BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254781004|ref|YP_003065417.1| threonyl-tRNA synthetase
[Candidatus Liberibacter asiaticus str. psy62]
         (652 letters)

Database: nr 
           14,124,377 sequences; 4,842,793,630 total letters

Searching..................................................done


Results from round 1


>gi|254781004|ref|YP_003065417.1| threonyl-tRNA synthetase [Candidatus Liberibacter asiaticus str.
           psy62]
 gi|254040681|gb|ACT57477.1| threonyl-tRNA synthetase [Candidatus Liberibacter asiaticus str.
           psy62]
          Length = 652

 Score = 1360 bits (3521), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 652/652 (100%), Positives = 652/652 (100%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIE 60
           MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIE
Sbjct: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIE 60

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA
Sbjct: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF
Sbjct: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE
Sbjct: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVL 300
           SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVL
Sbjct: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVL 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV
Sbjct: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF
Sbjct: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE
Sbjct: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE
Sbjct: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI
Sbjct: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK
Sbjct: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652


>gi|315122407|ref|YP_004062896.1| threonyl-tRNA synthetase [Candidatus Liberibacter solanacearum
           CLso-ZC1]
 gi|313495809|gb|ADR52408.1| threonyl-tRNA synthetase [Candidatus Liberibacter solanacearum
           CLso-ZC1]
          Length = 653

 Score = 1163 bits (3008), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 537/652 (82%), Positives = 599/652 (91%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIE 60
           MPS+I LTFPDG IKNFP H TG DVAESIS+S+AKKA+AVAING +CDLSD ++ GSIE
Sbjct: 1   MPSNITLTFPDGLIKNFPAHTTGYDVAESISKSIAKKAIAVAINGTICDLSDTIQTGSIE 60

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           IITPEDPRSL VIRHSCAHIMAEAVQSIWP+ QVAIGP+IE+GFYYDF++E+PFSSD+ A
Sbjct: 61  IITPEDPRSLVVIRHSCAHIMAEAVQSIWPKTQVAIGPVIENGFYYDFNREEPFSSDDFA 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IEKKM EI+ RDSPF K+ LS E+AR+LFESK E YK+EILE IPA+++VT+Y QGEW 
Sbjct: 121 KIEKKMHEIVTRDSPFCKKRLSREQARKLFESKNETYKLEILEKIPAEQDVTIYNQGEWL 180

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV+STGQ+KKFFKLMKVAGAYWRGD+ RPMLSRIYGTAWN+QQELTQYL F+ E
Sbjct: 181 DLCRGPHVQSTGQIKKFFKLMKVAGAYWRGDNTRPMLSRIYGTAWNSQQELTQYLDFIVE 240

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVL 300
           SEKRDHRK+AREMDLFH AEDGSGVIFWH+KGWK FQTLISYMRRKIKDDYEEINTPQVL
Sbjct: 241 SEKRDHRKIAREMDLFHTAEDGSGVIFWHQKGWKTFQTLISYMRRKIKDDYEEINTPQVL 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           DQ+LW+QSGHWD YRANMFAV+CAD+TIKDLR+FALKPMNCPGHV +F HGLKSYRELPV
Sbjct: 301 DQNLWKQSGHWDWYRANMFAVQCADETIKDLRSFALKPMNCPGHVEIFKHGLKSYRELPV 360

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF ECLKIHNLI+SIYKDFGF
Sbjct: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFEECLKIHNLIVSIYKDFGF 420

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           E I VKLSTRPEKRVGSDALWDDAE+IM+ VL+TIK SSQ +INTG+L GEGAFYGPKFE
Sbjct: 421 ENITVKLSTRPEKRVGSDALWDDAESIMQTVLNTIKTSSQSKINTGILPGEGAFYGPKFE 480

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           YILKDAIGR+WQCGT Q+DFNLP RFNAFY+NS SEKCHPVMIHRAVFGSIERFIGIMIE
Sbjct: 481 YILKDAIGREWQCGTTQIDFNLPHRFNAFYINSQSEKCHPVMIHRAVFGSIERFIGIMIE 540

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           NFKG+LPLWLSP+QA+VTTITSS++EYAQE+  LLKS+ LSIETDFRNE INYKIREHS 
Sbjct: 541 NFKGHLPLWLSPVQAVVTTITSSSIEYAQEVTALLKSNDLSIETDFRNEKINYKIREHSS 600

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           KKIP+IIICGDKE  ERSI IRR GS T+Q +++LDA+ ++T+ESLPPD  K
Sbjct: 601 KKIPLIIICGDKETQERSIVIRRLGSKTSQSLNILDAVQMITQESLPPDMIK 652


>gi|227821825|ref|YP_002825795.1| threonyl-tRNA synthetase [Sinorhizobium fredii NGR234]
 gi|254783532|sp|C3MB49|SYT_RHISN RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|227340824|gb|ACP25042.1| ThrS; threonyl-tRNA synthetase [Sinorhizobium fredii NGR234]
          Length = 661

 Score =  941 bits (2433), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 416/652 (63%), Positives = 534/652 (81%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIE 60
           M   + LTFPDGS++ F    TG DVAESIS+SLAKKAVA+A++G++ DLSDP+ +G IE
Sbjct: 1   MSHSVSLTFPDGSVREFAAGTTGRDVAESISKSLAKKAVAIALDGELRDLSDPIADGKIE 60

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           I+T ED R+L +IRH  AH+MAEAVQ +WP  QV IGP+I++GFYYDF K +PF+ D+L 
Sbjct: 61  IVTREDKRALELIRHDAAHVMAEAVQELWPGTQVTIGPVIDNGFYYDFAKNEPFTPDDLP 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEKKM+EIIAR++PF K+  S +KA+E+F +K E+YKVE++++IP  +++ +Y QG+WF
Sbjct: 121 VIEKKMKEIIARNNPFSKEVWSRDKAKEVFAAKGESYKVELVDAIPEGQDLKIYYQGDWF 180

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ STGQ+   FKLMKVAGAYWRGDSN PML+RIYGTAW+TQ+EL QYL+ L E
Sbjct: 181 DLCRGPHMASTGQIGTAFKLMKVAGAYWRGDSNNPMLTRIYGTAWHTQEELDQYLHVLAE 240

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVL 300
           +EKRDHR+L REMDLFH  E+G GV+FWH KGW++FQ+L++YMRR+++ DY+E+N PQVL
Sbjct: 241 AEKRDHRRLGREMDLFHFQEEGPGVVFWHGKGWRVFQSLVAYMRRRLEVDYQEVNAPQVL 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D+ LW+ SGHW  YR NMF V  A D   D R FALKPMNCPGH+ +F HGLKSYRELPV
Sbjct: 301 DKSLWETSGHWGWYRDNMFKVTVAGDETDDDRVFALKPMNCPGHIQIFKHGLKSYRELPV 360

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AEFG+V+R EPSG+LHGLMRVRGFTQDDAH+FCT EQM  ECLKI++LI+S+Y+DFGF
Sbjct: 361 RMAEFGAVHRYEPSGALHGLMRVRGFTQDDAHIFCTDEQMAAECLKINDLILSVYEDFGF 420

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           ++I+VKLSTRP+KRVGSDALWD AE +M  VL+TI+  S+ RI TG+L GEGAFYGPKFE
Sbjct: 421 KEIVVKLSTRPDKRVGSDALWDRAEAVMTDVLNTIEAQSEGRIKTGILPGEGAFYGPKFE 480

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           Y LKDAIGR+WQCGT QVDFNLP RF AFY++  SEK  PVMIHRA+ GS+ERF+GI++E
Sbjct: 481 YTLKDAIGREWQCGTTQVDFNLPERFGAFYIDKDSEKRQPVMIHRAICGSMERFLGILLE 540

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           N+ G++PLW+SP+Q +V TITS A +Y +E+A  L+   L++ETDFRNE INYKIREHS+
Sbjct: 541 NYAGHMPLWISPLQVVVATITSDADDYGREVAARLREAGLTVETDFRNEKINYKIREHSV 600

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
            K+P+I++CG +EA ERS+ IRR GS     +SL +A+  L+ E++ PD ++
Sbjct: 601 TKVPVIVVCGKREAEERSVNIRRLGSQAQTAMSLEEAVAALSSEAMAPDLKR 652


>gi|86357812|ref|YP_469704.1| threonyl-tRNA synthetase [Rhizobium etli CFN 42]
 gi|123765783|sp|Q2K859|SYT_RHIEC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|86281914|gb|ABC90977.1| threonyl-tRNA synthetase protein [Rhizobium etli CFN 42]
          Length = 668

 Score =  941 bits (2432), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 432/658 (65%), Positives = 525/658 (79%), Gaps = 6/658 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIE 60
           M   + LTFPDGS+++FP  ATG DVAESIS+SLAK AVA+AI+G V DLSD V +G IE
Sbjct: 1   MSQSVSLTFPDGSVRSFPAGATGRDVAESISKSLAKSAVAIAIDGGVRDLSDAVTDGKIE 60

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           IIT +DPR+L +IRH  AH+MAEAVQ +WP  QV IGP+IE+GFYYDF K +PF+ D+L 
Sbjct: 61  IITRKDPRALELIRHDAAHVMAEAVQELWPGTQVTIGPVIENGFYYDFAKNEPFTPDDLP 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IEKKM+EIIAR++PF KQ  S EKA+E+F +K E YKVE++++IP  +++ +Y QGEWF
Sbjct: 121 KIEKKMKEIIARNAPFTKQIWSREKAKEVFAAKGEQYKVELVDAIPEGQDLKIYHQGEWF 180

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ STGQV   FKLMKVAGAYWRGDSN  MLSRIYGTAW  Q +L  YL+ L E
Sbjct: 181 DLCRGPHMASTGQVGTAFKLMKVAGAYWRGDSNNAMLSRIYGTAWADQADLDNYLHMLAE 240

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVL 300
           +EKRDHRKL REMDLFH  E+G GV+FWH KGW+IFQTL++YMRR++  DYEE+N PQVL
Sbjct: 241 AEKRDHRKLGREMDLFHFQEEGPGVVFWHGKGWRIFQTLVAYMRRRLAIDYEEVNAPQVL 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKCA------DDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
           D  LW+ SGHW  Y+ NMF VK A      DD   D R FALKPMNCPGHV +F HGLKS
Sbjct: 301 DTSLWETSGHWGWYQENMFGVKSAHAMTHPDDKEADNRVFALKPMNCPGHVQIFKHGLKS 360

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YRELP+RLAEFG V+R EPSG+LHGLMRVRGFTQDDAH+FCT EQM  ECLKI++LI+S+
Sbjct: 361 YRELPIRLAEFGLVHRYEPSGALHGLMRVRGFTQDDAHIFCTDEQMAAECLKINDLILSV 420

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           Y+DFGF++I+VKLSTRPEKRVGSDALWD AE +M  VL TI+  S+ RI TG+L GEGAF
Sbjct: 421 YEDFGFKEIVVKLSTRPEKRVGSDALWDRAEAVMTDVLKTIEAQSEGRIKTGILPGEGAF 480

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPKFEY LKDAIGR+WQCGT QVDFNLP RF AFY++S+SEK  PVMIHRA+ GS+ERF
Sbjct: 481 YGPKFEYTLKDAIGREWQCGTTQVDFNLPERFGAFYIDSNSEKTQPVMIHRAICGSMERF 540

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
           +GI+IENF G++PLW+SP+Q +V TITS A  Y  E+A  L+   L++ETDFRNE INYK
Sbjct: 541 LGILIENFAGHMPLWVSPLQVVVATITSEADAYGLEVAEALREAGLNVETDFRNEKINYK 600

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           IREHS+ K+P+II+CG KEA +R++ IRR GS     + L  A+  L  E+ PPD ++
Sbjct: 601 IREHSVTKVPVIIVCGRKEAEDRTVNIRRLGSQDQVSMGLDTAVESLALEATPPDVRR 658


>gi|15965178|ref|NP_385531.1| threonyl-tRNA synthetase [Sinorhizobium meliloti 1021]
 gi|22654127|sp|Q92QB0|SYT_RHIME RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|15074358|emb|CAC46004.1| Probable threonyl-tRNA synthetase [Sinorhizobium meliloti 1021]
          Length = 661

 Score =  940 bits (2430), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 419/652 (64%), Positives = 530/652 (81%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIE 60
           M   + LTFPDGS++ F    TG DVAESIS+SLAKKAVA+AI+G++ DLSD V EG IE
Sbjct: 2   MSHSVSLTFPDGSVREFAAGTTGRDVAESISKSLAKKAVAIAISGELRDLSDAVTEGRIE 61

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           I+T ED R+L +IRH  AH+MAEAVQ +WP  QV IGP+I++GFYYDF K +PF+ D+L 
Sbjct: 62  IVTREDKRALELIRHDAAHVMAEAVQELWPGTQVTIGPVIDNGFYYDFAKNEPFTPDDLP 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEKKM+EIIAR+ PF K+  S ++A+E+F +K E YKVE++++IP  +++ +Y QG+WF
Sbjct: 122 VIEKKMREIIARNKPFTKEVWSRDRAKEVFAAKGENYKVELVDAIPEGQDLKIYYQGDWF 181

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ STGQ+   FKLMKVAGAYWRGDSN PML+RIYGTAW+TQ+EL QYL+ L E
Sbjct: 182 DLCRGPHMASTGQIGTAFKLMKVAGAYWRGDSNNPMLTRIYGTAWHTQEELDQYLHVLAE 241

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVL 300
           +EKRDHR+L REMDLFH  E+G GV+FWH KGW+IFQ+L++YMRR+++ DY+E+N PQVL
Sbjct: 242 AEKRDHRRLGREMDLFHFQEEGPGVVFWHGKGWRIFQSLVAYMRRRLEGDYQEVNAPQVL 301

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D+ LW+ SGHW  YR NMF V  A D   D R FALKPMNCPGH+ +F HGLKSYRELPV
Sbjct: 302 DKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHIQIFKHGLKSYRELPV 361

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLAEFG+V+R EPSG+LHGLMRVRGFTQDDAH+FCT EQM  ECLKI++LI+S+Y+DFGF
Sbjct: 362 RLAEFGAVHRYEPSGALHGLMRVRGFTQDDAHIFCTDEQMAAECLKINDLILSVYEDFGF 421

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           ++I+VKLSTRPEKRVGSD LWD AE +M  VL TI+  S+ RI TG+L GEGAFYGPKFE
Sbjct: 422 KEIVVKLSTRPEKRVGSDELWDRAEAVMTEVLQTIEEQSEGRIKTGILPGEGAFYGPKFE 481

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           Y LKDAIGR+WQCGT QVDFNLP RF AFY++S SEK  PVMIHRA+ GS+ERF+GI++E
Sbjct: 482 YTLKDAIGREWQCGTTQVDFNLPERFGAFYIDSESEKRQPVMIHRAICGSMERFLGILLE 541

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           N+ G++PLW+SP+Q +V TITS A +Y +E+A  L+   L++ETDFRNE INYK+REHS+
Sbjct: 542 NYAGHMPLWISPLQVVVATITSEADDYGREVAERLRDAGLTVETDFRNEKINYKVREHSV 601

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
            K+P+I++CG +EA ERS+ IRR GS     +SL +A+  L+ E++ PD ++
Sbjct: 602 TKVPVIVVCGRREAEERSVNIRRLGSQAQTAMSLDEAVASLSAEAMAPDLKR 653


>gi|150396275|ref|YP_001326742.1| threonyl-tRNA synthetase [Sinorhizobium medicae WSM419]
 gi|166225503|sp|A6U8C7|SYT_SINMW RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|150027790|gb|ABR59907.1| threonyl-tRNA synthetase [Sinorhizobium medicae WSM419]
          Length = 660

 Score =  940 bits (2429), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 420/652 (64%), Positives = 530/652 (81%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIE 60
           M   + LTFPDGS++ F    TG DVAESIS+SLAKK+VA+AI+G++ DLSDPV EG IE
Sbjct: 1   MSHSVSLTFPDGSVREFAPGTTGRDVAESISKSLAKKSVAIAIDGELRDLSDPVTEGRIE 60

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           I+T ED R+L +IRH  AH+MAEAVQ +WP  QV IGP+I++GFYYDF K +PF+ D+L 
Sbjct: 61  IVTREDKRALELIRHDAAHVMAEAVQELWPGTQVTIGPVIDNGFYYDFAKNEPFTPDDLP 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEK+M+EIIAR+ PF K+  S +KA+E+F  K E+YKVE++++IP  +++ +Y QG+WF
Sbjct: 121 VIEKRMREIIARNKPFTKEVWSRDKAKEVFAVKGESYKVELVDAIPEGQDLKIYYQGDWF 180

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ STGQ+   FKLMKVAGAYWRGDSN PML+RIYGTAW+TQ+EL QYL+ L E
Sbjct: 181 DLCRGPHMASTGQIGTAFKLMKVAGAYWRGDSNNPMLTRIYGTAWHTQEELDQYLHVLAE 240

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVL 300
           +EKRDHR+L REMDLFH  E+G GV+FWH KGW+IFQ+L++YMRR+++ DY+E+N PQVL
Sbjct: 241 AEKRDHRRLGREMDLFHFQEEGPGVVFWHGKGWRIFQSLVAYMRRRLEGDYQEVNAPQVL 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D+ LW+ SGHW  YR NMF V  A D   D R FALKPMNCPGH+ +F HGLKSYRELPV
Sbjct: 301 DKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHIQIFKHGLKSYRELPV 360

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLAEFG+V+R EPSG+LHGLMRVRGFTQDDAH+FCT EQM  ECLKI++LI+S+Y+DFGF
Sbjct: 361 RLAEFGAVHRYEPSGALHGLMRVRGFTQDDAHIFCTDEQMAAECLKINDLILSVYEDFGF 420

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           ++I+VKLSTRPEKRVGSD LWD AE +M  VL TI+  S+ RI TG+L GEGAFYGPKFE
Sbjct: 421 KEIVVKLSTRPEKRVGSDELWDRAEAVMTEVLKTIEAQSEGRIKTGILPGEGAFYGPKFE 480

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           Y LKDAIGR+WQCGT QVDFNLP RF AFY++S SEK  PVMIHRA+ GS+ERF+GI++E
Sbjct: 481 YTLKDAIGREWQCGTTQVDFNLPERFGAFYIDSESEKRQPVMIHRAICGSMERFLGILLE 540

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           NF G++PLW+SP+Q +V TITS A +Y +E+A  L+   L++ETDFRNE INYK+REHS+
Sbjct: 541 NFAGHMPLWISPLQVVVATITSEADDYGREVAERLRDAGLTVETDFRNEKINYKVREHSV 600

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
            K+P+I++CG +EA ERS+ IRR GS     +SL +A+  L+ E+  PD ++
Sbjct: 601 TKVPVIVVCGKREAEERSVNIRRLGSQAQTAMSLDEAVASLSAEATAPDLKR 652


>gi|307321522|ref|ZP_07600917.1| threonyl-tRNA synthetase [Sinorhizobium meliloti AK83]
 gi|306892829|gb|EFN23620.1| threonyl-tRNA synthetase [Sinorhizobium meliloti AK83]
          Length = 660

 Score =  940 bits (2429), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 419/652 (64%), Positives = 530/652 (81%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIE 60
           M   + LTFPDGS++ F    TG DVAESIS+SLAKKAVA+AI+G++ DLSD V EG IE
Sbjct: 1   MSHSVSLTFPDGSVREFAAGTTGRDVAESISKSLAKKAVAIAISGELRDLSDAVTEGRIE 60

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           I+T ED R+L +IRH  AH+MAEAVQ +WP  QV IGP+I++GFYYDF K +PF+ D+L 
Sbjct: 61  IVTREDKRALELIRHDAAHVMAEAVQELWPGTQVTIGPVIDNGFYYDFAKNEPFTPDDLP 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEKKM+EIIAR+ PF K+  S ++A+E+F +K E YKVE++++IP  +++ +Y QG+WF
Sbjct: 121 VIEKKMREIIARNKPFTKEVWSRDRAKEVFAAKGENYKVELVDAIPEGQDLKIYYQGDWF 180

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ STGQ+   FKLMKVAGAYWRGDSN PML+RIYGTAW+TQ+EL QYL+ L E
Sbjct: 181 DLCRGPHMASTGQIGTAFKLMKVAGAYWRGDSNNPMLTRIYGTAWHTQEELDQYLHVLAE 240

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVL 300
           +EKRDHR+L REMDLFH  E+G GV+FWH KGW+IFQ+L++YMRR+++ DY+E+N PQVL
Sbjct: 241 AEKRDHRRLGREMDLFHFQEEGPGVVFWHGKGWRIFQSLVAYMRRRLEGDYQEVNAPQVL 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D+ LW+ SGHW  YR NMF V  A D   D R FALKPMNCPGH+ +F HGLKSYRELPV
Sbjct: 301 DKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHIQIFKHGLKSYRELPV 360

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLAEFG+V+R EPSG+LHGLMRVRGFTQDDAH+FCT EQM  ECLKI++LI+S+Y+DFGF
Sbjct: 361 RLAEFGAVHRYEPSGALHGLMRVRGFTQDDAHIFCTDEQMAAECLKINDLILSVYEDFGF 420

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           ++I+VKLSTRPEKRVGSD LWD AE +M  VL TI+  S+ RI TG+L GEGAFYGPKFE
Sbjct: 421 KEIVVKLSTRPEKRVGSDELWDRAEAVMTEVLQTIEEQSEGRIKTGILPGEGAFYGPKFE 480

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           Y LKDAIGR+WQCGT QVDFNLP RF AFY++S SEK  PVMIHRA+ GS+ERF+GI++E
Sbjct: 481 YTLKDAIGREWQCGTTQVDFNLPERFGAFYIDSESEKRQPVMIHRAICGSMERFLGILLE 540

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           N+ G++PLW+SP+Q +V TITS A +Y +E+A  L+   L++ETDFRNE INYK+REHS+
Sbjct: 541 NYAGHMPLWISPLQVVVATITSEADDYGREVAERLRDAGLTVETDFRNEKINYKVREHSV 600

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
            K+P+I++CG +EA ERS+ IRR GS     +SL +A+  L+ E++ PD ++
Sbjct: 601 TKVPVIVVCGRREAEERSVNIRRLGSQAQTAMSLDEAVASLSAEAMAPDLKR 652


>gi|190891876|ref|YP_001978418.1| threonyl-tRNA synthetase [Rhizobium etli CIAT 652]
 gi|238692487|sp|B3PNV4|SYT_RHIE6 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|190697155|gb|ACE91240.1| threonyl-tRNA synthetase protein [Rhizobium etli CIAT 652]
          Length = 668

 Score =  939 bits (2427), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 432/658 (65%), Positives = 526/658 (79%), Gaps = 6/658 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIE 60
           M   I LTFPDGS+++FP  ATG DVAESIS+SLAK AVA+AI+G V DLSD V +G IE
Sbjct: 1   MSQAISLTFPDGSVRSFPAGATGKDVAESISKSLAKSAVAIAIDGAVRDLSDAVTDGKIE 60

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           IIT +D R+L +IRH  AH+MAEAVQ +WP  QV IGP+IE+GFYYDF K +PF+ D+L 
Sbjct: 61  IITRKDGRALELIRHDAAHVMAEAVQELWPGTQVTIGPVIENGFYYDFAKNEPFTPDDLP 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IEKKM+EIIAR++PF KQ  S EKA+E+F +K E YKVE++++IP  +++ +Y QG+WF
Sbjct: 121 KIEKKMKEIIARNAPFTKQIWSREKAKEVFAAKGEQYKVELVDAIPEGQDLKIYHQGDWF 180

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ STGQV   FKLMKVAGAYWRGDSN  MLSRIYGTAW  Q +L  YL+ L E
Sbjct: 181 DLCRGPHMASTGQVGTAFKLMKVAGAYWRGDSNNAMLSRIYGTAWADQADLDNYLHMLAE 240

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVL 300
           +EKRDHRKL REMDLFH  E+G GV+FWH KGW+IFQTL++YMRR++  DY+E+N PQVL
Sbjct: 241 AEKRDHRKLGREMDLFHFQEEGPGVVFWHGKGWRIFQTLVAYMRRRLAADYQEVNAPQVL 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKCA------DDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
           D  LW+ SGHW  Y+ NMFAVK A      +D   D R FALKPMNCPGHV +F HGLKS
Sbjct: 301 DTSLWETSGHWGWYQENMFAVKSAHAMTHPEDKEADNRVFALKPMNCPGHVQIFKHGLKS 360

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YRELP+RLAEFG V+R EPSG+LHGLMRVRGFTQDDAH+FCT EQM  ECLKI++LI+S+
Sbjct: 361 YRELPIRLAEFGLVHRYEPSGALHGLMRVRGFTQDDAHIFCTDEQMAAECLKINDLILSV 420

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           Y+DFGF++I+VKLSTRPEKRVGSDALWD AE +M  VL TI+  S+ RI TG+L GEGAF
Sbjct: 421 YEDFGFKEIVVKLSTRPEKRVGSDALWDRAEAVMTDVLKTIEAQSEGRIKTGILPGEGAF 480

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPKFEY LKDAIGR+WQCGT QVDFNLP RF AFY++S+SEK  PVMIHRA+ GS+ERF
Sbjct: 481 YGPKFEYTLKDAIGREWQCGTTQVDFNLPERFGAFYIDSNSEKTQPVMIHRAICGSMERF 540

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
           +GI+IENF G++PLW+SP+Q +V TITS A  Y  E+A  L+   L++ETDFRNE INYK
Sbjct: 541 LGILIENFAGHMPLWVSPLQVVVATITSEADAYGLEVAEALRDAGLNVETDFRNEKINYK 600

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           IREHS+ K+P+II+CG KEA ER++ IRR GS     + L  A+  LT E+ PPD ++
Sbjct: 601 IREHSVTKVPVIIVCGRKEAEERTVNIRRLGSQDQVSMGLDAAVESLTLEATPPDIRR 658


>gi|327188321|gb|EGE55539.1| threonyl-tRNA synthetase protein [Rhizobium etli CNPAF512]
          Length = 668

 Score =  938 bits (2424), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 432/655 (65%), Positives = 524/655 (80%), Gaps = 6/655 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIE 60
           M   I LTFPDGS+++FP  ATG DVAESIS+SLAK AVA+AI+G V DLSD V +G IE
Sbjct: 1   MSQAISLTFPDGSVRSFPAGATGKDVAESISKSLAKSAVAIAIDGAVRDLSDAVTDGKIE 60

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           IIT +D R+L +IRH  AH+MAEAVQ +WP  QV IGP+IE+GFYYDF K +PF+ D+L 
Sbjct: 61  IITRKDGRALELIRHDAAHVMAEAVQELWPGTQVTIGPVIENGFYYDFAKNEPFTPDDLP 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IEKKM+EIIAR++PF KQ  S EKA+E+F +K E YKVE++++IP  +++ +Y QG+WF
Sbjct: 121 KIEKKMKEIIARNAPFTKQIWSREKAKEVFAAKGEQYKVELVDAIPEGQDLKIYHQGDWF 180

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ STGQV   FKLMKVAGAYWRGDSN  MLSRIYGTAW  Q +L  YL+ L E
Sbjct: 181 DLCRGPHMASTGQVGTAFKLMKVAGAYWRGDSNNAMLSRIYGTAWADQADLDNYLHMLAE 240

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVL 300
           +EKRDHRKL REMDLFH  E+G GV+FWH KGW+IFQTL++YMRR++  DY+E+N PQVL
Sbjct: 241 AEKRDHRKLGREMDLFHFQEEGPGVVFWHGKGWRIFQTLVAYMRRRLAADYQEVNAPQVL 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKCA------DDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
           D  LW+ SGHW  Y+ NMFAVK A      +D   D R FALKPMNCPGHV +F HGLKS
Sbjct: 301 DTSLWETSGHWGWYQENMFAVKSAHAMTHPEDKEADNRVFALKPMNCPGHVQIFKHGLKS 360

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YRELP+RLAEFG V+R EPSG+LHGLMRVRGFTQDDAH+FCT EQM  ECLKI++LI+S+
Sbjct: 361 YRELPIRLAEFGLVHRYEPSGALHGLMRVRGFTQDDAHIFCTDEQMAAECLKINDLILSV 420

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           Y+DFGF++I+VKLSTRPEKRVGSDALWD AE +M  VL TI+  S+ RI TG+L GEGAF
Sbjct: 421 YEDFGFKEIVVKLSTRPEKRVGSDALWDRAEAVMTDVLKTIEAQSEGRIKTGILPGEGAF 480

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPKFEY LKDAIGR+WQCGT QVDFNLP RF AFY++S+SEK  PVMIHRA+ GS+ERF
Sbjct: 481 YGPKFEYTLKDAIGREWQCGTTQVDFNLPERFGAFYIDSNSEKTQPVMIHRAICGSMERF 540

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
           +GI+IENF G++PLW+SP+Q +V TITS A  Y  E+A  L+   L++ETDFRNE INYK
Sbjct: 541 LGILIENFAGHMPLWVSPLQVVVATITSEADAYGLEVAEALRDAGLNVETDFRNEKINYK 600

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPD 649
           IREHS+ K+P+II+CG KEA ER++ IRR GS     + L  A+  LT E+ PPD
Sbjct: 601 IREHSVTKVPVIIVCGRKEAEERTVNIRRLGSQDQVSMELDAAVESLTLEATPPD 655


>gi|222086050|ref|YP_002544582.1| threonyl-tRNA synthetase [Agrobacterium radiobacter K84]
 gi|254783503|sp|B9JFG4|SYT_AGRRK RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|221723498|gb|ACM26654.1| threonyl-tRNA synthetase [Agrobacterium radiobacter K84]
          Length = 662

 Score =  937 bits (2423), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 424/650 (65%), Positives = 522/650 (80%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIE 60
           M   + LTFPDGS++++   ATG DVAESIS+SLAKKAVA+AI+G V DLS+PV +G IE
Sbjct: 1   MSQSVSLTFPDGSVRSYDAGATGRDVAESISKSLAKKAVAIAIDGTVRDLSEPVADGKIE 60

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           IIT  D R+L +IRH  AH+MAEAVQ +WP  QV IGP+IE+GFYYDF K +PF+ D+L 
Sbjct: 61  IITRNDDRALELIRHDAAHVMAEAVQELWPGTQVTIGPVIENGFYYDFAKNEPFTPDDLP 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEKKM+EII R+ PF +Q  S EKA+++F  K E YKVE++++IP  +++ +Y QG+WF
Sbjct: 121 VIEKKMREIIQRNKPFTRQIWSREKAKQVFADKGERYKVELVDAIPEGQDLKIYYQGDWF 180

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ STGQ+   FKLMKVAGAYWRGDSN PML+RIYGTA+  Q +L  YL+ L E
Sbjct: 181 DLCRGPHMASTGQIGTAFKLMKVAGAYWRGDSNNPMLTRIYGTAFAEQADLDNYLHILAE 240

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVL 300
           +EKRDHR+L REMDLFH  E+G GV+FWH KGW+IFQTL+SYMRR+++ DY+E+N PQVL
Sbjct: 241 AEKRDHRRLGREMDLFHFQEEGPGVVFWHGKGWRIFQTLVSYMRRRLEGDYQEVNAPQVL 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D+ LW+ SGHW  YR NMF V  A D   D R FALKPMNCPGH+ +F HGLKSYRELP+
Sbjct: 301 DKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHIQIFKHGLKSYRELPI 360

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLAEFG+V+R EPSG+LHGLMRVRGFTQDDAH+FCT EQM  ECLKI++LI+S+Y+DFGF
Sbjct: 361 RLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTDEQMAAECLKINDLILSVYEDFGF 420

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           E+++VKLSTRPEKRVG DALWD AE++M  VL TI+  S  RI TG+L GEGAFYGPKFE
Sbjct: 421 EEVVVKLSTRPEKRVGDDALWDRAESVMMEVLKTIEAQSGGRIKTGILPGEGAFYGPKFE 480

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           Y LKDAIGR+WQCGT QVDFNLP RF AFY++ HSEK  PVMIHRA+ GS+ERF+GI+IE
Sbjct: 481 YTLKDAIGREWQCGTTQVDFNLPERFGAFYIDQHSEKTQPVMIHRAICGSMERFLGILIE 540

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           NF G++PLW+SP+Q +V TITS A  Y +E+A  L+   L++ETDFRNE INYKIREHS+
Sbjct: 541 NFAGHMPLWVSPLQVVVATITSEADGYGEEVAEALRDAGLTVETDFRNEKINYKIREHSV 600

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDC 650
            K+P+II+CG KEA ERS+ IRR GS     +SL +AI  L+ E+ PPD 
Sbjct: 601 TKVPVIIVCGKKEAEERSVNIRRLGSQAQTAMSLDEAIASLSLEATPPDV 650


>gi|307309192|ref|ZP_07588863.1| threonyl-tRNA synthetase [Sinorhizobium meliloti BL225C]
 gi|306900338|gb|EFN30954.1| threonyl-tRNA synthetase [Sinorhizobium meliloti BL225C]
          Length = 660

 Score =  937 bits (2422), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 418/652 (64%), Positives = 529/652 (81%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIE 60
           M   + LTFPDGS++ F    TG DVAESIS+SLAKKAVA+AI+G++ DLSD V EG IE
Sbjct: 1   MSHSVSLTFPDGSVREFAAGTTGRDVAESISKSLAKKAVAIAISGELRDLSDAVTEGRIE 60

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           I+T ED R+L +IRH  AH+MAEAVQ +WP  QV IGP+I++GFYYDF K +PF+ D+L 
Sbjct: 61  IVTREDKRALELIRHDAAHVMAEAVQELWPGTQVTIGPVIDNGFYYDFAKNEPFTPDDLP 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEKKM+EIIAR+ PF K+  S ++A+E+F +K E YKVE++++IP  +++ +Y QG+WF
Sbjct: 121 VIEKKMREIIARNKPFTKEVWSRDRAKEVFAAKGENYKVELVDAIPEGQDLKIYYQGDWF 180

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ STGQ+   FKLMKVAGAYWRGDSN  ML+RIYGTAW+TQ+EL QYL+ L E
Sbjct: 181 DLCRGPHMASTGQIGTAFKLMKVAGAYWRGDSNNTMLTRIYGTAWHTQEELDQYLHVLAE 240

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVL 300
           +EKRDHR+L REMDLFH  E+G GV+FWH KGW+IFQ+L++YMRR+++ DY+E+N PQVL
Sbjct: 241 AEKRDHRRLGREMDLFHFQEEGPGVVFWHGKGWRIFQSLVAYMRRRLEGDYQEVNAPQVL 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D+ LW+ SGHW  YR NMF V  A D   D R FALKPMNCPGH+ +F HGLKSYRELPV
Sbjct: 301 DKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHIQIFKHGLKSYRELPV 360

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLAEFG+V+R EPSG+LHGLMRVRGFTQDDAH+FCT EQM  ECLKI++LI+S+Y+DFGF
Sbjct: 361 RLAEFGAVHRYEPSGALHGLMRVRGFTQDDAHIFCTDEQMAAECLKINDLILSVYEDFGF 420

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           ++I+VKLSTRPEKRVGSD LWD AE +M  VL TI+  S+ RI TG+L GEGAFYGPKFE
Sbjct: 421 KEIVVKLSTRPEKRVGSDELWDRAEAVMTEVLQTIEEQSEGRIKTGILPGEGAFYGPKFE 480

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           Y LKDAIGR+WQCGT QVDFNLP RF AFY++S SEK  PVMIHRA+ GS+ERF+GI++E
Sbjct: 481 YTLKDAIGREWQCGTTQVDFNLPERFGAFYIDSESEKRQPVMIHRAICGSMERFLGILLE 540

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           N+ G++PLW+SP+Q +V TITS A +Y +E+A  L+   L++ETDFRNE INYK+REHS+
Sbjct: 541 NYAGHMPLWISPLQVVVATITSEADDYGREVAERLRDAGLTVETDFRNEKINYKVREHSV 600

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
            K+P+I++CG +EA ERS+ IRR GS     +SL +A+  L+ E++ PD ++
Sbjct: 601 TKVPVIVVCGRREAEERSVNIRRLGSQAQTAMSLDEAVASLSAEAMAPDLKR 652


>gi|209549439|ref|YP_002281356.1| threonyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|238065117|sp|B5ZQK2|SYT_RHILW RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|209535195|gb|ACI55130.1| threonyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 668

 Score =  936 bits (2420), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 433/656 (66%), Positives = 523/656 (79%), Gaps = 6/656 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIE 60
           M   I LTFPDGS+++FP  ATG DVAESIS+SLAK AVA+AI+G V DLSD V +G IE
Sbjct: 1   MSEAIFLTFPDGSVRSFPAGATGRDVAESISKSLAKSAVAIAIDGTVQDLSDTVADGKIE 60

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           IIT +D R+L +IRH  AH+MAEAVQ +WP  QV IGP+IE+GFYYDF K +PF+ D+L 
Sbjct: 61  IITRKDGRALELIRHDAAHVMAEAVQELWPGTQVTIGPVIENGFYYDFAKNEPFTPDDLP 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IEKKM+EIIAR++PF KQ  S EKA+E+F +K E YKVE++++IPA +++ +Y QG+WF
Sbjct: 121 KIEKKMKEIIARNAPFTKQIWSREKAKEVFAAKGENYKVELVDAIPAGQDLKIYNQGDWF 180

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ STGQV   FKLMKVAGAYWRGDSN  MLSRIYGTAW  Q +L  YL+ L E
Sbjct: 181 DLCRGPHMASTGQVGTAFKLMKVAGAYWRGDSNNAMLSRIYGTAWADQADLDNYLHMLAE 240

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVL 300
           +EKRDHRKL REMDLFH  E+G GV+FWH KGW+IFQ L+SYMRR++  DYEE+N PQVL
Sbjct: 241 AEKRDHRKLGREMDLFHFQEEGPGVVFWHGKGWRIFQALVSYMRRRLAVDYEEVNAPQVL 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKCA------DDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
           D  LW+ SGHW  Y+ NMFAVK A      +D   D R FALKPMNCPGHV +F HGLKS
Sbjct: 301 DTALWETSGHWGWYQENMFAVKSAHAMTHPEDKEADNRVFALKPMNCPGHVQIFKHGLKS 360

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YRELP+RLAEFG V+R EPSG+LHGLMRVRGFTQDDAH+FCT EQM  ECLKI++LI+S+
Sbjct: 361 YRELPIRLAEFGLVHRYEPSGALHGLMRVRGFTQDDAHIFCTDEQMAAECLKINDLILSV 420

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           Y+DFGF++I+VKLSTRPEKRVGSDALWD AE +M  VL TI+  S+ RI TG+L GEGAF
Sbjct: 421 YEDFGFKEIVVKLSTRPEKRVGSDALWDRAEAVMTDVLKTIEAQSEGRIKTGILPGEGAF 480

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPKFEY LKDAIGR+WQCGT QVDFNLP RF AFY++S+SEK  PVMIHRA+ GS+ERF
Sbjct: 481 YGPKFEYTLKDAIGREWQCGTTQVDFNLPERFGAFYIDSNSEKTQPVMIHRAICGSMERF 540

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
           +GI+IENF G+LPLW+SP+Q +V TITS A  Y  E+A  L+   L++ETDFRNE INYK
Sbjct: 541 LGILIENFAGHLPLWVSPLQVVVATITSEADAYGLEVAEALREAGLNVETDFRNEKINYK 600

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDC 650
           +REHS+ K+P+II+CG KEA ER++ IRR GS     + L  A+  L  E+ PPD 
Sbjct: 601 VREHSVTKVPVIIVCGRKEAEERTVNIRRLGSQDQVSMGLDAAVDSLALEATPPDV 656


>gi|241204765|ref|YP_002975861.1| threonyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240858655|gb|ACS56322.1| threonyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 661

 Score =  929 bits (2401), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 422/652 (64%), Positives = 521/652 (79%), Gaps = 1/652 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIE 60
           M   I LTFPDGS++ +   ATG DVAESIS+SLAKKAVAVAI+G V DLSDPV  G IE
Sbjct: 1   MSQAISLTFPDGSVRGYDAGATGRDVAESISKSLAKKAVAVAIDGTVRDLSDPVTTGRIE 60

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           IIT  D R+L +IRH  AH+MAEAVQ IWP  QV IGP+IE+GFYYDF K +PF+ D+L 
Sbjct: 61  IITRNDDRALELIRHDAAHVMAEAVQEIWPGTQVTIGPVIENGFYYDFAKNEPFTLDDLP 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IEKKM+EIIAR++ F KQ  S EKA+++F  K E YKVE++++IP  +++ +Y QG+WF
Sbjct: 121 KIEKKMKEIIARNAAFTKQVWSREKAKQVFADKGEQYKVELVDAIPEGQDLKIYYQGDWF 180

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ STGQ+   FKL+KVAGAYWRGDSN PMLSRIYGTA+  Q EL  YL+ L E
Sbjct: 181 DLCRGPHMASTGQIGSAFKLLKVAGAYWRGDSNNPMLSRIYGTAFAEQSELDNYLHMLAE 240

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVL 300
           +EKRDHR+L REMDLFH  E+G GV+FWH KGW++FQTL++YMRR++  DY+E+N PQVL
Sbjct: 241 AEKRDHRRLGREMDLFHFQEEGPGVVFWHGKGWRVFQTLVAYMRRRLAGDYQEVNAPQVL 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D+ LW+ SGHW  YR NMF V  A D   D R FALKPMNCPGH+ +F HGLKSYRELP+
Sbjct: 301 DKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHIQIFKHGLKSYRELPI 360

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLAEFG+V+R EPSG+LHGLMRVRGFTQDDAH+FCT EQM  ECLKI++LI+S+YKDFGF
Sbjct: 361 RLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTDEQMAAECLKINDLILSVYKDFGF 420

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           +++ +KLSTRP+KRVGSD LWD AE++M GVL+TI+  S + I TG+L GEGAFYGPKFE
Sbjct: 421 DEVTIKLSTRPDKRVGSDDLWDRAESVMMGVLETIQQQSNN-IKTGILPGEGAFYGPKFE 479

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           Y LKDAIGR+WQCGT QVDFNLP RF AFY++S+SEK  PVMIHRA+ GS+ERF+GI+IE
Sbjct: 480 YTLKDAIGREWQCGTTQVDFNLPERFGAFYIDSNSEKTQPVMIHRAICGSMERFLGILIE 539

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           NF G++PLW+SP+Q +V TITS A  Y  E+A  L+   L++ETDFRNE INYK+REHS+
Sbjct: 540 NFAGHMPLWVSPLQVVVATITSEADAYGLEVAEALREAGLNVETDFRNEKINYKVREHSV 599

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
            K+P+II+CG KEA ER++ IRR GS     + L  A+  L  E+ PPD ++
Sbjct: 600 TKVPVIIVCGRKEAEERTVNIRRLGSQDQVSMGLDAAVESLALEATPPDIRR 651


>gi|325293128|ref|YP_004278992.1| Threonyl-tRNA synthetase [Agrobacterium sp. H13-3]
 gi|325060981|gb|ADY64672.1| Threonyl-tRNA synthetase [Agrobacterium sp. H13-3]
          Length = 667

 Score =  927 bits (2396), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 417/658 (63%), Positives = 527/658 (80%), Gaps = 6/658 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIE 60
           M   + LTFPDGS++++P   TG +VAESIS+SLAKKAVA+A++G V DLS+ + +G IE
Sbjct: 1   MSQTVSLTFPDGSVRSYPAGTTGREVAESISKSLAKKAVAIALDGTVRDLSEAITDGKIE 60

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           I+T ED R+L +IRH  AH+MAEAVQ +WP  QV IGP+IE+GFYYDF K +PF+ ++L 
Sbjct: 61  IVTREDSRALELIRHDAAHVMAEAVQELWPGTQVTIGPVIENGFYYDFAKNEPFTPEDLP 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IEK+M+EII R+ PF ++  S EKA+E+F +K E YKVE++++IP  +++ +Y QG+WF
Sbjct: 121 KIEKRMKEIIQRNKPFTREVWSREKAKEVFAAKGENYKVELVDAIPEGQDLKIYYQGDWF 180

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ STGQV   FKLMKVAGAYWRGDSN  MLSRIYGTAW TQ+EL  YL+ L E
Sbjct: 181 DLCRGPHMASTGQVGTAFKLMKVAGAYWRGDSNNAMLSRIYGTAWATQEELDNYLHVLAE 240

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVL 300
           +EKRDHR+L REMDLFH  E+G GV+FWH KGW++FQTL +YMRR++ + Y+E+N PQVL
Sbjct: 241 AEKRDHRRLGREMDLFHFQEEGPGVVFWHGKGWRMFQTLTAYMRRRLANTYQEVNAPQVL 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKCA------DDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
           D+ LW+ SGHW  Y+ NMFAVK A      DD   D R FALKPMNCPGHV +F HGLKS
Sbjct: 301 DKSLWETSGHWGWYQENMFAVKSAHAFTHPDDEDADQRVFALKPMNCPGHVQIFKHGLKS 360

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YRE+PVRLAEFG+V+R E SG+LHGLMRVRGFTQDDAHVFCT+EQM  ECL+I++LI+S+
Sbjct: 361 YREMPVRLAEFGNVHRYEASGALHGLMRVRGFTQDDAHVFCTEEQMAAECLRINDLILSV 420

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           Y+DFGF +I+VKLSTRPEKRVGSD LWD AE++M  VL TI+  S  RI TG+L GEGAF
Sbjct: 421 YEDFGFSEIVVKLSTRPEKRVGSDDLWDRAESVMMEVLKTIEEQSGGRIKTGILPGEGAF 480

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPKFEY LKDAIGR+WQCGT QVDFNLP RF AFY++ +SEK  PVMIHRA+ GS+ERF
Sbjct: 481 YGPKFEYTLKDAIGREWQCGTTQVDFNLPERFGAFYIDQNSEKTQPVMIHRAICGSMERF 540

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
           +GI+IENF G++PLW +P+Q +V TITS A +Y +E+A  L+   +++ETDFRNE INYK
Sbjct: 541 LGILIENFAGHMPLWFAPLQVVVATITSDADDYGREVAEALREAGMAVETDFRNEKINYK 600

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           +REHS+ K+P+II+CG KEA ER++ IRR GS     +SL DAI  L +E+ PPD ++
Sbjct: 601 VREHSVTKVPVIIVCGRKEAEERTVNIRRLGSQNQTPMSLEDAITSLVEEATPPDVKR 658


>gi|15889049|ref|NP_354730.1| threonyl-tRNA synthetase [Agrobacterium tumefaciens str. C58]
 gi|22654115|sp|Q8UEL1|SYT_AGRT5 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|15156846|gb|AAK87515.1| threonyl-tRNA synthetase [Agrobacterium tumefaciens str. C58]
          Length = 667

 Score =  924 bits (2389), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 416/658 (63%), Positives = 526/658 (79%), Gaps = 6/658 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIE 60
           M   I LTFPDGS++++P   TG +VAESIS+SLAKKAVA+A++G V DLS+ + +G IE
Sbjct: 1   MSEAISLTFPDGSVRSYPAGTTGREVAESISKSLAKKAVAIALDGTVRDLSETITDGKIE 60

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           I+T ED R+L +IRH  AH+MAEAVQ +WP  QV IGP+IE+GFYYDF K +PF+ ++L 
Sbjct: 61  IVTREDGRALELIRHDAAHVMAEAVQELWPGTQVTIGPVIENGFYYDFAKNEPFTPEDLP 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IEK+M+EII R+ PF ++  S EKA+E+F +K E YKVE++++IP  +++ +Y QG+WF
Sbjct: 121 KIEKRMKEIIQRNKPFTREIWSREKAKEVFAAKGENYKVELVDAIPEGQDLKIYYQGDWF 180

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ STGQ+   FKLMKVAGAYWRGDSN  MLSRIYGTAW TQ+EL  YL+ L E
Sbjct: 181 DLCRGPHMASTGQIGTAFKLMKVAGAYWRGDSNNAMLSRIYGTAWATQEELDNYLHVLAE 240

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVL 300
           +EKRDHR+L REMDLFH  E+G GV+FWH KGW++FQTL +YMRR++ + Y+E+N PQVL
Sbjct: 241 AEKRDHRRLGREMDLFHFQEEGPGVVFWHGKGWRMFQTLTAYMRRRLANTYQEVNAPQVL 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKCA------DDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
           D+ LW+ SGHW  Y+ NMFAVK A      DD   D R FALKPMNCPGHV +F HGLKS
Sbjct: 301 DKSLWETSGHWGWYQENMFAVKSAHAFTHPDDKEADQRVFALKPMNCPGHVQIFKHGLKS 360

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YRE+PVRLAEFG+V+R E SG+LHGLMRVRGFTQDDAHVFCT+EQM  ECL+I++LI+S+
Sbjct: 361 YREMPVRLAEFGNVHRYEASGALHGLMRVRGFTQDDAHVFCTEEQMAAECLRINDLILSV 420

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           Y+DFGF +I+VKLSTRPEKRVGSD LWD AE++M  VL TI+  S  RI TG+L GEGAF
Sbjct: 421 YEDFGFSEIVVKLSTRPEKRVGSDDLWDRAESVMLEVLKTIEEQSGGRIKTGILPGEGAF 480

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPKFEY LKDAIGR+WQCGT QVDFNLP RF AFY++ +SEK  PVMIHRA+ GS+ERF
Sbjct: 481 YGPKFEYTLKDAIGREWQCGTTQVDFNLPERFGAFYIDQNSEKTQPVMIHRAICGSMERF 540

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
           +GI+IENF G++PLW +P+Q +V TITS A +Y +E+A  L+   +++ETDFRNE INYK
Sbjct: 541 LGILIENFAGHMPLWFAPLQVVVATITSDADDYGREVAEALREAGMAVETDFRNEKINYK 600

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           +REHS+ K+P+II+CG KEA ER++ IRR GS     +SL +AI  L  E+ PPD ++
Sbjct: 601 VREHSVTKVPVIIVCGRKEAEERTVNIRRLGSQNQTSMSLEEAITSLVDEATPPDVKR 658


>gi|116252274|ref|YP_768112.1| threonyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae 3841]
 gi|123261550|sp|Q1MGA7|SYT_RHIL3 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|115256922|emb|CAK08016.1| putative threonyl-tRNA synthetase [Rhizobium leguminosarum bv.
           viciae 3841]
          Length = 661

 Score =  924 bits (2387), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 419/649 (64%), Positives = 519/649 (79%), Gaps = 1/649 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIE 60
           M   I LTFPDGS++ +   ATG DVAESIS+SLAKKAVAVAI+G V DLSDPV  G IE
Sbjct: 1   MSQAISLTFPDGSVRGYDAGATGRDVAESISKSLAKKAVAVAIDGTVRDLSDPVTTGRIE 60

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           IIT  D R+L +IRH  AH+MAEAVQ +WP  QV IGP+IE+GFYYDF K +PF+ D+L 
Sbjct: 61  IITRNDDRALELIRHDAAHVMAEAVQELWPGTQVTIGPVIENGFYYDFAKNEPFTLDDLP 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IEKKM+EIIAR++ F KQ  S ++A+++F  K E YKVE++++IP  +++ +Y QG+WF
Sbjct: 121 KIEKKMKEIIARNAAFTKQVWSRDRAKQVFADKGEQYKVELVDAIPEGQDLKIYYQGDWF 180

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ STGQ+   FKL+KVAGAYWRGDSN PMLSRIYGTA+  Q EL  YL+ L E
Sbjct: 181 DLCRGPHMASTGQIGSAFKLLKVAGAYWRGDSNNPMLSRIYGTAFAEQSELDNYLHMLAE 240

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVL 300
           +EKRDHR+L REMDLFH  E+G GV+FWH KGW++FQTL++YMRR++  DY+E+N PQVL
Sbjct: 241 AEKRDHRRLGREMDLFHFQEEGPGVVFWHGKGWRVFQTLVAYMRRRLAGDYQEVNAPQVL 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D+ LW+ SGHW  YR +MF V  A D   D R FALKPMNCPGH+ +F HGLKSYRELP+
Sbjct: 301 DKSLWETSGHWGWYRDSMFKVTVAGDDTDDDRVFALKPMNCPGHIQIFKHGLKSYRELPI 360

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLAEFG+V+R EPSG+LHGLMRVRGFTQDDAH+FCT EQM  ECLKI++LI+S+YKDFGF
Sbjct: 361 RLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTDEQMAAECLKINDLILSVYKDFGF 420

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           +++ +KLSTRP+KRVGSD LWD AE++M GVL+TI+  S + I TG+L GEGAFYGPKFE
Sbjct: 421 DEVTIKLSTRPDKRVGSDELWDRAESVMMGVLETIQQQSNN-IKTGILPGEGAFYGPKFE 479

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           Y LKDAIGR+WQCGT QVDFNLP RF AFY++S+SEK  PVMIHRA+ GS+ERF+GI+IE
Sbjct: 480 YTLKDAIGREWQCGTTQVDFNLPERFGAFYIDSNSEKTQPVMIHRAICGSMERFLGILIE 539

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           NF G++PLW+SP+Q +V TITS A  Y  E+A  L+   L++ETDFRNE INYKIREHS+
Sbjct: 540 NFAGHMPLWVSPLQVVVATITSEADAYGLEVAEALREAGLNVETDFRNEKINYKIREHSV 599

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPD 649
            K+P+II+CG KEA ER++ IRR GS     + L  A+  L  E+ PPD
Sbjct: 600 TKVPVIIVCGRKEAEERTVNIRRLGSQDQVSMGLDAAVESLALEATPPD 648


>gi|222148633|ref|YP_002549590.1| threonyl-tRNA synthetase [Agrobacterium vitis S4]
 gi|254783504|sp|B9JWF4|SYT_AGRVS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|221735619|gb|ACM36582.1| threonyl-tRNA synthetase [Agrobacterium vitis S4]
          Length = 666

 Score =  919 bits (2374), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 414/658 (62%), Positives = 525/658 (79%), Gaps = 6/658 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIE 60
           M   + LTFPDGS+++F   ATG DVAESIS+SLAKKAVA+A++G V DL+DPV +G IE
Sbjct: 1   MSDTVSLTFPDGSVRSFAAGATGRDVAESISKSLAKKAVAIALDGVVRDLADPVVDGKIE 60

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           I+T  DPR+L +IRH  AH++AEAVQ +WP  QV IGP+IE+GFYYDF K +PF+ ++L 
Sbjct: 61  IVTRADPRALELIRHDTAHVLAEAVQEMWPGTQVTIGPVIENGFYYDFAKNEPFTPEDLP 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IEKKM+EII R+ PF K+  S EKARE+F +K E+YKVE++++IP  +++ +Y QG+WF
Sbjct: 121 KIEKKMKEIIQRNQPFRKEVWSREKAREVFAAKGESYKVELIDAIPEDQDIKIYYQGDWF 180

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           D CRGPH+ STGQ+   FKLMKVAGAYWRGDSN PML+RIYGTA+  Q++L  YL+ L E
Sbjct: 181 DPCRGPHMASTGQIGTAFKLMKVAGAYWRGDSNNPMLTRIYGTAFAEQEQLDNYLHILAE 240

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVL 300
           +EKRDHRKL REMDLFH  E+G GV+FWH KGWK+FQ+L +YMRR++ + Y+E+N PQVL
Sbjct: 241 AEKRDHRKLGREMDLFHFQEEGPGVVFWHGKGWKMFQSLTAYMRRRLANTYQEVNAPQVL 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKCA------DDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
           D+ LW+ SGHW  Y+ NMFAVK A      +D   D R FALKPMNCPGHV +F HGLKS
Sbjct: 301 DKSLWETSGHWGWYQENMFAVKSAHAFTNPNDPEADQRVFALKPMNCPGHVQIFKHGLKS 360

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YRELPVRLAEFG V+R E SG+LHGLMRVRGFTQDDAHVFCT+EQM  ECL+I++LI+S+
Sbjct: 361 YRELPVRLAEFGLVHRYEASGALHGLMRVRGFTQDDAHVFCTEEQMAAECLRINDLILSV 420

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           Y+DFGF++++VKLSTRPEKRVGSD LWD AE++M  VL  I+  S  RI TG+L GEGAF
Sbjct: 421 YEDFGFKEVVVKLSTRPEKRVGSDELWDRAESVMTEVLKAIEEQSGGRIKTGILPGEGAF 480

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPKFEY LKDAIGR+WQCGT QVDFNLP RF AFY++ HSEK  PVMIHRA+ GS+ERF
Sbjct: 481 YGPKFEYTLKDAIGREWQCGTTQVDFNLPERFGAFYIDQHSEKTQPVMIHRAICGSMERF 540

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
           +GI+IENF G++PLW +P+Q +V TITS A +Y +++A  L+   L +ETDFRNE INYK
Sbjct: 541 LGILIENFAGHMPLWFAPLQVVVATITSEADDYGRDVAEQLRDAGLEVETDFRNEKINYK 600

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           +REHS+ K+P+I++CG +EA ER++ IRR GS     ++L +AI  L  E+ PPD ++
Sbjct: 601 VREHSVGKVPVIMVCGKREAEERTVNIRRLGSQDQVSMTLDEAIASLVDEATPPDVKR 658


>gi|163760291|ref|ZP_02167374.1| threonyl-tRNA synthetase [Hoeflea phototrophica DFL-43]
 gi|162282690|gb|EDQ32978.1| threonyl-tRNA synthetase [Hoeflea phototrophica DFL-43]
          Length = 668

 Score =  914 bits (2362), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 409/656 (62%), Positives = 522/656 (79%), Gaps = 6/656 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIE 60
           M S I LTFPDGS + +P   TG +VAESIS+SLAKKAVA+A++G++ DLSDPVR+G++E
Sbjct: 1   MASAISLTFPDGSKREYPAGTTGREVAESISKSLAKKAVAIALDGELTDLSDPVRDGALE 60

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           I+T  DPR+L +IRH  AH+MAEAVQ ++P  QV IGP+IE+GFYYDF K +PF+ ++L 
Sbjct: 61  IVTRTDPRALELIRHDAAHVMAEAVQELFPGTQVTIGPVIENGFYYDFAKNEPFTPEDLP 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEKKM+EIIAR+ PF K+  S ++AR +F  K EAYKVE++ESI + E++ +YRQG+WF
Sbjct: 121 VIEKKMKEIIARNKPFTKEVWSRDEARRVFAEKGEAYKVELIESINSDEDLKIYRQGDWF 180

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           D+CRGPH+ STGQ+   FKLMKVAGAYWRGDSN  ML+RIYGTAW  Q EL  YL+ LEE
Sbjct: 181 DMCRGPHMASTGQIGTAFKLMKVAGAYWRGDSNNTMLTRIYGTAWADQAELDAYLHMLEE 240

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVL 300
           +EKRDHR+L REMDLFH  E+G GV+FWH KGWK+FQ L++YMRR++++DYEE+N PQ+L
Sbjct: 241 AEKRDHRRLGREMDLFHFQEEGPGVVFWHSKGWKMFQNLLAYMRRRLENDYEEVNAPQIL 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKCA------DDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
           D+ LW+ SGHW  Y+ NMFAVK A      DD   D R FALKPMNCPGHV +F HGLKS
Sbjct: 301 DKSLWETSGHWGWYQENMFAVKSAHAFTNPDDEEADNRIFALKPMNCPGHVQIFKHGLKS 360

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YR+LPVRLAEFG+V+R EPSG+LHGLMRVR FTQDDAHVFCT+EQ+  ECLKI++L++S+
Sbjct: 361 YRDLPVRLAEFGNVHRYEPSGALHGLMRVRAFTQDDAHVFCTEEQLEAECLKINDLMMSV 420

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           Y DFGFE+++VKL+TRPEKRVG+DA+WD AE+I++ VLD +   S  RI  G+  GEG F
Sbjct: 421 YSDFGFEEVVVKLATRPEKRVGTDAMWDHAEDILRKVLDKMAAESGGRIKVGINEGEGTF 480

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPKFEY L+DAIGRDWQCGT QVDFNLP RF AFY+ + SEK  PVM+HRA+ GS+ERF
Sbjct: 481 YGPKFEYTLRDAIGRDWQCGTTQVDFNLPERFGAFYIGADSEKKQPVMVHRAICGSLERF 540

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
           +GI+IE+  G++PLW +P+Q +V TITS A +Y   +A  L+   L +ETDFRNE INYK
Sbjct: 541 LGILIESHAGHMPLWFAPLQVVVATITSEADDYGAAVAQRLRDAGLQVETDFRNEKINYK 600

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDC 650
           +REHS+ K+P+I++CG +EA E+++ +RR GS     +SL DAI  L +E+ PPD 
Sbjct: 601 VREHSVAKVPVILVCGMREAEEQTVNVRRLGSRDQVSMSLADAIAKLAEEATPPDV 656


>gi|114706249|ref|ZP_01439151.1| threonyl-tRNA synthetase [Fulvimarina pelagi HTCC2506]
 gi|114538110|gb|EAU41232.1| threonyl-tRNA synthetase [Fulvimarina pelagi HTCC2506]
          Length = 670

 Score =  906 bits (2342), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 407/659 (61%), Positives = 520/659 (78%), Gaps = 7/659 (1%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M   + LTFPDGSIKN+    +G+++A  IS+SL KKAVA A++G+V DL+DPV R G++
Sbjct: 1   MAEAVSLTFPDGSIKNYAPQTSGAEIASGISKSLGKKAVAYALDGEVRDLADPVGRAGAL 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EI+T +DPR+L +IRH CAH++AEAVQ +WP  QV IGP+IE+GFYYDF +E PF+ ++L
Sbjct: 61  EILTRDDPRALELIRHDCAHVLAEAVQELWPGTQVTIGPVIENGFYYDFHRETPFTPEDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM EII R+ PF K+  S  +ARE+FE+K E +KVE++++IP  +++ +Y+QGEW
Sbjct: 121 PVIEKKMSEIIQRNRPFTKEVWSRNEAREVFETKGENFKVELVDAIPEDQDLKIYKQGEW 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPH+ STGQ+   FKLMK AGAYWRGDS RPMLSRIYGTAW ++ +L  YL+ LE
Sbjct: 181 FDLCRGPHMASTGQIGDAFKLMKTAGAYWRGDSTRPMLSRIYGTAWASKDQLKNYLHMLE 240

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQV 299
           E+EKRDHRKL REMDLFH  E+G GV+FWH KGW++FQ+L+SYMRR++   YEE+N PQ+
Sbjct: 241 EAEKRDHRKLGREMDLFHFQEEGPGVVFWHSKGWRMFQSLVSYMRRRLDGTYEEVNAPQI 300

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCA------DDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           LD+ LW+ SGHW  Y+ NMFAVK A      DD   D R FA+KPMNCPGHV +F HGLK
Sbjct: 301 LDKALWETSGHWGWYQENMFAVKSAHAFTRPDDAEADHRVFAIKPMNCPGHVQIFKHGLK 360

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYRELP+R AEFG+V+R EPSG+LHGLMRVRGFTQDDAHVFCT+EQ+  ECL+I++LI+S
Sbjct: 361 SYRELPIRYAEFGNVHRYEPSGALHGLMRVRGFTQDDAHVFCTEEQLAAECLRINDLILS 420

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           IY DFGFE+I+VKLSTRPEKRVGSD  WD AE IM  VL  I+  S  +I T +L GEGA
Sbjct: 421 IYADFGFEEIVVKLSTRPEKRVGSDENWDHAEAIMGDVLKEIEAKSGGKIRTSILEGEGA 480

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPKFEY L+DAIGR+WQCGT QVDFNLP RF AFY++ +SEK  PVMIHRA+ GS+ER
Sbjct: 481 FYGPKFEYTLRDAIGREWQCGTTQVDFNLPERFGAFYIDENSEKKRPVMIHRAICGSMER 540

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           F+GI++EN+ G++PLW  P QA+V TITS A +YA+E+  +L+   L +ETD RNE INY
Sbjct: 541 FLGILLENYAGHMPLWFVPQQAVVATITSEADDYAREVTEVLRDAGLKVETDLRNEKINY 600

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           K+REHS+ K+P+II+CG +EA ER++ IRR GS     + L +A+  L  E++PPD ++
Sbjct: 601 KVREHSLAKVPVIIVCGRREAEERAVNIRRLGSKDQTAMGLEEAVQTLAAEAMPPDVKR 659


>gi|110633361|ref|YP_673569.1| threonyl-tRNA synthetase [Mesorhizobium sp. BNC1]
 gi|123058100|sp|Q11JM1|SYT_MESSB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|110284345|gb|ABG62404.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Chelativorans
           sp. BNC1]
          Length = 656

 Score =  904 bits (2336), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 408/653 (62%), Positives = 513/653 (78%), Gaps = 1/653 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M     LTFPDGS++N     TG+D+AESIS+SLAKKAVA A++G + DLSDPV R G I
Sbjct: 1   MAEAASLTFPDGSVRNVDAAMTGADIAESISKSLAKKAVAYAMDGSLRDLSDPVERSGKI 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT EDPR+L +IRH  AH++AEAVQ +WP  QV IGP+IE+GFYYDF + +PF+ D+L
Sbjct: 61  EIITREDPRALELIRHDAAHVLAEAVQELWPGTQVTIGPVIENGFYYDFARNEPFTLDDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM+EI+ R+  F K+    +KA+++F  K E+YKVE++++IP  +++ +Y QG+W
Sbjct: 121 PVIEKKMREIVDRNKRFSKEVWPRDKAKKVFADKGESYKVELIDAIPEDQDLKIYFQGDW 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPH+ STGQ+ K FKLMKVAGAYWRGDSNRPML+RIYGTAW  QQ+L  YL  LE
Sbjct: 181 FDLCRGPHMASTGQIGKAFKLMKVAGAYWRGDSNRPMLTRIYGTAWADQQQLDSYLQMLE 240

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQV 299
           E+EKRDHR+L REMDLFH  E+G GV+FWH KGW++FQ L+SYMRR++   Y+E+N PQV
Sbjct: 241 EAEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWRMFQNLVSYMRRRLDGVYQEVNAPQV 300

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           LD  LWQ SGHW  Y+ NMF V+CAD+  +D RTFALKPMNCPGHV +F HGLKSYR+LP
Sbjct: 301 LDHSLWQTSGHWGWYKENMFKVECADEEAEDKRTFALKPMNCPGHVQIFKHGLKSYRDLP 360

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +RLAEFG+V+R EPSG+LHGLMRVRGFTQDDAH+FCT++Q+  ECLKI++LI+S Y DFG
Sbjct: 361 IRLAEFGAVHRYEPSGALHGLMRVRGFTQDDAHIFCTEDQLAEECLKINDLILSTYADFG 420

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           FE+I V  STRPEKRVGSDALWD AE IM GVL+ I   S  RI T +  G+GAFYGPKF
Sbjct: 421 FEEIQVFFSTRPEKRVGSDALWDHAEEIMGGVLEQIAERSGGRIKTAINPGDGAFYGPKF 480

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +Y+LKDAIGR WQCGT QVDFNLP RF AFY++  SEK  PVMIHRA+ GS+ERF+GI+I
Sbjct: 481 DYVLKDAIGRQWQCGTTQVDFNLPERFGAFYIDKDSEKKQPVMIHRAICGSMERFLGILI 540

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           EN+ G+ PLW +P+Q +V TITS A +YA+++   LK+  L+ E D RNE INYK+REHS
Sbjct: 541 ENYAGHFPLWFAPLQVVVATITSDADDYARQVTQQLKAAGLTAEADLRNEKINYKVREHS 600

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           + K+P+I++CG +EA E S+ IRR GS     + L +AI  L  E+ PPD ++
Sbjct: 601 LAKVPVILVCGKREAEEGSVNIRRLGSRDQASLLLAEAIAQLIDEATPPDIRR 653


>gi|154245583|ref|YP_001416541.1| threonyl-tRNA synthetase [Xanthobacter autotrophicus Py2]
 gi|154159668|gb|ABS66884.1| threonyl-tRNA synthetase [Xanthobacter autotrophicus Py2]
          Length = 660

 Score =  897 bits (2319), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 398/649 (61%), Positives = 516/649 (79%), Gaps = 1/649 (0%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I LTFPDG+ +++    +G+D+A +IS+SLAKKAVAV ++G + DLS+P+ R+  +EI+T
Sbjct: 2   ISLTFPDGAKRDYAEGTSGADIAAAISKSLAKKAVAVTLDGALTDLSEPITRDAKLEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +DPR+L +IRH C+H+MAEAVQ +WP  QV IGP+IE+GFYYDF +  PF++++L  IE
Sbjct: 62  RDDPRALELIRHDCSHVMAEAVQELWPGTQVTIGPVIENGFYYDFARNAPFTTEDLPVIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            KM+EIIARD PF K+  + ++A+ +F +K E YKVE++++IP+ ++V +Y+QGEWFDLC
Sbjct: 122 NKMREIIARDRPFTKEVWTRDEAKRVFAAKGEGYKVELVDAIPSDQDVKIYKQGEWFDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG++   FKLMKVAGAYWRGDSN PML+RIYGTAW  ++EL  Y++ LEE+EK
Sbjct: 182 RGPHMPSTGKIGTAFKLMKVAGAYWRGDSNNPMLTRIYGTAWQDEKELNAYIHRLEEAEK 241

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQH 303
           RDHR+L REMDLFH  E+G G +FWH KGW +FQ L++YMRR++K DY E+N PQVLD  
Sbjct: 242 RDHRRLGREMDLFHFQEEGPGTVFWHPKGWTLFQELVAYMRRRLKADYNEVNAPQVLDAG 301

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+ SGHW  Y+ NMF V+ A D  KD R FALKPMNCPGHV +F HGLKSYR+LP+RLA
Sbjct: 302 LWETSGHWGWYKENMFKVQSAGDETKDERVFALKPMNCPGHVQIFKHGLKSYRDLPLRLA 361

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFG+V+R EPSG+LHGLMRVRGFTQDDAHVFCT+EQM  ECLKI++LI+S Y DFGF++I
Sbjct: 362 EFGAVHRYEPSGALHGLMRVRGFTQDDAHVFCTEEQMAAECLKINDLILSTYADFGFDEI 421

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKRVGSDA+WD AE +M  VL  I+ +S  RI TG+L GEGAFYGPKFEY L
Sbjct: 422 VVKLSTRPEKRVGSDAVWDHAEEVMTRVLAEIEAASGGRIKTGILPGEGAFYGPKFEYTL 481

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           KDAIGR+WQCGT QVDFNLP RF AFYV++  +K  PVMIHRA+ GS+ERF GI+IE+F 
Sbjct: 482 KDAIGREWQCGTTQVDFNLPERFGAFYVDADGQKKTPVMIHRAICGSMERFTGILIEHFA 541

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G+ PLWL+P Q +V TITS A +YA E+A LLK+  L +E D RNE IN K+REHS+ K+
Sbjct: 542 GHFPLWLAPTQVVVATITSDADDYAAEVAELLKAEGLRVELDVRNEKINLKVREHSLAKV 601

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           P++++ G KEA+ER++ IRR GS      +L + +  L  E++PPD ++
Sbjct: 602 PVLLVAGKKEAAERTLSIRRLGSNAQTGGTLDEVVAALVDEAVPPDLKR 650


>gi|121601812|ref|YP_988945.1| threonyl-tRNA synthetase [Bartonella bacilliformis KC583]
 gi|166223323|sp|A1USJ2|SYT_BARBK RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|120613989|gb|ABM44590.1| threonyl-tRNA synthetase [Bartonella bacilliformis KC583]
          Length = 658

 Score =  885 bits (2286), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 404/654 (61%), Positives = 516/654 (78%), Gaps = 2/654 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSI 59
           M   I L+FPDGS ++FP   TG ++AESIS+SLAKKA+A ++NG + DL DP+ + G +
Sbjct: 1   MSFSISLSFPDGSQRDFPAEITGLELAESISKSLAKKAIAYSLNGVIRDLLDPLEQSGQV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT +DPR+L +IRHSCAH++AEAVQ ++PE QV IGP+IE+GFYYDF ++QPF+ ++L
Sbjct: 61  EIITRDDPRALQLIRHSCAHVLAEAVQELFPETQVTIGPVIENGFYYDFARQQPFTLEDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM+EII R+  F K+  S EKA+++F  K E YKVE++++IP  +++ +Y QG+W
Sbjct: 121 NTIEKKMREIIQRNKFFKKEIWSREKAKKIFSDKGELYKVELIDAIPEDQDLKIYYQGDW 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPHV STGQ+   FKLMKVAGAYWRGD+N PML+RIYGTA++ +  L  YL  LE
Sbjct: 181 FDLCRGPHVPSTGQIGNAFKLMKVAGAYWRGDANNPMLTRIYGTAFSNENALKAYLNMLE 240

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+EKRDHR+L REMDLFH  E+G G+IFWH KGWK+FQ L+SYMRR++ +  Y+E+N PQ
Sbjct: 241 EAEKRDHRRLGREMDLFHFQEEGPGMIFWHPKGWKMFQNLVSYMRRRLDEHKYDEVNAPQ 300

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           VLD+ LW+ SGHW  Y+ NMF    A +   D   +ALKPMNCPGHV +F HGLKSYR+L
Sbjct: 301 VLDKSLWETSGHWGWYQENMFKTIPATNDWNDEHVYALKPMNCPGHVQIFKHGLKSYRDL 360

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFG ++R EPSGSLHGLMRVR FTQDDAHVFCT EQ+ +ECLKI++LI+S Y DF
Sbjct: 361 PIRLAEFGLLHRYEPSGSLHGLMRVRSFTQDDAHVFCTDEQLADECLKINDLILSTYADF 420

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE+I++KLSTRPEKRVGSD LWD AENIM  VL TI+  ++ RI T +L GEGAFYGPK
Sbjct: 421 GFEEIILKLSTRPEKRVGSDELWDHAENIMMSVLKTIEKEAKGRIKTSILQGEGAFYGPK 480

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           FEY LKDAIGR+WQCGT QVDFNLP RF  FY+N  SEKC PVMIHRA+FGS+ERF+GI+
Sbjct: 481 FEYTLKDAIGREWQCGTTQVDFNLPERFEVFYINRDSEKCQPVMIHRAIFGSMERFLGIL 540

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IENF G++PLWL+P Q +VTTITS A EYA++I   LK+  LS  +D R+E INYKIREH
Sbjct: 541 IENFAGHMPLWLAPQQIVVTTITSEANEYAEKITAKLKASGLSAVSDLRSEKINYKIREH 600

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           S++K+P+I++CG +E+   S+ +RR GS     + +  AI  LT E++PPD ++
Sbjct: 601 SLQKVPVILVCGKRESETNSVNMRRLGSMNQISLPIDQAIKQLTNEAIPPDLRR 654


>gi|260463880|ref|ZP_05812076.1| threonyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075]
 gi|259030255|gb|EEW31535.1| threonyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075]
          Length = 658

 Score =  884 bits (2285), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 399/654 (61%), Positives = 511/654 (78%), Gaps = 2/654 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M + + LTFPDGS++++    TG+ +AESIS+SLAKKAVA AI+G V DLSDP+ + G +
Sbjct: 1   MLNSVSLTFPDGSVRDYDAAMTGAGLAESISKSLAKKAVAYAIDGTVRDLSDPLGKSGKV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT +D R+L +IRH  AH++AEAVQ +WP  QV IGP+IE+GFYYDF + +PF+ D+ 
Sbjct: 61  EIITRDDARALELIRHDTAHVLAEAVQELWPGTQVTIGPVIENGFYYDFARNEPFTPDDF 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM+EIIAR+ PF K+  S E+A+++F  K E YK+E++++IP  +++ +Y QG+W
Sbjct: 121 PVIEKKMREIIARNKPFTKEVWSREQAKKVFADKGERYKLELIDAIPEDQDLKIYAQGDW 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPH+ STGQ+   FKLMKVAGAYWRGDSN PML+RIYGTAW  Q +L  Y   LE
Sbjct: 181 FDLCRGPHMASTGQIGNAFKLMKVAGAYWRGDSNNPMLTRIYGTAWADQAQLDAYQTMLE 240

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQ 298
           E+EKRDHRKL REMDLFH  E+G GV+FWH KGWK+FQ L++YMRR++ +  Y+E+N PQ
Sbjct: 241 EAEKRDHRKLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVNYMRRRLDEQGYQEVNAPQ 300

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           VLD+ LW+ SGHW  YR  MF V  A D   D R FALKPMNCPGHV +F HGLKSYR+L
Sbjct: 301 VLDKSLWETSGHWGWYRDAMFKVTVAGDDTDDDRVFALKPMNCPGHVQIFKHGLKSYRDL 360

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           PV+LAEFG+V+R EPSG+LHGLMRVRGFTQDDAH+FCT+EQ+  ECL+I++LI+S Y DF
Sbjct: 361 PVKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQLAAECLRINDLILSTYADF 420

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE++ VKLSTRP+KRVG+D  WD AE IM  VL+TI+  S +RI T +  GEGAFYGPK
Sbjct: 421 GFEEVSVKLSTRPDKRVGTDEAWDHAEAIMGNVLETIRTRSGNRIKTSINPGEGAFYGPK 480

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           FEY+LKDAIGR+WQCGT QVDFNLP RF AFY+ S SEK  PVM+HRA+ GS+ERF+GI+
Sbjct: 481 FEYVLKDAIGREWQCGTTQVDFNLPERFGAFYIGSDSEKKQPVMVHRAICGSMERFLGIL 540

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IEN+ G+ PLW +P+Q +V TITS A  YA E+   LK+  L  E D RNE INYK+REH
Sbjct: 541 IENYSGHFPLWFAPLQVVVATITSEADGYATEVVAKLKAAGLLAEADLRNEKINYKVREH 600

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           S+ K+P+I++CG +EA E+++ IRR GS   Q + L +AI  LT+E++ PD ++
Sbjct: 601 SLAKVPVILVCGKREAEEQTVNIRRLGSRDQQSLGLAEAIAQLTEEAITPDRRR 654


>gi|163868456|ref|YP_001609665.1| threonyl-tRNA synthetase [Bartonella tribocorum CIP 105476]
 gi|189083598|sp|A9IVB0|SYT_BART1 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|161018112|emb|CAK01670.1| Threonyl-tRNA synthetase [Bartonella tribocorum CIP 105476]
          Length = 658

 Score =  884 bits (2285), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 409/654 (62%), Positives = 512/654 (78%), Gaps = 2/654 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M   I L+FPDGS +N+P   TG ++AESIS+SLAKKAVA +++G   DLSD + + G +
Sbjct: 1   MSCSISLSFPDGSKRNYPAEMTGLELAESISKSLAKKAVAYSLDGITRDLSDSLGQSGQV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT ED R+L +IRH CAH++AEAVQ ++PE QV IGP+IE+GFYYDF ++QPF+ D+L
Sbjct: 61  EIITREDSRALELIRHDCAHVLAEAVQELFPETQVTIGPVIENGFYYDFARQQPFTLDDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM+EII R+ PF K+  S EKAR +F  KKE YKVE++ SIP  +++ +Y QGEW
Sbjct: 121 TIIEKKMREIIQRNKPFRKEIWSREKARRVFSEKKEFYKVELINSIPDNQDLKIYYQGEW 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPH++STGQ+   FKLMKVAGAYWRGD+N PML+RIYGTA+  + +L  YL+ LE
Sbjct: 181 FDLCRGPHMQSTGQIGNAFKLMKVAGAYWRGDANNPMLTRIYGTAFANENDLKAYLHMLE 240

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+EKRDHR+L REMDLFH  E+G G+IFWH+KGWK+FQ LI+YMRR++ D  Y E+N PQ
Sbjct: 241 EAEKRDHRRLGREMDLFHFQEEGPGMIFWHQKGWKMFQNLINYMRRRLDDHQYAEVNAPQ 300

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           VLD+ LW+ SGHW  Y+ NMF    A + +     +ALKPMNCPGHV +F HGLKSYR+L
Sbjct: 301 VLDRSLWEISGHWGWYKENMFKAIPAAEDLDHEHIYALKPMNCPGHVQIFKHGLKSYRDL 360

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFG V+R EPSGSLHGLMRVR FTQDDAH+FCT EQ+  ECL I++LI+S Y DF
Sbjct: 361 PIRLAEFGLVHRYEPSGSLHGLMRVRSFTQDDAHIFCTDEQLAAECLSINDLILSTYADF 420

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF++I +KLSTRPEKRVGSDALWD AE+IM+ VL TI+     +I T +L GEGAFYGPK
Sbjct: 421 GFKEISLKLSTRPEKRVGSDALWDHAESIMESVLKTIETKFAGQIKTSILPGEGAFYGPK 480

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           FEY LKDAIGR+WQCGT Q+DFNLP RF AFY++  SEK  PVMIHRA+FGS+ERF+GI+
Sbjct: 481 FEYTLKDAIGREWQCGTTQLDFNLPERFGAFYIDKDSEKRQPVMIHRAIFGSMERFLGIL 540

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IENF G++PLWL+P Q +V TITS A EYAQ+I   LK+  LS  TD RNE INYKIREH
Sbjct: 541 IENFAGHMPLWLAPEQIVVATITSEANEYAQKITARLKAVGLSATTDLRNEKINYKIREH 600

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           S++K+P+I++CG +EA   S+ +RR GS     +S+ DAI  L+ ES PPD Q+
Sbjct: 601 SLQKVPVILVCGKREAETNSVNMRRLGSPNQTLLSVEDAIKQLSNESTPPDLQR 654


>gi|240850680|ref|YP_002972080.1| threonyl-tRNA synthetase [Bartonella grahamii as4aup]
 gi|240267803|gb|ACS51391.1| threonyl-tRNA synthetase [Bartonella grahamii as4aup]
          Length = 658

 Score =  884 bits (2285), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 406/654 (62%), Positives = 514/654 (78%), Gaps = 2/654 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSI 59
           M   + L+FPDGS +N+P   TG ++AESIS+SLAKKAVA +++G   DLSDP+ + G +
Sbjct: 1   MSCSVSLSFPDGSKRNYPPEMTGLELAESISKSLAKKAVAYSLDGITRDLSDPLEQSGQV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT ED R+L +IRH CAH++AEAVQ ++PE QV IGP+IE+GFYYDF ++QPF+ D+L
Sbjct: 61  EIITREDSRALELIRHDCAHVLAEAVQELFPETQVTIGPVIENGFYYDFARQQPFTLDDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM+EII R+ PF K+  S EKAR+ F  KKE YKVE+++SIP  +++ +Y QG+W
Sbjct: 121 TIIEKKMREIIQRNKPFRKEIWSREKARKKFSEKKEFYKVELIDSIPEDQDLKIYYQGDW 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPH++STGQ+   FKLMKVAGAYWRGD+N PML+RIYGTA+  + +L  YL+ LE
Sbjct: 181 FDLCRGPHMQSTGQIGNAFKLMKVAGAYWRGDANNPMLTRIYGTAFANENDLKAYLHMLE 240

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+EKRDHR+L REMDLFH  E+G G+IFWH+KGWK+FQ LI+YMRR++ D  Y E+N PQ
Sbjct: 241 EAEKRDHRRLGREMDLFHFQEEGPGMIFWHKKGWKMFQNLINYMRRRLDDHQYAEVNAPQ 300

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           VLD+ LW+ SGHW  Y+ NMF V    +       +ALKPMNCPGHV +F HGLKSYR+L
Sbjct: 301 VLDRSLWEISGHWGWYKENMFKVIPVAENSDHGNVYALKPMNCPGHVQIFKHGLKSYRDL 360

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFG V+R EPSGSLHGLMRVRGFTQDDAH+FCT EQ+ +ECL I++LI+S Y DF
Sbjct: 361 PIRLAEFGLVHRYEPSGSLHGLMRVRGFTQDDAHIFCTDEQLADECLSINDLILSTYADF 420

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF++I +KLSTRPEKRVGSDALWD AE+IM+ VL TI+     +I T +L GEGAFYGPK
Sbjct: 421 GFKEISLKLSTRPEKRVGSDALWDHAESIMESVLKTIETKFAGQIKTSILPGEGAFYGPK 480

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           FEY LKDAIGR+WQCGT Q+DFNLP RF AFY++  SEK  PVMIHRA+FGS+ERF+GI+
Sbjct: 481 FEYTLKDAIGREWQCGTTQIDFNLPERFGAFYIDKDSEKRQPVMIHRAIFGSMERFLGIL 540

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IENF G++PLWL+P Q +V TITS A EYAQ+I   L++  LS   D RNE INYKIREH
Sbjct: 541 IENFAGHMPLWLAPEQVVVATITSEANEYAQKITAKLRAIGLSATIDLRNEKINYKIREH 600

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           S++K+P+I++CG +EA   S+ +RR GST    +S+ D I  L+ E+ PPD Q+
Sbjct: 601 SLQKVPVILVCGKREAETNSVNMRRLGSTNKTLLSVEDVIKQLSNEATPPDLQR 654


>gi|254503680|ref|ZP_05115831.1| threonyl-tRNA synthetase [Labrenzia alexandrii DFL-11]
 gi|222439751|gb|EEE46430.1| threonyl-tRNA synthetase [Labrenzia alexandrii DFL-11]
          Length = 703

 Score =  884 bits (2284), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 402/655 (61%), Positives = 515/655 (78%), Gaps = 8/655 (1%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I+LTFPD S++ +    +G DVA  IS+SLAKKAVA+ ++G++ DLSDP+  + +IEI+T
Sbjct: 49  IELTFPDNSVRAYEAGTSGLDVATGISKSLAKKAVAMTLDGELKDLSDPIDTDANIEIVT 108

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQP-------FSS 116
            +DPR+L +IRH  AH+MAEAVQ IWP  QV IGP+IE+GFYYDF +  P       F+ 
Sbjct: 109 RDDPRALELIRHDAAHVMAEAVQEIWPGTQVTIGPVIENGFYYDFKRVHPDTKDNWPFTQ 168

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
           D+L  IEKKM+EIIAR + F K+  + ++A+  F +K E YKVE++++IP  +++ +Y+Q
Sbjct: 169 DDLPVIEKKMREIIARGAQFTKEVWTRDEAKTYFAAKGEDYKVELIDAIPEDQDLKIYKQ 228

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           G+W DLCRGPH+ ST Q+   FKLMKVAGAYWRGDSN  ML+RIY TAW+ ++EL  YL+
Sbjct: 229 GQWLDLCRGPHMVSTKQIGDAFKLMKVAGAYWRGDSNNEMLTRIYATAWHNEKELKGYLH 288

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINT 296
            LEE+EKRDHRKL REM+LFH  E+G GV+FWH KGW IFQ LI+Y RR++KDDY+E+N 
Sbjct: 289 MLEEAEKRDHRKLGREMNLFHFQEEGPGVVFWHPKGWDIFQNLIAYKRRRLKDDYKEVNA 348

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           PQVL   LW+ SGHW  Y+ NMF+V+CAD   +D R FALKPMNCPGHV +F HGLKSYR
Sbjct: 349 PQVLHTSLWETSGHWAWYKDNMFSVQCADPESEDDRIFALKPMNCPGHVEIFKHGLKSYR 408

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +LP+R+AEFG V+R EPSG++HGLMRVRGFTQDDAHVFCT+EQM  ECLKI++LI+S+Y+
Sbjct: 409 DLPLRMAEFGVVHRYEPSGAMHGLMRVRGFTQDDAHVFCTEEQMAEECLKINDLILSVYE 468

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           DFGFE+I+VKLSTRPEKRVGSD +WD AE +M  VL TI+  S+ RI T +L GEGAFYG
Sbjct: 469 DFGFEEIVVKLSTRPEKRVGSDEVWDHAEAVMTSVLKTIEEQSEGRIKTDILPGEGAFYG 528

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PKFEY LKDAIGRDWQCGT QVDFNLP RF AFYV+++ EK  PVMIHRA+ GS+ERF+G
Sbjct: 529 PKFEYTLKDAIGRDWQCGTTQVDFNLPERFGAFYVDNNGEKKVPVMIHRAICGSMERFLG 588

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           I+IEN+ G+ PLW +P+Q +V TITS A  Y QE+A+LLKS  L +ETDFRNE INYK+R
Sbjct: 589 ILIENYAGHFPLWFAPLQIVVATITSEADSYGQEVADLLKSKGLKVETDFRNEKINYKVR 648

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           EHS+ K+P+I++CG +EA ER++ IRR GS     + L +A+    +E+ PPD +
Sbjct: 649 EHSLAKVPVILVCGMREAEERTVNIRRLGSKNQTPMGLDEAVAAFVEEATPPDLK 703


>gi|17987198|ref|NP_539832.1| threonyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|256044731|ref|ZP_05447635.1| threonyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|260564073|ref|ZP_05834559.1| threonyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|265991152|ref|ZP_06103709.1| threonyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|22654120|sp|Q8YH89|SYT_BRUME RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|17982868|gb|AAL52096.1| threonyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|260154089|gb|EEW89181.1| threonyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|263001936|gb|EEZ14511.1| threonyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
          Length = 658

 Score =  883 bits (2281), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 405/651 (62%), Positives = 519/651 (79%), Gaps = 3/651 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M + + L FPDGS++ +    TG+ +AESIS+SLAKKAVA A++G V DLSDP+   G +
Sbjct: 1   MSNTVSLQFPDGSVREYDASMTGAALAESISKSLAKKAVAYAVDGTVRDLSDPLGASGKV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT EDPR+L +IRH  AH++AEAVQ ++P  QV IGP+IE+GFYYDF + +PF+ D+L
Sbjct: 61  EIITREDPRALELIRHDTAHVLAEAVQELFPGTQVTIGPVIENGFYYDFARNEPFTLDDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM+EII R+ PF K+  S EKA+++F  K E+YKVE++++IPA +++ +Y QG+W
Sbjct: 121 PVIEKKMREIIQRNKPFTKEVWSREKAKQVFSDKGESYKVELVDAIPAGQDLKIYYQGDW 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPH+ STGQ+   FKLMKVAGAYWRGD+N PML+RIYGTA+    +L  YL+ LE
Sbjct: 181 FDLCRGPHMASTGQIGNSFKLMKVAGAYWRGDANNPMLTRIYGTAFANDNDLQAYLHMLE 240

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+EKRDHR+L REMDLFH  E+G GV+FWH KGWK+FQ L+SYMRR++    Y+E+NTPQ
Sbjct: 241 EAEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDSHGYQEVNTPQ 300

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           VLD+ LW+ SGHW  YR NMF V  A D   D R FALKPMNCPGHV +F HGLKSYR+L
Sbjct: 301 VLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIFKHGLKSYRDL 360

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P++LAEFG+V+R EPSG+LHGLMRVRGFTQDDAH+FCT+EQM  ECL+I++LI+S+YKDF
Sbjct: 361 PIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQMAAECLQINDLILSVYKDF 420

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE+I +KLSTRPEKRVGSD LWD AE++M  VL+ I+  S + I TG+L GEGAFYGPK
Sbjct: 421 GFEEITIKLSTRPEKRVGSDELWDRAESVMMTVLEQIRQQSNN-IKTGILPGEGAFYGPK 479

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           FEY LKDAIGR+WQCGT QVDFNLP RF AFY+ + SEK  PVMIHRA+ GS+ERF+GI+
Sbjct: 480 FEYTLKDAIGREWQCGTTQVDFNLPERFGAFYIGADSEKKQPVMIHRAICGSMERFLGIL 539

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IENF G++PLW +P+Q +V TITS A EYA+E A  LK+  L + TD RNE INYK+REH
Sbjct: 540 IENFAGHMPLWFAPVQVVVATITSDADEYAKEAAAKLKAAGLQVVTDLRNEKINYKVREH 599

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPD 649
           S++K+P+I++CG +EA E+++ +RR GS   + ++L +AI  L +E+ PPD
Sbjct: 600 SLQKVPVILVCGKREAEEKTVNMRRLGSRDQESMTLDEAIARLCEEATPPD 650


>gi|13471046|ref|NP_102615.1| threonyl-tRNA synthetase [Mesorhizobium loti MAFF303099]
 gi|22654133|sp|Q98LR2|SYT_RHILO RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|14021790|dbj|BAB48401.1| threonyl-tRNA synthetase [Mesorhizobium loti MAFF303099]
          Length = 658

 Score =  883 bits (2281), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 399/654 (61%), Positives = 511/654 (78%), Gaps = 2/654 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M + + LTFPDGS++++    TG+ +AESIS+SLAKKAVA AING V DLSDP+ + G +
Sbjct: 1   MLNSVSLTFPDGSVRDYDAAMTGAGLAESISKSLAKKAVAYAINGTVRDLSDPLGKSGKV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT +D R+L +IRH  AH++AEAVQ +WP  QV IGP+IE+GFYYDF + +PF+ D+ 
Sbjct: 61  EIITRDDARALELIRHDTAHVLAEAVQELWPGTQVTIGPVIENGFYYDFARNEPFTPDDF 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM+EIIAR+ PF K+  S +KA+++F  K E YK+E++++IP  +++ +Y QG+W
Sbjct: 121 PVIEKKMREIIARNKPFTKEVWSRDKAKKVFADKGERYKLELIDAIPEDQDLKIYAQGDW 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPH+ STGQ+   FKLMKVAGAYWRGDSN PML+RIYGTAW  Q +L  Y   LE
Sbjct: 181 FDLCRGPHMASTGQIGNAFKLMKVAGAYWRGDSNNPMLTRIYGTAWADQAQLEAYQTMLE 240

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQ 298
           E+EKRDHRKL REMDLFH  E+G GV+FWH KGWK+FQ L++YMRR++ +  Y+E+N PQ
Sbjct: 241 EAEKRDHRKLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVNYMRRRLDEQGYQEVNAPQ 300

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           VLD+ LW+ SGHW  YR  MF V  A D   D R FALKPMNCPGHV +F HGLKSYR+L
Sbjct: 301 VLDKSLWETSGHWGWYRDAMFKVTVAGDDTDDDRVFALKPMNCPGHVQIFKHGLKSYRDL 360

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           PV+LAEFG+V+R EPSG+LHGLMRVRGFTQDDAH+FCT+EQ+ +ECL+I++LI+S Y DF
Sbjct: 361 PVKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQLASECLRINDLILSTYADF 420

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF++I VKLSTRP+KRVG+D  WD AE IM  VL+TI+  S +RI T +  GEGAFYGPK
Sbjct: 421 GFDEISVKLSTRPDKRVGTDEAWDHAEAIMGSVLETIRTRSGNRIKTSINPGEGAFYGPK 480

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           FEY+LKDAIGR+WQCGT QVDFNLP RF AFY+ S SEK  PVM+HRA+ GS+ERF+GI+
Sbjct: 481 FEYVLKDAIGREWQCGTTQVDFNLPERFGAFYIGSDSEKKQPVMVHRAICGSMERFLGIL 540

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IEN+ G+ PLW +P Q +V TITS A  YA E+   LK+  L  E D RNE INYK+REH
Sbjct: 541 IENYSGHFPLWFAPQQVVVATITSEADGYATEVVAKLKAAGLLAEADLRNEKINYKVREH 600

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           S+ K+P+I++CG +EA E+++ IRR GS   + + L +AI  LT+E++ PD ++
Sbjct: 601 SLAKVPVILVCGKREAEEQTVNIRRLGSRDQESLGLAEAIAQLTEEAVTPDRRR 654


>gi|306841798|ref|ZP_07474483.1| threonyl-tRNA synthetase [Brucella sp. BO2]
 gi|306288128|gb|EFM59518.1| threonyl-tRNA synthetase [Brucella sp. BO2]
          Length = 661

 Score =  883 bits (2281), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 404/651 (62%), Positives = 518/651 (79%), Gaps = 3/651 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M + + L FPDGS++ +    TG+ +AESIS+SLAKKAVA A++G V DLSDP+   G +
Sbjct: 4   MSNTVSLQFPDGSVREYDASMTGAALAESISKSLAKKAVAYAVDGTVRDLSDPLGASGKV 63

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT EDPR+L +IRH  AH++AEAVQ ++P  QV IGP+IE+GFYYDF + +PF+ D+L
Sbjct: 64  EIITREDPRALELIRHDTAHVLAEAVQELFPGTQVTIGPVIENGFYYDFARNEPFTLDDL 123

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM+EII R+ PF K+  S EKA+++F  K E+YKVE++++IPA +++ +Y QG+W
Sbjct: 124 PMIEKKMREIIQRNKPFTKEVWSREKAKQVFSDKGESYKVELVDAIPAGQDLKIYYQGDW 183

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPH+ STGQ+   FKLMKVAGAYWRGD+N PML+RIYGTA+    +L  YL+ LE
Sbjct: 184 FDLCRGPHMASTGQIGNSFKLMKVAGAYWRGDANNPMLTRIYGTAFANDNDLQAYLHMLE 243

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+EKRDHR+L REMDLFH  E+G GV+FWH KGWK+FQ L+SYMRR++    Y+E+N PQ
Sbjct: 244 EAEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDSHGYQEVNAPQ 303

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           VLD+ LW+ SGHW  YR NMF V  A D   D R FALKPMNCPGHV +F HGLKSYR+L
Sbjct: 304 VLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIFKHGLKSYRDL 363

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P++LAEFG+V+R EPSG+LHGLMRVRGFTQDDAH+FCT+EQM  ECL+I++LI+S+YKDF
Sbjct: 364 PIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQMAAECLRINDLILSVYKDF 423

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE+I +KLSTRPEKRVGSD LWD AE++M  VL+ I+  S + I TG+L GEGAFYGPK
Sbjct: 424 GFEEITIKLSTRPEKRVGSDELWDRAESVMMTVLEQIRQQSNN-IKTGILPGEGAFYGPK 482

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           FEY LKDAIGR+WQCGT QVDFNLP RF AFY+ + SEK  PVMIHRA+ GS+ERF+GI+
Sbjct: 483 FEYTLKDAIGREWQCGTTQVDFNLPERFGAFYIGADSEKKQPVMIHRAICGSMERFLGIL 542

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IENF G++PLW +P+Q +V TITS A EYA+E A  LK+  L + TD RNE INYK+REH
Sbjct: 543 IENFAGHMPLWFAPVQVVVATITSDADEYAKEAAAKLKAAGLQVVTDLRNEKINYKVREH 602

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPD 649
           S++K+P+I++CG +EA E+++ +RR GS   + ++L +AI  L +E+ PPD
Sbjct: 603 SLQKVPVILVCGKREAEEKTVNMRRLGSRDQESMTLDEAIARLCEEATPPD 653


>gi|319783887|ref|YP_004143363.1| threonyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317169775|gb|ADV13313.1| threonyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 658

 Score =  882 bits (2280), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 396/654 (60%), Positives = 512/654 (78%), Gaps = 2/654 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M + + LTFPDGS++ +    TG+ +AESIS+SLAKKAVA AI+G V DLSDP+ + G +
Sbjct: 1   MLNSVSLTFPDGSVREYDAAMTGAGLAESISKSLAKKAVAYAIDGTVRDLSDPLGKSGKV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EI+T +DPR+L +IRH  AH++AEAVQ +WP  QV IGP+IE+GFYYDF + +PF+ D+ 
Sbjct: 61  EIVTRDDPRALELIRHDAAHVLAEAVQELWPGTQVTIGPVIENGFYYDFARNEPFTPDDF 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM+EII+R+ PF K+  S +KA+++F  K E YK+E++++IP  +++ +Y QG+W
Sbjct: 121 PVIEKKMREIISRNKPFTKEVWSRDKAKKVFADKGERYKLELIDAIPEDQDLKIYAQGDW 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPH+ STGQ+   FKLMKVAGAYWRGDSN PML+RIYGTAW  Q +L  Y   LE
Sbjct: 181 FDLCRGPHMASTGQIGNAFKLMKVAGAYWRGDSNNPMLTRIYGTAWADQAQLEAYQTMLE 240

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQ 298
           E+EKRDHRK+ REMDLFH  E+G GV+FWH KGWK+FQ L++YMRR++ +  Y+E+N PQ
Sbjct: 241 EAEKRDHRKIGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVNYMRRRLDEQGYQEVNAPQ 300

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           VLD+ LW+ SGHW  YR  MF V  A D   D R FALKPMNCPGHV +F HGLKSYR+L
Sbjct: 301 VLDKSLWETSGHWGWYRDAMFKVTVAGDDTDDDRVFALKPMNCPGHVQIFKHGLKSYRDL 360

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           PV+LAEFG+V+R EPSG+LHGLMRVRGFTQDDAH+FCT+EQ+  ECL+I++LI+S Y DF
Sbjct: 361 PVKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQLAAECLRINDLILSTYADF 420

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF++I VKLSTRP+KRVG+D  WD AE IM GVL+TI+  S +RI T +  GEGAFYGPK
Sbjct: 421 GFDEISVKLSTRPDKRVGTDEAWDHAEAIMGGVLETIRTRSGNRIKTSINPGEGAFYGPK 480

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           FEY+LKDAIGR+WQCGT QVDFNLP RF AFY+ S SEK  PVM+HRA+ GS+ERF+GI+
Sbjct: 481 FEYVLKDAIGREWQCGTTQVDFNLPERFGAFYIGSDSEKKQPVMVHRAICGSMERFLGIL 540

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IEN+ G+ PLW +P+Q +V TITS A +YA E+   LK+  L  E D RNE INYK+REH
Sbjct: 541 IENYSGHFPLWFAPLQVVVATITSDADDYATEVVAKLKAAGLLAEADLRNEKINYKVREH 600

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           S+ K+P+I++CG +EA E+++ +RR GS   + + L  AI  LT+E++ PD ++
Sbjct: 601 SLAKVPVILVCGKREAEEQTVNMRRLGSRDQESLGLDQAIAQLTEEAVTPDRRR 654


>gi|294852343|ref|ZP_06793016.1| threonyl-tRNA synthetase [Brucella sp. NVSL 07-0026]
 gi|294820932|gb|EFG37931.1| threonyl-tRNA synthetase [Brucella sp. NVSL 07-0026]
          Length = 683

 Score =  882 bits (2279), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 404/651 (62%), Positives = 519/651 (79%), Gaps = 3/651 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M + + L FPDGS++ +    TG+ +AESIS+SLAKKAVA A++G V DLSDP+   G +
Sbjct: 26  MSNTVSLQFPDGSVREYDASMTGAALAESISKSLAKKAVAYAVDGTVRDLSDPLGASGKV 85

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT EDPR+L +IRH  AH++AEAVQ ++P  QV IGP+IE+GFYYDF + +PF+ D+L
Sbjct: 86  EIITREDPRALELIRHDTAHVLAEAVQELFPGTQVTIGPVIENGFYYDFARNEPFTLDDL 145

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM+EII R+ PF K+  S EKA+++F  K E+YKVE++++IPA +++ +Y QG+W
Sbjct: 146 PVIEKKMREIIQRNKPFTKEVWSREKAKQVFSDKGESYKVELVDAIPAGQDLKIYYQGDW 205

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPH+ STGQ+   FKLMKVAGAYWRGD+N PML+RIYGTA+    +L  YL+ LE
Sbjct: 206 FDLCRGPHMASTGQIGNSFKLMKVAGAYWRGDANNPMLTRIYGTAFANDNDLQAYLHMLE 265

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+EKRDHR+L REMDLFH  E+G+GV+FWH KGWK+FQ L+SYMRR++    Y+E+N PQ
Sbjct: 266 EAEKRDHRRLGREMDLFHFQEEGAGVVFWHAKGWKMFQNLVSYMRRRLDSHGYQEVNAPQ 325

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           VLD+ LW+ SGHW  YR NMF V  A D   D R FALKPMNCPGHV +F HGLKSYR+L
Sbjct: 326 VLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIFKHGLKSYRDL 385

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P++LAEFG+V+R EPSG+LHGLMRVRGFTQDDAH+FCT+EQM  ECL+I++LI+S+YKDF
Sbjct: 386 PIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQMAAECLRINDLILSVYKDF 445

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE+I +KLSTRPEKRVGSD LWD AE++M  VL+ I+  S + I TG+L GEGAFYGPK
Sbjct: 446 GFEEITIKLSTRPEKRVGSDELWDRAESVMMTVLEQIRQQSNN-IKTGILPGEGAFYGPK 504

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           FEY LKDAIGR+WQCGT QVDFNLP RF AFY+ + SEK  PVMIHRA+ GS+ERF+GI+
Sbjct: 505 FEYTLKDAIGREWQCGTTQVDFNLPERFGAFYIGADSEKKQPVMIHRAICGSMERFLGIL 564

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IENF G++PLW +P+Q +V TITS A EYA+E A  LK+  L + TD RNE INYK+REH
Sbjct: 565 IENFAGHMPLWFAPVQVVVATITSDADEYAKEAAAKLKAAGLQVVTDLRNEKINYKVREH 624

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPD 649
           S++K+P+I++CG +EA E+++ +RR GS   + ++L +AI  L +E+ PPD
Sbjct: 625 SLQKVPVILVCGKREAEEKTVNMRRLGSRDQESMTLDEAIARLCEEATPPD 675


>gi|153009484|ref|YP_001370699.1| threonyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188]
 gi|151561372|gb|ABS14870.1| threonyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188]
          Length = 661

 Score =  882 bits (2279), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 404/651 (62%), Positives = 515/651 (79%), Gaps = 3/651 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M + + + FPDGS++ +    TG+ +AESIS+SLAKKAVA A++G V DLSDP+   G I
Sbjct: 4   MSNTVSMQFPDGSVREYDASMTGAGLAESISKSLAKKAVAYAVDGTVRDLSDPLGASGKI 63

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EI+T EDPR+L +IRH  AH++AEAVQ ++P  QV IGP+IE+GFYYDF + +PF+ D+L
Sbjct: 64  EILTREDPRALELIRHDTAHVLAEAVQELFPGTQVTIGPVIENGFYYDFARNEPFTPDDL 123

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM+EII R+ PF K+  S EKA+++F  K E YKVE++E+IPA +++ +Y QG+W
Sbjct: 124 PVIEKKMREIIQRNKPFTKEVWSREKAKQVFADKGENYKVELVEAIPAGQDLKIYYQGDW 183

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPH+ STGQ+   FKLMKVAGAYWRGDSN PML+RIYGTA+    +L  YL+ LE
Sbjct: 184 FDLCRGPHMASTGQIGNSFKLMKVAGAYWRGDSNNPMLTRIYGTAFANDNDLQAYLHMLE 243

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+EKRDHR+L REMDLFH  E+G GV+FWH KGWK+FQ L+SYMRR++    Y+E+N PQ
Sbjct: 244 EAEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDSHGYQEVNAPQ 303

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           VLD+ LW+ SGHW  YR NMF V  A D   D R FALKPMNCPGHV +F HGLKSYR+L
Sbjct: 304 VLDKSLWETSGHWGWYRDNMFKVTVAGDETDDDRVFALKPMNCPGHVMIFKHGLKSYRDL 363

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P++LAEFG+V+R EPSG+LHGLMRVRGFTQDDAH+FCT+EQM  ECL+I++LI+S+YKDF
Sbjct: 364 PIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQMAAECLRINDLILSVYKDF 423

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE+I +KLSTRPEKRVGSD LWD AE++M  VL+ I+  S + I TG+L GEGAFYGPK
Sbjct: 424 GFEEITIKLSTRPEKRVGSDELWDRAESVMMSVLEKIQQQSNN-IKTGILPGEGAFYGPK 482

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           FEY LKDAIGR+WQCGT QVDFNLP RF AFY++  SEK  PVMIHRA+ GS+ERF+GI+
Sbjct: 483 FEYTLKDAIGREWQCGTTQVDFNLPERFGAFYIDKDSEKRQPVMIHRAICGSMERFLGIL 542

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IENF G++PLW +P+Q +V TITS A EYA + A  LK+  L + TD RNE INYK+REH
Sbjct: 543 IENFAGHMPLWFAPVQVVVATITSDADEYAAQAAAKLKAAGLQVSTDLRNEKINYKVREH 602

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPD 649
           S++K+P+I++CG +EA E ++ +RR GS   + ++L +AI  L +E+ PPD
Sbjct: 603 SLQKVPVILVCGKREAEENTVNMRRLGSRDQESMTLDEAIARLVEEATPPD 653


>gi|254693779|ref|ZP_05155607.1| threonyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
 gi|261214058|ref|ZP_05928339.1| threonine-tRNA ligase [Brucella abortus bv. 3 str. Tulya]
 gi|260915665|gb|EEX82526.1| threonine-tRNA ligase [Brucella abortus bv. 3 str. Tulya]
          Length = 658

 Score =  882 bits (2278), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 405/651 (62%), Positives = 518/651 (79%), Gaps = 3/651 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M + + L FPDGS++ +    TG+ +AESIS+SLAKKAVA A++G V DLSDP+   G +
Sbjct: 1   MSNTVSLQFPDGSVREYDASMTGAALAESISKSLAKKAVAYAVDGTVRDLSDPLGASGKV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT EDPR+L +IRH  AH++AEAVQ ++P  QV IGP+IE+GFYYDF + +PF+ D+L
Sbjct: 61  EIITREDPRALELIRHDTAHVLAEAVQELFPGTQVTIGPVIENGFYYDFARNEPFTLDDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM+EII R+ PF K+  S EKA+++F  K E+YKVE++++IPA +++ +Y QG+W
Sbjct: 121 PVIEKKMREIIQRNKPFTKEVWSREKAKQVFSDKGESYKVELVDAIPAGQDLKIYYQGDW 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPH+ STGQ+   FKLMKVAGAYWRGD+N PML+RIYGTA+    +L  YL+ LE
Sbjct: 181 FDLCRGPHMASTGQIGNSFKLMKVAGAYWRGDANNPMLTRIYGTAFANDNDLQAYLHMLE 240

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+EKRDHR+L REMDLFH  E+G GV+FWH KGWK+FQ L+SYMRR++    Y+E+NTPQ
Sbjct: 241 EAEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDSHGYQEVNTPQ 300

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           VLD+ LW+ SGHW  YR NMF V  A D   D R FALKPMNCPGHV +F HGLKSYR+L
Sbjct: 301 VLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIFKHGLKSYRDL 360

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P++LAEFG+V+R EPSG+LHGLMRVRGFTQDDAH+FCT+EQM  ECL I++LI+S+YKDF
Sbjct: 361 PIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQMAAECLHINDLILSVYKDF 420

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE+I +KLSTRPEKRVGSD LWD AE++M  VL+ I+  S + I TG+L GEGAFYGPK
Sbjct: 421 GFEEITIKLSTRPEKRVGSDELWDRAESVMMTVLEQIRQQSNN-IKTGILPGEGAFYGPK 479

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           FEY LKDAIGR+WQCGT QVDFNLP RF AFY+ + SEK  PVMIHRA+ GS+ERF+GI+
Sbjct: 480 FEYTLKDAIGREWQCGTTQVDFNLPERFGAFYIGADSEKKQPVMIHRAICGSMERFLGIL 539

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IENF G++PLW +P+Q +V TITS A EYA+E A  LK+  L + TD RNE INYK+REH
Sbjct: 540 IENFAGHMPLWFAPVQVVVATITSDADEYAKEAAAKLKAAGLQVVTDLRNEKINYKVREH 599

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPD 649
           S++K+P+I++CG +EA E+++ +RR GS   + ++L +AI  L +E+ PPD
Sbjct: 600 SLQKVPVILVCGKREAEEKTVNMRRLGSRDQESMTLDEAIARLCEEATPPD 650


>gi|23501949|ref|NP_698076.1| threonyl-tRNA synthetase [Brucella suis 1330]
 gi|161619021|ref|YP_001592908.1| threonyl-tRNA synthetase [Brucella canis ATCC 23365]
 gi|163843337|ref|YP_001627741.1| threonyl-tRNA synthetase [Brucella suis ATCC 23445]
 gi|254704361|ref|ZP_05166189.1| threonyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
 gi|254710151|ref|ZP_05171962.1| threonyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|254714150|ref|ZP_05175961.1| threonyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|254716792|ref|ZP_05178603.1| threonyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|256031646|ref|ZP_05445260.1| threonyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
 gi|256061156|ref|ZP_05451310.1| threonyl-tRNA synthetase [Brucella neotomae 5K33]
 gi|256369496|ref|YP_003107004.1| threonyl-tRNA synthetase [Brucella microti CCM 4915]
 gi|260168776|ref|ZP_05755587.1| threonyl-tRNA synthetase [Brucella sp. F5/99]
 gi|260566393|ref|ZP_05836863.1| threonyl-tRNA synthetase [Brucella suis bv. 4 str. 40]
 gi|261218590|ref|ZP_05932871.1| threonyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|261317705|ref|ZP_05956902.1| threonyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|261321913|ref|ZP_05961110.1| threonyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|261325162|ref|ZP_05964359.1| threonyl-tRNA synthetase [Brucella neotomae 5K33]
 gi|261755033|ref|ZP_05998742.1| threonyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
 gi|261758257|ref|ZP_06001966.1| threonyl-tRNA synthetase [Brucella sp. F5/99]
 gi|265988738|ref|ZP_06101295.1| threonyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
 gi|38258386|sp|Q8G0L8|SYT_BRUSU RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|189083599|sp|A9M582|SYT_BRUC2 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|189083600|sp|B0CGM0|SYT_BRUSI RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|23347895|gb|AAN29991.1| threonyl-tRNA synthetase [Brucella suis 1330]
 gi|161335832|gb|ABX62137.1| threonyl-tRNA synthetase [Brucella canis ATCC 23365]
 gi|163674060|gb|ABY38171.1| threonyl-tRNA synthetase [Brucella suis ATCC 23445]
 gi|255999656|gb|ACU48055.1| threonyl-tRNA synthetase [Brucella microti CCM 4915]
 gi|260155911|gb|EEW90991.1| threonyl-tRNA synthetase [Brucella suis bv. 4 str. 40]
 gi|260923679|gb|EEX90247.1| threonyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|261294603|gb|EEX98099.1| threonyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|261296928|gb|EEY00425.1| threonyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|261301142|gb|EEY04639.1| threonyl-tRNA synthetase [Brucella neotomae 5K33]
 gi|261738241|gb|EEY26237.1| threonyl-tRNA synthetase [Brucella sp. F5/99]
 gi|261744786|gb|EEY32712.1| threonyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
 gi|264660935|gb|EEZ31196.1| threonyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
          Length = 658

 Score =  882 bits (2278), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 404/651 (62%), Positives = 518/651 (79%), Gaps = 3/651 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M + + L FPDGS++ +    TG+ +AESIS+SLAKKAVA A++G V DLSDP+   G +
Sbjct: 1   MSNTVSLQFPDGSVREYDASMTGAALAESISKSLAKKAVAYAVDGTVRDLSDPLGASGKV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT EDPR+L +IRH  AH++AEAVQ ++P  QV IGP+IE+GFYYDF + +PF+ D+L
Sbjct: 61  EIITREDPRALELIRHDTAHVLAEAVQELFPGTQVTIGPVIENGFYYDFARNEPFTLDDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM+EII R+ PF K+  S EKA+++F  K E+YKVE++++IPA +++ +Y QG+W
Sbjct: 121 PVIEKKMREIIQRNKPFTKEVWSREKAKQVFSDKGESYKVELVDAIPAGQDLKIYYQGDW 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPH+ STGQ+   FKLMKVAGAYWRGD+N PML+RIYGTA+    +L  YL+ LE
Sbjct: 181 FDLCRGPHMASTGQIGNSFKLMKVAGAYWRGDANNPMLTRIYGTAFANDNDLQAYLHMLE 240

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+EKRDHR+L REMDLFH  E+G GV+FWH KGWK+FQ L+SYMRR++    Y+E+N PQ
Sbjct: 241 EAEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDSHGYQEVNAPQ 300

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           VLD+ LW+ SGHW  YR NMF V  A D   D R FALKPMNCPGHV +F HGLKSYR+L
Sbjct: 301 VLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIFKHGLKSYRDL 360

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P++LAEFG+V+R EPSG+LHGLMRVRGFTQDDAH+FCT+EQM  ECL+I++LI+S+YKDF
Sbjct: 361 PIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQMAAECLRINDLILSVYKDF 420

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE+I +KLSTRPEKRVGSD LWD AE++M  VL+ I+  S + I TG+L GEGAFYGPK
Sbjct: 421 GFEEITIKLSTRPEKRVGSDELWDRAESVMMTVLEQIRQQSNN-IKTGILPGEGAFYGPK 479

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           FEY LKDAIGR+WQCGT QVDFNLP RF AFY+ + SEK  PVMIHRA+ GS+ERF+GI+
Sbjct: 480 FEYTLKDAIGREWQCGTTQVDFNLPERFGAFYIGADSEKKQPVMIHRAICGSMERFLGIL 539

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IENF G++PLW +P+Q +V TITS A EYA+E A  LK+  L + TD RNE INYK+REH
Sbjct: 540 IENFAGHMPLWFAPVQVVVATITSDADEYAKEAAAKLKAAGLQVVTDLRNEKINYKVREH 599

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPD 649
           S++K+P+I++CG +EA E+++ +RR GS   + ++L +AI  L +E+ PPD
Sbjct: 600 SLQKVPVILVCGKREAEEKTVNMRRLGSRDQESMTLDEAIARLCEEATPPD 650


>gi|260754807|ref|ZP_05867155.1| threonine-tRNA ligase [Brucella abortus bv. 6 str. 870]
 gi|260758029|ref|ZP_05870377.1| threonine-tRNA ligase [Brucella abortus bv. 4 str. 292]
 gi|260761852|ref|ZP_05874195.1| threonine-tRNA ligase [Brucella abortus bv. 2 str. 86/8/59]
 gi|297248387|ref|ZP_06932105.1| threonyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196]
 gi|260668347|gb|EEX55287.1| threonine-tRNA ligase [Brucella abortus bv. 4 str. 292]
 gi|260672284|gb|EEX59105.1| threonine-tRNA ligase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260674915|gb|EEX61736.1| threonine-tRNA ligase [Brucella abortus bv. 6 str. 870]
 gi|297175556|gb|EFH34903.1| threonyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196]
          Length = 660

 Score =  881 bits (2277), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 405/651 (62%), Positives = 518/651 (79%), Gaps = 3/651 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M + + L FPDGS++ +    TG+ +AESIS+SLAKKAVA A++G V DLSDP+   G +
Sbjct: 3   MSNTVSLQFPDGSVREYDASMTGAALAESISKSLAKKAVAYAVDGTVRDLSDPLGASGKL 62

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT EDPR+L +IRH  AH++AEAVQ ++P  QV IGP+IE+GFYYDF + +PF+ D+L
Sbjct: 63  EIITREDPRALELIRHDTAHVLAEAVQELFPGTQVTIGPVIENGFYYDFARNEPFTLDDL 122

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM+EII R+ PF K+  S EKA+++F  K E+YKVE++++IPA +++ +Y QG+W
Sbjct: 123 PVIEKKMREIIQRNKPFTKEVWSREKAKQVFSDKGESYKVELVDAIPAGQDLKIYYQGDW 182

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPH+ STGQ+   FKLMKVAGAYWRGD+N PML+RIYGTA+    +L  YL+ LE
Sbjct: 183 FDLCRGPHMASTGQIGNSFKLMKVAGAYWRGDANNPMLTRIYGTAFANDNDLQAYLHMLE 242

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+EKRDHR+L REMDLFH  E+G GV+FWH KGWK+FQ L+SYMRR++    Y+E+NTPQ
Sbjct: 243 EAEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDSHGYQEVNTPQ 302

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           VLD+ LW+ SGHW  YR NMF V  A D   D R FALKPMNCPGHV +F HGLKSYR+L
Sbjct: 303 VLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIFKHGLKSYRDL 362

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P++LAEFG+V+R EPSG+LHGLMRVRGFTQDDAH+FCT+EQM  ECL I++LI+S+YKDF
Sbjct: 363 PIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQMAAECLHINDLILSVYKDF 422

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE+I +KLSTRPEKRVGSD LWD AE++M  VL+ I+  S + I TG+L GEGAFYGPK
Sbjct: 423 GFEEITIKLSTRPEKRVGSDELWDRAESVMMTVLEQIRQQSNN-IKTGILPGEGAFYGPK 481

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           FEY LKDAIGR+WQCGT QVDFNLP RF AFY+ + SEK  PVMIHRA+ GS+ERF+GI+
Sbjct: 482 FEYTLKDAIGREWQCGTTQVDFNLPERFGAFYIGADSEKKQPVMIHRAICGSMERFLGIL 541

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IENF G++PLW +P+Q +V TITS A EYA+E A  LK+  L + TD RNE INYK+REH
Sbjct: 542 IENFAGHMPLWFAPVQVVVATITSDADEYAKEAAAKLKAAGLQVVTDLRNEKINYKVREH 601

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPD 649
           S++K+P+I++CG +EA E+++ +RR GS   + ++L +AI  L +E+ PPD
Sbjct: 602 SLQKVPVILVCGKREAEEKTVNMRRLGSRDQESMTLDEAIARLCEEATPPD 652


>gi|256159790|ref|ZP_05457533.1| threonyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|256255048|ref|ZP_05460584.1| threonyl-tRNA synthetase [Brucella ceti B1/94]
 gi|261222239|ref|ZP_05936520.1| threonyl-tRNA synthetase [Brucella ceti B1/94]
 gi|265998203|ref|ZP_06110760.1| threonyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|260920823|gb|EEX87476.1| threonyl-tRNA synthetase [Brucella ceti B1/94]
 gi|262552671|gb|EEZ08661.1| threonyl-tRNA synthetase [Brucella ceti M490/95/1]
          Length = 658

 Score =  881 bits (2277), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 404/651 (62%), Positives = 518/651 (79%), Gaps = 3/651 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M + + L FPDGS++ +    TG+ +AESIS+SLAKKAVA A++G V DLSDP+   G +
Sbjct: 1   MSNTVSLQFPDGSVREYDASMTGAALAESISKSLAKKAVAYAVDGTVRDLSDPLGASGKV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT EDPR+L +IRH  AH++AEAVQ ++P  QV IGP+IE+GFYYDF + +PF+ D+L
Sbjct: 61  EIITREDPRALELIRHDTAHVLAEAVQELFPGTQVTIGPVIENGFYYDFARNEPFTLDDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM+EII R+ PF K+  S EKA+++F  K E+YKVE++++IPA +++ +Y QG+W
Sbjct: 121 PVIEKKMREIIQRNKPFTKEVWSREKAKQVFSDKGESYKVELVDAIPAGQDLKIYYQGDW 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPH+ STGQ+   FKLMKVAGAYWRGD+N PML+RIYGTA+    +L  YL+ LE
Sbjct: 181 FDLCRGPHMASTGQIGNSFKLMKVAGAYWRGDANNPMLTRIYGTAFANDNDLQAYLHMLE 240

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+EKRDHR+L REMDLFH  E+G GV+FWH KGWK+FQ L+SYMRR++    Y+E+N PQ
Sbjct: 241 EAEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDSHGYQEVNAPQ 300

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           VLD+ LW+ SGHW  YR NMF V  A D   D R FALKPMNCPGHV +F HGLKSYR+L
Sbjct: 301 VLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIFKHGLKSYRDL 360

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P++LAEFG+V+R EPSG+LHGLMRVRGFTQDDAH+FCT+EQM  ECL+I++LI+S+YKDF
Sbjct: 361 PIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQMAAECLRINDLILSVYKDF 420

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE+I +KLSTRPEKRVGSD LWD AE++M  VL+ I+  S + I TG+L GEGAFYGPK
Sbjct: 421 GFEEITIKLSTRPEKRVGSDELWDRAESVMMTVLEQIRQQSNN-IKTGILPGEGAFYGPK 479

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           FEY LKDAIGR+WQCGT QVDFNLP RF AFY+ + SEK  PVMIHRA+ GS+ERF+GI+
Sbjct: 480 FEYTLKDAIGREWQCGTTQVDFNLPKRFGAFYIGADSEKKQPVMIHRAICGSMERFLGIL 539

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IENF G++PLW +P+Q +V TITS A EYA+E A  LK+  L + TD RNE INYK+REH
Sbjct: 540 IENFAGHMPLWFAPVQVVVATITSDADEYAKEAAAKLKAAGLQVVTDLRNEKINYKVREH 599

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPD 649
           S++K+P+I++CG +EA E+++ +RR GS   + ++L +AI  L +E+ PPD
Sbjct: 600 SLQKVPVILVCGKREAEEKTVNMRRLGSRDQESMTLDEAIARLCEEATPPD 650


>gi|62289987|ref|YP_221780.1| threonyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941]
 gi|82699915|ref|YP_414489.1| threonyl-tRNA synthetase [Brucella melitensis biovar Abortus 2308]
 gi|189024229|ref|YP_001934997.1| threonyl-tRNA synthetase [Brucella abortus S19]
 gi|254689295|ref|ZP_05152549.1| threonyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
 gi|254697431|ref|ZP_05159259.1| threonyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
 gi|254730329|ref|ZP_05188907.1| threonyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
 gi|256257545|ref|ZP_05463081.1| threonyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|260545263|ref|ZP_05821004.1| threonyl-tRNA synthetase [Brucella abortus NCTC 8038]
 gi|260883825|ref|ZP_05895439.1| threonyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|73919775|sp|Q57D65|SYT_BRUAB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|123740930|sp|Q2YQ07|SYT_BRUA2 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|238689368|sp|B2S5S6|SYT_BRUA1 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|62196119|gb|AAX74419.1| ThrS, threonyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941]
 gi|82616016|emb|CAJ11049.1| tRNA synthetases, class-II (G, H, P and S):Prolyl-tRNA synthetase,
           class IIa:Threonyl-tRNA synthetase, class IIa:TGS
           domain:A [Brucella melitensis biovar Abortus 2308]
 gi|189019801|gb|ACD72523.1| threonyl-tRNA synthetase [Brucella abortus S19]
 gi|260096670|gb|EEW80545.1| threonyl-tRNA synthetase [Brucella abortus NCTC 8038]
 gi|260873353|gb|EEX80422.1| threonyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
          Length = 658

 Score =  881 bits (2277), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 405/651 (62%), Positives = 518/651 (79%), Gaps = 3/651 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M + + L FPDGS++ +    TG+ +AESIS+SLAKKAVA A++G V DLSDP+   G +
Sbjct: 1   MSNTVSLQFPDGSVREYDASMTGAALAESISKSLAKKAVAYAVDGTVRDLSDPLGASGKL 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT EDPR+L +IRH  AH++AEAVQ ++P  QV IGP+IE+GFYYDF + +PF+ D+L
Sbjct: 61  EIITREDPRALELIRHDTAHVLAEAVQELFPGTQVTIGPVIENGFYYDFARNEPFTLDDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM+EII R+ PF K+  S EKA+++F  K E+YKVE++++IPA +++ +Y QG+W
Sbjct: 121 PVIEKKMREIIQRNKPFTKEVWSREKAKQVFSDKGESYKVELVDAIPAGQDLKIYYQGDW 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPH+ STGQ+   FKLMKVAGAYWRGD+N PML+RIYGTA+    +L  YL+ LE
Sbjct: 181 FDLCRGPHMASTGQIGNSFKLMKVAGAYWRGDANNPMLTRIYGTAFANDNDLQAYLHMLE 240

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+EKRDHR+L REMDLFH  E+G GV+FWH KGWK+FQ L+SYMRR++    Y+E+NTPQ
Sbjct: 241 EAEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDSHGYQEVNTPQ 300

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           VLD+ LW+ SGHW  YR NMF V  A D   D R FALKPMNCPGHV +F HGLKSYR+L
Sbjct: 301 VLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIFKHGLKSYRDL 360

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P++LAEFG+V+R EPSG+LHGLMRVRGFTQDDAH+FCT+EQM  ECL I++LI+S+YKDF
Sbjct: 361 PIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQMAAECLHINDLILSVYKDF 420

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE+I +KLSTRPEKRVGSD LWD AE++M  VL+ I+  S + I TG+L GEGAFYGPK
Sbjct: 421 GFEEITIKLSTRPEKRVGSDELWDRAESVMMTVLEQIRQQSNN-IKTGILPGEGAFYGPK 479

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           FEY LKDAIGR+WQCGT QVDFNLP RF AFY+ + SEK  PVMIHRA+ GS+ERF+GI+
Sbjct: 480 FEYTLKDAIGREWQCGTTQVDFNLPERFGAFYIGADSEKKQPVMIHRAICGSMERFLGIL 539

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IENF G++PLW +P+Q +V TITS A EYA+E A  LK+  L + TD RNE INYK+REH
Sbjct: 540 IENFAGHMPLWFAPVQVVVATITSDADEYAKEAAAKLKAAGLQVVTDLRNEKINYKVREH 599

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPD 649
           S++K+P+I++CG +EA E+++ +RR GS   + ++L +AI  L +E+ PPD
Sbjct: 600 SLQKVPVILVCGKREAEEKTVNMRRLGSRDQESMTLDEAIARLCEEATPPD 650


>gi|239831910|ref|ZP_04680239.1| threonyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301]
 gi|239824177|gb|EEQ95745.1| threonyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301]
          Length = 674

 Score =  881 bits (2276), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 403/651 (61%), Positives = 515/651 (79%), Gaps = 3/651 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M + + + FPDGS++ +    TG+ +AESIS+SLAKKAVA A++G V DLSDP+   G +
Sbjct: 17  MSNTVSMQFPDGSVREYDASMTGAGLAESISKSLAKKAVAYAVDGTVRDLSDPLGASGKV 76

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EI+T EDPR+L +IRH  AH++AEAVQ ++P  QV IGP+IE+GFYYDF + +PF+ D+L
Sbjct: 77  EILTREDPRALELIRHDTAHVLAEAVQELFPGTQVTIGPVIENGFYYDFARNEPFTPDDL 136

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM+EII R+ PF K+  S EKA+++F  K E YKVE++++IPA +++ +Y QG+W
Sbjct: 137 PVIEKKMREIIQRNKPFTKEIWSREKAKQVFADKGENYKVELVDAIPAGQDLKIYYQGDW 196

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPH+ STGQ+   FKLMKVAGAYWRGD+N PML+RIYGTA+    +L  YL+ LE
Sbjct: 197 FDLCRGPHMASTGQIGNSFKLMKVAGAYWRGDANNPMLTRIYGTAFANDNDLQAYLHMLE 256

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+EKRDHR+L REMDLFH  E+G GV+FWH KGWK+FQ L+SYMRR++    Y+E+N PQ
Sbjct: 257 EAEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDSHGYQEVNAPQ 316

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           VLD+ LW+ SGHW  YR NMF V  A D   D R FALKPMNCPGHV +F HGLKSYR+L
Sbjct: 317 VLDKSLWETSGHWGWYRDNMFKVTVAGDETDDDRVFALKPMNCPGHVQIFKHGLKSYRDL 376

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P++LAEFG+V+R EPSG+LHGLMRVRGFTQDDAH+FCT+EQM  ECL+I++LI+S+YKDF
Sbjct: 377 PIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQMAAECLRINDLILSVYKDF 436

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE+I +KLSTRPEKRVGSD LWD AE++M  VLD I+  S + I TGVL GEGAFYGPK
Sbjct: 437 GFEEITIKLSTRPEKRVGSDELWDRAESVMMSVLDQIQQQSNN-IKTGVLPGEGAFYGPK 495

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           FEY LKDAIGR+WQCGT QVDFNLP RF AFY++  SEK  PVMIHRA+ GS+ERF+GI+
Sbjct: 496 FEYTLKDAIGREWQCGTTQVDFNLPERFGAFYIDKDSEKRQPVMIHRAICGSMERFLGIL 555

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IENF G++PLW +P+Q +V TITS A EYA + A  LK+  L + TD RNE INYK+REH
Sbjct: 556 IENFAGHMPLWFAPVQVVVATITSDADEYAAQAAAKLKAAGLQVATDLRNEKINYKVREH 615

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPD 649
           S++K+P+I++CG +EA E ++ +RR GS   + ++L +AI  L +E+ PPD
Sbjct: 616 SLQKVPVILVCGKREAEENTVNMRRLGSRDQESMTLDEAIARLVEEATPPD 666


>gi|254701818|ref|ZP_05163646.1| threonyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
          Length = 658

 Score =  881 bits (2276), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 404/651 (62%), Positives = 518/651 (79%), Gaps = 3/651 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M + + L FPDGS++ +    TG+ +AESIS+SLAKKAVA A++G V DLSDP+   G +
Sbjct: 1   MSNTVSLQFPDGSVREYDASMTGAALAESISKSLAKKAVAYAVDGTVRDLSDPLGASGKV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT EDPR+L +IRH  AH++AEAVQ ++P  QV IGP+IE+GFYYDF + +PF+ D+L
Sbjct: 61  EIITREDPRALELIRHDTAHVLAEAVQELFPGTQVTIGPVIENGFYYDFARNEPFTLDDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM+EII R+ PF K+  S EKA+++F  K E+YKVE++++IPA +++ +Y QG+W
Sbjct: 121 PVIEKKMREIIQRNKPFTKEVWSREKAKQVFSDKGESYKVELVDAIPAGQDLKIYYQGDW 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPH+ STGQ+   FKLMKVAGAYWRGD+N PML+RIYGTA+    +L  YL+ LE
Sbjct: 181 FDLCRGPHMASTGQIGNSFKLMKVAGAYWRGDANNPMLTRIYGTAFANDNDLQAYLHMLE 240

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+EKRDHR+L REMDLFH  E+G GV+FWH KGWK+FQ L+SYMRR++    Y+E+N PQ
Sbjct: 241 EAEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQKLVSYMRRRLDSHGYQEVNAPQ 300

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           VLD+ LW+ SGHW  YR NMF V  A D   D R FALKPMNCPGHV +F HGLKSYR+L
Sbjct: 301 VLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIFKHGLKSYRDL 360

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P++LAEFG+V+R EPSG+LHGLMRVRGFTQDDAH+FCT+EQM  ECL+I++LI+S+YKDF
Sbjct: 361 PIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQMAAECLRINDLILSVYKDF 420

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE+I +KLSTRPEKRVGSD LWD AE++M  VL+ I+  S + I TG+L GEGAFYGPK
Sbjct: 421 GFEEITIKLSTRPEKRVGSDELWDRAESVMMTVLEQIRQQSNN-IKTGILPGEGAFYGPK 479

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           FEY LKDAIGR+WQCGT QVDFNLP RF AFY+ + SEK  PVMIHRA+ GS+ERF+GI+
Sbjct: 480 FEYTLKDAIGREWQCGTTQVDFNLPERFGAFYIGADSEKKQPVMIHRAICGSMERFLGIL 539

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IENF G++PLW +P+Q +V TITS A EYA+E A  LK+  L + TD RNE INYK+REH
Sbjct: 540 IENFAGHMPLWFAPVQVVVATITSDADEYAKEAAAKLKAAGLQVVTDLRNEKINYKVREH 599

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPD 649
           S++K+P+I++CG +EA E+++ +RR GS   + ++L +AI  L +E+ PPD
Sbjct: 600 SLQKVPVILVCGKREAEEKTVNMRRLGSRDQESMTLDEAIARLCEEATPPD 650


>gi|225627544|ref|ZP_03785581.1| threonyl-tRNA synthetase [Brucella ceti str. Cudo]
 gi|225617549|gb|EEH14594.1| threonyl-tRNA synthetase [Brucella ceti str. Cudo]
          Length = 693

 Score =  881 bits (2276), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 404/651 (62%), Positives = 518/651 (79%), Gaps = 3/651 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M + + L FPDGS++ +    TG+ +AESIS+SLAKKAVA A++G V DLSDP+   G +
Sbjct: 36  MSNTVSLQFPDGSVREYDASMTGAALAESISKSLAKKAVAYAVDGTVRDLSDPLGASGKV 95

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT EDPR+L +IRH  AH++AEAVQ ++P  QV IGP+IE+GFYYDF + +PF+ D+L
Sbjct: 96  EIITREDPRALELIRHDTAHVLAEAVQELFPGTQVTIGPVIENGFYYDFARNEPFTLDDL 155

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM+EII R+ PF K+  S EKA+++F  K E+YKVE++++IPA +++ +Y QG+W
Sbjct: 156 PVIEKKMREIIQRNKPFTKEVWSREKAKQVFSDKGESYKVELVDAIPAGQDLKIYYQGDW 215

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPH+ STGQ+   FKLMKVAGAYWRGD+N PML+RIYGTA+    +L  YL+ LE
Sbjct: 216 FDLCRGPHMASTGQIGNSFKLMKVAGAYWRGDANNPMLTRIYGTAFANDNDLQAYLHMLE 275

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+EKRDHR+L REMDLFH  E+G GV+FWH KGWK+FQ L+SYMRR++    Y+E+N PQ
Sbjct: 276 EAEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDSHGYQEVNAPQ 335

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           VLD+ LW+ SGHW  YR NMF V  A D   D R FALKPMNCPGHV +F HGLKSYR+L
Sbjct: 336 VLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIFKHGLKSYRDL 395

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P++LAEFG+V+R EPSG+LHGLMRVRGFTQDDAH+FCT+EQM  ECL+I++LI+S+YKDF
Sbjct: 396 PIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQMAAECLRINDLILSVYKDF 455

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE+I +KLSTRPEKRVGSD LWD AE++M  VL+ I+  S + I TG+L GEGAFYGPK
Sbjct: 456 GFEEITIKLSTRPEKRVGSDELWDRAESVMMTVLEQIRQQSNN-IKTGILPGEGAFYGPK 514

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           FEY LKDAIGR+WQCGT QVDFNLP RF AFY+ + SEK  PVMIHRA+ GS+ERF+GI+
Sbjct: 515 FEYTLKDAIGREWQCGTTQVDFNLPERFGAFYIGADSEKKQPVMIHRAICGSMERFLGIL 574

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IENF G++PLW +P+Q +V TITS A EYA+E A  LK+  L + TD RNE INYK+REH
Sbjct: 575 IENFAGHMPLWFAPVQVVVATITSDADEYAKEAAAKLKAAGLQVVTDLRNEKINYKVREH 634

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPD 649
           S++K+P+I++CG +EA E+++ +RR GS   + ++L +AI  L +E+ PPD
Sbjct: 635 SLQKVPVILVCGKREAEEKTVNMRRLGSRDQESMTLDEAIARLCEEATPPD 685


>gi|307945488|ref|ZP_07660824.1| threonyl-tRNA synthetase [Roseibium sp. TrichSKD4]
 gi|307771361|gb|EFO30586.1| threonyl-tRNA synthetase [Roseibium sp. TrichSKD4]
          Length = 656

 Score =  881 bits (2276), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 399/655 (60%), Positives = 514/655 (78%), Gaps = 8/655 (1%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           I+LTFPD S++ F    +G+DVA SIS+SLAKKAVAVA++G++ DLSD + + S IEI+T
Sbjct: 2   IQLTFPDNSVREFEDGVSGADVAASISKSLAKKAVAVALDGELADLSDTISKNSTIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQP-------FSS 116
            +DPR++ +IRH  AH++AEAVQ +WP  QV IGP+IE+GFYYDF +  P       F++
Sbjct: 62  RDDPRAVELIRHDAAHVLAEAVQELWPGTQVTIGPVIENGFYYDFKRVHPDTKENWPFAT 121

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
           D+L  IEKKM+EII R+ PF K+  S E+A+++F    E YKVE++++IP  +++ +Y+Q
Sbjct: 122 DDLEVIEKKMREIIQRNQPFTKELWSREEAKKVFAEMGEDYKVELVDAIPEDQDIKIYKQ 181

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           G+WFDLCRGPH+ +TG++   FKLMKVAGAYWRGDSN PMLSRIYGTA+   ++L  YL+
Sbjct: 182 GDWFDLCRGPHMDATGRIGTAFKLMKVAGAYWRGDSNNPMLSRIYGTAFANDKDLKAYLH 241

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINT 296
            LEE+EKRDHRKL REMDLFH  E+G GV+FWH KGW +FQ L+SYMRR++  DY+E+N 
Sbjct: 242 MLEEAEKRDHRKLGREMDLFHFQEEGPGVVFWHDKGWTLFQNLVSYMRRRLSGDYQEVNA 301

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           PQVL   LW+ SGHW  Y+ NMFAV+ AD   +D   FALKPMNCPGH+ +F HGLKSYR
Sbjct: 302 PQVLSTKLWETSGHWAWYKENMFAVQGADPEDEDTHVFALKPMNCPGHIQIFKHGLKSYR 361

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +LP+R+AEFG V+R EPSG++HGLMRVRGFTQDDAHVFCT EQM  ECLKI++LI+S+Y+
Sbjct: 362 DLPLRMAEFGVVHRYEPSGAMHGLMRVRGFTQDDAHVFCTDEQMAEECLKINDLILSVYE 421

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
            FGFEKI+VKLSTRPEKRVGSD LWD AE +M  VL+ IK  S  R+ T +L GEGAFYG
Sbjct: 422 HFGFEKIVVKLSTRPEKRVGSDELWDHAEEVMGKVLEQIKEQSGGRVETDILPGEGAFYG 481

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PKFEY L+DAIGR+WQCGT QVDFNLP RF AFYV+++ EK  PVMIHRA+ GS+ERF+G
Sbjct: 482 PKFEYTLRDAIGREWQCGTTQVDFNLPERFGAFYVDNNGEKQTPVMIHRAICGSMERFLG 541

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           I+IEN+ G+ PLWL+P+Q +V TITS A +Y +E+A  L++  L +ETDFRNE INYK+R
Sbjct: 542 ILIENYSGHFPLWLAPLQVVVATITSEADDYGREVAGKLRAAGLKVETDFRNEKINYKVR 601

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           EHS+ K+P I++CG +EA E+S+ IRR GS     +SL +AI     E++PPD +
Sbjct: 602 EHSLAKVPAIVVCGMREAEEKSVNIRRLGSKHQTAMSLDEAIEAFRSEAVPPDLK 656


>gi|237815491|ref|ZP_04594489.1| threonyl-tRNA synthetase [Brucella abortus str. 2308 A]
 gi|237790328|gb|EEP64538.1| threonyl-tRNA synthetase [Brucella abortus str. 2308 A]
          Length = 693

 Score =  881 bits (2276), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 405/651 (62%), Positives = 518/651 (79%), Gaps = 3/651 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M + + L FPDGS++ +    TG+ +AESIS+SLAKKAVA A++G V DLSDP+   G +
Sbjct: 36  MSNTVSLQFPDGSVREYDASMTGAALAESISKSLAKKAVAYAVDGTVRDLSDPLGASGKL 95

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT EDPR+L +IRH  AH++AEAVQ ++P  QV IGP+IE+GFYYDF + +PF+ D+L
Sbjct: 96  EIITREDPRALELIRHDTAHVLAEAVQELFPGTQVTIGPVIENGFYYDFARNEPFTLDDL 155

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM+EII R+ PF K+  S EKA+++F  K E+YKVE++++IPA +++ +Y QG+W
Sbjct: 156 PVIEKKMREIIQRNKPFTKEVWSREKAKQVFSDKGESYKVELVDAIPAGQDLKIYYQGDW 215

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPH+ STGQ+   FKLMKVAGAYWRGD+N PML+RIYGTA+    +L  YL+ LE
Sbjct: 216 FDLCRGPHMASTGQIGNSFKLMKVAGAYWRGDANNPMLTRIYGTAFANDNDLQAYLHMLE 275

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+EKRDHR+L REMDLFH  E+G GV+FWH KGWK+FQ L+SYMRR++    Y+E+NTPQ
Sbjct: 276 EAEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDSHGYQEVNTPQ 335

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           VLD+ LW+ SGHW  YR NMF V  A D   D R FALKPMNCPGHV +F HGLKSYR+L
Sbjct: 336 VLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIFKHGLKSYRDL 395

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P++LAEFG+V+R EPSG+LHGLMRVRGFTQDDAH+FCT+EQM  ECL I++LI+S+YKDF
Sbjct: 396 PIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQMAAECLHINDLILSVYKDF 455

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE+I +KLSTRPEKRVGSD LWD AE++M  VL+ I+  S + I TG+L GEGAFYGPK
Sbjct: 456 GFEEITIKLSTRPEKRVGSDELWDRAESVMMTVLEQIRQQSNN-IKTGILPGEGAFYGPK 514

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           FEY LKDAIGR+WQCGT QVDFNLP RF AFY+ + SEK  PVMIHRA+ GS+ERF+GI+
Sbjct: 515 FEYTLKDAIGREWQCGTTQVDFNLPERFGAFYIGADSEKKQPVMIHRAICGSMERFLGIL 574

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IENF G++PLW +P+Q +V TITS A EYA+E A  LK+  L + TD RNE INYK+REH
Sbjct: 575 IENFAGHMPLWFAPVQVVVATITSDADEYAKEAAAKLKAAGLQVVTDLRNEKINYKVREH 634

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPD 649
           S++K+P+I++CG +EA E+++ +RR GS   + ++L +AI  L +E+ PPD
Sbjct: 635 SLQKVPVILVCGKREAEEKTVNMRRLGSRDQESMTLDEAIARLCEEATPPD 685


>gi|261752375|ref|ZP_05996084.1| threonyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
 gi|261742128|gb|EEY30054.1| threonyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
          Length = 660

 Score =  881 bits (2276), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 404/651 (62%), Positives = 518/651 (79%), Gaps = 3/651 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M + + L FPDGS++ +    TG+ +AESIS+SLAKKAVA A++G V DLSDP+   G +
Sbjct: 3   MSNTVSLQFPDGSVREYDASMTGAALAESISKSLAKKAVAYAVDGTVRDLSDPLGASGKV 62

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT EDPR+L +IRH  AH++AEAVQ ++P  QV IGP+IE+GFYYDF + +PF+ D+L
Sbjct: 63  EIITREDPRALELIRHDTAHVLAEAVQELFPGTQVTIGPVIENGFYYDFARNEPFTLDDL 122

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM+EII R+ PF K+  S EKA+++F  K E+YKVE++++IPA +++ +Y QG+W
Sbjct: 123 PVIEKKMREIIQRNKPFTKEVWSREKAKQVFSDKGESYKVELVDAIPAGQDLKIYYQGDW 182

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPH+ STGQ+   FKLMKVAGAYWRGD+N PML+RIYGTA+    +L  YL+ LE
Sbjct: 183 FDLCRGPHMASTGQIGNSFKLMKVAGAYWRGDANNPMLTRIYGTAFANDNDLQAYLHMLE 242

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+EKRDHR+L REMDLFH  E+G GV+FWH KGWK+FQ L+SYMRR++    Y+E+N PQ
Sbjct: 243 EAEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQKLVSYMRRRLDSHGYQEVNAPQ 302

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           VLD+ LW+ SGHW  YR NMF V  A D   D R FALKPMNCPGHV +F HGLKSYR+L
Sbjct: 303 VLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIFKHGLKSYRDL 362

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P++LAEFG+V+R EPSG+LHGLMRVRGFTQDDAH+FCT+EQM  ECL+I++LI+S+YKDF
Sbjct: 363 PIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQMAAECLRINDLILSVYKDF 422

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE+I +KLSTRPEKRVGSD LWD AE++M  VL+ I+  S + I TG+L GEGAFYGPK
Sbjct: 423 GFEEITIKLSTRPEKRVGSDELWDRAESVMMTVLEQIRQQSNN-IKTGILPGEGAFYGPK 481

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           FEY LKDAIGR+WQCGT QVDFNLP RF AFY+ + SEK  PVMIHRA+ GS+ERF+GI+
Sbjct: 482 FEYTLKDAIGREWQCGTTQVDFNLPERFGAFYIGADSEKKQPVMIHRAICGSMERFLGIL 541

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IENF G++PLW +P+Q +V TITS A EYA+E A  LK+  L + TD RNE INYK+REH
Sbjct: 542 IENFAGHMPLWFAPVQVVVATITSDADEYAKEAAAKLKAAGLQVVTDLRNEKINYKVREH 601

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPD 649
           S++K+P+I++CG +EA E+++ +RR GS   + ++L +AI  L +E+ PPD
Sbjct: 602 SLQKVPVILVCGKREAEEKTVNMRRLGSRDQESMTLDEAIARLCEEATPPD 652


>gi|256113621|ref|ZP_05454441.1| threonyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|265994988|ref|ZP_06107545.1| threonyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|262766101|gb|EEZ11890.1| threonyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
          Length = 658

 Score =  880 bits (2275), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 404/651 (62%), Positives = 518/651 (79%), Gaps = 3/651 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M + + L FPDGS++ +    TG+ +AESIS+SLAKKAVA A++G V DLSDP+   G +
Sbjct: 1   MSNTVSLQFPDGSVREYDASMTGAALAESISKSLAKKAVAYAVDGTVRDLSDPLGASGKV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT EDPR+L +IRH  AH++AEAVQ ++P  QV IGP+IE+GFYYDF + +PF+ D+L
Sbjct: 61  EIITREDPRALELIRHDTAHVLAEAVQELFPGTQVTIGPVIENGFYYDFARNEPFTLDDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM+EII R+ PF K+  S EKA+++F  K E+YKVE++++IPA +++ +Y QG+W
Sbjct: 121 PVIEKKMREIIQRNKPFTKEVWSREKAKQVFSDKGESYKVELVDAIPAGQDLKIYYQGDW 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPH+ STGQ+   FKLMKVAGAYWRGD+N PML+RIYGTA+    +L  YL+ LE
Sbjct: 181 FDLCRGPHMASTGQIGNSFKLMKVAGAYWRGDANNPMLTRIYGTAFANDNDLQAYLHMLE 240

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+EKRDHR+L REMDLFH  E+G GV+FWH KGWK+FQ L+SYMRR++    Y+E+NTPQ
Sbjct: 241 EAEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDSHGYQEVNTPQ 300

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           VLD+ LW+ SGHW  YR NMF V  A D   D   FALKPMNCPGHV +F HGLKSYR+L
Sbjct: 301 VLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDHVFALKPMNCPGHVQIFKHGLKSYRDL 360

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P++LAEFG+V+R EPSG+LHGLMRVRGFTQDDAH+FCT+EQM  ECL+I++LI+S+YKDF
Sbjct: 361 PIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQMAAECLQINDLILSVYKDF 420

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE+I +KLSTRPEKRVGSD LWD AE++M  VL+ I+  S + I TG+L GEGAFYGPK
Sbjct: 421 GFEEITIKLSTRPEKRVGSDELWDRAESVMMTVLEQIRQQSNN-IKTGILPGEGAFYGPK 479

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           FEY LKDAIGR+WQCGT QVDFNLP RF AFY+ + SEK  PVMIHRA+ GS+ERF+GI+
Sbjct: 480 FEYTLKDAIGREWQCGTTQVDFNLPERFGAFYIGADSEKKQPVMIHRAICGSMERFLGIL 539

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IENF G++PLW +P+Q +V TITS A EYA+E A  LK+  L + TD RNE INYK+REH
Sbjct: 540 IENFAGHMPLWFAPVQVVVATITSDADEYAKEAAAKLKAAGLQVVTDLRNEKINYKVREH 599

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPD 649
           S++K+P+I++CG +EA E+++ +RR GS   + ++L +AI  L +E+ PPD
Sbjct: 600 SLQKVPVILVCGKREAEEKTVNMRRLGSRDQESMTLDEAIARLCEEATPPD 650


>gi|306843943|ref|ZP_07476538.1| threonyl-tRNA synthetase [Brucella sp. BO1]
 gi|306275698|gb|EFM57422.1| threonyl-tRNA synthetase [Brucella sp. BO1]
          Length = 658

 Score =  880 bits (2274), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 404/651 (62%), Positives = 518/651 (79%), Gaps = 3/651 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M + + L FPDGS++ +    TG+ +AESIS+SLAKKAVA A++G V DLSDP+   G +
Sbjct: 1   MSNTVSLQFPDGSVREYDASMTGAALAESISKSLAKKAVAYAVDGTVRDLSDPLGASGRV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT EDPR+L +IRH  AH++AEAVQ ++P  QV IGP+IE+GFYYDF + +PF+ D+L
Sbjct: 61  EIITREDPRALELIRHDTAHVLAEAVQELFPGTQVTIGPVIENGFYYDFARNEPFTLDDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM+EII R+ PF K+  S EKA+++F  K E+YKVE++++IPA +++ +Y QG+W
Sbjct: 121 PVIEKKMREIIQRNKPFTKEVWSREKAKQVFSDKGESYKVELVDAIPAGQDLKIYYQGDW 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPH+ STGQ+   FKLMKVAGAYWRGD+N PML+RIYGTA+    +L  YL+ LE
Sbjct: 181 FDLCRGPHMASTGQIGNSFKLMKVAGAYWRGDANNPMLTRIYGTAFANDNDLQAYLHMLE 240

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+EKRDHR+L REMDLFH  E+G GV+FWH KGWK+FQ L+SYMRR++    Y+E+N PQ
Sbjct: 241 EAEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDSHGYQEVNAPQ 300

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           VLD+ LW+ SGHW  YR NMF V  A D   D R FALKPMNCPGHV +F HGLKSYR+L
Sbjct: 301 VLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIFKHGLKSYRDL 360

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P++LAEFG+V+R EPSG+LHGLMRVRGFTQDDAH+FCT+EQM  ECL+I++LI+S+YKDF
Sbjct: 361 PIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQMAAECLRINDLILSVYKDF 420

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE+I +KLSTRPEKRVGSD LWD AE++M  VL+ I+  S + I TG+L GEGAFYGPK
Sbjct: 421 GFEEITIKLSTRPEKRVGSDELWDRAESVMMTVLEQIRQQSNN-IKTGILPGEGAFYGPK 479

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           FEY LKDAIGR+WQCGT QVDFNLP RF AFY+ + SEK  PVMIHRA+ GS+ERF+GI+
Sbjct: 480 FEYTLKDAIGREWQCGTTQVDFNLPERFGAFYIGADSEKKQPVMIHRAICGSMERFLGIL 539

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IENF G++PLW +P+Q +V TITS A EYA+E A  LK+  L + TD RNE INYK+REH
Sbjct: 540 IENFAGHMPLWFAPVQVVVATITSDADEYAKEAAAKLKAVGLQVVTDLRNEKINYKVREH 599

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPD 649
           S++K+P+I++CG +EA E+++ +RR GS   + ++L +AI  L +E+ PPD
Sbjct: 600 SLQKVPVILVCGKREAEEKTVNMRRLGSRDQESMTLDEAIARLCEEATPPD 650


>gi|326538797|gb|ADZ87012.1| threonyl-tRNA synthetase [Brucella melitensis M5-90]
          Length = 661

 Score =  880 bits (2274), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 404/651 (62%), Positives = 518/651 (79%), Gaps = 3/651 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M + + L FPDGS++ +    TG+ +AESIS+SLAKKAVA A++G V DLSDP+   G +
Sbjct: 4   MSNTVSLQFPDGSVREYDASMTGAALAESISKSLAKKAVAYAVDGTVRDLSDPLGASGKV 63

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT EDPR+L +IRH  AH++AEAVQ ++P  QV IGP+IE+GFYYDF + +PF+ D+L
Sbjct: 64  EIITREDPRALELIRHDTAHVLAEAVQELFPGTQVTIGPVIENGFYYDFARNEPFTLDDL 123

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM+EII R+ PF K+  S EKA+++F  K E+YKVE++++IPA +++ +Y QG+W
Sbjct: 124 PVIEKKMREIIQRNKPFTKEVWSREKAKQVFSDKGESYKVELVDAIPAGQDLKIYYQGDW 183

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPH+ STGQ+   FKLMKVAGAYWRGD+N PML+RIYGTA+    +L  YL+ LE
Sbjct: 184 FDLCRGPHMASTGQIGNSFKLMKVAGAYWRGDANNPMLTRIYGTAFANDNDLQAYLHMLE 243

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+EKRDHR+L REMDLFH  E+G GV+FWH KGWK+FQ L+SYMRR++    Y+E+NTPQ
Sbjct: 244 EAEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDSHGYQEVNTPQ 303

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           VLD+ LW+ SGHW  YR NMF V  A D   D R FALKPMNCPGHV +F HGLKSYR+L
Sbjct: 304 VLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIFKHGLKSYRDL 363

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P++LAEFG+V+R EPSG+LHGLMRVRGFTQDDAH+FCT+EQM  ECL+I++ I+S+YKDF
Sbjct: 364 PIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQMAAECLQINDHILSVYKDF 423

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE+I +KLSTRPEKRVGSD LWD AE++M  VL+ I+  S + I TG+L GEGAFYGPK
Sbjct: 424 GFEEITIKLSTRPEKRVGSDELWDRAESVMMTVLEQIRQQSNN-IKTGILPGEGAFYGPK 482

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           FEY LKDAIGR+WQCGT QVDFNLP RF AFY+ + SEK  PVMIHRA+ GS+ERF+GI+
Sbjct: 483 FEYTLKDAIGREWQCGTTQVDFNLPERFGAFYIGADSEKKQPVMIHRAICGSMERFLGIL 542

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IENF G++PLW +P+Q +V TITS A EYA+E A  LK+  L + TD RNE INYK+REH
Sbjct: 543 IENFAGHMPLWFAPVQVVVATITSDADEYAKEAAAKLKAAGLQVVTDLRNEKINYKVREH 602

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPD 649
           S++K+P+I++CG +EA E+++ +RR GS   + ++L +AI  L +E+ PPD
Sbjct: 603 SLQKVPVILVCGKREAEEKTVNMRRLGSRDQESMTLDEAIARLCEEATPPD 653


>gi|225852573|ref|YP_002732806.1| threonyl-tRNA synthetase [Brucella melitensis ATCC 23457]
 gi|256263936|ref|ZP_05466468.1| threonyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9]
 gi|254783511|sp|C0RJ44|SYT_BRUMB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|225640938|gb|ACO00852.1| threonyl-tRNA synthetase [Brucella melitensis ATCC 23457]
 gi|263094080|gb|EEZ18002.1| threonyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9]
          Length = 658

 Score =  880 bits (2273), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 404/651 (62%), Positives = 518/651 (79%), Gaps = 3/651 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M + + L FPDGS++ +    TG+ +AESIS+SLAKKAVA A++G V DLSDP+   G +
Sbjct: 1   MSNTVSLQFPDGSVREYDASMTGAALAESISKSLAKKAVAYAVDGTVRDLSDPLGASGKV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT EDPR+L +IRH  AH++AEAVQ ++P  QV IGP+IE+GFYYDF + +PF+ D+L
Sbjct: 61  EIITREDPRALELIRHDTAHVLAEAVQELFPGTQVTIGPVIENGFYYDFARNEPFTLDDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM+EII R+ PF K+  S EKA+++F  K E+YKVE++++IPA +++ +Y QG+W
Sbjct: 121 PVIEKKMREIIQRNKPFTKEVWSREKAKQVFSDKGESYKVELVDAIPAGQDLKIYYQGDW 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPH+ STGQ+   FKLMKVAGAYWRGD+N PML+RIYGTA+    +L  YL+ LE
Sbjct: 181 FDLCRGPHMASTGQIGNSFKLMKVAGAYWRGDANNPMLTRIYGTAFANDNDLQAYLHMLE 240

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+EKRDHR+L REMDLFH  E+G GV+FWH KGWK+FQ L+SYMRR++    Y+E+NTPQ
Sbjct: 241 EAEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDSHGYQEVNTPQ 300

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           VLD+ LW+ SGHW  YR NMF V  A D   D R FALKPMNCPGHV +F HGLKSYR+L
Sbjct: 301 VLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIFKHGLKSYRDL 360

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P++LAEFG+V+R EPSG+LHGLMRVRGFTQDDAH+FCT+EQM  ECL+I++ I+S+YKDF
Sbjct: 361 PIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQMAAECLQINDHILSVYKDF 420

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE+I +KLSTRPEKRVGSD LWD AE++M  VL+ I+  S + I TG+L GEGAFYGPK
Sbjct: 421 GFEEITIKLSTRPEKRVGSDELWDRAESVMMTVLEQIRQQSNN-IKTGILPGEGAFYGPK 479

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           FEY LKDAIGR+WQCGT QVDFNLP RF AFY+ + SEK  PVMIHRA+ GS+ERF+GI+
Sbjct: 480 FEYTLKDAIGREWQCGTTQVDFNLPERFGAFYIGADSEKKQPVMIHRAICGSMERFLGIL 539

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IENF G++PLW +P+Q +V TITS A EYA+E A  LK+  L + TD RNE INYK+REH
Sbjct: 540 IENFAGHMPLWFAPVQVVVATITSDADEYAKEAAAKLKAAGLQVVTDLRNEKINYKVREH 599

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPD 649
           S++K+P+I++CG +EA E+++ +RR GS   + ++L +AI  L +E+ PPD
Sbjct: 600 SLQKVPVILVCGKREAEEKTVNMRRLGSRDQESMTLDEAIARLCEEATPPD 650


>gi|326409092|gb|ADZ66157.1| threonyl-tRNA synthetase [Brucella melitensis M28]
          Length = 660

 Score =  880 bits (2273), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 404/651 (62%), Positives = 518/651 (79%), Gaps = 3/651 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M + + L FPDGS++ +    TG+ +AESIS+SLAKKAVA A++G V DLSDP+   G +
Sbjct: 3   MSNTVSLQFPDGSVREYDASMTGAALAESISKSLAKKAVAYAVDGTVRDLSDPLGASGKV 62

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT EDPR+L +IRH  AH++AEAVQ ++P  QV IGP+IE+GFYYDF + +PF+ D+L
Sbjct: 63  EIITREDPRALELIRHDTAHVLAEAVQELFPGTQVTIGPVIENGFYYDFARNEPFTLDDL 122

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM+EII R+ PF K+  S EKA+++F  K E+YKVE++++IPA +++ +Y QG+W
Sbjct: 123 PVIEKKMREIIQRNKPFTKEVWSREKAKQVFSDKGESYKVELVDAIPAGQDLKIYYQGDW 182

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPH+ STGQ+   FKLMKVAGAYWRGD+N PML+RIYGTA+    +L  YL+ LE
Sbjct: 183 FDLCRGPHMASTGQIGNSFKLMKVAGAYWRGDANNPMLTRIYGTAFANDNDLQAYLHMLE 242

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+EKRDHR+L REMDLFH  E+G GV+FWH KGWK+FQ L+SYMRR++    Y+E+NTPQ
Sbjct: 243 EAEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDSHGYQEVNTPQ 302

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           VLD+ LW+ SGHW  YR NMF V  A D   D R FALKPMNCPGHV +F HGLKSYR+L
Sbjct: 303 VLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIFKHGLKSYRDL 362

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P++LAEFG+V+R EPSG+LHGLMRVRGFTQDDAH+FCT+EQM  ECL+I++ I+S+YKDF
Sbjct: 363 PIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQMAAECLQINDHILSVYKDF 422

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE+I +KLSTRPEKRVGSD LWD AE++M  VL+ I+  S + I TG+L GEGAFYGPK
Sbjct: 423 GFEEITIKLSTRPEKRVGSDELWDRAESVMMTVLEQIRQQSNN-IKTGILPGEGAFYGPK 481

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           FEY LKDAIGR+WQCGT QVDFNLP RF AFY+ + SEK  PVMIHRA+ GS+ERF+GI+
Sbjct: 482 FEYTLKDAIGREWQCGTTQVDFNLPERFGAFYIGADSEKKQPVMIHRAICGSMERFLGIL 541

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IENF G++PLW +P+Q +V TITS A EYA+E A  LK+  L + TD RNE INYK+REH
Sbjct: 542 IENFAGHMPLWFAPVQVVVATITSDADEYAKEAAAKLKAAGLQVVTDLRNEKINYKVREH 601

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPD 649
           S++K+P+I++CG +EA E+++ +RR GS   + ++L +AI  L +E+ PPD
Sbjct: 602 SLQKVPVILVCGKREAEEKTVNMRRLGSRDQESMTLDEAIARLCEEATPPD 652


>gi|148560208|ref|YP_001259002.1| threonyl-tRNA synthetase [Brucella ovis ATCC 25840]
 gi|148371465|gb|ABQ61444.1| threonyl-tRNA synthetase [Brucella ovis ATCC 25840]
          Length = 693

 Score =  879 bits (2271), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 404/651 (62%), Positives = 517/651 (79%), Gaps = 3/651 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M + + L FPDGS++ +    TG+ +AESIS+SLAKKAVA A++G V DLSDP+   G +
Sbjct: 36  MSNTVSLQFPDGSVREYDASMTGAALAESISKSLAKKAVAYAVDGTVRDLSDPLGASGKV 95

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT EDPR+L +IRH  AH++AEAVQ ++P  QV IGP+IE+GFYYDF + +PF+ D+L
Sbjct: 96  EIITREDPRALELIRHDTAHVLAEAVQELFPGTQVTIGPVIENGFYYDFARNEPFTLDDL 155

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM EII R+ PF K+  S EKA+++F  K E+YKVE++++IPA +++ +Y QG+W
Sbjct: 156 PVIEKKMCEIIQRNKPFTKEVWSREKAKQVFSDKGESYKVELVDAIPAGQDLKIYYQGDW 215

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPH+ STGQ+   FKLMKVAGAYWRGD+N PML+RIYGTA+    +L  YL+ LE
Sbjct: 216 FDLCRGPHMASTGQIGNSFKLMKVAGAYWRGDANNPMLTRIYGTAFANDNDLQAYLHMLE 275

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+EKRDHR+L REMDLFH  E+G GV+FWH KGWK+FQ L+SYMRR++    Y+E+N PQ
Sbjct: 276 EAEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDSHGYQEVNAPQ 335

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           VLD+ LW+ SGHW  YR NMF V  A D   D R FALKPMNCPGHV +F HGLKSYR+L
Sbjct: 336 VLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIFKHGLKSYRDL 395

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P++LAEFG+V+R EPSG+LHGLMRVRGFTQDDAH+FCT+EQM  ECL+I++LI+S+YKDF
Sbjct: 396 PIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQMAAECLRINDLILSVYKDF 455

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE+I +KLSTRPEKRVGSD LWD AE++M  VL+ I+  S + I TG+L GEGAFYGPK
Sbjct: 456 GFEEITIKLSTRPEKRVGSDELWDRAESVMMTVLEQIRQQSNN-IKTGILPGEGAFYGPK 514

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           FEY LKDAIGR+WQCGT QVDFNLP RF AFY+ + SEK  PVMIHRA+ GS+ERF+GI+
Sbjct: 515 FEYTLKDAIGREWQCGTTQVDFNLPERFGAFYIGADSEKKQPVMIHRAICGSMERFLGIL 574

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IENF G++PLW +P+Q +V TITS A EYA+E A  LK+  L + TD RNE INYK+REH
Sbjct: 575 IENFAGHMPLWFAPVQVVVATITSDADEYAKEAAAKLKAAGLQVVTDLRNEKINYKVREH 634

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPD 649
           S++K+P+I++CG +EA E+++ +RR GS   + ++L +AI  L +E+ PPD
Sbjct: 635 SLQKVPVILVCGKREAEEKTVNMRRLGSRDQESMTLDEAIARLCEEATPPD 685


>gi|254719143|ref|ZP_05180954.1| threonyl-tRNA synthetase [Brucella sp. 83/13]
 gi|265984137|ref|ZP_06096872.1| threonyl-tRNA synthetase [Brucella sp. 83/13]
 gi|306838428|ref|ZP_07471273.1| threonyl-tRNA synthetase [Brucella sp. NF 2653]
 gi|264662729|gb|EEZ32990.1| threonyl-tRNA synthetase [Brucella sp. 83/13]
 gi|306406568|gb|EFM62802.1| threonyl-tRNA synthetase [Brucella sp. NF 2653]
          Length = 658

 Score =  879 bits (2270), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 403/651 (61%), Positives = 517/651 (79%), Gaps = 3/651 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M + + L FPDGS++ +    TG+ +AESIS+SLAKKAVA A++G V DLSDP+   G +
Sbjct: 1   MSNTVSLQFPDGSVREYDASMTGAALAESISKSLAKKAVAYAVDGTVRDLSDPLGASGKV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT EDPR+L +IRH  AH++AEAVQ ++P  QV IGP+IE+GFYYDF + +PF+ D+L
Sbjct: 61  EIITREDPRALELIRHDTAHVLAEAVQELFPGTQVTIGPVIENGFYYDFARNEPFTLDDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM+EII R+ PF K+  S EKA+++F  K E+YKVE++++IPA +++ +Y QG+W
Sbjct: 121 PVIEKKMREIIQRNKPFTKEVWSREKAKQVFSDKGESYKVELVDAIPAGQDLKIYYQGDW 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPH+ STGQ+   FKLMKVAGAYWRGD+N PML+RIYGTA+    +L  YL+ LE
Sbjct: 181 FDLCRGPHMASTGQIGNSFKLMKVAGAYWRGDANNPMLTRIYGTAFANDNDLQAYLHMLE 240

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+EKRDHR+L REMDLFH  E+G GV+FWH KGWK+FQ L+SYMRR++    Y+E+N PQ
Sbjct: 241 EAEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDSHGYQEVNAPQ 300

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           VLD+ LW+ SGHW  YR NMF V  A D   D R FALKPMNCPGHV +F HGLKSYR+L
Sbjct: 301 VLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIFKHGLKSYRDL 360

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P++LAEFG+V+R EPSG+LHGLMRVRGFTQDDAH+FCT+EQM  ECL+I++LI+S+YKDF
Sbjct: 361 PIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQMAAECLRINDLILSVYKDF 420

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE+I +KLSTRPEKRVGSD LWD AE++M  VL+ I+  S + I TG+L GEGAFYGPK
Sbjct: 421 GFEEITIKLSTRPEKRVGSDELWDRAESVMMTVLEQIRQQSNN-IKTGILPGEGAFYGPK 479

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           FEY LKDAIGR+WQCGT QVDFNLP RF AFY+ + SEK  PVMIHRA+ GS+ERF+GI+
Sbjct: 480 FEYTLKDAIGREWQCGTTQVDFNLPERFGAFYIGADSEKKQPVMIHRAICGSMERFLGIL 539

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IENF G++PLW +P+Q +V TITS A EYA+E A  LK+  L + TD RNE INYK+REH
Sbjct: 540 IENFAGHMPLWFAPVQVVVATITSDADEYAKEAAAKLKAAGLQVVTDLRNEKINYKVREH 599

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPD 649
           S++K+P+I++CG +EA E+++ +RR GS   + ++L +AI  L +E+  PD
Sbjct: 600 SLQKVPVILVCGKREAEEKTVNMRRLGSRDQESMTLDEAIARLCEEATAPD 650


>gi|254706742|ref|ZP_05168570.1| threonyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|261314206|ref|ZP_05953403.1| threonyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|261303232|gb|EEY06729.1| threonyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
          Length = 658

 Score =  878 bits (2268), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 403/651 (61%), Positives = 517/651 (79%), Gaps = 3/651 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M + + L FPDGS++ +    TG+ +AESIS+SLAKKAVA A++G V DLSDP+   G +
Sbjct: 1   MSNTVSLQFPDGSVREYDASMTGAALAESISKSLAKKAVAYAVDGTVRDLSDPLGASGKV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT EDPR+L +IRH  AH++AEAVQ ++P  QV IGP+IE+GFYYDF + +PF+ D+L
Sbjct: 61  EIITREDPRALELIRHDTAHVLAEAVQELFPGTQVTIGPVIENGFYYDFARNEPFTLDDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM+EII R+ PF K+  S EKA+++F  K E+YKVE++++IPA +++ +Y QG+W
Sbjct: 121 PVIEKKMREIIQRNKPFTKEVWSREKAKQVFSDKGESYKVELVDAIPAGQDLKIYYQGDW 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPH+ STGQ+   FKLMKVAGAYWRGD+N PML+RIYGTA+    +L  YL+ LE
Sbjct: 181 FDLCRGPHMASTGQIGNSFKLMKVAGAYWRGDANNPMLTRIYGTAFANDNDLQAYLHMLE 240

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+EKRDHR+L REMDLFH  E+G GV+FWH KGWK+FQ L+SYMRR++    Y+E+N PQ
Sbjct: 241 EAEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDSHGYQEVNAPQ 300

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           VLD+ LW+ SGHW  YR NMF V  A D   D   FALKPMNCPGHV +F HGLKSYR+L
Sbjct: 301 VLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDCVFALKPMNCPGHVQIFKHGLKSYRDL 360

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P++LAEFG+V+R EPSG+LHGLMRVRGFTQDDAH+FCT+EQM  ECL+I++LI+S+YKDF
Sbjct: 361 PIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQMAAECLRINDLILSVYKDF 420

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE+I +KLSTRPEKRVGSD LWD AE++M  VL+ I+  S + I TG+L GEGAFYGPK
Sbjct: 421 GFEEITIKLSTRPEKRVGSDELWDRAESVMMTVLEQIRQQSNN-IKTGILPGEGAFYGPK 479

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           FEY LKDAIGR+WQCGT QVDFNLP RF AFY+ + SEK  PVMIHRA+ GS+ERF+GI+
Sbjct: 480 FEYTLKDAIGREWQCGTTQVDFNLPERFGAFYIGADSEKKQPVMIHRAICGSMERFLGIL 539

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IENF G++PLW +P+Q +V TITS A EYA+E A  LK+  L + TD RNE INYK+REH
Sbjct: 540 IENFAGHMPLWFAPVQVVVATITSDADEYAKEAAAKLKAAGLQVVTDLRNEKINYKVREH 599

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPD 649
           S++K+P+I++CG +EA E+++ +RR GS   + ++L +AI  L +E+ PPD
Sbjct: 600 SLQKVPVILVCGKREAEEKTVNMRRLGSRDQESMTLDEAIARLCEEATPPD 650


>gi|118591255|ref|ZP_01548654.1| threonyl-tRNA synthetase [Stappia aggregata IAM 12614]
 gi|118436331|gb|EAV42973.1| threonyl-tRNA synthetase [Stappia aggregata IAM 12614]
          Length = 656

 Score =  876 bits (2263), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 400/655 (61%), Positives = 511/655 (78%), Gaps = 8/655 (1%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           I+LTFPD S++ +    TG  VAE IS+SLAKKAVA+A++G++ DL+DP+     IEI+T
Sbjct: 2   IELTFPDNSVREYEPGTTGLAVAEGISKSLAKKAVAMALDGELKDLTDPISGNHQIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-------EQPFSS 116
            +DPR+L +IRH  AH+MAEAVQ +WP  QV IGP+IE+GFYYDF +       + PF+ 
Sbjct: 62  RDDPRALELIRHDAAHVMAEAVQELWPGTQVTIGPVIENGFYYDFKRVHPDTGADWPFTP 121

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
           +EL  IEKKM+EII R + F K+  S ++A+  F +K E YKVE++++IP  + + +Y+Q
Sbjct: 122 EELPVIEKKMREIIGRGAQFTKEVWSRDEAKRYFAAKGETYKVELVDAIPEDQELKIYKQ 181

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           G+W DLCRGPH+ ST Q+   FKLMKVAGAYWRGDSN  ML+RIY TAW++++EL  YL+
Sbjct: 182 GQWLDLCRGPHMVSTRQIGDAFKLMKVAGAYWRGDSNNEMLTRIYATAWHSEKELKAYLH 241

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINT 296
            LEE+EKRDHRKL REMDLFH  E+G GV+FWH KGW +FQ+LI+Y RR +KD Y+E+N 
Sbjct: 242 MLEEAEKRDHRKLGREMDLFHFQEEGPGVVFWHPKGWDMFQSLIAYKRRVLKDTYKEVNA 301

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           PQVL   LW+ SGHW  Y+ NMF+V+CAD   +D R FALKPMNCPGHV +F HGLKSYR
Sbjct: 302 PQVLHTSLWETSGHWTWYKENMFSVQCADPEAEDERVFALKPMNCPGHVQIFKHGLKSYR 361

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +LP+RLAEFG V+R EPSG+LHGLMRVRGFTQDDAHVFCT+EQM +ECLKI++LI+S+Y+
Sbjct: 362 DLPMRLAEFGMVHRYEPSGALHGLMRVRGFTQDDAHVFCTEEQMADECLKINDLILSVYE 421

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           DFGF++I+VKLSTRPEKRVG+DA WD AE IM  VL  I+  S  R+ T +L GEGAFYG
Sbjct: 422 DFGFDEIVVKLSTRPEKRVGTDAAWDHAEAIMSDVLKQIEAQSGGRVKTDILPGEGAFYG 481

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PKFEY L+DAIGR+WQCGT QVDFNLP RF AFYV+   EK  PVMIHRA+ GS+ERF+G
Sbjct: 482 PKFEYTLRDAIGREWQCGTTQVDFNLPERFGAFYVDKDGEKKTPVMIHRAICGSMERFLG 541

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           I+IENF G+ PLW +P+Q +V TITS A +Y QE+A+LLK+  L +ETDFRNE INYK+R
Sbjct: 542 ILIENFAGHFPLWFAPLQIVVATITSEADDYGQEVADLLKAKGLKVETDFRNEKINYKVR 601

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           EHS+ K+P+II+CG +EA ER++ +RR GS     + L +AI    +E+ PPD +
Sbjct: 602 EHSLAKVPVIIVCGMREAEERTVNVRRLGSKDQTPMGLDEAIAAFVEEATPPDLK 656


>gi|328543265|ref|YP_004303374.1| Threonyl-tRNA synthetase [polymorphum gilvum SL003B-26A1]
 gi|326413011|gb|ADZ70074.1| Threonyl-tRNA synthetase [Polymorphum gilvum SL003B-26A1]
          Length = 654

 Score =  875 bits (2261), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 394/649 (60%), Positives = 510/649 (78%), Gaps = 1/649 (0%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I LTFPD S++ +    TG+++AE IS+SLAKKAVA+A++G++ DL+DP+ R+  IEI+T
Sbjct: 2   IHLTFPDNSVREYAPGITGAEIAEGISKSLAKKAVAMALDGELKDLADPIARDARIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +DPR+L +IRH  AH+MAEAVQ +WP  QV IGP+IE+GFYYDF +++PF+ ++L  IE
Sbjct: 62  RDDPRALELIRHDAAHVMAEAVQELWPGTQVTIGPVIENGFYYDFKRDEPFTPEDLPVIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           KKM+EIIAR + F K+  S E+A+  F +K E YKVE++++IP  + + +Y+QG W DLC
Sbjct: 122 KKMREIIARGAAFTKEVWSREEAKRHFLTKGETYKVELVDAIPEDQELKIYKQGTWLDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ ST Q+   FKLMKVAGAYWRGDSN  ML+RIYGTAW  + EL  YL+ LEE+EK
Sbjct: 182 RGPHMTSTRQIGDAFKLMKVAGAYWRGDSNNEMLTRIYGTAWANEAELKAYLHMLEEAEK 241

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQH 303
           RDHRKL REMDLFH  E+G GV+FWH KGW +FQ+L++YMRR++  DY+E+N PQ+LD  
Sbjct: 242 RDHRKLGREMDLFHFQEEGPGVVFWHAKGWSLFQSLVAYMRRRLAADYDEVNAPQILDTS 301

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+ SGHW  Y+ NMFAV+CAD   +D R FALKPMNCPGHV +F HGLKSYR+LP+R+A
Sbjct: 302 LWETSGHWGWYKENMFAVQCADTEAEDTRLFALKPMNCPGHVQIFKHGLKSYRDLPLRMA 361

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFG V+R EPSG++HGLMRVRGFTQDDAH+FCT+EQ+  ECLKI++LI+S+Y+DFGFE+I
Sbjct: 362 EFGVVHRYEPSGAMHGLMRVRGFTQDDAHIFCTEEQLAAECLKINDLILSVYQDFGFEEI 421

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKRVGSDALWD AE +M  VL  I++ S  RI TG+L GEGAFYGPKFEY L
Sbjct: 422 VVKLSTRPEKRVGSDALWDHAEEVMTRVLKQIEDQSGGRIKTGILPGEGAFYGPKFEYTL 481

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +DAIGR+WQCGT QVDFNLP RF AFYV+   EK  PVM+HRA+ GS+ERF+GI+IENF 
Sbjct: 482 RDAIGREWQCGTTQVDFNLPERFGAFYVDKDGEKKTPVMVHRAICGSMERFLGILIENFA 541

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G+ PLWL+P Q +V TITS A +YA+E+   L    L  + D RNE INYK+REHS+ K 
Sbjct: 542 GHFPLWLAPRQVVVATITSEADDYAKEVHAALTKAGLRADLDLRNEKINYKVREHSLAKT 601

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           P+I++CG +EA ER++ +RR G      + L +AI    +E++PPD ++
Sbjct: 602 PVILVCGKREAEERTVNVRRLGKADQVAMGLEEAIAAFAEEAVPPDVKR 650


>gi|319408458|emb|CBI82113.1| Threonyl-tRNA synthetase [Bartonella schoenbuchensis R1]
          Length = 659

 Score =  874 bits (2257), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 402/654 (61%), Positives = 511/654 (78%), Gaps = 2/654 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSI 59
           M   I L+FPDGS +++P   TG ++AESIS+SLAKKAVA ++NG + DLSDP+ + G +
Sbjct: 1   MSDLIFLSFPDGSKRDYPSEMTGLELAESISKSLAKKAVAYSLNGIIRDLSDPLEQSGQV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT +DPR+L +IRH CAH++AEAVQ ++PE QV IGP+IE+GFYYDF ++QPF+ D+L
Sbjct: 61  EIITRDDPRALELIRHDCAHVLAEAVQELFPETQVTIGPVIENGFYYDFARKQPFTLDDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM+EII R+ PF K+  S EKA+++F  K E YKVEI+++IP  ++V +Y QG+W
Sbjct: 121 TIIEKKMREIIQRNKPFRKEIWSREKAKKIFSEKNELYKVEIIDAIPEDQDVKVYYQGDW 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPH++STGQ+   FKLMKVAGAYWRGD+N PML+RIYGTA+  + +L  YL+ LE
Sbjct: 181 FDLCRGPHMQSTGQIGNAFKLMKVAGAYWRGDANNPMLTRIYGTAFANENDLKAYLHTLE 240

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+EKRDHR+L REMDLFH  E+  G+IFWH KGWK+FQ LISYMRR++ D  Y+E+N PQ
Sbjct: 241 EAEKRDHRRLGREMDLFHFQEESPGMIFWHPKGWKMFQNLISYMRRRLDDHKYDEVNAPQ 300

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           VLD+ LW+ SGHW  Y+ NMF    A D   D   +ALKPMNCPGHV +F HGLKSYR+L
Sbjct: 301 VLDKSLWEISGHWGWYKENMFQTTPAADDWDDQCIYALKPMNCPGHVQIFKHGLKSYRDL 360

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFG V+R EPSGSLHGLMRVR FTQDDAH+FCT EQ+ +ECL I++LI+S Y DF
Sbjct: 361 PIRLAEFGIVHRYEPSGSLHGLMRVRSFTQDDAHIFCTDEQLADECLNINDLILSTYADF 420

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE+I +K STRPEKRVGSD LWD  E+IM  VL TI+  S+ RI T +L GEGAFYGPK
Sbjct: 421 GFEEISLKFSTRPEKRVGSDELWDHCEDIMLSVLKTIEKKSEGRIKTSILPGEGAFYGPK 480

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           FEY LKDAIGR+WQCGT QVDFNLP RF AFY++  SEK  PVMIHRA+ GS+ERF+GI+
Sbjct: 481 FEYTLKDAIGREWQCGTTQVDFNLPERFGAFYIDKDSEKRQPVMIHRAILGSMERFLGIL 540

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IENF G++PLWL+P Q +V  ITS A EYA++I   LK+  LS   D RNE INYKIREH
Sbjct: 541 IENFSGHMPLWLAPQQVVVAPITSEANEYAEKITKKLKAIGLSATADLRNEKINYKIREH 600

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           S++K+P+I++CG +E+   S+ +RR GST    +S+ + +  L+ E+ PPD ++
Sbjct: 601 SLQKVPVILVCGKRESETNSVSMRRLGSTDQTVLSIEEVMKQLSNEATPPDLRR 654


>gi|49474171|ref|YP_032213.1| threonyl-tRNA synthetase [Bartonella quintana str. Toulouse]
 gi|73919771|sp|Q6FZZ7|SYT_BARQU RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|49239675|emb|CAF26046.1| Threonyl-tRNA synthetase [Bartonella quintana str. Toulouse]
          Length = 658

 Score =  873 bits (2256), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 402/654 (61%), Positives = 513/654 (78%), Gaps = 2/654 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M   + L+FPDGS +++P   TG ++A SIS+SLAKKAVA ++NG   DLSDP+ + G I
Sbjct: 1   MSCSVSLSFPDGSKRDYPNEMTGLELAASISKSLAKKAVAYSLNGITRDLSDPLGQSGQI 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT EDPR+L +IRH CAH++AEAVQ ++PE QV IGP+IE+GFYYDF ++QPF+ ++L
Sbjct: 61  EIITREDPRALELIRHDCAHVLAEAVQELFPETQVTIGPVIENGFYYDFARQQPFTLNDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM EII R+ PF K+  S +KARE+F  K E YKVE+++SIP  +++ +Y QG+W
Sbjct: 121 TIIEKKMHEIIQRNKPFRKEIWSRKKAREIFSEKNELYKVELIDSIPDNQDLKIYYQGDW 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPH++STGQ+   FKLMKVAGAYWRGD++ PML+RIYGTA+  + +L  YL+ LE
Sbjct: 181 FDLCRGPHMQSTGQIGNAFKLMKVAGAYWRGDAHNPMLTRIYGTAFANENDLKAYLHMLE 240

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+EKRDHR+L REMDLFH  EDG G+IFWH+KGWK+FQ LISYMRR++ D  Y E+N PQ
Sbjct: 241 EAEKRDHRRLGREMDLFHFQEDGPGMIFWHQKGWKMFQNLISYMRRRLDDHQYSEVNAPQ 300

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           VLD+ LW+ SGHW  Y+ NMF    A +   D   +ALKPMNCPGHV +F H LKSYR+L
Sbjct: 301 VLDKSLWELSGHWGWYKENMFKAIPAIEDWDDKCIYALKPMNCPGHVQIFKHSLKSYRDL 360

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           PVRLAEFG V+R EPSG+LHGLMRVR FTQDDAH+FCT EQ+ +ECL I++LI+S Y DF
Sbjct: 361 PVRLAEFGVVHRYEPSGALHGLMRVRSFTQDDAHIFCTDEQLADECLNINDLILSTYADF 420

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF++I +KLSTRPEKRVGSD+LWD AENIM+ VL TI+     +I T +L GEGAFYGPK
Sbjct: 421 GFKEISLKLSTRPEKRVGSDSLWDHAENIMESVLKTIETKFAGQIKTSILPGEGAFYGPK 480

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           FEY LKDAIGR+WQCGT QVDFNLP RF+AFY++  SEK  PVMIHRA+FGS+ERF+GI+
Sbjct: 481 FEYTLKDAIGREWQCGTTQVDFNLPERFDAFYIDKDSEKRQPVMIHRAIFGSMERFLGIL 540

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IENF G++PLWL+P Q +V  ITS A EYA++I   LK+  LS ++D RNE INYKIREH
Sbjct: 541 IENFAGHMPLWLAPEQVVVAAITSEANEYAKKITARLKAVGLSAKSDLRNEKINYKIREH 600

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           S++K+P+I++CG +EA   S+ +RR GST    +S+ + I  L  E++ PD ++
Sbjct: 601 SLQKVPVILVCGKREAETNSVSMRRLGSTDQVFLSIEETIEQLKNEAMSPDLRR 654


>gi|92117217|ref|YP_576946.1| threonyl-tRNA synthetase [Nitrobacter hamburgensis X14]
 gi|91800111|gb|ABE62486.1| Ser-tRNA(Thr) hydrolase [Nitrobacter hamburgensis X14]
          Length = 681

 Score =  873 bits (2256), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 390/651 (59%), Positives = 509/651 (78%), Gaps = 2/651 (0%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
           ++ L FPDG+ + FP + TG D+A+ IS SLAK+ VA+A++G V DL+DP+ R+  IE I
Sbjct: 26  NVTLAFPDGAQRQFPKNTTGLDIAKGISPSLAKRTVAMALDGVVSDLADPIERDAKIEFI 85

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
             +DPR+L +IRH  AH++AEAVQS+WP  QV IGP+IE+GFYYDF + +PFS ++   I
Sbjct: 86  NRDDPRALELIRHDAAHVLAEAVQSLWPGTQVTIGPVIENGFYYDFFRNEPFSLEDFPAI 145

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EKKM+EIIARD PF K     EK +++F  K EA+KVE++++IP  E + +Y QG+WFDL
Sbjct: 146 EKKMREIIARDKPFTKDVWDREKTKQVFRDKGEAFKVELVDAIPGDEPIKIYYQGDWFDL 205

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ STG++   FKLMKVAGAYWRGDSN PML+RIYGTA+ +QQ+L  YL  +EE+E
Sbjct: 206 CRGPHMTSTGKIGNAFKLMKVAGAYWRGDSNNPMLTRIYGTAFASQQDLDAYLKQIEEAE 265

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQ 302
           KRDHR+L REMDLFH  E+G GV+FWH KGW +FQ +I+YMRR++ +DY+E+N PQ+LD+
Sbjct: 266 KRDHRRLGREMDLFHFQEEGPGVVFWHAKGWTLFQEIIAYMRRRLAEDYDEVNAPQMLDK 325

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW+ YR NMFA + A D  +D R FA+KPMNCPGHV +F HGLKSYRELP+RL
Sbjct: 326 SLWETSGHWEWYRENMFAAQSAGDEAEDKRWFAIKPMNCPGHVLIFKHGLKSYRELPIRL 385

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE- 421
           AEFG V+R EPSG++HGLMRVRGFTQDDAH+FCT++Q+ +ECLKI++LI+S Y+DFGFE 
Sbjct: 386 AEFGVVHRYEPSGAMHGLMRVRGFTQDDAHIFCTEQQLADECLKINDLILSTYEDFGFEG 445

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
           ++ VKLSTRP+KRVGSDA WD AE++M  VL+ IK  S +R+ T +  GEGAFYGPKFEY
Sbjct: 446 ELTVKLSTRPDKRVGSDAAWDHAESVMTAVLEQIKARSGNRVKTSINPGEGAFYGPKFEY 505

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
           +L+DAIGR+WQCGT QVDFNLP RF AFY++ HS K  PVM+HRA+ GS+ERF GI+IE+
Sbjct: 506 VLRDAIGREWQCGTTQVDFNLPERFGAFYIDEHSNKVAPVMVHRAICGSLERFAGILIEH 565

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           F G+ PLWL+P+QA+V TITS A +YA+E+    +   L IE D RNE INYK+REHS+ 
Sbjct: 566 FAGHFPLWLAPVQAVVATITSDADDYAREVVAAARRAGLRIEIDLRNEKINYKVREHSLA 625

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           K+P +++ G KEA  RS+ IRR GS     +   +AI  L +E+ PPD ++
Sbjct: 626 KVPALLVVGKKEAESRSVSIRRLGSDGQTVLPTDEAIAALVEEATPPDIKR 676


>gi|254561516|ref|YP_003068611.1| threonine tRNA synthetase [Methylobacterium extorquens DM4]
 gi|254268794|emb|CAX24755.1| threonine tRNA synthetase [Methylobacterium extorquens DM4]
          Length = 675

 Score =  873 bits (2255), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 387/647 (59%), Positives = 507/647 (78%), Gaps = 1/647 (0%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           LTFPDG+ + +    TG  V E I++SLAK+ VA+A++G VCDL D + R+ +IE I+ +
Sbjct: 4   LTFPDGNTRAYDAAVTGRTVVEGIAKSLAKRTVAMALDGTVCDLDDTIARDAAIEFISRD 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           DPR+L +IRH CAH++AEAVQ++WP  QV IGP+IE+GFYYDF K++PF+ ++  +IE K
Sbjct: 64  DPRALELIRHDCAHVLAEAVQALWPGTQVTIGPVIENGFYYDFAKDEPFTPEDFPKIEAK 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+EII+RD+PF K+    +  + LF  K E+YKVE++++IP  E++ +YRQGEWFDLCRG
Sbjct: 124 MREIISRDAPFTKEVWKRDDVKALFAEKGESYKVELVDAIPPGEDLKIYRQGEWFDLCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PH+ STG+V   FKLMKVAGAYWRGDSN PML+RIYGTAW +Q +L  YL+ LEE+E+RD
Sbjct: 184 PHMTSTGKVGAAFKLMKVAGAYWRGDSNNPMLTRIYGTAWASQADLDAYLHRLEEAERRD 243

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHLW 305
           HR+L +EMDLFH  E+G GV+FWH KGW IFQ LI+YMRR++K DY E+N PQ+LD+ LW
Sbjct: 244 HRRLGKEMDLFHFQEEGPGVVFWHAKGWTIFQELIAYMRRRLKGDYAEVNAPQILDKSLW 303

Query: 306 QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEF 365
           + SGHW  YR NMFA + A +  +D R FALKPMNCPGHV +F HGLKSYR+LP+R+AEF
Sbjct: 304 ETSGHWGWYRENMFAAQSAGEEAEDKRWFALKPMNCPGHVQIFKHGLKSYRDLPLRMAEF 363

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
           G V+R EPSG++HGLMRVRGFTQDDAH+FCT++Q+  ECLKI++LI+S Y DFGF++I+V
Sbjct: 364 GVVHRYEPSGAMHGLMRVRGFTQDDAHIFCTEDQLAAECLKINDLILSTYADFGFDQILV 423

Query: 426 KLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKD 485
           KLSTRPEKRVGSDALWD AE +M  VL  I+  S  RI T V  GEGAFYGPKFEY+L+D
Sbjct: 424 KLSTRPEKRVGSDALWDHAEAVMTQVLAQIEEQSGGRIKTAVNPGEGAFYGPKFEYVLRD 483

Query: 486 AIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           AIGRDWQCGT QVDFNLP RF+A Y+++ S+K  PVMIHRA+ GS+ERF GI+IE+F G+
Sbjct: 484 AIGRDWQCGTTQVDFNLPERFDASYIDADSQKKPPVMIHRAICGSMERFTGILIEHFAGH 543

Query: 546 LPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPI 605
            PLWL+P+Q +V TITS A  YA+E+  +L+   L +E D RNE INYK+REHS+ K+P+
Sbjct: 544 FPLWLAPVQVVVATITSDADPYAREVVRVLERAGLRVEADLRNEKINYKVREHSLAKVPV 603

Query: 606 IIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           ++  G +EA ER++ +RR GS  T  ++L  A+    +E+  PD ++
Sbjct: 604 LLALGRREAEERTVSVRRMGSQKTTTMALDAALAAFIEEATSPDRRR 650


>gi|254470004|ref|ZP_05083408.1| threonyl-tRNA synthetase [Pseudovibrio sp. JE062]
 gi|211960315|gb|EEA95511.1| threonyl-tRNA synthetase [Pseudovibrio sp. JE062]
          Length = 648

 Score =  872 bits (2254), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 395/649 (60%), Positives = 511/649 (78%), Gaps = 6/649 (0%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           ++LTFPD S++ +   +TG+DVA SIS+SL KKAVAVAI+G++ DLSDP+    +IEI+T
Sbjct: 2   LQLTFPDNSVREYDAGSTGADVAGSISKSLLKKAVAVAIDGELRDLSDPIETNAAIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +DPR+L +IRH  AH+MAEAVQ +WPE QV IGP+IE+GFYYDF ++ PF++++L +IE
Sbjct: 62  RDDPRALELIRHDAAHVMAEAVQELWPETQVTIGPVIENGFYYDFKRDTPFTTEDLPKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           KKMQ+II R++ F K+  S  +A++ F +K E YKVE++++IP  E V +Y+QGEW DLC
Sbjct: 122 KKMQQIIQRNAKFTKEIWSRNEAKDYFAAKGEDYKVELVDAIPEDETVKIYKQGEWLDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STGQ+ + FKLMKVAGAYWRGD+N  ML+RIYGTAW++ ++L  YL+ LEE+EK
Sbjct: 182 RGPHMASTGQIGQAFKLMKVAGAYWRGDANNEMLTRIYGTAWSSDKDLKAYLHMLEEAEK 241

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQH 303
           RDHRKL REMDL+H  E+G GV+FWH KGW++FQ L +YMRR+++DDY+E+N PQ+LD+ 
Sbjct: 242 RDHRKLGREMDLYHFQEEGPGVVFWHHKGWQLFQNLTNYMRRRLEDDYQEVNAPQILDKA 301

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+ SGHW+ YR NMFA +      +D R FA+KPMNCPGHV +F HGLKSYR+LP+R+A
Sbjct: 302 LWETSGHWEWYRENMFATET-----EDHRVFAIKPMNCPGHVQIFKHGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFG+V R EPSG+LHGLMRVR FTQDDAHVFCT+EQM  EC KI++LI+S+YKDFGFE+I
Sbjct: 357 EFGAVSRYEPSGALHGLMRVRAFTQDDAHVFCTEEQMAAECHKINDLIMSVYKDFGFEEI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKRVGSD +WD AE +M  VL  I+ +S  +I TG+L GEGAFYGPKFEY L
Sbjct: 417 VVKLSTRPEKRVGSDEVWDHAEAVMGEVLKEIEANSGGKIKTGILEGEGAFYGPKFEYTL 476

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +DAIGR+WQCGT QVDFNLP RF AFYV+S  EK  PVMIHRA+ GS+ERF+GI+IENF 
Sbjct: 477 RDAIGREWQCGTTQVDFNLPERFGAFYVDSDGEKKQPVMIHRAICGSLERFLGILIENFA 536

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G+ PLWL+P   +V  ITS A +YA+E+   LK   L  E D RNE INYK+REHS  KI
Sbjct: 537 GHFPLWLAPQHFVVAAITSDADDYAKEVHAALKKAGLRGELDLRNEKINYKVREHSHAKI 596

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           P+II  G +EA E+++ IRR GS     ++L +A+  L  E+  PD ++
Sbjct: 597 PVIIAVGKREAEEKTVSIRRLGSRNQTAMTLDEAVASLRDEATAPDLKE 645


>gi|163851744|ref|YP_001639787.1| threonyl-tRNA synthetase [Methylobacterium extorquens PA1]
 gi|163663349|gb|ABY30716.1| threonyl-tRNA synthetase [Methylobacterium extorquens PA1]
          Length = 675

 Score =  872 bits (2252), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/647 (59%), Positives = 507/647 (78%), Gaps = 1/647 (0%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           LTFPDG+ + +    TG  V E I++SLAK+ VA+A++G VCDL D + R+ +IE I+ +
Sbjct: 4   LTFPDGNTRAYDAAVTGRTVVEGIAKSLAKRTVAMALDGTVCDLDDTIARDAAIEFISRD 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           DPR+L +IRH CAH++AEAVQ++WP  QV IGP+IE+GFYYDF K++PF+ ++  +IE K
Sbjct: 64  DPRALELIRHDCAHVLAEAVQALWPGTQVTIGPVIENGFYYDFAKDEPFTPEDFPKIEAK 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+EII+RD+PF K+    +  + LF  + E+YKVE++++IP  E++ +YRQGEWFDLCRG
Sbjct: 124 MREIISRDAPFTKEVWKRDDVKALFAERGESYKVELVDAIPPGEDLKIYRQGEWFDLCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PH+ STG+V   FKLMKVAGAYWRGDSN PML+RIYGTAW +Q +L  YL+ LEE+E+RD
Sbjct: 184 PHMTSTGKVGAAFKLMKVAGAYWRGDSNNPMLTRIYGTAWASQADLDAYLHRLEEAERRD 243

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHLW 305
           HR+L +EMDLFH  E+G GV+FWH KGW IFQ LI+YMRR++K DY E+N PQ+LD+ LW
Sbjct: 244 HRRLGKEMDLFHFQEEGPGVVFWHAKGWTIFQELIAYMRRRLKGDYAEVNAPQILDKSLW 303

Query: 306 QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEF 365
           + SGHW  YR NMFA + A +  +D R FALKPMNCPGHV +F HGLKSYR+LP+R+AEF
Sbjct: 304 ETSGHWGWYRENMFAAQSAGEEAEDKRWFALKPMNCPGHVQIFKHGLKSYRDLPLRMAEF 363

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
           G V+R EPSG++HGLMRVRGFTQDDAH+FCT++Q+  ECLKI++LI+S Y DFGF++I+V
Sbjct: 364 GVVHRYEPSGAMHGLMRVRGFTQDDAHIFCTEDQLAAECLKINDLILSTYADFGFDQILV 423

Query: 426 KLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKD 485
           KLSTRPEKRVGSDALWD AE +M  VL  I+  S  RI T V  GEGAFYGPKFEY+L+D
Sbjct: 424 KLSTRPEKRVGSDALWDHAEAVMTQVLAQIEEQSGGRIKTAVNPGEGAFYGPKFEYVLRD 483

Query: 486 AIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           AIGRDWQCGT QVDFNLP RF+A Y+++ S+K  PVMIHRA+ GS+ERF GI+IE+F G+
Sbjct: 484 AIGRDWQCGTTQVDFNLPERFDASYIDADSQKKPPVMIHRAICGSMERFTGILIEHFAGH 543

Query: 546 LPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPI 605
            PLWL+P+Q +V TITS A  YA+E+  +L+   L +E D RNE INYK+REHS+ K+P+
Sbjct: 544 FPLWLAPVQVVVATITSDADPYAREVVRVLERAGLRVEADLRNEKINYKVREHSLAKVPV 603

Query: 606 IIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           ++  G +EA ER++ +RR GS  T  ++L  A+    +E+  PD ++
Sbjct: 604 LLALGRREAEERTVSVRRMGSQKTTTMALDAALAAFIEEATSPDRRR 650


>gi|49475537|ref|YP_033578.1| threonyl-tRNA synthetase [Bartonella henselae str. Houston-1]
 gi|73919770|sp|Q6G3K1|SYT_BARHE RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|49238343|emb|CAF27567.1| Threonyl-tRNA synthetase [Bartonella henselae str. Houston-1]
          Length = 658

 Score =  872 bits (2252), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 399/654 (61%), Positives = 514/654 (78%), Gaps = 2/654 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSI 59
           M   + L+FPDGS +++    TG ++AESIS+SLAKKA+A ++NG + DLSDP+++ G I
Sbjct: 1   MSCSVSLSFPDGSKRDYHSEMTGLELAESISKSLAKKALAYSLNGIIRDLSDPIKQSGQI 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT ED R+L +IRH CAH++AEAVQ ++P  QV IGP+IE+GFYYDF ++QPF+ D+L
Sbjct: 61  EIITREDTRALELIRHDCAHVLAEAVQELFPGTQVTIGPVIENGFYYDFARQQPFTLDDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM+EII R+ PF K+  S +KARE+F  K E YKVE+++SIP  +++ +Y QG+W
Sbjct: 121 TIIEKKMREIIQRNKPFRKEVWSRKKAREIFSEKGELYKVELIDSIPDNQDLKVYYQGDW 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPH++STGQ+   FKLMKVAGAYWRGD+N PML+RIYGTA+  + +L  YL+ LE
Sbjct: 181 FDLCRGPHMQSTGQIGNAFKLMKVAGAYWRGDANNPMLTRIYGTAFANENDLKAYLHMLE 240

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+EKRDHR+L REM+LFH  E+G G+IFWH+KGWK+FQ LI+YMRR++ D  Y E+N PQ
Sbjct: 241 EAEKRDHRRLGREMNLFHFQEEGPGMIFWHKKGWKMFQNLINYMRRRLDDHQYAEVNAPQ 300

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           VLD+ LW+ SGHW+ Y+ NMF    A +   +   +ALKPMNCPGHV +F HGLKSYR+L
Sbjct: 301 VLDRSLWEISGHWEWYKENMFKAIPAAEDWDNENVYALKPMNCPGHVQIFKHGLKSYRDL 360

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P R+AEFG V+R EPSGSLHGLMRVR FTQDDAH+FCT EQ+ +ECL I++LI+S Y DF
Sbjct: 361 PTRIAEFGVVHRYEPSGSLHGLMRVRCFTQDDAHIFCTDEQLADECLNINDLILSTYADF 420

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF++I +KLSTRPEKRVGSDALWD AENIM+ VL TI+  S  +I T +L GEGAFYGPK
Sbjct: 421 GFKEISLKLSTRPEKRVGSDALWDHAENIMESVLKTIETKSAGQIKTSILPGEGAFYGPK 480

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           FEY LKDAIGR+WQCGT Q+DFNLP RFNAFY++  SEK  PVMIHRA+FGS+ERF+GI+
Sbjct: 481 FEYTLKDAIGREWQCGTTQLDFNLPERFNAFYIDKDSEKRQPVMIHRAIFGSMERFLGIL 540

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IENF G++PLW +P Q +V TITS A EYA+++   LKS  LS   D RNE INYKIREH
Sbjct: 541 IENFSGHMPLWFAPEQIVVATITSEANEYAKKLTAKLKSVGLSTTLDLRNEKINYKIREH 600

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           S++K+P+I++CG +E+   S+ +RR GST    +S+ + I  L  E+ PPD ++
Sbjct: 601 SLQKVPVILVCGKRESETNSVNMRRLGSTEQIFLSVEEVIEQLKNEATPPDLRR 654


>gi|209884754|ref|YP_002288611.1| threonyl-tRNA synthetase [Oligotropha carboxidovorans OM5]
 gi|209872950|gb|ACI92746.1| threonyl-tRNA synthetase [Oligotropha carboxidovorans OM5]
          Length = 680

 Score =  871 bits (2251), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/652 (58%), Positives = 515/652 (78%), Gaps = 2/652 (0%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
           + + +TFPDG+ + FP   +G ++A  IS SLAK+ VA+A++G V DL+DP+ ++ ++E+
Sbjct: 24  AKVTITFPDGAKREFPKGISGFEIARGISPSLAKRTVAMALDGVVSDLADPIEQDATLEL 83

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           I  +DPR+L +IRH CAH++AEAVQ++WP  QV IGP+IE+GFYYDF + +PF+ ++ A 
Sbjct: 84  INRDDPRALELIRHDCAHVLAEAVQTLWPGTQVTIGPVIENGFYYDFFRNEPFTPEDFAA 143

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEKKM+EIIARD+PF K+  + +  +++F  K EA+KVE++++IPA +++ +Y+QGEWFD
Sbjct: 144 IEKKMREIIARDAPFTKEVWTRDDTKKVFADKGEAFKVELVDAIPADQSIKIYKQGEWFD 203

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ STG++   FKLMKVAGAYWRGDSN PML+RIYGTA+  QQ L  YL  LEE+
Sbjct: 204 LCRGPHMTSTGKIGNAFKLMKVAGAYWRGDSNNPMLTRIYGTAFANQQALDAYLKQLEEA 263

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLD 301
           EKRDHR+L REMDLFH  E+G GV+FWH KGW +FQ +I+YMRR++  DY+E+N PQ+LD
Sbjct: 264 EKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWTVFQEIIAYMRRRLAADYDEVNAPQMLD 323

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW+ YR NMFA + A D  +D R FA+KPMNCPGHV +F HGLKSYRELP+R
Sbjct: 324 KSLWETSGHWEWYRENMFAAQSAGDEAEDKRWFAIKPMNCPGHVLIFKHGLKSYRELPIR 383

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFG V+R EPSG++HGLMRVRGFTQDDAH+FCT++Q+  ECLKI++LI+S Y DFGFE
Sbjct: 384 LAEFGVVHRYEPSGAMHGLMRVRGFTQDDAHIFCTEQQLAEECLKINDLILSTYADFGFE 443

Query: 422 -KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
            ++ VKLSTRP+KRVGSDA WD AE++M  VL+ IK  S +RI T +  GEGAFYGPKFE
Sbjct: 444 GELTVKLSTRPDKRVGSDAAWDHAESVMTTVLEQIKAKSGNRITTSINPGEGAFYGPKFE 503

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           Y+L+DAIGR+WQCGT QVDFNLP RF AFY++ HS K  PVM+HRA+ GS+ERF GI+IE
Sbjct: 504 YVLRDAIGREWQCGTTQVDFNLPERFGAFYIDEHSNKVAPVMVHRAICGSLERFAGILIE 563

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           ++ G+ PLWL+P+QA++TTITS   +YA+E+    ++  L ++ D RNE INYK+REHS+
Sbjct: 564 HYAGHFPLWLAPVQAVITTITSDGDDYAREVFEACRAAGLRVDIDLRNEKINYKVREHSL 623

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
            K+P +++ G KEA  R++ IRR G   +  V L +A+  LT E++PPD ++
Sbjct: 624 AKVPALLVVGKKEAETRAVSIRRLGKEGSSVVPLDEALKALTTEAIPPDVKR 675


>gi|170748342|ref|YP_001754602.1| threonyl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831]
 gi|170654864|gb|ACB23919.1| threonyl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831]
          Length = 675

 Score =  871 bits (2251), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/647 (59%), Positives = 501/647 (77%), Gaps = 1/647 (0%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           LTFPDG+ +      TG  V E I++SLAK+ VA+A++G V DL DP+ R+  IE +   
Sbjct: 4   LTFPDGNTREIAAGTTGRAVVEGIAKSLAKRTVAMALDGTVADLDDPIDRDARIEFLDRT 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           DPRSL +IRH CAH++AEAVQ++WPE QV IGP+IE+GFYYDF +E PF+ ++  +IE K
Sbjct: 64  DPRSLELIRHDCAHVLAEAVQALWPETQVTIGPVIENGFYYDFHRETPFTPEDFPKIEAK 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+EIIARD+PF K+  + +  R LF  K E +KVE++++IP  E++ +YRQG+WFDLCRG
Sbjct: 124 MREIIARDAPFTKEVWTRDDVRGLFAGKGEGFKVELVDAIPPGEDLKIYRQGDWFDLCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PH+ STG+V   FKLMKVAGAYWRGDSN PML+RIYGTAW  Q +L  YL+ LEE+E+RD
Sbjct: 184 PHMTSTGKVGTAFKLMKVAGAYWRGDSNNPMLTRIYGTAWANQADLDDYLHRLEEAERRD 243

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHLW 305
           HR+L REMDLFH  E+G GV+FWH KGW IFQ LI+YMRR+++ DY E+N PQ+LD+ LW
Sbjct: 244 HRRLGREMDLFHFQEEGPGVVFWHAKGWTIFQELIAYMRRRLRGDYAEVNAPQILDKALW 303

Query: 306 QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEF 365
           + SGHW  YR NMFA + A +  +D R FALKPMNCPGHV +F HGLKSYR+LP+R+AEF
Sbjct: 304 ETSGHWGWYRENMFAAQSAGEEAEDKRWFALKPMNCPGHVQIFKHGLKSYRDLPLRMAEF 363

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
           G V+R EPSG++HGLMRVRGFTQDDAHVFCT++Q+ +ECLKI++LI+S Y DFGF++I+V
Sbjct: 364 GIVHRYEPSGAMHGLMRVRGFTQDDAHVFCTEDQLADECLKINDLILSTYADFGFDQIVV 423

Query: 426 KLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKD 485
           KLSTRPEKRVGSDALWD AE++M  VL  I+  S  RI T V  GEGAFYGPKFEY+L+D
Sbjct: 424 KLSTRPEKRVGSDALWDHAEDVMTRVLAQIEEQSGGRIRTAVNPGEGAFYGPKFEYVLRD 483

Query: 486 AIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           AIGRDWQCGT QVDFNLP RF AFY+++   +  PVM+HRA+ GS+ERF GI+IE+F G+
Sbjct: 484 AIGRDWQCGTTQVDFNLPERFGAFYIDADGARKPPVMVHRAICGSMERFTGILIEHFAGH 543

Query: 546 LPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPI 605
            PLWL+P+Q +V TIT  A  YA+++   L+   L +E D RNE INYK+REHS+ K+P+
Sbjct: 544 FPLWLAPVQVVVATITGEADAYARDVIRTLERAGLRVEADLRNEKINYKVREHSLAKVPV 603

Query: 606 IIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           ++  G +EA ER++ IRR GS  T+ + L +A+    +E+  PD ++
Sbjct: 604 LLALGRREAEERTVSIRRLGSQQTRTLPLTEAVAAFVEEATAPDIRR 650


>gi|188581528|ref|YP_001924973.1| threonyl-tRNA synthetase [Methylobacterium populi BJ001]
 gi|179345026|gb|ACB80438.1| threonyl-tRNA synthetase [Methylobacterium populi BJ001]
          Length = 675

 Score =  871 bits (2250), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 387/647 (59%), Positives = 507/647 (78%), Gaps = 1/647 (0%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           LTFPDG+ + F    TG  V E I++SLAK+ VA+A++G V DL D + R+ +IE I+ +
Sbjct: 4   LTFPDGNTRAFEAAVTGRTVVEGIAKSLAKRTVAMALDGTVRDLDDTIERDAAIEFISRD 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           DPR+L +IRH CAH++AEAVQ++WP  QV IGP+IE+GFYYDF K++PF+ ++  +IE K
Sbjct: 64  DPRALELIRHDCAHVLAEAVQALWPGTQVTIGPVIENGFYYDFAKDEPFTPEDFPKIEAK 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+EII+RD+PF K+  + +  + LF  K E YKVE++++IPA E++ +YRQGEWFDLCRG
Sbjct: 124 MREIISRDAPFTKEVWTRDDVKALFAEKGERYKVELVDAIPAGEDLKIYRQGEWFDLCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PH+ STG+V   FKLMKVAGAYWRGD+N PML+RIYGTAW +Q +L  YL+ LEE+E+RD
Sbjct: 184 PHMTSTGKVGTAFKLMKVAGAYWRGDANNPMLTRIYGTAWASQADLDAYLHRLEEAERRD 243

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHLW 305
           HR+L +EMDLFH  E+G GV+FWH KGW IFQ LI+YMRR++K DY E+N PQ+LD+ LW
Sbjct: 244 HRRLGKEMDLFHFQEEGPGVVFWHAKGWTIFQELIAYMRRRLKGDYAEVNAPQILDKSLW 303

Query: 306 QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEF 365
           + SGHW  YR NMFA + A +  +D R FALKPMNCPGHV +F HGLKSYR+LP+R+AEF
Sbjct: 304 ETSGHWGWYRENMFAAQSAGEEAEDKRWFALKPMNCPGHVQIFKHGLKSYRDLPLRMAEF 363

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
           G V+R EPSG++HGLMRVRGFTQDDAH+FCT++Q+  ECLKI++LI+S Y DFGF++I+V
Sbjct: 364 GVVHRYEPSGAMHGLMRVRGFTQDDAHIFCTEDQLAAECLKINDLILSTYADFGFDQILV 423

Query: 426 KLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKD 485
           KLSTRPEKRVGSDALWD AE +M  VL  I+  S  RI T V  GEGAFYGPKFEY+L+D
Sbjct: 424 KLSTRPEKRVGSDALWDHAEAVMTRVLAQIEEQSGGRIKTAVNPGEGAFYGPKFEYVLRD 483

Query: 486 AIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           AIGRDWQCGT QVDFNLP RF+A Y+++ S+K  PVMIHRA+ GS+ERF GI+IE+F G+
Sbjct: 484 AIGRDWQCGTTQVDFNLPERFDASYIDADSQKKPPVMIHRAICGSMERFTGILIEHFAGH 543

Query: 546 LPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPI 605
            PLWL+P+Q +V TITS A  YA+E+  +L+   L +E D RNE INYK+REHS+ K+P+
Sbjct: 544 FPLWLAPVQVVVATITSDADPYAREVVRVLERAGLRVEADLRNEKINYKVREHSLAKVPV 603

Query: 606 IIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           ++  G +EA ER++ +RR GS  T  ++L  A+    +E+  PD ++
Sbjct: 604 LLALGRREAEERTVSVRRLGSQKTTTLTLDAAVAAFIEEATSPDRRR 650


>gi|218530550|ref|YP_002421366.1| threonyl-tRNA synthetase [Methylobacterium chloromethanicum CM4]
 gi|218522853|gb|ACK83438.1| threonyl-tRNA synthetase [Methylobacterium chloromethanicum CM4]
          Length = 675

 Score =  870 bits (2249), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/647 (59%), Positives = 506/647 (78%), Gaps = 1/647 (0%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           LTFPDG+ + +    TG  V E I++SLAK+ VA+A++G VCDL D + R+ +IE I+ +
Sbjct: 4   LTFPDGNTRAYDAAVTGRTVVEGIAKSLAKRTVAMALDGTVCDLDDTIARDAAIEFISRD 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           DPR+L +IRH CAH++AEAVQ++WP  QV IGP+IE+GFYYDF K++PF+ ++  +IE K
Sbjct: 64  DPRALELIRHDCAHVLAEAVQALWPGTQVTIGPVIENGFYYDFAKDEPFTPEDFPKIEAK 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+EII+RD+PF K+    +  + LF  K E+YKVE++++IP  E++ +YRQGEWFDLCRG
Sbjct: 124 MREIISRDAPFTKEVWKRDDVKALFAEKGESYKVELVDAIPPGEDLKIYRQGEWFDLCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PH+ STG+V   FKLMKVAGAYWRGDSN PML+RIYGTAW +Q +L  YL+ LEE+E+RD
Sbjct: 184 PHMTSTGKVGAAFKLMKVAGAYWRGDSNNPMLTRIYGTAWASQADLDAYLHRLEEAERRD 243

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHLW 305
           HR+L +EMDLFH  E+G GV+FWH KGW IFQ LI+YMRR++K DY E+N PQ+LD+ LW
Sbjct: 244 HRRLGKEMDLFHFQEEGPGVVFWHAKGWTIFQELIAYMRRRLKGDYAEVNAPQILDKSLW 303

Query: 306 QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEF 365
           + SGHW  YR NMFA + A +  +D R FALKPMNCPGHV +F HGLKSYR+LP+R+AEF
Sbjct: 304 ETSGHWGWYRENMFAAQSAGEEAEDKRWFALKPMNCPGHVQIFKHGLKSYRDLPLRMAEF 363

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
           G V+R EPSG++HGLMRVRGFTQDDAH+FCT++Q+  ECLKI++LI+S Y DFGF++I+V
Sbjct: 364 GVVHRYEPSGAMHGLMRVRGFTQDDAHIFCTEDQLAAECLKINDLILSTYADFGFDQILV 423

Query: 426 KLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKD 485
           KLS RPEKRVGSDALWD AE +M  VL  I+  S  RI T V  GEGAFYGPKFEY+L+D
Sbjct: 424 KLSMRPEKRVGSDALWDHAEAVMTQVLAQIEEQSGGRIKTAVNPGEGAFYGPKFEYVLRD 483

Query: 486 AIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           AIGRDWQCGT QVDFNLP RF+A Y+++ S+K  PVMIHRA+ GS+ERF GI+IE+F G+
Sbjct: 484 AIGRDWQCGTTQVDFNLPERFDASYIDADSQKKPPVMIHRAICGSMERFTGILIEHFAGH 543

Query: 546 LPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPI 605
            PLWL+P+Q +V TITS A  YA+E+  +L+   L +E D RNE INYK+REHS+ K+P+
Sbjct: 544 FPLWLAPVQVVVATITSDADPYAREVVRVLERAGLRVEADLRNEKINYKVREHSLAKVPV 603

Query: 606 IIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           ++  G +EA ER++ +RR GS  T  ++L  A+    +E+  PD ++
Sbjct: 604 LLALGRREAEERTVSVRRMGSQKTTTMALDAALAAFIEEATSPDRRR 650


>gi|240138908|ref|YP_002963383.1| threonine tRNA synthetase [Methylobacterium extorquens AM1]
 gi|240008880|gb|ACS40106.1| threonine tRNA synthetase [Methylobacterium extorquens AM1]
          Length = 675

 Score =  868 bits (2244), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/647 (59%), Positives = 505/647 (78%), Gaps = 1/647 (0%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           LTFPDG+ + +    TG  V E I++SLAK+ VA+A++G VCDL D + R+ +IE I  +
Sbjct: 4   LTFPDGNTRAYDAAVTGRTVVEGIAKSLAKRTVAMALDGTVCDLDDTIARDAAIEFIFRD 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D R+L +IRH CAH++AEAVQ++WP  QV IGP+IE+GFYYDF K++PF+ ++  +IE K
Sbjct: 64  DARALELIRHDCAHVLAEAVQALWPGTQVTIGPVIENGFYYDFAKDEPFTPEDFPKIEAK 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+EII+RD+PF K+    +  + LF  K E+YKVE++++IP  E++ +YRQGEWFDLCRG
Sbjct: 124 MREIISRDAPFTKEVWKRDDVKALFAEKGESYKVELVDAIPPGEDLKIYRQGEWFDLCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PH+ STG+V   FKLMKVAGAYWRGDSN PML+RIYGTAW +Q +L  YL+ LEE+E+RD
Sbjct: 184 PHMTSTGKVGAAFKLMKVAGAYWRGDSNNPMLTRIYGTAWASQADLDAYLHRLEEAERRD 243

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHLW 305
           HR+L +EMDLFH  E+G GV+FWH KGW IFQ LI+YMRR++K DY E+N PQ+LD+ LW
Sbjct: 244 HRRLGKEMDLFHFQEEGPGVVFWHAKGWTIFQELIAYMRRRLKGDYAEVNAPQILDKSLW 303

Query: 306 QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEF 365
           + SGHW  YR NMFA + A +  +D R FALKPMNCPGHV +F HGLKSYR+LP+R+AEF
Sbjct: 304 ETSGHWGWYRENMFAAQSAGEEAEDKRWFALKPMNCPGHVQIFKHGLKSYRDLPLRMAEF 363

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
           G V+R EPSG++HGLMRVRGFTQDDAH+FCT++Q+  ECLKI++LI+S Y DFGF++I+V
Sbjct: 364 GVVHRYEPSGAMHGLMRVRGFTQDDAHIFCTEDQLAAECLKINDLILSTYADFGFDQILV 423

Query: 426 KLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKD 485
           KLSTRPEKRVGSDALWD AE +M  VL  I+  S  RI T V  GEGAFYGPKFEY+L+D
Sbjct: 424 KLSTRPEKRVGSDALWDHAEAVMTQVLAQIEEQSGGRIKTAVNPGEGAFYGPKFEYVLRD 483

Query: 486 AIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           AIGRDWQCGT QVDFNLP RF+A Y+++ S+K  PVMIHRA+ GS+ERF GI+IE+F G+
Sbjct: 484 AIGRDWQCGTTQVDFNLPERFDASYIDADSQKKPPVMIHRAICGSMERFTGILIEHFAGH 543

Query: 546 LPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPI 605
            PLWL+P+Q +V TITS A  YA+E+  +L+   L +E D RNE INYK+REHS+ K+P+
Sbjct: 544 FPLWLAPVQVVVATITSDADPYAREVVRVLERAGLRVEADLRNEKINYKVREHSLAKVPV 603

Query: 606 IIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           ++  G +EA ER++ +RR GS  T  ++L  A+    +E+  PD ++
Sbjct: 604 LLALGRREAEERTVSVRRMGSQKTTTMTLDAALAAFIEEATSPDRRR 650


>gi|319898981|ref|YP_004159074.1| Threonyl-tRNA synthetase [Bartonella clarridgeiae 73]
 gi|319402945|emb|CBI76496.1| Threonyl-tRNA synthetase [Bartonella clarridgeiae 73]
          Length = 658

 Score =  865 bits (2234), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 398/654 (60%), Positives = 508/654 (77%), Gaps = 2/654 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M   I L+FPDGS +++P   TG ++A+SIS  LAKKAVA +++G + DLSDP+ + G +
Sbjct: 1   MSCSISLSFPDGSKRDYPTEITGLELAKSISNFLAKKAVAYSLDGVLRDLSDPLGQSGQV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT +DPR+L +IRH CAH++AEAVQ ++PE QV IGP+IE+GFYYDF ++QPF+ D+L
Sbjct: 61  EIITRDDPRALELIRHDCAHVLAEAVQELFPETQVTIGPVIENGFYYDFARKQPFTLDDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM+EII R+ PF K+  S EKA+++F  K E YK+E++++IP  +++ +Y QG+W
Sbjct: 121 TIIEKKMREIIQRNKPFRKEIWSREKAKKIFSEKNELYKIELIDAIPDDQDLKVYYQGDW 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPH++STGQ+   FKLMKVAGAYWRGD+N PML+RIYGTA+  + +L  YL+ LE
Sbjct: 181 FDLCRGPHMQSTGQIGNAFKLMKVAGAYWRGDANNPMLTRIYGTAFTNENDLKVYLHMLE 240

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+EKRDHR+L REMDLFH  E+G G+IFWH KGWK+FQ LISYMRR++ D  Y E+  PQ
Sbjct: 241 ETEKRDHRRLGREMDLFHFQEEGPGMIFWHPKGWKMFQNLISYMRRRLDDHKYAEVQAPQ 300

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           VLD+ LW+ SGHW  Y+ NMF    A D   +   +ALKPMNCPGHV +F HGLKSYR+L
Sbjct: 301 VLDKSLWEVSGHWRWYKENMFKTIPAADDWNNEYIYALKPMNCPGHVQIFKHGLKSYRDL 360

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFG V+R EPSGSLHGLMR R FTQDDAH+FCT+EQ+ +ECL I++LI+S Y DF
Sbjct: 361 PIRLAEFGLVHRYEPSGSLHGLMRARSFTQDDAHIFCTEEQLADECLSINDLILSTYADF 420

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE+I +KLSTRPEKRVGSD LWD AENIM  VL TI+  S  R+   +L GEGAFYGPK
Sbjct: 421 GFEEISLKLSTRPEKRVGSDELWDHAENIMTSVLKTIEKKSSGRVRISILPGEGAFYGPK 480

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           FEY LKDAIGR+WQCGT QVDFNLP RF AFY++  SEK  PVMIHRA+FGS+ERF+GI+
Sbjct: 481 FEYTLKDAIGREWQCGTTQVDFNLPERFGAFYIDKDSEKRQPVMIHRAIFGSMERFLGIL 540

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IENF G++P WL+P Q  V TITS A +YA++I   LK+  LS+  D RNE INYKIREH
Sbjct: 541 IENFSGHMPFWLAPQQIAVATITSDANDYAKKITAKLKAIGLSVILDSRNEKINYKIREH 600

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           S++KIP+I++CG +EA   S+ +RR GS     +SL + I  L  E++PPD ++
Sbjct: 601 SLQKIPVILVCGKREAETNSVNMRRLGSVEQSLLSLEEVIKQLLDEAIPPDLRR 654


>gi|319407312|emb|CBI80953.1| Threonyl-tRNA synthetase [Bartonella sp. 1-1C]
          Length = 654

 Score =  863 bits (2230), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 399/653 (61%), Positives = 504/653 (77%), Gaps = 2/653 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSI 59
           M   I L+FPDGS +++    TG ++AESIS+SL KKAVA ++NG + DLSDP+ + G +
Sbjct: 1   MSRSISLSFPDGSKRDYQTETTGLELAESISKSLTKKAVAYSLNGVIRDLSDPLEQSGQV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT +DPR+L +IRH CAH++AEAVQ ++PE QV IGP+IE+GFYYDF ++QPF+ D+L
Sbjct: 61  EIITRDDPRALELIRHDCAHVLAEAVQELFPETQVTIGPVIENGFYYDFARKQPFTLDDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM+EII R+ PF K+  S EKA+++F  K E YKVE+++SIP  +++ +Y QG+W
Sbjct: 121 TTIEKKMREIIQRNQPFRKEIWSREKAKKIFSEKNELYKVELIDSIPDDQDLKVYYQGDW 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPH++STGQ+   FKLMKVAGAYWRGD+N PML+RIYGTA+  + +L  YL+ LE
Sbjct: 181 FDLCRGPHMQSTGQIGNAFKLMKVAGAYWRGDANNPMLTRIYGTAFTNENDLKAYLHMLE 240

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+EKRDHR+L REMDLFH  E+  G+IFWH KGWK+FQ LISYMRR++ +  Y E+  PQ
Sbjct: 241 EAEKRDHRRLGREMDLFHFQEESPGMIFWHPKGWKMFQNLISYMRRRLDNHKYAEVQAPQ 300

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           VLD+ LW+ SGHW  Y+ NMF    A D   D  T+ALKPMNCPGHV +F HGLKSYR+L
Sbjct: 301 VLDKSLWEISGHWGWYKENMFKTIPAADDWNDECTYALKPMNCPGHVQIFKHGLKSYRDL 360

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           PVRLAEFG V+R EPSGSLHGLMRVR FTQDDAH+FCT+EQ+ +ECL I++LI+S Y DF
Sbjct: 361 PVRLAEFGLVHRYEPSGSLHGLMRVRSFTQDDAHIFCTEEQLADECLSINDLILSTYADF 420

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF++I +KLSTRPEKRVGSD LWD AENIM  VL TI+  S   +   +L GEGAFYGPK
Sbjct: 421 GFKEISLKLSTRPEKRVGSDELWDHAENIMTSVLKTIEEKSSGCVKISILPGEGAFYGPK 480

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           FEYIL DAIGR+WQCGT QVDFNLP RF AFY++  SEK  PVMIHRA+FGS+ERF+GI+
Sbjct: 481 FEYILTDAIGREWQCGTTQVDFNLPERFGAFYIDKDSEKRQPVMIHRAIFGSMERFLGIL 540

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IENF G++P WL+P Q +V TITS A EYA++I   LK+  LS + D RNE INYKIREH
Sbjct: 541 IENFAGHIPFWLAPQQIVVATITSDANEYAKKITEKLKALGLSAKLDSRNEKINYKIREH 600

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           S++KIP+I++CG +EA   S+ +RR GS     + +      L  E+ PPD +
Sbjct: 601 SLQKIPVILVCGKQEAQTNSVNVRRLGSVEQTFLPIEKVFAQLLDEATPPDLR 653


>gi|85716379|ref|ZP_01047351.1| threonyl-tRNA synthetase [Nitrobacter sp. Nb-311A]
 gi|85696736|gb|EAQ34622.1| threonyl-tRNA synthetase [Nitrobacter sp. Nb-311A]
          Length = 679

 Score =  862 bits (2227), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 393/654 (60%), Positives = 508/654 (77%), Gaps = 4/654 (0%)

Query: 2   PSD-IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           P+D I LTFPDG+ + FP   TG+++A+ IS SLAK+ VA+A++G V DL+DP+ R+  I
Sbjct: 23  PADNITLTFPDGAQREFPKSTTGAEIAKGISPSLAKRTVAMALDGVVSDLADPIERDAGI 82

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           E I+ +DPR+L +IRH  AH++AEAVQ++WP  QV IGP+IE+GFYYDF + +PFS ++ 
Sbjct: 83  EFISRDDPRALELIRHDAAHVLAEAVQTLWPGTQVTIGPVIENGFYYDFFRNEPFSVEDF 142

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A IEKKM+EIIARD PF K     EK +++F  K E +KVE++++IP  E + +Y QG+W
Sbjct: 143 AAIEKKMREIIARDKPFTKDVWDREKTKQVFRDKGETFKVELVDAIPGNEPIKIYYQGDW 202

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPH+ STG++   FKLMKVAGAYWRGDSN PML+RIYGTA+  Q +L  YL  +E
Sbjct: 203 FDLCRGPHMTSTGKIGNAFKLMKVAGAYWRGDSNNPMLTRIYGTAFANQADLDAYLKQIE 262

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQV 299
           E+EKRDHRKL RE+DLFH  E+G GV+FWH KGW IFQ +I+YMRR++ +DY+E+N PQ+
Sbjct: 263 EAEKRDHRKLGRELDLFHFQEEGPGVVFWHAKGWTIFQAVIAYMRRRLAEDYDEVNAPQM 322

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           LD+ LW+ SGHW+ YR NMFA + A D  +D R F +KPMNCPGHV +F HGLKSYR+LP
Sbjct: 323 LDKALWETSGHWEWYRENMFAAQSAGDEAEDKRWFTIKPMNCPGHVQLFKHGLKSYRDLP 382

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +RLAEFG V+R EPSG++HGLMRVRGFTQDDAHVFCT+EQ+ +ECLKI+ LI+S Y DFG
Sbjct: 383 LRLAEFGVVHRYEPSGAMHGLMRVRGFTQDDAHVFCTEEQLADECLKINELILSTYADFG 442

Query: 420 FE-KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           F+ ++ VKLSTRPEKRVGSDA WD AE +M  VL  I  +S +RI T +  GEGAFYGPK
Sbjct: 443 FDGELTVKLSTRPEKRVGSDAAWDHAEAVMADVLKRIA-ASNNRIKTEINPGEGAFYGPK 501

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           FEY+L+DAIGRDWQCGT QVDFNLP RF AFY+++   K  PVM+HRA+ GSIERFIGI+
Sbjct: 502 FEYVLRDAIGRDWQCGTTQVDFNLPERFGAFYIDADGGKKAPVMVHRAICGSIERFIGIL 561

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+F G+ PLWL+P+QA+VTTITS   EYA+ +A+  +   L +E D RNE INYK+REH
Sbjct: 562 IEHFAGHFPLWLAPVQAVVTTITSDGDEYAKAVASAARRAGLRVELDLRNEKINYKVREH 621

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           S+ KIP +++ G KEA   S+ IRR GS   + +   +AI  L +E++PPD ++
Sbjct: 622 SLAKIPALLVVGKKEAETESVSIRRLGSDGQKVMPTGEAIAALVEEAIPPDIRR 675


>gi|319404307|emb|CBI77900.1| Threonyl-tRNA synthetase [Bartonella rochalimae ATCC BAA-1498]
          Length = 654

 Score =  862 bits (2226), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 397/653 (60%), Positives = 504/653 (77%), Gaps = 2/653 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSI 59
           M   I L+FPDGS +++    TG ++AESIS+SLAKKAVA ++NG + DLSDP+ + G +
Sbjct: 1   MSRSISLSFPDGSKRDYQTETTGLELAESISKSLAKKAVAYSLNGVIRDLSDPLEQSGQV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT +DPR+L +IRH CAH++AEAVQ ++PE QV IGP+IE+GFYYDF ++QPF+ D+L
Sbjct: 61  EIITRDDPRALELIRHDCAHVLAEAVQELFPETQVTIGPVIENGFYYDFARKQPFTLDDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM+EII R+ PF K+  S EKA+++F  K E YKVE++++IP  +++ +Y QG+W
Sbjct: 121 TTIEKKMREIIQRNKPFRKEIWSREKAKKIFSEKNELYKVELIDAIPDDQDLKVYYQGDW 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPH++STGQ+   FKLMKVAGAYWRGD+N PML+RIYGTA+  + +L  YL+ LE
Sbjct: 181 FDLCRGPHMQSTGQIGNAFKLMKVAGAYWRGDANNPMLTRIYGTAFTNENDLKAYLHMLE 240

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+EKRDHR+L REMDLFH  E+  G+IFWH KGWK+FQ LISYMRR++ +  Y E+  PQ
Sbjct: 241 EAEKRDHRRLGREMDLFHFQEESPGMIFWHPKGWKMFQNLISYMRRRLDNHKYAEVQAPQ 300

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           VLD+ LW+ SGHW  Y+ NMF    A D   D  T+ALKPMNCPGHV +F HGLKSYR+L
Sbjct: 301 VLDKSLWEISGHWGWYKENMFKTIPAADDWNDEYTYALKPMNCPGHVQIFKHGLKSYRDL 360

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           PVRLAEFG V+R EPSGSLHGLMRVR FTQDDAH+FCT+EQ+ +ECL I++LI+S Y DF
Sbjct: 361 PVRLAEFGLVHRYEPSGSLHGLMRVRSFTQDDAHIFCTEEQLADECLSINDLILSTYADF 420

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF++I +KLSTRPEKRVGSD LWD AENIM  VL TI+  S   +   +L GEGAFYGPK
Sbjct: 421 GFKEISLKLSTRPEKRVGSDELWDHAENIMTSVLKTIEEKSSGCVKISILPGEGAFYGPK 480

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           FEY L DAIGR+WQCGT QVDFNLP RF AFY++  SEK  PVMIHRA+FGS+ERF+GI+
Sbjct: 481 FEYTLTDAIGREWQCGTTQVDFNLPERFGAFYIDKDSEKRQPVMIHRAIFGSMERFLGIL 540

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IENF G++P WL+P Q +V TITS A EYA++I   LK+  LS + D RNE INYKIREH
Sbjct: 541 IENFAGHIPFWLAPQQIVVATITSDANEYAKKITEKLKALGLSAKLDSRNEKINYKIREH 600

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           S++K+P+I++CG +EA   S+ +RR GS     + +      L  E+ PPD +
Sbjct: 601 SLQKVPVILVCGKQEAQTNSVNMRRLGSIEQTFLPIEKVFAQLLDEATPPDLR 653


>gi|75676225|ref|YP_318646.1| threonyl-tRNA synthetase [Nitrobacter winogradskyi Nb-255]
 gi|74421095|gb|ABA05294.1| Ser-tRNA(Thr) hydrolase [Nitrobacter winogradskyi Nb-255]
          Length = 686

 Score =  861 bits (2224), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 393/654 (60%), Positives = 508/654 (77%), Gaps = 4/654 (0%)

Query: 2   PSD-IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           P+D + LTFPDG+ + FP + TG ++A+ IS SLAK+ VA+A++G V DL+DP+ ++ +I
Sbjct: 22  PADNVVLTFPDGATREFPKNTTGLEIAKGISPSLAKRTVAMALDGIVNDLADPIEQDATI 81

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           E I+ +DPR+L +IRH  AH++AEAVQ++WP  QV IGP+IE+GFYYDF + +PFS ++ 
Sbjct: 82  EFISRDDPRALELIRHDAAHVLAEAVQTLWPGTQVTIGPVIENGFYYDFFRNEPFSVEDF 141

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A IEKKM+EIIARD PF K     EK +++F  K EA+KVE++++IP  E + +Y QG+W
Sbjct: 142 AAIEKKMREIIARDQPFTKDVWDREKTKQVFRDKGEAFKVELVDAIPGNEPIRIYYQGDW 201

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPH+ STG++   FKLMKVAGAYWRGDSN PML+RIYGTA+  Q +L  YL  +E
Sbjct: 202 FDLCRGPHMTSTGKIGNAFKLMKVAGAYWRGDSNNPMLTRIYGTAFANQADLDAYLKQIE 261

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQV 299
           E+EKRDHRKL RE+DLFH  E+G GV+FWH KGW IFQ +I+YMRR++ +DY+E+N PQ+
Sbjct: 262 EAEKRDHRKLGRELDLFHFQEEGPGVVFWHAKGWTIFQAVIAYMRRRLAEDYDEVNAPQM 321

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           LD+ LW+ SGHW+ YR NMFA + A D  +D R F +KPMNCPGHV +F HGLKSYR+LP
Sbjct: 322 LDKSLWETSGHWEWYRENMFAAQSAGDEAEDKRWFTIKPMNCPGHVQLFKHGLKSYRDLP 381

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +RLAEFG V+R EPSG++HGLMRVRGFTQDDAHVFCT+EQ+ +ECLKI+ LI+S Y DFG
Sbjct: 382 LRLAEFGVVHRYEPSGAMHGLMRVRGFTQDDAHVFCTEEQLADECLKINELILSTYADFG 441

Query: 420 FE-KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           F+ ++ VKLSTRPEKRVGSDA WD AE +M  VL  I  +S +RI T    GEGAFYGPK
Sbjct: 442 FDGELTVKLSTRPEKRVGSDAAWDHAEAVMADVLKHIA-ASNNRIRTETNPGEGAFYGPK 500

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           FEY+L+DAIGRDWQCGT QVDFNLP RF AFY+++   K  PVM+HRA+ GSIERFIGI+
Sbjct: 501 FEYVLRDAIGRDWQCGTTQVDFNLPERFGAFYIDADGGKKAPVMVHRAICGSIERFIGIL 560

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+F G+ PLWL+P+QA+VTTITS   EYA+ +A+  +   L +E D RNE INYK+REH
Sbjct: 561 IEHFAGHFPLWLAPVQAVVTTITSDGDEYAKVVASAARRAGLRVELDLRNEKINYKVREH 620

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           S+ KIP +++ G KEA  +S+ IRR GS   +     +AI  L  E++PPD Q+
Sbjct: 621 SLAKIPALLVVGKKEAETQSVSIRRLGSDGQKVTPTGEAIAALVAEAVPPDIQR 674


>gi|298291991|ref|YP_003693930.1| threonyl-tRNA synthetase [Starkeya novella DSM 506]
 gi|296928502|gb|ADH89311.1| threonyl-tRNA synthetase [Starkeya novella DSM 506]
          Length = 666

 Score =  853 bits (2205), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 385/652 (59%), Positives = 504/652 (77%), Gaps = 1/652 (0%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIE 60
           P+ + LTFPDG+++ +    TG++VA SI++SLAKK++A+ ++G + DLSDP+ ++   E
Sbjct: 14  PATVNLTFPDGAVRAYASGTTGAEVAASIAKSLAKKSLAMKLDGTLSDLSDPITQDAKFE 73

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           +IT E P +L +IRH  AH++AEAVQ +WP  QV IGP+IE+GFYYDF + +PFS ++  
Sbjct: 74  LITRESPEALELIRHDAAHVLAEAVQELWPGTQVTIGPVIENGFYYDFFRNEPFSLEDFP 133

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEKKM+EI+ARD+ F K+    E+ + +F  K EA+KVE++++IPA + + +Y+QG WF
Sbjct: 134 AIEKKMREIVARDASFTKEVWDREETKRVFAEKGEAFKVELVDAIPADQQIKIYKQGNWF 193

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ S G+V   FKLMKVAGAYWRGD+  PML+RIYGTAW  ++EL  Y+  LEE
Sbjct: 194 DLCRGPHMPSVGKVGDAFKLMKVAGAYWRGDAKNPMLTRIYGTAWRDREELDAYILQLEE 253

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVL 300
           +EKRDHR+L REMDLFH  E+G GV+FWH KGW +FQ L++YMRR++  DY E+N PQVL
Sbjct: 254 AEKRDHRRLGREMDLFHFQEEGPGVVFWHPKGWNLFQNLVAYMRRRLAADYSEVNAPQVL 313

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D+ LW+ SGHW  Y+ NMF V+ A D   + R +ALKPMNCPGHV +F HGLKSYR+LP+
Sbjct: 314 DKSLWETSGHWGWYKDNMFKVQPAGDAEDNDRVYALKPMNCPGHVQIFKHGLKSYRDLPM 373

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLAEFG+V+R EPSG+LHGLMRVRGFTQDDAH+FCT+EQM  ECLKI+ LI+S Y DFGF
Sbjct: 374 RLAEFGAVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQMAAECLKINELILSTYADFGF 433

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           E+I+VKLSTRPEKRVGSD +WD AE++M+ VL  I+  S  +I TG+L GEGAFYGPKFE
Sbjct: 434 EEIVVKLSTRPEKRVGSDEVWDHAEDVMERVLTQIEAESGGKIKTGILPGEGAFYGPKFE 493

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           Y L+DAIGR+WQCGT QVDFNLP RF AFYV++  +K  PVMIHRA+ GS+ERF GI+IE
Sbjct: 494 YTLRDAIGREWQCGTTQVDFNLPERFGAFYVDADGQKKTPVMIHRAICGSMERFTGILIE 553

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +  G+ PLWL+P+QA+V TITS    YA+EIA   +   L +E D RNE INYK+REHS+
Sbjct: 554 HHAGHFPLWLAPVQAVVATITSDGDPYAEEIAAAARKMGLRVELDLRNEKINYKVREHSV 613

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
            K+P +I+ G KEA+ER++ IRR GS     ++L +A+  L  E+ PPD Q+
Sbjct: 614 AKVPALIVVGRKEAAERTVSIRRLGSQNQTTLTLDEALAALVAEASPPDLQR 665


>gi|316933337|ref|YP_004108319.1| threonyl-tRNA synthetase [Rhodopseudomonas palustris DX-1]
 gi|315601051|gb|ADU43586.1| threonyl-tRNA synthetase [Rhodopseudomonas palustris DX-1]
          Length = 693

 Score =  853 bits (2203), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/650 (57%), Positives = 500/650 (76%), Gaps = 2/650 (0%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           I +TFPDG  + +P   TG D+A+ IS SLAK+ VA+A+NG + DL+DP+ + + I+ + 
Sbjct: 33  ITITFPDGKTREYPRGTTGLDIAKGISPSLAKRTVAMALNGTLTDLADPIEDNTAIDFVA 92

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D R+L +IRH CAH++AEAVQS+WP  QV IGP+IE+GFYYDF + +PF+ ++ A IE
Sbjct: 93  RDDGRALELIRHDCAHVLAEAVQSLWPGTQVTIGPVIENGFYYDFFRNEPFTPEDFAAIE 152

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           KKM+EIIARD PF K+  + ++A+++F    EA+KVE++ +IP  + + +Y+QGEWFDLC
Sbjct: 153 KKMREIIARDKPFTKEVWTRDEAKKVFADNGEAFKVELVAAIPEDQTIKIYKQGEWFDLC 212

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG++   FKLMKVAGAYWRGDSN PML+RIYGTAW  Q++L  YL+ +EE+EK
Sbjct: 213 RGPHMTSTGKIGTAFKLMKVAGAYWRGDSNNPMLTRIYGTAWAKQEDLDAYLHQIEEAEK 272

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQH 303
           RDHRKL RE+DLFH  E+G GV+FWH KGW +FQ+L+ YMRR++  DY+E+N PQ+LD+ 
Sbjct: 273 RDHRKLGRELDLFHFQEEGPGVVFWHAKGWSLFQSLVGYMRRRLAGDYDEVNAPQILDKV 332

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+ SGHW+ YR NMFA + A +  +D R FALKPMNCPGHV +F HGLKSYR+LP+R+A
Sbjct: 333 LWETSGHWEWYRENMFAAQSAGEDAEDKRWFALKPMNCPGHVQIFKHGLKSYRDLPLRMA 392

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE-K 422
           EFG V+R EPSG++HGLMRVRGFTQDDAHVFCT+ Q+  EC+KI++LI+S Y DFGFE +
Sbjct: 393 EFGVVHRYEPSGAMHGLMRVRGFTQDDAHVFCTEAQLAEECIKINDLILSTYSDFGFEGE 452

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + VKLSTRP+KRVG+D +WD AE +M  VL  IK    +RI T +  GEGAFYGPKFEY+
Sbjct: 453 LTVKLSTRPDKRVGTDEMWDHAERVMATVLSEIKAKGGNRIKTEINPGEGAFYGPKFEYV 512

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+DAIGRDWQCGT QVDFNLP RF AFY+++   K  PVM+HRA+ GS+ERF GI+IE++
Sbjct: 513 LRDAIGRDWQCGTTQVDFNLPERFGAFYIDADGAKKAPVMVHRAICGSMERFTGILIEHY 572

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            GN PLWL+P+Q +VTTITS   EYA+++   L+   L  + D RNE IN+K+REHS+ K
Sbjct: 573 AGNFPLWLAPVQVVVTTITSEGDEYAKKVLAALRKAGLRADIDLRNEKINFKVREHSLAK 632

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           +P +++ G KEA   S+ +RR GS   + +   +AI  L  E+ PPD ++
Sbjct: 633 VPALLVVGKKEAETHSVSVRRLGSDGQKVMPTDEAIAALVDEATPPDVRR 682


>gi|146339967|ref|YP_001205015.1| threonyl-tRNA synthetase [Bradyrhizobium sp. ORS278]
 gi|146192773|emb|CAL76778.1| Threonyl-tRNA synthetase (Threonine--tRNA ligase) (ThrRS)
           [Bradyrhizobium sp. ORS278]
          Length = 688

 Score =  852 bits (2202), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/650 (58%), Positives = 500/650 (76%), Gaps = 3/650 (0%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           I ++FPDG+ + +P   TG D+A+ IS SLAK+ VA+A+NG V DL+DP+ E + +E++ 
Sbjct: 34  ITISFPDGAKREYPRGTTGLDIAKGISPSLAKRTVAMALNGDVADLNDPINEDARLELVD 93

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +DPR+L +IRH CAH++AEAVQ++WP  QV IGP+IE+GFYYDF + +PF+ ++ A IE
Sbjct: 94  RDDPRALELIRHDCAHVLAEAVQALWPGTQVTIGPVIENGFYYDFFRNEPFTPEDFAAIE 153

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           KKM+EII RD PF K+    EK +++F  K EA+KVE++++IP  E + +Y QG+WFDLC
Sbjct: 154 KKMREIIGRDKPFTKEVWDREKTKQVFRDKGEAFKVELVDAIPGNEPIKIYYQGDWFDLC 213

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG++   FKLMKVAGAYWRGDSN PML+RIYGTA+  Q++L  YL  +EE+EK
Sbjct: 214 RGPHMTSTGKIGNAFKLMKVAGAYWRGDSNNPMLTRIYGTAFAKQEQLDAYLKQIEEAEK 273

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQH 303
           RDHRKL RE+DLFH  E+G GV+FWH KGW IFQ LI+YMRR++  DY+E+N PQ+LD+ 
Sbjct: 274 RDHRKLGRELDLFHFQEEGPGVVFWHPKGWSIFQALIAYMRRRLAGDYDEVNAPQILDKS 333

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+ SGHW+ YR NMFA + A D  +D R FALKPMNCPGHV +F HGLKSYR+LP+RLA
Sbjct: 334 LWETSGHWNWYRENMFAAQSAGDEAEDKRWFALKPMNCPGHVQIFKHGLKSYRDLPMRLA 393

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE-K 422
           EFG V+R E SG++HGLMRVRGFTQDDAHVFCT++Q+  ECLKI++LI+S Y DFGFE +
Sbjct: 394 EFGVVHRYEASGAMHGLMRVRGFTQDDAHVFCTEDQLAEECLKINDLILSTYSDFGFEGE 453

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + VKLSTRPEKRVG+D +WD AE +M  VL+ IK +  + I T +  GEGAFYGPKFEY+
Sbjct: 454 LTVKLSTRPEKRVGTDEMWDHAERVMATVLNEIK-AQNNHIRTEINPGEGAFYGPKFEYV 512

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+DAIGRDWQCGT QVDFNLP RF AFY+++   K  PVM+HRA+ GS+ERFIGI+IE++
Sbjct: 513 LRDAIGRDWQCGTTQVDFNLPERFGAFYIDADGAKKAPVMVHRAICGSMERFIGILIEHY 572

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G+ PLWL+P Q +VTTITS   EYA+++   L+   L  E D RNE INYK+REHS++K
Sbjct: 573 AGSFPLWLAPTQVVVTTITSEGDEYAKQVLAALRRAGLRAEIDLRNEKINYKVREHSLQK 632

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           IP +++ G KEA   S+ +RR G      +   DAI  L  E+ PPD ++
Sbjct: 633 IPALLVVGKKEAETHSVSVRRLGRDGQTVMPTADAIAALVDEATPPDVRR 682


>gi|170744367|ref|YP_001773022.1| threonyl-tRNA synthetase [Methylobacterium sp. 4-46]
 gi|168198641|gb|ACA20588.1| threonyl-tRNA synthetase [Methylobacterium sp. 4-46]
          Length = 670

 Score =  851 bits (2198), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 385/647 (59%), Positives = 493/647 (76%), Gaps = 6/647 (0%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           LTFPDG+ + +    TG  V E I++SLAK+ VA+A++G+V DL D + R+  IE +   
Sbjct: 4   LTFPDGATRAYDAAVTGRAVVEGIAKSLAKRTVAMALDGQVRDLDDAITRDARIEFLDRT 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           DPR+L +IRH CAH++AEAVQS+WP  QV IGP+IE+GFYYDF +E PFS ++   IE +
Sbjct: 64  DPRALELIRHDCAHVLAEAVQSLWPGTQVTIGPVIENGFYYDFYRETPFSPEDFPAIEAR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+EIIARD+ F K+  + +  R LF  K E++KVE++++IP  E++ +YRQGEWFDLCRG
Sbjct: 124 MREIIARDAAFTKEVWARDAVRALFAEKGESFKVELVDAIPEGEDLKIYRQGEWFDLCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PH+ STG+V   FKLMKVAGAYWRGDS +PMLSRIYGTAW +Q +L  YL+ LEE+E+RD
Sbjct: 184 PHMTSTGKVGTAFKLMKVAGAYWRGDSTKPMLSRIYGTAWASQADLDAYLHRLEEAERRD 243

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHLW 305
           HR+L REMDLFH  E+G GV+FWH KGW +FQ LI+YMRR++K DY E+N PQ+LD+ LW
Sbjct: 244 HRRLGREMDLFHFQEEGPGVVFWHPKGWTLFQELIAYMRRRLKADYREVNAPQILDKALW 303

Query: 306 QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEF 365
           + SGHWD YR NMF  K  D+     R FA+KPMNCPGHV +F HGLKSYR+LP+RLAEF
Sbjct: 304 ETSGHWDWYRENMFVTKTEDE-----RVFAIKPMNCPGHVQIFKHGLKSYRDLPLRLAEF 358

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
           G+V R EPSG+LHGLMRVR FTQDDAHVFCT+ Q+  ECLKI++LI+S Y DFGF++I+V
Sbjct: 359 GAVSRYEPSGALHGLMRVRAFTQDDAHVFCTEAQLAAECLKINDLILSTYADFGFDEIVV 418

Query: 426 KLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKD 485
           KLSTRPEKRVGSDALWD AE +M  VL  I+  S  RI T +  GEGAFYGPKFEY+L+D
Sbjct: 419 KLSTRPEKRVGSDALWDHAEAVMTRVLSEIEEQSGGRIRTAINPGEGAFYGPKFEYVLRD 478

Query: 486 AIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           AIGRDWQCGT QVDFNLP RF AFYV++  +K  PVM+HRA+ GS+ERF GI+IE+F G+
Sbjct: 479 AIGRDWQCGTTQVDFNLPERFGAFYVDADGQKKTPVMVHRAICGSMERFAGILIEHFAGH 538

Query: 546 LPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPI 605
            PLWL+P+Q +V TITS A  YA ++    ++  L  E D RNE INYK+REHS  K+P+
Sbjct: 539 FPLWLAPLQVVVATITSDADPYASDVLAACEAAGLRAEIDLRNEKINYKVREHSHAKVPV 598

Query: 606 IIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           +++ G +E  ER++ IRR GS  T+ + L  A+  L  E+  PD ++
Sbjct: 599 MLVVGRREGEERTVSIRRLGSQQTRTLPLDQALADLVGEAATPDRRR 645


>gi|148256517|ref|YP_001241102.1| threonyl-tRNA synthetase [Bradyrhizobium sp. BTAi1]
 gi|146408690|gb|ABQ37196.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Bradyrhizobium
           sp. BTAi1]
          Length = 688

 Score =  851 bits (2198), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/650 (58%), Positives = 500/650 (76%), Gaps = 3/650 (0%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           I + FPDG+ + +P   TG D+A+ IS SLAK+ VA+A+NG + DL+DP+ E + +E++ 
Sbjct: 34  ITIAFPDGAKREYPRGTTGLDIAKGISPSLAKRTVAMALNGDLADLNDPITEDAKLELVD 93

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +DPR+L +IRH CAH++AEAVQS+WP  QV IGP+IE+GFYYDF + +PF+ ++ A IE
Sbjct: 94  RDDPRALELIRHDCAHVLAEAVQSLWPGTQVTIGPVIENGFYYDFFRNEPFTPEDFAAIE 153

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           KKM+EII RD PF K+    EK +++F  K EA+KVE++++IP  E + +Y QG+WFDLC
Sbjct: 154 KKMREIIGRDKPFTKEVWDREKTKQVFRDKGEAFKVELVDAIPGDEPIKIYSQGDWFDLC 213

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG++   FKLMKVAGAYWRGDSN PML+RIYGTA+  Q++L  YL  +EE+EK
Sbjct: 214 RGPHMTSTGKIGNAFKLMKVAGAYWRGDSNNPMLTRIYGTAFARQEQLDAYLKQIEEAEK 273

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQH 303
           RDHRKL RE+DLFH  E+G GV+FWH KGW IFQ LI+YMRR++  +Y+E+N PQ+LD+ 
Sbjct: 274 RDHRKLGRELDLFHFQEEGPGVVFWHPKGWSIFQALIAYMRRRLAGEYDEVNAPQILDKS 333

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+ SGHW+ YR NMFA + A D  +D R FALKPMNCPGHV +F HGLKSYR+LP+RLA
Sbjct: 334 LWETSGHWNWYRENMFAAQSAGDEAEDKRWFALKPMNCPGHVQIFKHGLKSYRDLPLRLA 393

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE-K 422
           EFG V+R E SG++HGLMRVRGFTQDDAH+FCT++Q+  ECLKI++LI+S Y DFGFE +
Sbjct: 394 EFGVVHRYEASGAMHGLMRVRGFTQDDAHIFCTEDQLAEECLKINDLILSTYSDFGFEGE 453

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + VKLSTRPEKRVG+D +WD AE +M  VL+ IK + ++ I T +  GEGAFYGPKFEY+
Sbjct: 454 LTVKLSTRPEKRVGTDEMWDHAERVMATVLNEIK-AQRNNIRTEINPGEGAFYGPKFEYV 512

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+DAIGRDWQCGT QVDFNLP RF AFY+++   K  PVM+HRA+ GS+ERFIGI+IE++
Sbjct: 513 LRDAIGRDWQCGTTQVDFNLPERFGAFYIDADGAKKAPVMVHRAICGSMERFIGILIEHY 572

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G+ PLWL+P Q +VTTITS   EYA+++   L+   L  E D RNE INYK+REHS++K
Sbjct: 573 AGSFPLWLAPTQVVVTTITSEGDEYAKQVLAALRRAGLRAEIDLRNEKINYKVREHSMQK 632

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           IP +++ G KEA   S+ +RR G      +   DAI  L  E+ PPD Q+
Sbjct: 633 IPALLVVGKKEAETHSVSVRRLGRDGQTVMPTADAIAALVDEATPPDVQR 682


>gi|319405749|emb|CBI79372.1| Threonyl-tRNA synthetase [Bartonella sp. AR 15-3]
          Length = 654

 Score =  850 bits (2196), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 392/653 (60%), Positives = 500/653 (76%), Gaps = 2/653 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSI 59
           M   I L+FPDGS +N+P   TG ++A SIS+SLAKKAVA +++G + DLSDP+ + G +
Sbjct: 1   MSCSIFLSFPDGSKRNYPSETTGLELAASISKSLAKKAVAYSLDGALKDLSDPLEQSGQV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT +DPR+L +IRH CAH++AEAVQ ++PE QV IGP+IE+GFYYDF ++QPF+ D+L
Sbjct: 61  EIITRDDPRALELIRHDCAHVLAEAVQELFPETQVTIGPVIENGFYYDFARKQPFTLDDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM EII R+ PF K+ LS EKA+++F  K E YK+E+++SIP  +++ +Y QG+W
Sbjct: 121 TTIEKKMHEIIQRNKPFRKEILSREKAKKIFSEKNEFYKIELIDSIPDDQDLKIYYQGDW 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPH++STGQ+   FKLMKVAGAYWRGDSN  ML+RIYGTA+  + +L  YL+ LE
Sbjct: 181 FDLCRGPHMQSTGQIGNAFKLMKVAGAYWRGDSNNLMLTRIYGTAFTNENDLKAYLHMLE 240

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+EKRDHR+L REMDLFH  E+  G+IFWH KGWK+FQ LISYMRR++ +  Y E+  PQ
Sbjct: 241 EAEKRDHRRLGREMDLFHFQEESPGMIFWHPKGWKMFQNLISYMRRRLDNHKYAEVQAPQ 300

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           VLD+ LW+ SGHW+ Y+ NMF    A D   +   +ALKPMNCPGHV +F HGLKSYR+L
Sbjct: 301 VLDKSLWEISGHWEWYKENMFKTIPAADDWNNEHIYALKPMNCPGHVQIFKHGLKSYRDL 360

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFG V+R EPSGSLHGLMRVR FTQDDAH+FCT+EQ+ +ECL I++LI+S Y DF
Sbjct: 361 PIRLAEFGLVHRYEPSGSLHGLMRVRSFTQDDAHIFCTEEQLADECLSINDLILSTYADF 420

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF++I +KLSTRPEKRVGSD LWD AE+IM  VL TI+     R+   +L GEGAFYGPK
Sbjct: 421 GFKEISIKLSTRPEKRVGSDELWDHAESIMTFVLKTIEKKFSGRVKISILPGEGAFYGPK 480

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           FEY L DAIGR+WQCGT QVDFNLP RF AFY++  SEK  PVMIHRA+FGS+ERF+GI+
Sbjct: 481 FEYTLTDAIGREWQCGTTQVDFNLPERFGAFYIDKDSEKRQPVMIHRAIFGSMERFLGIL 540

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IENF G++P WL+P Q +V TITS + EYA++I   LK+  L    D RNE INYKIREH
Sbjct: 541 IENFSGHIPFWLAPQQIVVATITSDSNEYAKKITEKLKAIGLLATLDSRNEKINYKIREH 600

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
            ++KIP+I++CG +EA   S+ +RR GS     + +      L  E+ PPD +
Sbjct: 601 FLQKIPVILVCGKREAETNSVNMRRLGSVKQTFLPIEKVFQQLLDEATPPDLR 653


>gi|90417791|ref|ZP_01225703.1| threonyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1]
 gi|90337463|gb|EAS51114.1| threonyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1]
          Length = 659

 Score =  849 bits (2193), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 387/654 (59%), Positives = 510/654 (77%), Gaps = 7/654 (1%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M + + LTFPDGS++ +    +G D+A  IS+SL KK+VA A++G+V DL+DPV R G+I
Sbjct: 2   MANAVSLTFPDGSVREYEADTSGRDIAGGISKSLLKKSVAYALDGEVRDLADPVGRAGAI 61

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT +DPR+L +IRH  AH+MAEAVQ +WP  QV IGP+IE+GF+YDF ++ PF+ D+L
Sbjct: 62  EIITRDDPRALELIRHDAAHVMAEAVQELWPGTQVTIGPVIENGFFYDFARDTPFTPDDL 121

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM EII R++PF K+  S +KA+ +F  K EAYKVE++++IP  +++ +Y QG+W
Sbjct: 122 PVIEKKMVEIIRRNAPFTKEVWSRDKAKAVFAEKGEAYKVELVDAIPEGQDLKIYSQGDW 181

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPH+ +TGQ+   FKLMKVAGAYWRGDSN PML+RIYGTAW T+++L  YL+ LE
Sbjct: 182 FDLCRGPHMAATGQIGDAFKLMKVAGAYWRGDSNNPMLTRIYGTAWATKEQLAAYLHMLE 241

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+EKRDHR+L REMDLFH  ED  G +FWH KGW+++QTL+SY+RR+ + + Y+E+N PQ
Sbjct: 242 EAEKRDHRRLGREMDLFHFQEDAPGTVFWHPKGWRLYQTLVSYVRRRQEAEGYQEVNAPQ 301

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L++ LW+ SGHW+ Y  +MF  +  D+     R FALKPMNCPGHV +F HGLKSYR+L
Sbjct: 302 LLERSLWETSGHWEKYHEDMFVTETEDE-----RVFALKPMNCPGHVQIFKHGLKSYRDL 356

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+++AEFG+V+R EPSG+LHGLMRVR FTQDDAHVFCT+EQ+  E LKI++LI+SIY+DF
Sbjct: 357 PLKIAEFGAVHRYEPSGALHGLMRVRAFTQDDAHVFCTEEQITAESLKINDLILSIYRDF 416

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE ++VKLSTRPEKRVGSD LWD AE  M+ VL  I+   +  I T V  G+GAFYGPK
Sbjct: 417 GFEDVLVKLSTRPEKRVGSDELWDKAEASMRDVLAIIEEQGKGHITTAVAEGDGAFYGPK 476

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           +EY L+DAIGR WQ GT QVDFNLP RF AFY++  SEK  PVM+HRA+ GS+ERFIGI+
Sbjct: 477 YEYTLRDAIGRQWQVGTNQVDFNLPGRFGAFYIDRDSEKKTPVMLHRAMLGSVERFIGIL 536

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IEN  G+LPLWLSP+Q +V TITS A +YA ++A  L+   L +ETD RNE INYK+REH
Sbjct: 537 IENCAGHLPLWLSPLQVVVATITSEADDYALQVAEELRQAGLQVETDLRNEKINYKVREH 596

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           S+ K+P+I++CG +EA ER++ IRR G+     ++L DA+  L  E++PPD ++
Sbjct: 597 SMAKVPVIMVCGKREAEERTVNIRRLGAREQTPMALDDAVAALADEAVPPDLKR 650


>gi|158422571|ref|YP_001523863.1| threonyl-tRNA synthetase [Azorhizobium caulinodans ORS 571]
 gi|158329460|dbj|BAF86945.1| threonyl-tRNA synthetase [Azorhizobium caulinodans ORS 571]
          Length = 636

 Score =  848 bits (2192), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 388/628 (61%), Positives = 497/628 (79%), Gaps = 1/628 (0%)

Query: 26  VAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIRHSCAHIMAEA 84
           +A +IS+SL KKAVAV ++G + DLS+P+ ++  IEI+T +DPR+L +IRH  AH++AEA
Sbjct: 1   MAAAISKSLLKKAVAVTLDGALTDLSEPITKDARIEIVTRDDPRALELIRHDAAHVLAEA 60

Query: 85  VQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHE 144
           VQ ++P  QV IGP+IE+GFYYDF + +PF++D+L +IE KM+EIIARD PF K+  S +
Sbjct: 61  VQELFPGTQVTIGPVIENGFYYDFARNEPFTTDDLPKIEAKMKEIIARDKPFTKEVWSRD 120

Query: 145 KARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVA 204
           +A+ +F  K EA+KVE++++IP  ++V +Y+QGEWFDLCRGPH+ STG++   FKLMKVA
Sbjct: 121 EAKRVFRDKGEAFKVELVDAIPEDQDVKIYKQGEWFDLCRGPHMPSTGKIGTAFKLMKVA 180

Query: 205 GAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSG 264
           GAYWRGDSN PML+RIYGTAW  Q EL  YL+ LEE+EKRDHR+L REMDLFH  E+G G
Sbjct: 181 GAYWRGDSNNPMLTRIYGTAWKDQSELDAYLHRLEEAEKRDHRRLGREMDLFHFQEEGPG 240

Query: 265 VIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCA 324
           V+FWH KGW +FQ L+SYMRR++K DY E+N PQVLD+ LW+ SGHW  Y+ NMF V+ A
Sbjct: 241 VVFWHPKGWSLFQGLVSYMRRRLKADYNEVNAPQVLDKSLWETSGHWGWYKENMFKVQSA 300

Query: 325 DDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVR 384
            +   D R FALKPMNCPGHV +F HGLKSYR+LP+RLAEFG+V+R EPSG+LHGLMRVR
Sbjct: 301 GEETGDERVFALKPMNCPGHVQIFKHGLKSYRDLPLRLAEFGAVHRYEPSGALHGLMRVR 360

Query: 385 GFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
           GFTQDDAHVFCT+EQM  ECLKI++LI+S Y DFGFE+I VKLSTRPEKRVGSDA+WD A
Sbjct: 361 GFTQDDAHVFCTEEQMAAECLKINDLILSTYADFGFEEITVKLSTRPEKRVGSDAVWDHA 420

Query: 445 ENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPS 504
           E++M  VL  I+  S  RI TG+L GEGAFYGPKFEY L DAIGR+WQCGT QVDFNLP 
Sbjct: 421 EDVMSRVLKQIEAESGGRIKTGILPGEGAFYGPKFEYTLSDAIGREWQCGTTQVDFNLPE 480

Query: 505 RFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA 564
           RF AFYV++  +K  PVMIHRA+ GS+ERF GI+IE+F G+ PLWL+P+Q  V TIT  A
Sbjct: 481 RFGAFYVDADGQKKTPVMIHRAICGSMERFTGILIEHFAGHFPLWLAPVQLAVCTITQEA 540

Query: 565 VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRF 624
            +YA E+A+  ++  L +E D RNE I+YK+REHS+ KIP+    G KEA+ER++ IRR 
Sbjct: 541 DDYAAEVASAARALDLKVELDTRNEKISYKVREHSLAKIPVQFALGKKEAAERTVSIRRL 600

Query: 625 GSTTTQKVSLLDAIPILTKESLPPDCQK 652
           GS   + + L +A+ +L  E++PPD ++
Sbjct: 601 GSQEQKVLPLEEALKLLADEAVPPDLKR 628


>gi|192292254|ref|YP_001992859.1| threonyl-tRNA synthetase [Rhodopseudomonas palustris TIE-1]
 gi|192286003|gb|ACF02384.1| threonyl-tRNA synthetase [Rhodopseudomonas palustris TIE-1]
          Length = 687

 Score =  848 bits (2192), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/650 (57%), Positives = 498/650 (76%), Gaps = 2/650 (0%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           I +TFPDG  + +P   TG D+A+ IS SLAK+ V +A+NG + DL+DP+ + + I+ + 
Sbjct: 33  ITITFPDGKTREYPRGTTGLDIAKGISPSLAKRTVVMALNGTLTDLADPIEDNAQIDFVA 92

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D R+L +IRH CAH++AEAVQS+WP  QV IGP IE+GFYYDF + +PF+ ++ A IE
Sbjct: 93  RDDARALELIRHDCAHVLAEAVQSLWPGTQVTIGPTIENGFYYDFFRNEPFTPEDFAAIE 152

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           KKM+EIIARD PF K+  + ++A+++F    EA+KVE++++IP  + + +Y+QGEWFDLC
Sbjct: 153 KKMREIIARDKPFTKEVWTRDEAKKVFADNGEAFKVELVDAIPEDQTIKIYKQGEWFDLC 212

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG++   FKLMKVAGAYWRGDSN PML+RIYGTA+  Q +L  YL+ +EE+EK
Sbjct: 213 RGPHMTSTGKIGTAFKLMKVAGAYWRGDSNNPMLTRIYGTAFAKQDDLDAYLHQIEEAEK 272

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQH 303
           RDHRKL RE+DLFH  E+G GV+FWH KGW +FQ+L+ YMRR++  DY+E+N PQ+LD+ 
Sbjct: 273 RDHRKLGRELDLFHFQEEGPGVVFWHAKGWSLFQSLVGYMRRRLAGDYDEVNAPQILDKV 332

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+ SGHW+ YR NMFA + A D  +D R FALKPMNCPGHV +F HGLKSYR+LP+RLA
Sbjct: 333 LWETSGHWEWYRENMFAAQSAGDDAEDKRWFALKPMNCPGHVQIFKHGLKSYRDLPLRLA 392

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE-K 422
           EFG V+R EPSG++HGLMRVRGFTQDDAHVFCT+ Q+  EC+KI++LI+S Y DFGFE +
Sbjct: 393 EFGVVHRYEPSGAMHGLMRVRGFTQDDAHVFCTEAQLAEECIKINDLILSTYSDFGFEGE 452

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + VKLSTRPEKRVG+D +WD AE +M  VL  IK    +RI T +  GEGAFYGPKFEY+
Sbjct: 453 LTVKLSTRPEKRVGTDEMWDHAERVMATVLSEIKAKGGNRIKTEINPGEGAFYGPKFEYV 512

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+DAIGRDWQCGT QVDFNLP RF AFY+++   K  PVM+HRA+ GS+ERF GI+IE++
Sbjct: 513 LRDAIGRDWQCGTTQVDFNLPERFGAFYIDADGAKKAPVMVHRAICGSMERFTGILIEHY 572

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            GN PLWL+P+Q +VTTITS   +YA+++   L+   L  + D RNE IN+K+REHS+ K
Sbjct: 573 AGNFPLWLAPVQVVVTTITSEGDDYAKKVLAALRKAGLRADIDLRNEKINFKVREHSLAK 632

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           +P +++ G KEA   S+ +RR GS   + +   +AI  L  E+ PPD ++
Sbjct: 633 VPALLVVGKKEAESHSVSVRRLGSEGQKVMPTDEAIAALVDEATPPDVKR 682


>gi|39936469|ref|NP_948745.1| threonyl-tRNA synthetase [Rhodopseudomonas palustris CGA009]
 gi|73919820|sp|Q6N4D3|SYT_RHOPA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|39650325|emb|CAE28847.1| threonyl-tRNA synthetase [Rhodopseudomonas palustris CGA009]
          Length = 658

 Score =  848 bits (2191), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/650 (57%), Positives = 498/650 (76%), Gaps = 2/650 (0%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           I +TFPDG  + +P   TG D+A+ IS SLAK+ V +A+NG + DL+DP+ +  SI+ + 
Sbjct: 4   ITITFPDGKTREYPRGTTGLDIAKGISPSLAKRTVVMALNGTLTDLADPIDDNASIDFVA 63

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D R+L +IRH CAH++AEAVQS+WP  QV IGP IE+GFYYDF + +PF+ ++ A IE
Sbjct: 64  RDDARALELIRHDCAHVLAEAVQSLWPGTQVTIGPTIENGFYYDFFRNEPFTPEDFAAIE 123

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           KKM+EIIARD PF K+  + ++A+++F    EA+KVE++++IP  + + +Y+QGEWFDLC
Sbjct: 124 KKMREIIARDKPFTKEVWTRDEAKKVFADNGEAFKVELVDAIPEDQTIKIYKQGEWFDLC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG++   FKLMKVAGAYWRGDSN PML+RIYGTA+  Q +L  YL+ +EE+EK
Sbjct: 184 RGPHMTSTGKIGTAFKLMKVAGAYWRGDSNNPMLTRIYGTAFAKQDDLDAYLHQIEEAEK 243

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQH 303
           RDHRKL RE+DLFH  E+G GV+FWH KGW +FQ+L+ YMRR++  DY+E+N PQ+LD+ 
Sbjct: 244 RDHRKLGRELDLFHFQEEGPGVVFWHAKGWSLFQSLVGYMRRRLAGDYDEVNAPQILDKV 303

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+ SGHW+ YR NMFA + A D  +D R FALKPMNCPGHV +F HGLKSYR+LP+RLA
Sbjct: 304 LWETSGHWEWYRENMFAAQSAGDDAEDKRWFALKPMNCPGHVQIFKHGLKSYRDLPLRLA 363

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE-K 422
           EFG V+R EPSG++HGLMRVRGFTQDDAHVFCT+ Q+  EC+KI++LI+S Y DFGFE +
Sbjct: 364 EFGVVHRYEPSGAMHGLMRVRGFTQDDAHVFCTEAQLAEECIKINDLILSTYSDFGFEGE 423

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + VKLSTRPEKRVG+D +WD AE +M  VL  IK    +RI T +  GEGAFYGPKFEY+
Sbjct: 424 LTVKLSTRPEKRVGTDEMWDHAERVMATVLSEIKAKGGNRIKTEINPGEGAFYGPKFEYV 483

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+DAIGRDWQCGT QVDFNLP RF AFY+++   K  PVM+HRA+ GS+ERF GI+IE++
Sbjct: 484 LRDAIGRDWQCGTTQVDFNLPERFGAFYIDADGAKKAPVMVHRAICGSMERFTGILIEHY 543

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            GN PLWL+P+Q +VTTITS   +YA+++   L+   L  + D RNE IN+K+REHS+ K
Sbjct: 544 AGNFPLWLAPVQVVVTTITSEGDDYAKKVLAALRKAGLRADIDLRNEKINFKVREHSLAK 603

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           +P +++ G KEA   S+ +RR GS   + +   +AI  L  E+ PPD ++
Sbjct: 604 VPALLVVGKKEAESHSVSVRRLGSDGQKVMPTDEAIAALVDEATPPDVKR 653


>gi|27380648|ref|NP_772177.1| threonyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110]
 gi|27353813|dbj|BAC50802.1| threonyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110]
          Length = 723

 Score =  847 bits (2188), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 384/650 (59%), Positives = 498/650 (76%), Gaps = 3/650 (0%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           + + LTFPDG+ + +    TG ++A+ IS SLAK+ VA+A++G V DL DP+  +  IE+
Sbjct: 68  AKVTLTFPDGARREYDKSITGLEIAKGISPSLAKRTVAMALDGVVADLDDPIEADAKIEL 127

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           I  +DPR+L +IRH CAH++AEAVQ++WP  QV IGP+IE+GFYYDF + +PF+ ++ A 
Sbjct: 128 INRDDPRALELIRHDCAHVLAEAVQTLWPGTQVTIGPVIENGFYYDFFRNEPFTPEDFAA 187

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEKKM+EIIARD PF K+    EK +++F  K EA+KVE++++IP  E + +Y QG+WFD
Sbjct: 188 IEKKMREIIARDKPFTKEVWDREKTKQVFRDKGEAFKVELVDAIPGNEPIKIYYQGDWFD 247

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ STG+V   FKLMKVAGAYWRGDSN PML+RIYGTA+  Q++L  YL  +EE+
Sbjct: 248 LCRGPHMTSTGKVGNAFKLMKVAGAYWRGDSNNPMLTRIYGTAFAKQEDLDAYLKQIEEA 307

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLD 301
           EKRDHRKL RE+DLFH  E+G GV+FWH KGW IFQ LI+YMRR++  DY E+N PQ+LD
Sbjct: 308 EKRDHRKLGRELDLFHFQEEGPGVVFWHPKGWTIFQQLIAYMRRRLTGDYSEVNAPQILD 367

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW  YR NMFA + A D  +D R FALKPMNCPGHV +F HGLKSYR+LP+R
Sbjct: 368 KVLWETSGHWGWYRENMFAAQSAGDEAEDKRWFALKPMNCPGHVQIFKHGLKSYRDLPLR 427

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFG V+R EPSG++HGLMRVRGFTQDDAH+FCT++Q+  ECLKI++LI+S Y DFGF 
Sbjct: 428 LAEFGVVHRYEPSGAMHGLMRVRGFTQDDAHIFCTEDQLAEECLKINDLILSTYADFGFT 487

Query: 422 -KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
             + VKLSTRP+KRVG+DA+WD AE +M  VL  I+ S  + I T +  GEGAFYGPKFE
Sbjct: 488 GDLTVKLSTRPDKRVGTDAMWDHAERVMATVLREIQ-SQNNHIKTEINPGEGAFYGPKFE 546

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           Y+L+DAIGRDWQCGT QVDFNLP RF AFY++    K  PVM+HRA+ GS+ER+IGI+IE
Sbjct: 547 YVLRDAIGRDWQCGTTQVDFNLPERFGAFYIDHDGGKKPPVMVHRAICGSMERYIGILIE 606

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           ++ GN PLWLSP+QA+VTTITS   EYA+++    +   L +E D RNE INYK+REHS+
Sbjct: 607 HYAGNFPLWLSPVQAVVTTITSEGDEYAKQVLEQARRAGLRVEIDLRNEKINYKVREHSL 666

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDC 650
            KIP +++ G KEA   S+ +RR GS   + ++  +AI  L +E+ PPD 
Sbjct: 667 AKIPALLVVGKKEAETHSVSVRRLGSDGQKVMTTAEAIAALVEEATPPDV 716


>gi|299135303|ref|ZP_07028494.1| threonyl-tRNA synthetase [Afipia sp. 1NLS2]
 gi|298590280|gb|EFI50484.1| threonyl-tRNA synthetase [Afipia sp. 1NLS2]
          Length = 681

 Score =  847 bits (2187), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/653 (58%), Positives = 506/653 (77%), Gaps = 2/653 (0%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IE 60
           P  I +TFPDG+ + FP   TG ++A+ IS SLAK+ VA+A++G V DL+D +   + IE
Sbjct: 24  PDMIAVTFPDGAKREFPKGTTGFEIAKGISPSLAKRTVAMALDGVVSDLTDGIEHDTKIE 83

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            I  +DPR+L +IRH  AH++AEAVQ++WP  QV IGP+I++GFYYDF + +PF+ ++ A
Sbjct: 84  FINRDDPRALELIRHDAAHVLAEAVQTLWPGTQVTIGPVIDNGFYYDFFRNEPFTPEDFA 143

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEKKM+EIIARD PF K+  + E+ +++F    E +KVE+L++IPA + + +Y+QG+WF
Sbjct: 144 AIEKKMREIIARDKPFTKEVWTREQTKQVFSDNGEMFKVELLDAIPADQQIKIYKQGDWF 203

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ S G+V   FKLMKVAGAYWRGDSN PML+RIYGTA+ +QQ+L  YL  LEE
Sbjct: 204 DLCRGPHMTSVGKVGNAFKLMKVAGAYWRGDSNNPMLTRIYGTAFASQQDLDAYLKQLEE 263

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVL 300
           +EKRDHR+L REMDLFH  E+G GV+FWH KGW +FQ +I+YMRR++  DY+E+N PQ+L
Sbjct: 264 AEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWTLFQAIIAYMRRRLAADYDEVNAPQML 323

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D+ LW+ SGHW+ YR NMFA + A D  +D R FA+KPMNCPGHV +F HGLKSYRELP+
Sbjct: 324 DKSLWETSGHWEWYRENMFAAQSAGDEAEDKRWFAIKPMNCPGHVLIFKHGLKSYRELPI 383

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLAEFG V+R EPSG++HGLMRVRGFTQDDAH+FCT++Q+ +ECLKI++LI+S Y +FGF
Sbjct: 384 RLAEFGVVHRYEPSGAMHGLMRVRGFTQDDAHIFCTEDQLADECLKINDLILSTYANFGF 443

Query: 421 E-KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           E ++ VKLSTRP+KRVG+DA WD AE++M  VL  I+  S +RI T +  GEGAFYGPKF
Sbjct: 444 EGELTVKLSTRPDKRVGTDAAWDHAESVMTKVLAQIEAKSGNRIKTSINPGEGAFYGPKF 503

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           EY+L+DAIGR+WQCGT QVDFNLP RF AFY++ HS K  PVM+HRA+ GS+ERF GI+I
Sbjct: 504 EYVLRDAIGREWQCGTTQVDFNLPERFGAFYIDEHSNKVAPVMVHRAICGSLERFTGILI 563

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E+F G+ PLWL+P+QA++TTITS   +YA+E+    ++  L +E D RNE INYK+REHS
Sbjct: 564 EHFAGHFPLWLAPVQAVITTITSDGDDYAREVFEACRAAGLRVEIDLRNEKINYKVREHS 623

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           + K+P +++ G KEA  R++ IRR G      + L +A+  L  E+ PPD ++
Sbjct: 624 LAKVPALLVVGKKEAETRAVSIRRLGREGQTVLPLDEALQALAAEATPPDVKR 676


>gi|220926910|ref|YP_002502212.1| threonyl-tRNA synthetase [Methylobacterium nodulans ORS 2060]
 gi|219951517|gb|ACL61909.1| threonyl-tRNA synthetase [Methylobacterium nodulans ORS 2060]
          Length = 670

 Score =  843 bits (2179), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 387/647 (59%), Positives = 495/647 (76%), Gaps = 6/647 (0%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           LTFPDG+ + +    TG  V E I++SLAK+ VA+A++G V DL D +  +  IE +   
Sbjct: 4   LTFPDGATRAYDAAVTGRAVVEGIAKSLAKRTVAMALDGTVHDLDDAITHDARIEFLDRT 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           DPR+L +IRH CAH++AEAVQS+WPE QV IGP+IE+GFYYDF +E PF+ D+ A IE +
Sbjct: 64  DPRALELIRHDCAHVLAEAVQSLWPETQVTIGPVIENGFYYDFYRETPFTPDDFAAIEAR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+EIIARD+PF K+  + +  R LF  K E++KVE++++IP  E++ +YRQGEWFDLCRG
Sbjct: 124 MREIIARDAPFTKEVWARDDVRALFADKGESFKVELVDAIPPGEDLKIYRQGEWFDLCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PH+ STG++   FKLMKVAGAYWRGDS+RPMLSRIYGTAW +Q +L  YL+ LEE+E+RD
Sbjct: 184 PHMTSTGKIGAAFKLMKVAGAYWRGDSSRPMLSRIYGTAWASQADLDAYLHRLEEAERRD 243

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHLW 305
           HR+L REMDLFH  E+G GV+FWH KGW +FQ LI+YMRR++K DY E+N PQ+LD+ LW
Sbjct: 244 HRRLGREMDLFHFQEEGPGVVFWHPKGWTLFQELIAYMRRRLKGDYREVNAPQILDKALW 303

Query: 306 QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEF 365
           + SGHWD YR NMF  K  D+     R FA+KPMNCPGHV +F HGLKSYR+LP+RLAEF
Sbjct: 304 ETSGHWDWYRENMFVTKTEDE-----RVFAIKPMNCPGHVQIFKHGLKSYRDLPLRLAEF 358

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
           G+V R EPSG+LHGLMRVR FTQDDAHVFCT++Q+  ECLKI++LI+S Y DFGF++I+V
Sbjct: 359 GAVSRYEPSGALHGLMRVRAFTQDDAHVFCTEDQLAAECLKINDLILSTYADFGFDEIVV 418

Query: 426 KLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKD 485
           KLSTRPEKRVGSDALWD AE +M  VL  I+  S  RI T +  GEGAFYGPKFEY+L+D
Sbjct: 419 KLSTRPEKRVGSDALWDHAEEVMTRVLAQIEEQSGGRIRTAINPGEGAFYGPKFEYVLRD 478

Query: 486 AIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           AIGRDWQCGT QVDFNLP RF AFYV++  +K  PVM+HRA+ GS+ERF GI+IE+F G+
Sbjct: 479 AIGRDWQCGTTQVDFNLPERFGAFYVDADGQKKTPVMVHRAICGSMERFAGILIEHFAGH 538

Query: 546 LPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPI 605
            PLWL+P+Q +V TITS A  YA+E+    ++  L  E D RNE INYK+REHS  K+P+
Sbjct: 539 FPLWLAPLQVVVATITSDADLYAREVLAAAEAAGLRAELDLRNEKINYKVREHSHAKVPV 598

Query: 606 IIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           +++ G +E  E ++ IRR GS  T+   L  A+  L  E+  PD ++
Sbjct: 599 MLVVGRREGEEGTVSIRRLGSQQTRTAPLDQALAELVAEATAPDWRR 645


>gi|91977727|ref|YP_570386.1| threonyl-tRNA synthetase [Rhodopseudomonas palustris BisB5]
 gi|91684183|gb|ABE40485.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase
           [Rhodopseudomonas palustris BisB5]
          Length = 687

 Score =  843 bits (2177), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/650 (56%), Positives = 500/650 (76%), Gaps = 2/650 (0%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           I +TFPDG  +++P   TG ++A+ IS SLAK+ V +A+NG + DL+DP+ +  +I+ + 
Sbjct: 33  ITVTFPDGKTRDYPRGTTGLEIAKGISPSLAKRTVVMALNGVLTDLADPIDDNAAIDFVA 92

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D R+L +IRH CAH++AEAVQ++WP  QV IGP IE+GFYYDF + +PF+ ++ A IE
Sbjct: 93  RDDSRALELIRHDCAHVLAEAVQALWPGTQVTIGPTIENGFYYDFFRNEPFTPEDFAAIE 152

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           KKM+EIIARD PF K+  + ++ +++F    E +KVE++++IPA +++ +Y+QG+WFDLC
Sbjct: 153 KKMREIIARDKPFTKEVWTRDQTKQVFADNGEMFKVELVDAIPADQSIKIYKQGDWFDLC 212

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG++   FKLMKVAGAYWRGDSN PML+RIYGTA+  Q++L  YL  +EE+EK
Sbjct: 213 RGPHMTSTGKIGSAFKLMKVAGAYWRGDSNNPMLTRIYGTAFAKQEDLDAYLKQIEEAEK 272

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQH 303
           RDHR+L RE+DLFH  E+G GV+FWH KGW +FQ+L++YMRR++  +Y+E+N PQ+LD+ 
Sbjct: 273 RDHRRLGRELDLFHFQEEGPGVVFWHAKGWSVFQSLVAYMRRRLAGNYDEVNAPQILDKV 332

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+ SGHWD YR NMFA + A +  +D R FALKPMNCPGHV +F HGLKSYR+LP+R+A
Sbjct: 333 LWETSGHWDWYRENMFAAQSAGENAEDKRWFALKPMNCPGHVQIFKHGLKSYRDLPLRMA 392

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE-K 422
           EFG V+R EPSG++HGLMRVRGFTQDDAHVFCT+ Q+  ECLKI++LI+S Y DFGF+ +
Sbjct: 393 EFGIVHRYEPSGAMHGLMRVRGFTQDDAHVFCTEAQLAEECLKINDLILSTYSDFGFDGE 452

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + VKLSTRP+KRVG+D +WD AE +M  VL  IK    +RI T +  GEGAFYGPKFEY+
Sbjct: 453 LTVKLSTRPDKRVGTDEMWDHAERVMATVLSEIKAQGDNRIKTEINPGEGAFYGPKFEYV 512

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+DAIGRDWQCGT QVDFNLP RF AFY+++   K  PVM+HRA+ GS+ERFIGI+IE+F
Sbjct: 513 LRDAIGRDWQCGTTQVDFNLPERFGAFYIDADGAKKAPVMVHRAICGSMERFIGILIEHF 572

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            GN PLWL+P+Q +V TITS   EYA+++    +   L ++ D RNE IN K+REHS+ K
Sbjct: 573 AGNFPLWLAPVQLVVATITSEGDEYAKKVVAAARRAGLRVDIDLRNEKINLKVREHSLAK 632

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           +P +++ G KEA   S+ +RR GS     ++  DAI  L +E+ PPD ++
Sbjct: 633 VPALLVVGRKEAETHSVSVRRLGSDGQTVMATADAIAALVEEATPPDVKR 682


>gi|86749289|ref|YP_485785.1| threonyl-tRNA synthetase [Rhodopseudomonas palustris HaA2]
 gi|86572317|gb|ABD06874.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase
           [Rhodopseudomonas palustris HaA2]
          Length = 661

 Score =  842 bits (2176), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/650 (57%), Positives = 495/650 (76%), Gaps = 2/650 (0%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           + +TFPDG  +++P   TG D+A+ IS SLAK+ VA+A+NG + DL+DP+ E  +I+ + 
Sbjct: 6   VTVTFPDGKTRDYPRGTTGLDIAKGISPSLAKRTVAMALNGVLTDLADPIEENAAIDFVA 65

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D R+L +IRH CAH++AEAVQS+WP  QV IGP IE+GFYYDF + +PF+ ++   IE
Sbjct: 66  RDDARALELIRHDCAHVLAEAVQSLWPGTQVTIGPTIENGFYYDFFRNEPFTPEDFGAIE 125

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           KKM+EII RD PF K+  S ++ +++F    E +KVE++++IPA + + +Y+QG+WFDLC
Sbjct: 126 KKMREIIQRDKPFTKEIWSRDETKKVFADNGEMFKVELVDAIPADQTIKIYKQGDWFDLC 185

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG++   FKLMKVAGAYWRGDSN PML+RIYGTA+  Q +L  YL  +EE+EK
Sbjct: 186 RGPHMTSTGKIGTAFKLMKVAGAYWRGDSNNPMLTRIYGTAFAKQDDLDAYLKQIEEAEK 245

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQH 303
           RDHRKL RE+DLFH  E+G GV+FWH KGW IFQ+L+ YMRR++  DY+E+N PQ+LD+ 
Sbjct: 246 RDHRKLGRELDLFHFQEEGPGVVFWHAKGWSIFQSLVGYMRRRLAGDYDEVNAPQILDKV 305

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+ SGHW+ YR NMFA + A +  +D R FALKPMNCPGHV +F HGLKSYR+LP+R+A
Sbjct: 306 LWETSGHWEWYRENMFAAQSAGEDAEDKRWFALKPMNCPGHVQIFKHGLKSYRDLPLRMA 365

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE-K 422
           EFG V+R EPSG++HGLMRVRGFTQDDAHVFCT+ Q+ +EC+KI++LI+S Y DFGF+ +
Sbjct: 366 EFGVVHRYEPSGAMHGLMRVRGFTQDDAHVFCTEAQLADECMKINDLIMSTYSDFGFDGE 425

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + VKLSTRP+KRVG+D +WD AE +M  VL  IK    +RI T +  GEGAFYGPKFEY+
Sbjct: 426 LTVKLSTRPDKRVGTDEMWDHAERVMATVLSEIKAQGSNRIKTEINPGEGAFYGPKFEYV 485

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+DAIGRDWQCGT QVDFNLP RF AFY+++   K  PVM+HRA+ GS+ERFIGI+IE+F
Sbjct: 486 LRDAIGRDWQCGTTQVDFNLPERFGAFYIDADGAKKAPVMVHRAICGSMERFIGILIEHF 545

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            GN PLWL+P+Q +V TITS   EYA+++    +   L ++ D RNE IN K+REHS+ K
Sbjct: 546 AGNFPLWLAPVQLVVATITSEGDEYAKQVVAAARRAGLRVDIDLRNEKINLKVREHSLAK 605

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           +P +++ G KEA   S+ +RR GS     +   +AI  L  E+ PPD ++
Sbjct: 606 VPALLVVGKKEAETHSVSVRRLGSDGQTVMPTAEAIAALVDEATPPDVRR 655


>gi|217979642|ref|YP_002363789.1| threonyl-tRNA synthetase [Methylocella silvestris BL2]
 gi|217505018|gb|ACK52427.1| threonyl-tRNA synthetase [Methylocella silvestris BL2]
          Length = 648

 Score =  841 bits (2173), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/650 (58%), Positives = 501/650 (77%), Gaps = 10/650 (1%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           I +TFPDG+ + FP  A+G D+A++IS SLAK+ VA+ ++G + DL+DPVR G+ +E I 
Sbjct: 2   IDVTFPDGATRQFPAGASGFDIAKAISPSLAKRTVAMIVDGSLSDLADPVRHGARVEFIG 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            ED R+L +IRH  AH++AEAVQ+++P  QV IGP+IE+GFYYDF + +PF+ D+ A +E
Sbjct: 62  REDKRALELIRHDAAHVLAEAVQTLYPGTQVTIGPVIENGFYYDFFRNEPFTPDDFAAVE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           KKM EIIARD PF K+  S ++AR  FE++ EA+KVE+++SIP  E++ +YRQG+W DLC
Sbjct: 122 KKMAEIIARDRPFTKEVWSRDQARSFFETRGEAFKVELVDSIPGDEDLKIYRQGDWLDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG++   FKLMKVAGAYWRGDSNRPML RIY TA+ T++EL  YL  +EE+EK
Sbjct: 182 RGPHMTSTGKIGDAFKLMKVAGAYWRGDSNRPMLQRIYATAFATREELAAYLRQIEEAEK 241

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQ 302
           RDHR+L REMDLFH  E+G G IFWH KGW +FQTLI+YMRR+++ D Y E+NTPQVLD+
Sbjct: 242 RDHRRLGREMDLFHFQEEGPGAIFWHPKGWTLFQTLIAYMRRRMEADGYLEVNTPQVLDR 301

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW ++R +MF  K  D+     R FALKPMNCPGHV +F +GLKSYR+LP+++
Sbjct: 302 ALWETSGHWQTFREHMFLTKTEDE-----RIFALKPMNCPGHVQIFKNGLKSYRDLPLKI 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG V+R EPSG+LHG+MRVR FTQDDAH+FCT++Q+  E LK+++LI+SIY+DFGF+ 
Sbjct: 357 GEFGVVHRYEPSGALHGVMRVRAFTQDDAHIFCTEDQIMAESLKVNDLILSIYQDFGFDD 416

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           +++KLSTRPEKRVGS+  WD AE  +  V+D +         TGV  GEGAFYGPK EY 
Sbjct: 417 VIIKLSTRPEKRVGSEEAWDKAEAALGRVVDMLAAGGA---KTGVNPGEGAFYGPKLEYT 473

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+DAIGR+WQCGT QVDFN+P RF AFY+++ S+K  PVMIHRA+FGS+ERF GI+IE+F
Sbjct: 474 LRDAIGREWQCGTTQVDFNMPGRFGAFYIDADSDKKTPVMIHRAIFGSLERFTGILIEHF 533

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            GNLPLWL+P+Q IV TIT  A +YA E+A   + + L +E D RNE I+YKIREHS+ K
Sbjct: 534 SGNLPLWLAPVQVIVATITQDADDYALEVAAAARKYGLRVEADLRNEKISYKIREHSLAK 593

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
            P++I+ G +E  ER++ IRR G++ T  +SL  A+  L  E+ PPD ++
Sbjct: 594 TPVLIVVGKREGLERTVSIRRLGASDTTSLSLETALERLADEATPPDLRR 643


>gi|90424612|ref|YP_532982.1| threonyl-tRNA synthetase [Rhodopseudomonas palustris BisB18]
 gi|90106626|gb|ABD88663.1| threonyl-tRNA synthetase [Rhodopseudomonas palustris BisB18]
          Length = 679

 Score =  837 bits (2161), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/647 (58%), Positives = 493/647 (76%), Gaps = 1/647 (0%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +TFPDG  + +P   TG D+A+SI+ SLAK+ VA+A++G + DL+DP+  +  I+ I  +
Sbjct: 28  VTFPDGKSREYPRGTTGLDIAKSIAPSLAKRTVAMAVDGVLTDLADPIAHDVKIDFIARD 87

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D R+L +IRH CAH++AEAVQ++WP  QV IGP IE+GFYYDF + +PF+ ++ A IEKK
Sbjct: 88  DARALELIRHDCAHVLAEAVQTLWPGTQVTIGPTIENGFYYDFFRNEPFTPEDFAAIEKK 147

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+EII RD PF K     EK +++F  K E +KVE++++IP  + + +Y QG+WFDLCRG
Sbjct: 148 MREIIGRDKPFTKDVWDREKTKQVFRDKGETFKVELVDAIPGNDLIKIYYQGDWFDLCRG 207

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PH+ STG++   FKLMKVAGAYWRGDSN PML+RIYGTA+  Q+EL  YL  +EE+EKRD
Sbjct: 208 PHMTSTGKIGTAFKLMKVAGAYWRGDSNNPMLTRIYGTAFAKQEELDAYLKQIEEAEKRD 267

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHLW 305
           HRKL RE+DLFH  E+G GV+FWH KGW IFQ LI+YMRR++  DY+E+N PQ+LD+ LW
Sbjct: 268 HRKLGRELDLFHFQEEGPGVVFWHAKGWTIFQALIAYMRRRLSGDYDEVNAPQILDKALW 327

Query: 306 QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEF 365
           + SGHW+ YR NMFA + A D  +D R FALKPMNCPGHV +F HGLKSYR+LP+R+AEF
Sbjct: 328 EISGHWEWYRENMFAAQSAGDEAEDKRWFALKPMNCPGHVQIFKHGLKSYRDLPLRMAEF 387

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
           G V+R EPSG++HGLMRVRGFTQDDAHVFCT+ Q+  ECLKI+ LI+S Y DFGF  I+V
Sbjct: 388 GIVHRYEPSGAMHGLMRVRGFTQDDAHVFCTEAQLAEECLKINELILSTYSDFGFGDIVV 447

Query: 426 KLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKD 485
           KLSTRPEKRVG+D +WD AE +M  VL  I+ +S  RI T +  GEGAFYGPKFEY+L+D
Sbjct: 448 KLSTRPEKRVGTDEMWDHAERVMATVLAEIEAASGGRIKTSINPGEGAFYGPKFEYVLRD 507

Query: 486 AIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           AIGRDWQCGT QVDFNLP RF AFY+++   K  PVM+HRA+ GS+ERFIGI+IE+F G+
Sbjct: 508 AIGRDWQCGTTQVDFNLPERFGAFYIDADGSKKAPVMVHRAICGSMERFIGILIEHFAGS 567

Query: 546 LPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPI 605
            PLWL+P+Q +VTTITS   +YA+ +A   +   L +E D RNE INYK+REHS+ KIP 
Sbjct: 568 FPLWLAPVQVVVTTITSEGDDYAKVVAAAARRAGLRVELDLRNEKINYKVREHSLAKIPA 627

Query: 606 IIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           +++ G KEA    + +RR GS     +   +AI  L +E++PPD ++
Sbjct: 628 MLVVGKKEAESHQVSVRRLGSEGQTVLPTNEAIAALVEEAVPPDVKR 674


>gi|304391869|ref|ZP_07373811.1| threonyl-tRNA synthetase [Ahrensia sp. R2A130]
 gi|303296098|gb|EFL90456.1| threonyl-tRNA synthetase [Ahrensia sp. R2A130]
          Length = 663

 Score =  830 bits (2145), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/650 (57%), Positives = 499/650 (76%), Gaps = 7/650 (1%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           +++ FPDG+++++    TG DVAE IS+SL+KK++A  ++GK+ DLS P+   G +E++ 
Sbjct: 6   LEIRFPDGNVRHYDPGTTGRDVAEGISKSLSKKSMAYMLDGKLTDLSAPLAASGDLELVL 65

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D R+L +IRH CAH++AEAVQ IWP+ +V IGP+IE+GFYYDFD+E PF+ ++L +IE
Sbjct: 66  RDDDRALELIRHDCAHVLAEAVQDIWPDTKVTIGPVIENGFYYDFDRETPFTPEDLERIE 125

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           KKM+EII R+ PF  +  + ++A+  FE   E YK E++++IP  +N+ +Y+QGEW DLC
Sbjct: 126 KKMREIIQRNDPFTHEVWTRDQAKAHFEKIGETYKAELIDAIPEGDNLNIYKQGEWMDLC 185

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH  STG++   FKLM VAGAYWRGDS+  MLSRIYGTAW  +++L QYL+ LEE++K
Sbjct: 186 LGPHGPSTGKIGNAFKLMSVAGAYWRGDSDNQMLSRIYGTAWADEKQLKQYLHMLEEAQK 245

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL REMDLFH  E+G GV+FWH KGWK+FQ L+SYMRR+I++  Y+E+N PQ+LD+
Sbjct: 246 RDHRKLGREMDLFHFQEEGPGVVFWHAKGWKVFQHLVSYMRRRIEEHGYDEVNAPQILDK 305

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW  YR NMF     D+     R FA+KPMNCPGHV +F +GL+SYRELPV++
Sbjct: 306 ALWETSGHWGWYRENMFTTVTEDE-----RQFAIKPMNCPGHVQIFKNGLRSYRELPVKM 360

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFG+V+R EPSG+LHGLMRVRGFTQDDAHVFCT EQ+  ECL+I++LI+S Y DFGF  
Sbjct: 361 AEFGNVHRYEPSGALHGLMRVRGFTQDDAHVFCTPEQLEEECLRINDLILSTYSDFGFGD 420

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+VKLSTRPEKRVGS+  WD +E IM  VL+ I   S  RI T +  GEGAFYGPKFEY+
Sbjct: 421 IVVKLSTRPEKRVGSEEGWDRSEEIMGKVLEKIAADSDGRIKTELNPGEGAFYGPKFEYV 480

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+DAIGRDWQCGT QVDF LP RF AFY++  S+K  PVM+HRA+ GS+ERFIGI+IE+F
Sbjct: 481 LRDAIGRDWQCGTTQVDFALPERFGAFYIDKDSQKQEPVMVHRAICGSMERFIGILIEHF 540

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G+ PLW+SP+Q +V TITS A  Y + +A  L+   L +ETDFRNE INYK+REHS+ K
Sbjct: 541 AGHFPLWISPLQVVVATITSEADPYGEIVAEELREAGLRVETDFRNEKINYKVREHSLAK 600

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           +P+II  G +EA ER++ +RR GS     ++L +A+  L+ E++ PD ++
Sbjct: 601 VPVIIAVGGREAEERTVSVRRLGSKHQTSMTLDEAVASLSDEAIAPDIRR 650


>gi|115524346|ref|YP_781257.1| threonyl-tRNA synthetase [Rhodopseudomonas palustris BisA53]
 gi|115518293|gb|ABJ06277.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase
           [Rhodopseudomonas palustris BisA53]
          Length = 679

 Score =  825 bits (2130), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/649 (58%), Positives = 493/649 (75%), Gaps = 1/649 (0%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           I +TFPDG  + +P   TG ++A+ IS SLAK+ V +A++G + DL+DP+ + S I+ + 
Sbjct: 27  IIVTFPDGKTREYPRGTTGLEIAKGISPSLAKRTVVMALDGVLTDLADPIEQDSKIDFVA 86

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D R+L +IRH  AH++AEAVQ++WP  QV IGP IE+GFYYDF + +PF+ ++ A IE
Sbjct: 87  RDDARALELIRHDAAHVLAEAVQTLWPGTQVTIGPTIENGFYYDFFRNEPFTPEDFAAIE 146

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           KKM+EIIARD PF K     EK +++F  K E +KVE++++IP  + + +Y QGEWFDLC
Sbjct: 147 KKMREIIARDKPFTKDVWDREKTKQVFRDKGELFKVELVDAIPGNDPIKIYNQGEWFDLC 206

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG++   FKLMKVAGAYWRGDSN PML+RIYGTA+  Q++L  YL  +EE+EK
Sbjct: 207 RGPHMTSTGKIGNAFKLMKVAGAYWRGDSNNPMLTRIYGTAFAKQEDLDAYLKQIEEAEK 266

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQH 303
           RDHRKL RE+DLFH  E+G GV+FWH KGW IFQ LI+YMRR++  DY+E+N PQ+LD+ 
Sbjct: 267 RDHRKLGRELDLFHFQEEGPGVVFWHAKGWTIFQALIAYMRRRLAGDYDEVNAPQILDKV 326

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+ SGHWD YR NMFA + A D  +D R FALKPMNCPGH+ ++ HGLKSYR+LP+R+A
Sbjct: 327 LWETSGHWDWYRENMFAAQSAGDEAEDKRWFALKPMNCPGHIQIYKHGLKSYRDLPLRMA 386

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFG V+R EPSG++HGLMRVRGFTQDDAHVFCT+ Q+  ECLKI+ LI+S Y DFGF  I
Sbjct: 387 EFGIVHRYEPSGAMHGLMRVRGFTQDDAHVFCTELQLAEECLKINELILSTYSDFGFGDI 446

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRP+KRVG+D  WD AE +M  VL  I+ +S  RI T +  GEGAFYGPKFEY+L
Sbjct: 447 VVKLSTRPDKRVGTDESWDHAERVMATVLAEIEAASGGRIKTAINPGEGAFYGPKFEYVL 506

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +DAIGRDWQCGT QVDFNLP RF AFY+++   K  P+M+HRA+ GS+ERF GI+IE+F 
Sbjct: 507 RDAIGRDWQCGTTQVDFNLPERFGAFYIDADGAKKTPIMVHRAICGSMERFTGILIEHFA 566

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G+ PLWLSP+Q +VTTITS   +YA+ +A   +   L +E D RNE INYK+REHS+ KI
Sbjct: 567 GHFPLWLSPVQVMVTTITSEGDDYAKVVAAAARKAGLRVEIDLRNEKINYKVREHSLAKI 626

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           P +++ G KEA   S+ +RR GS     + L DA+  L +E++PPD ++
Sbjct: 627 PAMLVVGKKEAETHSVSVRRLGSDGQTVLPLADALAALVEEAVPPDVKR 675


>gi|182679322|ref|YP_001833468.1| threonyl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC
           9039]
 gi|182635205|gb|ACB95979.1| threonyl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC
           9039]
          Length = 644

 Score =  823 bits (2126), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/649 (58%), Positives = 490/649 (75%), Gaps = 11/649 (1%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I +TFPDG+ + F    +G D+A+SIS SLAKKA+A+++NG + DL+D V R+  IE IT
Sbjct: 2   ISVTFPDGAARQFEPGVSGVDIAKSISPSLAKKALAMSLNGTLSDLADKVDRDARIEFIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +DPR L +IRH  AH+MAEAVQ+++P  QV IGP+IE+GFYYDF + +PF+  + A IE
Sbjct: 62  RDDPRGLDLIRHDAAHVMAEAVQTLYPGTQVTIGPVIENGFYYDFYRNEPFTPADFAAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           KKM EIIARD PF K+  S ++A+  FE+  EA+KVE+++SIP  E++ +YRQGEW DLC
Sbjct: 122 KKMGEIIARDKPFTKEVWSRDEAKAWFETHGEAFKVELVDSIPGNEDLKIYRQGEWLDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG++   FKLMKVAGAYWRGD  +PML RIY TA+  +QEL  YL  LEE+EK
Sbjct: 182 RGPHLPSTGKIGTAFKLMKVAGAYWRGDHTKPMLQRIYATAFANKQELDAYLKQLEEAEK 241

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHR+L REMDLFH  E+G G +FWH KGW +FQTLISYMRR+ ++  Y E+NTPQVLD+
Sbjct: 242 RDHRRLGREMDLFHFQEEGPGTVFWHPKGWTLFQTLISYMRRRQQEAGYVEVNTPQVLDR 301

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW +YR NMF       T +D R FALKPMNCPGHV +F +GLKSYR+LP+++
Sbjct: 302 ALWETSGHWSTYRENMFIT-----TTEDERVFALKPMNCPGHVQIFKNGLKSYRDLPLKI 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFG V+R EPSG+LHG+MRVR FTQDDAH+FCT++Q+ +E LKI++LI+SIY+DFGFE 
Sbjct: 357 AEFGVVHRYEPSGALHGVMRVRAFTQDDAHIFCTEDQIMDEVLKINDLILSIYRDFGFED 416

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I++KLSTRPEKRVGSD  WD AE  +  VL+ + N    +  TG+  GEGAFYGPK EY 
Sbjct: 417 IVIKLSTRPEKRVGSDEAWDKAEAALTRVLEKLGN----QFKTGINPGEGAFYGPKLEYT 472

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+DAIGR+WQCGT QVDFNLP RF AFY+    +K  PVMIHRA+FGS+ERF GI+IE++
Sbjct: 473 LRDAIGREWQCGTTQVDFNLPGRFGAFYIAPEGDKTVPVMIHRAMFGSLERFTGILIEHY 532

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G+LPLWLSP+Q +V TIT    +YA E+    +   L ++ D RNE I YK+REHS+ K
Sbjct: 533 AGHLPLWLSPLQIVVATITQEGDDYAYEVMAAARKRGLRVDGDLRNEKITYKVREHSLAK 592

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           +P++ + G KEA+ER++ IRR GS     + L  A+ +L  E+ PPD +
Sbjct: 593 VPVLFVLGKKEAAERTVSIRRLGSNDQISLGLEQALELLAAEATPPDLR 641


>gi|300023294|ref|YP_003755905.1| threonyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888]
 gi|299525115|gb|ADJ23584.1| threonyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888]
          Length = 650

 Score =  821 bits (2121), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/651 (56%), Positives = 492/651 (75%), Gaps = 7/651 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
           +D+ +TFPDG  +      TG ++A+SIS SLAK+ VA+ ++G + DL+DP+ ++ SI  
Sbjct: 2   TDVTITFPDGKQRQVKAGTTGLEIAKSISPSLAKRTVAMQLDGVLSDLADPINKDVSINF 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +   DP +L +IRH  AH+MAEAVQS+WP  QV IGP+I++GF+YDF K+QPF  +++ +
Sbjct: 62  VARTDPAALELIRHDAAHVMAEAVQSLWPGTQVTIGPVIDNGFFYDFAKQQPFEPEDIPK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEKKM EIIA+++ F K++ S + A++ F  K E +K+E++++IPA E++ +Y+QGEW D
Sbjct: 122 IEKKMGEIIAKNAAFTKEFWSRDDAKKFFRDKGEVFKIELVDAIPAGEDLKIYKQGEWLD 181

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ STGQ+ K FKLMK AGAYWRGDSN P L RIYGTA+ T+ EL  YL+ LEE+
Sbjct: 182 LCRGPHMTSTGQIGKAFKLMKFAGAYWRGDSNNPQLQRIYGTAFATEDELKAYLHQLEEA 241

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVL 300
           EKRDHRKL REMDLFH  E+  G +FWH KGW +FQTLI+YMRR+  +  YEE+N+P ++
Sbjct: 242 EKRDHRKLGREMDLFHFQEEAPGSVFWHAKGWTLFQTLIAYMRRQQQRAGYEEVNSPDMM 301

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++H W+ SGHW++Y  NMF        + D R F  KPMNCPGHV ++ +GLKSYR+LP 
Sbjct: 302 EKHFWELSGHWENYGENMFTT-----VLPDERVFCCKPMNCPGHVQIYKNGLKSYRDLPY 356

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AEFG V+R EPSG+LHG++RVR FTQDDAH+F T++Q+  ECLKI++L++SIYKDFGF
Sbjct: 357 RIAEFGKVHRYEPSGALHGMLRVRHFTQDDAHIFLTEDQIMEECLKINDLMLSIYKDFGF 416

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           E+I++KLSTRPEKRVG+D LWD AE  +  VLD +K  S   I T +  GEGAFYGPK E
Sbjct: 417 EEIVIKLSTRPEKRVGADELWDKAEKALGDVLDEVKRRSNGLIKTEIQPGEGAFYGPKLE 476

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           Y+LKDAIGRDWQCGT QVDFNL  R  AFY++ HSEK  PVM+HRA+FGS+ERF GI+IE
Sbjct: 477 YVLKDAIGRDWQCGTTQVDFNLAGRLGAFYIDEHSEKKTPVMVHRAMFGSLERFTGILIE 536

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           NF G+ PLWL+P+Q +V  I S A +YA E+A   K+  L +ETD RNE INYK+REHS+
Sbjct: 537 NFAGHFPLWLAPLQIVVAPIVSDANDYANEVAQKAKALGLRVETDLRNEKINYKVREHSL 596

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
            K+P++++ G +EA ER + +RR GS     +SL DA+  L  E++PPD +
Sbjct: 597 AKVPVLLVVGKREAEERKVSVRRLGSQDQTVMSLDDALKSLAAEAIPPDLR 647


>gi|296446450|ref|ZP_06888394.1| threonyl-tRNA synthetase [Methylosinus trichosporium OB3b]
 gi|296256085|gb|EFH03168.1| threonyl-tRNA synthetase [Methylosinus trichosporium OB3b]
          Length = 643

 Score =  808 bits (2087), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/650 (57%), Positives = 496/650 (76%), Gaps = 10/650 (1%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I +TFPDG+ + F    +G D+A+SIS SLAK+ VA+A++G++ DL+DP+ R+  IE + 
Sbjct: 2   IAVTFPDGASRQFEPGVSGLDIAKSISPSLAKRTVAMALDGELRDLADPIDRDAKIEFVG 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            EDPR+L +IRH CAH++AEAVQ ++P  QV IGP+IE+GFYYDF + +PF+ D+L  IE
Sbjct: 62  REDPRALELIRHDCAHLLAEAVQELFPGTQVTIGPVIENGFYYDFYRSEPFTPDDLPAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           KKM+EI+ARD+   K+  + ++A+  F ++ EA+K E++ESIP  E++ +YRQG W DLC
Sbjct: 122 KKMREIVARDAAITKEVWTRDQAKTFFTARGEAFKRELIESIPGGEDLKIYRQGHWLDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ S G+V   FKLMKVAGAYWRGD N PMLSRIYGTA+  Q+EL  YL+ LEE+E+
Sbjct: 182 RGPHLPSIGKVGTAFKLMKVAGAYWRGDHNNPMLSRIYGTAFAKQEELDAYLHRLEEAER 241

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQ 302
           RDHR+L REMDLFH  E+G G IFWH KGW +FQ+L+SYMRR+ K   Y+E+NTPQVLD+
Sbjct: 242 RDHRRLGREMDLFHFQEEGPGTIFWHEKGWALFQSLVSYMRRRQKAAGYKEVNTPQVLDR 301

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW +YR NMF  K  D+     R FALKPMNCPGHV +F +GLKSYR+LPV++
Sbjct: 302 ALWETSGHWQTYRENMFLTKTEDE-----RIFALKPMNCPGHVQIFKNGLKSYRDLPVKI 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFG V+R EPSG+LHG+MRVR FTQDDAH+FC ++Q+  E LKI++LI++IY+DFGF+ 
Sbjct: 357 AEFGIVHRYEPSGALHGMMRVRAFTQDDAHIFCNEDQIMEEALKINDLILTIYRDFGFDD 416

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           ++VKLSTRPEK VGSD  W  AE  +  VLD +K      + TGV  GEGAFYGPK EY 
Sbjct: 417 VVVKLSTRPEKHVGSDEAWAKAEAALYKVLDELKARG---LKTGVNPGEGAFYGPKLEYT 473

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+DAIGR+WQCGT QVDFNLP RF AFY+ S SEK  PVMIHRA+FGS+ERF GI+IE++
Sbjct: 474 LRDAIGREWQCGTTQVDFNLPGRFGAFYIGSDSEKKTPVMIHRAMFGSLERFTGILIEHY 533

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G+LPLWLSP+Q +V TIT  A +YA E+A   ++  L+++ D RNE I YK+REHS+ K
Sbjct: 534 AGHLPLWLSPLQIVVCTITQDADDYAYEVAAEARNVGLAVDLDLRNEKITYKVREHSLAK 593

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           +P++++ G KEA+E ++ IRR GS      +L DA+  L +E+ PPD ++
Sbjct: 594 VPVLLVVGKKEAAEHTVSIRRLGSQAQSSATLADALAALAEEATPPDVKE 643


>gi|323137534|ref|ZP_08072611.1| threonyl-tRNA synthetase [Methylocystis sp. ATCC 49242]
 gi|322397160|gb|EFX99684.1| threonyl-tRNA synthetase [Methylocystis sp. ATCC 49242]
          Length = 643

 Score =  806 bits (2081), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/649 (56%), Positives = 494/649 (76%), Gaps = 10/649 (1%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           + +TFPDG+ + F    TG D+A+SIS SLAK+ VA+ ++G++ DL  PV++   IE ++
Sbjct: 2   VAVTFPDGASRQFEAGVTGFDIAKSISPSLAKRTVAMTLDGELVDLMKPVKQDAKIEFVS 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            EDPR+L +IRH  AH++AEAVQ ++P  QV IGP+IE+GFYYDF + +PF+ ++L  IE
Sbjct: 62  REDPRALELIRHDAAHVLAEAVQELYPGTQVTIGPVIENGFYYDFHRAEPFTLEDLPAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           KKM+EI+ARD+P +++    + AR  F +K E +K E+++SI + E +++Y+QG W DLC
Sbjct: 122 KKMREIVARDAPIVREEWDRDHARTWFIAKGETFKGELIDSIKSDEPLSVYKQGHWLDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ S G++   FKLMKVAGAYWRGDS +PMLSRIYGTAW TQ+EL  YL+ LEE+E+
Sbjct: 182 RGPHLPSVGKIGTAFKLMKVAGAYWRGDSTKPMLSRIYGTAWATQEELDAYLHRLEEAER 241

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQ 302
           RDHR+L REMDLFH  E+G G IFWH KGW +FQTL+SYMRR+ K   Y E+NTPQVLD+
Sbjct: 242 RDHRRLGREMDLFHFQEEGPGAIFWHPKGWTLFQTLVSYMRRRQKAAGYTEVNTPQVLDR 301

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW +YR NMF  K  D+     R FALKPMNCPGHV +F +GLKSYR+LPV++
Sbjct: 302 ALWETSGHWQTYRENMFVTKTEDE-----RIFALKPMNCPGHVQIFKNGLKSYRDLPVKI 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFG V+R EPSG+LHG+MRVR FTQDDAH+FC+++Q+ +E LKI++LI++IY+DFGF+ 
Sbjct: 357 AEFGVVHRYEPSGALHGMMRVRAFTQDDAHIFCSEDQIMDEALKINDLILTIYRDFGFDD 416

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           ++VKLSTRPEKRVGSD  WD AE  +  VLD +       + T +  GEGAFYGPK EY 
Sbjct: 417 VVVKLSTRPEKRVGSDEAWDKAEAALGKVLDELARRG---LKTSIQEGEGAFYGPKLEYT 473

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+DAIGR+WQCGT QVDFNLP RF AFY+ + S+K  PVMIHRA+FGS+ERF GI+IE+F
Sbjct: 474 LRDAIGREWQCGTTQVDFNLPVRFGAFYIGADSDKKIPVMIHRAMFGSLERFTGILIEHF 533

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G+LPLWLSP+Q ++ TIT  A +YA E+A   +   L+++ D RNE I YK+REHS+ K
Sbjct: 534 AGHLPLWLSPLQIVICTITQEADDYAYEVAAAARKLGLNVDIDARNEKITYKVREHSLAK 593

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           +P++++ G KEA+ER+I IRR GS    ++ + +A+  L  E+ PPD +
Sbjct: 594 VPVLLVAGKKEAAERTISIRRLGSQQQTQMGIDEALAQLAAEATPPDVR 642


>gi|312113796|ref|YP_004011392.1| threonyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100]
 gi|311218925|gb|ADP70293.1| threonyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100]
          Length = 640

 Score =  784 bits (2024), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/650 (54%), Positives = 489/650 (75%), Gaps = 13/650 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I LTFPDGS ++F    TG+++A SIS+SLAKKAVAV ++G++ DL+DP+  +  + I+T
Sbjct: 2   ITLTFPDGSARSFDAAITGAELAASISKSLAKKAVAVVLDGQLADLADPIATDARVRIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +DP +L +IRH  AH+MAEAVQ ++P  QV IGP+IE+GFYYDF + + F+ D+LA+IE
Sbjct: 62  RDDPEALELIRHDAAHVMAEAVQELFPGTQVTIGPVIENGFYYDFYRAESFTPDDLAKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           +KM+EIIA D PF+K+  S  KA++ F ++ E +KVE++++IP  +++ +YRQG+W DLC
Sbjct: 122 EKMREIIAADKPFVKEVWSRAKAQDFFAAEGEGFKVELIDAIPEGQDLKIYRQGDWLDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG+V K FKLM++AG+YWRGDSNR  L RIYGTAW + ++L  YL  LEE+EK
Sbjct: 182 RGPHLPSTGKVGKAFKLMRLAGSYWRGDSNREQLQRIYGTAWASDEQLKSYLTMLEEAEK 241

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQ 302
           RDHR+L REMDLFH+ E+  G +FWH KGW +FQ LI++MRR+     + E+N+P ++++
Sbjct: 242 RDHRRLGREMDLFHLQEEAPGSVFWHPKGWTVFQALIAFMRRRQHASGHVEVNSPDMMER 301

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+QSGHW+ +  NMF  +  D+     R F  KPMNCPGH+ +F +GLKSYR+LP+R+
Sbjct: 302 KLWEQSGHWEKFGENMFVTETPDE-----RVFCCKPMNCPGHIQIFKNGLKSYRDLPLRI 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFG V+R EPSG+LHG+MRVR FTQDDAH+FCT EQ+  EC+ +++L++SIY+DFGFE 
Sbjct: 357 AEFGKVHRYEPSGALHGIMRVRHFTQDDAHIFCTPEQITEECVHLNSLLLSIYRDFGFED 416

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           +++KLSTRPEKRVGSD +WD AE  +K  ++         +N     GEGAFYGPK EY 
Sbjct: 417 VVIKLSTRPEKRVGSDEVWDKAEAALKAAVEAAGEPYT--LNP----GEGAFYGPKLEYT 470

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+DAIGR+WQCGTIQ+DFNLP R  AFY+     K  PVMIHRA+FGS+ERFIGI+IEN+
Sbjct: 471 LRDAIGREWQCGTIQLDFNLPVRLGAFYIGEDGAKHTPVMIHRALFGSLERFIGILIENY 530

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G+LPLWLSP+Q +V TI S A  YA E+   L +  +  ETD RNE INYK+REHS+ K
Sbjct: 531 AGHLPLWLSPVQTMVATIVSDADAYAGEVEAALVAAGVRAETDLRNEKINYKVREHSLAK 590

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           +P++ + G +EA ER++ +RR GS   + +SL +AI  +  E++PPD ++
Sbjct: 591 VPVMFVVGKREAEERTVSVRRLGSQAQETLSLDEAIARIATEAVPPDLRR 640


>gi|58039289|ref|YP_191253.1| threonyl-tRNA synthetase [Gluconobacter oxydans 621H]
 gi|73919795|sp|Q5FSP9|SYT_GLUOX RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|58001703|gb|AAW60597.1| Threonyl-tRNA synthetase [Gluconobacter oxydans 621H]
          Length = 645

 Score =  744 bits (1922), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 335/654 (51%), Positives = 458/654 (70%), Gaps = 15/654 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP+   +T PDGS++ F    TG+ +A SI   LAK A+A+ ++GK  D+   +  + S+
Sbjct: 1   MPA---ITLPDGSVRTFDGTVTGTTIAASIGPGLAKAAMAMEVDGKPVDIGTEISSDASV 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           + IT +D  +L +IRH  AH++AEAVQS+WPE QV IGP I+DGFYYDF +E+PF+ ++ 
Sbjct: 58  KFITRKDEDALEMIRHDAAHVLAEAVQSLWPETQVTIGPSIKDGFYYDFSREKPFTPEDF 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IE KM+EI+A ++PF+++    + A   FE K E +K ++++ +P  E +++YRQGEW
Sbjct: 118 PAIEAKMREIVAANTPFVREVWDRDDAIRFFEEKGEDFKAQLIQDLPEDEQISIYRQGEW 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPH+R+TG V   FKLM+VAGAYWRGD   PML+RIYGTAW  ++EL  +L  LE
Sbjct: 178 LDLCRGPHLRTTGDVGTAFKLMRVAGAYWRGDHRNPMLTRIYGTAWRDKKELDAHLLRLE 237

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+EKRDHR++ REMDLFHI E+  G IFWHRKGW+++  L  YMRR + +++YEE+ TPQ
Sbjct: 238 EAEKRDHRRIGREMDLFHIQEEAVGQIFWHRKGWRLYTVLQDYMRRAQERNNYEEVRTPQ 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D+ LW+ SGHWD YR NMF     D+     +T ALKPMNCP HV +F HGL+SYREL
Sbjct: 298 LVDRALWEASGHWDKYRENMFIATVEDED----KTLALKPMNCPCHVQIFRHGLRSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG+ +R EPSG+LHG+MRVRGFTQDDAH+FCT +Q+ +E  K   ++  +Y D 
Sbjct: 354 PLRMAEFGACHRYEPSGALHGIMRVRGFTQDDAHIFCTDDQIADETAKFVKMLAEVYSDL 413

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+   VK S RPE R GSD +WD AE  +K   +         +      GEGAFYGPK
Sbjct: 414 GFDTFRVKFSDRPETRAGSDEVWDRAEGSLKKACEIAG------VEYEYNPGEGAFYGPK 467

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E++L DAIGRDWQCGT+QVD+ LP R +A Y+   S +  PVM+HRA+ GS ERFIGI+
Sbjct: 468 LEFVLTDAIGRDWQCGTLQVDYVLPERLDASYIGEDSNRHRPVMLHRAILGSFERFIGIL 527

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE + G  PLWL+P Q +V +I S A +YA E+A  LK+  L +ETD R++ IN KIREH
Sbjct: 528 IEQYAGKFPLWLAPTQVVVASIVSDAADYANEVAATLKAAGLQVETDTRSDKINAKIREH 587

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           S+ ++P+I++ G +EA ER + +RR G    + +SL DA+  L KE+  PD  +
Sbjct: 588 SLARVPVILVVGRREAEERKVAMRRLGGAAQEILSLDDAVAALAKEAQAPDIAR 641


>gi|329115645|ref|ZP_08244367.1| Threonyl-tRNA synthetase [Acetobacter pomorum DM001]
 gi|326695073|gb|EGE46792.1| Threonyl-tRNA synthetase [Acetobacter pomorum DM001]
          Length = 645

 Score =  740 bits (1911), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/654 (50%), Positives = 465/654 (71%), Gaps = 15/654 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI- 59
           MP+   +T PDGS+++F    TG+ VAE+I   LAK A+A+ ++GK+CD+   +++ ++ 
Sbjct: 3   MPA---ITLPDGSVRSFDGPVTGTTVAEAIGPGLAKAALAMEVDGKLCDIRQTIQKDAVL 59

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
             IT +DP SL +IRH  AH++AEAVQ+++P  QV IGP IE+GFYYDF + +PFS ++ 
Sbjct: 60  RFITRKDPESLELIRHDAAHVLAEAVQALYPGTQVTIGPSIENGFYYDFYRSEPFSPEDF 119

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A IE KM+EI+A+  PF+++    + A + FE + E +K E++  +P  E +++YRQGEW
Sbjct: 120 AAIEAKMREIVAKAEPFVREVWKRDDAIQFFEDRGEKFKAELIRDLPEDEEISIYRQGEW 179

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPH+R+T  V   FKLMKVAGAYWRGD   PML+R+YGTAW  Q+EL  +L+ LE
Sbjct: 180 LDLCRGPHLRTTKDVGNAFKLMKVAGAYWRGDHRNPMLTRVYGTAWRDQKELDAHLHQLE 239

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+EKRDHR++ +EM LFH  E+  G +FWH KGW+++  L  YMRR + +  Y+E+ TPQ
Sbjct: 240 EAEKRDHRRIGKEMGLFHFQEEAVGQVFWHAKGWRLYTALQDYMRRAQTRHGYQEVRTPQ 299

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D+ LW+ SGHWD YR +MF     D+     +T ALKPMNCP HV +F HGL+SYREL
Sbjct: 300 LVDRALWEASGHWDKYRHHMFIATVEDEN----KTLALKPMNCPCHVQIFRHGLRSYREL 355

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG+ +R EPSG+LHGLMRVRGFTQDDAH+FCT++Q+ +E ++   ++  +Y+D 
Sbjct: 356 PLRMAEFGACHRYEPSGALHGLMRVRGFTQDDAHIFCTEDQIADETVRFVKMLHDVYQDL 415

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE + VK + RPE+R GSD +WD AEN +K    T+     +        GEGAFYGPK
Sbjct: 416 GFEHVRVKFADRPEQRAGSDEVWDKAENALKEAC-TVAGVEYEHNP-----GEGAFYGPK 469

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E++L+DAIGRDWQCGT+QVD  LP R +A Y+   S +  PVM+HRA+ GS ERF+GI+
Sbjct: 470 LEFVLRDAIGRDWQCGTLQVDLVLPERLDASYIGEDSGRHRPVMLHRAILGSFERFLGIL 529

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE   G  PLWL+P+Q +V +I S A  YA+E+A  L+   L++E D RN+ IN K+REH
Sbjct: 530 IEQHAGRFPLWLAPVQVVVASIVSDAAPYAEEVAAALREAGLAVEADVRNDKINAKVREH 589

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           S+ ++P+I++ G +EA ER++ +RR G+   + +SL DA+  L  E+ PPD +K
Sbjct: 590 SVARVPVILVVGRREAEERTVAMRRLGTQAQETLSLNDAVARLKNEATPPDLRK 643


>gi|258543038|ref|YP_003188471.1| threonyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01]
 gi|256634116|dbj|BAI00092.1| threonyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01]
 gi|256637176|dbj|BAI03145.1| threonyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-03]
 gi|256640228|dbj|BAI06190.1| threonyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-07]
 gi|256643285|dbj|BAI09240.1| threonyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-22]
 gi|256646340|dbj|BAI12288.1| threonyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-26]
 gi|256649393|dbj|BAI15334.1| threonyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-32]
 gi|256652379|dbj|BAI18313.1| threonyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01-42C]
 gi|256655437|dbj|BAI21364.1| threonyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-12]
          Length = 645

 Score =  740 bits (1911), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/654 (50%), Positives = 464/654 (70%), Gaps = 15/654 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP+   +T PDGS+++F    TG+ VAE+I   LAK A+A+ ++GK+CD+   + ++ ++
Sbjct: 3   MPA---ITLPDGSVRSFDGPVTGTTVAEAIGPGLAKAALAMEVDGKLCDIRQTINKDAAL 59

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
             IT +DP SL +IRH  AH++AEAVQ+++P  QV IGP IE+GFYYDF + +PFS ++ 
Sbjct: 60  RFITRKDPESLELIRHDAAHVLAEAVQALYPGTQVTIGPSIENGFYYDFYRSEPFSPEDF 119

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A IE KM+EI+A+  PF+++    + A   FE + E +K E++  +P  E +++YRQGEW
Sbjct: 120 AAIEAKMREIVAKAEPFVREVWKRDDAIRFFEERGEKFKAELIRDLPEDEEISIYRQGEW 179

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPH+R+T  V   FKLMKVAGAYWRGD   PML+R+YGTAW  Q+EL  +L+ LE
Sbjct: 180 LDLCRGPHLRTTKDVGTAFKLMKVAGAYWRGDHRNPMLTRVYGTAWRDQKELDAHLHQLE 239

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+EKRDHR++ +EM LFH  E+  G +FWH KGW+++  L  YMRR + +  Y+E+ TPQ
Sbjct: 240 EAEKRDHRRIGKEMGLFHFQEEAVGQVFWHAKGWRLYTALQDYMRRAQTRHGYQEVRTPQ 299

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D+ LW+ SGHWD YR +MF     D+     +T ALKPMNCP HV +F HGL+SYREL
Sbjct: 300 LVDRALWEASGHWDKYRHHMFIATVEDEN----KTLALKPMNCPCHVQIFRHGLRSYREL 355

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG+ +R EPSG+LHGLMRVRGFTQDDAH+FCT++Q+ +E ++   ++  +Y+D 
Sbjct: 356 PLRMAEFGACHRYEPSGALHGLMRVRGFTQDDAHIFCTEDQIADETVRFVKMLHDVYQDL 415

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE + VK + RPE+R GSD +WD AEN +K    T+     +        GEGAFYGPK
Sbjct: 416 GFEHVRVKFADRPEQRAGSDEVWDKAENALKEAC-TVAGVEYEHNP-----GEGAFYGPK 469

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E++L+DAIGRDWQCGT+QVD  LP R +A Y+   S +  PVM+HRA+ GS ERF+GI+
Sbjct: 470 LEFVLRDAIGRDWQCGTLQVDLVLPERLDASYIGEDSGRHRPVMLHRAILGSFERFLGIL 529

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE   G  PLWL+P+Q +V +I S A  YA+E+A  L+   L++E D RN+ IN K+REH
Sbjct: 530 IEQHAGRFPLWLAPVQVVVASIVSDAAPYAEEVAAALREAGLAVEADVRNDKINAKVREH 589

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           S+ ++P+I++ G +EA ER++ +RR G+   + +SL DA+  L  E+ PPD +K
Sbjct: 590 SVARVPVILVVGRREAEERTVAMRRLGTQVQETLSLDDAVARLKNEATPPDLRK 643


>gi|254462954|ref|ZP_05076370.1| threonyl-tRNA synthetase [Rhodobacterales bacterium HTCC2083]
 gi|206679543|gb|EDZ44030.1| threonyl-tRNA synthetase [Rhodobacteraceae bacterium HTCC2083]
          Length = 643

 Score =  734 bits (1895), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 341/651 (52%), Positives = 465/651 (71%), Gaps = 15/651 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           +++ LTFPDG+ + +    T +DVA  IS SL KKA++  +NG   DL  P+  + SI +
Sbjct: 2   ANVTLTFPDGNQREYARGITAADVAADISSSLRKKAISATVNGAHWDLQWPIESDSSIAL 61

Query: 62  ITPEDPR-SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            T +D + +L ++RH  AHIMA AVQ IWP+V+V IGP+I+DG+YYDFD+++PF+ ++L+
Sbjct: 62  NTMKDEKPALELVRHDLAHIMARAVQEIWPDVKVTIGPVIKDGWYYDFDRQEPFTPEDLS 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEKKM+EII        +     +A + +E   E YKVE++++IP  E + +Y  G+W 
Sbjct: 122 VIEKKMKEIINARDAVRTEVWDRARAIKHYEDNNEPYKVELIDAIPGDEPLRMYWHGDWQ 181

Query: 181 DLCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           D+CRGPH++ TGQV    +KLM VAGAYWRGDS+RPML RIYG A+  +++L  +L FLE
Sbjct: 182 DMCRGPHLQHTGQVPGDSWKLMSVAGAYWRGDSDRPMLQRIYGAAFANKEQLKAHLTFLE 241

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+ KRDHRKL REM LFH  E   G + WH  GW++FQTLI+YMRR+     Y E+NTP 
Sbjct: 242 EAAKRDHRKLGREMGLFHFEEVAPGSVIWHPNGWRVFQTLIAYMRRRQDVAGYVEVNTPD 301

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D+ LW+ SGHW +Y+ NMF  +  DD     R +ALKPMNCPGH+ V+NH L+SYR+L
Sbjct: 302 IMDRALWETSGHWFNYKENMFLAQTQDD-----RDYALKPMNCPGHMMVYNHSLRSYRDL 356

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           PV++AEFG V+R EPSG+LHGL+RVR FTQDDAH++C+ EQ+ +ECLK+++LI+SIYKDF
Sbjct: 357 PVKIAEFGKVHRYEPSGALHGLLRVRSFTQDDAHIYCSPEQLTDECLKVNDLILSIYKDF 416

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE + VKLSTRPE R+GSD  WD +E  +K  L+    S        +  GEGAFYGPK
Sbjct: 417 GFEDVHVKLSTRPENRIGSDESWDLSEGALKTALERAGMSYT------IFEGEGAFYGPK 470

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            EY+L+DAIGRDWQCGT+QVD+NLP RF + YV++  EK  PVM+HRA+FGS+ERFIGI+
Sbjct: 471 LEYVLRDAIGRDWQCGTLQVDYNLPERFGSTYVSASGEKLAPVMLHRALFGSLERFIGIL 530

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IEN++G LP WL+P Q +V +I S A +Y  E  + LK+  +  E D RNE INYK+REH
Sbjct: 531 IENWEGKLPFWLAPRQVVVASIISDADDYVYEAVDALKAAGVQAEADIRNEKINYKVREH 590

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPD 649
           S+ K+P+I+  G +E  ER++ +RR G   T+  +L   I  L+ E+ PPD
Sbjct: 591 SVGKVPVILAIGAREVEERTVTVRRLGEKQTKVEALESVISALSLEATPPD 641


>gi|91762425|ref|ZP_01264390.1| Threonyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1002]
 gi|91718227|gb|EAS84877.1| Threonyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1002]
          Length = 638

 Score =  734 bits (1895), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 340/644 (52%), Positives = 464/644 (72%), Gaps = 16/644 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPE 65
           +T PDG+   FP   TG +VAE IS+SL+K+A  +++N ++ DLS  + E  S++I T +
Sbjct: 4   ITLPDGNTIEFPNKVTGLEVAEKISKSLSKQATIISVNEELKDLSFVIDEDCSVKIFTSK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L  IRH  AHI A AVQ ++P  QV IGPIIE+GFYYDF +++PF+ D+L +IE K
Sbjct: 64  DKEGLETIRHDTAHITAMAVQELFPGTQVTIGPIIENGFYYDFSRKEPFTEDDLNKIENK 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+EI+ RD P  ++    +KA   F+ K E YK EI+ESIP  E+V++Y  G+W DLCRG
Sbjct: 124 MKEIVDRDVPTTREVWKRDKAISHFKDKGEIYKAEIIESIPQGEDVSIYFHGDWHDLCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PH+ STG++ K+FKL KV+GAYWRGDSN  ML RIYGT+W +Q++L +YL  +EE+EKRD
Sbjct: 184 PHLSSTGKIGKYFKLTKVSGAYWRGDSNNEMLQRIYGTSWASQKDLDEYLKRIEEAEKRD 243

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHL 304
           HRKL +EMDLFH  E+  G +FWH KGWK+FQ L++YMR R+ K  Y+E+NTP++LD+ L
Sbjct: 244 HRKLGKEMDLFHFREESPGSVFWHEKGWKLFQKLVAYMRARQEKAGYKEVNTPEILDRSL 303

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHW+ Y  +M+  +  D+ I     FA+KPMNCPGHV VFN GLKSYR+LP+R++E
Sbjct: 304 WEKSGHWEKYGEHMYTSQTPDEKI-----FAIKPMNCPGHVQVFNQGLKSYRDLPLRISE 358

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FG V+R EPSG+LHGL+RVR FTQDDAH+FCT++Q+ +ECL + NLI+ IYKD GFE ++
Sbjct: 359 FGKVHRYEPSGALHGLLRVRAFTQDDAHIFCTEDQITSECLIVTNLILDIYKDLGFEDVI 418

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +K S RP+ RVG D +WD AE   K +LD +K S   ++   +  GEGAFYGPK E++L+
Sbjct: 419 LKYSDRPDLRVGDDNVWDKAE---KALLDAVKAS---KLQYTINKGEGAFYGPKIEFVLR 472

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           DAIGRDWQCGT+QVD NLP R +A +V+    K  PVM+HRA+FGS+ERFIGI+IEN+ G
Sbjct: 473 DAIGRDWQCGTLQVDLNLPGRLDASFVDKDGTKKIPVMLHRALFGSLERFIGILIENYAG 532

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P W++P+QA+V  I+     YA+E+   + +  +S E D +N  +NYKIREHS+ KIP
Sbjct: 533 KFPFWIAPLQAVVIPISEEFDTYAKEVNEKINNAGISSEVDLKNHNLNYKIREHSLSKIP 592

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSL---LDAIPILTKES 645
           +++ICG KE    S+ IRR  +   + + L   L+    L K S
Sbjct: 593 LLLICGKKEVDSNSVTIRRLDTNKQENMELNLFLETFSALNKAS 636


>gi|330994118|ref|ZP_08318046.1| Threonyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1]
 gi|329758585|gb|EGG75101.1| Threonyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1]
          Length = 644

 Score =  733 bits (1891), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 333/654 (50%), Positives = 462/654 (70%), Gaps = 15/654 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP+   +T PDGS++ F    TG+ VA+SI   LA+ A+A+ ++GK+ D+   V  +  +
Sbjct: 1   MPA---ITLPDGSVRRFDGAVTGTTVAQSIGAGLARAALAMEVDGKLMDIGRAVDHDAHV 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
             IT +DP +L +IRH  AH++AEAVQS++P  QV IGP IE+GFYYDF + +PFS ++ 
Sbjct: 58  RFITRKDPEALEMIRHDAAHVLAEAVQSLFPGTQVTIGPSIENGFYYDFYRNEPFSPEDF 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A IEK+M EI+A + PF+++    EKA E FE + E +K E++  +P  E +++YRQGEW
Sbjct: 118 AAIEKRMAEIVAANEPFVREAWPREKAIEFFEDRGERFKAELIRDLPEDEEISIYRQGEW 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPH+R T  V   FKLMKVAGAYWRGD   PML+RIYGTAW  ++EL  +L+ LE
Sbjct: 178 LDLCRGPHLRGTADVGTAFKLMKVAGAYWRGDHRNPMLTRIYGTAWRDRKELEAHLHQLE 237

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+E+RDHR++ REMDLFHI E+  G IFWH KGW+++  L  YMRR + ++ Y+E+ TPQ
Sbjct: 238 EAERRDHRRIGREMDLFHIQEEAVGQIFWHPKGWRLYSVLQDYMRRAQDRNGYQEVRTPQ 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D+ LW+ SGHWD YR +MF     D+     +T ALKPMNCP HV +F HGL+SYREL
Sbjct: 298 LVDRALWEASGHWDKYREHMFIATVEDED----KTLALKPMNCPCHVQIFRHGLRSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG+ +R EPSG+LHG+MRVRGFTQDDAH+FCT++Q+ +E  +   ++  +Y+D 
Sbjct: 354 PLRMAEFGACHRYEPSGALHGIMRVRGFTQDDAHIFCTEDQIADETARFVRMLADVYQDL 413

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE   VK + RPE+R G DA WD AEN +K   D    + +         GEGAFYGPK
Sbjct: 414 GFEHFRVKFADRPEQRAGDDATWDRAENALKVACDMAGVTYEHNP------GEGAFYGPK 467

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E++L+DAIGRDWQCGT+QVD+ LP R +A YV   S +  PVM+HRA+ GS ERF+GI+
Sbjct: 468 LEFVLRDAIGRDWQCGTLQVDYVLPERLDASYVGEDSARHRPVMLHRAILGSFERFLGIL 527

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE   G  PLWL+P+Q +V +I + A +YAQ++A+ L++  L +E D RNE IN KIREH
Sbjct: 528 IEQHAGRFPLWLAPVQVVVASIVTDAADYAQQVADRLRAAGLVVEADLRNEKINAKIREH 587

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           S+ ++P+I++ G KEA E ++ +RR G    + + L +A+  L  E+LPPD ++
Sbjct: 588 SLARVPVILVVGRKEAEENTVAMRRLGGKAQEVLPLDEAVSALAYEALPPDIRR 641


>gi|71083144|ref|YP_265863.1| threonyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1062]
 gi|123734387|sp|Q4FNH9|SYT_PELUB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|71062257|gb|AAZ21260.1| Threonyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1062]
          Length = 638

 Score =  731 bits (1888), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 338/644 (52%), Positives = 464/644 (72%), Gaps = 16/644 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDG+   FP   TG +VAE IS+SL+K+A  +++N ++ DLS  + ++ S++I T +
Sbjct: 4   ITLPDGNTIEFPNKVTGLEVAEKISKSLSKQATIISVNEELKDLSFVLDKDCSVKIFTSK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L  IRH  AHI A AVQ ++P  QV IGPIIE+GFYYDF +++PF+ D+L +IE K
Sbjct: 64  DKEGLETIRHDTAHITAMAVQELFPGTQVTIGPIIENGFYYDFSRKEPFTEDDLNKIENK 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+EI+ RD P  ++    +KA   F+ K E YK EI+ESIP  E+V++Y  G+W DLCRG
Sbjct: 124 MKEIVDRDVPTTREVWKRDKAISHFKDKGEIYKAEIIESIPQGEDVSIYFHGDWHDLCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PH+ STG++ K+FKL KV+GAYWRGDSN  ML RIYGT+W +Q++L +YL  +EE+EKRD
Sbjct: 184 PHLSSTGKIGKYFKLTKVSGAYWRGDSNNEMLQRIYGTSWASQKDLDEYLKRIEEAEKRD 243

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHL 304
           HRKL +EMDLFH  E+  G +FWH KGWK+FQ L++YMR R+ K  Y+E+NTP++LD+ L
Sbjct: 244 HRKLGKEMDLFHFREESPGSVFWHEKGWKLFQKLVAYMRARQEKAGYKEVNTPEILDRSL 303

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHW+ Y  +M+  +  D+ I     FA+KPMNCPGHV VFN GLKSYR+LP+R++E
Sbjct: 304 WEKSGHWEKYGEHMYTSQTPDEKI-----FAIKPMNCPGHVQVFNQGLKSYRDLPLRISE 358

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FG V+R EPSG+LHGL+RVR FTQDDAH+FCT++Q+ +ECL + NLI+ IYKD GFE ++
Sbjct: 359 FGKVHRYEPSGALHGLLRVRAFTQDDAHIFCTEDQITSECLIVTNLILDIYKDLGFEDVI 418

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +K S RP+ RVG D +WD AE   K +LD +K S   ++   +  GEGAFYGPK E++L+
Sbjct: 419 LKYSDRPDLRVGDDNVWDKAE---KALLDAVKAS---KLQYTINKGEGAFYGPKIEFVLR 472

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           DAIGRDWQCGT+QVD NLP R +A +V+    K  PVM+HRA+FGS+ERFIGI+IEN+ G
Sbjct: 473 DAIGRDWQCGTLQVDLNLPGRLDASFVDKDGTKKIPVMLHRALFGSLERFIGILIENYAG 532

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P W++P+Q +V  I+     YA+E+   + +  +S E D +N  +NYKIREHS+ KIP
Sbjct: 533 KFPFWIAPLQVVVIPISEEFDSYAKEVNEKINNAGISSEVDLKNHNLNYKIREHSLSKIP 592

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSL---LDAIPILTKES 645
           +++ICG KE    S+ IRR  +   + + L   L+    L K S
Sbjct: 593 LLLICGKKEVDSNSVTIRRLDTNKQENMELNLFLETFSALNKAS 636


>gi|294084802|ref|YP_003551562.1| threonyl-tRNA synthetase [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292664377|gb|ADE39478.1| Threonyl-tRNA synthetase [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 641

 Score =  731 bits (1886), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/653 (50%), Positives = 466/653 (71%), Gaps = 16/653 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP+   +T PDGS+++F    T +DVA  I   LAK A+   ++G+  DL+  V  + ++
Sbjct: 1   MPN---ITLPDGSVRSFDAPVTPADVAADIGPGLAKAALLAVVDGEEWDLTRAVDTDVNM 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            +IT +D  +LA++RH CAH+MAEAV  ++PE QV IGP IE+GFYYDF +E+ FS D+L
Sbjct: 58  ALITAKDDAALALLRHDCAHVMAEAVLELYPETQVTIGPAIENGFYYDFHREKAFSEDDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A IEK+M EI+ RD    +   + ++A   +E   E +KVE++ +IPA+E VT Y+QG +
Sbjct: 118 ALIEKRMHEIVDRDEAITRDVWTRDEAVAFYEKNNEPFKVELVAAIPAEETVTFYKQGNF 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPH+ STG++   FKLMKVAGAYWRGDS+RPML RIYGTAW T++EL  YL+ LE
Sbjct: 178 IDLCRGPHLPSTGKLGHAFKLMKVAGAYWRGDSDRPMLQRIYGTAWRTEKELNAYLHMLE 237

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+EKRDHRKL +++D+FH+ E+ +G +FWH+KGW I++ + SY+RR+++   Y E+ TPQ
Sbjct: 238 EAEKRDHRKLGKQLDMFHLQEEAAGSVFWHQKGWFIYREIESYVRRRLEQAGYGEVKTPQ 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D+ LW++SGHWD +R NMF  +  D+     RT ALKPMNCP HV +F  G+KSYR+L
Sbjct: 298 LVDRTLWEESGHWDKFRENMFTAQSEDE-----RTLALKPMNCPCHVQIFRQGIKSYRDL 352

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFGS +RNEPSG+LHG+MRVR FTQDDAH+FCT++Q+  E ++   L+ SIY DF
Sbjct: 353 PLRMAEFGSCHRNEPSGALHGIMRVRAFTQDDAHIFCTEDQITEESVQFCALLQSIYADF 412

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF  + VK S RPE R G DA WD AE+ +          S  ++ T +  GEGAFYGPK
Sbjct: 413 GFTDVRVKFSDRPEVRAGDDATWDKAESALTDA------CSAAKLETTLNPGEGAFYGPK 466

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E++L+DAIGRDWQCGT+QVDF LP R +A YV     +  PVM+HRA+ GS+ER+IGI+
Sbjct: 467 LEFVLRDAIGRDWQCGTLQVDFVLPERLDAEYVGEDGNRHRPVMLHRAILGSMERWIGIL 526

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE + G +P WL+P+Q +V +IT SA +YA+++A   ++  L +E DFRNE I+YK+REH
Sbjct: 527 IEQYSGRMPNWLAPVQIVVASITDSANDYAEQVARTAEAMGLRVERDFRNEKISYKVREH 586

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           S+ K+P I+  G +EA   ++ +RR GS     + + +A+ +L  ES+ PD +
Sbjct: 587 SVMKVPFILAVGGREAEAGTVALRRLGSNDQTVLDMKEALAMLRDESVAPDLK 639


>gi|254456038|ref|ZP_05069467.1| threonyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211]
 gi|207083040|gb|EDZ60466.1| threonyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211]
          Length = 638

 Score =  727 bits (1877), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 330/628 (52%), Positives = 454/628 (72%), Gaps = 13/628 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDG+  NFP   TG DVAE IS+SLAK+A+ +++NG++ DL   +  + SI+I T +
Sbjct: 4   ITLPDGNNLNFPNKVTGLDVAEKISKSLAKQAMVISVNGELKDLDHIIENDCSIKIFTSK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           +P  L  IRH  AHI+A AVQ ++P  QV IGP+IE+GFYYDF +++ F+ D+L +IE K
Sbjct: 64  NPEGLETIRHDTAHILAMAVQELFPGTQVTIGPVIENGFYYDFARKESFTEDDLIKIENK 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+EI+ RD    ++     KA   F+ K E YK E++E+IP  E+V++Y  G+W DLCRG
Sbjct: 124 MKEIVDRDEITKREVWERNKAIAHFKKKGEVYKAELIEAIPENEDVSIYFHGDWHDLCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PH+ STG++ K+FKL KV+GAYWRGDS   ML RIYGT+W +Q+EL +YL  +EE+EKRD
Sbjct: 184 PHLSSTGKIGKYFKLTKVSGAYWRGDSKNEMLQRIYGTSWASQKELDEYLKRIEEAEKRD 243

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHL 304
           HRKL +EMDLFH  E+  G +FWH KGW +FQ LI+YMR R+    Y E+NTP++LD+ L
Sbjct: 244 HRKLGKEMDLFHFREESPGSVFWHEKGWALFQKLINYMRSRQDAAGYREVNTPEILDRQL 303

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHW+ Y  NM+  +  D+     + FA+KPMNCPGH+ VFN GLKSYR+LP+R+AE
Sbjct: 304 WEKSGHWEKYGENMYTSETPDE-----KVFAIKPMNCPGHIQVFNQGLKSYRDLPIRIAE 358

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FG V+R EPSG+LHGL+RVR FTQDDAH+FC+++Q+ +ECL++ NLI+ IYKD GFE ++
Sbjct: 359 FGKVHRYEPSGALHGLLRVRAFTQDDAHIFCSEDQITSECLEVTNLILDIYKDLGFENVI 418

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +K + RPE RVG D +WD AE     +L+ +K S   ++   +  GEGAFYGPK E++L+
Sbjct: 419 LKYADRPEVRVGDDEIWDKAE---ASLLEAVKAS---KLEYSINKGEGAFYGPKIEFVLR 472

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           DAIGRDWQCGT+QVD NLP R +A YV+    K  PVM+HRA+FGS+ERFIGI+IEN+ G
Sbjct: 473 DAIGRDWQCGTLQVDLNLPGRLDASYVDKDGTKKVPVMLHRALFGSLERFIGILIENYAG 532

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P W+SP+Q +V  I+    +YA E++  +K   +S   D +N  +NYKIR+HS+ KIP
Sbjct: 533 KFPFWISPLQTMVIPISEEFNDYAVEVSKKIKKVGISSAVDLKNNNLNYKIRDHSLAKIP 592

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKV 632
           +++ICG KE    S+ IRR  S   + +
Sbjct: 593 VLLICGKKEVDSNSVTIRRLDSNKQENM 620


>gi|330813582|ref|YP_004357821.1| threonyl-tRNA synthetase [Candidatus Pelagibacter sp. IMCC9063]
 gi|327486677|gb|AEA81082.1| threonyl-tRNA synthetase [Candidatus Pelagibacter sp. IMCC9063]
          Length = 638

 Score =  726 bits (1873), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 338/644 (52%), Positives = 464/644 (72%), Gaps = 13/644 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDL-SDPVREGSIEIITPE 65
           +  PDG    +    TG ++A+ IS SL+KKA+A+ +NG+  DL ++ V++  I+IIT E
Sbjct: 4   VQLPDGKELTYKNSVTGLEIAKDISISLSKKALALKVNGEYKDLDTEIVKDSKIKIITLE 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D  +L ++RH  AH+ A AVQ ++P  QV IGP+IE+GFYYDF +E+PF+ D+L +IEKK
Sbjct: 64  DEYALELLRHDAAHVCAMAVQELFPGTQVTIGPVIENGFYYDFAREEPFTDDDLIKIEKK 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M EI+ R+    ++    +KA + F+S  E YK EI++SIP  E++++Y  G W DLCRG
Sbjct: 124 MIEIVDRNDKTTREVWDRKKAIDHFKSMGEHYKAEIIDSIPGNEDISIYFHGSWHDLCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PH+ S G++ K FKLMKVAGAYWRGDSN  ML RIYGT W T+++L +YL+ LEE+EKRD
Sbjct: 184 PHLPSIGRIGKSFKLMKVAGAYWRGDSNNVMLQRIYGTCWKTKKDLDEYLHNLEEAEKRD 243

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHL 304
           HRKL + MDLFH  E+  G +FWH+KGW +FQTL+ +MR+K ++  Y+E+NTP+++D+ L
Sbjct: 244 HRKLGKTMDLFHFQEESPGAVFWHQKGWALFQTLVDFMRQKQLEAGYQEVNTPEIIDRVL 303

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHW+ ++  M+     D+     RTFA+KPMNCPGH  ++N GLKSY++LP++L+E
Sbjct: 304 WEKSGHWEKFQEYMYTTSTPDE-----RTFAIKPMNCPGHCQIYNQGLKSYKDLPLKLSE 358

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FG V+R EPSGSLHGLMRVR FTQDDAH+FCT++Q+  E +K+  LI+ IYK FGFE I 
Sbjct: 359 FGKVHRYEPSGSLHGLMRVRSFTQDDAHIFCTEDQITEESVKVTKLILDIYKAFGFENIT 418

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +K + RP KRVG D++WD +E   K +L+ IK S   +++  +  GEGAFYGPK E++L+
Sbjct: 419 LKYADRPAKRVGDDSVWDQSE---KALLEAIKAS---KVDYTINKGEGAFYGPKIEFVLR 472

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           DAIGRDWQCGT+QVD NLP R +A YV+   +K  PVM+HRA+FGS+ERF GI+IE++ G
Sbjct: 473 DAIGRDWQCGTLQVDLNLPGRLDATYVDKDGKKKTPVMLHRALFGSLERFTGILIEHYAG 532

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
            LPLWLSP+Q  +  I     +YA+EI N L+   +    D RNE INYKIREHS+ KIP
Sbjct: 533 KLPLWLSPVQVAILPINDEHHDYAKEILNQLEKISIRPIIDLRNEKINYKIREHSVGKIP 592

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
           I++ICG KE   ++I +RR G    Q  SL   I  L+KES  P
Sbjct: 593 ILMICGSKEVQNKTITLRRLGQEDQQTESLEKIISSLSKESQAP 636


>gi|148261186|ref|YP_001235313.1| threonyl-tRNA synthetase [Acidiphilium cryptum JF-5]
 gi|166223313|sp|A5G0L2|SYT_ACICJ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|146402867|gb|ABQ31394.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Acidiphilium
           cryptum JF-5]
          Length = 640

 Score =  725 bits (1871), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/653 (50%), Positives = 461/653 (70%), Gaps = 15/653 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP+   +T PDGS++++P   TG+++A SI   LAK A+A+ ++GK+ DLS  +  +  +
Sbjct: 1   MPA---ITLPDGSVRDYPGPVTGTEIAASIGPGLAKAALAMEVDGKMMDLSRTLDADARL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
             IT  D  SL +IRH  AH+MAEAVQ+++P  QV IGP IE GFYYDF + +PF+ D+L
Sbjct: 58  RFITRRDADSLELIRHDAAHVMAEAVQALYPGTQVTIGPAIEGGFYYDFFRNEPFTPDDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IE KM+EIIA ++PF ++    ++A   FE++ E +K E++  +PA E +T+YRQG+W
Sbjct: 118 PAIEAKMREIIAANAPFTREVWDRDEAIRFFEARGERFKAELIRDLPASETITIYRQGDW 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPH+R TG +   FKL KVAGAYWRGD   PMLSRIYGTAW  Q+EL  +L  LE
Sbjct: 178 LDLCRGPHMRGTGDIGGAFKLTKVAGAYWRGDHRNPMLSRIYGTAWRDQKELDAHLKQLE 237

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E+RDHRK+ R+MDLFH+ E+  G +FWH KGW++++T+ +YMRR+ ++  Y E+ TPQ
Sbjct: 238 EAERRDHRKIGRQMDLFHMQEEAVGSVFWHEKGWRLYRTVEAYMRRRQEEFGYIEVRTPQ 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +LD+ LW+ SGHWD+YR++MF  +  D+     +  A+KPMNCP HV +FNHGL+SYREL
Sbjct: 298 LLDRKLWEASGHWDNYRSHMFIAEVEDED----KVLAVKPMNCPCHVQIFNHGLRSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG+ +R EPSG+LHG+MRVR F QDDAH+FCT++Q+ +E ++   ++  +Y DF
Sbjct: 354 PLRMAEFGACHRYEPSGALHGIMRVRAFAQDDAHIFCTEDQIADETVRFVEMLRRVYADF 413

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF +  VK + RP  R GSD +WD AE  ++   +T        +   V  GEGAFYGPK
Sbjct: 414 GFPEFAVKFADRPTPRSGSDEVWDKAEAALRSACETAG------VEFTVNPGEGAFYGPK 467

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E++L+DAIGRDWQCGT+QVDF LP R +A YV + S +  PVM+HRA+ GS ERFIGI+
Sbjct: 468 LEFVLRDAIGRDWQCGTLQVDFVLPERLDASYVTAESGRARPVMLHRAIVGSFERFIGIL 527

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IEN  G  PLWL+P QA V +I + A +YA+ +A  LK   L++ TD RNE IN K+R+ 
Sbjct: 528 IENCAGRFPLWLAPTQAAVASIVTDANDYAETVAARLKEAGLAVATDTRNEKINAKVRDL 587

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           S+  +P I++ G +EA ++++ IRR GS     ++L +AI  L  E+ PPD +
Sbjct: 588 SLALVPNILVVGRREAEQQTVSIRRLGSDKQDSMTLDEAIATLKAEATPPDLR 640


>gi|326404590|ref|YP_004284672.1| threonyl-tRNA synthetase [Acidiphilium multivorum AIU301]
 gi|325051452|dbj|BAJ81790.1| threonyl-tRNA synthetase [Acidiphilium multivorum AIU301]
          Length = 640

 Score =  724 bits (1869), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/653 (50%), Positives = 461/653 (70%), Gaps = 15/653 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP+   +T PDGS++++P   TG+++A SI   LAK A+A+ ++GK+ DLS  +  +  +
Sbjct: 1   MPA---ITLPDGSVRDYPGPVTGTEIAASIGPGLAKAALAMEVDGKMMDLSRTLDADARL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
             IT  D  SL +IRH  AH+MAEAVQ+++P  QV IGP IE GFYYDF + +PF+ D+L
Sbjct: 58  RFITRRDADSLELIRHDAAHVMAEAVQALYPGTQVTIGPAIEGGFYYDFFRNEPFTPDDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IE KM+EIIA ++PF ++    ++A   FE++ E +K E++  +PA E +T+YRQG+W
Sbjct: 118 PAIEAKMREIIAANAPFTREVWDRDEAIRFFEARGERFKAELIRDLPASETITIYRQGDW 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPH+R TG +   FKL KVAGAYWRGD   PMLSRIYGTAW  Q+EL  +L  LE
Sbjct: 178 LDLCRGPHMRGTGDIGGAFKLTKVAGAYWRGDHRNPMLSRIYGTAWRDQKELDAHLKQLE 237

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E+RDHRK+ R+MDLFH+ E+  G +FWH KGW++++T+ +YMRR+ ++  Y E+ TPQ
Sbjct: 238 EAERRDHRKIGRQMDLFHMQEEAVGSVFWHEKGWRLYRTVEAYMRRRQEEFGYIEVRTPQ 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +LD+ LW+ SGHWD+YR++MF  +  D+     +  A+KPMNCP HV +FNHGL+SYREL
Sbjct: 298 LLDRKLWEASGHWDNYRSHMFIAEVEDED----KVLAVKPMNCPCHVQIFNHGLRSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG+ +R EPSG+LHG+MRVR F QDDAH+FCT++Q+ +E ++   ++  +Y DF
Sbjct: 354 PLRMAEFGACHRYEPSGALHGIMRVRAFAQDDAHIFCTEDQIADETVRFVEMLRRVYADF 413

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF +  VK + RP  R GSD +WD AE  ++   +T        +   V  GEGAFYGPK
Sbjct: 414 GFPEFAVKFADRPTPRSGSDEVWDKAEAALRSACETAG------VTFTVNPGEGAFYGPK 467

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E++L+DAIGRDWQCGT+QVDF LP R +A YV + S +  PVM+HRA+ GS ERFIGI+
Sbjct: 468 LEFVLRDAIGRDWQCGTLQVDFVLPERLDASYVTAESGRARPVMLHRAIVGSFERFIGIL 527

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IEN  G  PLWL+P QA V +I + A +YA+ +A  LK   L++ TD RNE IN K+R+ 
Sbjct: 528 IENCAGRFPLWLAPTQAAVASIVTDANDYAETVAAKLKEAGLAVATDTRNEKINAKVRDL 587

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           S+  +P I++ G +EA ++++ IRR GS     ++L +A+  L  E+ PPD +
Sbjct: 588 SLALVPNILVVGRREAEQQTVSIRRLGSDKQDSMTLDEAVATLKAEATPPDLR 640


>gi|302381720|ref|YP_003817543.1| threonyl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264]
 gi|302192348|gb|ADK99919.1| threonyl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264]
          Length = 639

 Score =  723 bits (1867), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 333/649 (51%), Positives = 452/649 (69%), Gaps = 13/649 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           I+LTFPDG+ + +P  +T  DVA +IS SLAKKAV   +NG+  DL+  +  G S  +I 
Sbjct: 2   IQLTFPDGATREYPAGSTARDVAHAISPSLAKKAVLAELNGEQRDLNRVLETGGSFRLIM 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +DP +L  IRH  AH++AEAVQ+++P  QV IGP IEDGFYYDF +E PFS+D+ A IE
Sbjct: 62  RDDPEALYTIRHDTAHVLAEAVQTLFPGTQVTIGPAIEDGFYYDFFRETPFSTDDFAAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M  I+ RD+ F ++    ++A   FE+K E +K E++  +P  + +TLY+QG+W DLC
Sbjct: 122 KEMSRIVDRDAKFEREVWDRDEAITFFEAKGEKFKAELIRDLPGDQTITLYKQGDWIDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH  ST  V K FKL K+AGAYWRGDSNR  L RIYGTAW T+ +L  YL  +EE+EK
Sbjct: 182 RGPHFPSTKSVGKAFKLTKLAGAYWRGDSNREQLQRIYGTAWATKDDLDAYLLRIEEAEK 241

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQ 302
           RDHRKL R+M+LFH+ E+G G++FWH KGW ++Q + +YMRR++    Y E+ TPQVLD+
Sbjct: 242 RDHRKLGRQMELFHMQEEGRGMVFWHPKGWILWQVIEAYMRRRLDAAGYVEVKTPQVLDR 301

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             W+ SGHW+ YR NMF  +  +       T +LKPMNCPGHV +F  G +SYRELP+R+
Sbjct: 302 KFWEASGHWEKYRPNMFVCETVEG-----ETLSLKPMNCPGHVQIFGIGQRSYRELPLRM 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFG+ +R EPSG+LHGLMRVRGFTQDDAH+FC ++Q+  E  +   L   ++ D G + 
Sbjct: 357 AEFGACHRYEPSGALHGLMRVRGFTQDDAHIFCREDQIVEETRRFIELTRIVHADLGMQT 416

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             + L+TRP+ R GSD  WD AE ++    +  + +  D +   +  G+GAFY PK +++
Sbjct: 417 AYINLATRPDVRAGSDEFWDKAEGMLG---EAARLAGVDPV---IAEGDGAFYAPKLDFV 470

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDAIGR+W CGT+Q+D+ LP R NA YV    +K  PVM+HRA+ GS ERFIGIMIEN+
Sbjct: 471 VKDAIGREWTCGTLQLDYVLPERLNAEYVGEDGQKHRPVMLHRAILGSFERFIGIMIENY 530

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  PLWL+P+QA+V TITS A  YA+E+A   K+  L +ETD RNE + YK+REHS+ K
Sbjct: 531 AGAFPLWLAPVQAVVATITSDADGYAEEVAAKFKAAGLRVETDLRNEKVGYKVREHSVGK 590

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           +P+I + G  EA +  + IRR GS     VS+ +AI ILT+E+ PPD +
Sbjct: 591 VPVIAVVGRNEAEQGQVAIRRLGSQAQTVVSVEEAIRILTEEATPPDLR 639


>gi|262276749|ref|ZP_06054542.1| threonyl-tRNA synthetase [alpha proteobacterium HIMB114]
 gi|262223852|gb|EEY74311.1| threonyl-tRNA synthetase [alpha proteobacterium HIMB114]
          Length = 637

 Score =  723 bits (1865), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 341/646 (52%), Positives = 459/646 (71%), Gaps = 14/646 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           + +T PDG+IK +    TG+ +A+ I+ SL KKA+ V ++G+  DL   + ++  ++IIT
Sbjct: 2   VSITLPDGNIKEYTAAVTGAQIAKDIAPSLLKKALVVEVDGEFKDLGVEISKDSKVKIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D  +L +IRH  AH MA AVQ ++P  QV IGP+IE+GFYYDF +++PFS  +L +IE
Sbjct: 62  MDDDYALELIRHDSAHCMAMAVQELFPGTQVTIGPVIENGFYYDFARDEPFSDSDLEKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           KKM EII +D    ++    +KA + F+   E YK EI+ESIP  E +++Y  G+W DLC
Sbjct: 122 KKMNEIIDKDPKTTREVWDRDKAIQHFKKIGENYKAEIIESIPKGEELSIYFHGDWHDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ S G++ K FKLMKVAGAYWRGDSN  ML RIYGT W T+++L +YL+ +EE+EK
Sbjct: 182 RGPHLPSLGRIGKAFKLMKVAGAYWRGDSNNKMLQRIYGTCWKTKKDLDEYLHRIEEAEK 241

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL + +DLFH  E+  G +FWH+KGW +FQ+L+ +MR K  D  Y E+NTP++LD+
Sbjct: 242 RDHRKLGKALDLFHFQEESPGAVFWHQKGWSLFQSLVKFMRDKQTDAGYLEVNTPEMLDK 301

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHW+ ++ +M+       T  D +TFA+KPMNCPGH+ VFN GLKSY++LP+++
Sbjct: 302 TLWEKSGHWEKFQEHMYT------TDADEKTFAIKPMNCPGHIQVFNQGLKSYKDLPLKI 355

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           +EFG V+R EPSG+LHGLMRVR FTQDDAH+FCT+EQ+  E LK+ NLI+ IYK FGF+ 
Sbjct: 356 SEFGKVHRYEPSGALHGLMRVRAFTQDDAHIFCTEEQITEESLKVTNLILDIYKSFGFKN 415

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + +K S RPEKRVG D +W+ +E   K +LD IK S    +   +  GEGAFYGPK E++
Sbjct: 416 VKLKFSDRPEKRVGDDKIWNKSE---KALLDAIKTSG---LKYEINKGEGAFYGPKIEFV 469

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L DAIGRDWQCGT+QVDFNLP R  A YV +   K  PVM+HRA+FGS+ERFIGI+IE+ 
Sbjct: 470 LIDAIGRDWQCGTLQVDFNLPGRLGASYVANDGSKKIPVMLHRAMFGSLERFIGILIEHH 529

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WLSP Q  V  I++   +YA ++  LL+   L    D RNE INYKIREHS+ K
Sbjct: 530 TGKFPFWLSPEQVAVLPISNKQNDYASKVKLLLEKKGLRSIIDDRNEKINYKIREHSVSK 589

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
           IP+++ICG KE    +I IRR G T  Q VSL +A+  L+ ES  P
Sbjct: 590 IPVLMICGAKEVQNNTITIRRLGQTNQQTVSLEEAVTNLSLESNTP 635


>gi|163795474|ref|ZP_02189441.1| Threonyl-tRNA synthetase [alpha proteobacterium BAL199]
 gi|159179460|gb|EDP63991.1| Threonyl-tRNA synthetase [alpha proteobacterium BAL199]
          Length = 640

 Score =  721 bits (1861), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/653 (50%), Positives = 456/653 (69%), Gaps = 16/653 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP+   +T PDGS++++    T + VA  I   LAK A    ++GK  DL  P+ R+  +
Sbjct: 1   MPA---ITLPDGSVRSYDQPVTPAQVAADIGPGLAKAAFVARVDGKFVDLGLPIHRDAQL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            ++T +D  ++  IRH CAH+MAEAV  ++P+ QV IGP IE+GFYYDF +  PF+ D+L
Sbjct: 58  ALVTRKDEAAVEHIRHDCAHVMAEAVLELYPDAQVTIGPSIENGFYYDFHRATPFTPDDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEK+M +I+ RD P  ++  + E+A   +++  E +KVE+ E+IP  E ++ YRQG +
Sbjct: 118 VAIEKRMHDIVDRDEPITREEWTREQAIAHYKTTDEPFKVELAEAIPEGEIISFYRQGNF 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPH  ST  +   FKLMKVAGAYWRGDS++PML RIYGTA+  Q++L  YL+ LE
Sbjct: 178 LDLCRGPHGPSTKTIGHAFKLMKVAGAYWRGDSSKPMLQRIYGTAFADQKQLDAYLHMLE 237

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+EKRDHR+L RE+DLFHI E+  G +FWH KGW +++ + +Y+R ++++  Y EI TPQ
Sbjct: 238 EAEKRDHRRLGRELDLFHIQEEAVGSVFWHPKGWTLYRVIENYIRGRLEEGGYREIKTPQ 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D+ LW+ SGHWD +R  MF     DD +      ALKPMNCPGHV V+  GLKSYR+L
Sbjct: 298 LIDRALWEASGHWDKFREAMFTANAEDDKV-----LALKPMNCPGHVQVYKQGLKSYRDL 352

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFGS +RNEPSG+LHG+MRVR FTQDDAH+FCT++Q+ +E ++  +L+ S+Y+DF
Sbjct: 353 PLRLAEFGSCHRNEPSGALHGIMRVRAFTQDDAHIFCTEDQITSESIRFCDLLKSVYRDF 412

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE I +K S RPE R G DA+WD AE  ++   D         ++T +  GEGAFYGPK
Sbjct: 413 GFEDIRIKFSDRPEVRAGEDAVWDRAEGALRSACDAAG------LDTTLNPGEGAFYGPK 466

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E++L+DAIGRDWQCGT+QVDF LP R +A YV    E+  PVM+HRA+FGS+ER+IGI+
Sbjct: 467 LEFVLRDAIGRDWQCGTLQVDFVLPERLDANYVAESGERKRPVMLHRAIFGSMERWIGIL 526

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE + G  P+WLSP+Q +V TIT+ A  YA+E+A   K+  L +  D RNE INYKIREH
Sbjct: 527 IEQYSGRFPMWLSPLQVVVATITNDADGYAEEVAAACKAAGLRVAMDRRNEKINYKIREH 586

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           S  K+P I++ G +EA  RS+ +RR G    + ++L DA+  L  E+ PP  Q
Sbjct: 587 SEAKVPAILVVGAREAEGRSVAVRRLGGQAQEVLALDDAVHRLKTEATPPSGQ 639


>gi|40062682|gb|AAR37595.1| threonyl-tRNA synthetase [uncultured marine bacterium 314]
          Length = 638

 Score =  719 bits (1856), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 337/650 (51%), Positives = 465/650 (71%), Gaps = 16/650 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP +IKL  PDG    F     G ++A+ IS+SLAK A  +++NGK+ DLS  +  +  +
Sbjct: 1   MP-NIKL--PDGKKIPFSKTIDGFEIAKKISKSLAKDACIMSVNGKLRDLSFSIDNDVQV 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           +IIT +D   L VIRH  AH++A AVQ ++P  QV IGP+I+DGFYYDF +++ F+ ++L
Sbjct: 58  KIITKKDKEGLEVIRHDAAHVLAMAVQELFPGTQVTIGPVIKDGFYYDFSRKETFTDEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IE KM+EI+ RD P  ++     +A   F+   E YK EI+E IP  E +++Y  G+W
Sbjct: 118 KKIENKMKEIVDRDEPTKREVWKRNEAINHFKKIGEHYKAEIIEDIPKNEELSIYHHGKW 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLC+GPH+ STG++ K FKL KV+GAYWRGDSN  ML RIYGT W+ ++EL +YL  LE
Sbjct: 178 HDLCKGPHLPSTGKIGKAFKLTKVSGAYWRGDSNNEMLQRIYGTCWSNKKELDEYLLRLE 237

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E EKRDHRKL +EMDLFH  E+  G +FWH KGW +FQTL+ YMR K K   Y+EINTP+
Sbjct: 238 EIEKRDHRKLGKEMDLFHFREESPGAVFWHHKGWTLFQTLVGYMRLKQKKAGYKEINTPE 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +LD++LW+QSGHW+ +  NMF  +  D      +TFA+KPMNCPG + +FN GLKSYR+L
Sbjct: 298 ILDKNLWEQSGHWEKFGENMFTSETPDK-----KTFAIKPMNCPGCLQIFNQGLKSYRDL 352

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RL+EFG V+R EPSG+LHGL+RVR FTQDDAH+FCT++Q+ +ECL + NLI+ IYKD 
Sbjct: 353 PLRLSEFGKVHRYEPSGALHGLLRVRAFTQDDAHIFCTEDQITDECLSVTNLILEIYKDL 412

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+ ++++ S RP+KRVG D +WD AE+ +      +K   Q ++   +  GEGAFYGPK
Sbjct: 413 GFKNVLLQYSDRPQKRVGDDKIWDKAESAL------LKAIKQSKLKYEINKGEGAFYGPK 466

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +++L+D IGRDWQCGT+QVD NLPSR  A YV+S   K  PVM+HRA+FGS+ERFIGI+
Sbjct: 467 IDFVLRDTIGRDWQCGTLQVDLNLPSRLGASYVSSDGSKKVPVMLHRALFGSLERFIGIL 526

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE++ G LPLWL+PIQA+V  I S    YA++I        ++ E D +N+ INYKIREH
Sbjct: 527 IEHYAGKLPLWLAPIQAVVLPIASEFDNYAKKIFEQCMKAGINTEVDLKNKKINYKIREH 586

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
           S+ K+P+++ICG+KE   +S+ IR+ GS   + +SL  AI  ++++++ P
Sbjct: 587 SLSKVPLLLICGEKEVKGKSVTIRKLGSEKQETLSLDRAIKKISQQNMFP 636


>gi|209966088|ref|YP_002299003.1| threonyl-tRNA synthetase ThrS [Rhodospirillum centenum SW]
 gi|238065118|sp|B6IV67|SYT_RHOCS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|209959554|gb|ACJ00191.1| threonyl-tRNA synthetase ThrS [Rhodospirillum centenum SW]
          Length = 651

 Score =  717 bits (1851), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/648 (50%), Positives = 451/648 (69%), Gaps = 12/648 (1%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           + +T PDG ++ FP   TG  +A +I++SL K A+AV I+GK  DL+ PV +   +EI+T
Sbjct: 2   VSITLPDGGVRTFPRGTTGGQIASAIAKSLGKAALAVKIDGKQRDLALPVEQDCRLEILT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            E P +L +IRH  AHIMAEAVQ+++P  QV IGP I  GFYYDF + +PF+ D+L +IE
Sbjct: 62  RESPEALELIRHDAAHIMAEAVQALYPGTQVTIGPAIATGFYYDFARSEPFTPDDLVKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            KM EI+  D+PF ++    + A E F S  E YK +I+E +PA E +T+YRQG W+DLC
Sbjct: 122 AKMHEIVNADAPFTREVWKRDDAIEHFRSIGEKYKAQIIEDLPATETITIYRQGRWYDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG+V   FKLMKVAGAYWRGD+   ML RIYGTAW T++EL  +L+ +EE+EK
Sbjct: 182 RGPHLPSTGKVGHAFKLMKVAGAYWRGDARNEMLQRIYGTAWRTEKELADHLHQIEEAEK 241

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQ 302
           RDHRKL REMDLFH+ E+  G +FWH KGW +++TL +Y+R K+    Y E+ TPQ+ D 
Sbjct: 242 RDHRKLGREMDLFHVQEEAVGSVFWHPKGWALYRTLENYIRTKLDAAGYVEVRTPQLYDS 301

Query: 303 HLWQQSGHWDSYRANMFAVK--CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            L++ SGHWD Y  NMF ++   A+D  +  +   +KPMNCP HV +F  GLKSYR+LP+
Sbjct: 302 SLFKASGHWDMYGDNMFKIRESVAEDGTE--KFLGVKPMNCPAHVQIFRQGLKSYRDLPL 359

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AEFG+ +RNEPSG+LHG++RVR FTQDDAH+FCT++Q+  E  +   L + +YKD GF
Sbjct: 360 RMAEFGNCHRNEPSGALHGILRVRNFTQDDAHIFCTEDQVGQEAKEYFALQLGVYKDLGF 419

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           +KI VKL+ RP+ R+G+D  WD AE  ++  L        + +    L GEGAFYGPK E
Sbjct: 420 DKIAVKLALRPDVRLGTDETWDKAEESLRVAL------RANDLEFEELPGEGAFYGPKVE 473

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           + L DAIGR WQCGT+Q+DF LP R +A Y+     +  PVM+HRA+ GS+ERFIG+MIE
Sbjct: 474 FHLTDAIGRSWQCGTLQLDFQLPERLDASYIGQDGARHRPVMLHRAILGSLERFIGMMIE 533

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           ++ G  PLWL+P+Q +V TI S A  YAQ +A  L+   L +E D RNE IN K+REHS+
Sbjct: 534 HYAGKFPLWLAPVQVVVATIVSEADAYAQTVAETLRRAGLRVEADVRNEKINLKVREHSL 593

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
            K+P++++ G +EA + ++ +RR G    + ++L DA+  L  E+  P
Sbjct: 594 AKVPVMLVVGAREAEQGTVAVRRLGGKDQEVLALGDAVARLKDEARSP 641


>gi|83309439|ref|YP_419703.1| threonyl-tRNA synthetase [Magnetospirillum magneticum AMB-1]
 gi|123740560|sp|Q2WAI1|SYT_MAGMM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|82944280|dbj|BAE49144.1| Threonyl-tRNA synthetase [Magnetospirillum magneticum AMB-1]
          Length = 638

 Score =  717 bits (1850), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/647 (50%), Positives = 453/647 (70%), Gaps = 14/647 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           + +T PDG ++ F    TG DVA+ I   LAK A+A+ I+G++ DL+  + R+ ++ IIT
Sbjct: 2   VAITLPDGKVRQFDHPVTGLDVAKDIGPGLAKAALAITIDGEMKDLATLIDRDVNLSIIT 61

Query: 64  PEDPR-SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
            +  + +L ++RH  AH+MAEAV+ ++PE QV IGP IE+GFYYDF +  PF+ D+LA+I
Sbjct: 62  AKSGQDALELLRHDAAHVMAEAVKELYPETQVTIGPSIENGFYYDFARPTPFTPDDLAKI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M EI+ RD    ++    + A + FE   E YK EI+ SIPA + + LYRQG + DL
Sbjct: 122 EARMAEIVDRDEAITREEWDRDAAVKFFEDAGEKYKAEIIASIPADQKIGLYRQGNFIDL 181

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ ST ++ K FKLMK+AGAYWRGDS   ML RIYGTAW  ++EL  YL+ LEE+E
Sbjct: 182 CRGPHLPSTAKLGKAFKLMKLAGAYWRGDSRNEMLQRIYGTAWFDKKELDAYLHMLEEAE 241

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD 301
           KRDHR+L REM+LFH  E+ +G +FWH+KGW +++ + SYMRR+++ ++YEE+ TPQ++D
Sbjct: 242 KRDHRRLGREMELFHQQEEAAGSVFWHKKGWTLYRAVESYMRRRLEANNYEEVKTPQLVD 301

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             LW+ SGH D +  +MF +K  D+     R  A+KPMNCP HV +F  G+KSYR+LP+R
Sbjct: 302 FSLWEASGHADKFSESMFTIKTQDE-----RHLAVKPMNCPCHVQIFRQGIKSYRDLPLR 356

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AEFGS +R EPSG+LHG+MRVR FTQDDAH+FCT++Q+ +E +    L+  +Y DFGF 
Sbjct: 357 MAEFGSCHRYEPSGALHGIMRVRAFTQDDAHIFCTEDQITSETIAFCQLLKEVYTDFGFT 416

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + VK S RP KR GSD  WD AE+ +      ++ S    + T +  GEGAFYGPK E+
Sbjct: 417 DVRVKFSDRPAKRAGSDETWDKAESAL------LEASKAAGLETVLNPGEGAFYGPKLEF 470

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
           +L+DAIGRDWQCGT+QVDF LP R +A YV     K  PVM+HRA+ GS ERF+GI+IEN
Sbjct: 471 VLRDAIGRDWQCGTLQVDFVLPERLDAAYVAEDGAKKRPVMLHRAILGSFERFLGILIEN 530

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           F G  PLWL+P Q +V TI S A ++A+E+   LK+  L +E D RNE INYK+REHS+ 
Sbjct: 531 FAGRFPLWLAPTQVVVATIVSEADDFAREVEATLKAAGLRVELDLRNEKINYKVREHSVA 590

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
           K+P++++ G +EA  R + IRR GS   + V+L  A+  L  E+ PP
Sbjct: 591 KVPVMLVVGKREAESRQVAIRRLGSQNQEIVALDQAVATLAAEATPP 637


>gi|83594816|ref|YP_428568.1| threonyl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170]
 gi|123753041|sp|Q2RNL4|SYT_RHORT RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|83577730|gb|ABC24281.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Rhodospirillum
           rubrum ATCC 11170]
          Length = 643

 Score =  712 bits (1838), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 318/649 (48%), Positives = 450/649 (69%), Gaps = 14/649 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           + ++ PDGS++++    TG  +AE I   LAK A+AV I+G + DLS P+  + S+ +IT
Sbjct: 2   VAISLPDGSVRSYEGPVTGRQIAEDIGPGLAKAALAVTIDGTMKDLSVPITTDASVSLIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
             D  +L ++RH  AH+MA+AVQ ++P  QV IGP IE+GFYYDF + +PF+ ++L +IE
Sbjct: 62  ARDAAALELLRHDAAHVMAQAVQELYPGTQVTIGPAIENGFYYDFARAEPFTPEDLERIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           ++M+EI+ RD P +++    ++A   F    E YK E++  +PA E+V++YRQG+W DLC
Sbjct: 122 ERMREIVGRDLPIVREVWERDEAIAYFTKLGETYKAELITGLPANEDVSVYRQGDWLDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG++   FKLMK+AGAYWRGDS  PML RIYGTAW  +++L  YL  L E+EK
Sbjct: 182 RGPHLPSTGKLGTAFKLMKLAGAYWRGDSRNPMLQRIYGTAWPDRKQLDAYLTMLAEAEK 241

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQ 302
           RDHR++ +EMDLFH+ E+  G +FWH KGW +++TL +YMRR++    Y E+NTP ++D+
Sbjct: 242 RDHRRVGQEMDLFHLQEEAQGAVFWHPKGWTVYRTLQNYMRRRLDLAGYVEVNTPMLVDR 301

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHW+ +R NMF  +  D      +  A+KPMNCP H+ +F  G+KSYR+LP+R+
Sbjct: 302 ALWEKSGHWEKFRQNMFISEAED------KLLAMKPMNCPCHIQIFKQGIKSYRDLPLRM 355

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFG+ +RNE SG+LHGLMRVR F QDDAH+FCT++Q+ +E     +L+ S+Y+D GF +
Sbjct: 356 AEFGACHRNEASGALHGLMRVRAFVQDDAHIFCTEDQIVSETQAFCDLLKSVYRDLGFTE 415

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I VK S RPE R GSD  WD AE  ++   D         +   +  GEGAFYGPK E++
Sbjct: 416 IKVKFSDRPEVRAGSDETWDKAEAALREATDAAG------LEWTLNPGEGAFYGPKLEFV 469

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+DAIGRDWQCGT+QVDF LP R  A YV    +K  PVM+HRA+ G+ ERF+GI+IEN 
Sbjct: 470 LRDAIGRDWQCGTLQVDFVLPERLGADYVGEDGDKHRPVMLHRAILGTFERFMGILIENC 529

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P+Q +V TITS A +YA+ +   LK+  L    D RNE INYK+REHS+ K
Sbjct: 530 AGRFPFWLAPVQVVVATITSDADDYARTVLAALKAKGLRAVADLRNEKINYKVREHSLAK 589

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           +P++++ G KEA    + +RR G  + + ++L +AI  L  ES+ PD +
Sbjct: 590 VPVMLVVGRKEAETGGVALRRLGGQSQEVLALDEAIATLANESVAPDLR 638


>gi|288959315|ref|YP_003449656.1| threonyl-tRNA synthetase [Azospirillum sp. B510]
 gi|288911623|dbj|BAI73112.1| threonyl-tRNA synthetase [Azospirillum sp. B510]
          Length = 650

 Score =  712 bits (1837), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/650 (51%), Positives = 459/650 (70%), Gaps = 12/650 (1%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
           M S+I +T PDGS++ F    TG ++A+SI   LAK A+AV I+G V DL+  V   + I
Sbjct: 1   MTSNIAITLPDGSVREFDRPVTGLEIAQSIGSRLAKDALAVKIDGTVKDLTTTVTTNARI 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EI+T     +L VIRH  AH++A+AVQ ++P  QV IGP I  GFYYDF +++PF+ ++L
Sbjct: 61  EIVTRNHGDALEVIRHDAAHVLADAVQKLYPGTQVTIGPSIATGFYYDFARDEPFTPEDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IE KM+E++A D P L++    ++A   F+   E YK E++E+IP  E V++YRQG+W
Sbjct: 121 EKIEAKMRELVAADIPILREVWDRDEAIAYFKKLGEHYKAELIETIPQGEPVSVYRQGDW 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPH  +TG+V + FKLMKVAGAYWRGDS  PML RIYGTAW  ++EL  YL+ +E
Sbjct: 181 LDLCRGPHAMTTGKVGQGFKLMKVAGAYWRGDSRNPMLQRIYGTAWRDEKELKAYLHQIE 240

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+EKRDHRKL +E+DLFH+ E+  G +FWH KGW +++TL +Y+R K+K  DY E+ TPQ
Sbjct: 241 EAEKRDHRKLGKELDLFHVQEEAVGSVFWHPKGWTLYRTLETYIRTKLKAADYVEVKTPQ 300

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D  L++ SGHWD Y  NMF V+ AD   K L    +KPMNCPGHV +F +GL+SYR+L
Sbjct: 301 LIDSSLFKASGHWDMYGDNMFKVE-ADGGEKLL---GIKPMNCPGHVQIFRNGLRSYRDL 356

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG+ +RNEPSG+LHG+MRVR FTQDDAH+FCT++Q+ +E  +   L + +YKD 
Sbjct: 357 PIRMAEFGACHRNEPSGALHGIMRVRAFTQDDAHIFCTEDQVQSEAAEYFKLQLGVYKDL 416

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF++I VKL+ RP+ R G+D LWD AE  +   L       ++      L GEGAFYGPK
Sbjct: 417 GFDQISVKLALRPDVRTGADELWDRAEGALAQALRDAGLEYEE------LPGEGAFYGPK 470

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ L DAIGR WQCGT+Q D NLP R +A Y+     +  P+M+HRA+ GS+ERFIG++
Sbjct: 471 VEFHLTDAIGRTWQCGTLQYDPNLPERLDASYIGEDGARHRPIMLHRAILGSMERFIGML 530

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE++ G  PLWLSP+Q  V TITS A +YA E+A LLK   L +E D RNE IN K+REH
Sbjct: 531 IEHYAGKFPLWLSPVQVTVATITSEADDYAVEVAKLLKRKGLRVELDTRNEKINLKVREH 590

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
           S++K+P++++ G +EA ER++ +R  G    + ++L DA+  L +++  P
Sbjct: 591 SLQKVPLMLVVGKREAEERTVALRVLGGKDQEILALDDAVAKLIEDAKSP 640


>gi|296117435|ref|ZP_06836023.1| threonyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769]
 gi|295976037|gb|EFG82827.1| threonyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769]
          Length = 642

 Score =  711 bits (1835), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 320/654 (48%), Positives = 455/654 (69%), Gaps = 15/654 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP+   +T PDGS++ F    TG+ VA+SI   LA+ A+A+ ++G + D+   +  +  +
Sbjct: 1   MPA---ITLPDGSVRRFDGAVTGTTVAQSIGAGLARAALAMEVDGHLMDIGREIDHDAHV 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
             +T +D  SL +IRH  AH++AEAVQS+WP  QV IGP IE+GFYYDF + +PF+ ++ 
Sbjct: 58  RFVTRKDAESLEMIRHDAAHVLAEAVQSLWPGTQVTIGPSIENGFYYDFYRNEPFTPEDF 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IE +M+EI+  ++PF ++    E+A   FE + E +K E++  +P  E +++YRQGEW
Sbjct: 118 PRIEARMREIVDANAPFTRETWPREEAIRFFEERGERFKAELIRDLPEDEEISIYRQGEW 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPH+R TG + K F+LMKVAGAYWRGD   PML+RIYGTAW  Q+EL  +++ LE
Sbjct: 178 LDLCRGPHLRGTGDIGKAFRLMKVAGAYWRGDHRNPMLTRIYGTAWRDQKELDAHIHQLE 237

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+E+RDHR++ REM LFHI E+  G IFWH KGW+++  L  YMRR + ++ Y+E+ TPQ
Sbjct: 238 EAERRDHRRIGREMGLFHIQEEAVGQIFWHPKGWRLYSVLQDYMRRAQTRNGYQEVRTPQ 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D+ LW+ SGHWD YR +MF     D+     +T ALKPMNCP HV +F HGL+SYREL
Sbjct: 298 LVDRGLWEASGHWDKYRQHMFIATVEDED----KTLALKPMNCPCHVQIFRHGLRSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG+ +R EPSG+LHG+MRVRGFTQDDAH+FCT+EQ+ +E  +   ++ ++Y+D 
Sbjct: 354 PLRMAEFGACHRYEPSGALHGIMRVRGFTQDDAHIFCTEEQIADETARFVRMLSAVYQDL 413

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE   VK + RPE+R GSD  WD +EN +K          +         GEGAFYGPK
Sbjct: 414 GFEHFRVKFADRPEQRAGSDDTWDRSENALKEACHMAGVEYEHNP------GEGAFYGPK 467

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E++L+DAIGRDWQCGT+QVD+ +P R +A YV   S +  PVM+HRA+ GS ERF+GI+
Sbjct: 468 LEFVLRDAIGRDWQCGTLQVDYVMPERLDATYVGEDSARHRPVMLHRAILGSFERFLGIL 527

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE   G  P+WL+P+Q +V +I + A  YA+E+   L++  + +E D RNE IN KIREH
Sbjct: 528 IEQHAGRFPMWLAPVQVVVASIVTDAEPYAREVVEKLQAAGVVVEADVRNEKINAKIREH 587

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           S+ ++P+I++ G KEA ER++ +RR G    + V L +A+  L  E+ PPD ++
Sbjct: 588 SLARVPVILVVGRKEAEERTVALRRLGGKAQEIVPLDEAVTALAHEATPPDLRR 641


>gi|154253109|ref|YP_001413933.1| threonyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1]
 gi|189083615|sp|A7HWJ3|SYT_PARL1 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|154157059|gb|ABS64276.1| threonyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1]
          Length = 652

 Score =  710 bits (1833), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 331/657 (50%), Positives = 447/657 (68%), Gaps = 16/657 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           IKL  PDGS++   V   G   AESI++SLAKKAVA+ I+G++ DLS  + R+  +EI+T
Sbjct: 2   IKLKLPDGSVREHEVPLDGLAFAESIAKSLAKKAVAIKIDGQMKDLSTVIDRDAEVEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            E P  + ++RH  +H+MAEAVQ ++P  QV IGP+IE+GFYYDF + +PF +++L +IE
Sbjct: 62  RETPDGVDLLRHDASHVMAEAVQELFPGTQVTIGPVIENGFYYDFARAEPFKAEDLEKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           ++M+EI+ RD    ++    + A E F+   E YK EI+ SIPA E V++YRQG W DLC
Sbjct: 122 QRMREIVDRDETITREVWDRDAAVEYFKKIGEIYKAEIIASIPAGEQVSVYRQGNWLDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG++ K FKL K+AGAYWRGDS   ML RIYGT W  + +L  YL  +EE+E+
Sbjct: 182 RGPHLPSTGKLGKAFKLTKLAGAYWRGDSRNEMLQRIYGTCWANENDLKAYLTMVEEAER 241

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQ 302
           RDHRK+ REMDLFH+ E+  G +FWH KGW+I+Q L  Y+RR+I    Y E+ TPQ+LD 
Sbjct: 242 RDHRKIGREMDLFHLQEEAQGSVFWHPKGWRIWQALEQYVRRRIDAAGYVEVRTPQLLDS 301

Query: 303 HLWQQSGHWDSYRANMFA----VKCADDTIKDL----RTFALKPMNCPGHVAVFNHGLKS 354
             W+QSGHW  YR NMF     V   D+    L    +  A+KPMNCP H+ +F  G+KS
Sbjct: 302 KFWEQSGHWGKYRENMFVVPDEVPSTDEDAPVLSGKAKLMAIKPMNCPAHIQIFKQGVKS 361

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YR+LP+R+AEFG  +RNEP G+LHGLMRVR  TQDDAH+FCT++Q+  E      L+ S+
Sbjct: 362 YRDLPLRMAEFGCCHRNEPHGALHGLMRVRQMTQDDAHIFCTEDQIKEETEAFVALLESV 421

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           Y+D GF    ++L+TRP+ R G+D  WD AE  ++  L  +              GEGAF
Sbjct: 422 YEDMGFTGTKLRLATRPDVRAGTDETWDKAEKALEEALKALGKEFD------FAPGEGAF 475

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK E+ L+DAIGR WQ GT+Q+DF LP R +A Y+     K  PVM+HRA+ GS+ERF
Sbjct: 476 YGPKLEFHLRDAIGRSWQLGTLQLDFVLPERLDASYIGEDGNKHRPVMLHRAILGSLERF 535

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
           IGI+IEN++G  P+WL+P+QA+VTTITS A  YA+E+   L+   +  E D RNE INYK
Sbjct: 536 IGILIENYEGRFPMWLAPVQAVVTTITSDADPYAEEMLQKLRDAGIRAELDLRNEKINYK 595

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           +REHS+ K+P I + G +EA E ++ IRR GS   Q + L +AI  L +E+ PPD +
Sbjct: 596 VREHSVAKVPAIFVAGKREAEEGTVSIRRLGSQQQQTMKLDEAIKALAEEATPPDMR 652


>gi|254419068|ref|ZP_05032792.1| threonyl-tRNA synthetase [Brevundimonas sp. BAL3]
 gi|196185245|gb|EDX80221.1| threonyl-tRNA synthetase [Brevundimonas sp. BAL3]
          Length = 642

 Score =  709 bits (1830), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/650 (50%), Positives = 444/650 (68%), Gaps = 13/650 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           I L FPDG+++ +P  +T  DVA SIS SLAKKAV   +NG+  D+   +  G    +I 
Sbjct: 2   IDLKFPDGAVRQYPAGSTARDVATSISPSLAKKAVLAELNGEQRDMGRVLETGGDFRLIM 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +DP +L  IRH  AH++AEAVQ+++P  QV IGP IEDGFYYDF +++PFS+D+ A IE
Sbjct: 62  RDDPAALYTIRHDTAHVLAEAVQTLFPGTQVTIGPAIEDGFYYDFFRDEPFSTDDFAAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M  I+ RD+ F ++    ++A   FE++ E +K E+++ +P  E +TLY+QG+W DLC
Sbjct: 122 KEMGRIVDRDAKFEREVWDRDEAIVFFEARGEKFKAELIKDLPENETITLYKQGDWIDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH  ST  V K FKL K+AGAYWRGDS R  L RIYGTAW T+++L  YL  LEE+EK
Sbjct: 182 RGPHFPSTRHVGKAFKLTKLAGAYWRGDSKREQLQRIYGTAWATKEDLDAYLQRLEEAEK 241

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQ 302
           RDHRK+ + M+LFH+ E+G G++FWH KGW +++ L +YMRR++    Y E+ TPQVLD+
Sbjct: 242 RDHRKVGKAMELFHMQEEGRGMVFWHPKGWILWRVLEAYMRRRLDAAGYVEVKTPQVLDR 301

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             W+QSGHWD YR NMF  +  +       T +LKPMNCPGHV +F+ G +SYRELP+R+
Sbjct: 302 KFWEQSGHWDKYRPNMFVCETVEG-----ETLSLKPMNCPGHVQIFDQGQRSYRELPLRM 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFG+ +R EPSGSLHGLMRVRGFTQDDAH+FC ++Q+  E  +   L  S++ D G E 
Sbjct: 357 AEFGACHRYEPSGSLHGLMRVRGFTQDDAHIFCREDQIVEETAEFIKLARSVHADLGMET 416

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             + L TRPE R GSD  WD      K      + +        V  G+GAFY PK ++I
Sbjct: 417 AYISLGTRPENRAGSDEFWD------KAEALMAEAARAAGTEPVVTEGDGAFYAPKLDFI 470

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDAIGR+W CGTIQ+D+ LP R +A Y+    +K  PVM+HRA+ GS ERFIGIMIEN+
Sbjct: 471 VKDAIGREWTCGTIQLDYVLPERLDATYIAEDGQKHRPVMLHRAILGSFERFIGIMIENY 530

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  PLWL+P QA+V TITS A +YA+++    K+  L  E D RNE + YK+REHS+ K
Sbjct: 531 AGAFPLWLAPTQAVVATITSDADDYARDVMARFKAAGLRTEIDLRNEKVGYKVREHSVGK 590

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           +P+I + G +EA +  + IRR GS     V++ +AI ILT E+ PPD ++
Sbjct: 591 VPVIAVVGRQEAEQGLVAIRRLGSQAQTVVTVEEAIRILTDEATPPDLKR 640


>gi|159043329|ref|YP_001532123.1| threonyl-tRNA synthetase [Dinoroseobacter shibae DFL 12]
 gi|189083606|sp|A8LQX9|SYT_DINSH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|157911089|gb|ABV92522.1| threonyl-tRNA synthetase [Dinoroseobacter shibae DFL 12]
          Length = 654

 Score =  709 bits (1829), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/651 (50%), Positives = 448/651 (68%), Gaps = 10/651 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
           + I LTFPDG+ ++F    T ++VA SIS SL KKA++  +NG   DL  P+  + SI I
Sbjct: 2   AQISLTFPDGNARDFDAGVTPAEVAASISTSLGKKAISATVNGAHHDLQWPIDADASIAI 61

Query: 62  IT-PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            T  +D ++L +IRH CAHIMA AVQ IWP+V+V IGP+IE+GFYYDFD+ +PF+ ++L 
Sbjct: 62  HTLKDDAQALELIRHDCAHIMARAVQEIWPDVKVTIGPVIENGFYYDFDRAEPFTPEDLG 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IE KM+EII    P   +     +A   +E+  E YKVE++E+IP  E + +Y  G+W 
Sbjct: 122 AIEAKMKEIINARDPVRTEVWDRPRAIAHYEANGEPYKVELIEAIPGNEPLRMYWHGDWQ 181

Query: 181 DLCRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           DLCRGPH++ TGQV    FKLM VAGAYWRGDS+RPML RIYG A+  +  L ++L+ LE
Sbjct: 182 DLCRGPHLQHTGQVPADSFKLMSVAGAYWRGDSSRPMLQRIYGVAFQNRDALKKHLHMLE 241

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQ 298
           E+ KRDHRKL REM+LFH+ E+  G +FWH  GW ++ TL  YMRR+ +++ Y E+NTPQ
Sbjct: 242 EAAKRDHRKLGREMNLFHMQEEAPGQVFWHPNGWTVYTTLQDYMRRRQRENGYVEVNTPQ 301

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW+ SGHWD Y+ NMF V+  ++  ++    ALKPMNCP HV V+N GLKSYR+L
Sbjct: 302 VVDRKLWEASGHWDKYQENMFIVEVDEEHAREKAINALKPMNCPCHVQVYNQGLKSYRDL 361

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG+  R EPSG+LHGLMRVRGFTQDDAH+FCT++Q+ +E  +   ++ +IY+D 
Sbjct: 362 PLRMAEFGACNRYEPSGALHGLMRVRGFTQDDAHIFCTEDQIQDETARFIRMLSTIYRDL 421

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE   +K STRPE R GSDA+WD AE  ++  + T+ +  +      +  GEGAFYGPK
Sbjct: 422 GFESFDIKFSTRPEVRAGSDAVWDKAEAALEAAIRTVTDDFE------LDPGEGAFYGPK 475

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++ L DAIGR+WQ GT Q DF LP R +A Y+     K  PVM+HRA+ GS ERF+GI+
Sbjct: 476 LDFKLTDAIGREWQLGTFQADFVLPERLDATYIGEDGAKHRPVMLHRAILGSFERFLGIL 535

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IENF G LP WL+P Q +V +I S A +Y +E+   L    +  E D RNE INYK+REH
Sbjct: 536 IENFAGKLPFWLAPRQVVVASIISEADDYVREVVAALTRAGIRAEADIRNEKINYKVREH 595

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPD 649
           S+ K+P+I+  G +E  ER++ +RR G   T  V L   +  L  E+ PPD
Sbjct: 596 SVGKVPVILAVGRREMEERTVTLRRLGEKQTSVVGLDALVADLAAEATPPD 646


>gi|254468875|ref|ZP_05082281.1| threonyl-tRNA synthetase [beta proteobacterium KB13]
 gi|207087685|gb|EDZ64968.1| threonyl-tRNA synthetase [beta proteobacterium KB13]
          Length = 652

 Score =  709 bits (1829), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 326/620 (52%), Positives = 444/620 (71%), Gaps = 15/620 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           IK+T PDGSIK F    T SDVA  I   L + A+A  ++GK+ DL+  +  + ++ I+T
Sbjct: 19  IKITLPDGSIKEFENTITLSDVAYDIGEGLGRAALAGHVDGKLVDLTHEITSDAAVSIVT 78

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            ++   L +IRHS AH++A AV+ ++PE QV IGP I+DGFYYDF   + F+ ++L+ IE
Sbjct: 79  AKNDEGLDIIRHSTAHLLAYAVKELFPEAQVTIGPTIDDGFYYDFSYHRAFTPEDLSAIE 138

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           KKM E++  D    ++ +  + A + F  + E YK EI+ SIP  E VT+Y +G++ DLC
Sbjct: 139 KKMAELVKEDHAVTREVMKRDDAVKFFLDQGEKYKAEIIGSIPQDEEVTVYHEGKFSDLC 198

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV STG++K  FKLMKVAGAYWRGDSN  ML RIYGTAW T+ +L  YL+ LEE+EK
Sbjct: 199 RGPHVPSTGKLK-VFKLMKVAGAYWRGDSNNEMLQRIYGTAWATKDDLKDYLHRLEEAEK 257

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL + +DLFHI ++  G++FWH KGW ++Q + +YMR+K  D  Y+EI TP VLD+
Sbjct: 258 RDHRKLGKHLDLFHIQDNAPGMVFWHAKGWSLWQEIENYMRKKFVDYGYQEIKTPTVLDK 317

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHW++Y  NMF       T  + R +A+KPMNCPGHV +FNH L SYRELP+RL
Sbjct: 318 TLWEKSGHWENYHENMFI------THSEHRDYAVKPMNCPGHVQIFNHSLHSYRELPLRL 371

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT++Q+ +E +  + +++  YKDFGF  
Sbjct: 372 AEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEDQILDEVINFNKMLMETYKDFGFND 431

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I VKLSTRPEKRVGSD +WD +E  ++  L          ++  +  GEGAFYGPK EY+
Sbjct: 432 IEVKLSTRPEKRVGSDEVWDQSEKALEEALKATG------LDYEIQPGEGAFYGPKIEYV 485

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+D++ R WQCGTIQ+DFNLP R NA YV+ +S K HPVM+HRA+ GS+ERFIGI+IE++
Sbjct: 486 LRDSLNRLWQCGTIQLDFNLPVRLNAEYVDENSNKKHPVMLHRAIVGSMERFIGILIEHY 545

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P+QA+V  I+ S  +Y  ++ + LK + +  E+D RNE I YKIREHSI +
Sbjct: 546 AGKFPTWLAPVQAVVMNISDSQAKYVGDVVDFLKKNDIRCESDLRNEKITYKIREHSISR 605

Query: 603 IPIIIICGDKEASERSIGIR 622
           IP +++ GD+E   + + +R
Sbjct: 606 IPFMLVIGDREMQNKQVAVR 625


>gi|119383706|ref|YP_914762.1| threonyl-tRNA synthetase [Paracoccus denitrificans PD1222]
 gi|166225473|sp|A1B0M2|SYT_PARDP RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|119373473|gb|ABL69066.1| Ser-tRNA(Thr) hydrolase [Paracoccus denitrificans PD1222]
          Length = 648

 Score =  709 bits (1829), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 338/653 (51%), Positives = 456/653 (69%), Gaps = 10/653 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           S I LTFPDG+ +++P   T ++VA SI+ SLAK A++ +++G+  DL  P+   G I I
Sbjct: 2   SQISLTFPDGNARDYPAGVTAAEVAASIAPSLAKNAISASLDGQHIDLQWPIAASGRIAI 61

Query: 62  ITPEDPR-SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            T +D   +L +IRH  AHIMA AVQ +WP+V+V IGP+ + G++YDFD+ +PF+ ++L 
Sbjct: 62  NTMKDSEPALELIRHDLAHIMARAVQELWPDVKVTIGPVRDQGWFYDFDRAEPFTPEDLG 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IE++M++IIA   P   +    ++AR  +E++ E +K+E+L+ IP  E + +Y  G+W 
Sbjct: 122 AIEQRMKQIIAARDPVRTEVWDRDRARAHYEAQGEPFKIELLDRIPEGEPIRMYWHGDWQ 181

Query: 181 DLCRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           DLCRGPH++ TGQV    FKL  VAGAYW GD++RPML RIYG A+  + +L  +L  LE
Sbjct: 182 DLCRGPHLQHTGQVPADAFKLTHVAGAYWLGDASRPMLQRIYGVAFRNRDDLKAHLTMLE 241

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQ 298
           E+ KRDHRKL REM+LFH  E+  G++FWH  GW I++ L +YMRR+ I+ DY+EI TPQ
Sbjct: 242 EAAKRDHRKLGREMELFHFQEEAPGMVFWHPNGWSIYRELEAYMRRRLIRADYKEIKTPQ 301

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHW++YR NMF V+  ++  K+ R  ALKPMNCP HV V+N GLKSYR+L
Sbjct: 302 VVDRILWEKSGHWEAYRENMFIVEVDEEGAKEKRINALKPMNCPCHVQVYNQGLKSYRDL 361

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFGS +R EPSGS+HGLMRVRGF QDDAH+FCT++Q+  EC     L+ S+YKD 
Sbjct: 362 PLRLAEFGSCHRYEPSGSMHGLMRVRGFVQDDAHIFCTEDQIEAECAGFIGLLSSVYKDL 421

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFEK  +KLSTRP+ RVGSD +WD AE  +KG ++ +       +   V  G+GAFYGPK
Sbjct: 422 GFEKFDIKLSTRPDVRVGSDEIWDKAEAALKGAIEHLD------LPYEVNPGDGAFYGPK 475

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++ L DAIGR+WQCGT Q DFNLP R  A YV     K  PVM+HRAV GS ERFIGI+
Sbjct: 476 LDFKLTDAIGREWQCGTFQCDFNLPQRLEAEYVGEDGAKHMPVMLHRAVLGSFERFIGIL 535

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IEN+ G LPLWL+P Q +V +I S A +Y  E+   L++  L  E D RNE INYK+REH
Sbjct: 536 IENYSGKLPLWLAPRQVVVASIVSGADDYVHEVVAALRAAGLRAEADTRNEKINYKVREH 595

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           S+ K+P+I+  G KE  ERS+ IRR     ++   L  AI  L  E+ PPD +
Sbjct: 596 SVGKVPVIMAVGLKEVEERSVSIRRLDRQGSESHGLESAIATLRAEATPPDLR 648


>gi|332525938|ref|ZP_08402079.1| threonyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2]
 gi|332109489|gb|EGJ10412.1| threonyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2]
          Length = 635

 Score =  706 bits (1821), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/634 (51%), Positives = 453/634 (71%), Gaps = 15/634 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I++T PDGS + +P   T +DVA SI   LAK A+A  ++GK+ D S  + R+  + I+T
Sbjct: 2   IQITLPDGSRREYPAPLTVADVAASIGAGLAKAALAGRVDGKLVDTSYRIERDAQLAIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +DP +L +IRHS AH++A AV+ ++PE QV IGP +E+GFYYDF  ++PF+ ++LA IE
Sbjct: 62  EKDPDALELIRHSTAHLLAYAVKQLFPEAQVTIGPTVENGFYYDFAYKRPFTPEDLAAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M E+ A++ P +++ L  ++A   F+   E YK EI+ SIP+ E+V+LYR+G++ DLC
Sbjct: 122 KRMAELAAKNEPVVRRVLPRDEAVAYFKGLGEDYKAEIIGSIPSNEDVSLYREGDFEDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV STG++K F KLMKVAGAYWRGD N   L RIYGTAW T+ EL  YL  LEE+EK
Sbjct: 182 RGPHVPSTGRLKHF-KLMKVAGAYWRGDQNNEQLQRIYGTAWATKDELQGYLRMLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQ 302
           RDHRKL RE+DLFH+ E   G +FWH KGW ++Q +  YMRR  +D+ Y+E+  PQ+LD+
Sbjct: 241 RDHRKLGRELDLFHLDEHSPGTVFWHPKGWTVWQEVEQYMRRVYRDNGYQEVKGPQILDK 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+++GHWD YR NMF       T  + R +ALKPMNCPGH+ +F  G+KSYR+LP+R 
Sbjct: 301 ALWEKTGHWDKYRENMFT------TESEKRDYALKPMNCPGHILIFKQGIKSYRDLPLRY 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG  +RNEP+G LHG+MRVRGFTQDD H+FCT++ +  EC+    L+  +Y+DFGF  
Sbjct: 355 GEFGQCHRNEPTGGLHGIMRVRGFTQDDGHIFCTEDMILGECVAYTALLQKVYRDFGFTD 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+ K++TRPEKR+GSDA+WD AE   + +++++K S  D +   +  G+GAFYGPK EY 
Sbjct: 415 ILYKVATRPEKRIGSDAIWDKAE---EALIESLKRSGCDYV---IAPGDGAFYGPKIEYT 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LKDAIGR WQCGT+QVDF++  R +A YV     + HPVM+HRA+ GS+ERFIGI+IE  
Sbjct: 469 LKDAIGRQWQCGTMQVDFSMAERLDAEYVAEDGSRRHPVMLHRAIVGSLERFIGILIEQH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G LP+WL+P+QA+V +IT S  +YA E+A  L+   L +  D RNE INYKIREHS++K
Sbjct: 529 AGALPVWLAPVQAVVASITDSQADYAAEVAKSLQKQGLRVHLDLRNEKINYKIREHSVQK 588

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
            P I++ GDKE +  ++ +R  G+     + L D
Sbjct: 589 APFILVVGDKEKANGAVAVRARGNLDLGVMPLAD 622


>gi|99081562|ref|YP_613716.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Ruegeria sp.
           TM1040]
 gi|123077585|sp|Q1GFW2|SYT_SILST RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|99037842|gb|ABF64454.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Ruegeria sp.
           TM1040]
          Length = 648

 Score =  704 bits (1816), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/651 (50%), Positives = 448/651 (68%), Gaps = 10/651 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
           + I LTFPDG+ +++    T ++VA  IS SLAKKA++  ++G+  DL  PV ++ +I I
Sbjct: 2   AQISLTFPDGNARSYDAGITPAEVAADISTSLAKKAISATVDGQHWDLQWPVTQDAAIAI 61

Query: 62  ITPED-PRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            T +D  ++  +IRH  AHIMA AVQ IWP+ +V IGP+IE+G+YYDFD+ +PF+ ++L 
Sbjct: 62  HTMKDEAQANELIRHDLAHIMARAVQEIWPDTKVTIGPVIENGWYYDFDRAEPFTPEDLG 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEKKM+EII +  P   +    EKA + +    E YKVE+++SIP  E + +Y  G+W 
Sbjct: 122 TIEKKMKEIINKREPVTTEVWEREKAIQYYTDNNEPYKVELIDSIPGDEPLRMYWHGDWQ 181

Query: 181 DLCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           DLCRGPH++ TGQV    FKLM +AGAYWRGDS+R ML RIYG A+  +++L  +L  LE
Sbjct: 182 DLCRGPHLQHTGQVPGDAFKLMSIAGAYWRGDSDRQMLQRIYGVAFTGKEKLKAHLTMLE 241

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+ KRDHRKL REM+LFH+ E+  G +FWH  GW+I+ TL  YMRR + +D Y E+NTPQ
Sbjct: 242 EAAKRDHRKLGREMNLFHMQEEAPGQVFWHPNGWRIYTTLQDYMRRMQDRDGYVEVNTPQ 301

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHWD Y+ NMF V+  +D  ++    ALKPMNCP HV VFN GLKSYR+L
Sbjct: 302 VVDRKLWEKSGHWDKYQENMFIVEVDEDHAREKAVNALKPMNCPCHVQVFNQGLKSYRDL 361

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFGS  R EPSG+LHG+MRVRGFTQDD H+FCT++Q+ +E  K    +  +Y D 
Sbjct: 362 PLRMAEFGSCARYEPSGALHGIMRVRGFTQDDGHIFCTEDQITSETAKFIAFLSKVYADL 421

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+   +KLSTRPE+R+GSD  WD   N+ + + D  K +  D     +L GEGAFYGPK
Sbjct: 422 GFDNWTIKLSTRPEQRIGSDETWD---NMEQALGDACKAAGYD---YEILEGEGAFYGPK 475

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ L DAIGR+WQCGT+QVD NLP R  A ++     K  PVM+HRA  GS ERFIGI+
Sbjct: 476 LEFTLTDAIGRNWQCGTLQVDANLPERLEASFIGQDGSKHRPVMLHRATLGSFERFIGIL 535

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE   G LP WL+P Q +V +ITS A +Y  E+   L++  +  E D RNE INYK+REH
Sbjct: 536 IEEHAGKLPFWLAPRQVVVASITSEADDYVNEVVETLRAAGVRAEADTRNEKINYKVREH 595

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPD 649
           S+ K+P+I+  G +E  ER++ +RR G   T+  SL +    L K + PPD
Sbjct: 596 SVGKVPVILAVGHREVEERTVSVRRLGEKQTKVESLTNVTEELAKAATPPD 646


>gi|162147243|ref|YP_001601704.1| threonyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
 gi|209544293|ref|YP_002276522.1| threonyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
 gi|189083610|sp|A9HFP5|SYT_GLUDA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|161785820|emb|CAP55391.1| Threonyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
 gi|209531970|gb|ACI51907.1| threonyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
          Length = 641

 Score =  704 bits (1816), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 326/654 (49%), Positives = 450/654 (68%), Gaps = 15/654 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSI 59
           MP+   +T PDGS++ F    TG+ VAESI   LA+ A+A+ ++G + DLS  + +  S+
Sbjct: 1   MPA---ITLPDGSVRRFDGPVTGTMVAESIGPGLARAALAMEVDGALVDLSREIADDASV 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
             IT +D  +L +IRH  AH++AEAVQS+WP  QV IGP IE+GFYYDF + +PF+ ++ 
Sbjct: 58  RFITRKDDAALEMIRHDTAHVLAEAVQSLWPGTQVTIGPSIENGFYYDFYRNEPFTPEDF 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IE +M+EI+A ++ F ++    ++A   FE++ E +K E++  +P  E +++YRQGEW
Sbjct: 118 PAIEARMREIVAANARFEREVWPRDEAIRFFENRGERFKAELIRDLPESEPISIYRQGEW 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPH+R T  V   FKLMKVAGAYWRGD   PML+RIYGTAW  Q+EL  +L+ LE
Sbjct: 178 LDLCRGPHLRGTADVGSAFKLMKVAGAYWRGDHRNPMLTRIYGTAWRDQKELDAHLHRLE 237

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+E+RDHR++ REMDLFHI E+  G IFWH KGW+++  L  YMRR + +  Y+E+ TPQ
Sbjct: 238 EAERRDHRRIGREMDLFHIQEEAVGSIFWHPKGWRLYTALQDYMRRAQTRGGYQEVRTPQ 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D+ LW+ SGHWD YR +MF     D+     +T ALKPMNCP HV +F HGL+SYREL
Sbjct: 298 LVDRALWEASGHWDKYREHMFIATVEDED----KTLALKPMNCPCHVQIFRHGLRSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG+ +R EPSG+LHG+MRVR FTQDDAH+FCT+ Q+  E  +   ++  +Y D 
Sbjct: 354 PLRMAEFGACHRYEPSGALHGIMRVRSFTQDDAHIFCTESQIAAETARFVRMLAEVYADL 413

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE   VK + RPE+R GSD  WD AE  +      I+      +      GEGAFYGPK
Sbjct: 414 GFESFRVKFADRPEQRAGSDETWDRAEGAL------IEACRLAGVEYEYNPGEGAFYGPK 467

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E++L+DAIGRDWQCGT+QVD+ LP R +A +V   S +  PVM+HRA+ GS ERF+GI+
Sbjct: 468 LEFVLRDAIGRDWQCGTLQVDYVLPERLDASFVGEDSARHRPVMLHRAILGSFERFLGIL 527

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE   G  PLWL+P+Q +V +I + A  YA+++A  L    L +ETD RNE IN K+REH
Sbjct: 528 IEQHAGRFPLWLAPVQVVVASIVTDAAPYAEQVAETLTQAGLVVETDIRNEKINAKVREH 587

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           S+ ++P+I++ G KEA + ++ IRR G    + +SL DA   L  E+LPPD ++
Sbjct: 588 SLARVPVILVVGRKEAEDGTVAIRRLGGAAQEVMSLADAATALAAEALPPDLRR 641


>gi|114769524|ref|ZP_01447150.1| threonyl-tRNA synthetase [alpha proteobacterium HTCC2255]
 gi|114550441|gb|EAU53322.1| threonyl-tRNA synthetase [alpha proteobacterium HTCC2255]
          Length = 649

 Score =  703 bits (1815), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 340/655 (51%), Positives = 447/655 (68%), Gaps = 12/655 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIE-- 60
           S I +T PDG+++ +    TG D+A+ IS SLAKKA++ +ING  CDLS  V E  +E  
Sbjct: 2   SQISITLPDGNVRKYAAGITGMDIAKDISTSLAKKAISCSINGNHCDLSQ-VIENDVEFA 60

Query: 61  IITPED-PRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           I T  D  ++L +IRH CAHIMA AVQ IWP+VQV IGP+I++G+YYDFD+++PF+ ++L
Sbjct: 61  IFTMRDNDQALELIRHDCAHIMARAVQEIWPDVQVTIGPVIDNGWYYDFDRKEPFTPEDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           + IEKKM+EII    P  ++    E+A + +    E YKVE++ SIP  E++++Y  G W
Sbjct: 121 SIIEKKMREIINLKDPVRREVWDRERAIKHYTDTNEPYKVELINSIPGDEDLSMYWHGYW 180

Query: 180 FDLCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
            DLCRGPH+  T QV    FKLM VAGAYWRGDSN  ML RIYG A+  + +L  +L  L
Sbjct: 181 QDLCRGPHLVHTAQVPGDSFKLMSVAGAYWRGDSNNAMLQRIYGVAFQNKNDLKAHLTML 240

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTP 297
           EE+  RDHRKL REMDLFH+ E+  G IFWH  GWKI+  L  YMRR + K+ Y E+NTP
Sbjct: 241 EEAALRDHRKLGREMDLFHMQEEAPGQIFWHPNGWKIYTALQDYMRRMQDKNGYVEVNTP 300

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           QV+D+ LW+ SGHW+ Y+ NMF V+  +D  ++    ALKPMNCP HV +FN GLKSYR+
Sbjct: 301 QVVDRKLWEASGHWEKYQENMFIVEVDEDHAREKAVNALKPMNCPCHVQIFNQGLKSYRD 360

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS  R EPSG+LHG+MRVRGFTQDD H+FC++EQ+ +E     + + ++YKD
Sbjct: 361 LPLRMAEFGSCNRYEPSGALHGIMRVRGFTQDDGHIFCSEEQIESETKIYIDFLSNVYKD 420

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
            GF +  VK S RPEKR GSD +WD AE   K +L   + +    I   + +GEGAFYGP
Sbjct: 421 LGFNEFKVKFSDRPEKRSGSDEVWDKAE---KALLSATRAAG---IEPELNIGEGAFYGP 474

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E++L DAIGRDWQCGT QVDF LP R +A Y+    +K  PVM+HRA  GS ERFIGI
Sbjct: 475 KLEFVLTDAIGRDWQCGTHQVDFVLPERLDASYIGKDGDKHRPVMLHRATLGSFERFIGI 534

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE+  G LP WL+P Q +V +I S A +Y  E    L +  +  E D RNE INYK+RE
Sbjct: 535 LIESHAGKLPFWLAPRQVVVASIVSDANDYVLEKVAALNTAGIRAEADIRNEKINYKVRE 594

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           HS+ K+P+I+  G +E  E ++ +RR G   T+     D I IL+ ES PPD +K
Sbjct: 595 HSLGKVPVILAVGAREVEEDTVTVRRLGQKQTEVNQFNDIIAILSSESTPPDLRK 649


>gi|254511025|ref|ZP_05123092.1| threonyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11]
 gi|221534736|gb|EEE37724.1| threonyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11]
          Length = 652

 Score =  702 bits (1811), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 335/649 (51%), Positives = 445/649 (68%), Gaps = 10/649 (1%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           + LTFPDG+ +++    T + VA  IS SLAKKA++  +NG+  DL  P+  +  I I T
Sbjct: 8   VSLTFPDGNARSYDAGVTPAQVAADISTSLAKKAISATVNGQHWDLQWPIEADAQIAIHT 67

Query: 64  PED-PRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
            +D  ++  +IRH  AHIMA AVQ IWP+ +V IGP+IE+G+YYDFD+ +PF+ ++L QI
Sbjct: 68  MKDEAQANELIRHDLAHIMARAVQEIWPDTKVTIGPVIENGWYYDFDRAEPFTPEDLGQI 127

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EKKM+EII +  P   +    ++A + + +  E YKVE++++IP  E + +Y  G+W DL
Sbjct: 128 EKKMKEIINKRDPVTTEVWDRQRAIDFYTANNEPYKVELIDAIPGDEPLRMYWHGDWQDL 187

Query: 183 CRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           CRGPH++ TGQV    FKLM +AGAYWRGDS+R ML RIYG A+  +++L  +L+ LEE+
Sbjct: 188 CRGPHLQHTGQVPGDAFKLMSIAGAYWRGDSDRAMLQRIYGVAFTGKEKLKAHLHMLEEA 247

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
            KRDHRKL REMDLFH+ E+  G IFWH  GWKI+ TL  YMRR + +D Y E+NTPQV+
Sbjct: 248 AKRDHRKLGREMDLFHMQEEAPGQIFWHPNGWKIYTTLQDYMRRMQDRDGYVEVNTPQVV 307

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D+ LW+ SGHWD Y+ NMF V+  ++  ++    ALKPMNCP HV VFN GLKSYR+LP+
Sbjct: 308 DRKLWEASGHWDKYQENMFIVEVDEEHAREKAINALKPMNCPCHVQVFNQGLKSYRDLPL 367

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AEFGS  R EPSG+LHG+MRVRGFTQDD H+FC+++Q+ +E  K    +  +Y D GF
Sbjct: 368 RMAEFGSCNRYEPSGALHGIMRVRGFTQDDGHIFCSEDQIESETAKFIAFLSKVYADLGF 427

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
               +KLSTRPEKR+GSD  WD  E   K + D  K +  D     VL GEGAFYGPK E
Sbjct: 428 HDWTIKLSTRPEKRIGSDESWDIVE---KALGDACKAAGYD---YEVLEGEGAFYGPKLE 481

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           + L DAIGRDWQCGT+QVD NLP R +A ++ +   K  P M+HRA  GS ERFIGI+IE
Sbjct: 482 FTLTDAIGRDWQCGTLQVDPNLPERLDANFIGADGAKHRPFMLHRATLGSFERFIGILIE 541

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              G LP WL+P Q +V +ITS A +Y  E+ + LK+  +  E D RNE INYK+REHS+
Sbjct: 542 EHAGKLPFWLAPRQVVVASITSEADDYVMEVVDTLKAAGIRAEADIRNEKINYKVREHSV 601

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPD 649
            K+P+I+  G +E  ER++ IRR G   TQ  SL      L+  + PPD
Sbjct: 602 SKVPVILAVGHREVEERTVTIRRLGEKQTQVQSLETVTNELSLAATPPD 650


>gi|114328278|ref|YP_745435.1| threonyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1]
 gi|122326764|sp|Q0BRP0|SYT_GRABC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|114316452|gb|ABI62512.1| threonyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1]
          Length = 642

 Score =  701 bits (1809), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 325/655 (49%), Positives = 450/655 (68%), Gaps = 16/655 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP+   +T PDGS++++    TG+ +A  I   LA+ A+A+ ++G++ DLS  +  +  +
Sbjct: 1   MPA---ITLPDGSVRHYDAPVTGTTIAADIGPGLARAALAMKVDGRMMDLSRAIAADAQV 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
             +T +D  +L +IRH  AH++AEAVQ ++P  QV IGP IE+GFYYDF + +PF+ ++L
Sbjct: 58  VFVTRKDEAALEMIRHDAAHVLAEAVQELFPGTQVTIGPSIENGFYYDFARNEPFTPEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IE KM+EIIAR++PF ++    + A   F+ K E YK ++++ +P  E +T+YRQGEW
Sbjct: 118 PAIEAKMREIIARNAPFEREVWDRQDAIRFFQDKGEKYKAQLIQDLPDTETITVYRQGEW 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPH+RSTG +   F+LMKVAGAYWRGD    MLSRIYGTAW  Q+EL  YL+ LE
Sbjct: 178 LDLCRGPHMRSTGDIGPAFRLMKVAGAYWRGDHRNAMLSRIYGTAWRDQKELDAYLHQLE 237

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQ 298
           E+E+RDHR+L +EMDLFHI E+  G IFWH+KGW++++ L +YMRR+ I+  YEE+ TPQ
Sbjct: 238 EAERRDHRRLGKEMDLFHIQEEAVGSIFWHKKGWRLYRALENYMRRRQIEAGYEEVRTPQ 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D+ LW+ SGHWD YR +MF     D+     +T ALKPMNCP HV +F HGL+SY+EL
Sbjct: 298 LVDRSLWEDSGHWDKYREHMFIATVEDEE----KTLALKPMNCPCHVQIFRHGLRSYKEL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG+ +R EPSG+LHG+MRVR FTQDDAH+FC  EQ+  E      ++ S+Y+D 
Sbjct: 354 PLRMAEFGACHRYEPSGALHGIMRVRSFTQDDAHIFCMPEQIAKETADFVAMLASVYRDL 413

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+   VK + RPE R G D  WD AE+ ++             +   +  GEGAFYGPK
Sbjct: 414 GFDSFRVKFADRPESRAGKDEDWDRAEHELREACRLAG------VEYELNPGEGAFYGPK 467

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E++L+DAIGRDWQCGT+QVD+ LP R NA YV     +  PVM+HRA+ GS ERFIGI+
Sbjct: 468 LEFVLRDAIGRDWQCGTLQVDYVLPERLNAEYVAEDGARRRPVMLHRAILGSFERFIGIL 527

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLS-IETDFRNETINYKIRE 597
           IE + G  PLWL+P+  +V  I S A  YA E+   LK   ++  E D RNE IN KIRE
Sbjct: 528 IEQYAGRFPLWLAPVPVVVAPIVSDANAYAMEVVTALKRAGVTWAEADLRNEKINAKIRE 587

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           HS+  +P+I++ G +EA +R + +RR GS   Q ++L +AI  L  E+ PPD ++
Sbjct: 588 HSLAHVPVILVVGRREAEQRQVALRRLGSQEQQVMALDEAISALATEATPPDLRQ 642


>gi|114570943|ref|YP_757623.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Maricaulis
           maris MCS10]
 gi|122315357|sp|Q0AM08|SYT_MARMM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|114341405|gb|ABI66685.1| Ser-tRNA(Thr) hydrolase [Maricaulis maris MCS10]
          Length = 644

 Score =  701 bits (1808), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/652 (50%), Positives = 449/652 (68%), Gaps = 14/652 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           I +T PDGS +  P  A+  D+A  IS+SLAK A+   ++G+  DL  P+  +  + IIT
Sbjct: 2   INVTLPDGSKRELPDGASPLDLAADISKSLAKAAIIATVDGQDWDLKRPLDGDAQVAIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D ++L VIRH  AHI+A+AVQ ++P  QV IGP IEDGFYYDF + +PF+ ++   IE
Sbjct: 62  RKDDKALEVIRHDTAHILAQAVQDLFPGTQVTIGPAIEDGFYYDFARSEPFTPEDFEAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M EI+  D PF ++      A   FE   EAYK E++  +P  E +T+YRQGEWFDLC
Sbjct: 122 KRMGEIVDADLPFEREVWDRNDAIAKFEEMGEAYKAELIRDLPEDETITIYRQGEWFDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+ STG++ K FKLMKVAGAYWRGD    ML RIYGTAW   ++L  +L+ +EE+EK
Sbjct: 182 LGPHLPSTGKIGKAFKLMKVAGAYWRGDHRNAMLQRIYGTAWADDKQLKAHLHRIEEAEK 241

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQ 302
           RDHRKL ++M+LFH  E+  G +FWH  GW++++T+ SYMRR+++   Y EI TPQ++D+
Sbjct: 242 RDHRKLGKQMELFHFQEEAQGQVFWHPNGWRLYRTVTSYMRRRLEAAGYVEIRTPQLMDR 301

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             W+ SGHWD YR NMF +   D   ++ +  A+KPMNCP HV VFN G KSYR+LP+R+
Sbjct: 302 KFWEASGHWDKYRENMF-ISSID---QEEKVLAVKPMNCPCHVQVFNQGQKSYRDLPLRM 357

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +R EPSGSLHGLMRVRGF QDDAH+FCT +Q+  E      L+ S+Y DFGFE+
Sbjct: 358 AEFGSCHRYEPSGSLHGLMRVRGFVQDDAHIFCTSDQITAEVSDFCELLKSVYADFGFEE 417

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             +K S RPE+RVGSD +WD AE  +K        +    ++     G+GAFYGPK +++
Sbjct: 418 PRIKFSDRPEQRVGSDEVWDQAEASLKAA------AEASGLDYEYNPGDGAFYGPKLDFV 471

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDAIGR+WQ GTIQ DFNLP R +A ++   SEK  PVM+HRA+ GS+ERF+G++IE++
Sbjct: 472 VKDAIGREWQTGTIQCDFNLPERLDASFIGDDSEKHRPVMLHRAILGSLERFLGVLIESY 531

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G LP WL+P Q ++ TITS A  YA+E+   +    L  ETD RNE INYK+REHS+ K
Sbjct: 532 AGKLPFWLAPRQVVIATITSDADGYAEEVKAAMVKAGLHAETDLRNEKINYKVREHSVGK 591

Query: 603 IPIIIICGDKEASERSIGIRRF--GSTTTQKVSLLDAIPILTKESLPPDCQK 652
           +P+I + G KEA + ++ +R    G  T + +SL DAI  L++++  PD ++
Sbjct: 592 VPVIAVVGRKEAEDGTLALRFLGEGGKTQEILSLADAIARLSEDAKAPDLKR 643


>gi|23016433|ref|ZP_00056189.1| COG0441: Threonyl-tRNA synthetase [Magnetospirillum magnetotacticum
           MS-1]
          Length = 621

 Score =  700 bits (1807), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 321/630 (50%), Positives = 442/630 (70%), Gaps = 14/630 (2%)

Query: 22  TGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPED-PRSLAVIRHSCAH 79
           TG DVA+ I   LAK A+A+ I+G++ DL+  + R+ ++ IIT +    +L ++RH  AH
Sbjct: 2   TGLDVAKDIGPGLAKAALAITIDGEMKDLATLITRDVNLSIITAKSGADALELLRHDAAH 61

Query: 80  IMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQ 139
           +MAEAV+ ++PE QV IGP IE+GFYYDF +  PF+ D+L +IEK+M EI+ RD    ++
Sbjct: 62  VMAEAVKELYPETQVTIGPSIENGFYYDFARPTPFTPDDLEKIEKRMAEIVDRDEAITRE 121

Query: 140 YLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFK 199
               + A + F    E YK EI+ SIPA + + LYRQG + DLCRGPH+ ST ++ K FK
Sbjct: 122 EWDRDTAVQFFLDAGETYKAEIIASIPADQKIGLYRQGNFIDLCRGPHLPSTAKLGKAFK 181

Query: 200 LMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIA 259
           LMK+AGAYWRGDS   ML RIYGTAW  ++EL  YL+ LEE+EKRDHR+L REM+LFH  
Sbjct: 182 LMKLAGAYWRGDSRNEMLQRIYGTAWFDKKELDAYLHMLEEAEKRDHRRLGREMELFHQQ 241

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANM 318
           E+ +G +FWH+KGW +++ + SYMRR+++ +DY+E+ TPQ++D  LW+ SGH D +  +M
Sbjct: 242 EEAAGSVFWHKKGWTLYRAVESYMRRRLEANDYQEVKTPQLVDFSLWEASGHADKFSESM 301

Query: 319 FAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLH 378
           F ++  D+     R  A+KPMNCP HV +F  G+KSYR+LP+R+AEFGS +R EPSG+LH
Sbjct: 302 FTIRTQDE-----RHLAVKPMNCPCHVQIFRQGIKSYRDLPLRMAEFGSCHRYEPSGALH 356

Query: 379 GLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD 438
           G+MRVR FTQDDAH+FCT++Q+ +E +    L+  +Y DFGF  + VK S RP KR GSD
Sbjct: 357 GIMRVRAFTQDDAHIFCTEDQITSETIAFCQLLKEVYTDFGFTDVRVKFSDRPAKRAGSD 416

Query: 439 ALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
             WD AE+ +      ++ S    + T +  GEGAFYGPK E++L+DAIGRDWQCGT+QV
Sbjct: 417 ETWDKAESAL------LEASKAAGLETVLNPGEGAFYGPKLEFVLRDAIGRDWQCGTLQV 470

Query: 499 DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVT 558
           DF LP R +A YV     K  PVM+HRA+ GS ERF+GI+IENF G  P+WL+P+Q +V 
Sbjct: 471 DFVLPERLDAAYVAEDGAKKRPVMLHRAILGSFERFLGILIENFAGRFPVWLAPVQVVVA 530

Query: 559 TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERS 618
           TI S A  +A E+A  LK+  + +E D RNE INYK+REHS+ K+P++++ G +EA  R 
Sbjct: 531 TIVSEADVFATEVAATLKAAGIRVELDLRNEKINYKVREHSVAKVPVMLVVGKREAESRQ 590

Query: 619 IGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
           + IRR GS   + V+L  A+  L  E+ PP
Sbjct: 591 VAIRRLGSQNQEIVALDQAVATLAAEATPP 620


>gi|260433159|ref|ZP_05787130.1| threonyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157]
 gi|260416987|gb|EEX10246.1| threonyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157]
          Length = 652

 Score =  699 bits (1803), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/650 (51%), Positives = 444/650 (68%), Gaps = 12/650 (1%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           + LTFPDG+ +++    T ++VA  IS SLAKKA++  +NG+  DL  P+ ++  I I T
Sbjct: 8   VSLTFPDGNSRSYAAGVTPAEVAADISTSLAKKAISATVNGQHWDLQWPIEQDAEIAIHT 67

Query: 64  PED-PRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
            +D  ++  +IRH  AH+MA AVQ IWP+ +V IGP+IE+G+YYDFD+ +PF+ ++L  I
Sbjct: 68  MKDEAQANELIRHDFAHVMARAVQEIWPDTKVTIGPVIENGWYYDFDRAEPFTPEDLGLI 127

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EKKM+EII +  P   +    E+A   +++  E YKVE++E+IP  E V +Y  G W DL
Sbjct: 128 EKKMKEIINKRDPVTTEIWDRERAIAFYKANNEPYKVELIEAIPGDEPVRMYWHGHWQDL 187

Query: 183 CRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           CRGPH++ TGQ+    FKLM +AGAYWRGDSNRPML RIYG A+  +++L  YL+ LEE+
Sbjct: 188 CRGPHLQHTGQLPGDAFKLMSIAGAYWRGDSNRPMLQRIYGVAFTGKEKLKAYLHMLEEA 247

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVL 300
            KRDHRKL REMDLFH+ E+  G IFWH  GW I+  L  YMRR+ +   Y E+NTPQV+
Sbjct: 248 AKRDHRKLGREMDLFHMQEEAPGQIFWHPNGWTIYTQLQDYMRRQQRRGGYVEVNTPQVV 307

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D+ LW++SGHWD Y+ NMF V+  ++  ++    ALKPMNCP HV +F  GLKSYR+LP+
Sbjct: 308 DRKLWERSGHWDKYQENMFIVEVDEEHAREKAVNALKPMNCPCHVEIFKQGLKSYRDLPL 367

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AEFGS  R EPSG+LHG+MRVRGF QDDAH+F T++Q+ +EC +    +  +YKD GF
Sbjct: 368 RMAEFGSCARYEPSGALHGIMRVRGFAQDDAHIFSTEDQIGDECARFIGFLTDVYKDLGF 427

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           +   VK S RPE+R GSD +WD AE  +  +  T     +  +N     GEGAFYGPK E
Sbjct: 428 DSFKVKFSDRPEQRAGSDEVWDKAEEAL--LTATRAAGVEPELNP----GEGAFYGPKLE 481

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           ++L DAIGRDWQCGT QVDF LP R +A Y+ +   K  PVM+HRA  GS ERFIGI+IE
Sbjct: 482 FVLTDAIGRDWQCGTFQVDFVLPERLDATYIGADGAKHRPVMLHRACLGSFERFIGILIE 541

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              G LP WL+P Q +V +ITS A +Y  E+   LK+  +  E D RNE INYK+REHS+
Sbjct: 542 EHAGKLPFWLAPRQVVVASITSEADDYVLEVVETLKAAGVRAEADIRNEKINYKVREHSV 601

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI-LTKESLPPD 649
            K+P+I+  G +E  ER++ +RR G   TQ V  LDA+   L   + PPD
Sbjct: 602 GKVPVILAVGHREVEERTVSVRRLGEKQTQ-VQPLDAVTKELAHAATPPD 650


>gi|254453851|ref|ZP_05067288.1| threonyl-tRNA synthetase [Octadecabacter antarcticus 238]
 gi|198268257|gb|EDY92527.1| threonyl-tRNA synthetase [Octadecabacter antarcticus 238]
          Length = 649

 Score =  698 bits (1801), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 331/653 (50%), Positives = 444/653 (67%), Gaps = 10/653 (1%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           M   I LTFPDG+ + +    T + VA SI+ SLAKKA++  +NG+  D++ P+  + S+
Sbjct: 1   MAQQISLTFPDGNARQYDAGVTPAVVAASIASSLAKKAISATVNGEHWDMAWPINADASV 60

Query: 60  EIITPEDPR-SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
            I T +D   +L +IRH  AHIMA AVQ +WP+ QV IGP+I+DG+YYDFD+++PF+ D+
Sbjct: 61  AINTMKDEAPALELIRHDLAHIMARAVQELWPDTQVTIGPVIKDGWYYDFDRKKPFTPDD 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           LA IEKKM+EII +      +    E A + +E + E YKVE++  IP  E + +Y  G+
Sbjct: 121 LATIEKKMKEIINKRDAVRTEVWDREVAIKYYEDRGEPYKVELINGIPGDEPLRMYWHGD 180

Query: 179 WFDLCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           W DLCRGPH+++TGQV    +KLM +AGAYWRGDS+R ML RIYG A+  +++L  ++  
Sbjct: 181 WQDLCRGPHLQNTGQVPGDSWKLMSIAGAYWRGDSDRAMLQRIYGVAFQNKEQLRAHMNM 240

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINT 296
           LEE+ KRDHRKL REMDLFH+ E+  G IFWH  GW I+  L  YMRRK +   Y E+NT
Sbjct: 241 LEEAAKRDHRKLGREMDLFHMQEEAPGQIFWHPNGWLIYTQLQDYMRRKQRAGGYVEVNT 300

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           PQV+D+ LW+QSGHW+ Y+ +MF V+  +D  ++    ALKPMNCP HV ++N GLKSYR
Sbjct: 301 PQVVDRKLWEQSGHWEKYQEHMFVVEVDEDHAREKSVNALKPMNCPCHVLIYNQGLKSYR 360

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +LP+R+AEFGS  R EPSG+LHG+MRVRGFTQDDAH+FCT++Q+  E L     +  +YK
Sbjct: 361 DLPMRMAEFGSCNRYEPSGALHGIMRVRGFTQDDAHIFCTEDQIEEETLTYIEFLTGVYK 420

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           D GFE   VK S RP+ R GSD +WD AE  +  +  T K   +  +N     GEGAFYG
Sbjct: 421 DLGFENFKVKFSDRPDTRAGSDEVWDKAETAL--LAATRKAGIEPELNP----GEGAFYG 474

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK E++L DAIGRDWQCGT QVDF LP R +A Y+ +  EK  PVM+HRA  GS ERFIG
Sbjct: 475 PKLEFVLTDAIGRDWQCGTHQVDFVLPDRLDANYIGADGEKHRPVMLHRATLGSFERFIG 534

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           I+IE   G LP WL+P Q +V +I S A +Y +E+   L++  +  E D RNE INYK+R
Sbjct: 535 ILIEEHAGKLPFWLAPRQVVVASIISDADDYVREVVAALQAKGVRAEADIRNEKINYKVR 594

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPD 649
           EHS+ K+P+I+ CG +E  ER++ +RR G   T   +L   +  L   + PPD
Sbjct: 595 EHSLGKVPVILACGAREVEERTVSVRRLGDKQTSVTTLAVIVEDLQISATPPD 647


>gi|89071308|ref|ZP_01158467.1| threonyl-tRNA synthetase [Oceanicola granulosus HTCC2516]
 gi|89043173|gb|EAR49409.1| threonyl-tRNA synthetase [Oceanicola granulosus HTCC2516]
          Length = 654

 Score =  698 bits (1801), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/654 (50%), Positives = 441/654 (67%), Gaps = 10/654 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           S I LTFPDG+ + +P   T ++VA  IS SL KKA++  ++G   DL  P+  + +I I
Sbjct: 6   SPITLTFPDGNARQYPAGVTAAEVAADISTSLGKKAISAQVDGAHWDLQWPIEADAAIAI 65

Query: 62  ITPEDPR-SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            T +D   +L ++RH  AHIMA AVQ IWP+V+V IGP+IE G+YYDFD+ +PF+ ++L 
Sbjct: 66  NTMKDEAPALELVRHDLAHIMARAVQEIWPDVKVTIGPVIEHGWYYDFDRAEPFTPEDLG 125

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEKKM+EII +  P   +    ++A   +    E YKVE++ESIP  E + +Y  G+W 
Sbjct: 126 AIEKKMREIINKRDPVRTETWERDRAIAHYRDNDEPYKVELIESIPGSEPIRMYWHGDWQ 185

Query: 181 DLCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           DLCRGPH++ TGQV    FKLM VAGAYWRGDS+R ML RIYG A+ T+  L  +L+ LE
Sbjct: 186 DLCRGPHLQHTGQVPGDAFKLMSVAGAYWRGDSSRAMLQRIYGAAFLTRDALKAHLHRLE 245

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E++KRDHRKL REMDLFH+  +  G +FWH  GW ++ TL  YMRRK +   Y EINTPQ
Sbjct: 246 EAQKRDHRKLGREMDLFHMQAEAPGQVFWHPNGWTVYTTLQDYMRRKQRAGGYREINTPQ 305

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW+ SGHWD Y+ +MF V+  ++  ++    ALKPMNCP HV VFN GLKSYR+L
Sbjct: 306 VVDRKLWEASGHWDKYQDHMFIVEVDEEHAQEKAINALKPMNCPCHVQVFNQGLKSYRDL 365

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFGS  R EPSG+LHG+MRVRGFTQDDAH+FCT++Q+  EC +  N +  IY+D 
Sbjct: 366 PLRLAEFGSCSRYEPSGALHGIMRVRGFTQDDAHIFCTEDQIEAECARFINFLAGIYEDL 425

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF    +K +TRPEKRVGSDA WD  EN ++  +      +  R  T +  G+GAFYGPK
Sbjct: 426 GFPTFEIKFATRPEKRVGSDASWDHVENALESAI-----RATGRTYT-LEPGDGAFYGPK 479

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++ L DAIGR WQCGT QVD NLP R  A Y+     K  P M+HRA  GS ERFIGI+
Sbjct: 480 LDFYLTDAIGRTWQCGTFQVDPNLPERLGATYIGEDGAKHRPYMLHRATLGSFERFIGIL 539

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE   G LP WL+P Q +V +I S A  Y  E+ + L++  +  E D RNE IN+K+REH
Sbjct: 540 IEEHAGKLPFWLAPRQVVVASIVSDADGYVHEVVDALQAAGVRAEADTRNEKINFKVREH 599

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           S+ K+P+I+ CG +E  ER++ +RR G   T+   L   +  L+ E+ PPD ++
Sbjct: 600 SVGKVPVILACGGREVEERTVSVRRLGDKATRTAGLDALVGELSAEATPPDLRR 653


>gi|126735278|ref|ZP_01751024.1| threonyl-tRNA synthetase [Roseobacter sp. CCS2]
 gi|126715833|gb|EBA12698.1| threonyl-tRNA synthetase [Roseobacter sp. CCS2]
          Length = 648

 Score =  697 bits (1799), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 331/653 (50%), Positives = 442/653 (67%), Gaps = 14/653 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS---I 59
           + I LTFPDG+ +++    T +DVA  IS SL KKA++  ++G+  DL  P+   S   I
Sbjct: 2   AQISLTFPDGNSRSYEAGVTAADVAADISSSLRKKAISATVDGQHWDLQWPIEADSAIGI 61

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
             +  ++P +L ++RH  AHIMA AVQ IWP+ QV IGP+I+DG+YYDFD+++PF+ ++L
Sbjct: 62  NTMKDQEP-ALELVRHDLAHIMARAVQEIWPDTQVTIGPVIKDGWYYDFDRKEPFTPEDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           + IEKKM+EII +      +      A + ++ + E YKVE++ESIP +E + +Y  G+W
Sbjct: 121 STIEKKMKEIINKRDEVRTEIWERNVAIQYYKDRGEPYKVELIESIPGEEPLRMYWHGDW 180

Query: 180 FDLCRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
            DLCRGPH++ TGQV    FKLM +AGAYWRGDS+R ML RIYGTA+  ++ L  +L+ L
Sbjct: 181 QDLCRGPHLQHTGQVPADGFKLMSIAGAYWRGDSDRAMLQRIYGTAFTNKEGLKAHLHML 240

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
           EE+ KRDHRKL REM+LFH+ E+  G +FWH  GW ++  L  Y+RRK +  DY EINTP
Sbjct: 241 EEAAKRDHRKLGREMNLFHMQEEAPGQVFWHPNGWTVYTELQDYVRRKQRAGDYREINTP 300

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           QV+D+ LW+ SGHWD Y  +MF V+  ++  K+    ALKPMNCP HV VFN GLKSYR+
Sbjct: 301 QVVDRKLWEASGHWDKYHEHMFVVEVEEEHAKEKAINALKPMNCPCHVQVFNQGLKSYRD 360

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+RLAEFGS  R EPSG+LHG+MRVRGFTQDD H+FCT+EQ+  EC +  N +  IYKD
Sbjct: 361 LPLRLAEFGSCARYEPSGALHGIMRVRGFTQDDGHIFCTEEQIETECARFINFLADIYKD 420

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD-RINTGVLLGEGAFYG 476
            GFE   +  +TRPEKRVGSD  WD  E  ++     IK++ +D R+      G+GAFYG
Sbjct: 421 LGFEDFEIAFATRPEKRVGSDESWDHVEGALEAA---IKSTGRDFRLEP----GDGAFYG 473

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK ++ L DA+GR WQCGT QVD NLP R  A Y+     K  P M+HRA  GS ERFIG
Sbjct: 474 PKLDFYLTDALGRTWQCGTFQVDPNLPERLGATYIGQDGSKHRPFMLHRATLGSFERFIG 533

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           I+IE   G LP WL+P Q +V TI S A +YA E+ N LK+  +  E D RNE IN+K+R
Sbjct: 534 ILIEEHAGKLPFWLAPRQVVVATIVSDADDYAMEVVNALKAVGVRAEADLRNEKINFKVR 593

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPD 649
           EHS+ K+P+I+  G +E  E+++  RR G   T   SL + +  L + S PPD
Sbjct: 594 EHSVGKVPVILALGAREVEEKTVTARRLGENKTSVTSLTEIVAELGRASTPPD 646


>gi|260425980|ref|ZP_05779959.1| threonyl-tRNA synthetase [Citreicella sp. SE45]
 gi|260420472|gb|EEX13723.1| threonyl-tRNA synthetase [Citreicella sp. SE45]
          Length = 649

 Score =  697 bits (1798), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 331/653 (50%), Positives = 442/653 (67%), Gaps = 10/653 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEI 61
           + I LTFPDG++++F    T ++VA SIS+SL+KKA++  +NG+  DL  P+ E + I I
Sbjct: 2   AQISLTFPDGNVRDFDSGVTPAEVAASISKSLSKKAISAQVNGQHWDLQWPIDESAEIAI 61

Query: 62  IT-PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            T  +D  +L +IRH  AH+MA AVQ IWP  +V IGP+ E+G++YDFD+ +PF+ ++L 
Sbjct: 62  NTLQDDAPALELIRHDLAHVMARAVQEIWPATKVTIGPVTENGWFYDFDRAEPFTPEDLG 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IE KM+EII        +     +AR  +E + E YKVE+++ IP   ++ +Y  GEW 
Sbjct: 122 AIEAKMKEIINARDAVRTEIWDRARARAFYEERGEGYKVELVDRIPEGADIRMYWHGEWQ 181

Query: 181 DLCRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           DLCRGPH++STGQ+    FKLM V+GAYW GD NRPML RI G A+  + +L +YL FLE
Sbjct: 182 DLCRGPHLQSTGQLPADAFKLMGVSGAYWFGDVNRPMLQRIQGVAFRNRDDLKKYLNFLE 241

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+ KRDHRKL REMDLFH+  +  G IFWH  GW ++ +L  YMRR + KD Y E+NTPQ
Sbjct: 242 EAAKRDHRKLGREMDLFHLQPEAPGQIFWHPNGWTVYTSLQDYMRRMQRKDGYVEVNTPQ 301

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+++ LW++SGHW++YR NMF V+  ++  ++    ALKPMNCP HV +FNHGLKSYR+L
Sbjct: 302 VVNRKLWEESGHWENYRENMFIVEVDEEGAREKTINALKPMNCPCHVQIFNHGLKSYRDL 361

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFGS  R EPSG+LHG+MRVRGFTQDDAH+FCT +Q+  E  K  + +  IY D 
Sbjct: 362 PLRMAEFGSCNRYEPSGALHGIMRVRGFTQDDAHIFCTFDQIEEESKKFIDFLAKIYADL 421

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+   VKLSTRPEKRVGS+  WD  E  +           +      +  GEGAFY PK
Sbjct: 422 GFDSWRVKLSTRPEKRVGSEESWDSMEEALANACKAAGREFE------IFPGEGAFYAPK 475

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E++L DAIGRDWQCGT+Q+D NLP R +A YV    EK  P+M+HRAV GS ERFIGI+
Sbjct: 476 LEFVLTDAIGRDWQCGTLQLDPNLPERLDANYVGQDGEKHRPIMLHRAVLGSFERFIGIL 535

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE   G LP WL+P Q +V +ITS A +Y  E    L++  +  E D RNE INYK+REH
Sbjct: 536 IEEHSGKLPFWLAPRQVVVASITSEADDYVHEAVAALRAAGVRAEADVRNEKINYKVREH 595

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           S+ K+P+I+  G +E  ER++ +RR G   TQ  SL +    L  E+ PPD +
Sbjct: 596 SLGKVPVILAVGHREVEERTVTVRRLGEKQTQVRSLDEIAAELGTEATPPDLR 648


>gi|303257521|ref|ZP_07343533.1| threonine--tRNA ligase [Burkholderiales bacterium 1_1_47]
 gi|331000214|ref|ZP_08323898.1| threonine--tRNA ligase [Parasutterella excrementihominis YIT 11859]
 gi|302859491|gb|EFL82570.1| threonine--tRNA ligase [Burkholderiales bacterium 1_1_47]
 gi|329572380|gb|EGG54033.1| threonine--tRNA ligase [Parasutterella excrementihominis YIT 11859]
          Length = 641

 Score =  697 bits (1798), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 323/642 (50%), Positives = 449/642 (69%), Gaps = 15/642 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           I++T PDGS + F    T  DVA SI   LA+ A+A  +NGK+ DLS P+ E S + I+T
Sbjct: 2   IEVTLPDGSKREFDSPVTVGDVAASIGAGLARAALAGKVNGKLVDLSHPITENSTVSIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +DP  L +IRHS +H+MA+AV+ ++PE Q+ IGP+IE+GFYYDF   +  ++++L  IE
Sbjct: 62  DKDPEGLEIIRHSTSHLMAQAVKELYPEAQITIGPVIENGFYYDFSLPKHLTNEDLPLIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           KKM EI+ RD P +++ +  ++A + F S  E YK EI+ SIPA E ++LYRQG++ DLC
Sbjct: 122 KKMDEIVKRDLPIVREEMDRDEAVKYFNSIGEHYKAEIIGSIPAGETISLYRQGDYVDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV STG++K   KLMK+AGAYWRGDS   ML RIYGTAW  + ++  YL+ LEE+EK
Sbjct: 182 RGPHVPSTGRLK-VHKLMKLAGAYWRGDSKNEMLQRIYGTAWAKKDDMAAYLHMLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHR+L +E+DLFH  E+  G+IFWH +GW ++Q +  YMRR  +D DY+E+  PQ+LD+
Sbjct: 241 RDHRRLGKELDLFHFQEEAPGLIFWHARGWALWQQVEQYMRRVYQDNDYQEVKAPQLLDR 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHW  Y+ NMF  +  +      R +ALKPMNCPGH+ +FN  ++SYR+LP+R 
Sbjct: 301 SLWEKSGHWSKYKENMFTTESEN------RYYALKPMNCPGHIQIFNSAVRSYRDLPIRY 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG+ +RNEPSGSLHGLMRVRGFTQDD H+FCT++Q+ +EC     L+  +Y D+GF  
Sbjct: 355 GEFGACHRNEPSGSLHGLMRVRGFTQDDGHIFCTEDQILSECTAYTKLVQKVYADYGFTD 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I  K++TRPEKR+G DA WD AE   K ++D +  S    I   +L GEGAFYGPK EY 
Sbjct: 415 ISYKIATRPEKRIGDDATWDKAE---KALMDALDASG---IKYDILPGEGAFYGPKIEYH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+D++GR WQCGTIQVDF +P+R  A YV   + +  PVM+HRA+ GS+ERFIG+++E++
Sbjct: 469 LRDSLGRGWQCGTIQVDFQMPARLGAEYVTESNGRATPVMLHRAIVGSLERFIGMLLEHY 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G LP WL+P+Q  V  IT    +YA+E+ ++LK   L  E D RN  I YKIRE S++K
Sbjct: 529 AGQLPPWLAPVQVAVANITDDQADYAKEVVSMLKKAGLRAEADLRNGKITYKIRELSLQK 588

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P I++ G KE +E  + +R  G      +S+ D I ++ ++
Sbjct: 589 LPYILVVGAKEKAEGKVAVRVRGGKDLGAMSVEDFIKLVQED 630


>gi|56696171|ref|YP_166527.1| threonyl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
 gi|73919826|sp|Q5LTX8|SYT_SILPO RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|56677908|gb|AAV94574.1| threonyl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
          Length = 648

 Score =  696 bits (1797), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 331/651 (50%), Positives = 440/651 (67%), Gaps = 10/651 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
           + I LTFPDG+ +++    T + VA  IS SLAKKA++  ++GK  DL  P+  +  I I
Sbjct: 2   AQISLTFPDGNARSYDAGVTPAQVAADISTSLAKKAISATVDGKHWDLQWPIATDAQIAI 61

Query: 62  ITPED-PRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            T  D  ++  ++RH  AHIMA AVQ IWP  +V IGP+IE+G+YYDFD+ +PF+ ++L 
Sbjct: 62  HTMADEAQANELVRHDLAHIMARAVQEIWPATKVTIGPVIENGWYYDFDRAEPFTPEDLG 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEKKM+EII +  P   +     +A E +++  E YKVE++E+IP  E + +Y  G W 
Sbjct: 122 LIEKKMKEIINKREPVTTEVWERTRAIEFYKANNEPYKVELIEAIPGTEPIRMYWHGHWQ 181

Query: 181 DLCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           DLCRGPH++ TGQV    FKLM +AGAYWRGDSNRPML RIYG A+  +++L  +L+ LE
Sbjct: 182 DLCRGPHLQHTGQVPGDAFKLMSIAGAYWRGDSNRPMLQRIYGVAFTGKEKLKAHLHMLE 241

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+ KRDHRKL REMDLFH+ E+  G IFWH  GW I+ TL  YMRR+ +   Y E+NTPQ
Sbjct: 242 EAAKRDHRKLGREMDLFHMQEEAPGQIFWHPNGWTIYTTLQDYMRRQQRRGGYVEVNTPQ 301

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW+ SGHW+ Y+ NMF V+  ++  ++    ALKPMNCP HV +FN GLKSYR+L
Sbjct: 302 VVDRKLWEASGHWEKYQENMFIVEVDEEHAREKAVNALKPMNCPCHVQIFNQGLKSYRDL 361

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFGS  R EPSG+LHG+MRVRGFTQDD H+FC ++Q+ +E  +  + +  IYKD 
Sbjct: 362 PLRMAEFGSCNRYEPSGALHGIMRVRGFTQDDGHIFCAEDQIESETAEFIDFLSMIYKDL 421

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFEK  VK S RP+ R GSDA+WD AE  +      +  +    I   +  GEGAFYGPK
Sbjct: 422 GFEKFSVKFSDRPDTRAGSDAVWDKAEAAL------LSATRAAGIEPELNPGEGAFYGPK 475

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E++L DAIGRDWQCGT QVDF LP R +A Y+ +   K  PVM+HRA  GS ERFIGI+
Sbjct: 476 LEFVLTDAIGRDWQCGTHQVDFVLPERLDATYIGADGAKHRPVMLHRATLGSFERFIGIL 535

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE   G LP WL+P Q +V +ITS A +Y +E+   L +  +  E D RNE INYK+REH
Sbjct: 536 IEEHAGKLPFWLAPRQVVVASITSEADDYVREVVAELCAAGVRAEADTRNEKINYKVREH 595

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPD 649
           S+ K+P+I+  G +E  ER++ +RR G   T   SL D    L + + PPD
Sbjct: 596 SVGKVPVILAVGHREVEERTVSVRRLGEKQTSVQSLADVTIELGRAATPPD 646


>gi|145589014|ref|YP_001155611.1| threonyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|189083617|sp|A4SX33|SYT_POLSQ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|145047420|gb|ABP34047.1| Ser-tRNA(Thr) hydrolase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
          Length = 640

 Score =  696 bits (1796), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 317/623 (50%), Positives = 444/623 (71%), Gaps = 15/623 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS + +      +DVA+SI   LAK A+   ++G++ D S  + ++  + IIT +
Sbjct: 4   VTLPDGSKREYEAPVRVADVAQSIGSGLAKAALGGIVDGQMVDTSFVIDKDSHLAIITDK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
            P +L ++RHS AH++A AV+ ++PE QV IGP+IE+GFYYDF   +PF+ D+L  +EKK
Sbjct: 64  SPEALEIVRHSTAHLLAYAVKELFPEAQVTIGPVIENGFYYDFSYHRPFTPDDLVALEKK 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M E+  +D P ++  +  ++A E F+ + E YK E++ SIP  E+V+LY +G++ DLCRG
Sbjct: 124 MTELAKKDEPVVRTVMPRDEAVEFFKQQGENYKAELIASIPQGEDVSLYAEGKFTDLCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV STG++K  FKLMK+AGAYWRGDS   ML RIYGTAW  +++   YL+ LEESEKRD
Sbjct: 184 PHVPSTGKLK-VFKLMKLAGAYWRGDSKNEMLQRIYGTAWLRKEDQDAYLHMLEESEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHL 304
           HR+L +++DLFH  E+  G+IFWH KGW I+Q +  YMRR  +++ Y+E+  PQ+LD+ L
Sbjct: 243 HRRLGKQLDLFHFQEEAPGLIFWHPKGWSIWQEVEQYMRRVYQNEGYQEVKAPQILDRGL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHWD+Y+ NMF  +  +      R +ALKPMNCPGHV ++N GL SYRELP+R  E
Sbjct: 303 WEKSGHWDNYKENMFTTESEN------RAYALKPMNCPGHVQIYNSGLHSYRELPLRFGE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FG  +RNEPSG+LHGLMRVRGFTQDD H+FCT++Q+ +E       + ++Y+DFGF ++ 
Sbjct: 357 FGQCHRNEPSGALHGLMRVRGFTQDDGHIFCTEDQIQSEVAAFDKAVRAVYQDFGFTEVA 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           VKL+ RP KRVG DA+WD AE+ ++G L   K S Q+      L GEGAFYGPK EY LK
Sbjct: 417 VKLALRPAKRVGDDAIWDKAEDALRGAL---KASGQEWEE---LPGEGAFYGPKIEYHLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D+IGR WQCGTIQVDF++P+R  A YV   + +  PVM+HRA+ GS+ERFIGI+IEN  G
Sbjct: 471 DSIGRTWQCGTIQVDFSMPARLGAEYVAEDNSRKTPVMLHRAIVGSLERFIGILIENHAG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
           N+P+WL+P QA+V  I+ ++  YAQ++   LK     +E+D RNE I YKIREH+++KIP
Sbjct: 531 NMPVWLAPTQAVVLNISGNSAAYAQKVQQSLKKQGFRVESDLRNEKITYKIREHALQKIP 590

Query: 605 IIIICGDKEASERSIGIRRFGST 627
            +++ GDKE+   ++ +R  G  
Sbjct: 591 FLLVVGDKESESNTVAVRARGGV 613


>gi|329849735|ref|ZP_08264581.1| threonyl-tRNA synthetase [Asticcacaulis biprosthecum C19]
 gi|328841646|gb|EGF91216.1| threonyl-tRNA synthetase [Asticcacaulis biprosthecum C19]
          Length = 640

 Score =  696 bits (1796), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 323/649 (49%), Positives = 443/649 (68%), Gaps = 14/649 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPE 65
           +TFPDG++++F    TG  +AES+S+SLAKKAV + ++G + DL   +  G  ++I+T E
Sbjct: 1   MTFPDGAVRSFERGTTGRQIAESLSKSLAKKAVLIKLDGALLDLDRQLENGGRLDILTRE 60

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
            P  L VIRH  AHI+AEAVQ ++P  QV IGP I+DGFYYDF +++PFS+D+  +IE K
Sbjct: 61  APEVLEVIRHDTAHILAEAVQELFPGTQVTIGPAIDDGFYYDFARDEPFSTDDFPKIEAK 120

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE-WFDLCR 184
           M+EI+ RD    ++      A   FES  E YK EI+  +P  E++++Y  G+ W DLC 
Sbjct: 121 MREIVDRDEKIRREVWDRNHAIAHFESIGEKYKAEIIRDLPESEDISVYFHGDAWKDLCL 180

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPH+ S+  + K FKL K+AGAYWRGD N   L RIYGTAW+++ +L  Y+  +EE+EKR
Sbjct: 181 GPHLPSSKFIGKAFKLTKLAGAYWRGDHNNAQLQRIYGTAWSSEADLEAYIQRIEEAEKR 240

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQH 303
           DHRK+ R MDLFH+ E+G G++FWH KGW +++ L +YMRR++    Y E+ TPQVLD+ 
Sbjct: 241 DHRKIGRAMDLFHMQEEGRGMVFWHPKGWVLWRVLEAYMRRRLDASGYVEVKTPQVLDRS 300

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
            W+QSGHW+ YRANMF  +  +       T +LKPMNCPGHV +F  GL+SY+ELP+R+A
Sbjct: 301 FWEQSGHWEKYRANMFVCETVEG-----ETLSLKPMNCPGHVQIFKVGLRSYKELPIRMA 355

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFG+ +R EPSGSLHGLMRVRGFTQDDAH+FC ++Q+  E  K   L   I+ D G E  
Sbjct: 356 EFGACHRYEPSGSLHGLMRVRGFTQDDAHIFCREDQIVEETAKFVRLTKLIHADLGMETA 415

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            + L+TRPE R GSDA WD AE ++       + + Q  +   +  G+GAFY PK ++I+
Sbjct: 416 YINLATRPEIRAGSDAFWDKAEGMLA------EAAKQAGVEPVIAEGDGAFYAPKLDFIV 469

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           KDAIGR+W CGT+Q+D+ LP R +A YV     +  PVM+HRA+ GS ERFIGIMIENF 
Sbjct: 470 KDAIGREWTCGTLQLDYVLPERLDAEYVAEDGSRQRPVMLHRAILGSFERFIGIMIENFA 529

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  PLWL+P+Q +V  ITS A  YA+++   L++  L +E D RNE INYK+REHS+ K+
Sbjct: 530 GKFPLWLAPVQVVVAPITSDANPYAEKVTQSLRAAGLRVEADLRNEKINYKVREHSVAKV 589

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           P+I + G KEA    + +R  GS     +SL DA+  L  ++ PPD ++
Sbjct: 590 PVIAVVGRKEAETGEVALRFLGSDGQTILSLADAVQRLQTDATPPDLKQ 638


>gi|161621305|ref|YP_583315.2| threonyl-tRNA synthetase [Cupriavidus metallidurans CH34]
          Length = 635

 Score =  696 bits (1795), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 323/625 (51%), Positives = 442/625 (70%), Gaps = 15/625 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I +T PDGS + +P   T ++VA+SI   LAK A+A  ++G++ D S  + ++ S+ I+T
Sbjct: 2   IVITLPDGSRREYPGPVTVAEVAQSIGSGLAKAALAGKVDGRMVDTSFRIDQDASLSIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   + VIRHS AH++A AV+ ++P+ QV IGP+I++GFYYDF  ++PF+ ++LA IE
Sbjct: 62  DKDADGVDVIRHSTAHLLAYAVKELYPDAQVTIGPVIDNGFYYDFSYKRPFTPEDLAAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           KKM E+  +D    ++  + ++A  LFES  E YK EI+ SIPA + + LYR+G + DLC
Sbjct: 122 KKMTELARKDEKVSREVWNRDEAVALFESMGEKYKAEIIASIPADQEIGLYREGSFVDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV STG++K  FKLMKVAGAYWRGDSN  ML RIYGTAW  +++   YL+ LEE+EK
Sbjct: 182 RGPHVPSTGKLK-VFKLMKVAGAYWRGDSNNEMLQRIYGTAWAKKEDQDAYLHMLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQ 302
           RDHR+L + +DLFH+ E+  G++FWH KGW+++Q +  YMR ++ +  YEE+ TPQV+D+
Sbjct: 241 RDHRRLGKTLDLFHLQEEAPGMVFWHPKGWQVWQAVEQYMRGRLGQAGYEEVRTPQVMDR 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD+Y+ NMF       T  + R +A+KPMNCPGHV +FNHGL+SYR+LP+RL
Sbjct: 301 SLWERSGHWDNYKENMFV------TESEKRDYAIKPMNCPGHVQIFNHGLRSYRDLPLRL 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFG+ +RNEPSG+LHGLMRVRGF QDDAH+FCT+EQ+  E    + L  SIY DFGF+ 
Sbjct: 355 AEFGACHRNEPSGALHGLMRVRGFVQDDAHIFCTEEQIVEEAKAFNELAFSIYDDFGFKD 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + VKLS RPEKR GSDA+WD AE+ ++  L       ++      L GEGAFYGPK EY 
Sbjct: 415 VAVKLSLRPEKRAGSDAVWDHAEDGLRLALRACGVEWEE------LPGEGAFYGPKVEYH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDAIGR WQCGT+Q+D  LP R  A YV+  + +  PVM+HRA+ GS ERF+GI++EN 
Sbjct: 469 IKDAIGRSWQCGTLQLDLVLPERLGAEYVSEDNSRKRPVMLHRAILGSFERFLGILLENH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G LP WL+P Q +V  I  S  EYA+ +  LL+      + D RNE I YKIREHS++K
Sbjct: 529 AGALPAWLAPEQVVVMNIAESQSEYAENVVQLLQKQGFRAKADLRNEKITYKIREHSLQK 588

Query: 603 IPIIIICGDKEASERSIGIRRFGST 627
           IP +++ GDKE     + +R  G+ 
Sbjct: 589 IPYLLVIGDKERDANQVAVRARGNV 613


>gi|259418221|ref|ZP_05742139.1| threonyl-tRNA synthetase [Silicibacter sp. TrichCH4B]
 gi|259345616|gb|EEW57460.1| threonyl-tRNA synthetase [Silicibacter sp. TrichCH4B]
          Length = 648

 Score =  695 bits (1794), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 327/651 (50%), Positives = 448/651 (68%), Gaps = 10/651 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
           + I LTFPDG+ +++    T ++VA  IS SLAKKA++ +++G+  DL  PV ++ +I I
Sbjct: 2   AQISLTFPDGNARSYDAGITPAEVAADISTSLAKKAISASVDGQHWDLQWPVTKDAAIAI 61

Query: 62  ITPED-PRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            T +D  ++  +IRH  AHIMA AVQ IWP+ +V IGP+IE+G+YYDFD+ +PF+ ++L 
Sbjct: 62  HTMKDEAQANELIRHDLAHIMARAVQEIWPDTKVTIGPVIENGWYYDFDRAEPFTPEDLG 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEKKM+EII +  P   +     KA + +    E YKVE++++IP  E + +Y  G+W 
Sbjct: 122 TIEKKMKEIINKREPVTTEVWDRAKAVQYYTDNNEPYKVELIDAIPGDEPLRMYWHGDWQ 181

Query: 181 DLCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           DLCRGPH++ TGQV    FKLM +AGAYWRGDS+R ML RIYG A+  +++L  +L  LE
Sbjct: 182 DLCRGPHLQHTGQVPGDAFKLMSIAGAYWRGDSDRAMLQRIYGVAFTGKEKLKAHLTMLE 241

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+ KRDHRKL REM LFH+ E+  G++FWH  GW+I+ TL  YMRR + K  Y E+NTPQ
Sbjct: 242 EAAKRDHRKLGREMHLFHMQEEAPGMVFWHPNGWRIYTTLQDYMRRMQDKGGYVEVNTPQ 301

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+++ LW+ SGHWD+Y+ NMF V+  +D  ++    ALKPMNCP H+ VFN GLKSYR+L
Sbjct: 302 VVNRKLWEASGHWDNYQENMFIVEVDEDHAREKAVNALKPMNCPCHIQVFNQGLKSYRDL 361

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFGS  R EPSG++HG+MRVRGFTQDD H+FCT+EQ+  E  +  + +  +Y+D 
Sbjct: 362 PLRMAEFGSCNRYEPSGAMHGIMRVRGFTQDDGHIFCTEEQVEAETKEFVSFLAKVYQDL 421

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFEK  VKLSTRPEKRVG++  WD AE  +   +       +      +  GEGAFYGPK
Sbjct: 422 GFEKWRVKLSTRPEKRVGTEESWDQAEAALAAGIQAAGYEYE------LQEGEGAFYGPK 475

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E++L DAIGRDWQCGT+Q+D NLP R +A Y+    +K  P+M+HRA  GS ERFIGI+
Sbjct: 476 LEFVLTDAIGRDWQCGTLQIDPNLPERLDATYIGQDGDKHRPLMLHRATLGSFERFIGIL 535

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE   G LP WL+P Q +V +ITS A +Y  E+   L++  +  E D RNE INYK+REH
Sbjct: 536 IEEHAGKLPFWLAPRQVVVASITSEADDYVNEVVATLRAAGVRAEADIRNEKINYKVREH 595

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPD 649
           S+ K+P+I+  G +E  ER++ +RR G   T+  SL +    L K + PPD
Sbjct: 596 SVGKVPVILAVGHREVEERTVSVRRLGEKQTKVESLTNVTEELAKAATPPD 646


>gi|34580760|ref|ZP_00142240.1| threonyl-tRNA synthetase [Rickettsia sibirica 246]
 gi|28262145|gb|EAA25649.1| threonyl-tRNA synthetase [Rickettsia sibirica 246]
          Length = 635

 Score =  695 bits (1794), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/643 (51%), Positives = 444/643 (69%), Gaps = 15/643 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I ++FPDGSIK F  + T  +VA +IS SLAK A+   ING++ DLS  +  +  + I+T
Sbjct: 2   INISFPDGSIKQFAKNITAYEVANAISMSLAKAAMVAEINGELQDLSIVIDNDCKLRILT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +DP  L +IRH  AH+ AEAV+ ++PE QV IGP IE+G+YYDF +++PF++D+LA IE
Sbjct: 62  AKDPECLEIIRHDAAHLTAEAVKELFPETQVTIGPAIENGYYYDFARDKPFTTDDLAVIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            KMQE+  ++    ++    +KA E F+S  E YK EI+ SIPA E +TLYRQG + DLC
Sbjct: 122 AKMQELSQKNEQVTRELWDRDKAVEFFKSIGEHYKAEIIASIPAGEPITLYRQGNFIDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH  STG VK F KLMKVAGAYWRGDS   ML RIYGTAW T+++L  YL  LEE+EK
Sbjct: 182 RGPHAPSTGVVKHF-KLMKVAGAYWRGDSRNEMLQRIYGTAWATKEQLDSYLLMLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQ 302
           RDHRKL RE+DLFH  E+  G++FWH KGW I+ T+  Y+R+KI K+ Y E+ TP ++D+
Sbjct: 241 RDHRKLGRELDLFHFQEEAQGMVFWHDKGWSIYNTIEQYIRKKIRKNGYTEVKTPVLVDK 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW+ +R +MFA++  D      +T ALKPMNCP HV +F  G+KSYR+LP+R+
Sbjct: 301 SLWEASGHWEKFRDDMFALETDD------KTLALKPMNCPCHVQIFKQGIKSYRDLPLRM 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           +EFG  +RNE SG+LHGLMRVR   QDDAH+FC  EQ+ +E +    L+  +YKDFGF  
Sbjct: 355 SEFGLCHRNEASGALHGLMRVRSLVQDDAHIFCAAEQITDETVSFCKLLTEVYKDFGFTD 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I VK S RPE R GS+ +WD AEN +K  ++      Q   N  +  GEGAFYGPK E++
Sbjct: 415 IKVKFSDRPEIRAGSNEVWDKAENALKEAVE------QAGFNYTLNPGEGAFYGPKLEFV 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L DAIGR WQCGT+Q+DF LP R +A YV +  EK  PVM+HRA+ GS+ERFIGI+IE +
Sbjct: 469 LTDAIGRQWQCGTLQMDFVLPERLDASYVAASGEKKRPVMLHRAILGSLERFIGILIEEY 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  PLWL+P+Q  + TITS   +YA E+   L  + +  + +   + INYKIRE S +K
Sbjct: 529 AGRFPLWLAPVQVAIATITSDLNDYALEVQKALIDNGVRTDVNISPDKINYKIREFSNQK 588

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           IP+I + G +E   + + IRR G+T  + +S+   I ++ +E+
Sbjct: 589 IPMIAVIGKQEQENKQVAIRRLGTTDQEVLSVEQLIAVVKEEN 631


>gi|93353957|gb|ABF08046.1| threonyl-tRNA synthetase [Cupriavidus metallidurans CH34]
          Length = 663

 Score =  695 bits (1793), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 323/625 (51%), Positives = 442/625 (70%), Gaps = 15/625 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I +T PDGS + +P   T ++VA+SI   LAK A+A  ++G++ D S  + ++ S+ I+T
Sbjct: 30  IVITLPDGSRREYPGPVTVAEVAQSIGSGLAKAALAGKVDGRMVDTSFRIDQDASLSIVT 89

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   + VIRHS AH++A AV+ ++P+ QV IGP+I++GFYYDF  ++PF+ ++LA IE
Sbjct: 90  DKDADGVDVIRHSTAHLLAYAVKELYPDAQVTIGPVIDNGFYYDFSYKRPFTPEDLAAIE 149

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           KKM E+  +D    ++  + ++A  LFES  E YK EI+ SIPA + + LYR+G + DLC
Sbjct: 150 KKMTELARKDEKVSREVWNRDEAVALFESMGEKYKAEIIASIPADQEIGLYREGSFVDLC 209

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV STG++K  FKLMKVAGAYWRGDSN  ML RIYGTAW  +++   YL+ LEE+EK
Sbjct: 210 RGPHVPSTGKLK-VFKLMKVAGAYWRGDSNNEMLQRIYGTAWAKKEDQDAYLHMLEEAEK 268

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQ 302
           RDHR+L + +DLFH+ E+  G++FWH KGW+++Q +  YMR ++ +  YEE+ TPQV+D+
Sbjct: 269 RDHRRLGKTLDLFHLQEEAPGMVFWHPKGWQVWQAVEQYMRGRLGQAGYEEVRTPQVMDR 328

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD+Y+ NMF       T  + R +A+KPMNCPGHV +FNHGL+SYR+LP+RL
Sbjct: 329 SLWERSGHWDNYKENMFV------TESEKRDYAIKPMNCPGHVQIFNHGLRSYRDLPLRL 382

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFG+ +RNEPSG+LHGLMRVRGF QDDAH+FCT+EQ+  E    + L  SIY DFGF+ 
Sbjct: 383 AEFGACHRNEPSGALHGLMRVRGFVQDDAHIFCTEEQIVEEAKAFNELAFSIYDDFGFKD 442

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + VKLS RPEKR GSDA+WD AE+ ++  L       ++      L GEGAFYGPK EY 
Sbjct: 443 VAVKLSLRPEKRAGSDAVWDHAEDGLRLALRACGVEWEE------LPGEGAFYGPKVEYH 496

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDAIGR WQCGT+Q+D  LP R  A YV+  + +  PVM+HRA+ GS ERF+GI++EN 
Sbjct: 497 IKDAIGRSWQCGTLQLDLVLPERLGAEYVSEDNSRKRPVMLHRAILGSFERFLGILLENH 556

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G LP WL+P Q +V  I  S  EYA+ +  LL+      + D RNE I YKIREHS++K
Sbjct: 557 AGALPAWLAPEQVVVMNIAESQSEYAENVVQLLQKQGFRAKADLRNEKITYKIREHSLQK 616

Query: 603 IPIIIICGDKEASERSIGIRRFGST 627
           IP +++ GDKE     + +R  G+ 
Sbjct: 617 IPYLLVIGDKERDANQVAVRARGNV 641


>gi|15892219|ref|NP_359933.1| threonyl-tRNA synthetase [Rickettsia conorii str. Malish 7]
 gi|22654126|sp|Q92IX4|SYT_RICCN RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|15619354|gb|AAL02834.1| threonyl-tRNA synthetase [Rickettsia conorii str. Malish 7]
          Length = 635

 Score =  695 bits (1793), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/643 (51%), Positives = 444/643 (69%), Gaps = 15/643 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I ++FPDGSIK F  + T  +VA +IS SLAK A+   ING++ DLS  +  +  + I+T
Sbjct: 2   INISFPDGSIKQFAKNITAYEVANAISMSLAKAAMVAEINGELQDLSIVIDNDCKLRILT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +DP  L +IRH  AH+ AEAV+ ++PE QV IGP IE+G+YYDF +++PF++D+LA IE
Sbjct: 62  AQDPECLEIIRHDAAHLTAEAVKELFPETQVTIGPAIENGYYYDFARDKPFTTDDLAVIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            KMQE+  ++    ++    +KA E F+S  E YK EI+ SIPA E +TLYRQG + DLC
Sbjct: 122 AKMQELSQKNEQVTRELWDRDKAVEFFKSIGEHYKAEIIASIPAGEPITLYRQGNFIDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH  STG VK F KLMKVAGAYWRGDS   ML RIYGTAW T+++L  YL  LEE+EK
Sbjct: 182 RGPHAPSTGVVKHF-KLMKVAGAYWRGDSRNEMLQRIYGTAWATKEQLDSYLLMLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQ 302
           RDHRKL RE+DLFH  E+  G++FWH KGW I+ T+  Y+R+KI K+ Y E+ TP ++D+
Sbjct: 241 RDHRKLGRELDLFHFQEEAQGMVFWHDKGWSIYNTIEQYIRKKIRKNGYTEVKTPVLVDK 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW+ +R +MFA++  D      +T ALKPMNCP HV +F  G+KSYR+LP+R+
Sbjct: 301 SLWEASGHWEKFRDDMFALETDD------KTLALKPMNCPCHVQIFKQGIKSYRDLPLRM 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           +EFG  +RNE SG+LHGLMRVR   QDDAH+FC  EQ+ +E +    L+  +YKDFGF  
Sbjct: 355 SEFGLCHRNEASGALHGLMRVRSLVQDDAHIFCAAEQITDETVSFCKLLTEVYKDFGFTD 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I VK S RPE R GS+ +WD AEN +K  ++      Q   N  +  GEGAFYGPK E++
Sbjct: 415 IKVKFSDRPEIRAGSNEVWDKAENALKEAVE------QAGFNYTLNPGEGAFYGPKLEFV 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L DAIGR WQCGT+Q+DF LP R +A YV +  EK  PVM+HRA+ GS+ERFIGI+IE +
Sbjct: 469 LTDAIGRQWQCGTLQMDFVLPERLDASYVAASGEKKRPVMLHRAILGSLERFIGILIEEY 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  PLWL+P+Q  + TITS   +YA E+   L  + +  + +   + INYKIRE S +K
Sbjct: 529 AGRFPLWLAPVQVAIATITSDLNDYALEVQKALIDNGVRTDFNISPDKINYKIREFSNQK 588

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           IP+I + G +E   + + IRR G+T  + +S+   I ++ +E+
Sbjct: 589 IPMIAVIGKQEQENKQVAIRRLGTTDQEVLSVEQLIAVVKEEN 631


>gi|229586468|ref|YP_002844969.1| threonyl-tRNA synthetase [Rickettsia africae ESF-5]
 gi|259516664|sp|C3PMR6|SYT_RICAE RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|228021518|gb|ACP53226.1| Threonyl-tRNA synthetase [Rickettsia africae ESF-5]
          Length = 635

 Score =  695 bits (1793), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/643 (51%), Positives = 444/643 (69%), Gaps = 15/643 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I ++FPDGSIK F  + T  +VA +IS SLAK A+   ING++ DLS  +  +  + I+T
Sbjct: 2   INISFPDGSIKQFAKNITAYEVANAISMSLAKAAMVAEINGELQDLSIVIDNDCKLRILT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +DP  L +IRH  AH+ AEAV+ ++PE QV IGP IE+G+YYDF +++PF++D+LA IE
Sbjct: 62  AKDPECLEIIRHDAAHLTAEAVKELFPETQVTIGPAIENGYYYDFARDKPFTTDDLAVIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            KMQE+  ++    ++    +KA E F+S  E YK EI+ SIPA E +TLYRQG + DLC
Sbjct: 122 AKMQELSQKNEQVTRELWDRDKAVEFFKSIGEHYKAEIIASIPAGEPITLYRQGNFIDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH  STG VK F KLMKVAGAYWRGDS   ML RIYGTAW T+++L  YL  LEE+EK
Sbjct: 182 RGPHAPSTGVVKHF-KLMKVAGAYWRGDSRNEMLQRIYGTAWATKEQLDSYLLMLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQ 302
           RDHRKL RE+DLFH  E+  G++FWH KGW I+ T+  Y+R+KI K+ Y E+ TP ++D+
Sbjct: 241 RDHRKLGRELDLFHFQEEAQGMVFWHDKGWSIYNTIEQYIRKKIRKNGYTEVKTPVLVDK 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW+ +R +MFA++  D      +T ALKPMNCP HV +F  G+KSYR+LP+R+
Sbjct: 301 SLWEASGHWEKFRDDMFALETDD------KTLALKPMNCPCHVQIFKQGIKSYRDLPLRM 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           +EFG  +RNE SG+LHGLMRVR   QDDAH+FC  EQ+ +E +    L+  +YKDFGF  
Sbjct: 355 SEFGLCHRNEASGALHGLMRVRSLVQDDAHIFCAAEQITDETVSFCKLLTEVYKDFGFTD 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I VK S RPE R GS+ +WD AEN +K  ++      Q   N  +  GEGAFYGPK E++
Sbjct: 415 IKVKFSDRPEIRAGSNEVWDKAENALKEAVE------QAGFNYTLNPGEGAFYGPKLEFV 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L DAIGR WQCGT+Q+DF LP R +A YV +  EK  PVM+HRA+ GS+ERFIGI+IE +
Sbjct: 469 LTDAIGRQWQCGTLQMDFVLPERLDASYVAASGEKKRPVMLHRAILGSLERFIGILIEEY 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  PLWL+P+Q  + TITS   +YA E+   L  + +  + +   + INYKIRE S +K
Sbjct: 529 AGRFPLWLAPVQVAIATITSDLNDYALEVQKALIDNGIRTDFNISPDKINYKIREFSNQK 588

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           IP+I + G +E   + + IRR G+T  + +S+   I ++ +E+
Sbjct: 589 IPMIAVIGKQEQENKQVAIRRLGTTDQEVLSVEQLIAVVKEEN 631


>gi|91787975|ref|YP_548927.1| threonyl-tRNA synthetase [Polaromonas sp. JS666]
 gi|123059945|sp|Q12BR3|SYT_POLSJ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|91697200|gb|ABE44029.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Polaromonas sp.
           JS666]
          Length = 635

 Score =  695 bits (1793), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 324/611 (53%), Positives = 436/611 (71%), Gaps = 15/611 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I++T PD S + +P   T ++VA SI   LAK A+   ++GKV D S  + ++ ++ IIT
Sbjct: 2   IQITLPDASKREYPQAVTVAEVAASIGAGLAKAALGGKVDGKVVDTSYLIEKDSALSIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   L +IRHS AH++A AV+ ++ E QV IGP+IE+GFYYDF  ++PF+ ++LA IE
Sbjct: 62  AKDADGLELIRHSTAHLLAYAVKELFSEAQVTIGPVIENGFYYDFAYKRPFTPEDLAAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M E+ A+D P  ++ L  ++A   F+S  E YK EI+ SIPA E+V+LYR+G + DLC
Sbjct: 122 KRMTELAAKDEPVTRRVLPRDEAVAHFKSIGEHYKAEIIASIPANEDVSLYREGTFEDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV STG++K FFKLMKVAGAYWRGD    ML R+YGTAW T+ EL QYL  LEE+EK
Sbjct: 182 RGPHVPSTGKLK-FFKLMKVAGAYWRGDHRNEMLQRVYGTAWATKDELQQYLTMLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQ 302
           RDHRKL +E+DLFHI +   G++FWH KGW I+Q +  YMR+  +D+ Y+E+  PQV+D+
Sbjct: 241 RDHRKLGKELDLFHIDDHAPGLVFWHPKGWTIWQGVEQYMRKVYQDNGYQEVKGPQVIDK 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+++GHWD YR NMF       T  + R +ALKPMNCPGH+ +F  G+KSYR+LP+R 
Sbjct: 301 TLWEKTGHWDKYRDNMFT------TESEKREYALKPMNCPGHILIFKQGIKSYRDLPLRY 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG  +RNEPSG LHG+MRVRGFTQDD H+FCT+EQ+  EC+    L+  +Y DFGF+ 
Sbjct: 355 GEFGQCHRNEPSGGLHGIMRVRGFTQDDGHIFCTEEQILKECVDYTTLLQKVYTDFGFKN 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+ K++TRP+ R+GSD  WD AE   + ++++++ S        +  GEGAFYGPK EY 
Sbjct: 415 IIYKVATRPDARIGSDESWDKAE---QALIESLRASG---CEFEISPGEGAFYGPKIEYT 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LKDAIGR WQCGT+QVDF++P R +A YV     +  PVM+HRA+ GS+ERFIGI+IE  
Sbjct: 469 LKDAIGRQWQCGTMQVDFSMPERLDAEYVGEDGARHRPVMLHRAIVGSLERFIGILIEEH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G LP WL+PIQ  V  IT S  EYA+E+A  L++  L +  D RNE I YKIREHS++K
Sbjct: 529 AGALPTWLAPIQVSVLNITDSQAEYAREVAKTLQNQGLRVNLDLRNEKITYKIREHSLQK 588

Query: 603 IPIIIICGDKE 613
           +P I++ GDKE
Sbjct: 589 LPYILVVGDKE 599


>gi|315498771|ref|YP_004087575.1| threonyl-tRNA synthetase [Asticcacaulis excentricus CB 48]
 gi|315416783|gb|ADU13424.1| threonyl-tRNA synthetase [Asticcacaulis excentricus CB 48]
          Length = 640

 Score =  695 bits (1793), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 326/650 (50%), Positives = 441/650 (67%), Gaps = 14/650 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           I LTFPDG+++++    TG  +AE +S+SLAKKA  + +NG + DL  P+    +IEI+T
Sbjct: 2   IDLTFPDGAVRSYESGVTGRSIAEGLSKSLAKKAAMLRLNGDLYDLDRPIESSAAIEILT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            EDP  L VIRH  AH++A+AVQ ++P  QV IGP IEDGFYYDF +++PFS D+L +IE
Sbjct: 62  REDPALLEVIRHDTAHLLAQAVQELFPGTQVTIGPAIEDGFYYDFARDEPFSLDDLPKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE-WFDL 182
           KKM+E++ RD   +++    + A + FE   E YK EI+  +P  E +T+YR G+ W DL
Sbjct: 122 KKMKELVDRDDKIVREVWERDAAIQHFEEIGEHYKAEIIRDLPGTETITVYRHGDSWKDL 181

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH  S+  + K FKL K+AGAYWRGD N   L RIYGTAW ++++L  Y+  LEE+E
Sbjct: 182 CRGPHFPSSKFIGKAFKLTKLAGAYWRGDHNNAQLQRIYGTAWTSEEDLQAYITRLEEAE 241

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLD 301
           KRDHRKL R+M+LFH+ E+G G++FWH  GW +++TL +YMRR++    Y E+ TPQVLD
Sbjct: 242 KRDHRKLGRQMNLFHMQEEGRGMVFWHPHGWTLWRTLEAYMRRRLDAAGYVEVKTPQVLD 301

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           +  W++SGHWD YR NMF  +  +       T +LKPMNCPGHV +F  GL+SY+ELP+R
Sbjct: 302 RTFWEKSGHWDKYRPNMFVCETVEG-----ETLSLKPMNCPGHVQIFKVGLRSYKELPIR 356

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AEFG+ +R EPSGSLHGLMRVRGFTQDDAH+FC ++Q+  E  K   L   ++ D G +
Sbjct: 357 MAEFGACHRYEPSGSLHGLMRVRGFTQDDAHIFCREDQIVEETTKFITLCRQVHADLGMQ 416

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              + L+TRPE R GSD  WD      K      + +    +   +  G+GAFY PK ++
Sbjct: 417 AEHIALATRPEVRAGSDEFWD------KAEAQMAEAARAAGVEPVIAEGDGAFYAPKLDF 470

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
           I++DAIGR W CGTIQ+D+ LP R  A YV     +  PVM+HRA+ GS ERFIGI+IEN
Sbjct: 471 IVRDAIGRTWTCGTIQLDYVLPERLGAEYVAEDGSRQRPVMLHRAILGSFERFIGIIIEN 530

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  PLWL+PIQ +V  ITS A +YAQ++A+ L+S  L ++TD RNE INYKIREHS+ 
Sbjct: 531 YGGKFPLWLAPIQVVVAPITSDANDYAQQVASKLRSVGLRVDTDLRNEKINYKIREHSLA 590

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           K+P+I + G KEA    + +R  G      +S+  A   L  ESLPPD +
Sbjct: 591 KVPVIAVVGRKEAETGEVALRYLGQEGQTVLSVDSAAEQLRTESLPPDLK 640


>gi|121605747|ref|YP_983076.1| threonyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2]
 gi|166225475|sp|A1VR77|SYT_POLNA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|120594716|gb|ABM38155.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Polaromonas
           naphthalenivorans CJ2]
          Length = 635

 Score =  694 bits (1792), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 324/632 (51%), Positives = 447/632 (70%), Gaps = 15/632 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           I++T PD S +++    T ++VA SI   LAK A+   ++GK+ D S  + + S + I+T
Sbjct: 2   IQITLPDSSKRDYSGPVTVAEVAASIGTGLAKAALGGKVDGKLVDTSFLISQDSALSIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   L +IRHS AH++A AV+ ++PE QV IGP+IE+GF+YDF  ++PF+ ++L  IE
Sbjct: 62  AKDAEGLELIRHSAAHLLAYAVKELFPEAQVTIGPVIENGFFYDFSYKRPFTPEDLVAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M E++A+D P  ++ L  ++A   F+S  E YK EI+ SIPA E+V+LYR+G++ DLC
Sbjct: 122 KRMAELVAKDEPVTRRVLPRDEAVAYFKSLGEYYKAEIIASIPANEDVSLYREGKFEDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV STG++K FFKLMKVAGAYWRGD +  ML RIYGTAW T+ EL QYL  LEE++K
Sbjct: 182 RGPHVPSTGKLK-FFKLMKVAGAYWRGDHHNEMLQRIYGTAWATKDELQQYLTMLEEADK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQ 302
           RDHRKL +E+DLFHI +   G++FWH KGW ++Q +  YMR+  +++ Y+E+  PQ+LD+
Sbjct: 241 RDHRKLGKELDLFHIDDHSPGLVFWHPKGWTVWQGVEQYMRKVYQNNGYQEVKGPQLLDK 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+++GHWD YR NMF       T  + R FALKPMNCPGH+ +F  G+KSYR+LP+R 
Sbjct: 301 TLWEKTGHWDKYRDNMFT------TESEKRDFALKPMNCPGHILIFKQGIKSYRDLPLRY 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG  +RNEP+G LHG+MRVRGFTQDD H+FCT+EQ+  EC+    L+  +Y DFGF+ 
Sbjct: 355 GEFGQCHRNEPTGGLHGIMRVRGFTQDDGHIFCTEEQILKECVDYTTLLQKVYTDFGFKN 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+ K++TRPE R+GSD  WD AE+ +   +++++ S        +  GEGAFYGPK EY 
Sbjct: 415 IIYKVATRPEARIGSDESWDKAEHAL---IESLRASG---CEFEISPGEGAFYGPKIEYT 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LKDAIGR WQCGTIQVDF++P R +A YV     +  PVM+HRA+ GS+ERFIGI+IE  
Sbjct: 469 LKDAIGRQWQCGTIQVDFSMPERLDAEYVGEDGARHRPVMLHRAIVGSLERFIGILIEEH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G LP WL+P Q  V TIT S  EYA+ +A  L++  L +  D RNE I YKIREHS++K
Sbjct: 529 AGALPTWLAPEQVSVLTITDSQAEYARGVAKTLQNQGLRVNLDLRNEKITYKIREHSLQK 588

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           +P I++ GDKE +  ++ +R  G+     +SL
Sbjct: 589 LPFILVVGDKEMAAGAVSVRARGNKDLGVMSL 620


>gi|70733467|ref|YP_263242.1| threonyl-tRNA synthetase [Pseudomonas fluorescens Pf-5]
 gi|68347766|gb|AAY95372.1| threonyl-tRNA synthetase [Pseudomonas fluorescens Pf-5]
          Length = 629

 Score =  694 bits (1792), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 322/636 (50%), Positives = 445/636 (69%), Gaps = 14/636 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           I++T PDG+ + +    +  +VA SI   LAK AVA  +NG++ D    +  +  + I+T
Sbjct: 2   IRITLPDGACREYDQPLSVFEVAASIGSGLAKAAVAGRVNGQLVDCDYLLHSDARLSIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
             DP  L V+RHSCAH++A AV+ ++P  QVAIGP+IEDGF+YDF  E+PF++++L  IE
Sbjct: 62  ARDPEGLEVLRHSCAHLLAMAVKQLFPSAQVAIGPVIEDGFFYDFAHERPFTTEDLELIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M  + A +    ++ LS E+A + F  + E YKVE++  +P    ++LYRQG++ DLC
Sbjct: 122 ARMHSLAATNHSVRRRELSREQALQHFADQGEHYKVELIRDLPPDAVLSLYRQGDFEDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+RSTGQ++ F KL KVAGAYWRGD+    L RIYGT W ++ EL  YL  LE++++
Sbjct: 182 RGPHLRSTGQLRAF-KLTKVAGAYWRGDARNAPLQRIYGTCWGSRPELEAYLLRLEQAQQ 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH  +   G +FWH KGW +FQ LI YMRR+ +   Y+E+NTP V+D+
Sbjct: 241 RDHRKLGQQLDLFHFDDCAPGSVFWHAKGWTLFQELIGYMRRRQEQAGYQEVNTPDVMDR 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW +YR +MF       T +D RTFALKPMNCPG VA+F HG KSYR+LP+R+
Sbjct: 301 GLWETSGHWQNYRDHMFTT-----TTQDQRTFALKPMNCPGAVAIFGHGRKSYRDLPLRI 355

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFG V+R EPSG+LHGL+RVR FTQDDAH+FCT +QM +EC     L+  IYK+FGF++
Sbjct: 356 AEFGKVHRYEPSGALHGLLRVRHFTQDDAHIFCTPQQMQSECAATIALVFDIYKEFGFDQ 415

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + VKLSTRP+ R+GSD +WD  E  + G L ++      RIN G    EGAFYGPK E++
Sbjct: 416 VAVKLSTRPDHRIGSDEVWDQLEEALVGALQSMHIDY--RINPG----EGAFYGPKLEFV 469

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+DAIGRDWQCGT+QVD NLP RF   Y++   E+C PVM+HRA+FGS+ERFIGI++E+ 
Sbjct: 470 LRDAIGRDWQCGTLQVDLNLPERFAISYIDERGERCQPVMLHRALFGSLERFIGILLEHH 529

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G LPLWL+P QA+V  I+ +  +YA+ I++ L+ H L    D RNE I YKIREHS++K
Sbjct: 530 GGALPLWLAPQQAVVLNISEAQADYARAISDSLRRHGLRASADLRNEKIGYKIREHSLQK 589

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           +P +++ G+KE     + +R        ++SL  A+
Sbjct: 590 VPYLLVVGEKEKDGGYVSLRSRNGEDLGRLSLEQAL 625


>gi|167648480|ref|YP_001686143.1| threonyl-tRNA synthetase [Caulobacter sp. K31]
 gi|189083602|sp|B0T0Z7|SYT_CAUSK RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|167350910|gb|ABZ73645.1| threonyl-tRNA synthetase [Caulobacter sp. K31]
          Length = 659

 Score =  694 bits (1791), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/656 (50%), Positives = 442/656 (67%), Gaps = 19/656 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE------GS 58
           I L FPDGS + +   +TG DVA SIS+SL KKA+ + ++GK+ DL  P+          
Sbjct: 2   IDLIFPDGSARQYADGSTGRDVAASISKSLEKKALLIKLDGKLLDLDRPLTPDLLGGGNR 61

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
            EIIT + P +L VIRH  AH++AEAVQ ++P  QV IGP +EDGFYYDF +++PFS D+
Sbjct: 62  FEIITRDSPDALEVIRHDTAHVLAEAVQELFPGTQVTIGPNVEDGFYYDFARDEPFSLDD 121

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L +IE++M++I+ RD    ++ +  + A   FE+  E+YK +I+  +PA + +T+Y QGE
Sbjct: 122 LPKIEERMRQIVDRDEKIRREEVDRDAAIADFEAMGESYKAQIIRDLPASDTITVYHQGE 181

Query: 179 -WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
            W DLCRGPH+ ST  V K FKL K+AGAYWRGD N   L RIYGT+W T+ +L  +L  
Sbjct: 182 KWKDLCRGPHLPSTKAVGKAFKLTKLAGAYWRGDQNNAQLQRIYGTSWATEADLEAHLKR 241

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINT 296
           +EE+E+RDHRKL + MDLFHI E+G G++FWH KGW ++  L +YMRR++    Y E+ T
Sbjct: 242 IEEAERRDHRKLGKTMDLFHIQEEGKGMVFWHPKGWTLYLALEAYMRRRLDAAGYREVKT 301

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           PQ+LD+ LW++SGH + +   MF  + A+  +      A+KPMNCPGH+ +FN G KSYR
Sbjct: 302 PQILDKSLWERSGHAEKFGHAMFMCESAEGEV-----LAVKPMNCPGHIQIFNVGQKSYR 356

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ELP+R+AEFG+ +R EPSG++HG+MRVR FTQDDAH+FC +EQ+  E  +   L+ S+Y 
Sbjct: 357 ELPLRMAEFGACHRYEPSGAMHGIMRVRAFTQDDAHIFCREEQVTEESARFIELLRSVYS 416

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           D G      K STRPE R G DA+WD      K        +        +  GEGAFYG
Sbjct: 417 DLGMHLADTKFSTRPELRAGEDAVWD------KAEAALSAAAEAAGETLVLQEGEGAFYG 470

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK E+ LKDAIGR WQCGT+Q+DF LP R +A YV     K  PVM+HRA+ GS ERFIG
Sbjct: 471 PKLEFSLKDAIGRVWQCGTLQLDFVLPERLDAEYVAEDGSKKRPVMLHRAILGSFERFIG 530

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           I++EN+ G+LPLWL+P+Q +V TITS A +YAQ +A  L S  +  E DFRNE INYKIR
Sbjct: 531 ILLENYAGHLPLWLAPVQVVVATITSDADDYAQRVAERLTSMGIRAEVDFRNEKINYKIR 590

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           EHS+ K+P+I + G KEA    + +RR G    + +SL DA+  LT+E+ PPD  +
Sbjct: 591 EHSLAKVPVIAVVGRKEAENGEVALRRLGGEGQKVLSLEDAVRALTEEATPPDLAR 646


>gi|126725645|ref|ZP_01741487.1| threonyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150]
 gi|126704849|gb|EBA03940.1| threonyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150]
          Length = 649

 Score =  694 bits (1791), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/653 (50%), Positives = 441/653 (67%), Gaps = 10/653 (1%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP+++ LTFPDG+ +  P   T  +VA  IS SL KKA++  +NG+  DL+ P+  + SI
Sbjct: 1   MPNNVTLTFPDGNTREVPAGTTAGEVASGISTSLGKKAISAQVNGEHFDLAWPIENDASI 60

Query: 60  EIIT-PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
            I T  E   +L +IRH  AH+MA AVQ++WP+V+V IGP+IE+G+YYDFD+ +PF+ ++
Sbjct: 61  AINTMKETGPALELIRHDFAHVMARAVQALWPDVKVTIGPVIENGWYYDFDRTEPFTPED 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L  IEKKM+EII        +     +A + +    E YKVE++ESIP  E + +Y  GE
Sbjct: 121 LGAIEKKMKEIINLRDVVKTEVWDRARAIQHYNDLGEPYKVELIESIPGDEPLRMYWHGE 180

Query: 179 WFDLCRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           W DLCRGPH++ TGQ+    FKLM VAGAYWRGDS+R ML RIYG A+  ++ L  ++ F
Sbjct: 181 WQDLCRGPHLQHTGQLPADAFKLMSVAGAYWRGDSDRAMLQRIYGVAFQNKEGLRDHMTF 240

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINT 296
           LEE+ KRDHRKL R+MDLFH+ E+  G +FWH  GW+I+ TL  +MRRK +   Y E+NT
Sbjct: 241 LEEAAKRDHRKLGRDMDLFHMQEEAPGQVFWHPNGWRIYTTLQDFMRRKQVAGGYVEVNT 300

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           PQV+D+ LW+ SGHW+ Y+ NMF V+  ++  ++    ALKPMNCP HV +FN GLKSYR
Sbjct: 301 PQVVDRKLWEASGHWEKYQENMFIVEVDEEHAREKAVNALKPMNCPCHVQIFNVGLKSYR 360

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +LP+R+AEFGS  R EPSG+LHG+MRVRGFTQDD H+FC + Q+  E       + SIYK
Sbjct: 361 DLPIRMAEFGSCNRYEPSGALHGIMRVRGFTQDDGHIFCEESQIEEETAIYIEFLTSIYK 420

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           D GFE   VK S RPE R GSD +WD AE  +   L+  + +    I   +  GEGAFYG
Sbjct: 421 DLGFENFRVKFSDRPEVRAGSDEVWDRAETAL---LNATRAAG---IEPEMNPGEGAFYG 474

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK E++L DAIGRDWQCGT QVDF LP R +A YV     K  PVM+HRA  GS ERFIG
Sbjct: 475 PKLEFVLTDAIGRDWQCGTHQVDFVLPERLDANYVGQDGAKHRPVMLHRATLGSFERFIG 534

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           I+IE   G LP WL+P Q +V +I + A +YAQE+   L++  +  E D RNE INYK+R
Sbjct: 535 ILIEEHAGKLPFWLAPRQVVVASIVTDANDYAQEVVAELRAAGVLAEADIRNEKINYKVR 594

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPD 649
           EHS+ K+P+I+  G KE +ER++ +RR G   +    L + +P L  E+ PPD
Sbjct: 595 EHSLGKVPVILAVGMKEVAERTVSVRRLGQKQSTVQELGEVVPALAIEATPPD 647


>gi|149916340|ref|ZP_01904860.1| threonyl-tRNA synthetase [Roseobacter sp. AzwK-3b]
 gi|149809794|gb|EDM69646.1| threonyl-tRNA synthetase [Roseobacter sp. AzwK-3b]
          Length = 663

 Score =  693 bits (1789), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 334/650 (51%), Positives = 442/650 (68%), Gaps = 10/650 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEI 61
           + I LTFPDG+ +++    T +DVA  IS SLAKKA++  ++G+  DL  P+++  SI I
Sbjct: 2   AQISLTFPDGNSRSYDAGVTAADVAADISTSLAKKAISATLDGQHWDLQWPIQQDSSIAI 61

Query: 62  ITPED-PRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            T +D  ++L +IRH  AHIMA AVQ +WP+V+V IGP+IE+G+YYDFD++ PF+ ++L 
Sbjct: 62  NTMKDEAQALELIRHDLAHIMARAVQELWPDVKVTIGPVIENGWYYDFDRKDPFTPEDLG 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEKKM+EII    P   +     +A + +E   E +KVE++E+IP  E + +Y  G W 
Sbjct: 122 VIEKKMKEIINLRDPVRTEIWDRARAVKHYEDSGEPFKVELIEAIPGTEPLRMYWHGPWQ 181

Query: 181 DLCRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           DLCRGPH+++TGQV    FKLM VAGAYWRGDSNR ML RIYG A+  +++L  YL FLE
Sbjct: 182 DLCRGPHLQNTGQVPADAFKLMSVAGAYWRGDSNRQMLQRIYGVAFLNREKLKDYLTFLE 241

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+EKRDHRKL REMDLFH+ E+  G IFWH  GW I+ TL  YMRR+ +   Y E+NTPQ
Sbjct: 242 EAEKRDHRKLGREMDLFHMQEEAPGQIFWHPNGWTIYTTLQDYMRRQQRRGGYVEVNTPQ 301

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW+ SGHWD Y+ +MF V+  +D  ++    ALKPMNCP HV +FN GLKSYR+L
Sbjct: 302 VVDRKLWEASGHWDKYQEHMFIVEVDEDHAREKSINALKPMNCPCHVQIFNRGLKSYRDL 361

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFGS  R EPSG+LHG+MRVRGFTQDDAH+FC ++Q+  E  K    +  IY+D 
Sbjct: 362 PLRMAEFGSCNRYEPSGALHGIMRVRGFTQDDAHIFCREDQIEAETKKFIGFLSEIYRDL 421

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF    VK S RPEKR GSD +WD +E+ +K          +      + LGEGAFYGPK
Sbjct: 422 GFSDFKVKFSDRPEKRAGSDDVWDKSESALKAATAAAGADFE------LNLGEGAFYGPK 475

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E++L DAIGRDWQCGT+QVDF LP R +A Y+     K  PVM+HRAV GS ERFIGI+
Sbjct: 476 LEFVLTDAIGRDWQCGTLQVDFVLPERLDATYIAEDGAKHRPVMLHRAVLGSFERFIGIL 535

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE   G LP W++P Q +V +I S A  Y Q++   L +  +  E D RNE INYK+REH
Sbjct: 536 IEEHAGKLPFWMAPRQVVVASIVSEANAYVQDVVARLVAAGVRAEADIRNEKINYKVREH 595

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
           S+ K+P+I+ CG KE  + ++ +RR G   +    L D    L +E+ PP
Sbjct: 596 SVGKVPVILACGMKEVEDGTVSLRRLGEKQSTVQPLADVTEALKREATPP 645


>gi|114799933|ref|YP_761871.1| threonyl-tRNA synthetase [Hyphomonas neptunium ATCC 15444]
 gi|123027650|sp|Q0BXC2|SYT_HYPNA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|114740107|gb|ABI78232.1| threonyl-tRNA synthetase [Hyphomonas neptunium ATCC 15444]
          Length = 657

 Score =  693 bits (1789), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 325/662 (49%), Positives = 453/662 (68%), Gaps = 23/662 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           I +T PDGS + +   A+  DVAESIS+SLAKKA+A  ++G++ DL  P+  + S+ IIT
Sbjct: 2   INVTLPDGSKREYAEGASPLDVAESISKSLAKKALAAKVDGQMWDLVRPLEGDASVAIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
             DP  L +IRH  AH++A+AVQ ++P+ QV IGP+I+DGFYYDF +++PFS+D+  +IE
Sbjct: 62  DRDPEGLELIRHDAAHVLAQAVQELYPDTQVTIGPVIDDGFYYDFARKEPFSTDDFDKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESI-PAKENVTLYRQGEWFDL 182
            +M+EI+  D P +++ L  ++A   F+S  E YK +I++ I P  E +T+YRQG+WFDL
Sbjct: 122 ARMREIVDADYPIVREVLGKDEAIATFKSLGEEYKAQIIDDIIPPGEQITVYRQGKWFDL 181

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ STG++ K FKLMK+AGAYWRGD    ML R+YGTAW  +++L  +L  LEE+E
Sbjct: 182 CRGPHLPSTGKLPKAFKLMKLAGAYWRGDHRNEMLQRMYGTAWANEKDLKDHLTRLEEAE 241

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLD 301
           KRDHRKL  ++DLFH   +  G +FWH KG+ I++ L +Y+RR+   D Y E+ TPQ+L+
Sbjct: 242 KRDHRKLGAQLDLFHFQPEAQGSVFWHPKGFMIWRELEAYIRRQQDADGYVEVKTPQLLN 301

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRT-----------FALKPMNCPGHVAVFNH 350
              W++SGHW  +R NMF V    D I    +            ALKPMNCP HV +F +
Sbjct: 302 SVFWEKSGHWSKFRENMFVVP---DEIPSTESDAPILSGEGELMALKPMNCPAHVQIFKN 358

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
             +SYR+LP+R+AEFG  +RNE  G+LHGLMRVR  TQDDAH+FC ++Q+ +E L+   L
Sbjct: 359 AQRSYRDLPIRMAEFGCCHRNEAHGALHGLMRVRQMTQDDAHIFCREDQIADETLRFLKL 418

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
             ++Y DFG  +I  KL+TRPE R G+D  WD AE   K + D +  +    +   +  G
Sbjct: 419 FETVYGDFGLSEISYKLATRPEMRAGTDETWDRAE---KALADALTAAG---MTFSIAEG 472

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           EGAFYGPK E+ L DAIGR WQCGT Q+D+ LP R +A Y  S   K  PVM+HRAVFG+
Sbjct: 473 EGAFYGPKLEFHLTDAIGRTWQCGTFQLDYVLPERLDAEYTGSDGAKHRPVMLHRAVFGT 532

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
            ERF+GI+IEN+ G+ PLW+SP+Q +V  IT +A +YA+E A  L+   L +E D RNET
Sbjct: 533 FERFMGILIENYAGSFPLWMSPVQVVVAAITDAAGDYAEEAAAALRKAGLRVEVDKRNET 592

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDC 650
           INYK+REHS++K+P+I + G +EA +R + +RR GS   Q +SL +A+  L  E+  PD 
Sbjct: 593 INYKVREHSVQKVPVIAVVGAREAEDRKLALRRLGSNGQQIISLDEALVALADEARAPDL 652

Query: 651 QK 652
           ++
Sbjct: 653 KR 654


>gi|299533556|ref|ZP_07046932.1| threonyl-tRNA synthetase [Comamonas testosteroni S44]
 gi|298718462|gb|EFI59443.1| threonyl-tRNA synthetase [Comamonas testosteroni S44]
          Length = 639

 Score =  693 bits (1789), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/615 (53%), Positives = 437/615 (71%), Gaps = 19/615 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           I +T PDGS + +P   + +DVA SI   LAK A+A  INGKV D S  + + S + IIT
Sbjct: 2   INITLPDGSKREYPGPVSVADVAASIGSGLAKAALAGKINGKVVDTSFVIEQDSPLSIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   L VIRHS AH++A AV+ ++P+ QV IGP+IE+GFYYDF  ++PF+ ++LA IE
Sbjct: 62  AKDADGLEVIRHSTAHLLAYAVKELFPDAQVTIGPVIENGFYYDFSYKRPFTPEDLAAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           KKM E+  +D   +++ L  ++A + F+   EAYK EI+ SIP+ E+V+LYR+G + DLC
Sbjct: 122 KKMTELANKDEQVVRRVLPRDEAVQYFKGIGEAYKAEIIASIPSNEDVSLYREGAFEDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV STG++K F KLMKVAGAYWRGD    ML RIYGTAW T+ EL  YL+ LEE+EK
Sbjct: 182 RGPHVPSTGKLKHF-KLMKVAGAYWRGDHRNEMLQRIYGTAWATKDELKDYLFRLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQ 302
           RDHRKL RE+DLFHI E   G +FWH KGW ++Q +  YMRR  +D+ Y+E+  PQ+LD+
Sbjct: 241 RDHRKLGRELDLFHIDEHSPGTVFWHPKGWAVWQQVEQYMRRVYQDNGYQEVKAPQILDK 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+++GHWD YR NMF       T  + R +ALKPMNCPGH+ +F  G+KSYR+LP+R 
Sbjct: 301 GLWEKTGHWDKYRENMFT------TDSEKREYALKPMNCPGHIIIFKQGIKSYRDLPLRF 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG+ +RNEP+GSLHG+MRVR FTQDD H+FCT++Q+  E     +L+  +Y DFGF  
Sbjct: 355 GEFGNCHRNEPTGSLHGIMRVRAFTQDDGHIFCTEDQIQAEVTAFTSLLQKVYADFGFTN 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+ +LSTRPEKR+G+D  WD AEN +    + ++ S         L GEGAFYGPK EY 
Sbjct: 415 ILYRLSTRPEKRIGTDEAWDKAENALA---EGLRASG---CEFEYLPGEGAFYGPKIEYT 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LKDA+GR+WQCGTIQVD N+P R +A +V    E+  P+M+HRA+ GS+ERFIGI++E+ 
Sbjct: 469 LKDALGREWQCGTIQVDPNMPERLDAEFVGEDGERHRPIMLHRAILGSLERFIGILVEHH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLK----SHHLSIETDFRNETINYKIREH 598
            G LP WL+P+QA V  IT +  +YAQE+A  L+    +  L + TD RNE I YKIREH
Sbjct: 529 SGALPAWLAPVQAAVLNITDAQADYAQEVAQKLQKALPNQSLRVVTDLRNEKITYKIREH 588

Query: 599 SIKKIPIIIICGDKE 613
           S++K+P I++ GDKE
Sbjct: 589 SMQKLPYILVAGDKE 603


>gi|295687966|ref|YP_003591659.1| threonyl-tRNA synthetase [Caulobacter segnis ATCC 21756]
 gi|295429869|gb|ADG09041.1| threonyl-tRNA synthetase [Caulobacter segnis ATCC 21756]
          Length = 658

 Score =  693 bits (1788), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 330/653 (50%), Positives = 445/653 (68%), Gaps = 20/653 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR------EGS 58
           I L FPDGS + +P  ATG DVA +IS+SL KKA+ + ++G++ DL  P+       E  
Sbjct: 2   IDLVFPDGSSRQYPDGATGRDVAAAISKSLEKKALLIKLDGQLLDLDRPLTPDLLAGERK 61

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
            EI+T E P +L  IRH  AH++AEAVQ ++P  QV IGP +EDGFYYDF +++PFS D+
Sbjct: 62  FEILTREAPEALDTIRHDTAHVLAEAVQELFPGTQVTIGPNVEDGFYYDFARDEPFSLDD 121

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L +IEK+M+EI+ RD    ++    E+A + F+   E YK +I+  +P  + +T+YRQG 
Sbjct: 122 LEKIEKRMKEIVDRDEKISREVWDREEAIKHFDDIGEQYKAQIIRDLPPTDTITVYRQGN 181

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           W DLCRGPH+ ST  V K FKL K+AGAYWRGD N   L RIYGTAW ++ +L  YL  +
Sbjct: 182 WKDLCRGPHLPSTKHVGKAFKLTKLAGAYWRGDQNNAQLQRIYGTAWASEADLDAYLKRI 241

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
           EE+EKRDHRKL + MDLFHI E+G G++FWH KGW +++ L  YMRR++    Y+E+ TP
Sbjct: 242 EEAEKRDHRKLGKTMDLFHIQEEGKGMVFWHPKGWALYRVLEDYMRRRLDAAGYKEVKTP 301

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           Q+LD+ LW++SGH + +   MF  + A+  +      A+KPMNCPGH+ +FN G KSYRE
Sbjct: 302 QILDKSLWEKSGHAEKFGHAMFMCESAEGEV-----LAVKPMNCPGHIQIFNVGQKSYRE 356

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFG+ +R EPSG++HG+MRVR FTQDDAH+FC +EQ+  E  +   L+ S+Y D
Sbjct: 357 LPLRMAEFGACHRYEPSGAMHGIMRVRAFTQDDAHIFCREEQVTEESARFIELLRSVYND 416

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL-GEGAFYG 476
            G      K STRP+ R G+D +WD AE+        +  +++    T VL  GEGAFYG
Sbjct: 417 LGMTLADTKFSTRPDLRAGTDEVWDKAES-------ALSAAAEAAGETLVLQPGEGAFYG 469

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK E+ LKDAIGR WQCGT+Q+DF LP R +A YV+    K  PVM+HRA+ GS ERFIG
Sbjct: 470 PKLEFSLKDAIGRVWQCGTLQLDFVLPERLDAEYVSEDGSKKRPVMLHRAILGSFERFIG 529

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           I++ENF G LP+WL+P Q +V TITS A +YA+E+   L    +  E D RNE INYKIR
Sbjct: 530 ILLENFAGALPVWLAPTQVVVATITSDADDYAREVVETLTKLGMRAELDLRNEKINYKIR 589

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPD 649
           EHS+ K+P+I + G KEA  R + +RR G      +SL +AI +LT ++ PPD
Sbjct: 590 EHSLAKVPVIAVVGRKEAETRQLALRRLGGEGQSILSLEEAISVLTSDATPPD 642


>gi|221066194|ref|ZP_03542299.1| threonyl-tRNA synthetase [Comamonas testosteroni KF-1]
 gi|220711217|gb|EED66585.1| threonyl-tRNA synthetase [Comamonas testosteroni KF-1]
          Length = 639

 Score =  693 bits (1788), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 327/615 (53%), Positives = 437/615 (71%), Gaps = 19/615 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           I +T PDGS + +P   + ++VA SI   LAK A+A  INGKV D S  + + S + IIT
Sbjct: 2   INITLPDGSKREYPGPVSVAEVAASIGSGLAKAALAGKINGKVVDTSFVIEQDSPLSIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   L VIRHS AH++A AV+ ++P+ QV IGP+IE+GFYYDF  ++PF+ ++LA IE
Sbjct: 62  AKDADGLEVIRHSTAHLLAYAVKELFPDAQVTIGPVIENGFYYDFSYKRPFTPEDLAAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           KKM E+  +D   +++ L  ++A + F+   EAYK EI+ SIP+ E+V+LYR+G + DLC
Sbjct: 122 KKMTELANKDEQVVRRVLPRDEAVQYFKGLGEAYKAEIIASIPSNEDVSLYREGAFEDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV STG++K F KLMKVAGAYWRGD    ML RIYGTAW T+ EL  YL+ LEE+EK
Sbjct: 182 RGPHVPSTGKLKHF-KLMKVAGAYWRGDHRNEMLQRIYGTAWATKDELKDYLFRLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQ 302
           RDHRKL RE+DLFHI E   G +FWH KGW ++Q +  YMRR  +D+ Y+E+  PQ+LD+
Sbjct: 241 RDHRKLGRELDLFHIDEHSPGTVFWHPKGWAVWQQVEQYMRRVYQDNGYQEVKAPQILDK 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+++GHWD YR NMF       T  + R +ALKPMNCPGH+ +F  G+KSYR+LP+R 
Sbjct: 301 GLWEKTGHWDKYRENMFT------TDSEKREYALKPMNCPGHIIIFKQGIKSYRDLPLRF 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG+ +RNEP+GSLHG+MRVR FTQDD H+FCT++Q+  E     +L+  +Y DFGF  
Sbjct: 355 GEFGNCHRNEPTGSLHGIMRVRAFTQDDGHIFCTEDQIQAEVTAFTSLLQKVYADFGFTN 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+ +LSTRPEKR+G+D  WD AEN +    + ++ S         L GEGAFYGPK EY 
Sbjct: 415 ILYRLSTRPEKRIGTDEAWDKAENALA---EGLRASG---CEFEYLPGEGAFYGPKIEYT 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LKDA+GR+WQCGTIQVD N+P R +A +V    E+  P+M+HRA+ GS+ERFIGI++E+ 
Sbjct: 469 LKDALGREWQCGTIQVDPNMPERLDAEFVGEDGERHRPIMLHRAILGSLERFIGILVEHH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLK----SHHLSIETDFRNETINYKIREH 598
            G LP WL+P+QA V  IT +  +YAQE+A  L+    +  L + TD RNE I YKIREH
Sbjct: 529 SGALPAWLAPVQAAVLNITDAQADYAQEVAQKLQKALPNQSLRVVTDLRNEKITYKIREH 588

Query: 599 SIKKIPIIIICGDKE 613
           S++K+P I++ GDKE
Sbjct: 589 SMQKLPYILVAGDKE 603


>gi|302878338|ref|YP_003846902.1| threonyl-tRNA synthetase [Gallionella capsiferriformans ES-2]
 gi|302581127|gb|ADL55138.1| threonyl-tRNA synthetase [Gallionella capsiferriformans ES-2]
          Length = 637

 Score =  692 bits (1787), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 326/618 (52%), Positives = 443/618 (71%), Gaps = 15/618 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS ++F    T +DVA SI   LA+  +A  ++G V D S  +  +  + IIT +
Sbjct: 4   ITLPDGSQRSFDQSVTVADVAASIGAGLARATLAGRVDGSVVDSSFLIETDAQLAIITDK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L VIRHS AH+MA AV+ ++ +VQV IGP+IE+GF+YDF  ++PF+ ++L  IEK+
Sbjct: 64  DEAGLEVIRHSMAHLMAHAVKELFSDVQVTIGPVIENGFFYDFSYQRPFTPEDLLAIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M EI+ RD   ++  +  ++A   F+   E YK EI+ESIPA ++V+LY QGE+ DLCRG
Sbjct: 124 MAEIVKRDLKVVRSVVPRDEAVAYFKGIGENYKAEIIESIPADQDVSLYTQGEFTDLCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV STG++K  FKLMK+AGAYWRGDS   ML RIYGTAW  ++EL  YL+ LEE+EKRD
Sbjct: 184 PHVPSTGKLK-VFKLMKLAGAYWRGDSKNEMLQRIYGTAWAKKEELESYLHRLEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHL 304
           HRKL R++DLFH+ E   G++FWH KGW ++Q +  YMR K ++ DY+E+ TP ++D+ L
Sbjct: 243 HRKLGRQLDLFHMQETMPGMVFWHPKGWTLWQEIEQYMRAKFREHDYQEVRTPAIMDKTL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHW++YR NMF       T  + R +A+KPMNCPGHV ++NHGL SYR+LP+RLAE
Sbjct: 303 WEKSGHWENYRDNMFT------TASENRDYAVKPMNCPGHVQIYNHGLHSYRDLPLRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNE SGSLHGLMRVRGFTQDDAH+FCT+ Q+ +E      ++  +Y+DFGF+ ++
Sbjct: 357 FGSCHRNESSGSLHGLMRVRGFTQDDAHIFCTEAQVESEVSNFIVMLNEVYRDFGFDNVI 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           VKLSTRPEKRVGSD  WD AE  +   L       Q+R++  V  GEGAFYGPK E+ LK
Sbjct: 417 VKLSTRPEKRVGSDETWDKAEAGLAAAL------KQNRLDYEVQPGEGAFYGPKVEFTLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D++ R WQCGTIQ+DFNLP R +A +V+  + +  PVM+HRA+ GS+ERFIGI+IE+  G
Sbjct: 471 DSLDRMWQCGTIQLDFNLPVRLSAEFVDEDNTRKPPVMLHRAILGSMERFIGILIEHHAG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P+WLSP+Q ++  I+ +  EYA+EI  +L    + ++ D RNE I YKIREHS++K+P
Sbjct: 531 AFPMWLSPVQTVLMNISQAQEEYAKEIGQILARAGIRVQLDLRNEKITYKIREHSLQKLP 590

Query: 605 IIIICGDKEASERSIGIR 622
             +I GDKE S R I +R
Sbjct: 591 YQLIVGDKEVSGRLIAVR 608


>gi|254466098|ref|ZP_05079509.1| threonyl-tRNA synthetase [Rhodobacterales bacterium Y4I]
 gi|206687006|gb|EDZ47488.1| threonyl-tRNA synthetase [Rhodobacterales bacterium Y4I]
          Length = 648

 Score =  692 bits (1787), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 333/651 (51%), Positives = 444/651 (68%), Gaps = 10/651 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           + I LTFPDG+ +++    T + VA SIS SLAKKA++  +N +  DL  P+  + +I I
Sbjct: 2   AQISLTFPDGNARSYDAGVTPAQVAASISTSLAKKAISATVNDQHWDLQWPIESDATIAI 61

Query: 62  ITPEDP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            T +D  ++  +IRH  AH+MA AVQ IWP+ +V IGP+IE+G+YYDFD+ +PF+ ++L 
Sbjct: 62  HTMKDEVQANELIRHDLAHVMARAVQEIWPDTKVTIGPVIENGWYYDFDRAEPFTPEDLG 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEKKM+EII +      +    ++A + +    E YKVE++ESIP  E + +Y  G+W 
Sbjct: 122 AIEKKMKEIINKRDEVRTEVWERDRAIQHYTDNNEPYKVELIESIPGDEPLRMYWHGDWQ 181

Query: 181 DLCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           DLCRGPH++ TGQ+    FKLM +AGAYWRGDS+R ML RIYG A+  +++L  +L+ LE
Sbjct: 182 DLCRGPHLQHTGQLPGDAFKLMSIAGAYWRGDSSRAMLQRIYGVAFTGKEKLKAHLHMLE 241

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+ KRDHRKL REMDLFH+ E+  G IFWH  GWK++ TL  YMRR+  K  Y E+NTPQ
Sbjct: 242 EAAKRDHRKLGREMDLFHMQEEAPGQIFWHPNGWKVYTTLQDYMRRQQEKGGYVEVNTPQ 301

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW+ SGHW+ Y+ NMF V+  ++  ++    ALKPMNCP HV +FN GLKSYR+L
Sbjct: 302 VVDRRLWEASGHWEKYQENMFIVEVDEEHAREKAVNALKPMNCPCHVQIFNQGLKSYRDL 361

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFGS  R EPSG+LHG+MRVRGFTQDDAH+FC ++Q+  E  K  + +  IYKD 
Sbjct: 362 PLRMAEFGSCNRYEPSGALHGIMRVRGFTQDDAHIFCAEDQIEAETKKFIDFLSEIYKDL 421

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFEK  VK S RPEKR GSD +WD +E  +K   +    +    +N     GEGAFYGPK
Sbjct: 422 GFEKFSVKFSDRPEKRSGSDEVWDKSEAALKAATEAAGCAYD--LNP----GEGAFYGPK 475

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E++L DAIGRDWQCGT+QVDF LP R +A Y+ +   K  PVM+HRA  GS ERFIGI+
Sbjct: 476 LEFVLTDAIGRDWQCGTLQVDFVLPERLDATYIGADGAKHRPVMLHRATLGSFERFIGIL 535

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE   G LP WL+P Q +V +ITS A  Y QE+   LK   +  E D RNE INYK+REH
Sbjct: 536 IEEHAGKLPFWLAPRQVVVASITSDADAYVQEVVAELKKAGVRAEADIRNEKINYKVREH 595

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPD 649
           S+ K+P+I+  G +E  ER++ +RR G   T+  SL +    L  E+ PPD
Sbjct: 596 SVGKVPVILAVGHREVEERTVSVRRLGEKETKVESLENVTKALAAEATPPD 646


>gi|118595089|ref|ZP_01552436.1| Threonyl-tRNA synthetase, class IIa [Methylophilales bacterium
           HTCC2181]
 gi|118440867|gb|EAV47494.1| Threonyl-tRNA synthetase, class IIa [Methylophilales bacterium
           HTCC2181]
          Length = 635

 Score =  692 bits (1786), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 313/619 (50%), Positives = 450/619 (72%), Gaps = 15/619 (2%)

Query: 6   KLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITP 64
           +++ PDGS++++  + + +DVA+ I   LA+ A+A  +N ++ DLS  +  +  + I+T 
Sbjct: 3   EISLPDGSVRSYNTNVSVADVAQDIGEGLARAALAGIVNEQLVDLSHIISSDAELSIVTA 62

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           ++   + +IRHS AH++A AV+ ++PE QV IGP+I++GFYYDF  ++PF+ D+L  IEK
Sbjct: 63  KNDEGIDIIRHSTAHLLANAVKELFPEAQVTIGPVIDEGFYYDFSYKRPFTPDDLLVIEK 122

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
           KM E+  +D P  +  +  ++A + F    E YK +I+ESIP  E+V+LY+QG++ DLCR
Sbjct: 123 KMAELAKKDLPIERSIMPRKEAIQFFSDLGEHYKSQIIESIPQSESVSLYKQGDFVDLCR 182

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV ST ++K  FKLMKVAGAYWRGDSN  ML RIYGTAW  + EL +YLY LEE+EKR
Sbjct: 183 GPHVPSTAKLK-VFKLMKVAGAYWRGDSNNEMLQRIYGTAWANKDELKEYLYRLEEAEKR 241

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRKL +++DLFH+ ++  G++FWH KGW ++  +  YMR+  KD  Y+EI TP ++D+ 
Sbjct: 242 DHRKLGKQLDLFHMQDNAPGMVFWHPKGWSLWLAVEDYMRQMFKDYGYKEIKTPTIIDKS 301

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SGHW++Y+ NMF       T  + R +A+KPMNCPGHV VFN+ L SYR+LP+RLA
Sbjct: 302 LWEKSGHWENYQDNMFT------TASENRVYAVKPMNCPGHVEVFNNTLHSYRDLPLRLA 355

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT++Q+  E +  ++++   Y DFGF+ I
Sbjct: 356 EFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEDQIKEEVMVFNDMLFKAYADFGFKDI 415

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +V LSTRPEKRVGSD +WD AE  ++  L       +  ++  +  GEGAFYGPK EY L
Sbjct: 416 VVMLSTRPEKRVGSDEVWDRAEEALESAL------KETGLSYTMQPGEGAFYGPKIEYTL 469

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           KD++GR WQCGTIQ+DFNLP R  A Y++  + + +PVM+HRA+ GS+ERFIGI+IE++ 
Sbjct: 470 KDSLGRVWQCGTIQLDFNLPKRLGAEYIDEDNSRKNPVMLHRAIVGSMERFIGILIEHYA 529

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G+LPLWL+PIQ ++  I+ +  EYA+ +  + K   +  E+D RNE I YKIREHS+++I
Sbjct: 530 GSLPLWLAPIQVVLLNISDAQKEYAKTLETIFKEKGIRCESDLRNEKITYKIREHSMQRI 589

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++ GD+E  E+ + +R
Sbjct: 590 PYMVVLGDREMQEKQVTVR 608


>gi|238650420|ref|YP_002916272.1| threonyl-tRNA synthetase [Rickettsia peacockii str. Rustic]
 gi|259516667|sp|C4K0X3|SYT_RICPU RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|238624518|gb|ACR47224.1| threonyl-tRNA synthetase [Rickettsia peacockii str. Rustic]
          Length = 635

 Score =  691 bits (1784), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/643 (51%), Positives = 442/643 (68%), Gaps = 15/643 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I ++FPDGSIK F  + T  +VA +IS SLAK A+   ING++ DLS  +  +  + I+T
Sbjct: 2   INISFPDGSIKQFAKNITAYEVANAISMSLAKAAMVAEINGELQDLSIVIDNDCKLRILT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +DP  L +IRH  AH+ AEAV+ ++PE QV IGP IE+G+YYDF ++ PF++D+LA IE
Sbjct: 62  AKDPECLEIIRHDAAHLTAEAVKELFPETQVTIGPAIENGYYYDFARDTPFTTDDLAVIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            KMQE+  ++    ++    +KA E F+S  E YK EI+ SIPA E +TLYRQG + DLC
Sbjct: 122 AKMQELSQKNEQVTRELWDRDKAVEFFKSIGEHYKAEIIASIPAGEPITLYRQGNFIDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH  STG VK F KLMKVAGAYWRGDS   ML RIYGTAW T+++L  YL  LEE+EK
Sbjct: 182 RGPHAPSTGVVKHF-KLMKVAGAYWRGDSRNEMLQRIYGTAWATKEQLDSYLLMLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQ 302
           RDHRKL RE+DLFH  E+  G++FWH KGW I+ T+  Y+R+KI K+ Y E+ TP ++D+
Sbjct: 241 RDHRKLGRELDLFHFQEEAQGMVFWHDKGWSIYNTIEQYIRKKIRKNGYTEVKTPVLVDK 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW+ +R +MFA++  D      +T ALKPMNCP HV +F  G+KSYR+LP+R+
Sbjct: 301 SLWEASGHWEKFRDDMFALETDD------KTLALKPMNCPCHVQIFKQGIKSYRDLPLRM 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           +EFG  +RNE SG+LHGLMRVR   QDDAH+FC  EQ+ +E +    L+  +YKDFGF  
Sbjct: 355 SEFGLCHRNEASGALHGLMRVRSLVQDDAHIFCAAEQITDETVSFCKLLTEVYKDFGFTD 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I VK S RPE R GS+ +WD AEN +K  ++      Q      +  GEGAFYGPK E++
Sbjct: 415 IKVKFSDRPEIRAGSNEVWDKAENALKEAVE------QAGFTYTLNPGEGAFYGPKLEFV 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L DAIGR WQCGT+Q+DF LP R +A YV +  EK  PVM+HRA+ GS+ERFIGI+IE +
Sbjct: 469 LTDAIGRQWQCGTLQMDFVLPERLDASYVAASGEKKRPVMLHRAILGSLERFIGILIEEY 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  PLWL+P+Q  + TITS   +YA E+   L  + +  + +   + INYKIRE S +K
Sbjct: 529 AGRFPLWLAPVQVAIATITSDLNDYALEVQKALIDNGVRTDFNISPDKINYKIREFSNQK 588

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           IP+I + G +E   + + IRR G+T  + +S+   I ++ +E+
Sbjct: 589 IPMIAVIGKQEQKNKQVAIRRLGTTDQEVLSVEQLIAVVKEEN 631


>gi|89900130|ref|YP_522601.1| threonyl-tRNA synthetase [Rhodoferax ferrireducens T118]
 gi|89344867|gb|ABD69070.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Rhodoferax
           ferrireducens T118]
          Length = 669

 Score =  691 bits (1784), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 325/636 (51%), Positives = 444/636 (69%), Gaps = 19/636 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           I++T PDGS +++P   T ++VA SI   LAK A+A  ++GKV D S  +   S + I+T
Sbjct: 30  IQITLPDGSQRDYPAPVTVAEVAASIGSGLAKAALAGKVDGKVVDTSYLIEANSAVAIVT 89

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   L VIRHS AH++A AV+ ++P+ QV IGP+IE+GF+YDF  ++PF+ ++L  IE
Sbjct: 90  AKDAEGLEVIRHSTAHLLAYAVKELFPDAQVTIGPVIENGFFYDFSYKRPFTPEDLLAIE 149

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           +KM  + A+D P  ++ L  ++A   F+   E YK EI+ SIPA E+V+LYR+G++ DLC
Sbjct: 150 QKMAALAAKDEPVTRRVLPRDEAVAYFKGLGENYKAEIIASIPAGEDVSLYREGKFEDLC 209

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV STG++K FFKLMK+AGAYWRGD    ML RIYGTAW T+ EL Q+L  LEE+EK
Sbjct: 210 RGPHVPSTGKLK-FFKLMKLAGAYWRGDHRNEMLQRIYGTAWATKDELQQHLTMLEEAEK 268

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQ 302
           RDHRKL RE+DLFHI +   G++FWH KGW ++Q +  YMR+  +D+ Y+E+  PQ+LD+
Sbjct: 269 RDHRKLGRELDLFHIDDHAPGLVFWHPKGWTLWQGVEQYMRQVYRDNGYQEVKGPQILDK 328

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+++GHWD YR NMF       T  + R +ALKPMNCPGH+ +F  G+KSYR+LP+R 
Sbjct: 329 SLWEKTGHWDKYRENMFT------TESEKREYALKPMNCPGHILIFKQGIKSYRDLPLRY 382

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG  +RNEPSG LHG+MRVRGFTQDD H+FCT++Q+  EC+    L+  +Y DFGFE 
Sbjct: 383 GEFGQCHRNEPSGGLHGIMRVRGFTQDDGHIFCTEDQILQECVDYTALLQKVYADFGFEN 442

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+ K++TRPE+R+GSD +WD AE     ++++++ S ++     +  GEGAFYGPK EY 
Sbjct: 443 IIYKVATRPEQRIGSDDVWDKAE---AALIESLRASGRE---FEISPGEGAFYGPKIEYT 496

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LKDAIGR WQCGTIQVDF++P R +A YV     +  PVM+HRA+ GS+ERFIGI+IE  
Sbjct: 497 LKDAIGRHWQCGTIQVDFSMPERLDAEYVGEDGARHRPVMLHRAIVGSLERFIGILIEES 556

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIA----NLLKSHHLSIETDFRNETINYKIREH 598
            G LP WL+P+Q  V  IT +  EY +EI     N L    L    D RNE I +KIREH
Sbjct: 557 AGALPTWLAPVQVAVLNITDAQAEYCREIVEKLKNALPDQRLRAVADLRNEKITFKIREH 616

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           S++K+P I++ GDKE +  ++ +R  G      +SL
Sbjct: 617 SMQKLPYILVVGDKEKAAGTVAVRARGGLDLGVMSL 652


>gi|126740677|ref|ZP_01756363.1| threonyl-tRNA synthetase [Roseobacter sp. SK209-2-6]
 gi|126718192|gb|EBA14908.1| threonyl-tRNA synthetase [Roseobacter sp. SK209-2-6]
          Length = 649

 Score =  691 bits (1783), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 330/651 (50%), Positives = 441/651 (67%), Gaps = 10/651 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
           + I LTFPDG+ + F    T ++VA SIS SL KKA++  +NG   DL  P+  + SI I
Sbjct: 2   AQISLTFPDGNAREFDAGVTPAEVASSISTSLGKKAISATVNGAHWDLQWPIDTDASIAI 61

Query: 62  ITPED-PRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            T +D  ++  +IRH  AH+MA AVQ IWP+ +V IGP+IE+G+YYDFD+ +PF+ ++L 
Sbjct: 62  HTMKDEAQANELIRHDLAHVMARAVQEIWPDTKVTIGPVIENGWYYDFDRAEPFTPEDLG 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEKKM+EII +      +     +A   +    E YKVE++ESIP  E + +Y  G+W 
Sbjct: 122 AIEKKMKEIINKRDEVRTEVWDRPRAILHYSDNNEPYKVELIESIPGDEPLRMYWHGDWQ 181

Query: 181 DLCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           DLCRGPH++ TGQ+    FKLM +AGAYWRGDS+R ML RIYG A+  +++L  +L+ LE
Sbjct: 182 DLCRGPHLQHTGQLPGDAFKLMSIAGAYWRGDSDRAMLQRIYGVAFTGKEKLKAHLHMLE 241

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+ KRDHRKL REM+L+H+ E+  G +FWH  GWKI+ TL  YMRR + +D Y E+NTPQ
Sbjct: 242 EAAKRDHRKLGREMNLYHMQEEAPGQVFWHPNGWKIYTTLQDYMRRMQERDGYVEVNTPQ 301

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW+ SGHWD Y+ NMF V+  +D  ++    ALKPMNCP HV VFN GLKSYR+L
Sbjct: 302 VVDRKLWEASGHWDKYQENMFIVEVDEDHAREKAINALKPMNCPCHVQVFNQGLKSYRDL 361

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFGS  R EPSG+LHG+MRVRGFTQDD H+FC+++Q+ +E  K    +  +Y D 
Sbjct: 362 PLRMAEFGSCARYEPSGALHGIMRVRGFTQDDGHIFCSEDQIESETAKFIAFLSKVYADL 421

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF    +KLSTRPEKR+GSD  WD  E   K + D  K +  +     VL GEGAFYGPK
Sbjct: 422 GFHNWTIKLSTRPEKRIGSDESWDLVE---KALGDACKAAGYE---YEVLEGEGAFYGPK 475

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ L DAIGR+WQCGT+QVD NLP R  A ++     K  P M+HRA  GS ERFIGI+
Sbjct: 476 LEFTLTDAIGRNWQCGTLQVDPNLPERLEANFIGQDGNKHRPFMLHRACLGSFERFIGIL 535

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE   G LP WL+P Q +V +ITS A +Y  E+   L++  +  E D RNE INYK+REH
Sbjct: 536 IEEHAGKLPFWLAPRQVVVASITSDADDYVNEVVETLRAAGVRAEADIRNEKINYKVREH 595

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPD 649
           S+ K+P+I+  G +E  ER++ +RR G   T+   L + +  LT+E+ PPD
Sbjct: 596 SVGKVPVILAVGHREVEERTVSVRRLGEKQTKVEGLDETVAKLTQEATPPD 646


>gi|197103889|ref|YP_002129266.1| threonyl-tRNA synthetase [Phenylobacterium zucineum HLK1]
 gi|238690165|sp|B4RE95|SYT_PHEZH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|196477309|gb|ACG76837.1| threonyl-tRNA synthetase [Phenylobacterium zucineum HLK1]
          Length = 658

 Score =  691 bits (1783), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 333/650 (51%), Positives = 454/650 (69%), Gaps = 13/650 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           I+L FPDGS + FP   TG ++A  IS+SL KKA+ V ++G++ DL  P+ +G + +I+T
Sbjct: 2   IELVFPDGSKREFPDGVTGREIAAGISKSLEKKAILVEVDGELLDLERPLEKGGAFKILT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            E P +L  IRH  +HI+AEAVQ ++P  QV IGP IEDGFYYDF +E+PFS D+LA+IE
Sbjct: 62  REAPEALETIRHDVSHILAEAVQELFPGTQVTIGPAIEDGFYYDFAREEPFSLDDLAKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           ++M+EI+ RD P  ++    ++A   F    E YK +I+E+IPA E +T+YRQG+W DLC
Sbjct: 122 QRMKEIVDRDEPIRREEWDRDEAIRHFREIGEEYKAQIIEAIPAGEKITVYRQGQWKDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ ST    K FKL K+AGAYWRGD     L RIYGTAW ++ +L  Y+  LEE+EK
Sbjct: 182 RGPHLPSTRHAGKAFKLTKLAGAYWRGDHRNAQLQRIYGTAWASEADLEAYIQRLEEAEK 241

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL R+MDLFH+ E+G G++FWH KG  +++T+ SY+RR++ +  Y+E+ TPQVLD+
Sbjct: 242 RDHRKLGRQMDLFHMQEEGKGMVFWHEKGLTLWRTVESYVRRRLDEAGYQEVRTPQVLDR 301

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             W++SGHWD YR NMF   C  +  ++L   +LKPMNCPGHV +F  G KSYR+LP+R+
Sbjct: 302 VFWEKSGHWDKYRPNMFV--CETEEGEEL---SLKPMNCPGHVQIFKFGQKSYRDLPLRM 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFG+ +R EPSG+LHGLMRVR FTQDDAH+FC ++Q+  E  +   L  SI+ DFG E+
Sbjct: 357 AEFGACHRYEPSGALHGLMRVRAFTQDDAHIFCREDQIEEETARFIELANSIHADFGLER 416

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             + L+TRPE R GSD  WD AE  M      +  + +  +   +  G+GAFY PK +++
Sbjct: 417 DHIALATRPEVRAGSDEFWDKAEAQM------LAAARKAGVEPVIAEGDGAFYAPKLDWV 470

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LKD+IGR W CGTIQ+D+ LP R  A YV     K  PVM+HRA+ GS+ERFIG++IEN+
Sbjct: 471 LKDSIGRTWTCGTIQLDYVLPERLGAEYVAEDGSKQRPVMLHRAICGSLERFIGVLIENY 530

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  PLWL+P+Q +V TITS A +YA+  A  LK+  L +E D RNE INYK+REHS+ K
Sbjct: 531 AGAFPLWLAPVQVVVATITSDADDYARAAAAELKAKGLRVELDLRNEKINYKVREHSLAK 590

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           +P+I + G +EA E  + +RR GS   Q ++L +A   L  E+LPPD  +
Sbjct: 591 VPVIAVVGRREAEEGKVALRRLGSDGQQILALGEAAEALAMEALPPDLAR 640


>gi|67459371|ref|YP_246995.1| threonyl-tRNA synthetase [Rickettsia felis URRWXCal2]
 gi|73919821|sp|Q4UKU3|SYT_RICFE RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|67004904|gb|AAY61830.1| Threonyl-tRNA synthetase [Rickettsia felis URRWXCal2]
          Length = 635

 Score =  691 bits (1783), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 327/643 (50%), Positives = 445/643 (69%), Gaps = 15/643 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           I ++FPDGS+K F  + T  +VA +IS SLAK A+   ING++ DLS  +  +  + I+T
Sbjct: 2   INISFPDGSVKQFESNITAFEVANAISMSLAKAAMVAEINGELKDLSTIIENDCKLRILT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   L +IRH  AHI+AEA + ++P++QV IGP IE+GF+YDF K++PF+ D++A IE
Sbjct: 62  AKDSECLEIIRHDAAHIIAEAAKELFPDIQVTIGPAIENGFFYDFAKDKPFTPDDVAMIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M EI+ R+    ++    +KA E F+S  E YK EI+ SIPA E +TLYRQG + DLC
Sbjct: 122 ARMHEIVKRNEQITRELWDRDKAVEFFKSIGEHYKAEIIASIPAGEPITLYRQGSFIDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH  STG VK F KLMKVAGAYWRGDS   ML RIYGTAW T+++L  YL+ LEE+EK
Sbjct: 182 RGPHAPSTGFVKHF-KLMKVAGAYWRGDSRNEMLQRIYGTAWATKEQLDNYLFMLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQ 302
           RDHRKL RE+DLFH  E+  G++FWH KGW I+ T+  Y+R+KI K+ Y E+ TP ++D+
Sbjct: 241 RDHRKLGRELDLFHFQEEAQGMVFWHDKGWSIYNTIEQYIRKKIRKNGYTEVKTPVLVDK 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW+ +R +MFA++  D      +T ALKPMNCP HV +F  G+KSYR+LP+R+
Sbjct: 301 SLWEASGHWEKFREDMFALETDD------KTLALKPMNCPCHVQIFKQGIKSYRDLPLRM 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           +EFG  +RNE SG+LHGLMRVR   QDDAH+FC +EQ+ +E +    L+  +YKDFGF  
Sbjct: 355 SEFGLCHRNEASGALHGLMRVRSLVQDDAHIFCAEEQITDETVSFCKLLTEVYKDFGFTD 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I VK S RPE R GSD +WD AEN +K  ++  K      +N G    EGAFYGPK E++
Sbjct: 415 IKVKFSDRPEIRAGSDEVWDKAENALKEAVE--KAGFTYTLNPG----EGAFYGPKLEFV 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L DAIGR WQCGT+Q+DF LP R +A Y+ +  EK  PVM+HRA+ GS+ERFIGI+IE +
Sbjct: 469 LTDAIGRQWQCGTLQMDFVLPERLDASYIAASGEKKRPVMLHRAILGSLERFIGILIEEY 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P+WL+PIQ  + TITS   +YA E+   L  + +  + +   + INYKIRE S +K
Sbjct: 529 AGRFPIWLAPIQVAIATITSDLNDYALEVQKALIDNGVRTDINISPDKINYKIREFSNQK 588

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           IP+I + G +E   + + IRR G+T  + +S+   I ++ KE+
Sbjct: 589 IPMIAVIGKQEKENKHVTIRRLGTTDQEVLSIEQLIALIKKEN 631


>gi|83951679|ref|ZP_00960411.1| threonyl-tRNA synthetase [Roseovarius nubinhibens ISM]
 gi|83836685|gb|EAP75982.1| threonyl-tRNA synthetase [Roseovarius nubinhibens ISM]
          Length = 648

 Score =  691 bits (1783), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 327/653 (50%), Positives = 442/653 (67%), Gaps = 14/653 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEI 61
           + I LTFPDG+ +++    T  +VA  IS+SL KKA++  IN    DL  P++E + I I
Sbjct: 2   AQISLTFPDGNARSYEAGVTPGEVAADISKSLGKKAISATINDAHWDLQWPIQEDARIAI 61

Query: 62  ITPED-PRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            T  D P++  +IRH  AHIMA AVQ +WP+V+V IGP+IE+G+YYDFD+ +PF+ ++L 
Sbjct: 62  HTMADEPQANELIRHDLAHIMARAVQELWPDVKVTIGPVIENGWYYDFDRAEPFTPEDLG 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IEKKM+EII +      +     +A + +E   E +KVE++E+IP  E + +Y  G+W 
Sbjct: 122 EIEKKMREIINKRDEVRTEIWDRARAVKHYEDNGEPFKVELIEAIPGDEPLRMYWHGDWQ 181

Query: 181 DLCRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           DLCRGPH++ TGQV    FKLM VAGAYWRGDS+R ML RIYG A+  +++L  +L+ LE
Sbjct: 182 DLCRGPHLQHTGQVPADAFKLMSVAGAYWRGDSSRQMLQRIYGVAFTGKEKLKAHLHMLE 241

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+ KRDHRKL REMDLFH+ E+  G +FWH  GW I+  L  YMRR  +   Y E+NTPQ
Sbjct: 242 EAAKRDHRKLGREMDLFHMQEEAPGQVFWHPNGWTIYTELQDYMRRAQRAGGYVEVNTPQ 301

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHW+ Y+ +MF V+  ++  ++    ALKPMNCP HV +FN GLKSYR+L
Sbjct: 302 VVDRKLWEKSGHWEKYQEHMFIVEVDEEHAREKAVNALKPMNCPCHVQIFNQGLKSYRDL 361

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFGS  R EPSG+LHG+MRVRGFTQDD H+FC ++Q+ +E  +  + +  +Y+D 
Sbjct: 362 PLRMAEFGSCNRYEPSGALHGVMRVRGFTQDDGHIFCREDQIESETKRFIDFLSRVYRDL 421

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL--GEGAFYG 476
           GFE   VK S RPEKR GSD +WD AE  +K        S+ +  N    L  GEGAFYG
Sbjct: 422 GFENFSVKFSDRPEKRSGSDEVWDKAETALK--------SATEAANCSFTLNPGEGAFYG 473

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK E++L DAIGRDWQCGT+QVDF LP R +A Y+     K  PVM+HRA  GS ERFIG
Sbjct: 474 PKLEFVLTDAIGRDWQCGTLQVDFVLPERLDATYIGEDGAKHRPVMLHRATLGSFERFIG 533

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           I+IE   G LP WL+P Q +V +I S A +Y  E+   L++  +  E D RNE INYK+R
Sbjct: 534 ILIEEHAGKLPFWLAPRQVVVASIVSEADDYVHEVVAGLRAQGVRAEADIRNEKINYKVR 593

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPD 649
           EHS+ K+P+I+ CG +E  E+++ +RR G   T   +L D    L  E+ PPD
Sbjct: 594 EHSVGKVPVILACGLREVEEKTVSVRRLGEKQTSVQALADVTKALATEATPPD 646


>gi|165932872|ref|YP_001649661.1| threonyl-tRNA synthetase [Rickettsia rickettsii str. Iowa]
 gi|165907959|gb|ABY72255.1| threonyl-tRNA synthetase [Rickettsia rickettsii str. Iowa]
          Length = 644

 Score =  691 bits (1782), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/643 (51%), Positives = 442/643 (68%), Gaps = 15/643 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I ++FPDGSIK F  + T  +VA +IS SLAK A+   ING++ DLS  +  +    I+T
Sbjct: 11  INISFPDGSIKQFAKNITAYEVANAISMSLAKAAMVAEINGELQDLSIVIDNDCKFRILT 70

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +DP  L +IRH  AH+ AEAV+ ++PE QV IGP IE+G+YYDF +++PF++D+LA IE
Sbjct: 71  AKDPECLEIIRHDAAHLTAEAVKELFPETQVTIGPAIENGYYYDFARDKPFTNDDLAVIE 130

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            KMQE+  ++    ++    +KA E F+S  E YK EI+ SIPA E +TLYRQG + DLC
Sbjct: 131 AKMQELSQKNEQVTRELWDRDKAVEFFKSIGEHYKAEIIASIPAGEPITLYRQGNFIDLC 190

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH  STG VK F KLMKVAGAYWRGDS   ML RIYGTAW T+++L  YL  LEE+EK
Sbjct: 191 RGPHSPSTGVVKHF-KLMKVAGAYWRGDSRNEMLQRIYGTAWATKEQLDSYLLMLEEAEK 249

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQ 302
           RDHRKL RE+DLFH  E+  G++FWH KGW I+ T+  Y+R+KI K+ Y E+ TP ++D+
Sbjct: 250 RDHRKLGRELDLFHFQEEAQGMVFWHDKGWSIYNTIEQYIRKKIRKNGYTEVKTPVLVDK 309

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW+ +R +MFA++  D      +T ALKPMNCP HV +F  G+KSYR+LP+R+
Sbjct: 310 SLWEASGHWEKFRDDMFALETDD------KTLALKPMNCPCHVQIFKQGIKSYRDLPLRM 363

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           +EFG  +RNE SG+LHGLMRVR   QDDAH+FC  EQ+ +E +    L+  +YKDFGF  
Sbjct: 364 SEFGLCHRNEASGALHGLMRVRSLVQDDAHIFCAAEQITDETVSFCKLLTEVYKDFGFTD 423

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I VK S RPE R GS+ +WD AEN +K  ++      Q      +  GEGAFYGPK E++
Sbjct: 424 IKVKFSDRPEIRAGSNEVWDKAENALKEAVE------QAGFTYTLNPGEGAFYGPKLEFV 477

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L DAIGR WQCGT+Q+DF LP R +A YV +  EK  PVM+HRA+ GS+ERFIGI+IE +
Sbjct: 478 LTDAIGRQWQCGTLQMDFVLPERLDASYVAASGEKKRPVMLHRAILGSLERFIGILIEEY 537

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  PLWL+P+Q  + TITS   +YA E+   L  + +  + +   + INYKIRE S +K
Sbjct: 538 AGRFPLWLAPVQVAIATITSDLNDYALEVQKALIDNGVRTDFNISPDKINYKIREFSNQK 597

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           IP+I + G +E   + + IRR G+T  + +S+   I ++ +E+
Sbjct: 598 IPMIAVIGKQEQENKQVAIRRLGTTDQEVLSVEQLIAVVKEEN 640


>gi|264679166|ref|YP_003279073.1| threonyl-tRNA synthetase [Comamonas testosteroni CNB-2]
 gi|262209679|gb|ACY33777.1| threonyl-tRNA synthetase [Comamonas testosteroni CNB-2]
          Length = 687

 Score =  691 bits (1782), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 327/615 (53%), Positives = 437/615 (71%), Gaps = 19/615 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           I +T PDGS + +P   + ++VA SI   LAK A+A  INGKV D S  + + S + IIT
Sbjct: 50  INITLPDGSKREYPGPVSVAEVAASIGSGLAKAALAGKINGKVVDTSFVIEQDSPLSIIT 109

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   L VIRHS AH++A AV+ ++P+ QV IGP+IE+GFYYDF  ++PF+ ++LA IE
Sbjct: 110 AKDADGLEVIRHSTAHLLAYAVKELFPDAQVTIGPVIENGFYYDFSYKRPFTPEDLAAIE 169

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           KKM E+  +D   +++ L  ++A + F+   EAYK EI+ SIP+ E+V+LYR+G + DLC
Sbjct: 170 KKMTELANKDEQVVRRVLPRDEAVQYFKGLGEAYKAEIIASIPSNEDVSLYREGAFEDLC 229

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV STG++K F KLMKVAGAYWRGD    ML RIYGTAW T+ EL  YL+ LEE+EK
Sbjct: 230 RGPHVPSTGKLKHF-KLMKVAGAYWRGDHRNEMLQRIYGTAWATKDELKDYLFRLEEAEK 288

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQ 302
           RDHRKL RE+DLFHI E   G +FWH KGW ++Q +  YMRR  +D+ Y+E+  PQ+LD+
Sbjct: 289 RDHRKLGRELDLFHIDEHSPGTVFWHPKGWAVWQQVEQYMRRVYQDNGYQEVKAPQILDK 348

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+++GHWD YR NMF       T  + R +ALKPMNCPGH+ +F  G+KSYR+LP+R 
Sbjct: 349 GLWEKTGHWDKYRENMFT------TDSEKREYALKPMNCPGHIIIFKQGIKSYRDLPLRF 402

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG+ +RNEP+GSLHG+MRVR FTQDD H+FCT++Q+  E     +L+  +Y DFGF  
Sbjct: 403 GEFGNCHRNEPTGSLHGIMRVRAFTQDDGHIFCTEDQIQAEVTAFTSLLQKVYADFGFTN 462

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+ +LSTRPEKR+G+D  WD AEN +    + ++ S         L GEGAFYGPK EY 
Sbjct: 463 ILYRLSTRPEKRIGTDEAWDKAENALA---EGLRASG---CEFEYLPGEGAFYGPKIEYT 516

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LKDA+GR+WQCGTIQVD N+P R +A +V    E+  P+M+HRA+ GS+ERFIGI++E+ 
Sbjct: 517 LKDALGREWQCGTIQVDPNMPERLDAEFVGEDGERHRPIMLHRAILGSLERFIGILVEHH 576

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLK----SHHLSIETDFRNETINYKIREH 598
            G LP WL+P+QA V  IT +  +YAQE+A  L+    +  L + TD RNE I YKIREH
Sbjct: 577 SGALPAWLAPVQAAVLNITDAQADYAQEVAQKLQKALPNQSLRVVTDLRNEKITYKIREH 636

Query: 599 SIKKIPIIIICGDKE 613
           S++K+P I++ GDKE
Sbjct: 637 SMQKLPYILVAGDKE 651


>gi|157964288|ref|YP_001499112.1| threonyl-tRNA synthetase [Rickettsia massiliae MTU5]
 gi|157844064|gb|ABV84565.1| Threonyl-tRNA synthetase [Rickettsia massiliae MTU5]
          Length = 651

 Score =  690 bits (1781), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 327/643 (50%), Positives = 442/643 (68%), Gaps = 15/643 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           I ++FPDGSIK F  + T  +VA +IS SLAK A+   ING++ DLS  +  +  + I+T
Sbjct: 18  INISFPDGSIKQFAKNITAYEVANAISMSLAKAAIVAEINGELQDLSIVIENDCKLRILT 77

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +DP  L +IRH  AH+ AEAV+ ++PE QV IGP IE+G+YYDF +++P+++D+LA IE
Sbjct: 78  AKDPECLEIIRHDAAHLTAEAVKELFPETQVTIGPAIENGYYYDFARDKPWTTDDLAVIE 137

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            KMQE+  ++    ++    +KA E F+S  E YK EI+ SIPA E +TLYRQG + DLC
Sbjct: 138 AKMQELSQKNEKVTRELWDRDKAVEFFKSIGEHYKAEIIASIPAGEPITLYRQGNFIDLC 197

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH  STG VK F KLMKVAGAYWRGDS   ML RIYGTAW T+++L  YL  LEE+EK
Sbjct: 198 RGPHAPSTGVVKHF-KLMKVAGAYWRGDSRNEMLQRIYGTAWATKEQLDSYLLMLEEAEK 256

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQ 302
           RDHRKL RE+DLFH  E+  G++FWH KGW I+ T+  Y+R+KI K+ Y E+ TP ++D+
Sbjct: 257 RDHRKLGRELDLFHFQEEAQGMVFWHDKGWSIYNTIEQYIRKKIRKNGYTEVKTPVLVDK 316

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW  +R +MF ++  D      +T ALKPMNCP HV +F  G+KSYR+LP+R+
Sbjct: 317 SLWEVSGHWAKFRDDMFVLETDD------KTLALKPMNCPCHVQIFKQGIKSYRDLPLRM 370

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           +EFG  +RNE SG+LHGLMRVR   QDDAH+FC +EQ+ +E +    L+  +YKDFGF  
Sbjct: 371 SEFGLCHRNEASGALHGLMRVRSLVQDDAHIFCAEEQITDETVSFCKLLTEVYKDFGFTD 430

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I VK S RPE R GSD +WD AEN +K  ++      Q      +  GEGAFYGPK E++
Sbjct: 431 IKVKFSDRPEVRAGSDEVWDKAENALKEAVE------QAGFTYTLNPGEGAFYGPKLEFV 484

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L DAIGR WQCGT+Q+DF LP R +A YV +  EK  PVM+HRA+ GS+ERFIGI+IE +
Sbjct: 485 LTDAIGRQWQCGTLQMDFVLPERLDASYVAASGEKKRPVMLHRAILGSLERFIGILIEEY 544

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  PLWL+P+Q  + TITS   +YA E+   L  + +  + +   + INYKIRE S +K
Sbjct: 545 AGRFPLWLAPVQVAIATITSDLNDYALEVQKALIDNGVRTDFNISPDKINYKIREFSNQK 604

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           IP+I + G +E   + + IRR G+T  + +S+   I ++ +E+
Sbjct: 605 IPMIAVIGKQEQENKQVAIRRLGTTDQEVLSVEQLIAVVKEEN 647


>gi|163737374|ref|ZP_02144791.1| threonyl-tRNA synthetase [Phaeobacter gallaeciensis BS107]
 gi|161388900|gb|EDQ13252.1| threonyl-tRNA synthetase [Phaeobacter gallaeciensis BS107]
          Length = 648

 Score =  690 bits (1781), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/652 (50%), Positives = 445/652 (68%), Gaps = 12/652 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
           + + LTFPDG+ +++    T ++VA SIS SLAKKA++  +NG   DL  P+  + +I I
Sbjct: 2   AQVSLTFPDGNARSYDAGVTPAEVAASISTSLAKKAISATVNGAHWDLQWPIDSDAAIAI 61

Query: 62  ITPEDP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            T +D  ++  +IRH  AH+MA AVQ IWP+ +V IGP+IE+G+YYDFD+ +PF+ ++L 
Sbjct: 62  HTMKDEEQANELIRHDLAHVMARAVQEIWPDTKVTIGPVIENGWYYDFDRAEPFTPEDLG 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEKKM+EII +      +    ++A + +    E YKVE++ESIP  E + +Y  G+W 
Sbjct: 122 TIEKKMKEIINKRDEVRTEVWERDRAIQHYTDLNEPYKVELIESIPGDEPLRMYWHGDWQ 181

Query: 181 DLCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           DLCRGPH++ TGQ+    FKLM +AGAYWRGDS+R ML RIYG A+  +++L  +L+ LE
Sbjct: 182 DLCRGPHLQHTGQLPGDAFKLMSIAGAYWRGDSDRAMLQRIYGVAFTGKEKLKAHLHMLE 241

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+ KRDHRKL REM+LFH+ E+  G IFWH  GWKI+ TL  YMRR + +D Y E+NTPQ
Sbjct: 242 EAAKRDHRKLGREMNLFHMQEEAPGQIFWHPNGWKIYTTLQDYMRRMQDRDGYVEVNTPQ 301

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW+ SGHWD Y+ NMF V+  +D  ++    ALKPMNCP HV VFN GLKSYR+L
Sbjct: 302 VVDRKLWEASGHWDKYQENMFIVEVDEDHAREKAVNALKPMNCPCHVQVFNQGLKSYRDL 361

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFGS  R EPSG+LHG+MRVRGFTQDD H+FC ++Q+ +E  K    +  +Y D 
Sbjct: 362 PLRMAEFGSCARYEPSGALHGIMRVRGFTQDDGHIFCAEDQIESETAKFIAFLSKVYADL 421

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF    +KLSTRPEKR+GSD  WD  E   K + D  K +  +     +L GEGAFYGPK
Sbjct: 422 GFHDWTIKLSTRPEKRIGSDESWDLVE---KALGDACKAAGYE---YELLEGEGAFYGPK 475

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ L DAIGR+WQCGT+QVD NLP R +A ++     K  P M+HRA  GS ERFIGI+
Sbjct: 476 LEFTLTDAIGRNWQCGTLQVDPNLPERLDANFIGQDGSKHRPFMLHRATLGSFERFIGIL 535

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE   G LP WL+P Q +V +ITS A +Y  E+   L++  +  E D RNE INYK+REH
Sbjct: 536 IEEHAGKLPFWLAPRQVVVASITSDADDYVNEVVETLRAAGVRAEADIRNEKINYKVREH 595

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP-ILTKESLPPD 649
           S+ K+P+I+  G +E  ER++ +RR G   T KV  LDA+   L  E+ PPD
Sbjct: 596 SVGKVPVILAVGHREVEERTVSVRRLGEKQT-KVEALDAVTKALAVEATPPD 646


>gi|157828174|ref|YP_001494416.1| threonyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|166225494|sp|A8GR83|SYT_RICRS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|157800655|gb|ABV75908.1| threonyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila
           Smith']
          Length = 635

 Score =  690 bits (1781), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/643 (51%), Positives = 442/643 (68%), Gaps = 15/643 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I ++FPDGSIK F  + T  +VA +IS SLAK A+   ING++ DLS  +  +    I+T
Sbjct: 2   INISFPDGSIKQFAKNITAYEVANAISMSLAKAAMVAEINGELQDLSIVIDNDCKFRILT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +DP  L +IRH  AH+ AEAV+ ++PE QV IGP IE+G+YYDF +++PF++D+LA IE
Sbjct: 62  AKDPECLEIIRHDAAHLTAEAVKELFPETQVTIGPAIENGYYYDFARDKPFTNDDLAVIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            KMQE+  ++    ++    +KA E F+S  E YK EI+ SIPA E +TLYRQG + DLC
Sbjct: 122 AKMQELSQKNEQVTRELWDRDKAVEFFKSIGEHYKAEIIASIPAGEPITLYRQGNFIDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH  STG VK F KLMKVAGAYWRGDS   ML RIYGTAW T+++L  YL  LEE+EK
Sbjct: 182 RGPHSPSTGVVKHF-KLMKVAGAYWRGDSRNEMLQRIYGTAWATKEQLDSYLLMLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQ 302
           RDHRKL RE+DLFH  E+  G++FWH KGW I+ T+  Y+R+KI K+ Y E+ TP ++D+
Sbjct: 241 RDHRKLGRELDLFHFQEEAQGMVFWHDKGWSIYNTIEQYIRKKIRKNGYTEVKTPVLVDK 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW+ +R +MFA++  D      +T ALKPMNCP HV +F  G+KSYR+LP+R+
Sbjct: 301 SLWEASGHWEKFRDDMFALETDD------KTLALKPMNCPCHVQIFKQGIKSYRDLPLRM 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           +EFG  +RNE SG+LHGLMRVR   QDDAH+FC  EQ+ +E +    L+  +YKDFGF  
Sbjct: 355 SEFGLCHRNEASGALHGLMRVRSLVQDDAHIFCAAEQITDETVSFCKLLTEVYKDFGFTD 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I VK S RPE R GS+ +WD AEN +K  ++      Q      +  GEGAFYGPK E++
Sbjct: 415 IKVKFSDRPEIRAGSNEVWDKAENALKEAVE------QAGFTYTLNPGEGAFYGPKLEFV 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L DAIGR WQCGT+Q+DF LP R +A YV +  EK  PVM+HRA+ GS+ERFIGI+IE +
Sbjct: 469 LTDAIGRQWQCGTLQMDFVLPERLDASYVAASGEKKRPVMLHRAILGSLERFIGILIEEY 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  PLWL+P+Q  + TITS   +YA E+   L  + +  + +   + INYKIRE S +K
Sbjct: 529 AGRFPLWLAPVQVAIATITSDLNDYALEVQKALIDNGVRTDFNISPDKINYKIREFSNQK 588

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           IP+I + G +E   + + IRR G+T  + +S+   I ++ +E+
Sbjct: 589 IPMIAVIGKQEQENKQVAIRRLGTTDQEVLSVEQLIAVVKEEN 631


>gi|257095791|ref|YP_003169432.1| threonyl-tRNA synthetase [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
 gi|257048315|gb|ACV37503.1| threonyl-tRNA synthetase [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
          Length = 641

 Score =  690 bits (1780), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 325/644 (50%), Positives = 438/644 (68%), Gaps = 14/644 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS +N+P   + + +A  I   LA+ A+A  + G++ D +  + R+ S+ +IT  
Sbjct: 4   ITLPDGSQRNYPHPLSVAQLATDIGPGLARAALAGRVAGRLVDTAFILDRDASLSLITAR 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           DP  L ++RHSCAH++A AV+ ++P  QV IGP+IEDGF+YDF  E+PF+ D+L +IE +
Sbjct: 64  DPEGLEILRHSCAHLLAMAVKQLYPSAQVTIGPVIEDGFFYDFAFERPFTPDDLVEIEAR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           MQE+ A D P  ++ L  ++A   FE   E+YK E++ +IP  E ++LY QG++ DLCRG
Sbjct: 124 MQELAAADLPLGRRELPRDQAVAYFEQLGESYKAELIRAIPEGETLSLYAQGDFADLCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV STG+++ F KL KVAGAYWRGD+   ML RIYGT W   + L  YL  LEE+ KRD
Sbjct: 184 PHVPSTGRLQAF-KLTKVAGAYWRGDARNAMLQRIYGTCWPDAKALKAYLTRLEEAGKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHL 304
           HRKL  ++DLFH  +   G +FWH KGW +FQ LI YMR R+ + DY E+NTP V+D+ L
Sbjct: 243 HRKLGAQLDLFHFDDCAPGSVFWHPKGWALFQQLIGYMRTRQERADYVEVNTPDVMDRGL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W+ SGHW +YR  MF       T +D R FALKPMNCPG V++F   LKSYR+LP+R+AE
Sbjct: 303 WETSGHWFNYREAMFTT-----TTEDERVFALKPMNCPGAVSLFAQRLKSYRDLPLRMAE 357

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FG V+R EPSGSLHGL+RVR FTQDDAH+FCT  QM +EC     L+ +IY+DFGF+ + 
Sbjct: 358 FGKVHRYEPSGSLHGLLRVRHFTQDDAHIFCTAAQMQDECASTIALVFAIYRDFGFDDVA 417

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           VKLSTRP  R+GSD  WD  E  + G LD  +   + RIN G    EGAFYGPK E++L+
Sbjct: 418 VKLSTRPANRIGSDETWDQLEGALSGALD--RMGIECRINPG----EGAFYGPKLEFVLR 471

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           DAIGRDWQCGT+QVD NLP RF+  Y+N   E+  PVM+HRA+FGS+ERF GI+IE++ G
Sbjct: 472 DAIGRDWQCGTLQVDLNLPERFDISYINERGERERPVMLHRALFGSLERFTGILIEHYSG 531

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             PLWL+P QA+V  I+    +YA+ +   LK   +    D RNE I YKIRE+S++K+P
Sbjct: 532 LFPLWLAPQQAVVLNISEGQSDYAKSVLQALKRVGVRATVDLRNEKIGYKIREYSLQKVP 591

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
            +++ GD E +E  + +R         + L D I  L +E+ PP
Sbjct: 592 YLLVVGDMEKAEGRVALRARAGEDLGSLPLADVIARLREEARPP 635


>gi|84516459|ref|ZP_01003818.1| threonyl-tRNA synthetase [Loktanella vestfoldensis SKA53]
 gi|84509495|gb|EAQ05953.1| threonyl-tRNA synthetase [Loktanella vestfoldensis SKA53]
          Length = 648

 Score =  689 bits (1778), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 327/651 (50%), Positives = 442/651 (67%), Gaps = 10/651 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           + I LTFPDG+ + +    T  DVA  IS SL KKA++  +NG   DL  P++ +  I I
Sbjct: 2   AQISLTFPDGNSRQYDAGVTAGDVASDISPSLRKKAISATVNGAHWDLQWPIQADAQIAI 61

Query: 62  ITPEDPR-SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            T +D   +L ++RH  AHIMA AVQ IWP+ QV IGP+I+DG+YYDFD+++PF+ ++L 
Sbjct: 62  NTMKDEAPALELVRHDLAHIMARAVQEIWPDTQVTIGPVIKDGWYYDFDRKEPFTPEDLG 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEKKM+EII +      +     +A + +  + E YKVE+++SIP  E + +Y  G+W 
Sbjct: 122 LIEKKMKEIINKRDDVRTEIWDRARAVQYYTDRGEPYKVELIDSIPGNEPLRMYWHGDWQ 181

Query: 181 DLCRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           DLCRGPH+++TGQV    FKLM +AGAYWRGDS RPML RIYGTA+  +  L  +L+ LE
Sbjct: 182 DLCRGPHLQNTGQVPADAFKLMSIAGAYWRGDSTRPMLQRIYGTAFTNKDALKDHLHRLE 241

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+ KRDHRKL REM+LFH+ E+  G +FWH  GW I+  L  YMRR+ +   Y E+NTPQ
Sbjct: 242 EAAKRDHRKLGREMNLFHMQEEAPGQVFWHPDGWTIYTELQDYMRRRQRAGGYVEVNTPQ 301

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHWD Y+ NMF V+  ++  ++    ALKPMNCP HV +FN GLKSYR+L
Sbjct: 302 VVDRKLWEKSGHWDKYQENMFIVEVDEEHAREKAVNALKPMNCPCHVQIFNQGLKSYRDL 361

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFGS  R EPSG+LHG+MRVRGFTQDD H+FC ++Q+  E  +    +  +Y D 
Sbjct: 362 PLRMAEFGSCARYEPSGALHGIMRVRGFTQDDGHIFCREDQIEPETARFIAFLSRVYADL 421

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF    +KLSTRPE+R+GSDA WD  E   K + D  + +  D     +L GEGAFYGPK
Sbjct: 422 GFNDWTIKLSTRPEQRIGSDATWDMME---KALGDACRAAGYD---FELLEGEGAFYGPK 475

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ L DAIGR+WQCGT+QVD NLP R +A Y+ +  EK  PVM+HRA  GS ERFIGI+
Sbjct: 476 LEFTLTDAIGRNWQCGTLQVDANLPERLDAEYIGTDGEKHRPVMLHRATLGSFERFIGIL 535

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE   G LP WL+P Q +V TI S A +YA+++   L +  +  E D RNE INYK+REH
Sbjct: 536 IEEHAGKLPFWLAPRQVVVATIVSDADDYARDLVAALTAAGVRAEADTRNEKINYKVREH 595

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPD 649
           S+ K+P+I+  G +E  ER+   R+ G T T+ V++ + +  L + + PPD
Sbjct: 596 SVGKVPVILAVGAREVEERTATARQLGETQTRVVTMDEIVAELKQRATPPD 646


>gi|296536619|ref|ZP_06898695.1| threonine--tRNA ligase [Roseomonas cervicalis ATCC 49957]
 gi|296263053|gb|EFH09602.1| threonine--tRNA ligase [Roseomonas cervicalis ATCC 49957]
          Length = 660

 Score =  689 bits (1778), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 323/653 (49%), Positives = 444/653 (67%), Gaps = 12/653 (1%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP+   +T PD S++ F    TG+ VA +I   LAK A+A+ ++G++ DLS  +  + +I
Sbjct: 1   MPA---ITLPDQSVRVFDEAVTGTTVAAAIGPGLAKAAIAMQVDGQLRDLSHVIEGDAAI 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
             IT +DP +L +IRH  AH++AEAVQ ++P  QV IGP IE+GFYYDF + +PF+ ++ 
Sbjct: 58  RFITRKDPEALELIRHDAAHVLAEAVQELFPGTQVTIGPAIENGFYYDFARNEPFTPEDF 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IE KM+EIIAR++ F ++    E+A   FE+K E YK E++  +P    +++YRQGEW
Sbjct: 118 PKIEAKMREIIARNAAFQREVWPREQAIAFFEAKGERYKAELIRDLPVDVPISIYRQGEW 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPH+RSTG +   FKLMKVAGAYWRGD    MLSRIY TAW  Q+EL  YL+ LE
Sbjct: 178 LDLCRGPHMRSTGDIGSAFKLMKVAGAYWRGDHRNAMLSRIYATAWRDQKELDAYLHQLE 237

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+E+RDHRK+ +EM LFH+ E+  G IFWH KGW+++ TL  YMRR+ +   Y+E+ TPQ
Sbjct: 238 EAERRDHRKIGKEMGLFHLQEEAVGSIFWHPKGWRLYTTLQDYMRRRQEAGGYQEVRTPQ 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D+ LW+ SGHWD YR NMF     D++ KD R  ALKPMNCP HV +FNHGL+SYREL
Sbjct: 298 LVDRKLWEASGHWDKYRENMFIATVDDESEKD-RVLALKPMNCPCHVQIFNHGLRSYREL 356

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG+ +R EPSG+LHG+MRVR F QDDAH+FC ++Q+  E ++   L+ ++Y+D 
Sbjct: 357 PLRMAEFGACHRYEPSGALHGIMRVRSFVQDDAHIFCAEDQIAAETVEFVALLSAVYRDL 416

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF    VK S RPEKR GSD  WD +E  +K             +   +  GEGAFYGPK
Sbjct: 417 GFTDFRVKFSDRPEKRAGSDETWDRSEGALKEACRIAG------VEYELNPGEGAFYGPK 470

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E++L+DAIGRDWQCGT+QVDF LP R +A YV     +  PVM+HRA+ GS ERF+GI+
Sbjct: 471 LEFVLRDAIGRDWQCGTLQVDFVLPERLDAEYVGEDGNRHRPVMLHRAILGSFERFLGIL 530

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE   G  PLWL+P+Q  V TI   A  +A+E A   +   LS+E D RNE IN K+ +H
Sbjct: 531 IEEHAGRFPLWLAPVQVAVATIVDEAAPFAREAAAAFRKAGLSVELDLRNEKINRKVVDH 590

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
             +++P++ + G +EA +  + +RR       ++SL +A+  L  E+ PPD +
Sbjct: 591 IEQRVPVLAVIGRREAEQGKVVLRRLPGREQVEMSLAEAVATLAAEATPPDLK 643


>gi|260575744|ref|ZP_05843741.1| threonyl-tRNA synthetase [Rhodobacter sp. SW2]
 gi|259022142|gb|EEW25441.1| threonyl-tRNA synthetase [Rhodobacter sp. SW2]
          Length = 648

 Score =  689 bits (1777), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/653 (50%), Positives = 440/653 (67%), Gaps = 10/653 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           + I LTFPDG+ ++F    T ++VA SIS SLAKKA++  ++G   DL  P+  +  I I
Sbjct: 2   AQISLTFPDGNRRDFAPGVTPAEVAASISTSLAKKAISATVDGAHHDLQWPINADARIAI 61

Query: 62  ITPED-PRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            T  D  ++L +IRH  AH+MA AVQ +WP+V+V IGP+I+DG+YYDFD+ +PF+ ++L 
Sbjct: 62  HTMADEAQALELIRHDLAHVMARAVQELWPDVKVTIGPVIKDGWYYDFDRIEPFTPEDLG 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEK+M+EII        +     +A   +E K E +KVE++  IP  E + +Y  G W 
Sbjct: 122 AIEKRMKEIINLRDVVRTEVWDRPRAIAHYEQKGEPFKVELIHGIPGDEPLRMYWHGHWQ 181

Query: 181 DLCRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           DLCRGPH++ TGQ+    FKLM VAGAYWRGDSNRPML RIYG A+  + EL  +L  LE
Sbjct: 182 DLCRGPHLQHTGQLPADAFKLMSVAGAYWRGDSNRPMLQRIYGVAFKNRDELKAHLTMLE 241

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+ KRDHR+L +EMDLFH+ E+  G++FWH  GW++++TL  YMRR+ ++  Y EI TPQ
Sbjct: 242 EAAKRDHRRLGKEMDLFHLQEEAPGMVFWHPNGWQVWRTLEDYMRRRQREAGYREIRTPQ 301

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHW++YR NMF V+  ++  K+ R  ALKPMNCP HV V+N GLKSYR+L
Sbjct: 302 VVDRVLWERSGHWEAYRENMFIVEVDEEGAKEKRINALKPMNCPCHVQVYNQGLKSYRDL 361

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFG+ +R E SGS+HGLMRVRGFTQDDAH+FCT+ Q+ +EC     L+ S+Y D 
Sbjct: 362 PLRLAEFGACHRYESSGSMHGLMRVRGFTQDDAHIFCTEAQIESECAAFIELLSSVYHDL 421

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE   +KLSTRPE R+G+D  WD  E  ++  +  +  S        +  GEGAFYGPK
Sbjct: 422 GFESFDIKLSTRPEVRIGTDEDWDRVETALENAIKKVGRSYV------IDPGEGAFYGPK 475

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++ L DAIGR WQCGT QVD NLPSR  A Y+     +  P M+HRA+ GS ERF+GI+
Sbjct: 476 LDFKLTDAIGRQWQCGTFQVDPNLPSRLGAEYIGEDGARHRPFMLHRAILGSFERFLGIL 535

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IEN+ G LP WL+P Q +V  I S A  Y  E+   L+   +  E D RNE INYK+REH
Sbjct: 536 IENYAGKLPFWLAPRQVVVAGIVSDADAYVHEVVAELRKAGVRAEADVRNEKINYKVREH 595

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           S+ K+P+I+  G KE  ERS+ +RR G T T   SL   +  L  E+  PD +
Sbjct: 596 SVGKVPVILAIGMKEVEERSVSVRRLGETRTDSESLTGIVATLAHEAKAPDLR 648


>gi|294677983|ref|YP_003578598.1| threonyl-tRNA synthetase [Rhodobacter capsulatus SB 1003]
 gi|294476803|gb|ADE86191.1| threonyl-tRNA synthetase [Rhodobacter capsulatus SB 1003]
          Length = 648

 Score =  689 bits (1777), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 331/653 (50%), Positives = 443/653 (67%), Gaps = 10/653 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
           S I L FPDG+ +++P   T ++VA SIS SLAK A++  ++G   DL  P+ R+  I I
Sbjct: 2   SQISLHFPDGAKRDYPAGVTAAEVAASISPSLAKAAISAQLDGAHWDLQWPIKRDARISI 61

Query: 62  ITPEDP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            T +DP  +L +IRH  AHIMA AVQ IWP+V+V IGP+ + G++YDFD+ +PF+ ++L 
Sbjct: 62  NTMKDPVPALELIRHDLAHIMARAVQEIWPDVKVTIGPVRDAGWFYDFDRAEPFTPEDLG 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           QIE +M++II    P   +  S E A   +E   E YKVE++  IP  E++ +Y  G W 
Sbjct: 122 QIEARMKQIINAREPVRTEVWSREDAIAHYEKSNEPYKVELVNRIPEGEDLRMYWHGNWQ 181

Query: 181 DLCRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           DLCRGPH++ TGQV    FKL  VAGAYW GDS RPML RIYG A+ T+ +L  ++  LE
Sbjct: 182 DLCRGPHLQHTGQVPADAFKLTHVAGAYWLGDSTRPMLQRIYGIAFRTRDDLKAHMTMLE 241

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+ KRDHRKL REMDLFH+ E+  G +FWH  GW I+ TL  YMRR+ + D Y E+NTPQ
Sbjct: 242 EAAKRDHRKLGREMDLFHMQEEAPGQVFWHPNGWTIYTTLQDYMRRRQRADGYVEVNTPQ 301

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+++ LW+ SGHW++YR NMF V+  ++  ++    ALKPMNCP HV +FN GLKSYR+L
Sbjct: 302 VVNRKLWEASGHWENYRENMFIVEVDEEGAREKVINALKPMNCPCHVQIFNVGLKSYRDL 361

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFGS  R EPSG+LHG+MRVRGFTQDDAH+FC ++Q+  E  K    + ++Y D 
Sbjct: 362 PLRMAEFGSCARYEPSGALHGIMRVRGFTQDDAHIFCMEDQIEAETKKFIEFLSAVYADL 421

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+K  +KLSTRPEKR+G++  WD AE  +   +    +  +      +  GEGAFYGPK
Sbjct: 422 GFDKWRIKLSTRPEKRIGTEESWDHAEAALANAVTAAGHEYE------IFEGEGAFYGPK 475

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E++L DAIGRDWQCGT+QVD NLP R +A Y+     K  PVM+HRA  GS ERFIGI+
Sbjct: 476 LEFVLTDAIGRDWQCGTLQVDPNLPERLDANYIGPDGAKHRPVMLHRACLGSFERFIGIL 535

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+  G LPLWL+P Q +V +ITS A +Y +E+A  L +  +  E D RNE INYK+REH
Sbjct: 536 IESHAGKLPLWLAPRQVVVASITSEADDYVEEVAATLIAAGIRAECDTRNEKINYKVREH 595

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           S+ K+P I   G KE   R++ +RR G T T+ V+L   +  L  E+ PPD +
Sbjct: 596 SLGKVPYIFAIGAKEVETRTVSVRRLGDTRTETVALDAIVAALKAEATPPDLR 648


>gi|50952758|gb|AAT90291.1| putative threonyl-tRNA synthetase [uncultured proteobacterium
           eBACred25D05]
          Length = 650

 Score =  689 bits (1777), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/652 (50%), Positives = 448/652 (68%), Gaps = 10/652 (1%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I +TFPDG+ + +    T   VA++IS SL+KKA++  ++G   DL  P+ ++  + I T
Sbjct: 4   IIITFPDGNKREYDAGITAEKVAQTISISLSKKAISADLDGAHWDLQWPIYKDAELSINT 63

Query: 64  PEDP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
            ++  R++ ++RH  AHIMA AVQ IWP+V+V IGP+I  G+YYDFD E+PF+ ++L +I
Sbjct: 64  LKNKERAIELVRHDLAHIMARAVQEIWPKVKVTIGPVINHGWYYDFDHEEPFTPEDLGKI 123

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E+KM+EII        +    EKA E + +KKE YK+E++++IP  +N+ +Y  G+W DL
Sbjct: 124 ERKMREIINLRDVVRTELWDREKAIEYYTAKKEPYKIELIDAIPENDNIRMYWHGDWQDL 183

Query: 183 CRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           CRGPH ++T QV    FKLM VAGAYWRGDSNR ML RIYG A+  ++ L ++L  LEE+
Sbjct: 184 CRGPHFQNTAQVPADAFKLMSVAGAYWRGDSNRQMLQRIYGVAFLNKENLREHLNMLEEA 243

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVL 300
            KRDHRKL +EMDLFH+ E+  G IFWH  GWKI+  L  YMRR+ +   Y E+NTPQV+
Sbjct: 244 AKRDHRKLGKEMDLFHMQEEAPGQIFWHPNGWKIYTLLQDYMRRQQEVGGYVEVNTPQVV 303

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D+ LW++SGHWD Y+ +MF V+  ++  ++    ALKPMNCP HV V+N G+KSYR+LP+
Sbjct: 304 DRKLWEESGHWDKYQEHMFIVEVDEEHAREKSINALKPMNCPCHVQVYNQGIKSYRDLPL 363

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AEFGS  R EPSG+LHG+MRVRGFTQDDAH+FC ++Q+ +E  K  N +  +YKD GF
Sbjct: 364 RMAEFGSCNRYEPSGALHGIMRVRGFTQDDAHIFCQEDQIESETKKFINFLSGVYKDLGF 423

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
            K  VK S RP+ R GSD +WD AE  +K    T        +N G    EGAFYGPK E
Sbjct: 424 PKFAVKFSDRPKNRAGSDDVWDKAEGALKSA--TTSAGFDFELNPG----EGAFYGPKLE 477

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           ++L DAIGRDWQCGT+QVDF LP R +A ++    +K  PVM+HRAV GS ERFIGI+IE
Sbjct: 478 FVLTDAIGRDWQCGTLQVDFVLPDRLDANFIGEDGQKHRPVMLHRAVLGSFERFIGILIE 537

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           NF G LP WL+P Q +V +I + A EY  EI + LK   +  E+D RNE I+YK+REHS+
Sbjct: 538 NFAGRLPFWLAPRQVVVASIVTDANEYCTEIVDALKLVGIRAESDLRNEKISYKVREHSV 597

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
            K+P I+  G++E  +R+I +R  G   T+ ++    I  L KE +PPD ++
Sbjct: 598 AKVPTILAIGNREVEDRAITVRTLGEKQTKTINFDQVILELQKEGIPPDMRQ 649


>gi|163740958|ref|ZP_02148351.1| threonyl-tRNA synthetase [Phaeobacter gallaeciensis 2.10]
 gi|161385949|gb|EDQ10325.1| threonyl-tRNA synthetase [Phaeobacter gallaeciensis 2.10]
          Length = 648

 Score =  689 bits (1777), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/651 (50%), Positives = 442/651 (67%), Gaps = 10/651 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
           + + LTFPDG+ +++    T ++VA SIS SLAKKA++  +NG   DL  P+  + +I I
Sbjct: 2   AQVSLTFPDGNARSYDAGVTPAEVAASISTSLAKKAISATVNGAHWDLQWPIDSDAAIAI 61

Query: 62  ITPEDP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            T +D  ++  +IRH  AH+MA AVQ IWP+ +V IGP+IE+G+YYDFD+ +PF+ ++L 
Sbjct: 62  HTMKDEEQANELIRHDLAHVMARAVQDIWPDTKVTIGPVIENGWYYDFDRAEPFTPEDLG 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEKKM+EII +      +    ++A + +    E YKVE++ESIP  E + +Y  G+W 
Sbjct: 122 TIEKKMKEIINKRDAVRTEVWDRDRAIQHYTDLNEPYKVELIESIPGDEPLRMYWHGDWQ 181

Query: 181 DLCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           DLCRGPH++ TGQ+    FKLM +AGAYWRGDS+R ML RIYG A+  +++L  +L+ LE
Sbjct: 182 DLCRGPHLQHTGQLPGDAFKLMSIAGAYWRGDSDRAMLQRIYGVAFTGKEKLKAHLHMLE 241

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+ KRDHRKL REM+LFH+ E+  G IFWH  GWKI+ TL  YMRR + +D Y E+NTPQ
Sbjct: 242 EAAKRDHRKLGREMNLFHMQEEAPGQIFWHPNGWKIYTTLQDYMRRMQDRDGYVEVNTPQ 301

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW+ SGHWD Y+ NMF V+  +D  ++    ALKPMNCP HV VFN GLKSYR+L
Sbjct: 302 VVDRKLWEASGHWDKYQENMFIVEVDEDHAREKAVNALKPMNCPCHVQVFNQGLKSYRDL 361

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFGS  R EPSG+LHG+MRVRGFTQDD H+FC ++Q+ +E  K    +  +Y D 
Sbjct: 362 PLRMAEFGSCARYEPSGALHGIMRVRGFTQDDGHIFCAEDQIESETAKFIAFLSKVYADL 421

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF    +KLSTRPEKR+GSD  WD  E   K + D  K +  +     +L GEGAFYGPK
Sbjct: 422 GFHDWTIKLSTRPEKRIGSDESWDLVE---KALGDACKAAGYE---YELLEGEGAFYGPK 475

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ L DAIGR+WQCGT+QVD NLP R +A ++     K  P M+HRA  GS ERFIGI+
Sbjct: 476 LEFTLTDAIGRNWQCGTLQVDPNLPERLDANFIGQDGSKHRPFMLHRATLGSFERFIGIL 535

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE   G LP WL+P Q +V +ITS A +Y  E+   L++  +  E D RNE INYK+REH
Sbjct: 536 IEEHAGKLPFWLAPRQVVVASITSDADDYVNEVVETLRAAGVRAEADIRNEKINYKVREH 595

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPD 649
           S+ K+P+I+  G +E  ER++ +RR G   T+  +L      L  E+ PPD
Sbjct: 596 SVGKVPVILAVGHREVEERTVSVRRLGEKQTKVEALEAVTKALAVEATPPD 646


>gi|310815279|ref|YP_003963243.1| threonyl-tRNA synthetase [Ketogulonicigenium vulgare Y25]
 gi|308754014|gb|ADO41943.1| threonyl-tRNA synthetase [Ketogulonicigenium vulgare Y25]
          Length = 648

 Score =  688 bits (1776), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 331/652 (50%), Positives = 447/652 (68%), Gaps = 12/652 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           S I LTFPDG+ + +P   T + VAESIS+SLAK A++  ++G+  DL  P+  + SI +
Sbjct: 2   SLISLTFPDGNKREYPAGITAAAVAESISKSLAKAAISAQLDGQHWDLQWPITADASIAL 61

Query: 62  ITPEDPR-SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            T +D   +L +IRH  AHIMA AVQ IWP+V+V IGP+ + G++YDFD+ +PF+ ++L 
Sbjct: 62  NTMKDEAPALELIRHDLAHIMARAVQEIWPDVKVTIGPVRDYGWFYDFDRAEPFTPEDLG 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IE +M++II    P   +     +A   +E + E YK+E++  IP  E + +Y  G+W 
Sbjct: 122 AIEAQMKKIINAREPVRTEVWERARALAYYEDRGEPYKIELVNRIPGDEPLRMYWHGDWQ 181

Query: 181 DLCRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           DLCRGPH++STGQV    FKL  VAGAYW GDS+RPML RIYG A+  +++L  ++  LE
Sbjct: 182 DLCRGPHLQSTGQVPADGFKLTHVAGAYWLGDSSRPMLQRIYGVAFRNREDLKAHMTMLE 241

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+ KRDHR+L REMDLFH+ E+  G +FWH  GW ++  L  YMRR+  KD Y E+NTPQ
Sbjct: 242 EAAKRDHRRLGREMDLFHMQEEAPGQVFWHPNGWTVYTALQDYMRRRQRKDGYVEVNTPQ 301

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+++ LW++SGHW++YR NMF V+  ++  K+    ALKPMNCP HV +FNHGLKSYREL
Sbjct: 302 VVNRVLWEKSGHWENYRDNMFIVEVDEEGAKEKVVNALKPMNCPCHVQIFNHGLKSYREL 361

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFGS  R EPSG+LHG+MRVRGFTQDD H+FCT++Q+ +E  K    + S+Y D 
Sbjct: 362 PLRMAEFGSCARYEPSGALHGIMRVRGFTQDDGHIFCTEDQIESETKKFIEFLASVYADL 421

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE   VKLSTRPEKR+G++  WD AE  +    +  + +  D     +  GEGAFYGPK
Sbjct: 422 GFESWRVKLSTRPEKRIGTEESWDHAEQSLG---NACRKAGYD---YELQEGEGAFYGPK 475

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E++L DAIGRDWQCGT+QVD NLP R +A Y+     K  P+M+HRA  GS ERF+GI+
Sbjct: 476 LEFVLTDAIGRDWQCGTLQVDPNLPERLDANYIGQDGAKHRPIMLHRACLGSFERFVGIL 535

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IENF G LP WL+P Q +V +I S A +Y  E+   L +  +  E D RNE INYK+REH
Sbjct: 536 IENFAGKLPFWLAPRQVVVASIVSDADDYVHEVVAALSAAGVRAEADTRNEKINYKVREH 595

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES-LPPD 649
           S+ K+P+I+  G +E  ER++ +RR G   T  +S LDAI   T+ S LPPD
Sbjct: 596 SLGKVPLILAIGAREVEERTVTVRRLGENQTATMS-LDAILAETRASALPPD 646


>gi|239947855|ref|ZP_04699608.1| threonyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes
           scapularis]
 gi|241116864|ref|XP_002401645.1| threonyl-tRNA synthetase, putative [Ixodes scapularis]
 gi|215493189|gb|EEC02830.1| threonyl-tRNA synthetase, putative [Ixodes scapularis]
 gi|239922131|gb|EER22155.1| threonyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes
           scapularis]
          Length = 635

 Score =  688 bits (1776), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/643 (51%), Positives = 445/643 (69%), Gaps = 15/643 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           I ++FPDGSIK F  + T  +VA +IS SLAK+A+   ING++ DLS  +  +  + I+T
Sbjct: 2   INISFPDGSIKQFEKNITAYEVANAISMSLAKRAMVAEINGELKDLSTVIENDCKLRILT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +DP  L +IRH  AH+ AEAV+ ++PE QV IGP IE+G+YYDF +++PF++D+LA IE
Sbjct: 62  VKDPECLEIIRHDAAHLTAEAVKELFPETQVTIGPAIENGYYYDFARDKPFTTDDLAVIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            KMQE+  ++    ++    +KA E F+S  E YK EI+ SIPA E +TLYRQG++ DLC
Sbjct: 122 AKMQELSKKNEKVTRELWDRDKAVEFFKSIGEHYKAEIIASIPAGEPITLYRQGDFIDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH  STG VK F KLMKVAGAYWRGDS   ML RIYGTAW T+++L  YL+ LEE+EK
Sbjct: 182 LGPHAPSTGFVKHF-KLMKVAGAYWRGDSCNEMLQRIYGTAWATKEQLDNYLFMLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQ 302
           RDHRKL RE+DLFH  E+  G++FWH KGW I+  +  Y+R+KI K+ Y E+ TP ++D+
Sbjct: 241 RDHRKLGRELDLFHFQEEAQGMVFWHDKGWSIYNIIEQYIRKKIRKNGYIEVKTPVLVDK 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW  +R +MFA++  D      +T ALKPMNCP HV +F  G+KSYR+LP+R+
Sbjct: 301 SLWEASGHWKKFRDDMFALETDD------KTLALKPMNCPCHVQIFKQGIKSYRDLPLRM 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           +EFG  +RNE SG+LHGLMRVR   QDDAH+FC +EQ+ +E +    L+  +YKDFGF  
Sbjct: 355 SEFGLCHRNEASGALHGLMRVRSLVQDDAHIFCAEEQITDETVSFCKLLTEVYKDFGFND 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I VK S RPE R GSD +WD AEN +K  ++  K      +N G    EGAFYGPK E++
Sbjct: 415 IKVKFSDRPEIRAGSDEVWDKAENALKEAVE--KAGFTYTLNPG----EGAFYGPKLEFV 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L DAIGR WQCGT+Q+DF LP R +A Y+ +  EK  PVM+HRA+ GS+ERFIGI+IE +
Sbjct: 469 LTDAIGRQWQCGTLQMDFVLPERLDASYIAASGEKKRPVMLHRAILGSLERFIGILIEEY 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  PLW++PIQ  V TITS   +YA E+   L  + +  + +   + INYKIRE S +K
Sbjct: 529 AGRFPLWITPIQVAVATITSDLNDYALEVQKALIDNGVRTDINISPDKINYKIREFSNQK 588

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           IP+I + G +E   + + IRR G+T  + +S+   I ++ +E+
Sbjct: 589 IPMIAVIGKQEKENKQVTIRRLGTTEQEVLSIEQLIALVKEEN 631


>gi|319763197|ref|YP_004127134.1| threonyl-tRNA synthetase [Alicycliphilus denitrificans BC]
 gi|330825391|ref|YP_004388694.1| threonyl-tRNA synthetase [Alicycliphilus denitrificans K601]
 gi|317117758|gb|ADV00247.1| threonyl-tRNA synthetase [Alicycliphilus denitrificans BC]
 gi|329310763|gb|AEB85178.1| threonyl-tRNA synthetase [Alicycliphilus denitrificans K601]
          Length = 639

 Score =  688 bits (1775), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 324/615 (52%), Positives = 436/615 (70%), Gaps = 19/615 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           +++T PDGS + FP   T +DVA SI   LAK A+A  I  KV D S  + + S + I+T
Sbjct: 2   LQITLPDGSRREFPGPVTVADVAASIGSGLAKAALAGKIGDKVVDTSYRITQDSPLSIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +DP  L VIRHS AH++A AV+ ++P+ QV IGP+IE+GFYYDF  ++PF+ ++L  IE
Sbjct: 62  AKDPEGLEVIRHSTAHLLAYAVKELFPDAQVTIGPVIENGFYYDFAYKRPFTPEDLVAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M E+ A+D P +++ L  ++A   F+   E YK EI+ SIP+ E+V+LYR+G + DLC
Sbjct: 122 KRMMELAAKDEPVVRRVLPRDEAVAYFKGLGEHYKAEIIASIPSNEDVSLYREGGFEDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV STG++K FFKLMKVAGAYWRGD    ML R+YGTAW T+ EL QYL+ LEE+EK
Sbjct: 182 RGPHVPSTGKLK-FFKLMKVAGAYWRGDHRNEMLQRVYGTAWATKDELNQYLHMLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQ 302
           RDHR+L RE+DLFHI E   G +FWH KGW ++Q +  YMRR  +D+ Y+E+  PQ+LD+
Sbjct: 241 RDHRRLGRELDLFHIDEHSPGTVFWHPKGWTLWQEVEQYMRRVYRDNGYQEVKAPQILDK 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+++GHWD YR NMF       T  + R +ALKPMNCPGH+ +F  G+KSYR+LP+R 
Sbjct: 301 SLWEKTGHWDKYRENMFV------TESEKRDYALKPMNCPGHILIFKQGIKSYRDLPLRY 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG  +RNEP+G LHG+MRVRGFTQDD H+FCT++Q+ +E L    L+  +Y+DFGF  
Sbjct: 355 GEFGQCHRNEPTGGLHGIMRVRGFTQDDGHIFCTEDQIQHEVLAFTRLLQRVYQDFGFTD 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+ K++TRP+ R+GSD +WD AE     +++++K S  D     +  GEGAFYGPK EY 
Sbjct: 415 IVYKVATRPDARIGSDEIWDKAE---AALIESLKASGCD---FEISPGEGAFYGPKIEYT 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LKDAIGR WQCGTIQVDF++P R +A YV     +  PVM+HRA+ GS+ERFIGI+IE  
Sbjct: 469 LKDAIGRHWQCGTIQVDFSMPERLDAEYVGEDGGRHRPVMLHRAIVGSLERFIGILIEQH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKS----HHLSIETDFRNETINYKIREH 598
            G LP+WL+P+Q  V  IT +  +Y +EIA  L+       L +  D RNE I YKIREH
Sbjct: 529 AGALPVWLAPVQVAVLNITDAQSDYCREIAAKLQKALPHQDLRVVQDLRNEKITYKIREH 588

Query: 599 SIKKIPIIIICGDKE 613
           +++K+P I++ GDKE
Sbjct: 589 ALQKLPYILVAGDKE 603


>gi|255262353|ref|ZP_05341695.1| threonyl-tRNA synthetase [Thalassiobium sp. R2A62]
 gi|255104688|gb|EET47362.1| threonyl-tRNA synthetase [Thalassiobium sp. R2A62]
          Length = 649

 Score =  687 bits (1774), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/653 (50%), Positives = 442/653 (67%), Gaps = 10/653 (1%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           M + I LTFPD S++ +    T +DVA  IS SL KKA++  ++G   D+  P+  + +I
Sbjct: 1   MMAQISLTFPDNSVRQYDAGVTPADVAADISNSLRKKAISAHVDGAHWDMQWPITTDANI 60

Query: 60  EIITPEDPR-SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
            I T +D   +  ++RH  AHIMA AVQ IWP+VQV IGP+I+DG+YYDFD+ +PF+ ++
Sbjct: 61  AINTMKDEGPANELVRHDLAHIMARAVQEIWPDVQVTIGPVIKDGWYYDFDRAEPFTPED 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L  IEKKM+EII        +     +A + +E   E YKVE++++IP  E + +Y  G+
Sbjct: 121 LGLIEKKMKEIINLRDEVRTEVWDRARAVKHYEDAGEPYKVELIDAIPGDEPLRMYWHGD 180

Query: 179 WFDLCRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           W DLCRGPH+++TGQV    FKLM VAGAYWRGDS+R ML RIYG A+  ++ L ++L+ 
Sbjct: 181 WQDLCRGPHLQNTGQVPADAFKLMSVAGAYWRGDSDRAMLQRIYGVAFTNKEGLKKHLHM 240

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINT 296
           LEE+ KRDHRKL REMDLFH+ E+  G +FWH  GW ++  L  YMRRK +   Y E+NT
Sbjct: 241 LEEAAKRDHRKLGREMDLFHMQEEAPGQVFWHPNGWTVYTELQDYMRRKQRAGGYVEVNT 300

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           PQV+D+ LW+ SGHW+ Y+ NMF V+  ++  ++    ALKPMNCP HV +FN GLKSYR
Sbjct: 301 PQVVDRKLWEASGHWEKYQENMFIVEVDEEHAREKAVNALKPMNCPCHVQIFNQGLKSYR 360

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +LP+R+AEFGS  R EPSG+LHG+MRVRGFTQDD H+FC ++Q+  E       + +IYK
Sbjct: 361 DLPLRMAEFGSCNRYEPSGALHGIMRVRGFTQDDGHIFCREDQVQEETAVYIEFLSTIYK 420

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           D GFEK  VK S RP+ R GSD +WD AE   + +L   +N+    I   +  GEGAFYG
Sbjct: 421 DLGFEKFRVKYSDRPDTRAGSDEVWDKAE---QALLTATRNAG---IEPEMNPGEGAFYG 474

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK E++L DAIGRDWQCGT QVDF LP R +A Y+ +   K  PVM+HRA  GS ERFIG
Sbjct: 475 PKLEFVLTDAIGRDWQCGTHQVDFVLPERLDATYIGTDGGKHRPVMLHRATLGSFERFIG 534

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           I+IE   G LP WL+P Q +VTTI S A ++A EI   L+S  +  E D RNE INYK+R
Sbjct: 535 ILIEEHAGKLPFWLAPRQVVVTTIVSDADDFAAEIVETLRSKGVRAEADTRNEKINYKVR 594

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPD 649
           EHS+ K+P+I+  G +E  ER++ +RR G   ++ ++  +  P L  E+ PPD
Sbjct: 595 EHSLAKVPVILAIGQREVDERTVSVRRLGEKQSKVIAFDEVAPQLAIEATPPD 647


>gi|86137404|ref|ZP_01055981.1| threonyl-tRNA synthetase [Roseobacter sp. MED193]
 gi|85825739|gb|EAQ45937.1| threonyl-tRNA synthetase [Roseobacter sp. MED193]
          Length = 648

 Score =  687 bits (1774), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 327/651 (50%), Positives = 443/651 (68%), Gaps = 10/651 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
           + I LTFPDG+ ++F    T ++VA SIS SL KKA++  +NG   DL  P+  + SI +
Sbjct: 2   AKISLTFPDGNARDFDAGITPAEVASSISTSLGKKAISATVNGAHWDLQWPIDADASIAL 61

Query: 62  ITPED-PRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            T +D  ++  +IRH  AH+MA AVQ IWP+ +V IGP+IE+G+YYDFD+ +PF+ ++L 
Sbjct: 62  HTMKDEAQANELIRHDLAHVMARAVQEIWPDTKVTIGPVIENGWYYDFDRAEPFTPEDLG 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEKKM+EII +  P   +    ++A + + +  E YKVE++E+IP  E + +Y  G+W 
Sbjct: 122 VIEKKMKEIINKRDPVRTEVWDRQRAVDFYTANDEPYKVELIEAIPGDEPLRMYWHGDWQ 181

Query: 181 DLCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           DLCRGPH++ TGQ+    FKLM +AGAYWRGDS+R ML RIYG A+  +++L  +L+ LE
Sbjct: 182 DLCRGPHLQHTGQLPGDAFKLMSIAGAYWRGDSDRAMLQRIYGVAFTGKEKLKAHLHMLE 241

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+ KRDHRKL REM+L+H+ E+  G +FWH  GWKI+ TL  YMRR + +D Y E+NTPQ
Sbjct: 242 EAAKRDHRKLGREMNLYHMQEEAPGQVFWHPNGWKIYTTLQDYMRRMQERDGYVEVNTPQ 301

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW+ SGHWD Y+ NMF V+  ++  ++    ALKPMNCP HV VFN GLKSYR+L
Sbjct: 302 VVDRKLWEASGHWDKYQENMFIVEVDEEHAREKAVNALKPMNCPCHVQVFNQGLKSYRDL 361

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFGS  R EPSG+LHG+MRVRGFTQDD H+FC ++Q+ +E  K    +  +Y D 
Sbjct: 362 PLRMAEFGSCARYEPSGALHGIMRVRGFTQDDGHIFCAEDQIESETAKFIAFLSKVYADL 421

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF    +KLSTRPEKR+GSD  WD  E   K + D  K +  +     +L GEGAFYGPK
Sbjct: 422 GFHNWTIKLSTRPEKRIGSDESWDLVE---KALGDACKAAGYE---YELLEGEGAFYGPK 475

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ L DAIGR+WQCGT+QVD NLP R  A ++ +   K  P M+HRA  GS ERFIGI+
Sbjct: 476 LEFTLTDAIGRNWQCGTLQVDPNLPERLEANFIGADGNKHRPFMLHRATLGSFERFIGIL 535

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE   G LP WL+P Q +V +ITS A +Y  E+   L++  +  E D RNE INYK+REH
Sbjct: 536 IEEHAGKLPFWLAPRQVVVASITSDADDYVHEVVTELQAAGVRAEADIRNEKINYKVREH 595

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPD 649
           S+ K+P+I+  G +E  ER++ IRR G   T+  SL +    L  E+  PD
Sbjct: 596 SLGKVPVILAIGHREVEERTVSIRRLGEKQTRVDSLENVTKALGVEATAPD 646


>gi|84687895|ref|ZP_01015762.1| threonyl-tRNA synthetase [Maritimibacter alkaliphilus HTCC2654]
 gi|84664089|gb|EAQ10586.1| threonyl-tRNA synthetase [Rhodobacterales bacterium HTCC2654]
          Length = 649

 Score =  687 bits (1773), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 331/653 (50%), Positives = 445/653 (68%), Gaps = 13/653 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEI 61
           S I LTFPDG+ + +    T + +A  IS SLAKKA++  +NG   DL  P+ E S I I
Sbjct: 2   SHISLTFPDGNTRVYDAGITPAAIAADISNSLAKKAISATVNGAHYDLQWPITEDSEIAI 61

Query: 62  IT-PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            T  +D ++L +IRH  AHIMA AVQ++WP+ +V IGP+IE G+YYDFD+++PF+ ++L 
Sbjct: 62  HTMKDDAQALELIRHDAAHIMARAVQALWPDTKVTIGPVIEHGWYYDFDRDEPFTPEDLG 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-ENVTLYRQGEW 179
            IE KM+EII        +  S   A   +E   E YKVE++ +IP   + + +Y  G+W
Sbjct: 122 AIEAKMKEIINARDEVRTEVWSRADAIAHYEKTGEPYKVELVNAIPDDGQPIRMYWHGDW 181

Query: 180 FDLCRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
            DLCRGPH+++TGQV    FKLMKVAGAYWRGDS RPML RIYG A+  + +L ++L FL
Sbjct: 182 QDLCRGPHLQNTGQVPADAFKLMKVAGAYWRGDSTRPMLQRIYGVAFKNRDDLKKHLTFL 241

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
           EE+EKRDHR+L REMDLFH+ E+  G +FWH  GW I+  L  YMRR+  +  Y E+NTP
Sbjct: 242 EEAEKRDHRRLGREMDLFHMQEEAPGQVFWHPNGWTIYTVLQDYMRRQQQRGGYVEVNTP 301

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           QV+D+ LW+ SGHW+ Y+ NMF V+  ++  ++    ALKPMNCP HV +FN GLKSYR+
Sbjct: 302 QVVDRKLWEASGHWEKYQENMFIVEVDEEHAREKAVNALKPMNCPCHVQIFNVGLKSYRD 361

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS  R EPSG+LHG+MRVRGFTQDDAH+FCT++Q+ +E  +  + +  IYKD
Sbjct: 362 LPLRMAEFGSCNRYEPSGALHGIMRVRGFTQDDAHIFCTEDQIESETERFISFLAGIYKD 421

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD-RINTGVLLGEGAFYG 476
            GF    +K S RP+ R GSD +WD AE   K +LD     + D  +N     GEGAFYG
Sbjct: 422 LGFPTYKIKFSDRPDTRAGSDEIWDKAE---KALLDATHKVTNDVELNP----GEGAFYG 474

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK E++L DAIGRDWQCGT+QVDF LP R +A Y+     K  PVM+HRA  GS ERFIG
Sbjct: 475 PKLEFVLTDAIGRDWQCGTLQVDFVLPERLDANYIGEDGAKHRPVMLHRATLGSFERFIG 534

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           I+IE   G LP W++P Q +V +I S A +Y +E+ + L++  +  E D RNE INYK+R
Sbjct: 535 ILIEEHAGKLPFWIAPRQVVVASIVSDADDYVREVVDALRAKGVRAEADTRNEKINYKVR 594

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPD 649
           EHS  K+P+I+  G KE  +R++ +RR G   T+ V+L + +  L+ E+ PPD
Sbjct: 595 EHSAGKVPVILAIGMKEVEDRTVTLRRLGEKQTRVVALDEVVQELSTEATPPD 647


>gi|187477891|ref|YP_785915.1| threonyl-tRNA synthetase [Bordetella avium 197N]
 gi|123738749|sp|Q2L2M5|SYT_BORA1 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|115422477|emb|CAJ49002.1| threonyl-tRNA synthetase [Bordetella avium 197N]
          Length = 650

 Score =  687 bits (1772), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 318/647 (49%), Positives = 450/647 (69%), Gaps = 20/647 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVA--VAING---KVCDLSDPV-REGS 58
           +++T PDGS + +P   T ++VA+SI   LAK A+A  V +N    K+ D S  + ++  
Sbjct: 2   VQITLPDGSQRQYPGPVTVAEVAQSIGTGLAKAALAGRVTVNDAEPKLVDTSFRIDQDAK 61

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           + I+T +D   L +IRHS AH++A AV+S++P+ QV IGP+I++GFYYDF  ++PF+ ++
Sbjct: 62  LAIVTAKDADGLDLIRHSTAHLLAYAVKSLYPDAQVTIGPVIDNGFYYDFSYKRPFTPED 121

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L  IEKKM E+  +D    ++  + + A   F+S  E YK EI+ SIP+ E ++LYR+GE
Sbjct: 122 LQAIEKKMAELARKDEVVTREEWTRDDAVAYFKSIGENYKAEIIASIPSNEKISLYREGE 181

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + DLCRGPHV STG++K  FKLMK+AGAYWRGDSN  ML RIYGTAW T+ E   YL+ L
Sbjct: 182 FIDLCRGPHVPSTGKLK-VFKLMKLAGAYWRGDSNNEMLQRIYGTAWATKDEQDAYLHML 240

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTP 297
           EE+E+RDHRK+ R++DLFH  ++G G+IFWH KGW ++Q +  YMR   +D+ Y+E+  P
Sbjct: 241 EEAERRDHRKIGRDLDLFHFQDEGPGLIFWHPKGWTLWQQVEQYMRAVYRDNGYQEVKAP 300

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           Q+LD  LW+++GHWD+YR NMF  +  +      R + LKPMNCPGHV +FN GL SYRE
Sbjct: 301 QILDLSLWKKTGHWDNYRENMFTTESEN------RVYGLKPMNCPGHVQIFNAGLHSYRE 354

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R  EFG  +RNEPSGSLHG+MRVRGFTQDD H+FCT++Q+ +EC     L+  +Y+D
Sbjct: 355 LPLRYGEFGQCHRNEPSGSLHGMMRVRGFTQDDGHIFCTEDQLQDECADFTALLQKVYRD 414

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF +++ K++TRPEKR+GSD +WD AE  +   +++++ +        +  GEGAFYGP
Sbjct: 415 FGFTEVLYKVATRPEKRIGSDEIWDKAETAL---MESLRRTG---CEFEISPGEGAFYGP 468

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K EY LKDAIGR WQCGTIQVDF++P R  A YV+ + ++  PVM+HRA+ GS+ERFIG+
Sbjct: 469 KIEYTLKDAIGRHWQCGTIQVDFSMPVRLGAEYVDQNDQRRAPVMLHRAILGSLERFIGM 528

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IEN  G +P WL+P+QA+V  I+  + EYA +I   LK     ++ D R E I  KIRE
Sbjct: 529 LIENHAGAMPPWLAPVQAVVCCISEPSAEYAAKITQSLKKQGFRVQADLRGEKITRKIRE 588

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           HS++K+P I++ GDKEA   ++ +R  G      +   D +  L ++
Sbjct: 589 HSLQKVPYILVVGDKEAQNGTVAVRGLGGLDLGAIPFDDFVARLNED 635


>gi|83942907|ref|ZP_00955367.1| threonyl-tRNA synthetase [Sulfitobacter sp. EE-36]
 gi|83845915|gb|EAP83792.1| threonyl-tRNA synthetase [Sulfitobacter sp. EE-36]
          Length = 649

 Score =  687 bits (1772), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 326/653 (49%), Positives = 436/653 (66%), Gaps = 10/653 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           + I LT PDG+ + +    T  DVA  IS+SL KKA++  +NG   DL+ P+  + SI I
Sbjct: 2   AQITLTLPDGNARQYDAGITAGDVANDISKSLGKKAISATVNGAHYDLAWPINADASIAI 61

Query: 62  ITPED-PRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            T  D  ++  ++RH  AHIMA AVQ +WP+ +V IGP+I+DG+YYDFD+++ F+ ++L 
Sbjct: 62  HTMADEAQANELVRHDLAHIMARAVQELWPDTKVTIGPVIKDGWYYDFDRKESFTPEDLG 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEKKM+EII +  P   +    E+A + +E   E YKVE++ SIP  E + +Y  G+W 
Sbjct: 122 LIEKKMKEIINKRDPVRTEVWDRERAIKHYEDNGEPYKVELINSIPGDEPLRMYWHGDWQ 181

Query: 181 DLCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           DLCRGPH++ TGQV    FKLM +AGAYWRGDS+R ML RIYG A+  +++L  +L  LE
Sbjct: 182 DLCRGPHLQHTGQVPGDAFKLMSIAGAYWRGDSDRAMLQRIYGVAFTGKEKLKAHLNMLE 241

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+ KRDHRKL REMDL+H+ E+  G +FWH  GW I+  L  YMRRK +   Y E+NTPQ
Sbjct: 242 EAAKRDHRKLGREMDLYHMQEEAPGQVFWHANGWLIYTQLQDYMRRKQRAGGYVEVNTPQ 301

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW+ SGHW+ Y+ +MF V+  ++  ++    ALKPMNCP HV +FN GLKSYR+L
Sbjct: 302 VVDRKLWEASGHWEKYQDHMFIVEVDEEHAREKSVNALKPMNCPCHVQIFNQGLKSYRDL 361

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFGS  R EPSG+LHG+MRVRGFTQDD H+FC ++Q+  E  K    +  IYKD 
Sbjct: 362 PLRMAEFGSCNRYEPSGALHGIMRVRGFTQDDGHIFCAEDQIEAETAKFIEFLSGIYKDL 421

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE   VK S RPEKR GSD +WD AE  +      +  + +  I   +  GEGAFYGPK
Sbjct: 422 GFENFSVKFSDRPEKRSGSDEVWDKAEAAL------LSATRKAGIEPTLNPGEGAFYGPK 475

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E++L DAIGRDWQCGT QVDF LP R +A Y+ S   K  PVM+HRA  GS ERFIGI+
Sbjct: 476 LEFVLTDAIGRDWQCGTHQVDFVLPERLDATYIGSDGAKHRPVMLHRATLGSFERFIGIL 535

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE   G LP WL+P Q +V +ITS A +Y  E+   LK+  +  + D RNE INYK+REH
Sbjct: 536 IEEHAGKLPFWLAPRQVVVASITSEADDYVHEVVATLKAQGVRADADIRNEKINYKVREH 595

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           S+ K+P+I+  G +E  E+++ +RR G   T   +L D    L  E+ PPD +
Sbjct: 596 SVGKVPVILAVGAREVEEKTVSVRRLGEKQTSVQALSDVANALGIEATPPDLR 648


>gi|134095006|ref|YP_001100081.1| threonyl-tRNA synthetase [Herminiimonas arsenicoxydans]
 gi|166223347|sp|A4G619|SYT_HERAR RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|133738909|emb|CAL61956.1| Threonyl-tRNA synthetase (Threonine--tRNA ligase) (ThrRS)
           [Herminiimonas arsenicoxydans]
          Length = 635

 Score =  686 bits (1771), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/625 (52%), Positives = 435/625 (69%), Gaps = 15/625 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           I +  PDGS + F    T + VA +I   LAK A+A  +NG V D S  + + S + IIT
Sbjct: 2   ITVRLPDGSQREFDTPVTVAQVAANIGAGLAKAALAGKVNGNVVDTSYLIEQDSDLSIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   L VIRHS AH++A AV+ ++P+ QV IGP+IE+GFYYDF  ++PF+ ++L  IE
Sbjct: 62  DKDAEGLDVIRHSTAHLLAYAVKELFPDAQVTIGPVIENGFYYDFSYKRPFTPEDLLAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           KKM E+  +D P  +Q L  + A E F+S  EAYK EI+ SIPA ++V+LY +G++ DLC
Sbjct: 122 KKMAELAKKDEPVTRQVLPRDVAVEYFKSIGEAYKAEIIASIPADQDVSLYTEGKFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV STG++K  FKLMK+AGAYWRGDS   ML RIYGTAW  ++E   YL  LEE+EK
Sbjct: 182 RGPHVPSTGKLK-VFKLMKLAGAYWRGDSKNEMLQRIYGTAWAKKEEQEAYLTMLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQ 302
           RDHRKL R +DLFH  E+  G+IFWH KGW ++Q +  YMRR  +D+ Y+E+  PQ+LD+
Sbjct: 241 RDHRKLGRALDLFHFQEEAPGLIFWHPKGWTVWQQVEQYMRRVYQDNGYQEVKAPQILDR 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHW++Y+ NMF  +  +      R++ALKPMNCPGHV +F   L+SYRELP+R 
Sbjct: 301 SLWEKSGHWENYKENMFTTESEN------RSYALKPMNCPGHVQIFASDLRSYRELPLRY 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG  +RNEPSGSLHG+MRVRGFTQDD H+FCT++Q+ +EC+    L+  +Y+DFGF  
Sbjct: 355 GEFGQCHRNEPSGSLHGMMRVRGFTQDDGHIFCTEDQILDECVAFTALLQKVYRDFGFTN 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           ++ K++TRPEKRVGSD  WD AE  +   LD    + +      +  GEGAFYGPK EY 
Sbjct: 415 VIYKVATRPEKRVGSDEAWDKAEAALIASLDRSGCTYE------ISPGEGAFYGPKIEYT 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LKDAIGR WQCGTIQVDF++P+R  A YV   + K  PVM+HRA+ GS ERFIG++IEN 
Sbjct: 469 LKDAIGRMWQCGTIQVDFSMPARLGAEYVAEDNTKKIPVMLHRAILGSFERFIGMLIENH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G LPLWL+P+Q  V  I+ +  +YAQ +A  LK     +  D RNE I YKIREHSI+K
Sbjct: 529 AGALPLWLAPVQIAVLNISDAQADYAQAVAQNLKKQGFRVHVDLRNEKITYKIREHSIQK 588

Query: 603 IPIIIICGDKEASERSIGIRRFGST 627
           +P II+ GDKE    ++ +R  G+ 
Sbjct: 589 LPYIIVIGDKERDAGTVAVRARGNV 613


>gi|83954081|ref|ZP_00962801.1| threonyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1]
 gi|83841118|gb|EAP80288.1| threonyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1]
          Length = 649

 Score =  686 bits (1771), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 326/653 (49%), Positives = 436/653 (66%), Gaps = 10/653 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           + I LT PDG+ + +    T  DVA  IS+SL KKA++  ++G   DL+ P+  + SI I
Sbjct: 2   AQITLTLPDGNARQYDAGITAGDVANDISKSLGKKAISATVDGAHYDLAWPINADASIAI 61

Query: 62  ITPED-PRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            T  D  ++  ++RH  AHIMA AVQ +WP+ +V IGP+I+DG+YYDFD+++ F+ ++L 
Sbjct: 62  HTMADEAQANELVRHDLAHIMARAVQELWPDTKVTIGPVIKDGWYYDFDRKESFTPEDLG 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEKKM+EII +  P   +    E+A + +E   E YKVE++ SIP  E + +Y  G+W 
Sbjct: 122 LIEKKMKEIINKRDPVRTEVWDRERAIKHYEDNGEPYKVELINSIPGDEPLRMYWHGDWQ 181

Query: 181 DLCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           DLCRGPH++ TGQV    FKLM +AGAYWRGDS+R ML RIYG A+  +++L  +L  LE
Sbjct: 182 DLCRGPHLQHTGQVPGDAFKLMSIAGAYWRGDSDRAMLQRIYGVAFTGKEKLKAHLNMLE 241

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+ KRDHRKL REMDL+H+ E+  G +FWH  GW I+  L  YMRRK +   Y E+NTPQ
Sbjct: 242 EAAKRDHRKLGREMDLYHMQEEAPGQVFWHANGWLIYTQLQDYMRRKQRAGGYVEVNTPQ 301

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW+ SGHW+ Y+ +MF V+  ++  ++    ALKPMNCP HV +FN GLKSYR+L
Sbjct: 302 VVDRKLWEASGHWEKYQDHMFIVEVDEEHAREKSVNALKPMNCPCHVQIFNQGLKSYRDL 361

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFGS  R EPSG+LHG+MRVRGFTQDD H+FC ++Q+  E  K    +  IYKD 
Sbjct: 362 PLRMAEFGSCNRYEPSGALHGIMRVRGFTQDDGHIFCAEDQIEAETAKFIEFLSGIYKDL 421

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE   VK S RPEKR GSD +WD AE  +      +  + +  I   +  GEGAFYGPK
Sbjct: 422 GFENFSVKFSDRPEKRSGSDEVWDKAEAAL------LSATRKAGIEPTLNPGEGAFYGPK 475

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E++L DAIGRDWQCGT QVDF LP R +A Y+ S   K  PVM+HRA  GS ERFIGI+
Sbjct: 476 LEFVLTDAIGRDWQCGTHQVDFVLPERLDATYIGSDGAKHRPVMLHRATLGSFERFIGIL 535

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE   G LP WL+P Q +V +ITS A +Y  E+   LK+  +  E D RNE INYK+REH
Sbjct: 536 IEEHAGKLPFWLAPRQVVVASITSEADDYVHEVVATLKAQGVRAEADIRNEKINYKVREH 595

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           S+ K+P+I+  G +E  E+++ +RR G   T   +L D    L  E+ PPD +
Sbjct: 596 SVGKVPVILAVGAREVEEKTVSVRRLGEKQTSVQALSDVANALGIEATPPDLR 648


>gi|146276901|ref|YP_001167060.1| threonyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17025]
 gi|166225490|sp|A4WQU1|SYT_RHOS5 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|145555142|gb|ABP69755.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Rhodobacter
           sphaeroides ATCC 17025]
          Length = 646

 Score =  686 bits (1770), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 321/650 (49%), Positives = 443/650 (68%), Gaps = 10/650 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           + I LTFPDG+ + FP   T ++VA SIS SL KKA++ +++G+  DL  P+  +  I I
Sbjct: 2   AQISLTFPDGNAREFPAGITPAEVAASISTSLGKKAISASVDGRHYDLQWPIEADAKIAI 61

Query: 62  ITPED-PRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            T  D  ++L +IRH  AHIMA AVQ +WP+V+V IGP++ +G+YYDFD+E+ F+ ++L 
Sbjct: 62  HTMADEAQALELIRHDLAHIMARAVQELWPDVKVTIGPVVANGWYYDFDREETFTPEDLG 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEK+M+EII        +    ++A   +E++ E +KVE++++IPA + + +Y  G W 
Sbjct: 122 AIEKRMKEIINARDAVRTETWDRDRAIAHYEARGENFKVELVQAIPADQQIRMYWHGNWQ 181

Query: 181 DLCRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           DLCRGPH++ TGQV    F+LM VAGAYWRGDSN   L RIYG A+ T+ EL  YL+ LE
Sbjct: 182 DLCRGPHLQHTGQVPADAFQLMSVAGAYWRGDSNNKQLQRIYGVAFKTRDELKAYLHMLE 241

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+ KRDHRKL +EM+LFH+ E+  G++FWH  GW+I++TL  YMR ++ K  Y+EI TPQ
Sbjct: 242 EAAKRDHRKLGKEMELFHLQEEAPGMVFWHPNGWQIYRTLEDYMRGRLRKAGYKEIRTPQ 301

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW+ SGHW++Y+ NMF V+  ++  K+ R  ALKPMNCP HV V+N GLKSYR+L
Sbjct: 302 VVDRKLWEASGHWEAYKENMFLVEVEEEHAKEKRINALKPMNCPCHVQVYNQGLKSYRDL 361

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFGS +R E SGS+HGLMRVRGF QDDAH+FCT++Q+  EC     L+ S+YKD 
Sbjct: 362 PLRLAEFGSCHRYESSGSMHGLMRVRGFVQDDAHIFCTEDQIEGECAAFIELLSSVYKDL 421

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+   +KLSTRPE R+GSD  WD  E  ++  +  +  + +      +  GEGAFYGPK
Sbjct: 422 GFDSFEIKLSTRPEVRIGSDEAWDKVETALENAIKKVGAAYE------IDPGEGAFYGPK 475

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++ L DAIGR WQCGT QVD NLP+R  A Y+     K  P M+HRA+ GS ERFIGI+
Sbjct: 476 LDFKLTDAIGRKWQCGTFQVDPNLPTRLGAEYIGEDGAKHRPYMLHRAILGSFERFIGIL 535

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IEN+ G LP WL+P Q +V +I S A  Y  E+   L++  +  E D RNE INYK+REH
Sbjct: 536 IENYAGKLPFWLAPRQVVVASIVSDADPYVAEVVAALRARGVRAEADTRNEKINYKVREH 595

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
           S+ K+P+I+  G +E   R++ +RR G T T+   L   +  L  ++  P
Sbjct: 596 SVGKVPVILAIGMQEVEGRTVSVRRLGETGTESAPLDQVVERLATDARIP 645


>gi|254294721|ref|YP_003060744.1| threonyl-tRNA synthetase [Hirschia baltica ATCC 49814]
 gi|254043252|gb|ACT60047.1| threonyl-tRNA synthetase [Hirschia baltica ATCC 49814]
          Length = 654

 Score =  686 bits (1770), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 315/659 (47%), Positives = 453/659 (68%), Gaps = 18/659 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           IK+T PDGS++     ++  DVAESIS+SL+K+++   +NG++ D+  P+  +  + + +
Sbjct: 2   IKITLPDGSMREIAAGSSPRDVAESISKSLSKRSIVATVNGELWDMERPLEGDSQVALHS 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +DP+ L +IRH  AHI+A+AVQ ++P  QV IGP+I+DGFYYDF +++ FS+D+  +IE
Sbjct: 62  KDDPQGLEIIRHDAAHILAQAVQKLFPGTQVTIGPVIDDGFYYDFARKEAFSTDDFEKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M  +I  D P +++  + ++A ++F+   E YK E++  +P  E +T+YRQG+WFDLC
Sbjct: 122 KEMNRVIDADYPIVREVWNRDEAIKMFKDIGEDYKAELISDLPVDETITVYRQGDWFDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           +GPH+ STG++ K FKLMK+AGAYWRGDSN   L R+YGTAW+ +++L  YL  LEE+EK
Sbjct: 182 KGPHLPSTGKLPKAFKLMKLAGAYWRGDSNNAQLQRMYGTAWSNEKDLKAYLVRLEEAEK 241

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQ 302
           RDHRKL  ++DLFH+  +  G +FWH  G+ I++ L +Y+RR+  DD Y E+ TPQ+L+ 
Sbjct: 242 RDHRKLGNQLDLFHLQSEAQGSVFWHPNGFMIWRQLEAYIRRRQDDDGYVEVKTPQLLNS 301

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDL--------RTFALKPMNCPGHVAVFNHGLKS 354
             W+QSGHW  +R NMF V     ++++            ALKPMNCP HV +F  G +S
Sbjct: 302 VFWEQSGHWSKFRENMFVVPDEIPSVEEEGPVLSGEGELMALKPMNCPAHVQIFKQGTRS 361

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YR+LP+R+AEFG  +RNEP G+LHG+MRVR  TQDDAH+FC ++Q+ NE L+  NL   +
Sbjct: 362 YRDLPLRMAEFGCCHRNEPHGALHGIMRVRQMTQDDAHIFCREDQVANETLRFLNLFKRV 421

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           Y DFG ++I  KL+TRPE+R G+D  WD AE    G L T  N +    +     GEGAF
Sbjct: 422 YGDFGLDQISYKLATRPEQRAGNDETWDQAE----GALATALNEAGLEFDYAE--GEGAF 475

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK E+ L DAIGR WQCGT+Q+D+ LP R +A YV    EK  PVM+HRAVFG+ ERF
Sbjct: 476 YGPKLEFHLTDAIGRTWQCGTLQLDYVLPERLDATYVGEDGEKHRPVMLHRAVFGTFERF 535

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
           +GI+IEN+ G  P+WL+P Q  + TIT  A  YA+++A  L++  + +E D R+E INYK
Sbjct: 536 MGILIENYAGAFPMWLAPTQVAIATITPKADAYAEKVAARLRAKGIRVELDLRHEKINYK 595

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK--VSLLDAIPILTKESLPPDCQ 651
           +REHS  K+P+I + G  EA E  + +RRFG+   +   +SL +A  +L+ E+L PD +
Sbjct: 596 VREHSHMKVPVIAVIGMNEAEEEKLALRRFGAGNARPEILSLDEACQLLSVEALAPDLR 654


>gi|304319895|ref|YP_003853538.1| Threonyl-tRNA synthetase [Parvularcula bermudensis HTCC2503]
 gi|303298798|gb|ADM08397.1| Threonyl-tRNA synthetase [Parvularcula bermudensis HTCC2503]
          Length = 657

 Score =  686 bits (1769), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 320/664 (48%), Positives = 458/664 (68%), Gaps = 25/664 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP+   +T PDG+++ +    TG+++A  IS+SLAKKA+AV +NG V DL DP++ + ++
Sbjct: 1   MPT---ITLPDGAVRTYDAPLTGAELAGDISKSLAKKALAVKVNGTVVDLWDPIKSDAAV 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EI+T +    L +IRH  AH++A+AVQ+++P+ QV IGP+IEDGF+YDF ++ PFS+++ 
Sbjct: 58  EIVTRDSEEGLDLIRHDAAHLLAQAVQALFPDTQVTIGPVIEDGFFYDFARKTPFSTEDF 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IE+KM  ++  D    K+ +S E+A  LFE++ E YK EI+  +P  E V +Y  G+W
Sbjct: 118 DAIERKMAALVDADLETRKEVVSREEAARLFEAQGEHYKAEIVRDLPTDEEVKIYHHGDW 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           +DLCRGPH+ ST  + K FKL+K+AGAYWRGD    +L RIYGTAW  ++ L  YL  LE
Sbjct: 178 YDLCRGPHLPSTKHIGKAFKLLKLAGAYWRGDHRNEVLHRIYGTAWANEKALKAYLTRLE 237

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+EKRDHR+L ++MDLFH+ E+  G +FWH KG+ ++  L +Y+RR++    Y+E+ TPQ
Sbjct: 238 EAEKRDHRRLGKQMDLFHLQEEAHGSVFWHPKGYTMWLALEAYIRRRLDAAGYKEVKTPQ 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL-----------RTFALKPMNCPGHVAV 347
           ++D  LWQ SGHW  Y  NMF V    D + D+           +  A+KPMNCP HV +
Sbjct: 298 LIDAKLWQSSGHWGKYSQNMFVVP---DEVPDVEGEGPVIDPEAKLMAVKPMNCPAHVQI 354

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
           F  G+ SYR+LP+R+AEFG  +RNEP G+LHG+MRVR FTQDDAH+FCT+EQ+  E ++ 
Sbjct: 355 FRQGITSYRDLPIRMAEFGCCHRNEPHGALHGIMRVRQFTQDDAHIFCTEEQIVEETIRF 414

Query: 408 HNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGV 467
             L  S+Y+D GFE + V ++TRPE+R+G+D  WD  E+ ++  L          +   V
Sbjct: 415 CELASSVYRDLGFEDVRVAMATRPEQRIGTDEFWDKMESALEEALIAAG------LEFEV 468

Query: 468 LLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAV 527
           L GEGAFY PK EY L+DAIGR WQCGT+Q+D  LP R +A Y++    K  P+M+HRA+
Sbjct: 469 LPGEGAFYAPKLEYHLRDAIGRSWQCGTLQLDALLPERLDAVYIDEDGAKKRPIMLHRAI 528

Query: 528 FGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR 587
            GS+ERF+GI+IEN  G +PLWL+P Q +V TIT+    +A+E A+  ++ +L +ETD R
Sbjct: 529 LGSMERFLGILIENHAGRMPLWLAPTQIVVATITTDVNAFAEEAADAFRAANLRVETDLR 588

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLP 647
           NE INYK+REHS  K+PII + G +EA ER++ +RR GS  +Q +SL +A+ +   E+LP
Sbjct: 589 NEKINYKVREHSDGKVPIIAVIGAREAEERTLSVRRLGSKQSQTLSLDEAVAVFAAEALP 648

Query: 648 PDCQ 651
           PD +
Sbjct: 649 PDLR 652


>gi|317403269|gb|EFV83787.1| threonyl-tRNA synthetase [Achromobacter xylosoxidans C54]
          Length = 650

 Score =  686 bits (1769), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 318/647 (49%), Positives = 447/647 (69%), Gaps = 20/647 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVA--VAINGKVCDLSDPVR----EGS 58
           +++T PDGS + +P   T ++VA+SI   LAK A+   V  +G    L D       +  
Sbjct: 2   VQITLPDGSQRQYPGPVTVAEVAQSIGAGLAKAALGGRVTFDGADSTLVDTSYRIEGDAR 61

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           + I+T +D   L +IRHS AH++A AV+ ++P+ QV IGP+I++GFYYDF  ++PF+ ++
Sbjct: 62  LAIVTAKDADGLDMIRHSTAHLLAYAVKELFPDAQVTIGPVIDNGFYYDFSYKRPFTPED 121

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           LA IEKKM E+  +D    ++  S + A E F+   E YK EI+ SIP+ E ++LYR+GE
Sbjct: 122 LAAIEKKMAELAKKDEVVTREVWSRDDAVEFFKGIGEKYKAEIIASIPSNEPLSLYREGE 181

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + DLCRGPHV STG++K  FKLMKVAGAYWRGDS   ML RIYGTAW T++E   YL+ L
Sbjct: 182 FIDLCRGPHVPSTGKLK-VFKLMKVAGAYWRGDSKNEMLQRIYGTAWATKEEQEAYLHML 240

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTP 297
           EE+E+RDHRK+ RE+DLFH  ++  G+IFWH KGW ++Q +  YMR   +D+ Y+E+  P
Sbjct: 241 EEAERRDHRKIGRELDLFHFQDEAPGLIFWHPKGWALWQQVEQYMRSVYRDNGYQEVKAP 300

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           Q+LD  LW+++GHWD+YR NMF  +  +      R + LKPMNCPGHV +FN GL SYRE
Sbjct: 301 QILDISLWKKTGHWDNYRENMFTTESEN------RVYGLKPMNCPGHVQIFNAGLHSYRE 354

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R  EFG  +RNEPSGSLHG+MRVRGFTQDD H+FCT+EQ+ +EC     L+  +Y+D
Sbjct: 355 LPLRYGEFGQCHRNEPSGSLHGMMRVRGFTQDDGHIFCTEEQLQDECADFTALLQKVYRD 414

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF +++ K++TRPEKR+GSD +WD AE   + ++++++ +        +  GEGAFYGP
Sbjct: 415 FGFTEVLYKVATRPEKRIGSDEVWDTAE---QALMESLRRTG---CEFEISPGEGAFYGP 468

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K EY LKDAIGR WQCGTIQVDF++P R  A YV+ + ++  PVM+HRA+ GS+ERFIG+
Sbjct: 469 KVEYTLKDAIGRHWQCGTIQVDFSMPVRLGAEYVDQNDQRRPPVMLHRAILGSLERFIGM 528

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IEN  G +P WL+P+QA+V  I+  + +YA EI   LK     +E+D R E I  KIRE
Sbjct: 529 LIENHAGAMPPWLAPVQAVVCCISEPSADYAAEITQSLKKQGFRVESDLRGEKITRKIRE 588

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           HS++K+P I++ GDKE    ++ +R  G      ++  D +  L+++
Sbjct: 589 HSLQKVPYILVVGDKEKQNGTVAVRGLGGLDLGAIAFDDFVARLSED 635


>gi|171058428|ref|YP_001790777.1| threonyl-tRNA synthetase [Leptothrix cholodnii SP-6]
 gi|238689097|sp|B1XYZ3|SYT_LEPCP RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|170775873|gb|ACB34012.1| threonyl-tRNA synthetase [Leptothrix cholodnii SP-6]
          Length = 637

 Score =  686 bits (1769), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 330/636 (51%), Positives = 442/636 (69%), Gaps = 19/636 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAIN----GKVCDLSDPVR-EGSI 59
           I +  PDGS + F    T ++VA SI   LAK A+A  I      ++ D S  +  + ++
Sbjct: 2   IAIQLPDGSRREFDGPVTVAEVAASIGAGLAKAALAGRIGTGDAARLVDTSHRIEADEAL 61

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L VIRHS AH++A AV+ ++P+ QV IGP IE+GF+YDF  ++PF+ D+L
Sbjct: 62  SIITAKDAAGLDVIRHSTAHLLAYAVKELFPDAQVTIGPTIENGFFYDFSYKRPFTPDDL 121

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A IEKKM ++ A+D P ++  +  ++A   F+S  EAYK EI+ESIPA + V+LY +G++
Sbjct: 122 AAIEKKMGDLAAKDEPVVRSVMPRDEAVSYFKSIGEAYKAEIIESIPADQAVSLYAEGKF 181

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV STG++K FFKLMKVAGAYWRGD    ML RIYGTAW T+ +L +YL  LE
Sbjct: 182 TDLCRGPHVPSTGKLK-FFKLMKVAGAYWRGDHRNEMLQRIYGTAWATKDDLQKYLVMLE 240

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQ 298
           E+EKRDHRKL RE+DLFHI E   GV+FWH KGW ++Q +  YMRR  +D+ Y+E+  PQ
Sbjct: 241 EAEKRDHRKLGRELDLFHIDEHAPGVVFWHPKGWTVWQQVEQYMRRVYRDNGYQEVKGPQ 300

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +LD+ LW+++GHWD YR NMF       T  + R +ALKPMNCPGH+ +F  G+KSYR+L
Sbjct: 301 ILDKGLWEKTGHWDKYRDNMFT------TESEKRDYALKPMNCPGHILIFKQGIKSYRDL 354

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R  EFG  +RNEPSG LHG+MRVRGFTQDD H+FCT++Q+  EC     L+  +Y DF
Sbjct: 355 PLRYGEFGQCHRNEPSGGLHGIMRVRGFTQDDGHIFCTEDQILPECDAFTTLLQKVYADF 414

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF +I+ K++TRPEKR+GSD LWD AE     ++ +++NS        +  GEGAFYGPK
Sbjct: 415 GFTEILYKVATRPEKRIGSDELWDKAE---AALIASLRNSG---CEFEISPGEGAFYGPK 468

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            EY LKDA+GR WQCGTIQVDF+LP R +A YV    E+ HPVM+HRA+ GS+ERFIGI+
Sbjct: 469 VEYTLKDALGRHWQCGTIQVDFSLPERLDAEYVAESGERLHPVMLHRAILGSLERFIGIL 528

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE   G LP WL+P Q  V  IT    +YA+++A  L+   L +  D RNE I YKIREH
Sbjct: 529 IEEHAGALPFWLAPTQVSVLNITDGQADYARDVARSLQKQGLRVALDLRNEKITYKIREH 588

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           S++K+P +I+ GDKE +  ++ +R  G+     ++L
Sbjct: 589 SLQKVPYLIVVGDKERASGAVAVRARGNQDLGVMAL 624


>gi|149200873|ref|ZP_01877848.1| threonyl-tRNA synthetase [Roseovarius sp. TM1035]
 gi|149145206|gb|EDM33232.1| threonyl-tRNA synthetase [Roseovarius sp. TM1035]
          Length = 648

 Score =  685 bits (1768), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 327/651 (50%), Positives = 438/651 (67%), Gaps = 10/651 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
           + I L+FPDG+ + +    T ++VA SIS SLAK+A++  ++G   DL  P+ R+ +I I
Sbjct: 2   AQISLSFPDGNAREYSAGVTPAEVAASISPSLAKRAISAHVDGAHWDLQWPIDRDATISI 61

Query: 62  IT-PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            T  +D  +L +IRH  AHIMA AVQ IWP+V+V IGP+I +G+YYDFD+  PF+ ++L 
Sbjct: 62  NTIKDDAPALELIRHDLAHIMARAVQEIWPDVKVTIGPVIANGWYYDFDRTAPFTPEDLG 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEKKM+EII    P   +    ++A + +    E YKVE++E+IP  E + +Y  G+W 
Sbjct: 122 LIEKKMKEIINLRDPVRTEIWERDRAIQHYRDTGEPYKVELIEAIPGSEPLRMYWHGDWQ 181

Query: 181 DLCRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           DLCRGPH+++TGQV    FKLM VAGAYWRGDS RPML RIYG A+  +  L  YL FLE
Sbjct: 182 DLCRGPHLQNTGQVPADAFKLMSVAGAYWRGDSTRPMLQRIYGVAFQNRDALKDYLNFLE 241

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+++RDHRKL REMDLFH+ E+  G +FWH  GW ++ TL  YMRR+ +   Y E+NTPQ
Sbjct: 242 EADRRDHRKLGREMDLFHMQEEAPGQVFWHPNGWTVYTTLQDYMRRQQRRGGYVEVNTPQ 301

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHW+ Y+ NMF V+  +D  ++    ALKPMNCP HV +FN GLKSYR+L
Sbjct: 302 VVDRKLWERSGHWEKYQENMFIVEVDEDHAREKAVNALKPMNCPCHVQIFNQGLKSYRDL 361

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFGS  R EPSG+LHG+MRVRGFTQDDAH+FCT++Q+ +E  +    +  IY D 
Sbjct: 362 PLRMAEFGSCNRYEPSGALHGIMRVRGFTQDDAHIFCTEDQIESETARFITFLSGIYTDL 421

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF    V  STRP+ R GSD +WD AE  +      +  +    I   V  GEGAFYGPK
Sbjct: 422 GFPNFEVLFSTRPDVRAGSDEVWDKAEAAL------LSATRAAGIEPKVNPGEGAFYGPK 475

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ L DAIGR WQCGT QVDF LP R +A Y+ +   K  PVM+HRAV GS ERFIGI+
Sbjct: 476 LEFTLTDAIGRKWQCGTHQVDFVLPERLDANYIGTDGAKHRPVMLHRAVLGSFERFIGIL 535

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE   G LP WL+P Q +V +I S A +Y  ++A  L   ++  E D RNE INYK+REH
Sbjct: 536 IEEHAGRLPFWLAPRQVVVASIVSEADDYVTKVAQNLTDLNIRAEADTRNEKINYKVREH 595

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPD 649
           S+ K+P+I+ CG +E  + ++ +RR G   ++ V L      L +E+ PPD
Sbjct: 596 SLGKVPVILACGPREVEDGTVSLRRLGEKDSRIVPLDQVAAELAREATPPD 646


>gi|254487235|ref|ZP_05100440.1| threonyl-tRNA synthetase [Roseobacter sp. GAI101]
 gi|214044104|gb|EEB84742.1| threonyl-tRNA synthetase [Roseobacter sp. GAI101]
          Length = 648

 Score =  685 bits (1768), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 331/653 (50%), Positives = 436/653 (66%), Gaps = 10/653 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
           + I LT PDG+ + +    T  DVA  IS+SL KKA++  +NG   DL+ P+  + SI I
Sbjct: 2   AQITLTLPDGNARQYDAGITAGDVANDISKSLGKKAISATVNGAHFDLAWPIDADASIAI 61

Query: 62  ITPEDP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            T  D  ++  ++RH  AHIMA AVQ IWP+ +V IGP+I+DG+YYDFD+ +PF+ ++L 
Sbjct: 62  HTMADEDQANELVRHDLAHIMARAVQEIWPDTKVTIGPVIKDGWYYDFDRAEPFTPEDLG 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEKKM+EII    P   +     +A + ++   E YKVE++ESIP  E + +Y  G+W 
Sbjct: 122 VIEKKMKEIINARDPVRTEVWDRPRAIKHYQDLDELYKVELIESIPGDEPLRMYWHGDWQ 181

Query: 181 DLCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           DLCRGPH++ TGQV    FKLM +AGAYWRGDSNR ML RIYG A+  +++L  +L  LE
Sbjct: 182 DLCRGPHLQHTGQVPGDSFKLMSIAGAYWRGDSNRAMLQRIYGVAFTGKEKLRAHLNMLE 241

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+ KRDHRKL REMDLFH+ E+  G +FWH  GW I+  L  YMRRK +   Y E+NTPQ
Sbjct: 242 EAAKRDHRKLGREMDLFHMQEEAPGQVFWHPNGWLIYTQLQDYMRRKQRAGGYVEVNTPQ 301

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHWD Y+ +MF V+  ++  ++    ALKPMNCP HV +FN G+KSYR+L
Sbjct: 302 VVDRKLWEKSGHWDKYQDHMFIVEVDEEHAREKSVNALKPMNCPCHVQIFNQGMKSYRDL 361

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFGS  R EPSG+LHG+MRVRGFTQDD H+FC ++Q+  E L     + +IYKD 
Sbjct: 362 PLRMAEFGSCNRYEPSGALHGIMRVRGFTQDDGHIFCREDQIEEETLIYIEFLSAIYKDL 421

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE   VK S RP+ R GSD +WD AE  +     T K   +  IN G    EGAFYGPK
Sbjct: 422 GFENFKVKFSDRPDTRAGSDEVWDKAEAALLSA--TRKAGIEPEINPG----EGAFYGPK 475

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E++L DAIGRDWQCGT QVDF LP R +A +V S   K  PVM+HRA  GS ERFIGI+
Sbjct: 476 LEFVLTDAIGRDWQCGTHQVDFVLPERLDATFVGSDGAKHRPVMLHRATLGSFERFIGIL 535

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE   G LP WL+P Q +V +ITS A +Y +E+   L +  +  E D RNE INYK+REH
Sbjct: 536 IEEHAGKLPFWLAPRQVVVASITSEADDYVREVIETLTAAGVRAEADTRNEKINYKVREH 595

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           S+ K+P+I+  G +E  E+++ +RR G   T   SL D    L  E+ PPD +
Sbjct: 596 SVGKVPVILAVGAREVEEKTVSVRRLGEKQTSVQSLADVAAALGIEATPPDLR 648


>gi|163735041|ref|ZP_02142478.1| threonyl-tRNA synthetase [Roseobacter litoralis Och 149]
 gi|161391823|gb|EDQ16155.1| threonyl-tRNA synthetase [Roseobacter litoralis Och 149]
          Length = 648

 Score =  685 bits (1767), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 323/651 (49%), Positives = 437/651 (67%), Gaps = 10/651 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           + I LTFPDGS + F    T  DVA SIS SL KKA++  + G+  DL+ P+  + +I I
Sbjct: 2   AQISLTFPDGSAREFDAGVTAGDVAASISTSLRKKAISATVGGEHYDLAWPISADTTIAI 61

Query: 62  ITPED-PRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            T +D  ++  ++RH  AHIMA AVQ IWPE +V IGP+I+DG+YYDFD+ +PFS ++L 
Sbjct: 62  HTMQDEAQANELVRHDLAHIMARAVQEIWPETKVTIGPVIKDGWYYDFDRAEPFSPEDLG 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEKKM+EII +  P   +     +A   +E+  E YKVE++++IP  E + +Y  G+W 
Sbjct: 122 LIEKKMKEIINKRDPVRTEVWDRPRAIAFYEANNEPYKVELIDAIPGDEPLRMYWHGDWQ 181

Query: 181 DLCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           DLCRGPH++ TGQV    FKLM +AGAYWRGDS+R ML RIYG A+  +++L  +L  LE
Sbjct: 182 DLCRGPHLQHTGQVPGDAFKLMSIAGAYWRGDSDRAMLQRIYGVAFTGKEKLKAHLTMLE 241

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+ KRDHRKL REMDLFH+ E+  G +FWH  GW I+ TL  YMRRK +   Y+E+NTPQ
Sbjct: 242 EAAKRDHRKLGREMDLFHMQEEAPGQVFWHPNGWSIYTTLQDYMRRKQRAAGYQEVNTPQ 301

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW+ SGHWD Y+ +MF V+  ++  ++    ALKPMNCP HV +FN GLKSYR+L
Sbjct: 302 VVDRKLWEASGHWDKYQEHMFIVEVDEEHAREKAVNALKPMNCPCHVQIFNQGLKSYRDL 361

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFGS  R EPSG+LHG+MRVRGFTQDD H+FC ++Q+  EC      + S+Y+D 
Sbjct: 362 PLRMAEFGSCNRYEPSGALHGIMRVRGFTQDDGHIFCREDQIEAECAAFITYLSSVYQDL 421

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFEK  +  +TRPEKRVGS+  WD  E  ++  +    +         +  GEGAFYGPK
Sbjct: 422 GFEKFEIMFATRPEKRVGSEESWDHVEAALENAIKATGHPYT------LDAGEGAFYGPK 475

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++ L DAIGR+WQCGT QVD NLP R +A ++     K  P M+HRA  GS ERFIGI+
Sbjct: 476 LDFKLTDAIGREWQCGTFQVDPNLPERLDATFIGEDGAKHRPYMLHRACLGSFERFIGIL 535

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IEN  G LP WL+P Q +V +I + A +Y  ++ + LK+  +  E D RNE INYK+REH
Sbjct: 536 IENSAGKLPFWLAPRQVVVASIITDANDYVMQVVDQLKAAGVRAEADLRNEKINYKVREH 595

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPD 649
           S+ K+P+I+  G +E  E+++ +RR G   T   SL      L +E+ PPD
Sbjct: 596 SVGKVPVILAVGAREVEEQTVTLRRLGEKKTTVESLEAVTQALGREATPPD 646


>gi|77463957|ref|YP_353461.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Rhodobacter
           sphaeroides 2.4.1]
 gi|123757748|sp|Q3J0X4|SYT_RHOS4 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|77388375|gb|ABA79560.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Rhodobacter
           sphaeroides 2.4.1]
          Length = 646

 Score =  684 bits (1766), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 321/650 (49%), Positives = 441/650 (67%), Gaps = 10/650 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           + I LTFPDG  + FP   T ++VA SIS SL KKA++ +++G+  DL  P+  +  I I
Sbjct: 2   AQISLTFPDGKAREFPAGITPAEVAASISTSLGKKAISASVDGRHYDLQWPIETDAKIAI 61

Query: 62  ITPED-PRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            T  D  ++L +IRH  AHIMA AVQ +WP+V+V IGP++ +G+YYDFD+E+ F+ ++L 
Sbjct: 62  HTMADEAQALELIRHDLAHIMARAVQELWPDVKVTIGPVVANGWYYDFDREETFTPEDLG 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEK+M+EII        +     +A   +E + E +KVE++++IP  +++ +Y  G W 
Sbjct: 122 AIEKRMKEIINAREAVKTELWERARAIAYYEERGEPFKVELVQAIPEDQSIRMYWHGGWQ 181

Query: 181 DLCRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           DLCRGPH++ TGQV    FKLM VAGAYWRGDS    L RIYG A+ T+ EL  YL+ LE
Sbjct: 182 DLCRGPHLQHTGQVPADAFKLMSVAGAYWRGDSANKQLQRIYGVAFKTRDELKAYLHMLE 241

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+ KRDHRKL REM+LFH+ E+  G++FWH  GW+I++TL  YMR +++   Y+EI TPQ
Sbjct: 242 EAAKRDHRKLGREMELFHLQEEAPGMVFWHPNGWQIYRTLEDYMRGRLRQAGYKEIRTPQ 301

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW+ SGHW++Y+ NMF V+  ++  K+ R  ALKPMNCP HV V+N GLKSYR+L
Sbjct: 302 VVDRKLWEASGHWEAYKENMFIVEVEEEHAKEKRINALKPMNCPCHVQVYNQGLKSYRDL 361

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFGS +R E SGS+HGLMRVRGF QDDAH+FCT++Q+ +EC     L+ S+YKD 
Sbjct: 362 PLRLAEFGSCHRYESSGSMHGLMRVRGFVQDDAHIFCTEDQIESECAAFIELLSSVYKDL 421

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+   +KLSTRPE R+GSD  WD  E  ++  +  +  + +      +  GEGAFYGPK
Sbjct: 422 GFDSFEIKLSTRPEVRIGSDEAWDKVETALENAIRKVGAAYE------IDPGEGAFYGPK 475

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++ L DAIGR WQCGT QVD NLP+R  A Y+     K  P M+HRA+ GS ERFIGI+
Sbjct: 476 LDFKLTDAIGRKWQCGTFQVDPNLPTRLGAEYIGEDGAKHRPYMLHRAILGSFERFIGIL 535

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IEN+ G LP WL+P Q +V +I S A  Y  E+   L++  +  E D RNE INYK+REH
Sbjct: 536 IENYAGKLPFWLAPRQVVVASIVSDADPYVAEVVAALRARGVRAEADTRNEKINYKVREH 595

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
           S+ K+P+I+  G +E   RS+ +RR G T T+ + L   +  L  ++  P
Sbjct: 596 SVGKVPVILAIGMQEVEARSVSVRRLGETRTESMGLDQVVDQLAADARIP 645


>gi|126462800|ref|YP_001043914.1| threonyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029]
 gi|166225489|sp|A3PLC6|SYT_RHOS1 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|126104464|gb|ABN77142.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Rhodobacter
           sphaeroides ATCC 17029]
          Length = 646

 Score =  684 bits (1766), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 321/650 (49%), Positives = 441/650 (67%), Gaps = 10/650 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           + I LTFPDG  + FP   T ++VA SIS SL KKA++ +++G+  DL  P+  +  I I
Sbjct: 2   AQISLTFPDGKAREFPAGITPAEVAASISTSLGKKAISASVDGRHYDLQWPIETDAKIAI 61

Query: 62  ITPED-PRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            T  D  ++L +IRH  AHIMA AVQ +WP+V+V IGP++ +G+YYDFD+E+ F+ ++L 
Sbjct: 62  HTMADEAQALELIRHDLAHIMARAVQELWPDVKVTIGPVVANGWYYDFDREETFTPEDLG 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEK+M+EII        +     +A   +E + E +KVE++++IP  +++ +Y  G W 
Sbjct: 122 AIEKRMKEIINAREAVKTELWERARAIGYYEERGEPFKVELVQAIPEDQSIRMYWHGGWQ 181

Query: 181 DLCRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           DLCRGPH++ TGQV    FKLM VAGAYWRGDS    L RIYG A+ T+ EL  YL+ LE
Sbjct: 182 DLCRGPHLQHTGQVPADAFKLMSVAGAYWRGDSANKQLQRIYGVAFKTRDELKAYLHMLE 241

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+ KRDHRKL REM+LFH+ E+  G++FWH  GW+I++TL  YMR +++   Y+EI TPQ
Sbjct: 242 EAAKRDHRKLGREMELFHLQEEAPGMVFWHPNGWQIYRTLEDYMRGRLRQAGYKEIRTPQ 301

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW+ SGHW++Y+ NMF V+  ++  K+ R  ALKPMNCP HV V+N GLKSYR+L
Sbjct: 302 VVDRKLWEASGHWEAYKENMFIVEVEEEHAKEKRINALKPMNCPCHVQVYNQGLKSYRDL 361

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFGS +R E SGS+HGLMRVRGF QDDAH+FCT++Q+ +EC     L+ S+YKD 
Sbjct: 362 PLRLAEFGSCHRYESSGSMHGLMRVRGFVQDDAHIFCTEDQIESECAAFIELLSSVYKDL 421

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+   +KLSTRPE R+GSD  WD  E  ++  +  +  + +      +  GEGAFYGPK
Sbjct: 422 GFDSFEIKLSTRPEVRIGSDEAWDKVETALENAIRKVGAAYE------IDPGEGAFYGPK 475

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++ L DAIGR WQCGT QVD NLP+R  A Y+     K  P M+HRA+ GS ERFIGI+
Sbjct: 476 LDFKLTDAIGRKWQCGTFQVDPNLPTRLGAEYIGEDGAKHRPYMLHRAILGSFERFIGIL 535

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IEN+ G LP WL+P Q +V +I S A  Y  E+   L++  +  E D RNE INYK+REH
Sbjct: 536 IENYAGKLPFWLAPRQVVVASIVSDADPYVAEVVAALRARGVRAEADTRNEKINYKVREH 595

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
           S+ K+P+I+  G +E   RS+ +RR G T T+ + L   +  L  ++  P
Sbjct: 596 SVGKVPVILAIGMQEVEARSVSVRRLGETRTESMGLDQVVDQLAADARIP 645


>gi|221197733|ref|ZP_03570779.1| threonyl-tRNA synthetase [Burkholderia multivorans CGD2M]
 gi|221204709|ref|ZP_03577726.1| threonyl-tRNA synthetase [Burkholderia multivorans CGD2]
 gi|221175566|gb|EEE07996.1| threonyl-tRNA synthetase [Burkholderia multivorans CGD2]
 gi|221181665|gb|EEE14066.1| threonyl-tRNA synthetase [Burkholderia multivorans CGD2M]
          Length = 635

 Score =  684 bits (1765), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 314/625 (50%), Positives = 437/625 (69%), Gaps = 15/625 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           + +  PDGS++ +    T ++VA SI   LAK A+   ++G++ D S  +  + S+ I+T
Sbjct: 2   VSIRLPDGSVRQYEHPVTVAEVAASIGPGLAKAALGGKLDGELVDTSAVIDHDASLAIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +DP  L +IRHS AH++A AV+ ++P+ QV IGP+I++GFYYDF   +PF+ ++L +IE
Sbjct: 62  DKDPDGLDIIRHSTAHLLAYAVKELYPDAQVTIGPVIDNGFYYDFAYHRPFTPEDLEKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+MQE+  +D P  ++ +S ++A   F S  E YK EI+ESIP  + + LY  G + DLC
Sbjct: 122 KRMQELAKKDEPVTRRVVSRDEAAGYFRSIGEKYKAEIIESIPESDEIKLYSHGGFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV STG++K  FKLMKVAGAYWRGDS    L RIYGTAW  +++  QYL+ LEE+EK
Sbjct: 182 RGPHVPSTGKLK-VFKLMKVAGAYWRGDSKNEQLQRIYGTAWTKKEDQDQYLHMLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ E+  G++FWH KGW ++Q +  YMRR++ +  Y EI TP ++D+
Sbjct: 241 RDHRKLGKQLDLFHMQEESPGMVFWHPKGWALWQQVEQYMRRRVNEAGYLEIKTPMIMDR 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW +YR NMF       T  + R +A+KPMNCPGHV VF HGL+SYR+LP+R 
Sbjct: 301 SLWEASGHWQNYRENMFT------TESEKRDYAIKPMNCPGHVQVFKHGLRSYRDLPLRY 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNE SG+LHGLMRVRGF QDDAH+FCT+EQ   E +  + L +S+YKDFGFE 
Sbjct: 355 AEFGSCHRNEASGALHGLMRVRGFVQDDAHIFCTEEQFIAESIAFNTLAMSVYKDFGFEH 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I +KLS RPE+R G+D  WD AE  ++  L     S ++      L GEGAFYGPK EY 
Sbjct: 415 IDIKLSLRPEQRAGTDETWDRAEQGLRDALTACGLSWEE------LPGEGAFYGPKIEYH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+GR WQCGT+Q+D  LP R  A YV   + +  PVM+HRA+ GS+ERF+GI+IE+ 
Sbjct: 469 IKDALGRSWQCGTLQLDMVLPERLGAEYVAEDNSRRRPVMLHRAIVGSMERFLGILIEHH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G +P+WL+P+QA+V  I  S VEYAQ +A  L+   + +  D RNE I+YKIREH+++K
Sbjct: 529 AGAMPVWLAPVQAVVLNIAESQVEYAQSLAQTLQKQGVRVTADLRNEKISYKIREHTLEK 588

Query: 603 IPIIIICGDKEASERSIGIRRFGST 627
           +P +++ GDKE   +++ +R  G  
Sbjct: 589 VPYLLVVGDKERDAQTVAVRARGGV 613


>gi|254477067|ref|ZP_05090453.1| threonyl-tRNA synthetase [Ruegeria sp. R11]
 gi|214031310|gb|EEB72145.1| threonyl-tRNA synthetase [Ruegeria sp. R11]
          Length = 648

 Score =  684 bits (1765), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 325/651 (49%), Positives = 438/651 (67%), Gaps = 10/651 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEI 61
           + I LTFPDG+ +++    T ++VA SIS SL KKA++  +N +  DL  P+ +  +I I
Sbjct: 2   AQISLTFPDGNARSYDAGITPAEVAASISTSLGKKAISATVNDQHWDLQWPINDDAAIAI 61

Query: 62  ITPEDP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            T +D  ++  +IRH  AHIMA AVQ IWP+ +V IGP+I++G+YYDFD+ +PF+ ++L 
Sbjct: 62  HTMKDEEQANELIRHDLAHIMARAVQEIWPDTKVTIGPVIDNGWYYDFDRAEPFTPEDLG 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEKKM++II +      +    ++A + +    E YKVE++ESIP  E + +Y  G+W 
Sbjct: 122 AIEKKMKDIINKRDEVRTEVWERDRAIQHYTDNNEPYKVELIESIPGDEPLRMYWHGDWQ 181

Query: 181 DLCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           DLCRGPH++ TGQV    FKLM +AGAYWRGDS+R ML RIYG A+  +++L  +L  LE
Sbjct: 182 DLCRGPHLQHTGQVPGDAFKLMSIAGAYWRGDSDRAMLQRIYGVAFTGKEKLKAHLTMLE 241

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+ KRDHRKL +EM LFH+ E+  G +FWH  GW+I+  L  YMRR + +D Y E+NTPQ
Sbjct: 242 EAAKRDHRKLGKEMGLFHMQEEAPGQVFWHPNGWRIYTQLQDYMRRMQDRDGYVEVNTPQ 301

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHWD Y+ NMF V+  +D  ++    ALKPMNCP HV VFN GLKSYR+L
Sbjct: 302 VVDRKLWEKSGHWDKYQENMFIVEVDEDHAREKAVNALKPMNCPCHVQVFNQGLKSYRDL 361

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFGS  R EPSG+LHG+MRVRGFTQDD H+FC ++Q+ +E  K    +  +Y D 
Sbjct: 362 PLRMAEFGSCARYEPSGALHGIMRVRGFTQDDGHIFCAEDQITSETAKFIAFLSKVYADL 421

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF    +KLSTRPEKR+GSD  WD  E  +    +  K +  D     +L GEGAFYGPK
Sbjct: 422 GFHNWTIKLSTRPEKRIGSDETWDHMEQALG---EACKAAGYD---FEILEGEGAFYGPK 475

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ L DAIGR+WQCGT+QVD NLP R  A ++     K  PVM+HRA  GS ERFIGI+
Sbjct: 476 LEFTLTDAIGRNWQCGTLQVDANLPERLEATFIGQDGAKHRPVMLHRACLGSFERFIGIL 535

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE   G LP WL+P Q +V +ITS A +Y  E+   LK+  +  E D RNE INYK+REH
Sbjct: 536 IEEHAGKLPFWLAPRQVVVASITSEADDYVLEVVEQLKAAGVRAEADMRNEKINYKVREH 595

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPD 649
           S+ K+P+I+  G +E  ER++ +RR G   T+  SL      L  E+ PPD
Sbjct: 596 SVGKVPVILAVGAREVEERTVSVRRLGEKQTKVESLETVTKTLATEATPPD 646


>gi|83647272|ref|YP_435707.1| threonyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
 gi|123753567|sp|Q2SDJ2|SYT_HAHCH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|83635315|gb|ABC31282.1| threonyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
          Length = 637

 Score =  684 bits (1765), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 320/618 (51%), Positives = 430/618 (69%), Gaps = 15/618 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS + F    T  DVA  I   LAK AVA  ++G + D S  + ++  + I+T  
Sbjct: 4   ITLPDGSKREFSNPVTVLDVAADIGPGLAKAAVAGKVDGTLVDCSHVIDKDAELAIVTER 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   + VIRHS AH++A AVQSI+P  QV IGP+IEDGFYYDF  E+PF+ D+L +IE+K
Sbjct: 64  DAEGVEVIRHSSAHLLAMAVQSIFPSAQVTIGPVIEDGFYYDFAFERPFTPDDLVKIEEK 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           MQE+   D P  +  +S  +A ELF+   E YKVEI+ SIP +EN++ Y QG++ DLCRG
Sbjct: 124 MQELSDADLPVTRSLMSRSEAVELFKKMGEEYKVEIIASIPTEENLSFYSQGDFIDLCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV STG++K F KL KVAGAYWRGDSN  ML RIYGTAW  +++L  YL+ +EE+EKRD
Sbjct: 184 PHVPSTGKIKAF-KLTKVAGAYWRGDSNNAMLQRIYGTAWGNKKDLKAYLHRIEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHL 304
           HRK+ +++ LFH+ E+  G++FWH  GW ++Q +  YMR+++ K DY+EI TPQV+++ L
Sbjct: 243 HRKIGKKLGLFHMQEEAPGMVFWHSDGWTLYQVIEQYMRKQLRKHDYKEIKTPQVVERTL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHW+ +R +MF  +  D      R FA+KPMNCP HV VFN GL+SYR+LP+RLAE
Sbjct: 303 WEKSGHWEKFRDDMFTTQSED------RDFAIKPMNCPCHVQVFNQGLRSYRDLPLRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNE SG+LHGLMRVRGFTQDDAH+FCT+EQ+  E  K  + +  +Y DFGF +I+
Sbjct: 357 FGSCHRNEASGALHGLMRVRGFTQDDAHIFCTEEQIQEEVGKFIDFLHEVYADFGFSEII 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
            KLSTRPEKRVGSD +WD +E  +   LD      ++      L GEGAFYGPK E+ LK
Sbjct: 417 YKLSTRPEKRVGSDEIWDKSEKALADALDAKGLPWEE------LPGEGAFYGPKVEFSLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D +GR WQCGT+QVDF++P R  A YV+    +  PVM+HRA+ GS ERFIGI+IE+++G
Sbjct: 471 DCLGRLWQCGTVQVDFSMPGRLGAQYVSDEQVRKTPVMLHRAILGSFERFIGILIEHYEG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P WL+P Q  +  IT    +Y ++I  +L      +  D RNE INYKIREH++ ++P
Sbjct: 531 AFPSWLAPTQVAILNITDKQADYCKKIGEILNDKGFRVRLDLRNEKINYKIREHTLNRVP 590

Query: 605 IIIICGDKEASERSIGIR 622
            + + GDKE   + + IR
Sbjct: 591 FLAVVGDKEVETQCLAIR 608


>gi|73540970|ref|YP_295490.1| threonyl-tRNA synthetase [Ralstonia eutropha JMP134]
 gi|123732957|sp|Q472N7|SYT_RALEJ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|72118383|gb|AAZ60646.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Ralstonia
           eutropha JMP134]
          Length = 635

 Score =  684 bits (1765), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 320/625 (51%), Positives = 433/625 (69%), Gaps = 15/625 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I +T PDGS + FP   T ++VA+SI   LAK A+A  ++G + D S  + R+ ++ IIT
Sbjct: 2   IAITLPDGSRREFPGPVTVAEVAQSIGTGLAKAALAGKVDGNLVDTSYSIDRDVALAIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   + VIRHS AH++A AV+ ++P+ QV IGP+IE+GFYYDF  ++PF+ ++LA IE
Sbjct: 62  DKDADGVDVIRHSTAHLLAYAVKELYPDAQVTIGPVIENGFYYDFAYKRPFTPEDLAAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           KKM E+  +D    ++  + ++A  LFES  E YK EI+ SIPA + + LYR+G++ DLC
Sbjct: 122 KKMTELSRKDEKVTREVWNRDEAVALFESMGEKYKAEIIASIPADQEIGLYREGKFVDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV STG++K  FKLMKVAGAYWRGD+N  ML RIYGTAW  +++   YL+ LEE+EK
Sbjct: 182 RGPHVPSTGKLK-VFKLMKVAGAYWRGDANNEMLQRIYGTAWAKKEDQEAYLHMLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQ 302
           RDHRKL + +DLFH+ E+  G++FWH KGW+++Q +  YMR R     Y+E+ TPQV+D+
Sbjct: 241 RDHRKLGKSLDLFHLQEEAPGMVFWHPKGWQVWQAVEQYMRGRLTAAGYDEVRTPQVMDR 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHW +Y+ NMF       T  + R +A+KPMNCPGHV +FNHGL+SYR+LP+RL
Sbjct: 301 SLWEKSGHWQNYKENMFV------TESEKRDYAIKPMNCPGHVQIFNHGLRSYRDLPLRL 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFG+ +RNEPSG+LHGLMRVRGF QDDAH+FCT+EQ+  E    + L  S+Y DFGF+ 
Sbjct: 355 AEFGACHRNEPSGALHGLMRVRGFVQDDAHIFCTEEQIVAEAKAFNELAFSVYDDFGFKD 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + VKLS RP +R GSD +WD AE  ++  L          ++   L GEGAFYGPK EY 
Sbjct: 415 VAVKLSLRPAQRAGSDEVWDHAEEGLRLALRACG------VDWEELPGEGAFYGPKVEYH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDAIGR WQCGT+Q+D  LP R  A YV   + +  PVM+HRA+ GS ERF+GI++EN 
Sbjct: 469 IKDAIGRSWQCGTLQLDLVLPERLGAEYVAEDNSRKRPVMLHRAILGSFERFLGILLENH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G LP WL+P Q +V  I  S  EYA+ +   L       + D RNE I YKIREHS++K
Sbjct: 529 AGALPAWLAPEQVVVMNIAESQAEYAENVVQSLLKQGFRAKADLRNEKITYKIREHSLQK 588

Query: 603 IPIIIICGDKEASERSIGIRRFGST 627
           IP +++ GDKE     + +R  G+ 
Sbjct: 589 IPYLLVVGDKERDANQVAVRARGNV 613


>gi|332558829|ref|ZP_08413151.1| threonyl-tRNA synthetase [Rhodobacter sphaeroides WS8N]
 gi|332276541|gb|EGJ21856.1| threonyl-tRNA synthetase [Rhodobacter sphaeroides WS8N]
          Length = 646

 Score =  684 bits (1764), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 320/650 (49%), Positives = 441/650 (67%), Gaps = 10/650 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           + I LTFPDG  + FP   T ++VA SIS SL KKA++ +++G+  DL  P+  +  I I
Sbjct: 2   AQISLTFPDGKAREFPAGITPAEVAASISTSLGKKAISASVDGRHYDLQWPIETDAKIAI 61

Query: 62  ITPED-PRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            T  D  ++L +IRH  AHIMA AVQ +WP+V+V IGP++ +G+YYDFD+++ F+ ++L 
Sbjct: 62  HTMADEAQALELIRHDLAHIMARAVQELWPDVKVTIGPVVANGWYYDFDRDETFTPEDLG 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEK+M+EII        +     +A   +E + E +KVE++++IP  +++ +Y  G W 
Sbjct: 122 AIEKRMKEIINAREAVKTELWERARAIAYYEERGEPFKVELVQAIPEDQSIRMYWHGGWQ 181

Query: 181 DLCRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           DLCRGPH++ TGQV    FKLM VAGAYWRGDS    L RIYG A+ T+ EL  YL+ LE
Sbjct: 182 DLCRGPHLQHTGQVPADAFKLMSVAGAYWRGDSANKQLQRIYGVAFKTRDELKAYLHMLE 241

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+ KRDHRKL REM+LFH+ E+  G++FWH  GW+I++TL  YMR +++   Y+EI TPQ
Sbjct: 242 EAAKRDHRKLGREMELFHLQEEAPGMVFWHPNGWQIYRTLEDYMRGRLRQAGYKEIRTPQ 301

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW+ SGHW++Y+ NMF V+  ++  K+ R  ALKPMNCP HV V+N GLKSYR+L
Sbjct: 302 VVDRKLWEASGHWEAYKENMFIVEVEEEHAKEKRINALKPMNCPCHVQVYNQGLKSYRDL 361

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFGS +R E SGS+HGLMRVRGF QDDAH+FCT++Q+ +EC     L+ S+YKD 
Sbjct: 362 PLRLAEFGSCHRYESSGSMHGLMRVRGFVQDDAHIFCTEDQIESECAAFIELLSSVYKDL 421

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+   +KLSTRPE R+GSD  WD  E  ++  +  +  + +      +  GEGAFYGPK
Sbjct: 422 GFDSFEIKLSTRPEVRIGSDEAWDKVETALENAIKKVGAAYE------IDPGEGAFYGPK 475

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++ L DAIGR WQCGT QVD NLP+R  A Y+     K  P M+HRA+ GS ERFIGI+
Sbjct: 476 LDFKLTDAIGRKWQCGTFQVDPNLPTRLGAEYIGEDGAKHRPYMLHRAILGSFERFIGIL 535

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IEN+ G LP WL+P Q +V +I S A  Y  E+   L++  +  E D RNE INYK+REH
Sbjct: 536 IENYAGKLPFWLAPRQVVVASIVSDADPYVAEVVAALRARGVRAEADTRNEKINYKVREH 595

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
           S+ K+P+I+  G +E   RS+ +RR G T T+ + L   +  L  ++  P
Sbjct: 596 SVGKVPVILAIGMQEVEARSVSVRRLGETRTESMGLDQVVDQLAADARIP 645


>gi|221214904|ref|ZP_03587872.1| threonyl-tRNA synthetase [Burkholderia multivorans CGD1]
 gi|221165131|gb|EED97609.1| threonyl-tRNA synthetase [Burkholderia multivorans CGD1]
          Length = 635

 Score =  684 bits (1764), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 314/625 (50%), Positives = 437/625 (69%), Gaps = 15/625 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           + +  PDGS++ +    T ++VA SI   LAK A+   ++G++ D S  +  + S+ I+T
Sbjct: 2   VSIRLPDGSVRQYEHPVTVAEVAASIGPGLAKAALGGKLDGELVDTSAVIDHDASLAIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +DP  L +IRHS AH++A AV+ ++P+ QV IGP+I++GFYYDF   +PF+ ++L +IE
Sbjct: 62  DKDPDGLDIIRHSTAHLLAYAVKELYPDAQVTIGPVIDNGFYYDFAYHRPFTPEDLEKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+MQE+  +D P  ++ +S ++A   F S  E YK EI+ESIP  + + LY  G + DLC
Sbjct: 122 KRMQELAKKDEPVTRRVVSRDEAAGYFRSIGEKYKAEIIESIPESDEIKLYSHGGFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV STG++K  FKLMKVAGAYWRGDS    L RIYGTAW  +++  QYL+ LEE+EK
Sbjct: 182 RGPHVPSTGKLK-VFKLMKVAGAYWRGDSKNEQLQRIYGTAWTRKEDQDQYLHMLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ E+  G++FWH KGW ++Q +  YMRR++ +  Y EI TP ++D+
Sbjct: 241 RDHRKLGKQLDLFHMQEESPGMVFWHPKGWALWQQVEQYMRRRVNEAGYLEIKTPMIMDR 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW +YR NMF       T  + R +A+KPMNCPGHV VF HGL+SYR+LP+R 
Sbjct: 301 SLWEASGHWQNYRENMFT------TESEKRDYAIKPMNCPGHVQVFKHGLRSYRDLPLRY 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNE SG+LHGLMRVRGF QDDAH+FCT+EQ   E +  + L +S+YKDFGFE 
Sbjct: 355 AEFGSCHRNEASGALHGLMRVRGFVQDDAHIFCTEEQFIAESIAFNTLAMSVYKDFGFEH 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I +KLS RPE+R G+D  WD AE  ++  L     S ++      L GEGAFYGPK EY 
Sbjct: 415 IDIKLSLRPEQRAGTDETWDRAEQGLRDALTACGLSWEE------LPGEGAFYGPKIEYH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+GR WQCGT+Q+D  LP R  A YV   + +  PVM+HRA+ GS+ERF+GI+IE+ 
Sbjct: 469 IKDALGRSWQCGTLQLDMVLPERLGAEYVAEDNSRRRPVMLHRAIVGSMERFLGILIEHH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G +P+WL+P+QA+V  I  S VEYAQ +A  L+   + +  D RNE I+YKIREH+++K
Sbjct: 529 AGAMPVWLAPVQAVVLNIAESQVEYAQSLAQTLQKQGVRVTADLRNEKISYKIREHTLEK 588

Query: 603 IPIIIICGDKEASERSIGIRRFGST 627
           +P +++ GDKE   +++ +R  G  
Sbjct: 589 VPYLLVVGDKERDAQTVAVRARGGV 613


>gi|171463692|ref|YP_001797805.1| threonyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           necessarius STIR1]
 gi|238689063|sp|B1XV14|SYT_POLNS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|171193230|gb|ACB44191.1| threonyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           necessarius STIR1]
          Length = 640

 Score =  684 bits (1764), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 319/623 (51%), Positives = 441/623 (70%), Gaps = 15/623 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS + F      +DVA+SI   LAK A+   ++GK+ D S  + ++  + IIT +
Sbjct: 4   VTLPDGSKREFEAPVRVADVAQSIGSGLAKAALGGIVDGKMVDTSFVIDKDSQLAIITDK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
            P +L ++RHS AH++A AV+ ++PE QV IGP+IE+GFYYDF   +PF+ D+L  +EKK
Sbjct: 64  SPEALEIVRHSTAHLLAYAVKELFPEAQVTIGPVIENGFYYDFSYHRPFTPDDLVALEKK 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M E+  RD P  +  +  ++A E F+ + E YK E++ SIP  E+V+LY +G++ DLCRG
Sbjct: 124 MTELAKRDEPVTRTVMPRDEAVEFFKKQGENYKAELIASIPQGEDVSLYAEGKFTDLCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV STG++K  FKLMK+AGAYWRGDS   ML RIYGT W  +++   YL+ LEESEKRD
Sbjct: 184 PHVPSTGKLK-VFKLMKLAGAYWRGDSKNEMLQRIYGTTWLRKEDQDAYLHMLEESEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHL 304
           HR+L +++DLFH  E+  G+IFWH KGW I+Q +  YMRR  + + Y+E+  PQ+LD+ L
Sbjct: 243 HRRLGKQLDLFHFQEEAPGLIFWHPKGWSIWQEVEQYMRRVYQQEGYQEVKAPQILDRGL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHW++Y+ NMF  +  +      R +ALKPMNCPGHV ++N GL SYRELP+R  E
Sbjct: 303 WEKSGHWENYKENMFTTESEN------RAYALKPMNCPGHVQIYNSGLHSYRELPLRFGE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FG  +RNEPSG+LHGLMRVRGFTQDD H+FCT++Q+ +E       + ++Y+DFGF ++ 
Sbjct: 357 FGQCHRNEPSGALHGLMRVRGFTQDDGHIFCTEDQIQSEVAAFDKAVRAVYQDFGFTEVA 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           VKL+ RP KRVG DA+WD AE  ++G L   K S Q+      L GEGAFYGPK EY LK
Sbjct: 417 VKLALRPAKRVGDDAIWDKAEEALRGAL---KASGQEWEE---LPGEGAFYGPKIEYHLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D+IGR WQCGTIQVDF++P+R  A YV  ++ +  PVM+HRA+ GS+ERFIGI+IEN  G
Sbjct: 471 DSIGRTWQCGTIQVDFSMPARLGAEYVAENNSRKTPVMLHRAIVGSLERFIGILIENHTG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
           N+P+WL+P QA+V  I+ ++  YAQ++  LLK     IE+D RNE I YKIRE++++K P
Sbjct: 531 NMPVWLAPTQAVVLNISGNSAAYAQQVQQLLKKQGFRIESDLRNEKITYKIREYALQKTP 590

Query: 605 IIIICGDKEASERSIGIRRFGST 627
            ++I GDKE+   ++ +R  G  
Sbjct: 591 FLLIVGDKESESNTVAVRARGGV 613


>gi|134295547|ref|YP_001119282.1| threonyl-tRNA synthetase [Burkholderia vietnamiensis G4]
 gi|166223329|sp|A4JDU4|SYT_BURVG RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|134138704|gb|ABO54447.1| Ser-tRNA(Thr) hydrolase [Burkholderia vietnamiensis G4]
          Length = 635

 Score =  684 bits (1764), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 315/625 (50%), Positives = 435/625 (69%), Gaps = 15/625 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           + +  PDGS++ +    T ++VA SI   LAK A+   ++G++ D S  + R+ S+ I+T
Sbjct: 2   VSIRLPDGSVRQYEHPVTVAEVAASIGPGLAKAALGGKLDGELVDTSTVIDRDASLAIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   L +IRHS AH++A AV+ ++PE QV IGP+I++GFYYDF   +PF+ ++L +IE
Sbjct: 62  DKDADGLDIIRHSTAHLLAYAVKELYPEAQVTIGPVIDNGFYYDFAYNRPFTPEDLEKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+MQE+  +D P  ++ +S ++A   F S  E YK EI+ESIP  + + LY  G + DLC
Sbjct: 122 KRMQELAKKDEPVTRRVVSRDEAAGYFRSIGEKYKAEIIESIPQSDEIKLYSHGGFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV STG++K  FKLMKVAGAYWRGDS    L RIYGTAW  +++  QYL+ LEE+EK
Sbjct: 182 RGPHVPSTGKLK-VFKLMKVAGAYWRGDSKNEQLQRIYGTAWTKKEDQDQYLHMLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ E+  G++FWH KGW ++Q +  YMRR++ D  Y EI TP ++D+
Sbjct: 241 RDHRKLGKQLDLFHMQEESPGMVFWHPKGWALWQQVEQYMRRRVNDAGYLEIKTPMIMDR 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW +YR NMF       T  + R +A+KPMNCPGHV VF HGL+SYR+LP+R 
Sbjct: 301 SLWEASGHWQNYRENMFT------TESEKRDYAIKPMNCPGHVQVFKHGLRSYRDLPLRY 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNE SG+LHGLMRVRGF QDDAH+FCT++Q   E +  + L +S+YKDFGFE 
Sbjct: 355 AEFGSCHRNEASGALHGLMRVRGFVQDDAHIFCTEDQFIAESIAFNTLAMSVYKDFGFEH 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I +KLS RPE+R G+D  WD AE  ++  L     + Q+      L GEGAFYGPK EY 
Sbjct: 415 IDIKLSLRPEQRAGTDETWDRAEQGLRDALTACGLTWQE------LPGEGAFYGPKIEYH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+GR WQCGT+Q+D  LP R  A YV   + +  PVM+HRA+ GS+ERF+GI+IE+ 
Sbjct: 469 IKDALGRSWQCGTLQLDMVLPERLGAEYVAEDNSRRRPVMLHRAIVGSMERFLGILIEHH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G +P+WL+P QAIV  I  S  EYAQ +A  L+   + +  D RNE I+YKIREH+++K
Sbjct: 529 AGAMPVWLAPFQAIVLNIAESQAEYAQSLAQTLQKQGVRVAADLRNEKISYKIREHTLEK 588

Query: 603 IPIIIICGDKEASERSIGIRRFGST 627
           +P +++ GDKE   +++ +R  G  
Sbjct: 589 VPYLLVVGDKERDAQTVAVRARGGV 613


>gi|161524952|ref|YP_001579964.1| threonyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|189350300|ref|YP_001945928.1| threonyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|238687005|sp|A9ABF9|SYT_BURM1 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|160342381|gb|ABX15467.1| threonyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|189334322|dbj|BAG43392.1| threonyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
          Length = 635

 Score =  683 bits (1763), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 313/625 (50%), Positives = 438/625 (70%), Gaps = 15/625 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           + +  PDGS++ +    T ++VA SI   LAK A+   ++G++ D S  +  + S+ I+T
Sbjct: 2   VSIRLPDGSVRQYEHPVTVAEVAASIGPGLAKAALGGKLDGELVDTSAVIDHDASLAIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +DP  L +IRHS AH++A AV+ ++P+ QV IGP+I++GFYYDF   +PF+ ++L +IE
Sbjct: 62  DKDPDGLDIIRHSTAHLLAYAVKELYPDAQVTIGPVIDNGFYYDFAYHRPFTPEDLEKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+MQE+  +D P  ++ +S ++A   F S  E YK EI+ESIP  + + LY  G + DLC
Sbjct: 122 KRMQELAKKDEPVTRRVVSRDEAAGYFRSIGEKYKAEIIESIPESDEIKLYSHGGFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV STG++K  FKLMKVAGAYWRGDS    L RIYGTAW  +++  QYL+ LEE+EK
Sbjct: 182 RGPHVPSTGKLK-VFKLMKVAGAYWRGDSKNEQLQRIYGTAWTKKEDQDQYLHMLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ E+  G++FWH KGW ++Q +  YMRR++ +  Y EI TP ++D+
Sbjct: 241 RDHRKLGKQLDLFHMQEESPGMVFWHPKGWALWQQVEQYMRRRVNEAGYLEIKTPMIMDR 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW +YR NMF       T  + R +A+KPMNCPGHV VF HGL+SYR+LP+R 
Sbjct: 301 SLWEASGHWQNYRENMFT------TESEKRDYAIKPMNCPGHVQVFKHGLRSYRDLPLRY 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNE SG+LHGLMRVRGF QDDAH+FCT+EQ+  E +  + L +S+Y+DFGF+ 
Sbjct: 355 AEFGSCHRNEASGALHGLMRVRGFVQDDAHIFCTEEQIIAESIAFNKLAMSVYRDFGFDH 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I +KLS RPE+R+GSD  WD AE  ++  L       ++      L GEGAFYGPK EY 
Sbjct: 415 IDIKLSLRPEQRMGSDETWDRAEQGLREALTACGLQWEE------LPGEGAFYGPKIEYH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+GR WQCGT+Q+D  LP R  A YV   + +  PVM+HRA+ GS+ERF+GI+IE+ 
Sbjct: 469 IKDALGRSWQCGTLQLDMMLPERLGAEYVAEDNSRRRPVMLHRAIVGSMERFLGILIEHH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G +P+WL+P+QA+V  I  S VEYAQ +A  L+   L +  D RNE I+YKIREH+++K
Sbjct: 529 AGAMPVWLAPVQAVVLNIAESQVEYAQSLAQTLQKQGLRVTADLRNEKISYKIREHTLEK 588

Query: 603 IPIIIICGDKEASERSIGIRRFGST 627
           +P +++ GDKE   +++ +R  G  
Sbjct: 589 VPYLLVVGDKERDAQTVAVRARGGV 613


>gi|221639813|ref|YP_002526075.1| threonyl-tRNA synthetase [Rhodobacter sphaeroides KD131]
 gi|254783534|sp|B9KKC7|SYT_RHOSK RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|221160594|gb|ACM01574.1| Threonyl-tRNA synthetase [Rhodobacter sphaeroides KD131]
          Length = 646

 Score =  683 bits (1763), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 320/650 (49%), Positives = 441/650 (67%), Gaps = 10/650 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           + I LTFPDG  + FP   T ++VA SIS SL KKA++ +++G+  DL  P+  +  I I
Sbjct: 2   AQISLTFPDGKAREFPAGITPAEVAASISTSLGKKAISASVDGRHYDLQWPIETDAKIAI 61

Query: 62  ITPED-PRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            T  D  ++L +IRH  AHIMA AVQ +WP+V+V IGP++ +G+YYDFD+++ F+ ++L 
Sbjct: 62  HTMADEAQALELIRHDLAHIMARAVQELWPDVKVTIGPVVANGWYYDFDRDETFTPEDLG 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEK+M+EII        +     +A   +E + E +KVE++++IP  +++ +Y  G W 
Sbjct: 122 AIEKRMKEIINAREAVKTELWERARAIAYYEERGEPFKVELVQAIPEDQSIRMYWHGGWQ 181

Query: 181 DLCRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           DLCRGPH++ TGQV    FKLM VAGAYWRGDS    L RIYG A+ T+ EL  YL+ LE
Sbjct: 182 DLCRGPHLQHTGQVPADAFKLMSVAGAYWRGDSANKQLQRIYGVAFKTRDELKAYLHMLE 241

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+ KRDHRKL REM+LFH+ E+  G++FWH  GW+I++TL  YMR +++   Y+EI TPQ
Sbjct: 242 EAAKRDHRKLGREMELFHLQEEAPGMVFWHPNGWQIYRTLEDYMRGRLRQAGYKEIRTPQ 301

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW+ SGHW++Y+ NMF V+  ++  K+ R  ALKPMNCP HV V+N GLKSYR+L
Sbjct: 302 VVDRKLWEASGHWEAYKENMFIVEVEEEHAKEKRINALKPMNCPCHVQVYNQGLKSYRDL 361

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFGS +R E SGS+HGLMRVRGF QDDAH+FCT++Q+ +EC     L+ S+YKD 
Sbjct: 362 PLRLAEFGSCHRYESSGSMHGLMRVRGFVQDDAHIFCTEDQIESECAAFIELLSSVYKDL 421

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+   +KLSTRPE R+GSD  WD  E  ++  +  +  + +      +  GEGAFYGPK
Sbjct: 422 GFDSFEIKLSTRPEVRIGSDEAWDKVETALENAIRKVGAAYE------IDPGEGAFYGPK 475

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++ L DAIGR WQCGT QVD NLP+R  A Y+     K  P M+HRA+ GS ERFIGI+
Sbjct: 476 LDFKLTDAIGRKWQCGTFQVDPNLPTRLGAEYIGEDGAKHRPYMLHRAILGSFERFIGIL 535

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IEN+ G LP WL+P Q +V +I S A  Y  E+   L++  +  E D RNE INYK+REH
Sbjct: 536 IENYAGKLPFWLAPRQVVVASIVSDADPYVAEVVAALRARGVRAEADTRNEKINYKVREH 595

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
           S+ K+P+I+  G +E   RS+ +RR G T T+ + L   +  L  ++  P
Sbjct: 596 SVGKVPVILAIGMQEVEARSVSVRRLGETRTESMGLDQVVDQLAADARIP 645


>gi|124267077|ref|YP_001021081.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Methylibium
           petroleiphilum PM1]
 gi|166225459|sp|A2SH07|SYT_METPP RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|124259852|gb|ABM94846.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Methylibium
           petroleiphilum PM1]
          Length = 635

 Score =  683 bits (1762), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 318/611 (52%), Positives = 430/611 (70%), Gaps = 15/611 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           I +T PDGS + FP   T ++VA SI   LAK A+   ++GK+ D    +  +  + I+T
Sbjct: 2   IVITLPDGSQREFPGPVTVAEVAASIGTGLAKAALGGRVDGKLVDTGHRIEGDARLAIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   L +IRHS AH++A AV+ ++PE QV IGP+IE+GFYYDF  ++PF+ ++LA IE
Sbjct: 62  DKDADGLDLIRHSTAHLLAYAVKELFPEAQVTIGPVIENGFYYDFSYKRPFTPEDLAAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            KM E+  +D    ++ L  ++A   F+S  E YK EI+  IPA ++V+LYR+G + DLC
Sbjct: 122 AKMTELAKKDEKVERRVLPRDEAVAYFKSIGEDYKAEIIAGIPAGQDVSLYREGRFEDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV STG+++ F KLMKVAGAYWRGD    ML RIYGTAW ++ EL QYL+ LEE+EK
Sbjct: 182 RGPHVPSTGKLRHF-KLMKVAGAYWRGDHRNEMLQRIYGTAWASKDELQQYLHMLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQ 302
           RDHRKL RE+DLFH+ E   G++FWH KGW ++Q +  YMR   +D+ Y E+  PQ+LDQ
Sbjct: 241 RDHRKLGRELDLFHLDEHAPGLVFWHPKGWTVWQQVEQYMRAVYRDNGYLEVKGPQILDQ 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+++GHWD YR NMF       T  + R +ALKPMNCPGH+ ++  G+KSYR+LP+R 
Sbjct: 301 GLWEKTGHWDKYRENMFV------TESEKRDYALKPMNCPGHILIYKQGIKSYRDLPLRY 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG  +RNEP+G LHG+MRVRGFTQDD H+FCT+E +  EC+    L+  +YKDFGF  
Sbjct: 355 GEFGQCHRNEPTGGLHGIMRVRGFTQDDGHIFCTEEHILPECVAYTALLQKVYKDFGFND 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+ K++TRPEKR+GSDA+WD AE+ +   +++++ S  + +   V  G+GAFYGPK EY 
Sbjct: 415 IIYKVATRPEKRIGSDAVWDKAEHAL---MESLRASGCEFV---VSPGDGAFYGPKIEYT 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LKDA+GR WQCGT+QVDF+LP R +A YV    E+  PVM+HRA+ GS+ERFIGI+IE  
Sbjct: 469 LKDALGRQWQCGTMQVDFSLPERLDAVYVAESGERLFPVMLHRAIVGSLERFIGILIEQH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G LP WL+P+Q +V  IT    +YA EIA  L+   +    D RNE I YKIREHS++K
Sbjct: 529 AGALPAWLAPVQVMVLNITDGQADYAAEIAKTLQKQGVRAGVDLRNEKITYKIREHSMQK 588

Query: 603 IPIIIICGDKE 613
           +P I++ GDKE
Sbjct: 589 LPYILVVGDKE 599


>gi|121594741|ref|YP_986637.1| threonyl-tRNA synthetase [Acidovorax sp. JS42]
 gi|166223314|sp|A1W8I6|SYT_ACISJ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|120606821|gb|ABM42561.1| Ser-tRNA(Thr) hydrolase [Acidovorax sp. JS42]
          Length = 639

 Score =  682 bits (1761), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 323/615 (52%), Positives = 432/615 (70%), Gaps = 19/615 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           I +T PDGS + F    T ++VA SI   LAK A+A  I  KV D S  + + S + I+T
Sbjct: 2   IHITLPDGSQREFAGPVTVAEVAASIGSGLAKAALAGKIGDKVVDTSYQITQDSPLSIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   L VIRHS AH++A AV+ ++P+ QV IGP+IE+GFYYDF  ++PF+ ++LA IE
Sbjct: 62  AKDADGLEVIRHSTAHLLAYAVKELFPDAQVTIGPVIENGFYYDFSYKRPFTPEDLAAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M E+ A+D P +++ L  ++A   F+   E YK EI+ SIP  E+V+LYR+G + DLC
Sbjct: 122 KRMAELAAKDEPVVRRVLPRDEAVAYFKGLGEHYKAEIIASIPTNEDVSLYREGGFEDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV STG++K FFKLMKVAGAYWRGD    ML RIYGTAW T++EL +YL+ LEE+EK
Sbjct: 182 RGPHVPSTGKLK-FFKLMKVAGAYWRGDHRNEMLQRIYGTAWATKEELQEYLHMLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQ 302
           RDHRKL RE+DLFHI E   G +FWH KGW ++Q +  YMRR  +D+ Y+E+  PQ+LD+
Sbjct: 241 RDHRKLGRELDLFHIDEHSPGTVFWHPKGWTLWQEVEQYMRRVYRDNGYQEVKGPQILDK 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+++GHWD YR NMF       T  + R +ALKPMNCPGH+ +F  G+KSYR+LP+R 
Sbjct: 301 TLWEKTGHWDKYRDNMFT------TESEKRDYALKPMNCPGHILIFKQGIKSYRDLPLRY 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG  +RNEP+G LHG+MRVRGFTQDD H+FCT++ +  EC     L+  +YKDFGF  
Sbjct: 355 GEFGQCHRNEPTGGLHGIMRVRGFTQDDGHIFCTEDHILAECTAYTALLQKVYKDFGFHN 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+ K++TRPE R+GSD  WD AE+ +   +++++ S        +  G+GAFYGPK EY 
Sbjct: 415 IIYKVATRPEARIGSDESWDKAEHAL---MESLRASG---CEFEIAPGDGAFYGPKIEYT 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LKDAIGR WQCGT+QVDF++P R +A YV     +  PVM+HRA+ GS+ERFIGI+IE  
Sbjct: 469 LKDAIGRQWQCGTMQVDFSMPERLDAEYVGEDGGRHRPVMLHRAIVGSLERFIGILIEEH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIA----NLLKSHHLSIETDFRNETINYKIREH 598
            G LP+WL+P+Q  V  IT +  +Y +EIA      L +  L + TD RNE I YKIREH
Sbjct: 529 AGALPVWLAPVQVAVLNITDAQQDYCREIAAKLQKALPNQGLRVVTDLRNEKITYKIREH 588

Query: 599 SIKKIPIIIICGDKE 613
           S++K+P I++ GDKE
Sbjct: 589 SLQKLPYILVAGDKE 603


>gi|157825427|ref|YP_001493147.1| threonyl-tRNA synthetase [Rickettsia akari str. Hartford]
 gi|166225491|sp|A8GML4|SYT_RICAH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|157799385|gb|ABV74639.1| threonyl-tRNA synthetase [Rickettsia akari str. Hartford]
          Length = 635

 Score =  682 bits (1761), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 324/643 (50%), Positives = 441/643 (68%), Gaps = 15/643 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           I ++FPDGS++ F    T  +VA +IS SLAK A+   ING++ DLS  +  +  + I+T
Sbjct: 2   INISFPDGSVRQFENDITAYEVANAISMSLAKAAMVAEINGELKDLSTVIENDCKLRILT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   L +IRH  AHI+AEA + ++P++QV IGP IE+GF+YDF K++PF+ D++A IE
Sbjct: 62  AKDSECLEIIRHDAAHIIAEAAKELFPDIQVTIGPAIENGFFYDFAKDKPFTPDDVAMIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M EI+ R+    ++  + +KA E F+S  E YK EI+ SIPA E +TLYRQG + DLC
Sbjct: 122 ARMHEIVKRNEQITRELWNRDKAIEFFKSIGEHYKAEIIASIPAGEQITLYRQGNFIDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH  STG VK F KLMKVAGAYWRGDS   ML RIYGTAW T+++L  YL  LEE+EK
Sbjct: 182 RGPHAPSTGFVKHF-KLMKVAGAYWRGDSRNEMLQRIYGTAWATKEQLDNYLLMLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQ 302
           RDHRKL +E+DLFH  E+  G++FWH KGW I+ T+  Y+R+KI K+ Y E+ TP ++D+
Sbjct: 241 RDHRKLGKELDLFHFQEEAQGMVFWHDKGWSIYNTIEQYIRKKIRKNGYTEVKTPVLVDK 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW+ +R +MFA+   D      +T ALKPMNCP HV +F  G+KSYR+LP+R+
Sbjct: 301 SLWEASGHWEKFRDDMFALDTDD------KTLALKPMNCPCHVQIFKQGIKSYRDLPLRM 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           +EFG  +RNE SG+LHGLMRVR   QDDAH+FCT+EQ+ +E +    L+  +YKDFGF  
Sbjct: 355 SEFGLCHRNEASGALHGLMRVRSLVQDDAHIFCTEEQITDETVSFCKLLTEVYKDFGFTN 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I VK S RPE R GS+  WD AEN +K  ++  K      +N G    EGAFYGPK E++
Sbjct: 415 ISVKFSDRPEVRAGSNGTWDKAENALKEAVE--KAGFTYTLNPG----EGAFYGPKLEFV 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L DAIGR WQCGT+Q+DF LP R +A Y+ +  EK  PVM+HRA+ GS+ERFIGI+IE +
Sbjct: 469 LTDAIGRQWQCGTLQMDFVLPERLDASYIAASGEKKRPVMLHRAILGSLERFIGILIEEY 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  PLWL+PIQ  + TITS   +YA E+   L  + +  + +   + INYKIRE   +K
Sbjct: 529 AGCFPLWLAPIQVAIATITSDLNDYALEVQKALIDNGVRTDINISPDKINYKIREFYNQK 588

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           IP+I + G +E   + + IRR  +T  + +SL   I ++ +E+
Sbjct: 589 IPMIAVIGKQEQENKQVTIRRLRTTEQEVLSLEQLITLIKEEN 631


>gi|114767278|ref|ZP_01446118.1| threonyl-tRNA synthetase [Pelagibaca bermudensis HTCC2601]
 gi|114540584|gb|EAU43657.1| threonyl-tRNA synthetase [Roseovarius sp. HTCC2601]
          Length = 649

 Score =  682 bits (1760), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 327/653 (50%), Positives = 438/653 (67%), Gaps = 10/653 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
           + I LTFPDG+ + +    T + VAESIS+SL+KKA++  ++G+  DL  P+ ++  I I
Sbjct: 2   AQISLTFPDGNKREYEQGVTPAAVAESISKSLSKKAISAMVDGQHWDLQWPIEQDAQIAI 61

Query: 62  ITPEDPR-SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            T +D   +L +IRH  AH+MA AVQ IWP+ +V IGP+ E G++YDFD+ +PF+ ++L 
Sbjct: 62  NTLQDEAPALELIRHDLAHVMARAVQEIWPDTKVTIGPVTEHGWFYDFDRAEPFTPEDLG 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           QIE KM++II    P   +    ++AR  +E   E YKVE+++ IP    + +Y  G W 
Sbjct: 122 QIEAKMKDIINAREPVTTEIWERDRARAFYEENGEPYKVELVDRIPEGAPIRMYWHGGWQ 181

Query: 181 DLCRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           DLCRGPH++ TGQ+    FKLM V+GAYW GD NRPML R+ G A+  +++L  YL FLE
Sbjct: 182 DLCRGPHLQHTGQLPADSFKLMGVSGAYWFGDVNRPMLQRVQGVAFRNRKDLQGYLNFLE 241

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+ KRDHRKL REMDLFH+  +  G IFWH  GW I+ +L  YMRR+  +D Y E+NTPQ
Sbjct: 242 EAAKRDHRKLGREMDLFHLQPEAPGQIFWHPNGWTIYTSLQDYMRRQQHRDGYVEVNTPQ 301

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW+ SGHWD+Y+ NMF V+  ++  ++    ALKPMNCP HV +FN GLKSYR+L
Sbjct: 302 VVDRKLWEASGHWDNYQENMFIVEVDEEHAREKSINALKPMNCPCHVQIFNSGLKSYRDL 361

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFGS  R EPSG+LHG+MRVRGFTQDDAH+FCT +Q+  E  K    +  IY D 
Sbjct: 362 PLRMAEFGSCNRYEPSGALHGIMRVRGFTQDDAHIFCTDDQIEAETKKFIEFLAGIYADL 421

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF    +KLSTRPEKR+GS+  WD  E  +    D  K +        +  GEGAFYGPK
Sbjct: 422 GFHNWTIKLSTRPEKRIGSEESWDRVEAALG---DACKAAG---YGFELQEGEGAFYGPK 475

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ L DAIGR+WQCGT+QVD NLP R +A Y+    EK  PVM+HRAV GS ERFIGI+
Sbjct: 476 LEFTLTDAIGREWQCGTLQVDPNLPDRLDASYIGQDGEKHRPVMLHRAVLGSFERFIGIL 535

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE   G LP WL+P Q +V +ITS A +Y  E+   LK+  +  E D RNE INYK+REH
Sbjct: 536 IEEHAGKLPFWLAPRQVVVASITSEADDYVHEVVAELKAAGVRAEADIRNEKINYKVREH 595

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           S+ K+P+I+  G +E  ER++ +RR G   T+  +L +    L  E+ PPD +
Sbjct: 596 SVGKVPVILAVGHREVEERTVTVRRLGEKQTKVAALAEITQELGVEATPPDLR 648


>gi|16124719|ref|NP_419283.1| threonyl-tRNA synthetase [Caulobacter crescentus CB15]
 gi|221233433|ref|YP_002515869.1| threonyl-tRNA synthetase [Caulobacter crescentus NA1000]
 gi|22654137|sp|Q9AAX8|SYT_CAUCR RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|254783515|sp|B8GZS7|SYT_CAUCN RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|13421637|gb|AAK22451.1| threonyl-tRNA synthetase [Caulobacter crescentus CB15]
 gi|220962605|gb|ACL93961.1| threonyl-tRNA synthetase [Caulobacter crescentus NA1000]
          Length = 655

 Score =  682 bits (1760), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 322/655 (49%), Positives = 433/655 (66%), Gaps = 18/655 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR------EGS 58
           I L FPDGS + +P  ATG DVA +IS+SL KKA+ + ++G+V DL   +       E  
Sbjct: 2   IDLVFPDGSSRQYPDGATGRDVAAAISKSLEKKALLIKLDGQVLDLDRRLTPDLLTGERK 61

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
            EI+T E P +L  IRH  AH++AEAVQ ++P  QV IGP +EDGFYYDF +++PFS D+
Sbjct: 62  FEILTREAPEALDTIRHDTAHVLAEAVQELFPGTQVTIGPNVEDGFYYDFARDEPFSLDD 121

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L +IEK+M+EI+ RD    ++     +A   F+   E YK +I+  +P  + +T+YRQG 
Sbjct: 122 LEKIEKRMKEIVDRDEKITREVWDRNEAIAHFDGIGEQYKAQIIRDLPDTDTITVYRQGN 181

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           W DLCRGPH+ ST  V K FKL K+AGAYWRGD N   L RIYGTAW ++ +L  +L  +
Sbjct: 182 WKDLCRGPHLPSTKHVGKAFKLTKLAGAYWRGDQNNAQLQRIYGTAWASEADLEAHLKRI 241

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
           EE+EKRDHRKL + MDLFHI E+G G++FWH KGW +++ L  YMRR++    Y+E+ TP
Sbjct: 242 EEAEKRDHRKLGKTMDLFHIQEEGKGMVFWHPKGWALYRVLEDYMRRRLDAAGYKEVKTP 301

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           Q+LD+ LW++SGH + +   MF  + A+  +      A+KPMNCPGH+ +FN G KSYRE
Sbjct: 302 QILDRSLWEKSGHAEKFGHAMFMCESAEGEV-----LAVKPMNCPGHIQIFNVGQKSYRE 356

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFG+ +R EPSG++HG+MRVR FTQDDAH+FC +EQ+  E  +   L+ S+Y D
Sbjct: 357 LPLRMAEFGACHRYEPSGAMHGIMRVRAFTQDDAHIFCREEQVTEESARFIELLRSVYND 416

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
            G      K STRPE R G+D  WD      K        +        +  GEGAFYGP
Sbjct: 417 LGMTLADTKFSTRPELRAGTDETWD------KAEAALAAAAEAAGETLTLQPGEGAFYGP 470

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ LKDAIGR WQCGT+Q+DF LP R +A YV+    K  PVM+HRA+ GS ERFIGI
Sbjct: 471 KLEFSLKDAIGRVWQCGTLQLDFVLPERLDAEYVSEDGSKKRPVMLHRAILGSFERFIGI 530

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           ++ENF G LP+WL+P Q +V TITS A +YA+E+   L    +  E D RNE INYKIRE
Sbjct: 531 LLENFAGALPVWLAPTQVVVATITSDADDYAREVVEKLTKLGMRAELDLRNEKINYKIRE 590

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           HS+ K+P+I + G KEA    + +RR G      +SL +A+ +L  ++ PPD  +
Sbjct: 591 HSLAKVPVIAVVGRKEAETGQLALRRLGGEGQSVLSLEEALRVLKSDATPPDVAR 645


>gi|113867357|ref|YP_725846.1| threonyl-tRNA synthetase [Ralstonia eutropha H16]
 gi|123134164|sp|Q0KBZ3|SYT_RALEH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|113526133|emb|CAJ92478.1| Threonyl-tRNA synthetase [Ralstonia eutropha H16]
          Length = 635

 Score =  682 bits (1760), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 319/625 (51%), Positives = 439/625 (70%), Gaps = 15/625 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I +T PDGS + FP   T ++VA+ I   LAK A+A  ++G++ D S  + R+  + I+T
Sbjct: 2   IAITLPDGSRREFPGPVTVAEVAQGIGAGLAKAALAGKVDGQLVDTSYRIDRDAELAIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   + VIRHS AH++A AV+ ++PE QV IGP+IE+GFYYDF  ++PF+ ++LA IE
Sbjct: 62  DKDADGVDVIRHSTAHLLAYAVKELYPEAQVTIGPVIENGFYYDFAYKRPFTPEDLAAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           KKM E+  +D   +++  + ++A  LFES  E YK EI+ SIPA + + LYR+G + DLC
Sbjct: 122 KKMTELARKDEKVVREVWNRDEAVALFESMGEKYKAEIIASIPADQEIGLYREGSFVDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV STG++K  FKLMKVAGAYWRGD+N  ML RIYGTAW  +++   YL+ LEE+EK
Sbjct: 182 RGPHVPSTGKLK-VFKLMKVAGAYWRGDANNEMLQRIYGTAWARKEDQEAYLHMLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL + +DLFH+ E+  G++FWH KGW+++Q +  YMR ++ D  Y+E+ TPQV+D+
Sbjct: 241 RDHRKLGKTLDLFHLQEEAPGMVFWHPKGWQVWQAVEQYMRGRLTDAGYDEVRTPQVMDR 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHW +Y+ NMF       T  + R +A+KPMNCPGHV +FNHGL+SYR+LP+RL
Sbjct: 301 SLWEKSGHWQNYKENMFV------TESEKRDYAIKPMNCPGHVQIFNHGLRSYRDLPLRL 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFG+ +RNEPSG+LHGLMRVRGF QDDAH+FCT+EQ+  E    + L  S+Y DFGF+ 
Sbjct: 355 AEFGACHRNEPSGALHGLMRVRGFVQDDAHIFCTEEQIVAEAKAFNELAFSVYDDFGFKD 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + VKLS RP++R GSD +WD AE  ++  L          ++   L GEGAFYGPK EY 
Sbjct: 415 VKVKLSLRPDQRAGSDEIWDHAEEGLRLALRACG------VDWEELPGEGAFYGPKVEYH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDAIGR WQCGT+Q+D  LP R +A YV+  + +  PVM+HRA+ GS ERF+GI++EN 
Sbjct: 469 IKDAIGRSWQCGTLQLDLVLPERLDAEYVSEDNSRKRPVMLHRAILGSFERFLGILLENH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G LP WL+P Q +V  I  S  EYA+ +  LL+      + D RNE I YKIREHS++K
Sbjct: 529 AGALPAWLAPEQVVVMNIADSQAEYAESVVQLLQKQGFRAKADLRNEKITYKIREHSLQK 588

Query: 603 IPIIIICGDKEASERSIGIRRFGST 627
           +P +++ GDKE     + +R  G+ 
Sbjct: 589 VPYLLVVGDKERDASQVAVRARGNV 613


>gi|222110646|ref|YP_002552910.1| threonyl-tRNA synthetase [Acidovorax ebreus TPSY]
 gi|254783520|sp|B9MHX8|SYT_DIAST RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|221730090|gb|ACM32910.1| threonyl-tRNA synthetase [Acidovorax ebreus TPSY]
          Length = 639

 Score =  682 bits (1759), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 322/615 (52%), Positives = 432/615 (70%), Gaps = 19/615 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           I +T PDGS + F    T ++VA SI   LAK A+A  I  KV D S  + + S + I+T
Sbjct: 2   IHITLPDGSQREFAGPVTVAEVAASIGSGLAKAALAGKIGDKVVDTSYQITQDSPLSIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   L VIRHS AH++A AV+ ++P+ QV IGP+IE+GFYYDF  ++PF+ ++LA IE
Sbjct: 62  AKDADGLEVIRHSTAHLLAYAVKELFPDAQVTIGPVIENGFYYDFSYKRPFTPEDLAAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M E+ A+D P +++ L  ++A   F+   E YK EI+ SIP  E+V+LYR+G + DLC
Sbjct: 122 KRMAELAAKDEPVVRRVLPRDEAVAYFKGLGEHYKAEIIASIPTNEDVSLYREGGFEDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV STG++K FFKLMKVAGAYWRGD    ML R+YGTAW T++EL QYL+ LEE+EK
Sbjct: 182 RGPHVPSTGKLK-FFKLMKVAGAYWRGDHRNEMLQRVYGTAWATKEELQQYLHMLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQ 302
           RDHRKL RE+DLFHI E   G +FWH KGW ++Q +  YMRR  +D+ Y+E+  PQ+LD+
Sbjct: 241 RDHRKLGRELDLFHIDEHSPGTVFWHPKGWTLWQEVEQYMRRVYRDNGYQEVKGPQILDK 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+++GHWD YR NMF       T  + R +ALKPMNCPGH+ +F  G+KSYR+LP+R 
Sbjct: 301 TLWEKTGHWDKYRDNMFT------TESEKRDYALKPMNCPGHILIFKQGIKSYRDLPLRY 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG  +RNEP+G LHG+MRVRGFTQDD H+FCT++ +  EC     L+  +YK+FGF  
Sbjct: 355 GEFGQCHRNEPTGGLHGIMRVRGFTQDDGHIFCTEDHILAECTAYTALLQKVYKNFGFHN 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+ K++TRPE R+GSD  WD AE+ +   +++++ S        +  G+GAFYGPK EY 
Sbjct: 415 IIYKVATRPEARIGSDESWDKAEHAL---MESLRASG---CEFEIAPGDGAFYGPKIEYT 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LKDAIGR WQCGT+QVDF++P R +A YV     +  PVM+HRA+ GS+ERFIGI+IE  
Sbjct: 469 LKDAIGRQWQCGTMQVDFSMPERLDAEYVGEDGGRHRPVMLHRAIVGSLERFIGILIEEH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIA----NLLKSHHLSIETDFRNETINYKIREH 598
            G LP+WL+P+Q  V  IT +  +Y +EIA      L +  L + TD RNE I YKIREH
Sbjct: 529 AGALPVWLAPVQVAVLNITDAQQDYCREIAAKLQKALPNQGLRVVTDLRNEKITYKIREH 588

Query: 599 SIKKIPIIIICGDKE 613
           S++K+P I++ GDKE
Sbjct: 589 SLQKLPYILVAGDKE 603


>gi|254252558|ref|ZP_04945876.1| Threonyl-tRNA synthetase [Burkholderia dolosa AUO158]
 gi|124895167|gb|EAY69047.1| Threonyl-tRNA synthetase [Burkholderia dolosa AUO158]
          Length = 635

 Score =  682 bits (1759), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 314/625 (50%), Positives = 435/625 (69%), Gaps = 15/625 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           + +  PDGS++ +    T ++VA SI   LAK A+   ++G++ D S  +  + S+ I+T
Sbjct: 2   VSIRLPDGSVRQYEHPVTVAEVAASIGPGLAKAALGGKLDGELVDTSTVIDHDASLAIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   L +IRHS AH++A AV+ ++P+ QV IGP+I++GFYYDF   +PF+ ++L +IE
Sbjct: 62  DKDADGLDIIRHSTAHLLAYAVKELYPDAQVTIGPVIDNGFYYDFAYHRPFTPEDLEKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+MQE+  +D P  ++ +S ++A   F S  E YK EI+ESIP  + + LY  G + DLC
Sbjct: 122 KRMQELAKKDEPVARRVVSRDEAAGYFRSIGEKYKAEIIESIPESDEIKLYSHGGFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV STG++K  FKLMKVAGAYWRGDS    L RIYGTAW  +++  QYL+ LEE+EK
Sbjct: 182 RGPHVPSTGKLK-VFKLMKVAGAYWRGDSKNEQLQRIYGTAWTKKEDQDQYLHMLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ E+  G++FWH KGW ++Q +  YMRR++ D  Y EI TP ++D+
Sbjct: 241 RDHRKLGKQLDLFHMQEESPGMVFWHPKGWALWQQVEQYMRRRVNDAGYLEIKTPMIMDR 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW +YR NMF       T  + R +A+KPMNCPGHV VF HGL+SYR+LP+R 
Sbjct: 301 SLWEASGHWQNYRENMFT------TESEKRDYAIKPMNCPGHVQVFKHGLRSYRDLPLRY 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNE SG+LHGLMRVRGF QDDAH+FCT+EQ   E +  + L +S+YKDFGFE 
Sbjct: 355 AEFGSCHRNEASGALHGLMRVRGFVQDDAHIFCTEEQFIAESIAFNTLAMSVYKDFGFEH 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I +KLS RPE+R G+D  WD AE  ++  L     S ++      L GEGAFYGPK EY 
Sbjct: 415 IDIKLSLRPEQRAGTDETWDRAEQGLRDALTACGLSWEE------LPGEGAFYGPKIEYH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+GR WQCGT+Q+D  LP R  A YV   + +  PVM+HRA+ GS+ERF+GI+IE+ 
Sbjct: 469 IKDALGRSWQCGTLQLDMVLPERLGAEYVAEDNSRRRPVMLHRAIVGSMERFLGILIEHH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G +P+WL+PIQA+V  I  S  EYAQ +A  L+   + +  D RNE I+YKIREH+++K
Sbjct: 529 AGAMPVWLAPIQAVVLNIAESQAEYAQSLAQTLQKQGVRVTADLRNEKISYKIREHTLEK 588

Query: 603 IPIIIICGDKEASERSIGIRRFGST 627
           +P +++ GDKE   +++ +R  G  
Sbjct: 589 VPYLLVVGDKERDAQTVAVRARGGV 613


>gi|254441196|ref|ZP_05054689.1| threonyl-tRNA synthetase [Octadecabacter antarcticus 307]
 gi|198251274|gb|EDY75589.1| threonyl-tRNA synthetase [Octadecabacter antarcticus 307]
          Length = 649

 Score =  681 bits (1758), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 324/653 (49%), Positives = 440/653 (67%), Gaps = 10/653 (1%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSI 59
           M   I LTFPDG+ + +    T +DVA SI+ SLAKKA++  +NG+  D++ P+ +  +I
Sbjct: 1   MAQQISLTFPDGNARQYDAGVTPADVAASIASSLAKKAISATVNGEHWDMAWPINDDAAI 60

Query: 60  EIITPEDPR-SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
            I T +D   ++ +IRH  AHIMA AVQ +WP+ QV IGP+I+DG+YYDFD+++ F+ D+
Sbjct: 61  AINTMKDAAPAVELIRHDLAHIMARAVQELWPDTQVTIGPVIKDGWYYDFDRKEAFTPDD 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L  IEKKM+EII +      +    E A + +E + E YK+E++  IP  E + +Y  G+
Sbjct: 121 LGTIEKKMKEIINKRDAVRTEVWDREVAIKYYEDRGEPYKIELINGIPGDEPLRMYWHGD 180

Query: 179 WFDLCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           W DLCRGPH+++TGQV    +KLM +AGAYWRGDS+R ML RIYG A+  +++L  +L+ 
Sbjct: 181 WQDLCRGPHLQNTGQVPGDSWKLMSIAGAYWRGDSDRTMLQRIYGVAFQNKEQLKAHLHM 240

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINT 296
           LEE+ KRDHRKL REM+LFH+ E+ SG IFWH  GW IF  L  YMRRK +   Y E+NT
Sbjct: 241 LEEAAKRDHRKLGREMNLFHMQEEASGQIFWHPNGWLIFTQLQDYMRRKQRAGGYVEVNT 300

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           PQV+D+ LW+QSGHW+ ++ +MF V+  ++  ++    ALKPMNCP HV ++N GLKSYR
Sbjct: 301 PQVVDRKLWEQSGHWEKFQEHMFIVEVDEEHAREKAVNALKPMNCPCHVQIYNQGLKSYR 360

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +LPVR+AEFGS  R EPSG+LHG+MRVRGFTQDD H+FCT+EQ+  E +    L+  +Y+
Sbjct: 361 DLPVRMAEFGSCNRYEPSGALHGIMRVRGFTQDDGHIFCTEEQIEVETIAFIALLSEVYQ 420

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           D GF    VK S RP+ R GSD +WD      K     +  +    I   +  GEGAFYG
Sbjct: 421 DLGFSDFKVKFSDRPDVRSGSDEVWD------KAEAALLAATRAAGIEPTLNPGEGAFYG 474

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK E++L DAIGRDWQCGT QVDF LP R +A Y+ S  EK  PVM+HRA+ GS ERFIG
Sbjct: 475 PKLEFVLTDAIGRDWQCGTHQVDFVLPERLDANYIGSDGEKHRPVMLHRALLGSFERFIG 534

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           I+IE   G LP WL+P Q +V +I S A +Y +E+   L +  +  E D RNE INYK+R
Sbjct: 535 ILIEEHAGKLPFWLAPRQVVVASIISDADDYVREVVAALNAKGVRAEADIRNEKINYKVR 594

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPD 649
           EHS+ K+P+I+ CG +E  +R++ +RR G   T   +L   +  L   + PPD
Sbjct: 595 EHSLGKVPVILACGAREVEDRTVSVRRLGEKQTSVTTLAAIVDDLQVSATPPD 647


>gi|307822740|ref|ZP_07652971.1| threonyl-tRNA synthetase [Methylobacter tundripaludum SV96]
 gi|307736344|gb|EFO07190.1| threonyl-tRNA synthetase [Methylobacter tundripaludum SV96]
          Length = 635

 Score =  681 bits (1757), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 321/636 (50%), Positives = 448/636 (70%), Gaps = 21/636 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS + +    T  DVA SI   LAK  +A  +NG + D S P+ ++ ++++IT +
Sbjct: 4   ITLPDGSKREYEQTVTVMDVALSIGSGLAKATLAGKVNGTLVDASTPIDQDATLQLITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   + VIRHS AH++A+AV+ ++P  QV IGP+IE+GF+YDF  E+PF+ ++L+ IEKK
Sbjct: 64  DEDGITVIRHSTAHLLAQAVKQLFPSAQVTIGPVIENGFFYDFAYERPFTPEDLSAIEKK 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M++++A D P  +  LS ++A + F    EAYK EI+ESIPA E+++LY QG + DLCRG
Sbjct: 124 MEQLVAEDYPIHRSVLSRDEAVKFFRDLGEAYKAEIIESIPANEDLSLYEQGGFTDLCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV ST ++K  FKLMK+AGAYWRG+S+  ML RIYGTAW  +++L  YL+ LEE+EKRD
Sbjct: 184 PHVPSTSKLK-VFKLMKIAGAYWRGNSDNEMLQRIYGTAWGDKKDLQAYLHRLEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHL 304
           HRKLA+ +DLFH  E+  G++FWH KGW I+Q +  Y+R K++ + Y E+ TPQV+D+ L
Sbjct: 243 HRKLAKTLDLFHSQEEAPGMVFWHEKGWVIYQQVEQYIREKLRVNGYGEVKTPQVVDRSL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHW+ +   +F     +      R +A+KPMNCP HV ++N GLKSYR+LP+RLAE
Sbjct: 303 WERSGHWEKFGDMIFTTHSEN------RDYAIKPMNCPCHVQIYNQGLKSYRDLPIRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNEPSG+LHGLMRVR F QDDAH+FCT+ Q+ +E     +++  +YKDFGFE+++
Sbjct: 357 FGSCHRNEPSGTLHGLMRVRNFVQDDAHIFCTEGQIQDEVSTFIDMLFDVYKDFGFEEVI 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +KLSTRP  RVG D++WD AEN ++  L+T K    D     +  GEGAFYGPK E+ LK
Sbjct: 417 IKLSTRPANRVGDDSVWDKAENALELALNT-KGLKWD-----LQPGEGAFYGPKIEFSLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D IGR WQCGTIQVDF++P R +A Y+     +  PVM+HRA+ GS+ERFIGI+IE   G
Sbjct: 471 DCIGRVWQCGTIQVDFSMPGRLDATYIAEDGSRQVPVMLHRAILGSLERFIGILIEQHAG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             PLWLSP+Q +V  IT    EYA +I   L+   + ++ D RNE I +KIREHS++++P
Sbjct: 531 TFPLWLSPVQVVVLNITDRHAEYAAQIMLDLEKQGIRVKIDLRNEKIGFKIREHSMQRVP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
            ++I GDKE  ++SI +R      TQK   L ++ I
Sbjct: 591 YLVIIGDKELEQQSITVR------TQKGDDLGSLSI 620


>gi|194289383|ref|YP_002005290.1| threonyl-tRNA synthetase [Cupriavidus taiwanensis LMG 19424]
 gi|238692758|sp|B3R4J1|SYT_CUPTR RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|193223218|emb|CAQ69223.1| threonine tRNA synthetase [Cupriavidus taiwanensis LMG 19424]
          Length = 635

 Score =  681 bits (1757), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 319/625 (51%), Positives = 438/625 (70%), Gaps = 15/625 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I +T PDGS + FP   T ++VA+SI   LAK A+A  ++G++ D S  + R+  + I+T
Sbjct: 2   IAITLPDGSRREFPGPVTVAEVAQSIGAGLAKAALAGKVDGQLVDTSYKIERDAELAIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   + VIRHS AH++A AV+ ++P+ QV IGP+IE+GFYYDF  ++PF+ ++LA IE
Sbjct: 62  DKDADGVDVIRHSTAHLLAYAVKELYPDAQVTIGPVIENGFYYDFAYKRPFTPEDLAAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           KKM E+  +D    ++  + ++A  LFES  E YK EI+ SIPA + + LYR+G + DLC
Sbjct: 122 KKMTELARKDEKVTREVWNRDEAVALFESMGEKYKAEIIGSIPADQEIGLYREGNFVDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV STG++K  FKLMKVAGAYWRGD+N  ML RIYGTAW  +++   YL+ LEE+EK
Sbjct: 182 RGPHVPSTGKLK-VFKLMKVAGAYWRGDANNEMLQRIYGTAWAKKEDQEAYLHMLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL + +DLFH+ E+  G++FWH KGW+++Q +  YMR ++ D  Y+E+ TPQV+D+
Sbjct: 241 RDHRKLGKTLDLFHLQEEAPGMVFWHPKGWQVWQAVEQYMRGRLTDAGYDEVRTPQVMDR 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHW +Y+ NMF       T  + R +A+KPMNCPGHV +FNHGL+SYR+LP+RL
Sbjct: 301 SLWEKSGHWQNYKENMFV------TESEKRDYAIKPMNCPGHVQIFNHGLRSYRDLPLRL 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFG+ +RNEPSG+LHGLMRVRGF QDDAH+FCT+EQ+  E    + L  S+Y DFGF+ 
Sbjct: 355 AEFGACHRNEPSGALHGLMRVRGFVQDDAHIFCTEEQIVAEAKAFNELAFSVYDDFGFKD 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + VKLS RP++R GSD +WD AE  ++  L       ++      L GEGAFYGPK EY 
Sbjct: 415 VKVKLSLRPDQRAGSDEIWDHAEEGLRLALRACGVEWEE------LPGEGAFYGPKVEYH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDAIGR WQCGT+Q+D  LP R  A YV+  + +  PVM+HRA+ GS ERF+GI++EN 
Sbjct: 469 IKDAIGRSWQCGTLQLDLVLPERLGAEYVSEDNSRKRPVMLHRAILGSFERFLGILLENH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G LP WL+P Q +V  I  S  EYA+ +  LL+      + D RNE I YKIREHS++K
Sbjct: 529 AGALPAWLAPDQVVVMNIADSQAEYAESVVQLLQKQGFRAKADLRNEKITYKIREHSLQK 588

Query: 603 IPIIIICGDKEASERSIGIRRFGST 627
           +P +++ GDKE     + +R  G+ 
Sbjct: 589 VPYLLVVGDKERDANQVAVRARGNV 613


>gi|91205350|ref|YP_537705.1| threonyl-tRNA synthetase [Rickettsia bellii RML369-C]
 gi|122990926|sp|Q1RJ48|SYT_RICBR RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|91068894|gb|ABE04616.1| Threonyl-tRNA synthetase [Rickettsia bellii RML369-C]
          Length = 635

 Score =  681 bits (1756), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 323/643 (50%), Positives = 440/643 (68%), Gaps = 15/643 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I ++FPDGS+K F  + T  ++A  IS SLAK A+   ING + DLS  +  +  + I+T
Sbjct: 2   INISFPDGSVKQFEKNITAFEIAVVISTSLAKAAMIAEINGDLKDLSTQIDNDCRLRILT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +DP  L VIRH  AH+ AEAV+ ++PE QV IGP IE+G+YYDF +++PF++D+LA IE
Sbjct: 62  AKDPECLEVIRHDAAHLTAEAVKELFPETQVTIGPAIENGYYYDFARDKPFTTDDLAVIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            KM E+  ++    ++    EKA E F+S  E YK EI+ SIP+ E ++LYRQG + DLC
Sbjct: 122 AKMHELAKKNEKVTRELWDREKAVEFFKSIGEHYKAEIIASIPSNEPISLYRQGNFIDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH  STG VK F KLMKVAGAYWRGDS   +L RIYGTAW T+++L  YL+ LEE+EK
Sbjct: 182 RGPHAPSTGFVKHF-KLMKVAGAYWRGDSRNEVLQRIYGTAWATKEQLESYLFMLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQ 302
           RDHRKL +E+DLFH  E+  G++FWH KGW ++ T+  Y+RRKI K+ Y E+ TP ++D+
Sbjct: 241 RDHRKLGKELDLFHFQEEAQGMVFWHDKGWSVYNTIEQYIRRKIRKNGYIEVKTPVLVDK 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW+ +R +MFA++  D      +T ALKPMNCP HV +F  G+KSYR+LP+R+
Sbjct: 301 SLWELSGHWEKFRDDMFALETDD------KTLALKPMNCPCHVQIFKQGIKSYRDLPLRM 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           +EFG  +RNE SG+LHGLMRVR   QDDAH+FC +EQ+ +E +    L+  +YKDFGF  
Sbjct: 355 SEFGLCHRNEASGALHGLMRVRSLVQDDAHIFCAEEQITDETVSFCKLLTEVYKDFGFTD 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I VK S RPE R GS   WD AEN +K  ++  K      +N G    EGAFYGPK E++
Sbjct: 415 IKVKFSDRPEVRAGSSETWDKAENALKEAVE--KAGYSYTLNPG----EGAFYGPKLEFV 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L DAIGR WQCGT+Q+DF LP R +A YV +  EK  PVM+HRA+ GS+ERFIGI+IE +
Sbjct: 469 LTDAIGRQWQCGTLQMDFVLPERLDASYVAASGEKKRPVMLHRAILGSLERFIGILIEEY 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  PLWL+P+Q  + TITS   +YA E+   L    + ++ +   + INYKIRE S +K
Sbjct: 529 AGRFPLWLAPVQVAIATITSDLNDYALEVQKALIESGVRVDINISPDKINYKIREFSNQK 588

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           +P+I + G +E   + + IRR G+T  + +S+   I  + +E+
Sbjct: 589 VPMIAVIGKQEKENKQVTIRRLGTTEQEVLSIEQLIEYIREEN 631


>gi|110679173|ref|YP_682180.1| threonyl-tRNA synthetase [Roseobacter denitrificans OCh 114]
 gi|123362019|sp|Q168U9|SYT_ROSDO RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|109455289|gb|ABG31494.1| threonyl-tRNA synthetase [Roseobacter denitrificans OCh 114]
          Length = 648

 Score =  681 bits (1756), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 327/652 (50%), Positives = 435/652 (66%), Gaps = 12/652 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           + I LTFPDGS + F    T  DVA SIS SL KKA++  + G   DL+ P+  + +I I
Sbjct: 2   AQISLTFPDGSTREFDAGVTAGDVAASISTSLRKKAISATVGGAHYDLAWPIHADATIAI 61

Query: 62  ITPEDP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            T +D  ++  ++RH  AHIMA AVQ IWPE +V IGP+I+DG+YYDFD+ + FS ++L 
Sbjct: 62  HTMQDEEQANELVRHDLAHIMARAVQEIWPETKVTIGPVIKDGWYYDFDRAEAFSPEDLG 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEKKM+EII +  P   +     +A   +E+  E YKVE++ +IP  E + +Y  G+W 
Sbjct: 122 LIEKKMKEIINKRDPVRTEVWDRARAIAHYEANDEPYKVELINAIPGDEPLRMYWHGDWQ 181

Query: 181 DLCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           DLCRGPH++ TGQV    FKLM +AGAYWRGDS+R ML RIYG A+  +++L  +L  LE
Sbjct: 182 DLCRGPHLQHTGQVPGDAFKLMSIAGAYWRGDSDRAMLQRIYGVAFTGKEKLKAHLTMLE 241

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+ KRDHRKL REMDLFH+ E+  G +FWH  GW I+ TL  YMRRK +   Y+E+NTPQ
Sbjct: 242 EAAKRDHRKLGREMDLFHMQEEAPGQVFWHPNGWSIYTTLQDYMRRKQRAAGYQEVNTPQ 301

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW+ SGHWD Y+ +MF V+  +D  ++    ALKPMNCP HV +FN GLKSYR+L
Sbjct: 302 VVDRKLWEASGHWDKYQEHMFIVEVDEDHAREKAVNALKPMNCPCHVQIFNQGLKSYRDL 361

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFGS  R EPSG+LHG+MRVRGFTQDD H FC ++Q+  EC      + S+Y+D 
Sbjct: 362 PLRMAEFGSCNRYEPSGALHGIMRVRGFTQDDGHTFCREDQIEAECAAFITYLSSVYQDL 421

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFEK  +  +TRPEKRVGS+  WD  E  ++  +    +         +  GEGAFYGPK
Sbjct: 422 GFEKFEIMFATRPEKRVGSEESWDHVEAALENAIKATGHPYT------LDEGEGAFYGPK 475

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++ L DAIGR+WQCGT QVD NLP R +A Y+     K  P M+HRA  GS ERFIGI+
Sbjct: 476 LDFKLTDAIGREWQCGTFQVDPNLPERLDATYIGQDGAKHRPYMLHRACLGSFERFIGIL 535

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IEN  G LP WL+P Q +V +I S A +Y  E+   L++  +  E D RNE INYK+REH
Sbjct: 536 IENSAGKLPFWLAPRQVVVASIISDADDYVLEVVEKLQAAGVRAEADVRNEKINYKVREH 595

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP-ILTKESLPPD 649
           S+ K+P+I+  G +E  E+++ +RR G   T  V  LDA+   L +E+ PPD
Sbjct: 596 SVGKVPVILAVGAREVEEKTVTLRRLGEKKT-SVETLDAVTQALGREATPPD 646


>gi|157826951|ref|YP_001496015.1| threonyl-tRNA synthetase [Rickettsia bellii OSU 85-389]
 gi|166225492|sp|A8GVV1|SYT_RICB8 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|157802255|gb|ABV78978.1| threonyl-tRNA synthetase [Rickettsia bellii OSU 85-389]
          Length = 633

 Score =  681 bits (1756), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 323/643 (50%), Positives = 440/643 (68%), Gaps = 15/643 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I ++FPDGS+K F  + T  ++A  IS SLAK A+   ING + DLS  +  +  + I+T
Sbjct: 2   INISFPDGSVKQFEKNITAFEIAVVISTSLAKAAMIAEINGDLKDLSTQIDNDCRLRILT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +DP  L VIRH  AH+ AEAV+ ++PE QV IGP IE+G+YYDF +++PF++D+LA IE
Sbjct: 62  AKDPECLEVIRHDAAHLTAEAVKELFPETQVTIGPAIENGYYYDFARDKPFTTDDLAVIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            KM E+  ++    ++    EKA E F+S  E YK EI+ SIP+ E ++LYRQG + DLC
Sbjct: 122 AKMHELAKKNEKVTRELWDREKAVEFFKSIGEHYKAEIIASIPSNEPISLYRQGNFIDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH  STG VK F KLMKVAGAYWRGDS   +L RIYGTAW T+++L  YL+ LEE+EK
Sbjct: 182 RGPHAPSTGFVKHF-KLMKVAGAYWRGDSRNEVLQRIYGTAWATKEQLESYLFMLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQ 302
           RDHRKL +E+DLFH  E+  G++FWH KGW ++ T+  Y+RRKI K+ Y E+ TP ++D+
Sbjct: 241 RDHRKLGKELDLFHFQEEAQGMVFWHDKGWSVYNTIEQYIRRKIRKNGYIEVKTPVLVDK 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW+ +R +MFA++  D      +T ALKPMNCP HV +F  G+KSYR+LP+R+
Sbjct: 301 SLWELSGHWEKFRDDMFALETDD------KTLALKPMNCPCHVQIFKQGIKSYRDLPLRM 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           +EFG  +RNE SG+LHGLMRVR   QDDAH+FC +EQ+ +E +    L+  +YKDFGF  
Sbjct: 355 SEFGLCHRNEASGALHGLMRVRSLVQDDAHIFCAEEQITDETVSFCKLLTEVYKDFGFTD 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I VK S RPE R GS   WD AEN +K  ++  K      +N G    EGAFYGPK E++
Sbjct: 415 IKVKFSDRPEVRAGSSETWDKAENALKEAVE--KAGYSYTLNPG----EGAFYGPKLEFV 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L DAIGR WQCGT+Q+DF LP R +A YV +  EK  PVM+HRA+ GS+ERFIGI+IE +
Sbjct: 469 LTDAIGRQWQCGTLQMDFVLPERLDASYVAASGEKKRPVMLHRAILGSLERFIGILIEEY 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  PLWL+P+Q  + TITS   +YA E+   L    + ++ +   + INYKIRE S +K
Sbjct: 529 AGRFPLWLAPVQVAIATITSDLNDYALEVQKALIESGVRVDINISPDKINYKIREFSNQK 588

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           +P+I + G +E   + + IRR G+T  + +S+   I  + +E+
Sbjct: 589 VPMIAVIGKQEKENKQVTIRRLGTTEQEVLSIEQLIEYIREEN 631


>gi|144899402|emb|CAM76266.1| Threonyl-tRNA synthetase [Magnetospirillum gryphiswaldense MSR-1]
          Length = 638

 Score =  681 bits (1756), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 324/647 (50%), Positives = 445/647 (68%), Gaps = 14/647 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKV-CDLSDPVREGSIEIIT 63
           + +T PDGS++ FP   TG DVA+SI   LAK A+A+ I+G +    +    +  + I+T
Sbjct: 2   VAITLPDGSVREFPGPVTGLDVAKSIGAGLAKAALAIRIDGVMKDLTTTLTTDCKLAIVT 61

Query: 64  PED-PRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
            +D   +L ++RH  AH+MAEAV+ ++PE QV IGP IE+GFYYDF +  PF  ++L +I
Sbjct: 62  AKDGADALELLRHDAAHVMAEAVKELYPETQVTIGPSIENGFYYDFARPTPFGPEDLEKI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M+EI+ RD    ++  + + A   FE   E YK EI+ SIPA + + LYRQG + DL
Sbjct: 122 EARMREIVDRDEAITREEWNRDDAVAFFEGLGEKYKAEIIASIPADQPIGLYRQGNFIDL 181

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ ST ++ K FKLMK+AGAYWRGDS   ML RIYGTAW  +++L  YL+ LEE+E
Sbjct: 182 CRGPHLPSTAKLGKAFKLMKLAGAYWRGDSRNEMLQRIYGTAWFDKKDLDSYLHMLEEAE 241

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD 301
           KRDHR+L REM+LFH+ E+  G +FWH+KGW +++T+ SYMR +++ ++Y+E+ TPQ++D
Sbjct: 242 KRDHRRLGREMNLFHLQEEAVGAVFWHQKGWALYRTVESYMRNRLEAENYQEVKTPQLVD 301

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             LW+ SGH D +  +MF +K  D+     R  A+KPMNCP HV +F  G+KSYR+LP+R
Sbjct: 302 FSLWEASGHADKFSESMFTIKTQDE-----RHLAVKPMNCPCHVQIFRQGIKSYRDLPLR 356

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AEFGS +R EPSG+LHG+MRVR FTQDDAH+FCT++Q+ +E +    L+  +Y+DFGF 
Sbjct: 357 MAEFGSCHRYEPSGALHGIMRVRAFTQDDAHIFCTEDQITSETIAFCQLLKLVYQDFGFT 416

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + VK S RPEKR GSD  WD      K     +  +    + T +  GEGAFYGPK E+
Sbjct: 417 DVRVKFSDRPEKRAGSDETWD------KAESALLAAAQAAGLETTLNPGEGAFYGPKLEF 470

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
           +L+DAIGRDWQCGT+QVDF LP R +A Y      +  PVM+HRAV GS ERFIGI+IEN
Sbjct: 471 VLRDAIGRDWQCGTLQVDFVLPERLDASYTAEDGSRRRPVMLHRAVLGSFERFIGILIEN 530

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           F G  PLWLSPIQ +V TI S A +YAQ +A  L+   L +ETD RNE IN K+ EHS  
Sbjct: 531 FAGRFPLWLSPIQVVVATIVSDADDYAQSVAAKLRGAGLRVETDLRNEKINKKVAEHSNA 590

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
           K+P++++ G +EA E ++ +RR GS   + ++L  A+  L  E+ PP
Sbjct: 591 KVPVLLVVGRREAEEGTVAVRRLGSQGQEFLALDQALATLVNEAAPP 637


>gi|311105446|ref|YP_003978299.1| threonyl-tRNA synthetase [Achromobacter xylosoxidans A8]
 gi|310760135|gb|ADP15584.1| threonyl-tRNA synthetase [Achromobacter xylosoxidans A8]
          Length = 650

 Score =  680 bits (1755), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 315/647 (48%), Positives = 448/647 (69%), Gaps = 20/647 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAI-----NGKVCDLSDPVR-EGS 58
           +++T PDGS + +P   T ++VA+SI   LAK A+   +     + K+ D S  +  +  
Sbjct: 2   VQITLPDGSQRQYPGPVTVAEVAQSIGTGLAKAALGGRVTFEGSDSKLVDTSFRIEGDAR 61

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           + I+T +D   L +IRHS AH++A AV+ ++P+ QV IGP+I++GFYYDF  ++PF+ ++
Sbjct: 62  LAIVTAKDADGLDLIRHSTAHLLAYAVKELFPDAQVTIGPVIDNGFYYDFSYKRPFTPED 121

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           LA IEKKM E+  +D    ++  S + A E F+   E YK EI+ SIP+ E ++LYR+G+
Sbjct: 122 LAAIEKKMAELAKKDEVVTREEWSRDDAVEFFKGIGEKYKAEIIASIPSNEPLSLYREGD 181

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + DLCRGPHV STG++K  FKLMKVAGAYWRGDS   ML RIYGTAW T++E   YL+ L
Sbjct: 182 FIDLCRGPHVPSTGKLK-VFKLMKVAGAYWRGDSKNEMLQRIYGTAWATKEEQEAYLHML 240

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTP 297
           EE+E+RDHRK+ RE++LFH  ++  G+IFWH KGW ++Q +  YMR   +D+ Y+E+  P
Sbjct: 241 EEAERRDHRKIGRELELFHFQDEAPGLIFWHPKGWALWQQVEQYMRSVYRDNGYQEVKAP 300

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           Q+LD  LW+++GHWD+YR NMF  +  +      R + LKPMNCPGHV +FN GL SYRE
Sbjct: 301 QILDISLWKKTGHWDNYRENMFTTESEN------RVYGLKPMNCPGHVQIFNAGLHSYRE 354

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R  EFG  +RNEPSGSLHG+MRVRGFTQDD H+FCT+EQ+ +EC     L+  +Y+D
Sbjct: 355 LPLRYGEFGQCHRNEPSGSLHGMMRVRGFTQDDGHIFCTEEQLQDECADFTALLQKVYRD 414

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF +++ K++TRPEKR+GSD +WD AE  +   +++++ +        V  GEGAFYGP
Sbjct: 415 FGFTEVLYKVATRPEKRIGSDEVWDTAEAAL---MESLRRTG---CEFEVSPGEGAFYGP 468

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K EY LKDAIGR WQCGTIQVDF++P R  A YV+ + ++  PVM+HRA+ GS+ERFIG+
Sbjct: 469 KVEYTLKDAIGRHWQCGTIQVDFSMPVRLGAEYVDQNDQRRPPVMLHRAILGSLERFIGM 528

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IEN  G +P WL+P+QA+V  I+  + +YA EI   LK     +E+D R E I  KIRE
Sbjct: 529 LIENHAGAMPPWLAPVQAVVCCISEPSADYAAEITQSLKKQGFRVESDLRGEKITRKIRE 588

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           HS++K+P I++ GDKE    ++ +R  G      ++  + +  L+++
Sbjct: 589 HSLQKVPYILVVGDKEKQNGTVAVRGLGGLDLGAIAYDEFVARLSED 635


>gi|126729010|ref|ZP_01744825.1| threonyl-tRNA synthetase [Sagittula stellata E-37]
 gi|126710940|gb|EBA09991.1| threonyl-tRNA synthetase [Sagittula stellata E-37]
          Length = 660

 Score =  680 bits (1755), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 333/663 (50%), Positives = 444/663 (66%), Gaps = 22/663 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           + I LTFPDG+ ++F    T ++VA SIS+SL KKA++  ++G   DL  P+  + +I I
Sbjct: 2   AQISLTFPDGTQRSFDKGVTPAEVAASISKSLGKKAISAQVDGAHYDLQWPIETDAAIAI 61

Query: 62  IT-PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            T  +D  +L +IRH  AHIMA AVQ IWP+V+V IGP+IE G+YYDFD+ +PF+ ++L 
Sbjct: 62  NTLADDGPALELIRHDLAHIMARAVQEIWPDVKVTIGPVIEHGWYYDFDRAEPFTPEDLG 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-ENVTLYRQGEW 179
            IEKKM+EII    P   +  S   A   +E   E YKVE++ +IP   + + +Y  G+W
Sbjct: 122 LIEKKMKEIINARDPVRTEVWSRADAIAHYEKTGENYKVELVNAIPDDGQPIRMYWHGDW 181

Query: 180 FDLCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
            DLCRGPH+++TGQV    FKLM VAGAYWRGDS R ML RIYG A+  + +L ++L  L
Sbjct: 182 QDLCRGPHLQNTGQVPGDAFKLMSVAGAYWRGDSKRQMLQRIYGVAFKNRDDLKKHLNML 241

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
           EE+ KRDHRKL REMDLFH+ E+  G +FWH  GW I+ TL  YMRRK +   Y+EINTP
Sbjct: 242 EEAAKRDHRKLGREMDLFHMQEEAPGQVFWHPNGWTIYTTLQEYMRRKQRAGGYQEINTP 301

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCA--------DDTIKD---LRTFALKPMNCPGHVA 346
           QV+D+ LW+ SGHW+ Y+ +MF V+          D T K+    R  ALKPMNCP HV 
Sbjct: 302 QVVDRKLWEASGHWEKYQHHMFIVEVDESRDGEHDDATAKNKEQTRINALKPMNCPCHVQ 361

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           VFN GLKSYR+LP+RLAEFGS  R EPSG+LHG+MRVRGFTQDDAH+FCT++Q+  EC +
Sbjct: 362 VFNQGLKSYRDLPLRLAEFGSCARYEPSGALHGIMRVRGFTQDDAHIFCTEDQIEAECAR 421

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
               +  IY++ GF    +K +TRPEKRVG++  WD  EN ++   + I+ + +      
Sbjct: 422 FIEFLADIYRELGFPTFEIKFATRPEKRVGTEESWDYVENALE---EAIRKTGR---TYT 475

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
           +  G+GAFYGPK ++ L DAIGR WQCGT QVD NLP R  A Y+  + +K  P M+HRA
Sbjct: 476 LEPGDGAFYGPKLDFYLTDAIGRVWQCGTFQVDPNLPERLGASYIAPNGDKTRPFMLHRA 535

Query: 527 VFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF 586
             GS ERF+GI+IE   G LP WL+P Q +V +ITS A +Y QE+  LL+   +  E D 
Sbjct: 536 TLGSFERFVGILIEEHAGKLPFWLAPRQVVVASITSEADDYVQEVTELLRKAGVRAEADI 595

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           RNE INYK+REHS+ K+P+I+  G +E  ER++ +RR G   T   SL D +  L++ + 
Sbjct: 596 RNEKINYKVREHSVGKVPVILAIGHREVEERTVTVRRLGEKQTSVTSLTDIVSELSRSAT 655

Query: 647 PPD 649
           PPD
Sbjct: 656 PPD 658


>gi|167570156|ref|ZP_02363030.1| threonyl-tRNA synthetase [Burkholderia oklahomensis C6786]
          Length = 635

 Score =  680 bits (1754), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 313/625 (50%), Positives = 438/625 (70%), Gaps = 15/625 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           + +  PDGS++ +    T ++VA SI   LAK A+   ++G++ D S  + R+ S+ I+T
Sbjct: 2   VSIRLPDGSVRQYEHPVTVAEVAASIGPGLAKAALGGKLDGELVDTSTLIDRDASLAIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   L +IRHS AH++A AV+ ++P+ QV IGP+I++GFYYDF   +PF+ ++L +IE
Sbjct: 62  DKDADGLDIIRHSTAHLLAYAVKDLYPDAQVTIGPVIDNGFYYDFSYHRPFTPEDLEKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+MQE++ +D P  ++ +S ++A   F S  E YK EI+ESIPA + + LY  G + DLC
Sbjct: 122 KRMQELVKKDEPVTRRVVSRDEAVSYFRSIGEKYKAEIIESIPASDEIKLYAHGGFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV STG++K  FKLMKVAGAYWRGDS    L RIYGTAW  +++   YL+ LEE+EK
Sbjct: 182 RGPHVPSTGKLK-VFKLMKVAGAYWRGDSKNEQLQRIYGTAWTKKEDQDAYLHMLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQ 302
           RDHRKL +++DLFHI E+  G++FWH KGW ++Q +  YMRR++    Y EI TP ++D+
Sbjct: 241 RDHRKLGKQLDLFHIQEESPGMVFWHPKGWTLWQQVEQYMRRRLDAAGYLEIKTPMIMDR 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW +YR NMF       T  + R +A+KPMNCPGHV VF HGL+SYR+LP+R 
Sbjct: 301 SLWEASGHWQNYRENMFT------TESEKRDYAVKPMNCPGHVQVFKHGLRSYRDLPLRY 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNE SG+LHGLMRVRGF QDDAH+FCT+EQ+ +E +  + L +S+Y+DFGF++
Sbjct: 355 AEFGSCHRNEASGALHGLMRVRGFVQDDAHIFCTEEQINSEAIAFNKLAMSVYEDFGFDR 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I +KLS RPE+R+GSD  WD AE+ ++  L       ++      L GEGAFYGPK EY 
Sbjct: 415 IDIKLSLRPEQRMGSDETWDHAEDGLRKALKACGVEWEE------LPGEGAFYGPKIEYH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+GR WQCGT+Q+D  LP R  A YV   + +  PVM+HRA+ GS+ERF+GI+IE+ 
Sbjct: 469 IKDALGRSWQCGTLQLDMMLPERLGAEYVAEDNSRRRPVMLHRAIVGSMERFLGILIEHH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G +P WL+P  A+V  I  S VEYAQ +A  L+   L +  D RNE I+YKIREH+++K
Sbjct: 529 AGAMPAWLAPAHAVVLNIAESQVEYAQTVAQSLQKQGLRVSADLRNEKISYKIREHTLEK 588

Query: 603 IPIIIICGDKEASERSIGIRRFGST 627
           +P +++ GDKE   +++ +R  G  
Sbjct: 589 VPYLLVVGDKEREAQTVAVRARGGV 613


>gi|167562968|ref|ZP_02355884.1| threonyl-tRNA synthetase [Burkholderia oklahomensis EO147]
          Length = 635

 Score =  680 bits (1754), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 313/625 (50%), Positives = 438/625 (70%), Gaps = 15/625 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           + +  PDGS++ +    T ++VA SI   LAK A+   ++G++ D S  + R+ S+ I+T
Sbjct: 2   VSIRLPDGSVRQYEHPVTVAEVAASIGPGLAKAALGGKLDGELVDTSALIDRDASLAIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   L +IRHS AH++A AV+ ++P+ QV IGP+I++GFYYDF   +PF+ ++L +IE
Sbjct: 62  DKDADGLDIIRHSTAHLLAYAVKDLYPDAQVTIGPVIDNGFYYDFSYHRPFTPEDLEKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+MQE++ +D P  ++ +S ++A   F S  E YK EI+ESIPA + + LY  G + DLC
Sbjct: 122 KRMQELVKKDEPVTRRVVSRDEAVSYFRSIGEKYKAEIIESIPASDEIKLYAHGGFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV STG++K  FKLMKVAGAYWRGDS    L RIYGTAW  +++   YL+ LEE+EK
Sbjct: 182 RGPHVPSTGKLK-VFKLMKVAGAYWRGDSKNEQLQRIYGTAWTKKEDQDAYLHMLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQ 302
           RDHRKL +++DLFHI E+  G++FWH KGW ++Q +  YMRR++    Y EI TP ++D+
Sbjct: 241 RDHRKLGKQLDLFHIQEESPGMVFWHPKGWTLWQQVEQYMRRRLDAAGYLEIKTPMIMDR 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW +YR NMF       T  + R +A+KPMNCPGHV VF HGL+SYR+LP+R 
Sbjct: 301 SLWEASGHWQNYRENMFT------TESEKRDYAVKPMNCPGHVQVFKHGLRSYRDLPLRY 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNE SG+LHGLMRVRGF QDDAH+FCT+EQ+ +E +  + L +S+Y+DFGF++
Sbjct: 355 AEFGSCHRNEASGALHGLMRVRGFVQDDAHIFCTEEQINSEAIAFNKLAMSVYEDFGFDR 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I +KLS RPE+R+GSD  WD AE+ ++  L       ++      L GEGAFYGPK EY 
Sbjct: 415 IDIKLSLRPEQRMGSDETWDHAEDGLRKALKACGVEWEE------LPGEGAFYGPKIEYH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+GR WQCGT+Q+D  LP R  A YV   + +  PVM+HRA+ GS+ERF+GI+IE+ 
Sbjct: 469 IKDALGRSWQCGTLQLDMMLPERLGAEYVAEDNSRRRPVMLHRAIVGSMERFLGILIEHH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G +P WL+P  A+V  I  S VEYAQ +A  L+   L +  D RNE I+YKIREH+++K
Sbjct: 529 AGAMPAWLAPAHAVVLNIAESQVEYAQTVAQSLQKQGLRVSADLRNEKISYKIREHTLEK 588

Query: 603 IPIIIICGDKEASERSIGIRRFGST 627
           +P +++ GDKE   +++ +R  G  
Sbjct: 589 VPYLLVVGDKEREAQTVAVRARGGV 613


>gi|115351412|ref|YP_773251.1| threonyl-tRNA synthetase [Burkholderia ambifaria AMMD]
 gi|122323391|sp|Q0BG06|SYT_BURCM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|115281400|gb|ABI86917.1| Ser-tRNA(Thr) hydrolase [Burkholderia ambifaria AMMD]
          Length = 635

 Score =  679 bits (1753), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 314/625 (50%), Positives = 433/625 (69%), Gaps = 15/625 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           + +  PDGS++ +    T ++VA SI   LAK A+   ++G++ D S  + R+ ++ IIT
Sbjct: 2   VSIRLPDGSVRQYEHPVTVAEVAASIGPGLAKAALGGKLDGELVDTSTVIDRDAALAIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   L +IRHS AH++A AV+ ++P+ QV IGP+I++GFYYDF   +PF+ ++L +IE
Sbjct: 62  DKDADGLDIIRHSTAHLLAYAVKELYPDAQVTIGPVIDNGFYYDFSYNRPFTPEDLEKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+MQEI  +D P  ++ +S ++A   F S  E YK EI+ESIP  + + LY  G + DLC
Sbjct: 122 KRMQEIAKKDEPVTRRVVSRDEAAGYFRSIGEKYKAEIIESIPQTDEIKLYSHGGFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV STG++K  FKLMKVAGAYWRGDS    L RIYGTAW  +++  QYL+ LEE+EK
Sbjct: 182 RGPHVPSTGKLK-VFKLMKVAGAYWRGDSKNEQLQRIYGTAWTKKEDQDQYLHMLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ E+  G++FWH KGW ++Q +  YMRR++ D  Y EI TP ++D+
Sbjct: 241 RDHRKLGKQLDLFHMQEESPGMVFWHPKGWALWQQVEQYMRRRVNDAGYLEIKTPMIMDR 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW +YR NMF       T  + R +A+KPMNCPGHV VF HGL+SYR+LP+R 
Sbjct: 301 SLWEASGHWQNYRENMFT------TESEKRDYAIKPMNCPGHVQVFKHGLRSYRDLPLRY 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNE SG+LHGLMRVRGF QDDAH+FCT+EQ   E +  + L +S+YKDFGFE 
Sbjct: 355 AEFGSCHRNEASGALHGLMRVRGFVQDDAHIFCTEEQFIAESIAFNTLAMSVYKDFGFEH 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I +KLS RPE+R G+D  WD AE  ++  L     S ++      L GEGAFYGPK EY 
Sbjct: 415 IDIKLSLRPEQRAGTDETWDRAEQGLRDALTACGLSWEE------LPGEGAFYGPKIEYH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+GR WQCGT+Q+D  LP R  A YV   + +  PVM+HRA+ GS+ERF+GI+IE+ 
Sbjct: 469 IKDALGRSWQCGTLQLDMVLPERLGAEYVAEDNSRRRPVMLHRAIVGSMERFLGILIEHH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G +P WL+P QA+V  I  S VEYA  +   L+   + +  D RNE I+YKIREH+++K
Sbjct: 529 AGAMPAWLAPFQAVVLNIAESQVEYAHSLTQTLQKQGVRVAGDLRNEKISYKIREHTLEK 588

Query: 603 IPIIIICGDKEASERSIGIRRFGST 627
           +P +++ GDKE   +++ +R  G  
Sbjct: 589 VPYLLVVGDKERDAQTVAVRARGGV 613


>gi|78066086|ref|YP_368855.1| threonyl-tRNA synthetase [Burkholderia sp. 383]
 gi|123756187|sp|Q39H55|SYT_BURS3 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|77966831|gb|ABB08211.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Burkholderia
           sp. 383]
          Length = 635

 Score =  679 bits (1753), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 311/625 (49%), Positives = 436/625 (69%), Gaps = 15/625 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           + +  PDGS++ +    T ++VA SI   LAK A+   ++G++ D S  + R+ S+ I+T
Sbjct: 2   VSIRLPDGSVRQYEHPVTVAEVAASIGPGLAKAALGGKLDGELVDTSAVIDRDASLAIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   L +IRHS AH++A AV+ ++P+ QV IGP+I++GFYYDF   +PF+ ++L +IE
Sbjct: 62  DKDADGLDIIRHSTAHLLAYAVKELYPDAQVTIGPVIDNGFYYDFSYNRPFTPEDLEKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+MQE++ +D P  ++ +S ++A   F S  E YK EI+ESIP  + + LY  G + DLC
Sbjct: 122 KRMQELVKKDEPVTRRVVSRDEAAGYFRSIGEKYKAEIIESIPQSDEIKLYSHGGFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV STG++K  FKLMKVAGAYWRGDS    L RIYGTAW  +++  QYL+ LEE+EK
Sbjct: 182 RGPHVPSTGKLK-VFKLMKVAGAYWRGDSKNEQLQRIYGTAWTRKEDQDQYLHMLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ E+  G++FWH KGW ++Q +  YMRR++ +  Y EI TP ++D+
Sbjct: 241 RDHRKLGKQLDLFHMQEESPGMVFWHPKGWALWQQVEQYMRRRVNEAGYLEIKTPMIMDR 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW +YR NMF       T  + R +A+KPMNCPGHV VF HGL+SYR+LP+R 
Sbjct: 301 SLWEASGHWQNYRENMFT------TESEKRDYAIKPMNCPGHVQVFKHGLRSYRDLPLRY 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNE SG+LHGLMRVRGF QDDAH+FCT++Q  +E +  + L +S+YKDFGF+ 
Sbjct: 355 AEFGSCHRNEASGALHGLMRVRGFVQDDAHIFCTEDQFISESIAFNTLAMSVYKDFGFDH 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I +KLS RPE+R G+D  WD AE  ++  L     + ++      L GEGAFYGPK EY 
Sbjct: 415 IDIKLSLRPEQRAGTDETWDRAEQGLRDALTACGLTWEE------LPGEGAFYGPKIEYH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+GR WQCGT+Q+D  LP R  A YV   S +  PVM+HRA+ GS+ERF+GI+IE+ 
Sbjct: 469 IKDALGRSWQCGTLQLDMVLPERLGAEYVADDSSRRRPVMLHRAIVGSMERFLGILIEHH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G +P WL+P QA+V  I  S  EYAQ +A  L+   + +  D RNE I+YKIREH+++K
Sbjct: 529 AGAMPAWLAPFQAVVLNIAESQAEYAQSLAQSLQKQGVRVTADLRNEKISYKIREHTLEK 588

Query: 603 IPIIIICGDKEASERSIGIRRFGST 627
           +P +++ GDKE   +++ +R  G  
Sbjct: 589 VPYLLVVGDKERDAQTVAVRARGGV 613


>gi|325528727|gb|EGD05797.1| threonyl-tRNA synthetase [Burkholderia sp. TJI49]
          Length = 635

 Score =  679 bits (1753), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 312/625 (49%), Positives = 434/625 (69%), Gaps = 15/625 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           + +  PDGS++ +    T ++VA SI   LAK A+   ++G++ D S  + R+ S+ I+T
Sbjct: 2   VSIRLPDGSVRQYEHPVTVAEVAASIGPGLAKAALGGKLDGELVDTSTVIDRDASLAIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   L +IRHS AH++A AV+ ++P+ QV IGP+I++GFYYDF   +PF+ ++L +IE
Sbjct: 62  DKDADGLDIIRHSTAHLLAYAVKELYPDAQVTIGPVIDNGFYYDFSYNRPFTPEDLEKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+MQE+  +D P  ++ +S ++A   F S  E YK EI+ESIP  + + LY  G + DLC
Sbjct: 122 KRMQELAKKDEPVTRRVVSRDEAAGYFRSIGEKYKAEIIESIPQSDEIKLYSHGGFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV STG++K  FKLMKVAGAYWRGDS    L RIYGTAW  +++  QYL+ LEE+EK
Sbjct: 182 RGPHVPSTGKLK-VFKLMKVAGAYWRGDSKNEQLQRIYGTAWTKKEDQDQYLHMLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ E+  G++FWH KGW ++Q +  YMRR++ +  Y EI TP ++D+
Sbjct: 241 RDHRKLGKQLDLFHMQEESPGMVFWHPKGWALWQQVEQYMRRRVNEAGYLEIKTPMIMDR 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW +YR NMF       T  + R +A+KPMNCPGHV VF HGL+SYR+LP+R 
Sbjct: 301 SLWEASGHWQNYRENMFT------TESEKRDYAIKPMNCPGHVQVFKHGLRSYRDLPLRY 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNE SG+LHGLMRVRGF QDDAH+FCT+EQ   E +  + L +S+YKDFGFE 
Sbjct: 355 AEFGSCHRNEASGALHGLMRVRGFVQDDAHIFCTEEQFIAESIAFNTLAMSVYKDFGFEH 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I +KLS RPE+R G+D  WD AE  ++  L     S ++      L GEGAFYGPK EY 
Sbjct: 415 IDIKLSLRPEQRAGTDETWDRAEQGLRDALTACGLSWEE------LPGEGAFYGPKIEYH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+GR WQCGT+Q+D  LP R  A YV   + +  PVM+HRA+ GS+ERF+GI+IE+ 
Sbjct: 469 IKDALGRSWQCGTLQLDMVLPERLGAEYVAEDNSRRRPVMLHRAIVGSMERFLGILIEHH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G +P WL+PIQ +V  I  S  +YAQ +A  L+   + +  D RNE I+YKIREH+++K
Sbjct: 529 AGAMPAWLAPIQVVVMNIAESQADYAQSLAQTLQKQGVRVTADLRNEKISYKIREHTLEK 588

Query: 603 IPIIIICGDKEASERSIGIRRFGST 627
           +P +++ GDKE   +++ +R  G  
Sbjct: 589 VPYLLVVGDKERDAQTVAVRARGGV 613


>gi|171318442|ref|ZP_02907597.1| threonyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
 gi|171096356|gb|EDT41258.1| threonyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
          Length = 635

 Score =  679 bits (1752), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 313/625 (50%), Positives = 433/625 (69%), Gaps = 15/625 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           + +  PDGS++ +    T ++VA SI   LAK A+   ++G++ D S  + R+ ++ I+T
Sbjct: 2   VSIRLPDGSVRQYEHPVTVAEVAASIGPGLAKAALGGKLDGELVDTSTVIDRDAALAIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   L +IRHS AH++A AV+ ++P+ QV IGP+I++GFYYDF   +PF+ ++L +IE
Sbjct: 62  DKDADGLDIIRHSTAHLLAYAVKELYPDAQVTIGPVIDNGFYYDFSYNRPFTPEDLEKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+MQEI  +D P  ++ +S ++A   F S  E YK EI+ESIP  + + LY  G + DLC
Sbjct: 122 KRMQEIAKKDEPVTRRVVSRDEAAGYFRSIGEKYKAEIIESIPQSDEIKLYSHGGFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV STG++K  FKLMKVAGAYWRGDS    L RIYGTAW  +++  QYL+ LEE+EK
Sbjct: 182 RGPHVPSTGKLK-VFKLMKVAGAYWRGDSKNEQLQRIYGTAWTKKEDQDQYLHMLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ E+  G++FWH KGW ++Q +  YMRR++ D  Y EI TP ++D+
Sbjct: 241 RDHRKLGKQLDLFHMQEESPGMVFWHPKGWALWQQVEQYMRRRVNDAGYLEIKTPMIMDR 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW +YR NMF       T  + R +A+KPMNCPGHV VF HGL+SYR+LP+R 
Sbjct: 301 SLWEASGHWQNYRENMFT------TESEKRDYAIKPMNCPGHVQVFKHGLRSYRDLPLRY 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNE SG+LHGLMRVRGF QDDAH+FCT+EQ   E +  + L +S+YKDFGFE 
Sbjct: 355 AEFGSCHRNEASGALHGLMRVRGFVQDDAHIFCTEEQFIAESIAFNTLAMSVYKDFGFEH 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I +KLS RPE+R G+D  WD AE  ++  L     S ++      L GEGAFYGPK EY 
Sbjct: 415 IDIKLSLRPEQRAGTDETWDRAEQGLRDALTACGLSWEE------LPGEGAFYGPKIEYH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+GR WQCGT+Q+D  LP R  A YV   + +  PVM+HRA+ GS+ERF+GI+IE+ 
Sbjct: 469 IKDALGRSWQCGTLQLDMVLPERLGAEYVAEDNSRRRPVMLHRAIVGSMERFLGILIEHH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G +P WL+P QA+V  I  S VEYA  +   L+   + +  D RNE I+YKIREH+++K
Sbjct: 529 AGAMPAWLAPFQAVVLNIAESQVEYAHSLTQTLQKQGVRVAGDLRNEKISYKIREHTLEK 588

Query: 603 IPIIIICGDKEASERSIGIRRFGST 627
           +P +++ GDKE   +++ +R  G  
Sbjct: 589 VPYLLVVGDKERDAQTVAVRARGGV 613


>gi|170701132|ref|ZP_02892106.1| threonyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
 gi|170133954|gb|EDT02308.1| threonyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
          Length = 635

 Score =  679 bits (1752), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 313/625 (50%), Positives = 433/625 (69%), Gaps = 15/625 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           + +  PDGS++ +    T ++VA SI   LAK A+   ++G++ D S  + R+ ++ I+T
Sbjct: 2   VSIRLPDGSVRQYEHPVTVAEVAASIGPGLAKAALGGKLDGELVDTSTVIDRDAALAIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   L +IRHS AH++A AV+ ++P+ QV IGP+I++GFYYDF   +PF+ ++L +IE
Sbjct: 62  DKDADGLDIIRHSTAHLLAYAVKELYPDAQVTIGPVIDNGFYYDFSYNRPFTPEDLEKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+MQEI  +D P  ++ +S ++A   F S  E YK EI+ESIP  + + LY  G + DLC
Sbjct: 122 KRMQEIAKKDEPVTRRVVSRDEAAGYFRSIGEKYKAEIIESIPQTDEIKLYSHGGFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV STG++K  FKLMKVAGAYWRGDS    L RIYGTAW  +++  QYL+ LEE+EK
Sbjct: 182 RGPHVPSTGKLK-VFKLMKVAGAYWRGDSKNEQLQRIYGTAWTKKEDQDQYLHMLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ E+  G++FWH KGW ++Q +  YMRR++ D  Y EI TP ++D+
Sbjct: 241 RDHRKLGKQLDLFHMQEESPGMVFWHPKGWALWQQVEQYMRRRVNDAGYLEIKTPMIMDR 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW +YR NMF       T  + R +A+KPMNCPGHV VF HGL+SYR+LP+R 
Sbjct: 301 SLWEASGHWQNYRENMFT------TESEKRDYAIKPMNCPGHVQVFKHGLRSYRDLPLRY 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNE SG+LHGLMRVRGF QDDAH+FCT+EQ   E +  + L +S+YKDFGFE 
Sbjct: 355 AEFGSCHRNEASGALHGLMRVRGFVQDDAHIFCTEEQFIAESIAFNTLAMSVYKDFGFEH 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I +KLS RPE+R G+D  WD AE  ++  L     S ++      L GEGAFYGPK EY 
Sbjct: 415 IDIKLSLRPEQRAGTDETWDRAEQGLRDALTACGLSWEE------LPGEGAFYGPKIEYH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+GR WQCGT+Q+D  LP R  A YV   + +  PVM+HRA+ GS+ERF+GI+IE+ 
Sbjct: 469 IKDALGRSWQCGTLQLDMVLPERLGAEYVAEDNSRRRPVMLHRAIVGSMERFLGILIEHH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G +P WL+P QA+V  I  S VEYA  +   L+   + +  D RNE I+YKIREH+++K
Sbjct: 529 AGAMPAWLAPFQAVVLNIAESQVEYAHSLTQTLQKQGVRVAGDLRNEKISYKIREHTLEK 588

Query: 603 IPIIIICGDKEASERSIGIRRFGST 627
           +P +++ GDKE   +++ +R  G  
Sbjct: 589 VPYLLVVGDKERDAQTVAVRARGGV 613


>gi|288940715|ref|YP_003442955.1| threonyl-tRNA synthetase [Allochromatium vinosum DSM 180]
 gi|288896087|gb|ADC61923.1| threonyl-tRNA synthetase [Allochromatium vinosum DSM 180]
          Length = 639

 Score =  679 bits (1752), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 310/620 (50%), Positives = 436/620 (70%), Gaps = 16/620 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS ++F    +  DVA +I   LAK A+A  ++G++ D S  + R+ ++ I+T +
Sbjct: 4   ITLPDGSQRSFEQPVSVHDVAAAIGPGLAKAALAGRVDGRLVDTSHVIDRDAALAIVTSK 63

Query: 66  DPRS-LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D  + L ++RH  AH+MA+AVQ ++P  QV IGP IE+GFYYDF +++PF+  +L +IE+
Sbjct: 64  DEETALELLRHDAAHVMAQAVQELYPGAQVTIGPAIENGFYYDFARDEPFTPADLERIEE 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESI-PAKENVTLYRQGEWFDLC 183
           +M EI+ RD P +++ +  E+A+ +F    E YKVEI++ I PA E V++YRQG+WFD+C
Sbjct: 124 RMHEIVKRDLPIVREIMDREEAKRVFAELGEHYKVEIIDDIIPAGEAVSIYRQGDWFDVC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG++   FKLMK+AGAYWRGDS   ML RIYGTAW  ++EL  YL+ LEE+EK
Sbjct: 184 RGPHLPSTGKLGNGFKLMKLAGAYWRGDSRNAMLQRIYGTAWRDKKELNAYLHRLEEAEK 243

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH  ++  G+ FWH KG  +++   +YMR K+ +  Y+E+ TPQVLD+
Sbjct: 244 RDHRKLGKQLDLFHFQDEAPGMAFWHAKGRVVYRLAETYMREKLDEYGYQEVETPQVLDR 303

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD +   MF     D      R FA+KPMNCPGH+ ++N GLKSYR+LP+RL
Sbjct: 304 SLWERSGHWDKFAGGMFTTHLDD------RDFAIKPMNCPGHIQLYNQGLKSYRDLPLRL 357

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFG V+RNEPSG+LHGLMR R FTQDDAHVFCT++Q+ +E   + +++   Y+DFGF+ 
Sbjct: 358 AEFGVVHRNEPSGTLHGLMRARRFTQDDAHVFCTEDQLQSEVATLIDMVFETYRDFGFDA 417

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I + LS RPE+RVG+D LWD AE  +   LD         +   +  GEGAFYGPK E+ 
Sbjct: 418 IDLALSLRPEQRVGADELWDKAEAALAQSLD------DKGLTYRIQPGEGAFYGPKIEFT 471

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D+IGR WQCGTIQVDF++P R  A Y+   + K  PVMIHRAV GS+ERFIGI+IE++
Sbjct: 472 LHDSIGRAWQCGTIQVDFSMPGRLGAHYIAEDNSKQTPVMIHRAVLGSVERFIGILIEHY 531

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G LP+WL+P+QA+   IT    +Y +E+   L+      E D RNE I +KIREH++++
Sbjct: 532 AGLLPVWLAPVQAVALNITDRQADYVKEVVKTLRDKGFRAEFDLRNEKIGFKIREHTLQR 591

Query: 603 IPIIIICGDKEASERSIGIR 622
           +P +++ GD+E   RS+ +R
Sbjct: 592 VPYLLVVGDREVETRSLSVR 611


>gi|114332291|ref|YP_748513.1| threonyl-tRNA synthetase [Nitrosomonas eutropha C91]
 gi|122313048|sp|Q0ADN4|SYT_NITEC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|114309305|gb|ABI60548.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Nitrosomonas
           eutropha C91]
          Length = 635

 Score =  678 bits (1750), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 323/638 (50%), Positives = 444/638 (69%), Gaps = 15/638 (2%)

Query: 9   FPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDP 67
            PDG+ K F    T  DVAESI   LA+ A+A  +NG++ DLS+P+  +  + +IT +DP
Sbjct: 6   LPDGTDKVFDYPVTVLDVAESIGPGLARVALAGKLNGRLVDLSEPIEIDSDLVLITNKDP 65

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQ 127
             L +IRHSCAH++A AV+ ++P  QV IGP+IEDGFYYDF  E+PF+ ++LA IEK+MQ
Sbjct: 66  EGLEIIRHSCAHLLAHAVKELFPSAQVTIGPVIEDGFYYDFSYERPFTPEDLAAIEKRMQ 125

Query: 128 EIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPH 187
           EI  R+    ++     KA   F+   E YK +I+ SIP  E V+LY QG++ DLCRGPH
Sbjct: 126 EISRRNLKIERKVWDRSKAIGFFKDLGEHYKAQIIASIPNDEPVSLYSQGDFTDLCRGPH 185

Query: 188 VRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHR 247
           V  T ++K  FKLMK+AGAYWRGDS   ML RIYGTAW + +E   YL  LEE+EKRDHR
Sbjct: 186 VPYTSRIK-VFKLMKIAGAYWRGDSKNEMLQRIYGTAWVSSEEQNNYLRRLEEAEKRDHR 244

Query: 248 KLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQ 306
           KL +++DLFH+ E+  G+++WH KGW I+Q +  YMR+ + K+ Y EI TPQVLD  LW+
Sbjct: 245 KLGKQLDLFHMQEEAPGMVYWHPKGWAIWQQIEQYMRQVLAKNGYVEIRTPQVLDISLWE 304

Query: 307 QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFG 366
           +SGHW+++R NMF       T  + R +A+KPMNCPGHV VFNHGL+SYR+LP+RLAEFG
Sbjct: 305 KSGHWENFRENMFI------TESESRHYAIKPMNCPGHVQVFNHGLRSYRDLPLRLAEFG 358

Query: 367 SVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK 426
           S +RNE SG+LHGLMRVR FTQDDAH+FCT++Q+  E  K  +L+  +Y DFGF + ++K
Sbjct: 359 SCHRNEASGALHGLMRVRSFTQDDAHIFCTEDQVLEEVTKFIDLLNQVYIDFGFHENLIK 418

Query: 427 LSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDA 486
           LSTRP +RVG++  WD      +         +Q  +N  +  GEGAFYGPK E+ LKD+
Sbjct: 419 LSTRPAQRVGTEEQWD------RAEAALAAALNQKELNWELQPGEGAFYGPKIEFTLKDS 472

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNL 546
           +GR WQCGT+Q+DF++P+R  A Y+   + K  PVM+HRA+ GS+ERFIGI+IE+  G L
Sbjct: 473 LGRKWQCGTLQLDFSMPARLGAGYIAEDNTKKIPVMLHRAILGSMERFIGILIEHHAGAL 532

Query: 547 PLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPII 606
           P+WLSP Q +V  I+ +  +Y Q I N LK + + + +D RNE I+YKIREHS++K+P +
Sbjct: 533 PVWLSPDQVVVLNISRNQADYVQSITNELKQNDIRVSSDLRNEKISYKIREHSLQKVPYL 592

Query: 607 IICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           I+ GDKE   +++ +R   +     +SL   + ++ KE
Sbjct: 593 IVVGDKEVENQTVTVRGRSNHDHGAMSLEGFVTLIRKE 630


>gi|172060451|ref|YP_001808103.1| threonyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
 gi|238689138|sp|B1YP13|SYT_BURA4 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|171992968|gb|ACB63887.1| threonyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
          Length = 635

 Score =  678 bits (1750), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 313/625 (50%), Positives = 432/625 (69%), Gaps = 15/625 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           + +  PDGS++ +    T ++VA SI   LAK A+   ++G++ D S  + R+ ++ IIT
Sbjct: 2   VSIRLPDGSVRQYEHPVTVAEVAASIGPGLAKAALGGKLDGELVDTSTVIDRDAALAIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   L +IRHS AH++A AV+ ++P+ QV IGP+I++GFYYDF   +PF+ ++L +IE
Sbjct: 62  DKDADGLDIIRHSTAHLLAYAVKELYPDAQVTIGPVIDNGFYYDFSYNRPFTPEDLEKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+MQEI  +D P  ++ +S ++A   F S  E YK EI+ESIP  + + LY  G + DLC
Sbjct: 122 KRMQEIAKKDEPVTRRVVSRDEAAGYFRSIGEKYKAEIIESIPQTDEIKLYSHGGFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV STG++K  FKLMKVAGAYWRGDS    L RIYGTAW  +++  QYL+ LEE+EK
Sbjct: 182 RGPHVPSTGKLK-VFKLMKVAGAYWRGDSKNEQLQRIYGTAWTKKEDQDQYLHMLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ E+  G++FWH KGW ++Q +  YMRR++ D  Y EI TP ++D+
Sbjct: 241 RDHRKLGKQLDLFHMQEESPGMVFWHPKGWALWQQVEQYMRRRVNDAGYLEIKTPMIMDR 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW +YR NMF       T  + R +A+KPMNCPGHV VF HGL+SYR+LP+R 
Sbjct: 301 SLWEASGHWQNYRENMFT------TESEKRDYAIKPMNCPGHVQVFKHGLRSYRDLPLRY 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNE SG+LHGLMRVRGF QDDAH+FCT+EQ   E +  + L +S+YKDFGFE 
Sbjct: 355 AEFGSCHRNEASGALHGLMRVRGFVQDDAHIFCTEEQFIAESIAFNTLAMSVYKDFGFEH 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I +KLS RPE+R G+D  WD AE  ++  L     S ++      L GEGAFYGPK EY 
Sbjct: 415 IDIKLSLRPEQRAGTDETWDRAEQGLRDALTACGLSWEE------LPGEGAFYGPKIEYH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+GR WQCGT+Q+D  LP R  A YV   + +  PVM+HRA+ GS+ERF+GI+IE+ 
Sbjct: 469 IKDALGRSWQCGTLQLDMVLPERLGAEYVAEDNSRRRPVMLHRAIVGSMERFLGILIEHH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G +P WL+P QA+V  I  S  EYA  +   L+   + +  D RNE I+YKIREH+++K
Sbjct: 529 AGAMPAWLAPFQAVVLNIAESQAEYAHSLTQTLQKQGVRVAGDLRNEKISYKIREHTLEK 588

Query: 603 IPIIIICGDKEASERSIGIRRFGST 627
           +P +++ GDKE   +++ +R  G  
Sbjct: 589 VPYLLVVGDKERDAQTVAVRARGGV 613


>gi|224826514|ref|ZP_03699615.1| threonyl-tRNA synthetase [Lutiella nitroferrum 2002]
 gi|224601115|gb|EEG07297.1| threonyl-tRNA synthetase [Lutiella nitroferrum 2002]
          Length = 632

 Score =  678 bits (1749), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 326/646 (50%), Positives = 449/646 (69%), Gaps = 19/646 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP DI+L  PDGS+++F    +  +VA SI   LA+ ++A  ++G++ D S  + R+  +
Sbjct: 1   MP-DIRL--PDGSVRSFDKPVSVHEVAASIGTGLARASLAGRVDGRLVDTSHVIDRDADL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L++IRHS AH++A AV+ ++PE QV IGP IE+GFYYDF  ++PF+ ++L
Sbjct: 58  AIITDKDADGLSIIRHSTAHLLAYAVKELFPEAQVTIGPEIENGFYYDFSYKRPFTPEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM E+  +D P  +  L  ++A   F+S  E YK EI+ESIP  E ++LYR+G++
Sbjct: 118 VAIEKKMGELAKKDIPVERYELPRDEAIAYFKSIGEHYKAEIIESIPQGEVLSLYREGDF 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV STG++K  FKLMKVAGAYWRGDS   ML R+YGTAW  +++L QYLY LE
Sbjct: 178 TDLCRGPHVPSTGKLK-VFKLMKVAGAYWRGDSKNEMLQRVYGTAWAKKEDLAQYLYMLE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+EKRDHRKL +++DLFH+ ++  G++FWH KGW+++Q++  YMR  + +  Y+EI TP 
Sbjct: 237 EAEKRDHRKLGKQLDLFHLQDEAPGMVFWHPKGWQLWQSVEQYMRATLAEAGYQEIRTPM 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHW++YR NMF       T  + R +A+KPMNCPGHV VFN GL+SYR+L
Sbjct: 297 VMDRILWEKSGHWENYRENMFT------TESEKRDYAVKPMNCPGHVQVFNQGLRSYRDL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R AEFG+ +RNEPSG+LHG+MRVRGF QDDAH+FCT+EQ+ +E    + L + +Y+ F
Sbjct: 351 PLRYAEFGACHRNEPSGALHGIMRVRGFVQDDAHIFCTEEQIIDEAKAFNELTMRVYRQF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+ + VKLS RPEK  G+   WD AEN ++  L          I    L GEGAFYGPK
Sbjct: 411 GFDNVSVKLSLRPEKYSGTLEAWDRAENGLREALRACG------IEWEELPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            EY +KDA+GR WQCGT+Q+D+ LP R  A YV   + +  PVM+HRA+ GS+ERF+GI+
Sbjct: 465 IEYHIKDALGRSWQCGTLQLDYVLPERLGAEYVAEDNSRKRPVMLHRAILGSLERFLGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IEN  G  PLWL+P+Q +V  IT +  +YA  +   LK     +E D RNE I+YKIREH
Sbjct: 525 IENHAGAFPLWLAPVQMVVMNITEAQADYAASVVQTLKKQGFRVELDLRNEKISYKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           S++K+P  II GDKE ++  I +R  G    Q ++L D +  L  E
Sbjct: 585 SLQKLPYQIIVGDKEKADGLIAVRARGEDLGQ-LTLDDFVARLKAE 629


>gi|163857146|ref|YP_001631444.1| threonyl-tRNA synthetase [Bordetella petrii DSM 12804]
 gi|229557977|sp|A9IRH6|SYT_BORPD RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|163260874|emb|CAP43176.1| thrS [Bordetella petrii]
          Length = 650

 Score =  678 bits (1749), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 312/643 (48%), Positives = 440/643 (68%), Gaps = 28/643 (4%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR--------- 55
           +++T PDGS + FP   T ++VA+SI   LAK     A+ G+V +     R         
Sbjct: 2   VQITLPDGSQRQFPGPVTVAEVAQSIGTGLAK----AALGGRVTEPGGEPRLVDTSYRLE 57

Query: 56  -EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPF 114
            +  + I+T +D   L +IRHS AH++A AV+ ++P+ QV IGP+I++GFYYDF  ++PF
Sbjct: 58  HDAQLAIVTAKDADGLDMIRHSTAHLLAYAVKELFPDAQVTIGPVIDNGFYYDFSYKRPF 117

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
           + ++LA IEKKM E+  +D    ++  + + A   F+S  E YK EI+ SIPA E ++LY
Sbjct: 118 TPEDLAAIEKKMTELARKDETVTREEWTRDDAVAYFKSIGEDYKAEIIASIPANETLSLY 177

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
           R+G + DLCRGPHV STG++K  FKLMKVAGAYWRGDSN  ML RIYGTAW T+ +   Y
Sbjct: 178 REGNFVDLCRGPHVPSTGKLK-VFKLMKVAGAYWRGDSNNEMLQRIYGTAWATKDDQDAY 236

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEE 293
           L+ LEE+E+RDHRK+ R++DLFH  ++  G+IFWH KGW ++Q +  YMR    D+ Y+E
Sbjct: 237 LHMLEEAERRDHRKIGRDLDLFHFQDEAPGLIFWHPKGWALWQQVEQYMRAVYNDNGYQE 296

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           +  PQ+LD  LW+++GHWD+YR NMF  +  +      R + LKPMNCPGHV +FN GL 
Sbjct: 297 VKAPQILDLSLWKKTGHWDNYRENMFTTESEN------RVYGLKPMNCPGHVQIFNAGLH 350

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYRELP+R  EFG  +RNEPSGSLHG+MRVRGFTQDD H+FCT++Q+ +EC     L+  
Sbjct: 351 SYRELPLRYGEFGQCHRNEPSGSLHGMMRVRGFTQDDGHIFCTEDQLQDECADFTALLQK 410

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           +Y+DFGF +++ K++TRPEKR+GSD +WD AE  +   +++++ +        +  GEGA
Sbjct: 411 VYRDFGFHEVLYKVATRPEKRIGSDDIWDKAETAL---MESLRRTG---CEFEISPGEGA 464

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK EY LKDAIGR WQCGT+QVDF++P R  A YV++  ++  PVM+HRA+ GS+ER
Sbjct: 465 FYGPKIEYTLKDAIGRHWQCGTVQVDFSMPVRLGAEYVDAQDQRRAPVMLHRAILGSLER 524

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           FIG++IEN  G +P WL+P+QA+V  I+  + +YA +I   LK     +++D R E I  
Sbjct: 525 FIGMLIENHAGAMPPWLAPVQAVVCCISEPSADYAAQITQTLKKQGFRVQSDLRGEKITR 584

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
           KIREHS++K+P I++ GDKE    ++ +R  G      ++L D
Sbjct: 585 KIREHSLQKVPYILVVGDKEKQNGTVAVRGLGGLDLGVIALED 627


>gi|330816669|ref|YP_004360374.1| Threonyl-tRNA synthetase [Burkholderia gladioli BSR3]
 gi|327369062|gb|AEA60418.1| Threonyl-tRNA synthetase [Burkholderia gladioli BSR3]
          Length = 635

 Score =  677 bits (1748), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 309/625 (49%), Positives = 437/625 (69%), Gaps = 15/625 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           + +  PDGS++ +    T ++VA SI   LAK A+   ++G++ D S  + R+ S+ I+T
Sbjct: 2   VSIRLPDGSVRQYEHPVTVAEVAASIGPGLAKAALGGKLDGELVDTSALIDRDASLAIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   L +IRHS AH++A AV+ ++PE QV IGP+I++GFYYDF   +PF+ ++L +IE
Sbjct: 62  DKDADGLEIIRHSTAHLLAYAVKELFPEAQVTIGPVIDNGFYYDFSYSRPFTPEDLEKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+MQE+  +D P  ++ +S E+A E F    E YK EI+ESIP+ + + LY  G + DLC
Sbjct: 122 KRMQELAKKDEPVSRRVVSREEAAEYFRGIGEKYKAEIIESIPSSDEIKLYSHGGFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV STG++K  FKLMKVAGAYWRGDS    L RIYGTAW  +++   YL+ LEE+EK
Sbjct: 182 RGPHVPSTGKLK-VFKLMKVAGAYWRGDSKNEQLQRIYGTAWAKKEDQEAYLHMLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKLA+++DLFH+ E+  G++FWH KGW ++Q +  YMRR++ +  Y EI TP ++D+
Sbjct: 241 RDHRKLAKQLDLFHMQEESPGMVFWHPKGWTLWQQVEQYMRRRVNEAGYLEIKTPMIMDR 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW +YR NMF       T  + R +A+KPMNCPGHV VFNHGL+SYR+LP+R 
Sbjct: 301 SLWEASGHWQNYRENMFT------TESEKRDYAIKPMNCPGHVQVFNHGLRSYRDLPLRY 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNE SG+LHGLMRVRGF QDDAH+FCT++Q  +E +  + L +S+YKDFGF++
Sbjct: 355 AEFGSCHRNEASGALHGLMRVRGFVQDDAHIFCTEDQFISESIAFNELAMSVYKDFGFDQ 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I +KLS RP++R G+D  WD AE  ++  L       ++      L GEGAFYGPK EY 
Sbjct: 415 ISIKLSLRPDQRAGTDETWDRAEQGLRDALTACGLEWEE------LPGEGAFYGPKIEYH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+GR WQCGT+Q+D  LP R  A YV   + +  PVM+HRA+ GS+ERF+GI+IE+ 
Sbjct: 469 IKDALGRSWQCGTLQLDMVLPERLGAEYVAEDNSRRRPVMLHRAIVGSMERFLGILIEHH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G +P WL+P+Q +V  I  +  EY + ++  L+   L +E D RNE I+YKIREH+++K
Sbjct: 529 AGAMPSWLAPVQVVVMNIAENQAEYVRSLSQSLQKQGLRVEADLRNEKISYKIREHTLEK 588

Query: 603 IPIIIICGDKEASERSIGIRRFGST 627
           +P +++ GDKE   +++ +R  G  
Sbjct: 589 VPYLLVAGDKEREAQTVAVRARGGV 613


>gi|300311294|ref|YP_003775386.1| threonyl-tRNA synthetase [Herbaspirillum seropedicae SmR1]
 gi|300074079|gb|ADJ63478.1| threonyl-tRNA synthetase protein [Herbaspirillum seropedicae SmR1]
          Length = 635

 Score =  677 bits (1748), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 311/632 (49%), Positives = 438/632 (69%), Gaps = 15/632 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           + +  PDGS + F    T + VA +I   LAK A+A  ++GK+ D S  + ++  + IIT
Sbjct: 2   VSVRLPDGSQRQFDNPVTVAQVAANIGTGLAKAALAGRVDGKLVDTSYLIDKDAELSIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   L VIRHS AH++A AV+ ++PE QV IGP+I++GFYYDF  ++PF+ ++L  IE
Sbjct: 62  DKDADGLEVIRHSTAHLLAYAVKELFPEAQVTIGPVIDNGFYYDFSYKRPFTPEDLQAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           KKM E+  +D P  ++ L  ++A   F+S  E YK EI+ SIP  E+V+LY +G + DLC
Sbjct: 122 KKMAELAKKDEPVTRKVLPRDEAVAYFKSIGEDYKAEIIASIPQNEDVSLYTEGSFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV STG++K  FKLMK+AGAYWRGDSN  ML R+YGTAW  +++   YL+ LEE+EK
Sbjct: 182 RGPHVPSTGKLK-VFKLMKLAGAYWRGDSNNEMLQRVYGTAWAKKEDQEAYLHMLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQ 302
           RDHRKL R +DLFH  ++  G+IFWH KGW I+Q +  YMRR  +D+ Y+E+  PQ+LD+
Sbjct: 241 RDHRKLGRALDLFHFQDEAPGLIFWHPKGWTIWQQVEQYMRRVYQDNGYQEVKAPQILDR 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+++GHW++YR NMF  +  +      R +ALKPMNCPGH+ +FN GL SYR+LP+R 
Sbjct: 301 SLWEKTGHWENYRENMFTTESEN------RAYALKPMNCPGHIQIFNSGLHSYRDLPLRY 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG  +RNEPSG+LHG+MRVRGFTQDD H+FCT++Q+  E    + ++  +Y  FGF++
Sbjct: 355 GEFGQCHRNEPSGALHGMMRVRGFTQDDGHIFCTEDQIQEEVAAFNRVVREVYDCFGFKE 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + VKL+ RPEKR+G++ +WD AEN ++  +    +  ++      L GEGAFYGPK EY 
Sbjct: 415 VAVKLALRPEKRIGAEEVWDKAENALREAIRASGSEWEE------LPGEGAFYGPKIEYH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LKD+IGR WQCGT+QVDF++P+R  A YV   + +  PVM+HRA+ GS+ERFI I+IEN 
Sbjct: 469 LKDSIGRSWQCGTMQVDFSMPARLGAEYVTEDNNRKVPVMLHRAIVGSLERFIAILIENH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G +PLWL+P Q ++  I+ +  +Y Q +A  LK     +ETD RNE I YKIR+HSI+K
Sbjct: 529 AGAMPLWLAPTQVVILNISDAQADYVQNVAQTLKKQGFRVETDLRNEKITYKIRQHSIQK 588

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
            P I++ GDKE    ++ +R  G+     +S+
Sbjct: 589 PPYILVVGDKERDANTVAVRARGNVDLGVMSI 620


>gi|160900048|ref|YP_001565630.1| threonyl-tRNA synthetase [Delftia acidovorans SPH-1]
 gi|238687213|sp|A9C3D4|SYT_DELAS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|160365632|gb|ABX37245.1| threonyl-tRNA synthetase [Delftia acidovorans SPH-1]
          Length = 643

 Score =  677 bits (1748), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 319/619 (51%), Positives = 436/619 (70%), Gaps = 23/619 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAI----NGKVCDLSDPV-REGSI 59
           I +T PDGS + +P   T ++VA SI   LAK A+A  +    + KV D S  + ++  +
Sbjct: 2   IHITLPDGSQREYPGPVTVAEVAASIGTGLAKAALAGKVGTGDDAKVVDTSFVINKDMPL 61

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            I+T +D   L VIRHS AH++A AV+ ++P+ QV IGP+IE+GFYYDF  ++PF+ ++L
Sbjct: 62  SIVTAKDADGLDVIRHSTAHLLAYAVKDLFPDAQVTIGPVIENGFYYDFSYKRPFTPEDL 121

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEK+M E+ A+D P +++ L  ++A   F+   E YK EI+ SIP+ E+V+LYR+G +
Sbjct: 122 VAIEKRMAELAAKDEPVVRRVLPRDEAVAYFKGIGENYKAEIIASIPSNEDVSLYREGSF 181

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV STG++K FFKLMKVAGAYWRGD    ML R+YGTAW ++ +L QYL+ LE
Sbjct: 182 EDLCRGPHVPSTGKLK-FFKLMKVAGAYWRGDHRNEMLQRVYGTAWASKDDLQQYLHMLE 240

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQ 298
           E+EKRDHRKL RE+DLFHI E   G +FWH KGW ++Q +  YMRR  +D+ Y+E+  PQ
Sbjct: 241 EAEKRDHRKLGRELDLFHIDEHSPGTVFWHPKGWSLWQEVEQYMRRVYRDNGYQEVKGPQ 300

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +LD+ LW+++GHWD YR NMF       T  + R +ALKPMNCPGH+ +F  G+KSYR+L
Sbjct: 301 ILDKTLWEKTGHWDKYRENMFT------TESEKRDYALKPMNCPGHILIFKQGIKSYRDL 354

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R  EFG  +RNEP+G LHG+MRVRGFTQDD HVFCT++Q+  E L    L+  +Y DF
Sbjct: 355 PLRYGEFGQCHRNEPTGGLHGIMRVRGFTQDDGHVFCTEDQIQPEVLAFTTLLQKVYADF 414

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF  I+ K++TRPE R+GSD  WD AE     ++++++ S  + +   +  G+GAFYGPK
Sbjct: 415 GFSDIIYKVATRPEARIGSDESWDKAE---AALINSLEASGCEYV---ISPGDGAFYGPK 468

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            EY LKDAIGR WQCGTIQVDF++P R +A YV    ++  PVM+HRA+ GS+ERFIGI+
Sbjct: 469 IEYTLKDAIGRQWQCGTIQVDFSMPERLDAEYVGEDGDRHRPVMLHRAIVGSLERFIGIL 528

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLK----SHHLSIETDFRNETINYK 594
           IE   G +P WL+P+QA V  IT +  +Y +E+A  L+    +  L + TD RNE I YK
Sbjct: 529 IEQHAGAMPTWLAPVQAAVLNITDAQADYVREVAQKLQKAFPNQGLRVATDLRNEKITYK 588

Query: 595 IREHSIKKIPIIIICGDKE 613
           IREHS++K+P I++ GDKE
Sbjct: 589 IREHSLQKLPYILVAGDKE 607


>gi|51473419|ref|YP_067176.1| threonyl-tRNA synthetase [Rickettsia typhi str. Wilmington]
 gi|73919822|sp|Q68XE8|SYT_RICTY RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|51459731|gb|AAU03694.1| Threonine translase [Rickettsia typhi str. Wilmington]
          Length = 635

 Score =  677 bits (1746), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 317/647 (48%), Positives = 445/647 (68%), Gaps = 23/647 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           I ++FPDGS+K F  + T  ++A +IS SLAK A+ V ING+  DLS  +  +  + I+T
Sbjct: 2   INISFPDGSVKQFAQNITAFEIANAISMSLAKAAMVVEINGEFKDLSTVIEHDCKLRILT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   L +IRH  AH+ A AV+ ++PE QVAIGP IE+G+YYDF +++PFS D+LA IE
Sbjct: 62  AKDYECLEIIRHDAAHLTAAAVKELFPETQVAIGPAIENGYYYDFARDKPFSRDDLATIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            KMQE++ ++    ++    +KA E F S  E YK +I+ SIPA E +TLYRQG + DLC
Sbjct: 122 AKMQELVKKNEKITRELWDRDKAIEFFLSIGEHYKAKIIASIPAGEQITLYRQGNFIDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH  STG VK +FKLMKVAGAYWRG+S   ML RIYGTAW T+++L  YL+ LEE+EK
Sbjct: 182 RGPHAPSTGFVK-YFKLMKVAGAYWRGNSRNEMLQRIYGTAWATKEQLDNYLFMLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQ 302
           RDHRK+ +E+DLFH  E+  G++FWH KGW I+ T+  Y+R+K  K+ Y E+ TP ++D+
Sbjct: 241 RDHRKIGKELDLFHFQEEAQGMVFWHDKGWSIYNTIEQYIRKKNRKNGYIEVKTPVLVDK 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW  +R +MF ++  D      +  ALKPMNCP HV +F  G+KSYR+LP+R+
Sbjct: 301 SLWEASGHWAKFRCDMFTLETDD------KILALKPMNCPCHVQIFKQGIKSYRDLPLRM 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           +EFG  +RNE SG+LHGLMRVR   QDDAH+FC +EQ+ +E ++   L+  +YKDFGF  
Sbjct: 355 SEFGLCHRNEASGALHGLMRVRSLVQDDAHIFCAEEQITDETVRFCKLLTEVYKDFGFTD 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL----GEGAFYGPK 478
           I VK S RPE R G+D +WD AE+ +K  ++ +          G +     G+GAFYGPK
Sbjct: 415 IKVKFSDRPEIRAGNDEVWDKAEHALKTAVEKV----------GFIYTLNPGDGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E++L DAIGR WQCGT+Q+DF LP R +A Y+ +  EK  PVM+HRA+ GS+ERFIGI+
Sbjct: 465 LEFVLTDAIGRQWQCGTLQMDFVLPERLDANYIAASGEKKRPVMLHRAILGSLERFIGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE + G  P+WL+P+Q  + TIT+   +YA E+   L  +++  + +   + INYKIRE 
Sbjct: 525 IEEYAGKFPIWLAPVQVAIATITNDLNDYALEVQKTLIDNNIRTDINISPDKINYKIREF 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           S +KIP+I + G KE + + + IR+FG+T  + +S+   I ++ KE+
Sbjct: 585 SNQKIPMIAVIGKKEQANKQVTIRKFGTTGQEILSIEQLIAMIKKEN 631


>gi|237747667|ref|ZP_04578147.1| threonyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
 gi|229379029|gb|EEO29120.1| threonyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
          Length = 635

 Score =  677 bits (1746), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 313/625 (50%), Positives = 431/625 (68%), Gaps = 15/625 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I +  PDGS + F    T S VA SI   LAK A+A  +NGK+ D S  +  +  + I+T
Sbjct: 2   ISVRLPDGSAREFNEPVTVSQVAASIGSGLAKAAIAGKVNGKLVDTSYMIDNDVELSIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
             DP  + ++RHS AH++A AV+ ++P+ QV IGP+I++GFYYDF  ++PF+ ++L  IE
Sbjct: 62  DRDPEGVDILRHSTAHLLAYAVKQLFPDAQVTIGPVIDNGFYYDFSYKRPFTPEDLQAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           KKM E+  ++    ++ L  ++A   F+S  E YK EI+ESIP  E+V+LY  G + DLC
Sbjct: 122 KKMTELARKNEEVTRKVLPRDEAVAYFKSIGEDYKAEIIESIPQNEDVSLYTSGGFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV + G++K  FKLM++AGAYWRG+S+  ML RIYGTAW  +++   YL+ LEE+EK
Sbjct: 182 RGPHVPANGKLK-VFKLMRLAGAYWRGNSDNEMLQRIYGTAWAKKEDQDAYLHMLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQ 302
           RDHR+L R +DLFH  ++  G+IFWH KGW I+Q +  YMRR  +++ Y+E+  PQ+LD+
Sbjct: 241 RDHRRLGRSLDLFHFQDEAPGLIFWHAKGWTIWQQVEQYMRRVYQENGYQEVKGPQILDR 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD+Y+ NMF  +  +      R +ALKPMNCPGHV ++   L SYRELP+R 
Sbjct: 301 SLWEKSGHWDNYKENMFTTESEN------RIYALKPMNCPGHVQIYRSNLHSYRELPLRY 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG  +RNEPSGSLHG+MRVRGFTQDD H+FCT++Q+ +EC+   +L+  +Y+DFGF  
Sbjct: 355 GEFGQCHRNEPSGSLHGMMRVRGFTQDDGHIFCTEDQILDECVAFTDLLKKVYQDFGFTD 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+ K++TRPEKRVGSD  WD AEN +      I++  +   +  +  G+GAFYGPK EY 
Sbjct: 415 IIYKIATRPEKRVGSDEAWDKAENAL------IQSLERSGCSYELSPGDGAFYGPKIEYT 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LKDAIGR WQCGTIQVDF++P R  A YV   + +  PVMIHRA+ GS+ERFIGI+IEN 
Sbjct: 469 LKDAIGRMWQCGTIQVDFSMPMRLGAEYVAEDNTRKIPVMIHRAILGSLERFIGILIENH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G +PLWL+P+ A V  I+ S  EYAQ +   +K      E D RNE I YKIR+HS+ K
Sbjct: 529 AGAMPLWLAPVHATVLNISDSQAEYAQSVVQTMKKAGFRAEVDLRNEKITYKIRDHSVNK 588

Query: 603 IPIIIICGDKEASERSIGIRRFGST 627
           +P +I+ GDKE +  ++ +R  G  
Sbjct: 589 VPYLIVVGDKEKNANTVAVRARGGV 613


>gi|206559848|ref|YP_002230612.1| threonyl-tRNA synthetase [Burkholderia cenocepacia J2315]
 gi|238693072|sp|B4E7I6|SYT_BURCJ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|198035889|emb|CAR51780.1| threonyl-tRNA synthetase [Burkholderia cenocepacia J2315]
          Length = 635

 Score =  676 bits (1745), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 310/625 (49%), Positives = 436/625 (69%), Gaps = 15/625 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           + +  PDGS++ +    T ++VA SI   LAK A+   ++G++ D S  + R+ S+ I+T
Sbjct: 2   VSIRLPDGSVRQYEHPVTVAEVAASIGPGLAKAALGGKLDGELVDTSTVIDRDASLAIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   L +IRHS AH++A AV+ ++P+ QV IGP+I++GFYYDF   +PF+ ++L +IE
Sbjct: 62  DKDADGLDIIRHSTAHLLAYAVKELYPDAQVTIGPVIDNGFYYDFSYNRPFTPEDLEKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+MQE+  +D P  ++ +S ++A   F S  E YK EI+ESIP  + + LY  G + DLC
Sbjct: 122 KRMQELAKKDEPVTRRVVSRDEAAGYFRSIGEKYKAEIIESIPQSDEIKLYSHGGFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV STG++K  FKLMKVAGAYWRGDS    L RIYGTAW  +++  QYL+ LEE+EK
Sbjct: 182 RGPHVPSTGKLK-VFKLMKVAGAYWRGDSKNEQLQRIYGTAWTKKEDQDQYLHMLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ E+  G++FWH KGW ++Q +  YMRR++ +  Y EI TP ++D+
Sbjct: 241 RDHRKLGKQLDLFHMQEESPGMVFWHPKGWALWQQVEQYMRRRVNEAGYLEIKTPMIMDR 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW +YR NMF       T  + R +A+KPMNCPGHV VF HGL+SYR+LP+R 
Sbjct: 301 SLWEASGHWQNYRENMFT------TESEKRDYAIKPMNCPGHVQVFKHGLRSYRDLPLRY 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNE SG+LHGLMRVRGF QDDAH+FCT++Q  +E +  + L +S+YKDFGF+ 
Sbjct: 355 AEFGSCHRNEASGALHGLMRVRGFVQDDAHIFCTEDQFISESIAFNTLAMSVYKDFGFDH 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I +KLS RP++R G+D  WD AE  ++  L     + ++      L GEGAFYGPK EY 
Sbjct: 415 IDIKLSLRPDQRAGTDETWDRAEQGLRDALTACGLTWEE------LPGEGAFYGPKIEYH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+GR WQCGT+Q+D  LP R  A YV   + +  PVM+HRA+ GS+ERF+GI+IE+ 
Sbjct: 469 IKDALGRSWQCGTLQLDMVLPERLGAEYVAEDNSRRRPVMLHRAIVGSMERFLGILIEHH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G +P+WL+P QAIV  I  S  EYAQ +A  L+   + +  D RNE I+YKIREH+++K
Sbjct: 529 AGAMPVWLAPYQAIVLNIAESQAEYAQSLAQSLQKQGVRVAADLRNEKISYKIREHTLEK 588

Query: 603 IPIIIICGDKEASERSIGIRRFGST 627
           +P +++ GDKE   +++ +R  G  
Sbjct: 589 VPYLLVVGDKERDAQTVAVRARGGV 613


>gi|293604689|ref|ZP_06687089.1| threonine--tRNA ligase [Achromobacter piechaudii ATCC 43553]
 gi|292816858|gb|EFF75939.1| threonine--tRNA ligase [Achromobacter piechaudii ATCC 43553]
          Length = 650

 Score =  676 bits (1745), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 315/647 (48%), Positives = 447/647 (69%), Gaps = 20/647 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVA--VAING---KVCDLSDPVR-EGS 58
           +++T PDGS + +P   T ++VA+SI   LAK A+   V   G   K+ D S  +  +  
Sbjct: 2   VQITLPDGSQRQYPGPVTVAEVAQSIGTGLAKAALGGRVTFEGAESKLVDTSFRIEGDAR 61

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           + I+T +D   L +IRHS AH++A AV+ ++P+ QV IGP+I++GFYYDF  ++PF+ ++
Sbjct: 62  LAIVTAKDADGLDLIRHSTAHLLAYAVKELFPDAQVTIGPVIDNGFYYDFSYKRPFTPED 121

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L  IEKKM E+  +D    ++  S + A E F+   E YK EI+ SIP+ E ++LYR+G+
Sbjct: 122 LVAIEKKMAELAKKDEVVTREEWSRDDAVEFFKGIGEKYKAEIIASIPSNEPLSLYREGD 181

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + DLCRGPHV STG++K  FKLMKVAGAYWRGDS   ML RIYGTAW T++E   YL+ L
Sbjct: 182 FIDLCRGPHVPSTGKLK-VFKLMKVAGAYWRGDSKNEMLQRIYGTAWATKEEQEAYLHML 240

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTP 297
           EE+E+RDHRK+ RE+DLFH  ++  G+IFWH KGW ++Q +  YMR    ++ Y+E+  P
Sbjct: 241 EEAERRDHRKIGRELDLFHFQDEAPGLIFWHPKGWALWQQVEQYMRAIYNNNGYQEVKAP 300

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           Q+LD  LW+++GHWD+YR NMF  +  +      R + LKPMNCPGHV +FN GL SYRE
Sbjct: 301 QILDISLWKKTGHWDNYRENMFTTESEN------RVYGLKPMNCPGHVQIFNAGLHSYRE 354

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R  EFG  +RNEPSGSLHG+MRVRGFTQDD H+FCT+EQ+ +EC     L+  +Y+D
Sbjct: 355 LPLRYGEFGQCHRNEPSGSLHGMMRVRGFTQDDGHIFCTEEQLQDECADFTALLQKVYRD 414

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF +++ K++TRPEKR+GSD +WD AE   + ++++++ +        +  GEGAFYGP
Sbjct: 415 FGFTEVLYKVATRPEKRIGSDEVWDTAE---QALMESLRRTG---CEFEISPGEGAFYGP 468

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K EY LKDAIGR WQCGTIQVDF++P R  A YV+ + ++  PVM+HRA+ GS+ERFIG+
Sbjct: 469 KVEYTLKDAIGRHWQCGTIQVDFSMPVRLGAEYVDQNDQRRPPVMLHRAILGSLERFIGM 528

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IEN  G +P WL+P+QA+V  I+  + +YA EI   LK     +E+D R E I  KIRE
Sbjct: 529 LIENHAGAMPPWLAPVQAVVCCISEPSADYAAEITQSLKKQGFRVESDLRGEKITRKIRE 588

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           HS++K+P I++ GDKE    ++ +R  G      ++  + +  L+++
Sbjct: 589 HSLQKVPYILVVGDKEKQNGTVAVRGLGGLDLGAIAYDEFVARLSED 635


>gi|238027731|ref|YP_002911962.1| threonyl-tRNA synthetase [Burkholderia glumae BGR1]
 gi|237876925|gb|ACR29258.1| Threonyl-tRNA synthetase [Burkholderia glumae BGR1]
          Length = 635

 Score =  676 bits (1745), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 310/625 (49%), Positives = 437/625 (69%), Gaps = 15/625 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           + +  PDGS++ +    T ++VA SI   LAK A+   ++G++ D S  +  + S+ I+T
Sbjct: 2   VSIRLPDGSVRQYEHPVTVAEVAASIGPGLAKAALGGKLDGELVDTSALIDHDASLAIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   L +IRHS AH++A AV+ ++PE QV IGP+I++GFYYDF   +PF+ ++LA+IE
Sbjct: 62  DKDADGLDIIRHSAAHLLAYAVKDLYPEAQVTIGPVIDNGFYYDFSYSRPFTPEDLAKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+MQE+  +D P  ++ +S  +A + F    E YK EI+ESIP+ + + LY  G + DLC
Sbjct: 122 KRMQELAKKDEPVSRRVVSRAEAVDYFRGIGEKYKAEIIESIPSSDEIKLYSHGGFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV STG++K  FKLMKVAGAYWRGDS    L RIYGTAW  +++   YL+ LEE+EK
Sbjct: 182 RGPHVPSTGKLK-VFKLMKVAGAYWRGDSKNEQLQRIYGTAWTRKEDQDAYLHMLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKLA+++DLFH+ E+  G++FWH KGW ++Q +  YMRR++ +  Y EI TP ++D+
Sbjct: 241 RDHRKLAKQLDLFHMQEESPGMVFWHPKGWALWQQVEQYMRRRVNEAGYLEIKTPMIMDR 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW +YR NMF       T  + R +A+KPMNCPGHV VFNHGL+SYR+LP+R 
Sbjct: 301 SLWEASGHWQNYRENMFT------TESEKRDYAIKPMNCPGHVQVFNHGLRSYRDLPLRY 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNE SG+LHGLMRVRGF QDDAH+FCT++Q   E +  + L +S+YKDFGF++
Sbjct: 355 AEFGSCHRNEASGALHGLMRVRGFVQDDAHIFCTEDQFIAESIAFNELAMSVYKDFGFDQ 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I +KLS RP++R G+D  WD AE  ++  L     + ++      L GEGAFYGPK EY 
Sbjct: 415 ISIKLSLRPDQRAGTDETWDRAEQGLRDALTACGLAWEE------LPGEGAFYGPKIEYH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+GR WQCGT+Q+D  LP R  A YV   + +  PVM+HRA+ GS+ERF+GI+IE+ 
Sbjct: 469 IKDALGRSWQCGTLQLDMVLPERLGAEYVAEDNGRRRPVMLHRAIVGSMERFLGILIEHH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G +P WL+P+QAIV  I  +  +YA  +A  L+   L +E D RNE I+YKIREH+++K
Sbjct: 529 AGAMPAWLAPVQAIVMNIAENQADYAGSLAQSLQKQGLRVEADLRNEKISYKIREHALEK 588

Query: 603 IPIIIICGDKEASERSIGIRRFGST 627
           +P +++ GDKE   +++ +R  G  
Sbjct: 589 VPYLLVVGDKEREAQTVAVRARGGV 613


>gi|323526736|ref|YP_004228889.1| threonyl-tRNA synthetase [Burkholderia sp. CCGE1001]
 gi|323383738|gb|ADX55829.1| threonyl-tRNA synthetase [Burkholderia sp. CCGE1001]
          Length = 635

 Score =  676 bits (1744), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 308/625 (49%), Positives = 438/625 (70%), Gaps = 15/625 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           + +  PDGS++ +    T ++VA SI   LAK A+   I+G++ D S  + R+ ++ I+T
Sbjct: 2   VSIRLPDGSVRQYEHPVTVAEVAASIGPGLAKAALGGKIDGELVDTSTLIDRDVALAIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   L +IRHS AH++A AV+ ++PE QV IGP+I++GFYYDF   +PF+ ++L +IE
Sbjct: 62  EKDADGLDIIRHSTAHLLAYAVKDLYPEAQVTIGPVIDNGFYYDFAYHRPFTPEDLERIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+MQE+  +D P  ++ +S ++A + F+S  E YK EI+ESIPA + + LY  G + DLC
Sbjct: 122 KRMQELAKKDEPVSRRVVSRDEAVDYFKSIGEKYKAEIIESIPASDEIKLYSHGGFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV STG++K  FKLMKVAGAYWRGDS    L RIYGTAW  +++   YL+ LEE+EK
Sbjct: 182 RGPHVPSTGKLK-VFKLMKVAGAYWRGDSKNEQLQRIYGTAWTKKEDQDAYLHMLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ ++  G++FWH +GW ++Q +  YMRR++ +  Y EI TP ++D+
Sbjct: 241 RDHRKLGKQLDLFHMQDESPGMVFWHPRGWTLWQQVEQYMRRRVNEAGYLEIKTPMIMDR 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW +YR NMF       T  + R +A+KPMNCPGHV VFNHGL+SYR+LP+R 
Sbjct: 301 SLWEASGHWQNYRENMFT------TESEKRDYAIKPMNCPGHVQVFNHGLRSYRDLPLRY 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNE SG+LHGLMRVRGF QDDAH+FCT++Q  +E +  + L +S+YKDFGF+ 
Sbjct: 355 AEFGSCHRNESSGALHGLMRVRGFVQDDAHIFCTEDQFISESIAFNTLAMSVYKDFGFDN 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + +KLS RP+ R G+D  WD AE  ++  L     S ++      L GEGAFYGPK EY 
Sbjct: 415 VEIKLSLRPDARAGTDETWDRAEQGLREALTACGVSWEE------LPGEGAFYGPKVEYH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+GR WQCGT+Q+D  LP R  A YV   + +  P+M+HRA+ GS+ERF+GI+IE+ 
Sbjct: 469 IKDALGRSWQCGTLQLDMVLPERLGAEYVAEDNSRRRPIMLHRAIVGSMERFLGILIEHH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G +P WL+P+Q +V  I  S  EYAQ +A  L+   + +E D RNE I+YKIREH+++K
Sbjct: 529 AGAMPAWLAPMQVVVMNIAESQAEYAQSLAQTLQKQGVRVEADLRNEKISYKIREHTLEK 588

Query: 603 IPIIIICGDKEASERSIGIRRFGST 627
           +P +++ GDKE   +++ +R  G  
Sbjct: 589 VPYLLVVGDKEREAQTVAVRARGGV 613


>gi|167587363|ref|ZP_02379751.1| threonyl-tRNA synthetase [Burkholderia ubonensis Bu]
          Length = 635

 Score =  676 bits (1744), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 311/625 (49%), Positives = 435/625 (69%), Gaps = 15/625 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           + +  PDGS++ +    T ++VA SI   LAK A+   ++G++ D S  + R+ S+ I+T
Sbjct: 2   VSIRLPDGSVRQYEHPVTVAEVAASIGPGLAKAALGGKLDGELVDTSAVIDRDASLAIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   L +IRHS AH++A AV+ ++P+ QV IGP+I++GFYYDF   +PF+ ++L +IE
Sbjct: 62  DKDADGLDIIRHSTAHLLAYAVKELYPDAQVTIGPVIDNGFYYDFSYHRPFTPEDLEKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+MQEI  +D P  ++ +S ++A   F S  E YK EI+ESIP  + + LY  G + DLC
Sbjct: 122 KRMQEIAKKDEPVTRRVVSRDEAAGYFRSIGEKYKAEIIESIPQSDEIKLYSHGGFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV STG++K  FKLMKVAGAYWRGDS    L RIYGTAW  +++  QYL+ LEE+EK
Sbjct: 182 RGPHVPSTGKLK-VFKLMKVAGAYWRGDSKNEQLQRIYGTAWTKKEDQDQYLHMLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ E+  G++FWH KGW ++Q +  YMRR++ +  Y EI TP ++D+
Sbjct: 241 RDHRKLGKQLDLFHMQEESPGMVFWHPKGWALWQQVEQYMRRRVNEAGYLEIKTPMIMDR 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW +YR NMF       T  + R +A+KPMNCPGHV VF HGL+SYR+LP+R 
Sbjct: 301 SLWEASGHWQNYRENMFT------TESEKRDYAIKPMNCPGHVQVFKHGLRSYRDLPLRY 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNE SG+LHGLMRVRGF QDDAH+FCT++Q  +E +  + L +S+YKDFGF+ 
Sbjct: 355 AEFGSCHRNEASGALHGLMRVRGFVQDDAHIFCTEDQFISESIAFNTLAMSVYKDFGFDH 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I +KLS RP++R G+D  WD AE  ++  L     + ++      L GEGAFYGPK EY 
Sbjct: 415 IDIKLSLRPDQRAGTDETWDRAEQGLRDALTACGLAWEE------LPGEGAFYGPKIEYH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+GR WQCGT+Q+D  LP R  A YV   + +  PVM+HRA+ GS+ERF+GI+IE+ 
Sbjct: 469 IKDALGRSWQCGTLQLDMVLPERLGAEYVAEDNSRRRPVMLHRAIVGSMERFLGILIEHH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G +P+WL+P QAIV  I  S  EYAQ +A  L+   +    D RNE I+YKIREH+++K
Sbjct: 529 AGAMPVWLAPFQAIVLNIAESQAEYAQSLAQTLQKQGVRAAADLRNEKISYKIREHTLEK 588

Query: 603 IPIIIICGDKEASERSIGIRRFGST 627
           +P +++ GDKE   +++ +R  G  
Sbjct: 589 VPYLLVVGDKERDAQTVAVRARGGV 613


>gi|163746007|ref|ZP_02153366.1| threonyl-tRNA synthetase [Oceanibulbus indolifex HEL-45]
 gi|161380752|gb|EDQ05162.1| threonyl-tRNA synthetase [Oceanibulbus indolifex HEL-45]
          Length = 648

 Score =  676 bits (1744), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 323/653 (49%), Positives = 432/653 (66%), Gaps = 10/653 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           + I LT PDG+ + +    T  +VA  IS+SL KKA++  +NG   DL+ P+  +  I I
Sbjct: 2   AQISLTLPDGNSRQYDAGITAGEVAADISKSLGKKAISATVNGAHFDLAWPIEADADIAI 61

Query: 62  ITPEDP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            T  D  ++  ++RH  AHIMA AVQ IWP+ +V IGP+I+DG+YYDFD+++PF+ ++L 
Sbjct: 62  HTMADEVQANELVRHDLAHIMARAVQEIWPDTKVTIGPVIKDGWYYDFDRKEPFTPEDLG 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEKKM+EII +      +     +A + +E   E YKVE++ +IP  E + +Y  G+W 
Sbjct: 122 AIEKKMKEIINKRDAVRTEVWDRARAIKHYEDLNEPYKVELINAIPGDEPLRMYWHGDWQ 181

Query: 181 DLCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           DLCRGPH++ TGQV    FKLM +AGAYWRGDS+R ML RIYG A+  +++L  +L  LE
Sbjct: 182 DLCRGPHLQHTGQVPGDAFKLMSIAGAYWRGDSDRAMLQRIYGVAFTGKEKLRAHLNMLE 241

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+ KRDHRKL REMDLFH+ E+  G IFWH  GW I+  L  YMRR+  K  Y E+NTPQ
Sbjct: 242 EAAKRDHRKLGREMDLFHMQEEAPGQIFWHPNGWSIYTQLQDYMRRQQRKGGYVEVNTPQ 301

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW+ SGHW+ Y+ +MF V+  ++  ++    ALKPMNCP HV +FN GLKSYR+L
Sbjct: 302 VVDRKLWEASGHWEKYQDHMFIVEVDEEHAREKAVNALKPMNCPCHVQIFNQGLKSYRDL 361

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFGS  R EPSG+LHG+MRVRGFTQDD H+FC ++Q+  E  K    +  IY+D 
Sbjct: 362 PLRMAEFGSCNRYEPSGALHGIMRVRGFTQDDGHIFCAEDQIEAETAKFIAFLSEIYRDL 421

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE   VK S RPEKR GSD +WD AE  +      +  +    I   +  GEGAFYGPK
Sbjct: 422 GFENFKVKFSDRPEKRSGSDEVWDKAEAAL------LSATRAAGIEPELNPGEGAFYGPK 475

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E++L DAIGRDWQCGT QVDF LP R +A Y+ +   K  PVM+HRA  GS ERFIGI+
Sbjct: 476 LEFVLTDAIGRDWQCGTHQVDFVLPERLDATYIGADGGKHRPVMLHRATLGSFERFIGIL 535

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE   G LP WL+P Q +V +ITS A +Y  E+   LK+  +  E D RNE INYK+REH
Sbjct: 536 IEEHAGKLPFWLAPRQVVVASITSEADDYVAEVVETLKAAGVRAEADMRNEKINYKVREH 595

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           S+ K+P+I+  G +E  ER++ +RR G   T    L      L +++ PPD +
Sbjct: 596 SVGKVPVILAVGAREVEERTVSVRRLGQKQTSVQPLDTLTAELAQDATPPDLR 648


>gi|325197939|gb|ADY93395.1| threonyl-tRNA synthetase [Neisseria meningitidis G2136]
          Length = 637

 Score =  676 bits (1743), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 305/621 (49%), Positives = 438/621 (70%), Gaps = 15/621 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           + +T PDGS++ +    T + +A SI   LAK AVA  +NGK+ D  DP+ E S ++IIT
Sbjct: 2   LNITLPDGSVRQYESPVTVAQIAASIGAGLAKAAVAGRVNGKLVDACDPIVEDSAVQIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A IE
Sbjct: 62  PKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M+E+IA+D   +K      +A ++F+ + E YK+ +++ +P  E + +Y   E+ D+C
Sbjct: 122 ARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLIDDMPEVEAMGMYHHQEYVDMC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+EK
Sbjct: 182 RGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKAYIQRIEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ ++  G++FWH KGW ++Q +  +MR+++    Y+E+ TPQ++D+
Sbjct: 241 RDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDK 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             W++SGHWD+Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+RL
Sbjct: 301 TFWEKSGHWDNYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRL 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF  
Sbjct: 355 AEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFHD 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + VKLS RPEKR GSD +WD AE  ++  L          +  G L GEGAFYGPK EY 
Sbjct: 415 VSVKLSLRPEKRAGSDDVWDKAEQGLREALTACG------VEWGELPGEGAFYGPKIEYH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+GR WQCGT+Q+DF LP R +A YV  ++++  PVM+HRA+ GS+ERFIGI+IEN 
Sbjct: 469 VKDALGRSWQCGTLQLDFVLPERLDAEYVTENNDRARPVMLHRAILGSLERFIGILIENH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G+ PLWL+P+Q ++  IT +  +Y +E+A  L++    +E D RNE I YKIR++S  +
Sbjct: 529 AGSFPLWLAPVQLVIMNITENQADYCREVAAKLQAAGFRVELDLRNEKIGYKIRDNSQYR 588

Query: 603 IPIIIICGDKEASERSIGIRR 623
            P  I+ GDKE  E  + +RR
Sbjct: 589 FPYQIVVGDKEKQENKVAVRR 609


>gi|330819285|ref|YP_004348147.1| threonyl-tRNA synthetase [Burkholderia gladioli BSR3]
 gi|327371280|gb|AEA62635.1| threonyl-tRNA synthetase [Burkholderia gladioli BSR3]
          Length = 682

 Score =  676 bits (1743), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 312/647 (48%), Positives = 438/647 (67%), Gaps = 14/647 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           I LT PDGS + F    T ++VA +I   LA+ AVA  ++G++ DL D +  +  + +IT
Sbjct: 21  IDLTLPDGSHRGFATGTTVAEVAAAIGPGLARHAVAGELDGRLVDLGDAIEHDARLRVIT 80

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P D   LA+IRHSCAH++  AV+ ++P+  + IGP+IEDGFYYD    +PF+ ++LA IE
Sbjct: 81  PADEEGLAIIRHSCAHLLGHAVKQLYPDANMVIGPVIEDGFYYDIAYPRPFTPEDLAAIE 140

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           ++M+E+I  D   +K+ L  E+A  LF  + EAYK+ ++E++P    + LY   E+ D+C
Sbjct: 141 QRMRELIDLDYEVIKRVLPREEAIRLFRERGEAYKLRLIEAMPEVAAMNLYFHQEYVDMC 200

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +T +  K FKL ++AGAYWRGD+  P L RIYGTAW   ++L  +L  LE++E+
Sbjct: 201 RGPHVPNT-RFLKAFKLTRLAGAYWRGDARNPQLQRIYGTAWADARQLAAHLERLEQAER 259

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQ 302
           RDHR+L RE+DLFH  ED  G +FWH +GW +F+ LI+YMRR+ ++  Y E+N+P V+D+
Sbjct: 260 RDHRRLGRELDLFHFQEDAPGAVFWHPRGWTVFRELIAYMRRRQEEAAYVEVNSPDVMDR 319

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW +YR +MF         +D R+ ALKPMNCPG V ++ HGLKSYR+LP+R+
Sbjct: 320 SLWEISGHWLNYRDHMFTT-----ATEDGRSLALKPMNCPGSVLLYRHGLKSYRDLPIRM 374

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG V+R EPSG+LHGL+RVR FTQDDAH++CT  QM  EC  +  L++ IY+ FGFE+
Sbjct: 375 GEFGKVHRYEPSGALHGLLRVRHFTQDDAHIYCTPAQMDQECRAVVALVLDIYRQFGFEE 434

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + +KLSTRP  R+G +A WD  E  +   LD +      R+N G    EGAFYGPK E++
Sbjct: 435 VRIKLSTRPANRMGDEATWDRLEGALVNALDAMGLDY--RLNPG----EGAFYGPKLEFV 488

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+DAIGRDWQCGT+QVD NLP RF   YV+   ++  PVM+HRA+FGS+ERFIGI+IE+ 
Sbjct: 489 LRDAIGRDWQCGTLQVDMNLPERFGIEYVDEDGQRKRPVMLHRALFGSLERFIGILIEHH 548

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G LP WL+P+QA+V +I+    +YA+ +A  L +  L  E D R E I YKIRE ++++
Sbjct: 549 AGKLPPWLAPVQAMVLSISEEHADYARNVAQWLAASGLRAEADLRREKIGYKIREQTLQR 608

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPD 649
           IP +++ G +E    SI IR  G      + L  A+ +L  E   PD
Sbjct: 609 IPFLLVAGTRERETGSIAIRSRGGLDLGTLPLAQAVALLVDECQAPD 655


>gi|162218055|ref|YP_620875.2| threonyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
 gi|162227933|ref|YP_835120.2| threonyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
 gi|254245609|ref|ZP_04938930.1| Threonyl-tRNA synthetase, class IIa [Burkholderia cenocepacia
           PC184]
 gi|124870385|gb|EAY62101.1| Threonyl-tRNA synthetase, class IIa [Burkholderia cenocepacia
           PC184]
          Length = 635

 Score =  676 bits (1743), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 309/625 (49%), Positives = 435/625 (69%), Gaps = 15/625 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           + +  PDGS++ +    T ++VA SI   LAK A+   ++G++ D S  + R+ S+ I+T
Sbjct: 2   VSIRLPDGSVRQYEHPVTVAEVAASIGPGLAKAALGGKLDGELVDTSTVIDRDASLAIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   L +IRHS AH++A AV+ ++P+ QV IGP+I++GFYYDF   +PF+ ++L +IE
Sbjct: 62  DKDADGLDIIRHSTAHLLAYAVKELYPDAQVTIGPVIDNGFYYDFSYNRPFTPEDLEKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+MQE+  +D P  ++ +S ++A   F S  E YK EI+ESIP  + + LY  G + DLC
Sbjct: 122 KRMQELAKKDEPVTRRVVSRDEAAGYFRSIGEKYKAEIIESIPQSDEIKLYSHGGFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV STG++K  FKLMKVAGAYWRGDS    L RIYGTAW  +++  QYL+ LEE+EK
Sbjct: 182 RGPHVPSTGKLK-VFKLMKVAGAYWRGDSKNEQLQRIYGTAWTKKEDQDQYLHMLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ E+  G++FWH KGW ++Q +  YMRR++ +  Y EI TP ++D+
Sbjct: 241 RDHRKLGKQLDLFHMQEESPGMVFWHPKGWALWQQVEQYMRRRVNEAGYLEIKTPMIMDR 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW +YR NMF       T  + R +A+KPMNCPGHV VF HGL+SYR+LP+R 
Sbjct: 301 SLWEASGHWQNYRENMFT------TESEKRDYAIKPMNCPGHVQVFKHGLRSYRDLPLRY 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNE SG+LHGLMRVRGF QDDAH+FCT++Q  +E +  + L +S+YKDFGF+ 
Sbjct: 355 AEFGSCHRNEASGALHGLMRVRGFVQDDAHIFCTEDQFISESIAFNTLAMSVYKDFGFDH 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I +KLS RP++R G+D  WD AE  ++  L     + ++      L GEGAFYGPK EY 
Sbjct: 415 IDIKLSLRPDQRAGTDETWDRAEQGLRDALTACGLTWEE------LPGEGAFYGPKIEYH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+GR WQCGT+Q+D  LP R  A YV   + +  PVM+HRA+ GS+ERF+GI+IE+ 
Sbjct: 469 IKDALGRSWQCGTLQLDMVLPERLGAEYVAEDNSRRRPVMLHRAIVGSMERFLGILIEHH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G +P+WL+P QAIV  I  S  EYAQ +   L+   + +  D RNE I+YKIREH+++K
Sbjct: 529 AGAMPVWLAPYQAIVLNIAESQAEYAQSLTQTLQKQGVRVAADLRNEKISYKIREHTLEK 588

Query: 603 IPIIIICGDKEASERSIGIRRFGST 627
           +P +++ GDKE   +++ +R  G  
Sbjct: 589 VPYLLVVGDKERDAQTVAVRARGGV 613


>gi|308388909|gb|ADO31229.1| putative threonyl-tRNA synthetase [Neisseria meningitidis alpha710]
 gi|325202484|gb|ADY97938.1| threonyl-tRNA synthetase [Neisseria meningitidis M01-240149]
 gi|325207764|gb|ADZ03216.1| threonyl-tRNA synthetase [Neisseria meningitidis NZ-05/33]
          Length = 637

 Score =  675 bits (1742), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 305/621 (49%), Positives = 437/621 (70%), Gaps = 15/621 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           + +T PDGS++ +    T + +A SI   LAK AVA  +NGK+ D  DP+ E S ++IIT
Sbjct: 2   LNITLPDGSVRQYESPVTVAQIAASIGAGLAKAAVAGRVNGKLVDACDPIVEDSAVQIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A IE
Sbjct: 62  PKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M+E+IA+D   +K      +A ++F+ + E YK+ +++ +P  E + +Y   E+ D+C
Sbjct: 122 ARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLIDDMPEVEAMGMYHHQEYVDMC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+EK
Sbjct: 182 RGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKAYIQRIEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ ++  G++FWH KGW ++Q +  +MR+++    Y+E+ TPQ++D+
Sbjct: 241 RDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDK 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             W++SGHWD+Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+RL
Sbjct: 301 TFWEKSGHWDNYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRL 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF  
Sbjct: 355 AEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFHD 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + VKLS RPEKR GSD +WD AE  ++  L          +  G L GEGAFYGPK EY 
Sbjct: 415 VSVKLSLRPEKRAGSDDVWDKAEQGLREALTACG------VEWGELPGEGAFYGPKIEYH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           ++DA+GR WQCGT+Q+DF LP R NA YV  ++++  PVM+HRA+ GS+ERFIGI+IEN 
Sbjct: 469 VRDALGRSWQCGTLQLDFVLPERLNAEYVTENNDRARPVMLHRAILGSLERFIGILIENH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G+ PLWL+P+Q ++  IT +  +Y +E+A  L++     E D RNE I YKIR++S  +
Sbjct: 529 AGSFPLWLAPVQMVIMNITENQADYCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQYR 588

Query: 603 IPIIIICGDKEASERSIGIRR 623
            P  I+ GDKE  E  + +RR
Sbjct: 589 FPYQIVVGDKEKQENKVAVRR 609


>gi|297250596|ref|ZP_06864620.2| threonine--tRNA ligase [Neisseria polysaccharea ATCC 43768]
 gi|296838509|gb|EFH22447.1| threonine--tRNA ligase [Neisseria polysaccharea ATCC 43768]
          Length = 648

 Score =  675 bits (1742), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 305/621 (49%), Positives = 437/621 (70%), Gaps = 15/621 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           + +T PDGS++ +    T + +A SI   LAK  VA  +NGK+ D  DP+ E S ++IIT
Sbjct: 13  LNITLPDGSVRQYESPVTVAQIAASIGAGLAKATVAGKVNGKLVDACDPIVEDSAVQIIT 72

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A IE
Sbjct: 73  PKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAIE 132

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M+E+IA+D   +K      +A ++F+ + E YK+ +++ +P  E + +Y   E+ D+C
Sbjct: 133 ARMKELIAQDYDVIKIMTPRAEAIKIFQERGEEYKLRLIDDMPEVEAMGMYHHQEYVDMC 192

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+EK
Sbjct: 193 RGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKAYIQRIEEAEK 251

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ ++  G++FWH KGW ++Q +  +MR+++    Y+E+ TPQ++D+
Sbjct: 252 RDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDK 311

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             W++SGHW++Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+RL
Sbjct: 312 TFWEKSGHWENYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRL 365

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF  
Sbjct: 366 AEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFHD 425

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + VKLS RPEKR GSD +WD AE  ++  L          +  G L GEGAFYGPK EY 
Sbjct: 426 VSVKLSLRPEKRAGSDDVWDKAEQGLREALTACG------VEWGELPGEGAFYGPKIEYH 479

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+GR WQCGT+Q+DF LP R NA YV  ++++  PVM+HRA+ GS+ERFIGI+IEN 
Sbjct: 480 VKDALGRSWQCGTLQLDFVLPERLNAEYVTENNDRARPVMLHRAILGSLERFIGILIENH 539

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G+ PLWL+PIQ ++  IT +  +Y +E+A  L++    +E D RNE I YKIR++S  +
Sbjct: 540 AGSFPLWLAPIQMVIMNITENQADYCREVAAKLQAAGFRVELDLRNEKIGYKIRDNSQYR 599

Query: 603 IPIIIICGDKEASERSIGIRR 623
            P  I+ GDKE  E  + +RR
Sbjct: 600 FPYQIVVGDKEKQENKVAVRR 620


>gi|209516675|ref|ZP_03265528.1| threonyl-tRNA synthetase [Burkholderia sp. H160]
 gi|209502950|gb|EEA02953.1| threonyl-tRNA synthetase [Burkholderia sp. H160]
          Length = 635

 Score =  675 bits (1742), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 308/625 (49%), Positives = 438/625 (70%), Gaps = 15/625 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           + +  PDGS++ +    T ++VA SI   LAK A+   I+G++ D S  + R+ ++ I+T
Sbjct: 2   VSIRLPDGSVRQYEHPVTVAEVAASIGPGLAKAALGGKIDGELVDTSALIDRDVALAIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   L +IRHS AH++A AV+ ++PE QV IGP+I++GFYYDF   +PF+ ++L +IE
Sbjct: 62  EKDADGLDIIRHSTAHLLAYAVKDLYPEAQVTIGPVIDNGFYYDFSYNRPFTPEDLERIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+MQE+  +D P  ++ +S ++A E F+S  E YK EI+ESIPA + + LY  G + DLC
Sbjct: 122 KRMQELAKKDEPVSRRVVSRDEAVEYFKSIGEKYKAEIIESIPASDEIKLYSHGGFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV STG++K  FKLMKVAGAYWRGDS    L RIYGTAW  +++   YL+ LEE+EK
Sbjct: 182 RGPHVPSTGKLK-VFKLMKVAGAYWRGDSKNEQLQRIYGTAWTKKEDQEAYLHMLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ ++  G++FWH +GW ++Q +  YMRR++ D  Y EI TP ++D+
Sbjct: 241 RDHRKLGKQLDLFHMQDESPGMVFWHPRGWTLWQQVEQYMRRRVNDAGYLEIKTPLIMDR 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW +YR NMF       T  + R +A+KPMNCPGHV VFNHGL+SYR+LP+R 
Sbjct: 301 SLWEASGHWQNYRENMFT------TESEKRDYAIKPMNCPGHVQVFNHGLRSYRDLPLRY 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNE SG+LHGLMRVRGF QDDAH+FCT++Q  +E +  + L +S+Y+DFGF+ 
Sbjct: 355 AEFGSCHRNESSGALHGLMRVRGFVQDDAHIFCTEDQFISESIAFNTLAMSVYRDFGFDN 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + +KLS RP+ R G+D  WD AE  ++  L     + ++      L GEGAFYGPK EY 
Sbjct: 415 VEIKLSLRPDARAGTDETWDRAEQGLREALTACGVTWEE------LPGEGAFYGPKVEYH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+GR WQCGT+Q+D  LP R  A YV   + +  P+M+HRA+ GS+ERF+GI+IE+ 
Sbjct: 469 IKDALGRSWQCGTLQLDMVLPERLGAEYVAEDNSRRRPIMLHRAIVGSMERFLGILIEHH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G +P WL+P+Q +V  I  S  EYAQ +A  L+   + +E D RNE I+YKIREH+++K
Sbjct: 529 AGAMPAWLAPMQVVVMNIAESQAEYAQLLAQSLQKQGVRVEADLRNEKISYKIREHTLEK 588

Query: 603 IPIIIICGDKEASERSIGIRRFGST 627
           +P +++ GDKE   +++ +R  G  
Sbjct: 589 VPYLLVVGDKEREAQTVAVRARGGV 613


>gi|254491441|ref|ZP_05104620.1| threonyl-tRNA synthetase [Methylophaga thiooxidans DMS010]
 gi|224462919|gb|EEF79189.1| threonyl-tRNA synthetase [Methylophaga thiooxydans DMS010]
          Length = 641

 Score =  675 bits (1742), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 308/642 (47%), Positives = 448/642 (69%), Gaps = 15/642 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I +T PDGS + F    T  D+A  I   LA+ A+A  +NG + D S  V ++  + I+T
Sbjct: 2   ISVTLPDGSQRQFDNPVTIHDIAADIGTGLARAALAGKVNGTLVDTSHVVEQDADVAIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
             D   L +IRHS +H+MA+AV+ ++PE QV IGP+I+DGFYYDF   + F+ D+L +I+
Sbjct: 62  ERDEEGLDIIRHSTSHLMAQAVKQLYPEAQVTIGPVIDDGFYYDFSYPEAFTPDDLNKIQ 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M+EI+ +D P  ++ ++ +   E+F    E YK EILE IP  E +++YRQG++ DLC
Sbjct: 122 KRMEEIVKQDLPVAREEITRDAGIEMFRDMGEIYKAEILEDIPKDEILSVYRQGDFVDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +TG++K F KLMK+AGAYWRG+S+  ML R+YGTAW  ++ L QYL+ LEE+EK
Sbjct: 182 RGPHVPNTGKLKAF-KLMKLAGAYWRGNSDNEMLQRVYGTAWQDKKALKQYLHRLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRK+A+ +DLFH+ E+ +G+IFWH  GW+I++ + +Y+R  ++D DY+E+ TPQV+D+
Sbjct: 241 RDHRKIAKNLDLFHLQEEAAGMIFWHDNGWQIYRVVENYIRDVLRDNDYQEVRTPQVVDR 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD +   +F+    +      R +A+KPMNCP H+ +FN GLKSYR+LP+R+
Sbjct: 301 TLWEKSGHWDKFGDMIFSTHSEN------RDYAVKPMNCPCHIQIFNQGLKSYRDLPLRM 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHGLMR+RGFTQDDAH+FCT++Q+ +E      L+  +Y DFGF +
Sbjct: 355 AEFGSCHRNEPSGTLHGLMRLRGFTQDDAHIFCTEDQIQSEVATFIELLHEVYADFGFNE 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+VKLSTRPE RVGSD +WD AE  ++  L+         ++  +  GEGAFYGPK E+ 
Sbjct: 415 IIVKLSTRPENRVGSDEVWDKAEKALEDALNAAD------LDWELQPGEGAFYGPKIEFS 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LKD + R WQCGTIQVDF++P R +A +V   + K  PVM+HRA+ GS+ERFIGI+IE +
Sbjct: 469 LKDCLSRVWQCGTIQVDFSMPGRLDAHFVADDNSKQVPVMLHRAILGSLERFIGILIEEY 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P Q +V  I+    EY Q++A  L+     ++TD RNE I +KIREH++++
Sbjct: 529 AGAFPTWLAPKQVMVMGISDKQSEYVQKVAKDLQKQGFRVDTDLRNEKIGFKIREHTLRR 588

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P +I+ G++EA + ++ +R         + L D + +L K+
Sbjct: 589 VPYLIVVGEREAQDNAVAVRTRKGEDLGAMQLEDFVGLLEKD 630


>gi|89053589|ref|YP_509040.1| threonyl-tRNA synthetase [Jannaschia sp. CCS1]
 gi|88863138|gb|ABD54015.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Jannaschia sp.
           CCS1]
          Length = 648

 Score =  675 bits (1741), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 318/634 (50%), Positives = 428/634 (67%), Gaps = 10/634 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
           + I LTFPDG+ +++    T + VA  IS SLAKKA++  ++G   DL  P+  +  I I
Sbjct: 2   AQISLTFPDGNARSYDAGITPAAVAADISNSLAKKAISATVDGAHHDLQWPIDADAQIAI 61

Query: 62  IT-PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            T  +D ++L +IRH CAHIMA AVQ IWP+V+V IGP+ + G++YDFD+ +PF+ ++L 
Sbjct: 62  HTLKDDDQALELIRHDCAHIMARAVQEIWPDVKVTIGPVRDKGWFYDFDRPEPFTPEDLG 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IE KM+EII        +    ++ R  +E+  E YK+E+L+ IP  E + +Y  G+W 
Sbjct: 122 AIEAKMKEIINARDAVRTEIWDRDRVRAHYEATDEPYKIELLDRIPGDEPIRMYWHGDWQ 181

Query: 181 DLCRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           D+CRGPH++ TGQV    FKLM VA AYW GD+ RPML RIYG A+  + +L +YL FLE
Sbjct: 182 DMCRGPHLQHTGQVPADAFKLMSVAAAYWLGDNTRPMLQRIYGVAFKNRDDLRKYLNFLE 241

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+EKRDHR+L REMDL+H+ E+  G +FWH  GW I+ TL  YMRRK + D Y E+NTPQ
Sbjct: 242 EAEKRDHRRLGREMDLYHMQEEAPGQVFWHPNGWTIYTTLQDYMRRKQRADGYVEVNTPQ 301

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHWD Y+ +MF V+  ++  +     ALKPMNCP HV VFN GLKSYR+L
Sbjct: 302 VVDRALWEKSGHWDKYQEHMFIVEVDEEHAQTKAINALKPMNCPCHVEVFNQGLKSYRDL 361

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFGS  R EPSG+LHG+MRVRGFTQDDAH+FCT++Q+  EC K    +  +YKD 
Sbjct: 362 PLRMAEFGSCSRYEPSGALHGIMRVRGFTQDDAHIFCTEDQIEAECAKFITFLSGVYKDL 421

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE   +  +TRPEKRVG+D  WD  E  ++  + ++ N  +      +  G+GAFYGPK
Sbjct: 422 GFESFDIAFATRPEKRVGTDEAWDHVEGALEAAIKSVGNPYR------IEEGDGAFYGPK 475

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++ L DAIGR WQCGT QVD NLP R  A YV    +K  P M+HRA  GS ERFIGI+
Sbjct: 476 LDFYLTDAIGRVWQCGTFQVDPNLPERLGASYVGQDGDKHRPYMLHRACLGSFERFIGIL 535

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IEN +G LP WL+P Q +V +I S A E+  E+   LK+  +  E D RNE INYK+REH
Sbjct: 536 IENSEGRLPFWLAPRQVVVASIVSDADEFVHEVVAALKATGIRAEADTRNEKINYKVREH 595

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
           S+ K+P I+  G +E   R++ +RR G   T+ V
Sbjct: 596 SVGKVPAILAIGKQEVENRTVTLRRLGEKQTRVV 629


>gi|325136057|gb|EGC58667.1| threonyl-tRNA synthetase [Neisseria meningitidis M0579]
          Length = 643

 Score =  675 bits (1741), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 305/621 (49%), Positives = 437/621 (70%), Gaps = 15/621 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           + +T PDGS++ +    T + +A SI   LAK AVA  +NGK+ D  DP+ E S ++IIT
Sbjct: 8   LNITLPDGSVRQYESPVTVAQIAASIGAGLAKAAVAGRVNGKLVDACDPIVEDSAVQIIT 67

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A IE
Sbjct: 68  PKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAIE 127

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M+E+IA+D   +K      +A ++F+ + E YK+ +++ +P  E + +Y   E+ D+C
Sbjct: 128 ARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLIDDMPEVEAMGMYHHQEYVDMC 187

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+EK
Sbjct: 188 RGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKAYIQRIEEAEK 246

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ ++  G++FWH KGW ++Q +  +MR+++    Y+E+ TPQ++D+
Sbjct: 247 RDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDK 306

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             W++SGHWD+Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+RL
Sbjct: 307 TFWEKSGHWDNYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRL 360

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF  
Sbjct: 361 AEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFHD 420

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + VKLS RPEKR GSD +WD AE  ++  L          +  G L GEGAFYGPK EY 
Sbjct: 421 VSVKLSLRPEKRAGSDDVWDKAEQGLREALTACG------VEWGELPGEGAFYGPKIEYH 474

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           ++DA+GR WQCGT+Q+DF LP R NA YV  ++++  PVM+HRA+ GS+ERFIGI+IEN 
Sbjct: 475 VRDALGRSWQCGTLQLDFVLPERLNAEYVTENNDRARPVMLHRAILGSLERFIGILIENH 534

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G+ PLWL+P+Q ++  IT +  +Y +E+A  L++     E D RNE I YKIR++S  +
Sbjct: 535 AGSFPLWLAPVQMVIMNITENQADYCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQYR 594

Query: 603 IPIIIICGDKEASERSIGIRR 623
            P  I+ GDKE  E  + +RR
Sbjct: 595 FPYQIVVGDKEKQENKVAVRR 615


>gi|157803434|ref|YP_001491983.1| threonyl-tRNA synthetase [Rickettsia canadensis str. McKiel]
 gi|166225493|sp|A8EXW5|SYT_RICCK RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|157784697|gb|ABV73198.1| threonyl-tRNA synthetase [Rickettsia canadensis str. McKiel]
          Length = 635

 Score =  675 bits (1741), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 321/643 (49%), Positives = 438/643 (68%), Gaps = 15/643 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           I ++  DGS++ F    T  +VA +IS SLAK+A+   ING++ DLS  +     + I+T
Sbjct: 2   INISLSDGSVRQFEKGMTIYEVANAISMSLAKQAIVAEINGELKDLSTVIENNCKLRILT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +DP  L +IRH  AH+ AEAV+ ++PE QV IGP IE+G+YYDF +++PF+ D+LA IE
Sbjct: 62  AKDPECLEIIRHDAAHLTAEAVKELFPETQVTIGPAIENGYYYDFARDKPFTVDDLAVIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            KMQE+  ++    ++  + +KA E F S  E YK EI+ SIP  E +TLYRQG + DLC
Sbjct: 122 AKMQELAKKNEKVTRELWNRDKAIEFFRSIGEHYKAEIIASIPTDEPITLYRQGNFIDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH  STG VK +FKLMKVAG+YWRGDS   +L RIYGTAW T+++L  YL+ LEE+EK
Sbjct: 182 RGPHAPSTGFVK-YFKLMKVAGSYWRGDSRNQVLQRIYGTAWATKEQLDHYLFMLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQ 302
           RDHRKL RE+DLFH  E+  G++FWH KGW I+  +  Y+R+KI K+ Y E+ TP ++D+
Sbjct: 241 RDHRKLGRELDLFHFQEEAQGMVFWHDKGWSIYNIVEQYIRKKIRKNGYTEVKTPVLVDK 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW+ +R NMFA++       D +  ALKPMNCP HV +F  G+KSYR+LP+R+
Sbjct: 301 RLWEASGHWEKFRDNMFALEA------DNKILALKPMNCPCHVQIFKQGIKSYRDLPLRM 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           +EFG  +RNE SG+LHGLMRVR   QDDAH+FC +EQ+ +E +    L+  +YKDFGF  
Sbjct: 355 SEFGLCHRNEASGALHGLMRVRSLVQDDAHIFCAEEQITDETVSFCKLLTEVYKDFGFTD 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I VK S RPE R GSD +WD AEN +K  ++  K      +N G    EGAFYGPK E++
Sbjct: 415 IKVKFSDRPEIRAGSDEVWDKAENALKEAVE--KAGFTYTLNPG----EGAFYGPKLEFV 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L DAIGR WQCGT+Q+DF L  + +A YV +  EK  PVM+HRA+ GS+ERFIGI+IE +
Sbjct: 469 LTDAIGRQWQCGTLQMDFVLLEQLDASYVAASGEKKRPVMLHRAILGSLERFIGILIEEY 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  PLWL+P+Q  + TITS   +YA  +   L  + +  + +   + INYKIRE S  K
Sbjct: 529 AGCFPLWLAPVQVAIATITSDLNDYALAVQKALIDNGVRTDINISPDKINYKIREFSNHK 588

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           +P+I I G KE   + + IRR G+T  Q +S+   I ++++E+
Sbjct: 589 VPLIAIIGKKEKENKQVTIRRLGTTDQQVLSVKQLITLISEEN 631


>gi|30248961|ref|NP_841031.1| thrS; threonyl-tRNA synthetase (threonine--tRNA ligase) protein
           [Nitrosomonas europaea ATCC 19718]
 gi|73919810|sp|Q82VV1|SYT_NITEU RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|30138578|emb|CAD84869.1| thrS; threonyl-tRNA synthetase (threonine--tRNA ligase) protein
           [Nitrosomonas europaea ATCC 19718]
          Length = 635

 Score =  674 bits (1740), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 319/616 (51%), Positives = 433/616 (70%), Gaps = 15/616 (2%)

Query: 9   FPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPEDP 67
            PDG+ + F    T  +VAESIS  LA+ A+A  +NGK+ DLS+ +   S + +IT +D 
Sbjct: 6   LPDGTDRVFDNSVTVREVAESISPGLARAALAGKLNGKLVDLSEQIETDSDLVLITDKDS 65

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQ 127
             L +IRHSCAH++A AV+ ++P  QV IGP+IE+GFYYDF  E+PF+ ++L  IEK+MQ
Sbjct: 66  EGLEIIRHSCAHLLAHAVKELFPGTQVTIGPVIENGFYYDFSYERPFTPEDLVAIEKRMQ 125

Query: 128 EIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPH 187
           EI  R     ++     +A   F+   E YK +I+ESIP  E V+LY QG++ DLCRGPH
Sbjct: 126 EISKRALKIERKVWDRSRAINFFKDIGEHYKAQIIESIPDNEPVSLYSQGDFTDLCRGPH 185

Query: 188 VRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHR 247
           V  T ++K  FKLMK+AGAYWRGDS   ML RIYGTAW + +E   YL  LEE+EKRDHR
Sbjct: 186 VPYTSKIK-VFKLMKIAGAYWRGDSKNEMLQRIYGTAWVSNEEQNNYLRCLEEAEKRDHR 244

Query: 248 KLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHLWQ 306
           KL +++DLFH  E+  G+++WH KGW ++Q +  YMR+ +  + Y EI TPQVLD+ LW+
Sbjct: 245 KLGKQLDLFHTQEEAPGMVYWHPKGWVVWQQIEQYMRQTLAGNGYVEIRTPQVLDRSLWE 304

Query: 307 QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFG 366
            SGHW+++R NMF  +  +      R +A+KPMNCPGHV VFNHGL+SYR+LP+RLAEFG
Sbjct: 305 SSGHWENFRENMFITESEN------RHYAIKPMNCPGHVQVFNHGLRSYRDLPLRLAEFG 358

Query: 367 SVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK 426
           S +RNE SG+LHGLMRVR FTQDDAH+FCT++Q+  E  K  +L+  +Y +FGF + ++K
Sbjct: 359 SCHRNEASGALHGLMRVRSFTQDDAHIFCTEDQILGEVTKFIDLLNQVYINFGFSETLIK 418

Query: 427 LSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDA 486
           LSTRP KRVG++  WD AE  +   L+      Q  +N  V  GEGAFYGPK E+ LKD+
Sbjct: 419 LSTRPLKRVGTEDQWDKAETALATALN------QKELNWEVQPGEGAFYGPKIEFTLKDS 472

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNL 546
           +GR WQCGT+Q+DF++P+R  A Y+   + +  PVM+HRA+ GS+ERFIGI+IE+  G L
Sbjct: 473 LGRKWQCGTLQLDFSMPARLGAGYIAEDNTRKIPVMLHRAILGSMERFIGILIEHHAGAL 532

Query: 547 PLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPII 606
           PLWLSP Q I+  I+ +  EYAQ I + LK   +   +D RNE I+YKIREHS++KIP +
Sbjct: 533 PLWLSPEQVIILNISRNQAEYAQLITDELKQSGIRASSDLRNEKISYKIREHSMQKIPYL 592

Query: 607 IICGDKEASERSIGIR 622
           ++ GDKE   R++ +R
Sbjct: 593 MVVGDKEMENRTVTVR 608


>gi|187924732|ref|YP_001896374.1| threonyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
 gi|238689588|sp|B2SZG2|SYT_BURPP RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|187715926|gb|ACD17150.1| threonyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
          Length = 635

 Score =  674 bits (1740), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 307/625 (49%), Positives = 438/625 (70%), Gaps = 15/625 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           + +  PDGS++ +    T ++VA SI   LAK A+   I+G++ D S  +  + ++ I+T
Sbjct: 2   VSIRLPDGSVRQYEHPVTVAEVAASIGPGLAKAALGGKIDGELVDTSALIDHDVALAIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   L +IRHS AH++A AV+ ++PE QV IGP+I++GFYYDF   +PF+ ++L +IE
Sbjct: 62  EKDADGLDIIRHSTAHLLAYAVKDLYPEAQVTIGPVIDNGFYYDFAYNRPFTPEDLEKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+MQE+  +D P  ++ +S ++A + F+S  E YK EI+ESIPA +++ LY  G + DLC
Sbjct: 122 KRMQELAKKDEPVSRRVVSRDEAVDYFKSIGEKYKAEIIESIPATDDIKLYSHGGFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV STG++K  FKLMKVAGAYWRGDS    L RIYGTAW  +++   YL+ LEE+EK
Sbjct: 182 RGPHVPSTGKLK-VFKLMKVAGAYWRGDSKNEQLQRIYGTAWTKKEDQEAYLHMLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ ++  G++FWH +GW ++Q +  YMRR++ D  Y EI TP ++D+
Sbjct: 241 RDHRKLGKQLDLFHMQDESPGMVFWHPRGWTLWQQVEQYMRRRVNDAGYLEIKTPMIMDR 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW +YR NMF       T  + R +A+KPMNCPGHV VFNHGL+SYR+LP+R 
Sbjct: 301 SLWEASGHWQNYRENMFT------TESEKRDYAIKPMNCPGHVQVFNHGLRSYRDLPLRY 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNE SG+LHGLMRVRGF QDDAH+FCT++Q  +E +  + L +S+YKDFGF+ 
Sbjct: 355 AEFGSCHRNESSGALHGLMRVRGFVQDDAHIFCTEDQFISESIAFNTLAMSVYKDFGFDN 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + +KLS RP+ R G+D  WD AE  ++  L     + ++      L GEGAFYGPK EY 
Sbjct: 415 VEIKLSLRPDARAGTDETWDRAEQGLREALTACGVTWEE------LPGEGAFYGPKVEYH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+GR WQCGT+Q+D  LP R  A YV   + +  P+M+HRA+ GS+ERF+GI+IE+ 
Sbjct: 469 IKDALGRSWQCGTLQLDMVLPERLGAEYVAEDNSRRRPIMLHRAIVGSMERFLGILIEHH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G +P WL+P+Q +V  I  S  EYAQ +A  L+   + +E D RNE I+YKIREH+++K
Sbjct: 529 AGAMPAWLAPMQVVVMNIAESQAEYAQSLAQSLQKQGVRVEADLRNEKISYKIREHTLEK 588

Query: 603 IPIIIICGDKEASERSIGIRRFGST 627
           +P +++ GDKE   +++ +R  G  
Sbjct: 589 VPYLLVVGDKEREAQTVAVRARGGV 613


>gi|313668802|ref|YP_004049086.1| threonyl-tRNA synthetase [Neisseria lactamica ST-640]
 gi|313006264|emb|CBN87726.1| putative threonyl-tRNA synthetase [Neisseria lactamica 020-06]
          Length = 637

 Score =  674 bits (1740), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 303/621 (48%), Positives = 438/621 (70%), Gaps = 15/621 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           + +T PDGS++ +    T + +A S+   LAK AVA  +NGK+ D  DP+ E  S++IIT
Sbjct: 2   LNITLPDGSVRQYESPVTVAQIAASVGAGLAKAAVAGKVNGKLVDACDPITEDSSVQIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A IE
Sbjct: 62  PKDREGVEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M+E+IA+D   +K      +A ++F+ + E YK+ +++ +P  E + +Y   E+ D+C
Sbjct: 122 ARMKELIAQDYDVIKIMTPRAEAVKIFQDRGEEYKLRLIDDMPEVEAMGMYHHQEYVDMC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+EK
Sbjct: 182 RGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKAYIRRIEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ ++  G++FWH KGW ++Q +  +MR+++    Y+E+ TPQ++D+
Sbjct: 241 RDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQAVEQHMRKELNAAGYKEVKTPQIMDK 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             W++SGHW++Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+RL
Sbjct: 301 TFWEKSGHWENYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRL 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF  
Sbjct: 355 AEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFHD 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + VKLS RPEKR GSD +WD AE  ++  L       ++      L GEGAFYGPK EY 
Sbjct: 415 VSVKLSLRPEKRAGSDEVWDKAEQGLREALTACGVEWEE------LPGEGAFYGPKIEYH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+GR WQCGT+Q+DF LP R NA YV  ++++  PVM+HRA+ GS+ERFIGI+IEN 
Sbjct: 469 VKDALGRSWQCGTLQLDFVLPERLNAEYVTENNDRARPVMLHRAILGSLERFIGILIENH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G+ PLWL+P+Q ++  IT +  +Y +E+A  L++    +E D RNE I YKIR++S  +
Sbjct: 529 AGSFPLWLAPVQMVIMNITENQADYCREVAARLQAAGFRVELDLRNEKIGYKIRDNSQYR 588

Query: 603 IPIIIICGDKEASERSIGIRR 623
            P  I+ GDKE  E  + +RR
Sbjct: 589 FPYQIVVGDKEKQENKVAVRR 609


>gi|225076640|ref|ZP_03719839.1| hypothetical protein NEIFLAOT_01690 [Neisseria flavescens
           NRL30031/H210]
 gi|224952046|gb|EEG33255.1| hypothetical protein NEIFLAOT_01690 [Neisseria flavescens
           NRL30031/H210]
          Length = 643

 Score =  674 bits (1740), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 302/621 (48%), Positives = 437/621 (70%), Gaps = 15/621 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           + +T PDGS++ +    T + +A SI   LAK  VA  +NGK+ D  DP+ E + ++IIT
Sbjct: 8   LNITLPDGSVRQYESPVTVAQIAASIGAGLAKATVAGKVNGKLVDACDPITEDAHVQIIT 67

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+D   + +IRHSCAH++  AV+ ++P+ ++ IGP+IEDGFYYD   E+PF+ D++A IE
Sbjct: 68  PKDKEGVEIIRHSCAHLVGHAVKQLYPDAKMVIGPVIEDGFYYDIATEKPFTPDDVAAIE 127

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M+E+IA+D   +K      +  ++F+ + E YK+ ++E +P  E + +Y   E+ D+C
Sbjct: 128 ARMKELIAQDYDVIKVMTPRAETVKIFQDRGEEYKLRLIEDMPEVEAMGMYHHQEYVDMC 187

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW ++ EL  Y+  +EE+EK
Sbjct: 188 RGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWASKDELKAYIQRIEEAEK 246

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ ++  G++FWH KGW ++Q +  +MR+++    Y+E+ TPQ++D+
Sbjct: 247 RDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQVIEQHMRKELNVAGYKEVKTPQIMDK 306

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             W++SGHW++Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+RL
Sbjct: 307 TFWEKSGHWENYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRL 360

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF  
Sbjct: 361 AEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVDEARAFNELLVRIYKQFGFHD 420

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + VKLS RPE+R GSD +WD AE  ++  L       ++      L GEGAFYGPK EY 
Sbjct: 421 VAVKLSLRPEQRAGSDEVWDKAEQGLRDALTACGVEWEE------LPGEGAFYGPKIEYH 474

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+GR WQCGT+Q+DF LP R NA YV  ++++  PVM+HRA+ GS+ERFIGI+IEN 
Sbjct: 475 VKDALGRSWQCGTLQLDFVLPERLNAEYVTENNDRARPVMLHRAILGSLERFIGILIENH 534

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G+ PLWL+P+Q ++  IT +  +Y +E+A  L++    +E D RNE I YKIR++S  +
Sbjct: 535 AGSFPLWLAPVQMVIMNITENQADYCREVAAKLQAAGFRVELDLRNEKIGYKIRDNSQYR 594

Query: 603 IPIIIICGDKEASERSIGIRR 623
            P  I+ GDKE  E  + +RR
Sbjct: 595 FPYQIVVGDKEKQENKVAVRR 615


>gi|319637847|ref|ZP_07992613.1| threonyl-tRNA synthetase [Neisseria mucosa C102]
 gi|317401002|gb|EFV81657.1| threonyl-tRNA synthetase [Neisseria mucosa C102]
          Length = 637

 Score =  674 bits (1740), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 302/621 (48%), Positives = 437/621 (70%), Gaps = 15/621 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           + +T PDGS++ +    T + +A SI   LAK  VA  +NGK+ D  DP+ E + ++IIT
Sbjct: 2   LNITLPDGSVRQYESPVTVAQIAASIGAGLAKATVAGKVNGKLVDACDPITEDAHVQIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+D   + +IRHSCAH++  AV+ ++P+ ++ IGP+IEDGFYYD   E+PF+ D++A IE
Sbjct: 62  PKDKEGVEIIRHSCAHLVGHAVKQLYPDAKMVIGPVIEDGFYYDIATEKPFTPDDVAAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M+E+IA+D   +K      +  ++F+ + E YK+ ++E +P  E + +Y   E+ D+C
Sbjct: 122 ARMKELIAQDYDVVKVMTPRAETIKIFQDRGEEYKLRLIEDMPEVEAMGMYHHQEYVDMC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW ++ EL  Y+  +EE+EK
Sbjct: 182 RGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWASKDELKAYIQRIEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ ++  G++FWH KGW ++Q +  +MR+++    Y+E+ TPQ++D+
Sbjct: 241 RDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDK 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             W++SGHW++Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+RL
Sbjct: 301 TFWEKSGHWENYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRL 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF  
Sbjct: 355 AEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVDEARAFNELLVRIYKQFGFHD 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + VKLS RPE+R GSD +WD AE  ++  L       ++      L GEGAFYGPK EY 
Sbjct: 415 VAVKLSLRPEQRAGSDEVWDKAEQGLRDALTACGVEWEE------LPGEGAFYGPKIEYH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+GR WQCGT+Q+DF LP R NA YV  ++++  PVM+HRA+ GS+ERFIGI+IEN 
Sbjct: 469 VKDALGRSWQCGTLQLDFVLPERLNAEYVTENNDRARPVMLHRAILGSLERFIGILIENH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G+ PLWL+P+Q ++  IT +  +Y +E+A  L++    +E D RNE I YKIR++S  +
Sbjct: 529 AGSFPLWLAPVQMVIMNITENQADYCREVAAKLQAAGFRVELDLRNEKIGYKIRDNSQYR 588

Query: 603 IPIIIICGDKEASERSIGIRR 623
            P  I+ GDKE  E  + +RR
Sbjct: 589 FPYQIVVGDKEKQENKVAVRR 609


>gi|167836852|ref|ZP_02463735.1| threonyl-tRNA synthetase [Burkholderia thailandensis MSMB43]
          Length = 635

 Score =  674 bits (1740), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 311/625 (49%), Positives = 433/625 (69%), Gaps = 15/625 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           + +  PDGS++ +    T ++VA SI   LAK A+   ++G++ D S  + R+ S+ I+T
Sbjct: 2   VSIRLPDGSVRQYEHPVTVAEVAASIGPGLAKAALGGKLDGELVDTSALIDRDASLAIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   L +IRHS AH++A AV+ + P+ QV IGP+I++GFYYDF   +PF+ ++L QIE
Sbjct: 62  DKDADGLDIIRHSTAHLLAYAVKELHPDAQVTIGPVIDNGFYYDFSYHRPFTPEDLEQIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+MQE+  RD P  ++ +S ++A   F S  E YK EI+ESIP  + + LY  G + DLC
Sbjct: 122 KRMQELAKRDEPVTRRVVSRDEAVSYFRSIGEKYKAEIIESIPVSDEIKLYSHGGFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV STG++K  FKLMKVAGAYWRGDS    L RIYGTAW  +++   YL+ LEE+EK
Sbjct: 182 RGPHVPSTGKLK-VFKLMKVAGAYWRGDSKNEQLQRIYGTAWTKKEDQDAYLHMLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ E+  G++FWH KGW ++Q +  YMRR++    Y EI TP ++D+
Sbjct: 241 RDHRKLGKQLDLFHLQEESPGMVFWHPKGWTLWQQVEQYMRRRLDAAGYLEIKTPMIMDR 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW +YR NMF       T  + R +A+KPMNCPGHV VF HGL+SYR+LP+R 
Sbjct: 301 SLWEASGHWQNYRENMFT------TESEKRDYAIKPMNCPGHVQVFKHGLRSYRDLPLRY 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNE SG+LHGLMRVRGF QDDAH+FCT++Q+ +E +  + L +S+Y DFGF++
Sbjct: 355 AEFGSCHRNEASGALHGLMRVRGFVQDDAHIFCTEDQINSEAIAFNKLAMSVYADFGFDR 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I +KLS RPE+R+GSD  WD AE  ++  L       ++      L GEGAFYGPK EY 
Sbjct: 415 IDIKLSLRPEQRMGSDETWDHAEEGLRNALKACGLEWEE------LPGEGAFYGPKIEYH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+GR WQCGT+Q+D  LP R  A YV   + +  PVM+HRA+ GS+ERF+GI+IE+ 
Sbjct: 469 IKDALGRSWQCGTLQLDMMLPERLGAEYVAEDNSRRRPVMLHRAIVGSMERFLGILIEHH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G +P+WL+P  A+V  I  S  EYAQ +A  L+   L +  D RNE I+YKIREH+++K
Sbjct: 529 AGAMPVWLAPAHAVVLNIAESQAEYAQTVAQSLQKQGLRVSADLRNEKISYKIREHTLEK 588

Query: 603 IPIIIICGDKEASERSIGIRRFGST 627
           +P +++ GDKE   +++ +R  G  
Sbjct: 589 VPYLLVVGDKEREAQTVAVRARGGV 613


>gi|295677048|ref|YP_003605572.1| threonyl-tRNA synthetase [Burkholderia sp. CCGE1002]
 gi|295436891|gb|ADG16061.1| threonyl-tRNA synthetase [Burkholderia sp. CCGE1002]
          Length = 635

 Score =  674 bits (1740), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 307/625 (49%), Positives = 436/625 (69%), Gaps = 15/625 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           + +  PDGS++ +    T ++VA SI   LAK A+   I+G++ D S  + R+ ++ I+T
Sbjct: 2   VSIRLPDGSVRQYEHPVTVAEVAASIGPGLAKAALGGKIDGELVDTSALIDRDVALAIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   L +IRHS AH++A AV+ ++PE QV IGP+I++GFYYDF   +PF+ ++L +IE
Sbjct: 62  EKDADGLDIIRHSTAHLLAYAVKDLYPEAQVTIGPVIDNGFYYDFSYNRPFTPEDLEKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+MQE+  +D P  ++ +S ++A E F+   E YK EI+ESIPA + + LY  G + DLC
Sbjct: 122 KRMQELAKKDEPVSRRVVSRDEAVEYFKGIGEKYKAEIIESIPAGDEIKLYSHGGFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV STG++K  FKLMKVAGAYWRGDS    L RIYGTAW  +++   YL+ LEE+EK
Sbjct: 182 RGPHVPSTGKLK-VFKLMKVAGAYWRGDSKNEQLQRIYGTAWTKKEDQEAYLHMLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ ++  G++FWH +GW ++Q +  YMRR++ D  Y EI TP ++D+
Sbjct: 241 RDHRKLGKQLDLFHMQDESPGMVFWHPRGWTLWQQVEQYMRRRVNDAGYLEIKTPLIMDR 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW +YR NMF       T  + R +A+KPMNCPGHV VFNHGL+SYR+LP+R 
Sbjct: 301 SLWEASGHWQNYRENMFT------TESEKRDYAIKPMNCPGHVQVFNHGLRSYRDLPLRY 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNE SG+LHGLMRVRGF QDDAH+FCT++Q   E +  + L +S+Y+DFGF+ 
Sbjct: 355 AEFGSCHRNESSGALHGLMRVRGFVQDDAHIFCTEDQFIGESIAFNTLAMSVYRDFGFDN 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + +KLS RP+ R G+D  WD AE  ++  L     + ++      L GEGAFYGPK EY 
Sbjct: 415 VEIKLSLRPDARAGTDETWDRAEQGLREALTACGVTWEE------LPGEGAFYGPKVEYH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+GR WQCGT+Q+D  LP R  A YV   + +  P+M+HRA+ GS+ERF+GI+IE+ 
Sbjct: 469 IKDALGRSWQCGTLQLDMVLPERLGAEYVAEDNSRRRPIMLHRAIVGSMERFLGILIEHH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G +P WL+P+Q +V  I  S  EYAQ +A  L+   + +E D RNE I+YKIREH+++K
Sbjct: 529 AGAMPAWLAPMQVVVMNIAESQAEYAQSLAQSLQKQGVRVEADLRNEKISYKIREHTLEK 588

Query: 603 IPIIIICGDKEASERSIGIRRFGST 627
           +P +++ GDKE   +++ +R  G  
Sbjct: 589 VPYLLVVGDKEREAQTVAVRARGGV 613


>gi|300691315|ref|YP_003752310.1| threonine tRNA synthetase [Ralstonia solanacearum PSI07]
 gi|299078375|emb|CBJ51025.1| threonine tRNA synthetase [Ralstonia solanacearum PSI07]
          Length = 635

 Score =  674 bits (1739), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 317/625 (50%), Positives = 434/625 (69%), Gaps = 15/625 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           I +T PDGS + FP   T ++VA+SI   LAK A+A  I+G++ D S  + +   + I+T
Sbjct: 2   IAITLPDGSRREFPGPVTVAEVAQSIGAGLAKAALAGRIDGQLVDTSFKIEQNVDLAIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   L VIRHS AH++A AV+ ++P+ QV IGP+IE+GFYYDF  ++PF+ ++L  IE
Sbjct: 62  DKDADGLDVIRHSTAHLLAYAVKELYPDAQVTIGPVIENGFYYDFAYKRPFTPEDLVAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M E+  +D    ++    ++A +LFE   E YK EI+ SIP  + + LYR+G + DLC
Sbjct: 122 KRMAELAKKDEKVTREVWRRDEAVKLFEGMGERYKAEIIASIPEDQEIGLYREGSFVDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV STG++K  FKLMKVAGAYWRGDSN  ML RIYGTAW  +++   YL+ LEE+EK
Sbjct: 182 RGPHVPSTGKLK-VFKLMKVAGAYWRGDSNNEMLQRIYGTAWAKKEDQEAYLHMLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ E+  G++FWH KGW+I+Q +  YMR ++ +  Y E+ TPQV+D+
Sbjct: 241 RDHRKLGKQLDLFHLQEEAPGMVFWHPKGWEIWQAVEQYMRGRLSNAGYREVRTPQVMDR 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW +Y+ NMF       T  + R +A+KPMNCPGHV +FNHGL+SYR+LP+RL
Sbjct: 301 TLWEHSGHWQNYKENMFV------TESEKREYAIKPMNCPGHVQIFNHGLRSYRDLPLRL 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFG+ +RNEPSG+LHGLMRVRGF QDDAH+FCT+ Q+  E    ++L  S+Y+DFGFE 
Sbjct: 355 AEFGACHRNEPSGALHGLMRVRGFVQDDAHIFCTEGQIMAEARDFNDLAFSVYEDFGFEN 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + VKL+ RP+KR G+D +WD AE  ++  L       ++      L GEGAFYGPK EY 
Sbjct: 415 VAVKLALRPDKRAGTDDIWDHAEEGLRTALRACGVEWEE------LPGEGAFYGPKVEYH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDAIGR WQCGT+Q+D  LP R  A YV   + +  PVM+HRA+ GS ERF+GI++EN 
Sbjct: 469 IKDAIGRSWQCGTLQLDLVLPERLGAEYVAEDNSRKRPVMLHRAILGSFERFLGILLENH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G LPLWL+P Q +V +I  +  EYAQ +A  L+        D RNE I YKIREHS++K
Sbjct: 529 AGALPLWLAPEQVVVMSIADAHAEYAQSVAQSLQKQGFRASADLRNEKITYKIREHSLQK 588

Query: 603 IPIIIICGDKEASERSIGIRRFGST 627
           +P +++ GDKE     + +R  G+ 
Sbjct: 589 VPYLVVVGDKERDGNQVAVRARGNV 613


>gi|167582118|ref|ZP_02374992.1| threonyl-tRNA synthetase [Burkholderia thailandensis TXDOH]
          Length = 635

 Score =  674 bits (1739), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 312/624 (50%), Positives = 433/624 (69%), Gaps = 15/624 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           + +  PDGSI+ +    T ++VA SI   LAK A+   ++G++ D S  + R+ S+ I+T
Sbjct: 2   VSIRLPDGSIRQYEHPVTVAEVAASIGPGLAKAALGGKLDGELVDTSALIDRDASLAIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   L +IRHS AH++A AV+ + P+ QV IGP+I++GFYYDF   +PF+ ++L  IE
Sbjct: 62  DKDADGLDIIRHSTAHLLAYAVKELHPDAQVTIGPVIDNGFYYDFSYHRPFTPEDLEAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+MQE+  RD P  ++ +S ++A   F S  E YK EI+ESIPA + + LY  G + DLC
Sbjct: 122 KRMQELAKRDEPVTRRVVSRDEAVSYFRSIGEKYKAEIIESIPASDEIKLYSHGGFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV STG++K  FKLMKVAGAYWRGDS    L RIYGTAW  +++   YL+ LEE+EK
Sbjct: 182 RGPHVPSTGKLK-VFKLMKVAGAYWRGDSKNEQLQRIYGTAWTKKEDQDAYLHMLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQ 302
           RDHRKL +++DLFHI E+  G++FWH KGW ++Q +  YMRR++    Y EI TP ++D+
Sbjct: 241 RDHRKLGKQLDLFHIQEEAPGMVFWHPKGWTLWQQVEQYMRRRLDAAGYLEIKTPMIMDR 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW +YR NMF       T  + R +A+KPMNCPGHV VF HGL+SYR+LP+R 
Sbjct: 301 SLWEASGHWQNYRENMFT------TESEKRDYAIKPMNCPGHVQVFKHGLRSYRDLPLRY 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNE SG+LHGLMRVRGF QDDAH+FCT++Q+ +E +  + L +S+Y+DFGF++
Sbjct: 355 AEFGSCHRNEASGALHGLMRVRGFVQDDAHIFCTEDQINSEAIAFNKLAMSVYEDFGFDR 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I +KLS RPE+R+GSD  WD AE  ++  L       ++      L GEGAFYGPK EY 
Sbjct: 415 IDIKLSLRPEQRMGSDETWDHAEEGLRNALKACGLEWEE------LPGEGAFYGPKIEYH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+GR WQCGT+Q+D  LP R  A YV   + +  PVM+HRA+ GS+ERF+GI+IE+ 
Sbjct: 469 IKDALGRSWQCGTLQLDMMLPERLGAEYVAEDNSRRRPVMLHRAIVGSMERFLGILIEHH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G +P+WL+P  A+V  I  S  EYAQ +   L+   L +  D RNE I+YKIREH+++K
Sbjct: 529 AGAMPVWLAPFHAVVLNIAESQAEYAQTVVQSLQKQGLRVSADLRNEKISYKIREHTLEK 588

Query: 603 IPIIIICGDKEASERSIGIRRFGS 626
           +P +++ GDKE   +++ +R  G 
Sbjct: 589 VPYLLVVGDKEREAQTVAVRARGG 612


>gi|17546296|ref|NP_519698.1| threonyl-tRNA synthetase [Ralstonia solanacearum GMI1000]
 gi|22654118|sp|Q8XZ29|SYT_RALSO RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|17428593|emb|CAD15279.1| probable threonyl-trna synthetase (threonine--trna ligase) protein
           [Ralstonia solanacearum GMI1000]
          Length = 635

 Score =  674 bits (1739), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 321/640 (50%), Positives = 440/640 (68%), Gaps = 21/640 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           I +T PDGS + FP   T ++VA+SI   LAK A+A  I+G++ D S  + +   + I+T
Sbjct: 2   IAITLPDGSRREFPGPVTVAEVAQSIGAGLAKAALAGRIDGQLVDTSFRIEQNVDLAIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   L VIRHS AH++A AV+ ++PE QV IGP+IE+GFYYDF  ++PF+ ++L  IE
Sbjct: 62  DKDTDGLDVIRHSTAHLLAYAVKELYPEAQVTIGPVIENGFYYDFAYKRPFTPEDLVAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M E+  +D    ++  S + A +LFE   E YK EI+ SIP  + + LYR+G + DLC
Sbjct: 122 KRMAELAKKDEKVTREVWSRDDAVKLFEGMGEKYKAEIIASIPEDQEIGLYREGNFVDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV STG++K  FKLMKVAGAYWRGDSN  ML RIYGTAW  +++   YL+ LEE+EK
Sbjct: 182 RGPHVPSTGKLK-VFKLMKVAGAYWRGDSNNEMLQRIYGTAWAKKEDQEAYLHMLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL + +DLFH+ E+  G++FWH KGW+I+Q +  YMR ++    Y E+ TPQV+D+
Sbjct: 241 RDHRKLGKLLDLFHLQEEAPGMVFWHPKGWQIWQAVEQYMRGRLAGAGYSEVRTPQVMDR 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHW++Y+ NMF       T  + R +A+KPMNCPGHV +FNHGL+SYR+LP+RL
Sbjct: 301 GLWERSGHWENYKENMFV------TESEKREYAIKPMNCPGHVQIFNHGLRSYRDLPLRL 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFG+ +RNEPSG+LHGLMRVRGF QDDAH+FCT+ Q+  E    ++L  SIY+DFGFE 
Sbjct: 355 AEFGACHRNEPSGALHGLMRVRGFVQDDAHIFCTEGQIMAEAKDFNDLAFSIYEDFGFEN 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + VKL+ RP+KR G+D +WD AE  ++  L       ++      L GEGAFYGPK EY 
Sbjct: 415 VAVKLALRPDKRAGTDEIWDHAEEGLRTALRACGVEWEE------LPGEGAFYGPKVEYH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDAIGR WQCGT+Q+D  LP R  A YV   + +  PVM+HRA+ GS ERF+GI++EN 
Sbjct: 469 IKDAIGRSWQCGTLQLDLVLPERLGAEYVAEDNSRKRPVMLHRAILGSFERFLGILLENH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G LPLWL+P Q ++ +I  +  EYA+ +A  L+        D RNE I YKIREHS++K
Sbjct: 529 AGALPLWLAPEQVVIMSIADAHAEYAESVAQSLQKQGFRASADLRNEKITYKIREHSLQK 588

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +P +++ GDKE     + +R  G+        L ++P+ T
Sbjct: 589 VPYLVVVGDKERDGNQVAVRARGNVD------LGSMPVST 622


>gi|15676618|ref|NP_273762.1| threonyl-tRNA synthetase [Neisseria meningitidis MC58]
 gi|22654143|sp|Q9K095|SYT_NEIMB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|7225946|gb|AAF41133.1| threonyl-tRNA synthetase [Neisseria meningitidis MC58]
 gi|325140125|gb|EGC62654.1| threonyl-tRNA synthetase [Neisseria meningitidis CU385]
 gi|325200596|gb|ADY96051.1| threonyl-tRNA synthetase [Neisseria meningitidis H44/76]
          Length = 637

 Score =  674 bits (1739), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 305/621 (49%), Positives = 436/621 (70%), Gaps = 15/621 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           + +T PDGS++ +    T + +A SI   LAK  VA  +NGK+ D  DP+ E S ++IIT
Sbjct: 2   LNITLPDGSVRQYESPVTVAQIAASIGAGLAKATVAGRVNGKLVDACDPIVEDSAVQIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A IE
Sbjct: 62  PKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M+E+IA+D   +K      +A ++F+ + E YK+ +++ +P  E + +Y   E+ D+C
Sbjct: 122 ARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLIDDMPEVEAMGMYHHQEYVDMC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+EK
Sbjct: 182 RGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKAYIQRIEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ ++  G++FWH KGW ++Q +  +MR+++    Y+E+ TPQ++D+
Sbjct: 241 RDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDK 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             W++SGHWD+Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+RL
Sbjct: 301 TFWEKSGHWDNYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRL 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L+I IYK FGF  
Sbjct: 355 AEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLIRIYKQFGFHD 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + VKLS RPEKR GSD +WD AE  ++  L          +  G L GEGAFYGPK EY 
Sbjct: 415 VSVKLSLRPEKRAGSDDVWDKAEQGLREALTACG------VEWGELPGEGAFYGPKIEYH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           ++DA+GR WQCGT+Q+DF LP R NA YV  ++++  PVM+HRA+ GS+ERFIGI+IEN 
Sbjct: 469 VRDALGRSWQCGTLQLDFVLPERLNAEYVTENNDRARPVMLHRAILGSLERFIGILIENH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G+ PLWL+P+Q ++  IT +  +Y +E+A  L++     E D RNE I YKIR++S  +
Sbjct: 529 AGSFPLWLAPVQLVIMNITENQADYCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQYR 588

Query: 603 IPIIIICGDKEASERSIGIRR 623
            P  I+ GDKE  E  + +RR
Sbjct: 589 FPYQIVVGDKEKQENKVAVRR 609


>gi|316983701|gb|EFV62682.1| threonyl-tRNA synthetase [Neisseria meningitidis H44/76]
          Length = 648

 Score =  674 bits (1739), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 305/621 (49%), Positives = 436/621 (70%), Gaps = 15/621 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           + +T PDGS++ +    T + +A SI   LAK  VA  +NGK+ D  DP+ E S ++IIT
Sbjct: 13  LNITLPDGSVRQYESPVTVAQIAASIGAGLAKATVAGRVNGKLVDACDPIVEDSAVQIIT 72

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A IE
Sbjct: 73  PKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAIE 132

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M+E+IA+D   +K      +A ++F+ + E YK+ +++ +P  E + +Y   E+ D+C
Sbjct: 133 ARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLIDDMPEVEAMGMYHHQEYVDMC 192

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+EK
Sbjct: 193 RGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKAYIQRIEEAEK 251

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ ++  G++FWH KGW ++Q +  +MR+++    Y+E+ TPQ++D+
Sbjct: 252 RDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDK 311

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             W++SGHWD+Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+RL
Sbjct: 312 TFWEKSGHWDNYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRL 365

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L+I IYK FGF  
Sbjct: 366 AEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLIRIYKQFGFHD 425

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + VKLS RPEKR GSD +WD AE  ++  L          +  G L GEGAFYGPK EY 
Sbjct: 426 VSVKLSLRPEKRAGSDDVWDKAEQGLREALTACG------VEWGELPGEGAFYGPKIEYH 479

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           ++DA+GR WQCGT+Q+DF LP R NA YV  ++++  PVM+HRA+ GS+ERFIGI+IEN 
Sbjct: 480 VRDALGRSWQCGTLQLDFVLPERLNAEYVTENNDRARPVMLHRAILGSLERFIGILIENH 539

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G+ PLWL+P+Q ++  IT +  +Y +E+A  L++     E D RNE I YKIR++S  +
Sbjct: 540 AGSFPLWLAPVQLVIMNITENQADYCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQYR 599

Query: 603 IPIIIICGDKEASERSIGIRR 623
            P  I+ GDKE  E  + +RR
Sbjct: 600 FPYQIVVGDKEKQENKVAVRR 620


>gi|53719558|ref|YP_108544.1| threonyl-tRNA synthetase [Burkholderia pseudomallei K96243]
 gi|53725296|ref|YP_102787.1| threonyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
 gi|76810857|ref|YP_333290.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
 gi|121600801|ref|YP_992866.1| threonyl-tRNA synthetase [Burkholderia mallei SAVP1]
 gi|124385818|ref|YP_001026205.1| threonyl-tRNA synthetase [Burkholderia mallei NCTC 10229]
 gi|126441516|ref|YP_001058752.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 668]
 gi|126449349|ref|YP_001080524.1| threonyl-tRNA synthetase [Burkholderia mallei NCTC 10247]
 gi|126453502|ref|YP_001066005.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|134282197|ref|ZP_01768902.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 305]
 gi|167003090|ref|ZP_02268880.1| threonine--tRNA ligase [Burkholderia mallei PRL-20]
 gi|167719848|ref|ZP_02403084.1| threonyl-tRNA synthetase [Burkholderia pseudomallei DM98]
 gi|167738851|ref|ZP_02411625.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 14]
 gi|167816071|ref|ZP_02447751.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 91]
 gi|167824445|ref|ZP_02455916.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 9]
 gi|167845979|ref|ZP_02471487.1| threonyl-tRNA synthetase [Burkholderia pseudomallei B7210]
 gi|167894556|ref|ZP_02481958.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 7894]
 gi|167902959|ref|ZP_02490164.1| threonyl-tRNA synthetase [Burkholderia pseudomallei NCTC 13177]
 gi|167911196|ref|ZP_02498287.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 112]
 gi|167919220|ref|ZP_02506311.1| threonyl-tRNA synthetase [Burkholderia pseudomallei BCC215]
 gi|217423341|ref|ZP_03454842.1| threonine--tRNA ligase [Burkholderia pseudomallei 576]
 gi|226199711|ref|ZP_03795264.1| threonine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
 gi|237812016|ref|YP_002896467.1| threonine--tRNA ligase [Burkholderia pseudomallei MSHR346]
 gi|238562605|ref|ZP_04610138.1| threonine--tRNA ligase [Burkholderia mallei GB8 horse 4]
 gi|242317788|ref|ZP_04816804.1| threonine--tRNA ligase [Burkholderia pseudomallei 1106b]
 gi|254177492|ref|ZP_04884147.1| threonyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
 gi|254180004|ref|ZP_04886603.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 1655]
 gi|254188582|ref|ZP_04895093.1| threonyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
 gi|254197889|ref|ZP_04904311.1| threonyl-tRNA synthetase [Burkholderia pseudomallei S13]
 gi|254199739|ref|ZP_04906105.1| threonyl-tRNA synthetase [Burkholderia mallei FMH]
 gi|254206061|ref|ZP_04912413.1| threonyl-tRNA synthetase [Burkholderia mallei JHU]
 gi|254259413|ref|ZP_04950467.1| threonine--tRNA ligase [Burkholderia pseudomallei 1710a]
 gi|254297839|ref|ZP_04965292.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 406e]
 gi|254358432|ref|ZP_04974705.1| threonyl-tRNA synthetase [Burkholderia mallei 2002721280]
 gi|73919776|sp|Q62KI2|SYT_BURMA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|73919777|sp|Q63TM2|SYT_BURPS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|123771913|sp|Q3JT13|SYT_BURP1 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|166223324|sp|A3MJT8|SYT_BURM7 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|166223325|sp|A2S2N6|SYT_BURM9 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|166223326|sp|A1V3R3|SYT_BURMS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|166223327|sp|A3NUI4|SYT_BURP0 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|166223328|sp|A3N8T1|SYT_BURP6 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|52209972|emb|CAH35944.1| threonyl-tRNA synthetase [Burkholderia pseudomallei K96243]
 gi|52428719|gb|AAU49312.1| threonyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
 gi|76580310|gb|ABA49785.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
 gi|121229611|gb|ABM52129.1| threonyl-tRNA synthetase [Burkholderia mallei SAVP1]
 gi|124293838|gb|ABN03107.1| threonine--tRNA ligase [Burkholderia mallei NCTC 10229]
 gi|126221009|gb|ABN84515.1| threonine--tRNA ligase [Burkholderia pseudomallei 668]
 gi|126227144|gb|ABN90684.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|126242219|gb|ABO05312.1| threonine--tRNA ligase [Burkholderia mallei NCTC 10247]
 gi|134246235|gb|EBA46324.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 305]
 gi|147749335|gb|EDK56409.1| threonyl-tRNA synthetase [Burkholderia mallei FMH]
 gi|147753504|gb|EDK60569.1| threonyl-tRNA synthetase [Burkholderia mallei JHU]
 gi|148027559|gb|EDK85580.1| threonyl-tRNA synthetase [Burkholderia mallei 2002721280]
 gi|157806992|gb|EDO84162.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 406e]
 gi|157936261|gb|EDO91931.1| threonyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
 gi|160698531|gb|EDP88501.1| threonyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
 gi|169654630|gb|EDS87323.1| threonyl-tRNA synthetase [Burkholderia pseudomallei S13]
 gi|184210544|gb|EDU07587.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 1655]
 gi|217393199|gb|EEC33220.1| threonine--tRNA ligase [Burkholderia pseudomallei 576]
 gi|225928297|gb|EEH24331.1| threonine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
 gi|237505158|gb|ACQ97476.1| threonine--tRNA ligase [Burkholderia pseudomallei MSHR346]
 gi|238522290|gb|EEP85735.1| threonine--tRNA ligase [Burkholderia mallei GB8 horse 4]
 gi|242141027|gb|EES27429.1| threonine--tRNA ligase [Burkholderia pseudomallei 1106b]
 gi|243061341|gb|EES43527.1| threonine--tRNA ligase [Burkholderia mallei PRL-20]
 gi|254218102|gb|EET07486.1| threonine--tRNA ligase [Burkholderia pseudomallei 1710a]
          Length = 635

 Score =  674 bits (1739), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 311/625 (49%), Positives = 434/625 (69%), Gaps = 15/625 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           + +  PDGS++ +    T ++VA SI   LAK A+   ++G++ D S  + R+ S+ I+T
Sbjct: 2   VSIRLPDGSVRQYEHPVTVAEVAASIGPGLAKAALGGKLDGELVDTSALIDRDASLAIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   L +IRHS AH++A AV+ + P+ QV IGP+I++GFYYDF   +PF+ ++L  IE
Sbjct: 62  DKDADGLDIIRHSTAHLLAYAVKELHPDAQVTIGPVIDNGFYYDFSYHRPFTPEDLEAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+MQE+  RD P  ++ +S ++A   F S  E YK EI+ESIPA + + LY  G + DLC
Sbjct: 122 KRMQELAKRDEPVTRRVVSRDEAVSYFRSIGEKYKAEIIESIPASDEIKLYSHGSFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV STG++K  FKLMKVAGAYWRGDS    L RIYGTAW  +++   YL+ LEE+EK
Sbjct: 182 RGPHVPSTGKLK-VFKLMKVAGAYWRGDSKNEQLQRIYGTAWTRKEDQDAYLHMLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQ 302
           RDHRKL +++DLFHI E+  G++FWH KGW ++Q +  YMRR++    Y EI TP ++D+
Sbjct: 241 RDHRKLGKQLDLFHIQEEAPGMVFWHPKGWTLWQQVEQYMRRRLDAAGYLEIKTPMIMDR 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW +YR NMF       T  + R +A+KPMNCPGHV VF HGL+SYR+LP+R 
Sbjct: 301 SLWEASGHWQNYRENMFT------TESEKRDYAIKPMNCPGHVQVFKHGLRSYRDLPLRY 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNE SG+LHGLMRVRGF QDDAH+FCT++Q+ +E +  + L +S+Y+DFGF++
Sbjct: 355 AEFGSCHRNEASGALHGLMRVRGFVQDDAHIFCTEDQINSEAIAFNKLAMSVYEDFGFDR 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I +KLS RPE+R+GSD  WD AE  ++  L       ++      L GEGAFYGPK EY 
Sbjct: 415 IDIKLSLRPEQRMGSDETWDHAEEGLRNALKACGLEWEE------LPGEGAFYGPKIEYH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+GR WQCGT+Q+D  LP R  A YV   + +  PVM+HRA+ GS+ERF+GI+IE+ 
Sbjct: 469 IKDALGRSWQCGTLQLDMMLPERLGAEYVAEDNSRRRPVMLHRAIVGSMERFLGILIEHH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G +P+WL+P  A+V  I  S  EYA+ +A  L+   L +  D RNE I+YKIREH+++K
Sbjct: 529 AGAMPVWLAPAHAVVLNIAESQAEYARTVAQSLQKQGLRVSADLRNEKISYKIREHTLEK 588

Query: 603 IPIIIICGDKEASERSIGIRRFGST 627
           +P +++ GDKE   +++ +R  G  
Sbjct: 589 VPYLLVVGDKEREAQTVAVRARGGV 613


>gi|91776355|ref|YP_546111.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Methylobacillus
           flagellatus KT]
 gi|123254150|sp|Q1GZR7|SYT_METFK RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|91710342|gb|ABE50270.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Methylobacillus
           flagellatus KT]
          Length = 635

 Score =  674 bits (1738), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 310/636 (48%), Positives = 442/636 (69%), Gaps = 21/636 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPE 65
           +  PDGS + F    T ++VA +I   LA+ A+   +NGK  D S  + +   + IIT  
Sbjct: 4   IRLPDGSERKFDGPVTVAEVAMNIGAGLARAALGGKVNGKAVDTSYLITDDADLSIITDR 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   LA+IRHS AH++A+AV+ ++P+ QV IGP+IE+GFYYDF  ++PF+ ++L +IE +
Sbjct: 64  DAEGLAIIRHSTAHLLAQAVKQLFPDAQVTIGPVIENGFYYDFSYKRPFTPEDLQKIEAR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           MQE+  RD P ++  +  ++A   F+S  E YK EI+ SIPA + ++LY Q ++ DLCRG
Sbjct: 124 MQELAKRDIPIVRTVMERDEAVAYFQSIGEQYKAEIIGSIPADQEISLYTQDDFTDLCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
            HV STG++K F KLMKVAGAYWRGDSN  ML RIYGTAW  +++L  YL+ LEE+EKRD
Sbjct: 184 THVPSTGKLKAF-KLMKVAGAYWRGDSNNEMLQRIYGTAWAKKEDLDAYLHMLEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHL 304
           HRKL R++D FH+ ++  G++FWH +GW I+Q +  YMR   ++  Y+E+ TP ++D+ +
Sbjct: 243 HRKLGRQLDFFHMQDEAPGMVFWHPRGWVIWQEVEQYMRNMFREFGYQEVRTPTIMDRVM 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHW +Y  NMF       T  + R +A+KPMNCPGH+ +FN  L SYR+LP+RLAE
Sbjct: 303 WEKSGHWQNYHDNMFT------TASENRDYAVKPMNCPGHIQIFNSTLHSYRDLPLRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT++Q+ +E      ++   YKDFGF +++
Sbjct: 357 FGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEDQVKDEVADFIVMLYKAYKDFGFNEVL 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           VKLSTRPEKRVG+D  WD AE  +   L       Q+ ++  +  GEGAFYGPK E+ LK
Sbjct: 417 VKLSTRPEKRVGTDEAWDKAEEALAVAL------RQNNLDFELQPGEGAFYGPKIEFTLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D++GR WQCGTIQ+DFNLP R  A YV+  + + HPVM+HRA+ GS+ERF+GI+IEN+ G
Sbjct: 471 DSLGRLWQCGTIQLDFNLPERLGAEYVDEDNSRKHPVMLHRAIVGSMERFLGILIENYAG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
            +P WL+P+QA+V  I+    +Y   +   L+ +   +++D RNE I YKIREHS++K+P
Sbjct: 531 AMPAWLAPVQAMVLNISDGQADYVSSVVAELRKNGFRVDSDLRNEKITYKIREHSLQKLP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
            ++I G++E     + +R      T+K   L ++P+
Sbjct: 591 YLLIAGEREMQTGQVAVR------TRKGEDLGSMPL 620


>gi|161869662|ref|YP_001598829.1| threonyl-tRNA synthetase [Neisseria meningitidis 053442]
 gi|189083614|sp|A9M375|SYT_NEIM0 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|161595215|gb|ABX72875.1| threonyl-tRNA synthetase [Neisseria meningitidis 053442]
          Length = 637

 Score =  674 bits (1738), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 304/621 (48%), Positives = 436/621 (70%), Gaps = 15/621 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           + +T PDGS++ +    T + +A SI   LAK AVA  +NGK+ D  DP+ E  S++IIT
Sbjct: 2   LNITLPDGSVRQYESPVTVAQIAASIGAGLAKAAVAGKVNGKLVDACDPITEDSSVQIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A IE
Sbjct: 62  PKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M+E+IA+D   +K      +A ++F+ + E YK+ +++ +P  E + +Y   E+ D+C
Sbjct: 122 ARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLIDDMPEVEAMGMYHHQEYVDMC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+EK
Sbjct: 182 RGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKAYIQRIEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ ++  G++FWH KGW ++Q +  +MR+++    Y+E+ TPQ++D+
Sbjct: 241 RDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDK 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             W++SGHWD+Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+RL
Sbjct: 301 TFWEKSGHWDNYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRL 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF  
Sbjct: 355 AEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFHD 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + VKLS RPEKR GSD +WD AE  ++  L          +  G L GEGAFYGPK EY 
Sbjct: 415 VSVKLSLRPEKRAGSDDVWDKAEQGLREALTACG------VEWGELPGEGAFYGPKIEYH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           ++DA+GR WQCGT+Q+DF LP R  A YV  ++++  PVM+HRA+ GS+ERFIGI+IEN 
Sbjct: 469 VRDALGRSWQCGTLQLDFVLPERLGAEYVTENNDRARPVMLHRAILGSLERFIGILIENH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G+ PLWL+P+Q ++  IT +  +Y +E+A  L++     E D RNE I YKIR++S  +
Sbjct: 529 AGSFPLWLAPVQLVIMNITENQADYCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQYR 588

Query: 603 IPIIIICGDKEASERSIGIRR 623
            P  I+ GDKE  E  + +RR
Sbjct: 589 FPYQIVVGDKEKQENKVAVRR 609


>gi|294340009|emb|CAZ88373.1| threonine tRNA synthetase [Thiomonas sp. 3As]
          Length = 639

 Score =  674 bits (1738), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 310/642 (48%), Positives = 442/642 (68%), Gaps = 15/642 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
            ++T PDGS + F      +++A+SI   L K A+A  ++GK+ D S  + ++  + I+T
Sbjct: 2   FQITLPDGSKRAFEAPLMVAELAQSIGAGLFKAALAGKVDGKLVDTSYRLSQDAEVAIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   + VIRHS AH++A AV+ ++P+ QV IGP+IE+GFYYDF  ++PF+ ++L +IE
Sbjct: 62  DKDAEGVEVIRHSTAHLLAYAVKDLYPDAQVTIGPVIENGFYYDFAYKRPFTPEDLEKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M E+  +D P  ++ L  ++A + F+S  E YK EI+ SIPA E+V+LY +G + DLC
Sbjct: 122 ARMAELARKDEPVRRKVLPRDEAVDYFKSLGEHYKAEIIASIPAGEDVSLYSEGAFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV STG++K  FKLMKVAGAYWRGD     L RIYGTAW  +++   YL+ L E+EK
Sbjct: 182 RGPHVPSTGRLK-VFKLMKVAGAYWRGDHRNAQLQRIYGTAWAKKEDQDAYLHALAEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQ 302
           RDHRKL +E+DLFH  E+  G+ FWH KGW ++Q +  YMR+  +D  Y+E+  PQ+LD 
Sbjct: 241 RDHRKLGKELDLFHFQEEAPGLAFWHPKGWALWQAVEQYMRQVYRDSGYQEVKGPQILDV 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD+Y  NMF       T  + R FA+KPMNCPGH+ +FN GL+SYR+LP+R 
Sbjct: 301 SLWKRSGHWDNYSENMFF------TESEKRQFAVKPMNCPGHIQIFNSGLRSYRDLPIRY 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFGS +RNEPSG+LHGL+RVRGFTQDD H+FCT++Q+  E    H   + +Y DFGF  
Sbjct: 355 GEFGSCHRNEPSGALHGLLRVRGFTQDDGHIFCTEDQIEAEVTAFHQQAMQVYTDFGFTD 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I +K++ RPEKR+G +A+WD AE  ++  L     + Q+      L GEGAFYGPK EY 
Sbjct: 415 IALKIALRPEKRIGEEAVWDKAEAALRAALQACGVAWQE------LPGEGAFYGPKIEYH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KD+IGR WQ GT+QVDF +P R +A YV+ HS++  PVM+HRA+ GS+ERFIG++IE++
Sbjct: 469 MKDSIGRAWQVGTMQVDFMMPERLDAEYVDEHSQRVRPVMLHRAIVGSMERFIGVLIEHY 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G +PLWL+P+QA+V  IT +  +YA+ +A  L      +E D RNE INYKIRE+++ K
Sbjct: 529 AGAMPLWLAPVQAVVMNITDAQADYARSVAQALTKQGFRVELDLRNEKINYKIRENALSK 588

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P +++ GD+E    +I +R  G+     +SL      L++E
Sbjct: 589 VPYLLVVGDQERDAGTIAVRARGNVNLGVLSLEALTQKLSQE 630


>gi|237745470|ref|ZP_04575950.1| threonyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
 gi|229376821|gb|EEO26912.1| threonyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
          Length = 650

 Score =  674 bits (1738), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 315/642 (49%), Positives = 439/642 (68%), Gaps = 15/642 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I +  PDGS + F    T S VA SI   LAK A+A  ++ ++ D S  +  +  + I+T
Sbjct: 17  ISVRLPDGSKREFGEPVTVSQVAASIGSGLAKAALAGKVDDRLVDTSYLIDHDVDLSIVT 76

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
             D   + ++RHS AH++A AV+ ++PE QV IGP+IE+GFYYDF  ++PF+ ++L  IE
Sbjct: 77  DRDVEGVDILRHSTAHLLAYAVKQLFPEAQVTIGPVIENGFYYDFSYKRPFTPEDLQAIE 136

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           KKM E+  ++    ++ L  ++A   F+S  E YK EI+ESIP  E+V+LY  G + DLC
Sbjct: 137 KKMTELARKNETVTRKVLPRDEAVAYFKSIGEDYKAEIIESIPQNEDVSLYTSGGFTDLC 196

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV + G++K  FKLM+VAGAYWRGDS   ML RIYGTAW  +++   YL+ LEE+EK
Sbjct: 197 RGPHVPANGKLK-VFKLMRVAGAYWRGDSKNEMLQRIYGTAWAKKEDQDAYLHMLEEAEK 255

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQ 302
           RDHR+L R +DLFH  ++  G+IFWH KGW I+Q +  YMR+  +D+ Y+E+  PQ+LD+
Sbjct: 256 RDHRRLGRSLDLFHFQDEAPGLIFWHPKGWTIWQQVEQYMRKVYRDNGYQEVKGPQILDR 315

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD+Y+ NMF  +  +      R +A+KPMNCPGHV ++   L SYRELP+R 
Sbjct: 316 SLWEKSGHWDNYKENMFTTESEN------RVYAIKPMNCPGHVQIYRSNLHSYRELPLRY 369

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG  +RNEPSGSLHG+MRVRGFTQDD H+FCT++Q+ +EC+   +L+  +YKDFGF  
Sbjct: 370 GEFGQCHRNEPSGSLHGMMRVRGFTQDDGHIFCTEDQILDECVAFTDLLKKVYKDFGFTD 429

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+ K++TRPEKRVGSD  WD AEN    +++++K S        +  G+GAFYGPK EY 
Sbjct: 430 IIYKVATRPEKRVGSDEAWDKAEN---ALIESLKRSG---CEFELSPGDGAFYGPKIEYT 483

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+DAIGR WQCGTIQVDF++P R  A YV   + +  PVMIHRA+ GS+ERFIGI+IEN 
Sbjct: 484 LRDAIGRMWQCGTIQVDFSMPMRLGAEYVAEDNTRKIPVMIHRAILGSLERFIGILIENH 543

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G +PLWL+P+QA+V  I+ +  EYA+ +   +K   L +E D RNE I YKIR+HS+ K
Sbjct: 544 AGAMPLWLAPVQAVVLNISDAQAEYAKSVVETMKKAGLRVEADLRNEKITYKIRDHSVNK 603

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P +++ GDKE +  ++ +R  G      +S  + I  +  E
Sbjct: 604 VPYLLVVGDKEKNGNTVAVRARGGVDLGAMSADELIARMENE 645


>gi|241758603|ref|ZP_04756718.1| threonine--tRNA ligase [Neisseria flavescens SK114]
 gi|241321255|gb|EER57427.1| threonine--tRNA ligase [Neisseria flavescens SK114]
          Length = 637

 Score =  674 bits (1738), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 301/621 (48%), Positives = 437/621 (70%), Gaps = 15/621 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           + +T PDGS++ +    T + +A SI   LAK  VA  +NGK+ D  DP+ E + ++IIT
Sbjct: 2   LNITLPDGSVRQYESPVTVAQIAASIGAGLAKATVAGKVNGKLVDACDPITEDAHVQIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+D   + +IRHSCAH++  AV+ ++P+ ++ IGP+IEDGFYYD   E+PF+ D++A IE
Sbjct: 62  PKDKEGVEIIRHSCAHLVGHAVKQLYPDAKMVIGPVIEDGFYYDIATEKPFTPDDVAAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M+E+IA+D   +K      +  ++F+ + E YK+ ++E +P  E + +Y   E+ D+C
Sbjct: 122 ARMKELIAQDYDVIKVMTPRAETVKIFQDRGEEYKLRLIEDMPEVEAMGMYHHQEYVDMC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +T  +K F KL K+AGAYWRGDSN  ML R+YGTAW ++ EL  Y+  +EE+EK
Sbjct: 182 RGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRVYGTAWASKDELKAYIQRIEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ ++  G++FWH KGW ++Q +  +MR+++    Y+E+ TPQ++D+
Sbjct: 241 RDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQVIEQHMRKELNVAGYKEVKTPQIMDK 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             W++SGHW++Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+RL
Sbjct: 301 TFWEKSGHWENYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRL 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF  
Sbjct: 355 AEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVDEARAFNELLVRIYKQFGFHD 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + VKLS RPE+R GSD +WD AE  ++  L       ++      L GEGAFYGPK EY 
Sbjct: 415 VAVKLSLRPEQRAGSDEVWDKAEQGLRDALTACGVEWEE------LPGEGAFYGPKIEYH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+GR WQCGT+Q+DF LP R NA YV  ++++  PVM+HRA+ GS+ERFIGI+IEN 
Sbjct: 469 VKDALGRSWQCGTLQLDFVLPERLNAEYVTENNDRARPVMLHRAILGSLERFIGILIENH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G+ PLWL+P+Q ++  IT +  +Y +E+A  L++    +E D RNE I YKIR++S  +
Sbjct: 529 AGSFPLWLAPVQMVIMNITENQADYCREVAVKLQAAGFRVELDLRNEKIGYKIRDNSQYR 588

Query: 603 IPIIIICGDKEASERSIGIRR 623
            P  I+ GDKE  E  + +RR
Sbjct: 589 FPYQIVVGDKEKQENKVAVRR 609


>gi|240016048|ref|ZP_04722588.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae FA6140]
          Length = 648

 Score =  673 bits (1737), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 303/621 (48%), Positives = 438/621 (70%), Gaps = 15/621 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           + +T PD S++ +    T + +A SI   LAK AVA  +NGK+ D  DP+ E S ++IIT
Sbjct: 13  LNITLPDCSVRQYESPVTVAQIAASIGAGLAKAAVAGKVNGKLVDACDPIVEDSAVQIIT 72

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A IE
Sbjct: 73  PKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAIE 132

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M+E+IA+D   +K      +A ++F+ + E YK+ +++ +P  E + +Y   E+ D+C
Sbjct: 133 ARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLIDDMPEVEAMGMYHHQEYVDMC 192

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+EK
Sbjct: 193 RGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKDYIQRIEEAEK 251

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ ++  G++FWH KGW ++QT+  +MR+++    Y+E+ TPQ++D+
Sbjct: 252 RDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQTIEQHMRKELNAAGYKEVKTPQIMDK 311

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             W++SGHWD+Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+RL
Sbjct: 312 TFWEKSGHWDNYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRL 365

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF  
Sbjct: 366 AEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFHD 425

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + V+LS RPEKR GSD +WD AE  ++  L          +  G L GEGAFYGPK EY 
Sbjct: 426 VSVRLSLRPEKRAGSDDVWDKAEQGLREALTACG------VEWGELPGEGAFYGPKIEYH 479

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+GR WQCGT+Q+DF LP R +A YV  ++++  PVM+HRA+ GS+ERF+GI+IEN+
Sbjct: 480 VKDALGRSWQCGTLQLDFVLPERLDAEYVTENNDRARPVMLHRAILGSLERFVGILIENY 539

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G+ PLWL+P+Q ++  IT +  +Y +E+A  L++     E D RNE I YKIR++S  +
Sbjct: 540 AGSFPLWLAPVQMVIMNITENQADYCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQYR 599

Query: 603 IPIIIICGDKEASERSIGIRR 623
            P  I+ GDKE  E  + +RR
Sbjct: 600 FPYQIVIGDKEKQENKVAVRR 620


>gi|301629969|ref|XP_002944104.1| PREDICTED: threonyl-tRNA synthetase-like [Xenopus (Silurana)
           tropicalis]
          Length = 841

 Score =  673 bits (1737), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 319/615 (51%), Positives = 435/615 (70%), Gaps = 19/615 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           +++T PDGS + +P   T +DVA SI   LAK A+A  I+GKV D S  + + S + IIT
Sbjct: 2   LQITLPDGSRRAYPGPVTVADVAASIGAGLAKAALAGKIDGKVVDTSYQITQDSPLSIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +DP  L +IRHS AH++A AV+ ++P+ QV IGP+IE+GFYYDF  ++PF+ ++L  IE
Sbjct: 62  AKDPEGLELIRHSTAHLLAYAVKELFPQAQVTIGPVIENGFYYDFSYQRPFTPEDLVAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M E+ A+D P +++ L  ++A   F+   E YK EI+ SIP  E+V+LYR+G + DLC
Sbjct: 122 KRMTELAAKDEPVVRRVLPRDEAVTYFKGLGEHYKAEIIASIPRNEDVSLYREGGFEDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV STG+++ F KLMKVAGAYWRGD    ML R+YGTAW ++ EL QYL+ LEE+EK
Sbjct: 182 RGPHVPSTGKLRHF-KLMKVAGAYWRGDHRNEMLQRVYGTAWTSKDELQQYLHMLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQ 302
           RDHRKL RE+DLFHI E   G +FWH KGW ++Q +  YMRR  +D+ Y+E+  PQ+LD+
Sbjct: 241 RDHRKLGRELDLFHIDEHAPGTVFWHPKGWMLWQEVEQYMRRVYRDNGYQEVKGPQILDK 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+++GHWD YR NMF       T  + R +ALKPMNCPGH+ +F  G+KSYR+LP+R 
Sbjct: 301 TLWEKTGHWDKYRENMFI------TESEKRDYALKPMNCPGHILIFKQGIKSYRDLPLRF 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG+ +RNEP+G LHG+MRVRGFTQDD H+FCT++ + +E      L+  +Y+DFGF +
Sbjct: 355 GEFGNCHRNEPTGGLHGIMRVRGFTQDDGHIFCTEDMIQSEVATFTTLLQRVYRDFGFTE 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+ +LSTRPEKR+GS+  WD AE+ +   L     + +       L GEGAFYGPK EY+
Sbjct: 415 ILYRLSTRPEKRIGSEESWDRAESALAEGLRASGCTFE------YLPGEGAFYGPKIEYV 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LKDA+GR+WQCGTIQVD N+P R +A +V     +  P+++HRA+ GS+ERFIGI+IE F
Sbjct: 469 LKDALGREWQCGTIQVDPNMPERLDAEFVGEDGARHRPIVLHRAIVGSLERFIGILIEQF 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIA----NLLKSHHLSIETDFRNETINYKIREH 598
            G LP+WL+P+Q  V  IT +  +Y +EIA      L +  L   TD RNE I YKIREH
Sbjct: 529 AGALPVWLAPVQVAVLNITDAQADYCREIAAKLHKALPNQSLRAVTDLRNEKITYKIREH 588

Query: 599 SIKKIPIIIICGDKE 613
           +++K+P I++ GDKE
Sbjct: 589 ALQKLPYILVVGDKE 603


>gi|296135845|ref|YP_003643087.1| threonyl-tRNA synthetase [Thiomonas intermedia K12]
 gi|295795967|gb|ADG30757.1| threonyl-tRNA synthetase [Thiomonas intermedia K12]
          Length = 639

 Score =  673 bits (1737), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 310/642 (48%), Positives = 442/642 (68%), Gaps = 15/642 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
            ++T PDGS + F    T +++A+SI   L K A+A  ++GK+ D S  + ++  + I+T
Sbjct: 2   FQITLPDGSKRAFEAPLTVAELAQSIGAGLFKAALAGKVDGKLVDTSYRLSQDAEVAIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   + VIRHS AH++A AV+ ++P+ QV IGP+IE+GFYYDF  ++PF+ ++L +IE
Sbjct: 62  DKDAEGVEVIRHSTAHLLAYAVKDLYPDAQVTIGPVIENGFYYDFAYKRPFTPEDLEKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M E+  +D P  ++ L  ++A + F+S  E YK EI+ SIPA E+V+LY +G + DLC
Sbjct: 122 VRMAELARKDEPVRRKVLPRDEAVDYFKSLGEHYKAEIIASIPAGEDVSLYSEGAFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV STG++K  FKLMKVAGAYWRGD     L RIYGTAW  +++   YL+ L E+EK
Sbjct: 182 RGPHVPSTGRLK-VFKLMKVAGAYWRGDHRNAQLQRIYGTAWAKKEDQDAYLHALAEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQ 302
           RDHRKL +E+DLFH  E+  G+ FWH KGW ++Q +  YMR+  +D  Y+E+  PQ+LD 
Sbjct: 241 RDHRKLGKELDLFHFQEEAPGLAFWHPKGWALWQAVEQYMRQVYRDSGYQEVKGPQILDV 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD+Y  NMF       T  + R FA+KPMNCPGH+ +FN GL+SYR+LP+R 
Sbjct: 301 SLWKRSGHWDNYSENMFF------TESEKRQFAVKPMNCPGHIQIFNSGLRSYRDLPIRY 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFGS +RNEPSG+LHGL+RVRGFTQDD H+FCT++Q+  E    H   + +Y DFGF  
Sbjct: 355 GEFGSCHRNEPSGALHGLLRVRGFTQDDGHIFCTEDQIEAEVTAFHQQAMQVYTDFGFTD 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I +K++ RPEKR+G +A+WD AE  ++  L     + Q+      L GEGAFYGPK EY 
Sbjct: 415 IALKIALRPEKRIGEEAVWDKAEAALRAALQACGVAWQE------LPGEGAFYGPKIEYH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KD+IGR WQ GT+QVDF +P R +A YV+ HS++  PVM+HRA+ GS+ERFIG++IE++
Sbjct: 469 MKDSIGRAWQVGTMQVDFMMPERLDAEYVDEHSQRVRPVMLHRAIVGSMERFIGVLIEHY 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G +PLWL+P+Q +V  IT +  +YA+ +A  L      +E D RNE INYKIRE+++ K
Sbjct: 529 AGAMPLWLAPVQTVVMNITDAQADYARSVAQALTKQGFRVELDLRNEKINYKIRENALSK 588

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P +++ GD+E    +I +R  G+     +SL      L++E
Sbjct: 589 VPYLLVVGDQERDAGTIAVRARGNVNLGVLSLEALTQKLSQE 630


>gi|299066586|emb|CBJ37776.1| threonine tRNA synthetase [Ralstonia solanacearum CMR15]
          Length = 635

 Score =  673 bits (1737), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 322/640 (50%), Positives = 441/640 (68%), Gaps = 21/640 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           I +T PDGS + FP   T ++VA+SI   LAK A+A  I+G++ D S  + +   + I+T
Sbjct: 2   IAITLPDGSRREFPGPVTVAEVAQSIGAGLAKAALAGRIDGQLVDTSFRIEQSVDLAIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   L VIRHS AH++A AV+ ++PE QV IGP+IE+GFYYDF  ++PF+ ++L  IE
Sbjct: 62  DKDVDGLDVIRHSTAHLLAYAVKELYPEAQVTIGPVIENGFYYDFAYKRPFTPEDLVAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M E+  +D    ++  S + A +LFE   E YK EI+ SIP  + + LYR+G + DLC
Sbjct: 122 KRMAELAKKDEKVTREVWSRDDAVKLFEGMGEKYKAEIIASIPQDQEIGLYREGNFVDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV STG++K  FKLMKVAGAYWRGDSN  ML RIYGTAW  +++   YL+ LEE+EK
Sbjct: 182 RGPHVPSTGKLK-VFKLMKVAGAYWRGDSNNEMLQRIYGTAWAKKEDQEAYLHMLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL + +DLFH+ E+  G++FWH KGW+I+Q +  YMR ++    Y E+ TPQV+D+
Sbjct: 241 RDHRKLGKVLDLFHLQEEAPGMVFWHPKGWQIWQAVEQYMRGRLAGAGYSEVRTPQVMDR 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHW++Y+ NMF       T  + R +A+KPMNCPGHV +FNHGL+SYR+LP+RL
Sbjct: 301 GLWERSGHWENYKENMFV------TESEKREYAIKPMNCPGHVQIFNHGLRSYRDLPLRL 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFG+ +RNEPSG+LHGLMRVRGF QDDAH+FCT+ Q+  E    ++L  S+Y+DFGFE 
Sbjct: 355 AEFGACHRNEPSGALHGLMRVRGFVQDDAHIFCTEGQIMAEAKDFNDLAFSVYEDFGFEN 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + VKL+ RP+KR GSD +WD AE+ ++  L       ++      L GEGAFYGPK EY 
Sbjct: 415 VAVKLALRPDKRAGSDDIWDHAEDGLRTALRACGVEWEE------LPGEGAFYGPKVEYH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDAIGR WQCGT+Q+D  LP R  A YV   + +  PVM+HRA+ GS ERF+GI++EN 
Sbjct: 469 IKDAIGRSWQCGTLQLDLVLPERLGAEYVAEDNSRKRPVMLHRAILGSFERFLGILLENH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G LPLWL+P Q +V +I  +  EYA+ +A  L+        D RNE I YKIREHS++K
Sbjct: 529 AGALPLWLAPEQVVVMSIADAHAEYAESVAQSLQKQGFRAFADLRNEKITYKIREHSLQK 588

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +P +++ GDKE     + +R  G+        L ++P+ T
Sbjct: 589 VPYLVVVGDKERDGNQVAVRARGNVD------LGSMPVST 622


>gi|84501632|ref|ZP_00999804.1| Threonyl-tRNA synthetase, class IIa [Oceanicola batsensis HTCC2597]
 gi|84390253|gb|EAQ02812.1| Threonyl-tRNA synthetase, class IIa [Oceanicola batsensis HTCC2597]
          Length = 659

 Score =  673 bits (1737), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/662 (49%), Positives = 441/662 (66%), Gaps = 21/662 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
           S I LTFPDG+ +  P   T + VA  IS SL KKA++  +NG   DL  P+ ++ S+ I
Sbjct: 2   SQITLTFPDGNTREVPQGITPAQVASDISTSLGKKAISATVNGAHFDLQWPIEKDASVAI 61

Query: 62  IT-PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            T  +D ++L +IRH  AHIMA AVQ IWPEV+V IGP+ + G++YDFD+E+PF+ ++L 
Sbjct: 62  HTMQDDEQALELIRHDLAHIMARAVQEIWPEVKVTIGPVRDYGWFYDFDREEPFTPEDLG 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IE +M+EII        +  S ++A   +E   E YKVE++  IP  E + +Y  G+W 
Sbjct: 122 RIEARMKEIINARDAVRTEVWSRDQAIAHYEKTGEPYKVELVNRIPEGEPIRMYWHGDWQ 181

Query: 181 DLCRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           DLCRGPH++ TGQV    FKL  +AGAYW GDS+RPML RIYG A+  + +L  +L  LE
Sbjct: 182 DLCRGPHLQHTGQVPADAFKLTHIAGAYWLGDSSRPMLQRIYGIAFKNRNDLKAHLNMLE 241

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+ KRDHRKL REM LFH+ E+  G +FWH  GW I+ TL  Y+RRK +   Y EINTPQ
Sbjct: 242 EAAKRDHRKLGREMGLFHMQEEAPGQVFWHPNGWTIYTTLQDYVRRKQRAGGYNEINTPQ 301

Query: 299 VLDQHLWQQSGHWDSYRANMFAVK-----------CADDTIKDLRTFALKPMNCPGHVAV 347
           V+D+ LW+ SGHW+ Y+ +MF V+            A  + +  R  ALKPMNCP HV V
Sbjct: 302 VVDRKLWEASGHWEKYQHHMFIVEVDESRDGEHDDAAAKSREHTRINALKPMNCPCHVQV 361

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
           FN GLKSYR+LP+RLAEFGS  R EPSG+LHG+MRVRGFTQDDAH+FCT+EQ+  EC + 
Sbjct: 362 FNQGLKSYRDLPLRLAEFGSCARFEPSGALHGIMRVRGFTQDDAHIFCTEEQIQEECARF 421

Query: 408 HNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGV 467
            + +  IY++ GF +  ++ +TRPEKRVG++  WD  E  ++   + IK +  D +   +
Sbjct: 422 IDFLADIYRELGFPEFEIRFATRPEKRVGTEESWDYVEGALE---NAIKATGHDYV---L 475

Query: 468 LLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAV 527
             G+GAFYGPK ++ L DAIGR WQCGT QVD NLP R +A Y+ +  E+  P M+HRAV
Sbjct: 476 EPGDGAFYGPKLDFYLTDAIGRVWQCGTFQVDPNLPERLDAGYIAADGERHRPFMLHRAV 535

Query: 528 FGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR 587
            GS ERFIGI+IEN  G LPLWL+P Q +V  I S A +Y +E+   L++  +  ETD R
Sbjct: 536 LGSFERFIGILIENHAGKLPLWLAPRQVVVAAIVSDADDYCREVVAKLQAAGIRAETDLR 595

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLP 647
           NE INYK+REHS+ K+P I+ CG KE  ER++ +R+ G   T   +L + +  L  E+ P
Sbjct: 596 NEKINYKVREHSVGKVPYILACGMKEVEERTVSVRKLGEKQTSGATLDEIVDRLRTEATP 655

Query: 648 PD 649
           PD
Sbjct: 656 PD 657


>gi|83719712|ref|YP_443111.1| threonyl-tRNA synthetase [Burkholderia thailandensis E264]
 gi|167620276|ref|ZP_02388907.1| threonyl-tRNA synthetase [Burkholderia thailandensis Bt4]
 gi|123767616|sp|Q2SVD8|SYT_BURTA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|83653537|gb|ABC37600.1| threonyl-tRNA synthetase [Burkholderia thailandensis E264]
          Length = 635

 Score =  673 bits (1737), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 312/625 (49%), Positives = 432/625 (69%), Gaps = 15/625 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           + +  PDGSI+ +    T ++VA SI   LAK A+   ++G++ D S  + R+ S+ I+T
Sbjct: 2   VSIRLPDGSIRQYEHPVTVAEVAASIGPGLAKAALGGKLDGELVDTSALIDRDASLAIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   L +IRHS AH++A AV+ + P+ QV IGP+I++GFYYDF   +PF+ ++L  IE
Sbjct: 62  DKDADGLDIIRHSTAHLLAYAVKELHPDAQVTIGPVIDNGFYYDFSYHRPFTPEDLEAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+MQE+  RD P  ++ +S ++A   F S  E YK EI+ESIPA + + LY  G + DLC
Sbjct: 122 KRMQELAKRDEPVTRRVVSRDEAVSYFRSIGEKYKAEIIESIPASDEIKLYSHGGFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV STG++K  FKLMKVAGAYWRGDS    L RIYGTAW  +++   YL+ LEE+EK
Sbjct: 182 RGPHVPSTGKLK-VFKLMKVAGAYWRGDSKNEQLQRIYGTAWTKKEDQDAYLHMLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQ 302
           RDHRKL +++DLFHI E+  G++FWH KGW ++Q +  YMRR++    Y EI TP ++D+
Sbjct: 241 RDHRKLGKQLDLFHIQEEAPGMVFWHPKGWTLWQRVEQYMRRRLDAAGYLEIKTPMIMDR 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW +YR NMF       T  + R +A+KPMNCPGHV VF HGL+SYR+LP+R 
Sbjct: 301 SLWEASGHWQNYRENMFT------TESEKRDYAIKPMNCPGHVQVFKHGLRSYRDLPLRY 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNE SG+LHGLMRVRGF QDDAH+FCT++Q+ +E +  + L +S+Y+DFGF++
Sbjct: 355 AEFGSCHRNEASGALHGLMRVRGFVQDDAHIFCTEDQINSEAIAFNKLAMSVYEDFGFDR 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I +KLS RPE+R+GSD  WD AE  ++  L       ++      L GEGAFYGPK EY 
Sbjct: 415 IDIKLSLRPEQRMGSDETWDHAEEGLRNALKACGLEWEE------LPGEGAFYGPKIEYH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+GR WQCGT+Q+D  LP R  A YV   + +  PVM+HRA+ GS+ERF+GI+IE+ 
Sbjct: 469 IKDALGRSWQCGTLQLDMMLPERLGAEYVAEDNSRRRPVMLHRAIVGSMERFLGILIEHH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G +P WL+P  A+V  I  S  EYAQ +   L+   L +  D RNE I+YKIREH+++K
Sbjct: 529 AGAMPAWLAPFHAVVLNIAESQAEYAQTVVQSLQKQGLRVSADLRNEKISYKIREHTLEK 588

Query: 603 IPIIIICGDKEASERSIGIRRFGST 627
           +P +++ GDKE   +++ +R  G  
Sbjct: 589 VPYLLVVGDKEREAQTVAVRARGGV 613


>gi|325127774|gb|EGC50682.1| threonyl-tRNA synthetase [Neisseria meningitidis N1568]
          Length = 637

 Score =  673 bits (1736), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 305/621 (49%), Positives = 436/621 (70%), Gaps = 15/621 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           + +T PDGS++ +    T + +A SI   LAK AVA  +NGK+ D  DP+ E S ++IIT
Sbjct: 2   LNITLPDGSVRQYESPVTVAQIAASIGAGLAKAAVAGRVNGKLVDACDPIVEDSAVQIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A IE
Sbjct: 62  PKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M+E+IA+D   +K      +A ++F+ + E YK+ +++ +   E + +Y   E+ D+C
Sbjct: 122 ARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLIDDMSEVEAMGMYHHQEYVDMC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+EK
Sbjct: 182 RGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKAYIQRIEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ ++  G++FWH KGW ++Q +  +MR+++    Y+E+ TPQ++D+
Sbjct: 241 RDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDK 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             W++SGHWD+Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+RL
Sbjct: 301 TFWEKSGHWDNYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRL 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF  
Sbjct: 355 AEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFHD 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + VKLS RPEKR GSD +WD AE  ++  L          +  G L GEGAFYGPK EY 
Sbjct: 415 VSVKLSLRPEKRAGSDDVWDKAEQGLREALTACG------VEWGELPGEGAFYGPKIEYH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+GR WQCGT+Q+DF LP R NA YV  ++++  PVM+HRA+ GS+ERFIGI+IEN 
Sbjct: 469 VKDALGRSWQCGTLQLDFVLPERLNAEYVTENNDRARPVMLHRAILGSLERFIGILIENH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G+ PLWL+P+Q ++  IT +  +Y +E+A  L++     E D RNE I YKIR++S  +
Sbjct: 529 AGSFPLWLAPVQLVIMNITENQADYCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQYR 588

Query: 603 IPIIIICGDKEASERSIGIRR 623
            P  I+ GDKE  E  + +RR
Sbjct: 589 FPYQIVVGDKEKQENKVAVRR 609


>gi|85705178|ref|ZP_01036278.1| threonyl-tRNA synthetase [Roseovarius sp. 217]
 gi|85670500|gb|EAQ25361.1| threonyl-tRNA synthetase [Roseovarius sp. 217]
          Length = 648

 Score =  673 bits (1736), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 321/651 (49%), Positives = 436/651 (66%), Gaps = 10/651 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
           + I LTFPDG+ +++    T ++VA SIS SLAK+ ++  ++    DL  P+ R+ ++ +
Sbjct: 2   AQISLTFPDGNTRSYDKGVTPAEVAASISPSLAKRTISAYVDDAHWDLQWPIDRDAALTL 61

Query: 62  ITPEDPR-SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            T +D   +L +IRH  AHIMA AVQ IWP+V+V IGP+I +G+YYDFD+  PF+ ++L 
Sbjct: 62  NTMKDEAPALELIRHDLAHIMARAVQEIWPDVKVTIGPVISNGWYYDFDRAAPFTPEDLG 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEKKM++II    P   +    ++A + +    E YK+E++E+IP  E + +Y  G+W 
Sbjct: 122 LIEKKMKDIINLRDPVRTEIWDRDRAIQHYRDTGEPYKIELIEAIPGDEPLRMYWHGDWQ 181

Query: 181 DLCRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           DLCRGPH+++TGQV    FKLM VAGAYWRGDS RPML RIYG A+  +  L  YL FLE
Sbjct: 182 DLCRGPHLQNTGQVPADAFKLMSVAGAYWRGDSTRPMLQRIYGVAFQNRDALKDYLTFLE 241

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+E+RDHRKL REMDLFH+ E+  G +FWH  GW ++ TL  YMRR+ +   Y E+NTPQ
Sbjct: 242 EAERRDHRKLGREMDLFHMQEEAPGQVFWHPNGWTVYTTLQDYMRRQQRRGGYVEVNTPQ 301

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW+ SGHW+ Y+ NMF V+  ++  ++    ALKPMNCP HV +FN GLKSYR+L
Sbjct: 302 VVDRKLWEASGHWEKYQENMFIVEVDEEHAREKAVNALKPMNCPCHVQIFNQGLKSYRDL 361

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFGS  R EPSG+LHG+MRVRGFTQDDAH+FCT++Q+ +E  +    +  IY D 
Sbjct: 362 PLRMAEFGSCNRYEPSGALHGIMRVRGFTQDDAHIFCTEDQIESETARFIAFLSGIYADL 421

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF    V  STRP+ R GSD +WD AE+ +      +  +    I   V  GEGAFYGPK
Sbjct: 422 GFPNFEVLFSTRPDVRAGSDEVWDKAESAL------LSATRAAGIEPKVNPGEGAFYGPK 475

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ L DAIGR WQCGT QVDF LP R +A Y+ +   K  PVM+HRAV GS ERFIGI+
Sbjct: 476 LEFTLTDAIGRKWQCGTHQVDFVLPERLDANYIGTDGAKHRPVMLHRAVLGSFERFIGIL 535

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE   G LP WL+P Q +V +I S A +   ++A  L   ++  E D RNE INYK+REH
Sbjct: 536 IEEHSGRLPFWLAPRQVVVASIVSDADDCVTKVARNLTDLNIRAEADTRNEKINYKVREH 595

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPD 649
           S+ K+P+I+ CG +E  + ++ +RR G   ++ V L      L +E+ PPD
Sbjct: 596 SVGKVPVILACGPREVEDGTVSLRRLGEKDSRIVPLDQVAAELAREATPPD 646


>gi|254493203|ref|ZP_05106374.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
 gi|268598466|ref|ZP_06132633.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|226512243|gb|EEH61588.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
 gi|268582597|gb|EEZ47273.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
          Length = 637

 Score =  673 bits (1736), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 304/621 (48%), Positives = 437/621 (70%), Gaps = 15/621 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           + +T PD S++ +    T + +A SI   LAK AVA  +NGK+ D  DP+ E S ++IIT
Sbjct: 2   LNITLPDCSVRQYESPVTVAQIAASIGAGLAKAAVAGKVNGKLVDACDPIVEDSAVQIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A IE
Sbjct: 62  PKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M+E+IA+D   +K      +A ++F+ + E YK+ ++E +P  E + +Y   E+ D+C
Sbjct: 122 ARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLIEDMPEVEAMGMYHHQEYVDMC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+EK
Sbjct: 182 RGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKDYIQRIEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ ++  G++FWH KGW ++QT+  +MR+++    Y+E+ TPQ++D+
Sbjct: 241 RDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQTIEQHMRKELNAAGYKEVKTPQIMDK 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             W++SGHWD+Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+RL
Sbjct: 301 TFWEKSGHWDNYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRL 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF  
Sbjct: 355 AEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFHD 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + V+LS RPEKR GSD +WD AE  ++  L          +  G L GEGAFYGPK EY 
Sbjct: 415 VSVRLSLRPEKRAGSDDVWDKAEQGLREALTACG------VEWGELPGEGAFYGPKIEYH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+GR WQCGT+Q+DF LP R +A YV  ++++  PVM+HRA+ GS+ERF+GI+IEN 
Sbjct: 469 VKDALGRSWQCGTLQLDFVLPERLDAEYVTENNDRARPVMLHRAILGSLERFVGILIENH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G+ PLWL+P+Q ++  IT +  +Y +E+A  L++     E D RNE I YKIR++S  +
Sbjct: 529 AGSFPLWLAPVQMVIMNITENQADYCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQYR 588

Query: 603 IPIIIICGDKEASERSIGIRR 623
            P  I+ GDKE  E  + +RR
Sbjct: 589 FPYQIVIGDKEKQENKVAVRR 609


>gi|269213639|ref|ZP_05982445.2| threonine--tRNA ligase [Neisseria cinerea ATCC 14685]
 gi|269145722|gb|EEZ72140.1| threonine--tRNA ligase [Neisseria cinerea ATCC 14685]
          Length = 643

 Score =  672 bits (1735), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 301/621 (48%), Positives = 436/621 (70%), Gaps = 15/621 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           + +T PDGS++ +    T + +A SI   LAK  VA  +NGK+ D  DP+ E + ++IIT
Sbjct: 8   LNITLPDGSVRQYESPVTVAQIAASIGAGLAKATVAGKVNGKLVDACDPIAEDAHVQIIT 67

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+D   + +IRHSCAH++  AV+ ++P+ ++ IGP+IEDGFYYD   E+PF+ D++A IE
Sbjct: 68  PKDKEGVEIIRHSCAHLVGHAVKQLYPDAKMVIGPVIEDGFYYDIATEKPFTPDDVAAIE 127

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M+E+IA+D   +K      +  ++F+ + E YK+ ++E +P  E + +Y   E+ D+C
Sbjct: 128 ARMKELIAQDYDVIKVMTPRAETIKIFQDRGEEYKLRLIEDMPEVEAMGMYHHQEYVDMC 187

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +T  +K F KL K+AGAYWRGDSN  ML R+YGTAW ++ EL  Y+  +EE+EK
Sbjct: 188 RGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRVYGTAWASKDELKAYIQRIEEAEK 246

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ ++  G++FWH KGW ++Q +  +MR+++    Y+E+ TPQ++D+
Sbjct: 247 RDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDK 306

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             W++SGHW++Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+RL
Sbjct: 307 TFWEKSGHWENYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRL 360

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF  
Sbjct: 361 AEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVDEARAFNELLVRIYKQFGFHD 420

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + VKLS RPE+R GSD +WD AE  ++  L       ++      L GEGAFYGPK EY 
Sbjct: 421 VAVKLSLRPEQRAGSDEVWDKAEQGLRDALTACGVEWEE------LPGEGAFYGPKIEYH 474

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+GR WQCGT+Q+DF LP R NA YV   +++  PVM+HRA+ GS+ERFIGI+IEN 
Sbjct: 475 VKDALGRSWQCGTLQLDFVLPERLNAEYVTEKNDRARPVMLHRAILGSLERFIGILIENH 534

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G+ PLWL+P+Q ++  IT +  +Y +E+A  L++    +E D RNE I YKIR++S  +
Sbjct: 535 AGSFPLWLAPVQMVIMNITENQADYCREVAAKLQAAGFRVELDLRNEKIGYKIRDNSQYR 594

Query: 603 IPIIIICGDKEASERSIGIRR 623
            P  I+ GDKE  E  + +RR
Sbjct: 595 FPYQIVVGDKEKQENKVAVRR 615


>gi|240013609|ref|ZP_04720522.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae DGI18]
 gi|240112403|ref|ZP_04726893.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|240120679|ref|ZP_04733641.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae PID24-1]
          Length = 648

 Score =  672 bits (1735), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 304/621 (48%), Positives = 437/621 (70%), Gaps = 15/621 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           + +T PD S++ +    T + +A SI   LAK AVA  +NGK+ D  DP+ E S ++IIT
Sbjct: 13  LNITLPDCSVRQYESPVTVAQIAASIGAGLAKAAVAGKVNGKLVDACDPIVEDSAVQIIT 72

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A IE
Sbjct: 73  PKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAIE 132

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M+E+IA+D   +K      +A ++F+ + E YK+ ++E +P  E + +Y   E+ D+C
Sbjct: 133 ARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLIEDMPEVEAMGMYHHQEYVDMC 192

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+EK
Sbjct: 193 RGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKDYIQRIEEAEK 251

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ ++  G++FWH KGW ++QT+  +MR+++    Y+E+ TPQ++D+
Sbjct: 252 RDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQTIEQHMRKELNAAGYKEVKTPQIMDK 311

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             W++SGHWD+Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+RL
Sbjct: 312 TFWEKSGHWDNYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRL 365

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF  
Sbjct: 366 AEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFHD 425

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + V+LS RPEKR GSD +WD AE  ++  L          +  G L GEGAFYGPK EY 
Sbjct: 426 VSVRLSLRPEKRAGSDDVWDKAEQGLREALTACG------VEWGELPGEGAFYGPKIEYH 479

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+GR WQCGT+Q+DF LP R +A YV  ++++  PVM+HRA+ GS+ERF+GI+IEN 
Sbjct: 480 VKDALGRSWQCGTLQLDFVLPERLDAEYVTENNDRARPVMLHRAILGSLERFVGILIENH 539

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G+ PLWL+P+Q ++  IT +  +Y +E+A  L++     E D RNE I YKIR++S  +
Sbjct: 540 AGSFPLWLAPVQMVIMNITENQADYCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQYR 599

Query: 603 IPIIIICGDKEASERSIGIRR 623
            P  I+ GDKE  E  + +RR
Sbjct: 600 FPYQIVIGDKEKQENKVAVRR 620


>gi|34496803|ref|NP_901018.1| threonyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472]
 gi|73919781|sp|Q7NYC6|SYT_CHRVO RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|34102658|gb|AAQ59023.1| threonyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472]
          Length = 633

 Score =  672 bits (1735), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/649 (50%), Positives = 448/649 (69%), Gaps = 20/649 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP DI+L  PDGS+++F    T  +VA SI   LA+ A+A  ++G++ D S  + R   +
Sbjct: 1   MP-DIRL--PDGSVRSFDKPVTVHEVAASIGAGLARAALAGRVDGQLVDTSYLIDRNADL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            I+T +D   L+VIRHS AH++A AV+ ++PE QV IGP IE+GFYYDF  ++PF+ ++L
Sbjct: 58  AIVTDKDADGLSVIRHSTAHLLAYAVKELFPEAQVTIGPEIENGFYYDFAYKRPFTPEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A IEKKM E+  +D P  +  L  ++A   F+S  EAYK EI+ESIP  E ++LYR+GE+
Sbjct: 118 AAIEKKMAELAKKDIPVERYELPRDEAIAYFKSIGEAYKAEIIESIPQGEVLSLYREGEF 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV STG++K  FKLMKVAGAYWRGDS   ML R+YGTAW  +++L  YLY LE
Sbjct: 178 TDLCRGPHVPSTGKLK-VFKLMKVAGAYWRGDSKNEMLQRVYGTAWAKKEDLDAYLYMLE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+EKRDHRKL  ++DLFH+ ++  G++FWH KGW+++Q +  YMR K+  + Y+E+ TP 
Sbjct: 237 EAEKRDHRKLGVQLDLFHLQDEAPGMVFWHPKGWQLWQNVEQYMRAKLNHEGYKEVRTPM 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D +LW++SGH  +YR NMF       T  + R +A+KPMNCPGHV +FN GL+SYR+L
Sbjct: 297 MMDANLWERSGHAANYRENMFI------TESEKRDYAVKPMNCPGHVQIFNSGLRSYRDL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R AEFGS +RNEPSG+LHG+MRVRGF QDD H+FCT++Q+  E    H L++ +Y  F
Sbjct: 351 PLRYAEFGSCHRNEPSGALHGIMRVRGFVQDDGHIFCTEDQINQEAKDFHRLVMEVYDRF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+K+ +KL+ RPEKR+G ++ WD AE  M+  L       ++      L GEGAFYGPK
Sbjct: 411 GFDKVAIKLALRPEKRIGEESTWDKAEEGMREALRACGVEWEE------LPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            EY +KDA+GR WQCGT+Q+DF LP R +A YV   + +  PVM+HRA  GS+ERF+GI+
Sbjct: 465 IEYHIKDALGRSWQCGTLQLDFMLPERLDAEYVADDNSRKRPVMLHRAALGSLERFLGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IEN  G  PLWL+P+Q +V  IT +  EYA EIA  L+     +E D RNE I YKIREH
Sbjct: 525 IENHAGAFPLWLAPVQMVVMNITEAQAEYAAEIAKELEKQGFRVELDLRNEKIGYKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLP 647
           S++K+P  II GDKE ++  + +R  G    Q    L+A     K  +P
Sbjct: 585 SLQKLPYQIIVGDKEKADGLVAVRARGEDLGQLT--LEAFAARLKAEMP 631


>gi|170732802|ref|YP_001764749.1| threonyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
 gi|238688618|sp|B1K091|SYT_BURCC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|169816044|gb|ACA90627.1| threonyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
          Length = 635

 Score =  672 bits (1735), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 308/625 (49%), Positives = 434/625 (69%), Gaps = 15/625 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           + +  PDGS++ +    T ++VA SI   LAK A+   ++G++ D S  + R+ S+ I+T
Sbjct: 2   VSIRLPDGSVRQYEHPVTVAEVAASIGPGLAKAALGGKLDGELVDTSTVIDRDASLAIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   L +IRHS AH++A AV+ ++P+ QV IGP+I++GFYYDF   +PF+ ++L +IE
Sbjct: 62  DKDADGLDIIRHSTAHLLAYAVKELYPDAQVTIGPVIDNGFYYDFSYNRPFTPEDLEKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+MQE+  +D P  ++ +S ++A   F S  E YK EI+ESIP  + + LY  G + DLC
Sbjct: 122 KRMQELAKKDEPVTRRVVSRDEAAGYFRSIGEKYKAEIIESIPQSDEIKLYSHGGFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV STG++K  FKLMKVAGAYWRGDS    L RIYGTAW  +++  QYL+ LEE+EK
Sbjct: 182 RGPHVPSTGKLK-VFKLMKVAGAYWRGDSKNEQLQRIYGTAWTKKEDQDQYLHMLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ E+  G++FWH KGW ++Q +  YMRR++ +  Y EI TP ++D+
Sbjct: 241 RDHRKLGKQLDLFHMQEESPGMVFWHPKGWALWQQVEQYMRRRVNEAGYLEIKTPMIMDR 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW +YR NMF       T  + R +A+KPMNCPGHV VF HGL+SYR+LP+R 
Sbjct: 301 SLWEASGHWQNYRENMFT------TESEKRDYAIKPMNCPGHVQVFKHGLRSYRDLPLRY 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNE SG+LHGLMRVRGF QDDAH+FCT++Q  +E +  + L +S+YKDFGF+ 
Sbjct: 355 AEFGSCHRNEASGALHGLMRVRGFVQDDAHIFCTEDQFISESIAFNTLAMSVYKDFGFDH 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I +KLS RP++R G+D  W  AE  ++  L     + ++      L GEGAFYGPK EY 
Sbjct: 415 IDIKLSLRPDQRAGTDETWARAEQGLRDALTACGLTWEE------LPGEGAFYGPKIEYH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+GR WQCGT+Q+D  LP R  A YV   + +  PVM+HRA+ GS+ERF+GI+IE+ 
Sbjct: 469 IKDALGRSWQCGTLQLDMVLPERLGAEYVAEDNSRRRPVMLHRAIVGSMERFLGILIEHH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G +P+WL+P QAIV  I  S  EYAQ +   L+   + +  D RNE I+YKIREH+++K
Sbjct: 529 AGAMPVWLAPYQAIVLNIAESQAEYAQSLTQTLQKQGVRVAADLRNEKISYKIREHTLEK 588

Query: 603 IPIIIICGDKEASERSIGIRRFGST 627
           +P +++ GDKE   +++ +R  G  
Sbjct: 589 VPYLLVVGDKERDAQTVAVRARGGV 613


>gi|186476316|ref|YP_001857786.1| threonyl-tRNA synthetase [Burkholderia phymatum STM815]
 gi|238691316|sp|B2JJJ7|SYT_BURP8 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|184192775|gb|ACC70740.1| threonyl-tRNA synthetase [Burkholderia phymatum STM815]
          Length = 635

 Score =  672 bits (1735), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 305/624 (48%), Positives = 439/624 (70%), Gaps = 15/624 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           + +  PDGS++ +    T ++VA SI   LAK A+   I+G++ D S  +  + ++ I+T
Sbjct: 2   VSIRLPDGSVRQYEHPVTVAEVAASIGPGLAKAALGGKIDGELVDTSALIDHDVALAIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   L +IRHS AH++A AV+ ++PE QV IGP+I++GFYYDF   +PF+ ++L +IE
Sbjct: 62  DKDADGLDIIRHSTAHLLAYAVKDLFPEAQVTIGPVIDNGFYYDFSYSRPFTPEDLEKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+MQE+  +D P  ++ +S ++A + F+S  E YK EI+ESIPA +++ LY  G + DLC
Sbjct: 122 KRMQELAKKDEPVSRRVVSRDEAADYFKSIGEKYKAEIIESIPASDDIKLYSHGGFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV STG++K  FKLMKVAGAYWRGDS    L RIYGTAW  +++   YL+ LEE+EK
Sbjct: 182 RGPHVPSTGKLK-VFKLMKVAGAYWRGDSKNEQLQRIYGTAWTKKEDQDAYLHMLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ ++  G++FWH +GW ++Q +  YMRR++ +  Y EI TP ++D+
Sbjct: 241 RDHRKLGKQLDLFHMQDESPGMVFWHPRGWTLWQQVEQYMRRRVNEAGYLEIKTPMIMDR 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW +YR NMF       T  + R +A+KPMNCPGHV VFNHGL+SYR+LP+R 
Sbjct: 301 SLWEASGHWQNYRDNMFT------TESEKRDYAIKPMNCPGHVQVFNHGLRSYRDLPLRY 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNE SG+LHGLMRVRGF QDDAH+FCT++Q  +E +  + L +S+YKDFGF+ 
Sbjct: 355 AEFGSCHRNESSGALHGLMRVRGFVQDDAHIFCTEDQFISESIAFNTLAMSVYKDFGFDN 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + +KLS RP+ R G+D +WD AE  ++  L     + ++      L GEGAFYGPK EY 
Sbjct: 415 VEIKLSLRPDARAGTDEIWDRAEQGLRDALTACGVTWEE------LPGEGAFYGPKVEYH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+GR WQCGT+Q+D  LP R  A +V   + +  P+M+HRA+ GS+ERF+GI+IE+ 
Sbjct: 469 IKDALGRSWQCGTLQLDMVLPERLGAEFVAEDNSRRRPIMLHRAIVGSMERFLGILIEHH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G +P WL+P+Q +V  I  S  EYAQ +A  L+   + +E D RNE I+YKIREH+++K
Sbjct: 529 AGAMPAWLAPMQVVVMNIAESQAEYAQSLAQSLQKQGVRVEADLRNEKISYKIREHTLEK 588

Query: 603 IPIIIICGDKEASERSIGIRRFGS 626
           +P +++ GDKE   +++ +R  G 
Sbjct: 589 VPYLLVVGDKERDAQTVAVRARGG 612


>gi|300703878|ref|YP_003745480.1| threonine tRNA synthetase [Ralstonia solanacearum CFBP2957]
 gi|299071541|emb|CBJ42865.1| threonine tRNA synthetase [Ralstonia solanacearum CFBP2957]
          Length = 635

 Score =  672 bits (1735), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 320/638 (50%), Positives = 438/638 (68%), Gaps = 21/638 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           I +T PDGS + FP   T ++VA+SI   LAK A+A  I+G + D S  + +   + I+T
Sbjct: 2   IAITLPDGSRREFPGPVTVAEVAQSIGAGLAKAALAGRIDGHLVDTSFKIEQSVDLAIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   + VIRHS AH++A AV+ ++P+ QV IGP+IE+GFYYDF  ++PF+ ++LA IE
Sbjct: 62  DKDADGVDVIRHSTAHLLAYAVKELYPDAQVTIGPVIENGFYYDFAYKRPFTPEDLAAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           KKM E+  +D    ++    ++A +LFE   E YK EI+ SIP  + + LYR+G + DLC
Sbjct: 122 KKMAELAKKDEKVTREVWRRDEAVKLFEGMGEKYKAEIIGSIPEDQEIGLYREGSFVDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV STG++K  FKLMKVAGAYWRGDSN  ML RIYGTAW  +++   YL+ LEE+EK
Sbjct: 182 RGPHVPSTGKLK-VFKLMKVAGAYWRGDSNNEMLQRIYGTAWAKKEDQEAYLHMLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ E+  G++FWH KGW+I+Q +  YMR ++    Y E+ TPQV+D+
Sbjct: 241 RDHRKLGKQLDLFHLQEEAPGMVFWHPKGWQIWQAVEQYMRGRLAGAGYSEVRTPQVMDR 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW +Y+ NMF       T  + R +A+KPMNCPGHV +FNHGL+SYR+LP+RL
Sbjct: 301 TLWEHSGHWQNYKENMFV------TESEKREYAIKPMNCPGHVQIFNHGLRSYRDLPLRL 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFG+ +RNEPSG+LHGLMRVRGF QDDAH+FCT+ Q+  E    ++L  S+Y+DFGFE 
Sbjct: 355 AEFGACHRNEPSGALHGLMRVRGFVQDDAHIFCTEGQIMAEAKDFNDLAFSVYEDFGFEN 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + VKL+ RP+KR G+D +WD AE  ++  L       ++      L GEGAFYGPK EY 
Sbjct: 415 VAVKLALRPDKRAGTDEIWDHAEEGLRTALRACGVEWEE------LPGEGAFYGPKVEYH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDAIGR WQCGT+Q+D  LP R  A YV+  + +  PVM+HRA+ GS ERF+GI++EN 
Sbjct: 469 IKDAIGRSWQCGTLQLDLVLPERLGAEYVSEDNSRKRPVMLHRAILGSFERFLGILLENH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G LPLWL+P Q +V +I  +  EY Q +A  L+        D RNE I YKIREHS++K
Sbjct: 529 AGALPLWLAPEQVVVMSIADAHAEYVQTVAQSLQKQGFRASADLRNEKITYKIREHSLQK 588

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
           +P +++ GDKE     + +R  G+        L ++PI
Sbjct: 589 VPYLVVVGDKERDGNQVAVRARGNVD------LGSMPI 620


>gi|170695920|ref|ZP_02887060.1| threonyl-tRNA synthetase [Burkholderia graminis C4D1M]
 gi|170139218|gb|EDT07406.1| threonyl-tRNA synthetase [Burkholderia graminis C4D1M]
          Length = 635

 Score =  672 bits (1735), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 308/625 (49%), Positives = 435/625 (69%), Gaps = 15/625 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           + +  PDGS++ +    T ++VA SI   LAK A+   I+G++ D S  +  + S+ IIT
Sbjct: 2   VSIRLPDGSVRQYEHPVTVAEVAASIGPGLAKAALGGKIDGELVDTSTLIDHDVSLAIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   L +IRHS AH++A AV+ ++PE QV IGP+I++GFYYDF   +PF+ ++L +IE
Sbjct: 62  EKDADGLDIIRHSTAHLLAYAVKDLYPEAQVTIGPVIDNGFYYDFAYSRPFTPEDLEKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+MQE+  +D P  ++ +S  +A + F+S  E YK EI+ESIPA + + LY  G + DLC
Sbjct: 122 KRMQELAKKDEPVSRRVVSRGEAVDYFKSIGEKYKAEIIESIPATDEIKLYSHGGFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV STG++K  FKLMKVAGAYWRGDS    L RIYGTAW  +++   YL+ LEE+EK
Sbjct: 182 RGPHVPSTGKLK-VFKLMKVAGAYWRGDSKNEQLQRIYGTAWTKKEDQEAYLHMLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ ++  G++FWH +GW ++Q +  YMRR++ D  Y EI TP ++D+
Sbjct: 241 RDHRKLGKQLDLFHMQDESPGMVFWHPRGWTLWQQVEQYMRRRVNDAGYLEIKTPMIMDR 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW +YR NMF       T  + R +A+KPMNCPGHV VFNHGL+SYR+LP+R 
Sbjct: 301 SLWEASGHWQNYRENMFT------TESEKRDYAIKPMNCPGHVQVFNHGLRSYRDLPLRY 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNE SG+LHGLMRVRGF QDDAH+FCT++Q  +E +  + L +S+Y DFGF+ 
Sbjct: 355 AEFGSCHRNESSGALHGLMRVRGFVQDDAHIFCTEDQFISESIAFNTLAMSVYSDFGFDH 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + +KLS RP+ R G+D  WD AE  ++  L     + ++      L GEGAFYGPK EY 
Sbjct: 415 VEIKLSLRPDARAGTDETWDRAEQGLREALTACGVTWEE------LPGEGAFYGPKVEYH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+GR WQCGT+Q+D  LP R  A YV   + +  P+M+HRA+ GS+ERF+GI+IE+ 
Sbjct: 469 IKDALGRSWQCGTLQLDMVLPERLGAEYVAEDNSRRRPIMLHRAIVGSMERFLGILIEHH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G +P WL+P+Q +V  I  S  EYAQ +A  L+   + +E D RNE I+YKIREH+++K
Sbjct: 529 AGAMPAWLAPMQVVVMNIAESQAEYAQSLAQSLQKQGVRVEADLRNEKISYKIREHTLEK 588

Query: 603 IPIIIICGDKEASERSIGIRRFGST 627
           +P +++ GDKE   +++ +R  G  
Sbjct: 589 VPYLLVVGDKEREAQTVAVRARGGV 613


>gi|304387978|ref|ZP_07370150.1| threonine--tRNA ligase [Neisseria meningitidis ATCC 13091]
 gi|304337977|gb|EFM04115.1| threonine--tRNA ligase [Neisseria meningitidis ATCC 13091]
          Length = 643

 Score =  672 bits (1734), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 302/621 (48%), Positives = 439/621 (70%), Gaps = 15/621 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           + +T PDGS++ +    T + +A SI   LAK AVA  +NGK+ D  DP+ E S ++IIT
Sbjct: 8   LNITLPDGSVRQYESPVTVAQIAASIGVGLAKAAVAGRVNGKLVDACDPIVEDSAVQIIT 67

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A IE
Sbjct: 68  PKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAIE 127

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M+E+IA+D   +K      +A ++F+ + E YK+ +++ +P  E + +Y   E+ D+C
Sbjct: 128 ARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLIDDMPEVEAMGMYHHQEYVDMC 187

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+EK
Sbjct: 188 RGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKAYIQRIEEAEK 246

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ ++  G++FWH KGW ++Q +  +MR+++    Y+E+ TPQ++D+
Sbjct: 247 RDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDK 306

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             W++SGHW++Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+RL
Sbjct: 307 TFWEKSGHWENYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRL 360

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF  
Sbjct: 361 AEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFHD 420

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + VKLS RPE+R GSD +WD AE  ++  L          +  G L GEGAFYGPK EY 
Sbjct: 421 VSVKLSLRPEQRAGSDDVWDKAEQGLREALTACG------VEWGELPGEGAFYGPKIEYH 474

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           ++DA+GR WQCGT+Q+DF LP R +A YV  ++++  PVM+HRA+ GS+ERFIGI+IEN+
Sbjct: 475 VRDALGRSWQCGTLQLDFVLPERLDAEYVTENNDRARPVMLHRAILGSLERFIGILIENY 534

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G+ PLWL+P+Q ++  IT +  +Y +E+A  L++    +E D RNE I YKIR++S  +
Sbjct: 535 AGSFPLWLAPVQLVIMNITENQADYCREVAAKLQAAGFRVELDLRNEKIGYKIRDNSQYR 594

Query: 603 IPIIIICGDKEASERSIGIRR 623
            P  I+ GDKE  E  + +RR
Sbjct: 595 FPYQIVVGDKEKQENKVAVRR 615


>gi|194098020|ref|YP_002001068.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae NCCP11945]
 gi|193933310|gb|ACF29134.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae NCCP11945]
          Length = 648

 Score =  672 bits (1734), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 304/621 (48%), Positives = 437/621 (70%), Gaps = 15/621 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           + +T PD S++ +    T + +A SI   LAK AVA  +NGK+ D  DP+ E S ++IIT
Sbjct: 13  LNITLPDCSVRQYESPVTVAQIAASIGAGLAKAAVAGKVNGKLVDACDPIVEDSAVQIIT 72

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A IE
Sbjct: 73  PKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAIE 132

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M+E+IA+D   +K      +A ++F+ + E YK+ ++E +P  E + +Y   E+ D+C
Sbjct: 133 ARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLIEDMPEVEAMGIYHHQEYVDMC 192

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+EK
Sbjct: 193 RGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKDYIQRIEEAEK 251

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ ++  G++FWH KGW ++QT+  +MR+++    Y+E+ TPQ++D+
Sbjct: 252 RDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQTIEQHMRKELNAAGYKEVKTPQIMDK 311

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             W++SGHWD+Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+RL
Sbjct: 312 TFWEKSGHWDNYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRL 365

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF  
Sbjct: 366 AEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFHD 425

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + V+LS RPEKR GSD +WD AE  ++  L          +  G L GEGAFYGPK EY 
Sbjct: 426 VSVRLSLRPEKRAGSDDVWDKAEQGLREALTACG------VEWGELPGEGAFYGPKIEYH 479

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+GR WQCGT+Q+DF LP R +A YV  ++++  PVM+HRA+ GS+ERF+GI+IEN 
Sbjct: 480 VKDALGRSWQCGTLQLDFVLPERLDAEYVTENNDRARPVMLHRAILGSLERFVGILIENH 539

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G+ PLWL+P+Q ++  IT +  +Y +E+A  L++     E D RNE I YKIR++S  +
Sbjct: 540 AGSFPLWLAPVQMVIMNITENQADYCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQYR 599

Query: 603 IPIIIICGDKEASERSIGIRR 623
            P  I+ GDKE  E  + +RR
Sbjct: 600 FPYQIVIGDKEKQENKVAVRR 620


>gi|260219598|emb|CBA26443.1| Threonyl-tRNA synthetase [Curvibacter putative symbiont of Hydra
           magnipapillata]
          Length = 665

 Score =  672 bits (1734), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 323/619 (52%), Positives = 426/619 (68%), Gaps = 23/619 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAING--------KVCDLS-DPVR 55
           I +T PDGS + FP   T ++VA SI   LAK A+A  +          KV D S     
Sbjct: 23  IHITLPDGSKREFPGPVTVAEVAASIGTGLAKAALAGKVRAEGESADAAKVVDTSFQMTA 82

Query: 56  EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFS 115
           + ++ IIT +D   L VIRHS AH++A AV+ ++P+ QV IGP+IE GF+YDF  ++PF+
Sbjct: 83  DSALSIITAKDADGLEVIRHSTAHLLAYAVKELFPDAQVTIGPVIEHGFFYDFSYKRPFT 142

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            ++LA IEKKM E+  +D P +++ L  + A E F+S  E YK EI+ SIPA E+V+LYR
Sbjct: 143 PEDLAAIEKKMTELANKDEPVVRRVLPRDDAVEYFKSLGEQYKAEIIASIPANEDVSLYR 202

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
           +G + DLCRGPHV STG++K F KLMKVAGAYWRGD    ML RIYGTAW T+ EL Q+L
Sbjct: 203 EGNFEDLCRGPHVPSTGKLKHF-KLMKVAGAYWRGDHRNEMLQRIYGTAWATKDELQQHL 261

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEI 294
             LEE+EKRDHRKL RE+DLFHI E   G +FWH KGW ++Q +  YMR+  +D+ Y E+
Sbjct: 262 TMLEEAEKRDHRKLGRELDLFHIDEHSPGTVFWHPKGWTLWQGVEQYMRKVYQDNGYLEV 321

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
             PQ++D+ LW+++GHWD YR NMF       T  + R +ALKPMNCPGH+ ++  G+KS
Sbjct: 322 KGPQIIDKSLWEKTGHWDKYRENMFT------TESEKRDYALKPMNCPGHILIYKQGIKS 375

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YR+LP+R  EFG  +RNEPSG LHG+MRVR FTQDD H+FCT++Q+ +E      L+  +
Sbjct: 376 YRDLPLRFGEFGQCHRNEPSGGLHGIMRVRAFTQDDGHIFCTEDQIQDEVKAFTTLLQKV 435

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           YKDFGF  I+ KLSTRPEKR+G++  WD AEN +    + ++ S  D      L GEGAF
Sbjct: 436 YKDFGFTNIIYKLSTRPEKRIGTEEGWDRAENALA---EGLRASGCD---FEYLPGEGAF 489

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK EY LKDA+GR WQCGTIQVD NLP R +A +V     +  PVM+HRA+ GS+ERF
Sbjct: 490 YGPKIEYTLKDALGRPWQCGTIQVDPNLPERLDAEFVGEDGSRHRPVMLHRAIVGSLERF 549

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
           IGI+IE   G LP WL+P+Q  V  IT +  +YA+ +A  L++  L +  D RNE I YK
Sbjct: 550 IGILIEESAGALPAWLAPVQVAVLNITDAQADYARSVAKTLQNQGLRVHLDLRNEKITYK 609

Query: 595 IREHSIKKIPIIIICGDKE 613
           IREHS++K+P +++ GDKE
Sbjct: 610 IREHSMQKLPYLVVIGDKE 628


>gi|261392911|emb|CAX50492.1| threonyl-tRNA synthetase (threonine--tRNA ligase; ThrRS) [Neisseria
           meningitidis 8013]
 gi|325203807|gb|ADY99260.1| threonyl-tRNA synthetase [Neisseria meningitidis M01-240355]
          Length = 637

 Score =  672 bits (1734), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 301/621 (48%), Positives = 439/621 (70%), Gaps = 15/621 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           + +T PDGS++ +    T + +A SI   LA+ AVA  +NGK+ D  DP+ E S ++IIT
Sbjct: 2   LNITLPDGSVRQYESPVTVAQIAASIGVGLARAAVAGRVNGKLVDACDPIVEDSAVQIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A IE
Sbjct: 62  PKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M+E+IA+D   +K      +A ++F+ + E YK+ +++ +P  E + +Y   E+ D+C
Sbjct: 122 ARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLIDDMPEVEAMGMYHHQEYVDMC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+EK
Sbjct: 182 RGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKAYIQRIEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ ++  G++FWH KGW ++Q +  +MR+++    Y+E+ TPQ++D+
Sbjct: 241 RDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDK 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             W++SGHW++Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+RL
Sbjct: 301 TFWEKSGHWENYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRL 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF  
Sbjct: 355 AEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFHD 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + VKLS RPE+R GSD +WD AE  ++  L          +  G L GEGAFYGPK EY 
Sbjct: 415 VSVKLSLRPEQRAGSDDVWDKAEQGLREALTACG------VEWGELPGEGAFYGPKIEYH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           ++DA+GR WQCGT+Q+DF LP R +A YV  ++++  PVM+HRA+ GS+ERFIGI+IEN+
Sbjct: 469 VRDALGRSWQCGTLQLDFVLPERLDAEYVTENNDRARPVMLHRAILGSLERFIGILIENY 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G+ PLWL+P+Q ++  IT +  +Y +E+A  L++    +E D RNE I YKIR++S  +
Sbjct: 529 AGSFPLWLAPVQLVIMNITENQADYCREVAAKLQAAGFRVELDLRNEKIGYKIRDNSQYR 588

Query: 603 IPIIIICGDKEASERSIGIRR 623
            P  I+ GDKE  E  + +RR
Sbjct: 589 FPYQIVVGDKEKQENKVAVRR 609


>gi|284799642|ref|ZP_05984463.2| threonine--tRNA ligase [Neisseria subflava NJ9703]
 gi|284797591|gb|EFC52938.1| threonine--tRNA ligase [Neisseria subflava NJ9703]
          Length = 643

 Score =  672 bits (1734), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 300/621 (48%), Positives = 436/621 (70%), Gaps = 15/621 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           + +T PDGS++ +    T + +A SI   LAK  VA  +NGK+ D  DP+ E + ++IIT
Sbjct: 8   LNITLPDGSVRQYESPVTVAQIAASIGAGLAKATVAGKVNGKLVDACDPITEDAHVQIIT 67

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+D   + +IRHSCAH++  AV+ ++P+ ++ IGP+IEDGFYYD   E+PF+ D++A IE
Sbjct: 68  PKDKEGVEIIRHSCAHLVGHAVKQLYPDAKMVIGPVIEDGFYYDIATEKPFTPDDVAAIE 127

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M+E+IA+D   +K      +  ++F+ + E YK+ ++E +P  E + +Y   E+ D+C
Sbjct: 128 ARMKELIAQDYDVIKVMTPRAETVKIFQDRGEEYKLRLIEDMPEVEAMGMYHHQEYVDMC 187

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +T  +K F KL K+AGAYWRGDSN  ML R+YGTAW ++ EL  Y+  +EE+EK
Sbjct: 188 RGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRVYGTAWASKDELKAYIQRIEEAEK 246

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ ++  G++FWH KGW ++Q +  +MR+++    Y+E+ TPQ++D+
Sbjct: 247 RDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDK 306

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             W++SGHW++Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+RL
Sbjct: 307 TFWEKSGHWENYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRL 360

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHGLMRVRGF QDDAH+FC ++Q+ +E    + L++ IYK FGF  
Sbjct: 361 AEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCAEDQIVDEARAFNELLVRIYKQFGFHD 420

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + VKLS RPE+R GSD +WD AE  ++  L       ++      L GEGAFYGPK EY 
Sbjct: 421 VAVKLSLRPEQRAGSDEVWDKAEQGLRDALTACGVEWEE------LPGEGAFYGPKIEYH 474

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+GR WQCGT+Q+DF LP R NA YV  ++++  PVM+HRA+ GS+ERFIGI+IEN 
Sbjct: 475 VKDALGRSWQCGTLQLDFVLPERLNAEYVTENNDRARPVMLHRAILGSLERFIGILIENH 534

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G+ PLWL+P+Q ++  IT +  +Y +E+A  L++    +E D RNE I YKIR++S  +
Sbjct: 535 AGSFPLWLAPVQMVIMNITENQADYCREVAAKLQAAGFRVELDLRNEKIGYKIRDNSQYR 594

Query: 603 IPIIIICGDKEASERSIGIRR 623
            P  I+ GDKE  E  + +RR
Sbjct: 595 FPYQIVVGDKEKQENKVAVRR 615


>gi|240127689|ref|ZP_04740350.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae
           SK-93-1035]
          Length = 648

 Score =  672 bits (1734), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 304/621 (48%), Positives = 437/621 (70%), Gaps = 15/621 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           + +T PD S++ +    T + +A SI   LAK AVA  +NGK+ D  DP+ E S ++IIT
Sbjct: 13  LNITLPDCSVRQYESPVTVAQIAASIGAGLAKAAVAGKVNGKLVDACDPIVEDSAVQIIT 72

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A IE
Sbjct: 73  PKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAIE 132

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M+E+IA+D   +K      +A ++F+ + E YK+ +++ +P  E + +Y   E+ D+C
Sbjct: 133 ARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLIDDMPEVEAMGIYHHQEYVDMC 192

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+EK
Sbjct: 193 RGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKAYIQRIEEAEK 251

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ ++  G++FWH KGW ++QT+  +MR+++    Y+E+ TPQ++D+
Sbjct: 252 RDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQTIEQHMRKELNAAGYKEVKTPQIMDK 311

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             W++SGHWD+Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+RL
Sbjct: 312 TFWEKSGHWDNYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRL 365

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF  
Sbjct: 366 AEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFHD 425

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + V+LS RPEKR GSD +WD AE  ++  L          +  G L GEGAFYGPK EY 
Sbjct: 426 VSVRLSLRPEKRAGSDDVWDKAEQGLREALTACG------VEWGELPGEGAFYGPKIEYH 479

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+GR WQCGT+Q+DF LP R +A YV  ++++  PVM+HRA+ GS+ERFIGI+IEN 
Sbjct: 480 VKDALGRSWQCGTLQLDFVLPERLDAEYVTENNDRARPVMLHRAILGSLERFIGILIENH 539

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G+ PLWL+P+Q ++  IT +  +Y +E+A  L++     E D RNE I YKIR++S  +
Sbjct: 540 AGSFPLWLAPVQMVIMNITENQADYCREVAAKLQAADFRAELDLRNEKIGYKIRDNSQYR 599

Query: 603 IPIIIICGDKEASERSIGIRR 623
            P  I+ GDKE  E  + +RR
Sbjct: 600 FPYQIVIGDKEKQENKVAVRR 620


>gi|218767842|ref|YP_002342354.1| putative threonyl-tRNA synthetase [Neisseria meningitidis Z2491]
 gi|22654142|sp|Q9JVA3|SYT_NEIMA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|121051850|emb|CAM08156.1| putative threonyl-tRNA synthetase [Neisseria meningitidis Z2491]
          Length = 637

 Score =  672 bits (1733), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 302/621 (48%), Positives = 438/621 (70%), Gaps = 15/621 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           + +T PDGS++ +    T + +A SI   LAK AVA  +NGK+ D  DP+ E S ++IIT
Sbjct: 2   LNITLPDGSVRQYESPVTVAQIAASIGAGLAKAAVAGRVNGKLVDACDPIVEDSAVQIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A IE
Sbjct: 62  PKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M+E+IA+D   +K      +A ++F+ + E YK+ +++ +P  E + +Y   E+ D+C
Sbjct: 122 ARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLIDDMPEVEAMGMYHHQEYVDMC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+EK
Sbjct: 182 RGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKAYIQRIEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ ++  G++FWH KGW ++Q +  +MR+++    Y+E+ TPQ++D+
Sbjct: 241 RDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDK 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             W++SGHW++Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+RL
Sbjct: 301 TFWEKSGHWENYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRL 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF  
Sbjct: 355 AEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFHD 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + VKLS RPE+R GSD +WD AE  ++  L          +  G L GEGAFYGPK EY 
Sbjct: 415 VSVKLSLRPEQRAGSDDVWDKAEQGLREALTACG------VEWGELPGEGAFYGPKIEYH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           ++DA+GR WQCGT+Q+DF LP R +A YV  ++++  PVM+HRA+ GS+ERFIGI+IEN 
Sbjct: 469 VRDALGRSWQCGTLQLDFVLPERLDAEYVTENNDRARPVMLHRAILGSLERFIGILIENH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G+ PLWL+P+Q ++  IT +  +Y +E+A  L++    +E D RNE I YKIR++S  +
Sbjct: 529 AGSFPLWLAPVQLVIMNITENQADYCREVAAKLQAAGFRVELDLRNEKIGYKIRDNSQYR 588

Query: 603 IPIIIICGDKEASERSIGIRR 623
            P  I+ GDKE  E  + +RR
Sbjct: 589 FPYQIVVGDKEKQENKVAVRR 609


>gi|240080190|ref|ZP_04724733.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
          Length = 648

 Score =  672 bits (1733), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 304/621 (48%), Positives = 437/621 (70%), Gaps = 15/621 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           + +T PD S++ +    T + +A SI   LAK AVA  +NGK+ D  DP+ E S ++IIT
Sbjct: 13  LNITLPDCSVRQYESPVTVAQIAASIGAGLAKAAVAGKVNGKLVDACDPIVEDSAVQIIT 72

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A IE
Sbjct: 73  PKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAIE 132

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M+E+IA+D   +K      +A ++F+ + E YK+ +++ +P  E + +Y   E+ D+C
Sbjct: 133 ARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLIDDMPEVEAMGIYHHQEYVDMC 192

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+EK
Sbjct: 193 RGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKDYIQRIEEAEK 251

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ ++  G++FWH KGW ++QT+  +MR+++    Y+E+ TPQ++D+
Sbjct: 252 RDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQTIEQHMRKELNAAGYKEVKTPQIMDK 311

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             W++SGHWD+Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+RL
Sbjct: 312 TFWEKSGHWDNYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRL 365

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF  
Sbjct: 366 AEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFHD 425

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + V+LS RPEKR GSD +WD AE  ++  L          +  G L GEGAFYGPK EY 
Sbjct: 426 VSVRLSLRPEKRAGSDDVWDKAEQGLREALTACG------VEWGELPGEGAFYGPKIEYR 479

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+GR WQCGT+Q+DF LP R +A YV  ++++  PVM+HRA+ GS+ERFIGI+IEN 
Sbjct: 480 VKDALGRSWQCGTLQLDFVLPERLDAEYVTENNDRARPVMLHRAILGSLERFIGILIENH 539

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G+ PLWL+P+Q ++  IT +  +Y +E+A  L++     E D RNE I YKIR++S  +
Sbjct: 540 AGSFPLWLAPVQMVIMNITENQADYCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQYR 599

Query: 603 IPIIIICGDKEASERSIGIRR 623
            P  I+ GDKE  E  + +RR
Sbjct: 600 FPYQIVIGDKEKQENKVAVRR 620


>gi|296163127|ref|ZP_06845898.1| threonyl-tRNA synthetase [Burkholderia sp. Ch1-1]
 gi|295886629|gb|EFG66476.1| threonyl-tRNA synthetase [Burkholderia sp. Ch1-1]
          Length = 635

 Score =  672 bits (1733), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 305/625 (48%), Positives = 437/625 (69%), Gaps = 15/625 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           + +  PDGS++ +    T ++VA SI   LAK A+   I+G++ D S  +  + ++ I+T
Sbjct: 2   VSIRLPDGSVRQYEHPVTVAEVAASIGPGLAKAALGGKIDGELVDTSALIDHDVALAIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   L +IRHS AH++A AV+ ++PE QV IGP+I++GFYYDF   +PF+ ++L +IE
Sbjct: 62  EKDADGLDIIRHSTAHLLAYAVKDLYPEAQVTIGPVIDNGFYYDFAYNRPFTPEDLEKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           ++MQE+  +D P  ++ +S ++A + F+S  E YK EI+ESIPA + + LY  G + DLC
Sbjct: 122 RRMQELAKKDEPVSRRVVSRDEAVDYFKSIGEKYKAEIIESIPATDEIKLYSHGGFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV STG++K  FKLMKVAGAYWRGDS    L RIYGTAW  +++   YL+ LEE+EK
Sbjct: 182 RGPHVPSTGKLK-VFKLMKVAGAYWRGDSKNEQLQRIYGTAWTKKEDQEAYLHMLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ ++  G++FWH +GW ++Q +  YMRR++ D  Y EI TP ++D+
Sbjct: 241 RDHRKLGKQLDLFHMQDESPGMVFWHPRGWTLWQQVEQYMRRRVNDAGYLEIKTPMIMDR 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW +YR NMF       T  + R +A+KPMNCPGHV VFNHGL+SYR+LP+R 
Sbjct: 301 SLWEASGHWQNYRENMFT------TESEKRDYAIKPMNCPGHVQVFNHGLRSYRDLPLRY 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNE SG+LHGLMRVRGF QDDAH+FCT++Q  +E +  + L +S+YKDFGF+ 
Sbjct: 355 AEFGSCHRNESSGALHGLMRVRGFVQDDAHIFCTEDQFISESIAFNTLAMSVYKDFGFDN 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + +KLS RP+ R G+D  WD AE  ++  L     + ++      L GEGAFYGPK EY 
Sbjct: 415 VEIKLSLRPDARAGTDETWDRAEQGLREALTACGVTWEE------LPGEGAFYGPKVEYH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           ++DA+GR WQCGT+Q+D  LP R  A YV   + +  P+M+HRA+ GS+ERF+GI+IE+ 
Sbjct: 469 IRDALGRSWQCGTLQLDMVLPERLGAEYVAEDNSRRRPIMLHRAIVGSMERFLGILIEHH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G +P WL+P+Q +V  I  S  EYAQ +A  L+   + +E D RNE I+YKIREH+++K
Sbjct: 529 AGAMPAWLAPMQVVVMNIAESQTEYAQSLAQSLQKQGVRVEADLRNEKISYKIREHTLEK 588

Query: 603 IPIIIICGDKEASERSIGIRRFGST 627
           +P +++ GDKE   +++ +R  G  
Sbjct: 589 VPYLLVVGDKEREAQTVAVRARGGV 613


>gi|288576250|ref|ZP_05978464.2| threonine--tRNA ligase [Neisseria mucosa ATCC 25996]
 gi|288565905|gb|EFC87465.1| threonine--tRNA ligase [Neisseria mucosa ATCC 25996]
          Length = 643

 Score =  672 bits (1733), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 304/621 (48%), Positives = 438/621 (70%), Gaps = 15/621 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           + +T PDGS++ +    T + +A SI   LAK  VA  +NGK+ D  DP+ E S ++IIT
Sbjct: 8   LNITLPDGSVRQYESPVTVAQIAASIGAGLAKATVAGKVNGKLVDACDPITEDSAVQIIT 67

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A IE
Sbjct: 68  PKDQEGVEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAIE 127

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M+E+IA+D   +K      +  ++F+ + E YK+ +++ +P  E + +Y   E+ D+C
Sbjct: 128 ARMKELIAQDYDVIKIMTPRAETIKIFQDRGEEYKLRLIDDMPEVEAMGMYHHQEYVDMC 187

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T++EL  Y+  +EE+EK
Sbjct: 188 RGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKEELKAYIQRIEEAEK 246

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ ++  G++FWH KGW ++QT+  +MR+++    Y+E+ TPQ++D+
Sbjct: 247 RDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQTIEQHMRKELNAAGYKEVKTPQIMDK 306

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             W++SGHWD+Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+RL
Sbjct: 307 TFWEKSGHWDNYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRL 360

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF  
Sbjct: 361 AEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFHD 420

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + VKLS RPEKR GSD +WD AE   +G+ D +       +    L GEGAFYGPK EY 
Sbjct: 421 VSVKLSLRPEKRAGSDDVWDKAE---QGLRDALTACG---VEWDELPGEGAFYGPKIEYH 474

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+GR WQCGT+Q+DF LP R +A YV  ++++  PVM+HRA+ GS+ERFIGI+IEN 
Sbjct: 475 VKDALGRSWQCGTLQLDFVLPERLDAEYVTENNDRARPVMLHRAILGSLERFIGILIENH 534

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G+ PLWL+P+Q ++  IT +  +Y  E+A  L++    +E D RNE I YKIR++S  +
Sbjct: 535 AGSFPLWLAPVQMVIMNITENQADYCCEVAAKLQAAGFRVELDLRNEKIGYKIRDNSQYR 594

Query: 603 IPIIIICGDKEASERSIGIRR 623
            P  I+ GDKE  E  + +RR
Sbjct: 595 FPYQIVVGDKEKQENKVAVRR 615


>gi|83748297|ref|ZP_00945322.1| Threonyl-tRNA synthetase [Ralstonia solanacearum UW551]
 gi|83725029|gb|EAP72182.1| Threonyl-tRNA synthetase [Ralstonia solanacearum UW551]
          Length = 635

 Score =  672 bits (1733), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 318/625 (50%), Positives = 431/625 (68%), Gaps = 15/625 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           I +T PDGS + FP   T ++VA+SI   LAK A+A  I+G + D S  + +   + I+T
Sbjct: 2   IAITLPDGSRREFPGPVTVAEVAQSIGAGLAKAALAGRIDGHLVDTSFKIEQSVDLAIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   L VIRHS AH++A AV+ + P+ QV IGP+IE+GFYYDF  ++PF+ ++L  IE
Sbjct: 62  DKDADGLDVIRHSTAHLLAYAVKELHPDAQVTIGPVIENGFYYDFAYKRPFTPEDLVAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           KKM E+  +D    ++  S  +A +LFE   E YK EI+ SIP  + + LYR+G + DLC
Sbjct: 122 KKMAELAKKDEKVTREVWSRNEAVKLFEGMGEKYKAEIIASIPEDQEIGLYREGSFVDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV STG++K  FKLMKVAGAYWRGDSN  ML RIYGTAW  +++   YL+ LEE+EK
Sbjct: 182 RGPHVPSTGKLK-VFKLMKVAGAYWRGDSNNEMLQRIYGTAWAKKEDQEAYLHMLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ E+  G++FWH KGW+I+Q +  YMR ++    Y E+ TPQV+D+
Sbjct: 241 RDHRKLGKQLDLFHLQEEAPGMVFWHPKGWQIWQAVEQYMRGRLAGAGYSEVRTPQVMDR 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW +Y+ NMF       T  + R +A+KPMNCPGHV +FNHGL+SYR+LP+RL
Sbjct: 301 TLWEHSGHWQNYKENMFV------TESEKREYAIKPMNCPGHVQIFNHGLRSYRDLPLRL 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFG+ +RNEPSG+LHGLMRVRGF QDDAH+FCT+ Q+  E    ++L  S+Y+DFGFE 
Sbjct: 355 AEFGACHRNEPSGALHGLMRVRGFVQDDAHIFCTEGQIMAEAKDFNDLAFSVYEDFGFEN 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + VKL+ RP+KR G+D +WD AE  ++  L       ++      L GEGAFYGPK EY 
Sbjct: 415 VAVKLALRPDKRAGTDEIWDHAEEGLRTALRACGVEWEE------LPGEGAFYGPKVEYH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDAIGR WQCGT+Q+D  LP R  A YV   + +  PVM+HRA+ GS ERF+GI++EN 
Sbjct: 469 IKDAIGRSWQCGTLQLDLVLPERLGAEYVAEDNSRKRPVMLHRAILGSFERFLGILLENH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G LPLWL+P Q +V +I  +  EYA+ +A  L+        D RNE I YKIREHS++K
Sbjct: 529 AGALPLWLAPEQVVVMSIADAHAEYAETVAQSLQKQGFRASADLRNEKITYKIREHSLQK 588

Query: 603 IPIIIICGDKEASERSIGIRRFGST 627
           +P +++ GDKE     + +R  G+ 
Sbjct: 589 VPYLVVVGDKERDGNQVAVRARGNV 613


>gi|268686074|ref|ZP_06152936.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
 gi|268626358|gb|EEZ58758.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
          Length = 637

 Score =  672 bits (1733), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 304/621 (48%), Positives = 437/621 (70%), Gaps = 15/621 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           + +T PD S++ +    T + +A SI   LAK AVA  +NGK+ D  DP+ E S ++IIT
Sbjct: 2   LNITLPDCSVRQYESPVTVAQIAASIGAGLAKAAVAGKVNGKLVDACDPIVEDSAVQIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A IE
Sbjct: 62  PKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M+E+IA+D   +K      +A ++F+ + E YK+ +++ +P  E + +Y   E+ D+C
Sbjct: 122 ARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLIDDMPEVEAMGIYHHQEYVDMC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+EK
Sbjct: 182 RGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKAYIQRIEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ ++  G++FWH KGW ++QT+  +MR+++    Y+E+ TPQ++D+
Sbjct: 241 RDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQTIEQHMRKELNAAGYKEVKTPQIMDK 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             W++SGHWD+Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+RL
Sbjct: 301 TFWEKSGHWDNYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRL 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF  
Sbjct: 355 AEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFHD 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + V+LS RPEKR GSD +WD AE  ++  L          +  G L GEGAFYGPK EY 
Sbjct: 415 VSVRLSLRPEKRAGSDDVWDKAEQGLREALTACG------VEWGELPGEGAFYGPKIEYH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+GR WQCGT+Q+DF LP R +A YV  ++++  PVM+HRA+ GS+ERFIGI+IEN 
Sbjct: 469 VKDALGRSWQCGTLQLDFVLPERLDAEYVTENNDRARPVMLHRAILGSLERFIGILIENH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G+ PLWL+P+Q ++  IT +  +Y +E+A  L++     E D RNE I YKIR++S  +
Sbjct: 529 AGSFPLWLAPVQMVIMNITENQADYCREVAAKLQAADFRAELDLRNEKIGYKIRDNSQYR 588

Query: 603 IPIIIICGDKEASERSIGIRR 623
            P  I+ GDKE  E  + +RR
Sbjct: 589 FPYQIVIGDKEKQENKVAVRR 609


>gi|298369384|ref|ZP_06980702.1| threonine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
 gi|298283387|gb|EFI24874.1| threonine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
          Length = 648

 Score =  672 bits (1733), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 302/621 (48%), Positives = 433/621 (69%), Gaps = 15/621 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           + +T PDGS++ +    T + +A SI   LAK  VA  +NGK+ D SDP+ ++ S++IIT
Sbjct: 13  LNITLPDGSVRQYEAPVTVAQIAASIGSGLAKATVAGKVNGKLVDASDPIGKDASVQIIT 72

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IEDGFYYD   ++PF+ D++A IE
Sbjct: 73  PKDKEGVEIIRHSCAHLIGHAVKQLYPNAKMVIGPVIEDGFYYDIATDKPFTPDDVAAIE 132

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M+E+I +D   +K      +  + F+ + E YK+ +++ +P  E + LY   E+ D+C
Sbjct: 133 ARMKELINQDYDVVKIMTPRAETIKTFQERGEEYKLRLIDDMPEVEEMGLYHHQEYVDMC 192

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+EK
Sbjct: 193 RGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKAYIQRIEEAEK 251

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ ++  G++FWH +GW ++QT+  +MR+++    Y E+ TPQ++D+
Sbjct: 252 RDHRKLGKQLDLFHLQDEAPGMVFWHPRGWALWQTIEQHMRKELDAAGYREVKTPQIMDK 311

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             W++SGHWD+Y+ NMF       T  + R +A+KPMNCPGHV +FN+ L+SYR+LP+RL
Sbjct: 312 AFWEKSGHWDNYKDNMFV------TQSEKREYAVKPMNCPGHVQIFNNSLRSYRDLPMRL 365

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E  + + L++ IYK FGF  
Sbjct: 366 AEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVDEARRFNELLVRIYKQFGFHD 425

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + VKLS RPEKR GSD +WD AE  ++  L       ++      L GEGAFYGPK EY 
Sbjct: 426 VAVKLSLRPEKRAGSDDIWDKAEQGLRDALTACGVEWEE------LPGEGAFYGPKIEYH 479

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDAIGR WQCGT+Q+DF LP R +A YV   + +  PVM+HRA+ GS+ERFIGI+IEN 
Sbjct: 480 VKDAIGRSWQCGTLQLDFVLPDRLDAEYVTESNGRARPVMLHRAILGSLERFIGILIENH 539

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G+ PLWL+P+Q +V  IT    +Y +++   L++ +  +E D RNE I YKIR++S  +
Sbjct: 540 AGSFPLWLAPVQMVVMNITEHQTDYCRQVVERLQAENFRVELDLRNEKIGYKIRDNSQYR 599

Query: 603 IPIIIICGDKEASERSIGIRR 623
            P  I+ GDKE  E  + +RR
Sbjct: 600 FPYQIVVGDKEKQENKVAVRR 620


>gi|134282011|ref|ZP_01768717.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 305]
 gi|134246540|gb|EBA46628.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 305]
          Length = 681

 Score =  671 bits (1732), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 312/647 (48%), Positives = 440/647 (68%), Gaps = 14/647 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I +T PDGS + F    +  +VA SI   LAK  VA  I+G++ D  D +  +  ++IIT
Sbjct: 14  ITVTLPDGSHRAFNHPVSVIEVARSIGPGLAKNTVAGKIDGRLVDACDVIDHDARLQIIT 73

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+D   L +IRHSCAH++  AV+ I+P  ++ IGP+I+DGF+YD   E+ F+ +++A IE
Sbjct: 74  PKDEEGLEIIRHSCAHLLGHAVKQIYPTAKMVIGPVIDDGFFYDIAYERAFTPEDVAAIE 133

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           ++M+E+IA D   +K+     KA E F S++E YK+ ++  +P  + V LY   E+ D+C
Sbjct: 134 QRMKELIALDYNVIKKMTPRAKAIEAFHSREENYKLRLIADMPDVQAVGLYHHQEYVDMC 193

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +T +  K F+L KV+GAYWRGD+    L RIYGTAW  +++L  Y+  +EE+EK
Sbjct: 194 RGPHVPNT-RFLKHFRLTKVSGAYWRGDAKNEQLQRIYGTAWADKKDLDAYIQRMEEAEK 252

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL RE+DLFH  ED  G +FWH +GW +FQ LI+YMRR+ +D  Y E+N+P V+D+
Sbjct: 253 RDHRKLGRELDLFHFQEDAPGAVFWHPRGWAVFQELIAYMRRRQQDAGYVEVNSPDVMDR 312

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW +YR +MF  +  D      R  ALKPMNCPG   ++ HGLKSYR+LP+R+
Sbjct: 313 SLWEISGHWQNYRDHMFTTETEDG-----RALALKPMNCPGSALLYRHGLKSYRDLPIRM 367

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG V+R EPSGSLHGL+RVR FTQDDAH++CT +QM  EC ++  L++ IY+ FGF++
Sbjct: 368 GEFGKVHRYEPSGSLHGLLRVRHFTQDDAHIYCTPQQMDAECREVVTLVLDIYRQFGFDE 427

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + +KLSTRPE R+G+DA WD  E  +   L+ +       +   +  GEGAFYGPK E++
Sbjct: 428 VRIKLSTRPENRMGTDATWDQLEGTLVQALEGMG------LQYHLKPGEGAFYGPKLEFV 481

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+DAIGRDWQCGT+QVD NLP RF   YV+   ++  PVM+HRA+FGS+ERF GI+IE+ 
Sbjct: 482 LRDAIGRDWQCGTLQVDMNLPERFGIEYVDEDGQRKRPVMLHRALFGSLERFTGILIEHH 541

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G LP+WL+P+QAIV +IT +   YAQ++A LL+   L  E D RNETI YKIRE ++++
Sbjct: 542 AGRLPVWLAPLQAIVLSITEAHGAYAQDVARLLRGAGLRAEADIRNETIGYKIREQTLQR 601

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPD 649
           IP +++ G KE    ++ IR         + L  A+  L +++  PD
Sbjct: 602 IPFLLVVGAKERDAGAVAIRTRNGDDLGVLPLTQAVARLLQDAQAPD 648


>gi|167907142|ref|ZP_02494347.1| threonyl-tRNA synthetase [Burkholderia pseudomallei NCTC 13177]
          Length = 670

 Score =  671 bits (1732), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 312/647 (48%), Positives = 440/647 (68%), Gaps = 14/647 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I +T PDGS + F    +  +VA SI   LAK  VA  I+G++ D  D +  +  ++IIT
Sbjct: 3   ITVTLPDGSHRAFNHPVSVIEVARSIGPGLAKNTVAGKIDGRLVDACDVIDHDARLQIIT 62

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+D   L +IRHSCAH++  AV+ I+P  ++ IGP+I+DGF+YD   E+ F+ +++A IE
Sbjct: 63  PKDEEGLEIIRHSCAHLLGHAVKQIYPTAKMVIGPVIDDGFFYDIAYERAFTPEDVAAIE 122

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           ++M+E+IA D   +K+     KA E F S++E YK+ ++  +P  + V LY   E+ D+C
Sbjct: 123 QRMKELIALDYNVIKKMTPRAKAIEAFHSREENYKLRLIADMPDVQAVGLYHHQEYVDMC 182

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +T +  K F+L KV+GAYWRGD+    L RIYGTAW  +++L  Y+  +EE+EK
Sbjct: 183 RGPHVPNT-RFLKHFRLTKVSGAYWRGDAKNEQLQRIYGTAWADKKDLDAYIQRMEEAEK 241

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL RE+DLFH  ED  G +FWH +GW +FQ LI+YMRR+ +D  Y E+N+P V+D+
Sbjct: 242 RDHRKLGRELDLFHFQEDAPGAVFWHPRGWAVFQELIAYMRRRQQDAGYVEVNSPDVMDR 301

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW +YR +MF  +  D      R  ALKPMNCPG   ++ HGLKSYR+LP+R+
Sbjct: 302 SLWEISGHWQNYRDHMFTTETEDG-----RALALKPMNCPGSALLYRHGLKSYRDLPIRM 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG V+R EPSGSLHGL+RVR FTQDDAH++CT +QM  EC ++  L++ IY+ FGF++
Sbjct: 357 GEFGKVHRYEPSGSLHGLLRVRHFTQDDAHIYCTPQQMDAECREVVTLVLDIYRQFGFDE 416

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + +KLSTRPE R+G+DA WD  E  +   L+ +       +   +  GEGAFYGPK E++
Sbjct: 417 VRIKLSTRPENRMGTDATWDQLEGTLVQALEGMG------LQYHLKPGEGAFYGPKLEFV 470

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+DAIGRDWQCGT+QVD NLP RF   YV+   ++  PVM+HRA+FGS+ERF GI+IE+ 
Sbjct: 471 LRDAIGRDWQCGTLQVDMNLPERFGIEYVDEDGQRKRPVMLHRALFGSLERFTGILIEHH 530

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G LP+WL+P+QAIV +IT +   YAQ++A LL+   L  E D RNETI YKIRE ++++
Sbjct: 531 AGRLPVWLAPLQAIVLSITEAHGAYAQDVARLLRGAGLRAEADIRNETIGYKIREQTLQR 590

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPD 649
           IP +++ G KE    ++ IR         + L  A+  L +++  PD
Sbjct: 591 IPFLLVVGAKERDAGAVAIRTRNGDDLGVLPLTQAVARLLQDAQAPD 637


>gi|59800743|ref|YP_207455.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090]
 gi|73919809|sp|Q5F9U4|SYT_NEIG1 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|59717638|gb|AAW89043.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090]
          Length = 637

 Score =  671 bits (1732), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 304/621 (48%), Positives = 437/621 (70%), Gaps = 15/621 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           + +T PD S++ +    T + +A SI   LAK AVA  +NGK+ D  DP+ E S ++IIT
Sbjct: 2   LNITLPDCSVRQYESPVTVAQIAASIGAGLAKAAVAGKVNGKLVDACDPIVEDSAVQIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A IE
Sbjct: 62  PKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M+E+IA+D   +K      +A ++F+ + E YK+ +++ +P  E + +Y   E+ D+C
Sbjct: 122 ARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLIDDMPEVEAMGIYHHQEYVDMC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+EK
Sbjct: 182 RGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKDYIQRIEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ ++  G++FWH KGW ++QT+  +MR+++    Y+E+ TPQ++D+
Sbjct: 241 RDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQTIEQHMRKELNAAGYKEVKTPQIMDK 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             W++SGHWD+Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+RL
Sbjct: 301 TFWEKSGHWDNYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRL 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF  
Sbjct: 355 AEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFHD 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + V+LS RPEKR GSD +WD AE  ++  L          +  G L GEGAFYGPK EY 
Sbjct: 415 VSVRLSLRPEKRAGSDDVWDKAEQGLREALTACG------VEWGELPGEGAFYGPKIEYH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+GR WQCGT+Q+DF LP R +A YV  ++++  PVM+HRA+ GS+ERFIGI+IEN 
Sbjct: 469 VKDALGRSWQCGTLQLDFVLPERLDAEYVTENNDRARPVMLHRAILGSLERFIGILIENH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G+ PLWL+P+Q ++  IT +  +Y +E+A  L++     E D RNE I YKIR++S  +
Sbjct: 529 AGSFPLWLAPVQMVIMNITENQADYCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQYR 588

Query: 603 IPIIIICGDKEASERSIGIRR 623
            P  I+ GDKE  E  + +RR
Sbjct: 589 FPYQIVIGDKEKQENKVAVRR 609


>gi|240122983|ref|ZP_04735939.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
          Length = 648

 Score =  671 bits (1732), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 303/621 (48%), Positives = 437/621 (70%), Gaps = 15/621 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           + +T PD S++ +    T + +A SI   LAK AVA  +NGK+ D  DP+ E S ++IIT
Sbjct: 13  LNITLPDCSVRQYESPVTVAQIAASIGAGLAKAAVAGKVNGKLVDACDPIVEDSAVQIIT 72

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A IE
Sbjct: 73  PKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAIE 132

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M+E+IA+D   +K      +A ++F+ + E YK+ +++ +P  E + +Y   E+ D+C
Sbjct: 133 ARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLIDDMPEVEAMGIYHHQEYVDMC 192

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+EK
Sbjct: 193 RGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKDYIQRIEEAEK 251

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ ++  G++FWH KGW ++QT+  +MR+++    Y+E+ TPQ++D+
Sbjct: 252 RDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQTIEQHMRKELNAAGYKEVKTPQIMDK 311

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             W++SGHWD+Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+RL
Sbjct: 312 TFWEKSGHWDNYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRL 365

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF  
Sbjct: 366 AEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFHD 425

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + V+LS RPEKR GSD +WD AE  ++  L          +  G L GEGAFYGPK EY 
Sbjct: 426 VSVRLSLRPEKRAGSDDVWDKAEQGLREALTACG------VEWGELPGEGAFYGPKIEYH 479

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+GR WQCGT+Q+DF LP R +A YV  ++++  PVM+HRA+ GS+ERF+GI+IEN 
Sbjct: 480 VKDALGRSWQCGTLQLDFVLPERLDAEYVTENNDRARPVMLHRAILGSLERFVGILIENH 539

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G+ PLWL+P+Q ++  IT +  +Y +E+A  L++     E D RNE I YKIR++S  +
Sbjct: 540 AGSFPLWLAPVQMVIMNITENQADYCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQYR 599

Query: 603 IPIIIICGDKEASERSIGIRR 623
            P  I+ GDKE  E  + +RR
Sbjct: 600 FPYQIVIGDKEKQENKVAVRR 620


>gi|293399557|ref|ZP_06643710.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae F62]
 gi|291610126|gb|EFF39248.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae F62]
          Length = 648

 Score =  671 bits (1732), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 304/621 (48%), Positives = 437/621 (70%), Gaps = 15/621 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           + +T PD S++ +    T + +A SI   LAK AVA  +NGK+ D  DP+ E S ++IIT
Sbjct: 13  LNITLPDCSVRQYESPVTVAQIAASIGAGLAKAAVAGKVNGKLVDACDPIVEDSAVQIIT 72

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A IE
Sbjct: 73  PKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAIE 132

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M+E+IA+D   +K      +A ++F+ + E YK+ ++E +P  E + +Y   E+ D+C
Sbjct: 133 ARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLIEDMPEVEAMGMYHHQEYVDMC 192

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+EK
Sbjct: 193 RGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKDYIQRIEEAEK 251

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ ++  G++FWH KGW +++T+  +MR+++    Y+E+ TPQ++D+
Sbjct: 252 RDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWRTIEQHMRKELNAAGYKEVKTPQIMDK 311

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             W++SGHWD+Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+RL
Sbjct: 312 TFWEKSGHWDNYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRL 365

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF  
Sbjct: 366 AEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFHD 425

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + V+LS RPEKR GSD +WD AE  ++  L          +  G L GEGAFYGPK EY 
Sbjct: 426 VSVRLSLRPEKRAGSDDVWDKAEQGLREALTACG------VEWGELPGEGAFYGPKIEYH 479

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+GR WQCGT+Q+DF LP R +A YV  ++++  PVM+HRA+ GS+ERFIGI+IEN 
Sbjct: 480 VKDALGRSWQCGTLQLDFVLPERLDAEYVTENNDRARPVMLHRAILGSLERFIGILIENH 539

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G+ PLWL+P+Q ++  IT +  +Y +E+A  L++     E D RNE I YKIR++S  +
Sbjct: 540 AGSFPLWLAPVQMVIMNITENQADYCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQYR 599

Query: 603 IPIIIICGDKEASERSIGIRR 623
            P  I+ GDKE  E  + +RR
Sbjct: 600 FPYQIVIGDKEKQENKVAVRR 620


>gi|268596339|ref|ZP_06130506.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|268550127|gb|EEZ45146.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
          Length = 638

 Score =  671 bits (1732), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 304/621 (48%), Positives = 437/621 (70%), Gaps = 15/621 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           + +T PD S++ +    T + +A SI   LAK AVA  +NGK+ D  DP+ E S ++IIT
Sbjct: 3   LNITLPDCSVRQYESPVTVAQIAASIGAGLAKAAVAGKVNGKLVDACDPIVEDSAVQIIT 62

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A IE
Sbjct: 63  PKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAIE 122

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M+E+IA+D   +K      +A ++F+ + E YK+ +++ +P  E + +Y   E+ D+C
Sbjct: 123 ARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLIDDMPEVEAMGIYHHQEYVDMC 182

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+EK
Sbjct: 183 RGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKDYIQRIEEAEK 241

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ ++  G++FWH KGW ++QT+  +MR+++    Y+E+ TPQ++D+
Sbjct: 242 RDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQTIEQHMRKELNAAGYKEVKTPQIMDK 301

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             W++SGHWD+Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+RL
Sbjct: 302 TFWEKSGHWDNYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRL 355

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF  
Sbjct: 356 AEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFHD 415

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + V+LS RPEKR GSD +WD AE  ++  L          +  G L GEGAFYGPK EY 
Sbjct: 416 VSVRLSLRPEKRAGSDDVWDKAEQGLREALTACG------VEWGELPGEGAFYGPKIEYR 469

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+GR WQCGT+Q+DF LP R +A YV  ++++  PVM+HRA+ GS+ERFIGI+IEN 
Sbjct: 470 VKDALGRSWQCGTLQLDFVLPERLDAEYVTENNDRARPVMLHRAILGSLERFIGILIENH 529

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G+ PLWL+P+Q ++  IT +  +Y +E+A  L++     E D RNE I YKIR++S  +
Sbjct: 530 AGSFPLWLAPVQMVIMNITENQADYCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQYR 589

Query: 603 IPIIIICGDKEASERSIGIRR 623
            P  I+ GDKE  E  + +RR
Sbjct: 590 FPYQIVIGDKEKQENKVAVRR 610


>gi|319778289|ref|YP_004129202.1| Threonyl-tRNA synthetase [Taylorella equigenitalis MCE9]
 gi|317108313|gb|ADU91059.1| Threonyl-tRNA synthetase [Taylorella equigenitalis MCE9]
          Length = 646

 Score =  671 bits (1732), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 316/647 (48%), Positives = 449/647 (69%), Gaps = 21/647 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAING-----KVCDLSDPV-REGS 58
           I++T PDGS +++    T   +A+SI+ SLAK A+A  +          D S  V  + S
Sbjct: 2   IQVTLPDGSSRSYETPQTVEQIAQSIAPSLAKAAIAATVKSDTGIETTVDTSYVVDSDVS 61

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           + IITP+D   L +IRHS AH++A AV+ ++P+ QV IGP+I +GFYYDF  ++PF+ ++
Sbjct: 62  LSIITPKDDVGLDIIRHSTAHLLAHAVKELFPDAQVTIGPVINNGFYYDFSYKRPFTPED 121

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L +IEK+M E++ +D   +++    ++A E F+ + E YK EI+ SIP  E ++LYRQG 
Sbjct: 122 LQKIEKRMSELVKQDIAVIREEWDRDEAIEFFKKEGELYKAEIISSIPQGEVISLYRQGS 181

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + DLCRGPHV STG++K  FKLMKVAGAYWRGDSN  ML R+YGTAW+++ +  +YL  L
Sbjct: 182 FVDLCRGPHVPSTGKLK-VFKLMKVAGAYWRGDSNNEMLQRVYGTAWSSKDDQVKYLTML 240

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTP 297
           EE+EKRDHRKL +E+DLFH  ++  G+IFWH KGW I+Q +  +MR+  +++ Y+EI  P
Sbjct: 241 EEAEKRDHRKLGKELDLFHFQDEAPGLIFWHPKGWTIWQQVEQFMRKVYVENGYQEIKAP 300

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           Q+LD  LW+++GHWD+Y+ NMF  +  +      R + LKPMNCPGHV ++N  L SYRE
Sbjct: 301 QILDLGLWKKTGHWDNYKENMFTTQSEN------REYGLKPMNCPGHVQIYNSTLHSYRE 354

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R  EFG  +RNEPSGSLHG+MRVRGFTQDD H+FCT++Q+  ECL    L+  +YK+
Sbjct: 355 LPIRYGEFGQCHRNEPSGSLHGMMRVRGFTQDDGHIFCTEDQLLAECLAFTALLQKVYKE 414

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF +++ K++TRPEKR+G+D +WD AE   K +++++K S        +  GEGAFYGP
Sbjct: 415 FGFTEVLYKIATRPEKRIGADEIWDKAE---KALMESLKQSG---CEFEISPGEGAFYGP 468

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K EY LKDAIGR WQCGTIQVDF++P+R  A YV++   +  PVM+HRA+ GS+ERFIG+
Sbjct: 469 KIEYTLKDAIGRHWQCGTIQVDFSMPARLGAEYVDADDTRKTPVMLHRAILGSLERFIGM 528

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IEN+ G +P WLSP   +V  I+ +  +YA E+   L +    ++ D RNE I  KIRE
Sbjct: 529 LIENYSGAMPPWLSPEHVVVCPISEAFNDYALEVQTKL-NQKFRVKVDLRNEKITKKIRE 587

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +S++KIP I++ G+KE S  S+ +R  G+     +++ D I  L  E
Sbjct: 588 NSMQKIPYILVVGEKERSSSSVAVRARGNIDLGVLTVDDFIARLQNE 634


>gi|187929057|ref|YP_001899544.1| threonyl-tRNA synthetase [Ralstonia pickettii 12J]
 gi|238691850|sp|B2UGJ8|SYT_RALPJ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|187725947|gb|ACD27112.1| threonyl-tRNA synthetase [Ralstonia pickettii 12J]
          Length = 635

 Score =  671 bits (1732), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 320/632 (50%), Positives = 433/632 (68%), Gaps = 15/632 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I +T PDGS + FP   T ++VA+SI   LAK A+A  ++G++ D S  +  +  + IIT
Sbjct: 2   IAITLPDGSRREFPGPVTVAEVAQSIGAGLAKAALAGRVDGQMVDTSYTIDHDAKLAIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   + VIRHS AH++A AV+ ++P+ QV IGP+IE+GFYYDF  ++PF+ D+L  IE
Sbjct: 62  DKDADGVDVIRHSTAHLLAYAVKELYPDAQVTIGPVIENGFYYDFAYKRPFTPDDLVAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           KKM E+  +D    ++ LS + A +LF+   E YK EI+ SIP  + + LYR+G + DLC
Sbjct: 122 KKMGELAKKDEKVTREVLSRDDAVKLFQGMGEKYKAEIIASIPEDQEIGLYREGNFVDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV STG++K  FKLMKVAGAYWRGD N  ML RIYGTAW  +++   YL+ LEE+EK
Sbjct: 182 RGPHVPSTGKLK-VFKLMKVAGAYWRGDHNNEMLQRIYGTAWAKREDQDAYLHMLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQ 302
           RDHRKL RE+DLFHI E   G +FWH KGW ++Q +  YMRR  +++ Y+E+  PQ+LD+
Sbjct: 241 RDHRKLGRELDLFHIDEYSPGTVFWHPKGWTLWQEIEQYMRRVYRENGYQEVKGPQILDK 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+++GHWD YR NMF       T  + R +ALKPMNCPGH+ ++  G+KSYR+LP+R 
Sbjct: 301 TLWEKTGHWDKYRENMFI------TESEKREYALKPMNCPGHILIYKQGIKSYRDLPLRF 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG+ +RNEPSG LHG+MRVRGFTQDD H+FCT++ +  E      L+  +YKDFGF +
Sbjct: 355 GEFGACHRNEPSGGLHGIMRVRGFTQDDGHIFCTEDMIQAEVTAFTTLLQKVYKDFGFTE 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+ KLSTRP+KR+G++  WD AE  +    + ++ S         L GEGAFYGPK EY+
Sbjct: 415 ILYKLSTRPDKRIGTEESWDRAEAALA---EGLRASG---CEFEYLPGEGAFYGPKIEYV 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LKDA+GR WQCGTIQVD NLP R +A +V     +  P+M+HRA+ GS+ERFIGI+IE +
Sbjct: 469 LKDALGRQWQCGTIQVDPNLPERLDAEFVGEDGARHRPIMLHRAIVGSLERFIGILIEQY 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G LP WLSP+Q +V +IT S  EYAQ +A  L+        D RNE I YKIREHS++K
Sbjct: 529 AGALPTWLSPVQVVVLSITDSHAEYAQSVAQSLQKQGFRAVVDLRNEKIGYKIREHSVQK 588

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           +P  ++ GDKE  E  + +R  G+     + L
Sbjct: 589 VPYQVVVGDKERDENQVAVRARGNVDLGSMPL 620


>gi|268681605|ref|ZP_06148467.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|268621889|gb|EEZ54289.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
          Length = 637

 Score =  671 bits (1731), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 303/621 (48%), Positives = 437/621 (70%), Gaps = 15/621 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           + +T PD S++ +    T + +A SI   LAK AVA  +NGK+ D  DP+ E S ++IIT
Sbjct: 2   LNITLPDCSVRQYESPVTVAQIAASIGAGLAKAAVAGKVNGKLVDACDPIVEDSAVQIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A IE
Sbjct: 62  PKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M+E+IA+D   +K      +A ++F+ + E YK+ +++ +P  E + +Y   E+ D+C
Sbjct: 122 ARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLIDDMPEVEAMGIYHHQEYVDMC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+EK
Sbjct: 182 RGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKDYIQRIEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ ++  G++FWH KGW ++QT+  +MR+++    Y+E+ TPQ++D+
Sbjct: 241 RDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQTIEQHMRKELNAAGYKEVKTPQIMDK 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             W++SGHWD+Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+RL
Sbjct: 301 TFWEKSGHWDNYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRL 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF  
Sbjct: 355 AEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFHD 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + V+LS RPEKR GSD +WD AE  ++  L          +  G L GEGAFYGPK EY 
Sbjct: 415 VSVRLSLRPEKRAGSDDVWDKAEQGLREALTACG------VEWGELPGEGAFYGPKIEYH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+GR WQCGT+Q+DF LP R +A YV  ++++  PVM+HRA+ GS+ERF+GI+IEN 
Sbjct: 469 VKDALGRSWQCGTLQLDFVLPERLDAEYVTENNDRARPVMLHRAILGSLERFVGILIENH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G+ PLWL+P+Q ++  IT +  +Y +E+A  L++     E D RNE I YKIR++S  +
Sbjct: 529 AGSFPLWLAPVQMVIMNITENQADYCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQYR 588

Query: 603 IPIIIICGDKEASERSIGIRR 623
            P  I+ GDKE  E  + +RR
Sbjct: 589 FPYQIVIGDKEKQENKVAVRR 609


>gi|91784428|ref|YP_559634.1| threonyl-tRNA synthetase [Burkholderia xenovorans LB400]
 gi|123358618|sp|Q13WF7|SYT_BURXL RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|91688382|gb|ABE31582.1| Ser-tRNA(Thr) hydrolase [Burkholderia xenovorans LB400]
          Length = 635

 Score =  671 bits (1731), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 306/625 (48%), Positives = 436/625 (69%), Gaps = 15/625 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           + +  PDGS++ +    T ++VA SI   LAK A+   I+G++ D S  +  + ++ I+T
Sbjct: 2   VSIRLPDGSVRQYEHPVTVAEVAASIGPGLAKAALGGKIDGELVDTSALIDHDVALAIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   L +IRHS AH++A AV+ ++PE QV IGP+I++GFYYDF   +PF+ ++L +IE
Sbjct: 62  EKDADGLDIIRHSTAHLLAYAVKDLYPEAQVTIGPVIDNGFYYDFAYNRPFTPEDLEKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+MQE+  +D P  ++ +S ++A + F+S  E YK EI+ESIPA + + LY  G + DLC
Sbjct: 122 KRMQELAKKDEPVSRRVVSRDEAVDYFKSIGEKYKAEIIESIPATDEIKLYSHGGFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV STG++K  FKLMKVAGAYWRGDS    L RIYGTAW  +++   YL+ LEE+EK
Sbjct: 182 RGPHVPSTGKLK-VFKLMKVAGAYWRGDSKNEQLQRIYGTAWTKKEDQEAYLHMLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ ++  G++FWH +GW ++Q +  YMRR++ D  Y EI TP ++D+
Sbjct: 241 RDHRKLGKQLDLFHMQDESPGMVFWHPRGWTLWQQVEQYMRRRVNDAGYLEIKTPMIMDR 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW +YR NMF       T  + R +A+KPMNCPGHV VFNHGL+SYR+LP+R 
Sbjct: 301 SLWEASGHWQNYRENMFT------TESEKRDYAIKPMNCPGHVQVFNHGLRSYRDLPLRY 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNE SG+LHGLMRVRGF QDDAH+FCT++Q  +E +  + L +S+YKDFGF+ 
Sbjct: 355 AEFGSCHRNESSGALHGLMRVRGFVQDDAHIFCTEDQFISESIAFNTLAMSVYKDFGFDH 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + +KLS RP+ R G+D  WD AE  ++  L     + ++      L GEGAFYGPK EY 
Sbjct: 415 VEIKLSLRPDARAGTDETWDRAEQGLREALTACGVTWEE------LPGEGAFYGPKVEYH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+GR WQCGT+Q+D  LP R  A YV   + +  P+M+HRA+ GS+ERF+GI+IE+ 
Sbjct: 469 IKDALGRSWQCGTLQLDMVLPERLGAEYVAEDNSRRRPIMLHRAIVGSMERFLGILIEHH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G +P WL+P+Q +V  I  S  EYAQ +A  L+   + +  D RNE I+YKIREH+++K
Sbjct: 529 AGAMPAWLAPMQVVVMNIAESQTEYAQSLAQSLQKQGVRVAADLRNEKISYKIREHTLEK 588

Query: 603 IPIIIICGDKEASERSIGIRRFGST 627
           +P +++ GDKE   +++ +R  G  
Sbjct: 589 VPYLLVVGDKEREAQTVAVRARGGV 613


>gi|325137877|gb|EGC60452.1| threonyl-tRNA synthetase [Neisseria meningitidis ES14902]
          Length = 637

 Score =  671 bits (1731), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 302/621 (48%), Positives = 437/621 (70%), Gaps = 15/621 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           + +T PDGS++ +    T + +A SI   LA+ AVA  +NGK+ D  DP+ E S ++IIT
Sbjct: 2   LNITLPDGSVRQYESPVTVAQIAASIGVGLARAAVAGRVNGKLVDACDPIVENSAVQIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A IE
Sbjct: 62  PKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M+E+IA+D   +K      +A ++F+ + E YK+ +++ +P  E + +Y   E+ D+C
Sbjct: 122 ARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLIDDMPEVEAMGMYHHQEYVDMC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+EK
Sbjct: 182 RGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKAYIQRIEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ ++  G++FWH KGW ++Q +  +MR+++    Y+E+ TPQ++D+
Sbjct: 241 RDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDK 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             W++SGHWD+Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+RL
Sbjct: 301 TFWEKSGHWDNYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRL 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF  
Sbjct: 355 AEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFHD 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + VKLS RPE+R GSD +WD AE  ++  L       ++      L GEGAFYGPK EY 
Sbjct: 415 VAVKLSLRPEQRAGSDEVWDKAEQGLRDALTACGVEWEE------LPGEGAFYGPKIEYH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+GR WQCGT+Q+DF LP R +A YV  ++++  PVM+HRA+ GS+ERFIGI+IEN 
Sbjct: 469 VKDALGRSWQCGTLQLDFVLPERLDAEYVTENNDRARPVMLHRAILGSLERFIGILIENH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G+ PLWL+P+Q ++  IT +  +Y +E+A  L++     E D RNE I YKIR++S  +
Sbjct: 529 AGSFPLWLAPVQMVIMNITENQADYCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQYR 588

Query: 603 IPIIIICGDKEASERSIGIRR 623
            P  I+ GDKE  E  + +RR
Sbjct: 589 FPYQIVVGDKEKQENKVAVRR 609


>gi|241764278|ref|ZP_04762308.1| threonyl-tRNA synthetase [Acidovorax delafieldii 2AN]
 gi|241366347|gb|EER60877.1| threonyl-tRNA synthetase [Acidovorax delafieldii 2AN]
          Length = 639

 Score =  671 bits (1731), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 324/615 (52%), Positives = 428/615 (69%), Gaps = 19/615 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           I +T PDGS + FP   T ++VA SI   LAK A+A  I  KV D S  + + S + I+T
Sbjct: 2   IHITLPDGSQREFPGPVTVAEVAASIGAGLAKAALAGKIGDKVVDTSYQITQDSPLSIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   L VIRHS AH++A AV+ ++PE QV IGP+IE+GFYYDF  ++PF+ ++L  IE
Sbjct: 62  AKDADGLEVIRHSTAHLLAYAVKELFPEAQVTIGPVIENGFYYDFAYKRPFTPEDLVAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M E+ A+D P  ++ L  ++A   F+   E YK EI+ SIP+ E+V+LYR+G + DLC
Sbjct: 122 KRMAELAAKDEPIARRVLPRDEAVAYFKGLGENYKAEIIASIPSNEDVSLYREGRFEDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV STG++K FFKLMKVAGAYWRGD    ML R+YGTAW T+ EL QYL  LEE+EK
Sbjct: 182 RGPHVPSTGKLK-FFKLMKVAGAYWRGDHRNEMLQRVYGTAWATKDELQQYLTMLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQ 302
           RDHRKL RE+DLFHI +   GV+FWH KGW ++Q +  YMRR  +D+ Y E+  PQ+LD+
Sbjct: 241 RDHRKLGRELDLFHIDDHAPGVVFWHPKGWAVWQQVEQYMRRVYRDNGYLEVKGPQLLDK 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+++GHWD YR NMF       T  + R +ALKPMNCPGH+ +F  G+KSYR+LP+R 
Sbjct: 301 TLWEKTGHWDKYRDNMFT------TESEKRDYALKPMNCPGHILIFKQGIKSYRDLPLRY 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG  +RNEP+G LHG+MRVRGFTQDD H+FCT++ +  EC     L+  +YKDFGF  
Sbjct: 355 GEFGQCHRNEPTGGLHGIMRVRGFTQDDGHIFCTEDHILPECTAYTALLQKVYKDFGFSN 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+ K++TRPE R+GSD  WD AE+    ++++++ S        +  G+GAFYGPK EY 
Sbjct: 415 IIYKVATRPEARIGSDESWDKAEH---ALMESLRASG---CEFEIAPGDGAFYGPKIEYT 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LKDAIGR WQCGT+QVDF++P R +A YV     +  PVM+HRA+ GS+ERFIGI+IE  
Sbjct: 469 LKDAIGRQWQCGTMQVDFSMPERLDAEYVGEDGARHRPVMLHRAIVGSLERFIGILIEQH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIA----NLLKSHHLSIETDFRNETINYKIREH 598
            G LP WL+P+Q  V  IT +  +Y +EIA     LL    L +  D RNE I YKIREH
Sbjct: 529 SGALPTWLAPVQISVLNITDAQADYCREIAAKLQKLLPHQDLRVGLDLRNEKITYKIREH 588

Query: 599 SIKKIPIIIICGDKE 613
           S++K+P I++ GDKE
Sbjct: 589 SLQKLPYILVAGDKE 603


>gi|268594343|ref|ZP_06128510.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|268547732|gb|EEZ43150.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
          Length = 638

 Score =  671 bits (1731), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 303/621 (48%), Positives = 437/621 (70%), Gaps = 15/621 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           + +T PD S++ +    T + +A SI   LAK AVA  +NGK+ D  DP+ E S ++IIT
Sbjct: 3   LNITLPDCSVRQYESPVTVAQIAASIGAGLAKAAVAGKVNGKLVDACDPIVEDSAVQIIT 62

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A IE
Sbjct: 63  PKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAIE 122

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M+E+IA+D   +K      +A ++F+ + E YK+ ++E +P  E + +Y   E+ D+C
Sbjct: 123 ARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLIEDMPEVEAMGMYHHQEYVDMC 182

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+EK
Sbjct: 183 RGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKDYIQRIEEAEK 241

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ ++  G++FWH KGW +++T+  +MR+++    Y+E+ TPQ++D+
Sbjct: 242 RDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWRTIEQHMRKELNAAGYKEVKTPQIMDK 301

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             W++SGHWD+Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+RL
Sbjct: 302 TFWEKSGHWDNYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRL 355

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF  
Sbjct: 356 AEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFHD 415

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + V+LS RPEKR GSD +WD AE  ++  L          +  G L GEGAFYGPK EY 
Sbjct: 416 VSVRLSLRPEKRAGSDDVWDKAEQGLREALTACG------VEWGELPGEGAFYGPKIEYH 469

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+GR WQCGT+Q+DF LP R +A YV  ++++  PVM+HRA+ GS+ERF+GI+IEN 
Sbjct: 470 VKDALGRSWQCGTLQLDFVLPERLDAEYVTENNDRARPVMLHRAILGSLERFVGILIENH 529

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G+ PLWL+P+Q ++  IT +  +Y +E+A  L++     E D RNE I YKIR++S  +
Sbjct: 530 AGSFPLWLAPVQMVIMNITENQADYCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQYR 589

Query: 603 IPIIIICGDKEASERSIGIRR 623
            P  I+ GDKE  E  + +RR
Sbjct: 590 FPYQIVIGDKEKQENKVAVRR 610


>gi|241663242|ref|YP_002981602.1| threonyl-tRNA synthetase [Ralstonia pickettii 12D]
 gi|240865269|gb|ACS62930.1| threonyl-tRNA synthetase [Ralstonia pickettii 12D]
          Length = 635

 Score =  671 bits (1731), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 321/632 (50%), Positives = 433/632 (68%), Gaps = 15/632 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I +T PDGS + FP   T ++VA+SI   LAK A+A  ++G++ D S  + R+  + IIT
Sbjct: 2   IAITLPDGSRREFPGPVTVAEVAQSIGAGLAKAALAGRVDGQMVDTSFTIDRDAKLAIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   + VIRHS AH++A AV+ ++P+ QV IGP+IE+GFYYDF  ++PF+ ++L  IE
Sbjct: 62  DKDADGVDVIRHSTAHLLAYAVKELFPDAQVTIGPVIENGFYYDFAYKRPFTPEDLVAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           KKM E+  +D    ++ LS ++A +LFE   E YK EI+ SIP  + + LYR+G + DLC
Sbjct: 122 KKMTELAKKDEKVTREVLSRDEAVKLFEGMGEKYKAEIIASIPEDQEIGLYREGNFVDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV STG++K  FKLMKVAGAYWRGD N  ML RIYGTAW  +++   YL+ LEE+EK
Sbjct: 182 RGPHVPSTGKLK-VFKLMKVAGAYWRGDHNNEMLQRIYGTAWAKKEDQEAYLHMLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQ 302
           RDHRKL RE+DLFHI E   G +FWH KGW ++Q +  YMRR  +++ Y+E+  PQ+LD+
Sbjct: 241 RDHRKLGRELDLFHIDEYSPGTVFWHPKGWTLWQEIEQYMRRVYRENGYQEVKGPQILDK 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+++GHWD YR NMF       T  + R +ALKPMNCPGH+ ++  G+KSYR+LP+R 
Sbjct: 301 TLWEKTGHWDKYRENMFI------TESEKREYALKPMNCPGHILIYKQGIKSYRDLPLRF 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG+ +RNEPSG LHG+MRVRGFTQDD H+FCT++ +  E      L+  +YKDFGF +
Sbjct: 355 GEFGACHRNEPSGGLHGIMRVRGFTQDDGHIFCTEDMIQAEVTAFTTLLQKVYKDFGFTE 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+ KLSTRP+KR+G++  WD AE  +    + ++ S         L GEGAFYGPK EY+
Sbjct: 415 ILYKLSTRPDKRIGTEESWDRAEAALA---EGLRASG---CEFEYLPGEGAFYGPKIEYV 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LKDA+GR WQCGTIQVD NLP R +A +V     +  P+M+HRA+ GS+ERFIGI+IE +
Sbjct: 469 LKDALGRQWQCGTIQVDPNLPERLDAEFVGEDGARHRPIMLHRAIVGSLERFIGILIEQY 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G LP WLSP+Q  V +IT S  EYAQ +   L+        D RNE I YKIREHS++K
Sbjct: 529 AGALPTWLSPVQVAVLSITDSHAEYAQSVVQSLQKQGFRAVVDLRNEKIGYKIREHSVQK 588

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           +P  I+ GDKE  E  + +R  G+     + L
Sbjct: 589 VPYQIVVGDKERDENQVAVRARGNVDLGSMPL 620


>gi|254804601|ref|YP_003082822.1| Threonyl-tRNA synthetase [Neisseria meningitidis alpha14]
 gi|254668143|emb|CBA04768.1| Threonyl-tRNA synthetase [Neisseria meningitidis alpha14]
          Length = 637

 Score =  671 bits (1731), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 302/621 (48%), Positives = 437/621 (70%), Gaps = 15/621 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           + +T PDGS++ +    T + +A SI   LAK AVA  +NGK+ D  DP+ E  S++IIT
Sbjct: 2   LNITLPDGSVRQYESPVTVAQIAASIGAGLAKAAVAGRVNGKLVDACDPITEDSSVQIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A IE
Sbjct: 62  PKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M+E+IA+D   +K      +A ++F+ + E YK+ +++ +P  E + +Y   E+ D+C
Sbjct: 122 ARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLIDDMPKVEAMGMYHHQEYVDMC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+EK
Sbjct: 182 RGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKAYIQRIEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ ++  G++FWH KGW ++Q +  +MR+++    Y+E+ TPQ++D+
Sbjct: 241 RDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDK 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             W++SGHW++Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+RL
Sbjct: 301 TFWEKSGHWENYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRL 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF  
Sbjct: 355 AEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFHD 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + VKLS RPE+R GSD +WD AE  ++  L       ++      L GEGAFYGPK EY 
Sbjct: 415 VAVKLSLRPEQRAGSDEVWDKAEQGLRDALTACGVEWEE------LPGEGAFYGPKIEYH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+GR WQCGT+Q+DF LP R +A YV  ++++  PVM+HRA+ GS+ERFIGI+IEN 
Sbjct: 469 VKDALGRSWQCGTLQLDFVLPERLDAEYVTENNDRARPVMLHRAILGSLERFIGILIENH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G+ PLWL+P+Q ++  IT +  +Y +E+A  L++     E D RNE I YKIR++S  +
Sbjct: 529 AGSFPLWLAPVQLVIMNITENQADYCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQYR 588

Query: 603 IPIIIICGDKEASERSIGIRR 623
            P  I+ GDKE  E  + +RR
Sbjct: 589 FPYQIVVGDKEKQENKVAVRR 609


>gi|268683833|ref|ZP_06150695.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
 gi|268624117|gb|EEZ56517.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
          Length = 637

 Score =  671 bits (1731), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 303/621 (48%), Positives = 437/621 (70%), Gaps = 15/621 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           + +T PD S++ +    T + +A SI   LAK AVA  +NGK+ D  DP+ E S ++IIT
Sbjct: 2   LNITLPDCSVRQYESPVTVAQIAASIGAGLAKAAVAGKVNGKLVDACDPIVEDSAVQIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A IE
Sbjct: 62  PKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M+E+IA+D   +K      +A ++F+ + E YK+ ++E +P  E + +Y   E+ D+C
Sbjct: 122 ARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLIEDMPEVEAMGMYHHQEYVDMC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+EK
Sbjct: 182 RGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKDYIQRIEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ ++  G++FWH KGW +++T+  +MR+++    Y+E+ TPQ++D+
Sbjct: 241 RDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWRTIEQHMRKELNAAGYKEVKTPQIMDK 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             W++SGHWD+Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+RL
Sbjct: 301 TFWEKSGHWDNYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRL 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF  
Sbjct: 355 AEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFHD 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + V+LS RPEKR GSD +WD AE  ++  L          +  G L GEGAFYGPK EY 
Sbjct: 415 VSVRLSLRPEKRAGSDDVWDKAEQGLREALTACG------VEWGELPGEGAFYGPKIEYH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+GR WQCGT+Q+DF LP R +A YV  ++++  PVM+HRA+ GS+ERF+GI+IEN 
Sbjct: 469 VKDALGRSWQCGTLQLDFVLPERLDAEYVTENNDRARPVMLHRAILGSLERFVGILIENH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G+ PLWL+P+Q ++  IT +  +Y +E+A  L++     E D RNE I YKIR++S  +
Sbjct: 529 AGSFPLWLAPVQMVIMNITENQADYCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQYR 588

Query: 603 IPIIIICGDKEASERSIGIRR 623
            P  I+ GDKE  E  + +RR
Sbjct: 589 FPYQIVIGDKEKQENKVAVRR 609


>gi|239998484|ref|ZP_04718408.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|240125235|ref|ZP_04738121.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
 gi|317163762|gb|ADV07303.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 648

 Score =  671 bits (1730), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 303/621 (48%), Positives = 437/621 (70%), Gaps = 15/621 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           + +T PD S++ +    T + +A SI   LAK AVA  +NGK+ D  DP+ E S ++IIT
Sbjct: 13  LNITLPDCSVRQYESPVTVAQIAASIGAGLAKAAVAGKVNGKLVDACDPIVEDSAVQIIT 72

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A IE
Sbjct: 73  PKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAIE 132

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M+E+IA+D   +K      +A ++F+ + E YK+ ++E +P  E + +Y   E+ D+C
Sbjct: 133 ARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLIEDMPEVEAMGMYHHQEYVDMC 192

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+EK
Sbjct: 193 RGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKDYIQRIEEAEK 251

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ ++  G++FWH KGW +++T+  +MR+++    Y+E+ TPQ++D+
Sbjct: 252 RDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWRTIEQHMRKELNAAGYKEVKTPQIMDK 311

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             W++SGHWD+Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+RL
Sbjct: 312 TFWEKSGHWDNYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRL 365

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF  
Sbjct: 366 AEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFHD 425

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + V+LS RPEKR GSD +WD AE  ++  L          +  G L GEGAFYGPK EY 
Sbjct: 426 VSVRLSLRPEKRAGSDDVWDKAEQGLREALTACG------VEWGELPGEGAFYGPKIEYH 479

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+GR WQCGT+Q+DF LP R +A YV  ++++  PVM+HRA+ GS+ERF+GI+IEN 
Sbjct: 480 VKDALGRSWQCGTLQLDFVLPERLDAEYVTENNDRARPVMLHRAILGSLERFVGILIENH 539

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G+ PLWL+P+Q ++  IT +  +Y +E+A  L++     E D RNE I YKIR++S  +
Sbjct: 540 AGSFPLWLAPVQMVIMNITENQADYCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQYR 599

Query: 603 IPIIIICGDKEASERSIGIRR 623
            P  I+ GDKE  E  + +RR
Sbjct: 600 FPYQIVIGDKEKQENKVAVRR 620


>gi|152980466|ref|YP_001353177.1| threonyl-tRNA synthetase [Janthinobacterium sp. Marseille]
 gi|166223349|sp|A6SY30|SYT_JANMA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|151280543|gb|ABR88953.1| threonyl-tRNA synthetase [Janthinobacterium sp. Marseille]
          Length = 635

 Score =  671 bits (1730), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 311/625 (49%), Positives = 431/625 (68%), Gaps = 15/625 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I +  PDGS + F    T + VA +I   LAK A+A  +NG V D S  + ++  + IIT
Sbjct: 2   ITVRLPDGSQREFDTPVTVAQVAANIGTGLAKAALAGKVNGDVVDTSYLIEKDSDLAIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   + VIRHS AH++A AV+ ++P+ QV IGP+I++GFYYDF  ++PF+ ++L  IE
Sbjct: 62  DKDAEGIDVIRHSTAHLLAYAVKELFPDAQVTIGPVIDNGFYYDFSYKRPFTPEDLVAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           KKM E+  +D P  ++ +  ++A   F+S  EAYK EI+ESIPA + V+LY +G++ DLC
Sbjct: 122 KKMTELAKKDEPVTRKVMPRDEAVAYFKSIGEAYKAEIIESIPADQEVSLYTEGKFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV STG++K  FKLMK+AGAYWRGDS   ML RIYGTAW  ++E   YL+ LEE+EK
Sbjct: 182 RGPHVPSTGKLK-VFKLMKLAGAYWRGDSKNEMLQRIYGTAWAKKEEQEAYLHMLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++D FH  E+  G+IFWH KGW I+Q +  YMR+  +D DY+E+  PQ+LD+
Sbjct: 241 RDHRKLGKQLDFFHFQEEAPGLIFWHPKGWSIWQQVEQYMRKVYQDNDYQEVKAPQILDR 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+++GHWD+YR NMF  +  +      R++ALKPMNCPGHV ++N  ++SYR+LP+R 
Sbjct: 301 GLWEKTGHWDNYRENMFVTESEN------RSYALKPMNCPGHVQIYNSDMRSYRDLPLRY 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG  +RNEPSG+LHG+MRVRGFTQDD H+FCT+EQ+  E    H   +++Y  FGFE 
Sbjct: 355 GEFGQCHRNEPSGALHGMMRVRGFTQDDGHIFCTEEQIAEEVTAFHAQAMAVYAAFGFEN 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I VKL+ RP+ R+G++  WD AE  ++  L     S  +      L GEGAFYGPK EY 
Sbjct: 415 IDVKLALRPDSRIGTEESWDIAEESLRSALRACGVSWTE------LPGEGAFYGPKIEYH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LKD++GR WQ GT+Q+D ++P R  A YV   + +  P+M+HRA+ GS+ERFIGI+IE++
Sbjct: 469 LKDSLGRAWQVGTVQIDPSMPGRLGAEYVAVDNTRKTPIMLHRAIVGSLERFIGILIEHY 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G LPLWL+P+Q  V  I+ +  EYAQ +A  LK     +  D RNE I YKIREHS++K
Sbjct: 529 AGALPLWLAPVQIAVLNISDAQAEYAQAVAQNLKKQGFRVHLDLRNEKITYKIREHSVQK 588

Query: 603 IPIIIICGDKEASERSIGIRRFGST 627
           +P II+ GDKE    ++ +R  G+ 
Sbjct: 589 LPYIIVIGDKERDAGTVAVRARGNV 613


>gi|33592589|ref|NP_880233.1| threonyl-tRNA synthetase [Bordetella pertussis Tohama I]
 gi|33596580|ref|NP_884223.1| threonyl-tRNA synthetase [Bordetella parapertussis 12822]
 gi|33601133|ref|NP_888693.1| threonyl-tRNA synthetase [Bordetella bronchiseptica RB50]
 gi|81425212|sp|Q7VY64|SYT_BORPE RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|81427196|sp|Q7W912|SYT_BORPA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|81431262|sp|Q7WKF7|SYT_BORBR RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|33572235|emb|CAE41786.1| threonyl-tRNA synthetase [Bordetella pertussis Tohama I]
 gi|33573281|emb|CAE37262.1| threonyl-tRNA synthetase [Bordetella parapertussis]
 gi|33575568|emb|CAE32646.1| threonyl-tRNA synthetase [Bordetella bronchiseptica RB50]
 gi|332382006|gb|AEE66853.1| threonyl-tRNA synthetase [Bordetella pertussis CS]
          Length = 649

 Score =  671 bits (1730), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 317/647 (48%), Positives = 447/647 (69%), Gaps = 20/647 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVA--VAINGKVCDLSDPV----REGS 58
           +++T PDGS + +P   T ++VA+SI   LAK A+A  VA +G    L D       +  
Sbjct: 2   VQITLPDGSQRQYPGPVTVAEVAQSIGAGLAKAALAGRVAFDGAEPRLVDTSFRIDNDAQ 61

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           + I+T +D   L +IRHS AH++A AV+S++P+ QV IGP+I++GFYYDF  ++PF+ ++
Sbjct: 62  LAIVTAKDADGLDLIRHSTAHLLAYAVKSLFPDAQVTIGPVIDNGFYYDFSYKRPFTPED 121

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L  IEKKM E+  +D    ++  S ++A   F+   E YK EI+ SIP+ E ++LYR+G+
Sbjct: 122 LQAIEKKMAELARKDEVVTREEWSRDEAVAYFKGIGEVYKAEIIASIPSNETLSLYREGD 181

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + DLCRGPHV STG++K  FKLMKVAGAYWRGDS   ML RIYGTAW ++ +   YL+ L
Sbjct: 182 FIDLCRGPHVPSTGKLK-VFKLMKVAGAYWRGDSKNEMLQRIYGTAWASKDDQDAYLHML 240

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTP 297
           EE+E+RDHRK+ RE+DLFH  ++  G+IFWH KGW ++Q +  YMR+  +D+ Y+E+  P
Sbjct: 241 EEAERRDHRKIGRELDLFHFQDEAPGLIFWHPKGWALWQQVEQYMRKVYQDNGYQEVKAP 300

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           Q+LD  LW+++GHWD+YR NMF  +  +      R + LKPMNCPGHV +FN GL SYRE
Sbjct: 301 QILDLTLWKKTGHWDNYRENMFTTESEN------RVYGLKPMNCPGHVQIFNAGLHSYRE 354

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R  EFG  +RNEPSGSLHG+MRVRGFTQDD H+FCT++Q+ +EC     L+  +YKD
Sbjct: 355 LPLRYGEFGQCHRNEPSGSLHGMMRVRGFTQDDGHIFCTEDQLQDECAAFTALLQKVYKD 414

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF +++ K++TRPEKR+GSD +WD AE  +   +++++ +        +  GEGAFYGP
Sbjct: 415 FGFTEVLYKVATRPEKRIGSDEIWDKAETAL---MESLRRTG---CEFEISPGEGAFYGP 468

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K EY LKDAIGR WQCGTIQVDF++P R  A YV+ + ++  PVM+HRA+ GS+ERFIG+
Sbjct: 469 KVEYTLKDAIGRHWQCGTIQVDFSMPVRLGAEYVDQNDQRRPPVMLHRAILGSLERFIGM 528

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IEN  G +P WL+P+QA+V  I+  + EYA +I   LK     ++ D R E I  KIRE
Sbjct: 529 LIENHAGAMPPWLAPLQAVVCCISEHSAEYAAQITQSLKKQGFRVQADLRGEKITRKIRE 588

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           HS++KIP +++ GDKE    ++ +R  G      ++L D I  L ++
Sbjct: 589 HSLQKIPYLLVVGDKEMQNGTVAVRGLGGLDLGVIALDDFIARLAED 635


>gi|269214426|ref|ZP_05986526.2| threonine--tRNA ligase [Neisseria lactamica ATCC 23970]
 gi|269209844|gb|EEZ76299.1| threonine--tRNA ligase [Neisseria lactamica ATCC 23970]
          Length = 643

 Score =  671 bits (1730), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 302/621 (48%), Positives = 437/621 (70%), Gaps = 15/621 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           + +T PDGS++ +    T + +A S+   LAK AVA  +NGK+ D  DP+ E S ++IIT
Sbjct: 8   LNITLPDGSVRQYESPVTVAQIAASVGAGLAKAAVAGKVNGKLVDACDPITEDSTVQIIT 67

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A IE
Sbjct: 68  PKDREGVEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAIE 127

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M+E+IA+D   +K      +A ++F+ + E YK+ +++ +P  E + +Y   E+ D+C
Sbjct: 128 ARMKELIAQDYDVIKIMTPRAEAVKIFQDRGEEYKLRLIDDMPEVEAMGMYHHQEYVDMC 187

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+EK
Sbjct: 188 RGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKAYIRRIEEAEK 246

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ ++  G++FWH KGW ++Q +  +MR+++    Y+E+ TPQ++D+
Sbjct: 247 RDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQAVEQHMRKELNAAGYKEVKTPQIMDK 306

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             W++SGHW++Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+RL
Sbjct: 307 TFWEKSGHWENYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRL 360

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF  
Sbjct: 361 AEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFHD 420

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + VKLS RP KR GSD +WD AE  ++  L       ++      L GEGAFYGPK EY 
Sbjct: 421 VSVKLSLRPGKRAGSDEVWDKAEQGLREALTACGVEWEE------LPGEGAFYGPKIEYH 474

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+GR WQCGT+Q+DF LP R NA YV  ++++  PVM+HRA+ GS+ERFIGI+IEN 
Sbjct: 475 VKDALGRSWQCGTLQLDFVLPERLNAEYVTENNDRARPVMLHRAILGSLERFIGILIENH 534

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G+ PLWL+P+Q ++  IT +  +Y +E+A  L++    +E D RNE I YKIR++S  +
Sbjct: 535 AGSFPLWLAPVQMVIMNITENQADYCREVAARLQAAGFRVELDLRNEKIGYKIRDNSQYR 594

Query: 603 IPIIIICGDKEASERSIGIRR 623
            P  I+ GDKE  E  + +RR
Sbjct: 595 FPYQIVVGDKEKQENKVAVRR 615


>gi|319410089|emb|CBY90425.1| threonyl-tRNA synthetase (threonine-tRNA ligase; ThrRS) [Neisseria
           meningitidis WUE 2594]
          Length = 637

 Score =  671 bits (1730), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 302/621 (48%), Positives = 437/621 (70%), Gaps = 15/621 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           + +T PDGS++ +    T + +A SI   LAK AVA  +NGK+ D  DP+ E S ++IIT
Sbjct: 2   LNITLPDGSVRQYESPVTVAQIAASIGAGLAKAAVAGRVNGKLVDACDPIVEDSAVQIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A IE
Sbjct: 62  PKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M+E+IA+D   +K      +A ++F+ + E YK+ +++ +P  E + +Y   E+ D+C
Sbjct: 122 ARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLIDDMPEVEAMGMYHHQEYVDMC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+EK
Sbjct: 182 RGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKAYIQRIEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ ++  G++FWH KGW ++Q +  +MR+++    Y+E+ TPQ++D+
Sbjct: 241 RDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDK 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             W++SGHW++Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+RL
Sbjct: 301 TFWEKSGHWENYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRL 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF  
Sbjct: 355 AEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFHD 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + VKLS RPE+R GSD +WD AE  ++  L          +  G L GEGAFYGPK EY 
Sbjct: 415 VSVKLSLRPEQRAGSDDVWDKAEQGLREALTACG------VEWGELPGEGAFYGPKIEYH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           ++DA+GR WQCGT+Q+DF LP R +A YV  ++++  PVM+HRA+ GS+ERFIGI+IEN 
Sbjct: 469 VRDALGRSWQCGTLQLDFVLPERLDAEYVTENNDRARPVMLHRAILGSLERFIGILIENH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G+ PLWL+P+Q ++  IT +  +Y +E+A  L++     E D RNE I YKIR++S  +
Sbjct: 529 AGSFPLWLAPVQLVIMNITENQADYCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQYR 588

Query: 603 IPIIIICGDKEASERSIGIRR 623
            P  I+ GDKE  E  + +RR
Sbjct: 589 FPYQIVVGDKEKQENKVAVRR 609


>gi|121634517|ref|YP_974762.1| threonyl-tRNA synthetase [Neisseria meningitidis FAM18]
 gi|120866223|emb|CAM09963.1| putative threonyl-tRNA synthetase [Neisseria meningitidis FAM18]
 gi|325131827|gb|EGC54527.1| threonyl-tRNA synthetase [Neisseria meningitidis M6190]
          Length = 648

 Score =  671 bits (1730), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 302/621 (48%), Positives = 437/621 (70%), Gaps = 15/621 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           + +T PDGS++ +    T + +A SI   LA+ AVA  +NGK+ D  DP+ E S ++IIT
Sbjct: 13  LNITLPDGSVRQYESPVTVAQIAASIGVGLARAAVAGRVNGKLVDACDPIVENSAVQIIT 72

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A IE
Sbjct: 73  PKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAIE 132

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M+E+IA+D   +K      +A ++F+ + E YK+ +++ +P  E + +Y   E+ D+C
Sbjct: 133 ARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLIDDMPEVEAMGMYHHQEYVDMC 192

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+EK
Sbjct: 193 RGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKAYIQRIEEAEK 251

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ ++  G++FWH KGW ++Q +  +MR+++    Y+E+ TPQ++D+
Sbjct: 252 RDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDK 311

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             W++SGHWD+Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+RL
Sbjct: 312 TFWEKSGHWDNYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRL 365

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF  
Sbjct: 366 AEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFHD 425

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + VKLS RPE+R GSD +WD AE  ++  L       ++      L GEGAFYGPK EY 
Sbjct: 426 VAVKLSLRPEQRAGSDEVWDKAEQGLRDALTACGVEWEE------LPGEGAFYGPKIEYH 479

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+GR WQCGT+Q+DF LP R +A YV  ++++  PVM+HRA+ GS+ERFIGI+IEN 
Sbjct: 480 VKDALGRSWQCGTLQLDFVLPERLDAEYVTENNDRARPVMLHRAILGSLERFIGILIENH 539

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G+ PLWL+P+Q ++  IT +  +Y +E+A  L++     E D RNE I YKIR++S  +
Sbjct: 540 AGSFPLWLAPVQMVIMNITENQADYCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQYR 599

Query: 603 IPIIIICGDKEASERSIGIRR 623
            P  I+ GDKE  E  + +RR
Sbjct: 600 FPYQIVVGDKEKQENKVAVRR 620


>gi|309378779|emb|CBX22605.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 637

 Score =  670 bits (1729), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 302/621 (48%), Positives = 437/621 (70%), Gaps = 15/621 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           + +T PDGS++ +    T + +A S+   LAK AVA  +NGK+ D  DP+ E S ++IIT
Sbjct: 2   LNITLPDGSVRQYESPVTVAQIAASVGAGLAKAAVAGKVNGKLVDACDPITEDSTVQIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A IE
Sbjct: 62  PKDREGVEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M+E+IA+D   +K      +A ++F+ + E YK+ +++ +P  E + +Y   E+ D+C
Sbjct: 122 ARMKELIAQDYDVIKIMTPRAEAVKIFQDRGEEYKLRLIDDMPEVEAMGMYHHQEYVDMC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+EK
Sbjct: 182 RGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKAYIRRIEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ ++  G++FWH KGW ++Q +  +MR+++    Y+E+ TPQ++D+
Sbjct: 241 RDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQAVEQHMRKELNAAGYKEVKTPQIMDK 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             W++SGHW++Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+RL
Sbjct: 301 TFWEKSGHWENYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRL 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF  
Sbjct: 355 AEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARVFNELLVRIYKQFGFHD 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + VKLS RP KR GSD +WD AE  ++  L       ++      L GEGAFYGPK EY 
Sbjct: 415 VSVKLSLRPGKRAGSDEVWDKAEQGLREALTACGVEWEE------LPGEGAFYGPKIEYH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+GR WQCGT+Q+DF LP R NA YV  ++++  PVM+HRA+ GS+ERFIGI+IEN 
Sbjct: 469 VKDALGRSWQCGTLQLDFVLPERLNAEYVTENNDRARPVMLHRAILGSLERFIGILIENH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G+ PLWL+P+Q ++  IT +  +Y +E+A  L++    +E D RNE I YKIR++S  +
Sbjct: 529 AGSFPLWLAPVQMVIMNITENQADYCREVAARLQAAGFRVELDLRNEKIGYKIRDNSQYR 588

Query: 603 IPIIIICGDKEASERSIGIRR 623
            P  I+ GDKE  E  + +RR
Sbjct: 589 FPYQIVVGDKEKQENKVAVRR 609


>gi|294670480|ref|ZP_06735360.1| hypothetical protein NEIELOOT_02198 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291307759|gb|EFE49002.1| hypothetical protein NEIELOOT_02198 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 637

 Score =  670 bits (1729), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 303/621 (48%), Positives = 435/621 (70%), Gaps = 15/621 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           + +T PDGS++ +    T + +A SI   LAK  VA  +NGK+ D  DP+ E S ++IIT
Sbjct: 2   LNITLPDGSVRQYESPVTVAQIAASIGAGLAKATVAGKVNGKLVDACDPITEDSTVQIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A IE
Sbjct: 62  PKDQEGVEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M+E+IA+D   +K      +  ++F+ + E YK+ ++E +P  E + +Y   E+ D+C
Sbjct: 122 ARMKELIAQDYDVIKIMTPRAETIKIFQDRGEEYKLRLIEDMPEVEAMGMYYHQEYVDMC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+EK
Sbjct: 182 RGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKAYIQRIEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ ++  G++FWH KGW ++QT+  +MR+++    Y+E+ TPQ++D+
Sbjct: 241 RDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQTIEQHMRKELNAAGYKEVKTPQIMDK 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             W++SGHWD+Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+RL
Sbjct: 301 TFWEKSGHWDNYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRL 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF  
Sbjct: 355 AEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFHD 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + VKLS RPEKR GS+ +WD AE  ++  L          +    L GEGAFYGPK EY 
Sbjct: 415 VSVKLSLRPEKRAGSNDVWDKAEQGLREALTACG------VEWDELPGEGAFYGPKIEYH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+GR WQCGT+Q+DF LP R +A YV  ++++  PVM+HRA+ GS+ERFIGI+IEN 
Sbjct: 469 VKDALGRSWQCGTLQLDFVLPERLDAEYVTENNDRARPVMLHRAILGSLERFIGILIENH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G+ PLWL+P Q ++  IT +  +Y +E+A  L++    +E D RNE I YKIR++S  +
Sbjct: 529 AGSFPLWLAPAQMVIMNITENQADYCREVAAKLQAAGFRVELDLRNEKIGYKIRDNSQYR 588

Query: 603 IPIIIICGDKEASERSIGIRR 623
            P  I+ GDKE  E  + +RR
Sbjct: 589 FPYQIVVGDKEKQENKVAVRR 609


>gi|325133766|gb|EGC56422.1| threonyl-tRNA synthetase [Neisseria meningitidis M13399]
 gi|325144077|gb|EGC66385.1| threonyl-tRNA synthetase [Neisseria meningitidis M01-240013]
 gi|325206438|gb|ADZ01891.1| threonyl-tRNA synthetase [Neisseria meningitidis M04-240196]
          Length = 637

 Score =  670 bits (1729), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 303/621 (48%), Positives = 436/621 (70%), Gaps = 15/621 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           + +T PDGS++ +    T + +A SI   LA+ AVA  +NGK+ D  DP+ E S ++IIT
Sbjct: 2   LNITLPDGSVRQYESPVTVAQIAASIGVGLARAAVAGRVNGKLVDACDPIVEDSAVQIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+D   + +I HSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A IE
Sbjct: 62  PKDQEGIEIICHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M+E+IA+D   +K      +A ++F+ + E YK+ +++ +P  E + +Y   E+ D+C
Sbjct: 122 ARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLIDDMPEVEAMGMYHHQEYVDMC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+EK
Sbjct: 182 RGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKAYIQRIEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ ++  G++FWH KGW ++Q +  +MR+++    Y+E+ TPQ++D+
Sbjct: 241 RDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDK 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             W++SGHWD+Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+RL
Sbjct: 301 TFWEKSGHWDNYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRL 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF  
Sbjct: 355 AEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFHD 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + VKLS RPEKR GSD +WD AE  ++  L          +  G L GEGAFYGPK EY 
Sbjct: 415 VSVKLSLRPEKRAGSDDVWDKAEQGLREALTACG------VEWGELPGEGAFYGPKIEYH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           ++DA+GR WQCGT+Q+DF LP R NA YV  ++++  PVM+HRA+ GS+ERFIGI+IEN 
Sbjct: 469 VRDALGRSWQCGTLQLDFVLPERLNAEYVTENNDRARPVMLHRAILGSLERFIGILIENH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G+ PLWL+P+Q ++  IT +  +Y +E+A  L++     E D RNE I YKIR++S  +
Sbjct: 529 AGSFPLWLAPVQMVIMNITENQADYCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQYR 588

Query: 603 IPIIIICGDKEASERSIGIRR 623
            P  I+ GDKE  E  + +RR
Sbjct: 589 FPYQIVVGDKEKQENKVAVRR 609


>gi|325982725|ref|YP_004295127.1| threonyl-tRNA synthetase [Nitrosomonas sp. AL212]
 gi|325532244|gb|ADZ26965.1| threonyl-tRNA synthetase [Nitrosomonas sp. AL212]
          Length = 635

 Score =  670 bits (1729), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 320/627 (51%), Positives = 440/627 (70%), Gaps = 16/627 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPE 65
           +  PDGS + F    +  +VA +I   L + A+A  ING++ DLS  V + S + IIT +
Sbjct: 4   VRLPDGSERIFEHPVSVMEVAMAIGSGLGRAAIAGKINGQLVDLSYLVEDDSDLAIITEK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++A AV+ ++PE QV IGP+I+DGFYYDF  ++ F+ ++L  IEK+
Sbjct: 64  DDEGLEIIRHSCAHLLAHAVKELFPEAQVTIGPVIDDGFYYDFSYKRSFTFEDLTAIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M EI  RD    ++ L   KA + F+ + E YK +I+ESIP  E+++LY QG++ DLCRG
Sbjct: 124 MIEISKRDLKIDRKILERAKAIDFFKKQGEFYKAQIIESIPGDEDLSLYSQGDFTDLCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +T ++K  FKLMKVAGAYWRGDSN  ML RIYGTAW ++ +   YL+ LEE+EKRD
Sbjct: 184 PHVPATSKIK-VFKLMKVAGAYWRGDSNNEMLQRIYGTAWASKDDQKNYLHRLEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHL 304
           HRK+ ++++LFH+ ++ SG++FWH KGW ++Q +  YMR  +  + Y EI TPQ+LD+ L
Sbjct: 243 HRKIGKQLNLFHMQDEASGMVFWHPKGWTLWQQIEQYMRNILSHNGYHEIRTPQILDKDL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W +SGHW+++R NMF       T  D R FA+KPMNCPGHV +FN GL+SYRELP+R AE
Sbjct: 303 WVRSGHWENFRENMFI------THSDERDFAIKPMNCPGHVQIFNQGLRSYRELPIRFAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNE SG+LHG+MRVR FTQDDAH+FCT++Q+  E ++  +L+  +Y DFGF +I+
Sbjct: 357 FGSCHRNEASGALHGIMRVRAFTQDDAHIFCTEDQIQQEVVEFIDLLKIVYADFGFREIL 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +KLSTRP KRVGS+A WD +E  ++  L+ +K   + +       GEGAFYGPK E+ LK
Sbjct: 417 IKLSTRPLKRVGSEAQWDKSEAALEAALNEVKLEWERQP------GEGAFYGPKIEFSLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D IGR WQCGT+Q+DF++P R  A YV   + +  PVM+HRA+ GS+ERFIGI+IEN+ G
Sbjct: 471 DCIGRLWQCGTLQLDFSMPDRLGAEYVAEDNSRQVPVMLHRAILGSLERFIGILIENYAG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
            LPLWLSP Q +V  I+ + ++YAQ++   LK + +    D RNE I YKIREHS++K+P
Sbjct: 531 ALPLWLSPEQVVVLNISRTQIDYAQKVVAQLKENGVRASLDLRNEKITYKIREHSLQKLP 590

Query: 605 IIIICGDKEASERSIGIR-RFGSTTTQ 630
             II GD+E     I +R R G    Q
Sbjct: 591 YQIIVGDEEVRANKIAVRNRVGENLGQ 617


>gi|254674303|emb|CBA10087.1| Threonyl-tRNA synthetase [Neisseria meningitidis alpha275]
          Length = 637

 Score =  670 bits (1728), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 300/621 (48%), Positives = 437/621 (70%), Gaps = 15/621 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           + +T PDGS++ +    T + +A SI   LAK  VA  +NGK+ D  DP+ E  S++IIT
Sbjct: 2   LNITLPDGSVRQYESPVTVAQIAASIGAGLAKATVAGRVNGKLVDACDPITEDSSVQIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A IE
Sbjct: 62  PKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M+E+IA+D   +K      +A ++F+ + E YK+ +++ +   E + +Y   E+ D+C
Sbjct: 122 ARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLIDDMSEVEAMGMYHHQEYVDMC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+EK
Sbjct: 182 RGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKAYIQRIEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ ++  G++FWH KGW ++Q +  +MR+++    Y+E+ TPQ++D+
Sbjct: 241 RDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDK 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             W++SGHW++Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+RL
Sbjct: 301 TFWEKSGHWENYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRL 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF  
Sbjct: 355 AEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFHD 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + VKLS RPE+R GSD +WD AE  ++  L          +  G L GEGAFYGPK EY 
Sbjct: 415 VSVKLSLRPEQRAGSDDVWDKAEQGLREALTACG------VEWGELPGEGAFYGPKIEYH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           ++DA+GR WQCGT+Q+DF LP R +A YV  ++++  PVM+HRA+ GS+ERFIGI+IEN+
Sbjct: 469 VRDALGRSWQCGTLQLDFVLPERLDAEYVTENNDRARPVMLHRAILGSLERFIGILIENY 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G+ PLWL+P+Q ++  IT +  +Y +E+A  L++    +E D RNE I YKIR++S  +
Sbjct: 529 AGSFPLWLAPVQLVIMNITENQADYCREVAAKLQAAGFRVELDLRNEKIGYKIRDNSQYR 588

Query: 603 IPIIIICGDKEASERSIGIRR 623
            P  I+ GDKE  E  + +RR
Sbjct: 589 FPYQIVVGDKEKQENKVAVRR 609


>gi|307730402|ref|YP_003907626.1| threonyl-tRNA synthetase [Burkholderia sp. CCGE1003]
 gi|307584937|gb|ADN58335.1| threonyl-tRNA synthetase [Burkholderia sp. CCGE1003]
          Length = 635

 Score =  670 bits (1728), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 304/625 (48%), Positives = 437/625 (69%), Gaps = 15/625 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           + +  PDGS++ +    T ++VA SI   LAK A+   I+G++ D S  +  + ++ I+T
Sbjct: 2   VSIRLPDGSVRQYEHPVTVAEVAASIGPGLAKAALGGKIDGQLVDTSTLIDHDVALAIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   L +IRHS AH++A AV+ ++PE QV IGP+I++GFYYDF   +PF+ ++L +IE
Sbjct: 62  EKDADGLDIIRHSTAHLLAYAVKDLYPEAQVTIGPVIDNGFYYDFAYSRPFTPEDLEKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+MQE+  +D P  ++ +S ++A + F+S  E YK EI++SIPA + + LY  G + DLC
Sbjct: 122 KRMQELAKKDEPVSRRVVSRDEAVDYFKSIGEKYKAEIIQSIPATDEIKLYSHGGFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV STG++K  FKLMKVAGAYWRGDS    L RIYGTAW  +++   YL+ LEE+EK
Sbjct: 182 RGPHVPSTGKLK-VFKLMKVAGAYWRGDSKNEQLQRIYGTAWTKKEDQEAYLHMLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ ++  G++FWH +GW ++Q +  YMRR++ +  Y EI TP ++D+
Sbjct: 241 RDHRKLGKQLDLFHMQDESPGMVFWHPRGWTLWQQVEQYMRRRVNEAGYLEIKTPMIMDR 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW +YR NMF       T  + R +A+KPMNCPGHV VFNHGL+SYR+LP+R 
Sbjct: 301 SLWEASGHWQNYRENMFT------TESEKRDYAIKPMNCPGHVQVFNHGLRSYRDLPLRY 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNE SG+LHGLMRVRGF QDDAH+FCT+EQ  +E +  + L +S+YKDFGF+ 
Sbjct: 355 AEFGSCHRNESSGALHGLMRVRGFVQDDAHIFCTEEQFISESIAFNTLAMSVYKDFGFDN 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + +KLS RP+ R G+D  WD AE  ++  L     + ++      L GEGAFYGPK EY 
Sbjct: 415 VEIKLSLRPDARAGTDETWDRAEQGLREALTACGVTWEE------LPGEGAFYGPKVEYH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+GR WQCGT+Q+D  LP R  A YV   + +  P+M+HRA+ GS+ERF+GI+IE+ 
Sbjct: 469 IKDALGRSWQCGTLQLDMVLPERLGAEYVAEDNGRRRPIMLHRAIVGSMERFLGILIEHH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G +P WL+P+Q +V  I  +  EYAQ +A  L+   + +E D RNE I+YKIR+H+++K
Sbjct: 529 AGAMPAWLAPMQVVVMNIAENQAEYAQSLAQSLQKQGVRVEADLRNEKISYKIRQHTLEK 588

Query: 603 IPIIIICGDKEASERSIGIRRFGST 627
           +P +++ GDKE   +++ +R  G  
Sbjct: 589 VPYLLVVGDKEREAQTVAVRARGGV 613


>gi|268603124|ref|ZP_06137291.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
 gi|268587255|gb|EEZ51931.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
          Length = 637

 Score =  670 bits (1728), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 302/621 (48%), Positives = 436/621 (70%), Gaps = 15/621 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           + +T PD S++ +    T + +A SI   LAK AVA  +NGK+ D  DP+ E S ++IIT
Sbjct: 2   LNITLPDCSVRQYESPVTVAQIAASIGAGLAKAAVAGKVNGKLVDACDPIVEDSAVQIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A IE
Sbjct: 62  PKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M+E+IA+D   +K      +A ++F+ + E YK+ +++ +P  E + +Y   E+ D+C
Sbjct: 122 ARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLIDDMPEVEAMGMYHHQEYVDMC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+EK
Sbjct: 182 RGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKDYIQRIEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ ++  G++FWH KGW ++Q +  +MR+++    Y+E+ TPQ++D+
Sbjct: 241 RDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDK 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             W++SGHWD+Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+RL
Sbjct: 301 TFWEKSGHWDNYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRL 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF  
Sbjct: 355 AEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFHD 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + V+LS RPEKR GSD +WD AE  ++  L          +  G L GEGAFYGPK EY 
Sbjct: 415 VSVRLSLRPEKRAGSDDVWDKAEQGLREALTACG------VEWGELPGEGAFYGPKIEYH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+GR WQCGT+Q+DF LP R +A YV  ++++  PVM+HRA+ GS+ERF+GI+IEN 
Sbjct: 469 VKDALGRSWQCGTLQLDFVLPERLDAEYVTENNDRARPVMLHRAILGSLERFVGILIENH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G+ PLWL+P+Q ++  IT +  +Y +E+A  L++     E D RNE I YKIR++S  +
Sbjct: 529 AGSFPLWLAPVQMVIMNITENQADYCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQYR 588

Query: 603 IPIIIICGDKEASERSIGIRR 623
            P  I+ GDKE  E  + +RR
Sbjct: 589 FPYQIVIGDKEKQENKVAVRR 609


>gi|240117427|ref|ZP_04731489.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
          Length = 648

 Score =  670 bits (1728), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 302/621 (48%), Positives = 436/621 (70%), Gaps = 15/621 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           + +T PD S++ +    T + +A SI   LAK AVA  +NGK+ D  DP+ E S ++IIT
Sbjct: 13  LNITLPDCSVRQYESPVTVAQIAASIGAGLAKAAVAGKVNGKLVDACDPIVEDSAVQIIT 72

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A IE
Sbjct: 73  PKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAIE 132

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M+E+IA+D   +K      +A ++F+ + E YK+ +++ +P  E + +Y   E+ D+C
Sbjct: 133 ARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLIDDMPEVEAMGMYHHQEYVDMC 192

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+EK
Sbjct: 193 RGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKDYIQRIEEAEK 251

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ ++  G++FWH KGW ++Q +  +MR+++    Y+E+ TPQ++D+
Sbjct: 252 RDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDK 311

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             W++SGHWD+Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+RL
Sbjct: 312 TFWEKSGHWDNYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRL 365

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF  
Sbjct: 366 AEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFHD 425

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + V+LS RPEKR GSD +WD AE  ++  L          +  G L GEGAFYGPK EY 
Sbjct: 426 VSVRLSLRPEKRAGSDDVWDKAEQGLREALTACG------VEWGELPGEGAFYGPKIEYH 479

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+GR WQCGT+Q+DF LP R +A YV  ++++  PVM+HRA+ GS+ERF+GI+IEN 
Sbjct: 480 VKDALGRSWQCGTLQLDFVLPERLDAEYVTENNDRARPVMLHRAILGSLERFVGILIENH 539

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G+ PLWL+P+Q ++  IT +  +Y +E+A  L++     E D RNE I YKIR++S  +
Sbjct: 540 AGSFPLWLAPVQMVIMNITENQADYCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQYR 599

Query: 603 IPIIIICGDKEASERSIGIRR 623
            P  I+ GDKE  E  + +RR
Sbjct: 600 FPYQIVIGDKEKQENKVAVRR 620


>gi|149926877|ref|ZP_01915136.1| threonyl-tRNA synthetase [Limnobacter sp. MED105]
 gi|149824429|gb|EDM83647.1| threonyl-tRNA synthetase [Limnobacter sp. MED105]
          Length = 635

 Score =  669 bits (1727), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 317/640 (49%), Positives = 433/640 (67%), Gaps = 15/640 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +  PDGS + F    T + VA SI   LAK A+A  +NG + D S  +  + S+ I+T +
Sbjct: 4   IRLPDGSERVFDHPVTVAQVAASIGPGLAKAALAGTVNGTLVDTSYTIDNDSSLSIVTEK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHS AH++A AV+ ++P  QV IGP+IEDGFYYDF  E+PF+ ++L  IEKK
Sbjct: 64  DEEGLDMIRHSTAHLLAYAVKELFPTAQVTIGPVIEDGFYYDFSYERPFTPEDLEAIEKK 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M E+   D    ++    + A + F+ + E YK EI+ SIP+ EN++LYR+G++ DLCRG
Sbjct: 124 MAELAKLDEVVTREEWVRDDAVQFFKDQGEHYKAEIIASIPSNENISLYREGKFIDLCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +TG++K F KLMKVAGAYWRG+SN  ML RIYGTAW  +++L  YL+ LEE+EKRD
Sbjct: 184 PHVPNTGKLKHF-KLMKVAGAYWRGNSNNEMLQRIYGTAWTKKEDLAAYLHRLEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHL 304
           HRKL +++DLFH+ ++  G++FWH KGW ++Q +  YMR+   D  Y+EI  PQ+LD+ L
Sbjct: 243 HRKLGKQLDLFHMQDEAPGLVFWHPKGWALWQQVEQYMRKVYVDGGYQEIRCPQILDRKL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHWD+Y+ NMF       T  + R +ALKPMNCPGH+ VF   L+SYR+LP+R  E
Sbjct: 303 WEKSGHWDNYKENMFT------TESEKRDYALKPMNCPGHIEVFKSDLRSYRDLPMRYGE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FG+ +RNE SG+LHG+MRVRGFTQDD H+FCT++Q+  E  K + + + +Y DFGF +I 
Sbjct: 357 FGACHRNESSGALHGIMRVRGFTQDDGHIFCTEDQVQEEVTKFNQVAMQVYADFGFNEIN 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           VKL+ RPE R+G+D  WD AE+ ++  L          +    L GEGAFYGPK EY +K
Sbjct: 417 VKLALRPEARLGTDETWDKAEDSLRAALKACG------VQWTELPGEGAFYGPKIEYHMK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D+IGR WQCGTIQVDF LP R  A YV   + +  PVM+HRA+ GS+ERFIGI+IEN  G
Sbjct: 471 DSIGRSWQCGTIQVDFQLPGRLGAEYVAEDNSRRVPVMLHRAIVGSMERFIGILIENHAG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
            +P+WLSP+Q +V TIT +  EYA  +  +LK   + +E D RNE IN KIREH+++K P
Sbjct: 531 AMPVWLSPVQVVVATITEAHNEYAHNVVQMLKKQGIRVEADLRNEKINRKIREHTMQKTP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            I + GD E     + +R  G+     + + D I  L  E
Sbjct: 591 YIAVIGDAERDANQVAVRLRGNENLGSLPVDDFIQRLLGE 630


>gi|240115143|ref|ZP_04729205.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|291044371|ref|ZP_06570080.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
 gi|291011265|gb|EFE03261.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
          Length = 648

 Score =  669 bits (1727), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 302/621 (48%), Positives = 436/621 (70%), Gaps = 15/621 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           + +T PD S++ +    T + +A SI   LAK AVA  +NGK+ D  DP+ E S ++IIT
Sbjct: 13  LNITLPDCSVRQYESPVTVAQIAASIGAGLAKAAVAGKVNGKLVDACDPIVEDSAVQIIT 72

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A IE
Sbjct: 73  PKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAIE 132

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M+E+IA+D   +K      +A ++F+ + E YK+ +++ +P  E + +Y   E+ D+C
Sbjct: 133 ARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLIDDMPEVEAMGIYHHQEYVDMC 192

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+EK
Sbjct: 193 RGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKDYIQRIEEAEK 251

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ ++  G++FWH KGW ++Q +  +MR+++    Y+E+ TPQ++D+
Sbjct: 252 RDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDK 311

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             W++SGHWD+Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+RL
Sbjct: 312 TFWEKSGHWDNYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRL 365

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF  
Sbjct: 366 AEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFHD 425

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + V+LS RPEKR GSD +WD AE  ++  L          +  G L GEGAFYGPK EY 
Sbjct: 426 VSVRLSLRPEKRAGSDDVWDKAEQGLREALTACG------VEWGELPGEGAFYGPKIEYH 479

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+GR WQCGT+Q+DF LP R +A YV  ++++  PVM+HRA+ GS+ERF+GI+IEN 
Sbjct: 480 VKDALGRSWQCGTLQLDFVLPERLDAEYVTENNDRARPVMLHRAILGSLERFVGILIENH 539

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G+ PLWL+P+Q ++  IT +  +Y +E+A  L++     E D RNE I YKIR++S  +
Sbjct: 540 AGSFPLWLAPVQMVIMNITENQADYCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQYR 599

Query: 603 IPIIIICGDKEASERSIGIRR 623
            P  I+ GDKE  E  + +RR
Sbjct: 600 FPYQIVIGDKEKQENKVAVRR 620


>gi|260441039|ref|ZP_05794855.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
 gi|268600819|ref|ZP_06134986.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|268584950|gb|EEZ49626.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
          Length = 637

 Score =  669 bits (1727), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 302/621 (48%), Positives = 436/621 (70%), Gaps = 15/621 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           + +T PD S++ +    T + +A SI   LAK AVA  +NGK+ D  DP+ E S ++IIT
Sbjct: 2   LNITLPDCSVRQYESPVTVAQIAASIGAGLAKAAVAGKVNGKLVDACDPIVEDSAVQIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A IE
Sbjct: 62  PKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M+E+IA+D   +K      +A ++F+ + E YK+ +++ +P  E + +Y   E+ D+C
Sbjct: 122 ARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLIDDMPEVEAMGIYHHQEYVDMC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+EK
Sbjct: 182 RGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKDYIQRIEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ ++  G++FWH KGW ++Q +  +MR+++    Y+E+ TPQ++D+
Sbjct: 241 RDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDK 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             W++SGHWD+Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+RL
Sbjct: 301 TFWEKSGHWDNYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRL 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF  
Sbjct: 355 AEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFHD 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + V+LS RPEKR GSD +WD AE  ++  L          +  G L GEGAFYGPK EY 
Sbjct: 415 VSVRLSLRPEKRAGSDDVWDKAEQGLREALTACG------VEWGELPGEGAFYGPKIEYH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+GR WQCGT+Q+DF LP R +A YV  ++++  PVM+HRA+ GS+ERF+GI+IEN 
Sbjct: 469 VKDALGRSWQCGTLQLDFVLPERLDAEYVTENNDRARPVMLHRAILGSLERFVGILIENH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G+ PLWL+P+Q ++  IT +  +Y +E+A  L++     E D RNE I YKIR++S  +
Sbjct: 529 AGSFPLWLAPVQMVIMNITENQADYCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQYR 588

Query: 603 IPIIIICGDKEASERSIGIRR 623
            P  I+ GDKE  E  + +RR
Sbjct: 589 FPYQIVIGDKEKQENKVAVRR 609


>gi|121997230|ref|YP_001002017.1| threonyl-tRNA synthetase [Halorhodospira halophila SL1]
 gi|166223346|sp|A1WU53|SYT_HALHL RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|121588635|gb|ABM61215.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Halorhodospira
           halophila SL1]
          Length = 640

 Score =  669 bits (1726), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 311/646 (48%), Positives = 439/646 (67%), Gaps = 18/646 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP+   +T PDGS+K F    T  ++AESI R LAK A+   ++G++ DL  P+  +  +
Sbjct: 1   MPA---ITLPDGSVKAFDHPVTTREIAESIGRKLAKDAIVGRVDGELIDLDRPIEHDAYV 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EI+T  DP  L VIRHS AH+MA+AV+ + PE+QV IGP +++GFYYDF  E+  S DEL
Sbjct: 58  EIVTSNDPDGLEVIRHSTAHLMAQAVKQLHPEMQVTIGPTVDNGFYYDFAGERSLSEDEL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IE++M E+   D P  ++    E AR+ F  + E YK +I++ +P  E +T+YRQG++
Sbjct: 118 ETIEQRMSELAEADHPVEREVWDREAARQFFLEQGETYKAQIIDDLPESETITVYRQGDF 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV STG++K F KL KVAGAYWRGD N  ML R+YGTAW  +++L  YL  L 
Sbjct: 178 ADLCRGPHVPSTGKLKAF-KLTKVAGAYWRGDQNNEMLQRVYGTAWPDRKQLKAYLDRLA 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQ 298
           E+E+RDHR+L R  DLFH+ E+  G++FWH +GW+++  +  Y+RR ++D+ Y+EI+TP 
Sbjct: 237 EAERRDHRRLGRTQDLFHVQEESPGMVFWHPRGWRLYLEVQDYIRRLMRDNGYQEIHTPM 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D+ LW++SGHW  +  NMF       T  + R +A+KPMNCP HV VF  GLKSYR+L
Sbjct: 297 LVDRSLWERSGHWAMFAENMFV------TESESRDYAVKPMNCPCHVEVFKQGLKSYRDL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT+ Q+  E     +L+   Y+DF
Sbjct: 351 PLRLAEFGSCHRNEPSGTLHGLMRVRGFVQDDAHIFCTENQIQEEVRTFIDLVYRAYRDF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE +++ LSTRP++RVG DALWD AE+ +   L+T        ++  +  GEGAFYGPK
Sbjct: 411 GFEDVLIALSTRPDERVGDDALWDKAESALATALETHG------LDYTLQPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ L+D + R WQ GTIQVDF++P R  A +V+   E+  PVM+HRA+ GS+ERFIGI+
Sbjct: 465 IEFSLRDCLERVWQLGTIQVDFSMPGRLGAQFVDDDGERRTPVMLHRAILGSLERFIGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE++ G LP WL+P+QA+V  IT    +YA+ +   L       E D RNE I YKIREH
Sbjct: 525 IEHYGGALPTWLAPVQAVVLNITDRQADYARSVEQQLLESGFRAEADLRNEKIGYKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +++K+P +++ GD+E    ++ +R    T    + L + +  L+ +
Sbjct: 585 TLQKVPYMLVLGDRELESGTVAVRHRDGTDLGSMELEELVARLSND 630


>gi|291614198|ref|YP_003524355.1| threonyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1]
 gi|291584310|gb|ADE11968.1| threonyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1]
          Length = 637

 Score =  669 bits (1726), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 318/627 (50%), Positives = 443/627 (70%), Gaps = 16/627 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS +++P   T ++VA+SI   LA+ A+A  ++G + D S  +  +  + +IT +
Sbjct: 4   ITLPDGSQRSYPNPVTVAEVAQSIGAGLARAALAGKVDGVLVDTSHLISVDAKLAVITDK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   + +IRHS AH++A AV+ ++PE QV IGP+IE+GFYYDF   +PF+ ++L  IEK+
Sbjct: 64  DADGVDLIRHSTAHLLAYAVKDLFPEAQVTIGPVIENGFYYDFAYSRPFTPEDLTAIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M E+  +D P  ++ L  ++A   F+S  E YK EI+ESIPA ++V+LY +G++ DLCRG
Sbjct: 124 MAELAKKDLPVTRKVLPRDEAVAYFKSIGEKYKAEIIESIPADQDVSLYSEGDFTDLCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV STG++K F KLMKVAGAYWRGDS   ML RIYGTAW  +++L  YL  LEE+EKRD
Sbjct: 184 PHVPSTGKLKAF-KLMKVAGAYWRGDSKNEMLQRIYGTAWAKKEDLEAYLVRLEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHL 304
           HRKL +++DLFH+ ++  G++FWH KGW ++Q +  YMR   +D+ Y EI  PQ++D+ L
Sbjct: 243 HRKLGKQLDLFHMQDEAPGMVFWHPKGWAMWQVIEQYMRAVYRDNGYHEIRCPQIIDRVL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHW+ Y+ANMF       T  +   +A+KPMNCPGHV VFN  L+SYRELP+R  E
Sbjct: 303 WEKSGHWEHYKANMFT------TESEKHDYAIKPMNCPGHVQVFNADLRSYRELPLRYGE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNEPSG LHGLMRVRGF QDD H+FCT+EQ+ +E    + L++ +YKDFGF  ++
Sbjct: 357 FGSCHRNEPSGGLHGLMRVRGFVQDDGHIFCTEEQIESEVKAFNTLVLKVYKDFGFHDVV 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           VKL+ RPE RVGSD +WD +EN ++  L   + S  D      L GEGAFYGPK E+ +K
Sbjct: 417 VKLALRPEGRVGSDEIWDKSENALRAAL---RASGMDWEE---LPGEGAFYGPKIEFHIK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           DAIGR WQCGTIQVDF++P R  A +V+  + +  PVM+HRA+ GS+ERFIGI++EN  G
Sbjct: 471 DAIGRSWQCGTIQVDFSMPGRLGAEFVDEDNTRKVPVMLHRAILGSLERFIGILVENHAG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
            LPLWL+P+Q +V  I+ +  EYA ++A  L++    +++D RNE I YKIREHS++K+P
Sbjct: 531 ALPLWLAPVQMVVMNISQAQEEYAGKVAQTLRASGFRVQSDLRNEKITYKIREHSLQKLP 590

Query: 605 IIIICGDKEASERSIGIR-RFGSTTTQ 630
             +I GDKE +   + +R R G    Q
Sbjct: 591 YQLIIGDKEVAAGLVAVRSRTGEDLGQ 617


>gi|332284530|ref|YP_004416441.1| threonyl-tRNA synthetase [Pusillimonas sp. T7-7]
 gi|330428483|gb|AEC19817.1| threonyl-tRNA synthetase [Pusillimonas sp. T7-7]
          Length = 648

 Score =  669 bits (1725), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 320/647 (49%), Positives = 438/647 (67%), Gaps = 20/647 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAING-----KVCDLSDPVREGS- 58
           +++T PDGS + F      SDVA SI   L + A+A  I       K+ D S  + + + 
Sbjct: 2   VQITLPDGSQREFSGPVAVSDVAHSIGTGLGRAALAGRITTEDGQTKLVDTSFVIEQDTK 61

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           + IIT +D   L +IRHS AH++A AV+S++P+ QV IGP+I++GFYYDF  ++PF+ ++
Sbjct: 62  LAIITAKDADGLDLIRHSTAHLLAYAVKSLFPDAQVTIGPVIDNGFYYDFSYKRPFTPED 121

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L  IEKKM E+  +D    ++    + A E F+   E YK EI+ SIP+ E ++LYR+G+
Sbjct: 122 LEAIEKKMAELAKKDEVVTREEWLRDDAVEYFKGIGEHYKAEIIASIPSNEAISLYREGD 181

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + DLCRGPHV STG++K  FKLMKVAGAYWRGDSN  ML RIYGTAW +++E + YL  L
Sbjct: 182 FIDLCRGPHVPSTGKLK-VFKLMKVAGAYWRGDSNNEMLQRIYGTAWASKEEQSAYLTML 240

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTP 297
           EE+E+RDHRK+ RE+DLFH  ++  G+IFWH KGW ++Q +  YMR   +D+ Y+E+  P
Sbjct: 241 EEAERRDHRKIGRELDLFHFQDEAPGLIFWHPKGWTLWQQVEQYMRSVYRDNGYQEVKAP 300

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           Q+LD  LW+++GHWD+Y  NMF  +  +      R + LKPMNCPGHV +FN GL SYRE
Sbjct: 301 QILDLSLWKKTGHWDNYAENMFTTESEN------RVYGLKPMNCPGHVQIFNAGLHSYRE 354

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R  EFG  +RNEPSGSLHG+MRVRGFTQDD H+FCT++Q+ +EC     L+  +Y D
Sbjct: 355 LPIRYGEFGQCHRNEPSGSLHGMMRVRGFTQDDGHIFCTEDQLQDECADFTALLQKVYAD 414

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF +I+ K++TRPEKR+GSD +WD AE  +      +++ S+      V  GEGAFYGP
Sbjct: 415 FGFTEILYKVATRPEKRIGSDEVWDKAEQAL------MESLSRTGCEYEVSPGEGAFYGP 468

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K EY LKDAIGR WQCGTIQVDF++P R  A YV++  ++  PVM+HRA+ GS ERFIG+
Sbjct: 469 KIEYTLKDAIGRHWQCGTIQVDFSMPQRLGAEYVDATDQRRTPVMLHRAILGSFERFIGM 528

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IEN  G +P+WL+P  A+V  I+ S+ +YA E+A  LK       +D R E I  KIRE
Sbjct: 529 LIENHAGAMPVWLAPEHAVVCCISESSADYAAEVALGLKKQGFRAFSDLRGEKITRKIRE 588

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           HS++KIP I++ G+KE     + +R  G      +SL D    L +E
Sbjct: 589 HSMQKIPYILVVGEKERESGQVAVRGRGGVDLGVMSLNDFTVRLQQE 635


>gi|190571398|ref|YP_001975756.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|213018797|ref|ZP_03334605.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|238055114|sp|B3CMJ4|SYT_WOLPP RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|190357670|emb|CAQ55114.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|212995748|gb|EEB56388.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
          Length = 633

 Score =  668 bits (1724), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 317/642 (49%), Positives = 447/642 (69%), Gaps = 18/642 (2%)

Query: 5   IKLTF-PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEII 62
           IK+TF  +  +K +    TG D+ +       ++A+A  +NG++ DLS  +   + IE+I
Sbjct: 2   IKVTFLAEQKVKEYSGRVTGFDILQP---DALREAIAFKVNGELYDLSREIESDTEIEVI 58

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
              D   L +IRH  AHIMA+AV+ ++P  Q+ IGP I+DGFYYDF  ++ F++D+LA I
Sbjct: 59  QLSDEAGLDIIRHDAAHIMAQAVKELFPNTQITIGPTIQDGFYYDFATDRTFTTDDLAAI 118

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EKKM+EII  +  F+++  + ++A + F    E YKV+I+ SIP  EN+T+Y+QG + DL
Sbjct: 119 EKKMKEIIKSNHRFVREVWTRKQAIDFFSDIGERYKVDIVSSIPENENLTVYKQGNFVDL 178

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH  STG+VK F KLMKVAGAYWRGDS  PML RIYGTAW  + EL  YL  LEE+E
Sbjct: 179 CRGPHSPSTGRVKAF-KLMKVAGAYWRGDSKGPMLQRIYGTAWRNKDELNTYLKRLEEAE 237

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLD 301
           KRDHRK+A++MDLFHI E+  G IFWH +G+ ++  L SY+R+K+ ++ Y E+ TP ++ 
Sbjct: 238 KRDHRKIAKDMDLFHIQEEAVGQIFWHEQGYTLYNVLESYIRKKLMNNGYFEVKTPILVS 297

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW++SGHWD +R NMF +  ++      +  A+KPMNCP HV +FN  ++SYR+LP+R
Sbjct: 298 KELWEKSGHWDKFRENMFIIDESES-----KKLAIKPMNCPCHVQIFNSHIRSYRDLPIR 352

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AEFG+ +RNE SGSLHGLMRVRGFTQDDAH+FC ++Q+ +E +K  +L+  +Y + GF 
Sbjct: 353 MAEFGTCHRNESSGSLHGLMRVRGFTQDDAHIFCMEKQVNSETVKFCDLLKEVYSELGFN 412

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
           +I VK S RP+ R G+D +WD AE   + +L+ +K +    ++  +  GEGAFYGPK E+
Sbjct: 413 EISVKFSDRPDTRSGNDEVWDRAE---RALLEAVKEAG---LSYELNPGEGAFYGPKLEF 466

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
           ILKDAIGR+WQCGT+QVDF LP R  AFY+ +   K HPVM+HRA+ G+ ERFIGI+IEN
Sbjct: 467 ILKDAIGRNWQCGTLQVDFILPERLGAFYIGTDGHKHHPVMLHRAILGTFERFIGILIEN 526

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  P+WL+P Q  + TIT+ +  YA EI+N+LK   + I+TD  NE I+YKIR HS  
Sbjct: 527 YAGKFPVWLAPTQLAILTITNESDGYATEISNVLKEQGVRIKTDLTNEKISYKIRLHSSS 586

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           K+PI+ I G  E + +++ +R  GS   +  SL +A  +L K
Sbjct: 587 KVPILWIIGKNEVTNKTVSVRNLGSEKQESFSLENATELLLK 628


>gi|94499191|ref|ZP_01305729.1| threonyl-tRNA synthetase [Oceanobacter sp. RED65]
 gi|94428823|gb|EAT13795.1| threonyl-tRNA synthetase [Oceanobacter sp. RED65]
          Length = 638

 Score =  668 bits (1724), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 311/643 (48%), Positives = 440/643 (68%), Gaps = 17/643 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  DVA  I   LAK  +A  ++G++ D  D +  +  + IIT +
Sbjct: 4   ITLPDGSQRAFDEAVSVLDVANDIGPGLAKATIAGEVDGQLIDACDKIEHDAQLRIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L ++RHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D + P + +EL Q+EK+
Sbjct: 64  DEEGLEILRHSCAHLLGHAIKQLWPQTKMAIGPVIDNGFYYDVDADFPINEEELKQLEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+     P +K+ +S + AR+ FE + E+YK+EIL E+IP      LY   E+ D+CR
Sbjct: 124 MNELAKTSYPVVKEVVSWQTARDTFEKRGESYKMEILDENIPKDSTPALYHHEEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +  + FKLMKVAGAYWRGDS+  ML RIYGTAW  ++ L  YL  LEE+EKR
Sbjct: 184 GPHVPNM-KFCQNFKLMKVAGAYWRGDSDNKMLQRIYGTAWADKKALKAYLQRLEEAEKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRKL + +DLFH  E+  G++FWH KGW I+  L  YMR+K+ +  YEE+  P V+D  
Sbjct: 243 DHRKLGKALDLFHWQEEAPGMVFWHSKGWTIYNILEDYMRKKLVEYQYEEVRAPMVMDVS 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           +W++SGHWD Y+ N+FA      T  + RT+A+KPMNCPGH+ +FN GLKSYR+LP R+A
Sbjct: 303 MWEKSGHWDKYQDNIFA------TESEKRTYAVKPMNCPGHLQIFNQGLKSYRDLPYRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK- 422
           EFG V+RNEPSGSLHGLMRVR FTQDDAHVFCT+EQ+  E  K   ++  +YKDFGF++ 
Sbjct: 357 EFGIVHRNEPSGSLHGLMRVRSFTQDDAHVFCTEEQILEEVTKCIQMVFDVYKDFGFDQN 416

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + VKLSTRPEKR+GSD +WD AE   KG+ D +K    + ++  +  GEGAFYGPK E+ 
Sbjct: 417 LSVKLSTRPEKRIGSDEIWDKAE---KGLADALK---ANELDYEIQEGEGAFYGPKIEFT 470

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D + R WQCGTIQ+DF++P R  A YV+ + ++  PVMIHRA+ GS+ERFIGI+IE++
Sbjct: 471 LFDCLDRAWQCGTIQLDFSMPGRLGAQYVDENGDRQTPVMIHRAILGSLERFIGILIEHY 530

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G LP WL+P QA++  IT +  +Y +++   L      +++D RNE I +KIREH+++K
Sbjct: 531 AGALPTWLAPTQAMIMNITDNQADYVKKVQQTLAKQGFRVDSDLRNEKIGFKIREHTLQK 590

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           +P +++ GDKE +  ++ +R         +SL D   +L  E+
Sbjct: 591 VPYLLVTGDKEVASDAVAVRTRSGEDLGTMSLEDFAKLLESEN 633


>gi|256822932|ref|YP_003146895.1| threonyl-tRNA synthetase [Kangiella koreensis DSM 16069]
 gi|256796471|gb|ACV27127.1| threonyl-tRNA synthetase [Kangiella koreensis DSM 16069]
          Length = 639

 Score =  668 bits (1723), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 312/618 (50%), Positives = 429/618 (69%), Gaps = 15/618 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  DVA  I   LAK A+A  ++G + D S  +  + ++ IIT  
Sbjct: 4   ITLPDGSKREFDHAVSVYDVANDIGPGLAKAALAGKVDGHMVDTSFVIENDAALAIITER 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L VIRHS AH++A+AVQ ++  VQV IGP+I++GFYYDF  E+PFS D+L  IEK+
Sbjct: 64  DEDGLEVIRHSTAHLLAQAVQRLFDNVQVTIGPVIDNGFYYDFATEKPFSEDDLRAIEKE 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M++I   +    +  +  ++A   F +  E YK EI+ESIP  E ++LYRQG++ DLCRG
Sbjct: 124 MEKITKENLQVERTEMGRDEAVAFFRNMGEEYKAEIIESIPQNETLSLYRQGDFIDLCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV ST ++K F KLMKVAGAYWRGDSN  ML RIYGTAW  +++L  YL+ LEE+EKRD
Sbjct: 184 PHVPSTSKLKAF-KLMKVAGAYWRGDSNNAMLQRIYGTAWTNKKDLKAYLHRLEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHL 304
           HRK+A+ +DLFHI E+  G+IFWH KGW I++TL  Y+R ++K+ DY+E+ TPQ++D+ L
Sbjct: 243 HRKIAKALDLFHIQEEAPGMIFWHDKGWTIYKTLEQYIRERLKEHDYQEVKTPQMVDRSL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHWD +  +MF +K       D R +A+KPMNCP HV +FN GLKSYR+LP+R+AE
Sbjct: 303 WEKSGHWDKFGDDMFTLKS------DERDYAIKPMNCPCHVQIFNVGLKSYRDLPLRMAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNEPSG+LHG+MR+R F QDDAH+FCT++Q+  E  K   ++  +Y DFGF  ++
Sbjct: 357 FGSCHRNEPSGALHGIMRLRNFVQDDAHIFCTEDQIQEEVSKFIAMLYDVYADFGFTDVI 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           VKLSTRPE+RVG+D  WD AE     + D +K +S   I      GEGAFYGPK E+ LK
Sbjct: 417 VKLSTRPEQRVGTDQEWDKAE---AALADALKANS---IQFEYQPGEGAFYGPKLEFTLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D + R WQCGTIQVDF++P R +A YV    E+  PVM+HRA+ GS+ERFIGI+IE F G
Sbjct: 471 DCLERHWQCGTIQVDFSMPGRLDAEYVAESGERETPVMLHRAILGSLERFIGILIEEFAG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P WL+P QA+V  IT    ++ Q++   LK+    + +D RNE I +KIRE ++ ++P
Sbjct: 531 KFPAWLAPTQAVVMNITDKQADFCQKVVESLKNKGFRVNSDLRNEKIGFKIREQTLARVP 590

Query: 605 IIIICGDKEASERSIGIR 622
            +++ GD+E     + +R
Sbjct: 591 FLLVVGDREVENNHVAVR 608


>gi|88706032|ref|ZP_01103740.1| threonyl-tRNA synthetase [Congregibacter litoralis KT71]
 gi|88699746|gb|EAQ96857.1| threonyl-tRNA synthetase [Congregibacter litoralis KT71]
          Length = 645

 Score =  668 bits (1723), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 314/624 (50%), Positives = 432/624 (69%), Gaps = 18/624 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP+   +T PDGS + F    T  DVA  I   LAK A+A  +NG+  D S  +  + ++
Sbjct: 1   MPT---ITLPDGSQREFDHAVTVHDVAADIGPGLAKAALAGVVNGREVDTSFSIDADAAL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT  D   + +IRHS AH++A AVQ ++P  QV IGP+IEDGFYYDF  E  F+ ++L
Sbjct: 58  AIITERDEAGVEIIRHSTAHLLAMAVQDLFPGTQVTIGPVIEDGFYYDFAGEHQFTPEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IE +M EI++ D P  +  +  + A   FE   E+YKVEI+  +P  E ++LYRQGEW
Sbjct: 118 PKIEARMAEIVSADLPVERIVMDRDAAAAAFEKMGESYKVEIIRDLPEGEEISLYRQGEW 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV STG++  F KL K+AGAYWRGD+N  ML R+YGTAW  +++L QYL+ +E
Sbjct: 178 MDLCRGPHVPSTGKLGAF-KLTKLAGAYWRGDANNEMLQRVYGTAWANKKQLKQYLHRIE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+EKRDHRK+ +++DLFH  E+  G++FWH +GW I+Q +  YMR + + + Y+EI TPQ
Sbjct: 237 EAEKRDHRKIGKKLDLFHTQEEAPGMVFWHPQGWTIYQVIEQYMREQQRANGYQEIKTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D  LW++SGH D +  +MF ++       D R FA+KPMNCP HV VFN GL+SYR+L
Sbjct: 297 LVDMSLWEKSGHADKFGDDMFMLQA------DEREFAVKPMNCPCHVQVFNQGLRSYRDL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFGS +RNEPSGSLHG+MRVRGFTQDD H+FCT+EQ+ +E     + + ++Y+DF
Sbjct: 351 PLRLAEFGSCHRNEPSGSLHGIMRVRGFTQDDGHIFCTEEQIQSEVSTFIDFLHAVYRDF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF++++ +LSTRP KRVGSD  WD AE  +   LD  +   Q+      L GEGAFYGPK
Sbjct: 411 GFDEVIYRLSTRPPKRVGSDEDWDRAEKALADALDAQELDWQE------LPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD IGR WQ GT+QVDF++P R +A YV     +  PVM+HRA+ GS ERFIGI+
Sbjct: 465 IEFSLKDCIGRVWQMGTVQVDFSMPGRLDAQYVAEDGSRKTPVMLHRAILGSFERFIGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IENF+G  P+WL+P QA+V  IT    EY Q + + LK+    + +D RNE I +KIREH
Sbjct: 525 IENFEGAFPVWLAPKQAVVLNITEKQDEYVQFVEDSLKNKGFRVFSDLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIR 622
           +I++IP +++ G+KE   +++ +R
Sbjct: 585 TIQRIPYLLVVGEKEVEAKTVAVR 608


>gi|160871539|ref|ZP_02061671.1| threonyl-tRNA synthetase [Rickettsiella grylli]
 gi|159120338|gb|EDP45676.1| threonyl-tRNA synthetase [Rickettsiella grylli]
          Length = 642

 Score =  668 bits (1723), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 303/619 (48%), Positives = 437/619 (70%), Gaps = 14/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPE 65
           +T PD   +    + T   VAE +   LAK A+A  ++G+  DL+ P+ +   + I+T  
Sbjct: 4   ITLPDAQQRTVANNTTVYHVAEQVGPGLAKAAIAAEVDGQFVDLTYPITKNIHLRIVTAR 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           DP +L +IRHS AH++A AV+ ++P  QV +GP+IE+GFYYDF    PF+ ++L  IEK+
Sbjct: 64  DPEALTIIRHSTAHLLAHAVKQLFPMAQVTMGPVIENGFYYDFALSHPFTPEDLLNIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+E++ +D P  +  L  ++A + F++  E YK EI+ +IP +E ++LYR+G++ DLCRG
Sbjct: 124 MRELVKQDIPIQRSTLPRDEAIQFFKALGEDYKAEIITAIPKEEVLSLYREGDFVDLCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV STG++K  FKL  VAGAYWRGD+   ML RIYGTAW T+++L ++LY L+E+EKRD
Sbjct: 184 PHVPSTGKLK-VFKLTHVAGAYWRGDAKNEMLQRIYGTAWLTEKDLNEHLYLLKEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHL 304
           HRKL +++DLFH+ E+  G++FWH +GW ++Q +  Y+R  +K   Y+EI TPQ+L + L
Sbjct: 243 HRKLGKQLDLFHVQEEAPGMVFWHPRGWTVYQRIEQYIRSCLKKAAYQEIQTPQLLARQL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHWD +   MF       T+ +   FA+KPM+CPGH+ +FN G+KSYR+LP+RLAE
Sbjct: 303 WEKSGHWDKFFKEMFT------TVTENTEFAIKPMSCPGHIQIFNQGIKSYRDLPLRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNEPSG+LHGL+RVRGF QDD H+FCT++Q+ +E     +L+ ++Y DFGF  ++
Sbjct: 357 FGSCHRNEPSGALHGLLRVRGFVQDDGHIFCTEDQIQSEVSAFIDLLYNVYADFGFNDVI 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +KL+TRPE RVGS+A WD AE  +   LD  K      +      GEGAFYGPK E+ LK
Sbjct: 417 LKLATRPEARVGSNASWDKAEKALALALDARKG-----LEWTYAHGEGAFYGPKIEFSLK 471

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D++ R WQCGT+QVDF++P R  A YVN   E+  PVM+HRA+ GSIERFIGI+IE++ G
Sbjct: 472 DSLNRIWQCGTLQVDFSMPQRLGAEYVNERGERHVPVMLHRAILGSIERFIGILIEHYAG 531

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
           + PLWL+P Q ++ TIT     YA+EIA  L++  L ++ D RNE I++KIREHS++KIP
Sbjct: 532 HFPLWLAPTQIVIMTITDKQHHYAKEIAQELEALALRVKLDLRNEKISFKIREHSLQKIP 591

Query: 605 IIIICGDKEASERSIGIRR 623
             ++ GD+E + + + +RR
Sbjct: 592 YQLVIGDQEVASKQVTVRR 610


>gi|225025724|ref|ZP_03714916.1| hypothetical protein EIKCOROL_02627 [Eikenella corrodens ATCC
           23834]
 gi|224941505|gb|EEG22714.1| hypothetical protein EIKCOROL_02627 [Eikenella corrodens ATCC
           23834]
          Length = 635

 Score =  667 bits (1722), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 303/625 (48%), Positives = 428/625 (68%), Gaps = 15/625 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEI 61
           S I +T PDGS++ +    T + +A SI   LAK  VA  +NG + D  DP+ E  +++I
Sbjct: 2   SQINITLPDGSVRQYEAPVTVAQIAASIGSGLAKATVAGKVNGVLRDACDPITEDAAVQI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           ITP+DP  + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A 
Sbjct: 62  ITPKDPEGVEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAA 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE +M+E+I +D   +K      +  ++F+ + E YK+ ++E +P  E + +Y   E+ D
Sbjct: 122 IEARMKELINQDYDVVKIMTPRAETIKIFQERGEEYKLRLIEDMPEVEAMGMYHHQEYVD 181

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           +CRGPHV +T +  K FKL K+AGAYWRGDSN  ML RIYGTAW ++ EL  Y+  +EE+
Sbjct: 182 MCRGPHVPNT-RFLKHFKLTKLAGAYWRGDSNNEMLQRIYGTAWASKDELKAYITRIEEA 240

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVL 300
           EKRDHR+L +++DLFH+ ++  G++FWH +GW ++QT+  +MRR++    Y E+ TPQ+L
Sbjct: 241 EKRDHRRLGKQLDLFHLQDEAPGMVFWHPRGWTLWQTIEQHMRRELDAAGYREVKTPQIL 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D+  W++SGHW +Y+ NMF       T  + R +A+KPMNCPGHV +FNHGL+SYR+LP+
Sbjct: 301 DKTFWEKSGHWANYKDNMFT------TSSEKRDYAVKPMNCPGHVQIFNHGLRSYRDLPM 354

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLAEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+  E    + L++ IYK FGF
Sbjct: 355 RLAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIAEETRAFNQLVMKIYKQFGF 414

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           E + +KLS RPE+R G+D  WD AE  ++  L       ++      L GEGAFYGPK E
Sbjct: 415 EHVSIKLSLRPEQRAGTDETWDKAEQGLRDALTACGVQWEE------LPGEGAFYGPKVE 468

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           Y +KDA+GR WQCGTIQ+DF LP R  A YV   + +  PVM+HRA+ GS+ERFIGI+IE
Sbjct: 469 YHIKDALGRSWQCGTIQLDFVLPERLGAEYVTEDNGRARPVMLHRAILGSLERFIGILIE 528

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              G+ PLWL+P+Q +V  IT    +Y  E+ N LK+  L  E D RNE I YKIR++S 
Sbjct: 529 EHAGSFPLWLAPVQMVVMNITEKQADYCLEVVNKLKAAGLRAEADLRNEKIGYKIRDNSQ 588

Query: 601 KKIPIIIICGDKEASERSIGIRRFG 625
            + P  ++ GDKE     + +RR G
Sbjct: 589 MRYPYQVVVGDKEMENGQVAVRRKG 613


>gi|319943475|ref|ZP_08017757.1| threonine--tRNA ligase [Lautropia mirabilis ATCC 51599]
 gi|319743290|gb|EFV95695.1| threonine--tRNA ligase [Lautropia mirabilis ATCC 51599]
          Length = 636

 Score =  667 bits (1722), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 311/640 (48%), Positives = 437/640 (68%), Gaps = 15/640 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPE 65
           +T PDGS + F    T + +A +I   LAK A+A  +NGK+ DLS  V E   + I+T +
Sbjct: 4   ITLPDGSQRRFDDAVTVAQIAAAIGPGLAKAAIAGRVNGKLVDLSRTVSEDAEVAIVTDK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           DP  L +IRHS AH+MA AVQ ++PE QV IGP+IE+GFYYDF  ++PF+ ++LA IEK+
Sbjct: 64  DPEGLDIIRHSTAHLMAYAVQDLFPEAQVTIGPVIENGFYYDFAYKRPFTPEDLAAIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M E+   D   +++    ++A + FES  E YK EI+ SIPA+E +T YR+G + DLCRG
Sbjct: 124 MHELAKLDETVVREEWDRQEAVKYFESIGEKYKAEIIASIPAEEGITFYREGRFVDLCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV STG++K  FKLMKVAGAYWRGD+N  ML RIYGTAW  +++   YL+ LEE+EKRD
Sbjct: 184 PHVPSTGKLK-VFKLMKVAGAYWRGDANNEMLQRIYGTAWARKEDQDAYLHMLEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHL 304
           HRKL +++DLFH   +  G++FWH +GW I+Q +  Y+R K  K+ Y+E+  PQ+LD  L
Sbjct: 243 HRKLGKDLDLFHTQAEAPGMVFWHPRGWTIWQRIEQYIREKYQKNGYQEVRCPQILDVDL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHWD+Y+ NMF  +       + R +A+KPMNCPGHV +FN  L+SYR+LP+R AE
Sbjct: 303 WKRSGHWDNYKENMFFSES------EKREYAVKPMNCPGHVQLFNASLRSYRDLPLRYAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNEPSG+LHG+MRVRGFTQDD H+FCT+EQ+  E    H   +++Y+DFGF  + 
Sbjct: 357 FGSCHRNEPSGALHGIMRVRGFTQDDGHIFCTEEQVEAEVTAFHQQAMAVYRDFGFTDVS 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           VKL+ RP +R+G+D  WD AEN ++  L     + ++      L GEGAFYGPK EY LK
Sbjct: 417 VKLALRPTQRLGTDEAWDRAENALRAALSACDVAWEE------LPGEGAFYGPKIEYHLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D+IGR WQ GTIQ D  +P R +A YV   + +  P+M+HRA+ GS+ERFIG++IE+  G
Sbjct: 471 DSIGRAWQVGTIQYDPMMPERLDAEYVAEDNSRRRPIMLHRAIVGSMERFIGMLIEHHAG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
            +P WL+P+Q  V T+T +A +YA++I   L      + +D R + I YKIREHS++KIP
Sbjct: 531 AMPTWLAPVQVAVLTVTDTAADYAEDIRQRLIKQGFRVISDLRGDKIGYKIREHSLQKIP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            +++ G+K+    ++ +R  G      +S      +L ++
Sbjct: 591 YLVVVGEKDRQAGTLAVRARGGKDLGSMSFEGFASLLAQQ 630


>gi|254481727|ref|ZP_05094970.1| threonyl-tRNA synthetase [marine gamma proteobacterium HTCC2148]
 gi|214037856|gb|EEB78520.1| threonyl-tRNA synthetase [marine gamma proteobacterium HTCC2148]
          Length = 640

 Score =  667 bits (1720), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 318/618 (51%), Positives = 432/618 (69%), Gaps = 15/618 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  DVA  I   LAK A+A  ++G+  D S  V  + ++ IIT  
Sbjct: 4   ITLPDGSQRAFENPVSVHDVAADIGPGLAKAALAGVVDGREVDTSHIVEADAALAIITER 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L VIRHS AH++A+A Q ++P +QV IGP+IEDGF+YDF     F+ ++L +IE++
Sbjct: 64  DEAGLEVIRHSTAHLLAQATQQLFPGIQVTIGPVIEDGFFYDFATGHNFTPEDLEKIEQR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+EI+ +D    +   S EKA E+F +  E YKV+I+E +PA E +++Y+QG W DLCRG
Sbjct: 124 MEEIVQQDLTVERIVCSREKAVEIFRNMGERYKVQIIEELPADEEISIYQQGAWMDLCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV STG++K F KL KVAGAYWRGDSN  ML R+YGTAW  +++L QYL  +EE+EKRD
Sbjct: 184 PHVPSTGKLKAF-KLTKVAGAYWRGDSNNEMLQRVYGTAWANKKQLKQYLNRIEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHL 304
           HRK+ +++DLFH  E+  G++FWH  GW I+QT+  YMR  + + DY+EI TPQ++D  L
Sbjct: 243 HRKIGKKLDLFHTQEEAPGMVFWHPAGWSIYQTIEQYMREGQQQHDYQEIKTPQLVDLSL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGH D +  +MF +K  D      R FA+KPMNCP HV VFN GLKSYR+LP+RLAE
Sbjct: 303 WKKSGHADKFGDDMFMLKAED------REFAVKPMNCPCHVQVFNQGLKSYRDLPLRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNEPSGSLHG+MRVRGF QDDAH+FCT+EQ+  E     + + S+Y+DFGF  ++
Sbjct: 357 FGSCHRNEPSGSLHGIMRVRGFVQDDAHIFCTEEQIQPEVSSFIDFLHSVYEDFGFADVI 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
            +LSTRPE+RVGSD  WD AE  +   L+     +QD +    L GEGAFYGPK E+ LK
Sbjct: 417 YRLSTRPEQRVGSDQDWDRAEKALADALN-----AQD-LPWETLPGEGAFYGPKIEFSLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D IGR WQ GTIQVDF++P R +A YV     +  PVM+HRA+ GS ERFIGI+IE+++G
Sbjct: 471 DCIGRVWQLGTIQVDFSMPGRLDAQYVAEDGSRQVPVMLHRAILGSFERFIGILIEHYEG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P WL+P QA+V  IT    EYA+ + + LK+    + +D RNE I +KIREH+I+K+P
Sbjct: 531 IFPTWLAPTQAVVLNITDKQSEYAKSVEDSLKNKGFRVISDLRNEKIGFKIREHTIQKVP 590

Query: 605 IIIICGDKEASERSIGIR 622
            +++ GDKE   +++ +R
Sbjct: 591 YLLVVGDKEVESQTLAVR 608


>gi|225630645|ref|YP_002727436.1| threonyl-tRNA synthetase [Wolbachia sp. wRi]
 gi|254783546|sp|C0R403|SYT_WOLWR RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|225592626|gb|ACN95645.1| threonyl-tRNA synthetase [Wolbachia sp. wRi]
          Length = 633

 Score =  667 bits (1720), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 316/642 (49%), Positives = 444/642 (69%), Gaps = 18/642 (2%)

Query: 5   IKLTF-PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           I++TF  +  +K +    TG D+ +     + K+A+A  +NG++ DLS  +  +  IE+I
Sbjct: 2   IRITFSAEQKVKEYSGKVTGFDILQP---DVLKEAIAFKVNGELHDLSREIEADAEIEVI 58

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
              D   L +IRH  AHIMA+AV+ ++P  Q+ IGP I+DGFYYDF   + F++D+L  I
Sbjct: 59  QLSDEAGLDIIRHDAAHIMAQAVKELFPNTQITIGPTIQDGFYYDFATGRTFTTDDLTAI 118

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EKKM+EI+  +  F+++  + ++A + F    E YKV+I+ SIP  EN+T+YRQG++ DL
Sbjct: 119 EKKMKEIVKSNHRFVREVWTRKQAIDFFSDIGEKYKVDIISSIPEGENLTVYRQGDFIDL 178

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH  STG+VK F KLMKVAGAYWRGD+  PML RIYGTAW  + EL  YL  L+E+E
Sbjct: 179 CRGPHSPSTGRVKAF-KLMKVAGAYWRGDAKGPMLQRIYGTAWRNKDELNAYLECLKEAE 237

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLD 301
           KRDHRK+A++MDLFHI E+  G +FWH +G+ ++  L SY+R+K I + Y E+ TP ++ 
Sbjct: 238 KRDHRKIAKDMDLFHIQEEAVGQVFWHEQGYILYNVLESYIRKKLINNGYFEVKTPILVS 297

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW++SGHWD +R NMF V  ++      +  A+KPMNCP HV +FN   +SYR+LP+R
Sbjct: 298 KELWEKSGHWDKFRENMFIVDESES-----KKLAIKPMNCPCHVQIFNSHTRSYRDLPIR 352

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AEFG+ +RNE SGSLHGLMRVRGFTQDDAH+FC +EQ+ +E +K  +L+  +Y + GF 
Sbjct: 353 MAEFGTCHRNESSGSLHGLMRVRGFTQDDAHIFCMEEQVNSETIKFCDLLKEVYSELGFN 412

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
           +I VK S RP+ R G D +WD AE   K +L+ +K +    ++  +  GEGAFYGPK E+
Sbjct: 413 EISVKFSDRPDVRAGDDEVWDRAE---KALLEAVKEAG---LSYELSPGEGAFYGPKLEF 466

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
           +LKDAIGR WQCGT+QVDF LP R  AFY+ +   K HPVM+HRA+ G+ ERFIGI+IEN
Sbjct: 467 VLKDAIGRSWQCGTLQVDFILPERLGAFYIGADGHKHHPVMLHRAILGTFERFIGILIEN 526

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  P+WL+P Q  + TIT+ A  YA +I+N+LK   + ++TD  NE I+YKIR HS+ 
Sbjct: 527 YAGKFPVWLAPTQLAILTITNEADGYATKISNVLKEQGVRVKTDLTNEKISYKIRLHSLN 586

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           K+PI+ I G  E + +++ +R  GS   +  SL  AI +L K
Sbjct: 587 KVPILWIVGKNEVTSKTVSVRNLGSERQESFSLEKAIELLLK 628


>gi|329904275|ref|ZP_08273747.1| Threonyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480]
 gi|327548052|gb|EGF32784.1| Threonyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480]
          Length = 635

 Score =  666 bits (1719), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 316/625 (50%), Positives = 433/625 (69%), Gaps = 15/625 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           + +  PDGS + F    T + VA SI   LAK A+A  ++GKV D S  + R+  + IIT
Sbjct: 2   VSVRLPDGSQRQFDQAVTVAQVAASIGAGLAKAALAGKVDGKVVDTSFLIDRDVDLAIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   + VIRHS AH++A AV+ ++P+ QV IGP IE+GFYYDF  ++PF+ D+L  IE
Sbjct: 62  DKDADGVDVIRHSTAHLLAYAVKELFPDAQVTIGPTIENGFYYDFSYKRPFTPDDLVTIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           KKM E+  RD P  +Q +S + A   F +  EAYK E++ +IPA + V+LY +G++ DLC
Sbjct: 122 KKMLELAKRDEPVTRQVMSRDDAIAYFLAIGEAYKAELIGAIPADQEVSLYTEGKFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV STG++K  FKLMK+AGAYWRGDS   ML RIYGTAW  +++   YL+ LEE++K
Sbjct: 182 RGPHVPSTGKLK-VFKLMKLAGAYWRGDSKNEMLQRIYGTAWARKEDQEAYLHMLEEADK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQ 302
           RDHRKL R +DLFH  E+  G+IFWH KGW ++Q +  YMRR  +D+ Y+E+  PQ+LD 
Sbjct: 241 RDHRKLGRLLDLFHFQEEAPGMIFWHPKGWSVWQQVEQYMRRVYQDNGYQEVKAPQILDI 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHW++Y+ NMF       T  + R++ALKPMNCPGHV +F   ++SYR+LP+R 
Sbjct: 301 SLWEKSGHWENYKENMFT------TESEKRSYALKPMNCPGHVQIFRSDMRSYRDLPLRY 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG  +RNEPSGSLHG+MRVRGFTQDD H+FCT++Q+  EC+    L+  +Y DFGF  
Sbjct: 355 GEFGQCHRNEPSGSLHGIMRVRGFTQDDGHIFCTEDQILEECVAYTALLHKVYADFGFAN 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I  K++TRPEKRVGS+  WD AEN +   L+  ++  +  I+ G    EGAFYGPK EY 
Sbjct: 415 ITYKVATRPEKRVGSEEAWDKAENALITSLE--RSGCEFEISPG----EGAFYGPKIEYT 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L DAIGR WQCGT+QVDF++P R  A YV   + +  PVM+HRA+ GS ERFIG+++EN+
Sbjct: 469 LTDAIGRAWQCGTMQVDFSMPIRLGAEYVAEDNSRKVPVMLHRAILGSFERFIGMLLENY 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G LP+WL+P+Q +V  I+    +YA+ +   LK     +E+D RNE I +KIREHS++K
Sbjct: 529 SGALPMWLAPVQVVVLNISEGQSDYARSVTQSLKKQGFRVESDLRNEKITFKIREHSVQK 588

Query: 603 IPIIIICGDKEASERSIGIRRFGST 627
           +P II+ GDKE    ++ +R  G+ 
Sbjct: 589 VPYIIVVGDKERDAATVAVRARGNA 613


>gi|319942329|ref|ZP_08016644.1| threonyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
 gi|319804202|gb|EFW01102.1| threonyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
          Length = 636

 Score =  666 bits (1718), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 316/630 (50%), Positives = 434/630 (68%), Gaps = 15/630 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T P GS + +    T + VA SI   LAK A+A  ++GK+ DLS  +  + ++ IIT  
Sbjct: 4   VTLPGGSKREYEGPVTVAQVAASIGAGLAKAALAGRVDGKLVDLSHVIDGDAAVAIITAR 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           DP  L +IRHS AH+MA+AV+ ++PE QV IGP IE+GFYYDF   + F+ ++L  IE +
Sbjct: 64  DPEGLEIIRHSTAHLMAQAVKELFPEAQVTIGPAIENGFYYDFSYTRAFTPEDLKAIEAR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M E++ ++ P +++ +  E+A + F++  E YK EI+ SIPA E ++LYRQG++ DLCRG
Sbjct: 124 MDELVKKNIPIVREEMPREEAIDFFKALGEHYKAEIISSIPAGEVISLYRQGDFVDLCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV STG +K    LMKVAGAYWRGDS   ML RIYGTAW T+ E   YL  L E+EKRD
Sbjct: 184 PHVPSTGCLK-VHHLMKVAGAYWRGDSKNEMLQRIYGTAWATKDEQKAYLEMLAEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHL 304
           HR+L RE+DLFH+ ++  G++FWH KGW ++Q +  +MRR  +D+ YEE+  PQ+LD+ L
Sbjct: 243 HRRLGRELDLFHLQDEAPGMVFWHAKGWALWQVIEQFMRRVYQDNGYEEVKAPQLLDRSL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHW  YR NMF  +  +      R +ALKPMNCPGH+ +FN  L+SYR+LP+R+ E
Sbjct: 303 WERSGHWAKYRDNMFTTESEN------RYYALKPMNCPGHIQIFNSKLRSYRDLPLRIGE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FG  +RNE SGSLHGLMRVRGFTQDD H+FCT++Q+  EC     L+  +YK FGF  I 
Sbjct: 357 FGQCHRNESSGSLHGLMRVRGFTQDDGHIFCTEDQILAECEAFTALVQKVYKTFGFTDIA 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
            K++TRP  R+G DA+WD AE+ +   LD +       I   VL+GEGAFYGPK EY LK
Sbjct: 417 YKVATRPAMRIGEDAVWDKAEHALMASLDALG------IKYEVLVGEGAFYGPKIEYHLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D +GR WQCGT+QVDF +P R  A YV   + +  PVM+HRA+ GS+ER+IG++IE F G
Sbjct: 471 DCLGRSWQCGTVQVDFQMPGRLGAEYVAEDNSRKIPVMLHRAILGSLERWIGMLIEEFAG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P+WL+PIQ  VT+IT +   YA+++A  L +  L ++TD R+E INYKIRE S++K+P
Sbjct: 531 AFPVWLAPIQCAVTSITDNQGAYAKDVAAKLHAAGLRVQTDLRSEKINYKIRELSLQKLP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSL 634
            I++ G+KEA   ++ +R  G      +SL
Sbjct: 591 YILVVGEKEAQTGTVSVRARGGENLGVMSL 620


>gi|74317025|ref|YP_314765.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Thiobacillus
           denitrificans ATCC 25259]
 gi|123731846|sp|Q3SK34|SYT_THIDA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|74056520|gb|AAZ96960.1| threonyl-tRNA synthetase, class IIa [Thiobacillus denitrificans
           ATCC 25259]
          Length = 637

 Score =  665 bits (1716), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 320/645 (49%), Positives = 445/645 (68%), Gaps = 15/645 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           + +T PDGS++ F    T ++VA SI   LAK A+A  ++GK+ D S  +  +  + I+T
Sbjct: 2   VTVTLPDGSVRPFEGPVTVAEVASSIGAGLAKAALAGKVDGKLVDTSYVIDADAQLAIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D  +L +IRH  AH+MA+AVQ ++P  QV IGP IEDGFYYDF +EQPF+ ++L +IE
Sbjct: 62  AKDAEALDLIRHDAAHVMAQAVQELYPGTQVTIGPAIEDGFYYDFAREQPFTPEDLEKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDL 182
           K+M EI+ RD P  ++  S ++A ++F    E YKV+I+ E IP  E +++YRQGEWFD+
Sbjct: 122 KRMDEIVKRDLPIRREVWSRDEAMKVFGDLGETYKVQIIDEVIPKGEELSIYRQGEWFDV 181

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ STG++ + FKLMK+AGAYWRGDS   ML RIYGTAW  +++L  YL+ LEE+E
Sbjct: 182 CRGPHLPSTGKLPRAFKLMKLAGAYWRGDSKNAMLQRIYGTAWAKKEDLEAYLHRLEEAE 241

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLD 301
           KRDHR+LA+++DL H+ ++  G++FWH KGW ++Q +  YMR K ++  Y+E+ TP V+D
Sbjct: 242 KRDHRRLAKQLDLLHMQDEAPGMVFWHPKGWIVWQQIEQYMREKFVEYGYQEVRTPAVMD 301

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + +W++SGHW++YR NMF       T  + R +A+KPMNCPGHV +FN GL SYR+LP+R
Sbjct: 302 RSMWEKSGHWENYRDNMFT------TASENRDYAVKPMNCPGHVQIFNSGLHSYRDLPLR 355

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFGS +RNEPSG+LHG+MRVRGFTQDDAH+FC +EQ+  E      ++  +Y DFGF 
Sbjct: 356 LAEFGSCHRNEPSGALHGIMRVRGFTQDDAHIFCMEEQVEQEVADFIVMLQKVYADFGFN 415

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            ++VKLSTRP+KRVGSD  WD      K          ++ ++  +  GEGAFYGPK E+
Sbjct: 416 DVLVKLSTRPDKRVGSDESWD------KAESALAAALEKNGLSFDLQPGEGAFYGPKIEF 469

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            LKD +GR WQCGTIQ+DFNLP R  A +V   + +  PVM+HRA+ GS+ERFIGI+IE+
Sbjct: 470 TLKDTLGRLWQCGTIQLDFNLPVRLGAEFVAEDNTRKIPVMLHRAILGSMERFIGILIEH 529

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             GN PLWL+P+Q +V  I+     YA+ +A  L+   +    D  N  INYKIREHS++
Sbjct: 530 HAGNFPLWLAPVQVMVMNISERQAAYAEAVAEALRRAGIRAALDLSNNKINYKIREHSLQ 589

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           K+P  ++ GDKE   R + +R  G+    ++ L D I  L  E L
Sbjct: 590 KLPYQLVVGDKEMEARVVAVRARGNQDMGQLGLDDLIARLRAEVL 634


>gi|312795972|ref|YP_004028894.1| Threonyl-tRNA synthetase [Burkholderia rhizoxinica HKI 454]
 gi|312167747|emb|CBW74750.1| Threonyl-tRNA synthetase (EC 6.1.1.3) [Burkholderia rhizoxinica HKI
           454]
          Length = 643

 Score =  665 bits (1716), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 306/625 (48%), Positives = 433/625 (69%), Gaps = 15/625 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I +  PDGSI+ +    T ++VA SI   LAK A+   I+G++ D S  + R+ ++ I+T
Sbjct: 10  ISVRLPDGSIRQYDHPVTVAEVAASIGPGLAKAALGGKIDGELVDTSAVIQRDANVSIVT 69

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +DP  L +IRHS AH++A AV+ ++P+ QV IGP++++GFYYDF   + F+ ++L  IE
Sbjct: 70  DKDPEGLEIIRHSTAHLLAYAVKELFPQAQVTIGPVVDNGFYYDFAYHRAFTPEDLQSIE 129

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           ++M E+  +D P  ++ +S ++A + F+   E YK EI+ESIP  E + LY  G + DLC
Sbjct: 130 QRMHELAKKDEPVSRRVVSRDEAVDYFKRIGERYKAEIIESIPQGEQIKLYSHGGFTDLC 189

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV STG++K  FKLMK+AGAYWRGDS+   L RIYGTAW  ++E   YL+ LEE+EK
Sbjct: 190 RGPHVPSTGKLK-VFKLMKLAGAYWRGDSHNEQLQRIYGTAWARKEEQDAYLHMLEEAEK 248

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ E+  G++FWH KGW ++Q +  Y+RR++ +  Y E+ TP ++D+
Sbjct: 249 RDHRKLGKQLDLFHLQEEAPGLVFWHPKGWALWQQVEQYLRRRLGEAGYLEVKTPMIMDR 308

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHW +YR NMF       T  + R +A+KPMNCPGHV VFNH L SYR+LP+R 
Sbjct: 309 SLWERSGHWQNYRENMFT------TESEKRDYAIKPMNCPGHVQVFNHSLHSYRDLPLRF 362

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNE SG+LHGLMRVRGF QDDAH+FCT++Q+  E +  ++L +S+YKDFGFE+
Sbjct: 363 AEFGSCHRNEASGALHGLMRVRGFVQDDAHIFCTEDQVIAESIAFNSLAMSVYKDFGFEQ 422

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I +KL+ RP++R G+D  WD AE  ++  L       Q+      L GEGAFYGPK EY 
Sbjct: 423 IDIKLALRPQQRAGTDETWDRAEQGLREALAACSLQWQE------LDGEGAFYGPKIEYH 476

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+GR WQCGT+Q+DF LP R  A YV   + +  PVM+HRA+ GS+ERF+GI+IE+ 
Sbjct: 477 IKDALGRSWQCGTLQLDFVLPERLGAEYVAEDNSRRRPVMLHRAIVGSMERFLGILIEHH 536

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G +PLWL+P Q +V  I  S+ +YA  +A  LK        D RNE I+YKIREH+++K
Sbjct: 537 AGAMPLWLAPSQVVVMNIAESSADYANIVAQSLKKQGFRAAADLRNEKISYKIREHALEK 596

Query: 603 IPIIIICGDKEASERSIGIRRFGST 627
           +P + + GDKE   +++ +R  G  
Sbjct: 597 VPYLAVVGDKERDAQTVAVRARGGV 621


>gi|90021224|ref|YP_527051.1| threonyl-tRNA synthetase [Saccharophagus degradans 2-40]
 gi|123090560|sp|Q21KE0|SYT_SACD2 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|89950824|gb|ABD80839.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Saccharophagus
           degradans 2-40]
          Length = 636

 Score =  665 bits (1715), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 315/642 (49%), Positives = 439/642 (68%), Gaps = 16/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLS-DPVREGSIEIITPE 65
           +T PDGS + +    +   VA  I   LAK  +A  ++GK  D S +  ++ S+ IIT +
Sbjct: 4   ITLPDGSKREYDAPISVMGVAADIGPGLAKATLAGVVDGKEVDASFEITQDVSLSIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
               L VIRHS AH++A+AV+ ++PE QV IGP+IEDGFYYDF   + F+ ++L  IE+K
Sbjct: 64  SEEGLEVIRHSTAHLLAQAVKQLFPEAQVTIGPVIEDGFYYDFAYSRAFTPEDLVVIEEK 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+E+   D    ++ L  ++A   F    E YK +I++SIPA E ++LY+QG++ DLCRG
Sbjct: 124 MKELAKADFDVTRRVLPRDEASAYFRGIGEEYKAQIIDSIPANEELSLYKQGDFEDLCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV STG+++ +FKLMKVAGAYWRGDSN  ML+R+YGTAW ++++L  Y++ LEE+EKRD
Sbjct: 184 PHVPSTGKLE-YFKLMKVAGAYWRGDSNNEMLTRVYGTAWASKKDLKAYVHRLEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHL 304
           HRKL ++ DLFHI E+  G++FWH  GW I+  +  YMR   + + YEEI TPQV+D+ L
Sbjct: 243 HRKLGKKFDLFHIQEEAPGMVFWHPNGWSIYTAIEEYMREVQRLNGYEEIKTPQVVDRSL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHWD +R NMF V+       + R +A+KPMNCP HV VFN GLKSYR+LP+RLAE
Sbjct: 303 WERSGHWDKFRDNMFTVES------ESRDYAVKPMNCPCHVQVFNQGLKSYRDLPLRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FG  +RNE SG+L GLMRVRGF QDDAH+FC++  + +E     +L+  +YKDFGFE ++
Sbjct: 357 FGCCHRNEASGTLQGLMRVRGFVQDDAHIFCSESMIQDEVSVFTDLLFKVYKDFGFEDVI 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           ++LSTRPE+RVGSD +WD AE  +   LD      Q      +L GEGAFYGPK E+ LK
Sbjct: 417 IRLSTRPEQRVGSDEVWDKAEKALSDALDAKGLPWQ------LLPGEGAFYGPKIEFSLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D +GR WQCGTIQVDF++P R +A +V     +  PVM+HRA+ GS ERFIGI+IE ++G
Sbjct: 471 DCLGRVWQCGTIQVDFSMPGRLDAQFVAEDGSRQVPVMLHRAILGSFERFIGILIEEYEG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P WL+P QA++  IT +  EY +++ N LK+    + +D RNE I +KIREH+I+K+P
Sbjct: 531 AFPAWLAPTQAVLLNITDNQAEYVKKVENSLKNKGFRVNSDLRNEKIGFKIREHTIQKVP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
            +++ GD+E    S+ +R  G      V  +DA   L +E +
Sbjct: 591 YLLVVGDQEVENNSVAVRGRGGEDL-GVMTVDAFTALLEEQI 631


>gi|15604092|ref|NP_220607.1| threonyl-tRNA synthetase [Rickettsia prowazekii str. Madrid E]
 gi|2501061|sp|O05947|SYT_RICPR RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|2073475|emb|CAA72469.1| threonyl-tRNA synthetase [Rickettsia prowazekii]
 gi|3860783|emb|CAA14684.1| THREONYL-TRNA SYNTHETASE (thrS) [Rickettsia prowazekii]
 gi|292571818|gb|ADE29733.1| Threonyl-tRNA synthetase [Rickettsia prowazekii Rp22]
          Length = 635

 Score =  665 bits (1715), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 315/643 (48%), Positives = 438/643 (68%), Gaps = 15/643 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           I ++FPDGS+K F  + T  ++  +IS SLAK A+ V ING++ DLS  +  +  + I+T
Sbjct: 2   INISFPDGSVKQFAQNITAFEIVNAISMSLAKAAIVVEINGELKDLSTVIENDCKLRILT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   L +IRH  AH+ AEAV+ ++PE QV IGP IE+G+YYDF +++PFS D+LA IE
Sbjct: 62  AQDYECLEIIRHDAAHLTAEAVKELFPETQVTIGPAIENGYYYDFARDKPFSIDDLANIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            KMQE+  ++    ++    +KA E F S  E YK +I+ SIP  E +TLYRQG + DLC
Sbjct: 122 AKMQELSKKNEKITRELWDRDKAVEFFLSIGEHYKAKIIASIPEGEPITLYRQGNFIDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH  STG VK F KLMKVAGAYWRG+S   ML RIYGTAW T+++L  YL+ LEE+EK
Sbjct: 182 RGPHSPSTGFVKHF-KLMKVAGAYWRGNSRNEMLQRIYGTAWATKEQLDNYLFMLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQ 302
           RDHRK+ +E+DLFH  E+  G++FWH KGW I+ T+  Y+R+KI K+ Y E+ TP ++D+
Sbjct: 241 RDHRKIGKELDLFHFQEEAQGMVFWHDKGWSIYNTIEQYIRKKIRKNGYIEVKTPVLVDK 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW  +R +MF ++  D      +T ALKPMNCP HV +F  G+KSYR+LP+R+
Sbjct: 301 SLWEASGHWAKFRCDMFTLETDD------KTLALKPMNCPCHVQIFKQGIKSYRDLPLRM 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           +EFG  +RNE SG+LHGLMRVR   QDDAH+FC +EQ+ +E ++   L+  +YKDFGF  
Sbjct: 355 SEFGLCHRNEASGALHGLMRVRSLVQDDAHIFCAEEQITDETVRFCKLLTEVYKDFGFTD 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I VK S R E   G+D +WD AEN +K  ++  K      +N G    E AFYGPK E++
Sbjct: 415 IKVKFSDRSEICAGNDEVWDKAENALKTAIE--KAGFIYTLNPG----EAAFYGPKIEFV 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L DAIGR WQCGT+Q+DF LP R +A Y+ +  EK  PVM+HRA+ GS+ERFIGI+IE +
Sbjct: 469 LTDAIGRQWQCGTLQMDFVLPERLDANYIAASGEKKRPVMLHRAILGSLERFIGILIEEY 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P+WL+P+Q  + TIT+   +YA E+   L  + +  + +   + INYKIRE S +K
Sbjct: 529 AGKFPIWLAPVQVAIATITNDLNDYALEVQKTLIDNGVRTDINISPDKINYKIREFSNQK 588

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           IPII + G +E + + + IR+ G+   + +S+   I ++ KE+
Sbjct: 589 IPIIAVIGKQEQANKQVTIRKLGTIEQEILSIEQLIAMIKKEN 631


>gi|33862697|ref|NP_894257.1| threonyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9313]
 gi|73919817|sp|Q7V8D2|SYT_PROMM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|33634613|emb|CAE20599.1| Threonyl-tRNA synthatase [Prochlorococcus marinus str. MIT 9313]
          Length = 640

 Score =  665 bits (1715), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 319/638 (50%), Positives = 434/638 (68%), Gaps = 21/638 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPE 65
           +  PDG+ K F    T  +VAES+   LAK A+A  +NG + D   P+ + S + IIT +
Sbjct: 4   IALPDGNKKKFDQPVTIMEVAESLGPGLAKAAIAGRVNGVLLDTCIPIEKDSEVNIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   +  IRHS AH++  AV+ ++PE ++AIGP+IEDGFYYD   + PF+  +L  IE +
Sbjct: 64  DQDGIETIRHSFAHLIGHAVKQLYPEAKMAIGPVIEDGFYYDIAYDHPFTPKDLEAIEAR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+E++  D     + +S E+AR+ FE + E YK+EI++ IP  E + LYR  E+ D+CRG
Sbjct: 124 MKELVKLDYDVNVEIVSKEEARKEFEKRCEPYKIEIVDEIPENEIIKLYRHQEYTDMCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +T  ++ F KLMKV+GAYWRGDSN+ ML RIYGTAW + +EL  YL  LEE+EKRD
Sbjct: 184 PHVPNTRHLRTF-KLMKVSGAYWRGDSNKTMLQRIYGTAWGSSKELKAYLKRLEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHL 304
           HR++A++M LFH  E+  G+IFWH KGW I+Q L  Y+R  +   DY+EI TPQV+D+ L
Sbjct: 243 HRRIAKQMSLFHTQEEAPGMIFWHAKGWAIYQVLEQYIRETLSLHDYQEIRTPQVVDRSL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHW+ ++ +MF       T  + R +A+KPMNCP HV +FN GLKSYR+LP+RLAE
Sbjct: 303 WEKSGHWEKFKDDMFT------TTSENREYAIKPMNCPCHVQIFNQGLKSYRDLPIRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS  RNEPSGSLHGLMRVR F QDDAH+FCT+ Q+  E  K  +L+  +Y+ FGF+ ++
Sbjct: 357 FGSCLRNEPSGSLHGLMRVRNFVQDDAHIFCTELQVQEEVSKFIDLVFEVYRSFGFDSVL 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +KLSTRPEKRVGSD +WD +E  +   LD  K  + D     +L GEGAFYGPK E+ LK
Sbjct: 417 IKLSTRPEKRVGSDEIWDKSEKALSDALDA-KGLAWD-----LLPGEGAFYGPKIEFSLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D +GR WQCGTIQVDF++P R  A YV   S++  PVM+HRA+ GS ERFIGI+IE++ G
Sbjct: 471 DCLGRVWQCGTIQVDFSMPERLGASYVAEDSQRRTPVMLHRAILGSFERFIGILIEHYAG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
            LP+WL+P+Q +V  IT    +  Q+I   L +     E D RNE I +K+REH+++++P
Sbjct: 531 RLPIWLAPVQVVVMGITDRNAQACQDICKKLSALEYRTEVDLRNEKIGFKVREHTLQRVP 590

Query: 605 IIIICGDKEASERSIGIRR-----FGSTTTQK-VSLLD 636
            +II GDKE     + +R      FGS   +   SLLD
Sbjct: 591 FLIIIGDKEQQSGEVAVRTREGKDFGSMPLKGFTSLLD 628


>gi|92113922|ref|YP_573850.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase
           [Chromohalobacter salexigens DSM 3043]
 gi|123387452|sp|Q1QWK7|SYT_CHRSD RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|91797012|gb|ABE59151.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase
           [Chromohalobacter salexigens DSM 3043]
          Length = 632

 Score =  664 bits (1714), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 317/642 (49%), Positives = 434/642 (67%), Gaps = 15/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS K F    T   +AESI   LAK  VA  I+G   D +D +  +  + I+TP 
Sbjct: 4   VTLPDGSQKTFDSPITVMQLAESIGTGLAKACVAGKIDGVPVDTADVIEHDAEVSILTPR 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  AV+ ++P+ ++AIGP+I+DGFYYD D  Q  S ++L  IEK+
Sbjct: 64  DQEGLEIIRHSCAHLVGHAVKQLYPDAKMAIGPVIDDGFYYDIDFGQSVSPEDLEAIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+ +I  +   +++Y++ E+A   F  + E YK EI+E I   E V LY   E+ D+CRG
Sbjct: 124 MKVLIDHEYEVIREYVTKEQALATFIDRDEPYKQEIVEGIADGETVRLYHHEEYIDMCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +T  +K F KL K+AGAYWRGD+N+PML+RIYGTAW  ++ L  YL  LEE+EKRD
Sbjct: 184 PHVPNTRHLKAF-KLTKLAGAYWRGDANKPMLTRIYGTAWADKKALKTYLKRLEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHL 304
           HRKLAR++D FH+ E+  G++FWH +GW ++QT+  YMR   KD  Y+EI  PQ++D  L
Sbjct: 243 HRKLARKLDFFHMQEEAPGMVFWHPRGWTLWQTVEQYMRGVYKDSGYQEIRCPQIMDVSL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           WQ+SGHWD+Y  NMF       T  + R +ALKPMNCPGHV VFN GL+SYRELPVR  E
Sbjct: 303 WQKSGHWDNYAENMFF------TESEKREYALKPMNCPGHVQVFNSGLRSYRELPVRYGE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FG  +RNEPSG+LHG+MRVR FTQDD HVFCT+EQ+  E    H   +++Y+DFGF+ I 
Sbjct: 357 FGGCHRNEPSGALHGIMRVRAFTQDDGHVFCTEEQIEPEVTAFHRQALAVYRDFGFDDIA 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           VK++ RPEKR+GSD  WD AE  ++  L      S+  +    L GEGAFYGPK EY ++
Sbjct: 417 VKIALRPEKRLGSDDNWDRAEEALRNAL------SRCDVEWEELPGEGAFYGPKIEYHMR 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D +GR+WQ GT+QVDF +P+R  A YV     +  PVM+HRA+ GS+ERFIGI+IE++ G
Sbjct: 471 DCLGREWQVGTMQVDFMMPTRLGAQYVAEDGSRQAPVMLHRAIVGSMERFIGILIEHYAG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
           ++PLWLSP+QA+V  IT +  EYA+ +   L+   L ++TD RNE I +KIREH+++KIP
Sbjct: 531 SMPLWLSPLQAVVLNITDAQREYAESVTQRLQKSGLRVKTDLRNEKIGFKIREHTLQKIP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
            +++ GDKE    ++ +R         +S+   I  L +E +
Sbjct: 591 YLLVVGDKEVEAGAVAVRTRSGEDLGSLSVDALIARLQEEGV 632


>gi|105892737|gb|ABF75902.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Burkholderia
           cenocepacia AU 1054]
 gi|116647586|gb|ABK08227.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Burkholderia
           cenocepacia HI2424]
          Length = 618

 Score =  664 bits (1714), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 305/608 (50%), Positives = 426/608 (70%), Gaps = 15/608 (2%)

Query: 22  TGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIRHSCAHI 80
           T ++VA SI   LAK A+   ++G++ D S  + R+ S+ I+T +D   L +IRHS AH+
Sbjct: 2   TVAEVAASIGPGLAKAALGGKLDGELVDTSTVIDRDASLAIVTDKDADGLDIIRHSTAHL 61

Query: 81  MAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQY 140
           +A AV+ ++P+ QV IGP+I++GFYYDF   +PF+ ++L +IEK+MQE+  +D P  ++ 
Sbjct: 62  LAYAVKELYPDAQVTIGPVIDNGFYYDFSYNRPFTPEDLEKIEKRMQELAKKDEPVTRRV 121

Query: 141 LSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKL 200
           +S ++A   F S  E YK EI+ESIP  + + LY  G + DLCRGPHV STG++K  FKL
Sbjct: 122 VSRDEAAGYFRSIGEKYKAEIIESIPQSDEIKLYSHGGFTDLCRGPHVPSTGKLK-VFKL 180

Query: 201 MKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAE 260
           MKVAGAYWRGDS    L RIYGTAW  +++  QYL+ LEE+EKRDHRKL +++DLFH+ E
Sbjct: 181 MKVAGAYWRGDSKNEQLQRIYGTAWTKKEDQDQYLHMLEEAEKRDHRKLGKQLDLFHMQE 240

Query: 261 DGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMF 319
           +  G++FWH KGW ++Q +  YMRR++ +  Y EI TP ++D+ LW+ SGHW +YR NMF
Sbjct: 241 ESPGMVFWHPKGWALWQQVEQYMRRRVNEAGYLEIKTPMIMDRSLWEASGHWQNYRENMF 300

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHG 379
                  T  + R +A+KPMNCPGHV VF HGL+SYR+LP+R AEFGS +RNE SG+LHG
Sbjct: 301 T------TESEKRDYAIKPMNCPGHVQVFKHGLRSYRDLPLRYAEFGSCHRNEASGALHG 354

Query: 380 LMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDA 439
           LMRVRGF QDDAH+FCT++Q  +E +  + L +S+YKDFGF+ I +KLS RP++R G+D 
Sbjct: 355 LMRVRGFVQDDAHIFCTEDQFISESIAFNTLAMSVYKDFGFDHIDIKLSLRPDQRAGTDE 414

Query: 440 LWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVD 499
            WD AE  ++  L     + ++      L GEGAFYGPK EY +KDA+GR WQCGT+Q+D
Sbjct: 415 TWDRAEQGLRDALTACGLTWEE------LPGEGAFYGPKIEYHIKDALGRSWQCGTLQLD 468

Query: 500 FNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTT 559
             LP R  A YV   + +  PVM+HRA+ GS+ERF+GI+IE+  G +P+WL+P QAIV  
Sbjct: 469 MVLPERLGAEYVAEDNSRRRPVMLHRAIVGSMERFLGILIEHHAGAMPVWLAPYQAIVLN 528

Query: 560 ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSI 619
           I  S  EYAQ +   L+   + +  D RNE I+YKIREH+++K+P +++ GDKE   +++
Sbjct: 529 IAESQAEYAQSLTQTLQKQGVRVAADLRNEKISYKIREHTLEKVPYLLVVGDKERDAQTV 588

Query: 620 GIRRFGST 627
            +R  G  
Sbjct: 589 AVRARGGV 596


>gi|257139340|ref|ZP_05587602.1| threonyl-tRNA synthetase [Burkholderia thailandensis E264]
          Length = 593

 Score =  664 bits (1714), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 309/606 (50%), Positives = 423/606 (69%), Gaps = 15/606 (2%)

Query: 9   FPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDP 67
            PDGSI+ +    T ++VA SI   LAK A+   ++G++ D S  + R+ S+ I+T +D 
Sbjct: 1   MPDGSIRQYEHPVTVAEVAASIGPGLAKAALGGKLDGELVDTSALIDRDASLAIVTDKDA 60

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQ 127
             L +IRHS AH++A AV+ + P+ QV IGP+I++GFYYDF   +PF+ ++L  IEK+MQ
Sbjct: 61  DGLDIIRHSTAHLLAYAVKELHPDAQVTIGPVIDNGFYYDFSYHRPFTPEDLEAIEKRMQ 120

Query: 128 EIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPH 187
           E+  RD P  ++ +S ++A   F S  E YK EI+ESIPA + + LY  G + DLCRGPH
Sbjct: 121 ELAKRDEPVTRRVVSRDEAVSYFRSIGEKYKAEIIESIPASDEIKLYSHGGFTDLCRGPH 180

Query: 188 VRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHR 247
           V STG++K  FKLMKVAGAYWRGDS    L RIYGTAW  +++   YL+ LEE+EKRDHR
Sbjct: 181 VPSTGKLK-VFKLMKVAGAYWRGDSKNEQLQRIYGTAWTKKEDQDAYLHMLEEAEKRDHR 239

Query: 248 KLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQ 306
           KL +++DLFHI E+  G++FWH KGW ++Q +  YMRR++    Y EI TP ++D+ LW+
Sbjct: 240 KLGKQLDLFHIQEEAPGMVFWHPKGWTLWQRVEQYMRRRLDAAGYLEIKTPMIMDRSLWE 299

Query: 307 QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFG 366
            SGHW +YR NMF       T  + R +A+KPMNCPGHV VF HGL+SYR+LP+R AEFG
Sbjct: 300 ASGHWQNYRENMFT------TESEKRDYAIKPMNCPGHVQVFKHGLRSYRDLPLRYAEFG 353

Query: 367 SVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK 426
           S +RNE SG+LHGLMRVRGF QDDAH+FCT++Q+ +E +  + L +S+Y+DFGF++I +K
Sbjct: 354 SCHRNEASGALHGLMRVRGFVQDDAHIFCTEDQINSEAIAFNKLAMSVYEDFGFDRIDIK 413

Query: 427 LSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDA 486
           LS RPE+R+GSD  WD AE  ++  L       ++      L GEGAFYGPK EY +KDA
Sbjct: 414 LSLRPEQRMGSDETWDHAEEGLRNALKACGLEWEE------LPGEGAFYGPKIEYHIKDA 467

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNL 546
           +GR WQCGT+Q+D  LP R  A YV   + +  PVM+HRA+ GS+ERF+GI+IE+  G +
Sbjct: 468 LGRSWQCGTLQLDMMLPERLGAEYVAEDNSRRRPVMLHRAIVGSMERFLGILIEHHAGAM 527

Query: 547 PLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPII 606
           P WL+P  A+V  I  S  EYAQ +   L+   L +  D RNE I+YKIREH+++K+P +
Sbjct: 528 PAWLAPFHAVVLNIAESQAEYAQTVVQSLQKQGLRVSADLRNEKISYKIREHTLEKVPYL 587

Query: 607 IICGDK 612
           ++ GDK
Sbjct: 588 LVLGDK 593


>gi|53805116|ref|YP_113204.1| threonyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
 gi|73919805|sp|Q60AZ3|SYT_METCA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|53758877|gb|AAU93168.1| threonyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
          Length = 638

 Score =  664 bits (1714), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 314/642 (48%), Positives = 440/642 (68%), Gaps = 15/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    T   VAE+I   LAK A+A  ++G++ DLS  +  +  + ++T  
Sbjct: 4   VTLPDGSRREFDHPVTLLQVAEAIGPGLAKAALAGRVDGRLVDLSHRIEADAEVALVTAR 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   + VIRHS AH++A+AV++++P+ QV IGP+I+DGFYYDF  E+PF+ ++L  IE K
Sbjct: 64  DADGVEVIRHSTAHLLAQAVKALYPKAQVTIGPVIQDGFYYDFSYERPFTPEDLEAIEAK 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M E+ A+  P  ++ +  E+A   F S  EAYK EI+E+IP  E ++LY QG++ DLCRG
Sbjct: 124 MHELAAQALPVERRTMPREEAIAYFRSLGEAYKAEIIEAIPRGEVISLYSQGDFTDLCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV  TG++  F KLMK+AGAYWRGDS   ML RIYGTAW  +++L  YL  LEE+E+RD
Sbjct: 184 PHVPDTGRLNAF-KLMKIAGAYWRGDSRNEMLQRIYGTAWGDRKDLAAYLQRLEEAERRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHL 304
           HRKL + +DLFH+ E+  G++FWH KGW ++Q +  YMRR  +D+ Y+EI TP V+ + L
Sbjct: 243 HRKLGKALDLFHMQEEAPGMVFWHPKGWILWQEIEQYMRRVFRDNGYQEIRTPLVVARTL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHW+ +   MF       T  + R +A+KPMNCP HV V+N GLKSYR+LP+RLAE
Sbjct: 303 WERSGHWEKFSDEMFT------TASEERDYAIKPMNCPCHVQVYNQGLKSYRDLPLRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNE SG+LHGLMRVRGFTQDDAH+FCT+EQ+ +E  +  +L+  +Y DFGF ++ 
Sbjct: 357 FGSCHRNELSGALHGLMRVRGFTQDDAHIFCTEEQIQDEVSRFIDLLFKVYADFGFSEVQ 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +KLSTRPEKRVGSD +WD AE+ ++  L+  K  + D     +  GEGAFYGPK E+ LK
Sbjct: 417 IKLSTRPEKRVGSDEVWDKAEHALETALNA-KGLAWD-----LQPGEGAFYGPKIEFSLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D + R WQCGTIQVDF++P R  A YV     +  PVM+HRA+ GS+ERF+GI+ E++ G
Sbjct: 471 DCLDRVWQCGTIQVDFSMPDRLGATYVAEDGARHVPVMLHRAILGSLERFVGILTEHYAG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             PLWL+P+QA+V  IT    +YA+E+A    S    +  D RNE + +KIREHS++++P
Sbjct: 531 QYPLWLAPVQAVVLNITDRQADYAREVAQEFVSKGFRVIADLRNEKVGFKIREHSMQRVP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
            ++I GDKE    S+ +R           + D +   T+E++
Sbjct: 591 YLLIVGDKEVEAGSVSLRTRDGKDHGSFGIGDLVAKFTEETM 632


>gi|237653686|ref|YP_002890000.1| threonyl-tRNA synthetase [Thauera sp. MZ1T]
 gi|237624933|gb|ACR01623.1| threonyl-tRNA synthetase [Thauera sp. MZ1T]
          Length = 638

 Score =  664 bits (1713), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 318/636 (50%), Positives = 437/636 (68%), Gaps = 18/636 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP+   +T PDGS+++F    T ++VA SI   LAK A+A   +GK+ DLS     +  +
Sbjct: 1   MPN---ITLPDGSVRSFDHPVTVAEVAASIGAGLAKAAIAGRTDGKLVDLSHRFEADADL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            I+T ++   L +IRHS AH++A AV+ ++P+ QV IGP+I++GFYYDF  ++PF+ ++L
Sbjct: 58  AIVTDKNAEGLEIIRHSTAHLLAHAVKELFPDAQVTIGPVIDNGFYYDFSYKRPFTPEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IE++M EI  R+ P  ++    +KA + F+   E YK EI+ SIPA E+V+LYRQG++
Sbjct: 118 QAIEQRMAEIAKREIPVHREVWPRDKAVDFFKGIGEHYKAEIIASIPAGEDVSLYRQGDF 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV STG++K  FKLMK+AGAYWRGDS   ML R+YGTAW  + EL  YL+ +E
Sbjct: 178 IDLCRGPHVPSTGKLK-VFKLMKLAGAYWRGDSKNEMLQRVYGTAWTKKDELDAYLHMIE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+EKRDHRKL R++DLFHI ++  G++FWH KGW ++Q +  Y+RR I +  Y+E+ TPQ
Sbjct: 237 EAEKRDHRKLGRQLDLFHIQDEAPGMVFWHAKGWTLWQQVEQYLRRTIGEHGYQEVKTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D+ LW++SGHW  Y   MF       T  + R +A+KPMNCP H+ +FN GLKSYR+L
Sbjct: 297 IVDRSLWEKSGHWGMYSDLMFT------TQSEKRDYAVKPMNCPCHIQIFNQGLKSYRDL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFGS +RNEPSGSLHG+MRVR F QDDAH+FC + Q+  E  +   L+  +Y+DF
Sbjct: 351 PLRMAEFGSCHRNEPSGSLHGIMRVRNFVQDDAHIFCAESQVQAESAEFIRLLQQVYQDF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF  + VKLSTRPEKRVG+D  WD AE  +              +   +  GEGAFYGPK
Sbjct: 411 GFTDVQVKLSTRPEKRVGTDEQWDAAEAALA------AALDAQGLQYELQPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD +GR WQCGT+Q+DFNLP R  A YV+  + K  PVM+HRA+ GS+ERFIGI+
Sbjct: 465 IEFSLKDCLGRVWQCGTLQLDFNLPVRLGAEYVDEDNTKKVPVMLHRAILGSLERFIGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+  G +PLWL+P+QA+V  I+    EYA+E    LK     +E D RNE INYKIREH
Sbjct: 525 IEHHAGAMPLWLAPVQAVVMNISEGQAEYAEEAVARLKKAGFRVEADLRNEKINYKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           S++K+P  I+ G+KE +   + +R  G     ++SL
Sbjct: 585 SVQKLPYQIVIGEKEKAAGLVAVRARGGQDLGQMSL 620


>gi|71066652|ref|YP_265379.1| threonyl-tRNA synthetase [Psychrobacter arcticus 273-4]
 gi|123775558|sp|Q4FPW3|SYT_PSYA2 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|71039637|gb|AAZ19945.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Psychrobacter
           arcticus 273-4]
          Length = 644

 Score =  664 bits (1713), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 309/620 (49%), Positives = 429/620 (69%), Gaps = 15/620 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDP-VREGSIEIIT 63
           + +T PDGS+KNF  + T  +VA+SI   LAK  VA  ++G + D  DP V +  +EI+T
Sbjct: 2   VAITLPDGSVKNFEGNTTVMEVAQSIGTGLAKATVAGRVDGHLVDAHDPIVADAKVEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P D   + +IRHSCAH++  AV+ ++P+V++ IGP+I+DGFYYD   E PF+ + +A IE
Sbjct: 62  PRDDDGVDIIRHSCAHLLGHAVKQLYPDVKMVIGPVIDDGFYYDIYSETPFTPEHMAAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M E+I +D   +K+     +  ++FE + E YK++++  +P +E   LY   E+ D+C
Sbjct: 122 KRMMELIKQDYDVIKKITPRAEVIKIFEERGEDYKLKLINDMPGEEAFGLYHHQEYVDMC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +T +  K FKL K++GAYWRGD+    L RIYGTAW  +++L  Y+  +EE+EK
Sbjct: 182 RGPHVPNT-RFLKVFKLTKMSGAYWRGDAKNEQLQRIYGTAWADKKDLKTYIQRIEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQ 302
           RDHRK+ + ++LFH+ E   G++FWH  GW I+Q L  YMR+  +D+ YEEI TPQ++D+
Sbjct: 241 RDHRKIGKALNLFHMQEQAPGMVFWHANGWTIYQVLEQYMRKVQQDNGYEEIKTPQIVDR 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHW +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYR+LP+R+
Sbjct: 301 SLWERSGHWGNYATNMFT------TSSEKRDYAVKPMNCPCHVQVFNQGLKSYRDLPLRM 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+ Q+  E      L +++Y+DFGF  
Sbjct: 355 AEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTQSQIQQEVADFIKLTLAVYEDFGFNN 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I++KLSTRPEKRVGSD  WD AE   K + D + NS  D      L GEGAFYGPK E+ 
Sbjct: 415 IIMKLSTRPEKRVGSDESWDFAE---KALADALDNSGLD---WAYLPGEGAFYGPKIEFS 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LKD++GR WQCGTIQVD N+P R +A +VN  +E+  P+M+HRA+ GS ERFIGI+IEN+
Sbjct: 469 LKDSLGRVWQCGTIQVDPNMPERLDAEFVNEQNEREVPIMLHRAILGSFERFIGILIENY 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G +P+WL+P Q +V  IT    E  + + N LK   L   +D RNE I +KIRE ++++
Sbjct: 529 AGWMPVWLAPQQVVVMNITDKQAEACENVVNELKKSGLRAISDLRNEKIGFKIREKTLER 588

Query: 603 IPIIIICGDKEASERSIGIR 622
           IP +++ GDKE    S+ +R
Sbjct: 589 IPYMLVLGDKEVESGSVNVR 608


>gi|253998429|ref|YP_003050492.1| threonyl-tRNA synthetase [Methylovorus sp. SIP3-4]
 gi|313200504|ref|YP_004039162.1| threonyl-tRNA synthetase [Methylovorus sp. MP688]
 gi|253985108|gb|ACT49965.1| threonyl-tRNA synthetase [Methylovorus sp. SIP3-4]
 gi|312439820|gb|ADQ83926.1| threonyl-tRNA synthetase [Methylovorus sp. MP688]
          Length = 640

 Score =  664 bits (1712), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 316/623 (50%), Positives = 435/623 (69%), Gaps = 20/623 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVA--VAING---KVCDLSDPVREG-SIE 60
           +  PDGS + F    T + VA+SI   LA+ A+A  V + G   ++ D S  + E   + 
Sbjct: 4   IRLPDGSERQFDAPLTVAAVAQSIGAGLARAALAGKVTLPGQEPRLVDTSFEIAEDVDLA 63

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           IIT +D   L VIRHS AH++A AV+ ++PE QV IGP+I++GFYYDF  ++PF+ ++L 
Sbjct: 64  IITDKDADGLEVIRHSTAHLLAYAVKELFPEAQVTIGPVIDNGFYYDFSYKRPFTPEDLE 123

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEKKM E+  +D    ++ L  ++A   F+S  EAYK EI+ SIPA ++V+LY +G + 
Sbjct: 124 AIEKKMAELAKKDEQVTRKVLPRDEAVAYFQSIGEAYKAEIIASIPADQDVSLYTEGNFT 183

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV STG++K F KLMKVAGAYWRGDSN  ML RIYGTAW  +++L  YL+ LEE
Sbjct: 184 DLCRGPHVPSTGKLKAF-KLMKVAGAYWRGDSNNEMLQRIYGTAWAKKEDLEAYLHMLEE 242

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQV 299
           +EKRDHRKL +++D FH+ ++  G++FWH +GW ++Q +  YMR   +   Y+E+ TP +
Sbjct: 243 AEKRDHRKLGKQLDYFHMQDEAPGMVFWHPRGWNLWQEVEQYMRGLFRQYGYQEVKTPTI 302

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           +D+ LW++SGHW +YR NMF       T  + R +A+KPMNCPGH+ +FN GL SYR+LP
Sbjct: 303 MDRSLWEKSGHWQNYRENMFT------TSSENRDYAVKPMNCPGHIQIFNSGLHSYRDLP 356

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +RLAEFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT++Q+  E      ++   YKDFG
Sbjct: 357 LRLAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEDQVKQEVADFIVMLYQAYKDFG 416

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F  ++VKLSTRPEKRVGSD  WD AE  +   L       ++ +   +  GEGAFYGPK 
Sbjct: 417 FNDVLVKLSTRPEKRVGSDETWDKAEASLAAAL------RENNLAFDLQPGEGAFYGPKI 470

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           E+ LKD++GR WQCGTIQ+DFNLP R  A YV   + + HPVM+HRA+ GS+ERF+GI+I
Sbjct: 471 EFTLKDSLGRLWQCGTIQLDFNLPERLGAEYVAEDNTRKHPVMLHRAIVGSMERFLGILI 530

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           EN+ G +P WL+P+QA+V  IT S   Y QE+   L+ +   +++D RNE I YKIREHS
Sbjct: 531 ENYAGAMPTWLAPVQAMVLNITDSQSAYVQEVVAELRKNGFRVDSDLRNEKITYKIREHS 590

Query: 600 IKKIPIIIICGDKEASERSIGIR 622
           ++K+P +++ GD+E     + +R
Sbjct: 591 LQKLPYLLVAGDREMQSGQVAVR 613


>gi|93007241|ref|YP_581678.1| threonyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
 gi|123264359|sp|Q1Q809|SYT_PSYCK RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|92394919|gb|ABE76194.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Psychrobacter
           cryohalolentis K5]
          Length = 644

 Score =  664 bits (1712), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 306/620 (49%), Positives = 430/620 (69%), Gaps = 15/620 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           + +T PDGS+KNF  + T  +VA+SI   LAK  VA  ++G++ D  DP+  +  +EI+T
Sbjct: 2   VAITLPDGSVKNFEGNTTVMEVAQSIGTGLAKATVAGRVDGQLVDAHDPIAHDAKVEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+D   + +IRHSCAH++  AV+ ++P+V++ IGP+I+DGFYYD   E PF+ + +A IE
Sbjct: 62  PKDDDGVDIIRHSCAHLLGHAVKQLYPDVKMVIGPVIDDGFYYDIYSETPFTPEHMAAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M E+I +D   +K+     +   +FE + E YK++++  +P +E   LY   E+ D+C
Sbjct: 122 KRMMELIKQDYDVIKKITPRAEVIRIFEERGEEYKLKLINDMPGEEAFGLYHHQEYVDMC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +T +  K FKL K++GAYWRGD+    L RIYGTAW  +++L  Y+  +EE+EK
Sbjct: 182 RGPHVPNT-RFLKVFKLTKMSGAYWRGDAKNEQLQRIYGTAWADKKDLKAYIQRIEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQ 302
           RDHRK+ + ++LFH+ E   G++FWH  GW I+Q L  YMR+   D+ YEEI TPQ++D+
Sbjct: 241 RDHRKIGKALNLFHMQEQAPGMVFWHANGWTIYQVLEQYMRKVQHDNGYEEIKTPQIVDR 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHW +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYR+LP+R+
Sbjct: 301 SLWERSGHWGNYATNMFT------TSSENRDYAVKPMNCPCHVQVFNQGLKSYRDLPLRM 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+ Q+  E      L +++Y+DFGF+K
Sbjct: 355 AEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTQSQIQQEVADFIKLTLAVYEDFGFDK 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I++KLSTRPEKRVGSD  WD AE  +   LD+        ++   L GEGAFYGPK E+ 
Sbjct: 415 IIMKLSTRPEKRVGSDESWDFAEKALADALDS------SGLDWAYLPGEGAFYGPKIEFS 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LKD++GR WQCGTIQVD N+P R +A +VN  +E+  P+M+HRA+ GS ERFIGI+IEN+
Sbjct: 469 LKDSLGRVWQCGTIQVDPNMPERLDAEFVNEQNEREVPIMLHRAILGSFERFIGILIENY 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G +P+WL+P Q +V  IT    +  + + N LK   L   +D RNE I +KIRE ++++
Sbjct: 529 AGWMPVWLAPQQVVVMNITDKQADACENVVNELKKAGLRAISDLRNEKIGFKIREKTLER 588

Query: 603 IPIIIICGDKEASERSIGIR 622
           IP +++ GDKE    SI +R
Sbjct: 589 IPYMLVLGDKEVESGSINVR 608


>gi|42520791|ref|NP_966706.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           melanogaster]
 gi|73919843|sp|Q73GH6|SYT_WOLPM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|42410531|gb|AAS14640.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           melanogaster]
          Length = 633

 Score =  664 bits (1712), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 315/642 (49%), Positives = 444/642 (69%), Gaps = 18/642 (2%)

Query: 5   IKLTFP-DGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           +++TF  +  +K +    TG D+ +       K+ VA+ +NG++ DLS  +  +  IE+I
Sbjct: 2   VRVTFSTEQKVKEYSGKVTGFDILQP---DALKEVVALKVNGELYDLSREIEADAEIEVI 58

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
              D   L +IRH  AHIMA+AV+ ++P  Q+ IGP I+DGFYYDF  ++ F++D+L  I
Sbjct: 59  QLSDEVGLDIIRHDAAHIMAQAVKELFPNTQITIGPTIQDGFYYDFATDRTFTTDDLTAI 118

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EKKM+EI+  +  F+++  + +++ + F    E YKV+I+ SIP  EN+T+YRQG++ DL
Sbjct: 119 EKKMKEIVKSNHRFVREVWTRKQSVDFFSGIGEKYKVDIISSIPEGENLTVYRQGDFVDL 178

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH  STG+VK F KLMKVAGAYWRGDS  PML RIYGTAW  + EL  YL  L+E+E
Sbjct: 179 CRGPHSPSTGRVKAF-KLMKVAGAYWRGDSKGPMLQRIYGTAWGNKDELNAYLECLKEAE 237

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLD 301
           KRDHRK+A++MDLFHI E+  G +FWH +G+ ++  L SY+R+K I + Y E+ TP ++ 
Sbjct: 238 KRDHRKIAKDMDLFHIQEEAVGQVFWHEQGYILYNVLESYIRKKLINNGYFEVKTPILVS 297

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW++SGHWD +R NMF V  +++     +  A+KPMNCP HV +FN   +SYR+LP+R
Sbjct: 298 KELWERSGHWDKFRENMFIVDESEN-----KKLAIKPMNCPCHVQIFNSHTRSYRDLPIR 352

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AEFG+ +RNE SGSLHGLMRVRGFTQDDAH+FC +EQ+ +E +K  +L+  +Y + GF 
Sbjct: 353 MAEFGTCHRNESSGSLHGLMRVRGFTQDDAHIFCMEEQVNSETIKFCDLLKEVYSELGFN 412

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
           +I VK S RP+ R G+D +WD AE   K +L+ +K +    ++  +  GEGAFYGPK E+
Sbjct: 413 EISVKFSDRPDIRAGNDEVWDRAE---KALLEAVKEAG---LSYKLNPGEGAFYGPKLEF 466

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
           +LKDAIGR+WQCGT+QVDF LP R  AFY+ +   K HPVM+HRA+ G+ ERFIGI+IEN
Sbjct: 467 VLKDAIGRNWQCGTLQVDFILPERLGAFYIGADGHKHHPVMLHRAILGTFERFIGILIEN 526

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  P+WL+P Q  + TIT+ A  YA EI+N+LK   + ++TD  NE I+YKIR HS  
Sbjct: 527 YAGKFPVWLAPTQLAILTITNEADGYATEISNILKEQGVRVKTDLTNEKISYKIRLHSSN 586

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           K+PI+ I G  E + +++ +R  GS   +  SL  A   L K
Sbjct: 587 KVPILWIVGKNEVTSKTVSVRNLGSERQESFSLEKANESLLK 628


>gi|297538938|ref|YP_003674707.1| threonyl-tRNA synthetase [Methylotenera sp. 301]
 gi|297258285|gb|ADI30130.1| threonyl-tRNA synthetase [Methylotenera sp. 301]
          Length = 635

 Score =  664 bits (1712), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 315/636 (49%), Positives = 444/636 (69%), Gaps = 21/636 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +  PDGS ++F    T +DVA +I   LAK A+A  +NG + D S  + ++  + IIT +
Sbjct: 4   IRLPDGSERSFDAPVTVADVAMNIGAGLAKAALAGKVNGVLVDTSHLISQDAELAIITDK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           +P  + VIRHS AH++A AV+ ++P+ QV IGP+IE+GF+YDF  ++ F+ ++L  IEKK
Sbjct: 64  NPEGVDVIRHSTAHLLAYAVKELFPDAQVTIGPVIENGFFYDFSYKRAFTPEDLIAIEKK 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M E+  +D    ++ L  ++A + F+S  E YK EI+ SIPA E+V+LY +G + DLCRG
Sbjct: 124 MVELAKKDEQVTRKVLPRDEAVDYFKSIGEHYKAEIIASIPAGEDVSLYTEGNFTDLCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +TG++K F KLMK+AGAYWRGDSN  ML R+YGTAW  ++EL  YL+ LEE+EKRD
Sbjct: 184 PHVPNTGKLKAF-KLMKLAGAYWRGDSNNEMLQRVYGTAWRNKEELEAYLFQLEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHL 304
           HRKL +++D FH+ +D  G++FWH +GW I+Q +  YMR+  +D +Y+E+ TP ++D+ L
Sbjct: 243 HRKLGKQLDYFHMQDDAPGMVFWHPRGWSIWQEVEQYMRKMFRDYNYQEVRTPTIMDRTL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHW +YR  MF       T  + R +A+KPMNCPGHV +FN  L SYR+LP+RLAE
Sbjct: 303 WEKSGHWQNYREGMFV------TSSESRDYAVKPMNCPGHVQIFNSSLHSYRDLPLRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+  E      ++   Y DFGF  ++
Sbjct: 357 FGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQVEAEVADFIKMLYKAYGDFGFNDVL 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           VKLSTRPEKR+G+DA WD AE  +   L        + ++     GEGAFYGPK E+ LK
Sbjct: 417 VKLSTRPEKRIGTDADWDKAETSLANALKL------NNLDFEYQPGEGAFYGPKIEFTLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D++GR WQCGTIQ+D NLP R  A YV   + + HPVM+HRA+ GS+ERFIGI+IEN+ G
Sbjct: 471 DSLGRLWQCGTIQLDPNLPERLGAEYVAEDNSRKHPVMLHRAIVGSMERFIGILIENYAG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
            +PLWL+P+Q +V  I+ +  +Y +++  +LK + +  E D RNE I YKIREHS++K+P
Sbjct: 531 AMPLWLAPVQVMVLNISENQADYVRQVVEMLKKNGIRCEFDLRNEKITYKIREHSMQKMP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
            +++ G++E     + +R      T+K   L ++PI
Sbjct: 591 YLLVAGEREMQTGHVAVR------TRKGEDLGSMPI 620


>gi|56551661|ref|YP_162500.1| threonyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4]
 gi|260752754|ref|YP_003225647.1| threonyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
 gi|73919847|sp|Q5NPH1|SYT_ZYMMO RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|56543235|gb|AAV89389.1| threonyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4]
 gi|258552117|gb|ACV75063.1| threonyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
          Length = 659

 Score =  663 bits (1711), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 317/664 (47%), Positives = 449/664 (67%), Gaps = 18/664 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSI 59
           M   I++T  D S +      T + +A SIS SLAKKA+A   NG++ DLS P+ E G +
Sbjct: 1   MAEKIRITLIDNSEREVLQGTTTTQIAASISTSLAKKALAARFNGQMIDLSQPLLEDGRL 60

Query: 60  EIITPED-PRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF-DKEQPFSSD 117
           EIIT E+   +L ++RH  AHI+AEAVQ ++P  Q+  GP+ +DGFYYDF  K++PF+ +
Sbjct: 61  EIITAENEAEALELVRHDYAHILAEAVQKLFPGTQITFGPVTDDGFYYDFAPKDRPFTEE 120

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +L  IE +M++IIA+++  +++    +K   L+ES+ E +K E  + +P  + +T+YR G
Sbjct: 121 DLPLIEAEMRKIIAQNNALVREVWERDKLISLWESQGEKFKAEWAKELPEGQELTIYRAG 180

Query: 178 EWFDLCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           EWFD+CRGPH+ STG++  K FKL +V+GAYWRGD N  MLSRIYGT W   ++L  +L 
Sbjct: 181 EWFDMCRGPHLPSTGKLDPKAFKLTRVSGAYWRGDQNNAMLSRIYGTGWLNAKQLKAHLE 240

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
            LEE++KRDHR+L +EMDLFH+ ++  G +FWH  G+ I+  L +Y+RR++K+ +Y+E+ 
Sbjct: 241 RLEEAQKRDHRRLGQEMDLFHLQQEAQGSVFWHPNGYTIWLQLEAYLRRRMKNANYKEVK 300

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVK---CADDTIKDLRT-----FALKPMNCPGHVAV 347
           TPQ++D  LW+ SGHW  +R NMF V     + D  K + +      ALKPMNCP H+ +
Sbjct: 301 TPQLMDAALWEASGHWGKFRENMFVVPDEIPSTDPDKPVLSGKGNLMALKPMNCPAHIQI 360

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
           F  G++SYRELP+R+ EFG  +RNE  G+LHGLMRVR  TQDDAH+FCT EQ+  E    
Sbjct: 361 FKQGIRSYRELPLRMLEFGCCHRNEAHGALHGLMRVRQLTQDDAHIFCTAEQIVTETKDF 420

Query: 408 HNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGV 467
            NL+ SIY+D GF    VKLS RPE R G D LWD+AEN ++  L+ +  +  +      
Sbjct: 421 VNLLDSIYRDLGFTSYAVKLSLRPELRAGDDELWDNAENGLRSALEQVGITDYEE----- 475

Query: 468 LLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAV 527
           L GEGAFYGPK E+ L DAIGR WQCGT+Q+D+ LP R +A YV     +  PVM+HRA+
Sbjct: 476 LPGEGAFYGPKLEFHLTDAIGRTWQCGTLQLDYVLPERLDASYVAEDGSRKRPVMLHRAI 535

Query: 528 FGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR 587
            G+ ERFIGI+IE+  G  PLW++P+QA+V TI S A  +A+ +   +K+  L + +D R
Sbjct: 536 IGTFERFIGILIEHHAGRFPLWMAPVQAVVATIVSEADSFAESVVEKMKAAGLRVVSDIR 595

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLP 647
           NE INYKIREHS+ K+P I++ G +EA E  + IR+ GS     +S+ +AI +L +E+ P
Sbjct: 596 NEKINYKIREHSLTKVPNILVVGKREAEEGKVAIRKLGSRDQIILSVDEAIALLLEEATP 655

Query: 648 PDCQ 651
           PD +
Sbjct: 656 PDLK 659


>gi|119897370|ref|YP_932583.1| threonyl-tRNA synthetase [Azoarcus sp. BH72]
 gi|166223320|sp|A1K4E1|SYT_AZOSB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|119669783|emb|CAL93696.1| ThrS protein [Azoarcus sp. BH72]
          Length = 638

 Score =  663 bits (1710), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 320/636 (50%), Positives = 435/636 (68%), Gaps = 18/636 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP +IKL  PDGS+++F    T ++VA SI   LAK A+A  ++GK  DLS  + R+  +
Sbjct: 1   MP-NIKL--PDGSVRSFDHPVTVAEVAASIGSGLAKAALAGRVDGKAVDLSYCIERDSEL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            I+T +    + VIRHS AH++A AV+ ++PE QV IGP+IE+GFYYDF  ++PF+ ++L
Sbjct: 58  AILTDKSAEGVDVIRHSTAHLLAHAVKELFPEAQVTIGPVIENGFYYDFSYKRPFTPEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEK+M E++ R+ P  ++    +KA   F+S  E YK EI+ SIPA E+V+LYRQGE+
Sbjct: 118 EAIEKRMAELVKRELPVEREVWPRDKAVAFFKSIGEHYKAEIIASIPANEDVSLYRQGEF 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV STG++K  FKL K+AGAYWRGD+   ML R+YGTAW  +++L  YL+ LE
Sbjct: 178 VDLCRGPHVPSTGRLK-VFKLTKLAGAYWRGDAKNEMLQRVYGTAWAKKEDLESYLHMLE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+EKRDHRKL R++DLFHI E+  G++FWH KGW ++Q +  Y+R  I +  Y+E+ TPQ
Sbjct: 237 EAEKRDHRKLGRQLDLFHIQEEAPGMVFWHAKGWTLWQQVEQYLRGTISRHGYQEVRTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D+ LW++SGHW  Y   MF       T  +   +A+KPMNCP H+ +FN GLKSYR+L
Sbjct: 297 IVDRSLWEKSGHWGMYSDLMFT------TQSEKHDYAVKPMNCPCHIQIFNQGLKSYRDL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFGS +RNEPSGSLHG+MRVR F QDDAH+FCT EQ+  E      L+  +Y DF
Sbjct: 351 PLRMAEFGSCHRNEPSGSLHGIMRVRNFVQDDAHIFCTDEQVQEEAAAFIALLQKVYADF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF  I +KLSTRPEKRVG+D  WD AE  +              +   +  GEGAFYGPK
Sbjct: 411 GFRDIQIKLSTRPEKRVGADEQWDAAEAALA------AALKAQGLEYELQPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD + R WQCGT+Q+DFNLP R  A YV   + K  PVM+HRA+ GS+ERFIGI+
Sbjct: 465 IEFSLKDCLNRVWQCGTLQLDFNLPVRLGAEYVAEDNTKKFPVMLHRAIVGSLERFIGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE++ G +PLWL+P+ A+V  I+    +YA E+ N L+     +E D RNE INYKIREH
Sbjct: 525 IEHYAGAMPLWLAPVHAVVMNISEGQADYATEVVNRLREAGFRVEADLRNEKINYKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           S+ K+P  ++ G+KE +   + +R  G     ++SL
Sbjct: 585 SVHKLPYQLVVGEKEKAAGVVAVRVRGGQDLGQLSL 620


>gi|241761215|ref|ZP_04759303.1| threonyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC
           10988]
 gi|241374122|gb|EER63619.1| threonyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC
           10988]
          Length = 659

 Score =  663 bits (1710), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 317/664 (47%), Positives = 449/664 (67%), Gaps = 18/664 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSI 59
           M   I++T  D S +      T + +A SIS SLAKKA+A   NG++ DLS P+ E G +
Sbjct: 1   MAEKIRITLIDNSEREVLQGTTTTQIAASISTSLAKKALAARFNGQMIDLSQPLLEDGRL 60

Query: 60  EIITPED-PRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF-DKEQPFSSD 117
           EIIT E+   +L ++RH  AHI+AEAVQ ++P  Q+  GP+ +DGFYYDF  K++PF+ +
Sbjct: 61  EIITAENEAEALELVRHDYAHILAEAVQKLFPGTQITFGPVTDDGFYYDFAPKDRPFTEE 120

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +L  IE +M++IIA+++  +++    +K   L+ES+ E +K E  + +P  + +T+YR G
Sbjct: 121 DLPLIEAEMRKIIAQNNALVREVWERDKLISLWESQGEKFKAEWAKELPEGQELTIYRAG 180

Query: 178 EWFDLCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           EWFD+CRGPH+ STG++  K FKL +V+GAYWRGD N  MLSRIYGT W   ++L  +L 
Sbjct: 181 EWFDMCRGPHLPSTGKLDPKAFKLTRVSGAYWRGDQNNAMLSRIYGTGWLNAKQLKVHLE 240

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
            LEE++KRDHR+L +EMDLFH+ ++  G +FWH  G+ I+  L +Y+RR++K+ +Y+E+ 
Sbjct: 241 RLEEAQKRDHRRLGQEMDLFHLQQEAQGSVFWHPNGYTIWLQLEAYLRRRMKNANYKEVK 300

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVK---CADDTIKDLRT-----FALKPMNCPGHVAV 347
           TPQ++D  LW+ SGHW  +R NMF V     + D  K + +      ALKPMNCP H+ +
Sbjct: 301 TPQLMDAALWEASGHWGKFRENMFVVPDEIPSTDPDKPVLSGKGNLMALKPMNCPAHIQI 360

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
           F  G++SYRELP+R+ EFG  +RNE  G+LHGLMRVR  TQDDAH+FCT EQ+  E    
Sbjct: 361 FKQGIRSYRELPLRMLEFGCCHRNEAHGALHGLMRVRQLTQDDAHIFCTAEQIVTETKDF 420

Query: 408 HNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGV 467
            NL+ SIY+D GF    VKLS RPE R G D LWD+AEN ++  L+ +  +  +      
Sbjct: 421 VNLLDSIYRDLGFTSYAVKLSLRPELRAGDDELWDNAENGLRSALEQVGITDYEE----- 475

Query: 468 LLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAV 527
           L GEGAFYGPK E+ L DAIGR WQCGT+Q+D+ LP R +A YV     +  PVM+HRA+
Sbjct: 476 LPGEGAFYGPKLEFHLTDAIGRTWQCGTLQLDYVLPERLDASYVAEDGSRKRPVMLHRAI 535

Query: 528 FGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR 587
            G+ ERFIGI+IE+  G  PLW++P+QA+V TI S A  +A+ +   +K+  L + +D R
Sbjct: 536 IGTFERFIGILIEHHAGRFPLWMAPVQAVVATIVSEADSFAESVVEKMKAAGLRVVSDIR 595

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLP 647
           NE INYKIREHS+ K+P I++ G +EA E  + IR+ GS     +S+ +AI +L +E+ P
Sbjct: 596 NEKINYKIREHSLTKVPNILVVGKREAEEGKVAIRKLGSRDQIILSVDEAIALLLEEATP 655

Query: 648 PDCQ 651
           PD +
Sbjct: 656 PDLK 659


>gi|329118120|ref|ZP_08246832.1| threonine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
 gi|327465780|gb|EGF12053.1| threonine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
          Length = 640

 Score =  663 bits (1710), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 300/621 (48%), Positives = 428/621 (68%), Gaps = 15/621 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           + +T PDGS++ +    T + +A SI   LAK  VA  +NG++ D  DP+ E S ++IIT
Sbjct: 8   LNITLPDGSVRQYEAPVTVAQIAASIGAGLAKATVAGKVNGRLVDACDPITEDSTVQIIT 67

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+D   + +IRHSCAH++  AV+ ++P+ ++ IGP+IEDGFYYD   E+PF+ +++A IE
Sbjct: 68  PKDKEGVEIIRHSCAHLVGHAVKQLYPDAKMVIGPVIEDGFYYDIATEKPFTPEDVAAIE 127

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M+E+I +D   +K      +  + F+ + E YK+ ++E +P  E + LY   E+ D+C
Sbjct: 128 ARMKELINQDYDVVKVMTPRAETIKTFQDRGEEYKLRLIEDMPEVEAMGLYHHQEYVDMC 187

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW ++ EL  Y+  +EE+EK
Sbjct: 188 RGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWASKDELKAYIQRIEEAEK 246

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ E+  G++FWH +GW ++Q +  +MR+++    Y E+ TPQ++D+
Sbjct: 247 RDHRKLGKQLDLFHLQEEAPGMVFWHPRGWALWQAIEQHMRKELDAAGYREVKTPQIMDK 306

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             W++SGHWD+Y+ NMF       T  + R +A+KPMNCPGHV +FN+ L+SYR+LP+RL
Sbjct: 307 TFWERSGHWDNYKDNMFV------TQSEKREYAVKPMNCPGHVQIFNNSLRSYRDLPMRL 360

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+  E  + + L++ IYK FGF  
Sbjct: 361 AEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVEEARRFNELLVRIYKQFGFHD 420

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + VKLS RPEKR GSD +WD AE  ++  L       ++      L GEGAFYGPK EY 
Sbjct: 421 VAVKLSLRPEKRAGSDDIWDKAEQGLRDALTACGVEWEE------LPGEGAFYGPKIEYH 474

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDAIGR WQCGT+Q+DF LP R +A YV   + +  PVM+HRA+ GS+ERFIGI+IEN 
Sbjct: 475 VKDAIGRSWQCGTLQLDFVLPERLDAEYVTESNGRARPVMLHRAILGSLERFIGILIENH 534

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G+ PLWL+P+Q +V  IT    +Y +++   L++    +E D RNE I YKIR++S  +
Sbjct: 535 AGSFPLWLAPVQMVVMNITEHQADYCRKVVEKLRAEGFRVELDLRNEKIGYKIRDNSQYR 594

Query: 603 IPIIIICGDKEASERSIGIRR 623
            P  I+ GDKE     + +RR
Sbjct: 595 FPYQIVVGDKEKENGQVAVRR 615


>gi|254785570|ref|YP_003072999.1| threonyl-tRNA synthetase [Teredinibacter turnerae T7901]
 gi|259516754|sp|C5BSQ1|SYT_TERTT RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|237684404|gb|ACR11668.1| threonine--tRNA ligase [Teredinibacter turnerae T7901]
          Length = 637

 Score =  663 bits (1710), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 306/618 (49%), Positives = 435/618 (70%), Gaps = 15/618 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T P+GS + F    T  DVA  I   LAK  +A  ++GK  D    + ++ ++ I+T +
Sbjct: 4   ITLPNGSKREFSNPITVLDVAADIGPGLAKATLAGIVDGKEVDAGFTIEQDAALSIVTEK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
            P  L VIRHS AH++A+AV+S++PE QV IGP+I+DGFYYDF   + F+ ++LA IEKK
Sbjct: 64  SPEGLEVIRHSTAHLLAQAVKSLFPEAQVTIGPVIDDGFYYDFAYSRAFTPEDLAAIEKK 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M E+  +D P  ++ L  ++A   F    E YK EI+ESIPA E+++LY+QG++ DLCRG
Sbjct: 124 MTELSEQDIPVSRRVLPRDEAVAFFRGIGEDYKAEIIESIPANEDLSLYKQGDFEDLCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV STG++K +FKLMKVAGAYWRGD+   ML RIYGTAW  +++L  YL+ LEE+EKRD
Sbjct: 184 PHVPSTGKLK-YFKLMKVAGAYWRGDAKNEMLQRIYGTAWANKKDLKAYLHRLEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHL 304
           HRKL ++ DLFH+ E+  G++FWH KGW ++  +  YMR+  +++ Y+EI TPQV+D+ L
Sbjct: 243 HRKLGKKFDLFHLQEEAPGMVFWHPKGWSVYTAIEQYMRKVQRENGYKEIKTPQVVDRSL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHWD +R  MF V+       + R +A+KPMNCP H+ VFN GLKSYR+LP+R AE
Sbjct: 303 WERSGHWDKFRDGMFTVES------ESRDYAVKPMNCPCHIQVFNQGLKSYRDLPLRFAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNE SG+L G+MRVR FTQDD H+FC ++ + +E     +L+  +Y+DFGFE ++
Sbjct: 357 FGSCHRNEASGTLQGIMRVRAFTQDDGHIFCAEDAIQSEVSIFTDLLYEVYRDFGFEDVI 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           ++LSTRPE+RVGS+ +WD +E  +   L+    + +       L GEGAFYGPK E+ LK
Sbjct: 417 IRLSTRPEQRVGSEEVWDKSEKALADALNAKGLAFE------YLPGEGAFYGPKIEFSLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D IGR WQCGTIQVDF++P+R +A +V     +  PVM+HRA+ GS ERFIGI+IEN++G
Sbjct: 471 DCIGRVWQCGTIQVDFSMPARLDAQFVAEDGSRQVPVMLHRAILGSFERFIGILIENYEG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P WL+P Q +V  IT +  EYA+++ N L++    + +D RNE I +KIREH+I+K+P
Sbjct: 531 AFPPWLAPEQVVVMNITDNQAEYAEKVRNSLQNEGFRVVSDLRNEKIGFKIREHTIQKVP 590

Query: 605 IIIICGDKEASERSIGIR 622
            +++ GD+E    S+ +R
Sbjct: 591 YLLVVGDQEMENNSVAVR 608


>gi|304309881|ref|YP_003809479.1| Threonyl-tRNA synthetase [gamma proteobacterium HdN1]
 gi|301795614|emb|CBL43813.1| Threonyl-tRNA synthetase [gamma proteobacterium HdN1]
          Length = 647

 Score =  663 bits (1710), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 306/632 (48%), Positives = 433/632 (68%), Gaps = 14/632 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           I +T PDGS++ F    +G ++A SI   LAK ++A+ ++G+  DLS  +     +  IT
Sbjct: 13  IAITLPDGSVRQFERPVSGLEIAASIGPGLAKASIAMTVDGEQQDLSRVIDHNVQLAFIT 72

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            + P +L ++RH  AH+MA+AV+ ++PE QV IGP IE+G+YYDF +   F+ ++L +IE
Sbjct: 73  RDKPEALEILRHDAAHVMAQAVKELYPETQVTIGPAIENGYYYDFCRATSFTPEDLEKIE 132

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M EI+ RD+P +++     +A   FE + E +K EI+  +P  E +TLYRQGE+ DLC
Sbjct: 133 ARMMEIVDRDTPIVREVWDRNEAIAFFEKQGELFKAEIIRDLPENETITLYRQGEFIDLC 192

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG++ K FKL K+AGAYWR DS +  L RIYGTAW   +EL  +L  LEE+ K
Sbjct: 193 RGPHLPSTGKLGKGFKLTKLAGAYWRADSTKQQLQRIYGTAWRDVKELKAHLTLLEEAAK 252

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQ 302
           RDHR++ +++DLFH  E+  G++FWH KGW I+Q +  Y+R+  ++  Y+E+  PQ+LD 
Sbjct: 253 RDHRRIGKDLDLFHQQEEAPGMVFWHPKGWAIWQKVEQYVRKVYRESGYQEVRGPQILDV 312

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHW++Y+ NMF       T  + RT+A+KPMNCPGHV ++N+ L SYRELP+R 
Sbjct: 313 SLWKKSGHWENYQENMFF------TESEKRTYAVKPMNCPGHVQIYNNTLHSYRELPIRY 366

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFG  +RNEPSG+LHG+MRVR FTQDD H+FCT++Q+  E    H   + +Y DFGFE 
Sbjct: 367 AEFGGCHRNEPSGALHGIMRVRAFTQDDGHIFCTEDQVQAEVTAFHRQAMKVYADFGFEN 426

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I VKL+ RP+KR+G++  WD AEN ++  L     + ++      L GEGAFYGPK EY 
Sbjct: 427 ISVKLALRPDKRIGTEDAWDKAENGLRAALAAAGVAWEE------LPGEGAFYGPKIEYH 480

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LKD+IGR WQ GTIQ D  +P R NA YV+ +S++  P+M+HRA+ GS+ERFIG++IE+F
Sbjct: 481 LKDSIGRAWQMGTIQFDPMMPERLNAEYVDENSQRQRPIMLHRAIVGSMERFIGVLIEHF 540

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            GN PLWLSP+  +V TIT  A ++A+ +   LK+  +  E D RNE I YK+REHS  K
Sbjct: 541 AGNFPLWLSPVPVVVATITDDARDWAETVVAQLKAAGIQAEADLRNEKIGYKVREHSNAK 600

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           IP I + G +EA+E+ + IRR GS   + V  
Sbjct: 601 IPQIWVVGKQEAAEQKVAIRRLGSQQNEVVGF 632


>gi|226941673|ref|YP_002796747.1| threonyl-tRNA synthetase [Laribacter hongkongensis HLHK9]
 gi|254783525|sp|C1DDA6|SYT_LARHH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|226716600|gb|ACO75738.1| Syt [Laribacter hongkongensis HLHK9]
          Length = 633

 Score =  663 bits (1710), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/648 (50%), Positives = 445/648 (68%), Gaps = 18/648 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP+   +  PDGS++ F    +  DVA SI   LA+ A+A  ++G + D S  +  +  +
Sbjct: 1   MPA---IRLPDGSVRQFENPVSVHDVAASIGAGLARAALAGRVDGALVDTSFVIDHDVDL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            I+T +D   L ++RHS AH++A AV+ ++PE QV IGP IE+GFYYDF  ++PF+ ++L
Sbjct: 58  AIVTDKDADGLGILRHSTAHLLACAVKELFPEAQVTIGPEIENGFYYDFSYKRPFTPEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM E+  +D P  +  L  ++A   F+S  EAYK EI+ESIP  E ++LYR+G +
Sbjct: 118 VAIEKKMAELAKKDIPVERYELPRDEAIAYFKSIGEAYKAEIIESIPQGEVLSLYREGNF 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV STG++K  FKLMKVAGAYWRGDS   ML RIYGTAW  +++L  YL+ LE
Sbjct: 178 TDLCRGPHVPSTGKLK-VFKLMKVAGAYWRGDSKNEMLQRIYGTAWAKKEDLEAYLHMLE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQ 298
           E+EKRDHRKL R++DLFHI ++  G++FWH KGW ++Q +  YMRR  I +DY+E+ TPQ
Sbjct: 237 EAEKRDHRKLGRQLDLFHIQDEAPGMVFWHPKGWTLWQQVEQYMRRVLIANDYQEVRTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D+ LW++SGHW  Y+  MF       T  + R +A+KPMNCP H+ +FN GLKSYR+L
Sbjct: 297 IVDRSLWEKSGHWAMYQDLMFT------TESEKRDYAVKPMNCPCHIQIFNQGLKSYRDL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFGS +RNEPSGSLHG+MRVR F QDDAH+FCT+ QM  E     +L+ ++Y+DF
Sbjct: 351 PLRMAEFGSCHRNEPSGSLHGIMRVRNFVQDDAHIFCTEAQMQPETAAFIDLLQAVYQDF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+ I++KLSTRPEKRVG+D LWD AE  +   L     + +      +  GEGAFYGPK
Sbjct: 411 GFDNILIKLSTRPEKRVGADELWDQAEAALAAALAAKGLAYE------LQPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD +GR WQCGT+Q+DFNLP R  A YV+  + K HPVM+HRA+ GS+ERFIGI+
Sbjct: 465 IEFSLKDCLGRVWQCGTLQLDFNLPVRLGAEYVSEDNAKKHPVMLHRAILGSLERFIGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+  G +PLWL+P+Q  V  IT +  EYA E+A  LK     ++ D RNE I+YKIREH
Sbjct: 525 IEHHAGAMPLWLAPVQMAVLNITEAQAEYATEVAETLKKQGFRVDLDLRNEKISYKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           S++K+P  II GDKE +   + +R        ++ L   I  L  E L
Sbjct: 585 SLQKLPYQIIVGDKEKAGALVAVRARTGEDLGQIPLSQFIERLKSELL 632


>gi|56475898|ref|YP_157487.1| threonyl-tRNA synthetase [Aromatoleum aromaticum EbN1]
 gi|73919766|sp|Q5P7X5|SYT_AZOSE RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|56311941|emb|CAI06586.1| threonyl-tRNA synthetase [Aromatoleum aromaticum EbN1]
          Length = 638

 Score =  663 bits (1710), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 324/636 (50%), Positives = 438/636 (68%), Gaps = 18/636 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
           MP+   +T PDGS+++F    T S+VA SI   LAK A+A  ++G++ DLS  +   + +
Sbjct: 1   MPN---ITLPDGSVRSFDHPVTVSEVASSIGAGLAKAALAGKVDGRLVDLSYRIEADTPL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            I+T +    L VIRHS AH++A AV+ ++PE QV IGP+IE+GFYYDF  ++PF+ ++L
Sbjct: 58  AIVTEKGDEGLDVIRHSTAHLLAHAVKELFPEAQVTIGPVIENGFYYDFAYKRPFTPEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IEK+M E+  R+ P  ++    +KA E F+S+ E YK EI+ SIP  E+V+LYRQG++
Sbjct: 118 EKIEKRMAELARREIPVSREVWPRDKAVEFFKSQGEHYKAEIIASIPQAEDVSLYRQGDF 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV STG++K  FKL KVAGAYWRGDS   ML RIYGTAW  + +L  YL+ LE
Sbjct: 178 IDLCRGPHVPSTGKLK-VFKLTKVAGAYWRGDSKNEMLQRIYGTAWAKKDDLENYLHMLE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQ 298
           E+EKRDHRKL R +DLFHI E+  G++FWH KGW ++Q +  YMRR I D+ Y+E+ TPQ
Sbjct: 237 EAEKRDHRKLGRLLDLFHIQEEAPGMVFWHAKGWTLWQQVEQYMRRTILDNGYQEVKTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D+ LW++SGHWD Y   MF       T  + R +A+KPMNCP H+ +FN GLKSYR+L
Sbjct: 297 IVDRSLWEKSGHWDMYSELMFT------TQSEKRDYAVKPMNCPCHIQIFNQGLKSYRDL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFGS +RNEPSG+LHG+MRVR F QDDAH+FC  EQ+  E      L+  +Y DF
Sbjct: 351 PLRMAEFGSCHRNEPSGALHGIMRVRNFVQDDAHIFCADEQVQTEAAAFIELLQKVYADF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF +I++KLSTRP+KRVG+D  WD AE  +              +   +  GEGAFYGPK
Sbjct: 411 GFTEILIKLSTRPDKRVGTDDQWDAAEAALA------AALDAQGLAYDLQPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD + R WQCGT+Q+DFNLP R  A YV   + K +PVM+HRA+ GS+ERFIGI+
Sbjct: 465 IEFSLKDCLNRVWQCGTLQLDFNLPVRLGAEYVAEDNAKHYPVMLHRAILGSLERFIGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE++ G LPLWL+P+ A+V  I+    +YA E+A  LK     +E D RNE INYKIREH
Sbjct: 525 IEHYAGALPLWLAPVHAVVLNISEGQTDYATEVARRLKQAGFRVEADLRNEKINYKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           S+ K+P  I+ G+KE +   + +R  G     ++ L
Sbjct: 585 SVHKLPYQIVIGEKEKAAGVVAVRARGGQDLGQMPL 620


>gi|124023562|ref|YP_001017869.1| threonyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303]
 gi|166225478|sp|A2CAU4|SYT_PROM3 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|123963848|gb|ABM78604.1| Threonyl-tRNA synthatase [Prochlorococcus marinus str. MIT 9303]
          Length = 640

 Score =  662 bits (1707), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 318/638 (49%), Positives = 433/638 (67%), Gaps = 21/638 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPE 65
           +T PDG+ K F    T  +VAES+   LAK A+A  +NG + D   P+ + S + IIT +
Sbjct: 4   ITLPDGNKKKFDQPVTIMEVAESLGPGLAKAAIAGRVNGVLLDTCIPIEKDSEVNIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   +  IRHS AH++  AV+ ++PE ++AIGP+IEDGFYYD   +QPF+  +L  IE +
Sbjct: 64  DQDGIETIRHSFAHLIGHAVKQLYPEAKMAIGPVIEDGFYYDIAYDQPFTPKDLEAIEAR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+E++  D     + +S E+A + FE + E YK+EI++ IP  E + LYR  E+ D+CRG
Sbjct: 124 MKELVKLDYDVNVEIVSREEAHKEFEKRCEPYKIEIVDEIPENEIIKLYRHQEYTDMCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +T  ++ F KLMKV+GAYWRGDSN+ ML RIYGTAW + +EL  YL  LEE+EKRD
Sbjct: 184 PHVPNTRHLRTF-KLMKVSGAYWRGDSNKTMLQRIYGTAWGSSKELKAYLKRLEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHL 304
           HR++A++M LFH  E+  G+IFWH KGW I+Q L  Y+R  +    Y+EI TPQV+D+ L
Sbjct: 243 HRRIAKQMSLFHTQEEAPGMIFWHAKGWAIYQVLEQYIRETLSLHAYQEIRTPQVVDRSL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHW+ ++ +MF       T  + R +A+KPMNCP HV +FN GLKSYR+LP+RLAE
Sbjct: 303 WEKSGHWEKFKDDMFT------TTSENREYAIKPMNCPCHVQIFNQGLKSYRDLPIRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS  RNEPSGSLHGLMRVR F QDDAH+FCT+ Q+  E  K  +L+  IY+ FGF+ ++
Sbjct: 357 FGSCLRNEPSGSLHGLMRVRNFVQDDAHIFCTELQVQEEVSKFIDLVFEIYRSFGFDSVL 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +KLSTRPEKRVGSD +WD +E  +   LD  K  + D     +L GEGAFYGPK E+ LK
Sbjct: 417 IKLSTRPEKRVGSDEIWDKSEKALSDALDA-KGLAWD-----LLPGEGAFYGPKIEFSLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D +GR WQCGTIQVDF++P R  A YV   S++  PVM+HRA+ GS ERFIGI+IE++ G
Sbjct: 471 DCLGRVWQCGTIQVDFSMPERLGASYVAEDSQRRTPVMLHRAILGSFERFIGILIEHYAG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
            +P+WL+P+Q  V  IT    +  Q++   L +     E D RNE I +K+REH+++++P
Sbjct: 531 RMPVWLAPVQVAVMGITDRNAQTCQDVCKKLSALEYRTEVDLRNEKIGFKVREHTLQRVP 590

Query: 605 IIIICGDKEASERSIGIRR-----FGSTTTQK-VSLLD 636
            +II GDKE     + +R      FGS      +SLLD
Sbjct: 591 FLIIIGDKEQQSGEVAVRTREGKDFGSMPLNSFISLLD 628


>gi|253996955|ref|YP_003049019.1| threonyl-tRNA synthetase [Methylotenera mobilis JLW8]
 gi|253983634|gb|ACT48492.1| threonyl-tRNA synthetase [Methylotenera mobilis JLW8]
          Length = 635

 Score =  661 bits (1705), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 317/636 (49%), Positives = 441/636 (69%), Gaps = 21/636 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +  PDGS ++F +  T ++VA +I   LAK A+A  +N K+ D S  +  +  + IIT +
Sbjct: 4   IRLPDGSQRSFDLPVTVAEVAMNIGAGLAKAALAGKVNDKLVDTSYLIEVDSDLAIITDK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           +P  L VIRHS AH++A AV+ ++P+ QV IGP+I++GFYYDF  ++PF+ ++L  IEKK
Sbjct: 64  NPEGLDVIRHSAAHLLAYAVKELFPDAQVTIGPVIDNGFYYDFSYKRPFTPEDLIAIEKK 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M E+  +D P  ++ L   +A   F+S  E YK EI+ESIP+ ++V+LY +G + DLCRG
Sbjct: 124 MAELAKKDEPVTRKVLPRAEAVAYFKSIGEQYKAEIIESIPSDDDVSLYTEGNFTDLCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV STG++K F KLMK+AGAYWRGDSN  ML R+YGTAW  + EL  YL+ LEE+EKRD
Sbjct: 184 PHVPSTGKIKSF-KLMKLAGAYWRGDSNNEMLQRVYGTAWRNKDELEAYLFQLEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHL 304
           HRKL +++D FH+ +D  G++FWH +GW I+Q +  YMR+  K   Y+E+ TP V+D+ L
Sbjct: 243 HRKLGKQLDYFHMQDDAPGMVFWHPRGWSIWQEVEQYMRQMFKSFGYQEVRTPTVMDKTL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHW +YR NMF       T  + R +A+KPMNCPGHV +FN+ L SYR+LP+RLAE
Sbjct: 303 WEKSGHWQNYRDNMFV------TSSENREYAVKPMNCPGHVQIFNNQLHSYRDLPLRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+  E      ++   Y DFGF  ++
Sbjct: 357 FGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQIEAEVADFIQMLYKAYGDFGFNDVL 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           VKLSTRPEKRVG+D  WD AE             + + +   +  GEGAFYGPK E+ LK
Sbjct: 417 VKLSTRPEKRVGADETWDKAEAA------LANALNANNLAFDLQPGEGAFYGPKIEFTLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D++GR WQCGTIQ+DFNLP R  A YV   + +  PVM+HRA+ GS+ERFIGI+IEN+ G
Sbjct: 471 DSLGRLWQCGTIQLDFNLPERLGAEYVAEDNSRQRPVMLHRAIVGSMERFIGILIENYAG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
            +PLWL+P+Q +V  I+ S  +Y +++   L+ + +  E D RNE I YKIREHS++K+P
Sbjct: 531 AMPLWLAPVQVMVLNISESQADYVRQVVETLRQNGIRCEFDLRNEKITYKIREHSMQKMP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
            +++ G++E     + +R      T+K   L ++PI
Sbjct: 591 YLLVAGEREMQAGHLAVR------TRKGEDLGSMPI 620


>gi|148653933|ref|YP_001281026.1| threonyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
 gi|172048584|sp|A5WHD5|SYT_PSYWF RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|148573017|gb|ABQ95076.1| threonyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
          Length = 644

 Score =  660 bits (1704), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 307/641 (47%), Positives = 442/641 (68%), Gaps = 15/641 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           + +T PDG++K F    T  +VA+SI   LAK  +A  ++GK+ D SDP+ ++ S+EI+T
Sbjct: 2   VAITLPDGNVKEFDGATTVMEVAQSIGPGLAKATIAGRVDGKLVDASDPITQDASVEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   + +IRHS AH++  AV+ ++P V++ IGP+IEDGFYYD   E+PF+ +++A IE
Sbjct: 62  AKDKDGVDIIRHSTAHLLGHAVKQLYPNVKMVIGPVIEDGFYYDIFSEKPFTPEDMAAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M E+I ++   +K+    E+A ++FE + E YK++++  +P ++ + LY   E+ D+C
Sbjct: 122 KRMAELIKQNYDVIKKMTPREEAIKIFEERGEDYKLKLIADMPEEKELGLYHHQEYVDMC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +T +  K FKLMK++GAYWRGD+    L RIYGTAW  +++L  Y+  +EE+EK
Sbjct: 182 RGPHVPNT-RFLKVFKLMKMSGAYWRGDAKNEQLQRIYGTAWADKKDLQAYIQRIEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQ 302
           RDHRK+ + ++LFH+ E   G++FWH  GW I+Q L  YMR+  KD+ Y+EI TPQ++D+
Sbjct: 241 RDHRKIGKALNLFHMQEQSPGMVFWHPNGWTIYQVLEQYMRKVQKDNGYQEIKTPQIVDR 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHW +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYRELP+RL
Sbjct: 301 SLWEKSGHWGNYATNMFT------TSSESRDYAVKPMNCPCHVQVFNQGLKSYRELPIRL 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+ Q+  E      L + +YKDFGF++
Sbjct: 355 AEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTQAQIQEEVANFIKLTLDVYKDFGFDQ 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I +KLSTRPEKRVG+D  WD AE  +   LD+        +    L GEGAFYGPK E+ 
Sbjct: 415 IEMKLSTRPEKRVGTDESWDIAEKALADALDS------SGLEWEYLPGEGAFYGPKIEFS 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LKD++GR WQCGTIQVD N+P R  A +VN ++E+  P+M+HRA+ GS ERF+G++IE++
Sbjct: 469 LKDSLGRVWQCGTIQVDPNMPERLEAEFVNENNERETPIMLHRAILGSFERFLGMLIEHY 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G +P+WL+P Q +V  IT    +  Q +A+ L++  L   TD RNE I +KIRE ++++
Sbjct: 529 AGWMPVWLAPQQVVVMNITDKQADACQNVASELQNAGLRAITDLRNEKIGFKIRERTLER 588

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           IP +++ GDKE     + +R         +S+ D I ++ K
Sbjct: 589 IPYMLVLGDKEVESGQVNVRTREGENLGVMSVADFIELVQK 629


>gi|261855919|ref|YP_003263202.1| threonyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
 gi|261836388|gb|ACX96155.1| threonyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
          Length = 637

 Score =  660 bits (1703), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 314/646 (48%), Positives = 434/646 (67%), Gaps = 15/646 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           + +T PD S + F    T  ++A  I   LAK A+A  I+ K+ DLS  V  +  I I+T
Sbjct: 2   LTITLPDASQRTFENPVTLGEIAADIGPGLAKAAIAGKIDDKLVDLSRVVDHDARIAIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +DP  L VIRHS AH+MA+AV+ ++P  QV IGP+I++GFYYDF  E+PF+ ++LA IE
Sbjct: 62  AKDPEGLEVIRHSTAHLMAQAVKQLYPSAQVTIGPVIDNGFYYDFYFERPFNDEDLAAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M E+ A+     ++ +   +A + F+   E +KVEI++SIP  E +TLY QG++ D C
Sbjct: 122 ARMHELAAKGDDLTRRVVDRSEAVQFFDQLGEEFKVEIIQSIPEAEELTLYTQGDFTDFC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +T ++K  FKLMKVAGAYWRGD+  PML+RIYGTA+ + +EL  YL  L E+EK
Sbjct: 182 RGPHVPNTNRLK-VFKLMKVAGAYWRGDAKNPMLTRIYGTAFASDKELKVYLNQLAEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQ 302
           RDHR++ ++ +LFH  E+  G++FWH KGW ++Q +  +MR   +   Y+EI  PQ+LD 
Sbjct: 241 RDHRRIGKQQNLFHFQEEAPGLVFWHPKGWALWQVIEQHMRGIYRSSGYDEIRCPQILDV 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD+Y+ NMF       T  + RTFA+KPMNCPGHV VFNHGL SYR+LP+R 
Sbjct: 301 SLWKKSGHWDNYQENMFF------TESEKRTFAVKPMNCPGHVQVFNHGLHSYRDLPIRY 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFGS +RNEPSG+LHG++RVRGFTQDD H+FC + Q+ +E    H   +S+Y  FGF  
Sbjct: 355 GEFGSCHRNEPSGALHGILRVRGFTQDDGHIFCMESQIESEVKAFHEQALSVYATFGFTD 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I VK++ RP+KR+GSD +WD+AE  ++             +    L GEGAFYGPK EY 
Sbjct: 415 IQVKIALRPDKRLGSDVVWDEAEAALR------GALRAAGVAWTELPGEGAFYGPKIEYH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LKDAIGR WQ GTIQVDF +P R  A YV+ HSE+ HPVM+HRA+ GS+ERFIGI+IE+ 
Sbjct: 469 LKDAIGRTWQLGTIQVDFMMPERLGATYVDEHSERRHPVMLHRAIVGSMERFIGILIEHH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G LP WL+PIQ +V  IT     Y Q++   LK+  + +  D RNE + +KIREH++++
Sbjct: 529 AGMLPFWLAPIQVVVMGITDKHAGYVQQLTAKLKASGIRVVEDLRNEKVGFKIREHTLER 588

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
           +P +++ GD+E    SI +R    T    +++ D +  L  ES  P
Sbjct: 589 VPYLLVAGDREMETESIAVRTREGTDLGVMAVTDLLEKLQSESRAP 634


>gi|254515029|ref|ZP_05127090.1| threonyl-tRNA synthetase [gamma proteobacterium NOR5-3]
 gi|219677272|gb|EED33637.1| threonyl-tRNA synthetase [gamma proteobacterium NOR5-3]
          Length = 645

 Score =  660 bits (1703), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 313/646 (48%), Positives = 436/646 (67%), Gaps = 18/646 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP+   +T PDGS + F    T ++VA  I   LAK A+A  ++G+  D S  +  +  +
Sbjct: 1   MPT---ITLPDGSQREFSNAVTVAEVAADIGPGLAKAALAGVVDGREVDTSFSIDADAQL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT  D   + +IRHS AH++A AVQ ++P  QV IGP+I+DGFYYDF  E  F+ D+L
Sbjct: 58  AIITERDDAGVELIRHSTAHLLAMAVQDLFPGTQVTIGPVIDDGFYYDFAGEHQFTPDDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IE++M +I+A D P  +  +  ++A   FE   E+YKVEI+  +P  E ++LY+QG W
Sbjct: 118 PKIEERMAQIVADDVPVERIVMDRDEAAAAFEKMGESYKVEIIRDLPEGEEISLYKQGAW 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV STG++  F KL K+AGAYWRGDSN  ML R+YGTAW  +++L QYL  +E
Sbjct: 178 MDLCRGPHVPSTGKLGAF-KLTKLAGAYWRGDSNNEMLQRVYGTAWANKKQLKQYLRRIE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+EKRDHRK+ +++DLFH  E+  G++FWH +GW I+Q +  YMR + +  DY+EI TPQ
Sbjct: 237 EAEKRDHRKIGKKLDLFHTQEEAPGMVFWHPQGWTIYQVIEQYMREQQRAQDYQEIKTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D  LW++SGH D +  +MF +        D R FA+KPMNCP HV VFN GL+SYR+L
Sbjct: 297 LVDMSLWEKSGHADKFGDDMFMLTA------DEREFAVKPMNCPCHVQVFNQGLRSYRDL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFGS +RNEPSGSLHG+MRVRGFTQDD H+FCT+EQ+  E     + + ++Y DF
Sbjct: 351 PLRLAEFGSCHRNEPSGSLHGIMRVRGFTQDDGHIFCTEEQIQPEVSTFIDFLHAVYADF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF++++ +LSTRP +RVG+D  WD AE  +   LD      Q+      L GEGAFYGPK
Sbjct: 411 GFDEVIYRLSTRPAQRVGTDEDWDRAEKALADALDAQGLDWQE------LPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD IGR WQ GTIQVDF++P R +A YV     +  PVM+HRA+ GS ERFIGI+
Sbjct: 465 IEFSLKDCIGRVWQMGTIQVDFSMPGRLDAQYVAEDGSRKTPVMLHRAILGSFERFIGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IENF+G+ P+WL+P QA+V  IT    EY + + + LK+    + +D RNE I +KIREH
Sbjct: 525 IENFEGSFPVWLAPKQAVVINITEKQDEYVRFVEDSLKNKGFRVFSDLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +I+++P +++ G+KE   +++ +R         +SL     IL ++
Sbjct: 585 TIQRVPYLVVVGEKEVEAKTVAVRSRNGEDLGTMSLEAFTEILDQD 630


>gi|114319929|ref|YP_741612.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Alkalilimnicola
           ehrlichii MLHE-1]
 gi|122312208|sp|Q0AAL5|SYT_ALHEH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|114226323|gb|ABI56122.1| Ser-tRNA(Thr) hydrolase [Alkalilimnicola ehrlichii MLHE-1]
          Length = 641

 Score =  660 bits (1702), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 309/624 (49%), Positives = 434/624 (69%), Gaps = 18/624 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SI 59
           MP+   +T PDGS + F    T  DVAESI + LA+ A+A  ++G++ DLS  + +   +
Sbjct: 1   MPA---ITLPDGSRREFDHPVTVRDVAESIGKGLARAALAGRVDGRLVDLSHRIDDDVQL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EI+T  DP  + +IRHS AH+MA+AV+ ++PE QV IGP+IE+GFYYDF  ++PF+ D+L
Sbjct: 58  EIVTDRDPDGVDMIRHSTAHLMAQAVKELFPEAQVTIGPVIENGFYYDFAYKRPFTEDDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM+E+  +D    ++    ++A   F  + E YK EI+E +P  E +++Y+QG++
Sbjct: 118 KAIEKKMEELARQDFEVHREVWDRDEAIRFFLEQGEQYKAEIIEDLPEHETISVYKQGDF 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV +TG++K F KL KVAGAYWRG S+  ML RIYGTAW  +++L  YL+ L 
Sbjct: 178 LDLCRGPHVPNTGKLKAF-KLQKVAGAYWRGKSDNEMLQRIYGTAWPDKKQLKAYLHRLA 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+EKRDHR++ R  +LFH+ E+  G+ FWH KGW+I+  +  Y+RR  +   Y+EI+TPQ
Sbjct: 237 EAEKRDHRRIGRAQNLFHLQEEAPGMAFWHPKGWQIYLEVQEYIRRLTRGHGYQEIHTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D+ LW++SGHWD ++ NMF       T  + R +A+KPMNCP HV V+N GLKSYR+L
Sbjct: 297 LVDRSLWEKSGHWDKFQDNMFI------TESESRDYAVKPMNCPCHVQVYNQGLKSYRDL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFGS +RNEPSG+LHGLMRVR F QDDAH+FCT++Q+  E     +L+   Y DF
Sbjct: 351 PLRLAEFGSCHRNEPSGTLHGLMRVRNFVQDDAHIFCTEDQIQQEVADFIDLVFKAYNDF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+ +++ LSTRP++RVG DALWD AE+ ++  L+      Q      +  GEGAFYGPK
Sbjct: 411 GFDDVIIALSTRPDERVGEDALWDKAEHALEEALNRAGLEWQ------LQPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD +GR WQ GTIQVDF++P R  A YV     K  PVM+HRA+ GS+ERFIGI+
Sbjct: 465 IEFTLKDCLGRTWQLGTIQVDFSMPGRLGATYVAEDGSKKVPVMLHRAILGSLERFIGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE++ G LP WL+P+QA+V  IT    EYA+ I    +   L ++ D RNE I +KIREH
Sbjct: 525 IEHYAGALPPWLAPVQAVVLNITDRQGEYARRIEKRFRERGLRVDADLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIR 622
           +++K+P +++ GDKE    ++ +R
Sbjct: 585 TLQKVPYMLVVGDKEVENNTVAVR 608


>gi|89094703|ref|ZP_01167639.1| threonyl-tRNA synthetase [Oceanospirillum sp. MED92]
 gi|89081049|gb|EAR60285.1| threonyl-tRNA synthetase [Oceanospirillum sp. MED92]
          Length = 639

 Score =  660 bits (1702), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 309/618 (50%), Positives = 433/618 (70%), Gaps = 15/618 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    T  +VA  I   LAK A+A  ++G+  D S  +  +  + IIT  
Sbjct: 4   ITLPDGSKREFANPVTVFEVAADIGAGLAKAALAGKVDGQEVDTSYTIENDADLAIITAR 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L VIRHS AH+MA AVQ ++P  QV IGP+IEDGFYYDF  E+PF+ ++L +IEKK
Sbjct: 64  DEAGLEVIRHSTAHLMAMAVQELFPGAQVTIGPVIEDGFYYDFAYERPFTPEDLEKIEKK 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M E+  ++ P  +  +S ++A ++F+   E YKVE+L+++P  E+++ Y QG++ DLCRG
Sbjct: 124 MAELAKQNLPVTRSLMSRDEATKMFDEMGEKYKVELLQAVPDSEDLSFYSQGDFIDLCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV STG +K F KLMKVAGAYWRGDSN  ML RIYGTAW  ++ L  YL+ LEE+EKRD
Sbjct: 184 PHVPSTGHIKAF-KLMKVAGAYWRGDSNNEMLQRIYGTAWGDKKALKAYLHRLEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHL 304
           HRKL +++DLFH+ E+  G++FWH KGW ++Q +  YMR+K++   Y E+ TPQV+++ L
Sbjct: 243 HRKLGKQLDLFHLQEEAPGMVFWHPKGWALYQGIEQYMRQKLRPRKYVEVKTPQVVERTL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHW+ +   MF       T  + R FA+KPMNCP HV V+N G++SYR+LP+R+AE
Sbjct: 303 WEKSGHWEKFSEEMFT------THSENRDFAVKPMNCPCHVQVYNQGIRSYRDLPLRMAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNEPSG+LHG+MRVRGF QDD H+FC ++ + +E  +  + +  +Y DFGF++I 
Sbjct: 357 FGSCHRNEPSGALHGIMRVRGFVQDDGHIFCAEDSIQSEVSEFIDFLHEVYADFGFQEIQ 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
            KLSTRPEKRVGSD +WD +E   K + D + N+    +   +L GEGAFYGPK E+ LK
Sbjct: 417 YKLSTRPEKRVGSDEVWDKSE---KALADALDNAG---LKWDLLPGEGAFYGPKIEFSLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D +GR WQCGT+QVDF++P R  A +VN   E+  PVMIHRA+ GS ERFIGI+IEN+ G
Sbjct: 471 DCLGRVWQCGTVQVDFSMPGRLGAQFVNEQGERETPVMIHRAILGSFERFIGILIENYAG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
            LP WL+P+QA+V  IT    +Y +++   L++     E+D RNE I +KIRE +++K+P
Sbjct: 531 ALPTWLAPVQAVVMNITDKQADYCEKVVQNLENKGFRAESDLRNEKIGFKIRERTLQKVP 590

Query: 605 IIIICGDKEASERSIGIR 622
            +++ GDKE    ++ +R
Sbjct: 591 YLLVIGDKEVEAGAVAVR 608


>gi|307545104|ref|YP_003897583.1| threonyl-tRNA synthetase [Halomonas elongata DSM 2581]
 gi|307217128|emb|CBV42398.1| threonyl-tRNA synthetase [Halomonas elongata DSM 2581]
          Length = 632

 Score =  659 bits (1699), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 309/618 (50%), Positives = 424/618 (68%), Gaps = 15/618 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS ++F    +   +AESI   LAK  VA  I+G++ D +D +  +  + IIT  
Sbjct: 4   VTLPDGSQRSFDEPLSIMQLAESIGTGLAKACVAGRIDGELVDAADIIDHDAEVAIITAR 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           DP  L +IRHSCAH++  AV+ ++P+ ++AIGP+IEDGFYYD D  +  + ++L  IE +
Sbjct: 64  DPEGLDIIRHSCAHLIGHAVKQLYPDAKMAIGPVIEDGFYYDIDFGRSITPEDLEAIEAR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+ +I      +++Y+  ++A   F  + E YK EI+  IP  E + LY   E+ D+CRG
Sbjct: 124 MKSLIETGYDVVREYVDRDRAMLTFLHRDEPYKQEIVREIPEGETIRLYHHQEYTDMCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +T  +K F KL K+AGAYWRGD+ RPML+RIYGTAW  +++L  YL  LEE+EKRD
Sbjct: 184 PHVPNTRHLKAF-KLTKLAGAYWRGDAERPMLTRIYGTAWGDKKQLKAYLKRLEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHL 304
           HRKLAR++DLFH+ E+  G++FWH +GW ++Q +  YMR+  KD  Y+EI  PQV+D  L
Sbjct: 243 HRKLARKLDLFHMQEEAPGMVFWHPRGWTLWQVVEQYMRQVYKDGGYQEIRCPQVMDVSL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHWD+Y   MF       T  + R +ALKPMNCPGHV VFN GL+SYRELPVR  E
Sbjct: 303 WKKSGHWDNYADGMFF------TESEKREYALKPMNCPGHVQVFNSGLRSYRELPVRYGE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FG  +RNEPSG+LHG+MRVR FTQDD HVFCT+EQ+  E    H   + +Y+DFGFE I 
Sbjct: 357 FGGCHRNEPSGALHGIMRVRAFTQDDGHVFCTEEQIEPEVTSFHRQALQVYRDFGFEDIA 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           VK++ RPEKR+G DA+WD AE  ++G L T        ++   L GEGAFYGPK EY +K
Sbjct: 417 VKIALRPEKRLGDDAVWDRAEEALRGALRTCD------VDWDELPGEGAFYGPKIEYHMK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D +GR+WQ GT+QVDF +P R  A YV    E+  PVM+HRA+ GS+ERFIGI+IE++ G
Sbjct: 471 DCLGREWQVGTMQVDFMMPVRLGAQYVAEDGERRSPVMLHRAIVGSMERFIGILIEHYAG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
            +PLWL+P QA+V TIT +  +YA  +   L+   L ++ D RNE I +KIREH+++K+P
Sbjct: 531 AMPLWLAPQQAVVLTITDAQRDYATYLEQRLQKKGLRVKADLRNEKIGFKIREHTLQKVP 590

Query: 605 IIIICGDKEASERSIGIR 622
            +++ GDKE    S+ +R
Sbjct: 591 YLLVVGDKEVEADSVAVR 608


>gi|149374489|ref|ZP_01892263.1| threonyl-tRNA synthetase [Marinobacter algicola DG893]
 gi|149361192|gb|EDM49642.1| threonyl-tRNA synthetase [Marinobacter algicola DG893]
          Length = 641

 Score =  658 bits (1698), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 306/618 (49%), Positives = 431/618 (69%), Gaps = 15/618 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPE 65
           +T PDGS ++F    T  DVA  I   LAK A+A  +NGK+ D S P+ E   + I+T  
Sbjct: 4   VTLPDGSHRSFVESVTVHDVAADIGAGLAKAAIAGRVNGKLVDTSFPIEEDAELAIVTER 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   + +IRHS AH++A AV+ ++P  QV IGP++++GFYYDF  ++PF++++L++IEK+
Sbjct: 64  DEDGVDIIRHSTAHLLAMAVKELFPSAQVTIGPVVDNGFYYDFKFDRPFTNEDLSRIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+E+  +D P  +  +S ++A  LF+   E YKV I+E IP +E+++ YRQG++ DLCRG
Sbjct: 124 MEELAKQDIPVSRSVMSRDEAVRLFDEMGEEYKVRIIEDIPGEEDLSFYRQGDFIDLCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +TG++K F KL KVAGAYWRGD++   L R+YGTAW  +++L  YL+ LEE+EKRD
Sbjct: 184 PHVPNTGKLKAF-KLTKVAGAYWRGDTSNEQLQRVYGTAWGNKKDLKAYLHRLEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHL 304
           HRK+ +++ LFH+ E+  G++FWH  GW ++Q +  YMR ++ K  Y+EI TPQV+ + L
Sbjct: 243 HRKIGKKLSLFHMQEEAPGMVFWHPDGWSLYQEIEQYMRGKQHKHGYQEIKTPQVVSRAL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHWD ++ +MF       T  +   +A+KPMNCP HV VFN GLKSY++LP+RLAE
Sbjct: 303 WEKSGHWDKFKDDMFT------TESEKHDYAIKPMNCPCHVQVFNQGLKSYKDLPLRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNE SG+LHGLMRVRGFTQDDAH+FC ++ +  E      ++  IY DFGF +I+
Sbjct: 357 FGSCHRNEASGALHGLMRVRGFTQDDAHIFCEEDAIQQEVSDFIGMLHEIYADFGFTEIL 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
            KLSTRPEKRVGSD +WD +E  ++  L+      ++ ++  +L GEGAFYGPK E+ LK
Sbjct: 417 YKLSTRPEKRVGSDEVWDKSEAALEEALN------REGVDWELLPGEGAFYGPKIEFSLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D IGR WQCGTIQVDF++P R  A YV  +SE+  PVM+HRAV GS ERFIGI+IE ++G
Sbjct: 471 DCIGRVWQCGTIQVDFSMPGRLGAQYVADNSERKTPVMLHRAVLGSFERFIGILIEEYEG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P WL+P Q  V  IT +  +Y Q +A    S    +  D RNE I +KIREH+I K+P
Sbjct: 531 AFPTWLAPTQIAVLNITDNQRDYCQNLAKKWDSLGYRVNADLRNEKIGFKIREHTINKVP 590

Query: 605 IIIICGDKEASERSIGIR 622
            +++ GDKE    ++ +R
Sbjct: 591 FLVVIGDKEVENNAVAVR 608


>gi|269468339|gb|EEZ80013.1| threonyl-tRNA synthetase [uncultured SUP05 cluster bacterium]
          Length = 630

 Score =  658 bits (1698), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 308/642 (47%), Positives = 440/642 (68%), Gaps = 20/642 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDG+ K+F       +VA+SI   LAK  +A  +NG++ D S  +  + S+ IIT +
Sbjct: 4   ITLPDGTEKSFDQPLNVFEVAKSIGSGLAKATLAGKVNGEMVDASYMIEADASVSIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L VIRHS AH++A+A Q ++P+ QV IGP+I++GF+YDF  +  FS  +LA+IEK 
Sbjct: 64  DEEGLEVIRHSTAHLLAQATQMLYPDAQVTIGPVIDNGFFYDFAYKDGFSEGDLAKIEKN 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M  ++ ++    +  +  ++A + F+ K E YK EI+ESIPA + ++LY+QG++ DLCRG
Sbjct: 124 MNHLVKQNLKIERSEMGRDEAVQFFKDKGEYYKAEIIESIPADQTLSLYQQGDFIDLCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV ST ++K F KLMK+AGAYWRGDSN  ML R+YGTAW ++ +L  YLY LEE+EKRD
Sbjct: 184 PHVPSTAKLKAF-KLMKLAGAYWRGDSNNEMLQRVYGTAWASKDDLKDYLYRLEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHL 304
           HRK+ +  DLFH+ E+  G++FWH KGW ++Q +  YMR   +D DY+E++TPQ++D+ L
Sbjct: 243 HRKIGKTQDLFHMQEEAPGMVFWHEKGWTLYQIVEQYMRSVFRDNDYKEVHTPQLIDRTL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHWD +   MF       T  + R +A+KPMNCP H+ ++N GLKSYR+LP+RLAE
Sbjct: 303 WEKSGHWDKFGDAMFT------TSSENRDYAVKPMNCPAHIQIYNQGLKSYRDLPLRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNEPSG+LHG+MRVR F QDD H+FCT+ Q+ +E     +L   +YK+FGFE + 
Sbjct: 357 FGSCHRNEPSGTLHGIMRVRNFVQDDGHIFCTENQIQDEVSTFIDLTFDVYKNFGFENVD 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDT--IKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           +KLSTRPEKRVGSD +WD AE  +   LD   IK   Q+        GEGAFYGPK E++
Sbjct: 417 IKLSTRPEKRVGSDEVWDRAEASLAEALDAKGIKWELQE--------GEGAFYGPKIEFV 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LKD + R+WQCGT+QVDF++P R +A Y+   + K  PVM+HRA+ GS+ERF+GI+IE++
Sbjct: 469 LKDCLDREWQCGTLQVDFSMPERLDAHYIAEDNSKQTPVMLHRAIVGSLERFVGILIEHY 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
           +G  P WL+PIQA++  I+    ++   +   LK   L + +D RNE I +KIREHS+++
Sbjct: 529 EGAFPSWLAPIQAVILNISEKQHDFVANVEKKLKKQGLRVISDLRNEKIGFKIREHSMQR 588

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            P I++ G +E     I +R+ G      +S ++A   L KE
Sbjct: 589 YPYILVVGGREMENDEISVRKRGGEDLGSMS-IEAFVKLVKE 629


>gi|326570601|gb|EGE20637.1| threonyl-tRNA synthetase [Moraxella catarrhalis BC7]
          Length = 639

 Score =  658 bits (1697), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 310/641 (48%), Positives = 432/641 (67%), Gaps = 15/641 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           + +T PDGSIK F  + T   VA+SI   LAK  VA  +NG++ D SDP+  + ++EIIT
Sbjct: 2   VAITLPDGSIKQFDGNTTVMQVAQSIGAGLAKATVAGRVNGRLVDASDPITTDATVEIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+D   + +IRHS AH++  AV+ ++P+V++ IGP+I+DGFYYD   E+PF+ D++A+IE
Sbjct: 62  PKDDAGVEIIRHSTAHLLGHAVKQLYPDVKMVIGPVIDDGFYYDIYSERPFTLDDMAKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M E+I +D   +K+    ++  + F  + E YK+ ++E +P + ++ LY   E+ D+C
Sbjct: 122 ARMTELINQDYDVIKKMTPRDEVIKTFLERGETYKLRLVEDMPDETHMGLYHHQEYIDMC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +T +  K FKL K++GAYWRGD+    L RIYGTAW  +++L  YL  LEE+EK
Sbjct: 182 RGPHVPNT-RFLKAFKLTKMSGAYWRGDAKNEQLQRIYGTAWADKKQLKAYLQRLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQ 302
           RDHRK+ + ++LFH+ E   G++FWH  GW I+Q L  YMR+  KD+ Y EI TPQ++D+
Sbjct: 241 RDHRKIGKALNLFHMQEQAPGMVFWHPNGWTIWQVLEQYMRKVQKDNGYLEIKTPQIVDR 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD+Y   MF       T  + R +A+KPMNCP HV VFN GLKSYR+LP+RL
Sbjct: 301 SLWEKSGHWDNYGEMMFT------TASEKRDYAIKPMNCPCHVQVFNQGLKSYRDLPLRL 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSGSLHG+MRVRGFTQDDAH+FCT  Q+  E L    L + +YKDFGF+ 
Sbjct: 355 AEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTNAQIRQEALNFIKLTLDVYKDFGFDH 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I +KLSTRPEKRVG+D LWD AE  +   LD         ++  +  GEGAFYGPK E+ 
Sbjct: 415 IQMKLSTRPEKRVGADELWDLAEQALADALDNAG------LDWELQAGEGAFYGPKIEFS 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+D IGR WQCGT+Q+DFNLP R NA +V    E+  PVM+HRA+ GS ERFIGI+IE++
Sbjct: 469 LQDCIGRVWQCGTLQLDFNLPERLNAEFVGESGERERPVMLHRAILGSFERFIGILIEHY 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P Q +V  IT    +   ++ + L +      +D RNE I +KIRE ++++
Sbjct: 529 AGLFPAWLAPQQVVVMNITDKQADSVGDVVSKLNAKGYRAISDLRNEKIGFKIRERTLER 588

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           IP ++I GDKE    ++ +R         ++L D I +L K
Sbjct: 589 IPFMLILGDKEVESGTVNVRTRTGENLGSMNLDDFIAVLDK 629


>gi|58584729|ref|YP_198302.1| threonyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of
           Brugia malayi]
 gi|73919844|sp|Q5GSG4|SYT_WOLTR RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|58419045|gb|AAW71060.1| Threonyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of
           Brugia malayi]
          Length = 632

 Score =  657 bits (1696), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 312/645 (48%), Positives = 442/645 (68%), Gaps = 18/645 (2%)

Query: 5   IKLTF-PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEII 62
           I++TF     ++ +    TG D+ +     ++K+A+A+ +NG++ DLS  +   + I++I
Sbjct: 2   IRITFLAKQKVEEYSSRVTGFDILQP---DISKEAIALRVNGELYDLSREIESDTEIDVI 58

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
              D   L +IRH  AHIMA+AV+ ++P  QV IGP I+DGFYYDF  +  F++D+LA I
Sbjct: 59  QLNDEEGLDIIRHDAAHIMAQAVKELFPNAQVTIGPTIQDGFYYDFAIDHTFTTDDLAAI 118

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EKKM+EII  +  F+++  + ++A   F S  E YKV+I+ SIP  E++T+YRQG++ DL
Sbjct: 119 EKKMKEIIKSNHRFIREVWARKQAINFFSSIGEKYKVDIISSIPESEDLTVYRQGDFVDL 178

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH  ST +VK F KLMKVAGAYWRG+   PML RIYGTAW  + EL  YL  LEE++
Sbjct: 179 CRGPHSPSTSRVKAF-KLMKVAGAYWRGNVKGPMLQRIYGTAWRNKDELNIYLKRLEEAK 237

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLD 301
           KRDHR++A++MDLFHI E+  G +FWH +G+ ++  L SY+R+K I + Y E+ TP ++ 
Sbjct: 238 KRDHRRIAKDMDLFHIQEEAVGQVFWHEQGYTLYNVLESYIRKKLINNGYAEVKTPILVS 297

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW++SGHWD +R NMF V  ++      +  A+KPMNCP HV +FN   +SYR LP+R
Sbjct: 298 KELWEKSGHWDKFRENMFIVDESES-----KKLAIKPMNCPCHVQIFNSYTRSYRNLPIR 352

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AEFG  +RNE SGSLHGLMRVRGFTQDDAH+FC +EQ+ +E +K   L+  +Y + GF 
Sbjct: 353 MAEFGMCHRNESSGSLHGLMRVRGFTQDDAHIFCMEEQVNSETVKFCALLKEVYSELGFN 412

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
           +I VK S RP  R G + +WD AE   K +L+ +K +    ++  +  GEGAFYGPK E+
Sbjct: 413 EISVKFSDRPNVRAGDNEVWDRAE---KALLEAVKEAG---LSYELNPGEGAFYGPKLEF 466

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
           ILKDAIGR WQCGT+QVDF LP R  AFY+ +  +K HPVM+HRA+ G+ ERFIGI+IE+
Sbjct: 467 ILKDAIGRSWQCGTLQVDFILPERLGAFYIGADGQKYHPVMLHRAILGTFERFIGILIEH 526

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  PLWL+P Q ++ T+T+ A  YA EI+N+LK   + ++TD  NE ++YKIR HS  
Sbjct: 527 YAGKFPLWLAPTQLVILTVTNEADNYATEISNVLKEQGVRVKTDLTNEKVSYKIRLHSSN 586

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           K+PI+ I G  E + +++ +R  GS   +  S   A+ +L K+ L
Sbjct: 587 KVPILWIVGKNEVASKTVSVRNLGSEKQESSSCEKAVKLLLKKVL 631


>gi|325265785|ref|ZP_08132472.1| threonine--tRNA ligase [Kingella denitrificans ATCC 33394]
 gi|324982768|gb|EGC18393.1| threonine--tRNA ligase [Kingella denitrificans ATCC 33394]
          Length = 637

 Score =  657 bits (1695), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 305/642 (47%), Positives = 435/642 (67%), Gaps = 16/642 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           + +T PDGSI+ +    T + +A SI   LAK  VA  +NG + D  DP+ E  +++IIT
Sbjct: 2   LNITLPDGSIRQYESPVTVAQIAASIGSGLAKATVAGKVNGVLRDACDPITEDAAVQIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+DP  + +IRHSCAH++  AV+ ++P  ++ IGP+IEDGFYYD   E+PF+ +++  IE
Sbjct: 62  PKDPEGVEIIRHSCAHLVGHAVKQLFPNAKMVIGPVIEDGFYYDIAAEKPFTPEDMKAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           ++M+++I +D   +K+ L   +  E+F+ + E YK+ +++ +P    + +Y   E+ D+C
Sbjct: 122 ERMKQLINQDYDVIKKMLPRAEVIEIFKQRGEDYKLRLVDDMPEVTEMGMYFHQEYVDMC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +T  +K F KL K++GAYWRGDSN   L RIYGTAW ++ EL  Y+  +EE+EK
Sbjct: 182 RGPHVPNTRFLKNF-KLTKMSGAYWRGDSNNEQLQRIYGTAWASKDELKAYITRIEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQ 302
           RDHRKL R++DLFH+ ++  G++FWH +GW ++Q +  +MRR++    Y E+ TPQ++D+
Sbjct: 241 RDHRKLGRQLDLFHLQDEAPGMVFWHPRGWTLWQVIEQHMRRELDAAGYREVKTPQIMDK 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             W++SGHW +Y+ NMF       T  + R +A+KPMNCPGHV +FN+ L+SYR+LP+RL
Sbjct: 301 TFWEKSGHWANYKDNMFL------TASEKREYAVKPMNCPGHVQIFNNTLRSYRDLPMRL 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+  E  K + L++ IY+ FGFE 
Sbjct: 355 AEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIAEETRKFNLLVMKIYQQFGFEH 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + VKLS RPE+R GSD +WD AE  ++  L       Q+      L GEGAFYGPK EY 
Sbjct: 415 VSVKLSLRPEQRAGSDEIWDKAEQGLRDALTACGVEWQE------LPGEGAFYGPKVEYH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+GR WQCGTIQ+DF LP R +A YV   + K  PVM+HRA+ GS+ERFIGI+IE  
Sbjct: 469 IKDALGRSWQCGTIQLDFVLPERLDAEYVAEDNSKKRPVMLHRAILGSLERFIGILIEEH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G+ PLWL+P+Q +V  IT    +Y +E+   LK+     E D RNE I YKIR++S  +
Sbjct: 529 AGSFPLWLAPVQMVVMNITEKQADYCREVVEKLKAAGFRAEADLRNEKIGYKIRDNSQMR 588

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            P  I+ GDKE     + +RR G      + + D I +L KE
Sbjct: 589 YPYQIVVGDKEMENGQVAVRRKGEDLG-SMKVEDFIALLQKE 629


>gi|326571308|gb|EGE21325.1| threonyl-tRNA synthetase [Moraxella catarrhalis BC8]
          Length = 639

 Score =  657 bits (1694), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 310/639 (48%), Positives = 431/639 (67%), Gaps = 15/639 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           + +T PDGSIK F  + T   VA+SI   LAK  VA  +NG++ D SDP+  + ++EIIT
Sbjct: 2   VAITLPDGSIKQFDGNTTVMQVAQSIGAGLAKATVAGRVNGRLVDASDPITTDATVEIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+D   + +IRHS AH++  AV+ ++P+V++ IGP+I+DGFYYD   E+PF+ D++A+IE
Sbjct: 62  PKDDAGVEIIRHSTAHLLGHAVKQLYPDVKMVIGPVIDDGFYYDIYSERPFTLDDMAKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M E+I +D   +K+    ++  + F  + E YK+ ++E +P + ++ LY   E+ D+C
Sbjct: 122 ARMTELINQDYDVIKKMTPRDEVIKTFLERGETYKLRLVEDMPDETHMGLYHHQEYIDMC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +T +  K FKL K++GAYWRGD+    L RIYGTAW  +++L  YL  LEE+EK
Sbjct: 182 RGPHVPNT-RFLKAFKLTKMSGAYWRGDAKNEQLQRIYGTAWADKKQLKAYLQRLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQ 302
           RDHRK+ + ++LFH+ E   G++FWH  GW I+Q L  YMR+  KD+ Y EI TPQ++D+
Sbjct: 241 RDHRKIGKALNLFHMQEQAPGMVFWHPNGWTIWQVLEQYMRKVQKDNGYLEIKTPQIVDR 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD+Y   MF       T  + R +A+KPMNCP HV VFN GLKSYR+LP+RL
Sbjct: 301 SLWEKSGHWDNYGEMMFT------TASEKRDYAIKPMNCPCHVQVFNQGLKSYRDLPLRL 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSGSLHG+MRVRGFTQDDAH+FCT  Q+  E L    L + +YKDFGF+ 
Sbjct: 355 AEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTNAQIRQEALNFIKLTLDVYKDFGFDH 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I +KLSTRPEKRVG+D LWD AE  +   LD         ++  +  GEGAFYGPK E+ 
Sbjct: 415 IQMKLSTRPEKRVGADELWDLAEQALADALDNAG------LDWELQAGEGAFYGPKIEFS 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+D IGR WQCGT+Q+DFNLP R NA +V    E+  PVM+HRA+ GS ERFIGI+IE++
Sbjct: 469 LQDCIGRVWQCGTLQLDFNLPERLNAEFVGESGERERPVMLHRAILGSFERFIGILIEHY 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P Q +V  IT    +   ++ + L +      +D RNE I +KIRE ++++
Sbjct: 529 AGLFPTWLAPQQVVVMNITDKQADSVGDVVSKLNAKGYRAISDLRNEKIGFKIRERTLER 588

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           IP ++I GDKE    ++ +R         ++L D I IL
Sbjct: 589 IPFMLILGDKEVESGTVNVRTRTGDNLGSMNLDDFIKIL 627


>gi|82701621|ref|YP_411187.1| threonyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
 gi|123727233|sp|Q2YBS6|SYT_NITMU RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|82409686|gb|ABB73795.1| Ser-tRNA(Thr) hydrolase [Nitrosospira multiformis ATCC 25196]
          Length = 638

 Score =  656 bits (1693), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 319/627 (50%), Positives = 433/627 (69%), Gaps = 16/627 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPE 65
           +  PDGS + +    T  +VA SI   LA+ A+A  +NGK+ DLS  +   S + IIT +
Sbjct: 4   VRLPDGSERVYEHSVTVGEVAASIGAGLARAALAGKVNGKLVDLSARIENDSDVAIITEK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHS AH++A AV+ ++PE QV IGP+IEDGFYYDF  ++PF+ ++LA IEK+
Sbjct: 64  DAEGLEIIRHSSAHLLAHAVKELFPEAQVTIGPVIEDGFYYDFSYKRPFTPEDLAAIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M EI  R+    +Q     +A   F+++ E YK +I+E+IP  E+V+LY QG + DLCRG
Sbjct: 124 MAEISTRNLKVERQVWDRSEAINFFKNQGEHYKAQIIEAIPGDEDVSLYSQGNFTDLCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +T ++K  FKLMK+AGAYWRGDS+  ML RIYGTAW  + +   YL  LEE+EKRD
Sbjct: 184 PHVPATSRLK-VFKLMKLAGAYWRGDSHNEMLQRIYGTAWTNKDDQNAYLRRLEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHL 304
           HRKL +++ LFH+ E+  G++FWH KGW ++Q +  YMR   +++ Y EI TP VLD+ L
Sbjct: 243 HRKLGKQLGLFHLQEEAPGMVFWHPKGWVVWQQVEQYMRDIFRNNGYLEIRTPSVLDKGL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHW+++R NMF  +  D      R F++KPMNCPGHV VF  GLKSYR+LP+RLAE
Sbjct: 303 WERSGHWENFRENMFVTQAED------REFSVKPMNCPGHVQVFKQGLKSYRDLPLRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNEPSG+LHG+MRVR FTQDDAH+FCT+ Q+ +E ++  +L+  +Y DFGF  I+
Sbjct: 357 FGSCHRNEPSGALHGIMRVRAFTQDDAHIFCTESQVQDEAVQFIDLLQKVYNDFGFNDIL 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           VKLSTRP KRVGS+  WD AE  ++  L+         +   +  GEGAFYGPK E+ LK
Sbjct: 417 VKLSTRPAKRVGSEEQWDKAEEALRSALN------HKNLIWELQPGEGAFYGPKIEFSLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D+IGR WQCGT+Q+DF++P R  A +V   + +  PVM+HRA+ GS+ERFIGI+IEN  G
Sbjct: 471 DSIGRIWQCGTLQLDFSMPERLGAEFVAEDNSRQIPVMLHRAILGSLERFIGILIENHAG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
            LPLWLSP  A+V  I+    +YA+E+   L+   +    D RNE I YKIREHS++K+P
Sbjct: 531 ALPLWLSPDHAVVLNISEGQADYAREVTEELRRAGIRAYADLRNEKITYKIREHSLQKLP 590

Query: 605 IIIICGDKEASERSIGIR-RFGSTTTQ 630
             II GDKE + + + +R R GS   Q
Sbjct: 591 YQIIVGDKEVAAQRVAVRTRSGSDLGQ 617


>gi|319794591|ref|YP_004156231.1| threonyL-tRNA synthetase [Variovorax paradoxus EPS]
 gi|315597054|gb|ADU38120.1| threonyl-tRNA synthetase [Variovorax paradoxus EPS]
          Length = 635

 Score =  656 bits (1692), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 301/632 (47%), Positives = 434/632 (68%), Gaps = 15/632 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I++T PD S + FP   + ++VA+SI   LAK  VA  ++G++ D SD +  +  ++IIT
Sbjct: 2   IQITLPDNSRREFPGPVSVAEVAQSIGPGLAKMTVAGKVDGRLVDASDVIDHDAKLQIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+D   L +IRHS AH++  AV+ ++P  ++ IGP+I++GFYYD   E+PF+ +++A IE
Sbjct: 62  PKDDEGLEIIRHSTAHLVGHAVKQLYPTAKMVIGPVIDEGFYYDISYERPFTPEDMAAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M+E+IA+D   +K+     +  E+F+S+ E YK+ ++E +P ++ + LY   E+ D+C
Sbjct: 122 ARMRELIAQDYDVVKKMTPRAEVIEVFKSRGEDYKLRLVEDMPDEQAMGLYYHQEYVDMC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +T +  K FKL K+AGAYWRGD+    L RIYGTAW  +++L QY+  +EE+EK
Sbjct: 182 RGPHVPNT-RFLKVFKLTKLAGAYWRGDAKNEQLQRIYGTAWADKKQLDQYIQRIEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +E+DLFHI E   GV+FWH KGW ++Q +  YMR   +D  Y E+  PQ+LD+
Sbjct: 241 RDHRKLGKELDLFHIDEVAPGVVFWHPKGWAVWQAVEQYMRGIYRDTGYWEVKGPQILDK 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+++GHW +YR NMF       T  + R +ALKPMNCPGHV +F   L+SYR+LP+R 
Sbjct: 301 SLWEKTGHWQNYRDNMFT------TESEKREYALKPMNCPGHVLIFKSDLRSYRDLPLRY 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG  +RNEPSG+LHG+MRVRGFTQDD H+FCT++Q+ +EC+     +  +Y DFGF  
Sbjct: 355 GEFGQCHRNEPSGALHGIMRVRGFTQDDGHIFCTEDQILDECIAYTEQLQKVYADFGFTD 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+ K++TRPE RVGSD LWD AE+    V+++++ S  D I   +  G+GAFYGPK EY 
Sbjct: 415 ILYKVATRPENRVGSDELWDKAEH---AVMESLRRSGVDFI---ISPGDGAFYGPKIEYT 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+DAIGR WQCGT+QVDFN   R    YV   S + HPVM+HRA+ GS+ERFIG++IE+ 
Sbjct: 469 LRDAIGRQWQCGTMQVDFNTAERLGGEYVTESSGRAHPVMLHRAIVGSLERFIGMLIEHH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G LP WL+P+Q  V  I+    +YA ++A  L++  L ++ D  NE I YKIR+HS++K
Sbjct: 529 SGALPAWLAPVQVAVLNISEGQADYAAQVAKTLQNQGLRVQLDLHNEKITYKIRKHSLQK 588

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           +P I++ GDKE    ++ +R  G+     +SL
Sbjct: 589 LPYILVVGDKEKEAGAVAVRARGNQDLGAMSL 620


>gi|296113663|ref|YP_003627601.1| threonyl-tRNA synthetase [Moraxella catarrhalis RH4]
 gi|295921357|gb|ADG61708.1| threonyl-tRNA synthetase [Moraxella catarrhalis RH4]
          Length = 639

 Score =  656 bits (1692), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 309/641 (48%), Positives = 432/641 (67%), Gaps = 15/641 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           + +T PDGSIK F  + T   VA+SI   LAK  VA  +NG++ D SDP+  + ++EIIT
Sbjct: 2   VAITLPDGSIKQFDGNTTVMQVAQSIGAGLAKATVAGRVNGRLVDASDPITTDATVEIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+D   + +IRHS AH++  AV+ ++P+V++ IGP+I+DGFYYD   E+PF+ D++A+IE
Sbjct: 62  PKDDAGVEIIRHSTAHLLGHAVKQLYPDVKMVIGPVIDDGFYYDIYSERPFTLDDMAKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M E+I +D   +K+    ++  + F  + E YK+ ++E +P + ++ LY   E+ D+C
Sbjct: 122 ARMTELINQDYDVIKKMTPRDEVIKTFLERGETYKLRLVEDMPDETHMGLYHHQEYIDMC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +T +  K FKL K++GAYWRGD+    L RIYGTAW  +++L  YL  LEE+EK
Sbjct: 182 RGPHVPNT-RFLKAFKLTKMSGAYWRGDAKNEQLQRIYGTAWADKKQLKAYLQRLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQ 302
           RDHRK+ + ++LFH+ E   G++FWH  GW I+Q L  YMR+  KD+ Y EI TPQ++D+
Sbjct: 241 RDHRKIGKALNLFHMQEQAPGMVFWHPNGWTIWQVLEQYMRKVQKDNGYLEIKTPQIVDR 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD+Y   MF       T  + R +A+KPMNCP HV VFN GLKSYR+LP+RL
Sbjct: 301 SLWEKSGHWDNYGEMMFT------TASEKRDYAIKPMNCPCHVQVFNQGLKSYRDLPLRL 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSGSLHG+MRVRGFTQDDAH+FCT  Q+  E L    L + +YKDFGF+ 
Sbjct: 355 AEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTNAQIRQEALNFIKLTLDVYKDFGFDH 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I +KLSTRPEKRVG+D LWD AE  +   LD         ++  +  GEGAFYGPK E+ 
Sbjct: 415 IQMKLSTRPEKRVGADELWDLAEQALADALDNAG------LDWELQAGEGAFYGPKIEFS 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+D IGR WQCGT+Q+DFNLP R +A +V    E+  PVM+HRA+ GS ERFIGI+IE++
Sbjct: 469 LQDCIGRVWQCGTLQLDFNLPERLDAEFVGESGERERPVMLHRAILGSFERFIGILIEHY 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P Q +V  IT    +   ++ + L +      +D RNE I +KIRE ++++
Sbjct: 529 AGLFPAWLAPQQVVVMNITDKQADSVGDVVSKLNAKGYRAISDLRNEKIGFKIRERTLER 588

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           IP ++I GDKE    ++ +R         ++L D I +L K
Sbjct: 589 IPFMLILGDKEVESGTVNVRTRTGENLGSMNLDDFIAVLDK 629


>gi|326572997|gb|EGE22976.1| threonyl-tRNA synthetase [Moraxella catarrhalis CO72]
          Length = 639

 Score =  655 bits (1691), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 309/641 (48%), Positives = 432/641 (67%), Gaps = 15/641 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           + +T PDGSIK F  + T   VA+SI   LAK  VA  +NG++ D SDP+  + ++EIIT
Sbjct: 2   VAITLPDGSIKQFDGNTTVMQVAQSIGAGLAKATVAGRVNGRLVDASDPITTDATVEIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+D   + +IRHS AH++  AV+ ++P+V++ IGP+I+DGFYYD   E+PF+ D++A+IE
Sbjct: 62  PKDDAGVEIIRHSTAHLLGHAVKQLYPDVKMVIGPVIDDGFYYDIYSERPFTLDDMAKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M ++I +D   +K+    ++  + F  + E YK+ ++E +P + ++ LY   E+ D+C
Sbjct: 122 ARMIQLINQDYDVIKKMTPRDEVIKTFLERGETYKLRLVEDMPDETHMGLYHHQEYIDMC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +T +  K FKL K++GAYWRGD+    L RIYGTAW  +++L  YL  LEE+EK
Sbjct: 182 RGPHVPNT-RFLKAFKLTKMSGAYWRGDAKNEQLQRIYGTAWADKKQLKAYLQRLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQ 302
           RDHRK+ + ++LFH+ E   G++FWH  GW I+Q L  YMR+  KD+ Y EI TPQ++D+
Sbjct: 241 RDHRKIGKALNLFHMQEQAPGMVFWHPNGWTIWQVLEQYMRKVQKDNGYLEIKTPQIVDR 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD+Y   MF       T  + R +A+KPMNCP HV VFN GLKSYR+LP+RL
Sbjct: 301 SLWEKSGHWDNYGEMMFT------TASEKRDYAIKPMNCPCHVQVFNQGLKSYRDLPLRL 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSGSLHG+MRVRGFTQDDAH+FCT  Q+  E L    L + +YKDFGF+ 
Sbjct: 355 AEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTNAQIRQEALNFIKLTLDVYKDFGFDH 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I +KLSTRPEKRVG+D LWD AE  +   LD         ++  +  GEGAFYGPK E+ 
Sbjct: 415 IQMKLSTRPEKRVGADELWDLAEQALADALDNAG------LDWELQAGEGAFYGPKIEFS 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+D IGR WQCGT+Q+DFNLP R +A +V    E+  PVM+HRA+ GS ERFIGI+IE++
Sbjct: 469 LQDCIGRVWQCGTLQLDFNLPERLDAEFVGESGERERPVMLHRAILGSFERFIGILIEHY 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P Q +V  IT    +   ++ + L +      +D RNE I +KIRE ++++
Sbjct: 529 AGLFPAWLAPQQVVVMNITDKQADSVGDVVSKLNAKGYRAISDLRNEKIGFKIRERTLER 588

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           IP ++I GDKE    ++ +R         +SL D I +L K
Sbjct: 589 IPFMLILGDKEVESGTVNVRTRTGDNLGSMSLDDFIAVLDK 629


>gi|33240514|ref|NP_875456.1| threonyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus
           str. CCMP1375]
 gi|73919816|sp|Q7VBM8|SYT_PROMA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|33238042|gb|AAQ00109.1| Threonyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus
           str. CCMP1375]
          Length = 643

 Score =  654 bits (1688), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 309/618 (50%), Positives = 427/618 (69%), Gaps = 15/618 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDG+ + +    T +++A  I   LAK A+A  +NG++ D   P+    +I IIT +
Sbjct: 4   ITLPDGAQRTYSTPVTIAEIAAEIGPGLAKAAIAGEVNGELVDTCIPISVNANINIITSK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           +   + +IRHS AH++  A++ ++P+ ++AIGP+IE+GFYYD   +  FS D+L QIE +
Sbjct: 64  NKEGIDIIRHSFAHLLGHAIKQLYPDAKMAIGPVIENGFYYDIAYKDTFSLDDLNQIELR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           ++E+I +D   + + +S EKAR+ F  + EAYKV+I++ IP  E + LY+  E+ D+CRG
Sbjct: 124 IKELIKQDYDVVVEEVSKEKARKTFLDRDEAYKVQIIDEIPDNETIKLYKHQEYIDMCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +T  ++ F  LMKV+GAYWRGDSN  ML RIYGTAW + +EL  YL  +EE+EKRD
Sbjct: 184 PHVPNTKHLRAF-SLMKVSGAYWRGDSNNEMLQRIYGTAWGSTKELEAYLLKIEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHL 304
           HRK+ +++DLFH  E+  G+IFWH KGW I+Q L S++R   I +DY+EI TPQ +D+ L
Sbjct: 243 HRKIGKKLDLFHTQEEAPGMIFWHPKGWSIYQVLESFIRETLILNDYKEIKTPQTVDRSL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHWD ++ +MF       T  + R +A+KPMNCP H+ VFN GLKSYR+LP+RLAE
Sbjct: 303 WEKSGHWDKFKEDMFT------TTSENREYAIKPMNCPCHIQVFNEGLKSYRDLPIRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNEPSG+LHGLMRVR F QDDAH+FCT+ Q+ +E  K  +L+  +YK FGFE I+
Sbjct: 357 FGSCHRNEPSGALHGLMRVRNFVQDDAHIFCTEAQIQDEVSKFIDLVFDVYKAFGFESII 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +KLSTRP KRVGSD +WD +E  +   L+  K           L GEGAFYGPK E+ LK
Sbjct: 417 IKLSTRPTKRVGSDEIWDKSEKALADALNIKK------FEWSYLPGEGAFYGPKIEFSLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D I R WQCGTIQVDF++P R  A Y++ +S+K  PVM+HRA+ GS ERFIGI+IE ++G
Sbjct: 471 DCIDRVWQCGTIQVDFSMPHRLGASYIDENSQKKVPVMLHRAILGSFERFIGILIEEYEG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P WLSPIQ IV  IT       +EI+NLL         D RNE +  KIREH++++IP
Sbjct: 531 KFPPWLSPIQVIVIGITDRNSIKCKEISNLLMLRGYRATYDTRNEKVGLKIREHTLQRIP 590

Query: 605 IIIICGDKEASERSIGIR 622
            ++I GDKE  E ++ +R
Sbjct: 591 YLLIIGDKEQEEGTVSVR 608


>gi|332968643|gb|EGK07696.1| threonine--tRNA ligase [Psychrobacter sp. 1501(2011)]
          Length = 644

 Score =  654 bits (1688), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 306/641 (47%), Positives = 437/641 (68%), Gaps = 15/641 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           + +T PDGS+K F    T   VAESI   LAK  VA  ++GK+ D SDP+  +  +EI+T
Sbjct: 2   VAITLPDGSVKEFDGATTVMQVAESIGPGLAKATVAGRVDGKLVDASDPITHDAKVEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+D   + +IRHSCAH++  AV+ ++P+V++ IGP+IE+GFYYD   E PF+ D+++ IE
Sbjct: 62  PKDADGVDIIRHSCAHLLGHAVKQLYPDVKMVIGPVIEEGFYYDIFSETPFTPDDMSAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M E+I ++   +K+    ++A  +F+ + E YK++++  +  ++   LY   E+ D+C
Sbjct: 122 KRMAELIKQNYDVIKKMTPRDEAIRIFKERNEDYKLKLINDMLEEKEFGLYFHQEYVDMC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +T +  K FKL K++GAYWRGD+    L RIYGTAW  +++L  Y+  +EE+EK
Sbjct: 182 RGPHVPNT-RFLKVFKLTKMSGAYWRGDAKNEQLQRIYGTAWADKKDLQAYITRMEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQ 302
           RDHRK+ R+++LFH+ E   G++FWH  GW I+Q L  YMR+  KD+ Y+EI TPQ++D+
Sbjct: 241 RDHRKIGRQLNLFHMQEQSPGMVFWHPNGWTIYQVLEQYMRKVQKDNGYQEIKTPQIVDR 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHW +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYRELP+RL
Sbjct: 301 SLWEKSGHWGNYATNMFT------TSSESRDYAVKPMNCPCHVQVFNQGLKSYRELPIRL 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+ Q+  E      L + +YKDFGF++
Sbjct: 355 AEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTQAQIQEEVANFIKLTLDVYKDFGFDQ 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I +KLSTRPEKRVG+D  WD AE  +   LD+        +    L GEGAFYGPK E+ 
Sbjct: 415 IDMKLSTRPEKRVGTDESWDIAEKALAEALDS------SGLEWEYLPGEGAFYGPKIEFS 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LKD++GR WQCGTIQVD N+P R +A +VN ++E+  P+M+HRA+ GS ERF+G++IE++
Sbjct: 469 LKDSLGRVWQCGTIQVDPNMPERLDAEFVNENNERETPIMLHRAILGSFERFLGMLIEHY 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G +P+WL+P Q +V  IT    E  Q +   L++  L   +D RNE I +KIRE ++++
Sbjct: 529 AGWMPVWLAPQQVVVMNITDKQSEACQNVVAELQNAGLRAISDLRNEKIGFKIRERTLER 588

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           IP +++ GDKE     + +R         +S+ D I ++ K
Sbjct: 589 IPYMLVLGDKEVESGQVNVRTREGENLGVMSVADFIELVQK 629


>gi|119476522|ref|ZP_01616873.1| threonyl-tRNA synthetase [marine gamma proteobacterium HTCC2143]
 gi|119450386|gb|EAW31621.1| threonyl-tRNA synthetase [marine gamma proteobacterium HTCC2143]
          Length = 645

 Score =  654 bits (1688), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 310/618 (50%), Positives = 429/618 (69%), Gaps = 15/618 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPE 65
           +T PDGS ++F    + +DVA  I   LAK A+A  + G++ D S  + E S + I+T  
Sbjct: 4   ITLPDGSQRSFDQPVSIADVAMDIGPGLAKAALAGKVAGELVDTSYIISENSELAIVTER 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHS AH+MA AVQ ++P VQV IGP+IEDG++YDF     FS+++L +IEK+
Sbjct: 64  DEEGLDLIRHSTAHLMAMAVQELFPGVQVTIGPVIEDGYFYDFATGHSFSTEDLQKIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M EI   D P  +  ++  +A + F    E YKV+I+E +PA + +++YRQG W DLCRG
Sbjct: 124 MLEITKDDLPIERMVMTRTQAIKEFREMGENYKVQIIEDLPAGDEISVYRQGPWRDLCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV STG++K F KLMKVAGAYWRGDSN  ML R+YGTAW+ +++L  YL+ LEE+EKRD
Sbjct: 184 PHVPSTGKLKAF-KLMKVAGAYWRGDSNNEMLQRVYGTAWSNKKDLKAYLHRLEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHL 304
           HRKL ++ DLFH+ E+  G++FWH KGW I+ T+ SYMR ++  ++Y+EI TPQ++D  L
Sbjct: 243 HRKLGKKYDLFHMQEEAPGMVFWHPKGWSIYTTIESYMREQQTLNNYQEIKTPQLVDFSL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           WQ+SGH D +  +MF ++       D R FA+KPMNCP HV +FN GLKSYR+LP+RLAE
Sbjct: 303 WQKSGHADKFGDDMFTLEA------DGRDFAIKPMNCPCHVQIFNQGLKSYRDLPLRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNEPSGSLHG+MRVRGF QDDAH+F T+ Q+  E     + + S+Y+DFGF  ++
Sbjct: 357 FGSCHRNEPSGSLHGIMRVRGFVQDDAHIFATENQIQPEVSVFIDFLHSVYEDFGFSDVI 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
            +LSTRPE+RVG+D  WD AE  +   L++     ++      L GEGAFYGPK E+ LK
Sbjct: 417 YRLSTRPEQRVGTDESWDKAEKALADALNSKGLPWEE------LPGEGAFYGPKIEFSLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D IGR WQ GTIQVDF++P R +A YV     +  PVM+HRA+ GS ERFIGI+IE+++G
Sbjct: 471 DCIGRVWQLGTIQVDFSMPGRLDAQYVAEDGSRQTPVMLHRAILGSFERFIGILIEHYEG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P WL+P Q ++  IT     Y +++   LK+  + ++ D RNE I +KIREH I+K+P
Sbjct: 531 AFPTWLAPTQVVIANITDKQAPYVKKVHQSLKNSGIRVDADLRNEKIGFKIREHIIQKVP 590

Query: 605 IIIICGDKEASERSIGIR 622
            +++ GDKE   +++ +R
Sbjct: 591 YLLVVGDKEIENQTVAVR 608


>gi|326574765|gb|EGE24699.1| threonyl-tRNA synthetase [Moraxella catarrhalis O35E]
          Length = 639

 Score =  654 bits (1688), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 309/639 (48%), Positives = 431/639 (67%), Gaps = 15/639 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           + +T PDGSIK F  + T   VA+SI   LAK  VA  +NG++ D SDP+  + ++EIIT
Sbjct: 2   VAITLPDGSIKQFDGNTTVMQVAQSIGAGLAKATVAGRVNGRLVDASDPITTDATVEIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+D   + +IRHS AH++  AV+ ++P+V++ IGP+I+DGFYYD   E+PF+ D++A+IE
Sbjct: 62  PKDDAGVEIIRHSTAHLLGHAVKQLYPDVKMVIGPVIDDGFYYDIYSERPFTLDDMAKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M ++I +D   +K+    ++  + F  + E YK+ ++E +P + ++ LY   E+ D+C
Sbjct: 122 ARMIQLINQDYDVIKKMTPRDEVIKTFLERGETYKLRLVEDMPDETHMGLYHHQEYIDMC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +T +  K FKL K++GAYWRGD+    L RIYGTAW  +++L  YL  LEE+EK
Sbjct: 182 RGPHVPNT-RFLKAFKLTKMSGAYWRGDAKNEQLQRIYGTAWADKKQLKAYLQRLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQ 302
           RDHRK+ + ++LFH+ E   G++FWH  GW I+Q L  YMR+  KD+ Y EI TPQ++D+
Sbjct: 241 RDHRKIGKALNLFHMQEQAPGMVFWHPNGWTIWQVLEQYMRKVQKDNGYLEIKTPQIVDR 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD+Y   MF       T  + R +A+KPMNCP HV VFN GLKSYR+LP+RL
Sbjct: 301 SLWEKSGHWDNYGEMMFT------TASEKRDYAIKPMNCPCHVQVFNQGLKSYRDLPLRL 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSGSLHG+MRVRGFTQDDAH+FCT  Q+  E L    L + +YKDFGF+ 
Sbjct: 355 AEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTNAQIRQEALNFIKLTLDVYKDFGFDH 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I +KLSTRPEKRVG+D LWD AE  +   LD         ++  +  GEGAFYGPK E+ 
Sbjct: 415 IQMKLSTRPEKRVGADELWDLAEQALADALDNAG------LDWELQAGEGAFYGPKIEFS 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+D IGR WQCGT+Q+DFNLP R NA +V    E+  PVM+HRA+ GS ERFIGI+IE++
Sbjct: 469 LQDCIGRVWQCGTLQLDFNLPERLNAEFVGESGERERPVMLHRAILGSFERFIGILIEHY 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P Q +V  IT    +   ++ + L +      +D RNE I +KIRE ++++
Sbjct: 529 AGLFPTWLAPQQVVVMNITDKQADSVGDVVSKLNAKGYRAISDLRNEKIGFKIRERTLER 588

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           IP ++I GDKE    ++ +R         ++L D I IL
Sbjct: 589 IPFMLILGDKEVESGTVNVRTRTGDNLGSMNLDDFIKIL 627


>gi|326562776|gb|EGE13071.1| threonyl-tRNA synthetase [Moraxella catarrhalis 46P47B1]
 gi|326563180|gb|EGE13448.1| threonyl-tRNA synthetase [Moraxella catarrhalis 12P80B1]
          Length = 639

 Score =  654 bits (1687), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 308/641 (48%), Positives = 433/641 (67%), Gaps = 15/641 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           + +T PDGSIK F  + T   VA+SI   LAK  VA  +NG++ D SDP+  + ++EIIT
Sbjct: 2   VAITLPDGSIKQFDGNTTVMQVAQSIGAGLAKATVAGRVNGRLVDASDPITTDATVEIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+D   + +IRHS AH++  AV+ ++P+V++ IGP+I+DGFYYD   E+PF+ D++A+IE
Sbjct: 62  PKDDAGVEIIRHSTAHLLGHAVKQLYPDVKMVIGPVIDDGFYYDIYSERPFTLDDMAKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M ++I +D   +K+    ++  + F  + E YK+ ++E +P + ++ LY   E+ D+C
Sbjct: 122 ARMIQLINQDYDVIKKMTPRDEVIKTFLERGETYKLRLVEDMPDETHMGLYHHQEYIDMC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +T +  K FKL K++GAYWRGD+    L RIYGTAW  +++L  YL  LEE+EK
Sbjct: 182 RGPHVPNT-RFLKAFKLTKMSGAYWRGDAKNEQLQRIYGTAWADKKQLKAYLQRLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQ 302
           RDHRK+ + ++LFH+ E   G++FWH  GW I+Q L  YMR+  KD+ Y EI TPQ++D+
Sbjct: 241 RDHRKIGKALNLFHMQEQAPGMVFWHPNGWTIWQVLEQYMRKVQKDNGYLEIKTPQIVDR 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD+Y   MF       T  + R +A+KPMNCP HV VFN GLKSYR+LP+RL
Sbjct: 301 SLWEKSGHWDNYGEMMFT------TASEKRDYAIKPMNCPCHVQVFNQGLKSYRDLPLRL 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSGSLHG+MRVRGFTQDDAH+FCT  Q+ +E L    L + +YKDFGF+ 
Sbjct: 355 AEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTNAQIRSEALNFIKLTLDVYKDFGFDH 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I +KLSTRPEKRVG+D LWD AE  +   LD         ++  +  GEGAFYGPK E+ 
Sbjct: 415 IQMKLSTRPEKRVGADELWDLAEQALADALDNAG------LDWELQAGEGAFYGPKIEFS 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+D IGR WQCGT+Q+DFNLP R +A +V    E+  PVM+HRA+ GS ERFIGI+IE++
Sbjct: 469 LQDCIGRVWQCGTLQLDFNLPERLDAEFVGESGERERPVMLHRAILGSFERFIGILIEHY 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P Q +V  IT    +   ++ + L +      +D RNE I +KIRE ++++
Sbjct: 529 AGLFPAWLAPQQVVVMNITDKQADSVGDVVSKLNAKGYRAISDLRNEKIGFKIRERTLER 588

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           IP ++I GDKE    ++ +R         ++L D I +L K
Sbjct: 589 IPFMLILGDKEVESGTVNVRTRTGDNLGSMNLDDFIAVLDK 629


>gi|326563502|gb|EGE13765.1| threonyl-tRNA synthetase [Moraxella catarrhalis 103P14B1]
 gi|326573810|gb|EGE23767.1| threonyl-tRNA synthetase [Moraxella catarrhalis 101P30B1]
          Length = 639

 Score =  654 bits (1687), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 308/641 (48%), Positives = 432/641 (67%), Gaps = 15/641 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           + +T PDGSIK F  + T   VA+SI   LAK  VA  +NG++ D SDP+  + ++EIIT
Sbjct: 2   VAITLPDGSIKQFDGNTTVMQVAQSIGAGLAKATVAGRVNGRLVDASDPITTDATVEIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+D   + +IRHS AH++  AV+ ++P+V++ IGP+I+DGFYYD   E+PF+ D++A+IE
Sbjct: 62  PKDDAGVEIIRHSTAHLLGHAVKQLYPDVKMVIGPVIDDGFYYDIYSERPFTLDDMAKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M ++I +D   +K+    ++  + F  + E YK+ ++E +P + ++ LY   E+ D+C
Sbjct: 122 ARMIQLINQDYDVIKKMTPRDEVIKTFLERGETYKLRLVEDMPDETHMGLYHHQEYIDMC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +T +  K FKL K++GAYWRGD+    L RIYGTAW  +++L  YL  LEE+EK
Sbjct: 182 RGPHVPNT-RFLKAFKLTKMSGAYWRGDAKNEQLQRIYGTAWADKKQLKAYLQRLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQ 302
           RDHRK+ + ++LFH+ E   G++FWH  GW I+Q L  YMR+  KD+ Y EI TPQ++D+
Sbjct: 241 RDHRKIGKALNLFHMQEQAPGMVFWHPNGWTIWQVLEQYMRKVQKDNGYLEIKTPQIVDR 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD+Y   MF       T  + R +A+KPMNCP HV VFN GLKSYR+LP+RL
Sbjct: 301 SLWEKSGHWDNYGEMMFT------TASEKRDYAIKPMNCPCHVQVFNQGLKSYRDLPLRL 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSGSLHG+MRVRGFTQDDAH+FCT  Q+  E L    L + +YKDFGF+ 
Sbjct: 355 AEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTNAQIRQEALNFIKLTLDVYKDFGFDH 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I +KLSTRPEKRVG+D LWD AE  +   LD         ++  +  GEGAFYGPK E+ 
Sbjct: 415 IQMKLSTRPEKRVGADELWDLAEQALADALDNAG------LDWELQAGEGAFYGPKIEFS 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+D IGR WQCGT+Q+DFNLP R +A +V    E+  PVM+HRA+ GS ERFIGI+IE++
Sbjct: 469 LQDCIGRVWQCGTLQLDFNLPERLDAEFVGESGERERPVMLHRAILGSFERFIGILIEHY 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P Q +V  IT    +   ++ + L +      +D RNE I +KIRE ++++
Sbjct: 529 AGLFPAWLAPQQVVVMNITDKQADSVGDVVSKLNAKGYRAISDLRNEKIGFKIRERTLER 588

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           IP ++I GDKE    ++ +R         ++L D I +L K
Sbjct: 589 IPFMLILGDKEVESGTVNVRTRTGENLGSMNLDDFIAVLDK 629


>gi|237801015|ref|ZP_04589476.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331023872|gb|EGI03929.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 640

 Score =  654 bits (1686), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 303/642 (47%), Positives = 441/642 (68%), Gaps = 24/642 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP+   +T PDGS ++F    + +DVA SI   LAK  VA  ++GK+ D  D +  + S+
Sbjct: 1   MPT---ITLPDGSQRSFDHAVSVADVALSIGAGLAKATVAGKVDGKLVDACDLIENDASL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           +IITP+D   L +IRHSCAH++  AV+ ++P  ++ IGP+I+DGFYYD   E+PF+ D++
Sbjct: 58  QIITPKDQEGLEIIRHSCAHLVGHAVKQLYPTAKMVIGPVIDDGFYYDIAYERPFTPDDM 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A IE++MQ++I +D   +K+     +  E+F ++ E YK+ ++E +P ++ + LY   E+
Sbjct: 118 AAIEQRMQQLIEKDYDVIKKVTPRAEVIEVFTARHEDYKLRLVEDMPNEQAMGLYYHEEY 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            D+CRGPHV +T +  K FKL K++GAYWRGD+    L RIYGTAW  +++L  Y+  +E
Sbjct: 178 VDMCRGPHVPNT-RFLKSFKLTKLSGAYWRGDAKNEQLQRIYGTAWADKKQLAAYILRIE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQ 298
           E+EKRDHRK+ + + LFH  E+  G++FWH +GW ++Q L  YMR+  +++ Y EI TPQ
Sbjct: 237 EAEKRDHRKIGKRLGLFHTQEEAPGMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHW +Y  NMF  +  +      R +A+KPMNCP HV VFN GLKSYREL
Sbjct: 297 VVDRSLWEKSGHWANYADNMFTTESEN------RDYAIKPMNCPCHVQVFNQGLKSYREL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFG+ +RNEPSG+LHG+MRVRGFTQDDAH+FCT++QM  E      L + +Y DF
Sbjct: 351 PMRLAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEDQMQAESAAFIKLTLDVYADF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+ I +KLSTRPEKRVGSD LWD AE+ +   LD+        +   +  GEGAFYGPK
Sbjct: 411 GFKDIELKLSTRPEKRVGSDELWDRAESALASALDSAG------LPYDLQPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD +GR WQCGT+Q+DFNLP R NA YV+  + + +PVM+HRA+ GS ERFIGI+
Sbjct: 465 IEFSLKDCLGRVWQCGTLQLDFNLPIRLNAEYVSEDNSRKNPVMLHRAILGSFERFIGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+++G  P WL+P QA++  IT    ++A E+   L       ++D RNE I +KIREH
Sbjct: 525 IEHYEGAFPAWLAPTQAVIMNITDKQADFALEVEKTLAESGFRAKSDLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
           ++ K+P +++ GD+E   +++ +R      T++ + L ++P+
Sbjct: 585 TLLKVPYLLVIGDREVEMQTVAVR------TREGADLGSMPV 620


>gi|326562407|gb|EGE12726.1| threonyl-tRNA synthetase [Moraxella catarrhalis 7169]
 gi|326569116|gb|EGE19178.1| threonyl-tRNA synthetase [Moraxella catarrhalis BC1]
          Length = 639

 Score =  653 bits (1685), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 308/641 (48%), Positives = 431/641 (67%), Gaps = 15/641 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           + +T PDGSIK F  + T   VA+SI   LAK  VA  +NG++ D SDP+  + ++EIIT
Sbjct: 2   VAITLPDGSIKQFDGNTTVMQVAQSIGAGLAKATVAGRVNGRLVDASDPITTDATVEIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+D   + +IRHS AH++  AV+ ++P+V++ IGP+I+DGFYYD   E+PF+  ++A+IE
Sbjct: 62  PKDDAGVEIIRHSTAHLLGHAVKQLYPDVKMVIGPVIDDGFYYDIYSERPFTLGDMAKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M ++I +D   +K+    ++  + F  + E YK+ ++E +P + ++ LY   E+ D+C
Sbjct: 122 ARMIQLINQDYDVIKKMTPRDEVIKTFLERGETYKLRLVEDMPDETHMGLYHHQEYIDMC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +T +  K FKL K++GAYWRGD+    L RIYGTAW  +++L  YL  LEE+EK
Sbjct: 182 RGPHVPNT-RFLKAFKLTKMSGAYWRGDAKNEQLQRIYGTAWADKKQLKAYLQRLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQ 302
           RDHRK+ + ++LFH+ E   G++FWH  GW I+Q L  YMR+  KD+ Y EI TPQ++D+
Sbjct: 241 RDHRKIGKALNLFHMQEQAPGMVFWHPNGWTIWQVLEQYMRKVQKDNGYLEIKTPQIVDR 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD+Y   MF       T  + R +A+KPMNCP HV VFN GLKSYR+LP+RL
Sbjct: 301 SLWEKSGHWDNYGEMMFT------TASEKRDYAIKPMNCPCHVQVFNQGLKSYRDLPLRL 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSGSLHG+MRVRGFTQDDAH+FCT  Q+  E L    L + +YKDFGF+ 
Sbjct: 355 AEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTNAQIRQEALNFIKLTLDVYKDFGFDH 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I +KLSTRPEKRVG+D LWD AE  +   LD         ++  +  GEGAFYGPK E+ 
Sbjct: 415 IQMKLSTRPEKRVGADELWDLAEQALADALDNAG------LDWELQAGEGAFYGPKIEFS 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+D IGR WQCGT+Q+DFNLP R +A +V    E+  PVM+HRA+ GS ERFIGI+IE++
Sbjct: 469 LQDCIGRVWQCGTLQLDFNLPERLDAEFVGESGERERPVMLHRAILGSFERFIGILIEHY 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P Q +V  IT    +   ++ + L +      +D RNE I +KIRE ++++
Sbjct: 529 AGLFPAWLAPQQVVVMNITDKQADSVGDVVSKLNAKGYRAISDLRNEKIGFKIRERTLER 588

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           IP ++I GDKE    ++ +R         +SL D I +L K
Sbjct: 589 IPFMLILGDKEVESGTVNVRTRAGENLGSMSLDDFIAVLDK 629


>gi|239814876|ref|YP_002943786.1| threonyl-tRNA synthetase [Variovorax paradoxus S110]
 gi|259516786|sp|C5CUU2|SYT_VARPS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|239801453|gb|ACS18520.1| threonyl-tRNA synthetase [Variovorax paradoxus S110]
          Length = 635

 Score =  653 bits (1685), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 302/632 (47%), Positives = 431/632 (68%), Gaps = 15/632 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I++T PD S + FP   + ++VA+SI   LAK  VA  ++GK+ D SD +  +  ++IIT
Sbjct: 2   IQITLPDNSRREFPGPVSVAEVAQSIGPGLAKMTVAGKVDGKLVDASDVIDHDARLQIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P D   L +IRHS AH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A IE
Sbjct: 62  PRDDEGLEIIRHSTAHLVGHAVKQLYPTAKMVIGPVIEEGFYYDISYERPFTPEDMAAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M+E+IA+D   +K+     +  E+F+S+ E YK+ ++E +P ++ + LY   E+ D+C
Sbjct: 122 ARMRELIAQDYDVVKKMTPRAEVIEVFKSRGEDYKLRLVEDMPDEQAMGLYYHQEYVDMC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +T +  K FKL K+AGAYWRGD+    L RIYGTAW  +++L QY+  +EE+EK
Sbjct: 182 RGPHVPNT-RFLKVFKLTKLAGAYWRGDAKNEQLQRIYGTAWADKKQLDQYIQRIEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +E+DLFHI E   GV+FWH KGW ++Q +  YMR   +D  Y E+  PQ+LD+
Sbjct: 241 RDHRKLGKELDLFHIDEVAPGVVFWHPKGWALWQAVEQYMRGIYRDTGYWEVKGPQILDK 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+++GHW +YR NMF       T  + R +ALKPMNCPGHV +F   L+SYR+LP+R 
Sbjct: 301 SLWEKTGHWQNYRDNMFT------TESEKREYALKPMNCPGHVLIFKSDLRSYRDLPLRY 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG  +RNEPSG+LHG+MRVRGFTQDD H+FCT++Q+  EC+     +  +Y DFGF +
Sbjct: 355 GEFGQCHRNEPSGALHGIMRVRGFTQDDGHIFCTEDQILEECVAYTAQLQKVYADFGFTE 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+ K++TRP+ RVGSD LWD AE+    V++ ++ S  D I   +  G+GAFYGPK EY 
Sbjct: 415 ILYKVATRPDNRVGSDELWDKAEH---AVMEALRRSGVDFI---ISPGDGAFYGPKIEYT 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LKDA+GR WQCGT+QVDFN   R    YV   S + HPVM+HRA+ GS+ERFIG++IE+ 
Sbjct: 469 LKDALGRQWQCGTMQVDFNTAERLGGEYVTETSGRAHPVMLHRAIVGSLERFIGMLIEHH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G LP WL+P+Q  V  I+    +YA  +A  L++  L ++ D  NE I YKIR+HS++K
Sbjct: 529 AGALPAWLAPVQVAVLNISEGQADYAASVAKTLQNQGLRVQLDLHNEKITYKIRKHSLQK 588

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           +P I++ GDKE    ++ +R  G+     +SL
Sbjct: 589 LPYILVVGDKEREAGAVAVRARGNQDLGAMSL 620


>gi|330958898|gb|EGH59158.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. maculicola str.
           ES4326]
          Length = 640

 Score =  653 bits (1684), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 304/642 (47%), Positives = 442/642 (68%), Gaps = 24/642 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP+   +T PDGS ++F    + +DVA SI   LAK  VA  +NGK+ D  D +  + S+
Sbjct: 1   MPT---ITLPDGSQRSFDHAVSVADVALSIGAGLAKATVAGKVNGKLVDACDLIENDASL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           +IITP+D   L +IRHSCAH++  AV+ ++P  ++ IGP+I+DGFYYD   E+PF+ D++
Sbjct: 58  QIITPKDQEGLEIIRHSCAHLVGHAVKQLYPTAKMVIGPVIDDGFYYDIAYERPFTPDDM 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A IE++MQ++I +D   +K+     +  E+F ++ E YK+ ++E +P ++ + LY   E+
Sbjct: 118 AAIEQRMQQLIEKDYDVIKKVTPRAEVIEVFTARHEDYKLRLVEDMPNEQAMGLYYHEEY 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            D+CRGPHV +T +  K FKL K++GAYWRGD+    L RIYGTAW  +++L  Y+  +E
Sbjct: 178 VDMCRGPHVPNT-RFLKSFKLTKLSGAYWRGDAKNEQLQRIYGTAWADKKQLAAYIQRIE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQ 298
           E+EKRDHRK+ + + LFH  E+  G++FWH +GW ++Q L  YMR+  +++ Y EI TPQ
Sbjct: 237 EAEKRDHRKIGKRLGLFHTQEEAPGMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHW +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYREL
Sbjct: 297 VVDRSLWEKSGHWANYADNMFT------TESESRDYAIKPMNCPCHVQVFNQGLKSYREL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFG+ +RNEPSG+LHG+MRVRGFTQDDAH+FCT++QM  E      L +++Y DF
Sbjct: 351 PMRLAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEDQMQAESAAFIKLTLAVYADF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+ I +KLSTRPEKRVGSD LWD AE+ +   LD+        +   +  GEGAFYGPK
Sbjct: 411 GFKDIELKLSTRPEKRVGSDELWDRAESALASALDSAG------LPYDLQPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD +GR WQCGT+Q+DFNLP R +A YV+  + + +PVM+HRA+ GS ERFIGI+
Sbjct: 465 IEFSLKDCLGRVWQCGTLQLDFNLPIRLSAEYVSEDNSRKNPVMLHRAILGSFERFIGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+++G  P WL+P QA++  IT    ++A E+   L       ++D RNE I +KIREH
Sbjct: 525 IEHYEGAFPAWLAPTQAVIMNITDKQADFALEVEKTLAESGFRAKSDLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
           ++ K+P +++ GD+E   +++ +R      T++ + L ++P+
Sbjct: 585 TLLKVPYLLVIGDREVEMQTVAVR------TREGADLGSMPV 620


>gi|72381873|ref|YP_291228.1| threonyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A]
 gi|123759915|sp|Q46LV3|SYT_PROMT RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|72001723|gb|AAZ57525.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Prochlorococcus
           marinus str. NATL2A]
          Length = 641

 Score =  652 bits (1683), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 310/642 (48%), Positives = 433/642 (67%), Gaps = 16/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPE 65
           +T PDG+ K +    T   +A  I   LAK A+A  +NG++ D   P+ + S I+IIT +
Sbjct: 4   ITLPDGTEKKYDSAVTIDQIASEIGPGLAKAALAGRVNGELIDTCIPITQNSHIQIITSK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHS AH++  AV+ ++PE ++AIGP+IEDGFYYD   +  F+ D+L +IEK+
Sbjct: 64  DDEGLEIIRHSFAHLLGHAVKQLYPEAKMAIGPVIEDGFYYDISYKDTFTPDDLLKIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+E++ RD     + +S EKA+E+F  + E +K++I+++IP  E + LY+  E+ D+CRG
Sbjct: 124 MKELVNRDYSVGVEIVSPEKAKEVFTDRGEIFKLDIVKNIPKNEIIKLYKHQEYIDMCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +T  ++ F KLMKV+GAYWRGDSN  ML RIYGTAW + +EL +YL  +EE+EKRD
Sbjct: 184 PHVPNTRHLRAF-KLMKVSGAYWRGDSNNEMLQRIYGTAWKSSKELKEYLSRIEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHL 304
           HRKL ++  LFH  E+  G++FWH KGW I++ L  ++R  I K DY+E+ +PQV+D+ L
Sbjct: 243 HRKLGKKYSLFHSQEEAPGMVFWHPKGWTIYRILEDFIRETITKYDYQEVKSPQVVDRSL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHWD ++ +MF       T  + R +A+KPMNCP H+ +FN GLKSYR+LP+RL+E
Sbjct: 303 WEKSGHWDKFKEDMFT------TTSENREYAIKPMNCPCHIQIFNQGLKSYRDLPIRLSE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNEPSG+LHGLMRVR F QDDAH+FCT EQ+  E     +L+  +YK FGF+ I+
Sbjct: 357 FGSCHRNEPSGALHGLMRVRNFVQDDAHIFCTDEQIQEEVQNFIDLVFEVYKTFGFDSIL 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +KLSTRP KRVGSD +WD +E  +   LD+        ++  +L GEGAFYGPK E+ LK
Sbjct: 417 IKLSTRPVKRVGSDDIWDKSEKALSEALDS------KGLDWSLLPGEGAFYGPKIEFSLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D + R WQCGTIQVDF++P R NA Y++    K  PVM+HRA+ GS ERFIGI+IEN+ G
Sbjct: 471 DCLNRVWQCGTIQVDFSMPQRLNASYIDITGRKQTPVMLHRAILGSFERFIGILIENYSG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
           N P WLSPIQ ++  IT    E      + L       E D RNE + +KIREH++++IP
Sbjct: 531 NFPTWLSPIQIMIMGITDRNNEACFTAKDKLVDFGFRAEIDIRNEKVGFKIREHTMQRIP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
            +II GDKE     I +R         +S +D   ++  ES+
Sbjct: 591 FLIIIGDKEEENSEISVRTREGKDLGNMS-IDKFKLIIDESI 631


>gi|66045402|ref|YP_235243.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. syringae B728a]
 gi|75502334|sp|Q4ZUG7|SYT_PSEU2 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|63256109|gb|AAY37205.1| Threonyl-tRNA synthetase, class IIa [Pseudomonas syringae pv.
           syringae B728a]
          Length = 640

 Score =  652 bits (1683), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 302/642 (47%), Positives = 442/642 (68%), Gaps = 24/642 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP+   +T PDGS ++F    + +DVA SI   LAK  VA  ++GK+ D  D +  + S+
Sbjct: 1   MPT---ITLPDGSQRSFDQAVSVADVALSIGAGLAKATVAGKVDGKLVDACDLIENDASL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           +IITP+D   L +IRHSCAH++  AV+ ++P  ++ IGP+I+DGFYYD   E+PF+ D++
Sbjct: 58  QIITPKDQEGLEIIRHSCAHLVGHAVKQLYPTAKMVIGPVIDDGFYYDIAYERPFTPDDM 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A IE++MQ++I +D   +K+     +  E+F ++ E YK+ ++E +P+++ + LY   E+
Sbjct: 118 AAIEQRMQQLIEKDYDVIKKVTPRAEVIEVFTARHEDYKLRLVEDMPSEQAMGLYYHEEY 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            D+CRGPHV +T +  K FKL K++GAYWRGD+    L R+YGTAW  +++L  Y+  +E
Sbjct: 178 VDMCRGPHVPNT-RFLKSFKLTKLSGAYWRGDAKNEQLQRVYGTAWADKKQLAAYIQRIE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQ 298
           E+EKRDHRK+ + + LFH  E+  G++FWH +GW ++Q L  YMR+  +++ Y EI TPQ
Sbjct: 237 EAEKRDHRKIGKRLGLFHTQEEAPGMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHW +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYREL
Sbjct: 297 VVDRSLWEKSGHWANYADNMFT------TESESRDYAIKPMNCPCHVQVFNQGLKSYREL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFG+ +RNEPSG+LHG+MRVRGFTQDDAH+FCT++QM  E      L + +Y DF
Sbjct: 351 PMRLAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEDQMQAESAAFIKLTLDVYADF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+ I +KLSTRPEKRVGSD LWD AE+ +   LD+        +   +  GEGAFYGPK
Sbjct: 411 GFKDIELKLSTRPEKRVGSDELWDRAESALASALDSAG------LPYDLQPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD +GR WQCGT+Q+DFNLP R +A YV+  + + +PVM+HRA+ GS ERFIGI+
Sbjct: 465 IEFSLKDCLGRVWQCGTLQLDFNLPIRLSAEYVSEDNSRKNPVMLHRAILGSFERFIGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+++G  P WL+P QA++  IT    ++A E+   L       ++D RNE I +KIREH
Sbjct: 525 IEHYEGAFPAWLAPTQAVIMNITDKQADFALEVEKTLAESGFRAKSDLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
           ++ K+P +++ GD+E   +++ +R      T++ + L ++P+
Sbjct: 585 TLLKVPYLLVIGDREVEMQTVAVR------TREGADLGSMPV 620


>gi|257455909|ref|ZP_05621126.1| threonyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
 gi|257446655|gb|EEV21681.1| threonyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
          Length = 642

 Score =  652 bits (1682), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 301/620 (48%), Positives = 429/620 (69%), Gaps = 15/620 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           + +T P+G IK F    +  +VA+SI   LAK  VA  +NGK+ D  DP+ E  S++IIT
Sbjct: 2   VAITLPNGDIKQFDGQTSVMEVAQSIGAGLAKATVAGRVNGKLVDACDPISEDASVQIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+D   + +IRHS AH++  AV+ ++PEV++ IGP+IE+GFYYD   E+PF+ +++ +IE
Sbjct: 62  PKDEEGVEIIRHSTAHLLGHAVKQLYPEVKMVIGPVIEEGFYYDIYSERPFTPEDMEKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M ++I +D   +K+    ++  ++F+ + E YK+ ++E +P +  + LY   E+ D+C
Sbjct: 122 ARMTQLINQDYDVIKKMTPRDEVIKVFQDRGETYKLRLIEDMPNETQMGLYYHQEYVDMC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +T +  K FKL K++GAYWRGD+    L RIYGTAW  +++L  Y+  +EE+EK
Sbjct: 182 RGPHVPNT-RFLKAFKLTKMSGAYWRGDAKNEQLQRIYGTAWADKKDLKAYIQRIEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQ 302
           RDHRK+ + +DLFH+ E+  G++FWH  GW ++Q L  YMR+  KD+ Y EI TPQ++D+
Sbjct: 241 RDHRKIGKALDLFHMQEEAPGMVFWHPNGWTMWQVLEQYMRKVQKDNGYLEIKTPQIVDR 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHW++Y   MF       T  + R +A+KPMNCP HV VFN GLKSYR+LP+RL
Sbjct: 301 SLWEKSGHWENYGDMMFT------THSEKRDYAIKPMNCPCHVQVFNQGLKSYRDLPLRL 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSGSLHG+MRVRGFTQDDAH+FC+ EQ+  E      L + +YKDFGF+ 
Sbjct: 355 AEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCSNEQIKQEAQDFIKLTLDVYKDFGFDD 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + +KLSTRPEKRVG+D LWD AE   K + D + N+    ++   L GEGAFYGPK E+ 
Sbjct: 415 VQMKLSTRPEKRVGADELWDLAE---KDLADALDNAG---LDWQYLPGEGAFYGPKIEFS 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LKD +GR WQCGT+Q+DFNLP R  A +VN   E+  PVM+HRA+ GS ERFIG++IE++
Sbjct: 469 LKDCLGRVWQCGTLQLDFNLPERLGAEFVNEQGERERPVMLHRAILGSFERFIGMLIEHY 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G +P+WL+P Q +V  IT +     Q++A  L    L + TD RNE I +KIRE ++++
Sbjct: 529 AGWMPVWLAPQQVVVMNITDNQAPACQKVAEQLNQAGLRVITDLRNEKIGFKIRERTLER 588

Query: 603 IPIIIICGDKEASERSIGIR 622
           IP +I+ GDKE     + +R
Sbjct: 589 IPYMIVMGDKEVESNQVNVR 608


>gi|28869575|ref|NP_792194.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|213970495|ref|ZP_03398622.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. tomato T1]
 gi|301384174|ref|ZP_07232592.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. tomato Max13]
 gi|302132643|ref|ZP_07258633.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. tomato NCPPB
           1108]
 gi|38258312|sp|Q883H9|SYT_PSESM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|28852817|gb|AAO55889.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|213924666|gb|EEB58234.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. tomato T1]
 gi|330876789|gb|EGH10938.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. morsprunorum
           str. M302280PT]
 gi|331016139|gb|EGH96195.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str.
           M302278PT]
          Length = 640

 Score =  652 bits (1682), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 303/642 (47%), Positives = 441/642 (68%), Gaps = 24/642 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP+   +T PDGS ++F    + +DVA SI   LAK  VA  ++GK+ D  D +  + S+
Sbjct: 1   MPT---ITLPDGSQRSFDHAVSVADVALSIGAGLAKATVAGKVDGKLVDACDLIENDASL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           +IITP+D   L +IRHSCAH++  AV+ ++P  ++ IGP+I+DGFYYD   E+PF+ D+L
Sbjct: 58  QIITPKDAEGLEIIRHSCAHLVGHAVKQLYPTAKMVIGPVIDDGFYYDIAYERPFTPDDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A IE++MQ++I +D   +K+     +  E+F ++ E YK+ ++E +P ++ + LY   E+
Sbjct: 118 AAIEQRMQQLIEKDYDVIKKVTPRAEVIEVFTARHEDYKLRLVEGMPDEQAMGLYYHEEY 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            D+CRGPHV +T +  K FKL K++GAYWRGD+    L R+YGTAW  +++L  Y+  +E
Sbjct: 178 VDMCRGPHVPNT-RFLKSFKLTKLSGAYWRGDAKNEQLQRVYGTAWADKKQLAAYIQRIE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQ 298
           E+EKRDHRK+ + + LFH  E+  G++FWH +GW ++Q L  YMR+  +++ Y EI TPQ
Sbjct: 237 EAEKRDHRKIGKRLGLFHTQEEAPGMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHW +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYREL
Sbjct: 297 VVDRSLWEKSGHWANYADNMFT------TQSESRDYAIKPMNCPCHVQVFNQGLKSYREL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFG+ +RNEPSG+LHG+MRVRGFTQDDAH+FCT++QM  E      L + +Y DF
Sbjct: 351 PLRLAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEDQMQAESAAFIKLTLDVYADF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+ I +KLSTRPEKRVGSD LWD AE+ +   LD+        +   +  GEGAFYGPK
Sbjct: 411 GFKDIELKLSTRPEKRVGSDELWDRAESALASALDSAG------LPYDLQPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD +GR WQCGT+Q+DFNLP R +A YV+  + + +PVM+HRA+ GS ERFIGI+
Sbjct: 465 IEFSLKDCLGRVWQCGTLQLDFNLPIRLSAEYVSEDNSRKNPVMLHRAILGSFERFIGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+++G  P WL+P QA++  IT    ++A E+   L       ++D RNE I +KIREH
Sbjct: 525 IEHYEGAFPAWLAPTQAVIMNITDKQADFALEVEKTLAESGFRAKSDLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
           ++ K+P +++ GD+E   +++ +R      T++ + L ++P+
Sbjct: 585 TLLKVPYLLVIGDREVEMQTVAVR------TREGADLGSMPV 620


>gi|296282100|ref|ZP_06860098.1| threonyl-tRNA synthetase [Citromicrobium bathyomarinum JL354]
          Length = 669

 Score =  652 bits (1682), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 316/667 (47%), Positives = 440/667 (65%), Gaps = 21/667 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           M   +K++ PDGS++  P  +T +DVA +I   LAK A+A  +NG++ D++ P   +  +
Sbjct: 1   MTELLKISLPDGSVREMPEGSTPADVAAAIGPGLAKAAIAARVNGELRDITRPFEGDAQL 60

Query: 60  EIITPED-PRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF---DKEQPFS 115
            ++T +D   +L + RH  AH++AEAVQ+++P  Q+  GP  +DGFYYDF   +    F+
Sbjct: 61  ALVTSKDVDEALELARHDYAHVLAEAVQNLFPGTQITFGPATDDGFYYDFAPAEGRGAFT 120

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            ++L +IE++M+ IIA D+P  ++  + ++  + F+   E++K E    +P  E +T+YR
Sbjct: 121 EEDLPKIEEEMRRIIAADTPLEREVWTRQQLIQWFKDHGESFKAEWAAELPEGEELTIYR 180

Query: 176 QGEWFDLCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
           QG+W D+CRGPH+ STG++  + FKL +V+GAYWRGD    MLSRIYGT W  +++L ++
Sbjct: 181 QGDWLDMCRGPHLASTGKLDPQAFKLTRVSGAYWRGDQKNAMLSRIYGTGWLNKKQLNEH 240

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEE 293
           L+ LEE+ KRDHRKL REMDLFH+ E+  G +FWH +G+KI++ L SYMRRK+    Y E
Sbjct: 241 LHRLEEAAKRDHRKLGREMDLFHLQEEAHGSVFWHPQGYKIWRQLESYMRRKMDGAGYRE 300

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAV-----KCADD---TIKDLRTFALKPMNCPGHV 345
           I TPQV+D   W+QSGHW  YR NMF +        D+     KD    ALKPMNCP HV
Sbjct: 301 IKTPQVMDARQWEQSGHWGKYRENMFVIPDEVPNTEDEGELVSKDADWMALKPMNCPAHV 360

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            VF  G+ SYRELP+RL E G  +RNEP G+LHGLMRVR FTQDDAH+FCT++Q+  E  
Sbjct: 361 LVFKQGITSYRELPIRLGEMGCCHRNEPHGALHGLMRVRQFTQDDAHIFCTEKQVVEEVR 420

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSS--QDRI 463
               L  ++Y+DFGF K  +KL+ RPE+R GSDA WD AE  ++   D +  +    D  
Sbjct: 421 AFIELADAVYRDFGF-KYAIKLALRPEQRFGSDADWDKAEQELR---DAVAEAGMMNDEY 476

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
               L GEGAFY PK E+ L DAIGR WQ GTIQ D  LP R +A Y+    EK  PVM+
Sbjct: 477 GWEELPGEGAFYAPKLEWHLTDAIGRTWQVGTIQGDRVLPERLDASYIGEDGEKHRPVML 536

Query: 524 HRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIE 583
           HRA+FGS ERFIGI+IE+F G LP+WL+P QA+V TI S A +YA E    L++  +  E
Sbjct: 537 HRAIFGSYERFIGILIEHFAGKLPVWLAPTQAVVATIVSDADDYASEALAKLRAAGIRAE 596

Query: 584 TDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +D RNE INYK+REHS+ K+P +++ G +EA E ++ +R  G    + +SL +AI +L  
Sbjct: 597 SDLRNEKINYKVREHSLAKVPHLLVVGKREAEEGTVAVRTLGEREQRVMSLDEAIAMLRD 656

Query: 644 ESLPPDC 650
            + PPD 
Sbjct: 657 GATPPDL 663


>gi|285017864|ref|YP_003375575.1| threonyl-tRNA synthetase (threonine--tRNA ligase) protein
           [Xanthomonas albilineans GPE PC73]
 gi|283473082|emb|CBA15587.1| probable threonyl-trna synthetase (threonine--trna ligase) protein
           [Xanthomonas albilineans]
          Length = 634

 Score =  652 bits (1681), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 301/637 (47%), Positives = 433/637 (67%), Gaps = 20/637 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I +T PDGS ++F    +  +VA+SI   LAK  +A  ++G++ D SD +  + ++ +IT
Sbjct: 2   ITITLPDGSRRDFEHPVSPMEVAQSIGPGLAKATIAGQVDGRLVDASDLIDHDANLRLIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   + +IRHSCAH++  AV+ ++PE ++ IGP+I +GFYYD    +PF+ +++A IE
Sbjct: 62  AKDEEGVDIIRHSCAHLVGHAVKQLYPEAKMVIGPVIAEGFYYDIYSARPFTPEDMAAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVT---LYRQGEWF 180
           ++MQE+IA+D   +K+     +  E+F+ + E YK+ ++  +P  E+VT   LY   E+ 
Sbjct: 122 RRMQELIAQDYDVIKKVTPRAEVIEVFQQRGEDYKLRLIADMP--EDVTAMGLYYHQEYV 179

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           D+CRGPHV +T +  K FKL +++GAYWRGD+    L RIYGTAW  +++L  Y+  +EE
Sbjct: 180 DMCRGPHVPNT-RFLKAFKLTRISGAYWRGDAKNEQLQRIYGTAWADKKQLDAYILRMEE 238

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQV 299
           ++KRDHRK+A+ +DLFH+ E+G G++FWH KGW I+Q +  YMR+  +D+ Y E+  PQ+
Sbjct: 239 ADKRDHRKIAKALDLFHLQEEGPGLVFWHPKGWSIWQVVEQYMRKVYRDNGYGEVRCPQI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           LD  LWQQSGHWD+Y+ NMF       T  + RT+A+KPMNCPGHV VFN GL SYR+LP
Sbjct: 299 LDVSLWQQSGHWDNYQDNMFF------TESEKRTYAVKPMNCPGHVQVFNQGLHSYRDLP 352

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R  EFG+ +RNEPSG+LHG++RVRGFTQDD H+FCT++Q+  E    H   + +Y DFG
Sbjct: 353 IRYGEFGACHRNEPSGALHGILRVRGFTQDDGHIFCTEQQIEAEVTAFHRQALKVYTDFG 412

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F+ I +K++ RPEKR+G DA WD AE  ++  L       Q+      L GEGAFYGPK 
Sbjct: 413 FDDIQIKIALRPEKRLGEDATWDKAEAALRAALGACGVEWQE------LPGEGAFYGPKI 466

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           EY LKDAIGR WQ GT+QVDF +P R  A YV+ HS+K HPVM+HRA+ GS+ERFIGI+I
Sbjct: 467 EYHLKDAIGRTWQLGTMQVDFMMPGRLGAEYVDEHSQKRHPVMLHRAIVGSMERFIGILI 526

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E+  G  P WL+P+QA+V  IT +  +Y   +  LL +    IE D RNE I YKIREH+
Sbjct: 527 EHHAGVFPAWLAPVQAMVMNITDAQADYVDSVRKLLANQGFRIEADLRNEKIGYKIREHT 586

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
           ++++P +++ GD+E    +I +R         +S+ D
Sbjct: 587 LQRVPYLLVVGDREKENGAIAVRTRSGEDLGTMSVAD 623


>gi|90417311|ref|ZP_01225237.1| threonyl-tRNA synthetase [marine gamma proteobacterium HTCC2207]
 gi|90330896|gb|EAS46159.1| threonyl-tRNA synthetase [marine gamma proteobacterium HTCC2207]
          Length = 642

 Score =  652 bits (1681), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 318/648 (49%), Positives = 435/648 (67%), Gaps = 24/648 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
           MP+   +T PDGS + F    + +DVA  I   LAK  +A  +NG+V D S  ++E S +
Sbjct: 1   MPA---ITLPDGSQRVFDNPVSVADVAADIGAGLAKATLAGVVNGQVVDASYIMQEDSTL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            I+T     +L +IRHS AH++A AV+ ++P  QV IGP+IEDGFYYDF  E+ F+ ++L
Sbjct: 58  AIVTDRSDEALDIIRHSSAHLLAMAVKQLFPAAQVTIGPVIEDGFYYDFAFERAFTPEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IE +M E++  D    ++    ++A E F+S  E YK EI+ SIPA E + LYRQG++
Sbjct: 118 EAIEARMTELVKADHGIAREEWDRDEAVEFFKSIGEEYKAEIIASIPAGEPIGLYRQGDF 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV ST ++  F KL KVAGAYWRGDSN  ML RIYGTAW  ++EL  Y+  L 
Sbjct: 178 IDLCRGPHVPSTAKLPAF-KLTKVAGAYWRGDSNNEMLQRIYGTAWTNKKELKAYINRLA 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQ 298
           E+EKRDHRK+ +++DL+H+ E+  G IFWH KGW ++  +  YMR K ++  Y+EI TPQ
Sbjct: 237 EAEKRDHRKINKKLDLYHMQEEAPGSIFWHPKGWSVYSAIEEYMRNKQREQGYQEIKTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D  LW++SGH D +  +MF+++  D      R +A+KPMNCP HV VFN GLKSYR+L
Sbjct: 297 IVDMSLWEKSGHADKFGDDMFSLQTDD------RNYAVKPMNCPCHVQVFNQGLKSYRDL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFGS +RNEPSGSLHG+MRVR FTQDDAH+FCT+EQ+  E  +  + +  +Y DF
Sbjct: 351 PLRLAEFGSCHRNEPSGSLHGIMRVRSFTQDDAHIFCTEEQIQPEVSQFIDFLHEVYADF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF++I+ +LSTRP +RVGSD  WD AE  +   LD      Q+      L GEGAFYGPK
Sbjct: 411 GFDEIIYRLSTRPPERVGSDEDWDRAEEALGQALDAKSLPWQE------LPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD IGR WQ GTIQVDF++P R +A YV     +  PVM+HRA+ GS ERFIGI+
Sbjct: 465 IEFSLKDCIGRVWQLGTIQVDFSMPGRLDAQYVAEDGARKVPVMLHRAILGSFERFIGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE ++G  P WL+P QA+V  IT +  EYAQE+A  L++    +  D RNE I +KIR H
Sbjct: 525 IEQYEGAFPFWLAPEQAVVANITDAQAEYAQEVAKSLQNKGFRVNCDLRNEKIGFKIRGH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           S++++P I++ GD E   R++ +R      T+    L ++P+   E++
Sbjct: 585 SMQRVPFILVVGDNEKESRTVAVR------TRDGKDLGSLPLEQVEAM 626


>gi|121610033|ref|YP_997840.1| threonyl-tRNA synthetase [Verminephrobacter eiseniae EF01-2]
 gi|166225514|sp|A1WMG5|SYT_VEREI RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|121554673|gb|ABM58822.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase
           [Verminephrobacter eiseniae EF01-2]
          Length = 639

 Score =  651 bits (1680), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 314/615 (51%), Positives = 419/615 (68%), Gaps = 19/615 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           I +T PDGS + FP   T ++VA SI   LAK A+A  I  ++ D S  +  +  + IIT
Sbjct: 2   IHITLPDGSQRAFPGPVTVAEVAASIGPGLAKAALAGKIGDQLLDTSHRITADCRLSIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   L +IRHS AH++A AV+ ++PE QV IGP+I++GFYYDF  ++PF+ D+L  +E
Sbjct: 62  DKDDAGLELIRHSTAHLLAYAVKELFPEAQVTIGPVIDNGFYYDFAYQRPFTPDDLVAME 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M E+ A+D P L++ L  + A   F+   E YK EI+  IP  E V+LYR+G + DLC
Sbjct: 122 KRMAELAAKDEPVLRRVLPRDAAIAYFKGLGEHYKAEIIAGIPGDEEVSLYREGSFEDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV STG++K FFKLMKVAGAYWRGD    ML R+YGTAW +++ L QYL  LEE+EK
Sbjct: 182 RGPHVPSTGKLK-FFKLMKVAGAYWRGDHRNQMLQRVYGTAWASKEALQQYLTMLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQ 302
           RDHRKL RE+DLFHI E   G +FWH KGW ++Q +  YMRR  +D+ Y+E+  PQ+LDQ
Sbjct: 241 RDHRKLGRELDLFHIDEHSPGTVFWHPKGWTLWQEVEQYMRRVYRDNGYQEVKGPQILDQ 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+++GHWD YR NMF       T  + R +ALKPMNCPGH+ +F  G+KSYR+LP+R 
Sbjct: 301 GLWEKTGHWDKYRENMFV------TESEKRDYALKPMNCPGHIIIFKQGIKSYRDLPLRF 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG  +RNEPSG LHG+MRVR FTQDD H+FCT +Q+ +E L    L+  +Y+DFGF  
Sbjct: 355 GEFGQCHRNEPSGGLHGIMRVRAFTQDDGHIFCTAQQIQSEILAFTALVQKVYRDFGFTD 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+ KL+TRPEK +G++  WD AE+ +   L       +       L GEGAFYGPK EY 
Sbjct: 415 IIYKLATRPEKHIGTEESWDQAEHALAQGLRASGCEFE------YLPGEGAFYGPKVEYT 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LKDA+GR WQCGTIQVD N+P R +A +V     +  P+M+HRA+ GS+ERFIGI++E  
Sbjct: 469 LKDALGRQWQCGTIQVDPNMPERLDAEFVGEDGARHRPIMLHRAIVGSLERFIGILLEQH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKS----HHLSIETDFRNETINYKIREH 598
            G LP WL+P+Q  +  IT +  +Y +EIA  ++       L +  D RNE I YKIREH
Sbjct: 529 AGALPAWLAPVQLALLNITEAQSDYCREIAAKMQKALSHLGLRLLLDLRNEKITYKIREH 588

Query: 599 SIKKIPIIIICGDKE 613
           S++K+P I++ GDKE
Sbjct: 589 SMQKLPYILVAGDKE 603


>gi|71908290|ref|YP_285877.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Dechloromonas
           aromatica RCB]
 gi|123733181|sp|Q47CM4|SYT_DECAR RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|71847911|gb|AAZ47407.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Dechloromonas
           aromatica RCB]
          Length = 638

 Score =  651 bits (1680), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 310/628 (49%), Positives = 433/628 (68%), Gaps = 18/628 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
           MP DIKL  PDGSI+++    T ++VA SI   LA+ A+A  I G++ D S  + + + +
Sbjct: 1   MP-DIKL--PDGSIRSYEQAVTVAEVAASIGAGLARAALAGKIGGQLVDTSYLIEQNADL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT  D   L +IRHS AH++A AV+ ++PE QV IGP+IE+GFYYDF  ++PF+ ++L
Sbjct: 58  AIITERDAEGLELIRHSTAHLLAYAVKELFPEAQVTIGPVIENGFYYDFAYKRPFTPEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEK+M E+  +D P  ++  + + A + F    E YK E++ +IPA + V+LYR+G++
Sbjct: 118 VAIEKRMAELAKKDIPVSREVWARDDAVKFFLDLGEKYKAELIGAIPADQQVSLYREGDF 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV +T ++K  FKLMKVAGAYWRGD     L RIYGTAW  +++L  YL+ LE
Sbjct: 178 IDLCRGPHVPTTAKLK-VFKLMKVAGAYWRGDHRNEQLQRIYGTAWAKKEDLDAYLHMLE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQ 298
           E+EKRDHR+L ++ DLFH+ ++  G++FWH KGW I+Q +  YMR   +++ Y+E+  PQ
Sbjct: 237 EAEKRDHRRLGKQYDLFHMQDEAPGLVFWHPKGWAIWQEIEGYMRAVYRNNGYQEVRCPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +LD+ LW++SGHW+ Y+ NMF       T  + R +A+KPMNCPGHV VFN GL+SYREL
Sbjct: 297 ILDKSLWEKSGHWEHYKDNMFT------TSSENRDYAVKPMNCPGHVQVFNAGLRSYREL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R  EFGS +RNEP+G+LHGLMRVRGF QDD H+FCT++Q+ +E    + L+  +Y DF
Sbjct: 351 PLRYGEFGSCHRNEPAGALHGLMRVRGFVQDDGHIFCTEDQIESEVTAFNALVKKVYADF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF  + VKL+ RP+ RVG+D +WD AE+ ++  L          +    L GEGAFYGPK
Sbjct: 411 GFNDVAVKLALRPDSRVGADDVWDRAEDALRQGL------RASGLEWTELPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ ++DAIGR WQCGT+QVDF++P R  A YV +   +  PVM+HRA+ GS+ERFIGI+
Sbjct: 465 IEFHIRDAIGRSWQCGTMQVDFSMPGRLGAEYVGADDTRKVPVMLHRAILGSLERFIGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IENF G LPLWL+P+Q +V  I+    +YA E+A  L S     E D RNE I YKIREH
Sbjct: 525 IENFAGALPLWLAPVQVVVLNISEKQADYAAEVAQKLHSAGFRAEADLRNEKITYKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGS 626
           S+ ++P  ++ GDKE ++  + +R  G 
Sbjct: 585 SLNRLPYQLVVGDKEKADGLVAVRTRGG 612


>gi|330973951|gb|EGH74017.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 640

 Score =  651 bits (1680), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 302/642 (47%), Positives = 441/642 (68%), Gaps = 24/642 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP+   +T PDGS ++F    + +DVA SI   LAK  VA  ++GK+ D  D +  + S+
Sbjct: 1   MPT---ITLPDGSQRSFDQAVSVADVALSIGAGLAKATVAGKVDGKLVDACDLIENDASL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           +IITP+D   L +IRHSCAH++  AV+ ++P  ++ IGP+I+DGFYYD   E+PF+ D++
Sbjct: 58  QIITPKDQEGLEIIRHSCAHLVGHAVKQLYPTAKMVIGPVIDDGFYYDIAYERPFTPDDM 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A IE++MQ++I +D   +K+     +  E+F ++ E YK+ ++E +P ++ + LY   E+
Sbjct: 118 AAIEQRMQQLIEKDYDVIKKVTPRAEVIEVFTARHEDYKLRLVEDMPNEQAMGLYYHEEY 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            D+CRGPHV +T +  K FKL K++GAYWRGD+    L R+YGTAW  +++L  Y+  +E
Sbjct: 178 VDMCRGPHVPNT-RFLKSFKLTKLSGAYWRGDAKNEQLQRVYGTAWADKKQLAAYIQRIE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQ 298
           E+EKRDHRK+ + + LFH  E+  G++FWH +GW ++Q L  YMR+  +++ Y EI TPQ
Sbjct: 237 EAEKRDHRKIGKRLGLFHTQEEAPGMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHW +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYREL
Sbjct: 297 VVDRSLWEKSGHWANYADNMFT------TESESRDYAIKPMNCPCHVQVFNQGLKSYREL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFG+ +RNEPSG+LHG+MRVRGFTQDDAH+FCT++QM  E      L + +Y DF
Sbjct: 351 PMRLAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEDQMQAESAAFIKLTLDVYADF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+ I +KLSTRPEKRVGSD LWD AE+ +   LD+        +   +  GEGAFYGPK
Sbjct: 411 GFKDIELKLSTRPEKRVGSDELWDRAESALASALDSAG------LPYDLQPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD +GR WQCGT+Q+DFNLP R +A YV+  + + +PVM+HRA+ GS ERFIGI+
Sbjct: 465 IEFSLKDCLGRVWQCGTLQLDFNLPIRLSAEYVSEDNSRKNPVMLHRAILGSFERFIGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+++G  P WL+P QA++  IT    ++A E+   L       ++D RNE I +KIREH
Sbjct: 525 IEHYEGAFPAWLAPTQAVIMNITDKQADFALEVEKTLAESGFRAKSDLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
           ++ K+P +++ GD+E   +++ +R      T++ + L ++P+
Sbjct: 585 TLLKVPYLLVIGDREVEMQTVAVR------TREGADLGSMPV 620


>gi|126667900|ref|ZP_01738865.1| threonyl-tRNA synthetase [Marinobacter sp. ELB17]
 gi|126627560|gb|EAZ98192.1| threonyl-tRNA synthetase [Marinobacter sp. ELB17]
          Length = 641

 Score =  651 bits (1679), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 309/618 (50%), Positives = 428/618 (69%), Gaps = 15/618 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS ++F    T  DVA  I   LAK A+A  ++G + D S  +  +  + IIT  
Sbjct: 4   VTLPDGSHRSFAEAVTVHDVAADIGAGLAKAALAGKVDGTLVDTSYLIENDAQLAIITER 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L VIRHS AH++A  V+ ++PE QV IGP+I+DGFYYDF  ++PF++++LA+IEK+
Sbjct: 64  DEDGLDVIRHSTAHLLAMTVKELFPEAQVTIGPVIDDGFYYDFKYDRPFTNEDLARIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M E+  +D P  +  +S  +A ELF S  E YKV I+E IP  E+++ YRQG++ DLCRG
Sbjct: 124 MAELAKQDLPVSRSVMSRSEAVELFSSMGEEYKVRIIEDIPGAEDLSFYRQGDFIDLCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV STG++K F KL KV+GA+WRGD+N   L R+YGTAW  +++L  Y++ +EE+EKRD
Sbjct: 184 PHVPSTGKMKAF-KLTKVSGAFWRGDTNNEQLQRVYGTAWANKKDLKAYVHRIEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHL 304
           HRK+ ++++LFH+ E+  G++FWH  GW I+Q +  YMR  + +  Y+EI TPQ++ + L
Sbjct: 243 HRKVGKKLNLFHMQEEAPGMVFWHPDGWTIYQKMEQYMRDILHRHGYQEIKTPQIVSRSL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHWD ++  MF       T  +   FA+KPMNCP H+ VFN GLKSY++LP+RLAE
Sbjct: 303 WEKSGHWDKFKEGMFT------TESEKHDFAIKPMNCPCHIQVFNQGLKSYKDLPLRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNE SG+LHGLMRVRGFTQDDAH+FC +  + NE  K  +L+  +YKDFGF +I+
Sbjct: 357 FGSCHRNEASGALHGLMRVRGFTQDDAHIFCEESDIQNEVSKFIDLLHEVYKDFGFTEIL 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
            KLSTRPEKRVGSD +WD +E  ++  L+      ++ +   +L GEGAFYGPK E+ LK
Sbjct: 417 YKLSTRPEKRVGSDEVWDKSEAALEQALN------REGVKWELLPGEGAFYGPKIEFSLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D IGR WQCGTIQVDF++P R  A YV  +SE+  PVM+HRAV GS ERFIGI+IE ++G
Sbjct: 471 DCIGRVWQCGTIQVDFSMPGRLGAQYVADNSERKTPVMLHRAVLGSFERFIGILIEEYEG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P WL+P Q  +  IT +  EY + +A    S    +  D RNE I +KIREH+I K+P
Sbjct: 531 AFPSWLAPTQVAILNITDNQREYCENLAKKWDSLGFRVNADLRNEKIGFKIREHTINKVP 590

Query: 605 IIIICGDKEASERSIGIR 622
            +++ GDKE    ++ +R
Sbjct: 591 FLVVVGDKEVENNTVAVR 608


>gi|289673298|ref|ZP_06494188.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. syringae FF5]
 gi|330898079|gb|EGH29498.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 640

 Score =  650 bits (1678), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 302/642 (47%), Positives = 441/642 (68%), Gaps = 24/642 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP+   +T PDGS ++F    + +DVA SI   LAK  VA  ++GK+ D  D +  + S+
Sbjct: 1   MPT---ITLPDGSQRSFDHAVSVADVALSIGAGLAKATVAGKVDGKLVDACDLIENDASL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           +IITP+D   L +IRHSCAH++  AV+ ++P  ++ IGP+I+DGFYYD   E+PF+ D++
Sbjct: 58  QIITPKDQEGLEIIRHSCAHLVGHAVKQLYPTAKMVIGPVIDDGFYYDIAYERPFTPDDM 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A IE++MQ++I +D   +K+     +  E+F ++ E YK+ ++E +P ++ + LY   E+
Sbjct: 118 AAIEQRMQQLIEKDYDVIKKVTPRAEVIEVFTARHEDYKLRLVEDMPNEQAMGLYYHEEY 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            D+CRGPHV +T +  K FKL K++GAYWRGD+    L R+YGTAW  +++L  Y+  +E
Sbjct: 178 VDMCRGPHVPNT-RFLKSFKLTKLSGAYWRGDAKNEQLQRVYGTAWADKKQLAAYILRIE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQ 298
           E+EKRDHRK+ + + LFH  E+  G++FWH +GW ++Q L  YMR+  +++ Y EI TPQ
Sbjct: 237 EAEKRDHRKIGKRLGLFHTQEEAPGMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHW +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYREL
Sbjct: 297 VVDRSLWEKSGHWANYADNMFT------TESESRDYAIKPMNCPCHVQVFNQGLKSYREL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFG+ +RNEPSG+LHG+MRVRGFTQDDAH+FCT++QM  E      L + +Y DF
Sbjct: 351 PMRLAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEDQMQAESAAFIKLTLDVYADF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+ I +KLSTRPEKRVGSD LWD AE+ +   LD+        +   +  GEGAFYGPK
Sbjct: 411 GFKDIELKLSTRPEKRVGSDELWDRAESALASALDSAG------LPYDLQPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD +GR WQCGT+Q+DFNLP R +A YV+  + + +PVM+HRA+ GS ERFIGI+
Sbjct: 465 IEFSLKDCLGRVWQCGTLQLDFNLPIRLSAEYVSEDNSRKNPVMLHRAILGSFERFIGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+++G  P WL+P QA++  IT    ++A E+   L       ++D RNE I +KIREH
Sbjct: 525 IEHYEGAFPAWLAPTQAVIMNITDKQADFALEVEKTLAESGFRAKSDLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
           ++ K+P +++ GD+E   +++ +R      T++ + L ++P+
Sbjct: 585 TLLKVPYLLVIGDREVEMQTVAVR------TREGADLGSMPV 620


>gi|302187613|ref|ZP_07264286.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. syringae 642]
          Length = 640

 Score =  650 bits (1678), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 302/642 (47%), Positives = 441/642 (68%), Gaps = 24/642 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP+   +T PDGS ++F    + +DVA SI   LAK  VA  ++GK+ D  D +  + S+
Sbjct: 1   MPT---ITLPDGSQRSFDHAVSVADVALSIGAGLAKATVAGKVDGKLVDACDLIENDASL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           +IITP+D   L +IRHSCAH++  AV+ ++P  ++ IGP+I+DGFYYD   E+PF+ D++
Sbjct: 58  QIITPKDQEGLEIIRHSCAHLVGHAVKQLYPTAKMVIGPVIDDGFYYDIAYERPFTPDDM 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A IE++MQ++I +D   +K+     +  E+F ++ E YK+ ++E +P ++ + LY   E+
Sbjct: 118 AAIEQRMQQLIEKDYDVIKKVTPRAEVIEVFTARHEDYKLRLVEDMPNEQAMGLYYHEEY 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            D+CRGPHV +T +  K FKL K++GAYWRGD+    L R+YGTAW  +++L  Y+  +E
Sbjct: 178 VDMCRGPHVPNT-RFLKSFKLTKLSGAYWRGDAKNEQLQRVYGTAWADKKQLAAYIQRIE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQ 298
           E+EKRDHRK+ + + LFH  E+  G++FWH +GW ++Q L  YMR+  +++ Y EI TPQ
Sbjct: 237 EAEKRDHRKIGKRLGLFHTQEEAPGMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHW +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYREL
Sbjct: 297 VVDRSLWEKSGHWANYADNMFT------TESESRDYAIKPMNCPCHVQVFNQGLKSYREL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFG+ +RNEPSG+LHG+MRVRGFTQDDAH+FCT++QM  E      L + +Y DF
Sbjct: 351 PMRLAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEDQMQAESAAFIKLTLDVYADF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+ I +KLSTRPEKRVGSD LWD AE+ +   LD+        +   +  GEGAFYGPK
Sbjct: 411 GFKDIELKLSTRPEKRVGSDELWDRAESALASALDSAG------LPYDLQPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD +GR WQCGT+Q+DFNLP R +A YV+  + + +PVM+HRA+ GS ERFIGI+
Sbjct: 465 IEFSLKDCLGRVWQCGTLQLDFNLPIRLSAEYVSEDNSRKNPVMLHRAILGSFERFIGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+++G  P WL+P QA++  IT    ++A E+   L       ++D RNE I +KIREH
Sbjct: 525 IEHYEGAFPAWLAPTQAVIMNITDKQADFALEVEKTLAESGFRAKSDLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
           ++ K+P +++ GD+E   +++ +R      T++ + L ++P+
Sbjct: 585 TLLKVPYLLVIGDREVEMQTVAVR------TREGADLGSMPV 620


>gi|330951866|gb|EGH52126.1| threonyl-tRNA synthetase [Pseudomonas syringae Cit 7]
          Length = 640

 Score =  650 bits (1678), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 302/642 (47%), Positives = 441/642 (68%), Gaps = 24/642 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP+   +T PDGS ++F    + +DVA SI   LAK  VA  ++GK+ D  D +  + S+
Sbjct: 1   MPT---ITLPDGSQRSFDHAVSVADVALSIGAGLAKATVAGKVDGKLVDACDLIENDASL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           +IITP+D   L +IRHSCAH++  AV+ ++P  ++ IGP+I+DGFYYD   E+PF+ D++
Sbjct: 58  QIITPKDQEGLEIIRHSCAHLVGHAVKQLYPTAKMVIGPVIDDGFYYDIAYERPFTPDDM 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A IE++MQ++I +D   +K+     +  E+F ++ E YK+ ++E +P ++ + LY   E+
Sbjct: 118 AGIEQRMQQLIEKDYDVIKKVTPRAEVIEVFTARHEDYKLRLVEDMPNEQAMGLYYHEEY 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            D+CRGPHV +T +  K FKL K++GAYWRGD+    L R+YGTAW  +++L  Y+  +E
Sbjct: 178 VDMCRGPHVPNT-RFLKSFKLTKLSGAYWRGDAKNEQLQRVYGTAWADKKQLAAYILRIE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQ 298
           E+EKRDHRK+ + + LFH  E+  G++FWH +GW ++Q L  YMR+  +++ Y EI TPQ
Sbjct: 237 EAEKRDHRKIGKRLGLFHTQEEAPGMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHW +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYREL
Sbjct: 297 VVDRSLWEKSGHWANYADNMFT------TESESRDYAIKPMNCPCHVQVFNQGLKSYREL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFG+ +RNEPSG+LHG+MRVRGFTQDDAH+FCT++QM  E      L + +Y DF
Sbjct: 351 PMRLAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEDQMQAESAAFIKLTLDVYADF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+ I +KLSTRPEKRVGSD LWD AE+ +   LD+        +   +  GEGAFYGPK
Sbjct: 411 GFKDIELKLSTRPEKRVGSDELWDRAESALASALDSAG------LPYDLQPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD +GR WQCGT+Q+DFNLP R +A YV+  + + +PVM+HRA+ GS ERFIGI+
Sbjct: 465 IEFSLKDCLGRVWQCGTLQLDFNLPIRLSAEYVSEDNSRKNPVMLHRAILGSFERFIGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+++G  P WL+P QA++  IT    ++A E+   L       ++D RNE I +KIREH
Sbjct: 525 IEHYEGAFPAWLAPTQAVIMNITDKQADFALEVEKTLAESGFRAKSDLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
           ++ K+P +++ GD+E   +++ +R      T++ + L ++P+
Sbjct: 585 TLLKVPYLLVIGDREVEMQTVAVR------TREGADLGSMPV 620


>gi|119505276|ref|ZP_01627351.1| threonyl-tRNA synthetase [marine gamma proteobacterium HTCC2080]
 gi|119458967|gb|EAW40067.1| threonyl-tRNA synthetase [marine gamma proteobacterium HTCC2080]
          Length = 639

 Score =  650 bits (1678), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 310/618 (50%), Positives = 426/618 (68%), Gaps = 15/618 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +  PDGS + F    + +DVA  I   LAK A+A  ++G+  D S  +  + ++ IIT  
Sbjct: 4   INLPDGSQRTFEQPVSVADVAFDIGPGLAKAALAGVVDGREVDTSFVIDSDSALSIITER 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   + +IRHS AH++A+AVQ ++P  QV IGP +E+GFYYDF     F+ ++L +IEK+
Sbjct: 64  DEAGVEIIRHSTAHLLAQAVQQLFPGTQVTIGPTVENGFYYDFATGHNFTPEDLERIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+E+ + D P  +   S E+A +LF +  E +KV+I+E +P  E +++Y+QGEW DLCRG
Sbjct: 124 MEELASADLPVERVVYSREQAIDLFRNMGEHFKVQIIEDLPEGEEISIYKQGEWMDLCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +T ++K F KL KVAGAYWRGD+N  ML RIYGTAW  +++L  YL  + E+EKRD
Sbjct: 184 PHVPTTSKIKAF-KLTKVAGAYWRGDANNQMLQRIYGTAWGNKKQLKAYLNRIAEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHL 304
           HRK+A+++DLFH  E+  G++FWH  GW I+Q + SYMR++ ++ DYEEI TPQV+D  L
Sbjct: 243 HRKIAKKLDLFHTQEEAPGMVFWHPAGWTIYQVIESYMRKQQLRFDYEEIKTPQVVDISL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           WQ+SGH D + + MF +  ADD     R FA+KPMNCP HV VFN GLKSYR+LP+RLAE
Sbjct: 303 WQRSGHADKFASGMFTLD-ADD-----RQFAVKPMNCPCHVQVFNQGLKSYRDLPLRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNEPSGSLHG+MRVRGFTQDDAH+FCT+ Q+ +E     +++  +Y DFGF +++
Sbjct: 357 FGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTEAQIQSEVATFIDMLHEVYADFGFTEVI 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
            +LSTRP +RVGS+  WD      +      +      +N  +L GEGAFYGPK E+ LK
Sbjct: 417 YRLSTRPAERVGSETDWD------RAEAALAEALDAKDLNWEMLPGEGAFYGPKIEFSLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D IGR WQ GTIQVDF++P R +A YV     +  PVM+HRAV GS ERFIGI+IE+++G
Sbjct: 471 DCIGRVWQLGTIQVDFSMPGRLDAQYVAEDGSRQVPVMLHRAVLGSFERFIGILIEHYEG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             PLWL+  QAIV  IT     YAQ++A  LK     + TD RNE I +KIREH + K+P
Sbjct: 531 EFPLWLASQQAIVAPITDKQGAYAQQVAADLKEAGFRVGTDLRNEKIGFKIREHELAKVP 590

Query: 605 IIIICGDKEASERSIGIR 622
           ++++ GDKE +  ++ +R
Sbjct: 591 LVLVVGDKEMAAGTVAVR 608


>gi|257092825|ref|YP_003166466.1| threonyl-tRNA synthetase [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
 gi|257045349|gb|ACV34537.1| threonyl-tRNA synthetase [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
          Length = 638

 Score =  650 bits (1677), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 313/640 (48%), Positives = 439/640 (68%), Gaps = 15/640 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS + F    T ++VA+SI   LA+ A+A  I+G++ D S  +  +  + IIT +
Sbjct: 4   VTLPDGSQREFAQPVTVAEVAQSIGAGLARAALAGKIDGRLVDTSFRIDTDVHLGIITEK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           DP  L VIRHS AH+MA AV+ ++P  QV IGP+IE+GFYYDF  E+PF+ ++LA IEK+
Sbjct: 64  DPEGLEVIRHSTAHLMAYAVKELFPAAQVTIGPVIENGFYYDFACERPFTLEDLAAIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M E+  RD    ++    ++A   F+S  E YK E++++IP  + V+LYR+G++ DLCRG
Sbjct: 124 MTELARRDLLVQREVWQRDEAIAFFKSIGEHYKAELIDAIPPGQEVSLYREGDFVDLCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV STG++K  FKLMK+AGAYWRGD     L RIYGTAW  +++   YL+ LEE+EKRD
Sbjct: 184 PHVPSTGKLK-VFKLMKLAGAYWRGDHRNEQLQRIYGTAWTRKEDQDAYLHLLEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHL 304
           HRKL R++DLFH+ ++  G++FWH KGW I+Q +  YMRR + ++ Y E+ TP ++D+ L
Sbjct: 243 HRKLGRQLDLFHLQDEAPGMVFWHAKGWTIWQEVEQYMRRLLGENGYCEVKTPMIMDRTL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHW +Y  +MF       T  + R +A+KPMNCPGH+ +FN GL+SYR+LP+RLAE
Sbjct: 303 WERSGHWQNYAEHMFT------TASENRDYAIKPMNCPGHIQIFNQGLRSYRDLPLRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNEPSG+LHG+MRVR F QDDAH+FCT+ Q+  E     +L+  IY DFGF  I+
Sbjct: 357 FGSCHRNEPSGALHGIMRVRAFVQDDAHIFCTEAQVLPETAAFIDLLEKIYADFGFTDIL 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           VKLSTRP+KR+GSDA+WD      +      +  +   +   +  GEGAFYGPK E+ LK
Sbjct: 417 VKLSTRPDKRIGSDAVWD------RAEAALAEALAAKGLAYDLQPGEGAFYGPKIEFSLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D +GR WQCGT+Q+DF LP R +A YV   +++  PVM+HRA+ GS+ERFIGI+IE++ G
Sbjct: 471 DCLGRVWQCGTLQLDFALPERLDAHYVGEDNDRHVPVMLHRAILGSLERFIGILIEHYAG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
            +PLWLSP+Q +V  I+    +YA+++A  L+   L  E D RNE I  KIREHS+ K+P
Sbjct: 531 AMPLWLSPMQVVVLNISEKQGDYAEQVAATLRRAGLRAEADLRNEKITRKIREHSLNKLP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
             ++ GDKE +   + +R  G     ++SL   I  L +E
Sbjct: 591 YQVVVGDKEVAANLVAVRTRGGQDLGQMSLESLIRQLLEE 630


>gi|120554978|ref|YP_959329.1| threonyl-tRNA synthetase [Marinobacter aquaeolei VT8]
 gi|166223352|sp|A1U2C3|SYT_MARAV RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|120324827|gb|ABM19142.1| Ser-tRNA(Thr) hydrolase [Marinobacter aquaeolei VT8]
          Length = 641

 Score =  650 bits (1677), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 310/618 (50%), Positives = 430/618 (69%), Gaps = 15/618 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPE 65
           +T PDGS ++F    T  DVA  I   LAK A+A  +NGK+ D S  +   + + I+T  
Sbjct: 4   ITLPDGSHRSFAEPVTVHDVAADIGAGLAKAALAGKVNGKLVDTSHLIENDTELAIVTER 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   + +IRHS AH+MA AVQ ++P  QV IGP+IE+GFYYDF  E+PF+++++A+IEK+
Sbjct: 64  DEDGVDIIRHSTAHLMAMAVQELFPGAQVTIGPVIENGFYYDFKYERPFTNEDMARIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+E+  +D P  +  +S ++A +LF    E YKV I+E IP +E+++ YRQG++ DLCRG
Sbjct: 124 MEELAKQDLPVSRSIMSRDEAIKLFNEMGEEYKVRIIEDIPGEEDLSFYRQGDFIDLCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV STG++K F KL KVAGAYWRGD++   L RIYGTAW  +++L  YL+ LEE+EKRD
Sbjct: 184 PHVPSTGKLKAF-KLTKVAGAYWRGDTSNEQLQRIYGTAWGNKKDLKAYLHRLEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHL 304
           HRK+ +++ LFH+ E+  G++FWH  GW ++Q +  YMR ++ K  Y+EI TPQV+ + L
Sbjct: 243 HRKIGKKLGLFHMQEEAPGMVFWHPDGWSLYQEVEQYMRAQQHKHGYKEIKTPQVVSRTL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHWD ++ +MF       T  +   +A+KPMNCP HV VFN GLKSY++LP+RLAE
Sbjct: 303 WEKSGHWDKFKDDMFT------TESEKHDYAIKPMNCPCHVQVFNQGLKSYKDLPLRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNE SG+LHGLMRVRGFTQDDAH+FC ++ +  E      ++  IY DFGF +I+
Sbjct: 357 FGSCHRNEASGALHGLMRVRGFTQDDAHIFCEEDAIQEEVSAFIAMLHEIYADFGFSEIL 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
            KLSTRPEKRVGSD +WD +E  ++  L+      ++ ++  +L GEGAFYGPK E+ LK
Sbjct: 417 YKLSTRPEKRVGSDEVWDKSEAALEQALN------REGVDWELLPGEGAFYGPKIEFSLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D +GR WQCGTIQVDF++P R  A YV  +SE+  PVM+HRAV GS ERFIGI+IE ++G
Sbjct: 471 DCLGRVWQCGTIQVDFSMPGRLGAQYVADNSERKTPVMLHRAVLGSFERFIGILIEEYEG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P WL+P Q  V  IT    +Y Q +A  L S    +  D RNE I +KIREH++ K+P
Sbjct: 531 AFPTWLAPTQVAVLNITDKQRDYCQNLAKKLDSSGYRVNADLRNEKIGFKIREHTLNKVP 590

Query: 605 IIIICGDKEASERSIGIR 622
            +++ GDKE    ++ +R
Sbjct: 591 YLVVVGDKEIENNAVAVR 608


>gi|289623636|ref|ZP_06456590.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|289647146|ref|ZP_06478489.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           2250]
 gi|298486701|ref|ZP_07004758.1| Threonyl-tRNA synthetase [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
 gi|298158784|gb|EFH99847.1| Threonyl-tRNA synthetase [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
 gi|330867695|gb|EGH02404.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           0893_23]
          Length = 640

 Score =  650 bits (1677), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 302/642 (47%), Positives = 440/642 (68%), Gaps = 24/642 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP+   +T PDGS ++F    + +DVA SI   LAK  VA  ++GK+ D  D +  + S+
Sbjct: 1   MPT---ITLPDGSQRSFDHAVSVADVALSIGAGLAKATVAGKVDGKLVDACDLIENDASL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           +IITP+D   L +IRHSCAH++  AV+ ++P  ++ IGP+I+DGFYYD   E+PF+ D++
Sbjct: 58  QIITPKDQEGLEIIRHSCAHLVGHAVKQLYPTAKMVIGPVIDDGFYYDIAYERPFTPDDM 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A IE++MQ++I +D   +K+     +  E+F ++ E YK+ ++E +P ++ + LY   E+
Sbjct: 118 AAIEQRMQQLIEKDYDVIKKVTPRAEVIEVFTARHEDYKLRLVEDMPNEQAMGLYYHEEY 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            D+CRGPHV +T +  K FKL K++GAYWRGD+    L R+YGTAW  +++L  Y+  +E
Sbjct: 178 VDMCRGPHVPNT-RFLKSFKLTKLSGAYWRGDAKNEQLQRVYGTAWADKKQLAAYIQRIE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQ 298
           E+EKRDHRK+ + + LFH  E+  G++FWH +GW ++Q L  YMR+  +++ Y EI TPQ
Sbjct: 237 EAEKRDHRKIGKRLGLFHTQEEAPGMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHW +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYREL
Sbjct: 297 VVDRSLWEKSGHWANYADNMFT------TESESRDYAIKPMNCPCHVQVFNQGLKSYREL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFG+ +RNEPSG+LHG+MRVRGFTQDDAH+FCT++QM  E      L + +Y DF
Sbjct: 351 PMRLAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEDQMQAESAAFIKLTLDVYADF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+ I +KLSTRPEKRVGSD LWD AE  +   LD+        +   +  GEGAFYGPK
Sbjct: 411 GFKDIELKLSTRPEKRVGSDELWDRAETALASALDSAG------LPYDLQPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD +GR WQCGT+Q+DFNLP R +A YV+  + + +PVM+HRA+ GS ERFIGI+
Sbjct: 465 IEFSLKDCLGRVWQCGTLQLDFNLPIRLSAEYVSEDNSRKNPVMLHRAILGSFERFIGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+++G  P WL+P QA++  IT    ++A E+   L       ++D RNE I +KIREH
Sbjct: 525 IEHYEGAFPAWLAPTQAVIMNITDKQADFALEVEKTLAESGFRAKSDLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
           ++ K+P +++ GD+E   +++ +R      T++ + L ++P+
Sbjct: 585 TLLKVPYLLVIGDREVEMQTVAVR------TREGADLGSMPV 620


>gi|119945879|ref|YP_943559.1| threonyl-tRNA synthetase [Psychromonas ingrahamii 37]
 gi|166225485|sp|A1SWU5|SYT_PSYIN RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|119864483|gb|ABM03960.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Psychromonas
           ingrahamii 37]
          Length = 635

 Score =  650 bits (1676), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 296/618 (47%), Positives = 423/618 (68%), Gaps = 15/618 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDG+ + F    +  ++A  I   LAK  +A  ++G++ D  DP+ ++ +I IIT +
Sbjct: 4   ITLPDGNQRQFDNTTSIMEIAADIGPGLAKACIAGRVDGQLVDACDPIEKDANIAIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D + L ++RHSCAH++  A++ ++P  ++AIGP IE+GFYYD D +   + DELA+I K+
Sbjct: 64  DDQGLEILRHSCAHLLGHAIKQLYPNAKMAIGPTIENGFYYDIDLDVTINDDELAKIAKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M E++  +   +K+ +S E+A+ LF+ + E+YK+EILE I   +   LY   E+ D+CRG
Sbjct: 124 MNELVKTNYTVVKEKVSVEEAKALFKERGESYKLEILEGIHPDDRPGLYHHEEYIDMCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV    +  ++FKLMKV+GAYWRG+S+  ML RIYGTAW  +++L  YL  LEE+ KRD
Sbjct: 184 PHV-PVMKFCQYFKLMKVSGAYWRGNSDNKMLQRIYGTAWADKKQLNAYLKRLEEAAKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHL 304
           HRK+ +++DL+H+ E+  G++FWH  GW I++ L  Y+R + +  DY+E+  PQ+LD+ L
Sbjct: 243 HRKIGKQLDLYHMQEEAPGMVFWHSNGWTIYRELEKYVREQTEAYDYQEVKAPQILDRAL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHW  Y+ NMF       T  + R +A+KPMNCPGH+ +FN GLKSYR+LP+R+AE
Sbjct: 303 WEKSGHWGKYKDNMFC------TSSENRDYAIKPMNCPGHLQIFNQGLKSYRDLPLRMAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNEPSGSLHGLMRVR FTQDDAH+FCT+EQ+ +E      ++   YK FGF+ I 
Sbjct: 357 FGSCHRNEPSGSLHGLMRVRAFTQDDAHIFCTEEQILDEVSACIQMVFECYKTFGFDDIA 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           VKLSTRP++RVG DA WD AE  +   L T      + IN GVL GEGAFYGPK E+ L 
Sbjct: 417 VKLSTRPDQRVGDDATWDKAEAALANALTT------NNINYGVLPGEGAFYGPKIEFTLY 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D +GR WQCGTIQ+DF++P R +A +V   +E+  PVMIHRA+ GS+ERFIGI+ E + G
Sbjct: 471 DCLGRGWQCGTIQLDFSMPGRLDASFVGEDNERHTPVMIHRAILGSLERFIGILTEEYAG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P WLSP Q +V  IT     +  E+ N LK   +   +D RNE I +KIREH++K++P
Sbjct: 531 VYPTWLSPKQVVVMNITDKQSAFVDEVVNKLKKSGIRAISDLRNEKIGFKIREHTLKRVP 590

Query: 605 IIIICGDKEASERSIGIR 622
            +++ GD+E     + +R
Sbjct: 591 YLLVIGDQEVEAGEVAVR 608


>gi|320324302|gb|EFW80381.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
           B076]
 gi|320328576|gb|EFW84578.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
           race 4]
 gi|330885566|gb|EGH19715.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
           race 4]
          Length = 640

 Score =  650 bits (1676), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 302/642 (47%), Positives = 440/642 (68%), Gaps = 24/642 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP+   +T PDGS ++F    + +DVA SI   LAK  VA  ++GK+ D  D +  + S+
Sbjct: 1   MPT---ITLPDGSQRSFDHVVSVADVALSIGAGLAKATVAGKVDGKLVDACDLIENDASL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           +IITP+D   L +IRHSCAH++  AV+ ++P  ++ IGP+I+DGFYYD   E+PF+ D++
Sbjct: 58  QIITPKDQEGLEIIRHSCAHLVGHAVKQLYPTAKMVIGPVIDDGFYYDIAYERPFTPDDM 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A IE++MQ++I +D   +K+     +  E+F ++ E YK+ ++E +P ++ + LY   E+
Sbjct: 118 AAIEQRMQQLIEKDYDVIKKVTPRAEVIEVFTARHEDYKLRLVEDMPNEQAMGLYYHEEY 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            D+CRGPHV +T +  K FKL K++GAYWRGD+    L R+YGTAW  +++L  Y+  +E
Sbjct: 178 VDMCRGPHVPNT-RFLKSFKLTKLSGAYWRGDAKNEQLQRVYGTAWADKKQLAAYIQRIE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQ 298
           E+EKRDHRK+ + + LFH  E+  G++FWH +GW ++Q L  YMR+  +++ Y EI TPQ
Sbjct: 237 EAEKRDHRKIGKRLGLFHTQEEAPGMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHW +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYREL
Sbjct: 297 VVDRSLWEKSGHWANYADNMFT------TESESRDYAIKPMNCPCHVQVFNQGLKSYREL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFG+ +RNEPSG+LHG+MRVRGFTQDDAH+FCT++QM  E      L + +Y DF
Sbjct: 351 PMRLAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEDQMQAESAAFIKLTLDVYADF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+ I +KLSTRPEKRVGSD LWD AE  +   LD+        +   +  GEGAFYGPK
Sbjct: 411 GFKDIELKLSTRPEKRVGSDELWDRAETALASALDSAG------LPYDLQPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD +GR WQCGT+Q+DFNLP R +A YV+  + + +PVM+HRA+ GS ERFIGI+
Sbjct: 465 IEFSLKDCLGRVWQCGTLQLDFNLPIRLSAEYVSEDNSRKNPVMLHRAILGSFERFIGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+++G  P WL+P QA++  IT    ++A E+   L       ++D RNE I +KIREH
Sbjct: 525 IEHYEGAFPAWLAPTQAVIMNITDKQADFALEVEKTLAESGFRAKSDLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
           ++ K+P +++ GD+E   +++ +R      T++ + L ++P+
Sbjct: 585 TLLKVPYLLVIGDREVEMQTVAVR------TREGADLGSMPV 620


>gi|332529095|ref|ZP_08405059.1| threonyl-tRNA synthetase [Hylemonella gracilis ATCC 19624]
 gi|332041318|gb|EGI77680.1| threonyl-tRNA synthetase [Hylemonella gracilis ATCC 19624]
          Length = 644

 Score =  650 bits (1676), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 303/615 (49%), Positives = 421/615 (68%), Gaps = 19/615 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +++T PD S + FP   T ++VA SI   L K  VA  ++G++ D SD +  +  ++IIT
Sbjct: 2   VQITLPDASQRQFPGPVTVAEVAASIGPGLLKNTVAGKVDGRLVDASDLIDHDAKLQIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+DP  + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ D++A IE
Sbjct: 62  PKDPEGVEIIRHSCAHLVGHAVKQLYPTARMVIGPVIEEGFYYDISYERPFTPDDVAAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M+ +IA+D   +K+     +  E+F+ + E YK+ ++E +P +  + LY   E+ D+C
Sbjct: 122 ARMKALIAQDYDVVKKMTPRAEVIEVFKQRGEDYKLRLIEDMPNETAMGLYYHQEYVDMC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +T +  K FKL K+AGAYWRGDS    L RIYGTAW  +++L  Y+  +EE+EK
Sbjct: 182 RGPHVPNT-RFLKAFKLTKLAGAYWRGDSKNEQLQRIYGTAWADKKDLDAYILRMEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQ 302
           RDHRKL RE+DLFH+ E   G +FWH KGW ++Q +  YMRR  +++ Y E+  PQ+LD+
Sbjct: 241 RDHRKLGRELDLFHLDEHSPGTVFWHPKGWTVWQEVEQYMRRVYRENGYREVKGPQILDK 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+++GHWD YR NMF       T  + R +ALKPMNCPGH+ ++  G+KSYR+LP+R 
Sbjct: 301 SLWEKTGHWDKYRENMFT------TESEKRDYALKPMNCPGHILIYKQGVKSYRDLPLRY 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG+ +RNEP+G LHG+MRVR FTQDD H+FCT++Q+  E     +L+  +YKDFGF +
Sbjct: 355 GEFGACHRNEPTGGLHGIMRVRAFTQDDGHIFCTEDQIQAEVKAFTSLLQKVYKDFGFTE 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+ KLSTRPEKR+GS+  WD AEN +    + ++ S         L GEGAFYGPK EY 
Sbjct: 415 IIYKLSTRPEKRIGSEESWDRAENALA---EGLRASG---CEFDYLPGEGAFYGPKIEYT 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LKDA+GR WQCGTIQVD NLP R +A +V     +  PVM+HRA+ GS+ERFIGI+IE  
Sbjct: 469 LKDALGRQWQCGTIQVDPNLPERLDAEFVGEDGGRHRPVMLHRAIVGSLERFIGILIEQH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLK----SHHLSIETDFRNETINYKIREH 598
            G LP WL+P Q  V  IT +  +Y QEIA  L+    +  L +ETD RNE I YKIREH
Sbjct: 529 GGALPAWLAPTQVAVLNITDAQADYCQEIAQKLRKALPNQELRVETDLRNEKITYKIREH 588

Query: 599 SIKKIPIIIICGDKE 613
           S++K+P I++ GDKE
Sbjct: 589 SMQKLPFILVAGDKE 603


>gi|330967298|gb|EGH67558.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. actinidiae str.
           M302091]
          Length = 640

 Score =  649 bits (1675), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 302/642 (47%), Positives = 440/642 (68%), Gaps = 24/642 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP+   +T P+GS ++F    + +DVA SI   LAK  VA  ++GK+ D  D +  + S+
Sbjct: 1   MPT---ITLPEGSQRSFDHAVSVADVALSIGAGLAKATVAGKVDGKLVDACDLIENDASL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           +IITP+D   L +IRHSCAH++  AV+ ++P  ++ IGP+I+DGFYYD   E+PF+ D+L
Sbjct: 58  QIITPKDAEGLEIIRHSCAHLVGHAVKQLYPTAKMVIGPVIDDGFYYDIAYERPFTPDDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A IE++MQ++I +D   +K      +  E+F ++ E YK+ ++E +P ++ + LY   E+
Sbjct: 118 AAIEQRMQQLIEKDYDVIKIVTPRAEVIEVFTARHEDYKLRLVEGMPDEQAMGLYYHEEY 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            D+CRGPHV +T +  K FKL K++GAYWRGD+    L R+YGTAW  +++L  Y+  +E
Sbjct: 178 VDMCRGPHVPNT-RFLKSFKLTKLSGAYWRGDAKNEQLQRVYGTAWADKKQLAAYIQRIE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQ 298
           E+EKRDHRK+ + + LFH  E+  G++FWH +GW ++Q L  YMR+  +++ Y EI TPQ
Sbjct: 237 EAEKRDHRKIGKRLGLFHTQEEAPGMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHW +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYREL
Sbjct: 297 VVDRSLWEKSGHWANYADNMFT------TQSESRDYAIKPMNCPCHVQVFNQGLKSYREL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFG+ +RNEPSG+LHG+MRVRGFTQDDAH+FCT++QM  E      L + +Y DF
Sbjct: 351 PLRLAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEDQMQAESAAFIKLTLDVYADF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+ I +KLSTRPEKRVGSD LWD AE+ +   LD+        +   +  GEGAFYGPK
Sbjct: 411 GFKDIELKLSTRPEKRVGSDELWDRAESALASALDSAG------LPYDLQPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD +GR WQCGT+Q+DFNLP R +A YV+  + + +PVM+HRA+ GS ERFIGI+
Sbjct: 465 IEFSLKDCLGRVWQCGTLQLDFNLPIRLSAEYVSEDNSRKNPVMLHRAILGSFERFIGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+++G  P WL+P QA++  IT    ++A E+   L       ++D RNE I +KIREH
Sbjct: 525 IEHYEGAFPAWLAPTQAVIMNITDKQADFALEVEKTLAESGFRAKSDLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
           ++ K+P +++ GD+E   +++ +R      T++ + L ++P+
Sbjct: 585 TLLKVPYLLVIGDREVEMQTVAVR------TREGADLGSMPV 620


>gi|330989241|gb|EGH87344.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str.
           M301315]
          Length = 640

 Score =  649 bits (1674), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 302/642 (47%), Positives = 439/642 (68%), Gaps = 24/642 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SI 59
           MP+   +T PDGS ++F    + +DVA SI   LAK  VA  ++GK+ D  D +    S+
Sbjct: 1   MPT---ITLPDGSQRSFDHAVSVADVALSIGAGLAKATVAGKVDGKLVDACDLIENDVSL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           +IITP+D   L +IRHSCAH++  AV+ ++P  ++ IGP+I+DGFYYD   E+PF+ D++
Sbjct: 58  QIITPKDQEGLEIIRHSCAHLVGHAVKQLYPTAKMVIGPVIDDGFYYDIAYERPFTPDDM 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A IE++MQ++I +D   +K+     +  E+F ++ E YK+ ++E +P ++ + LY   E+
Sbjct: 118 AAIEQRMQQLIEKDYDVIKKVTPRAEVIEVFTARHEDYKLRLVEDMPNEQAMGLYYHEEY 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            D+CRGPHV +T +  K FKL K++GAYWRGD+    L R+YGTAW  +++L  Y+  +E
Sbjct: 178 VDMCRGPHVPNT-RFLKSFKLTKLSGAYWRGDAKNEQLQRVYGTAWADKKQLAAYIQRIE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQ 298
           E+EKRDHRK+ + + LFH  E+  G++FWH +GW ++Q L  YMR+  +++ Y EI TPQ
Sbjct: 237 EAEKRDHRKIGKRLGLFHTQEEAPGMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHW +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYREL
Sbjct: 297 VVDRSLWEKSGHWANYADNMFT------TESESRDYAIKPMNCPCHVQVFNQGLKSYREL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFG+ +RNEPSG+LHG+MRVRGFTQDDAH+FCT++QM  E      L + +Y DF
Sbjct: 351 PMRLAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEDQMQAESAAFIKLTLDVYADF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+ I +KLSTRPEKRVGSD LWD AE  +   LD+        +   +  GEGAFYGPK
Sbjct: 411 GFKDIELKLSTRPEKRVGSDELWDRAETALASALDSAG------LPYDLQPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD +GR WQCGT+Q+DFNLP R +A YV+  + + +PVM+HRA+ GS ERFIGI+
Sbjct: 465 IEFSLKDCLGRVWQCGTLQLDFNLPIRLSAEYVSEDNSRKNPVMLHRAILGSFERFIGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+++G  P WL+P QA++  IT    ++A E+   L       ++D RNE I +KIREH
Sbjct: 525 IEHYEGAFPAWLAPTQAVIMNITDKQADFALEVEKTLAESGFRAKSDLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
           ++ K+P +++ GD+E   +++ +R      T++ + L ++P+
Sbjct: 585 TLLKVPYLLVIGDREVEMQTVAVR------TREGADLGSMPV 620


>gi|262275836|ref|ZP_06053645.1| threonyl-tRNA synthetase [Grimontia hollisae CIP 101886]
 gi|262219644|gb|EEY70960.1| threonyl-tRNA synthetase [Grimontia hollisae CIP 101886]
          Length = 642

 Score =  649 bits (1674), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 305/641 (47%), Positives = 432/641 (67%), Gaps = 16/641 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPE 65
           +T PDGS ++F    +  DVA  I   LAK  +A  +NGK  D  D + E  ++EIIT +
Sbjct: 4   ITLPDGSQRSFDNPVSTYDVAADIGSGLAKACIAGRVNGKRVDACDLITEDANLEIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ ++P+V++AIGP I++GFYYD D ++  + ++L  IEK+
Sbjct: 64  DEDGLEIIRHSCAHLLGHAIKQLFPDVKMAIGPTIDNGFYYDVDLDRSLTQEDLDAIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M+E+     P +K+ +S ++AR+ FES+ E YK+EIL E++   +   LY   E+ D+CR
Sbjct: 124 MKELAKTKYPVIKKNVSWQEARDTFESRGETYKMEILDENVSRDDRPGLYHHEEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV   G  + F K++ VAGAYWRG+S+  ML RIYGTA++ ++EL  +L  LEE+ KR
Sbjct: 184 GPHVPHMGFCQNF-KILNVAGAYWRGNSDNKMLQRIYGTAFSDKKELKAHLQRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRKL +++DL+H+ ++  G++FWH  GW +F+ L +++R K+ + +Y+E+  P ++D+ 
Sbjct: 243 DHRKLGKQLDLYHMQQEAPGMVFWHHNGWVVFRELEAFVRSKLAEYNYQEVKGPLIMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SGHWD Y   MF  +  +      R +ALKPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWERSGHWDKYADYMFTTQSEN------REYALKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT EQ+  E      ++   YK FGFE I
Sbjct: 357 EFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTPEQVQQEVTSCIKMVYDTYKTFGFEDI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPE RVGSDA+WD AE  +   L+++       I   +L GEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEMRVGSDAMWDRAEKALAEALESMN------IQFEILEGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF LP R  A YV   +E+  PVMIHRA+ GS+ERFIGI+IE + 
Sbjct: 471 HDCLDRAWQCGTVQLDFALPERLGATYVGEDNERHTPVMIHRAILGSLERFIGILIEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G+ P WL+P QA+V  IT +  EY QE+A  L+        D RNE I +KIREH++K++
Sbjct: 531 GHFPSWLAPQQAVVMNITDNQAEYVQEVAKKLQKAGFRASADLRNEKIGFKIREHTLKRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P +++CGD+E     I +R        K  + + I +L  E
Sbjct: 591 PYMLVCGDQEMEAGEIAVRTRKGKDLGKYKIDEFISLLENE 631


>gi|330943371|gb|EGH45740.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. pisi str. 1704B]
          Length = 640

 Score =  649 bits (1673), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 301/642 (46%), Positives = 440/642 (68%), Gaps = 24/642 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP+   +T PDGS ++F    + +DVA SI   LAK  VA  ++GK+ D  D +  +  +
Sbjct: 1   MPT---ITLPDGSQRSFDHAVSVADVALSIGAGLAKATVAGKVDGKLVDACDLIENDACL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           +IITP+D   L +IRHSCAH++  AV+ ++P  ++ IGP+I+DGFYYD   E+PF+ D++
Sbjct: 58  QIITPKDQEGLEIIRHSCAHLVGHAVKQLYPTAKMVIGPVIDDGFYYDIAYERPFTPDDM 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A IE++MQ++I +D   +K+     +  E+F ++ E YK+ ++E +P ++ + LY   E+
Sbjct: 118 AAIEQRMQQLIEKDYDVIKKVTPRAEVIEVFTARHEDYKLRLVEDMPNEQAMGLYYHEEY 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            D+CRGPHV +T +  K FKL K++GAYWRGD+    L R+YGTAW  +++L  Y+  +E
Sbjct: 178 VDMCRGPHVPNT-RFLKSFKLTKLSGAYWRGDAKNEQLQRVYGTAWADKKQLAAYVLRIE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQ 298
           E+EKRDHRK+ + + LFH  E+  G++FWH +GW ++Q L  YMR+  +++ Y EI TPQ
Sbjct: 237 EAEKRDHRKIGKRLGLFHTQEEAPGMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHW +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYREL
Sbjct: 297 VVDRSLWEKSGHWANYADNMFT------TESESRDYAIKPMNCPCHVQVFNQGLKSYREL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFG+ +RNEPSG+LHG+MRVRGFTQDDAH+FCT++QM  E      L + +Y DF
Sbjct: 351 PMRLAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEDQMQAESAAFIKLTLDVYADF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+ I +KLSTRPEKRVGSD LWD AE+ +   LD+        +   +  GEGAFYGPK
Sbjct: 411 GFKDIELKLSTRPEKRVGSDELWDRAESALASALDSAG------LPYDLQPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD +GR WQCGT+Q+DFNLP R +A YV+  + + +PVM+HRA+ GS ERFIGI+
Sbjct: 465 IEFSLKDCLGRVWQCGTLQLDFNLPIRLSAEYVSEDNSRKNPVMLHRAILGSFERFIGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+++G  P WL+P QA++  IT    ++A E+   L       ++D RNE I +KIREH
Sbjct: 525 IEHYEGAFPAWLAPTQAVIMNITDKQADFALEVEKTLAESGFRAKSDLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
           ++ K+P +++ GD+E   +++ +R      T++ + L ++P+
Sbjct: 585 TLLKVPYLLVIGDREVEMQTVAVR------TREGADLGSMPV 620


>gi|326317187|ref|YP_004234859.1| threonyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|323374023|gb|ADX46292.1| threonyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 639

 Score =  649 bits (1673), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 297/615 (48%), Positives = 429/615 (69%), Gaps = 19/615 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I++T PD S + +    + +DVA+SI   LAK  VA  ++G++ D SD +  +  ++IIT
Sbjct: 2   IRITLPDNSQREYDGPVSVADVAQSIGPGLAKMTVAGKVDGRLVDASDVIDHDARLQIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ ++LA IE
Sbjct: 62  PRDQEGVEIIRHSCAHLVGHAVKQLYPTAKMVIGPVIEEGFYYDIAYERPFTPEDLAAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           ++M+E+IA+D   +K+    ++  ++F  + E YK+ ++E +P ++ + LY   E+ D+C
Sbjct: 122 QRMKELIAQDYDVVKKMTPRDEVIQVFRERGEEYKLRLVEDMPDEKAMGLYYHQEYVDMC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +T +  K FKL +V+GAYWRGD+    L RIYGTAW  +++L  Y+  +EE+EK
Sbjct: 182 RGPHVPNT-RFLKVFKLTRVSGAYWRGDAKNEQLQRIYGTAWADKKDLEAYIKRIEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQ 302
           RDHR+L RE+DLFHI E   G +FWH KGW I+Q +  YMR+  +D+ Y+E+  PQ+LD+
Sbjct: 241 RDHRRLGRELDLFHIDEHSPGTVFWHPKGWTIWQGVEQYMRQVYRDNGYQEVKGPQILDK 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
           HLW+++GHWD YR NMF       T  +   +ALKPMNCPGH+ +FN G+KSYR+LP+R 
Sbjct: 301 HLWEKTGHWDKYRENMFT------TESEKHDYALKPMNCPGHILIFNQGVKSYRDLPLRY 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG  +RNEP+G LHG+MRVR FTQDD H+FCT++Q+  EC+   +L+  +YKDFGF  
Sbjct: 355 GEFGQCHRNEPTGGLHGIMRVRAFTQDDGHIFCTEDQIQQECINFTSLLQKVYKDFGFTD 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+ K++TRPEKR+GS+  WD AEN +   ++++K S  D     + +G+GAFYGPK EY 
Sbjct: 415 IIYKVATRPEKRIGSEESWDKAENAL---IESLKASGCD---YQIAVGDGAFYGPKLEYT 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+DAIGR WQCGTIQVD ++P R  A YV    ++  P+++HRA+ GS+ERFIGI+IE  
Sbjct: 469 LRDAIGRHWQCGTIQVDPSMPERLGAEYVGEDGQRHRPIVLHRAIVGSLERFIGILIEQH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIA----NLLKSHHLSIETDFRNETINYKIREH 598
            G LP+WL+P+Q  V  IT +  +Y +EIA      L +  L +E D RNE I YKIREH
Sbjct: 529 AGALPVWLAPVQVAVLNITGAQDDYCREIAAKLQKALPNQGLRVELDLRNEKITYKIREH 588

Query: 599 SIKKIPIIIICGDKE 613
           S++K+P I++ GDKE
Sbjct: 589 SLQKLPYILVVGDKE 603


>gi|257486172|ref|ZP_05640213.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC
           11528]
 gi|331010502|gb|EGH90558.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 640

 Score =  649 bits (1673), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 302/642 (47%), Positives = 438/642 (68%), Gaps = 24/642 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SI 59
           MP+   +T PDGS ++F    + +DVA SI   LAK  VA  ++GK+ D  D +    S+
Sbjct: 1   MPT---ITLPDGSQRSFDHAVSVADVALSIGAGLAKATVAGKVDGKLVDACDLIENDVSL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IITP+D   L +IRHSCAH++  AV+ ++P  ++ IGP+I+DGFYYD   E+PF+ D++
Sbjct: 58  RIITPKDQEGLEIIRHSCAHLVGHAVKQLYPTAKMVIGPVIDDGFYYDIAYERPFTPDDM 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A IE++MQ++I +D   +K+     +  E+F ++ E YK+ ++E +P ++ + LY   E+
Sbjct: 118 AAIEQRMQQLIEKDYDVIKKVTPRAEVIEVFTARHEDYKLRLVEDMPNEQAMGLYYHEEY 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            D+CRGPHV +T +  K FKL K++GAYWRGD+    L R+YGTAW  +++L  Y+  +E
Sbjct: 178 VDMCRGPHVPNT-RFLKSFKLTKLSGAYWRGDAKNEQLQRVYGTAWADKKQLAAYIQRIE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQ 298
           E+EKRDHRK+ + + LFH  E+  G++FWH +GW ++Q L  YMR+  +++ Y EI TPQ
Sbjct: 237 EAEKRDHRKIGKRLGLFHTQEEAPGMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHW +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYREL
Sbjct: 297 VVDRSLWEKSGHWANYADNMFT------TESESRDYAIKPMNCPCHVQVFNQGLKSYREL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFG+ +RNEPSG+LHG+MRVRGFTQDDAH+FCT++QM  E      L + +Y DF
Sbjct: 351 PMRLAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEDQMQAESAAFIKLTLDVYADF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+ I +KLSTRPEKRVGSD LWD AE  +   LD+        +   +  GEGAFYGPK
Sbjct: 411 GFKDIELKLSTRPEKRVGSDELWDRAETALASALDSAG------LPYDLQPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD +GR WQCGT+Q+DFNLP R +A YV+  + + +PVM+HRA+ GS ERFIGI+
Sbjct: 465 IEFSLKDCLGRVWQCGTLQLDFNLPIRLSAEYVSEDNSRKNPVMLHRAILGSFERFIGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+++G  P WL+P QA++  IT    ++A E+   L       ++D RNE I +KIREH
Sbjct: 525 IEHYEGAFPAWLAPTQAVIMNITDKQADFALEVEKTLAESGFRAKSDLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
           ++ K+P +++ GD+E   +++ +R      T++ + L ++P+
Sbjct: 585 TLLKVPYLLVIGDREVEMQTVAVR------TREGADLGSMPV 620


>gi|148284343|ref|YP_001248433.1| threonyl-tRNA synthetase [Orientia tsutsugamushi str. Boryong]
 gi|166225471|sp|A5CD12|SYT_ORITB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|146739782|emb|CAM79649.1| threonyl-tRNA synthetase [Orientia tsutsugamushi str. Boryong]
          Length = 648

 Score =  649 bits (1673), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 308/640 (48%), Positives = 440/640 (68%), Gaps = 17/640 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I +  PDGS+K + +  TG ++ +S+S SL KK +AV IN ++ DL  P+    +++ IT
Sbjct: 2   IDIILPDGSVKQYKIGVTGQEIIQSLSISLFKKTIAVEINNELIDLYIPIINTATVKAIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +  + + ++RH  AHI+A+AV+ ++P+ QV IGP+I+DGFYYDF +++PF++ +L  IE
Sbjct: 62  IDSVQGIEILRHDTAHILAQAVKKLFPDTQVVIGPVIKDGFYYDFARDKPFTNKDLEVIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           ++MQ+IIA++    ++     KA E F+ +KE YKV+++E IP  E +++YRQG + DLC
Sbjct: 122 QEMQDIIAKNDLIQREVWLRAKAIEFFKQQKEFYKVKLIEEIPESEEISIYRQGNFVDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH  STG   K+FKL KV+GAYWRG+S   +L RIYGTAW  + +L  YL+ L E++K
Sbjct: 182 RGPHSPSTGYCTKYFKLTKVSGAYWRGNSKNEVLQRIYGTAWEKKSDLDSYLHRLSEAQK 241

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQ 302
           RDHRKL RE++LFH  ++  G+ FWH KGW IF+ + +Y+  +I +  Y E+NTP VL Q
Sbjct: 242 RDHRKLGRELELFHFQDEAQGMPFWHDKGWTIFKIIKNYISCQIQRAGYIEVNTPMVLSQ 301

Query: 303 HLWQQSGHWDSYRANMFAV---------KCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
            LW++SGHW+ +R NMF +             D+I+     ALKPMNCPGH+ +FN+ +K
Sbjct: 302 KLWEKSGHWEKFRENMFTLDTNVAEKDHNLIKDSIETKCALALKPMNCPGHIQIFNYTIK 361

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYR+LP+R+AEFGS +R EPSG+L+GLMRVR F QDDAH+FCT++Q+ +E +K  +L+  
Sbjct: 362 SYRDLPLRMAEFGSCHRYEPSGALYGLMRVRSFVQDDAHIFCTEDQITDETIKFCHLLKQ 421

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           +Y+DFGF ++ +K S RPEKR G+D +WD AE  +   + T+    +  IN     GEGA
Sbjct: 422 VYQDFGFPEVKIKFSDRPEKRAGTDKIWDKAEQALIHAIQTL--GEEYTINR----GEGA 475

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK E+IL DAIGR+WQCGT+QVDF LP R NA Y++S   K  PV++HRA+ GS ER
Sbjct: 476 FYGPKLEFILTDAIGREWQCGTLQVDFVLPERLNASYISSEGSKKRPVILHRAILGSFER 535

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           FIGI+IE++ G LP+WL+PIQ  V +IT  AV YA+++   L  +++    D  N+ INY
Sbjct: 536 FIGILIEHYSGRLPIWLAPIQVAVVSITDEAVNYAKQLHQELIDNNIRSTLDISNQKINY 595

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
           KIR     K+P+I I G KE+    I IR  GS   Q +S
Sbjct: 596 KIRNFFTAKVPLIAILGKKESESGKIAIRTLGSQEQQVIS 635


>gi|50086067|ref|YP_047577.1| threonyl-tRNA synthetase [Acinetobacter sp. ADP1]
 gi|73919764|sp|Q6F860|SYT_ACIAD RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|49532043|emb|CAG69755.1| threonyl-tRNA synthetase [Acinetobacter sp. ADP1]
          Length = 640

 Score =  648 bits (1672), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 307/642 (47%), Positives = 433/642 (67%), Gaps = 16/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPE 65
           +T P+G  K+F    +   VA+SI   LAK  VA  +N ++ D  D + E  +++IITP+
Sbjct: 4   ITLPNGDQKSFDQPVSVMQVAQSIGPGLAKNTVAGRVNDRLVDACDLITEDATLQIITPK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           DP  + +IRHSCAH++  AV+ ++P+VQ+ IGP+IE+GFYYD    +PF+ D++A IE +
Sbjct: 64  DPEGVEIIRHSCAHLVGHAVKQLFPDVQMVIGPVIEEGFYYDIFSPKPFTLDDMAAIEAR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+++I +D   +K+    E+  + F ++ E YK+ +++ +P +  + LY   E+ D+CRG
Sbjct: 124 MKQLIDQDYDVVKKMTPREQVIQEFTTRGETYKLRLIDDMPEETQMGLYYHQEYVDMCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +T  +K F KL K++GAYWRGD+    L RIYGTAW+ ++EL  Y+  +EE+EKRD
Sbjct: 184 PHVPNTKFLKNF-KLTKISGAYWRGDAKNEQLQRIYGTAWSDKKELAAYIKRIEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHL 304
           HRK+ + +DLFH+ E+  G++FWH  GW I+Q L  YMR+  +D+ Y+E+ TPQ++D  L
Sbjct: 243 HRKIGKALDLFHMQEEAPGMVFWHANGWTIYQALEQYMRKVQQDNGYQEVRTPQIVDFTL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGH  +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYR+LPVRLAE
Sbjct: 303 WEKSGHAANYAENMFT------THSESRNYAVKPMNCPCHVQVFNQGLKSYRDLPVRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNEPSGSLHG+MRVRGFTQDD H+FCTKEQ+  E      L + +YKDFGFE + 
Sbjct: 357 FGSCHRNEPSGSLHGIMRVRGFTQDDGHIFCTKEQIGKEVADFIQLTLDVYKDFGFEDVQ 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +KLSTRPEKRVG D LWD AE  +   LD         +   +  GEGAFYGPK E+ LK
Sbjct: 417 MKLSTRPEKRVGDDRLWDLAEKSLADALDAAG------LEWELQPGEGAFYGPKIEFSLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D +GR WQCGTIQ DFNLP R +A +V   +E+  PVM+HRA+ GS ERFIGI+IE++ G
Sbjct: 471 DCLGRVWQCGTIQCDFNLPIRLDASFVTEDNERDQPVMLHRAILGSFERFIGILIEHYAG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
            +P WL+P+QA V  IT S  E  Q++   LK + L   +D RNE I +KIRE ++++IP
Sbjct: 531 FMPPWLAPVQACVMNITDSQAEACQQVVAKLKENGLRAISDLRNEKIGFKIRERTLERIP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
            +++ GD+E  E ++ +R         +S +DA   L K ++
Sbjct: 591 YLLVLGDREVEEGTVNVRTRSGKNLGTMS-IDAFVDLVKSAV 631


>gi|71735831|ref|YP_274354.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|123747652|sp|Q48JS3|SYT_PSE14 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|71556384|gb|AAZ35595.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola
           1448A]
          Length = 640

 Score =  648 bits (1671), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 301/642 (46%), Positives = 440/642 (68%), Gaps = 24/642 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP+   +T PDGS ++F    + +DVA SI   LAK  VA  ++GK+ D  D +  + S+
Sbjct: 1   MPT---ITLPDGSQRSFDHVVSVADVALSIGAGLAKATVAGKVDGKLVDACDLIENDASL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           +IITP+D   L +IRHSCAH++  AV+ ++P  ++ IGP+I+DGFYYD   E+PF+ D++
Sbjct: 58  QIITPKDQEGLEIIRHSCAHLVGHAVKQLYPTAKMVIGPVIDDGFYYDIAYERPFTPDDM 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A IE++MQ++I +D   +K+     +  E+F ++ E YK+ ++E +P ++ + LY   E+
Sbjct: 118 AAIEQRMQQLIEKDYDVIKKVTPRAEVIEVFTARHEDYKLRLVEDMPNEQAMGLYYHEEY 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            D+CRGPHV +T +  K FKL K++GAYWRGD+    L R+YGTAW  +++L  Y+  +E
Sbjct: 178 VDMCRGPHVPNT-RFLKSFKLTKLSGAYWRGDAKNEQLQRVYGTAWADKKQLAAYIQRIE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQ 298
           E+EKRDHRK+ + + LFH  E+  G++FWH +GW ++Q L  YMR+  +++ Y EI TPQ
Sbjct: 237 EAEKRDHRKIGKRLGLFHTQEEAPGMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHW +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYREL
Sbjct: 297 VVDRSLWEKSGHWANYADNMFT------TESESRDYAIKPMNCPCHVQVFNQGLKSYREL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFG+ +RNEPSG+LHG+MRVRGFTQDDAH+FCT++QM  E      L + +Y DF
Sbjct: 351 PMRLAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEDQMQAESAAFIKLTLDVYADF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+ I +KLSTRPEKRVGSD LW+ AE  +   LD+        +   +  GEGAFYGPK
Sbjct: 411 GFKDIELKLSTRPEKRVGSDELWERAETALASALDSAG------LPYDLQPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD +GR WQCGT+Q+DFNLP R +A YV+  + + +PVM+HRA+ GS ERFIGI+
Sbjct: 465 IEFSLKDCLGRVWQCGTLQLDFNLPIRLSAEYVSEDNSRKNPVMLHRAILGSFERFIGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+++G  P WL+P QA++  IT    ++A E+   L       ++D RNE I +KIREH
Sbjct: 525 IEHYEGAFPAWLAPTQAVIMNITDKQADFALEVEKTLAESGFRAKSDLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
           ++ K+P +++ GD+E   +++ +R      T++ + L ++P+
Sbjct: 585 TLLKVPYLLVIGDREVEMQTVAVR------TREGADLGSMPV 620


>gi|238021043|ref|ZP_04601469.1| hypothetical protein GCWU000324_00940 [Kingella oralis ATCC 51147]
 gi|237868023|gb|EEP69029.1| hypothetical protein GCWU000324_00940 [Kingella oralis ATCC 51147]
          Length = 637

 Score =  648 bits (1671), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 297/626 (47%), Positives = 429/626 (68%), Gaps = 20/626 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEI 61
           S + +T PDGS++ +    T + +A  I   LAK  VA  +NG + D SDP+ E  S++I
Sbjct: 2   SQLNITLPDGSVRQYESPTTIAQIAADIGAGLAKATVAGKVNGILRDASDPITEDASVQI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           ITP+DP  + +IRHSCAH++  AV+ ++P V++ IGP+IEDGFYYD   E+PF+ +++A 
Sbjct: 62  ITPKDPEGVEIIRHSCAHLVGHAVKQLFPSVKMVIGPVIEDGFYYDIFSEKPFTPEDIAA 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVT---LYRQGE 178
           IE +M+E+I +D   +K+     +  E+F+ + E YK+ +++ +   +++T   +Y   E
Sbjct: 122 IETRMKELINQDYDVIKKMTPRAEVIEIFKQRGEDYKLRLIDDMA--DDITAMGMYYHQE 179

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +T  +K F KL KV+GAYWRGDSN   L RIYGTAW  + +L  Y+  +
Sbjct: 180 YVDMCRGPHVPNTRFLKNF-KLTKVSGAYWRGDSNNEQLQRIYGTAWANKDDLKAYITRI 238

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+EKRDHRKL +++DLFH+ ++  G++FWH +GW ++Q +  +MRR++    Y+E+ TP
Sbjct: 239 EEAEKRDHRKLGKQLDLFHLQDEAPGMVFWHPRGWTLWQVIEQHMRRELTAAGYQEVKTP 298

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           Q++D+  W++SGHW +Y+ NMF       T  + R +A+KPMNCPGHV +FNHGL+SY +
Sbjct: 299 QIMDKTFWEKSGHWANYKDNMFL------TSSEKRDYAVKPMNCPGHVQIFNHGLRSYND 352

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+RLAEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+  E    + L++ IY+ 
Sbjct: 353 LPMRLAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIAEETRAFNQLVMKIYRQ 412

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF  + +KLS RPEKR GSD +WD AE  ++  L     + Q+      L GEGAFYGP
Sbjct: 413 FGFHDVSIKLSLRPEKRAGSDEIWDKAEQGLRDALTACGVTWQE------LPGEGAFYGP 466

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K EY +KDA+GR WQCGTIQ+DF LP R +A YV   + +  PVM+HRA+ GS+ERFIGI
Sbjct: 467 KVEYHIKDALGRSWQCGTIQLDFVLPERLDAEYVTRDNNRARPVMLHRAILGSLERFIGI 526

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE   G+ PLWL+P+Q +V  IT    +Y +E+   L++     E D RNE I YKIR+
Sbjct: 527 LIEQHAGSFPLWLAPVQMVVMNITEKQADYCREVVAKLQAAGFRAELDLRNEKIGYKIRD 586

Query: 598 HSIKKIPIIIICGDKEASERSIGIRR 623
           +S ++ P  I+ GDKE     + +R+
Sbjct: 587 NSSQRYPYQIVVGDKEMENGQVAVRK 612


>gi|254489788|ref|ZP_05102983.1| threonyl-tRNA synthetase [Methylophaga thiooxidans DMS010]
 gi|224464873|gb|EEF81127.1| threonyl-tRNA synthetase [Methylophaga thiooxydans DMS010]
          Length = 673

 Score =  648 bits (1671), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 299/648 (46%), Positives = 434/648 (66%), Gaps = 15/648 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           IK+  PDGS + F    +   +A+SI   LA+  +A  ING++ D    +  +  + IIT
Sbjct: 12  IKIRLPDGSQRTFDRPVSIQGIAKSIGEGLARSTIAGKINGELHDACTMIHHDADVTIIT 71

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+DP  + +IRHS AH+   AV+ ++P  ++ IGP+IEDGFYYD D E  F+ D+LA I+
Sbjct: 72  PKDPEGIEIIRHSTAHLFGHAVKQLFPATRMVIGPVIEDGFYYDIDSEHRFTPDDLASIQ 131

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-ENVTLYRQGEWFDL 182
           ++M+ +       + +      AR LFE++ E YKV +++ +    +NV LY   E+ D+
Sbjct: 132 QRMETLANTAYDVVLKKTPKADARALFEARGETYKVRLIDEMDDDVKNVGLYYHQEYVDM 191

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +    K F  L K+AGAYWRGD+N  ML RIYGTAW+ ++ L  YL+ +EE+E
Sbjct: 192 CRGPHVPNMAFCKAF-SLTKLAGAYWRGDANNEMLQRIYGTAWSDKKALKAYLHQMEEAE 250

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLD 301
           KRDHR+L +++DLFH  E+  G +FWH KGW+I Q LI+Y+RR+ + + Y E+N+P V+D
Sbjct: 251 KRDHRRLGKQLDLFHFQEEAPGSVFWHHKGWQILQELIAYLRRRQQQEGYIEVNSPDVMD 310

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW +YR +MF  + AD      R FALKPMNCPG V ++   L SYR+LP+R
Sbjct: 311 RSLWETSGHWQNYRDHMFTTETADG-----RFFALKPMNCPGSVLLYRQNLTSYRDLPIR 365

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           ++EFG V+R EPSG+LHGL+RVR FTQDDAH++CT+ QM +EC+     I+ +Y   GF 
Sbjct: 366 MSEFGKVHRYEPSGTLHGLLRVRHFTQDDAHIYCTQSQMQDECMSAIRFILDVYDQLGFH 425

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            I +KLSTRPE R+G+D  WD  E  +   L+ +K   Q         GEGAFYGPK E+
Sbjct: 426 DIKIKLSTRPEHRIGTDETWDLLEETLIESLNELKLDYQTNP------GEGAFYGPKLEF 479

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
           +L+DAI RDWQCGT+QVD NLP RF+  YV+++  K  PVM+HRA+FGS+ERFIGI++E+
Sbjct: 480 VLQDAIKRDWQCGTLQVDMNLPERFDLDYVDNNGLKQRPVMLHRALFGSLERFIGILLEH 539

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           ++G LP+WL PIQ ++  I+ +   Y +++A +L+ H L + TD R+E I YKIR+H+++
Sbjct: 540 YEGKLPVWLMPIQLVICAISDANATYVEQLATVLRYHGLRVSTDTRSEKIGYKIRQHTLQ 599

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPD 649
           +IP I + GDKE +  ++ IR+    T   +S+ + I  L++ +  PD
Sbjct: 600 RIPYIAVAGDKEQASNTLSIRQQNGDTMGSLSIKETINTLSEAAQKPD 647


>gi|254498720|ref|ZP_05111436.1| threonyl tRNA synthase [Legionella drancourtii LLAP12]
 gi|254352048|gb|EET10867.1| threonyl tRNA synthase [Legionella drancourtii LLAP12]
          Length = 648

 Score =  647 bits (1670), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 317/646 (49%), Positives = 441/646 (68%), Gaps = 18/646 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP +IKL  PDGS+K+F    T  DVA +IS  LAK A+A  ++G++ D S  +  + S+
Sbjct: 10  MP-NIKL--PDGSVKHFEAPLTVYDVAHNISPGLAKAALAGRVDGRLVDTSYLMEHDCSL 66

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +   SL VIRHS AH++A+AV+S++P  QV IGP+IEDGFYYDF  ++PF+ ++L
Sbjct: 67  VIITEKQEESLEVIRHSTAHLLAQAVKSLFPSAQVTIGPVIEDGFYYDFSFQRPFTPEDL 126

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            QIE KM E+   + P  ++ L  ++A   F+   E YK +I+  IPA E ++LY+QG++
Sbjct: 127 EQIEAKMMELAKANYPITRRELPRDEAINYFKDIGEEYKAKIIADIPATEVLSLYKQGDF 186

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV +TG +K F KL K+AGAYWRGDSN  ML RIYGTAW  ++ L  YL+ +E
Sbjct: 187 EDLCRGPHVPATGFLKAF-KLTKLAGAYWRGDSNNEMLQRIYGTAWADKKSLADYLFRIE 245

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+EKRDHRKL + ++LFH  +   G++FWH KGW I+Q L  YMR ++ D  Y+EI TPQ
Sbjct: 246 EAEKRDHRKLGKTLELFHFQDIAPGMVFWHPKGWTIYQELERYMRARLADFGYQEIKTPQ 305

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D+ LW++SGHW ++R  MF       T  D R +A+KPMNCP H+ V+N GLKSYR+L
Sbjct: 306 LVDKVLWEKSGHWANFRDEMFV------TETDNRHYAVKPMNCPCHIQVYNQGLKSYRDL 359

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R +EFG+ +R EPSGSLHGLMRVR   QDDAH+FCT++Q+ +E   +  L+ S+Y DF
Sbjct: 360 PLRFSEFGNCHRCEPSGSLHGLMRVRNMVQDDAHIFCTEDQIQSEVDMMLQLVQSVYTDF 419

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF +I  +L+ RPEKRVG D +WD AE  +K     +K+ + + ++     GEGAFYGPK
Sbjct: 420 GFNEIKYRLALRPEKRVGGDDVWDKAEAALK---QAMKDRTIEWVDAP---GEGAFYGPK 473

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E  L D +GR WQCGTIQVDF++P R +A Y+     K  PVM+HRA+ GS ERF+GI+
Sbjct: 474 IECSLSDCLGRIWQCGTIQVDFSMPGRLDASYIAEDGSKQIPVMLHRAILGSFERFMGIL 533

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE++ G LPLWLSP+QA V TI+    +YAQ++  +L+   L    D RNE I +KIREH
Sbjct: 534 IEHYAGKLPLWLSPVQAAVLTISEKQNDYAQQVTQILQKRGLRANFDLRNEKIGFKIREH 593

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +++K+P +++ GDKE     + +R    T    +++      LT+E
Sbjct: 594 TLQKVPYLLVIGDKEVESGQVAVRSREGTDLGVMTIDTVCDTLTQE 639


>gi|330829614|ref|YP_004392566.1| Threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Aeromonas
           veronii B565]
 gi|328804750|gb|AEB49949.1| Threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Aeromonas
           veronii B565]
          Length = 642

 Score =  647 bits (1670), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 297/641 (46%), Positives = 435/641 (67%), Gaps = 16/641 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  DVA  I   LAK  +A  +NG++ D  + +  + ++ IIT +
Sbjct: 4   ITLPDGSQRQFAHSVSVMDVAADIGPGLAKACIAGRVNGELVDACELIEADAALAIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L ++RHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D ++  + ++LA +E++
Sbjct: 64  DEEGLDILRHSCAHLLGHAIKQLWPQTKMAIGPVIDNGFYYDVDLDRTLTDEDLAALEER 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M  ++A+D   +K+ +S ++AR++FE++ E+YKVEIL ++I   +   LY   E+ D+CR
Sbjct: 124 MLALVAKDYDVIKKKVSWQEARDVFEARGESYKVEILDQNIARDDQPGLYHHEEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +      F KL+K++GAYWRGDSN  ML RIYGTAW  +++L  YL  LEE+ KR
Sbjct: 184 GPHVPNMRHCHHF-KLLKMSGAYWRGDSNNKMLQRIYGTAWADKKQLKAYLQRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF+ L +++R K+K+ DY+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELETFIRGKLKEYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SGHW+ Y   MF  +  +      R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWERSGHWEKYAQAMFTTQSEN------REYAIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+  E      ++  +Y  FGFE I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIMEEVSGCIRMVYDVYGTFGFENI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPE+R+GSD +WD AE  +   L+       + +   +  GEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEQRIGSDEMWDRAEKALAEALEL------NGLKYDLQPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF LP R  A YV  ++++  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 HDCLDRAWQCGTVQLDFALPGRLGATYVGENNDRHVPVMIHRAILGSIERFIGILTEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P QA+V  IT +  +YA ++A  L    L  + D RNE I +KIREH++K++
Sbjct: 531 GLFPTWLAPTQAVVMNITDNQADYAVKVAKALNDAGLRAKADLRNEKIGFKIREHTLKRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P +++CGDKE     I +R           + + I +LT+E
Sbjct: 591 PFMLVCGDKEVEAGKIAVRTRKGADLGTYPVEEFIALLTQE 631


>gi|169797157|ref|YP_001714950.1| threonyl-tRNA synthetase [Acinetobacter baumannii AYE]
 gi|184156915|ref|YP_001845254.1| threonyl-tRNA synthetase [Acinetobacter baumannii ACICU]
 gi|215484620|ref|YP_002326855.1| threonyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
 gi|239500701|ref|ZP_04660011.1| threonyl-tRNA synthetase [Acinetobacter baumannii AB900]
 gi|301510743|ref|ZP_07235980.1| threonyl-tRNA synthetase [Acinetobacter baumannii AB058]
 gi|332856896|ref|ZP_08436305.1| threonine--tRNA ligase [Acinetobacter baumannii 6013150]
 gi|332867201|ref|ZP_08437466.1| threonine--tRNA ligase [Acinetobacter baumannii 6013113]
 gi|332874008|ref|ZP_08441943.1| threonine--tRNA ligase [Acinetobacter baumannii 6014059]
 gi|226701398|sp|B7H005|SYT_ACIB3 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|238685492|sp|A3M299|SYT_ACIBT RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|238688031|sp|B0V5P2|SYT_ACIBY RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|238690968|sp|B2HTH0|SYT_ACIBC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|169150084|emb|CAM87978.1| threonyl-tRNA synthetase [Acinetobacter baumannii AYE]
 gi|183208509|gb|ACC55907.1| Threonyl-tRNA synthetase [Acinetobacter baumannii ACICU]
 gi|193076379|gb|ABO11043.2| threonyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978]
 gi|213985706|gb|ACJ56005.1| threonyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
 gi|322506811|gb|ADX02265.1| thrS [Acinetobacter baumannii 1656-2]
 gi|323516680|gb|ADX91061.1| threonyl-tRNA synthetase [Acinetobacter baumannii TCDC-AB0715]
 gi|332726950|gb|EGJ58455.1| threonine--tRNA ligase [Acinetobacter baumannii 6013150]
 gi|332734140|gb|EGJ65272.1| threonine--tRNA ligase [Acinetobacter baumannii 6013113]
 gi|332737749|gb|EGJ68641.1| threonine--tRNA ligase [Acinetobacter baumannii 6014059]
          Length = 640

 Score =  647 bits (1669), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 309/642 (48%), Positives = 437/642 (68%), Gaps = 16/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPE 65
           +T P+G  K+F    +  +VA+SI   LAK  VA  +N ++ D  D + E S ++IITP+
Sbjct: 4   ITLPNGDQKSFDHPVSVMEVAQSIGPGLAKNTVAGRVNDRLVDACDLITEDSTLQIITPK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  AV+ ++PE ++ IGP+IE+GFYYD    +PF+ D++A IE++
Sbjct: 64  DEEGLEIIRHSCAHLVGHAVKQLFPEAKMVIGPVIEEGFYYDIWMPRPFTLDDMAAIEER 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+++I +D   +K+    ++  ++F  + E YK+ ++E +P ++ + LY   E+ D+CRG
Sbjct: 124 MKKLIDQDYDVIKKMTPRDEVIKVFTDRGEEYKLRLVEDMPEEKAMGLYYHQEYVDMCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +T  +K F KL K++GAYWRGD+    L RIYGTAW  +++L  Y+  +EE+EKRD
Sbjct: 184 PHVPNTKFLKSF-KLTKISGAYWRGDAKNEQLQRIYGTAWADKKQLAAYIKRIEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHL 304
           HRK+ + +DLFH+ E+  G++FWH  GW I+Q L  YMR+  +D+ Y+EI TPQ++D  L
Sbjct: 243 HRKIGKALDLFHMQEEAPGMVFWHANGWTIYQVLEQYMRKVQQDNGYQEIKTPQIVDFTL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGH  +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYR+LP+RLAE
Sbjct: 303 WEKSGHAANYAENMFT------THSESRNYAVKPMNCPCHVQVFNQGLKSYRDLPIRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNEPSGSLHG+MRVRGFTQDDAH+FCTKEQ+  E      L + +YKDFGFE++ 
Sbjct: 357 FGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTKEQIGKEVADFIKLTLDVYKDFGFEEVQ 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +KLSTRPEKRVG DALWD AE  +   LD         +   +  GEGAFYGPK E+ LK
Sbjct: 417 MKLSTRPEKRVGDDALWDLAEKSLADALDAAG------LEWELQPGEGAFYGPKIEFSLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D +GR WQCGTIQ DFNLP R +A YV   +E+  PVM+HRA+ GS ERFIGI+IE++ G
Sbjct: 471 DCLGRVWQCGTIQCDFNLPVRLDASYVTEENERDQPVMLHRAILGSFERFIGILIEHYAG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
            +P WLSP+QA V  IT S  E ++++   LK + L   +D RNE I +KIRE ++++IP
Sbjct: 531 FMPPWLSPVQACVMNITDSQAEASEQVVAKLKENGLRAISDLRNEKIGFKIRERTLERIP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
            +++ GD+E  E ++ +R         +S +DA   L K ++
Sbjct: 591 YLLVLGDREVEEGTVNVRTRSGKNLGTMS-VDAFIDLVKSAV 631


>gi|311693962|gb|ADP96835.1| threonyl-tRNA synthetase [marine bacterium HP15]
          Length = 641

 Score =  647 bits (1669), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 307/618 (49%), Positives = 432/618 (69%), Gaps = 15/618 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS ++F    T  DVA  I   LAK A+A  ++G++ D S  +  +  + I+T  
Sbjct: 4   VTLPDGSHRSFAEPVTVHDVAADIGAGLAKAALAGKVDGQLVDTSYRIENDAELAIVTER 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   + VIRHS AH+MA AVQ ++P  QV IGP+I++GFYYDF  ++PF++++LA+IEK+
Sbjct: 64  DEEGVDVIRHSTAHLMAMAVQELFPGAQVTIGPVIDNGFYYDFKYDRPFTNEDLARIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+E+  +D P  +  +S ++A +LFE   E YKV I++ IP +E+++ Y QG++ DLCRG
Sbjct: 124 MEELSKQDLPVSRSIMSRDEAIKLFEDMGEEYKVRIIQDIPGEEDLSFYSQGDFIDLCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV STG++K F KL KVAGAYWRGD++   L R+YGTAW  +++L  YL+ LEE+EKRD
Sbjct: 184 PHVPSTGKLKAF-KLTKVAGAYWRGDTSNEQLQRVYGTAWGNKKDLKAYLHRLEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHL 304
           HRK+ +++ LFH+ E+  G++FWH  GW ++Q +  YMRRK ++  Y+EI TPQV+ ++L
Sbjct: 243 HRKVGKKLGLFHMQEEAPGMVFWHPDGWSLYQEIEQYMRRKQQEHGYKEIKTPQVVSRNL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHWD ++ +MF       T  +   +A+KPMNCP HV VFN GLKSY++LP+RLAE
Sbjct: 303 WEKSGHWDKFKDDMFT------TESEKHDYAIKPMNCPCHVQVFNQGLKSYKDLPLRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNE SG+LHGLMRVRGFTQDDAH+FC ++ +  E      ++  IY DFGF +I+
Sbjct: 357 FGSCHRNEASGALHGLMRVRGFTQDDAHIFCEEDAIQQEVSSFIEMLHEIYTDFGFTEIL 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
            KLSTRPEKRVGSD +WD AE  ++  L+      ++ ++  +L GEGAFYGPK E+ LK
Sbjct: 417 YKLSTRPEKRVGSDEVWDKAEAALEEALN------REGVDWELLPGEGAFYGPKIEFSLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D IGR WQCGTIQVDF++P R  A YV  +SE+  PVM+HRAV GS ERFIGI+IE ++G
Sbjct: 471 DCIGRVWQCGTIQVDFSMPGRLGAQYVADNSERKTPVMLHRAVLGSFERFIGILIEEYEG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P WL+P Q  +  IT +  +Y Q +A    S    +  D RNE I +KIREH++ K+P
Sbjct: 531 AFPTWLAPTQVAILNITDNQRDYCQNLAKKWDSLGYRVNADLRNEKIGFKIREHTLNKVP 590

Query: 605 IIIICGDKEASERSIGIR 622
            +++ GDKE    ++ +R
Sbjct: 591 YLVVVGDKEVENNAVAVR 608


>gi|260556061|ref|ZP_05828280.1| threonyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606]
 gi|260410116|gb|EEX03415.1| threonyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606]
          Length = 640

 Score =  647 bits (1668), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 309/642 (48%), Positives = 436/642 (67%), Gaps = 16/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPE 65
           +T P+G  K+F    +  +VA+SI   LAK  VA  +N ++ D  D + E S ++IITP+
Sbjct: 4   ITLPNGDQKSFDHPVSVMEVAQSIGPGLAKNTVAGRVNDRLVDACDLITEDSTLQIITPK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  AV+ ++PE ++ IGP+IE+GFYYD    +PF+ D++A IE++
Sbjct: 64  DEEGLEIIRHSCAHLVGHAVKQLFPEAKMVIGPVIEEGFYYDIWMPRPFTLDDMAAIEER 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+++I +D   +K+    ++   +F  + E YK+ ++E +P ++ + LY   E+ D+CRG
Sbjct: 124 MKKLIDQDYDVIKKMTPRDEVIRVFTDRGEEYKLRLVEDMPEEKAMGLYYHQEYVDMCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +T  +K F KL K++GAYWRGD+    L RIYGTAW  +++L  Y+  +EE+EKRD
Sbjct: 184 PHVPNTKFLKSF-KLTKISGAYWRGDAKNEQLQRIYGTAWADKKQLAAYIKRIEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHL 304
           HRK+ + +DLFH+ E+  G++FWH  GW I+Q L  YMR+  +D+ Y+EI TPQ++D  L
Sbjct: 243 HRKIGKALDLFHMQEEAPGMVFWHANGWTIYQVLEQYMRKVQQDNGYQEIKTPQIVDFTL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGH  +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYR+LP+RLAE
Sbjct: 303 WEKSGHAANYAENMFT------THSESRNYAVKPMNCPCHVQVFNQGLKSYRDLPIRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNEPSGSLHG+MRVRGFTQDDAH+FCTKEQ+  E      L + +YKDFGFE++ 
Sbjct: 357 FGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTKEQIGKEVADFIKLTLDVYKDFGFEEVQ 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +KLSTRPEKRVG DALWD AE  +   LD         +   +  GEGAFYGPK E+ LK
Sbjct: 417 MKLSTRPEKRVGDDALWDLAEKSLADALDAAG------LEWELQPGEGAFYGPKIEFSLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D +GR WQCGTIQ DFNLP R +A YV   +E+  PVM+HRA+ GS ERFIGI+IE++ G
Sbjct: 471 DCLGRVWQCGTIQCDFNLPVRLDASYVTEENERDQPVMLHRAILGSFERFIGILIEHYAG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
            +P WLSP+QA V  IT S  E ++++   LK + L   +D RNE I +KIRE ++++IP
Sbjct: 531 FMPPWLSPVQACVMNITDSQAEASEQVVAKLKENGLRAISDLRNEKIGFKIRERTLERIP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
            +++ GD+E  E ++ +R         +S +DA   L K ++
Sbjct: 591 YLLVLGDREVEEGTVNVRTRSGKNLGTMS-VDAFIDLVKSAV 631


>gi|159903594|ref|YP_001550938.1| threonyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
 gi|238687108|sp|A9BAX2|SYT_PROM4 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|159888770|gb|ABX08984.1| Threonyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
          Length = 638

 Score =  647 bits (1668), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 301/639 (47%), Positives = 433/639 (67%), Gaps = 15/639 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDG+ K F    T +D+A  I   LA  A+A  +N  + D+S P+  +  I+IIT +
Sbjct: 4   ITLPDGTKKEFSGSITIADIASDIGPGLASAAIAGKVNQDLVDISIPIDYDAEIKIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   + +IRHS AH++  AV+ ++P+ ++AIGPIIEDGFYYD    + F+ ++LA+IE++
Sbjct: 64  DKEGVEIIRHSFAHLIGHAVKQLYPDAKMAIGPIIEDGFYYDISYSKTFTPEDLARIEER 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           ++++I  +   + + +S +KA   F+ + E YKVEI+ +IP  E + LY+  E+ D+CRG
Sbjct: 124 IKDLIKLNYDVVVEIVSRDKALNTFKDRNEPYKVEIINNIPEGETIKLYKHQEYIDMCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +T  +  F KLM+V+GAYWRGDS+  ML RIYGTAW  +++L  Y+  LEE+EKRD
Sbjct: 184 PHVPNTKHLNSF-KLMRVSGAYWRGDSDNEMLQRIYGTAWANKKDLKAYINRLEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDY-EEINTPQVLDQHL 304
           HRK+ ++MDLFH  E+  G++FWH  GW I+Q L  Y+R  + ++Y +E+ TPQ +D+ L
Sbjct: 243 HRKIGKKMDLFHTQEEAPGMVFWHPNGWSIYQVLEKYIRDVLNNNYYQEVKTPQAVDRSL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHWD ++ +MF       T  + R +A+KPMNCP H+ +FN GLKSYR+LP+RLAE
Sbjct: 303 WEKSGHWDKFKDDMFT------TTSENREYAIKPMNCPCHIQIFNQGLKSYRDLPIRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNEPSG+LHGLMRVR F QDDAH+FCT+ Q+ +E     +L+  +YK FGF +I+
Sbjct: 357 FGSCHRNEPSGALHGLMRVRNFVQDDAHIFCTEAQVQSEVSNFIDLVFEVYKSFGFNEII 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +KLSTRP+KRVGS+ +WD +E  +   L++        ++   L GEGAFYGPK E+ LK
Sbjct: 417 IKLSTRPKKRVGSEFIWDKSEKALSEALNS------KGLDWSYLPGEGAFYGPKIEFSLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D + R WQCGTIQVDF++PSR  A Y++   EK  PVM+HRA+ GS ERFIGI+IEN+ G
Sbjct: 471 DCLNRVWQCGTIQVDFSMPSRLEAKYIDEKGEKKEPVMLHRAILGSFERFIGILIENYAG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
           N P+WL+P+Q IV  IT       + +   L +    ++ D RNE I +KIREH++ +IP
Sbjct: 531 NFPVWLAPVQIIVMGITDRNSSCCESLTTKLINKGYRVKLDLRNEKIGFKIREHTLNRIP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            ++I GDKE  E  I +R         +SL + + IL K
Sbjct: 591 YLLIIGDKEEKEGKIAVRTREGNDMGSISLEEFLVILNK 629


>gi|213156053|ref|YP_002318098.1| threonyl-tRNA synthetase [Acinetobacter baumannii AB0057]
 gi|301346223|ref|ZP_07226964.1| threonyl-tRNA synthetase [Acinetobacter baumannii AB056]
 gi|301596041|ref|ZP_07241049.1| threonyl-tRNA synthetase [Acinetobacter baumannii AB059]
 gi|226701414|sp|B7I688|SYT_ACIB5 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|213055213|gb|ACJ40115.1| threonyl-tRNA synthetase [Acinetobacter baumannii AB0057]
          Length = 640

 Score =  646 bits (1667), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 309/642 (48%), Positives = 437/642 (68%), Gaps = 16/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPE 65
           +T P+G  K+F    +  +VA+SI   LAK  VA  +N ++ D  D + E S ++IITP+
Sbjct: 4   ITLPNGDQKSFDHPVSVMEVAQSIGPGLAKNTVAGRVNDRLVDACDLITEDSTLQIITPK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  AV+ ++PE ++ IGP+IE+GFYYD    +PF+ D++A IE++
Sbjct: 64  DEEGLEIIRHSCAHLVGHAVKQLFPEAKMVIGPVIEEGFYYDIWMPRPFTLDDMAAIEER 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+++I +D   +K+    ++  ++F  + E YK+ ++E +P ++ + LY   E+ D+CRG
Sbjct: 124 MKKLIDQDYDVIKKMTPRDEVIKVFTDRGEEYKLRLVEDMPEEKAMGLYYHQEYVDMCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +T  +K F KL K++GAYWRGD+    L RIYGTAW  +++L  Y+  +EE+EKRD
Sbjct: 184 PHVPNTKFLKSF-KLTKISGAYWRGDAKNEQLQRIYGTAWADKKQLAAYIKRIEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHL 304
           HRK+ + +DLFH+ E+  G++FWH  GW I+Q L  YMR+  +D+ Y+EI TPQ++D  L
Sbjct: 243 HRKIGKALDLFHMQEEAPGMVFWHANGWTIYQVLEQYMRKVQQDNGYQEIKTPQIVDFTL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGH  +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYR+LP+RLAE
Sbjct: 303 WEKSGHAANYVENMFT------THSESRNYAVKPMNCPCHVQVFNQGLKSYRDLPIRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNEPSGSLHG+MRVRGFTQDDAH+FCTKEQ+  E      L + +YKDFGFE++ 
Sbjct: 357 FGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTKEQIGKEVADFIKLTLDVYKDFGFEEVQ 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +KLSTRPEKRVG DALWD AE  +   LD         +   +  GEGAFYGPK E+ LK
Sbjct: 417 MKLSTRPEKRVGDDALWDLAEKSLADALDAAG------LEWELQPGEGAFYGPKIEFSLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D +GR WQCGTIQ DFNLP R +A YV   +E+  PVM+HRA+ GS ERFIGI+IE++ G
Sbjct: 471 DCLGRVWQCGTIQCDFNLPVRLDASYVTEENERDQPVMLHRAILGSFERFIGILIEHYAG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
            +P WLSP+QA V  IT S  E ++++   LK + L   +D RNE I +KIRE ++++IP
Sbjct: 531 FMPPWLSPVQACVMNITDSQAEASEQVVAKLKENGLRAISDLRNEKIGFKIRERTLERIP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
            +++ GD+E  E ++ +R         +S +DA   L K ++
Sbjct: 591 YLLVLGDREVEEGTVNVRTRSGKNLGTMS-VDAFIDLVKSAV 631


>gi|189183871|ref|YP_001937656.1| threonyl-tRNA synthetase [Orientia tsutsugamushi str. Ikeda]
 gi|238692247|sp|B3CSS5|SYT_ORITI RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|189180642|dbj|BAG40422.1| threonyl-tRNA synthetase [Orientia tsutsugamushi str. Ikeda]
          Length = 648

 Score =  646 bits (1667), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 307/640 (47%), Positives = 438/640 (68%), Gaps = 17/640 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I +  PDGS+K + +  TG ++ +S+S SL KK +AVA+N ++ DL  P+    +++ IT
Sbjct: 2   IDIILPDGSVKQYKIGVTGQEIIQSLSISLFKKTIAVAVNNELMDLYIPIINTATVKAIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +  + + ++RH  AHI+A+AV+ ++P+ QV IGP+I+DGFYYDF +++PF+S +L  IE
Sbjct: 62  IDSVQGIEILRHDTAHILAQAVKKLFPDTQVVIGPVIKDGFYYDFARDKPFTSKDLEIIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           ++MQ+II ++    ++     KA E F+ +KE YKV+++E IP  E +++YRQG + DLC
Sbjct: 122 QEMQDIITKNDLIQREVWLRAKAIEFFKQQKEFYKVKLIEEIPESEEISIYRQGNFVDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH  STG   K+FKL KV+GAYWRG+S    L RIYGTAW  + +L  YL+ L E++K
Sbjct: 182 RGPHSPSTGYCAKYFKLTKVSGAYWRGNSKNESLQRIYGTAWGKKSDLDSYLHRLSEAQK 241

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQ 302
           RDHRKL RE++LFH  ++  G+ FWH KGW IF+ +  Y+  +I +  Y E+NTP VL+Q
Sbjct: 242 RDHRKLGRELELFHFQDEAQGMPFWHSKGWTIFKIIKDYISCQIQRAGYIEVNTPMVLNQ 301

Query: 303 HLWQQSGHWDSYRANMFAV---------KCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
            LW++SGHW+ +R NMF +             D+I+     ALKPMNCPGH+ +FN+ +K
Sbjct: 302 KLWEKSGHWEKFRENMFTLDTNAAEQDHNLIKDSIETKCALALKPMNCPGHIQIFNYTIK 361

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYR+LP+R+AEFGS +R EPSG+L+GLMRVR F QDDAH+FCT++Q+ +E +K  +L+  
Sbjct: 362 SYRDLPLRMAEFGSCHRYEPSGALYGLMRVRSFVQDDAHIFCTEDQITDETIKFCHLLKQ 421

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           +Y+DFGF ++ +K S RPEKR G+D +WD AE  +   + T+    +  IN     GEGA
Sbjct: 422 VYQDFGFPEVKIKFSDRPEKRAGTDKIWDKAEQALIHAIQTL--GEEYTINR----GEGA 475

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK E+IL DAIGR+WQCGT+QVDF LP R NA Y++S   K  PV++HRA+ GS ER
Sbjct: 476 FYGPKLEFILTDAIGREWQCGTLQVDFVLPERLNASYISSEGSKKRPVILHRAILGSFER 535

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           FIGI+IE++ G LP+WL+PIQ  V +IT  AV YA+++   L  +++    D  N+ INY
Sbjct: 536 FIGILIEHYSGKLPIWLAPIQVAVVSITDEAVNYAKQLHQELIDNNIRSTLDISNQKINY 595

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
           KIR     K+P+I I G KE+    I IR  GS     +S
Sbjct: 596 KIRNFFTAKVPLIAILGKKESESGKIAIRTLGSQEQHVIS 635


>gi|33152811|ref|NP_874164.1| threonyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
 gi|71153574|sp|Q7VKR9|SYT_HAEDU RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|33149036|gb|AAP96553.1| threonyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
          Length = 643

 Score =  646 bits (1667), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 298/619 (48%), Positives = 427/619 (68%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPE 65
           +T PDGS +NF    +  +VA+SI   LAK  +A  +NG+  D  D + + S +EIIT +
Sbjct: 4   ITLPDGSQRNFDNPVSVIEVAQSIGTGLAKATIAGRVNGERRDACDIIEQDSTLEIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ ++P V++AIGP IE+GFYYD D ++  + D+L  IEK+
Sbjct: 64  DEDGLEIIRHSCAHLLGHAIKQLFPTVKMAIGPTIENGFYYDVDLDRTLTQDDLEAIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K+ +S ++AR+ FE + E YK+ IL E+I       LY   E+ D+CR
Sbjct: 124 MLELAKTNYNVVKKPVSWQQARDTFEKRGEPYKIAILDENIERTATPALYHHEEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +  + FKL KVAGAYWRGDS   ML RIYGTAW  +++LT+YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCQHFKLQKVAGAYWRGDSKNKMLQRIYGTAWADKKQLTEYLTRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHR++ + +DL+H+ E+  G++FWH  GW IF+ L +++R K+K+ DY+E+  P ++D+ 
Sbjct: 243 DHRRIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW +Y   MF  +  +      R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWERTGHWQNYADLMFTTQSEN------REYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++  IY  FGF  I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIESEVTACIKMVYDIYSTFGFTNI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRP+ R+G+D +WD AE  +   L      S + +   +  GEGAFYGPK E+ L
Sbjct: 417 FVKLSTRPDNRIGADDMWDRAEAGLSAAL------SANGLEYQIQHGEGAFYGPKIEFAL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D +GR+WQCGT+Q+DF LPSR +A YV   + +  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 RDCLGREWQCGTVQLDFALPSRLDASYVTEDNSRHTPVMIHRAILGSIERFIGIITEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P+WL+PIQA+V  IT S  +Y Q++   L    L ++ D RNE + +K+REH+++++
Sbjct: 531 GFFPVWLAPIQAVVMNITDSQADYVQQVVKQLSDAGLRVKADLRNEKVGFKVREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++CGDKE +E  + +R
Sbjct: 591 PYMLVCGDKEITEGKVSVR 609


>gi|270158051|ref|ZP_06186708.1| threonyl-tRNA synthetase [Legionella longbeachae D-4968]
 gi|269990076|gb|EEZ96330.1| threonyl-tRNA synthetase [Legionella longbeachae D-4968]
          Length = 639

 Score =  646 bits (1667), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 311/624 (49%), Positives = 432/624 (69%), Gaps = 18/624 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP +IKL  PDGS+K F    T  DVA SIS  LAK A+A  ++ ++ D S  +  + ++
Sbjct: 1   MP-NIKL--PDGSVKQFEAPLTVYDVAHSISPGLAKAALAGRVDNRLVDTSYLIENDSAL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            I+T +   SL +IRHS AH++A+AV+SI+P  QV IGP++EDGFYYDF  ++ F+ D+L
Sbjct: 58  VILTEKQEESLEIIRHSTAHLLAQAVKSIFPSAQVTIGPVVEDGFYYDFAFQRAFTPDDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IE KM E+   + P  ++ L  ++A + F+S  E YK +I+  IP  E ++LY+QG++
Sbjct: 118 ELIEAKMAELAKANYPVTRRELPRDEAIQYFKSIGEEYKAKIIADIPKDEVLSLYKQGDF 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV +TG +K F KL K+AGAYWRGDSN  ML RIYGTAW  ++ L  YL+ LE
Sbjct: 178 EDLCRGPHVPATGFLKAF-KLTKLAGAYWRGDSNNEMLQRIYGTAWADKKALADYLFRLE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+EKRDHRKL + ++LFH  +   G++FWH KGW I+Q L  YMR ++ D  Y+EI TPQ
Sbjct: 237 EAEKRDHRKLGKSLELFHFQDIAPGMVFWHPKGWTIYQELERYMRHRLADFGYQEIRTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D+ LW++SGHW ++R  MF  +  +      R +A+KPMNCP HV VFN GLKSYR+L
Sbjct: 297 LVDRVLWEKSGHWANFRDEMFVTETEN------RHYAVKPMNCPCHVQVFNQGLKSYRDL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R +EFG+ +R EPSGSLHGLMRVR   QDDAH+FCT++Q+ +E   +  L+ S+Y DF
Sbjct: 351 PLRFSEFGNCHRCEPSGSLHGLMRVRNMVQDDAHIFCTEDQIQSEVAMMLELVQSVYTDF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF +I  +L+ RPEKRVGSD +WD AE  +K     +K  + + ++     GEGAFYGPK
Sbjct: 411 GFNEIKYRLALRPEKRVGSDEVWDKAEAALK---QAMKERNIEWVDAP---GEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E  L D +GR WQCGTIQVDF++P R +A Y+     K  PVM+HRA+ GS ERF+GI+
Sbjct: 465 IECSLSDCLGRIWQCGTIQVDFSMPGRLDAIYIAEDGSKQTPVMLHRAILGSFERFMGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE++ G LPLWLSP+QAI+ TI+    EYA+++  +L+ + +    D RNE I +KIREH
Sbjct: 525 IEHYAGKLPLWLSPVQAIIMTISEKQSEYAEKVTQILQKNGIRANFDLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIR 622
           +++KIP +++ GDKE     + +R
Sbjct: 585 TLQKIPYLLVIGDKEVESGQVAVR 608


>gi|120611523|ref|YP_971201.1| threonyl-tRNA synthetase [Acidovorax citrulli AAC00-1]
 gi|166223312|sp|A1TR39|SYT_ACIAC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|120589987|gb|ABM33427.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Acidovorax
           citrulli AAC00-1]
          Length = 639

 Score =  646 bits (1666), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 297/615 (48%), Positives = 428/615 (69%), Gaps = 19/615 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I++T PD S + +    + +DVA+SI   LAK  VA  ++G++ D SD +  +  ++IIT
Sbjct: 2   IRITLPDNSQREYAGPVSVADVAQSIGPGLAKMTVAGKVDGRLVDASDVIDHDARLQIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ ++LA IE
Sbjct: 62  PWDQEGVEIIRHSCAHLVGHAVKQLYPTAKMVIGPVIEEGFYYDIAYERPFTPEDLAAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           ++M+E+IA+D   +K+    ++  ++F  + E YK+ ++E +P ++ + LY   E+ D+C
Sbjct: 122 QRMKELIAQDYDVVKKMTPRDEVIQVFRERGEEYKLRLVEDMPDEKAMGLYYHQEYVDMC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +T +  K FKL +V+GAYWRGD+    L RIYGTAW  +++L  Y+  +EE+EK
Sbjct: 182 RGPHVPNT-RFLKVFKLTRVSGAYWRGDARNEQLQRIYGTAWADKKDLEAYVKRIEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQ 302
           RDHR+L RE+DLFHI E   G +FWH KGW I+Q +  YMR+  +D+ Y+E+  PQ+LD+
Sbjct: 241 RDHRRLGRELDLFHIDEHSPGTVFWHPKGWTIWQGVEQYMRQVYRDNGYQEVKGPQILDK 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
           HLW+++GHWD YR NMF       T  +   +ALKPMNCPGH+ +FN G+KSYR+LP+R 
Sbjct: 301 HLWEKTGHWDKYRENMFT------TESEKHDYALKPMNCPGHILIFNQGVKSYRDLPLRY 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG  +RNEP+G LHG+MRVR FTQDD H+FCT++Q+  EC+    L+  +YKDFGF  
Sbjct: 355 GEFGQCHRNEPTGGLHGIMRVRAFTQDDGHIFCTEDQIQQECINFTALLQKVYKDFGFTD 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+ K++TRPEKR+GS+  WD AEN +   ++++K S  D     + +G+GAFYGPK EY 
Sbjct: 415 IIYKVATRPEKRIGSEESWDKAENAL---IESLKASGCD---YQIAVGDGAFYGPKLEYT 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+DAIGR WQCGTIQVD ++P R  A YV    ++  P+++HRA+ GS+ERFIGI+IE  
Sbjct: 469 LRDAIGRHWQCGTIQVDPSMPERLGAEYVGEDGQRHRPIVLHRAIVGSLERFIGILIEQH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIA----NLLKSHHLSIETDFRNETINYKIREH 598
            G LP+WL+P+Q  V  IT +  +Y +EIA      L +  L +E D RNE I YKIREH
Sbjct: 529 AGALPVWLAPVQVAVLNITGAQDDYCREIAAKLQKALPNQGLRVELDLRNEKITYKIREH 588

Query: 599 SIKKIPIIIICGDKE 613
           S++K+P I++ GDKE
Sbjct: 589 SLQKLPYILVVGDKE 603


>gi|152978995|ref|YP_001344624.1| threonyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
 gi|171704313|sp|A6VNZ2|SYT_ACTSZ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|150840718|gb|ABR74689.1| threonyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
          Length = 643

 Score =  646 bits (1666), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 301/641 (46%), Positives = 439/641 (68%), Gaps = 16/641 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPE 65
           +T PDGS + F    +  +VA+SI   LAK  +A  +NG+  D  D + + S +EIIT +
Sbjct: 4   ITLPDGSQRQFDNPVSVLEVAQSIGSGLAKATIAGRVNGERRDACDMINDDSTLEIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ ++P+V++AIGP IE+GFYYD D ++  + ++L  +EK+
Sbjct: 64  DEDGLEIIRHSCAHLLGHAIKQLFPDVKMAIGPTIENGFYYDVDLDRSLTQEDLDTLEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +KQ ++ ++AR+ FE + E YK+ IL E+I   ++  LY   E+ D+CR
Sbjct: 124 MSELAKTNYDVVKQRVTWQEARDTFEKRGEPYKMAILDENIAKDDHPALYHHQEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKLMKVAGAYWRGDS   ML RIYGTAW  +++L  YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLMKVAGAYWRGDSKNKMLQRIYGTAWADKKQLNGYLTRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ + +DL+H+ E+  G++FWH  GW +F+ L +++R K+K+ DY+E+  P ++D+ 
Sbjct: 243 DHRKIGKALDLYHMQEEAPGMVFWHNDGWTVFRELETFVRTKLKEYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW +Y   MF  +  +      R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWQNYGDLMFTTQSEN------REYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+ +E      ++  IY  FGF  I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQIESEVTSCIRMVYDIYGTFGFTDI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPEKR+G+D +WD AE   +G+ + +K+++   +   +  GEGAFYGPK E+ L
Sbjct: 417 AVKLSTRPEKRIGADEMWDRAE---QGLANALKHNA---LEYEIQEGEGAFYGPKIEFAL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D + R+WQCGTIQ+DF LP R NA YV   +++  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 RDCLDREWQCGTIQLDFALPGRLNASYVAEDNDRRTPVMIHRAILGSIERFIGIITEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+QA+V  IT S  EY Q++   L    L ++ D RNE + +K+REH+++++
Sbjct: 531 GFFPAWLAPVQAVVMNITDSQAEYVQKVVKQLSDAGLRVKADLRNEKVGFKVREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P +++CGDKE +E  + +R    T      + D I IL ++
Sbjct: 591 PYMLVCGDKEIAEGKVSVRTRRGTDLGTYDVEDFIEILKQQ 631


>gi|289163681|ref|YP_003453819.1| Threonyl tRNA synthetase [Legionella longbeachae NSW150]
 gi|288856854|emb|CBJ10665.1| Threonyl tRNA synthetase [Legionella longbeachae NSW150]
          Length = 639

 Score =  645 bits (1665), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 311/624 (49%), Positives = 432/624 (69%), Gaps = 18/624 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP +IKL  PDGS+K F    T  DVA SIS  LAK A+A  ++ ++ D S  +  + ++
Sbjct: 1   MP-NIKL--PDGSVKQFEAPLTVYDVAHSISPGLAKAALAGRVDNRLVDTSYLIENDSAL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            I+T +   SL +IRHS AH++A+AV+SI+P  QV IGP++EDGFYYDF  ++ F+ D+L
Sbjct: 58  VILTEKQEESLEIIRHSTAHLLAQAVKSIFPSAQVTIGPVVEDGFYYDFAFQRAFTPDDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IE KM E+   + P  ++ L  ++A + F+S  E YK +I+  IP  E ++LY+QG++
Sbjct: 118 ELIEAKMAELAKANYPVTRRELPRDEAIQYFKSIGEEYKAKIIADIPKDEVLSLYKQGDF 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV +TG +K F KL K+AGAYWRGDSN  ML RIYGTAW  ++ L  YL+ LE
Sbjct: 178 EDLCRGPHVPATGFLKAF-KLTKLAGAYWRGDSNNEMLQRIYGTAWADKKALADYLFRLE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+EKRDHRKL + ++LFH  +   G++FWH KGW I+Q L  YMR ++ D  Y+EI TPQ
Sbjct: 237 EAEKRDHRKLGKSLELFHFQDIAPGMVFWHPKGWTIYQELERYMRHRLADFGYQEIRTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D+ LW++SGHW ++R  MF  +  +      R +A+KPMNCP HV VFN GLKSYR+L
Sbjct: 297 LVDRVLWEKSGHWANFRDEMFVTETEN------RHYAVKPMNCPCHVQVFNQGLKSYRDL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R +EFG+ +R EPSGSLHGLMRVR   QDDAH+FCT++Q+ +E   +  L+ S+Y DF
Sbjct: 351 PLRFSEFGNCHRCEPSGSLHGLMRVRNMVQDDAHIFCTEDQIQSEVAMMLELVQSVYTDF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF +I  +L+ RPEKRVGSD +WD AE  +K     +K  + + ++     GEGAFYGPK
Sbjct: 411 GFNEIKYRLALRPEKRVGSDEVWDKAEAALK---QAMKERNIEWVDAP---GEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E  L D +GR WQCGTIQVDF++P R +A Y+     K  PVM+HRA+ GS ERF+GI+
Sbjct: 465 IECSLSDCLGRIWQCGTIQVDFSMPGRLDAIYIAEDGSKQTPVMLHRAILGSFERFMGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE++ G LPLWLSP+QAI+ TI+    EYA+++  +L+ + +    D RNE I +KIREH
Sbjct: 525 IEHYAGKLPLWLSPVQAIIMTISEKQSEYAEKVTQILQKNGIRANFDLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIR 622
           +++KIP +++ GDKE     + +R
Sbjct: 585 TLQKIPYLLVIGDKEVESGQVAVR 608


>gi|319786721|ref|YP_004146196.1| threonyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1]
 gi|317465233|gb|ADV26965.1| threonyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1]
          Length = 634

 Score =  645 bits (1665), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 295/635 (46%), Positives = 430/635 (67%), Gaps = 16/635 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I +T PDGS + F    T   VA+SI   LAK  VA  ++G++ D  D +  + ++ IIT
Sbjct: 2   ITITLPDGSQRQFEGPVTVLQVAQSIGAGLAKATVAGQVDGRLVDACDVIDHDATLRIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+D   + +IRHSCAH++  AV+ ++PEV++ IGP+I +GFYYD   E+PF+ D++A IE
Sbjct: 62  PKDEEGVEIIRHSCAHLVGHAVKQLYPEVKMVIGPVIAEGFYYDIYSERPFTPDDMAAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESI-PAKENVTLYRQGEWFDL 182
           ++M+E+IA+D   +K+    E+   +F+++ E YK+ ++E + P    + LY   E+ D+
Sbjct: 122 QRMRELIAQDYDVVKKMTPREEVINVFKARGEDYKLRLIEDMGPEVTAMGLYYHQEYVDM 181

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +T +  K FKL +++GAYWRGD+    L RIYGTAW  +++L  Y+  +EE+E
Sbjct: 182 CRGPHVPNT-RFLKAFKLTRISGAYWRGDAKNEQLQRIYGTAWADEKQLKAYIQRIEEAE 240

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHR++ ++ DLFH+ E+  G++FWH KGW ++Q +  YMRR  ++  Y E+  PQ+LD
Sbjct: 241 KRDHRRIGKQQDLFHLQEEAPGLVFWHPKGWSVWQVVEQYMRRVYRETGYGEVRCPQILD 300

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             LW++SGHWD+Y+ NMF       T  + RT+A+KPMNCPGHV +FN GL SYR+LP+R
Sbjct: 301 VSLWKKSGHWDNYQDNMFF------TESEKRTYAVKPMNCPGHVQIFNQGLHSYRDLPIR 354

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
             EFGS +RNEPSG+LHG++RVRGFTQDD HVFCT++Q+ +E    H   + +Y DFGFE
Sbjct: 355 YGEFGSCHRNEPSGALHGILRVRGFTQDDGHVFCTEQQIESEVRAFHAQALKVYTDFGFE 414

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            I +K++ RP+ R+G DA WD AE+ ++  L       Q+      L GEGAFYGPK EY
Sbjct: 415 DIQIKIALRPDNRLGDDATWDKAEDALRSALRASGVEWQE------LPGEGAFYGPKIEY 468

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            LKDAIGR WQ GT+QVDF +P R  A YV+ +S++ HPVM+HRA+ GS+ERFIGI+IE+
Sbjct: 469 HLKDAIGRTWQLGTMQVDFMMPGRLGAEYVDENSQRRHPVMLHRAIVGSMERFIGILIEH 528

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G  P WL+P+QA+V  IT    EY  E+  +L +    +E D RNE I +KIREH+++
Sbjct: 529 HAGQFPAWLAPVQAVVMNITDVQAEYVNEVRKVLANQGFRVEADLRNEKIGFKIREHTLQ 588

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
           ++P +++ GD+E    ++ +R         +S+ D
Sbjct: 589 RVPYLLVVGDREKENGAVAVRTRSGEDLGTMSVSD 623


>gi|329895719|ref|ZP_08271123.1| Threonyl-tRNA synthetase [gamma proteobacterium IMCC3088]
 gi|328922195|gb|EGG29550.1| Threonyl-tRNA synthetase [gamma proteobacterium IMCC3088]
          Length = 641

 Score =  645 bits (1664), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 313/632 (49%), Positives = 422/632 (66%), Gaps = 15/632 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDG+ K F    +  DVA +I   LAK A+A  ++GK  D S  +  + S+ IIT  
Sbjct: 4   ITLPDGNQKTFDAPPSVYDVALAIGPGLAKAALAGVVDGKEVDTSFVIENDASLAIITDR 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   + +IRHS AH++A AVQ ++P  QV IGP IEDGFYYDF     F++++L +IE +
Sbjct: 64  DDAGIEIIRHSTAHLLAMAVQELYPGTQVTIGPTIEDGFYYDFATGHRFTTEDLEKIEVR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M EI  RD    +  +S E A E F +  E YKV+I+E +PA E +++Y+QG W DLCRG
Sbjct: 124 MAEIADRDLTVERLEVSREHAIEEFRNMGENYKVQIIEDLPAGEIISVYKQGPWMDLCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV STG+++ F KL KVAGAYWRGDS   ML R+YGTAW  +++L QYL  + E+EKRD
Sbjct: 184 PHVPSTGKLQAF-KLTKVAGAYWRGDSKNEMLQRVYGTAWANKKQLKQYLNRIAEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHL 304
           HR++ +++DLFH  E+  G++FWH KGW ++Q +  YMR R+ ++ Y+EI TPQV+D  L
Sbjct: 243 HRRIGKQLDLFHTQEEAPGMVFWHPKGWTVYQVIEQYMRNRQRQEGYKEIKTPQVVDMTL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W +SGH D +  +MF +K  D      R FA+KPMNCP HV VFN GLKSYR+LP+RLAE
Sbjct: 303 WHKSGHADKFGDDMFMLKAED------REFAVKPMNCPCHVQVFNQGLKSYRDLPLRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNEPSGSLHG+MRVRGFTQDDAH+FCT++Q+  E  +  + +  +Y+DFGF +++
Sbjct: 357 FGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTEDQIQPEVSRFIDFLHGVYEDFGFNEVI 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
            +LSTRPEKRVGS+  WD AE  +   LD         +   +L GEGAFYGPK E+ LK
Sbjct: 417 YRLSTRPEKRVGSEEDWDRAEKALADALDA------HNLPWELLPGEGAFYGPKIEFSLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D IGR WQ GTIQVDF++P R +A YV     +  PVM+HRA+ GS ERFIGI+IE+F+G
Sbjct: 471 DCIGRVWQLGTIQVDFSMPGRLDAQYVAEDGARKTPVMLHRAILGSFERFIGILIEHFEG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P WL+P Q  V  IT    E+ Q + + L +       D RNE I +KIRE ++ KIP
Sbjct: 531 RFPTWLAPEQVAVMNITDKQGEFTQNVVDYLNNSGFRAIADLRNEKIGFKIRERTLAKIP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
            +++ GDKE   +S+ +R         ++L D
Sbjct: 591 YLLVVGDKEVETQSVAVRTRDGKDLGTMTLAD 622


>gi|114776996|ref|ZP_01452016.1| threonyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1]
 gi|114552517|gb|EAU54977.1| threonyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1]
          Length = 634

 Score =  645 bits (1664), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 302/636 (47%), Positives = 424/636 (66%), Gaps = 15/636 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           + ++ PDGS +     AT  D+A  I   LA+  +A  +NGK  D+S  + +G ++ +IT
Sbjct: 1   MNISLPDGSSRTLNEGATAYDLAADIGAGLARATIAATVNGKQVDVSHQLHDGDTVSLIT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +    L VIRHS +H+MA AVQ ++P  QV IGP+IEDGFYYDF  E+ F+ D+L +IE
Sbjct: 61  EKSDEGLEVIRHSTSHLMAMAVQEVFPGAQVTIGPVIEDGFYYDFAYERAFTPDDLTKIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           +KM+++  +  P  ++    + A   FE   E YK +++  IPA E V+LY+QGEW DLC
Sbjct: 121 EKMRQLSNQKLPITREEWDRDAAIAHFEGIGEIYKAKLIGRIPAGETVSLYKQGEWSDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +TG V K FKLMKV+GAYW G+S+   L RIYGTAW ++ +L  YL  LEE+EK
Sbjct: 181 RGPHVPNTG-VLKHFKLMKVSGAYWEGNSDNEQLCRIYGTAWASKGDLKAYLTRLEEAEK 239

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQ 302
           RDHRKLA+ +DLFH+ E+  G+IFWH KGW ++Q + + +R  ++D+ Y+EI TPQ++D+
Sbjct: 240 RDHRKLAKSLDLFHLQEEAPGMIFWHPKGWSVWQQVENEIRGVMRDNGYQEIKTPQMVDR 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD +R  MF       T  + R +A+KPMNCP H+ VFN  L SYR+LP+RL
Sbjct: 300 KLWEKSGHWDKFREEMFT------TSTENRDYAIKPMNCPCHIQVFNQNLHSYRDLPLRL 353

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHGLMR+R F QDDAH+FCT+ Q+ +E     +L   +YK FGF+ 
Sbjct: 354 AEFGSCHRNEPSGTLHGLMRLRNFVQDDAHIFCTEAQIQDEVCNFIDLTYDVYKRFGFDD 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           +++ LS RPEKRVG+D  WD AE  +   LD+        I  G+  GEGAFYGPK E+ 
Sbjct: 414 VIIFLSDRPEKRVGTDEQWDKAEAALHQALDS------KGIEYGLNPGEGAFYGPKIEFS 467

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LKD +GR WQCGTIQVDF++P + +A YV   S +  PVM+HRA+ GS+ERFIGI+IE++
Sbjct: 468 LKDCLGRVWQCGTIQVDFSMPGKLDAEYVAEDSSRQTPVMLHRAILGSMERFIGILIEHY 527

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
           +G  P WL+P+Q +   IT +  +Y  E+   +       E D RNE + YK+R H++ +
Sbjct: 528 EGKFPFWLAPVQVVACNITDAQADYVAEVTKSMHKAGFRAEMDLRNEKVGYKVRAHTLAR 587

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           +P I++ GD+E  + +I +R          S+ D I
Sbjct: 588 VPYILVAGDREREDGTISVRDLSGQNLGTFSVDDWI 623


>gi|54295556|ref|YP_127971.1| threonyl tRNA synthetase [Legionella pneumophila str. Lens]
 gi|73919803|sp|Q5WT82|SYT_LEGPL RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|53755388|emb|CAH16884.1| Threonyl tRNA synthetase [Legionella pneumophila str. Lens]
          Length = 637

 Score =  645 bits (1664), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 314/624 (50%), Positives = 434/624 (69%), Gaps = 18/624 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SI 59
           MP ++KL  PDG++K+F    T  DVA  IS  LAK A+A  ++G + D S  ++E  S+
Sbjct: 1   MP-NVKL--PDGNVKHFEAPLTIYDVAHHISPGLAKAAIAGRVDGVLVDTSYLIKEDCSL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            I+T +   SL VIRHS AH++A+AV++++P  QV IGP+IEDGFYYDF  E+ F+ D+L
Sbjct: 58  IIVTEKHEDSLEVIRHSTAHLLAQAVKALFPSAQVTIGPVIEDGFYYDFAFERSFTPDDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           + IE KM E+   +    ++ L   +A + F+   E YK +I+  IP  E+++LYRQG++
Sbjct: 118 SLIEVKMHELAKANLSITRRELPRNEAIQYFKGLGEEYKAKIIADIPENESLSLYRQGDF 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV STG +K F KL KVAGAYWRGDSN  ML RIYGTAW  ++ L +YLY LE
Sbjct: 178 EDLCRGPHVPSTGFLKAF-KLTKVAGAYWRGDSNNEMLQRIYGTAWADKKSLEEYLYRLE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+EKRDHRKL + +DLFH  +   G++FWH KGW I+Q L  YMR ++ D  Y+EI TPQ
Sbjct: 237 EAEKRDHRKLGKALDLFHFQDIAPGMVFWHPKGWTIYQELEHYMRNRLVDFGYQEIRTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D+ LW++SGHW ++R  MF  +  +      R +A+KPM+CP HV ++NHGLKSYR+L
Sbjct: 297 LVDRSLWEKSGHWANFRDEMFVTETEN------RHYAVKPMSCPCHVQIYNHGLKSYRDL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RL+EFG+ +R EPSG+LHGLMRVR   QDDAH+FCT++Q+ +E   +  L+ S+YKDF
Sbjct: 351 PLRLSEFGNCHRCEPSGALHGLMRVRNMVQDDAHIFCTEDQIQSEVAMMLELVQSVYKDF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF +I  +L+ RPEKRVGSD +WD AE  +K  +   +  + + ++     GEGAFYGPK
Sbjct: 411 GFTEIKYRLALRPEKRVGSDDVWDKAETALKLAM---QGRNIEWVDAP---GEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E  L D +GR WQCGTIQVDF++P+R  A YV     K  PVM+HRA+ GS ERF+GI+
Sbjct: 465 IECSLSDCLGRIWQCGTIQVDFSMPARLEASYVAEDGSKQTPVMLHRAILGSFERFMGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE++ G LPLWLSP+QA+V TI+    EYA+++   L+   +    D RNE I +KIREH
Sbjct: 525 IEHYAGKLPLWLSPVQAVVLTISEKQNEYAEKVRKTLQKRGVRANFDLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIR 622
           +++KIP +++ GDKE     + +R
Sbjct: 585 TLQKIPYLLVVGDKEVENCQVAVR 608


>gi|254429307|ref|ZP_05043014.1| threonyl-tRNA synthetase [Alcanivorax sp. DG881]
 gi|196195476|gb|EDX90435.1| threonyl-tRNA synthetase [Alcanivorax sp. DG881]
          Length = 638

 Score =  645 bits (1663), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 308/632 (48%), Positives = 428/632 (67%), Gaps = 13/632 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           +    PDG+   F   A+  ++A  IS+ LAK+A+A   N  + D+  P+ +G ++EIIT
Sbjct: 3   VSYQLPDGASMEFEQPASAFEIAGRISKKLAKQALAAKANDNLIDVYLPIDDGATVEIIT 62

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            E   +L +IRH  AH+MAEAVQ ++P+ QV IGP I +GFYYDF ++ PF+ D+L  IE
Sbjct: 63  RETDEALELIRHDAAHVMAEAVQELFPDTQVTIGPTITNGFYYDFHRDTPFTPDDLKTIE 122

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+MQ+I+ R+    ++    ++A   F  K E +K EI+  +PA + V+LYRQGE+ DLC
Sbjct: 123 KRMQDIVRRNEEIRREVWDRDEAVAFFLEKGEEFKAEIIRELPADQEVSLYRQGEFIDLC 182

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ ST ++   FKLMKVAGAYWRGD+N   L RIYGTAW  ++EL  +L  +EE+EK
Sbjct: 183 RGPHLPSTSKLGDGFKLMKVAGAYWRGDANNAQLQRIYGTAWRDKKELNAHLKQIEEAEK 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQ 302
           RDHRKLAREM LFHI ++  G +FWH KGW++ Q L +Y+R K+ K  Y+E++TPQ++D+
Sbjct: 243 RDHRKLAREMGLFHIQQEAVGSMFWHPKGWRMRQNLENYIRGKMEKGGYQEVSTPQMMDR 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+QSGHWD Y  +MF V C  D     +  A+KPMNCPGHV +F  G+ SYR+LP+RL
Sbjct: 303 ILWEQSGHWDKYGEDMFTV-CTHDH----KEMAVKPMNCPGHVQIFKQGITSYRDLPIRL 357

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EF +++RNE  G+LHGLMR R F+QDDAH+FCT+EQ+  E      ++  +Y+DFGF+ 
Sbjct: 358 GEFTTLFRNEAHGALHGLMRARSFSQDDAHIFCTEEQINEETAGFIKMLREVYEDFGFDS 417

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             +K S RP+ R GSD  WD AE  ++  ++++       +   +  GEGAFYGPK E++
Sbjct: 418 FRIKFSDRPDNRAGSDETWDKAEGALRSAVESLG------LECELNPGEGAFYGPKLEFV 471

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+DAIGRDWQCGT+QVDF LP R +A YV     +  PVM+HRAV GS+ERF+GI+IE+ 
Sbjct: 472 LRDAIGRDWQCGTLQVDFVLPDRLDAEYVAEDGSRQRPVMLHRAVLGSLERFLGILIEST 531

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G+LPLWL+P    + TIT+SA EYA  +   L +  +  E D RNE I +K+REHS  K
Sbjct: 532 AGHLPLWLAPRPVAICTITNSADEYATAVQQKLVAAGVPAELDIRNEKIGFKVREHSRAK 591

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
            P I + G++EA +  + IR  GS  T+ + L
Sbjct: 592 TPRIWVIGEQEAQQNQVAIRTLGSQATETMDL 623


>gi|148358548|ref|YP_001249755.1| threonyl tRNA synthase [Legionella pneumophila str. Corby]
 gi|296108363|ref|YP_003620064.1| threonyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
 gi|166223351|sp|A5IAK9|SYT_LEGPC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|148280321|gb|ABQ54409.1| threonyl tRNA synthase [Legionella pneumophila str. Corby]
 gi|295650265|gb|ADG26112.1| threonyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
          Length = 637

 Score =  644 bits (1662), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 313/624 (50%), Positives = 434/624 (69%), Gaps = 18/624 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SI 59
           MP ++KL  PDG++K+F    T  DVA  IS  LAK A+A  ++G + D S  ++E  S+
Sbjct: 1   MP-NVKL--PDGNVKHFEAPLTIYDVAHHISPGLAKAAIAGRVDGVLVDTSYLIKEDCSL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            I+T +   SL +IRHS AH++A+AV++++P  QV IGP+IEDGFYYDF  E+ F+ D+L
Sbjct: 58  IIVTEKHEDSLEIIRHSTAHLLAQAVKALFPSAQVTIGPVIEDGFYYDFAFERSFTPDDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           + IE KM E+   +    ++ L   +A + F+S  E YK +I+  IP  E ++LYRQG++
Sbjct: 118 SLIEAKMHELAKANLSITRRELPRNEAIQYFKSLGEEYKAKIIADIPENEALSLYRQGDF 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV STG +K F KL KVAGAYWRGDSN  ML RIYGTAW  ++ L +YL+ LE
Sbjct: 178 EDLCRGPHVPSTGFLKAF-KLTKVAGAYWRGDSNNEMLQRIYGTAWADKKSLEEYLFRLE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+EKRDHRKL + +DLFH  +   G++FWH KGW I+Q L  YMR ++ D  Y+EI TPQ
Sbjct: 237 EAEKRDHRKLGKALDLFHFQDIAPGMVFWHPKGWTIYQELEHYMRNRLVDFGYQEIRTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D+ LW++SGHW ++R  MF  +  +      R +A+KPM+CP HV ++NHGLKSYR+L
Sbjct: 297 LVDRSLWEKSGHWANFRDEMFVTETEN------RHYAVKPMSCPCHVQIYNHGLKSYRDL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RL+EFG+ +R EPSG+LHGLMRVR   QDDAH+FCT++Q+ +E   +  L+ S+YKDF
Sbjct: 351 PLRLSEFGNCHRCEPSGALHGLMRVRNMVQDDAHIFCTEDQIQSEVAMMLELVQSVYKDF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF +I  +L+ RPEKRVGSD +WD AE  +K  +   +  + + ++     GEGAFYGPK
Sbjct: 411 GFTEIKYRLALRPEKRVGSDDVWDKAETALKLAM---QGRNIEWVDAP---GEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E  L D +GR WQCGTIQVDF++P+R  A YV     K  PVM+HRA+ GS ERF+GI+
Sbjct: 465 IECSLSDCLGRIWQCGTIQVDFSMPARLEASYVAEDGSKQTPVMLHRAILGSFERFMGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE++ G LPLWLSP+QA+V TI+    EYA+++   L+   +    D RNE I +KIREH
Sbjct: 525 IEHYAGKLPLWLSPVQAVVLTISEKQNEYAEKVRKTLQKRGIRANFDLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIR 622
           +++KIP +++ GDKE     + +R
Sbjct: 585 TLQKIPYLLVVGDKEVENCQVAVR 608


>gi|85709956|ref|ZP_01041021.1| threonyl-tRNA synthetase [Erythrobacter sp. NAP1]
 gi|85688666|gb|EAQ28670.1| threonyl-tRNA synthetase [Erythrobacter sp. NAP1]
          Length = 671

 Score =  644 bits (1662), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 318/671 (47%), Positives = 436/671 (64%), Gaps = 29/671 (4%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIE---I 61
           +K++ PDGS++     +T +DVA +I   LAK A+A  ++G+V DL+ P  EG  E   I
Sbjct: 5   LKISLPDGSVREMEAGSTPADVAAAIGPGLAKAALAARVDGEVRDLNRPF-EGDAELALI 63

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF---DKEQPFSSDE 118
            + ++  +L + RH  AH++AEAVQ+++P  Q+  GP  +DGFYYD       +PFS D+
Sbjct: 64  TSKDEEEALELARHDYAHVLAEAVQALYPGTQITFGPATDDGFYYDVMAPASREPFSMDD 123

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L  IE+KM+EII  D P  ++  S ++  + +ES+ E++K E  + +P  E +T+Y  G+
Sbjct: 124 LPAIEEKMREIIKADKPLRREVWSRQQLIDKWESEGESFKAEWAKELPENEELTVYWSGD 183

Query: 179 -WFDLCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
            W D+CRGPH+ STG++  + FKLM+VAGAYWRGD     L+RIYGT W  +++L  +L+
Sbjct: 184 DWLDMCRGPHLASTGKLDPQAFKLMRVAGAYWRGDQRNAQLTRIYGTGWLNKKQLNAHLH 243

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEIN 295
            LEE+ KRDHRKL REMDLFH+ E+  G +FWH KG++I++ L +YMRRK+    Y EI 
Sbjct: 244 RLEEAAKRDHRKLGREMDLFHLQEEAHGSVFWHPKGYRIWRELEAYMRRKMDGGGYREIK 303

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAV-------------KCADDTIKDLRTFALKPMNCP 342
           TPQ++D   W QSGHW  Y  NMFAV             + +     D    A+KPMNCP
Sbjct: 304 TPQLMDVRQWTQSGHWGKYAENMFAVPDIVPDVDDSGEAEASPKVADDADWMAIKPMNCP 363

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN 402
            HV VF  G+ SYR+LP+RL E G  +RNEP G+LHGLMRVR FTQDDAH+FCT++Q+  
Sbjct: 364 AHVLVFKQGITSYRDLPIRLGEMGCCHRNEPHGALHGLMRVRQFTQDDAHIFCTEDQVVE 423

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
           E  K   L  S+Y+DFGF    VKL+ RPEKR GS+  WD AE  ++   D +  +  D 
Sbjct: 424 EVRKFCALADSVYRDFGF-SYHVKLALRPEKRFGSEEDWDKAEQELR---DAVAEAGMDN 479

Query: 463 INTG--VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHP 520
              G   L GEGAFY PK E+ L DAIGR WQ GTIQ D  LP R +A YV    EK  P
Sbjct: 480 EEYGWEELPGEGAFYAPKLEWHLTDAIGRTWQVGTIQGDRVLPDRLDATYVGEDGEKHRP 539

Query: 521 VMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHL 580
           VM+HRA+FGS ERFIGI+IE+F G LP WL+P+QA+V TI S A +YA E    L++  +
Sbjct: 540 VMLHRAIFGSYERFIGILIEHFAGRLPSWLAPVQAVVATIVSDADDYANEATAKLQAAGI 599

Query: 581 SIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
            +E+D RNE INYK+REHS+ K+P +++ G +EA E ++ +R  G    + +SL +AI +
Sbjct: 600 RVESDLRNEKINYKVREHSLAKVPHLLVVGKREAEEGTVAVRTLGEKEQRVMSLDEAIAM 659

Query: 641 LTKESLPPDCQ 651
           L   + PPD +
Sbjct: 660 LRDAATPPDLR 670


>gi|56460507|ref|YP_155788.1| threonyl-tRNA synthetase [Idiomarina loihiensis L2TR]
 gi|73919798|sp|Q5QYN4|SYT_IDILO RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|56179517|gb|AAV82239.1| Threonyl-tRNA synthetase [Idiomarina loihiensis L2TR]
          Length = 638

 Score =  644 bits (1661), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 306/635 (48%), Positives = 426/635 (67%), Gaps = 16/635 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  +VA  I   LAK  VA  I+G++ D  + +  +  IEI+TP+
Sbjct: 4   ITLPDGSQREFDKPVSIMEVAADIGAGLAKATVAGRIDGELVDACELIEHDARIEIVTPK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   + +IRHSCAH+M  AV+ +WP+ ++AIGP+I++GFYYD D +  F+ ++L +IEK+
Sbjct: 64  DDDGVHIIRHSCAHLMGHAVKQMWPDAKMAIGPVIDNGFYYDIDVDHTFTQEDLEKIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M+E+   +   +K+  S ++ARE F  + E YK+EIL E IP      LY   E+ D+CR
Sbjct: 124 MKELAKTEYAVVKKKASWKEARETFVERHEPYKIEILDEDIPTDATPGLYHHEEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +  + FK+MK+AGAYWRGDS+  ML RIYGTAW  +++L  YL  LEE+EKR
Sbjct: 184 GPHVPNM-KFCQHFKIMKMAGAYWRGDSDNKMLQRIYGTAWADKKQLKAYLQRLEEAEKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+A+  DLFH  E+  G++FWH  GW IF+ L +Y+R K+++ +Y+E+  P ++D+ 
Sbjct: 243 DHRKIAKAQDLFHWQEEAPGMVFWHHNGWTIFRELETYIREKMREYEYQEVKGPMMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SGHW+ +   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKSGHWEKFSELMFT------TSSENREYAVKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT++Q+  E      ++   YK FGFE I
Sbjct: 357 EFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEQQVQEEVAGCIKMVYETYKTFGFENI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPEKR+G DA WD +E  +   L   KN+    I+   L GEGAFYGPK E+ L
Sbjct: 417 DVKLSTRPEKRLGDDATWDRSETALAQAL---KNND---IDFSYLPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D +GR WQCGTIQ+DF LP R  A YV   +E+  PVMIHRA+ GS+ERF+GI+IE + 
Sbjct: 471 FDCLGRAWQCGTIQLDFALPGRLGATYVGEDNERHTPVMIHRAILGSLERFMGILIEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G+ PLWLSP Q ++  IT +  +Y +++   L    +    D RNE I +KIREH++K++
Sbjct: 531 GHFPLWLSPTQVVLMNITDNQSDYVRKVVKTLNEKGIRASADLRNEKIGFKIREHTLKRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           P +++ GDKE     + +R  G     K  L D I
Sbjct: 591 PYLLVVGDKEVEAGEVAVRTRGGEDLGKFPLEDFI 625


>gi|307611592|emb|CBX01274.1| threonyl tRNA synthetase [Legionella pneumophila 130b]
          Length = 637

 Score =  644 bits (1660), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 312/624 (50%), Positives = 434/624 (69%), Gaps = 18/624 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SI 59
           MP ++KL  PDG++K+F    T  DVA  IS  LAK A+A  ++G + D S  ++E  S+
Sbjct: 1   MP-NVKL--PDGNVKHFEAPLTIYDVAHHISPGLAKAAIAGRVDGVLVDTSYLIKEDCSL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            I+T +   SL +IRHS AH++A+AV++++P  QV IGP+IEDGFYYDF  E+ F+ D+L
Sbjct: 58  IIVTEKHEDSLEIIRHSTAHLLAQAVKALFPSAQVTIGPVIEDGFYYDFAFERSFTPDDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           + IE KM E+   +    ++ L   +A + F+   E YK +I+  IP  E+++LYRQG++
Sbjct: 118 SLIEAKMHELAKANLSITRRELPRNEAIQYFKGLGEEYKAKIIADIPENESLSLYRQGDF 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV STG +K F KL KVAGAYWRGDSN  ML RIYGTAW  ++ L +YL+ LE
Sbjct: 178 EDLCRGPHVPSTGFLKAF-KLTKVAGAYWRGDSNNEMLQRIYGTAWADKKSLEEYLFRLE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+EKRDHRKL + +DLFH  +   G++FWH KGW I+Q L  YMR ++ D  Y+EI TPQ
Sbjct: 237 EAEKRDHRKLGKALDLFHFQDIAPGMVFWHPKGWTIYQELEHYMRNRLVDFGYQEIRTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D+ LW++SGHW ++R  MF  +  +      R +A+KPM+CP HV ++NHGLKSYR+L
Sbjct: 297 LVDRSLWEKSGHWANFRDEMFVTETEN------RHYAVKPMSCPCHVQIYNHGLKSYRDL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RL+EFG+ +R EPSG+LHGLMRVR   QDDAH+FCT++Q+ +E   +  L+ S+YKDF
Sbjct: 351 PLRLSEFGNCHRCEPSGALHGLMRVRNMVQDDAHIFCTEDQIQSEVAMMLELVQSVYKDF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF +I  +L+ RPEKRVGSD +WD AE  +K  +   +  + + ++     GEGAFYGPK
Sbjct: 411 GFTEIKYRLALRPEKRVGSDDVWDKAETALKLAM---QGRNIEWVDAP---GEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E  L D +GR WQCGTIQVDF++P+R  A YV     K  PVM+HRA+ GS ERF+GI+
Sbjct: 465 IECSLSDCLGRIWQCGTIQVDFSMPARLEASYVAEDGSKQTPVMLHRAILGSFERFMGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE++ G LPLWLSP+QA+V TI+    EYA+++   L+   +    D RNE I +KIREH
Sbjct: 525 IEHYAGKLPLWLSPVQAVVLTISEKQNEYAEKVRKTLQKRGVRANFDLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIR 622
           +++KIP +++ GDKE     + +R
Sbjct: 585 TLQKIPYLLVVGDKEVENCQVAVR 608


>gi|73667547|ref|YP_303563.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Ehrlichia canis
           str. Jake]
 gi|123745825|sp|Q3YQP0|SYT_EHRCJ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|72394688|gb|AAZ68965.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Ehrlichia canis
           str. Jake]
          Length = 633

 Score =  644 bits (1660), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 312/639 (48%), Positives = 431/639 (67%), Gaps = 15/639 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           I + F +   K F     G DV   +   L  KA+AV +NG+  DLS  + E  + E+IT
Sbjct: 2   INIYFNNNLCKQFHRGIKGYDVVADLFPELKNKAIAVKVNGESYDLSREITENCTFEVIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
                 L +IRH  AHIMA+AV+ I+P+ Q+ IGP I+DGFYYDF  E  FSS++L  IE
Sbjct: 62  TNSEEGLEIIRHDTAHIMAQAVKEIFPDTQITIGPTIKDGFYYDFATEHNFSSNDLEIIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           KKM EII ++  F+++  + E+A + F S  E YKV+I+  IP  EN+T+Y+QG + DLC
Sbjct: 122 KKMIEIINKNESFIREVWTREEAIKFFSSIGEDYKVKIISKIPNNENITVYKQGNFIDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH  ST +  K FKL KV+G+YW+G+S+   L RIYGTAW  ++EL  YL  L E EK
Sbjct: 182 RGPHAPST-KTSKSFKLTKVSGSYWQGNSSNEKLQRIYGTAWRNEEELKSYLNNLIEIEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQ 302
           RDHRK+ +E++LFHI  +  G +FWH+KGW I++T+ +Y+R+K++ + Y E+ TP +L++
Sbjct: 241 RDHRKIGKELELFHIQNEACGQVFWHKKGWTIYRTIENYIRKKLETNGYIEVKTPMLLNK 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD +R NMF  +  D      +  A+KPMNCP H+ +FN  ++SYR+LP+R+
Sbjct: 301 ELWEKSGHWDKFRENMFLSEAED------KVLAIKPMNCPCHIQIFNSKIRSYRDLPIRM 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFG  +R E SG+LHGLMRVRGFTQDDAH+FCT+ Q+ +E LK  NL++ +YKDFGF  
Sbjct: 355 AEFGICHRYEASGALHGLMRVRGFTQDDAHIFCTESQVISEALKFCNLLMEVYKDFGFTN 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+VK S RPE R GSD  WD AE+ +K      K+     +N  +  G+GAFYGPK E++
Sbjct: 415 ILVKFSDRPENRAGSDETWDRAESALK------KSVEAANLNYVLNPGDGAFYGPKLEFV 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LKDAIGR+WQCGT+Q+DF LP R  A+YV S  +K HP+M+HRA+ G+ ERFIGI+IE+ 
Sbjct: 469 LKDAIGREWQCGTLQMDFVLPERLGAYYVGSDGKKHHPIMLHRAILGTFERFIGILIEHH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P+WL+P Q  + TI+  ++EYA  +    + H++ +E D  NE INYKIR H  KK
Sbjct: 529 SGKFPIWLAPTQLSILTISEESIEYANSLKTKAEEHNIRVELDATNEKINYKIRNHIHKK 588

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           IP+  I G KE +E S+ IR   S T Q + +  A+  L
Sbjct: 589 IPVFWIVGKKEVNENSVSIRYLESNTQQVMPIDKALKTL 627


>gi|169634342|ref|YP_001708078.1| threonyl-tRNA synthetase [Acinetobacter baumannii SDF]
 gi|238688108|sp|B0VKJ4|SYT_ACIBS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|169153134|emb|CAP02213.1| threonyl-tRNA synthetase [Acinetobacter baumannii]
          Length = 640

 Score =  644 bits (1660), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 308/642 (47%), Positives = 435/642 (67%), Gaps = 16/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPE 65
           +T P+G  K+F    +  +VA+SI   LAK  VA  +N ++ D  D + E S ++IITP+
Sbjct: 4   ITLPNGDQKSFDHPVSVMEVAQSIGPGLAKNTVAGRVNDRLVDACDLITEDSTLQIITPK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  AV+ ++PE ++ IGP+IE+GFYYD     PF+ D++A IE++
Sbjct: 64  DEEGLEIIRHSCAHLVGHAVKQLFPEAKMVIGPVIEEGFYYDIWMPCPFTLDDMAAIEER 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+++I +D   +K+    ++  ++F  + E YK+ ++E +P ++ + LY   E+ D+CRG
Sbjct: 124 MKKLIDQDYDVIKKMTPRDEVIKVFTDRGEEYKLRLVEDMPEEKAMGLYYHQEYVDMCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +T  +K F KL K++GAYWRGD+    L RIYGTAW  +++L  Y+  +EE+E RD
Sbjct: 184 PHVPNTKFLKSF-KLTKISGAYWRGDAKNEQLQRIYGTAWADKKQLAAYIKRIEEAENRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHL 304
           HRK+ + +DLFH+ E+  G++FWH  GW I+Q L  YMR+  +D+ Y+EI TPQ++D  L
Sbjct: 243 HRKIGKALDLFHMQEEAPGMVFWHANGWTIYQVLEQYMRKVQQDNGYQEIKTPQIVDFTL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGH  +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYR+LP+RLAE
Sbjct: 303 WEKSGHAANYAENMFT------THSESRNYAVKPMNCPCHVQVFNQGLKSYRDLPIRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNEPSGSLHG+MRVRGFTQDDAH+FCTKEQ+  E      L + +YKDFGFE++ 
Sbjct: 357 FGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTKEQIGKEVADFIKLTLDVYKDFGFEEVQ 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +KLSTRPEKRVG DALWD AE  +   LD         +   +  GEGAFYGPK E+ LK
Sbjct: 417 MKLSTRPEKRVGDDALWDLAEKSLADALDAAG------LEWELQPGEGAFYGPKIEFSLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D +GR WQCGTIQ DFNLP R +A YV   +E+  PVM+HRA+ GS ERFIGI+IE++ G
Sbjct: 471 DCLGRVWQCGTIQCDFNLPVRLDASYVTEENERDQPVMLHRAILGSFERFIGILIEHYAG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
            +P WLSP+QA V  IT S  E ++++   LK + L   +D RNE I +KIRE ++++IP
Sbjct: 531 FMPPWLSPVQACVMNITDSQAEASEQVVAKLKENGLRAISDLRNEKIGFKIRERTLERIP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
            +++ GD+E  E ++ +R         +S +DA   L K ++
Sbjct: 591 YLLVLGDREVEEGTVNVRTRSGKNLGTMS-VDAFIDLVKSAV 631


>gi|260551943|ref|ZP_05825805.1| threonyl-tRNA synthetase [Acinetobacter sp. RUH2624]
 gi|260405346|gb|EEW98841.1| threonyl-tRNA synthetase [Acinetobacter sp. RUH2624]
          Length = 640

 Score =  643 bits (1659), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 307/642 (47%), Positives = 434/642 (67%), Gaps = 16/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPE 65
           +T P+G  KNF    +  +VA+SI   LAK  VA  +N ++ D  D + E S ++IITP+
Sbjct: 4   ITLPNGDQKNFDHPVSVMEVAQSIGPGLAKNTVAGRVNDRLVDACDLITEDSTLQIITPK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  AV+ ++PE ++ IGP+IE+GFYYD    +PF+ D++A IE++
Sbjct: 64  DEEGLEIIRHSCAHLVGHAVKQLFPEAKMVIGPVIEEGFYYDIWMPRPFTLDDMAAIEER 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+++I +D   +K+    ++    F ++ E YK+ ++  +P +  + LY   ++ D+CRG
Sbjct: 124 MKKLIDQDYDVVKKMTPRDEVIAEFTARGEEYKLRLIADMPEETQMGLYYHQDYLDMCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +T  +K F KL K++GAYWRGD+    L RIYGTAW  +++L  Y+  +EE+EKRD
Sbjct: 184 PHVPNTKFLKSF-KLTKISGAYWRGDAKNEQLQRIYGTAWADKKQLAAYIKRIEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHL 304
           HRK+ + +DLFH+ E+  G++FWH  GW I+Q L  YMR+  +D+ Y+EI TPQ++D  L
Sbjct: 243 HRKIGKALDLFHMQEEAPGMVFWHANGWTIYQVLEQYMRKVQQDNGYQEIKTPQIVDFTL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGH  +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYR+LP+RLAE
Sbjct: 303 WEKSGHAANYAENMFT------THSESRNYAVKPMNCPCHVQVFNQGLKSYRDLPIRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNEPSGSLHG+MRVRGFTQDDAH+FCTKEQ+  E      L + +YKDFGFE++ 
Sbjct: 357 FGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTKEQIGKEVADFIQLTLDVYKDFGFEEVQ 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +KLSTRPEKRVG DALWD AE  +   LD         +   +  GEGAFYGPK E+ LK
Sbjct: 417 MKLSTRPEKRVGDDALWDLAEKSLADALDAAG------LKWELQPGEGAFYGPKIEFSLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D +GR WQCGTIQ DFNLP R +A YV   +E+  PVM+HRA+ GS ERFIGI+IE++ G
Sbjct: 471 DCLGRVWQCGTIQCDFNLPVRLDASYVTEENERDQPVMLHRAILGSFERFIGILIEHYAG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
            +P WLSP+QA V  IT +  E ++++   LK + L   +D RNE I +KIRE ++++IP
Sbjct: 531 FMPPWLSPVQACVMNITDAQAEASEQVVAKLKENGLRAISDLRNEKIGFKIRERTLERIP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
            +++ GD+E  E ++ +R         +S +DA   L K ++
Sbjct: 591 YLLVLGDREVEEGTVNVRTRSGKNLGTMS-VDAFIDLVKSAV 631


>gi|146328703|ref|YP_001209437.1| threonyl-tRNA synthetase [Dichelobacter nodosus VCS1703A]
 gi|166223338|sp|A5EVK6|SYT_DICNV RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|146232173|gb|ABQ13151.1| threonyl-tRNA synthetase [Dichelobacter nodosus VCS1703A]
          Length = 640

 Score =  643 bits (1659), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 293/625 (46%), Positives = 430/625 (68%), Gaps = 19/625 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP+   +T PDGS K+F    TG ++AESI  SLAK A+AV I  K+ DLSD +  +  +
Sbjct: 1   MPT---ITLPDGSKKSFNAAITGQEIAESIGSSLAKAAIAVRIGEKLQDLSDTIACDADV 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L +IRHSCAH++  A++ +WP+ ++ IGP+IE+GFYYD + +  F+ ++L
Sbjct: 58  TIITDKDEAGLEIIRHSCAHLLGHALKQLWPQAKMVIGPVIENGFYYDIEADHRFTPEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-ENVTLYRQGE 178
           A +E++MQ++ A      K++    +ARE+F  ++E +K+ +++   A  + V LY   E
Sbjct: 118 AVLEERMQKLAATGYSVKKEWTPVARAREIFHERQEDFKIRLIDDFDADVKEVGLYYHQE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV   G++K F KL K++G+YWRGD+    L RIYG A+ +++EL  YL   
Sbjct: 178 YVDMCRGPHVPDMGKIKAF-KLTKLSGSYWRGDAQAEALQRIYGVAFRSKKELDDYLTQQ 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
            E+EKRDHRK+ + +DLFH+ E+  G++FWH KGW I++ + +YMR K+ K  Y+E+  P
Sbjct: 237 AEAEKRDHRKIGKALDLFHLQEEAPGMVFWHAKGWTIYREIENYMRTKLRKYGYQEVQGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           Q+LD+ LW++SGHWD +  NMF   C D+       FA+KPMNCPGHV +FN GLKSYRE
Sbjct: 297 QILDRSLWEKSGHWDKFGGNMFTC-CIDN-----HDFAVKPMNCPGHVQIFNQGLKSYRE 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R AEFG  +RNEPSG+LHG+MRVR F QDD H+FC + Q+  E  +   ++  +Y D
Sbjct: 351 LPIRYAEFGICHRNEPSGTLHGIMRVRRFVQDDGHIFCARNQVRVEIERTCRMVYEVYDD 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF+ + + LSTRPEKRVGSD +WD+AE  ++  L+         +   +  GEGAFYGP
Sbjct: 411 FGFKNVELALSTRPEKRVGSDEIWDEAERGLQEALEA------QNLAFRLQPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ LKD++GR WQCGT+Q+DF++P+R  A Y++ H EK  PVMIHRA+ GS+ERFIGI
Sbjct: 465 KIEFTLKDSLGRRWQCGTVQLDFSMPARLGAEYIDEHGEKQTPVMIHRAILGSLERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE + GN+P+WLSP+QA++  IT +  +Y Q +     +  +  E D RNE I+YKIRE
Sbjct: 525 LIEQYAGNMPVWLSPVQAMIMPITDTHADYVQNVMQKFIAAGIRAEIDLRNEKISYKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIR 622
           H+++++P +++ GD+E    ++ +R
Sbjct: 585 HTLQRVPFLLVAGDREKQSNTLSVR 609


>gi|52842920|ref|YP_096719.1| threonyl-tRNA synthetase [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
 gi|52630031|gb|AAU28772.1| threonyl tRNA synthase [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
          Length = 646

 Score =  643 bits (1659), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 311/624 (49%), Positives = 431/624 (69%), Gaps = 18/624 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SI 59
           MP+   +  PDG++K+F    T  DVA  IS  LAK A+A  ++G + D S  ++E  S+
Sbjct: 10  MPN---VKLPDGNVKHFEAPLTIYDVAHHISPGLAKAAIAGRVDGVLVDTSYLIKEDCSL 66

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            I+T +   SL +IRHS AH++A+AV++++P  QV IGP+IEDGFYYDF  E+ F+ D+L
Sbjct: 67  IIVTEKHEDSLEIIRHSTAHLLAQAVKALFPSAQVTIGPVIEDGFYYDFAFERSFTPDDL 126

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           + IE KM E+   +    ++ L   +A + F+   E YK +I+  IP  E ++LYRQG++
Sbjct: 127 SLIEAKMHELAKANLSITRRELPRNEAIQYFKDLGEEYKAKIIADIPENEALSLYRQGDF 186

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV STG +K F KL KVAGAYWRGDSN  ML RIYGTAW  ++ L +YL+ LE
Sbjct: 187 EDLCRGPHVPSTGFLKAF-KLTKVAGAYWRGDSNNEMLQRIYGTAWADKKSLEEYLFRLE 245

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+EKRDHRKL + +DLFH  +   G++FWH KGW I+Q L  YMR ++ D  Y+EI TPQ
Sbjct: 246 EAEKRDHRKLGKALDLFHFQDIAPGMVFWHPKGWTIYQELEHYMRNRLVDFGYQEIRTPQ 305

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D+ LW++SGHW ++R  MF  +  +      R +A+KPM+CP HV ++NHGLKSYR+L
Sbjct: 306 LVDRSLWEKSGHWANFRDEMFVTETEN------RHYAVKPMSCPCHVQIYNHGLKSYRDL 359

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RL+EFG+ +R EPSG+LHGLMRVR   QDDAH+FCT++Q+ +E   +  L+ S+YKDF
Sbjct: 360 PLRLSEFGNCHRCEPSGALHGLMRVRNMVQDDAHIFCTEDQIQSEVAMMLELVQSVYKDF 419

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF +I  +L+ RPEKRVGSD +WD AE  +K  +   +  + + ++     GEGAFYGPK
Sbjct: 420 GFTEIKYRLALRPEKRVGSDDVWDKAETALKLAM---QGRNIEWVDAP---GEGAFYGPK 473

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E  L D +GR WQCGTIQVDF++P+R  A YV     K  PVM+HRA+ GS ERF+GI+
Sbjct: 474 IECSLSDCLGRIWQCGTIQVDFSMPARLEASYVAEDGSKQTPVMLHRAILGSFERFMGIL 533

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE++ G LPLWLSP+QAIV TI+    EYA+++   L+   +    D RNE I +KIREH
Sbjct: 534 IEHYAGKLPLWLSPVQAIVLTISEKQNEYAEKVRKTLQKRGIRANFDLRNEKIGFKIREH 593

Query: 599 SIKKIPIIIICGDKEASERSIGIR 622
           +++KIP +++ GDKE     + +R
Sbjct: 594 TLQKIPYLLVVGDKEVENCQVAVR 617


>gi|73919802|sp|Q5ZS05|SYT_LEGPH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
          Length = 637

 Score =  643 bits (1658), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 313/624 (50%), Positives = 433/624 (69%), Gaps = 18/624 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SI 59
           MP ++KL  PDG++K+F    T  DVA  IS  LAK A+A  ++G + D S  ++E  S+
Sbjct: 1   MP-NVKL--PDGNVKHFEAPLTIYDVAHHISPGLAKAAIAGRVDGVLVDTSYLIKEDCSL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            I+T +   SL +IRHS AH++A+AV++++P  QV IGP+IEDGFYYDF  E+ F+ D+L
Sbjct: 58  IIVTEKHEDSLEIIRHSTAHLLAQAVKALFPSAQVTIGPVIEDGFYYDFAFERSFTPDDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           + IE KM E+   +    ++ L   +A + F+   E YK +I+  IP  E ++LYRQG++
Sbjct: 118 SLIEAKMHELAKANLSITRRELPRNEAIQYFKDLGEEYKAKIIADIPENEALSLYRQGDF 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV STG +K F KL KVAGAYWRGDSN  ML RIYGTAW  ++ L +YL+ LE
Sbjct: 178 EDLCRGPHVPSTGFLKAF-KLTKVAGAYWRGDSNNEMLQRIYGTAWADKKSLEEYLFRLE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+EKRDHRKL + +DLFH  +   G++FWH KGW I+Q L  YMR ++ D  Y+EI TPQ
Sbjct: 237 EAEKRDHRKLGKALDLFHFQDIAPGMVFWHPKGWTIYQELEHYMRNRLVDFGYQEIRTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D+ LW++SGHW ++R  MF  +  +      R +A+KPM+CP HV ++NHGLKSYR+L
Sbjct: 297 LVDRSLWEKSGHWANFRDEMFVTETEN------RHYAVKPMSCPCHVQIYNHGLKSYRDL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RL+EFG+ +R EPSG+LHGLMRVR   QDDAH+FCT++Q+ +E   +  L+ S+YKDF
Sbjct: 351 PLRLSEFGNCHRCEPSGALHGLMRVRNMVQDDAHIFCTEDQIQSEVAMMLELVQSVYKDF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF +I  +L+ RPEKRVGSD +WD AE  +K  +   +  + + ++     GEGAFYGPK
Sbjct: 411 GFTEIKYRLALRPEKRVGSDDVWDKAETALKLAM---QGRNIEWVDAP---GEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E  L D +GR WQCGTIQVDF++P+R  A YV     K  PVM+HRA+ GS ERF+GI+
Sbjct: 465 IECSLSDCLGRIWQCGTIQVDFSMPARLEASYVAEDGSKQTPVMLHRAILGSFERFMGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE++ G LPLWLSP+QAIV TI+    EYA+++   L+   +    D RNE I +KIREH
Sbjct: 525 IEHYAGKLPLWLSPVQAIVLTISEKQNEYAEKVRKTLQKRGIRANFDLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIR 622
           +++KIP +++ GDKE     + +R
Sbjct: 585 TLQKIPYLLVVGDKEVENCQVAVR 608


>gi|332290253|ref|YP_004421105.1| threonyl-tRNA synthetase [Gallibacterium anatis UMN179]
 gi|330433149|gb|AEC18208.1| threonyl-tRNA synthetase [Gallibacterium anatis UMN179]
          Length = 643

 Score =  643 bits (1658), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 304/619 (49%), Positives = 420/619 (67%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPE 65
           +T PDGS + F    T  +VA+SI   LAK  +A  +NG   D  D + E  ++EIIT +
Sbjct: 4   ITLPDGSQRQFEQPVTVLEVAQSIGAGLAKACIAGRVNGVRKDACDLINEDANVEIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ ++P  ++AIGP IE+GFYYD D +   ++++L +IEK+
Sbjct: 64  DEDGLEIIRHSCAHLLGHALKQLYPNAKMAIGPTIENGFYYDIDLDHSLTAEDLEKIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE-SIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K+ +S +KA ++FE + E YK+ ILE +I       LY   E+ D+CR
Sbjct: 124 MLELAKTNYDVIKEPVSWQKAHDVFEQRGEPYKMAILEENIEKTATPALYHHLEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKL KVAGAYWRGDSN  ML RIYGTAW  +++L +YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLQKVAGAYWRGDSNNKMLQRIYGTAWADKKQLAEYLKRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ + +DL+H+ E+  G++FWH  GW IF+ L +++R K+K  DY+E+  P ++D+ 
Sbjct: 243 DHRKIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRAKLKQYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW +Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWQNYGDLMFT------TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+ Q+ +E      ++  IY  FGF  I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTENQIESEVTSCIKMVYDIYSTFGFTDI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPE R+GSD +WD AE       D  K    + +   V  GEGAFYGPK E+ L
Sbjct: 417 YVKLSTRPEHRIGSDEMWDRAE------ADLAKALEHNGLEYEVQPGEGAFYGPKLEFAL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D+IGR+WQCGT+Q+DF LP R NA YV   +E+  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 RDSIGREWQCGTVQLDFALPGRLNASYVAEDNERKTPVMIHRAILGSIERFIGIITEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P QA+V  IT S  +Y Q +   L    L +++D RNE I +KIREH++K++
Sbjct: 531 GFFPAWLAPTQAVVMNITDSQADYVQNVVKTLSDAGLRVKSDLRNEKIGFKIREHTLKRV 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++CGDKE +E  + +R
Sbjct: 591 PYMLVCGDKEIAEGKVAVR 609


>gi|326795752|ref|YP_004313572.1| threonyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
 gi|326546516|gb|ADZ91736.1| threonyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
          Length = 638

 Score =  642 bits (1657), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 298/619 (48%), Positives = 425/619 (68%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPE 65
           +T PDGS + F    T   VAE I   LAK  VA  ING + D  + + E S + ++T  
Sbjct: 4   ITLPDGSQRTFSEPVTLMQVAEDIGPGLAKATVAGKINGVLVDACEVISEDSNVSLVTGR 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHS AH++  AV+ ++P  ++AIGP+I +GFYYD   E+PF+ D++A IEK+
Sbjct: 64  DEEGLEIIRHSFAHLVGHAVKQLYPTAKMAIGPVINEGFYYDIAFERPFTLDDMAAIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESI-PAKENVTLYRQGEWFDLCR 184
           + E+I +D   +K     ++AR  F+ + E+YKV++++ +  +   V LYR  E+ D+CR
Sbjct: 124 IAELIKKDYDVVKTMTPIDEARRQFDERGESYKVQLIDDMDESVTEVGLYRHEEYMDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +T +V ++FKLMK+AGAYWRGDSN  ML R+YGTAW+ ++EL  YL  +EE+EKR
Sbjct: 184 GPHVPNT-RVLRYFKLMKLAGAYWRGDSNNEMLQRVYGTAWSDKKELKAYLLRIEEAEKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQH 303
           DHRKL +++DLFH+ E+  G++FWH KGW+++Q +  YMR+K + ++Y+E+ TPQ++D+ 
Sbjct: 243 DHRKLGKKLDLFHVQEEAPGMVFWHPKGWRLYQAVEQYMRQKQLDNNYQEVKTPQIVDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SGHW  Y+ NMF     +      R +A+KPMNCP H+ V+N GLKSYR+LP R+A
Sbjct: 303 LWEKSGHWGKYQENMFTTHSEN------RDYAVKPMNCPCHIQVYNQGLKSYRDLPFRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSG+LHG+MRVR F QDD H+F T+ Q+ +E  +   L+  +Y DFGF+ I
Sbjct: 357 EFGSCHRNEPSGALHGIMRVRNFVQDDGHIFVTENQIQSEVSEFIKLLHEVYADFGFDNI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           + +LSTRPE+RVGSD +WD AE  +   LD      ++      L GEGAFYGPK E+ L
Sbjct: 417 IYRLSTRPEQRVGSDEVWDKAEKALADALDVAGLEWEE------LPGEGAFYGPKIEFSL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           KDAIGR WQCGTIQVDF++P+R  A YV+    +  PVM+HRA+ GS+ERFIGI+IE  +
Sbjct: 471 KDAIGRVWQCGTIQVDFSMPTRLGAQYVSEDGSRQTPVMLHRAIVGSLERFIGILIEETE 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G+ PLWL+P Q ++  IT    EY + +   L S+    + D RNE I +KIREH++++I
Sbjct: 531 GSFPLWLAPEQVVIMNITDRQTEYCENLEKTLNSNGFRAKLDLRNEKIGFKIREHTLQRI 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +I+ GDKE     + +R
Sbjct: 591 PYLIVVGDKEVENGKVAVR 609


>gi|242239483|ref|YP_002987664.1| threonyl-tRNA synthetase [Dickeya dadantii Ech703]
 gi|242131540|gb|ACS85842.1| threonyl-tRNA synthetase [Dickeya dadantii Ech703]
          Length = 642

 Score =  642 bits (1657), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 297/641 (46%), Positives = 432/641 (67%), Gaps = 16/641 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D  D +  +  + IIT +
Sbjct: 4   ITLPDGSQRHYERAVSPFDVASDIGPGLAKACIAGKVNGELVDARDLIETDAQLSIITTK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L ++RHSCAH++  A++ +WPE Q+AIGP+I++GFYYD D ++P + ++L  +EK+
Sbjct: 64  DDDGLDILRHSCAHLLGHAIKQLWPETQMAIGPVIDNGFYYDVDLDRPLTQEDLDLLEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+  +D   +K+ +S ++AR+ F ++ E+YKV IL E+I   +   LY   E+ D+CR
Sbjct: 124 MHELAEKDYDVIKKKVSWQEARDTFAARGESYKVAILDENISRDDRPGLYHHEEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKL K +GAYWRGDSN  ML RIYGTAW  +++L+ YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLQKTSGAYWRGDSNNKMLQRIYGTAWADKKQLSAYLQRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF+ L +++R K+K+  Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEAFVRMKLKEYQYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW++Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWENYKEAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+  E      ++  +Y  FGFEKI
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQVRTEVNSCIKMVYDMYGTFGFEKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPEKR+GSD +WD AE  +   L      +++ I      GEGAFYGPK E+ L
Sbjct: 417 AVKLSTRPEKRIGSDEMWDRAEEDLAAAL------TENGIPFEYQPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF+LP R NA YV  ++E+  PVMIHRA+ GS+ERFIGI+ E F 
Sbjct: 471 HDCLDRAWQCGTVQLDFSLPGRLNASYVGENNERQVPVMIHRAILGSMERFIGILTEEFA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+Q +V  IT S  +Y  E+   L+   + ++ D RNE I +KIREH+++++
Sbjct: 531 GFFPTWLAPVQVVVMNITDSQSDYVSELTRKLQDAGIRVKADLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P +++CGDKE     + +R         + + + I  L +E
Sbjct: 591 PYMLVCGDKEVEAGKVAVRTRRGKDLGSIDVSEVINKLQEE 631


>gi|110834994|ref|YP_693853.1| threonyl-tRNA synthetase [Alcanivorax borkumensis SK2]
 gi|110648105|emb|CAL17581.1| Threonyl-tRNA synthetase [Alcanivorax borkumensis SK2]
          Length = 638

 Score =  642 bits (1656), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 309/646 (47%), Positives = 432/646 (66%), Gaps = 13/646 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           +    PDG+   F    +  ++A  IS+ LAK+A+A   NG + D+  P+ +G ++EIIT
Sbjct: 3   VSYQLPDGANMEFEQPVSALEIAGRISKKLAKQALAAKANGNLIDVYLPIDDGATVEIIT 62

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +   +L +IRH  AH+MA+AVQ ++P+ QV IGP I +GFYYDF ++ PF+ D+L  IE
Sbjct: 63  RDTDEALELIRHDAAHVMAQAVQELFPDTQVTIGPTIANGFYYDFHRDIPFTPDDLKTIE 122

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M EI+ R+    ++    ++A   F  K E +K EI+  +PA + V+LYRQG++ DLC
Sbjct: 123 KRMLEIVRRNEEIRREIWDRDEAVAFFLEKGEEFKAEIIRDLPADQEVSLYRQGDFIDLC 182

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ ST ++   FKL KVAGAYWRGD+++  L RIYGTAW  ++EL  YL  LEE+EK
Sbjct: 183 RGPHLPSTSKLGDGFKLTKVAGAYWRGDADKAQLQRIYGTAWRDKKELNAYLKQLEEAEK 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQ 302
           RDHRKLA+EM LFHI ++  G +FWH KGW++ + L +Y+R K+ K  YEE++TPQ++D+
Sbjct: 243 RDHRKLAKEMGLFHIQQEAVGSMFWHPKGWRMRKNLENYIRGKMEKGGYEEVSTPQMMDR 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+QSGHWD Y  +MF V C  D     +  A+KPMNCPGHV +F  G+ SYR+LP+RL
Sbjct: 303 ILWEQSGHWDKYGEDMFTV-CTHDH----KEMAVKPMNCPGHVQIFKQGITSYRDLPIRL 357

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EF +++RNE  G+LHGLMR R F+QDDAH+FCT+EQ+  E      ++  +Y DFGF+ 
Sbjct: 358 GEFTTLFRNEAHGALHGLMRARSFSQDDAHIFCTEEQVNEETAGFIKMLREVYADFGFDS 417

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             +K S RP+ R GSD  WD AE  ++  ++++       +   +  GEGAFYGPK E++
Sbjct: 418 FRIKFSDRPDNRAGSDETWDKAEGALRSAVESLG------LECELNPGEGAFYGPKLEFV 471

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+DAIGRDWQCGT+QVDF LP R +A YV     +  PVM+HRAV GS+ERF+GI+IE+ 
Sbjct: 472 LRDAIGRDWQCGTLQVDFVLPDRLDAEYVAEDGSRQRPVMLHRAVLGSLERFLGILIEST 531

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G+LPLWL+P    V TIT+SA EYA  +   L +  +  E D RNE I +K+REHS  K
Sbjct: 532 AGHLPLWLAPRPVAVCTITNSADEYATTVQQKLVAAGIPAELDIRNEKIGFKVREHSRAK 591

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
            P I + G++EA    + IR  GS  T+ V L +A+  L + +  P
Sbjct: 592 TPRIWVIGEQEAQHNQVAIRTLGSQATETVDLDEAVAALAEATRLP 637


>gi|52425108|ref|YP_088245.1| threonyl-tRNA synthetase [Mannheimia succiniciproducens MBEL55E]
 gi|73919804|sp|Q65TQ0|SYT_MANSM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|52307160|gb|AAU37660.1| ThrS protein [Mannheimia succiniciproducens MBEL55E]
          Length = 643

 Score =  642 bits (1656), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 300/641 (46%), Positives = 432/641 (67%), Gaps = 16/641 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPE 65
           +T PDGS + F    +  +VA+SI   LAK  +A  +NG+  D  D + E S +EIIT +
Sbjct: 4   ITLPDGSQRQFDNPVSVLEVAQSIGAGLAKATIAGRVNGERRDACDMITEDSTLEIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ ++P+V++AIGP I++GFYYD D E   S ++L  +EK+
Sbjct: 64  DEDGLEIIRHSCAHLLGHAIKQLFPDVKMAIGPTIDNGFYYDVDLEHSLSQEDLDALEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K+ +S ++AR+ FE + E YK+ IL E+I   ++  LY   E+ D+CR
Sbjct: 124 MLELAKTNYDVVKRRVSWQEARDTFEKRGEPYKMAILDENIAKDDHPALYHHEEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKL KVAGAYWRGDS   ML RIYGTAW  +++L +YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLQKVAGAYWRGDSKNKMLQRIYGTAWADKKQLNEYLTRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ + +DL+H+ E+  G++FWH  GW IF+ L +++R K+K+ DY+E+  P ++D+ 
Sbjct: 243 DHRKIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW +Y   MF  +  +      R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWQNYGDLMFTTQSEN------REYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+ +E      ++  IY  FGF  I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQIESEVTSCIRMVYDIYSTFGFTNI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPE R+G DA+WD AE  +   L      + + +   +  GEGAFYGPK E+ L
Sbjct: 417 AVKLSTRPENRIGDDAMWDRAEQGLANAL------AHNGLQYEIQEGEGAFYGPKIEFAL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D + R+WQCGT+Q+DF LP R NA YV   +++  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 RDCLDREWQCGTVQLDFALPGRLNASYVAEDNDRRTPVMIHRAILGSIERFIGIITEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+QA+V  IT S  EY Q++   L    L +++D RNE + +K+REH+++++
Sbjct: 531 GFFPSWLAPVQAVVMNITDSQAEYVQKVTKTLSDAGLRVKSDLRNEKVGFKVREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P +++CGDKE SE  + +R          S+ + + IL  +
Sbjct: 591 PYMLVCGDKEISEGKVSVRTRRGADLGTYSVEEFVEILKNQ 631


>gi|54298706|ref|YP_125075.1| threonyl-tRNA synthetase [Legionella pneumophila str. Paris]
 gi|73919801|sp|Q5X1H3|SYT_LEGPA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|53752491|emb|CAH13923.1| Threonyl tRNA synthetase [Legionella pneumophila str. Paris]
          Length = 637

 Score =  642 bits (1655), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 313/624 (50%), Positives = 429/624 (68%), Gaps = 18/624 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SI 59
           MP ++KL  PDG++K+F    T  DVA  IS  LAK A+A  ++G + D S  ++E  S+
Sbjct: 1   MP-NVKL--PDGNVKHFEAPLTIYDVAHHISPGLAKAAIAGRVDGVLVDTSYLIKEDCSL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            I+T +   SL +IRHS AH++A+AV++++P  QV IGP+IEDGFYYDF  E+ F+ D+L
Sbjct: 58  IIVTEKHEDSLEIIRHSTAHLLAQAVKALFPSAQVTIGPVIEDGFYYDFAFERSFTPDDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           + IE KM E+   +    ++ L   +A + F+   E YK +I+  IP  E ++LYRQG++
Sbjct: 118 SLIEAKMHELAKANLSITRRELPRNEAIQYFKGLGEEYKAKIIADIPENEALSLYRQGDF 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV STG +K F KL KVAGAYWRGDSN  ML RIYGTAW  ++ L +YL+ LE
Sbjct: 178 EDLCRGPHVPSTGFLKAF-KLTKVAGAYWRGDSNNEMLQRIYGTAWADKKSLEEYLFRLE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+EKRDHRKL + +DLFH  +   G++FWH KGW I+Q L  YMR ++ D  Y+EI TPQ
Sbjct: 237 EAEKRDHRKLGKALDLFHFQDIAPGMVFWHPKGWTIYQELEHYMRNRLVDFGYQEIRTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D+ LW++SGHW ++R  MF  +  +      R +A+KPM+CP HV ++NHGLKSYR+L
Sbjct: 297 LVDRSLWEKSGHWANFRDEMFVTETEN------RHYAVKPMSCPCHVQIYNHGLKSYRDL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RL+EFG+ +R EPSG+LHGLMRVR   QDDAH+FCT++Q+ +E   +  L+ S+YKDF
Sbjct: 351 PLRLSEFGNCHRCEPSGALHGLMRVRNMVQDDAHIFCTEDQIQSEVAMMLELVQSVYKDF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF +I  +L+ RPEKRVGSD +WD AE  +K  +        D        GEGAFYGPK
Sbjct: 411 GFTEIKYRLALRPEKRVGSDDVWDKAETALKLAMLGRNIEWVDAP------GEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E  L D +GR WQCGTIQVDF++P+R  A YV     K  PVM+HRA+ GS ERF+GI+
Sbjct: 465 IECSLSDCLGRIWQCGTIQVDFSMPARLEASYVAEDGSKQTPVMLHRAILGSFERFMGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE++ G LPLWLSP+QA+V TI+    EYA+++   L+   +    D RNE I +KIREH
Sbjct: 525 IEHYAGKLPLWLSPVQAVVLTISEKQNEYAEKVRKTLQKRGIRANFDLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIR 622
           +++KIP +++ GDKE     + +R
Sbjct: 585 TLQKIPYLLVVGDKEVENCQVAVR 608


>gi|88810665|ref|ZP_01125922.1| threonyl-tRNA synthetase [Nitrococcus mobilis Nb-231]
 gi|88792295|gb|EAR23405.1| threonyl-tRNA synthetase [Nitrococcus mobilis Nb-231]
          Length = 641

 Score =  642 bits (1655), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 303/624 (48%), Positives = 421/624 (67%), Gaps = 18/624 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSI 59
           MP+   +T PDGS + +    T   VAE I   LAK AVA  ++G+V DL   ++E G++
Sbjct: 1   MPT---VTLPDGSERRYDRPVTLRQVAEDIGPGLAKAAVAGRLDGRVLDLDHLIQEDGAV 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            I+T  D   L ++RHS AH++A+AV+ ++P+ QV IGP+IE+GFYYDF  ++ FS  +L
Sbjct: 58  SIVTSRDAEGLEILRHSTAHLLAQAVKQLYPDAQVTIGPVIENGFYYDFAYQRAFSEQDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IE +M+E+   D    ++     +A   F    E YK  I+E IP  E V+LYRQG++
Sbjct: 118 RAIEVRMEELARADIEVQREVWDRSEAMAFFRGIGEEYKARIIEEIPPAEVVSLYRQGDF 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV  TG +K F KL KVAGAYWRGD+   ML RIYGTAW  ++ L  YL+ LE
Sbjct: 178 IDLCRGPHVPRTGMLKAF-KLTKVAGAYWRGDARNEMLQRIYGTAWPDRKALQHYLHALE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+++RDHR+LA+  DLFH+ E+  G++FWH  GW+++  L  Y+R K+    Y E+ TP+
Sbjct: 237 EAQRRDHRRLAKIQDLFHLQEEAPGMVFWHPNGWRVYLLLQDYLRAKLDAHGYREVRTPE 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D+ LW++SGHW  +RA+MF       T  + R +A+KPMNCP HV +FN GLKSYR+L
Sbjct: 297 LVDRSLWERSGHWQKFRADMFT------TESEKRDYAVKPMNCPCHVQIFNQGLKSYRDL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFG+ +RNE SG+LHGLMRVR F QDDAH+FCT+EQ+ +E     +L  ++Y+DF
Sbjct: 351 PLRLAEFGNCHRNEASGTLHGLMRVRNFVQDDAHIFCTEEQIQSEVAGFLDLAEAVYRDF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF++++V LSTRPE+RVG+DALWD AE  +   L         R++  V  GEGAFYGPK
Sbjct: 411 GFDEVIVALSTRPEQRVGADALWDKAEQALDQALRA------RRLDWEVKPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E  +KD++GR WQCGT+QVDF++P R  A YV     +  PVM+HRA+FGS ERFIG++
Sbjct: 465 IELSMKDSLGRVWQCGTMQVDFSMPQRLGAQYVAEDGARLVPVMLHRAIFGSFERFIGVL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE++ G  P+WL+PIQA+V  IT     YA  I   L  H      D RNE I +KIREH
Sbjct: 525 IEHYGGAWPVWLAPIQAVVLNITDRQGAYASGIEKRLAEHGFRAYGDLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIR 622
           +++K+P ++I G++E    ++ +R
Sbjct: 585 TLQKVPYLLIVGERERESMTVAVR 608


>gi|124025364|ref|YP_001014480.1| threonyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A]
 gi|166225477|sp|A2C155|SYT_PROM1 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|123960432|gb|ABM75215.1| Threonyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A]
          Length = 640

 Score =  642 bits (1655), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 303/642 (47%), Positives = 430/642 (66%), Gaps = 16/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS KN+    T   +A  I   LAK A+A  +NG + D   P+  +  I+IIT +
Sbjct: 4   ITLPDGSEKNYESSVTIEKIATDIGPGLAKAALAGRVNGNLLDTCIPITNDAEIQIITSK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHS AH++  AV+ ++PE ++AIGP+IEDGFYYD   +  F+  +L +IEK+
Sbjct: 64  DNEGLEIIRHSFAHLLGHAVKQLYPEAKMAIGPVIEDGFYYDISYKDTFTPVDLEKIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           ++E+I +D     + +S  KA ++F  + E +K++I+++IP  E + LY+  E+ D+CRG
Sbjct: 124 IKELINKDYDVDVEVVSPAKATQVFSERGEVFKLDIIKNIPKDEIIKLYKHEEYIDMCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +T  ++ F KLMKV+GAYWRGDSN  ML RIYGTAW   +EL +Y+  +EE+EKRD
Sbjct: 184 PHVPNTRHLRAF-KLMKVSGAYWRGDSNNEMLQRIYGTAWKNSKELKEYINRIEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHL 304
           HRKL +++ LFH  E+  G+IFWH  GW I++ L  ++R  I K DY+E+ +PQ++ + L
Sbjct: 243 HRKLGKKLSLFHFQEEAPGMIFWHPNGWTIYRVLQDFIRETISKYDYQELKSPQIVCRSL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHWD ++ +MF       T  + + +A+KPMNCP HV VFN GLKSYR+LP+RL+E
Sbjct: 303 WEKSGHWDKFKEDMFT------TTSENKEYAIKPMNCPCHVQVFNQGLKSYRDLPIRLSE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNEPSG+LHGLMRVR F QDD H+FCT EQ+  E     +L+  +YK FGF  I+
Sbjct: 357 FGSCHRNEPSGALHGLMRVRNFVQDDGHIFCTNEQIQEEVQSFIDLVFEVYKAFGFNSIL 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +KLSTRPEKRVGSD +WD +E  +   LD+        ++  +L GEGAFYGPK E+ LK
Sbjct: 417 IKLSTRPEKRVGSDDVWDKSEKALSDALDS------KGLDWSLLPGEGAFYGPKIEFSLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D + R WQCGTIQVDF++P R N+ Y++   +K  PVM+HRA+ GS ERFIGI+IEN+ G
Sbjct: 471 DCLNRVWQCGTIQVDFSMPERLNSSYIDVDGKKQPPVMLHRAILGSFERFIGILIENYSG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
           NLP+WL P+Q +V  IT    +   +  + L  +      D RNE + +KIREH++++IP
Sbjct: 531 NLPIWLCPLQIVVMGITDRNNDACLDTKSKLIKYGFRASVDTRNEKVGFKIREHTMQRIP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
            +II GDKE     I +R        K++ LD   ++  ES+
Sbjct: 591 FLIIIGDKEEENNEISVRTREGKDLGKMT-LDKFKVIMDESI 631


>gi|332306910|ref|YP_004434761.1| threonyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332174239|gb|AEE23493.1| threonyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 638

 Score =  642 bits (1655), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 303/631 (48%), Positives = 426/631 (67%), Gaps = 16/631 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS + F    +  DVA  I   LAK  +A  ++G   D  D + ++  ++IIT +
Sbjct: 4   ITLPDGSQRQFDNAVSVFDVANDIGPGLAKATIAGKVDGVRVDACDLIEKDAQLQIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ +WP+V++AIGP I++GFYYD D E   + ++L ++EK+
Sbjct: 64  DEDGLEIIRHSCAHLIGHAIKQLWPDVKMAIGPTIDNGFYYDIDMEHSINDEDLVKLEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K+ +S ++AR+ FE++ E YK++IL E+IP      LY   E+ D+CR
Sbjct: 124 MLELAKTNYNVVKKVVSWQEARDTFEARGEEYKLQILDENIPKDATPGLYHHEEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +  + FKLMKVAGAYWRGDS+  ML RIYGTAW  +++L  YL  LEE+EKR
Sbjct: 184 GPHVPNM-RFCQHFKLMKVAGAYWRGDSDNKMLQRIYGTAWADKKQLKAYLNRLEEAEKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ + +DLFH  E+  G++FWH  GW I+  L  ++R K+++ +Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKALDLFHWQEEAPGMVFWHNDGWSIYTELEKFVRSKLREYEYQEVKAPLMMDRS 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SGHWD Y  NMF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKSGHWDKYAENMFT------TTSEKREYAVKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFG  +RNEPSG+LHGLMRVRGFTQDDAH+FCT++Q+  E     + +  IYK FGFE I
Sbjct: 357 EFGCCHRNEPSGALHGLMRVRGFTQDDAHIFCTEDQILAEVGGCIDSVYEIYKIFGFENI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPEKRVGSD +WD AE  +   L      +   I+   L GEGAFYGPK E+ L
Sbjct: 417 SVKLSTRPEKRVGSDEVWDKAEKELAEAL------TSKGIDFQYLPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF++P R  + YV    E+  PVMIHRA+ GS+ERFIGI+IE + 
Sbjct: 471 HDCLDRAWQCGTVQLDFSMPGRLGSTYVAEDGERKVPVMIHRAILGSLERFIGILIEEYS 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  PLWL+P QA+V  IT +  EYAQ++   LK   +  ++D RNE I +KIREH+++++
Sbjct: 531 GFFPLWLAPTQAVVMNITDNQSEYAQKVVKKLKEIGIRAKSDLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           P +++ GDKE     I +R        K+S+
Sbjct: 591 PYLLVVGDKEIEAGEIAVRSRKGDDLGKMSV 621


>gi|109898814|ref|YP_662069.1| threonyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
 gi|109701095|gb|ABG41015.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase
           [Pseudoalteromonas atlantica T6c]
          Length = 638

 Score =  641 bits (1654), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 303/631 (48%), Positives = 425/631 (67%), Gaps = 16/631 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS + F    +  DVA  I   LAK  +A  ++G   D  D + ++  ++IIT +
Sbjct: 4   ITLPDGSQRQFDNAVSVLDVANDIGPGLAKATIAGKVDGVRVDACDLIEQDAQLQIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ +WP+V++AIGP I++GFYYD D E   + ++L ++EK+
Sbjct: 64  DDDGLEIIRHSCAHLIGHAIKQLWPDVKMAIGPTIDNGFYYDIDMEHSLNDEDLVKLEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K+ +S ++AR+ FE++ E YK++IL E+IP      LY   E+ D+CR
Sbjct: 124 MLELAKTNYDVVKKVVSWQEARDTFEARGEEYKLQILDENIPKDATPGLYHHEEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +  + FKLMKVAGAYWRGDS+  ML RIYGTAW  +++L  YL  LEE+EKR
Sbjct: 184 GPHVPNM-RFCQHFKLMKVAGAYWRGDSDNKMLQRIYGTAWADKKQLKAYLNRLEEAEKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ + +DLFH  E+  G++FWH  GW I+  L  ++R K+++ +Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKALDLFHWQEEAPGMVFWHNDGWSIYTELEKFVRSKLREYEYDEVKAPLMMDRS 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SGHWD Y  NMF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKSGHWDKYAENMFT------TTSEKREYAVKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFG  +RNEPSG+LHGLMRVRGFTQDDAH+FCT +Q+  E     + +  IYK FGFE I
Sbjct: 357 EFGCCHRNEPSGALHGLMRVRGFTQDDAHIFCTDDQILAEVGGCIDSVYEIYKIFGFENI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPEKRVGSD +WD AE  +   L      +   I+   L GEGAFYGPK E+ L
Sbjct: 417 SVKLSTRPEKRVGSDEVWDKAEKELAEAL------TSKGIDFQYLPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF++P R  + YV    E+  PVMIHRA+ GS+ERFIGI+IE + 
Sbjct: 471 HDCLDRAWQCGTVQLDFSMPGRLGSTYVAEDGERKVPVMIHRAILGSLERFIGILIEEYS 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  PLWL+P QA+V  IT +  EYAQ++   LK   +  ++D RNE I +KIREH+++++
Sbjct: 531 GFFPLWLAPTQAVVMNITDNQSEYAQKVVKKLKEIGIRAKSDLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           P +++ GDKE     I +R        K+S+
Sbjct: 591 PYLLVVGDKEIEAGEIAVRSRKGDDLGKMSV 621


>gi|57239615|ref|YP_180751.1| threonyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|58579605|ref|YP_197817.1| threonyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|73919788|sp|Q5H9Z4|SYT_EHRRW RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|57161694|emb|CAH58624.1| threonyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|58418231|emb|CAI27435.1| Threonyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
          Length = 633

 Score =  641 bits (1654), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 308/639 (48%), Positives = 432/639 (67%), Gaps = 15/639 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           I + F D S K F     GSD+   +   L  KA+A+ IN K  DLS  + E    E+IT
Sbjct: 2   INVYFSDNSCKQFLPGIKGSDIITHLFPELLNKAIAIKINDKSLDLSTEITEDCKFEVIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +    L +IRH  AHIMA+A++ ++PEV+  +GP I+DGFYYDF  +  FSS+EL +IE
Sbjct: 62  LDSDEGLDIIRHDTAHIMAQAIKEMFPEVKTVVGPTIKDGFYYDFSTDHIFSSNELEKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           +KM+EII ++  F+++  + E+A   F +K E YKV+I+  IP  EN+T+Y+QG + DLC
Sbjct: 122 EKMREIIKKNESFIREVWTREEAIRFFSNKGEDYKVKIIAKIPIHENITVYKQGSFIDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH  ST ++ K FKL KV+G+YW G++N   L RIYGTAW T++EL  YL  L E EK
Sbjct: 182 RGPHAPST-KISKAFKLTKVSGSYWEGNTNNAQLQRIYGTAWRTEEELKLYLNNLIEVEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQ 302
           RDHRK+ +E++LFHI  +  G IFWH KG  I++ + +Y+R+K++++ Y E+ TP +L +
Sbjct: 241 RDHRKIGKELELFHIQNEALGQIFWHEKGLIIYRIIENYIRKKLENNGYIEVKTPYLLSK 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+QSGHWD +R +MF  +       D +  A+KPMNCP HV +FN  ++SY++LP+R+
Sbjct: 301 TLWEQSGHWDKFREHMFLSEI------DNKVVAIKPMNCPCHVQIFNSKIRSYKDLPLRM 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFG+ +R E SG+LHGLMRVR FTQDDAH+FCT++Q+  E LK  NL++ +Y+ FGF+ 
Sbjct: 355 AEFGTCHRYESSGALHGLMRVRSFTQDDAHIFCTEDQIIEEALKFCNLLMEVYEVFGFKD 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+VK S RPEKR GSD +WD AE  +K    ++K ++   +N  +  G+GAFYGPK E+ 
Sbjct: 415 ILVKFSDRPEKRAGSDKIWDKAEEALKA---SVKAAN---LNYVLNPGDGAFYGPKLEFT 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LKDAIGR+WQCGT+Q+DF LP R  A+Y  S  +K HP+M+HRA+ G+IERFIGI+IE+ 
Sbjct: 469 LKDAIGREWQCGTLQMDFVLPERLGAYYTGSDGKKHHPIMLHRAILGTIERFIGILIEHH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G LP+WL+P+Q  + TIT  A++YA  + +     ++  E D  NE INYKIR H  KK
Sbjct: 529 SGKLPIWLAPVQLSILTITEDAIDYAISLKHKAMKQNIRAEVDITNEKINYKIRSHISKK 588

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           IP++ I G KE    S+ IR   S     +S   A+  L
Sbjct: 589 IPVLWIIGKKEIETESVSIRYLESKDQHIMSSDKALKTL 627


>gi|58617659|ref|YP_196858.1| threonyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel]
 gi|73919787|sp|Q5FGP1|SYT_EHRRG RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|58417271|emb|CAI28384.1| Threonyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel]
          Length = 633

 Score =  641 bits (1654), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 308/639 (48%), Positives = 432/639 (67%), Gaps = 15/639 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           I + F D S K F     GSD+   +   L  KA+A+ IN K  DLS  + E    E+IT
Sbjct: 2   INVYFSDNSCKQFLPGIKGSDIITHLFPELLNKAIAIKINDKSLDLSTEITEDCKFEVIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +    L +IRH  AHIMA+A++ ++PEV+  +GP I+DGFYYDF  +  FSS+EL +IE
Sbjct: 62  LDSDEGLDIIRHDTAHIMAQAIKEMFPEVKTVVGPTIKDGFYYDFSTDHIFSSNELEKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           +KM+EII ++  F+++  + E+A   F +K E YKV+I+  IP  EN+T+Y+QG + DLC
Sbjct: 122 EKMREIIKKNESFIREVWTREEAIRFFSNKGEDYKVKIIAKIPIHENITVYKQGSFIDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH  ST ++ K FKL KV+G+YW G++N   L RIYGTAW T++EL  YL  L E EK
Sbjct: 182 RGPHAPST-KISKAFKLTKVSGSYWEGNTNNAQLQRIYGTAWRTEEELKLYLNNLIEVEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQ 302
           RDHRK+ +E++LFHI  +  G IFWH KG  I++ + +Y+R+K++++ Y E+ TP +L +
Sbjct: 241 RDHRKIGKELELFHIQNEALGQIFWHEKGLIIYRIIENYIRKKLENNGYIEVKTPYLLSK 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+QSGHWD +R +MF  +       D +  A+KPMNCP HV +FN  ++SY++LP+R+
Sbjct: 301 TLWEQSGHWDKFREHMFLSEI------DNKVVAIKPMNCPCHVQIFNSKIRSYKDLPLRM 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFG+ +R E SG+LHGLMRVR FTQDDAH+FCT++Q+  E LK  NL++ +Y+ FGF+ 
Sbjct: 355 AEFGTCHRYEASGALHGLMRVRSFTQDDAHIFCTEDQIIEEALKFCNLLMEVYEVFGFKD 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+VK S RPEKR GSD +WD AE  +K    ++K ++   +N  +  G+GAFYGPK E+ 
Sbjct: 415 ILVKFSDRPEKRAGSDKIWDKAEEALKA---SVKAAN---LNYVLNPGDGAFYGPKLEFT 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LKDAIGR+WQCGT+Q+DF LP R  A+Y  S  +K HP+M+HRA+ G+IERFIGI+IE+ 
Sbjct: 469 LKDAIGREWQCGTLQMDFVLPERLGAYYTGSDGKKHHPIMLHRAILGTIERFIGILIEHH 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G LP+WL+P+Q  + TIT  A++YA  + +     ++  E D  NE INYKIR H  KK
Sbjct: 529 SGKLPIWLAPVQLSILTITEDAIDYAISLKHKAMKQNIRAEVDITNEKINYKIRSHISKK 588

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           IP++ I G KE    S+ IR   S     +S   A+  L
Sbjct: 589 IPVLWIIGKKEIETESVSIRYLESKDQHIMSSDKALKTL 627


>gi|152988735|ref|YP_001347870.1| threonyl-tRNA synthetase [Pseudomonas aeruginosa PA7]
 gi|166225481|sp|A6V485|SYT_PSEA7 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|150963893|gb|ABR85918.1| threonyl-tRNA synthetase [Pseudomonas aeruginosa PA7]
          Length = 640

 Score =  641 bits (1653), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 288/618 (46%), Positives = 427/618 (69%), Gaps = 15/618 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS ++F    + ++VA+SI   LAK  +A  ++G++ D  D + R+ +++IITP+
Sbjct: 4   ITLPDGSQRSFDHPVSVAEVAQSIGAGLAKATLAGKVDGRLVDACDTIERDATLQIITPK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A I+++
Sbjct: 64  DEEGLEIIRHSCAHLVGHAVKQLYPTAKMVIGPVIEEGFYYDIFFERPFTPEDMAAIQQR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+E+I +D   +K+     +  ELF+S+ E YK+ +++ +P ++ + LY   E+ D+CRG
Sbjct: 124 MRELIDKDYDVIKKMTPRAEVIELFKSRGEDYKLRLIDDMPDEKAMGLYFHEEYVDMCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +T +  K F+L K++GAYWRGDS    L RIYGTAW  +++L  Y+  +EE+EKRD
Sbjct: 184 PHVPNT-RFLKAFQLTKISGAYWRGDSKNEQLQRIYGTAWADKKQLAAYIQRIEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHL 304
           HR++ +++DLFH+ E+  G++FWH  GW ++Q L  YMR+  +D  Y E+ TPQV+D+ L
Sbjct: 243 HRRIGKQLDLFHLQEEAPGMVFWHPNGWSVYQVLEQYMRKVQRDHGYVEVRTPQVVDRIL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHW +Y  NMF       T  + R +A+KPMNCP HV +FN GLKSYR+LP+RLAE
Sbjct: 303 WERSGHWSNYAENMFT------TASESRDYAVKPMNCPCHVQIFNQGLKSYRDLPLRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FG+ +RNEPSG+LHG+MRVRGFTQDDAH+FCT+EQ+  E      L + +Y+DFGF  I 
Sbjct: 357 FGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEEQVKKEAADFIKLTLQVYRDFGFTDIA 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +KLSTRP KRVGSD LWD AE  +   L+      +  +      GEGAFYGPK E+ LK
Sbjct: 417 MKLSTRPAKRVGSDELWDRAEGALADALN------ESGLAWEYQPGEGAFYGPKIEFTLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D +GR+WQCGT+Q D NLP R +A Y+   + +  PVM+HRA+ GS ERFIG++IE++ G
Sbjct: 471 DCLGRNWQCGTLQYDPNLPERLDASYIAEDNNRKRPVMLHRAILGSFERFIGMLIEHYAG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P WL+P QA+V  IT    ++A E+  +L       ++D RNE I +KIREH++ K+P
Sbjct: 531 AFPAWLAPTQAVVMNITDKQADFAAEVVRILGESGFRAKSDLRNEKIGFKIREHTLLKVP 590

Query: 605 IIIICGDKEASERSIGIR 622
            +++ GD+E   +++ +R
Sbjct: 591 YLLVIGDREVESKAVAVR 608


>gi|70729481|ref|YP_259219.1| threonyl-tRNA synthetase [Pseudomonas fluorescens Pf-5]
 gi|68343780|gb|AAY91386.1| threonyl-tRNA synthetase [Pseudomonas fluorescens Pf-5]
          Length = 640

 Score =  641 bits (1653), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 296/624 (47%), Positives = 427/624 (68%), Gaps = 18/624 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP+   +T PDGS ++F    + ++VA SI   LAK  +A  +NGK+ D  D +  + ++
Sbjct: 1   MPT---ITLPDGSQRSFDHAVSVAEVAASIGAGLAKATLAGKVNGKLVDACDVIDGDATL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           +IITP+D   L +IRHSCAH++  AV+ ++P  ++ IGP+I++GFYYD   E+PF+ +++
Sbjct: 58  QIITPKDEEGLEIIRHSCAHLVGHAVKQLYPTAKMVIGPVIDEGFYYDIAYERPFTPEDM 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A IE++MQ++I +D   +K+     +  E+F+++ E YK+ ++E +P ++ + LY   E+
Sbjct: 118 AAIEQRMQQLIEKDYDVIKKVTPRAEVIEVFKARGEDYKLRLVEDMPNEQAMGLYYHEEY 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            D+CRGPHV +T +  K FKL K++GAYWRGD+    L RIYGTAW  +++L  Y+  +E
Sbjct: 178 VDMCRGPHVPNT-RFLKSFKLTKLSGAYWRGDAKNEQLQRIYGTAWADKKQLAAYIQRIE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQ 298
           E+EKRDHRK+ + + LFH  E+  G++FWH  GW ++Q L  YMR+  +D+ Y EI TPQ
Sbjct: 237 EAEKRDHRKIGKRLGLFHTQEEAPGMVFWHPNGWTLYQVLEQYMRKVQRDNGYLEIKTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHW +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYREL
Sbjct: 297 VVDRSLWEKSGHWANYAENMFT------TESESRDYAIKPMNCPCHVQVFNQGLKSYREL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFG+ +RNEPSG+LHG+MRVRGFTQDDAH+FCT++QM  E      L + +Y DF
Sbjct: 351 PMRLAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEDQMQAESAAFIKLTMDVYADF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+ I +KLSTRPEKRVGSD LWD AE+                +   +  GEGAFYGPK
Sbjct: 411 GFKDIEMKLSTRPEKRVGSDDLWDRAESA------LAAALDSAGLPYDLQPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD +GR WQCGT+Q+DFNLP R  A YV+  + + HPVM+HRA+ GS ERF+GI+
Sbjct: 465 IEFSLKDCLGRVWQCGTLQLDFNLPIRLGAEYVSEDNSRKHPVMLHRAILGSFERFVGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+++G  P WL+P QA+V  IT    ++A E+   L       ++D RNE I +KIREH
Sbjct: 525 IEHYEGAFPAWLAPTQAVVMNITDKQADFALEVEKTLNQSGFRAKSDLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIR 622
           ++ K+P +++ GD+E   +++ +R
Sbjct: 585 TLLKVPYLLVIGDREVEMQTVAVR 608


>gi|332971649|gb|EGK10599.1| threonine--tRNA ligase [Kingella kingae ATCC 23330]
          Length = 637

 Score =  641 bits (1653), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 297/643 (46%), Positives = 438/643 (68%), Gaps = 17/643 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           + +T PDGS++ +    T + +AESI   LAK  VA  +NG + D  DP+ ++ +++IIT
Sbjct: 2   LNITLPDGSVRQYESPVTVAQIAESIGAGLAKATVAGKVNGALVDACDPITQDSTVQIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A IE
Sbjct: 62  PKDQEGVEIIRHSCAHLVGHAVKQLFPTAKMVIGPVIEEGFYYDILPEKPFTPEDMAAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIP-AKENVTLYRQGEWFDL 182
           ++M+++I +D   +K+     +  E+F+S+ E YK+ +++ +  + + + +Y   E+ D+
Sbjct: 122 ERMKQLINQDYDVIKKMTPRAEVVEIFKSRGEEYKLRLIDDMDDSIQAMGMYFHQEYVDM 181

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +T +  K FKL K++GAYWRGDSN   L RIYGTAW  + EL  Y+  +EE+E
Sbjct: 182 CRGPHVPNT-RFLKHFKLTKMSGAYWRGDSNNEQLQRIYGTAWANKDELKAYITRIEEAE 240

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL +++DLFH+ ++  G++FWH +GW ++Q +  +MRR++ +  Y+E+ TPQV+D
Sbjct: 241 KRDHRKLGKQLDLFHLQDEAPGMVFWHPRGWALWQVIEQHMRRELTEAGYQEVKTPQVMD 300

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           +  W++SGHW +Y+ NMF       T  + R +A+KPMNCPGHV +FNHGL+SYR+LP+R
Sbjct: 301 KTFWEKSGHWANYKDNMFL------TSSEKREYAVKPMNCPGHVQIFNHGLRSYRDLPMR 354

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+  E    + L++ IY+ FGF+
Sbjct: 355 LAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIAEETKAFNLLVMKIYQQFGFK 414

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + +KLS RPEKR GS+ +WD AE  ++  L       ++      L GEGAFYGPK EY
Sbjct: 415 NVSIKLSLRPEKRAGSEEIWDKAEQGLRDALTACGVEWEE------LPGEGAFYGPKVEY 468

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+GR WQCGTIQ+DF LP R  A YV   + K  PVM+HRA+ GS+ERFIGI+IE 
Sbjct: 469 HIKDALGRSWQCGTIQLDFVLPERLEAEYVAEDNTKKRPVMLHRAILGSLERFIGILIEE 528

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G+ PLWL+P+Q +V  IT    +YA+E+   L++    ++ D RNE I YKIR +S  
Sbjct: 529 HAGSFPLWLAPVQMVVMNITEKQADYAKEVQAKLQAAGFRVDLDIRNEKIGYKIRSNSEM 588

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           + P  +  GDKE     + IR+  +     VS+ + I +L  E
Sbjct: 589 RYPYQLTVGDKEMENGQVSIRK-KADNLGSVSVDEFIAMLQDE 630


>gi|119774900|ref|YP_927640.1| threonyl-tRNA synthetase [Shewanella amazonensis SB2B]
 gi|166225496|sp|A1S6G4|SYT_SHEAM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|119767400|gb|ABL99970.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Shewanella
           amazonensis SB2B]
          Length = 642

 Score =  641 bits (1653), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 301/643 (46%), Positives = 425/643 (66%), Gaps = 17/643 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPE 65
           +T PDGS + F    +  DVA  I   LAK  +A  +NG++ D  D + E  S+ IIT  
Sbjct: 4   ITLPDGSQRVFANPVSTMDVAADIGPGLAKACIAGRVNGELKDACDLIHEDASLSIITAR 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L ++RHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D E   ++D++A +EK+
Sbjct: 64  DEEGLEILRHSCAHLLGHAIKQLWPQTKMAIGPVIDNGFYYDVDLEHKLTADDIAALEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENV-TLYRQGEWFDLCR 184
           M E+   D   +K+ +S ++AR+ FE + E+YK+ IL+   AK+    LY   E+ D+CR
Sbjct: 124 MLELAKTDYDVVKRVVSWQEARDTFEGRGESYKMAILDENIAKDATPALYHHEEYTDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKLM VAGAYWRGDSN  ML RIYGTAW  ++ L  +L  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLMSVAGAYWRGDSNNKMLQRIYGTAWGDKKALNTHLARLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF+ L +++R K+ + DY+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWSIFRELETFIRHKLSEYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWERSGHWDKYADAMFT------TASENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFG  +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+  E      ++   Y  FGFE I
Sbjct: 357 EFGCCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQVQEEVSACIRMVYDTYSTFGFENI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+G D +WD AE+ +      I+  + + I   +L GEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEKRIGDDDMWDRAESAL------IEALNANGIAFEILPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+D+ LP R  A YV   + +  PVMIHRA+ GS+ERFIGI+IE + 
Sbjct: 471 HDCLDRAWQCGTVQLDYALPGRLGATYVAEDNARQTPVMIHRAILGSLERFIGILIEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+QA+V  IT    +Y +E+    K   +    D RNE I +KIREH+++++
Sbjct: 531 GRFPAWLAPVQAVVMNITDKQADYVEELVKFFKEQGIRASQDLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           P +++ GD+E   R I +R        K+S +DA     KE +
Sbjct: 591 PYLLVVGDQEMENREIAVRTRDGKDLGKMS-IDAFVASVKEQI 632


>gi|56417255|ref|YP_154329.1| threonyl-tRNA synthetase [Anaplasma marginale str. St. Maries]
 gi|73919765|sp|Q5P9F6|SYT_ANAMM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|56388487|gb|AAV87074.1| threonyl-tRNA synthetase [Anaplasma marginale str. St. Maries]
          Length = 636

 Score =  641 bits (1653), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 294/640 (45%), Positives = 437/640 (68%), Gaps = 15/640 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
           +I  +FP+ +   F  H TGS+VA ++   +A+  VA+ ++G + DL+ P+ ++GS++ +
Sbjct: 3   NITTSFPNKTAAAFHKHVTGSEVASAMFPEIAESIVALFVDGNLQDLATPISKDGSVDPV 62

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T E    + +IRH  AHIMA AV+ I+P+ ++AIGP IE+GFYYDFD     S  +   I
Sbjct: 63  TIESNTGMDIIRHDAAHIMARAVREIFPDTKLAIGPTIENGFYYDFDLSHSLSEKDFEAI 122

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E+KM +IIA+D  F+++    E+A + FE   E YK+EIL  +P  E +T+Y+ GE+ DL
Sbjct: 123 ERKMADIIAKDERFVREVWPRERAIKFFEDLGEHYKLEILSKVPLGEEITVYKHGEFVDL 182

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH  S   VK F KL K++GAYW GD    ML R+YGTAW++ + L  Y++ ++E+E
Sbjct: 183 CRGPHAPSARYVKAF-KLTKISGAYWLGDQKNKMLQRVYGTAWHSSEALASYIHNMQEAE 241

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRK+A+++  FHI  +  G +FWH KGW I++ +  Y+R K+K   Y E+ TP +LD
Sbjct: 242 KRDHRKIAKDLGWFHIQNEALGQVFWHDKGWVIYRIIEEYIRCKLKKHGYHEVKTPIMLD 301

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW++SGHW+ ++ NMF V+       D +  A+KPMNCP HV +F   ++SY+ELP+R
Sbjct: 302 RKLWEKSGHWEKFKENMFVVE------DDKKELAIKPMNCPCHVQIFKSKIRSYKELPIR 355

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AEFG  +RNEPSGSL+GLMRVRGFTQDDAH+FCT EQ+ +E L+ + L++ +YKDFGF+
Sbjct: 356 MAEFGMCHRNEPSGSLYGLMRVRGFTQDDAHIFCTHEQVRDEVLRFYELLMEVYKDFGFD 415

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + VKLS RPE R+GSD +WD +E  +   ++ +    Q  IN G    EGAFYGPK E+
Sbjct: 416 SVTVKLSDRPENRIGSDEIWDRSEQSLMEPMNAL--GVQYTINKG----EGAFYGPKLEF 469

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            LKD+IGR+WQCGT+Q+DF LP R  A+Y+    +K  PV+IHRA+ G+IERFIGI+IE+
Sbjct: 470 TLKDSIGREWQCGTVQLDFVLPDRLGAYYIGEDGKKHIPVIIHRAILGTIERFIGILIEH 529

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + GN+P WL+P+Q  + T++    EYA+++A +    ++ +E +   E I++KIR+    
Sbjct: 530 YAGNIPAWLAPVQLEILTVSGEVAEYARDLAEMASQENVRVELNAAEENISHKIRKAIFN 589

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           K+PI+ + G  EA +R + +RR+GS  T +++   A+  L
Sbjct: 590 KVPIVWVVGKSEAGDRGVSVRRYGSGETCRMAAGKALKTL 629


>gi|237808486|ref|YP_002892926.1| threonyl-tRNA synthetase [Tolumonas auensis DSM 9187]
 gi|259516783|sp|C4LFH3|SYT_TOLAT RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|237500747|gb|ACQ93340.1| threonyl-tRNA synthetase [Tolumonas auensis DSM 9187]
          Length = 642

 Score =  641 bits (1653), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 297/641 (46%), Positives = 425/641 (66%), Gaps = 16/641 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  DVA SI   LAK  +A  +NG++ D  + +  + ++ IIT +
Sbjct: 4   ITLPDGSQRQFENAVSVLDVAASIGAGLAKACIAGRVNGELVDACELIETDATLSIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L ++RHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D +Q  + +++  +E +
Sbjct: 64  DQEGLEILRHSCAHLLGHAIKQLWPQTKMAIGPVIDNGFYYDVDLDQMLTEEDIQALEAR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+  +D   +K+ +S ++AR++FES+ E YKV IL E+I   +   LY   E+ D+CR
Sbjct: 124 MLELAQKDYDVVKKTVSWQEARDVFESRSETYKVAILDENIARDDKPGLYHHEEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKL K +GAYWRGD+   ML RIYGTAW  +++L  YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLQKTSGAYWRGDAKNKMLQRIYGTAWADKKQLNAYLQRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF+ L +++R+K+++ DYEE+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWIIFRELETFIRQKLREYDYEEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWERSGHWDKYADAMFT------TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FC + Q+ +E      ++   Y  FGF+ I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCAENQIQDEVSACIRMVYDTYSTFGFKNI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPEKR+GSD +WD AE  +   L        + I   +  GEGAFYGPK E+ L
Sbjct: 417 AVKLSTRPEKRIGSDEMWDRAEEALSAAL------KHNNIEFDLQPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF LP R  A YV   +++  PVMIHRA+ GS+ERFIGI+ E   
Sbjct: 471 HDCLDRAWQCGTVQLDFALPGRLGATYVGEDNDRHVPVMIHRAILGSMERFIGILTEETA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  PLWL+P+QA+V  IT +  +Y +E+ N L    +  + D RNE I +KIREH++K++
Sbjct: 531 GYFPLWLAPLQAVVMNITDNQADYVKEVVNTLNESGIRAKADLRNEKIGFKIREHTLKRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P +++CGDKE     I +R        K  + D +  L KE
Sbjct: 591 PYMLVCGDKEMEAGEIAVRTRRGVDLGKFKVTDLVEQLRKE 631


>gi|254447322|ref|ZP_05060789.1| threonyl-tRNA synthetase [gamma proteobacterium HTCC5015]
 gi|198263461|gb|EDY87739.1| threonyl-tRNA synthetase [gamma proteobacterium HTCC5015]
          Length = 637

 Score =  640 bits (1652), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 294/641 (45%), Positives = 436/641 (68%), Gaps = 15/641 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDP-VREGSIEIITPE 65
           +T PDG+ K F    +  +VA+SI   LAK  +A  +NG++ D   P V +  ++IIT  
Sbjct: 4   ITLPDGTQKPFDAPVSTLEVAQSIGPGLAKATIAGRVNGQLRDAKLPIVEDAELQIITDR 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHS AH+M  AV+ ++PE ++AIGP+I+ GFYYD D E+PF+ +++  IE++
Sbjct: 64  DAEGLEIIRHSFAHLMGHAVKQLYPEAKMAIGPVIDYGFYYDIDYERPFTPEDVEAIEQR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           ++ +  +D        + ++A + F+ + E YKVEI   IP  E V LY   E+ D+CRG
Sbjct: 124 IKALTKKDYEVEVVVSNPQEAVDTFKQRDEPYKVEIASEIPEGEEVKLYHHEEYTDMCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +T  ++ F KLM VAGAYWRGDS+  ML RIYGTAW  +++L  +L  LEE+EKRD
Sbjct: 184 PHVPNTRHLRHF-KLMSVAGAYWRGDSDNKMLQRIYGTAWTNKKDLKAHLTMLEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHL 304
           HRKLA+ +DLFH+ E+  G++FWH KGW+I+  +  Y+R+ ++  DY+E++TPQV+D+ L
Sbjct: 243 HRKLAKSLDLFHMQEEAPGMVFWHDKGWQIYVQVQDYIRQLLRQHDYQEVHTPQVVDRVL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHWD +   +F+    +      R +A+KPMNCP HV ++N GLKSYR+LP+R+AE
Sbjct: 303 WEKSGHWDKFGDMIFSTHSEN------RDYAVKPMNCPCHVQIYNQGLKSYRDLPLRMAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNEPSG+LHGLMRVR F QDDAH+FCT++Q+ +E     +L+  +YKDFGFE++ 
Sbjct: 357 FGSCHRNEPSGTLHGLMRVRNFVQDDAHIFCTEDQIQSEVSAFIDLVFQVYKDFGFEEVQ 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           V LSTRPE+RVG DALWD AEN ++  L+         ++  +  GEGAFYGPK E+ LK
Sbjct: 417 VALSTRPEERVGEDALWDKAENALEVALNN------KDLDFTLQPGEGAFYGPKIEFALK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D +GR WQCGTIQVDF++P+R  A YV     +  PVM+HRA+ GS+ERFIGI+IE  +G
Sbjct: 471 DCLGRVWQCGTIQVDFSMPTRLEADYVAEDGSRKTPVMLHRAILGSLERFIGILIEEHEG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P+WL+P+QA +  IT    ++ ++    L++  L + +D RNE I +KIREH+++++P
Sbjct: 531 RFPVWLAPVQAAILNITDKQADFVEKARQTLENQGLRVVSDLRNEKIGFKIREHTLQRVP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
            + + GD+E    S+ +R         +++ +A+ ++ + +
Sbjct: 591 YLFVVGDREVENESVAVRTRSGEDLGTMTVDEAVQLIKRAA 631


>gi|329113775|ref|ZP_08242547.1| Threonyl-tRNA synthetase [Acetobacter pomorum DM001]
 gi|326696901|gb|EGE48570.1| Threonyl-tRNA synthetase [Acetobacter pomorum DM001]
          Length = 640

 Score =  640 bits (1652), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 299/613 (48%), Positives = 417/613 (68%), Gaps = 16/613 (2%)

Query: 36  KKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           K  +A  ++G + D S  +  +   E +   D  +L++IRH  AH++A+AV  ++P   +
Sbjct: 31  KDVLARRVDGALFDHSTLLSGDRPSEPVFRSDADALSLIRHDTAHVLAQAVSELFPGTAL 90

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
           A GP  E GF+YDF  E+ F+ D+L +IE +M EI+ RD P +++    + A    +   
Sbjct: 91  ATGPATEQGFFYDFAAERAFTDDDLVRIEARMHEIVDRDEPIIREEWKRKSALAWCQENG 150

Query: 155 EAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNR 214
           + YK EI+ S+PA   ++ YRQG + DLCRGPH+ STGQ+   F+L+  AGAYW+GD N 
Sbjct: 151 QPYKAEIIRSLPADAVLSFYRQGNFVDLCRGPHLGSTGQIGHEFRLLGTAGAYWKGDRNN 210

Query: 215 PMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWK 274
           PML RI+GTA     EL  +    EE+ +RDHR+L REMDLFH   +  G +FWH  GW 
Sbjct: 211 PMLQRIHGTACRDANELAAWEQRQEEAARRDHRRLGREMDLFHFQPEAPGAVFWHPNGWT 270

Query: 275 IFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           +FQTL++Y+R R+  ++Y EINTP ++D  LWQ SGHW+ +  NMF       T  + RT
Sbjct: 271 LFQTLLAYLRARQQAENYVEINTPDIMDLSLWQASGHWEKFGENMFT------TETEGRT 324

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
           +ALKPMNCPG V VF HGLKSYR+LP+R+AEFG V+R EPSG+LHGLMRVR FTQDDAH+
Sbjct: 325 YALKPMNCPGGVQVFRHGLKSYRDLPLRMAEFGKVHRFEPSGALHGLMRVRAFTQDDAHI 384

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIM-KGVL 452
           FCT EQM  E  +I +L++SIYKDFGF  + +K S RPEKRVGSD +WD +E+ + +GV 
Sbjct: 385 FCTPEQMEAETQRICHLVLSIYKDFGFNNVRIKFSDRPEKRVGSDEIWDRSEDALRRGVE 444

Query: 453 DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
            +  + +++        GEGAFYGPK E++L+DAIGRDWQCGT+QVD NLP R +A YV 
Sbjct: 445 ASGLSYTRNP-------GEGAFYGPKLEFVLRDAIGRDWQCGTVQVDLNLPQRLDAHYVG 497

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIA 572
           +  +K  PVM+HRA+FGS+ERFIGI++E+  G+LP WL+P+Q +V TIT++A EYA ++ 
Sbjct: 498 ADGDKHPPVMLHRALFGSLERFIGILLEHHAGHLPFWLAPVQVVVATITAAADEYADDLI 557

Query: 573 NLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
             L+   + +  D RNE I YKIREHS+ K+P+++I G KEA   ++ IR +G+     +
Sbjct: 558 KALRQRGVRVVPDLRNEKIAYKIREHSLAKVPVLLIVGKKEAQAGTVSIREYGNPDAPTI 617

Query: 633 SLLDAIPILTKES 645
           ++  AI +L   S
Sbjct: 618 AMETAINLLADAS 630


>gi|238895235|ref|YP_002919970.1| threonyl-tRNA synthetase [Klebsiella pneumoniae NTUH-K2044]
 gi|238547552|dbj|BAH63903.1| threonyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
          Length = 642

 Score =  640 bits (1652), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 293/619 (47%), Positives = 424/619 (68%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS ++F    +  DVA  I   LAK  +A  +NG++ D  DP+  + ++ IIT +
Sbjct: 4   ITLPDGSQRHFDHAVSPMDVALDIGPGLAKATIAGRVNGELVDACDPIESDSTLSIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ +WP  ++AIGP++++GFYYD D +   + +++  +EK+
Sbjct: 64  DEEGLEIIRHSCAHLLGHAIKQLWPNTKMAIGPVVDNGFYYDVDLDHTLTQEDIDALEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+  ++   +K+ +S  +ARE F  + E+YKV IL E+I   +   LY   E+ D+CR
Sbjct: 124 MHELAEKNYDVIKKKVSWHEARETFVKRGESYKVSILDENIAHDDKPGLYHHEEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKLMK AGAYWRGDSN  ML RIYGTAW  ++ L  YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLMKTAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF+ L +++R K+K+  Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELETFVRSKLKEYQYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHWD+Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWDNYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT++Q+ +E      ++  +Y  FGFEKI
Sbjct: 357 EFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEDQVRDEVNACIRMVYDMYSTFGFEKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+GSD  WD AE  +   L+      ++ I     LGEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEKRIGSDETWDRAEADLAVALE------ENNIPFEYQLGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF+LP R +A YV  ++E+  PVMIHRA+ GS+ERFIGI+ E F 
Sbjct: 471 YDCLDRAWQCGTVQLDFSLPQRLSASYVGENNERQVPVMIHRAILGSLERFIGILTEEFA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P W++P+Q +V  IT S  EY  E+   L++  + ++ D RNE I +KIREH+++++
Sbjct: 531 GFFPTWIAPVQVVVMNITDSQAEYVNELTRKLQNAGIRVKADLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++CGDKE     + +R
Sbjct: 591 PYMLVCGDKEVEAGKVAVR 609


>gi|296388793|ref|ZP_06878268.1| threonyl-tRNA synthetase [Pseudomonas aeruginosa PAb1]
          Length = 640

 Score =  640 bits (1652), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 288/618 (46%), Positives = 427/618 (69%), Gaps = 15/618 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS ++F    + ++VA+SI   LAK  +A  ++G++ D  D + R+ +++IITP+
Sbjct: 4   ITLPDGSQRSFDHPVSVAEVAQSIGAGLAKATLAGKVDGRLVDACDTIDRDATLQIITPK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A I+++
Sbjct: 64  DEEGLEIIRHSCAHLVGHAVKQLYPTAKMVIGPVIEEGFYYDIFFERPFTPEDMAAIQQR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+E+I +D   +K+     +  ELF+S+ E YK+ +++ +P ++ + LY   E+ D+CRG
Sbjct: 124 MRELIDKDYDVIKKMTPRAEVIELFKSRGEDYKLRLIDDMPDEKAMGLYFHEEYVDMCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +T +  K F+L K++GAYWRGDS    L RIYGTAW  +++L  Y+  +EE+EKRD
Sbjct: 184 PHVPNT-RFLKAFQLTKISGAYWRGDSKNEQLQRIYGTAWADKKQLAAYIQRIEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHL 304
           HR++ +++DLFH+ E+  G++FWH  GW ++Q L  YMR+  +D  Y E+ TPQV+D+ L
Sbjct: 243 HRRIGKQLDLFHLQEEAPGMVFWHPNGWSVYQVLEQYMRKVQRDHGYVEVRTPQVVDRIL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHW +Y  NMF       T  + R +A+KPMNCP HV +FN GLKSYR+LP+RLAE
Sbjct: 303 WERSGHWSNYAENMFT------TSSESRDYAVKPMNCPCHVQIFNQGLKSYRDLPLRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FG+ +RNEPSG+LHG+MRVRGFTQDDAH+FCT+EQ+  E      L + +Y+DFGF  I 
Sbjct: 357 FGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEEQVKKEAADFIKLTLQVYRDFGFTDIA 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +KLSTRP KRVGSD LWD AE  +   L+      +  +      GEGAFYGPK E+ LK
Sbjct: 417 MKLSTRPAKRVGSDELWDRAEGALADALN------ESGLAWEYQPGEGAFYGPKIEFTLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D +GR+WQCGT+Q D NLP R +A Y+   + +  PVM+HRA+ GS ERFIG++IE++ G
Sbjct: 471 DCLGRNWQCGTLQYDPNLPERLDASYIAEDNNRKRPVMLHRAILGSFERFIGMLIEHYAG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P WL+P QA+V  IT    ++A E+  +L       ++D RNE I +KIREH++ K+P
Sbjct: 531 AFPAWLAPTQAVVMNITDKQADFAAEVVRMLGESGFRAKSDLRNEKIGFKIREHTLLKVP 590

Query: 605 IIIICGDKEASERSIGIR 622
            +++ GD+E   +++ +R
Sbjct: 591 YLLVIGDREVESKAVAVR 608


>gi|311279396|ref|YP_003941627.1| threonyl-tRNA synthetase [Enterobacter cloacae SCF1]
 gi|308748591|gb|ADO48343.1| threonyl-tRNA synthetase [Enterobacter cloacae SCF1]
          Length = 642

 Score =  640 bits (1651), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 295/619 (47%), Positives = 424/619 (68%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D SD +  + S+ IIT +
Sbjct: 4   ITLPDGSQRHYDHAVSPMDVALDIGPGLAKACIAGRVNGELADASDLIEHDASLAIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L ++RHSCAH++  A++ +WP  ++AIGP++++GFYYD D +   + +++  +EK+
Sbjct: 64  DEEGLEILRHSCAHLLGHAIKQLWPNTKMAIGPVVDNGFYYDVDLDHTLTQEDIDALEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+  ++   +K+ +S  +ARE F  + E YKV IL E+I   +   LY   E+ D+CR
Sbjct: 124 MHELAEKNYDVIKKNVSWHEARETFVKRGETYKVSILDENIAHDDKPGLYHHEEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKLMK AGAYWRGDSN  ML RIYGTAW  ++ L  YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLMKTAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF+ L  ++R K+K+  Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHWD+Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWDNYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  FGFEKI
Sbjct: 357 EFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQIRDEVNACIRMVYDMYSTFGFEKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+GSD +WD AE  +   L+      ++ I     LGEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEKRIGSDEMWDRAEADLAVALE------ENNIPFEYQLGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF+LPSR +A YV  ++E+  PVMIHRA+ GS+ERFIGI+ E F 
Sbjct: 471 YDCLDRAWQCGTVQLDFSLPSRLSASYVGENNERQVPVMIHRAILGSMERFIGILTEEFA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+Q +V  IT S  EY  E+   L++  + ++ D RNE I +KIREH+++++
Sbjct: 531 GFFPTWLAPVQVVVMNITDSQSEYVNELTRKLQNAGIRVKADLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++CGDKE     + +R
Sbjct: 591 PYMLVCGDKEVETGKVAVR 609


>gi|254995424|ref|ZP_05277614.1| Threonyl-tRNA synthetase (thrS) [Anaplasma marginale str.
           Mississippi]
          Length = 636

 Score =  640 bits (1651), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 294/640 (45%), Positives = 436/640 (68%), Gaps = 15/640 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
           +I  +FP+ +   F  H TGS+VA ++   +A   VA+ ++G + DL+ P+ ++GS++ +
Sbjct: 3   NITTSFPNKTAAAFHKHVTGSEVASAMFPEIAGSIVALFVDGNLQDLATPISKDGSVDPV 62

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T E    + +IRH  AHIMA AV+ I+P+ ++AIGP IE+GFYYDFD     S  +   I
Sbjct: 63  TIESNTGMDIIRHDAAHIMARAVREIFPDTKLAIGPTIENGFYYDFDLSHSLSEKDFEAI 122

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E+KM +IIA+D  F+++    E+A + FE   E YK+EIL  +P  E +T+Y+ GE+ DL
Sbjct: 123 ERKMADIIAKDERFVREVWPRERAIKFFEDLGEHYKLEILSKVPLGEEITVYKHGEFVDL 182

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH  S   VK F KL K++GAYW GD    ML R+YGTAW++ + L  Y++ ++E+E
Sbjct: 183 CRGPHAPSARYVKAF-KLTKISGAYWLGDQKNKMLQRVYGTAWHSSEALASYIHNMQEAE 241

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRK+A+++  FHI  +  G +FWH KGW I++ +  Y+R K+K   Y E+ TP +LD
Sbjct: 242 KRDHRKIAKDLGWFHIQNEALGQVFWHDKGWVIYRIIEEYIRCKLKKHGYHEVKTPIMLD 301

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW++SGHW+ ++ NMF V+       D +  A+KPMNCP HV +F   ++SY+ELP+R
Sbjct: 302 RKLWEKSGHWEKFKENMFVVE------DDKKELAIKPMNCPCHVQIFKSKIRSYKELPIR 355

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AEFG  +RNEPSGSL+GLMRVRGFTQDDAH+FCT EQ+ +E L+ + L++ +YKDFGF+
Sbjct: 356 MAEFGMCHRNEPSGSLYGLMRVRGFTQDDAHIFCTHEQVRDEVLRFYELLMEVYKDFGFD 415

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + VKLS RPE R+GSD +WD +E  +   ++ +    Q  IN G    EGAFYGPK E+
Sbjct: 416 SVTVKLSDRPENRIGSDEIWDRSEQSLMEPMNAL--GVQYTINKG----EGAFYGPKLEF 469

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            LKD+IGR+WQCGT+Q+DF LP R  A+Y+    +K  PV+IHRA+ G+IERFIGI+IE+
Sbjct: 470 TLKDSIGREWQCGTVQLDFVLPDRLGAYYIGEDGKKHIPVIIHRAILGTIERFIGILIEH 529

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + GN+P WL+P+Q  + T++    EYA+++A +    ++ +E +   E I++KIR+    
Sbjct: 530 YAGNIPAWLAPVQLEILTVSGEVAEYARDLAEMASQENVRVELNAAEENISHKIRKAIFN 589

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           K+PI+ + G  EA +R + +RR+GS  T +++   A+  L
Sbjct: 590 KVPIVWVVGKSEAGDRCVSVRRYGSGETCRMAAGKALKTL 629


>gi|15597940|ref|NP_251434.1| threonyl-tRNA synthetase [Pseudomonas aeruginosa PAO1]
 gi|116050734|ref|YP_790445.1| threonyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218891076|ref|YP_002439942.1| threonyl-tRNA synthetase [Pseudomonas aeruginosa LESB58]
 gi|254241197|ref|ZP_04934519.1| threonyl-tRNA synthetase [Pseudomonas aeruginosa 2192]
 gi|313107813|ref|ZP_07793987.1| threonyl-tRNA synthetase [Pseudomonas aeruginosa 39016]
 gi|22654141|sp|Q9I099|SYT_PSEAE RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|122259859|sp|Q02NP1|SYT_PSEAB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|226701406|sp|B7V188|SYT_PSEA8 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|9948822|gb|AAG06132.1|AE004702_9 threonyl-tRNA synthetase [Pseudomonas aeruginosa PAO1]
 gi|115585955|gb|ABJ11970.1| threonyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126194575|gb|EAZ58638.1| threonyl-tRNA synthetase [Pseudomonas aeruginosa 2192]
 gi|218771301|emb|CAW27066.1| threonyl-tRNA synthetase [Pseudomonas aeruginosa LESB58]
 gi|310880489|gb|EFQ39083.1| threonyl-tRNA synthetase [Pseudomonas aeruginosa 39016]
          Length = 640

 Score =  640 bits (1651), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 288/618 (46%), Positives = 427/618 (69%), Gaps = 15/618 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS ++F    + ++VA+SI   LAK  +A  ++G++ D  D + R+ +++IITP+
Sbjct: 4   ITLPDGSQRSFDHPVSVAEVAQSIGAGLAKATLAGKVDGRLVDACDTIDRDATLQIITPK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A I+++
Sbjct: 64  DEEGLEIIRHSCAHLVGHAVKQLYPTAKMVIGPVIEEGFYYDIFFERPFTPEDMAAIQQR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+E+I +D   +K+     +  ELF+S+ E YK+ +++ +P ++ + LY   E+ D+CRG
Sbjct: 124 MRELIDKDYDVIKKMTPRAEVIELFKSRGEDYKLRLIDDMPDEKAMGLYFHEEYVDMCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +T +  K F+L K++GAYWRGDS    L RIYGTAW  +++L  Y+  +EE+EKRD
Sbjct: 184 PHVPNT-RFLKAFQLTKISGAYWRGDSKNEQLQRIYGTAWADKKQLAAYIQRIEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHL 304
           HR++ +++DLFH+ E+  G++FWH  GW ++Q L  YMR+  +D  Y E+ TPQV+D+ L
Sbjct: 243 HRRIGKQLDLFHLQEEAPGMVFWHPNGWSVYQVLEQYMRKVQRDHGYVEVRTPQVVDRIL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHW +Y  NMF       T  + R +A+KPMNCP HV +FN GLKSYR+LP+RLAE
Sbjct: 303 WERSGHWSNYAENMFT------TSSESRDYAVKPMNCPCHVQIFNQGLKSYRDLPLRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FG+ +RNEPSG+LHG+MRVRGFTQDDAH+FCT+EQ+  E      L + +Y+DFGF  I 
Sbjct: 357 FGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEEQVKKEAADFIKLTLQVYRDFGFTDIA 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +KLSTRP KRVGSD LWD AE  +   L+      +  +      GEGAFYGPK E+ LK
Sbjct: 417 MKLSTRPAKRVGSDELWDRAEGALADALN------ESGLAWEYQPGEGAFYGPKIEFTLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D +GR+WQCGT+Q D NLP R +A Y+   + +  PVM+HRA+ GS ERFIG++IE++ G
Sbjct: 471 DCLGRNWQCGTLQYDPNLPERLDASYIAEDNNRKRPVMLHRAILGSFERFIGMLIEHYAG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P WL+P QA+V  IT    ++A E+  +L       ++D RNE I +KIREH++ K+P
Sbjct: 531 AFPAWLAPTQAVVMNITDKQADFAAEVVRILGESGFRAKSDLRNEKIGFKIREHTLLKVP 590

Query: 605 IIIICGDKEASERSIGIR 622
            +++ GD+E   +++ +R
Sbjct: 591 YLLVIGDREVESKAVAVR 608


>gi|206580341|ref|YP_002237974.1| threonyl-tRNA synthetase [Klebsiella pneumoniae 342]
 gi|288934884|ref|YP_003438943.1| threonyl-tRNA synthetase [Klebsiella variicola At-22]
 gi|290509026|ref|ZP_06548397.1| threonyl-tRNA synthetase [Klebsiella sp. 1_1_55]
 gi|238065116|sp|B5XQC6|SYT_KLEP3 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|206569399|gb|ACI11175.1| threonyl-tRNA synthetase [Klebsiella pneumoniae 342]
 gi|288889593|gb|ADC57911.1| threonyl-tRNA synthetase [Klebsiella variicola At-22]
 gi|289778420|gb|EFD86417.1| threonyl-tRNA synthetase [Klebsiella sp. 1_1_55]
          Length = 642

 Score =  640 bits (1650), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 293/619 (47%), Positives = 423/619 (68%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS ++F    +  DVA  I   LAK  +A  +NG++ D  DP+  + ++ IIT +
Sbjct: 4   ITLPDGSQRHFDHAVSPMDVALDIGPGLAKATIAGRVNGELVDACDPIETDSTLSIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ +WP  ++AIGP++++GFYYD D +   + +++  +EK+
Sbjct: 64  DEEGLEIIRHSCAHLLGHAIKQLWPNTKMAIGPVVDNGFYYDVDLDHTLTQEDIDALEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+  ++   +K+ +S  +ARE F  + E YKV IL E+I   +   LY   E+ D+CR
Sbjct: 124 MHELAEKNYDVIKKKVSWHEARETFVKRGETYKVSILDENIAHDDKPGLYHHEEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKLMK AGAYWRGDSN  ML RIYGTAW  ++ L  YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLMKTAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF+ L +++R K+K+  Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELETFVRSKLKEYQYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHWD+Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWDNYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT++Q+ +E      ++  +Y  FGFEKI
Sbjct: 357 EFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEDQVRDEVNACIRMVYDMYSTFGFEKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+GSD  WD AE  +   L+      ++ I     LGEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEKRIGSDETWDRAEADLAVALE------ENNIPFEYQLGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF+LP R +A YV  ++E+  PVMIHRA+ GS+ERFIGI+ E F 
Sbjct: 471 YDCLDRAWQCGTVQLDFSLPQRLSASYVGENNERQVPVMIHRAILGSLERFIGILTEEFA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P W++P+Q +V  IT S  EY  E+   L++  + ++ D RNE I +KIREH+++++
Sbjct: 531 GFFPTWIAPVQVVVMNITDSQAEYVNELTRKLQNAGIRVKADLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++CGDKE     + +R
Sbjct: 591 PYMLVCGDKEVEAGKVAVR 609


>gi|16760562|ref|NP_456179.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|29141677|ref|NP_805019.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|167552305|ref|ZP_02346058.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|168239001|ref|ZP_02664059.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|168821978|ref|ZP_02833978.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|194736705|ref|YP_002114350.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|197251550|ref|YP_002146704.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|200390235|ref|ZP_03216846.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|204927743|ref|ZP_03218944.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|213423451|ref|ZP_03356434.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E01-6750]
 gi|213426331|ref|ZP_03359081.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E02-1180]
 gi|213852224|ref|ZP_03381756.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
 gi|238910851|ref|ZP_04654688.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Tennessee str. CDC07-0191]
 gi|22654121|sp|Q8Z6I2|SYT_SALTI RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|238690055|sp|B5F7G2|SYT_SALA4 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|238693694|sp|B4TUF0|SYT_SALSV RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|25292951|pir||AC0706 threonine-tRNA ligase (EC 6.1.1.3) - Salmonella enterica subsp.
           enterica serovar Typhi (strain CT18)
 gi|16502858|emb|CAD02020.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29137305|gb|AAO68868.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|194712207|gb|ACF91428.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|197215253|gb|ACH52650.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197288252|gb|EDY27637.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|199602680|gb|EDZ01226.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|204323085|gb|EDZ08281.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|205323017|gb|EDZ10856.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|205341550|gb|EDZ28314.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|320086187|emb|CBY95961.1| Threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. 2007-60-3289-1]
 gi|322620023|gb|EFY16896.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-1]
 gi|322622333|gb|EFY19178.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-3]
 gi|322627857|gb|EFY24647.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-4]
 gi|322633045|gb|EFY29788.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-1]
 gi|322636709|gb|EFY33412.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-2]
 gi|322641265|gb|EFY37906.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 531954]
 gi|322645254|gb|EFY41783.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. NC_MB110209-0054]
 gi|322650195|gb|EFY46609.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. OH_2009072675]
 gi|322655769|gb|EFY52071.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. CASC_09SCPH15965]
 gi|322660095|gb|EFY56334.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 19N]
 gi|322665338|gb|EFY61526.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 81038-01]
 gi|322669596|gb|EFY65744.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MD_MDA09249507]
 gi|322673522|gb|EFY69624.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 414877]
 gi|322677448|gb|EFY73512.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 366867]
 gi|322679887|gb|EFY75926.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 413180]
 gi|322687359|gb|EFY83331.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 446600]
 gi|323192477|gb|EFZ77707.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609458-1]
 gi|323198668|gb|EFZ83769.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556150-1]
 gi|323204096|gb|EFZ89110.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609460]
 gi|323208715|gb|EFZ93653.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 507440-20]
 gi|323210228|gb|EFZ95127.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556152]
 gi|323217691|gb|EGA02406.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB101509-0077]
 gi|323220245|gb|EGA04700.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB102109-0047]
 gi|323223489|gb|EGA07815.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB110209-0055]
 gi|323229493|gb|EGA13616.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB111609-0052]
 gi|323232716|gb|EGA16812.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009083312]
 gi|323240245|gb|EGA24289.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009085258]
 gi|323242767|gb|EGA26788.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315731156]
 gi|323249083|gb|EGA33002.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2009159199]
 gi|323254416|gb|EGA38233.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008282]
 gi|323255600|gb|EGA39356.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008283]
 gi|323260123|gb|EGA43748.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008284]
 gi|323267113|gb|EGA50598.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008285]
 gi|323271563|gb|EGA54984.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008287]
          Length = 642

 Score =  640 bits (1650), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 298/641 (46%), Positives = 432/641 (67%), Gaps = 16/641 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D SD +  + ++ IIT +
Sbjct: 4   ITLPDGSQRHYDHPVSPMDVALDIGPGLAKATIAGRVNGELVDASDLIENDATLSIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ +WP  ++AIGP++++GFYYD D ++  + +++  +EK+
Sbjct: 64  DEEGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVVDNGFYYDVDLDRTLTQEDVEALEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+  ++   +K+ +S  +ARE F  + E+YKV IL E+I   +   LY   E+ D+CR
Sbjct: 124 MHELAEKNYDVIKKKVSWHEARETFVKRGESYKVSILDENIAHDDKPGLYHHEEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKLMK AGAYWRGDSN  ML RIYGTAW  ++ L  YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLMKTAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF+ L  ++R K+K+  Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHWD+Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWDNYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  FGFEKI
Sbjct: 357 EFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQIRDEVNACIRMVYDMYSTFGFEKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRP+KR+GSD +WD AE  +   L+      ++ I     LGEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPDKRIGSDEMWDRAEADLAVALE------ENNIPFEYQLGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF+LPSR +A YV   +E+  PVMIHRA+ GS+ERFIGI+ E F 
Sbjct: 471 YDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+Q +V  IT S  EY  E+   L++  + ++ D RNE I +KIREH+++++
Sbjct: 531 GFFPTWLAPVQVVVMNITDSQSEYVNELTQKLQNAGIRVKADLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P +++CGDKE     + +R         + + D I  L +E
Sbjct: 591 PYMLVCGDKEVEAGKVAVRTRRGKDLGSLDVNDVIEKLQQE 631


>gi|222475619|ref|YP_002564036.1| Threonyl-tRNA synthetase (thrS) [Anaplasma marginale str. Florida]
 gi|255003612|ref|ZP_05278576.1| Threonyl-tRNA synthetase (thrS) [Anaplasma marginale str. Puerto
           Rico]
 gi|254783506|sp|B9KH76|SYT_ANAMF RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|222419757|gb|ACM49780.1| Threonyl-tRNA synthetase (thrS) [Anaplasma marginale str. Florida]
          Length = 636

 Score =  640 bits (1650), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 295/640 (46%), Positives = 436/640 (68%), Gaps = 15/640 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
           +I  +FP+ +   F  H TGS+VA ++   +A   VA+ ++G + DL+ P+ ++GS++ +
Sbjct: 3   NITTSFPNKTAAAFHKHVTGSEVASAMFPEIAGSIVALFVDGNLQDLATPISKDGSVDPV 62

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T E    + +IRH  AHIMA AV+ I+P+ ++AIGP IE+GFYYDFD     S  +   I
Sbjct: 63  TIESNTGMDIIRHDAAHIMARAVREIFPDTKLAIGPTIENGFYYDFDLSHSLSEKDFEAI 122

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E+KM +IIA+D  F+++    E+A + FE   E YK+EIL  +P  E +T+Y+ GE+ DL
Sbjct: 123 ERKMSDIIAKDERFVREVWPRERAIKFFEDLGEHYKLEILSKVPLGEEITVYKHGEFVDL 182

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH  S   VK F KL K++GAYW GD    ML R+YGTAW++ + L  Y++ ++E+E
Sbjct: 183 CRGPHAPSARYVKAF-KLTKISGAYWLGDQKNKMLQRVYGTAWHSSEALASYIHNMQEAE 241

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRK+A+++  FHI  +  G +FWH KGW I++ +  Y+R K+K   Y E+ TP +LD
Sbjct: 242 KRDHRKIAKDLGWFHIQNEALGQVFWHDKGWVIYRIIEEYIRCKLKKHGYLEVKTPIMLD 301

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW++SGHW+ ++ NMF V+       D +  A+KPMNCP HV +F   ++SY+ELP+R
Sbjct: 302 RKLWEKSGHWEKFKENMFVVE------DDKKELAIKPMNCPCHVQIFKSKIRSYKELPIR 355

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AEFG  +RNEPSGSL+GLMRVRGFTQDDAH+FCT EQ+ +E L+ + L++ +YKDFGF+
Sbjct: 356 MAEFGMCHRNEPSGSLYGLMRVRGFTQDDAHIFCTHEQVRDEVLRFYELLMEVYKDFGFD 415

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + VKLS RPE R+GSD +WD +E  +   ++ +    Q  IN G    EGAFYGPK E+
Sbjct: 416 SVTVKLSDRPENRIGSDEIWDRSEQSLMEPMNAL--GVQYTINKG----EGAFYGPKLEF 469

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            LKD+IGR+WQCGT+Q+DF LP R  A+Y+    +K  PV+IHRAV G+IERFIGI+IE+
Sbjct: 470 TLKDSIGREWQCGTVQLDFVLPDRLGAYYIGEDGKKHIPVIIHRAVLGTIERFIGILIEH 529

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + GN+P WL+P+Q  + T++    EYA+++A +    ++ +E +   E I++KIR+    
Sbjct: 530 YAGNIPAWLAPVQLEILTVSGEVAEYARDLAEMASQENVRVELNAAEENISHKIRKAIFN 589

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           K+PI+ + G  EA +R + +RR+GS  T +++   A+  L
Sbjct: 590 KVPIVWVVGKSEAGDRCVSVRRYGSGETCRMAAGKALKTL 629


>gi|255004741|ref|ZP_05279542.1| Threonyl-tRNA synthetase (thrS) [Anaplasma marginale str. Virginia]
          Length = 636

 Score =  640 bits (1650), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 295/640 (46%), Positives = 436/640 (68%), Gaps = 15/640 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
           +I  +FP+ +   F  H TGS+VA ++   +A   VA+ ++G + DL+ P+ ++GS++ +
Sbjct: 3   NITTSFPNKTAAAFHKHVTGSEVASAMFPEIAGSIVALFVDGNLQDLATPISKDGSVDPV 62

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T E    + +IRH  AHIMA AV+ I+P+ ++AIGP IE+GFYYDFD     S  +   I
Sbjct: 63  TIESNTGMDIIRHDAAHIMARAVREIFPDTKLAIGPTIENGFYYDFDLSHSLSEKDFEAI 122

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E+KM +IIA+D  F+++    E+A + FE   E YK+EIL  +P  E +T+Y+ GE+ DL
Sbjct: 123 ERKMADIIAKDERFVREVWPRERAIKFFEDLGEHYKLEILSKVPLGEEITVYKHGEFVDL 182

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH  S   VK F KL K++GAYW GD    ML R+YGTAW++ + L  Y++ ++E+E
Sbjct: 183 CRGPHAPSARYVKAF-KLTKISGAYWLGDQKNKMLQRVYGTAWHSSEALASYIHNMQEAE 241

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRK+A+++  FHI  +  G +FWH KGW I++ +  Y+R K+K   Y E+ TP +LD
Sbjct: 242 KRDHRKIAKDLGWFHIQNEALGQVFWHDKGWVIYRIIEEYIRCKLKKHGYLEVKTPIMLD 301

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW++SGHW+ ++ NMF V+       D +  A+KPMNCP HV +F   ++SY+ELP+R
Sbjct: 302 RKLWEKSGHWEKFKENMFVVE------DDKKELAIKPMNCPCHVQIFKSKIRSYKELPIR 355

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AEFG  +RNEPSGSL+GLMRVRGFTQDDAH+FCT EQ+ +E L+ + L++ +YKDFGF+
Sbjct: 356 MAEFGMCHRNEPSGSLYGLMRVRGFTQDDAHIFCTHEQVRDEVLRFYELLMEVYKDFGFD 415

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + VKLS RPE R+GSD +WD +E  +   ++ +    Q  IN G    EGAFYGPK E+
Sbjct: 416 SVTVKLSDRPENRIGSDEIWDRSEQSLMEPMNAL--GVQYTINKG----EGAFYGPKLEF 469

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            LKD+IGR+WQCGT+Q+DF LP R  A+Y+    +K  PV+IHRAV G+IERFIGI+IE+
Sbjct: 470 TLKDSIGREWQCGTVQLDFVLPDRLGAYYIGEDGKKHIPVIIHRAVLGTIERFIGILIEH 529

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + GN+P WL+P+Q  + T++    EYA+++A +    ++ +E +   E I++KIR+    
Sbjct: 530 YAGNIPAWLAPVQLEILTVSGEVAEYARDLAEMASQENVRVELNAAEENISHKIRKAIFN 589

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           K+PI+ + G  EA +R + +RR+GS  T +++   A+  L
Sbjct: 590 KVPIVWVVGKSEAGDRCVSVRRYGSGETCRMAAGKALKTL 629


>gi|312961943|ref|ZP_07776440.1| Threonyl-tRNA synthetase [Pseudomonas fluorescens WH6]
 gi|311283753|gb|EFQ62337.1| Threonyl-tRNA synthetase [Pseudomonas fluorescens WH6]
          Length = 640

 Score =  640 bits (1650), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 296/642 (46%), Positives = 435/642 (67%), Gaps = 24/642 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP+   +T PDGS ++F    + ++VA SI   LAK  VA  ++GK+ D SD +  + S+
Sbjct: 1   MPT---ITLPDGSQRSFDHAVSVAEVAASIGAGLAKATVAGKVDGKLVDASDLITSDASL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           +IITP+D   L +IRHSCAH++  AV+ ++P  ++ IGP+I++GFYYD   E+PF+ D+L
Sbjct: 58  QIITPKDQEGLEIIRHSCAHLIGHAVKQLYPTAKMVIGPVIDEGFYYDIAYERPFTPDDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A IE++M  +I +D   +K+     +  ++F ++ E YK+ ++E +P ++ + LY   E+
Sbjct: 118 AAIEQRMHALIEKDYDVIKKVTPRAEVIDVFTARGEDYKLRLVEDMPDEQAMGLYYHEEY 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            D+CRGPHV +T +  K FKL K++GAYWRGD+    L RIYGTAW  +++L  Y+  +E
Sbjct: 178 VDMCRGPHVPNT-RFLKSFKLTKLSGAYWRGDAKNEQLQRIYGTAWADKKQLAAYIQRIE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQ 298
           E+EKRDHRK+ + ++LFH+ E+  G++FWH  GW ++Q L  YMR+  +++ Y EI TPQ
Sbjct: 237 EAEKRDHRKIGKRLNLFHLQEEAPGMVFWHPNGWTLYQVLEQYMRKVQRENGYLEIKTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHW +Y  NMF  +  +      R +A+KPMNCP HV VFN GLKSYREL
Sbjct: 297 VVDRSLWEKSGHWANYADNMFTTQSEN------RDYAIKPMNCPCHVQVFNQGLKSYREL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFG+ +RNEPSG+LHG+MRVRGFTQDDAH+FCT+EQM  E      L + +Y+DF
Sbjct: 351 PMRLAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEEQMQAESAAFIKLTMDVYRDF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF ++ +KLSTRPEKRVGSD LWD      +             +   +  GEGAFYGPK
Sbjct: 411 GFTEVEMKLSTRPEKRVGSDELWD------RAEAALAAALDSAGLAYDLQPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD +GR WQCGT+Q+DFNLP R  A YV+  + + HPVM+HRA+ GS ERF+GI+
Sbjct: 465 IEFSLKDCLGRVWQCGTLQLDFNLPIRLGAEYVSEDNSRKHPVMLHRAILGSFERFVGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+++G  P WL+P QA++  IT    ++A E+   L       ++D RNE I +KIREH
Sbjct: 525 IEHYEGAFPAWLAPTQAVIMNITDKQADFAAEVEKTLNESGFRAKSDLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
           ++ K+P +++ GD+E   +++ +R      T++ + L ++P+
Sbjct: 585 TLLKVPYLLVIGDREVEMQTVAVR------TREGADLGSMPV 620


>gi|262374306|ref|ZP_06067582.1| threonyl-tRNA synthetase [Acinetobacter junii SH205]
 gi|262310864|gb|EEY91952.1| threonyl-tRNA synthetase [Acinetobacter junii SH205]
          Length = 640

 Score =  640 bits (1650), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 305/642 (47%), Positives = 433/642 (67%), Gaps = 16/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPE 65
           +T P+G  K F    +  ++A+SI   LAK  VA  IN ++ D  D + E  +++IITP+
Sbjct: 4   ITLPNGDQKQFDHPISVMELAQSIGPGLAKNTVAGRINDRLVDACDLITEDATVQIITPK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  AV+ ++PE ++ IGP+IE+GFYYD    +PF+ D++A IE++
Sbjct: 64  DEEGLVIIRHSCAHLVGHAVKQLFPEAKMVIGPVIEEGFYYDIWMPRPFTLDDMAAIEER 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+++I +D   +K+    ++    F ++ E YK+ ++  +P +  + LY   ++ D+CRG
Sbjct: 124 MKKLIDQDYDVIKKMTPRDEVIAEFTARGEEYKLRLIADMPNETQMGLYYHQDYLDMCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +T  +K F KL K++GAYWRGD+    L RIYGTAW  +++L  Y+  +EE+EKRD
Sbjct: 184 PHVPNTKFLKSF-KLTKISGAYWRGDAKNEQLQRIYGTAWADKKQLAAYIKRIEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHL 304
           HRK+ + +DLFH+ E+  G++FWH  GW I+Q L  YMR+  +D+ Y+EI TPQ++D  L
Sbjct: 243 HRKIGKALDLFHMQEEAPGMVFWHANGWTIYQVLEQYMRKVQQDNGYQEIKTPQIVDFTL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGH  +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYR+LP+RLAE
Sbjct: 303 WEKSGHAANYAENMFT------THSESRNYAVKPMNCPCHVQVFNQGLKSYRDLPIRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNEPSGSLHG+MRVRGFTQDDAH+FCTKEQ+  E      L + +YKDFGFE++ 
Sbjct: 357 FGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTKEQIGKEVADFIKLTLDVYKDFGFEEVQ 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +KLSTRPEKRVG DALWD AE  +   LD         +   +  GEGAFYGPK E+ LK
Sbjct: 417 MKLSTRPEKRVGDDALWDLAEKSLADALDDAG------LAWDLQPGEGAFYGPKIEFSLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D +GR WQCGTIQ DFNLP R +A YV   +E+  PVM+HRA+ GS ERFIGI+IE++ G
Sbjct: 471 DCLGRVWQCGTIQCDFNLPIRLDASYVTEENERDQPVMLHRAILGSFERFIGILIEHYAG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
            +P WL+P+QA V  IT S  E ++++   LK + L   +D RNE I +KIRE ++++IP
Sbjct: 531 FMPPWLAPVQACVMNITDSQAEASEQVVAKLKENGLRAISDLRNEKIGFKIRERTLERIP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
            +++ GD+E  E ++ +R         +S +DA   L K ++
Sbjct: 591 YLLVLGDREVEEGTVNVRTRSGKNLGTMS-VDAFIDLVKSAV 631


>gi|323968488|gb|EGB63894.1| threonyl-tRNA synthetase [Escherichia coli M863]
          Length = 642

 Score =  640 bits (1650), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 296/619 (47%), Positives = 424/619 (68%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D  D +  +  + IIT +
Sbjct: 4   ITLPDGSQRHYDHAVSPMDVALDIGPGLAKACIAGRVNGELVDACDLIENDAQLSIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ +WP  ++AIGP+I++GFYYD D ++  + +++  +EK+
Sbjct: 64  DEEGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVIDNGFYYDVDLDRTLTQEDVEALEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+  ++   +K+ +S  +ARE F ++ E+YKV IL E+I   +   LY   E+ D+CR
Sbjct: 124 MHELAEKNYDVIKKKVSWHEARETFANRGESYKVSILDENIAHDDKPGLYFHEEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKLMK AGAYWRGDSN  ML RIYGTAW  ++ L  YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLMKTAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF+ L  ++R K+K+  Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHWD+Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWDNYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+ +E      L+  +Y  FGFEKI
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+GSD +WD AE  +   L+      ++ I     LGEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEKRIGSDEMWDRAEADLAVALE------ENNIPFEYQLGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF+LPSR +A YV   +E+  PVMIHRA+ GS+ERFIGI+ E F 
Sbjct: 471 YDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P+WL+P+Q ++  IT S  EY  E+   L +  + ++ D RNE I +KIREH+++++
Sbjct: 531 GFFPIWLAPVQVVIMNITDSQSEYVNELTQKLSNAGIRVKADLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++CGDKE     + +R
Sbjct: 591 PYMLVCGDKEVESGKVAVR 609


>gi|262281009|ref|ZP_06058792.1| threonyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
 gi|262257909|gb|EEY76644.1| threonyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
          Length = 640

 Score =  639 bits (1649), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 306/642 (47%), Positives = 432/642 (67%), Gaps = 16/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPE 65
           +T P+G  KNF    +  +VA+SI   LAK  VA  +N ++ D  D + E S ++IITP+
Sbjct: 4   ITLPNGDQKNFDHAVSVMEVAQSIGPGLAKNTVAGRVNDRLVDACDLITEDSTLQIITPK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  AV+ ++PE ++ IGP+IE+GFYYD    +PF+ D++A +E++
Sbjct: 64  DEEGLEIIRHSCAHLVGHAVKQLFPEAKMVIGPVIEEGFYYDIWMPRPFTLDDMAAVEER 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+++I +D   +K+    ++    F ++ E YK+ ++  +P +  + LY   ++ D+CRG
Sbjct: 124 MKKLIDQDYDVVKKMTPRDEVIAEFTARGEEYKLRLIADMPEETQMGLYYHQDYLDMCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +T  +K F KL K++GAYWRGD+    L RIYGTAW  +++L  Y+  +EE+EKRD
Sbjct: 184 PHVPNTKFLKSF-KLTKISGAYWRGDAKNEQLQRIYGTAWADKKQLAAYIKRIEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHL 304
           HRK+ + +DLFH+ E+  G++FWH  GW I+Q L  YMR+  +D+ Y EI TPQ++D  L
Sbjct: 243 HRKIGKALDLFHMQEEAPGMVFWHPNGWTIYQVLEQYMRKVQQDNGYLEIKTPQIVDFTL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGH  +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYR+LP+RLAE
Sbjct: 303 WEKSGHAANYADNMFT------THSESRNYAVKPMNCPCHVQVFNQGLKSYRDLPIRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNEPSGSLHG+MRVRGFTQDDAH+FCTKEQ+  E      L + +YKDFGFE++ 
Sbjct: 357 FGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTKEQIGQEVADFIKLTLDVYKDFGFEEVQ 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +KLSTRPEKRVG DALWD AE  +   LD         +   +  GEGAFYGPK E+ LK
Sbjct: 417 MKLSTRPEKRVGDDALWDMAEKSLADALDAAG------LEWELQPGEGAFYGPKIEFSLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D +GR WQCGTIQ DFNLP R +A YV   +++  PVM+HRA+ GS ERFIGI+IE++ G
Sbjct: 471 DCLGRVWQCGTIQCDFNLPERLDASYVTEDNDRDQPVMLHRAILGSFERFIGILIEHYAG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
            +P WLSP+QA V  IT S  E  +++   LK + L   +D RNE I +KIRE ++++IP
Sbjct: 531 FMPPWLSPLQACVMNITDSQAEACEKVVAKLKENGLRAISDLRNEKIGFKIRERTLERIP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
            +++ GD+E  E ++ +R         +S +DA   L K ++
Sbjct: 591 YLLVLGDREVEEGTVNVRTRSGKNLGTMS-VDAFIDLVKSAV 631


>gi|117621181|ref|YP_856850.1| threonyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
 gi|166223316|sp|A0KKP9|SYT_AERHH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|117562588|gb|ABK39536.1| threonyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
          Length = 642

 Score =  639 bits (1649), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 300/643 (46%), Positives = 430/643 (66%), Gaps = 20/643 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  DVA  I   LAK  +A  +NG++ D  + +  + S+ IIT +
Sbjct: 4   ITLPDGSQRQFAHAVSVMDVAADIGPGLAKACIAGRVNGELVDACELIEADASLAIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L ++RHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D ++  + ++LA +E++
Sbjct: 64  DEEGLDILRHSCAHLLGHAIKQLWPQTKMAIGPVIDNGFYYDIDLDRTLTDEDLAALEER 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M  + A+D   +K+ +S ++AR++FE++ E YKVEIL ++I   +   LY   E+ D+CR
Sbjct: 124 MLALAAKDYDVIKKKVSWQEARDVFEARGETYKVEILDQNIARDDQPGLYHHEEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +      F KL K++GAYWRGDSN  ML RIYGTAW  +++L  YL  LEE+ KR
Sbjct: 184 GPHVPNMRHCHHF-KLQKMSGAYWRGDSNNKMLQRIYGTAWADKKQLKSYLQRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF+ L +++R K+K+ DY+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELETFIRGKLKEYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SGHW+ Y   MF  +  +      R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWERSGHWEKYAQAMFTTQSEN------REYAIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+  E      ++  +Y  FGFE I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIMEEVSACIRMVYDVYGTFGFENI 416

Query: 424 MVKLSTRPEKRVGSDALWD--DAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
           +VKLSTRPE+R+GSD  WD  +A      VL+ +K   Q         GEGAFYGPK E+
Sbjct: 417 VVKLSTRPEQRIGSDEAWDRAEAALAEALVLNGLKYDLQP--------GEGAFYGPKIEF 468

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L D + R WQCGT+Q+DF LP R  A YV   +E+  PVMIHRA+ GS+ERFIGI+ E 
Sbjct: 469 TLHDCLDRAWQCGTVQLDFALPGRLGATYVGEDNERHVPVMIHRAILGSLERFIGILTEE 528

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  P WL+P QA+V  IT +  +YA ++A  L    L  + D RNE I +KIREH++K
Sbjct: 529 YAGLFPTWLAPTQAVVMNITDNQADYAVKVAKALNDAGLRAKADLRNEKIGFKIREHTLK 588

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           ++P +++CGDKE     I +R           + + I +LT+E
Sbjct: 589 RVPFMLVCGDKEVEAGKIAVRTRKGADLGTYPVEELIALLTQE 631


>gi|168233251|ref|ZP_02658309.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|194472380|ref|ZP_03078364.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194458744|gb|EDX47583.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|205332671|gb|EDZ19435.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
          Length = 642

 Score =  639 bits (1649), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 298/641 (46%), Positives = 432/641 (67%), Gaps = 16/641 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D SD +  + ++ IIT +
Sbjct: 4   ITLPDGSQRHYDHPVSPMDVALDIGPGLAKATIAGRVNGELVDASDLIENDATLSIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ +WP  ++AIGP++++GFYYD D ++  + +++  +EK+
Sbjct: 64  DEEGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVVDNGFYYDVDLDRTLTQEDVEALEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+  ++   +K+ +S  +ARE F  + E+YKV IL E+I   +   LY   E+ D+CR
Sbjct: 124 MHELAEKNYDVIKKKVSWHEARETFVKRGESYKVAILDENIAHDDKPGLYHHEEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKLMK AGAYWRGDSN  ML RIYGTAW  ++ L  YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLMKTAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF+ L  ++R K+K+  Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHWD+Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWDNYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  FGFEKI
Sbjct: 357 EFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQIRDEVNACIRMVYDMYSTFGFEKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRP+KR+GSD +WD AE  +   L+      ++ I     LGEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPDKRIGSDEMWDRAEADLAVALE------ENNIPFEYQLGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF+LPSR +A YV   +E+  PVMIHRA+ GS+ERFIGI+ E F 
Sbjct: 471 YDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+Q +V  IT S  EY  E+   L++  + ++ D RNE I +KIREH+++++
Sbjct: 531 GFFPTWLAPVQVVVMNITDSQSEYVNELTQKLQNAGIRVKADLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P +++CGDKE     + +R         + + D I  L +E
Sbjct: 591 PYMLVCGDKEVEAGKVAVRTRRGKDLGSLDVNDVIEKLQQE 631


>gi|324119204|gb|EGC13092.1| threonyl-tRNA synthetase [Escherichia coli E1167]
          Length = 642

 Score =  639 bits (1649), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 297/619 (47%), Positives = 424/619 (68%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D  D +  +  + IIT +
Sbjct: 4   ITLPDGSQRHYDHAVSPMDVALDIGPGLAKACIAGRVNGELVDACDLIENDAQLSIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D  SL +IRHSCAH++  A++ +WP  ++AIGP+I++GFYYD D ++  + +++  +EK+
Sbjct: 64  DEDSLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVIDNGFYYDVDLDRTLTQEDVEALEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+  ++   +K+ +S  +ARE F ++ E+YKV IL E+I   +   LY   E+ D+CR
Sbjct: 124 MHELAEKNYDVIKKKVSWHEARETFANRGESYKVSILDENIAHDDKPGLYFHEEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKLMK AGAYWRGDSN  ML RIYGTAW  ++ L  YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLMKTAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF+ L  ++R K+K+  Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHWD+Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWDNYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+ +E      L+  +Y  FGFEKI
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+GSD +WD AE  +   L+      ++ I     LGEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEKRIGSDEMWDRAEADLAVALE------ENNIPFEYQLGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF+LPSR +A YV   +E+  PVMIHRA+ GS+ERFIGI+ E F 
Sbjct: 471 YDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+Q ++  IT S  EY  E+   L +  + ++ D RNE I +KIREH+++++
Sbjct: 531 GFFPTWLAPVQVVIMNITDSQSEYVNELTQKLSNAGIRVKADLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++CGDKE     + +R
Sbjct: 591 PYMLVCGDKEVESGKVAVR 609


>gi|262369846|ref|ZP_06063173.1| threonyl-tRNA synthetase [Acinetobacter johnsonii SH046]
 gi|262314885|gb|EEY95925.1| threonyl-tRNA synthetase [Acinetobacter johnsonii SH046]
          Length = 640

 Score =  639 bits (1649), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 306/642 (47%), Positives = 429/642 (66%), Gaps = 16/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T P+G  K F    +  DVA SI   LAK  VA  ++G++ D SD +  + S++IITP+
Sbjct: 4   ITLPNGDQKQFDQAVSVMDVALSIGPGLAKNTVAGKVDGRLVDASDLITTDASLQIITPK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   + +IRHSCAH++  AV+ ++PE ++ IGP+IEDGFYYD    +PF+ +++  IE++
Sbjct: 64  DEEGVEIIRHSCAHLVGHAVKQLFPEAKMVIGPVIEDGFYYDIFSAKPFTPEDMLAIEER 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+++I +D   +K+    ++    F ++ E YK+ ++  +P +  + LY   ++ D+CRG
Sbjct: 124 MKKLIDQDYDVIKKMTPRDEVIAEFTARGEDYKLRLIADMPEETEMGLYYHQDYLDMCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +T +  K FKL K++GAYWRGD+    L RIYGTAW  +++L  Y+  +EE+EKRD
Sbjct: 184 PHVPNT-KFLKAFKLTKMSGAYWRGDAKNEQLQRIYGTAWADKKQLAAYIKRIEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHL 304
           HRK+ + +DLFH+ E+  G++FWH  GW I+Q L  YMR+  +D+ Y EI TPQV+D  L
Sbjct: 243 HRKIGKALDLFHMQEEAPGMVFWHPNGWTIYQVLEQYMRKVQQDNGYLEIRTPQVVDFTL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGH  +Y   MF       T  + R +A+KPMNCP HV VFN GLKSYR+LP+RLAE
Sbjct: 303 WEKSGHAANYADGMFT------THSESRNYAIKPMNCPCHVQVFNQGLKSYRDLPIRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNEPSGSLHG+MRVRGFTQDDAH+FCTKEQ+  E      L + +YKDFGFE + 
Sbjct: 357 FGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTKEQIGQEVADFIQLTLDVYKDFGFEDVQ 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +KLSTRPEKRVG DALWD AE  +   LD         +   +  GEGAFYGPK E+ LK
Sbjct: 417 MKLSTRPEKRVGDDALWDMAEKSLADALDAAG------LEWELQPGEGAFYGPKIEFSLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D +GR WQCGTIQ DFNLP R +A YV   +++  PVM+HRA+ GS ERFIGI+IE++ G
Sbjct: 471 DCLGRVWQCGTIQCDFNLPERLDASYVTEDNDRDQPVMLHRAILGSFERFIGILIEHYAG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
            +P WL+PIQA V  IT S  E  + +   LK + L   +D RNE I +KIRE ++++IP
Sbjct: 531 FMPPWLTPIQACVMNITDSQAEACESVVAKLKENGLRAISDLRNEKIGFKIRERTLERIP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
            +++ GD+E  E ++ +R    T    +S +DA   L K ++
Sbjct: 591 YLLVLGDREVEEGTVNVRTRSGTNLGTMS-IDAFVDLVKAAV 631


>gi|229591579|ref|YP_002873698.1| threonyl-tRNA synthetase [Pseudomonas fluorescens SBW25]
 gi|259516637|sp|C3JZN7|SYT_PSEFS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|229363445|emb|CAY50645.1| putative threonyl-tRNA synthetase [Pseudomonas fluorescens SBW25]
          Length = 640

 Score =  639 bits (1649), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 295/642 (45%), Positives = 435/642 (67%), Gaps = 24/642 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP+   +T PDGS ++F    + ++VA SI   LAK  VA  ++GK+ D SD +  + S+
Sbjct: 1   MPT---ITLPDGSQRSFDHSVSVAEVAASIGAGLAKATVAGKVDGKLVDASDLITNDASL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           +IITP+D   L +IRHSCAH++  AV+ ++P  ++ IGP+I++GFYYD   E+PF+ D++
Sbjct: 58  QIITPKDQEGLEIIRHSCAHLIGHAVKQLYPTAKMVIGPVIDEGFYYDIAYERPFTPDDM 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A IE++M  +I +D   +K+     +  ++F ++ E YK+ ++E +P ++ + LY   E+
Sbjct: 118 AAIEQRMHALIEKDYDVIKKVTPRAEVIDVFTARGEDYKLRLVEDMPDEQAMGLYYHEEY 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            D+CRGPHV +T +  K FKL K++GAYWRGD+    L RIYGTAW  +++L  Y+  +E
Sbjct: 178 VDMCRGPHVPNT-RFLKSFKLTKLSGAYWRGDAKNEQLQRIYGTAWADKKQLAAYIQRIE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQ 298
           E+EKRDHRK+ + ++LFH+ E+  G++FWH  GW ++Q L  YMR+  +++ Y EI TPQ
Sbjct: 237 EAEKRDHRKIGKRLNLFHLQEEAPGMVFWHPNGWTLYQVLEQYMRKVQRENGYLEIKTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHW +Y  NMF  +  +      R +A+KPMNCP HV VFN GLKSYREL
Sbjct: 297 VVDRSLWEKSGHWANYADNMFTTQSEN------RDYAIKPMNCPCHVQVFNQGLKSYREL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFG+ +RNEPSG+LHG+MRVRGFTQDDAH+FCT+EQM  E      L + +Y+DF
Sbjct: 351 PMRLAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEEQMQAESAAFIKLTMDVYRDF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF ++ +KLSTRPEKRVGSD LWD      +             +   +  GEGAFYGPK
Sbjct: 411 GFTEVEMKLSTRPEKRVGSDELWD------RAEAALAAALDSAGLAYDLQPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD +GR WQCGT+Q+DFNLP R  A YV+  + + HPVM+HRA+ GS ERF+GI+
Sbjct: 465 IEFSLKDCLGRVWQCGTLQLDFNLPIRLGAEYVSEDNSRKHPVMLHRAILGSFERFVGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+++G  P WL+P QA++  IT    ++A E+   L       ++D RNE I +KIREH
Sbjct: 525 IEHYEGAFPAWLAPTQAVIMNITDKQADFAAEVEKTLNESGFRAKSDLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
           ++ K+P +++ GD+E   +++ +R      T++ + L ++P+
Sbjct: 585 TLLKVPYLLVIGDREVEMQTVAVR------TREGADLGSMPV 620


>gi|145634324|ref|ZP_01790034.1| threonyl-tRNA synthetase [Haemophilus influenzae PittAA]
 gi|145268304|gb|EDK08298.1| threonyl-tRNA synthetase [Haemophilus influenzae PittAA]
          Length = 643

 Score =  639 bits (1648), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 298/621 (47%), Positives = 426/621 (68%), Gaps = 20/621 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGK---VCDLSDPVREGSIEIIT 63
           +T PDGS + F   A+  +VA+ I   LAK  +A  +NG+    CD+ D  ++ ++EIIT
Sbjct: 4   ITLPDGSQRQFDHPASVLEVAQDIGAGLAKATIAGRVNGERRDACDVID--QDATLEIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   L +IRHSCAH++  A++ ++P+V++AIGP IE+GFYYD D ++  + ++L  IE
Sbjct: 62  AKDEDGLEIIRHSCAHLLGHAIKQLFPDVKMAIGPTIENGFYYDVDLDRSLTQEDLDAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDL 182
           K+M E+   +   +K+ ++ ++AR+ FE + E YK+ IL E+I       LY   E+ D+
Sbjct: 122 KRMLELAKTNYDVVKKRVTWQEARDTFEKRGEPYKMAILDENIERTATPALYHHLEYIDM 181

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +  +  + FKL KVAGAYWRGDS   ML RIYGTAW  +++L +YL  LEE+ 
Sbjct: 182 CRGPHVPNM-RFCQHFKLQKVAGAYWRGDSKNKMLQRIYGTAWADKKQLAEYLTRLEEAA 240

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRK+ + +DL+H+ E+  G++FWH  GW IF+ L +++R K+K  DY+E+  P ++D
Sbjct: 241 KRDHRKIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGPFMMD 300

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+++GHW +Y   MF  +  +      R +A+KPMNCPGHV +FN GLKSYR+LP+R
Sbjct: 301 RVLWEKTGHWQNYADLMFTTQSEN------REYAIKPMNCPGHVQIFNQGLKSYRDLPIR 354

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AEFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+ +E      ++  IY  FGF 
Sbjct: 355 MAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQIESEVTSCIKMVYDIYSTFGFT 414

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            I VKLSTRPE R+GSD +WD AE  +   L  + N  +  I  G    EGAFYGPK E+
Sbjct: 415 NIAVKLSTRPENRIGSDEMWDRAEAGLAAAL--VHNGLEYEIQEG----EGAFYGPKIEF 468

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L+D +GR+WQCGT+Q+DF LP R +A YV   + +  PVMIHRA+ GSIERFIGI+ E 
Sbjct: 469 ALRDCLGREWQCGTVQLDFALPGRLDATYVAEDNSRKTPVMIHRAILGSIERFIGIITEE 528

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  P WL+P QA+V  IT S  +Y Q++A  L    L ++TD RNE + +KIREH+++
Sbjct: 529 YAGFFPAWLAPTQAVVMNITDSQADYVQKVAKQLSDVGLRVKTDLRNEKVGFKIREHTLR 588

Query: 602 KIPIIIICGDKEASERSIGIR 622
           ++P +++CGDKE +E  + +R
Sbjct: 589 RVPYMLVCGDKEIAEGKVAVR 609


>gi|260597637|ref|YP_003210208.1| threonyl-tRNA synthetase [Cronobacter turicensis z3032]
 gi|260216814|emb|CBA30296.1| Threonyl-tRNA synthetase [Cronobacter turicensis z3032]
          Length = 642

 Score =  639 bits (1648), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 297/641 (46%), Positives = 434/641 (67%), Gaps = 16/641 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D +DP+ ++  + IIT +
Sbjct: 4   ITLPDGSQRHYDHAVSPMDVALDIGPGLAKACIAGRVNGELVDANDPIEQDAQLAIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ +WP  ++AIGP+I++GFYYD D +   + +++  +EK+
Sbjct: 64  DEDGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVIDNGFYYDVDLDHTLTQEDIDALEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K+ +S ++ARE F ++ E+YKV IL E+I   +   LY   E+ D+CR
Sbjct: 124 MHELAETNYDVIKKKVSWQEARETFVNRGESYKVAILDENIARDDKPGLYHHEEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKLMK AGAYWRGDS+  ML RIYGTAW  ++ L  YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLMKTAGAYWRGDSSNKMLQRIYGTAWADKKALNAYLQRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF+ L +++R K+K+  Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELETFVRSKLKEYQYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHWD+Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWDNYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSG+LHGLMRVRGFTQDDAHVFCT+EQ+ +E      ++  +Y  FGFEKI
Sbjct: 357 EFGSCHRNEPSGALHGLMRVRGFTQDDAHVFCTEEQVRDEVNSCIRMVYDMYSTFGFEKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+G+D +WD AE  +   L+      ++ I      GEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEKRIGTDEMWDRAEADLAVALE------ENNIPFEYQPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF+LP+R +A YV  ++E+  PVMIHRA+ GS+ERFIGI+ E F 
Sbjct: 471 YDCLDRAWQCGTVQLDFSLPARLSASYVGENNERQVPVMIHRAILGSMERFIGILTEEFA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+Q +V  IT S  EY  E+   L++  + ++ D RNE I +KIREH+++++
Sbjct: 531 GFFPTWLAPVQVVVMNITDSQSEYVNELTRKLQNAGIRVKADLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P +++CGDKE     + +R         + + D I  L +E
Sbjct: 591 PYMLVCGDKEVEAGKVAVRTRRGKDLGSLDVNDVIEKLQQE 631


>gi|15802131|ref|NP_288153.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 EDL933]
 gi|15831680|ref|NP_310453.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
 gi|168762217|ref|ZP_02787224.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4501]
 gi|168788115|ref|ZP_02813122.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC869]
 gi|168800100|ref|ZP_02825107.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC508]
 gi|187776029|ref|ZP_02799987.2| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4196]
 gi|188024843|ref|ZP_02774486.2| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4113]
 gi|189010441|ref|ZP_02807141.2| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4076]
 gi|189402338|ref|ZP_02781727.2| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4401]
 gi|189403439|ref|ZP_02795487.2| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4486]
 gi|208810744|ref|ZP_03252620.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4206]
 gi|208816647|ref|ZP_03257767.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4045]
 gi|209400429|ref|YP_002270789.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4115]
 gi|217328990|ref|ZP_03445071.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14588]
 gi|254793336|ref|YP_003078173.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
 gi|291282899|ref|YP_003499717.1| Threonyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
 gi|22654116|sp|Q8XE27|SYT_ECO57 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|238065112|sp|B5YQ07|SYT_ECO5E RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|12515733|gb|AAG56706.1|AE005395_2 threonine tRNA synthetase [Escherichia coli O157:H7 str. EDL933]
 gi|13361893|dbj|BAB35849.1| threonine tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
 gi|187769425|gb|EDU33269.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4196]
 gi|188016225|gb|EDU54347.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4113]
 gi|189000290|gb|EDU69276.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4076]
 gi|189356196|gb|EDU74615.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4401]
 gi|189360618|gb|EDU79037.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4486]
 gi|189367509|gb|EDU85925.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4501]
 gi|189372060|gb|EDU90476.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC869]
 gi|189377572|gb|EDU95988.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC508]
 gi|208725260|gb|EDZ74967.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4206]
 gi|208730990|gb|EDZ79679.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4045]
 gi|209161829|gb|ACI39262.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4115]
 gi|209768828|gb|ACI82726.1| threonine tRNA synthetase [Escherichia coli]
 gi|209768830|gb|ACI82727.1| threonine tRNA synthetase [Escherichia coli]
 gi|209768832|gb|ACI82728.1| threonine tRNA synthetase [Escherichia coli]
 gi|209768834|gb|ACI82729.1| threonine tRNA synthetase [Escherichia coli]
 gi|209768836|gb|ACI82730.1| threonine tRNA synthetase [Escherichia coli]
 gi|217318337|gb|EEC26764.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14588]
 gi|254592736|gb|ACT72097.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
 gi|290762772|gb|ADD56733.1| Threonyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
 gi|320188406|gb|EFW63068.1| Threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC1212]
 gi|320652208|gb|EFX20506.1| threonyl-tRNA synthetase [Escherichia coli O157:H- str. H 2687]
 gi|320657809|gb|EFX25571.1| threonyl-tRNA synthetase [Escherichia coli O55:H7 str. 3256-97 TW
           07815]
 gi|320658384|gb|EFX26078.1| threonyl-tRNA synthetase [Escherichia coli O55:H7 str. USDA 5905]
 gi|326342086|gb|EGD65867.1| Threonyl-tRNA synthetase [Escherichia coli O157:H7 str. 1044]
 gi|326343638|gb|EGD67400.1| Threonyl-tRNA synthetase [Escherichia coli O157:H7 str. 1125]
          Length = 642

 Score =  639 bits (1648), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 297/619 (47%), Positives = 423/619 (68%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D  D +  +  + IIT +
Sbjct: 4   ITLPDGSQRHYDHAVSPMDVALDIGPGLAKACIAGRVNGELVDACDLIENDAQLSIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ +WP  ++AIGP+I++GFYYD D ++  + +++  +EK+
Sbjct: 64  DEEGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVIDNGFYYDVDLDRTLTQEDVEALEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+  ++   +K+ +S  +ARE F ++ E+YKV IL E+I   +   LY   E+ D+CR
Sbjct: 124 MHELAEKNYDVIKKKVSWHEARETFANRGESYKVSILDENIAHDDKPGLYFHEEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKLMK AGAYWRGDSN  ML RIYGTAW  ++ L  YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLMKTAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF+ L  ++R K+K+  Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHWD+Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWDNYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+ +E      L+  +Y  FGFEKI
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+GSD +WD AE  +   L+      ++ I     LGEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEKRIGSDEMWDRAEADLAVALE------ENNIPFEYQLGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF+LPSR +A YV   +E+  PVMIHRA+ GS+ERFIGI+ E F 
Sbjct: 471 YDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+Q ++  IT S  EY  E+   L +  + ++ D RNE I +KIREH+++++
Sbjct: 531 GFFPTWLAPVQVVIMNITDSQSEYVNELTQKLSNAGIRVKADLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++CGDKE     I +R
Sbjct: 591 PYMLVCGDKEVESGKIAVR 609


>gi|113460987|ref|YP_719054.1| threonyl-tRNA synthetase [Haemophilus somnus 129PT]
 gi|123031343|sp|Q0I3M2|SYT_HAES1 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|112823030|gb|ABI25119.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Haemophilus
           somnus 129PT]
          Length = 642

 Score =  639 bits (1648), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 299/641 (46%), Positives = 436/641 (68%), Gaps = 16/641 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPE 65
           +T PDGS + F    +  +VA+SI   LAK  +A  +NG+  D SD + E  ++EIIT +
Sbjct: 4   ITLPDGSQRQFDNPVSVLEVAQSIGSGLAKATIAGRVNGERRDASDMISEDANLEIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHS AH++  A++ ++P V++AIGP I++GFYYD D ++  + +++  +EK+
Sbjct: 64  DEDGLEIIRHSTAHLLGHAIKQLFPNVKMAIGPTIDNGFYYDIDLDRSLTQEDIDTLEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K+ +S ++AR+ FES+ E YK+ IL E+I   +   LY   E+ D+CR
Sbjct: 124 MLELAKTNYDVIKKRVSWQEARDTFESRAEPYKIAILDENIAKDDQPALYHHEEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKLMKVAGAYWRG+S+  ML RIYGTAW  +++L  YL+ LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLMKVAGAYWRGNSDNKMLQRIYGTAWADKKQLADYLHRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ + +DL+H+ E+  G++FWH  GW IF+ L +++R K+K+ DY+E+  P ++D+ 
Sbjct: 243 DHRKIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW +Y   MF  +  +      R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWERTGHWQNYADLMFTTQSEN------REYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+ +E      ++  IY  FGF  I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQIESEVTSCIKMVYDIYSTFGFTDI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPEKR+G D +WD AE   +G+ + +K++    +   +  GEGAFYGPK E+ L
Sbjct: 417 FVKLSTRPEKRIGEDVMWDRAE---QGLANALKHNG---LEYEIQEGEGAFYGPKIEFAL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D + R+WQCGTIQ+DF LP R +A YV   + +  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 RDCLDREWQCGTIQLDFALPGRLDATYVAEDNARRTPVMIHRAILGSIERFIGIITEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+PIQA+V  IT S  +Y Q++        L ++ D RNE + +KIREH+++++
Sbjct: 531 GFFPTWLAPIQAVVMNITDSQADYVQKVVKQFSEAGLRVKADIRNEKVGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P +++CGDKE  E  I +R    T     S+ + + IL ++
Sbjct: 591 PYMLVCGDKEIVENKIAVRTRKGTDLGTFSVEEFVEILKQQ 631


>gi|240949517|ref|ZP_04753857.1| threonyl-tRNA synthetase [Actinobacillus minor NM305]
 gi|240296090|gb|EER46751.1| threonyl-tRNA synthetase [Actinobacillus minor NM305]
          Length = 643

 Score =  639 bits (1648), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 295/619 (47%), Positives = 428/619 (69%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPE 65
           +T PDGS + F    +  +VA+SI   LAK  +A  +NG+  D SD + E  ++EIIT +
Sbjct: 4   ITLPDGSQRQFDNPVSVMEVAQSIGAGLAKATIAGRVNGERRDASDIISEDATLEIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHS AH++  A++ ++P V++AIGP I++GFYYD D ++  + +++  +EK+
Sbjct: 64  DEDGLEIIRHSTAHLLGHAIKQLFPNVKMAIGPTIDNGFYYDIDLDRSLTQEDIDALEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K+ +S ++AR+ FES+ E YK+ IL E+I   ++  LY   E+ D+CR
Sbjct: 124 MLELAKTNYDVVKKRVSWQEARDTFESRGEPYKMAILDENISKDDSPALYHHEEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKL KVAGAYWRGDS   ML RIYGTAW  +++L  YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLQKVAGAYWRGDSKNKMLQRIYGTAWADKKQLADYLQRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ + +DL+H+ E+  G++FWH  GW IF+ L +++R K+K+ DY+E+  P ++D+ 
Sbjct: 243 DHRKIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW +Y   MF  +  +      R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWERTGHWQNYADLMFTTQSEN------REYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++  IY  FGFE I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIESEVTSCIKMVYDIYSTFGFENI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPE R+G DA+WD AE   +G+ + ++N+    +   +  GEGAFYGPK E+ L
Sbjct: 417 AVKLSTRPENRIGDDAMWDRAE---EGLANALRNNG---LEYEIQEGEGAFYGPKIEFAL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D + R+WQCGT+Q+DF LP R +A YV   + +  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 RDCLDREWQCGTVQLDFALPGRLDASYVAEDNGRRTPVMIHRAILGSIERFIGIITEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+QA+V  IT S  EY Q++   L    L ++ D RNE + +K+REH+++++
Sbjct: 531 GFFPAWLAPVQAVVMNITDSQAEYVQKVVKQLSDAGLRVKADLRNEKVGFKVREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++CGDKE +E  + +R
Sbjct: 591 PYMLVCGDKEIAEGKVSVR 609


>gi|238919782|ref|YP_002933297.1| threonyl-tRNA synthetase [Edwardsiella ictaluri 93-146]
 gi|259516479|sp|C5B846|SYT_EDWI9 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|238869351|gb|ACR69062.1| threonyl-tRNA synthetase, putative [Edwardsiella ictaluri 93-146]
          Length = 642

 Score =  639 bits (1648), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 294/641 (45%), Positives = 437/641 (68%), Gaps = 16/641 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS ++F    +  D+A  I   LAK  +A  +NG++ D  D +  + ++ IIT +
Sbjct: 4   ITLPDGSQRHFDHPVSVMDIARDIGPGLAKACIAGRVNGELVDACDLIDADATVAIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   + ++RHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D +   + ++L +++K+
Sbjct: 64  DQEGVDILRHSCAHLLGHAIKQLWPQTKMAIGPVIDNGFYYDVDLDHTLTQEDLERLDKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+  +D   +K+ +S ++AR+ F ++ E YKV IL E+I   +   LY   E+ D+CR
Sbjct: 124 MHELAEKDYDVIKKKVSWQEARDAFVARDELYKVAILDENISHDDRPGLYHHEEYLDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKL K +GAYWRGDS+  ML RIYGTAW  +++L  YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLQKSSGAYWRGDSDNKMLQRIYGTAWADKKQLNAYLQRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF+ L +++R K+K+  Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEAFVRMKLKEYQYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW++Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWENYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  FGFEKI
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDEVNSCIKMVYDMYSTFGFEKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+GSD +WD AE  +   L       ++ I      GEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEKRIGSDEIWDRAEEDLAAAL------QENGIPFEYQPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF+LP R +A YV  ++E+  PVMIHRA+ GS+ERFIGI+ E F 
Sbjct: 471 HDCLDRAWQCGTVQLDFSLPGRLSASYVGENNERVVPVMIHRAILGSMERFIGILTEEFA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+QA+V  IT S  EY +E++  L++  + +++D RNE I +KIREH+++++
Sbjct: 531 GFFPTWLAPVQAVVMNITDSQAEYVEELSKKLQAAGIRVKSDLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P +++CGDKE     + +R         +S+ D I  L +E
Sbjct: 591 PYMLVCGDKEVEAGKVAVRTRRGKDLGVMSIDDVIKKLQQE 631


>gi|15602458|ref|NP_245530.1| threonyl-tRNA synthetase [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|13431883|sp|P57857|SYT_PASMU RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|12720863|gb|AAK02677.1| ThrS [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 643

 Score =  639 bits (1648), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 302/641 (47%), Positives = 432/641 (67%), Gaps = 16/641 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPE 65
           +T PDGS + F    +  DVA SI   LAK  +A  +NG+  D  D + E S +EIIT +
Sbjct: 4   ITLPDGSQRQFEQPISVMDVAASIGAGLAKACIAGRVNGERKDACDLITEDSKLEIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           +   L +IRHSCAH++  A++ ++P V++AIGP I+ GFYYD D ++  + ++L  +EK+
Sbjct: 64  EEDGLEIIRHSCAHLLGHAIKQLFPNVKMAIGPTIDKGFYYDVDLDRSLTQEDLDALEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K+ +S ++AR+ FE++ E YK+ IL E+I   +   LY   E+ D+CR
Sbjct: 124 MLELAKTNYDVVKKVVSWQEARDTFEARGEPYKMAILDENIDRCDTPALYHHEEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKLMKVAGAYWRGDS   ML RIYGTAW  +++L++YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLMKVAGAYWRGDSKNKMLQRIYGTAWADKKQLSEYLTRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ + +DL+H+ E+  G++FWH  GW IF+ L +++R K+K+ DY+E+  P ++D+ 
Sbjct: 243 DHRKIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW +Y   MF  +  +      R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWQNYGDLMFTTQSEN------REYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+ +E      ++  IY  FGFE I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQIESEVTACIKMVYDIYSTFGFENI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPEKR+G+D +WD AE  +   L      S + +   +  GEGAFYGPK E+ L
Sbjct: 417 QVKLSTRPEKRIGADEMWDRAEAGLAAAL------SHNGLEYEIQEGEGAFYGPKIEFAL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D + R+WQCGTIQ+DF LP R NA YV   +++  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 RDCLDREWQCGTIQLDFALPGRLNASYVAEDNDRRTPVMIHRAILGSIERFIGIITEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P QAIV  IT S  +Y Q++   L    L +++D RNE I +KIREH+++++
Sbjct: 531 GFFPAWLAPTQAIVMNITDSQSDYVQKVVKTLSDAGLRVKSDLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P +++CGDKE     + +R          ++ + + IL K+
Sbjct: 591 PYMLVCGDKEIEAGKVAVRTRKGADLGTFTIEEFLDILKKQ 631


>gi|257464982|ref|ZP_05629353.1| threonyl-tRNA synthetase [Actinobacillus minor 202]
 gi|257450642|gb|EEV24685.1| threonyl-tRNA synthetase [Actinobacillus minor 202]
          Length = 643

 Score =  639 bits (1647), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 295/619 (47%), Positives = 428/619 (69%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPE 65
           +T PDGS + F    +  +VA+SI   LAK  +A  +NG+  D SD + E  ++EIIT +
Sbjct: 4   ITLPDGSQRQFDNPVSVMEVAQSIGAGLAKATIAGRVNGERRDASDIISEDATLEIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHS AH++  A++ ++P V++AIGP I++GFYYD D ++  + +++  +EK+
Sbjct: 64  DEDGLEIIRHSTAHLLGHAIKQLFPNVKMAIGPTIDNGFYYDIDLDRSLTQEDIDALEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K+ +S ++AR+ FES+ E YK+ IL E+I   ++  LY   E+ D+CR
Sbjct: 124 MLELAKTNYDVVKKRVSWQEARDTFESRGEPYKMAILDENISKDDHPALYHHEEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKL KVAGAYWRGDS   ML RIYGTAW  +++L  YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLQKVAGAYWRGDSKNKMLQRIYGTAWADKKQLADYLQRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ + +DL+H+ E+  G++FWH  GW IF+ L +++R K+K+ DY+E+  P ++D+ 
Sbjct: 243 DHRKIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW +Y   MF  +  +      R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWERTGHWQNYADLMFTTQSEN------REYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++  IY  FGFE I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIESEVTSCIKMVYDIYSTFGFENI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPE R+G DA+WD AE   +G+ + ++N+    +   +  GEGAFYGPK E+ L
Sbjct: 417 AVKLSTRPENRIGDDAMWDRAE---EGLANALRNNG---LEYEIQEGEGAFYGPKIEFAL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D + R+WQCGT+Q+DF LP R +A YV   + +  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 RDCLDREWQCGTVQLDFALPGRLDASYVAEDNGRRTPVMIHRAILGSIERFIGIITEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+QA+V  IT S  EY Q++   L    L ++ D RNE + +K+REH+++++
Sbjct: 531 GFFPAWLAPVQAVVMNITDSQAEYVQKVVKQLSDAGLRVKADLRNEKVGFKVREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++CGDKE +E  + +R
Sbjct: 591 PYMLVCGDKEIAEGKVSVR 609


>gi|43066|emb|CAA23560.1| unnamed protein product [Escherichia coli]
          Length = 642

 Score =  639 bits (1647), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 296/619 (47%), Positives = 423/619 (68%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D  D +  +  + IIT +
Sbjct: 4   ITLPDGSQRHYDHAVSPMDVALDIGPGLAKACIAGRVNGELVDACDLIENDAQLSIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ +WP  ++AIGP+I++GFYYD D ++  + +++  +EK+
Sbjct: 64  DEEGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVIDNGFYYDVDLDRTLTQEDVEALEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+  ++   +K+ +S  +ARE F ++ E+YKV IL E+I   +   LY   E+ D+CR
Sbjct: 124 MHELAEKNYDVIKKKVSWHEARETFANRGESYKVSILDENIAHDDKPGLYFHEEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +     +F KLMK AGAYWRGDSN  ML RIYGTAW  ++ L  YL  LEE+ KR
Sbjct: 184 GPHVPNMRFCHRF-KLMKTAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF+ L  ++R K+K+  Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHWD+Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWDNYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+ +E      L+  +Y  FGFEKI
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+GSD +WD AE  +   L+      ++ I     LGEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEKRIGSDEMWDRAEADLAVALE------ENNIPFEYQLGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF+LPSR +A YV   +E+  PVMIHRA+ GS+ERFIGI+ E F 
Sbjct: 471 YDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+Q ++  IT S  EY  E+   L +  + ++ D RNE I +KIREH+++++
Sbjct: 531 GFFPTWLAPVQVVIMNITDSQSEYVNELTQKLSNAGIRVKADLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++CGDKE     + +R
Sbjct: 591 PYMLVCGDKEVESGKVAVR 609


>gi|255320853|ref|ZP_05362027.1| threonyl-tRNA synthetase [Acinetobacter radioresistens SK82]
 gi|262380254|ref|ZP_06073409.1| threonyl-tRNA synthetase [Acinetobacter radioresistens SH164]
 gi|255302022|gb|EET81265.1| threonyl-tRNA synthetase [Acinetobacter radioresistens SK82]
 gi|262298448|gb|EEY86362.1| threonyl-tRNA synthetase [Acinetobacter radioresistens SH164]
          Length = 640

 Score =  639 bits (1647), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 304/639 (47%), Positives = 430/639 (67%), Gaps = 16/639 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPE 65
           +T P+G  K F    +  DVA+SI   LAK  VA  +NG++ D SD + E  +++IITP+
Sbjct: 4   ITLPNGDQKQFDQAVSVMDVAQSIGPGLAKNTVAGRVNGQLVDASDLITEDATLQIITPK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   + +IRHSCAH++  AV+ ++PE ++ IGP+IE+GFYYD    +PF+ D++A IE++
Sbjct: 64  DEEGVEIIRHSCAHLVGHAVKQLFPEAKMVIGPVIEEGFYYDIWMPRPFTLDDMAAIEER 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+++I +D   +K+    ++    F ++ E YK+ ++  +P +  + LY   ++ D+CRG
Sbjct: 124 MKKLIDQDYDVIKKMTPRDEVIAEFTARGEEYKLRLIADMPEETQMGLYYHQDYLDMCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +T  +K F KL K++GAYWRGD+    L RIYGTAW  +++L  Y+  +EE+EKRD
Sbjct: 184 PHVPNTKFLKSF-KLTKISGAYWRGDAKNEQLQRIYGTAWADKKQLAAYIKRIEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHL 304
           HRK+ + +DLFH+ E+  G++FWH  GW I+Q L  YMR+  +D+ Y EI TPQ++D  L
Sbjct: 243 HRKIGKALDLFHMQEEAPGMVFWHPNGWTIYQVLEQYMRKVQQDNGYLEIKTPQIVDFTL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGH  +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYR+LP+RLAE
Sbjct: 303 WEKSGHAANYADNMFT------THSESRNYAVKPMNCPCHVQVFNQGLKSYRDLPIRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNEPSGSLHG+MRVRGFTQDDAH+FCTKEQ+  E      L + +YKDFGFE + 
Sbjct: 357 FGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTKEQIGPEVADFIKLTLDVYKDFGFEDVQ 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +KLSTRPEKRVG DALWD AE  +   LD         +   +  GEGAFYGPK E+ LK
Sbjct: 417 MKLSTRPEKRVGDDALWDMAEKSLADALDAAG------LEWELQPGEGAFYGPKIEFSLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D +GR WQCGTIQ DFNLP R +A +V   +E+  PVM+HRA+ GS ERFIGI+IE++ G
Sbjct: 471 DCLGRVWQCGTIQCDFNLPERLDASFVTEDNERDQPVMLHRAILGSFERFIGILIEHYAG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
            +P WL+P+QA V  IT S  +  +++   LK + +   +D RNE I +KIRE ++++IP
Sbjct: 531 FMPPWLAPVQACVMNITDSQAQACEQVVAKLKENGIRAISDLRNEKIGFKIRERTLERIP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +++ GD+E  E ++ +R         +S +DA   L K
Sbjct: 591 YLLVLGDREVEEGTVNVRTRSGKNLGTMS-IDAFNDLVK 628


>gi|85711636|ref|ZP_01042693.1| threonyl-tRNA synthetase [Idiomarina baltica OS145]
 gi|85694496|gb|EAQ32437.1| threonyl-tRNA synthetase [Idiomarina baltica OS145]
          Length = 638

 Score =  639 bits (1647), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 299/619 (48%), Positives = 421/619 (68%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  DVA+ I   LAK  VA  I+G++ D  + +  +  IEI+TP+
Sbjct: 4   ITLPDGSQREFDQPVSILDVAQDIGAGLAKATVAGRIDGELVDACEMIEHDARIEIVTPK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A + +WP+ ++AIGP+I++GFYYD D +   + D+L ++EK+
Sbjct: 64  DDDGLHIIRHSCAHLLGHAFKQLWPDAKMAIGPVIDNGFYYDVDVDHTLTQDDLDKLEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M+E+   +   +K+ +S ++ARE F  + E YKVEIL E IP   N  LY   E+ D+CR
Sbjct: 124 MKELAKTEYQVIKKKVSWQEARETFVERHEPYKVEILDEDIPTDANPGLYHHEEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV  T +  + FK+MK+AGAYWRG+S+  ML R+YGTAW  +++L  YL  LEE+EKR
Sbjct: 184 GPHV-PTMKFCQHFKVMKMAGAYWRGNSDNKMLQRVYGTAWADKKQLKAYLQRLEEAEKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +  DLFH  E+  G++FWH  GW IF+ L  ++R K+++  Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKAQDLFHWQEEAPGMVFWHHNGWTIFRELEDFVREKLREYQYQEVKGPMMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SGHW+ +   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKSGHWEKFSDLMFT------TSSENREYAVKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSG+LHGLMRVRGFTQDDAHVFCT++Q+ +E      ++   Y+ FGF+KI
Sbjct: 357 EFGSCHRNEPSGALHGLMRVRGFTQDDAHVFCTEDQVQDEVAACIKMVYETYETFGFDKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPEKR+G DA WD +E   K + D +K      I+   L GEGAFYGPK E+ L
Sbjct: 417 DVKLSTRPEKRLGDDATWDRSE---KALADALKAHD---IDFTYLPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D +GR WQCGTIQ+DF LP R NA YV   +++  PVMIHRA+ GS+ERF+GI+IE + 
Sbjct: 471 FDCLGRAWQCGTIQLDFALPGRLNATYVGEDNDRHTPVMIHRAILGSLERFMGILIEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           GN PLWL+P Q ++  IT +  +Y  ++   L    +    D RNE I +KIREH++K++
Sbjct: 531 GNFPLWLAPTQVVLMNITDNQRDYVNKVVKSLNEKGIRASADLRNEKIGFKIREHTLKRV 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++ GDKE     + +R
Sbjct: 591 PYLLVVGDKEVEAGEVAVR 609


>gi|16764684|ref|NP_460299.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|167991842|ref|ZP_02572941.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|168244449|ref|ZP_02669381.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|194448321|ref|YP_002045340.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|197262906|ref|ZP_03162980.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|22654123|sp|Q8ZPS9|SYT_SALTY RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|238690646|sp|B4TGH1|SYT_SALHS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|16419852|gb|AAL20258.1| threonine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|194406625|gb|ACF66844.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|197241161|gb|EDY23781.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|205329759|gb|EDZ16523.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|205336802|gb|EDZ23566.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|261246542|emb|CBG24352.1| ThrRS [Salmonella enterica subsp. enterica serovar Typhimurium str.
           D23580]
 gi|267993213|gb|ACY88098.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
 gi|301157870|emb|CBW17364.1| Threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312912318|dbj|BAJ36292.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. T000240]
 gi|321223961|gb|EFX49024.1| Threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
 gi|323129604|gb|ADX17034.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
 gi|332988221|gb|AEF07204.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. UK-1]
          Length = 642

 Score =  639 bits (1647), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 298/641 (46%), Positives = 430/641 (67%), Gaps = 16/641 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D SD +  + ++ IIT +
Sbjct: 4   ITLPDGSQRHYDHPVSPMDVALDIGPGLAKATIAGRVNGELVDASDLIENDATLSIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ +WP  ++AIGP++++GFYYD D ++  + +++  +EK+
Sbjct: 64  DEEGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVVDNGFYYDVDLDRTLTQEDVEALEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+  ++   +K+ +S   ARE F  + E YKV IL E+I   +   LY   E+ D+CR
Sbjct: 124 MHELAEKNYDVIKKKVSWHDARETFVKRGETYKVAILDENIAHDDKPGLYHHEEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKLMK AGAYWRGDSN  ML RIYGTAW  ++ L  YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLMKTAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF+ L  ++R K+K+  Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHWD+Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWDNYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  FGFEKI
Sbjct: 357 EFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQIRDEVNACIRMVYDMYSTFGFEKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRP+KR+GSD +WD AE  +   L+      ++ I     LGEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPDKRIGSDEMWDRAEADLAVALE------ENNIPFEYQLGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF+LPSR +A YV   +E+  PVMIHRA+ GS+ERFIGI+ E F 
Sbjct: 471 YDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+Q +V  IT S  EY  E+   L++  + ++ D RNE I +KIREH+++++
Sbjct: 531 GFFPTWLAPVQVVVMNITDSQSEYVNELTQKLQNAGIRVKADLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P +++CGDKE     + +R         + + D I  L +E
Sbjct: 591 PYMLVCGDKEVEAGKVAVRTRRGKDLGSLDVNDVIEKLQQE 631


>gi|309782526|ref|ZP_07677250.1| threonine--tRNA ligase [Ralstonia sp. 5_7_47FAA]
 gi|308918863|gb|EFP64536.1| threonine--tRNA ligase [Ralstonia sp. 5_7_47FAA]
          Length = 580

 Score =  639 bits (1647), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 306/592 (51%), Positives = 409/592 (69%), Gaps = 15/592 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I +T PDGS + FP   T ++VA+SI   LAK A+A  ++G++ D S  + R+  + IIT
Sbjct: 2   IAITLPDGSRREFPGPVTVAEVAQSIGAGLAKAALAGRVDGQMVDTSYTIDRDAKLAIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   + VIRHS AH++A AV+ ++P+ QV IGP+IE+GFYYDF  ++PF+ D+L  IE
Sbjct: 62  DKDADGVDVIRHSTAHLLAYAVKELYPDAQVTIGPVIENGFYYDFAYKRPFTPDDLVAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           KKM E+  +D    ++ LS + A +LF+   E YK EI+ SIP  + + LYR+G + DLC
Sbjct: 122 KKMGELAKKDEKVTREVLSRDDAVKLFQGMGEKYKAEIIASIPEDQEIGLYREGNFVDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV STG++K  FKLMKVAGAYWRGD N  ML RIYGTAW  +++   YL+ LEE+EK
Sbjct: 182 RGPHVPSTGKLK-VFKLMKVAGAYWRGDHNNEMLQRIYGTAWAKREDQDAYLHMLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQ 302
           RDHRKL RE+DLFHI E   G +FWH KGW ++Q +  YMRR  +++ Y+E+  PQ+LD+
Sbjct: 241 RDHRKLGRELDLFHIDEYSPGTVFWHPKGWTLWQEIEQYMRRVYRENGYQEVKGPQILDK 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+++GHWD YR NMF       T  + R +ALKPMNCPGH+ ++  G+KSYR+LP+R 
Sbjct: 301 TLWEKTGHWDKYRENMFI------TESEKREYALKPMNCPGHILIYKQGIKSYRDLPLRF 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG+ +RNEPSG LHG+MRVRGFTQDD H+FCT++ +  E      L+  +YKDFGF +
Sbjct: 355 GEFGACHRNEPSGGLHGIMRVRGFTQDDGHIFCTEDMIQAEVTAFTTLLQKVYKDFGFTE 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+ KLSTRP+KR+G++  WD AE  +    + ++ S         L GEGAFYGPK EY+
Sbjct: 415 ILYKLSTRPDKRIGTEESWDRAEAALA---EGLRASG---CEFEYLPGEGAFYGPKIEYV 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LKDA+GR WQCGTIQVD NLP R +A +V     +  P+M+HRA+ GS+ERFIGI+IE +
Sbjct: 469 LKDALGRQWQCGTIQVDPNLPERLDAEFVGEDGARHRPIMLHRAIVGSLERFIGILIEQY 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
            G LP WLSP+Q  V +IT S  EYAQ +A  L+        D RNE I YK
Sbjct: 529 AGALPTWLSPVQVAVLSITDSHAEYAQSVAQSLQKQGFRAVVDLRNEKIGYK 580


>gi|161614260|ref|YP_001588225.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi B str. SPB7]
 gi|194446059|ref|YP_002040590.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|198243456|ref|YP_002215793.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|207857160|ref|YP_002243811.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|189083620|sp|A9N243|SYT_SALPB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|238690315|sp|B5FJA8|SYT_SALDC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|238690400|sp|B5QVW8|SYT_SALEP RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|238693615|sp|B4T4M8|SYT_SALNS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|161363624|gb|ABX67392.1| hypothetical protein SPAB_02005 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194404722|gb|ACF64944.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|197937972|gb|ACH75305.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|206708963|emb|CAR33293.1| Threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
          Length = 642

 Score =  638 bits (1646), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 298/641 (46%), Positives = 430/641 (67%), Gaps = 16/641 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D SD +  + ++ IIT +
Sbjct: 4   ITLPDGSQRHYDHPVSPMDVALDIGPGLAKATIAGRVNGELVDASDLIENDATLAIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ +WP  ++AIGP++++GFYYD D ++  + +++  +EK+
Sbjct: 64  DEEGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVVDNGFYYDVDLDRTLTQEDVEALEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+  ++   +K+ +S   ARE F  + E YKV IL E+I   +   LY   E+ D+CR
Sbjct: 124 MHELAEKNYDVIKKKVSWHDARETFVKRGETYKVAILDENIAHDDKPGLYHHEEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKLMK AGAYWRGDSN  ML RIYGTAW  ++ L  YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLMKTAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF+ L  ++R K+K+  Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHWD+Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWDNYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  FGFEKI
Sbjct: 357 EFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQIRDEVNACIRMVYDMYSTFGFEKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRP+KR+GSD +WD AE  +   L+      ++ I     LGEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPDKRIGSDEMWDRAEADLAVALE------ENNIPFEYQLGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF+LPSR +A YV   +E+  PVMIHRA+ GS+ERFIGI+ E F 
Sbjct: 471 YDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+Q +V  IT S  EY  E+   L++  + ++ D RNE I +KIREH+++++
Sbjct: 531 GFFPTWLAPVQVVVMNITDSQSEYVNELTQKLQNAGIRVKADLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P +++CGDKE     + +R         + + D I  L +E
Sbjct: 591 PYMLVCGDKEVEAGKVAVRTRRGKDLGSLDVNDVIEKLQQE 631


>gi|16129675|ref|NP_416234.1| threonyl-tRNA synthetase [Escherichia coli str. K-12 substr.
           MG1655]
 gi|24112885|ref|NP_707395.1| threonyl-tRNA synthetase [Shigella flexneri 2a str. 301]
 gi|26247970|ref|NP_754010.1| threonyl-tRNA synthetase [Escherichia coli CFT073]
 gi|30063014|ref|NP_837185.1| threonyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|74311961|ref|YP_310380.1| threonyl-tRNA synthetase [Shigella sonnei Ss046]
 gi|89108559|ref|AP_002339.1| threonyl-tRNA synthetase [Escherichia coli str. K-12 substr. W3110]
 gi|91210933|ref|YP_540919.1| threonyl-tRNA synthetase [Escherichia coli UTI89]
 gi|110641840|ref|YP_669570.1| threonyl-tRNA synthetase [Escherichia coli 536]
 gi|110805471|ref|YP_688991.1| threonyl-tRNA synthetase [Shigella flexneri 5 str. 8401]
 gi|117623893|ref|YP_852806.1| threonyl-tRNA synthetase [Escherichia coli APEC O1]
 gi|170081377|ref|YP_001730697.1| threonyl-tRNA synthetase [Escherichia coli str. K-12 substr. DH10B]
 gi|170680212|ref|YP_001743530.1| threonyl-tRNA synthetase [Escherichia coli SMS-3-5]
 gi|188492265|ref|ZP_02999535.1| threonyl-tRNA synthetase [Escherichia coli 53638]
 gi|191171752|ref|ZP_03033299.1| threonyl-tRNA synthetase [Escherichia coli F11]
 gi|194435142|ref|ZP_03067376.1| threonyl-tRNA synthetase [Shigella dysenteriae 1012]
 gi|194438580|ref|ZP_03070669.1| threonyl-tRNA synthetase [Escherichia coli 101-1]
 gi|215486938|ref|YP_002329369.1| threonyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69]
 gi|218558588|ref|YP_002391501.1| threonyl-tRNA synthetase [Escherichia coli S88]
 gi|218689663|ref|YP_002397875.1| threonyl-tRNA synthetase [Escherichia coli ED1a]
 gi|218699714|ref|YP_002407343.1| threonyl-tRNA synthetase [Escherichia coli IAI39]
 gi|218705218|ref|YP_002412737.1| threonyl-tRNA synthetase [Escherichia coli UMN026]
 gi|237705668|ref|ZP_04536149.1| threonyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
 gi|238900934|ref|YP_002926730.1| threonyl-tRNA synthetase [Escherichia coli BW2952]
 gi|253773326|ref|YP_003036157.1| threonyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|254161779|ref|YP_003044887.1| threonyl-tRNA synthetase [Escherichia coli B str. REL606]
 gi|256022617|ref|ZP_05436482.1| threonyl-tRNA synthetase [Escherichia sp. 4_1_40B]
 gi|293405218|ref|ZP_06649210.1| threonyl-tRNA synthetase [Escherichia coli FVEC1412]
 gi|293410035|ref|ZP_06653611.1| threonyl-tRNA synthetase [Escherichia coli B354]
 gi|293415037|ref|ZP_06657680.1| threonyl-tRNA synthetase [Escherichia coli B185]
 gi|297517244|ref|ZP_06935630.1| threonyl-tRNA synthetase [Escherichia coli OP50]
 gi|298380861|ref|ZP_06990460.1| threonyl-tRNA synthetase [Escherichia coli FVEC1302]
 gi|300938947|ref|ZP_07153648.1| threonyl-tRNA synthetase [Escherichia coli MS 21-1]
 gi|300987614|ref|ZP_07178286.1| threonyl-tRNA synthetase [Escherichia coli MS 200-1]
 gi|300994418|ref|ZP_07180923.1| threonyl-tRNA synthetase [Escherichia coli MS 45-1]
 gi|301017728|ref|ZP_07182383.1| threonyl-tRNA synthetase [Escherichia coli MS 69-1]
 gi|301025270|ref|ZP_07188835.1| threonyl-tRNA synthetase [Escherichia coli MS 196-1]
 gi|306815028|ref|ZP_07449184.1| threonyl-tRNA synthetase [Escherichia coli NC101]
 gi|307138378|ref|ZP_07497734.1| threonyl-tRNA synthetase [Escherichia coli H736]
 gi|312966921|ref|ZP_07781139.1| threonyl-tRNA synthetase [Escherichia coli 2362-75]
 gi|331642316|ref|ZP_08343451.1| threonine--tRNA ligase [Escherichia coli H736]
 gi|331653119|ref|ZP_08354124.1| threonine--tRNA ligase [Escherichia coli M718]
 gi|67473036|sp|P0A8M3|SYT_ECOLI RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|67473037|sp|P0A8M4|SYT_ECOL6 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|67473038|sp|P0A8M5|SYT_SHIFL RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|122957455|sp|Q0T4S9|SYT_SHIF8 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|123084457|sp|Q1RB76|SYT_ECOUT RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|123343967|sp|Q0THB0|SYT_ECOL5 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|123732358|sp|Q3Z267|SYT_SHISS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|166223339|sp|A1ABQ2|SYT_ECOK1 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|226701400|sp|B7MAS9|SYT_ECO45 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|226701401|sp|B7NT58|SYT_ECO7I RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|226701403|sp|B7N556|SYT_ECOLU RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|226701404|sp|B1LE12|SYT_ECOSM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|229557979|sp|B1XGI1|SYT_ECODH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|254783521|sp|B7USA2|SYT_ECO27 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|254783523|sp|B7MVJ7|SYT_ECO81 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|259516437|sp|C4ZYI1|SYT_ECOBW RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|5107656|pdb|1QF6|A Chain A, Structure Of E. Coli Threonyl-Trna Synthetase Complexed
           With Its Cognate Trna
 gi|26108373|gb|AAN80575.1|AE016761_150 Threonyl-tRNA synthetase [Escherichia coli CFT073]
 gi|1742811|dbj|BAA15498.1| threonyl-tRNA synthetase [Escherichia coli str. K12 substr. W3110]
 gi|1788013|gb|AAC74789.1| threonyl-tRNA synthetase [Escherichia coli str. K-12 substr.
           MG1655]
 gi|24051829|gb|AAN43102.1| threonine tRNA synthetase [Shigella flexneri 2a str. 301]
 gi|30041263|gb|AAP16992.1| threonine tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|73855438|gb|AAZ88145.1| threonine tRNA synthetase [Shigella sonnei Ss046]
 gi|91072507|gb|ABE07388.1| threonyl-tRNA synthetase [Escherichia coli UTI89]
 gi|110343432|gb|ABG69669.1| threonyl-tRNA synthetase [Escherichia coli 536]
 gi|110615019|gb|ABF03686.1| threonine tRNA synthetase [Shigella flexneri 5 str. 8401]
 gi|115513017|gb|ABJ01092.1| threonine tRNA synthetase [Escherichia coli APEC O1]
 gi|169889212|gb|ACB02919.1| threonyl-tRNA synthetase [Escherichia coli str. K-12 substr. DH10B]
 gi|170517930|gb|ACB16108.1| threonyl-tRNA synthetase [Escherichia coli SMS-3-5]
 gi|188487464|gb|EDU62567.1| threonyl-tRNA synthetase [Escherichia coli 53638]
 gi|190908082|gb|EDV67674.1| threonyl-tRNA synthetase [Escherichia coli F11]
 gi|194416606|gb|EDX32741.1| threonyl-tRNA synthetase [Shigella dysenteriae 1012]
 gi|194422590|gb|EDX38588.1| threonyl-tRNA synthetase [Escherichia coli 101-1]
 gi|215265010|emb|CAS09396.1| threonyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69]
 gi|218365357|emb|CAR03078.1| threonyl-tRNA synthetase [Escherichia coli S88]
 gi|218369700|emb|CAR17469.1| threonyl-tRNA synthetase [Escherichia coli IAI39]
 gi|218427227|emb|CAR08113.2| threonyl-tRNA synthetase [Escherichia coli ED1a]
 gi|218432315|emb|CAR13205.1| threonyl-tRNA synthetase [Escherichia coli UMN026]
 gi|222033474|emb|CAP76215.1| Threonyl-tRNA synthetase [Escherichia coli LF82]
 gi|226900425|gb|EEH86684.1| threonyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
 gi|238863657|gb|ACR65655.1| threonyl-tRNA synthetase [Escherichia coli BW2952]
 gi|242377442|emb|CAQ32194.1| threonyl-tRNA synthetase [Escherichia coli BL21(DE3)]
 gi|253324370|gb|ACT28972.1| threonyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|253973680|gb|ACT39351.1| threonyl-tRNA synthetase [Escherichia coli B str. REL606]
 gi|253977874|gb|ACT43544.1| threonyl-tRNA synthetase [Escherichia coli BL21(DE3)]
 gi|260449158|gb|ACX39580.1| threonyl-tRNA synthetase [Escherichia coli DH1]
 gi|281600917|gb|ADA73901.1| Threonyl-tRNA synthetase [Shigella flexneri 2002017]
 gi|284921639|emb|CBG34711.1| threonyl-tRNA synthetase [Escherichia coli 042]
 gi|291427426|gb|EFF00453.1| threonyl-tRNA synthetase [Escherichia coli FVEC1412]
 gi|291432685|gb|EFF05664.1| threonyl-tRNA synthetase [Escherichia coli B185]
 gi|291470503|gb|EFF12987.1| threonyl-tRNA synthetase [Escherichia coli B354]
 gi|294493274|gb|ADE92030.1| threonyl-tRNA synthetase [Escherichia coli IHE3034]
 gi|298278303|gb|EFI19817.1| threonyl-tRNA synthetase [Escherichia coli FVEC1302]
 gi|299880135|gb|EFI88346.1| threonyl-tRNA synthetase [Escherichia coli MS 196-1]
 gi|300306094|gb|EFJ60614.1| threonyl-tRNA synthetase [Escherichia coli MS 200-1]
 gi|300400020|gb|EFJ83558.1| threonyl-tRNA synthetase [Escherichia coli MS 69-1]
 gi|300406264|gb|EFJ89802.1| threonyl-tRNA synthetase [Escherichia coli MS 45-1]
 gi|300456146|gb|EFK19639.1| threonyl-tRNA synthetase [Escherichia coli MS 21-1]
 gi|305851676|gb|EFM52129.1| threonyl-tRNA synthetase [Escherichia coli NC101]
 gi|307553740|gb|ADN46515.1| threonine tRNA synthetase [Escherichia coli ABU 83972]
 gi|307626794|gb|ADN71098.1| threonyl-tRNA synthetase [Escherichia coli UM146]
 gi|309701942|emb|CBJ01255.1| threonyl-tRNA synthetase [Escherichia coli ETEC H10407]
 gi|312288385|gb|EFR16287.1| threonyl-tRNA synthetase [Escherichia coli 2362-75]
 gi|315136359|dbj|BAJ43518.1| threonyl-tRNA synthetase [Escherichia coli DH1]
 gi|315286432|gb|EFU45867.1| threonyl-tRNA synthetase [Escherichia coli MS 110-3]
 gi|315290480|gb|EFU49854.1| threonyl-tRNA synthetase [Escherichia coli MS 153-1]
 gi|320181253|gb|EFW56172.1| Threonyl-tRNA synthetase [Shigella boydii ATCC 9905]
 gi|320194570|gb|EFW69201.1| Threonyl-tRNA synthetase [Escherichia coli WV_060327]
 gi|323937321|gb|EGB33600.1| threonyl-tRNA synthetase [Escherichia coli E1520]
 gi|323940615|gb|EGB36806.1| threonyl-tRNA synthetase [Escherichia coli E482]
 gi|323952226|gb|EGB48099.1| threonyl-tRNA synthetase [Escherichia coli H252]
 gi|323956620|gb|EGB52358.1| threonyl-tRNA synthetase [Escherichia coli H263]
 gi|323962102|gb|EGB57698.1| threonyl-tRNA synthetase [Escherichia coli H489]
 gi|323973902|gb|EGB69074.1| threonyl-tRNA synthetase [Escherichia coli TA007]
 gi|323978098|gb|EGB73184.1| threonyl-tRNA synthetase [Escherichia coli TW10509]
 gi|324011501|gb|EGB80720.1| threonyl-tRNA synthetase [Escherichia coli MS 60-1]
 gi|331039114|gb|EGI11334.1| threonine--tRNA ligase [Escherichia coli H736]
 gi|331049217|gb|EGI21289.1| threonine--tRNA ligase [Escherichia coli M718]
 gi|332758628|gb|EGJ88947.1| threonyl-tRNA synthetase [Shigella flexneri 2747-71]
 gi|333003769|gb|EGK23305.1| threonyl-tRNA synthetase [Shigella flexneri VA-6]
 gi|333004377|gb|EGK23908.1| threonyl-tRNA synthetase [Shigella flexneri K-218]
 gi|333006570|gb|EGK26070.1| threonyl-tRNA synthetase [Shigella flexneri K-272]
 gi|333018789|gb|EGK38082.1| threonyl-tRNA synthetase [Shigella flexneri K-227]
          Length = 642

 Score =  638 bits (1646), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 296/619 (47%), Positives = 423/619 (68%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D  D +  +  + IIT +
Sbjct: 4   ITLPDGSQRHYDHAVSPMDVALDIGPGLAKACIAGRVNGELVDACDLIENDAQLSIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ +WP  ++AIGP+I++GFYYD D ++  + +++  +EK+
Sbjct: 64  DEEGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVIDNGFYYDVDLDRTLTQEDVEALEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+  ++   +K+ +S  +ARE F ++ E+YKV IL E+I   +   LY   E+ D+CR
Sbjct: 124 MHELAEKNYDVIKKKVSWHEARETFANRGESYKVSILDENIAHDDKPGLYFHEEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKLMK AGAYWRGDSN  ML RIYGTAW  ++ L  YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLMKTAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF+ L  ++R K+K+  Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHWD+Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWDNYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+ +E      L+  +Y  FGFEKI
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+GSD +WD AE  +   L+      ++ I     LGEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEKRIGSDEMWDRAEADLAVALE------ENNIPFEYQLGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF+LPSR +A YV   +E+  PVMIHRA+ GS+ERFIGI+ E F 
Sbjct: 471 YDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+Q ++  IT S  EY  E+   L +  + ++ D RNE I +KIREH+++++
Sbjct: 531 GFFPTWLAPVQVVIMNITDSQSEYVNELTQKLSNAGIRVKADLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++CGDKE     + +R
Sbjct: 591 PYMLVCGDKEVESGKVAVR 609


>gi|226954309|ref|ZP_03824773.1| threonyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
 gi|226834935|gb|EEH67318.1| threonyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
          Length = 640

 Score =  638 bits (1646), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 306/642 (47%), Positives = 430/642 (66%), Gaps = 16/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPE 65
           +T P+G  K F    +  ++A+SI   LAK  VA  IN ++ D  D + E  +++IITP+
Sbjct: 4   ITLPNGDQKQFDQPISVMELAQSIGPGLAKNTVAGRINDRLVDACDLITEDATVQIITPK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  AV+ ++PE ++ IGP+IE+GFYYD    +PF+ D++A IE++
Sbjct: 64  DEEGLEIIRHSCAHLVGHAVKQLFPEAKMVIGPVIEEGFYYDIWMPRPFTLDDMAAIEER 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+++I +D   +K+    E     F ++ E YK+ ++  +P +  + LY   ++ D+CRG
Sbjct: 124 MKKLIDQDYDVIKKMTPREDVIAEFTARGEEYKLRLIADMPEETQMGLYYHQDYLDMCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +T  +K F KL K++GAYWRGD+    L RIYGTAW  +++L  Y+  +EE+EKRD
Sbjct: 184 PHVPNTKFLKSF-KLTKISGAYWRGDAKNEQLQRIYGTAWADKKQLAAYIKRIEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHL 304
           HRK+ + +DLFH+ E+  G++FWH  GW I+Q L  YMR+  +D+ Y+EI TPQ++D  L
Sbjct: 243 HRKIGKALDLFHMQEEAPGMVFWHANGWTIYQVLEQYMRKVQQDNGYQEIKTPQIVDFTL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGH  +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYR+LP+RLAE
Sbjct: 303 WEKSGHAANYAENMFT------THSESRNYAVKPMNCPCHVQVFNQGLKSYRDLPIRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNEPSGSLHG+MRVRGFTQDDAH+FCTKEQ+  E      L + +YKDFGFE++ 
Sbjct: 357 FGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTKEQIGQEVADFIKLTLDVYKDFGFEEVQ 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +KLSTRPEKRVG DALWD AE  +   LD         +   +  GEGAFYGPK E+ LK
Sbjct: 417 MKLSTRPEKRVGDDALWDIAEKSLADALDDAG------LAWDLQPGEGAFYGPKIEFSLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D +GR WQCGTIQ DFNLP R +A YV   +E+  PVM+HRA+ GS ERFIGI+IE++ G
Sbjct: 471 DCLGRVWQCGTIQCDFNLPIRLDASYVTEDNERDQPVMLHRAILGSFERFIGILIEHYAG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
            +P WL+PIQA V  IT S  +  +++   LK   L   +D RNE I +KIRE ++++IP
Sbjct: 531 FMPPWLAPIQACVMNITDSQADACEQVVAKLKESGLRAISDLRNEKIGFKIRERTLERIP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
            +++ GD+E  E ++ +R         +S +DA   L K ++
Sbjct: 591 YLLVLGDREVEEGTVNVRTRSGKNLGTMS-IDAFIDLVKSAV 631


>gi|56413681|ref|YP_150756.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197362604|ref|YP_002142241.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|73919824|sp|Q5PH96|SYT_SALPA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|238689908|sp|B5BA42|SYT_SALPK RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|56127938|gb|AAV77444.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197094081|emb|CAR59581.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
          Length = 642

 Score =  638 bits (1645), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 297/641 (46%), Positives = 432/641 (67%), Gaps = 16/641 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D SD +  + ++ IIT +
Sbjct: 4   ITLPDGSQRHYDHPVSPMDVALDIGPGLAKATIAGRVNGELVDASDLIENDATLSIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ +WP  ++AIGP++++GFYYD D ++  + +++  +EK+
Sbjct: 64  DEEGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVVDNGFYYDVDLDRTLTQEDVEALEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+  ++   +K+ +S  +ARE F  + E+YKV IL E+I   +   LY   E+ D+CR
Sbjct: 124 MHELAEKNYDVIKKKVSWHEARETFVKRGESYKVSILDENIAHDDKPGLYHHEEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKLMK AGAYWRGDSN  ML RIYGTAW  ++ L  YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLMKTAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF+ L  ++R K+K+  Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHWD+Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWDNYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  FGFEKI
Sbjct: 357 EFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQIRDEVNACIRMVYDMYSTFGFEKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRP+KR+GSD +WD AE  +   L+      ++ I     LGEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPDKRIGSDEMWDRAEADLAVALE------ENNIPFEYQLGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF+LPSR +A YV   +E+  PV+IHRA+ GS+ERFIGI+ E F 
Sbjct: 471 YDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPVIIHRAILGSMERFIGILTEEFA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+Q +V  IT S  EY  E+   L++  + ++ D RNE I +KIREH+++++
Sbjct: 531 GFFPTWLAPVQVVVMNITDSQSEYVNELTQKLQNAGIRVKADLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P +++CGDKE     + +R         + + D I  L +E
Sbjct: 591 PYMLVCGDKEVEAGKVAVRTRRGKDLGSLDVNDVIEKLQQE 631


>gi|294789007|ref|ZP_06754247.1| threonine--tRNA ligase [Simonsiella muelleri ATCC 29453]
 gi|294483109|gb|EFG30796.1| threonine--tRNA ligase [Simonsiella muelleri ATCC 29453]
          Length = 638

 Score =  638 bits (1645), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 296/643 (46%), Positives = 434/643 (67%), Gaps = 17/643 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           + +T PDGS++ +    T   +A+SI   LAK  VA  +NG + D  DP+ E  +++IIT
Sbjct: 2   LNITLPDGSVRQYESPTTVMQIAQSIGAGLAKVTVAGKVNGVLRDACDPITEDATVQIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+D   + +IRHSCAH++  AV+ ++P  ++ IGP+I++GFYYD   E+PF+ +++A IE
Sbjct: 62  PKDQDGVEIIRHSCAHLVGHAVKQLFPNAKMVIGPVIDEGFYYDIATEKPFTPEDMAAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-ENVTLYRQGEWFDL 182
           ++M+++I +D   +K+     +  E+F+++ E YK+ +++ +      + +Y   E+ D+
Sbjct: 122 ERMKQLINQDYDVIKKMTPRAEVIEIFKNRGEEYKLRLIDDMADDITEMGMYFHQEYVDM 181

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +T +  K FKL K++GAYWRGDSN   L RIYGTAW  + EL  Y+  +EE+E
Sbjct: 182 CRGPHVPNT-RFLKHFKLTKMSGAYWRGDSNNEQLQRIYGTAWANKDELKAYITRIEEAE 240

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL +++DLFH+ ++  G++FWH +GW ++Q +  +MR ++    Y+E+ TPQV+D
Sbjct: 241 KRDHRKLGKQLDLFHLQDEAPGMVFWHPRGWALWQVIEQHMRHELTAAGYQEVKTPQVMD 300

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           +  W++SGHW +Y+ NMF       T  + R +A+KPMNCPGHV +FNH L+SYR+LP+R
Sbjct: 301 KTFWEKSGHWANYKDNMFL------TSSEKRDYAVKPMNCPGHVQIFNHALRSYRDLPMR 354

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+  E  K + L++ IY+ FGFE
Sbjct: 355 LAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIAEETRKFNLLVMKIYQQFGFE 414

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + +KLS RPEKR GSD +WD AE  ++  L       ++      L GEGAFYGPK EY
Sbjct: 415 NVSIKLSLRPEKRAGSDEIWDKAEQGLRDALTACGVEWEE------LPGEGAFYGPKVEY 468

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+GR WQCGTIQ+DF LP R +A YV   + K  PVM+HRA+ GS+ERFIGI+IE 
Sbjct: 469 HIKDALGRSWQCGTIQLDFVLPERLDAEYVTEDNNKARPVMLHRAILGSLERFIGILIEE 528

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G+ PLWL+P+Q +V  I+     YA E+   L++    ++ D RNE I YKIR++S  
Sbjct: 529 HAGSFPLWLAPVQMVVMNISEGQAAYAAEVQAKLQAAGFRVDLDTRNEKIGYKIRDNSTM 588

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           + P  +  GDKE +   + IR+  +     VS+ + I +L KE
Sbjct: 589 RYPYQLTVGDKEMANGQVSIRK-KAENLGSVSVNELIEMLKKE 630


>gi|299771535|ref|YP_003733561.1| threonyl-tRNA synthetase [Acinetobacter sp. DR1]
 gi|298701623|gb|ADI92188.1| threonyl-tRNA synthetase [Acinetobacter sp. DR1]
          Length = 640

 Score =  638 bits (1645), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 306/642 (47%), Positives = 432/642 (67%), Gaps = 16/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPE 65
           +T P+G  K+F    +  +VA+SI   LAK  VA  +N ++ D  D + E S ++IITP+
Sbjct: 4   ITLPNGDQKSFDHAVSVMEVAQSIGPGLAKNTVAGRVNDRLVDACDLITEDSTLQIITPK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  AV+ ++PE ++ IGP+IE+GFYYD    +PF+ D++A IE++
Sbjct: 64  DEEGLEIIRHSCAHLVGHAVKQLFPEAKMVIGPVIEEGFYYDIWMPRPFTLDDMAAIEER 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+++I +D   +K+    ++    F ++ E YK+ ++  +P +  + LY   ++ D+CRG
Sbjct: 124 MKKLIDQDYDVVKKMTPRDEVIAEFTARGEEYKLRLIADMPEETQMGLYYHQDYLDMCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +T  +K F KL K++GAYWRGD+    L RIYGTAW  +++L  Y+  +EE+EKRD
Sbjct: 184 PHVPNTKFLKSF-KLTKISGAYWRGDAKNEQLQRIYGTAWADKKQLAAYIKRIEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHL 304
           HRK+ + +DLFH+ E+  G++FWH  GW I+Q L  YMR+  +D+ Y EI TPQ++D  L
Sbjct: 243 HRKIGKALDLFHMQEEAPGMVFWHPNGWTIYQVLEQYMRKVQQDNGYLEIKTPQIVDFTL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGH  +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYR+LP+RLAE
Sbjct: 303 WEKSGHAANYADNMFT------THSESRNYAVKPMNCPCHVQVFNQGLKSYRDLPIRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNEPSGSLHG+MRVRGFTQDDAH+FCTKEQ+  E      L + +YKDFGFE++ 
Sbjct: 357 FGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTKEQIGQEVADFIKLTLDVYKDFGFEEVQ 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +KLSTRPEKRVG DALWD AE  +   LD         +   +  GEGAFYGPK E+ LK
Sbjct: 417 MKLSTRPEKRVGDDALWDMAEKSLADALDAAG------LEWELQPGEGAFYGPKIEFSLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D +GR WQCGTIQ DFNLP R +A YV   +++  PVM+HRA+ GS ERFIGI+IE++ G
Sbjct: 471 DCLGRVWQCGTIQCDFNLPERLDASYVTEDNDRDQPVMLHRAILGSFERFIGILIEHYAG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
            +P WLSP+QA V  IT S  E  +++   LK + L   +D RNE I +KIRE ++++IP
Sbjct: 531 FMPPWLSPLQACVMNITDSQAEACEKVVAKLKENGLRAISDLRNEKIGFKIRERTLERIP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
            +++ GD+E  E ++ +R         +S +DA   L K ++
Sbjct: 591 YLLVLGDREVEEGTVNVRTRSGKNLGTMS-VDAFIDLVKSAV 631


>gi|262374878|ref|ZP_06068112.1| threonyl-tRNA synthetase [Acinetobacter lwoffii SH145]
 gi|262309891|gb|EEY91020.1| threonyl-tRNA synthetase [Acinetobacter lwoffii SH145]
          Length = 640

 Score =  638 bits (1645), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 307/642 (47%), Positives = 431/642 (67%), Gaps = 16/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPE 65
           +T P+G  K F    +  DVA SI   LAK  VA  +N ++ D SD + E  +++IITP+
Sbjct: 4   ITLPNGDQKQFDHAVSVMDVALSIGPGLAKNTVAGRVNDRLVDASDLITEDATLQIITPK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   + +IRHSCAH++  AV+ ++PE ++ IGP+IE+GFYYD    +PF+ D++A IE++
Sbjct: 64  DEAGVEIIRHSCAHLVGHAVKQLFPEAKMVIGPVIEEGFYYDIWMPRPFTLDDMAAIEER 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+++I +D   +K+    ++    F ++ E YK+ ++  +P +  + LY   ++ D+CRG
Sbjct: 124 MKKLIDQDYDVVKKMTPRDEVIAEFTARGEEYKLRLIADMPEETQMGLYYHQDYLDMCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +T  +K F KL K++GAYWRGD+    L RIYGTAW  +++L  Y+  +EE+EKRD
Sbjct: 184 PHVPNTKFLKSF-KLTKISGAYWRGDAKNEQLQRIYGTAWADKKQLAAYVKRIEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHL 304
           HRK+ + +DLFH+ E+  G++FWH  GW I+Q L  YMR+  +D+ YEEI TPQV+D  L
Sbjct: 243 HRKIGKALDLFHMQEEAPGMVFWHPNGWTIYQVLEQYMRKVQQDNGYEEIRTPQVVDFTL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGH  +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYR+LPVRLAE
Sbjct: 303 WEKSGHAANYADNMFT------THSENRNYAVKPMNCPCHVQVFNQGLKSYRDLPVRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNEPSGSLHG+MRVRGFTQDDAH+FCTKEQ+  E      L + +YKDFGFE++ 
Sbjct: 357 FGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTKEQIGPEVADFIKLTLDVYKDFGFEEVQ 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +KLSTRPEKRVG D LWD AE  +   LD         +   +  GEGAFYGPK E+ LK
Sbjct: 417 MKLSTRPEKRVGDDKLWDMAEKSLADALDAAG------LEWELQPGEGAFYGPKIEFSLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D +GR WQCGTIQ DFNLP R +A YV   +++  PVM+HRA+ GS ERFIGI+IE++ G
Sbjct: 471 DCLGRVWQCGTIQCDFNLPERLDASYVTEDNDRDQPVMLHRAILGSFERFIGILIEHYAG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
            +P WL+P+QA V  IT S  E  + +   LK + +   +D RNE I +KIRE ++++IP
Sbjct: 531 FMPPWLAPMQACVMNITDSQAEACESVVAKLKENGIRAISDLRNEKIGFKIRERTLERIP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
            +++ GD+E  E ++ +R    T    +S +DA   L K ++
Sbjct: 591 YLLVLGDREVEEGTVNVRTRSGTNLGTMS-IDAFVDLVKAAV 631


>gi|296102767|ref|YP_003612913.1| threonyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
 gi|295057226|gb|ADF61964.1| threonyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
          Length = 642

 Score =  638 bits (1645), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 297/641 (46%), Positives = 430/641 (67%), Gaps = 16/641 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS ++F    +  DVA  I   LAK  +A  +NG++ D SD +  +  + IIT +
Sbjct: 4   ITLPDGSQRHFDHAVSPMDVALDIGPGLAKATIAGRVNGELVDASDLIENDAQLSIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ +WP  ++AIGP+I++GFYYD D +   + +++  +EK+
Sbjct: 64  DEEGLEIIRHSCAHLLGHAIKQLWPNTKMAIGPVIDNGFYYDVDLDHTLTQEDIDALEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K+ +S  +ARE F  + E+YKV IL E+I   +   LY   E+ D+CR
Sbjct: 124 MHELAETNYDVIKKKVSWHEARETFVKRGESYKVSILDENIAHDDKPGLYHHQEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKLMK+AGAYWRGDSN  ML RIYGTAW  ++ L  YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLMKIAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF+ L +++R K+K+  Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELETFVRSKLKEYQYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHWD+Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWDNYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT++Q+ +E      ++  +Y  FGFEKI
Sbjct: 357 EFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEDQVRDEVNACIRMVYDMYSTFGFEKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+GSD  WD AE  +   L+      ++ I     LGEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEKRIGSDETWDRAEADLAVALE------ENGIPFEYQLGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF+LP R +A YV   +E+  PVMIHRA+ GS+ERFIGI+ E F 
Sbjct: 471 YDCLDRAWQCGTVQLDFSLPQRLSASYVGEDNERQVPVMIHRAILGSLERFIGILTEEFA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+Q +V  IT S  +Y +E+   L++  + ++ D RNE I +KIREH+++++
Sbjct: 531 GFFPTWLAPVQVVVMNITDSQADYVKELTQKLQNAGIRVKADLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P +++CGDKE     + +R         + + + I  L +E
Sbjct: 591 PYMLVCGDKEVEAGKVAVRTRRGKDLGSLDVSEVIEKLQQE 631


>gi|193065767|ref|ZP_03046830.1| threonyl-tRNA synthetase [Escherichia coli E22]
 gi|194428543|ref|ZP_03061082.1| threonyl-tRNA synthetase [Escherichia coli B171]
 gi|218554286|ref|YP_002387199.1| threonyl-tRNA synthetase [Escherichia coli IAI1]
 gi|260844071|ref|YP_003221849.1| threonyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009]
 gi|260855585|ref|YP_003229476.1| threonyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368]
 gi|260868246|ref|YP_003234648.1| threonyl-tRNA synthetase [Escherichia coli O111:H- str. 11128]
 gi|293446093|ref|ZP_06662515.1| threonyl-tRNA synthetase [Escherichia coli B088]
 gi|331668404|ref|ZP_08369252.1| threonine--tRNA ligase [Escherichia coli TA271]
 gi|331677592|ref|ZP_08378267.1| threonine--tRNA ligase [Escherichia coli H591]
 gi|226701402|sp|B7M1C7|SYT_ECO8A RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|192926539|gb|EDV81170.1| threonyl-tRNA synthetase [Escherichia coli E22]
 gi|194413421|gb|EDX29704.1| threonyl-tRNA synthetase [Escherichia coli B171]
 gi|195182909|dbj|BAG66479.1| threonyl-tRNA synthetase [Escherichia coli O111:H-]
 gi|218361054|emb|CAQ98632.2| threonyl-tRNA synthetase [Escherichia coli IAI1]
 gi|257754234|dbj|BAI25736.1| threonyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368]
 gi|257759218|dbj|BAI30715.1| threonyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009]
 gi|257764602|dbj|BAI36097.1| threonyl-tRNA synthetase [Escherichia coli O111:H- str. 11128]
 gi|291322923|gb|EFE62351.1| threonyl-tRNA synthetase [Escherichia coli B088]
 gi|323153043|gb|EFZ39312.1| threonyl-tRNA synthetase [Escherichia coli EPECa14]
 gi|331063598|gb|EGI35509.1| threonine--tRNA ligase [Escherichia coli TA271]
 gi|331074052|gb|EGI45372.1| threonine--tRNA ligase [Escherichia coli H591]
          Length = 642

 Score =  638 bits (1645), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 296/619 (47%), Positives = 423/619 (68%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D  D +  +  + IIT +
Sbjct: 4   ITLPDGSQRHYDHAVSPMDVALDIGPGLAKACIAGRVNGELVDACDLIENDAQLSIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ +WP  ++AIGP+I++GFYYD D ++  + +++  +EK+
Sbjct: 64  DEDGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVIDNGFYYDVDLDRTLTQEDVEALEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+  ++   +K+ +S  +ARE F ++ E+YKV IL E+I   +   LY   E+ D+CR
Sbjct: 124 MHELAEKNYDVIKKKVSWHEARETFANRGESYKVSILDENIAHDDKPGLYFHEEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKLMK AGAYWRGDSN  ML RIYGTAW  ++ L  YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLMKTAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF+ L  ++R K+K+  Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHWD+Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWDNYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+ +E      L+  +Y  FGFEKI
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+GSD +WD AE  +   L+      ++ I     LGEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEKRIGSDEMWDRAEADLAVALE------ENNIPFEYQLGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF+LPSR +A YV   +E+  PVMIHRA+ GS+ERFIGI+ E F 
Sbjct: 471 YDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+Q ++  IT S  EY  E+   L +  + ++ D RNE I +KIREH+++++
Sbjct: 531 GFFPTWLAPVQVVIMNITDSQSEYVNELTQKLSNAGIRVKADLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++CGDKE     + +R
Sbjct: 591 PYMLVCGDKEVESGKVAVR 609


>gi|170717553|ref|YP_001784641.1| threonyl-tRNA synthetase [Haemophilus somnus 2336]
 gi|189083611|sp|B0UU42|SYT_HAES2 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|168825682|gb|ACA31053.1| threonyl-tRNA synthetase [Haemophilus somnus 2336]
          Length = 642

 Score =  637 bits (1644), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 298/641 (46%), Positives = 436/641 (68%), Gaps = 16/641 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPE 65
           +T PDGS + F    +  +VA+SI   LAK  +A  +NG+  D SD + E  ++EIIT +
Sbjct: 4   ITLPDGSQRQFDNPVSVLEVAQSIGSGLAKATIAGRVNGERRDASDMISEDANLEIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHS AH++  A++ ++P V++AIGP I++GFYYD D ++  + +++  +EK+
Sbjct: 64  DEDGLEIIRHSTAHLLGHAIKQLFPNVKMAIGPTIDNGFYYDIDLDRSLTQEDIDTLEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K+ +S ++AR+ FES+ E YK+ IL E+I   +   LY   E+ D+CR
Sbjct: 124 MLELAKTNYDVIKKRVSWQEARDTFESRAEPYKIAILDENIAKDDQPALYHHEEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKLMKVAGAYWRG+S+  ML RIYGTAW  +++L  YL+ LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLMKVAGAYWRGNSDNKMLQRIYGTAWADKKQLADYLHRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ + ++L+H+ E+  G++FWH  GW IF+ L +++R K+K+ DY+E+  P ++D+ 
Sbjct: 243 DHRKIGKALNLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW +Y   MF  +  +      R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWERTGHWQNYADLMFTTQSEN------REYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+ +E      ++  IY  FGF  I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQIESEVTSCIKMVYDIYSTFGFTDI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPEKR+G D +WD AE   +G+ + +K++    +   +  GEGAFYGPK E+ L
Sbjct: 417 FVKLSTRPEKRIGEDVMWDRAE---QGLANALKHNG---LEYEIQEGEGAFYGPKIEFAL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D + R+WQCGTIQ+DF LP R +A YV   + +  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 RDCLDREWQCGTIQLDFALPGRLDATYVAEDNARRTPVMIHRAILGSIERFIGIITEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+PIQA+V  IT S  +Y Q++        L ++ D RNE + +KIREH+++++
Sbjct: 531 GFFPAWLAPIQAVVMNITDSQADYVQKVVKQFSEAGLRVKADIRNEKVGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P +++CGDKE  E  I +R    T     S+ + + IL ++
Sbjct: 591 PYMLVCGDKEIVENKIAVRTRKGTDLGTFSVEEFVEILKQQ 631


>gi|152996610|ref|YP_001341445.1| threonyl-tRNA synthetase [Marinomonas sp. MWYL1]
 gi|189083612|sp|A6VYI1|SYT_MARMS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|150837534|gb|ABR71510.1| threonyl-tRNA synthetase [Marinomonas sp. MWYL1]
          Length = 645

 Score =  637 bits (1644), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 300/641 (46%), Positives = 435/641 (67%), Gaps = 16/641 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPE 65
           +T PDGS ++F    T   VAE I   LAK  VA  I+G++ D  + + + + + IIT +
Sbjct: 4   ITLPDGSQRSFSNPVTVMQVAEDIGPGLAKATVAGRIDGQLVDACELISDDAKLSIITGK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           DP  + +IRHS AH++  AV+ ++P  Q+AIGP+I++GFYYD   E+PF+ D+LA IEK+
Sbjct: 64  DPEGVEIIRHSFAHLVGHAVKQLYPTAQMAIGPVIDEGFYYDIAYERPFTPDDLAAIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESI-PAKENVTLYRQGEWFDLCR 184
           + E++  D   +K+     +AR+ F  + E+YKV +++ +  + + V LY   E+ D+CR
Sbjct: 124 IAELVKTDYDVVKRMTPIAEARQQFVDRGESYKVALIDDMDESTKEVGLYYHEEYMDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +T +V + FKLMK+AGAYWRGDSN  ML RIYGTAWN ++EL  YL  +EE+EKR
Sbjct: 184 GPHVPNT-RVLRHFKLMKLAGAYWRGDSNNEMLQRIYGTAWNDKKELKGYLTRIEEAEKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQH 303
           DHRKL +++DLFH+ E+  G++FWH KGW+++Q +  YMR+K + ++Y+E+ TPQ++D+ 
Sbjct: 243 DHRKLGKKLDLFHVQEEAPGMVFWHPKGWRLYQAVEQYMRQKQLDNNYQEVKTPQIVDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SGHW  Y  NMF     +      R +A+KPMNCP H+ V+N GLKSYR+LP R+A
Sbjct: 303 LWEKSGHWGKYHENMFTTHSEN------RDYAVKPMNCPCHIQVYNQGLKSYRDLPFRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSG+LHG+MRVR F QDD H+F T+ Q+  E  +  +L+  +Y DFGF+ I
Sbjct: 357 EFGSCHRNEPSGALHGIMRVRNFVQDDGHIFVTEGQIQQEVSEFIDLLHEVYADFGFDNI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           + +LSTRPE+RVGSD +WD AE  +   LD+     ++      L GEGAFYGPK E+ L
Sbjct: 417 VYRLSTRPEQRVGSDEVWDKAEKALSEALDSAGLDWEE------LPGEGAFYGPKIEFSL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           KDAIGR WQCGTIQVDF++P+R  A YV+    +  PVM+HRA+ GS+ERFIGI+IE+ +
Sbjct: 471 KDAIGRVWQCGTIQVDFSMPTRLGAQYVSEDGSRQTPVMLHRAIVGSLERFIGILIEDTE 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P+WL+P Q ++  IT    +Y   +   L S+    + D RNE I +KIREH+++++
Sbjct: 531 GAFPVWLAPEQVVIMNITDRQADYCSVLEKRLNSNGFRAKLDLRNEKIGFKIREHTLQRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P +I+ GDKE  +  + +R         +S+ D   +L +E
Sbjct: 591 PYMIVVGDKEVEQEQVAVRTRTGEDLGVMSISDFEGLLQQE 631


>gi|293610405|ref|ZP_06692706.1| threonyl-tRNA synthetase [Acinetobacter sp. SH024]
 gi|292827637|gb|EFF86001.1| threonyl-tRNA synthetase [Acinetobacter sp. SH024]
 gi|325124561|gb|ADY84084.1| threonyl-tRNA synthetase [Acinetobacter calcoaceticus PHEA-2]
          Length = 640

 Score =  637 bits (1644), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 306/642 (47%), Positives = 432/642 (67%), Gaps = 16/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPE 65
           +T P+G  K+F    +  +VA+SI   LAK  VA  +N ++ D  D + E S ++IITP+
Sbjct: 4   ITLPNGDQKSFDHAVSVMEVAQSIGPGLAKNTVAGRVNDRLVDACDLITEDSTLQIITPK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  AV+ ++PE ++ IGP+IE+GFYYD    +PF+ D++A IE++
Sbjct: 64  DEEGLEIIRHSCAHLVGHAVKQLFPEAKMVIGPVIEEGFYYDIWMPRPFTLDDMAAIEER 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+++I +D   +K+    ++    F ++ E YK+ ++  +P +  + LY   ++ D+CRG
Sbjct: 124 MKKLIDQDYDVVKKMTPRDEVIAEFTARGEEYKLRLIADMPEETQMGLYYHQDYLDMCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +T  +K F KL K++GAYWRGD+    L RIYGTAW  +++L  Y+  +EE+EKRD
Sbjct: 184 PHVPNTKFLKSF-KLTKISGAYWRGDAKNEQLQRIYGTAWADKKQLAAYIKRIEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHL 304
           HRK+ + +DLFH+ E+  G++FWH  GW I+Q L  YMR+  +D+ Y EI TPQ++D  L
Sbjct: 243 HRKIGKALDLFHMQEEAPGMVFWHPNGWTIYQVLEQYMRKVQQDNGYLEIKTPQIVDFTL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGH  +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYR+LP+RLAE
Sbjct: 303 WEKSGHAANYADNMFT------THSENRNYAVKPMNCPCHVQVFNQGLKSYRDLPIRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNEPSGSLHG+MRVRGFTQDDAH+FCTKEQ+  E      L + +YKDFGFE++ 
Sbjct: 357 FGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTKEQIGQEVADFIKLTLEVYKDFGFEEVQ 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +KLSTRPEKRVG DALWD AE  +   LD         +   +  GEGAFYGPK E+ LK
Sbjct: 417 MKLSTRPEKRVGDDALWDMAEKSLADALDAAG------LEWELQPGEGAFYGPKIEFSLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D +GR WQCGTIQ DFNLP R +A YV   +++  PVM+HRA+ GS ERFIGI+IE++ G
Sbjct: 471 DCLGRVWQCGTIQCDFNLPERLDASYVTEDNDRDQPVMLHRAILGSFERFIGILIEHYAG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
            +P WLSP+QA V  IT S  E  +++   LK + L   +D RNE I +KIRE ++++IP
Sbjct: 531 FMPPWLSPLQACVMNITDSQAEACEKVVAKLKENGLRAISDLRNEKIGFKIRERTLERIP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
            +++ GD+E  E ++ +R         +S +DA   L K ++
Sbjct: 591 YLLVLGDREVEEGTVNVRTRSGKNLGTMS-VDAFIDLVKSAV 631


>gi|170768863|ref|ZP_02903316.1| threonyl-tRNA synthetase [Escherichia albertii TW07627]
 gi|170122411|gb|EDS91342.1| threonyl-tRNA synthetase [Escherichia albertii TW07627]
          Length = 642

 Score =  637 bits (1644), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 296/619 (47%), Positives = 422/619 (68%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D  D +  +  + IIT +
Sbjct: 4   ITLPDGSQRHYDHAVSPMDVALDIGPGLAKACIAGRVNGELVDACDLIENDAQLSIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ +WP  ++AIGP+I++GFYYD D ++  + +++  +EK+
Sbjct: 64  DEEGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVIDNGFYYDVDLDRTLTQEDVEALEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+  ++   +K+ +S  +ARE F  + E+YKV IL E+I   +   LY   E+ D+CR
Sbjct: 124 MHELAEKNYDVIKKKVSWHEARETFVKRGESYKVSILDENIAHDDQPGLYFHEEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKLMK AGAYWRGDSN  ML RIYGTAW  ++ L  YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLMKTAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF+ L  ++R K+K+  Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHWD+Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWDNYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+ +E      L+  +Y  FGFEKI
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+GSD +WD AE  +   L+      ++ I     LGEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEKRIGSDEMWDRAEADLAVALE------ENNIPFEYQLGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF+LPSR +A YV   +E+  PVMIHRA+ GS+ERFIGI+ E F 
Sbjct: 471 YDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+Q ++  IT S  EY  E+   L +  + ++ D RNE I +KIREH+++++
Sbjct: 531 GFFPTWLAPVQVVIMNITDSQSEYVNELTQKLSNAGIRVKADLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++CGDKE     + +R
Sbjct: 591 PYMLVCGDKEVESGKVAVR 609


>gi|82543879|ref|YP_407826.1| threonyl-tRNA synthetase [Shigella boydii Sb227]
 gi|187734126|ref|YP_001880509.1| threonyl-tRNA synthetase [Shigella boydii CDC 3083-94]
 gi|123769450|sp|Q321L0|SYT_SHIBS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|238689503|sp|B2U397|SYT_SHIB3 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|81245290|gb|ABB65998.1| threonine tRNA synthetase [Shigella boydii Sb227]
 gi|187431118|gb|ACD10392.1| threonyl-tRNA synthetase [Shigella boydii CDC 3083-94]
          Length = 642

 Score =  637 bits (1644), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 296/619 (47%), Positives = 422/619 (68%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D  D +  +  + IIT +
Sbjct: 4   ITLPDGSQRHYDHAVSPMDVALDIGPGLAKACIAGRVNGELVDACDLIENDAQLSIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ +WP  ++AIGP+I++GFYYD D ++  + +++  +EK+
Sbjct: 64  DEEGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVIDNGFYYDVDLDRTLTQEDVEALEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+  ++   +K+ +S   ARE F ++ E+YKV IL E+I   +   LY   E+ D+CR
Sbjct: 124 MHELAEKNYDVIKKKVSWHAARETFANRGESYKVSILDENIAHDDKPGLYFHEEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKLMK AGAYWRGDSN  ML RIYGTAW  ++ L  YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLMKTAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF+ L  ++R K+K+  Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHWD+Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWDNYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+ +E      L+  +Y  FGFEKI
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+GSD +WD AE  +   L+      ++ I     LGEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEKRIGSDEMWDRAEADLAVALE------ENNIPFEYQLGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF+LPSR +A YV   +E+  PVMIHRA+ GS+ERFIGI+ E F 
Sbjct: 471 YDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+Q ++  IT S  EY  E+   L +  + ++ D RNE I +KIREH+++++
Sbjct: 531 GFFPTWLAPVQVVIMNITDSQSEYVNELTQKLSNAGIRVKADLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++CGDKE     + +R
Sbjct: 591 PYMLVCGDKEVESGKVAVR 609


>gi|167034477|ref|YP_001669708.1| threonyl-tRNA synthetase [Pseudomonas putida GB-1]
 gi|189083619|sp|B0KKR8|SYT_PSEPG RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|166860965|gb|ABY99372.1| threonyl-tRNA synthetase [Pseudomonas putida GB-1]
          Length = 640

 Score =  637 bits (1644), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 290/636 (45%), Positives = 432/636 (67%), Gaps = 21/636 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS ++F    + +DVA SI   LAK  VA  ++GK+ D  D +  + +++IITP+
Sbjct: 4   ITLPDGSQRSFDHAVSVADVAASIGAGLAKATVAGKVDGKLVDACDLISNDATLQIITPK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  AV+ ++P  ++ IGP+I++GFYYD   E+PF+ +++A IEK+
Sbjct: 64  DEEGLEIIRHSCAHLVGHAVKQLYPTAKMVIGPVIDEGFYYDIAYERPFTPEDMAAIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M E+I +D   +K+     +  ++F+++ E YK+ ++E +P ++ + LY   E+ D+CRG
Sbjct: 124 MMELIEKDYDVVKKMTPRAEVIDVFKARGEDYKLRLVEDMPDEQAMGLYYHEEYVDMCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +T +  K FKL K++GAYWRGD+    L R+YGTAW  +++L  Y+  +EE+EKRD
Sbjct: 184 PHVPNT-RFLKAFKLTKLSGAYWRGDAKNEQLQRVYGTAWADKKQLAAYIQRIEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHL 304
           HRK+ +++DLFH+ E+  G++FWH  GW ++Q L  YMR   +++ Y+EI TPQV+D+ L
Sbjct: 243 HRKIGKQLDLFHLQEEAPGMVFWHANGWTVYQVLEQYMRGVQRENGYQEIKTPQVVDRIL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHW +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYR+LP+RLAE
Sbjct: 303 WERSGHWSNYAENMFT------TSSESRDYAVKPMNCPCHVQVFNQGLKSYRDLPLRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FG+ +RNEPSG+LHG+MRVRGF QDDAH+FCT+EQ+  E      L + +YKDFGF  I 
Sbjct: 357 FGACHRNEPSGALHGIMRVRGFVQDDAHIFCTEEQVKKEAADFIKLTLDVYKDFGFSDIA 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +KLSTRP KRVGS+ LWD AE  +   L+      +  +      GEGAFYGPK E+ L+
Sbjct: 417 MKLSTRPAKRVGSEELWDRAETALADALN------ESGLEWEYQPGEGAFYGPKIEFTLR 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D +GR+WQCGT+Q D NLP R +A Y+   + +  PVM+HRA+ GS ERFIG++IE++ G
Sbjct: 471 DCLGRNWQCGTLQYDPNLPERLDASYIAEDNSRVRPVMLHRAILGSFERFIGMLIEHYAG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P WL+P QA++  IT    ++A E+   L       ++D RNE I +KIREH++ K+P
Sbjct: 531 VFPAWLAPTQAVIMNITDKQADFALEVEKSLNGSGFRAKSDLRNEKIGFKIREHTLLKVP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
            +++ GD+E   +++ +R      T++ + L ++P+
Sbjct: 591 YLLVIGDREVETQTVAVR------TREGADLGSMPV 620


>gi|85375301|ref|YP_459363.1| threonyl-tRNA synthetase [Erythrobacter litoralis HTCC2594]
 gi|123293655|sp|Q2N6X5|SYT_ERYLH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|84788384|gb|ABC64566.1| threonyl-tRNA synthetase [Erythrobacter litoralis HTCC2594]
          Length = 672

 Score =  637 bits (1644), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 320/669 (47%), Positives = 433/669 (64%), Gaps = 25/669 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIE---I 61
           +K++ PDGS++     AT +DVA +I   LAK A+A  ++G+V DL+ P  EG  E   I
Sbjct: 5   LKISLPDGSVREMEAGATPADVAAAIGPGLAKAALAAKVDGEVRDLNRPF-EGDAELALI 63

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF---DKEQPFSSDE 118
            + ++  +L + RH  AH++AEAVQ++WP  Q+  GP  +DGFYYD    D   PF  D+
Sbjct: 64  TSRDEEEALELARHDYAHVLAEAVQALWPGTQITFGPATDDGFYYDVKAPDSRDPFGMDD 123

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L  IE+KM+EII  D P +++  S E+  E +E++ E +K E  + +P  E +T+Y  GE
Sbjct: 124 LPAIEEKMREIIKADKPLVREVWSREQLIEKWEAEGEVFKAEWAKELPEDEELTVYWSGE 183

Query: 179 ------WFDLCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQEL 231
                 W D+CRGPH+ STG++  + FKLM+VAGAYWRGD   P L+RIYGT W  +++L
Sbjct: 184 PGGEDSWLDMCRGPHLASTGKLDPQAFKLMRVAGAYWRGDQRNPQLTRIYGTGWLNKKQL 243

Query: 232 TQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-D 290
             +L+ LEE+ KRDHRKL REMDLFH+ E+  G +FWH +G+KI++ L +YMRRK+    
Sbjct: 244 NAHLHRLEEAAKRDHRKLGREMDLFHLQEEAHGSVFWHPQGYKIWRELEAYMRRKMDGAG 303

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAV-----KCADD---TIKDLRTFALKPMNCP 342
           Y EI TPQV+D   W+QSGHW  YR NMF +        D+     KD    ALKPMNCP
Sbjct: 304 YREIKTPQVMDARQWEQSGHWGKYRENMFVIPDEIPNTEDEGELVSKDADWMALKPMNCP 363

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN 402
            HV VF  G+ SYR+LP+RL E G  +RNEP G+LHGLMRVR FTQDDAH+FCT++Q+  
Sbjct: 364 AHVLVFKQGITSYRDLPIRLGEMGCCHRNEPHGALHGLMRVRQFTQDDAHIFCTEDQVVE 423

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
           E      L   +Y+DFGF+   VKL+ RPE+R GS+  WD AE  ++  +      + D 
Sbjct: 424 EVRAFCKLADEVYRDFGFD-YDVKLALRPEQRFGSEEDWDKAEQELRDAV-AEAGMANDD 481

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
                L GEGAFY PK E+ L DAIGR WQ GTIQ D  LP R +A YV     K  PVM
Sbjct: 482 YGWEELPGEGAFYAPKLEWHLTDAIGRTWQVGTIQGDRVLPERLDATYVGEDGGKHRPVM 541

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSI 582
           +HRA+FGS ERFIGI+IE+F G LP+WL+P QA+V TI S A  YA+E    L++  + +
Sbjct: 542 LHRAIFGSYERFIGILIEHFAGRLPVWLAPTQAVVATIVSDADGYAKEAVAKLEAAGIRV 601

Query: 583 ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           + D RNE IN+K+REHS+ K+P +++ G +EA E ++ +R  G    Q +SL DAI +L 
Sbjct: 602 DGDLRNEKINFKVREHSLAKVPHLLVVGKREAEEGTVAVRTLGEKEQQVMSLDDAIAMLK 661

Query: 643 KESLPPDCQ 651
             + PPD +
Sbjct: 662 DAATPPDLR 670


>gi|269139162|ref|YP_003295863.1| threonyl-tRNA synthetase [Edwardsiella tarda EIB202]
 gi|267984823|gb|ACY84652.1| threonyl-tRNA synthetase [Edwardsiella tarda EIB202]
 gi|304559086|gb|ADM41750.1| Threonyl-tRNA synthetase [Edwardsiella tarda FL6-60]
          Length = 642

 Score =  637 bits (1644), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 294/641 (45%), Positives = 436/641 (68%), Gaps = 16/641 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS ++F    +  D+A  I   LAK  +A  +NG++ D  D +  + ++ IIT +
Sbjct: 4   ITLPDGSQRHFDHPVSVMDIARDIGPGLAKACIAGRVNGELVDACDLIDADATVAIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   + ++RHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D +   + ++L +++K+
Sbjct: 64  DQEGVDILRHSCAHLLGHAIKQLWPQTKMAIGPVIDNGFYYDVDLDHTLTQEDLDRLDKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+  +D   +K+ +S ++AR+ F ++ E YKV IL E+I   +   LY   E+ D+CR
Sbjct: 124 MHELAEKDYDVIKRKVSWQEARDAFVARDEPYKVAILDENISHDDRPGLYHHEEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKL K +GAYWRGDS+  ML RIYGTAW  +++L  YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLQKSSGAYWRGDSDNKMLQRIYGTAWADKKQLNAYLQRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF+ L +++R K+K+  Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEAFVRMKLKEYQYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW++Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWENYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  FGFEKI
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDEVNSCIKMVYDMYSTFGFEKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+GSD +WD AE  +   L       ++ I      GEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEKRIGSDEIWDRAEEDLAAAL------QENGIPFEYQPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF+LP R +A YV  ++E+  PVMIHRA+ GS+ERFIGI+ E F 
Sbjct: 471 HDCLDRAWQCGTVQLDFSLPGRLSASYVGENNERVVPVMIHRAILGSMERFIGILTEEFA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+QA+V  IT S  EY +E++  L++  +  ++D RNE I +KIREH+++++
Sbjct: 531 GFFPTWLAPVQAVVMNITDSQAEYVEELSKKLQAAGIRAKSDLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P +++CGDKE     + +R         +S+ D I  L +E
Sbjct: 591 PYMLVCGDKEVEAGKVAVRTRRGKDLGVISIDDVIEKLQQE 631


>gi|77360339|ref|YP_339914.1| threonyl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
 gi|76875250|emb|CAI86471.1| threonyl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
          Length = 636

 Score =  637 bits (1643), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 300/641 (46%), Positives = 427/641 (66%), Gaps = 16/641 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPE 65
           +T PDGS ++F    +  DVA  I   LAK  +A  +NG+  D  D + E S +EIIT +
Sbjct: 4   ITLPDGSQRSFENPVSTLDVANDIGPGLAKATIAGRVNGERVDACDLISEDSRLEIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  AV+ ++P+ ++AIGP I++GFYYD D EQ  S D+L  IEK+
Sbjct: 64  DDDGLEIIRHSCAHLIGHAVKQLFPDAKMAIGPTIDNGFYYDIDMEQSLSQDDLDAIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M ++   +   +K+ +S ++AR++F ++ E YK+EIL E+I   +   LY   E+ D+CR
Sbjct: 124 MLQLAKTNYDVVKKTVSWQEARDVFAARGETYKIEILDENIAKDDRPGLYHHEEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +  + FK+MKVAGAYWRGDS   ML RIYGTAW  +++L  YL  LEE+EKR
Sbjct: 184 GPHVPNM-KFCQNFKIMKVAGAYWRGDSENKMLQRIYGTAWGDKKQLKAYLKRLEEAEKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHR++ + +DL+H  E+  G++FWH  GW I++ L  ++R K+++ DYEE+  P ++D+ 
Sbjct: 243 DHRRIGKALDLWHWQEEAPGMVFWHNDGWSIYRELEDFVREKLREYDYEEVKGPMMMDRS 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SGHW+ Y   MF       T+ + R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKSGHWEKYADAMFT------TVSEKREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFG  +RNEPSG+LHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++   Y+ FGFEKI
Sbjct: 357 EFGCCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQIMDEVSACIKMVYDTYETFGFEKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPE+R+G D +WD AE  +   L        + I    L GEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEQRIGEDHMWDKAELALAEALKL------NEIEFDYLPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF LP R  A YV  ++E+  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 YDCLDRAWQCGTVQLDFALPGRLGATYVAENNERRTPVMIHRAILGSIERFIGILTEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P Q ++  IT    +Y +E+   L    +    D RNE I +KIREH++K+I
Sbjct: 531 GLFPTWLAPKQVVIMNITDKQADYVKEVVQKLNKLGIRATADLRNEKIGFKIREHTLKRI 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P +++ GDKE  ++ + +R        K ++ D +  +++E
Sbjct: 591 PYLLVVGDKEVEQQEVAVRTRTGEDLGKFNVDDFVAKISEE 631


>gi|62179922|ref|YP_216339.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|168263848|ref|ZP_02685821.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|168463268|ref|ZP_02697199.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|73919823|sp|Q57PV3|SYT_SALCH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|62127555|gb|AAX65258.1| threonine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|195634423|gb|EDX52775.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|205347615|gb|EDZ34246.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|322714388|gb|EFZ05959.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. A50]
          Length = 642

 Score =  637 bits (1643), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 297/641 (46%), Positives = 429/641 (66%), Gaps = 16/641 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D  D +  + ++ IIT +
Sbjct: 4   ITLPDGSQRHYDHPVSPMDVALDIGPGLAKATIAGRVNGELVDACDLIENDATLAIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ +WP  ++AIGP++++GFYYD D ++  + +++  +EK+
Sbjct: 64  DEEGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVVDNGFYYDVDLDRTLTQEDVEALEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+  ++   +K+ +S   ARE F  + E YKV IL E+I   +   LY   E+ D+CR
Sbjct: 124 MHELAEKNYDVIKKKVSWHDARETFVKRGETYKVAILDENIAHDDKPGLYHHEEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKLMK AGAYWRGDSN  ML RIYGTAW  ++ L  YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLMKTAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF+ L  ++R K+K+  Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHWD+Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWDNYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  FGFEKI
Sbjct: 357 EFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQIRDEVNACIRMVYDMYSTFGFEKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRP+KR+GSD +WD AE  +   L+      ++ I     LGEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPDKRIGSDEMWDRAEADLAVALE------ENNIPFEYQLGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF+LPSR +A YV   +E+  PVMIHRA+ GS+ERFIGI+ E F 
Sbjct: 471 YDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+Q +V  IT S  EY  E+   L++  + ++ D RNE I +KIREH+++++
Sbjct: 531 GFFPTWLAPVQVVVMNITDSQSEYVNELTQKLQNAGIRVKADLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P +++CGDKE     + +R         + + D I  L +E
Sbjct: 591 PYMLVCGDKEVEAGKVAVRTRRGKDLGSLDVNDVIEKLQQE 631


>gi|307310711|ref|ZP_07590357.1| threonyl-tRNA synthetase [Escherichia coli W]
 gi|331647210|ref|ZP_08348304.1| threonine--tRNA ligase [Escherichia coli M605]
 gi|331673269|ref|ZP_08374037.1| threonine--tRNA ligase [Escherichia coli TA280]
 gi|281178789|dbj|BAI55119.1| threonyl-tRNA synthetase [Escherichia coli SE15]
 gi|306908889|gb|EFN39385.1| threonyl-tRNA synthetase [Escherichia coli W]
 gi|315061024|gb|ADT75351.1| threonyl-tRNA synthetase [Escherichia coli W]
 gi|315299748|gb|EFU58988.1| threonyl-tRNA synthetase [Escherichia coli MS 16-3]
 gi|323378405|gb|ADX50673.1| threonyl-tRNA synthetase [Escherichia coli KO11]
 gi|330911523|gb|EGH40033.1| threonyl-tRNA synthetase [Escherichia coli AA86]
 gi|331043993|gb|EGI16129.1| threonine--tRNA ligase [Escherichia coli M605]
 gi|331069467|gb|EGI40854.1| threonine--tRNA ligase [Escherichia coli TA280]
 gi|332343438|gb|AEE56772.1| threonyl-tRNA synthetase ThrS [Escherichia coli UMNK88]
          Length = 642

 Score =  637 bits (1643), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 295/619 (47%), Positives = 423/619 (68%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D  D +  +  + IIT +
Sbjct: 4   ITLPDGSQRHYDHAVSPMDVALDIGPGLAKACIAGRVNGELVDACDLIENDAQLSIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ +WP  ++AIGP+I++GFYYD D ++  + +++  +EK+
Sbjct: 64  DEEGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVIDNGFYYDVDLDRTLTQEDVEALEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+  ++   +K+ +S  +ARE F ++ E+YKV IL E+I   +   LY   E+ D+CR
Sbjct: 124 MHELAEKNYDVIKKKVSWHEARETFANRGESYKVSILDENIAHDDKPGLYFHEEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKLMK AGAYWRGDSN  ML RIYGTAW  ++ L  YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLMKTAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF+ L  ++R K+K+  Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHWD+Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWDNYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+ +E      L+  +Y  FGFEKI
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+GSD +WD AE  +   L+      ++ I     LGEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEKRIGSDEMWDRAEADLAVALE------ENNIPFEYQLGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF+LPSR +A YV   +E+  PVMIHRA+ GS+ERFIGI+ E F 
Sbjct: 471 YDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+Q ++  IT S  +Y  E+   L +  + ++ D RNE I +KIREH+++++
Sbjct: 531 GFFPTWLAPVQVVIMNITDSQSDYVNELTQKLSNAGIRVKADLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++CGDKE     + +R
Sbjct: 591 PYMLVCGDKEVESGKVAVR 609


>gi|78486008|ref|YP_391933.1| threonyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
 gi|123769059|sp|Q31F14|SYT_THICR RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|78364294|gb|ABB42259.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Thiomicrospira
           crunogena XCL-2]
          Length = 642

 Score =  637 bits (1643), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 294/642 (45%), Positives = 433/642 (67%), Gaps = 17/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPE 65
           +T PDGS + F    T   VA  I   LAK  +A  +NG++ + SD + E   +++IT +
Sbjct: 4   ITLPDGSKRAFEDAVTVMQVASDIGAGLAKATIAGRVNGQLKEASDLITEDAELQLITLK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L ++RHSCAH++  A++ ++P  ++AIGP++E+GFYYD D E+  + ++L QIEK+
Sbjct: 64  DEDGLHIMRHSCAHLLGHALKQLYPAAKMAIGPVVENGFYYDIDMEEKITPEDLKQIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+E+       +K+     +A   F+ ++E YKVE++E +P +    LY   E+ D+CRG
Sbjct: 124 MKELAKTKYEVIKEMTPRAEALATFKERQEDYKVELIEDMPDETEFGLYHHQEYIDMCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV + G +K F KL  VAGAYWRG+S+  ML RIYG A+  +QEL  YL  +EE+EKRD
Sbjct: 184 PHVPNMGFIKAF-KLTHVAGAYWRGNSDNKMLQRIYGVAFADKQELKDYLRMMEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHL 304
           HRKL + +DLFH+ E   G+ FWH KG  +++ + +YMR++ +++DY+EI TP ++D+ L
Sbjct: 243 HRKLGKSLDLFHVDELAPGMAFWHPKGSTLYRVVENYMRQQLVENDYQEIRTPLIMDRTL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHWD ++ NMF  +  +      R +A+KPMNCPGH+ V+NH L SYR+LP+RLAE
Sbjct: 303 WEKSGHWDKFKDNMFTTETEN------RDYAVKPMNCPGHIQVYNHNLSSYRDLPIRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FG V+RNEPSG+LHGLMRVR FTQDDAH+FCT EQ+  E     +L+ + Y DFGF+ I 
Sbjct: 357 FGLVHRNEPSGTLHGLMRVRSFTQDDAHIFCTPEQIKEEVQACIDLVFNTYADFGFDNIQ 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           VK STRPE+RVG D +WD AE  ++    T+K+++   +   +  GEGAFYGPK E+ LK
Sbjct: 417 VKFSTRPEQRVGEDDVWDLAEEALE---QTLKDAN---LEYALQPGEGAFYGPKIEFQLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPS--RFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           D IGR WQCGTIQ+DF++    R NA Y+ + +EK HPVMIHRA+ GS+ERF+GI++E++
Sbjct: 471 DCIGRVWQCGTIQLDFSMTQEERLNAVYIGADNEKHHPVMIHRAILGSLERFVGILVEHY 530

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
           +G  P WL+P Q ++ +I     EY  + A  LK H   +E+D RNE + +KIREH++++
Sbjct: 531 EGKFPTWLAPTQLVIASIADVHNEYVNDFAKKLKKHGFRVESDLRNEKVGFKIREHTLQR 590

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P I++ GD+E    ++ +R  G       S  + I  L+++
Sbjct: 591 VPYILVVGDQEMENGTVNVRARGGENLGSFSFEELIDHLSED 632


>gi|296114661|ref|ZP_06833313.1| threonyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769]
 gi|295978757|gb|EFG85483.1| threonyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769]
          Length = 603

 Score =  637 bits (1642), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 293/588 (49%), Positives = 404/588 (68%), Gaps = 15/588 (2%)

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           E +   D  +L++IRH  AH++A+AV  ++P   +A GP  E GF+YDF  E+ F+ D+L
Sbjct: 19  EPVFRSDADALSLIRHDTAHVLAQAVSELFPGTALATGPATEQGFFYDFAAERAFTDDDL 78

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IE +M EI+ RD P +++    E A    +   + YK EI+ S+P    ++ YRQG +
Sbjct: 79  VRIEARMHEIVDRDEPIIREEWKRESALAWCQENGQPYKAEIIRSLPLDAVLSFYRQGNF 138

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPH+ STGQ+   F+L+  AGAYW+GD N PML RI+GTA     EL  +    E
Sbjct: 139 VDLCRGPHLGSTGQIGHEFRLLGTAGAYWKGDRNNPMLQRIHGTACRDANELAAWERRQE 198

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQ 298
           E+ +RDHR+L REMDLFH   +  G +FWH  GW +FQTL++Y+R R+  ++Y EINTP 
Sbjct: 199 EAARRDHRRLGREMDLFHFQPEAPGAVFWHPNGWTLFQTLLAYLRARQQAENYVEINTPD 258

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D  LWQ SGHW+ +  NMF       T  + RT+ALKPMNCPG V VF HGLKSYR+L
Sbjct: 259 IMDLSLWQASGHWEKFGENMFT------TETEGRTYALKPMNCPGGVQVFRHGLKSYRDL 312

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG V+R EPSG+LHGLMRVR FTQDDAH+FCT EQM  E  +I +L++SIYKDF
Sbjct: 313 PLRMAEFGKVHRFEPSGALHGLMRVRAFTQDDAHIFCTPEQMEAETQRICHLVLSIYKDF 372

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIM-KGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           GF+ + +K S RPEKRVGSD +WD +E  + +GV  +  + +++        GEGAFYGP
Sbjct: 373 GFDDVRIKFSDRPEKRVGSDEIWDRSEEALRRGVEASGLSYTRNP-------GEGAFYGP 425

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E++L+DAIGRDWQCGT+QVD NLP R +A Y+ +  +K  PVM+HRA+FGS+ERFIGI
Sbjct: 426 KLEFVLRDAIGRDWQCGTVQVDLNLPQRLDAHYIGADGDKHPPVMLHRALFGSLERFIGI 485

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           ++E+  G+LP WL+P+Q +V TIT++A  YA ++   L+   + +  D RNE I YK+RE
Sbjct: 486 LLEHHAGHLPFWLAPVQVVVATITAAADNYADDLIKALRQRGVRVVPDLRNEKIAYKVRE 545

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           HS+ K+P+++I G KEA   ++ IR +GS  T  ++   AI +L   S
Sbjct: 546 HSLAKVPVLLIVGKKEAEAGTVSIREYGSPDTPTIATETAIDLLASAS 593


>gi|330810593|ref|YP_004355055.1| Threonine--tRNA ligase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327378701|gb|AEA70051.1| Threonine--tRNA ligase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 640

 Score =  637 bits (1642), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 293/642 (45%), Positives = 435/642 (67%), Gaps = 24/642 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP+   +T PDGS ++F    + ++VA SI   LAK  +A  +NGK+ D SD +  + ++
Sbjct: 1   MPT---ITLPDGSQRSFDHPVSVAEVAASIGAGLAKATLAGKVNGKLVDASDVIDSDATL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           +IITP+D   L +IRHSCAH++  AV+ ++P  ++ IGP+I++GFYYD   E+PF+ +++
Sbjct: 58  QIITPKDEEGLEIIRHSCAHLVGHAVKQLYPSAKMVIGPVIDEGFYYDIAFERPFTPEDM 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A IE++MQ++I +D   +K+     +  E+F+++ E YK+ ++E +P ++ + LY   E+
Sbjct: 118 AAIEQRMQQLIEKDYDVIKKVTPRAEVIEVFKARGEDYKLRLVEDMPDEQAMGLYYHEEY 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            D+CRGPHV +T +  K FKL K++GAYWRGD+    L R+YGTAW  +++L  Y+  +E
Sbjct: 178 VDMCRGPHVPNT-RFLKSFKLTKLSGAYWRGDAKNEQLQRVYGTAWADKKQLAAYIQRIE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQ 298
           E+EKRDHRK+ + + LFH  E+  G++FWH  GW ++Q L  YMR+  +++ Y EI TPQ
Sbjct: 237 EAEKRDHRKIGKRLGLFHTQEESPGMVFWHPNGWTLYQVLEQYMRQVQRENGYLEIKTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHW +Y  NMF  +  +      R +A+KPMNCP HV VFN GLKSYREL
Sbjct: 297 VVDRSLWEKSGHWANYADNMFTTQSEN------RDYAIKPMNCPCHVQVFNQGLKSYREL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFG+ +RNEPSG+LHG+MRVR FTQDDAH+FCT+EQM  E      L + +Y+DF
Sbjct: 351 PMRLAEFGACHRNEPSGALHGIMRVRAFTQDDAHIFCTEEQMQAESAAFIKLTMDVYRDF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF ++ +KLSTRPEKRVGSD LWD      +             +   +  GEGAFYGPK
Sbjct: 411 GFTEVEMKLSTRPEKRVGSDELWD------RAEAALAAALDSAGLAYDLQPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD +GR WQCGT+Q+DFNLP R  A YV+  + + HPVM+HRA+ GS ERF+GI+
Sbjct: 465 IEFSLKDCLGRVWQCGTLQLDFNLPIRLGAEYVSEDNSRKHPVMLHRAILGSFERFVGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+++G  P WL+P QA++  IT    ++A E+   L       ++D RNE I +KIREH
Sbjct: 525 IEHYEGAFPAWLAPTQAVIMNITDKQADFAAEVEKTLNQSGFRAKSDLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
           ++ K+P +++ GD+E   +++ +R      T++ + L ++P+
Sbjct: 585 TLLKVPFLLVIGDREVEMQTVAVR------TREGADLGSMPV 620


>gi|237731269|ref|ZP_04561750.1| threonyl-tRNA synthetase [Citrobacter sp. 30_2]
 gi|226906808|gb|EEH92726.1| threonyl-tRNA synthetase [Citrobacter sp. 30_2]
          Length = 642

 Score =  637 bits (1642), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 294/619 (47%), Positives = 424/619 (68%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS +++    +  DVA  I   LAK  +A  ++G++ D SD +  +  + IIT +
Sbjct: 4   ITLPDGSQRHYDHAVSPMDVALDIGPGLAKATIAGRVDGELVDASDLIEHDAKLSIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ +WP  ++AIGP++++GFYYD D ++  + +++  +EK+
Sbjct: 64  DEEGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVVDNGFYYDIDLDRTLTQEDVDALEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+  ++   +K+ +S  +ARE F  + E YKV IL E+I   +   LY   E+ D+CR
Sbjct: 124 MHELAEKNYDVIKKKVSWYEARETFVKRGETYKVSILDENIAHDDKPGLYHHEEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKLMK AGAYWRGDSN  ML RIYGTAW  ++ L  YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLMKTAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF+ L  ++R K+K+  Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHWD+Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWDNYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  FGFEKI
Sbjct: 357 EFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQIRDEVNACIRMVYDMYSTFGFEKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+GSD +WD AE  +   L+      ++ I     LGEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEKRIGSDEMWDRAEADLAVALE------ENNIPFEFQLGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF+LPSR +A YV  ++E+  PVMIHRA+ GS+ERFIGI+ E F 
Sbjct: 471 YDCLDRAWQCGTVQLDFSLPSRLSASYVGENNERQVPVMIHRAILGSMERFIGILTEEFA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+Q +V  IT S  EY  E+   L++  + ++ D RNE I +KIREH+++++
Sbjct: 531 GFFPTWLAPVQVVVMNITDSQSEYVNELTQKLQNAGIRVKADLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++CGDKE     + +R
Sbjct: 591 PYMLVCGDKEVEAGKVAVR 609


>gi|302063985|ref|ZP_07255526.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. tomato K40]
          Length = 590

 Score =  637 bits (1642), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 296/606 (48%), Positives = 420/606 (69%), Gaps = 18/606 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP+   +T PDGS ++F    + +DVA SI   LAK  VA  ++GK+ D  D +  + S+
Sbjct: 1   MPT---ITLPDGSQRSFDHAVSVADVALSIGAGLAKATVAGKVDGKLVDACDLIENDASL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           +IITP+D   L +IRHSCAH++  AV+ ++P  ++ IGP+I+DGFYYD   E+PF+ D+L
Sbjct: 58  QIITPKDAEGLEIIRHSCAHLVGHAVKQLYPTAKMVIGPVIDDGFYYDIAYERPFTPDDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A IE++MQ++I +D   +K+     +  E+F ++ E YK+ ++E +P ++ + LY   E+
Sbjct: 118 AAIEQRMQQLIEKDYDVIKKVTPRAEVIEVFTARHEDYKLRLVEGMPDEQAMGLYYHEEY 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            D+CRGPHV +T +  K FKL K++GAYWRGD+    L R+YGTAW  +++L  Y+  +E
Sbjct: 178 VDMCRGPHVPNT-RFLKSFKLTKLSGAYWRGDAKNEQLQRVYGTAWADKKQLAAYIQRIE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQ 298
           E+EKRDHRK+ + + LFH  E+  G++FWH +GW ++Q L  YMR+  +++ Y EI TPQ
Sbjct: 237 EAEKRDHRKIGKRLGLFHTQEEAPGMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHW +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYREL
Sbjct: 297 VVDRSLWEKSGHWANYADNMFT------TQSESRDYAIKPMNCPCHVQVFNQGLKSYREL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFG+ +RNEPSG+LHG+MRVRGFTQDDAH+FCT++QM  E      L + +Y DF
Sbjct: 351 PLRLAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEDQMQAESAAFIKLTLDVYADF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+ I +KLSTRPEKRVGSD LWD AE+ +   LD+        +   +  GEGAFYGPK
Sbjct: 411 GFKDIELKLSTRPEKRVGSDELWDRAESALASALDSAG------LPYDLQPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD +GR WQCGT+Q+DFNLP R +A YV+  + + +PVM+HRA+ GS ERFIGI+
Sbjct: 465 IEFSLKDCLGRVWQCGTLQLDFNLPIRLSAEYVSEDNSRKNPVMLHRAILGSFERFIGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+++G  P WL+P QA++  IT    ++A E+   L       ++D RNE I +KIREH
Sbjct: 525 IEHYEGAFPAWLAPTQAVIMNITDKQADFALEVEKTLAESGFRAKSDLRNEKIGFKIREH 584

Query: 599 SIKKIP 604
           ++ K+P
Sbjct: 585 TLLKVP 590


>gi|15837338|ref|NP_298026.1| threonyl-tRNA synthetase [Xylella fastidiosa 9a5c]
 gi|22654146|sp|Q9PFE2|SYT_XYLFA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|9105624|gb|AAF83546.1|AE003915_11 threonyl-tRNA synthetase [Xylella fastidiosa 9a5c]
          Length = 635

 Score =  637 bits (1642), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 295/622 (47%), Positives = 421/622 (67%), Gaps = 17/622 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAING-KVCDLSDPV-REGSIEII 62
           I +T PDGS + F    +   VA +I   LAK  +A  I+G  + D SD +  +  + II
Sbjct: 2   ITITLPDGSRREFEGPVSVMQVAHAIGPGLAKATIAGQIDGGHLVDASDLIEHDAMLRII 61

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TPED  +L +IRHSCAH++  AV+ ++PE ++ IGP+I DGFYYD   ++PF+ ++LA I
Sbjct: 62  TPEDQEALDIIRHSCAHLVGHAVKQLYPEAKMVIGPVIADGFYYDIYSKRPFTPEDLAAI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESI-PAKENVTLYRQGEWFD 181
           E++M E+IA+D   +K   +      LF+ + E YK+ ++E + P    + +Y   E+ D
Sbjct: 122 EQRMVELIAQDYHVVKHITARHDVVRLFKERGEDYKLRLIEEMGPEVTAMGIYHHQEYVD 181

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           +CRGPHV +T +  K FKL +++GAYWRGD+    L RIYGTAW  +++L  ++  L+++
Sbjct: 182 MCRGPHVPNT-RFLKAFKLTRISGAYWRGDTKNEQLQRIYGTAWADKKQLEAHMQRLQDA 240

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVL 300
           EKRDHRK+ +  DLFH+ E+G G++FWH KGW I+QT+ +Y+RR  ++  Y E+  PQ+L
Sbjct: 241 EKRDHRKIGKVQDLFHLQEEGPGLVFWHPKGWVIWQTIENYIRRVYRNSGYGELRCPQIL 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D  LWQ+SGHWD+Y+ NMF       T  + RT+A+KPMNCPGHV VFN GL SYR+LP+
Sbjct: 301 DVSLWQKSGHWDNYKENMFF------TDSEKRTYAVKPMNCPGHVQVFNQGLHSYRDLPI 354

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R  EFG+ +RNEPSG+LHGL+RVRGFTQDD H+FCT+ Q+ +E    H   + +Y DFGF
Sbjct: 355 RYGEFGACHRNEPSGALHGLLRVRGFTQDDGHIFCTEAQIESEVTAFHRQALQVYADFGF 414

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           E I +K++ RP+KR+G    WD AE  ++  L   +   Q+      L GEGAFYGPK E
Sbjct: 415 EDIQIKIALRPDKRLGDSLSWDKAEAALRAALSACEVEWQE------LPGEGAFYGPKIE 468

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           Y LKDAIGR WQ GTIQVDF +P R  A YV+  S++CHPVM+HRA+ GS+ERFIGI+IE
Sbjct: 469 YHLKDAIGRTWQLGTIQVDFMMPGRLGAEYVDERSQRCHPVMLHRAIVGSMERFIGILIE 528

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           ++ G  P WL+P+Q +V  IT +  EYA+ +   L +    + TD RNE I YKIREH++
Sbjct: 529 HYAGIWPTWLAPVQVVVANITDAQYEYAERVHKALLNQGFRVNTDLRNEKIGYKIREHTL 588

Query: 601 KKIPIIIICGDKEASERSIGIR 622
           +++P +++ GD+E    ++ +R
Sbjct: 589 QRVPYLLVVGDREKENGTVAVR 610


>gi|284006267|emb|CBA71503.1| threonyl-tRNA synthetase [Arsenophonus nasoniae]
          Length = 640

 Score =  637 bits (1642), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 289/619 (46%), Positives = 427/619 (68%), Gaps = 18/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS + +    +  D+A  I   LAK  +A  +NG++ D +D + ++  + IIT +
Sbjct: 4   ITLPDGSQRQYEHAVSVMDIANDIGSGLAKACIAGRVNGELVDANDQINKDAQLAIITSK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ +WP  ++AIGPIIE+GFYYD D E   + ++L ++E++
Sbjct: 64  DLEGLEIIRHSCAHLLGHAIKQLWPTTKMAIGPIIENGFYYDVDLEHALTQEDLEKLEQR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+  ++   +K+ +S ++AR+ F ++ E YKV+IL E+I   ++  LY   E+ D+CR
Sbjct: 124 MHELAEKNYDVIKKRVSWQEARDTFVARGEDYKVKILDENINKDDHPRLYYHEEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +   +FKL KVAGAYWRG+S+  ML RIYGTAW  +++L  YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHYFKLQKVAGAYWRGNSDNKMLQRIYGTAWANKKQLAAYLLRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G+ FWH  GW IF+ L +++R K+ +  Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMAFWHNDGWVIFRELETFIRTKLNEYRYQEVKGPLMMDRI 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW++Y+ NMF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWENYKENMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT++Q+  E      +I  +Y  FGFEKI
Sbjct: 357 EFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEDQILTEVKSCIKMIYHVYATFGFEKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPEKR+G+DA WD AE+ +   L  I+   Q         GEGAFYGPK E+ L
Sbjct: 417 AVKLSTRPEKRIGTDAQWDRAESDLAKALGDIEFDYQP--------GEGAFYGPKIEFTL 468

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF+LPSR  A YV+ ++E+  PVMIHRAV GS+ERFIGI+ E + 
Sbjct: 469 YDCLDRAWQCGTVQLDFSLPSRLGASYVDENNERQVPVMIHRAVLGSLERFIGILTEQYA 528

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+Q ++  IT +  ++ Q++   L +  + ++ D RNE I +KIREH+++++
Sbjct: 529 GFFPTWLAPLQIVIINITDAQADFVQKVVKKLSNFGIRVKADLRNEKIGFKIREHTLRRV 588

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++CGDKE     + +R
Sbjct: 589 PYMLVCGDKEVESNQVSVR 607


>gi|157158126|ref|YP_001463015.1| threonyl-tRNA synthetase [Escherichia coli E24377A]
 gi|157161181|ref|YP_001458499.1| threonyl-tRNA synthetase [Escherichia coli HS]
 gi|170019932|ref|YP_001724886.1| threonyl-tRNA synthetase [Escherichia coli ATCC 8739]
 gi|193068904|ref|ZP_03049863.1| threonyl-tRNA synthetase [Escherichia coli E110019]
 gi|209919078|ref|YP_002293162.1| threonyl-tRNA synthetase [Escherichia coli SE11]
 gi|218695280|ref|YP_002402947.1| threonyl-tRNA synthetase [Escherichia coli 55989]
 gi|256018088|ref|ZP_05431953.1| threonyl-tRNA synthetase [Shigella sp. D9]
 gi|332279130|ref|ZP_08391543.1| threonyl-tRNA synthetase [Shigella sp. D9]
 gi|166987321|sp|A7ZMI6|SYT_ECO24 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|166987322|sp|A8A0R2|SYT_ECOHS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|189083607|sp|B1IPK9|SYT_ECOLC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|238065113|sp|B6IBD7|SYT_ECOSE RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|254783522|sp|B7L6J2|SYT_ECO55 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|157066861|gb|ABV06116.1| threonyl-tRNA synthetase [Escherichia coli HS]
 gi|157080156|gb|ABV19864.1| threonyl-tRNA synthetase [Escherichia coli E24377A]
 gi|169754860|gb|ACA77559.1| threonyl-tRNA synthetase [Escherichia coli ATCC 8739]
 gi|192957699|gb|EDV88143.1| threonyl-tRNA synthetase [Escherichia coli E110019]
 gi|209912337|dbj|BAG77411.1| threonyl-tRNA synthase [Escherichia coli SE11]
 gi|218352012|emb|CAU97745.1| threonyl-tRNA synthetase [Escherichia coli 55989]
 gi|320197902|gb|EFW72510.1| Threonyl-tRNA synthetase [Escherichia coli EC4100B]
 gi|323948091|gb|EGB44082.1| threonyl-tRNA synthetase [Escherichia coli H120]
 gi|324016472|gb|EGB85691.1| threonyl-tRNA synthetase [Escherichia coli MS 117-3]
 gi|332101482|gb|EGJ04828.1| threonyl-tRNA synthetase [Shigella sp. D9]
          Length = 642

 Score =  637 bits (1642), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 295/619 (47%), Positives = 423/619 (68%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D  D +  +  + IIT +
Sbjct: 4   ITLPDGSQRHYDHAVSPMDVALDIGPGLAKACIAGRVNGELVDACDLIENDAQLSIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ +WP  ++AIGP+I++GFYYD D ++  + +++  +EK+
Sbjct: 64  DEDGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVIDNGFYYDVDLDRTLTQEDVEALEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+  ++   +K+ +S  +ARE F ++ E+YKV IL E+I   +   LY   E+ D+CR
Sbjct: 124 MHELAEKNYDVIKKKVSWHEARETFANRGESYKVSILDENIAHDDKPGLYFHEEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKLMK AGAYWRGDSN  ML RIYGTAW  ++ L  YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLMKTAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF+ L  ++R K+K+  Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHWD+Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWDNYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+ +E      L+  +Y  FGFEKI
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+GSD +WD AE  +   L+      ++ I     LGEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEKRIGSDEMWDRAEADLAVALE------ENNIPFEYQLGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF+LPSR +A YV   +E+  PVMIHRA+ GS+ERFIGI+ E F 
Sbjct: 471 YDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+Q ++  IT S  +Y  E+   L +  + ++ D RNE I +KIREH+++++
Sbjct: 531 GFFPTWLAPVQVVIMNITDSQSDYVNELTQKLSNAGIRVKADLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++CGDKE     + +R
Sbjct: 591 PYMLVCGDKEVESGKVAVR 609


>gi|331663198|ref|ZP_08364108.1| threonine--tRNA ligase [Escherichia coli TA143]
 gi|331683225|ref|ZP_08383826.1| threonine--tRNA ligase [Escherichia coli H299]
 gi|331058997|gb|EGI30974.1| threonine--tRNA ligase [Escherichia coli TA143]
 gi|331079440|gb|EGI50637.1| threonine--tRNA ligase [Escherichia coli H299]
          Length = 642

 Score =  636 bits (1641), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 295/619 (47%), Positives = 423/619 (68%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D  D +  +  + IIT +
Sbjct: 4   ITLPDGSQRHYDHAVSPMDVALDIGPGLAKACIAGRVNGELVDACDLIENDAQLSIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ +WP  ++AIGP+I++GFYYD D ++  + +++  +EK+
Sbjct: 64  DEEGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVIDNGFYYDVDLDRTLTQEDVEALEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+  ++   +K+ +S  +ARE F ++ E+YKV IL E+I   +   LY   E+ D+CR
Sbjct: 124 MHELAEKNYDVIKKKVSWHEARETFANRGESYKVSILDENIAHDDKPGLYFHEEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKLMK AGAYWRGDSN  ML RIYGTAW  ++ L  YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLMKTAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF+ L  ++R K+K+  Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRTKLKEYQYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW++Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWENYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+ +E      L+  +Y  FGFEKI
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+GSD +WD AE  +   L+      ++ I     LGEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEKRIGSDEMWDRAEADLAVALE------ENNIPFEYQLGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF+LPSR +A YV   +E+  PVMIHRA+ GS+ERFIGI+ E F 
Sbjct: 471 YDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+Q ++  IT S  EY  E+   L +  + ++ D RNE I +KIREH+++++
Sbjct: 531 GFFPTWLAPVQVVIMNITDSQSEYVNELTQKLSNAGIRVKADLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++CGDKE     + +R
Sbjct: 591 PYMLVCGDKEVESGKVAVR 609


>gi|239993779|ref|ZP_04714303.1| threonyl-tRNA synthetase [Alteromonas macleodii ATCC 27126]
          Length = 638

 Score =  636 bits (1641), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 301/641 (46%), Positives = 421/641 (65%), Gaps = 16/641 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS + F    +  DVA  I   LAK  +A  +NG++ D  D +  +  ++IIT +
Sbjct: 4   ITLPDGSQRAFDNAVSVLDVANDIGPGLAKATIAGKVNGELVDAVDMIDADAQLQIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L ++RHSCAH++  A++ +WP  ++AIGP+I++GFYYD D E+  + ++LA++EK+
Sbjct: 64  DDEGLEILRHSCAHLLGHAIKQLWPNTKMAIGPVIDNGFYYDVDMEESLTQEDLAKLEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K  +S  +AR+ FE++ E+YK+EIL E+I   +   LY   E+ D+CR
Sbjct: 124 MLELAKTNYDVVKNKVSWREARDAFEARGESYKMEILDENISKDDRPALYHHEEYTDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKLMKVAGAYWRGDS+  ML RIYGTAW  +++L  YL  LEE+EKR
Sbjct: 184 GPHVPNM-KFCHHFKLMKVAGAYWRGDSDNKMLQRIYGTAWADKKQLKSYLQRLEEAEKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ + ++LFH  E+  G++FWH  GW I+  L SY+R+K+++  Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKALNLFHWQEEAPGMVFWHNDGWSIYTELESYVRKKLREYGYDEVKGPLMMDRS 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SGHWD Y  NMF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKSGHWDKYAENMFT------TESEKREYAVKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFG  +RNEPSG+LHGLMRVRGFTQDDAH+FCT+EQ+  E      ++   Y  FGFE I
Sbjct: 357 EFGCCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQILEEVSGCIKMVYETYAAFGFENI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPEKRVG+D +WD +E  +   L        + I      GEGAFYGPK E+ L
Sbjct: 417 KVKLSTRPEKRVGADEIWDKSEAALADALKA------NDIEFDYQPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF++P R  + YV    E+  PVMIHRA+ GS+ERFIGI+ E F 
Sbjct: 471 HDCLDRAWQCGTVQLDFSMPGRLGSTYVAEDGERKVPVMIHRAILGSLERFIGILTEEFA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  PLWL+P Q +V  IT    EYA +    L+      ++D RNE I +KIREH++K+I
Sbjct: 531 GFFPLWLAPQQVVVMNITDKQAEYASDCVKKLQELGFRAKSDLRNEKIGFKIREHTLKRI 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P +++ GDKE     + +R        K+ L D I +  +E
Sbjct: 591 PYMLVVGDKEMEAGEVAVRSRRGDDLGKMRLEDFIAMAQQE 631


>gi|300924761|ref|ZP_07140703.1| threonyl-tRNA synthetase [Escherichia coli MS 182-1]
 gi|300419049|gb|EFK02360.1| threonyl-tRNA synthetase [Escherichia coli MS 182-1]
          Length = 642

 Score =  636 bits (1641), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 295/619 (47%), Positives = 423/619 (68%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D  D +  +  + IIT +
Sbjct: 4   ITLPDGSQRHYDHAVSLMDVALDIGPGLAKACIAGRVNGELVDACDLIENDAQLSIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ +WP  ++AIGP+I++GFYYD D ++  + +++  +EK+
Sbjct: 64  DEDGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVIDNGFYYDVDLDRTLTQEDVEALEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+  ++   +K+ +S  +ARE F ++ E+YKV IL E+I   +   LY   E+ D+CR
Sbjct: 124 MHELAEKNYDVIKKKVSWHEARETFANRGESYKVSILDENIAHDDKPGLYFHEEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKLMK AGAYWRGDSN  ML RIYGTAW  ++ L  YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLMKTAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF+ L  ++R K+K+  Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHWD+Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWDNYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+ +E      L+  +Y  FGFEKI
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+GSD +WD AE  +   L+      ++ I     LGEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEKRIGSDEMWDRAEADLAVALE------ENNIPFEYQLGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF+LPSR +A YV   +E+  PVMIHRA+ GS+ERFIGI+ E F 
Sbjct: 471 YDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+Q ++  IT S  +Y  E+   L +  + ++ D RNE I +KIREH+++++
Sbjct: 531 GFFPTWLAPVQVVIMNITDSQSDYVNELTQKLSNAGIRVKADLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++CGDKE     + +R
Sbjct: 591 PYMLVCGDKEVQSGKVAVR 609


>gi|82777067|ref|YP_403416.1| threonyl-tRNA synthetase [Shigella dysenteriae Sd197]
 gi|123755748|sp|Q32FI0|SYT_SHIDS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|81241215|gb|ABB61925.1| threonine tRNA synthetase [Shigella dysenteriae Sd197]
          Length = 642

 Score =  636 bits (1641), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 295/619 (47%), Positives = 423/619 (68%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPE 65
           +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D  D +   + + IIT +
Sbjct: 4   ITLPDGSQRHYDHAVSPMDVALDIGPGLAKACIAGRVNGELVDACDLIENDTQLSIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ +WP  ++AIGP+I++GFYYD D ++  + +++  +EK+
Sbjct: 64  DEEGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVIDNGFYYDVDLDRTLTQEDVEALEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+  ++   +K+ +S  +ARE F ++ E+YKV IL E+I   +   LY   E+ D+CR
Sbjct: 124 MHELAEKNYDVIKKKVSWHEARETFANRGESYKVSILDENIAHDDKPGLYFHEEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKLMK AGAYWRGDSN  ML RIYGTAW  ++ L  YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLMKTAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF+ L  ++R K+K+  Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHWD+Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWDNYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+ +E      L+  +Y  FGFEKI
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+GSD +WD AE  +   L+      ++ I     LGEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEKRIGSDEMWDRAEADLAVALE------ENNIPFEYQLGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF+LPSR +A YV   +E+  PVMIHRA+ GS+ERFIGI+ E F 
Sbjct: 471 YDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+Q ++  IT S  +Y  E+   L +  + ++ D RNE I +KIREH+++++
Sbjct: 531 GFFPTWLAPVQVVIMNITDSQSDYVNELTQKLSNAGIRVKADLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++CGDKE     + +R
Sbjct: 591 PYMLVCGDKEVESGKVAVR 609


>gi|325276812|ref|ZP_08142513.1| threonyl-tRNA synthetase [Pseudomonas sp. TJI-51]
 gi|324098050|gb|EGB96195.1| threonyl-tRNA synthetase [Pseudomonas sp. TJI-51]
          Length = 640

 Score =  636 bits (1640), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 290/636 (45%), Positives = 431/636 (67%), Gaps = 21/636 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS ++F    + +DVA SI   LAK  VA  ++GK+ D  D +  + +++IITP+
Sbjct: 4   ITLPDGSQRSFDHAVSVADVAASIGAGLAKATVAGKVDGKLVDACDLISHDATLQIITPK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  AV+ ++P  ++ IGP+I++GFYYD   E+PF+ ++LA IEK+
Sbjct: 64  DAEGLEIIRHSCAHLVGHAVKQLYPTAKMVIGPVIDEGFYYDIAYERPFTPEDLAAIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M E+I +D   +K+     +  ++F ++ E YK+ ++E +P ++ + LY   E+ D+CRG
Sbjct: 124 MMELIDKDYDVVKKVTPRAEVIDVFTARGEDYKLRLVEDMPDEQAMGLYYHEEYVDMCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +T +  K FKL K++GAYWRGD+    L R+YGTAW  +++L  Y+  +EE+EKRD
Sbjct: 184 PHVPNT-RFLKAFKLTKLSGAYWRGDAKNEQLQRVYGTAWADKKQLAAYIQRIEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHL 304
           HRK+ +++DLFH+ E+  G++FWH  GW ++Q L  YMR   +++ Y+EI TPQV+D+ L
Sbjct: 243 HRKIGKQLDLFHLQEEAPGMVFWHANGWTVYQVLEQYMRGVQRENGYQEIKTPQVVDRIL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHW +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYR+LP+RLAE
Sbjct: 303 WERSGHWSNYAENMFT------TSSESRDYAVKPMNCPCHVQVFNQGLKSYRDLPLRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FG+ +RNEPSG+LHG+MRVRGF QDDAH+FCT+EQ+  E      L + +YKDFGF  I 
Sbjct: 357 FGACHRNEPSGALHGIMRVRGFVQDDAHIFCTEEQVKKEAADFIKLTLDVYKDFGFSDIA 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +KLSTRP KRVGS+ LWD AE  +   L+      +  +      GEGAFYGPK E+ L+
Sbjct: 417 MKLSTRPAKRVGSEELWDRAEGALADALN------ESGLEWEYQPGEGAFYGPKIEFTLR 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D +GR+WQCGT+Q D NLP R +A Y+   + +  PVM+HRA+ GS ERFIG++IE++ G
Sbjct: 471 DCLGRNWQCGTLQYDPNLPERLDASYIAEDNSRVRPVMLHRAILGSFERFIGMLIEHYAG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P WL+P QA++  IT    ++A ++   L       ++D RNE I +KIREH++ K+P
Sbjct: 531 VFPAWLAPTQAVIMNITDKQADFALQVEKSLNGSGFRAKSDLRNEKIGFKIREHTLLKVP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
            +++ GD+E   +++ +R      T++ + L ++P+
Sbjct: 591 YLLVIGDREVETQTVAVR------TREGADLGSMPV 620


>gi|327481051|gb|AEA84361.1| threonyl-tRNA synthetase [Pseudomonas stutzeri DSM 4166]
          Length = 640

 Score =  636 bits (1640), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 291/624 (46%), Positives = 425/624 (68%), Gaps = 18/624 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP+   +T PDGS ++F    T ++VA+SI   LAK  +A  ++GK+ D  D + R+ S+
Sbjct: 1   MPT---ITLPDGSQRSFDHPVTVAEVAQSIGAGLAKATLAGKVDGKLVDACDLIERDASL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           +IITP+D   L +IRHSCAH++  AV+ ++P  ++ IGP+I++GFYYD   ++PF+ +++
Sbjct: 58  QIITPKDEEGLEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIDEGFYYDIAIDRPFTPEDM 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A IEK+M E+I +D   +K+     +  E+F S+ E YK+ +++ +P ++ + LY   E+
Sbjct: 118 AAIEKRMAELIDKDYDVIKKVTPRAEVIEVFTSRGEDYKLRLVDDMPDEQAMGLYYHEEY 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            D+CRGPHV +T +  K FKL +++GAYWRGDS    L RIYGTAW  +++L  Y+  +E
Sbjct: 178 VDMCRGPHVPNT-RFLKAFKLTRISGAYWRGDSKNEQLQRIYGTAWADKKQLAAYIQRIE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQ 298
           E+EKRDHR++ +++DLFH  E+  G++FWH  GW ++Q L  YMR+  +++ Y+E+ TPQ
Sbjct: 237 EAEKRDHRRIGKQLDLFHTQEEAPGMVFWHPAGWTLYQNLEQYMRQVQRENGYQEVRTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHW +Y  NMF       T  + R +A+KPMNCP HV +FN GLKSYR+L
Sbjct: 297 VVDRILWEKSGHWSNYAENMFT------TSSENRDYAVKPMNCPCHVQIFNQGLKSYRDL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG+ +RNEPSG+LHG+MRVRGFTQDDAH+FCT+EQ+  E      L + +Y DF
Sbjct: 351 PLRMAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEEQVKKEAADFIKLTLKVYADF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF  I +KLSTRP KRVGSD LWD AE+ +   L+      +  +      GEGAFYGPK
Sbjct: 411 GFSDIAMKLSTRPAKRVGSDELWDRAESALAEALN------ESGLAWEYQPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ L+D +GR+WQCGT+Q D NLP R +A YV   + +  PVM+HRA+ GS ERFIG++
Sbjct: 465 IEFTLRDCLGRNWQCGTLQYDPNLPERLDASYVAEDNSRQRPVMLHRAILGSFERFIGML 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE++ G  P WL+P QA++  IT     +A E+   L       + D RNE I +KIREH
Sbjct: 525 IEHYAGAFPAWLAPTQAVIMNITDKQAAFAIEVEKTLVQSGFRAKCDLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIR 622
           ++ K P +++ GD+E   RS+ +R
Sbjct: 585 TLLKTPYLLVIGDREVETRSVAVR 608


>gi|271500480|ref|YP_003333505.1| threonyl-tRNA synthetase [Dickeya dadantii Ech586]
 gi|270344035|gb|ACZ76800.1| threonyl-tRNA synthetase [Dickeya dadantii Ech586]
          Length = 642

 Score =  636 bits (1640), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 294/640 (45%), Positives = 434/640 (67%), Gaps = 19/640 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D  D +  +  + IIT +
Sbjct: 4   ITLPDGSQRHYDHAVSPLDVALDIGPGLAKACIAGRVNGELVDAVDVIESDAQLAIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   + +IRHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D E   + ++L  +EK+
Sbjct: 64  DDVGMEIIRHSCAHLLGHAIKQLWPDTKMAIGPVIDNGFYYDVDLEHTLTQEDLELLEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+  +D   +K+ +S ++AR+ F ++ E+YKV IL E+I   +   LY   E+ D+CR
Sbjct: 124 MHELAGKDYDVIKKKVSWQEARDTFAARGESYKVAILDENISHDDRPGLYHHEEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKL K +GAYWRGDS   ML RIYGTAW  +++L+ YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLQKTSGAYWRGDSKNKMLQRIYGTAWADKKQLSAYLQRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF+ L +++R K+K+  Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEAFVRMKLKEYQYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW++Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWENYKEAMFT------TSSENREYCVKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  FGFEKI
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQVRDEVNSCIKMVYDMYSTFGFEKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+GSD +WD AE  +   L      +++ I      GEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEKRIGSDDMWDRAEEDLAAAL------TENAIPFEYQPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF+LP R +A YV  ++E+  PVMIHRA+ GS+ERFIGI+ E F 
Sbjct: 471 HDCLDRAWQCGTVQLDFSLPGRLSASYVGENNERQVPVMIHRAILGSMERFIGILTEEFA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+QA+V  IT S  +Y  E+   L+   + ++ D RNE I +KIREH+++++
Sbjct: 531 GFFPTWLAPVQAVVMNITDSQSDYVSELTRKLQDAGIRVKADLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           P +++CGDKE     + +R   +   + +  +D   ++TK
Sbjct: 591 PYMLVCGDKEVEAGKVAVR---TRRGKDLGSMDVSEVITK 627


>gi|294649364|ref|ZP_06726795.1| threonine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
 gi|292824734|gb|EFF83506.1| threonine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
          Length = 640

 Score =  636 bits (1640), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 305/642 (47%), Positives = 430/642 (66%), Gaps = 16/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPE 65
           +T P+G  K F    +  ++A+SI   LAK  VA  IN ++ D  D + E  +++IIT +
Sbjct: 4   ITLPNGDQKQFDQPISVMELAQSIGPGLAKNTVAGRINDRLVDACDLITEDATVQIITQK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  AV+ ++PE ++ IGP+IE+GFYYD    +PF+ D++A IE++
Sbjct: 64  DEEGLEIIRHSCAHLVGHAVKQLFPEAKMVIGPVIEEGFYYDIWMPRPFTLDDMAAIEER 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+++I +D   +K+    E     F ++ E YK+ ++  +P +  + LY   ++ D+CRG
Sbjct: 124 MKKLIDQDYDVIKKMTPREDVIAEFTARGEEYKLRLIADMPEETQMGLYYHQDYLDMCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +T  +K F KL K++GAYWRGD+    L RIYGTAW  +++L  Y+  +EE+EKRD
Sbjct: 184 PHVPNTKFLKSF-KLTKISGAYWRGDAKNEQLQRIYGTAWADKKQLAAYIKRIEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHL 304
           HRK+ + +DLFH+ E+  G++FWH  GW I+Q L  YMR+  +D+ Y+EI TPQ++D  L
Sbjct: 243 HRKIGKALDLFHMQEEAPGMVFWHANGWTIYQVLEQYMRKVQQDNGYQEIKTPQIVDFTL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGH  +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYR+LP+RLAE
Sbjct: 303 WEKSGHAANYAENMFT------THSESRNYAVKPMNCPCHVQVFNQGLKSYRDLPIRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNEPSGSLHG+MRVRGFTQDDAH+FCTKEQ+  E      L + +YKDFGFE++ 
Sbjct: 357 FGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTKEQIGQEVADFIKLTLDVYKDFGFEEVQ 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +KLSTRPEKRVG DALWD AE  +   LD         +   +  GEGAFYGPK E+ LK
Sbjct: 417 MKLSTRPEKRVGDDALWDIAEKSLADALDDAG------LAWDLQPGEGAFYGPKIEFSLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D +GR WQCGTIQ DFNLP R +A YV   +E+  PVM+HRA+ GS ERFIGI+IE++ G
Sbjct: 471 DCLGRVWQCGTIQCDFNLPIRLDASYVTEDNERDQPVMLHRAILGSFERFIGILIEHYAG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
            +P WL+PIQA V  IT S  +  +++   LK + L   +D RNE I +KIRE ++++IP
Sbjct: 531 FMPPWLAPIQACVMNITDSQADACEQVVAKLKENGLRAISDLRNEKIGFKIRERTLERIP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
            +++ GD+E  E ++ +R         +S +DA   L K ++
Sbjct: 591 YLLVLGDREVEEGTVNVRTRSGKNLGTMS-IDAFIDLVKSAV 631


>gi|226944147|ref|YP_002799220.1| threonyl-tRNA synthetase [Azotobacter vinelandii DJ]
 gi|259516344|sp|C1DF42|SYT_AZOVD RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|226719074|gb|ACO78245.1| threonyl-tRNA synthetase [Azotobacter vinelandii DJ]
          Length = 640

 Score =  636 bits (1640), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 297/618 (48%), Positives = 426/618 (68%), Gaps = 15/618 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS + F    + ++VA+SI   LAK  VA  ++GK+ D  D +  + +++IITP+
Sbjct: 4   ITLPDGSQRTFDHPVSVAEVAQSIGAGLAKATVAGKVDGKLVDACDLIDHDATLQIITPK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   + +IRHSCAH++  AV+ ++P  ++ IGP+I++GFYYD   E+PF+ +++A IE++
Sbjct: 64  DEEGVEIIRHSCAHLVGHAVKQLYPTAKMVIGPVIDEGFYYDIAYERPFTPEDVAAIEQR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+E+I RD   +K+    E+  E+F+S+ E YK+ +++ +P ++ + LY   E+ D+CRG
Sbjct: 124 MRELIDRDYDVVKKMTPREQVIEVFKSRGEDYKLRLIDDMPDEKAMGLYYHEEYVDMCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +T +  K FKL K++GAYWRGD+    L R+YGTAW  +++L  Y+  +EE+EKRD
Sbjct: 184 PHVPNT-RFLKAFKLTKLSGAYWRGDAKNEQLQRVYGTAWADKKQLAAYIQRIEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHL 304
           HRKL + +DLFH  E+  G++FWH  GW ++Q L  YMR   +++ Y EI TPQV+D+ L
Sbjct: 243 HRKLGKRLDLFHTQEEAPGMVFWHPNGWTVYQVLEQYMRAVQRENGYLEIKTPQVVDRVL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHW +Y  NMF       T  + R +A+KPMNCP HV V+N GLKSYRELP+RLAE
Sbjct: 303 WEKSGHWANYAENMFT------TESESRDYAIKPMNCPCHVQVYNQGLKSYRELPLRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FG+ +RNEPSG+LHG+MRVRGFTQDDAH+FCT+EQM  E      L   +Y DFGF+ I 
Sbjct: 357 FGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEEQMQAESAAFIKLTRQVYADFGFQDIQ 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +KLSTRPE+RVGS  LWD AE  +   L++     +      +  GEGAFYGPK E+ LK
Sbjct: 417 LKLSTRPERRVGSGELWDRAEEALAAALESAGLPYE------LQPGEGAFYGPKIEFSLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D +GR WQCGT+Q+DFNLP R  A YV+ ++E+ HPVM+HRA+ GS ERFIGI+IE+++G
Sbjct: 471 DCLGRVWQCGTLQLDFNLPVRLGAEYVSENNERQHPVMLHRAILGSFERFIGILIEHYEG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P WL+P QA++  IT    E+A E+   L       + D RNE I +KIREH++ K+P
Sbjct: 531 AFPAWLAPTQAVIMNITDKQGEFALEVERTLNQGGFRAKCDLRNEKIGFKIREHTLLKVP 590

Query: 605 IIIICGDKEASERSIGIR 622
            +++ GD+E    S+ +R
Sbjct: 591 YLLVIGDREVETHSVAVR 608


>gi|283785057|ref|YP_003364922.1| threonyl-tRNA synthetase [Citrobacter rodentium ICC168]
 gi|282948511|emb|CBG88100.1| threonyl-tRNA synthetase [Citrobacter rodentium ICC168]
          Length = 642

 Score =  636 bits (1640), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 293/619 (47%), Positives = 424/619 (68%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D SD +  + ++ IIT +
Sbjct: 4   ITLPDGSQRHYDHAVSPMDVALDIGPGLAKATIAGRVNGELVDASDLIENDATLSIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ +WP  ++AIGP++++GFYYD D ++  + +++  +EK+
Sbjct: 64  DEEGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVVDNGFYYDVDLDRTLTQEDVDALEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+  ++   +K+ +S  +ARE F  + E YKV IL E+I   +   LY   E+ D+CR
Sbjct: 124 MHELAEKNYDVIKKKVSWHEARETFVKRGEPYKVSILDENIAHDDQPGLYHHEEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKLMK AGAYWRGDS+  ML RIYGTAW  ++ L  YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLMKTAGAYWRGDSDNKMLQRIYGTAWADKKALNAYLQRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF+ L  ++R K+K+  Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW++Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWENYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  FGFEKI
Sbjct: 357 EFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQIRDEVNACIRMVYDMYSTFGFEKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+GSD +WD AE  +   L+      ++ I     LGEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEKRIGSDEMWDRAEADLAVALE------ENNIPFEYQLGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF+LPSR +A YV   +E+  PVMIHRA+ GS+ERFIGI+ E F 
Sbjct: 471 YDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+Q +V  IT S  EY  E+   L++  + ++ D RNE I +KIREH+++++
Sbjct: 531 GFFPTWLAPVQVVVMNITDSQSEYVNELTQKLQNAGIRVKADLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++CGDKE     + +R
Sbjct: 591 PYMLVCGDKEVEAGKVAVR 609


>gi|269102906|ref|ZP_06155603.1| threonyl-tRNA synthetase [Photobacterium damselae subsp. damselae
           CIP 102761]
 gi|268162804|gb|EEZ41300.1| threonyl-tRNA synthetase [Photobacterium damselae subsp. damselae
           CIP 102761]
          Length = 643

 Score =  636 bits (1640), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 305/642 (47%), Positives = 425/642 (66%), Gaps = 17/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  DVA SI   LAK  +A  ++G   D  D +  + S+EIIT +
Sbjct: 4   ITLPDGSQRQFENPVSTMDVALSIGPGLAKATIAGRVDGVRVDACDLIENDASLEIITAK 63

Query: 66  DP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  A++ ++PE ++AIGP I++GFYYD D EQ  + ++L  IEK
Sbjct: 64  DEVDGLEIVRHSCAHLLGHAIKQLYPEAKMAIGPTIDNGFYYDIDLEQSLTQEDLEVIEK 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLC 183
           +M E+       +K+ +S ++AR+ FES+ E YK+EIL E++   +   LY   E+ D+C
Sbjct: 124 RMLELAKTKYQVVKKKVSWQEARDTFESRGETYKIEILDENVARDDRPGLYHHEEYIDMC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV   G  + F KL+ VAGAYWRG+S   ML RIYGTA++ ++ L  +L  LEE+ K
Sbjct: 184 RGPHVPHMGFCQNF-KLLSVAGAYWRGNSENKMLQRIYGTAFHDKKALKAHLTRLEEAAK 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRK+ +++DLFH+ ++  G++FWH  GW IF+ L  ++R K+   DY+E+  P ++D+
Sbjct: 243 RDHRKIGKQLDLFHMQQEAPGMVFWHHNGWTIFRELEVFVREKLNQYDYQEVKGPLMMDR 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+
Sbjct: 303 VLWERSGHWDKYADAMFT------TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRM 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSGSLHG+MRVRGFTQDDAH+FCT+ Q+  E      ++   YK FGFE 
Sbjct: 357 AEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTESQVQQEVTSCIEMVYDTYKTFGFEN 416

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+VKLSTRPEKRVGSDA+WD AE  +   L+++       I   +  GEGAFYGPK E+ 
Sbjct: 417 IVVKLSTRPEKRVGSDAMWDKAEADLVTALESMD------IPFEIQEGEGAFYGPKIEFT 470

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D + R WQCGT+Q+DF LP R  A YV   +E+  PVMIHRA+ GS+ERFIGI+IE++
Sbjct: 471 LHDCLDRAWQCGTVQLDFALPERLGATYVGEDNERHTPVMIHRAILGSLERFIGILIEDY 530

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P QA+V  IT S  EY QEI   LK   + +  D RNE I +KIREH++K+
Sbjct: 531 AGFFPTWLAPQQAVVMNITDSQSEYVQEIVEKLKKCGIRVNADLRNEKIGFKIREHTLKR 590

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P +++CGD+E     + +R        K  + D +  + +E
Sbjct: 591 VPYMLVCGDQEVEAGEVAVRTRKGKDLGKFKIDDLVAYMQQE 632


>gi|205352944|ref|YP_002226745.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|238690498|sp|B5RAX3|SYT_SALG2 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|205272725|emb|CAR37641.1| Threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|326628018|gb|EGE34361.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 9]
          Length = 642

 Score =  636 bits (1640), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 297/641 (46%), Positives = 429/641 (66%), Gaps = 16/641 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D SD +  + ++ IIT +
Sbjct: 4   ITLPDGSQRHYDHPVSPMDVALDIGPGLAKATIAGRVNGELVDASDLIENDATLAIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ +WP  ++AIGP++++GFYYD D ++  + +++  +EK+
Sbjct: 64  DEEGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVVDNGFYYDVDLDRTLTQEDVEALEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+  ++   +K+ +S   ARE F  + E YKV IL E+I   +   LY   E+ D+CR
Sbjct: 124 MHELAEKNYDVIKKKVSWHDARETFVKRGETYKVAILDENIAHDDKPGLYHHEEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKLMK AGAYWRGDSN  ML RIYGTAW  ++ L  YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLMKTAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF+ L  ++R K+K+  Y+E+  P ++ + 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMGRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHWD+Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWDNYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  FGFEKI
Sbjct: 357 EFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQIRDEVNACIRMVYDMYSTFGFEKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRP+KR+GSD +WD AE  +   L+      ++ I     LGEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPDKRIGSDEMWDRAEADLAVALE------ENNIPFEYQLGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF+LPSR +A YV   +E+  PVMIHRA+ GS+ERFIGI+ E F 
Sbjct: 471 YDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+Q +V  IT S  EY  E+   L++  + ++ D RNE I +KIREH+++++
Sbjct: 531 GFFPTWLAPVQVVVMNITDSQSEYVNELTQKLQNAGIRVKADLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P +++CGDKE     + +R         + + D I  L +E
Sbjct: 591 PYMLVCGDKEVEAGKVAVRTRRGKDLGSLDVNDVIEKLQQE 631


>gi|218548710|ref|YP_002382501.1| threonyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
 gi|226701412|sp|B7LQ71|SYT_ESCF3 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|218356251|emb|CAQ88868.1| threonyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
 gi|324113470|gb|EGC07445.1| threonyl-tRNA synthetase [Escherichia fergusonii B253]
          Length = 642

 Score =  636 bits (1640), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 295/619 (47%), Positives = 422/619 (68%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D  D +  +  + IIT +
Sbjct: 4   ITLPDGSQRHYDHAVSPMDVALDIGPGLAKACIAGRVNGELVDACDLIENDAQLAIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ +WP  ++AIGP+I++GFYYD D ++  + +++  +EK+
Sbjct: 64  DEEGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVIDNGFYYDVDLDRTLTQEDVEALEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+  ++   +K+ +S  +ARE F  + E+YKV IL E+I   +   LY   E+ D+CR
Sbjct: 124 MHELAEKNYDVIKKKVSWHEARETFVKRGESYKVSILDENIAHDDQPGLYFHEEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKLMK AGAYWRGDSN  ML RIYGTAW  ++ L  YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLMKTAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF+ L  ++R K+K+  Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRTKLKEYQYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW++Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWENYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+ +E      L+  +Y  FGFEKI
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+GSD +WD AE  +   L+      ++ I     LGEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEKRIGSDEMWDRAEADLAVALE------ENNIPFEYQLGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF+LPSR +A YV   +E+  PVMIHRA+ GS+ERFIGI+ E F 
Sbjct: 471 YDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+Q ++  IT S  EY  E+   L +  + ++ D RNE I +KIREH+++++
Sbjct: 531 GFFPTWLAPVQVVIMNITDSQSEYVNELTQKLSNAGIRVKADLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++CGDKE     + +R
Sbjct: 591 PYMLVCGDKEVESGKVAVR 609


>gi|104781106|ref|YP_607604.1| threonyl-tRNA synthetase [Pseudomonas entomophila L48]
 gi|123079219|sp|Q1IC15|SYT_PSEE4 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|95110093|emb|CAK14798.1| threonyl-tRNA synthetase [Pseudomonas entomophila L48]
          Length = 640

 Score =  636 bits (1640), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 288/636 (45%), Positives = 431/636 (67%), Gaps = 21/636 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS + F    + ++VA SI   LAK  +A  ++GK+ D  D +  + +++IITP+
Sbjct: 4   ITLPDGSQRTFDQPVSVAEVAASIGAGLAKATLAGKVDGKLVDACDKIDHDATLQIITPK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  AV+ ++P  ++ IGP+I++GFYYD   E+PF+ D+LA IEK+
Sbjct: 64  DEEGLEIIRHSCAHLIGHAVKQLYPTAKMVIGPVIDEGFYYDIAYERPFTPDDLAAIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           MQ++I  D   +K+     +  ++F S+ E YK+ ++E +P ++ + LY   E+ D+CRG
Sbjct: 124 MQQLIDTDYDVVKKMTPRAEVIDVFTSRGEDYKLRLVEDMPDEQAMGLYYHEEYVDMCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +T +  K FKL K++GAYWRGD+    L R+YGTAW  +++L  Y+  +EE+EKRD
Sbjct: 184 PHVPNT-RFLKAFKLTKLSGAYWRGDAKNEQLQRVYGTAWADKKQLAAYIQRIEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHL 304
           HRK+ +++DLFH+ E+  G++FWH  GW ++Q L  YMR+  +++ Y+EI TPQV+D+ L
Sbjct: 243 HRKIGKQLDLFHLQEEAPGMVFWHANGWTVYQVLEQYMRQVQRENGYQEIKTPQVVDRIL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHW +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYR+LP+RLAE
Sbjct: 303 WERSGHWSNYAENMFT------TSSENRDYAVKPMNCPCHVQVFNQGLKSYRDLPLRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FG+ +RNEPSG+LHG+MRVRGF QDDAH+FCT++Q+  E      L + +YKDFGF  + 
Sbjct: 357 FGACHRNEPSGALHGIMRVRGFVQDDAHIFCTEDQVKKEAADFIKLTLDVYKDFGFTDVA 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +KLSTRP KRVGS+ LWD AE  +   L+      +  +      GEGAFYGPK E+ L+
Sbjct: 417 MKLSTRPAKRVGSEELWDRAEGALADALN------ESGLEWEYQPGEGAFYGPKIEFTLR 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D +GR+WQCGT+Q D NLP R +A Y+   + +  PVM+HRA+ GS ERFIG++IE++ G
Sbjct: 471 DCLGRNWQCGTLQYDPNLPERLDASYIAEDNSRVRPVMLHRAILGSFERFIGMLIEHYAG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P WL+P QA++  IT    ++A E+   L       ++D RNE I +KIREH++ ++P
Sbjct: 531 VFPAWLAPTQAVIMNITDKQADFALEVEKALNGSGFRAKSDLRNEKIGFKIREHTLLRVP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
            +++ GD+E   +++ +R      T++ + L ++P+
Sbjct: 591 YLLVIGDREVETQTVAVR------TREGADLGSMPV 620


>gi|330445795|ref|ZP_08309447.1| threonyl-tRNA synthetase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328489986|dbj|GAA03944.1| threonyl-tRNA synthetase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 643

 Score =  635 bits (1639), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 302/642 (47%), Positives = 428/642 (66%), Gaps = 17/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  DVA SI   LAK  +A  ++G   D  D +  + S+EIIT +
Sbjct: 4   ITLPDGSQRQFDAPVSTMDVALSIGPGLAKATIAGRVDGVRVDACDLIENDASLEIITAK 63

Query: 66  DPR-SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  A++ ++PE ++AIGP I++GFYYD D EQ  + ++L  IEK
Sbjct: 64  DEEDGLEIVRHSCAHLLGHAIKQLYPEAKMAIGPTIDNGFYYDIDLEQSLTQEDLEVIEK 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLC 183
           +M E+       +K+ +S ++AR+ FE++ E YK+EIL E++   +   LY   E+ D+C
Sbjct: 124 RMLELAKTKYQVVKKKVSWQEARDAFEARGETYKIEILDENVARDDRPGLYHHEEYIDMC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV   G  + F KL+ VAGAYWRG+S+  ML RIYGTA++ ++ L  +L  LEE+ K
Sbjct: 184 RGPHVPHMGFCQNF-KLLSVAGAYWRGNSDNKMLQRIYGTAFHDKKALKAHLTRLEEAAK 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRK+ +++DLFH+ ++  G++FWH  GW IF+ L  ++R K+ + DY+E+  P ++D+
Sbjct: 243 RDHRKIGKQLDLFHMQQEAPGMVFWHHNGWTIFRELEVFVREKLNEYDYQEVKGPLMMDR 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+
Sbjct: 303 VLWERSGHWDKYADAMFT------TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRM 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSGSLHG+MRVRGFTQDDAH+FCT+ Q+  E      ++   YK FGF+ 
Sbjct: 357 AEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTEAQVQQEVTSCIEMVYDTYKTFGFDN 416

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+VKLSTRPEKRVGSDA+WD AE+ +   L+++       I   +  GEGAFYGPK E+ 
Sbjct: 417 IVVKLSTRPEKRVGSDAMWDKAESDLVTALESMN------IPFEIQEGEGAFYGPKIEFT 470

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D + R WQCGT+Q+DF LP R  A YV   +E+  PVMIHRA+ GS+ERFIGI+IE++
Sbjct: 471 LHDCLDRAWQCGTVQLDFALPERLGATYVGEDNERHTPVMIHRAILGSLERFIGILIEDY 530

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P QA+V  IT +  EY QEI   LK   + +  D RNE I +KIREH++K+
Sbjct: 531 AGFFPTWLAPQQAVVMNITDAQSEYVQEIVEKLKKCGIRVNADLRNEKIGFKIREHTLKR 590

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P +++CGDKE     + +R        K  + + +  + +E
Sbjct: 591 VPFMLVCGDKEVEAGVVAVRTRKGKDLGKFKIDELVAFMQEE 632


>gi|254362299|ref|ZP_04978411.1| threonine--tRNA ligase [Mannheimia haemolytica PHL213]
 gi|153093879|gb|EDN74807.1| threonine--tRNA ligase [Mannheimia haemolytica PHL213]
          Length = 643

 Score =  635 bits (1639), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 295/641 (46%), Positives = 434/641 (67%), Gaps = 16/641 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS ++F    +  +VA+SI   LAK  +A  +NG+  D SD + ++ ++EIIT +
Sbjct: 4   ITLPDGSQRSFDNPVSVMEVAQSIGAGLAKATIAGRVNGERRDASDIISQDSTLEIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHS AH++  +++ ++P+V++AIGP IE+GFYYD D ++  + ++L  +EK+
Sbjct: 64  DEDGLEIIRHSTAHLLGHSIKQLFPDVKMAIGPTIENGFYYDIDLDRSLTQEDLDALEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K+ +S ++AR+ FE + E YK+ IL E+I       LY   E+ D+CR
Sbjct: 124 MLELAKTNYDVVKRPVSWQEARDTFEKRGEPYKMAILDENIERTATPALYHHEEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKL KVAGAYWRGDS   ML RIYGTAW  +++L +YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLQKVAGAYWRGDSKNKMLQRIYGTAWADKKQLAEYLQRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHR++ + +DL+H+ E+  G++FWH  GW IF+ L +++R K+K+ DY+E+  P ++D+ 
Sbjct: 243 DHRRIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW +Y   MF  +  +      R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWQNYADLMFTTQSEN------REYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+ +E +    ++  IY  FGF  I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIESEVISCIKMVYDIYSTFGFTNI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPE R+G DA+WD AE   KG+ + ++N+    +   +  GEGAFYGPK E+ L
Sbjct: 417 AVKLSTRPENRIGDDAMWDRAE---KGLANALRNNG---LEYEIQEGEGAFYGPKIEFAL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D +GR+WQCGT+Q+DF LP R  A YV   + +  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 RDCLGREWQCGTVQLDFALPGRLAASYVAEDNGRRTPVMIHRAILGSIERFIGIITEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P QA+V  IT S  +Y Q++   L    + ++ D RNE + +K+REH+++++
Sbjct: 531 GFFPTWLAPTQAVVMNITDSQADYVQQVVKQLSDAGIRVKADLRNEKVGFKVREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P +++CGDKE +E  + +R           + D + IL  +
Sbjct: 591 PYMLVCGDKEIAEGKVSVRTRKGADLGTYLVSDLVEILKNQ 631


>gi|146282712|ref|YP_001172865.1| threonyl-tRNA synthetase [Pseudomonas stutzeri A1501]
 gi|166225484|sp|A4VM22|SYT_PSEU5 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|145570917|gb|ABP80023.1| threonyl-tRNA synthetase [Pseudomonas stutzeri A1501]
          Length = 640

 Score =  635 bits (1639), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 291/624 (46%), Positives = 424/624 (67%), Gaps = 18/624 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP+   +T PDGS ++F    T ++VA+SI   LAK  +A  ++GK+ D  D + R+ S+
Sbjct: 1   MPT---ITLPDGSQRSFDHPVTVAEVAQSIGAGLAKATLAGKVDGKLVDACDLIERDASL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           +IITP+D   L +IRHSCAH++  AV+ ++P  ++ IGP+I++GFYYD   ++PF+ +++
Sbjct: 58  QIITPKDEEGLEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIDEGFYYDIAIDRPFTPEDM 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A IEK+M E+I +D   +K+     +  E+F S+ E YK+ +++ +P ++ + LY   E+
Sbjct: 118 AAIEKRMAELIDKDYDVIKKVTPRAEVIEVFTSRGEDYKLRLVDDMPDEQAMGLYYHEEY 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            D+CRGPHV +T +  K FKL +++GAYWRGDS    L RIYGTAW  +++L  Y+  +E
Sbjct: 178 VDMCRGPHVPNT-RFLKAFKLTRISGAYWRGDSKNEQLQRIYGTAWADKKQLAAYIQRIE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQ 298
           E+EKRDHR++ +++DLFH  E+  G++FWH  GW ++Q L  YMR+  +++ Y+E+ TPQ
Sbjct: 237 EAEKRDHRRIGKQLDLFHTQEEAPGMVFWHPAGWTLYQNLEQYMRQVQRENGYQEVRTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHW +Y  NMF       T  + R +A+KPMNCP HV +FN GLKSYR+L
Sbjct: 297 VVDRILWEKSGHWSNYAENMFT------TSSENRDYAVKPMNCPCHVQIFNQGLKSYRDL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG+ +RNEPSG+LHG+MRVRGFTQDDAH+FCT+EQ+  E      L + +Y DF
Sbjct: 351 PLRMAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEEQVKKEAADFIKLTLKVYADF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF  I +KLSTRP KRVGSD LWD AE  +   L+      +  +      GEGAFYGPK
Sbjct: 411 GFSDIAMKLSTRPAKRVGSDELWDRAEGALAEALN------ESGLAWEYQPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ L+D +GR+WQCGT+Q D NLP R +A YV   + +  PVM+HRA+ GS ERFIG++
Sbjct: 465 IEFTLRDCLGRNWQCGTLQYDPNLPERLDASYVAEDNSRQRPVMLHRAILGSFERFIGML 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE++ G  P WL+P QA++  IT     +A E+   L       + D RNE I +KIREH
Sbjct: 525 IEHYAGAFPAWLAPTQAVIMNITDKQAAFAIEVEKTLVQSGFRAKCDLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIR 622
           ++ K P +++ GD+E   RS+ +R
Sbjct: 585 TLLKTPYLLVIGDREVETRSVAVR 608


>gi|307131177|ref|YP_003883193.1| threonyl-tRNA synthetase [Dickeya dadantii 3937]
 gi|306528706|gb|ADM98636.1| threonyl-tRNA synthetase [Dickeya dadantii 3937]
          Length = 642

 Score =  635 bits (1639), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 292/640 (45%), Positives = 437/640 (68%), Gaps = 19/640 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D +D +  +  + IIT +
Sbjct: 4   ITLPDGSQRHYDHAVSPLDVALDIGPGLAKACIAGRVNGELVDATDLIESDAQLSIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   + ++RHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D ++  + ++L  +EK+
Sbjct: 64  DEDGVEILRHSCAHLLGHAIKQLWPDTKMAIGPVIDNGFYYDVDLDRTLTQEDLDLLEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+ ++D   +K+ +S ++AR+ F ++ E+YKV IL E+I   +   LY   E+ D+CR
Sbjct: 124 MHELASKDYDVIKKKVSWQEARDTFAARGESYKVAILDENISHDDRPGLYHHEEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKL K +GAYWRGDS   ML RIYGTAW  +++L+ YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLQKTSGAYWRGDSKNKMLQRIYGTAWADKKQLSAYLQRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF+ L +++R K+K+  Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEAFVRMKLKEYQYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW++Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWENYKEAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  FGFEKI
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQVRDEVNSCIKMVYDMYSTFGFEKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+GSD +WD AE  +   L      +++ I      GEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEKRIGSDDMWDRAEEDLAAAL------TENGIPFDYQPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF+LP R +A YV  ++E+  PVMIHRA+ GS+ERFIGI+ E F 
Sbjct: 471 HDCLDRAWQCGTVQLDFSLPGRLSASYVGENNERQVPVMIHRAILGSMERFIGILTEEFA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+QA+V  IT +  +Y  E+   L+   + ++ D RNE I +KIREH+++++
Sbjct: 531 GFFPTWLAPVQAVVMNITDTQSDYVSELTRKLQDAGIRVKADLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           P +++CGDKE     + +R   +   + +  LD   ++TK
Sbjct: 591 PYMLVCGDKEVEAGKVAVR---TRRGKDLGSLDVSEVITK 627


>gi|146311380|ref|YP_001176454.1| threonyl-tRNA synthetase [Enterobacter sp. 638]
 gi|166987323|sp|A4W9M3|SYT_ENT38 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|145318256|gb|ABP60403.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Enterobacter
           sp. 638]
          Length = 642

 Score =  635 bits (1639), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 294/619 (47%), Positives = 420/619 (67%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  DVA  I   LAK  +A  +NG++ D SD +  +  + IIT +
Sbjct: 4   ITLPDGSQRQFDRAVSPMDVALDIGPGLAKATIAGRVNGELVDASDLIENDAQLSIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   + +IRHSCAH++  A++ +WP  ++AIGP+I++GFYYD D +   + +++  +EK+
Sbjct: 64  DAEGIEIIRHSCAHLLGHAIKQLWPNTKMAIGPVIDNGFYYDVDLDHTLTQEDIDALEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K+ +S  +ARE F  + E YKV IL E+I   +   LY   E+ D+CR
Sbjct: 124 MHELAETNYDVIKKNVSWHEARETFVKRGENYKVSILDENISHDDKPGLYHHEEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKLMK+AGAYWRGDSN  ML RIYGTAW  ++ L  YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLMKIAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLVRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF+ L +++R K+K+  Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELETFVRSKLKEYQYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHWD+Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWDNYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT+ Q+ +E      ++  +Y  FGFEKI
Sbjct: 357 EFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEGQVRDEVNACIRMVYDMYSTFGFEKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+GSD  WD AE  +   L+      ++ I     LGEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEKRIGSDETWDRAEADLAVALE------ENNIPFEYQLGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF+LP R +A YV   +E+  PVMIHRA+ GSIERFIGI+ E F 
Sbjct: 471 YDCLDRAWQCGTVQLDFSLPQRLSASYVGEDNERQIPVMIHRAILGSIERFIGILTEEFA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+Q +V  IT S  +Y +E+   L++  + ++ D RNE I +KIREH+++++
Sbjct: 531 GFFPTWLAPVQVVVMNITDSQADYVKELTQKLQNAGIRVKADLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++CGDKE     + +R
Sbjct: 591 PYMLVCGDKEVESGKVAVR 609


>gi|325919878|ref|ZP_08181868.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Xanthomonas
           gardneri ATCC 19865]
 gi|325549662|gb|EGD20526.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Xanthomonas
           gardneri ATCC 19865]
          Length = 634

 Score =  635 bits (1638), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 290/621 (46%), Positives = 416/621 (66%), Gaps = 16/621 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I +T PDGS + F    +   VA+SI   LAK  +A  ++G++ D SD +  + S+ IIT
Sbjct: 2   INITLPDGSRREFESPVSVMQVAQSIGAGLAKATIAGQVDGQLVDASDVIDHDASLRIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   + +IRHSCAH++  AV+ ++PEV++ IGP+I +GFYYD   E+PF+ D++A IE
Sbjct: 62  AKDAEGVEIIRHSCAHLVGHAVKQLYPEVKMVIGPVIAEGFYYDIYSERPFTPDDMAAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-ENVTLYRQGEWFDL 182
           ++MQE+IA+D   +K+     +  ELF  + E YK+ ++E + A    + LY   E+ D+
Sbjct: 122 QRMQELIAQDYEVIKKVTPRAEVIELFAQRGEEYKLRLIEDMSADITAMGLYYHQEYVDM 181

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +T +  K FKL +++GAYWRGD+    L RIYGTAW  +++L  Y+  +EE++
Sbjct: 182 CRGPHVPNT-RFLKAFKLTRISGAYWRGDAKNEQLQRIYGTAWADKKQLDAYILRMEEAD 240

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLD 301
           KRDHR++ ++ DLFH+ E+  G++FWH KGW ++Q +  YMR+  +D  Y E+  PQ+LD
Sbjct: 241 KRDHRRIGKQQDLFHLQEEAPGLVFWHPKGWSLWQVVEQYMRKVYRDSGYGEVRCPQILD 300

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             LWQ+SGHWD+Y+  MF       T  + RT+A+KPMNCPGHV VFN GL SYR+LP+R
Sbjct: 301 VSLWQKSGHWDNYQDAMFF------TESEKRTYAVKPMNCPGHVQVFNQGLHSYRDLPIR 354

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
             EFG+ +RNEPSG+LHG++RVRGFTQDD HVFC + Q+  E    H   +++Y  FGF+
Sbjct: 355 YGEFGACHRNEPSGALHGILRVRGFTQDDGHVFCLESQIEAEVTAFHQQALAVYTAFGFD 414

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            I +K++ RPEKR+G D  WD AE  ++  L       Q+      L GEGAFYGPK EY
Sbjct: 415 DIEIKIALRPEKRLGDDVTWDKAEAALRSALGVCGVEWQE------LPGEGAFYGPKIEY 468

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            LKDAIGR WQ GT+QVDF +P R  A YV+ HS+K HPVM+HRA+ GS+ERFIGI+IE+
Sbjct: 469 HLKDAIGRTWQLGTMQVDFMMPGRLGAEYVDEHSQKKHPVMLHRAIVGSMERFIGILIEH 528

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G  P WL+P+Q +V  IT +  +Y   +   L +    +  D RNE I YKIREH+++
Sbjct: 529 HAGAFPSWLAPVQVVVANITDAQADYVDSVRKTLANQGFRVNADLRNEKIGYKIREHTLQ 588

Query: 602 KIPIIIICGDKEASERSIGIR 622
           ++P +++ GD+E    ++ +R
Sbjct: 589 RVPYLLVVGDREKENGAVAVR 609


>gi|325497120|gb|EGC94979.1| threonyl-tRNA synthetase [Escherichia fergusonii ECD227]
          Length = 652

 Score =  635 bits (1638), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 295/619 (47%), Positives = 422/619 (68%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D  D +  +  + IIT +
Sbjct: 14  ITLPDGSQRHYDHAVSPMDVALDIGPGLAKACIAGRVNGELVDACDLIENDAQLAIITAK 73

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ +WP  ++AIGP+I++GFYYD D ++  + +++  +EK+
Sbjct: 74  DEEGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVIDNGFYYDVDLDRTLTQEDVEALEKR 133

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+  ++   +K+ +S  +ARE F  + E+YKV IL E+I   +   LY   E+ D+CR
Sbjct: 134 MHELAEKNYDVIKKKVSWHEARETFVKRGESYKVSILDENIAHDDQPGLYFHEEYVDMCR 193

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKLMK AGAYWRGDSN  ML RIYGTAW  ++ L  YL  LEE+ KR
Sbjct: 194 GPHVPNM-RFCHHFKLMKTAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRLEEAAKR 252

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF+ L  ++R K+K+  Y+E+  P ++D+ 
Sbjct: 253 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRTKLKEYQYQEVKGPFMMDRV 312

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW++Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 313 LWEKTGHWENYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 366

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+ +E      L+  +Y  FGFEKI
Sbjct: 367 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEKI 426

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+GSD +WD AE  +   L+      ++ I     LGEGAFYGPK E+ L
Sbjct: 427 VVKLSTRPEKRIGSDEMWDRAEADLAVALE------ENNIPFEYQLGEGAFYGPKIEFTL 480

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF+LPSR +A YV   +E+  PVMIHRA+ GS+ERFIGI+ E F 
Sbjct: 481 YDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFA 540

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+Q ++  IT S  EY  E+   L +  + ++ D RNE I +KIREH+++++
Sbjct: 541 GFFPTWLAPVQVVIMNITDSQSEYVNELTQKLSNAGIRVKADLRNEKIGFKIREHTLRRV 600

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++CGDKE     + +R
Sbjct: 601 PYMLVCGDKEVESGKVAVR 619


>gi|258544548|ref|ZP_05704782.1| threonine--tRNA ligase [Cardiobacterium hominis ATCC 15826]
 gi|258520179|gb|EEV89038.1| threonine--tRNA ligase [Cardiobacterium hominis ATCC 15826]
          Length = 639

 Score =  635 bits (1638), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 292/642 (45%), Positives = 432/642 (67%), Gaps = 16/642 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           + +T PDGS++ +    +G D+A SI   LAK A+AV ++G   DLSDP+  + S+ IIT
Sbjct: 2   LNITLPDGSVRQYENPTSGRDIAASIGSGLAKAALAVRVDGVERDLSDPITADASVAIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            ++   + +IRHS AH++  A++ +WPE ++ IGP+IE+GFYYD D E  F+ ++L ++E
Sbjct: 62  AKEDAGVDIIRHSTAHLLGHALKQLWPEAKMVIGPVIENGFYYDIDSEHRFTPEDLEKLE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIP-AKENVTLYRQGEWFDL 182
            +M+++ A      K +     AR+ F  + E +K+ +++    + + V LY   E+ D+
Sbjct: 122 ARMKDLAATGYAVEKVWTPVADARKAFSDRHEDFKLRLIDDFDDSVKEVGLYHHQEYLDM 181

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV   G VK F KL K++G+YWRGD++   L RIYG A+  Q+ L  YL    E+E
Sbjct: 182 CRGPHVPHMGHVKAF-KLTKLSGSYWRGDASGEPLQRIYGVAFADQKTLDAYLQQQAEAE 240

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLD 301
           KRDHR++ +++D FH+ E+  G++FWH KGW I++ + +YMR K+ K  YEE+  PQ+LD
Sbjct: 241 KRDHRRIGKQLDFFHLQEEAPGMVFWHAKGWVIYREIENYMRGKLRKYGYEEVQGPQILD 300

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW++SGHWD +  NMF   C D+       +A+KPMNCPGH+ +FN GL+SYRELPVR
Sbjct: 301 RSLWEKSGHWDKFGGNMFTC-CIDE-----HDYAIKPMNCPGHIQIFNQGLRSYRELPVR 354

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
            AEFG  +RNEPSG+LHGLMRVR F QDD H+FCT+ Q+  E  ++  ++  +Y DFGF+
Sbjct: 355 YAEFGICHRNEPSGTLHGLMRVRRFVQDDGHIFCTRSQIREEIERVCQMVYEVYHDFGFD 414

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
           ++ + LSTRPEKRVGSD +WD+AE  ++  L+        R+  G    EGAFYGPK E+
Sbjct: 415 EVELALSTRPEKRVGSDEIWDEAEADLQAALEA--QGKPFRLQPG----EGAFYGPKIEF 468

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            LKD++GR WQCGT+Q+DF++P R  A Y++ +  +  PVMIHRA+ GS+ERFIGI+IE 
Sbjct: 469 TLKDSLGRRWQCGTVQLDFSMPERLGAHYIDENDVRQTPVMIHRAILGSLERFIGILIEQ 528

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G +PLWLSP+QA+V  IT +  +YA  +A  L +  L +E D RNE INYKIREH+++
Sbjct: 529 YAGQMPLWLSPVQAVVMPITDAQADYATAVAEKLATAGLRVEKDLRNEKINYKIREHTLQ 588

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           ++P +++ GD+E +  S+ +R+        +S+ D I  L +
Sbjct: 589 RVPFMLVAGDREKAASSVSVRQRDGKDLGVMSVDDLITHLQQ 630


>gi|227111545|ref|ZP_03825201.1| threonyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 642

 Score =  635 bits (1638), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 293/641 (45%), Positives = 429/641 (66%), Gaps = 16/641 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D SD +  +  + IIT +
Sbjct: 4   ITLPDGSQRHYDHAVSPLDVALDIGPGLAKACIAGRVNGELVDASDKIDTDAQLAIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  AV+ +WP+ ++AIGP+I++GFYYD D ++  + +++  +EK+
Sbjct: 64  DEAGLEIIRHSCAHLLGHAVKQLWPDTKMAIGPVIDNGFYYDVDIDRTLTQEDIELLEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   D   +K+ +S ++AR+ F ++ E YK+ IL E+I   +   LY   E+ D+CR
Sbjct: 124 MHELADTDYDVIKKKVSWQEARDAFAARGETYKMAILDENISRDDRPGLYHHEEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKL K +GAYWRGDS   ML RIYGTAW  +++L  YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLQKTSGAYWRGDSKNKMLQRIYGTAWADKKQLASYLQRLEEASKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF+ L +++R K+K   Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEAFVRMKLKSYQYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           +W+++GHW++Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 MWEKTGHWENYKEAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  FGFEKI
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQVRDEVNSCIKMVYDMYSTFGFEKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+GSD +WD AE  +   L      +++ I      GEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEKRIGSDEMWDRAEADLAAAL------TENNIEFAYQPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF+LP R NA YV   +E+  PVMIHRA+ GS+ERFIGI+ E F 
Sbjct: 471 HDCLDRAWQCGTVQLDFSLPGRLNASYVGESNERQVPVMIHRAILGSMERFIGILTEEFA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+QA++  IT S  +Y  E+   L+   + ++ D RNE I +KIREH+++++
Sbjct: 531 GFFPTWLAPVQAVIINITDSQSDYVNELTRKLQEAGIRVKADLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P +++CGDKE     + +R         + + + I  L +E
Sbjct: 591 PYMLVCGDKEVEAGKVAVRTRRGKDLGSMDVSEVISKLQQE 631


>gi|227327045|ref|ZP_03831069.1| threonyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 642

 Score =  635 bits (1638), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 292/641 (45%), Positives = 429/641 (66%), Gaps = 16/641 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D SD +  +  + IIT +
Sbjct: 4   ITLPDGSQRHYDHAVSPLDVALDIGPGLAKACIAGRVNGELVDASDKIDTDAQLAIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D ++  + +++  +EK+
Sbjct: 64  DEAGLEIIRHSCAHLLGHAIKQLWPDTKMAIGPVIDNGFYYDVDIDRTLTQEDIELLEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   D   +K+ +S ++AR+ F ++ E YK+ IL E+I   +   LY   E+ D+CR
Sbjct: 124 MHELADTDYDVIKKKVSWQEARDAFAARGETYKIAILDENISRDDRPGLYHHEEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKL K +GAYWRGDS   ML RIYGTAW  +++L  YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLQKTSGAYWRGDSKNKMLQRIYGTAWADKKQLAAYLQRLEEASKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF+ L +++R K+K   Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEAFVRMKLKSYQYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           +W+++GHW++Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 MWEKTGHWENYKEAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  FGFEKI
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQVRDEVNSCIKMVYDMYSTFGFEKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+GSD +WD AE  +   L      +++ I      GEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEKRIGSDEMWDRAEADLAAAL------TENNIEFAYQPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF+LP R NA YV   +E+  PVMIHRA+ GS+ERFIGI+ E F 
Sbjct: 471 HDCLDRAWQCGTVQLDFSLPGRLNASYVGESNERQVPVMIHRAILGSMERFIGILTEEFA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+QA++  IT S  +Y  E+   L+   + ++ D RNE I +KIREH+++++
Sbjct: 531 GFFPTWLAPVQAVIINITDSQSDYVNELTRKLQEAGIRVKADLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P +++CGDKE     + +R         + + + I  L +E
Sbjct: 591 PYMLVCGDKEVETGKVAVRTRRGKDLGSMDVSEVISKLQQE 631


>gi|148548433|ref|YP_001268535.1| threonyl-tRNA synthetase [Pseudomonas putida F1]
 gi|166225483|sp|A5W5E1|SYT_PSEP1 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|148512491|gb|ABQ79351.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Pseudomonas
           putida F1]
          Length = 640

 Score =  635 bits (1637), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 288/639 (45%), Positives = 429/639 (67%), Gaps = 15/639 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS ++F    + ++VA SI   LAK  VA  ++GK+ D  D +  + +++IITP+
Sbjct: 4   ITLPDGSQRSFDHAVSIAEVAASIGAGLAKATVAGKVDGKLVDACDLISNDATLQIITPK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  AV+ ++P  ++ IGP+I++GFYYD   E+PF+ +++A IEK+
Sbjct: 64  DEEGLEIIRHSCAHLVGHAVKQLYPTAKMVIGPVIDEGFYYDIAYERPFTPEDMAAIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M E+I +D   +K+     +  ++F ++ E YK+ ++E +P ++ + LY   E+ D+CRG
Sbjct: 124 MMELIEKDYDVVKKMTPRAEVIDVFTARGEDYKLRLVEDMPDEQAMGLYYHEEYVDMCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +T +  K FKL K++GAYWRGD+    L R+YGTAW  +++L  Y+  +EE+EKRD
Sbjct: 184 PHVPNT-RFLKAFKLTKLSGAYWRGDAKNEQLQRVYGTAWADKKQLAAYIQRIEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHL 304
           HRK+ +++DLFH+ E+  G++FWH  GW ++Q L  YMR   +++ Y+EI TPQV+D+ L
Sbjct: 243 HRKIGKQLDLFHLQEEAPGMVFWHANGWTVYQVLEQYMRGVQRENGYQEIKTPQVVDRIL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHW +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYR+LP+RLAE
Sbjct: 303 WERSGHWSNYAENMFT------TSSESRDYAVKPMNCPCHVQVFNQGLKSYRDLPLRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FG+ +RNEPSG+LHG+MRVRGF QDDAH+FCT+EQ+  E      L + +YKDFGF  I 
Sbjct: 357 FGACHRNEPSGALHGIMRVRGFVQDDAHIFCTEEQVKKEAADFIKLTLDVYKDFGFSDIA 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +KLSTRP KRVGS+ LWD AE  +   L+      +  +      GEGAFYGPK E+ L+
Sbjct: 417 MKLSTRPAKRVGSEELWDRAETALADALN------ESGLEWEYQPGEGAFYGPKIEFTLR 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D +GR+WQCGT+Q D NLP R +A Y+   + +  PVM+HRA+ GS ERFIG++IE++ G
Sbjct: 471 DCLGRNWQCGTLQYDPNLPERLDASYIAEDNSRVRPVMLHRAILGSFERFIGMLIEHYAG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P WL+P QA++  IT    ++A E+   L       ++D RNE I +KIREH++ K+P
Sbjct: 531 VFPAWLAPTQAVIMNITDKQTDFALEVEKSLNGSGFRAKSDLRNEKIGFKIREHTLLKVP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +++ GD+E   +++ +R         + +   + +LT+
Sbjct: 591 YLLVIGDREVETQTVAVRTREGADLGSMPVAQFVELLTQ 629


>gi|254282289|ref|ZP_04957257.1| threonyl-tRNA synthetase [gamma proteobacterium NOR51-B]
 gi|219678492|gb|EED34841.1| threonyl-tRNA synthetase [gamma proteobacterium NOR51-B]
          Length = 643

 Score =  634 bits (1636), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 306/618 (49%), Positives = 415/618 (67%), Gaps = 15/618 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPE 65
           +T PDGS + F    +  +VA  I   LAK A+A  ++G+  D S  + +  ++ I+T  
Sbjct: 4   ITLPDGSERRFDRPVSVHEVAADIGPGLAKAALAGVVDGEPRDTSHVIADDAALSIVTER 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   + ++RHS AH++A+A Q ++P+ QV IGP +EDGFYYDF  E  F+ ++L +IE +
Sbjct: 64  DEAGVEILRHSTAHLLAQATQQLFPDTQVTIGPTVEDGFYYDFATEHRFTPEDLEKIEAR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M EI+A+D P  +   S E+A +LF    E +KV+I+E +P  E ++LYRQGEW DLCRG
Sbjct: 124 MAEIVAQDLPVERVVCSREEAAKLFAEMGEHFKVQIVEDLPEGEEISLYRQGEWVDLCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV STG++K F KL KVAGAYWRGD++   L R+YGTAW  ++ L  YL  + E+EKRD
Sbjct: 184 PHVPSTGKIKAF-KLTKVAGAYWRGDASNEQLQRVYGTAWANKKALKAYLNRIAEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHL 304
           HRK+A+++ LFH+ E+  G++FWH  GW I+QT+  YMR +++   YEEI TPQ++D  L
Sbjct: 243 HRKIAKKLGLFHLQEEAPGMVFWHPAGWVIYQTIERYMREQQLAYGYEEIKTPQLVDYSL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           WQ+SGH D +   MF +K       D R FA+KPMNCP H+ VFN GLKSYR+LP+RLAE
Sbjct: 303 WQRSGHADKFADGMFMLKS------DERDFAVKPMNCPCHIQVFNQGLKSYRDLPLRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNEPSGSLHG+MRVRGF QDDAH+FCT++Q+  E     +++  +Y DFGF +++
Sbjct: 357 FGSCHRNEPSGSLHGIMRVRGFVQDDAHIFCTEDQIQGEVGDFIDMLHDVYADFGFSEVI 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
            +LSTRPE+RVGSDA WD      +      K      +    L GEGAFYGPK E+ LK
Sbjct: 417 YRLSTRPEQRVGSDADWD------RAEAALAKALDAKSLPWEELPGEGAFYGPKIEFSLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D IGR WQ GTIQVDF++P R +A YV     +  PVM+HRAV GS ERFIGI+IE+F+G
Sbjct: 471 DCIGRVWQLGTIQVDFSMPGRLDAQYVAEDGSRKVPVMLHRAVLGSFERFIGILIEHFEG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P WLSP QA++  IT    +YA  +   LK++      D RNE I +KIRE  +KK P
Sbjct: 531 EFPTWLSPQQAVIVNITDKHADYALSVQETLKNNGFRAVCDLRNEKIGFKIRELEMKKTP 590

Query: 605 IIIICGDKEASERSIGIR 622
            II+ GD+E    ++ +R
Sbjct: 591 YIIVVGDQEVESATVSVR 608


>gi|261493242|ref|ZP_05989769.1| threonine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
 gi|261496515|ref|ZP_05992895.1| threonine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261307718|gb|EEY09041.1| threonine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261311092|gb|EEY12268.1| threonine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
          Length = 643

 Score =  634 bits (1636), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 296/641 (46%), Positives = 432/641 (67%), Gaps = 16/641 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPE 65
           +T PDGS ++F    +  +VA+SI   LAK  +A  +NG+  D SD + + S +EIIT +
Sbjct: 4   ITLPDGSQRSFDNPVSVMEVAQSIGAGLAKATIAGRVNGERRDASDIISQDSALEIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHS AH++  A++ ++P+V++AIGP IE+GFYYD D ++  + ++L  +EK+
Sbjct: 64  DEDGLEIIRHSTAHLLGHAIKQLFPDVKMAIGPTIENGFYYDIDLDRSLTQEDLDALEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K+ +S ++AR+ FE + E YK+ IL E+I       LY   E+ D+CR
Sbjct: 124 MLELAKTNYDVVKRPVSWQEARDTFEKRGEPYKMAILDENIERTATPALYHHEEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKL KVAGAYWRGDS   ML RIYGTAW  +++L +YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLQKVAGAYWRGDSKNKMLQRIYGTAWADKKQLAEYLQRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHR++ + +DL+H+ E+  G++FWH  GW IF+ L +++R K+K+ DY+E+  P ++D+ 
Sbjct: 243 DHRRIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW +Y   MF  +  +      R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWQNYADLMFTTQSEN------REYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++  IY  FGF  I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIESEVTSCIKMVYDIYSTFGFTNI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPE R+G DA+WD AE   +G+ + ++N+    +   +  GEGAFYGPK E+ L
Sbjct: 417 AVKLSTRPENRIGDDAMWDRAE---EGLANALRNNG---LEYEIQEGEGAFYGPKIEFAL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D +GR+WQCGT+Q+DF LP R  A YV   + +  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 RDCLGREWQCGTVQLDFALPGRLEASYVAEDNGRRTPVMIHRAILGSIERFIGIITEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P QA+V  IT S  +Y Q++   L    + ++ D RNE + +K+REH+++++
Sbjct: 531 GFFPTWLAPTQAVVMNITDSQADYVQQVVKQLSDAGIRVKADLRNEKVGFKVREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P +++CGDKE +E  + +R           + D + IL  +
Sbjct: 591 PYMLVCGDKEIAEGKVSVRTRKGADLGTYLVSDLVEILKNQ 631


>gi|26989188|ref|NP_744613.1| threonyl-tRNA synthetase [Pseudomonas putida KT2440]
 gi|38258320|sp|Q88K27|SYT_PSEPK RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|24984027|gb|AAN68077.1|AE016439_12 threonyl-tRNA synthetase [Pseudomonas putida KT2440]
 gi|313499446|gb|ADR60812.1| ThrS [Pseudomonas putida BIRD-1]
          Length = 640

 Score =  634 bits (1636), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 287/639 (44%), Positives = 430/639 (67%), Gaps = 15/639 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS ++F    + ++VA SI   LAK  VA  ++GK+ D  D +  + +++IITP+
Sbjct: 4   ITLPDGSQRSFDHAVSVAEVAASIGAGLAKATVAGKVDGKLVDACDLISNDATLQIITPK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  AV+ ++P  ++ IGP+I++GFYYD   E+PF+ +++A IEK+
Sbjct: 64  DEEGLEIIRHSCAHLVGHAVKQLYPTAKMVIGPVIDEGFYYDIAYERPFTPEDMAAIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M E+I +D   +K+     +  ++F+++ E YK+ ++E +P ++ + LY   E+ D+CRG
Sbjct: 124 MMELIEKDYDVVKKMTPRAEVIDVFKARGEDYKLRLVEDMPDEQAMGLYYHEEYVDMCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +T +  K FKL K++GAYWRGD+    L R+YGTAW  +++L  Y+  +EE+EKRD
Sbjct: 184 PHVPNT-RFLKAFKLTKLSGAYWRGDAKNEQLQRVYGTAWADKKQLAAYIQRIEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHL 304
           HRK+ +++DLFH+ E+  G++FWH  GW ++Q L  YMR   +++ Y+EI TPQV+D+ L
Sbjct: 243 HRKIGKQLDLFHLQEEAPGMVFWHANGWTVYQVLEQYMRGVQRENGYQEIKTPQVVDRIL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHW +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYR+LP+RLAE
Sbjct: 303 WERSGHWSNYAENMFT------TSSESRDYAVKPMNCPCHVQVFNQGLKSYRDLPLRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FG+ +RNEPSG+LHG+MRVRGF QDDAH+FCT++Q+  E      L + +YKDFGF  I 
Sbjct: 357 FGACHRNEPSGALHGIMRVRGFVQDDAHIFCTEDQVKKEAADFIKLTLDVYKDFGFSDIA 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +KLSTRP KRVGS+ LWD AE  +   L+      +  +      GEGAFYGPK E+ L+
Sbjct: 417 MKLSTRPAKRVGSEELWDRAETALADALN------ESGLEWEYQPGEGAFYGPKIEFTLR 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D +GR+WQCGT+Q D NLP R +A Y+   + +  PVM+HRA+ GS ERFIG++IE++ G
Sbjct: 471 DCLGRNWQCGTLQYDPNLPERLDASYIAEDNSRVRPVMLHRAILGSFERFIGMLIEHYAG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P WL+P QA++  IT    ++A E+   L       ++D RNE I +KIREH++ K+P
Sbjct: 531 VFPAWLAPTQAVIMNITDKQADFALEVEKSLNGSGFRAKSDLRNEKIGFKIREHTLLKVP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +++ GD+E   +++ +R         + +   + +LT+
Sbjct: 591 YLLVIGDREVETQTVAVRTREGADLGSMPVAQFVELLTQ 629


>gi|260774298|ref|ZP_05883213.1| threonyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
 gi|260611259|gb|EEX36463.1| threonyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
          Length = 642

 Score =  634 bits (1636), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 302/642 (47%), Positives = 427/642 (66%), Gaps = 17/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS + F    +  DVA+SI   LAK  +A  I+G+  D  D +  + S+EIIT +
Sbjct: 4   ITLPDGSQRQFDHPVSTMDVAQSIGPGLAKATIAGRIDGRRVDACDLIEHDASLEIITVK 63

Query: 66  D-PRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  A++ ++P+ ++AIGP I+ GFYYD D +   S ++L +IE+
Sbjct: 64  DEADGLEIVRHSCAHLLGHALKQLYPQAKMAIGPTIDSGFYYDIDLDHSLSQEDLERIEQ 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLC 183
           +M++++      +K  +S ++AR+ FES+ E YK+EIL E++   +   LY   E+ D+C
Sbjct: 124 RMKDLVKTKYAVVKHKVSWQEARDTFESRGEPYKIEILDENVARDDRPGLYHHEEYIDMC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV   G   + FKL+ VAGAYWRG+S+  ML R+YGTA++ ++ L  +L  LEE+ K
Sbjct: 184 RGPHVPHMG-FCQHFKLLSVAGAYWRGNSDNKMLQRVYGTAFHDKKALQAHLTRLEEAAK 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRK+ +++DLFH+ ++  G++FWH  GW IF+ L  ++R K+ + DY+E+  P ++D+
Sbjct: 243 RDHRKIGKQLDLFHMQQEAPGMVFWHHNGWSIFRDLEVFIRHKLTEYDYQEVKGPLMMDR 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+
Sbjct: 303 VLWERSGHWDKYADAMFT------TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRM 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSGSLHG+MRVRGFTQDDAH+FCT++Q+  E      ++   Y  FGFE 
Sbjct: 357 AEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTEDQIQQEVTSCIKMVYDTYNTFGFEN 416

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I VKLSTRPEKRVGSD +WD +E  +K  LD +       I   +  GEGAFYGPK E+ 
Sbjct: 417 IAVKLSTRPEKRVGSDEIWDKSEEALKHSLDAMG------IAYEIQEGEGAFYGPKIEFT 470

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D + R WQCGT+Q+DFNLPSR  A YV   +E+  PVMIHRA+ GS+ERFIGI+IE +
Sbjct: 471 LYDCLDRAWQCGTVQLDFNLPSRLGATYVGESNERLVPVMIHRAILGSLERFIGILIEEY 530

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P QA+V  IT    +YAQE+   L+   +  + D RNE I +KIREH++K+
Sbjct: 531 AGFFPTWLAPEQAVVVNITDKQADYAQEVVQKLQKCGIRAKADLRNEKIGFKIREHTLKR 590

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P +++CGD+E     I +R        K  L D I  +  E
Sbjct: 591 VPYMLVCGDQEMEAGEIAVRTRKGKDLGKFKLDDFITHIQAE 632


>gi|304415438|ref|ZP_07396087.1| threonyl-tRNA synthetase [Candidatus Regiella insecticola LSR1]
 gi|304282702|gb|EFL91216.1| threonyl-tRNA synthetase [Candidatus Regiella insecticola LSR1]
          Length = 652

 Score =  634 bits (1636), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 294/626 (46%), Positives = 431/626 (68%), Gaps = 17/626 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T  DGS + +    +  DVA  I+ SLAK  VA  INGK+ D  D +  +  +  IT +
Sbjct: 4   ITLTDGSQRCYDHAVSAFDVALDIAPSLAKACVAARINGKLADACDLIEADAQLAFITMK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           +  +L +IRHSCAH++  A++ +WP+ ++AIGP+IE+GFYYD D + P + + LA +EK+
Sbjct: 64  ENEALEIIRHSCAHLLGHAIKQLWPDTKMAIGPVIENGFYYDVDLQHPLTENHLALLEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M ++ + +   +K+ +S ++AR+ F ++ E YK  IL E+I   ++  LY   E+ D+CR
Sbjct: 124 MHDLASSNYDVIKKKVSWQEARDAFLARGEDYKTLILDENISRDDHPALYHHQEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKL K++GAYWRGDSN  ML RIYGTAW+ +++L  YL  +EE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLQKISGAYWRGDSNNKMLQRIYGTAWSDKKQLNAYLQKIEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF+ L S++R K+++  Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHHNGWTIFRELESFVRAKLQEYQYQEVKGPLMMDRL 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW ++GHW++Y  NMF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWAKTGHWENYAENMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNE SG+LHGLMRVR FTQDDAH+FCT++Q+  E      +I  +Y+ FGFEKI
Sbjct: 357 EFGSCHRNESSGALHGLMRVRAFTQDDAHIFCTEQQVRAEVNNCIAMIYDMYRVFGFEKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPEKR+GSD +W  AEN +   L      +++ I      GEGAFYGPK E+ L
Sbjct: 417 EVKLSTRPEKRIGSDEIWTAAENDLAAAL------TENGIAFDWQPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF+LP R  A Y++ +S++  PVMIHRA+ GSIERFIGI+IE + 
Sbjct: 471 HDCLDRAWQCGTVQLDFSLPGRLGASYIDENSQRTVPVMIHRAILGSIERFIGILIEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+QA+V  IT   V+YA++I+  L+   + ++TD RNE +  KIREH+++++
Sbjct: 531 GCFPTWLAPVQAVVINITDKHVDYAKKISTALQHAGIRVKTDLRNEKVGLKIREHTLRRV 590

Query: 604 PIIIICGDKEA-SERSIGIRRFGSTT 628
           P +++CGDKE  S   + +R  G+ T
Sbjct: 591 PYMLVCGDKEVESGNKVSVRTLGTRT 616


>gi|78048351|ref|YP_364526.1| threonyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|325927169|ref|ZP_08188432.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Xanthomonas
           perforans 91-118]
 gi|123743902|sp|Q3BRT7|SYT_XANC5 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|78036781|emb|CAJ24474.1| threonyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|325542482|gb|EGD13961.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Xanthomonas
           perforans 91-118]
          Length = 634

 Score =  634 bits (1635), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 291/623 (46%), Positives = 419/623 (67%), Gaps = 20/623 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I +T PDGS + F    +   VA+SI   LAK  +A  ++G++ D SD +  + S+ IIT
Sbjct: 2   INITLPDGSRREFESPVSVMQVAQSIGAGLAKATIAGQVDGQLVDASDVIDHDASLRIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   + +IRHSCAH++  AV+ ++PEV++ IGP+I +GFYYD   E+PF+ D++A IE
Sbjct: 62  AKDAEGVEIIRHSCAHLVGHAVKQLYPEVKMVIGPVIAEGFYYDIYSERPFTPDDMAAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVT---LYRQGEWF 180
           ++MQE+IA+D   +K+     +  E+F  + E YK+ ++E +   E++T   LY   E+ 
Sbjct: 122 QRMQELIAQDYDVIKKVTPRAEVIEVFAQRGEEYKLRLIEDM--SEDITAMGLYYHQEYV 179

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           D+CRGPHV +T +  K FKL +++GAYWRGD+    L RIYGTAW  +++L  Y+  +EE
Sbjct: 180 DMCRGPHVPNT-RFLKAFKLTRISGAYWRGDAKNEQLQRIYGTAWADKKQLDAYILRMEE 238

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQV 299
           ++KRDHR++ +  DLFH+ E+  G++FWH KGW ++Q +  YMR+  +D  Y E+  PQ+
Sbjct: 239 ADKRDHRRIGKAQDLFHLQEEAPGLVFWHPKGWSLWQVVEQYMRKVYRDSGYGEVRCPQI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           LD  LWQ+SGHWD+Y+  MF       T  + RT+A+KPMNCPGHV VFN GL SYR+LP
Sbjct: 299 LDVSLWQKSGHWDNYQDAMFF------TESEKRTYAVKPMNCPGHVQVFNQGLHSYRDLP 352

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R  EFG+ +RNEPSG+LHG++RVRGFTQDD HVFC + Q+ +E    H   +++Y  FG
Sbjct: 353 IRYGEFGACHRNEPSGALHGILRVRGFTQDDGHVFCLESQIESEVTAFHQQALAVYTAFG 412

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F+ I +K++ RPEKR+G DA WD AE  ++  L       Q+      L GEGAFYGPK 
Sbjct: 413 FDDIQIKIALRPEKRLGDDATWDKAEAALRSALGVCGVEWQE------LPGEGAFYGPKI 466

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           EY LKDAIGR WQ GT+QVDF +P R  A YV+ +S+K HPVM+HRA+ GS+ERFIGI+I
Sbjct: 467 EYHLKDAIGRTWQLGTMQVDFMMPGRLGAEYVDENSQKKHPVMLHRAIVGSMERFIGILI 526

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E+  G  P WL+P+Q +V  IT +  EY   +   L +    +  D RNE I YKIREH+
Sbjct: 527 EHHAGAFPSWLAPVQVVVANITDAQAEYVDSVRKTLANQGFRVSADLRNEKIGYKIREHT 586

Query: 600 IKKIPIIIICGDKEASERSIGIR 622
           ++++P +++ GD+E    ++ +R
Sbjct: 587 LQRVPYLLVVGDREKENGAVAVR 609


>gi|317491930|ref|ZP_07950364.1| threonyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316920051|gb|EFV41376.1| threonyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 645

 Score =  634 bits (1635), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 294/641 (45%), Positives = 430/641 (67%), Gaps = 16/641 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  D+A  I   LAK  +A  +NG++ D  DP+  + ++ IIT +
Sbjct: 4   ITLPDGSQRQFDKPVSVMDIAMDIGPGLAKACIAGRVNGELVDACDPITVDANVSIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ +WP  ++AIGP+I++GFYYD D +   + ++L  ++K+
Sbjct: 64  DQEGLEIIRHSCAHLLGHAIKQLWPNTKMAIGPVIDNGFYYDVDLDHTLTQEDLELLDKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+  +D   +K+ +S ++AR+ FE+++E YKV IL E+I   +   LY   E+ D+CR
Sbjct: 124 MHELADKDYDVIKKKVSWQEARDTFEARQEPYKVAILDENISHDDQPGLYHHEEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKL K +GAYWRGDSN  +L RIYGTAW  +++L  YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLQKSSGAYWRGDSNNTVLQRIYGTAWADKKQLNAYLQRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF+ L +++R K+K+ DY+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEAFVRVKLKEYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW++Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+ 
Sbjct: 303 LWEKTGHWENYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMG 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  FGFEKI
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDEVNSCIKMVYDMYSIFGFEKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPEKR+GSD +WD AE  +   L       ++ I      GEGAFYGPK E+ L
Sbjct: 417 AVKLSTRPEKRIGSDEIWDRAEEDLAEAL------KENGIPFEYQPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF+LP R NA YV  ++E+  PVMIHRA+ GS+ERFIGI+ E + 
Sbjct: 471 HDCLDRAWQCGTVQLDFSLPGRLNASYVGENNERLVPVMIHRAILGSMERFIGILTEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+Q  V  IT +  +Y  E+   L++  +  ++D RNE I +KIREH+++++
Sbjct: 531 GFYPTWLAPVQVQVMNITDAQADYVDELTKKLQAAGIRAKSDLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P +++CGDKE     + +R         + + + I  L KE
Sbjct: 591 PYMLVCGDKEVESGKVAVRTRRGKDLGTMDVNEVIEKLQKE 631


>gi|260914069|ref|ZP_05920542.1| threonine-tRNA ligase [Pasteurella dagmatis ATCC 43325]
 gi|260631702|gb|EEX49880.1| threonine-tRNA ligase [Pasteurella dagmatis ATCC 43325]
          Length = 644

 Score =  634 bits (1635), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 297/641 (46%), Positives = 430/641 (67%), Gaps = 16/641 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS + F    +  DVA SI   LAK  +A  +NG+  D  D +  + S+EIIT +
Sbjct: 4   ITLPDGSQRQFEQPVSVMDVAASIGAGLAKACIAGRVNGERKDACDVITNDSSLEIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ ++P V++AIGP IE+GFYYD D ++  + ++L  +EK+
Sbjct: 64  DEDGLEIIRHSCAHLLGHAIKQLFPNVKMAIGPTIENGFYYDVDLDRSLTQEDLDALEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M ++   +   +K+ +S ++AR+ FE + E YK+ IL E+I   +   LY   E+ D+CR
Sbjct: 124 MLDLAKTNYDVVKKVVSWQEARDTFEQRSEPYKMAILDENIARCDTPALYHHEEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKLMKVAGAYWRGDS   ML RIYGTAW  +++L++YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLMKVAGAYWRGDSKNKMLQRIYGTAWADKKQLSEYLTRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ + +DL+H+ E+  G++FWH  GW IF+ L +++R K+K+ DY+E+  P ++D+ 
Sbjct: 243 DHRKIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW +Y   MF  +  +      R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWQNYGDLMFTTQSEN------REYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+ +E      ++  IY  FGFE I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQIESEVTSCIKMVYDIYSTFGFENI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPEKR+G+D +W+      +         + + +   +  GEGAFYGPK E+ L
Sbjct: 417 QVKLSTRPEKRIGADEMWE------RAEAGLAAALAHNGLEYEIQEGEGAFYGPKIEFAL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D++ R+WQCGTIQ+DF LP R NA YV   +++  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 RDSLDREWQCGTIQLDFALPGRLNASYVAEDNDRRTPVMIHRAILGSIERFIGIITEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P QA+V  IT S  EY Q++   L    L +++D RNE I +KIREH+++++
Sbjct: 531 GFFPAWLAPTQAVVMNITDSQSEYVQKVVKTLSDAGLRVKSDLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P +++CGDKE     + +R          ++ + + IL K+
Sbjct: 591 PYMLVCGDKEIEAGKVAVRTRKGADLGTFTIEEFLDILKKQ 631


>gi|118602649|ref|YP_903864.1| threonyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|166225495|sp|A1AWT6|SYT_RUTMC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|118567588|gb|ABL02393.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Candidatus
           Ruthia magnifica str. Cm (Calyptogena magnifica)]
          Length = 632

 Score =  634 bits (1635), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 306/644 (47%), Positives = 442/644 (68%), Gaps = 19/644 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDG+ K F    + + VA+SI  SLAK A+A  ++G++ D S  ++ + ++ IIT  
Sbjct: 4   ITLPDGTQKIFEQVVSVTQVAKSIGLSLAKAALAGEVDGQLVDTSFLIKTDANLAIITAN 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D + L +IRHS AH++A+A Q ++P+ QV IGP+I++GFYYDF  +  FS  +LA+IEK 
Sbjct: 64  DDKGLEIIRHSTAHLLAQATQMLYPKAQVTIGPVIDNGFYYDFVYKDGFSESDLAKIEKN 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M +++ ++    +  +S  +A + F+ K E YK EI+ESIPA + ++LY+QG + DLCRG
Sbjct: 124 MHKLVKQNLKIERFEMSRNEAIQFFKDKGEYYKTEIIESIPAGQTLSLYKQGNFIDLCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV  T ++K F KLMK+AGAYWRGDSN  ML R+YGTAW T+Q+L ++L+ LEE+ +RD
Sbjct: 184 PHVPLTAKLKAF-KLMKLAGAYWRGDSNNEMLQRVYGTAWATKQDLEEHLHRLEEASRRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHL 304
           HRK+ +  DLFHI E+  G+IFWH KGW + Q +  YMR   KD DY+E++TPQ++D+ L
Sbjct: 243 HRKIGKIQDLFHIQEEAPGMIFWHAKGWTLCQLIEQYMRGIFKDNDYQEVHTPQLIDKSL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHW+ +   MF     +      R +A+KPMNCP H+ ++N GLKSYR+LP+RLAE
Sbjct: 303 WEKSGHWEKFGDTMFTTSSEN------RDYAVKPMNCPAHIQIYNQGLKSYRDLPLRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNEPSG+LHG+MRVR F QDD H+FCT EQ+  E     +L  ++YK FGF+K+ 
Sbjct: 357 FGSCHRNEPSGTLHGIMRVRNFVQDDGHIFCTPEQIQVEVSTFIDLTFAVYKHFGFDKVD 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLD--TIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           +KLSTRPE  VGSD +WD AE  +   LD   IK   Q         GEGAFYGPK E++
Sbjct: 417 IKLSTRPENHVGSDEVWDKAEAALAEALDAKVIKWEFQK--------GEGAFYGPKIEFV 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LKD + R WQCGT+QVDF++P R +A +++ ++ K  PV++HRA+ GS+ERF+GI+IE++
Sbjct: 469 LKDCLERQWQCGTLQVDFSMPERLDAQFIDENNIKQTPVVLHRAILGSLERFVGILIEHY 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
           +G  P WL+PIQA+V  I+    ++  +I   LK   L + +D RNE I +KIREHS+++
Sbjct: 529 EGAYPCWLTPIQAVVINISGKQADFVIDITKKLKKQGLRVISDLRNEKIGFKIREHSLQR 588

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
            P I+I GD+E  +  I +R+ G      +S+   +  + +E L
Sbjct: 589 YPYILIVGDREMEKDQISVRQRGGKDLGVMSIEAFVEKINQEIL 632


>gi|269958355|ref|YP_003328142.1| threonyl-tRNA synthetase [Anaplasma centrale str. Israel]
 gi|269848184|gb|ACZ48828.1| threonyl-tRNA synthetase [Anaplasma centrale str. Israel]
          Length = 636

 Score =  634 bits (1634), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 293/640 (45%), Positives = 435/640 (67%), Gaps = 15/640 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
           +I  +FP+ +   F  H TGS+VA ++   +A   VA+ ++G + DL+ P+ ++GS++ +
Sbjct: 3   NITTSFPNKTAAAFHKHVTGSEVASAMFPEIAGSIVALFVDGNLQDLATPISKDGSVDPV 62

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T E    + +IRH  AHIMA AV+ I+P+ ++AIGP IE+GFYYDFD     S  +   I
Sbjct: 63  TIESNTGMDIIRHDAAHIMARAVREIFPDTKLAIGPTIENGFYYDFDLSHSLSEKDFEAI 122

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E+KM +IIA+D  F+++    E+A + FE   E YK+EIL  +P  E +T+Y+ GE+ DL
Sbjct: 123 ERKMADIIAKDERFVREVWPRERAIKFFEDLGEHYKLEILSKVPLGEEITVYKHGEFVDL 182

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH  S   VK F KL K++GAYW GD    ML R+YGTAW++ + L  Y++ ++E+E
Sbjct: 183 CRGPHAPSARYVKAF-KLTKISGAYWLGDQKNKMLQRVYGTAWHSSEALASYIHNMQEAE 241

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLD 301
           KRDHRK+A+++  FHI  +  G +FWH KGW I++T+  Y+R K+ K  Y E+ TP +LD
Sbjct: 242 KRDHRKIAKDLGWFHIQNEALGQVFWHDKGWVIYRTIEEYIRCKLEKHGYLEVKTPIMLD 301

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW++SGHW+ ++ NMF V+       D +  A+KPMNCP HV +F   ++SY+ELP+R
Sbjct: 302 RKLWEKSGHWEKFKENMFVVE------NDKKELAIKPMNCPCHVQIFKSKIRSYKELPIR 355

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AEFG  +RNEPSGSL+GLMRVRGFTQDDAH+FCT EQ+ +E L+ + L++ +YKDFGF+
Sbjct: 356 MAEFGMCHRNEPSGSLYGLMRVRGFTQDDAHIFCTHEQVRDEVLRFYELLMEVYKDFGFD 415

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + VKLS RPE R+GSD +WD +E  +   ++ +    Q  IN G    EGAFYGPK E+
Sbjct: 416 SVTVKLSDRPENRIGSDEIWDRSEQSLMEPMNAL--GVQYTINKG----EGAFYGPKLEF 469

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            LKD+IGR+WQCGT+Q+DF LP R  A+Y+    +K  PV+IHRA+ G+IERFIGI+IE+
Sbjct: 470 TLKDSIGREWQCGTVQLDFVLPDRLGAYYIGEDGKKHIPVIIHRAILGTIERFIGILIEH 529

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + GN+P+WL+P+Q  + T++    EYA+ +  +    ++ +E +   E I++KIR+    
Sbjct: 530 YAGNIPVWLAPVQLEILTVSGEVEEYARGLMEMALQKNVRVELNSTEENISHKIRKAIFN 589

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           K+PI+ + G  EA +  + +RR+GS  T +++   A+  L
Sbjct: 590 KVPIVWVVGKSEAGDGCVSVRRYGSGETCRMAADKALKTL 629


>gi|88657649|ref|YP_506841.1| threonyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas]
 gi|123750088|sp|Q2GI92|SYT_EHRCR RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|88599106|gb|ABD44575.1| threonyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas]
          Length = 633

 Score =  634 bits (1634), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 310/641 (48%), Positives = 430/641 (67%), Gaps = 19/641 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           I + F +   K F     G D+   +   L  + +A  +NG++ DLS  + E  + E+IT
Sbjct: 2   INIHFSNNLCKQFHRGIKGHDIVNDLFPKLKNETIAAKVNGELYDLSREIIENCTFEVIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
                 L +IRH  AHIMA+AV+ ++P+VQ+ IGP I+DGFYYDF     FSSD+L  IE
Sbjct: 62  INSEEGLEIIRHDTAHIMAQAVKEMFPDVQITIGPTIKDGFYYDFATNHNFSSDDLEIIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           KKM EII ++  F+++  S E+A + F S  E YKV+I+ +IP+ EN+T+Y+QG + DLC
Sbjct: 122 KKMIEIINKNESFIREVWSREEAIKFFSSIGEDYKVKIISNIPSNENITVYKQGSFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH  ST +  + FKL KV+G+YW+G+SN   L RIYGTAW  ++EL  YL  L E+EK
Sbjct: 182 RGPHAPST-KTSRAFKLTKVSGSYWQGNSNNERLQRIYGTAWRNEEELKLYLNNLIEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQ 302
           RDHRK+ RE++LFHI  +  G IFWH KGW I++ + +Y+R+K++++ Y E+ TP +L++
Sbjct: 241 RDHRKIGRELELFHIQNEACGQIFWHTKGWTIYRIIENYIRKKLENNGYIEVKTPILLNK 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD +R NMF  +  D      +T A+KPMNCP H+ +FN  ++SYR+LP+R+
Sbjct: 301 ELWEKSGHWDKFRENMFLSEAED------KTLAIKPMNCPCHIQIFNSKIRSYRDLPIRM 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFG+ +R E SG+LHGLMRVRGFTQDDAH+FCT+ Q+ +E LK  NL+I IYKDFGF  
Sbjct: 355 AEFGTCHRYEASGALHGLMRVRGFTQDDAHIFCTESQITSEALKFCNLLIEIYKDFGFTD 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL--GEGAFYGPKFE 480
           I+VK S RP+ R GSD +WD AE  +K         S +  N   +L  G+GAFYGPK E
Sbjct: 415 ILVKFSDRPKNRAGSDEIWDKAEAALK--------KSVEVANLSYVLNPGDGAFYGPKLE 466

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           + LKDAIGR+WQCGT+Q+DF LP R  A+Y+ S  +K HPVM+HRA+ G+ ERFIGI+IE
Sbjct: 467 FTLKDAIGREWQCGTLQMDFVLPERLGAYYIGSDGKKHHPVMLHRAILGTFERFIGILIE 526

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +  G  P+WL+PIQ  + TI+  ++ YA  +    + H++ +E D  NE INYKIR H  
Sbjct: 527 HHSGKFPMWLAPIQLSILTISEDSINYANSLKIKAEEHNIRVELDTTNEKINYKIRNHIH 586

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           KK+P+  I G KE  E S+ IR   S     + +  A+  L
Sbjct: 587 KKVPVFWIVGKKEVEENSVSIRYLESNKQHVMPIDKALKTL 627


>gi|88800311|ref|ZP_01115877.1| threonyl-tRNA synthetase [Reinekea sp. MED297]
 gi|88776888|gb|EAR08097.1| threonyl-tRNA synthetase [Reinekea sp. MED297]
          Length = 643

 Score =  634 bits (1634), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 299/619 (48%), Positives = 422/619 (68%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +   +AE I   LA+  +A  ING+  D  D V  + +IEIITP+
Sbjct: 4   ITLPDGSKREFDQPVSIMQIAEDIGPGLARNTLAGRINGERVDACDLVTADSNIEIITPK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ ++P+V++AIGP IE+GFYYD D E   + D+LA++EK+
Sbjct: 64  DDDGLEIIRHSCAHLLGHAIKQLYPDVKMAIGPTIENGFYYDVDMEHRLTEDDLAELEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE-SIPAKENVTLYRQGEWFDLCR 184
           M ++   +   +K+ +S ++A ++F ++ E YK EILE +I   +   LY   E+ D+CR
Sbjct: 124 MLQLAKTNYDVVKKSVSWQEAHDVFVNRGEPYKQEILEQNIAKSDQPGLYHHEEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKLM+++GAYWRGDS+   L RIYGTAW  +++L  +L FLEE+ KR
Sbjct: 184 GPHVPNM-KFCHHFKLMRISGAYWRGDSSNKQLQRIYGTAWADKKQLKAHLLFLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQH 303
           DHRK+ +++DLFH+ ED  G++FWH  GW ++Q +  YMRRK  +  Y+EI TP V+D+ 
Sbjct: 243 DHRKIGKKLDLFHLQEDAPGMVFWHPNGWTMYQVIEQYMRRKQHQHGYQEIKTPMVVDRS 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SGHWD +  +MF       T  + R  A+KPMNCP HV VFN GLKSYR+LP+RLA
Sbjct: 303 LWEKSGHWDKFGDDMFT------THSESRDNAIKPMNCPCHVQVFNQGLKSYRDLPLRLA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNE SG+LHG+MRVRGF QDDAH+FCT+ Q+ +E      ++  +Y DFGF+  
Sbjct: 357 EFGSCHRNEASGALHGIMRVRGFVQDDAHIFCTEGQIQSEVASFIGMLEEVYHDFGFDDY 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           ++KLSTRPE+RVGSD  WD AE  +   L+             +L GEGAFYGPK E+ L
Sbjct: 417 ILKLSTRPEQRVGSDEDWDRAEEALSEALNATGKE------WAILPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           KD++GR WQCGTIQVDF++P R +A YV+ H E+  PVM+HRA+ GS ERF+GI+IE + 
Sbjct: 471 KDSLGRLWQCGTIQVDFSMPGRLDAQYVDEHGERQTPVMLHRAIVGSFERFLGILIEQYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G +P WL+P+QA+V  IT +  E AQ I   L++     + D RNE I +KIREH+I++I
Sbjct: 531 GAMPPWLAPVQAMVLNITDAQAETAQNIVKNLENQGFRAKADLRNEKIGFKIREHTIQRI 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++ GDKE    ++ +R
Sbjct: 591 PYLLVVGDKEVENGTVAVR 609


>gi|224584156|ref|YP_002637954.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|254783535|sp|C0Q647|SYT_SALPC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|224468683|gb|ACN46513.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
          Length = 642

 Score =  634 bits (1634), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 296/641 (46%), Positives = 428/641 (66%), Gaps = 16/641 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D  D +  + ++ IIT +
Sbjct: 4   ITLPDGSQRHYDHPVSPMDVALDIGPGLAKATIAGRVNGELVDACDLIENDATLAIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ +WP  ++AIGP++++GFYYD D ++  + +++  +EK+
Sbjct: 64  DEEGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVVDNGFYYDVDLDRTLTQEDVEALEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+  ++   +K+ +S   ARE F  + E YKV IL E+I   +   LY   E+ D+CR
Sbjct: 124 MHELAEKNYDVIKKKVSWHDARETFVKRGETYKVAILDENIAHDDKPGLYHHEEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKLMK AGAYWRGDSN  ML RIYGTAW  ++ L  YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLMKTAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF+ L  ++R K+K+  Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHWD+Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWDNYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  FGFEKI
Sbjct: 357 EFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQIRDEVNACIRMVYDMYSPFGFEKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRP+KR+GSD +WD AE  +   L+      ++ I     LGEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPDKRIGSDEMWDRAEADLAVALE------ENNIPFEYQLGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF+LPSR +A YV   +E+  PVMIHRA+ GS+ERFIGI+ E F 
Sbjct: 471 YDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+Q +V  IT S   Y  E+   L++  + ++ D RNE I +KIREH+++++
Sbjct: 531 GFFPTWLAPVQVVVMNITDSQSGYVNELTQKLQNAGIRVKADLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P +++CGDKE     + +R         + + D I  L +E
Sbjct: 591 PYMLVCGDKEVEAGKVAVRTRRGKDLGSLDVNDVIEKLQQE 631


>gi|289668713|ref|ZP_06489788.1| threonyl-tRNA synthetase [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 634

 Score =  633 bits (1633), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 291/623 (46%), Positives = 419/623 (67%), Gaps = 20/623 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I +T PDGS + F    +   VA+SI   LAK  +A  ++G++ D SD +  + S+ IIT
Sbjct: 2   INITLPDGSRREFESPVSVMQVAQSIGAGLAKATIAGQVDGQLVDASDVIDHDASLRIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   + +IRHSCAH++  AV+ ++PEV++ IGP+I +GFYYD   E+PF+ +++A IE
Sbjct: 62  AKDAEGVEIIRHSCAHLVGHAVKQLYPEVKMVIGPVIAEGFYYDIYSERPFTPEDMAVIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVT---LYRQGEWF 180
           ++MQE+IA+D   +K+     +  E+F  + E YK+ ++E +   E++T   LY   E+ 
Sbjct: 122 QRMQELIAQDYDVIKKVTPRAEVIEVFAQRGEEYKLRLIEDM--SEDITAMGLYYHQEYV 179

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           D+CRGPHV +T +  K FKL +++GAYWRGD+    L RIYGTAW  +++L  Y+  +EE
Sbjct: 180 DMCRGPHVPNT-RFLKAFKLTRISGAYWRGDAKNEQLQRIYGTAWADKKQLDAYILRMEE 238

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQV 299
           ++KRDHR++ R  DLFH+ E+  G++FWH KGW ++Q +  YMR+  +D  Y E+  PQ+
Sbjct: 239 ADKRDHRRIGRAQDLFHLQEEAPGLVFWHPKGWSLWQVVEQYMRKVYRDSGYGEVRCPQI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           LD  LWQ+SGHWD+Y+  MF       T  + RT+A+KPMNCPGHV VFN GL SYR+LP
Sbjct: 299 LDVSLWQKSGHWDNYQDAMFF------TESEKRTYAVKPMNCPGHVQVFNQGLHSYRDLP 352

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R  EFG+ +RNEPSG+LHG++RVRGFTQDD HVFC + Q+ +E    H   +++Y  FG
Sbjct: 353 IRYGEFGACHRNEPSGALHGILRVRGFTQDDGHVFCLESQIESEVTAFHQQALAVYTAFG 412

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F+ I +K++ RPEKR+G DA WD AE  ++  L       Q+      L GEGAFYGPK 
Sbjct: 413 FDDIQIKIALRPEKRLGDDATWDKAEAALRSALGVCGVEWQE------LPGEGAFYGPKI 466

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           EY LKDAIGR WQ GT+QVDF +P R  A YV+ +S+K HPVM+HRA+ GS+ERFIGI+I
Sbjct: 467 EYHLKDAIGRTWQLGTMQVDFMMPGRLGAEYVDENSQKKHPVMLHRAIVGSMERFIGILI 526

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E+  G  P WL+P+Q +V  IT +  EY   +   L +    +  D RNE I YKIREH+
Sbjct: 527 EHHAGAFPSWLAPVQVVVVNITDAQAEYVDSVRKTLANQGFRVSADLRNEKIGYKIREHT 586

Query: 600 IKKIPIIIICGDKEASERSIGIR 622
           ++++P +++ GD+E    ++ +R
Sbjct: 587 LQRVPYLLVVGDREKENGAVAVR 609


>gi|294636227|ref|ZP_06714641.1| threonine--tRNA ligase [Edwardsiella tarda ATCC 23685]
 gi|291090484|gb|EFE23045.1| threonine--tRNA ligase [Edwardsiella tarda ATCC 23685]
          Length = 622

 Score =  633 bits (1633), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 292/623 (46%), Positives = 426/623 (68%), Gaps = 16/623 (2%)

Query: 25  DVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAE 83
           D+A  I   LAK  +A  +NG++ D  D +  + ++ IIT +D   + ++RHSCAH++  
Sbjct: 2   DIARDIGPGLAKACIAGRVNGELVDACDLIESDATVAIITAKDQEGVEILRHSCAHLLGH 61

Query: 84  AVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSH 143
           A++ +WP+ ++AIGP+I++GFYYD D +   + D+L ++EK+M E+  +D   +K+ +S 
Sbjct: 62  AIKQLWPQTKMAIGPVIDNGFYYDVDLDHTLTQDDLDRLEKRMHELAEKDYDVIKKKVSW 121

Query: 144 EKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMK 202
           ++AR+ F ++ E+YKV IL E+I   +   LY   E+ D+CRGPHV +  +    FKL K
Sbjct: 122 QEARDAFVARDESYKVAILDENISHDDKPGLYHHEEYVDMCRGPHVPNM-RFCHHFKLQK 180

Query: 203 VAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDG 262
            +GAYWRGDSN  ML RIYGTAW  +++L  YL  LEE+ KRDHRK+ +++DL+H+ E+ 
Sbjct: 181 SSGAYWRGDSNNKMLQRIYGTAWADKKQLNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEA 240

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
            G++FWH  GW IF+ L +++R K+K   Y+E+  P ++D+ LW+++GHW++Y+  MF  
Sbjct: 241 PGMVFWHNDGWTIFRELEAFVRMKLKAYQYQEVKGPFMMDRVLWEKTGHWENYKDAMFT- 299

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
                T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+AEFGS +RNEPSGSLHGLM
Sbjct: 300 -----TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLM 354

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALW 441
           RVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  FGFEKI+VKLSTRPEKR+GSD +W
Sbjct: 355 RVRGFTQDDAHIFCTEEQIRDEVNSCIKMVYDMYSTFGFEKIVVKLSTRPEKRIGSDEIW 414

Query: 442 DDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFN 501
           D AE  +   L+      ++ I      GEGAFYGPK E+ L D + R WQCGT+Q+DF+
Sbjct: 415 DRAEEDLAAALE------ENGIPFEYQPGEGAFYGPKIEFTLHDCLDRAWQCGTVQLDFS 468

Query: 502 LPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT 561
           LP R NA YV  ++E+  PVMIHRA+ GS+ERFIGI+ E F G  P WL+P+QA+V  IT
Sbjct: 469 LPGRLNASYVGENNERVVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQAVVMNIT 528

Query: 562 SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
            S  EY +E+   L++  +  ++D RNE I +KIREH+++++P +++CGDKE     + +
Sbjct: 529 DSQAEYVEELNKKLQAAGIRAKSDLRNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAV 588

Query: 622 RRFGSTTTQKVSLLDAIPILTKE 644
           R         +S+ D I  L +E
Sbjct: 589 RTRRGKDLGVMSIDDVIEKLLQE 611


>gi|294626197|ref|ZP_06704803.1| threonyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292599549|gb|EFF43680.1| threonyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
          Length = 634

 Score =  633 bits (1633), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 290/623 (46%), Positives = 420/623 (67%), Gaps = 20/623 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I +T PDGS + F    +   VA+SI   LAK  +A  ++G++ D SD +  + S+ IIT
Sbjct: 2   INITLPDGSRREFESPVSVMQVAQSIGAGLAKATIAGQVDGQLVDASDVIDHDASLRIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   + +IRHSCAH++  AV+ ++PEV++ IGP+I +GFYYD   E+PF+ +++A IE
Sbjct: 62  AKDAEGVEIIRHSCAHLVGHAVKQLYPEVKMVIGPVIAEGFYYDIYSERPFTPEDMAAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVT---LYRQGEWF 180
           ++MQE+IA+D   +K+     +  E+F  + E YK+ ++E +   E++T   LY   E+ 
Sbjct: 122 QRMQELIAQDYDVIKKVTPRAEVIEVFAQRGEEYKLRLIEDM--SEDITAMGLYYHQEYV 179

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           D+CRGPHV +T +  K FKL +++GAYWRGD+    L RIYGTAW  +++L  Y+  +EE
Sbjct: 180 DMCRGPHVPNT-RFLKAFKLTRISGAYWRGDAKNEQLQRIYGTAWADKKQLDAYIMRMEE 238

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQV 299
           ++KRDHR++ +  DLFH+ E+  G++FWH KGW ++Q +  YMR+  +D  Y E+  PQ+
Sbjct: 239 ADKRDHRRIGKAQDLFHLQEEAPGLVFWHPKGWSLWQVVEQYMRKVYRDSGYGEVRCPQI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           LD  LWQ+SGHWD+Y+  MF       T  + RT+A+KPMNCPGHV VFN GL SYR+LP
Sbjct: 299 LDVSLWQKSGHWDNYQDAMFF------TESEKRTYAVKPMNCPGHVQVFNQGLHSYRDLP 352

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R  EFG+ +RNEPSG+LHG++RVRGFTQDD HVFC + Q+ +E    H   +++Y  FG
Sbjct: 353 IRYGEFGACHRNEPSGALHGILRVRGFTQDDGHVFCLESQIESEVTAFHQQALAVYTAFG 412

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F+ I +K++ RPEKR+G DA WD AE+ ++  L       Q+      L GEGAFYGPK 
Sbjct: 413 FDDIQIKIALRPEKRLGDDATWDKAESALRSALGVCGVEWQE------LPGEGAFYGPKI 466

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           EY LKDAIGR WQ GT+QVDF +P R  A YV+ +S+K HPVM+HRA+ GS+ERFIGI+I
Sbjct: 467 EYHLKDAIGRTWQLGTMQVDFMMPGRLGAEYVDENSQKKHPVMLHRAIVGSMERFIGILI 526

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E+  G  P WL+P+Q +V  IT +  EY   +   L +    +  D RNE I YKIREH+
Sbjct: 527 EHHAGAFPSWLAPVQVVVANITDAQAEYVDSVRKTLANQGFRVSADLRNEKIGYKIREHT 586

Query: 600 IKKIPIIIICGDKEASERSIGIR 622
           ++++P +++ GD+E    ++ +R
Sbjct: 587 MQRVPYLLVVGDREKENGAVAVR 609


>gi|294667581|ref|ZP_06732796.1| threonyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|292602701|gb|EFF46137.1| threonyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
          Length = 634

 Score =  633 bits (1632), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 290/623 (46%), Positives = 420/623 (67%), Gaps = 20/623 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I +T PDGS + F    +   VA+SI   LAK  +A  ++G++ D SD +  + S+ IIT
Sbjct: 2   INITLPDGSRREFESPVSVMQVAQSIGAGLAKATIAGQVDGQLVDASDVIDHDASLRIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   + +IRHSCAH++  AV+ ++PEV++ IGP+I +GFYYD   E+PF+ +++A IE
Sbjct: 62  AKDAEGVEIIRHSCAHLVGHAVKQLYPEVKMVIGPVIAEGFYYDIYSERPFTPEDMAAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVT---LYRQGEWF 180
           ++MQE+IA+D   +K+     +  E+F  + E YK+ ++E +   E++T   LY   E+ 
Sbjct: 122 QRMQELIAQDYDVIKKVTPRAEVIEVFAQRGEEYKLRLIEDM--SEDITAMGLYYHQEYV 179

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           D+CRGPHV +T +  K FKL +++GAYWRGD+    L RIYGTAW  +++L  Y+  +EE
Sbjct: 180 DMCRGPHVPNT-RFLKAFKLTRISGAYWRGDAKNEQLQRIYGTAWADKKQLDAYILRMEE 238

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQV 299
           ++KRDHR++ +  DLFH+ E+  G++FWH KGW ++Q +  YMR+  +D  Y E+  PQ+
Sbjct: 239 ADKRDHRRIGKAQDLFHLQEEAPGLVFWHPKGWSLWQVVEQYMRKVYRDSGYGEVRCPQI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           LD  LWQ+SGHWD+Y+  MF       T  + RT+A+KPMNCPGHV VFN GL SYR+LP
Sbjct: 299 LDVSLWQKSGHWDNYQDAMFF------TESEKRTYAVKPMNCPGHVQVFNQGLHSYRDLP 352

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R  EFG+ +RNEPSG+LHG++RVRGFTQDD HVFC + Q+ +E    H   +++Y  FG
Sbjct: 353 IRYGEFGACHRNEPSGALHGILRVRGFTQDDGHVFCLESQIESEVTAFHQQALAVYTAFG 412

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F+ I +K++ RPEKR+G DA WD AE+ ++  L       Q+      L GEGAFYGPK 
Sbjct: 413 FDDIQIKIALRPEKRLGDDATWDKAESALRSALGVCGVEWQE------LPGEGAFYGPKI 466

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           EY LKDAIGR WQ GT+QVDF +P R  A YV+ +S+K HPVM+HRA+ GS+ERFIGI+I
Sbjct: 467 EYHLKDAIGRTWQLGTMQVDFMMPGRLGAEYVDENSQKKHPVMLHRAIVGSMERFIGILI 526

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E+  G  P WL+P+Q +V  IT +  EY   +   L +    +  D RNE I YKIREH+
Sbjct: 527 EHHAGAFPSWLAPVQVVVANITDAQAEYVDSVRKTLANQGFRVSADLRNEKIGYKIREHT 586

Query: 600 IKKIPIIIICGDKEASERSIGIR 622
           ++++P +++ GD+E    ++ +R
Sbjct: 587 MQRVPYLLVVGDREKENGAVAVR 609


>gi|326386620|ref|ZP_08208242.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Novosphingobium
           nitrogenifigens DSM 19370]
 gi|326208935|gb|EGD59730.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Novosphingobium
           nitrogenifigens DSM 19370]
          Length = 663

 Score =  633 bits (1632), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 305/665 (45%), Positives = 429/665 (64%), Gaps = 16/665 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M   +K+T PDGS++      T +++A +I   LAK A+   ++G++ D++ P+ R+ ++
Sbjct: 1   MSEVLKITLPDGSVREVAPGTTPAEIAAAIGPGLAKAAIGARVDGELYDITRPLTRDAAL 60

Query: 60  EIITPED-PRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF-DKEQPFSSD 117
            ++T  D   +L ++RH  AH++AEAVQ+++P  Q+  GP  +DGFYYDF   E+PF+ +
Sbjct: 61  ALVTARDEADALELVRHDFAHVLAEAVQALFPGTQITFGPATDDGFYYDFAPAERPFTEE 120

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +L  IE KM+EIIA D P  ++  +       +E+  E +K +    +P  E +T+Y  G
Sbjct: 121 DLPVIEAKMREIIAADKPLRREAWTRADLIARWEAAGETFKAQWAAELPEGEELTVYWSG 180

Query: 178 -EWFDLCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
            +WFD+CRGPH+ STG++    FKL +V+GAYWRGD N  MLSRIYGT W  +++L  +L
Sbjct: 181 SDWFDMCRGPHLASTGKLDPAAFKLTRVSGAYWRGDQNNAMLSRIYGTGWLNKKQLDAHL 240

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEI 294
             LEE+ KRDHRKL +EMDLFH+  +  G +FWH KG++I++ L +YMRR I    Y E+
Sbjct: 241 TRLEEAAKRDHRKLGQEMDLFHLQAEAHGSVFWHPKGYRIWRELEAYMRRAIDGAGYREV 300

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD--------LRTFALKPMNCPGHVA 346
            TPQV+D   W+ SGHW  YR NMF +      ++D            ALKPMNCP HV 
Sbjct: 301 KTPQVMDARQWEASGHWGKYRENMFVIPDEVPNVEDEGPLVSDDAAWMALKPMNCPAHVL 360

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           +F  G+KSYRELP+R  E G  +RNEP G+LHGLMRVR FTQDDAH+FC ++Q+  E   
Sbjct: 361 IFRQGIKSYRELPLRFYENGCCHRNEPHGALHGLMRVRQFTQDDAHIFCREDQIVEEVRA 420

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
              L   IYKDFGF    +KL+ RPEKR GSD +WD AE  ++  +     ++ +     
Sbjct: 421 FCELADRIYKDFGF-TYAIKLALRPEKRFGSDEMWDQAEAELRNAVAAAGLATPE-YGWE 478

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
            L GEGAFY PK E+ L DAIGR WQ GTIQ D  LP R +A Y+    E+  PVM+HRA
Sbjct: 479 ELPGEGAFYAPKLEWHLTDAIGRTWQVGTIQSDRVLPERLDASYIGEDGERHRPVMLHRA 538

Query: 527 VFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF 586
           +FGS ERFIGI+IE+F G LP+WL+P+QA+V TI S A  YAQE    L +  + +E D 
Sbjct: 539 IFGSYERFIGILIEHFAGKLPVWLAPVQAVVATIVSDADGYAQETVQTLAAAGIRVEADT 598

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           RNE INYK+REHS++K+P +++ G +EA E ++ +RR G    + + L +AI ++  E+ 
Sbjct: 599 RNEKINYKVREHSLQKVPFLLVVGKREAEEGTVAVRRLGEQQQKVLPLAEAIALIKGEAT 658

Query: 647 PPDCQ 651
            PD +
Sbjct: 659 APDLR 663


>gi|21231898|ref|NP_637815.1| threonyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66767974|ref|YP_242736.1| threonyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|188991100|ref|YP_001903110.1| threonyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. B100]
 gi|25453287|sp|Q8P7Z2|SYT_XANCP RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|81306049|sp|Q4UW57|SYT_XANC8 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|229558465|sp|B0RRG9|SYT_XANCB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|21113622|gb|AAM41739.1| threonyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66573306|gb|AAY48716.1| threonyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|167732860|emb|CAP51054.1| unnamed protein product [Xanthomonas campestris pv. campestris]
          Length = 636

 Score =  633 bits (1632), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 291/627 (46%), Positives = 420/627 (66%), Gaps = 21/627 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP  I +T PDGS + F    +   VA+SI   LAK  +A  ++G++ D SD +  + S+
Sbjct: 1   MPM-ITITLPDGSRREFDAPVSVMQVAQSIGAGLAKATIAGQVDGQLVDASDLIEHDASL 59

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   + +IRHSCAH++  AV+ ++P+V++ IGP+I +GFYYD   E+PF+ +++
Sbjct: 60  RIITAKDAEGVEIIRHSCAHLVGHAVKQLYPDVKMVIGPVIAEGFYYDIYSERPFTPEDM 119

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVT---LYRQ 176
           A IE++MQ++IA+D   +K+     +  E+F  + E YK+ ++E +   +++T   LY  
Sbjct: 120 AAIEQRMQQLIAQDYDVIKKVTPRAEVIEVFAQRGEEYKLRLIEDM--SDDITAMGLYYH 177

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
            E+ D+CRGPHV +T +  K FKL +++GAYWRGD+    L RIYGTAW  +++L  Y+ 
Sbjct: 178 QEYVDMCRGPHVPNT-RFLKAFKLTRISGAYWRGDAKNEQLQRIYGTAWADKKQLDAYIL 236

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEIN 295
            +EE++KRDHRK+ +  DLFH+ E+  G++FWH KGW ++Q +  YMR+  +D  Y E+ 
Sbjct: 237 RMEEADKRDHRKIGKAQDLFHLQEEAPGLVFWHPKGWSLWQVVEQYMRKVYRDSGYGEVR 296

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
            PQ+LD  LWQ+SGHWD+Y+  MF       T  + RT+A+KPMNCPGHV VFN GL SY
Sbjct: 297 CPQILDVSLWQKSGHWDNYQDAMFF------TESEKRTYAVKPMNCPGHVQVFNQGLHSY 350

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           R+LP+R  EFG+ +RNEPSG+LHG++RVRGFTQDD HVFC + Q+  E    H   +++Y
Sbjct: 351 RDLPIRYGEFGACHRNEPSGALHGILRVRGFTQDDGHVFCLESQIEAEVTAFHQQALAVY 410

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
             FGF+ I +K++ RPEKR+G DA WD AE  ++  L       Q+      L GEGAFY
Sbjct: 411 TAFGFDDIQIKIALRPEKRLGDDATWDKAEAALRSALGVCGVEWQE------LPGEGAFY 464

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK EY LKDAIGR WQ GT+QVDF +P R  A YV+ HS+K HPVM+HRA+ GS+ERFI
Sbjct: 465 GPKIEYHLKDAIGRTWQLGTMQVDFMMPGRLGAEYVDEHSQKKHPVMLHRAIVGSMERFI 524

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
           GI+IE+  G  P WL+P+Q +V  IT +  EY   +   L +    +  D RNE I YKI
Sbjct: 525 GILIEHHAGAFPAWLAPVQVVVANITDAQAEYVDSVRKTLANQGFRVSADLRNEKIGYKI 584

Query: 596 REHSIKKIPIIIICGDKEASERSIGIR 622
           REH+++++P +++ GD+E    ++ +R
Sbjct: 585 REHTLQRVPYLLVVGDREKENGAVAVR 611


>gi|90579635|ref|ZP_01235444.1| threonyl-tRNA synthetase [Vibrio angustum S14]
 gi|90439209|gb|EAS64391.1| threonyl-tRNA synthetase [Vibrio angustum S14]
          Length = 643

 Score =  632 bits (1631), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 300/642 (46%), Positives = 429/642 (66%), Gaps = 17/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  DVA SI   LAK  +A  ++G   D  D +  + S+EIIT +
Sbjct: 4   ITLPDGSQRQFDAPVSTMDVALSIGPGLAKATIAGRVDGVRVDACDLIENDASLEIITAK 63

Query: 66  DP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  A++ ++P+ ++AIGP I++GFYYD D EQ  + ++L  IEK
Sbjct: 64  DEVDGLEIVRHSCAHLLGHAIKQLYPDAKMAIGPTIDNGFYYDIDLEQSLTQEDLEVIEK 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLC 183
           +M E+       +K+ +S ++AR+ F+++ E YK+EIL E++   +   LY   E+ D+C
Sbjct: 124 RMVELAKTKYQVVKKKVSWQEARDAFDARGETYKIEILDENVARDDRPGLYHHEEYIDMC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV   G  + F KL+ VAGAYWRG+S+  ML RIYGTA++ ++ L  +L  LEE+ K
Sbjct: 184 RGPHVPHMGFCQNF-KLLSVAGAYWRGNSDNKMLQRIYGTAFHDKKALKAHLTRLEEAAK 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRK+ +++DLFH+ ++  G++FWH  GW IF+ L  ++R K+ + DY+E+  P ++D+
Sbjct: 243 RDHRKIGKQLDLFHMQQEAPGMVFWHHNGWTIFRELEVFIREKLNEYDYQEVKGPLMMDR 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+
Sbjct: 303 VLWERSGHWDKYADAMFT------TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRM 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSGSLHG+MRVRGFTQDDAH+FCT+ Q+  E      ++   YK FGF+ 
Sbjct: 357 AEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTEAQVQQEVTSCIEMVYDTYKTFGFDN 416

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+VKLSTRPEKRVGSDA+WD AE+ +   L++++      I   +  GEGAFYGPK E+ 
Sbjct: 417 IVVKLSTRPEKRVGSDAMWDKAESDLITALESME------IPFEIQEGEGAFYGPKIEFT 470

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D + R WQCGT+Q+DF LP R  A YV   +E+  PVMIHRA+ GS+ERFIGI+IE++
Sbjct: 471 LHDCLDRAWQCGTVQLDFALPERLGATYVGEDNERHTPVMIHRAILGSLERFIGILIEDY 530

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P QA+V  IT +  EY QEI   LK   + +  D RNE I +KIREH++K+
Sbjct: 531 AGFFPTWLAPQQAVVMNITDAQSEYVQEIVEKLKKCGIRVNADLRNEKIGFKIREHTLKR 590

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P +++CGDKE     + +R        K  + + +  + +E
Sbjct: 591 VPFMLVCGDKEVEAGVVAVRTRKGKDLGKFKIDELVAFMQEE 632


>gi|329296183|ref|ZP_08253519.1| threonyl-tRNA synthetase [Plautia stali symbiont]
          Length = 642

 Score =  632 bits (1631), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 288/619 (46%), Positives = 423/619 (68%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +TFPDGS + F    +  D+A  I   LAK  +A  +NG++ D  DP+ R+  + IIT +
Sbjct: 4   ITFPDGSQRVFDCPVSVMDIALDIGPGLAKAGIAGRVNGELVDAVDPITRDAQVAIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ +WP  ++AIGP+I++GFYYD D +   + ++L  +EK+
Sbjct: 64  DEAGLEIIRHSCAHLLGHAIKQLWPNTKMAIGPVIDNGFYYDVDLDHTLTQEDLELLEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M ++   +   +K+ +S ++AR++F ++ E+YK  IL E+I   +   LY   E+ D+CR
Sbjct: 124 MHQLAETNYDVVKKKVSWQEARDVFAARGESYKTTILDENISHDDRPGLYHHEEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKL K++GAYWRG+S+  ML RIYGTAW   ++L  YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLQKISGAYWRGNSDNKMLQRIYGTAWADNKQLAAYLQRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ + +DL+H+ E+  G++FWH  GW IF+ L  ++R K+K+ DY+E+  P ++D+ 
Sbjct: 243 DHRKIGKPLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRTKLKEYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHWD+Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWDNYKEVMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT++Q+ +E      ++  +Y  FGFEKI
Sbjct: 357 EFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEDQVRDEVNSCIRMVYDMYSTFGFEKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+GSD +WD AE      +D  +   ++ I      GEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEKRIGSDEMWDRAE------VDLAEALKENNIPFEYQPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF+LP R +A YV   +++  PVMIHRA+ GS+ERFIGI+ E F 
Sbjct: 471 HDCLDRAWQCGTVQLDFSLPKRLDATYVGETNDRQTPVMIHRAILGSMERFIGILTEEFA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+QA+V  IT    EY  E+   L++  + ++ D RNE I +KIREH+++++
Sbjct: 531 GFFPSWLAPVQAVVMNITDGQAEYVSELTKKLQNAGIRVKADLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++CG+KE     + +R
Sbjct: 591 PYMLVCGEKEVEAGKVAVR 609


>gi|262044121|ref|ZP_06017196.1| threonine-tRNA ligase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259038520|gb|EEW39716.1| threonine-tRNA ligase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 622

 Score =  632 bits (1631), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 288/601 (47%), Positives = 415/601 (69%), Gaps = 16/601 (2%)

Query: 25  DVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAE 83
           DVA  I   LAK  +A  +NG++ D  DP+  + ++ IIT +D   L +IRHSCAH++  
Sbjct: 2   DVALDIGPGLAKATIAGRVNGELVDACDPIESDSTLSIITAKDEEGLEIIRHSCAHLLGH 61

Query: 84  AVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSH 143
           A++ +WP  ++AIGP++++GFYYD D +   + +++  +EK+M E+  ++   +K+ +S 
Sbjct: 62  AIKQLWPNTKMAIGPVVDNGFYYDVDLDHTLTQEDIDALEKRMHELAEKNYDVIKKKVSW 121

Query: 144 EKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMK 202
            +ARE F  + E+YKV IL E+I   +   LY   E+ D+CRGPHV +  +    FKLMK
Sbjct: 122 HEARETFVKRGESYKVSILDENIAHDDKPGLYHHEEYIDMCRGPHVPNM-RFCHHFKLMK 180

Query: 203 VAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDG 262
            AGAYWRGDSN  ML RIYGTAW  ++ L  YL  LEE+ KRDHRK+ +++DL+H+ E+ 
Sbjct: 181 TAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEA 240

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
            G++FWH  GW IF+ L +++R K+K+  Y+E+  P ++D+ LW+++GHWD+Y+  MF  
Sbjct: 241 PGMVFWHNDGWTIFRELETFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFT- 299

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
                T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+AEFGS +RNEPSG+LHGLM
Sbjct: 300 -----TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGLM 354

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALW 441
           RVRGFTQDDAH+FCT++Q+ +E      ++  +Y  FGFEKI+VKLSTRPEKR+GSD  W
Sbjct: 355 RVRGFTQDDAHIFCTEDQVRDEVNACIRMVYDMYSTFGFEKIVVKLSTRPEKRIGSDETW 414

Query: 442 DDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFN 501
           D AE  +   L+      ++ I     LGEGAFYGPK E+ L D + R WQCGT+Q+DF+
Sbjct: 415 DRAEADLAVALE------ENNIPFEYQLGEGAFYGPKIEFTLYDCLDRAWQCGTVQLDFS 468

Query: 502 LPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT 561
           LP R +AFYV  ++E+  PVMIHRA+ GS+ERFIGI+ E F G  P W++P+Q +V  IT
Sbjct: 469 LPQRLSAFYVGENNERQVPVMIHRAILGSLERFIGILTEEFAGFFPTWIAPVQVVVMNIT 528

Query: 562 SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
            S  EY  E+   L++  + ++ D RNE I +KIREH+++++P +++CGDKE     + +
Sbjct: 529 DSQAEYVNELTRKLQNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAV 588

Query: 622 R 622
           R
Sbjct: 589 R 589


>gi|261821451|ref|YP_003259557.1| threonyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
 gi|261605464|gb|ACX87950.1| threonyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
          Length = 642

 Score =  632 bits (1631), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 290/640 (45%), Positives = 430/640 (67%), Gaps = 19/640 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS +++    +  DVA  I   LAK  +A  ++G++ D SD +  +  + IIT +
Sbjct: 4   ITLPDGSQRHYDHAVSPLDVALDIGPGLAKACIAGRVDGELVDASDKIDTDAQLAIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D ++  + +++  +EK+
Sbjct: 64  DEAGLEIIRHSCAHLLGHAIKQLWPDTKMAIGPVIDNGFYYDVDIDRTLTQEDIELLEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   D   +K+ +S ++AR+ F ++ E YK+ IL E+I   +   LY   E+ D+CR
Sbjct: 124 MHELADTDYDVIKKKVSWQEARDAFAARGETYKIAILDENISHDDRPGLYHHEEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKL K +GAYWRGDS   ML RIYGTAW  +++L  YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLQKTSGAYWRGDSKNKMLQRIYGTAWADKKQLASYLQRLEEASKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF+ L +++R K+K   Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEAFVRMKLKSYQYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           +W+++GHW++Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 MWEKTGHWENYKEAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  FGFEKI
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQVRDEVNSCIKMVYDMYSTFGFEKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+GSD +WD AE  +   L      +++ I      GEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEKRIGSDEMWDRAEADLAAAL------TENNIEFAYQPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF+LP R NA YV   +E+  PVMIHRA+ GS+ERFIGI+ E F 
Sbjct: 471 HDCLDRAWQCGTVQLDFSLPGRLNASYVGESNERQVPVMIHRAILGSMERFIGILTEEFA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+Q ++  IT S  +Y  E+   L+   + ++ D RNE I +KIREH+++++
Sbjct: 531 GFFPTWLAPVQVVIMNITDSQADYVNELTQKLQEAGIRVKADLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           P +++CGDKE     + +R   +   + +  LD   +++K
Sbjct: 591 PYMLVCGDKEVEAGKVAVR---TRRGKDLGSLDVSEVISK 627


>gi|167626332|ref|YP_001676832.1| threonyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|189083609|sp|B0TY89|SYT_FRAP2 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|167596333|gb|ABZ86331.1| threonyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
          Length = 635

 Score =  632 bits (1631), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 300/642 (46%), Positives = 423/642 (65%), Gaps = 15/642 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           I + FPDGSI+ F        +A+SIS SLAK  V   I+ K+ D  D +  +  + +IT
Sbjct: 2   INIKFPDGSIREFESGVNSLQIAKSISPSLAKITVGAYIDNKLSDAKDVINHDCELRLIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   L ++RHSCAH++A AV+ ++P  +V IGP+I++GFYYDF  ++     +LA IE
Sbjct: 62  TKDTEGLEILRHSCAHLLANAVKELYPNTEVTIGPVIDNGFYYDFSFKETIGEADLANIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M+EI  + S    + +S E A   F+++ E YKV+I+ESIPA + + +Y QG++ DLC
Sbjct: 122 KRMKEIAKKGSSISYKVVSKEDAIAFFKAQGENYKVDIIESIPADQQIKIYTQGDFSDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV ST  +K F KL K+AGAYWRGDSN  ML+RIYGT W T+++L QYL+ LEE+EK
Sbjct: 182 RGPHVPSTAAIKAF-KLTKLAGAYWRGDSNNEMLTRIYGTCWATKEDLDQYLHMLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRK+ + +DLFH  ED  G+ FWH  G +I++ +  YMR   K     EI TP + D 
Sbjct: 241 RDHRKIGKALDLFHFQEDSPGIAFWHDNGVRIWREVEDYMRASNKKYGCGEIRTPLIADF 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGH   Y  NMFA K  +      R FA++PMNCP  V V+N  L SYR+LP+R+
Sbjct: 301 SLWEKSGHASKYAENMFATKSEN------RDFAIRPMNCPTCVQVYNTKLHSYRDLPIRM 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFG V+RNEPSGSLHGLMRVR FTQDD H+FC  EQ+  E + +      +YKDFGF  
Sbjct: 355 AEFGIVHRNEPSGSLHGLMRVRSFTQDDGHIFCAPEQVEEEVILMVKQCFEVYKDFGFND 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             VK++ RPE R+G+D  WD +E ++K  LD       + +   +L GEGAFYGPK E+ 
Sbjct: 415 FTVKIALRPENRIGNDETWDKSEQMLKNALDA------NNVAYELLPGEGAFYGPKIEFH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LKDAIGR WQCGTIQ+DF++P R  A Y++ +  K  PVM+HRA+ GS+ERFIG++IE++
Sbjct: 469 LKDAIGRSWQCGTIQLDFSMPDRLGATYIDKNGNKQVPVMLHRAIVGSLERFIGMLIEHY 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            GN+PLWL+P+Q  V  I++   EY Q++   L+ + +  + D RNE I +KIREH++ +
Sbjct: 529 AGNMPLWLTPVQVAVMGISNHQDEYCQKVFETLEKNGIRAKLDLRNEKIGFKIREHTLLR 588

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P ++I G  E  +  + +R+       ++S+ D    L ++
Sbjct: 589 VPYLVILGKSEQEQEIVTVRKHNGEDLGQMSIGDFCAFLNEQ 630


>gi|289661762|ref|ZP_06483343.1| threonyl-tRNA synthetase [Xanthomonas campestris pv. vasculorum
           NCPPB702]
          Length = 636

 Score =  632 bits (1631), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 292/627 (46%), Positives = 421/627 (67%), Gaps = 21/627 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP  I +T PDGS + F    +   +A+SI   LAK  +A  ++G++ D SD +  + S+
Sbjct: 1   MPM-INITLPDGSRREFESPVSVMQIAQSIGAGLAKATIAGQVDGQLVDASDVIDHDASL 59

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   + +IRHSCAH++  AV+ ++PEV++ IGP+I +GFYYD   E+PF+ +++
Sbjct: 60  RIITAKDAEGVEIIRHSCAHLVGHAVKQLYPEVKMVIGPVIAEGFYYDIYSERPFTPEDM 119

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVT---LYRQ 176
           A IE++MQE+IA+D   +K+     +  E+F  + E YK+ ++E +   E++T   LY  
Sbjct: 120 AVIEQRMQELIAQDYDVIKKVTPRAEVIEVFAQRGEEYKLRLIEDM--SEDITAMGLYYH 177

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
            E+ D+CRGPHV +T +  K FKL +++GAYWRGD+    L RIYGTAW  +++L  Y+ 
Sbjct: 178 QEYVDMCRGPHVPNT-RFLKAFKLTRISGAYWRGDAKNEQLQRIYGTAWADKKQLDAYIL 236

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEIN 295
            +EE++KRDHR++ R  DLFH+ E+  G++FWH KGW ++Q +  YMR+  +D  Y E+ 
Sbjct: 237 RMEEADKRDHRRIGRAQDLFHLQEEAPGLVFWHPKGWSLWQVVEQYMRKVYRDSGYGEVR 296

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
            PQ+LD  LWQ+SGHWD+Y+  MF       T  + RT+A+KPMNCPGHV VFN GL SY
Sbjct: 297 CPQILDVSLWQKSGHWDNYQDAMFF------TESEKRTYAVKPMNCPGHVQVFNQGLHSY 350

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           R+LP+R  EFG+ +RNEPSG+LHG++RVRGFTQDD HVFC + Q+ +E    H   +++Y
Sbjct: 351 RDLPIRYGEFGACHRNEPSGALHGILRVRGFTQDDGHVFCLESQIESEVTAFHQQALAVY 410

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
             FGF+ I +K++ RPEKR+G DA WD AE  ++  L       Q+      L GEGAFY
Sbjct: 411 TAFGFDDIQIKIALRPEKRLGDDATWDKAEAALRSALGVCGVEWQE------LPGEGAFY 464

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK EY LKDAIGR WQ GT+QVDF +P R  A YV+ +S+K HPVM+HRA+ GS+ERFI
Sbjct: 465 GPKIEYHLKDAIGRTWQLGTMQVDFMMPGRLGAEYVDENSQKKHPVMLHRAIVGSMERFI 524

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
           GI+IE+  G  P WL+P+Q +V  IT +  EY   +   L +    +  D RNE I YKI
Sbjct: 525 GILIEHHAGAFPSWLAPVQVVVVNITDAQAEYVDSVRKTLANQGFRVSADLRNEKIGYKI 584

Query: 596 REHSIKKIPIIIICGDKEASERSIGIR 622
           REH+++++P +++ GD+E    ++ +R
Sbjct: 585 REHTLQRVPYLLVVGDREKENGAVAVR 611


>gi|260770313|ref|ZP_05879246.1| threonyl-tRNA synthetase [Vibrio furnissii CIP 102972]
 gi|260615651|gb|EEX40837.1| threonyl-tRNA synthetase [Vibrio furnissii CIP 102972]
          Length = 642

 Score =  632 bits (1630), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 301/642 (46%), Positives = 430/642 (66%), Gaps = 17/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  +VA+SI   LAK  +A  ++G   D  D +  + S+EIIT +
Sbjct: 4   ITLPDGSQRQFDNPVSTLEVAQSIGPGLAKATIAGRVDGVRVDACDLIENDASLEIITAK 63

Query: 66  DP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  A++ ++P+ ++AIGP I++GFYYD D E+  S D++ +IE 
Sbjct: 64  DEVDGLEIVRHSCAHLLGHALKQLYPQAKMAIGPTIDNGFYYDIDLEESLSQDDIEKIEA 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWFDLC 183
           +M+E+       +K+ +S ++AR+ FE+++E YK+EIL+   A+++   LY   E+ D+C
Sbjct: 124 RMKELAKTKYQVVKKKVSWQEARDTFEARQEPYKMEILDQNVARDDRPGLYHHEEYIDMC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV   G   + FKL+ VAGAYWRGDSN  ML RIYGTA++ ++ L  +L  LEE+ K
Sbjct: 184 RGPHVPHMG-FCQHFKLLNVAGAYWRGDSNNKMLQRIYGTAFHDKKALQAHLTRLEEAAK 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRK+ +++DLFH+ ++  G++FWH  GW IF+ L  ++R K+ +  Y+E+  P ++D+
Sbjct: 243 RDHRKIGKQLDLFHMQQEAPGMVFWHHNGWSIFRDLEVFIRHKLNEYGYQEVKGPLMMDR 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+
Sbjct: 303 VLWERSGHWDKYADAMFT------TSSENRDYAIKPMNCPGHVQIFNQGLKSYRDLPLRM 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSGSLHG+MRVRGFTQDDAH+FCT++Q+  E      ++   Y  FGF+ 
Sbjct: 357 AEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTEDQIQEEVTSCIKMVYDTYTTFGFDN 416

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I VKLSTRPEKRVGSD +WD +E  +K  L+ +       I   +  GEGAFYGPK E+ 
Sbjct: 417 IAVKLSTRPEKRVGSDEIWDKSEEALKHSLEAMG------IAYEIQEGEGAFYGPKIEFT 470

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D + R WQCGT+Q+DFNLPSR  A YV  ++E+  PVMIHRA+ GS+ERFIGI+IE +
Sbjct: 471 LYDCLDRAWQCGTVQLDFNLPSRLGATYVGENNERLVPVMIHRAILGSLERFIGILIEEY 530

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P QA+V  IT    +YAQE+A  L+   +  + D RNE I +KIREH++K+
Sbjct: 531 AGFFPTWLAPEQAVVVNITDKQADYAQEVAQKLQKCGIRAKADLRNEKIGFKIREHTLKR 590

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P +++CGD+E     I +R        K  L D +  +  E
Sbjct: 591 VPYMLVCGDQEMEAGEIAVRTRKGKDLGKFKLDDFVSHIQTE 632


>gi|146307004|ref|YP_001187469.1| threonyl-tRNA synthetase [Pseudomonas mendocina ymp]
 gi|166225482|sp|A4XTS1|SYT_PSEMY RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|145575205|gb|ABP84737.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Pseudomonas
           mendocina ymp]
          Length = 640

 Score =  632 bits (1630), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 288/624 (46%), Positives = 423/624 (67%), Gaps = 18/624 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP+   +T PDGS ++F    +  +VA+SI   LAK  +A  +NGK  D  D +  + ++
Sbjct: 1   MPT---ITLPDGSQRSFDHPVSVLEVAQSIGAGLAKATLAGKVNGKQVDACDVIDTDATL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           +IITP+D   L +IRHSCAH++  AV+ ++P  ++ IGP+I++GFYYD   ++PF+ D++
Sbjct: 58  QIITPKDEEGLEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIDEGFYYDIAIDRPFTPDDM 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A IEK+M E+I +D   +K+     +  ELF S+ E YK+ +++ +P ++ + LY   E+
Sbjct: 118 AAIEKRMAELIDKDYDVIKKMTPRAEVIELFRSRGEEYKLRLIDDMPDEKAMGLYFHEEY 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            D+CRGPHV +T +  K FKL +++GAYWRGDS    L RIYGTAW  +++L  Y+  +E
Sbjct: 178 VDMCRGPHVPNT-RFLKAFKLTRISGAYWRGDSKNEQLQRIYGTAWADKKQLAAYIQRIE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQ 298
           E+EKRDHR++ +++DLFH+ E+  G++FWH  GW ++Q L  YMR+  +++ Y E+ TPQ
Sbjct: 237 EAEKRDHRRIGKQLDLFHLQEEAPGMVFWHPNGWTVYQVLEQYMRQVQRENGYVEVRTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHW +Y  NMF       T  + R +A+KPMNCP HV +FN GLKSYR+L
Sbjct: 297 VVDRILWERSGHWSNYAENMFT------TASENRDYAVKPMNCPCHVQIFNQGLKSYRDL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFG+ +RNEPSG+LHG+MRVRGF QDDAH+FCT++Q+  E      L + +Y DF
Sbjct: 351 PLRLAEFGACHRNEPSGALHGIMRVRGFVQDDAHIFCTEDQVKKEAADFIKLTLQVYADF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF  I +KLSTRP KRVGS+ LWD AE  +   L+      +  +      GEGAFYGPK
Sbjct: 411 GFTDIAMKLSTRPAKRVGSEELWDRAEGALADALN------ESGLAWEYQPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ L+D +GR+WQCGT+Q D NLP R +A Y+   + +  PVM+HRA+ GS ERFIG++
Sbjct: 465 IEFTLRDCLGRNWQCGTLQYDPNLPERLDASYIAEDNNRKRPVMLHRAILGSFERFIGML 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE++ G+ P WL+P QA++  IT    ++A+E    L       + D RNE I +KIREH
Sbjct: 525 IEHYAGSFPAWLAPTQAVIMNITDKQADFAREAEKTLNQSGFRAKVDLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIR 622
           ++ K+P +++ GD+E   RS+ +R
Sbjct: 585 TLLKVPYLLVIGDREVETRSVAVR 608


>gi|282599730|ref|ZP_05971662.2| threonine--tRNA ligase [Providencia rustigianii DSM 4541]
 gi|282568410|gb|EFB73945.1| threonine--tRNA ligase [Providencia rustigianii DSM 4541]
          Length = 653

 Score =  632 bits (1630), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 297/640 (46%), Positives = 426/640 (66%), Gaps = 19/640 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  DVA  I   LAK  +A  ++G++ D  + +  +  + IIT +
Sbjct: 15  ITLPDGSQRQFDHAVSVMDVARDIGTGLAKACIAGRVDGELVDACELIEHDAKLSIITSK 74

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ +WP  ++AIGP+I++GFYYD D +   + ++L ++EK+
Sbjct: 75  DDEGLEIIRHSCAHLLGHAIKQLWPNTKMAIGPVIDNGFYYDVDLDYTLTQEDLDKLEKR 134

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   D   +K+ +S  +ARE F  + E YKVEIL ++I   +   LY   E+ D+CR
Sbjct: 135 MLELAKTDYDVVKKRVSWAEARETFVGRGEDYKVEILDQNISQDDRPGLYHHQEYIDMCR 194

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKL KVAGAYWRG+S+  ML RIYGTAW  +++L  YL  LEE+ KR
Sbjct: 195 GPHVPNM-RFCHHFKLQKVAGAYWRGNSDNKMLQRIYGTAWADKKQLAAYLLRLEEAAKR 253

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G+ FWH  GW IF+ L +++R K+K  +Y+E+  P ++D+ 
Sbjct: 254 DHRKIGKQLDLYHMQEEAPGMAFWHNDGWTIFRELETFVRTKLKSYNYQEVKGPFMMDRV 313

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW++Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 314 LWERTGHWENYKDAMFT------TSSENREYCVKPMNCPGHVQIFNQGLKSYRDLPLRMA 367

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT++Q+ +E      +I  +Y  FGFEKI
Sbjct: 368 EFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEDQILSEVTSCIEMIYDVYSTFGFEKI 427

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+G+D +WD AE  +   L +        I      GEGAFYGPK E+ L
Sbjct: 428 VVKLSTRPEKRIGTDDMWDTAEADLANALKS------KGIEFEYQPGEGAFYGPKIEFTL 481

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF LP R NA YV  ++E+  PVMIHRAV GS+ERFIGI+ E + 
Sbjct: 482 YDCLDRAWQCGTVQLDFFLPGRLNASYVGENNERITPVMIHRAVLGSLERFIGILTEEYA 541

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P Q +V  IT +  EY QE+ N L+S  +  + D RNE I +KIREH+++++
Sbjct: 542 GFFPTWLAPQQVVVMNITDTQAEYVQELVNKLQSVGIRAKADLRNEKIGFKIREHTLRRV 601

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           P +++CGDKE     + +R   +   + +  LD    +TK
Sbjct: 602 PYMLVCGDKEVESGKVSVR---TRRGKDLGSLDVDEFMTK 638


>gi|254522893|ref|ZP_05134948.1| threonyl-tRNA synthetase [Stenotrophomonas sp. SKA14]
 gi|219720484|gb|EED39009.1| threonyl-tRNA synthetase [Stenotrophomonas sp. SKA14]
          Length = 633

 Score =  632 bits (1630), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 294/644 (45%), Positives = 425/644 (65%), Gaps = 16/644 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I +T PDGS + F    +  DVA+SI   LAK  +A A++G + D SD +  + S+ IIT
Sbjct: 2   INITLPDGSRREFENPVSVMDVAQSIGAGLAKATIAGAVDGVLVDASDVIDHDASLRIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   + +IRHSCAH++  AV+ ++P+V++ IGP+I +GFYYD   E+PF+ +++A IE
Sbjct: 62  AKDEEGVEIIRHSCAHLVGHAVKQLYPDVKMVIGPVIAEGFYYDIYSERPFTPEDMAAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-ENVTLYRQGEWFDL 182
           K+M E+IA+D   +K+     +  E+F+++ E YK+ ++E +    + + +Y   E+ D+
Sbjct: 122 KRMGELIAQDYDVIKKMTPRAEVVEIFKARGEDYKLRLIEDMSDDIQAMGMYYHQEYVDM 181

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +T +  K FKL +++GAYWRGD+    L RIYGTAW  +++L  Y+  +EE+E
Sbjct: 182 CRGPHVPNT-RFLKAFKLTRISGAYWRGDAQNEQLQRIYGTAWADKKQLEAYIKRIEEAE 240

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLD 301
            RDHR++ ++ DLFH+ E+  G++FWH KGW ++Q +  YMR+   K  Y E+  PQ+LD
Sbjct: 241 MRDHRRIGKQQDLFHLQEEAPGLVFWHPKGWALWQVVEQYMRKVYRKTGYGEVRCPQILD 300

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             LWQ+SGHWD+Y+  MF       T  + RT+ALKPMNCPGHV VFN GL SYR+LP+R
Sbjct: 301 VSLWQKSGHWDNYQDAMFF------TESEKRTYALKPMNCPGHVQVFNQGLHSYRDLPIR 354

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
             EFG+ +RNEPSG+LHG++RVRGFTQDD HVFCT+ Q+  E    H   +++Y+ FGF+
Sbjct: 355 YGEFGACHRNEPSGALHGILRVRGFTQDDGHVFCTENQVEAEVTAFHQQALAVYQHFGFD 414

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
           +I VK++ RPE R+G DA WD AE  ++  L      S + +    L GEGAFYGPK EY
Sbjct: 415 EIQVKIALRPESRLGDDATWDKAEGALRSAL------SSNGVEWQELPGEGAFYGPKIEY 468

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            LKDAIGR WQ GT+QVDF +P R  A YV+ +S+K HPVM+HRA+ GS+ERF+GI+IE+
Sbjct: 469 HLKDAIGRTWQLGTMQVDFMMPGRLGAEYVDENSQKKHPVMLHRAIVGSMERFLGILIEH 528

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G  P WL+P Q +V  IT +  EY   +   L      + +D RNE I YKIREH+++
Sbjct: 529 HAGQFPAWLAPTQVVVANITDAQAEYVSGVTKTLAEQGFRVSSDLRNEKIGYKIREHTLQ 588

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           ++P +++ GD+E    ++ +R         +SL   I  L  E 
Sbjct: 589 RVPYLLVIGDREKENGAVAVRTRSGEDLGSMSLQAFIERLHAEG 632


>gi|238753686|ref|ZP_04615048.1| Threonyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
 gi|238708238|gb|EEQ00594.1| Threonyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
          Length = 642

 Score =  632 bits (1630), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 290/619 (46%), Positives = 423/619 (68%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS ++F    +  DVA  I   LAK  +A  +NG++ D +D +  +  + IIT +
Sbjct: 4   ITLPDGSQRHFDRAVSVLDVALDIGPGLAKACIAGRVNGELMDATDLIESDAQLAIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L ++RHSCAH++  A++ +WP  ++AIGP I++GFYYD D EQ  + ++L  +EK+
Sbjct: 64  DAEGLEILRHSCAHLLGHAIKQLWPNTKMAIGPTIDNGFYYDVDLEQTLTQEDLDLLEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+  +D   +K+ +S ++AR+ F ++ E YKV IL E+I   +   LY   E+ D+CR
Sbjct: 124 MHELADKDYDVIKKKVSWQEARDTFAARGEEYKVAILDENISRDDRPGLYHHEEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKL K +GAYWRGDS   ML RIYGTAW  +++L  YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLQKTSGAYWRGDSKNKMLQRIYGTAWADKKQLNAYLQRLEEAGKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF+ L +++R K+K+  Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELETFVRSKLKEYQYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW++Y  +MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWENYAEHMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSG+LHGLMRVRGFTQDDAHVFCT+EQ+ +E      ++  +Y  FGFEKI
Sbjct: 357 EFGSCHRNEPSGALHGLMRVRGFTQDDAHVFCTEEQVRDEVNSCIKMVYDMYSTFGFEKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+GSD LW  AE+ +   L      +++ I      GEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEKRIGSDELWTRAEDDLAAAL------TENGIPFDYQPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF+LP R +A Y+  ++++  PVMIHRA+ GS+ERFIGI+ E + 
Sbjct: 471 HDCLDRAWQCGTVQLDFSLPGRLSASYIGENNDRQVPVMIHRAILGSMERFIGILTEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P W++P+Q +V  IT S  EY QE+   L+   + ++ D RNE I +KIREH+++++
Sbjct: 531 GFFPTWIAPVQVVVMNITDSQAEYVQEVTKKLQDAGIRVKADLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++CGDKE     + +R
Sbjct: 591 PYMLVCGDKEIETGKVAVR 609


>gi|259908578|ref|YP_002648934.1| threonyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
 gi|224964200|emb|CAX55707.1| Threonyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
 gi|283478547|emb|CAY74463.1| thrS [Erwinia pyrifoliae DSM 12163]
          Length = 642

 Score =  632 bits (1630), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 292/641 (45%), Positives = 429/641 (66%), Gaps = 16/641 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS ++F    +  D+A  I   LAK  +A  +NG++ D  DP+  + S+ IIT +
Sbjct: 4   ITLPDGSQRSFDHAVSVMDIALDIGPGLAKACIAGRVNGELVDAVDPIASDASVAIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D ++  + +++ Q+EK+
Sbjct: 64  DEAGLEIIRHSCAHLLGHAIKQLWPDTKMAIGPVIDNGFYYDVDIDRTLTQEDIEQLEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M ++   +   +K+ +S ++AR+ F ++ E YK+ IL E+I   +   LY   E+ D+CR
Sbjct: 124 MHQLAETNYDVIKKNVSWQEARDAFAARGENYKMTILDENISHDDRPGLYHHQEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKL K++GAYWRGDS+  ML RIYGTAW  +++L  YL  +EE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLQKISGAYWRGDSSNKMLQRIYGTAWADKKQLAAYLLRIEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF+ L  ++R K+K+  Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRTKLKEYQYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHWD+Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWDNYKEAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++   Y  FGFEKI
Sbjct: 357 EFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQVRDEVNSCIKMVYDTYSTFGFEKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+GSD LWD +E  +   L       ++ I      GEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEKRIGSDDLWDRSEADLAAAL------KENDIPFEYQPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF+LP R NA YV   +E+  PVMIHRA+ GS+ERFIGI+ E + 
Sbjct: 471 HDCLDRAWQCGTVQLDFSLPGRLNASYVGESNERQVPVMIHRAILGSMERFIGILTEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+Q +V  IT    EY  E+   L++  +  + D RNE I +KIREH+++++
Sbjct: 531 GFFPTWLAPVQVVVMNITDGQSEYVAELTRKLQNAGIRAKADLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P +++CGDKE     + +R         + + +AI  L  E
Sbjct: 591 PYMLVCGDKEVEAGKVAVRTRRGKDLGSIDVNEAIAKLQDE 631


>gi|310767522|gb|ADP12472.1| threonyl-tRNA synthetase [Erwinia sp. Ejp617]
          Length = 642

 Score =  632 bits (1629), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 292/641 (45%), Positives = 429/641 (66%), Gaps = 16/641 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS ++F    +  D+A  I   LAK  +A  +NG++ D  DP+  + S+ IIT +
Sbjct: 4   ITLPDGSQRSFDHAVSVMDIALDIGPGLAKACIAGRVNGELVDAVDPIAADASVAIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D ++  + +++ Q+EK+
Sbjct: 64  DEAGLEIIRHSCAHLLGHAIKQLWPDTKMAIGPVIDNGFYYDVDLDRTLTQEDIEQLEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M ++   +   +K+ +S ++AR+ F ++ E YK+ IL E+I   +   LY   E+ D+CR
Sbjct: 124 MHQLAETNYDVIKKNVSWQEARDAFAARGENYKMTILDENISHDDRPGLYHHQEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKL K++GAYWRGDS+  ML RIYGTAW  +++L  YL  +EE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLQKISGAYWRGDSSNKMLQRIYGTAWADKKQLAAYLLRIEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF+ L  ++R K+K+  Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRTKLKEYQYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHWD+Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWDNYKEAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++   Y  FGFEKI
Sbjct: 357 EFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQVRDEVNSCIKMVYDTYSTFGFEKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+GSD LWD +E  +   L       ++ I      GEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEKRIGSDDLWDRSEADLAAAL------KENDIPFEYQPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF+LP R NA YV   +E+  PVMIHRA+ GS+ERFIGI+ E + 
Sbjct: 471 HDCLDRAWQCGTVQLDFSLPGRLNASYVGESNERQVPVMIHRAILGSMERFIGILTEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+Q +V  IT    EY  E+   L++  +  + D RNE I +KIREH+++++
Sbjct: 531 GFFPTWLAPVQVVVMNITDGQSEYVAELTRKLQNAGIRAKADLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P +++CGDKE     + +R         + + +AI  L  E
Sbjct: 591 PYMLVCGDKEVEAGKVAVRTRRGKDLGSIDVNEAIAKLQDE 631


>gi|89073900|ref|ZP_01160406.1| threonyl-tRNA synthetase [Photobacterium sp. SKA34]
 gi|89050228|gb|EAR55732.1| threonyl-tRNA synthetase [Photobacterium sp. SKA34]
          Length = 631

 Score =  632 bits (1629), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 298/620 (48%), Positives = 422/620 (68%), Gaps = 17/620 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  DVA SI   LAK  +A  ++G   D  D +  + S+EIIT +
Sbjct: 4   ITLPDGSQRQFDAPVSTMDVALSIGPGLAKATIAGRVDGVRVDACDLIESDASLEIITAK 63

Query: 66  DP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  A++ ++P+ ++AIGP I++GFYYD D EQ  + ++L  IEK
Sbjct: 64  DEVDGLEIVRHSCAHLLGHAIKQLYPDAKMAIGPTIDNGFYYDIDLEQSLTQEDLEVIEK 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLC 183
           +M E+       +K+ +S ++AR+ F+++ E YK+EIL E++   +   LY   E+ D+C
Sbjct: 124 RMIELAKTKYQVVKKKVSWQEARDAFDARGETYKIEILDENVARDDRPGLYHHEEYIDMC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV   G  + F KL+ VAGAYWRG+S+  ML RIYGTA++ ++ L  +L  LEE+ K
Sbjct: 184 RGPHVPHMGFCQNF-KLLSVAGAYWRGNSDNKMLQRIYGTAFHDKKALKAHLTRLEEAAK 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRK+ +++DLFH+ ++  G++FWH  GW IF+ L  ++R K+ + DY+E+  P ++D+
Sbjct: 243 RDHRKIGKQLDLFHMQQEAPGMVFWHHNGWTIFRELEVFIREKLNEYDYQEVKGPLMMDR 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+
Sbjct: 303 VLWERSGHWDKYADAMFT------TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRM 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSGSLHG+MRVRGFTQDDAH+FCT+ Q+  E      ++   YK FGF+ 
Sbjct: 357 AEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTEAQVQQEVTSCIEMVYDTYKTFGFDN 416

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+VKLSTRPEKRVGSDA+WD AE+ +   L++++      I   +  GEGAFYGPK E+ 
Sbjct: 417 IVVKLSTRPEKRVGSDAMWDKAESDLITALESME------IPFEIQEGEGAFYGPKIEFT 470

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D + R WQCGT+Q+DF LP R  A YV   +E+  PVMIHRA+ GS+ERFIGI+IE++
Sbjct: 471 LHDCLDRAWQCGTVQLDFALPERLGATYVGEDNERHTPVMIHRAILGSLERFIGILIEDY 530

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P QA+V  IT +  EY QEI   LK   + +  D RNE I +KIREH++K+
Sbjct: 531 AGFFPTWLAPQQAVVMNITDAQSEYVQEIVEKLKKCGIRVNADLRNEKIGFKIREHTLKR 590

Query: 603 IPIIIICGDKEASERSIGIR 622
           +P +++CGDKE     + +R
Sbjct: 591 VPFMLVCGDKEVEAGVVAVR 610


>gi|301156314|emb|CBW15785.1| threonyl-tRNA synthetase [Haemophilus parainfluenzae T3T1]
          Length = 643

 Score =  632 bits (1629), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 292/619 (47%), Positives = 422/619 (68%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPE 65
           +T PDGS + F    +  +VA+ I   LAK  +A  +NG+  D  D + E  ++EIIT +
Sbjct: 4   ITLPDGSKREFDRPVSVLEVAQDIGAGLAKATIAGRVNGERRDACDIINEDANLEIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ ++P+V++AIGP IE+GFYYD D ++  + +++  IEK+
Sbjct: 64  DEDGLEIIRHSCAHLLGHAIKQLFPDVKMAIGPTIENGFYYDVDLDRSLTQEDIDAIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K  +S ++AR+ FE + E YK+ IL E+I       LY   E+ D+CR
Sbjct: 124 MLELAKTNYDVIKTPVSWQEARDTFEKRGEPYKMAILDENIERTATPALYHHEEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +  + FKLMKVAGAYWRGDS   ML RIYGTAW  +++L +YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCQHFKLMKVAGAYWRGDSKNKMLQRIYGTAWADKKQLAEYLTRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ + +DL+H+ E+  G++FWH  GW IF+ L +++R K+K+ DY+E+  P ++D+ 
Sbjct: 243 DHRKIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW +Y   MF  +  +      R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWQNYGDLMFTTQSEN------REYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+ +E      ++  IY  FGF+ I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQIESEVTSCIKMVYDIYSTFGFQNI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPEKR+G+D +WD      +         + + +   +  GEGAFYGPK E+ L
Sbjct: 417 QVKLSTRPEKRIGADDMWD------RAEAGLAAALAHNGLEYEIQEGEGAFYGPKIEFAL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D + R+WQCGTIQ+DF LP R NA YV   +++  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 RDCLDREWQCGTIQLDFALPGRLNASYVAEDNDRRTPVMIHRAILGSIERFIGIITEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+QA+V  IT S  +Y Q++   L    L ++ D RNE + +KIREH+++++
Sbjct: 531 GFFPAWLAPVQAVVMNITDSQADYVQKVVKQLSDAGLRVKADLRNEKVGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++CGDKE +E  + +R
Sbjct: 591 PYMLVCGDKEIAEGKVAVR 609


>gi|71275167|ref|ZP_00651454.1| Threonyl-tRNA synthetase, class IIa [Xylella fastidiosa Dixon]
 gi|170731158|ref|YP_001776591.1| threonyl-tRNA synthetase [Xylella fastidiosa M12]
 gi|238687955|sp|B0U5E3|SYT_XYLFM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|71163976|gb|EAO13691.1| Threonyl-tRNA synthetase, class IIa [Xylella fastidiosa Dixon]
 gi|167965951|gb|ACA12961.1| threonyl-tRNA synthetase [Xylella fastidiosa M12]
          Length = 635

 Score =  632 bits (1629), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 293/622 (47%), Positives = 419/622 (67%), Gaps = 17/622 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAING-KVCDLSDPVREGSI-EII 62
           I +T PDGS + F    +   VA +I   LAK  +A  I+G  + D SD +   +I  II
Sbjct: 2   ITITLPDGSRREFEGPVSVMQVAHAIGPGLAKATIAGQIDGGHLVDASDLIEHDAILRII 61

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TPED  +L +IRHSCAH++  AV+ ++PE ++ IGP+I DGFYYD   ++PF+ ++LA I
Sbjct: 62  TPEDQEALEIIRHSCAHLVGHAVKQLYPEAKMVIGPVIADGFYYDIYSKRPFTPEDLAAI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESI-PAKENVTLYRQGEWFD 181
           E++M E+IA+D   +K   +      LF+ + E YK+ ++E + P    + +Y   E+ D
Sbjct: 122 EQRMVELIAQDYDVVKHITARHDVVRLFKERGEDYKLRLIEDMGPEVTAMGIYHHQEYVD 181

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           +CRGPHV +T +  K F+L +++GAYWRGD+    L RIYGTAW  +++L  Y+  L+++
Sbjct: 182 MCRGPHVPNT-RFLKAFRLTRISGAYWRGDTKNEQLQRIYGTAWADKKQLEAYMQRLQDA 240

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVL 300
           EKRDHRK+ +  DLFH+ E+G G++FWH KGW I+QT+ +Y+RR  ++  Y E+  PQ+L
Sbjct: 241 EKRDHRKIGKAQDLFHLQEEGPGLVFWHPKGWVIWQTIENYIRRVYRNSGYGELRCPQIL 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D  LWQ+SGHWD+Y+ NMF       T  + RT+A+KPMNCPGHV VFN GL SYR+LP+
Sbjct: 301 DVSLWQKSGHWDNYKENMFF------TDSEKRTYAVKPMNCPGHVQVFNQGLHSYRDLPI 354

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R  EFG+ +RNEPSG+LHGL+RVRGFTQDD H+FCT+ Q+  E    H   + +Y DFGF
Sbjct: 355 RYGEFGACHRNEPSGALHGLLRVRGFTQDDGHIFCTEAQIEAEVTAFHRQALQVYADFGF 414

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           E I +K++ RP+KR+G    WD AE  ++  L   +   Q+      L GEGAFYGPK E
Sbjct: 415 ENIQIKIALRPDKRLGDSLSWDKAEAALRAALSACEVEWQE------LPGEGAFYGPKIE 468

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           Y LKDAIGR WQ GTIQVDF +P R  A YV+  S++ HPVM+HRA+ GS+ERFIGI+IE
Sbjct: 469 YHLKDAIGRTWQLGTIQVDFMMPGRLGAEYVDERSQRRHPVMLHRAIVGSMERFIGILIE 528

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           ++ G  P WL+P+Q ++  IT +  EYA+++   L +    +  D RNE I YKIREH++
Sbjct: 529 HYAGIWPTWLAPVQVVIANITDAQYEYAEQVHKALLNQGFRVNIDLRNEKIGYKIREHTL 588

Query: 601 KKIPIIIICGDKEASERSIGIR 622
           +++P +++ GD+E    ++ +R
Sbjct: 589 QRVPYLLVVGDREKENGTVAVR 610


>gi|22125796|ref|NP_669219.1| threonyl-tRNA synthetase [Yersinia pestis KIM 10]
 gi|45442011|ref|NP_993550.1| threonyl-tRNA synthetase [Yersinia pestis biovar Microtus str.
           91001]
 gi|51596666|ref|YP_070857.1| threonyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
 gi|108807773|ref|YP_651689.1| threonyl-tRNA synthetase [Yersinia pestis Antiqua]
 gi|108812050|ref|YP_647817.1| threonyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|145598020|ref|YP_001162096.1| threonyl-tRNA synthetase [Yersinia pestis Pestoides F]
 gi|149365658|ref|ZP_01887693.1| threonyl-tRNA synthetase [Yersinia pestis CA88-4125]
 gi|153950233|ref|YP_001400689.1| threonyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
 gi|162420291|ref|YP_001607032.1| threonyl-tRNA synthetase [Yersinia pestis Angola]
 gi|165927513|ref|ZP_02223345.1| threonyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165939479|ref|ZP_02228025.1| threonyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|166011794|ref|ZP_02232692.1| threonyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166210452|ref|ZP_02236487.1| threonyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167400748|ref|ZP_02306254.1| threonyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167424849|ref|ZP_02316602.1| threonyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|170024059|ref|YP_001720564.1| threonyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
 gi|186895722|ref|YP_001872834.1| threonyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
 gi|218929522|ref|YP_002347397.1| threonyl-tRNA synthetase [Yersinia pestis CO92]
 gi|229837960|ref|ZP_04458119.1| threonyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229895121|ref|ZP_04510297.1| threonyl-tRNA synthetase [Yersinia pestis Pestoides A]
 gi|229898521|ref|ZP_04513666.1| threonyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229902362|ref|ZP_04517482.1| threonyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|270490458|ref|ZP_06207532.1| threonine--tRNA ligase [Yersinia pestis KIM D27]
 gi|294503566|ref|YP_003567628.1| threonyl-tRNA synthetase [Yersinia pestis Z176003]
 gi|22654122|sp|Q8ZDW5|SYT_YERPE RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|73919846|sp|Q669Z0|SYT_YERPS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|122979581|sp|Q1C728|SYT_YERPA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|122980145|sp|Q1CIG3|SYT_YERPN RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|166225518|sp|A4TIL1|SYT_YERPP RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|166987327|sp|A7FHG1|SYT_YERP3 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|238687259|sp|A9R0A8|SYT_YERPG RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|238688418|sp|B1JJ17|SYT_YERPY RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|238691408|sp|B2K668|SYT_YERPB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|21958722|gb|AAM85470.1|AE013793_6 threonine tRNA synthetase [Yersinia pestis KIM 10]
 gi|45436874|gb|AAS62427.1| threonyl-tRNA synthetase [Yersinia pestis biovar Microtus str.
           91001]
 gi|51589948|emb|CAH21580.1| threonyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
 gi|108775698|gb|ABG18217.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Yersinia pestis
           Nepal516]
 gi|108779686|gb|ABG13744.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Yersinia pestis
           Antiqua]
 gi|115348133|emb|CAL21061.1| threonyl-tRNA synthetase [Yersinia pestis CO92]
 gi|145209716|gb|ABP39123.1| threonyl-tRNA synthetase [Yersinia pestis Pestoides F]
 gi|149292071|gb|EDM42145.1| threonyl-tRNA synthetase [Yersinia pestis CA88-4125]
 gi|152961728|gb|ABS49189.1| threonyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
 gi|162353106|gb|ABX87054.1| threonyl-tRNA synthetase [Yersinia pestis Angola]
 gi|165912528|gb|EDR31159.1| threonyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|165920568|gb|EDR37845.1| threonyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165989259|gb|EDR41560.1| threonyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166207632|gb|EDR52112.1| threonyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167049601|gb|EDR61009.1| threonyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167056036|gb|EDR65814.1| threonyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|169750593|gb|ACA68111.1| threonyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
 gi|186698748|gb|ACC89377.1| threonyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
 gi|229680697|gb|EEO76793.1| threonyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|229688069|gb|EEO80140.1| threonyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229694326|gb|EEO84373.1| threonyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229701883|gb|EEO89906.1| threonyl-tRNA synthetase [Yersinia pestis Pestoides A]
 gi|262361608|gb|ACY58329.1| threonyl-tRNA synthetase [Yersinia pestis D106004]
 gi|262365651|gb|ACY62208.1| threonyl-tRNA synthetase [Yersinia pestis D182038]
 gi|270338962|gb|EFA49739.1| threonine--tRNA ligase [Yersinia pestis KIM D27]
 gi|294354025|gb|ADE64366.1| threonyl-tRNA synthetase [Yersinia pestis Z176003]
 gi|320015090|gb|ADV98661.1| threonyl-tRNA synthetase [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 642

 Score =  631 bits (1628), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 290/619 (46%), Positives = 424/619 (68%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D SD +  +  + IIT +
Sbjct: 4   ITLPDGSQRHYDHAVSVLDVALDIGPGLAKACIAGRVNGELVDASDLIESDAQLAIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L ++RHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D E   + ++LA +EK+
Sbjct: 64  DAEGLEILRHSCAHLLGHAIKQLWPDTKMAIGPVIDNGFYYDVDIEHTLTQEDLALLEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+  +D   +K+ +S ++AR+ F ++ E YKV IL E+I   +   LY   E+ D+CR
Sbjct: 124 MHELADKDYDVIKKKVSWQEARDTFAARGEDYKVAILDENISRDDRPGLYHHEEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKL K +GAYWRGDS   ML RIYGTAW  +++L  YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLQKTSGAYWRGDSKNKMLQRIYGTAWGDKKQLNAYLQRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF+ L +++R K+K+  Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELETFVRMKLKEYQYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW++Y  +MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWENYAEHMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSG+LHGLMRVRGFTQDDAHVFCT+EQ+ +E      ++  +Y  FGFEKI
Sbjct: 357 EFGSCHRNEPSGALHGLMRVRGFTQDDAHVFCTEEQVRDEVNSCIKMVYDMYSTFGFEKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+GSD LW  AE+ +   L      +++ I      GEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEKRIGSDELWTRAEDDLAAAL------TENGIPFDYQPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF+LP R +A Y+  ++++  PVMIHRA+ GS+ERFIGI+ E + 
Sbjct: 471 HDCLDRAWQCGTVQLDFSLPGRLSASYIGENNDRQVPVMIHRAILGSMERFIGILTEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+Q +V  IT S  +Y Q++   L+   +  + D RNE I +KIREH+++++
Sbjct: 531 GFFPTWLAPVQVVVMNITDSQSDYVQQVTKKLQDAGIRAKADLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++CGDKE     I +R
Sbjct: 591 PYMLVCGDKEVESGKIAVR 609


>gi|21243325|ref|NP_642907.1| threonyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str.
           306]
 gi|25453288|sp|Q8PJE1|SYT_XANAC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|21108867|gb|AAM37443.1| threonyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str.
           306]
          Length = 634

 Score =  631 bits (1628), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 290/623 (46%), Positives = 419/623 (67%), Gaps = 20/623 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I +T PDGS + F    +   VA+SI   LAK  +A  ++G++ D SD +  + S+ IIT
Sbjct: 2   INITLPDGSRREFESPVSVMQVAQSIGAGLAKATIAGQVDGQLVDASDVIDHDASLRIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   + +IRHSCAH++  AV+ ++PEV++ IGP+I +GFYYD   E+PF+ +++A IE
Sbjct: 62  AKDAEGVEIIRHSCAHLVGHAVKQLYPEVKMVIGPVIAEGFYYDIYSERPFTPEDMAAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVT---LYRQGEWF 180
           ++MQE+IA+D   +K+     +  E+F  + E YK+ ++E +   E++T   LY   E+ 
Sbjct: 122 QRMQELIAQDYDVIKKVTPRAEVIEVFAQRGEEYKLRLIEDM--SEDITAMGLYYHQEYV 179

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           D+CRGPHV +T +  K FKL +++GAYWRGD+    L RIYGTAW  +++L  Y+  +EE
Sbjct: 180 DMCRGPHVPNT-RFLKAFKLTRISGAYWRGDAKNEQLQRIYGTAWADKKQLDAYILRMEE 238

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQV 299
           ++KRDHR++ +  DLFH+ E+  G++FWH KGW ++Q +  YMR+  +D  Y E+  PQ+
Sbjct: 239 ADKRDHRRIGKAQDLFHLQEEAPGLVFWHPKGWSLWQVVEQYMRKVYRDSGYGEVRCPQI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           LD  LWQ+SGHWD+Y+  MF       T  + RT+A+KPMNCPGHV VFN GL SYR+LP
Sbjct: 299 LDVSLWQKSGHWDNYQDAMFF------TESEKRTYAVKPMNCPGHVQVFNQGLHSYRDLP 352

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R  EFG+ +RNEPSG+LHG++RVRGFTQDD HVFC + Q+ +E    H   +++Y  FG
Sbjct: 353 IRYGEFGACHRNEPSGALHGILRVRGFTQDDGHVFCLEPQIESEVTAFHQQALAVYTAFG 412

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F+ I +K++ RPEKR+G DA WD AE  ++  L       Q+      L GEGAFYGPK 
Sbjct: 413 FDDIQIKIALRPEKRLGDDATWDKAEAALRSALGVCGVEWQE------LPGEGAFYGPKI 466

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           EY LKDAIGR WQ GT+QVDF +P R  A YV+ +S+K HPVM+HRA+ GS+ERFIGI+I
Sbjct: 467 EYHLKDAIGRTWQLGTMQVDFMMPGRLGAEYVDENSQKKHPVMLHRAIVGSMERFIGILI 526

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E+  G  P WL+P+Q +V  IT +  EY   +   L +    +  D RNE I YKIREH+
Sbjct: 527 EHHAGAFPSWLAPVQVVVANITDAQAEYVDSVRKTLANQGFRVSADLRNEKIGYKIREHT 586

Query: 600 IKKIPIIIICGDKEASERSIGIR 622
           ++++P +++ GD+E    ++ +R
Sbjct: 587 LQRVPYLLVVGDREKENGAVAVR 609


>gi|315634189|ref|ZP_07889478.1| threonine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
 gi|315477439|gb|EFU68182.1| threonine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
          Length = 643

 Score =  631 bits (1628), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 298/641 (46%), Positives = 431/641 (67%), Gaps = 16/641 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPE 65
           +T PDGS + F    T  +VA++I   LAK  +A  +NG+  D  D + E S +EIIT +
Sbjct: 4   ITLPDGSQRQFDKPVTVLEVAQNIGAGLAKATIAGRVNGERKDACDLITEDSTLEIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHS AH++  A++ ++P+V++AIGP I++GFYYD D ++  + +++  +EK+
Sbjct: 64  DEDGLEIIRHSTAHLLGHAIKQLFPDVKMAIGPTIDNGFYYDVDLDRSLTQEDIDALEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K  +S ++AR+ FE + E YK+ IL E+I       LY   E+ D+CR
Sbjct: 124 MLELAKTNYDVIKTPVSWQEARDTFEKRGEPYKMAILDENIERTATPALYHHQEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKL K+AGAYWRGDS   ML RIYGTAW  +++L  YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLQKIAGAYWRGDSKNKMLQRIYGTAWADKKQLDAYLQRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ + +DL+H+ E+  G++FWH  GW IF+ L +++R K+K  DY+E+  P ++D+ 
Sbjct: 243 DHRKIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW +Y   MF  +  +      R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWQNYGDLMFTTQSEN------REYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+ +E      ++  IY  FGF  I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQIESEVTSCIRMVYDIYSTFGFTNI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPEKR+G+D +WD AE   +G+ + +K++    +   +  GEGAFYGPK E+ L
Sbjct: 417 FVKLSTRPEKRIGADEMWDRAE---EGLANALKHNG---LEYEIQEGEGAFYGPKIEFAL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D + R+WQCGTIQ+DF LP R NA YV   +++  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 RDCLDREWQCGTIQLDFALPGRLNASYVAEDNDRRTPVMIHRAILGSIERFIGIITEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P QA+V  IT S  EY Q++A  L    L ++TD RNE + +KIREH+++++
Sbjct: 531 GFFPAWLAPTQAVVMNITDSQSEYVQQVAKQLSDAGLRVKTDLRNEKVGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P +++CGDKE     + +R          ++ + + IL K+
Sbjct: 591 PYMLVCGDKEIEAGKVAVRTRKGQDLGTFTVEEFLEILKKQ 631


>gi|90407011|ref|ZP_01215201.1| threonyl-tRNA synthetase [Psychromonas sp. CNPT3]
 gi|90311882|gb|EAS39977.1| threonyl-tRNA synthetase [Psychromonas sp. CNPT3]
          Length = 635

 Score =  631 bits (1628), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 294/640 (45%), Positives = 423/640 (66%), Gaps = 15/640 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDG+ + +    +  ++A  I   LAK  +A  +NG + D  D +  +  I IIT +
Sbjct: 4   ITLPDGNQRQYDNSTSILEIAADIGPGLAKACIAGRVNGTLVDACDVITTDADIAIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L ++RHSCAH++  A++ ++P  ++AIGP I++GFYYD D +   + +ELA+IEK+
Sbjct: 64  DDEGLEILRHSCAHLLGHAIKQLYPNAKMAIGPTIDNGFYYDIDVDVAINDEELAKIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M  ++  +   +K+ +S  +A  LF+ + E YK+EILE I   +   LY   E+ D+CRG
Sbjct: 124 MNLLVKTNYKVVKKNVSVAEAIALFKERDEPYKLEILEGIDKDDRPGLYHHEEYIDMCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV    +  ++FKLMKVAGAYWRG+S+  ML RIYGTAW  +++L  YL  LEE+ KRD
Sbjct: 184 PHV-PMMKFSQYFKLMKVAGAYWRGNSDNKMLQRIYGTAWADKKQLKAYLKRLEEAAKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHL 304
           HRK+ +++DL+H+ ++  G++FWH  GW I++ L  Y+R + ++  Y+E+  PQ+LD+ L
Sbjct: 243 HRKIGKQLDLYHMQDEAPGMVFWHANGWTIYRELEKYIREQTEEYGYQEVKAPQILDRSL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHW  Y+ NMF   C+++     R +A+KPMNCPGHV +FN GLKSYR+LP+R++E
Sbjct: 303 WEKSGHWAKYKDNMFCT-CSEN-----RDYAIKPMNCPGHVQIFNQGLKSYRDLPLRMSE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNEPSGSLHGLMRVR FTQDDAH+FCT+ Q+ +E      ++   YK FGFE I 
Sbjct: 357 FGSCHRNEPSGSLHGLMRVRAFTQDDAHIFCTEAQILDEVSSCIKMVFECYKTFGFENID 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           VKLSTRPE+RVG DA WD AE  +   L      +++ +    L GEGAFYGPK E+ L 
Sbjct: 417 VKLSTRPEQRVGDDATWDKAEAALADAL------TKNDVEFSWLPGEGAFYGPKIEFTLH 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D +GR WQCGTIQ+DF++P R +A +V   +E+  PVMIHRA+ GS+ER+IGI+ E + G
Sbjct: 471 DCLGRAWQCGTIQLDFSMPGRLDATFVGEDNERHTPVMIHRAILGSLERWIGILTEEYAG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P WLSP Q +V  IT    EY  E+   LK   + + +D RNE I +KIREH++K++P
Sbjct: 531 IFPTWLSPQQVVVMNITDKQSEYVAEVVTKLKKSGIRVISDLRNEKIGFKIREHTLKRVP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            +++ GDKE   R + IR        K  + D I  + +E
Sbjct: 591 YLLVVGDKEVEARELSIRTRKGDDLGKFKIDDFITYIKEE 630


>gi|315181382|gb|ADT88295.1| threonyl-tRNA synthetase [Vibrio furnissii NCTC 11218]
          Length = 642

 Score =  631 bits (1628), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 300/642 (46%), Positives = 430/642 (66%), Gaps = 17/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  +VA+SI   LAK  +A  ++G   D  D +  + S+EIIT +
Sbjct: 4   ITLPDGSQRQFDNPVSTLEVAQSIGPGLAKATIAGRVDGVRVDACDLIENDASLEIITAK 63

Query: 66  DP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  A++ ++P+ ++AIGP I++GFYYD D E+  S D++ +IE 
Sbjct: 64  DEVDGLEIVRHSCAHLLGHALKQLYPQAKMAIGPTIDNGFYYDIDLEESLSQDDIEKIEA 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWFDLC 183
           +M+E+       +K+ +S ++AR+ FE+++E YK+EIL+   A+++   LY   E+ D+C
Sbjct: 124 RMKELAKTKYQVVKKKVSWQEARDTFEARQEPYKMEILDQNVARDDRPGLYHHEEYIDMC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV   G   + FKL+ VAGAYWRGDSN  ML RIYGTA++ ++ L  +L  LEE+ K
Sbjct: 184 RGPHVPHMG-FCQHFKLLNVAGAYWRGDSNNKMLQRIYGTAFHDKKALQAHLTRLEEAAK 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRK+ +++DLFH+ ++  G++FWH  GW IF+ L  ++R K+ +  Y+E+  P ++D+
Sbjct: 243 RDHRKIGKQLDLFHMQQEAPGMVFWHHNGWSIFRDLEVFIRHKLNEYGYQEVKGPLMMDR 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+
Sbjct: 303 VLWERSGHWDKYADAMFT------TSSENRDYAIKPMNCPGHVQIFNQGLKSYRDLPLRM 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSGSLHG+MRVRGFTQDDAH+FCT++Q+  E      ++   Y  FGF+ 
Sbjct: 357 AEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTEDQIQEEVTSCIKMVYDTYTTFGFDN 416

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I VKLSTRPEKRVGSD +WD +E  +K  L+ +       I   +  GEGAFYGPK E+ 
Sbjct: 417 IAVKLSTRPEKRVGSDEIWDKSEEALKHSLEAMG------IAYEIQEGEGAFYGPKIEFT 470

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D + R WQCGT+Q+DFNLP+R  A YV  ++E+  PVMIHRA+ GS+ERFIGI+IE +
Sbjct: 471 LYDCLDRAWQCGTVQLDFNLPTRLGATYVGENNERLVPVMIHRAILGSLERFIGILIEEY 530

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P QA+V  IT    +YAQE+A  L+   +  + D RNE I +KIREH++K+
Sbjct: 531 AGFFPTWLAPEQAVVVNITDKQADYAQEVAQKLQKCGIRAKADLRNEKIGFKIREHTLKR 590

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P +++CGD+E     I +R        K  L D +  +  E
Sbjct: 591 VPYMLVCGDQEMEAGEIAVRTRKGKDLGKFKLDDFVSHIQTE 632


>gi|253688275|ref|YP_003017465.1| threonyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|259516611|sp|C6DFY6|SYT_PECCP RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|251754853|gb|ACT12929.1| threonyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 642

 Score =  631 bits (1627), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 290/640 (45%), Positives = 430/640 (67%), Gaps = 19/640 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D SD +  +  + IIT +
Sbjct: 4   ITLPDGSQRHYDHAVSPLDVALDIGPGLAKACIAGRVNGELVDASDKIDTDAQLAIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D ++  + +++  +EK+
Sbjct: 64  DEAGLEIIRHSCAHLLGHAIKQLWPDTKMAIGPVIDNGFYYDVDIDRTLTQEDIELLEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   D   +K+ +S ++AR+ F ++ E YK+ IL E+I   +   LY   E+ D+CR
Sbjct: 124 MHELADTDYDVIKKKVSWQEARDAFAARGETYKMAILDENISRDDRPGLYHHEEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKL K +GAYWRGDS   ML RIYGTAW  +++L  YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLQKTSGAYWRGDSKNKMLQRIYGTAWADKKQLASYLQRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF+ L +++R K+K   Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEAFVRMKLKSYQYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           +W+++GHW++Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 MWEKTGHWENYKEAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  FGFEKI
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQVRDEVNSCIKMVYDMYSTFGFEKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+GSD +WD AE  +   L      +++ I      GEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEKRIGSDEMWDRAEADLAAAL------TENNIEFDYQPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF+LP R NA YV   +E+  PVMIHRA+ GS+ERFIGI+ E F 
Sbjct: 471 HDCLDRAWQCGTVQLDFSLPGRLNASYVGESNERQVPVMIHRAILGSMERFIGILTEEFA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+Q ++  IT +  +Y  E+   L+   + ++ D RNE I +KIREH+++++
Sbjct: 531 GFFPTWLAPVQVVIMNITDTQSDYVNELTRKLQEAGIRVKADLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           P +++CGDKE     + +R   +   + +  LD   +++K
Sbjct: 591 PYMLVCGDKEVEAGKVAVR---TRRGKDLGSLDVSEVISK 627


>gi|50121350|ref|YP_050517.1| threonyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
 gi|73919790|sp|Q6D4G8|SYT_ERWCT RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|49611876|emb|CAG75325.1| threonyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
          Length = 642

 Score =  631 bits (1627), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 290/640 (45%), Positives = 430/640 (67%), Gaps = 19/640 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS +++    +  DVA  I   LAK  +A  ++G++ D SD +  +  + IIT +
Sbjct: 4   ITLPDGSQRHYDHAVSPLDVALDIGPGLAKACIAGRVDGELIDASDKIDTDAQLAIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D ++  + +++  +EK+
Sbjct: 64  DDAGLEIIRHSCAHLLGHAIKQLWPDTKMAIGPVIDNGFYYDVDIDRTLTQEDIELLEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   D   +K+ +S ++AR+ F ++ E YK+ IL E+I   +   LY   E+ D+CR
Sbjct: 124 MHELADTDYDVIKKKVSWQEARDAFAARGETYKIAILDENISHDDRPGLYHHEEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKL K +GAYWRGDS   ML RIYGTAW  +++L  YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLQKTSGAYWRGDSKNKMLQRIYGTAWADKKQLASYLQRLEEASKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF+ L +++R K+K   Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEAFVRMKLKSYQYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           +W+++GHWD+Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 MWEKTGHWDNYKEAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  FGFEKI
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQVRDEVNSCIKMVYDMYSTFGFEKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+GSD +WD AE  +   L      +++ I      GEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEKRIGSDEMWDRAEADLAAAL------TENNIEFAYQPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF+LP R +A YV   +E+  PVMIHRA+ GS+ERFIGI+ E F 
Sbjct: 471 HDCLDRAWQCGTVQLDFSLPGRLSASYVGESNERQVPVMIHRAILGSMERFIGILTEEFA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+Q ++  IT S  +Y  E+   L+   + ++ D RNE I +KIREH+++++
Sbjct: 531 GFFPTWLAPVQVVIINITDSQSDYVNELTQKLQEAGIRVKADLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           P +++CGDKE     + +R   +   + +  LD   +++K
Sbjct: 591 PYMLVCGDKEVEAGKVAVR---TRRGKDLGSLDVSEVISK 627


>gi|251789558|ref|YP_003004279.1| threonyl-tRNA synthetase [Dickeya zeae Ech1591]
 gi|247538179|gb|ACT06800.1| threonyl-tRNA synthetase [Dickeya zeae Ech1591]
          Length = 642

 Score =  631 bits (1627), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 290/641 (45%), Positives = 434/641 (67%), Gaps = 16/641 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDG+ +++    +  DVA  I   LAK  +A  +NG++ D  D +  +  + IIT +
Sbjct: 4   ITLPDGNQRHYDHAVSPLDVALDIGPGLAKACIAGRVNGELVDAVDVIESDAQLSIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   + +IRHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D ++  + ++L  +EK+
Sbjct: 64  DEEGMEIIRHSCAHLLGHAIKQLWPDTKMAIGPVIDNGFYYDVDLDRTLTQEDLELLEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+ ++D   +K+ +S ++AR+ F ++ E+YKV IL E+I   +   LY   E+ D+CR
Sbjct: 124 MHELASKDYDVVKKKVSWQEARDTFTARGESYKVAILDENISRDDRPGLYHHEEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKL K +GAYWRGDS   ML RIYGTAW  +++L+ YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLQKTSGAYWRGDSKNKMLQRIYGTAWADKKQLSAYLQRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF+ L +++R K+K+  Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEAFVRMKLKEYQYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW++Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWENYKEAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+ +E      ++  +Y  FGFEKI
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQVRDEVNNCIKMVYDMYSTFGFEKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+GSD  WD AE  +   L      +++ +      GEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEKRIGSDETWDRAEEDLAAAL------TENGLPFEYQPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF+LP R +A YV  ++E+  PVMIHRA+ GS+ERFIGI+ E F 
Sbjct: 471 HDCLDRAWQCGTVQLDFSLPGRLSASYVGENNERQVPVMIHRAILGSMERFIGILTEEFA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+QA+V  IT S  +Y  E+   L+   + ++ D RNE I +KIREH+++++
Sbjct: 531 GFFPTWLAPVQAVVMNITDSQSDYVSELTRKLQDAGIRVKADLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P +++CGDKE     + +R         +++ + I  L +E
Sbjct: 591 PYMLVCGDKEVEAGKVAVRTRRGKDLGSMNVSEVITKLQEE 631


>gi|312881548|ref|ZP_07741334.1| threonyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309370825|gb|EFP98291.1| threonyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 642

 Score =  631 bits (1627), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 298/642 (46%), Positives = 428/642 (66%), Gaps = 17/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS + F    +  DVA+SI   LAK  +A  ++G+  D  D + ++ S+EIIT +
Sbjct: 4   ITLPDGSQRQFDNPVSTLDVAQSIGPGLAKATIAGRVDGQRVDACDLIEQDASLEIITVK 63

Query: 66  DP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  A++ ++PE ++AIGP I+ GFYYD D EQ  + ++L +IEK
Sbjct: 64  DEVDGLEIVRHSCAHLLGHAIKQLYPEAKMAIGPTIDSGFYYDIDLEQSLTQEDLEKIEK 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLC 183
           +M+E+       +K+ +S ++AR+ FE ++E YK+EIL E++   +   LY   E+ D+C
Sbjct: 124 RMKELAKTKYAVVKKKVSWQEARDAFEGRRETYKMEILDENVSRDDRPGLYHHEEYIDMC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV   G   + F L+ +AGAYWRG+S+  ML RIYGTA++ ++ L  +L  LEE+ K
Sbjct: 184 RGPHVPHMG-FCQHFTLLSIAGAYWRGNSDNKMLQRIYGTAFHDKKALKAHLTRLEEAAK 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRK+ +++DLFH+ ++  G++FWH  GW IF+ L  ++R K+ + DY+E+  P ++D+
Sbjct: 243 RDHRKIGKQLDLFHMQQEAPGMVFWHHNGWSIFRDLEVFVREKLTEYDYQEVKGPLIMDR 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y   MF       T  + R +ALKPMNCPGHV +FN GLKSYR+LP+R+
Sbjct: 303 VLWERSGHWDKYADAMFT------TASENRDYALKPMNCPGHVQIFNQGLKSYRDLPLRM 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHG+MRVRGFTQDDAH+FCT+ Q+  E      ++   Y+ FGF  
Sbjct: 357 AEFGSCHRNEPSGALHGIMRVRGFTQDDAHIFCTESQIQEEVTSCIKMVYDTYETFGFSN 416

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I VKLSTRPEKRVGSD +WD++E  +K  L+ +       I   +  GEGAFYGPK E+ 
Sbjct: 417 IAVKLSTRPEKRVGSDEIWDESEQALKQSLEAMD------IPYEIQEGEGAFYGPKIEFT 470

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D + R WQCGT+Q+DFNLP R  A YV+ ++E+  PVMIHRA+ GS+ERFIGI+IE +
Sbjct: 471 LHDCLDRAWQCGTVQLDFNLPGRLGATYVDENNERQVPVMIHRAILGSLERFIGILIEEY 530

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WLSP QAI+  IT    +Y  E+A  L+   +  + D RNE I +KIREH++K+
Sbjct: 531 YGFFPTWLSPEQAIIMNITDKQSDYVHEVAQKLQKCGIRAKADLRNEKIGFKIREHTLKR 590

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P +++CGD+E     I +R        K  + D +  +  E
Sbjct: 591 VPYMLVCGDQEMEAGEIAVRTRKGKDLGKFKVDDFVSYIQDE 632


>gi|190575251|ref|YP_001973096.1| threonyl-tRNA synthetase [Stenotrophomonas maltophilia K279a]
 gi|229558456|sp|B2FN79|SYT_STRMK RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|190013173|emb|CAQ46806.1| putative threonyl-tRNA synthetase [Stenotrophomonas maltophilia
           K279a]
          Length = 633

 Score =  631 bits (1627), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 290/644 (45%), Positives = 427/644 (66%), Gaps = 16/644 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I +T PDGS + F    +  +VA+SI   LAK  +A A++G + D SD +  + S+ IIT
Sbjct: 2   INITLPDGSRREFENPVSVMEVAQSIGAGLAKATIAGAVDGVLVDASDVIDHDASLRIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   + +IRHSCAH++  AV+ ++P+V++ IGP+I +GFYYD   E+PF+ D++A IE
Sbjct: 62  AKDEEGVEIIRHSCAHLVGHAVKQLYPDVKMVIGPVIAEGFYYDIYSERPFTPDDMAAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-ENVTLYRQGEWFDL 182
           K+M E+IA+D   +K+     +  E+F+++ E YK+ ++E +    + + +Y   E+ D+
Sbjct: 122 KRMGELIAQDYDVIKKMTPRAEVIEIFKARGEDYKLRLIEDMSEDIQAMGMYYHQEYVDM 181

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +T +  K FKL +++GAYWRGD+    L RIYGTAW  +++L  Y+  +EE+E
Sbjct: 182 CRGPHVPNT-RFLKAFKLTRISGAYWRGDAQNEQLQRIYGTAWADKKQLEAYIKRIEEAE 240

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLD 301
            RDHR++ ++ DLFH+ E+  G++FWH KGW ++Q +  YMR+  ++  Y E+  PQ+LD
Sbjct: 241 MRDHRRIGKQQDLFHLQEEAPGLVFWHPKGWALWQVVEQYMRKVYRNSGYGEVRCPQILD 300

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             LW++SGHWD+Y+ NMF       T  + RT+A+KPMNCPGH+ VFN GL SYR+LP+R
Sbjct: 301 VSLWKKSGHWDNYQDNMFF------TESEKRTYAVKPMNCPGHIQVFNQGLHSYRDLPIR 354

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
             EFGS +RNEPSG+LHG++RVRGFTQDD HVFCT+ Q+ +E    H   +++Y+ FGF+
Sbjct: 355 YGEFGSCHRNEPSGALHGILRVRGFTQDDGHVFCTENQIESEVTAFHQQALAVYQHFGFD 414

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
           +I +K++ RPE R+G DA WD AE  ++  L       Q+      L GEGAFYGPK EY
Sbjct: 415 EIQIKIALRPESRLGDDATWDKAEGALRSALTACGVEWQE------LPGEGAFYGPKIEY 468

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            LKDAIGR WQ GT+QVDF +P R  A YV+ +S+K HPVM+HRA+ GS+ERF+GI+IE+
Sbjct: 469 HLKDAIGRTWQLGTMQVDFMMPGRLGAEYVDENSQKKHPVMLHRAIVGSMERFLGILIEH 528

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G  P WL+P Q +V  IT +  +Y   +   L      + +D RNE I YKIREH+++
Sbjct: 529 HAGQFPAWLAPTQVVVANITDAQADYVSGVTKTLAEQGFRVSSDLRNEKIGYKIREHTLQ 588

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           ++P +++ GD+E    ++ +R         +SL   I  L  E 
Sbjct: 589 RVPYLLVIGDREKENGAVAVRTRSGEDLGSMSLQAFIERLHAEG 632


>gi|28199783|ref|NP_780097.1| threonyl-tRNA synthetase [Xylella fastidiosa Temecula1]
 gi|182682533|ref|YP_001830693.1| threonyl-tRNA synthetase [Xylella fastidiosa M23]
 gi|32130161|sp|Q87AB2|SYT_XYLFT RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|238691115|sp|B2I9P8|SYT_XYLF2 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|28057904|gb|AAO29746.1| threonyl-tRNA synthetase [Xylella fastidiosa Temecula1]
 gi|182632643|gb|ACB93419.1| threonyl-tRNA synthetase [Xylella fastidiosa M23]
 gi|307578811|gb|ADN62780.1| threonyl-tRNA synthetase [Xylella fastidiosa subsp. fastidiosa
           GB514]
          Length = 635

 Score =  630 bits (1626), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 292/622 (46%), Positives = 420/622 (67%), Gaps = 17/622 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAING-KVCDLSDPVREGSI-EII 62
           I +T PDGS + F    +   VA +I   LAK  +A  I+G  + D SD +   +I  II
Sbjct: 2   ITITLPDGSRREFEGPVSVMQVAHAIGPGLAKATIAGQIDGGHLVDASDLIEHDAILRII 61

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TPED  +L +IRHSCAH++  AV+ ++PE ++ IGP+I DGFYYD   ++PF+ ++LA I
Sbjct: 62  TPEDQEALEIIRHSCAHLVGHAVKQLYPEAKMVIGPVIADGFYYDIYSKRPFTPEDLAAI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESI-PAKENVTLYRQGEWFD 181
           E++M E+IA+D   +K   +      LF+ + E YK+ ++E + P    + +Y   E+ D
Sbjct: 122 EQRMVELIAQDYDVVKHITARHDVVRLFKERGEDYKLRLIEDMGPEVTAMGIYHHQEYVD 181

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           +CRGPHV +T +  K F+L +++GAYWRG++    L RIYGTAW  +++L  Y+  L+++
Sbjct: 182 MCRGPHVPNT-RFLKAFRLTRISGAYWRGNTKNEQLQRIYGTAWADKKQLEAYMQRLQDA 240

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVL 300
           EKRDHRK+ +  DLFH+ E+G G++FWH KGW I+QT+ +Y+RR  ++  Y E+  PQ+L
Sbjct: 241 EKRDHRKIGKAQDLFHLQEEGPGLVFWHPKGWVIWQTIENYIRRVYRNSGYGELRCPQIL 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D  LWQ+SGHWD+Y+ NMF       T  + RT+A+KPMNCPGHV VFN GL SYR+LP+
Sbjct: 301 DVSLWQKSGHWDNYKENMFF------TDSEKRTYAVKPMNCPGHVQVFNQGLHSYRDLPI 354

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R  EFG+ +RNEPSG+LHGL+RVRGFTQDD H+FCT+ Q+  E    H   + +Y DFGF
Sbjct: 355 RYGEFGACHRNEPSGALHGLLRVRGFTQDDGHIFCTEAQIEAEVTAFHRQALQVYADFGF 414

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           E I +K++ RP+KR+G    WD AE  ++  L   +   Q+      L GEGAFYGPK E
Sbjct: 415 ENIQIKIALRPDKRLGDSLSWDKAEAALRAALSACEVEWQE------LPGEGAFYGPKIE 468

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           Y LKDAIGR WQ GTIQVDF +P+R  A YV+  S++ HPVM+HRA+ GS+ERFIGI+IE
Sbjct: 469 YHLKDAIGRTWQLGTIQVDFMMPARLGAEYVDERSQRRHPVMLHRAIVGSMERFIGILIE 528

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           ++ G  P WL+P+Q ++  IT +  EYA+++   L +    +  D RNE I YKIREH++
Sbjct: 529 HYAGIWPTWLAPVQVVIANITDAQYEYAEQVHKALLNQGFRVNIDLRNEKIGYKIREHTL 588

Query: 601 KKIPIIIICGDKEASERSIGIR 622
           +++P +++ GD+E    ++ +R
Sbjct: 589 QRVPYLLVVGDREKENGTVAVR 610


>gi|332141016|ref|YP_004426754.1| threonyl-tRNA synthetase [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|238693239|sp|B4RSL8|SYT_ALTMD RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|327551038|gb|AEA97756.1| threonyl-tRNA synthetase [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 638

 Score =  630 bits (1626), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 298/641 (46%), Positives = 421/641 (65%), Gaps = 16/641 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS + F    +  DVA  I   LAK  +A  +NG++ D  D +  +  ++IIT +
Sbjct: 4   ITLPDGSQRAFDNPVSVLDVANDIGPGLAKATIAGKVNGELVDAVDMIDADAQLQIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L ++RHSCAH++  A++ +WP  ++AIGP+I++GFYYD D E+  + ++LA++EK+
Sbjct: 64  DEEGLEILRHSCAHLLGHAIKQLWPNTKMAIGPVIDNGFYYDVDMEESLTQEDLAKLEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K  +S ++AR+ FE++ E+YK+EIL E+I   +   LY+  E+ D+CR
Sbjct: 124 MLELAKTNYNVVKNKVSWQEARDAFEARGESYKMEILDENISKDDRPALYQHEEYTDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKLMKVAGAYWRGDS+  ML RIYGTAW  +++L  YL  LEE+EKR
Sbjct: 184 GPHVPNM-KFCHHFKLMKVAGAYWRGDSDNKMLQRIYGTAWADKKQLKSYLQRLEEAEKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ + ++LFH  E+  G++FWH  GW I+  L S++R+K+++  Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKALNLFHWQEEAPGMVFWHNDGWSIYTELESFVRKKLREYGYDEVKGPLMMDRS 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SGHWD Y  NMF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKSGHWDKYAENMFT------TESEKREYAVKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFG  +RNEPSG+LHGLMRVRGFTQDDAH+FCT+EQ+  E      ++   Y  FGFE I
Sbjct: 357 EFGCCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQILEEVSGCIKMVYETYAAFGFENI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPEKRVG+D +WD      K      +    + I      GEGAFYGPK E+ L
Sbjct: 417 KVKLSTRPEKRVGADEIWD------KSEAALAEALKANDIEFDYQPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF++P R  + YV    E+  PVMIHRA+ GS+ERFIGI+ E F 
Sbjct: 471 HDCLDRAWQCGTVQLDFSMPGRLGSTYVAEDGERKVPVMIHRAILGSLERFIGILTEEFA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  PLWL+P Q +V  IT    +YA +    L+      ++D RNE I +KIREH++K+I
Sbjct: 531 GFFPLWLAPQQVVVMNITDKQADYASDCVKKLQDLGFRAKSDLRNEKIGFKIREHTLKRI 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P +++ GDKE     + +R        K+ L D I +  +E
Sbjct: 591 PYMLVVGDKEMEAGEVAVRSRRGDDLGKMGLEDFIAMAQQE 631


>gi|332184284|gb|AEE26538.1| Threonyl-tRNA synthetase [Francisella cf. novicida 3523]
          Length = 634

 Score =  630 bits (1626), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 303/642 (47%), Positives = 429/642 (66%), Gaps = 16/642 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           I + FPDGSI+ F       D+A+SIS SLAK  VAV I+G++ D  D +  +  + +IT
Sbjct: 2   INIKFPDGSIREFESGVNSLDIAKSISPSLAKVTVAVYIDGQLKDAKDTINSDCELRLIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +DP  L ++RHSCAH++A AV+ ++P  +V IGP++++GFYYDF  ++     +LA IE
Sbjct: 62  LKDPEGLEILRHSCAHLLAHAVKELYPNTEVTIGPVVDNGFYYDFSFKEAIGEADLAAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           KKM+E+  + +P   + +   +A E F+++ E YKVEI++SI A E V +Y Q  + DLC
Sbjct: 122 KKMKELAKKSTPVSYRVVPKAEAIEFFKAQGENYKVEIIDSI-ADEQVKIYTQDNFSDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ +T  V K FKL K+AGAYWRG+SN  ML+RIYGT W T+++L QYL  LEE+EK
Sbjct: 181 RGPHIPNTS-VLKAFKLTKLAGAYWRGNSNNEMLTRIYGTCWATKEDLDQYLNMLEEAEK 239

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQ 302
           RDHRK+ + +DLFH  ED  G+ FWH  G +I++ +  YMR    K    EI TP + D 
Sbjct: 240 RDHRKIGKVLDLFHFQEDSPGIAFWHDNGVRIWRQVEDYMRASNNKYGCSEIRTPLIADF 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGH   Y  NMFA K  +      R FA++PMNCP  V V+N  L SYR+LP+R+
Sbjct: 300 SLWEKSGHASKYAENMFATKSEN------RDFAIRPMNCPTCVQVYNTKLHSYRDLPIRM 353

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFG V+RNEPSGSLHGL+RVR FTQDD H+FCT EQ+  E + +      +YKDFGF  
Sbjct: 354 AEFGIVHRNEPSGSLHGLLRVRSFTQDDGHIFCTPEQVEEEVILMVQQCFEVYKDFGFND 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             VK++ RPE R+G D  WD +E ++K  LD       + ++  +L GEGAFYGPK E+ 
Sbjct: 414 FAVKIALRPENRIGDDETWDKSEQMLKNALDA------NNVSYELLPGEGAFYGPKIEFH 467

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LKDAIGR WQCGTIQ+DF++P R  A Y++ + +K  PVM+HRA+ GS+ERFIG++IE++
Sbjct: 468 LKDAIGRSWQCGTIQLDFSMPQRLGATYIDKNGDKQVPVMLHRAIVGSLERFIGMLIEHY 527

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            GNLPLWL+P Q  V  I+++  +Y +E+  +L+ + +  + D RNE I +KIREH++ +
Sbjct: 528 AGNLPLWLAPFQVAVMGISNNQDDYCKEVFTMLEKNGIRTKLDLRNEKIGFKIREHTLLR 587

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P ++I G  E  ++ I IR+       ++S+ D    L K+
Sbjct: 588 VPYLVILGKNEQEQKIITIRKHSGEDLGQMSVDDFCAFLDKQ 629


>gi|197284912|ref|YP_002150784.1| threonyl-tRNA synthetase [Proteus mirabilis HI4320]
 gi|227355315|ref|ZP_03839716.1| threonyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
 gi|238693141|sp|B4ETK6|SYT_PROMH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|194682399|emb|CAR42252.1| threonyl-tRNA synthetase [Proteus mirabilis HI4320]
 gi|227164539|gb|EEI49410.1| threonyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
          Length = 642

 Score =  630 bits (1626), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 293/619 (47%), Positives = 418/619 (67%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPE 65
           +T PDGS + F    +  DVA  I   LAK  +A  +NG++ D  + + + S + IIT +
Sbjct: 4   ITLPDGSQRQFENAVSVMDVAADIGPGLAKACIAGRVNGELVDACELIEQDSQLAIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ +WP+ ++AIGP+IE+GFYYD D +   + ++L  +EK+
Sbjct: 64  DDEGLEIIRHSCAHLLGHAIKQLWPQTKMAIGPVIENGFYYDVDLDHSLTQEDLETLEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   D   +K+ ++  +ARE F ++ E YKV IL E+I    +  LY   E+ D+CR
Sbjct: 124 MLELAKTDYDVIKKRVTWAQARETFVARGEDYKVAILDENISQDAHPALYHHQEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKL K+AGAYWRG+S+  ML RIYGTAW  +++L  YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLQKIAGAYWRGNSDNKMLQRIYGTAWADKKQLKAYLERLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G+ FWH  GW IF+ L +++R K+K+ DY+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMAFWHNDGWTIFRELETFVRCKLKEYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW++Y+ NMF       T  + R + +KPMNCPGHV +F  GL+SYR+LP+R+A
Sbjct: 303 LWEKTGHWENYKENMFT------TSSENREYCIKPMNCPGHVQIFKQGLRSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT+EQ+ +E      LI  +Y  FGFEKI
Sbjct: 357 EFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQILSEVNNCIKLIYDVYSTFGFEKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+G DALWD AE       D  K  + + I      GEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEKRIGEDALWDIAET------DLAKALTDNNIEFEYQPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF+LP R  A YV  ++E+  PVM+HRAV GS+ERFIGI+ E + 
Sbjct: 471 YDCLDRAWQCGTVQLDFSLPGRLGASYVAENNERKVPVMLHRAVLGSLERFIGILTEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P Q +V  IT    +Y Q++   L+   +  + D RNE I +KIREH+++++
Sbjct: 531 GFFPTWLAPQQVVVMNITDGQADYVQKLVKELQDAGIRAKADLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++CGDKE     + +R
Sbjct: 591 PYMLVCGDKEVESGKVAVR 609


>gi|71282219|ref|YP_269610.1| threonyl-tRNA synthetase [Colwellia psychrerythraea 34H]
 gi|123747383|sp|Q480A9|SYT_COLP3 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|71147959|gb|AAZ28432.1| threonyl-tRNA synthetase [Colwellia psychrerythraea 34H]
          Length = 636

 Score =  630 bits (1626), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 301/641 (46%), Positives = 417/641 (65%), Gaps = 16/641 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS ++F    +  DVA  I   LAK  +A  I+G + D  + + ++ S+++IT +
Sbjct: 4   ITLPDGSQRSFEQAVSVMDVALDIGPGLAKATIAGRIDGNLVDACELITQDASLQLITSK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ ++P V++AIGP IE+GFYYD D ++  S D+L ++EK+
Sbjct: 64  DSEGLEIIRHSCAHLLGHAIKQLYPNVKMAIGPTIENGFYYDIDLDESISEDDLVKLEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+       +K+  S + A + F  + E YK+ IL E+I   +   LY   E+ D+CR
Sbjct: 124 MTELARTGYEVVKKTGSWQDAYDAFTERGETYKLAILDENIEKTDTPALYHHQEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV S      F KLMKVAGAYWRGDS+  ML RIYGTAW  +++L  Y+  L E+EKR
Sbjct: 184 GPHVPSMRHCHHF-KLMKVAGAYWRGDSDNKMLQRIYGTAWADKKQLKAYIVRLAEAEKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ + +DLFH  E+  G++FWH  GW I+  L  ++R K+ + DY+E+  P ++D+ 
Sbjct: 243 DHRKIGKTLDLFHWQEEAPGMVFWHNDGWTIYTELEKFIREKLHEYDYDEVKAPMMMDRS 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKSGHWDKYADGMFT------TTSEKREYAIKPMNCPGHVQIFNQGLKSYRDLPLRIA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFG  +RNEPSGSLHGLMRVRGFTQDDAH+FC + Q+  E  K   ++  +Y  FGFE +
Sbjct: 357 EFGCCHRNEPSGSLHGLMRVRGFTQDDAHIFCMESQVQAEVKKCIEMVYDVYGSFGFEDV 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRP+ R+GSD +WD AE    G+   + +S+   I    L GEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPDNRIGSDEIWDKAE---AGLAQALTDSN---IAFEYLPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D +GR WQCGT+Q+DF LP R  A YV   +E+  PVMIHRA+ GS+ERFIGI+IE F 
Sbjct: 471 MDCLGRAWQCGTVQLDFALPERLGATYVGEDNERYTPVMIHRAILGSLERFIGILIEEFT 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WLSPIQ  +  IT     Y +++   LK +    + D RNE I +KIREH++K++
Sbjct: 531 GKFPTWLSPIQTTIMNITDKQAPYCEKVVKKLKENGFRAKIDLRNEKIGFKIREHTLKRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P +++ GDKE     I +R        K+S+ D I  L+ E
Sbjct: 591 PYLLVVGDKEMESGEISVRTRSGEDLGKMSVDDFIAKLSDE 631


>gi|172087694|ref|YP_204597.2| threonyl-tRNA synthetase [Vibrio fischeri ES114]
 gi|197335357|ref|YP_002156016.1| threonyl-tRNA synthetase [Vibrio fischeri MJ11]
 gi|171902287|gb|AAW85709.2| threonyl-tRNA synthetase [Vibrio fischeri ES114]
 gi|197316847|gb|ACH66294.1| threonyl-tRNA synthetase [Vibrio fischeri MJ11]
          Length = 642

 Score =  630 bits (1626), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 297/641 (46%), Positives = 427/641 (66%), Gaps = 16/641 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  DVA  I   LAK  +A  ++G   D  D +  +  +EIIT +
Sbjct: 4   ITLPDGSQRQFDNAVSTMDVAADIGPGLAKACIAGRVDGVRVDACDLIENDAQLEIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  AV+ ++PE ++AIGP I++GFYYD D E   + ++L +IEK+
Sbjct: 64  DEDGLEIIRHSCAHLLGHAVKQLFPEAKMAIGPTIDNGFYYDIDMEHSLTQEDLDKIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M+++       +K+ +S ++AR+ FE++ E YK+EIL E++   +   LY   E+ D+CR
Sbjct: 124 MKDLAKTKYQVIKKNVSWQEARDTFEARGETYKIEILDENVSKDDRPGLYHHEEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +    + F K++ VAGAYWRG+S+  ML R+YGTA+  ++ L  +L  LEE+ KR
Sbjct: 184 GPHVPNMSFCQNF-KILNVAGAYWRGNSDNKMLQRVYGTAFQDKKLLKAHLIRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DLFH+ ++  G++FWH  GW IF+ L  ++R K+   DY+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLFHMQQEAPGMVFWHHNGWTIFRELEVFVREKLTQYDYQEVKGPLMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWERSGHWDKYAEAMFT------TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSG+LHG+MRVRGFTQDDAHVFCT+ Q+  E      ++   Y+ FGF+ I
Sbjct: 357 EFGSCHRNEPSGALHGIMRVRGFTQDDAHVFCTEAQVQQEVKSCIEMVYDTYQTFGFDNI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPE+RVGSD +WD AE+ +K  L++++      I   +  GEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEQRVGSDEMWDRAESDLKLALESME------IPYEIQEGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF LP R  A YV   +E+  PVMIHRA+ GS+ERFIGI+IE++ 
Sbjct: 471 HDCLDRAWQCGTVQLDFALPERLGATYVGEDNERHTPVMIHRAILGSLERFIGILIEDYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P QAIV  IT    +Y QEIA  L+ +   ++ D RNE I +KIREH++K++
Sbjct: 531 GFFPTWLAPEQAIVMGITDKQADYVQEIAKKLQKNGFRVKADLRNEKIGFKIREHTLKRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P +++CGD+E     I +R        K  + D +  L +E
Sbjct: 591 PYMLVCGDQEMEAGEIAVRTRKGKDLGKFKIDDFVAFLQQE 631


>gi|213650865|ref|ZP_03380918.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. J185]
          Length = 622

 Score =  630 bits (1625), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 293/623 (47%), Positives = 422/623 (67%), Gaps = 16/623 (2%)

Query: 25  DVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAE 83
           DVA  I   LAK  +A  +NG++ D SD +  + ++ IIT +D   L +IRHSCAH++  
Sbjct: 2   DVALDIGPGLAKATIAGRVNGELVDASDLIENDATLSIITAKDEEGLEIIRHSCAHLLGH 61

Query: 84  AVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSH 143
           A++ +WP  ++AIGP++++GFYYD D ++  + +++  +EK+M E+  ++   +K+ +S 
Sbjct: 62  AIKQLWPHTKMAIGPVVDNGFYYDVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVSW 121

Query: 144 EKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMK 202
            +ARE F  + E+YKV IL E+I   +   LY   E+ D+CRGPHV +  +    FKLMK
Sbjct: 122 HEARETFVKRGESYKVSILDENIAHDDKPGLYHHEEYVDMCRGPHVPNM-RFCHHFKLMK 180

Query: 203 VAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDG 262
            AGAYWRGDSN  ML RIYGTAW  ++ L  YL  LEE+ KRDHRK+ +++DL+H+ E+ 
Sbjct: 181 TAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEA 240

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
            G++FWH  GW IF+ L  ++R K+K+  Y+E+  P ++D+ LW+++GHWD+Y+  MF  
Sbjct: 241 PGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFT- 299

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
                T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+AEFGS +RNEPSG+LHGLM
Sbjct: 300 -----TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGLM 354

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALW 441
           RVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  FGFEKI+VKLSTRP+KR+GSD +W
Sbjct: 355 RVRGFTQDDAHIFCTEEQIRDEVNACIRMVYDMYSTFGFEKIVVKLSTRPDKRIGSDEMW 414

Query: 442 DDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFN 501
           D AE  +   L+      ++ I     LGEGAFYGPK E+ L D + R WQCGT+Q+DF+
Sbjct: 415 DRAEADLAVALE------ENNIPFEYQLGEGAFYGPKIEFTLYDCLDRAWQCGTVQLDFS 468

Query: 502 LPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT 561
           LPSR +A YV   +E+  PVMIHRA+ GS+ERFIGI+ E F G  P WL+P+Q +V  IT
Sbjct: 469 LPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVVMNIT 528

Query: 562 SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
            S  EY  E+   L++  + ++ D RNE I +KIREH+++++P +++CGDKE     + +
Sbjct: 529 DSQSEYVNELTQKLQNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAV 588

Query: 622 RRFGSTTTQKVSLLDAIPILTKE 644
           R         + + D I  L +E
Sbjct: 589 RTRRGKDLGSLDVNDVIEKLQQE 611


>gi|315126513|ref|YP_004068516.1| threonyl-tRNA synthetase [Pseudoalteromonas sp. SM9913]
 gi|315015027|gb|ADT68365.1| threonyl-tRNA synthetase [Pseudoalteromonas sp. SM9913]
          Length = 636

 Score =  630 bits (1625), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 302/641 (47%), Positives = 423/641 (65%), Gaps = 16/641 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPE 65
           +T PDGS ++F    +  DVA  I   LAK  +A  +NG+  D  D +   S +EIIT +
Sbjct: 4   ITLPDGSQRSFENPVSTLDVANDIGPGLAKATIAGRVNGERVDACDLISADSRLEIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  AV+ ++P+ ++AIGP I++GFYYD D E   S D+L  IEK+
Sbjct: 64  DDDGLEIIRHSCAHLIGHAVKQLFPDAKMAIGPTIDNGFYYDIDMEHSLSQDDLDAIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M ++   +   +K+ +S ++AR+ F ++ E YK+EIL E+I   +   LY   E+ D+CR
Sbjct: 124 MLQLAKTNYDVVKKTVSWQEARDTFAARGETYKIEILDENIAQDDRPGLYHHEEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +  + FK+MKVAGAYWRGDS   ML RIYGTAW  +++L  YL  LEE+EKR
Sbjct: 184 GPHVPNM-KFCQNFKIMKVAGAYWRGDSENKMLQRIYGTAWGDKKQLKAYLKRLEEAEKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHR++ + +DL+H  E+  G++FWH  GW I++ L  ++R K+++  YEE+  P ++D+ 
Sbjct: 243 DHRRIGKALDLWHWQEEAPGMVFWHNDGWSIYRELEEFVREKLREYQYEEVKGPMMMDRS 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SGHW+ Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKSGHWEKYSEAMFT------TESEKREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFG  +RNEPSG+LHGLMRVRGFTQDDAHVFCT+EQ+ +E      ++   Y+ FGFEKI
Sbjct: 357 EFGCCHRNEPSGALHGLMRVRGFTQDDAHVFCTEEQIMDEVSACIKMVYDTYETFGFEKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPE+R+G D +WD AE     + D +K +    I    L GEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEQRIGEDEMWDKAE---LALADALKAND---IEFDYLPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF LP R  A YV  ++E+  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 YDCLDRAWQCGTVQLDFALPGRLGATYVAENNERRTPVMIHRAILGSIERFIGILTEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P Q ++  IT     Y QEI   L    +    D RNE I +KIREH++K+I
Sbjct: 531 GLFPTWLAPKQVVIMNITDKQAPYVQEIVQKLNKLGIRAAADLRNEKIGFKIREHTLKRI 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P +++ GDKE  ++ + +R        K ++ D I  +++E
Sbjct: 591 PYLLVVGDKEVEQQEVAVRTRTGEDLGKFNVDDFIAKISEE 631


>gi|212711437|ref|ZP_03319565.1| hypothetical protein PROVALCAL_02510 [Providencia alcalifaciens DSM
           30120]
 gi|212685893|gb|EEB45421.1| hypothetical protein PROVALCAL_02510 [Providencia alcalifaciens DSM
           30120]
          Length = 653

 Score =  630 bits (1625), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 293/619 (47%), Positives = 419/619 (67%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  DVA  I   LAK  +A  +NG++ D  + +  + ++ IIT +
Sbjct: 15  ITLPDGSQRQFDHAVSVMDVARDIGAGLAKACIAGRVNGELVDACELIEHDANLSIITSK 74

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ +WP  ++AIGP+I++GFYYD D +   + ++L ++EK+
Sbjct: 75  DDEGLEIIRHSCAHLLGHAIKQLWPNTKMAIGPVIDNGFYYDIDLDYTLTQEDLDKLEKR 134

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   D   +K+ +S  +ARE F S+ E YKVEIL ++I   +   LY   E+ D+CR
Sbjct: 135 MLELAKTDYDVVKKRVSWAEARETFVSRGEDYKVEILDQNISQDDRPGLYHHQEYIDMCR 194

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKL KVAGAYWRG+S+  ML RIYGTAW  +++L  YL  LEE+ KR
Sbjct: 195 GPHVPNM-RFCHHFKLQKVAGAYWRGNSDNKMLQRIYGTAWADKKQLAAYLLRLEEAAKR 253

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G+ FWH  GW IF+ L +++R K+K  +Y+E+  P ++D+ 
Sbjct: 254 DHRKIGKQLDLYHMQEEAPGMAFWHNDGWTIFRELETFVRTKLKSYNYQEVKGPFMMDRV 313

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW++Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 314 LWERTGHWENYKDAMFT------TSSENREYCVKPMNCPGHVQIFNQGLKSYRDLPLRMA 367

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT++Q+  E      +I  +Y  FGFEKI
Sbjct: 368 EFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEDQILGEVTSCIEMIYDVYSTFGFEKI 427

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+G+D +WD AE  +   L +        I      GEGAFYGPK E+ L
Sbjct: 428 VVKLSTRPEKRIGTDDMWDTAEADLANALKS------KGIEFEYQPGEGAFYGPKIEFTL 481

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF LP R NA YV  ++E+  PVMIHRAV GS+ERFIGI+ E + 
Sbjct: 482 YDCLDRAWQCGTVQLDFFLPGRLNASYVGENNERITPVMIHRAVLGSLERFIGILTEEYA 541

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P Q +V  IT S  +Y QE+ + L+S  +  + D RNE I +KIREH+++++
Sbjct: 542 GFFPTWLAPQQVVVMNITDSQADYVQELVSKLQSVGIRAKADLRNEKIGFKIREHTLRRV 601

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++CG+KE     + +R
Sbjct: 602 PYMLVCGEKEVESGKVSVR 620


>gi|317047868|ref|YP_004115516.1| threonyl-tRNA synthetase [Pantoea sp. At-9b]
 gi|316949485|gb|ADU68960.1| threonyl-tRNA synthetase [Pantoea sp. At-9b]
          Length = 642

 Score =  630 bits (1625), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 286/619 (46%), Positives = 426/619 (68%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPE 65
           +T PDGS ++F    +  D+A  I   LAK  +A  +NG++ D  D + +   + IIT +
Sbjct: 4   ITLPDGSQRSFDRPVSVMDIALDIGPGLAKACIAGRVNGELVDAVDLIHDDAQVAIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ +WP  ++AIGP+I++GFYYD D +   + +++ Q+EK+
Sbjct: 64  DEAGLEIIRHSCAHLLGHAIKQLWPNTKMAIGPVIDNGFYYDVDLDHTLTQEDIEQLEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M ++   +   +K+ +S ++AR++F ++ E+YK  IL E+I   +   LY   E+ D+CR
Sbjct: 124 MHQLAETNYDVIKKKVSWQEARDVFAARGESYKTTILDENISHDDRPGLYHHEEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKL K++GAYWRGDSN  ML RIYGTAW  +++L  YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLQKISGAYWRGDSNNKMLQRIYGTAWADKKQLAAYLQRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF+ L  ++R K+K+  Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW++Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWENYKEAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+ +E      ++  +Y  FGFEKI
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQVRDEVNSCIRMVYDMYSTFGFEKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+G+D +WD AE      +D  +   +++I      GEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEKRIGTDEMWDRAE------VDLAEALKENQIPFEYQPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF+LP R +A YV  ++++  PVMIHRA+ GS+ERFIGI+ E F 
Sbjct: 471 HDCLDRAWQCGTVQLDFSLPKRLDATYVGENNDRQTPVMIHRAILGSMERFIGILTEEFA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+QA+V  IT S  EY  E+   L++  + ++ D RNE I +KIREH+++++
Sbjct: 531 GFFPSWLAPVQAVVMNITDSQAEYVSELTKKLQNAGIRVKADLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++CG+KE     + +R
Sbjct: 591 PYMLVCGEKEVEAGKVAVR 609


>gi|319776351|ref|YP_004138839.1| threonyl-tRNA synthetase [Haemophilus influenzae F3047]
 gi|329123506|ref|ZP_08252070.1| threonine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
 gi|317450942|emb|CBY87169.1| threonyl-tRNA synthetase [Haemophilus influenzae F3047]
 gi|327471088|gb|EGF16543.1| threonine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
          Length = 643

 Score =  630 bits (1625), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 290/619 (46%), Positives = 422/619 (68%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS + F    +  +VA+ I   LAK  +A  +NG+  D  D + ++ ++EIIT +
Sbjct: 4   ITLPDGSQRQFDRPVSVLEVAQDIGAGLAKATIAGRVNGERRDACDVIEQDATLEIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ ++P+V++AIGP IE+GFYYD D ++  + +++  IEK+
Sbjct: 64  DEDGLEIIRHSCAHLLGHAIKQLFPDVKMAIGPTIENGFYYDVDLDRSLTQEDIDAIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K+ ++ ++AR+ FE + E+YK+ IL E+I       LY   E+ D+CR
Sbjct: 124 MLELAKTNYDVVKKRVTWQEARDTFEKRGESYKMAILDENIERTATPALYHHLEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +  + FKL KVAGAYWRGDS   ML RIYGTAW  +++L +YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCQHFKLQKVAGAYWRGDSKNKMLQRIYGTAWADKKQLAEYLTRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ + +DL+H+ E+  G++FWH  GW IF+ L +++R K+K  DY+E+  P ++D+ 
Sbjct: 243 DHRKIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW +Y   MF  +  +      R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWQNYADLMFTTQSEN------REYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+ +E      ++  IY  FGF  I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQIESEVTSCIKMVYDIYSTFGFTNI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPE R+GSD +WD      +         + + +   +  GEGAFYGPK E+ L
Sbjct: 417 AVKLSTRPENRIGSDEMWD------RAEGGLAAALAHNGLEYEIQEGEGAFYGPKIEFAL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D +GR+WQCGT+Q+DF LP R +A YV   + +  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 RDCLGREWQCGTVQLDFALPGRLDATYVAEDNSRKTPVMIHRAILGSIERFIGIITEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P QA+V  IT S  +Y Q++A  L    L ++TD RNE + +KIREH+++++
Sbjct: 531 GFFPAWLAPTQAVVMNITDSQADYVQKVAKQLSDVGLRVKTDLRNEKVGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++CGDKE +E  + +R
Sbjct: 591 PYMLVCGDKEIAEGKVAVR 609


>gi|307245030|ref|ZP_07527126.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
 gi|307253984|ref|ZP_07535834.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9
           str. CVJ13261]
 gi|307258439|ref|ZP_07540179.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           11 str. 56153]
 gi|306854073|gb|EFM86282.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
 gi|306863062|gb|EFM95006.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9
           str. CVJ13261]
 gi|306867501|gb|EFM99349.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           11 str. 56153]
          Length = 643

 Score =  630 bits (1625), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 291/619 (47%), Positives = 422/619 (68%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPE 65
           +T PDGS + F    +  +VA+SI   LAK  +A  +NG+  D  D + E  S+EIIT +
Sbjct: 4   ITLPDGSQRQFDNPVSVMEVAQSIGAGLAKATIAGRVNGERRDACDIISEDSSLEIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ ++P+V++AIGP I++GFYYD D ++  + ++L  IEK+
Sbjct: 64  DEDGLEIIRHSCAHLLGHAIKQLFPDVKMAIGPTIDNGFYYDVDLDRSLTQEDLDAIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K+ +S ++AR+ FE + E YK+ IL E+I       LY   E+ D+CR
Sbjct: 124 MLELAKTNYDVVKKRVSWQEARDTFEKRGEPYKMAILDENIERTATPALYHHEEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKL KVAGAYWRGDS   ML RIYGTAW  +++L +YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLQKVAGAYWRGDSKNKMLQRIYGTAWADKKQLAEYLTRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHR++ + +DL+H+ E+  G++FWH  GW IF+ L +++R K+K+ DY+E+  P ++D+ 
Sbjct: 243 DHRRIGKALDLYHMQEEAPGLVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW +Y   MF  +  +      R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWERTGHWQNYADLMFTTQSEN------REYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+ +E      ++  IY  FGF  I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQIESEVTSCIRMVYDIYSTFGFSNI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPE R+G DA+WD AE+ +   L      + + ++  +  GEGAFYGPK E+ L
Sbjct: 417 QVKLSTRPENRIGDDAMWDRAEDGLAKAL------TANGLSYEIQEGEGAFYGPKIEFAL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D + R+WQCGTIQ+DF LP R +A YV   + +  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 RDCLDREWQCGTIQLDFALPGRLDASYVAEDNGRRTPVMIHRAILGSIERFIGIITEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P QA+V  IT S  +Y Q++   L    + +++D RNE + +K+REH+++++
Sbjct: 531 GFFPTWLAPTQAVVMNITDSQADYVQKVTKALSDAGIRVKSDLRNEKVGFKVREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++CGDKE     + +R
Sbjct: 591 PYMLVCGDKEIEAGKVSVR 609


>gi|260582696|ref|ZP_05850484.1| threonyl-tRNA synthetase [Haemophilus influenzae NT127]
 gi|260094262|gb|EEW78162.1| threonyl-tRNA synthetase [Haemophilus influenzae NT127]
          Length = 643

 Score =  630 bits (1625), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 291/619 (47%), Positives = 421/619 (68%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS + F    +  +VA+ I   LAK  +A  +NG+  D  D + ++ ++EIIT +
Sbjct: 4   ITLPDGSQRQFDRPVSVLEVAQDIGAGLAKATIAGRVNGERRDACDVIEQDATLEIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ ++P+V++AIGP IE+GFYYD D ++  + ++L  IEK+
Sbjct: 64  DEDGLEIIRHSCAHLLGHAIKQLFPDVKMAIGPTIENGFYYDVDLDRSLTQEDLDAIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K+ ++ ++AR+ FE + E YK+ IL E+I       LY   E+ D+CR
Sbjct: 124 MLELAKTNYDVVKKRVTWQEARDTFEKRGEPYKMAILDENIERTATPALYHHLEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +  + FKL KVAGAYWRGDS   ML RIYGTAW  +++L +YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCQHFKLQKVAGAYWRGDSKNKMLQRIYGTAWADKKQLAEYLTRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ + +DL+H+ E+  G++FWH  GW IF+ L +++R K+K  DY+E+  P ++D+ 
Sbjct: 243 DHRKIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW +Y   MF  +  +      R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWQNYADLMFTTQSEN------REYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+ +E      ++  IY  FGF  I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQIESEVTSCIKMVYDIYSTFGFTNI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPE R+GSD +WD      +         + + +   +  GEGAFYGPK E+ L
Sbjct: 417 AVKLSTRPENRIGSDEMWD------RAEAGLAAALAHNGLEYEIQEGEGAFYGPKIEFAL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D +GR+WQCGT+Q+DF LP R +A YV   + +  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 RDCLGREWQCGTVQLDFALPGRLDATYVAEDNSRKTPVMIHRAILGSIERFIGIITEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P QA+V  IT S  +Y Q++A  L    L ++TD RNE + +KIREH+++++
Sbjct: 531 GFFPAWLAPTQAVVMNITDSQADYVQKVAKQLSDVGLRVKTDLRNEKVGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++CGDKE +E  + +R
Sbjct: 591 PYMLVCGDKEIAEGKVAVR 609


>gi|330503839|ref|YP_004380708.1| threonyl-tRNA synthetase [Pseudomonas mendocina NK-01]
 gi|328918125|gb|AEB58956.1| threonyl-tRNA synthetase [Pseudomonas mendocina NK-01]
          Length = 640

 Score =  630 bits (1625), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 285/618 (46%), Positives = 420/618 (67%), Gaps = 15/618 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS ++F    +  +VA+SI   LAK  +A  +NGK  D  D +  + +++IITP+
Sbjct: 4   ITLPDGSQRSFDHPVSVLEVAQSIGAGLAKATLAGKVNGKQVDACDVIDTDATLQIITPK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  AV+ ++P  ++ IGP+I++GFYYD   ++PF+ +++A IEK+
Sbjct: 64  DEEGLEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIDEGFYYDIAIDRPFTPEDMAAIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M E+I +D   +K+     +  ELF+S+ E YK+ +++ +P ++ + LY   E+ D+CRG
Sbjct: 124 MAELIDKDYDVIKRMTPRAEVIELFKSRGEEYKLRLIDDMPDEQAMGLYFHEEYVDMCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +T +  K FKL +++GAYWRGDS    L R+YGTAW  +++L  Y+  +EE+EKRD
Sbjct: 184 PHVPNT-RFLKAFKLTRISGAYWRGDSKNEQLQRVYGTAWADKKQLAAYIQRIEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHL 304
           HR++ +++DLFH+ E+  G++FWH  GW ++Q L  YMR+  ++  Y E+ TPQV+D+ L
Sbjct: 243 HRRIGKQLDLFHLQEEAPGMVFWHPNGWTVYQVLEQYMRQVQREHGYVEVRTPQVVDRIL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHW +Y  NMF       T  + R +A+KPMNCP HV +FN GLKSYR+LP+RLAE
Sbjct: 303 WERSGHWSNYAENMFT------TASENRDYAVKPMNCPCHVQIFNQGLKSYRDLPLRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FG+ +RNEPSG+LHG+MRVRGF QDDAH+FCT++Q+  E      L + +Y DFGF  I 
Sbjct: 357 FGACHRNEPSGALHGIMRVRGFVQDDAHIFCTEDQVKKEAADFIRLTLQVYSDFGFTDIA 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +KLSTRP KRVGSD LWD AE  +   L+      +  +      GEGAFYGPK E+ L+
Sbjct: 417 MKLSTRPAKRVGSDELWDRAEGALAEALN------ESGLAWEYQPGEGAFYGPKIEFTLR 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D +GR+WQCGT+Q D NLP R +A Y+   + +  PVM+HRA+ GS ERFIG++IE++ G
Sbjct: 471 DCLGRNWQCGTLQYDPNLPERLDASYIAEDNNRKRPVMLHRAILGSFERFIGMLIEHYAG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
           + P WL+P QA++  IT    ++A+E    L       + D RNE I +KIREH++ K+P
Sbjct: 531 SFPAWLAPTQAVIMNITDKQADFAREAEKTLNQSGFRAKVDLRNEKIGFKIREHTLLKVP 590

Query: 605 IIIICGDKEASERSIGIR 622
            +++ GD+E   RS+ +R
Sbjct: 591 YLLVIGDREVETRSVAVR 608


>gi|218709221|ref|YP_002416842.1| threonyl-tRNA synthetase [Vibrio splendidus LGP32]
 gi|218322240|emb|CAV18357.1| Threonyl-tRNA synthetase [Vibrio splendidus LGP32]
          Length = 655

 Score =  630 bits (1625), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 302/642 (47%), Positives = 426/642 (66%), Gaps = 17/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  DVA SI   LAK  +A  ++G+  D  D +  + S+EIIT +
Sbjct: 17  ITLPDGSQRQFDNPVSTLDVALSIGPGLAKATIAGRVDGERVDACDLIENDASLEIITAK 76

Query: 66  DP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  A++ ++PE ++AIGP I++GFYYD D E   + ++L +IEK
Sbjct: 77  DEVDGLEIVRHSCAHLLGHAIKQLFPEAKMAIGPTIDNGFYYDIDLEHSLTQEDLEKIEK 136

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLC 183
           +M+E+       +K+ +S ++AR+ FE++ E YK+EIL E++   +   LY   E+ D+C
Sbjct: 137 RMKELAKTKYQVVKKKVSWQEARDAFEARGETYKIEILDENVSKDDRPGLYHHEEYIDMC 196

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV   G   + F L+ VAGAYWRG+S+  ML RIYGTA++ ++ L  +L  LEE+ K
Sbjct: 197 RGPHVPHMG-FCQHFTLLNVAGAYWRGNSDNKMLQRIYGTAFHDKKALKAHLVRLEEAAK 255

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRK+ + +DLFH+ ++  G++FWH  GW IF+ L  ++R+K+ + DY+E+  P ++D+
Sbjct: 256 RDHRKIGKHLDLFHMQQEAPGMVFWHHNGWTIFRELEVFIRQKLTEYDYQEVKGPLMMDR 315

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+
Sbjct: 316 VLWERSGHWDKYAEAMFT------TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRM 369

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHG+MRVRGFTQDDAHVFCT++Q+  E      ++   Y  FGFE 
Sbjct: 370 AEFGSCHRNEPSGALHGIMRVRGFTQDDAHVFCTEDQVQQEVKACIEMVYDTYTTFGFEN 429

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+VKLSTRPE+RVGSD +WD AE  +K  L+ ++      I   +  GEGAFYGPK E+ 
Sbjct: 430 IVVKLSTRPEQRVGSDEMWDRAEADLKQALEAME------IAYEIQEGEGAFYGPKIEFT 483

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D + R WQCGT+Q+DF LP R  A YV   +E+  PVMIHRA+ GS+ERFIGI+IE +
Sbjct: 484 LHDCLDRAWQCGTVQLDFALPERLGATYVGEDNERHTPVMIHRAILGSLERFIGILIEEY 543

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P QAIV  IT    EY QEIA  L+     ++ D RNE I +KIREH++K+
Sbjct: 544 AGFFPTWLAPEQAIVMGITDKQSEYVQEIAKKLQKSGFRVKADLRNEKIGFKIREHTLKR 603

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P +++CGD+E     I +R        K  + D I  +  E
Sbjct: 604 VPFMLVCGDQEMEAGEIAVRTRKGKDLGKFKVDDFISYIQAE 645


>gi|327252835|gb|EGE64489.1| threonyl-tRNA synthetase [Escherichia coli STEC_7v]
          Length = 622

 Score =  630 bits (1624), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 291/601 (48%), Positives = 414/601 (68%), Gaps = 16/601 (2%)

Query: 25  DVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAE 83
           DVA  I   LAK  +A  +NG++ D  D +  +  + IIT +D   L +IRHSCAH++  
Sbjct: 2   DVALDIGPGLAKACIAGRVNGELVDACDLIENDAQLSIITAKDEEGLEIIRHSCAHLLGH 61

Query: 84  AVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSH 143
           A++ +WP  ++AIGP+I++GFYYD D ++  + +++  +EK+M E+  ++   +K+ +S 
Sbjct: 62  AIKQLWPHTKMAIGPVIDNGFYYDVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVSW 121

Query: 144 EKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMK 202
            +ARE F ++ E+YKV IL E+I   +   LY   E+ D+CRGPHV +  +    FKLMK
Sbjct: 122 HEARETFANRGESYKVSILDENIAHDDKPGLYFHEEYVDMCRGPHVPNM-RFCHHFKLMK 180

Query: 203 VAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDG 262
            AGAYWRGDSN  ML RIYGTAW  ++ L  YL  LEE+ KRDHRK+ +++DL+H+ E+ 
Sbjct: 181 TAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEA 240

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
            G++FWH  GW IF+ L  ++R K+K+  Y+E+  P ++D+ LW+++GHWD+Y+  MF  
Sbjct: 241 PGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFT- 299

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
                T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+AEFGS +RNEPSGSLHGLM
Sbjct: 300 -----TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLM 354

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALW 441
           RVRGFTQDDAH+FCT+EQ+ +E      L+  +Y  FGFEKI+VKLSTRPEKR+GSD +W
Sbjct: 355 RVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEKIVVKLSTRPEKRIGSDEMW 414

Query: 442 DDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFN 501
           D AE  +   L+      ++ I     LGEGAFYGPK E+ L D + R WQCGT+Q+DF+
Sbjct: 415 DRAEADLAVALE------ENNIPFEYQLGEGAFYGPKIEFTLYDCLDRAWQCGTVQLDFS 468

Query: 502 LPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT 561
           LPSR +A YV   +E+  PVMIHRA+ GS+ERFIGI+ E F G  P+WL+P+Q ++  IT
Sbjct: 469 LPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAGFFPIWLAPVQVVIMNIT 528

Query: 562 SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
            S  EY  E+   L +  + ++ D RNE I +KIREH+++++P +++CGDKE     + +
Sbjct: 529 DSQSEYVNELTQKLSNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAV 588

Query: 622 R 622
           R
Sbjct: 589 R 589


>gi|300716458|ref|YP_003741261.1| Threonyl-tRNA synthetase [Erwinia billingiae Eb661]
 gi|299062294|emb|CAX59411.1| Threonyl-tRNA synthetase [Erwinia billingiae Eb661]
          Length = 642

 Score =  630 bits (1624), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 285/619 (46%), Positives = 423/619 (68%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPE 65
           +T PDGS ++F    +  D+A+ I   LAK  +A  +NG++ D  DP+ E  ++ IIT +
Sbjct: 4   ITLPDGSQRSFDHAVSVMDIAQDIGPGLAKACIAGRVNGELVDAVDPITEDANVAIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D ++  + +++ Q+EK+
Sbjct: 64  DEAGLEIIRHSCAHLLGHAIKQLWPDTKMAIGPVIDNGFYYDVDIDRTLTQEDIEQLEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M ++   +   +K+ +S ++AR+ F ++ E YK+ IL E+I   +   LY   E+ D+CR
Sbjct: 124 MHQLAETNYDVIKKKVSWQEARDAFAARGETYKITILDENISHDDQPGLYHHEEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKL K++GAYWRGDSN  ML RIYGTAW  +++L  YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLQKISGAYWRGDSNNKMLQRIYGTAWADKKQLAAYLLRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF+ L  ++R K+ + DY+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLTEYDYQEVKGPLMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW++Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWENYKEAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT+EQ+  E      ++  +Y  FGFEKI
Sbjct: 357 EFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQVRTEVNSCIRMVYDMYSTFGFEKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRP KR+G++  WD AE  +   L       ++ I      GEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPVKRIGTEEQWDRAEADLAAAL------KENDIPFEYQPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF+LPSR +A Y+  ++E+  PVMIHRA+ GS+ERFIGI+ E + 
Sbjct: 471 HDCLDRAWQCGTVQLDFSLPSRLSASYIGENNERQVPVMIHRAILGSVERFIGILTEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+Q +V  IT    EY  E+   L++  +  + D RNE I +KIREH+++++
Sbjct: 531 GFFPTWLAPVQVVVMNITDGQSEYVAELTRKLQNAGIRAKADLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++CGDKE     + +R
Sbjct: 591 PYMLVCGDKEVESGKVAVR 609


>gi|77458158|ref|YP_347663.1| threonyl-tRNA synthetase [Pseudomonas fluorescens Pf0-1]
 gi|123758422|sp|Q3KEY2|SYT_PSEPF RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|77382161|gb|ABA73674.1| putative threonyl-tRNA synthetase [Pseudomonas fluorescens Pf0-1]
          Length = 640

 Score =  630 bits (1624), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 293/642 (45%), Positives = 430/642 (66%), Gaps = 24/642 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP+   +T PDGS ++F    + ++VA SI   LAK  VA  +NGK+ D  D +  + ++
Sbjct: 1   MPT---ITLPDGSQRSFDHPVSVAEVAASIGAGLAKATVAGKVNGKLVDACDIIDSDATL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           +IITP+D   L +IRHSCAH++  AV+ ++P  ++ IGP+I++GFYYD   E+PF+ D++
Sbjct: 58  QIITPKDEEGLEIIRHSCAHLVGHAVKQLYPTAKMVIGPVIDEGFYYDIAFERPFTPDDM 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A IE++M ++I  +   +K+     +  E+F+++ E YK+ ++E +P ++ + LY   E+
Sbjct: 118 AAIEQRMHQLIDTEYDVIKKVTPRAEVIEVFKARGEDYKLRLVEDMPNEQAMGLYYHEEY 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            D+CRGPHV +T +  K FKL K++GAYWRGD+    L R+YGTAW  +++L  Y+  +E
Sbjct: 178 VDMCRGPHVPNT-RFLKSFKLTKLSGAYWRGDAKNEQLQRVYGTAWADKKQLAAYIQRIE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQ 298
           E+EKRDHRK+ + + LFH  E+  G++FWH  GW ++Q L  YMR+  +D+ Y EI TPQ
Sbjct: 237 EAEKRDHRKIGKRLGLFHTQEEAPGMVFWHPNGWTLYQVLEQYMRKVQRDNGYLEIKTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHW +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYREL
Sbjct: 297 VVDRSLWEKSGHWANYADNMFT------TESESRDYAIKPMNCPCHVQVFNQGLKSYREL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFG+ +RNEPSG+LHG+MRVR FTQDDAH+FCT+EQM  E      L + +Y+DF
Sbjct: 351 PMRLAEFGACHRNEPSGALHGIMRVRAFTQDDAHIFCTEEQMQAESAAFIKLTMDVYRDF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF  + +KLSTRPEKRVGSD LWD      +             +   +  GEGAFYGPK
Sbjct: 411 GFTDVEMKLSTRPEKRVGSDELWD------RAEAALAAALDSAGLPYDLQPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD +GR WQCGT+Q+DFNLP R  A YV+  + + HPVM+HRA+ GS ERF+GI+
Sbjct: 465 IEFSLKDCLGRVWQCGTLQLDFNLPVRLGAEYVSEDNSRKHPVMLHRAILGSFERFVGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+++G  P WL+P QA++  IT    ++  ++   L       ++D RNE I +KIREH
Sbjct: 525 IEHYEGAFPAWLAPTQAVIMNITDKQADFVVQVEKTLNESGFRAKSDLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
           ++ K+P +++ GDKE   +++ +R      T++ + L ++P+
Sbjct: 585 TLLKVPYLLVIGDKEVEMQTVAVR------TREGADLGSMPV 620


>gi|229846781|ref|ZP_04466888.1| threonyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
 gi|229810270|gb|EEP45989.1| threonyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
          Length = 643

 Score =  630 bits (1624), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 291/619 (47%), Positives = 421/619 (68%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS + F    +  +VA+ I   LAK  +A  +NG+  D  D + ++ ++EIIT +
Sbjct: 4   ITLPDGSQRQFDNPVSVLEVAQDIGAGLAKATIAGRVNGERHDACDIIEQDATLEIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ ++P+V++AIGP IE+GFYYD D ++  + +++  IEK+
Sbjct: 64  DEDGLEIIRHSCAHLLGHAIKQLFPDVKMAIGPTIENGFYYDVDLDRSLTQEDIDAIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K+ ++ ++AR+ FE + E YK+ IL E+I       LY   E+ D+CR
Sbjct: 124 MLELAKTNYDVVKKRVTWQEARDTFEKRGEPYKMAILDENIERTATPALYHHLEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +  + FKL KVAGAYWRGDS   ML RIYGTAW  +++L +YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCQHFKLQKVAGAYWRGDSKNKMLQRIYGTAWADKKQLAEYLTRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ + +DL+H+ E+  G++FWH  GW IF+ L +++R K+K  DY+E+  P ++D+ 
Sbjct: 243 DHRKIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW +Y   MF  +  +      R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWQNYADLMFTTQSEN------REYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+ +E      ++  IY  FGF  I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQIESEVTSCIKMVYDIYSTFGFTNI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPE R+GSD +WD      +         + + +   +  GEGAFYGPK E+ L
Sbjct: 417 AVKLSTRPENRIGSDEMWD------RAEAGLAAALAHNGLEYEIQEGEGAFYGPKIEFAL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D +GR+WQCGT+Q+DF LP R +A YV   + +  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 RDCLGREWQCGTVQLDFALPGRLDATYVAEDNSRKTPVMIHRAILGSIERFIGIITEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P QA+V  IT S  +Y Q++A  L    L ++TD RNE + +KIREH+++++
Sbjct: 531 GFFPAWLAPTQAVVMNITDSQADYVQKVAKQLSDVGLRVKTDLRNEKVGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++CGDKE +E  I +R
Sbjct: 591 PYMLVCGDKEIAEGKIAVR 609


>gi|170721151|ref|YP_001748839.1| threonyl-tRNA synthetase [Pseudomonas putida W619]
 gi|229558042|sp|B1J6U4|SYT_PSEPW RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|169759154|gb|ACA72470.1| threonyl-tRNA synthetase [Pseudomonas putida W619]
          Length = 640

 Score =  629 bits (1623), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 288/642 (44%), Positives = 434/642 (67%), Gaps = 24/642 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP+   +T PDGS + F    + +DVA SI   LAK  VA  ++GK+ D  + +  + ++
Sbjct: 1   MPT---ITLPDGSQRAFDHAVSVADVAASIGAGLAKATVAGKVDGKLVDACELITHDATL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           +IITP+D   L +IRHSCAH++  AV+ ++P  ++ IGP+I++GFYYD   E+ F+ ++L
Sbjct: 58  QIITPKDEEGLEIIRHSCAHLVGHAVKQLYPTAKMVIGPVIDEGFYYDIAYERSFTPEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A IEK+MQ++I +D   +K+     +  ++F+++ E YK+ ++E +P ++ + LY   E+
Sbjct: 118 AAIEKRMQQLIEKDYDVIKKMTPRAEVIDVFKARGEDYKLRLVEDMPDEQAMGLYYHEEY 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            D+CRGPHV +T +  K FKL K++GAYWRGD+    L R+YGTAW  +++L  Y+  +E
Sbjct: 178 VDMCRGPHVPNT-RFLKAFKLTKLSGAYWRGDAKNEQLQRVYGTAWADKKQLAAYIQRIE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQ 298
           E+EKRDHRK+ +++DLFH+ E+  G++FWH  GW ++Q L  YMR+  +++ Y EI TPQ
Sbjct: 237 EAEKRDHRKIGKQLDLFHLQEEAPGMVFWHANGWTVYQVLEQYMRQVQRENGYSEIKTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHW +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYR+L
Sbjct: 297 VVDRILWERSGHWSNYAENMFT------TSSESRDYAVKPMNCPCHVQVFNQGLKSYRDL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFG+ +RNEPSG+LHG+MRVRGF QDDAH+FCT++Q+  E      L + +YKDF
Sbjct: 351 PLRLAEFGACHRNEPSGALHGIMRVRGFVQDDAHIFCTEDQVKKEAADFIKLTLDVYKDF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF  + +KLSTRP KRVGS+ LWD AE  +   L+      +  +      GEGAFYGPK
Sbjct: 411 GFTDVAMKLSTRPAKRVGSEELWDRAEGALADALN------ESGLEWEYQPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ L+D +GR+WQCGT+Q D NLP R +A Y+   + +  PVM+HRA+ GS ERFIG++
Sbjct: 465 IEFTLRDCLGRNWQCGTLQYDPNLPERLDASYIAEDNARKRPVMLHRAILGSFERFIGML 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE++ G  P WL+P QA++  IT    ++A ++   L       ++D RNE I +KIREH
Sbjct: 525 IEHYAGVFPAWLAPTQAVIMNITDKQADFALQVEKSLNGSGFRAKSDLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
           ++ K+P +++ GD+E   +++ +R      T++ + L ++P+
Sbjct: 585 TLLKVPYLLVIGDREVETQTVAVR------TREGADLGSMPV 620


>gi|301170119|emb|CBW29723.1| threonyl-tRNA synthetase [Haemophilus influenzae 10810]
          Length = 643

 Score =  629 bits (1623), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 290/619 (46%), Positives = 422/619 (68%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS + F    +  +VA+ I   LAK  +A  +NG+  D  D + ++ ++EIIT +
Sbjct: 4   ITLPDGSQRQFDRPVSVLEVAQDIGAGLAKATIAGRVNGERRDACDVIEQDATLEIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ ++P+V++AIGP IE+GFYYD D ++  + +++  IEK+
Sbjct: 64  DEDGLEIIRHSCAHLLGHAIKQLFPDVKMAIGPTIENGFYYDVDLDRSLTQEDIDAIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K+ ++ ++AR+ FE + E YK+ IL E+I       LY   E+ D+CR
Sbjct: 124 MLELAKTNYDVVKKRVTWQEARDTFEKRGEPYKMAILDENIERTATPALYHHLEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +  + FKL KVAGAYWRGDS   ML RIYGTAW  +++L +YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCQHFKLQKVAGAYWRGDSKNKMLQRIYGTAWADKKQLAKYLTRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ + +DL+H+ E+  G++FWH  GW IF+ L +++R K+K  DY+E+  P ++D+ 
Sbjct: 243 DHRKIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW +Y   MF  +  +      R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWQNYADLMFTTQSEN------REYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+ +E      ++  IY  FGF  I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQIESEVTSCIKMVYDIYSTFGFTNI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPE R+GSD +WD      +         + + +   +  GEGAFYGPK E+ L
Sbjct: 417 AVKLSTRPENRIGSDEMWD------RAEAGLAAALAHNGLEYEIQEGEGAFYGPKIEFAL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D +GR+WQCGT+Q+DF LP R +A YV   + +  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 RDCLGREWQCGTVQLDFALPGRLDATYVAEDNSRKTPVMIHRAILGSIERFIGIITEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P+WL+P QA+V  IT S  +Y Q++A  L    L ++TD RNE + +KIREH+++++
Sbjct: 531 GFFPVWLAPTQAVVINITDSQADYVQKVAKQLSDVGLRVKTDLRNEKVGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++CGDKE +E  + +R
Sbjct: 591 PYMLVCGDKEIAEGKVAVR 609


>gi|148244740|ref|YP_001219434.1| threonyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA]
 gi|166225515|sp|A5CWF9|SYT_VESOH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|146326567|dbj|BAF61710.1| threonyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA]
          Length = 636

 Score =  629 bits (1623), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 298/642 (46%), Positives = 439/642 (68%), Gaps = 17/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDG+ K F    +   VA+S+   L K A+A  ++G++   S  ++ + ++ IIT  
Sbjct: 4   ITLPDGTKKIFEQVVSVEQVAKSMG--LVKAALAGEVDGELVSTSFLIKTDANLTIITAN 61

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D + L +IRHS AH++A+A Q ++P+ QV IGP+I++GFYYDF  +  F   +L +IEK 
Sbjct: 62  DDQGLEIIRHSTAHLLAQATQMLYPDAQVTIGPVIDNGFYYDFAYKNGFLEGDLIKIEKN 121

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M +++ ++    K  +S ++  + F+ K E YKV+I+ESI   + ++LY+QG++ DLCRG
Sbjct: 122 MHKLVKQNLKIEKFEMSRDETLQFFKDKGEYYKVKIIESISTDQILSLYKQGDFIDLCRG 181

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV ST ++K F KLMK+AGAYWRGDS+  ML R+YGTAW  +Q+L  YL+ LEE  +RD
Sbjct: 182 PHVPSTAKLKNF-KLMKLAGAYWRGDSSNEMLQRVYGTAWGNEQDLKVYLHKLEEVARRD 240

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHL 304
           HRK+ +  DLFHI E+  G++FWH KGW ++Q +  YMR   +D+ Y+E++TPQ++D+ L
Sbjct: 241 HRKIGKTQDLFHIQEETPGMVFWHAKGWILYQLVEQYMRGIFRDNGYQEVHTPQLIDKSL 300

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHWD +   MF     D      R +A+KPMNCP H+ ++N GLKSYR LP+RLAE
Sbjct: 301 WEKSGHWDKFGDVMFTTTSGD------RDYAVKPMNCPAHIQIYNQGLKSYRNLPLRLAE 354

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNEPSG+LHG+MRVR F QDD H+FCT EQ+ +E     +L  ++YK FGFEKI 
Sbjct: 355 FGSCHRNEPSGTLHGIMRVRNFVQDDGHIFCTPEQIQDEVSTFIDLTFNVYKYFGFEKIN 414

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +KLSTRP+KRVGSD +WD +E  +   L+  KN     I   +  GEGAFYGPK E+ILK
Sbjct: 415 IKLSTRPKKRVGSDEVWDKSEIALVEALNA-KN-----IVWELQEGEGAFYGPKIEFILK 468

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D + R WQCGT+QVDF++P R  A +++ +S K  PV++HRA+ GS+ERF+GI+IE+++G
Sbjct: 469 DCLDRQWQCGTLQVDFSMPKRLGAQFIDENSVKKTPVILHRAIMGSLERFLGILIEHYEG 528

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P WLSPIQA++  I+    ++  +I   LK   L + +D RNE +++KIREHS+++ P
Sbjct: 529 AYPCWLSPIQAVIINISEKHAKFIVDIVKKLKKQGLRVISDLRNEKVSFKIREHSLQRYP 588

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
            I++ GD+E  +  + +R+ G      +S+   I  + +E+L
Sbjct: 589 YILVVGDREMEKGQVSVRQRGGKDLGAMSVGTFIKKVNQETL 630


>gi|161503559|ref|YP_001570671.1| threonyl-tRNA synthetase [Salmonella enterica subsp. arizonae
           serovar 62:z4,z23:-- str. RSK2980]
 gi|160864906|gb|ABX21529.1| hypothetical protein SARI_01637 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 622

 Score =  629 bits (1623), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 290/601 (48%), Positives = 413/601 (68%), Gaps = 16/601 (2%)

Query: 25  DVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAE 83
           DVA  I   LAK  +A  +NG++ D SD +  + ++ IIT +D   L +IRHSCAH++  
Sbjct: 2   DVALDIGPGLAKATIAGRVNGELVDASDLIENDATLSIITAKDEEGLEIIRHSCAHLLGH 61

Query: 84  AVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSH 143
           A++ +WP  ++AIGP++++GFYYD D ++  + +++  +EK+M E+  +D   +K+ +S 
Sbjct: 62  AIKQLWPHTKMAIGPVVDNGFYYDVDLDRTLTQEDVEALEKRMHELAEKDYDVIKKKVSW 121

Query: 144 EKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMK 202
             ARE F  + E YKV IL E+I   +   LY   E+ D+CRGPHV +  +    FKLMK
Sbjct: 122 HDARETFVKRGETYKVAILDENIAHDDKPGLYHHEEYVDMCRGPHVPNM-RFCHHFKLMK 180

Query: 203 VAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDG 262
            AGAYWRGDSN  ML RIYGTAW  ++ L  YL  LEE+ KRDHRK+ +++DL+H+ E+ 
Sbjct: 181 TAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEA 240

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
            G++FWH  GW IF+ L  ++R K+K+  Y+E+  P ++D+ LW+++GHWD+Y+  MF  
Sbjct: 241 PGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFT- 299

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
                T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+AEFGS +RNEPSG+LHGLM
Sbjct: 300 -----TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGLM 354

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALW 441
           RVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  FGFEKI+VKLSTRP+KR+GSD +W
Sbjct: 355 RVRGFTQDDAHIFCTEEQIRDEVNACIRMVYDMYSTFGFEKIVVKLSTRPDKRIGSDEMW 414

Query: 442 DDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFN 501
           D AE  +   L+      ++ I     LGEGAFYGPK E+ L D + R WQCGT+Q+DF+
Sbjct: 415 DRAEADLAVALE------ENNIPFEYQLGEGAFYGPKIEFTLYDCLDRAWQCGTVQLDFS 468

Query: 502 LPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT 561
           LPSR +A YV   +E+  PVMIHRA+ GS+ERFIGI+ E F G  P WL+P+Q +V  IT
Sbjct: 469 LPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVVMNIT 528

Query: 562 SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
            S  EY  E+   L++  + ++ D RNE I +KIREH+++++P +++CGDKE     + +
Sbjct: 529 DSQSEYVNELTQKLQNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAV 588

Query: 622 R 622
           R
Sbjct: 589 R 589


>gi|325578419|ref|ZP_08148554.1| threonine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
 gi|325160155|gb|EGC72284.1| threonine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
          Length = 643

 Score =  629 bits (1623), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 292/619 (47%), Positives = 420/619 (67%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPE 65
           +T PDGS + F    +  +VA+ I   LAK  +A  +NG   D  D + E  ++EIIT +
Sbjct: 4   ITLPDGSKREFDRPVSVLEVAQDIGAGLAKATIAGRVNGVRHDACDIINEDANLEIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ ++P+V++AIGP IE+GFYYD D ++  + +++  IEK+
Sbjct: 64  DEDGLEIIRHSCAHLLGHAIKQLFPDVKMAIGPTIENGFYYDVDLDRSLTQEDIDAIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K  +S ++AR+ FE + E YK+ IL E+I       LY   E+ D+CR
Sbjct: 124 MLELAKTNYDVIKTPVSWQEARDTFEKRGEPYKMAILDENIERTATPALYHHEEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKLMKVAGAYWRGDS   ML RIYGTAW  +++L +YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHNFKLMKVAGAYWRGDSKNKMLQRIYGTAWADKKQLAEYLTRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ + +DL+H+ E+  G++FWH  GW IF+ L +++R K+K+ DY+E+  P ++D+ 
Sbjct: 243 DHRKIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW +Y   MF  +  +      R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWQNYGDLMFTTQSEN------REYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+ +E      ++  IY  FGF+ I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQIESEVTSCIKMVYDIYSTFGFQNI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPEKR+G+D +WD      +         + + +   +  GEGAFYGPK E+ L
Sbjct: 417 QVKLSTRPEKRIGADDMWD------RAEAGLAAALAHNGLEYEIQAGEGAFYGPKIEFAL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D + R+WQCGTIQ+DF LP R NA YV   +++  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 RDCLDREWQCGTIQLDFALPGRLNASYVAEDNDRRTPVMIHRAILGSIERFIGIITEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+QA+V  IT S  +Y Q++   L    L ++ D RNE + +KIREH+++++
Sbjct: 531 GFFPAWLAPVQAVVMNITDSQADYVQKVVKQLSDAGLRVKADLRNEKVGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++CGDKE +E  + +R
Sbjct: 591 PYMLVCGDKEIAEGKVAVR 609


>gi|238791701|ref|ZP_04635338.1| Threonyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
 gi|238728805|gb|EEQ20322.1| Threonyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
          Length = 642

 Score =  629 bits (1623), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 288/619 (46%), Positives = 424/619 (68%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS ++F    +  DVA  I   LAK  +A  +NG++ D SD +  +  + IIT +
Sbjct: 4   ITLPDGSQRHFDHAVSALDVALDIGPGLAKACIAGRVNGELVDASDLIESDAQLAIITTK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L ++RHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D ++  + ++L  +EK+
Sbjct: 64  DAEGLEILRHSCAHLLGHAIKQLWPDTKMAIGPVIDNGFYYDVDIDRTLTQEDLDLLEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+  +D   +K+ +S ++AR+ F ++ E YKV IL E+I   +   LY   E+ D+CR
Sbjct: 124 MHELADKDYDVIKKKVSWQEARDTFAARGEDYKVAILDENISHDDRPGLYHHEEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKL K +GAYWRGDS   ML RIYGTAW  +++L  YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLQKTSGAYWRGDSKNKMLQRIYGTAWGDKKQLNAYLQRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF+ L +++R K+K+  Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKEYQYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW++Y  +MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWENYAEHMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  FGFEKI
Sbjct: 357 EFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQVRDEVNSCIKMVYDMYSTFGFEKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+GSD LW  AE+ +   L      +++ I      GEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEKRIGSDDLWTRAEDDLAAAL------TENDIPFEYQPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF+LP R +A Y+  ++++  PVMIHRA+ GS+ERFIGI+ E + 
Sbjct: 471 HDCLDRAWQCGTVQLDFSLPGRLSASYIGENNDRQVPVMIHRAILGSMERFIGILTEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+Q +V  IT S  +Y Q++   L+   +  + D RNE I +KIREH+++++
Sbjct: 531 GFFPTWLAPVQVVVMNITDSQSDYVQQVTKKLQDAGIRAKADLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++CGDKE     I +R
Sbjct: 591 PYMLVCGDKEVESGKIAVR 609


>gi|241668765|ref|ZP_04756343.1| threonyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254877296|ref|ZP_05250006.1| threonine-tRNA ligase [Francisella philomiragia subsp. philomiragia
           ATCC 25015]
 gi|254843317|gb|EET21731.1| threonine-tRNA ligase [Francisella philomiragia subsp. philomiragia
           ATCC 25015]
          Length = 635

 Score =  629 bits (1623), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 299/642 (46%), Positives = 422/642 (65%), Gaps = 15/642 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           I + FPDGSI+ F        +A+SIS SLAK  V   I+ K+ D  D +  +  + +IT
Sbjct: 2   INIKFPDGSIREFESGVNSLQIAKSISPSLAKITVGAYIDNKLSDAKDVINHDCELRLIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   L ++RHSCAH++A AV+ ++P  +V IGP+I++GFYYDF  ++     +LA IE
Sbjct: 62  TKDTEGLEILRHSCAHLLANAVKELYPNTEVTIGPVIDNGFYYDFSFKETIGEADLANIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M+EI  +      + +S E A   F+++ E YKV+I+ESIPA + + +Y QG++ DLC
Sbjct: 122 KRMKEIAKKGISISYRVVSKEDAIAFFKAQGENYKVDIIESIPADQQIKIYTQGDFSDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV ST  +K F KL K+AGAYWRGDSN  ML+RIYGT W T+++L QYL+ LEE+EK
Sbjct: 182 RGPHVPSTAAIKAF-KLTKLAGAYWRGDSNNEMLTRIYGTCWATKEDLDQYLHMLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRK+ + +DLFH  ED  G+ FWH  G +I++ +  YMR   K     EI TP + D 
Sbjct: 241 RDHRKIGKALDLFHFQEDSPGIAFWHDSGVRIWREVEDYMRASNKKYGCGEIRTPLIADF 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGH   Y  NMFA K  +      R FA++PMNCP  V V+N  L SYR+LP+R+
Sbjct: 301 SLWEKSGHASKYAENMFATKSEN------RDFAIRPMNCPTCVQVYNTKLHSYRDLPIRM 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFG V+RNEPSGSLHGLMRVR FTQDD H+FC  EQ+  E + +      +YKDFGF  
Sbjct: 355 AEFGIVHRNEPSGSLHGLMRVRSFTQDDGHIFCAPEQVEEEVILMVKQCFEVYKDFGFND 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             VK++ RPE R+G+D  WD +E ++K  LD       + +   +L GEGAFYGPK E+ 
Sbjct: 415 FTVKIALRPENRIGNDETWDKSEQMLKNALDA------NNVAYELLPGEGAFYGPKIEFH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LKDAIGR WQCGTIQ+DF++P R  A Y++ +  K  PVM+HRA+ GS+ERFIG++IE++
Sbjct: 469 LKDAIGRSWQCGTIQLDFSMPDRLGATYIDKNGNKQVPVMLHRAIVGSLERFIGMLIEHY 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            GN+PLWL+P+Q  V  I++   EY Q++   L+ + +  + D RNE I +KIREH++ +
Sbjct: 529 AGNMPLWLTPVQVAVMGISNHQDEYCQKVFETLEKNGIRAKLDLRNEKIGFKIREHTLLR 588

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P ++I G  E  +  + +R+       ++S+ D    L ++
Sbjct: 589 VPYLVILGKSEQEQEIVTVRKHNGEDLGQMSIGDFCAFLNEQ 630


>gi|326623540|gb|EGE29885.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Dublin str. 3246]
          Length = 622

 Score =  629 bits (1623), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 293/623 (47%), Positives = 420/623 (67%), Gaps = 16/623 (2%)

Query: 25  DVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAE 83
           DVA  I   LAK  +A  +NG++ D SD +  + ++ IIT +D   L +IRHSCAH++  
Sbjct: 2   DVALDIGPGLAKATIAGRVNGELVDASDLIENDATLAIITAKDEEGLEIIRHSCAHLLGH 61

Query: 84  AVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSH 143
           A++ +WP  ++AIGP++++GFYYD D ++  + +++  +EK+M E+  ++   +K+ +S 
Sbjct: 62  AIKQLWPHTKMAIGPVVDNGFYYDVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVSW 121

Query: 144 EKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMK 202
             ARE F  + E YKV IL E+I   +   LY   E+ D+CRGPHV +  +    FKLMK
Sbjct: 122 HDARETFVKRGETYKVAILDENIAHDDKPGLYHHEEYVDMCRGPHVPNM-RFCHHFKLMK 180

Query: 203 VAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDG 262
            AGAYWRGDSN  ML RIYGTAW  ++ L  YL  LEE+ KRDHRK+ +++DL+H+ E+ 
Sbjct: 181 TAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEA 240

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
            G++FWH  GW IF+ L  ++R K+K+  Y+E+  P ++D+ LW+++GHWD+Y+  MF  
Sbjct: 241 PGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFT- 299

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
                T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+AEFGS +RNEPSG+LHGLM
Sbjct: 300 -----TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGLM 354

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALW 441
           RVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  FGFEKI+VKLSTRP+KR+GSD +W
Sbjct: 355 RVRGFTQDDAHIFCTEEQIRDEVNACIRMVYDMYSTFGFEKIVVKLSTRPDKRIGSDEMW 414

Query: 442 DDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFN 501
           D AE  +   L+      ++ I     LGEGAFYGPK E+ L D + R WQCGT+Q+DF+
Sbjct: 415 DRAEADLAVALE------ENNIPFEYQLGEGAFYGPKIEFTLYDCLDRAWQCGTVQLDFS 468

Query: 502 LPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT 561
           LPSR +A YV   +E+  PVMIHRA+ GS+ERFIGI+ E F G  P WL+P+Q +V  IT
Sbjct: 469 LPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVVMNIT 528

Query: 562 SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
            S  EY  E+   L++  + ++ D RNE I +KIREH+++++P +++CGDKE     + +
Sbjct: 529 DSQSEYVNELTQKLQNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAV 588

Query: 622 RRFGSTTTQKVSLLDAIPILTKE 644
           R         + + D I  L +E
Sbjct: 589 RTRRGKDLGSLDVNDVIEKLQQE 611


>gi|291327048|ref|ZP_06126787.2| threonine--tRNA ligase [Providencia rettgeri DSM 1131]
 gi|291311980|gb|EFE52433.1| threonine--tRNA ligase [Providencia rettgeri DSM 1131]
          Length = 653

 Score =  629 bits (1623), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 299/640 (46%), Positives = 425/640 (66%), Gaps = 19/640 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  DVA  I   LAK  +A  ING+  D  + +  + ++ IIT +
Sbjct: 15  ITLPDGSQRQFDHPVSVMDVARDIGAGLAKACIAGRINGERVDACEIIEHDANVSIITSK 74

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ +WP  ++AIGP I++GFYYD D +   + ++L ++EK+
Sbjct: 75  DEDGLEIIRHSCAHLLGHAIKQLWPNTKMAIGPTIDNGFYYDVDLDHMLTQEDLEKLEKR 134

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   D   +K+ +S  +ARE F ++ E YKVEIL ++I   +   LY   E+ D+CR
Sbjct: 135 MLELAKTDYDVVKKRVSWSEARETFVARGEDYKVEILDQNISQDDRPGLYHHEEYVDMCR 194

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKL KVAGAYWRG+S+  ML RIYGTAW  +++L  YL  LEE+ KR
Sbjct: 195 GPHVPNM-RFCHHFKLQKVAGAYWRGNSDNKMLQRIYGTAWADKKQLAAYLLRLEEAAKR 253

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G+ FWH  GW IF+ L +++R K+K  +Y+E+  P ++D+ 
Sbjct: 254 DHRKIGKQLDLYHMQEEAPGMAFWHNDGWTIFRELETFVRTKLKAYNYQEVKGPFMMDRV 313

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHWD+Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 314 LWEKTGHWDNYKDAMFT------TSSENREYCVKPMNCPGHVQIFNQGLKSYRDLPLRMA 367

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT+EQ+ +E      +I  +Y  FGFEKI
Sbjct: 368 EFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQILSEVTSCIEMIYDVYATFGFEKI 427

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+G+D +WD AE  +   L +        I      GEGAFYGPK E+ L
Sbjct: 428 VVKLSTRPEKRIGTDEMWDRAEEDLANALKS------KGIEFEYQPGEGAFYGPKIEFTL 481

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF LP R  A YV  ++E+  PVMIHRAV GS+ERFIGI+ E + 
Sbjct: 482 YDCLDRAWQCGTVQLDFFLPGRLTASYVGENNERIVPVMIHRAVLGSLERFIGILTEEYA 541

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P Q +V  IT S  +Y QE+ + L+S  +  + D RNE I +KIREH+++++
Sbjct: 542 GFFPTWLAPQQVVVMNITDSQADYVQELVSKLQSVGIRAKADLRNEKIGFKIREHTLRRV 601

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           P +++CGDKE     + +R   +   + +  LD    +TK
Sbjct: 602 PYMLVCGDKEVESGKVAVR---TRRGKDLGSLDVNEFMTK 638


>gi|145636075|ref|ZP_01791745.1| threonyl-tRNA synthetase [Haemophilus influenzae PittHH]
 gi|229844174|ref|ZP_04464315.1| threonyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
 gi|145270597|gb|EDK10530.1| threonyl-tRNA synthetase [Haemophilus influenzae PittHH]
 gi|229813168|gb|EEP48856.1| threonyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
          Length = 643

 Score =  629 bits (1623), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 290/619 (46%), Positives = 421/619 (68%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS + F    +  +VA+ I   LAK  +A  +NG+  D  D + ++ ++EIIT +
Sbjct: 4   ITLPDGSQRQFDRPVSVLEVAQDIGAGLAKATIAGRVNGERRDACDVIEQDATLEIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ ++P+V++AIGP IE+GFYYD D ++  + +++  IEK+
Sbjct: 64  DEDGLEIIRHSCAHLLGHAIKQLFPDVKMAIGPTIENGFYYDVDLDRSLTQEDIDAIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K+ ++ ++AR+ FE + E YK+ IL E+I       LY   E+ D+CR
Sbjct: 124 MLELAKTNYDVVKKRVTWQEARDTFEKRGEPYKMAILDENIERTATPALYHHLEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +  + FKL KVAGAYWRGDS   ML RIYGTAW  +++L +YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCQHFKLQKVAGAYWRGDSKNKMLQRIYGTAWADKKQLAEYLTRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ + +DL+H+ E+  G++FWH  GW IF+ L +++R K+K  DY+E+  P ++D+ 
Sbjct: 243 DHRKIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW +Y   MF  +  +      R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWQNYADLMFTTQSEN------REYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+ +E      ++  IY  FGF  I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQIESEVTSCIKMVYDIYSTFGFTNI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPE R+GSD +WD      +         + + +   +  GEGAFYGPK E+ L
Sbjct: 417 AVKLSTRPENRIGSDEMWD------RAEAGLAAALAHNGLEYEIQEGEGAFYGPKIEFAL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D +GR+WQCGT+Q+DF LP R +A YV   + +  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 RDCLGREWQCGTVQLDFALPGRLDATYVAEDNSRKTPVMIHRAILGSIERFIGIITEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P QA+V  IT S  +Y Q++A  L    L ++TD RNE + +KIREH+++++
Sbjct: 531 GFFPAWLAPTQAVVMNITDSQADYVQKVAKQLSDVGLRVKTDLRNEKVGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++CGDKE +E  + +R
Sbjct: 591 PYMLVCGDKEIAEGKVAVR 609


>gi|332187352|ref|ZP_08389090.1| threonyl-tRNA synthetase [Sphingomonas sp. S17]
 gi|332012513|gb|EGI54580.1| threonyl-tRNA synthetase [Sphingomonas sp. S17]
          Length = 664

 Score =  629 bits (1623), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 303/662 (45%), Positives = 437/662 (66%), Gaps = 19/662 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
            ++T PDGS++      T +D+A +I   LAK A+A  ++G++ D+  P   + ++ ++T
Sbjct: 2   FRITLPDGSVREVAPGTTPADIAAAIGSGLAKAAIAARVDGELRDIMRPFEGDAALALVT 61

Query: 64  PED-PRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF-DKEQPFSSDELAQ 121
            +D   +L + RH  AH++AEAVQ+++P  Q+  GP+ +DGFYYDF  K++PF+ ++L  
Sbjct: 62  AKDEADALELARHDYAHVLAEAVQALFPGTQITFGPVTDDGFYYDFAPKDRPFTEEDLPA 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE--- 178
           IE +M++IIA+D P +++  + E+  E ++++ E++K E    +P  E +T+YR G+   
Sbjct: 122 IEAEMRKIIAKDEPLIREVWTREQLIERWKAQGESFKAEWAAELPDDEELTVYRAGKGED 181

Query: 179 -WFDLCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
            W D+CRGPH+ STG++    FKL +V+GAYWRGD    MLSRIYGT W  +++L ++L 
Sbjct: 182 AWLDMCRGPHLASTGKLDPNAFKLTRVSGAYWRGDQKNAMLSRIYGTGWLNKKQLAEHLT 241

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEIN 295
            LEE+ KRDHRKL  EMDLFH+ ++  G +FWH KG++I++ L +YMRR I    Y E+ 
Sbjct: 242 RLEEAAKRDHRKLGNEMDLFHLQQEAHGSVFWHPKGYRIWRELEAYMRRAIDATGYREVK 301

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAV-----KCADD---TIKDLRTFALKPMNCPGHVAV 347
           TPQV+D   W+QSGHW  YR NMF +        D+      D +  ALKPMNCP HV +
Sbjct: 302 TPQVMDARQWEQSGHWGKYRENMFVIPDEVPNTEDEGPLVSDDAQWMALKPMNCPAHVLI 361

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
           F  G+KSYR+LP+R  E G  +RNEP G+LHGLMRVR FTQDDAH+FC ++Q+  E    
Sbjct: 362 FRQGIKSYRDLPLRFYENGCCHRNEPHGALHGLMRVRQFTQDDAHIFCREDQIVEEVRAF 421

Query: 408 HNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGV 467
             L   IYKDFGF    +KL+ RPEKR G++ +WD AE  ++  +      + ++     
Sbjct: 422 CELADRIYKDFGF-TYSIKLALRPEKRFGTEEMWDQAEEELRNAV-VAAGLATEQYGWEE 479

Query: 468 LLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAV 527
           L GEGAFY PK E+ L DAIGR WQ GTIQ D  LP R +A Y+    E+  P+M+HRA+
Sbjct: 480 LPGEGAFYAPKLEWHLTDAIGRTWQVGTIQSDRVLPERLDASYIGEDGERHRPIMLHRAI 539

Query: 528 FGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR 587
           FGS ERFIGI+IE++ G  P+WL+P+QA+V TI S A  YA+E A  L +  + +ETD R
Sbjct: 540 FGSYERFIGILIEHYAGRFPVWLAPVQAVVATIVSDADGYAEEAAAKLAAAGIRVETDLR 599

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLP 647
           NE INYK+REHS+ K+P++++ G +EA E  + +RR GS   + ++L +AI  L  E+ P
Sbjct: 600 NEKINYKVREHSVAKVPVLLVVGKREAEEGKVAVRRLGSQAQEVMTLDEAIATLRGEATP 659

Query: 648 PD 649
           PD
Sbjct: 660 PD 661


>gi|53728893|ref|ZP_00134603.2| COG0441: Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|126207707|ref|YP_001052932.1| threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae L20]
 gi|166223315|sp|A3MYU1|SYT_ACTP2 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|126096499|gb|ABN73327.1| threonyl-tRNA synthetase ThrS [Actinobacillus pleuropneumoniae
           serovar 5b str. L20]
          Length = 643

 Score =  629 bits (1623), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 291/619 (47%), Positives = 421/619 (68%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPE 65
           +T PDGS + F    +  +VA+SI   LAK  +A  +NG+  D  D + E  S+EIIT +
Sbjct: 4   ITLPDGSQRQFDNPVSVMEVAQSIGAGLAKATIAGRVNGERRDACDIISEDSSLEIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ ++P V++AIGP I++GFYYD D ++  + ++L  IEK+
Sbjct: 64  DEDGLEIIRHSCAHLLGHAIKQLFPNVKMAIGPTIDNGFYYDVDLDRSLTQEDLDAIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K+ +S ++AR+ FE + E YK+ IL E+I       LY   E+ D+CR
Sbjct: 124 MLELAKTNYDVVKKRVSWQEARDTFEKRGEPYKMAILDENIERTATPALYHHEEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKL KVAGAYWRGDS   ML RIYGTAW  +++L +YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLQKVAGAYWRGDSKNKMLQRIYGTAWADKKQLAEYLTRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHR++ + +DL+H+ E+  G++FWH  GW IF+ L +++R K+K+ DY+E+  P ++D+ 
Sbjct: 243 DHRRIGKALDLYHMQEEAPGLVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW +Y   MF  +  +      R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWERTGHWQNYADLMFTTQSEN------REYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+ +E      ++  IY  FGF  I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQIESEVTSCIRMVYDIYSTFGFSNI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPE R+G DA+WD AE+ +   L      + + ++  +  GEGAFYGPK E+ L
Sbjct: 417 QVKLSTRPENRIGDDAMWDRAEDGLAKAL------TANGLSYEIQEGEGAFYGPKIEFAL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D + R+WQCGTIQ+DF LP R +A YV   + +  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 RDCLDREWQCGTIQLDFALPGRLDASYVAEDNGRRTPVMIHRAILGSIERFIGIITEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P QA+V  IT S  +Y Q++   L    + +++D RNE + +K+REH+++++
Sbjct: 531 GFFPTWLAPTQAVVMNITDSQADYVQKVTKALSDAGIRVKSDLRNEKVGFKVREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++CGDKE     + +R
Sbjct: 591 PYMLVCGDKEIEAGKVSVR 609


>gi|152970729|ref|YP_001335838.1| threonyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
           MGH 78578]
 gi|330009686|ref|ZP_08306560.1| threonine--tRNA ligase [Klebsiella sp. MS 92-3]
 gi|150955578|gb|ABR77608.1| threonyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
           MGH 78578]
 gi|328534774|gb|EGF61330.1| threonine--tRNA ligase [Klebsiella sp. MS 92-3]
          Length = 622

 Score =  629 bits (1623), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 287/601 (47%), Positives = 414/601 (68%), Gaps = 16/601 (2%)

Query: 25  DVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAE 83
           DVA  I   LAK  +A  +NG++ D  DP+  + ++ IIT +D   L +IRHSCAH++  
Sbjct: 2   DVALDIGPGLAKATIAGRVNGELVDACDPIESDSTLSIITAKDEEGLEIIRHSCAHLLGH 61

Query: 84  AVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSH 143
           A++ +WP  ++AIGP++++GFYYD D +   + +++  +EK+M E+  ++   +K+ +S 
Sbjct: 62  AIKQLWPNTKMAIGPVVDNGFYYDVDLDHTLTQEDIDALEKRMHELAEKNYDVIKKKVSW 121

Query: 144 EKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMK 202
            +ARE F  + E+YKV IL E+I   +   LY   E+ D+CRGPHV +  +    FKLMK
Sbjct: 122 HEARETFVKRGESYKVSILDENIAHDDKPGLYHHEEYIDMCRGPHVPNM-RFCHHFKLMK 180

Query: 203 VAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDG 262
            AGAYWRGDSN  ML RIYGTAW  ++ L  YL  LEE+ KRDHRK+ +++DL+H+ E+ 
Sbjct: 181 TAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEA 240

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
            G++FWH  GW IF+ L +++R K+K+  Y+E+  P ++D+ LW+++GHWD+Y+  MF  
Sbjct: 241 PGMVFWHNDGWTIFRELETFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFT- 299

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
                T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+AEFGS +RNEPSG+LHGLM
Sbjct: 300 -----TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGLM 354

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALW 441
           RVRGFTQDDAH+FCT++Q+ +E      ++  +Y  FGFEKI+VKLSTRPEKR+GSD  W
Sbjct: 355 RVRGFTQDDAHIFCTEDQVRDEVNACIRMVYDMYSTFGFEKIVVKLSTRPEKRIGSDETW 414

Query: 442 DDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFN 501
           D AE  +   L+      ++ I     LGEGAFYGPK E+ L D + R WQCGT+Q+DF+
Sbjct: 415 DRAEADLAVALE------ENNIPFEYQLGEGAFYGPKIEFTLYDCLDRAWQCGTVQLDFS 468

Query: 502 LPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT 561
           LP R +A YV  ++E+  PVMIHRA+ GS+ERFIGI+ E F G  P W++P+Q +V  IT
Sbjct: 469 LPQRLSASYVGENNERQVPVMIHRAILGSLERFIGILTEEFAGFFPTWIAPVQVVVMNIT 528

Query: 562 SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
            S  EY  E+   L++  + ++ D RNE I +KIREH+++++P +++CGDKE     + +
Sbjct: 529 DSQAEYVNELTRKLQNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAV 588

Query: 622 R 622
           R
Sbjct: 589 R 589


>gi|238898885|ref|YP_002924567.1| threonine tRNA synthetase [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
 gi|259516538|sp|C4K776|SYT_HAMD5 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|229466645|gb|ACQ68419.1| threonine tRNA synthetase [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
          Length = 638

 Score =  629 bits (1622), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 290/619 (46%), Positives = 420/619 (67%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS +++    +  DVA  I   LAK  +A   N ++ D  D +  +G ++IITP 
Sbjct: 4   ITLPDGSTRHYEQSLSVLDVALDIHPRLAKSCIAGRFNDQLIDACDLLSVDGKLQIITPS 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D  ++ +IRHSCAH++  AV+ +WPE ++AIGP+IE+GFYYD D E P + ++L  +EK+
Sbjct: 64  DGEAVEIIRHSCAHLLGHAVKQLWPETKMAIGPVIENGFYYDLDIESPLTQEDLELLEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+  ++   +K+ +S +KAR+ F  + E+YK+ IL E+I + +   LY   E+ D+CR
Sbjct: 124 MHELAHKNYTVIKKKVSWQKARDTFSKRGESYKIAILDENIDSSDQPNLYFHEEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +      +FKL K +GAYWRGDS    L R+YGTAW+ +++L  YL  LEE+ KR
Sbjct: 184 GPHVPNMS-FCHYFKLQKTSGAYWRGDSKNKTLQRVYGTAWSDKKQLDAYLNRLEEATKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +  DL+H  E+  G++FWH  GW +F+ L   +R K+K+ +Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKTQDLYHFQEEAPGMVFWHENGWIVFRELEILIREKLKEYEYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW++Y  NMF       T+ + R + +KPMNCPGH+ +F  GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWENYSENMFT------TLSENREYCIKPMNCPGHLEIFKQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT++Q+  E      +   IY+ FGF+KI
Sbjct: 357 EFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEKQVRKEVSNCIKMTYDIYQTFGFKKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPEKR+GSD +W  AE  +  VL       +  I   +  GEGAFYGPK E+ L
Sbjct: 417 AVKLSTRPEKRIGSDEIWTQAEEDLASVL------KEQGITFELQPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF+LP R NAFY++ +SE+  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 YDCLDRAWQCGTVQLDFSLPVRLNAFYIDENSERQVPVMIHRAILGSIERFIGILTEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P+WL+P+Q ++  IT    +Y +++A  L+   +  + D RNE I +KIR+H++ +I
Sbjct: 531 GFFPVWLAPVQVMLINITEKQSDYVKKVAKNLQQLGVRAKVDLRNEKIGFKIRQHTLYRI 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P I++CGDKE     I +R
Sbjct: 591 PYILVCGDKEVESNQIAVR 609


>gi|188025947|ref|ZP_02960307.2| hypothetical protein PROSTU_02247 [Providencia stuartii ATCC 25827]
 gi|188021023|gb|EDU59063.1| hypothetical protein PROSTU_02247 [Providencia stuartii ATCC 25827]
          Length = 653

 Score =  629 bits (1622), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 292/619 (47%), Positives = 419/619 (67%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  DVA  I   LAK  +A  +NG++ D  + +  + ++ IIT +
Sbjct: 15  ITLPDGSQRQFDHAVSVMDVARDIGAGLAKACIAGRVNGELVDACELIEHDANLAIITSK 74

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ +WP  ++AIGP+I++GFYYD D +   + ++L ++EK+
Sbjct: 75  DDEGLEIIRHSCAHLLGHAIKQLWPNTKMAIGPVIDNGFYYDIDLDYALTQEDLEKLEKR 134

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   D   +K+ +S  +ARE F ++ E YKVEIL ++I   +   LY   E+ D+CR
Sbjct: 135 MLELAKTDYDVIKKRVSWAEARETFVARGEDYKVEILDQNISQDDRPGLYHHQEYIDMCR 194

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKL KVAGAYWRG+S+  ML RIYGTAW  +++L  YL  LEE+ KR
Sbjct: 195 GPHVPNM-RFCHHFKLQKVAGAYWRGNSDNKMLQRIYGTAWADKKQLNAYLLRLEEAAKR 253

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G+ FWH  GW IF+ L +++R K+K  +Y+E+  P ++D+ 
Sbjct: 254 DHRKIGKQLDLYHMQEEAPGMAFWHNDGWTIFRELETFVRTKLKAYNYQEVKGPFMMDRV 313

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW++Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 314 LWERTGHWENYKDAMFT------TSSENREYCVKPMNCPGHVQIFNQGLKSYRDLPLRMA 367

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT++Q+ +E      +I  +Y  FGFEKI
Sbjct: 368 EFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEDQILSEVTDCIKMIYDVYATFGFEKI 427

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+G+D +WD AE       D  +      I      GEGAFYGPK E+ L
Sbjct: 428 VVKLSTRPEKRIGTDDMWDTAE------ADLAQALKDQGIEFEYQPGEGAFYGPKIEFTL 481

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF LP R NA YV  ++E+  PVMIHRAV GS+ERFIGI+ E + 
Sbjct: 482 YDCLDRAWQCGTVQLDFFLPGRLNASYVGENNERIVPVMIHRAVLGSLERFIGILTEEYA 541

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P Q +V  IT +  +Y QE+ + L+S  +  + D RNE I +KIREH+++++
Sbjct: 542 GFFPTWLAPQQVVVMNITDTQADYVQELVSKLQSVGIRAKADLRNEKIGFKIREHTLRRV 601

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++CGDKE     + +R
Sbjct: 602 PYMLVCGDKEVESGKVSVR 620


>gi|145629552|ref|ZP_01785350.1| threonyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
 gi|145632888|ref|ZP_01788621.1| threonyl-tRNA synthetase [Haemophilus influenzae 3655]
 gi|145639038|ref|ZP_01794646.1| threonyl-tRNA synthetase [Haemophilus influenzae PittII]
 gi|145641382|ref|ZP_01796961.1| threonyl-tRNA synthetase [Haemophilus influenzae R3021]
 gi|144978395|gb|EDJ88159.1| threonyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
 gi|144986544|gb|EDJ93110.1| threonyl-tRNA synthetase [Haemophilus influenzae 3655]
 gi|145272010|gb|EDK11919.1| threonyl-tRNA synthetase [Haemophilus influenzae PittII]
 gi|145273925|gb|EDK13792.1| threonyl-tRNA synthetase [Haemophilus influenzae 22.4-21]
 gi|309750996|gb|ADO80980.1| Threonyl-tRNA synthetase [Haemophilus influenzae R2866]
          Length = 643

 Score =  629 bits (1622), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 290/619 (46%), Positives = 421/619 (68%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS + F    +  +VA+ I   LAK  +A  +NG+  D  D + ++ ++EIIT +
Sbjct: 4   ITLPDGSQRQFDRPVSVLEVAQDIGAGLAKATIAGRVNGERRDACDVIEQDATLEIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ ++P+V++AIGP IE+GFYYD D ++  + +++  IEK+
Sbjct: 64  DEDGLEIIRHSCAHLLGHAIKQLFPDVKMAIGPTIENGFYYDVDLDRSLTQEDIDAIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K+ ++ ++AR+ FE + E YK+ IL E+I       LY   E+ D+CR
Sbjct: 124 MLELAKTNYDVVKKRVTWQEARDTFEKRGEPYKMAILDENIERTATPALYHHLEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +  + FKL KVAGAYWRGDS   ML RIYGTAW  +++L +YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCQHFKLQKVAGAYWRGDSKNKMLQRIYGTAWADKKQLAEYLTRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ + +DL+H+ E+  G++FWH  GW IF+ L +++R K+K  DY+E+  P ++D+ 
Sbjct: 243 DHRKIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW +Y   MF  +  +      R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWQNYADLMFTTQSEN------REYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+ +E      ++  IY  FGF  I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQIESEVTSCIKMVYDIYSTFGFTNI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPE R+GSD +WD      +         + + +   +  GEGAFYGPK E+ L
Sbjct: 417 AVKLSTRPENRIGSDEMWD------RAEAGLAAALAHNGLEYEIQEGEGAFYGPKIEFAL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D +GR+WQCGT+Q+DF LP R +A YV   + +  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 RDCLGREWQCGTVQLDFALPGRLDATYVAEDNSRKTPVMIHRAILGSIERFIGIITEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P QA+V  IT S  +Y Q++A  L    L ++TD RNE + +KIREH+++++
Sbjct: 531 GFFPAWLAPTQAVVMNITDSQADYVQKVAKQLSDVGLRVKTDLRNEKVGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++CGDKE +E  + +R
Sbjct: 591 PYMLVCGDKEIAEGKVAVR 609


>gi|332993607|gb|AEF03662.1| threonyl-tRNA synthetase [Alteromonas sp. SN2]
          Length = 638

 Score =  629 bits (1622), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 296/641 (46%), Positives = 419/641 (65%), Gaps = 16/641 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  DVA  I   LAK  +A  +NG++ D  D +  +  ++IIT +
Sbjct: 4   ITLPDGSQRAFDQSVSVLDVANDIGPGLAKATIAGKVNGELVDAVDLIESDAQLQIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L ++RHSCAH++  A++ +WP  ++AIGP I++GFYYD D E+  + +++ ++EK+
Sbjct: 64  DEAGLEILRHSCAHLLGHAIKQLWPNTKMAIGPTIDNGFYYDVDMEESLTQEDIQKLEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M ++   +   +K  +S ++AR+ FE++ E YK+EIL E+I   +   LY   E+ D+CR
Sbjct: 124 MLQLAKTNYNVVKNKVSWQEARDAFEARGETYKMEILDENISHDDRPGLYHHEEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +  + FKLMKVAGAYWRGDS+  ML RIYGTAW  +++L  YL  LEE+EKR
Sbjct: 184 GPHVPNM-KFCQNFKLMKVAGAYWRGDSDNKMLQRIYGTAWADKKQLKAYLQRLEEAEKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ + ++LFH  E+  G++FWH  GW I+  L  ++R K++D  Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKALNLFHWQEEAPGMVFWHNDGWSIYTELEKFVREKLRDYTYDEVKGPLMMDRS 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SGHW+ Y  NMF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKSGHWEKYAENMFT------TESEKREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFG  +RNEPSG+LHGLMRVRGFTQDDAH+FCT+EQ+  E      ++   Y  FGF+K+
Sbjct: 357 EFGCCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQILEEVSGCIKMVYETYAAFGFDKV 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPEKRVGSD +WD      K      +    + I      GEGAFYGPK E+ L
Sbjct: 417 AVKLSTRPEKRVGSDEIWD------KSEAALAEALKANDIEFEYQPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF++P R  + YV    E+  PVMIHRA+ GS+ERFIGI+ E F 
Sbjct: 471 HDCLNRAWQCGTVQLDFSMPGRLGSTYVAEDGERKVPVMIHRAILGSLERFIGILTEEFA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  PLWL+P Q ++  IT S  EYAQE    L+      ++D RNE I +KIREH++K++
Sbjct: 531 GFFPLWLAPQQVVILNITDSQGEYAQECVKKLQKSGFRAKSDLRNEKIGFKIREHTLKRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P +++ GDKE     + +R        K+SL   I +  +E
Sbjct: 591 PYMLVVGDKEMEAGEVAVRSRSGDDLGKMSLESFIAMANQE 631


>gi|261250893|ref|ZP_05943467.1| threonyl-tRNA synthetase [Vibrio orientalis CIP 102891]
 gi|260937766|gb|EEX93754.1| threonyl-tRNA synthetase [Vibrio orientalis CIP 102891]
          Length = 642

 Score =  629 bits (1622), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 298/642 (46%), Positives = 428/642 (66%), Gaps = 17/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS + F    +  DVA+SI   LAK  +A  ++G   D  D + ++ S+EIIT +
Sbjct: 4   ITLPDGSQRQFDNPVSTLDVAQSIGPGLAKATIAGRVDGNRVDACDLIEQDASLEIITVK 63

Query: 66  DP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  A++ ++PE ++AIGP I++GFYYD D E   + ++L +IEK
Sbjct: 64  DEVDGLEIVRHSCAHLLGHAIKQLYPEAKMAIGPTIDNGFYYDIDLEYSLTQEDLEKIEK 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLC 183
           +M+E+       +K+ +S ++AR+ FE++ E YK+EIL E++   +   LY   E+ D+C
Sbjct: 124 RMKELAKTKYQVIKKKVSWQEARDAFEARGETYKMEILDENVSRDDRPGLYHHEEYIDMC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV   G   + F L+ VAGAYWRG+S+  ML RIYGTA++ ++ L  +L  LEE+ K
Sbjct: 184 RGPHVPHMG-FCQHFTLLNVAGAYWRGNSDNKMLQRIYGTAFHDKKALKAHLTRLEEAAK 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRK+ +++DLFH+ ++  G++FWH  GW IF+ L  ++R K+ +  Y+E+  P ++D+
Sbjct: 243 RDHRKIGKQLDLFHMQQEAPGMVFWHHNGWSIFRDLEVFVREKLTEYGYQEVKGPLIMDR 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y   MF       T  + R +ALKPMNCPGHV +FN GLKSYR+LP+R+
Sbjct: 303 VLWERSGHWDKYAEAMFT------TSSENREYALKPMNCPGHVQIFNQGLKSYRDLPLRM 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHG+MRVRGFTQDDAH+FCT+ Q+  E      ++   Y+ FGF+ 
Sbjct: 357 AEFGSCHRNEPSGALHGIMRVRGFTQDDAHIFCTESQIQEEVTSCIKMVYDTYQTFGFDN 416

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+VKLSTRPEKRVGSD +WD +E  +K  L+ +       I   +  GEGAFYGPK E+ 
Sbjct: 417 IVVKLSTRPEKRVGSDEIWDQSEEALKQSLEAMD------IAYEIQEGEGAFYGPKIEFT 470

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D + R WQCGT+Q+DFNLP R  A YV+ ++E+  PVMIHRA+ GS+ERFIGI+IE +
Sbjct: 471 LHDCLDRAWQCGTVQLDFNLPGRLGATYVDENNERQTPVMIHRAILGSLERFIGILIEEY 530

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WLSP QA++  IT    +Y QE+A  L+   +  + D RNE I +KIREH++K+
Sbjct: 531 YGFFPTWLSPEQAVIMNITDKQSDYVQEVAQKLQKCGIRAKADLRNEKIGFKIREHTLKR 590

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P +++CGD+E     I +R        K  + D I  +  E
Sbjct: 591 VPFMLVCGDQEMEAGEIAVRTRKGKDLGKFKVDDFISYIQDE 632


>gi|195937403|ref|ZP_03082785.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4024]
 gi|261227789|ref|ZP_05942070.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK2000]
 gi|261258046|ref|ZP_05950579.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK966]
 gi|320641567|gb|EFX10955.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. G5101]
 gi|320646926|gb|EFX15759.1| threonyl-tRNA synthetase [Escherichia coli O157:H- str. 493-89]
 gi|320668281|gb|EFX35108.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. LSU-61]
          Length = 622

 Score =  629 bits (1622), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 292/601 (48%), Positives = 413/601 (68%), Gaps = 16/601 (2%)

Query: 25  DVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAE 83
           DVA  I   LAK  +A  +NG++ D  D +  +  + IIT +D   L +IRHSCAH++  
Sbjct: 2   DVALDIGPGLAKACIAGRVNGELVDACDLIENDAQLSIITAKDEEGLEIIRHSCAHLLGH 61

Query: 84  AVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSH 143
           A++ +WP  ++AIGP+I++GFYYD D ++  + +++  +EK+M E+  ++   +K+ +S 
Sbjct: 62  AIKQLWPHTKMAIGPVIDNGFYYDVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVSW 121

Query: 144 EKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMK 202
            +ARE F ++ E+YKV IL E+I   +   LY   E+ D+CRGPHV +  +    FKLMK
Sbjct: 122 HEARETFANRGESYKVSILDENIAHDDKPGLYFHEEYVDMCRGPHVPNM-RFCHHFKLMK 180

Query: 203 VAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDG 262
            AGAYWRGDSN  ML RIYGTAW  ++ L  YL  LEE+ KRDHRK+ +++DL+H+ E+ 
Sbjct: 181 TAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEA 240

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
            G++FWH  GW IF+ L  ++R K+K+  Y+E+  P ++D+ LW+++GHWD+Y+  MF  
Sbjct: 241 PGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFT- 299

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
                T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+AEFGS +RNEPSGSLHGLM
Sbjct: 300 -----TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLM 354

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALW 441
           RVRGFTQDDAH+FCT+EQ+ +E      L+  +Y  FGFEKI+VKLSTRPEKR+GSD +W
Sbjct: 355 RVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEKIVVKLSTRPEKRIGSDEMW 414

Query: 442 DDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFN 501
           D AE  +   L+      ++ I     LGEGAFYGPK E+ L D + R WQCGT+Q+DF+
Sbjct: 415 DRAEADLAVALE------ENNIPFEYQLGEGAFYGPKIEFTLYDCLDRAWQCGTVQLDFS 468

Query: 502 LPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT 561
           LPSR +A YV   +E+  PVMIHRA+ GS+ERFIGI+ E F G  P WL+P+Q ++  IT
Sbjct: 469 LPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVIMNIT 528

Query: 562 SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
            S  EY  E+   L +  + ++ D RNE I +KIREH+++++P +++CGDKE     I +
Sbjct: 529 DSQSEYVNELTQKLSNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKIAV 588

Query: 622 R 622
           R
Sbjct: 589 R 589


>gi|149185120|ref|ZP_01863437.1| threonyl-tRNA synthetase [Erythrobacter sp. SD-21]
 gi|148831231|gb|EDL49665.1| threonyl-tRNA synthetase [Erythrobacter sp. SD-21]
          Length = 671

 Score =  629 bits (1622), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 309/672 (45%), Positives = 433/672 (64%), Gaps = 31/672 (4%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           +K++ PDGS++     +T +DVA +I   LAK A+A  ++G++ D++ P   +  + ++T
Sbjct: 5   LKISLPDGSVREMEPGSTPADVAAAIGPGLAKAAIAARVDGELRDINRPFEGDAELALVT 64

Query: 64  PEDPR-SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF---DKEQPFSSDEL 119
             D + +L + RH  AH++AEAVQS++P  Q+  GP  +DGFYYD    D  +PFS D+L
Sbjct: 65  GRDEKDALELARHDFAHVLAEAVQSLFPGTQITFGPATDDGFYYDVKASDTREPFSMDDL 124

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE- 178
             IE++M+ II  D P  ++  S ++  + +E++ E +K E  + +P  E +T+Y  GE 
Sbjct: 125 PAIEEEMRRIIKADKPLRREVWSRQQLIDKWEAEGEVFKAEWAKELPEDEELTVYWSGED 184

Query: 179 WFDLCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           W D+CRGPH+ STG++  + FKLM+VAGAYWRGD     L+RIYGT W  +++L  +L  
Sbjct: 185 WLDMCRGPHLASTGKLDPQAFKLMRVAGAYWRGDQKNAQLTRIYGTGWLNKKQLNAHLTR 244

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
           LEE+ KRDHRKL REMDLFH+ E+  G +FWH  G++I++ L +YMRRK+    Y EI T
Sbjct: 245 LEEAAKRDHRKLGREMDLFHLQEEAHGSVFWHPNGYRIWRELEAYMRRKMDGAGYREIKT 304

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAV-----------------KCADDTIKDLRTFALKPM 339
           PQ++D   W  SGHW  Y  NMFAV                 K ADD        A+KPM
Sbjct: 305 PQLMDVRQWTASGHWGKYAENMFAVPDIVPDVDDSGAASAHPKVADDA----DWMAIKPM 360

Query: 340 NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQ 399
           NCP HV VF  G+ SYR+LP+RL E G  +RNEP G+LHGLMRVR FTQDDAH+FC++ Q
Sbjct: 361 NCPAHVLVFKQGITSYRDLPIRLGEMGCCHRNEPHGALHGLMRVRQFTQDDAHIFCSESQ 420

Query: 400 MFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSS 459
           +  E      L  S+YKDFGF    +KL+ RPEKR+GSDA WD AE  ++  ++     +
Sbjct: 421 VVEEVRAFCKLAESVYKDFGF-TFAIKLALRPEKRLGSDADWDKAEQELRDAVEEAGMMN 479

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
           ++      L GEGAFY PK E+ L DAIGR WQ GTIQ D  LP R +A YV    EK  
Sbjct: 480 EE-FGWEELPGEGAFYAPKLEWHLTDAIGRTWQVGTIQGDRVLPERLDASYVGEDGEKHR 538

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH 579
           PVM+HRA+FGS ERFIGI+IE++ G +P+WL+P QA+V TI S A +YA+E    L++  
Sbjct: 539 PVMLHRAIFGSYERFIGILIEHYAGRMPVWLAPTQAVVATIVSDADDYAKEAVAKLEAAG 598

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
           + + +D RNE INYK+REHS  K+P +++ G++EA E ++ +R  G    + + L +AI 
Sbjct: 599 IRVASDLRNEKINYKVREHSHAKVPHLLVVGNREAEEGTVAVRTLGQQHQKVMPLEEAIA 658

Query: 640 ILTKESLPPDCQ 651
           +L  E+ PPD +
Sbjct: 659 MLKAEATPPDLR 670


>gi|157145991|ref|YP_001453310.1| threonyl-tRNA synthetase [Citrobacter koseri ATCC BAA-895]
 gi|157083196|gb|ABV12874.1| hypothetical protein CKO_01745 [Citrobacter koseri ATCC BAA-895]
          Length = 622

 Score =  629 bits (1622), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 289/601 (48%), Positives = 414/601 (68%), Gaps = 16/601 (2%)

Query: 25  DVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAE 83
           DVA  I   LAK  +A  +NG++ D SD +  +  + IIT +D   L +IRHSCAH++  
Sbjct: 2   DVALDIGPGLAKACIAGRVNGELVDASDLIENDAQLAIITAKDEEGLEIIRHSCAHLLGH 61

Query: 84  AVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSH 143
           A++ +WP  ++AIGP++++GFYYD D ++  + +++  +EK+M E+  ++   +K+ +S 
Sbjct: 62  AIKQLWPNTKMAIGPVVDNGFYYDIDLDRTLTQEDVDALEKRMHELAEKNYDVIKKKVSW 121

Query: 144 EKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMK 202
            +ARE F  + E YKV IL E+I   +   LY   E+ D+CRGPHV +  +    FKLMK
Sbjct: 122 HEARETFVKRGETYKVSILDENIAHDDKPGLYHHEEYVDMCRGPHVPNM-RFCHHFKLMK 180

Query: 203 VAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDG 262
            AGAYWRGDSN  ML RIYGTAW  ++ L  YL  LEE+ KRDHRK+ +++DL+H+ E+ 
Sbjct: 181 TAGAYWRGDSNNKMLQRIYGTAWADKKSLNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEA 240

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
            G++FWH  GW IF+ L  ++R K+K+  Y+E+  P ++D+ LW+++GHW++Y+  MF  
Sbjct: 241 PGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWENYKDAMFT- 299

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
                T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+AEFGS +RNEPSG+LHGLM
Sbjct: 300 -----TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGLM 354

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALW 441
           RVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  FGFEKI+VKLSTRPEKR+GSD +W
Sbjct: 355 RVRGFTQDDAHIFCTEEQIRDEVNACIRMVYDMYSTFGFEKIVVKLSTRPEKRIGSDEMW 414

Query: 442 DDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFN 501
           D AE  +   L+      ++ I     LGEGAFYGPK E+ L D + R WQCGT+Q+DF+
Sbjct: 415 DRAEADLAVALE------ENNIPFEYQLGEGAFYGPKIEFTLYDCLDRAWQCGTVQLDFS 468

Query: 502 LPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT 561
           LPSR NA YV  ++E+  PVMIHRA+ GS+ERFIGI+ E F G  P WL+P+Q +V  IT
Sbjct: 469 LPSRLNASYVGENNERQVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVVMNIT 528

Query: 562 SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
            +  EY  E+   L++  + ++ D RNE I +KIREH+++++P +++CGDKE     + +
Sbjct: 529 DTQSEYVNELTQKLQNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAV 588

Query: 622 R 622
           R
Sbjct: 589 R 589


>gi|145298933|ref|YP_001141774.1| threonyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
           A449]
 gi|166223317|sp|A4SMA4|SYT_AERS4 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|142851705|gb|ABO90026.1| threonyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
           A449]
          Length = 642

 Score =  629 bits (1622), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 300/643 (46%), Positives = 430/643 (66%), Gaps = 20/643 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  DVA  I   LAK  +A  +NG++ D  + +  + S+ IIT +
Sbjct: 4   ITLPDGSQRQFAHSVSVMDVAADIGPGLAKACIAGRVNGELVDACELIEADASLAIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L ++RHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D ++  + D+LA +E++
Sbjct: 64  DEEGLDILRHSCAHLLGHAIKQLWPQTKMAIGPVIDNGFYYDVDLDRTLTDDDLAALEER 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M  + A+D   +K+ +S ++AR++FE++ E YKVEIL ++I   +   LY   E+ D+CR
Sbjct: 124 MLALAAKDYDVIKKKVSWQEARDVFEARGETYKVEILDQNIARDDQPGLYHHEEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +      F KL K++GAYWRGDSN  ML RIYGTAW  +++L  YL  LEE+ KR
Sbjct: 184 GPHVPNMRHCHHF-KLQKMSGAYWRGDSNNKMLQRIYGTAWADKKQLKGYLQRLEEASKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF+ L +++R K+K+ DY+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELETFIRGKLKEYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SGHW+ Y   MF  +  +      R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWERSGHWEKYAQAMFTTQSEN------REYAIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+  E      ++  +Y  FGFE I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIMEEVSACIRMVYDVYGTFGFENI 416

Query: 424 MVKLSTRPEKRVGSDALWD--DAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
           +VKLSTRPE+R+GSD  WD  +A      VL+ +K   Q         GEGAFYGPK E+
Sbjct: 417 VVKLSTRPEQRIGSDEAWDRAEAALAEALVLNGLKYDLQP--------GEGAFYGPKIEF 468

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L D + R WQCGT+Q+DF LP R  A YV   +E+  PVMIHRA+ GS+ERFIGI+ E 
Sbjct: 469 TLHDCLDRAWQCGTVQLDFALPGRLGATYVGEDNERHVPVMIHRAILGSLERFIGILTEE 528

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  P WL+P QA+V  IT +  +YA ++A  L    L  + D RNE I +KIREH++K
Sbjct: 529 YAGLFPTWLAPTQAVVMNITDNQADYAVKVAKALNDAGLRAKADLRNEKIGFKIREHTLK 588

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           ++P +++CGDKE     I +R           + + + +LT+E
Sbjct: 589 RVPFMLVCGDKEVEAGKIAVRTRKGADLGTYPVEELVALLTQE 631


>gi|163801061|ref|ZP_02194961.1| threonyl-tRNA synthetase [Vibrio sp. AND4]
 gi|159175410|gb|EDP60207.1| threonyl-tRNA synthetase [Vibrio sp. AND4]
          Length = 642

 Score =  629 bits (1622), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 299/642 (46%), Positives = 428/642 (66%), Gaps = 17/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPE 65
           +T PDGS + F    +  +VA+SI   LAK  +A  +NG   D  DP+ E  S+EIIT +
Sbjct: 4   ITLPDGSQRQFDNPVSTMEVAQSIGPGLAKATIAGRVNGNRVDACDPIEEDASLEIITVK 63

Query: 66  DP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  A++ ++P+ ++AIGP I++GFYYD D ++  + D+L +IEK
Sbjct: 64  DEVDGLEIVRHSCAHLLGHALKQLYPQAKMAIGPTIDNGFYYDIDLDESLTQDDLEKIEK 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLC 183
           +M+E+       +K+ +S ++AR+ FES+ E YKVEIL E++   +   LY   E+ D+C
Sbjct: 124 RMKELAKTKYEVVKKKVSWQEARDTFESRGEPYKVEILDENVSRDDRPGLYHHEEYIDMC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +     + F LM VAGAYWRG+S+  ML RIYGTA++ ++ L  +L  LEE+ K
Sbjct: 184 RGPHVPNMS-FCQHFTLMNVAGAYWRGNSDNKMLQRIYGTAFHDKKALKAHLTRLEEAAK 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ ++  G++FWH  GW IF+ L  ++R K+ +  Y+E+  P ++D+
Sbjct: 243 RDHRKLGKQLDLFHMQQEAPGMVFWHHNGWSIFRDLEVFVRSKLDEYGYQEVKGPLIMDR 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y   MF       T  + R +ALKPMNCPGHV +FN GLKSYR+LP+R+
Sbjct: 303 VLWERSGHWDKYADAMFT------TASENREYALKPMNCPGHVQIFNQGLKSYRDLPLRM 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHG+MRVRGFTQDDAH+FCT+ Q+  E      ++   Y+ FGF+ 
Sbjct: 357 AEFGSCHRNEPSGALHGIMRVRGFTQDDAHIFCTESQIQEEVTSCIKMVYDTYQTFGFDN 416

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+VKLSTRPE+RVGSD +WD +E  +K  L++++      I   +  GEGAFYGPK E+ 
Sbjct: 417 IVVKLSTRPEQRVGSDEIWDQSEEALKQSLESME------IPYEIQEGEGAFYGPKIEFT 470

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D + R WQCGT+Q+DFNLP R  A YV  ++E+  PVMIHRA+ GS+ERFIGI+IE +
Sbjct: 471 LYDCLDRAWQCGTVQLDFNLPGRLGATYVGENNERLVPVMIHRAILGSLERFIGILIEEY 530

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P QAI+  IT    +Y QE+   L+   +  + D RNE I +KIREH++K+
Sbjct: 531 AGFFPTWLAPEQAILMNITDKQSDYVQEVVQKLQKSGIRAKADLRNEKIGFKIREHTLKR 590

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P +++ GD+E     I +R        K  + D I  +  E
Sbjct: 591 VPYMLVVGDQEMEAGEIAVRTRKGKDLGKFKVDDFIAYIQDE 632


>gi|291085451|ref|ZP_06353132.2| threonine--tRNA ligase [Citrobacter youngae ATCC 29220]
 gi|291071041|gb|EFE09150.1| threonine--tRNA ligase [Citrobacter youngae ATCC 29220]
          Length = 622

 Score =  629 bits (1622), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 290/601 (48%), Positives = 414/601 (68%), Gaps = 16/601 (2%)

Query: 25  DVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAE 83
           DVA  I   LAK  +A  +NG++ D SD +  +  + IIT +D   L +IRHSCAH++  
Sbjct: 2   DVALDIGPGLAKATIAGRVNGELVDASDLIEHDAKLSIITAKDEEGLEIIRHSCAHLLGH 61

Query: 84  AVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSH 143
           A++ +WP  ++AIGP++++GFYYD D ++  + +++  +EK+M E+  ++   +K+ +S 
Sbjct: 62  AIKQLWPHTKMAIGPVVDNGFYYDIDLDRTLTQEDVDALEKRMHELAEKNYDVIKKKVSW 121

Query: 144 EKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMK 202
            +ARE F  + E YKV IL E+I   +   LY   E+ D+CRGPHV +  +    FKLMK
Sbjct: 122 YEARETFVKRGETYKVSILDENIAHDDKPGLYHHEEYVDMCRGPHVPNM-RFCHHFKLMK 180

Query: 203 VAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDG 262
            AGAYWRGDSN  ML RIYGTAW  ++ L  YL  LEE+ KRDHRK+ +++DL+H+ E+ 
Sbjct: 181 TAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEA 240

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
            G++FWH  GW IF+ L  ++R K+K+  Y+E+  P ++D+ LW+++GHWD+Y+  MF  
Sbjct: 241 PGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFT- 299

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
                T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+AEFGS +RNEPSG+LHGLM
Sbjct: 300 -----TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGLM 354

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALW 441
           RVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  FGFEKI+VKLSTRPEKR+GSD +W
Sbjct: 355 RVRGFTQDDAHIFCTEEQIRDEVNACIRMVYDMYSTFGFEKIVVKLSTRPEKRIGSDEMW 414

Query: 442 DDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFN 501
           D AE  +   L+      ++ I     LGEGAFYGPK E+ L D + R WQCGT+Q+DF+
Sbjct: 415 DRAEADLAVALE------ENNIPFEFQLGEGAFYGPKIEFTLYDCLDRAWQCGTVQLDFS 468

Query: 502 LPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT 561
           LPSR +A YV  ++E+  PVMIHRA+ GS+ERFIGI+ E F G  P WL+P+Q +V  IT
Sbjct: 469 LPSRLSASYVGENNERQVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVVMNIT 528

Query: 562 SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
            S  EY  E+   L++  + ++ D RNE I +KIREH+++++P +++CGDKE     + +
Sbjct: 529 DSQSEYVNELTQKLQNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAV 588

Query: 622 R 622
           R
Sbjct: 589 R 589


>gi|307249432|ref|ZP_07531421.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 4
           str. M62]
 gi|306858506|gb|EFM90573.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 4
           str. M62]
          Length = 643

 Score =  629 bits (1621), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 291/619 (47%), Positives = 421/619 (68%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPE 65
           +T PDGS + F    +  +VA+SI   LAK  +A  +NG+  D  D + E  S+EIIT +
Sbjct: 4   ITLPDGSQRQFDNPVSVMEVAQSIGAGLAKATIAGRVNGERRDACDIISEDSSLEIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ ++P+V++AIGP I++GFYYD D ++  + ++L  IEK+
Sbjct: 64  DEDGLEIIRHSCAHLLGHAIKQLFPDVKMAIGPTIDNGFYYDVDLDRSLTQEDLDAIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K+ +S ++AR+ FE + E YK+ IL E+I       LY   E+ D+CR
Sbjct: 124 MLELAKTNYDVVKKSVSWQEARDTFEKRGEPYKMAILDENIERTATPALYHHEEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKL KVAGAYWRGDS   ML RIYGTAW  +++L +YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLQKVAGAYWRGDSKNKMLQRIYGTAWADKKQLAEYLTRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHR++ + +DL+H+ E+  G++FWH  GW IF+ L +++R K+K+ DY+E+  P ++D+ 
Sbjct: 243 DHRRIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW +Y   MF  +  +      R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWERTGHWQNYADLMFTTQSEN------REYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+ +E      ++  IY  FGF  I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQIESEVTSCIRMVYDIYSTFGFSNI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPE R+G DA+WD AE+ +   L      + + ++  +  GEGAFYGPK E+ L
Sbjct: 417 QVKLSTRPENRIGDDAMWDRAEDGLAKAL------TANGLSYEIQEGEGAFYGPKIEFAL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D + R+WQCGTIQ+DF LP R +A YV   + +  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 RDCLDREWQCGTIQLDFALPGRLDASYVAEDNGRRTPVMIHRAILGSIERFIGIITEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P QA+V  IT S  +Y Q++   L    +  ++D RNE + +K+REH+++++
Sbjct: 531 GFFPTWLAPTQAVVMNITDSQADYVQKVTKALSDAGIRAKSDLRNEKVGFKVREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++CGDKE     + +R
Sbjct: 591 PYMLVCGDKEIEAGKVSVR 609


>gi|294010776|ref|YP_003544236.1| threonyl-tRNA synthetase [Sphingobium japonicum UT26S]
 gi|292674106|dbj|BAI95624.1| threonyl-tRNA synthetase [Sphingobium japonicum UT26S]
          Length = 668

 Score =  629 bits (1621), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 312/672 (46%), Positives = 426/672 (63%), Gaps = 25/672 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           M + +K+T PDGS++      T +D+A +I   LAK A+A  ++G++ D+  P+  +  +
Sbjct: 1   MSAMLKITLPDGSVREVAPGTTPADIAAAIGPGLAKAAIAARVDGELRDIMRPLEADAQL 60

Query: 60  EIITPED-PRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF------DKEQ 112
            ++T  D   +L + RH  AH++AEAVQ+++P  Q+  GP  +DGFYYDF       K +
Sbjct: 61  ALVTSRDEADALELARHDFAHVLAEAVQALFPGTQITFGPATDDGFYYDFAPPLVEGKPR 120

Query: 113 PFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVT 172
           PF+ ++L  IE KM+EIIA D P  ++    E     + +  E +K E    +P  E +T
Sbjct: 121 PFTEEDLPAIEAKMREIIAADKPLRREVWKREDLIARWRAGGETFKAEWAAELPEGEELT 180

Query: 173 LY-RQGEWFDLCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQE 230
           +Y   G+W D+CRGPH+ STG++    FKL +V+GAYWRGD    MLSRIYGT W  +++
Sbjct: 181 VYWSGGDWLDMCRGPHLASTGKLDPAAFKLTRVSGAYWRGDQKNAMLSRIYGTGWLNRKQ 240

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
           L  +L  LEE+ +RDHRKL  EMDLFH+ ++  G +FWH KG+ I++ L +YMRR I D 
Sbjct: 241 LDAHLTRLEEAARRDHRKLGAEMDLFHLQQEAHGSVFWHPKGYIIWRALEAYMRRAIDDA 300

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD--------LRTFALKPMNC 341
            Y E+ TPQV+D   W+QSGHW  YR NMF +      ++D            ALKPMNC
Sbjct: 301 GYREVKTPQVMDARQWEQSGHWGKYRENMFVIPDEVPNVEDEGPLVSDDADWMALKPMNC 360

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
           P HV +F  G+KSYR+LP+R  E G  +RNEP G+LHGLMRVR FTQDDAH+FC ++Q+ 
Sbjct: 361 PAHVLIFRQGIKSYRDLPLRFYENGCCHRNEPHGALHGLMRVRQFTQDDAHIFCREDQIV 420

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E      L   IYKDFGF    +KL+ RPEKR GSDA+WD AEN ++   D +  +  D
Sbjct: 421 EEVRAFCALADRIYKDFGF-TYSIKLALRPEKRFGSDAMWDQAENELR---DAVAAAGLD 476

Query: 462 RINTGV--LLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
               G   L GEGAFY PK E+ L DAIGR WQ GTIQ D  LP R +A YV    E+  
Sbjct: 477 TPEYGWEELPGEGAFYAPKLEWHLTDAIGRTWQVGTIQSDRVLPERLDASYVGEDGERHR 536

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH 579
           PVM+HRA+FGS ERFIGI+IE++ G  PLWL+P+QA+V TI S A  YA E+A  L++  
Sbjct: 537 PVMLHRAIFGSYERFIGILIEHYAGRFPLWLAPVQAVVATIVSDADGYAIEVAEKLRAAG 596

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
           +  ETD RNE INYK+REHS+ K+P +++ G +EA E ++ +R  G      +S+ D I 
Sbjct: 597 IRAETDLRNEKINYKVREHSLAKVPNLLVVGRREADEGTVALRELGKEGQSVLSVDDVIA 656

Query: 640 ILTKESLPPDCQ 651
            L KE+  PD +
Sbjct: 657 RLAKEARAPDMR 668


>gi|188533977|ref|YP_001907774.1| threonyl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
 gi|238689736|sp|B2VEM1|SYT_ERWT9 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|188029019|emb|CAO96887.1| Threonyl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
          Length = 642

 Score =  629 bits (1621), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 288/619 (46%), Positives = 422/619 (68%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDP-VREGSIEIITPE 65
           +T PDGS ++F    +  D+A  I   LAK  +A  +NG++ D  DP V + S+ IIT +
Sbjct: 4   ITLPDGSQRSFDHAVSVMDIAMDIGPGLAKACIAGRVNGELVDAVDPIVDDASVAIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D ++  + +++  +EK+
Sbjct: 64  DEAGLEIIRHSCAHLLGHAIKQLWPDTKMAIGPVIDNGFYYDVDLDRTLTQEDIELLEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M ++   +   +K+ +S ++AR+ F ++ E YK  IL E+I   +   LY   E+ D+CR
Sbjct: 124 MHQLAETNYDVIKKKVSWQEARDAFAARGENYKTTILDENISHDDRPGLYHHQEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKL K++GAYWRGDSN  ML RIYGTAW  +++L  YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLQKISGAYWRGDSNNKMLQRIYGTAWADKKQLAAYLLRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF+ L  ++R K+K+ +Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRTKLKEYEYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW++Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWENYKEAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  FGFEKI
Sbjct: 357 EFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQVRDEVNSCIKMVYDMYSTFGFEKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+GSD LWD +E  +   L       ++ I      GEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEKRIGSDDLWDRSEADLAAAL------KENGIPFEYQPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF+LP R +A YV   +E+  PVMIHRA+ GS+ERFIGI+ E + 
Sbjct: 471 HDCLDRAWQCGTVQLDFSLPGRLSASYVGESNERQVPVMIHRAILGSMERFIGILTEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+Q +V  IT    EY  E+   L++  +  + D RNE I +KIREH+++++
Sbjct: 531 GFFPTWLAPVQVVVMNITDGQSEYVAELTRKLQNAGIRAKADLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++CGDKE     + +R
Sbjct: 591 PYMLVCGDKEVEAGKVAVR 609


>gi|238783384|ref|ZP_04627407.1| Threonyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
 gi|238715629|gb|EEQ07618.1| Threonyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
          Length = 642

 Score =  629 bits (1621), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 288/619 (46%), Positives = 423/619 (68%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D SD +  +  + IIT +
Sbjct: 4   ITLPDGSQRHYDHAVSALDVALDIGPGLAKACIAGRVNGELVDASDLIESDAQLAIITTK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L ++RHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D ++  + ++L  +EK+
Sbjct: 64  DAEGLEILRHSCAHLLGHAIKQLWPDTKMAIGPVIDNGFYYDVDIDRTLTQEDLDLLEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+  +D   +K+ +S ++AR+ F ++ E YKV IL E+I   +   LY   E+ D+CR
Sbjct: 124 MHELADKDYDVIKKKVSWQEARDTFAARGEDYKVAILDENISRDDRPGLYHHEEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKL K +GAYWRGDS   ML RIYGTAW  +++L  YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLQKTSGAYWRGDSKNKMLQRIYGTAWGDKKQLNAYLQRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF+ L +++R K+K+  Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELETFVRMKLKEYQYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW++Y  +MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+RLA
Sbjct: 303 LWEKTGHWENYAEHMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRLA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  FGFEKI
Sbjct: 357 EFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQVRDEVNSCIKMVYDMYSTFGFEKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+GSD  W  AE+ +   L      +++ I      GEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEKRIGSDEQWTRAESDLAAAL------TENGIPFDYQPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF+LP R +A Y+  ++++  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 HDCLDRAWQCGTVQLDFSLPGRLSASYIGENNDRQVPVMIHRAILGSIERFIGILTEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+Q +V  IT S  +Y Q++   L+   +  + D RNE I +KIREH+++++
Sbjct: 531 GFFPTWLAPVQVVVMNITDSQSDYVQQVTKKLQDAGIRAKADLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++CGDKE     I +R
Sbjct: 591 PYMLVCGDKEVESGKIAVR 609


>gi|227885859|ref|ZP_04003664.1| threonine--tRNA ligase [Escherichia coli 83972]
 gi|300898493|ref|ZP_07116830.1| threonyl-tRNA synthetase [Escherichia coli MS 198-1]
 gi|300917719|ref|ZP_07134368.1| threonyl-tRNA synthetase [Escherichia coli MS 115-1]
 gi|300930805|ref|ZP_07146177.1| threonyl-tRNA synthetase [Escherichia coli MS 187-1]
 gi|300951319|ref|ZP_07165163.1| threonyl-tRNA synthetase [Escherichia coli MS 116-1]
 gi|300958608|ref|ZP_07170733.1| threonyl-tRNA synthetase [Escherichia coli MS 175-1]
 gi|301050944|ref|ZP_07197793.1| threonyl-tRNA synthetase [Escherichia coli MS 185-1]
 gi|301647910|ref|ZP_07247687.1| threonyl-tRNA synthetase [Escherichia coli MS 146-1]
 gi|227837432|gb|EEJ47898.1| threonine--tRNA ligase [Escherichia coli 83972]
 gi|300297398|gb|EFJ53783.1| threonyl-tRNA synthetase [Escherichia coli MS 185-1]
 gi|300314733|gb|EFJ64517.1| threonyl-tRNA synthetase [Escherichia coli MS 175-1]
 gi|300357845|gb|EFJ73715.1| threonyl-tRNA synthetase [Escherichia coli MS 198-1]
 gi|300415120|gb|EFJ98430.1| threonyl-tRNA synthetase [Escherichia coli MS 115-1]
 gi|300449416|gb|EFK13036.1| threonyl-tRNA synthetase [Escherichia coli MS 116-1]
 gi|300461363|gb|EFK24856.1| threonyl-tRNA synthetase [Escherichia coli MS 187-1]
 gi|301073967|gb|EFK88773.1| threonyl-tRNA synthetase [Escherichia coli MS 146-1]
 gi|312946320|gb|ADR27147.1| threonyl-tRNA synthetase [Escherichia coli O83:H1 str. NRG 857C]
 gi|313649261|gb|EFS13695.1| threonyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|315618916|gb|EFU99499.1| threonyl-tRNA synthetase [Escherichia coli 3431]
 gi|323169354|gb|EFZ55030.1| threonyl-tRNA synthetase [Shigella sonnei 53G]
 gi|323186901|gb|EFZ72219.1| threonyl-tRNA synthetase [Escherichia coli RN587/1]
 gi|324007092|gb|EGB76311.1| threonyl-tRNA synthetase [Escherichia coli MS 57-2]
 gi|332090644|gb|EGI95739.1| threonyl-tRNA synthetase [Shigella boydii 5216-82]
 gi|332093917|gb|EGI98970.1| threonyl-tRNA synthetase [Shigella dysenteriae 155-74]
 gi|332759227|gb|EGJ89536.1| threonyl-tRNA synthetase [Shigella flexneri K-671]
 gi|332762542|gb|EGJ92807.1| threonyl-tRNA synthetase [Shigella flexneri 4343-70]
 gi|332767218|gb|EGJ97413.1| threonyl-tRNA synthetase [Shigella flexneri 2930-71]
 gi|333018198|gb|EGK37500.1| threonyl-tRNA synthetase [Shigella flexneri K-304]
          Length = 622

 Score =  629 bits (1621), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 291/601 (48%), Positives = 413/601 (68%), Gaps = 16/601 (2%)

Query: 25  DVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAE 83
           DVA  I   LAK  +A  +NG++ D  D +  +  + IIT +D   L +IRHSCAH++  
Sbjct: 2   DVALDIGPGLAKACIAGRVNGELVDACDLIENDAQLSIITAKDEEGLEIIRHSCAHLLGH 61

Query: 84  AVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSH 143
           A++ +WP  ++AIGP+I++GFYYD D ++  + +++  +EK+M E+  ++   +K+ +S 
Sbjct: 62  AIKQLWPHTKMAIGPVIDNGFYYDVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVSW 121

Query: 144 EKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMK 202
            +ARE F ++ E+YKV IL E+I   +   LY   E+ D+CRGPHV +  +    FKLMK
Sbjct: 122 HEARETFANRGESYKVSILDENIAHDDKPGLYFHEEYVDMCRGPHVPNM-RFCHHFKLMK 180

Query: 203 VAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDG 262
            AGAYWRGDSN  ML RIYGTAW  ++ L  YL  LEE+ KRDHRK+ +++DL+H+ E+ 
Sbjct: 181 TAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEA 240

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
            G++FWH  GW IF+ L  ++R K+K+  Y+E+  P ++D+ LW+++GHWD+Y+  MF  
Sbjct: 241 PGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFT- 299

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
                T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+AEFGS +RNEPSGSLHGLM
Sbjct: 300 -----TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLM 354

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALW 441
           RVRGFTQDDAH+FCT+EQ+ +E      L+  +Y  FGFEKI+VKLSTRPEKR+GSD +W
Sbjct: 355 RVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEKIVVKLSTRPEKRIGSDEMW 414

Query: 442 DDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFN 501
           D AE  +   L+      ++ I     LGEGAFYGPK E+ L D + R WQCGT+Q+DF+
Sbjct: 415 DRAEADLAVALE------ENNIPFEYQLGEGAFYGPKIEFTLYDCLDRAWQCGTVQLDFS 468

Query: 502 LPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT 561
           LPSR +A YV   +E+  PVMIHRA+ GS+ERFIGI+ E F G  P WL+P+Q ++  IT
Sbjct: 469 LPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVIMNIT 528

Query: 562 SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
            S  EY  E+   L +  + ++ D RNE I +KIREH+++++P +++CGDKE     + +
Sbjct: 529 DSQSEYVNELTQKLSNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAV 588

Query: 622 R 622
           R
Sbjct: 589 R 589


>gi|238749482|ref|ZP_04610987.1| Threonyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
 gi|238712137|gb|EEQ04350.1| Threonyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
          Length = 642

 Score =  629 bits (1621), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 287/619 (46%), Positives = 423/619 (68%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + +    +  DVA  I   LAK  +A  +NG++ D SD +  +  + IIT +
Sbjct: 4   ITLPDGSQRQYDHAVSALDVALDIGPGLAKACIAGRVNGELVDASDLIESDAQLAIITTK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L ++RHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D ++  + ++L  +EK+
Sbjct: 64  DAEGLEILRHSCAHLLGHAIKQLWPDTKMAIGPVIDNGFYYDVDIDRTLTQEDLDLLEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+  +D   +K+ +S ++AR+ F ++ E YKV IL E+I   +   LY   E+ D+CR
Sbjct: 124 MHELADKDYDVIKKKVSWQEARDTFAARGEDYKVAILDENISRDDRPGLYHHEEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKL K +GAYWRGDS   ML RIYGTAW  +++L  YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLQKTSGAYWRGDSKNKMLQRIYGTAWGDKKQLNAYLQRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF+ L +++R K+K+  Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELETFVRMKLKEYQYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW++Y  +MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWENYAEHMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  FGFEKI
Sbjct: 357 EFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQVRDEVNSCIKMVYDMYSTFGFEKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+GSD LW  AE+ +   L      +++ I      GEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEKRIGSDDLWTRAEDDLAAAL------TENGIPFDYQPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF+LP R +A Y+  ++++  PVMIHRA+ GS+ERFIGI+ E + 
Sbjct: 471 HDCLDRAWQCGTVQLDFSLPGRLSASYIGENNDRQVPVMIHRAILGSMERFIGILTEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+Q +V  IT S  +Y Q++   L+   +  + D RNE I +KIREH+++++
Sbjct: 531 GFFPTWLAPVQVVVMNITDSQSDYVQQVTKKLQDAGIRAKADLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++CGDKE     I +R
Sbjct: 591 PYMLVCGDKEVESGKIAVR 609


>gi|107102275|ref|ZP_01366193.1| hypothetical protein PaerPA_01003332 [Pseudomonas aeruginosa PACS2]
          Length = 621

 Score =  629 bits (1621), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 282/601 (46%), Positives = 417/601 (69%), Gaps = 15/601 (2%)

Query: 24  SDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIRHSCAHIMA 82
           ++VA+SI   LAK  +A  ++G++ D  D + R+ +++IITP+D   L +IRHSCAH++ 
Sbjct: 2   AEVAQSIGAGLAKATLAGKVDGRLVDACDTIDRDATLQIITPKDEEGLEIIRHSCAHLVG 61

Query: 83  EAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLS 142
            AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A I+++M+E+I +D   +K+   
Sbjct: 62  HAVKQLYPTAKMVIGPVIEEGFYYDIFFERPFTPEDMAAIQQRMRELIDKDYDVIKKMTP 121

Query: 143 HEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMK 202
             +  ELF+S+ E YK+ +++ +P ++ + LY   E+ D+CRGPHV +T +  K F+L K
Sbjct: 122 RAEVIELFKSRGEDYKLRLIDDMPDEKAMGLYFHEEYVDMCRGPHVPNT-RFLKAFQLTK 180

Query: 203 VAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDG 262
           ++GAYWRGDS    L RIYGTAW  +++L  Y+  +EE+EKRDHR++ +++DLFH+ E+ 
Sbjct: 181 ISGAYWRGDSKNEQLQRIYGTAWADKKQLAAYIQRIEEAEKRDHRRIGKQLDLFHLQEEA 240

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
            G++FWH  GW ++Q L  YMR+  +D  Y E+ TPQV+D+ LW++SGHW +Y  NMF  
Sbjct: 241 PGMVFWHPNGWSVYQVLEQYMRKVQRDHGYVEVRTPQVVDRILWERSGHWSNYAENMFT- 299

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
                T  + R +A+KPMNCP HV +FN GLKSYR+LP+RLAEFG+ +RNEPSG+LHG+M
Sbjct: 300 -----TSSESRDYAVKPMNCPCHVQIFNQGLKSYRDLPLRLAEFGACHRNEPSGALHGIM 354

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALW 441
           RVRGFTQDDAH+FCT+EQ+  E      L + +Y+DFGF  I +KLSTRP KRVGSD LW
Sbjct: 355 RVRGFTQDDAHIFCTEEQVKKEAADFIKLTLQVYRDFGFTDIAMKLSTRPAKRVGSDELW 414

Query: 442 DDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFN 501
           D AE  +   L+      +  +      GEGAFYGPK E+ LKD +GR+WQCGT+Q D N
Sbjct: 415 DRAEGALADALN------ESGLAWEYQPGEGAFYGPKIEFTLKDCLGRNWQCGTLQYDPN 468

Query: 502 LPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT 561
           LP R +A Y+   + +  PVM+HRA+ GS ERFIG++IE++ G  P WL+P QA+V  IT
Sbjct: 469 LPERLDASYIAEDNNRKRPVMLHRAILGSFERFIGMLIEHYAGAFPAWLAPTQAVVMNIT 528

Query: 562 SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
               ++A E+  +L       ++D RNE I +KIREH++ K+P +++ GD+E   +++ +
Sbjct: 529 DKQADFAAEVVRILGESGFRAKSDLRNEKIGFKIREHTLLKVPYLLVIGDREVESKAVAV 588

Query: 622 R 622
           R
Sbjct: 589 R 589


>gi|254374591|ref|ZP_04990072.1| threonyl-tRNA synthetase [Francisella novicida GA99-3548]
 gi|151572310|gb|EDN37964.1| threonyl-tRNA synthetase [Francisella novicida GA99-3548]
          Length = 634

 Score =  629 bits (1621), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 302/642 (47%), Positives = 426/642 (66%), Gaps = 16/642 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           I + FPDGSI+ F       DVA+SIS SLAK  VA  I+ ++ D  D +     + +IT
Sbjct: 2   INIRFPDGSIREFEAGVNSLDVAKSISPSLAKATVAAYIDDQLKDAKDAINSNCELRLIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +DP  L ++RHSCAH++A AV+ ++P  +V IGP++++GFYYDF  ++     +L  IE
Sbjct: 62  VKDPEGLEILRHSCAHLLAHAVKELYPNTEVTIGPVVDNGFYYDFSFKESIGEADLPTIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           KKM+E+  + +P   + +   +A E F+++ E YKVEI++SI A E V +Y Q  + DLC
Sbjct: 122 KKMKELAKKSAPVSYRVVPKAEAIEFFKAQGENYKVEIIDSI-ADEQVKIYTQDNFSDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ +T  V K FKL K+AGAYWRG+S+  ML+RIYGT W T+++L QYL  LEE+EK
Sbjct: 181 RGPHIPNTS-VLKAFKLTKLAGAYWRGNSDNEMLTRIYGTCWATKEDLEQYLNMLEEAEK 239

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQ 302
           RDHRK+ + +DLFH  ED  G+ FWH  G +I++ +  YMR    K    EI TP + D 
Sbjct: 240 RDHRKIGKVLDLFHFQEDSPGIAFWHDNGVRIWRQVEDYMRASNNKYGCSEIRTPLIADF 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LWQ+SGH   Y  NMFA K  +      R FA++PMNCP  V V+N  L SYR+LP+R+
Sbjct: 300 SLWQKSGHASKYAENMFATKSEN------RDFAIRPMNCPTCVQVYNTKLHSYRDLPIRI 353

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFG V+RNEPSGSLHGL+RVR FTQDD H+FCT EQ+  E + +      +YKDFGF  
Sbjct: 354 AEFGIVHRNEPSGSLHGLLRVRSFTQDDGHIFCTPEQVEEEVILMVQQCFEVYKDFGFND 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             VK++ RPE R+G D  WD +E ++K  LD       + ++  +L GEGAFYGPK E+ 
Sbjct: 414 FAVKIALRPENRIGDDETWDKSEQMLKNALDA------NNVSYELLPGEGAFYGPKIEFH 467

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LKDAIGR WQCGTIQ+DF++P R  A Y++ + EK  PVM+HRA+ GS+ERFIG++IE++
Sbjct: 468 LKDAIGRSWQCGTIQLDFSMPQRLGATYIDKNGEKQVPVMLHRAIVGSLERFIGMLIEHY 527

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            GNLPLWL+P+Q  V  I+++  +Y +E+  +L+ + +  + D RNE I +KIREH++ +
Sbjct: 528 AGNLPLWLAPVQVAVMGISNNQDDYCKEVFTMLEKNGIRAKLDLRNEKIGFKIREHTLLR 587

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P ++I G  E  ++ I IR+       ++S+ D    L K+
Sbjct: 588 VPYLVILGKNEQEQKIITIRKHSGEDLGQMSVYDFCAFLDKQ 629


>gi|71898248|ref|ZP_00680422.1| Threonyl-tRNA synthetase, class IIa [Xylella fastidiosa Ann-1]
 gi|71731987|gb|EAO34044.1| Threonyl-tRNA synthetase, class IIa [Xylella fastidiosa Ann-1]
          Length = 635

 Score =  629 bits (1621), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 291/622 (46%), Positives = 419/622 (67%), Gaps = 17/622 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAING-KVCDLSDPVREGSI-EII 62
           I +T PDGS + F    +   V+ +I   LAK  +A  I+G  + D SD +   +I  II
Sbjct: 2   ITITLPDGSRREFEGPVSVMQVSHAIGPGLAKATIAGQIDGGHLVDASDLIEHDAILRII 61

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TPED  +L +IRHSCAH++  AV+ ++PE ++ IGP+I DGFYYD   ++PF+ ++LA I
Sbjct: 62  TPEDQEALEIIRHSCAHLVGHAVKQLYPEAKMVIGPVIADGFYYDIYSKRPFTPEDLAAI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESI-PAKENVTLYRQGEWFD 181
           E++M E+IA+D   +K   +      LF+ + E YK+ ++E + P    + +Y   E+ D
Sbjct: 122 EQRMVELIAQDYDVVKHITARHDVVRLFKERGEDYKLRLIEDMGPEVTAMGIYHHQEYVD 181

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           +CRGPHV +T +  K F+L +++GAYWRG++    L RIYGTAW  +++L  Y+  L+++
Sbjct: 182 MCRGPHVPNT-RFLKAFRLTRISGAYWRGNTKNEQLQRIYGTAWADKKQLEAYMQRLQDA 240

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVL 300
           EKRDHRK+ +  DLFH+ E+G G++FWH KGW I+QT+ +Y+RR  ++  Y E+  PQ+L
Sbjct: 241 EKRDHRKIGKAQDLFHLQEEGPGLVFWHPKGWVIWQTIENYIRRVYRNSGYGELRCPQIL 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D  LWQ+SGHWD+Y+ NMF       T  + RT+A+KPMNCPGHV VFN GL SYR+LP+
Sbjct: 301 DVSLWQKSGHWDNYKENMFF------TDSEKRTYAVKPMNCPGHVQVFNQGLHSYRDLPI 354

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R  EFG+ +RNEPSG+LHGL+RVRGFTQDD H+FCT+ Q+  E    H   + +Y DFGF
Sbjct: 355 RYGEFGACHRNEPSGALHGLLRVRGFTQDDGHIFCTEAQIEAEVTAFHRQALQVYADFGF 414

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           E I +K++ RP+KR+G    WD AE  ++  L   +   Q+      L GEGAFYGPK E
Sbjct: 415 ENIQIKIALRPDKRLGDSLSWDKAEAALRSALSACEVEWQE------LPGEGAFYGPKIE 468

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           Y LKDAIGR WQ GTIQVDF +P R  A YV+  S++ HPVM+HRA+ GS+ERFIGI+IE
Sbjct: 469 YHLKDAIGRTWQLGTIQVDFMMPGRLGAEYVDERSQRRHPVMLHRAIVGSMERFIGILIE 528

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           ++ G  P WL+P+Q ++  IT +  EYA+++   L +    +  D RNE I YKIREH++
Sbjct: 529 HYAGIWPTWLAPVQVVIANITDAQYEYAEQVHKALLNQGFRVNIDLRNEKIGYKIREHTL 588

Query: 601 KKIPIIIICGDKEASERSIGIR 622
           +++P +++ GD+E    ++ +R
Sbjct: 589 QRVPYLLVVGDREKENGTVAVR 610


>gi|165975675|ref|YP_001651268.1| threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
 gi|190149490|ref|YP_001968015.1| threonyl-tRNA synthetase ThrS [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|303251658|ref|ZP_07337831.1| threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|307251749|ref|ZP_07533652.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|307260677|ref|ZP_07542367.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           12 str. 1096]
 gi|307262809|ref|ZP_07544434.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           13 str. N273]
 gi|238687519|sp|B0BSM2|SYT_ACTPJ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|238692375|sp|B3H061|SYT_ACTP7 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|165875776|gb|ABY68824.1| threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
 gi|189914621|gb|ACE60873.1| threonyl-tRNA synthetase ThrS [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|302649500|gb|EFL79683.1| threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|306860750|gb|EFM92760.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|306869598|gb|EFN01385.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           12 str. 1096]
 gi|306871824|gb|EFN03543.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           13 str. N273]
          Length = 643

 Score =  629 bits (1621), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 291/619 (47%), Positives = 421/619 (68%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPE 65
           +T PDGS + F    +  +VA+SI   LAK  +A  +NG+  D  D + E  S+EIIT +
Sbjct: 4   ITLPDGSQRQFDNPVSVMEVAQSIGAGLAKATIAGRVNGERRDACDIISEDSSLEIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ ++P+V++AIGP I++GFYYD D ++  + ++L  IEK+
Sbjct: 64  DEDGLEIIRHSCAHLLGHAIKQLFPDVKMAIGPTIDNGFYYDVDLDRSLTQEDLDAIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K+ +S ++AR+ FE + E YK+ IL E+I       LY   E+ D+CR
Sbjct: 124 MLELAKTNYDVVKKRVSWQEARDTFEKRGEPYKMAILDENIERTATPALYHHEEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKL KVAGAYWRGDS   ML RIYGTAW  +++L +YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLQKVAGAYWRGDSKNKMLQRIYGTAWADKKQLAEYLTRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHR++ + +DL+H+ E+  G++FWH  GW IF+ L +++R K+K+ DY+E+  P ++D+ 
Sbjct: 243 DHRRIGKALDLYHMQEEAPGLVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW +Y   MF  +  +      R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWERTGHWQNYADLMFTTQSEN------REYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+ +E      ++  IY  FGF  I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQIESEVTSCIRMVYDIYSTFGFSNI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPE R+G DA+WD AE+ +   L      + + ++  +  GEGAFYGPK E+ L
Sbjct: 417 QVKLSTRPENRIGDDAMWDRAEDGLAKAL------TANGLSYEIQEGEGAFYGPKIEFAL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D + R+WQCGTIQ+DF LP R +A YV   + +  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 RDCLDREWQCGTIQLDFALPGRLDASYVAEDNGRRTPVMIHRAILGSIERFIGIITEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P QA+V  IT S  +Y Q++   L    +  ++D RNE + +K+REH+++++
Sbjct: 531 GFFPTWLAPTQAVVMNITDSQADYVQKVTKALSDAGIRAKSDLRNEKVGFKVREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++CGDKE     + +R
Sbjct: 591 PYMLVCGDKEIEAGKVSVR 609


>gi|238797380|ref|ZP_04640880.1| Threonyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
 gi|238718811|gb|EEQ10627.1| Threonyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
          Length = 642

 Score =  628 bits (1620), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 287/619 (46%), Positives = 424/619 (68%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D SD +  +  + IIT +
Sbjct: 4   ITLPDGSQRHYDHAISALDVALDIGPGLAKACIAGRVNGELVDASDLIESDAQLAIITTK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L ++RHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D ++  + ++L  +EK+
Sbjct: 64  DAEGLEILRHSCAHLLGHAIKQLWPDTKMAIGPVIDNGFYYDVDIDRTLTQEDLDLLEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+  +D   +K+ +S ++AR+ F ++ E YKV IL E+I   +  +LY   E+ D+CR
Sbjct: 124 MHELADKDYDVIKKKVSWQEARDTFAARGEDYKVAILDENISRDDRPSLYHHEEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKL K +GAYWRGDS   ML RIYGTAW  +++L  YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLQKTSGAYWRGDSKNKMLQRIYGTAWGDKKQLNAYLQRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF+ L +++R K+K+  Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELETFVRMKLKEYQYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW++Y  +MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWENYAEHMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  FGFEKI
Sbjct: 357 EFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQVRDEVNSCIKMVYDMYSTFGFEKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+GSD  W  AE+ +   L      +++ I      GEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEKRIGSDEQWTRAESDLAAAL------TENGIPFDYQPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF+LP R +A Y+  ++++  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 HDCLDRAWQCGTVQLDFSLPGRLSASYIGENNDRQVPVMIHRAILGSIERFIGILTEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+Q +V  IT S  +Y Q++   L+   +  + D RNE I +KIREH+++++
Sbjct: 531 GFFPTWLAPVQVVVMNITDSQSDYVQQVTKKLQDAGIRAKADLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++CGDKE     I +R
Sbjct: 591 PYMLVCGDKEVESGKIAVR 609


>gi|320173198|gb|EFW48409.1| Threonyl-tRNA synthetase [Shigella dysenteriae CDC 74-1112]
 gi|320185858|gb|EFW60609.1| Threonyl-tRNA synthetase [Shigella flexneri CDC 796-83]
 gi|332096305|gb|EGJ01306.1| threonyl-tRNA synthetase [Shigella boydii 3594-74]
          Length = 622

 Score =  628 bits (1620), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 291/601 (48%), Positives = 412/601 (68%), Gaps = 16/601 (2%)

Query: 25  DVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAE 83
           DVA  I   LAK  +A  +NG++ D  D +  +  + IIT +D   L +IRHSCAH++  
Sbjct: 2   DVALDIGPGLAKACIAGRVNGELVDACDLIENDAQLSIITAKDEEGLEIIRHSCAHLLGH 61

Query: 84  AVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSH 143
           A++ +WP  ++AIGP+I++GFYYD D ++  + +++  +EK+M E+  ++   +K+ +S 
Sbjct: 62  AIKQLWPHTKMAIGPVIDNGFYYDVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVSW 121

Query: 144 EKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMK 202
             ARE F ++ E+YKV IL E+I   +   LY   E+ D+CRGPHV +  +    FKLMK
Sbjct: 122 HAARETFANRGESYKVSILDENIAHDDKPGLYFHEEYVDMCRGPHVPNM-RFCHHFKLMK 180

Query: 203 VAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDG 262
            AGAYWRGDSN  ML RIYGTAW  ++ L  YL  LEE+ KRDHRK+ +++DL+H+ E+ 
Sbjct: 181 TAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEA 240

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
            G++FWH  GW IF+ L  ++R K+K+  Y+E+  P ++D+ LW+++GHWD+Y+  MF  
Sbjct: 241 PGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFT- 299

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
                T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+AEFGS +RNEPSGSLHGLM
Sbjct: 300 -----TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLM 354

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALW 441
           RVRGFTQDDAH+FCT+EQ+ +E      L+  +Y  FGFEKI+VKLSTRPEKR+GSD +W
Sbjct: 355 RVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEKIVVKLSTRPEKRIGSDEMW 414

Query: 442 DDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFN 501
           D AE  +   L+      ++ I     LGEGAFYGPK E+ L D + R WQCGT+Q+DF+
Sbjct: 415 DRAEADLAVALE------ENNIPFEYQLGEGAFYGPKIEFTLYDCLDRAWQCGTVQLDFS 468

Query: 502 LPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT 561
           LPSR +A YV   +E+  PVMIHRA+ GS+ERFIGI+ E F G  P WL+P+Q ++  IT
Sbjct: 469 LPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVIMNIT 528

Query: 562 SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
            S  EY  E+   L +  + ++ D RNE I +KIREH+++++P +++CGDKE     + +
Sbjct: 529 DSQSEYVNELTQKLSNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAV 588

Query: 622 R 622
           R
Sbjct: 589 R 589


>gi|330720856|gb|EGG99050.1| Threonyl-tRNA synthetase [gamma proteobacterium IMCC2047]
          Length = 639

 Score =  628 bits (1620), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 301/641 (46%), Positives = 430/641 (67%), Gaps = 30/641 (4%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPE 65
           +T PDGS ++F    +  +VA  I   LAK  V   +NG+  D+ D + + + + + TP+
Sbjct: 4   ITLPDGSQRSFENPVSVFEVASDIGPGLAKATVGATVNGEPADVHDVISDDAELVLFTPK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ +WP+ ++AIGP+IE+GFYYD D +   + +++  +EK+
Sbjct: 64  DDAGLEIIRHSCAHLLGHAIKQLWPDTKMAIGPVIENGFYYDVDLDHRITDEDMETLEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES-IPAKENVTLYRQGEWFDLCR 184
           M+E++      +K+ +S   A E+F  + E+YK++IL+  I   ++  LY   E+ D+CR
Sbjct: 124 MKELVKTQYDVIKKKVSWHDALEVFAERGESYKLQILQQDIDQSDSPGLYYHQEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +  + FKLM+V+GAYWRGDS+  ML RIYGTA+  +++L +YL FLEE+ KR
Sbjct: 184 GPHVPNM-RFCEHFKLMRVSGAYWRGDSDNKMLQRIYGTAFADKKQLKKYLNFLEEASKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQH 303
           DHRKLA+++DLFH+ E+  G++FWH KGW I+QT+  YMR+   D+ Y+EI TPQ++D  
Sbjct: 243 DHRKLAKKLDLFHLQEEAPGMVFWHAKGWSIYQTVEQYMRKVQHDNGYQEIKTPQLVDFS 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SGH D +   MF+    +      + +A+KPMNCP HV VFN GL+SYR+LP+RLA
Sbjct: 303 LWERSGHADKFGDEMFSSHSEN------KDYAVKPMNCPCHVQVFNQGLRSYRDLPLRLA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFG  +RNEPSG+L GLMRVRGF QDDAH+FC + Q+ +E     +L+ S+Y+DFGF+ +
Sbjct: 357 EFGCCHRNEPSGTLQGLMRVRGFVQDDAHIFCAESQIQDEVASFIDLLYSVYQDFGFDDV 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL----GEGAFYGPKF 479
           +VKLSTRPEKRVGSD +WD AE  ++  LD          N G+      GEGAFYGPK 
Sbjct: 417 LVKLSTRPEKRVGSDEVWDKAEEALQLALD----------NKGIAWELQPGEGAFYGPKI 466

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           E+ L+D +GR WQCGTIQVDF++P R +A YV     +  PVM+HRA+ GS ERFIGI+I
Sbjct: 467 EFSLRDCLGRVWQCGTIQVDFSMPGRLDAQYVAEDGSRQVPVMLHRAILGSFERFIGILI 526

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E+F G  P WL+P QA +  IT S  EY + +   L++    + +D RNE I +KIREHS
Sbjct: 527 EHFAGAFPAWLAPEQAAIVNITDSQAEYCRNVEKTLRNKGFRVFSDLRNEKIGFKIREHS 586

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
           I+KIP +++ GDKE     I +R      TQK   L ++ I
Sbjct: 587 IQKIPYVLVVGDKEMEAGQIAVR------TQKGEDLGSMSI 621


>gi|300818358|ref|ZP_07098568.1| threonyl-tRNA synthetase [Escherichia coli MS 107-1]
 gi|300821407|ref|ZP_07101554.1| threonyl-tRNA synthetase [Escherichia coli MS 119-7]
 gi|300525910|gb|EFK46979.1| threonyl-tRNA synthetase [Escherichia coli MS 119-7]
 gi|300528998|gb|EFK50060.1| threonyl-tRNA synthetase [Escherichia coli MS 107-1]
 gi|323158484|gb|EFZ44500.1| threonyl-tRNA synthetase [Escherichia coli E128010]
 gi|323175213|gb|EFZ60827.1| threonyl-tRNA synthetase [Escherichia coli LT-68]
 gi|323180497|gb|EFZ66042.1| threonyl-tRNA synthetase [Escherichia coli 1180]
 gi|323186265|gb|EFZ71617.1| threonyl-tRNA synthetase [Escherichia coli 1357]
          Length = 622

 Score =  628 bits (1620), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 291/601 (48%), Positives = 413/601 (68%), Gaps = 16/601 (2%)

Query: 25  DVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAE 83
           DVA  I   LAK  +A  +NG++ D  D +  +  + IIT +D   L +IRHSCAH++  
Sbjct: 2   DVALDIGPGLAKACIAGRVNGELVDACDLIENDAQLSIITAKDEDGLEIIRHSCAHLLGH 61

Query: 84  AVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSH 143
           A++ +WP  ++AIGP+I++GFYYD D ++  + +++  +EK+M E+  ++   +K+ +S 
Sbjct: 62  AIKQLWPHTKMAIGPVIDNGFYYDVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVSW 121

Query: 144 EKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMK 202
            +ARE F ++ E+YKV IL E+I   +   LY   E+ D+CRGPHV +  +    FKLMK
Sbjct: 122 HEARETFANRGESYKVSILDENIAHDDKPGLYFHEEYVDMCRGPHVPNM-RFCHHFKLMK 180

Query: 203 VAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDG 262
            AGAYWRGDSN  ML RIYGTAW  ++ L  YL  LEE+ KRDHRK+ +++DL+H+ E+ 
Sbjct: 181 TAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEA 240

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
            G++FWH  GW IF+ L  ++R K+K+  Y+E+  P ++D+ LW+++GHWD+Y+  MF  
Sbjct: 241 PGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFT- 299

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
                T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+AEFGS +RNEPSGSLHGLM
Sbjct: 300 -----TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLM 354

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALW 441
           RVRGFTQDDAH+FCT+EQ+ +E      L+  +Y  FGFEKI+VKLSTRPEKR+GSD +W
Sbjct: 355 RVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEKIVVKLSTRPEKRIGSDEMW 414

Query: 442 DDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFN 501
           D AE  +   L+      ++ I     LGEGAFYGPK E+ L D + R WQCGT+Q+DF+
Sbjct: 415 DRAEADLAVALE------ENNIPFEYQLGEGAFYGPKIEFTLYDCLDRAWQCGTVQLDFS 468

Query: 502 LPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT 561
           LPSR +A YV   +E+  PVMIHRA+ GS+ERFIGI+ E F G  P WL+P+Q ++  IT
Sbjct: 469 LPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVIMNIT 528

Query: 562 SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
            S  EY  E+   L +  + ++ D RNE I +KIREH+++++P +++CGDKE     + +
Sbjct: 529 DSQSEYVNELTQKLSNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAV 588

Query: 622 R 622
           R
Sbjct: 589 R 589


>gi|291617247|ref|YP_003519989.1| ThrS [Pantoea ananatis LMG 20103]
 gi|291152277|gb|ADD76861.1| ThrS [Pantoea ananatis LMG 20103]
          Length = 642

 Score =  628 bits (1620), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 284/619 (45%), Positives = 424/619 (68%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPE 65
           +T PDGS +++    +  D+A  I   LAK  +A  +NG++ D  DP+ +  S+ IIT +
Sbjct: 4   ITLPDGSQRSYDRPVSVMDIALDIGPGLAKACIAGRVNGELVDAVDPITDDASVAIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D ++  + +++  +EK+
Sbjct: 64  DEAGLEIIRHSCAHLLGHAIKQLWPDTKMAIGPVIDNGFYYDVDIDRTLTQEDIELLEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M ++   +   +K+ +S ++AR++F ++ E YK  IL E+I   +   LY   E+ D+CR
Sbjct: 124 MHQLAETNYDVVKKKVSWQEARDVFAARGEVYKTTILDENISHDDRPGLYHHEEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKL K++GAYWRGDS+  ML RIYGTAW  +++L  YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLQKISGAYWRGDSDNKMLQRIYGTAWADKKQLAAYLQRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF+ L  ++R K+K+  Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW++Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWENYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT++Q+  E      ++  +Y  FGFEKI
Sbjct: 357 EFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEDQLRTEVNSCIRMVYDMYSTFGFEKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+GSD  WD AE  +   L+      ++ I      GEGAFYGPK E+ L
Sbjct: 417 LVKLSTRPEKRIGSDETWDRAEEDLAAALN------ENNIEFEYQPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF+LP R +A YV  ++++  PVMIHRA+ GS+ERFIGI+ E F 
Sbjct: 471 YDCLDRAWQCGTVQLDFSLPKRLDATYVGENNDRQTPVMIHRAILGSMERFIGILTEEFA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+QA+V  IT    EY + +   L++  + ++ D RNE I +KIREH+++++
Sbjct: 531 GFFPSWLAPMQAVVMNITDGQAEYVETLTRKLQNAGIRVKADLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++CGDKE     + +R
Sbjct: 591 PYMLVCGDKEVEAGKVAVR 609


>gi|304397616|ref|ZP_07379493.1| threonyl-tRNA synthetase [Pantoea sp. aB]
 gi|304354788|gb|EFM19158.1| threonyl-tRNA synthetase [Pantoea sp. aB]
          Length = 642

 Score =  628 bits (1620), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 285/619 (46%), Positives = 423/619 (68%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPE 65
           +T PDGS + F    +  D+A  I   LAK  +A  +NG++ D  DP+ E  ++ IIT +
Sbjct: 4   ITLPDGSQRVFDRPVSVMDIAMDIGPGLAKACIAGRVNGELVDAVDPITEDAAVAIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D ++  + +++  +EK+
Sbjct: 64  DEAGLEIIRHSCAHLLGHAIKQLWPDTKMAIGPVIDNGFYYDVDIDRTLTQEDIDLLEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M ++   +   +K+ +S ++AR++F ++ E YK  IL E+I   +   LY   E+ D+CR
Sbjct: 124 MHQLAETNYDVVKKKVSWQEARDVFAARGEIYKTTILDENISHDDKPGLYHHEEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKL K++GAYWRGDS+  ML RIYGTAW  +++L  YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLQKISGAYWRGDSSNKMLQRIYGTAWADKKQLAAYLQRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF+ L  ++R K+K+  Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW++Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWENYKEAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSG+LHGLMRVRGFTQDDAHVFCT+EQ+ +E      ++  +Y  FGFEKI
Sbjct: 357 EFGSCHRNEPSGALHGLMRVRGFTQDDAHVFCTEEQVRDEVNSCIRMVYDMYSTFGFEKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+G+D +WD AE  +   L+      ++ I      GEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEKRIGTDEMWDRAEEDLAAALN------ENNIEFEFQPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF+LP R  A YV  ++++  PVMIHRA+ GS+ERFIGI+ E F 
Sbjct: 471 YDCLDRAWQCGTVQLDFSLPKRLEATYVGENNDRQTPVMIHRAILGSMERFIGILTEEFA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+Q +V  IT    EY + +   L++  + ++ D RNE I +KIREH+++++
Sbjct: 531 GFFPTWLAPLQVVVMNITDGQAEYVESLTRKLQNAGIRVKADLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++CGDKE     + +R
Sbjct: 591 PYMLVCGDKEVEAGKVAVR 609


>gi|194366578|ref|YP_002029188.1| threonyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3]
 gi|238693469|sp|B4SQH4|SYT_STRM5 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|194349382|gb|ACF52505.1| threonyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3]
          Length = 633

 Score =  628 bits (1620), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 292/644 (45%), Positives = 424/644 (65%), Gaps = 16/644 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I +T PDGS + F    +  DVA+SI   LAK  +A +++G + D SD +  + S+ IIT
Sbjct: 2   INITLPDGSRREFENPVSVMDVAQSIGAGLAKATIAGSVDGVLVDASDVIDHDASLRIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   + +IRHS AH++  AV+ ++P+V++ IGP+I +GFYYD   E+PF+ +++A IE
Sbjct: 62  AKDEEGVEIIRHSSAHLVGHAVKQLYPDVKMVIGPVIAEGFYYDIYSERPFTPEDMAAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-ENVTLYRQGEWFDL 182
           K+M E+IA+D   +K+     +  E+F+++ E YK+ ++E +    + + +Y   E+ D+
Sbjct: 122 KRMGELIAQDYDVIKKVTPRAEVIEIFKARGEDYKLRLIEDMSDDIQAMGMYYHQEYVDM 181

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +T +  K FKL +++GAYWRGD+    L RIYGTAW  +++L  Y+  +EE+E
Sbjct: 182 CRGPHVPNT-RFLKAFKLTRISGAYWRGDAQNEQLQRIYGTAWADKKQLEAYIKRIEEAE 240

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLD 301
            RDHR++ ++ DLFH+ E+  G++FWH KGW ++Q +  YMR+   K  Y E+  PQ+LD
Sbjct: 241 MRDHRRIGKQQDLFHLQEEAPGLVFWHPKGWALWQVVEQYMRKVYRKTGYGEVRCPQILD 300

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             LWQ+SGHWD+Y+  MF       T  + RT+ALKPMNCPGHV VFN GL SYR+LP+R
Sbjct: 301 VSLWQKSGHWDNYQDAMFF------TESEKRTYALKPMNCPGHVQVFNQGLHSYRDLPIR 354

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
             EFG+ +RNEPSG+LHG++RVRGFTQDD HVFCT+ Q+  E    H   +++Y+ FGF+
Sbjct: 355 YGEFGACHRNEPSGALHGILRVRGFTQDDGHVFCTENQVEAEVTAFHQQALAVYQHFGFD 414

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
           +I VK++ RPE R+G DA WD AE  ++  L      S + +    L GEGAFYGPK EY
Sbjct: 415 EIQVKIALRPESRLGDDATWDKAEGALRSAL------SSNGVEWQELPGEGAFYGPKIEY 468

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            LKDAIGR WQ GT+QVDF +P R  A YV+ +S+K HPVM+HRA+ GS+ERF+GI+IE+
Sbjct: 469 HLKDAIGRTWQLGTMQVDFMMPGRLGAEYVDENSQKKHPVMLHRAIVGSMERFLGILIEH 528

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G  P WL+P Q +V  IT +  EY  ++   L      +  D RNE I YKIREH+++
Sbjct: 529 HAGQFPAWLAPTQVVVANITDAQAEYVSDVTKTLADQGFRVSADLRNEKIGYKIREHTLQ 588

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           ++P +++ GD+E    ++ +R         +SL   I  L  E 
Sbjct: 589 RVPYLLVIGDREKENGAVAVRTRSGEDLGSMSLQAFIERLQAEG 632


>gi|332161611|ref|YP_004298188.1| threonyl-tRNA synthetase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325665841|gb|ADZ42485.1| threonyl-tRNA synthetase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
          Length = 642

 Score =  628 bits (1619), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 287/619 (46%), Positives = 425/619 (68%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + +    +  DVA  I   LAK  +A  +NG++ D SD +  +  + IIT +
Sbjct: 4   ITLPDGSQRQYDHAVSVLDVALDIGPGLAKACIAGRVNGELVDASDLIESDAQLAIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L ++RHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D ++  + ++L  +EK+
Sbjct: 64  DAEGLEILRHSCAHLLGHAIKQLWPDTKMAIGPVIDNGFYYDVDIDRTLTQEDLDLLEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+  +D   +K+ +S ++AR+ F ++ E YKV IL E+I   ++  LY   E+ D+CR
Sbjct: 124 MHELADKDYDVIKKKVSWQEARDTFAARGEDYKVAILDENISRDDHPGLYHHEEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKL K +GAYWRGDS   ML RIYGTAW+ +++L  YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLQKTSGAYWRGDSKNKMLQRIYGTAWSDKKQLNAYLQRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF+ L +++R K+K+  Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELETFVRMKLKEYQYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW++Y  +MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWENYAEHMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  FGFEKI
Sbjct: 357 EFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQVRDEVNSCIKMVYDMYSTFGFEKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+GSD LW  AE+ +   L      +++ I      GEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEKRIGSDDLWTRAEDDLAAAL------TENGIPFDYQPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF+LP R +A Y+  ++++  PVMIHRA+ GS+ERFIGI+ E + 
Sbjct: 471 HDCLDRAWQCGTVQLDFSLPGRLSASYIGENNDRQVPVMIHRAILGSMERFIGILTEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+Q +V  IT S  +Y Q++   L+   +  + D RNE I +KIREH+++++
Sbjct: 531 GFFPTWLAPVQVVVMNITDSQSDYVQQVTKKLQDAGIRAKADLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++CGDKE     I +R
Sbjct: 591 PYMLVCGDKEVESGKIAVR 609


>gi|319897020|ref|YP_004135215.1| threonyl-tRNA synthetase [Haemophilus influenzae F3031]
 gi|317432524|emb|CBY80883.1| threonyl-tRNA synthetase [Haemophilus influenzae F3031]
          Length = 643

 Score =  628 bits (1619), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 290/619 (46%), Positives = 420/619 (67%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS + F    +  +VA+ I   LAK  +A  +NG+  D  D + ++ ++EIIT +
Sbjct: 4   ITLPDGSQRQFDRPVSVLEVAQDIGAGLAKATIAGRVNGERRDACDVIEQDATLEIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ ++P V++AIGP IE+GFYYD D ++  + +++  IEK+
Sbjct: 64  DEDGLEIIRHSCAHLLGHAIKQLFPNVKMAIGPTIENGFYYDVDLDRSLTQEDIDAIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K+ ++ ++AR+ FE + E YK+ IL E+I       LY   E+ D+CR
Sbjct: 124 MLELAKTNYDVVKKRVTWQEARDTFEKRGEPYKMAILDENIERTATPALYHHLEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +  + FKL KVAGAYWRGDS   ML RIYGTAW  +++L +YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCQHFKLQKVAGAYWRGDSKNKMLQRIYGTAWADKKQLAEYLTRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ + +DL+H+ E+  G++FWH  GW IF+ L +++R K+K  DY+E+  P ++D+ 
Sbjct: 243 DHRKIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW +Y   MF  +  +      R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWQNYADLMFTTQSEN------REYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+ +E      ++  IY  FGF  I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQIESEVTSCIKMVYDIYSTFGFTNI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPE R+GSD +WD      +         + + +   +  GEGAFYGPK E+ L
Sbjct: 417 AVKLSTRPENRIGSDEMWD------RAEGGLAAALAHNGLEYEIQEGEGAFYGPKIEFAL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D +GR+WQCGT+Q+DF LP R +A YV   + +  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 RDCLGREWQCGTVQLDFALPGRLDATYVAEDNNRKTPVMIHRAILGSIERFIGIITEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P QA+V  IT S  +Y Q++A  L    L ++TD RNE + +KIREH+++++
Sbjct: 531 GFFPAWLAPTQAVVMNITDSQADYVQKVAKQLSDVGLRVKTDLRNEKVGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++CGDKE +E  + +R
Sbjct: 591 PYMLVCGDKEIAEGKVAVR 609


>gi|86147528|ref|ZP_01065839.1| threonyl-tRNA synthetase [Vibrio sp. MED222]
 gi|85834696|gb|EAQ52843.1| threonyl-tRNA synthetase [Vibrio sp. MED222]
          Length = 642

 Score =  628 bits (1619), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 301/642 (46%), Positives = 425/642 (66%), Gaps = 17/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  DVA SI   LAK  +A  ++G+  D  D +  + S+EIIT +
Sbjct: 4   ITLPDGSQRQFDNPVSTLDVALSIGPGLAKATIAGRVDGERVDACDLIENDASLEIITAK 63

Query: 66  DP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  A++ ++PE ++AIGP I++GFYYD D E   + ++L +IEK
Sbjct: 64  DEVDGLEIVRHSCAHLLGHAIKQLFPEAKMAIGPTIDNGFYYDIDLEHSLTQEDLEKIEK 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLC 183
           +M+E+       +K+ +S ++AR+ FE++ E YK+EIL E++   +   LY   E+ D+C
Sbjct: 124 RMKELAKTKYQVVKKKVSWQEARDAFEARGETYKIEILDENVSKDDRPGLYHHEEYIDMC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV   G  + F  L+ VAGAYWRG+S+  ML RIYGTA++ ++    +L  LEE+ K
Sbjct: 184 RGPHVPHMGFCQHF-TLLNVAGAYWRGNSDNKMLQRIYGTAFHDKKAFKAHLVRLEEAAK 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRK+ + +DLFH+ ++  G++FWH  GW IF+ L  ++R+K+ + DY+E+  P ++D+
Sbjct: 243 RDHRKIGKHLDLFHMQQEAPGMVFWHHNGWTIFRELEVFIRQKLTEYDYQEVKGPLMMDR 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+
Sbjct: 303 VLWERSGHWDKYAEAMFT------TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRM 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHG+MRVRGFTQDDAHVFCT++Q+  E      ++   Y  FGFE 
Sbjct: 357 AEFGSCHRNEPSGALHGIMRVRGFTQDDAHVFCTEDQVQQEVKACIEMVYDTYTTFGFEN 416

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+VKLSTRPE+RVGSD +WD AE  +K  L+ ++      I   +  GEGAFYGPK E+ 
Sbjct: 417 IVVKLSTRPEQRVGSDEMWDRAEADLKQALEAME------IAYEIQEGEGAFYGPKIEFT 470

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D + R WQCGT+Q+DF LP R  A YV   +E+  PVMIHRA+ GS+ERFIGI+IE +
Sbjct: 471 LHDCLDRAWQCGTVQLDFALPERLGATYVGEDNERHTPVMIHRAILGSLERFIGILIEEY 530

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P QAIV  IT    EY QEIA  L+     ++ D RNE I +KIREH++K+
Sbjct: 531 AGFFPTWLAPEQAIVMGITDKQSEYVQEIAKKLQKSGFRVKADLRNEKIGFKIREHTLKR 590

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P +++CGD+E     I +R        K  + D I  +  E
Sbjct: 591 VPFMLVCGDQEMEAGEIAVRTRKGKDLGKFKVDDFISYIQAE 632


>gi|238787089|ref|ZP_04630889.1| Threonyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
 gi|238724877|gb|EEQ16517.1| Threonyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
          Length = 642

 Score =  628 bits (1619), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 288/619 (46%), Positives = 423/619 (68%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + +    +  DVA  I   LAK  +A  +NG++ D SD +  +  + IIT +
Sbjct: 4   ITLPDGSQRQYDHAVSVLDVALDIGPGLAKACIAGRVNGELVDASDLIESDAQLAIITTK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L ++RHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D ++  + ++L  +EK+
Sbjct: 64  DAEGLEILRHSCAHLLGHAIKQLWPDTKMAIGPVIDNGFYYDVDIDRTLTQEDLDLLEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+  +D   +K+ +S ++AR+ F ++ E YKV IL E+I   +   LY   E+ D+CR
Sbjct: 124 MHELADKDYDVIKKKVSWQEARDTFAARGEDYKVAILDENISRDDRPGLYHHEEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKL K +GAYWRGDS   ML RIYGTAW  +++L  YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLQKTSGAYWRGDSKNKMLQRIYGTAWGDKKQLNAYLQRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF+ L +++R K+K+  Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKEYQYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW++Y  +MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWENYAEHMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSG+LHGLMRVRGFTQDDAHVFCT+EQ+ +E      ++  +Y  FGFEKI
Sbjct: 357 EFGSCHRNEPSGALHGLMRVRGFTQDDAHVFCTEEQVRDEVNSCIKMVYDMYSTFGFEKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+GSD LW  AE+ +   L      +++ I      GEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEKRIGSDDLWTRAEDDLAAAL------TENGIPFDYQPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF+LP R +A Y+  ++++  PVMIHRA+ GS+ERFIGI+ E + 
Sbjct: 471 HDCLDRAWQCGTVQLDFSLPGRLSASYIGENNDRQVPVMIHRAILGSMERFIGILTEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+Q +V  IT S  +Y Q++   L+   +  + D RNE I +KIREH+++++
Sbjct: 531 GFFPTWLAPVQVVVMNITDSQSDYVQQVTKKLQDAGIRAKADLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++CGDKE     I +R
Sbjct: 591 PYMLVCGDKEVESGKIAVR 609


>gi|254373138|ref|ZP_04988627.1| threonine-tRNA ligase [Francisella tularensis subsp. novicida
           GA99-3549]
 gi|151570865|gb|EDN36519.1| threonine-tRNA ligase [Francisella novicida GA99-3549]
          Length = 634

 Score =  628 bits (1619), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 302/642 (47%), Positives = 426/642 (66%), Gaps = 16/642 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           I + FPDGSI+ F       DVA+SIS SLAK  VA  I+ ++ D  D +     + +IT
Sbjct: 2   INIRFPDGSIREFEAGVNSLDVAKSISPSLAKATVAAYIDDQLKDAKDAINSNCELRLIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +DP  L ++RHSCAH++A AV+ ++P  +V IGP++++GFYYDF  ++     +L  IE
Sbjct: 62  VKDPEGLEILRHSCAHLLAHAVKELYPNTEVTIGPVVDNGFYYDFSFKESIGEADLPTIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           KKM+E+  + +P   + +   +A E F+++ E YKVEI++SI A E V +Y Q  + DLC
Sbjct: 122 KKMKELAKKSAPVSYRVVPKAEAIEFFKAQGENYKVEIIDSI-ADEQVKIYTQDNFSDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ +T  V K FKL K+AGAYWRG+S+  ML+RIYGT W T+++L QYL  LEE+EK
Sbjct: 181 RGPHIPNTS-VLKAFKLTKLAGAYWRGNSDNEMLTRIYGTCWATKEDLEQYLNMLEEAEK 239

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQ 302
           RDHRK+ + +DLFH  ED  G+ FWH  G +I++ +  YMR    K    EI TP + D 
Sbjct: 240 RDHRKIGKVLDLFHFQEDSPGIAFWHDNGVRIWRQVEDYMRASNNKYGCSEIRTPLIADF 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LWQ+SGH   Y  NMFA K  +      R FA++PMNCP  V V+N  L SYR+LP+R+
Sbjct: 300 SLWQKSGHASKYAENMFATKSEN------RDFAIRPMNCPTCVQVYNTKLHSYRDLPIRM 353

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFG V+RNEPSGSLHGL+RVR FTQDD H+FCT EQ+  E + +      +YKDFGF  
Sbjct: 354 AEFGIVHRNEPSGSLHGLLRVRSFTQDDGHIFCTPEQVEEEVILMVQQCFEVYKDFGFND 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             VK++ RPE R+G D  WD +E ++K  LD       + ++  +L GEGAFYGPK E+ 
Sbjct: 414 FAVKIALRPENRIGDDETWDKSEQMLKNALDA------NNVSYELLPGEGAFYGPKIEFH 467

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LKDAIGR WQCGTIQ+DF++P R  A Y++ + EK  PVM+HRA+ GS+ERFIG++IE++
Sbjct: 468 LKDAIGRSWQCGTIQLDFSMPQRLGATYIDKNGEKQVPVMLHRAIVGSLERFIGMLIEHY 527

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            GNLPLWL+P+Q  V  I+++  +Y +E+  +L+ + +  + D RNE I +KIREH++ +
Sbjct: 528 AGNLPLWLAPVQVAVMGISNNQDDYCKEVFTMLEKNGIRAKLDLRNEKIGFKIREHTLLR 587

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P ++I G  E  ++ I IR+       ++S+ D    L K+
Sbjct: 588 VPYLVILGKNEQEQKIITIRKHSGEDLGQMSVDDFCAFLDKQ 629


>gi|148826837|ref|YP_001291590.1| threonyl-tRNA synthetase [Haemophilus influenzae PittGG]
 gi|166223345|sp|A5UEK1|SYT_HAEIG RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|148718079|gb|ABQ99206.1| threonyl-tRNA synthetase [Haemophilus influenzae PittGG]
          Length = 643

 Score =  628 bits (1619), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 290/619 (46%), Positives = 421/619 (68%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS + F    +  +VA+ I   LAK  +A  +NG+  D  D + ++ ++EIIT +
Sbjct: 4   ITLPDGSQRQFDNPVSVLEVAQDIGAGLAKATIAGRVNGERHDACDIIEQDATLEIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ ++P+V++AIGP IE+GFYYD D ++  + +++  IEK+
Sbjct: 64  DEDGLEIIRHSCAHLLGHAIKQLFPDVKMAIGPTIENGFYYDVDLDRSLTQEDIDAIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K+ ++ ++AR+ FE + E YK+ IL E+I       LY   E+ D+CR
Sbjct: 124 MLELAKTNYDVVKKRVTWQEARDTFEKRGEPYKMAILDENIERTAMPALYHHLEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +  + FKL KVAGAYWRGDS   ML RIYGTAW  +++L +YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCQHFKLQKVAGAYWRGDSKNKMLQRIYGTAWADKKQLAEYLTRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ + +DL+H+ E+  G++FWH  GW IF+ L +++R K+K  DY+E+  P ++D+ 
Sbjct: 243 DHRKIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW +Y   MF  +  +      R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWQNYADLMFTTQSEN------REYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+ +E      ++  IY  FGF  I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQIESEVTSCIKMVYDIYSTFGFTNI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPE R+GSD +WD      +         + + +   +  GEGAFYGPK E+ L
Sbjct: 417 AVKLSTRPENRIGSDEMWD------RAEAGLAAALAHNGLEYEIQEGEGAFYGPKIEFAL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D +GR+WQCGT+Q+DF LP R +A YV   + +  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 RDCLGREWQCGTVQLDFALPGRLDATYVAEDNSRKTPVMIHRAILGSIERFIGIITEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P QA+V  IT S  +Y Q++A  L    L ++TD RNE + +KIREH+++++
Sbjct: 531 GFFPAWLAPTQAVVMNITDSQADYVQKVAKQLSDVGLRVKTDLRNEKVGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++CGDKE +E  + +R
Sbjct: 591 PYMLVCGDKEIAEGKVAVR 609


>gi|308186646|ref|YP_003930777.1| Threonyl-tRNA synthetase [Pantoea vagans C9-1]
 gi|308057156|gb|ADO09328.1| Threonyl-tRNA synthetase [Pantoea vagans C9-1]
          Length = 642

 Score =  628 bits (1619), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 284/619 (45%), Positives = 424/619 (68%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPE 65
           +T PDGS + F    +  D+A  I   LAK  +A  +NG++ D +DP+ +  ++ IIT +
Sbjct: 4   ITLPDGSQRVFDRPVSVMDIALDIGPGLAKACIAGRVNGELVDAADPITDDAAVAIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D ++  + +++  +EK+
Sbjct: 64  DEAGLEIIRHSCAHLLGHAIKQLWPDTKMAIGPVIDNGFYYDVDIDRTLTQEDIDLLEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M ++   +   +K+ +S ++AR++F ++ E YK  IL E+I   +   LY   E+ D+CR
Sbjct: 124 MHQLAETNYDVVKKKVSWQEARDVFAARGEIYKTTILDENISHDDKPGLYHHEEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKL K++GAYWRGDS+  ML RIYGTAW  +++L  YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLQKISGAYWRGDSSNKMLQRIYGTAWADKKQLAAYLQRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF+ L  ++R K+K+  Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW++Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWENYKEAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSG+LHGLMRVRGFTQDDAHVFCT+EQ+ +E      ++  +Y  FGFEKI
Sbjct: 357 EFGSCHRNEPSGALHGLMRVRGFTQDDAHVFCTEEQVRDEVNSCIRMVYDMYSTFGFEKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+G+D +WD AE  +   L+      ++ I      GEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEKRIGTDEMWDRAEEDLAAALN------ENNIEFEFQPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF+LP R  A YV  ++++  PVMIHRA+ GS+ERFIGI+ E F 
Sbjct: 471 YDCLDRAWQCGTVQLDFSLPKRLEATYVGENNDRQTPVMIHRAILGSMERFIGILTEEFA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+Q +V  IT    EY + +   L++  + ++ D RNE I +KIREH+++++
Sbjct: 531 GFFPTWLAPLQVVVMNITDGQAEYVESLTRKLQNAGIRVKADLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++CGDKE     + +R
Sbjct: 591 PYMLVCGDKEVESGKVAVR 609


>gi|251792477|ref|YP_003007203.1| threonyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
 gi|247533870|gb|ACS97116.1| threonyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
          Length = 643

 Score =  628 bits (1619), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 297/641 (46%), Positives = 430/641 (67%), Gaps = 16/641 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPE 65
           +T PDGS + F    T  +VA++I   LAK  +A  +NG+  D  D + E  S+EIIT +
Sbjct: 4   ITLPDGSQRQFDKPVTVLEVAQNIGAGLAKATIAGRVNGERKDACDLITEDSSLEIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHS AH++  A++ ++P+V++AIGP I++GFYYD D ++  + +++  +EK 
Sbjct: 64  DEDGLEIIRHSTAHLLGHAIKQLFPDVKMAIGPTIDNGFYYDVDLDRSLTQEDIDALEKH 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K  +S ++AR+ FE + E YK+ IL E+I       LY   E+ D+CR
Sbjct: 124 MLELAKTNYDVIKTPVSWQEARDTFEKRGEPYKMAILDENIERTATPALYHHQEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKL K+AGAYWRGDS   ML RIYGTAW  +++L  YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLQKIAGAYWRGDSKNKMLQRIYGTAWADKKQLDAYLQRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ + +DL+H+ E+  G++FWH  GW IF+ L +++R K+K  DY+E+  P ++D+ 
Sbjct: 243 DHRKIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW +Y   MF  +  +      R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWQNYGDLMFTTQSEN------REYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+ +E      ++  IY  FGF  I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQIESEVTSCIRMVYDIYSTFGFTNI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPEKR+G+D +WD AE   +G+ + +K++    +   +  GEGAFYGPK E+ L
Sbjct: 417 FVKLSTRPEKRIGADDMWDCAE---EGLANALKHNG---LEYEIQEGEGAFYGPKIEFAL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D + R+WQCGTIQ+DF LP R NA YV   +++  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 RDCLDREWQCGTIQLDFALPGRLNASYVAEDNDRRTPVMIHRAILGSIERFIGIITEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P QA+V  IT S  EY Q++A  L    L ++TD RNE + +KIREH+++++
Sbjct: 531 GFFPAWLAPTQAVVMNITDSQSEYVQDVAKKLSDAGLRVKTDLRNEKVGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P +++CGDKE     + +R          ++ + + +L K+
Sbjct: 591 PYMLVCGDKEIETGKVAVRTRKGQDLGTFTVEEFLDVLKKQ 631


>gi|118497781|ref|YP_898831.1| threonyl-tRNA synthetase [Francisella tularensis subsp. novicida
           U112]
 gi|194323753|ref|ZP_03057529.1| threonyl-tRNA synthetase [Francisella tularensis subsp. novicida
           FTE]
 gi|208779844|ref|ZP_03247188.1| threonyl-tRNA synthetase [Francisella novicida FTG]
 gi|166223342|sp|A0Q762|SYT_FRATN RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|118423687|gb|ABK90077.1| threonyl-tRNA synthetase [Francisella novicida U112]
 gi|194322117|gb|EDX19599.1| threonyl-tRNA synthetase [Francisella tularensis subsp. novicida
           FTE]
 gi|208744299|gb|EDZ90599.1| threonyl-tRNA synthetase [Francisella novicida FTG]
          Length = 634

 Score =  628 bits (1619), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 302/642 (47%), Positives = 426/642 (66%), Gaps = 16/642 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           I + FPDGSI+ F       DVA+SIS SLAK  VA  I+ ++ D  D +     + +IT
Sbjct: 2   INIRFPDGSIREFEAGVNSLDVAKSISPSLAKATVAAYIDDQLKDAKDAINSNCELRLIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +DP  L ++RHSCAH++A AV+ ++P  +V IGP++++GFYYDF  ++     +L  IE
Sbjct: 62  VKDPEGLEILRHSCAHLLAHAVKELYPSTEVTIGPVVDNGFYYDFSFKESIGEADLPTIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           KKM+E+  + +P   + +   +A E F+++ E YKVEI++SI A E V +Y Q  + DLC
Sbjct: 122 KKMKELAKKSAPVSYRVVPKAEAIEFFKAQGENYKVEIIDSI-ADEQVKIYTQDNFSDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ +T  V K FKL K+AGAYWRG+S+  ML+RIYGT W T+++L QYL  LEE+EK
Sbjct: 181 RGPHIPNTS-VLKAFKLTKLAGAYWRGNSDNEMLTRIYGTCWATKEDLEQYLNMLEEAEK 239

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQ 302
           RDHRK+ + +DLFH  ED  G+ FWH  G +I++ +  YMR    K    EI TP + D 
Sbjct: 240 RDHRKIGKVLDLFHFQEDSPGIAFWHDNGVRIWRQVEDYMRASNNKYGCSEIRTPLIADF 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LWQ+SGH   Y  NMFA K  +      R FA++PMNCP  V V+N  L SYR+LP+R+
Sbjct: 300 SLWQKSGHASKYAENMFATKSEN------RDFAIRPMNCPTCVQVYNTKLHSYRDLPIRM 353

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFG V+RNEPSGSLHGL+RVR FTQDD H+FCT EQ+  E + +      +YKDFGF  
Sbjct: 354 AEFGIVHRNEPSGSLHGLLRVRSFTQDDGHIFCTPEQVEEEVILMVQQCFEVYKDFGFND 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             VK++ RPE R+G D  WD +E ++K  LD       + ++  +L GEGAFYGPK E+ 
Sbjct: 414 FAVKIALRPENRIGDDETWDKSEQMLKNALDA------NNVSYELLPGEGAFYGPKIEFH 467

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LKDAIGR WQCGTIQ+DF++P R  A Y++ + EK  PVM+HRA+ GS+ERFIG++IE++
Sbjct: 468 LKDAIGRSWQCGTIQLDFSMPQRLGATYIDKNGEKQVPVMLHRAIVGSLERFIGMLIEHY 527

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            GNLPLWL+P+Q  V  I+++  +Y +E+  +L+ + +  + D RNE I +KIREH++ +
Sbjct: 528 AGNLPLWLAPVQVAVMGISNNQDDYCKEVFTMLEKNGIRAKLDLRNEKIGFKIREHTLLR 587

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P ++I G  E  ++ I IR+       ++S+ D    L K+
Sbjct: 588 VPYLVILGKNEQEQKIITIRKHSGEDLGQMSVDDFCAFLDKQ 629


>gi|322514773|ref|ZP_08067797.1| threonine--tRNA ligase [Actinobacillus ureae ATCC 25976]
 gi|322119269|gb|EFX91397.1| threonine--tRNA ligase [Actinobacillus ureae ATCC 25976]
          Length = 653

 Score =  628 bits (1619), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 294/625 (47%), Positives = 423/625 (67%), Gaps = 19/625 (3%)

Query: 4   DIKL---TFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSI 59
           DIK+   T PDGS + F    +  +VA+SI   LAK  +A  +NG+  D  D + E  S+
Sbjct: 8   DIKMPIITLPDGSQRQFDNPVSVMEVAQSIGAGLAKATIAGRVNGERRDACDIISEDSSL 67

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT +D   L +IRHSCAH++  A++ ++P+V++AIGP I++GFYYD D ++  + ++L
Sbjct: 68  EIITAKDEDGLEIIRHSCAHLLGHAIKQLFPDVKMAIGPTIDNGFYYDVDLDRSLTQEDL 127

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             IEK+M E+   +   +K+ +S + AR+ FE + E YK+ IL E+I       LY   E
Sbjct: 128 DAIEKRMLELAKTNYDVMKKRVSWQDARDTFEKRGEPYKMAILDENIERTAMPALYHHEE 187

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +  +    FKL KVAGAYWRGDS   ML RIYGTAW  +++L +YL  L
Sbjct: 188 YIDMCRGPHVPNM-RFCHHFKLQKVAGAYWRGDSKNKMLQRIYGTAWADKKQLAEYLTRL 246

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHR++ + +DL+H+ E+  G++FWH  GW IF+ L +++R K+K+ DY+E+  P
Sbjct: 247 EEAAKRDHRRIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGP 306

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW+++GHW +Y   MF  +  +      R +A+KPMNCPGHV +FN GLKSYR+
Sbjct: 307 FMMDRVLWERTGHWQNYADLMFTTQSEN------REYAIKPMNCPGHVQIFNQGLKSYRD 360

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+ +E      ++  IY  
Sbjct: 361 LPIRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQIESEVTSCIKMVYDIYST 420

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF  I VKLSTRPE R+G DA+WD AE+ +   L      + + ++  +  GEGAFYGP
Sbjct: 421 FGFSNIQVKLSTRPENRIGDDAMWDRAEDGLAKAL------TANGLSYEIQEGEGAFYGP 474

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L+D + R+WQCGTIQ+DF LP R +A YV   + +  PVMIHRA+ GSIERFIGI
Sbjct: 475 KIEFALRDCLDREWQCGTIQLDFALPGRLDASYVAEDNGRRTPVMIHRAILGSIERFIGI 534

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E + G  P WL+P QA+V  IT S  +Y Q++   L    +  ++D RNE + +K+RE
Sbjct: 535 ITEEYAGFFPTWLAPTQAVVMNITDSQADYVQKVTKALSDAGIRAKSDLRNEKVGFKVRE 594

Query: 598 HSIKKIPIIIICGDKEASERSIGIR 622
           H+++++P +++CGDKE     + +R
Sbjct: 595 HTLRRVPYMLVCGDKEIEAGKVSVR 619


>gi|292488129|ref|YP_003531006.1| threonyl-tRNA synthetase [Erwinia amylovora CFBP1430]
 gi|292899340|ref|YP_003538709.1| threonyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
 gi|291199188|emb|CBJ46302.1| threonyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
 gi|291553553|emb|CBA20598.1| Threonyl-tRNA synthetase [Erwinia amylovora CFBP1430]
 gi|312172261|emb|CBX80518.1| Threonyl-tRNA synthetase [Erwinia amylovora ATCC BAA-2158]
          Length = 642

 Score =  627 bits (1618), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 290/641 (45%), Positives = 429/641 (66%), Gaps = 16/641 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS ++F    +  D+A  I   LAK  +A  +NG++ D  DP+  + S+ IIT +
Sbjct: 4   ITLPDGSQRSFDHAVSVMDIALDIGPGLAKACIAGRVNGELVDAVDPITADASVAIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D ++  + +++  +EK+
Sbjct: 64  DEVGLEIIRHSCAHLLGHAIKQLWPDTKMAIGPVIDNGFYYDVDLDRTLTQEDIELLEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M ++   +   +K+ +S ++A + F ++ E YK+ IL E+I   +   LY   E+ D+CR
Sbjct: 124 MHQLAETNYDVIKKTVSWQEAHDAFAARGENYKMTILDENISHDDRPGLYHHQEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKL K++GAYWRGDSN  ML RIYGTAW  +++L  YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLQKISGAYWRGDSNNKMLQRIYGTAWADKKQLAAYLLRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF+ L  ++R K+K+ +Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRTKLKEYEYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW++Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWENYKEAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  FGFEKI
Sbjct: 357 EFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQVRDEVNSCIKMVYDMYSTFGFEKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+GSD LWD +E  +   L       ++ I      GEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEKRIGSDELWDRSETDLAAAL------KENGIPFEYQPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF+LP R +A YV   +E+  PVMIHRA+ GS+ERFIGI+ E + 
Sbjct: 471 HDCLDRAWQCGTVQLDFSLPGRLSASYVGESNERQVPVMIHRAILGSMERFIGILTEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+Q +V  IT    EY  E+   L++  +  + D RNE I +KIREH+++++
Sbjct: 531 GFFPTWLAPLQVVVMNITDGQSEYVAELTRKLQNAGIRAKADLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P +++CGDKE     + +R         + + +AI  L  E
Sbjct: 591 PYMLVCGDKEVEAGKVAVRTRRGKDLGSIDVNEAIAKLQDE 631


>gi|327393701|dbj|BAK11123.1| Threonyl-tRNA synthetase ThrS [Pantoea ananatis AJ13355]
          Length = 642

 Score =  627 bits (1618), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 284/619 (45%), Positives = 424/619 (68%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPE 65
           +T PDGS +++    +  D+A  I   LAK  +A  +NG++ D  DP+ +  S+ IIT +
Sbjct: 4   ITLPDGSQRSYDRPVSVMDIALDIGPGLAKACIAGRVNGELVDAVDPITDDASVAIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D ++  + +++  +EK+
Sbjct: 64  DEAGLEIIRHSCAHLLGHAIKQLWPDTKMAIGPVIDNGFYYDVDIDRTLTQEDIELLEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M ++   +   +K+ +S ++AR++F ++ E YK  IL E+I   +   LY   E+ D+CR
Sbjct: 124 MHQLAETNYDVVKKKVSWQEARDVFAARGEVYKTTILDENISHDDRPGLYHHEEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKL K++GAYWRGDS+  ML RIYGTAW  +++L  YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLQKISGAYWRGDSDNKMLQRIYGTAWADKKQLAAYLQRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF+ L  ++R K+K+  Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW++Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWENYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT++Q+  E      ++  +Y  FGFEKI
Sbjct: 357 EFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEDQLRTEVNSCIRMVYDMYSTFGFEKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+GSD  WD AE  +   L+      ++ I      GEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEKRIGSDETWDRAEEDLAAALN------ENNIEFEYQPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF+LP R +A YV  ++++  PVMIHRA+ GS+ERFIGI+ E F 
Sbjct: 471 YDCLDRAWQCGTVQLDFSLPKRLDATYVGENNDRQTPVMIHRAILGSMERFIGILTEEFA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+QA+V  IT    EY + +   L++  + ++ D RNE I +KIREH+++++
Sbjct: 531 GFFPSWLAPMQAVVMNITDGQAEYVETLTRKLQNAGIRVKADLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++CGDKE     + +R
Sbjct: 591 PYMLVCGDKEVEAGKVAVR 609


>gi|300904575|ref|ZP_07122412.1| threonyl-tRNA synthetase [Escherichia coli MS 84-1]
 gi|300403488|gb|EFJ87026.1| threonyl-tRNA synthetase [Escherichia coli MS 84-1]
 gi|315257476|gb|EFU37444.1| threonyl-tRNA synthetase [Escherichia coli MS 85-1]
          Length = 622

 Score =  627 bits (1618), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 290/601 (48%), Positives = 413/601 (68%), Gaps = 16/601 (2%)

Query: 25  DVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAE 83
           DVA  I   LAK  +A  +NG++ D  D +  +  + IIT +D   L +IRHSCAH++  
Sbjct: 2   DVALDIGPGLAKACIAGRVNGELVDACDLIENDAQLSIITAKDEEGLEIIRHSCAHLLGH 61

Query: 84  AVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSH 143
           A++ +WP  ++AIGP+I++GFYYD D ++  + +++  +EK+M E+  ++   +K+ +S 
Sbjct: 62  AIKQLWPHTKMAIGPVIDNGFYYDVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVSW 121

Query: 144 EKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMK 202
            +ARE F ++ E+YKV IL E+I   +   LY   E+ D+CRGPHV +  +    FKLMK
Sbjct: 122 HEARETFANRGESYKVSILDENIAHDDKPGLYFHEEYVDMCRGPHVPNM-RFCHHFKLMK 180

Query: 203 VAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDG 262
            AGAYWRGDSN  ML RIYGTAW  ++ L  YL  LEE+ KRDHRK+ +++DL+H+ E+ 
Sbjct: 181 TAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEA 240

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
            G++FWH  GW IF+ L  ++R K+K+  Y+E+  P ++D+ LW+++GHWD+Y+  MF  
Sbjct: 241 PGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFT- 299

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
                T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+AEFGS +RNEPSGSLHGLM
Sbjct: 300 -----TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLM 354

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALW 441
           RVRGFTQDDAH+FCT+EQ+ +E      L+  +Y  FGFEKI+VKLSTRPEKR+GSD +W
Sbjct: 355 RVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEKIVVKLSTRPEKRIGSDEMW 414

Query: 442 DDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFN 501
           D AE  +   L+      ++ I     LGEGAFYGPK E+ L D + R WQCGT+Q+DF+
Sbjct: 415 DRAEADLAVALE------ENNIPFEYQLGEGAFYGPKIEFTLYDCLDRAWQCGTVQLDFS 468

Query: 502 LPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT 561
           LPSR +A YV   +E+  PVMIHRA+ GS+ERFIGI+ E F G  P WL+P+Q ++  IT
Sbjct: 469 LPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVIMNIT 528

Query: 562 SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
            S  +Y  E+   L +  + ++ D RNE I +KIREH+++++P +++CGDKE     + +
Sbjct: 529 DSQSDYVNELTQKLSNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAV 588

Query: 622 R 622
           R
Sbjct: 589 R 589


>gi|325917697|ref|ZP_08179888.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Xanthomonas
           vesicatoria ATCC 35937]
 gi|325536091|gb|EGD07896.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Xanthomonas
           vesicatoria ATCC 35937]
          Length = 634

 Score =  627 bits (1618), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 288/623 (46%), Positives = 417/623 (66%), Gaps = 20/623 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I +T PDGS + F    +   VA+SI   LAK  +A  ++G++ D SD +  + S+ IIT
Sbjct: 2   INITLPDGSRREFESPVSVMQVAQSIGAGLAKATIAGQVDGQLVDASDVIDHDASLRIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   + +IRHSCAH++  AV+ ++PEV++ IGP+I +GFYYD   E+PF+ +++A IE
Sbjct: 62  AKDAEGVEIIRHSCAHLVGHAVKQLYPEVKMVIGPVIAEGFYYDIYSERPFTPEDMAAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVT---LYRQGEWF 180
           ++MQE+IA+D   +K+     +  E+F  + E YK+ ++E +   E++T   LY   E+ 
Sbjct: 122 QRMQELIAQDYDVIKKVTPRAEVIEVFAQRGEEYKLRLIEDM--SEDITAMGLYYHQEYV 179

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           D+CRGPHV +T +  K FKL +++GAYWRGD+    L RIYGTAW  +++L  Y+  +EE
Sbjct: 180 DMCRGPHVPNT-RFLKAFKLTRISGAYWRGDAKNEQLQRIYGTAWADKKQLDAYILRMEE 238

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQV 299
           ++KRDHR++ +  DLFH+ E+  G++FWH KGW ++Q +  YMR+  +D  Y E+  PQ+
Sbjct: 239 ADKRDHRRIGKAQDLFHLQEEAPGLVFWHPKGWSLWQVVEQYMRKVYRDSGYGEVRCPQI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           LD  LWQ+SGHWD+Y+  MF       T  + RT+A+KPMNCPGHV VFN GL SYR+LP
Sbjct: 299 LDVSLWQKSGHWDNYQDAMFF------TESEKRTYAVKPMNCPGHVQVFNQGLHSYRDLP 352

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R  EFG+ +RNEPSG+LHG++RVRGFTQDD HVFC + Q+  E    H   +++Y  FG
Sbjct: 353 IRYGEFGACHRNEPSGALHGILRVRGFTQDDGHVFCLESQIEAEVTAFHQQALAVYTAFG 412

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F+ I +K++ RPEKR+G D  WD AE  ++  L       Q+      L GEGAFYGPK 
Sbjct: 413 FDDIEIKIALRPEKRLGDDGTWDKAEAALRTALGVCGVEWQE------LPGEGAFYGPKI 466

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           EY LKDAIGR WQ GT+QVDF +P R  A YV+ +S+K HPVM+HRA+ GS+ERFIGI+I
Sbjct: 467 EYHLKDAIGRTWQLGTMQVDFMMPGRLGAEYVDENSQKKHPVMLHRAIVGSMERFIGILI 526

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E+  G  P WL+P+Q +V  IT +  +Y   +   L +    +  D RNE I YKIREH+
Sbjct: 527 EHHAGAFPSWLAPVQVVVANITDAQADYVDSVRKTLANQGFRVNADLRNEKIGYKIREHT 586

Query: 600 IKKIPIIIICGDKEASERSIGIR 622
           ++++P +++ GD+E    ++ +R
Sbjct: 587 LQRVPYLLVVGDREKENGAVAVR 609


>gi|68250118|ref|YP_249230.1| threonyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
 gi|81335458|sp|Q4QK77|SYT_HAEI8 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|68058317|gb|AAX88570.1| threonyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
          Length = 643

 Score =  627 bits (1618), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 288/619 (46%), Positives = 419/619 (67%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS + F    +  +VA+ I   LAK  +A  +NG+  D  D + ++ ++EIIT +
Sbjct: 4   ITLPDGSQRQFDRPVSVLEVAQDIGAGLAKATIAGRVNGERRDACDVIEQDATLEIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ ++P+V++AIGP IE+GFYYD D ++  + +++  IEK+
Sbjct: 64  DEDGLEIIRHSCAHLLGHAIKQLFPDVKMAIGPTIENGFYYDVDLDRSLTQEDIDAIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K+ ++ ++AR+ FE + E YK+ IL E+I       LY   E+ D+CR
Sbjct: 124 MLELAKTNYDVVKKRVTWQEARDTFEKRGEPYKMAILDENIERTATPALYHHLEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +  + FKL KVAGAYWRGDS   ML RIYGTAW  +++L +YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCQHFKLQKVAGAYWRGDSKNKMLQRIYGTAWADKKQLAEYLTRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ + +DL+H+ E+  G++FWH  GW IF+ L +++R K+K  DY+E+  P ++D+ 
Sbjct: 243 DHRKIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW +Y   MF  +  +      R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWQNYADLMFTTQSEN------REYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+ +E      ++  IY  FGF  I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQIESEVTSCIKMVYDIYSTFGFTNI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPE R+GSD +WD      +         + + +   +  GEGAFYGPK E+ L
Sbjct: 417 AVKLSTRPENRIGSDEMWD------RAEAGLAAALAHNGLEYEIQEGEGAFYGPKIEFAL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D +GR+WQCGT+Q+DF LP R +A YV   + +  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 RDCLGREWQCGTVQLDFALPGRLDATYVAEDNSRKTPVMIHRAILGSIERFIGIITEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P QA+V  IT S  +Y Q++   L    L ++ D RNE + +KIREH+++++
Sbjct: 531 GFFPAWLAPTQAVVMNITDSQADYVQQVVKTLSDAGLRVKADLRNEKVGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++CGDKE +E  + +R
Sbjct: 591 PYMLVCGDKEIAEGKVAVR 609


>gi|262403446|ref|ZP_06080004.1| threonyl-tRNA synthetase [Vibrio sp. RC586]
 gi|262349950|gb|EEY99085.1| threonyl-tRNA synthetase [Vibrio sp. RC586]
          Length = 642

 Score =  627 bits (1618), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 299/642 (46%), Positives = 429/642 (66%), Gaps = 17/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS ++F    +  +VA+SI   LAK  +A  +NG   D  D +  + S+EIIT +
Sbjct: 4   ITLPDGSQRHFDNPVSTLEVAQSIGPGLAKATIAGRVNGARVDACDLIEHDASLEIITTK 63

Query: 66  DP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  A++ ++P  ++AIGP I+ GFYYD D EQ  S D+L +IE 
Sbjct: 64  DEVDGLEIVRHSCAHLLGHALKQLYPNAKMAIGPTIDSGFYYDIDLEQSLSQDDLEKIEA 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLC 183
           +M E+       +K+ +S ++AR+ FES+ E+YK+EIL E++   +   LY   E+ D+C
Sbjct: 124 RMVELAKTKYAVVKKKVSWQEARDTFESRGESYKIEILDENVARDDRPGLYHHEEYIDMC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV   G  + F KL+ +AGAYWRG+S+  ML RIYGTA++ ++ L  +L  LEE+ K
Sbjct: 184 RGPHVPHMGFCQNF-KLLNIAGAYWRGNSDNKMLQRIYGTAFHDKKALQAHLTRLEEAAK 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRK+ +++DLFH+ ++  G++FWH  GW +F+ L  ++R+K+ +  Y+E+  P ++D+
Sbjct: 243 RDHRKIGKQLDLFHMQQEAPGMVFWHHNGWSVFRDLEIFIRQKLNEYGYQEVKGPLMMDR 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y   MF       T  + R +A+KPMNCPGH+ +FN GLKSYR+LP+R+
Sbjct: 303 VLWERSGHWDKYADAMFT------TSSENREYAIKPMNCPGHIQIFNQGLKSYRDLPLRM 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSGSLHG+MRVRGFTQDDAH+FCT++Q+  E      ++   Y  FGF+ 
Sbjct: 357 AEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTEDQIQQEVTSCIKMVYDTYTTFGFQN 416

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+VKLSTRPEKRVGSD +WD +E   + ++D++K      I   +  GEGAFYGPK E+ 
Sbjct: 417 IVVKLSTRPEKRVGSDEIWDKSE---QALIDSLKAME---IPFEIQEGEGAFYGPKIEFT 470

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D + R WQCGT+Q+DFNLP+R  A YV   +E+  PVMIHRA+ GS+ERFIGI+IE +
Sbjct: 471 LYDCLDRAWQCGTVQLDFNLPTRLGATYVGESNERLIPVMIHRAILGSLERFIGILIEEY 530

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P QA+V  IT    +YA E+A  L+   +  + D RNE I +KIREH++K+
Sbjct: 531 AGFFPTWLAPEQAVVVNITDKQADYAHEVAQKLQKCGIRAKADLRNEKIGFKIREHTLKR 590

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P +++CGD+E     I +R        K  L D I  +  E
Sbjct: 591 VPYMLVCGDQEMEAGEIAVRTRKGKDLGKFKLDDFIKHIQAE 632


>gi|123442189|ref|YP_001006170.1| threonyl-tRNA synthetase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|166225517|sp|A1JMJ9|SYT_YERE8 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|122089150|emb|CAL11992.1| threonyl-tRNA synthetase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 642

 Score =  627 bits (1618), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 287/619 (46%), Positives = 424/619 (68%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + +    +  DVA  I   LAK  +A  +NG++ D SD +  +  + IIT +
Sbjct: 4   ITLPDGSQRQYDHAVSVLDVALDIGPGLAKACIAGRVNGELVDASDLIESDAQLAIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L ++RHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D  +  + ++L  +EK+
Sbjct: 64  DAEGLEILRHSCAHLLGHAIKQLWPDTKMAIGPVIDNGFYYDVDINRTLTQEDLDLLEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+  +D   +K+ +S ++AR+ F ++ E YKV IL E+I   ++  LY   E+ D+CR
Sbjct: 124 MHELADKDYDVIKKKVSWQEARDTFAARGEDYKVAILDENISRDDHPGLYHHEEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKL K +GAYWRGDS   ML RIYGTAW+ +++L  YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLQKTSGAYWRGDSKNKMLQRIYGTAWSDKKQLNAYLQRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF+ L +++R K+K+  Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELETFVRMKLKEYQYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW++Y  +MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWENYAEHMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  FGFEKI
Sbjct: 357 EFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQVRDEVNSCIKMVYDMYSTFGFEKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+GSD LW  AE+ +   L      +++ I      GEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEKRIGSDDLWTRAEDDLAAAL------TENGIPFDYQPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF+LP R +A Y+  ++++  PVMIHRA+ GS+ERFIGI+ E + 
Sbjct: 471 HDCLDRAWQCGTVQLDFSLPGRLSASYIGENNDRQVPVMIHRAILGSMERFIGILTEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+Q +V  IT S  +Y Q++   L+   +  + D RNE I +KIREH+++++
Sbjct: 531 GFFPTWLAPVQVVVMNITDSQSDYVQQVTKKLQDAGIRAKADLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++CGDKE     I +R
Sbjct: 591 PYMLVCGDKEVESGKIAVR 609


>gi|332678497|gb|AEE87626.1| Threonyl-tRNA synthetase [Francisella cf. novicida Fx1]
          Length = 634

 Score =  627 bits (1617), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 302/642 (47%), Positives = 425/642 (66%), Gaps = 16/642 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           I + FPDGSI+ F       DVA+SIS SLAK  VA  I+ ++ D  D +     + +IT
Sbjct: 2   INIRFPDGSIREFEAGVNSLDVAKSISPSLAKATVAAYIDDQLKDAKDAINSNCELRLIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +DP  L  +RHSCAH++A AV+ ++P  +V IGP++++GFYYDF  ++     +L  IE
Sbjct: 62  VKDPEGLETLRHSCAHLLAHAVKELYPNTEVTIGPVVDNGFYYDFSFKESIGEADLPTIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           KKM+E+  + +P   + +   +A E F+++ E YKVEI++SI A E V +Y Q  + DLC
Sbjct: 122 KKMKELAKKSAPVSYRVVPKAEAIEFFKAQGENYKVEIIDSI-ADEQVKIYTQDNFSDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ +T  V K FKL K+AGAYWRG+S+  ML+RIYGT W T+++L QYL  LEE+EK
Sbjct: 181 RGPHIPNTS-VLKAFKLTKLAGAYWRGNSDNEMLTRIYGTCWATKEDLEQYLNMLEEAEK 239

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQ 302
           RDHRK+ + +DLFH  ED  G+ FWH  G +I++ +  YMR    K    EI TP + D 
Sbjct: 240 RDHRKIGKVLDLFHFQEDSPGIAFWHDNGVRIWRQVEDYMRASNNKYGCSEIRTPLIADF 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LWQ+SGH   Y  NMFA K  +      R FA++PMNCP  V V+N  L SYR+LP+R+
Sbjct: 300 SLWQKSGHASKYAENMFATKSEN------RDFAIRPMNCPTCVQVYNTKLHSYRDLPIRM 353

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFG V+RNEPSGSLHGL+RVR FTQDD H+FCT EQ+  E + +      +YKDFGF  
Sbjct: 354 AEFGIVHRNEPSGSLHGLLRVRSFTQDDGHIFCTPEQVEEEVILMVQQCFEVYKDFGFND 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             VK++ RPE R+G D  WD +E ++K  LD       + ++  +L GEGAFYGPK E+ 
Sbjct: 414 FAVKIALRPENRIGDDETWDKSEQMLKNALDA------NNVSYELLPGEGAFYGPKIEFH 467

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LKDAIGR WQCGTIQ+DF++P R  A Y++ + EK  PVM+HRA+ GS+ERFIG++IE++
Sbjct: 468 LKDAIGRSWQCGTIQLDFSMPQRLGATYIDKNGEKQVPVMLHRAIVGSLERFIGMLIEHY 527

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            GNLPLWL+P+Q  V  I+++  +Y +E+  +L+ + +  + D RNE I +KIREH++ +
Sbjct: 528 AGNLPLWLAPVQVAVMGISNNQDDYCKEVFTMLEKNGIRAKLDLRNEKIGFKIREHTLLR 587

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P ++I G  E  ++ I IR+       ++S+ D    L K+
Sbjct: 588 VPYLVILGKNEQEQKIITIRKHSGEDLGQMSVDDFCAFLDKQ 629


>gi|309973051|gb|ADO96252.1| Threonyl-tRNA synthetase [Haemophilus influenzae R2846]
          Length = 643

 Score =  627 bits (1617), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 290/621 (46%), Positives = 422/621 (67%), Gaps = 20/621 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGK---VCDLSDPVREGSIEIIT 63
           +T PDGS + F    +  +VA+ I   LAK  +A  +NG+    CD+ +  ++ ++EIIT
Sbjct: 4   ITLPDGSQRQFDRPVSVLEVAQDIGAGLAKATIAGRVNGERRNACDVIE--QDATLEIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   L +IRHSCAH++  A++ ++P+V++AIGP IE+GFYYD D ++  + +++  IE
Sbjct: 62  AKDEDGLEIIRHSCAHLLGHAIKQLFPDVKMAIGPTIENGFYYDVDLDRSLTQEDIDAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDL 182
           K+M E+   +   +K+ ++ ++AR+ FE + E YK+ IL E+I       LY   E+ D+
Sbjct: 122 KRMLELAKTNYDVVKKRVTWQEARDTFEKRGEPYKMAILDENIERTATPALYHHLEYIDM 181

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +  +  + FKL KVAGAYWRGDS   ML RIYGTAW  +++L +YL  LEE+ 
Sbjct: 182 CRGPHVPNM-RFCQHFKLQKVAGAYWRGDSKNKMLQRIYGTAWADKKQLAEYLTRLEEAA 240

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRK+ + +DL+H+ E+  G++FWH  GW IF+ L +++R K+K  DY+E+  P ++D
Sbjct: 241 KRDHRKIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGPFMMD 300

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+++GHW +Y   MF  +  +      R +A+KPMNCPGHV +FN GLKSYR+LP+R
Sbjct: 301 RVLWEKTGHWQNYADLMFTTQSEN------REYAIKPMNCPGHVQIFNQGLKSYRDLPIR 354

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AEFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+ +E      ++  IY  FGF 
Sbjct: 355 MAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQIESEVTSCIKMVYDIYSTFGFT 414

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            I VKLSTRPE R+GSD +WD      +         + + +   +  GEGAFYGPK E+
Sbjct: 415 NIAVKLSTRPENRIGSDEMWD------RAEAGLAAALAHNGLEYEIQEGEGAFYGPKIEF 468

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L+D +GR+WQCGT+Q+DF LP R +A YV   + +  PVMIHRA+ GSIERFIGI+ E 
Sbjct: 469 ALRDCLGREWQCGTVQLDFALPGRLDATYVAEDNSRKTPVMIHRAILGSIERFIGIITEE 528

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  P WL+P QA+V  IT S  +Y Q++A  L    L ++TD RNE + +KIREH+++
Sbjct: 529 YAGFFPAWLAPTQAVVMNITDSQADYVQKVAKQLSDVGLRVKTDLRNEKVGFKIREHTLR 588

Query: 602 KIPIIIICGDKEASERSIGIR 622
           ++P +++CGDKE +E  + +R
Sbjct: 589 RVPYMLVCGDKEIAEGKVAVR 609


>gi|58697298|ref|ZP_00372664.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           simulans]
 gi|58536340|gb|EAL59818.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           simulans]
          Length = 580

 Score =  627 bits (1617), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 297/594 (50%), Positives = 415/594 (69%), Gaps = 18/594 (3%)

Query: 5   IKLTF-PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           I++ F  +  +K +    TG D+   +   + K+A+A  +NG++ DLS  +  +  IE+I
Sbjct: 2   IRIIFSAEQKVKEYSGKVTGFDI---LQPDVLKEAIAFKVNGELHDLSREIEADAEIEVI 58

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
              D   L +IRH  AHIMA+AV+ ++P  Q+ IGP I+DGFYYDF   + F++D+L  I
Sbjct: 59  QLSDEAGLDIIRHDAAHIMAQAVKELFPNTQITIGPTIQDGFYYDFATGRTFTTDDLTAI 118

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EKKM+EI+  +  F+++  + ++A + F    E YKV+I+ SIP  EN+T+YRQG++ DL
Sbjct: 119 EKKMKEIVKSNHRFVREVWTRKQAIDFFSDIGEKYKVDIISSIPEGENLTVYRQGDFIDL 178

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH  STG+VK F KLMKVAGAYWRGD+  PML RIYGTAW  + EL  YL  L+E+E
Sbjct: 179 CRGPHSPSTGRVKAF-KLMKVAGAYWRGDAKGPMLQRIYGTAWRNKDELNAYLECLKEAE 237

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLD 301
           KRDHRK+A++MDLFHI E+  G +FWH +G+ ++  L SY+R+K I + Y E+ TP ++ 
Sbjct: 238 KRDHRKIAKDMDLFHIQEEAVGQVFWHEQGYILYNVLESYIRKKLINNGYFEVKTPILVS 297

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW++SGHWD +R NMF V  ++      +  A+KPMNCP HV +FN   +SYR+LP+R
Sbjct: 298 KELWEKSGHWDKFRENMFIVDESES-----KKLAIKPMNCPCHVQIFNSHTRSYRDLPIR 352

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AEFG+ +RNE SGSLHGLMRVRGFTQDDAH+FC +EQ+ +E +K  +L+  +Y + GF 
Sbjct: 353 MAEFGTCHRNESSGSLHGLMRVRGFTQDDAHIFCMEEQVNSETIKFCDLLKEVYSELGFN 412

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
           +I VK S RP+ R G D +WD AE   K +L+ +K +    ++  +  GEGAFYGPK E+
Sbjct: 413 EISVKFSDRPDVRAGDDEVWDRAE---KALLEAVKEAG---LSYELSPGEGAFYGPKLEF 466

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
           +LKDAIGR WQCGT+QVDF LP R  AFY+ +   K HPVM+HRA+ G+ ERFIGI+IEN
Sbjct: 467 VLKDAIGRSWQCGTLQVDFILPERLGAFYIGADGHKHHPVMLHRAILGTFERFIGILIEN 526

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
           + G  P+WL+P Q  + TIT+ A  YA +I+N+LK   + ++TD  NE I+YKI
Sbjct: 527 YAGKFPVWLAPTQLAILTITNEADGYATKISNVLKEQGVRVKTDLTNEKISYKI 580


>gi|308049557|ref|YP_003913123.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Ferrimonas
           balearica DSM 9799]
 gi|307631747|gb|ADN76049.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Ferrimonas
           balearica DSM 9799]
          Length = 644

 Score =  627 bits (1617), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 297/633 (46%), Positives = 416/633 (65%), Gaps = 18/633 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  D+A  I   LAK  +A  +NGK+ D  D +  +  + IIT  
Sbjct: 4   ITLPDGSQRQFDKPVSVMDIANDIGPGLAKACLAGRVNGKLVDACDLIESDADVAIITTR 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L  IRHSCAH++  A++ ++PE ++AIGP+I++GFYYD D E   + +++  +EK+
Sbjct: 64  DEEGLEFIRHSCAHLLGHAIKQLFPETKMAIGPVIDNGFYYDIDLEHKLTQEDIDALEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K+ +S ++AR+ FE++ E YK+EIL E+I   +   LY   E+ D+CR
Sbjct: 124 MLELAKTNYDVIKKVVSWQEARDTFEARGETYKMEILDENISRDDRPGLYHHEEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +       FKLM VAGAYWRG+S+  ML RIYGTAW  +++L  YL  LEE+ KR
Sbjct: 184 GPHVPNMRHCH-HFKLMNVAGAYWRGNSDNKMLQRIYGTAWADKKQLKAYLQRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQH 303
           DHRK+ + +DLFH  E+  G++FWH  GW I+Q L  +MR+++ K  YEE+ TP V+D+ 
Sbjct: 243 DHRKIGKALDLFHWQEEAPGMVFWHNDGWTIYQELEGFMRKQLHKYGYEEVRTPLVMDKV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           +W++SGHWD Y   +FA      T  + RT+A+KPMNCPGH+ +F  GLKSYR+LP R+A
Sbjct: 303 MWERSGHWDKYSEMIFA------TESEKRTYAVKPMNCPGHLQIFKQGLKSYRDLPYRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFG V+RNEPSGSLHGLMRVR FTQDDAH+FCT+EQ+ +E      ++   YK FGFE+I
Sbjct: 357 EFGLVHRNEPSGSLHGLMRVRSFTQDDAHIFCTEEQILDEVTSCIKMVYDTYKTFGFEEI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPE+R+GSD LWD AE  +   LD       + +   +  GEGAFYGPK E+ L
Sbjct: 417 EVKLSTRPEQRIGSDDLWDKAEKSLAEALDA------NGLKYELQPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPS--RFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            D + R WQCGTIQ+DF++P   R +  YV   + +  PVMIHRA+ GS+ERFIGI+IE 
Sbjct: 471 HDCLDRAWQCGTIQLDFSMPQPERLDVSYVGEDNSRKVPVMIHRAILGSLERFIGILIEE 530

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G LP WL+P Q  V  IT +  +Y +++  +L    +  + D RNE I +KIREH++K
Sbjct: 531 YAGKLPTWLAPTQVQVMNITDNQADYVRQVVEMLNDQGIRAKADLRNEKIGFKIREHTLK 590

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           ++P +++CGD+E     I IR        K+ L
Sbjct: 591 RVPYLLVCGDQEMENGEIAIRTRNGVDLGKMKL 623


>gi|145631389|ref|ZP_01787160.1| threonyl-tRNA synthetase [Haemophilus influenzae R3021]
 gi|144983048|gb|EDJ90552.1| threonyl-tRNA synthetase [Haemophilus influenzae R3021]
          Length = 643

 Score =  627 bits (1617), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 289/619 (46%), Positives = 419/619 (67%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS + F    +  +VA+ I   LAK  +A  +NG+  D  D + ++ ++EIIT +
Sbjct: 4   ITLPDGSQRQFDRPVSVLEVAQDIGAGLAKATIAGRVNGERHDACDIIEQDATLEIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ ++P+V++AIGP IE+GFYYD D ++  + ++L  IEK+
Sbjct: 64  DEDGLEIIRHSCAHLLGHAIKQLFPDVKMAIGPTIENGFYYDVDLDRSLTQEDLDAIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K+ ++ ++AR+ FE + E YK+ IL E+I       LY   E+ D+CR
Sbjct: 124 MLELAKTNYDVVKKRVTWQEARDTFEKRGEPYKMAILDENIERTATPALYHHLEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +  + FKL KVAGAYWRGDS   ML RIYGTAW  +++L +YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCQHFKLQKVAGAYWRGDSKNKMLQRIYGTAWADKKQLAEYLTRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ + +DL+H+ E+  G++FWH  GW IF+ L +++R K+K  DY+E+  P ++D+ 
Sbjct: 243 DHRKIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW +Y   MF  +  +      R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWQNYADLMFTTQSEN------REYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+ +E      ++  IY  FGF  I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQIESEVTSCIKMVYDIYSTFGFTNI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPE R+GSD +WD      +         + + +   +  GEGAFYGPK E+ L
Sbjct: 417 AVKLSTRPENRIGSDEMWD------RAEAGLAAALAHNGLEYEIQEGEGAFYGPKIEFAL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D +GR+WQCGT+Q+DF LP R +A YV   + +  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 RDCLGREWQCGTVQLDFALPGRLDATYVAEDNSRKTPVMIHRAILGSIERFIGIITEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P QA+V  IT S  +Y Q++   L    L ++ D RNE + +KIREH+++++
Sbjct: 531 GFFPAWLAPTQAVVINITDSQSDYVQQVVKTLSDAGLRVKADLRNEKVGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++CGDKE +E  + +R
Sbjct: 591 PYMLVCGDKEIAEGKVAVR 609


>gi|303253033|ref|ZP_07339186.1| threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|307247204|ref|ZP_07529254.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. S1536]
 gi|302648123|gb|EFL78326.1| threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|306856262|gb|EFM88415.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. S1536]
          Length = 643

 Score =  627 bits (1617), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 290/619 (46%), Positives = 420/619 (67%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPE 65
           +T PDGS + F    +  +VA+SI   LAK  +A  +NG+  D  D + E  S+EIIT +
Sbjct: 4   ITLPDGSQRQFDNPVSVMEVAQSIGAGLAKATIAGRVNGERRDACDIISEDSSLEIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ ++P+V++AIGP I++GFYYD D ++  + ++L  IEK+
Sbjct: 64  DEDGLEIIRHSCAHLLGHAIKQLFPDVKMAIGPTIDNGFYYDVDLDRSLTQEDLDAIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K+ +S ++AR+ FE + E YK+ IL E+I       LY   E+ D+CR
Sbjct: 124 MLELAKTNYDVVKKSVSWQEARDTFEKRGEPYKMAILDENIERTATPALYHHEEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKL KVAGAYWRGDS   ML RIYGTAW  +++L +YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLQKVAGAYWRGDSKNKMLQRIYGTAWADKKQLAEYLTRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHR++ + +DL+H+ E+  G++FWH  GW IF+ L +++R K+K+ DY+E+  P ++D+ 
Sbjct: 243 DHRRIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW +Y   MF  +  +      R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWERTGHWQNYADLMFTTQSEN------REYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+ +E      ++  IY  FGF  I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQIESEVTSCIRMVYDIYSTFGFSNI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPE R+G DA+WD  E+ +   L      + + ++  +  GEGAFYGPK E+ L
Sbjct: 417 QVKLSTRPENRIGDDAMWDRTEDGLAKAL------TANGLSYEIQEGEGAFYGPKIEFAL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D + R+WQCGTIQ+DF LP R +A YV   + +  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 RDCLDREWQCGTIQLDFALPGRLDASYVAEDNGRRTPVMIHRAILGSIERFIGIITEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P QA+V  IT S  +Y Q++   L    +  ++D RNE + +K+REH+++++
Sbjct: 531 GFFPTWLAPTQAVVMNITDSQADYVQKVTKALSDAGIRAKSDLRNEKVGFKVREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++CGDKE     + +R
Sbjct: 591 PYMLVCGDKEIEAGKVSVR 609


>gi|153835364|ref|ZP_01988031.1| threonyl-tRNA synthetase [Vibrio harveyi HY01]
 gi|148868112|gb|EDL67276.1| threonyl-tRNA synthetase [Vibrio harveyi HY01]
          Length = 642

 Score =  627 bits (1617), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 299/642 (46%), Positives = 428/642 (66%), Gaps = 17/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPE 65
           +T PDGS + F    +  +VA+SI   LAK  +A  +NG   D  D + E  S+EIIT +
Sbjct: 4   ITLPDGSQRQFDNPVSTMEVAQSIGPGLAKATIAGRVNGNRVDACDLIEEDASLEIITVK 63

Query: 66  DP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  A++ ++P+ ++AIGP I++GFYYD D ++  + D+L +IEK
Sbjct: 64  DEVDGLEIVRHSCAHLLGHALKQLYPQAKMAIGPTIDNGFYYDIDLDESLTQDDLEKIEK 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLC 183
           +M+E+       +K+ +S ++AR+ FES+ E YKVEIL E++   +   LY   E+ D+C
Sbjct: 124 RMKELAKTKYEVVKKKVSWQEARDTFESRGEPYKVEILDENVSRDDRPGLYHHEEYIDMC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV + G   + F L+ VAGAYWRG+S+  ML RIYGTA++ ++ L  +L  LEE+ K
Sbjct: 184 RGPHVPNMG-FCQHFTLLNVAGAYWRGNSDNKMLQRIYGTAFHDKKALKAHLTRLEEAAK 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ ++  G++FWH  GW IF+ L  ++R K+ +  Y+E+  P ++D+
Sbjct: 243 RDHRKLGKQLDLFHMQQEAPGMVFWHHNGWSIFRDLEVFVRSKLDEYGYQEVKGPLIMDR 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y   MF       T  + R +ALKPMNCPGHV +FN GLKSYR+LP+R+
Sbjct: 303 VLWERSGHWDKYADAMFT------TSSENREYALKPMNCPGHVQIFNQGLKSYRDLPLRM 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHG+MRVRGFTQDDAH+FCT+ Q+  E      ++   Y+ FGF+ 
Sbjct: 357 AEFGSCHRNEPSGALHGIMRVRGFTQDDAHIFCTESQIQEEVTNCIKMVYDTYQTFGFDN 416

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+VKLSTRPEKRVGSD +WD +E  +K  L++++      I   +  GEGAFYGPK E+ 
Sbjct: 417 IVVKLSTRPEKRVGSDEIWDQSEEALKQSLESME------IPYEIQEGEGAFYGPKIEFT 470

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D + R WQCGT+Q+DFNLP R  A YV  ++E+  PVMIHRA+ GS+ERFIGI+IE +
Sbjct: 471 LYDCLDRAWQCGTVQLDFNLPGRLGATYVGENNERLVPVMIHRAILGSLERFIGILIEEY 530

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P QAI+  IT    +Y QE+   L+   +  + D RNE I +KIREH++K+
Sbjct: 531 AGFFPTWLAPEQAILMNITDKQSDYVQEVVQKLQKSGIRAKADLRNEKIGFKIREHTLKR 590

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P +++ GD+E     I +R        K  + D I  +  E
Sbjct: 591 VPYMLVVGDQEMEAGEIAVRTRKGKDLGKFKVDDFIAYIQDE 632


>gi|309788453|ref|ZP_07683057.1| threonyl-tRNA synthetase [Shigella dysenteriae 1617]
 gi|308923835|gb|EFP69338.1| threonyl-tRNA synthetase [Shigella dysenteriae 1617]
          Length = 622

 Score =  627 bits (1616), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 290/601 (48%), Positives = 413/601 (68%), Gaps = 16/601 (2%)

Query: 25  DVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSCAHIMAE 83
           DVA  I   LAK  +A  +NG++ D  D +   + + IIT +D   L +IRHSCAH++  
Sbjct: 2   DVALDIGPGLAKACIAGRVNGELVDACDLIENDTQLSIITAKDEEGLEIIRHSCAHLLGH 61

Query: 84  AVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSH 143
           A++ +WP  ++AIGP+I++GFYYD D ++  + +++  +EK+M E+  ++   +K+ +S 
Sbjct: 62  AIKQLWPHTKMAIGPVIDNGFYYDVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVSW 121

Query: 144 EKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMK 202
            +ARE F ++ E+YKV IL E+I   +   LY   E+ D+CRGPHV +  +    FKLMK
Sbjct: 122 HEARETFANRGESYKVSILDENIAHDDKPGLYFHEEYVDMCRGPHVPNM-RFCHHFKLMK 180

Query: 203 VAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDG 262
            AGAYWRGDSN  ML RIYGTAW  ++ L  YL  LEE+ KRDHRK+ +++DL+H+ E+ 
Sbjct: 181 TAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEA 240

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
            G++FWH  GW IF+ L  ++R K+K+  Y+E+  P ++D+ LW+++GHWD+Y+  MF  
Sbjct: 241 PGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFT- 299

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
                T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+AEFGS +RNEPSGSLHGLM
Sbjct: 300 -----TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLM 354

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALW 441
           RVRGFTQDDAH+FCT+EQ+ +E      L+  +Y  FGFEKI+VKLSTRPEKR+GSD +W
Sbjct: 355 RVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEKIVVKLSTRPEKRIGSDEMW 414

Query: 442 DDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFN 501
           D AE  +   L+      ++ I     LGEGAFYGPK E+ L D + R WQCGT+Q+DF+
Sbjct: 415 DRAEADLAVALE------ENNIPFEYQLGEGAFYGPKIEFTLYDCLDRAWQCGTVQLDFS 468

Query: 502 LPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT 561
           LPSR +A YV   +E+  PVMIHRA+ GS+ERFIGI+ E F G  P WL+P+Q ++  IT
Sbjct: 469 LPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVIMNIT 528

Query: 562 SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
            S  +Y  E+   L +  + ++ D RNE I +KIREH+++++P +++CGDKE     + +
Sbjct: 529 DSQSDYVNELTQKLSNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAV 588

Query: 622 R 622
           R
Sbjct: 589 R 589


>gi|58582810|ref|YP_201826.1| threonyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|58427404|gb|AAW76441.1| threonyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC10331]
          Length = 671

 Score =  627 bits (1616), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 286/623 (45%), Positives = 418/623 (67%), Gaps = 20/623 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I +T PDGS + F    +   VA+SI   LAK  +A  ++G++ D SD +  + S+ IIT
Sbjct: 39  INITLPDGSRREFESPVSVMQVAQSIGAGLAKATIAGRVDGQLVDASDVIDHDASLRIIT 98

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   + +IRHSCAH++  AV+ ++PEV++ IGP+I +GFYYD   E+PF+ +++A IE
Sbjct: 99  AKDAEGVEIIRHSCAHLVGHAVKQLYPEVKMVIGPVIAEGFYYDIYSERPFTPEDMAAIE 158

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVT---LYRQGEWF 180
           ++MQ +IA+D   +K+     +  E+F  + E YK+ +++ +   +++T   LY   E+ 
Sbjct: 159 QRMQALIAQDYDVIKKVTPRAEVIEVFAQRGEEYKLRLIDDM--SDDITAMGLYYHQEYV 216

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           D+CRGPHV +T +  K FKL +++GAYWRGD+    L RIYGTAW  +++L  Y+  +EE
Sbjct: 217 DMCRGPHVPNT-RFLKAFKLTRISGAYWRGDAKNEQLQRIYGTAWADKKQLDAYILRMEE 275

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQV 299
           ++KRDHR++ +  DLFH+ E+  G++FWH KGW ++Q +  YMR+  +D  Y E+  PQ+
Sbjct: 276 ADKRDHRRIGKAQDLFHLQEEAPGLVFWHPKGWSLWQVVEQYMRKVYRDSGYGEVRCPQI 335

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           LD  LWQ+SGHWD+Y+  MF       T  + RT+A+KPMNCPGHV VFN GL SYR+LP
Sbjct: 336 LDVSLWQKSGHWDNYQDAMFF------TESEKRTYAVKPMNCPGHVQVFNQGLHSYRDLP 389

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R  EFG+ +RNEPSG+LHG++RVRGFTQDD HVFC + Q+ +E    H   +++Y  FG
Sbjct: 390 IRYGEFGACHRNEPSGALHGILRVRGFTQDDGHVFCLESQIESEVTAFHQQALAVYTAFG 449

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F+ I +K++ RPEKR+G DA WD AE  ++  L       Q+      L GEGAFYGPK 
Sbjct: 450 FDDIQIKIALRPEKRLGDDATWDKAEAALRSALGVCGVEWQE------LPGEGAFYGPKI 503

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           EY LKDAIGR WQ GT+QVDF +P R  A YV+ +S+K HPVM+HRA+ GS+ERFIGI+I
Sbjct: 504 EYHLKDAIGRTWQLGTMQVDFMMPGRLGAEYVDENSQKKHPVMLHRAIVGSMERFIGILI 563

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E+  G  P WL+P+Q +V  IT +  +Y   +   L +    +  D RNE I YKIREH+
Sbjct: 564 EHHAGAFPSWLAPVQVVVANITDAQADYVDAVRKTLANQGFRVSADLRNEKIGYKIREHT 623

Query: 600 IKKIPIIIICGDKEASERSIGIR 622
           ++++P +++ GD+E    ++ +R
Sbjct: 624 LQRVPYLLVVGDREKENGAVAVR 646


>gi|323493467|ref|ZP_08098589.1| threonyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
 gi|323312290|gb|EGA65432.1| threonyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
          Length = 642

 Score =  627 bits (1616), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 297/642 (46%), Positives = 429/642 (66%), Gaps = 17/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS + F    +  +VA+SI   LAK  +A  ++G   D  D + ++ S+EIIT +
Sbjct: 4   ITLPDGSQRQFDNPVSTLEVAQSIGPGLAKATIAGRVDGNRVDACDLIEQDASLEIITVK 63

Query: 66  DPR-SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  A++ ++PE ++AIGP I++GFYYD D E   + ++L +IEK
Sbjct: 64  DEDDGLEIVRHSCAHLLGHAIKQLFPEAKMAIGPTIDNGFYYDIDLEHSLTQEDLEKIEK 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLC 183
           +M+E+       +K+ +S ++AR+ FE++ E YK+EIL E++   +   LY   E+ D+C
Sbjct: 124 RMKELAKTKYQVIKKKVSWQEARDAFEARGETYKMEILDENVARDDRPGLYHHEEYIDMC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV   G   + F L+ VAGAYWRG+S+  ML RIYGTA++ ++ L  +L  LEE+ K
Sbjct: 184 RGPHVPHMG-FCQHFTLLNVAGAYWRGNSDNKMLQRIYGTAFHDKKALKAHLTRLEEAAK 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRK+ +++DLFH+ ++  G++FWH  GW IF+ L  ++R K+ +  Y+E+  P ++D+
Sbjct: 243 RDHRKIGKQLDLFHMQQEAPGMVFWHHNGWSIFRDLEVFVREKLTEYGYQEVKGPLIMDR 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y   MF       T  + R +ALKPMNCPGHV +FN GLKSYR+LP+R+
Sbjct: 303 VLWERSGHWDKYAEAMFT------TSSENRDYALKPMNCPGHVQIFNQGLKSYRDLPLRM 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHG+MRVRGFTQDDAH+FCT+ Q+ +E      ++   Y+ FGF+ 
Sbjct: 357 AEFGSCHRNEPSGALHGIMRVRGFTQDDAHIFCTESQIQDEVTSCIKMVYDTYQTFGFDN 416

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+VKLSTRPEKRVGSD +WD +E  +K  L+ +       I   +  GEGAFYGPK E+ 
Sbjct: 417 IVVKLSTRPEKRVGSDEIWDQSEEALKQSLEAMD------IPYEIQEGEGAFYGPKIEFT 470

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D + R WQCGT+Q+DFNLP R  A YV+ ++E+  PVMIHRA+ GS+ERFIGI+IE +
Sbjct: 471 LHDCLDRAWQCGTVQLDFNLPGRLGATYVDENNERQVPVMIHRAILGSLERFIGILIEEY 530

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WLSP QA++  IT    +Y QE+A  L+   +  + D RNE I +KIREH++K+
Sbjct: 531 YGFFPTWLSPEQAVIMNITDKQSDYVQEVAQKLQKCGIRAKADLRNEKIGFKIREHTLKR 590

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P +++CGD+E     I +R        K  + D I  +  E
Sbjct: 591 VPFMLVCGDQEMEAGEIAVRTRKGKDLGKFKVDDFISYIQDE 632


>gi|156974364|ref|YP_001445271.1| threonyl-tRNA synthetase [Vibrio harveyi ATCC BAA-1116]
 gi|166225516|sp|A7N009|SYT_VIBHB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|156525958|gb|ABU71044.1| hypothetical protein VIBHAR_02079 [Vibrio harveyi ATCC BAA-1116]
          Length = 642

 Score =  627 bits (1616), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 299/642 (46%), Positives = 427/642 (66%), Gaps = 17/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPE 65
           +T PDGS + F    +  +VA+SI   LAK  +A  +NG   D  D + E  S+EIIT +
Sbjct: 4   ITLPDGSQRQFDNPVSTMEVAQSIGPGLAKATIAGRVNGNRVDACDLIEEDASLEIITVK 63

Query: 66  DP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  A++ ++P+ ++AIGP I++GFYYD D ++  + D+L +IEK
Sbjct: 64  DEVDGLEIVRHSCAHLLGHALKQLYPQAKMAIGPTIDNGFYYDIDLDESLTQDDLEKIEK 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLC 183
           +M+E+       +K+ +S ++AR+ FES+ E YKVEIL E++   +   LY   E+ D+C
Sbjct: 124 RMKELAKTKYEVVKKKVSWQEARDTFESRGEPYKVEILDENVSRDDRPGLYHHEEYIDMC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV + G   + F LM VAGAYWRG+S+  ML RIYGTA++ ++ L  +L  LEE+ K
Sbjct: 184 RGPHVPNMG-FCQHFTLMNVAGAYWRGNSDNKMLQRIYGTAFHDKKALKAHLTRLEEAAK 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ ++  G++FWH  GW IF+ L  ++R K+ +  Y+E+  P ++D+
Sbjct: 243 RDHRKLGKQLDLFHMQQEAPGMVFWHHNGWSIFRDLEVFVRSKLDEYGYQEVKGPLIMDR 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y   MF       T  + R +ALKPMNCPGHV +FN GLKSYR+LP+R+
Sbjct: 303 VLWERSGHWDKYADAMFT------TSSENREYALKPMNCPGHVQIFNQGLKSYRDLPLRM 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHG+MRVRGFTQDDAH+FCT+ Q+  E      ++   Y+ FGF+ 
Sbjct: 357 AEFGSCHRNEPSGALHGIMRVRGFTQDDAHIFCTESQIQEEVTNCIKMVYDTYQTFGFDN 416

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+VKLSTRPEKRVGSD +WD +E  +K  L++++      I   +  GEGAFYGPK E+ 
Sbjct: 417 IVVKLSTRPEKRVGSDEIWDQSEEALKQSLESME------IPYEIQEGEGAFYGPKIEFT 470

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D + R WQCGT+Q+DFNLP R  A YV  ++E+  PVMIHRA+ GS+ERFIGI+IE +
Sbjct: 471 LYDCLDRAWQCGTVQLDFNLPGRLGATYVGENNERLVPVMIHRAILGSLERFIGILIEEY 530

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P Q I+  IT    +Y QE+   L+   +  + D RNE I +KIREH++K+
Sbjct: 531 AGFFPTWLAPEQVILMNITDKQSDYVQEVVQKLQKSGIRAKADLRNEKIGFKIREHTLKR 590

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P +++ GD+E     I +R        K  + D I  +  E
Sbjct: 591 VPYMLVVGDQEMEAGEIAVRTRKGKDLGKFKVDDFIAYIQDE 632


>gi|301327449|ref|ZP_07220684.1| threonyl-tRNA synthetase [Escherichia coli MS 78-1]
 gi|309793489|ref|ZP_07687916.1| threonyl-tRNA synthetase [Escherichia coli MS 145-7]
 gi|312969746|ref|ZP_07783929.1| threonyl-tRNA synthetase [Escherichia coli 1827-70]
 gi|300845961|gb|EFK73721.1| threonyl-tRNA synthetase [Escherichia coli MS 78-1]
 gi|308123076|gb|EFO60338.1| threonyl-tRNA synthetase [Escherichia coli MS 145-7]
 gi|310338031|gb|EFQ03120.1| threonyl-tRNA synthetase [Escherichia coli 1827-70]
          Length = 622

 Score =  627 bits (1616), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 290/601 (48%), Positives = 413/601 (68%), Gaps = 16/601 (2%)

Query: 25  DVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAE 83
           DVA  I   LAK  +A  +NG++ D  D +  +  + IIT +D   L +IRHSCAH++  
Sbjct: 2   DVALDIGPGLAKACIAGRVNGELVDACDLIENDAQLSIITAKDEDGLEIIRHSCAHLLGH 61

Query: 84  AVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSH 143
           A++ +WP  ++AIGP+I++GFYYD D ++  + +++  +EK+M E+  ++   +K+ +S 
Sbjct: 62  AIKQLWPHTKMAIGPVIDNGFYYDVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVSW 121

Query: 144 EKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMK 202
            +ARE F ++ E+YKV IL E+I   +   LY   E+ D+CRGPHV +  +    FKLMK
Sbjct: 122 HEARETFANRGESYKVSILDENIAHDDKPGLYFHEEYVDMCRGPHVPNM-RFCHHFKLMK 180

Query: 203 VAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDG 262
            AGAYWRGDSN  ML RIYGTAW  ++ L  YL  LEE+ KRDHRK+ +++DL+H+ E+ 
Sbjct: 181 TAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEA 240

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
            G++FWH  GW IF+ L  ++R K+K+  Y+E+  P ++D+ LW+++GHWD+Y+  MF  
Sbjct: 241 PGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFT- 299

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
                T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+AEFGS +RNEPSGSLHGLM
Sbjct: 300 -----TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLM 354

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALW 441
           RVRGFTQDDAH+FCT+EQ+ +E      L+  +Y  FGFEKI+VKLSTRPEKR+GSD +W
Sbjct: 355 RVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEKIVVKLSTRPEKRIGSDEMW 414

Query: 442 DDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFN 501
           D AE  +   L+      ++ I     LGEGAFYGPK E+ L D + R WQCGT+Q+DF+
Sbjct: 415 DRAEADLAVALE------ENNIPFEYQLGEGAFYGPKIEFTLYDCLDRAWQCGTVQLDFS 468

Query: 502 LPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT 561
           LPSR +A YV   +E+  PVMIHRA+ GS+ERFIGI+ E F G  P WL+P+Q ++  IT
Sbjct: 469 LPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVIMNIT 528

Query: 562 SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
            S  +Y  E+   L +  + ++ D RNE I +KIREH+++++P +++CGDKE     + +
Sbjct: 529 DSQSDYVNELTQKLSNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAV 588

Query: 622 R 622
           R
Sbjct: 589 R 589


>gi|121591402|ref|ZP_01678683.1| threonyl-tRNA synthetase [Vibrio cholerae 2740-80]
 gi|121546739|gb|EAX56913.1| threonyl-tRNA synthetase [Vibrio cholerae 2740-80]
          Length = 642

 Score =  626 bits (1615), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 300/642 (46%), Positives = 429/642 (66%), Gaps = 17/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS ++F    +  +VA+SI   LAK  +A  +NG   D  D +  + S+EIIT +
Sbjct: 4   ITLPDGSQRHFDNPVSTLEVAQSIGPGLAKATIAGRVNGARVDACDLIEHDASLEIITTK 63

Query: 66  DP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  A++ ++P  ++AIGP I+ GFYYD D EQ  S ++L +IE 
Sbjct: 64  DEVDGLEIVRHSCAHLLGHALKQLYPNAKMAIGPTIDSGFYYDIDLEQSLSQEDLEKIEA 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLC 183
           +M E+       +K+ +S ++AR+ FES+ E+YK+EIL E++   +   LY   E+ D+C
Sbjct: 124 RMVELAKTKYAVVKKKVSWQEARDTFESRGESYKMEILDENVARDDRPGLYHHEEYIDMC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV   G  + F KL+ +AGAYWRG+S+  ML RIYGTA++ ++ L  +L  LEE+ K
Sbjct: 184 RGPHVPHMGFCQNF-KLLNIAGAYWRGNSDNKMLQRIYGTAFHDKKALQAHLTRLEEAAK 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRK+ +++DLFH+ ++  G++FWH  GW IF+ L  ++R+K+ +  Y+E+  P ++D+
Sbjct: 243 RDHRKIGKQLDLFHMQQEAPGMVFWHHNGWSIFRDLEIFIRQKLNEYGYQEVKGPLMMDR 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y   MF       T  + R +A+KPMNCPGH+ +FN GLKSYR+LP+R+
Sbjct: 303 VLWERSGHWDKYADAMFT------TSSENREYAIKPMNCPGHIQIFNQGLKSYRDLPLRM 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSGSLHG+MRVRGFTQDDAH+FCT++Q+  E      ++   Y  FGF+ 
Sbjct: 357 AEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTEDQIQQEVTSCIKMVYDTYTTFGFQN 416

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+VKLSTRPEKRVGSD +WD +E   + ++D++K      I   V  GEGAFYGPK E+ 
Sbjct: 417 IVVKLSTRPEKRVGSDEIWDKSE---QALIDSLKAMD---IPFEVQEGEGAFYGPKIEFT 470

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D + R WQCGT+Q+DFNLP+R  A YV   +E+  PVMIHRA+ GS+ERFIGI+IE +
Sbjct: 471 LYDCLDRAWQCGTVQLDFNLPTRLGATYVGESNERLIPVMIHRAILGSLERFIGILIEEY 530

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P QA+V  IT    +YA E+A  L+   +  + D RNE I +KIREH++K+
Sbjct: 531 AGFFPTWLAPEQAVVVNITDKQADYAHEVAQKLQKCGIRAKADLRNEKIGFKIREHTLKR 590

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P +++CGD+E     I +R        K  L D I  +  E
Sbjct: 591 VPYMLVCGDQEMEAGEIAVRTRKGKDLGKFKLDDFIAHIQAE 632


>gi|318605898|emb|CBY27396.1| threonyl-tRNA synthetase [Yersinia enterocolitica subsp.
           palearctica Y11]
          Length = 642

 Score =  626 bits (1615), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 286/619 (46%), Positives = 425/619 (68%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + +    +  DVA  I   LAK  +A  +NG++ D SD +  +  + IIT +
Sbjct: 4   ITLPDGSQRQYDHAVSVLDVALDIGPGLAKACIAGRVNGELVDASDLIESDAQLAIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L ++RHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D ++  + ++L  +EK+
Sbjct: 64  DAEGLEILRHSCAHLLGHAIKQLWPDTKMAIGPVIDNGFYYDVDIDRTLTQEDLDLLEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+  +D   +K+ +S ++AR+ F ++ E YKV IL E+I   ++  LY   E+ D+CR
Sbjct: 124 MHELADKDYDVIKKKVSWQEARDTFAARGEDYKVAILDENISRDDHPGLYHHEEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKL K +GAYWRGDS   ML RIYGTAW+ +++L  YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLQKTSGAYWRGDSKNKMLQRIYGTAWSDKKQLNAYLQRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           +HRK+ +++DL+H+ E+  G++FWH  GW IF+ L +++R K+K+  Y+E+  P ++D+ 
Sbjct: 243 NHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELETFVRMKLKEYQYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW++Y  +MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWENYAEHMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  FGFEKI
Sbjct: 357 EFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQVRDEVNSCIKMVYDMYSTFGFEKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+GSD LW  AE+ +   L      +++ I      GEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEKRIGSDDLWTRAEDDLAAAL------TENGIPFDYQPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF+LP R +A Y+  ++++  PVMIHRA+ GS+ERFIGI+ E + 
Sbjct: 471 HDCLDRAWQCGTVQLDFSLPGRLSASYIGENNDRQVPVMIHRAILGSMERFIGILTEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+Q +V  IT S  +Y Q++   L+   +  + D RNE I +KIREH+++++
Sbjct: 531 GFFPTWLAPVQVVVMNITDSQSDYVQQVTKKLQDAGIRAKADLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++CGDKE     I +R
Sbjct: 591 PYMLVCGDKEVESGKIAVR 609


>gi|238765296|ref|ZP_04626223.1| Threonyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
 gi|238696469|gb|EEP89259.1| Threonyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
          Length = 642

 Score =  626 bits (1615), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 286/619 (46%), Positives = 422/619 (68%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + +    +  DVA  I   LAK  +A  +NG++ D  D +  +  + IIT +
Sbjct: 4   ITLPDGSQRQYDRAVSVLDVALDIGPGLAKACIAGRVNGELVDAGDLIESDAQLAIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L ++RHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D ++  + ++L  +EK+
Sbjct: 64  DAEGLEILRHSCAHLLGHAIKQLWPDTKMAIGPVIDNGFYYDVDIDRTLTQEDLDLLEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+  +D   +K+ +S ++AR+ F ++ E YKV IL E+I   +   LY   E+ D+CR
Sbjct: 124 MHELADKDYDVIKKKVSWQEARDTFAARGEDYKVAILDENISRDDRPGLYHHEEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKL K +GAYWRGDS   ML RIYGTAW  +++L  YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLQKTSGAYWRGDSKNKMLQRIYGTAWGDKKQLNAYLQRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF+ L +++R K+K+  Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELETFVRMKLKEYQYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW++Y  +MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWENYAEHMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  FGFEKI
Sbjct: 357 EFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQVRDEVNSCIKMVYDMYSTFGFEKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+GSD LW  AE+ +   L      +++ I      GEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEKRIGSDDLWTRAEDDLAAAL------TENGIPFDYQPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF+LP R +A Y+  ++++  PVMIHRA+ GS+ERFIGI+ E + 
Sbjct: 471 HDCLDRAWQCGTVQLDFSLPGRLSASYIGENNDRQVPVMIHRAILGSMERFIGILTEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+Q +V  IT S  +Y Q++   L+   +  + D RNE I +KIREH+++++
Sbjct: 531 GFFPTWLAPVQVVVMNITDSQSDYVQQVTKKLQDAGIRAKADLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++CGDKE     I +R
Sbjct: 591 PYMLVCGDKEVESGKIAVR 609


>gi|260777881|ref|ZP_05886774.1| threonyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
 gi|260605894|gb|EEX32179.1| threonyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
          Length = 642

 Score =  626 bits (1614), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 297/642 (46%), Positives = 429/642 (66%), Gaps = 17/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS + F    +  +VA+SI   LAK  +A  ++G   D  D + ++ S+EIIT +
Sbjct: 4   ITLPDGSQRQFDNPVSTLEVAQSIGPGLAKATIAGRVDGNRVDACDLIEQDASLEIITVK 63

Query: 66  DP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  A++ ++PE ++AIGP I++GFYYD D E   + ++L +IEK
Sbjct: 64  DEVDGLEIVRHSCAHLLGHAIKQLFPEAKMAIGPTIDNGFYYDIDLEHSLTQEDLDKIEK 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLC 183
           +M+E+       +K+ +S ++AR+ FE++ E YK+EIL E++   +   LY   E+ D+C
Sbjct: 124 RMKELAKTKYQVIKKKVSWQEARDAFEARGETYKIEILDENVSRDDRPGLYHHEEYIDMC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV   G   + F L+ VAGAYWRG+S+  ML RIYGTA++ ++ L  +L  LEE+ K
Sbjct: 184 RGPHVPHMG-FCQHFTLLNVAGAYWRGNSDNKMLQRIYGTAFHDKKALKAHLTRLEEAAK 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRK+ +++DLFH+ ++  G++FWH  GW IF+ L  ++R K+ +  Y+E+  P ++D+
Sbjct: 243 RDHRKIGKQLDLFHMQQEAPGMVFWHHNGWSIFRDLEVFIRAKLDEYGYQEVKGPLMMDR 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+
Sbjct: 303 VLWERSGHWDKYADAMFT------TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRM 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHG+MRVRGFTQDDAH+FCT+ Q+  E      ++   Y+ FGF+ 
Sbjct: 357 AEFGSCHRNEPSGALHGIMRVRGFTQDDAHIFCTESQIQEEVTSCIKMVYDTYQTFGFDN 416

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+VKLSTRPEKRVGSD +WD +E  +K  L+ +       I   +  GEGAFYGPK E+ 
Sbjct: 417 IVVKLSTRPEKRVGSDEIWDQSEEALKQSLEAMN------IEYELQEGEGAFYGPKIEFT 470

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D + R WQCGT+Q+DFNLP R  A YV+ ++E+  PVMIHRA+ GS+ERFIGI+IE +
Sbjct: 471 LHDCLDRAWQCGTVQLDFNLPGRLGATYVDENNERQVPVMIHRAILGSLERFIGILIEEY 530

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WLSP QA++  IT    +YAQE+A  L+   +  + D RNE I +KIREH++K+
Sbjct: 531 FGFFPTWLSPEQAVIMNITDKQSDYAQEVAQKLQKCGIRAKADLRNEKIGFKIREHTLKR 590

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P +++CGD+E     I +R        K  + D I  +  E
Sbjct: 591 VPYMLVCGDQEMEAGEIAVRTRKGKDLGKFKVDDFISYIQDE 632


>gi|323499329|ref|ZP_08104306.1| threonyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
 gi|323315717|gb|EGA68751.1| threonyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
          Length = 642

 Score =  626 bits (1614), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 298/642 (46%), Positives = 430/642 (66%), Gaps = 17/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS + F    +  +VA+SI   LAK  +A  ++G+  D  D + ++ S+EIIT +
Sbjct: 4   ITLPDGSQRQFDNPVSTLEVAQSIGPGLAKATIAGRVDGERVDACDLIEQDASLEIITVK 63

Query: 66  DP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  AV+ ++PE ++AIGP I++GFYYD D E   + ++L +IEK
Sbjct: 64  DEVDGLEIVRHSCAHLLGHAVKQLFPEAKMAIGPTIDNGFYYDIDLEHSLTQEDLEKIEK 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLC 183
           +M+E+       +K+ +S ++AR+ FE++ E YK+EIL E++   +   LY   E+ D+C
Sbjct: 124 RMKELAKTKYQVIKKKVSWQEARDAFEARGETYKMEILDENVSRDDRPGLYHHEEYIDMC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV   G   + F L+ VAGAYWRG+S+  ML RIYGTA++ ++ L  +L  LEE+ K
Sbjct: 184 RGPHVPHMG-FCQHFTLLNVAGAYWRGNSDNKMLQRIYGTAFHDKKALKAHLTRLEEAAK 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRK+ +++DLFH+ ++  G++FWH  GW IF+ L  ++R K+ +  Y+E+  P ++D+
Sbjct: 243 RDHRKIGKQLDLFHMQQEAPGMVFWHHNGWSIFRDLEVFIRAKLDEYGYQEVKGPLMMDR 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+
Sbjct: 303 VLWERSGHWDKYADAMFT------TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRM 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHG+MRVRGFTQDDAH+FCT+ Q+  E      ++   Y+ FGF+ 
Sbjct: 357 AEFGSCHRNEPSGALHGIMRVRGFTQDDAHIFCTESQIQEEVTSCIKMVYDTYQTFGFDN 416

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+VKLSTRPEKRVGSD +WD +E  +K  L+ +       I   +  GEGAFYGPK E+ 
Sbjct: 417 IVVKLSTRPEKRVGSDEIWDQSEEALKQSLEAMN------IEYELQEGEGAFYGPKIEFT 470

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D + R WQCGT+Q+DFNLP R  A YV+ ++E+  PVMIHRA+ GS+ERFIGI+IE +
Sbjct: 471 LHDCLDRAWQCGTVQLDFNLPGRLGASYVDENNERQVPVMIHRAILGSLERFIGILIEEY 530

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WLSP QA++  IT    +YAQE+A  L+   +  + D RNE I +KIREH++K+
Sbjct: 531 FGFFPTWLSPEQAVIMNITDKQSDYAQEVAQKLQKVGIRAKADLRNEKIGFKIREHTLKR 590

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P +++CGD+E     I +R        K  + D I  +  E
Sbjct: 591 VPYMLVCGDQEMEAGEIAVRTRKGKDLGKFKVDDFISYIQDE 632


>gi|188577599|ref|YP_001914528.1| threonyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|188522051|gb|ACD59996.1| threonyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 649

 Score =  626 bits (1614), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 286/623 (45%), Positives = 418/623 (67%), Gaps = 20/623 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I +T PDGS + F    +   VA+SI   LAK  +A  ++G++ D SD +  + S+ IIT
Sbjct: 17  INITLPDGSRREFESPVSVMQVAQSIGAGLAKATIAGRVDGQLVDASDVIDHDASLRIIT 76

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   + +IRHSCAH++  AV+ ++PEV++ IGP+I +GFYYD   E+PF+ +++A IE
Sbjct: 77  AKDAEGVEIIRHSCAHLVGHAVKQLYPEVKMVIGPVIAEGFYYDIYSERPFTPEDMAAIE 136

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVT---LYRQGEWF 180
           ++MQ +IA+D   +K+     +  E+F  + E YK+ +++ +   +++T   LY   E+ 
Sbjct: 137 QRMQALIAQDYDVIKKVTPRAEVIEVFAQRGEEYKLRLIDDM--SDDITAMGLYYHQEYV 194

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           D+CRGPHV +T +  K FKL +++GAYWRGD+    L RIYGTAW  +++L  Y+  +EE
Sbjct: 195 DMCRGPHVPNT-RFLKAFKLTRISGAYWRGDAKNEQLQRIYGTAWADKKQLDAYILRMEE 253

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQV 299
           ++KRDHR++ +  DLFH+ E+  G++FWH KGW ++Q +  YMR+  +D  Y E+  PQ+
Sbjct: 254 ADKRDHRRIGKAQDLFHLQEEAPGLVFWHPKGWSLWQVVEQYMRKVYRDSGYGEVRCPQI 313

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           LD  LWQ+SGHWD+Y+  MF       T  + RT+A+KPMNCPGHV VFN GL SYR+LP
Sbjct: 314 LDVSLWQKSGHWDNYQDAMFF------TESEKRTYAVKPMNCPGHVQVFNQGLHSYRDLP 367

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R  EFG+ +RNEPSG+LHG++RVRGFTQDD HVFC + Q+ +E    H   +++Y  FG
Sbjct: 368 IRYGEFGACHRNEPSGALHGILRVRGFTQDDGHVFCLESQIESEVTAFHQQALAVYTAFG 427

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F+ I +K++ RPEKR+G DA WD AE  ++  L       Q+      L GEGAFYGPK 
Sbjct: 428 FDDIQIKIALRPEKRLGDDATWDKAEAALRSALGVCGVEWQE------LPGEGAFYGPKI 481

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           EY LKDAIGR WQ GT+QVDF +P R  A YV+ +S+K HPVM+HRA+ GS+ERFIGI+I
Sbjct: 482 EYHLKDAIGRTWQLGTMQVDFMMPGRLGAEYVDENSQKKHPVMLHRAIVGSMERFIGILI 541

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E+  G  P WL+P+Q +V  IT +  +Y   +   L +    +  D RNE I YKIREH+
Sbjct: 542 EHHAGAFPSWLAPVQVVVANITDAQADYVDAVRKTLANQGFRVSADLRNEKIGYKIREHT 601

Query: 600 IKKIPIIIICGDKEASERSIGIR 622
           ++++P +++ GD+E    ++ +R
Sbjct: 602 LQRVPYLLVVGDREKENGAVAVR 624


>gi|238757782|ref|ZP_04618965.1| Threonyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
 gi|238704025|gb|EEP96559.1| Threonyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
          Length = 642

 Score =  626 bits (1614), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 285/619 (46%), Positives = 425/619 (68%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D SD +  +  + IIT +
Sbjct: 4   ITLPDGSQRHYDHAVSALDVALDIGPGLAKACIAGRVNGELVDASDLIESDAHLAIITTK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L ++RHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D ++  + ++L  ++++
Sbjct: 64  DAEGLEILRHSCAHLLGHAIKQLWPDTKMAIGPVIDNGFYYDVDIDRTLTQEDLDLLDQR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+  +D   +K+ +S ++AR++F ++ E YKV IL E+I   +   LY   E+ D+CR
Sbjct: 124 MHELADKDYDVIKKKVSWQEARDVFAARGEDYKVAILDENISHDDRPGLYHHEEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKL K +GAYWRGDS   ML RIYGTAW  +++L  YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLQKTSGAYWRGDSKNKMLQRIYGTAWGDKKQLNAYLQRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF+ L +++R K+K+  Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELETFVRMKLKEYQYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW++Y  +MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWENYAEHMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  FGFEKI
Sbjct: 357 EFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQVRDEVNSCIKMVYDMYSTFGFEKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+GSD LW  AE+ +   L      +++ I      GEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEKRIGSDDLWTRAEDDLAAAL------TENGIPFDYQPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF+LP R +A Y+  ++++  PVMIHRA+ GS+ERFIGI+ E + 
Sbjct: 471 HDCLDRAWQCGTVQLDFSLPGRLSASYIGENNDRQVPVMIHRAILGSMERFIGILTEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+Q +V  IT S  +Y Q++   L+   +  + D RNE I +KIREH+++++
Sbjct: 531 GFFPTWLAPVQVVVMNITDSQSDYVQQVTKKLQDAGIRAKADLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++CGDKE     I +R
Sbjct: 591 PYMLVCGDKEVESGKIAVR 609


>gi|84624684|ref|YP_452056.1| threonyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|73919845|sp|Q5GXY0|SYT_XANOR RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|123725509|sp|Q2P0Z5|SYT_XANOM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|84368624|dbj|BAE69782.1| threonyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF
           311018]
          Length = 634

 Score =  626 bits (1614), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 286/623 (45%), Positives = 418/623 (67%), Gaps = 20/623 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I +T PDGS + F    +   VA+SI   LAK  +A  ++G++ D SD +  + S+ IIT
Sbjct: 2   INITLPDGSRREFESPVSVMQVAQSIGAGLAKATIAGRVDGQLVDASDVIDHDASLRIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   + +IRHSCAH++  AV+ ++PEV++ IGP+I +GFYYD   E+PF+ +++A IE
Sbjct: 62  AKDAEGVEIIRHSCAHLVGHAVKQLYPEVKMVIGPVIAEGFYYDIYSERPFTPEDMAAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVT---LYRQGEWF 180
           ++MQ +IA+D   +K+     +  E+F  + E YK+ +++ +   +++T   LY   E+ 
Sbjct: 122 QRMQALIAQDYDVIKKVTPRAEVIEVFAQRGEEYKLRLIDDM--SDDITAMGLYYHQEYV 179

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           D+CRGPHV +T +  K FKL +++GAYWRGD+    L RIYGTAW  +++L  Y+  +EE
Sbjct: 180 DMCRGPHVPNT-RFLKAFKLTRISGAYWRGDAKNEQLQRIYGTAWADKKQLDAYILRMEE 238

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQV 299
           ++KRDHR++ +  DLFH+ E+  G++FWH KGW ++Q +  YMR+  +D  Y E+  PQ+
Sbjct: 239 ADKRDHRRIGKAQDLFHLQEEAPGLVFWHPKGWSLWQVVEQYMRKVYRDSGYGEVRCPQI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           LD  LWQ+SGHWD+Y+  MF       T  + RT+A+KPMNCPGHV VFN GL SYR+LP
Sbjct: 299 LDVSLWQKSGHWDNYQDAMFF------TESEKRTYAVKPMNCPGHVQVFNQGLHSYRDLP 352

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R  EFG+ +RNEPSG+LHG++RVRGFTQDD HVFC + Q+ +E    H   +++Y  FG
Sbjct: 353 IRYGEFGACHRNEPSGALHGILRVRGFTQDDGHVFCLESQIESEVTAFHQQALAVYTAFG 412

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F+ I +K++ RPEKR+G DA WD AE  ++  L       Q+      L GEGAFYGPK 
Sbjct: 413 FDDIQIKIALRPEKRLGDDATWDKAEAALRSALGVCGVEWQE------LPGEGAFYGPKI 466

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           EY LKDAIGR WQ GT+QVDF +P R  A YV+ +S+K HPVM+HRA+ GS+ERFIGI+I
Sbjct: 467 EYHLKDAIGRTWQLGTMQVDFMMPGRLGAEYVDENSQKKHPVMLHRAIVGSMERFIGILI 526

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E+  G  P WL+P+Q +V  IT +  +Y   +   L +    +  D RNE I YKIREH+
Sbjct: 527 EHHAGAFPSWLAPVQVVVANITDAQADYVDAVRKTLANQGFRVSADLRNEKIGYKIREHT 586

Query: 600 IKKIPIIIICGDKEASERSIGIR 622
           ++++P +++ GD+E    ++ +R
Sbjct: 587 LQRVPYLLVVGDREKENGAVAVR 609


>gi|295096109|emb|CBK85199.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Enterobacter
           cloacae subsp. cloacae NCTC 9394]
          Length = 622

 Score =  626 bits (1614), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 288/601 (47%), Positives = 413/601 (68%), Gaps = 16/601 (2%)

Query: 25  DVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAE 83
           DVA  I   LAK  +A  +NG++ D SD +  + ++ IIT +D   L +IRHSCAH++  
Sbjct: 2   DVALDIGPGLAKATIAGRVNGELVDASDLIESDATLAIITAKDEEGLEIIRHSCAHLLGH 61

Query: 84  AVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSH 143
           A++ +WP  ++AIGP+I++GFYYD D +   + +++  +EK+M E+   +   +K+ +S 
Sbjct: 62  AIKQLWPNTKMAIGPVIDNGFYYDVDLDHTLTQEDIDALEKRMHELAETNYDVIKKKVSW 121

Query: 144 EKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMK 202
            +ARE F  + E+YKV IL E+I   +   LY   E+ D+CRGPHV +  +    FKLMK
Sbjct: 122 HEARETFVKRGESYKVSILDENIAHDDKPGLYHHQEYVDMCRGPHVPNM-RFCHHFKLMK 180

Query: 203 VAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDG 262
           +AGAYWRGDSN  ML RIYGTAW  ++ L  YL  LEE+ KRDHRK+ +++DL+H+ E+ 
Sbjct: 181 IAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEA 240

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
            G++FWH  GW IF+ L +++R K+K+  Y+E+  P ++D+ LW+++GHWD+Y+  MF  
Sbjct: 241 PGMVFWHNDGWTIFRELETFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFT- 299

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
                T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+AEFGS +RNEPSG+LHGLM
Sbjct: 300 -----TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGLM 354

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALW 441
           RVRGFTQDDAH+FCT++Q+  E      ++  +Y  FGFEKI+VKLSTRPEKR+GSD  W
Sbjct: 355 RVRGFTQDDAHIFCTEDQVREEVNACIRMVYDMYSTFGFEKIVVKLSTRPEKRIGSDETW 414

Query: 442 DDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFN 501
           D AE  +   L+      ++ I     LGEGAFYGPK E+ L D + R WQCGT+Q+DF+
Sbjct: 415 DRAEADLAVALE------ENGIPFEYQLGEGAFYGPKIEFTLYDCLDRAWQCGTVQLDFS 468

Query: 502 LPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT 561
           LP R +A YV   +E+  PVMIHRA+ GS+ERFIGI+ E F G  P WL+P+Q +V  IT
Sbjct: 469 LPQRLSASYVGEDNERQVPVMIHRAILGSLERFIGILTEEFAGFFPTWLAPVQVVVMNIT 528

Query: 562 SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
            S  +Y +E+   L++  + ++ D RNE I +KIREH+++++P +++CGDKE     + +
Sbjct: 529 DSQADYVKELTQKLQNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAV 588

Query: 622 R 622
           R
Sbjct: 589 R 589


>gi|209695239|ref|YP_002263168.1| threonyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
 gi|208009191|emb|CAQ79445.1| threonyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
          Length = 642

 Score =  626 bits (1614), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 295/641 (46%), Positives = 424/641 (66%), Gaps = 16/641 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  DVA  I   LAK  +A  ++G   D  D +  +  +EIIT +
Sbjct: 4   ITLPDGSQRQFDNAVSTMDVATDIGPGLAKACIAGRVDGVRVDACDLIENDAQLEIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  AV+ ++PE ++AIGP I++GFYYD D E   + D+L +IEK+
Sbjct: 64  DEDGLEIIRHSCAHLLGHAVKQLFPEAKMAIGPTIDNGFYYDIDMEHSLTQDDLDKIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M+E+       +K+ +S ++AR+ F+++ E YK+ IL E++   +   LY   E+ D+CR
Sbjct: 124 MKELAKTKYQVIKKNVSWQEARDAFDARGETYKIAILDENVSKDDRPGLYHHEEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +    + F K++ VAGAYWRG+S+  ML RIYGTA+  ++ L  +L  LEE+ KR
Sbjct: 184 GPHVPNMSFCQNF-KILSVAGAYWRGNSDNKMLQRIYGTAFQDKKLLKAHLIRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ + +DLFH+ ++  G++FWH  GW IF+ L  ++R K+ + DY+E+  P ++++ 
Sbjct: 243 DHRKIGKHLDLFHMQQEAPGMVFWHHNGWTIFRELEVFVREKLTEYDYQEVKGPLMMERV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWERSGHWDKYAEAMFT------TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFG+ +RNEPSG+LHG+MRVRGFTQDDAH+FCT+ Q+ +E      ++   Y  FGFE I
Sbjct: 357 EFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEAQVQDEVKSCIEMVYDTYTTFGFENI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPE+RVGSD +WD AE  ++  L+++       I   +  GEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEQRVGSDEMWDKAEADLQLALESMN------IAYEIQEGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF LP R  A YV   +E+  PVMIHRA+ GS+ERFIGI+IE++ 
Sbjct: 471 HDCLDRAWQCGTVQLDFALPERLGATYVGEDNERHTPVMIHRAILGSLERFIGILIEDYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P QAIV  IT    +Y QEIA  L+ +   ++ D RNE I +KIREH++K++
Sbjct: 531 GFFPTWLAPEQAIVMGITDKQADYVQEIAKKLQKNGFRVKADLRNEKIGFKIREHTLKRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P +++CGD+E     I +R        K  + D +  L +E
Sbjct: 591 PYMLVCGDQEMEAGEIAVRTRKGKDLGKFKIDDFVAFLQQE 631


>gi|148825906|ref|YP_001290659.1| threonyl-tRNA synthetase [Haemophilus influenzae PittEE]
 gi|166223344|sp|A5UBX5|SYT_HAEIE RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|148716066|gb|ABQ98276.1| threonyl-tRNA synthetase [Haemophilus influenzae PittEE]
          Length = 643

 Score =  626 bits (1614), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 288/619 (46%), Positives = 419/619 (67%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS + F    +  +VA+ I   LAK  +A  +NG+  D  D + ++ ++EIIT +
Sbjct: 4   ITLPDGSQRQFDHPVSVLEVAQDIGAGLAKATIAGRVNGERRDACDVIEQDATLEIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ ++P+V++AIGP IE+GFYYD D ++  + +++  IEK+
Sbjct: 64  DEDGLEIIRHSCAHLLGHAIKQLFPDVKMAIGPTIENGFYYDVDLDRSLTQEDIDAIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K+ ++ ++AR+ FE + E YK+ IL E+I       LY   E+ D+CR
Sbjct: 124 MLELAKTNYDVVKKRVTWQEARDTFEKRGEPYKMAILDENIERTATPALYHHLEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +  + FKL KVAGAYWRGDS   ML RIYGTAW  +++L +YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCQHFKLQKVAGAYWRGDSKNKMLQRIYGTAWADKKQLAEYLTRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ + +DL+H+ E+  G++FWH  GW IF+ L +++R K+K  DY+E+  P ++D+ 
Sbjct: 243 DHRKIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW +Y   MF  +  +      R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWQNYADLMFTTQSEN------REYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+ +E      ++  IY  FGF  I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQIESEVTSCIKMVYDIYSTFGFTNI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPE R+GSD +WD      +         + + +   +  GEGAFYGPK E+ L
Sbjct: 417 AVKLSTRPENRIGSDEMWD------RAEAGLAAALAHNGLEYEIQEGEGAFYGPKIEFAL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D +GR+WQCGT+Q+DF LP R +A YV   + +  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 RDCLGREWQCGTVQLDFALPGRLDATYVAEDNSRKTPVMIHRAILGSIERFIGIITEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P QA+V  IT S  +Y Q++   L    L ++ D RNE + +KIREH+++++
Sbjct: 531 GFFPAWLAPTQAVVMNITDSQSDYVQQVVKTLSDAGLRVKADLRNEKVGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++CGDKE +E  + +R
Sbjct: 591 PYMLVCGDKEIAEGKVAVR 609


>gi|15601053|ref|NP_232683.1| threonyl-tRNA synthetase [Vibrio cholerae O1 biovar eltor str.
           N16961]
 gi|153817556|ref|ZP_01970223.1| threonyl-tRNA synthetase [Vibrio cholerae NCTC 8457]
 gi|227811910|ref|YP_002811920.1| threonyl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|229506559|ref|ZP_04396068.1| threonyl-tRNA synthetase [Vibrio cholerae BX 330286]
 gi|229510645|ref|ZP_04400125.1| threonyl-tRNA synthetase [Vibrio cholerae B33]
 gi|229517224|ref|ZP_04406669.1| threonyl-tRNA synthetase [Vibrio cholerae RC9]
 gi|229606038|ref|YP_002876742.1| threonyl-tRNA synthetase [Vibrio cholerae MJ-1236]
 gi|254850514|ref|ZP_05239864.1| threonyl-tRNA synthetase [Vibrio cholerae MO10]
 gi|255745914|ref|ZP_05419861.1| threonyl-tRNA synthetase [Vibrio cholera CIRS 101]
 gi|262163529|ref|ZP_06031275.1| threonyl-tRNA synthetase [Vibrio cholerae INDRE 91/1]
 gi|298500133|ref|ZP_07009939.1| threonyl-tRNA synthetase [Vibrio cholerae MAK 757]
 gi|22654144|sp|Q9KMN7|SYT_VIBCH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|254783545|sp|C3LUV8|SYT_VIBCM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|9657684|gb|AAF96196.1| threonyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|126511981|gb|EAZ74575.1| threonyl-tRNA synthetase [Vibrio cholerae NCTC 8457]
 gi|227011052|gb|ACP07263.1| threonyl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|229345260|gb|EEO10233.1| threonyl-tRNA synthetase [Vibrio cholerae RC9]
 gi|229353090|gb|EEO18030.1| threonyl-tRNA synthetase [Vibrio cholerae B33]
 gi|229356910|gb|EEO21828.1| threonyl-tRNA synthetase [Vibrio cholerae BX 330286]
 gi|229372524|gb|ACQ62946.1| threonyl-tRNA synthetase [Vibrio cholerae MJ-1236]
 gi|254846219|gb|EET24633.1| threonyl-tRNA synthetase [Vibrio cholerae MO10]
 gi|255735668|gb|EET91066.1| threonyl-tRNA synthetase [Vibrio cholera CIRS 101]
 gi|262028096|gb|EEY46755.1| threonyl-tRNA synthetase [Vibrio cholerae INDRE 91/1]
 gi|297542114|gb|EFH78165.1| threonyl-tRNA synthetase [Vibrio cholerae MAK 757]
          Length = 642

 Score =  626 bits (1614), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 299/642 (46%), Positives = 429/642 (66%), Gaps = 17/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS ++F    +  +VA+SI   LAK  +A  +NG   D  D +  + S+EIIT +
Sbjct: 4   ITLPDGSQRHFDNPVSTLEVAQSIGPGLAKATIAGRVNGARVDACDLIEHDASLEIITTK 63

Query: 66  DP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  A++ ++P  ++AIGP I+ GFYYD D EQ  S ++L +IE 
Sbjct: 64  DEVDGLEIVRHSCAHLLGHALKQLYPNAKMAIGPTIDSGFYYDIDLEQSLSQEDLEKIEA 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLC 183
           +M E+       +K+ +S ++AR+ FES+ E+YK+EIL E++   +   LY   E+ D+C
Sbjct: 124 RMVELAKTKYAVVKKKVSWQEARDTFESRGESYKMEILDENVARDDRPGLYHHEEYIDMC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV   G  + F KL+ +AGAYWRG+S+  ML RIYGTA++ ++ L  +L  LEE+ K
Sbjct: 184 RGPHVPHMGFCQNF-KLLNIAGAYWRGNSDNKMLQRIYGTAFHDKKALQAHLTRLEEAAK 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRK+ +++DLFH+ ++  G++FWH  GW IF+ L  ++R+K+ +  Y+E+  P ++D+
Sbjct: 243 RDHRKIGKQLDLFHMQQEAPGMVFWHHNGWSIFRDLEIFIRQKLNEYGYQEVKGPLMMDR 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y   MF       T  + R +A+KPMNCPGH+ +FN GLKSYR+LP+R+
Sbjct: 303 VLWERSGHWDKYADAMFT------TSSENREYAIKPMNCPGHIQIFNQGLKSYRDLPLRM 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSGSLHG+MRVRGFTQDDAH+FCT++Q+  E      ++   Y  FGF+ 
Sbjct: 357 AEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTEDQIQQEVTSCIKMVYDTYTTFGFQN 416

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+VKLSTRPEKRVGSD +WD +E   + ++D++K      I   +  GEGAFYGPK E+ 
Sbjct: 417 IVVKLSTRPEKRVGSDEIWDKSE---QALIDSLKAMD---IPFEIQEGEGAFYGPKIEFT 470

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D + R WQCGT+Q+DFNLP+R  A YV   +E+  PVMIHRA+ GS+ERFIGI+IE +
Sbjct: 471 LYDCLDRAWQCGTVQLDFNLPTRLGATYVGESNERLIPVMIHRAILGSLERFIGILIEEY 530

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P QA+V  IT    +YA E+A  L+   +  + D RNE I +KIREH++K+
Sbjct: 531 AGFFPTWLAPEQAVVVNITDKQADYAHEVAQKLQKCGIRAKADLRNEKIGFKIREHTLKR 590

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P +++CGD+E     I +R        K  L D I  +  E
Sbjct: 591 VPYMLVCGDQEMEAGEIAVRTRKGKDLGKFKLDDFIAHIQAE 632


>gi|300722778|ref|YP_003712069.1| threonine tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
 gi|297629286|emb|CBJ89885.1| threonine tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
          Length = 642

 Score =  626 bits (1614), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 288/619 (46%), Positives = 424/619 (68%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  DVA  I   LAK  +A  ING++ D  + +  + ++ IIT +
Sbjct: 4   ITLPDGSQRQFEHAVSVMDVARDIGVGLAKACIAGRINGELVDACELIETDANLAIITSK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           +   L +IRHSCAH++  A++ +WP+ ++AIGPII++GFYYD D ++  + +++  +EK+
Sbjct: 64  NEEGLEIIRHSCAHLLGHAIKQLWPDTKMAIGPIIDNGFYYDVDLDRSLTKEDIELLEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+  +D   +K+ ++ ++AR+ F ++ E YK++IL E+I   ++  LY   E+ D+CR
Sbjct: 124 MLELAKKDYDVIKKKVTWQEARDAFVARGEEYKIQILDENISHDDHPGLYHHEEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKL KVAGAYWRG+S+  ML RIYGTAW  +++L  YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLQKVAGAYWRGNSDNKMLQRIYGTAWADKKQLNAYLQRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G+ FWH  GW IF+ L +++R K+K+  Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMAFWHNDGWTIFRELETFVRTKLKEYQYQEVKGPFMMDRI 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           +W+++GHW++Y+ NMF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 MWEKTGHWENYKENMFT------TSSENREYCVKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT++Q+  E      +I  +Y  FGFEKI
Sbjct: 357 EFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEDQILQEVSSCIKMIYDVYGTFGFEKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+G++  WD+AE       D  K  +Q+ I      GEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEKRIGTEKQWDEAE------ADLAKALTQNSIEFEYQPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF+LP+R +A YV  ++E+  PVMIHRAV GS+ERFIGI+ E + 
Sbjct: 471 YDCLDRAWQCGTVQLDFSLPARLSASYVGENNERKVPVMIHRAVLGSLERFIGILTEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P Q +V  IT     Y QE+   L+   +  + D RNE I +KIREH+++++
Sbjct: 531 GFFPTWLAPQQVVVMNITDGQSNYVQELVKKLQDVGIRAKADLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++CGDKE     + +R
Sbjct: 591 PYMLVCGDKEVESGKVSVR 609


>gi|293392211|ref|ZP_06636545.1| threonyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D7S-1]
 gi|290952745|gb|EFE02864.1| threonyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D7S-1]
          Length = 643

 Score =  626 bits (1614), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 300/641 (46%), Positives = 423/641 (65%), Gaps = 16/641 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPE 65
           +T PDGS + F    T  +VA+ I   LAK  +A  +NG+  D  D + E S + IIT +
Sbjct: 4   ITLPDGSQRQFDKPVTVLEVAQDIGAGLAKATIAGRVNGERKDACDLITEDSRVAIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHS AH++  A++ ++P V++AIGP I++GFYYD D ++  + ++L  +EK+
Sbjct: 64  DEDGLEIIRHSTAHLLGHAIKQLFPNVKMAIGPTIDNGFYYDVDLDRSLTQEDLDALEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K  +S ++AR+ F  + E YK+ IL E+I       LY   E+ D+CR
Sbjct: 124 MLELAKTNYDVIKTPVSWQEARDTFGKRGEPYKMAILDENIERTATPALYHHQEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKL K+AGAYWRGDS   ML RIYGTAW  +++L  YL+ LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLQKIAGAYWRGDSKNKMLQRIYGTAWADKKQLEAYLHRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ + +DL+H+ E+  G++FWH  GW IF+ L +++R K+K  DY+E+  P ++D+ 
Sbjct: 243 DHRKIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW +Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWQNYGDLMFT------TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FC  +Q+ +E      ++  IY  FGFE I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCMPDQVESEVTSCIKMVYDIYSTFGFENI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPEKR+GSD +WD AE       D  K    + ++  +  GEGAFYGPK E+ L
Sbjct: 417 KVKLSTRPEKRIGSDEMWDKAE------ADLAKALEHNGLSYEIQEGEGAFYGPKLEFAL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D++ R+WQCGTIQ+DF LP R NA YV   +E+  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 TDSLDREWQCGTIQLDFFLPERLNASYVGEDNERKIPVMIHRAILGSIERFIGIITEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P+WL+P QA+V  IT S  EY Q++A  L    L ++TD RNE + +KIREH++ ++
Sbjct: 531 GFFPVWLAPTQAVVMNITDSQSEYVQKVAKQLSDAGLRVKTDLRNEKVGFKIREHTLHRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P +++CGDKE     + +R          ++ + + IL K+
Sbjct: 591 PYMLVCGDKEIEAGKVAVRTRKGQDLGTFTVEEFLDILKKQ 631


>gi|297579610|ref|ZP_06941537.1| threonyl-tRNA synthetase [Vibrio cholerae RC385]
 gi|297535256|gb|EFH74090.1| threonyl-tRNA synthetase [Vibrio cholerae RC385]
          Length = 642

 Score =  626 bits (1614), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 300/642 (46%), Positives = 429/642 (66%), Gaps = 17/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS ++F    +  +VA+SI   LAK  +A  +NG   D  D +  + S+EIIT +
Sbjct: 4   ITLPDGSQRHFDNPVSTLEVAQSIGPGLAKATIAGRVNGVRVDACDMIEHDASLEIITTK 63

Query: 66  DP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  A++ ++P  ++AIGP I+ GFYYD D EQ  S ++L +IE 
Sbjct: 64  DEVDGLEIVRHSCAHLLGHALKQLYPNAKMAIGPTIDSGFYYDIDLEQSLSQEDLEKIEA 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLC 183
           +M E+       +K+ +S ++AR+ FES+ E+YK+EIL E++   +   LY   E+ D+C
Sbjct: 124 RMVELAKTKYAVVKKKVSWQEARDTFESRGESYKMEILDENVARDDRPGLYHHEEYIDMC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV   G  + F KL+ +AGAYWRG+S+  ML RIYGTA++ ++ L  +L  LEE+ K
Sbjct: 184 RGPHVPHMGFCQNF-KLLNIAGAYWRGNSDNKMLQRIYGTAFHDKKALQAHLTRLEEAAK 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRK+ +++DLFH+ ++  G++FWH  GW IF+ L  ++R+K+ +  Y+E+  P ++D+
Sbjct: 243 RDHRKIGKQLDLFHMQQEAPGMVFWHHNGWSIFRDLEIFIRQKLNEYGYQEVKGPLMMDR 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y   MF       T  + R +A+KPMNCPGH+ +FN GLKSYR+LP+R+
Sbjct: 303 VLWERSGHWDKYADAMFT------TSSENREYAIKPMNCPGHIQIFNQGLKSYRDLPLRM 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSGSLHG+MRVRGFTQDDAH+FCT++Q+  E      ++   Y  FGF+ 
Sbjct: 357 AEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTEDQIQQEVTSCIKMVYDTYTTFGFQN 416

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+VKLSTRPEKRVGSD +WD +E   + ++D++K      I   +  GEGAFYGPK E+ 
Sbjct: 417 IVVKLSTRPEKRVGSDEIWDKSE---QALIDSLKAMD---IPFEIQEGEGAFYGPKIEFT 470

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D + R WQCGT+Q+DFNLP+R  A YV   +E+  PVMIHRA+ GS+ERFIGI+IE +
Sbjct: 471 LYDCLDRAWQCGTVQLDFNLPTRLGATYVGESNERLIPVMIHRAILGSLERFIGILIEEY 530

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P QAIV  IT    +YA E+A  L+   +  + D RNE I +KIREH++K+
Sbjct: 531 AGFFPTWLAPEQAIVVNITDKQADYAHEVAQKLQKCGIRAKADLRNEKIGFKIREHTLKR 590

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P +++CGD+E     I +R        K  L D I  +  E
Sbjct: 591 VPYMLVCGDQEMEAGEIAVRTRKGKDLGKFKLDDFIAHIQAE 632


>gi|262164341|ref|ZP_06032079.1| threonyl-tRNA synthetase [Vibrio mimicus VM223]
 gi|262026721|gb|EEY45388.1| threonyl-tRNA synthetase [Vibrio mimicus VM223]
          Length = 642

 Score =  626 bits (1614), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 300/642 (46%), Positives = 429/642 (66%), Gaps = 17/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS ++F    +  +VA+SI   LAK  +A  +NG   D  D +  + S+EIIT +
Sbjct: 4   ITLPDGSQRHFDNPVSTLEVAQSIGPGLAKATIAGRVNGARVDACDLIEHDASLEIITTK 63

Query: 66  DP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  A++ ++P  ++AIGP I+ GFYYD D EQ  S ++L +IE 
Sbjct: 64  DEVDGLEIVRHSCAHLLGHALKQLYPNAKMAIGPTIDSGFYYDIDLEQSLSQEDLEKIEA 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLC 183
           +M E+       +K+ +S ++AR+ FES+ E+YK+EIL E++   +   LY   E+ D+C
Sbjct: 124 RMVELAKTKYAVVKKKVSWQEARDTFESRGESYKMEILDENVARDDRPGLYHHEEYIDMC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV   G  + F KL+ VAGAYWRG+S+  ML RIYGTA++ ++ L  +L  LEE+ K
Sbjct: 184 RGPHVPHMGFCQNF-KLLNVAGAYWRGNSDNKMLQRIYGTAFHDKKALQAHLTRLEEAAK 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRK+ +++DLFH+ ++  G++FWH  GW IF+ L  ++R+K+ +  Y+E+  P ++D+
Sbjct: 243 RDHRKIGKQLDLFHMQQEAPGMVFWHHNGWSIFRDLEIFIRQKLNEYGYQEVKGPLMMDR 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y   MF       T  + R +A+KPMNCPGH+ +FN GLKSYR+LP+R+
Sbjct: 303 VLWERSGHWDKYADAMFT------TSSENREYAIKPMNCPGHIQIFNQGLKSYRDLPLRM 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSGSLHG+MRVRGFTQDDAH+FCT++Q+  E      ++   Y  FGF+ 
Sbjct: 357 AEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTEDQIQQEVTSCIKMVYDTYTTFGFQN 416

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+VKLSTRPEKRVGSD +WD +E   + ++D++K      I   +  GEGAFYGPK E+ 
Sbjct: 417 IVVKLSTRPEKRVGSDEIWDKSE---QALIDSLKAMD---IPFEIQEGEGAFYGPKIEFT 470

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D + R WQCGT+Q+DFNLP+R  A YV   +E+  PVMIHRA+ GS+ERFIGI+IE +
Sbjct: 471 LYDCLDRAWQCGTVQLDFNLPTRLGATYVGESNERLIPVMIHRAILGSLERFIGILIEEY 530

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P QA+V  IT    +YA E+A  L+   +  + D RNE I +KIREH++K+
Sbjct: 531 AGFFPTWLAPEQAVVVNITDKQADYAHEVAQKLQKCGIRAKADLRNEKIGFKIREHTLKR 590

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P +++CGD+E     I +R        K  L D I  +  E
Sbjct: 591 VPYMLVCGDQEMEAGEIAVRTRKGKDLGKFKLDDFIKHIQAE 632


>gi|16273277|ref|NP_439518.1| threonyl-tRNA synthetase [Haemophilus influenzae Rd KW20]
 gi|260580800|ref|ZP_05848626.1| threonyl-tRNA synthetase [Haemophilus influenzae RdAW]
 gi|1174548|sp|P43014|SYT_HAEIN RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|1574199|gb|AAC23014.1| threonyl-tRNA synthetase (thrS) [Haemophilus influenzae Rd KW20]
 gi|260092617|gb|EEW76554.1| threonyl-tRNA synthetase [Haemophilus influenzae RdAW]
          Length = 643

 Score =  625 bits (1613), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 289/619 (46%), Positives = 420/619 (67%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS + F    +  +VA+ I   LAK  +A  +NG+  D    + ++ ++EIIT +
Sbjct: 4   ITLPDGSQRQFDRPVSVLEVAQDIGAGLAKATIAGRVNGERRDACYVIEQDATLEIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ ++P+V++AIGP IE+GFYYD D ++  + +++  IEK+
Sbjct: 64  DEDGLEIIRHSCAHLLGHAIKQLFPDVKMAIGPTIENGFYYDVDLDRSLTQEDIDAIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K+ ++ ++AR+ FE + E YK+ IL E+I       LY   E+ D+CR
Sbjct: 124 MLELAKTNYDVVKKRVTWQEARDTFEKRGEPYKMAILDENIERTATPALYHHLEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +  + FKL KVAGAYWRGDS   ML RIYGTAW  +++L +YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCQHFKLQKVAGAYWRGDSKNKMLQRIYGTAWADKKQLAEYLTRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ + +DL+H+ E+  G++FWH  GW IF+ L +++R K+K  DY+E+  P ++D+ 
Sbjct: 243 DHRKIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW +Y   MF  +  +      R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWQNYADLMFTTQSEN------REYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+ +E      ++  IY  FGF  I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQIESEVTSCIKMVYDIYSTFGFTNI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPE R+GSD +WD      +         + + +   +  GEGAFYGPK E+ L
Sbjct: 417 AVKLSTRPENRIGSDEMWD------RAEAGLAAALAHNGLEYEIQEGEGAFYGPKIEFAL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D +GR+WQCGT+Q+DF LP R +A YV   + +  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 RDCLGREWQCGTVQLDFALPGRLDATYVAEDNSRKTPVMIHRAILGSIERFIGIITEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P QA+V  IT S  +Y Q++A  L    L ++TD RNE + +KIREH+++++
Sbjct: 531 GFFPAWLAPTQAVVMNITDSQADYVQKVAKQLSDVGLRVKTDLRNEKVGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++CGDKE +E  + +R
Sbjct: 591 PYMLVCGDKEIAEGKVAVR 609


>gi|166711588|ref|ZP_02242795.1| threonyl-tRNA synthetase [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 634

 Score =  625 bits (1613), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 286/623 (45%), Positives = 417/623 (66%), Gaps = 20/623 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I +T PDGS + F    +   VA+SI   LAK  +A  ++G++ D SD +  + S+ IIT
Sbjct: 2   INITLPDGSRREFESPVSVMQVAQSIGAGLAKATIAGQVDGQLVDASDVIDHDASLRIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   + +IRHSCAH++  AV+ ++PEV++ IGP+I +GFYYD   E+PF+ +++A IE
Sbjct: 62  AKDAEGVEIIRHSCAHLVGHAVKQLYPEVKMVIGPVIAEGFYYDIYSERPFTPEDMAAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVT---LYRQGEWF 180
           ++MQ +IA+D   +K+     +  E+F  + E YK+ +++ +   +++T   LY   E+ 
Sbjct: 122 QRMQALIAQDYDVIKKVTPRAEVIEVFAQRGEEYKLRLIDDM--SDDITAMGLYYHQEYV 179

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           D+CRGPHV +T +  K FKL +++GAYWRGD+    L RIYGTAW  +++L  Y+  +EE
Sbjct: 180 DMCRGPHVPNT-RFLKAFKLTRISGAYWRGDAKNEQLQRIYGTAWADKKQLDAYILRMEE 238

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQV 299
           ++KRDHR++ +  DLFH+ E+  G++FWH KGW ++Q +  YMR+  +D  Y E+  PQ+
Sbjct: 239 ADKRDHRRIGKAQDLFHLQEEAPGLVFWHPKGWSLWQVVEQYMRKVYRDSGYGEVRCPQI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           LD  LWQ+SGHWD+Y+  MF       T  + RT+A+KPMNCPGHV VFN GL SYR+LP
Sbjct: 299 LDVSLWQKSGHWDNYQDAMFF------TESEKRTYAVKPMNCPGHVQVFNQGLHSYRDLP 352

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R  EFG+ +RNEPSG+LHG++RVRGFTQDD HVFC + Q+ +E    H   +++Y  FG
Sbjct: 353 IRYGEFGACHRNEPSGALHGILRVRGFTQDDGHVFCLESQIESEVTAFHQQALAVYTAFG 412

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F+ I +K++ RPEKR+G DA WD AE  ++  L       Q+      L GEGAFYGPK 
Sbjct: 413 FDDIQIKIALRPEKRLGDDATWDKAEAALRSALGVCGVEWQE------LPGEGAFYGPKI 466

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           EY LKDAIGR WQ GT+QVDF +P R  A YV+ +S+K HPVM+HRA+ GS+ERFIGI+I
Sbjct: 467 EYHLKDAIGRTWQLGTMQVDFMMPGRLGAEYVDENSQKKHPVMLHRAIVGSMERFIGILI 526

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E+  G  P WL+P+Q +V  IT +  +Y   +   L +    +  D RNE I YKIREH 
Sbjct: 527 EHHAGAFPSWLAPVQVVVANITDAQADYVDAVRKTLANQGFRVSADLRNEKIGYKIREHM 586

Query: 600 IKKIPIIIICGDKEASERSIGIR 622
           ++++P +++ GD+E    ++ +R
Sbjct: 587 LQRVPYLLVVGDREKENGAVAVR 609


>gi|192360042|ref|YP_001982990.1| threonyl-tRNA synthetase [Cellvibrio japonicus Ueda107]
 gi|238692463|sp|B3PL16|SYT_CELJU RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|190686207|gb|ACE83885.1| threonyl-tRNA synthetase [Cellvibrio japonicus Ueda107]
          Length = 642

 Score =  625 bits (1613), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 292/619 (47%), Positives = 422/619 (68%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPE 65
           +T PDGS ++F    +  +VA SI   LAK  +   +NG+  D  D + E  ++ I TP+
Sbjct: 4   ITLPDGSQRSFDKPVSVYEVAASIGPGLAKATLGGRVNGQRVDAHDLISEDANLVIFTPK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ ++P+V++AIGP I++GFYYD D E   + +++A +E +
Sbjct: 64  DDDGLEIIRHSCAHLLGHAIKQLYPDVKMAIGPTIDNGFYYDVDLEHKLTDEDIAALEAR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE-SIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K+ +S ++A  +F ++ E+YK+EILE  IP  +   LY   E+ D+CR
Sbjct: 124 MLELAKTEYDVVKKKVSWQEAHAVFAARGESYKLEILERDIPQSDQPGLYHHEEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKLM+V+GAYWRGDSN  ML RIYGTA+   ++L  YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCLNFKLMRVSGAYWRGDSNNKMLQRIYGTAFADAKQLKAYLNLLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRKLA++ DLFH+ ++  G++FWH KGW ++Q +  YMR K  D  Y+E+ TP ++D+ 
Sbjct: 243 DHRKLAKKFDLFHLQDEAPGMVFWHPKGWTLWQQIEQYMRAKQNDWGYQEVRTPLIMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SGHW++YR NMF       T  + R FA+KPMNCPGHV +FNHGL+S+++LP+RLA
Sbjct: 303 LWEKSGHWENYRENMFT------TESEKRDFAVKPMNCPGHVQIFNHGLRSHKDLPLRLA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNE SG+LHG+MRVRGF QDDAH+FCT++Q+  E    + ++ S+Y DFGF  I
Sbjct: 357 EFGSCHRNEASGALHGIMRVRGFVQDDAHIFCTEDQVVAEVAAFNQMLKSVYDDFGFTDI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLS RPEK  GS   W+ AE  ++  L       ++      L GEGAFYGPK EY +
Sbjct: 417 AVKLSLRPEKYAGSLETWNKAEEGLRTALRAAGLEWEE------LPGEGAFYGPKIEYQI 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           KDA+GR WQCGTIQ+D+ LP R +A YV   + +  PVM+HRA+ GS ERF+GI+IE+++
Sbjct: 471 KDALGRSWQCGTIQLDYVLPERLDAEYVADDNVRKRPVMLHRAILGSFERFLGILIEHYE 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G+ P+WLSP+Q +V  IT S  EY + +   L+   + +  D RNE I +KIREH+I+++
Sbjct: 531 GSFPVWLSPVQVVVANITDSQAEYVKRVEKALREQGIRVIADLRNEKIGFKIREHTIQRV 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++ GDKE   +S+ +R
Sbjct: 591 PYLLVVGDKEVENQSLAVR 609


>gi|258623264|ref|ZP_05718271.1| threonyl-tRNA synthetase [Vibrio mimicus VM573]
 gi|262173542|ref|ZP_06041219.1| threonyl-tRNA synthetase [Vibrio mimicus MB-451]
 gi|258584450|gb|EEW09192.1| threonyl-tRNA synthetase [Vibrio mimicus VM573]
 gi|261890900|gb|EEY36887.1| threonyl-tRNA synthetase [Vibrio mimicus MB-451]
          Length = 642

 Score =  625 bits (1613), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 299/642 (46%), Positives = 429/642 (66%), Gaps = 17/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS ++F    +  +VA+SI   LAK  +A  +NG   D  D +  + S+EIIT +
Sbjct: 4   ITLPDGSQRHFDNPVSTLEVAQSIGPGLAKATIAGRVNGARVDACDLIEHDASLEIITTK 63

Query: 66  DP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  A++ ++P  ++AIGP I+ GFYYD D EQ  S ++L +IE 
Sbjct: 64  DEVDGLEIVRHSCAHLLGHALKQLYPNAKMAIGPTIDSGFYYDIDLEQSLSQEDLEKIEA 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLC 183
           +M E+       +K+ +S ++AR+ FES+ E+YK+EIL E++   +   LY   E+ D+C
Sbjct: 124 RMVELAKTKYAVVKKKVSWQEARDTFESRGESYKMEILDENVARDDRPGLYHHEEYIDMC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV   G  + F KL+ +AGAYWRG+S+  ML RIYGTA++ ++ L  +L  LEE+ K
Sbjct: 184 RGPHVPHMGFCQNF-KLLNIAGAYWRGNSDNKMLQRIYGTAFHDKKALQAHLTRLEEAAK 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRK+ +++DLFH+ ++  G++FWH  GW IF+ L  ++R+K+ +  Y+E+  P ++D+
Sbjct: 243 RDHRKIGKQLDLFHMQQEAPGMVFWHHNGWSIFRDLEIFIRQKLNEYGYQEVKGPLMMDR 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y   MF       T  + R +A+KPMNCPGH+ +FN GLKSYR+LP+R+
Sbjct: 303 VLWERSGHWDKYADAMFT------TSSENREYAIKPMNCPGHIQIFNQGLKSYRDLPLRM 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSGSLHG+MRVRGFTQDDAH+FCT++Q+  E      ++   Y  FGF+ 
Sbjct: 357 AEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTEDQIQQEVTSCIKMVYDTYTTFGFQN 416

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+VKLSTRPEKRVGSD +WD +E   + ++D++K      I   +  GEGAFYGPK E+ 
Sbjct: 417 IVVKLSTRPEKRVGSDEIWDKSE---QALIDSLKAME---IPFEIQEGEGAFYGPKIEFT 470

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D + R WQCGT+Q+DFNLP+R  A YV   +E+  PVMIHRA+ GS+ERFIGI+IE +
Sbjct: 471 LYDCLDRAWQCGTVQLDFNLPTRLGATYVGESNERLIPVMIHRAILGSLERFIGILIEEY 530

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P QA+V  IT    +YA E+A  L+   +  + D RNE I +KIREH++K+
Sbjct: 531 AGFFPTWLAPEQAVVVNITDKQADYAHEVAQKLQKCGIRAKADLRNEKIGFKIREHTLKR 590

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P +++CGD+E     I +R        K  L D I  +  E
Sbjct: 591 VPYMLVCGDQEMEAGEIAVRTRKGKDLGKFKLDDFIKHIQAE 632


>gi|146293114|ref|YP_001183538.1| threonyl-tRNA synthetase [Shewanella putrefaciens CN-32]
 gi|166225500|sp|A4Y706|SYT_SHEPC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|145564804|gb|ABP75739.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Shewanella
           putrefaciens CN-32]
          Length = 642

 Score =  625 bits (1612), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 289/633 (45%), Positives = 412/633 (65%), Gaps = 16/633 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  DVA  I   LAK  +A  +NG++ D  D +  +  + IIT +
Sbjct: 4   ITLPDGSKREFAHAVSTLDVAADIGPGLAKACIAGRVNGELKDACDLIETDAELSIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   + ++RHSCAH++  A++ +WPE ++AIGP+I++GFYYD D E   + D++  +EK+
Sbjct: 64  DEEGVEILRHSCAHLLGHAIKQMWPETKMAIGPVIDNGFYYDIDLEHKLTQDDIEALEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M ++   +   +K+ +S ++AR+ F ++ E YK+ IL E+I       LY   E+ D+CR
Sbjct: 124 MLQLAKTNYDVVKRVVSWQEARDTFAARGEEYKIAILDENISKDATPALYHHEEYTDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +  + FKLM +AGAYWRG+S   ML RIYGTAW  ++ L+ +L  LEE+ KR
Sbjct: 184 GPHVPNM-RFCQHFKLMSIAGAYWRGNSENKMLQRIYGTAWADKKALSTHLTRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF  L  ++RRK+    Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWSIFLELERFIRRKLNQYTYQEVKGPLMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWERSGHWDKYSEAMFT------TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFG  +RNEPSGSLHGLMRVRGFTQDDAH+FCT +Q+  E      ++   Y  FGFE I
Sbjct: 357 EFGCCHRNEPSGSLHGLMRVRGFTQDDAHIFCTDDQVQEEVSACIQMVYDTYSTFGFENI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+G DA+WD AE  +K  L        + I   +L GEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEKRIGDDAMWDRAEEALKQAL------RANNIEFTLLPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+D+ LPSR  A YV   + +  PVMIHRA+ GS+ERF+GI+IE + 
Sbjct: 471 HDCLDRAWQCGTVQLDYALPSRLGATYVAEDNSRQTPVMIHRAILGSLERFLGILIEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+Q +V  IT    +Y QEI    K   +    D RNE I +KIREH+++++
Sbjct: 531 GRFPTWLAPMQVVVMNITDKQADYVQEIVKFFKEQGIRASFDLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
           P +++ GD+E   + + +R        K+ L D
Sbjct: 591 PYLLVVGDQEMENKEVAVRTRDGIDLGKMRLED 623


>gi|219871154|ref|YP_002475529.1| threonyl-tRNA synthetase [Haemophilus parasuis SH0165]
 gi|254783524|sp|B8F5H9|SYT_HAEPS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|219691358|gb|ACL32581.1| threonyl-tRNA synthetase [Haemophilus parasuis SH0165]
          Length = 643

 Score =  625 bits (1612), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 289/619 (46%), Positives = 420/619 (67%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPE 65
           +T PDGS + F    +  +VA+SI   LAK  +A  +NG+  D SD + E  ++EIIT +
Sbjct: 4   ITLPDGSQRQFDNPVSVMEVAQSIGAGLAKATIAGRVNGERRDASDIISEDATLEIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHS AH++  A++ ++P V++AIGP I++GFYYD D ++  + ++L  +E +
Sbjct: 64  DEDGLEIIRHSTAHLLGHAIKQLFPNVKMAIGPTIDNGFYYDIDLDRSLTQEDLDALEAR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K+ +S ++AR+ FES+ E+YK+ IL E+I   +   LY   E+ D+CR
Sbjct: 124 MLELAKTNYDVVKKRVSWQEARDTFESRGESYKMAILDENISKDDRPALYHHEEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKL KVAGAYWRGDS   ML RIYGTAW  +++L  YL+ LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLQKVAGAYWRGDSKNKMLQRIYGTAWADKKQLADYLHRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ + +DL+H+ E+  G++FWH  GW IF+ L +++R K+K  DY+E+  P ++D+ 
Sbjct: 243 DHRKIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW +Y   MF  +  +      R +A+KPMNCPGH+ +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWQNYGDLMFTTQSEN------REYAIKPMNCPGHIQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FC  EQ+ +E      ++  IY  FGFE I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCMPEQVESEVTSCIKMVYDIYSTFGFENI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRP   +G+D +W+ AE  +   L      + + +   +  GEGAFYGPK E+ L
Sbjct: 417 QVKLSTRPANSIGTDEMWNKAEADLAAAL------TANGLAFEIQEGEGAFYGPKIEFAL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D + R+WQCGTIQ+DF LP R +A YV   +++  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 RDCLDREWQCGTIQLDFFLPERLSASYVAEDNDRKTPVMIHRAILGSIERFIGIITEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+QA+V  IT S  EY Q++   L    L ++ D RNE + +K+REH+++++
Sbjct: 531 GFFPAWLAPVQAVVMNITDSQAEYVQQVVKQLSDAGLRVKADLRNEKVGFKVREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++CGDKE +E  + +R
Sbjct: 591 PYMLVCGDKEIAEGKVSVR 609


>gi|261212792|ref|ZP_05927076.1| threonyl-tRNA synthetase [Vibrio sp. RC341]
 gi|260837857|gb|EEX64534.1| threonyl-tRNA synthetase [Vibrio sp. RC341]
          Length = 642

 Score =  625 bits (1612), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 299/642 (46%), Positives = 429/642 (66%), Gaps = 17/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS ++F    +  +VA+SI   LAK  +A  +NG   D  D +  + S+EIIT +
Sbjct: 4   ITLPDGSQRHFDNPVSTLEVAQSIGPGLAKATIAGRVNGARVDACDLIEHDASLEIITTK 63

Query: 66  DP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  A++ ++P  ++AIGP I+ GFYYD D EQ  S ++L +IE 
Sbjct: 64  DEVDGLEIVRHSCAHLLGHALKQLYPNAKMAIGPTIDSGFYYDIDLEQSLSQEDLEKIEA 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLC 183
           +M E+       +K+ +S ++AR+ FES+ E+YK+EIL E++   +   LY   E+ D+C
Sbjct: 124 RMVELAKTKYAVVKKKVSWQEARDTFESRGESYKMEILDENVARDDRPGLYHHEEYIDMC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV   G  + F KL+ +AGAYWRG+S+  ML RIYGTA++ ++ L  +L  LEE+ K
Sbjct: 184 RGPHVPHMGFCQNF-KLLNIAGAYWRGNSDNKMLQRIYGTAFHDKKALQAHLTRLEEAAK 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRK+ +++DLFH+ ++  G++FWH  GW IF+ L  ++R+K+ +  Y+E+  P ++D+
Sbjct: 243 RDHRKIGKQLDLFHMQQEAPGMVFWHHNGWSIFRDLEIFIRQKLNEYGYQEVKGPLMMDR 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y   MF       T  + R +A+KPMNCPGH+ +FN GLKSYR+LP+R+
Sbjct: 303 VLWERSGHWDKYADAMFT------TSSENREYAIKPMNCPGHIQIFNQGLKSYRDLPLRM 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSGSLHG+MRVRGFTQDDAH+FCT++Q+  E      ++   Y  FGF+ 
Sbjct: 357 AEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTEDQIQQEVTSCIKMVYDTYTTFGFQN 416

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+VKLSTRPEKRVGSD +WD +E   + ++D++K      I   +  GEGAFYGPK E+ 
Sbjct: 417 IVVKLSTRPEKRVGSDEIWDKSE---QALIDSLKAMD---IPFEIQEGEGAFYGPKIEFT 470

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D + R WQCGT+Q+DFNLP+R  A YV   +E+  PVMIHRA+ GS+ERFIGI+IE +
Sbjct: 471 LYDCLDRAWQCGTVQLDFNLPTRLGATYVGESNERLIPVMIHRAILGSLERFIGILIEEY 530

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P QA+V  IT    +YA E+A  L+   +  + D RNE I +KIREH++K+
Sbjct: 531 AGFFPTWLAPEQAVVVNITDKQADYAHEVAQKLQKCGIRAKADLRNEKIGFKIREHTLKR 590

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P +++CGD+E     I +R        K  L D I  +  E
Sbjct: 591 VPYMLVCGDQEMEAGEIAVRTRKGKDLGKFKLDDFIEHIQAE 632


>gi|307256244|ref|ZP_07538030.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           10 str. D13039]
 gi|306865263|gb|EFM97160.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           10 str. D13039]
          Length = 643

 Score =  625 bits (1612), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 290/619 (46%), Positives = 420/619 (67%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPE 65
           +T PDGS + F    +  +VA+SI   LAK  +A  +NG+  D  D + E  S+EIIT +
Sbjct: 4   ITLPDGSQRQFDNPVSVMEVAQSIGAGLAKATIAGRVNGERRDACDIISEDSSLEIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ ++P+V++AIGP I++GFYYD D ++  + ++L  IEK+
Sbjct: 64  DEDGLEIIRHSCAHLLGHAIKQLFPDVKMAIGPTIDNGFYYDVDLDRSLTQEDLDAIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M  +   +   +K+ +S ++AR+ FE + E YK+ IL E+I       LY   E+ D+CR
Sbjct: 124 MLGLAKTNYDVVKKRVSWQEARDTFEKRGEPYKMAILDENIERTATPALYLHEEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKL KVAGAYWRGDS   ML RIYGTAW  +++L +YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLQKVAGAYWRGDSKNKMLQRIYGTAWADKKQLAEYLTRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHR++ + +DL+H+ E+  G++FWH  GW IF+ L +++R K+K+ DY+E+  P ++D+ 
Sbjct: 243 DHRRIGKALDLYHMQEEAPGLVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW +Y   MF  +  +      R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWERTGHWQNYADLMFTTQSEN------REYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+ +E      ++  IY  FGF  I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQIESEVTSCIRMVYDIYSTFGFSNI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPE R+G DA+WD AE+ +   L      + + ++  +  GEGAFYGPK E+ L
Sbjct: 417 QVKLSTRPENRIGDDAMWDRAEDGLAKAL------TANGLSYEIQEGEGAFYGPKIEFAL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D + R+WQCGTIQ+DF LP R +A YV   + +  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 RDCLDREWQCGTIQLDFALPGRLDASYVAEDNGRRTPVMIHRAILGSIERFIGIITEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P QA+V  IT S  +Y Q++   L    +  ++D RNE + +K+REH+++++
Sbjct: 531 GFFPTWLAPTQAVVMNITDSQADYVQKVTKALSDAGIRAKSDLRNEKVGFKVREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++CGDKE     + +R
Sbjct: 591 PYMLVCGDKEIEAGKVSVR 609


>gi|24373852|ref|NP_717895.1| threonyl-tRNA synthetase [Shewanella oneidensis MR-1]
 gi|73919825|sp|Q8EER9|SYT_SHEON RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|24348259|gb|AAN55339.1|AE015671_6 threonyl-tRNA synthetase [Shewanella oneidensis MR-1]
          Length = 642

 Score =  625 bits (1612), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 287/633 (45%), Positives = 413/633 (65%), Gaps = 16/633 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  DVA  I   LAK  +A  +NG++ D  D +  +  + IIT +
Sbjct: 4   ITLPDGSKREFAHPVSTLDVAADIGPGLAKACIAGRVNGELKDACDLIETDAELSIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   + ++RHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D E   + D++  +EK+
Sbjct: 64  DEEGIEILRHSCAHLLGHAIKQLWPQTKMAIGPVIDNGFYYDIDLEHKLTQDDIEALEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K+ +S ++AR+ F ++ E YK+ IL E+I       LY   E+ D+CR
Sbjct: 124 MLELAKTNYDVVKRVVSWQEARDTFAARGEEYKIAILDENISKDATPALYHHEEYTDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +  + FKLM +AGAYWRG+S   ML RIYGTAW  ++ L+ YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCQHFKLMSIAGAYWRGNSENKMLQRIYGTAWADKKALSTYLARLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF  L  ++RRK+    Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWSIFLELERFIRRKLNQYTYQEVKGPLMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWERSGHWDKYSEAMFT------TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFG  +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+  E      ++   Y  FGFE I
Sbjct: 357 EFGCCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQVQAEVSSCIQMVYDTYSTFGFENI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+G DA+WD AE  +K  L        + I   +L GEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEKRIGDDAMWDRAEEALKQAL------RANNIEFTILPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+D+ LPSR  A YV   + +  PVMIHRA+ GS+ERF+GI+IE + 
Sbjct: 471 HDCLDRAWQCGTVQLDYALPSRLGATYVAEDNSRQTPVMIHRAILGSLERFLGILIEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+Q +V  IT    +Y +E+    K   +    D RNE I +KIREH+++++
Sbjct: 531 GRFPTWLAPMQVVVMNITDKQADYVEEVVKFFKEQGIRASFDLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
           P +++ GD+E   + + +R        K+ + D
Sbjct: 591 PYLLVVGDQEMENKEVAVRTRDGVDLGKMRIED 623


>gi|153827549|ref|ZP_01980216.1| threonyl-tRNA synthetase [Vibrio cholerae MZO-2]
 gi|153829051|ref|ZP_01981718.1| threonyl-tRNA synthetase [Vibrio cholerae 623-39]
 gi|229514759|ref|ZP_04404220.1| threonyl-tRNA synthetase [Vibrio cholerae TMA 21]
 gi|229522960|ref|ZP_04412374.1| threonyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
 gi|229526102|ref|ZP_04415506.1| threonyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
 gi|229527753|ref|ZP_04417144.1| threonyl-tRNA synthetase [Vibrio cholerae 12129(1)]
 gi|254284959|ref|ZP_04959925.1| threonyl-tRNA synthetase [Vibrio cholerae AM-19226]
 gi|148875480|gb|EDL73615.1| threonyl-tRNA synthetase [Vibrio cholerae 623-39]
 gi|149738482|gb|EDM52878.1| threonyl-tRNA synthetase [Vibrio cholerae MZO-2]
 gi|150424962|gb|EDN16739.1| threonyl-tRNA synthetase [Vibrio cholerae AM-19226]
 gi|229334115|gb|EEN99600.1| threonyl-tRNA synthetase [Vibrio cholerae 12129(1)]
 gi|229336260|gb|EEO01278.1| threonyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
 gi|229340177|gb|EEO05185.1| threonyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
 gi|229348739|gb|EEO13697.1| threonyl-tRNA synthetase [Vibrio cholerae TMA 21]
 gi|327485485|gb|AEA79891.1| Threonyl-tRNA synthetase [Vibrio cholerae LMA3894-4]
 gi|327485490|gb|AEA79896.1| Threonyl-tRNA synthetase [Vibrio cholerae LMA3894-4]
          Length = 642

 Score =  625 bits (1611), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 299/642 (46%), Positives = 429/642 (66%), Gaps = 17/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS ++F    +  +VA+SI   LAK  +A  +NG   D  D +  + S+EIIT +
Sbjct: 4   ITLPDGSQRHFDNPVSTLEVAQSIGPGLAKATIAGRVNGVRVDACDLIEHDASLEIITTK 63

Query: 66  DP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  A++ ++P  ++AIGP I+ GFYYD D EQ  S ++L +IE 
Sbjct: 64  DEVDGLEIVRHSCAHLLGHALKQLYPNAKMAIGPTIDSGFYYDIDLEQSLSQEDLEKIEA 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLC 183
           +M E+       +K+ +S ++AR+ FES+ E+YK+EIL E++   +   LY   E+ D+C
Sbjct: 124 RMVELAKTKYAVVKKKVSWQEARDTFESRGESYKMEILDENVARDDRPGLYHHEEYIDMC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV   G  + F KL+ +AGAYWRG+S+  ML RIYGTA++ ++ L  +L  LEE+ K
Sbjct: 184 RGPHVPHMGFCQNF-KLLNIAGAYWRGNSDNKMLQRIYGTAFHDKKALQAHLTRLEEAAK 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRK+ +++DLFH+ ++  G++FWH  GW IF+ L  ++R+K+ +  Y+E+  P ++D+
Sbjct: 243 RDHRKIGKQLDLFHMQQEAPGMVFWHHNGWSIFRDLEIFIRQKLNEYGYQEVKGPLMMDR 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y   MF       T  + R +A+KPMNCPGH+ +FN GLKSYR+LP+R+
Sbjct: 303 VLWERSGHWDKYADAMFT------TSSENREYAIKPMNCPGHIQIFNQGLKSYRDLPLRM 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSGSLHG+MRVRGFTQDDAH+FCT++Q+  E      ++   Y  FGF+ 
Sbjct: 357 AEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTEDQIQQEVTSCIKMVYDTYTTFGFQN 416

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+VKLSTRPEKRVGSD +WD +E   + ++D++K      I   +  GEGAFYGPK E+ 
Sbjct: 417 IVVKLSTRPEKRVGSDEIWDKSE---QALIDSLKAMD---IPFEIQEGEGAFYGPKIEFT 470

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D + R WQCGT+Q+DFNLP+R  A YV   +E+  PVMIHRA+ GS+ERFIGI+IE +
Sbjct: 471 LYDCLDRAWQCGTVQLDFNLPTRLGATYVGESNERLIPVMIHRAILGSLERFIGILIEEY 530

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P QA+V  IT    +YA E+A  L+   +  + D RNE I +KIREH++K+
Sbjct: 531 AGFFPTWLAPEQAVVVNITDKQADYAHEVAQKLQKCGIRAKADLRNEKIGFKIREHTLKR 590

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P +++CGD+E     I +R        K  L D I  +  E
Sbjct: 591 VPYMLVCGDQEMEAGEIAVRTRKGKDLGKFKLDDFIAHIQAE 632


>gi|127512960|ref|YP_001094157.1| threonyl-tRNA synthetase [Shewanella loihica PV-4]
 gi|166225499|sp|A3QEK0|SYT_SHELP RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|126638255|gb|ABO23898.1| threonyl-tRNA synthetase [Shewanella loihica PV-4]
          Length = 642

 Score =  625 bits (1611), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 291/643 (45%), Positives = 422/643 (65%), Gaps = 17/643 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  DVA  I   LAK  +A  +NG++ D  D +  +  + IIT +
Sbjct: 4   ITLPDGSKREFANAVSTLDVAADIGPGLAKACIAGRVNGELKDACDLIETDVDLAIITVK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   + ++RHSCAH++  A++ +WPE ++AIGP+I++GFYYD D +   + +++A++EK+
Sbjct: 64  DDEGVEILRHSCAHLLGHAIKQMWPETKMAIGPVIDNGFYYDVDLDHKLTEEDVAELEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M  +   +   +K+ +S ++AR+ FES+ E+YK+ IL E+I   +   LY   E+ D+CR
Sbjct: 124 MLALAKTNYDVVKRVVSWQEARDTFESRGESYKMAILDENISKDDQPALYHHEEYTDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKLM VAGAYWRG+S+  ML RIYGTAW  ++ L  +L  LEE+ KR
Sbjct: 184 GPHVPNM-KFCHHFKLMSVAGAYWRGNSDNKMLQRIYGTAWADKKALKAHLTRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW +F  L  ++R+K+    Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWSLFLELERFIRQKLGQYTYQEVKGPLMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWERSGHWDKYSEAMFT------THSENREYAVKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFG  +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+  E      ++   Y  FGF  I
Sbjct: 357 EFGCCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQVQQEVSGCIKMVYDTYATFGFHDI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+G DA+WD AE   + ++D +K +    I   +L GEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEKRIGDDAMWDRAE---QALMDALKAND---IEYEILPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+D+ LP R  A YV   + +  PVMIHRA+ GS+ERF+GI+IE + 
Sbjct: 471 HDCLDRAWQCGTVQLDYALPGRLGATYVAEDNSRQTPVMIHRAILGSLERFLGILIEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+QA+V  IT    EY  E+  L K   +    D RNE I +KIREH+++++
Sbjct: 531 GKFPTWLAPVQAVVMNITDKQSEYVDEVVKLFKDQGIRASKDLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           P +++ GD+E   R + +R        K+  +D    + KE +
Sbjct: 591 PYLLVVGDQEMENREVAVRTRDGVDLGKIK-IDQFAAMVKEQI 632


>gi|56749447|sp|Q7MK65|SYT_VIBVY RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
          Length = 642

 Score =  625 bits (1611), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 290/620 (46%), Positives = 421/620 (67%), Gaps = 17/620 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPE 65
           +T PDGS + F    +  DVA SI   LAK  +A  +NG+  D  D + E  S+EIIT +
Sbjct: 4   ITLPDGSQRQFDNSVSTMDVALSIGPGLAKATIAGRVNGQRVDACDLIEEDASLEIITTK 63

Query: 66  DP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  A++ ++P  ++AIGP I++GFYYD D E+  + ++L +IE 
Sbjct: 64  DEVDGLEIVRHSCAHLLGHALKQLYPNAKMAIGPTIDNGFYYDIDLEESLTQEDLEKIEA 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLC 183
           +M+ +       +K+ +S ++AR+ FE++ E YK+EIL E++   +   LY   E+ D+C
Sbjct: 124 RMKALAKTKYQVIKKKVSWQEARDAFEARGETYKMEILDENVSRDDRPGLYHHEEYIDMC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +     + F L+ VAGAYWRG+S+  ML RIYGTA++ ++ L  +L  LEE+ K
Sbjct: 184 RGPHVPNMS-FCQHFTLLNVAGAYWRGNSDNKMLQRIYGTAFHDKKALKDHLTRLEEAAK 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRK+ +++DLFH+ ++  G++FWH  GW +F+ L  ++R K+ +  Y+E+  P ++D+
Sbjct: 243 RDHRKIGKQLDLFHMQQEAPGMVFWHHNGWSVFRDLEVFIREKLTEYGYQEVKGPLMMDR 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+
Sbjct: 303 VLWERSGHWDKYADAMFT------TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRM 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHG+MRVRGFTQDDAH+FCT+ Q+ +E      ++   Y+ FGF+ 
Sbjct: 357 AEFGSCHRNEPSGALHGIMRVRGFTQDDAHIFCTESQIQDEVTNCIKMVYDTYQTFGFDN 416

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I VKLSTRPE+RVGSD +WD +E  +K  L+++       I   +  GEGAFYGPK E+ 
Sbjct: 417 IAVKLSTRPEQRVGSDEIWDQSEEALKQALESMD------IAYEIQEGEGAFYGPKIEFT 470

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D +GR WQCGT+Q+DFNLP+R  A YV  ++E+  PVMIHRA+ GS+ERFIGI+IE +
Sbjct: 471 LFDCLGRAWQCGTVQLDFNLPNRLGATYVGENNERLVPVMIHRAILGSLERFIGILIEEY 530

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P QA++  IT    +Y QEIA  L+   +  + D RNE I +KIREH++K+
Sbjct: 531 AGFFPTWLAPEQAVIMNITDKQADYVQEIAQKLQKCGIRAKADLRNEKIGFKIREHTLKR 590

Query: 603 IPIIIICGDKEASERSIGIR 622
           +P +++CGD+E     I +R
Sbjct: 591 VPFMLVCGDQEMEAGEIAVR 610


>gi|88859310|ref|ZP_01133950.1| threonyl-tRNA synthetase [Pseudoalteromonas tunicata D2]
 gi|88818327|gb|EAR28142.1| threonyl-tRNA synthetase [Pseudoalteromonas tunicata D2]
          Length = 636

 Score =  625 bits (1611), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 299/641 (46%), Positives = 416/641 (64%), Gaps = 16/641 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPE 65
           +T PDGS + F    +  DVA  I   LAK  +A  ING   D    + E S +EIIT +
Sbjct: 4   ITLPDGSQRQFEHAVSVMDVALDIGPGLAKATIAGRINGVRVDACQLITEDSRLEIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ ++P+V++AIGP I++GFYYD D E   + D+L  +EK+
Sbjct: 64  DDDGLEIIRHSCAHLLGHAIKQLYPDVKMAIGPTIDNGFYYDIDMEHSLTQDDLEALEKQ 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M ++       +K+ ++ ++AR++F ++ E YK+EIL E+I   +   LY   E+ D+CR
Sbjct: 124 MLKLAKTHYDVVKKVVTWQEARDVFAARGEQYKIEILDENISRDDTPGLYHHEEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +  + FK+MKVAGAYWRGDS   ML R+YGTAW  +++L  YL  LEE+EKR
Sbjct: 184 GPHVPNM-KFCEHFKIMKVAGAYWRGDSENKMLQRVYGTAWADKKQLAAYLKRLEEAEKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ + +DL+H  E+  G++FWH  GW I++ L  ++R K+++  YEE+  P ++D+ 
Sbjct: 243 DHRKIGKALDLWHWQEEAPGMVFWHNDGWSIYRELEDFVREKLREYKYEEVKGPLMMDRS 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SGHWD Y   MF       T+ + R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKSGHWDKYADAMFT------TVSEKREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFG  +RNEPSG+LHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++   Y+ FGFEKI
Sbjct: 357 EFGCCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQVMDEVSACIKMVYDTYETFGFEKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPE R+G DA WD +E  +   L      + + I    L GEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPENRIGDDATWDQSEKALAEAL------THNGIEFDYLPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF LP R  A YV  ++E+  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 YDCLDRAWQCGTVQLDFALPGRLGATYVAENNERRTPVMIHRAILGSIERFIGILTEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P Q +V  IT    +Y   I   L         D RNE I +KIREH++K+I
Sbjct: 531 GLFPTWLAPKQVVVMNITDKQADYCHNIVEKLNKLGFRACADLRNEKIGFKIREHTLKRI 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P +++ GDKE  +  + +R        K  + D I  L+ E
Sbjct: 591 PYLLVVGDKEVEQEEVAVRTRTGDDLGKFKVDDFIAKLSDE 631


>gi|147671507|ref|YP_001215778.1| threonyl-tRNA synthetase [Vibrio cholerae O395]
 gi|262168212|ref|ZP_06035910.1| threonyl-tRNA synthetase [Vibrio cholerae RC27]
 gi|172047342|sp|A5EZ18|SYT_VIBC3 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|146313890|gb|ABQ18430.1| threonyl-tRNA synthetase [Vibrio cholerae O395]
 gi|227014955|gb|ACP11164.1| threonyl-tRNA synthetase [Vibrio cholerae O395]
 gi|262023455|gb|EEY42158.1| threonyl-tRNA synthetase [Vibrio cholerae RC27]
          Length = 642

 Score =  625 bits (1611), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 298/642 (46%), Positives = 428/642 (66%), Gaps = 17/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS ++F    +  +VA+SI   LAK  +A  +NG   D  D +  + S+EIIT +
Sbjct: 4   ITLPDGSQRHFDNPVSTLEVAQSIGPGLAKATIAGRVNGARVDACDLIEHDASLEIITTK 63

Query: 66  DP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  A++ ++P  ++AIGP I+ GFYYD D EQ  S ++L +IE 
Sbjct: 64  DEVDGLEIVRHSCAHLLGHALKQLYPNAKMAIGPTIDSGFYYDIDLEQSLSQEDLEKIEA 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLC 183
           +M E+       +K+ +S ++AR+ FES+ E+YK+EIL E++   +   LY   E+ D+C
Sbjct: 124 RMVELAKTKYAVVKKKVSWQEARDTFESRGESYKMEILDENVARDDRPGLYHHEEYIDMC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV   G  + F KL+ +AGAYWRG+S+  ML RIYGTA++ ++ L  +L  LEE+ K
Sbjct: 184 RGPHVPHMGFCQNF-KLLNIAGAYWRGNSDNKMLQRIYGTAFHDKKALQAHLTRLEEAAK 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRK+ +++DLFH+ ++  G++FWH  GW +F+ L  ++R K+ +  Y+E+  P ++D+
Sbjct: 243 RDHRKIGKQLDLFHMQQEAPGMVFWHHNGWSVFRELEIFIRHKLNEYGYQEVKGPLMMDR 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y   MF       T  + R +A+KPMNCPGH+ +FN GLKSYR+LP+R+
Sbjct: 303 VLWERSGHWDKYADAMFT------TSSENREYAIKPMNCPGHIQIFNQGLKSYRDLPLRM 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSGSLHG+MRVRGFTQDDAH+FCT++Q+  E      ++   Y  FGF+ 
Sbjct: 357 AEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTEDQIQQEVTSCIKMVYDTYTTFGFQN 416

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+VKLSTRPEKRVGSD +WD +E   + ++D++K      I   +  GEGAFYGPK E+ 
Sbjct: 417 IVVKLSTRPEKRVGSDEIWDKSE---QALIDSLKAMD---IPFEIQEGEGAFYGPKIEFT 470

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D + R WQCGT+Q+DFNLP+R  A YV   +E+  PVMIHRA+ GS+ERFIGI+IE +
Sbjct: 471 LYDCLDRAWQCGTVQLDFNLPTRLGATYVGESNERLIPVMIHRAILGSLERFIGILIEEY 530

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P QA+V  IT    +YA E+A  L+   +  + D RNE I +KIREH++K+
Sbjct: 531 AGFFPTWLAPEQAVVVNITDKQADYAHEVAQKLQKCGIRAKADLRNEKIGFKIREHTLKR 590

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P +++CGD+E     I +R        K  L D I  +  E
Sbjct: 591 VPYMLVCGDQEMEAGEIAVRTRKGKDLGKFKLDDFIAHIQAE 632


>gi|56707928|ref|YP_169824.1| threonyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110670399|ref|YP_666956.1| threonyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC198]
 gi|224457008|ref|ZP_03665481.1| threonyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|254370416|ref|ZP_04986421.1| hypothetical protein [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254874733|ref|ZP_05247443.1| threonyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|73919791|sp|Q5NGL8|SYT_FRATT RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|123063497|sp|Q14I20|SYT_FRAT1 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|56604420|emb|CAG45450.1| Threonyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110320732|emb|CAL08833.1| Threonyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC198]
 gi|151568659|gb|EDN34313.1| hypothetical protein FTBG_00181 [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254840732|gb|EET19168.1| threonyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|282159111|gb|ADA78502.1| Threonyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           NE061598]
          Length = 634

 Score =  624 bits (1610), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 300/642 (46%), Positives = 426/642 (66%), Gaps = 16/642 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           I + FPDGSI+ F       DVA+SIS SLAK  +A  I+ ++ D  D +     + +IT
Sbjct: 2   INIRFPDGSIREFEAGVNSLDVAKSISPSLAKATMAAYIDDQLKDAKDAINSNCELRLIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +DP  L ++RHSCAH++A AV+ ++P  +V IGP++++GFYYDF  ++     +L  IE
Sbjct: 62  VKDPEGLEILRHSCAHLLAHAVKELYPNTEVTIGPVVDNGFYYDFSFKESIGEADLPTIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           KKM+E+  + +P   + +   +A E F+++ E YKVEI++SI A E + +Y Q  + DLC
Sbjct: 122 KKMKELAKKSAPISYRVVPKAEAIEFFKAQGENYKVEIIDSI-ADEQMKIYTQDNFSDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ +T  V K FKL K+AGAYWRG+S+  ML+RIYGT W T+++L QYL  LEE+EK
Sbjct: 181 RGPHIPNTS-VLKAFKLTKLAGAYWRGNSDNEMLTRIYGTCWATKEDLEQYLNMLEEAEK 239

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQ 302
           RDHRK+ + +DLFH  ED  G+ FWH  G +I++ +  YMR    K    EI TP + D 
Sbjct: 240 RDHRKIGKVLDLFHFQEDSPGIAFWHDNGVRIWRQVEDYMRASNNKYGCSEIRTPLIADF 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LWQ+SGH   Y  NMFA K  +      R FA++PMNCP  V V+N  L SYR+LP+R+
Sbjct: 300 SLWQKSGHASKYAENMFATKSEN------RDFAIRPMNCPTCVQVYNTKLHSYRDLPIRM 353

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFG V+RNEPSGSLHGL+RVR FTQDD H+FCT EQ+  E + +      +YKDFGF  
Sbjct: 354 AEFGIVHRNEPSGSLHGLLRVRSFTQDDGHIFCTPEQVEEEVILMVQQCFEVYKDFGFND 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             VK++ RPE R+G D  WD +E ++K  LD       + ++  +L GEGAFYGPK E+ 
Sbjct: 414 FAVKIALRPENRIGDDETWDKSEQMLKNALDA------NNVSYELLPGEGAFYGPKIEFH 467

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LKDAIGR WQCGTIQ+DF++P R  A Y++ + EK  PVM+HRA+ GS+ERFIG++IE++
Sbjct: 468 LKDAIGRSWQCGTIQLDFSMPQRLGATYIDKNGEKQVPVMLHRAIVGSLERFIGMLIEHY 527

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            GNLPLWL+P+Q  V  I+++  +Y +E+  +L+ + +  + D RNE I +KIREH++ +
Sbjct: 528 AGNLPLWLAPVQVAVMGISNNQDDYCKEVFIMLEKNGIRAKLDLRNEKIGFKIREHTLLR 587

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P ++I G  E  ++ I IR+       ++S+ D    L K+
Sbjct: 588 VPYLVILGKNEQEQKIITIRKHSGEDLGQMSVDDFCAFLDKQ 629


>gi|161831126|ref|YP_001597175.1| threonyl-tRNA synthetase [Coxiella burnetii RSA 331]
 gi|161762993|gb|ABX78635.1| threonyl-tRNA synthetase [Coxiella burnetii RSA 331]
          Length = 660

 Score =  624 bits (1610), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 296/636 (46%), Positives = 427/636 (67%), Gaps = 18/636 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP+   +  PDGS+K F    +   VAESI  SLAK A+A  I+  + D+S  + ++ S+
Sbjct: 10  MPT---IQLPDGSVKQFSKPVSVQAVAESIGTSLAKPALAGKIDDHLVDVSFIIDKDVSL 66

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +DP  L VIRHS AH++A AV+ ++P+ +V IGP++EDGFYYDF  E+ F+ ++L
Sbjct: 67  RIITEKDPEGLEVIRHSAAHLLAHAVKELFPKAEVTIGPVVEDGFYYDFAFERSFTPEDL 126

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IE+KM+ +   D    ++ LS ++A  LF+   E YKVEI+  IP +E +T Y+QG++
Sbjct: 127 EKIEEKMRSLAKADLAVERRVLSRDEALTLFKKMGERYKVEIIRDIPKEEILTAYQQGDF 186

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV  TG +K F KL K+AGAYWRGDSN  ML RIYGTAW   + L  YLY LE
Sbjct: 187 IDLCRGPHVPRTGMLKAF-KLTKLAGAYWRGDSNNEMLQRIYGTAWADTKALKAYLYRLE 245

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+EKRDHR LA++MDLFH   +  G +FWH  GW I   +  Y+R+   K  Y+E++TPQ
Sbjct: 246 EAEKRDHRLLAKKMDLFHFQPESPGNVFWHPNGWSIILQMREYIRQITHKYGYQEVHTPQ 305

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D  LW +SGH + +  ++F++        + + + +KPM+CP HV +FN G+KSYR+L
Sbjct: 306 LIDASLWDKSGHLEKFGDDIFSLPL------EPQQYVIKPMSCPAHVQIFNQGVKSYRDL 359

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R AEFG+ +RNEPSG+LHGLMR+RGF QDDAH+FCT++Q+ +E     + +  +Y DF
Sbjct: 360 PLRYAEFGACHRNEPSGTLHGLMRLRGFVQDDAHIFCTEDQIQSEVSAFIDQLHEVYADF 419

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF +++ KLSTRPEKRVGSD +W  AE  +   L+      +  +   +L GEGAFYGPK
Sbjct: 420 GFTEVIHKLSTRPEKRVGSDEVWTKAEQALAEALN------RKGVEWDILPGEGAFYGPK 473

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ L+D +GR WQCGT+QVDF++P R  A Y+     K  PVMIHRA+ GS ERF+GI+
Sbjct: 474 IEFSLRDCLGRIWQCGTVQVDFSVPERLGAHYIAEDGSKKPPVMIHRAILGSFERFLGIL 533

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           +E   G LPLWL+P+Q +V  IT    +Y  +    L++  +   +D RNE I +KIREH
Sbjct: 534 LEESAGKLPLWLAPVQVVVMNITDRQADYVGQTVENLQNLGIRAHSDLRNEKIGFKIREH 593

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           +I ++P +++ GD+E +++++ +R      +  ++L
Sbjct: 594 TIARVPYLVVIGDREVADKTLSVRALEDEASTTITL 629


>gi|37680129|ref|NP_934738.1| threonyl-tRNA synthetase [Vibrio vulnificus YJ016]
 gi|37198875|dbj|BAC94709.1| threonyl-tRNA synthetase [Vibrio vulnificus YJ016]
          Length = 655

 Score =  624 bits (1610), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 290/620 (46%), Positives = 421/620 (67%), Gaps = 17/620 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPE 65
           +T PDGS + F    +  DVA SI   LAK  +A  +NG+  D  D + E  S+EIIT +
Sbjct: 17  ITLPDGSQRQFDNSVSTMDVALSIGPGLAKATIAGRVNGQRVDACDLIEEDASLEIITTK 76

Query: 66  DP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  A++ ++P  ++AIGP I++GFYYD D E+  + ++L +IE 
Sbjct: 77  DEVDGLEIVRHSCAHLLGHALKQLYPNAKMAIGPTIDNGFYYDIDLEESLTQEDLEKIEA 136

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLC 183
           +M+ +       +K+ +S ++AR+ FE++ E YK+EIL E++   +   LY   E+ D+C
Sbjct: 137 RMKALAKTKYQVIKKKVSWQEARDAFEARGETYKMEILDENVSRDDRPGLYHHEEYIDMC 196

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +     + F L+ VAGAYWRG+S+  ML RIYGTA++ ++ L  +L  LEE+ K
Sbjct: 197 RGPHVPNMS-FCQHFTLLNVAGAYWRGNSDNKMLQRIYGTAFHDKKALKDHLTRLEEAAK 255

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRK+ +++DLFH+ ++  G++FWH  GW +F+ L  ++R K+ +  Y+E+  P ++D+
Sbjct: 256 RDHRKIGKQLDLFHMQQEAPGMVFWHHNGWSVFRDLEVFIREKLTEYGYQEVKGPLMMDR 315

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+
Sbjct: 316 VLWERSGHWDKYADAMFT------TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRM 369

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHG+MRVRGFTQDDAH+FCT+ Q+ +E      ++   Y+ FGF+ 
Sbjct: 370 AEFGSCHRNEPSGALHGIMRVRGFTQDDAHIFCTESQIQDEVTNCIKMVYDTYQTFGFDN 429

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I VKLSTRPE+RVGSD +WD +E  +K  L+++       I   +  GEGAFYGPK E+ 
Sbjct: 430 IAVKLSTRPEQRVGSDEIWDQSEEALKQALESMD------IAYEIQEGEGAFYGPKIEFT 483

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D +GR WQCGT+Q+DFNLP+R  A YV  ++E+  PVMIHRA+ GS+ERFIGI+IE +
Sbjct: 484 LFDCLGRAWQCGTVQLDFNLPNRLGATYVGENNERLVPVMIHRAILGSLERFIGILIEEY 543

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P QA++  IT    +Y QEIA  L+   +  + D RNE I +KIREH++K+
Sbjct: 544 AGFFPTWLAPEQAVIMNITDKQADYVQEIAQKLQKCGIRAKADLRNEKIGFKIREHTLKR 603

Query: 603 IPIIIICGDKEASERSIGIR 622
           +P +++CGD+E     I +R
Sbjct: 604 VPFMLVCGDQEMEAGEIAVR 623


>gi|261339515|ref|ZP_05967373.1| threonine--tRNA ligase [Enterobacter cancerogenus ATCC 35316]
 gi|288318328|gb|EFC57266.1| threonine--tRNA ligase [Enterobacter cancerogenus ATCC 35316]
          Length = 622

 Score =  624 bits (1610), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 290/623 (46%), Positives = 420/623 (67%), Gaps = 16/623 (2%)

Query: 25  DVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAE 83
           DVA  I   LAK  +A  ++G++ D SD +  +  + IIT +D   L +IRHSCAH++  
Sbjct: 2   DVALDIGPGLAKATIAGRVDGELVDASDLIENDAKLSIITAKDEEGLEIIRHSCAHLLGH 61

Query: 84  AVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSH 143
           A++ +WP  ++AIGP+I++GFYYD D +   + +++  +EK+M E+   +   +K+ +S 
Sbjct: 62  AIKQLWPNTKMAIGPVIDNGFYYDVDLDHTLTQEDIDALEKRMHELAESNYDVIKKKVSW 121

Query: 144 EKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMK 202
            +ARE F  + E+YKV IL E+I   +   LY   E+ D+CRGPHV +  +    FKLMK
Sbjct: 122 HEARETFVKRGESYKVSILDENISHDDKPGLYHHEEYIDMCRGPHVPNM-RFCHHFKLMK 180

Query: 203 VAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDG 262
           +AGAYWRGDSN  ML RIYGTAW  ++ L  YL  LEE+ KRDHRK+ +++DL+H+ E+ 
Sbjct: 181 IAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEA 240

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
            G++FWH  GW IF+ L +++R K+K+  Y+E+  P ++D+ LW+++GHWD+Y+  MF  
Sbjct: 241 PGMVFWHNDGWTIFRELETFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFT- 299

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
                T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+AEFGS +RNEPSG+LHGLM
Sbjct: 300 -----TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGLM 354

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALW 441
           RVRGFTQDDAH+FCT++Q+ +E      ++  +Y  FGFEKI+VKLSTRPEKR+GSD  W
Sbjct: 355 RVRGFTQDDAHIFCTEDQVRDEVNACIRMVYDMYSTFGFEKIVVKLSTRPEKRIGSDETW 414

Query: 442 DDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFN 501
           D AE  +   L+      ++ I     LGEGAFYGPK E+ L D + R WQCGT+Q+DF+
Sbjct: 415 DRAEADLAVALE------ENGIPFEYQLGEGAFYGPKIEFTLYDCLDRAWQCGTVQLDFS 468

Query: 502 LPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT 561
           LP R +A YV   +E+  PVMIHRA+ GS+ERFIGI+ E F G  P WL+P+Q +V  IT
Sbjct: 469 LPQRLSASYVGEDNERQVPVMIHRAILGSLERFIGILTEEFAGFFPTWLAPVQVVVMNIT 528

Query: 562 SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
            S  +Y +E+   L++  + ++ D RNE I +KIREH+++++P +++CGDKE     + +
Sbjct: 529 DSQADYVKELTQKLQNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAV 588

Query: 622 RRFGSTTTQKVSLLDAIPILTKE 644
           R         + + + I  L +E
Sbjct: 589 RTRRGKDLGSLDVSEVIEKLQQE 611


>gi|319426373|gb|ADV54447.1| threonyl-tRNA synthetase [Shewanella putrefaciens 200]
          Length = 642

 Score =  624 bits (1610), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 288/633 (45%), Positives = 413/633 (65%), Gaps = 16/633 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  DVA  I   LAK  +A  +NG++ D  D +  +  + IIT +
Sbjct: 4   ITLPDGSKREFAHAVSTLDVAADIGPGLAKACIAGRVNGELKDACDLIETDAELSIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   + ++RHSCAH++  A++ +WPE ++AIGP+I++GFYYD D E   + D++  +EK+
Sbjct: 64  DEEGVEILRHSCAHLLGHAIKQMWPETKMAIGPVIDNGFYYDIDLEHKLTQDDIEALEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M ++   +   +K+ +S ++AR+ F ++ E YK+ IL E+I       LY   E+ D+CR
Sbjct: 124 MLQLAKTNYDVVKRVVSWQEARDTFAARGEEYKIAILDENISKDATPALYHHEEYTDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +  + FKLM +AGAYWRG+S   ML RIYGTAW  ++ L+ +L  LEE+ KR
Sbjct: 184 GPHVPNM-RFCQHFKLMSIAGAYWRGNSENKMLQRIYGTAWADKKALSTHLTRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF  L  ++RRK+    Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWSIFLELERFIRRKLNQYTYQEVKGPLMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWERSGHWDKYSEAMFT------TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFG  +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+  E      ++   Y  FGFE I
Sbjct: 357 EFGCCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQVQEEVSACIQMVYDTYSTFGFENI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+G DA+WD AE  +K  L        + I   +L GEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEKRIGDDAMWDRAEEALKQAL------RANNIEFTLLPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+D+ LP+R  A YV   + +  PVMIHRA+ GS+ERF+GI+IE + 
Sbjct: 471 HDCLDRAWQCGTVQLDYALPNRLGATYVAEDNSRQTPVMIHRAILGSLERFLGILIEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+Q +V  IT    +Y QEI    K   +    D RNE I +KIREH+++++
Sbjct: 531 GRFPTWLAPMQVVVMNITDKQADYVQEIVKFFKEQGIRASFDLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
           P +++ GD+E   + + +R        K+ L D
Sbjct: 591 PYLLVVGDQEMENKEVAVRTRDGIDLGKMRLED 623


>gi|258625495|ref|ZP_05720387.1| threonyl-tRNA synthetase [Vibrio mimicus VM603]
 gi|258582201|gb|EEW07058.1| threonyl-tRNA synthetase [Vibrio mimicus VM603]
          Length = 642

 Score =  624 bits (1610), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 299/642 (46%), Positives = 428/642 (66%), Gaps = 17/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS ++F    +  +VA+SI   LAK  +A  +NG   D  D +  + S+EIIT +
Sbjct: 4   ITLPDGSQRHFDNPVSTLEVAQSIGPGLAKATIAGRVNGARVDACDLIEHDASLEIITTK 63

Query: 66  DP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  A++ ++P  ++AIGP I+ GFYYD D EQ  S ++L +IE 
Sbjct: 64  DEVDGLEIVRHSCAHLLGHALKQLYPNAKMAIGPTIDSGFYYDIDLEQSLSQEDLEKIEA 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLC 183
           +M E+       +K+ +S ++AR+ FES+ E+YK+EIL E++   +   LY   E+ D+C
Sbjct: 124 RMVELAKTKYAVVKKKVSWQEARDTFESRGESYKMEILDENVARDDRPGLYHHEEYIDMC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV   G  + F KL+ VAGAYWRG+S+  ML RIYGTA++ ++ L  +L  LEE+ K
Sbjct: 184 RGPHVPHMGFCQNF-KLLNVAGAYWRGNSDNKMLQRIYGTAFHDKKALQAHLIRLEEAAK 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRK+ +++DLFH+ ++  G++FWH  GW IF+ L  ++R+K+ +  Y+E+  P ++D+
Sbjct: 243 RDHRKIGKQLDLFHMQQEAPGMVFWHHNGWSIFRDLEIFIRQKLNEYGYQEVKGPLMMDR 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y   MF       T  + R +A+KPMNCPGH+ +FN GLKSYR+LP+R+
Sbjct: 303 VLWERSGHWDKYADAMFT------TSSENREYAIKPMNCPGHIQIFNQGLKSYRDLPLRM 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSGSLHG+MRVRGFTQDDAH+FCT++Q+  E      ++   Y  FGF+ 
Sbjct: 357 AEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTEDQIQQEVTSCIKMVYDTYTTFGFQN 416

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+VKLSTRPEKRVGSD +WD +E   + ++D++K      I   +  GEGAFYGPK E+ 
Sbjct: 417 IVVKLSTRPEKRVGSDEIWDKSE---QALIDSLKAME---IPFEIQEGEGAFYGPKIEFT 470

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D + R WQCGT+Q+DFNLP+R  A YV   +E+  PVMIHRA+ GS+ERFIGI+IE +
Sbjct: 471 LYDCLDRAWQCGTVQLDFNLPTRLGATYVGESNERLIPVMIHRAILGSLERFIGILIEEY 530

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P Q +V  IT    +YA E+A  L+   +  + D RNE I +KIREH++K+
Sbjct: 531 AGFFPTWLAPEQVVVVNITDKQADYAHEVAQKLQKCGIRAKADLRNEKIGFKIREHTLKR 590

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P +++CGD+E     I +R        K  L D I  +  E
Sbjct: 591 VPYMLVCGDQEMEAGEIAVRTRKGKDLGKFKLDDFIKHIQAE 632


>gi|221134666|ref|ZP_03560969.1| threonyl-tRNA synthetase [Glaciecola sp. HTCC2999]
          Length = 637

 Score =  624 bits (1610), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 295/633 (46%), Positives = 417/633 (65%), Gaps = 17/633 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  DVA  I   LAK  +A  ING++ D  D +  +  ++IIT  
Sbjct: 4   ITLPDGSTREFDQAVSIMDVANDIGPGLAKATIAGKINGELADACDLITCDAQLQIITAR 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ ++P+V++AIGP I++GFYYD D E   + D+L  IEK+
Sbjct: 64  DEAGLEIIRHSCAHLIGHAIKQLFPDVKMAIGPTIDNGFYYDVDLEHSLTQDDLDNIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M ++       +K   S + AR+ FE + E+YK+EIL E+I   +   LY   E+ D+CR
Sbjct: 124 MLQLAKTSYDVVKNVGSWQTARDTFEQRGESYKLEILDENISQDDTPALYVHEEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +  + FK+MKVAGAYWRG+S   ML RIYGTAW  +++L  YL  LEE+EKR
Sbjct: 184 GPHVPNM-RFCQHFKIMKVAGAYWRGNSENKMLQRIYGTAWADKKQLKAYLNRLEEAEKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ + +DLFH  E+  G++FWH  GW I+  L S++R+K+   DY+E+  P ++D+ 
Sbjct: 243 DHRKIGKTLDLFHWQEEAPGMVFWHNDGWSIYTELESFIRKKLTQYDYQEVKGPLMMDRS 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SGHW  Y +NMF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKSGHWGKYSSNMFT------TESEKREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFG  +RNEPSG+LHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++   Y+ FGFEKI
Sbjct: 357 EFGCCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQILDEVSGCIKMVYDTYETFGFEKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPE+RVGSD +WD  E+ +   L        + I      GEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEERVGSDDIWDKTESALADAL------KANDIEFDYQPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF++P R  + YV    E+  PVMIHRA+ GS+ERFIGI+ E + 
Sbjct: 471 HDCLDRAWQCGTVQLDFSMPGRLGSTYVAEDGERKVPVMIHRAILGSLERFIGILTEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G+ P WL+P QA++  IT    EY  ++    ++  + ++ D RNE I +KIREH++K++
Sbjct: 531 GHFPTWLAPTQAVILNITDKQSEYCTKLQKTARN-AIRVKPDLRNEKIGFKIREHTLKRV 589

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
           P +++ GDKE     + +R        K+S+ D
Sbjct: 590 PYMLVVGDKEMEAGEVAVRTRKGDDLGKMSIED 622


>gi|28898054|ref|NP_797659.1| threonyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|260362413|ref|ZP_05775365.1| threonine--tRNA ligase [Vibrio parahaemolyticus K5030]
 gi|260878403|ref|ZP_05890758.1| threonine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|31340445|sp|Q87Q70|SYT_VIBPA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|28806268|dbj|BAC59543.1| threonyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|308091059|gb|EFO40754.1| threonine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|308115583|gb|EFO53123.1| threonine--tRNA ligase [Vibrio parahaemolyticus K5030]
          Length = 642

 Score =  624 bits (1609), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 297/642 (46%), Positives = 428/642 (66%), Gaps = 17/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPE 65
           +T PDGS + F    +  +VA+SI   LAK  +A  +NG   D  D + E  S+EIIT +
Sbjct: 4   ITLPDGSQRQFDNPVSTMEVAQSIGPGLAKATIAGRVNGNRVDACDLIEEDASLEIITVK 63

Query: 66  DP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  A++ ++P+ ++AIGP I++GFYYD D ++  + ++L +IEK
Sbjct: 64  DEVDGLEIVRHSCAHLLGHALKQLYPQAKMAIGPTIDNGFYYDIDLDESLTQEDLEKIEK 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLC 183
           +M+E+       +K+ +S ++AR+ FES+ E YKVEIL E++   +   LY   E+ D+C
Sbjct: 124 RMKELAKTKYEVVKKKVSWQEARDTFESRGEPYKVEILDENVSRDDRPGLYHHEEYIDMC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV + G   + F L+ VAGAYWRG+S+  ML RIYGTA++ ++ L  +L  LEE+ K
Sbjct: 184 RGPHVPNMG-FCQHFTLLNVAGAYWRGNSDNKMLQRIYGTAFHDKKALKAHLTRLEEAAK 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRK+ +++DLFH+ ++  G++FWH  GW IF+ L  ++R K+ + DY+E+  P ++D+
Sbjct: 243 RDHRKIGKQLDLFHMQQEAPGMVFWHHNGWSIFRDLEVFVRDKLNEYDYQEVKGPLMMDR 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+
Sbjct: 303 VLWERSGHWDKYADAMFT------TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRM 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHG+MRVRGFTQDDAH+FCT+ Q+  E      ++   Y+ FGF+ 
Sbjct: 357 AEFGSCHRNEPSGALHGIMRVRGFTQDDAHIFCTESQIQEEVTSCIKMVYDTYQTFGFDN 416

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+VKLSTRPEKRVGSD +WD +E  +K  L++++      I   +  GEGAFYGPK E+ 
Sbjct: 417 IVVKLSTRPEKRVGSDEIWDQSEEALKQSLESME------IPYEIQEGEGAFYGPKIEFT 470

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D + R WQCGT+Q+DFNLP R  A YV  ++E+  PVMIHRA+ GS+ERFIGI+IE +
Sbjct: 471 LYDCLDRAWQCGTVQLDFNLPGRLGATYVGENNERLVPVMIHRAILGSLERFIGILIEEY 530

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P QA++  IT     Y QEI   L+   +  + D RNE I +KIREH++K+
Sbjct: 531 AGFFPTWLAPEQAVLMNITDKQSGYVQEIVQKLQKSGIRAKADLRNEKIGFKIREHTLKR 590

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P +++ GD+E     I +R        K  + D I  +  E
Sbjct: 591 VPYMLVVGDQEMEAGEIAVRTRKGKDLGKFKVDDFIAYIQDE 632


>gi|120598808|ref|YP_963382.1| threonyl-tRNA synthetase [Shewanella sp. W3-18-1]
 gi|166225502|sp|A1RJI3|SYT_SHESW RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|120558901|gb|ABM24828.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Shewanella sp.
           W3-18-1]
          Length = 642

 Score =  624 bits (1609), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 288/633 (45%), Positives = 412/633 (65%), Gaps = 16/633 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  DVA  I   LAK  +A  +NG++ D  D +  +  + IIT +
Sbjct: 4   ITLPDGSKREFAHAVSTLDVAADIGPGLAKACIAGRVNGELKDACDLIETDAELSIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   + ++RHSCAH++  A++ +WPE ++AIGP+I++GFYYD D E   + D++  +EK+
Sbjct: 64  DEEGVEILRHSCAHLLGHAIKQMWPETKMAIGPVIDNGFYYDIDLEHKLTQDDIEALEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M ++   +   +K+ +S ++AR+ F ++ E YK+ IL E+I       LY   E+ D+CR
Sbjct: 124 MLQLAKTNYDVVKRVVSWQEARDTFAARGEEYKIAILDENISKDATPALYHHEEYTDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +  + FKLM +AGAYWRG+S   ML RIYGTAW  ++ L+ +L  LEE+ KR
Sbjct: 184 GPHVPNM-RFCQHFKLMSIAGAYWRGNSENKMLQRIYGTAWADKKALSTHLTRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF  L  ++RRK+    Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWSIFLELERFIRRKLNQYTYQEVKGPLMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWERSGHWDKYSEAMFT------TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFG  +RNEPSGSLHGLMRVRGFTQDDAH+FCT +Q+  E      ++   Y  FGFE I
Sbjct: 357 EFGCCHRNEPSGSLHGLMRVRGFTQDDAHIFCTDDQVQEEVSACIQMVYDTYSTFGFENI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+G DA+WD AE  +K  L        + I   +L GEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEKRIGDDAMWDRAEEALKQAL------RANNIEFTLLPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+D+ LP+R  A YV   + +  PVMIHRA+ GS+ERF+GI+IE + 
Sbjct: 471 HDCLDRAWQCGTVQLDYALPNRLGATYVAEDNSRQTPVMIHRAILGSLERFLGILIEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+Q +V  IT    +Y QEI    K   +    D RNE I +KIREH+++++
Sbjct: 531 GRFPTWLAPMQVVVMNITDKQADYVQEIVKFFKEQGIRASFDLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
           P +++ GD+E   + + +R        K+ L D
Sbjct: 591 PYLLVVGDQEMENKEVAVRTRDGIDLGKMRLED 623


>gi|187931727|ref|YP_001891712.1| threonyl-tRNA synthetase [Francisella tularensis subsp.
           mediasiatica FSC147]
 gi|238691566|sp|B2SGS3|SYT_FRATM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|187712636|gb|ACD30933.1| threonyl-tRNA synthetase [Francisella tularensis subsp.
           mediasiatica FSC147]
          Length = 634

 Score =  624 bits (1609), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 300/642 (46%), Positives = 426/642 (66%), Gaps = 16/642 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           I + FPDGSI+ F       DVA+SIS SLAK  +A  I+ ++ D  D +     + +IT
Sbjct: 2   INIRFPDGSIREFEAGVNSLDVAKSISPSLAKATMAAYIDDQLKDAKDAINSNCELRLIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +DP  L ++RHSCAH++A AV+ ++P  +V IGP++++GFYYDF  ++     +L  IE
Sbjct: 62  VKDPEGLEILRHSCAHLLAHAVKELYPNTEVTIGPVVDNGFYYDFSFKESIGEADLPTIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           KKM+E+  + +P   + +   +A E F+++ E YKVEI++SI A E + +Y Q  + DLC
Sbjct: 122 KKMKELAKKSAPVSYRVVPKAEAIEFFKAQGENYKVEIIDSI-ADEQMKIYTQDNFSDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ +T  V K FKL K+AGAYWRG+S+  ML+RIYGT W T+++L QYL  LEE+EK
Sbjct: 181 RGPHIPNTS-VLKAFKLTKLAGAYWRGNSDNEMLTRIYGTCWATKEDLEQYLNMLEEAEK 239

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQ 302
           RDHRK+ + +DLFH  ED  G+ FWH  G +I++ +  YMR    K    EI TP + D 
Sbjct: 240 RDHRKIGKVLDLFHFQEDSPGIAFWHDNGVRIWRQVEDYMRASNNKYGCSEIRTPLIADF 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LWQ+SGH   Y  NMFA K  +      R FA++PMNCP  V V+N  L SYR+LP+R+
Sbjct: 300 SLWQKSGHASKYAENMFATKSEN------RDFAIRPMNCPTCVQVYNTKLHSYRDLPIRM 353

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFG V+RNEPSGSLHGL+RVR FTQDD H+FCT EQ+  E + +      +YKDFGF  
Sbjct: 354 AEFGIVHRNEPSGSLHGLLRVRSFTQDDGHIFCTPEQVEEEVILMVQQCFEVYKDFGFND 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             VK++ RPE R+G D  WD +E ++K  LD       + ++  +L GEGAFYGPK E+ 
Sbjct: 414 FAVKIALRPENRIGDDETWDKSEQMLKNALDA------NNVSYELLPGEGAFYGPKIEFH 467

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LKDAIGR WQCGTIQ+DF++P R  A Y++ + EK  PVM+HRA+ GS+ERFIG++IE++
Sbjct: 468 LKDAIGRSWQCGTIQLDFSMPQRLGATYIDKNGEKQVPVMLHRAIVGSLERFIGMLIEHY 527

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            GNLPLWL+P+Q  V  I+++  +Y +E+  +L+ + +  + D RNE I +KIREH++ +
Sbjct: 528 AGNLPLWLAPVQVAVMGISNNQDDYCKEVFIMLEKNGIRAKLDLRNEKIGFKIREHTLLR 587

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P ++I G  E  ++ I IR+       ++S+ D    L K+
Sbjct: 588 VPYLVILGKNEQEQKIITIRKHSGEDLGQMSVDDFCAFLDKQ 629


>gi|85059397|ref|YP_455099.1| threonyl-tRNA synthetase [Sodalis glossinidius str. 'morsitans']
 gi|123738953|sp|Q2NT31|SYT_SODGM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|84779917|dbj|BAE74694.1| threonyl-tRNA synthase [Sodalis glossinidius str. 'morsitans']
          Length = 642

 Score =  624 bits (1609), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 293/640 (45%), Positives = 424/640 (66%), Gaps = 19/640 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS + F    +  DVA  I   LAK  +A  +NGK+ D  D +  +  I IIT +
Sbjct: 4   ITLPDGSQRQFAHPVSPLDVARDIGPGLAKACIAGRVNGKLVDAVDVIEHDAQIAIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ +WP+ ++AIGP+I+ GFYYD D +   + D+L  +EK+
Sbjct: 64  DEAGLEIIRHSCAHLLGHAIKQLWPQTKMAIGPVIDKGFYYDLDLDHTLTQDDLDLLEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+  +D   +K+ +S ++AR+ F ++ E YKV IL E+I   +   LY   E+ D+CR
Sbjct: 124 MHELAEKDYDVIKEKVSWQQARDAFVARGEDYKVAILDENIRRDDRPGLYHHEEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    F L K +GAYWRGDS   ML RIYGTAW  +++L  YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFTLQKTSGAYWRGDSKNKMLLRIYGTAWGDKKQLNTYLQHLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW +F+ L +++R K+K   Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWTLFRELETFVRMKLKAYQYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHWD+Y  +MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWDNYAEHMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+ +E      ++  +Y  FGFEKI
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQVRDEVNNCIKMVYDMYGTFGFEKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+GS+ +W  AE  +   L      +++ I      GEGAFYGPK E+ L
Sbjct: 417 LVKLSTRPEKRIGSNDVWGRAEQDLAAAL------TENGIAFEYQPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF+LP R NA YV  ++E+  PVMIHRA+ GS+ERFIGI+ E + 
Sbjct: 471 LDCLDRAWQCGTVQLDFSLPGRLNASYVGENNERVVPVMIHRAILGSMERFIGILTEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL P Q +V  IT +  EY  ++   L +  + ++ D RNE I +KIREH+++++
Sbjct: 531 GFYPTWLVPTQVVVMNITDNQSEYVAKLTEKLSAAGIRVKADLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           P +++CGDKE     + +R   +   + +  +D   I+TK
Sbjct: 591 PYMLVCGDKEVEACKVAVR---TRRGKDLGSIDVNEIITK 627


>gi|27365716|ref|NP_761244.1| threonyl-tRNA synthetase [Vibrio vulnificus CMCP6]
 gi|31340449|sp|Q8DA13|SYT_VIBVU RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|27361865|gb|AAO10771.1| threonyl-tRNA synthetase [Vibrio vulnificus CMCP6]
          Length = 642

 Score =  624 bits (1609), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 290/620 (46%), Positives = 421/620 (67%), Gaps = 17/620 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPE 65
           +T PDGS + F    +  DVA SI   LAK  +A  +NG+  D  D + E  S+EIIT +
Sbjct: 4   ITLPDGSQRQFDNPVSTMDVALSIGPGLAKATIAGRVNGQRVDACDLIEEDASLEIITTK 63

Query: 66  DP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  A++ ++P  ++AIGP I++GFYYD D E+  + ++L +IE 
Sbjct: 64  DEVDGLEIVRHSCAHLLGHALKQLYPNAKMAIGPTIDNGFYYDIDLEESLTQEDLEKIEA 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLC 183
           +M+ +       +K+ +S ++AR+ FE++ E YK+EIL E++   +   LY   E+ D+C
Sbjct: 124 RMKALAKTKYQVIKKKVSWQEARDAFEARGETYKMEILDENVSRDDRPGLYHHEEYIDMC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +     + F L+ VAGAYWRG+S+  ML RIYGTA++ ++ L  +L  LEE+ K
Sbjct: 184 RGPHVPNMS-FCQHFTLLNVAGAYWRGNSDNKMLQRIYGTAFHDKKALKDHLTRLEEAAK 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRK+ +++DLFH+ ++  G++FWH  GW +F+ L  ++R K+ +  Y+E+  P ++D+
Sbjct: 243 RDHRKIGKQLDLFHMQQEAPGMVFWHHNGWSVFRDLEVFIREKLTEYGYQEVKGPLMMDR 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+
Sbjct: 303 VLWERSGHWDKYADAMFT------TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRM 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHG+MRVRGFTQDDAH+FCT+ Q+ +E      ++   Y+ FGF+ 
Sbjct: 357 AEFGSCHRNEPSGALHGIMRVRGFTQDDAHIFCTESQIQDEVTNCIKMVYDTYQTFGFDN 416

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I VKLSTRPE+RVGSD +WD +E  +K  L+++       I   +  GEGAFYGPK E+ 
Sbjct: 417 IAVKLSTRPEQRVGSDEIWDQSEEALKQALESMD------IAYEIQEGEGAFYGPKIEFT 470

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D +GR WQCGT+Q+DFNLP+R  A YV  ++E+  PVMIHRA+ GS+ERFIGI+IE +
Sbjct: 471 LFDCLGRAWQCGTVQLDFNLPNRLGATYVGENNERLVPVMIHRAILGSLERFIGILIEEY 530

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P QA++  IT    +Y QEIA  L+   +  + D RNE I +KIREH++K+
Sbjct: 531 AGFFPTWLAPEQAVIMNITDKQADYVQEIAQKLQKCGIRAKADLRNEKIGFKIREHTLKR 590

Query: 603 IPIIIICGDKEASERSIGIR 622
           +P +++CGD+E     I +R
Sbjct: 591 VPFMLVCGDQEMEAGEIAVR 610


>gi|320156122|ref|YP_004188501.1| threonyl-tRNA synthetase [Vibrio vulnificus MO6-24/O]
 gi|319931434|gb|ADV86298.1| threonyl-tRNA synthetase [Vibrio vulnificus MO6-24/O]
          Length = 642

 Score =  624 bits (1609), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 290/620 (46%), Positives = 421/620 (67%), Gaps = 17/620 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPE 65
           +T PDGS + F    +  DVA SI   LAK  +A  +NG+  D  D + E  S+EIIT +
Sbjct: 4   ITLPDGSQRQFDNPVSTMDVALSIGPGLAKATIAGRVNGQRVDACDLIEEDASLEIITTK 63

Query: 66  DP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  A++ ++P  ++AIGP I++GFYYD D E+  + ++L +IE 
Sbjct: 64  DEVDGLEIVRHSCAHLLGHALKQLYPNAKMAIGPTIDNGFYYDIDLEESLTQEDLEKIEA 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLC 183
           +M+ +       +K+ +S ++AR+ FE++ E YK+EIL E++   +   LY   E+ D+C
Sbjct: 124 RMKALAKTKYQVIKKKVSWQEARDAFEARGETYKMEILDENVSRDDRPGLYHHEEYIDMC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +     + F L+ VAGAYWRG+S+  ML RIYGTA++ ++ L  +L  LEE+ K
Sbjct: 184 RGPHVPNMS-FCQHFTLLNVAGAYWRGNSDNKMLQRIYGTAFHDKKALKDHLTRLEEAAK 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRK+ +++DLFH+ ++  G++FWH  GW +F+ L  ++R K+ +  Y+E+  P ++D+
Sbjct: 243 RDHRKIGKQLDLFHMQQEAPGMVFWHHNGWSVFRDLEVFIREKLAEYGYQEVKGPLMMDR 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+
Sbjct: 303 VLWERSGHWDKYADAMFT------TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRM 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHG+MRVRGFTQDDAH+FCT+ Q+ +E      ++   Y+ FGF+ 
Sbjct: 357 AEFGSCHRNEPSGALHGIMRVRGFTQDDAHIFCTESQIQDEVTNCIKMVYDTYQTFGFDN 416

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I VKLSTRPE+RVGSD +WD +E  +K  L+++       I   +  GEGAFYGPK E+ 
Sbjct: 417 IAVKLSTRPEQRVGSDEIWDQSEEALKQALESMD------IAYEIQEGEGAFYGPKIEFT 470

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D +GR WQCGT+Q+DFNLP+R  A YV  ++E+  PVMIHRA+ GS+ERFIGI+IE +
Sbjct: 471 LFDCLGRAWQCGTVQLDFNLPNRLGATYVGENNERLVPVMIHRAILGSLERFIGILIEEY 530

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P QA++  IT    +Y QEIA  L+   +  + D RNE I +KIREH++K+
Sbjct: 531 AGFFPTWLAPEQAVIMNITDKQADYVQEIAQKLQKCGIRAKADLRNEKIGFKIREHTLKR 590

Query: 603 IPIIIICGDKEASERSIGIR 622
           +P +++CGD+E     I +R
Sbjct: 591 VPFMLVCGDQEMEAGEIAVR 610


>gi|215919162|ref|NP_820316.2| threonyl-tRNA synthetase [Coxiella burnetii RSA 493]
 gi|206584046|gb|AAO90830.2| threonyl-tRNA synthetase [Coxiella burnetii RSA 493]
          Length = 660

 Score =  624 bits (1609), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 296/636 (46%), Positives = 426/636 (66%), Gaps = 18/636 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP+   +  PDGS+K F    +   VAESI  SLAK A+A  I+  + D+S  + ++ S+
Sbjct: 10  MPT---IQLPDGSVKQFSKPVSVQAVAESIGTSLAKPALAGKIDDHLVDVSFIIDKDVSL 66

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +DP  L VIRHS AH++A AV+ ++P+ +V IGP++EDGFYYDF  E+ F+ ++L
Sbjct: 67  RIITEKDPEGLEVIRHSAAHLLAHAVKELFPKAEVTIGPVVEDGFYYDFAFERSFTPEDL 126

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IE+KM+ +   D    ++ LS ++A  LF+   E YKVEI+  IP +E +T Y+QG++
Sbjct: 127 EKIEEKMRSLAKADLAVERRVLSRDEALTLFKKMGERYKVEIIRDIPKEEILTAYQQGDF 186

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV  TG +K F KL K+AGAYWRGDSN  ML RIYGTAW   + L  YLY LE
Sbjct: 187 IDLCRGPHVPRTGMLKAF-KLTKLAGAYWRGDSNNEMLQRIYGTAWADTKALKAYLYRLE 245

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+EKRDHR LA++MDLFH   +  G +FWH  GW I   +  Y+R    K  Y+E++TPQ
Sbjct: 246 EAEKRDHRLLAKKMDLFHFQPESPGNVFWHPNGWSIILQMREYIRHITHKYGYQEVHTPQ 305

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D  LW +SGH + +  ++F++        + + + +KPM+CP HV +FN G+KSYR+L
Sbjct: 306 LIDASLWDKSGHLEKFGDDIFSLPL------EPQQYVIKPMSCPAHVQIFNQGVKSYRDL 359

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R AEFG+ +RNEPSG+LHGLMR+RGF QDDAH+FCT++Q+ +E     + +  +Y DF
Sbjct: 360 PLRYAEFGACHRNEPSGTLHGLMRLRGFVQDDAHIFCTEDQIQSEVSAFIDQLHEVYADF 419

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF +++ KLSTRPEKRVGSD +W  AE  +   L+      +  +   +L GEGAFYGPK
Sbjct: 420 GFTEVIHKLSTRPEKRVGSDEVWTKAEQALAEALN------RKGVEWDILPGEGAFYGPK 473

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ L+D +GR WQCGT+QVDF++P R  A Y+     K  PVMIHRA+ GS ERF+GI+
Sbjct: 474 IEFSLRDCLGRIWQCGTVQVDFSVPERLGAHYIAEDGSKKPPVMIHRAILGSFERFLGIL 533

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           +E   G LPLWL+P+Q +V  IT    +Y  +    L++  +   +D RNE I +KIREH
Sbjct: 534 LEESAGKLPLWLAPVQVVVMNITDRQADYVGQTVENLQNLGIRAHSDLRNEKIGFKIREH 593

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           +I ++P +++ GD+E +++++ +R      +  ++L
Sbjct: 594 TIARVPYLVVIGDREVADKTLSVRALEDEASTTITL 629


>gi|134301672|ref|YP_001121640.1| threonyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           WY96-3418]
 gi|166223343|sp|A4IX68|SYT_FRATW RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|134049449|gb|ABO46520.1| threonyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           WY96-3418]
          Length = 634

 Score =  624 bits (1608), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 299/642 (46%), Positives = 426/642 (66%), Gaps = 16/642 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           I + FPDGSI+ F       DVA+SIS SLAK  +A  I+ ++ D  D +     + +IT
Sbjct: 2   INIRFPDGSIREFEAGVNSLDVAKSISPSLAKATMAAYIDDQLKDAKDAINSNCELRLIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +DP  L ++RHSCAH++A AV+ ++P  +V IGP++++GFYYDF  ++     +L  IE
Sbjct: 62  VKDPEGLEILRHSCAHLLAHAVKELYPNTEVTIGPVVDNGFYYDFSFKESIGEADLPTIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           KKM+E+  + +P   + +   +A E F+++ E YKVEI++SI A E + +Y Q  + DLC
Sbjct: 122 KKMKELAKKSAPVSYRVVPKAEAIEFFKAQGENYKVEIIDSI-ADEQMKIYTQDNFSDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ +T  V K FKL K+AGAYWRG+S+  ML+RIYGT W T+++L QYL  LEE+EK
Sbjct: 181 RGPHIPNTS-VLKAFKLTKLAGAYWRGNSDNEMLTRIYGTCWATKEDLEQYLNMLEEAEK 239

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQ 302
           RDHRK+ + +DLFH  ED  G+ FWH  G +I++ +  YMR    K    EI TP + D 
Sbjct: 240 RDHRKIGKVLDLFHFQEDSPGIAFWHDNGVRIWRQVEDYMRASNNKYGCSEIRTPLIADF 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LWQ+SGH   Y  NMFA K  +      R FA++PMNCP  V V+N  L SYR+LP+R+
Sbjct: 300 SLWQKSGHASKYAENMFATKSEN------RDFAIRPMNCPTCVQVYNTKLHSYRDLPIRM 353

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFG V+RNEPSGSLHGL+RVR FTQDD H+FCT EQ+  E + +      +YKDFGF  
Sbjct: 354 AEFGIVHRNEPSGSLHGLLRVRSFTQDDGHIFCTPEQVEEEVILMVQQCFEVYKDFGFND 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             +K++ RPE R+G D  WD +E ++K  LD       + ++  +L GEGAFYGPK E+ 
Sbjct: 414 FAIKIALRPENRIGDDETWDKSEQMLKNALDA------NNVSYELLPGEGAFYGPKIEFH 467

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LKDAIGR WQCGTIQ+DF++P R  A Y++ + EK  PVM+HRA+ GS+ERFIG++IE++
Sbjct: 468 LKDAIGRSWQCGTIQLDFSMPQRLGATYIDKNGEKQVPVMLHRAIVGSLERFIGMLIEHY 527

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            GNLPLWL+P+Q  V  I+++  +Y +E+  +L+ + +  + D RNE I +KIREH++ +
Sbjct: 528 AGNLPLWLAPVQVAVMGISNNQDDYCKEVFIMLEKNGIRAKLDLRNEKIGFKIREHTLLR 587

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P ++I G  E  ++ I IR+       ++S+ D    L K+
Sbjct: 588 VPYLVILGKNEQEQKIITIRKHSGEDLGQMSVDDFCAFLDKQ 629


>gi|73919786|sp|Q83C10|SYT_COXBU RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
          Length = 651

 Score =  624 bits (1608), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 296/636 (46%), Positives = 426/636 (66%), Gaps = 18/636 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP+   +  PDGS+K F    +   VAESI  SLAK A+A  I+  + D+S  + ++ S+
Sbjct: 1   MPT---IQLPDGSVKQFSKPVSVQAVAESIGTSLAKPALAGKIDDHLVDVSFIIDKDVSL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +DP  L VIRHS AH++A AV+ ++P+ +V IGP++EDGFYYDF  E+ F+ ++L
Sbjct: 58  RIITEKDPEGLEVIRHSAAHLLAHAVKELFPKAEVTIGPVVEDGFYYDFAFERSFTPEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IE+KM+ +   D    ++ LS ++A  LF+   E YKVEI+  IP +E +T Y+QG++
Sbjct: 118 EKIEEKMRSLAKADLAVERRVLSRDEALTLFKKMGERYKVEIIRDIPKEEILTAYQQGDF 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV  TG +K F KL K+AGAYWRGDSN  ML RIYGTAW   + L  YLY LE
Sbjct: 178 IDLCRGPHVPRTGMLKAF-KLTKLAGAYWRGDSNNEMLQRIYGTAWADTKALKAYLYRLE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+EKRDHR LA++MDLFH   +  G +FWH  GW I   +  Y+R    K  Y+E++TPQ
Sbjct: 237 EAEKRDHRLLAKKMDLFHFQPESPGNVFWHPNGWSIILQMREYIRHITHKYGYQEVHTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D  LW +SGH + +  ++F++        + + + +KPM+CP HV +FN G+KSYR+L
Sbjct: 297 LIDASLWDKSGHLEKFGDDIFSLPL------EPQQYVIKPMSCPAHVQIFNQGVKSYRDL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R AEFG+ +RNEPSG+LHGLMR+RGF QDDAH+FCT++Q+ +E     + +  +Y DF
Sbjct: 351 PLRYAEFGACHRNEPSGTLHGLMRLRGFVQDDAHIFCTEDQIQSEVSAFIDQLHEVYADF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF +++ KLSTRPEKRVGSD +W  AE  +   L+      +  +   +L GEGAFYGPK
Sbjct: 411 GFTEVIHKLSTRPEKRVGSDEVWTKAEQALAEALN------RKGVEWDILPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ L+D +GR WQCGT+QVDF++P R  A Y+     K  PVMIHRA+ GS ERF+GI+
Sbjct: 465 IEFSLRDCLGRIWQCGTVQVDFSVPERLGAHYIAEDGSKKPPVMIHRAILGSFERFLGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           +E   G LPLWL+P+Q +V  IT    +Y  +    L++  +   +D RNE I +KIREH
Sbjct: 525 LEESAGKLPLWLAPVQVVVMNITDRQADYVGQTVENLQNLGIRAHSDLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           +I ++P +++ GD+E +++++ +R      +  ++L
Sbjct: 585 TIARVPYLVVIGDREVADKTLSVRALEDEASTTITL 620


>gi|212212292|ref|YP_002303228.1| threonyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
 gi|212010702|gb|ACJ18083.1| threonyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
          Length = 660

 Score =  624 bits (1608), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 296/636 (46%), Positives = 426/636 (66%), Gaps = 18/636 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP+   +  PDGS+K F    +   VAESI  SLAK A+A  I+  + D+S  + ++ S+
Sbjct: 10  MPT---MQLPDGSVKQFSKPVSVQAVAESIGTSLAKAALAGKIDDHLVDVSFIIDKDVSL 66

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +DP  L VIRHS AH++A AV+ ++P+ +V IGP++EDGFYYDF  E+ F+ ++L
Sbjct: 67  RIITEKDPEGLEVIRHSAAHLLAHAVKELFPKAEVTIGPVVEDGFYYDFAFERSFTPEDL 126

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IE+KM+ +   D    ++ LS ++A  LF+   E YKVEI+  IP +E +T Y+QG++
Sbjct: 127 EKIEEKMRSLAKADLAVERRVLSRDEALTLFKKMGERYKVEIIRDIPKEEILTAYQQGDF 186

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV  TG +K F KL K+AGAYWRGDSN  ML RIYGTAW   + L  YLY LE
Sbjct: 187 IDLCRGPHVPRTGMLKAF-KLTKLAGAYWRGDSNNEMLQRIYGTAWADTKALKAYLYRLE 245

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+EKRDHR LA++MDLFH   +  G +FWH  GW I   +  Y+R    K  Y+E++TPQ
Sbjct: 246 EAEKRDHRLLAKKMDLFHFQPESPGNVFWHPNGWSIILQMREYIRHITHKYGYQEVHTPQ 305

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D  LW +SGH + +  ++F++        + + + +KPM+CP HV +FN G+KSYR+L
Sbjct: 306 LIDASLWDKSGHLEKFGDDIFSLPL------EPQQYVIKPMSCPAHVQIFNQGVKSYRDL 359

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R AEFG+ +RNEPSG+LHGLMR+RGF QDDAH+FCT++Q+ +E     + +  +Y DF
Sbjct: 360 PLRYAEFGACHRNEPSGTLHGLMRLRGFVQDDAHIFCTEDQIQSEVSAFIDQLHEVYADF 419

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF +++ KLSTRPEKRVGSD +W  AE  +   L+      +  +   +L GEGAFYGPK
Sbjct: 420 GFTEVIHKLSTRPEKRVGSDEVWTKAEQALAEALN------RKGVEWDILPGEGAFYGPK 473

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ L+D +GR WQCGT+QVDF++P R  A Y+     K  PVMIHRA+ GS ERF+GI+
Sbjct: 474 IEFSLRDCLGRIWQCGTVQVDFSVPERLGAHYIAEDGSKKPPVMIHRAILGSFERFLGIL 533

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           +E   G LPLWL+P+Q +V  IT    +Y  +    L++  +   +D RNE I +KIREH
Sbjct: 534 LEESAGKLPLWLAPVQVVVMNITDRQADYVGQTVENLQNLGIRAHSDLRNEKIGFKIREH 593

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           +I ++P +++ GD+E +++++ +R      +  ++L
Sbjct: 594 TIARVPYLVVIGDREVADKTLSVRALEDEASTTITL 629


>gi|304408774|ref|ZP_07390395.1| threonyl-tRNA synthetase [Shewanella baltica OS183]
 gi|307302777|ref|ZP_07582532.1| threonyl-tRNA synthetase [Shewanella baltica BA175]
 gi|304352595|gb|EFM16992.1| threonyl-tRNA synthetase [Shewanella baltica OS183]
 gi|306913137|gb|EFN43559.1| threonyl-tRNA synthetase [Shewanella baltica BA175]
          Length = 642

 Score =  623 bits (1607), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 287/633 (45%), Positives = 411/633 (64%), Gaps = 16/633 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  DVA  I   LAK  +A  +NG++ D  D +  +  + IIT +
Sbjct: 4   ITLPDGSKREFAHAVSTLDVAADIGPGLAKACIAGRVNGELKDACDLIETDAELSIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   + ++RHSCAH++  A++ +WPE ++AIGP+I++GFYYD D E   + D++  +EK+
Sbjct: 64  DEEGVEILRHSCAHLLGHAIKQMWPETKMAIGPVIDNGFYYDIDLEHKLTQDDIDALEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M ++   +   +K+ +S ++AR+ F ++ E YK+ IL E+I       LY   E+ D+CR
Sbjct: 124 MLQLAKTNYDVIKRVVSWQEARDTFAARGEDYKIAILDENISKDATPALYHHEEYTDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +  + FKLM +AGAYWRG+S   ML RIYGTAW  ++ L+ +L  LEE+ KR
Sbjct: 184 GPHVPNM-RFCQHFKLMSIAGAYWRGNSENKMLQRIYGTAWADKKALSTHLTRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF  L  ++RRK+    Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWSIFLELERFIRRKLNQYTYQEVKGPLMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWERSGHWDKYSEAMFT------TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFG  +RNEPSGSLHGLMRVRGFTQDDAH+FCT  Q+  E      ++   Y  FGFE I
Sbjct: 357 EFGCCHRNEPSGSLHGLMRVRGFTQDDAHIFCTDSQVQEEVSACIQMVYDTYATFGFENI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+G DA+WD AE  +K  L        + I   +L GEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEKRIGDDAMWDRAEEALKQAL------RDNNIEFTILPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+D+ LPSR  A YV   + +  PVMIHRA+ GS+ERF+GI+IE + 
Sbjct: 471 HDCLDRAWQCGTVQLDYALPSRLGATYVAEDNSRQTPVMIHRAILGSLERFLGILIEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+Q +V  IT    +Y +E+    K   +    D RNE I +KIREH+++++
Sbjct: 531 GRFPTWLAPMQVVVMNITDKQADYVEEVVKFFKEQGIRASFDLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
           P +++ GD+E   + + +R        K+ L D
Sbjct: 591 PYLLVVGDQEMENKEVAVRTRDGIDLGKMRLED 623


>gi|157962084|ref|YP_001502118.1| threonyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
 gi|189083623|sp|A8H4U6|SYT_SHEPA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|157847084|gb|ABV87583.1| threonyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
          Length = 642

 Score =  623 bits (1607), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 286/619 (46%), Positives = 410/619 (66%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPE 65
           +T PDGS + F    +  DVA  I   LAK  +A  +NG++ D  D +   S + IIT +
Sbjct: 4   ITLPDGSKREFAHSVSTLDVAADIGPGLAKACIAGRVNGELKDACDLIETDSDLSIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   + ++RHSCAH++  A++ ++PE ++AIGP+I++GFYYD D +   + +++  +EK+
Sbjct: 64  DEEGVEILRHSCAHLLGHAIKQLFPETKMAIGPVIDNGFYYDIDLDHKLTQEDIDALEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +    K+ +S ++AR+ FES+ E YK+ IL E+IP      LY   E+ D+CR
Sbjct: 124 MAELAKTNYAVDKRVVSWQEARDTFESRGEVYKMAILDENIPKDSTPALYHHEEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +  + FKLM VAGAYWRG+S+  ML R+YGTAW  ++ L  +L  LEE+ KR
Sbjct: 184 GPHVPNM-KFCQNFKLMSVAGAYWRGNSDNKMLQRVYGTAWADKKALKVHLNRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW +F  L  ++R+K+    Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWSLFLELEKFIRQKLGQYTYQEVKGPLMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWERSGHWDKYSEAMFT------TSSENREYAVKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFG  +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+  E      ++   Y+ FGF  I
Sbjct: 357 EFGCCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQVQQEVSACIKMVYDTYETFGFNSI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+G D +WD AE  +K  L        + I   +L GEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEKRIGDDEMWDRAEEALKQALKA------NDIEFEILPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+D+ LP R  A YV   + +  PVMIHRA+ GS+ERF+GI+IE + 
Sbjct: 471 HDCLDRAWQCGTVQLDYALPGRLGATYVAEDNSRQTPVMIHRAILGSLERFLGILIEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WLSP+Q +V  IT    +Y  E+ NL K H +    D RNE I +KIREH+++++
Sbjct: 531 GKFPAWLSPVQVVVMNITDKQSDYVDEVVNLFKEHGIRATKDLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++ GD+E   + + +R
Sbjct: 591 PYLLVVGDQEMENKEVAVR 609


>gi|328472989|gb|EGF43837.1| threonyl-tRNA synthetase [Vibrio parahaemolyticus 10329]
          Length = 642

 Score =  623 bits (1606), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 296/642 (46%), Positives = 428/642 (66%), Gaps = 17/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPE 65
           +T PDGS + F    +  +VA+SI   LAK  +A  +NG   D  D + E  S+EIIT +
Sbjct: 4   ITLPDGSQRQFDNPVSTMEVAQSIGPGLAKATIAGRVNGNRVDACDLIEEDASLEIITVK 63

Query: 66  DP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  A++ ++P+ ++AIGP I++GFYYD D ++  + ++L +IE+
Sbjct: 64  DEVDGLEIVRHSCAHLLGHALKQLYPQAKMAIGPTIDNGFYYDIDLDESLTQEDLEKIEQ 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLC 183
           +M+E+       +K+ +S ++AR+ FES+ E YKVEIL E++   +   LY   E+ D+C
Sbjct: 124 RMKELAKTKYEVVKKKVSWQEARDTFESRGEPYKVEILDENVSRDDRPGLYHHEEYIDMC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV + G   + F L+ VAGAYWRG+S+  ML RIYGTA++ ++ L  +L  LEE+ K
Sbjct: 184 RGPHVPNMG-FCQHFTLLNVAGAYWRGNSDNKMLQRIYGTAFHDKKALKAHLTRLEEAAK 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRK+ +++DLFH+ ++  G++FWH  GW IF+ L  ++R K+ + DY+E+  P ++D+
Sbjct: 243 RDHRKIGKQLDLFHMQQEAPGMVFWHHNGWSIFRDLEVFVRDKLNEYDYQEVKGPLMMDR 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+
Sbjct: 303 VLWERSGHWDKYADAMFT------TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRM 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHG+MRVRGFTQDDAH+FCT+ Q+  E      ++   Y+ FGF+ 
Sbjct: 357 AEFGSCHRNEPSGALHGIMRVRGFTQDDAHIFCTESQIQEEVTSCIKMVYDTYQTFGFDN 416

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+VKLSTRPEKRVGSD +WD +E  +K  L++++      I   +  GEGAFYGPK E+ 
Sbjct: 417 IVVKLSTRPEKRVGSDEIWDQSEEALKQSLESME------IPYEIQEGEGAFYGPKIEFT 470

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D + R WQCGT+Q+DFNLP R  A YV  ++E+  PVMIHRA+ GS+ERFIGI+IE +
Sbjct: 471 LYDCLDRAWQCGTVQLDFNLPGRLGATYVGENNERLVPVMIHRAILGSLERFIGILIEEY 530

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P QA++  IT     Y QEI   L+   +  + D RNE I +KIREH++K+
Sbjct: 531 AGFFPTWLAPEQAVLMNITDKQSGYVQEIVQKLQKSGIRAKADLRNEKIGFKIREHTLKR 590

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P +++ GD+E     I +R        K  + D I  +  E
Sbjct: 591 VPYMLVVGDQEMEAGEIAVRTRKGKDLGKFKVDDFIAYIQDE 632


>gi|126174365|ref|YP_001050514.1| threonyl-tRNA synthetase [Shewanella baltica OS155]
 gi|153000743|ref|YP_001366424.1| threonyl-tRNA synthetase [Shewanella baltica OS185]
 gi|217973356|ref|YP_002358107.1| threonyl-tRNA synthetase [Shewanella baltica OS223]
 gi|166225497|sp|A3D4I2|SYT_SHEB5 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|166225498|sp|A6WNH2|SYT_SHEB8 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|254783536|sp|B8EES6|SYT_SHEB2 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|125997570|gb|ABN61645.1| threonyl-tRNA synthetase [Shewanella baltica OS155]
 gi|151365361|gb|ABS08361.1| threonyl-tRNA synthetase [Shewanella baltica OS185]
 gi|217498491|gb|ACK46684.1| threonyl-tRNA synthetase [Shewanella baltica OS223]
          Length = 642

 Score =  623 bits (1606), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 287/633 (45%), Positives = 411/633 (64%), Gaps = 16/633 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  DVA  I   LAK  +A  +NG++ D  D +  +  + IIT +
Sbjct: 4   ITLPDGSKREFAHAVSTLDVAADIGPGLAKACIAGRVNGELKDACDLIETDAELSIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   + ++RHSCAH++  A++ +WPE ++AIGP+I++GFYYD D E   + D++  +EK+
Sbjct: 64  DEEGVEILRHSCAHLLGHAIKQMWPETKMAIGPVIDNGFYYDIDLEHKLTQDDIDALEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M ++   +   +K+ +S ++AR+ F ++ E YK+ IL E+I       LY   E+ D+CR
Sbjct: 124 MLQLAKTNYDVVKRVVSWQEARDTFAARGEDYKIAILDENISKDATPALYHHEEYTDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +  + FKLM +AGAYWRG+S   ML RIYGTAW  ++ L+ +L  LEE+ KR
Sbjct: 184 GPHVPNM-RFCQHFKLMSIAGAYWRGNSENKMLQRIYGTAWADKKALSTHLTRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF  L  ++RRK+    Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWSIFLELERFIRRKLNQYTYQEVKGPLMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWERSGHWDKYSEAMFT------TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFG  +RNEPSGSLHGLMRVRGFTQDDAH+FCT  Q+  E      ++   Y  FGFE I
Sbjct: 357 EFGCCHRNEPSGSLHGLMRVRGFTQDDAHIFCTDSQVQEEVSACIQMVYDTYATFGFENI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+G DA+WD AE  +K  L        + I   +L GEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEKRIGDDAMWDRAEEALKQAL------RDNNIEFTILPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+D+ LPSR  A YV   + +  PVMIHRA+ GS+ERF+GI+IE + 
Sbjct: 471 HDCLDRAWQCGTVQLDYALPSRLGATYVAEDNSRQTPVMIHRAILGSLERFLGILIEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+Q +V  IT    +Y +E+    K   +    D RNE I +KIREH+++++
Sbjct: 531 GRFPTWLAPMQVVVMNITDKQADYVEEVVKFFKEQGIRASFDLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
           P +++ GD+E   + + +R        K+ L D
Sbjct: 591 PYLLVVGDQEMENKEVAVRTRDGIDLGKMRLED 623


>gi|322833539|ref|YP_004213566.1| threonyl-tRNA synthetase [Rahnella sp. Y9602]
 gi|321168740|gb|ADW74439.1| threonyl-tRNA synthetase [Rahnella sp. Y9602]
          Length = 642

 Score =  623 bits (1606), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 281/619 (45%), Positives = 424/619 (68%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  DVA  I   LAK  +A  +NG++ D +D +  +  + IIT +
Sbjct: 4   ITLPDGSQRVFDRPVSPLDVALDIGPGLAKACIAGRVNGELVDATDLIEVDAQLAIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L ++RHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D ++  + +++  +EK+
Sbjct: 64  DEAGLEILRHSCAHLLGHAIKQLWPDTKMAIGPVIDNGFYYDVDLDRTLTQEDIELLEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+  ++   +K+ +S ++AR+ F S+ E YKV IL E+I   ++  LY   E+ D+CR
Sbjct: 124 MHELAEKNYDVIKKKVSWQEARDTFASRGEEYKVAILDENISHDDHPGLYHHEEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKL K +GAYWRG+S+  ML RIYGTAW  +++L  Y+  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLQKTSGAYWRGNSDNKMLQRIYGTAWADKKQLNAYIQRLEEAGKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF+ L +++R K+K  DY+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEAFVRMKLKSYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW++Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWENYKEAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  FGFEKI
Sbjct: 357 EFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQVRDEVNSCIRMVYDMYSTFGFEKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+G+D +W  AE+ +   L      +++ I      GEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEKRIGTDEMWTRAEDDLAAAL------TENDIPFEYQPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF+LP R NA Y+   +++  PVMIHRA+ GS+ERFIGI+ E + 
Sbjct: 471 HDCLDRAWQCGTVQLDFSLPGRLNASYIGESNDRQVPVMIHRAILGSMERFIGILTEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P W++P+Q ++  IT S   Y +E+   L+   + ++ D RNE I +KIREH+++++
Sbjct: 531 GFFPTWMAPVQVVIMNITDSQATYVEELTKKLQDAGIRVKADLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++CGDKE     + +R
Sbjct: 591 PYMLVCGDKEVEAGKVAVR 609


>gi|307294661|ref|ZP_07574503.1| threonyl-tRNA synthetase [Sphingobium chlorophenolicum L-1]
 gi|306879135|gb|EFN10353.1| threonyl-tRNA synthetase [Sphingobium chlorophenolicum L-1]
          Length = 660

 Score =  623 bits (1606), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 307/661 (46%), Positives = 425/661 (64%), Gaps = 16/661 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           +K+T PDGS++      T +D+A +I   LAK A+A  ++G++ D+  P+  +  + ++T
Sbjct: 2   LKITLPDGSVREVAPGTTPADIAAAIGPGLAKAAIAARVDGELRDIMRPLEADAQLALVT 61

Query: 64  PED-PRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF-DKEQPFSSDELAQ 121
             D   +L + RH  AHI+AEAVQ+++P  Q+  GP  +DGFYYDF  K++PF+ ++L  
Sbjct: 62  GRDEADALELARHDFAHILAEAVQALFPGTQITFGPSTDDGFYYDFAPKDRPFTEEDLPV 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG-EWF 180
           IE KM+EIIA D P  ++    E     ++++ E +K E    +P  E +T+Y  G EW 
Sbjct: 122 IEAKMREIIAADKPLRREVWRREDLIARWQAEGETFKAEWATELPEGEELTVYWSGNEWL 181

Query: 181 DLCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           D+CRGPH+ STG++    FKL +V+GAYWRGD    MLSRIYGT W  +++L  +L  LE
Sbjct: 182 DMCRGPHLASTGKLDPAAFKLTRVSGAYWRGDQKNAMLSRIYGTGWLNRKQLDAHLTRLE 241

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+ KRDHRKL  EMDLFH+ ++  G +FWH KG+ I++ L +YMRR I +  Y E+ TPQ
Sbjct: 242 EAGKRDHRKLGAEMDLFHLQQEAHGSVFWHPKGYLIWRELEAYMRRAIDEAGYREVKTPQ 301

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKD--------LRTFALKPMNCPGHVAVFNH 350
           V+D   W+QSGHW  YR NMF +      ++D            ALKPMNCP H+ +F  
Sbjct: 302 VMDARQWEQSGHWGKYRENMFVIPDEVPNVEDEGPLVSEAADWMALKPMNCPAHILIFKQ 361

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
           G+KSYR+LP+R  E G  +RNEP G+LHGLMRVR FTQDDAH+FC ++Q+  E      L
Sbjct: 362 GIKSYRDLPLRFYENGCCHRNEPHGALHGLMRVRQFTQDDAHIFCREDQIVEEVRAFCAL 421

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
              IYKDFGF    +KL+ RPEKR G++ +WD AE  ++  +     ++ +      L G
Sbjct: 422 ADRIYKDFGF-TYSIKLALRPEKRFGTEEMWDKAEEELRNAVAAAGLNTPE-YGWEELPG 479

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           EGAFY PK E+ L DAIGR WQ GTIQ D  LP R +A YV    E+  PVM+HRA+FGS
Sbjct: 480 EGAFYAPKLEWHLTDAIGRTWQVGTIQSDRVLPERLDASYVGEDGERHRPVMLHRAIFGS 539

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
            ERFIGI+IE++ G  PLWL+P+QA+V TI S A +YAQ +A  L++  +  ETD RNE 
Sbjct: 540 YERFIGILIEHYAGKFPLWLAPVQAVVATIVSDADDYAQTVAEKLRAVGIRAETDVRNEK 599

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDC 650
           INYK+REHS+ K+P +++ G +EA E ++ +R  G      +S+ D I  L KES  PD 
Sbjct: 600 INYKVREHSLAKVPNLLVVGRREADEGTVALRELGKEGQTILSVEDVIARLAKESQAPDM 659

Query: 651 Q 651
           Q
Sbjct: 660 Q 660


>gi|160875442|ref|YP_001554758.1| threonyl-tRNA synthetase [Shewanella baltica OS195]
 gi|189083621|sp|A9L2Q9|SYT_SHEB9 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|160860964|gb|ABX49498.1| threonyl-tRNA synthetase [Shewanella baltica OS195]
 gi|315267632|gb|ADT94485.1| threonyl-tRNA synthetase [Shewanella baltica OS678]
          Length = 642

 Score =  623 bits (1606), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 287/633 (45%), Positives = 411/633 (64%), Gaps = 16/633 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  DVA  I   LAK  +A  +NG++ D  D +  +  + IIT +
Sbjct: 4   ITLPDGSKREFAHAVSTLDVAADIGPGLAKACIAGRVNGELKDACDLIETDAELSIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   + ++RHSCAH++  A++ +WPE ++AIGP+I++GFYYD D E   + D++  +EK+
Sbjct: 64  DEEGVEILRHSCAHLLGHAIKQMWPETKMAIGPVIDNGFYYDIDLEHKLTQDDIDALEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M ++   +   +K+ +S ++AR+ F ++ E YK+ IL E+I       LY   E+ D+CR
Sbjct: 124 MLQLAKTNYDVVKRVVSWQEARDAFAARGEDYKIAILDENISKDATPALYHHEEYTDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +  + FKLM +AGAYWRG+S   ML RIYGTAW  ++ L+ +L  LEE+ KR
Sbjct: 184 GPHVPNM-RFCQHFKLMSIAGAYWRGNSENKMLQRIYGTAWADKKALSTHLTRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF  L  ++RRK+    Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWSIFLELERFIRRKLNQYTYQEVKGPLMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWERSGHWDKYSEAMFT------TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFG  +RNEPSGSLHGLMRVRGFTQDDAH+FCT  Q+  E      ++   Y  FGFE I
Sbjct: 357 EFGCCHRNEPSGSLHGLMRVRGFTQDDAHIFCTDSQVQEEVSACIQMVYDTYATFGFENI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+G DA+WD AE  +K  L        + I   +L GEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEKRIGDDAMWDRAEEALKQAL------RDNNIEFTILPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+D+ LPSR  A YV   + +  PVMIHRA+ GS+ERF+GI+IE + 
Sbjct: 471 HDCLDRAWQCGTVQLDYALPSRLGATYVAEDNSRQTPVMIHRAILGSLERFLGILIEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+Q +V  IT    +Y +E+    K   +    D RNE I +KIREH+++++
Sbjct: 531 GRFPTWLAPMQVVVMNITDKQADYVEEVVKFFKEQGIRASFDLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
           P +++ GD+E   + + +R        K+ L D
Sbjct: 591 PYLLVVGDQEMENKEVAVRTRDGIDLGKMRLED 623


>gi|167855812|ref|ZP_02478565.1| leucyl-tRNA synthetase [Haemophilus parasuis 29755]
 gi|167853091|gb|EDS24352.1| leucyl-tRNA synthetase [Haemophilus parasuis 29755]
          Length = 643

 Score =  623 bits (1606), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 289/619 (46%), Positives = 418/619 (67%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPE 65
           +T PDGS + F    +  +VA+SI   LAK  +A  +NG+  D SD + E  ++EIIT +
Sbjct: 4   ITLPDGSQRQFDNPVSVMEVAQSIGAGLAKATIAGRVNGERRDASDIISEDATLEIITTK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHS AH++  A++ ++P V++AIGP I++GFYYD D ++  + ++L  +E +
Sbjct: 64  DEDGLEIIRHSTAHLLGHAIKQLFPNVKMAIGPTIDNGFYYDIDLDRSLTQEDLDALEAR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K+ +S ++AR+ FES+ E+YK+ IL E+I       LY   E+ D+CR
Sbjct: 124 MLELAKTNYDVVKKRVSWQEARDTFESRGESYKMAILDENISKDYRPALYHHEEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKL KVAGAYWRGDS   ML RIYGTAW  +++L  YL+ LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLQKVAGAYWRGDSKNKMLQRIYGTAWADKKQLADYLHRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ + +DL+H+ E+  G++FWH  GW IF+ L +++R K+K  DY+E+  P ++D+ 
Sbjct: 243 DHRKIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW +Y   MF  +  +      R +A+KPMNCPGH+ +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWQNYGDLMFTTQSEN------REYAIKPMNCPGHIQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FC  EQ+ +E      ++  IY  FGFE I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCMPEQVESEVTSCIKMVYDIYSTFGFENI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRP   +G+D +W+ AE  +   L      + + +   +  GEGAFYGPK E+ L
Sbjct: 417 QVKLSTRPANSIGTDEMWNKAEADLAAAL------TANGLAFEIQEGEGAFYGPKIEFAL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D + R+WQCGTIQ+DF LP R +A YV   + +  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 RDCLDREWQCGTIQLDFFLPERLSASYVAEDNNRKTPVMIHRAILGSIERFIGIITEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+QA+V  IT S  EY Q++   L    L ++ D RNE + +K+REH+++++
Sbjct: 531 GFFPAWLAPVQAVVMNITDSQAEYVQQVVKQLSDAGLRVKADLRNEKVGFKVREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++CGDKE +E  + +R
Sbjct: 591 PYMLVCGDKEIAEGKVSVR 609


>gi|154706797|ref|YP_001424763.1| threonyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
 gi|154356083|gb|ABS77545.1| threonyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
          Length = 660

 Score =  623 bits (1606), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 296/636 (46%), Positives = 425/636 (66%), Gaps = 18/636 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP+   +  PDGS+K F    +   VAESI  SLAK A+A  I+  + D+S  + ++ S+
Sbjct: 10  MPT---IQLPDGSVKQFSKPVSVQAVAESIGTSLAKAALAGKIDDHLVDVSFIIDKDVSL 66

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +DP  L VIRHS AH++A AV+ ++P+ +V IGP++EDGFYYDF  E+ F+ ++L
Sbjct: 67  RIITEKDPEGLEVIRHSAAHLLAHAVKELFPKAEVTIGPVVEDGFYYDFAFERSFTPEDL 126

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IE+KM+ +   D    ++ LS ++A  LF+   E YKVEI+  IP +E +T Y+QG++
Sbjct: 127 EKIEEKMRSLAKADLAVERRVLSRDEALTLFKKMGERYKVEIIRDIPKEEILTAYQQGDF 186

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV  TG +K F KL K+AGAYWRGDSN  ML RIYGTAW   + L  YLY LE
Sbjct: 187 IDLCRGPHVPRTGMLKAF-KLTKLAGAYWRGDSNNEMLQRIYGTAWADTKALKAYLYRLE 245

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+EKRDHR LA++MDLFH   +  G +FWH  GW I   +  Y+R    K  Y+E++TPQ
Sbjct: 246 EAEKRDHRLLAKKMDLFHFQPESPGNVFWHPNGWSIILQMREYIRHITHKYGYQEVHTPQ 305

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D  LW +SGH   +  ++F++        + + + +KPM+CP HV +FN G+KSYR+L
Sbjct: 306 LIDASLWDKSGHLGKFGDDIFSLPL------EPQQYVIKPMSCPAHVQIFNQGVKSYRDL 359

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R AEFG+ +RNEPSG+LHGLMR+RGF QDDAH+FCT++Q+ +E     + +  +Y DF
Sbjct: 360 PLRYAEFGACHRNEPSGTLHGLMRLRGFVQDDAHIFCTEDQIQSEVSAFIDQLHEVYADF 419

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF +++ KLSTRPEKRVGSD +W  AE  +   L+      +  +   +L GEGAFYGPK
Sbjct: 420 GFTEVIHKLSTRPEKRVGSDEVWTKAEQALAEALN------RKGVEWDILPGEGAFYGPK 473

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ L+D +GR WQCGT+QVDF++P R  A Y+     K  PVMIHRA+ GS ERF+GI+
Sbjct: 474 IEFSLRDCLGRIWQCGTVQVDFSVPERLGAHYIAEDGSKKPPVMIHRAILGSFERFLGIL 533

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           +E   G LPLWL+P+Q +V  IT    +Y  +    L++  +   +D RNE I +KIREH
Sbjct: 534 LEESAGKLPLWLAPVQVVVMNITDRQADYVGQTVENLQNLGIRAHSDLRNEKIGFKIREH 593

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           +I ++P +++ GD+E +++++ +R      +  ++L
Sbjct: 594 TIARVPYLVVIGDREVADKTLSVRALEDEASTTITL 629


>gi|165924098|ref|ZP_02219930.1| threonyl-tRNA synthetase [Coxiella burnetii RSA 334]
 gi|165916454|gb|EDR35058.1| threonyl-tRNA synthetase [Coxiella burnetii RSA 334]
          Length = 653

 Score =  622 bits (1605), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 295/636 (46%), Positives = 426/636 (66%), Gaps = 18/636 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP+   +  PDGS+K F    +   VAESI  SLAK A+A  I+  + D+S  + ++ S+
Sbjct: 10  MPT---IQLPDGSVKQFSKPVSVQAVAESIGTSLAKAALAGKIDDHLVDVSFIIDKDVSL 66

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +DP  L VIRHS AH++A AV+ ++P+ +V IGP++EDGFYYDF  E+ F+ ++L
Sbjct: 67  RIITEKDPEGLEVIRHSAAHLLAHAVKELFPKAEVTIGPVVEDGFYYDFAFERSFTPEDL 126

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IE+KM+ +   D    ++ LS ++A  LF+   E YKVEI+  IP +E +T Y+QG++
Sbjct: 127 EKIEEKMRSLAKADLAVERRVLSRDEALTLFKKMGERYKVEIIRDIPKEEILTAYQQGDF 186

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV  TG +K F KL K+AGAYW+GDSN  ML RIYGTAW   + L  YLY LE
Sbjct: 187 IDLCRGPHVPRTGMLKAF-KLTKLAGAYWQGDSNNEMLQRIYGTAWADTKALKAYLYRLE 245

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+EKRDHR LA++MDLFH   +  G +FWH  GW I   +  Y+R    K  Y+E++TPQ
Sbjct: 246 EAEKRDHRLLAKKMDLFHFQPESPGNVFWHPNGWSIILQMREYIRHITHKYGYQEVHTPQ 305

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D  LW +SGH + +  ++F++        + + + +KPM+CP HV +FN G+KSYR+L
Sbjct: 306 LIDASLWDKSGHLEKFGDDIFSLPL------EPQQYVIKPMSCPAHVQIFNQGVKSYRDL 359

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R AEFG+ +RNEPSG+LHGLMR+RGF QDDAH+FCT++Q+ +E     + +  +Y DF
Sbjct: 360 PLRYAEFGACHRNEPSGTLHGLMRLRGFVQDDAHIFCTEDQIQSEVSAFIDQLHEVYADF 419

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF +++ KLSTRPEKRVGSD +W  AE  +   L+      +  +   +L GEGAFYGPK
Sbjct: 420 GFTEVIHKLSTRPEKRVGSDEVWTKAEQALAEALN------RKGVEWDILPGEGAFYGPK 473

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ L+D +GR WQCGT+QVDF++P R  A Y+     K  PVMIHRA+ GS ERF+GI+
Sbjct: 474 IEFSLRDCLGRIWQCGTVQVDFSVPERLGAHYIAEDGSKKPPVMIHRAILGSFERFLGIL 533

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           +E   G LPLWL+P+Q +V  IT    +Y  +    L++  +   +D RNE I +KIREH
Sbjct: 534 LEESAGKLPLWLAPVQVVVMNITDRQADYVGQTVENLQNLGIRAHSDLRNEKIGFKIREH 593

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           +I ++P +++ GD+E +++++ +R      +  ++L
Sbjct: 594 TIARVPYLVVIGDREVADKTLSVRALEDEASTTITL 629


>gi|261867949|ref|YP_003255871.1| threonyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D11S-1]
 gi|261413281|gb|ACX82652.1| threonyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D11S-1]
          Length = 643

 Score =  622 bits (1605), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 298/641 (46%), Positives = 422/641 (65%), Gaps = 16/641 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPE 65
           +T PDGS + F    T  +VA+ I   LAK  +A  +NG+  D  D + E S + IIT +
Sbjct: 4   ITLPDGSQRQFDKPVTVLEVAQDIGVGLAKATIAGRVNGERKDACDLITEDSRVAIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           +   L +IRHS AH++  A++ ++P V++AIGP I++GFYYD D ++  + ++L  +EK+
Sbjct: 64  EEDGLEIIRHSTAHLLGHAIKQLFPNVKMAIGPTIDNGFYYDVDLDRSLTQEDLDALEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K  +S ++AR+ F  + E YK+ IL E+I       LY   E+ D+CR
Sbjct: 124 MLELAKTNYDVIKTPVSWQEARDTFGKRGEPYKMAILDENIERTATPALYHHQEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKL K+AGAYWRGDS   ML RIYGTAW  +++L  YL+ LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLQKIAGAYWRGDSKNKMLQRIYGTAWADKKQLEAYLHRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ + +DL+H+ E+  G++FWH  GW IF+ L +++R K+K  DY+E+  P ++D+ 
Sbjct: 243 DHRKIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW +Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWQNYGDLMFT------TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FC  +Q+ +E      ++  IY  FGFE I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCMPDQVESEVTSCIKMVYDIYSTFGFENI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPEKR+GSD +WD AE       D  K    + ++  +  GEGAFYGPK E+ L
Sbjct: 417 KVKLSTRPEKRIGSDEMWDKAE------ADLAKALEHNSLSYEIQEGEGAFYGPKLEFAL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D++ R+WQCGTIQ+DF LP R NA YV   +E+  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 TDSLDREWQCGTIQLDFFLPERLNASYVGEDNERKVPVMIHRAILGSIERFIGIITEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P Q +V  IT S  EY Q++A  L    L ++TD RNE + +KIREH+++++
Sbjct: 531 GFFPAWLAPTQVVVMNITDSQSEYVQKVAKQLSDAGLRVKTDLRNEKVGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P +++CGDKE     + +R          ++ + + IL K+
Sbjct: 591 PYMLVCGDKEIEAGKVAVRTRKGQDLGTFTVEEFLDILKKQ 631


>gi|212635267|ref|YP_002311792.1| threonyl-tRNA synthetase [Shewanella piezotolerans WP3]
 gi|226701407|sp|B8CME8|SYT_SHEPW RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|212556751|gb|ACJ29205.1| Threonyl-tRNA synthetase, class IIa [Shewanella piezotolerans WP3]
          Length = 642

 Score =  622 bits (1604), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 286/619 (46%), Positives = 413/619 (66%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPE 65
           +T PDGS + F    +  DVA  I   LAK  +A  +NG++ D  D +   S + IIT +
Sbjct: 4   ITLPDGSKREFAQPVSTLDVAADIGPGLAKACIAGRVNGELKDACDIIDTDSELSIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   + ++RHSCAH++  A + +WPE ++AIGP+I++GFYYD D +   + +++  ++K+
Sbjct: 64  DEEGVEILRHSCAHLLGHAFKQLWPEAKMAIGPVIDNGFYYDIDLDHKLTQEDIDALQKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M ++   +    K+ +S ++AR+ FE++ E+YK+EIL E+I       LY   E+ D+CR
Sbjct: 124 MTQLAKTNYAVDKRVVSWQEARDTFEARGESYKIEILDENISKDATPALYHHEEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +  + FKLM VAGAYWRG+S+  ML RIYGTAW  ++ L  +L  LEE+ KR
Sbjct: 184 GPHVPNM-KFCQNFKLMSVAGAYWRGNSDNKMLQRIYGTAWADKKALKVHLNRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW +F  L  ++R+K+    Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWSLFLELEKFIRQKLGQYTYQEVKGPLMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWERSGHWDKYADGMFT------TNSESREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFG  +RNEPSGSLHGLMRVRGFTQDDAHVFCT+EQ+  E      ++   Y+ FGF+ I
Sbjct: 357 EFGCCHRNEPSGSLHGLMRVRGFTQDDAHVFCTEEQVQQEVSACIQMVYDTYETFGFKNI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+G D +WD AE  +K  L +      + I   +L GEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEKRIGDDDMWDRAEEALKQALKS------NDIEFEILPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+D+ LP R  A YV   + +  PVMIHRA+ GS+ERF+GI+IE + 
Sbjct: 471 HDCLDRAWQCGTVQLDYALPGRLGATYVAEDNSRQTPVMIHRAILGSLERFLGILIEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P Q +V  IT    +YA+E+ NL K H +    D RNE I +KIREH+++++
Sbjct: 531 GKFPTWLAPQQVVVMNITDKQSDYAEEVVNLFKEHGIRATKDLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++ GD+E   + + +R
Sbjct: 591 PYLLVVGDQEMENKEVAVR 609


>gi|290475547|ref|YP_003468435.1| threonine tRNA synthetase [Xenorhabdus bovienii SS-2004]
 gi|289174868|emb|CBJ81669.1| threonine tRNA synthetase [Xenorhabdus bovienii SS-2004]
          Length = 642

 Score =  622 bits (1604), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 288/619 (46%), Positives = 418/619 (67%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  DVA  I   LAK  +A  +NG++ D  + +  + ++ IIT +
Sbjct: 4   ITLPDGSQRQFEHAVSVMDVARDIGVGLAKACIAGRVNGELVDACELIETDANLAIITSK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  AV+ +WP+ ++AIGP+I++GFYYD D ++  + +++  +EK+
Sbjct: 64  DENGLEIIRHSCAHLLGHAVKQLWPDTKMAIGPVIDNGFYYDVDLDRSLTQEDIELLEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   D   +K+ +S ++ARE F ++ E YK++IL E+I   +   LY   E+ D+CR
Sbjct: 124 MLELAKTDYDVIKKKVSWQEAREAFAARGEEYKIQILDENISRDDYPGLYHHEEYMDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKL K+AGAYWRG+S+  ML RIYGTAW  +++L  YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLQKIAGAYWRGNSDNKMLQRIYGTAWADKKQLNAYLQRLEEASKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G+ FWH  GW IF+ L ++ R K+K+  Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMAFWHNDGWTIFRELETFARVKLKEYHYQEVKGPFMMDRI 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW++Y+ +MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWENYKEHMFT------TSSENREYCVKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT++Q+  E      +I  +Y  FGFEK+
Sbjct: 357 EFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEDQIHQEVSNCIKMIYDVYNTFGFEKV 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+G++  WD+AE       D  +   Q  I      GEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEKRIGTEKQWDEAE------ADLAEALKQSGIEFEYQPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF+LP+R NA YV  ++E+  PVMIHRAV GS+ERFIGI+ E + 
Sbjct: 471 YDCLDRAWQCGTVQLDFSLPARLNASYVGENNERKVPVMIHRAVLGSLERFIGILTEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P Q +V  IT     Y QE+   L+   +  + D RNE I +KIREH+++++
Sbjct: 531 GFFPTWLAPQQVVVMNITDGQAGYVQELVKKLQDAGIRAKADLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++CGDKE       +R
Sbjct: 591 PYMLVCGDKEVESGKTSVR 609


>gi|270261557|ref|ZP_06189830.1| threonyl-tRNA synthetase [Serratia odorifera 4Rx13]
 gi|270045041|gb|EFA18132.1| threonyl-tRNA synthetase [Serratia odorifera 4Rx13]
          Length = 642

 Score =  622 bits (1603), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 289/644 (44%), Positives = 429/644 (66%), Gaps = 22/644 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS ++F    +  DVA  I   LAK  +A  +NG++ D  D +  +  + IIT +
Sbjct: 4   ITLPDGSQRHFDHAVSPLDVALDIGPGLAKACIAGRVNGELVDAGDLIESDAQLAIITIK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L ++RHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D ++  + ++L  +EK+
Sbjct: 64  DAEGLEIMRHSCAHLLGHAIKQLWPDTKMAIGPVIDNGFYYDVDIDRTLTQEDLDLLEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+  +D   +K+ +S ++AR+ F ++ E YKV IL E+I   +   LY   E+ D+CR
Sbjct: 124 MHELADKDYDVIKKKVSWQEARDTFAARGENYKVAILDENISHDDRPGLYHHEEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKL K +GAYWRGDS   ML RIYGTAW  +++L  YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLQKTSGAYWRGDSKNKMLQRIYGTAWADKKQLNAYLQRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF+ L +++R K+K+  Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEAFVRMKLKEYQYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW++Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+ 
Sbjct: 303 LWEKTGHWENYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMG 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM---FNECLKIHNLIISIYKDFGF 420
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+    NEC++   ++  +Y  FGF
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQVRAEVNECIR---MVYDVYGTFGF 413

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           EKI VKLSTRPEKR+G+D +W  AE  +   L      +++ I      GEGAFYGPK E
Sbjct: 414 EKIAVKLSTRPEKRIGTDDMWTRAEEDLAAAL------TENGIPFEYQPGEGAFYGPKIE 467

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           + L D + R WQCGT+Q+DF LP R  A YV  ++++  PVMIHRA+ GS+ERFIGI+ E
Sbjct: 468 FTLHDCLDRAWQCGTVQLDFFLPGRLGASYVGENNDRVVPVMIHRAILGSMERFIGILTE 527

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
            + G  P W++P+Q +V  IT S  +Y Q++   L+   + ++ D RNE I +KIREH++
Sbjct: 528 EYAGFYPTWIAPVQVVVMNITDSQSDYVQQLTKKLQEAGIRVKADLRNEKIGFKIREHTL 587

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +++P +++CGDKE     + +R         + + + +  L KE
Sbjct: 588 RRVPYMLVCGDKEVESGKVAVRTRRGKDLGSLDVNEVVDKLLKE 631


>gi|94495624|ref|ZP_01302204.1| threonyl-tRNA synthetase [Sphingomonas sp. SKA58]
 gi|94425012|gb|EAT10033.1| threonyl-tRNA synthetase [Sphingomonas sp. SKA58]
          Length = 665

 Score =  621 bits (1602), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 301/666 (45%), Positives = 429/666 (64%), Gaps = 21/666 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           +K+T PDGS++      T +D+A +I   LAK A+A  ++G++ D+  P+ E + + ++T
Sbjct: 2   LKITLPDGSVREVAPGTTPADIAAAIGPGLAKAAIAARVDGELRDIGRPLEEDAHLALVT 61

Query: 64  PE-DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF-DKEQPFSSDELAQ 121
            + +  +L + RH  AH++AEAVQ+++P  Q+  GP  EDGFYYDF  K++PF+ ++L  
Sbjct: 62  AKNEADALELARHDFAHVLAEAVQALFPGTQITFGPATEDGFYYDFAPKDRPFTEEDLPA 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR------ 175
           IE +M++IIA D P  ++ +  +     +E+  E +K +    +P  E +T+Y       
Sbjct: 122 IEAEMRKIIAADKPLKREVIDRDTLIAQWEAAGETFKAQWAAELPQGEELTVYHSGAPGS 181

Query: 176 QGEWFDLCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
           +G W+D+CRGPH+ STG++  + F+L +V+GAYWRGD    MLSRIYGT W  +++L ++
Sbjct: 182 EGSWYDMCRGPHLASTGKLDPQAFRLTRVSGAYWRGDQKNAMLSRIYGTGWLNKKQLAEH 241

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEE 293
           L  LEE+ KRDHRKL  EMDLFH+ ++  G +FWH KG+ I++ L +YMRR I D  Y E
Sbjct: 242 LTRLEEAGKRDHRKLGAEMDLFHLQQEAHGSVFWHPKGYVIWRNLEAYMRRAIDDAGYRE 301

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD--------LRTFALKPMNCPGHV 345
           + TPQV+D   W+QSGHW  YR NMF +      ++D            ALKPMNCP HV
Sbjct: 302 VKTPQVMDARQWEQSGHWGKYRENMFVIPDEVPNVEDEGPLVSDDADWMALKPMNCPAHV 361

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +F  G+KSYR+LP+R  E G  +RNEP G+LHGLMRVR FTQDDAH+FC ++Q+  E  
Sbjct: 362 LIFRQGIKSYRDLPLRFYENGCCHRNEPHGALHGLMRVRQFTQDDAHIFCREDQIVEEVR 421

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
               L   IYKDFGF    +KL+ RPEKR G++ +WD AE  ++  +     ++ D    
Sbjct: 422 AFCALADRIYKDFGF-TYSIKLALRPEKRFGTEEMWDKAEEELRNAVAAAGLNTPD-YGW 479

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
             L GEGAFY PK E+ L DAIGR WQ GTIQ D  LP R +A Y+    E+  PVM+HR
Sbjct: 480 EELPGEGAFYAPKLEWHLTDAIGRTWQVGTIQSDRVLPERLDASYIGEDGERHRPVMLHR 539

Query: 526 AVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD 585
           A+FGS ERFIGI+IE++ G  PLWL+P+QA+V TI S A +YA+   + L++  +  E D
Sbjct: 540 AIFGSYERFIGILIEHYAGKFPLWLAPVQAVVATIVSDADDYAKATVDRLRAAGIRAELD 599

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
            RNE INYK+REHS+ K+P +++ G +EA E ++ +R  G      +SL D I  L KE+
Sbjct: 600 TRNEKINYKVREHSLAKVPNLLVVGRREADEGTVALRELGKDGQSVLSLDDVIARLEKEA 659

Query: 646 LPPDCQ 651
            PPD +
Sbjct: 660 SPPDMR 665


>gi|331007295|ref|ZP_08330496.1| Threonyl-tRNA synthetase [gamma proteobacterium IMCC1989]
 gi|330418902|gb|EGG93367.1| Threonyl-tRNA synthetase [gamma proteobacterium IMCC1989]
          Length = 640

 Score =  621 bits (1602), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 291/619 (47%), Positives = 417/619 (67%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS ++F    +  +VA  I   LAK  +A ++NG   D  DP+  +  + I T +
Sbjct: 4   ITLPDGSQRSFDRPVSVYEVAADIGPGLAKATIAGSVNGVRVDAHDPIENDAELTIFTSK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L ++RHSCAH++  AV+ +WPE ++AIGP IE+GFYYD D +   + +++ +IEK+
Sbjct: 64  DEDGLEILRHSCAHLIGHAVKQLWPEAKMAIGPTIENGFYYDIDLDHMLTDEDMDKIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE-SIPAKENVTLYRQGEWFDLCR 184
           M+E+I      +K+  S + A + F+++ E YK+EILE  IP      LY   E+ D+CR
Sbjct: 124 MRELIKTQYDVVKKVGSWQDAYDAFKARGEEYKLEILERDIPKDATPALYHHEEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +  + FKLM+++GAYWRGDS+  ML RIYGTAW  +++L  +L+FLEE+ KR
Sbjct: 184 GPHVPNM-KFCEHFKLMRISGAYWRGDSDNKMLQRIYGTAWPDKKKLKAHLHFLEEAVKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQH 303
           DHRKL ++ D FH+ E+  G++FWH KGW I+ T+  YMR+  +D+ Y+EI TPQV+D+ 
Sbjct: 243 DHRKLGKKFDYFHMQEEAPGMVFWHPKGWSIYATIEEYMRKVQRDNGYKEIKTPQVVDRS 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SGHWD +R NMF V+       + R +A+KPMNCP HV VFN GLKSY+ELP+RLA
Sbjct: 303 LWERSGHWDKFRDNMFTVES------ESRDYAIKPMNCPCHVQVFNQGLKSYKELPLRLA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNE SG+L GLMRVRGF QDDAH+FC++E +  E     +L+  +Y DFGF  +
Sbjct: 357 EFGSCHRNEASGTLQGLMRVRGFVQDDAHIFCSEEAIQEEVSVFTDLLYKVYADFGFSDV 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +++LSTRPE+RVG++  WD AE  +   LD      ++      L GEGAFYGPK E+ L
Sbjct: 417 IIRLSTRPEQRVGTEEGWDKAEKALADALDAKGLPWEE------LPGEGAFYGPKIEFSL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D + R WQCGTIQVDF++P R +A YV     +  PVM+HRA+ GS ERFIGI+IE+++
Sbjct: 471 RDCLNRVWQCGTIQVDFSMPGRLDAQYVAEDGSRQVPVMLHRAILGSFERFIGILIEHYE 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P Q  +  IT +  EY Q+    L+     + +D RNE I +KIREH++++I
Sbjct: 531 GAFPTWLAPEQVAILNITDNQSEYVQKTEKALRDKGFRVISDLRNEKIGFKIREHTLQRI 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++ GDKE    ++ +R
Sbjct: 591 PYLLVIGDKEVENNALAVR 609


>gi|123965897|ref|YP_001010978.1| threonyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515]
 gi|166225479|sp|A2BVR0|SYT_PROM5 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|123200263|gb|ABM71871.1| Threonyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515]
          Length = 638

 Score =  621 bits (1602), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 297/619 (47%), Positives = 426/619 (68%), Gaps = 15/619 (2%)

Query: 6   KLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITP 64
           K+T PDG+ K F    T  D+A+SI   LAK  +A  +N  + D + P++  S + IIT 
Sbjct: 3   KITLPDGTKKVFEKAVTTLDIAKSIGAGLAKATIAGKVNNVLFDATLPIKNDSKVVIITS 62

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
            D   + +IRHS AH++  AV+ I+P +++AIGP+IEDGFYYD   E  F+ ++L +IE+
Sbjct: 63  RDKEGIEIIRHSFAHLIGHAVKQIYPNIKMAIGPVIEDGFYYDIFSEYRFTPEDLIKIEE 122

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
           ++ ++I +D       +S ++A + F+ + E +K+ I+E I  K+++ LY+  E+ D+CR
Sbjct: 123 RINQLIRKDYDVEVLQVSKQEAIKTFKERDEIFKLRIIEEIDEKDSINLYKHEEYIDMCR 182

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +T  ++ F KL+K++G+YWRGDS    L RIYGTAW+ +++LT YL  +EE+EKR
Sbjct: 183 GPHVPNTRHLRHF-KLLKLSGSYWRGDSKNESLQRIYGTAWSKEKDLTNYLKRIEEAEKR 241

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQH 303
           DHRKL ++  LFHI E+  G+IFWH  GW I+Q L  Y+R  + K++Y EI TPQ +D+ 
Sbjct: 242 DHRKLGKKHSLFHIQEESPGMIFWHPNGWIIYQILEKYIREILRKNEYLEIKTPQAVDKS 301

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SGHW+ +R +MF       T  + RT+A+KPMNCP H+ VFN GLKSY++LP+RLA
Sbjct: 302 LWEKSGHWEKFRDDMFT------TASENRTYAIKPMNCPCHIQVFNQGLKSYKDLPLRLA 355

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSG+LHGLMRVR FTQDDAH+FCT+EQ+  E     +L+  +Y  FGF++I
Sbjct: 356 EFGSCHRNEPSGALHGLMRVRNFTQDDAHIFCTEEQIQEEVSTFIDLVFEVYNTFGFDEI 415

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           ++KLSTRPEKRVGS+ +WD +E  +   L+  KN     +   +  GEGAFYGPK E+ L
Sbjct: 416 IIKLSTRPEKRVGSEDIWDKSEEALTEALNN-KN-----LKWELQPGEGAFYGPKIEFSL 469

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           KD + R WQCGTIQVDF++P R +A +V+ ++EK  PVM+HRA+ GS ERFIGI+IE ++
Sbjct: 470 KDCLNRIWQCGTIQVDFSMPVRLDATFVDINNEKKSPVMLHRAILGSFERFIGILIEQYE 529

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
              P+WL+P Q I+ +IT   ++   E  NLL +     + D RNE I YKIRE ++ +I
Sbjct: 530 AKFPIWLAPTQIILLSITERNIKKCIEFNNLLNTKGYRSKIDIRNEKIGYKIRESTLARI 589

Query: 604 PIIIICGDKEASERSIGIR 622
           P+I I GDKE    S+ +R
Sbjct: 590 PLIGIVGDKEQELNSVTLR 608


>gi|269963856|ref|ZP_06178168.1| threonyl-tRNA synthetase [Vibrio harveyi 1DA3]
 gi|269831343|gb|EEZ85490.1| threonyl-tRNA synthetase [Vibrio harveyi 1DA3]
          Length = 655

 Score =  621 bits (1601), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 295/642 (45%), Positives = 427/642 (66%), Gaps = 17/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPE 65
           +T PDGS + F    +  +VA+SI   LAK  +A  +NG   D  D + E  S+EIIT +
Sbjct: 17  ITLPDGSQRQFDNPVSTMEVAQSIGPGLAKATIAGRVNGNRVDACDLIEEDASLEIITVK 76

Query: 66  DP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  A++ ++P+ ++AIGP I++GFYYD D ++  + ++L +IEK
Sbjct: 77  DEVDGLEIVRHSCAHLLGHALKQLYPQAKMAIGPTIDNGFYYDIDLDESLTQEDLEKIEK 136

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLC 183
           +M+E+       +K+ +S ++AR+ FES+ E YKVEIL E++   +   LY   E+ D+C
Sbjct: 137 RMKELAKTKYEVVKKKVSWQEARDTFESRGEPYKVEILDENVSRDDRPGLYHHEEYIDMC 196

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +     + F L+ VAGAYWRG+S+  ML RIYGTA++ ++ L  +L  LEE+ K
Sbjct: 197 RGPHVPNMS-FCQHFTLLNVAGAYWRGNSDNKMLQRIYGTAFHDKKALKAHLTRLEEAAK 255

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRK+ +++DLFH+ ++  G++FWH  GW +F+ L  ++R K+ +  Y+E+  P ++D+
Sbjct: 256 RDHRKIGKQLDLFHMQQEAPGMVFWHHNGWSVFRDLEVFIRSKLDEYGYQEVKGPLMMDR 315

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+
Sbjct: 316 VLWERSGHWDKYADAMFT------TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRM 369

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHG+MRVRGFTQDDAH+FCT+ Q+  E      ++   Y+ FGF+ 
Sbjct: 370 AEFGSCHRNEPSGALHGIMRVRGFTQDDAHIFCTESQIQEEVTNCIKMVYDTYQTFGFDN 429

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+VKLSTRPEKRVGSD +WD +E  +K  L++++      I   +  GEGAFYGPK E+ 
Sbjct: 430 IVVKLSTRPEKRVGSDEIWDQSEEALKQSLESME------IPYEIQEGEGAFYGPKIEFT 483

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D + R WQCGT+Q+DFNLP R  A YV  ++E+  PVMIHRA+ GS+ERFIGI+IE +
Sbjct: 484 LYDCLDRAWQCGTVQLDFNLPGRLGATYVGENNERLVPVMIHRAILGSLERFIGILIEEY 543

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P QAI+  IT    EY QE+   L+   +  + D RNE I +KIREH++K+
Sbjct: 544 AGFFPTWLAPEQAILMNITDKQSEYVQEVVQKLQKSGIRAKADLRNEKIGFKIREHTLKR 603

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P +++ GD+E     I +R        K  + D I  +  E
Sbjct: 604 VPYMLVVGDQEMEAGEIAVRTRKGKDLGKFKVDDFIAYIQDE 645


>gi|157370384|ref|YP_001478373.1| threonyl-tRNA synthetase [Serratia proteamaculans 568]
 gi|166987325|sp|A8GDQ5|SYT_SERP5 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|157322148|gb|ABV41245.1| threonyl-tRNA synthetase [Serratia proteamaculans 568]
          Length = 642

 Score =  621 bits (1601), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 288/644 (44%), Positives = 429/644 (66%), Gaps = 22/644 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS ++F    +  DVA  I   LAK  +A  +NG++ D  D +  +  + IIT +
Sbjct: 4   ITLPDGSQRHFDHPVSPLDVARDIGPGLAKACIAGRVNGELVDAGDLIESDAQLAIITIK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L ++RHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D ++  + ++L  +EK+
Sbjct: 64  DAEGLEIMRHSCAHLLGHAIKQLWPDTKMAIGPVIDNGFYYDVDIDRTLTQEDLDLLEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+  +D   +K+ +S ++AR+ F ++ E YKV IL E+I   +   LY   E+ D+CR
Sbjct: 124 MHELADKDYDVIKKKVSWQEARDTFAARGEDYKVAILDENISHDDRPGLYHHEEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKL K +GAYWRGDS   ML RIYGTAW  +++L  YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLQKTSGAYWRGDSKNKMLQRIYGTAWADKKQLNAYLQRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF+ L +++R K+K+  Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEAFVRMKLKEYQYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW++Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+ 
Sbjct: 303 LWEKTGHWENYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMG 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM---FNECLKIHNLIISIYKDFGF 420
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+    NEC++   ++  +Y  FGF
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQVRAEVNECIR---MVYDVYGTFGF 413

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           +KI VKLSTRPEKR+G+D +W  AE  +   L      +++ I      GEGAFYGPK E
Sbjct: 414 DKIAVKLSTRPEKRIGTDDMWTRAEEDLAAAL------TENGIPFEYQPGEGAFYGPKIE 467

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           + L D + R WQCGT+Q+DF LP R  A YV  ++++  PVMIHRA+ GS+ERFIGI+ E
Sbjct: 468 FTLHDCLDRAWQCGTVQLDFFLPGRLGASYVGENNDRVVPVMIHRAILGSMERFIGILTE 527

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
            + G  P W++P+Q +V  IT S  +Y Q++   L+   + ++ D RNE I +KIREH++
Sbjct: 528 EYAGFYPTWIAPVQVVVMNITDSQSDYVQQLTKKLQDAGIRVKADLRNEKIGFKIREHTL 587

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +++P +++CGDKE     + +R         + + + +  L KE
Sbjct: 588 RRVPYMLVCGDKEVESGKVAVRTRRGKDLGSLDVNEVVDKLLKE 631


>gi|113970292|ref|YP_734085.1| threonyl-tRNA synthetase [Shewanella sp. MR-4]
 gi|117920487|ref|YP_869679.1| threonyl-tRNA synthetase [Shewanella sp. ANA-3]
 gi|123029660|sp|Q0HIT9|SYT_SHESM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|166225501|sp|A0KWV4|SYT_SHESA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|113884976|gb|ABI39028.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Shewanella sp.
           MR-4]
 gi|117612819|gb|ABK48273.1| threonyl-tRNA synthetase [Shewanella sp. ANA-3]
          Length = 642

 Score =  620 bits (1600), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 285/633 (45%), Positives = 412/633 (65%), Gaps = 16/633 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  DVA  I   LAK  +A  +NG++ D  D +  +  + IIT +
Sbjct: 4   ITLPDGSKREFAHPVSTLDVAADIGPGLAKACIAGRVNGELKDACDLIETDAELSIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   + ++RHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D E   + +++  +EK+
Sbjct: 64  DEEGIEILRHSCAHLLGHAIKQLWPQTKMAIGPVIDNGFYYDIDLEHKLTQEDIEALEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K+ +S ++AR+ F ++ E YK+ IL E+I       LY   E+ D+CR
Sbjct: 124 MLELAKTNYDVVKRVVSWQEARDTFAARGEEYKIAILDENISKDATPALYHHEEYTDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKLM +AGAYWRG+S   ML RIYGTAW  ++ L+ +L  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLMSIAGAYWRGNSENKMLQRIYGTAWADKKALSTHLARLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF  L  ++RRK+    Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWSIFLELERFIRRKLNQYTYQEVKGPLMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWERSGHWDKYSEAMFT------TSSENREYAVKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFG  +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+  E      ++   Y  FGFE I
Sbjct: 357 EFGCCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQVQAEVSSCIQMVYDTYSTFGFENI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+G DA+WD AE  +K  L        + I   +L GEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEKRIGDDAMWDRAEEALKQAL------RANNIEFTILPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+D+ LPSR  A YV   + +  PVMIHRA+ GS+ERF+GI+IE + 
Sbjct: 471 HDCLDRAWQCGTVQLDYALPSRLGATYVAEDNSRQTPVMIHRAILGSLERFLGILIEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+Q +V  IT    +Y +E+    K   +    D RNE I +KIREH+++++
Sbjct: 531 GRFPTWLAPMQVVVMNITDKQADYVEEVVKFFKEQGIRASFDLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
           P +++ GD+E   + + +R        K+ + D
Sbjct: 591 PYLLVVGDQEMENKEVAVRTRDGVDLGKMRIED 623


>gi|89256700|ref|YP_514062.1| threonyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           LVS]
 gi|156502860|ref|YP_001428925.1| threonyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FTNF002-00]
 gi|167010452|ref|ZP_02275383.1| threonyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FSC200]
 gi|254368007|ref|ZP_04984027.1| threonyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           257]
 gi|290954131|ref|ZP_06558752.1| threonyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           URFT1]
 gi|295312449|ref|ZP_06803221.1| threonyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           URFT1]
 gi|122999730|sp|Q2A2J0|SYT_FRATH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|166223341|sp|A7NDB6|SYT_FRATF RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|89144531|emb|CAJ79846.1| Threonyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           LVS]
 gi|134253817|gb|EBA52911.1| threonyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           257]
 gi|156253463|gb|ABU61969.1| threonyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FTNF002-00]
          Length = 634

 Score =  620 bits (1600), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 299/642 (46%), Positives = 424/642 (66%), Gaps = 16/642 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           I + FPDGSI+ F       DVA+SIS SLAK  +A  I+ ++ D  D +     + +IT
Sbjct: 2   INIRFPDGSIREFEAGVNSLDVAKSISPSLAKATMAAYIDDQLKDAKDAINSNCELRLIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +DP  L ++RHSCAH++A AV+ ++P  +V IGP++++GFYYDF  ++     +L  IE
Sbjct: 62  VKDPEGLEILRHSCAHLLAHAVKELYPNTEVTIGPVVDNGFYYDFSFKESIGEADLPTIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           KKM+E+  + +P   + +   +A E F+++ E YKVEI++SI A E + +Y Q  + DLC
Sbjct: 122 KKMKELAKKSAPVSYRVVPKAEAIEFFKAQGENYKVEIIDSI-ADEQMKIYTQDNFSDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ +T  V K FKL K+AGAYWRG+S+  ML+RIYGT W T+++L QYL  LEE+EK
Sbjct: 181 RGPHIPNTS-VLKAFKLTKLAGAYWRGNSDNEMLTRIYGTCWATKEDLEQYLNMLEEAEK 239

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQ 302
           RDHRK+ + +DLFH  ED  G+ FWH  G +I++ +  YMR    K    EI TP + D 
Sbjct: 240 RDHRKIGKVLDLFHFQEDSPGIAFWHDNGVRIWRQVEDYMRASNNKYGCSEIRTPLIADF 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LWQ+SGH   Y  NMFA K  +      R FA++PMNCP  V V+N  L SYR+LP+R+
Sbjct: 300 SLWQKSGHASKYAENMFATKSEN------RDFAIRPMNCPTCVQVYNTKLHSYRDLPIRM 353

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFG V+RNEPSGSLHGL+RVR FTQDD H+FCT EQ+  E + +      +YKDFGF  
Sbjct: 354 AEFGIVHRNEPSGSLHGLLRVRSFTQDDGHIFCTPEQVEEEVILMVQQCFEVYKDFGFND 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             VK++ RPE R+G D  WD +E I+K  LD       + ++  +  GEGAFYGPK E+ 
Sbjct: 414 FAVKIALRPENRIGDDETWDKSEQILKNALDA------NNVSYELFPGEGAFYGPKIEFH 467

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LKDAIGR WQCGTIQ+DF++P R  A Y++ + EK   VM+HRA+ GS+ERFIG++IE++
Sbjct: 468 LKDAIGRSWQCGTIQLDFSMPQRLGATYIDKNGEKQVSVMLHRAIVGSLERFIGMLIEHY 527

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            GNLPLWL+P+Q  V  I+++  +Y +E+  +L+ + +  + D RNE I +KIREH++ +
Sbjct: 528 AGNLPLWLAPVQVAVMGISNNQDDYCKEVFIMLEKNGIRAKLDLRNEKIGFKIREHTLLR 587

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P ++I G  E  ++ I IR+       ++S+ D    L K+
Sbjct: 588 VPYLVILGKNEQEQKIITIRKHSGEDLGQMSVDDFCAFLDKQ 629


>gi|115315107|ref|YP_763830.1| threonine--tRNA ligase [Francisella tularensis subsp. holarctica
           OSU18]
 gi|122324891|sp|Q0BL41|SYT_FRATO RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|115130006|gb|ABI83193.1| threonine--tRNA ligase [Francisella tularensis subsp. holarctica
           OSU18]
          Length = 634

 Score =  620 bits (1600), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 299/642 (46%), Positives = 424/642 (66%), Gaps = 16/642 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           I + FPDGSI+ F       DVA+SIS SLAK  +A  I+ ++ D  D +     + +IT
Sbjct: 2   INIRFPDGSIREFEAGVNSLDVAKSISPSLAKATMAAYIDDQLKDAKDAINSNCELRLIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +DP  L ++RHSCAH++A AV+ ++P  +V IGP++++GFYYDF  ++     +L  IE
Sbjct: 62  VKDPEGLEILRHSCAHLLAHAVKELYPNTEVTIGPVVDNGFYYDFSFKESIGEADLPTIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           KKM+E+  + +P   + +   +A E F+++ E YKVEI++SI A E + +Y Q  + DLC
Sbjct: 122 KKMKELAKKSAPVSYRVVPKTEAIEFFKAQGENYKVEIIDSI-ADEQMKIYTQDNFSDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ +T  V K FKL K+AGAYWRG+S+  ML+RIYGT W T+++L QYL  LEE+EK
Sbjct: 181 RGPHIPNTS-VLKAFKLTKLAGAYWRGNSDNEMLTRIYGTCWATKEDLEQYLNMLEEAEK 239

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQ 302
           RDHRK+ + +DLFH  ED  G+ FWH  G +I++ +  YMR    K    EI TP + D 
Sbjct: 240 RDHRKIGKVLDLFHFQEDSPGIAFWHDNGVRIWRQVEDYMRASNNKYGCSEIRTPLIADF 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LWQ+SGH   Y  NMFA K  +      R FA++PMNCP  V V+N  L SYR+LP+R+
Sbjct: 300 SLWQKSGHASKYAENMFATKSEN------RDFAIRPMNCPTCVQVYNTKLHSYRDLPIRM 353

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFG V+RNEPSGSLHGL+RVR FTQDD H+FCT EQ+  E + +      +YKDFGF  
Sbjct: 354 AEFGIVHRNEPSGSLHGLLRVRSFTQDDGHIFCTPEQVEEEVILMVQQCFEVYKDFGFND 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             VK++ RPE R+G D  WD +E I+K  LD       + ++  +  GEGAFYGPK E+ 
Sbjct: 414 FAVKIALRPENRIGDDETWDKSEQILKNALDA------NNVSYELFPGEGAFYGPKIEFH 467

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LKDAIGR WQCGTIQ+DF++P R  A Y++ + EK   VM+HRA+ GS+ERFIG++IE++
Sbjct: 468 LKDAIGRSWQCGTIQLDFSMPQRLGATYIDKNGEKQVSVMLHRAIVGSLERFIGMLIEHY 527

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            GNLPLWL+P+Q  V  I+++  +Y +E+  +L+ + +  + D RNE I +KIREH++ +
Sbjct: 528 AGNLPLWLAPVQVAVMGISNNQDDYCKEVFIMLEKNGIRAKLDLRNEKIGFKIREHTLLR 587

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P ++I G  E  ++ I IR+       ++S+ D    L K+
Sbjct: 588 VPYLVILGKNEQEQKIITIRKHSGEDLGQMSVDDFCAFLDKQ 629


>gi|114047517|ref|YP_738067.1| threonyl-tRNA synthetase [Shewanella sp. MR-7]
 gi|123326545|sp|Q0HV45|SYT_SHESR RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|113888959|gb|ABI43010.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Shewanella sp.
           MR-7]
          Length = 642

 Score =  620 bits (1599), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 287/633 (45%), Positives = 413/633 (65%), Gaps = 16/633 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  DVA  I   LAK  +A  +NG++ D  D +  +  + IIT +
Sbjct: 4   ITLPDGSKREFAHPVSTLDVAADIGPGLAKACIAGRVNGELKDACDLIETDAELSIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   + ++RHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D E   + +++  +EK+
Sbjct: 64  DEEGIEILRHSCAHLLGHAIKQLWPQTKMAIGPVIDNGFYYDIDLEHKLTQEDIEALEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K+ +S ++AR+ F ++ E YK+ IL E+I       LY   E+ D+CR
Sbjct: 124 MLELAKTNYDVVKRVVSWQEARDTFAARGEEYKIAILDENISKDATPALYHHEEYTDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKLM +AGAYWRG+S   ML RIYGTAW  ++ L+ +L  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLMSIAGAYWRGNSENKMLQRIYGTAWADKKALSTHLARLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF  L  ++RRK+    Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWSIFLELERFIRRKLNQYTYQEVKGPLMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWERSGHWDKYSEAMFT------TSSENREYAVKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFG  +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+  E      ++   Y  FGFE I
Sbjct: 357 EFGCCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQVQAEVSSCIQMVYDTYSTFGFENI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+G DA+WD AE  +K  L   KN     I   +L GEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEKRIGDDAMWDRAEEALKQALRA-KN-----IEFTILPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+D+ LPSR  A YV   + +  PVMIHRA+ GS+ERF+GI+IE + 
Sbjct: 471 HDCLDRAWQCGTVQLDYALPSRLGATYVAEDNSRQTPVMIHRAILGSLERFLGILIEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+Q +V  IT    +Y +E+    K   +    D RNE I +KIREH+++++
Sbjct: 531 GRFPTWLAPMQVVVMNITDKQADYVEEVVKFFKEQGIRASFDLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
           P +++ GD+E   + + +R        K+ + D
Sbjct: 591 PYLLVVGDQEMENKEVAVRTRDGVDLGKMRIED 623


>gi|164685973|ref|ZP_01946163.2| threonyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
 gi|212218739|ref|YP_002305526.1| threonyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
 gi|164601497|gb|EAX33218.2| threonyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
 gi|212013001|gb|ACJ20381.1| threonyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
          Length = 660

 Score =  620 bits (1599), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 294/636 (46%), Positives = 425/636 (66%), Gaps = 18/636 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP+   +  PDGS+K F    +   VAESI  SLAK A+A  I+  + D+S  + ++ S+
Sbjct: 10  MPT---IQLPDGSVKQFSKPVSVQAVAESIGTSLAKAALAGKIDDHLVDVSFIIDKDVSL 66

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +DP  L VIRHS AH++A AV+ ++P+ +V IGP++EDGFYYDF  E+ F+ ++L
Sbjct: 67  RIITEKDPEGLEVIRHSAAHLLAHAVKELFPKAEVTIGPVVEDGFYYDFAFERSFTPEDL 126

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IE+KM+ +   D    ++ LS ++A  LF+   E YKVEI+  IP +E +T Y+QG++
Sbjct: 127 EKIEEKMRSLAKADLAVERRVLSRDEALTLFKKMGERYKVEIIRDIPKEEILTAYQQGDF 186

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV  TG +K F KL K+AGAYW+GDSN  ML RIYGTAW   + L  YLY LE
Sbjct: 187 IDLCRGPHVPRTGMLKAF-KLTKLAGAYWQGDSNNEMLQRIYGTAWADTKALKAYLYRLE 245

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+EKRDHR LA++MDLFH   +  G +FWH  GW I   +  Y+R    K  Y+E++TPQ
Sbjct: 246 EAEKRDHRLLAKKMDLFHFQPESPGNVFWHPNGWSIILQMREYIRHITHKYGYQEVHTPQ 305

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D  LW +SGH + +  ++F++        + + + +KPM+CP HV +FN G+KSYR+L
Sbjct: 306 LIDASLWDKSGHLEKFGDDIFSLPL------EPQQYVIKPMSCPAHVQIFNQGVKSYRDL 359

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R AEFG+ +RNEPSG+LHGLMR+RGF QDDAH+FCT++Q+ +E     + +  +Y DF
Sbjct: 360 PLRYAEFGACHRNEPSGTLHGLMRLRGFVQDDAHIFCTEDQIQSEVSAFIDQLHEVYADF 419

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF +++ KLSTRPEKRVGSD +W  AE  +    +      +  +   +L GEGAFYGPK
Sbjct: 420 GFTEVIHKLSTRPEKRVGSDEVWTKAEQALAEAFN------RKGVEWDILPGEGAFYGPK 473

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ L+D +GR WQCGT+QVDF++P R  A Y+     K  PVMIHRA+ GS ERF+GI+
Sbjct: 474 IEFSLRDCLGRIWQCGTVQVDFSVPERLGAHYIAEDGSKKPPVMIHRAILGSFERFLGIL 533

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           +E   G LPLWL+P+Q +V  IT    +Y  +    L++  +   +D RNE I +KIREH
Sbjct: 534 LEESAGKLPLWLAPVQVVVMNITDRQADYVGQTVENLQNLGIRAHSDLRNEKIGFKIREH 593

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           +I ++P +++ GD+E +++++ +R      +  ++L
Sbjct: 594 TIARVPYLVVIGDREVADKTLSVRALEDEASTTITL 629


>gi|254369559|ref|ZP_04985570.1| threonyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FSC022]
 gi|157122513|gb|EDO66648.1| threonyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FSC022]
          Length = 634

 Score =  620 bits (1598), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 298/642 (46%), Positives = 424/642 (66%), Gaps = 16/642 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           I + FPDGSI+ F       DVA+SIS SLAK  +A  I+ ++ D  D +     + +IT
Sbjct: 2   INIRFPDGSIREFEAGVNSLDVAKSISPSLAKATMAAYIDDQLKDAKDAINSNCELRLIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +DP  L ++RHSCAH++A AV+ ++P  +V IGP++++GFYYDF  ++     +L  IE
Sbjct: 62  VKDPEGLEILRHSCAHLLAHAVKELYPNTEVTIGPVVDNGFYYDFSFKESIGEADLPTIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           KKM+E+  + +P   + +   +A E F+++ E YKVEI++SI A E + +Y Q  + DLC
Sbjct: 122 KKMKELAKKSAPVSYRVVPKAEAIEFFKAQGENYKVEIIDSI-ADEQMKIYTQDNFSDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ +T  V K FKL K+AGAYWRG+S+  ML+RIYGT W T+++L QYL  LEE+EK
Sbjct: 181 RGPHIPNTS-VLKAFKLTKLAGAYWRGNSDNEMLTRIYGTCWATKEDLEQYLNMLEEAEK 239

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQ 302
           RDHRK+ + +DLFH  ED  G+ FWH  G +I++ +  YMR    K    EI TP + D 
Sbjct: 240 RDHRKIGKVLDLFHFQEDSPGIAFWHDNGVRIWRQVEDYMRASNNKYGCSEIRTPLIADF 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LWQ+SGH   Y  NMFA K  +      R FA++PMNCP  V V+N  L SYR+LP+R+
Sbjct: 300 SLWQKSGHASKYAENMFATKSEN------RDFAIRPMNCPTCVQVYNTKLHSYRDLPIRM 353

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFG V+RNEPSGSLHGL+RVR FTQDD H+FCT EQ+  E + +      +YKDFGF  
Sbjct: 354 AEFGIVHRNEPSGSLHGLLRVRSFTQDDGHIFCTPEQVEEEVILMVQQCFEVYKDFGFND 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             VK++ RPE R+G D  WD +E ++K  LD       + ++  +  GEGAFYGPK E+ 
Sbjct: 414 FAVKIALRPENRIGDDETWDKSEQMLKNALDA------NNVSYELFPGEGAFYGPKIEFH 467

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LKDAIGR WQCGTIQ+DF++P R  A Y++ + EK   VM+HRA+ GS+ERFIG++IE++
Sbjct: 468 LKDAIGRSWQCGTIQLDFSMPQRLGATYIDKNGEKQVSVMLHRAIVGSLERFIGMLIEHY 527

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            GNLPLWL+P+Q  V  I+++  +Y +E+  +L+ + +  + D RNE I +KIREH++ +
Sbjct: 528 AGNLPLWLAPVQVAVMGISNNQDDYCKEVFIMLEKNGIRAKLDLRNEKIGFKIREHTLLR 587

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P ++I G  E  ++ I IR+       ++S+ D    L K+
Sbjct: 588 VPYLVILGKNEQEQKIITIRKHSGEDLGQMSVDDFCAFLDKQ 629


>gi|292493207|ref|YP_003528646.1| threonyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
 gi|291581802|gb|ADE16259.1| threonyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
          Length = 644

 Score =  619 bits (1596), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 304/631 (48%), Positives = 415/631 (65%), Gaps = 15/631 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPE 65
           +T PDGS + F    T  DVA  I   LAK A+A  I+G + D S P++E + + +IT  
Sbjct: 4   ITLPDGSQRYFEHSVTVYDVAADIGSGLAKAALAGKIDGHLVDTSYPLKEDTELTVITGR 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           DP  L +IRHSCAH++A+AV++++PE QV IGP+IEDGFYYDF   + FS ++L  IE K
Sbjct: 64  DPEGLEIIRHSCAHLLAQAVKALYPEAQVTIGPVIEDGFYYDFAYPKGFSPEDLEAIEAK 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           MQE++ +D    ++  S E+A  LF    E YK EI+ SIP  E ++LYRQG++ DLCRG
Sbjct: 124 MQELVEQDISVHREVKSREEAISLFRQMGEEYKAEIIASIPQGEEISLYRQGDFVDLCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV ST ++K F KL KV+GAYWRGD+N  ML R+YGTAW  ++ L  YL+ LEE+EKRD
Sbjct: 184 PHVPSTSRLKAF-KLTKVSGAYWRGDANNEMLQRVYGTAWPDKKALKAYLHRLEEAEKRD 242

Query: 246 HRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQH 303
           HR++  E+DLF I  E G G++FWH  G +I Q +  + R R     YE + TP +  Q 
Sbjct: 243 HRRIGTELDLFSIQDEAGGGLVFWHPMGARIRQVIEDFWRERHRAAGYETLYTPHIAHQQ 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LWQ SGH D YR +M+     D  +     + LKPMNCP HV V+   L+SYRELP+R A
Sbjct: 303 LWQTSGHTDFYRESMYQPMEEDHQL-----YQLKPMNCPFHVLVYKGRLRSYRELPLRWA 357

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           E G+VYR+E SG+LHGLMRVRGFTQDDAH+FC +EQ+ +E L I +L + +   FGFE+ 
Sbjct: 358 ELGTVYRHEMSGALHGLMRVRGFTQDDAHIFCREEQIEDEILGILDLTLEMLSAFGFERY 417

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            V LSTRPEK VGSDA+W+ A   ++  L+      +  ++  V  G GAFYGPK +  +
Sbjct: 418 EVDLSTRPEKSVGSDAIWERATQALRSALE------KKGLDYAVDEGGGAFYGPKIDIKI 471

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +DAIGR WQC T+Q+DFNLP RF   YV     +  P+MIHRAV GS+ERF G++IE+++
Sbjct: 472 EDAIGRKWQCSTVQLDFNLPERFEMEYVAEDGARHQPIMIHRAVLGSLERFFGVLIEHYE 531

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+Q  V  IT    EYA ++   LK+       D RNE I +KIREH+++++
Sbjct: 532 GKFPPWLAPVQVAVMNITDRQAEYACQVEETLKNKGFRSLLDLRNEKIGFKIREHTLRRV 591

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           P +++ GD+E   +++ +R   S     +SL
Sbjct: 592 PYLLVIGDREVENQTVAVRTRYSKDLGAMSL 622


>gi|253989346|ref|YP_003040702.1| threonyl-tRNA synthetase [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253780796|emb|CAQ83958.1| threonyl-tRNA synthetase [Photorhabdus asymbiotica]
          Length = 642

 Score =  619 bits (1595), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 284/619 (45%), Positives = 420/619 (67%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS + F    +  DVA  I   LAK  +A  +NG++ D  + +  + ++ IIT +
Sbjct: 4   ITLPDGSQRQFDRAVSVMDVACDIGPGLAKACIAGRVNGELVDTCELIDSDANLAIITSK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D  +  + +++  +EK+
Sbjct: 64  DDAGLEIIRHSCAHLLGHAIKQLWPDTKMAIGPVIDNGFYYDVDLGRALTQEDIELLEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+  +D   +K+ +S ++AR+ F  + E YKV+IL E+I   ++  LY   E+ D+CR
Sbjct: 124 MLELAKKDYDVIKKKVSWQEARDTFVVRGEDYKVQILDENIGRDDHPGLYNHEEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKL KVAGAYWRG+SN  ML RIYGTAW+ +++L  YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLQKVAGAYWRGNSNNKMLQRIYGTAWSDKKQLNTYLQRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G+ FWH  GW IF+ L +++R K+K+  Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMAFWHNDGWTIFRELETFVRTKLKEYQYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           +W+++GHW++Y  +MF       T  + R + +KPMNCPGH+ +FN GLKSYR+LP+R+A
Sbjct: 303 MWERTGHWENYNEHMFT------TSSENREYCVKPMNCPGHIQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT+EQ+  E      ++  +Y  FGFEKI
Sbjct: 357 EFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQIHREVSNCIKMVYDVYSTFGFEKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+G++  W+ AE  +   L       ++ +      GEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEKRIGTEEQWNQAEESLAAAL------QENGVQFEYQPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF+LPSR  A YV  ++E+  PVMIHRAV GS+ERFIGI+ E + 
Sbjct: 471 HDCLDRAWQCGTVQLDFSLPSRLGASYVGENNERKVPVMIHRAVLGSLERFIGILTEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P W++P Q +V  IT    +Y QE+A   +   +  + D RNE I +KIREH+++++
Sbjct: 531 GFFPTWIAPQQVVVMNITDGQADYVQELAKKFQESGIRAKADLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++CG+KE     I +R
Sbjct: 591 PYMLVCGEKEVESGKISVR 609


>gi|262394487|ref|YP_003286341.1| threonyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|262338081|gb|ACY51876.1| threonyl-tRNA synthetase [Vibrio sp. Ex25]
          Length = 642

 Score =  619 bits (1595), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 295/642 (45%), Positives = 425/642 (66%), Gaps = 17/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPE 65
           +T PDGS + F    +  +VA+SI   LAK  +A  +NG   D  D + E  S+EIIT +
Sbjct: 4   ITLPDGSQRQFDNPVSTMEVAQSIGPGLAKATIAGRVNGNRVDACDLIEEDASLEIITVK 63

Query: 66  DP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  A++ ++P+ ++AIGP I++GFYYD D ++  + ++L +IEK
Sbjct: 64  DEVDGLEIVRHSCAHLLGHALKQLYPQAKMAIGPTIDNGFYYDIDLDESLTQEDLEKIEK 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLC 183
           +M+E+       +K+ +S ++AR+ FES+ E YKVEIL E++   +   LY   E+ D+C
Sbjct: 124 RMKELAKTKYEVVKKKVSWQEARDTFESRGEPYKVEILDENVSRDDRPGLYHHEEYIDMC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +     + F L+ VAGAYWRG+S+  ML RIYGTA++ ++ L  +L  LEE+ K
Sbjct: 184 RGPHVPNMS-FCQHFTLLNVAGAYWRGNSDNKMLQRIYGTAFHDKKALKAHLTRLEEAAK 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRK+ +++DLFH+ ++  G++FWH  GW IF+ L  ++R K+ +  Y+E+  P ++D+
Sbjct: 243 RDHRKIGKQLDLFHMQQEAPGMVFWHHNGWSIFRDLEVFIRAKLDEYGYQEVKGPLMMDR 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+
Sbjct: 303 VLWERSGHWDKYADAMFT------TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRM 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHG+MRVRGFTQDDAH+FCT+ Q+  E      ++   Y+ FGF+ 
Sbjct: 357 AEFGSCHRNEPSGALHGIMRVRGFTQDDAHIFCTESQIQEEVTNCIKMVYDTYQTFGFDN 416

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+VKLSTRPEKRVGSD +WD +E  +K  L+++       I   +  GEGAFYGPK E+ 
Sbjct: 417 IVVKLSTRPEKRVGSDEIWDQSEEALKQSLESMD------IPYEIQEGEGAFYGPKIEFT 470

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D + R WQCGT+Q+DFNLP R  A YV  ++E+  PVMIHRA+ GS+ERFIGI+IE +
Sbjct: 471 LYDCLDRAWQCGTVQLDFNLPGRLGATYVGENNERLVPVMIHRAILGSLERFIGILIEEY 530

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P QA++  IT     Y QEI   L+   +  + D RNE I +KIREH++K+
Sbjct: 531 AGFFPTWLAPEQAVLMNITDKQSGYVQEIVQKLQKSGIRAKADLRNEKIGFKIREHTLKR 590

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P +++ GD+E     I +R        K  + D I  +  E
Sbjct: 591 VPYMLVVGDQEMEAGEIAVRTRKGKDLGKFKVDDFIAYIQDE 632


>gi|320539025|ref|ZP_08038700.1| threonyl-tRNA synthetase [Serratia symbiotica str. Tucson]
 gi|320030958|gb|EFW12962.1| threonyl-tRNA synthetase [Serratia symbiotica str. Tucson]
          Length = 642

 Score =  618 bits (1594), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 281/619 (45%), Positives = 420/619 (67%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           ++ PDGS ++F    +  DVA  I   LAK  +A  +NG++ D  D ++ +  + IIT +
Sbjct: 4   ISLPDGSQRHFDYPISPLDVARDIGPGLAKACIAGRVNGELVDACDLIKSDAQLAIITIK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L ++RHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D E+  + ++L  +EK+
Sbjct: 64  DAEGLEIMRHSCAHLLGHAIKQLWPDTKMAIGPVIDNGFYYDVDIERTLTQEDLDLLEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M  +  +D   +K+ +S ++A + F ++ E+YKV IL E+I   +   LY   E+ D+CR
Sbjct: 124 MHALADKDYDVIKKKVSWQEASDTFAARGESYKVAILDENIGHDDRPGLYHHEEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKL K +GAYWRGDS   ML RIYGTAW  +++L  YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLQKTSGAYWRGDSKNKMLQRIYGTAWADKKQLNAYLQRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW +F+ L +++R K+K+  Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWTVFRELEAFVRMKLKEYQYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW++Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+ 
Sbjct: 303 LWEKTGHWENYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMG 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+  E      ++  +Y  FGF+KI
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQVRAEVNACIRMVYDVYATFGFDKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPEKR+G+D +W  AE  +   L      +++ I     LGEGAFYGPK E+ L
Sbjct: 417 AVKLSTRPEKRIGTDDMWTRAEEDLAAAL------TENGIPLEYQLGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF LP R +A YV+  +++  PVMIHRA+ GS+ERFIGI+ E + 
Sbjct: 471 HDCLDRAWQCGTVQLDFFLPGRLSASYVSEDNDRVVPVMIHRAILGSMERFIGILTEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P W++P+Q +V  IT S  +Y Q++   L+   +  + D RNE I +KIREH+++++
Sbjct: 531 GFYPTWIAPVQVVVMNITDSQSDYVQQVTKKLQDAGIRAKADLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++CGDKE    ++ +R
Sbjct: 591 PYMLVCGDKEVEAGNVAVR 609


>gi|37526560|ref|NP_929904.1| threonyl-tRNA synthetase [Photorhabdus luminescens subsp. laumondii
           TTO1]
 gi|73919813|sp|Q7N3P6|SYT_PHOLL RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|36785991|emb|CAE15043.1| threonyl-tRNA synthetase (threonine--tRNA ligase) [Photorhabdus
           luminescens subsp. laumondii TTO1]
          Length = 642

 Score =  618 bits (1594), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 284/619 (45%), Positives = 420/619 (67%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS + F    +  DVA  I   LAK  +A  +NG++ D  + +  + ++ IIT +
Sbjct: 4   VTLPDGSQRQFDHAVSVMDVACDIGPGLAKACIAGRVNGELVDACELIDSDANLAIITSK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ +WP+ ++AIGPII++GFYYD D  +  + +++  +EK+
Sbjct: 64  DDAGLEIIRHSCAHLLGHAIKQLWPDTKMAIGPIIDNGFYYDVDLGRALTQEDIELLEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+  +D   +K+ ++ ++AR+ F ++ E YKV+IL E+I   +   LY   E+ D+CR
Sbjct: 124 MLELAKKDYDVIKKKVNWQEARDTFVARGEDYKVQILDENISRDDRPGLYNHEEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKL KVAGAYWRGDSN  ML RIYGTAW  +++L  YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLQKVAGAYWRGDSNNKMLQRIYGTAWADKKQLNTYLQRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G+ FWH  GW IF+ L +++R K+K+  Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMAFWHNDGWTIFRELETFVRTKLKEYQYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           +W+++GHW++Y  +MF       T  + R + +KPMNCPGH+ +FN GLKSYR+LP+R+A
Sbjct: 303 MWERTGHWENYGEHMFT------TSSENREYCVKPMNCPGHIQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT+EQ+  E      ++  +Y  FGFEKI
Sbjct: 357 EFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQIHREVSSCIKMVYDVYSTFGFEKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+G++  W+ AE  +   L       ++ +      GEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEKRIGTEEQWNQAEESLAAAL------QENGVQFEYQPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF+LP R +A YV  ++E+  PVMIHRAV GS+ERFIGI+ E + 
Sbjct: 471 HDCLDRAWQCGTVQLDFSLPGRLSASYVGENNERKVPVMIHRAVLGSLERFIGILTEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P W++P Q +V  IT S  +Y QE+   L+   +  + D RNE I +KIREH+++++
Sbjct: 531 GFFPTWIAPQQVVVMNITDSQADYVQELVKKLQDAGIRAKADLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++CG+KE     + +R
Sbjct: 591 PYMLVCGEKEVESGKVSVR 609


>gi|114563199|ref|YP_750712.1| threonyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
 gi|122299726|sp|Q082E1|SYT_SHEFN RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|114334492|gb|ABI71874.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Shewanella
           frigidimarina NCIMB 400]
          Length = 642

 Score =  617 bits (1591), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 284/641 (44%), Positives = 416/641 (64%), Gaps = 16/641 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPE 65
           +T PDGS + F    +  DVA  I   LAK  +A  +NG++ D +D +   S + IIT +
Sbjct: 4   ITLPDGSKREFANPVSTLDVALDIGPGLAKACIAGRVNGELKDATDLITADSELAIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   + ++RHSCAH++  A++ +WPE ++AIGP+I++GFYYD D +   + +++  +EK+
Sbjct: 64  DEEGVEILRHSCAHLLGHAIKQMWPETKMAIGPVIDNGFYYDIDLDHKLTHEDIEALEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M  +   +   +K+ +S ++AR+ F+ + E YK+ IL E+I       LY   E+ D+CR
Sbjct: 124 MLALAKTNYDVVKKVVSWQEARDAFDGRGEEYKIAILDENISKDATPALYHHEEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +  + FKLM VAGAYWRG+S+  ML R+YGTAW  ++ L  +L  LEE+ KR
Sbjct: 184 GPHVPNM-RFCQNFKLMSVAGAYWRGNSDNKMLQRVYGTAWADKKALKTHLVRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF  L  ++R+K+    Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWSIFLELEKFIRQKLGQYTYQEVKGPLMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SGHWD Y   MF     +      R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWERSGHWDKYAEAMFTTNSEN------REYAIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFG  +RNEPSGSLHGLMRVRGFTQDDAHVFCT +Q+  E      ++   Y  FGF+ I
Sbjct: 357 EFGCCHRNEPSGSLHGLMRVRGFTQDDAHVFCTDDQVQEEVSACIQMVYDTYATFGFDNI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+G D +WD AE+ +K  L      + + I   +L GEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEKRIGDDDMWDRAEDALKQAL------ANNNIKYEILPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+D+ LP+R  A YV   + +  PVMIHRA+ GS+ERFIGI+IE + 
Sbjct: 471 HDCLDRAWQCGTVQLDYALPTRLGATYVAEDNSRQTPVMIHRAILGSLERFIGILIEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+Q +V  IT    +Y +EI    K   +    D RNE I +KIREH+++++
Sbjct: 531 GKFPTWLAPMQVVVMNITDKQADYVEEIVKFFKEQGIRASFDLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P +++ GD+E   + + +R        K+ L D   ++ ++
Sbjct: 591 PYLLVVGDQEMENKEVAVRTRDGIDLGKLKLEDFAAMIRQQ 631


>gi|170726837|ref|YP_001760863.1| threonyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
 gi|238688661|sp|B1KG61|SYT_SHEWM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|169812184|gb|ACA86768.1| threonyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
          Length = 642

 Score =  617 bits (1591), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 284/631 (45%), Positives = 414/631 (65%), Gaps = 16/631 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPE 65
           +T PDGS + F    +  DVA  I   LAK  +A  +NG++ D  D +   S + IIT +
Sbjct: 4   ITLPDGSKREFATPVSTLDVAADIGPGLAKACIAGRVNGELKDACDIIDTDSELSIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   + ++RHSCAH++  A + +WPE ++AIGP+I++GFYYD D +   + +++  +EK+
Sbjct: 64  DEEGVEILRHSCAHLLGHAFKQLWPEAKMAIGPVIDNGFYYDIDLDHKLTQEDIDALEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M ++   +    K+  S + AR+ FE++ E YK+EIL E+I   +   LY   E+ D+CR
Sbjct: 124 MVQLAKTNYIVEKRVGSWQVARDTFEARGETYKMEILDENISKDDQPALYHHEEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +  + FKLM VAGAYWRG+S+  ML R+YGTAW  ++ L  +L  LEE+ KR
Sbjct: 184 GPHVPNM-KFCQHFKLMSVAGAYWRGNSDNKMLQRVYGTAWADKKALKVHLNRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW +F  L  ++R+K+    Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWSLFLELEKFIRQKLGQYTYQEVKGPLMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SGHWD Y   MF     +      R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWERSGHWDKYSEAMFTTNSEN------REYAIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFG  +RNEPSGSLHGLMRVRGFTQDDAHVFCT++Q+  E      ++   Y+ FGF+ I
Sbjct: 357 EFGCCHRNEPSGSLHGLMRVRGFTQDDAHVFCTEDQVQQEVSACIKMVYDTYETFGFKDI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+G D +WD AE  +K  L      + + I   +L GEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEKRIGDDDMWDRAEEALKQAL------TANDIAYEILPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+D+ LP R  A YV   + +  PVMIHRA+ GS+ERF+GI+IE + 
Sbjct: 471 HDCLDRAWQCGTVQLDYALPGRLGATYVAEDNSRQTPVMIHRAILGSLERFLGILIEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+QA+V  IT    +Y  E+ N+LK + +    D RNE I +KIREH+++++
Sbjct: 531 GKFPTWLAPMQAVVMNITDKQSDYVDEVVNILKENGIRASKDLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           P +++ GD+E   + + +R        K+ +
Sbjct: 591 PYLLVVGDQEMENKEVAVRTRDGVDLGKIQI 621


>gi|284919690|emb|CAX65467.1| hypothetical protein [Enterobacter hormaechei]
          Length = 662

 Score =  616 bits (1589), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 299/620 (48%), Positives = 413/620 (66%), Gaps = 14/620 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           +  T PDGS+K+    AT  +VAESI  S++K AV   I+GK  DL +  +  G + IIT
Sbjct: 24  LTFTLPDGSLKHVRKGATLQNVAESIGSSVSKSAVYAEIDGKCVDLLEKAKNSGKLNIIT 83

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
             D  +L  IR  C  ++A +V+ ++P  ++  G + ++GFYYDF  ++PF+ D+L  IE
Sbjct: 84  VFDEEALGPIRRGCLLLLAASVKQLFPSARMVEGQLTKEGFYYDFAVDKPFTRDDLGMIE 143

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           + M  +IA + P +K+ ++  +A + FE + E +K   L  I A ++VTL    ++ D  
Sbjct: 144 QHMTSLIAENPPIIKEQVTRAQAIDCFEQRGEKFKSTELMEILADKSVTLCHLRQFTDGF 203

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GP V     +K   KL+ V+GAYWRG++N   L RIYGTAW ++++L  +L    E+EK
Sbjct: 204 NGPLVPDLRFLKNM-KLLNVSGAYWRGEANNVQLQRIYGTAWASKKQLDGWLEKTAEAEK 262

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQ 302
           RDHRKL RE+DLFH  ++  G +FWH +GW IFQ+LI+YMR R     Y E+NTP V+D+
Sbjct: 263 RDHRKLGRELDLFHFQDNAPGAVFWHPRGWTIFQSLIAYMRSRHEVAGYVEVNTPDVMDR 322

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHWD+YR +MF  +  D      R FALKPMNCPG V++F +G+KSYR+LPVRL
Sbjct: 323 SLWEISGHWDNYRDHMFTTQTEDG-----RNFALKPMNCPGAVSLFKYGIKSYRDLPVRL 377

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           +EFG V+R EPSGSLHGL+RVR FTQDDAH+FCT +Q+  EC  I  L++ IYK FGFE+
Sbjct: 378 SEFGKVHRYEPSGSLHGLLRVRHFTQDDAHIFCTLQQVEGECKSILQLVLDIYKQFGFEE 437

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + +KLSTRPEKR+GSDA WD  EN +   L+      Q  +N G    EGAFYGPK E++
Sbjct: 438 VAIKLSTRPEKRMGSDADWDRLENALSASLEA--QGLQWSVNPG----EGAFYGPKLEFV 491

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+DAIGRDWQCGT+QVD NLP RF+  Y+        PVM+HRA+FGS+ERF GI++E++
Sbjct: 492 LRDAIGRDWQCGTLQVDMNLPERFDIGYIAEDGSTKRPVMLHRALFGSLERFTGILLEHY 551

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G LP WLSP+QA+V TIT     YA+++   L+   L  E D RNE I +KIRE ++ +
Sbjct: 552 VGKLPAWLSPVQAVVMTITDKQHHYAEQVLKALRKKGLRCEADLRNEKIGFKIREQTLAR 611

Query: 603 IPIIIICGDKEASERSIGIR 622
           IP ++I GD E +   + +R
Sbjct: 612 IPFLLIVGDAEENAARVTVR 631


>gi|204636657|gb|ACI01751.1| putative threonyl-tRNA synthetase [Escherichia coli]
          Length = 652

 Score =  616 bits (1588), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 299/620 (48%), Positives = 413/620 (66%), Gaps = 14/620 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           +  T PDGS+K+    AT  +VAESI  S++K AV   I+GK  DL +  +  G + IIT
Sbjct: 14  LTFTLPDGSLKHVRKGATLQNVAESIGSSVSKSAVYAEIDGKCVDLLEKAKNSGKLNIIT 73

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
             D  +L  IR  C  ++A +V+ ++P  ++  G + ++GFYYDF  ++PF+ D+L  IE
Sbjct: 74  VFDEEALGPIRRGCLLLLAASVKQLFPSARMVEGQLTKEGFYYDFAVDKPFTRDDLGMIE 133

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           + M  +IA + P +K+ ++  +A + FE + E +K   L  I A ++VTL    ++ D  
Sbjct: 134 QHMTSLIAENPPIIKEQVTRAQAIDCFEQRGEKFKSTELMEILADKSVTLCHLRQFTDGF 193

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GP V     +K   KL+ V+GAYWRG++N   L RIYGTAW ++++L  +L    E+EK
Sbjct: 194 NGPLVPDLRFLKNM-KLLNVSGAYWRGEANNVQLQRIYGTAWASKKQLDGWLEKTAEAEK 252

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQ 302
           RDHRKL RE+DLFH  ++  G +FWH +GW IFQ+LI+YMR R     Y E+NTP V+D+
Sbjct: 253 RDHRKLGRELDLFHFQDNAPGAVFWHPRGWTIFQSLIAYMRSRHEVAGYVEVNTPDVMDR 312

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHWD+YR +MF  +  D      R FALKPMNCPG V++F +G+KSYR+LPVRL
Sbjct: 313 SLWEISGHWDNYRDHMFTTQTEDG-----RNFALKPMNCPGAVSLFKYGIKSYRDLPVRL 367

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           +EFG V+R EPSGSLHGL+RVR FTQDDAH+FCT +Q+  EC  I  L++ IYK FGFE+
Sbjct: 368 SEFGKVHRYEPSGSLHGLLRVRHFTQDDAHIFCTLQQVEGECKSILQLVLDIYKQFGFEE 427

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + +KLSTRPEKR+GSDA WD  EN +   L+      Q  +N G    EGAFYGPK E++
Sbjct: 428 VAIKLSTRPEKRMGSDADWDRLENALSASLEA--QGLQWSVNPG----EGAFYGPKLEFV 481

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+DAIGRDWQCGT+QVD NLP RF+  Y+        PVM+HRA+FGS+ERF GI++E++
Sbjct: 482 LRDAIGRDWQCGTLQVDMNLPERFDIGYIAEDGSTKRPVMLHRALFGSLERFTGILLEHY 541

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G LP WLSP+QA+V TIT     YA+++   L+   L  E D RNE I +KIRE ++ +
Sbjct: 542 VGKLPAWLSPVQAVVMTITDKQHHYAEQVLKALRKKGLRCEADLRNEKIGFKIREQTLAR 601

Query: 603 IPIIIICGDKEASERSIGIR 622
           IP ++I GD E +   + +R
Sbjct: 602 IPYLLIVGDAEENAARVTVR 621


>gi|296133381|ref|YP_003640628.1| threonyl-tRNA synthetase [Thermincola sp. JR]
 gi|296031959|gb|ADG82727.1| threonyl-tRNA synthetase [Thermincola potens JR]
          Length = 637

 Score =  616 bits (1588), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 306/644 (47%), Positives = 431/644 (66%), Gaps = 16/644 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEI 61
           + IK++  DGSI+ +    T +D+A  IS  LAK A+   +NGK+ D+S PV E S +EI
Sbjct: 2   AKIKISLKDGSIREYEAGTTITDIAGDISPRLAKNALVARLNGKLVDMSRPVNEDSTLEI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +T +D     V RHS +H++A+AV+ ++PE ++ IGP I DG+YYDFD ++ F+ ++L +
Sbjct: 62  LTFDDEEGREVFRHSSSHVLAQAVKHLFPETKLGIGPAIADGYYYDFDVKENFTPEDLEK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK+M++I+ +D PF +  LS E+A +LF    E YKVE++  +P    ++ Y+QG++ D
Sbjct: 122 IEKEMEKIVQQDLPFERSELSREEALKLFNEMGEPYKVELINDLPEDAVISCYKQGDFVD 181

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LC GPHV STG++K   KLM +AGAYWRG     ML RIYGT++  +  L +YL+ LEE+
Sbjct: 182 LCAGPHVPSTGKLKAI-KLMSLAGAYWRGSEKNKMLQRIYGTSFPKKSLLDEYLFRLEEA 240

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVL 300
           +KRDHRKL  E+DLF I E+G G  F+H KG  +   L  + R +  K  Y+EI TP +L
Sbjct: 241 KKRDHRKLGAELDLFSIQEEGPGFPFFHPKGMIVRNELEKFWREQHEKAGYQEIRTPIIL 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ LW+QSGHWD YR NM+  K  D        FA+KPMNCPG + V+   L SYR+ P+
Sbjct: 301 NRSLWEQSGHWDHYRENMYFTKIDD------IDFAVKPMNCPGSILVYKTRLHSYRDFPI 354

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLAE G V+R+E SG LHGLMRVR FTQDDAH+F    Q+ +E +K+ +LI + YK FGF
Sbjct: 355 RLAELGLVHRHEMSGVLHGLMRVRCFTQDDAHIFMLPSQIKDEIIKVIDLIDNFYKVFGF 414

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
            K  V+LST+PEK +GSD +WD A N +K  L         +IN G    +GAFYGPK +
Sbjct: 415 -KYHVELSTKPEKAMGSDEIWDLATNALKEALAA--KGMDFKINEG----DGAFYGPKID 467

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           + L D +GR WQCGTIQ+DF +P +F+  YV    +K  PVMIHR VFGSIERFIGI+IE
Sbjct: 468 FHLMDCLGRTWQCGTIQLDFLMPEKFDLTYVGEDGQKHRPVMIHRVVFGSIERFIGILIE 527

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +F G LP+WLSP+QA + T+T  + +YA+++A+ LK   + +E D RNE I YKIRE  +
Sbjct: 528 HFAGALPVWLSPVQAKIMTVTDRSKQYAEKVADWLKEKGVRVEVDARNEKIGYKIREAQV 587

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +K+P +++ GDKE    ++ +R+ G      V+  D + ++TKE
Sbjct: 588 EKVPYMLVVGDKEMENGTVAVRKRGEGDKGAVNADDFVALITKE 631


>gi|91793061|ref|YP_562712.1| threonyl-tRNA synthetase [Shewanella denitrificans OS217]
 gi|123060978|sp|Q12NI7|SYT_SHEDO RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|91715063|gb|ABE54989.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Shewanella
           denitrificans OS217]
          Length = 642

 Score =  615 bits (1587), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 285/633 (45%), Positives = 412/633 (65%), Gaps = 16/633 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPE 65
           +T PDGS + F    +  DVA  I   LAK  +A  +NG++ D  D +   S + IIT +
Sbjct: 4   ITLPDGSKREFVNPVSTLDVAADIGPGLAKACIAGRVNGELKDACDLISTDSDLSIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   + ++RHSCAH++  AV+ +WPE ++AIGP+I++GFYYD D +   +++++  +EK+
Sbjct: 64  DQEGVEILRHSCAHLLGHAVKQMWPEAKMAIGPVIDNGFYYDIDLDHKLTAEDIEALEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M ++   +   +K+ +S  +AR+ F  + E YK+ IL E+I       LY   E+ D+CR
Sbjct: 124 MMDLAKTNYDVVKRVVSWHEARDAFSERGEVYKIAILDENISKDATPALYHHEEYTDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +  + FKLM VAGAYWRG+S+  ML R+YGTAW  ++ L  +L  LEE+ KR
Sbjct: 184 GPHVPNM-RFCQNFKLMSVAGAYWRGNSDNKMLQRVYGTAWADKKALKTHLTRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW +F  L  ++R+K+    Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWSLFLELEKFIRQKLGQYTYQEVKGPLMMDRA 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SGHWD Y   MF     +      R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWERSGHWDKYSDAMFTTNSEN------REYAIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFG  +RNEPSGSLHGLMRVRGFTQDDAH+FCT +Q+  E      ++   Y  FGFE I
Sbjct: 357 EFGCCHRNEPSGSLHGLMRVRGFTQDDAHIFCTDDQVQKEVSDCIQMVYDTYATFGFENI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+G D +WD AE  +K  L  I N     I   +L GEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEKRIGDDDMWDRAEEALKQAL--IANE----IEFEILPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+D+ LPSR  A YV   + +  PVMIHRA+ GS+ERF+GI+IE + 
Sbjct: 471 HDCLDRAWQCGTVQLDYALPSRLGATYVAEDNTRQTPVMIHRAILGSLERFLGILIEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+Q +V  IT    +Y Q++  + K   +    D RNE I +KIREH+++++
Sbjct: 531 GKFPTWLAPMQVVVMNITDKQADYVQDVVKIFKEQGIRASFDLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
           P +++ GD+E   + + +R        K+S+ D
Sbjct: 591 PYLLVVGDQEMENKEVAVRTRDGIDLGKMSIED 623


>gi|91070150|gb|ABE11072.1| threonyl-tRNA synthetase [uncultured Prochlorococcus marinus clone
           HF10-11A3]
          Length = 638

 Score =  615 bits (1587), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 294/618 (47%), Positives = 424/618 (68%), Gaps = 15/618 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPE 65
           +T PDGS K F    T  ++A+SI   LAK  +A  +N  + D + P+ + S + IIT +
Sbjct: 4   ITLPDGSKKVFEKSVTILEIAQSIGSGLAKATIAGRVNDVLLDATIPINKDSKVVIITSK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   + +IRHS AH++  AV+ I+ ++++AIGP+IEDGFYYD   E  F+ ++L +IE +
Sbjct: 64  DKEGIEIIRHSFAHLIGHAVKQIYSDIKMAIGPVIEDGFYYDIFSEYRFTPEDLIKIENR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           + ++I  +       +S E+A + F+ + E +K+ I+E IP +  + LY+  E+ D+CRG
Sbjct: 124 INKLIKTNYDVEILQVSKEEAIKTFKERDETFKLRIIEEIPEQGLINLYKHEEYIDMCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +T  ++ F KL+K++G+YWRG+S    L RIYGTAW  ++EL  YL  +EE+EKRD
Sbjct: 184 PHVPNTRHLRHF-KLLKLSGSYWRGNSENESLQRIYGTAWAKEKELKDYLTRIEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHL 304
           HRKL ++  LFHI E+  G+IFWH  GW I+Q L  Y+R  +K +DY EI TPQ +D+ L
Sbjct: 243 HRKLGKKHSLFHIQEESPGMIFWHPNGWTIYQVLEKYIRGILKKNDYLEIKTPQAVDKSL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHW+ +R +MF       T  + RT+A+KPMNCP H+ VFN GLKSY++LP+RLAE
Sbjct: 303 WEKSGHWEKFRDDMFT------TASENRTYAIKPMNCPCHIQVFNQGLKSYKDLPIRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNEPSG+LHGLMRVR FTQDDAH+FCT+EQ+  E     +L+  +YK FGF++I+
Sbjct: 357 FGSCHRNEPSGALHGLMRVRNFTQDDAHIFCTEEQIQEEVSTFIDLVFEVYKTFGFDEII 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +KLSTRP+KRVGS+ +WD +E  +   LD  KN     +   +  GEGAFYGPK E+ LK
Sbjct: 417 IKLSTRPQKRVGSEEIWDKSEEALSKALDN-KN-----LKWELQPGEGAFYGPKIEFSLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D + R WQCGTIQVDF++P R +A YV+ ++EK +PVM+HRA+ GS ERFIGI+IE ++ 
Sbjct: 471 DCLNRVWQCGTIQVDFSMPIRLDATYVDINNEKRNPVMLHRAILGSFERFIGILIEQYEA 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P+W++P Q I+ +IT   ++   +   LL ++    + D RNE I YKIRE ++K++P
Sbjct: 531 KFPIWIAPYQIILLSITDRNIDKCLKFNELLNNNGYRSKVDIRNEKIGYKIREATLKRVP 590

Query: 605 IIIICGDKEASERSIGIR 622
           +I + GDKE    SI +R
Sbjct: 591 LIAVIGDKEEEIDSIALR 608


>gi|78778982|ref|YP_397094.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Prochlorococcus
           marinus str. MIT 9312]
 gi|123755107|sp|Q31BT7|SYT_PROM9 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|78712481|gb|ABB49658.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Prochlorococcus
           marinus str. MIT 9312]
          Length = 638

 Score =  615 bits (1585), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 296/624 (47%), Positives = 421/624 (67%), Gaps = 15/624 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPE 65
           +T PDGS K F    T  ++A+SI   LAK  +A  +N  + D + P++  S + IIT +
Sbjct: 4   ITLPDGSKKVFEKSVTILEIAQSIGAGLAKATIAGKVNDVLIDATLPIKNDSKVVIITSK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   + +IRHS AH++  AV+ I+ ++++AIGP+IEDGFYYD   EQ F+ ++L +IE +
Sbjct: 64  DKEGIEIIRHSFAHLIGHAVKQIYSDIKMAIGPVIEDGFYYDIFSEQRFTPEDLIKIENR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           + ++I  +       +S E+A + F+ + E +K+ I+E IP +  + LY+  E+ D+CRG
Sbjct: 124 INKLIKTNYDVEILQVSKEEAIKTFKERDETFKLRIIEEIPEEGLINLYKHEEYIDMCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +T  ++ F KL+K++G+YWRG+S    L RIYGTAW  ++EL  YL  +EE+EKRD
Sbjct: 184 PHVPNTRHLRHF-KLLKLSGSYWRGNSENEALQRIYGTAWAKEKELKDYLTRIEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHL 304
           HRKL ++  LFHI E+  G+IFWH  GW I+Q L  Y+R  +K +DY EI TPQ +D+ L
Sbjct: 243 HRKLGKKHSLFHIQEESPGMIFWHPNGWTIYQVLEKYIREILKKNDYLEIKTPQAVDKSL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHW+ +R +MF       T  + RT+A+KPMNCP H+ +FN GLKSY++LP+RLAE
Sbjct: 303 WEKSGHWEKFRDDMFT------TASENRTYAIKPMNCPCHIQLFNQGLKSYKDLPIRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNEPSG+LHGLMRVR FTQDDAH+FC +EQ+  E     +L+  +YK FGF++I+
Sbjct: 357 FGSCHRNEPSGALHGLMRVRNFTQDDAHIFCKEEQIQEEVSTFIDLVFEVYKTFGFDEII 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +KLSTRPEKRVGS+ +WD +E  +   LD  KN     +   +  GEGAFYGPK E+ LK
Sbjct: 417 IKLSTRPEKRVGSEEIWDKSEEALTKALDN-KN-----LKWELQPGEGAFYGPKIEFSLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D + R WQCGTIQVDF++P R  A YV+  +EK +PVM+HRA+ GS ERFIGI+IE ++ 
Sbjct: 471 DCLNRVWQCGTIQVDFSMPIRLEATYVDIDNEKRNPVMLHRAILGSFERFIGILIEQYEA 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P+WL+P Q I+ +IT    E   +   L+ ++    + D RNE I YKIRE +I +IP
Sbjct: 531 KFPIWLAPYQIILLSITDRNNEKCLKFNELINNNGYRSKVDIRNEKIGYKIREATISRIP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTT 628
           +I + GDKE    S+ +R    T 
Sbjct: 591 LIAVIGDKEEEIDSVALRALDGTN 614


>gi|157145208|ref|YP_001452527.1| hypothetical protein CKO_00941 [Citrobacter koseri ATCC BAA-895]
 gi|157082413|gb|ABV12091.1| hypothetical protein CKO_00941 [Citrobacter koseri ATCC BAA-895]
          Length = 652

 Score =  615 bits (1585), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 299/620 (48%), Positives = 412/620 (66%), Gaps = 14/620 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           +  T PDGS+K+    AT  +VAESI  S+AK AV   I+GK  DL +  +  G + IIT
Sbjct: 14  LTFTLPDGSLKHVRKGATLQNVAESIGSSVAKSAVYAEIDGKCVDLLEKAKNSGKLNIIT 73

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
             D  +L  IR  C  ++A +V+ ++P  ++  G + ++GFYYDF  ++PF+ D+L  IE
Sbjct: 74  VFDEEALGPIRRGCLLLLAASVKQLFPSARMVEGQLTKEGFYYDFAVDKPFTRDDLGMIE 133

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           + M  +IA + P +K+ ++  +A + FE + E +K   L  I A ++VTL    ++ D  
Sbjct: 134 QHMTSLIAENPPIIKEQVTRAQAIDCFEQRGEKFKSTELMEILADKSVTLCHLRQFTDGF 193

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GP V     +K   KL+ V+GAYWRG++N   L RIYGTAW ++++L  +L    E+EK
Sbjct: 194 NGPLVPDLRFLKNM-KLLNVSGAYWRGEANNVQLQRIYGTAWASKKQLDGWLEKTAEAEK 252

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQ 302
           RDHRKL RE+DLFH  ++  G +FWH +GW IFQ+LI+YMR R     Y E+NTP V+D+
Sbjct: 253 RDHRKLGRELDLFHFQDNAPGAVFWHPRGWTIFQSLIAYMRSRHEVAGYVEVNTPDVMDR 312

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHWD+YR +MF  +  D      R FALKPMNCPG V++F +G+KSYR+LPVRL
Sbjct: 313 SLWEISGHWDNYRDHMFTTQTEDG-----RNFALKPMNCPGAVSLFKYGIKSYRDLPVRL 367

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           +EFG V+R EPSGSLHGL+RVR FTQDDAH+FCT +Q+  EC  I  L++ IYK FGFE+
Sbjct: 368 SEFGKVHRYEPSGSLHGLLRVRHFTQDDAHIFCTLQQVEGECKSILQLVLDIYKQFGFEE 427

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + +KLSTRPEKR+GSDA WD  EN +   L+      Q  +N G    EGAFYGPK E++
Sbjct: 428 VAIKLSTRPEKRMGSDADWDRLENALSASLEA--QGLQWSVNPG----EGAFYGPKLEFV 481

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+DAIGRDWQCGT+QVD NLP RF+  Y+        PVM+HRA+FGS+ERF GI++E++
Sbjct: 482 LRDAIGRDWQCGTLQVDMNLPERFDIGYIAEDGSTKRPVMLHRALFGSLERFTGILLEHY 541

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G LP WLSP+QA+V TIT     YA+++   L+   L  E D RNE I + IRE ++ +
Sbjct: 542 VGKLPAWLSPVQAVVMTITDKQHHYAEQVLKALRKKGLRCEADLRNEKIGFIIREQTLAR 601

Query: 603 IPIIIICGDKEASERSIGIR 622
           IP ++I GD E +   + +R
Sbjct: 602 IPFLLIVGDAEENAARVTVR 621


>gi|294141074|ref|YP_003557052.1| threonyl-tRNA synthetase [Shewanella violacea DSS12]
 gi|293327543|dbj|BAJ02274.1| threonyl-tRNA synthetase [Shewanella violacea DSS12]
          Length = 642

 Score =  615 bits (1585), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 281/619 (45%), Positives = 411/619 (66%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPE 65
           +T PDGS + F    +  DVA  I   LAK  +A  +NG++ D  D +   S + IIT +
Sbjct: 4   ITLPDGSKREFANPVSTLDVAADIGPGLAKACIAGRVNGELKDACDIIDTDSELSIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   + ++RHSCAH++  A + +WPE ++AIGP+I++GFYYD D E   + +++  ++K+
Sbjct: 64  DEEGVQILRHSCAHLLGHAFKQLWPEAKMAIGPVIDNGFYYDIDLEHKLTQEDIDALQKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M ++   +    K+  S + AR+ FE++ E YK+ IL E+I   +   LY   E+ D+C 
Sbjct: 124 MTQLAKTNYKVEKKVGSWQVARDTFEARGETYKMAILDENISQDDQPALYHHEEYVDMCG 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +  + FKLM VAGAYWRG+S+  ML R+YGTAW  ++ L  +L  LEE+ KR
Sbjct: 184 GPHVPNM-RFCQNFKLMSVAGAYWRGNSDNKMLQRVYGTAWADKKALKVHLNRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW++F  L +++R+K+    Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWRLFLELETFIRQKLGQYTYQEVKGPLMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SGHWD Y   MF  K  +      R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWERSGHWDKYSEAMFTTKSEN------REYAIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFG  +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+  E      ++   Y+ FGF+ I
Sbjct: 357 EFGCCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQVQQEVSACIQMVYDTYETFGFKNI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPE+R+G D +WD AE  +K  L      + + I   +L GEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEQRIGDDEMWDRAEEALKQAL------TANDIEFEILPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+D+ LP R  A YV   + +  PVMIHRA+ GS+ERF+GI+IE + 
Sbjct: 471 HDCLDRAWQCGTVQLDYALPGRLGATYVAEDNSRQTPVMIHRAILGSLERFLGILIEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+Q +V  IT     YA E+ NLLK + +    D RNE I +KIREH+++++
Sbjct: 531 GKFPTWLAPMQVVVMNITDKQSNYADEVVNLLKENGIRASKDLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++ GD+E   + + +R
Sbjct: 591 PYLLVVGDQEMENKEVAVR 609


>gi|323143349|ref|ZP_08078037.1| threonine--tRNA ligase [Succinatimonas hippei YIT 12066]
 gi|322416867|gb|EFY07513.1| threonine--tRNA ligase [Succinatimonas hippei YIT 12066]
          Length = 644

 Score =  615 bits (1585), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 283/643 (44%), Positives = 422/643 (65%), Gaps = 16/643 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           IK+T PDG+IK F    + +DVA SI   LA+  VA  I+G + D  D +  +  +EI+T
Sbjct: 2   IKITLPDGAIKEFDHAVSIADVASSIGPGLARNCVAGRIDGVLHDACDLIEHDAKVEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+D   + +IRHSCAH++  A++ +WPE ++AIGP+I++GFYYD D +   +++++  ++
Sbjct: 62  PKDKDGIEIIRHSCAHLLGHAIKELWPETKMAIGPVIDNGFYYDVDLDHKLTAEDMETLD 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE-SIPAKENVTLYRQGEWFDL 182
            KM E+   D   +K+ +  + A ++F+ + E YK  ILE +I   ++  LY   E+ D+
Sbjct: 122 AKMHELAKTDYKVIKEVVDWDTAYKVFDERNEPYKKLILEENIDKADHPALYHHLEYTDM 181

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV   G  + F KL   AGAYWRG+S   ML RIYGTAW T+ EL  YL   EE+ 
Sbjct: 182 CRGPHVPRMGFCQNF-KLTHFAGAYWRGNSKNKMLQRIYGTAWATKDELKAYLKKREEAA 240

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLD 301
           KRDHR L +++DLFH  ++  G++FWH  GW I++ + ++MR  + K  Y E+ TPQ++D
Sbjct: 241 KRDHRVLGKKLDLFHFQQEAPGMVFWHNDGWTIYRVIENFMREMLHKYHYIEVKTPQIMD 300

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW++SGHWD Y  NMF       T  + R +A+KPMNCPG + +FN   +SYR+LP+R
Sbjct: 301 RVLWERSGHWDKYAENMFT------TSSENRDYAIKPMNCPGAIQIFNSRTRSYRDLPIR 354

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AEFG+ +RNEPSGSLHGL+RVR F QDDAH+FCT++Q+  E      ++   Y +FGF 
Sbjct: 355 MAEFGNCHRNEPSGSLHGLLRVRAFEQDDAHIFCTEDQIMTEVSDCIRMVYDTYSNFGFT 414

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
           K+ VKLSTRPEKR+GSD +WD AE       D ++    + +   +  GEGAFYGPK E+
Sbjct: 415 KVDVKLSTRPEKRIGSDEIWDKAE------ADLVEALKLNNLEYELQPGEGAFYGPKIEF 468

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L D++ R WQCGT+Q+DF+LP+R +A Y+   +++  PVMIHRA+ GSIERF+G++ E 
Sbjct: 469 TLHDSLDRAWQCGTVQLDFSLPARLDAHYIGEDNQEHTPVMIHRAMLGSIERFLGVLTEE 528

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           F G+ P WL+PIQA+V  IT   V+Y +++A  L    + +++D RN+ + +KIREH++ 
Sbjct: 529 FAGSFPTWLAPIQAVVMNITDGQVDYVKQVAQKLDEAGIRVKSDLRNDKVGFKIREHTLM 588

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            +P +++CGD+EA    + +R         + L D I ++  +
Sbjct: 589 HVPYMLVCGDREAESGMVAVRTRKGQDLGAMKLDDLIKMIKSD 631


>gi|167623946|ref|YP_001674240.1| threonyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
 gi|189083622|sp|B0TT20|SYT_SHEHH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|167353968|gb|ABZ76581.1| threonyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
          Length = 642

 Score =  614 bits (1584), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 285/631 (45%), Positives = 409/631 (64%), Gaps = 16/631 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPE 65
           +T PDGS + F    +  DVA  I   LAK  +A  +NG++ D  D +   S + IIT +
Sbjct: 4   ITLPDGSKREFANPVSTLDVAADIGPGLAKACIAGRVNGELKDACDIIETDSELSIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   + ++RHSCAH++  A++ ++PE ++AIGP+I++GFYYD D +   + +++  +EK+
Sbjct: 64  DEEGVEILRHSCAHLLGHAIKQLFPETKMAIGPVIDNGFYYDIDLDHKLTQEDIDALEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M  +   +    K+ +S ++AR+ FE++ E YK+ IL E+IP      LY   E+ D+CR
Sbjct: 124 MAALAKTNYAVDKRVVSWQEARDTFEARGEDYKMAILDENIPKDSTPALYHHEEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +  + FKLM VAGAYWRG+S+  ML R+YGTAW  ++ L  +L  LEE+ KR
Sbjct: 184 GPHVPNM-KFCQNFKLMSVAGAYWRGNSDNKMLQRVYGTAWADKKALKVHLNRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW +F  L  ++R+K+    Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWSLFLELEKFIRQKLGQYTYQEVKGPLMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWERSGHWDKYSDAMFT------TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFG  +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+  E      ++   Y  FGF  I
Sbjct: 357 EFGCCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQVQQEVSACIRMVYDTYATFGFSNI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+G D +WD AE  +K  L        + I   +L GEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEKRIGDDDMWDRAEEALKKALKA------NDIEFEILPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+D+ LP R  A YV   + +  PVMIHRA+ GS+ERF+GI+IE + 
Sbjct: 471 HDCLDRAWQCGTVQLDYALPGRLGATYVAEDNSRQTPVMIHRAILGSLERFLGILIEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WLSP+Q +V  IT    +Y   + NL K H +    D RNE I +KIREH+++++
Sbjct: 531 GKFPAWLSPVQVVVMNITDKQSDYVDNVVNLFKEHGIRATKDLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           P +++ GD+E     + +R        K+ L
Sbjct: 591 PYLLVVGDQEMENNEVAVRTREGVDLGKMQL 621


>gi|123968188|ref|YP_001009046.1| threonyl-tRNA synthetase [Prochlorococcus marinus str. AS9601]
 gi|166225480|sp|A2BQ78|SYT_PROMS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|123198298|gb|ABM69939.1| Threonyl-tRNA synthetase [Prochlorococcus marinus str. AS9601]
          Length = 638

 Score =  614 bits (1584), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 293/618 (47%), Positives = 422/618 (68%), Gaps = 15/618 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPE 65
           +T PDGS K F    T  ++A+SI   LAK  +A  +N  + D + P+ + S + IIT +
Sbjct: 4   ITLPDGSKKVFEKSVTILEIAQSIGAGLAKATIAGKVNDVLLDATIPINKDSKVVIITSK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   + +IRHS AH++  AV+ I+ ++++AIGP+IEDGFYYD   E  F+ ++L +IE +
Sbjct: 64  DKEGIEIIRHSFAHLIGHAVKQIYSDIKMAIGPVIEDGFYYDIFSEYRFTPEDLIKIENR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           + ++I  +       +S E+A + F+ + E +K+ I+E IP +  + LY+  E+ D+CRG
Sbjct: 124 INQLIKTNYDVEILQVSKEEAIKTFKERDETFKLRIIEEIPEEGLINLYKHEEYIDMCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +T  ++ F KL+K++G+YWRG+S    L RIYGTAW  ++EL  YL  +EE+EKRD
Sbjct: 184 PHVPNTRHLRHF-KLLKLSGSYWRGNSENESLQRIYGTAWAKEKELKDYLTRIEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHL 304
           HRKL ++  LFHI E+  G+IFWH  GW I+Q L  Y+R  +K +DY EI TPQ +D+ L
Sbjct: 243 HRKLGKKHSLFHIQEESPGMIFWHPNGWTIYQVLEKYIREILKKNDYLEIKTPQAVDKSL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHW+ +R +MF       T  + RT+A+KPMNCP H+ +FN GLKSY++LP+RLAE
Sbjct: 303 WEKSGHWEKFRDDMFT------TASENRTYAIKPMNCPCHIQIFNQGLKSYKDLPIRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNEPSG+LHGLMRVR FTQDDAH+FCT+EQ+  E     +L+  +YK FGF++I+
Sbjct: 357 FGSCHRNEPSGALHGLMRVRNFTQDDAHIFCTEEQIQEEVSTFIDLVFEVYKTFGFDEII 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +KLSTRPEKRVGS+ +WD +E  +   LD  KN   +     +  GEGAFYGPK E+ LK
Sbjct: 417 IKLSTRPEKRVGSEDIWDKSEEALTKALDN-KNLKWE-----LQPGEGAFYGPKIEFSLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D + R WQCGTIQVDF++P R +A YV+  +EK +PVM+HRA+ GS ERFIGI+IE ++ 
Sbjct: 471 DCLNRVWQCGTIQVDFSMPIRLDATYVDIDNEKRNPVMLHRAILGSFERFIGILIEQYEA 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P+WL+P Q I+ +IT   +E   +   L+ ++    + D RNE I YKIRE ++ ++P
Sbjct: 531 KFPIWLAPYQIILLSITDRNIEKCLKFNELINNNGYRSKVDIRNEKIGYKIREATLGRVP 590

Query: 605 IIIICGDKEASERSIGIR 622
           +I + GDKE    S+ +R
Sbjct: 591 LIAVIGDKEEEIDSVALR 608


>gi|126695961|ref|YP_001090847.1| threonyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
 gi|166225476|sp|A3PBX1|SYT_PROM0 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|126543004|gb|ABO17246.1| Threonyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
          Length = 638

 Score =  614 bits (1583), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 294/618 (47%), Positives = 422/618 (68%), Gaps = 15/618 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPE 65
           +T PDGS K F    T  ++A+SI   LAK  +A  +N  + D + P+ + S + IIT +
Sbjct: 4   ITLPDGSKKVFEKSVTILEIAQSIGAGLAKATIAGRVNDVLLDATIPINKDSKVVIITSK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   + +IRHS AH++  AV+ I+ ++++AIGP+IEDGFYYD   E  F+ ++L +IE +
Sbjct: 64  DKEGIEIIRHSFAHLIGHAVKQIYSDIKMAIGPVIEDGFYYDIFSEYRFTPEDLIKIENR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           + ++I  +       +S E+A + F+ + E +K+ I+E IP +  + LY+  E+ D+CRG
Sbjct: 124 INKLIKTNYDVEILQVSKEEAIKTFKERDETFKLRIIEEIPEEGLINLYKHEEYIDMCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +T  ++ F KL+K++G+YWRG+S    L RIYGTAW  ++EL  YL  +EE+EKRD
Sbjct: 184 PHVPNTRHLRHF-KLLKLSGSYWRGNSENESLQRIYGTAWAKEKELKDYLTRIEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHL 304
           HRKL ++  LFHI E+  G+IFWH  GW I+Q L  Y+R  +K +DY EI TPQ +D+ L
Sbjct: 243 HRKLGKKHSLFHIQEESPGMIFWHPNGWTIYQVLEKYIREILKKNDYLEIKTPQAVDKSL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHW+ +R +MF       T  + RT+A+KPMNCP H+ VFN GLKSY++LP+RLAE
Sbjct: 303 WEKSGHWEKFRDDMFT------TASENRTYAIKPMNCPCHIQVFNQGLKSYKDLPIRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNEPSG+LHGLMRVR FTQDDAH+FCT+EQ+  E     +L+  +YK FGF++I+
Sbjct: 357 FGSCHRNEPSGALHGLMRVRNFTQDDAHIFCTEEQIQEEVSTFIDLVFEVYKTFGFDEII 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +KLSTRPEKRVGS+ +WD +E  +   LD  KN     +   +  GEGAFYGPK E+ LK
Sbjct: 417 IKLSTRPEKRVGSEDIWDKSEEALTKALDN-KN-----LKWELQPGEGAFYGPKIEFSLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D + R WQCGTIQVDF++P R +A YV+  +EK +PVM+HRA+ GS ERFIGI+IE ++ 
Sbjct: 471 DCLSRVWQCGTIQVDFSMPIRLDATYVDIDNEKRNPVMLHRAILGSFERFIGILIEQYEA 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P+WL+P Q I+ +IT   +E   +   L+ ++    + D RNE I YKIRE ++ ++P
Sbjct: 531 KFPIWLAPYQIILLSITDRNIEKCLKFNELINNNGYRSKVDIRNEKIGYKIREATLGRVP 590

Query: 605 IIIICGDKEASERSIGIR 622
           +I + GDKE    S+ +R
Sbjct: 591 LIAVIGDKEEEIDSVALR 608


>gi|148555657|ref|YP_001263239.1| threonyl-tRNA synthetase [Sphingomonas wittichii RW1]
 gi|148500847|gb|ABQ69101.1| threonyl-tRNA synthetase [Sphingomonas wittichii RW1]
          Length = 690

 Score =  613 bits (1582), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 299/670 (44%), Positives = 429/670 (64%), Gaps = 23/670 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M   + +T PDGS +      T +++A +I   LAK A+A  ++G++ DL  P+ ++ ++
Sbjct: 23  MSDLLTITLPDGSAREVKTGTTPAEIAAAIGPGLAKAALAARVDGELRDLDRPLEKDSAL 82

Query: 60  EIITPED-PRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF---DKEQPFS 115
            ++T  D   +L + RH  AH++AEAVQS++P  Q+  GP  +DGFYYDF       PF+
Sbjct: 83  ALVTARDEADALDLARHDYAHVLAEAVQSLFPGTQITFGPSTDDGFYYDFAPAPGRGPFT 142

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            +EL  IE +M+ IIA + P  ++  S E+    ++ + E +K E    +P  E +T+Y 
Sbjct: 143 DEELPAIEAEMRRIIAANKPLRREVWSREQLISRWKQQGETFKAEWAAELPGDEPLTVYW 202

Query: 176 QGE-WFDLCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQ 233
            G+ W D+CRGPH+ STG++  + FKL +V+GAYWRGD    MLSRIYGT W  +++L  
Sbjct: 203 SGDDWLDMCRGPHLPSTGKLDPQAFKLTRVSGAYWRGDQKNAMLSRIYGTGWLNKKQLDA 262

Query: 234 YLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYE 292
           +L  LEE+ KRDHR++ +EMDLFH+  +  G +FWH KG+++++ L +YMRRK+    Y 
Sbjct: 263 HLTRLEEAAKRDHRRIGQEMDLFHLQSEAQGSVFWHPKGFRLWRALEAYMRRKLDAAGYV 322

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT-----------FALKPMNC 341
           E+ TPQ++D   W+QSGHW  YR NMF V    D I +               ALKPMNC
Sbjct: 323 EVKTPQLMDARQWEQSGHWGKYRENMFVVP---DEIPNAEEEGPVLSGESELMALKPMNC 379

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
           P HV +F  G+KSYR+LP+R+AEFG  +RNEP G+LHG+MRVR FTQDDAH+F  ++Q+ 
Sbjct: 380 PAHVLIFRQGIKSYRDLPIRMAEFGCCHRNEPHGALHGIMRVRQFTQDDAHIFVREDQLI 439

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E     +L+ ++Y+D GFE+  +KL+ RPEKR GS+ +WD AE  ++  +      + +
Sbjct: 440 AEIKDFCDLLDAVYRDLGFEQYAIKLALRPEKRFGSEEMWDKAEQTLRDAV-AASGRATE 498

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
                 L GEGAFY PK E+ L DAIGR WQ GTIQ D  LP R +A YV    E+  PV
Sbjct: 499 AFGWEELEGEGAFYAPKLEFHLTDAIGRTWQVGTIQADTVLPERLDASYVGEDGERHRPV 558

Query: 522 MIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLS 581
           M+HRA+ G+ ERFIGI+IE+  G  PLWL+P+QA+V TI S A +YA+E+   L +  L 
Sbjct: 559 MLHRAILGTFERFIGILIEHHAGRFPLWLAPVQAVVATIVSDADDYAREVEAKLAAAGLR 618

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           +E+D RNE INYK+REHS+ K+P +++ G +EA E ++ IRR G      + L +AI  L
Sbjct: 619 VESDLRNEKINYKVREHSLAKVPALLVVGKREAEEGTVAIRRLGEQAQTVLPLEEAIAAL 678

Query: 642 TKESLPPDCQ 651
             E+ PPD +
Sbjct: 679 LAEATPPDLR 688


>gi|33861154|ref|NP_892715.1| threonyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris
           str. CCMP1986]
 gi|73919818|sp|Q7V287|SYT_PROMP RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|33639886|emb|CAE19056.1| Threonyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris
           str. CCMP1986]
          Length = 638

 Score =  612 bits (1578), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 293/619 (47%), Positives = 421/619 (68%), Gaps = 15/619 (2%)

Query: 6   KLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITP 64
           ++T PDGS K F    T  ++A+SI   LAK  +A  +N  + D + P+   S + IIT 
Sbjct: 3   EITLPDGSKKVFEKPVTIQEIAQSIGSGLAKATIAGKVNDVLFDATLPIDNDSKVVIITS 62

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
            D   + +IRHS AH++  AV+ ++P +++AIGP+I++GFYYD   E  F+ ++L +IE 
Sbjct: 63  RDKDGIEIIRHSFAHLIGHAVKQLYPNIKMAIGPVIDNGFYYDIFSEYRFTPEDLIKIEN 122

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
           ++  +I ++       ++ ++A + F+ + E +K+ I+E IP +  + LY+  E+ D+CR
Sbjct: 123 RINNLIKKNYDVEILQVTKKEAIKTFQERDETFKLRIIEEIPDEGLINLYKHEEYIDMCR 182

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +T  ++ F KL+K++G+YWRG+S    L RIYGTAW  ++EL  YL  +EE+EKR
Sbjct: 183 GPHVPNTCHLRHF-KLLKLSGSYWRGNSENESLQRIYGTAWAKEKELNDYLKRIEEAEKR 241

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQH 303
           DHRKL ++  LFHI E+  G+IFWH  GW I+Q L  Y+R  + K+DY EI TPQ +D+ 
Sbjct: 242 DHRKLGKKHSLFHIQEESPGMIFWHPNGWTIYQVLEKYVREILNKNDYLEIKTPQAVDKS 301

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SGHWD +R +MF       T  + RT+A+KPMNCP H+ VFN GLKSY++LP+RLA
Sbjct: 302 LWEKSGHWDKFREDMFT------TASENRTYAIKPMNCPCHIQVFNQGLKSYKDLPIRLA 355

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSG+LHGLMRVR FTQDDAH+FCT+EQ+  E     +L+  +YK FGF++I
Sbjct: 356 EFGSCHRNEPSGALHGLMRVRNFTQDDAHIFCTEEQIQAEVSTFIDLVFEVYKTFGFDEI 415

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           ++KLSTRPEKRVGS+ +WD +E  +   LD   N S   +   +  GEGAFYGPK E+ L
Sbjct: 416 IIKLSTRPEKRVGSENIWDKSEEALMKALD---NKSLKWV---LQPGEGAFYGPKIEFSL 469

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           KD + R WQCGTIQVDF++P R +A Y++ ++EK +PVM+HRA+ GS ERFIGI+IE ++
Sbjct: 470 KDCLDRVWQCGTIQVDFSMPIRLDATYIDLNNEKRNPVMLHRAILGSFERFIGILIEQYE 529

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
              P+WL+P Q I+ +IT   +E   +   L+ S     + D RNE I YKIRE +I +I
Sbjct: 530 AKFPIWLAPYQIILLSITDRNIEKCLKFNQLINSKGYRSKVDIRNEKIGYKIREATIGRI 589

Query: 604 PIIIICGDKEASERSIGIR 622
           P+I + GDKE    S+ +R
Sbjct: 590 PLIAVIGDKEEQFDSVALR 608


>gi|300114474|ref|YP_003761049.1| threonyl-tRNA synthetase [Nitrosococcus watsonii C-113]
 gi|299540411|gb|ADJ28728.1| threonyl-tRNA synthetase [Nitrosococcus watsonii C-113]
          Length = 644

 Score =  610 bits (1574), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 295/619 (47%), Positives = 416/619 (67%), Gaps = 15/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS + F    T  DVA  I   LAK A+   I+G++ D + P+ R+  + IIT  
Sbjct: 4   ITLPDGSQRGFDHPVTVYDVAADIGPGLAKAALGGKIDGRLVDSAYPLERDTKLTIITER 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++A+AV++++PE QV IGP+IEDGFYYDF   + F+ ++L  IE K
Sbjct: 64  DTDGLEIIRHSCAHLLAQAVKALYPEAQVTIGPVIEDGFYYDFAYPEGFTPEDLEAIEAK 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+E++ +D    ++  S E+A  LF    E YK EI+ SIP++E ++LYRQG++ DLCRG
Sbjct: 124 MRELVEQDIAVHRELKSREEAISLFRRMGEEYKAEIIASIPSEEEISLYRQGDFVDLCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV ST ++K F KL KVAGAYWRGD+N  ML RIYGTAW  ++ L  YL+ LEE+EKRD
Sbjct: 184 PHVPSTAKLKAF-KLTKVAGAYWRGDANNEMLQRIYGTAWPDKKALEAYLHRLEEAEKRD 242

Query: 246 HRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQVLDQH 303
           HR++  ++DLF I E+ G G++FWH  G +I + +  +   R     YE + TP +  + 
Sbjct: 243 HRRIGSDLDLFSIQEEAGGGLVFWHPMGARIRRVIEDFWQERHTAASYETLYTPHIAHEE 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LWQ SGH D YR +M+  +  +D   D + + LKPMNCP HV V+   L+SYRELP+R A
Sbjct: 303 LWQTSGHTDFYRESMY--QPMED---DHQLYQLKPMNCPFHVLVYQGRLRSYRELPIRWA 357

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           E G+VYR+E SG+LHGLMRVRGFTQDDAH+FC +EQ+ NE L I +L + +   FGF++ 
Sbjct: 358 ELGTVYRHEMSGALHGLMRVRGFTQDDAHIFCREEQIENEILGILDLTLEMLAAFGFDRY 417

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            + LSTRPEK VG +A+WD A   ++  LD      +  ++  V  G GAFYGPK +  +
Sbjct: 418 EIDLSTRPEKSVGPEAIWDQATQALRSALD------KKGLDYAVDEGGGAFYGPKIDIKI 471

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +DAIGR WQC T+Q+DFNLP RF   YV     +  P+MIHRAV GS+ERF G++IE+++
Sbjct: 472 EDAIGRKWQCSTVQLDFNLPERFAMEYVAEDGARHRPIMIHRAVLGSLERFFGVLIEHYE 531

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+PIQ +V +IT     YA+++   +K+       D RNE I +KIREH++++I
Sbjct: 532 GKFPPWLAPIQVVVMSITDRQEGYARQVEETMKNKGFRSLLDLRNEKIGFKIREHTLRRI 591

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++ GD+E + +++ +R
Sbjct: 592 PYLLVIGDREVANQTVAVR 610


>gi|254527233|ref|ZP_05139285.1| threonyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
 gi|221538657|gb|EEE41110.1| threonyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
          Length = 638

 Score =  610 bits (1574), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 292/618 (47%), Positives = 420/618 (67%), Gaps = 15/618 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS K F    T  ++A+SI   LAK  +A  +N  + D + P+ R+  + IIT +
Sbjct: 4   ITLPDGSKKVFEKSVTILEIAQSIGAGLAKATIAGKVNDVLLDATIPINRDSKVVIITSK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   + +IRHS AH++  AV+ I+ ++++AIGP+IEDGFYYD   E  F+ ++L +IE +
Sbjct: 64  DKEGIEIIRHSFAHLIGHAVKQIYSDIKMAIGPVIEDGFYYDIFSEYRFTPEDLIKIENR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           + ++I  +       +S ++A + F+ + E +K+ I+E IP +  + LY+  E+ D+CRG
Sbjct: 124 INKLIKTNYDVEILQVSKKEAIKTFKERDETFKLRIIEDIPEEGLINLYKHEEYIDMCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +T  ++ F KL+K++G+YWRG+S    L RIYGTAW  ++EL  YL  +EE+EKRD
Sbjct: 184 PHVPNTRHLRHF-KLLKLSGSYWRGNSENESLQRIYGTAWAKEKELNNYLKRIEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHL 304
           HRKL ++  LFHI E+  G+IFWH  GW I+Q L  Y+R  +K +DY EI TPQ +D+ L
Sbjct: 243 HRKLGKKHSLFHIQEESPGMIFWHPNGWTIYQVLEKYIREILKKNDYLEIKTPQAVDKSL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHW+ +R +MF       T  + RT+A+KPMNCP H+ VFN GLKSY++LP+RLAE
Sbjct: 303 WEKSGHWEKFRDDMFT------TASENRTYAIKPMNCPCHIQVFNQGLKSYKDLPIRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNEPSG+LHGLMRVR FTQDDAH+FCT+EQ+  E     +L+  +YK FGF++I+
Sbjct: 357 FGSCHRNEPSGALHGLMRVRNFTQDDAHIFCTEEQIQEEVSTFIDLVFEVYKTFGFDEII 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +KLSTRPEK+VGS+ +WD +E  +   LD  KN     +   +  GEGAFYGPK E+ LK
Sbjct: 417 IKLSTRPEKKVGSEEIWDKSEEALTKALDN-KN-----LKWELQPGEGAFYGPKIEFSLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D + R WQCGTIQVDF++P R +A YV+  +EK +PVM+HRA+ GS ERFIGI+IE ++ 
Sbjct: 471 DCLNRVWQCGTIQVDFSMPVRLDATYVDIDNEKRNPVMLHRAILGSFERFIGILIEQYEA 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P+WL+P Q  + +IT   +E   +   LL ++      D RNE I YKIRE ++ ++P
Sbjct: 531 KFPIWLAPYQITLLSITDRNIEKCLKFNELLINNGYRSTVDIRNEKIGYKIREATLGRVP 590

Query: 605 IIIICGDKEASERSIGIR 622
           +I + GDKE    S+ +R
Sbjct: 591 LIAVIGDKEEEIDSVSLR 608


>gi|295696884|ref|YP_003590122.1| threonyl-tRNA synthetase [Bacillus tusciae DSM 2912]
 gi|295412486|gb|ADG06978.1| threonyl-tRNA synthetase [Bacillus tusciae DSM 2912]
          Length = 641

 Score =  610 bits (1573), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 293/643 (45%), Positives = 434/643 (67%), Gaps = 17/643 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           +++   DGS++ F   AT ++VA ++SRSL K AVA   NGK+ DLS PV+E G +E +T
Sbjct: 9   VRIRLKDGSVREFQKGATLAEVAGTLSRSLGKHAVAAKWNGKLVDLSTPVQEDGEVEFVT 68

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +DP  L V RH+CAH+MA+AV  ++P  + AIGP+IEDGFYYDF  +  F+ ++L +IE
Sbjct: 69  LDDPEGLEVYRHTCAHVMAQAVSRLFPGAKFAIGPVIEDGFYYDF-ADHEFTPEDLPKIE 127

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           ++M+ ++  D P  ++ L  ++A E+F  + + +KVEI+  +P    +T+Y QGE+ DLC
Sbjct: 128 QEMERVVKEDLPIRREVLGRDEALEMFRGRDDRFKVEIIRDLPPDAVITVYHQGEFTDLC 187

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG++K F KL+ +AGAYWRGDSNR ML+RIY TA+ TQ++L +YL  +EE+ K
Sbjct: 188 RGPHLPSTGRIKAF-KLLSLAGAYWRGDSNREMLTRIYATAFPTQRQLEEYLRRVEEARK 246

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHR++ R+++LF  A++  G+ F   KG  I   L  +MR  + + DYEE+ TP ++D+
Sbjct: 247 RDHRRVGRDLELFFFADEAPGMPFLLPKGMVIRNELERFMREFLNEYDYEEVKTPILMDR 306

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y+ NM+  +       D R FALKPMNCPGH   F H ++SYR+LP+R+
Sbjct: 307 VLWERSGHWDHYKENMYFTEV------DEREFALKPMNCPGHALTFKHRVRSYRDLPIRM 360

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFG ++R+E SG+LHGL+RVR FTQDDAH+F   +Q+ +E     +LI  +Y  FGF  
Sbjct: 361 AEFGLLHRHELSGALHGLLRVREFTQDDAHLFVRPDQIQDEVFACMDLIDRVYAAFGF-P 419

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE   GSD LW+ A   ++  L++     Q  IN G    +GAFYGPK ++ 
Sbjct: 420 YRVELSTRPENSTGSDELWEAATEGLRKALESRGLEYQ--INEG----DGAFYGPKIDFH 473

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KD++GR  QCGTIQ+DF +P +F+  YV   +E+  PVMIHRAV GS ERF G++IE++
Sbjct: 474 VKDSLGRSHQCGTIQLDFQMPEKFDLTYVGEDNERHRPVMIHRAVLGSFERFFGLLIEHY 533

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P+WL+P+QA V TI +  + YA+E+ +  ++  L +E D R E I YK+RE  ++K
Sbjct: 534 NGAFPVWLAPVQARVLTIGAGHLPYAKEVQSRARAMGLRVEVDGRAEKIGYKVREAQVQK 593

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           IP +++ GD+EA    + +R+ G     + S  + +  + +E+
Sbjct: 594 IPYMLVIGDQEAQTGEVSVRKRGQGDLGRRSAEEVLVAIAEEA 636


>gi|157375257|ref|YP_001473857.1| threonyl-tRNA synthetase [Shewanella sediminis HAW-EB3]
 gi|189083624|sp|A8FV56|SYT_SHESH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|157317631|gb|ABV36729.1| threonyl-tRNA synthetase [Shewanella sediminis HAW-EB3]
          Length = 642

 Score =  610 bits (1572), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 280/633 (44%), Positives = 412/633 (65%), Gaps = 16/633 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPE 65
           +T PDGS + F    +  DVA  I   LAK  +A  +NG++ D  D +   S + IIT +
Sbjct: 4   ITLPDGSKREFANPVSTLDVAADIGPGLAKACIAGRVNGELKDACDIIDTDSELSIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   + ++RHSCAH++  A + +WPE ++AIGP+I++GFYYD D +   + +++  ++K+
Sbjct: 64  DEEGVEILRHSCAHLLGHAFKQLWPEAKMAIGPVIDNGFYYDIDLDHKLTQEDIDALQKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M ++   +    K+  S + AR+ FE++ E YK+E+L E+I   +   LY   E+ D+CR
Sbjct: 124 MTQLAKTNYKVEKRVGSWQVARDTFEARGETYKMEVLDENISKDDQPALYHHEEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +  + FKLM VAGAYWRG+S+  ML R+YGTAW  ++ L  +L  LEE+ KR
Sbjct: 184 GPHVPNM-KFCQNFKLMSVAGAYWRGNSDNKMLQRVYGTAWADKKALKVHLNRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW +F  L  ++R+K+    Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWSLFLELEKFIRQKLGQYTYQEVKGPLMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SGHWD Y   MF     +      R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWERSGHWDKYADAMFTTNSEN------REYAIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFG  +RNEPSGSLHGLMRVRGFTQDDAHVFCT++Q+  E      ++   Y+ FGF+ I
Sbjct: 357 EFGCCHRNEPSGSLHGLMRVRGFTQDDAHVFCTEDQVQQEVSACIKMVYDTYETFGFKDI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+G D +WD +E  +K  L      + + I   +L GEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEKRIGDDDMWDRSEEALKQAL------TANGIAYEILPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+D+ LP R  A YV   + +  PVMIHRA+ GS+ERF+GI+IE + 
Sbjct: 471 HDCLDRAWQCGTVQLDYALPGRLGATYVAEDNSRQTPVMIHRAILGSLERFLGILIEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+Q +V  IT    +Y  E+ N+ K   +    D RNE I +KIREH+++++
Sbjct: 531 GKFPTWLAPMQVVVMNITDKQSDYVDEVVNIFKESGIRASKDLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
           P +++ GD+E   + + +R        K+ + D
Sbjct: 591 PYLLVVGDQEMDNKEVAVRTRDGVDLGKMRIED 623


>gi|87198229|ref|YP_495486.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Novosphingobium
           aromaticivorans DSM 12444]
 gi|123749972|sp|Q2GBX1|SYT_NOVAD RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|87133910|gb|ABD24652.1| Ser-tRNA(Thr) hydrolase [Novosphingobium aromaticivorans DSM 12444]
          Length = 664

 Score =  609 bits (1571), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 306/665 (46%), Positives = 433/665 (65%), Gaps = 16/665 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDP-VREGSI 59
           M   +K+T PDGS++     +T +D+A +I   LAK A+A  ++G++ DL+ P   +  +
Sbjct: 1   MSELLKITLPDGSVREVAPGSTPADIAAAIGPGLAKAALAAKVDGELVDLTRPFTADAQL 60

Query: 60  EIITPED-PRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF-DKEQPFSSD 117
            ++T +D   +L + RH  AH++AEAVQ+++P  Q+  GP  +DGFYYDF  K++PF+ +
Sbjct: 61  ALVTAKDEAEALDLARHDYAHVLAEAVQALFPGTQITFGPSTDDGFYYDFAPKDRPFTDE 120

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +L  IE +M++IIA + P  ++  S E+    ++ + E++K E    +P  E +T+Y  G
Sbjct: 121 DLPAIEAEMRKIIAANKPLRREVWSREQLISRWKQQGESFKAEWAAELPENEELTVYWSG 180

Query: 178 E-WFDLCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
           + W D+CRGPH+ STG++    FKL +V+GAYWRGD    MLSR+YGT W  +++L  +L
Sbjct: 181 DDWLDMCRGPHLPSTGKLDPNAFKLTRVSGAYWRGDQKNAMLSRVYGTGWLNKKQLDAHL 240

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEI 294
             LEE+ KRDHRKL  EMDLFH+ ++  G +FWH KG+ I++ L +YMRR I    Y E+
Sbjct: 241 TRLEEAAKRDHRKLGNEMDLFHLQQEAHGSVFWHPKGYLIWRELEAYMRRAIDGAGYREV 300

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFA----VKCADD----TIKDLRTFALKPMNCPGHVA 346
            TPQV+D   W+QSGHW  YR NMF     V   DD       D    ALKPMNCP HV 
Sbjct: 301 KTPQVMDARQWEQSGHWGKYRENMFVIPDEVPNVDDEGPIVSNDADWMALKPMNCPAHVL 360

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           +F  G+KSYRELP+RL E G  +RNEP G+LHGLMRVR FTQDDAH+FC ++Q+ +E   
Sbjct: 361 IFRQGIKSYRELPLRLYENGCCHRNEPHGALHGLMRVRQFTQDDAHIFCREDQIVSEVQA 420

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
              L   IYK FGF    +KL+ RPEKR G++ +WD AE  ++  +     ++++     
Sbjct: 421 FCELADRIYKHFGF-TYSIKLALRPEKRFGTEEMWDKAERELRDAVVRAGLATEE-YGWE 478

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
            L GEGAFY PK E+ L DAIGR WQ GTIQ D  LP R +A Y+    EK  PVM+HRA
Sbjct: 479 ELPGEGAFYAPKLEWHLTDAIGRTWQVGTIQSDRVLPERLDASYIGEDGEKHRPVMLHRA 538

Query: 527 VFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF 586
           +FGS ERFIGI+IE+F G LP+WL+P+QA+V TI S A +YA++    LK+  +  +TD 
Sbjct: 539 IFGSYERFIGILIEHFAGRLPVWLAPVQAVVATIVSDADDYARDALAKLKAAGIRADTDL 598

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           RNE INYK+REHS++K+P +++ G +EA E ++ IR  G    + + L +AI +L  E+ 
Sbjct: 599 RNEKINYKVREHSLQKVPYLLVVGKREAEEGTVAIRILGEQHQKVMPLDEAIALLKGEAT 658

Query: 647 PPDCQ 651
            PD +
Sbjct: 659 APDLR 663


>gi|78044971|ref|YP_360408.1| threonyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901]
 gi|123770579|sp|Q3ABS6|SYT_CARHZ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|77997086|gb|ABB15985.1| threonyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901]
          Length = 634

 Score =  609 bits (1571), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 304/623 (48%), Positives = 420/623 (67%), Gaps = 16/623 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           I L FP+  ++ FP + T  +VA+++S  LAK+A+  +INGK+ DLS  + E G   + T
Sbjct: 2   ISLKFPNNEVREFPENITALEVAKTLSPRLAKEALCASINGKLIDLSQKISESGEFRLYT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            ED     V RHS AH+MA+AV+ ++P+ ++AIGP I+DGFYYDFD E+ FS ++L +IE
Sbjct: 62  FEDDEGKDVFRHSSAHLMAQAVKRLFPKTKLAIGPAIKDGFYYDFDPEESFSPEDLEKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M++I+  D P  +  LS ++A + FE K E YKVE+++ IP    ++ YRQGE+ DLC
Sbjct: 122 AEMEKIVKEDLPIERFVLSRDEAIKFFEEKGEIYKVELVKDIPEGVEISFYRQGEFVDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPHV STG +K F KL+ +AGAYWRG+    ML RIYG ++  +  LT YL FLEE++K
Sbjct: 182 TGPHVPSTGYLKAF-KLLNIAGAYWRGNEKNKMLQRIYGVSFPKKSMLTDYLNFLEEAKK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQ 302
           RDHRK+ +E+DLF + E+G G  F+H KG  I   L ++ R K +   Y+EI TP +L++
Sbjct: 241 RDHRKIGQELDLFSLQEEGPGFPFFHPKGMVIRNELENFWREKHRLAGYQEIKTPIILNR 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHW  Y+ NM+  K  D      + +A+KPMNCPG + V+ + L SYRE P+RL
Sbjct: 301 ELWERSGHWAHYKENMYFTKIDD------QDYAIKPMNCPGSILVYKNKLHSYREFPIRL 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AE G V+R+E SG LHGLMRVR FTQDDAH+F   EQ+ +E + + NLI   Y+ FGFE 
Sbjct: 355 AELGLVHRHELSGVLHGLMRVRCFTQDDAHIFMLPEQVKDEIIGVINLIDEFYRLFGFE- 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +GSD LW+ A N +K  L+  +     +IN G    +GAFYGPK ++ 
Sbjct: 414 YHVELSTRPENSMGSDELWELATNSLKEALE--ERGLPYKINEG----DGAFYGPKIDFH 467

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LKD +GR WQCGTIQ+DF +P +F+  Y+    +K  PVMIHR VFGSIERFIGI+IE++
Sbjct: 468 LKDCLGRTWQCGTIQLDFQMPEKFDLTYIGEDGQKHRPVMIHRVVFGSIERFIGILIEHY 527

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P+WLSP+Q  V T+     EY QEI   L +  + +E D RNETI YKIRE  ++K
Sbjct: 528 AGAFPVWLSPVQVRVITVAERHREYGQEIYQKLFNQGVRVELDDRNETIGYKIREGQMQK 587

Query: 603 IPIIIICGDKEASERSIGIRRFG 625
           IP ++I GDKE  + S+ +R+ G
Sbjct: 588 IPYLLIVGDKEIEQGSVAVRKRG 610


>gi|302325997|gb|ADL25198.1| threonine--tRNA ligase [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 645

 Score =  608 bits (1569), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 300/633 (47%), Positives = 426/633 (67%), Gaps = 27/633 (4%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEI 61
           S I+LTFPDGS+++     TG ++A+SIS  LA+KA+ V +  KV DL+ P+ E G+I+I
Sbjct: 2   SQIELTFPDGSVRSVASGTTGLEIAKSISEGLARKALGVKLGDKVLDLNRPLTESGAIKI 61

Query: 62  ITP--EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           ITP  +DP +L ++RHSC+H++AEA+  ++P  ++A GP I+ GFYYD     P    + 
Sbjct: 62  ITPNNDDPDALMLLRHSCSHVLAEAICDLFPGTKLAYGPAIDKGFYYDLMTPTPIQQSDF 121

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN----VTLYR 175
            +IEK+M+EII  D PF++  +S E   +  E  K  YK +  +   A+E     ++ Y 
Sbjct: 122 ERIEKRMKEIIKEDRPFVRCEVSAEDGLKRTEGDK--YKTDNAQRALAREGSDGTLSFYV 179

Query: 176 QGE----WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQEL 231
            GE    + DLC GPHV STG++K F K++ ++GAYW GD N   L+R+YGT +  ++ L
Sbjct: 180 TGEPGKNFEDLCAGPHVPSTGKLKNF-KVLSMSGAYWHGDQNSDQLTRVYGTCFADKEGL 238

Query: 232 TQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDD 290
             YL FLEE+EKRDHRK+ +EMDL+HI +   G++FWH KG K+   L  Y+R KI +  
Sbjct: 239 ETYLKFLEEAEKRDHRKIGKEMDLYHIEDHSPGMVFWHPKGTKMVNALKDYIRGKIDRRG 298

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH 350
           Y E+ TP+++++ LW +SGH D Y  NMF     D  +      A+KPMNCP H+ +FN 
Sbjct: 299 YLEVITPEIVNKTLWIKSGHADKYNENMFKTLAGDVEM------AVKPMNCPCHIQIFNT 352

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
           GL+S+R+LP+RLAEFG  +R EP+G++HGLMRVRGF QDDAH+FCT++Q+ +E      L
Sbjct: 353 GLRSWRDLPMRLAEFGKCHRYEPAGTMHGLMRVRGFVQDDAHIFCTEDQIASEVADFCAL 412

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
           +  IY DFGF+ I+VK STRPEKRVGSD +WD AE  +    +  K +  D I   +  G
Sbjct: 413 VKEIYHDFGFDDIVVKFSTRPEKRVGSDEIWDKAEAALA---EATKLAGLDYI---LNPG 466

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           EGAFYGPK E+ LKD++GRDWQCGTIQVDFNLP R  A YV   ++K  PVM+HRA  GS
Sbjct: 467 EGAFYGPKLEFTLKDSLGRDWQCGTIQVDFNLPQRLGAEYVGKDNQKHIPVMLHRAAVGS 526

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
           IERF+GI+IE F G+ PLWL+P+QA V  I+   V+YA+++   L +  + +E D  NE 
Sbjct: 527 IERFLGILIEEFMGDFPLWLAPVQARVLPISEKFVDYAKQVEKELVNAGVRVEVDESNEK 586

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRR 623
           + YKIR+  ++K+P ++I G+KE ++  + +R+
Sbjct: 587 LGYKIRQCELQKVPYLLIVGEKEVADGVVSVRK 619


>gi|163752580|ref|ZP_02159762.1| threonyl-tRNA synthetase [Shewanella benthica KT99]
 gi|161327534|gb|EDP98738.1| threonyl-tRNA synthetase [Shewanella benthica KT99]
          Length = 642

 Score =  608 bits (1569), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 281/619 (45%), Positives = 406/619 (65%), Gaps = 16/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPE 65
           +T PDGS + F    +  DVA  I   LAK  +A  +NG++ D  D +   S + IIT +
Sbjct: 4   ITLPDGSKREFANPVSTLDVAADIGPGLAKACIAGRVNGELKDACDIIDTDSELSIITVK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   + ++RHSCAH++  A + +WPE ++AIGP+I++GFYYD D E   + +++  ++K+
Sbjct: 64  DEEGVEILRHSCAHLLGHAFKQLWPEAKMAIGPVIDNGFYYDIDLEHKLTQEDIDALQKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M ++   +    K+  S + AR+ F ++ E YK+ IL E+I   +   LY   E+ D+CR
Sbjct: 124 MTQLAKTNYKVEKRVGSWQVARDTFAARGETYKMAILDENISKDDQPALYHHEEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +  + FKLM VAGAYWRG+S+  ML R+YGTAW  ++ L  +L  LEE+ KR
Sbjct: 184 GPHVPNM-RFCQNFKLMSVAGAYWRGNSDNKMLQRVYGTAWADKKALKIHLNRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW +F  L  ++R K+    Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWTLFLELEKFIREKLGQYTYQEVKGPLMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SGHWD Y   MF  K  +      R + +KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWERSGHWDKYSEAMFTTKSEN------REYVIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFG  +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+  E      ++   Y  FGF  I
Sbjct: 357 EFGCCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQVQQEVSACIKMVYDTYATFGFNNI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           ++KLSTRPE+R+G D +WD AE  +K  L  I N     I   +L GEGAFYGPK E+ L
Sbjct: 417 VIKLSTRPEQRIGDDEMWDRAEEALKQAL--IAND----IEFEILPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+D+ LP R  A YV   + +  PVMIHRA+ GS+ERF+GI+IE + 
Sbjct: 471 HDCLDRAWQCGTVQLDYALPGRLGATYVAEDNSRQTPVMIHRAILGSLERFLGILIEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+Q +V  IT    +YA E+ NLLK + +    D RNE I +KIREH+++++
Sbjct: 531 GKFPTWLAPMQVVVMNITDKQSDYAHEVVNLLKENGIRASKDLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++ GD+E   + + +R
Sbjct: 591 PYLLVVGDQEMENKEVAVR 609


>gi|261416474|ref|YP_003250157.1| threonyl-tRNA synthetase [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261372930|gb|ACX75675.1| threonyl-tRNA synthetase [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 695

 Score =  608 bits (1567), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 300/633 (47%), Positives = 426/633 (67%), Gaps = 27/633 (4%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEI 61
           S I+LTFPDGS+++     TG ++A+SIS  LA+KA+ V +  KV DL+ P+ E G+I+I
Sbjct: 52  SQIELTFPDGSVRSVASGTTGLEIAKSISEGLARKALGVKLGDKVLDLNRPLTESGAIKI 111

Query: 62  ITP--EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           ITP  +DP +L ++RHSC+H++AEA+  ++P  ++A GP I+ GFYYD     P    + 
Sbjct: 112 ITPNNDDPDALMLLRHSCSHVLAEAICDLFPGTKLAYGPAIDKGFYYDLMTPTPIQQSDF 171

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN----VTLYR 175
            +IEK+M+EII  D PF++  +S E   +  E  K  YK +  +   A+E     ++ Y 
Sbjct: 172 ERIEKRMKEIIKEDRPFVRCEVSAEDGLKRTEGDK--YKTDNAQRALAREGSDGTLSFYV 229

Query: 176 QGE----WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQEL 231
            GE    + DLC GPHV STG++K F K++ ++GAYW GD N   L+R+YGT +  ++ L
Sbjct: 230 TGEPGKNFEDLCAGPHVPSTGKLKNF-KVLSMSGAYWHGDQNSDQLTRVYGTCFADKEGL 288

Query: 232 TQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDD 290
             YL FLEE+EKRDHRK+ +EMDL+HI +   G++FWH KG K+   L  Y+R KI +  
Sbjct: 289 ETYLKFLEEAEKRDHRKIGKEMDLYHIEDHSPGMVFWHPKGTKMVNALKDYIRGKIDRRG 348

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH 350
           Y E+ TP+++++ LW +SGH D Y  NMF     D  +      A+KPMNCP H+ +FN 
Sbjct: 349 YLEVITPEIVNKTLWIKSGHADKYNENMFKTLAGDVEM------AVKPMNCPCHIQIFNT 402

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
           GL+S+R+LP+RLAEFG  +R EP+G++HGLMRVRGF QDDAH+FCT++Q+ +E      L
Sbjct: 403 GLRSWRDLPMRLAEFGKCHRYEPAGTMHGLMRVRGFVQDDAHIFCTEDQIASEVADFCAL 462

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
           +  IY DFGF+ I+VK STRPEKRVGSD +WD AE  +    +  K +  D I   +  G
Sbjct: 463 VKEIYHDFGFDDIVVKFSTRPEKRVGSDEIWDKAEAALA---EATKLAGLDYI---LNPG 516

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           EGAFYGPK E+ LKD++GRDWQCGTIQVDFNLP R  A YV   ++K  PVM+HRA  GS
Sbjct: 517 EGAFYGPKLEFTLKDSLGRDWQCGTIQVDFNLPQRLGAEYVGKDNQKHIPVMLHRAAVGS 576

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
           IERF+GI+IE F G+ PLWL+P+QA V  I+   V+YA+++   L +  + +E D  NE 
Sbjct: 577 IERFLGILIEEFMGDFPLWLAPVQARVLPISEKFVDYAKQVEKELVNAGVRVEVDESNEK 636

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRR 623
           + YKIR+  ++K+P ++I G+KE ++  + +R+
Sbjct: 637 LGYKIRQCELQKVPYLLIVGEKEVADGVVSVRK 669


>gi|157413014|ref|YP_001483880.1| threonyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215]
 gi|166987324|sp|A8G3W3|SYT_PROM2 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|157387589|gb|ABV50294.1| Threonyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215]
          Length = 638

 Score =  608 bits (1567), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 291/618 (47%), Positives = 420/618 (67%), Gaps = 15/618 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPE 65
           +T PDGS K F    T  ++A+SI   LAK  +A  +N  + D + P+   S + IIT +
Sbjct: 4   ITLPDGSKKVFEKSVTILEIAQSIGAGLAKATIAGKVNDVLLDATIPINSDSKVVIITSK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   + +IRHS AH++  AV+ I+ ++++AIGP+IEDGFYYD   E  F+ ++L +IE +
Sbjct: 64  DKEGIEIIRHSFAHLIGHAVKQIYSDIKMAIGPVIEDGFYYDIFSEYRFTPEDLIKIENR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           + ++I  +       +S ++A + F+ + E +K+ I+E IP +  + LY+  E+ D+CRG
Sbjct: 124 INKLIKTNYDVEILQVSKKEAIKTFKERDETFKLRIIEDIPEEGLINLYKHEEYIDMCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +T  ++ F KL+K++G+YWRG+S    L RIYGTAW  ++EL  YL  +EE+EKRD
Sbjct: 184 PHVPNTRHLRHF-KLLKLSGSYWRGNSENESLQRIYGTAWAKEKELNDYLKRIEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHL 304
           HRKL ++  LFHI E+  G+IFWH  GW I+Q L  Y+R  +K +DY EI TPQ +D+ L
Sbjct: 243 HRKLGKKHSLFHIQEESPGMIFWHPNGWTIYQVLEKYIREILKKNDYLEIKTPQAVDKSL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHW+ +R +MF       T  + RT+A+KPMNCP H+ VFN GLKSY++LP+RLAE
Sbjct: 303 WEKSGHWEKFRDDMFT------TASENRTYAIKPMNCPCHIQVFNQGLKSYKDLPIRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNEPSG+LHGLMRVR FTQDDAH+FCT+EQ+  E     +L+  +YK FGF++I+
Sbjct: 357 FGSCHRNEPSGALHGLMRVRNFTQDDAHIFCTEEQIQEEVSTFIDLVFEVYKTFGFDEII 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +KLSTRP+K+VGS+ +WD +E  +   LD  KN     +   +  GEGAFYGPK E+ LK
Sbjct: 417 IKLSTRPKKKVGSEEIWDKSEEALTKALDN-KN-----LKWELQPGEGAFYGPKIEFSLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D + R WQCGTIQVDF++P R +A YV+  +EK +PVM+HRA+ GS ERFIGI+IE ++ 
Sbjct: 471 DCLNRVWQCGTIQVDFSMPIRLDATYVDIDNEKRNPVMLHRAILGSFERFIGILIEQYEA 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P+WL+P Q  + +IT   +E   +   LL ++      D RNE I YKIRE +++++P
Sbjct: 531 KFPIWLAPYQLTLLSITDRNIEKCLKFNELLINNGYRSTVDIRNEKIGYKIREATLERVP 590

Query: 605 IIIICGDKEASERSIGIR 622
           +I + GDKE    S+ +R
Sbjct: 591 LIAVIGDKEEEIDSVSLR 608


>gi|257456688|ref|ZP_05621878.1| threonyl-tRNA synthetase [Treponema vincentii ATCC 35580]
 gi|257445881|gb|EEV20934.1| threonyl-tRNA synthetase [Treponema vincentii ATCC 35580]
          Length = 586

 Score =  605 bits (1561), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 289/564 (51%), Positives = 395/564 (70%), Gaps = 22/564 (3%)

Query: 67  PRS--LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           P+S  L +IRHS AHIMAEAV +++P  +VAIGP IE GFYYDFD   P + ++LA+IEK
Sbjct: 6   PKSEKLPLIRHSIAHIMAEAVMNLFPGTKVAIGPAIEHGFYYDFDLPTPITQNDLARIEK 65

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
           +M+ +++    F+K+ ++ ++A +LF  K + +K E++  +P    +++YR G + DLC+
Sbjct: 66  EMRRLLSTPQNFVKEVVTRQQALDLF--KDQPFKCELINDLPPDAEISIYRSGNFVDLCK 123

Query: 185 GPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           GPHV ++ ++  + FKL K+AGAYWRGD  RPML+RIYGTAW T  +L  YL    E+EK
Sbjct: 124 GPHVANSKEINAQSFKLEKIAGAYWRGDEKRPMLTRIYGTAWETPNDLKTYLTMQAEAEK 183

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQ 302
            DHRK+ RE+DLFHI ED  G +FWH  GW ++ T+  ++R+KIK+D Y E+NTP V+ Q
Sbjct: 184 HDHRKIGRELDLFHIEEDNPGEVFWHPNGWTLYLTVQQHVRQKIKEDGYVEVNTPFVMPQ 243

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW +SGHW+ Y+ NMF       T  + R FALKPMNCPGHV +F  G+KSYR+LP+R+
Sbjct: 244 SLWLRSGHWEKYKENMFI------TESEKRMFALKPMNCPGHVEIFKQGIKSYRDLPLRI 297

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE- 421
           AEFGS  RNEPSGSLHG+MRVRGF QDDAH+FCT+EQ+ +E  K  NL+ S+Y+DFGF+ 
Sbjct: 298 AEFGSCTRNEPSGSLHGIMRVRGFVQDDAHIFCTEEQISSEVCKFCNLLKSLYRDFGFDD 357

Query: 422 -KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
             I+VK STRPEKRVG DA WD AEN    + +  K +    +   +  GEGAFYGPK E
Sbjct: 358 KAILVKFSTRPEKRVGDDATWDRAEN---ALAEACKAAG---LEYEIAPGEGAFYGPKLE 411

Query: 481 YILKDAIGRDWQCGTIQVDFNLPS--RFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           + L DA+GR+WQCGTIQ D+ LPS  R NA Y+   ++K  PVM+HRA  GS+ERFIGI+
Sbjct: 412 FTLVDALGREWQCGTIQADYQLPSKDRLNAEYIGEDNQKHQPVMLHRAALGSLERFIGIL 471

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE F G LP WLSP+QA+V  +     EYA++IA++L      ++ D   + +N KIR++
Sbjct: 472 IEQFGGALPPWLSPVQAMVIPVAPVFNEYAEQIASVLTKAGFRVKADIDTDRMNAKIRKY 531

Query: 599 SIKKIPIIIICGDKEASERSIGIR 622
             +KIP  ++ G+KE    S+ +R
Sbjct: 532 QEQKIPYQLVVGEKEKQSNSVTVR 555


>gi|42526600|ref|NP_971698.1| threonyl-tRNA synthetase [Treponema denticola ATCC 35405]
 gi|73919840|sp|Q73NR2|SYT_TREDE RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|41816793|gb|AAS11579.1| threonyl-tRNA synthetase [Treponema denticola ATCC 35405]
          Length = 585

 Score =  604 bits (1558), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 293/579 (50%), Positives = 403/579 (69%), Gaps = 24/579 (4%)

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           E  + L  +RHS AH+MAEAV +++P  +VAIGP I+ GFYYDF+  +P ++D+L  IEK
Sbjct: 6   EKSKKLGTLRHSTAHVMAEAVVNLFPGTKVAIGPAIDYGFYYDFELPRPINNDDLPAIEK 65

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
           +M++I+   S F K+ +S EKA E+F  K + +K+E+++ +PA E +++Y+ GE+ DLCR
Sbjct: 66  EMRKILTTRSNFEKEVISREKALEMF--KDQPFKIELIKGLPADEEISIYKSGEFTDLCR 123

Query: 185 GPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           GPHV S   +  + FKLMK+AGAYWRGD  RPML+RIYGTAW    +L +YL  LEE+EK
Sbjct: 124 GPHVCSMADINAQGFKLMKIAGAYWRGDETRPMLTRIYGTAWEKPNDLKEYLAMLEEAEK 183

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQ 302
           RDHR++ + M+LFHI E+  G IFWH KGW ++ T+ +Y+R++IK+D Y E++TP V+ +
Sbjct: 184 RDHRRIGKAMNLFHIDEENPGQIFWHPKGWTLYLTIQNYVRKRIKEDGYLEVHTPFVMPR 243

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHW  Y+ NMF       T  + R FALKPMNCPGHV +F  G+KSY++LP+RL
Sbjct: 244 SLWERSGHWAKYKENMFI------TESEKRLFALKPMNCPGHVEIFKQGIKSYKDLPLRL 297

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF-- 420
           AEFGS  RNEPSGSLHG+MR+RGF QDDAH+FCT+EQ+ +E  K   L+  +Y DFGF  
Sbjct: 298 AEFGSCTRNEPSGSLHGIMRIRGFVQDDAHIFCTEEQISSEVSKFCALLKRMYADFGFAE 357

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           +KI+VK STRPE+RVG DA WD AE   K + D   ++    +   +  GEGAFYGPK E
Sbjct: 358 DKILVKFSTRPEQRVGDDATWDRAE---KALSDACADAG---LKYEIAEGEGAFYGPKLE 411

Query: 481 YILKDAIGRDWQCGTIQVDFNLPS--RFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           + L DA+GR+WQCGTIQ+D+ LPS  R NA Y+   + K HPVM+HRAV GS+ERFIGI+
Sbjct: 412 FTLIDALGREWQCGTIQLDYQLPSAERLNAEYIGDDNNKHHPVMLHRAVLGSLERFIGIL 471

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IEN  G +P WL+P+QA++  +  +  EYAQ++  +L      +  D   + +N KIR+H
Sbjct: 472 IENCAGIMPPWLAPVQAVIVPVAPAFNEYAQKVQKVLDEKGFRVIADIGTDRMNAKIRKH 531

Query: 599 SIKKIPIIIICGDKEASERSIGIR-RFGSTTTQKVSLLD 636
             +K+   +I G  E    S+ +R R G    QKV  LD
Sbjct: 532 QEEKVIYQLIVGQSEMDNNSVAVRMRKGG---QKVMTLD 567


>gi|325473136|gb|EGC76332.1| threonyl-tRNA synthetase [Treponema denticola F0402]
          Length = 585

 Score =  604 bits (1557), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 293/579 (50%), Positives = 403/579 (69%), Gaps = 24/579 (4%)

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           E  + L  +RHS AH+MAEAV +++P  +VAIGP I+ GFYYDF+  +P ++D+L  IEK
Sbjct: 6   EKSKKLGTLRHSTAHVMAEAVVNLFPGTKVAIGPAIDYGFYYDFELPRPINNDDLPAIEK 65

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
           +M++I+   S F K+ +S EKA E+F  K + +K+E+++ +PA E +++Y+ GE+ DLCR
Sbjct: 66  EMRKILTTRSNFEKEVISREKALEMF--KDQPFKIELIKDLPADEEISIYKSGEFTDLCR 123

Query: 185 GPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           GPHV S   +  + FKLMK+AGAYWRGD  RPML+RIYGTAW    +L +YL  LEE+EK
Sbjct: 124 GPHVCSMADINAQGFKLMKIAGAYWRGDETRPMLTRIYGTAWEKPNDLKEYLAMLEEAEK 183

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQ 302
           RDHRK+ + M+LFHI E+  G +FWH KGW ++ T+ +Y+R++IK+D Y E++TP V+ +
Sbjct: 184 RDHRKVGKAMNLFHIDEENPGQVFWHPKGWTLYLTIQNYVRKRIKEDGYLEVHTPFVMPR 243

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHW  Y+ NMF       T  + R FALKPMNCPGHV +F  G+KSY++LP+RL
Sbjct: 244 SLWERSGHWAKYKENMFI------TESEKRLFALKPMNCPGHVEIFKQGIKSYKDLPLRL 297

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF-- 420
           AEFGS  RNEPSGSLHG+MR+RGF QDDAH+FCT+EQ+ +E  K   L+  +Y DFGF  
Sbjct: 298 AEFGSCTRNEPSGSLHGIMRIRGFVQDDAHIFCTEEQISSEVSKFCALLKRMYADFGFAE 357

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           +KI+VK STRPE+RVG DA WD AE   K + D   ++    +   +  GEGAFYGPK E
Sbjct: 358 DKILVKFSTRPEQRVGDDATWDRAE---KALSDACADAG---LKYEIAEGEGAFYGPKLE 411

Query: 481 YILKDAIGRDWQCGTIQVDFNLPS--RFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           + L DA+GR+WQCGTIQ+D+ LPS  R NA Y+   + K HPVM+HRAV GS+ERFIGI+
Sbjct: 412 FTLIDALGREWQCGTIQLDYQLPSAERLNAEYIGDDNNKHHPVMLHRAVLGSLERFIGIL 471

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IEN  G +P WL+P+QA++  +  +  EYAQ++  +L      +  D   + +N KIR+H
Sbjct: 472 IENCAGIMPPWLAPVQAVIVPVAPAFNEYAQKVQKVLDEKGFRVIADIGTDRMNAKIRKH 531

Query: 599 SIKKIPIIIICGDKEASERSIGIR-RFGSTTTQKVSLLD 636
             +K+   +I G  E    S+ +R R G    QKV  LD
Sbjct: 532 QEEKVIYQLIVGQSEMDNNSVAVRMRKGG---QKVMTLD 567


>gi|117923678|ref|YP_864295.1| threonyl-tRNA synthetase [Magnetococcus sp. MC-1]
 gi|259516564|sp|A0L4J6|SYT_MAGSM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|117607434|gb|ABK42889.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Magnetococcus
           sp. MC-1]
          Length = 648

 Score =  604 bits (1557), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 287/645 (44%), Positives = 426/645 (66%), Gaps = 16/645 (2%)

Query: 5   IKLTFPDGSIKNFPVHA-TGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEII 62
           +++  PDGS +++     T   +A SI + LAK A+A  +NG+  DL  PV  G+ + II
Sbjct: 2   VEIILPDGSSRSYDQETLTCGQIAASIGKGLAKAAIAGVVNGQKVDLDAPVPHGAQVAII 61

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T + P  L +IRHS +H+MA+AV++++P+ QV IGP IE+GFYYDFD E+PF+ D+L  I
Sbjct: 62  TEDSPEGLEIIRHSASHLMAQAVKTLFPQAQVTIGPAIENGFYYDFDYERPFTPDDLTAI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E  M+++  R+    ++ +  ++A   F++  E YK EI+ +IPA E+V+LY QGE+ DL
Sbjct: 122 ENCMRKLAKRNEKVERRVMPRDEAVAYFQAMGELYKAEIIGAIPAGEDVSLYSQGEFTDL 181

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG++K F K+MK  GAYWRGDS   ML RIYGTAW T+ +L  YL  +EE+E
Sbjct: 182 CRGPHVPSTGKLKAF-KVMKAGGAYWRGDSRNKMLQRIYGTAWATEADLKAYLTQMEEAE 240

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVL 300
           KRDHR++ +++DLF + ED G G++FWH +G +I + +  + + R ++  YE + TP + 
Sbjct: 241 KRDHRRIGKDLDLFSVQEDAGGGLVFWHPRGSRIRRVIEDFWKDRHVEAGYEFLYTPHIA 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ LW  SGH D Y  +MF+    D+     + + ++PMNCP H+ ++     SYRELP 
Sbjct: 301 NRQLWNTSGHTDFYSDSMFSPMEVDE-----QAYQIRPMNCPFHILIYKDRRHSYRELPF 355

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R  E G+VYR E SG+LHGL RVRGFTQDDAH+FCT++Q+  E  +I +L + I + +GF
Sbjct: 356 RWGELGTVYRYEMSGALHGLFRVRGFTQDDAHIFCTEQQIEEEIQRILDLTLDILRTYGF 415

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
               + LSTRPEK VGS A+WD A   ++  +      S+D ++  V  G GAFYGPK +
Sbjct: 416 SDFEINLSTRPEKSVGSAAIWDKATEALRRAI-----VSRD-LSYVVDEGGGAFYGPKID 469

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
             + D+IGR WQC T+Q+DFNLP RF+  Y+    E   P+MIHRA+ GS+ERF GI++E
Sbjct: 470 VKITDSIGRKWQCSTVQLDFNLPERFDMGYIGEDGESHRPIMIHRALMGSLERFFGILVE 529

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           ++ G  P+WL+P+QA+V +IT +   YA+ +   LK   L +E D RNE + YKIREH++
Sbjct: 530 HYAGWFPMWLAPVQAVVCSITDAQHAYAETVLAALKKAGLRVEIDLRNEKVGYKIREHTL 589

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           K++P +++ GDKE  E ++ +R     +   + + D +  L +E+
Sbjct: 590 KRVPYLLVVGDKEREEGTVNVRLRSGKSLGSLPIQDVVERLVEEA 634


>gi|77164649|ref|YP_343174.1| threonyl-tRNA synthetase, class IIA [Nitrosococcus oceani ATCC
           19707]
 gi|123757888|sp|Q3JC02|SYT_NITOC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|76882963|gb|ABA57644.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Nitrosococcus
           oceani ATCC 19707]
          Length = 644

 Score =  604 bits (1557), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 294/631 (46%), Positives = 419/631 (66%), Gaps = 15/631 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS ++F    T  DVA  I   LAK A+   I G++ D S P+ ++  + IIT  
Sbjct: 4   ITLPDGSQRSFDHPVTVYDVAADIGPGLAKAALGGKIEGRLVDSSYPLEKDTKLTIITER 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++A+AV++++PE QV IGP+IEDGFYYDF   + F+ ++L  IE K
Sbjct: 64  DMDGLEIIRHSCAHLLAQAVKALYPEAQVTIGPVIEDGFYYDFAYPKGFTPEDLEAIEAK 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+E++ +D    ++  S E+A  LF    E YK EI+ SIP++E ++LYRQG++ DLCRG
Sbjct: 124 MRELVEQDLSVHRELKSREEAVSLFRRMGEEYKAEIIASIPSEEEISLYRQGDFVDLCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV ST ++K F KL KVAGAYWRGD+N  ML RIYGTAW  ++ L  YL+ LEE+EKRD
Sbjct: 184 PHVPSTARLKAF-KLTKVAGAYWRGDANNEMLQRIYGTAWPDKKALKAYLHRLEEAEKRD 242

Query: 246 HRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQVLDQH 303
           HR++  ++DLF I E+ G G++FWH  G +I + +  +   R     YE + TP +  + 
Sbjct: 243 HRRIGADLDLFSIQEEAGGGLVFWHPMGARIRRVIEDFWQERHTAAGYEMLYTPHIAHEE 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LWQ SGH D YR +M+  +  +D   D + + LKPMNCP HV ++   L+SYRELP+R A
Sbjct: 303 LWQTSGHTDFYRESMY--QPMED---DHQLYQLKPMNCPFHVLIYQGRLRSYRELPIRWA 357

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           E G+VYR+E SG+LHGLMRVRGFTQDDAH+FC +EQ+ NE L I +L + +   FGF++ 
Sbjct: 358 ELGTVYRHEMSGALHGLMRVRGFTQDDAHIFCREEQIENEILGILDLTLEMLAAFGFDRY 417

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            + LSTRPEK VG +A+W+ A   ++  LD      +  ++  V  G GAFYGPK +  +
Sbjct: 418 EIDLSTRPEKSVGPEAIWEQATQALRSALD------KKGLDYAVDEGGGAFYGPKIDIKI 471

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +DAIGR WQC T+Q+DFNLP RF   YV     +  P+MIHRAV GS+ERF G++IE+++
Sbjct: 472 EDAIGRKWQCSTVQLDFNLPERFAMEYVAEDGARHRPIMIHRAVLGSLERFFGVLIEHYE 531

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+Q +V +IT     YA+++   +++       D RNE I +KIREH +++I
Sbjct: 532 GKFPPWLAPVQVVVMSITDRQEGYARQVEEAMRNKGFRSLLDLRNEKIGFKIREHILRRI 591

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           P +++ GD+E + +++ +R   S     +SL
Sbjct: 592 PYLLVIGDREVANQTVAVRTRYSQDLGAMSL 622


>gi|99035129|ref|ZP_01314912.1| hypothetical protein Wendoof_01000242 [Wolbachia endosymbiont of
           Drosophila willistoni TSC#14030-0811.24]
          Length = 536

 Score =  600 bits (1546), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 280/543 (51%), Positives = 386/543 (71%), Gaps = 13/543 (2%)

Query: 102 DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEI 161
           DGFYYDF  ++ F++D+L  IEKKM+EI+  +  F+++  + +++ + F    E YKV+I
Sbjct: 1   DGFYYDFATDRTFTTDDLTAIEKKMKEIVKSNHRFVREVWTRKQSVDFFSGIGEKYKVDI 60

Query: 162 LESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIY 221
           + SIP  EN+T+YRQG++ DLCRGPH  STG+VK F KLMKVAGAYWRGDS  PML RIY
Sbjct: 61  ISSIPEGENLTVYRQGDFVDLCRGPHSPSTGRVKAF-KLMKVAGAYWRGDSKGPMLQRIY 119

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLIS 281
           GTAW  + EL  YL  L+E+EKRDHRK+A++MDLFHI E+  G +FWH +G+ ++  L S
Sbjct: 120 GTAWGNKDELNAYLECLKEAEKRDHRKIAKDMDLFHIQEEAVGQVFWHEQGYILYNVLES 179

Query: 282 YMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
           Y+R+K I + Y E+ TP ++ + LW++SGHWD +R NMF V  +++     +  A+KPMN
Sbjct: 180 YIRKKLINNGYFEVKTPILVSKELWERSGHWDKFRENMFIVDESEN-----KKLAIKPMN 234

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
           CP HV +FN   +SYR+LP+R+AEFG+ +RNE SGSLHGLMRVRGFTQDDAH+FC +EQ+
Sbjct: 235 CPCHVQIFNSHTRSYRDLPIRMAEFGTCHRNESSGSLHGLMRVRGFTQDDAHIFCMEEQV 294

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQ 460
            +E +K  +L+  +Y + GF +I VK S RP+ R G+D +WD AE   K +L+ +K +  
Sbjct: 295 NSETIKFCDLLKEVYSELGFNEISVKFSDRPDIRAGNDEVWDRAE---KALLEAVKEAG- 350

Query: 461 DRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHP 520
             ++  +  GEGAFYGPK E++LKDAIGR+WQCGT+QVDF LP R  AFY+ +   K HP
Sbjct: 351 --LSYKLNPGEGAFYGPKLEFVLKDAIGRNWQCGTLQVDFILPERLGAFYIGADGHKHHP 408

Query: 521 VMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHL 580
           VM+HRA+ G+ ERFIGI+IEN+ G  P+WL+P Q  + TIT+ A  YA EI+N+LK   +
Sbjct: 409 VMLHRAILGTFERFIGILIENYAGKFPVWLAPTQLAILTITNEADGYATEISNILKEQGV 468

Query: 581 SIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
            ++TD  NE I+YKIR HS  K+PI+ I G  E + +++ +R  GS   +  SL  A   
Sbjct: 469 RVKTDLTNEKISYKIRLHSSNKVPILWIVGKNEVTSKTVSVRNLGSERQESFSLEKANES 528

Query: 641 LTK 643
           L K
Sbjct: 529 LLK 531


>gi|28211884|ref|NP_782828.1| threonyl-tRNA synthetase [Clostridium tetani E88]
 gi|73919782|sp|Q891T0|SYT_CLOTE RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|28204327|gb|AAO36765.1| threonyl-tRNA synthetase [Clostridium tetani E88]
          Length = 639

 Score =  598 bits (1542), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 305/642 (47%), Positives = 416/642 (64%), Gaps = 16/642 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           I +T  DG +         SD+   IS +L KKAV   ING++ +L   ++E S +EI+T
Sbjct: 2   INITLKDGKVIEVEKGVKVSDIVMKISPALYKKAVGAKINGEIAELMTEIKEDSELEILT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D      +RH+ +HI+A+AV+ ++PE ++AIGP I++GFYYDFD +  F+ + L +IE
Sbjct: 62  FDDEEGRKTVRHTSSHILAQAVKRLYPEAKLAIGPAIDNGFYYDFDIDFTFTPEMLEKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M +I+  +    +  L  E+A +L +   E YKVE++E +P  E ++ Y+QG++ DLC
Sbjct: 122 KEMAKIVKENLEIERFELPREEAIKLVKDASEPYKVELIEDLPEGEVISFYKQGDFVDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+ STG++K   KL+ VAGAYWRGD    ML RIYGTA+  + EL  YL  LEE+++
Sbjct: 182 AGPHLPSTGKIKAI-KLLSVAGAYWRGDEKNKMLQRIYGTAFLKKSELEAYLKMLEEAKR 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQ 302
           RDHRKL +E+DLF I E+G G  F+H KG  +   L ++ R K  K  Y+EI TP +L++
Sbjct: 241 RDHRKLGKELDLFTINEEGPGFPFFHPKGMVVRNILENFWREKHTKAGYDEIRTPVILNE 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW +SGHWD Y+ NM+  K       D   FA+KPMNCPG + V+   L SY+E P+RL
Sbjct: 301 ELWHRSGHWDHYKENMYFTKI------DNENFAIKPMNCPGSILVYKSHLHSYKEFPMRL 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            E G V+R+E SG+LHGLMRVR FTQDDAH+F TKEQ+ +E L +  LI S YK FGFE 
Sbjct: 355 GELGLVHRHELSGALHGLMRVRCFTQDDAHIFMTKEQIKDEILNVIKLIDSFYKVFGFE- 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +GSD  W+ A N +K  L+      + +IN G    +GAFYGPK ++ 
Sbjct: 414 YFVELSTRPEDSMGSDEDWEVATNGLKNALEGA--GLEYKINEG----DGAFYGPKIDFH 467

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LKD IGR WQCGTIQ+DF +P RF+  YV    EK  PVM+HR VFGSIERFIGI+IE+F
Sbjct: 468 LKDCIGRTWQCGTIQLDFQMPERFDLTYVGQDGEKHRPVMVHRVVFGSIERFIGILIEHF 527

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P+Q  V TIT S  +YA ++ N LK   + +E D RNE I YKIRE  ++K
Sbjct: 528 AGAFPTWLAPVQVKVMTITDSQKDYANKVVNDLKEKGIRVEFDDRNEKIGYKIREAQLQK 587

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P +II GDKE SE  + +R         +SL + +  L  E
Sbjct: 588 VPYMIILGDKEVSENKVAVRSRKEGDLGAISLKEFVAKLNYE 629


>gi|118444060|ref|YP_877833.1| threonyl-tRNA synthetase [Clostridium novyi NT]
 gi|166223336|sp|A0PZN1|SYT_CLONN RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|118134516|gb|ABK61560.1| threonyl-tRNA synthetase [Clostridium novyi NT]
          Length = 637

 Score =  598 bits (1541), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 301/643 (46%), Positives = 420/643 (65%), Gaps = 18/643 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           IK+T  DG +       T S++A  IS SL KKA+   ING+  +L D + E S +EI+T
Sbjct: 2   IKITLKDGKVLEVEKGLTVSEIAARISTSLRKKALGAKINGEKAELMDVINEDSTLEILT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            ED      +RH+ +HI+A+AV+ ++PEV++AIGP IE+GFYYDFD E  F+ + L +IE
Sbjct: 62  FEDQEGKDTLRHTASHILAQAVKRLYPEVKLAIGPSIENGFYYDFDAEFSFTPEILEKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M +I+  +    K   S E A    + + E YKVE++E +P +  ++ Y QG++ DLC
Sbjct: 122 KEMNKIVKENLQLKKFTKSREDAINFMKERNEDYKVELIEDLPEESIISFYEQGDFVDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPHV ST +VK   KL+ VAGAYWRG+ N  ML RIYGTA+  + EL +YL+ LEE++K
Sbjct: 182 AGPHVPSTKEVKAI-KLLSVAGAYWRGNENNKMLQRIYGTAFTKKAELEEYLHMLEEAKK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           RDHRKL +E+ LF + E+G G  F++ KG  +  TL +Y R    K  Y EI TP +L++
Sbjct: 241 RDHRKLGKELGLFDLKEEGPGFPFFYPKGMILRNTLENYWREMHEKAGYGEIRTPIILNE 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW QSGHWD Y+ NM+  K       D   +A+KPMNCPG + V+   L SYRELP+RL
Sbjct: 301 KLWHQSGHWDHYKENMYFTKI------DGEDYAIKPMNCPGSILVYKSDLHSYRELPIRL 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            E G V+R+E SG+LHGLMRVR FTQDDAH+F TKEQ+ +E L +  +I + Y  FGFE 
Sbjct: 355 GELGLVHRHEYSGALHGLMRVRNFTQDDAHIFMTKEQITSEILGVIKMIDNFYSLFGFE- 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD-RINTGVLLGEGAFYGPKFEY 481
             V+LSTRPE  +GSD  W+ A N   G++  +  +  + +IN G    +GAFYGPK ++
Sbjct: 414 YFVELSTRPEDSMGSDEDWEAATN---GLIKALNEAGLEYKINEG----DGAFYGPKIDF 466

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L+D +GR WQCGTIQ+DF +P RF+  YV +  EK  PVM HR +FGSIERFIGI+ E+
Sbjct: 467 HLRDCLGRTWQCGTIQLDFQMPERFDLSYVGADGEKHRPVMAHRVIFGSIERFIGILTEH 526

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  P WL+P+Q  +  IT + VEY +EI  +L  + + +E D RNE I YKIRE  ++
Sbjct: 527 YAGAFPTWLAPVQVKIMNITDNQVEYCKEIQKVLNENGIRVELDLRNEKIGYKIREAQLQ 586

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIP +++ GDKE +E++I +R         ++L D + ++ KE
Sbjct: 587 KIPYMLVLGDKEMNEKTIAVRARKQGDLGAMNLTDFVAMVKKE 629


>gi|260891090|ref|ZP_05902353.1| threonine--tRNA ligase [Leptotrichia hofstadii F0254]
 gi|260859117|gb|EEX73617.1| threonine--tRNA ligase [Leptotrichia hofstadii F0254]
          Length = 636

 Score =  597 bits (1540), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 305/647 (47%), Positives = 433/647 (66%), Gaps = 18/647 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I++  PDGS +      T  + A+SI  SL K  V   I+G   D S  + + G+IEIIT
Sbjct: 2   IEMILPDGSKRQLENPMTVVEFAKSIGSSLGKATVGAIIDGVQVDPSHIIDKSGTIEIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
               + + +IRHS AHIMA+AVQ ++P  +V IGP+IE+GF+YDFD E+PF+ ++LA+IE
Sbjct: 62  NTSEKGIEIIRHSAAHIMAQAVQRLFPNTKVTIGPVIENGFFYDFDPEKPFTEEDLAKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           ++M +I+  +  F +  ++ E+A++ F  K E YKVEI+E + A + V++Y+QGE+ DLC
Sbjct: 122 EEMTKIVKENYEFKRSEMTAEEAKKFFAEKGETYKVEIIEDLGA-DKVSIYQQGEFIDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RG H+ STG +K F KLM  AGAYWRGDSN  ML RIYG A+ T++EL  YL  +EE+EK
Sbjct: 181 RGTHIPSTGYLKAF-KLMSTAGAYWRGDSNNKMLQRIYGVAFATKKELDDYLTMMEEAEK 239

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQ 302
           RDHRKL +++DLF + E G G  F+  KG ++F  L    R    K  Y+EI TP +LD+
Sbjct: 240 RDHRKLGKQLDLFFVDEHGPGFPFFMPKGVELFNKLQEIWRVEHKKRGYQEIKTPIMLDK 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW +YR NM+       TI D + +A+KPMNCPG +  + + L SY++LP++ 
Sbjct: 300 ELWEISGHWFNYRENMYT-----STI-DEKEYAIKPMNCPGSIIAYKNNLHSYKDLPLKY 353

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            E G V+R+E SG+LHGLMRVR FTQDDAHVFCTKEQ+  + ++I +L    Y  FGFE 
Sbjct: 354 GEMGLVHRHEFSGALHGLMRVRAFTQDDAHVFCTKEQIEEQIIEIIDLYDKFYTVFGFE- 412

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             ++LST+P+K +GSD +W+ AE  +K  L+         IN  +  G+GAFYGPK ++ 
Sbjct: 413 YHIELSTKPDKAIGSDEIWEMAEANLKSALE------HKGINYKLNPGDGAFYGPKIDFK 466

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KD+IGR WQCGTIQ+DFNLP+RF   Y+ +  EK  PVMIHRA++GS+ERFIGI+IE++
Sbjct: 467 MKDSIGRIWQCGTIQLDFNLPARFEMSYIGADGEKHEPVMIHRAMYGSLERFIGILIEHY 526

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE-HSIK 601
            G  P WL+P+QA + TI+   V +A+E+   L+   + +E D R E I YKIRE +  +
Sbjct: 527 AGAFPTWLAPVQARILTISDEQVPFAKELFTKLQDAGIRVELDTRVEKIGYKIREANGDQ 586

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
           KIP+ +I G  E +   + +RRFGS  ++ +S+ + I  L +ES  P
Sbjct: 587 KIPVQLIIGKNEVANNEVNVRRFGSQDSKNISVDEIIKTLKQESFVP 633


>gi|257124962|ref|YP_003163076.1| threonyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
 gi|257048901|gb|ACV38085.1| threonyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
          Length = 636

 Score =  597 bits (1539), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 306/647 (47%), Positives = 433/647 (66%), Gaps = 18/647 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I++  PDGS +      T  + A+SI  SL K  V   I+G   D S  + + G+IEIIT
Sbjct: 2   IEMILPDGSKRQLENPMTVVEFAKSIGSSLGKATVGAIIDGVQVDPSHIIDKSGTIEIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
               + + +IRHS AHIMA+AVQ ++P  +V IGP+IE+GF+YDFD E+PF+ ++LA+IE
Sbjct: 62  NTSEKGIEIIRHSAAHIMAQAVQRLFPNTKVTIGPVIENGFFYDFDPEKPFTEEDLAKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M +I+  +  F +  ++ E+A++ F  K E YKVEI+E + A + V++Y+QGE+ DLC
Sbjct: 122 GEMAKIVKENYEFKRSEMTAEEAKKFFAEKGETYKVEIIEDLGA-DKVSIYQQGEFIDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RG H+ STG +K F KLM  AGAYWRGDSN  ML RIYG A+ T++EL  YL  +EE+EK
Sbjct: 181 RGTHIPSTGYLKAF-KLMSTAGAYWRGDSNNKMLQRIYGVAFATKKELDDYLTMMEEAEK 239

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQ 302
           RDHRKL +++DLF + E G G  F+  KG ++F  L    R    K  Y+EI TP +LD+
Sbjct: 240 RDHRKLGKQLDLFFVDEHGPGFPFFMPKGVELFNKLQEIWRVEHKKRGYQEIKTPIMLDK 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW +YR NM+       TI D + +A+KPMNCPG +  + + L SY++LP++ 
Sbjct: 300 ELWEISGHWFNYRENMYT-----STI-DEKEYAIKPMNCPGSIIAYKNNLHSYKDLPLKY 353

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            E G V+R+E SG+LHGLMRVR FTQDDAHVFCTKEQ+  + ++I +L    Y  FGFE 
Sbjct: 354 GEMGLVHRHEFSGALHGLMRVRAFTQDDAHVFCTKEQIEEQIIEIIDLYDKFYTVFGFE- 412

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             ++LST+P+K +GSD +W+ AE  +K  L+         IN  +  G+GAFYGPK ++ 
Sbjct: 413 YHIELSTKPDKAIGSDEIWEMAEANLKSALE------HKGINYKLNPGDGAFYGPKIDFK 466

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KD+IGR WQCGTIQ+DFNLP+RF   Y+ +  EK  PVMIHRA++GS+ERFIGI+IE++
Sbjct: 467 MKDSIGRIWQCGTIQLDFNLPARFEMSYIGADGEKHEPVMIHRAMYGSLERFIGILIEHY 526

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE-HSIK 601
            G  P WL+P+QA + TI+   V +A+E+   L+   + +E D R E I YKIRE + ++
Sbjct: 527 AGAFPTWLAPVQARILTISDEQVPFAKELFIKLQDAGIRVELDTRVEKIGYKIREANGVQ 586

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
           KIP+ +I G  E +   + +RRFGS  ++ VS+ + I  L +ES  P
Sbjct: 587 KIPVQLIIGKNEVANNEVNVRRFGSQDSKNVSVDEIIETLKQESHVP 633


>gi|220934623|ref|YP_002513522.1| threonyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7]
 gi|259516780|sp|B8GRI1|SYT_THISH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|219995933|gb|ACL72535.1| threonyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7]
          Length = 643

 Score =  597 bits (1538), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 289/619 (46%), Positives = 415/619 (67%), Gaps = 15/619 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPE 65
           +T PDGS + F    T  DVA  I   LAK A+A  +NG++ D S  + +  S+ IIT  
Sbjct: 4   ITLPDGSERRFDAPVTVRDVAADIGAGLAKAALAGRVNGRLVDTSHLIEDDASLAIITDR 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           DP  L VIRHS AH++A+AV+ ++P  QV IGP+I++GFYYDF  E+PF  D+L +IE +
Sbjct: 64  DPEGLEVIRHSTAHLLAQAVKDLFPSAQVTIGPVIDNGFYYDFAFERPFHPDDLEKIEAR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+E+   D P  +  +  ++A + F  + E YK +I+  IPA E ++LY+QGE+ DLCRG
Sbjct: 124 MKELAKADLPVSRSVMDRDEAVDFFRDQGEEYKAQIIADIPAGETISLYKQGEFIDLCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV STG++K F KL KVAGAYWRGDS+  ML RIYGTAW  +Q+L  YL+ L E+E+RD
Sbjct: 184 PHVPSTGKLKAF-KLTKVAGAYWRGDSSNEMLQRIYGTAWPNKQQLDDYLHRLAEAERRD 242

Query: 246 HRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQVLDQH 303
           HR++  E++LF I ED G G++FWH KG +I + +  +      +  Y+ + TP + +  
Sbjct: 243 HRRIGTELNLFSIQEDAGGGLVFWHPKGARIRRAIEQFWFDMHERAGYQFLYTPHIANLD 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+ SGH D Y  +M+     D+     + F LKPMNCP HV V+   L SYR+LP+R A
Sbjct: 303 LWKTSGHADFYSESMYEPMEDDN-----QAFQLKPMNCPFHVLVYKDRLHSYRDLPLRWA 357

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           E G+VYR E SG+LHGLMRVRGFTQDDAH+FC ++Q+  E L+I +L + + + FGF+  
Sbjct: 358 EMGTVYRREMSGALHGLMRVRGFTQDDAHIFCREDQIEAEILRILDLTLEVLQAFGFDDF 417

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            V LSTRP+K VGSD +W+ A   +K  L+      +  ++  V  G GAFYGPK +  +
Sbjct: 418 DVNLSTRPDKAVGSDQIWEHATAALKAALE------KKGLDYSVDEGGGAFYGPKIDIKI 471

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +DAIGR+WQC T+Q+DFNLP RF   YV   + +  P+MIHRA+ GS+ERF G++IE++ 
Sbjct: 472 RDAIGREWQCSTVQLDFNLPERFEMEYVAEDNSRRRPIMIHRALLGSVERFFGVLIEHYA 531

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G+ PLWL+P+Q  V TIT    +YA+E+A+ L++  +  + D RNE I +KIREH+++++
Sbjct: 532 GSFPLWLAPVQVQVLTITDRQDDYAREVADRLRNRGIRADADLRNEKIGFKIREHTLQRV 591

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++ GD+E    ++ +R
Sbjct: 592 PYLLVLGDREMETNTVAVR 610


>gi|15895629|ref|NP_348978.1| threonyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|22654130|sp|Q97GK4|SYT_CLOAB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|15025373|gb|AAK80318.1|AE007736_8 Threonyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|325509777|gb|ADZ21413.1| threonyl-tRNA synthetase [Clostridium acetobutylicum EA 2018]
          Length = 637

 Score =  597 bits (1538), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 300/620 (48%), Positives = 411/620 (66%), Gaps = 16/620 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           IK+T  DG +  F    T  DVA++IS  L KKA++  INGK  +L   + ++ ++EI+T
Sbjct: 2   IKVTLKDGKVMEFENTTTPGDVAKAISPGLYKKAISAKINGKRAELMTNIDKDCNLEILT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D      +RH+ +HI+A+A++ ++PE ++AIGP I+ GFYYD D +  F+ +  A+IE
Sbjct: 62  FDDEDGKWTLRHTASHILAQAIKRLYPEAKLAIGPAIDSGFYYDIDADFSFTEEMFAKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M +II  +    +  L  EKA E  E KKE YKVE+++ +P    ++ Y+QGE+ DLC
Sbjct: 122 KEMNKIIKENLKLERFELPREKAIEYMEEKKEPYKVELIKDLPEDAVISFYKQGEFVDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPHV ST +VK   KLM VAGAYWRG+    ML RIYGTA+  + +L  Y+  LEE++K
Sbjct: 182 AGPHVESTAKVK-VIKLMSVAGAYWRGNEKNKMLQRIYGTAFTKKADLDDYINMLEEAKK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           RDHRK+ +E+DLF + E+G G  F+H KG  +   L++Y R    K  Y+EI+TP +L++
Sbjct: 241 RDHRKIGKELDLFTMHEEGPGFPFFHPKGMVLKNLLLNYWREVHDKAGYDEISTPIILNE 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW QSGHWD Y+ NM+  K       D   +A+KPMNCPG + V+   + SYRELP++L
Sbjct: 301 ALWHQSGHWDHYKENMYFTKI------DEADYAIKPMNCPGSILVYKDNIHSYRELPIKL 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AE G V+R+E SG+LHGLMRVR F QDDAH+F TKEQ+  E L +  LI S YK FGFE 
Sbjct: 355 AEIGLVHRHEKSGALHGLMRVRCFNQDDAHIFMTKEQITEEILGVIKLIDSFYKVFGFE- 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +GSD  W+ A N   G+++ +  ++ + I   V  G+GAFYGPK ++ 
Sbjct: 414 YYVELSTRPEDSMGSDEDWEAATN---GLINALNAANLEYI---VNEGDGAFYGPKIDFH 467

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LKD IGR WQCGTIQ+DF +P RF+  Y+ +  EK  PVM+HR VFGSIERFIGI+IE++
Sbjct: 468 LKDCIGRTWQCGTIQLDFQMPERFDINYIGADGEKHRPVMVHRVVFGSIERFIGILIEHY 527

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P+Q  V  IT S VEY   I+  LK   + +E D RNE I YKIRE  +KK
Sbjct: 528 AGAFPTWLAPVQVKVMNITDSQVEYVDAISEKLKEAGIRVEKDVRNEKIGYKIREAQLKK 587

Query: 603 IPIIIICGDKEASERSIGIR 622
           +P +I+ GDKE  E  I +R
Sbjct: 588 VPYMIVIGDKEIKEGIISVR 607


>gi|219681500|ref|YP_002467885.1| threonyl-tRNA synthetase [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|257471181|ref|ZP_05635180.1| threonyl-tRNA synthetase [Buchnera aphidicola str. LSR1
           (Acyrthosiphon pisum)]
 gi|254783512|sp|B8D8S6|SYT_BUCA5 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|219624343|gb|ACL30498.1| threonyl-tRNA synthetase [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
          Length = 642

 Score =  597 bits (1538), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 282/622 (45%), Positives = 427/622 (68%), Gaps = 22/622 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPE 65
           + F DGS + +    +  ++ ++   S+ K  +A+++N    +L+  +RE + IE +  +
Sbjct: 4   IRFYDGSQQVYEHSVSLIEIIKNKKPSIMKSLIAISVNNHFSNLNTFIREDAFIEFVDQK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           + ++L +IR+SCA +++ A+++IWP  Q+A   IIEDGFY D D ++  S  +L  +E +
Sbjct: 64  NYKALNIIRYSCAQLLSYAIKNIWPLAQIATSNIIEDGFYCDIDFKRSISEKDLILLENQ 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M+ ++ R+   L + +S+ +ARE+F+   E YKV ++ E+I     V+LY    + D+  
Sbjct: 124 MKTLVKREYNILNKLISYSEAREIFQKCFEKYKVSLIDENINCNSKVSLYYHENYADIDI 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           G  V +  +  K+FKL K+ G YW+ + N  ML RIYGTAW  +QEL ++L +L E EKR
Sbjct: 184 GLQVFNI-KFCKYFKLQKIGGVYWKKNKNNKMLQRIYGTAWTNKQELDKHLDYLNELEKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ + + L+H+ E+  G+IFWH KGW IF  L +++R K+K+  YEE+ TP ++D+ 
Sbjct: 243 DHRKIGKFLQLYHMQEESPGMIFWHNKGWIIFNELQNFVRVKLKEYKYEEVKTPLLIDKL 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           +W+QSGHWD+Y+  +F       T+ + R + +KPMNCPGHV +FN  LKSYR+LP+R+A
Sbjct: 303 IWKQSGHWDNYKNAIFT------TLSEHREYCIKPMNCPGHVQIFNSRLKSYRDLPIRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM---FNECLKIHNLIISIYKDFGF 420
           EFGS +RNEPSGSLHGLMRVR FTQDDAH+FCT+EQ+    N+C+K   +I  +Y  F F
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRNFTQDDAHIFCTREQVRSEINDCIK---MIYDLYSTFHF 413

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           +KI+VKLSTRPEKR+G+D+LW+++E  +  +L       ++ ++     GEGAFYGPK E
Sbjct: 414 KKILVKLSTRPEKRIGTDSLWNESEKDLSDML------IENHLSFEYQSGEGAFYGPKIE 467

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           +IL+D++ R+WQCGTIQ+DF LP R ++FY+N  +EK  PV+IHRA+ GSIERFIGI+IE
Sbjct: 468 FILQDSLDRNWQCGTIQLDFYLPLRLSSFYINEKNEKKVPVIIHRAILGSIERFIGILIE 527

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              GNLP WLSP+Q ++ +IT  +  Y +E+       ++ IE D RNE I +KIREH++
Sbjct: 528 ECSGNLPTWLSPVQVVIISITDISSGYVKELFKKFSDVNIRIECDLRNEKIGFKIREHTL 587

Query: 601 KKIPIIIICGDKEASERSIGIR 622
           ++IP I+ICG+KE+S + I +R
Sbjct: 588 RRIPYILICGEKESSSKKISVR 609


>gi|219682056|ref|YP_002468440.1| threonyl-tRNA synthetase [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|254783513|sp|B8D730|SYT_BUCAT RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|219621789|gb|ACL29945.1| threonyl-tRNA synthetase [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|311085869|gb|ADP65951.1| threonyl-tRNA synthetase [Buchnera aphidicola str. LL01
           (Acyrthosiphon pisum)]
 gi|311086439|gb|ADP66520.1| threonyl-tRNA synthetase [Buchnera aphidicola str. TLW03
           (Acyrthosiphon pisum)]
 gi|311087022|gb|ADP67102.1| threonyl-tRNA synthetase [Buchnera aphidicola str. JF99
           (Acyrthosiphon pisum)]
 gi|311087587|gb|ADP67666.1| threonyl-tRNA synthetase [Buchnera aphidicola str. JF98
           (Acyrthosiphon pisum)]
          Length = 642

 Score =  596 bits (1537), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 282/622 (45%), Positives = 427/622 (68%), Gaps = 22/622 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPE 65
           + F DGS + +    +  ++ ++   S+ K  +A+++N    +L+  +RE + IE +  +
Sbjct: 4   IRFYDGSQQVYEHSVSLIEIIKNKKPSIMKSLIAISVNNHFSNLNTFIREDAFIEFVDQK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           + ++L +IR+SCA +++ A+++IWP  Q+A   IIEDGFY D D ++  S  +L  +E +
Sbjct: 64  NYKALNIIRYSCAQLLSYAIKNIWPLAQIATSNIIEDGFYCDIDFKRSISEKDLILLENQ 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M+ ++ R+   L + +S+ +ARE+F+   E YKV ++ E+I     V+LY    + D+  
Sbjct: 124 MKTLVKREYNILNKLISYSEAREIFQKCFEKYKVSLIDENIHCNSKVSLYYHENYADIDI 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           G  V +  +  K+FKL K+ G YW+ + N  ML RIYGTAW  +QEL ++L +L E EKR
Sbjct: 184 GLQVFNI-KFCKYFKLQKIGGVYWKKNKNNKMLQRIYGTAWTNKQELDKHLDYLNELEKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ + + L+H+ E+  G+IFWH KGW IF  L +++R K+K+  YEE+ TP ++D+ 
Sbjct: 243 DHRKIGKFLQLYHMQEESPGMIFWHNKGWIIFNELQNFVRVKLKEYKYEEVKTPLLIDKL 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           +W+QSGHWD+Y+  +F       T+ + R + +KPMNCPGHV +FN  LKSYR+LP+R+A
Sbjct: 303 IWKQSGHWDNYKNAIFT------TLSEHREYCIKPMNCPGHVQIFNSRLKSYRDLPIRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM---FNECLKIHNLIISIYKDFGF 420
           EFGS +RNEPSGSLHGLMRVR FTQDDAH+FCT+EQ+    N+C+K   +I  +Y  F F
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRNFTQDDAHIFCTREQVRSEINDCIK---MIYDLYSTFHF 413

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           +KI+VKLSTRPEKR+G+D+LW+++E  +  +L       ++ ++     GEGAFYGPK E
Sbjct: 414 KKILVKLSTRPEKRIGTDSLWNESEKDLSDML------IENHLSFEYQSGEGAFYGPKIE 467

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           +IL+D++ R+WQCGTIQ+DF LP R ++FY+N  +EK  PV+IHRA+ GSIERFIGI+IE
Sbjct: 468 FILQDSLDRNWQCGTIQLDFYLPLRLSSFYINEKNEKKVPVIIHRAILGSIERFIGILIE 527

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              GNLP WLSP+Q ++ +IT  +  Y +E+       ++ IE D RNE I +KIREH++
Sbjct: 528 ECSGNLPTWLSPVQVVIISITDISSGYVKELFKKFSDVNIRIECDLRNEKIGFKIREHTL 587

Query: 601 KKIPIIIICGDKEASERSIGIR 622
           ++IP I+ICG+KE+S + I +R
Sbjct: 588 RRIPYILICGEKESSSKKISVR 609


>gi|15616745|ref|NP_239957.1| threonyl-tRNA synthetase [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|11134938|sp|P57225|SYT_BUCAI RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|25292947|pir||C84944 threonine-tRNA ligase (EC 6.1.1.3) [imported] - Buchnera sp.
           (strain APS)
 gi|10038808|dbj|BAB12843.1| threonyl-tRNA synthetase [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
          Length = 642

 Score =  596 bits (1537), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 282/622 (45%), Positives = 427/622 (68%), Gaps = 22/622 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPE 65
           + F DGS + +    +  ++ ++   S+ K  +A+++N    +L+  +RE + IE +  +
Sbjct: 4   IRFYDGSQQVYEHSVSLIEIIKNKKPSIMKSLIAISVNNHFSNLNTFIREDAFIEFVDQK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           + ++L +IR+SCA +++ A+++IWP  Q+A   IIEDGFY D D ++  S  +L  +E +
Sbjct: 64  NYKALNIIRYSCAQLLSYAIKNIWPLAQIATSNIIEDGFYCDIDFKRSISEKDLILLENQ 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M+ ++ R+   L + +S+ +ARE+F+   E YKV ++ E+I     V+LY    + D+  
Sbjct: 124 MKMLVKREYNILNKLISYSEAREIFQKCFEKYKVSLIDENINCNSKVSLYYHENYADIDI 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           G  V +  +  K+FKL K+ G YW+ + N  ML RIYGTAW  +QEL ++L +L E EKR
Sbjct: 184 GLQVFNI-KFCKYFKLQKIGGVYWKKNKNNKMLQRIYGTAWTNKQELDKHLDYLNELEKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ + + L+H+ E+  G+IFWH KGW IF  L +++R K+K+  YEE+ TP ++D+ 
Sbjct: 243 DHRKIGKFLQLYHMQEESPGMIFWHNKGWIIFNELQNFVRVKLKEYKYEEVKTPLLIDKL 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           +W+QSGHWD+Y+  +F       T+ + R + +KPMNCPGHV +FN  LKSYR+LP+R+A
Sbjct: 303 IWKQSGHWDNYKNAIFT------TLSEHREYCIKPMNCPGHVQIFNSRLKSYRDLPIRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM---FNECLKIHNLIISIYKDFGF 420
           EFGS +RNEPSGSLHGLMRVR FTQDDAH+FCT+EQ+    N+C+K   +I  +Y  F F
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRNFTQDDAHIFCTREQVRSEINDCIK---MIYDLYSTFHF 413

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           +KI+VKLSTRPEKR+G+D+LW+++E  +  +L       ++ ++     GEGAFYGPK E
Sbjct: 414 KKILVKLSTRPEKRIGTDSLWNESEKDLSDML------IENHLSFEYQSGEGAFYGPKIE 467

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           +IL+D++ R+WQCGTIQ+DF LP R ++FY+N  +EK  PV+IHRA+ GSIERFIGI+IE
Sbjct: 468 FILQDSLDRNWQCGTIQLDFYLPLRLSSFYINEKNEKKVPVIIHRAILGSIERFIGILIE 527

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              GNLP WLSP+Q ++ +IT  +  Y +E+       ++ IE D RNE I +KIREH++
Sbjct: 528 ECSGNLPTWLSPVQVVIISITDISSGYVKELFKKFSDVNIRIECDLRNEKIGFKIREHTL 587

Query: 601 KKIPIIIICGDKEASERSIGIR 622
           ++IP I+ICG+KE+S + I +R
Sbjct: 588 RRIPYILICGEKESSSKKISVR 609


>gi|238927112|ref|ZP_04658872.1| threonine--tRNA ligase [Selenomonas flueggei ATCC 43531]
 gi|238885092|gb|EEQ48730.1| threonine--tRNA ligase [Selenomonas flueggei ATCC 43531]
          Length = 639

 Score =  596 bits (1536), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 294/641 (45%), Positives = 418/641 (65%), Gaps = 18/641 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +KLT PDGS++      T  DV + +S SLAKKA+A +++G+V DL+ PV ++ ++ ++T
Sbjct: 2   VKLTLPDGSVREAEAGTTILDVVKGMSNSLAKKALAASLDGEVVDLTTPVTKDAALRVLT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPE--VQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
            ED      +RH+ AH+MA+AV+ ++PE  VQ+AIGP IE+GFYYDFD E   +  +L +
Sbjct: 62  FEDEGGRHALRHTAAHVMAQAVKRLYPESNVQLAIGPAIENGFYYDFDMEHQLTDADLHE 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK+M++I+  + P +++ +S   A  LF  K E YKVE++E +P    ++LY QGE+ D
Sbjct: 122 IEKEMKKIVKENFPLVRREISRADAIALFREKGENYKVELIEDLPENAVISLYTQGEFTD 181

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LC GPHV STG+VK F KL  VAGAYWRG     ML RIYGTA+  Q+EL  YL+ LEE+
Sbjct: 182 LCAGPHVASTGKVKAF-KLQSVAGAYWRGSEKNKMLQRIYGTAFEKQEELDAYLHMLEEA 240

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
            KRDHRKL +E+DLF + E+G G  F+H  G  +   L+ Y R    +  Y+EI+TP +L
Sbjct: 241 AKRDHRKLGKELDLFSLHEEGPGFPFFHPNGMALRNALLDYWREVHRRYGYQEISTPVIL 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            + LW+ SGHW  YR NM+  +  D+       +A+KPMNCPG + V+   L SYR+LP+
Sbjct: 301 SRKLWETSGHWFHYRENMYTTEIDDED------YAIKPMNCPGCMLVYRSQLHSYRDLPL 354

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLAE G V+R+E SG+LHGL RVR FTQDDAH+F T +Q+  E     +L   +Y+ FG 
Sbjct: 355 RLAELGLVHRHELSGALHGLFRVRNFTQDDAHLFVTPDQIEGEIQHTIDLFDEVYRTFGL 414

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
                +LSTRPE  +G+D +W+ A N ++  LD   N   D +   V  G+GAFYGPK +
Sbjct: 415 -TYKAELSTRPEDSMGTDEMWELATNGLQKALD---NRGLDYV---VNEGDGAFYGPKID 467

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           + L+D+IGR WQCGTIQ+D +LP +F+  YV    EK  PVM+HR V+GSIERFIGI+IE
Sbjct: 468 FHLRDSIGRTWQCGTIQLDMSLPEKFDLTYVGEDGEKHRPVMLHRVVYGSIERFIGILIE 527

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           N+ G  P+W++P+Q  +  IT    EYA+++   +    + +E D RNE   YKIRE  +
Sbjct: 528 NYAGAFPVWMAPVQVRILPITERHAEYAEKLYKKMFDCGIRVEIDERNEKTGYKIRESQV 587

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           KK P  I+ GD+E    ++ +R++G   +  +S  D I ++
Sbjct: 588 KKTPYTIVVGDQEQESGTVAMRKYGEKNSTTMSSDDFIALV 628


>gi|253682125|ref|ZP_04862922.1| threonine--tRNA ligase [Clostridium botulinum D str. 1873]
 gi|253561837|gb|EES91289.1| threonine--tRNA ligase [Clostridium botulinum D str. 1873]
          Length = 637

 Score =  596 bits (1536), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 298/643 (46%), Positives = 421/643 (65%), Gaps = 18/643 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           IK+T  DG +       T S++A  IS SL KKA+   ING+  +L D + +  S+EI+T
Sbjct: 2   IKITLKDGKVLEMEKGLTVSEIAARISTSLRKKALGAKINGEKGELMDVINDDCSLEILT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            ED      +RH+ +HI+A+AV+ ++P+V++AIGP IE+GFYYDFD E  F+ + L +IE
Sbjct: 62  FEDQEGKDTLRHTASHILAQAVKRLYPDVKLAIGPSIENGFYYDFDAEFSFTPEILEKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M +I+  +    K  L  ++A +  + + E YKVE++E +P    ++ Y +GE+ DLC
Sbjct: 122 KEMNKIVKENLELKKFTLPRDEAIKFMKERNEDYKVELIEDLPEDAVISFYEEGEFVDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPHV ST +VK   KL+ VAGAYWRG+ N  ML RIYGTA+  + +L QYL+ LEE++K
Sbjct: 182 AGPHVPSTKEVKAI-KLLSVAGAYWRGNENNKMLQRIYGTAFTKKADLEQYLHMLEEAKK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           RDHRKL +E+ LF + E+G G  F++ KG  +  TL +Y R    K  Y EI TP +L++
Sbjct: 241 RDHRKLGKELGLFDLKEEGPGFPFFYPKGMTLRNTLENYWREMHEKAGYGEIRTPIILNE 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
           +LW QSGHWD Y+ NM+  K       D   +A+KPMNCPG + V+   L SYRELP+RL
Sbjct: 301 NLWHQSGHWDHYKENMYFTKI------DGEDYAIKPMNCPGSILVYKSDLHSYRELPIRL 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            E G V+R+E SG+LHGLMRVR FTQDDAH+F TKEQ+ +E L +  +I + Y  FGFE 
Sbjct: 355 GELGLVHRHEYSGALHGLMRVRNFTQDDAHIFMTKEQITSEILGVIKMIDNFYSLFGFE- 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD-RINTGVLLGEGAFYGPKFEY 481
             V+LSTRPE  +GSD  W+ A N   G++  +  +  + +IN G    +GAFYGPK ++
Sbjct: 414 YFVELSTRPEDSMGSDEDWEAATN---GLVKALNEAGLEYKINEG----DGAFYGPKIDF 466

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L+D +GR WQCGTIQ+DF +P RF+  YV +  EK  PVM HR +FGSIERFIGI+ E+
Sbjct: 467 HLRDCLGRTWQCGTIQLDFQMPERFDLSYVGADGEKHRPVMAHRVIFGSIERFIGILTEH 526

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  P WL+P+Q  +  IT + +EY +EI   LK + + +E D RNE I YKIRE  ++
Sbjct: 527 YAGAFPTWLAPVQVKIMNITDNQIEYCKEIEKTLKENGIRVELDLRNEKIGYKIREAQLQ 586

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIP +++ GDKE +E +I +R         + L+D + ++ KE
Sbjct: 587 KIPYMLVLGDKEMNENTIAVRSRKQGDLGAMQLVDFVAMVKKE 629


>gi|88608148|ref|YP_506185.1| threonyl-tRNA synthetase [Neorickettsia sennetsu str. Miyayama]
 gi|123763729|sp|Q2GEB1|SYT_NEOSM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|88600317|gb|ABD45785.1| threonyl-tRNA synthetase [Neorickettsia sennetsu str. Miyayama]
          Length = 637

 Score =  595 bits (1535), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 281/625 (44%), Positives = 408/625 (65%), Gaps = 15/625 (2%)

Query: 22  TGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHI 80
           T   V       +  K +A ++NG   DLS  +  + +IE I  E    + ++RH CAH+
Sbjct: 22  TVGSVISDFDAEIFSKTIAASVNGVSVDLSYRLDCDANIEPILLESEAGIEILRHDCAHV 81

Query: 81  MAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQY 140
           MA+AVQ ++PE ++ IGP+I+DGFYYDF     FS  +  +IE+K++EII R+   +++ 
Sbjct: 82  MAQAVQELYPETKLGIGPVIDDGFYYDFSTPIAFSDSDFEKIEEKIREIIQRNYRIIREE 141

Query: 141 LSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKL 200
            S + A   F+ K E YKVE++  IP +E +++Y+QG++ DLCRGPH  STG +K F KL
Sbjct: 142 WSRDDAVSFFQKKGEKYKVELISRIPPEEKISIYKQGDFIDLCRGPHAPSTGWLKHF-KL 200

Query: 201 MKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAE 260
           +KV+ AYW GD+    L RIYGTAW T+  L  YL FL E++KRDHR + + M+LFH+ E
Sbjct: 201 LKVSTAYWLGDAKSDSLQRIYGTAWATKDGLEAYLSFLHEAKKRDHRAIGKTMELFHLQE 260

Query: 261 DGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMF 319
           +  G +FWH  G+ +++ L +Y+R K+K   Y E+ TP V ++ LW++SGHW  ++ NMF
Sbjct: 261 EAQGQVFWHENGFILYRVLENYIRNKLKTHGYREVKTPLVYNKCLWERSGHWSKFKENMF 320

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHG 379
            ++  D        F+LKPMNCP H+ V+   LKSYR+LP+RLAEFG  +RNE SG+LHG
Sbjct: 321 VIRSDDGE------FSLKPMNCPAHIEVYKQSLKSYRDLPLRLAEFGMCHRNEASGALHG 374

Query: 380 LMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDA 439
           LMRVRGF QDDAH+FCT +Q+ +E +    L+  +Y+D GF ++ V+ S RPE R+G+D 
Sbjct: 375 LMRVRGFVQDDAHIFCTPQQICDETIAFCGLLKEVYRDLGFTEVEVRFSDRPEVRLGNDE 434

Query: 440 LWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVD 499
            WD AE  +K  +D  K      +N G    EGAFYGPK E++L DA+ R WQCGT+QVD
Sbjct: 435 TWDKAEIALKSAMD--KAGLIYTLNPG----EGAFYGPKIEFVLVDALKRKWQCGTLQVD 488

Query: 500 FNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTT 559
           F LP R +A Y++   +K HPVM+HRA+ G+ ERF+GI+IE++ G  PLWL+P Q  V T
Sbjct: 489 FVLPERLDATYIDHEGKKQHPVMLHRAILGTFERFLGILIEHYDGKFPLWLAPTQVAVLT 548

Query: 560 ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSI 619
           IT    EYA+ + N L    +   +DF N+ I+YKIR H+ +++PI+ I G  E    S+
Sbjct: 549 ITEKVEEYAKSLLNHLSKTGIRAVSDFSNQRIDYKIRYHTTRRVPILWIIGRIEEKSNSV 608

Query: 620 GIRRFGSTTTQKVSLLDAIPILTKE 644
            +RR GS+ ++  ++  A+  + +E
Sbjct: 609 TVRRMGSSESEVKTVDTALGDILRE 633


>gi|310779473|ref|YP_003967806.1| threonyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
 gi|309748796|gb|ADO83458.1| threonyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
          Length = 640

 Score =  595 bits (1534), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 300/645 (46%), Positives = 425/645 (65%), Gaps = 18/645 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K+T P G IK F       +VA+SIS SLAKKA+A  ++G+  D+     ++  +E++T
Sbjct: 2   VKITLPSGDIKEFDHAPNMFEVAKSISNSLAKKAIAAKVDGEYVDMRYIADKDAEVELVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+      VIRHS AH+MA+AV  ++PE +VAIGP IE+G+YYDFD ++ F+ ++L +IE
Sbjct: 62  PDTEEGEEVIRHSAAHLMAQAVIRLFPETKVAIGPAIENGYYYDFDPKEQFTEEDLVKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M++I+  D    +  ++ E A + FE   E YKVEI+  I   E ++ Y+QGE+ DLC
Sbjct: 122 AEMKKIVKEDIKVERIEMTREDAIKHFEELGENYKVEIITDIAKGEMLSFYKQGEFMDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV ST  +K F KL  +AGAYWRGDS   ML RIYG A++ +++L  +L FLEE+EK
Sbjct: 182 RGPHVPSTKYIKAF-KLKSLAGAYWRGDSKNKMLQRIYGFAFSDEKKLKAHLKFLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQ 302
           RDHRK+ +E+ LF ++E G G  F+  KG  I   LI   R++  K  YE+I TP +L++
Sbjct: 241 RDHRKIGKELGLFFMSEYGPGFPFFMPKGMTIRNILIDLWRKEHTKAGYEQIMTPIMLNK 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW +YR NM+  +       D   FA+KPMNCPG V  +   + SY++LP+R 
Sbjct: 301 ELWETSGHWYNYRENMYTSEI------DETEFAIKPMNCPGGVLAYKQEMHSYKDLPIRA 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD-FGFE 421
            E G+V+R+E SG+LHGLMRVR FTQDDAH+F T EQ+ +E + +  LI   Y   FGFE
Sbjct: 355 GELGTVHRHEFSGALHGLMRVRSFTQDDAHIFMTPEQIEDEIIGVIELIDKFYSGLFGFE 414

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              ++LST+PEK +GSD +W+ AE+ ++G +  +    + +IN G    +GAFYGPK ++
Sbjct: 415 -YNIELSTKPEKAIGSDEIWEKAESALEGAMKRL--GKEYKINPG----DGAFYGPKLDF 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDAIGR WQCGTIQ+DFNLP RF+  Y+    EK  PVMIHR V+GSIERFIGI+IE+
Sbjct: 468 KIKDAIGRTWQCGTIQLDFNLPERFDINYIGEDGEKHRPVMIHRVVYGSIERFIGILIEH 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  PLW++P Q  + TI    V YA+EI   L+   +  E D R E+I YKIRE + K
Sbjct: 528 YAGAFPLWIAPTQVKILTINDEVVPYAKEIMAKLQEEEIRAEIDSRTESIGYKIREANGK 587

Query: 602 -KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
            K+P+ +I G  E + R + +RRFGS   + + L D + ++ +ES
Sbjct: 588 FKVPVQVILGKDEVANREVNVRRFGSKDQESMKLDDFVKMIKEES 632


>gi|119472992|ref|ZP_01614827.1| threonyl-tRNA synthetase [Alteromonadales bacterium TW-7]
 gi|119444612|gb|EAW25923.1| threonyl-tRNA synthetase [Alteromonadales bacterium TW-7]
          Length = 586

 Score =  595 bits (1533), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 284/591 (48%), Positives = 391/591 (66%), Gaps = 16/591 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPE 65
           +T PDGS ++F    +  DVA  I   LAK  +A  +NG   D  D + + + +EIIT +
Sbjct: 4   ITLPDGSQRSFENPVSTLDVANDIGPGLAKATIAGRVNGDRVDACDLINDDARLEIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  AV+ ++PE ++AIGP I++GFYYD D +   S D+L  IEK+
Sbjct: 64  DEDGLEIIRHSCAHLIGHAVKQLYPEAKMAIGPTIDNGFYYDIDLDHSLSQDDLDAIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M ++   +   +K+ +S ++AR+ FE++ E YK+EIL E+I   +   LY   E+ D+CR
Sbjct: 124 MLQLAKTNYDVVKKTVSWQEARDTFEARGETYKMEILDENIAKDDRPGLYHHEEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +  + FK+MKVAGAYWRGDS   ML RIYGTAW  +++L  YL  LEE+EKR
Sbjct: 184 GPHVPNM-KFCQNFKIMKVAGAYWRGDSENKMLQRIYGTAWGDKKQLKAYLKRLEEAEKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHR++ + +DL+H  E+  G++FWH  GW I++ L  ++R K+++  YEE+  P ++D+ 
Sbjct: 243 DHRRIGKALDLWHWQEEAPGMVFWHNDGWSIYRELEEFVREKLREYSYEEVKGPMMMDRS 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SGHW+ Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKSGHWEKYSDAMFT------TESEKREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFG  +RNEPSG+LHGLMRVRGFTQDDAHVFCT+EQ+ +E      ++   Y+ FGF+KI
Sbjct: 357 EFGCCHRNEPSGALHGLMRVRGFTQDDAHVFCTEEQVMDEVSACIKMVYDTYETFGFDKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+G D +WD AE  +   L        + I    L GEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEKRIGDDEIWDKAEVALADAL------KANDIEFDYLPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF LP R  A YV  ++E+  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 YDCLDRAWQCGTVQLDFALPGRLGATYVAENNERRTPVMIHRAILGSIERFIGILTEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
           G  P WL+P Q ++  IT    +Y  EI   L    +    D RNE I +K
Sbjct: 531 GLFPTWLAPKQVVIMNITDKQADYVHEIVQKLNKLGIRAAADLRNEKIGFK 581


>gi|253583464|ref|ZP_04860662.1| threonine-tRNA ligase [Fusobacterium varium ATCC 27725]
 gi|251834036|gb|EES62599.1| threonine-tRNA ligase [Fusobacterium varium ATCC 27725]
          Length = 637

 Score =  595 bits (1533), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 309/645 (47%), Positives = 422/645 (65%), Gaps = 18/645 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K+  P G IK F   A   ++A+SIS SLAKKAVAV I+G   D++  + R+  +E I 
Sbjct: 1   MKVELPSGDIKEFEGQANMFEIAKSISNSLAKKAVAVKIDGVPMDMATILDRDAKVEFIP 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +      +IRHS AH+MA+AV  ++P  +VAIGP IE+GFYYDFD ++ F+ ++LA+IE
Sbjct: 61  ADSEEGEEIIRHSTAHLMAQAVIRLFPGTKVAIGPAIENGFYYDFDPKEQFTEEDLAKIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M++I+  +    +  ++ E+A E FE   E YKVEI++ I   E ++ Y+QGE+ DLC
Sbjct: 121 AEMKKIVKENEKIERVMMTREEAIEHFEKLGEIYKVEIIKEIAQGEMLSFYKQGEFMDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV ST  +K F KL  VAGAYWRGDSN  ML RIYG A++ + +L  YL  LEE+E+
Sbjct: 181 RGPHVPSTSYLKAF-KLKSVAGAYWRGDSNNKMLQRIYGFAFSDEAKLKAYLTLLEEAER 239

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQ 302
           RDHRKL +E+DLF ++E G G   +  KG  I  TLI   RR+     Y+EI TP +L++
Sbjct: 240 RDHRKLGKELDLFFVSEYGPGFPIFLPKGMVIRNTLIDLWRREHTLAGYQEITTPIMLNK 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW +YR NM+     DDT      FA+KPMNCPG +  + + L SY++ P+R 
Sbjct: 300 ELWEISGHWFNYRENMY-TSTIDDT-----EFAIKPMNCPGGILAYKYQLHSYKDFPIRC 353

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY-KDFGFE 421
            E G+V+R+E SG+LHGLMRVR FTQDDAH+F T +Q+  E + +  LI   Y K FGFE
Sbjct: 354 GELGTVHRHEFSGALHGLMRVRSFTQDDAHIFMTPDQIEEEIIGVVELIDKFYSKLFGFE 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              ++LST+PEK +GS+ +W+ AE  + G LD I      ++N G    +GAFYGPK ++
Sbjct: 414 -YHIELSTKPEKAIGSNEIWEKAEAALAGALDKIGKPY--KLNPG----DGAFYGPKLDF 466

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDAIGR WQCGTIQ+DFNLP RF+  Y+    EK  PVMIHR V+GSIERFIGI+IE+
Sbjct: 467 KIKDAIGRTWQCGTIQLDFNLPERFDISYIGEDGEKHRPVMIHRVVYGSIERFIGILIEH 526

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           F G  PLWL+P Q  + TI    V YA+EI   L+   +  E D R E+I YKIRE + K
Sbjct: 527 FAGAFPLWLAPTQVKILTINDEVVPYAKEIFKALQERGIRAEIDDRAESIGYKIREANGK 586

Query: 602 -KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
            KIP+ +I G  E   R + IR+FGS   + + L + + I+  E+
Sbjct: 587 YKIPVQLILGKNEVENREVNIRKFGSQQQESMKLDEFLDIIVDEA 631


>gi|304436955|ref|ZP_07396918.1| threonine--tRNA ligase [Selenomonas sp. oral taxon 149 str.
           67H29BP]
 gi|304369906|gb|EFM23568.1| threonine--tRNA ligase [Selenomonas sp. oral taxon 149 str.
           67H29BP]
          Length = 639

 Score =  595 bits (1533), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 294/641 (45%), Positives = 415/641 (64%), Gaps = 18/641 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           IKLT PDGS++      +  DV + +S SLAKKA+A +++GKV DL+ PV ++ ++ ++T
Sbjct: 2   IKLTLPDGSVREAEAGTSILDVVKGMSNSLAKKALAASLDGKVVDLTTPVTKDAALRVLT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPE--VQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
            +D      +RH+ AH+MA+AV+ ++PE  VQ+AIGP IE+GFYYDFD E   +  +L  
Sbjct: 62  FDDEGGRHALRHTAAHVMAQAVKRLYPESHVQLAIGPAIENGFYYDFDMEHQLTDADLRD 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK+M++I+  + P +++ +   +A  LF  K E YKVE++E +P  E ++LY QGE+ D
Sbjct: 122 IEKEMKKIVKENLPLVRREIPRAEAIALFREKGENYKVELIEDLPEDEVISLYTQGEFTD 181

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LC GPHV STG+VK F KL  VAGAYWRG     ML RIYGTA+  Q+EL  YL+ LEE+
Sbjct: 182 LCAGPHVVSTGKVKAF-KLQSVAGAYWRGSEKNKMLQRIYGTAFEKQEELDAYLHMLEEA 240

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
            KRDHRKL RE+DLF + E+G G  F+H  G  +   L+ Y R    +  Y+EI+TP +L
Sbjct: 241 AKRDHRKLGRELDLFSLHEEGPGFPFFHPNGMALRNALLDYWREVHRRYGYQEISTPVIL 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            + LW+ SGHW  YR NM+  +       D   +A+KPMNCPG + V+   L SYR+LP+
Sbjct: 301 SRKLWETSGHWFHYRENMYTTEI------DEEDYAIKPMNCPGCMLVYRSQLHSYRDLPL 354

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLAE G V+R+E SG+LHGL RVR FTQDDAH+F T +Q+  E     +L   +Y+ FG 
Sbjct: 355 RLAELGLVHRHELSGALHGLFRVRNFTQDDAHLFVTPDQIEGEIQHTIDLFDEVYRTFGL 414

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
                +LSTRPE  +G+D +W+ A N ++  LD   N   D +   V  G+GAFYGPK +
Sbjct: 415 -TYKAELSTRPEDSMGTDEMWEMATNGLQKALD---NRGLDYV---VNEGDGAFYGPKID 467

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           + L+D+IGR WQCGTIQ+D +LP +F+  YV    EK  PVM+HR V+GSIERFIGI+IE
Sbjct: 468 FHLRDSIGRTWQCGTIQLDMSLPEKFDLTYVGEDGEKHRPVMLHRVVYGSIERFIGILIE 527

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           N+ G  P+W++P+Q  +  IT     YA+E+   +    L +E D RNE   YKIRE  +
Sbjct: 528 NYAGAFPVWMAPVQVRILPITERHAAYAEELYKKMFDLGLRVEVDARNEKTGYKIRESQV 587

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           KK P  ++ GD+E    ++  R++G   +  + + D I ++
Sbjct: 588 KKTPYTLVVGDQEMESGTVAFRKYGEKDSTVLPVADFIALV 628


>gi|103486185|ref|YP_615746.1| threonyl-tRNA synthetase [Sphingopyxis alaskensis RB2256]
 gi|123380057|sp|Q1GVA9|SYT_SPHAL RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|98976262|gb|ABF52413.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Sphingopyxis
           alaskensis RB2256]
          Length = 667

 Score =  594 bits (1532), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 299/667 (44%), Positives = 421/667 (63%), Gaps = 18/667 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
           M   I++T PDGS +      T +++A +I   LAK A+A  I+G++ D+  P+ E + +
Sbjct: 1   MSDMIRVTLPDGSAREVARGTTPAEIAAAIGPGLAKAALAAKIDGELRDIMRPLEEDTNL 60

Query: 60  EIITPED-PRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD---KEQPFS 115
            ++T  D   +L + RH  AH++AEAVQ+++P  Q+  GP   DGFYYDF    +  PF 
Sbjct: 61  ALVTSRDEADALELARHDYAHVLAEAVQTLFPGTQITFGPATSDGFYYDFAPTAEHGPFR 120

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            +EL  IE++M+ IIA D P  ++    +     ++   E +K E    +PA E +++Y 
Sbjct: 121 DEELPLIEEEMRRIIAADKPLRREVWDRDALIARWKKDGETFKAEWAAELPAGEEISVYW 180

Query: 176 QGE-WFDLCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQ 233
            G+ W D+CRGPH+ STG++    FKL +V+GAYWRGD     LSRIYGT W  +++L +
Sbjct: 181 SGDDWMDMCRGPHLASTGKLDPAAFKLTRVSGAYWRGDQKNAQLSRIYGTGWLNRKQLAE 240

Query: 234 YLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYE 292
           +L  LEE+ KRDHR+L +EMDLFH+ ++  G +FWH  G+ +++ L +YMRR I    Y 
Sbjct: 241 HLVRLEEAAKRDHRRLGQEMDLFHLQQEAHGSVFWHPNGFVVWRELEAYMRRAIDAAGYR 300

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAV-----KCADD---TIKDLRTFALKPMNCPGH 344
           E+ TPQV+D   W+QSGHW  YR NMF +        D+      D    ALKPMNCP H
Sbjct: 301 EVKTPQVMDARQWEQSGHWGKYRENMFVIPDEVPNTEDEGPIVSDDAEWMALKPMNCPAH 360

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           V +F  G+KSYR+LP+RL E G  +RNEP G+LHGLMRVR FTQDDAH+FC ++Q+  E 
Sbjct: 361 VLIFRQGMKSYRDLPLRLYENGCCHRNEPHGALHGLMRVRQFTQDDAHIFCREDQIVEEV 420

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
                L   IYKDFGF    +KL+ RPEKR GSDA+WD +E+ ++  +      + ++  
Sbjct: 421 RNFCALADRIYKDFGF-TYAIKLALRPEKRFGSDAMWDKSEDELRNAV-IEAGLATEQYG 478

Query: 465 TGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIH 524
              L GEGAFY PK E+ L DAIGR WQ GTIQ D  LP R +A Y+    E+  PVM+H
Sbjct: 479 WEELPGEGAFYAPKLEWHLTDAIGRTWQVGTIQSDRVLPDRLDASYIGEDGERHRPVMLH 538

Query: 525 RAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIET 584
           RA+FGS ERFIGI+IE+F G  P WL+P+QA+V TI S A +YA+     L +  +  E+
Sbjct: 539 RAIFGSYERFIGILIEHFVGRFPTWLAPVQAVVATIVSDADDYAKAATARLVAAGIRTES 598

Query: 585 DFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           D RNE INYK+REHS+ K+P +++ G +EA E ++ IR  G    + + L +AI +L  +
Sbjct: 599 DLRNEKINYKVREHSLAKVPHLLVVGKREAEEGTVAIRTLGQDGQRIMPLAEAIAMLKTQ 658

Query: 645 SLPPDCQ 651
           + PPD +
Sbjct: 659 ATPPDLK 665


>gi|331269136|ref|YP_004395628.1| threonyl-tRNA synthetase [Clostridium botulinum BKT015925]
 gi|329125686|gb|AEB75631.1| threonyl-tRNA synthetase [Clostridium botulinum BKT015925]
          Length = 637

 Score =  594 bits (1532), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 298/643 (46%), Positives = 421/643 (65%), Gaps = 18/643 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           IK+T  DG +       T S++A  IS SL KKA+   ING+  +L D + +  S+EI+T
Sbjct: 2   IKITLKDGKVLEMEKGLTVSEIAARISTSLRKKALGAKINGEKGELMDIINDDCSLEILT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            ED      +RH+ +HI+A+AV+ ++P+V++AIGP IE+GFYYDFD E  F+ + L +IE
Sbjct: 62  FEDQEGKDTLRHTASHILAQAVKRLYPDVKLAIGPSIENGFYYDFDAEFSFTPEILEKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M +I+  +    K  L  ++A +  + + E YK+E++E +P    ++ Y +GE+ DLC
Sbjct: 122 KEMNKIVKENLELKKFTLPRDEAIKFMKERNEDYKIELIEDLPEDAVISFYEEGEFVDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPHV ST +VK   KL+ VAGAYWRG+ N  ML RIYGTA+  + +L Q+L+ LEE++K
Sbjct: 182 AGPHVPSTKEVKAI-KLLSVAGAYWRGNENNKMLQRIYGTAFTKKADLEQHLHMLEEAKK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           RDHRKL +E+ LF + E+G G  F++ KG  +  TL +Y R    K  Y EI TP +L++
Sbjct: 241 RDHRKLGKELGLFDLKEEGPGFPFFYPKGMILRNTLENYWREMHEKAGYGEIRTPIILNE 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW QSGHWD Y+ NM+  K       D   +A+KPMNCPG + V+   L SYRELP+RL
Sbjct: 301 KLWHQSGHWDHYKENMYFTKI------DGEDYAIKPMNCPGSILVYKSDLHSYRELPIRL 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            E G V+R+E SG+LHGLMRVR FTQDDAH+F TKEQ+ +E L +  +I + Y  FGFE 
Sbjct: 355 GELGLVHRHEYSGALHGLMRVRNFTQDDAHIFMTKEQITSEILGVIKMIDNFYGLFGFE- 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD-RINTGVLLGEGAFYGPKFEY 481
             V+LSTRPE  +GSD  W+DA N   G++  +  +  + +IN G    +GAFYGPK ++
Sbjct: 414 YFVELSTRPEDSMGSDEDWEDATN---GLVKALNEAGLEYKINEG----DGAFYGPKIDF 466

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L+D +GR WQCGTIQ+DF +P RF+  YV +  EK  PVM HR +FGSIERFIGI+ E+
Sbjct: 467 HLRDCLGRTWQCGTIQLDFQMPERFDLSYVGADGEKHRPVMAHRVIFGSIERFIGILTEH 526

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  P WL+P+Q  +  IT + VEY +EI   LK + + +E D RNE I YKIRE  ++
Sbjct: 527 YAGAFPTWLAPVQVKIMNITDNQVEYCKEIEKTLKENGIRVELDLRNEKIGYKIREAQLQ 586

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIP +++ GDKE +E +I +R         + L+D + ++ KE
Sbjct: 587 KIPYMLVLGDKEMNENTIAVRSRKQGDLGAMQLVDFVAMVKKE 629


>gi|303229391|ref|ZP_07316181.1| threonine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
 gi|302515927|gb|EFL57879.1| threonine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
          Length = 636

 Score =  594 bits (1532), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 288/647 (44%), Positives = 418/647 (64%), Gaps = 19/647 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEI 61
           +D+K+  PDGS K +    T  +  + +S SLAKK +A  +NG++ DL + + +GS +  
Sbjct: 2   ADVKIILPDGSAKEYAAGTTLGEAVKKLSNSLAKKVLAANVNGELTDLREELVDGSEVAF 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +T E+      +RH+ +H+MA+AV+ +WPE ++AIGP I+ GFYYD D E   + ++L +
Sbjct: 62  LTFEEDGGKHTLRHTASHVMAQAVKRLWPEAKLAIGPAIDKGFYYDIDMEHTLTPEDLTK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK+M  I+  + P  K  +S ++A E F+SK E YKVE++E +P    ++ Y QG++ D
Sbjct: 122 IEKEMSRIVKENLPITKSVMSRQEAIEFFKSKNEDYKVELIEDLPEDAVISCYAQGDFVD 181

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LC GPHV STG+VK F KL  +AGAYWRGD    ML RIYGTA+  ++EL  YL+ LEE+
Sbjct: 182 LCAGPHVASTGKVKAF-KLQSIAGAYWRGDEKNKMLQRIYGTAFEKKEELDAYLHMLEEA 240

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
            KRDHRKL +E+ LF I E+G G  F+  KG  +   L ++ R    D +Y+EI TP +L
Sbjct: 241 AKRDHRKLGKELGLFVIKEEGPGFPFFLPKGMALRNELENFWREVHHDFEYDEIRTPIIL 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++HLW+ SGHWD YR NM+       TI D   +A+KPMNCPG + V+ + + SYR+LP+
Sbjct: 301 NKHLWETSGHWDHYRENMYT------TIIDDEEYAIKPMNCPGGILVYQNEMHSYRDLPL 354

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R AE G V+R+E SG+LHGL RVR FTQDDAHVF   EQM +E +K+  L   IY  FG 
Sbjct: 355 RYAELGLVHRHELSGALHGLFRVRAFTQDDAHVFMLPEQMQSELMKVIELFDRIYSQFGL 414

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
            K  V+LST+P+  +G DA+W+ A   ++  ++         I+  +  G+GAFYGPK +
Sbjct: 415 -KYHVELSTKPDNAMGDDAIWEAATEALRNAIEA------KGIDYVINPGDGAFYGPKLD 467

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           Y ++D++GR WQCGTIQ+D NLP RFN  Y+    +K   +MIHRA FGS+ERFIGI+ E
Sbjct: 468 YHIEDSLGRTWQCGTIQLDMNLPERFNVEYIGEDGQKHRTIMIHRACFGSMERFIGILTE 527

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           ++ G  P W++P+Q  V  I+   VEYA ++A  ++  ++ +E D RNE I YKIR+  +
Sbjct: 528 HYAGAFPTWMAPVQVKVLPISEKHVEYANQLAKQMRHDYVRVEVDDRNEKIGYKIRQAQM 587

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKV---SLLDAIPILTKE 644
           +K+P +++ GDKE  + S+ +R+ G      V      ++I I  KE
Sbjct: 588 EKVPYMLVVGDKEMEDNSVNVRKHGGDELGTVPFDEFFNSIKIEIKE 634


>gi|126650283|ref|ZP_01722511.1| threonyl-tRNA synthetase [Bacillus sp. B14905]
 gi|126592933|gb|EAZ86915.1| threonyl-tRNA synthetase [Bacillus sp. B14905]
          Length = 637

 Score =  594 bits (1532), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 287/641 (44%), Positives = 424/641 (66%), Gaps = 18/641 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           I + FPDG  + F    T +++A++I   L KKAVA ++NG + DL+ P+ E   I +  
Sbjct: 6   IHIQFPDGQQQAFTKGVTLTEIAQAIRPELRKKAVAGSVNGTIVDLTRPIMEDAQITLYD 65

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
                 + VIRHS AH++A+AV+ ++P  Q  +GP+IE+GFYYD D     +  +L QIE
Sbjct: 66  ASSKEGIEVIRHSTAHLLAQAVKRLYPHAQFGVGPVIENGFYYDIDIADTLALSDLQQIE 125

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K M++I+  +    ++ +S  +A+ELF    +A K+E+LESIPA E VT+Y QGE++DLC
Sbjct: 126 KTMKQIVRENVQIKRREVSRNEAKELF--AHDALKLELLESIPADETVTIYEQGEFYDLC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RG HV STG+++ F +LM V+GAYWRGDS+  ML RIYG A+ T++EL QY  FL+E+EK
Sbjct: 184 RGSHVPSTGKLQHF-QLMHVSGAYWRGDSDNQMLQRIYGVAFATKEELQQYFVFLDEAEK 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           R+HRKL +E+ LF  +E+  G+ F+   G  +   L SY+R  + K DY E+ TP +++Q
Sbjct: 243 RNHRKLGKELSLFMFSEEAPGMPFYLANGQILRNELESYLRNLQAKYDYREVRTPLMMNQ 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+QSGHWD Y+ NM+  +  D      ++FALKPMNCPGH+ +F + L SYR+LP+R+
Sbjct: 303 RLWEQSGHWDHYKDNMYFTQVDD------QSFALKPMNCPGHMLIFKNSLHSYRDLPIRM 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFG V+R+E SG+L+GL+RVR F QDDAH+F T +Q+ NE      +I  +Y  FGF+ 
Sbjct: 357 AEFGQVHRHEFSGALNGLLRVRSFCQDDAHIFATPQQIENEIALALKIIDEVYNVFGFQ- 415

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRP+  +G  +LWD AE  ++ VL  +       I+  +  G+GAFYGPK +  
Sbjct: 416 YSVELSTRPDDYMGELSLWDQAEEALENVLTNLG------IDYTINEGDGAFYGPKIDIH 469

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDAI R  QC T+Q+DF LP +F+  Y+N H+EK  PV+IHRAVFGSI+RF+GI+IE+F
Sbjct: 470 IKDAIQRSHQCATVQLDFQLPEKFDLTYINEHNEKVRPVVIHRAVFGSIDRFLGILIEHF 529

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P+WL+P Q  V  +  +  +YA+++   L+   + ++ D R E +  KIRE  + K
Sbjct: 530 GGAFPIWLAPQQVQVIAVADAHQDYAKQVVKALQHEQIRVQLDDRQEKLGKKIREAQLHK 589

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           IP I++ GD+E + +++ +RR G   T + S+   I  +T+
Sbjct: 590 IPYILVIGDRETAHQNVSVRRHGQQATVEYSISQLIEEMTE 630


>gi|302389962|ref|YP_003825783.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase
           [Thermosediminibacter oceani DSM 16646]
 gi|302200590|gb|ADL08160.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase
           [Thermosediminibacter oceani DSM 16646]
          Length = 637

 Score =  594 bits (1532), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 293/644 (45%), Positives = 428/644 (66%), Gaps = 16/644 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSI 59
           M   +K+       + +P   T  D+A+ +   LAK+A+   +NG + DL+  + E  S+
Sbjct: 1   MQETVKVVLKGNEERVYPKGVTVMDIAQDLGPRLAKEALVAKVNGVIVDLNHRIEEDSSV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EI+T ED       RHS +H+MA+AV+ ++P V++AIGP IE+GFYYDFD+++ F+ ++L
Sbjct: 61  EILTFEDEEGKDAFRHSTSHVMAQAVKRLFPNVKLAIGPSIEEGFYYDFDRDESFTPEDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IEK+M++I+A D PF++  +S E+A ++ +   E YKVE++E++P    ++ Y+ GE+
Sbjct: 121 ERIEKEMEKIVAEDQPFIRMEVSREEAVKILKEMGEPYKVELVENLPDDAKISFYKNGEF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLC GPH+ STG++K F KL  +AGAYW+GDS   ML RIYGT++  +  L +YL  LE
Sbjct: 181 IDLCAGPHIPSTGRIKAF-KLTSLAGAYWKGDSRNKMLQRIYGTSFPKKSMLDEYLKKLE 239

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQ 298
           E++KRDHRKL +E+ LF + E+G G  F+H KG  ++ TLI + R++  K  Y+EI TP 
Sbjct: 240 EAKKRDHRKLGKELGLFSMHEEGPGFPFFHPKGMVLWNTLIDFWRKEHQKRGYQEIKTPI 299

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L++ LW++SGHWD Y+ NM+  +       D   +A+KPMNCPG + V+   + SYREL
Sbjct: 300 ILNEELWKRSGHWDHYKTNMYFTQI------DGEGYAIKPMNCPGGILVYKSDVHSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P++LAE G V+R+E SG LHGLMRVR FTQDDAH++    Q+  E L++ NL   IY+ F
Sbjct: 354 PLKLAELGLVHRHELSGVLHGLMRVRSFTQDDAHIYMMPSQIEQEILEVINLADHIYRIF 413

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+   V+LSTRPE  +G D LW+ A   +K  LD  K     RIN G    +GAFYGPK
Sbjct: 414 GFD-YHVELSTRPENSMGPDELWERATAALKNALD--KKGLPYRINEG----DGAFYGPK 466

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++ LKD+IGR WQCGTIQ+DF +P RF+  Y+    EK  PVMIHR +FGS+ERFIGI+
Sbjct: 467 IDFHLKDSIGRTWQCGTIQLDFMMPERFDLTYIGPDGEKHRPVMIHRTIFGSLERFIGIL 526

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE++ G  P+WL+PIQ  V  I+   ++YA+++   L++  + +E D RNE I YKIRE 
Sbjct: 527 IEHYAGAFPVWLAPIQVKVLPISEKFMDYARKVTAELENSDIRVELDERNEKIGYKIREA 586

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            ++KIP ++I G+KEA+E ++ +R          SL D I  +T
Sbjct: 587 QLQKIPYMLIVGEKEAAEGTVSVRVREKGDVGMKSLKDFIEEVT 630


>gi|170759804|ref|YP_001788457.1| threonyl-tRNA synthetase [Clostridium botulinum A3 str. Loch Maree]
 gi|238688792|sp|B1L0T7|SYT_CLOBM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|169406793|gb|ACA55204.1| threonine--tRNA ligase [Clostridium botulinum A3 str. Loch Maree]
          Length = 635

 Score =  594 bits (1531), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 299/642 (46%), Positives = 422/642 (65%), Gaps = 16/642 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           IK+T  DG +  F      SD+A  IS +L KKA+A  I+G+  DL   + ++ S+EI+T
Sbjct: 2   IKITLKDGKVMEFEEGIKISDIAMKISPALYKKALAAKIDGETVDLMTELHKDSSLEILT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            ED      +RH+ AHI+A+AV+ ++PEV++AIGP I+ GFYYDF+ +  F+ + L +IE
Sbjct: 62  FEDEMGKWALRHTGAHILAQAVKRLYPEVKLAIGPAIDTGFYYDFEADFTFTPEMLEKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            ++++II  +    +  L  E+A +L + K E YKVE++E +P  E ++ Y+QG++ DLC
Sbjct: 122 AEIKKIIKENHKLERFELPREEAIDLMKEKNEDYKVELIEDLPEGEVISFYKQGDFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPHV STG+VK   KL+ +AGAYWRGD N  ML RIYGTA+  + EL +YL  LEE++K
Sbjct: 182 AGPHVPSTGKVKSV-KLLSLAGAYWRGDENNKMLQRIYGTAFTKKSELDEYLNMLEEAKK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQ 302
           RDHRKL +E+DLF I E+G G  F+H KG  I   L S+ R +  K  Y+EI TP +L++
Sbjct: 241 RDHRKLGKELDLFSIHEEGPGFPFFHPKGMIIRNILESFWREEHTKAGYQEIRTPLILNE 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW QSGHWD Y+ NM+     D        +A+KPMNCPG + V+ + + SYR+LP+RL
Sbjct: 301 ALWHQSGHWDHYKENMYFTNIDDGD------YAIKPMNCPGGILVYKNSMHSYRDLPLRL 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           +E G V+R+E SG+LHGLMRVR FTQDDAH++ TKEQ+  E + I  LI   YK FGFE 
Sbjct: 355 SELGIVHRHELSGALHGLMRVRCFTQDDAHLYMTKEQIKEEIVGIIKLIDKFYKLFGFE- 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +GSD  W+ A N ++  LD+I    + R+N G    +GAFYGPK ++ 
Sbjct: 414 YFVELSTRPEDSMGSDEDWEIATNGLREALDSI--GKEYRVNEG----DGAFYGPKIDFH 467

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LKD IGR WQCGTIQ+DF +P RF+  Y+ +  EK  PVM+HR ++GS+ERFIGI+IE +
Sbjct: 468 LKDCIGRTWQCGTIQLDFQMPERFDLSYIGADGEKHRPVMVHRTIYGSVERFIGILIEQY 527

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P+Q  +  IT +  +Y +++   LK +++ +E D RNE I YKIRE  ++K
Sbjct: 528 AGAFPTWLAPVQVKLMNITDAQYDYLKKVEEALKENNIRVEIDTRNEKIGYKIREAQLQK 587

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IP ++I GDKE     + +R         +SL + I  +  E
Sbjct: 588 IPYMLILGDKEVEAGKVAVRSRKDGDLGAISLEEFIEKIKNE 629


>gi|254796675|ref|YP_003081511.1| threonyl-tRNA synthetase [Neorickettsia risticii str. Illinois]
 gi|254589907|gb|ACT69269.1| threonyl-tRNA synthetase [Neorickettsia risticii str. Illinois]
          Length = 647

 Score =  593 bits (1529), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 284/611 (46%), Positives = 404/611 (66%), Gaps = 15/611 (2%)

Query: 22  TGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHI 80
           T   V    +  +  K +A ++NG   DLS  +  + +IE +  E    + ++RH CAHI
Sbjct: 22  TVGSVISGFNAGVFSKTIAASVNGVSVDLSYCLDCDANIEPVLLESEAGIEILRHDCAHI 81

Query: 81  MAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQY 140
           MA+AVQ ++PE ++ IGP+I+DGFYYDF    PFS  +  +IE+K++EII R+ P +++ 
Sbjct: 82  MAQAVQELYPETKLGIGPVIDDGFYYDFSTLAPFSDSDFEKIEEKIKEIIQRNYPIIREE 141

Query: 141 LSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKL 200
            S + A   F+ K E YKVE++  IP KE +++Y+QG++ DLCRGPH  STG +K F KL
Sbjct: 142 WSRDDAVSFFQKKGEKYKVELVSKIPPKEKISIYKQGDFIDLCRGPHAPSTGWLKHF-KL 200

Query: 201 MKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAE 260
           +KV+ AYW GD+    L RIYGTAW T+  L  YL FL E+++RDHR + + M+LFH+ E
Sbjct: 201 LKVSTAYWLGDAKNDSLQRIYGTAWATKDGLESYLSFLHEAKRRDHRAIGKTMELFHLQE 260

Query: 261 DGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMF 319
           +  G +FWH  G+ +++ L +Y+R K+K  DY E+ TP V  + LW++SGHW  ++ NMF
Sbjct: 261 EAQGQVFWHENGFLLYRVLENYIRSKLKAHDYREVKTPVVYSKCLWERSGHWSKFKENMF 320

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHG 379
            ++  D        F+LKPMNCP H+ VF   LKSYR+LP+RLAEFG  +RNE SG+LHG
Sbjct: 321 VIRSDDGE------FSLKPMNCPAHIEVFKQSLKSYRDLPLRLAEFGMCHRNEASGALHG 374

Query: 380 LMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDA 439
           LMRVRGF QDDAH+FCT EQ+ +E +    L+  +Y+D GF ++ V+ S RPE R+G+D 
Sbjct: 375 LMRVRGFVQDDAHIFCTPEQICDETVAFCELLKEVYRDLGFTEVEVRFSDRPEVRLGNDE 434

Query: 440 LWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVD 499
            WD AE  +K  +D  K      +N G    EGAFYGPK E++L DA+ R WQCGT+QVD
Sbjct: 435 TWDKAEIALKSAMD--KAGLVYTLNPG----EGAFYGPKIEFVLVDALKRKWQCGTLQVD 488

Query: 500 FNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTT 559
           F LP R +A Y++   +K HPVM+HRA+ G+ ERF+GI+IE++ G  PLWL+P Q  V T
Sbjct: 489 FVLPERLDATYIDHEGKKQHPVMLHRAILGTFERFLGILIEHYDGKFPLWLAPTQVAVLT 548

Query: 560 ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSI 619
           IT    EYA+ + N L    +   +DF N+ I+YKIR H+ +++PI+ I G  E    S+
Sbjct: 549 ITEKVEEYAKSLLNHLSKTGIRAVSDFSNQRIDYKIRYHTTRRVPILWIIGRIEEKNNSV 608

Query: 620 GIRRFGSTTTQ 630
            +RR GS+ ++
Sbjct: 609 TVRRMGSSESE 619


>gi|168188008|ref|ZP_02622643.1| threonyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
 gi|169294168|gb|EDS76301.1| threonyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
          Length = 637

 Score =  593 bits (1529), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 303/643 (47%), Positives = 414/643 (64%), Gaps = 18/643 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           +K+T  DG +       T S++A  IS SL KKA+   ING+  +L D + E S +EI T
Sbjct: 2   VKITLKDGKVLEVEKGLTVSEIAARISTSLRKKALGAKINGEKAELMDVINEDSTLEIFT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            ED      +RH+ +HI+A+AV+ ++PEV++AIGP IE+GFYYDFD E  F+ + L +IE
Sbjct: 62  FEDQEGKDTLRHTASHILAQAVKRLYPEVKLAIGPSIENGFYYDFDAEFSFTPEILEKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M +I+  +    K   S E A E  + + E YKVE++E +P    ++ Y QG++ DLC
Sbjct: 122 KEMNKIVKENLQLKKFTKSREDAIEFMKERNEDYKVELIEDLPEDAVISFYEQGDFVDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPHV ST +VK   KL+ VAGAYWRG+ N  ML RIYGTA+  + EL +YL+ LEE++K
Sbjct: 182 AGPHVPSTKEVKAI-KLLSVAGAYWRGNENNKMLQRIYGTAFIKKSELEEYLHMLEEAKK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           RDHRKL RE+ LF + E+G G  F++ KG  +  TL +Y R    K  Y EI TP +L++
Sbjct: 241 RDHRKLGRELGLFDLKEEGPGFPFFYPKGMILRNTLENYWREMHEKAGYGEIRTPIILNE 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW QSGHWD Y+ NM+  K       D   +A+KPMNCPG + V+   L SYRELP+RL
Sbjct: 301 KLWHQSGHWDHYKENMYFTKI------DGEDYAIKPMNCPGSILVYKSDLHSYRELPIRL 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            E G V+R+E SG+LHGLMRVR FTQDDAH+F TKEQ+ +E L +  +I + Y  FGFE 
Sbjct: 355 GELGLVHRHEYSGALHGLMRVRNFTQDDAHIFMTKEQITSEILGVIKMIDNFYSLFGFE- 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD-RINTGVLLGEGAFYGPKFEY 481
             V+LSTRPE  +GSD  W+ A N   G++  +  +  + +IN G    +GAFYGPK ++
Sbjct: 414 YFVELSTRPEDSMGSDEEWEAATN---GLVKALNEAGLEYKINEG----DGAFYGPKIDF 466

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L+D +GR WQCGTIQ+DF +P RF+  YV    EK  PVM HR +FGSIERFIGI+ E+
Sbjct: 467 HLRDCLGRTWQCGTIQLDFQMPERFDLSYVGPDGEKHRPVMAHRVIFGSIERFIGILTEH 526

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  P WL+P+Q  +  IT + VEY +EI   L    + +E D RNE I YKIRE  ++
Sbjct: 527 YAGAFPTWLAPVQVKIMNITDNQVEYCKEIQKALNESGIRVELDLRNEKIGYKIREAQLQ 586

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIP +++ GDKE +E +I +R         + L D I ++ KE
Sbjct: 587 KIPYMLVLGDKEMNENTIAVRARKQGDLGAMKLDDFIAMVRKE 629


>gi|148381087|ref|YP_001255628.1| threonyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
 gi|153932923|ref|YP_001385460.1| threonyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|153935084|ref|YP_001388867.1| threonyl-tRNA synthetase [Clostridium botulinum A str. Hall]
 gi|166223333|sp|A7FY87|SYT_CLOB1 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|166223334|sp|A5I6L8|SYT_CLOBH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|148290571|emb|CAL84700.1| threonyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
 gi|152928967|gb|ABS34467.1| threonyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|152930998|gb|ABS36497.1| threonine--tRNA ligase [Clostridium botulinum A str. Hall]
          Length = 635

 Score =  593 bits (1528), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 296/642 (46%), Positives = 423/642 (65%), Gaps = 16/642 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           IK+T  DG +  F      SD+A  IS +L KKA+A  I+G+  DL   + ++ S+EI+T
Sbjct: 2   IKITLKDGKVMEFEEGIKISDIAMKISPALYKKALAAKIDGETVDLMTELHKDSSLEILT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            ED      +RH+ +H++A+AV+ ++PEV++AIGP I+ GFYYDF+ +  F+ + L +IE
Sbjct: 62  FEDEMGKWALRHTGSHMLAQAVKRLYPEVKLAIGPAIDTGFYYDFEADFTFTPEMLEKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            ++++II  +    +  L  E+A +L + K E YKVE++E +P  E ++ Y+QG++ DLC
Sbjct: 122 AEIKKIIKENHKLERFELPREEAIKLMKEKNEDYKVELIEDLPEGEVISFYKQGDFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPHV STG+VK   KL+ +AGAYWRGD N  ML RIYGTA+  + EL +YL  +EE++K
Sbjct: 182 AGPHVPSTGKVKSV-KLLSLAGAYWRGDENNKMLQRIYGTAFTKKSELDEYLNMIEEAKK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQ 302
           RDHRKL +E+DLF I E+G G  F+H KG  +   L S+ R +  K  Y+EI TP +L++
Sbjct: 241 RDHRKLGKELDLFSIHEEGPGFPFFHPKGMIVRNILESFWREEHTKAGYQEIRTPLILNE 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW QSGHWD Y+ NM+     DD       +A+KPMNCPG + V+ + + SYR+LP+RL
Sbjct: 301 ALWHQSGHWDHYKENMYFTNIDDDD------YAIKPMNCPGGILVYKNSMHSYRDLPLRL 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           +E G V+R+E SG+LHGLMRVR FTQDDAH++ TKEQ+  E + I  LI   YK FGFE 
Sbjct: 355 SELGIVHRHELSGALHGLMRVRCFTQDDAHLYMTKEQIKEEVVGIIKLIDKFYKLFGFE- 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +GSD  W+ A N ++  LD+I    + R+N G    +GAFYGPK ++ 
Sbjct: 414 YFVELSTRPEDSMGSDEDWEIATNGLREALDSI--GKEYRVNEG----DGAFYGPKIDFH 467

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LKD IGR WQCGTIQ+DF +P RF+  Y+ +  EK  PVM+HR ++GS+ERFIGI+IE +
Sbjct: 468 LKDCIGRTWQCGTIQLDFQMPERFDLSYIGADGEKHRPVMVHRTIYGSVERFIGILIEQY 527

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P+Q  +  IT S  +Y +++   LK +++ +E D RNE I YKIRE  ++K
Sbjct: 528 AGAFPTWLAPVQVKLMNITDSQYDYLKKVEEALKENNIRVEIDTRNEKIGYKIREAQLQK 587

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P ++I GDKE     + +R         +SL + I  +  E
Sbjct: 588 VPYMLILGDKEVEAGKVAVRSRKDGDLGAISLEEFIEKIKNE 629


>gi|289208097|ref|YP_003460163.1| threonyl-tRNA synthetase [Thioalkalivibrio sp. K90mix]
 gi|288943728|gb|ADC71427.1| threonyl-tRNA synthetase [Thioalkalivibrio sp. K90mix]
          Length = 638

 Score =  593 bits (1528), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 286/627 (45%), Positives = 415/627 (66%), Gaps = 22/627 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP+   +T PDGS + F    T  DVA+ I   LAK  +A  +NG++ D    +  +  +
Sbjct: 1   MPA---VTLPDGSRREFDHPVTVLDVAKDIGPGLAKATLAGKVNGQLVDARHEIDADAEL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            I+T  DP  + +IRHS AH+MA+AV+ ++PE QV IGP IE+GFYYDF  ++ F+ ++L
Sbjct: 58  AIVTDRDPEGVEIIRHSTAHLMAQAVKQLFPEAQVTIGPTIENGFYYDFAYDRGFTPEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IEK+M+E+  +D P  +  +  ++A + F    E YK EI+ SIP  EN++LY+QG++
Sbjct: 118 EKIEKRMKELAKQDLPVERSLMDRDEAVKYFRDMGEEYKAEIIASIPQGENISLYKQGDF 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPH+ STG++K F KL KVAGAYWRGDS+  ML RIYGTAW  + +L +YL  L+
Sbjct: 178 VDLCRGPHIPSTGKLKAF-KLTKVAGAYWRGDSDNEMLQRIYGTAWANKDQLKEYLERLK 236

Query: 240 ESEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISY---MRRKIKDDYEEIN 295
           E+E+RDHRK+ +E+DLF I  E G G++FWH KG +I + +  Y   M  K   D+  + 
Sbjct: 237 EAERRDHRKIGQELDLFSIQDEAGGGLVFWHPKGARIRREIEKYWYDMHEKAGYDF--VV 294

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           +P + +  LW+ SGH D Y  +M+     +    + + F LKPMNCP HV ++   L SY
Sbjct: 295 SPHIANLELWKTSGHADFYAESMY-----EPMEDEHQAFQLKPMNCPFHVLMYKDRLHSY 349

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           R+LP+R AE G+VYR E SG+LHGLMRVRGFTQDDAH+FC ++Q+  E + + +L + + 
Sbjct: 350 RDLPLRWAEMGTVYRREMSGALHGLMRVRGFTQDDAHIFCREDQIEAEVMAVIDLTLEVL 409

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           + FGFEK  V LST+PE  VGSD +W+ A   ++  ++      +  +   V  G GAFY
Sbjct: 410 QTFGFEKFDVNLSTKPEDAVGSDEIWEHATASLRSAIE------KKGLEYSVDEGGGAFY 463

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  + DAIGR+WQC T+Q+DFNLP RF+  YV   +E+  P+MIHRA+ GS+ERF 
Sbjct: 464 GPKIDIKIHDAIGREWQCSTVQLDFNLPERFDMEYVAEDNERRRPIMIHRALLGSVERFF 523

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
           G++IE++ G+ P WL+P+QA V TIT    +YA+E+   L+     +E+D RNE I +KI
Sbjct: 524 GVLIEHYAGHFPTWLAPVQAEVLTITERQDDYAREVTRALRDKGFRVESDLRNEKIGFKI 583

Query: 596 REHSIKKIPIIIICGDKEASERSIGIR 622
           REH++K++P +++ GDKE     + +R
Sbjct: 584 REHTLKRVPYLLVLGDKEMENGQVAVR 610


>gi|303230749|ref|ZP_07317496.1| threonine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
 gi|302514509|gb|EFL56504.1| threonine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
          Length = 636

 Score =  593 bits (1528), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 287/647 (44%), Positives = 419/647 (64%), Gaps = 19/647 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEI 61
           +D+K+  PDGS K +    T ++  + +S SLAKK +A  +NG++ DL + + +GS +  
Sbjct: 2   ADVKIILPDGSAKEYAAGTTLAEAVKKLSNSLAKKVLAANVNGELTDLREELVDGSEVAF 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +T E+      +RH+ +H+MA+AV+ +WPE ++AIGP I+ GFYYD D E   + ++L +
Sbjct: 62  LTFEEDGGKHTLRHTASHVMAQAVKRLWPEAKLAIGPAIDKGFYYDIDMEHTLTPEDLTK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK+M  I+  + P  K  +S ++A E F+SK E YKVE++E +P    ++ Y QG++ D
Sbjct: 122 IEKEMSRIVKENLPITKSVMSRQEAIEFFKSKNEDYKVELIEDLPEDAVISCYAQGDFVD 181

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LC GPHV STG+VK F KL  +AGAYWRGD    ML RIYGTA+  ++EL  YL+ LEE+
Sbjct: 182 LCAGPHVASTGKVKAF-KLQSIAGAYWRGDEKNKMLQRIYGTAFEKKEELDAYLHMLEEA 240

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
            KRDHRKL +E+ LF I E+G G  F+  KG  +   L ++ R    D +Y+EI TP +L
Sbjct: 241 AKRDHRKLGKELGLFVIKEEGPGFPFFLPKGMALRNELENFWREVHHDFEYDEIRTPIIL 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++HLW+ SGHWD YR NM+       TI D   +A+KPMNCPG + V+ + + SYR+LP+
Sbjct: 301 NKHLWETSGHWDHYRENMYT------TIIDDEEYAIKPMNCPGGILVYQNEMHSYRDLPL 354

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R AE G V+R+E SG+LHGL RVR FTQDDAHVF   EQM +E +K+  L   IY  FG 
Sbjct: 355 RYAELGLVHRHELSGALHGLFRVRAFTQDDAHVFMLPEQMQSELMKVIELFDRIYSQFGL 414

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
            K  V+LST+P+  +G DA+W+ A   ++  ++         I+  +  G+GAFYGPK +
Sbjct: 415 -KYHVELSTKPDNAMGDDAIWEAATEALRNAIEA------KGIDYVINPGDGAFYGPKLD 467

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           Y ++D++GR WQCGTIQ+D NLP RFN  Y+    +K   +MIHRA FGS+ERFIGI+ E
Sbjct: 468 YHIEDSLGRTWQCGTIQLDMNLPERFNVEYIGEDGQKHRTIMIHRACFGSMERFIGILTE 527

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           ++ G  P W++P+Q  V  I+   V+YA ++A  ++  ++ +E D RNE I YKIR+  +
Sbjct: 528 HYAGAFPTWMAPVQVKVLPISEKHVKYANQLAKQMRHDYVRVEVDDRNEKIGYKIRQAQM 587

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKV---SLLDAIPILTKE 644
           +K+P +++ GDKE  + S+ +R+ G      V      ++I I  KE
Sbjct: 588 EKVPYMLVVGDKEMEDNSVNVRKHGGDELGTVPFDEFFNSIKIEIKE 634


>gi|149180875|ref|ZP_01859377.1| threonyl-tRNA synthetase [Bacillus sp. SG-1]
 gi|148851394|gb|EDL65542.1| threonyl-tRNA synthetase [Bacillus sp. SG-1]
          Length = 647

 Score =  593 bits (1528), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 290/639 (45%), Positives = 432/639 (67%), Gaps = 21/639 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEII 62
           +I + FPDG  KN+P   + +++A+SIS SL K++    +NG + DL+  + E  SIE++
Sbjct: 7   EIIIKFPDGKEKNYPAGVSLAEIAQSISPSLKKRSAGGKVNGVLFDLNRRIEEDASIELL 66

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           + +    + ++RHS AHI+A+AVQ ++  VQ+ +GP+I++GFYYD D E+  S  +L +I
Sbjct: 67  SLQSEEGVKMMRHSAAHILAQAVQRLYGNVQLGVGPVIDNGFYYDLDLEKSLSQSDLVEI 126

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M+ II+ + P  ++ LS ++A  LF S  +  KVE++E IP  E +++YRQGE+ DL
Sbjct: 127 EKEMKNIISENHPISREELSRKEAESLFSS--DPLKVELIEDIPEDETLSVYRQGEFVDL 184

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ STG VK F KL  V+GAYWRGDSN  +L R+YG A+ +Q+EL +Y  FLEE++
Sbjct: 185 CRGPHLPSTGMVKAF-KLTHVSGAYWRGDSNNKVLQRVYGVAFPSQEELDEYFLFLEEAQ 243

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEINTPQVL 300
           KR+HRKL  E++LF  +E+  G+ F+   G KI   L S++R +I++  DYEE+ TP ++
Sbjct: 244 KRNHRKLGNELELFMFSEEAPGMPFYLNNGQKIRNELESFLR-QIQNSFDYEEVRTPIMM 302

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ LW+QSGHW+ Y+ NM+  +  D      ++FALKPMNCPGH+ +F   L SYR+LP+
Sbjct: 303 NRKLWEQSGHWEHYKENMYFSEVDD------QSFALKPMNCPGHMLIFKDKLHSYRDLPI 356

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AEFG V+R+E SG+L+G++RVR F QDDAH+F T +Q+  E      LI  +Y+ FGF
Sbjct: 357 RMAEFGQVHRHEFSGALNGMLRVRTFCQDDAHIFVTPDQIEEEITSALKLIDHVYRTFGF 416

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
               ++LSTRPE  +G +ALWD AE  +K VL  +  S    IN G    +GAFYGPK +
Sbjct: 417 -NYDIELSTRPEDYMGEEALWDKAEGSLKNVLTKLGYSFS--INEG----DGAFYGPKID 469

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
             +KDA+ R  QC T+Q+DF +P +F   Y++ +++K  PV+IHRAVFGSI+RF+GI+IE
Sbjct: 470 IHIKDALKRSHQCATVQLDFQMPEKFELHYIDENNQKVRPVVIHRAVFGSIDRFLGILIE 529

Query: 541 NFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           +F G  P+WLSP+Q  V  ++     +Y +EI + LK   L +E D R E + YKIRE  
Sbjct: 530 HFAGAFPVWLSPLQVSVIPVSKRHHGQYCEEIRSRLKEEGLRVECDLREEKLGYKIREAQ 589

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           +KK P I++ GDKE   +++ +R +G   +Q+  L + I
Sbjct: 590 MKKAPYILVVGDKEQESQTVNVRSYGEQNSQEEKLEEFI 628


>gi|257467995|ref|ZP_05632091.1| threonyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
 gi|317062281|ref|ZP_07926766.1| threonine-tRNA ligase [Fusobacterium ulcerans ATCC 49185]
 gi|313687957|gb|EFS24792.1| threonine-tRNA ligase [Fusobacterium ulcerans ATCC 49185]
          Length = 637

 Score =  592 bits (1527), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 307/645 (47%), Positives = 421/645 (65%), Gaps = 18/645 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K+  P G IK F       +VA+SIS SLAKKAVAV I+G + D++  + R+  +E I 
Sbjct: 1   MKVELPSGDIKEFEGQVNMFEVAKSISNSLAKKAVAVKIDGTLMDMATILDRDAKVEFIP 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +      VIRHS AH+MA+AV  ++P  +VAIGP IE+GFYYDFD ++ F+ ++L +IE
Sbjct: 61  ADSEEGEEVIRHSTAHLMAQAVIRLFPGTKVAIGPAIENGFYYDFDPKEQFTEEDLVKIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M++I+  +    +  ++ E+A E FE   E YKVEI++ I   E ++ Y+QGE+ DLC
Sbjct: 121 AEMKKIVKENEKIERVMMTREEAIEHFEKLGEIYKVEIIKEIAQGEILSFYKQGEFMDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV ST  +K F KL  VAGAYWRGDSN  ML RIYG A++ + +L  YL  LEE+E+
Sbjct: 181 RGPHVPSTSYLKAF-KLKSVAGAYWRGDSNNKMLQRIYGFAFSDEAKLKAYLTLLEEAER 239

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQ 302
           RDHRKL +E+DLF ++E G G   +  KG  I  TLI   RR+     Y+EI TP +L++
Sbjct: 240 RDHRKLGKELDLFFVSEYGPGFPIFLPKGMVIRNTLIDLWRREHTLAGYQEITTPIMLNK 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW +YR NM+     D+T      FA+KPMNCPG +  + + L SY++ P+R 
Sbjct: 300 ELWEISGHWFNYRENMYT-STIDET-----EFAIKPMNCPGGILAYKYQLHSYKDFPIRC 353

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY-KDFGFE 421
            E G+V+R+E SG+LHGLMRVR FTQDDAH+F T +Q+  E + +  LI   Y K FGFE
Sbjct: 354 GELGTVHRHEFSGALHGLMRVRSFTQDDAHIFMTPDQIEEEIIGVVELIDKFYSKLFGFE 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              ++LST+PEK +GS+ +W+ AE  + G LD I      ++N G    +GAFYGPK ++
Sbjct: 414 -YHIELSTKPEKAIGSNEIWEKAEAALAGALDKIGKPY--KLNPG----DGAFYGPKLDF 466

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDAIGR WQCGTIQ+DFNLP RF+  Y+    EK  PVMIHR V+GSIERFIGI+IE+
Sbjct: 467 KIKDAIGRTWQCGTIQLDFNLPERFDISYIGEDGEKHRPVMIHRVVYGSIERFIGILIEH 526

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           F G  PLWL+P Q  + TI    V YA+EI   L+   +  E D R E+I YKIRE + K
Sbjct: 527 FAGAFPLWLAPTQVKILTINDEVVPYAKEIFKALQERGIRAEIDDRAESIGYKIREANGK 586

Query: 602 -KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
            K+P+ +I G  E   R + IR+FGS   + + L + + I+  E+
Sbjct: 587 YKVPVQLILGKNEVENREVNIRKFGSQQQESMKLDEFLDIIVDEA 631


>gi|299537247|ref|ZP_07050550.1| threonyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
 gi|298727488|gb|EFI68060.1| threonyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
          Length = 638

 Score =  592 bits (1526), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 286/640 (44%), Positives = 420/640 (65%), Gaps = 18/640 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           I + FPDG  + F    T +D+A++I   L KKAVA ++NG + DL+ P+ E   I +  
Sbjct: 6   IHIQFPDGQQQAFTKGVTLTDIAQAIRPELRKKAVAGSVNGTIIDLTRPIMEDAQITLYD 65

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
                 + VIRHS AH+ A+A++ ++P  Q  +GP+IE+GFYYD D     +  +L QIE
Sbjct: 66  ASSKEGIEVIRHSTAHLFAQAIKRLYPHAQFGVGPVIENGFYYDIDIADTLTPSDLQQIE 125

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           KKM++I+  + P  ++ +S E+A++LF    +  K+E+LE+IPA E VT+Y QGE++DLC
Sbjct: 126 KKMKQIVQENIPVHRREVSREEAKQLF--AHDVLKLELLEAIPADELVTIYEQGEFYDLC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV+STG+++ F KLM V+GAYWRGDS   ML RIYG A+ T++EL  +  FLEE+EK
Sbjct: 184 RGPHVQSTGKLQHF-KLMHVSGAYWRGDSKNQMLQRIYGVAFATKEELRDHFIFLEEAEK 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           R+HRKL +E+ LF  +E+  G+ F+   G  +   L SY+R  + K DY E+ TP +++Q
Sbjct: 243 RNHRKLGKELSLFMFSEEAPGMPFYLANGQILRNELESYLRHLQAKYDYGEVRTPLMMNQ 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+QSGHWD Y+ NM+  +  D      ++FALKPMNCPGH+ +F + L SYR+LP+R+
Sbjct: 303 RLWEQSGHWDHYKDNMYFTQVDD------QSFALKPMNCPGHMLIFKNALHSYRDLPIRM 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFG V+R+E SG+L+GL+RVR F QDDAH+F T +Q+ +E      +I  +Y  FGF  
Sbjct: 357 AEFGQVHRHEFSGALNGLLRVRTFCQDDAHIFATPQQIEDEIALALKIIDEVYNVFGF-A 415

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             ++LSTRP+  +G  ALWD AE  ++ VL+ +       I   +  G+GAFYGPK +  
Sbjct: 416 YTIELSTRPDDYMGDLALWDQAEAALENVLNNLG------IAYTINAGDGAFYGPKIDIH 469

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDAI R  QC T+Q+DF LP +F+  Y+N H+E+  PV+IHRAVFGSI+RF+GI+IE+F
Sbjct: 470 IKDAIQRSHQCATVQLDFQLPEKFDLTYINEHNERVRPVVIHRAVFGSIDRFLGILIEHF 529

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P Q  V  +  +   YA+++   L+   + ++ D R E +  KIRE  ++K
Sbjct: 530 GGAFPTWLAPQQVQVIGVAEAHQGYAKQVVEALQQAEIRVQLDDRQEKLGKKIREAQLQK 589

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           IP I++ GD+E + +++ +RR G       SL   I  +T
Sbjct: 590 IPYIVVIGDREVANQTVAVRRHGQQNANDKSLQQLIEEVT 629


>gi|303242609|ref|ZP_07329085.1| threonyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
 gi|302589866|gb|EFL59638.1| threonyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
          Length = 635

 Score =  592 bits (1525), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 299/642 (46%), Positives = 422/642 (65%), Gaps = 16/642 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           IK+T  DGS+K +    T  +VAESIS  LA+ A+A  ++GKV DLS  + E   + ++T
Sbjct: 2   IKITLKDGSVKEYNKGITIKEVAESISAGLARVALAGEVDGKVKDLSYELNEDCKLSLMT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D       RH+ +HIMA+AV++++P V++AIGP I++G+YYDFD E+PFS +ELAQIE
Sbjct: 62  FDDEGGRHAYRHTTSHIMAQAVKNLYPNVKLAIGPAIDNGYYYDFDVEKPFSVEELAQIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           ++M++I+  D    +  L  ++A +  E K E YKVE++  +P  E ++ Y+QG++ DLC
Sbjct: 122 EEMKKIVKEDLKLERFTLPRDEAIKFMEEKGEPYKVELIRDLPEGEIISFYKQGDFVDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+ STG++K F KL+ VAGAYWRG+    ML RIYGTA++ + +L  YL+ LEE++K
Sbjct: 182 AGPHLESTGKIKAF-KLLSVAGAYWRGNEKNKMLQRIYGTAFSKKSDLDDYLFRLEEAKK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +E+DLF I E+G G  F+  KG  +   L +Y R + K   Y+EI TP +L++
Sbjct: 241 RDHRKLGKELDLFDIYEEGPGFPFFMPKGMMLRNLLENYWREEHKARGYQEIRTPIILNE 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW +SGHWD Y+ NM+  K       D   +A+KPMNCPG + V+   L SYR+LP R+
Sbjct: 301 DLWHRSGHWDHYKENMYFTKI------DEGDYAIKPMNCPGGMLVYKRKLHSYRDLPQRM 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AE G V+R+E SG+LHGLMRVR FTQDDAH+F T EQ+ +E L + NLI   Y  FGF K
Sbjct: 355 AELGLVHRHELSGALHGLMRVRCFTQDDAHIFMTPEQIKDEVLGVINLIDDFYNVFGF-K 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +GSD  W+ A N ++  LD  K      +N  V  G+GAFYGPK ++ 
Sbjct: 414 YHVELSTRPEDSMGSDEQWEMATNALRDALDARK------MNYKVNEGDGAFYGPKIDFH 467

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+D+IGR WQCGTIQ+DF +P RF+  YV +  EK  PVMIHR VFGSIERFI I+ E+F
Sbjct: 468 LEDSIGRTWQCGTIQLDFQMPQRFDLNYVGADGEKHRPVMIHRVVFGSIERFIAILTEHF 527

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WLSP+Q  +  +     ++A E+   L++  + +E D RNE I YKIRE  ++K
Sbjct: 528 AGAFPTWLSPVQVKILPLIDKHHQFAGEVKAALEAKGVRVEVDLRNEKIGYKIREAQLEK 587

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            P +++ GDKE    ++ +R         ++L D +  + +E
Sbjct: 588 TPYMLVIGDKELENGAVAVRSRKDGDLGSMALNDFVNKIVEE 629


>gi|187776940|ref|ZP_02993413.1| hypothetical protein CLOSPO_00484 [Clostridium sporogenes ATCC
           15579]
 gi|187775599|gb|EDU39401.1| hypothetical protein CLOSPO_00484 [Clostridium sporogenes ATCC
           15579]
          Length = 635

 Score =  592 bits (1525), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 296/642 (46%), Positives = 422/642 (65%), Gaps = 16/642 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           IK+T  DG +  F      SD+A  IS +L KKA+A  I+G+  DL   + ++ S+EI+T
Sbjct: 2   IKITLKDGKVMEFEEGIKISDIAMKISPALYKKALAAKIDGETVDLMTELHKDSSLEILT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            ED      +RH+ +H++A+AV+ ++PEV++AIGP I+ GFYYDF+ +  F+ + L +IE
Sbjct: 62  FEDEMGKWALRHTGSHMLAQAVKRLYPEVKLAIGPAIDTGFYYDFEADFTFTPEMLEKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            ++++II  +    +  L  E+A +L + K E YKVE++E +P  E ++ Y+QG++ DLC
Sbjct: 122 AEIKKIIKENHKLERFELPREEAIKLMKEKNEDYKVELIEDLPEGEVISFYKQGDFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPHV STG+VK   KL+ +AGAYWRGD N  ML RIYGTA+  + EL +YL  LEE++K
Sbjct: 182 AGPHVPSTGKVKSV-KLLSLAGAYWRGDENNKMLQRIYGTAFTKKSELDEYLNMLEEAKK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQ 302
           RDHRKL +E+DLF I E+G G  F+H KG  +   L S+ R +  K  Y+EI TP +L++
Sbjct: 241 RDHRKLGKELDLFSIHEEGPGFPFFHPKGMIVRNILESFWREEHTKAGYQEIRTPLILNE 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW QSGHWD Y+ NM+     D        +A+KPMNCPG + V+ + + SYR+LP+RL
Sbjct: 301 ALWHQSGHWDHYKENMYFTNIDDGD------YAIKPMNCPGGILVYKNSMHSYRDLPLRL 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           +E G V+R+E SG+LHGLMRVR FTQDDAH++ TKEQ+  E + I  LI   YK FGFE 
Sbjct: 355 SELGIVHRHELSGALHGLMRVRCFTQDDAHLYMTKEQIKEEVVGIIKLIDKFYKLFGFE- 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +GSD  W+ A N ++  LD+I    + R+N G    +GAFYGPK ++ 
Sbjct: 414 YFVELSTRPEDSMGSDEDWEIATNGLREALDSI--GKEYRVNEG----DGAFYGPKIDFH 467

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LKD IGR WQCGTIQ+DF +P RF+  Y+ +  EK  PVM+HR ++GS+ERFIGI+IE +
Sbjct: 468 LKDCIGRTWQCGTIQLDFQMPERFDLSYIGADGEKHRPVMVHRTIYGSVERFIGILIEQY 527

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P+Q  +  IT S  +Y +++   LK +++ +E D RNE I YKIRE  ++K
Sbjct: 528 AGAFPTWLAPVQVKLMNITDSQYDYLKKVEETLKENNIRVEIDTRNEKIGYKIREAQLQK 587

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P ++I GDKE     + +R         +SL + I  +  E
Sbjct: 588 VPYMLILGDKEVEAGKVAVRSRKDGDLGAISLEEFIEKIKNE 629


>gi|168183457|ref|ZP_02618121.1| threonine--tRNA ligase [Clostridium botulinum Bf]
 gi|237796594|ref|YP_002864146.1| threonyl-tRNA synthetase [Clostridium botulinum Ba4 str. 657]
 gi|259516348|sp|C3KTK0|SYT_CLOB6 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|182673322|gb|EDT85283.1| threonine--tRNA ligase [Clostridium botulinum Bf]
 gi|229263282|gb|ACQ54315.1| threonine--tRNA ligase [Clostridium botulinum Ba4 str. 657]
          Length = 635

 Score =  592 bits (1525), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 297/642 (46%), Positives = 421/642 (65%), Gaps = 16/642 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           IK+T  DG +  F      SD+A  IS +L KKA+A  I+G+  DL   + ++ S+EI+T
Sbjct: 2   IKITLKDGKVMEFEEGIKISDIAMKISPALYKKALAAKIDGETVDLMTELHKDSSLEILT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            ED      +RH+ AHI+A+AV+ ++PEV++AIGP I+ GFYYDF+ +  F+ + L +IE
Sbjct: 62  FEDEMGKWALRHTGAHILAQAVKRLYPEVKLAIGPAIDTGFYYDFEADFTFTPEMLEKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            ++++II  +    +  L  E+A  L + K E YKVE++E +P  E ++ Y+QG++ DLC
Sbjct: 122 AEIKKIIKENHKLERFELPREEAINLMKEKNEDYKVELIEDLPEGEVISFYKQGDFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPHV STG+VK   KL+ +AGAYWRGD N  ML RIYGTA+  + EL +YL  LEE++K
Sbjct: 182 AGPHVPSTGKVKSV-KLLSLAGAYWRGDENNKMLQRIYGTAFTKKSELDEYLNMLEEAKK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQ 302
           RDHRKL +E+DLF I E+G G  F+H KG  I   L ++ R +  K  Y+EI TP +L++
Sbjct: 241 RDHRKLGKELDLFSIHEEGPGFPFFHPKGMIIRNILENFWREEHTKAGYQEIRTPLILNE 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW QSGHWD Y+ NM+     D        +A+KPMNCPG + V+ + + SYR+LP+RL
Sbjct: 301 ALWHQSGHWDHYKENMYFTNIDDGD------YAIKPMNCPGGILVYKNSMHSYRDLPLRL 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           +E G V+R+E SG+LHGLMRVR FTQDDAH++ TKEQ+  E + I  LI   YK FGFE 
Sbjct: 355 SELGIVHRHELSGALHGLMRVRCFTQDDAHLYMTKEQIKEEIVGIIKLIDKFYKLFGFE- 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +GSD  W+ A N ++  LD+I    + R+N G    +GAFYGPK ++ 
Sbjct: 414 YFVELSTRPEDSMGSDEDWEIATNGLREALDSI--GKEYRVNEG----DGAFYGPKIDFH 467

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LKD IGR WQCGTIQ+DF +P RF+  Y+ +  EK  PVM+HR ++GS+ERFIGI+IE +
Sbjct: 468 LKDCIGRTWQCGTIQLDFQMPERFDLSYIGADGEKHRPVMVHRTIYGSVERFIGILIEQY 527

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P+Q  +  IT +  +Y +++   LK +++ +E D RNE I YKIRE  ++K
Sbjct: 528 AGAFPTWLAPVQVKLMNITDAQYDYLKKVEEALKENNIRVEIDTRNEKIGYKIREAQLQK 587

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P ++I GDKE     + +R         +SL + I  +  E
Sbjct: 588 VPYMLILGDKEVEAGKVAVRSRKDGDLGAISLEEFIEKIKNE 629


>gi|134299469|ref|YP_001112965.1| threonyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
 gi|189083605|sp|A4J4Y7|SYT_DESRM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|134052169|gb|ABO50140.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase
           [Desulfotomaculum reducens MI-1]
          Length = 635

 Score =  591 bits (1524), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 291/636 (45%), Positives = 423/636 (66%), Gaps = 16/636 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+T  DGS++ + V  T  +VA+SIS+ LA++A+A  +NGK+ DL  P++E  ++E++T
Sbjct: 2   IKITLKDGSVREYAVGTTVLEVAKSISQGLAREALAGKVNGKIVDLEYPLKEDAALELLT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
             D     V RHS AH++A+AV+ ++P+ ++AIGP I+DG+YYDFD EQPF+  +L +IE
Sbjct: 62  FNDEEGKTVYRHSTAHVLAQAVKRLFPDAKLAIGPAIQDGYYYDFDVEQPFTPAQLERIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           ++M +II  D PF +  LS E+A E F+ + E YK+E++  +P    ++ Y+QG++ DLC
Sbjct: 122 EEMNKIIKEDIPFKRVELSREEALEHFKKQDEIYKIELITDLPEDAVISCYQQGDFDDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPHV STG++K   KLM +AGAYWRG     ML RIYGT++  +  L ++L+ +EE+++
Sbjct: 182 AGPHVPSTGRLKSL-KLMSIAGAYWRGSEKNKMLQRIYGTSFPKKAMLDEHLFRIEEAKR 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +E+DLF I E+G G  F+H KG  +   L ++ R++ K   Y+EI TP +L++
Sbjct: 241 RDHRKLGQELDLFSIQEEGPGFPFFHPKGMVLRNELENFWRQEHKKRGYQEIRTPIILNR 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            +W+QSGHW  Y+ NM+  K       D   +A+KPMNCPG + V+   + SYR+LP+R 
Sbjct: 301 SMWEQSGHWAHYKDNMYFTKI------DEADYAVKPMNCPGSILVYKTRMHSYRDLPLRW 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            E G V+R+E SG+LHGLMRVR FTQDDAH+F    Q+ +E + + +L    Y  FG   
Sbjct: 355 GELGLVHRHELSGALHGLMRVRCFTQDDAHIFMLPSQIKDEIIGVIDLFDYFYNTFGL-N 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPEK +GSD +W+ A N ++  L+  K      ++  V  G+GAFYGPK ++ 
Sbjct: 414 YHVELSTRPEKSMGSDEMWEVATNSLRDALEAKK------MDYKVNEGDGAFYGPKIDFH 467

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D++GR WQCGTIQ+DF +P RFN  YV    +K  PVMIHR VFGSIERFIGI+ E+F
Sbjct: 468 LTDSLGRTWQCGTIQLDFQMPERFNLNYVGEDGQKHRPVMIHRVVFGSIERFIGILTEHF 527

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P+WL+P+Q  V  IT    EYA+E+   L+   + +E D RNE INYKIRE   +K
Sbjct: 528 AGAFPVWLAPVQVKVLPITDRHHEYARELVKRLQGLDIRVELDARNEKINYKIREAQTQK 587

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           IP +++ GD+E  + ++ +R  G      +S+ D I
Sbjct: 588 IPYMLVIGDREMEQGAVAVRERGKGDVGAISVGDFI 623


>gi|257465911|ref|ZP_05630222.1| threonyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
 gi|315917067|ref|ZP_07913307.1| threonine-tRNA ligase [Fusobacterium gonidiaformans ATCC 25563]
 gi|313690942|gb|EFS27777.1| threonine-tRNA ligase [Fusobacterium gonidiaformans ATCC 25563]
          Length = 637

 Score =  591 bits (1524), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 306/644 (47%), Positives = 428/644 (66%), Gaps = 19/644 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K+ F DG ++ F        VA+SIS SLAKKAVA  I+G++ D+S  +  +  +E I 
Sbjct: 1   MKIEFLDGKVQEFHEACNMFVVAKSISNSLAKKAVAAKIDGELYDMSYVLDHDAKVEFIM 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           PE    + VIRHS AH+MA+AV  ++P  +V IGP IE+GFYYDFD ++ F+ ++L +IE
Sbjct: 61  PESEEGVEVIRHSAAHLMAQAVIRLFPGTKVTIGPAIENGFYYDFDPKEQFTEEDLTRIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           ++M+++   D    +  +S E+A E FE   E YKVEI++ I   E ++ YRQG++ DLC
Sbjct: 121 EEMKKLSKEDIKVERFMMSREEAIEYFEKLGEHYKVEIIKEIAKGEQLSFYRQGDFVDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV STG +K   KL  VAGAYWRGDS   ML RIYG A+ T+++L  +L  +EE+EK
Sbjct: 181 RGPHVPSTGHIKAV-KLKSVAGAYWRGDSKNKMLQRIYGYAFATEKDLKDFLKLMEEAEK 239

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQ 302
           RDHRKL +E++LF ++E G G  F+  KG  +  TLI   R +  K  Y +I+TP +L++
Sbjct: 240 RDHRKLGKELELFFLSEYGPGFPFFLPKGMVLRNTLIDLWRAEHEKAGYVQIDTPIMLNR 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW +YR NM+       +I D+  FA+KPMNCPG V  F +   SYR+LP R+
Sbjct: 300 ELWEISGHWFNYRENMYT-----SSIDDV-DFAIKPMNCPGGVLAFKYQQHSYRDLPARV 353

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY-KDFGFE 421
           AE G V+R+E SG+LHGL RVR FTQDD+H+F T+EQ+ +E + + NLI   Y K FGF+
Sbjct: 354 AELGKVHRHEFSGALHGLFRVRAFTQDDSHIFMTEEQIESEIIGVVNLIDKFYSKLFGFQ 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              ++LSTRPEK +G+D +W+ AE  + G L+ +    + +IN G    +GAFYGPK ++
Sbjct: 414 -YSIELSTRPEKSIGTDEIWEKAETALAGALNHL--GREFKINEG----DGAFYGPKLDF 466

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDAIGR WQCGTIQ+DFNLP RF+  Y+    EK  PVMIHR ++GSIERFIGI+IE+
Sbjct: 467 KIKDAIGRTWQCGTIQLDFNLPERFDVTYIGEDGEKHRPVMIHRVIYGSIERFIGILIEH 526

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  P+WL+P+Q  V TI      YA+E+   LK+  +  E D R+E+I YKIRE + +
Sbjct: 527 YAGAFPMWLAPVQVKVLTINDECAPYAKEVVAQLKAQGIRAELDDRSESIGYKIREANGR 586

Query: 602 -KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            KIP+ +I G  E  +R + +RRFGS   + +  LDA   + KE
Sbjct: 587 YKIPMQVIIGKNEIEKREVNVRRFGSQAQESME-LDAFLAMVKE 629


>gi|269123175|ref|YP_003305752.1| threonyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
 gi|268314501|gb|ACZ00875.1| threonyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
          Length = 633

 Score =  591 bits (1523), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 309/647 (47%), Positives = 432/647 (66%), Gaps = 28/647 (4%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K+T PDG++K    + T  + A++IS SLAKK V    NG   D++  + ++G++E+IT
Sbjct: 2   LKITLPDGALKEVE-NMTVIEFAKTISTSLAKKTVGAFFNGTQVDITYNLDKDGTLELIT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +  + L ++RHS AH+MAEAV S++P  +V IGP IE+GFYYDFD E+PF+ ++L +IE
Sbjct: 61  TDSKKGLEILRHSSAHVMAEAVMSLFPNTKVTIGPAIENGFYYDFDTERPFTEEDLVKIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M++II  +  F ++  S EKAR  FE+  + YKVEIL+S+   E  T+Y QG++ DLC
Sbjct: 121 KEMKKIIKLNEKFSREVWSREKARAYFENAGQNYKVEILDSLEEDE-FTIYTQGKFVDLC 179

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RG HV STG +K F KL+  AGAYWRGDSN  ML RIYGT++ +Q EL  Y+  +EE+EK
Sbjct: 180 RGTHVPSTGYIKAF-KLLNAAGAYWRGDSNNKMLQRIYGTSFYSQDELDAYIKQVEEAEK 238

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQ 302
           RDHRKL ++++LF I E G G  F+  KG ++F  L    R    K  Y+EI TP +LD+
Sbjct: 239 RDHRKLGKQLNLFFIDEHGPGFPFFMPKGMRLFNRLQQLWRIEHNKQGYDEIRTPIMLDK 298

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW +YR NM+  +       D + +A+KPMNCPG +  + + L SY++LP++ 
Sbjct: 299 ELWEISGHWFNYRENMYVSEI------DEKVYAIKPMNCPGSIIAYKNNLHSYKDLPLKY 352

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AE G V+R+E SG+LHGLMRVR FTQDDAHVFCT +Q+ +   +I NL    YK FGF+ 
Sbjct: 353 AEMGHVHRHEFSGALHGLMRVRAFTQDDAHVFCTPDQIKDSIKEIVNLYDKYYKLFGFD- 411

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD-RINTGVLLGEGAFYGPKFEY 481
             V+LST+PEK VG   +W+ +E  ++   +T+K  + D RIN G    +GAFYGPK ++
Sbjct: 412 FHVELSTKPEKAVGDAKVWEISERALE---ETLKELNIDYRINAG----DGAFYGPKIDF 464

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KD+IGR WQ GTIQ+D NLP RFN  Y+    EK   VMIHRA+FGS+ERFIGI+IE+
Sbjct: 465 KMKDSIGRIWQTGTIQLDMNLPKRFNMSYIGKDGEKHETVMIHRAMFGSLERFIGILIEH 524

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE-HSI 600
           + G  P+WL+P Q  + TI++  VEYA ++   L    +  E D R+E I YKIRE +  
Sbjct: 525 YAGAFPVWLAPTQVKIMTISAEQVEYATKLHKKLIDLGIYSELDIRDEKIGYKIREANGE 584

Query: 601 KKIPIIIICGDKEASERSIGIRRFGST--TTQKVS-----LLDAIPI 640
           +KIP+ ++ G  E  E ++ +RRFGST   T+ V      LLD I I
Sbjct: 585 QKIPVQLVIGKNEVLENTVNVRRFGSTDSVTKNVDEFINELLDEINI 631


>gi|168179213|ref|ZP_02613877.1| threonyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
 gi|182670074|gb|EDT82050.1| threonyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
          Length = 635

 Score =  591 bits (1523), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 296/642 (46%), Positives = 422/642 (65%), Gaps = 16/642 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           IK+T  DG +  F      SD+A  IS +L KKA+A  I+G+  DL   + ++ S+EI+T
Sbjct: 2   IKITLKDGKVMEFEEGIKISDIAMKISPALYKKALAAKIDGETVDLMTELHKDSSLEILT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D      +RH+ AHI+A+AV+ ++PEV++AIGP I+ GFYYDF+ +  F+ + L +IE
Sbjct: 62  FKDEMGKWALRHTGAHILAQAVKRLYPEVKLAIGPAIDTGFYYDFEADFTFTPEMLEKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            ++++II  +    +  L  E+A +L + K E YKVE++E +P  E ++ Y+QG++ DLC
Sbjct: 122 AEIKKIIKENHKLERFELPREEAIKLMKEKNEDYKVELIEDLPEGEVISFYKQGDFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPHV STG+VK   KL+ +AGAYWRGD    ML RIYGTA+  + EL +YL  +EE++K
Sbjct: 182 AGPHVPSTGKVKSV-KLLSLAGAYWRGDEKNKMLQRIYGTAFTKKSELDEYLNMIEEAKK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQ 302
           RDHRKL +E+DLF I E+G G  F+H KG  +   L S+ R +  K  Y+EI TP +L++
Sbjct: 241 RDHRKLGKELDLFSIHEEGPGFPFFHPKGMIVRNILESFWREEHTKAGYQEIRTPLILNE 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW QSGHWD Y+ NM+     DD       +A+KPMNCPG + V+ + + SYR+LP+RL
Sbjct: 301 ALWHQSGHWDHYKENMYFTNIDDDD------YAIKPMNCPGGILVYKNSMHSYRDLPLRL 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           +E G V+R+E SG+LHGLMRVR FTQDDAH++ TKEQ+  E + I  LI   YK FGFE 
Sbjct: 355 SELGIVHRHELSGALHGLMRVRCFTQDDAHLYMTKEQIKEEVVGIIKLIDKFYKLFGFE- 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +GSD  W+ A N ++  LD+I    + R+N G    +GAFYGPK ++ 
Sbjct: 414 YFVELSTRPEDSMGSDEDWEIATNGLREALDSI--GKEYRVNEG----DGAFYGPKIDFH 467

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LKD IGR WQCGTIQ+DF +P RF+  Y+ +  EK  PVM+HR ++GS+ERFIGI+IE +
Sbjct: 468 LKDCIGRTWQCGTIQLDFQMPERFDLSYIGADGEKHRPVMVHRTIYGSVERFIGILIEQY 527

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P+Q  +  IT S  +Y +++   LK +++ +E D RNE I YKIRE  ++K
Sbjct: 528 AGAFPTWLAPVQVKLMNITDSQYDYLKKVEEALKENNIRVEIDTRNEKIGYKIREAQLQK 587

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P ++I GDKE     + +R         +SL + I  +  E
Sbjct: 588 VPYMLILGDKEVEAGKVAVRSRKDGDLGAISLEEFIEKIKNE 629


>gi|222056447|ref|YP_002538809.1| threonyl-tRNA synthetase [Geobacter sp. FRC-32]
 gi|221565736|gb|ACM21708.1| threonyl-tRNA synthetase [Geobacter sp. FRC-32]
          Length = 645

 Score =  591 bits (1523), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 293/646 (45%), Positives = 427/646 (66%), Gaps = 20/646 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEI 61
            +I +  PDGS +  P  A+  D+A SI   LAK A+A  I+G + DL+  + +GS +EI
Sbjct: 11  GEITVKLPDGSERTLPRGASVYDLAASIGTGLAKAAIAGRIDGDLVDLATVLPDGSKVEI 70

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           IT + P +L +IRHS +H+MA+AV++++PE +V IGP IE GFYYDFD + PF+ ++L +
Sbjct: 71  ITEKSPEALEIIRHSTSHLMAQAVKALFPEAKVTIGPAIETGFYYDFDVDHPFTPEDLEK 130

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE KMQE+   +    +Q LS   A  LF    E+YKVE++E + A   V+LYRQG++ D
Sbjct: 131 IENKMQELAKANLKIERQVLSGADAIRLFGDLGESYKVELIEDLGAA-TVSLYRQGDFVD 189

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ ST  +K F KL  +AGAYWRGD  R ML R+YGTA+  ++EL  YL  +EE+
Sbjct: 190 LCRGPHLPSTSHIKAF-KLTSIAGAYWRGDEKRKMLQRVYGTAFTDKKELDAYLARIEEA 248

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQV 299
           ++RDHRKL +E+DLF  +++ G+G++ WH KG  +   +  + RR+ +K DY+ +  PQ+
Sbjct: 249 KRRDHRKLGKELDLFSFSDEVGAGLVIWHPKGAMLRTIIEDFERREHLKRDYDIVVGPQI 308

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           L   LWQ+SGH+D+YR NM+  +       D ++F +KPMNC  H+ ++   L+SYR+LP
Sbjct: 309 LKTDLWQRSGHYDNYRENMYFTEV------DEQSFGIKPMNCLSHMMIYKSRLRSYRDLP 362

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +RL E G+V+R+E +G LHGL+RVR FTQDDAH+ CT EQ+ +E   + + +  +   FG
Sbjct: 363 LRLFELGTVHRHERAGVLHGLLRVRCFTQDDAHILCTPEQLDSEIKGVISFVQDVMGVFG 422

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD-RINTGVLLGEGAFYGPK 478
           FE  M +LSTRPEK +GSD  WD A N + G L   K+S +   IN G    +GAFYGPK
Sbjct: 423 FEFEM-ELSTRPEKSIGSDEDWDRATNALLGAL---KDSGRPFEINEG----DGAFYGPK 474

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +  L+D++ R WQC TIQ DF LP RF+  Y+++  EK  PVM+HR + GSIERFIG++
Sbjct: 475 IDIKLRDSLDRRWQCATIQCDFTLPERFDLTYIDADGEKKRPVMVHRVILGSIERFIGVL 534

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+F G+ P+WLSP+Q +V T+T + + +AQ++   L++  L ++ DFRNE + +KIRE 
Sbjct: 535 IEHFAGSFPVWLSPVQVVVLTVTDNQLSFAQQVYAELRAAGLRVQQDFRNEKLGFKIREA 594

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            ++KIP +++ GDKE     +  R         +   D I  + KE
Sbjct: 595 QLQKIPYMLVIGDKEVEAGMVTPRFRDGKNLDSMKCSDFIEFIEKE 640


>gi|169828188|ref|YP_001698346.1| threonyl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
 gi|168992676|gb|ACA40216.1| Threonyl-tRNA synthetase 2 [Lysinibacillus sphaericus C3-41]
          Length = 637

 Score =  590 bits (1522), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 288/642 (44%), Positives = 425/642 (66%), Gaps = 22/642 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           I + FPDG  + F    T +++A++I   L KKAVA ++NG + DL+ P+ E   I +  
Sbjct: 6   IHIQFPDGQQQAFTKGVTLTEIAQAIRPELRKKAVAGSVNGTIVDLTRPIMEDAQITLYD 65

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
                 + VIRHS AH++A+AV+ ++P  +  +GP+IE+GFYYD D     +  +L QIE
Sbjct: 66  ASSKEGIEVIRHSTAHLLAQAVKRLYPHARFGVGPVIENGFYYDIDIADTLTPSDLQQIE 125

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K M++I+  +    ++ +S  +A++LF    +A K+E+LESIPA E VT+Y QGE++DLC
Sbjct: 126 KTMKQIVRENVQIKRREVSRNEAKKLF--AHDALKLELLESIPADETVTIYEQGEFYDLC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RG HV STG+++ F +LM V+GAYWRGDSN  ML RIYG A+ T++EL +Y  FLEE+EK
Sbjct: 184 RGSHVPSTGKLQHF-QLMHVSGAYWRGDSNNQMLQRIYGVAFATKEELQKYFVFLEEAEK 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           R+HRKL +E+ LF  +E+  G+ F+   G  +   L SY+R  + K DY+E+ TP +++Q
Sbjct: 243 RNHRKLGKELSLFMFSEEAPGMPFYLANGQILRNELESYLRNLQAKYDYQEVRTPLMMNQ 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+QSGHWD Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYR+LP+R+
Sbjct: 303 RLWEQSGHWDHYKDNMYFTQV------DNQSFALKPMNCPGHMLIFKNNLHSYRDLPIRM 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFG V+R+E SG+L+GL+RVR F QDDAH+F T +Q+ +E     N+I  +Y  FGF+ 
Sbjct: 357 AEFGQVHRHEFSGALNGLLRVRSFCQDDAHIFATPQQIEDEIALALNIIDEVYDVFGFQ- 415

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRP+  +G  ALWD AE  ++ VL  +       I+  +  G+GAFYGPK +  
Sbjct: 416 YTVELSTRPDDYMGELALWDQAEEALENVLLNLG------IDYTINEGDGAFYGPKIDIH 469

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDAI R  QC T+Q+DF LP +F+  Y+N H+EK  P++IHRAVFGSI+RF+GI+IE+F
Sbjct: 470 IKDAIQRSHQCATVQLDFQLPEKFDLTYINEHNEKVRPIVIHRAVFGSIDRFLGILIEHF 529

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P+WL+P Q  V  +  +  +YA ++   L+   + ++ D R E +  KIRE  + K
Sbjct: 530 GGAFPIWLAPQQVQVIAVADAHQDYAIQVVKALQHEQIRVQIDDRQEKLGKKIREAQLHK 589

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IP II+ GD+E + +++ +RR G    Q+ S+   +  L KE
Sbjct: 590 IPYIIVIGDRETANQNVSVRRHG----QQASVEYTVSQLMKE 627


>gi|257452295|ref|ZP_05617594.1| threonyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|317058838|ref|ZP_07923323.1| threonyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|313684514|gb|EFS21349.1| threonyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
          Length = 637

 Score =  590 bits (1522), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 306/644 (47%), Positives = 427/644 (66%), Gaps = 19/644 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K+ F DG ++ F        VA+SIS SLAKKAVA  I+G++ D+S  +  +  +E I 
Sbjct: 1   MKIEFLDGKVQEFHEACNMFVVAKSISNSLAKKAVAAKIDGELYDMSYVLDHDAKVEFIM 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           PE    + VIRHS AH+MA+AV  ++P  +V IGP IE+GFYYDFD ++ F+ ++L +IE
Sbjct: 61  PESEEGVEVIRHSAAHLMAQAVIRLFPGTKVTIGPAIENGFYYDFDPKEQFTEEDLIRIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           ++M+++   D    +  +S E+A E FE   E YKVEI++ I   E ++ YRQG++ DLC
Sbjct: 121 EEMKKLSKEDIKVERFMMSREEAIEYFEKLGENYKVEIIKEIAKGEQLSFYRQGDFVDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV STG +K   KL  VAGAYWRGDS   ML RIYG A+ T+++L  +L  +EE+EK
Sbjct: 181 RGPHVPSTGHIKAV-KLKSVAGAYWRGDSKNKMLQRIYGYAFATEKDLKDFLRLMEEAEK 239

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQ 302
           RDHRKL +E++LF ++E G G  F+  KG  +  TLI   R +  K  Y +I+TP +L++
Sbjct: 240 RDHRKLGKELELFFLSEYGPGFPFFLPKGMVLRNTLIDLWRAEHEKAGYVQIDTPIMLNR 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW +YR NM+       +I D+  FA+KPMNCPG V  F +   SYR+LP R+
Sbjct: 300 ELWEISGHWFNYRENMYT-----SSIDDV-DFAIKPMNCPGGVLAFKYQQHSYRDLPARV 353

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY-KDFGFE 421
           AE G V+R+E SG+LHGL RVR FTQDD+H+F T+EQ+ +E + + NLI   Y K FGF+
Sbjct: 354 AELGKVHRHEFSGALHGLFRVRAFTQDDSHIFMTEEQIESEIIGVVNLIDKFYSKLFGFQ 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              ++LSTRPEK +G+D +W+ AE  + G L+ +    + +IN G    +GAFYGPK ++
Sbjct: 414 -YSIELSTRPEKSIGTDEIWEKAETALAGALNHL--GREFKINEG----DGAFYGPKLDF 466

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDAIGR WQCGTIQ+DFNLP RF+  Y+    EK  PVMIHR ++GSIERFIGI+IE+
Sbjct: 467 KIKDAIGRTWQCGTIQLDFNLPERFDVTYIGEDGEKHRPVMIHRVIYGSIERFIGILIEH 526

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  P+WL+P+Q  V TI      YA+E+   LK   +  E D R+E+I YKIRE + +
Sbjct: 527 YAGAFPMWLAPVQVKVLTINDECAPYAKEVVAQLKEQGIRAELDDRSESIGYKIREANGR 586

Query: 602 -KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            KIP+ +I G  E  +R + +RRFGS   + +  LDA   + KE
Sbjct: 587 YKIPMQVIIGKNEIEKREVNVRRFGSQAQESME-LDAFLAMVKE 629


>gi|300856610|ref|YP_003781594.1| threonyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
 gi|300436725|gb|ADK16492.1| threonyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
          Length = 637

 Score =  590 bits (1522), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 297/643 (46%), Positives = 420/643 (65%), Gaps = 18/643 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           IK+   DG           +DVA  +S SL KKA+   INGKV +L+  + E   +EI+T
Sbjct: 2   IKIVLKDGKELEVEKGLKVADVAAKLSTSLGKKALGAKINGKVEELNKEINEDCKLEILT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            ED     ++RH+ +HI+A+AV+ ++PEV++AIGP I+DGFYYD D +  F+ + L +IE
Sbjct: 62  FEDEDGKKILRHTGSHILAQAVKRLYPEVKLAIGPSIDDGFYYDMDADFSFTPELLEKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M +II  +    +  L+ ++A +L E K E YKV++++ +P  E ++ Y+QG++ DLC
Sbjct: 122 GEMNKIIKENEKLERFELTRDEAVKLMEEKNEPYKVQLIKDLPEDEIISFYKQGDFVDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPHV STG+VK   KL+ +AGAYWRG+    ML RIYGTA+  + +L  YL  +EE++K
Sbjct: 182 AGPHVPSTGKVK-VVKLLSIAGAYWRGNEKNKMLQRIYGTAFEKKNDLKDYLTMMEEAKK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           RDHRKL +E+DLF I E+G G  F+H KG  I   L +Y R+   K  Y+EI TP +L++
Sbjct: 241 RDHRKLGKELDLFSIHEEGPGFPFFHPKGMIIRNELQNYWRQVHHKAGYDEIMTPIILNE 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW QSGHWD Y+ NM+  K  D+       +A+KPMNCPG + V+ + + SYR+LP+R 
Sbjct: 301 ELWHQSGHWDHYKENMYFTKIDDED------YAIKPMNCPGSILVYKNKIHSYRDLPIRY 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            E G V+R+E SG+LHGLMRVR FTQDDAH+F TK+ M +E + +  LI S YK F FE 
Sbjct: 355 GEMGIVHRHEKSGALHGLMRVRCFTQDDAHIFMTKDNMKDEIVNVIKLIDSFYKVFKFE- 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD-RINTGVLLGEGAFYGPKFEY 481
             V+LSTRPE  +GSD  W+ A    +G+ D +K    D ++N G    +GAFYGPK ++
Sbjct: 414 YFVELSTRPEDSMGSDEDWEAA---TEGLKDALKAVGLDYKVNEG----DGAFYGPKIDF 466

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            LKD+IGR WQCGT+Q+DF +P RF+  YV +  EK  PVM+HR VFGSIERFIGI+IEN
Sbjct: 467 HLKDSIGRTWQCGTVQLDFQMPERFDLTYVGADGEKHRPVMVHRVVFGSIERFIGILIEN 526

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  P WL+P+Q  V  IT +  +Y  E+   LK + + +E+D RNE I YKIRE  ++
Sbjct: 527 YAGAFPAWLAPVQVEVMNITDAQDDYVNEVVEKLKENDIRVESDMRNEKIGYKIREAQMQ 586

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K+P +I+ G+KE  +++I +R         ++L D I  L  E
Sbjct: 587 KVPYMIVLGEKEMKDKTISVRSRKGGDMGTMALDDFISKLKDE 629


>gi|257463827|ref|ZP_05628214.1| threonyl-tRNA synthetase [Fusobacterium sp. D12]
 gi|317061364|ref|ZP_07925849.1| threonyl-tRNA synthetase [Fusobacterium sp. D12]
 gi|313687040|gb|EFS23875.1| threonyl-tRNA synthetase [Fusobacterium sp. D12]
          Length = 637

 Score =  590 bits (1521), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 306/645 (47%), Positives = 428/645 (66%), Gaps = 18/645 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K+ F DG+++ F        +A+SIS SLAKKAVA  I+G++ D+S  +  +  +E I 
Sbjct: 1   MKIEFLDGNVQEFQEACNMFVIAKSISNSLAKKAVAAKIDGELYDMSYILDHDAKVEFIM 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           PE    + VIRHS AH+MA+AV  ++P  +V IGP IE+GFYYDFD ++ F+ ++L +IE
Sbjct: 61  PESEEGVEVIRHSAAHLMAQAVIRLFPGTKVTIGPSIENGFYYDFDPKEQFTEEDLLKIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           ++M+ +   D    +  +S E+A E FE   E YKVEI++ I   E ++ YRQGE+ DLC
Sbjct: 121 EEMKRLSKEDIKVERFMMSREEAIEYFEKLGEHYKVEIIKDIAKGEQLSFYRQGEFVDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV STG +K   KL  VAGAYWRGDS   ML RIYG A+ T+++L  +L  +EE+EK
Sbjct: 181 RGPHVPSTGHIKAI-KLKSVAGAYWRGDSKNKMLQRIYGYAFATEKDLKDFLKLMEEAEK 239

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQ 302
           RDHRKL +E++LF ++E G G  F+  KG  +  TLI   R +  K  Y +I+TP +L++
Sbjct: 240 RDHRKLGKELELFFLSEYGPGFPFFLPKGMVLRNTLIDLWRAEHEKAGYVQIDTPIMLNR 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW +YR NM+       +I D+  FA+KPMNCPG V  F +   SYR+LP R+
Sbjct: 300 ELWEISGHWFNYRENMYT-----SSIDDV-DFAIKPMNCPGGVLAFKYQQHSYRDLPARV 353

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY-KDFGFE 421
           AE G V+R+E SG+LHGL RVR FTQDD+H+F T+EQ+ +E + + NLI   Y K FGF+
Sbjct: 354 AELGKVHRHEFSGALHGLFRVRAFTQDDSHIFMTEEQIESEIIGVVNLIDKFYSKLFGFQ 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              ++LSTRPEK +G+D +W+ AE  + G L  +    + +IN G    +GAFYGPK ++
Sbjct: 414 -YSIELSTRPEKSIGTDEIWEKAEAALAGALHHL--GREFKINEG----DGAFYGPKLDF 466

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDAIGR WQCGTIQ+DFNLP RF+  YV    EK  PVMIHR ++GSIERFIGI+IE+
Sbjct: 467 KIKDAIGRTWQCGTIQLDFNLPERFDVTYVGEDGEKHRPVMIHRVIYGSIERFIGILIEH 526

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  P+WL+P+Q  V TI    V YA+EI   LK   +  E D R+E+I YKIRE + +
Sbjct: 527 YAGAFPMWLAPVQIKVLTINDDCVSYAKEIVEKLKEQGIRAELDDRSESIGYKIREANGR 586

Query: 602 -KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
            KIP+ +I G  E  ++ + IRRFGS   + + L   + ++ +E+
Sbjct: 587 YKIPMQVIIGKNEIEKKEVNIRRFGSQAQESMDLNAFLAMVKEEA 631


>gi|125973743|ref|YP_001037653.1| threonyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|256005747|ref|ZP_05430701.1| threonyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|281417900|ref|ZP_06248920.1| threonyl-tRNA synthetase [Clostridium thermocellum JW20]
 gi|166223337|sp|A3DET1|SYT_CLOTH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|125713968|gb|ABN52460.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Clostridium
           thermocellum ATCC 27405]
 gi|255990281|gb|EEU00409.1| threonyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|281409302|gb|EFB39560.1| threonyl-tRNA synthetase [Clostridium thermocellum JW20]
 gi|316940063|gb|ADU74097.1| threonyl-tRNA synthetase [Clostridium thermocellum DSM 1313]
          Length = 635

 Score =  590 bits (1520), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 294/620 (47%), Positives = 411/620 (66%), Gaps = 16/620 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           IK+T  DGS++ +    T  +VAESIS  LA+ A+A  +NG+V DLS P+  + ++ ++T
Sbjct: 2   IKITLKDGSVREYNEGITIKEVAESISAGLARVALAGEVNGEVKDLSYPLENDCTLNLLT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D       RH+ +HI+A+AV+ ++P+ ++AIGP IE+GFYYDFD E+PFS ++L +IE
Sbjct: 62  FDDEGGRDAYRHTTSHILAQAVKRLYPDAKLAIGPAIENGFYYDFDVEKPFSVEDLEKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           ++M++II  D    +  L  E+A +  E + E YKVE++  +P  E ++ Y+QG++ DLC
Sbjct: 122 EEMKKIIKEDYKLERFTLPREEAIKFMEERNEPYKVELIRDLPEGETISFYKQGDFVDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+ STG+VK F KLM VAGAYWRG+    ML RIYGT++  + +L  Y+  +EE++K
Sbjct: 182 AGPHIESTGKVKAF-KLMSVAGAYWRGNEKNKMLQRIYGTSFTKKSDLDAYITRIEEAKK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQ 302
           RDHRKL RE+DLF I E+G G  F+  KG  +   L  Y R +  K  Y+EI TP +L++
Sbjct: 241 RDHRKLGRELDLFDIYEEGPGFPFFMPKGMVLRNVLEEYWREEHRKAGYQEIKTPIILNE 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW +SGHWD Y+ NM+  K       D   FA+KPMNCPG + V+   L SYR+LP RL
Sbjct: 301 ELWHRSGHWDHYKENMYFTKI------DEADFAIKPMNCPGGMLVYKRKLHSYRDLPQRL 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AE G V+R+E SG LHGLMRVR FTQDDAH+F T +Q+ +E L + +LI   YK FGF K
Sbjct: 355 AELGLVHRHELSGVLHGLMRVRCFTQDDAHIFMTPDQIESEILGVISLIDDFYKVFGF-K 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +GSD  W+ A N +K  L+  K     +IN G    +GAFYGPK ++ 
Sbjct: 414 YHVELSTRPENSMGSDEDWERATNALKNALE--KKGIDYKINEG----DGAFYGPKIDFH 467

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+D+IGR WQCGTIQ+DF +P RF+  Y+    EK  PVMIHR VFGSIERFI I+ E++
Sbjct: 468 LEDSIGRTWQCGTIQLDFQMPERFDLTYIGPDGEKHRPVMIHRVVFGSIERFIAILTEHY 527

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P+WLSP+Q  +  I     +Y  E+   L+   + +E D RNE I YKIRE  ++K
Sbjct: 528 AGAFPVWLSPVQVKILPILEKQHDYVAEVKKALEEKGVRVEADLRNEKIGYKIREAQLEK 587

Query: 603 IPIIIICGDKEASERSIGIR 622
           +P +++ GDKE   R++ +R
Sbjct: 588 VPYMLVIGDKEMENRTVAVR 607


>gi|255526047|ref|ZP_05392970.1| threonyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|255510233|gb|EET86550.1| threonyl-tRNA synthetase [Clostridium carboxidivorans P7]
          Length = 638

 Score =  589 bits (1519), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 288/620 (46%), Positives = 413/620 (66%), Gaps = 16/620 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           +K+T  DGS+         +DVA  +S SLAKKA+   I+G+  +L   V  +  +EI+T
Sbjct: 2   VKITLKDGSLIEVEKGTKVADVAAKLSTSLAKKALGAKIDGERAELMAEVNNDCKLEILT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D     ++RH+ +HI+A+AV+ ++PEV++AIGP I+ GFYYDFD E  F+ + L +IE
Sbjct: 62  FDDEDGKWILRHTGSHILAQAVKKVYPEVKLAIGPAIDTGFYYDFDAEFSFTPEMLEKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M +II  +    +  L  E+A +L + KKE YKVE+++ +P    ++ Y+QG++ DLC
Sbjct: 122 VEMNKIIKENLKLERFELPREEAIKLMQEKKECYKVELIKDLPEDAVISFYKQGDFVDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPHV STG+VK   KL+ +AGAYW+GD    ML RIYGTA+  + +L  YL  LEE++K
Sbjct: 182 AGPHVPSTGKVKAV-KLLSIAGAYWKGDEKNKMLQRIYGTAFEKKADLDAYLNMLEEAKK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           RDHRKL +E+DLF + E+G G  F+H KG  I  TL ++ R      DY+EI TP +L++
Sbjct: 241 RDHRKLGKELDLFSMHEEGPGFPFFHPKGMIIRNTLQNFWREMHSAADYDEIMTPVILNE 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+QSGHWD Y+ NM+  K       D   +A+KPMNCPG + V+ + + SYRELP+R 
Sbjct: 301 KLWRQSGHWDHYKENMYFTKI------DNEDYAIKPMNCPGSILVYKNTIHSYRELPLRY 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AE G  +R+E SG+LHGLMRVR FTQDDAH+F  K+ + +E + +  LI   YK FGFE 
Sbjct: 355 AEMGLAHRHEKSGALHGLMRVRCFTQDDAHMFLAKDNITDEIVNVIKLIDDFYKVFGFE- 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +GSD  W+ A N ++  LDTI    + ++N G    +GAFYGPK ++ 
Sbjct: 414 YFVELSTRPEDSMGSDEDWEAATNGLRKALDTI--GLKYKVNEG----DGAFYGPKIDFH 467

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+D IGR WQCGT+Q+DF +P RF+  Y+ +  EK  PVM+HR VFGS+ERFIGI+IE++
Sbjct: 468 LRDCIGRTWQCGTVQLDFQMPERFDLTYIGADGEKHRPVMVHRVVFGSVERFIGILIEHY 527

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P+Q  +  IT   ++YA ++A  LK + + +E D RNE I YKIRE  ++K
Sbjct: 528 AGAFPAWLAPVQVKIMNITDDQIDYANKVAKELKKNKIRVEVDLRNEKIGYKIREAQLQK 587

Query: 603 IPIIIICGDKEASERSIGIR 622
           +P +++ GDKE  E ++ +R
Sbjct: 588 VPYMLVLGDKEMKENTVAVR 607


>gi|332297469|ref|YP_004439391.1| threonyl-tRNA synthetase [Treponema brennaborense DSM 12168]
 gi|332180572|gb|AEE16260.1| threonyl-tRNA synthetase [Treponema brennaborense DSM 12168]
          Length = 583

 Score =  589 bits (1518), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 286/581 (49%), Positives = 397/581 (68%), Gaps = 20/581 (3%)

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           ++ E    LA+IRHS +H+MA+AV +++P  +VAIGP I++GFYYDF+  +P + ++LA 
Sbjct: 1   MSAEQKERLAMIRHSTSHVMAQAVLTLFPGSKVAIGPSIDNGFYYDFELTRPITQEDLAA 60

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK+M++I++ +  F ++ +S  +A ++F    + YKVE++  +PA E +++Y Q  + D
Sbjct: 61  IEKEMRKIVSGNHEFTRREVSRAEALKMFAD--QPYKVELINDLPADEPISVYTQAGFTD 118

Query: 182 LCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           LCRGPHV +T ++  + FKLMK AGAYWRGD  RPML+RIYGTAW    EL  Y+  L E
Sbjct: 119 LCRGPHVANTKEINAQSFKLMKTAGAYWRGDEKRPMLTRIYGTAWEKPVELKAYVDMLAE 178

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQV 299
           +E+RDHRK+ +EMDLFHI ED  G IFWH  GW I++ L  Y+R KIK D Y E+ TP V
Sbjct: 179 AERRDHRKIGKEMDLFHIDEDSPGQIFWHPNGWTIYRILEDYVRTKIKADGYVEVKTPFV 238

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           + Q LW++SGHW  Y+ NMF       T  + R FALKPMNCPGH+ +F   ++SY++LP
Sbjct: 239 MPQSLWERSGHWAKYKENMFI------TESEKRIFALKPMNCPGHIEIFKQRIRSYKDLP 292

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AEFGS  RNE SG+LHG+MRVRGF QDDAH+FCT+ Q+ +E  K  +L+  +YKDFG
Sbjct: 293 LRMAEFGSCTRNEASGALHGIMRVRGFVQDDAHIFCTEAQIPSEVAKFCHLLKDMYKDFG 352

Query: 420 F--EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           F  +KI+VK STRPEKRVG DA WD AE  +    D  K +    +   +  GEGAFYGP
Sbjct: 353 FTDDKILVKFSTRPEKRVGDDATWDRAEGALA---DACKQAG---LAYEIQPGEGAFYGP 406

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPS--RFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           K E+ L DA+GR+WQCGTIQVD+ LPS  R NA Y+   + K HPVM+HRAV GS+ERFI
Sbjct: 407 KLEFTLVDALGREWQCGTIQVDYQLPSAERLNAEYIGDDNAKHHPVMLHRAVLGSLERFI 466

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
           GI+IENF G  P WL   Q +V  +  +   YA+++   LK+  +  + D  N+ +N KI
Sbjct: 467 GILIENFAGAFPTWLHYQQTVVIPVAPAFNGYAEKVQAALKAAGIRSDCDLGNDRMNAKI 526

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
           R    +KIP +++ G+KEA++ ++ +R       Q +S+ D
Sbjct: 527 RLAQTQKIPYMLVVGEKEAADGTVAVRFRDGRPQQIMSVGD 567


>gi|322807448|emb|CBZ05022.1| threonyl-tRNA synthetase [Clostridium botulinum H04402 065]
          Length = 635

 Score =  589 bits (1518), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 296/642 (46%), Positives = 420/642 (65%), Gaps = 16/642 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           IK+T  DG +         SD+A  IS +L KKA+A  I+G+  DL   + ++ S+EI+T
Sbjct: 2   IKITLKDGKVMEIEEGIKISDIAMKISPALYKKALAAKIDGETVDLMTELHKDSSLEILT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            ED      +RH+ AHI+A+AV+ ++PEV++AIGP I+ GFYYDF+ +  F+ + L +IE
Sbjct: 62  FEDEMGKWALRHTGAHILAQAVKRLYPEVKLAIGPAIDTGFYYDFEADFTFTPEMLEKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            ++++II  +    +  L  E+A  L + K E YKVE++E +P  E ++ Y+QG++ DLC
Sbjct: 122 AEIKKIIKENHKLERFELPREEAINLMKEKNEDYKVELIEDLPEGEVISFYKQGDFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPHV STG+VK   KL+ +AGAYWRG+ N  ML RIYGTA+  + EL +YL  LEE++K
Sbjct: 182 AGPHVPSTGKVKSV-KLLSLAGAYWRGNENNKMLQRIYGTAFTKKSELDEYLNMLEEAKK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQ 302
           RDHRKL +E+DLF I E+G G  F+H KG  I   L ++ R +  K  Y+EI TP +L++
Sbjct: 241 RDHRKLGKELDLFSIHEEGPGFPFFHPKGMIIRNILENFWREEHTKAGYQEIRTPLILNE 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW QSGHWD Y+ NM+     D        +A+KPMNCPG + V+ + + SYR+LP+RL
Sbjct: 301 ELWHQSGHWDHYKENMYFTNIDDSD------YAIKPMNCPGGILVYKNSMHSYRDLPLRL 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           +E G V+R+E SG+LHGLMRVR FTQDDAH++ TKEQ+  E + I  LI   YK FGFE 
Sbjct: 355 SELGIVHRHELSGALHGLMRVRCFTQDDAHLYMTKEQIKEEIVGIIKLIDKFYKLFGFE- 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +GSD  W+ A N ++  LD+I    + R+N G    +GAFYGPK ++ 
Sbjct: 414 YFVELSTRPEDSMGSDEDWEIATNGLREALDSI--GKEYRVNEG----DGAFYGPKIDFH 467

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LKD IGR WQCGTIQ+DF +P RF+  Y+ +  EK  PVM+HR ++GS+ERFIGI+IE +
Sbjct: 468 LKDCIGRTWQCGTIQLDFQMPERFDLSYIGADGEKHRPVMVHRTIYGSVERFIGILIEQY 527

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P+Q  +  IT S  +Y +++   LK +++ +E D RNE I YKIRE  ++K
Sbjct: 528 AGAFPTWLAPVQVKLMNITDSQYDYLKKVEEALKENNIRVEIDTRNEKIGYKIREAQLQK 587

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P ++I GDKE     + +R         +SL + I  +  E
Sbjct: 588 VPYMLILGDKEVEAGKVAVRSRKDGDLGAISLEEFIEKIKNE 629


>gi|170754255|ref|YP_001782772.1| threonyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
 gi|229557978|sp|B1IMV3|SYT_CLOBK RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|169119467|gb|ACA43303.1| threonyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
          Length = 635

 Score =  589 bits (1518), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 296/642 (46%), Positives = 420/642 (65%), Gaps = 16/642 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           IK+T  DG +  F      SD+A  IS +L KKA+A  I+G+  DL   + ++ S+EI+T
Sbjct: 2   IKITLKDGKVMEFEEGIKISDIAMKISPALYKKALAAKIDGETMDLMTELHKDSSLEILT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            ED      +RH+ AHI+A+AV+ ++PEV++AIGP I+ GFYYDF+ +  F+ + L +IE
Sbjct: 62  FEDEMGKWALRHTGAHILAQAVKRLYPEVKLAIGPAIDTGFYYDFEADFTFTPEILEKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            ++++II  +    +  L  E+A  L +   E YKVE++E +P  E ++ Y+QG++ DLC
Sbjct: 122 AEIKKIIKENHKLERFELPREEAINLMKENNEDYKVELIEDLPEGEVISFYKQGDFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPHV STG+VK   KL+ +AGAYWRG+ N  ML RIYGTA+  + EL +YL  LEE++K
Sbjct: 182 AGPHVPSTGKVKSV-KLLSLAGAYWRGNENNKMLQRIYGTAFTKKSELDEYLNMLEEAKK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQ 302
           RDHRKL +E+DLF I E+G G  F+H KG  +   L S+ R +  K  Y+EI TP +L++
Sbjct: 241 RDHRKLGKELDLFSIHEEGPGFPFFHPKGMIVRNILESFWREEHTKAGYQEIRTPLILNE 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW QSGHWD Y+ NM+     D        +A+KPMNCPG + V+ + + SYR+LP+RL
Sbjct: 301 ALWHQSGHWDHYKENMYFTNIDDGD------YAIKPMNCPGGILVYKNSMHSYRDLPLRL 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           +E G V+R+E SG+LHGLMRVR FTQDDAH++ TKEQ+  E + I  LI   YK FGFE 
Sbjct: 355 SELGIVHRHELSGALHGLMRVRCFTQDDAHLYMTKEQIKEEVVGIIKLIDKFYKLFGFE- 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +GSD  W+ A N +K  LD+I    + R+N G    +GAFYGPK ++ 
Sbjct: 414 YFVELSTRPEDSMGSDEDWEIATNGLKEALDSI--GKEYRVNEG----DGAFYGPKIDFH 467

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LKD IGR WQCGTIQ+DF +P RF+  Y+ +  EK  PVM+HR ++GS+ERFIGI+IE +
Sbjct: 468 LKDCIGRTWQCGTIQLDFQMPERFDLSYIGADGEKHRPVMVHRTIYGSVERFIGILIEQY 527

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P+Q  +  IT +  +Y +++   LK +++ +E D RNE I YKIRE  ++K
Sbjct: 528 AGAFPTWLAPVQVKLMNITDAQYDYLKKVEETLKENNIRVEIDTRNEKIGYKIREAQLQK 587

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P ++I GDKE     + +R         +SL + I  +  E
Sbjct: 588 VPYMLILGDKEVEAGKVAVRSRKDGDLGAISLEEFIEKIKNE 629


>gi|292670652|ref|ZP_06604078.1| threonine-tRNA ligase [Selenomonas noxia ATCC 43541]
 gi|292647679|gb|EFF65651.1| threonine-tRNA ligase [Selenomonas noxia ATCC 43541]
          Length = 639

 Score =  588 bits (1517), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 291/644 (45%), Positives = 416/644 (64%), Gaps = 18/644 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +KLT PDGSI+      T  DV + +S SLAKKA+A +++GKV DL+ PV ++ + +++T
Sbjct: 2   VKLTLPDGSIRETEAGTTLLDVVKGMSNSLAKKALAASLDGKVVDLTTPVTKDAAFQVLT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPE--VQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
             D      +RH+C+HIMA+AV+ ++PE  VQ+AIGP IE+GFYYDFD E   +  +L  
Sbjct: 62  FADAGGRLALRHTCSHIMAQAVKRLYPESRVQLAIGPAIENGFYYDFDMEHQLTDADLRD 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK+M++I+  +    ++ +  ++A E F +K E YKVE++  +PA   +++Y QGE+ D
Sbjct: 122 IEKEMKKIVKENLKLERREIPRDEAIEYFRAKGENYKVELIRDLPADATISIYTQGEFID 181

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LC GPHV STG+VK   KL  VAGAYWRG     ML RIYGTA+  Q+EL  YL+ LEE+
Sbjct: 182 LCAGPHVMSTGKVKAL-KLQSVAGAYWRGSEKNKMLQRIYGTAFEKQEELDAYLHMLEEA 240

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
            KRDHRKL RE+DLF + E+G G  F+H  G  +   L+ Y R    +  Y+EI+TP +L
Sbjct: 241 AKRDHRKLGRELDLFSLHEEGPGFPFFHPNGMILRNALLEYWREVHRRYGYQEISTPVIL 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            + LW+ SGHW  YR NM+  +       D   +A+KPMNCPG + V+   L SYR+LP+
Sbjct: 301 SRKLWETSGHWFHYRENMYTTEI------DGEDYAIKPMNCPGCMLVYRSQLHSYRDLPL 354

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLAE G V+R+E SG+LHGL RVR FTQDDAH+F T +Q+  E     NL   +Y+ FG 
Sbjct: 355 RLAELGLVHRHELSGALHGLFRVRNFTQDDAHLFVTPDQIEGEIQHTINLFDEVYRTFGL 414

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
                +LSTRPE  +GSD +WD A    +G+ + ++N   D I   V  G+GAFYGPK +
Sbjct: 415 -SYKAELSTRPEDSMGSDEMWDLA---TEGLRNALENRGLDYI---VNEGDGAFYGPKID 467

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           + L+D+IGR WQCGTIQ+D +LP +F+  Y+    EK  PVM+HR V+GSIERFIGI+IE
Sbjct: 468 FHLRDSIGRTWQCGTIQLDMSLPEKFDLTYIGEDGEKHRPVMLHRVVYGSIERFIGILIE 527

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           N+ G  P+W++P+Q  +  IT     YA+ +   +    + +E D RNE   YKIRE  +
Sbjct: 528 NYAGAFPVWMAPVQVRILPITERHTAYAESLRGRMFDLGIRVEVDDRNEKTGYKIRESQV 587

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KK P  ++ GD+E    ++ +R++G   +  ++  D I ++ ++
Sbjct: 588 KKTPYTLVVGDQEQETGAVALRKYGEKDSVVMAADDFIALVQEK 631


>gi|153938058|ref|YP_001392415.1| threonyl-tRNA synthetase [Clostridium botulinum F str. Langeland]
 gi|166223335|sp|A7GI05|SYT_CLOBL RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|152933954|gb|ABS39452.1| threonine--tRNA ligase [Clostridium botulinum F str. Langeland]
 gi|295320405|gb|ADG00783.1| threonine--tRNA ligase [Clostridium botulinum F str. 230613]
          Length = 635

 Score =  588 bits (1517), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 296/642 (46%), Positives = 418/642 (65%), Gaps = 16/642 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           IK+T  DG +         SD+A  IS +L KKA+A  I+G+  DL   + ++ S+EI+T
Sbjct: 2   IKITLKDGKVMEIEEGIKISDIAMKISPALYKKALAAKIDGETVDLMTELHKDSSLEILT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            ED      +RH+ AHI+A+AV+ ++PEV++AIGP I+ GFYYDF+ +  F+ + L +IE
Sbjct: 62  FEDEMGKWALRHTGAHILAQAVKRLYPEVKLAIGPAIDTGFYYDFEADFTFTPEMLEKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            ++++II  +    +  L  E+A  L + K E YKVE++E +P  E ++ Y+QG++ DLC
Sbjct: 122 AEIKKIIKENHKLERFELPREEAINLMKEKNEDYKVELIEDLPEGEVISFYKQGDFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPHV STG+VK   KL+ +AGAYWRGD    ML RIYGTA+  + EL +YL  +EE++K
Sbjct: 182 AGPHVPSTGKVKSV-KLLSLAGAYWRGDEKNKMLQRIYGTAFTKKSELDEYLNMIEEAKK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQ 302
           RDHRKL +E+DLF I E+G G  F+H KG  +   L S+ R K  K  Y+EI TP +L++
Sbjct: 241 RDHRKLGKELDLFSIHEEGPGFPFFHPKGMIVRNILESFWREKHTKAGYQEIRTPLILNE 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW QSGHWD Y+ NM+     D        +A+KPMNCPG + V+   + SYR+LP+RL
Sbjct: 301 ALWHQSGHWDHYKENMYFTNIDDGD------YAIKPMNCPGGILVYKSSMHSYRDLPLRL 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           +E G V+R+E SG+LHGLMRVR FTQDDAH++ TKEQ+  E + I  LI   YK FGFE 
Sbjct: 355 SELGIVHRHELSGALHGLMRVRCFTQDDAHLYMTKEQIKEEVIGIIKLIDEFYKLFGFE- 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +GSD  W+ A N ++  LD+I    + R+N G    +GAFYGPK ++ 
Sbjct: 414 YFVELSTRPEDSMGSDEDWEIATNGLREALDSI--GKEYRVNEG----DGAFYGPKIDFH 467

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LKD IGR WQCGTIQ+DF +P RF+  Y+ +  EK  PVM+HR ++GS+ERFIGI+IE +
Sbjct: 468 LKDCIGRTWQCGTIQLDFQMPERFDLSYIGADGEKHRPVMVHRTIYGSVERFIGILIEQY 527

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P+Q  +  IT S  +Y +++   LK +++ +E D RNE I YKIRE  ++K
Sbjct: 528 AGAFPTWLAPVQVKLMNITDSQYDYLKKVEETLKENNIRVEIDTRNEKIGYKIREAQLQK 587

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P ++I GDKE     + +R         +SL + I  +  E
Sbjct: 588 VPYMLILGDKEVEAGKVAVRSRKDGDLGAISLEEFIEKIKNE 629


>gi|307634865|gb|ADI84351.2| threonyl-tRNA synthetase [Geobacter sulfurreducens KN400]
          Length = 645

 Score =  587 bits (1514), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 293/630 (46%), Positives = 423/630 (67%), Gaps = 21/630 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEI 61
            DI++T PDGS +     AT  D+A SI   LAK A+A  I+G   D++ P+ +G+ +EI
Sbjct: 11  GDIRVTLPDGSERILAEGATVRDLAASIGAGLAKAAIAGKIDGVQVDVTAPLTDGARVEI 70

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           IT +    L +IRHS +H+MA+AV+ ++P  +V IGP +E GFYYDFD E PFS ++LA+
Sbjct: 71  ITDKSADGLDIIRHSTSHLMAQAVKQLFPTAKVTIGPAVETGFYYDFDVETPFSPEDLAR 130

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE++M+E+   D P  +Q LS ++A +LF    E YKVEI+E++P +E+V+LYRQG++ D
Sbjct: 131 IEERMRELAKADIPVERQVLSRDEAVKLFRDMGEEYKVEIIEALP-EESVSLYRQGDFVD 189

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ ST   + F KL  +AGAYWRGD    ML R+YGTA+  ++EL  YL  +EE+
Sbjct: 190 LCRGPHLPSTSFCRAF-KLTSLAGAYWRGDEKNKMLQRVYGTAFADKKELDAYLEKIEEA 248

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQV 299
           ++RDHRKL RE+DLF  ++D G+G + WH KG  +   L  + RR+ +K  Y+ +  PQ+
Sbjct: 249 KRRDHRKLGRELDLFSFSDDVGAGFVIWHPKGAMLRTLLEDFERREHLKRGYDIVVGPQI 308

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           L   LWQ+SGH+D+YR NM+  +       + + F +KPMNC  H+ ++   L+SYR+LP
Sbjct: 309 LKTELWQRSGHYDNYRENMYFTEV------EGQGFGIKPMNCLSHMMIYKSQLRSYRDLP 362

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R  E G+V+R+E +G LHGL+RVR FTQDDAH+ CT EQ+  E   + + +  +   FG
Sbjct: 363 LRFFELGTVHRHERAGVLHGLLRVRCFTQDDAHILCTPEQLDAEIKGVISFVNDVMGIFG 422

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD-RINTGVLLGEGAFYGPK 478
           F+  M +LSTRPEK +GSD  W+ A   + G L   K+S +   IN G    +GAFYGPK
Sbjct: 423 FDYEM-ELSTRPEKSIGSDEDWERATGALLGAL---KDSGRPYEINEG----DGAFYGPK 474

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +  L+D++ R WQC TIQ DF LP RF+  YV++  E+  PVM+HR + GSIERFIG++
Sbjct: 475 IDIKLRDSLDRKWQCATIQCDFTLPERFDLTYVDADGERKRPVMVHRVILGSIERFIGVL 534

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+F GN PLWLSP+QAIV T+T +   YA ++   L+++ + ++ DFRNE + +KIRE 
Sbjct: 535 IEHFAGNFPLWLSPVQAIVLTVTDNQQPYAAQVFETLRTNGVRVQKDFRNEKLGFKIREA 594

Query: 599 SIKKIPIIIICGDKEASERSIGIR-RFGST 627
            ++KIP +++ GDKE    ++  R R GS 
Sbjct: 595 QLQKIPYMLVIGDKEVESGTVTPRFRDGSN 624


>gi|148264672|ref|YP_001231378.1| threonyl-tRNA synthetase [Geobacter uraniireducens Rf4]
 gi|146398172|gb|ABQ26805.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Geobacter
           uraniireducens Rf4]
          Length = 645

 Score =  587 bits (1514), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 289/616 (46%), Positives = 415/616 (67%), Gaps = 22/616 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEI 61
           SD K+T PDG+ +     AT  D+A SI   LAK A+A  ING + DL+  + +G+ +EI
Sbjct: 11  SDTKVTLPDGTERTLQEGATVYDLAASIGAGLAKAAIAGKINGDLVDLATVLPDGAKVEI 70

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           IT +   +L +IRHS +H+MA+AV+S++PE +V IGP IE GFYYDFD + PF+ ++L +
Sbjct: 71  ITEKSAEALEIIRHSTSHLMAQAVKSLFPEAKVTIGPAIETGFYYDFDVDHPFTPEDLEK 130

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEKKM E+   +    +Q L+   A +LF    E YKVE++E + A + V+LYRQG++ D
Sbjct: 131 IEKKMSELAKANLKIERQVLTGADAIKLFRDMGEIYKVELIEDLSA-DTVSLYRQGDFVD 189

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ ST  +K F KL  +AGAYWRGD  R ML R+YGTA+  ++EL  YL  LEE+
Sbjct: 190 LCRGPHLPSTSHIKAF-KLTSIAGAYWRGDEKRKMLQRVYGTAFADKKELDAYLARLEEA 248

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK--IKDDYEEINTPQ 298
           ++RDHRKL +E+DLF  +++ G+G++ WH KG  + +T++    RK   +  Y+ +  PQ
Sbjct: 249 KRRDHRKLGKELDLFSFSDEVGAGLVIWHPKG-AMLRTILEDFERKEHFRRGYDIVVGPQ 307

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L   LWQ+SGH+D+YR NM+  +       D + + +KPMNC  H+ ++   L+SYR+L
Sbjct: 308 ILKTELWQRSGHYDNYRENMYFTEV------DEQGYGIKPMNCLAHMMIYKSQLRSYRDL 361

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R  E G+V+R+E +G LHGL+RVRGFTQDDAH+ CT EQ+  E   + + +  +   F
Sbjct: 362 PLRYFELGTVHRHERAGVLHGLLRVRGFTQDDAHILCTPEQLDGEIKGVLSFVKDVMGIF 421

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD-RINTGVLLGEGAFYGP 477
           GFE  M +LSTRPEK +GSD  W   E   K +L  +++S +   IN G    +GAFYGP
Sbjct: 422 GFEYEM-ELSTRPEKSIGSDEDW---ERATKALLGALQDSGRPFEINEG----DGAFYGP 473

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  L+DA+ R WQC TIQ DF LP RF+  Y+ +  EK  PVM+HR + G+IERFIG+
Sbjct: 474 KIDIKLRDALDRRWQCATIQCDFTLPERFDLTYIGADGEKKRPVMVHRVILGAIERFIGV 533

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE+F G+ P+WL+P+QAIV T+T + V YA EI   L++  + ++ DFRNE + +KIRE
Sbjct: 534 LIEHFAGSFPVWLAPVQAIVLTVTDNQVSYANEIYTALRAAGIRVQQDFRNEKLGFKIRE 593

Query: 598 HSIKKIPIIIICGDKE 613
             ++KIP ++I GDKE
Sbjct: 594 AQLQKIPYMLIIGDKE 609


>gi|229167201|ref|ZP_04294942.1| Threonyl-tRNA synthetase [Bacillus cereus AH621]
 gi|228616239|gb|EEK73323.1| Threonyl-tRNA synthetase [Bacillus cereus AH621]
          Length = 639

 Score =  587 bits (1514), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 287/645 (44%), Positives = 442/645 (68%), Gaps = 18/645 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           I++ FPDGS+K F    T  ++A +IS SL KKAVA  +N +  DL   + E + +EIIT
Sbjct: 6   IEIKFPDGSVKEFVKGITLEEIAGAISSSLKKKAVAGKVNDQSFDLRRNIEESAKVEIIT 65

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +    + + RHS AHI+A+AV+ I+ +V + +GP+IE+GFYYD D +   + ++L +IE
Sbjct: 66  MDSDEGVKIARHSAAHILAQAVKRIYGDVNLGVGPVIENGFYYDMDLQSSVNVEDLPKIE 125

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M+ II  +    +  +S E+A+ELF+   ++ K+E+LE+IP  E+VTLY+QGE+ DLC
Sbjct: 126 KEMKNIINENVKIERVEVSREEAKELFQEMNDSLKLELLEAIPNGESVTLYKQGEFVDLC 185

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG +K  F+L  V+GAYWRGDSN  +L RIYG A+++QQ+L +YL+F+EE+ K
Sbjct: 186 RGPHLPSTGYLKA-FQLSHVSGAYWRGDSNNQVLQRIYGVAFSSQQKLEEYLHFVEEAAK 244

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           R+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R    + +Y+E+ TP +++Q
Sbjct: 245 RNHRKLGSELELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQNEYNYQEVRTPFMMNQ 304

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R+
Sbjct: 305 ELWEKSGHWGHYKDNMYFSEV------DHKSFALKPMNCPGHMLMFKNKLHSYRELPIRM 358

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG V+R+E SG+L+GL+RVR F QDDAH+F T EQ+ +E   +   I  +YK FGFE 
Sbjct: 359 CEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPEQIEDEIKSVLAQIDYVYKTFGFE- 417

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +G D LW+ AE  ++ VL ++  + + R+N     G+GAFYGPK ++ 
Sbjct: 418 YEVELSTRPEDSMGDDKLWEQAELALENVLQSL--NYKYRLNE----GDGAFYGPKIDFH 471

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+ R  QCGT+Q+DF +P +F+  Y++ ++EK  PV+IHRAV GS++RF+ I+IE+F
Sbjct: 472 IKDALNRSHQCGTVQLDFQMPEKFDLNYIDENNEKRRPVVIHRAVLGSLDRFLAILIEHF 531

Query: 543 KGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            G  PLW++P+Q  V  ++++  V+YA E+A+ L    + +E D R+E + YKIRE  ++
Sbjct: 532 GGAFPLWVAPVQVKVIPVSNAVHVQYANEVADKLAQAGIRVERDIRDEKLGYKIREAQMQ 591

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           K+P +++ GDKE    ++ +R++G   ++ +  LDA     KE +
Sbjct: 592 KVPYVLVIGDKEMESEAVNVRKYGEEKSEVIE-LDAFVESMKEEI 635


>gi|167629857|ref|YP_001680356.1| threonyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
 gi|167592597|gb|ABZ84345.1| threonyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
          Length = 641

 Score =  587 bits (1514), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 290/649 (44%), Positives = 425/649 (65%), Gaps = 19/649 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M + +K+T  DG+++ FP   T + VAE++SR LA+ AVA  ++GK+  L+ P+ ++  +
Sbjct: 1   MSNIVKVTLKDGAVREFPQGTTVAAVAEALSRKLAQHAVAGKLDGKMVGLTTPIEKDAEL 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EI+T +DP    V RHS +H++A+AVQ  +P  ++ IGP IE+GFYYDFD E  F+ ++L
Sbjct: 61  EILTFDDPEGREVYRHSSSHLLAQAVQRRFPGTKLGIGPAIENGFYYDFDAEHKFTPEDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEK+M  I+  D P  +Q +S E+A   FE + E YKVE+++ +P    +++Y QG++
Sbjct: 121 EAIEKEMAHIVKADYPITRQEVSREEAIRFFEERGEMYKVELVKDLPEDAVISMYSQGDF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLC GPH+ STGQ+K F KLM +AGAYWRG     ML RIYGT++  + EL ++L  +E
Sbjct: 181 VDLCAGPHLPSTGQIKAF-KLMNLAGAYWRGSEKNKMLQRIYGTSFPKKAELDEHLRRIE 239

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQ 298
           E+++RDHR++ +E++L+ I E+G G  F+  KG  I   L ++ R +  +  Y E+ TP 
Sbjct: 240 EAKRRDHRRIGQELELYTILEEGPGFPFFFPKGMIIRNELENFWREEHARAGYREVRTPI 299

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L++ LW++SGHW +YR NM+  +       D   + +KPMNCPG + V+   + SYR+L
Sbjct: 300 ILNRSLWERSGHWANYRENMYVTQI------DEEDYCVKPMNCPGGMLVYKQAIHSYRDL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+ E G V+R+E SG+LHGLMRVR FTQDDAH+F T  Q+ +E + +  LI  +YK F
Sbjct: 354 PLRMGELGLVHRHEISGALHGLMRVRCFTQDDAHIFMTPGQIKDEIIGVIELIDRMYKTF 413

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD-RINTGVLLGEGAFYGP 477
           GF    V+LST+PEK +GSD +W+ A N ++   + +K    D +IN G    +GAFYGP
Sbjct: 414 GF-AYHVELSTKPEKAMGSDEIWELATNSLE---EALKAKGMDYKINPG----DGAFYGP 465

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K ++ LKD IGR WQCGTIQ+DF +P RF+  YV    +K  PVMIHR VFGSIERFIGI
Sbjct: 466 KIDFHLKDCIGRTWQCGTIQLDFQMPERFDLTYVGEDGQKHRPVMIHRVVFGSIERFIGI 525

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E++ G  P WL+P+QA V  IT    EYA  + + L    + +E D RNE I YKIRE
Sbjct: 526 LTEHYAGAFPTWLAPVQARVLPITDRHHEYAASVRSALAKQGVRVEVDGRNEKIGYKIRE 585

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
             ++KIP +++ GDKEA   ++ +R+ G      ++ LDA   +  E +
Sbjct: 586 GQVQKIPYLLVVGDKEAENGAVAVRKRGEGDKGAMA-LDAFAAMILEEI 633


>gi|226950568|ref|YP_002805659.1| threonine--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
 gi|254783516|sp|C1FKN0|SYT_CLOBJ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|226841746|gb|ACO84412.1| threonine--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
          Length = 635

 Score =  587 bits (1514), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 294/642 (45%), Positives = 421/642 (65%), Gaps = 16/642 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           IK+T  DG +  F      SD+A  IS +L KKA+A  I+G+  DL   + ++ S+EI+T
Sbjct: 2   IKITLKDGKVMEFEEGIKISDIAMKISPALYKKALAAKIDGETVDLMTELHKDSSLEILT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            ED      +RH+ +H++A+AV+ ++PEV++AIGP I+ GFYYDF+ +  F+ + L +IE
Sbjct: 62  FEDEMGKWTLRHTGSHMLAQAVKRLYPEVKLAIGPAIDTGFYYDFEADFTFTPEMLEKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            ++++II  +    +  L  E+A +L + K E YKVE++E +P  E ++ Y+QG++ DLC
Sbjct: 122 AEIKKIIKENHKLERFELPREEAIKLMKEKNEDYKVELIEDLPEGEVISFYKQGDFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPHV STG+VK   KL+ +AGAYWRGD    ML RIYGTA+  + EL +YL  +EE++K
Sbjct: 182 AGPHVPSTGKVKSV-KLLSLAGAYWRGDEKNKMLQRIYGTAFTKKSELDEYLNMIEEAKK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQ 302
           RDHRKL +E+DLF I E+G G  F+H KG  +   L S+ R +  K  Y+EI TP +L++
Sbjct: 241 RDHRKLGKELDLFSIHEEGPGFPFFHPKGMIVRNILESFWREEHTKAGYQEIRTPLILNE 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW QSGHWD Y+ NM+     D        +A+KPMNCPG + V+ + + SYR+LP+RL
Sbjct: 301 ALWHQSGHWDHYKENMYFTNIDDGD------YAIKPMNCPGGILVYKNSMHSYRDLPLRL 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           +E G V+R+E SG+LHGLMRVR FTQDDAH++ TKEQ+  E + I  LI   YK FGFE 
Sbjct: 355 SELGIVHRHELSGALHGLMRVRCFTQDDAHLYMTKEQIKEEIVGIIKLIDKFYKLFGFE- 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +GSD  W+ A N ++  LD+I    + R+N G    +GAFYGPK ++ 
Sbjct: 414 YFVELSTRPEDSMGSDEDWEIATNGLREALDSI--GKEYRVNEG----DGAFYGPKIDFH 467

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LKD IGR WQCGTIQ+DF +P RF+  Y+ +  EK  PVM+HR ++GS+ERFIGI+IE +
Sbjct: 468 LKDCIGRTWQCGTIQLDFQMPERFDLSYIGADGEKHRPVMVHRTIYGSVERFIGILIEQY 527

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P+Q  +  IT S  +Y +++   LK +++ +E D RNE I YKIRE  ++K
Sbjct: 528 AGAFPTWLAPVQVKLMNITDSQYDYLKKVEEALKENNIRVEIDTRNEKIGYKIREAQLQK 587

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P ++I GDKE     + +R         +SL + I  +  E
Sbjct: 588 VPYMLILGDKEVEAGKVAVRSRKDGDLGAISLEEFIEKIKNE 629


>gi|39996615|ref|NP_952566.1| threonyl-tRNA synthetase [Geobacter sulfurreducens PCA]
 gi|73919793|sp|Q74D04|SYT_GEOSL RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|39983496|gb|AAR34889.1| threonyl-tRNA synthetase [Geobacter sulfurreducens PCA]
          Length = 636

 Score =  587 bits (1514), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 293/630 (46%), Positives = 423/630 (67%), Gaps = 21/630 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEI 61
            DI++T PDGS +     AT  D+A SI   LAK A+A  I+G   D++ P+ +G+ +EI
Sbjct: 2   GDIRVTLPDGSERILAEGATVRDLAASIGAGLAKAAIAGKIDGVQVDVTAPLTDGARVEI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           IT +    L +IRHS +H+MA+AV+ ++P  +V IGP +E GFYYDFD E PFS ++LA+
Sbjct: 62  ITDKSADGLDIIRHSTSHLMAQAVKQLFPTAKVTIGPAVETGFYYDFDVETPFSPEDLAR 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE++M+E+   D P  +Q LS ++A +LF    E YKVEI+E++P +E+V+LYRQG++ D
Sbjct: 122 IEERMRELAKADIPVERQVLSRDEAVKLFRDMGEEYKVEIIEALP-EESVSLYRQGDFVD 180

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ ST   + F KL  +AGAYWRGD    ML R+YGTA+  ++EL  YL  +EE+
Sbjct: 181 LCRGPHLPSTSFCRAF-KLTSLAGAYWRGDEKNKMLQRVYGTAFADKKELDAYLEKIEEA 239

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQV 299
           ++RDHRKL RE+DLF  ++D G+G + WH KG  +   L  + RR+ +K  Y+ +  PQ+
Sbjct: 240 KRRDHRKLGRELDLFSFSDDVGAGFVIWHPKGAMLRTLLEDFERREHLKRGYDIVVGPQI 299

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           L   LWQ+SGH+D+YR NM+  +       + + F +KPMNC  H+ ++   L+SYR+LP
Sbjct: 300 LKTELWQRSGHYDNYRENMYFTEV------EGQGFGIKPMNCLSHMMIYKSQLRSYRDLP 353

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R  E G+V+R+E +G LHGL+RVR FTQDDAH+ CT EQ+  E   + + +  +   FG
Sbjct: 354 LRFFELGTVHRHERAGVLHGLLRVRCFTQDDAHILCTPEQLDAEIKGVISFVNDVMGIFG 413

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD-RINTGVLLGEGAFYGPK 478
           F+  M +LSTRPEK +GSD  W+ A   + G L   K+S +   IN G    +GAFYGPK
Sbjct: 414 FDYEM-ELSTRPEKSIGSDEDWERATGALLGAL---KDSGRPYEINEG----DGAFYGPK 465

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +  L+D++ R WQC TIQ DF LP RF+  YV++  E+  PVM+HR + GSIERFIG++
Sbjct: 466 IDIKLRDSLDRKWQCATIQCDFTLPERFDLTYVDADGERKRPVMVHRVILGSIERFIGVL 525

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+F GN PLWLSP+QAIV T+T +   YA ++   L+++ + ++ DFRNE + +KIRE 
Sbjct: 526 IEHFAGNFPLWLSPVQAIVLTVTDNQQPYAAQVFETLRTNGVRVQKDFRNEKLGFKIREA 585

Query: 599 SIKKIPIIIICGDKEASERSIGIR-RFGST 627
            ++KIP +++ GDKE    ++  R R GS 
Sbjct: 586 QLQKIPYMLVIGDKEVESGTVTPRFRDGSN 615


>gi|197118372|ref|YP_002138799.1| threonyl-tRNA synthetase [Geobacter bemidjiensis Bem]
 gi|238690868|sp|B5EBX9|SYT_GEOBB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|197087732|gb|ACH39003.1| threonyl-tRNA synthetase [Geobacter bemidjiensis Bem]
          Length = 636

 Score =  587 bits (1513), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 286/625 (45%), Positives = 421/625 (67%), Gaps = 22/625 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEI 61
           ++I +T PDGS +  P  A+  D+A SI   LAK A+A  I+G + DL+ P+ +G+ +EI
Sbjct: 2   NEINVTLPDGSQRPLPAGASIFDLAASIGAGLAKAAIAGKIDGNLVDLNTPLADGARVEI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           IT + P +L +IRHS +H+MA+AV++++P+ +V IGP IE GFYYDFD + PF+ ++L +
Sbjct: 62  ITEKSPEALEIIRHSTSHLMAQAVKALFPQAKVTIGPAIETGFYYDFDVDHPFTPEDLEK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE+KM+E+   D    ++ L+   A  LF+   E YKVE++E + A + V+LY QG++ D
Sbjct: 122 IEEKMRELAKADLKIERKELTSADAIALFKGMGENYKVELIEDLGA-DKVSLYSQGDFVD 180

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+  T  +K F KL  +AGAYWRGD  RPML R+YGTA+  ++EL  YL  +EE+
Sbjct: 181 LCRGPHLPKTSFIKAF-KLTSIAGAYWRGDEKRPMLQRVYGTAFGDKKELEAYLARIEEA 239

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK--IKDDYEEINTPQ 298
           +KRDHRKL RE+DLF   ++ G+G++ WH KG  + +T++    RK  +K  Y+ +  PQ
Sbjct: 240 KKRDHRKLGRELDLFSFNDEVGAGLVIWHPKG-AMLRTILEDFERKEHLKRGYDIVLGPQ 298

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L   LWQ+SGH+++YR NM+       T  D +++ +KPMNC  H+ ++   L+SYR+L
Sbjct: 299 ILKTELWQRSGHYENYRENMYF------TTVDEQSYGVKPMNCLAHMMIYRSQLRSYRDL 352

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R  E G+V+R+E +G LHGL+RVRGFTQDDAH+ CT EQ+  E   +   +  +   F
Sbjct: 353 PLRYFELGTVHRHERAGVLHGLLRVRGFTQDDAHILCTPEQLDAEIKGVIQFVTEVMGIF 412

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD-RINTGVLLGEGAFYGP 477
           GFE  M +LSTRPEK +GSD  W+ A N    +L+ +K+S +   IN G    +GAFYGP
Sbjct: 413 GFEFEM-ELSTRPEKSIGSDDAWELATN---ALLNALKDSGRPYEINEG----DGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  L+DA+ R WQC TIQ DF LP RF+  YV++  EK  PVM+HR + G+IERFIG+
Sbjct: 465 KIDIKLRDALDRRWQCATIQCDFTLPERFDLTYVDADGEKKRPVMVHRVILGAIERFIGV 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE+F GN P WL+P+QA + T+T + + YAQ   + L++  + ++ DFRNE + +KIRE
Sbjct: 525 LIEHFAGNFPTWLAPVQATIVTVTDNQIPYAQAAFDKLRAAGIRVQKDFRNEKLGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIR 622
             ++KIP +++ GDKE     +  R
Sbjct: 585 AQLQKIPYMLVVGDKEVESGMLAPR 609


>gi|332798664|ref|YP_004460163.1| threonyl-tRNA synthetase [Tepidanaerobacter sp. Re1]
 gi|332696399|gb|AEE90856.1| threonyl-tRNA synthetase [Tepidanaerobacter sp. Re1]
          Length = 636

 Score =  587 bits (1513), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 293/643 (45%), Positives = 431/643 (67%), Gaps = 19/643 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K++  DG  K +    T  ++AE+ISR L K+A+A  ++G + DLS  V ++ +++ +T
Sbjct: 4   VKVSLKDGVEKVYQKGITLLEIAENISRKLGKEALAAKVDGAIKDLSSKVDKDCNVKFLT 63

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            ED     V  HS +H+MA+AV+ ++PE ++AIGP I++GFYYDFD+++ F+  +L +IE
Sbjct: 64  FEDEEGRKVFWHSSSHVMAQAVKRLFPETKLAIGPAIDEGFYYDFDRDESFTPSDLEKIE 123

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           ++M +IIA D  F ++ +S E+A E      E YKVE++E++P    ++ Y+QGE+ DLC
Sbjct: 124 QEMAKIIAEDYAFCRKNVSKEEAIEELNKINEPYKVELVEALPEGAPISFYQQGEFKDLC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+ STG++K F KL  +AGAYWRGD +  ML RIYG ++  +  L +YL  +EE+++
Sbjct: 184 AGPHIPSTGRIKAF-KLTSLAGAYWRGDEHNKMLQRIYGISFPKKSMLDEYLTRIEEAKR 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQ 302
           RDHRKL +E+DLF I E+G G  F+H KG  I+  L  + R++  K  Y+EI TP +L++
Sbjct: 243 RDHRKLGKELDLFSIHEEGPGFPFFHPKGMIIWNLLTDFWRKEHSKRGYQEIKTPIILNE 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y+ NM+  K  D        +A+KPMNCPG + ++    +SYR+LP+RL
Sbjct: 303 ELWRRSGHWDHYKENMYFTKIDD------MNYAVKPMNCPGGILMYKTDSRSYRDLPIRL 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            E G V+R+E SG LHGLMRVR FTQDDAH+F    Q+ +E + + +L+   Y+ FGFE 
Sbjct: 357 GELGLVHRHELSGVLHGLMRVRCFTQDDAHIFMMPSQIEDEIIGVIDLVDYFYQIFGFE- 415

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +GSD LWD A   ++G LD  K     +IN G    +GAFYGPK ++ 
Sbjct: 416 YNVELSTRPENSMGSDELWDQATAALQGALD--KKGMSYKINEG----DGAFYGPKIDFH 469

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LKD++GR WQCGTIQ+DF +P RF+  Y+ +  EK  PVMIHR +FGSIERFIGI+IE++
Sbjct: 470 LKDSLGRTWQCGTIQLDFQMPERFDLSYIGADGEKHRPVMIHRVIFGSIERFIGILIEHY 529

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P+WL+P+QA V  I+   ++YA ++   L+   + +E D RNE I YK+R+  +KK
Sbjct: 530 AGAFPVWLAPVQARVLPISEKHMDYAYKVKKQLEEAGIRVEVDERNEKIGYKVRDAQMKK 589

Query: 603 IPIIIICGDKEASERSIGIR-RFGSTTTQKV--SLLDAIPILT 642
           IP ++I GDKEA+E ++ +R R      QK   + +D + ILT
Sbjct: 590 IPYMLIVGDKEANENTVSVRTREKGDVGQKPIETFIDEVLILT 632


>gi|147678291|ref|YP_001212506.1| threonyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
 gi|146274388|dbj|BAF60137.1| threonyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
          Length = 640

 Score =  587 bits (1513), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 289/624 (46%), Positives = 410/624 (65%), Gaps = 16/624 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M   I +TFPDGS + +P      +VA+SIS  LA++A+A  ++G++ DL+ P+ ++ S+
Sbjct: 3   MAEKISVTFPDGSSREYPAGTPLMEVAQSISSRLAREALAARVDGRLMDLNRPLEKDASV 62

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           + +T E      V RHS AH+MA+AVQ ++P  ++AIGP I DGFYYDFD ++PF+ ++L
Sbjct: 63  QFLTFEHEEGRQVYRHSTAHVMAQAVQRLFPGTRLAIGPAIADGFYYDFDPQEPFTPEDL 122

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A+IEK+M+ II  D PF +  LS  +A  +F    + YKVE++E +P +  +++YRQGE+
Sbjct: 123 AKIEKEMENIIKADLPFERAELSRAEALAMFREAGQDYKVELIEDLPPEVPISVYRQGEF 182

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLC GPHV STG++K   KLM VAGAYWRG     ML RIYGT++  +  L +YL+ LE
Sbjct: 183 VDLCTGPHVPSTGRLKAV-KLMSVAGAYWRGSEKNKMLQRIYGTSFPKKAMLDEYLFRLE 241

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQ 298
           E+++RDHRKL  E+DLF I ++G G  F+H KG  +   L  + R +  K  Y+EI TP 
Sbjct: 242 EAKRRDHRKLGAELDLFSIHDEGPGFPFFHPKGMILRNELEKFWREEHQKRGYQEIRTPV 301

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L ++LW++SGHW+ YR NM+  +  D        +A+KPMNCPG + ++ + L SYREL
Sbjct: 302 ILSRNLWERSGHWEHYRENMYFTRIDDGD------YAVKPMNCPGSILIYKNRLHSYREL 355

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAE G V+R+E SG LHGLMRVR FTQDDAH+F    Q+  E + +  L+   Y+ F
Sbjct: 356 PIRLAELGLVHRHELSGVLHGLMRVRCFTQDDAHIFMLPSQVKEEIIGVIELVDDFYRVF 415

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF    V+LSTRPEK +GSD  W+ A   ++  L+        R+N G    +GAFYGPK
Sbjct: 416 GF-PYHVELSTRPEKAMGSDETWEMATGALRDALEA--RGLDYRVNEG----DGAFYGPK 468

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++ L+D++GR WQCGTIQ+DF +P +F+  Y+    +K  PVMIHR VFGSIERFIGI+
Sbjct: 469 IDFHLQDSLGRTWQCGTIQLDFLMPEKFDLTYIGEDGQKHRPVMIHRVVFGSIERFIGIL 528

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
            E+F G  P WL+P+Q  V  I      YA+++ + L    +  E D RNE I YKIRE 
Sbjct: 529 TEHFAGAFPAWLAPVQVRVLPIADRHAGYARKVLDCLTGAGIRAELDARNEKIGYKIREA 588

Query: 599 SIKKIPIIIICGDKEASERSIGIR 622
             +KIP +++ GDKEA   ++ +R
Sbjct: 589 QAQKIPYMLVTGDKEAENGTVAVR 612


>gi|237736526|ref|ZP_04567007.1| threonyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
 gi|229421568|gb|EEO36615.1| threonyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
          Length = 638

 Score =  587 bits (1512), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 307/646 (47%), Positives = 420/646 (65%), Gaps = 19/646 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV--REGSIEII 62
           +K+  P G +K F        VA+SIS SLAKK+VA  +N ++ D+S  +   E  IE I
Sbjct: 1   MKVILPSGDVKEFEGEVNLFTVAKSISNSLAKKSVAAKVNDELVDMSTVLNGEEFRIEFI 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TPE      +IRHS AH+MA+AV  ++P  +VAIGP IE+GFYYDFD ++ F+ ++LA+I
Sbjct: 61  TPETEEGEEIIRHSTAHLMAQAVVRLFPGTKVAIGPAIENGFYYDFDPKEQFTEEDLAKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M++I+  +    +  ++ E A + FE   E YKVEI++ I   E ++ Y+QGE+ DL
Sbjct: 121 EAEMKKIVKENEKIERVMMTREDAIKHFEELGEEYKVEIIKEIAQGEMLSFYKQGEFMDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV ST  +K F KL  VAGAYWRG+S+  ML RIYG A+  +++L  YL  LEE+E
Sbjct: 181 CRGPHVPSTSYLKAF-KLKSVAGAYWRGNSDNKMLQRIYGFAFADEKKLKDYLTLLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLD 301
           KRDHRKL +E+DLF ++E G G   +  KG  I  TLI+  +R+     Y EI TP +L+
Sbjct: 240 KRDHRKLGKELDLFFVSEYGPGFPIFLPKGMAIRNTLINLWKREHTLAGYTEIMTPIMLN 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW +YR NM+     D+T      FA+KPMNCPG +  + + L SY++LP+R
Sbjct: 300 KELWETSGHWYNYRENMY-TSTIDET-----EFAIKPMNCPGGIIAYKYQLHSYKDLPIR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY-KDFGF 420
             E G+V+R+E SG+LHGLMRVR FTQDDAH+F T EQ+  E + + NLI   Y K FGF
Sbjct: 354 CGELGTVHRHEFSGALHGLMRVRCFTQDDAHIFMTPEQIEEEIIGVVNLIDKFYSKLFGF 413

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           E   ++LST+PEK +GSD +W+ AE+ + G L+ I  S   ++N G    +GAFYGPK +
Sbjct: 414 E-YHIELSTKPEKAIGSDEIWEKAESALAGALEKIGKSY--KLNPG----DGAFYGPKLD 466

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           + +KDAIGR WQCGTIQ+DFNLP RF+  Y+    EK  PVMIHR V+GSIERFIGI+IE
Sbjct: 467 FKIKDAIGRTWQCGTIQLDFNLPERFDISYIGEDGEKHRPVMIHRVVYGSIERFIGILIE 526

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           ++ G  PLWL+P Q  V TI      YA+EI   L    +  E D R E+I YKIRE + 
Sbjct: 527 HYAGAFPLWLAPTQVKVLTINDETKPYAEEICRTLLERGIRAELDDRAESIGYKIREANG 586

Query: 601 K-KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           K K+P+ +I G  E   R + IRR GS     + L + + ++  E+
Sbjct: 587 KYKVPVQLIIGKNEVENREVNIRRRGSQEQTSMKLDEFLDMIVDEA 632


>gi|323702723|ref|ZP_08114384.1| threonyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
 gi|323532386|gb|EGB22264.1| threonyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
          Length = 636

 Score =  586 bits (1511), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 291/642 (45%), Positives = 423/642 (65%), Gaps = 16/642 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           +K+T  DGS++ +P   T  +VA+SIS+ LA++A+   +NG+  DLS P++E  ++E++T
Sbjct: 2   VKVTLKDGSVREYPAGTTVLEVAKSISQGLAREALVGKVNGRTVDLSYPIKEDATLELLT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
             D     V RHS AH++A+AV+ ++P+ ++AIGP I+DGFYYDFD ++PF+  EL QIE
Sbjct: 62  FNDEEGRHVYRHSTAHVLAQAVKRLFPDTKLAIGPAIQDGFYYDFDVDRPFTPAELEQIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M +II  D PF +  +S E+A E F    E YKVE++  +P    ++ Y+QG++ DLC
Sbjct: 122 AEMNKIIKEDLPFERVEISREEALERFGKAGEIYKVELINDLPEDAVISCYKQGDFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPHV STG++K   KLM +AGAYWRG     ML RIYGT++  +  L ++L+ +EE+++
Sbjct: 182 AGPHVPSTGRLKSI-KLMNIAGAYWRGSEKNKMLQRIYGTSFPKKALLDEHLFRIEEAKR 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +E+DLF I ++G G  F+H KG  +   L ++ RR+ K   Y+EI TP +L++
Sbjct: 241 RDHRKLGQELDLFSIQDEGPGFPFFHPKGMVLRNELENFWRREHKKRGYQEIRTPIILNR 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+QSGHW  Y+ NM+  K  D        +A+KPMNCPG + V+   + SYR+LP+RL
Sbjct: 301 SLWEQSGHWAHYKENMYFTKIDD------ADYAVKPMNCPGSILVYKTRMHSYRDLPLRL 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AE G V+R+E SG+LHGLMRVR FTQDDAH+F    Q+ +E + + +L    YK FG   
Sbjct: 355 AELGLVHRHELSGALHGLMRVRCFTQDDAHIFMLPSQIKDEIIGVIDLFEYFYKTFGL-S 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPEK +GSD +W+ A   ++  L+  KN    ++N G    +GAFYGPK ++ 
Sbjct: 414 YHVELSTRPEKSMGSDEIWELATRSLQDALEA-KNMPY-KVNEG----DGAFYGPKIDFH 467

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D++GR WQCGTIQ+DF +P +F+  YV    +K  PVMIHR VFGSIERFIGI+ E+F
Sbjct: 468 LTDSLGRTWQCGTIQLDFQMPEKFDLTYVGEDGQKHRPVMIHRVVFGSIERFIGILTEHF 527

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P+WL+P+Q  V  IT    +YA+E+   L +  + +E D RNE INYKIRE   +K
Sbjct: 528 AGAFPVWLAPVQVKVLPITDKHHDYARELVQKLDAMDIRVELDARNEKINYKIREAQTQK 587

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IP +++ GD+E    ++ +R+ G      V + + I  +  E
Sbjct: 588 IPYMLVIGDREMENGTVAVRQRGKGDIGAVKMDEFIAKIEDE 629


>gi|296331396|ref|ZP_06873868.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305676383|ref|YP_003868055.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|296151511|gb|EFG92388.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305414627|gb|ADM39746.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 638

 Score =  586 bits (1511), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 288/634 (45%), Positives = 422/634 (66%), Gaps = 16/634 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSI 59
           M   + +  PDG IK +P   T  + A SIS SL KKA A  +NGK+ DLS  + E   +
Sbjct: 1   MSKHVHIQLPDGQIKEYPKGITIKEAAGSISSSLQKKAAAGQVNGKLVDLSFKLEEDAEL 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            I+T +    L V+RH+ AH++A+AV+ ++ EV + IGP+IEDGFYYD   EQ  +S +L
Sbjct: 61  SIVTLDSQEGLQVLRHTSAHVLAQAVKRLYGEVSLGIGPVIEDGFYYDMKLEQSLTSGDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEK+M+ II  +    +  +S+E+A ELF  K E +K+E+L+ IP  E++TLY+QGE+
Sbjct: 121 EAIEKEMKNIINENLEIKRIEVSYEEAEELFAKKGEPFKLEMLKDIPRGEDITLYQQGEF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPH+ STG +K F KL +V+GAYWRGDS   +L R+YG A+  +++L  +L+ LE
Sbjct: 181 VDLCRGPHLPSTGMIKAF-KLTRVSGAYWRGDSENEVLQRVYGVAFQKKKDLDAHLHTLE 239

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+ KRDHRKL ++++LF  +E+  G+ F+  KG  I   L  + R  + K  YEE+ TP 
Sbjct: 240 EAAKRDHRKLGKQLELFMFSEEAPGMPFYLPKGQIIRNELERFSRELQTKAGYEEVRTPF 299

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +++Q LW+QSGHWD YR NM+  +  DDT      FA+KPMNCPGH+ +F + L SYR+L
Sbjct: 300 MMNQRLWEQSGHWDHYRDNMYFSEV-DDT-----RFAMKPMNCPGHMLIFKNSLYSYRDL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG V+R+E SG+L+G++RVR F QDDAH+F  ++Q+ +E  +   LI  +Y+ F
Sbjct: 354 PIRMAEFGQVHRHEYSGALNGMLRVRTFCQDDAHIFVREDQIESEIKEAIRLIDEVYRTF 413

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE   V+LSTRPE  +G D+LW+ +E  +  VL+ +  S +      V  G+GAFYGPK
Sbjct: 414 GFE-YSVELSTRPEDSLGDDSLWEASERALAYVLEELNLSYE------VNKGDGAFYGPK 466

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++ +KDA+ R  QC TIQ+DF +P +F+  Y+N H+EK  PV+IHRAVFGSI+RF GI+
Sbjct: 467 IDFHIKDALKRSHQCATIQLDFQMPEKFDLTYINEHNEKVRPVVIHRAVFGSIDRFFGIL 526

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+F G  P+WL+PIQ  +  ++    +Y +++   LK   +    D RNE + YKIRE 
Sbjct: 527 IEHFGGAFPVWLAPIQVQIIPVSHVHWDYCRKVQAELKRLGIRARIDERNEKLGYKIRES 586

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
            ++KIP +++ GD E  + ++ +R+FG    + V
Sbjct: 587 QVQKIPYVLVLGDHEEQKDAVNVRQFGDQLIEHV 620


>gi|198284332|ref|YP_002220653.1| threonyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC
           53993]
 gi|218666034|ref|YP_002426993.1| threonyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC
           23270]
 gi|259516307|sp|B7J7T0|SYT_ACIF2 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|259516338|sp|B5EN57|SYT_ACIF5 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|198248853|gb|ACH84446.1| threonyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC
           53993]
 gi|218518247|gb|ACK78833.1| threonyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC
           23270]
          Length = 644

 Score =  586 bits (1510), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 287/625 (45%), Positives = 409/625 (65%), Gaps = 18/625 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP DI+L  PDGS + F    TG  +A +I   LA+ AVA+ ++G + DLS  + ++  +
Sbjct: 1   MP-DIQL--PDGSHRQFAEPVTGLTLARAIGSGLARAAVAMRVDGILKDLSAVLDQDAEV 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            I+T +    L VIRHS AH++A+AVQS++PE QV IGP+I++GFYYDF   + F+ ++L
Sbjct: 58  AIVTRDSADGLEVIRHSTAHLLAQAVQSLYPEAQVTIGPVIDNGFYYDFAFPRGFTPEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IE +M  ++  + P  ++ LS E A  LFE   E YKVEI+ +IP  E ++LYRQG++
Sbjct: 118 EAIEARMHALVKENLPVQREMLSREDAIALFEKMGEDYKVEIIRAIPRGEPLSLYRQGDF 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV STG V   FKL +VAGAYWRGDS  PML RIYGTAW  Q++L  YL  L 
Sbjct: 178 VDLCRGPHVPSTG-VLGAFKLQRVAGAYWRGDSRNPMLQRIYGTAWAQQKDLDAYLQQLA 236

Query: 240 ESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTP 297
           E+EKRDHR++  E++LF I ED G G++FWH  G ++ + +  + +   ++  Y+ + TP
Sbjct: 237 EAEKRDHRRIGTELELFSIQEDAGGGLVFWHPMGSRVRRVIEDFWKEAHVEAGYDLLYTP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +  + LW  SGH D Y  +MF     D    + + + LKPMNCP H+ ++   L SYR+
Sbjct: 297 HIAHEQLWYTSGHKDFYSESMF-----DPMQDEGQAYQLKPMNCPFHILIYKDKLHSYRD 351

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R AE G+VYR+E SG+LHGLMRVRGFTQDDAHVFC  +Q+  E   +  L+  I   
Sbjct: 352 LPIRWAELGTVYRHEMSGALHGLMRVRGFTQDDAHVFCRPDQIEAEIGAVLVLVRKILGT 411

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF++  + LSTRP   VGSD +WD A   ++  L+      Q      V  G GAFYGP
Sbjct: 412 FGFDQYEINLSTRPGHSVGSDEIWDAATQALRNALERAGLEYQ------VDAGGGAFYGP 465

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  ++DAIGR WQC T+Q+DFNLP RF   YV     +  P+M+HRA+FGSIERF G+
Sbjct: 466 KIDLKIQDAIGRKWQCSTVQLDFNLPERFAMEYVAEDGARKVPIMVHRAIFGSIERFFGV 525

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE+++G  P+WL+P+QA+V  I+    EYA+ ++++L    +  ETD RNE I YKIR 
Sbjct: 526 LIEHYEGKFPVWLAPVQAVVLPISEHYSEYAESVSDVLVKRGIRAETDLRNEKIGYKIRA 585

Query: 598 HSIKKIPIIIICGDKEASERSIGIR 622
           H+++++P +++ G++E    ++ +R
Sbjct: 586 HTLRRVPYLLVVGEREKEAGTVAVR 610


>gi|320536876|ref|ZP_08036869.1| threonyl-tRNA synthetase [Treponema phagedenis F0421]
 gi|320146259|gb|EFW37882.1| threonyl-tRNA synthetase [Treponema phagedenis F0421]
          Length = 583

 Score =  585 bits (1509), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 280/559 (50%), Positives = 389/559 (69%), Gaps = 20/559 (3%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           L +IRHS AH+MA AV  ++   +VAIGP I+ GFYYDF+  +P + ++L  IEK+M++I
Sbjct: 9   LDMIRHSTAHVMAAAVTKLFKGTKVAIGPAIDYGFYYDFELPRPITDEDLLHIEKEMRKI 68

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
           +  +  F K+ ++ + A  LF  K + +K E++  +PA E +++YR G++ DLCRGPHV+
Sbjct: 69  VNGNHDFTKEVVTRDAALALF--KDQPFKTELINELPADEEISIYRSGDFVDLCRGPHVQ 126

Query: 190 STGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRK 248
           +T ++  + FKL K+AGAYWRGD  RPML+RIYGTAW    +L +YL  LE++EKRDHRK
Sbjct: 127 NTKEINAQSFKLTKIAGAYWRGDEKRPMLTRIYGTAWEKPADLKEYLAMLEDAEKRDHRK 186

Query: 249 LAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQ 307
           L +   LFH+ E+  G IFWH  GW ++  + +Y+R KIK D Y E+ TP V+ Q LW++
Sbjct: 187 LGKSFGLFHLDEENPGQIFWHPNGWALYLLVQNYVREKIKADGYLEVKTPFVMPQSLWER 246

Query: 308 SGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGS 367
           SGHW  YR NMF       T  + R FALKPMNCPGH+ +F  G+KSYR+LP+RLAEFGS
Sbjct: 247 SGHWAKYRENMFI------TESEKRLFALKPMNCPGHIEIFKQGIKSYRDLPLRLAEFGS 300

Query: 368 VYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF--EKIMV 425
             RNEPSGSLHG++RVRGF QDDAH+FCT+ Q+ +E  K   L+ ++Y DFGF  + I+V
Sbjct: 301 CTRNEPSGSLHGILRVRGFVQDDAHIFCTEAQISSEVKKFCALLKNMYADFGFAEDSILV 360

Query: 426 KLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKD 485
           K STRPEKRVG DA WD AE   K + D  K++    +   V  GEGAFYGPK E+ L D
Sbjct: 361 KFSTRPEKRVGDDATWDRAE---KALADACKDAG---LEYEVAEGEGAFYGPKLEFTLID 414

Query: 486 AIGRDWQCGTIQVDFNLPS--RFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           ++GR+WQCGTIQVD+ LPS  R NA Y+   ++K +PVM+HRA  GS+ERFIGI+IE++ 
Sbjct: 415 SLGREWQCGTIQVDYQLPSKERLNAEYIGEDNQKHNPVMLHRAALGSLERFIGILIEHYA 474

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WLSP+QA+V  +  +  +YA++ A  L +  L ++ D   + +N KIR++  ++I
Sbjct: 475 GAFPPWLSPLQAVVIPVAPTFNDYAEKTAKDLAAQGLRVKADIDTDRMNAKIRKYQEQRI 534

Query: 604 PIIIICGDKEASERSIGIR 622
           P  +I G+KEA+  S+ +R
Sbjct: 535 PYQLIVGEKEAANGSLAVR 553


>gi|229102972|ref|ZP_04233661.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-28]
 gi|228680387|gb|EEL34575.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-28]
          Length = 640

 Score =  585 bits (1508), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 286/633 (45%), Positives = 435/633 (68%), Gaps = 17/633 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N ++ DL   + E + +EIIT
Sbjct: 6   IEIKFPDGSVKEFVKGITLEEIAGSISSSLKKKAVAGKVNDQLYDLRRNIEENAEVEIIT 65

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +    + + RHS AHI+A+AV+ ++ ++ + +GP+IE+GFYYD D     + ++L +IE
Sbjct: 66  IDSNEGVEIARHSVAHILAQAVKRLYGDINLGVGPVIENGFYYDMDLPSSVNVEDLRKIE 125

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M+ II  +    +  +S E+A +LF+   +  K+E+LE+IP+ E+VTLY+QGE+ DLC
Sbjct: 126 KEMRNIIKENISIERVEVSREEAAKLFQEMNDRLKLELLEAIPSGESVTLYKQGEFVDLC 185

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV STG +K  F+L  V+GAYWRGDSN  +L RIYG A+ +Q+EL +YL+F+EE+ K
Sbjct: 186 RGPHVPSTGYLKA-FQLTHVSGAYWRGDSNNQVLQRIYGVAFFSQKELEEYLHFVEEAAK 244

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           R+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R   K+ +Y+E+ TP +++Q
Sbjct: 245 RNHRKLGNELELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQ 304

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            +W++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R+
Sbjct: 305 EVWERSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIRM 358

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG V+R+E SG+L+GL+RVR F QDDAH+F T EQ+ +E   +   I  +YK FGFE 
Sbjct: 359 CEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPEQIEDEIKSVMGQIDYVYKTFGFE- 417

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +G D LW+ AE  ++ VL ++  + + R+N     G+GAFYGPK ++ 
Sbjct: 418 YEVELSTRPEDSMGDDKLWEQAEAALENVLQSL--NYKYRLNE----GDGAFYGPKIDFH 471

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+ R  QCGTIQ+DF +P +F+  Y++  +EK  PV+IHRAV GS++RF+ I+IE+F
Sbjct: 472 IKDALNRSHQCGTIQLDFQMPEKFDLNYIDEKNEKKRPVVIHRAVLGSLDRFLAILIEHF 531

Query: 543 KGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            G  P W++P+Q  V  ++++  V+YA E+A+ L    + IE D R+E + YKIRE  ++
Sbjct: 532 GGAFPAWVAPVQVKVIPVSNAVHVQYANEVADKLAQAGVRIERDMRDEKLGYKIREAQMQ 591

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           KIP +++ GDKE    S+ +R++G   ++ V+L
Sbjct: 592 KIPYVLVIGDKEMENGSVNVRKYGEEKSEVVAL 624


>gi|153955810|ref|YP_001396575.1| threonyl-tRNA synthetase [Clostridium kluyveri DSM 555]
 gi|219856177|ref|YP_002473299.1| hypothetical protein CKR_2834 [Clostridium kluyveri NBRC 12016]
 gi|189083603|sp|A5N258|SYT_CLOK5 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|254783517|sp|B9E5W0|SYT_CLOK1 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|146348668|gb|EDK35204.1| ThrS [Clostridium kluyveri DSM 555]
 gi|219569901|dbj|BAH07885.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 637

 Score =  585 bits (1508), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 288/622 (46%), Positives = 411/622 (66%), Gaps = 16/622 (2%)

Query: 25  DVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIRHSCAHIMAE 83
           D+A  +S SL+KKA+   ++GKV +L+  + ++  +EI+T ED     ++RH+ +HI+A+
Sbjct: 22  DIAAKLSISLSKKALGAVVDGKVVELNYKINKDCKVEILTFEDEEGKKILRHTASHILAQ 81

Query: 84  AVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSH 143
           A++ ++PEV++AIGP I+ GFYYD D E  F+ + L +IE KM EII  +    +  L  
Sbjct: 82  AIKRLYPEVKLAIGPAIDSGFYYDVDAEFSFTPELLEKIEGKMNEIIKENIKLERFELPR 141

Query: 144 EKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKV 203
           E+A +  E K E YKVE+++ +P    ++ Y+QG++ DLC GPHV STG+ K   KL+ +
Sbjct: 142 EEAIKFMEEKNEPYKVELIKDLPEDSIISFYKQGDFVDLCAGPHVPSTGRAKAV-KLLSI 200

Query: 204 AGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGS 263
           AGAYWRG+ N  ML RIYGT +  + +L  YL  +EE++KRDHRKL +E+DLF I E+G 
Sbjct: 201 AGAYWRGNENNKMLQRIYGTVFEKKSDLQDYLKLMEEAKKRDHRKLGKELDLFSIHEEGP 260

Query: 264 GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK 322
           G  F+H KG  I  TL ++ R    K DY EI TP +L++ LW +SGHWD Y+ NM+  K
Sbjct: 261 GFPFFHPKGMVIRNTLQNFWREMHYKADYSEIMTPIILNEELWHRSGHWDHYKENMYFTK 320

Query: 323 CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMR 382
             D        +A+KPMNCPG + V+ + ++SYR+LP R AE G V+R+E SG+LHGLMR
Sbjct: 321 IDDGN------YAIKPMNCPGSILVYKNDIRSYRDLPKRYAEMGVVHRHEKSGALHGLMR 374

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWD 442
           VR FTQDDAH+F TK+ + +E +K+ +LI + YK FGFE   V+LSTRPE  +GSD  W+
Sbjct: 375 VRCFTQDDAHIFVTKDDIADEIIKVIDLIDNFYKIFGFE-YFVELSTRPEDSMGSDEDWE 433

Query: 443 DAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNL 502
            A   +K  L  +       ++  +  G+GAFYGPK ++ LKD IGR WQCGT+Q+DF +
Sbjct: 434 AATEGLKNALKMVG------LDYKINEGDGAFYGPKIDFHLKDCIGRTWQCGTVQLDFQM 487

Query: 503 PSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITS 562
           P +F+  Y+ +  EK  PVMIHR VFGSIERFIGI+IE++ G  P W++P+Q  V  IT 
Sbjct: 488 PEKFDLNYIGADGEKHRPVMIHRVVFGSIERFIGILIEHYAGAFPAWIAPVQVQVMNITD 547

Query: 563 SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           +  +Y  E+A  LK +++ +E D RNE I YKIRE  + K+P +II GDKE  +++I +R
Sbjct: 548 AQADYVAEVAKTLKENNIRVECDIRNEKIGYKIREAQMHKVPYMIILGDKEMKDKNISVR 607

Query: 623 RFGSTTTQKVSLLDAIPILTKE 644
                    +SL D I  L +E
Sbjct: 608 SRKEGDIGAMSLEDFILKLKEE 629


>gi|294792093|ref|ZP_06757241.1| threonine--tRNA ligase [Veillonella sp. 6_1_27]
 gi|294457323|gb|EFG25685.1| threonine--tRNA ligase [Veillonella sp. 6_1_27]
          Length = 641

 Score =  585 bits (1508), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 284/647 (43%), Positives = 412/647 (63%), Gaps = 19/647 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEI 61
           +D+K+  PDGS K +    T  +  + +S SLAKK +A  +NG++ DL + + +GS +  
Sbjct: 7   ADVKIILPDGSAKEYAAGTTLGEAVKQLSNSLAKKVLAANVNGELTDLREELVDGSEVAF 66

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +T E+      +RH+ +HI+A+AV+ +WPE ++AIGP I+ GFYYD D E   + ++L +
Sbjct: 67  LTFEEDGGKHTLRHTASHILAQAVKRLWPEAKLAIGPAIDKGFYYDIDMEHTLTPEDLGK 126

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK+M  I+  + P  K  +  ++A E F++K E YKVE+++ +P    ++ Y QG++ D
Sbjct: 127 IEKEMSRIVKENLPITKSVMPRQEAIEFFKAKNEDYKVELIQDLPEDAVISCYSQGDFID 186

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LC GPHV STG+VK F KL  +AGAYWRGD    ML RIYGTA+  ++EL  YL+ LEE+
Sbjct: 187 LCAGPHVASTGKVKAF-KLQSIAGAYWRGDEKNKMLQRIYGTAFEKKEELDAYLHLLEEA 245

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
            KRDHRKL +E+ LF I E+G G  F+  KG  +   L ++ R    D DYEEI TP +L
Sbjct: 246 AKRDHRKLGKELGLFVIKEEGPGFPFFLPKGMALRNELENFWREVHHDFDYEEIRTPIIL 305

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            +HLW+ SGHWD YR NM+       TI D   +A+KPMNCPG + V+ + + SYR+ P+
Sbjct: 306 SKHLWETSGHWDHYRENMYT------TIIDDEEYAIKPMNCPGGILVYQNEMHSYRDFPL 359

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R AE G V+R+E SG+LHGL RVR FTQDDAHVF   +QM  E +K+  L   IY  FG 
Sbjct: 360 RYAELGLVHRHELSGALHGLFRVRAFTQDDAHVFMLPDQMQTELMKVIELFDRIYSQFGL 419

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
            K  V+LST+P+  +G DA+W+ A   ++  ++         I   +  G+GAFYGPK +
Sbjct: 420 -KYHVELSTKPDNAMGDDAIWEAATEALRNAIEA------KGIPYVINPGDGAFYGPKLD 472

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           Y ++D++GR WQCGTIQ+D NLP RF   Y+    +K  P+MIHRA FGS+ERFIGI+ E
Sbjct: 473 YHIEDSLGRTWQCGTIQLDMNLPERFQIEYIGEDGQKHRPIMIHRACFGSMERFIGILTE 532

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           ++ G  P W++P+Q  +  I+   VEYA+E+A  +   ++ +E D R+E I YKIR+  +
Sbjct: 533 HYAGAFPTWMAPVQVKILPISEKHVEYAKELAKQMHRDYVRVEVDDRSEKIGYKIRQAQM 592

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKV---SLLDAIPILTKE 644
            K+P +++ GDKE  E ++ +R+ G      V      ++I I  KE
Sbjct: 593 AKVPYMLVVGDKEVEEGTVNVRKHGGDELGSVPFEEFFNSIKIEIKE 639


>gi|282850470|ref|ZP_06259849.1| threonine--tRNA ligase [Veillonella parvula ATCC 17745]
 gi|282579963|gb|EFB85367.1| threonine--tRNA ligase [Veillonella parvula ATCC 17745]
          Length = 636

 Score =  584 bits (1506), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 285/648 (43%), Positives = 415/648 (64%), Gaps = 21/648 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEI 61
           +D+K+  PDGS K +    T  +  + +S SLAKK +A  +NG++ DL + + +GS +  
Sbjct: 2   ADVKIILPDGSAKEYAAGTTLGEAVKQLSNSLAKKVLAANVNGELTDLREELVDGSEVAF 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +T E+      +RH+ +HI+A+AV+ +WPE ++AIGP I+ GFYYD D E   + ++L +
Sbjct: 62  LTFEEDGGKHTLRHTASHILAQAVKRLWPEAKLAIGPAIDKGFYYDIDMEHTLTPEDLGK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK+M  I+  + P  K  +  ++A + F++K E YKVE+++ +P    ++ Y QG++ D
Sbjct: 122 IEKEMSRIVKENLPITKSVMPRQEAIDFFKAKNEDYKVELIQDLPEDAVISCYSQGDFID 181

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LC GPHV STG+VK F KL  +AGAYWRGD    ML RIYGTA+  ++EL  YL+ LEE+
Sbjct: 182 LCAGPHVASTGKVKAF-KLQSIAGAYWRGDEKNKMLQRIYGTAFEKKEELDAYLHMLEEA 240

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
            KRDHRKL +E+ LF I E+G G  F+  KG  +   L ++ R    D DYEEI TP +L
Sbjct: 241 AKRDHRKLGKELGLFVIKEEGPGFPFFLPKGMALRNELENFWREVHHDFDYEEIRTPIIL 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            +HLW+ SGHWD YR NM+       TI D   +A+KPMNCPG + V+ + + SYR+ P+
Sbjct: 301 SKHLWETSGHWDHYRENMYT------TIIDDEEYAIKPMNCPGGILVYQNEMHSYRDFPL 354

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R AE G V+R+E SG+LHGL RVR FTQDDAHVF   +QM  E +K+  L   IY  FG 
Sbjct: 355 RYAELGLVHRHELSGALHGLFRVRAFTQDDAHVFMLPDQMQTELMKVIELFDRIYSQFGL 414

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR-INTGVLLGEGAFYGPKF 479
            K  V+LST+P+  +G DA+W+ A        D ++N+ + + I   +  G+GAFYGPK 
Sbjct: 415 -KYHVELSTKPDNAMGDDAIWEQA-------TDALRNAIEAKGIPYVINPGDGAFYGPKL 466

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +Y ++D++GR WQCGTIQ+D NLP RF   Y+    +K  P+MIHRA FGS+ERFIGI+ 
Sbjct: 467 DYHIEDSLGRTWQCGTIQLDMNLPERFQIEYIGEDGQKHRPIMIHRACFGSMERFIGILT 526

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E++ G  P W++P+Q  +  I+   VEYA+E+A  +   ++ +E D R+E I YKIR+  
Sbjct: 527 EHYAGAFPTWMAPVQVKILPISEKHVEYAKELAKQMHRDYVRVEVDDRSEKIGYKIRQAQ 586

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKV---SLLDAIPILTKE 644
           + K+P +++ GDKE  E ++ +R+ G      V      ++I I  KE
Sbjct: 587 MAKVPYMLVVGDKEVEEGTVNVRKHGGDELGSVPFEEFFNSIKIEIKE 634


>gi|229115852|ref|ZP_04245250.1| Threonyl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|228667595|gb|EEL23039.1| Threonyl-tRNA synthetase [Bacillus cereus Rock1-3]
          Length = 640

 Score =  584 bits (1506), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 285/633 (45%), Positives = 436/633 (68%), Gaps = 17/633 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           I++ FPDGS+K F    T  ++A SIS SL +KAVA  +N ++ DL   + E + +EIIT
Sbjct: 6   IEIKFPDGSVKEFVKGITLEEIAGSISSSLKRKAVAGKVNDQLYDLRRNIEENAEVEIIT 65

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +    + + RHS AHI+A+AV+ ++ ++ + +GP+IE+GFYYD D     + ++L +IE
Sbjct: 66  IDSNDGVEIARHSAAHILAQAVKRLYGDINLGVGPVIENGFYYDMDLPSSVNVEDLPKIE 125

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M+ II  +    +  +S E+A +LF+   +  K+E+LE+IP+ E+VTLY+QGE+ DLC
Sbjct: 126 KEMRNIIKENISIERVEVSREEAAKLFQEMNDRLKLELLEAIPSGESVTLYKQGEFVDLC 185

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV STG +K  F+L  V+GAYWRGDSN  +L RIYG A+++Q+EL +YL+F+EE+ K
Sbjct: 186 RGPHVPSTGYLKA-FQLTHVSGAYWRGDSNNQVLQRIYGVAFSSQKELEEYLHFVEEAAK 244

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           R+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R   K+ +Y+E+ TP +++Q
Sbjct: 245 RNHRKLGNELELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQ 304

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            +W++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R+
Sbjct: 305 EVWERSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIRM 358

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG V+R+E SG+L+GL+RVR F QDDAH+F T EQ+ +E   +   I  +YK FGFE 
Sbjct: 359 CEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPEQIEDEIKSVMGQIDYVYKTFGFE- 417

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +G D LW+ AE  ++ VL ++  + + R+N     G+GAFYGPK ++ 
Sbjct: 418 YEVELSTRPEDSMGDDKLWEQAEAALENVLQSL--NYKYRLNE----GDGAFYGPKIDFH 471

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+ R  QCGTIQ+DF +P +F+  Y++  +EK  PV+IHRAV GS++RF+ I+IE+F
Sbjct: 472 IKDALNRSHQCGTIQLDFQMPEKFDLNYIDVKNEKKRPVVIHRAVLGSLDRFLAILIEHF 531

Query: 543 KGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            G  P W++P+Q  V  ++++  V+YA E+A+ L    + IE D R+E + YKIRE  ++
Sbjct: 532 GGAFPAWVAPVQVKVIPVSNAVHVQYANEVADKLAQAGVRIERDVRDEKLGYKIREAQMQ 591

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           KIP +++ GDKE    S+ +R++G   ++ V+L
Sbjct: 592 KIPYVLVIGDKEMENGSVNVRKYGEEKSEVVAL 624


>gi|229133217|ref|ZP_04262049.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
 gi|228650236|gb|EEL06239.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
          Length = 639

 Score =  584 bits (1506), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 288/645 (44%), Positives = 439/645 (68%), Gaps = 18/645 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           I++ FPDGS+K F    T  ++A +IS SL KKAVA  +N K  DL   + E + +EIIT
Sbjct: 6   IEIKFPDGSVKEFVKGITLEEIAGAISSSLKKKAVAGKVNDKSFDLRRNIEESAKVEIIT 65

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +    + + RHS AHI+A+AV+ I+ +V + +GP+IE+GFYYD D +   + ++L +IE
Sbjct: 66  MDSDEGVKIARHSAAHILAQAVKRIYGDVNLGVGPVIENGFYYDMDLQSSVNVEDLPKIE 125

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M+ II  +    +  +S E+A+ELF+   ++ K+E+LE+IP  E+VTLY+QGE+ DLC
Sbjct: 126 KEMKNIINENVKIERVEVSREEAKELFQEMNDSLKLELLEAIPNGESVTLYKQGEFVDLC 185

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG +K  F+L  V+GAYWRGDSN  +L RIYG A+++QQ+L +YL+F+EE+ K
Sbjct: 186 RGPHLPSTGYLKA-FQLTHVSGAYWRGDSNNQVLQRIYGVAFSSQQKLEEYLHFVEEAAK 244

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           R+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R    + +Y+E+ TP +++Q
Sbjct: 245 RNHRKLGSELELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQNEYNYQEVRTPFMMNQ 304

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R+
Sbjct: 305 ELWEKSGHWGHYKDNMYFSEV------DHKSFALKPMNCPGHMLMFKNKLHSYRELPIRM 358

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG V+R+E SG+L+GL+RVR F QDDAH+F T EQ+ +E   +   I  +YK FGFE 
Sbjct: 359 CEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPEQIEDEIKSVLAQIDYVYKTFGFE- 417

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +G D LW+ AE  ++ VL ++  + + R+N     G+GAFYGPK ++ 
Sbjct: 418 YEVELSTRPEDSMGDDKLWEQAELALENVLQSL--NYKYRLNE----GDGAFYGPKIDFH 471

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+ R  QCGT+Q+DF +P +F+  Y++ ++EK  PV+IHRAV GS++RF+ I+IE+F
Sbjct: 472 IKDALNRSHQCGTVQLDFQMPEKFDLNYIDENNEKRRPVVIHRAVLGSLDRFLAILIEHF 531

Query: 543 KGNLPLWLSPIQAIVTTITSSAVE-YAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            G  P W++P+Q  V  ++++  E YA  IA+ L    + +E D R+E + YKIRE  ++
Sbjct: 532 GGAFPAWVAPVQVKVIPVSNAVHEKYANRIADKLAQAGIRVERDIRDEKLGYKIREAQMQ 591

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           K+P +++ GDKE    ++ +R++G   ++ V  LDA     KE +
Sbjct: 592 KVPYVLVIGDKEMESEAVNVRKYGEEKSEVVE-LDAFVESMKEEI 635


>gi|194017903|ref|ZP_03056511.1| threonyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
 gi|194010369|gb|EDW19943.1| threonyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
          Length = 642

 Score =  584 bits (1505), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 282/634 (44%), Positives = 430/634 (67%), Gaps = 18/634 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           +K+ FPDG IK F    T +D+A  IS SL KKAVA  IN ++ D+S  +  +  + I+T
Sbjct: 6   VKIQFPDGKIKEFSAGTTVADIASYISPSLRKKAVAGKINEQMVDVSHQLESDARLSIVT 65

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +    L V+RHS AH++A+AV+ ++  V + IGP+IE+GFYYD    Q  S ++LA IE
Sbjct: 66  LDSKEGLEVLRHSSAHVLAQAVKRLYDNVTLGIGPVIENGFYYDMKLNQTLSVEDLAAIE 125

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M+ II  +    ++ +S+E+A  +F    + YK++IL+ +P++E +T+Y+QGE+ DLC
Sbjct: 126 KEMENIINENHHIQRKEISYEEAESMF--AHDPYKLDILKRLPSEEAITVYQQGEFIDLC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG VK F KL +VAGAYWRGDS++ +L R+YG A+   ++L  YL+F+EE+ K
Sbjct: 184 RGPHLPSTGFVKSF-KLTRVAGAYWRGDSHQDVLQRVYGVAFQHPKQLANYLHFIEEASK 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           RDHRKL +++ LF  +E+  G+ F+  KG  +   L+++ R  + K  YEE++TP +++Q
Sbjct: 243 RDHRKLGKQLSLFMFSEEAPGMPFYLPKGQIVRNELMAFSREVRNKAQYEEVSTPFMMNQ 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y  NM+  +       D  +FALKPMNCPGH+ +F + L SYR+LP+R+
Sbjct: 303 ELWEKSGHWDHYHENMYFSEV------DHTSFALKPMNCPGHMLMFKNNLYSYRDLPIRM 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFG V+R+E SG+L+GL RVR F QDDAH+F  ++Q+  E  +I  L+  +Y+ FGFE 
Sbjct: 357 AEFGQVHRHEFSGALNGLFRVRTFCQDDAHIFLREDQIEAEIKRIFQLVDHVYRTFGFE- 415

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPEK +G DA+WD +E+ +K VLD +K   Q  +N G    +GAFYGPK ++ 
Sbjct: 416 YSVELSTRPEKALGDDAIWDISESALKNVLDRLKVDYQ--LNEG----DGAFYGPKIDFH 469

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+ R  QC TIQ+DF +P +F+  Y+N  +EK  PV+IH A+FGS++RF GI+IE+F
Sbjct: 470 IKDALQRSHQCATIQLDFQMPEKFDLTYINEKNEKVRPVVIHSAIFGSLDRFFGILIEHF 529

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  PLWL+P+Q  +  +T+  +++  E+   L+   + +  D R+E + YK+RE  ++K
Sbjct: 530 AGAFPLWLAPVQVQIIPVTTVHLDHCLEVQQQLRKIGIRVTIDERDEKLGYKMREAQMQK 589

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
           IP I + GD E  ++S+ IR+ G   ++++ + D
Sbjct: 590 IPYIAVIGDTEMQDKSLNIRQHGEKASKQLFIED 623


>gi|157691545|ref|YP_001486007.1| threonyl-tRNA synthetase [Bacillus pumilus SAFR-032]
 gi|157680303|gb|ABV61447.1| threonine--tRNA ligase [Bacillus pumilus SAFR-032]
          Length = 643

 Score =  583 bits (1504), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 282/634 (44%), Positives = 430/634 (67%), Gaps = 18/634 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           +K+ FPDG IK F    T +DVA  IS SL KKAVA  IN ++ D+S  +   + + I+T
Sbjct: 9   VKIQFPDGKIKEFSAGTTVADVASYISPSLRKKAVAGKINEQMVDVSHQLESDTRLSIVT 68

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +    L V+RH+ AH++A+AV+ ++  V + IGP+IE+GFYYD    Q  S ++LA IE
Sbjct: 69  LDSKEGLEVLRHTSAHVLAQAVKRLYGNVTLGIGPVIENGFYYDMKLNQTLSVEDLAAIE 128

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M+ II  +    ++ +S+++A  +FE   + YK++IL  +P++E +T+Y+QGE+ DLC
Sbjct: 129 KEMENIINENHLIQRKEISYKEAESMFEH--DPYKLDILNRLPSEEAITVYQQGEFIDLC 186

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG VK F KL +VAGAYWRGDS + +L R+YG A+   ++L +YL+F+EE+ K
Sbjct: 187 RGPHLPSTGFVKSF-KLTRVAGAYWRGDSQQDVLQRVYGVAFQHPKQLAEYLHFMEEASK 245

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           RDHRKL +++ LF  +E+  G+ F+  K   +   L+++ R  + K  YEE++TP +++Q
Sbjct: 246 RDHRKLGKQLSLFMFSEEAPGMPFYLPKSQIVRNELMAFSREVRSKAQYEEVSTPFMMNQ 305

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y  NM+  +       D  +FALKPMNCPGH+ +F + L SYR+LP+R+
Sbjct: 306 ELWEKSGHWDHYHENMYFSEV------DHTSFALKPMNCPGHMLMFKNSLFSYRDLPIRM 359

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFG V+R+E SG+L+GL RVR F QDDAH+F  ++Q+  E  +I  L+  +Y+ FGFE 
Sbjct: 360 AEFGQVHRHEFSGALNGLFRVRTFCQDDAHIFLREDQIEAEIKRIFQLVDHVYRTFGFE- 418

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPEK +G DA+WD +E+ +K VLD +K   Q  +N G    +GAFYGPK ++ 
Sbjct: 419 YSVELSTRPEKALGDDAIWDISESALKNVLDRLKVDYQ--LNEG----DGAFYGPKIDFH 472

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+ R  QC TIQ+DF +P +F+  Y+N  +EK  PV+IH A+FGS++RF+GI+IE+F
Sbjct: 473 IKDALQRSHQCATIQLDFQMPEKFDLTYINEKNEKVRPVVIHSAIFGSLDRFLGILIEHF 532

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  PLWL+P+Q  +  ++   +++  E+   L+   + +  D R+E + YK+RE  ++K
Sbjct: 533 AGAFPLWLAPVQVQIIPVSKIHLDHCLEVQQQLRKIGIRVTIDERDEKLGYKMREAQMQK 592

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
           IP I + GD E  E+++ IR+ G  T+ ++S+ D
Sbjct: 593 IPYIAVIGDTEMQEKTLNIRQHGEKTSNQLSIDD 626


>gi|189424928|ref|YP_001952105.1| threonyl-tRNA synthetase [Geobacter lovleyi SZ]
 gi|189421187|gb|ACD95585.1| threonyl-tRNA synthetase [Geobacter lovleyi SZ]
          Length = 646

 Score =  583 bits (1504), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 295/625 (47%), Positives = 418/625 (66%), Gaps = 22/625 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           S I++T PD SI+     AT +D+A SI   LAK A+A  +NG + DLS P+ +G ++ I
Sbjct: 12  SMIQVTLPDNSIRELADGATVADLAASIGAGLAKAALAGQVNGLLVDLSTPLADGDNVAI 71

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           IT + P +L +IRHS +H+MA+AV+ ++P  +V IGP +E+GFYYDFD   PF+ ++L +
Sbjct: 72  ITEKSPEALEIIRHSTSHLMAQAVKELFPAAKVTIGPAVENGFYYDFDVAAPFTPEDLEK 131

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK+M E+ A   P  ++ +S  +A   FE   E YK E++E I A E V++Y QGE+ D
Sbjct: 132 IEKRMAELAAAGQPLTRKVMSAAEAIAFFEQMGEPYKKELIEGIGA-ETVSIYTQGEFAD 190

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV +T ++K F KL+ +AGAYWRGD    ML RIYGTA+  ++EL  YL+ LEE+
Sbjct: 191 LCRGPHVPNTNKLKAF-KLLSIAGAYWRGDEKNRMLQRIYGTAFVDKKELEAYLHRLEEA 249

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK--IKDDYEEINTPQ 298
           ++RDHRKL RE+DLF   ++ G+G   WH KG  + +TL+    RK  +K DY+ +  PQ
Sbjct: 250 KRRDHRKLGRELDLFSFNDEVGAGFAIWHPKG-AMLRTLLEDFERKEHLKRDYDIVVGPQ 308

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L   LWQ+SGH+D+YR NM+  +       D ++F +KPMNC  H+ ++   L+SYR+L
Sbjct: 309 ILKTELWQRSGHYDNYRENMYFTEV------DEQSFGVKPMNCLSHMMIYKSQLRSYRDL 362

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P R  E G+V+R+E +G LHGL+RVR FTQDDAH+ CT EQ+  E   +   +  +   F
Sbjct: 363 PQRYFELGTVHRHERAGVLHGLLRVRCFTQDDAHILCTPEQLDAEIKGVLKFVSDVMGIF 422

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD-RINTGVLLGEGAFYGP 477
           GFE  M +LSTRPEK +GSD  W+ A   + G L   K++ +D  IN G    +GAFYGP
Sbjct: 423 GFEYEM-ELSTRPEKSIGSDEDWERATGALLGAL---KDTGRDFEINEG----DGAFYGP 474

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  L+D + R WQC TIQ DF LP RF+  YV S  EK  PVM+HR + GSIERFIG+
Sbjct: 475 KIDIKLRDCLDRRWQCATIQCDFTLPERFDLTYVASDGEKKRPVMVHRVILGSIERFIGV 534

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE+F GN PLWL+P+QA+V T+T + + YAQE+   L+S  + ++ D RNE +N+KIRE
Sbjct: 535 LIEHFAGNFPLWLAPVQAVVLTVTDNQIPYAQEVYKQLRSAGIRVQEDLRNEKLNFKIRE 594

Query: 598 HSIKKIPIIIICGDKEASERSIGIR 622
             ++KIP +++ GDKE  + ++  R
Sbjct: 595 AQLQKIPYMLVIGDKEVEQGTVTPR 619


>gi|309389087|gb|ADO76967.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Halanaerobium
           praevalens DSM 2228]
          Length = 643

 Score =  583 bits (1503), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 281/633 (44%), Positives = 416/633 (65%), Gaps = 19/633 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K+T PDGS++ +    T  DVA SI   L + A+A  +N K  D    + ++  + IIT
Sbjct: 4   VKVTLPDGSVREYEAGVTIKDVAYSIGSGLGRDAIAGIVNEKEVDADFKIEKDVELSIIT 63

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +   +L +IRH+ +H+MA+AV+ ++  VQVAIGP IEDGFYYDFD E+ F+ + L +IE
Sbjct: 64  IDSQEALEIIRHTASHVMAQAVKRLYDNVQVAIGPAIEDGFYYDFDLEETFNEESLVEIE 123

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M++II       K+ L  E+A EL +S+ E YK+E+++ +   + ++ Y QG++ DLC
Sbjct: 124 AEMKKIIEEAIKIEKKVLPREEAFELMKSRNEKYKLELIDELD-DQMISFYFQGDYVDLC 182

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG VK F KL+ VAGAYWRGD N  ML RIYGTA+  +++L +YL  +EE++K
Sbjct: 183 RGPHLPSTGYVKAF-KLLNVAGAYWRGDENNQMLQRIYGTAFAKEKDLEKYLNRVEEAKK 241

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQ 302
           RDHRKL +E+DLF + ++G G  F+H KG  +   L+ + + +  +  YEEI TP +LD+
Sbjct: 242 RDHRKLGKELDLFSMQDEGRGFPFFHPKGMALRNALVDFWKEEHYQAGYEEIQTPIILDE 301

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW QSGHWD Y+ NM+  K       D    A+KPMNCPG + V+   + SYRELP+R+
Sbjct: 302 SLWHQSGHWDHYQDNMYFTKI------DEEAHAVKPMNCPGGILVYKDSMHSYRELPIRM 355

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AE G V+R+E SG+LHGLMRVR FTQDDAH++C   Q+  E   +  L+  IY  FGF  
Sbjct: 356 AELGLVHRHEMSGALHGLMRVRSFTQDDAHIYCLPSQIETELSGVIKLVDKIYSAFGF-N 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LST+PEK +G DALW+ A + ++  ++  KN+    +N G    +GAFYGPK ++ 
Sbjct: 415 YNVELSTKPEKAMGDDALWNKATDALQNAIE--KNNLDYEVNAG----DGAFYGPKIDFH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+D++GR WQCGTIQ+DF +P RF+  Y+    E+  PVMIHRA++GSIERFIGI+IE+F
Sbjct: 469 LEDSLGRTWQCGTIQLDFQMPERFDLNYIGQDGEEHRPVMIHRAIYGSIERFIGILIEHF 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P W++P+Q  +  ++   ++YA ++   LK   + +E D R+E + YKIR+  +K+
Sbjct: 529 AGAFPTWMAPVQVEIIPVSDDQIDYAMQVKEELKQEKIRVEVDSRSEKVGYKIRDAQVKQ 588

Query: 603 IPIIIICGDKEASERSIGI--RRFGSTTTQKVS 633
           +P ++I G +E    ++ +  RR G   T  ++
Sbjct: 589 VPYMLIVGSREEDNGTVSVRDRREGDLGTSNLA 621


>gi|118580723|ref|YP_901973.1| threonyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
 gi|166225474|sp|A1ARE5|SYT_PELPD RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|118503433|gb|ABK99915.1| Ser-tRNA(Thr) hydrolase [Pelobacter propionicus DSM 2379]
          Length = 636

 Score =  583 bits (1503), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 283/624 (45%), Positives = 419/624 (67%), Gaps = 20/624 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEI 61
           S I +  PDGS +     +T +D+A SI   LAK A+A  ++G++ DLS  +++ S +EI
Sbjct: 2   SSISIALPDGSKREIASGSTIADLAASIGAGLAKAAIAGKLDGELVDLSTELKDDSRVEI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           IT + P +L VIRHS AH+MA+AV+ ++P+ +V IGP IE GFYYDFD + PF+ ++L +
Sbjct: 62  ITEKSPEALTVIRHSAAHLMAQAVKELFPQAKVTIGPAIESGFYYDFDMDAPFTPEDLER 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE +M E+ A +    ++ LS  +A  LF    E YKVE++  + A E V++Y QG++ D
Sbjct: 122 IEARMAELAAANQKIERRVLSSSEAVSLFSGMGENYKVELINDLAA-ETVSVYSQGDFAD 180

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ ST ++K F KL+ +AGAYWRGD    ML RIYGTA+  ++EL  YL+ LEES
Sbjct: 181 LCRGPHLPSTSRIKAF-KLLSIAGAYWRGDEKNRMLQRIYGTAFADKKELEAYLHRLEES 239

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQV 299
           ++RDHR+L RE+DLF  +++ G+G++ WH KG  +   L  + RR+ +K  Y+ +  PQ+
Sbjct: 240 KRRDHRRLGRELDLFSFSDEVGAGLVIWHPKGAMLRTILEDFERREHLKRGYDIVLGPQI 299

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           L + LWQ+SGH+++YR NM+  +       D +++ +KPMNC  H+ ++   L+SYR+LP
Sbjct: 300 LKKELWQRSGHYENYRENMYFTEV------DEQSYGIKPMNCLAHMMIYKSHLRSYRDLP 353

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R  E G+V+R+E +G LHGL+RVRGFTQDDAH+ C  EQ+  E   +   +  +   FG
Sbjct: 354 LRYFELGTVHRHERAGVLHGLLRVRGFTQDDAHILCAPEQLDGEIKGVLKFVSDVMAIFG 413

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD-RINTGVLLGEGAFYGPK 478
           FE  M +LSTRPEK +G DA W+ A    + +L  +K++ +   IN G    +GAFYGPK
Sbjct: 414 FEYEM-ELSTRPEKSIGDDAAWELA---TEALLSALKDTGRSFEINEG----DGAFYGPK 465

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +  LKDA+ R WQC TIQ DF LP RF+  YV +  EK  PVM+HR V G+IERFIG++
Sbjct: 466 IDIKLKDALDRRWQCATIQCDFTLPERFDLQYVAADGEKKRPVMVHRVVLGAIERFIGVL 525

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE++ GN PLWLSP+QA++ T+T + + YAQ +   L+   + ++ DFRNE +++KIRE 
Sbjct: 526 IEHYAGNFPLWLSPVQAMLVTVTDNHIPYAQGVLEHLREAGIRVQGDFRNEKLSFKIREA 585

Query: 599 SIKKIPIIIICGDKEASERSIGIR 622
            ++K+P +++ GDKE    ++  R
Sbjct: 586 QLQKVPYMLVIGDKEMESATVTPR 609


>gi|229017690|ref|ZP_04174581.1| Threonyl-tRNA synthetase [Bacillus cereus AH1273]
 gi|228743616|gb|EEL93725.1| Threonyl-tRNA synthetase [Bacillus cereus AH1273]
          Length = 639

 Score =  583 bits (1502), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 287/645 (44%), Positives = 438/645 (67%), Gaps = 18/645 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N +  DL   + E + +EI+T
Sbjct: 6   IEIKFPDGSVKEFVKGITLEEIAGSISSSLKKKAVAGKVNDQSFDLRRNIEESAKVEIVT 65

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +    + + RHS AHI+A+AV+ I+  V + +GP+IE+GFYYD D     + ++L +IE
Sbjct: 66  MDSDEGVKIARHSAAHILAQAVKRIYGNVNLGVGPVIENGFYYDMDLPSSVNVEDLPKIE 125

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M++II  +    +  +S E+A++LF+   +  K+E+LE+IP  E+VTLY+QGE+ DLC
Sbjct: 126 KEMKKIINENVRIERVEVSREEAKKLFKEMNDHLKLELLEAIPNGESVTLYKQGEFVDLC 185

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG +K  F+L  V+GAYWRGDSN  +L RIYG A+ +Q+EL +YL+F+EE+ K
Sbjct: 186 RGPHLPSTGYLKA-FQLTHVSGAYWRGDSNNQVLQRIYGVAFASQKELEEYLHFVEEAAK 244

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           R+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R   K+ +Y+E+ TP +++Q
Sbjct: 245 RNHRKLGSELELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQ 304

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R+
Sbjct: 305 ELWEKSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIRM 358

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG V+R+E SG+L+GL+RVR F QDDAH+F T EQ+ +E   +   I  +YK FGF+ 
Sbjct: 359 CEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPEQIEDEIKSVMAQIDYVYKTFGFQ- 417

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +G D LW+ AE  +  VL ++  + + R+N     G+GAFYGPK ++ 
Sbjct: 418 YEVELSTRPEDSMGDDKLWEQAEAALANVLQSL--NYKYRLNE----GDGAFYGPKIDFH 471

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+ R  QCGTIQ+DF +P +F+  Y++  +EK  PV+IHRAV GS++RF+ I+IE+F
Sbjct: 472 IKDALNRSHQCGTIQLDFQMPEKFDLNYIDEKNEKRRPVVIHRAVLGSLDRFLAILIEHF 531

Query: 543 KGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            G  P+W++P+Q  V  ++++  V+YA E+A+ L    + +E D R+E + YKIRE  ++
Sbjct: 532 GGAFPVWVAPVQVKVIPVSNAVHVQYANEVAHKLAQAGIRVEEDIRDEKLGYKIREAQMQ 591

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           K+P +++ GDKE    ++ +R++G   + K+  LDA     KE +
Sbjct: 592 KVPYVLVIGDKEMESEAVNVRKYGEEES-KIVELDAFVESMKEEM 635


>gi|229091361|ref|ZP_04222576.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-42]
 gi|228691990|gb|EEL45732.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-42]
          Length = 639

 Score =  582 bits (1500), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 283/633 (44%), Positives = 436/633 (68%), Gaps = 17/633 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N ++ DL   + E + +EIIT
Sbjct: 6   IEIKFPDGSVKEFVKGITLEEIAGSISSSLKKKAVAGNVNDELYDLRRNIEENAEVEIIT 65

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +    + + RHS AHI+A+AV+ ++ ++ + +GP+IE+GFYYD D     + ++L +IE
Sbjct: 66  IDSNEGVEIARHSAAHILAQAVKRLYGDINLGVGPVIENGFYYDMDLPSSVNVEDLRKIE 125

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M++II  +    +  +S E+A +LF+   +  K+E+LE+IP+ E+VTLY+QGE+ DLC
Sbjct: 126 KEMKKIINENIKIERVEVSREEAAKLFQEMNDRLKLELLEAIPSGESVTLYKQGEFVDLC 185

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG +K  F+L  V+GAYWRGDSN  +L RIYG A+++Q+EL +YL+F+EE+ K
Sbjct: 186 RGPHLPSTGYLKA-FQLTHVSGAYWRGDSNNQVLQRIYGVAFSSQKELEEYLHFVEEAAK 244

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           R+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R   K+ +Y+E+ TP +++Q
Sbjct: 245 RNHRKLGNELELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQ 304

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            +W++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R+
Sbjct: 305 EVWERSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIRM 358

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG V+R+E SG+L+GL+RVR F QDDAH+F T EQ+ +E   +   I  +YK FGFE 
Sbjct: 359 CEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPEQIEDEIKSVMAQIDYVYKTFGFE- 417

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +G D LW+ AE  ++ VL ++  + + R+N     G+GAFYGPK ++ 
Sbjct: 418 YEVELSTRPEDSMGDDKLWEQAEASLENVLQSL--NYKYRLNE----GDGAFYGPKIDFH 471

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+ R  QCGTIQ+DF +P +F+  Y++  +EK  PV+IHRAV GS++RF+ I+IE+F
Sbjct: 472 IKDALNRSHQCGTIQLDFQMPEKFDLNYIDEKNEKKRPVVIHRAVLGSLDRFLAILIEHF 531

Query: 543 KGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            G  P W++P+Q  V  ++++  V+YA E+A+ L    + +E D R+E + YKIRE  ++
Sbjct: 532 GGAFPTWVAPVQVKVIPVSNAVHVQYADEVADKLAQAGVRVERDMRDEKLGYKIREAQMQ 591

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           KIP +++ GDKE    ++ +R++G   ++ V L
Sbjct: 592 KIPYVLVIGDKEMENGAVNVRKYGEEKSEVVEL 624


>gi|321313312|ref|YP_004205599.1| threonyl-tRNA synthetase [Bacillus subtilis BSn5]
 gi|320019586|gb|ADV94572.1| threonyl-tRNA synthetase [Bacillus subtilis BSn5]
          Length = 638

 Score =  582 bits (1500), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 284/636 (44%), Positives = 419/636 (65%), Gaps = 16/636 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSI 59
           M   + +  PDG IK +P   T  + A SIS SL KKA A  +NGK+ DLS  + E   +
Sbjct: 1   MSKHVHIQLPDGQIKEYPKGITIKEAAGSISSSLQKKAAAGQVNGKLVDLSFKLEEDAKL 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            I+T +    L V+RH+  H++ +AV+ ++ EV + +GP+IEDGFYYD    +  +S +L
Sbjct: 61  SIVTLDSQEGLQVLRHTTVHVLVQAVKRLYGEVSLGVGPVIEDGFYYDMKLGKSLASGDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEK+M+ II  +    +  +S+E+A ELF  K E  K+EIL+ IP  E++TLY+QGE+
Sbjct: 121 EAIEKEMEHIINENLEIKRMEVSYEEAEELFAQKGERLKLEILKDIPRGEDITLYQQGEF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPH+ STG +K F KL +V+GAYWRGDS   +L R+YG A+  +++L  +L+ LE
Sbjct: 181 VDLCRGPHLPSTGMIKAF-KLTRVSGAYWRGDSKNEVLQRVYGVAFQKKKDLDAHLHMLE 239

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+ KRDHRKL +++ LF  +E+  G+ F+  KG  +   L  + R  +    Y+E+ TP 
Sbjct: 240 EAAKRDHRKLGKQLGLFMFSEEAPGMPFYLPKGQIVRNELERFSRELQTNAGYDEVRTPF 299

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +++Q LW+QSGHWD YR NM+  +  DDT      FA+KPMNCPGH+ +F + L SYR+L
Sbjct: 300 MMNQRLWEQSGHWDHYRDNMYFSEV-DDT-----RFAMKPMNCPGHMLIFKNSLYSYRDL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG V+R+E SG+L+G++RVR F QDDAH+F  ++Q+ +E  +   LI  +Y+ F
Sbjct: 354 PIRMAEFGQVHRHEYSGALNGMLRVRTFCQDDAHIFVREDQIESEIKEAIRLIDEVYRTF 413

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE   V+LSTRPE  +G D+LW+ +E  +  VL+ +  S +  IN G    +GAFYGPK
Sbjct: 414 GFE-YSVELSTRPEDSLGDDSLWEASERALARVLEELGLSYE--INEG----DGAFYGPK 466

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++ +KDA+ R  QC TIQ+DF +P +F+  Y+N H+EK  PV+IHRAVFGSI+RF GI+
Sbjct: 467 IDFHIKDALKRSHQCATIQLDFQMPEKFDLTYINEHNEKVRPVVIHRAVFGSIDRFFGIL 526

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE++ G  P+WL+PIQ  +  ++   ++Y +++   LK   +    D RNE + YKIRE 
Sbjct: 527 IEHYGGAFPVWLAPIQVQIIPVSHVHLDYCRKVQAELKQAGIRAGIDERNEKLGYKIRES 586

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
            ++KIP +++ GD E  E ++ +RRFG    + VS 
Sbjct: 587 QVQKIPYVLVLGDHEEQENAVNVRRFGHQQNEHVSF 622


>gi|206974097|ref|ZP_03235015.1| threonyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217959885|ref|YP_002338441.1| threonyl-tRNA synthetase [Bacillus cereus AH187]
 gi|229139078|ref|ZP_04267655.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
 gi|206748253|gb|EDZ59642.1| threonyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217066290|gb|ACJ80540.1| threonyl-tRNA synthetase [Bacillus cereus AH187]
 gi|228644433|gb|EEL00688.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
          Length = 639

 Score =  581 bits (1498), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 283/633 (44%), Positives = 434/633 (68%), Gaps = 17/633 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N  + DL   + E + +EI+T
Sbjct: 6   IEIKFPDGSVKEFVKGITLEEIAGSISSSLKKKAVAGKVNDGLYDLRRNIEENAEVEIVT 65

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +    + + RHS AHI+A+A++ I+  V + +GP+IE+GFYYD D     + ++L +IE
Sbjct: 66  IDSDEGVEIARHSAAHILAQAIKRIYGNVNLGVGPVIENGFYYDMDLPSSVNVEDLREIE 125

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M++II  +    +  +S E+A +LF+   +  K+E+LE+IP++E+VTLY+QGE+ DLC
Sbjct: 126 KEMKKIINENIKIERVEVSREEAAKLFQEMNDRLKLELLEAIPSEESVTLYKQGEFVDLC 185

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG +K  F+L  V+GAYWRGDSN  +L RIYG A+++Q+EL +YL+F+EE+ K
Sbjct: 186 RGPHLPSTGYLKA-FQLTHVSGAYWRGDSNNQVLQRIYGVAFSSQKELEEYLHFVEEAAK 244

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           R+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R   K+ +Y+E+ TP +++Q
Sbjct: 245 RNHRKLGSELELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQ 304

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            +W++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R+
Sbjct: 305 EVWERSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIRM 358

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG V+R+E SG+L+GL+RVR F QDDAH+F T EQ+ +E   +   I  +YK FGFE 
Sbjct: 359 CEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPEQIEDEIKSVMAQIDYVYKTFGFE- 417

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +G D LW+ AE  +  VL ++  + + R+N     G+GAFYGPK ++ 
Sbjct: 418 YEVELSTRPEDSMGDDKLWEQAEAALANVLHSL--NCKYRLNE----GDGAFYGPKIDFH 471

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+ R  QCGTIQ+DF +P +F+  Y++  +EK  PV+IHRAV GS++RF+ I+IE+F
Sbjct: 472 IKDALNRSHQCGTIQLDFQMPEKFDLNYIDEKNEKKRPVVIHRAVLGSLDRFLAILIEHF 531

Query: 543 KGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            G  P W++P+Q  V  ++++  V+YA E+A+ L    + +E D R+E + YKIRE  ++
Sbjct: 532 GGAFPAWVAPVQVKVIPVSNAVHVQYADEVADKLAQAGVRVERDVRDEKLGYKIREAQMQ 591

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           KIP +++ GDKE    ++ +R++G   ++ V L
Sbjct: 592 KIPYVLVIGDKEMENGAVNVRKYGEEKSEVVEL 624


>gi|308067332|ref|YP_003868937.1| Threonyl-tRNA synthetase 2 (threonine--tRNA ligase) (ThrRS)
           [Paenibacillus polymyxa E681]
 gi|305856611|gb|ADM68399.1| Threonyl-tRNA synthetase 2 (Threonine--tRNA ligase) (ThrRS)
           [Paenibacillus polymyxa E681]
          Length = 637

 Score =  581 bits (1498), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 284/644 (44%), Positives = 425/644 (65%), Gaps = 18/644 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           I++  PDG+++ +    T +DVA SIS  L K AVA  +NGK  DL+  + +   +EIIT
Sbjct: 3   IQVKLPDGAVREYEQGVTIADVAGSISSGLKKNAVAGKVNGKAVDLNTVLDQNVDLEIIT 62

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPE--VQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
            +    L + RHS AH++A+A++ I+ E  V++ IGP+I+ GFYYD D E P S D+LA+
Sbjct: 63  LDGADGLEIYRHSTAHLLAQALKRIYGEKNVKLGIGPVIDSGFYYDIDIENPLSVDDLAK 122

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK+M +I   + P  ++ +S E+A  +F   ++  K+E++  +P +  +T+Y QGE+FD
Sbjct: 123 IEKEMTKIAQENLPITRRVVSREEATRIFGELEDPLKLELIRDLPEEAEITIYDQGEFFD 182

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ STG++K F KL+ VAGAYWRGDSN  ML RIYGTA+  + +L ++L+ LEE+
Sbjct: 183 LCRGPHLPSTGRIKAF-KLLSVAGAYWRGDSNNKMLQRIYGTAFPKKAQLDEHLHLLEEA 241

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVL 300
           +KRDHRKL +E++LF  +E+  G+ F+  KG  +   L  Y R   +   YEE+ TP ++
Sbjct: 242 KKRDHRKLGKELELFMFSEEAPGMPFYLPKGMVVRTALEDYSRDIQRLHGYEEVRTPLMM 301

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  LW+QSGH++ Y+ NM+  +       D  TFALKPMNCPGH+ VF + L SYR+LP+
Sbjct: 302 NNRLWEQSGHYEHYKENMYFSEV------DETTFALKPMNCPGHMLVFKNELHSYRDLPI 355

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AEFG V+R+E SG+L+G+MRVR F QDDAH+F T  Q+  E   +  LI  +Y  FGF
Sbjct: 356 RIAEFGQVHRHELSGALNGMMRVRTFCQDDAHIFVTPGQIEQEITDVIKLINEMYSVFGF 415

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           +   V+LSTRP+  +G  ALWD AE  ++ VLD +       IN  +  G+GAFYGPK +
Sbjct: 416 D-FTVELSTRPDDFMGEPALWDQAEQALQNVLDHLG------INYRINAGDGAFYGPKID 468

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           + + DA+ R WQCGTIQ+DF +P +F+  YV   ++K  PV+IHRA++GSI+RF+GI+ E
Sbjct: 469 FHILDALKRSWQCGTIQLDFQMPEKFDLTYVGEDNQKHRPVVIHRAIYGSIDRFMGILTE 528

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +F G  PLWL+P+ A +  ++ + +E A EI + L    L +E D RNE + YKIRE  +
Sbjct: 529 HFTGAFPLWLAPVHAKLLPVSENYIETANEIQDALLKAGLRVEVDTRNEKLGYKIREAQL 588

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +K+P + + G+ E +  ++ +R+ G      +S+ D +  ++ E
Sbjct: 589 EKVPYMFVIGENEKTTGTVAVRKRGEGDLGSLSIADIVEKISTE 632


>gi|291486342|dbj|BAI87417.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. natto BEST195]
          Length = 638

 Score =  581 bits (1498), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 284/634 (44%), Positives = 421/634 (66%), Gaps = 16/634 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSI 59
           M   + +  PDG IK +P   T  + A SIS SL KKA A  +NGK+ DLS  + E   +
Sbjct: 1   MSKHVHIQLPDGQIKEYPKGITIKEAAGSISSSLQKKAAAGQVNGKLVDLSFKLEEDAEL 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            I+T +    L V+RH+ AH++A+AV+ ++ EV + +GP+IEDGFYYD    +  +S +L
Sbjct: 61  SIVTLDSQEGLQVLRHTSAHVLAQAVKRLYGEVSLGVGPVIEDGFYYDMKLGKSLASGDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEK+M+ II  +    +  +S+E+A ELF  K E  K+EIL+ IP  E++TLY+QGE+
Sbjct: 121 EAIEKEMKNIINENLEIKRIEVSYEEADELFAQKDERLKLEILKDIPRGEDITLYQQGEF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPH+ STG +K F KL +V+GAYWRGDS   +L R+YG A+  +++L  +L+ LE
Sbjct: 181 VDLCRGPHLPSTGMIKAF-KLTRVSGAYWRGDSKNEVLQRVYGVAFQKKKDLDAHLHMLE 239

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+ KRDHRKL +++ LF  +E+  G+ F+  KG  +   L  + R  +    Y E+ TP 
Sbjct: 240 EAAKRDHRKLGKQLGLFMFSEEAPGMPFYLPKGQIVRNELERFSRELQTNAGYNEVRTPF 299

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +++Q LW+QSGHWD YR NM+  +  DDT      FA+KPMNCPGH+ +F + L SYR+L
Sbjct: 300 MMNQRLWEQSGHWDHYRDNMYFSEV-DDT-----RFAMKPMNCPGHMLIFKNSLYSYRDL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG V+R+E SG+L+G++RVR F QDDAH+F  ++Q+ +E  +   LI  +Y+ F
Sbjct: 354 PIRMAEFGQVHRHEYSGALNGMLRVRTFCQDDAHIFVREDQIESEIKEAIRLIDEVYRTF 413

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE   V+LSTRPE  +G+D+LW+ +E  +  VL+ +  S +  IN G    +GAFYGPK
Sbjct: 414 GFE-YSVELSTRPEDSLGNDSLWEASERALARVLEELGLSYE--INEG----DGAFYGPK 466

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++ +KDA+ R  QC TIQ+DF +P +F+  Y+N H+EK  PV+IHRAVFGSI+RF GI+
Sbjct: 467 IDFHIKDALKRSHQCATIQLDFQMPEKFDLTYINEHNEKVRPVVIHRAVFGSIDRFFGIL 526

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE++ G  P+WL+P+Q  +  ++   ++Y +++   LK   +    D RNE + YKIRE 
Sbjct: 527 IEHYGGAFPVWLAPLQVQIIPVSHVHLDYCRKVQAELKQAGIRAGIDERNEKLGYKIRES 586

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
            ++KIP +++ GD E  E ++ +RRFG   ++ V
Sbjct: 587 QVQKIPYVLVLGDHEEQENAVNVRRFGHQQSEHV 620


>gi|238018994|ref|ZP_04599420.1| hypothetical protein VEIDISOL_00856 [Veillonella dispar ATCC 17748]
 gi|237864478|gb|EEP65768.1| hypothetical protein VEIDISOL_00856 [Veillonella dispar ATCC 17748]
          Length = 636

 Score =  581 bits (1498), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 284/647 (43%), Positives = 413/647 (63%), Gaps = 19/647 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEI 61
           +D+K+  PDGS K +    T  +  + +S SLAKK +A  +NG++ DL + + +GS +  
Sbjct: 2   ADVKIILPDGSAKEYAAGTTLGEAVKQLSNSLAKKVLAANVNGELTDLREELVDGSEVAF 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +T E+      +RH+ +HI+A+AV+ +WPE ++AIGP I+ GFYYD D E   + ++L +
Sbjct: 62  LTFEEDGGKHTLRHTASHILAQAVKRLWPEAKLAIGPAIDKGFYYDIDMEHTLTPEDLGK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK+M  I+  + P  K  +S ++A E F+SK E YKVE++E +P    ++ Y QG++ D
Sbjct: 122 IEKEMSRIVKENLPITKSVMSRQEAIEFFKSKNEDYKVELIEDLPEDAVISCYAQGDFID 181

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LC GPHV STG+VK F KL  +AGAYWRGD    ML RIYGTA+  ++EL  YL+ LEE+
Sbjct: 182 LCAGPHVASTGKVKAF-KLQSIAGAYWRGDEKNKMLQRIYGTAFEKKEELDAYLHLLEEA 240

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
            KRDHRKL +E+ LF I E+G G  F+  KG  +   L ++ R    + DYEEI TP +L
Sbjct: 241 AKRDHRKLGKELGLFVIKEEGPGFPFFLPKGMALRNELENFWREVHHEFDYEEIRTPIIL 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ LW+ SGHW  YR NM+       TI D   +A+KPMNCPG + V+ + + SYR+ P+
Sbjct: 301 NKQLWETSGHWFHYRENMYT------TIIDDEEYAIKPMNCPGGILVYQNEMHSYRDFPL 354

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R AE G V+R+E SG+LHGL RVR FTQDDAHVF   +QM +E +K+  L   IY  FG 
Sbjct: 355 RYAELGLVHRHELSGALHGLFRVRAFTQDDAHVFMLPDQMQSELMKVIELFDRIYSQFGL 414

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
            K  V+LST+P+  +G DA+W+ A   ++  ++         I   +  G+GAFYGPK +
Sbjct: 415 -KYHVELSTKPDNAMGDDAIWEAATEALRNAIEA------KGIPYVINPGDGAFYGPKLD 467

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           Y ++D++GR WQCGTIQ+D NLP RF   YV    +K  P+MIHRA FGS+ERFIGI+ E
Sbjct: 468 YHIEDSLGRTWQCGTIQLDMNLPERFQIEYVGEDGQKHRPIMIHRACFGSMERFIGILTE 527

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           ++ G  P W++P+Q  +  I+   VEYA+E+A  +   ++ +E D R+E I YKIR+  +
Sbjct: 528 HYAGAFPTWMAPVQVKILPISEKHVEYAKELAKQMHRDYVRVEVDDRSEKIGYKIRQAQM 587

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKV---SLLDAIPILTKE 644
            K+P +++ GDKE  E ++ +R+ G      +      ++I I  KE
Sbjct: 588 AKVPYMLVVGDKEVEEGTVNVRKHGGDELGSIPFDEFFNSIKIEIKE 634


>gi|150018038|ref|YP_001310292.1| threonyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
 gi|149904503|gb|ABR35336.1| threonyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
          Length = 635

 Score =  581 bits (1497), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 295/642 (45%), Positives = 425/642 (66%), Gaps = 16/642 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           I +   DGSIK     ++  D+A SIS++LAK AV   +NG + DL+  ++    + I+T
Sbjct: 2   INIKLKDGSIKEIADESSIYDLANSISKNLAKVAVVGEVNGTLVDLNYKLKNNDEVNILT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D +++ VIRHS +H+MA+AV+ I+ + ++AIGP I +GFYYDFD E   S+++L +IE
Sbjct: 62  YDDEKAVEVIRHSTSHVMAQAVKRIYKDSKLAIGPAINNGFYYDFDIENSLSNEDLDKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M +II  +  F +  +S ++A +L E K E YKVE+++ +P  E ++LY+QG++ DLC
Sbjct: 122 AEMNKIIDENLSFERIDISRDEAIKLMEEKGETYKVELIKDLPEAEKISLYKQGDYIDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ ST  +K F KL+ VAGAYWRG+    ML R+YG A+++++EL  +L+ LEE++K
Sbjct: 182 RGPHIPSTKYIKAF-KLLSVAGAYWRGNEKNKMLQRVYGVAFSSKKELEVHLHNLEEAKK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           RDHRKL +E+ LF  AE+G G  F   KG  +  TLI + R+   +D Y EI TP +L++
Sbjct: 241 RDHRKLGKELKLFTFAEEGPGFPFMLPKGVILKNTLIDFWRKLHYEDGYVEIETPIMLNK 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW  YR NM+          D   FALKPMNCPG + V+     SYR+ P+R+
Sbjct: 301 KLWETSGHWYHYRENMYTSSI------DEEEFALKPMNCPGGMLVYKSESHSYRDFPMRV 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            E G V+R+E SG+LHGLMRVR FTQDDAH+F   +Q+ +E   + NLI  +Y  FGF K
Sbjct: 355 GELGRVHRHELSGALHGLMRVRAFTQDDAHIFMLPDQIKSEIKGVINLIDKVYSKFGF-K 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             ++LSTRPE  +GSD  W+ AE+ +KG LD +  + + +IN G    +GAFYGPK ++ 
Sbjct: 414 YNLELSTRPEDSMGSDEEWELAESSLKGALDEL--NLEYKINEG----DGAFYGPKIDFH 467

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+D+IGR WQCGTIQ+DF LP RF   YV S  EK  P++IHR VFGSIERFIGI+IE+F
Sbjct: 468 LEDSIGRTWQCGTIQLDFQLPQRFELEYVGSDGEKHRPIVIHRVVFGSIERFIGILIEHF 527

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WLSP+Q  +  I++    Y+++I + L S  + +E D ++E I YKIRE   ++
Sbjct: 528 AGKFPTWLSPVQVKILPISNKFNSYSEKIKDKLSSEGIRVEIDQKDEKIGYKIREARNER 587

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P III G+KEA+E +I +R   +     ++L D I  +  E
Sbjct: 588 VPYIIIVGEKEAAENNISLRSRSNGDEGTLNLEDLIERINNE 629


>gi|196043419|ref|ZP_03110657.1| threonyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|196025728|gb|EDX64397.1| threonyl-tRNA synthetase [Bacillus cereus 03BB108]
          Length = 639

 Score =  581 bits (1497), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 282/633 (44%), Positives = 435/633 (68%), Gaps = 17/633 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N ++ DL   + E + +EIIT
Sbjct: 6   IEIKFPDGSVKEFVKGITLEEIAGSISSSLKKKAVAGKVNDELYDLRRNIEENAEVEIIT 65

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +    + + RHS AHI+A+AV+ ++ ++ + +GP+IE+GFYYD D     + ++L +IE
Sbjct: 66  IDSNEGVEIARHSAAHILAQAVKRLYGDINLGVGPVIENGFYYDMDFPSSVNVEDLRKIE 125

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M++II  +    +  +S E+A +LF+   +  K+E+LE+IP+ E+VTLY+QGE+ DLC
Sbjct: 126 KEMKKIINENIKIERVEVSREEAAKLFQEMNDRLKLELLEAIPSGESVTLYKQGEFVDLC 185

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG +K  F+L  V+GAYWRGDSN  +L RIYG A+++Q+EL +YL+F+EE+ K
Sbjct: 186 RGPHLPSTGYLKA-FQLTHVSGAYWRGDSNNQVLQRIYGVAFSSQKELEEYLHFVEEAAK 244

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           R+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R   K+ +Y+E+ TP +++Q
Sbjct: 245 RNHRKLGNELELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQ 304

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            +W++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R+
Sbjct: 305 EVWERSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIRM 358

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG V+R+E SG+L+GL+RVR F QDDAH+F T EQ+ +E   +   I  +YK FGFE 
Sbjct: 359 CEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPEQIEDEIKSVMAQIDYVYKTFGFE- 417

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +G D LW+ AE  ++ VL ++  + + R+N     G+GAFYGPK ++ 
Sbjct: 418 YEVELSTRPEDSMGDDKLWEQAEASLENVLQSL--NYKYRLNE----GDGAFYGPKIDFH 471

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+ R  QCGTIQ+DF +P +F+  Y++  +EK  PV+IHRAV GS++RF+ I+IE+F
Sbjct: 472 IKDALNRSHQCGTIQLDFQMPEKFDLNYIDEKNEKKRPVVIHRAVLGSLDRFLAILIEHF 531

Query: 543 KGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            G  P W++P+Q  V  ++++  V+YA E+A+ L    + +E D R+E + YKIRE  ++
Sbjct: 532 GGAFPAWVAPVQVKVIPVSNAVHVQYADEVADKLAQAGVRVERDMRDEKLGYKIREAQMQ 591

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           K+P I++ GDKE    ++ +R++G   +  + L
Sbjct: 592 KVPYILVIGDKEMENGAVNVRKYGEEKSDVIEL 624


>gi|229060032|ref|ZP_04197403.1| Threonyl-tRNA synthetase [Bacillus cereus AH603]
 gi|228719251|gb|EEL70859.1| Threonyl-tRNA synthetase [Bacillus cereus AH603]
          Length = 639

 Score =  581 bits (1497), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 284/633 (44%), Positives = 434/633 (68%), Gaps = 17/633 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N +  DL   + E + +EIIT
Sbjct: 6   IEIKFPDGSVKEFVKGITLEEIAGSISSSLKKKAVAGKVNDQSFDLRRNIEESAKVEIIT 65

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +    + + RHS AHI+A+AV+ I+  V++ +GPIIE+GFYYD D     + ++L +IE
Sbjct: 66  MDSDEGVKIARHSAAHILAQAVKRIYGNVKLGVGPIIENGFYYDMDLPSSVNVEDLPKIE 125

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M++II  +    +  +S E+ ++LF+   +  K+E+LE+IP  E+VT+Y+QGE+ DLC
Sbjct: 126 KEMKKIINENVKIERVEVSREEVKKLFQEMNDHLKLELLEAIPNDESVTIYKQGEFVDLC 185

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG +K  F+L  V+GAYWRGDSN  +L RIYG A+++Q+EL ++L+F+EE+ K
Sbjct: 186 RGPHLPSTGYLKA-FQLTHVSGAYWRGDSNNQVLQRIYGVAFSSQKELEKHLHFVEEAAK 244

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           R+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R  + + +Y+E+ TP +++Q
Sbjct: 245 RNHRKLGSELELFMFSEEAPGMPFYLPKGQIIRNELEAFLRGIQNEYNYQEVRTPFMMNQ 304

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R+
Sbjct: 305 ELWEKSGHWGHYKDNMYFSEV------DHKSFALKPMNCPGHMLMFKYKLHSYRELPIRM 358

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG V+R+E SG+L+GL+RVR F QDDAH+F T EQ+ +E   +   I  +YK FGFE 
Sbjct: 359 CEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPEQIEDEIKSVMAQIDYVYKTFGFE- 417

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +G D LW  AE  ++ VL ++  + + R+N     G+GAFYGPK ++ 
Sbjct: 418 YEVELSTRPEDSMGDDKLWKQAEAALENVLHSL--NYKYRLNE----GDGAFYGPKIDFH 471

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+ R  QCGTIQ+DF +P +F+  Y++  +EK  PV+IHRAV GS++RF+ I+IE+F
Sbjct: 472 IKDALNRSHQCGTIQLDFQMPEKFDLNYIDEKNEKRRPVVIHRAVLGSLDRFLAILIEHF 531

Query: 543 KGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            G  P W++P+Q  V  ++++  VEYA E+A+ L    + +E D R+E + YKIRE  ++
Sbjct: 532 GGAFPAWVAPVQVKVIPVSNAVHVEYANEVADKLAQAGIRVERDIRDEKLGYKIREAQMQ 591

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           K+P +++ GDKE    ++ IR++G   ++ V+L
Sbjct: 592 KVPYVLVIGDKEMESEAVNIRKYGEEKSEVVAL 624


>gi|78222623|ref|YP_384370.1| threonyl-tRNA synthetase [Geobacter metallireducens GS-15]
 gi|78193878|gb|ABB31645.1| Ser-tRNA(Thr) hydrolase [Geobacter metallireducens GS-15]
          Length = 645

 Score =  581 bits (1497), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 288/630 (45%), Positives = 417/630 (66%), Gaps = 21/630 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
            DIK+  PDGS +     AT  D+A SI   LAK A+A  ING   DL+ P+ +G  +EI
Sbjct: 11  GDIKVALPDGSERVLAEGATVRDLAASIGAGLAKAAIAGKINGVAVDLTAPLVDGVKVEI 70

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           IT + P +L +IRHS +H+MA+AV+ ++P+ +V IGP +E+GFYYDFD +  F+ ++L +
Sbjct: 71  ITEKSPEALEIIRHSTSHLMAQAVKELFPQAKVTIGPAVENGFYYDFDVDHAFTPEDLEK 130

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE +M+E+   D    +Q LS ++A +LF    E YKVE++E+I     V+LYRQG++ D
Sbjct: 131 IETRMRELAKSDLKLERQVLSKDEAIKLFRDMGENYKVELIEAI-GDNTVSLYRQGDFVD 189

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ ST   + F KL  +AGAYWRGD    ML R+YGTA+  ++EL  YL  +EE+
Sbjct: 190 LCRGPHLPSTANCRAF-KLTSLAGAYWRGDEKNKMLQRVYGTAFADKKELDAYLERIEEA 248

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQV 299
           ++RDHRKL RE+DLF  +++ G+G + WH  G  +   L  + R++ +K  Y+ +  PQ+
Sbjct: 249 KRRDHRKLGRELDLFSFSDEVGAGFVIWHPNGAMLRTILEDFERKEHLKRGYDIVVGPQI 308

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           L   LWQ+SGH+D+YR NM+  +  +      ++F +KPMNC  H+ ++   L+SYR+LP
Sbjct: 309 LKTDLWQRSGHYDNYRENMYFTEVEE------QSFGIKPMNCLSHMMIYKSHLRSYRDLP 362

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R  E G+V+R+E +G LHGL+RVR FTQDDAH+ CT EQ+ +E   + + +  +   FG
Sbjct: 363 LRFFELGTVHRHERAGVLHGLLRVRCFTQDDAHILCTPEQLDDEIKGVISFVNDVMGIFG 422

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD-RINTGVLLGEGAFYGPK 478
           FE  M +LSTRPEK +GSD  W+ A N + G L   K+S +   IN G    +GAFYGPK
Sbjct: 423 FEFEM-ELSTRPEKSIGSDEDWERATNALLGAL---KDSGRPYEINEG----DGAFYGPK 474

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +  L+D++ R WQC TIQ DF LP RF+  YV++  E+  PVM+HR + GSIERFIG++
Sbjct: 475 IDIKLRDSLDRRWQCATIQCDFTLPERFDLTYVDADGERKRPVMVHRVILGSIERFIGVL 534

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+F GN P+WLSP+QAIV T+T +   YA ++   L+S  + +  DFRNE + +KIRE 
Sbjct: 535 IEHFAGNFPVWLSPVQAIVMTVTDNQQSYAAQVFEALRSSGIRVRKDFRNEKLGFKIREA 594

Query: 599 SIKKIPIIIICGDKEASERSIGIR-RFGST 627
            ++KIP +++ GDKE    ++  R R GS 
Sbjct: 595 QLQKIPYMLVIGDKEVESGTVTPRFRDGSN 624


>gi|229178727|ref|ZP_04306091.1| Threonyl-tRNA synthetase [Bacillus cereus 172560W]
 gi|228604885|gb|EEK62342.1| Threonyl-tRNA synthetase [Bacillus cereus 172560W]
          Length = 640

 Score =  580 bits (1496), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 282/633 (44%), Positives = 436/633 (68%), Gaps = 17/633 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N  + DL   + E + +EIIT
Sbjct: 6   IEIKFPDGSVKEFVNGVTLEEIAGSISSSLKKKAVAGKVNDGLYDLRRNIEENAEVEIIT 65

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +    + + RHS AHI+A+AV+ ++ ++ + +GP+IE+GFYYD D     + ++L +IE
Sbjct: 66  IDSNEGVEIARHSAAHILAQAVKRLYGDINLGVGPVIENGFYYDMDLPSSVNIEDLRKIE 125

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M++II  +    +  +S E+A +LF+   +  K+E+LE+IP+ E+VTLY+QGE+ DLC
Sbjct: 126 KEMKKIINENIKIERVEVSREEAAKLFQEMNDRLKLELLEAIPSGESVTLYKQGEFVDLC 185

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG +K  F+L  V+GAYWRGDSN  +L RIYG A+++Q+EL +YL+F+EE+ K
Sbjct: 186 RGPHLPSTGYLKA-FQLTHVSGAYWRGDSNNQVLQRIYGVAFSSQKELEEYLHFVEEAAK 244

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           R+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R   K+  Y+E+ TP +++Q
Sbjct: 245 RNHRKLGSELELFMFSEEAPGMPFYLPKGQMIRNELEAFLREIQKEYKYQEVRTPFMMNQ 304

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            +W++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R+
Sbjct: 305 EVWERSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIRM 358

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG V+R+E SG+L+GL+RVR F QDDAH+F T +Q+ +E   +   I  +YK FGFE 
Sbjct: 359 CEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPKQIEDEIKSVMAQIDYVYKTFGFE- 417

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +G D LW+ AE  ++ VL ++  + + R+N     G+GAFYGPK ++ 
Sbjct: 418 YEVELSTRPEDSMGDDKLWEQAEAALENVLQSL--NYKYRLNE----GDGAFYGPKIDFH 471

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+ R  QCGTIQ+DF +P +F+  Y++ ++EK  PV+IHRAV GS++RF+ I+IE+F
Sbjct: 472 IKDALNRSHQCGTIQLDFQMPEKFDLNYIDENNEKKRPVVIHRAVLGSLDRFLAILIEHF 531

Query: 543 KGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            G  P W++P+Q  V  ++++  V+YA E+A+ L    + +E D R+E + YKIRE  ++
Sbjct: 532 GGAFPAWVAPVQVKVIPVSNAVHVQYADEVADKLAQAGVRVERDVRDEKLGYKIREAQMQ 591

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           K+P I++ GDKE    ++ +R++G   ++ V+L
Sbjct: 592 KVPYILVIGDKEMENGAVNVRKYGEEKSEVVTL 624


>gi|297617667|ref|YP_003702826.1| threonyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
 gi|297145504|gb|ADI02261.1| threonyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
          Length = 636

 Score =  580 bits (1496), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 278/621 (44%), Positives = 412/621 (66%), Gaps = 16/621 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +++T  DG ++++P   T + V + +   L  +A+AV  NGK+ DL+ P+  +G +EI+T
Sbjct: 2   LRITLGDGKVRDYPEGTTFAQVVQDLGGRLMSEALAVRFNGKLMDLAAPIPADGRLEILT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            ED     V RHS AH+MA+AV+ ++P  ++AIGP I+ GFYYDFD EQPF+ ++  +IE
Sbjct: 62  FEDEDGREVYRHSSAHVMAQAVKRLFPGTRLAIGPAIDKGFYYDFDPEQPFTPEDFDRIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           ++MQ II+ D P +++ +S E+A ELF    E YKVE++E +   E +++Y+QGE+ DLC
Sbjct: 122 QEMQSIISADYPIVRKEISREEALELFSGLGETYKVELIEGLAEGETISVYQQGEFIDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+ STG++K F KLM +AGAYWRGD    ML RIY T++  +  L  YLY LEE++K
Sbjct: 182 AGPHLMSTGKIKAF-KLMSLAGAYWRGDERNKMLQRIYATSFPKKSMLDDYLYKLEEAKK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQ 302
           RDHR+L RE+ LF + ++G G  F+  KG  I   L ++ R++ +K  Y+EI TP +L++
Sbjct: 241 RDHRRLGRELGLFVVLDEGPGFPFFLPKGMIIRNELENFWRQEHVKAGYQEIKTPIILNR 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHW+ YR NM+       T  D   +A+KPMNCPG + V+   L SYRELP+RL
Sbjct: 301 SLWEKSGHWEHYRENMYF------TTIDEEDYAVKPMNCPGGILVYKQNLHSYRELPIRL 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            E G V+R+E SG LHGLMRVR FTQDDAH+F    Q+  E   + +++   Y+ FGF  
Sbjct: 355 GELGLVHRHEKSGVLHGLMRVRAFTQDDAHIFMLPSQITQEIKGVIDMVDHFYRLFGF-S 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LST+PEK +GSD +W+ A   ++  L+  +   + +IN G    +GAFYGPK ++ 
Sbjct: 414 YHVELSTKPEKAMGSDEIWEKATGALRQALE--EKGMEYKINEG----DGAFYGPKIDFH 467

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+D++ R WQCGTIQ+DF +P +F+  YV    EK  PVMIHR ++GS+ERFIGI+ E+F
Sbjct: 468 LRDSLDRTWQCGTIQLDFLMPEKFDLTYVGEDGEKHRPVMIHRVIYGSLERFIGILTEHF 527

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P+Q  +  IT     YA E+    +   L +E+D R+E + YKIRE  +++
Sbjct: 528 GGAFPTWLAPVQVRIIPITERHHGYAVELEAGFREAGLRVESDLRSEKVGYKIREGQLQR 587

Query: 603 IPIIIICGDKEASERSIGIRR 623
           IP +++ GDKE   +++ +R+
Sbjct: 588 IPYLLVVGDKETENKTVSVRK 608


>gi|228985474|ref|ZP_04145631.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228774239|gb|EEM22648.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 639

 Score =  580 bits (1496), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 282/633 (44%), Positives = 434/633 (68%), Gaps = 17/633 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N  + DL   + E + +EI+T
Sbjct: 6   IEIKFPDGSVKEFVKGITLEEIAGSISSSLKKKAVAGKVNDGLYDLRRNIEENAEVEIVT 65

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +    + + RHS AHI+A+A++ I+  V + +GP+IE+GFYYD D     + ++L +IE
Sbjct: 66  IDSNEGVEIARHSAAHILAQAIKRIYGNVNLGVGPVIENGFYYDMDLPSSVNVEDLREIE 125

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M++II  +    +  +S E+A +LF+   +  K+E+LE+IP++E+VTLY+QGE+ DLC
Sbjct: 126 KEMKKIINENIKIERVEVSREEAAKLFQEMNDRLKLELLEAIPSEESVTLYKQGEFVDLC 185

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG +K  F+L  V+GAYWRGDSN  +L RIYG A+++Q+EL +YL+F+EE+ K
Sbjct: 186 RGPHLPSTGYLKA-FQLTHVSGAYWRGDSNNQVLQRIYGVAFSSQKELEEYLHFVEEAAK 244

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           R+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R   K+ +Y+E+ TP +++Q
Sbjct: 245 RNHRKLGSELELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQ 304

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            +W++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R+
Sbjct: 305 EVWERSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIRM 358

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG V+R+E SG+L+GL+RVR F QDDAH+F T EQ+ +E   +   I  +YK FGFE 
Sbjct: 359 CEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPEQIEDEIKSVMAQIDYVYKTFGFE- 417

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +G D LW+ AE  +  VL ++  + + R+N     G+GAFYGPK ++ 
Sbjct: 418 YEVELSTRPEDSMGDDKLWEQAEAALANVLHSL--NYKYRLNE----GDGAFYGPKIDFH 471

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+ R  QCGTIQ+DF +P +F+  Y++  +EK  PV+IHRAV GS++RF+ I+IE+F
Sbjct: 472 IKDALNRSHQCGTIQLDFQMPEKFDLNYIDEKNEKRRPVVIHRAVLGSLDRFLAILIEHF 531

Query: 543 KGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            G  P W++P+Q  V  ++++  V+YA EIA+ L    + +E D R+E + YKIRE  ++
Sbjct: 532 GGAFPAWVAPVQVKVIPVSNAVHVQYADEIADKLAQAGVRVERDVRDEKLGYKIREAQMQ 591

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           K+P +++ GDKE    ++ +R++G   ++ + L
Sbjct: 592 KVPYVLVIGDKEMENGAVNVRKYGEEKSEVIEL 624


>gi|42781481|ref|NP_978728.1| threonyl-tRNA synthetase [Bacillus cereus ATCC 10987]
 gi|42737404|gb|AAS41336.1| threonyl-tRNA synthetase [Bacillus cereus ATCC 10987]
          Length = 640

 Score =  580 bits (1495), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 283/633 (44%), Positives = 434/633 (68%), Gaps = 17/633 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N  + DL   + E + +EIIT
Sbjct: 6   IEIKFPDGSVKEFVKGITLEEIAGSISNSLKKKAVAGKVNDGLYDLRRNIEENAEVEIIT 65

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +    + + RHS AHI+A+AV+ ++ ++ + +GP+IE+GFYYD D     + ++L +IE
Sbjct: 66  IDSDEGVEIARHSAAHILAQAVKRLYGDINLGVGPVIENGFYYDMDLPSSVNIEDLRKIE 125

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M++II  +    +  +S E+A +LF+   +  K+E+LE+IP+ E+VTLY+QGE+ DLC
Sbjct: 126 KEMKKIINENIKIERVEVSREEAAKLFQEMNDRLKLELLEAIPSGESVTLYKQGEFVDLC 185

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG +K  F+L  V+GAYWRGDSN  +L RIYG A+ +Q+EL +YL+F+EE+ K
Sbjct: 186 RGPHLPSTGYLKA-FQLTHVSGAYWRGDSNNQVLQRIYGVAFASQKELEEYLHFVEEAAK 244

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           R+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R   K+  Y+E+ TP +++Q
Sbjct: 245 RNHRKLGSELELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYKYQEVRTPFMMNQ 304

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R+
Sbjct: 305 ELWEKSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIRM 358

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG V+R+E SG+L+GL+RVR F QDDAH+F T EQ+ +E   +   I  +YK FGF+ 
Sbjct: 359 CEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPEQIEDEIKSVMAQIDYVYKTFGFQ- 417

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +G D LW+ AE+ +  VL ++  + + R+N     G+GAFYGPK ++ 
Sbjct: 418 YEVELSTRPEDSMGDDKLWEQAESALANVLHSL--NYKYRLNE----GDGAFYGPKIDFH 471

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+ R  QCGTIQ+DF +P +F+  Y++  +EK  PV+IHRAV GS++RF+ I+IE+F
Sbjct: 472 IKDALNRSHQCGTIQLDFQMPEKFDLNYIDEKNEKKRPVVIHRAVLGSLDRFLAILIEHF 531

Query: 543 KGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            G  P W++P+Q  V  ++++  V+YA E+A+ L    + +E D R+E + YKIRE  ++
Sbjct: 532 GGAFPAWVAPVQVKVIPVSNAVHVQYADEVADKLAQAGVRVERDVRDEKLGYKIREAQMQ 591

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           KIP +++ GDKE    ++ +R++G   ++ V+L
Sbjct: 592 KIPYVLVIGDKELENGAVNVRKYGGEKSEVVAL 624


>gi|313892956|ref|ZP_07826533.1| threonine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
 gi|313442309|gb|EFR60724.1| threonine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
          Length = 636

 Score =  580 bits (1495), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 284/647 (43%), Positives = 413/647 (63%), Gaps = 19/647 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEI 61
           +D+K+  PDGS K +    T  +  + +S SLAKK +A  +NG++ DL + + +GS +  
Sbjct: 2   ADVKIILPDGSAKEYAAGTTLGESVKQLSNSLAKKVLAANVNGELTDLREELVDGSEVAF 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +T E+      +RH+ +HI+A+AV+ +WPE ++AIGP I+ GFYYD D E   + ++L +
Sbjct: 62  LTFEEDGGKHTLRHTASHILAQAVKRLWPEAKLAIGPAIDKGFYYDIDMEHTLTPEDLGK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK+M  I+  + P  K  +S ++A E F+SK E YKVE+++ +P    ++ Y QG++ D
Sbjct: 122 IEKEMSRIVKENLPITKSVMSRQEAIEFFKSKNEDYKVELIQDLPEDAVISCYSQGDFID 181

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LC GPHV STG+VK F KL  +AGAYWRGD    ML RIYGTA+  ++EL  YL+ LEE+
Sbjct: 182 LCAGPHVASTGKVKAF-KLQSIAGAYWRGDEKNKMLQRIYGTAFEKKEELDAYLHLLEEA 240

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
            KRDHRKL +E+ LF I E+G G  F+  KG  +   L ++ R    + DYEEI TP +L
Sbjct: 241 AKRDHRKLGKELGLFVIKEEGPGFPFFLPKGMALRNELENFWREVHHEFDYEEIRTPIIL 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ LW+ SGHW  YR NM+       TI D   +A+KPMNCPG + V+ + + SYR+ P+
Sbjct: 301 NKQLWETSGHWFHYRENMYT------TIIDDEEYAIKPMNCPGGILVYQNEMHSYRDFPL 354

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R AE G V+R+E SG+LHGL RVR FTQDDAHVF   +QM +E +K+  L   IY  FG 
Sbjct: 355 RYAELGLVHRHELSGALHGLFRVRAFTQDDAHVFMLPDQMQSELMKVIELFDRIYSQFGL 414

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
            K  V+LST+P+  +G DA+W+ A   ++  ++         I   +  G+GAFYGPK +
Sbjct: 415 -KYHVELSTKPDNAMGDDAIWEAATEALRNAIEA------KGIPYVINPGDGAFYGPKLD 467

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           Y ++D++GR WQCGTIQ+D NLP RF   YV    +K  P+MIHRA FGS+ERFIGI+ E
Sbjct: 468 YHIEDSLGRTWQCGTIQLDMNLPERFQIDYVGEDGQKHRPIMIHRACFGSMERFIGILTE 527

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           ++ G  P W++P+Q  +  I+   VEYA+E+A  +   ++ +E D R+E I YKIR+  +
Sbjct: 528 HYAGAFPTWMAPVQVKILPISEKHVEYAKELAKQMHRDYVRVEVDDRSEKIGYKIRQAQM 587

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKV---SLLDAIPILTKE 644
            K+P +++ GDKE  E ++ +R+ G      V      ++I I  KE
Sbjct: 588 AKVPYMLVVGDKEVEEGTVNVRKHGGDELGSVPFEEFFNSIKIEIKE 634


>gi|49479942|ref|YP_036488.1| threonyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|218903521|ref|YP_002451355.1| threonyl-tRNA synthetase [Bacillus cereus AH820]
 gi|228927442|ref|ZP_04090498.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|229121934|ref|ZP_04251153.1| Threonyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|49331498|gb|AAT62144.1| threonine--tRNA ligase (threonyl-tRNA synthetase) [Bacillus
           thuringiensis serovar konkukian str. 97-27]
 gi|218538936|gb|ACK91334.1| threonyl-tRNA synthetase [Bacillus cereus AH820]
 gi|228661583|gb|EEL17204.1| Threonyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|228832235|gb|EEM77816.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
          Length = 639

 Score =  580 bits (1495), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 281/633 (44%), Positives = 435/633 (68%), Gaps = 17/633 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N ++ DL   + E + +EIIT
Sbjct: 6   IEIKFPDGSVKEFVKGITLEEIAGSISSSLKKKAVAGNVNDELYDLRRNIEENAEVEIIT 65

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +    + + RHS AHI+A+AV+ ++ ++ + +GP+IE+GFYYD D     + ++L +IE
Sbjct: 66  IDSNEGVEIARHSAAHILAQAVKRLYGDINLGVGPVIENGFYYDMDLPSSVNVEDLRKIE 125

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M++II  +    +  +S E+A +LF+   +  K+E+LE+IP+ E+VTLY+QGE+ DLC
Sbjct: 126 KEMKKIINENIKVERVEVSREEAAKLFQEMNDRLKLELLEAIPSGESVTLYKQGEFVDLC 185

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG +K  F+L  V+GAYWRGDSN  +L RIYG A+++Q+EL +YL+F+EE+ K
Sbjct: 186 RGPHLPSTGYLKA-FQLTHVSGAYWRGDSNNQVLQRIYGVAFSSQKELEEYLHFVEEAAK 244

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           R+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R   K+ +Y+E+ TP +++Q
Sbjct: 245 RNHRKLGNELELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQ 304

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            +W++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R+
Sbjct: 305 EVWERSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIRM 358

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG V+R+E SG+L+GL+RVR F QDDAH+F T EQ+ +E   +   I  +YK FGF K
Sbjct: 359 CEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPEQIEDEIKSVMAQIDYVYKTFGF-K 417

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +G D LW+ AE  ++ VL ++  + + R+N     G+GAFYGPK ++ 
Sbjct: 418 YEVELSTRPEDSMGDDKLWEQAEASLENVLQSL--NYKYRLNE----GDGAFYGPKIDFH 471

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+ R  QCGTIQ+DF +P +F+  Y++  +EK  PV+IHRAV GS++RF+ I+IE+F
Sbjct: 472 IKDALNRSHQCGTIQLDFQMPEKFDLNYIDEKNEKKRPVVIHRAVLGSLDRFLAILIEHF 531

Query: 543 KGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            G  P W++P+Q  V  ++++  V+YA E+A+ L    + +E D R+E + YKIRE  ++
Sbjct: 532 GGAFPAWVAPVQVKVIPVSNAVHVQYADEVADKLAQAGVRVERDMRDEKLGYKIREAQMQ 591

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           K+P +++ GDKE    ++ +R++G   +  + L
Sbjct: 592 KVPYVLVIGDKEMENGAVNVRKYGEEKSDVIEL 624


>gi|229155963|ref|ZP_04284064.1| Threonyl-tRNA synthetase [Bacillus cereus ATCC 4342]
 gi|228627570|gb|EEK84296.1| Threonyl-tRNA synthetase [Bacillus cereus ATCC 4342]
          Length = 639

 Score =  580 bits (1495), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 282/633 (44%), Positives = 434/633 (68%), Gaps = 17/633 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N  + DL   + E + +EI+T
Sbjct: 6   IEIKFPDGSVKEFVKGITLEEIAGSISSSLKKKAVAGKVNDGLYDLRRNIEENAEVEIVT 65

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +    + + RHS AHI+A+A++ I+  V + +GP+IE+GFYYD D     + ++L +IE
Sbjct: 66  IDSNEGVEIARHSAAHILAQAIKRIYGNVNLGVGPVIENGFYYDMDLPSSVNVEDLREIE 125

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M++II  +    +  +S E+A +LF+   +  K+E+LE+IP++E+VTLY+QGE+ DLC
Sbjct: 126 KEMKKIINENIKIERVEVSREEAAKLFQEMNDHLKLELLEAIPSEESVTLYKQGEFVDLC 185

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG +K  F+L  V+GAYWRGDSN  +L RIYG A+++Q+EL +YL+F+EE+ K
Sbjct: 186 RGPHLPSTGYLKA-FQLTHVSGAYWRGDSNNQVLQRIYGVAFSSQKELEEYLHFVEEAAK 244

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           R+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R   K+ +Y+E+ TP +++Q
Sbjct: 245 RNHRKLGSELELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQ 304

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            +W++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R+
Sbjct: 305 EVWERSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIRM 358

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG V+R+E SG+L+GL+RVR F QDDAH+F T EQ+ +E   +   I  +YK FGFE 
Sbjct: 359 CEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPEQIEDEIKSVMAQIDYVYKTFGFE- 417

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +G D LW+ AE  +  VL ++  + + R+N     G+GAFYGPK ++ 
Sbjct: 418 YEVELSTRPEDSMGDDKLWEQAEAALANVLHSL--NYKYRLNE----GDGAFYGPKIDFH 471

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+ R  QCGTIQ+DF +P +F+  Y++  +EK  PV+IHRAV GS++RF+ I+IE+F
Sbjct: 472 IKDALNRSHQCGTIQLDFQMPEKFDLNYIDEKNEKRRPVVIHRAVLGSLDRFLAILIEHF 531

Query: 543 KGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            G  P W++P+Q  V  ++++  V+YA EIA+ L    + +E D R+E + YKIRE  ++
Sbjct: 532 GGAFPAWVAPVQVKVIPVSNAVHVQYADEIADKLAQAGVRVERDVRDEKLGYKIREAQMQ 591

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           K+P +++ GDKE    ++ +R++G   ++ + L
Sbjct: 592 KVPYVLVIGDKEMENGAVNVRKYGEEKSEVIEL 624


>gi|253700848|ref|YP_003022037.1| threonyl-tRNA synthetase [Geobacter sp. M21]
 gi|259516486|sp|C6DYJ5|SYT_GEOSM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|251775698|gb|ACT18279.1| threonyl-tRNA synthetase [Geobacter sp. M21]
          Length = 636

 Score =  580 bits (1495), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 282/625 (45%), Positives = 420/625 (67%), Gaps = 22/625 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEI 61
           ++I +T PDGS +  P  A+  D+A SI   LAK A+A  I+G + DL+ P+ +G+ +EI
Sbjct: 2   NEINVTLPDGSQRPLPAGASIFDLAASIGAGLAKAAIAGKIDGNLVDLNTPLADGARVEI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +T + P +L +IRHS +H+MA+AV++++P+ +V IGP IE GFYYDFD + PF+ ++L +
Sbjct: 62  VTEKSPEALEIIRHSTSHLMAQAVKALFPQAKVTIGPAIETGFYYDFDVDHPFTPEDLEK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE+KM+E+   D    ++ L+   A  LF+   E YKVE++E + A + V+LY QG++ D
Sbjct: 122 IEEKMRELAKADLKIERRELTSADAIALFKGMGEDYKVELIEDLGA-DKVSLYSQGDFVD 180

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+  T  +K F KL  +AGAYWRGD  R ML R+YGTA+  ++EL  YL  +EE+
Sbjct: 181 LCRGPHLPKTSYIKAF-KLTSIAGAYWRGDEKRAMLQRVYGTAFGDKKELEAYLARIEEA 239

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK--IKDDYEEINTPQ 298
           +KRDHRKL RE+DLF   ++ G+G++ WH KG  + +T++    RK  +K  Y+ +  PQ
Sbjct: 240 KKRDHRKLGRELDLFSFNDEVGAGLVIWHPKG-AMLRTILEDFERKEHLKRGYDIVLGPQ 298

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L   LWQ+SGH+++YR NM+       T  D +++ +KPMNC  H+ ++   L+SYR+L
Sbjct: 299 ILKTELWQRSGHYENYRENMYF------TTVDEQSYGVKPMNCLAHMMIYRSQLRSYRDL 352

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R  E G+V+R+E +G LHGL+RVRGFTQDDAH+ CT +Q+  E   +   +  +   F
Sbjct: 353 PLRYFELGTVHRHERAGVLHGLLRVRGFTQDDAHILCTPDQLDAEIKGVIQFVTEVMGIF 412

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD-RINTGVLLGEGAFYGP 477
           GFE  M +LSTRPEK +GSD  W+ A +    +L+ +K+S +   IN G    +GAFYGP
Sbjct: 413 GFEFEM-ELSTRPEKSIGSDDAWELATS---ALLNALKDSGRPYEINEG----DGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  L+DA+ R WQC TIQ DF LP RF+  YV++  EK  PVM+HR + G+IERFIG+
Sbjct: 465 KIDIKLRDALDRRWQCATIQCDFTLPERFDLTYVDADGEKKRPVMVHRVILGAIERFIGV 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE+F GN P WL+P+QA + T+T + + YAQ   + L++  + ++ DFRNE + +KIRE
Sbjct: 525 LIEHFAGNFPTWLAPVQATIVTVTDNQIPYAQAAFDKLRAAGIRVQKDFRNEKLGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIR 622
             ++KIP +++ GDKE     +  R
Sbjct: 585 AQLQKIPYMLVVGDKEVESGMLAPR 609


>gi|225864350|ref|YP_002749728.1| threonyl-tRNA synthetase [Bacillus cereus 03BB102]
 gi|225785860|gb|ACO26077.1| threonine--tRNA ligase [Bacillus cereus 03BB102]
          Length = 639

 Score =  580 bits (1495), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 281/633 (44%), Positives = 435/633 (68%), Gaps = 17/633 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N ++ DL   + E + +EIIT
Sbjct: 6   IEIKFPDGSVKEFVKGITLEEIAGSISSSLKKKAVAGKVNDELYDLRRNIEENAEVEIIT 65

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +    + + RHS AHI+A+AV+ ++ ++ + +GP+IE+GFYYD D     + ++L +IE
Sbjct: 66  IDSNEGVEIARHSAAHILAQAVKRLYGDINLGVGPVIENGFYYDMDFPSSVNVEDLRKIE 125

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M++II  +    +  +S E+A +LF+   +  K+E+LE+IP+ E+VTLY+QGE+ DLC
Sbjct: 126 KEMKKIINENIKIERVEVSREEAAKLFQEMNDRLKLELLEAIPSGESVTLYKQGEFVDLC 185

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG +K  F+L  V+GAYWRGDSN  +L RIYG A+++Q+EL +YL+F+EE+ K
Sbjct: 186 RGPHLPSTGYLKA-FQLTHVSGAYWRGDSNNQVLQRIYGVAFSSQKELEEYLHFVEEAAK 244

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           R+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R   K+ +Y+E+ TP +++Q
Sbjct: 245 RNHRKLGNELELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQ 304

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            +W++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R+
Sbjct: 305 EVWERSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIRM 358

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG V+R+E SG+L+GL+RVR F QDDAH+F T EQ+ +E   +   I  +YK FGFE 
Sbjct: 359 CEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPEQIEDEIKSVMAQIDYVYKTFGFE- 417

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +G D LW+ AE  ++ VL ++  + + R+N     G+GAFYGPK ++ 
Sbjct: 418 YEVELSTRPEDSMGDDKLWEQAEASLENVLQSL--NYKYRLNE----GDGAFYGPKIDFH 471

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+ R  QCGTIQ+DF +P +F+  Y++  +EK  PV+IHRAV GS++RF+ I+IE+F
Sbjct: 472 IKDALNRSHQCGTIQLDFQMPEKFDLNYIDEKNEKRRPVVIHRAVLGSLDRFLAILIEHF 531

Query: 543 KGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            G  P W++P+Q  V  ++++  V+YA E+A+ L    + +E D R+E + YKIRE  ++
Sbjct: 532 GGAFPAWVAPVQVKVIPVSNAVHVQYADEVADKLAQAGVRVERDMRDEKLGYKIREAQMQ 591

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           K+P +++ GDKE    ++ +R++G   +  + L
Sbjct: 592 KVPYVLVIGDKEMENGAVNVRKYGEEKSDVIEL 624


>gi|269119235|ref|YP_003307412.1| threonyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
 gi|268613113|gb|ACZ07481.1| threonyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
          Length = 634

 Score =  580 bits (1495), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 290/644 (45%), Positives = 424/644 (65%), Gaps = 18/644 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I++  PD SI+      +  + A+SI  SL K  V   ++    D S  + +   +E+IT
Sbjct: 2   IEIILPDSSIRTLENPVSVLEFAKSIGSSLGKATVGALVDNVQVDASYILDKSAKVELIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +  +   ++RHS AHIMA+AVQ ++P  +V IGP+IE+GF+YDFD E PF+ D+LA+IE
Sbjct: 62  IDSEKGTEILRHSAAHIMAQAVQRLFPGTKVTIGPVIENGFFYDFDPENPFTEDDLAKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M++II  +  F +  +S   A+++F   KE YK+EI++ +  +E V++Y  GE+ DLC
Sbjct: 122 NEMKKIIKENYKFERTEMSAADAKKMFLDMKEDYKIEIIDDL-GEEKVSIYTIGEFKDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RG H+ STG +K F KLM  AGAYWRGDSN+ ML RIYG A++ ++EL  YL  +EE+EK
Sbjct: 181 RGTHLPSTGYLKAF-KLMSTAGAYWRGDSNKKMLQRIYGVAFSAKKELDDYLIMMEEAEK 239

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL ++++LF + E G G  F+  KG ++   L    RR+ K   Y+EI TP +LD+
Sbjct: 240 RDHRKLGKQLNLFFLDEHGPGFPFFMPKGMEVINKLQEIWRREHKKAGYKEIKTPVMLDK 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW +YR NM+  +       D + +A+KPMNCPG +  + + L SY+  P++ 
Sbjct: 300 ELWEISGHWFNYRENMYTSEI------DEKEYAIKPMNCPGAILAYKNNLHSYKNFPLKY 353

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            E G V+R+E SG+LHGLMRVR FTQDDAHVFCT++Q+ ++ ++I NL    YK FGFE 
Sbjct: 354 GEMGLVHRHEFSGALHGLMRVRAFTQDDAHVFCTEDQIEDQIMEIINLYDRFYKLFGFE- 412

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             ++LST+P+K +GSD +WD AE  +   L  +K     ++N G    +GAFYGPK ++ 
Sbjct: 413 YNIELSTKPDKAIGSDEIWDIAERDLTNAL--VKMGIDYKLNPG----DGAFYGPKIDFK 466

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KD+IGR WQCGTIQ+DFNLP RF+  Y+    EK  PVMIHRA++GSIERF+GI+IE++
Sbjct: 467 MKDSIGRIWQCGTIQLDFNLPLRFHMSYIGPDGEKHQPVMIHRAMYGSIERFMGILIEHY 526

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE-HSIK 601
            G  P+WL+P+Q  + TI+    EYA ++   L++  +  E D R+E I YKIRE ++ +
Sbjct: 527 AGAFPIWLAPVQVSILTISGEQAEYASDLFKKLQNIGIRTELDIRDEKIGYKIREANAEQ 586

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           KIPI +I G  E +   + IRRFGS  +  +   D + ++ +ES
Sbjct: 587 KIPIQLIIGKNEVANNEVNIRRFGSQESNTMKAEDFLKLIEEES 630


>gi|313896316|ref|ZP_07829869.1| threonine--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430]
 gi|312975115|gb|EFR40577.1| threonine--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430]
          Length = 639

 Score =  580 bits (1494), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 289/644 (44%), Positives = 410/644 (63%), Gaps = 18/644 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDP-VREGSIEIIT 63
           +KLT PDGS++      T  DV + +S SLAKKA+A +++GK  DL  P  ++ + +++T
Sbjct: 2   VKLTLPDGSVREVEHGTTLLDVVKQMSNSLAKKALAASLDGKTVDLMTPATKDAAFQVLT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPE--VQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
            ED      +RH+C+HIMA+AV+ ++ +  VQ+AIGP IE+GFYYDFD E   +  +L  
Sbjct: 62  FEDAGGRLALRHTCSHIMAQAVKRLYKDAHVQLAIGPAIENGFYYDFDMEHRLTDADLRD 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK+M++I+  +    ++ +   +A   F  K E YKVE++E +P    ++ Y QGE+ D
Sbjct: 122 IEKEMKKIVKENLKLERREIPRSEAIAYFREKGENYKVELIEDLPEDVTISTYTQGEFTD 181

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LC GPHV STG+VK   +L  +AGAYWRG     ML RIYGTA+  Q+EL  YL+ LEE+
Sbjct: 182 LCAGPHVLSTGKVKAL-RLQSIAGAYWRGSEKNKMLQRIYGTAFEKQEELDAYLHMLEEA 240

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           EKRDHRKL RE+DLF + E+G G  F+H  G  +   L++Y R    +  Y EI+TP +L
Sbjct: 241 EKRDHRKLGRELDLFSLHEEGPGFPFFHPNGMILRNELLNYWREVHRRYGYSEISTPVIL 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            + LW+ SGHW  YR NM+  +       D   +A+KPMNCPG + V+   L SYR+LP+
Sbjct: 301 SRKLWETSGHWFHYRENMYTTQI------DEEDYAIKPMNCPGCMLVYRSQLHSYRDLPL 354

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLAE G V+R+E SG+LHGL RVR FTQDDAH+F T EQ+  E     +L   +Y+ FG 
Sbjct: 355 RLAELGLVHRHELSGALHGLFRVRNFTQDDAHLFVTPEQIEGEIQHTIDLFDEVYRTFGL 414

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
                +LSTRP+  +GSD +W+ A +   G+   ++N   D I   V  G+GAFYGPK +
Sbjct: 415 -SYKAELSTRPDDSMGSDEMWELATS---GLQKALENRGLDYI---VNEGDGAFYGPKID 467

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           + L+D+IGR WQCGTIQ+D +LP +F+  YV    EK  PVM+HR V+GSIERFIGI+IE
Sbjct: 468 FHLRDSIGRTWQCGTIQLDMSLPEKFDLTYVGEDGEKHRPVMLHRVVYGSIERFIGILIE 527

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           NF G  P+W++P+Q  +  IT    EYA+E+   +    + +E D RNE   YKIRE  +
Sbjct: 528 NFAGAFPVWMTPVQVRILPITERHAEYAEELRKRMFDRGIRVEVDNRNEKTGYKIRESQV 587

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KK P  ++ GD+E    ++ +R++G   +  +S  D I  + K+
Sbjct: 588 KKTPYTLVVGDQEQESGTVALRKYGEKDSTVMSADDFIAFVEKK 631


>gi|118477787|ref|YP_894938.1| threonyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|229184596|ref|ZP_04311798.1| Threonyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
 gi|118417012|gb|ABK85431.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Bacillus
           thuringiensis str. Al Hakam]
 gi|228598913|gb|EEK56531.1| Threonyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
          Length = 639

 Score =  580 bits (1494), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 281/633 (44%), Positives = 435/633 (68%), Gaps = 17/633 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N ++ DL   + E + +EIIT
Sbjct: 6   IEIKFPDGSVKEFVKGITLEEIAGSISSSLKKKAVAGKVNDELYDLRRNIEENAEVEIIT 65

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +    + + RHS AHI+A+AV+ ++ ++ + +GP+IE+GFYYD D     + ++L +IE
Sbjct: 66  IDSNEGVEIARHSAAHILAQAVKRLYGDINLGVGPVIENGFYYDMDFPSSVNVEDLRKIE 125

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M++II  +    +  +S E+A +LF+   +  K+E+LE+IP+ E+VTLY+QGE+ DLC
Sbjct: 126 KEMKKIINENIKIERVEVSREEAAKLFQEMNDRLKLELLEAIPSGESVTLYKQGEFVDLC 185

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG +K  F+L  V+GAYWRGDSN  +L RIYG A+++Q+EL +YL+F+EE+ K
Sbjct: 186 RGPHLPSTGYLKA-FQLTHVSGAYWRGDSNNQVLQRIYGVAFSSQKELEEYLHFVEEAAK 244

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           R+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R   K+ +Y+E+ TP +++Q
Sbjct: 245 RNHRKLGNELELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQ 304

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            +W++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R+
Sbjct: 305 EVWERSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIRM 358

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG V+R+E SG+L+GL+RVR F QDDAH+F T EQ+ +E   +   I  +YK FGFE 
Sbjct: 359 CEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPEQIEDEIKSVMAQIDYVYKTFGFE- 417

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +G D LW+ AE  ++ VL ++  + + R+N     G+GAFYGPK ++ 
Sbjct: 418 YEVELSTRPEDSMGDDKLWEQAEASLENVLQSL--NYKYRLNE----GDGAFYGPKIDFH 471

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+ R  QCGTIQ+DF +P +F+  Y++  +EK  PV+IHRAV GS++RF+ I+IE+F
Sbjct: 472 IKDALNRSHQCGTIQLDFQMPEKFDLNYIDEKNEKKRPVVIHRAVLGSLDRFLAILIEHF 531

Query: 543 KGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            G  P W++P+Q  V  ++++  V+YA E+A+ L    + +E D R+E + YKIRE  ++
Sbjct: 532 GGAFPAWVAPVQVKVIPVSNAVHVQYADEVADKLAQAGVRVERDMRDEKLGYKIREAQMQ 591

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           K+P +++ GDKE    ++ +R++G   +  + L
Sbjct: 592 KVPYVLVIGDKEMENGAVNVRKYGEEKSGVIEL 624


>gi|262038762|ref|ZP_06012119.1| threonine--tRNA ligase [Leptotrichia goodfellowii F0264]
 gi|261747220|gb|EEY34702.1| threonine--tRNA ligase [Leptotrichia goodfellowii F0264]
          Length = 636

 Score =  580 bits (1494), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 294/647 (45%), Positives = 436/647 (67%), Gaps = 18/647 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +++  PDG+++      T ++ A++IS SL K+ +   I+G   D S  + + GSI+IIT
Sbjct: 2   LEMLLPDGNVRKIEQPMTVTEFAKTISLSLGKETIGAIIDGVQVDPSHIIEKSGSIKIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
                 +A+IRHS AHIMA+AVQ ++P  +V IGP+IE+GF+YDFD E+PF+ ++L +IE
Sbjct: 62  STSEEGVAIIRHSAAHIMAQAVQKLFPGTKVTIGPVIENGFFYDFDPEKPFTEEDLTKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           ++M++I+  +  F +  +S E A++LF    E YKVEI++ +   + V++Y+QGE+ DLC
Sbjct: 122 EEMKKIVKENYEFKRSEMSAEDAKKLFAEMGENYKVEIIDDLGV-DKVSIYQQGEFVDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RG H+ STG +K F KLM  AGAYWRG+S+  ML RIYG A+ +++EL  YL  LEE+E+
Sbjct: 181 RGTHIPSTGYLKAF-KLMSTAGAYWRGNSDNKMLQRIYGVAFGSKKELEDYLTMLEEAER 239

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL ++MDLF + E G G  F+  KG ++   L    R++ K   YEEI TP +LD+
Sbjct: 240 RDHRKLGKQMDLFFLDEHGPGFPFFMPKGMELMNKLQEIWRKEHKKRKYEEIRTPVMLDK 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW +YR NM+  +       D + +A+KPMNCPG +  + + L SY++LP++ 
Sbjct: 300 ELWEISGHWFNYRENMYTSEI------DEKVYAIKPMNCPGSIIAYKNNLHSYKDLPLKY 353

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            E G V+R+E SG+LHGLMRVR FTQDDAHVFCTKEQ+  + ++I +L    Y  FGF+ 
Sbjct: 354 GEMGLVHRHEFSGALHGLMRVRAFTQDDAHVFCTKEQIEEQIIEIIDLYDKFYTLFGFD- 412

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             ++LST+PEK +GSD +W  AE  +   L+  K   + ++N G    +GAFYGPK ++ 
Sbjct: 413 YNIELSTKPEKAIGSDEIWAVAEADLASALE--KKGIKYKLNPG----DGAFYGPKIDFK 466

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           ++D+IGR WQCGTIQ+DFNLP+RF   Y+ +  EK  PVMIHRA++GS+ERFIGI+IE++
Sbjct: 467 MRDSIGRIWQCGTIQLDFNLPARFEMSYIGADGEKHEPVMIHRAMYGSMERFIGILIEHY 526

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE-HSIK 601
            G  P WL+P+QA + TI+   V +A+++   L+   + ++ D R+E I YKIRE +  +
Sbjct: 527 AGAFPTWLAPVQARILTISKEQVPFAEKLYEELQEAGIRVDIDTRDEKIGYKIREANGDQ 586

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
           KIP+ +I G  E     + +RRFGS  +Q VS+ + + +L +ES  P
Sbjct: 587 KIPVQLIIGKNEVENNEVNVRRFGSQDSQNVSVKEIVDMLLEESKVP 633


>gi|196040031|ref|ZP_03107334.1| threonine--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|196029290|gb|EDX67894.1| threonine--tRNA ligase [Bacillus cereus NVH0597-99]
          Length = 639

 Score =  580 bits (1494), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 281/633 (44%), Positives = 435/633 (68%), Gaps = 17/633 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N ++ DL   + E + +EIIT
Sbjct: 6   IEIKFPDGSVKEFVKGITLEEIAGSISSSLKKKAVAGKVNDELYDLRRNIEENAEVEIIT 65

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +    + + RHS AHI+A+AV+ ++ ++ + +GP+IE+GFYYD D     + ++L +IE
Sbjct: 66  IDSNEGVEIARHSAAHILAQAVKRLYGDINLGVGPVIENGFYYDMDLPSSVNVEDLRKIE 125

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M++II  +    +  +S E+A +LF+   +  K+E+LE+IP+ E+VTLY+QGE+ DLC
Sbjct: 126 KEMKKIINENIKIERVEVSREEAAKLFQEMNDRLKLELLEAIPSGESVTLYKQGEFVDLC 185

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG +K  F+L  V+GAYWRGDSN  +L RIYG A+++Q+EL +YL+F+EE+ K
Sbjct: 186 RGPHLPSTGYLKA-FQLTHVSGAYWRGDSNNQVLQRIYGVAFSSQKELEEYLHFVEEAAK 244

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           R+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R   K+ +Y+E+ TP +++Q
Sbjct: 245 RNHRKLGNELELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQ 304

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            +W++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R+
Sbjct: 305 EVWERSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIRM 358

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG V+R+E SG+L+GL+RVR F QDDAH+F T EQ+ +E   +   I  +YK FGF K
Sbjct: 359 CEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPEQIEDEIKSVMAQIDYVYKTFGF-K 417

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +G D LW+ AE  ++ VL ++  + + R+N     G+GAFYGPK ++ 
Sbjct: 418 YEVELSTRPEDSMGDDKLWEQAEASLENVLQSL--NYKYRLNE----GDGAFYGPKIDFH 471

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+ R  QCGTIQ+DF +P +F+  Y++  +EK  PV+IHRAV GS++RF+ I+IE+F
Sbjct: 472 IKDALNRSHQCGTIQLDFQMPEKFDLNYIDEKNEKKRPVVIHRAVLGSLDRFLAILIEHF 531

Query: 543 KGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            G  P W++P+Q  V  ++++  V+YA E+A+ L    + +E D R+E + YKIRE  ++
Sbjct: 532 GGAFPAWVAPVQVKVIPVSNAVHVQYADEVADKLAQAGVRVERDMRDEKLGYKIREAQMQ 591

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           K+P +++ GDKE    ++ +R++G   +  + L
Sbjct: 592 KVPYVLVIGDKEMENGAVNVRKYGEEKSGVIEL 624


>gi|229173066|ref|ZP_04300617.1| Threonyl-tRNA synthetase [Bacillus cereus MM3]
 gi|228610399|gb|EEK67670.1| Threonyl-tRNA synthetase [Bacillus cereus MM3]
          Length = 639

 Score =  579 bits (1493), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 283/633 (44%), Positives = 432/633 (68%), Gaps = 17/633 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N ++ DL   + E + +EI+T
Sbjct: 6   IEMKFPDGSVKEFVKGITLEEIAGSISSSLKKKAVAGKVNDQLYDLRRNIEENAEVEIVT 65

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +    + + RHS AHI+A+AV+ +   V + +GP+IE+GFYYD D     + ++L +IE
Sbjct: 66  IDSNEGVEIARHSAAHILAQAVKRMHGNVNLGVGPVIENGFYYDMDLPSSVNVEDLPEIE 125

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M++II  +    +  +S E+A++LF+   +  K+ +LE+IP+ E+VTLY+QGE+ DLC
Sbjct: 126 KEMKKIINENIKIERVEVSREEAKKLFQEMNDHLKLALLEAIPSGESVTLYKQGEFVDLC 185

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG +K  F+L  V+GAYWRGDSN  +L RIYG A+++Q+EL  YL+F+EE+ K
Sbjct: 186 RGPHLPSTGYLKA-FQLTHVSGAYWRGDSNNQVLQRIYGVAFSSQKELEDYLHFVEEAAK 244

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           R+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R   K+  Y+E+ TP +++Q
Sbjct: 245 RNHRKLGSELELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYKYQEVRTPFMMNQ 304

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R+
Sbjct: 305 ELWEKSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIRM 358

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG V+R+E SG+L+GL+RVR F QDDAH+F T EQ+ +E   +   I  +YK FGFE 
Sbjct: 359 CEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPEQIEDEIKSVMAQIDYVYKTFGFE- 417

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +G D LW+ AE  ++ VL ++  + + R+N     G+GAFYGPK ++ 
Sbjct: 418 YEVELSTRPEDSMGDDKLWEQAEEALENVLHSL--NYKYRLNE----GDGAFYGPKIDFH 471

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+ R  QCGTIQ+DF +P +F+  Y++  +EK  PV+IHRAV GS++RF+ I+IE+F
Sbjct: 472 IKDALNRSHQCGTIQLDFQMPEKFDLNYIDEKNEKRRPVVIHRAVLGSLDRFLAILIEHF 531

Query: 543 KGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            G  P W++P+Q  V  ++++  V+YA EIA+ L    + +E D R+E + YKIRE  ++
Sbjct: 532 GGAFPAWVAPVQVKVIPVSNAVHVQYADEIADKLAQAGIRVERDVRDEKLGYKIREAQMQ 591

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           K+P +++ GDKE    S+ +R++G   ++ + L
Sbjct: 592 KVPYVLVIGDKEMENGSVNVRKYGEDQSEVIEL 624


>gi|196033851|ref|ZP_03101262.1| threonyl-tRNA synthetase [Bacillus cereus W]
 gi|228945992|ref|ZP_04108333.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|195993531|gb|EDX57488.1| threonyl-tRNA synthetase [Bacillus cereus W]
 gi|228813685|gb|EEM59965.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
          Length = 639

 Score =  579 bits (1493), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 281/633 (44%), Positives = 435/633 (68%), Gaps = 17/633 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N ++ DL   + E + +EIIT
Sbjct: 6   IEIKFPDGSVKEFVKGITLEEIAGSISNSLKKKAVAGKVNDELYDLRRIIEENAEVEIIT 65

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +    + + RHS AHI+A+AV+ ++ ++ + +GP+IE+GFYYD D     + ++L +IE
Sbjct: 66  IDSNEGVEIARHSAAHILAQAVKRLYGDINLGVGPVIENGFYYDMDLPSSVNVEDLRKIE 125

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M++II  +    +  +S E+A +LF+   +  K+E+LE+IP+ E+VTLY+QGE+ DLC
Sbjct: 126 KEMKKIINENIKVERVEVSREEAAKLFQEMNDRLKLELLEAIPSGESVTLYKQGEFVDLC 185

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG +K  F+L  V+GAYWRGDSN  +L RIYG A+++Q+EL +YL+F+EE+ K
Sbjct: 186 RGPHLPSTGYLKA-FQLTHVSGAYWRGDSNNQVLQRIYGVAFSSQKELEEYLHFVEEAAK 244

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           R+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R   K+ +Y+E+ TP +++Q
Sbjct: 245 RNHRKLGNELELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQ 304

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            +W++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R+
Sbjct: 305 EVWERSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIRM 358

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG V+R+E SG+L+GL+RVR F QDDAH+F T EQ+ +E   +   I  +YK FGFE 
Sbjct: 359 CEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPEQIEDEIKSVMAQIDYVYKTFGFE- 417

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +G D LW+ AE  ++ VL ++  + + R+N     G+GAFYGPK ++ 
Sbjct: 418 YEVELSTRPEDSMGDDKLWEQAEASLENVLQSL--NYKYRLNE----GDGAFYGPKIDFH 471

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+ R  QCGTIQ+DF +P +F+  Y++  +EK  PV+IHRAV GS++RF+ I+IE+F
Sbjct: 472 IKDALNRSHQCGTIQLDFQMPEKFDLNYIDEKNEKKRPVVIHRAVLGSLDRFLAILIEHF 531

Query: 543 KGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            G  P W++P+Q  V  ++++  V+YA E+A+ L    + +E D R+E + YKIRE  ++
Sbjct: 532 GGAFPAWVAPVQVKVIPVSNAVHVQYADEVADKLTQAGVRVERDMRDEKLGYKIREAQMQ 591

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           K+P +++ GDKE    ++ +R++G   +  + L
Sbjct: 592 KVPYVVVIGDKEMENGAVNVRKYGEEKSGVIEL 624


>gi|310640050|ref|YP_003944808.1| ser-tRNA(thr) hydrolase / threonyl-tRNA synthetase [Paenibacillus
           polymyxa SC2]
 gi|309245000|gb|ADO54567.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Paenibacillus
           polymyxa SC2]
          Length = 637

 Score =  579 bits (1493), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 283/644 (43%), Positives = 423/644 (65%), Gaps = 18/644 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           I++  PDG+++ +    T +DVA SIS  L K AVA  +NGK  DL+  + E   +EIIT
Sbjct: 3   IQVKLPDGAVREYEQGVTIADVAGSISSGLKKNAVAGKVNGKAVDLNTVLDENVDLEIIT 62

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPE--VQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
            +    L + RHS AH++A+A++ I+ E  V++ IGP+I+ GFYYD D E P S D+LA+
Sbjct: 63  LDGADGLEIYRHSTAHLLAQALKRIYGEKNVKLGIGPVIDSGFYYDIDIENPLSVDDLAK 122

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK+M +I   + P  ++ +S E+A  +F   ++  K+E++  +P +  +T+Y QGE+FD
Sbjct: 123 IEKEMAKITQENLPITRRVVSREEATRIFGEMEDPLKLELIRDLPEEAEITIYDQGEFFD 182

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ STG++K F KL+ VAGAYWRGDSN  ML RIYGTA+  + +L ++L+ LEE+
Sbjct: 183 LCRGPHLPSTGRIKAF-KLLSVAGAYWRGDSNNKMLQRIYGTAFPKKAQLDEHLHLLEEA 241

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVL 300
           +KRDHRKL +E++LF  +E+  G+ F+  KG  +   L  Y R   +   YEE+ TP ++
Sbjct: 242 KKRDHRKLGKELELFMFSEEAPGMPFYLPKGMVVRTALEDYSRDIQRLHGYEEVRTPLMM 301

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  LW+QSGH++ Y+ NM+  +       D  TFALKPMNCPGH+ VF + L SYR+LP+
Sbjct: 302 NNRLWEQSGHYEHYKENMYFSEV------DETTFALKPMNCPGHMLVFKNELHSYRDLPI 355

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R++EFG V+R+E SG+L+G+MRVR F QDDAH+F T  Q+  E   +  LI  +Y  FGF
Sbjct: 356 RISEFGQVHRHELSGALNGMMRVRTFCQDDAHIFVTPGQIEKEITDVIKLINEMYSVFGF 415

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           +   V+LSTRP+  +G  ALWD AE  ++ VLD +       IN  +  G+GAFYGPK +
Sbjct: 416 D-FTVELSTRPDDFMGEPALWDQAEQALQNVLDHLG------INYRINAGDGAFYGPKID 468

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           + + DA+ R WQCGTIQ+DF +P +F+  YV   ++K  PV+IHRA++GSI+RF+GI+ E
Sbjct: 469 FHILDALKRSWQCGTIQLDFQMPEKFDLTYVGEDNQKHRPVVIHRAIYGSIDRFMGILTE 528

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +F G  PLWL+P+ A +  ++ + +E A E+   L    L +E D RNE + YKIRE  +
Sbjct: 529 HFTGAFPLWLAPVHAKLLPVSENYIETANEVQEALLKAGLRVEVDTRNEKLGYKIREAQL 588

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +K+P + + G+ E +  ++ +R+ G       S+ D +  ++ E
Sbjct: 589 EKVPYMFVIGENEKTTGTVAVRKRGEGDLGSFSIADIVEKISTE 632


>gi|302874879|ref|YP_003843512.1| threonyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|307690504|ref|ZP_07632950.1| threonyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|302577736|gb|ADL51748.1| threonyl-tRNA synthetase [Clostridium cellulovorans 743B]
          Length = 635

 Score =  579 bits (1493), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 302/620 (48%), Positives = 414/620 (66%), Gaps = 16/620 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K++  DGSI          +VA+ +S SLAK A+A  I+G+V DL   + ++ S+EI+T
Sbjct: 2   LKVSLKDGSIVEVEEGKKIIEVAKQLSSSLAKAALAGRIDGEVKDLMTEINKDCSLEILT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D    + +RH+ +HI+A+AV+ ++P V++AIGP IE+GFYYDFD + P + + L +IE
Sbjct: 62  FDDEEGRSTLRHTASHILAQAVKRLYPNVKLAIGPSIENGFYYDFDADFPITPELLEKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M +II  +    K  L  E+A +  E K+E YKV+++E +P    ++ Y QGE+ DLC
Sbjct: 122 KEMNKIIKENLKLEKFELPREEAIKYMEEKQELYKVKLIEDLPLDAVISFYTQGEFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPHV  TG VK   KL  VAGAYWRGD N   L RIYGTA+  +Q+L  YL  LEE++K
Sbjct: 182 AGPHVIGTGMVKAV-KLTSVAGAYWRGDVNNKSLQRIYGTAFTKKQDLDDYLNMLEEAKK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           RDHRKL +E++LF + E+G G  F+  KG  +  +L  Y R    K  Y+EI TP +L +
Sbjct: 241 RDHRKLGKELELFTLLEEGPGFPFFLPKGMIVRNSLEDYWRVIHKKAGYQEIKTPIILSE 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW QSGHWD Y+ NM+          D + FA+KPMNCPG +  + + L SYRELP+RL
Sbjct: 301 ELWHQSGHWDHYKENMYFTSI------DEKPFAVKPMNCPGSILAYKNALHSYRELPLRL 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AE G V+R+E SG+LHGLMRVR FTQDDAH+F TK+Q+ +E L +  LI   YK+FGFE 
Sbjct: 355 AELGLVHRHELSGALHGLMRVRCFTQDDAHIFMTKDQITDELLDLIKLIDDFYKNFGFE- 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +GSD  W+ A N ++  LD  K     +IN G    +GAFYGPK ++ 
Sbjct: 414 YFVELSTRPENSMGSDEDWELATNGLRTALD--KAGLSYKINEG----DGAFYGPKIDFH 467

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+D+IGR WQCGTIQ+DF LP RF+  Y+    EK  PVM+HR VFGSIERFIGI+IE+F
Sbjct: 468 LRDSIGRTWQCGTIQLDFQLPERFDIDYIGPDGEKHRPVMVHRVVFGSIERFIGILIEHF 527

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P+Q  V  IT S+  Y +EIA +L+   + +E+D RNE I YKIRE  ++K
Sbjct: 528 AGAFPAWLAPVQVKVMNITDSSKGYVEEIARVLEEKGIRVESDLRNEKIGYKIREAQLQK 587

Query: 603 IPIIIICGDKEASERSIGIR 622
           IP +I+ G+KE +E++I +R
Sbjct: 588 IPYMIVIGEKEMNEKTIAVR 607


>gi|229011636|ref|ZP_04168819.1| Threonyl-tRNA synthetase [Bacillus mycoides DSM 2048]
 gi|228749594|gb|EEL99436.1| Threonyl-tRNA synthetase [Bacillus mycoides DSM 2048]
          Length = 639

 Score =  579 bits (1493), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 286/645 (44%), Positives = 437/645 (67%), Gaps = 18/645 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           I++ FPDGS+K F    T  ++A +IS SL KKAVA  +N +  DL   + E + +EIIT
Sbjct: 6   IEIKFPDGSVKEFVKGITLEEIAGAISSSLKKKAVAGKVNDQSFDLRRNIEESAKVEIIT 65

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +    + + RHS AHI+A+AV+ I+ +V + +GP+IE+GFYYD D     + ++L +IE
Sbjct: 66  MDSDEGVKIARHSAAHILAQAVKRIYGDVNLGVGPVIENGFYYDMDLPSSVNVEDLPKIE 125

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M+ II  +    +  +S E+A+ELF+   ++ K+E+LE+IP  E+VTLY+QGE+ DLC
Sbjct: 126 KEMKNIINENVKIERVEVSREEAKELFQEMNDSLKLELLEAIPNGESVTLYKQGEFVDLC 185

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG +K  F+L  V+GAYWRGDSN  +L RIYG A+++QQ+L +YL+F+EE+ K
Sbjct: 186 RGPHLPSTGYLKA-FQLTHVSGAYWRGDSNNQVLQRIYGVAFSSQQKLEEYLHFVEEAAK 244

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           R+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R    + +Y+E+ TP +++Q
Sbjct: 245 RNHRKLGSELELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQNEYNYQEVRTPFMMNQ 304

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R+
Sbjct: 305 ELWEKSGHWGHYKDNMYFSEV------DHKSFALKPMNCPGHMLMFKNKLHSYRELPIRM 358

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG V+R+E SG+L+GL+RVR F QDDAH+F T EQ+ +E   +   I  +YK FGFE 
Sbjct: 359 CEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPEQIEDEIKSVLAQIDYVYKTFGFE- 417

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +G D LW+ AE  ++ VL ++  + + R+N     G+GAFYGPK ++ 
Sbjct: 418 YEVELSTRPEDSMGDDKLWEQAELALENVLQSL--NYKYRLNE----GDGAFYGPKIDFH 471

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+ R  QCGT+Q+DF +P +F+  Y++ ++EK  PV+IHRAV GS++RF+ I+IE+F
Sbjct: 472 IKDALNRSHQCGTVQLDFQMPEKFDLNYIDENNEKRRPVVIHRAVLGSLDRFLAILIEHF 531

Query: 543 KGNLPLWLSPIQAIVTTITSSAVE-YAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            G  P W++P+Q  V  ++++  E Y   IA+ L    + +E D R+E + YKIRE  ++
Sbjct: 532 GGAFPAWVAPVQVKVIPVSNAVHEQYINRIADKLAQAGIRVERDIRDEKLGYKIREAQMQ 591

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           K+P +++ GDKE    ++ +R++G   ++ V  LDA     KE +
Sbjct: 592 KVPYVLVIGDKEMESEAVNVRKYGEEKSEVVE-LDAFVESMKEEI 635


>gi|229044114|ref|ZP_04191800.1| Threonyl-tRNA synthetase [Bacillus cereus AH676]
 gi|229109806|ref|ZP_04239391.1| Threonyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|228673651|gb|EEL28910.1| Threonyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|228725227|gb|EEL76498.1| Threonyl-tRNA synthetase [Bacillus cereus AH676]
          Length = 640

 Score =  579 bits (1493), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 282/633 (44%), Positives = 435/633 (68%), Gaps = 17/633 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N  + DL   + E + +EIIT
Sbjct: 6   IEIKFPDGSVKEFVKGITLEEIAGSISSSLKKKAVAGKVNDGLYDLRRNIEENAEVEIIT 65

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +    + + RHS AHI+A+AV+ ++ ++ + +GP+IE+GFYYD D     + ++L +IE
Sbjct: 66  IDSNEGVEITRHSAAHILAQAVKRMYGDINLGVGPVIENGFYYDMDLPSSVNVEDLRKIE 125

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M++II  +    +  +S E+A +LF+   +  K+E+LE+IP+ E+VTLY+QGE+ DLC
Sbjct: 126 KEMKKIINENIKIERVEVSREEAAKLFQEMNDRLKLELLEAIPSGESVTLYKQGEFVDLC 185

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG +K  F+L  V+GAYWRGDSN  +L RIYG A+++Q+EL +YL+F+EE+ K
Sbjct: 186 RGPHLPSTGYLKA-FQLTHVSGAYWRGDSNNQVLQRIYGVAFSSQKELEEYLHFVEEATK 244

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           R+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R   K+ +Y+E+ TP +++Q
Sbjct: 245 RNHRKLGNELELFMFSEEAPGMPFYLPKGQMIRNELEAFLREIQKEYNYQEVRTPFMMNQ 304

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            +W++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R+
Sbjct: 305 EVWERSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIRM 358

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG V+R+E SG+L+GL+RVR F QDDAH+F T +Q+ NE   +   I  +YK FGFE 
Sbjct: 359 CEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPKQIENEIKSVMAQIDYVYKTFGFE- 417

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +G D LW+ AE  ++ VL ++  + + R+N     G+GAFYGPK ++ 
Sbjct: 418 YEVELSTRPEDSMGDDKLWEQAEAALENVLQSL--NYKYRLNE----GDGAFYGPKIDFH 471

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+ R  QCGTIQ+DF +P +F+  Y++ ++EK  PV+IHRAV GS++RF+ I+IE+F
Sbjct: 472 IKDALNRSHQCGTIQLDFQMPEKFDLNYIDENNEKKRPVVIHRAVLGSLDRFLAILIEHF 531

Query: 543 KGNLPLWLSPIQAIVTTITSSAVE-YAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            G  P W++P+Q  V  ++++  E YA EIA  L    + +E D R+E + YKIRE  ++
Sbjct: 532 GGAFPAWVAPVQVKVIPVSNAVHEQYANEIALKLAQAGVRVEQDARDEKLGYKIREAQMQ 591

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           K+P +++ GDKE    ++ +R++G   ++ ++L
Sbjct: 592 KVPYVLVIGDKEMENGAVNVRKYGEEKSEVIAL 624


>gi|296502926|ref|YP_003664626.1| threonyl-tRNA synthetase [Bacillus thuringiensis BMB171]
 gi|296323978|gb|ADH06906.1| threonyl-tRNA synthetase [Bacillus thuringiensis BMB171]
          Length = 640

 Score =  579 bits (1492), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 282/633 (44%), Positives = 435/633 (68%), Gaps = 17/633 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N  + DL   + E + +EIIT
Sbjct: 6   IEIKFPDGSVKEFVKGITLEEIAGSISSSLKKKAVAGKVNDGLYDLRRNIEENAEVEIIT 65

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +    + + RHS AHI+A+AV+ ++ ++ + +GP+IE+GFYYD D     + ++L +IE
Sbjct: 66  IDSNEGVEITRHSAAHILAQAVKRMYGDINLGVGPVIENGFYYDMDLPSSVNVEDLRKIE 125

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M++II  +    +  +S E+A +LF+   +  K+E+LE+IP+ E+VTLY+QGE+ DLC
Sbjct: 126 KEMKKIINENIKIERVEVSREEAAKLFQEMNDRLKLELLEAIPSGESVTLYKQGEFVDLC 185

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG +K  F+L  V+GAYWRGDSN  +L RIYG A+++Q+EL +YL+F+EE+ K
Sbjct: 186 RGPHLPSTGYLKA-FQLTHVSGAYWRGDSNNQVLQRIYGVAFSSQKELEEYLHFVEEAAK 244

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           R+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R   K+ +Y+E+ TP +++Q
Sbjct: 245 RNHRKLGSELELFMFSEEAPGMPFYLPKGQMIRNELEAFLREIQKEYNYQEVRTPFMMNQ 304

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            +W++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R+
Sbjct: 305 EVWERSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIRM 358

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG V+R+E SG+L+GL+RVR F QDDAH+F T +Q+ NE   +   I  +YK FGFE 
Sbjct: 359 CEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPKQIENEIKSVMAQIDYVYKTFGFE- 417

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +G D LW+ AE  ++ VL ++  + + R+N     G+GAFYGPK ++ 
Sbjct: 418 YEVELSTRPEDSMGDDKLWEQAEAALENVLQSL--NYKYRLNE----GDGAFYGPKIDFH 471

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+ R  QCGTIQ+DF +P +F+  Y++ ++EK  PV+IHRAV GS++RF+ I+IE+F
Sbjct: 472 IKDALNRSHQCGTIQLDFQMPEKFDLNYIDENNEKKRPVVIHRAVLGSLDRFLAILIEHF 531

Query: 543 KGNLPLWLSPIQAIVTTITSSAVE-YAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            G  P W++P+Q  V  ++++  E YA EIA  L    + +E D R+E + YKIRE  ++
Sbjct: 532 GGAFPAWVAPVQVKVIPVSNAVHEQYANEIALKLAQAGVRVEQDARDEKLGYKIREAQMQ 591

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           K+P +++ GDKE    ++ +R++G   ++ ++L
Sbjct: 592 KVPYVLVIGDKEMENGAVNVRKYGEEKSEVIAL 624


>gi|229096864|ref|ZP_04227833.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-29]
 gi|228686474|gb|EEL40383.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-29]
          Length = 639

 Score =  579 bits (1492), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 282/633 (44%), Positives = 434/633 (68%), Gaps = 17/633 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           I++ FPDGS+K F    T  ++A SIS SL +KAVA  +N ++ DL   + E + +EIIT
Sbjct: 6   IEIKFPDGSVKEFVKGITLEEIAGSISSSLKRKAVAGKVNDQLYDLRRNIEENAEVEIIT 65

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +    + + RHS AHI+A+AV+ ++ ++ + +GP+IE+GFYYD D     + ++L +IE
Sbjct: 66  IDSNDGVEIARHSAAHILAQAVKRLYGDINLGVGPVIENGFYYDMDLPSSVNVEDLPKIE 125

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M+ II  +    +  +S E+A +LF+   +  K+E+LE+IP+ E+VTLY+QGE+ DLC
Sbjct: 126 KEMRNIIKENISIERVEVSREEAAKLFQEMNDRLKLELLEAIPSGESVTLYKQGEFVDLC 185

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV ST  +K  F+L  V+GAYWRGDSN  +L RIYG A+++Q+EL +YL+F+EE+ K
Sbjct: 186 RGPHVPSTSYLKA-FQLTHVSGAYWRGDSNNQVLQRIYGVAFSSQKELEEYLHFVEEAAK 244

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           R+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R   K+ +Y+E+ TP +++Q
Sbjct: 245 RNHRKLGNELELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQ 304

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            +W++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R+
Sbjct: 305 EVWERSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIRM 358

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG V+R+E SG+L+GL+RVR F QDDAH+F T EQ+ +E   +   I  +YK FGFE 
Sbjct: 359 CEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPEQIEDEIKSVMGQIDYVYKTFGFE- 417

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +G D LW+ AE  ++ VL ++  + + R+N     G+GAFYGPK ++ 
Sbjct: 418 YEVELSTRPEDSMGDDKLWEQAEAALENVLQSL--NYKYRLNE----GDGAFYGPKIDFH 471

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+ R  QCGTIQ+DF +P +F+  Y++  +EK  PV+IHRAV GS++RF+ I+IE+F
Sbjct: 472 IKDALNRSHQCGTIQLDFQMPEKFDLNYIDVKNEKKRPVVIHRAVLGSLDRFLAILIEHF 531

Query: 543 KGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            G  P W++P+Q  V  ++++  V+YA E+A+ L    + IE D R+E + YKIRE  ++
Sbjct: 532 GGAFPAWVAPVQVKVIPVSNAVHVQYANEVADKLAQAGVRIERDVRDEKLGYKIREAQMQ 591

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           KIP +++ GD+E     + +R++G   ++ V+L
Sbjct: 592 KIPYVLVIGDREMENGFVNVRKYGEEKSEVVAL 624


>gi|322419731|ref|YP_004198954.1| threonyl-tRNA synthetase [Geobacter sp. M18]
 gi|320126118|gb|ADW13678.1| threonyl-tRNA synthetase [Geobacter sp. M18]
          Length = 636

 Score =  579 bits (1492), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 283/616 (45%), Positives = 416/616 (67%), Gaps = 22/616 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEI 61
           ++IK+T PDGS +  P  A+  D+A SI   LAK A+A  I+G + DL+ P+ +G+ +EI
Sbjct: 2   NEIKVTLPDGSQRPLPAGASIFDLAASIGAGLAKAAIAGKIDGNLVDLNTPLFDGARVEI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +T + P +L +IRHS +H+MA+AV++++P+ +V IGP IE GFYYDFD + PF+ ++L +
Sbjct: 62  VTEKSPEALEIIRHSTSHLMAQAVKALFPQAKVTIGPAIETGFYYDFDVDHPFTPEDLEK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE+KM+E+   D    +  LS   A ELF    E YKVE+++ + A + V+LY QG++ D
Sbjct: 122 IEEKMRELAKADLKIERSELSSADAIELFRKMGEDYKVELIQDLGA-DKVSLYTQGDFSD 180

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+  T   K F KL  +AGAYWRGD  R ML R+YGTA+  ++EL  YL  +EE+
Sbjct: 181 LCRGPHLPKTSGCKAF-KLTSIAGAYWRGDEKRAMLQRVYGTAFADKKELDAYLARIEEA 239

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK--IKDDYEEINTPQ 298
           +KRDHRKL +E+DLF   ++ G+G++ WH KG  + +T++    RK  +K  Y+ +  PQ
Sbjct: 240 KKRDHRKLGKELDLFSFNDEVGAGLVIWHPKG-AMLRTILEDFERKEHLKRGYDIVVGPQ 298

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L   LWQ+SGH+++YR NM+       T  D + + +KPMNC  H+ ++   L+SYR+L
Sbjct: 299 ILKTELWQRSGHYENYRENMYF------TTVDEQGYGVKPMNCLAHMMIYRSQLRSYRDL 352

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R  E G+V+R+E +G LHGL+RVRGFTQDDAH+ CT EQ+  E   +   +  +   F
Sbjct: 353 PLRYFELGTVHRHERAGVLHGLLRVRGFTQDDAHILCTPEQLDAEIKGVIQFVTEVMGIF 412

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD-RINTGVLLGEGAFYGP 477
           GFE  M +LSTRPEK +GSD  W+ A +    +L+ +K+S +   IN G    +GAFYGP
Sbjct: 413 GFEFEM-ELSTRPEKSIGSDDAWELATS---ALLNALKDSGRPFEINEG----DGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  L+DA+ R WQC TIQ DF LP RF+  YV++  EK  PVM+HR + G+IERFIG+
Sbjct: 465 KIDIKLRDALDRRWQCATIQCDFTLPERFDLTYVDADGEKKRPVMVHRVILGAIERFIGV 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE+F GN P WL+P+QA + T+T + + YAQ   + L++  + ++ DFRNE + +KIRE
Sbjct: 525 LIEHFAGNFPTWLAPVQATIVTVTDNQIPYAQAAFDTLRAAGVRVQKDFRNEKLGFKIRE 584

Query: 598 HSIKKIPIIIICGDKE 613
             ++KIP +++ GDKE
Sbjct: 585 AQLQKIPYMLVVGDKE 600


>gi|30262390|ref|NP_844767.1| threonyl-tRNA synthetase [Bacillus anthracis str. Ames]
 gi|47527681|ref|YP_019030.1| threonyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49185231|ref|YP_028483.1| threonyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|165870612|ref|ZP_02215266.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167633022|ref|ZP_02391348.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|167639601|ref|ZP_02397871.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|170686938|ref|ZP_02878157.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|170706731|ref|ZP_02897190.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|177649587|ref|ZP_02932589.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190565155|ref|ZP_03018075.1| threonyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|227814802|ref|YP_002814811.1| threonyl-tRNA synthetase [Bacillus anthracis str. CDC 684]
 gi|229603163|ref|YP_002866723.1| threonine--tRNA ligase [Bacillus anthracis str. A0248]
 gi|254684964|ref|ZP_05148824.1| threonyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066]
 gi|254722370|ref|ZP_05184158.1| threonyl-tRNA synthetase [Bacillus anthracis str. A1055]
 gi|254737411|ref|ZP_05195115.1| threonyl-tRNA synthetase [Bacillus anthracis str. Western North
           America USA6153]
 gi|254743403|ref|ZP_05201088.1| threonyl-tRNA synthetase [Bacillus anthracis str. Kruger B]
 gi|254751726|ref|ZP_05203763.1| threonyl-tRNA synthetase [Bacillus anthracis str. Vollum]
 gi|254760245|ref|ZP_05212269.1| threonyl-tRNA synthetase [Bacillus anthracis str. Australia 94]
 gi|30257021|gb|AAP26253.1| threonine--tRNA ligase [Bacillus anthracis str. Ames]
 gi|47502829|gb|AAT31505.1| threonyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49179158|gb|AAT54534.1| threonyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|164713767|gb|EDR19290.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167512310|gb|EDR87686.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|167531834|gb|EDR94499.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|170128462|gb|EDS97330.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|170668989|gb|EDT19733.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|172084661|gb|EDT69719.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190563182|gb|EDV17147.1| threonyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|227004862|gb|ACP14605.1| threonine--tRNA ligase [Bacillus anthracis str. CDC 684]
 gi|229267571|gb|ACQ49208.1| threonine--tRNA ligase [Bacillus anthracis str. A0248]
          Length = 639

 Score =  579 bits (1492), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 281/633 (44%), Positives = 435/633 (68%), Gaps = 17/633 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N ++ DL   + E + +EIIT
Sbjct: 6   IEIKFPDGSVKEFVKGITLEEIAGSISSSLKKKAVAGNVNDELYDLRRNIEENAEVEIIT 65

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +    + + RHS AHI+A+AV+ ++ ++ + +GP+IE+GFYYD D     + ++L +IE
Sbjct: 66  IDSNEGVEIARHSAAHILAQAVKRLYGDINLGVGPVIENGFYYDMDLPSSVNVEDLRKIE 125

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M++II  +    +  +S E+A +LF+   +  K+E+LE+IP+ E+VTLY+QGE+ DLC
Sbjct: 126 KEMKKIINENIKVERVEVSREEAAKLFQEMNDRLKLELLEAIPSGESVTLYKQGEFVDLC 185

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG + K F+L  V+GAYWRGDSN  +L RIYG A+++Q+EL +YL+F+EE+ K
Sbjct: 186 RGPHLPSTGYL-KVFQLTHVSGAYWRGDSNNQVLQRIYGVAFSSQKELEEYLHFVEEAAK 244

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           R+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R   K+ +Y+E+ TP +++Q
Sbjct: 245 RNHRKLGNELELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQ 304

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            +W++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R+
Sbjct: 305 EVWERSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIRM 358

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG V+R+E SG+L+GL+RVR F QDDAH+F T EQ+ +E   +   I  +YK FGFE 
Sbjct: 359 CEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPEQIEDEIKSVMAQIDYVYKTFGFE- 417

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +G D LW+ AE  ++ VL ++  + + R+N     G+GAFYGPK ++ 
Sbjct: 418 YEVELSTRPEDSMGDDELWEQAEASLENVLQSL--NYKYRLNE----GDGAFYGPKIDFH 471

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+ R  QCGTIQ+DF +P +F+  Y++  +EK  PV+IHRAV GS++RF+ I+IE+F
Sbjct: 472 IKDALNRSHQCGTIQLDFQMPEKFDLNYIDEKNEKRRPVVIHRAVLGSLDRFLAILIEHF 531

Query: 543 KGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            G  P W++P+Q  V  ++++  V+YA E+A+ L    + +E D R+E + YKIRE  ++
Sbjct: 532 GGAFPAWVAPVQVKVIPVSNAVHVQYADEVADKLAQAGVRVERDMRDEKLGYKIREAQMQ 591

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           K+P +++ GDKE    ++ +R++G   +  + L
Sbjct: 592 KVPYVLVIGDKEMENGAVNVRKYGEEKSGVIEL 624


>gi|47565742|ref|ZP_00236782.1| threonyl-tRNA synthetase [Bacillus cereus G9241]
 gi|47557378|gb|EAL15706.1| threonyl-tRNA synthetase [Bacillus cereus G9241]
          Length = 639

 Score =  579 bits (1492), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 281/633 (44%), Positives = 435/633 (68%), Gaps = 17/633 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N  + DL   + E + +EI+T
Sbjct: 6   IEIKFPDGSVKEFVKGITLEEIAGSISGSLKKKAVAGKVNDGLYDLRRNIEENAEVEIVT 65

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +    + + RHS AHI+A+A++ I+  V + +GP+IE+GFYYD D     + ++L +IE
Sbjct: 66  IDSNEGVEIARHSAAHILAQAIKRIYGNVNLGVGPVIENGFYYDMDLPSSVNVEDLREIE 125

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M++II  +    +  +S E+A +LF+   +  K+E+LE+IP++E+VTLY+QGE+ DLC
Sbjct: 126 KEMKKIINENIKIERVEVSREEAAKLFQEMNDRLKLELLEAIPSEESVTLYKQGEFVDLC 185

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG +K  F+L  V+GAYWRGDSN  +L RIYG A+++Q+EL +YL+F+EE+ K
Sbjct: 186 RGPHLPSTGYLKA-FQLTHVSGAYWRGDSNNQVLQRIYGVAFSSQKELEEYLHFVEEAAK 244

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           R+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R   K+ +Y+E+ TP +++Q
Sbjct: 245 RNHRKLGSELELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQ 304

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            +W++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R+
Sbjct: 305 EVWERSGHWGHYKDNMYFSEV------DHKSFALKPMNCPGHMLMFKNKLHSYRELPIRM 358

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG V+R+E SG+L+GL+RVR F QDDAH+F T EQ+ +E   +   I  +YK FGF+ 
Sbjct: 359 CEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPEQIEDEIKSVMKQIDYVYKIFGFQ- 417

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +G D LW+ AE+ +  VL ++  + + R+N     G+GAFYGPK ++ 
Sbjct: 418 YEVELSTRPEDSMGDDKLWEQAESALANVLHSL--NYKYRLNE----GDGAFYGPKIDFH 471

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+ R  QCGTIQ+DF +P +F+  Y++  +EK  PV+IHRAV GS++RF+ I+IE+F
Sbjct: 472 IKDALNRSHQCGTIQLDFQMPEKFDLNYIDEKNEKRRPVVIHRAVLGSLDRFLAILIEHF 531

Query: 543 KGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            G  P W++P+Q  V  ++++  V+YA EIA+ L    + +E D R+E + YKIRE  ++
Sbjct: 532 GGAFPAWVAPVQVKVIPVSNAVHVQYADEIADKLAQAGVRVERDVRDEKLGYKIREAQMQ 591

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           K+P +++ GDKE    ++ +R++G   ++ + L
Sbjct: 592 KVPYVLVIGDKEMENGAVNVRKYGEEKSEVIEL 624


>gi|218231087|ref|YP_002367070.1| threonyl-tRNA synthetase [Bacillus cereus B4264]
 gi|218159044|gb|ACK59036.1| threonine--tRNA ligase [Bacillus cereus B4264]
          Length = 640

 Score =  578 bits (1491), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 281/633 (44%), Positives = 436/633 (68%), Gaps = 17/633 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N  + DL   + E + +EIIT
Sbjct: 6   IEIKFPDGSVKEFVNGVTLEEIAGSISSSLKKKAVAGKVNDGLYDLRRNIEENAEVEIIT 65

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +  + + + RHS AHI+A+AV+ ++ ++ + +GP+IE+GFYYD D     + ++L +IE
Sbjct: 66  IDSNKGVEIARHSAAHILAQAVKRLYGDINLGVGPVIENGFYYDMDLPSSVNIEDLRKIE 125

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M++II  +    +  +S E+A +LF+   +  K+E+LE+IP+ E+VTLY+QGE+ DLC
Sbjct: 126 KEMKKIINENIKIERVEVSREEAAKLFQEMNDRLKLELLEAIPSGESVTLYKQGEFVDLC 185

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG +K  F+L  V+GAYWRGDSN  +L RIYG A+++Q+EL +YL+F+EE+ K
Sbjct: 186 RGPHLPSTGYLKA-FQLTHVSGAYWRGDSNNQVLQRIYGVAFSSQKELEEYLHFVEEAAK 244

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           R+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R   K+  Y+E+ TP +++Q
Sbjct: 245 RNHRKLGSELELFMFSEEAPGMPFYLPKGQMIRNELEAFLREIQKEYKYQEVRTPFMMNQ 304

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            +W++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R+
Sbjct: 305 EVWERSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIRM 358

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG V+R+E SG+L+GL+RVR F QDDAH+F T +Q+ +E   +   I  +YK FGFE 
Sbjct: 359 CEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPKQIEDEIKSVMAQIDYVYKTFGFE- 417

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +G D LW+ AE  ++ VL ++  + + R+N     G+GAFYGPK ++ 
Sbjct: 418 YEVELSTRPEDSMGDDKLWEQAEAALENVLQSL--NYKYRLNE----GDGAFYGPKIDFH 471

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+ R  QCGTIQ+DF +P +F+  Y++ ++EK  PV+IHRAV GS++RF+ I+IE+F
Sbjct: 472 IKDALNRSHQCGTIQLDFQMPEKFDLNYIDENNEKKRPVVIHRAVLGSLDRFLAILIEHF 531

Query: 543 KGNLPLWLSPIQAIVTTITSSAVE-YAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            G  P W++P+Q  V  ++++  E YA EIA+ L    + +E D R+E + YKIRE  ++
Sbjct: 532 GGAFPAWVAPVQVKVIPVSNAVHEQYANEIAHKLAQAGVRVEQDARDEKLGYKIREAQMQ 591

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           K+P +++ GDKE    ++ +R++G   ++ ++L
Sbjct: 592 KVPYVLVIGDKEMENGAVNVRKYGEEKSEVIAL 624


>gi|56965736|ref|YP_177470.1| threonyl-tRNA synthetase [Bacillus clausii KSM-K16]
 gi|56911982|dbj|BAD66509.1| threonyl-tRNA synthetase [Bacillus clausii KSM-K16]
          Length = 637

 Score =  578 bits (1491), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 281/630 (44%), Positives = 422/630 (66%), Gaps = 18/630 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           I + FPDG  K FP   T +++A+SIS SL KK +   ING   DL+ P+ E + I +  
Sbjct: 6   IAIEFPDGKSKQFPQGVTLAELAQSISPSLYKKTIVGCINGVPSDLACPITENAHISLYD 65

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
                 + V+RHS AH++A A++ ++P V + +GP+I DGF+YD   +QP +  +L +IE
Sbjct: 66  VASKEGIEVLRHSTAHLLAHALKRLYPAVHLGVGPVIGDGFFYDVALDQPITVGDLLRIE 125

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           + M++II  D    ++ ++ EKA++LF  K++  K+E+LE IP  E VT+Y QG+++DLC
Sbjct: 126 QMMKQIIKEDMEITRKEVTREKAKQLF--KQDPLKLELLEDIPPDETVTVYEQGDFYDLC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG++K F KL KV+GAYWRG+S+  ML RIYG A+ T+ EL  Y  FLEE+EK
Sbjct: 184 RGPHIPSTGKIKHF-KLTKVSGAYWRGNSDNQMLQRIYGVAFATKDELQDYFAFLEEAEK 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           R+HRKL +E++LF  +E+  G+ F+   G  I   L S++R  + K DY+E+ TP +++Q
Sbjct: 243 RNHRKLGKELELFMFSEEAPGMPFYLANGQIIRNELESFLRNLQAKYDYKEVRTPIMMNQ 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+QSGHWD Y+ NM+  +       D + FALKPMNCPGH+ +F +GL SYR+LP+R+
Sbjct: 303 RLWEQSGHWDHYKENMYFTQV------DEQQFALKPMNCPGHMLIFKNGLHSYRDLPIRM 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFG V+R+E SG+L+GL+RVR F QDDAH+F T +Q+  E      +I  +Y+ FGF K
Sbjct: 357 AEFGQVHRHEFSGALNGLLRVRTFCQDDAHIFVTPQQIEEEITLALKIIDHVYQVFGF-K 415

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             ++LSTRP+  +GS+ LW+ AE  ++ VL  +  +   ++N G    +GAFYGPK +  
Sbjct: 416 YEIELSTRPDDFMGSEHLWEQAETALENVLQKLNYAY--KVNEG----DGAFYGPKIDIH 469

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDAI R  QC T+Q+DF LP +F+  Y++  +EK  PV+IHRAVFGSI+RF+GI+IE+F
Sbjct: 470 IKDAIQRSHQCATVQLDFQLPEKFDLTYIDKQNEKKRPVVIHRAVFGSIDRFLGILIEHF 529

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P+WL+P+Q  +  ++   ++Y   I + LK   + +  D  +E + YKIR+  ++K
Sbjct: 530 AGAFPVWLAPVQVQIVPVSHVHLDYCLTIQSELKQVGVRVNIDESDEKLGYKIRKAQMQK 589

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKV 632
           IP  I+ GD E  E ++ +R++G   T++V
Sbjct: 590 IPCTIVLGDNELKEETVTVRQYGKPETERV 619


>gi|296127837|ref|YP_003635089.1| threonyl-tRNA synthetase [Brachyspira murdochii DSM 12563]
 gi|296019653|gb|ADG72890.1| threonyl-tRNA synthetase [Brachyspira murdochii DSM 12563]
          Length = 643

 Score =  578 bits (1491), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 282/625 (45%), Positives = 409/625 (65%), Gaps = 18/625 (2%)

Query: 25  DVAESISRSLAKKAVAVAINGKVCDLS-DPVREGSIEIITPEDPRSLAVIRHSCAHIMAE 83
           D  +  ++  +K AVA   NG   DL+  P  +G +E+I       L V+RHS +H+MA+
Sbjct: 21  DFLKQNAKKDSKDAVAAKFNGTEVDLTYTPETDGDLELILTTTNEGLEVLRHSTSHLMAQ 80

Query: 84  AVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSH 143
           AV+ ++P  QV IGP I+DGFYYDFD E+PF+ ++L +IE +M++II  + P +++ ++ 
Sbjct: 81  AVRRLYPNTQVTIGPAIKDGFYYDFDAEKPFTEEDLPKIEDEMKKIIKENIPVVRKVMNK 140

Query: 144 EKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKV 203
            +A E F+   E YKVEI+E I A + V+ Y QG++ DLCRGPHV STG +K + KLM V
Sbjct: 141 NEAIEYFKKANEPYKVEIIEGIDA-DTVSFYEQGDFIDLCRGPHVPSTGYIKSY-KLMSV 198

Query: 204 AGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGS 263
           AG+YWRGDSN  MLSRIYGTA+ +++ L +YL  L+E+++RDHRKL +E++LF   E+G 
Sbjct: 199 AGSYWRGDSNNKMLSRIYGTAFESKEALDKYLKRLKEAKERDHRKLGKELNLFSFHEEGP 258

Query: 264 GVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK 322
           G  FWH +G  I++ + SY+R +  K  Y EI TP +L++ LW +SGHWD+Y+ NM+  +
Sbjct: 259 GFPFWHPRGMVIYKAVESYIRNENDKRGYVEIKTPAILNEELWHRSGHWDNYKENMYFTE 318

Query: 323 CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMR 382
                  D   +A+KPMNCPG + V+N  + SYR+LP+R+AE G V+R+E SG+LHGL R
Sbjct: 319 I------DETKYAVKPMNCPGGLIVYNSNIHSYRDLPLRVAELGFVHRHELSGALHGLFR 372

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWD 442
           VR FTQDDAH+FCT+EQ+ +E +      +S+YKDFGFE   + +STRP K +GSD +W+
Sbjct: 373 VRAFTQDDAHIFCTEEQLGDEIINTIEYYLSVYKDFGFENFEIFVSTRPAKSIGSDEIWE 432

Query: 443 DAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNL 502
            A   +   LD +       I   +  G+GAFYGPK ++ +KD + R+WQCGT+QVDF+L
Sbjct: 433 LATKSLINALDKLG------IKYKINEGDGAFYGPKIDFNIKDVLDRNWQCGTLQVDFSL 486

Query: 503 PSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITS 562
           P RF   Y      K  PVM+HRA+ GS+ERFIGI++E++ G  PLWLSP+Q  V  +  
Sbjct: 487 PMRFEISYEGKDGRKHTPVMLHRAILGSMERFIGILVEHYNGKFPLWLSPLQVAVVNVLD 546

Query: 563 --SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
             S ++   E+A  LK     +ETD  NE +  KI+++ +++ P  +I G +E S   + 
Sbjct: 547 EKSQIDRVNEVAKALKDAGFRVETDEGNENLGTKIKKYRLQRTPYTVIIGAEEVSNGKLS 606

Query: 621 IRRFGSTTTQKVSLLDAIPILTKES 645
           IR   S   + + L + I  L KES
Sbjct: 607 IRTRSSQEIKDMDLNEFIEKLKKES 631


>gi|324326401|gb|ADY21661.1| threonyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 639

 Score =  578 bits (1491), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 282/633 (44%), Positives = 431/633 (68%), Gaps = 17/633 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N  + DL   + E + +EIIT
Sbjct: 6   IEIKFPDGSVKEFVKGITLEEIAGSISNSLKKKAVAGKVNDGLYDLRRNIEENAEVEIIT 65

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +    + + RHS AHI+A+AV+ ++ ++ + +GP+IE+GFYYD D     +  +L +IE
Sbjct: 66  LDSDEGVEIARHSAAHILAQAVKRLYGDINLGVGPVIENGFYYDMDLPSSVNVQDLRKIE 125

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M+ II  +    +  +S E+A +LF+   +  K+E+LE+IP +E+VTLY+QGE+ DLC
Sbjct: 126 KEMKNIIKENINIERVEVSREEAAKLFQEMNDRLKLELLEAIPDEESVTLYKQGEFVDLC 185

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG +K  F+L  V+GAYWRGDSN  +L RIYG A+++Q+EL +YL+F+EE+ K
Sbjct: 186 RGPHLPSTGYLKA-FQLTHVSGAYWRGDSNNQVLQRIYGVAFSSQKELEEYLHFVEEAAK 244

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           R+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R   K+ +Y+E+ TP +++Q
Sbjct: 245 RNHRKLGNELELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQ 304

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            +W++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R+
Sbjct: 305 EVWERSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIRM 358

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG V+R+E SG+L+GL+RVR F QDDAH+F T EQ+ +E   +   I  +YK FGFE 
Sbjct: 359 CEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPEQIEDEIKSVMAQIDYVYKTFGFE- 417

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +G D LW+ AE  +  VL ++  + + R+N     G+GAFYGPK ++ 
Sbjct: 418 YEVELSTRPEDSMGDDKLWEQAEAALANVLHSL--NCKYRLNE----GDGAFYGPKIDFH 471

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+ R  QCGTIQ+DF +P +F+  Y++  +EK  PV+IHRAV GS++RF+ I+IE+F
Sbjct: 472 IKDALNRSHQCGTIQLDFQMPEKFDLNYIDEKNEKRRPVVIHRAVLGSLDRFLAILIEHF 531

Query: 543 KGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            G  P W++P+Q  V  ++++  V+YA EIA+ L    + +E D R E + YKIRE  ++
Sbjct: 532 GGAFPAWVAPVQVKVIPVSNAVHVQYADEIADKLAQAGVRVERDVRGEKLGYKIREAQMQ 591

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           K+P +++ GDKE    ++ +R++G   ++ + L
Sbjct: 592 KVPYVLVIGDKEMENGAVNVRKYGEEKSEVIEL 624


>gi|229150586|ref|ZP_04278801.1| Threonyl-tRNA synthetase [Bacillus cereus m1550]
 gi|228632895|gb|EEK89509.1| Threonyl-tRNA synthetase [Bacillus cereus m1550]
          Length = 640

 Score =  578 bits (1491), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 281/633 (44%), Positives = 436/633 (68%), Gaps = 17/633 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N  + DL   + E + +EIIT
Sbjct: 6   IEIKFPDGSVKEFVNGVTLEEIAGSISSSLKKKAVAGKVNDGLYDLRRNIEENAEVEIIT 65

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +    + + RHS AHI+A+AV+ ++ ++ + +GP+IE+GFYYD D     + ++L +IE
Sbjct: 66  IDSNEGVEIARHSAAHILAQAVKRLYGDINLGVGPVIENGFYYDMDLPSSVNIEDLRRIE 125

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M++II  +    +  +S E+A +LF+   +  K+E+LE+IP+ E+VTLY+QGE+ DLC
Sbjct: 126 KEMKKIINENIKIERVEVSREEAAKLFQEMNDRLKLELLEAIPSGESVTLYKQGEFVDLC 185

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG +K  F+L  V+GAYWRGDSN  +L RIYG A+++Q+EL +YL+F+EE+ K
Sbjct: 186 RGPHLPSTGYLKA-FQLTHVSGAYWRGDSNNQVLQRIYGVAFSSQKELEEYLHFVEEAAK 244

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           R+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R   K+ +Y+E+ TP +++Q
Sbjct: 245 RNHRKLGSELELFMFSEEAPGMPFYLPKGQMIRNELEAFLREIQKEYNYQEVRTPFMMNQ 304

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            +W++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R+
Sbjct: 305 EVWERSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIRM 358

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG V+R+E SG+L+GL+RVR F QDDAH+F T +Q+ +E   +   I  +YK FGFE 
Sbjct: 359 CEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPKQIEDEIKSVMAQIDYVYKTFGFE- 417

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +G D LW+ AE  ++ VL ++  + + R+N     G+GAFYGPK ++ 
Sbjct: 418 YEVELSTRPEDSMGDDKLWEQAEAALENVLQSL--NYKYRLNE----GDGAFYGPKIDFH 471

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+ R  QCGTIQ+DF +P +F+  Y++ ++EK  PV+IHRAV GS++RF+ I+IE+F
Sbjct: 472 IKDALNRSHQCGTIQLDFQMPEKFDLNYIDENNEKKRPVVIHRAVLGSLDRFLAILIEHF 531

Query: 543 KGNLPLWLSPIQAIVTTITSSAVE-YAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            G  P W++P+Q  V  ++++  E YA EIA+ L    + +E D R+E + YKIRE  ++
Sbjct: 532 GGAFPAWVAPVQVKVIPVSNAVHEQYANEIAHKLAQAGVRVEQDARDEKLGYKIREAQMQ 591

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           K+P +++ GDKE    ++ +R++G   ++ ++L
Sbjct: 592 KVPYVLVIGDKEMENGAVNVRKYGEEKSEVIAL 624


>gi|229144961|ref|ZP_04273357.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|228638483|gb|EEK94917.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
          Length = 640

 Score =  578 bits (1491), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 282/633 (44%), Positives = 434/633 (68%), Gaps = 17/633 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N  + DL   + E + +EIIT
Sbjct: 6   IEIKFPDGSVKEFVKGITLEEIAGSISSSLKKKAVAGKVNDGLYDLRRNIEENAEVEIIT 65

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +    + + RHS AHI+A+AV+ ++ ++ + +GP+IE+GFYYD D     + ++L +IE
Sbjct: 66  IDSNEGVEITRHSAAHILAQAVKRMYGDINLGVGPVIENGFYYDMDLPSSVNVEDLRKIE 125

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M++II  +    +  +S E+A +LF+   +  K+E+LE+IP+ E+VTLY+QGE+ DLC
Sbjct: 126 KEMKKIINENIKIERVEVSREEAAKLFQEMNDRLKLELLEAIPSGESVTLYKQGEFVDLC 185

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG +K  F+L  V+GAYWRGDSN  +L RIYG A++ Q+EL +YL+F+EE+ K
Sbjct: 186 RGPHLPSTGYLKA-FQLTHVSGAYWRGDSNNQVLQRIYGVAYSFQKELEEYLHFVEEATK 244

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           R+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R   K+ +Y+E+ TP +++Q
Sbjct: 245 RNHRKLGNELELFMFSEEAPGMPFYLPKGQMIRNELEAFLREIQKEYNYQEVRTPFMMNQ 304

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            +W++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R+
Sbjct: 305 EVWERSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIRM 358

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG V+R+E SG+L+GL+RVR F QDDAH+F T +Q+ NE   +   I  +YK FGFE 
Sbjct: 359 CEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPKQIENEIKSVMAQIDYVYKTFGFE- 417

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +G D LW+ AE  ++ VL ++  + + R+N     G+GAFYGPK ++ 
Sbjct: 418 YEVELSTRPEDSMGDDKLWEQAEAALENVLQSL--NYKYRLNE----GDGAFYGPKIDFH 471

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+ R  QCGTIQ+DF +P +F+  Y++ ++EK  PV+IHRAV GS++RF+ I+IE+F
Sbjct: 472 IKDALNRSHQCGTIQLDFQMPEKFDLNYIDENNEKKRPVVIHRAVLGSLDRFLAILIEHF 531

Query: 543 KGNLPLWLSPIQAIVTTITSSAVE-YAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            G  P W++P+Q  V  ++++  E YA EIA  L    + +E D R+E + YKIRE  ++
Sbjct: 532 GGAFPAWVAPVQVKVIPVSNAVHEQYANEIALKLAQAGVRVEQDARDEKLGYKIREAQMQ 591

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           K+P +++ GDKE    ++ +R++G   ++ ++L
Sbjct: 592 KVPYVLVIGDKEMENGAVNVRKYGEEKSEVIAL 624


>gi|320529200|ref|ZP_08030292.1| threonyl-tRNA synthetase [Selenomonas artemidis F0399]
 gi|320138830|gb|EFW30720.1| threonyl-tRNA synthetase [Selenomonas artemidis F0399]
          Length = 639

 Score =  578 bits (1491), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 288/644 (44%), Positives = 411/644 (63%), Gaps = 18/644 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDP-VREGSIEIIT 63
           +KLT PDGS++      T  DV + +S SLAKKA+A +++GK  DL  P  ++ + +++T
Sbjct: 2   VKLTLPDGSVREVEYGTTLLDVVKQMSNSLAKKALAASLDGKTVDLMTPATQDAAFQVLT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPE--VQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
            ED      +RH+C+HIMA+AV+ ++ +  VQ+AIGP IE+GFYYDFD ++  +  +L  
Sbjct: 62  FEDAGGRLALRHTCSHIMAQAVKRLYKDCNVQLAIGPAIENGFYYDFDMDRQLTDADLRD 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK+M++I+  +    ++ +   +A   F  K E YKVE++E +P    ++ Y QGE+ D
Sbjct: 122 IEKEMKKIVKENLKLERREIPRSEAIAYFREKGENYKVELIEDLPEDVTISTYTQGEFTD 181

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LC GPHV STG+VK   +L  +AGAYWRG     ML RIYGTA+  Q+EL  YL+ LEE+
Sbjct: 182 LCAGPHVLSTGKVKAL-RLQSIAGAYWRGSEKNKMLQRIYGTAFEKQEELDAYLHMLEEA 240

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           EKRDHRKL RE+DLF + E+G G  F+H  G  +   L++Y R    +  Y EI+TP +L
Sbjct: 241 EKRDHRKLGRELDLFSLHEEGPGFPFFHPNGMILRNELLNYWREVHRRYGYSEISTPVIL 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            + LW+ SGHW  YR NM+  +       D   +A+KPMNCPG + V+   L SYR+LP+
Sbjct: 301 SRKLWETSGHWFHYRENMYTTQI------DEEDYAIKPMNCPGCMLVYRSQLHSYRDLPL 354

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLAE G V+R+E SG+LHGL RVR FTQDDAH+F T EQ+  E     +L   +Y+ FG 
Sbjct: 355 RLAELGLVHRHELSGALHGLFRVRNFTQDDAHLFVTPEQIEGEIQHTIDLFDEVYRTFGL 414

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
                +LSTRP+  +GSD +W+ A +   G+   ++N   D I   V  G+GAFYGPK +
Sbjct: 415 -SYKAELSTRPDDSMGSDEMWELATS---GLQKALENRGLDYI---VNEGDGAFYGPKID 467

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           + L+D+IGR WQCGTIQ+D +LP +F+  YV    EK  PVM+HR V+GSIERFIGI+IE
Sbjct: 468 FHLRDSIGRTWQCGTIQLDMSLPEKFDLTYVGEDGEKHRPVMLHRVVYGSIERFIGILIE 527

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           NF G  P+W++P+Q  +  IT    EYA+E+   +    + +E D RNE   YKIRE  +
Sbjct: 528 NFAGAFPVWMTPVQVRILPITERHAEYAEELRKRMFDRGIRVEVDNRNEKTGYKIRESQV 587

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KK P  ++ GD+E    ++ +R++G   +  +S  D I  + K+
Sbjct: 588 KKTPYTLVVGDQEQESGTVALRKYGEKDSTVMSADDFIAFVEKK 631


>gi|52143093|ref|YP_083736.1| threonyl-tRNA synthetase [Bacillus cereus E33L]
 gi|51976562|gb|AAU18112.1| threonine--tRNA ligase (threonyl-tRNA synthetase) [Bacillus cereus
           E33L]
          Length = 639

 Score =  578 bits (1490), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 280/633 (44%), Positives = 433/633 (68%), Gaps = 17/633 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N ++ DL   + E + +EIIT
Sbjct: 6   IEINFPDGSVKEFVKGITLEEIAGSISNSLKKKAVAGKVNDELYDLRRNIEENAEVEIIT 65

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +    + + RHS AHI+A+AV+ ++ ++ + +GP+IE+GFYYD D     + ++L +IE
Sbjct: 66  IDSNEGVEIARHSAAHILAQAVKRLYGDINLGVGPVIENGFYYDMDLLSSVNVEDLRKIE 125

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M+ II  +    +  +S E+A +LF+   +  K+E+LE+IP +E+VTLY+QGE+ DLC
Sbjct: 126 KEMKNIIKENVKIERVEVSREEAAKLFQEMNDRLKLELLEAIPDEESVTLYKQGEFVDLC 185

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG +K  F+L  V+GAYWRGDSN  +L RIYG A+++Q+ L +YL+F+EE+ K
Sbjct: 186 RGPHLPSTGYLKA-FQLTHVSGAYWRGDSNNQVLQRIYGVAFSSQKALEEYLHFVEEAAK 244

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           R+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R   K+ +Y+E+ TP +++Q
Sbjct: 245 RNHRKLGNELELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQ 304

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            +W++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R+
Sbjct: 305 EVWERSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIRM 358

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG V+R+E SG+L+GL+RVR F QDDAH+F T EQ+ +E   +   I  +YK FGFE 
Sbjct: 359 CEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPEQIEDEIKSVMAQIDYVYKTFGFE- 417

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +G D LW+ AE  ++ VL ++  + + R+N     G+GAFYGPK ++ 
Sbjct: 418 YEVELSTRPEDSMGDDKLWEQAEASLENVLQSL--NYKYRLNE----GDGAFYGPKIDFH 471

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+ R  QCGTIQ+DF +P +F+  Y++  +EK  PV+IHRAV GS++RF+ I+IE+F
Sbjct: 472 IKDALNRSHQCGTIQLDFQMPEKFDLNYIDEKNEKRRPVVIHRAVLGSLDRFLAILIEHF 531

Query: 543 KGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            G  P W++P+Q  V  ++++  V+YA E+A+ L    + +E D R+E + YKIRE  ++
Sbjct: 532 GGAFPAWIAPVQVKVIPVSNAVHVQYADEVADKLAQAGVRVERDMRDEKLGYKIREAQMQ 591

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           K+P +++ GDKE    ++ +R++G   +  + L
Sbjct: 592 KVPYVLVIGDKEMENGAVNVRKYGEEKSDVIEL 624


>gi|229085293|ref|ZP_04217535.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-44]
 gi|228698012|gb|EEL50755.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-44]
          Length = 642

 Score =  578 bits (1490), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 288/643 (44%), Positives = 431/643 (67%), Gaps = 17/643 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           I++ FPDGSIK F    T  ++A SIS SL KKAVA  +NG+V DL   +     ++IIT
Sbjct: 6   IEIIFPDGSIKEFVKGITLEEIAGSISTSLKKKAVAGKVNGQVFDLRRNIEGNAKVQIIT 65

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +    + + RH+ AHI+A+AV+ I+ +V+  IGP+IE+GFYYD D     + ++L +I 
Sbjct: 66  MDSAEGVEIARHTSAHILAQAVKRIYGDVKFGIGPVIENGFYYDMDLPNSIAVEDLPKIG 125

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +MQ I+  +    +  ++ ++A ELF+   +  K+E+LE+IP  E VT+Y+QGE+ DLC
Sbjct: 126 NEMQNIVNENLKIERVEITRKEAEELFQDVNDHLKLELLEAIPEGEVVTIYKQGEFVDLC 185

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG +K  F+L  V+GAYWRGDSN  +L RIYG A+++Q+EL  YL F+EE+ K
Sbjct: 186 RGPHLPSTGYLKA-FRLTHVSGAYWRGDSNNQVLQRIYGVAFSSQKELESYLQFVEEAAK 244

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           R+HRKL  E++LF  +E+  G+ F+  KG  I   L S++R  + K DY+E+ TP +++Q
Sbjct: 245 RNHRKLGNELELFMFSEEAPGMPFYLPKGQIIRNELESFLREIQQKYDYQEVRTPIMMNQ 304

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y+ NM+  +       D ++FALKPMNCPGH+ +F H L+SYR+LP+R+
Sbjct: 305 GLWEESGHWDHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKHKLRSYRDLPIRM 358

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG V+R+E SG+L+GL+RVR F QDDAH+F T EQ+ +E   +   I  +Y+ FGFE 
Sbjct: 359 CEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPEQIESEIKSVLQQIDYVYRTFGFE- 417

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +G   LW+ AE+ ++ VL+++  + + R+N     G+GAFYGPK ++ 
Sbjct: 418 YEVELSTRPEDSMGDVELWNQAESALENVLESL--NYKYRVNE----GDGAFYGPKIDFH 471

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+ R  QCGT+Q+DF +P +F+  Y++  +EK  PV+IHRAV GS +RF+GI+IE+F
Sbjct: 472 IKDALKRSHQCGTVQLDFQMPEKFDLNYIDERNEKRRPVVIHRAVLGSFDRFLGILIEHF 531

Query: 543 KGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            G  P WL+ +Q  +  +++    EY +EI   L+S  L +E D R E + YKIRE  I+
Sbjct: 532 GGAFPAWLASVQVKIIPVSNLVHEEYTKEIEEKLQSVGLRVERDVRGEKLGYKIREAQIQ 591

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K+P +++ GDKE    ++ +R++G   ++ VSL   I  L  E
Sbjct: 592 KVPYVLVIGDKEMENGAVNVRKYGEEKSEVVSLATFIESLQVE 634


>gi|301053905|ref|YP_003792116.1| threonyl-tRNA synthetase [Bacillus anthracis CI]
 gi|300376074|gb|ADK04978.1| threonyl-tRNA synthetase [Bacillus cereus biovar anthracis str. CI]
          Length = 639

 Score =  578 bits (1490), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 281/633 (44%), Positives = 434/633 (68%), Gaps = 17/633 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N ++ DL   + E + +EIIT
Sbjct: 6   IEIKFPDGSVKEFVKGITLEEIAGSISSSLKKKAVAGKVNDELYDLRRNIEENAEVEIIT 65

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +    + + RHS AHI+A+AV+ ++ ++ + +GP+IE+GFYYD D     + ++L +IE
Sbjct: 66  IDSNEGVEIARHSAAHILAQAVKRLYGDINLGVGPVIENGFYYDMDLPSSVNVEDLRKIE 125

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M++II  +    +  +S E+A +LF+   +  K+E+LE+IP+ E+VTLY+QGE+ DLC
Sbjct: 126 KEMKKIINENIKVERVEVSREEAAKLFQEMNDRLKLELLEAIPSGESVTLYKQGEFVDLC 185

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG +K  F+L  V+GAYWRGDSN  +L RIYG A+++Q+EL +YL+F+EE+ K
Sbjct: 186 RGPHLPSTGYLKA-FQLTHVSGAYWRGDSNNQVLQRIYGVAFSSQKELEEYLHFVEEAAK 244

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           R+HRKL  E++LF  +E+  G+ F+  KG  I   L  ++R   K+ +Y+E+ TP +++Q
Sbjct: 245 RNHRKLGNELELFMFSEEAPGMPFYLPKGQIIRNELEVFLREIQKEYNYQEVRTPFMMNQ 304

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            +W++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R+
Sbjct: 305 EVWERSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIRM 358

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG V+R+E SG+L+GL+RVR F QDDAH+F T EQ+ +E   +   I  +YK FGFE 
Sbjct: 359 CEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPEQIEDEIKSVMAQIDYVYKTFGFE- 417

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +G D LW+ AE  ++ VL ++  + + R+N     G+GAFYGPK ++ 
Sbjct: 418 YEVELSTRPEDSMGDDELWEQAEASLENVLQSL--NYKYRLNE----GDGAFYGPKIDFH 471

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+ R  QCGTIQ+DF +P +F+  Y++  +EK  PV+IHRAV GS++RF+ I+IE+F
Sbjct: 472 IKDALNRSHQCGTIQLDFQMPEKFDLNYIDEKNEKRRPVVIHRAVLGSLDRFLAILIEHF 531

Query: 543 KGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            G  P W++P+Q  V  ++++  V+YA E+A+ L    + +E D R+E + YKIRE  ++
Sbjct: 532 GGAFPAWVAPVQVKVIPVSNAVHVQYADEVADKLTQAGVRVERDMRDEKLGYKIREAQMQ 591

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           K+P +++ GDKE    ++ +R++G   +  + L
Sbjct: 592 KVPYVLVIGDKEMENGAVNVRKYGEEKSGVIEL 624


>gi|229190445|ref|ZP_04317445.1| Threonyl-tRNA synthetase [Bacillus cereus ATCC 10876]
 gi|228593058|gb|EEK50877.1| Threonyl-tRNA synthetase [Bacillus cereus ATCC 10876]
          Length = 640

 Score =  578 bits (1490), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 281/633 (44%), Positives = 435/633 (68%), Gaps = 17/633 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N  + DL   + E + +EIIT
Sbjct: 6   IEIKFPDGSVKEFVNGVTLEEIAGSISSSLKKKAVAGKVNDGLYDLRRDIEENAEVEIIT 65

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +    + + RHS AHI+A+AV+ ++ ++ + +GP+IE+GFYYD D     + ++L +IE
Sbjct: 66  IDSNEGVEIARHSAAHILAQAVKRLYGDINLGVGPVIENGFYYDMDLPSSVNIEDLRKIE 125

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M++II  +    +  +S E+A +LF+   +  K+E+LE+IP+ E+VTLY+QGE+ DLC
Sbjct: 126 KEMKKIINENIKIERVEVSREEAAKLFQEMNDRLKLELLEAIPSGESVTLYKQGEFVDLC 185

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG +K  F+L  V+GAYWRGDSN  +L RIYG A+++Q+EL +YL+F+EE+ K
Sbjct: 186 RGPHLPSTGYLKA-FQLTHVSGAYWRGDSNNQVLQRIYGVAFSSQKELEEYLHFVEEAAK 244

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           R+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R   K+  Y+E+ TP +++Q
Sbjct: 245 RNHRKLGSELELFMFSEEAPGMPFYLPKGQMIRNELEAFLREIQKEYKYQEVRTPFMMNQ 304

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            +W++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R+
Sbjct: 305 EVWERSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIRM 358

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG V+R+E SG+L+GL+RVR F QDDAH+F T +Q+ +E   +   I  +YK FGFE 
Sbjct: 359 CEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPKQIEDEIKSVMAQIDYVYKTFGFE- 417

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +G D LW+ AE  ++ VL ++  + + R+N     G+GAFYGPK ++ 
Sbjct: 418 YEVELSTRPEDSMGDDKLWEQAEAALENVLQSL--NYKYRLNE----GDGAFYGPKIDFH 471

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+ R  QCGTIQ+DF +P +F+  Y++ ++EK  PV+IHRAV GS++RF+ I+IE+F
Sbjct: 472 IKDALNRSHQCGTIQLDFQMPEKFDLNYIDENNEKKRPVVIHRAVLGSLDRFLAILIEHF 531

Query: 543 KGNLPLWLSPIQAIVTTITSSAVE-YAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            G  P W++P+Q  V  ++++  E YA EIA+ L    + +E D R+E + YKIRE  ++
Sbjct: 532 GGAFPAWVAPVQVKVIPVSNAVHEQYANEIAHKLAQAGVRVEQDARDEKLGYKIREAQMQ 591

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           K+P +++ GDKE    ++ +R++G   ++ ++L
Sbjct: 592 KVPYVLVIGDKEMENGAVNVRKYGEEKSEVIAL 624


>gi|229196601|ref|ZP_04323345.1| Threonyl-tRNA synthetase [Bacillus cereus m1293]
 gi|228586957|gb|EEK45031.1| Threonyl-tRNA synthetase [Bacillus cereus m1293]
          Length = 639

 Score =  578 bits (1490), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 283/633 (44%), Positives = 431/633 (68%), Gaps = 17/633 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N  + DL   +     +EIIT
Sbjct: 6   IEIKFPDGSVKEFVKGITLEEIAGSISNSLKKKAVAGKVNDGLYDLRRNIEGNAEVEIIT 65

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +    + + RHS AHI+A+A++ I+  V + +GP+IE+GFYYD D     + ++L +IE
Sbjct: 66  LDSNEGVEIARHSAAHILAQAIKRIYGNVNLGVGPVIENGFYYDMDLPSSVNVEDLREIE 125

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M++II  +    +  +S E+A +LF+   +  K+E+LE+IP++E+VTLY+QGE+ DLC
Sbjct: 126 KEMKKIINENIKIERVEVSREEAAKLFQEMNDRLKLELLEAIPSEESVTLYKQGEFVDLC 185

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG +K  F+L  V+GAYWRGDSN  +L RIYG A+++Q+EL +YL+F+EE+ K
Sbjct: 186 RGPHLPSTGYLKA-FQLTHVSGAYWRGDSNNQVLQRIYGVAFSSQKELEEYLHFVEEAAK 244

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           R+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R   K+ +Y+E+ TP +++Q
Sbjct: 245 RNHRKLGSELELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQ 304

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            +W++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R+
Sbjct: 305 EVWERSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIRM 358

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG V+R+E SG+L+GL+RVR F QDDAH+F T EQ+ +E   +   I  +YK FGFE 
Sbjct: 359 CEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPEQIEDEIKSVMAQIDYVYKTFGFE- 417

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +G D LW+ AE  +  VL ++  + + R+N     G+GAFYGPK ++ 
Sbjct: 418 YEVELSTRPEDSMGDDKLWEQAEAALANVLHSL--NCKYRLNE----GDGAFYGPKIDFH 471

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+ R  QCGTIQ+DF +P +F+  Y++  +EK  PV+IHRAV GS++RF+ I+IE+F
Sbjct: 472 IKDALNRSHQCGTIQLDFQMPEKFDLNYIDEKNEKRRPVVIHRAVLGSLDRFLAILIEHF 531

Query: 543 KGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            G  P W++P+Q  V  ++++  V+YA EI + L    + +E D R+E + YKIRE  ++
Sbjct: 532 GGAFPAWVAPVQVKVIPVSNAVHVQYADEIVDKLAQAGVRVERDVRDEKLGYKIREAQMQ 591

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           KIP +++ GDKE    ++ +R++G   ++ V L
Sbjct: 592 KIPYVLVIGDKEMENGAVNVRKYGEEKSEVVEL 624


>gi|228997455|ref|ZP_04157073.1| Threonyl-tRNA synthetase [Bacillus mycoides Rock3-17]
 gi|229005099|ref|ZP_04162823.1| Threonyl-tRNA synthetase [Bacillus mycoides Rock1-4]
 gi|228756201|gb|EEM05522.1| Threonyl-tRNA synthetase [Bacillus mycoides Rock1-4]
 gi|228762288|gb|EEM11216.1| Threonyl-tRNA synthetase [Bacillus mycoides Rock3-17]
          Length = 641

 Score =  578 bits (1489), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 287/643 (44%), Positives = 434/643 (67%), Gaps = 17/643 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I + FPDGS K++    T  ++A SIS SL KKAVA  +NG++ DL   + ++  I+IIT
Sbjct: 6   INIIFPDGSAKDYVKGITLEEIAASISSSLKKKAVAGKVNGQLFDLRRNIEQDAEIQIIT 65

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +    + V RH+ AHI+A+AV+ I+ +V++ +GP+IE+GFYYD D       ++L ++E
Sbjct: 66  MDSEEGIEVARHTSAHILAQAVKRIYGDVKLGVGPVIENGFYYDMDLPSSIGIEDLPKLE 125

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M+ I+  +    +  ++ ++A +LF+   +  K+E+LE+IP  E VT+Y+QGE+ DLC
Sbjct: 126 KEMKNIVNENLKIERVEITRKEAEKLFQDVNDHLKLELLEAIPENEIVTIYKQGEFVDLC 185

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG +K  F+L  V+GAYWRGDSN  +L RIYG A+++Q+EL  YL+F+EE+ K
Sbjct: 186 RGPHLPSTGYLKA-FQLTHVSGAYWRGDSNNQVLQRIYGVAFSSQKELESYLHFVEEAAK 244

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           R+HRKL  E++LF  +E+  G+ F+  KG  +   L S++R   ++ DY+E+ TP +++Q
Sbjct: 245 RNHRKLGNELELFMFSEEAPGMPFYLPKGQIVRNELESFLREIQQNYDYQEVRTPIMMNQ 304

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYR+LP+R+
Sbjct: 305 GLWEESGHWDHYKDNMYFSEV------DNKSFALKPMNCPGHMLIFKNKLHSYRDLPIRM 358

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG V+R+E SG+L+GL+RVR F QDDAH+F T EQ+ +E   +   I  +Y+ FGFE 
Sbjct: 359 CEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPEQIESEIKSVLKQIDYVYRTFGFE- 417

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +G D LW+ AE  ++ VL ++  +   R+N     G+GAFYGPK ++ 
Sbjct: 418 YEVELSTRPEDSMGDDELWNQAELSLENVLKSLNYNY--RVNE----GDGAFYGPKIDFH 471

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+ R  QCGT+Q+DF +P +F+  Y++  +EK  PV+IHRAV GS +RF+GI+IE+F
Sbjct: 472 IKDALQRSHQCGTVQLDFQMPEKFDLNYIDERNEKRRPVVIHRAVLGSFDRFLGILIEHF 531

Query: 543 KGNLPLWLSPIQAIVTTITSSAVE-YAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            G  P WL+P+Q  V  +++   E Y +EI   LKS  L  E D R+E + YKIRE  ++
Sbjct: 532 GGAFPTWLAPVQIKVIPVSNQVHEQYTKEIEEKLKSVGLRAERDARSEKLGYKIREAQLQ 591

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIP I++ GDKE    S+ +R++G   ++ VSL   +  + KE
Sbjct: 592 KIPYILVIGDKEMENGSVNVRKYGEEKSEVVSLSAFMESIRKE 634


>gi|206971420|ref|ZP_03232370.1| threonyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|228952703|ref|ZP_04114777.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|229069894|ref|ZP_04203176.1| Threonyl-tRNA synthetase [Bacillus cereus F65185]
 gi|206733405|gb|EDZ50577.1| threonyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|228713297|gb|EEL65190.1| Threonyl-tRNA synthetase [Bacillus cereus F65185]
 gi|228806979|gb|EEM53524.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
          Length = 640

 Score =  578 bits (1489), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 281/633 (44%), Positives = 435/633 (68%), Gaps = 17/633 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N  + DL   + E + +EIIT
Sbjct: 6   IEIKFPDGSVKEFVNGVTLEEIAGSISSSLKKKAVAGKVNDGLYDLRRNIEENAEVEIIT 65

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +    + + RHS AHI+A+AV+ ++ ++ + +GP+IE+GFYYD D     + ++L +IE
Sbjct: 66  IDSNEGVEIARHSAAHILAQAVKRLYGDINLGVGPVIENGFYYDMDLPSSVNIEDLRKIE 125

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M++II  +    +  +S E+A +LF+   +  K+E+LE+IP+ E+VTLY+QGE+ DLC
Sbjct: 126 KEMKKIINENIKIERVEVSREEAAKLFQEMNDRLKLELLEAIPSGESVTLYKQGEFVDLC 185

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG +K  F+L  V+GAYWRGDSN  +L RIYG A+++Q+EL +YL+F+EE+ K
Sbjct: 186 RGPHLPSTGYLKA-FQLTHVSGAYWRGDSNNQVLQRIYGVAFSSQKELEEYLHFVEEAAK 244

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           R+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R   K+  Y+E+ TP +++Q
Sbjct: 245 RNHRKLGSELELFMFSEEAPGMPFYLPKGQMIRNELEAFLREIQKEYKYQEVRTPFMMNQ 304

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            +W++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R+
Sbjct: 305 EVWERSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIRM 358

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG V+R+E SG+L+GL+RVR F QDDAH+F T +Q+ +E   +   I  +YK FGFE 
Sbjct: 359 CEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPKQIEDEIKSVMAQIDYVYKTFGFE- 417

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +G D LW+ AE  ++ VL ++  + + R+N     G+GAFYGPK ++ 
Sbjct: 418 YEVELSTRPEDSMGDDKLWEQAEAALENVLQSL--NYKYRLNE----GDGAFYGPKIDFH 471

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+ R  QCGTIQ+DF +P +F+  Y++ ++EK  PV+IHRAV GS++RF+ I+IE+F
Sbjct: 472 IKDALNRSHQCGTIQLDFQMPEKFDLNYIDENNEKKRPVVIHRAVLGSLDRFLAILIEHF 531

Query: 543 KGNLPLWLSPIQAIVTTITSSAVE-YAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            G  P W++P+Q  V  ++++  E YA EIA+ L    + +E D R+E + YKIRE  ++
Sbjct: 532 GGAFPAWVAPVQVKVIPVSNAVHEQYANEIAHKLAQAGVRVEQDARDEKLGYKIREAQMQ 591

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           K+P +++ GDKE    ++ +R++G   ++ ++L
Sbjct: 592 KVPYVLVIGDKEMENGAVNVRKYGEEKSEVIAL 624


>gi|163940157|ref|YP_001645041.1| threonyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|163862354|gb|ABY43413.1| threonyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
          Length = 639

 Score =  578 bits (1489), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 280/633 (44%), Positives = 432/633 (68%), Gaps = 17/633 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           I++ FPDGS+K F    T  ++A +IS SL KKA+A  +N +  DL   + E + +EII 
Sbjct: 6   IEIKFPDGSVKEFVKGITLEEIAGAISSSLKKKAIAGKVNDQSFDLRRNIEESAKVEIII 65

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +    + + RHS AHI+A+AV+ I+ +V + +GP+IE+GFYYD D     + ++L +IE
Sbjct: 66  MDSDEGIRIARHSAAHILAQAVKRIYGDVNLGVGPVIENGFYYDMDLPSSVNVEDLPKIE 125

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M+ II  +    +  +S E+A+ELF+   ++ K+E+LE+IP  E+VTLY+QGE+ DLC
Sbjct: 126 KEMKNIINENVKIERVEVSREEAKELFQEMNDSLKLELLEAIPNGESVTLYKQGEFVDLC 185

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG +K  F+L  V+GAYWRGDSN  +L RIYG A+++QQ+L +YL+F+EE+ K
Sbjct: 186 RGPHLPSTGYLKA-FQLTHVSGAYWRGDSNNQVLQRIYGVAFSSQQKLEEYLHFVEEAAK 244

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           R+HR+L  E++LF  +E+  G+ F+  KG  I   L +++R    + +Y+E+ TP +++Q
Sbjct: 245 RNHRELGSELELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQNEYNYQEVRTPFMMNQ 304

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R+
Sbjct: 305 ELWEKSGHWGHYKDNMYFSEV------DHKSFALKPMNCPGHMLMFKNKLHSYRELPIRM 358

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG V+R+E SG+L+GL+RVR F QDDAH+F T EQ+ +E   +   I  +YK FGFE 
Sbjct: 359 CEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPEQIEDEIQSVLAQIDYVYKTFGFE- 417

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +G D LW+ AE  ++ VL ++  + + R+N     G+GAFYGPK ++ 
Sbjct: 418 YEVELSTRPEDSMGDDKLWEQAELALENVLQSL--NYKYRLNE----GDGAFYGPKIDFH 471

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+ R  QCGT+Q+DF +P +F+  Y++ ++EK  PV+IHRAV GS++RF+ I+IE+F
Sbjct: 472 IKDALNRSHQCGTVQLDFQMPEKFDLNYIDENNEKRRPVVIHRAVLGSLDRFLAILIEHF 531

Query: 543 KGNLPLWLSPIQAIVTTITSSAVE-YAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            G  P W++P+Q  V  ++++  E YA  IA+ L    + +E D R+E + YKIRE  ++
Sbjct: 532 GGAFPAWVAPVQVKVIPVSNAVHEQYANRIADKLAQAGIRVERDIRDEKLGYKIREAQMQ 591

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           K+P +++ GDKE    ++ +R++G   ++ V L
Sbjct: 592 KVPYVLVIGDKEMESEAVNVRKYGEEKSEVVEL 624


>gi|226311191|ref|YP_002771085.1| threonyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
 gi|226094139|dbj|BAH42581.1| threonyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
          Length = 637

 Score =  577 bits (1488), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 280/626 (44%), Positives = 424/626 (67%), Gaps = 17/626 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDL-SDPVREGSIEI 61
           + I +TFPDG+++ +    T  D+A SIS SL KKAVA   +GKV DL ++   + +IEI
Sbjct: 2   AQIHVTFPDGAVRQYDAGITIEDIAGSISSSLKKKAVAGKKDGKVVDLYTELTDDAAIEI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           +T +    L V RHS AH++A+AV+ I+  EV+  IGP+IEDGFYYD D     S ++L 
Sbjct: 62  VTLDSADGLEVYRHSTAHLLAQAVKRIYGAEVKFGIGPVIEDGFYYDMDIPVSLSPEDLG 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IE +M++I+  D P  ++ +S E+A  +F+   +  K+E++  +P    +TLY QGE+F
Sbjct: 122 KIEAEMEKIVKEDLPIRRKVVSREEATAIFQELNDHLKLELIRDLPEDATITLYEQGEFF 181

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ STG +K F KLM VAGAYWRG +   +L R+YGTAW  + ++ +YL+F+EE
Sbjct: 182 DLCRGPHLPSTGFIKAF-KLMSVAGAYWRGKAENQVLQRVYGTAWPKKADMDEYLHFIEE 240

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQV 299
           ++KRDHRKL +E+ LF  +E+  G+ F+  KG+ +   L  + RR  +   Y E+ +P +
Sbjct: 241 AKKRDHRKLGKELGLFMFSEEAPGMPFYLPKGFTVRNELEQFSRRLQQLAQYTEVRSPFL 300

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           +++ LW++SGHWD Y+ NM+  +       D  T+ALKPMNCPGH+ ++ + + SYR+LP
Sbjct: 301 MNERLWKESGHWDHYKENMYFSEV------DNATYALKPMNCPGHMLIYKNEMHSYRDLP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R +EFG V+R+E SG+L+G++RVR F QDDAHVF   +Q+ +E   +  LI SIYK FG
Sbjct: 355 IRYSEFGQVHRHEYSGALNGMLRVRTFCQDDAHVFVRPDQIASEIKGMITLIDSIYKVFG 414

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           FE   V LSTRPE  +GSD LW+ AE+ +K VL+ +  + +      +  G+GAFYGPK 
Sbjct: 415 FE-YSVALSTRPEDSMGSDELWEAAESSLKTVLEELGMAYE------IKDGDGAFYGPKI 467

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           ++ + DA+ R  QCGTIQ+DF +P +F+  YV   +EK  PV++HRA++GS+ERFIGI+I
Sbjct: 468 DFQITDALKRRHQCGTIQLDFQMPEKFDLTYVGQDNEKHRPVVLHRAMYGSMERFIGILI 527

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E++ G  P+WL+PIQA +  I+   + YA+++   L+   + +E D RNE I YKIRE  
Sbjct: 528 EHYAGAFPIWLTPIQARIMNISEVHMPYAEQVREKLQQAGIRVELDGRNEKIGYKIREAQ 587

Query: 600 IKKIPIIIICGDKEASERSIGIRRFG 625
           ++KIP +++ G+KE ++ ++ +R+ G
Sbjct: 588 VEKIPYMLVIGEKEVADGTLSVRKRG 613


>gi|126640661|ref|YP_001083645.1| threonyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978]
          Length = 549

 Score =  577 bits (1488), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 273/554 (49%), Positives = 381/554 (68%), Gaps = 15/554 (2%)

Query: 94  VAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESK 153
           + IGP+IE+GFYYD    +PF+ D++A IE++M+++I +D   +K+    ++  ++F  +
Sbjct: 1   MVIGPVIEEGFYYDIWMPRPFTLDDMAAIEERMKKLIDQDYDVIKKMTPRDEVIKVFTDR 60

Query: 154 KEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSN 213
            E YK+ ++E +P ++ + LY   E+ D+CRGPHV +T  +K F KL K++GAYWRGD+ 
Sbjct: 61  GEEYKLRLVEDMPEEKAMGLYYHQEYVDMCRGPHVPNTKFLKSF-KLTKISGAYWRGDAK 119

Query: 214 RPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGW 273
              L RIYGTAW  +++L  Y+  +EE+EKRDHRK+ + +DLFH+ E+  G++FWH  GW
Sbjct: 120 NEQLQRIYGTAWADKKQLAAYIKRIEEAEKRDHRKIGKALDLFHMQEEAPGMVFWHANGW 179

Query: 274 KIFQTLISYMRRKIKDD-YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
            I+Q L  YMR+  +D+ Y+EI TPQ++D  LW++SGH  +Y  NMF       T  + R
Sbjct: 180 TIYQVLEQYMRKVQQDNGYQEIKTPQIVDFTLWEKSGHAANYAENMFT------THSESR 233

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
            +A+KPMNCP HV VFN GLKSYR+LP+RLAEFGS +RNEPSGSLHG+MRVRGFTQDDAH
Sbjct: 234 NYAVKPMNCPCHVQVFNQGLKSYRDLPIRLAEFGSCHRNEPSGSLHGIMRVRGFTQDDAH 293

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
           +FCTKEQ+  E      L + +YKDFGFE++ +KLSTRPEKRVG DALWD AE  +   L
Sbjct: 294 IFCTKEQIGKEVADFIKLTLDVYKDFGFEEVQMKLSTRPEKRVGDDALWDLAEKSLADAL 353

Query: 453 DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
           D         +   +  GEGAFYGPK E+ LKD +GR WQCGTIQ DFNLP R +A YV 
Sbjct: 354 DAAG------LEWELQPGEGAFYGPKIEFSLKDCLGRVWQCGTIQCDFNLPVRLDASYVT 407

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIA 572
             +E+  PVM+HRA+ GS ERFIGI+IE++ G +P WLSP+QA V  IT S  E ++++ 
Sbjct: 408 EENERDQPVMLHRAILGSFERFIGILIEHYAGFMPPWLSPVQACVMNITDSQAEASEQVV 467

Query: 573 NLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
             LK + L   +D RNE I +KIRE ++++IP +++ GD+E  E ++ +R         +
Sbjct: 468 AKLKENGLRAISDLRNEKIGFKIRERTLERIPYLLVLGDREVEEGTVNVRTRSGKNLGTM 527

Query: 633 SLLDAIPILTKESL 646
           S +DA   L K ++
Sbjct: 528 S-VDAFIDLVKSAV 540


>gi|297544949|ref|YP_003677251.1| threonyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|296842724|gb|ADH61240.1| threonyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 634

 Score =  577 bits (1487), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 291/640 (45%), Positives = 414/640 (64%), Gaps = 16/640 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPE 65
           LT  DG+ + F    T  ++A+SIS  LAK+AV    NGKV +L+  + E G +EI+T +
Sbjct: 3   LTLKDGTQREFEKGITVYEIAKSISERLAKEAVGGKFNGKVVELNTKIEEDGKLEILTFD 62

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D     +  H+ +HI+A+AV+ ++ +V++AIGP I++GFYYDFD ++PF++++   IE++
Sbjct: 63  DEEGKKIYWHTSSHILAQAVKRLFKDVKLAIGPAIDNGFYYDFDTDRPFTTEDFEAIEQE 122

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M +II  D    +  L  +KA +L E K E YKVE+++ IP  E ++ Y+QGE+ DLC G
Sbjct: 123 MNKIIKEDYKLERFVLPKDKAIKLMEGKGEPYKVELIKEIPEGEEISFYKQGEFTDLCAG 182

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PH+ STG VK   KL+ VAGAYW+GD    ML RIYG ++  +  L +YL+ LEE++KRD
Sbjct: 183 PHLMSTGMVKTI-KLLSVAGAYWKGDEKNKMLQRIYGISFPKKSMLDEYLHMLEEAKKRD 241

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHL 304
           HRKL +E+DLF I  +G G  F+H KG  I   L  + R++ +K  Y+EI TP +L++ L
Sbjct: 242 HRKLGKELDLFSIHPEGPGFPFFHPKGMIIRNILEDFWRKEHMKHGYQEIKTPIILNEEL 301

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHWD Y+ NM+  +       D  T+A+KPMNCPG + V+   + SYR+LP+RL E
Sbjct: 302 WRRSGHWDHYKENMYFTEI------DGETYAIKPMNCPGAMLVYKSTMHSYRDLPLRLCE 355

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
            G V+R+E SG LHGLMRVR FTQDDAH+F T EQ+ +E L + NL+   YK FGFE   
Sbjct: 356 LGLVHRHELSGVLHGLMRVRSFTQDDAHLFMTPEQVEDEILGVINLVDYFYKIFGFE-YF 414

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           V+LSTRPE  +GSD  W+ A N +   L+ +       +   V  G+GAFYGPK ++ LK
Sbjct: 415 VELSTRPENSMGSDEDWELATNALISALNRVN------LPYKVNEGDGAFYGPKIDFHLK 468

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D+IGR WQCGTIQ+DF +P RF   Y+    EK  P+M+HR ++GSIERFIGI+ E+F G
Sbjct: 469 DSIGRTWQCGTIQLDFQMPERFELEYIGPDGEKHRPIMLHRVIYGSIERFIGILTEHFAG 528

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P WL+P+Q  V  I+     YAQ +   L  + +  E D RNE + YKIRE  ++KIP
Sbjct: 529 AFPTWLAPVQVRVLPISDKHYAYAQNVYGRLLENDIRAELDDRNEKVGYKIREAQLQKIP 588

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            ++I GDKE  + ++ +R         +SL + I  + KE
Sbjct: 589 YMLIVGDKEVEQGTVSLRSRREGDLGAISLSEFIEKILKE 628


>gi|323704478|ref|ZP_08116056.1| threonyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum
           LX-11]
 gi|323535940|gb|EGB25713.1| threonyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum
           LX-11]
          Length = 634

 Score =  577 bits (1486), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 292/643 (45%), Positives = 414/643 (64%), Gaps = 23/643 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           +K+   DG+ + +    +  ++A+S+S+ LAK+A+   +NG++ +L  P+ E G +EI+T
Sbjct: 1   MKIILKDGTEREYESGISVYEIAKSLSQKLAKEALGGKLNGRIVELFTPINEDGKLEILT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D     +  H+ +HIMA+A++ ++  V++ IGP I++GFYYDFD ++PF+ D+ ++IE
Sbjct: 61  FDDEDGKKIYWHTSSHIMAQAIKRLYKNVKLTIGPAIDNGFYYDFDVDEPFTVDDFSKIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M +II  D    +  L  E+A +  E K E YKVE+++ +P    ++ YRQGE+ DLC
Sbjct: 121 DEMNKIIKEDLKLERFVLPREEAIKFMEEKGEPYKVELIKDLPQDATISFYRQGEFTDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+ STG VK   KL+ VAGAYWRGD    ML RIYG ++  +  L +YL  LEE++K
Sbjct: 181 AGPHLPSTGMVKSI-KLLSVAGAYWRGDERNKMLQRIYGISFPKKSMLDEYLNMLEEAKK 239

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQ 302
           RDHRKL +E+DLF I  +G G  F+H KG  +   L  + R++  K  Y+EI TP +L++
Sbjct: 240 RDHRKLGKELDLFSIHNEGPGFPFFHPKGMILRNILEDFWRKEHAKRGYQEIKTPIILNE 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW +SGHWD Y+ NM+  K  D+       +A+KPMNCPG + V+N  + SYR+LP+RL
Sbjct: 300 ELWHRSGHWDHYKENMYFTKIDDED------YAIKPMNCPGALLVYNSTMHSYRDLPLRL 353

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            E G V+R+E SG+LHGLMRVR FTQDDAH+F T +Q+ +E L +  LI   YK FGFE 
Sbjct: 354 CELGLVHRHELSGALHGLMRVRSFTQDDAHLFMTPDQVESEILGVIKLIDYFYKIFGFE- 412

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +GSD  W+ A N +      IK      +N  V  G+GAFYGPK ++ 
Sbjct: 413 YFVELSTRPENSIGSDEDWELATNAL------IKAMEHIGLNYKVNEGDGAFYGPKIDFH 466

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LKD+IGR WQCGTIQ+DF +P RFN  YV    EK  PVM+HR VFGSIERFI I+ ENF
Sbjct: 467 LKDSIGRTWQCGTIQLDFQMPERFNCEYVGDDGEKHRPVMLHRVVFGSIERFIAILTENF 526

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P+Q  +  I+   + YAQ I   L  + + +E D RNE I YKIRE  ++K
Sbjct: 527 AGAFPTWLAPVQVKILPISDKHLAYAQNIHERLLENDIRVELDDRNEKIGYKIREAQMQK 586

Query: 603 IPIIIICGDKEASERSIGIRR-----FGSTTTQKV--SLLDAI 638
           IP ++I GDKE    ++ +R       GS + Q+   S+L+ I
Sbjct: 587 IPYMLILGDKEVEAGNVSVRSRKEGDLGSKSLQEFLSSILEEI 629


>gi|291563461|emb|CBL42277.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase
           [butyrate-producing bacterium SS3/4]
          Length = 646

 Score =  577 bits (1486), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 286/623 (45%), Positives = 405/623 (65%), Gaps = 16/623 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K+T  DGS K +       D+A+ IS  LA+ A    I+G+  DL   V ++ ++ I T
Sbjct: 1   MKVTLKDGSFKEYAQPMAVIDIAKDISEGLARMACVAEIDGEAKDLRTIVDKDCTLNIFT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +DP  LA +RH+ +H+MA+A++ IWPE ++AIGP I DGFYYD D+++P +SD+LA+IE
Sbjct: 61  AKDPEGLAALRHTASHVMAQAIKRIWPETKLAIGPSIADGFYYDIDRDEPVTSDDLAKIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M++II    P  +  L   +A  L + K E YKVE++E +P    ++ Y+QGE+ DLC
Sbjct: 121 AEMKKIIKEALPLERFELPRAEAISLMKEKNEPYKVELIEDLPEDSIISFYKQGEFTDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+ +T +V K FKLM +AGAYWRG     ML+RIY TA+  +++L  Y+  +EE++K
Sbjct: 181 AGPHLMNTKEVGKAFKLMNIAGAYWRGSEKNKMLTRIYATAFAKKEDLDAYVTMMEEAKK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           RDHRKL +E+ LF +++ G G  F+  KG  +  TL+ Y R    K  Y EI+TP +L++
Sbjct: 241 RDHRKLGKELGLFMMSDAGPGFPFFLPKGMVLKNTLLDYWREIHKKAGYVEISTPIILNR 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHWD Y+ NM+       TI D   +A+KPMNCPG V V+    +SYR+LP+R+
Sbjct: 301 SLWETSGHWDHYKNNMYT------TIIDGEDYAIKPMNCPGGVLVYASEPRSYRDLPLRM 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            E G V+R+E SG LHGLMRVR FTQDDAH+F T EQ+ +E   +  LI  +Y  FGF K
Sbjct: 355 GELGIVHRHEKSGQLHGLMRVRCFTQDDAHIFMTPEQIRDEIKNVAGLINQVYSLFGF-K 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +GSD  W+ A + ++G LD +       ++  +  G+GAFYGPK ++ 
Sbjct: 414 YHVELSTRPEDSMGSDEDWELATSSLQGALDDLG------LDYVINEGDGAFYGPKIDFH 467

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L DAIGR WQCGTIQ+DF LP RF   Y+ +  EK  P+MIHR  FGSIERFIGI+IE+F
Sbjct: 468 LVDAIGRTWQCGTIQLDFQLPQRFELEYIGADGEKHRPIMIHRVCFGSIERFIGILIEHF 527

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P+Q  V  I+    EYA+ +   L +  +  E D R+E I YKIRE   +K
Sbjct: 528 AGAFPTWLAPVQVKVLPISEKYEEYAKSVKAALDAADIRAEIDLRSEKIGYKIREAQGQK 587

Query: 603 IPIIIICGDKEASERSIGIR-RF 624
           IP +++ G KE ++ ++ +R RF
Sbjct: 588 IPYMLVVGQKEQADGTVSVRSRF 610


>gi|228994292|ref|ZP_04154183.1| Threonyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
 gi|228765442|gb|EEM14105.1| Threonyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
          Length = 641

 Score =  577 bits (1486), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 286/643 (44%), Positives = 434/643 (67%), Gaps = 17/643 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I + FPDGS K++    T  ++A SIS SL KKAVA  +N ++ DL   + ++  I+IIT
Sbjct: 6   INIIFPDGSAKDYVKGITLEEIAASISSSLKKKAVAGKVNDQLFDLRRNIEQDAKIQIIT 65

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +    + V RH+ AHI+A+AV+ I+ +V++ +GP+IE+GFYYD D       ++L ++E
Sbjct: 66  MDSEEGIEVARHTSAHILAQAVKRIYGDVKLGVGPVIENGFYYDMDLPSSIGVEDLPKLE 125

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M+ I+  +    +  ++ ++A +LF+   +  K+E+LE+IP  E VT+Y+QGE+ DLC
Sbjct: 126 KEMKNIVNENLKIERVEITRKEAEKLFKDVNDHLKLELLEAIPENEIVTIYKQGEFVDLC 185

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG +K  F+L  V+GAYWRGDSN  +L RIYG A+++Q+EL  YL+F+EE+ K
Sbjct: 186 RGPHLPSTGYLKA-FQLTHVSGAYWRGDSNNQVLQRIYGVAFSSQKELESYLHFVEEAAK 244

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           R+HRKL  E++LF  +E+  G+ F+  KG  +   L S++R   ++ DY+E+ TP +++Q
Sbjct: 245 RNHRKLGNELELFMFSEEAPGMPFYLPKGQIVRNELESFLREIQQNYDYQEVRTPIMMNQ 304

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYR+LP+R+
Sbjct: 305 GLWEESGHWDHYKDNMYFSEV------DNKSFALKPMNCPGHMLIFKNKLHSYRDLPIRM 358

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG V+R+E SG+L+GL+RVR F QDDAH+F T EQ+ +E   +   I  +Y+ FGFE 
Sbjct: 359 CEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPEQIESEIKSVLKQIDYVYRTFGFE- 417

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +G D LW+ AE+ ++ VL ++  +   R+N     G+GAFYGPK ++ 
Sbjct: 418 YEVELSTRPEDSMGDDELWNQAESSLENVLKSLNYNY--RVNE----GDGAFYGPKIDFH 471

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+ R  QCGT+Q+DF +P +F+  Y++  +EK  PV+IHRAV GS +RF+GI+IE+F
Sbjct: 472 IKDALQRSHQCGTVQLDFQMPEKFDLNYIDERNEKRRPVVIHRAVLGSFDRFLGILIEHF 531

Query: 543 KGNLPLWLSPIQAIVTTITSSAVE-YAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            G  P WL+P+Q  V  +++   E Y +EI   LKS  L  E D R+E + YKIRE  ++
Sbjct: 532 GGAFPTWLAPVQIKVIPVSNQVHEQYTKEIEEKLKSVGLRAERDARSEKLGYKIREAQLQ 591

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIP I++ GDKE    S+ +R++G   ++ VSL   +  + KE
Sbjct: 592 KIPYILVIGDKEMENGSVNVRKYGEEKSEVVSLSAFMESIRKE 634


>gi|228921082|ref|ZP_04084417.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228838628|gb|EEM83934.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 640

 Score =  576 bits (1485), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 280/633 (44%), Positives = 435/633 (68%), Gaps = 17/633 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N  + DL   + E + +EIIT
Sbjct: 6   IEIKFPDGSVKEFVKGITLEEIAGSISSSLKKKAVAGKVNDGLYDLRRNIEENAEVEIIT 65

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +    + + RHS AHI+A+AV+ ++ ++ + +GP+IE+GFYYD D     + ++L +IE
Sbjct: 66  IDSNEGVEIARHSAAHILAQAVKRMYGDINLGVGPVIENGFYYDMDLPSSVNMEDLRKIE 125

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M++I   +    +  +S E+A +LF+   +  K+E+LE+IP+ E+VTLY+QGE+ DLC
Sbjct: 126 KEMKKITNENIKIERVEVSREEAAKLFQEMNDLLKLELLEAIPSGESVTLYKQGEFVDLC 185

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG +K  F+L  V+GAYWRGDSN  +L RIYG A+++Q+EL +YL+F+EE+ K
Sbjct: 186 RGPHLPSTGYLKA-FQLTHVSGAYWRGDSNNQVLQRIYGVAFSSQKELEEYLHFVEEAAK 244

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           R+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R   K+  Y+E+ TP +++Q
Sbjct: 245 RNHRKLGSELELFMFSEEAPGMPFYLPKGQMIRNELEAFLREIQKEYKYQEVRTPFMMNQ 304

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            +W++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R+
Sbjct: 305 EVWERSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIRM 358

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG V+R+E SG+L+GL+RVR F QDDAH+F T +Q+ +E   +   I  +YK FGFE 
Sbjct: 359 CEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPKQIEDEIKSVMAQIDYVYKTFGFE- 417

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +G D LW+ AE  ++ VL ++  + + R+N     G+GAFYGPK ++ 
Sbjct: 418 YEVELSTRPEDSMGDDKLWEQAEAALENVLQSL--NYKYRLNE----GDGAFYGPKIDFH 471

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+ R  QCGTIQ+DF +P +F+  Y++ ++EK  PV+IHRAV GS++RF+ I+IE+F
Sbjct: 472 IKDALNRSHQCGTIQLDFQMPEKFDLNYIDENNEKKRPVVIHRAVLGSLDRFLAILIEHF 531

Query: 543 KGNLPLWLSPIQAIVTTITSSAVE-YAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            G  P W++P+Q  V  ++++  E YA E+A+ L    + +E D R+E + YKIRE  ++
Sbjct: 532 GGAFPAWVAPVQVKVIPVSNAVHEQYASEVAHKLAQAGIRVEQDARDEKLGYKIREVQMQ 591

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           K+P +++ GDKE  + ++ +R++G   ++ V+L
Sbjct: 592 KVPYVLVIGDKEMEKGAVNVRKYGEEKSEVVAL 624


>gi|294793964|ref|ZP_06759101.1| threonine--tRNA ligase [Veillonella sp. 3_1_44]
 gi|294455534|gb|EFG23906.1| threonine--tRNA ligase [Veillonella sp. 3_1_44]
          Length = 636

 Score =  576 bits (1484), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 277/626 (44%), Positives = 404/626 (64%), Gaps = 16/626 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEI 61
           +D+K+  PDGS K +    T  +  + +S SLAKK +A  +NG++ DL + + +GS +  
Sbjct: 2   ADVKIILPDGSAKEYAAGTTLGEAVKQLSNSLAKKVLAANVNGELTDLREELVDGSEVAF 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +T ED      +RHS +HI+A+AV+ +WPE ++AIGP I+ GFYYD D E   + ++L +
Sbjct: 62  LTFEDEGGKHTLRHSASHILAQAVKRLWPEAKLAIGPAIDKGFYYDIDMEHILTPEDLGK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK+M  I+  + P  K  +  ++A E F++K E YKVE+++ +P    ++ Y QG++ D
Sbjct: 122 IEKEMSRIVKENLPITKSVMPRQEAIEFFKAKNEDYKVELIQDLPEDAVISCYSQGDFID 181

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LC GPHV STG+VK F KL  +AGAYWRGD    ML RIYGTA+  ++EL  YL+ LEE+
Sbjct: 182 LCAGPHVASTGKVKAF-KLQSIAGAYWRGDEKNKMLQRIYGTAFEKKEELDAYLHMLEEA 240

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
            KRDHRKL +E+ LF I E+G G  F+  KG  +   L ++ R    + +YEEI TP +L
Sbjct: 241 AKRDHRKLGKELGLFVIKEEGPGFPFFLPKGMALRNELENFWREVHHEFEYEEIRTPIIL 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ LW+ SGHW  YR NM+       TI D   +A+KPMNCPG + V+ + + SYR+ P+
Sbjct: 301 NKQLWETSGHWFHYRENMYT------TIIDEEEYAIKPMNCPGGILVYQNEMHSYRDFPL 354

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R AE G V+R+E SG+LHGL RVR FTQDDAHVF    QM +E +K+  L   IY  FG 
Sbjct: 355 RYAELGLVHRHELSGALHGLFRVRAFTQDDAHVFMLPSQMQSELMKVIELFDRIYSQFGL 414

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
            K  V+LST+P+  +G DA+W+ A   ++  ++         I   +  G+GAFYGPK +
Sbjct: 415 -KYHVELSTKPDNAMGDDAIWEAATEALRNAIEA------KGIPYVINPGDGAFYGPKLD 467

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           Y ++D++GR WQCGTIQ+D NLP RF   YV    +K  P+MIHRA FGS+ERFIGI+ E
Sbjct: 468 YHIEDSLGRTWQCGTIQLDMNLPERFQIEYVGEDGQKHRPIMIHRACFGSMERFIGILTE 527

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           ++ G  P W++P+Q  +  I+   VEYA+++A  +   ++ +E D R+E I YKIR+  +
Sbjct: 528 HYAGAFPTWMAPVQVKILPISEKHVEYAKDLAKQMHRDYVRVEVDDRSEKIGYKIRQAQM 587

Query: 601 KKIPIIIICGDKEASERSIGIRRFGS 626
            K+P +++ GDKE  E ++ +R+ G 
Sbjct: 588 AKVPYMLVVGDKEVEEGTVNVRKHGG 613


>gi|228933677|ref|ZP_04096525.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228826004|gb|EEM71789.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
          Length = 639

 Score =  576 bits (1484), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 280/633 (44%), Positives = 434/633 (68%), Gaps = 17/633 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N ++ DL   + E + +EIIT
Sbjct: 6   IEIKFPDGSVKEFVKGITLEEIAGSISSSLKKKAVAGNVNDELYDLRRNIEENAEVEIIT 65

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +    + + RHS AHI+A+AV+ ++ ++ + +GP+IE+GFYYD D     + ++L +IE
Sbjct: 66  IDSNEGVEIARHSAAHILAQAVKRLYGDINLGVGPVIENGFYYDMDLPSSVNVEDLRKIE 125

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M++II  +    +  +S E+A +LF+   +  K+E+LE+IP+ E+VTLY+QGE+ DLC
Sbjct: 126 KEMKKIINENIKVERVEVSREEAAKLFQEMNDRLKLELLEAIPSGESVTLYKQGEFVDLC 185

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG + K F+L  V+GAYWRG SN  +L RIYG A+++Q+EL +YL+F+EE+ K
Sbjct: 186 RGPHLPSTGYL-KVFQLTHVSGAYWRGYSNNQVLQRIYGVAFSSQKELEEYLHFVEEAAK 244

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           R+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R   K+ +Y+E+ TP +++Q
Sbjct: 245 RNHRKLGNELELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQ 304

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            +W++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R+
Sbjct: 305 EVWERSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIRM 358

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG V+R+E SG+L+GL+RVR F QDDAH+F T EQ+ +E   +   I  +YK FGF K
Sbjct: 359 CEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPEQIEDEIKSVMAQIDYVYKTFGF-K 417

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +G D LW+ AE  ++ VL ++  + + R+N     G+GAFYGPK ++ 
Sbjct: 418 YEVELSTRPEDSMGDDKLWEQAEASLENVLQSL--NYKYRLNE----GDGAFYGPKIDFH 471

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+ R  QCGTIQ+DF +P +F+  Y++  +EK  PV+IHRAV GS++RF+ I+IE+F
Sbjct: 472 IKDALNRSHQCGTIQLDFQMPEKFDLNYIDEKNEKKRPVVIHRAVLGSLDRFLAILIEHF 531

Query: 543 KGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            G  P W++P+Q  V  ++++  V+YA E+A+ L    + +E D R+E + YKIRE  ++
Sbjct: 532 GGAFPAWVAPVQVKVIPVSNAVHVQYADEVADKLAQAGVRVERDMRDEKLGYKIREAQMQ 591

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           K+P +++ GDKE    ++ +R++G   +  + L
Sbjct: 592 KVPYVLVIGDKEMENGAVNVRKYGEEKSDVIEL 624


>gi|229079560|ref|ZP_04212097.1| Threonyl-tRNA synthetase [Bacillus cereus Rock4-2]
 gi|228703729|gb|EEL56178.1| Threonyl-tRNA synthetase [Bacillus cereus Rock4-2]
          Length = 640

 Score =  576 bits (1484), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 280/633 (44%), Positives = 435/633 (68%), Gaps = 17/633 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N  + DL   + E + +EIIT
Sbjct: 6   IEIKFPDGSVKEFVNGVTLEEIAGSISSSLKKKAVAGKVNDGLYDLRRNIEENAEVEIIT 65

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +    + + RHS AHI+A+AV+ ++ ++ + +GP+IE+GFYYD D     + ++L +IE
Sbjct: 66  IDSNEGVEIARHSAAHILAQAVKRLYGDINLGVGPVIENGFYYDMDLPSSVNIEDLRKIE 125

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M++II  +    +  +S ++A +LF+   +  K+E+LE+IP+ E+VTLY+QGE+ DLC
Sbjct: 126 KEMKKIINENIKIERVEVSRKEAAKLFQEMNDRLKLELLEAIPSGESVTLYKQGEFVDLC 185

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG +K  F+L  V+GAYWRGDSN  +L RIYG A+++Q+EL +YL+F+EE+ K
Sbjct: 186 RGPHLPSTGYLKA-FQLTHVSGAYWRGDSNNQVLQRIYGVAFSSQKELEEYLHFVEEAAK 244

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           R+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R   K+  Y+E+ TP +++Q
Sbjct: 245 RNHRKLGSELELFMFSEEAPGMPFYLPKGQMIRNELEAFLREIQKEYKYQEVRTPFMMNQ 304

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            +W++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R+
Sbjct: 305 EVWERSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIRM 358

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG V+R+E SG+L+GL+RVR F QDDAH+F T +Q+ +E   +   I  +YK FGFE 
Sbjct: 359 CEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPKQIEDEIKSVMAQIDYVYKTFGFE- 417

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +G D LW+ AE  ++ VL ++  + + R+N     G+GAFYGPK ++ 
Sbjct: 418 YEVELSTRPEDSMGDDKLWEQAEAALENVLQSL--NYKYRLNE----GDGAFYGPKIDFH 471

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+ R  QCGTIQ+DF +P +F+  Y++ ++EK  PV+IHRAV GS++RF+ I+IE+F
Sbjct: 472 IKDALNRSHQCGTIQLDFQMPEKFDLNYIDENNEKKRPVVIHRAVLGSLDRFLAILIEHF 531

Query: 543 KGNLPLWLSPIQAIVTTITSSAVE-YAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            G  P W++P+Q  V  ++++  E YA EIA+ L    + +E D R+E + YKIRE  ++
Sbjct: 532 GGAFPAWVAPVQVKVIPVSNAVHEQYANEIAHKLAQAGVRVEQDARDEKLGYKIREAQMQ 591

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           K+P +++ GDKE    ++ +R++G   ++ ++L
Sbjct: 592 KVPYVLVIGDKEMENGAVNVRKYGEEKSEVIAL 624


>gi|225619668|ref|YP_002720925.1| threonyl-tRNA synthetase [Brachyspira hyodysenteriae WA1]
 gi|225214487|gb|ACN83221.1| threonyl-tRNA synthetase [Brachyspira hyodysenteriae WA1]
          Length = 643

 Score =  576 bits (1484), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 280/625 (44%), Positives = 412/625 (65%), Gaps = 18/625 (2%)

Query: 25  DVAESISRSLAKKAVAVAINGKVCDLS-DPVREGSIEIITPEDPRSLAVIRHSCAHIMAE 83
           D  +  ++  +K AVA   NG   DL+  P  +G +E+I       L ++RHS +H+MA+
Sbjct: 21  DFLKQNAKKDSKDAVAAKFNGTQVDLTYTPETDGDLELILTTSDDGLEILRHSTSHLMAQ 80

Query: 84  AVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSH 143
           AV+ ++P  QV IGP I+DGFYYDFD E+PF+ ++L +IE +M++II  + P +++ ++ 
Sbjct: 81  AVRRLYPNTQVTIGPAIKDGFYYDFDAEKPFTEEDLPKIEDEMKKIIKENIPVVRKVMNK 140

Query: 144 EKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKV 203
            +A E F+   E YKVEI+E I A + V+ Y QG++ DLCRGPHV STG +K + KLM V
Sbjct: 141 NEAIEYFKKANEPYKVEIIEGIDA-DTVSFYEQGDFIDLCRGPHVPSTGYLKAY-KLMSV 198

Query: 204 AGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGS 263
           AG+YWRGDSN  MLSRIYGTA+ +++ L +YL  L+E+++RDHRKL +E++LF   ++G 
Sbjct: 199 AGSYWRGDSNNKMLSRIYGTAFESKESLDKYLKKLKEAKERDHRKLGKELNLFSFHDEGP 258

Query: 264 GVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK 322
           G  FWH +G  I++ + SY+R +  K  Y EI TP +L++ LW +SGHWD+Y+ NM+  +
Sbjct: 259 GFPFWHPRGMIIYKAVESYIRNENDKRGYVEIKTPAILNEELWHRSGHWDNYKENMYFTE 318

Query: 323 CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMR 382
                  D   +A+KPMNCPG + V+N  + SYR+LP+R+AE G V+R+E SG+LHGL R
Sbjct: 319 I------DETKYAVKPMNCPGGLIVYNSNIHSYRDLPLRVAELGFVHRHELSGALHGLFR 372

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWD 442
           VR FTQDDAH+FCT+EQ+ +E +      +S+YKDFGFE   + +STRP K +GSD +W+
Sbjct: 373 VRAFTQDDAHIFCTEEQLGDEIINTIEYYLSVYKDFGFENFEIFVSTRPAKSIGSDEIWE 432

Query: 443 DAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNL 502
            A   +   LD +K S   +IN     G+GAFYGPK ++ +KD + R+WQCGT+QVDF+L
Sbjct: 433 LATKSLINALDKLKISY--KINE----GDGAFYGPKIDFNIKDVLDRNWQCGTLQVDFSL 486

Query: 503 PSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITS 562
           P RF   Y     +K  PVM+HRA+ GS+ERFIGI++E++ G  PLWLSP+Q  V  + +
Sbjct: 487 PMRFEISYEGKDGKKHTPVMLHRAILGSMERFIGILVEHYNGKFPLWLSPLQVAVVNVLN 546

Query: 563 SA--VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
               ++   E+A  LK     +E D  N+ +  KI+++ +++ P  +I G +E S   + 
Sbjct: 547 EKPQIDRTNEVAKALKDAGFRVEVDESNDNLGTKIKKYRLQRTPYTVIIGAEEVSSGKLS 606

Query: 621 IRRFGSTTTQKVSLLDAIPILTKES 645
           IR   S   + + L + I  L KES
Sbjct: 607 IRTRSSQEIKDMDLNEFIEKLKKES 631


>gi|30020454|ref|NP_832085.1| threonyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|229127762|ref|ZP_04256751.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|29896005|gb|AAP09286.1| Threonyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|228655839|gb|EEL11688.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
          Length = 640

 Score =  575 bits (1483), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 280/633 (44%), Positives = 434/633 (68%), Gaps = 17/633 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N  + DL   + E + +EIIT
Sbjct: 6   IEIKFPDGSVKEFVNGVTLEEIAGSISSSLKKKAVAGKVNDGLYDLRRNIEENAEVEIIT 65

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +    + + RHS AHI+A+AV+ ++ ++ + +GP+IE+GFYYD D     + ++L +IE
Sbjct: 66  IDSNEGVEITRHSAAHILAQAVKRMYGDINLGVGPVIENGFYYDMDLPSSVNVEDLRKIE 125

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M++II  +    +  +S E+A +LF+   +  K+E+LE+IP+ E+VTLY+QGE+ DLC
Sbjct: 126 KEMKKIINENIKIERVEVSREEAAKLFQEMNDRLKLELLEAIPSGESVTLYKQGEFVDLC 185

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+  TG +K  F+L  V+GAYWRGDSN  +L RIYG A+++Q+EL +YL+F+EE+ K
Sbjct: 186 RGPHLPFTGYLKA-FQLTHVSGAYWRGDSNNQVLQRIYGVAFSSQKELEEYLHFVEEAAK 244

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           R+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R   K+ +Y+E+ TP +++Q
Sbjct: 245 RNHRKLGSELELFMFSEEAPGMPFYLPKGQMIRNELEAFLREIQKEYNYQEVRTPFMMNQ 304

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            +W++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R+
Sbjct: 305 EVWERSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIRM 358

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG V+R+E SG+L+GL+RVR F QDDAH+F T +Q+ +E   +   I  +YK FGFE 
Sbjct: 359 CEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPKQIEDEIKSVMAQIDYVYKTFGFE- 417

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +G D LW+ AE  ++ VL ++  + + R+N     G+GAFYGPK ++ 
Sbjct: 418 YEVELSTRPEDSMGDDKLWEQAEAALENVLQSL--NYKYRLNE----GDGAFYGPKIDFH 471

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+ R  QCGTIQ+DF +P +F+  Y++ ++EK  PV+IHRAV GS++RF+ I+IE+F
Sbjct: 472 IKDALNRSHQCGTIQLDFQMPEKFDLNYIDENNEKKRPVVIHRAVLGSLDRFLAILIEHF 531

Query: 543 KGNLPLWLSPIQAIVTTITSSAVE-YAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            G  P W++P+Q  V  ++++  E YA EIA  L    + +E D R+E + YKIRE  ++
Sbjct: 532 GGAFPAWVAPVQVKVIPVSNAVHEQYANEIALKLAQAGVRVEQDARDEKLGYKIREAQMQ 591

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           K+P +++ GDKE    ++ +R++G   ++ ++L
Sbjct: 592 KVPYVLVIGDKEMENGAVNVRKYGEEKSEVIAL 624


>gi|313902061|ref|ZP_07835474.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Thermaerobacter
           subterraneus DSM 13965]
 gi|313467670|gb|EFR63171.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Thermaerobacter
           subterraneus DSM 13965]
          Length = 638

 Score =  575 bits (1483), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 282/642 (43%), Positives = 417/642 (64%), Gaps = 16/642 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           I +  P GS +  P   T  +VA+ I   LA+ AVA   NG+V DL+ P+ E G +EI+T
Sbjct: 2   IVVELPGGSRRELPRGITPLEVAQQIGPRLARDAVAARWNGQVIDLNRPLEEDGRLEILT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
             D     V RHS AH+MA+AV+ +WPE Q+A+GP +EDGF+YD    +P S+D+L  IE
Sbjct: 62  FADEAGREVYRHSTAHLMAQAVKRLWPEAQLAVGPPLEDGFFYDIQTPRPLSTDDLEAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           ++M  I+  D P  ++ +S ++A +LF  + E YKVEI+ESIP  E +T+Y QGE+ DLC
Sbjct: 122 QEMARIVQEDLPIRRRPVSRQEALDLFRQRGERYKVEIIESIPEDEPLTVYEQGEFVDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG++K F KL  VAGAYW+GD   PML+RIYGTA+ + +EL ++L  LEE+ +
Sbjct: 182 RGPHLPSTGRIKAF-KLTGVAGAYWKGDEKGPMLTRIYGTAFPSARELEEHLQRLEEARR 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           RDHRKL  E+DLFH  E   G  FWH KG  ++  L  + R  + +  Y+E+ TP++L  
Sbjct: 241 RDHRKLGPELDLFHFEEVAPGYAFWHPKGATVYGLLEQFSRELQARYGYQEVRTPEILKV 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW +SGHW+ YR NMF ++  D        F +KPMNCPGH  ++   ++SYR+LP+RL
Sbjct: 301 DLWHRSGHWEHYRDNMFLIEREDAL------FGVKPMNCPGHCLLYRSRIRSYRDLPLRL 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AE+G + R E SG+LHGL+RVRGF QDDAH+F  ++Q+  E  ++  L+ +IY  FG   
Sbjct: 355 AEYGRLARFERSGTLHGLLRVRGFEQDDAHLFVREDQIEEEIGRVLELVDTIYGTFGM-P 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             +KL+TRPEK +G  ALW+ AE  +   L+          +  +  G+GAFYGPK ++ 
Sbjct: 414 YEIKLATRPEKFMGDPALWERAEAALARALEAAGR------DYTLAPGDGAFYGPKLDFY 467

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           + D++GR WQ  T+Q+DF +P RF+  YV++  ++  PVMIHRA+ GS+ERFIGI+IE++
Sbjct: 468 VIDSLGRKWQTATVQLDFQMPIRFDLTYVDAAGQEQRPVMIHRAIMGSLERFIGILIEHY 527

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P+WL+P+Q  V  ++    +YA+ +   L++  L +E D R+E + YKIR+  ++K
Sbjct: 528 AGAFPVWLAPVQVRVLPVSDRHHDYARRVEERLRAAGLRVEVDARDEKLGYKIRQAQVEK 587

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P +++ GD+EA E  + +R          SL D + ++T++
Sbjct: 588 VPYMLVVGDREAQEGQVAVRSRDRGDLGSQSLEDFVRLITEK 629


>gi|222095974|ref|YP_002530031.1| threonyl-tRNA synthetase [Bacillus cereus Q1]
 gi|221240032|gb|ACM12742.1| threonine--tRNA ligase (threonyl-tRNA synthetase) [Bacillus cereus
           Q1]
          Length = 639

 Score =  575 bits (1483), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 281/633 (44%), Positives = 430/633 (67%), Gaps = 17/633 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N  + DL   +     +EIIT
Sbjct: 6   IEIKFPDGSVKEFVKGITLEEIAGSISNSLKKKAVAGKVNDGLYDLRRNIEGNAEVEIIT 65

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +    + + RHS AHI+A+A++ I+  V + +GP+IE+GFYYD D     + ++L +IE
Sbjct: 66  IDSNEGVEIARHSAAHILAQAIKRIYGNVNLGVGPVIENGFYYDMDLPSSVNVEDLRKIE 125

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M+ II  +    +  +S E+A +LF+   +  K+E+LE+IP++E+VTLY+QGE+ DLC
Sbjct: 126 IEMKNIIKENLKIERVEVSREEAAKLFQEMNDRLKLELLEAIPSEESVTLYKQGEFVDLC 185

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG +K  F+L  V+GAYWRGDSN  +L RIYG A+++Q+EL +YL+F+EE+ K
Sbjct: 186 RGPHLPSTGYLKA-FQLTHVSGAYWRGDSNNQVLQRIYGVAFSSQKELEEYLHFVEEAAK 244

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           R+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R   K+ +Y+E+ TP +++Q
Sbjct: 245 RNHRKLGSELELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQ 304

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            +W++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R+
Sbjct: 305 EVWERSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIRM 358

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG V+R+E SG+L+GL+RVR F QDDAH+F T EQ+ +E   +   I  +YK FGFE 
Sbjct: 359 CEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPEQIEDEIKSVMAQIDYVYKTFGFE- 417

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +G D LW+ AE  +  VL ++  + + R+N     G+GAFYGPK ++ 
Sbjct: 418 YEVELSTRPEDSMGDDKLWEQAEAALANVLHSL--NYKYRLNE----GDGAFYGPKIDFH 471

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+ R  QCGTIQ+DF +P +F+  Y++  +EK  PV+IHRAV GS++RF+ I+IE+F
Sbjct: 472 IKDALNRSHQCGTIQLDFQMPEKFDLNYIDEKNEKRRPVVIHRAVLGSLDRFLAILIEHF 531

Query: 543 KGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            G  P W++P+Q  +  ++++  V+YA EIA+ L    + +E D R+E + YKIRE  ++
Sbjct: 532 GGAFPAWVAPVQVKIIPVSNAVHVQYADEIADKLAQAGVRVERDVRDEKLGYKIREAQMQ 591

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           K+P +++ GDKE    ++ +R++G   ++ V L
Sbjct: 592 KVPYVLVIGDKEMENGAVNVRKYGEEKSEVVEL 624


>gi|269798232|ref|YP_003312132.1| threonyl-tRNA synthetase [Veillonella parvula DSM 2008]
 gi|269094861|gb|ACZ24852.1| threonyl-tRNA synthetase [Veillonella parvula DSM 2008]
          Length = 636

 Score =  575 bits (1482), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 276/626 (44%), Positives = 404/626 (64%), Gaps = 16/626 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEI 61
           +D+K+  PDGS K +    T  +  + +S SLAKK +A  +NG++ DL + + +GS +  
Sbjct: 2   ADVKIILPDGSAKEYAAGTTLGEAVKQLSNSLAKKVLAANVNGELTDLREELVDGSEVAF 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +T ED      +RH+ +HI+A+AV+ +WPE ++AIGP I+ GFYYD D E   + ++L +
Sbjct: 62  LTFEDEGGKHTLRHTASHILAQAVKRLWPEAKLAIGPAIDKGFYYDIDMEHILTPEDLGK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK+M  I+  + P  K  +  ++A E F++K E YKVE+++ +P    ++ Y QG++ D
Sbjct: 122 IEKEMSRIVKENLPITKSVMPRQEAIEFFKAKNEDYKVELIQDLPEDAVISCYSQGDFID 181

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LC GPHV STG+VK F KL  +AGAYWRGD    ML RIYGTA+  ++EL  YL+ LEE+
Sbjct: 182 LCAGPHVASTGKVKAF-KLQSIAGAYWRGDEKNKMLQRIYGTAFEKKEELDAYLHMLEEA 240

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
            KRDHRKL +E+ LF I E+G G  F+  KG  +   L ++ R    + +YEEI TP +L
Sbjct: 241 AKRDHRKLGKELGLFVIKEEGPGFPFFLPKGMALRNELENFWREVHHEFEYEEIRTPIIL 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ LW+ SGHW  YR NM+       TI D   +A+KPMNCPG + V+ + + SYR+ P+
Sbjct: 301 NKQLWETSGHWFHYRENMYT------TIIDEEEYAIKPMNCPGGILVYQNEMHSYRDFPL 354

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R AE G V+R+E SG+LHGL RVR FTQDDAHVF    QM +E +K+  L   IY  FG 
Sbjct: 355 RYAELGLVHRHELSGALHGLFRVRAFTQDDAHVFMLPSQMQSELMKVIELFDRIYSQFGL 414

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
            K  V+LST+P+  +G DA+W+ A   ++  ++         I   +  G+GAFYGPK +
Sbjct: 415 -KYHVELSTKPDNAMGDDAIWEAATEALRNAIEA------KGIPYVINPGDGAFYGPKLD 467

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           Y ++D++GR WQCGTIQ+D NLP RF   YV    +K  P+MIHRA FGS+ERFIGI+ E
Sbjct: 468 YHIEDSLGRTWQCGTIQLDMNLPERFQIEYVGEDGQKHRPIMIHRACFGSMERFIGILTE 527

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           ++ G  P W++P+Q  +  I+   VEYA+++A  +   ++ +E D R+E I YKIR+  +
Sbjct: 528 HYAGAFPTWMAPVQVKILPISEKHVEYAKDLAKQMHRDYVRVEVDDRSEKIGYKIRQAQM 587

Query: 601 KKIPIIIICGDKEASERSIGIRRFGS 626
            K+P +++ GDKE  E ++ +R+ G 
Sbjct: 588 AKVPYMLVVGDKEVEEGTVNVRKHGG 613


>gi|291279885|ref|YP_003496720.1| threonyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
 gi|290754587|dbj|BAI80964.1| threonyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
          Length = 640

 Score =  575 bits (1482), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 285/640 (44%), Positives = 422/640 (65%), Gaps = 16/640 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           +++  PDG++      A   +VA  IS +LAKKA+A  +NG + D+   + +G ++ IIT
Sbjct: 1   MRINLPDGNVIEVSDDADAKEVASKISNTLAKKAIAAEVNGNLVDIYYKLSDGDTVRIIT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +DP +L ++RHS AH+MA+AVQ ++ +V+V IGP+IEDGFYYDFDKE PF+  +L +IE
Sbjct: 61  EKDPEALEILRHSTAHLMAQAVQRLFKDVKVTIGPVIEDGFYYDFDKETPFTETDLEKIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           ++M++I   + P  ++ L  E+A +LF+ K E YK+EI+  I   E V++Y QGE+ DLC
Sbjct: 121 EEMKKIAQENLPIRRKELKKEEAIKLFKDKGEDYKIEIINEID-DEYVSVYEQGEFVDLC 179

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG++K F KL+ VAGAYWRGD N  ML RIYGT+W  + EL  YL  LEE++K
Sbjct: 180 RGPHLESTGKIKHF-KLLSVAGAYWRGDENNKMLQRIYGTSWFKKSELDDYLKRLEEAKK 238

Query: 244 RDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLD 301
           RDHRKL ++++LF   ++ G+G+I W  KG +I   + ++ + +  K+ YE + TP +  
Sbjct: 239 RDHRKLGKDLELFSTFDEIGAGLICWFPKGARIRSIIEAFWKEEHFKNGYEMLYTPHIGK 298

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             LW+ SGH   Y+ NM++    D        + +KPMNCP H+ ++   ++SYR+LP+R
Sbjct: 299 STLWETSGHLAFYQENMYSPMDIDGN-----EYFIKPMNCPFHIMIYKSKVRSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
            AE G+VYR E SG LHGL+RVRGFTQDDAH+ CT+EQ+ +E  ++ N  + ++K FGFE
Sbjct: 354 WAELGTVYRYERSGVLHGLLRVRGFTQDDAHIICTQEQIIDEIKEVLNFSLRMWKAFGFE 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            I   ++TRPEK VG DA+W+ A   ++G    IK+S    I+  +  G GAFYGPK + 
Sbjct: 414 SIKGYIATRPEKSVGDDAMWEKATQSLEG---AIKDSG---IDFEIDEGGGAFYGPKIDL 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDAIGR+WQ  TIQ DFNLP RF+  Y++   ++  P M+HRA+ GS+ERF G++IE+
Sbjct: 468 KIKDAIGREWQMTTIQFDFNLPERFDMTYIDKDGKEKRPFMVHRALLGSLERFFGVLIEH 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  P+WL+PIQ  +  ++ +  EY +EI   LK   + +E D RNE I YKIRE  ++
Sbjct: 528 YAGAFPIWLAPIQVRIINVSDAQYEYCKEIEKKLKEEGIRVEFDSRNEKIGYKIREAQLQ 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           KIP +II G+ E   +++ +R         +   + I +L
Sbjct: 588 KIPHMIIIGNNEVEAKTVSVRLRNGENKNNLDFYEYISVL 627


>gi|143764|gb|AAA22863.1| threonyl-tRNA synthetase (thrS2) (EC 6.1.1.3) [Bacillus subtilis]
          Length = 638

 Score =  575 bits (1482), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 282/634 (44%), Positives = 418/634 (65%), Gaps = 16/634 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSI 59
           M   + +  PDG I+ +P   T  + A SIS SL KKA A  +NGK+ DLS  + E   +
Sbjct: 1   MSKHVHIQLPDGQIQEYPKGITIKEAAGSISSSLQKKAAAGQVNGKLVDLSFKLEEDAEL 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            I+T +    L V+RH+ AH++A+AV+ ++ EV + +GP+I DGFYYD    +  +S +L
Sbjct: 61  SIVTLDSQEGLQVVRHTTAHVLAQAVKRLYGEVSLGVGPVILDGFYYDMKLGKSLASGDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEK+M+ II  +    +  +S+E+A ELF  K E  K+EIL+ IP  E++TLY+QGE+
Sbjct: 121 EAIEKEMKNIINENLEIKRIEVSYEEAEELFAQKDERLKLEILKDIPRGEDITLYQQGEF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPH+ STG +K F KL +V+GAYWRGDS   +L R+YG A+  +++L  +L+ LE
Sbjct: 181 VDLCRGPHLPSTGMIKAF-KLTRVSGAYWRGDSKNEVLQRVYGVAFQKKKDLDAHLHMLE 239

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+ KRDHRKL +++ LF  +E+  G+ F+  KG  +   L  + R  +    Y+E+ TP 
Sbjct: 240 EAAKRDHRKLGKQLGLFMFSEEAPGMPFYLPKGQIVRNELERFSRELQTNAGYDEVRTPF 299

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +++Q LW+QSGHWD YR NM+  +  DDT      FA+KPMNCPGH+ +F + L SYR+L
Sbjct: 300 MMNQRLWEQSGHWDHYRDNMYFSEV-DDT-----RFAMKPMNCPGHMLIFKNSLYSYRDL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG V+R+E SG+L+G++RVR F QDDAH+F  ++Q+ +E  +   LI  +Y+ F
Sbjct: 354 PIRMAEFGQVHRHEYSGALNGMLRVRTFCQDDAHIFVREDQIESEIKEAIRLIDEVYRTF 413

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE   V+LSTRPE  +G D+LW+ +E  +  VL+ +  S +  IN G    +GAFYGPK
Sbjct: 414 GFE-YSVELSTRPEDSLGDDSLWEASERALARVLEELGLSYE--INEG----DGAFYGPK 466

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++ +KDA+ R  QC TIQ+DF +P +F+  Y+N  +EK  PV+IHRAVFGSI+RF GI+
Sbjct: 467 IDFHIKDALKRSHQCATIQLDFQMPEKFDLTYINELNEKVRPVVIHRAVFGSIDRFFGIL 526

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE++ G  P+WL+PIQ  +  ++   ++Y +++   LK   +    D RNE + YKIRE 
Sbjct: 527 IEHYGGAFPVWLAPIQVQIIPVSHVHLDYCRKVQAELKQAGIRAGIDERNEKLGYKIRES 586

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
            ++KIP +++ GD E  E ++ +RRFG    + V
Sbjct: 587 QVQKIPYVLVLGDHEEQENAVNVRRFGHQQNEHV 620


>gi|218897336|ref|YP_002445747.1| threonyl-tRNA synthetase [Bacillus cereus G9842]
 gi|218542902|gb|ACK95296.1| threonyl-tRNA synthetase [Bacillus cereus G9842]
          Length = 640

 Score =  575 bits (1481), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 280/633 (44%), Positives = 435/633 (68%), Gaps = 17/633 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N  + DL   + E + +EIIT
Sbjct: 6   IEIKFPDGSVKEFVNGVTLEEIAGSISSSLKKKAVAGKVNDGLYDLRRNIEENAEVEIIT 65

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +    + + RHS AHI+A+AV+ ++ ++ + +GP+IE+GFYYD D     + ++L +IE
Sbjct: 66  IDSNEGVEIARHSAAHILAQAVKRLYGDINLGVGPVIENGFYYDMDLPSSVNIEDLRKIE 125

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M++II  +    +  +S E+A +LF+   ++ K+EILE+IP+ E+VTLY+QGE+ DLC
Sbjct: 126 KEMKKIINENIKIERVEVSREEAAKLFQEIDDSLKLEILEAIPSGESVTLYKQGEFVDLC 185

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG +K  F+L  V+GAYWRGDSN  +L RIYG A+++Q+EL +YL+F+EE+ K
Sbjct: 186 RGPHLPSTGYLKA-FQLTHVSGAYWRGDSNNQVLQRIYGVAFSSQKELEEYLHFVEEAAK 244

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           R+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R   K+ +Y+E+ TP +++Q
Sbjct: 245 RNHRKLGSELELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQ 304

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            +W++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R+
Sbjct: 305 EVWERSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIRM 358

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG V+R+E SG+L+GL+RVR F QDDAH+F T +Q+ +E   +   I  +YK FGFE 
Sbjct: 359 CEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPKQIEDEIKSVMAQIDYVYKTFGFE- 417

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +G D LW+ AE  ++ VL ++  + + R+N     G+GAFYGPK ++ 
Sbjct: 418 YEVELSTRPEDSMGDDKLWEQAEAALENVLQSL--NYKYRLNE----GDGAFYGPKIDFH 471

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+ R  QCGTIQ+DF +P +F+  Y++ +++K  PV+IHRAV GS++RF+ I+IE+F
Sbjct: 472 IKDALNRSHQCGTIQLDFQMPEKFDLNYIDENNDKKRPVVIHRAVLGSLDRFLAILIEHF 531

Query: 543 KGNLPLWLSPIQAIVTTITSSAVE-YAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            G  P W++P+Q  V  ++++  E Y  E+A+ L    + +E D R+E + YKIRE  ++
Sbjct: 532 GGAFPAWVAPVQVKVVPVSNAVHEQYCSEVAHKLAKAGVRVEQDARDEKLGYKIREAQMQ 591

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           K+P  ++ GDKE    ++ +R++G   ++ V+L
Sbjct: 592 KVPYFLVIGDKEMESGAVNVRKYGEEKSEVVAL 624


>gi|221311719|ref|ZP_03593566.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221316045|ref|ZP_03597850.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           NCIB 3610]
 gi|221320956|ref|ZP_03602250.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           JH642]
 gi|221325241|ref|ZP_03606535.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           SMY]
 gi|255767793|ref|NP_391636.2| threonyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|254763338|sp|P18256|SYT2_BACSU RecName: Full=Threonyl-tRNA synthetase 2; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|225185421|emb|CAB15783.2| threonyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
          Length = 638

 Score =  575 bits (1481), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 282/634 (44%), Positives = 418/634 (65%), Gaps = 16/634 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSI 59
           M   + +  PDG I+ +P   T  + A SIS SL KKA A  +NGK+ DLS  + E   +
Sbjct: 1   MSKHVHIQLPDGQIQEYPKGITIKEAAGSISSSLQKKAAAGQVNGKLVDLSFKLEEDAEL 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            I+T +    L V+RH+ AH++A+AV+ ++ EV + +GP+I DGFYYD    +  +S +L
Sbjct: 61  SIVTLDSQEGLQVLRHTTAHVLAQAVKRLYGEVSLGVGPVILDGFYYDMKLGKSLASGDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEK+M+ II  +    +  +S+E+A ELF  K E  K+EIL+ IP  E++TLY+QGE+
Sbjct: 121 EAIEKEMKNIINENLEIKRIEVSYEEAEELFAQKDERLKLEILKDIPRGEDITLYQQGEF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPH+ STG +K F KL +V+GAYWRGDS   +L R+YG A+  +++L  +L+ LE
Sbjct: 181 VDLCRGPHLPSTGMIKAF-KLTRVSGAYWRGDSKNEVLQRVYGVAFQKKKDLDAHLHMLE 239

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+ KRDHRKL +++ LF  +E+  G+ F+  KG  +   L  + R  +    Y+E+ TP 
Sbjct: 240 EAAKRDHRKLGKQLGLFMFSEEAPGMPFYLPKGQIVRNELERFSRELQTNAGYDEVRTPF 299

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +++Q LW+QSGHWD YR NM+  +  DDT      FA+KPMNCPGH+ +F + L SYR+L
Sbjct: 300 MMNQRLWEQSGHWDHYRDNMYFSEV-DDT-----RFAMKPMNCPGHMLIFKNSLYSYRDL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG V+R+E SG+L+G++RVR F QDDAH+F  ++Q+ +E  +   LI  +Y+ F
Sbjct: 354 PIRMAEFGQVHRHEYSGALNGMLRVRTFCQDDAHIFVREDQIESEIKEAIRLIDEVYRTF 413

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE   V+LSTRPE  +G D+LW+ +E  +  VL+ +  S +  IN G    +GAFYGPK
Sbjct: 414 GFE-YSVELSTRPEDSLGDDSLWEASERALARVLEELGLSYE--INEG----DGAFYGPK 466

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++ +KDA+ R  QC TIQ+DF +P +F+  Y+N  +EK  PV+IHRAVFGSI+RF GI+
Sbjct: 467 IDFHIKDALKRSHQCATIQLDFQMPEKFDLTYINELNEKVRPVVIHRAVFGSIDRFFGIL 526

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE++ G  P+WL+PIQ  +  ++   ++Y +++   LK   +    D RNE + YKIRE 
Sbjct: 527 IEHYGGAFPVWLAPIQVQIIPVSHVHLDYCRKVQAELKQAGIRAGIDERNEKLGYKIRES 586

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
            ++KIP +++ GD E  E ++ +RRFG    + V
Sbjct: 587 QVQKIPYVLVLGDHEEQENAVNVRRFGHQQNEHV 620


>gi|167037181|ref|YP_001664759.1| threonyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|320115599|ref|YP_004185758.1| threonyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
 gi|166856015|gb|ABY94423.1| threonyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|319928690|gb|ADV79375.1| threonyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
          Length = 634

 Score =  574 bits (1480), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 289/640 (45%), Positives = 413/640 (64%), Gaps = 16/640 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPE 65
           +   DG+ + F    T  ++A+SIS  LAK+AV    NGKV +L+  + E G +EI+T +
Sbjct: 3   IILKDGTQREFEKGMTVYEIAKSISERLAKEAVGGKFNGKVVELNTKIEEDGKLEILTFD 62

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D     +  H+ +HI+A+AV+ ++ +V++AIGP I++GFYYDFD ++PF++++   IE++
Sbjct: 63  DEEGKKIYWHTSSHILAQAVKRLFKDVKLAIGPAIDNGFYYDFDTDRPFTTEDFEAIEQE 122

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M +II  D    +  L  +KA +L E K E YKVE+++ IP  E ++ Y+QGE+ DLC G
Sbjct: 123 MNKIIKEDYKLERFVLPKDKAIKLMEGKGEPYKVELIKEIPEGEEISFYKQGEFTDLCAG 182

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PH+ STG VK   KL+ VAGAYW+GD    ML RIYG ++  +  L +YL+ LEE++KRD
Sbjct: 183 PHLMSTGMVKTI-KLLSVAGAYWKGDEKNKMLQRIYGISFPKKSMLDEYLHMLEEAKKRD 241

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHL 304
           HRKL +E+DLF I  +G G  F+H KG  I   L  + R++ +K  Y+EI TP +L++ L
Sbjct: 242 HRKLGKELDLFSIHPEGPGFPFFHPKGMIIRNILEDFWRKEHMKHGYQEIKTPIILNEEL 301

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHWD Y+ NM+  +       D  T+A+KPMNCPG + V+   + SYR+LP+RL E
Sbjct: 302 WRRSGHWDHYKENMYFTEI------DGETYAIKPMNCPGAMLVYKSTMHSYRDLPLRLCE 355

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
            G V+R+E SG LHGLMRVR FTQDDAH+F T EQ+ +E L + NL+   YK FGFE   
Sbjct: 356 LGLVHRHELSGVLHGLMRVRSFTQDDAHLFMTPEQVEDEILGVINLVDYFYKIFGFE-YF 414

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           V+LSTRPE  +GSD  W+ A N +   L+ +       +   V  G+GAFYGPK ++ LK
Sbjct: 415 VELSTRPENSMGSDEDWELATNALISALNRVN------LPYKVNEGDGAFYGPKIDFHLK 468

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D+IGR WQCGTIQ+DF +P RF   Y+    EK  P+M+HR ++GSIERFIGI+ E+F G
Sbjct: 469 DSIGRTWQCGTIQLDFQMPERFELEYIGPDGEKHRPIMLHRVIYGSIERFIGILTEHFAG 528

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P WL+P+Q  V  I+     YAQ +   L  + +  E D RNE + YKIRE  ++KIP
Sbjct: 529 AFPTWLAPVQVRVLPISDKHYAYAQNVYGRLLENDIRAELDDRNEKVGYKIREAQLQKIP 588

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            ++I GDKE  + ++ +R         +SL + I  + KE
Sbjct: 589 YMLIVGDKEVEQGTVSLRSRKEGDLGAISLSEFIEKILKE 628


>gi|228900981|ref|ZP_04065194.1| Threonyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
 gi|228858679|gb|EEN03126.1| Threonyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
          Length = 640

 Score =  574 bits (1480), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 280/633 (44%), Positives = 435/633 (68%), Gaps = 17/633 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N  + DL   + E + +EIIT
Sbjct: 6   IEIKFPDGSVKEFVNGVTLEEIAGSISSSLKKKAVAGKVNDGLYDLRRNIEENAEVEIIT 65

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +    + + RHS AHI+A+AV+ ++ ++ + +GP+IE+GFYYD D     + ++L +IE
Sbjct: 66  IDSNEGVEIARHSAAHILAQAVKRLYGDINLGVGPVIENGFYYDMDLPSSVNIEDLRKIE 125

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M++II  +    +  +S E+A +LF+   ++ K+EILE+IP+ E+VTLY+QGE+ DLC
Sbjct: 126 KEMKKIINENIKIERVEVSREEAAKLFQEIDDSLKLEILEAIPSGESVTLYKQGEFVDLC 185

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG +K  F+L  V+GAYWRGDSN  +L RIYG A+++Q+EL +YL+F+EE+ K
Sbjct: 186 RGPHLPSTGYLKA-FQLTHVSGAYWRGDSNNQVLQRIYGVAFSSQKELEEYLHFVEEAAK 244

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           R+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R   K+ +Y+E+ TP +++Q
Sbjct: 245 RNHRKLGSELELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQ 304

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            +W++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R+
Sbjct: 305 EVWERSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIRM 358

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG V+R+E SG+L+GL+RVR F QDDAH+F T +Q+ +E   +   I  +YK FGFE 
Sbjct: 359 CEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPKQIEDEIKSVMAQIDYVYKTFGFE- 417

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +G D LW+ AE  ++ VL ++  + + R+N     G+GAFYGPK ++ 
Sbjct: 418 YEVELSTRPEDSMGDDKLWEQAEAALENVLQSL--NYKYRLNE----GDGAFYGPKIDFH 471

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+ R  QCGTIQ+DF +P +F+  Y++ +++K  PV+IHRAV GS++RF+ I+IE+F
Sbjct: 472 IKDALNRSHQCGTIQLDFQMPEKFDLNYIDENNDKKRPVVIHRAVLGSLDRFLAILIEHF 531

Query: 543 KGNLPLWLSPIQAIVTTITSSAVE-YAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            G  P W++P+Q  V  ++++  E Y  E+A+ L    + +E D R+E + YKIRE  ++
Sbjct: 532 GGAFPAWVAPVQVKVVPVSNAVHEQYCSEVAHKLAQAGVRVEQDARDEKLGYKIREAQMQ 591

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           K+P  ++ GDKE    ++ +R++G   ++ V+L
Sbjct: 592 KVPYFLVIGDKEMESGAVNVRKYGEEKSEVVAL 624


>gi|328951014|ref|YP_004368349.1| threonyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884]
 gi|328451338|gb|AEB12239.1| threonyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884]
          Length = 647

 Score =  574 bits (1479), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 280/631 (44%), Positives = 404/631 (64%), Gaps = 25/631 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           + +  PDG     P  AT  DVAE ISRSLAK+AV   +NG++ D+  P+ EG+ + IIT
Sbjct: 2   MTVRLPDGKPLELPQGATAKDVAERISRSLAKEAVGAIVNGELYDVFKPLPEGAEVRIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPE-------VQVAIGPIIEDGFYYDFDKEQPFSS 116
            +DP    + RH+ AH++A+AV+  + E       V++ +GP+IE+GFYYD D  +P S 
Sbjct: 62  RKDPEYQHLFRHTLAHVLAQAVKEFFQEKGYDPDAVKLGVGPVIENGFYYDIDAPEPISD 121

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
            +L  IEK+M  I+ R+ P  +  LS E+A   +  K + YK E+++ +P  E ++ Y Q
Sbjct: 122 SDLPAIEKRMHHILKRNLPLRRYVLSREEALARYRGK-DPYKTELIQDLPEDEEISFYEQ 180

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
             + DLCRGPHV STG++  FFKL  VAGAYWRGD  RPML R+YG A+ T++EL  YL+
Sbjct: 181 EGFTDLCRGPHVPSTGKIPPFFKLTHVAGAYWRGDETRPMLQRVYGVAFRTKEELDHYLW 240

Query: 237 FLEESEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEI 294
            LEE++KRDHRKL RE++LF I    G G+  W  KG  + + L+ +MR  +++  Y+ +
Sbjct: 241 QLEEAKKRDHRKLGRELELFLIDPMVGKGLPLWLPKGNTVRELLVQFMREEQLRRGYQLV 300

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
            TP V    L++ SGH+  Y  + F     +D       + LKPMNCP H+ ++    +S
Sbjct: 301 TTPHVGSLELYKTSGHYPYYADSQFPPIELED-----EAYLLKPMNCPHHIRIYAARPRS 355

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YRELP+RLAEFG+VYR E SG LHGL RVRGFTQDDAH+FCT EQ+  E L + +L + +
Sbjct: 356 YRELPLRLAEFGTVYRFEQSGELHGLTRVRGFTQDDAHIFCTPEQVKEEFLSVLDLTMHV 415

Query: 415 YKDFGFEKIMVKLSTR---PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
           ++  G E    ++  R    +K VG DA W  AE  ++   + +       +   V  G+
Sbjct: 416 FRTLGMENYRARIGVRDPSSDKYVGEDAKWALAERQIQEACEEVG------LAYTVEAGD 469

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
            AFYGPK +++++DA+GR+WQ GTIQVD+NLP RF+  YV    E   PVMIHRA FGS+
Sbjct: 470 AAFYGPKLDFVVRDALGREWQLGTIQVDYNLPERFDLTYVGPDGEPHRPVMIHRAPFGSL 529

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           ERFIGI+IE+F G  PLWL+P+Q +V  IT   + YA+E+A  L+   + +E D R+E +
Sbjct: 530 ERFIGILIEHFAGEFPLWLAPVQVVVVPITDRHLAYAREVAQALREAGIRVEVDTRSERM 589

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           N KIR+   +K+P+I++ GD+E ++R++ +R
Sbjct: 590 NAKIRDAETQKVPVILVVGDQEVAQRTVAVR 620


>gi|228965357|ref|ZP_04126449.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228794347|gb|EEM41861.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str.
           T04001]
          Length = 640

 Score =  574 bits (1479), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 279/633 (44%), Positives = 435/633 (68%), Gaps = 17/633 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N  + DL   + E + +EIIT
Sbjct: 6   IEIKFPDGSVKEFVNGVTLEEIAGSISSSLKKKAVAGKVNDGLYDLRRNIEENAEVEIIT 65

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +    + + RHS AHI+A+AV+ ++ ++ + +GP+IE+GFYYD D     + ++L +IE
Sbjct: 66  IDSNEGVEIARHSAAHILAQAVKRLYGDINLGVGPVIENGFYYDMDLPSSVNIEDLRKIE 125

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M++II  +    +  +S E+A +LF+   ++ K+E+LE+IP+ E+VTLY+QGE+ DLC
Sbjct: 126 KEMKKIINENIKIERVEVSREEAAKLFQEIDDSLKLELLEAIPSGESVTLYKQGEFVDLC 185

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG +K  F+L  V+GAYWRGDSN  +L RIYG A+++Q+EL +YL+F+EE+ K
Sbjct: 186 RGPHLPSTGYLKA-FQLTHVSGAYWRGDSNNQVLQRIYGVAFSSQKELEEYLHFVEEAAK 244

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           R+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R   K+ +Y+E+ TP +++Q
Sbjct: 245 RNHRKLGSELELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQ 304

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            +W++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R+
Sbjct: 305 EVWERSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIRM 358

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG V+R+E SG+L+GL+RVR F QDDAH+F T +Q+ +E   +   I  +YK FGFE 
Sbjct: 359 CEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPKQIEDEIKSVMAQIDYVYKTFGFE- 417

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +G D LW+ AE  ++ VL ++  + + R+N     G+GAFYGPK ++ 
Sbjct: 418 YEVELSTRPEDSMGDDKLWEQAEAALENVLQSL--NYKYRLNE----GDGAFYGPKIDFH 471

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+ R  QCGTIQ+DF +P +F+  Y++ +++K  PV+IHRAV GS++RF+ I+IE+F
Sbjct: 472 IKDALNRSHQCGTIQLDFQMPEKFDLNYIDENNDKKRPVVIHRAVLGSLDRFLAILIEHF 531

Query: 543 KGNLPLWLSPIQAIVTTITSSAVE-YAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            G  P W++P+Q  V  ++++  E Y  E+A+ L    + +E D R+E + YKIRE  ++
Sbjct: 532 GGAFPAWVAPVQVKVVPVSNAVHEQYCSEVAHKLAKAGVRVEQDARDEKLGYKIREAQMQ 591

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           K+P  ++ GDKE    ++ +R++G   ++ V+L
Sbjct: 592 KVPYFLVIGDKEMESGAVNVRKYGEEKSEVVAL 624


>gi|220928797|ref|YP_002505706.1| threonyl-tRNA synthetase [Clostridium cellulolyticum H10]
 gi|219999125|gb|ACL75726.1| threonyl-tRNA synthetase [Clostridium cellulolyticum H10]
          Length = 635

 Score =  574 bits (1479), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 285/620 (45%), Positives = 404/620 (65%), Gaps = 16/620 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I +T  DG++K +    T  +VAESIS  LA+ ++   ++GKV +L   + R+ S+ ++T
Sbjct: 2   ISITLKDGTVKEYQKGVTVLEVAESISAGLARVSLVGEVDGKVTELDFKLERDCSLNLLT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            ED       RH+ +H++A+AV+ ++P+ ++AIGP I+ GFYYDF++E+PFS +EL  IE
Sbjct: 62  FEDEGGRLAYRHTASHVLAQAVKRLYPDAKLAIGPAIDTGFYYDFEREKPFSIEELDSIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M++I+  D    +  L   +A +L E K E YK E++  +P  E ++ Y+QGE+ DLC
Sbjct: 122 KEMEKIVKEDLKLERFVLPRNEAIKLMEEKGEPYKAELIMDLPQGEEISFYKQGEFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+  TG++K   KL+ VAGAYWRG+    ML RIYGTA+  + +L +YL+ +EE++K
Sbjct: 182 AGPHLTGTGRLKAV-KLLSVAGAYWRGNEKNKMLQRIYGTAFPKKSQLDEYLFRIEEAKK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL RE+DLF I ++G G  F+  KG  +   L  Y R + K   Y+EI TP +L++
Sbjct: 241 RDHRKLGRELDLFDILDEGPGFPFFMPKGMVLRNLLEDYWRSEHKKAGYQEIKTPVILNK 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW +SGHWD+Y+ NM+ V        D +  A+KPMNCPG + VF   L SYR+LP R+
Sbjct: 301 ELWLRSGHWDNYKNNMYTVAI------DEQDCAIKPMNCPGGILVFKRKLHSYRDLPQRM 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            E G V+R+E SG+LHGLMRVR FTQDDAH+F T EQ+ +E   + NLI   Y  FGF K
Sbjct: 355 GELGLVHRHELSGALHGLMRVRCFTQDDAHIFMTPEQITDEVTGVINLIDDFYSVFGF-K 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPEK +GSD +W+ +   +K  LD      +  I   +  G+GAFYGPK ++ 
Sbjct: 414 YNVELSTRPEKSIGSDEMWELSTAGLKKALD------EKGIKYTINKGDGAFYGPKIDFH 467

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+D+IGR WQCGTIQ+D NLP RF+  Y+    EK  PVM+HR VFGSIERFI I+ E+F
Sbjct: 468 LEDSIGRTWQCGTIQLDMNLPERFDLSYIGPDGEKHRPVMVHRVVFGSIERFIAILTEHF 527

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WLSP+Q  +  +     +YA E+  LL++  + +E D RNE I YKIRE  + K
Sbjct: 528 AGAFPTWLSPVQVKILPLVDKHYDYAYEVKKLLEADDIRVEVDTRNEKIGYKIREAQMDK 587

Query: 603 IPIIIICGDKEASERSIGIR 622
            P +++ GDKE   R + +R
Sbjct: 588 TPYMLVIGDKELEGRLVSVR 607


>gi|300870146|ref|YP_003785017.1| threonyl-tRNA synthetase [Brachyspira pilosicoli 95/1000]
 gi|300687845|gb|ADK30516.1| threonyl-tRNA synthetase [Brachyspira pilosicoli 95/1000]
          Length = 643

 Score =  573 bits (1478), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 280/625 (44%), Positives = 412/625 (65%), Gaps = 18/625 (2%)

Query: 25  DVAESISRSLAKKAVAVAINGKVCDLS-DPVREGSIEIITPEDPRSLAVIRHSCAHIMAE 83
           D  +  ++  +K AVA   NG   DL+  P  +G +E+I       L ++RHS +H+MA+
Sbjct: 21  DFLKQNAKKDSKDAVAAKFNGTQVDLTYTPETDGDLELILTTSDEGLEILRHSTSHLMAQ 80

Query: 84  AVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSH 143
           AV+ ++P  QV IGP I+DGFYYDFD E+PF+ ++L +IE +M++I+  + P +++ +  
Sbjct: 81  AVRRLYPNTQVTIGPAIKDGFYYDFDAEKPFTEEDLPKIEDEMKKIVKENIPVVRKVMKK 140

Query: 144 EKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKV 203
           ++A E F+   E YKVEI+E I A + V+ Y QG++ DLCRGPHV STG +K + KLM V
Sbjct: 141 DEAIEYFKKANEPYKVEIIEGIDA-DTVSFYEQGDFIDLCRGPHVPSTGYIKSY-KLMSV 198

Query: 204 AGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGS 263
           AG+YWRGDSN  MLSRIYGTA+ +++ L +YL  L+E+++RDHRKL +E++LF   ++G 
Sbjct: 199 AGSYWRGDSNNKMLSRIYGTAFESKEALDKYLKKLKEAKERDHRKLGKELNLFSFHDEGP 258

Query: 264 GVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK 322
           G  FWH  G  I++ + SY+R +  K  Y EI TP +L++ LW +SGHWD+Y+ NM+  +
Sbjct: 259 GFPFWHPNGMIIYKAVESYIRNENDKRGYVEIKTPAILNEELWHRSGHWDNYKENMYFTE 318

Query: 323 CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMR 382
             DDT      +A+KPMNCPG + V+N  + SYR+LP+R+AE G V+R+E SG+LHGL R
Sbjct: 319 I-DDT-----KYAVKPMNCPGGLIVYNSNIHSYRDLPLRVAELGFVHRHELSGALHGLFR 372

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWD 442
           VR FTQDDAH+FCT+EQ+ +E +      +S+YKDFGF+   + +STRP K +GSD +W+
Sbjct: 373 VRAFTQDDAHIFCTEEQLGDEIINTIEYYLSVYKDFGFKDFEIFVSTRPAKSIGSDEIWE 432

Query: 443 DAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNL 502
            A   +   LD +       I+  V  G+GAFYGPK ++ +KD + R+WQCGT+QVDF+L
Sbjct: 433 LATKSLMNALDKLG------ISYKVNEGDGAFYGPKIDFNIKDVLDRNWQCGTLQVDFSL 486

Query: 503 PSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQ-AIVTTIT 561
           P RF   Y     +K  PVM+HRA+ GS+ERFIGI++E++ G  PLWLSPIQ A+V  + 
Sbjct: 487 PMRFEISYEGKDGKKHTPVMLHRAILGSMERFIGILVEHYNGKFPLWLSPIQVAVVNVLN 546

Query: 562 SSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
             A +    E+A  LK     +E D  N+ +  KI+++ +++ P  +I G +E S   + 
Sbjct: 547 EEAQINRVHEVAKKLKEAGFRVEIDESNDNLGTKIKKYRLQRTPYTVIIGAEEVSNGKLS 606

Query: 621 IRRFGSTTTQKVSLLDAIPILTKES 645
           IR   S   + + L + +  L KES
Sbjct: 607 IRTRSSQEIKDMDLTEFMEKLQKES 631


>gi|228939521|ref|ZP_04102109.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228972374|ref|ZP_04132985.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228978988|ref|ZP_04139352.1| Threonyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228780699|gb|EEM28913.1| Threonyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228787391|gb|EEM35359.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228820221|gb|EEM66258.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|326940068|gb|AEA15964.1| threonyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 640

 Score =  573 bits (1478), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 279/633 (44%), Positives = 434/633 (68%), Gaps = 17/633 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N  + DL   + E + +EIIT
Sbjct: 6   IEIKFPDGSVKEFGKGITLEEIAGSISSSLKKKAVAGKVNDGLYDLRRNIEENAEVEIIT 65

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +    + + RHS AHI+A++V+ ++ ++ + +GP+IE+GFYYD D     + ++L +IE
Sbjct: 66  IDSNEGVEIARHSAAHILAQSVKRMYGDINLGVGPVIENGFYYDMDFPSSVNVEDLRKIE 125

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M++II  +    +  +S E+A +LF+   +  K+E+LE+IP+ E+VTLY+QGE+ DLC
Sbjct: 126 KEMKKIINENIKIERVEVSREEAAKLFQEMNDRLKLELLEAIPSGESVTLYKQGEFVDLC 185

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG +K  F+L  V+GAYWRGDSN  +L RIYG A+++Q+EL +YL+F+EE+ K
Sbjct: 186 RGPHLPSTGYLKA-FQLTHVSGAYWRGDSNNQVLQRIYGVAFSSQKELEEYLHFVEEAAK 244

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           R+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R   K+ +Y+E+ TP +++Q
Sbjct: 245 RNHRKLGNELELFMFSEEAPGMPFYLPKGQMIRNELEAFLREIQKEYNYQEVRTPFMMNQ 304

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            +W++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R+
Sbjct: 305 EVWEKSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIRM 358

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG V+R+E SG+L+GL+RVR F QDDAH+F T +Q+ +E   +   I  +YK FGFE 
Sbjct: 359 CEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPKQIEDEIKSVMAQIDYVYKTFGFE- 417

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +G D LW+ AE  ++ VL ++  + + R+N     G+GAFYGPK ++ 
Sbjct: 418 YEVELSTRPEDSMGDDKLWEQAEAALENVLQSL--NYKYRLNE----GDGAFYGPKIDFH 471

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+ R  QCGTIQ+DF +P +F+  Y++ +++K  PV+IHRAV GS++RF+ I+IE+F
Sbjct: 472 IKDALNRSHQCGTIQLDFQMPEKFDLNYIDENNDKKRPVVIHRAVLGSLDRFLAILIEHF 531

Query: 543 KGNLPLWLSPIQAIVTTITSSAVE-YAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            G  P W++P+Q  V  ++++  E YA EI   L    + +E D R+E + YKIRE  ++
Sbjct: 532 GGAFPAWVAPVQVKVIPVSNAVHEQYANEITLKLAQAGVRVEQDARDEKLGYKIREAQMQ 591

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           K+P +++ GDKE    ++ +R++G   ++ V+L
Sbjct: 592 KVPYVLVIGDKEMENGAVNVRKYGEEKSEVVAL 624


>gi|289578715|ref|YP_003477342.1| threonyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
 gi|289528428|gb|ADD02780.1| threonyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
          Length = 635

 Score =  573 bits (1478), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 292/641 (45%), Positives = 414/641 (64%), Gaps = 17/641 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPE 65
           LT  DG+ + F    T  ++A+SIS  LAK+AV    NGKV +L+  + E G +EI+T +
Sbjct: 3   LTLKDGTQREFEKGMTVYEIAKSISERLAKEAVGGKFNGKVVELNTKIEEDGKLEILTFD 62

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D     +  H+ +HI+A+AV+ ++ +V++AIGP I++GFYYDFD ++PF++++   IE++
Sbjct: 63  DEEGKKIYWHTSSHILAQAVKRLFKDVKLAIGPAIDNGFYYDFDTDRPFTTEDFEAIEQE 122

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M +II  D    +  L  ++A +L E K E YKVE+++ IP  E ++ Y+QGE+ DLC G
Sbjct: 123 MNKIIKEDYKLERFVLPKDEAIKLMEEKDEPYKVELIKEIPEGEEISFYKQGEFTDLCAG 182

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PH+ STG VK   KL+ VAGAYW+GD    ML RIYG ++  +  L +YL+ LEE++KRD
Sbjct: 183 PHLMSTGMVKTI-KLLSVAGAYWKGDEKNKMLQRIYGISFPKKSMLDEYLHMLEEAKKRD 241

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHL 304
           HRKL +E+DLF I  +G G  F+H KG  I   L  + R++ +K  Y+EI TP +L++ L
Sbjct: 242 HRKLGKELDLFSIHPEGPGFPFFHPKGMIIRNILEDFWRKEHMKHGYQEIKTPIILNEEL 301

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHWD Y+ NM+  +       D  T+A+KPMNCPG + V+   + SYR+LP+RL E
Sbjct: 302 WRRSGHWDHYKENMYFTEI------DGETYAIKPMNCPGAMLVYKSTMHSYRDLPLRLCE 355

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
            G V+R+E SG LHGLMRVR FTQDDAH+F T EQ+ +E L + NL+   YK FGFE   
Sbjct: 356 LGLVHRHELSGVLHGLMRVRSFTQDDAHLFMTPEQVEDEILGVINLVDYFYKIFGFE-YF 414

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           V+LSTRPE  +GSD  W+ A N +   L+ +       +   V  G+GAFYGPK ++ LK
Sbjct: 415 VELSTRPENSMGSDEDWELATNALISALNRVN------LPYKVNEGDGAFYGPKIDFHLK 468

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D+IGR WQCGTIQ+DF +P RF   Y+    EK  P+M+HR ++GSIERFIGI+ E+F G
Sbjct: 469 DSIGRTWQCGTIQLDFQMPERFELEYIGPDGEKHRPIMLHRVIYGSIERFIGILTEHFAG 528

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI-KKI 603
             P WL+P+Q  V  I+     YAQ +   L  + +  E D RNE I YKIRE  + KKI
Sbjct: 529 AFPTWLAPVQVRVLPISDKHYAYAQNVYGRLLENDIRAELDDRNEKIGYKIREAQLQKKI 588

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P ++I GDKE  + ++ +R         +SL + I  + KE
Sbjct: 589 PYMLIVGDKEVEQGTVSLRSRKEGDLGAISLSEFIEKILKE 629


>gi|258404181|ref|YP_003196923.1| threonyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
 gi|257796408|gb|ACV67345.1| threonyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
          Length = 649

 Score =  573 bits (1477), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 285/635 (44%), Positives = 411/635 (64%), Gaps = 23/635 (3%)

Query: 22  TGSDVAESISRSLAKKAVAVAINGK----VCDLSDPVREGSIEI--ITPEDPRSLAVIRH 75
           +G   AE+++++++KK +   + GK    V DL DPV EG  E+  +  E P  LAVIRH
Sbjct: 14  SGQSCAEALAQAVSKKKMKQVVAGKCGETVLDLRDPVPEGCSELEPVFAESPEGLAVIRH 73

Query: 76  SCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSP 135
           S AH+MAEAV+S++P  +V IGP IEDGFYYDFD E+ F+ ++L  IEK+M++ +  D P
Sbjct: 74  STAHVMAEAVKSLFPTAKVTIGPDIEDGFYYDFDFERSFTPEDLEAIEKEMEKSVGADMP 133

Query: 136 FLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVK 195
           F ++ +S ++A++ F  + E+YK+E+LE + A + VTLY    + DLCRGPHV STG + 
Sbjct: 134 FERREVSVDEAKKFFLHQNESYKIELLEEMDA-DRVTLYTHNGFTDLCRGPHVPSTGYLS 192

Query: 196 KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDL 255
            F KLMKVAGAYWRGD NR ML RIYGTAW   ++L  YL  LEE++KRDHRKL  ++DL
Sbjct: 193 AF-KLMKVAGAYWRGDENRTMLQRIYGTAWARPKDLKNYLQQLEEAKKRDHRKLGAQLDL 251

Query: 256 FHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDS 313
           F  +E+ G G+  WH KG  I   L  + R++ ++  Y+ +  P +L Q LWQ+SGH+D+
Sbjct: 252 FSFSEEAGPGMPLWHPKGALIRTILEDFSRKEHLRRGYQLVQGPTLLRQELWQRSGHYDN 311

Query: 314 YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP 373
           YR NM+  +  D      + + +KPMNC  H+ ++N  ++SYR+LP+R  E G+V+R+E 
Sbjct: 312 YRENMYFTEIDD------QAYGIKPMNCLAHMLIYNTKIRSYRDLPIRYFELGTVHRHEK 365

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
           SG LHGL+RVR FTQDDAH+ C  +Q+ +E  KI   +  +   FGF+   V++STRPEK
Sbjct: 366 SGVLHGLLRVRQFTQDDAHILCRPDQLQDEISKIVRFVQDVLGLFGFD-YEVEISTRPEK 424

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
            +GSD  WD A + +   LD +       +  G+  G+GAFYGPK +  LKDA+GR WQC
Sbjct: 425 SIGSDDAWDRATDALTKALDELG------VEYGICAGDGAFYGPKIDMKLKDALGRKWQC 478

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI 553
            TIQ DF LP RF+  YV    ++  PVM+HRA+ G+IERF+G+++E++ G LP WL P 
Sbjct: 479 TTIQCDFTLPERFDLVYVGQDGQRHRPVMLHRAMLGAIERFLGVLLEHYAGALPTWLMPE 538

Query: 554 QAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
           QA V  IT    EYAQ+  + L++  +  E D RNE + YK+RE  ++KIP +++ G++E
Sbjct: 539 QARVLNITDDHAEYAQQCVDQLRAAGIRAEADLRNEKLGYKVREAQMEKIPYVLVVGEQE 598

Query: 614 ASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
            +     +R  G      + + D I  +  + L P
Sbjct: 599 VATSGANLRLRGGKNIGVLPVDDIIDRIRHDCLEP 633


>gi|229161333|ref|ZP_04289318.1| Threonyl-tRNA synthetase [Bacillus cereus R309803]
 gi|228622147|gb|EEK78988.1| Threonyl-tRNA synthetase [Bacillus cereus R309803]
          Length = 639

 Score =  573 bits (1476), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 278/633 (43%), Positives = 430/633 (67%), Gaps = 17/633 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N ++ DL   + E + +EI+T
Sbjct: 6   IEIQFPDGSVKEFVKGITLEEIAGSISSSLKKKAVAGKVNEQLYDLRRNIEENAEVEIVT 65

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +    + + RHS AHI+A+AV+ ++  V + +GP+IE+GFYYD D     + ++L +IE
Sbjct: 66  IDSNEGVEIARHSAAHILAQAVKRMYGNVNLGVGPVIENGFYYDMDLPSSVNVEDLPKIE 125

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M++II+ +    +  +S E+A +LF+   +  K+E+LE+IP +E+VTLY+Q E+ DLC
Sbjct: 126 KEMKKIISENINIERVEVSREEAAKLFQEMNDGLKLELLEAIPNEESVTLYKQDEFVDLC 185

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG +K  F+L  V+GAYWRGDSN  +L RIYG A+++Q+ L +YL+F+EE+ K
Sbjct: 186 RGPHLPSTGYLKA-FQLTNVSGAYWRGDSNNQVLQRIYGVAFSSQKALEEYLHFVEEAAK 244

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           R+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R   K+ +Y+E+ TP +++Q
Sbjct: 245 RNHRKLGNELELFMFSEEAPGMPFYLPKGQIIRNELEAFLRGIQKEYNYQEVRTPFMMNQ 304

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R+
Sbjct: 305 ELWEKSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIRM 358

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG V+R+E SG+L+GL+RVR F QDDAH+F T EQ+ +E   +   I  +YK FGFE 
Sbjct: 359 CEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPEQIEDEIKSVMAQIDYVYKTFGFE- 417

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +G D LW+ AE  +  VL ++  + + R+N     G+GAFYGPK ++ 
Sbjct: 418 YEVELSTRPEDSMGDDKLWEQAEAALANVLHSL--NYKYRLNE----GDGAFYGPKIDFH 471

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+ R  QCGTIQ+DF +P +F+  Y++  +EK  PV+IHRAV GS++RF+ I+IE+F
Sbjct: 472 IKDALNRSHQCGTIQLDFQMPEKFDLNYIDEKNEKRRPVVIHRAVLGSLDRFLAILIEHF 531

Query: 543 KGNLPLWLSPIQAIVTTITSSAVE-YAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            G  P W++P+Q  V  +++   E YA E+ + L    + +E D R+E + YKIRE  ++
Sbjct: 532 GGAFPAWVAPVQVKVIPVSNVVHEQYANEVVDKLAQAGIRVEQDMRDEKLGYKIREAQMQ 591

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           K+P +++ GDKE   +++ +R++    ++ + L
Sbjct: 592 KVPYVLVIGDKEMESKAVNVRKYSEEQSEVIEL 624


>gi|228958638|ref|ZP_04120356.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228801059|gb|EEM47958.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
          Length = 640

 Score =  572 bits (1475), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 279/633 (44%), Positives = 432/633 (68%), Gaps = 17/633 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           I++ FPDGS+K F    T  ++A  IS SL KKAVA  +N  + DL   + E + +EIIT
Sbjct: 6   IEIKFPDGSVKEFVNGVTLEEIAGFISSSLKKKAVAGKVNDGLYDLRRKIEENAEVEIIT 65

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +    + + RHS AHI+A+AV+ ++ ++ + +GP+IE+GFYYD D     + ++L +IE
Sbjct: 66  IDSNEGVEIARHSAAHILAQAVKRLYSDINLGVGPVIENGFYYDMDLPSSVNVEDLRKIE 125

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M++II  +    +  +S E+A +LF+   +  K+E+LE+IP+ E+VTLY+QGE+ DLC
Sbjct: 126 KEMKKIINENIKIERVEVSREEAAKLFQEMNDRLKLELLEAIPSGESVTLYKQGEFVDLC 185

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+  TG +K  F+L  V+GAYWRGDSN  +L RIYG A+++Q+EL +YL+F+EE+ K
Sbjct: 186 RGPHLPFTGYLKA-FQLTHVSGAYWRGDSNNQVLQRIYGVAFSSQKELEEYLHFVEEAAK 244

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           R+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R   K+ +Y+E+ TP +++Q
Sbjct: 245 RNHRKLGSELELFMFSEEAPGMPFYLPKGQMIRNELEAFLREIQKEYNYQEVRTPFMMNQ 304

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            +W++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R+
Sbjct: 305 EVWERSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIRM 358

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG V+R+E SG+L+GL+RVR F QDDAH+F T +Q+ +E   +   I  +YK FGFE 
Sbjct: 359 CEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPKQIEDEIKSVMAQIDYVYKTFGFE- 417

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +G D LW+ AE  ++ VL ++  + + R+N     G+GAFYGPK ++ 
Sbjct: 418 YEVELSTRPEDSMGDDKLWEQAEAALENVLQSL--NYKYRLNE----GDGAFYGPKIDFH 471

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+ R  QCGTIQ+DF +P +F+  Y++ ++EK  PV+IHRAV GS++RF+ I+IE+F
Sbjct: 472 IKDALNRSHQCGTIQLDFQMPEKFDLNYIDENNEKKRPVVIHRAVLGSLDRFLAILIEHF 531

Query: 543 KGNLPLWLSPIQAIVTTITSSAVE-YAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            G  P W++P+Q  V  ++++  E YA EIA  L    + +E D R+E + YKIRE  ++
Sbjct: 532 GGAFPAWVAPVQVKVIPVSNAVHEQYANEIALKLAQAGVRVEQDARDEKLGYKIREAQMQ 591

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           K+P +++ GDKE    ++ +R++G   ++  +L
Sbjct: 592 KVPYVLVIGDKEMENGAVNVRKYGEEKSEVTAL 624


>gi|94676542|ref|YP_588910.1| threonyl-tRNA synthetase [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
 gi|123081480|sp|Q1LT04|SYT_BAUCH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|94219692|gb|ABF13851.1| threonyl-tRNA synthetase [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
          Length = 642

 Score =  572 bits (1474), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 269/627 (42%), Positives = 404/627 (64%), Gaps = 25/627 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPE 65
           +T  +G    F    +  ++A+ IS +  +  +A  +N ++ D  D + + S ++IIT E
Sbjct: 4   ITITNGLQLTFQKPVSSLEIAKYISSNCEQNCIASYLNNRLVDAVDLIMQDSKLDIITAE 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L ++R SC H++  A++ +WPE ++ IG II+ GFYYD D E     +++  +EK 
Sbjct: 64  DKAGLDILRCSCNHLLGHAIKQLWPEAKMTIGKIIDKGFYYDIDLEHKLQPEDIDALEKC 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE-SIPAKENVTLYRQGEWFDLCR 184
           M  +  ++   +K+Y+S ++ARE+F++  E YKV IL+ +I     V LY   E+ D+CR
Sbjct: 124 MHTLANKNYNIVKKYVSWQQAREIFQANGEIYKVAILDDNINQHTLVALYYYEEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPH  +  +    FKL K +  YWR +     L RIYGTAW T  +L  YL  L+E +KR
Sbjct: 184 GPHAPNI-RFCHHFKLQKTSITYWRNNDKNKKLQRIYGTAWGTDMQLKCYLQSLQEVKKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+HI E+  G++FWH  GW IF+ L +++R K++   Y+E+ +P ++D+ 
Sbjct: 243 DHRKIGQQLDLYHIQEEAPGMVFWHVDGWIIFRELETFIRSKLQTYKYQEVKSPVMIDRT 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+Q+GHW +Y  ++F       T  + R + +KPMNCPGHV +FN  + SYR+LP+R+A
Sbjct: 303 LWEQTGHWSNYAEHIFT------TSSENREYCIKPMNCPGHVQIFNQQINSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS YRNEPSGSLHGLMRVR FTQDDAH+FCT+EQ+ +E      ++  +Y  FGF+KI
Sbjct: 357 EFGSCYRNEPSGSLHGLMRVRNFTQDDAHIFCTEEQVCDEINNNIKMLYEVYHTFGFKKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL----LGEGAFYGPKF 479
           +V LSTRP  R+G+D +WD AE  +   L           N G+L    +G GAFYGPK 
Sbjct: 417 LVNLSTRPAHRIGNDKIWDKAEQDLATTL----------TNNGILFKYNVGAGAFYGPKI 466

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           E+ L D+  R WQCGTIQ+DF+LPSR  AFY+N ++++  PVMIHRA+ GS+ERFIGI+I
Sbjct: 467 EFTLLDSFDRAWQCGTIQLDFSLPSRLKAFYINKNNQRLVPVMIHRAILGSLERFIGILI 526

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E + G  P WL+P Q ++  I+ +   Y  ++   L + ++  + D RNE I +KIREH+
Sbjct: 527 EEYAGFFPTWLAPTQVVLMNISDNQSNYVIQLMQKLSTANIRAKIDLRNEKIGFKIREHT 586

Query: 600 IKKIPIIIICGDKEASERSIGIR-RFG 625
           ++++P ++ICGD+E     + IR R+G
Sbjct: 587 LRRVPYMLICGDQEIKMGKVTIRTRYG 613


>gi|304317243|ref|YP_003852388.1| threonyl-tRNA synthetase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302778745|gb|ADL69304.1| threonyl-tRNA synthetase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 634

 Score =  572 bits (1474), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 293/643 (45%), Positives = 412/643 (64%), Gaps = 23/643 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           +K+   DG+ K F       ++A+S+S+  AK+AV    NGK+ +L  P+ E G +EI+T
Sbjct: 1   MKIILKDGTEKEFENGKNVYEIAKSLSQRFAKEAVGGKFNGKIVELFTPINEDGKLEILT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D     +  H+ +HIMA+A++ ++ +V++ IGP I++GFYYDFD ++PF+ D+ ++IE
Sbjct: 61  FDDEDGKKIYWHTSSHIMAQAIKRLYKDVKLTIGPAIDNGFYYDFDVDEPFTVDDFSKIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           ++M +II  D    +  L  E+A +  + K E YKVE+++ +P    ++ YRQGE+ DLC
Sbjct: 121 EEMNKIIKEDLKLERFVLPREEAIKFMDEKGEPYKVELIKDLPEDAVISFYRQGEFTDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+ STG VK   KL+ VAGAYWRGD +  ML RIYG ++  +  L +YL  LEE++K
Sbjct: 181 AGPHLPSTGMVKSI-KLLSVAGAYWRGDEHNKMLQRIYGISFPKKSMLDEYLNMLEEAKK 239

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQ 302
           RDHRKL +E+DLF I  +G G  F+H KG  I   L  + R++  K  Y EI TP +L++
Sbjct: 240 RDHRKLGKELDLFSIHNEGPGFPFFHPKGMVIRNILEDFWRKEHAKRGYLEIKTPIILNE 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW +SGHWD Y+ NM+  K       D   +A+KPMNCPG + V+N  + SYR+LP+RL
Sbjct: 300 ELWHRSGHWDHYKENMYFTKI------DGEDYAIKPMNCPGALLVYNSTMHSYRDLPLRL 353

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            E G V+R+E SG+LHGLMRVR FTQDDAH+F T +Q+ +E L +  LI   YK FGF+ 
Sbjct: 354 CELGLVHRHELSGALHGLMRVRSFTQDDAHLFMTPDQVESEILGVIKLIDYFYKIFGFD- 412

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +GSD  W+ A N +      IK      ++  V  G+GAFYGPK ++ 
Sbjct: 413 YFVELSTRPENSIGSDEDWELATNAL------IKAMEHIGLDYKVNEGDGAFYGPKIDFH 466

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LKD+IGR WQCGTIQ+DF +P RFN  YV    EK  PVM+HR VFGSIERFI I+ ENF
Sbjct: 467 LKDSIGRTWQCGTIQLDFQMPERFNCEYVGQDGEKHRPVMLHRVVFGSIERFIAILTENF 526

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P+Q  +  I+   + YAQ I   L  + + +E D RNE I YKIRE  ++K
Sbjct: 527 AGAFPTWLAPVQVRILPISDKHLAYAQNIQQRLLENDIRVELDDRNEKIGYKIREAQMQK 586

Query: 603 IPIIIICGDKEASERSIGIRR-----FGSTTTQKV--SLLDAI 638
           IP ++I GDKE    ++ +R       GS + Q+   S+L+ I
Sbjct: 587 IPYMLILGDKEVESGNVSVRSRKDGDIGSKSMQEFLSSILEEI 629


>gi|114566616|ref|YP_753770.1| threonyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|122318333|sp|Q0AY05|SYT_SYNWW RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|114337551|gb|ABI68399.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Syntrophomonas
           wolfei subsp. wolfei str. Goettingen]
          Length = 635

 Score =  572 bits (1473), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 281/620 (45%), Positives = 405/620 (65%), Gaps = 16/620 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           I +   DGS + +P   +   VAE IS  LAK A+A   NGK+ DL+  V+E G +E++ 
Sbjct: 2   ISIRLKDGSQREYPEGISLLQVAEDISPKLAKNAMAAVFNGKISDLNSQVKEDGCLELLD 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            ED R+  V RHS AH+MA+AV+ +WPE ++AIGP I+ GFYYDFD    F+ ++ A IE
Sbjct: 62  FEDERAREVYRHSSAHVMAQAVKRLWPESKLAIGPAIDKGFYYDFDSGHTFTPEDFAAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           ++M+ II  D P +++ LS E+A + F  + E YK+E++E +P    ++ Y+QGE+ DLC
Sbjct: 122 EEMKRIIKADYPIVRKELSREEALQFFSERSEDYKLELIEDLPEDAVISTYQQGEFVDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+ STG++K   K+M +AGAYWRG    PML R+Y T++  +  L  YL  LEE++K
Sbjct: 182 AGPHLPSTGRLKAI-KVMSLAGAYWRGSERNPMLQRVYATSFPKKSMLDDYLQKLEEAKK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQ 302
           RDHR+L RE+ LF + ++G G  F+  KG  +   L ++ R +  K  Y+EI TP +L +
Sbjct: 241 RDHRRLGRELGLFVVLDEGPGFPFFLPKGMVLRNELENFWREEHRKAGYQEIRTPIILSR 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y+ NM+       T  D   +A+KPMNCPG + V+   L SY+ELP+R+
Sbjct: 301 ELWERSGHWDHYKDNMYF------TTIDEGDYAIKPMNCPGGLLVYKQNLHSYKELPLRM 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            E G V+R+E SG LHGLMRVR FTQDDAH+F   EQ+ +E   + +L+   Y  FGF  
Sbjct: 355 GEMGLVHRHEMSGVLHGLMRVRAFTQDDAHIFMLPEQIIDEIKGVMDLVDRFYSLFGF-P 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LST+PEK +GSD +W+ A N +      IK   +  +   V  G+GAFYGPK ++ 
Sbjct: 414 YHVELSTKPEKAMGSDEIWEVATNAL------IKALEERGMEYKVNEGDGAFYGPKIDFH 467

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+D++ R WQCGTIQ+DF +P +F+  YV     K  PVMIHR ++GSIERFIGI+ E+F
Sbjct: 468 LQDSLDRTWQCGTIQLDFQMPEKFDLTYVGEDGGKHRPVMIHRVIYGSIERFIGILTEHF 527

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  PLWL+P+Q  V  IT  + +YA+++   L+   + +E DFR+E I YKIRE  ++K
Sbjct: 528 GGAFPLWLAPVQVRVLPITQRSQDYARQVVAELEQAGIRVEADFRSEKIGYKIREGQLQK 587

Query: 603 IPIIIICGDKEASERSIGIR 622
           IP +++ GD+EA E ++ +R
Sbjct: 588 IPYLLVLGDREAEEGTVSVR 607


>gi|296327515|ref|ZP_06870061.1| threonine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
 gi|296155341|gb|EFG96112.1| threonine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
          Length = 637

 Score =  571 bits (1472), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 294/629 (46%), Positives = 412/629 (65%), Gaps = 19/629 (3%)

Query: 11  DGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRS 69
           +G  K +  +    ++A+ IS SLAKK+V   ++GK  D+S  +  +  +E I  + P  
Sbjct: 6   NGENKEYNNNINMFEIAKGISNSLAKKSVGAKVDGKNVDMSYILDHDAEVEFIDIDSPEG 65

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
             ++RHS AH+MA+AV  ++P+ +V IGP+IE+GFYYDFD  + F+ ++L +IE +M+ I
Sbjct: 66  EDIVRHSTAHLMAQAVLRLYPDTKVTIGPVIENGFYYDFDPVEQFTEEDLEKIEAEMKRI 125

Query: 130 IARDSPFLKQYLSHEKARELF-ESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           +  +    K  L  ++A E F +  K  YKVE++E IP  E V+ Y+QG++ DLCRG HV
Sbjct: 126 VKENIKLEKYVLPRDEAIEYFRDVDKNKYKVEVVEGIPQGEQVSFYKQGDFTDLCRGTHV 185

Query: 189 RSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRK 248
            STG +K F KL  VAGAYWRG+S   ML RIYG +++ ++ L  +L  +EE+EKRDHRK
Sbjct: 186 PSTGYLKAF-KLRTVAGAYWRGNSKNKMLQRIYGYSFSNEERLKHHLKLMEEAEKRDHRK 244

Query: 249 LAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQ 307
           L +E++LF ++E G G  F+  KG  +   LI   RR+  K  Y+++ TP +L++ LW+ 
Sbjct: 245 LGKELELFFLSEYGPGFPFFLPKGMIVRNVLIDLWRREHEKAGYQQLETPIMLNKELWEI 304

Query: 308 SGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGS 367
           SGHW +YR NM+  +       D   FA+KPMNCPG V  F H L SY++LP RLAE G 
Sbjct: 305 SGHWFNYRENMYTSEI------DELEFAIKPMNCPGGVLAFKHQLHSYKDLPARLAELGR 358

Query: 368 VYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY-KDFGFEKIMVK 426
           V+R+E SG+LHGLMRVR FTQDD+H+F T +Q+ +E + + NLI   Y K FGFE   ++
Sbjct: 359 VHRHEFSGALHGLMRVRSFTQDDSHIFMTPDQVQDEIIGVVNLIDKFYSKLFGFE-YEIE 417

Query: 427 LSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDA 486
           LST+PEK +GS  +WD AE  + G LD +    + +IN G    +GAFYGPK ++ +KDA
Sbjct: 418 LSTKPEKAIGSQEIWDMAEAALAGALDKL--GRKYKINPG----DGAFYGPKLDFKIKDA 471

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNL 546
           IGR WQCGTIQ+DFNLP RF+  Y+    EK  PVM+HR ++GSIERFIGI+IE++ G  
Sbjct: 472 IGRMWQCGTIQLDFNLPERFDVTYIGEDGEKHRPVMLHRVIYGSIERFIGILIEHYAGAF 531

Query: 547 PLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK-KIPI 605
           P+WL+P+Q  V T+    + YA+EI N L+   +  E D RNETI YKIRE + K KIP+
Sbjct: 532 PMWLAPVQVKVLTLNDECIPYAKEIMNKLEELGIRAELDDRNETIGYKIREANGKYKIPM 591

Query: 606 IIICGDKEASERSIGIRRFGSTTTQKVSL 634
            +I G  E   + + IRRFGS      SL
Sbjct: 592 QLIIGKNEVENKEVNIRRFGSKDQFSKSL 620


>gi|228908133|ref|ZP_04071981.1| Threonyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
 gi|228851551|gb|EEM96357.1| Threonyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
          Length = 640

 Score =  571 bits (1471), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 277/633 (43%), Positives = 434/633 (68%), Gaps = 17/633 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N  + DL   + E + +EIIT
Sbjct: 6   IEIKFPDGSVKEFGKGITLEEIAGSISSSLKKKAVAGKVNDGLYDLRGNIEENAEVEIIT 65

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +    + + RHS AHI+A+AV+ ++ ++ + +GP+IE+GFYYD D     + ++L +IE
Sbjct: 66  IDSNEGVEIARHSAAHILAQAVKRLYGDINLGVGPVIENGFYYDMDLPSSVNVEDLRKIE 125

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M++II  +    +  +S E+A +LF+   ++ K+E+LE+IP+ E+VTLY+QGE+ DLC
Sbjct: 126 KEMKKIINENIKIERVEVSREEAAKLFQEIDDSLKLELLEAIPSGESVTLYKQGEFVDLC 185

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG +K  F+L  V+GAYWRGDSN  +L RIYG A+++Q+EL +YL+F+EE+ K
Sbjct: 186 RGPHLPSTGYLKA-FQLTHVSGAYWRGDSNNQVLQRIYGVAFSSQKELEEYLHFVEEAAK 244

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           R+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R   K+ +Y+E+ TP +++Q
Sbjct: 245 RNHRKLGNELELFMFSEEAPGMPFYLPKGQMIRNELEAFLRGIQKEYNYQEVRTPFMMNQ 304

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            +W++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R+
Sbjct: 305 EVWERSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIRM 358

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG V+R+E SG+L+GL+RVR F QDDAH+F T +Q+ +E   +   I  +YK FGFE 
Sbjct: 359 CEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPKQIEDEIKSVMAQIDYVYKTFGFE- 417

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +G D LW+ AE  ++ VL ++  + + R+N     G+GAFYGPK ++ 
Sbjct: 418 YEVELSTRPEDSMGDDKLWEQAEAALENVLQSL--NYKYRLNE----GDGAFYGPKIDFH 471

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+ R  QCGTIQ+DF +P +F+  Y++ +++K  PV+IHRAV GS++RF+ I+IE+F
Sbjct: 472 IKDALNRSHQCGTIQLDFQMPEKFDLNYIDENNDKKRPVVIHRAVLGSLDRFLAILIEHF 531

Query: 543 KGNLPLWLSPIQAIVTTITSSAVE-YAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            G  P W++P+Q  V  ++++  E Y  E+A+ L    + +E D R+E + YKIRE  ++
Sbjct: 532 GGAFPAWVAPVQVKVIPVSNAVHEQYCSEVAHKLAQAGVRVEQDARDEKLGYKIREAQMQ 591

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           K+P +++ GDKE    ++ +R++    ++ V +
Sbjct: 592 KVPYVLVIGDKEMESGAVNVRKYAEEKSEVVEI 624


>gi|19703946|ref|NP_603508.1| threonyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|22654111|sp|Q8RFS6|SYT_FUSNN RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|19714122|gb|AAL94807.1| Threonyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
          Length = 620

 Score =  571 bits (1471), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 294/617 (47%), Positives = 409/617 (66%), Gaps = 20/617 (3%)

Query: 25  DVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIRHSCAHIMAE 83
           ++A+ IS SLAKK+V   ++GK  D+S  +  +  +E I  + P    ++RHS AH+MA+
Sbjct: 3   EIAKGISNSLAKKSVGAKVDGKNVDMSYILDHDAEVEFIDIDSPEGEDIVRHSTAHLMAQ 62

Query: 84  AVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSH 143
           AV  ++P+ +V IGP+IE+GFYYDFD  + F+ ++L +IE +M+ I+  +    K  L  
Sbjct: 63  AVLRLYPDTKVTIGPVIENGFYYDFDPVEQFTEEDLEKIEAEMKRIVKENIKLEKYVLPR 122

Query: 144 EKARELF-ESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMK 202
           ++A E F +  K  YKVE++E IP  E V+ Y+QG++ DLCRG HV STG +K F KL  
Sbjct: 123 DEAIEYFRDVDKNKYKVEVVEGIPQGEQVSFYKQGDFTDLCRGTHVPSTGYLKAF-KLRT 181

Query: 203 VAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDG 262
           VAGAYWRG+S   ML RIYG +++ ++ L  +L  +EE+EKRDHRKL +E++LF ++E G
Sbjct: 182 VAGAYWRGNSKNKMLQRIYGYSFSNEERLKHHLKLMEEAEKRDHRKLGKELELFFLSEYG 241

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
            G  F+  KG  +   LI   RR+  K  Y+++ TP +L++ LW+ SGHW +YR NM+  
Sbjct: 242 PGFPFFLPKGMIVRNVLIDLWRREHEKAGYQQLETPIMLNKELWEISGHWFNYRENMYTS 301

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           +       D   FA+KPMNCPG V  F H L SY++LP RLAE G V+R+E SG+LHGLM
Sbjct: 302 EI------DELEFAIKPMNCPGGVLAFKHQLHSYKDLPARLAELGRVHRHEFSGALHGLM 355

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY-KDFGFEKIMVKLSTRPEKRVGSDAL 440
           RVR FTQDD+H+F T +Q+ +E + + NLI   Y K FGFE   ++LST+PEK +GS  +
Sbjct: 356 RVRSFTQDDSHIFMTPDQVQDEIIGVVNLIDKFYSKLFGFE-YEIELSTKPEKAIGSQEI 414

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDF 500
           WD AE  + G LD +    + +IN G    +GAFYGPK ++ +KDAIGR WQCGTIQ+DF
Sbjct: 415 WDMAEAALAGALDKL--GRKYKINPG----DGAFYGPKLDFKIKDAIGRMWQCGTIQLDF 468

Query: 501 NLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTI 560
           NLP RF+  Y+    EK  PVM+HR ++GSIERFIGI+IE++ G  P+WL+P+Q  V T+
Sbjct: 469 NLPERFDVTYIGEDGEKHRPVMLHRVIYGSIERFIGILIEHYAGAFPMWLAPVQVKVLTL 528

Query: 561 TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK-KIPIIIICGDKEASERSI 619
               + YA+EI N L+   +  E D RNETI YKIRE + K KIP+ +I G  E   + +
Sbjct: 529 NDECIPYAKEIMNKLEELGIRAELDDRNETIGYKIREANGKYKIPMQLIIGKNEVENKEV 588

Query: 620 GIRRFGSTTTQKVSLLD 636
            IRRFGS   Q   LLD
Sbjct: 589 NIRRFGS-KDQFSKLLD 604


>gi|154502817|ref|ZP_02039877.1| hypothetical protein RUMGNA_00631 [Ruminococcus gnavus ATCC 29149]
 gi|153796700|gb|EDN79120.1| hypothetical protein RUMGNA_00631 [Ruminococcus gnavus ATCC 29149]
          Length = 642

 Score =  571 bits (1471), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 288/630 (45%), Positives = 401/630 (63%), Gaps = 17/630 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K+   DGS K +    +  ++A  IS  LA+ A A  I+G+V DL   V ++  + I+T
Sbjct: 1   MKIILKDGSFKEYENSKSVIEIAADISEGLARVATAGEIDGEVVDLRTVVDKDCELNILT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
             D +     RH+ +HIMA+AV+ ++PE ++AIGP + DGFYYD D+E PF++D+L +IE
Sbjct: 61  FNDEKGKGAFRHTASHIMAQAVKRLYPETKLAIGPSVADGFYYDVDRETPFTADDLEKIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M++I+  + P  +      +A E F+ K+E YKVE++E +P  E ++ Y QGE+ DLC
Sbjct: 121 KEMKKIVKENLPIEQFTKPRNEAIEYFKEKEEPYKVELIEDLPEDETISFYSQGEFTDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+ ST  VK F KL  +AGAYWRG     ML RIYGTA+  + EL +YL  LEE++K
Sbjct: 181 AGPHLMSTKYVKAF-KLTSLAGAYWRGSEKNKMLQRIYGTAFPKKAELEEYLNMLEEAKK 239

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           RDHRKL +E+ LF + ++G G  F+   G  +   L+ Y R    K  Y EI+TP +L +
Sbjct: 240 RDHRKLGKELGLFMMRDEGPGFPFFLPNGMVLKNVLLDYWREIHRKAGYVEISTPVMLSR 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
           HLW+ SGHWD Y+ NM+       T+ D   FA+KPMNCPG +  +    +SYR+LP+R+
Sbjct: 300 HLWETSGHWDHYKENMYT------TVIDEEDFAIKPMNCPGGILAYQAEPRSYRDLPIRM 353

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            E G V+R+E SG LHGLMRVR FTQDDAH+F T +Q+ +E   +  LI  +Y  FGF K
Sbjct: 354 GELGLVHRHEKSGQLHGLMRVRCFTQDDAHIFMTPDQIKDEIKGVAGLINEVYSLFGF-K 412

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +GSD  W+ A + ++G LD +       +   V  G+GAFYGPK ++ 
Sbjct: 413 YHVELSTRPEDSMGSDEDWEMATDALRGALDDLG------LPYVVNEGDGAFYGPKIDFH 466

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+D+IGR WQCGTIQ+DF LP RF   Y  +  EK  P+MIHR VFGSIERFIGI+IE+F
Sbjct: 467 LEDSIGRTWQCGTIQLDFQLPLRFELEYTGADGEKHRPIMIHRVVFGSIERFIGILIEHF 526

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P+Q  V  I+   +EY Q + + L +  +  E D R E I YKIRE  +KK
Sbjct: 527 AGAFPTWLAPVQVKVLPISDKYLEYGQSVLDQLNAAGIRAEIDTRAEKIGYKIREAQMKK 586

Query: 603 IPIIIICGDKEASERSIGIR-RFGSTTTQK 631
           IP +++ G KE  E+ + +R RF     QK
Sbjct: 587 IPYMLVVGAKEEEEKKVSVRSRFAGDEGQK 616


>gi|226324523|ref|ZP_03800041.1| hypothetical protein COPCOM_02307 [Coprococcus comes ATCC 27758]
 gi|225206971|gb|EEG89325.1| hypothetical protein COPCOM_02307 [Coprococcus comes ATCC 27758]
          Length = 643

 Score =  570 bits (1470), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 290/643 (45%), Positives = 410/643 (63%), Gaps = 18/643 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K+T  DGS K +    +  D+A+ IS  LA+ A A  ++G+V DL   + ++  + I+T
Sbjct: 1   MKITLKDGSSKEYAQSMSVIDIAKDISEGLARVATAGEVDGEVVDLRTVIDKDCELNILT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
             D +     RH+ +HIMA+A++ ++P+ ++AIGP IEDGFYYD D+E P  +++L +IE
Sbjct: 61  FNDEKGKGAFRHTTSHIMAQAIKRLYPDTKLAIGPSIEDGFYYDIDRETPLVAEDLEKIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M++I+  D P  +  +   +A   F+ K E YKVE++E +P    ++ Y QGE+ DLC
Sbjct: 121 AEMKKIVKEDLPIKQYTMPRAEAIAYFKEKDEPYKVELIEDLPEDSVISFYSQGEFTDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+ ST  VK F KL  +AGAYWRG     ML R+YGT++  + EL +YL+ +EE++K
Sbjct: 181 AGPHLMSTKPVKAF-KLTSLAGAYWRGSEKNKMLQRVYGTSYPKKAELEEYLHMMEEAKK 239

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           RDHRKL +E+ LF + E+G G  F+  KG ++   L+ Y R    K  Y EI+TP +L +
Sbjct: 240 RDHRKLGKELGLFMMREEGPGFPFFLPKGMELKNQLLDYWREIHKKAGYVEISTPIMLSR 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
           HLW+ SGHWD Y+ NM+       T+ D   FA+KPMNCPG + V+    +SYR+LP+R+
Sbjct: 300 HLWETSGHWDHYKDNMYT------TVIDDEDFAIKPMNCPGGILVYESEPRSYRDLPLRM 353

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            E G V+R+E SG LHGLMRVR FTQDDAH+F T EQ+ +E   +  LI  +Y  FGF K
Sbjct: 354 GELGLVHRHEKSGQLHGLMRVRCFTQDDAHIFMTPEQVRDEIKGVVKLINEVYSLFGF-K 412

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +GSD  WD A   ++G LD +       +   V  G+GAFYGPK ++ 
Sbjct: 413 YHVELSTRPEDSMGSDEDWDMATEALRGALDDLG------LPYVVNEGDGAFYGPKIDFH 466

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+D+IGR WQCGTIQ+DF LP RFN  Y  +  EK  P+MIHR +FGSIERFIGI+IE+F
Sbjct: 467 LEDSIGRTWQCGTIQLDFQLPLRFNLEYTGADGEKHRPIMIHRVIFGSIERFIGILIEHF 526

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P+Q  V  I+   ++YAQ++ + L +  +  E D R E I YKIRE  +KK
Sbjct: 527 AGAFPTWLAPVQVKVLPISDKYMDYAQKVLDELNNSGVRAEIDTRAEKIGYKIREAQMKK 586

Query: 603 IPIIIICGDKEASERSIGIR-RFGSTTTQKVSLLDAIPILTKE 644
           IP +++ G KE  +  + IR RF     QK SL D +  +  E
Sbjct: 587 IPYMLVVGAKEEEDGLVSIRSRFEGDEGQK-SLTDFLAAIKME 628


>gi|87122885|ref|ZP_01078753.1| threonyl-tRNA synthetase [Marinomonas sp. MED121]
 gi|86161836|gb|EAQ63133.1| threonyl-tRNA synthetase [Marinomonas sp. MED121]
          Length = 572

 Score =  570 bits (1470), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 278/577 (48%), Positives = 391/577 (67%), Gaps = 16/577 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS + F    T   VA+ I   LAK  VA  ING++ D  + + ++ ++ I+T +
Sbjct: 4   ITLPDGSQRVFENAVTVMQVAQDIGPGLAKATVAGRINGELVDACELINQDANLSIVTGK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHS AH++  AV+ ++P  ++AIGP IE+GFYYD   E+  + +++A +EK+
Sbjct: 64  DEDGLEIIRHSFAHLVGHAVKQLFPTAKMAIGPTIENGFYYDIAYERSLTLEDMAAVEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-ENVTLYRQGEWFDLCR 184
           + E+I  D    K+     +AR LF  ++E YKVE+++ +      V LY   E+ D+CR
Sbjct: 124 IGELIKTDYDVNKRMTPVAEARALFVEREEDYKVELIDGLDESISEVGLYHHEEYTDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +T +V + FKLMK+AGAYWRGDSN  ML RIYGTAWN ++EL  +L+ LEE+EKR
Sbjct: 184 GPHVPNT-RVLRHFKLMKLAGAYWRGDSNNAMLQRIYGTAWNDKKELKAHLHRLEEAEKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQH 303
           DHRKL +++DLFH  E+  G++FWH KGW ++QT+  Y+R+K +++ Y+EI TPQ++D+ 
Sbjct: 243 DHRKLGKKLDLFHQQEEAPGMVFWHHKGWSLYQTIEQYIRQKQRENGYQEIKTPQIVDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SGHW  + + MF     +      R +A+KPMNCP HV V+N GLKSYR+LP+RLA
Sbjct: 303 LWEKSGHWGKFSSGMFTTHAEN------RDYAIKPMNCPCHVQVYNQGLKSYRDLPLRLA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHG+MRVR F QDD H+F  ++Q+  E      L+  IY DFGF  I
Sbjct: 357 EFGSCHRNEPSGSLHGIMRVRNFVQDDGHIFVMEDQIQEEVSAFIKLLHEIYDDFGFTDI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           + +LSTRPE+RVGSD +WD +E  +   L+      ++      L GEGAFYGPK E+ L
Sbjct: 417 IYRLSTRPEQRVGSDEVWDKSEKALAEALNAANLEWEE------LPGEGAFYGPKIEFSL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           KDAIGR WQCGTIQ DF++PSR +A +V+    +  PVM+HRA+ GS+ERFIGI+IE  +
Sbjct: 471 KDAIGRIWQCGTIQCDFSMPSRLSAQFVSEDGTRQTPVMLHRAILGSLERFIGILIEETE 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHL 580
           G+LP WLSP Q +V  IT    +Y +++     S+ L
Sbjct: 531 GSLPAWLSPEQVVVMNITDRQSQYCEDLVKRFNSNGL 567


>gi|152975545|ref|YP_001375062.1| threonyl-tRNA synthetase [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|152024297|gb|ABS22067.1| threonyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98]
          Length = 640

 Score =  570 bits (1470), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 280/643 (43%), Positives = 426/643 (66%), Gaps = 17/643 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           I + FPDGS K +    T  ++A SI  SL KKAVA  +N ++ DL   +  +  +EII+
Sbjct: 6   ISIIFPDGSKKEYRKGITLEEIAASIRSSLKKKAVAGKVNDQLFDLRRKLENDAKVEIIS 65

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +    + + RH+ AHI+A+AV+ I+  V++ +GP+IE+GFYYD D     + ++   IE
Sbjct: 66  IDSEEGVNIARHTAAHILAQAVKRIYGNVKLGVGPVIENGFYYDLDLSSSITVEDFPIIE 125

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M+ II  +    +  +S E A + F+   +  K+E+LE+IP  E +T+Y+QGE+ DLC
Sbjct: 126 KEMKNIIHENLNIERIEISREAAEKFFKEADDHLKLELLEAIPEGEVITMYKQGEFVDLC 185

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG +K  F+L  V+GAYWRGDSN  +L R+YG A+++Q+EL +YL+F+EE+ K
Sbjct: 186 RGPHLPSTGYLKA-FQLTHVSGAYWRGDSNNQVLQRVYGVAFSSQKELKKYLHFVEEAAK 244

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           R+HRKL  E++LF  +E+  G+ F+  KG  I   L  ++R  +   DY+E+ TP +++Q
Sbjct: 245 RNHRKLGNELELFMFSEEAPGMPFYLPKGQIIRNELEGFLREIQQAYDYQEVRTPLMMNQ 304

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y+ NM+  +       D ++FALKPMNCPGH+ +F H L+SYR+LP+R+
Sbjct: 305 ELWEKSGHWDHYKDNMYFSEV------DHKSFALKPMNCPGHMLIFKHKLRSYRDLPIRM 358

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG V+R+E SG+L+GL+RVR F QDDAH++ T EQ+ +E   +   I  +Y+ FGFE 
Sbjct: 359 CEFGQVHRHEFSGALNGLLRVRTFCQDDAHIYVTAEQIESEIQSVLKQIDYVYRTFGFE- 417

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             ++LSTRPE  +G D LW+ AE  ++ VL +++ +   RIN     G+GAFYGPK ++ 
Sbjct: 418 YEIELSTRPENSMGDDELWNQAEAALENVLKSLQYNY--RINE----GDGAFYGPKIDFH 471

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+ R  QCGT+Q+DF +P +F+  Y++  +EK  PV+IHRAV GS +RF+ I+IE+F
Sbjct: 472 IKDALKRSHQCGTVQLDFQMPEKFDLHYIDEKNEKRRPVVIHRAVLGSFDRFLAILIEHF 531

Query: 543 KGNLPLWLSPIQAIVTTITSSAVE-YAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            G  P WL+PIQ  V  +++   + Y +EI +  K   + +E D RNE + YKIR+  I+
Sbjct: 532 GGAFPAWLAPIQVKVIPVSNLVHDSYTKEIEDKFKQVDIRVERDIRNEKLGYKIRDAQIQ 591

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIP +++ GDKE    S+ +R++G   ++ VSL + I  L  E
Sbjct: 592 KIPYVLVIGDKEMENASVNVRKYGEENSEVVSLHEFIENLQIE 634


>gi|312898595|ref|ZP_07757985.1| threonyl-tRNA synthetase [Megasphaera micronuciformis F0359]
 gi|310620514|gb|EFQ04084.1| threonyl-tRNA synthetase [Megasphaera micronuciformis F0359]
          Length = 635

 Score =  570 bits (1469), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 280/620 (45%), Positives = 400/620 (64%), Gaps = 18/620 (2%)

Query: 6   KLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITP 64
           ++   DG+ + F    +  D    +S SLAKK +   ++G+V DL  PV++GS +E +T 
Sbjct: 3   EIILQDGAKREFADGCSLGDAVAQLSNSLAKKVLVAKVDGEVTDLRRPVKDGSTVEFLTF 62

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           E       +RH+ +HIMA+AV+ ++ +V+VAIGP IE+GFYYDFD E  F+ D+ A IE 
Sbjct: 63  ESQEGKDALRHTASHIMAQAVRRLFKDVKVAIGPAIENGFYYDFDTEHRFTKDDFAAIEA 122

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
           +M +I+  + P   + +S  +A  +FE + E YKVE+++ +P    +++YRQG+++DLC 
Sbjct: 123 EMHKIVKENLPVTYEEVSRAEALAMFEKENEIYKVELIKDLPEDATISVYRQGDFYDLCA 182

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +TGQVK F KL+ VAGAYWRGD    ML RIYGTA++ Q  L +YL   EE+E+R
Sbjct: 183 GPHVMTTGQVKAF-KLLSVAGAYWRGDEKNKMLQRIYGTAFDKQSSLDEYLKLREEAERR 241

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYE--EINTPQVLDQ 302
           DHRKL +EMDLF   E+G G  F+H KG  + QTL+ +   ++ D YE  +I+TP +L++
Sbjct: 242 DHRKLGKEMDLFSFHEEGPGFPFFHPKGMLLRQTLLKFWN-ELHDRYEYDQISTPIILNR 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+QSGHWD YR NM+     D+       +A+KPMNCPG + V+   + SYR+ P+R 
Sbjct: 301 QLWEQSGHWDHYRENMYFTTIDDEP------YAIKPMNCPGGILVYKSNVHSYRDFPMRT 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AE G V+R+E  G+LHGL RVR FTQDDAH+F    QM  E   + +L    YK FG   
Sbjct: 355 AELGLVHRHELHGALHGLFRVRSFTQDDAHIFMLPSQMKKEITGVLDLFDEAYKMFGL-P 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +GSD +WD A   +K  ++      Q  IN G    +GAFYGPK ++ 
Sbjct: 414 YHVELSTRPENSMGSDEIWDLATQTLKEAIEEKGVPYQ--INEG----DGAFYGPKLDFH 467

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KD+IGR WQCGTIQ+D  +P RF+  YV    +K  PVM+HRA FGSIERFIGI+IE++
Sbjct: 468 VKDSIGRTWQCGTIQLDMLMPERFDMTYVGEDGQKHRPVMVHRACFGSIERFIGILIEHY 527

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P+WL+P Q  +  I+   ++YA E+    K   + +E D  NE I YKIR+  ++K
Sbjct: 528 AGAFPVWLAPTQVKILPISEKQMDYAVELRKKFKKAGIRVELDESNEKIGYKIRKAQMEK 587

Query: 603 IPIIIICGDKEASERSIGIR 622
           +P + + G+KE  E+++ +R
Sbjct: 588 VPYMCVIGEKEVQEQTVSVR 607


>gi|262067494|ref|ZP_06027106.1| threonine--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
 gi|291378856|gb|EFE86374.1| threonine--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
          Length = 637

 Score =  570 bits (1468), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 293/621 (47%), Positives = 410/621 (66%), Gaps = 19/621 (3%)

Query: 11  DGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRS 69
           +G  K +  +    ++A+ IS SLAKK+V   I+GK  D+S  +  +  +E I  + P  
Sbjct: 6   NGENKEYDNNINMFEIAKGISNSLAKKSVGAKIDGKNVDMSYVLDHDAEVEFIDIDSPEG 65

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
             ++RHS AH+MA+AV  ++PE +V IGP+IE+GFYYDFD  + F+ ++L +IE +M+ I
Sbjct: 66  EDIVRHSTAHLMAQAVLRLYPETKVTIGPVIENGFYYDFDPVEQFTEEDLEKIEAEMKRI 125

Query: 130 IARDSPFLKQYLSHEKARELF-ESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           +  +    K  L  ++A + F +  K  YKVE++E IP  E V+ Y+QG++ DLCRG HV
Sbjct: 126 VKENIKLEKYVLPRDEAIDYFRDVDKNKYKVEVVEGIPQGEQVSFYKQGDFTDLCRGTHV 185

Query: 189 RSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRK 248
            STG +K F KL  VAGAYWRG+S   ML RIYG +++ +  L ++L F+EE+EKRDHRK
Sbjct: 186 PSTGYLKAF-KLRTVAGAYWRGNSKNKMLQRIYGYSFSNEDRLKKHLKFMEEAEKRDHRK 244

Query: 249 LAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQ 307
           L +E++LF I+E G G  F+  KG      LI   R++  K  Y ++ TP +L++ LW+ 
Sbjct: 245 LGKELELFFISEYGPGFPFFLPKGMVFRNVLIDLWRKEHEKAGYLQLETPIMLNKELWEI 304

Query: 308 SGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGS 367
           SGHW +YR NM+  +       D   FA+KPMNCPG V  F H L SY++LP RLAE G 
Sbjct: 305 SGHWFNYRENMYTSEI------DELEFAIKPMNCPGGVLSFKHQLHSYKDLPARLAELGK 358

Query: 368 VYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY-KDFGFEKIMVK 426
           V+R+E SG+LHGLMRVR FTQDD+H+F T +Q+ +E + + NLI   Y K FGFE   ++
Sbjct: 359 VHRHEFSGALHGLMRVRSFTQDDSHIFMTPDQVQDEIIGVVNLIDKFYSKLFGFE-YEIE 417

Query: 427 LSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDA 486
           LST+PEK +GS  +WD AE+ + G LD +    + +IN G    +GAFYGPK ++ +KDA
Sbjct: 418 LSTKPEKAIGSQEIWDMAESALAGALDKL--GRKYKINPG----DGAFYGPKLDFKIKDA 471

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNL 546
           IGR WQCGTIQ+DFNLP RF+  Y+    EK  PVM+HR ++GSIERFIGI+IE++ G  
Sbjct: 472 IGRMWQCGTIQLDFNLPERFDVTYIGEDGEKHRPVMLHRVIYGSIERFIGILIEHYAGAF 531

Query: 547 PLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK-KIPI 605
           P+WL+P+Q  V T+    + YA+EI + L+   +  E D RNETI YKIRE + K KIP+
Sbjct: 532 PMWLAPVQVKVLTLNDECIPYAKEIMDKLQELGIRAELDDRNETIGYKIREANGKYKIPM 591

Query: 606 IIICGDKEASERSIGIRRFGS 626
            +I G  E   + + IRRFGS
Sbjct: 592 QLIIGKNEVENKEVNIRRFGS 612


>gi|260893515|ref|YP_003239612.1| threonyl-tRNA synthetase [Ammonifex degensii KC4]
 gi|260865656|gb|ACX52762.1| threonyl-tRNA synthetase [Ammonifex degensii KC4]
          Length = 637

 Score =  569 bits (1467), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 286/620 (46%), Positives = 410/620 (66%), Gaps = 17/620 (2%)

Query: 6   KLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITP 64
           K+  PDG  K FP  AT  DV   +     K+ +A  +NG + DLS P+  E  +E +T 
Sbjct: 3   KVILPDGEEKEFPEGATVKDVLALMPPEYQKRVLAAKVNGVLVDLSAPLPSEAKVEFLTF 62

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
            D     V  HS AHI+A+AV+ ++PE ++AIGP   +GFYYDFD   PFS ++L +IE 
Sbjct: 63  ADSEGKEVYWHSTAHILAQAVKRLYPEAKLAIGPPTANGFYYDFDVPTPFSPEDLERIEA 122

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
           +M+ II  + P +++ ++ E+AR  F S+ EAYKVE+++ +P +  +TLYRQGE+ DLCR
Sbjct: 123 EMKRIIEANLPIVREEIAREEARRFFASRGEAYKVELIDELPPEVPITLYRQGEFVDLCR 182

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPH+ STG VK F KL+ VAGAYWRGD    ML RIYG ++   +EL +YL  LEE+ +R
Sbjct: 183 GPHLPSTGYVKAF-KLLNVAGAYWRGDERNKMLQRIYGISFPEARELEEYLRRLEEARRR 241

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQH 303
           DHR+L +E+DLF   E+G G  F+H KG  +   L +  RR+  +  Y+EI TP +L + 
Sbjct: 242 DHRRLGQELDLFSFQEEGPGFPFFHPKGMIVRNELEALWRREHYRRGYQEIRTPILLKRE 301

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SGHWD Y+ NM+ ++       D + +A+KPMNCPG + ++   + SYRELP+RLA
Sbjct: 302 LWERSGHWDHYKENMYFLEI------DGQPYAVKPMNCPGAILIYQQRVHSYRELPLRLA 355

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD-FGFEK 422
           E G V+R+E SG LHGLMRVR FTQDDAH+FC ++Q+  E L I +L+   Y+  FGF  
Sbjct: 356 EMGLVHRHELSGVLHGLMRVRSFTQDDAHIFCREDQVKEEILGIIDLVDYFYRQVFGF-P 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPEK +G D +W+ A + +K  L+  +     +IN G    EGAFYGPK ++ 
Sbjct: 415 YHVELSTRPEKSMGDDHIWELATSALKEALE--ERGFAYKINEG----EGAFYGPKIDFH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+D +GR WQCGTIQ+DF +P +F+ FY+    ++  PVM+HR +FGS+ERF+ I+IE+F
Sbjct: 469 LEDCLGRTWQCGTIQLDFLMPEKFDLFYIGEDGQRHRPVMLHRVIFGSLERFMAILIEHF 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  PLWL+P+Q  +  IT     YA++I  LL    L +E D RNE ++YK+RE  ++K
Sbjct: 529 AGAFPLWLAPVQVRILPITDRHHAYARQIYELLSRADLRVELDARNEKVSYKVREAQVQK 588

Query: 603 IPIIIICGDKEASERSIGIR 622
           IP +++ GDKE +  ++ +R
Sbjct: 589 IPYMLVIGDKEMNSGTVAVR 608


>gi|34763461|ref|ZP_00144407.1| Threonyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
 gi|237741623|ref|ZP_04572104.1| threonyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
 gi|294785766|ref|ZP_06751054.1| threonine--tRNA ligase [Fusobacterium sp. 3_1_27]
 gi|27886876|gb|EAA24002.1| Threonyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
 gi|229429271|gb|EEO39483.1| threonyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
 gi|294487480|gb|EFG34842.1| threonine--tRNA ligase [Fusobacterium sp. 3_1_27]
          Length = 637

 Score =  569 bits (1466), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 292/621 (47%), Positives = 410/621 (66%), Gaps = 19/621 (3%)

Query: 11  DGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRS 69
           +G  K F  +    ++A+  S SLAKK+V   ++GK  D+S  +  +  +E I  + P  
Sbjct: 6   NGESKEFNNNVNMFEIAKGFSNSLAKKSVGAKVDGKNVDMSYVLDHDADVEFIDIDSPEG 65

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
             ++RHS AH+MA+AV  ++P+ +V IGP+IE+GFYYDFD  + F+ ++L +IE +M++I
Sbjct: 66  EDIVRHSTAHLMAQAVLRLYPDTKVTIGPVIENGFYYDFDPVEQFTEEDLEKIEAEMKKI 125

Query: 130 IARDSPFLKQYLSHEKARELF-ESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           +  +    K  L  ++A + F +  K  YKVEI+E+IP  E V+ Y+QG++ DLCRG HV
Sbjct: 126 VKENIKLEKYVLPRDEAVQYFRDVDKNKYKVEIVEAIPQGEQVSFYKQGDFTDLCRGTHV 185

Query: 189 RSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRK 248
            STG +K F KL  VAGAYWRG+S   ML RIYG +++ +  L ++L  +EE+EKRDHRK
Sbjct: 186 PSTGYLKAF-KLRTVAGAYWRGNSKNKMLQRIYGYSFSNEDRLKKHLKLMEEAEKRDHRK 244

Query: 249 LAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQ 307
           L +E++LF ++E G G  F+  KG  I   LI   R++  K  Y ++ TP +L++ LW+ 
Sbjct: 245 LGKELELFFLSEYGPGFPFFLPKGMIIRNVLIDLWRKEHEKAGYLQLETPIMLNKELWEI 304

Query: 308 SGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGS 367
           SGHW +YR NM+  +       D   FA+KPMNCPG V  F H L SY++LP RLAE G 
Sbjct: 305 SGHWFNYRENMYTSEI------DELEFAIKPMNCPGGVLSFKHQLHSYKDLPARLAELGR 358

Query: 368 VYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY-KDFGFEKIMVK 426
           V+R+E SG+LHGLMRVR FTQDD+H+F T +Q+ +E + + NLI   Y K FGFE   ++
Sbjct: 359 VHRHEFSGALHGLMRVRSFTQDDSHIFMTPDQVQDEIIGVVNLIDKFYSKLFGFE-YEIE 417

Query: 427 LSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDA 486
           LST+PEK +GS  +WD AE  + G LD +    + +IN G    +GAFYGPK ++ +KDA
Sbjct: 418 LSTKPEKAIGSQEIWDMAEAALAGALDKL--GRKYKINPG----DGAFYGPKLDFKIKDA 471

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNL 546
           IGR WQCGTIQ+DFNLP RF+  Y+    EK  PVM+HR ++GSIERFIGI+IE++ G  
Sbjct: 472 IGRMWQCGTIQLDFNLPERFDVTYIGEDGEKHRPVMLHRVIYGSIERFIGILIEHYAGAF 531

Query: 547 PLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK-KIPI 605
           P+WL+P+Q  V T+    + YA+EI N L+   +  E D RNETI YKIRE + K KIP+
Sbjct: 532 PMWLAPVQVKVLTLNDECIPYAKEIMNKLEELGIRAELDDRNETIGYKIREANGKYKIPM 591

Query: 606 IIICGDKEASERSIGIRRFGS 626
            +I G  E   + + IRRFGS
Sbjct: 592 QLIIGKNEVENKGVNIRRFGS 612


>gi|294782476|ref|ZP_06747802.1| threonine--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
 gi|294481117|gb|EFG28892.1| threonine--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
          Length = 637

 Score =  569 bits (1466), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 296/640 (46%), Positives = 415/640 (64%), Gaps = 19/640 (2%)

Query: 11  DGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRS 69
           +G  K +  +    ++A+ IS SLAKK+V   ++GK  D+S  +  +  +E I  + P  
Sbjct: 6   NGENKEYDSNINMFEIAKGISNSLAKKSVGAKVDGKNVDMSYVLDHDAEVEFIDIDSPEG 65

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
             ++RHS AH+MA+AV  ++PE +V IGP+IE+GFYYDFD  + F+ ++L +IE +M+ I
Sbjct: 66  EDIVRHSTAHLMAQAVLRLYPETKVTIGPVIENGFYYDFDPVEQFTEEDLEKIEAEMKRI 125

Query: 130 IARDSPFLKQYLSHEKARELF-ESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           +  +    K  L  ++A + F +  K  YKVEI+E IP  E V+ Y+QG++ DLCRG HV
Sbjct: 126 VKENIKLEKYVLPRDEAIDYFRDVDKNKYKVEIVEGIPQGEQVSFYKQGDFTDLCRGTHV 185

Query: 189 RSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRK 248
            STG +K F KL  VAGAYWRG+S   ML RIYG +++ +  L ++L F+EE+EKRDHRK
Sbjct: 186 PSTGYLKAF-KLRTVAGAYWRGNSKNKMLQRIYGYSFSNEDRLKKHLKFMEEAEKRDHRK 244

Query: 249 LAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQ 307
           L +E++LF I+E G G  F+  KG      LI   R++  K  Y ++ TP +L++ LW+ 
Sbjct: 245 LGKELELFFISEYGPGFPFFLPKGMVFRNVLIDLWRKEHEKAGYLQLETPIMLNKELWEI 304

Query: 308 SGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGS 367
           SGHW +YR NM+  +       D   FA+KPMNCPG V  F H L SY++LP RLAE G 
Sbjct: 305 SGHWFNYRENMYTSEI------DELEFAIKPMNCPGGVLSFKHQLHSYKDLPARLAELGK 358

Query: 368 VYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY-KDFGFEKIMVK 426
           V+R+E SG+LHGLMRVR FTQDD+H+F T +Q+ +E + + NLI   Y K FGFE   ++
Sbjct: 359 VHRHEFSGALHGLMRVRSFTQDDSHIFMTPDQVQDEIIGVVNLIDKFYSKLFGFE-YEIE 417

Query: 427 LSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDA 486
           LST+PEK +GS  +WD AE+ + G LD +    + +IN G    +GAFYGPK ++ +KDA
Sbjct: 418 LSTKPEKAIGSQEIWDMAESALAGALDKL--GRKYKINPG----DGAFYGPKLDFKIKDA 471

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNL 546
           IGR WQCGTIQ+DFNLP RF+  Y+    EK  PVM+HR ++GSIERFIGI+IE++ G  
Sbjct: 472 IGRMWQCGTIQLDFNLPERFDVTYIGEDGEKHRPVMLHRVIYGSIERFIGILIEHYAGAF 531

Query: 547 PLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK-KIPI 605
           P+WL+P+Q  V T+    + YA+EI   L+   +  E D RNETI YKIRE + + KIP+
Sbjct: 532 PMWLAPVQVKVLTLNDECIPYAKEIMAKLQELGIRAELDDRNETIGYKIREANGRYKIPM 591

Query: 606 IIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
            +I G  E   + + IRRFGS      SL D    +  E+
Sbjct: 592 QLIIGKNEVENKEVNIRRFGSKDQFPKSLDDFYEYVVDEA 631


>gi|219666254|ref|YP_002456689.1| threonyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
 gi|219536514|gb|ACL18253.1| threonyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
          Length = 639

 Score =  569 bits (1466), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 278/643 (43%), Positives = 416/643 (64%), Gaps = 17/643 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K+T  DGSI+      +  ++A SISR LAK A+A  +NG+V DLS  + ++  +EIIT
Sbjct: 3   VKITLKDGSIREIESGKSLMELAASISRGLAKAALAGKVNGEVKDLSYALTQDAEVEIIT 62

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +    L ++RHS +H+MAEAV++++P   + IGP I++GFYYDFD E  F+ ++L +IE
Sbjct: 63  ADSEEGLKILRHSTSHLMAEAVRNLFPGTILGIGPAIDNGFYYDFDSEHVFTPEDLEKIE 122

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M+ ++  +  + ++ +S   A + F ++ E YKVE++E +P  E +++Y QG + DLC
Sbjct: 123 AEMRRLVKENKRYERKEISRSDALQYFSAEGEKYKVELIEDLPEDEVISMYTQGGFTDLC 182

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+ STG VK F KLM +AGAYWRG     ML RIYGT W  +++L  YL+ LEE+++
Sbjct: 183 AGPHIPSTGVVKAF-KLMNLAGAYWRGSEKNKMLQRIYGTVWAKKEDLDDYLFKLEEAKR 241

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQ 302
           RDHRKL  E+DLF + ++G G  F+H KG  +   L  + R++  K  Y EI TP +L +
Sbjct: 242 RDHRKLGVELDLFSLHDEGPGFPFFHPKGMVLRNQLEDFWRQEHRKRGYHEIKTPIILSR 301

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
           +LW+ SGHWD Y+ NM+  K  D+       FA+KPMNCPG + ++   L+SYR+LP+R+
Sbjct: 302 NLWENSGHWDHYKDNMYTTKIDDED------FAVKPMNCPGGMIMYKQKLRSYRDLPLRM 355

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            E G V+R+E SG+L+GL+RVR FTQDDAH+F    Q+  E   + +L+   YK FGFE 
Sbjct: 356 GELGLVHRHELSGALNGLLRVRNFTQDDAHIFMLPSQIKAEISGVIDLVDRFYKVFGFE- 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +G+D  W+ A N ++  L+         +N  +  G+GAFYGPK ++ 
Sbjct: 415 YHVELSTRPENSMGADETWEMATNALQEALEA------KGVNYKINPGDGAFYGPKIDFH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+D +GR WQCGTIQ+DF +P +F+  Y+    +K  PVMIHR V+GSIERFI ++ E++
Sbjct: 469 LRDCLGRTWQCGTIQLDFQMPEKFDLTYIGEDGQKHRPVMIHRVVYGSIERFIALLTEHY 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P+Q  V  I+    +YAQ+I   L    +  E D R E I+YKIRE    K
Sbjct: 529 AGAFPTWLAPVQVRVLPISERHEDYAQDIVRRLNDLDIRAEVDERREKISYKIREAQTHK 588

Query: 603 IPIIIICGDKEASERSIGIRRFG-STTTQKVSLLDAIPILTKE 644
           IP  ++ GD+EA   ++ +RR+G +   +K+S+ + I ++ +E
Sbjct: 589 IPFALVVGDQEAETDTVAVRRYGQANAGEKLSVAEFIALIQEE 631


>gi|254304252|ref|ZP_04971610.1| threonine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
 gi|148324444|gb|EDK89694.1| threonine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
          Length = 637

 Score =  568 bits (1465), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 293/629 (46%), Positives = 412/629 (65%), Gaps = 19/629 (3%)

Query: 11  DGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRS 69
           +G  K +  +    ++A+ IS SLAKK+V   ++GK  D+S  +  +  +E I  + P  
Sbjct: 6   NGENKEYNSNVNMFEIAKGISNSLAKKSVGAKVDGKNVDMSYVLDHDAEVEFIDIDSPEG 65

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
             ++RHS AH+MA+AV  ++P+ +V IGP+IE+GFYYDFD  + F+ ++L +IE +M++I
Sbjct: 66  EDIVRHSTAHLMAQAVLRLYPDTKVTIGPVIENGFYYDFDPVEQFTEEDLEKIEAEMKKI 125

Query: 130 IARDSPFLKQYLSHEKARELF-ESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           +  +    K  L  ++A + F +  K  YKVEI+E IP  E V+ Y+QG++ DLCRG HV
Sbjct: 126 VKENIKLEKYVLPRDEAIDYFRDVDKNKYKVEIVEGIPQGEQVSFYKQGDFTDLCRGTHV 185

Query: 189 RSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRK 248
            STG +K F KL  VAGAYWRG+S   ML RIYG +++ +  L ++L  +EE+EKRDHRK
Sbjct: 186 PSTGYLKAF-KLRTVAGAYWRGNSKNKMLQRIYGYSFSNEDRLKKHLKLMEEAEKRDHRK 244

Query: 249 LAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQ 307
           L +E++LF ++E G G  F+  KG  I   LI   R++  K  Y ++ TP +L++ LW+ 
Sbjct: 245 LGKELELFFLSEYGPGFPFFLPKGMVIRNVLIDLWRKEHEKAKYLQLETPIMLNKELWEV 304

Query: 308 SGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGS 367
           SGHW +YR NM+  +       D   FA+KPMNCPG V  F H L SY++LP RLAE G 
Sbjct: 305 SGHWFNYRENMYTSEI------DELEFAIKPMNCPGGVLSFKHQLHSYKDLPARLAELGR 358

Query: 368 VYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY-KDFGFEKIMVK 426
           V+R+E SG+LHGLMRVR FTQDD+H+F T +Q+ +E + + NLI   Y K FGFE   ++
Sbjct: 359 VHRHEFSGALHGLMRVRSFTQDDSHIFMTPDQVQDEIIGVVNLIDKFYSKLFGFE-YEIE 417

Query: 427 LSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDA 486
           LST+PEK +GS  +WD AE  + G LD +    + +IN G    +GAFYGPK ++ +KDA
Sbjct: 418 LSTKPEKAIGSQEIWDMAEAALAGALDKL--GRKYKINPG----DGAFYGPKLDFKIKDA 471

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNL 546
           IGR WQCGTIQ+DFNLP RF+  Y+    EK  PVM+HR ++GSIERFIGI+IE++ G  
Sbjct: 472 IGRMWQCGTIQLDFNLPERFDVTYIGEDGEKHRPVMLHRVIYGSIERFIGILIEHYAGAF 531

Query: 547 PLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK-KIPI 605
           P+WL+P+Q  V T+    + YA+EI N L+   +  E D RNETI YKIRE + + KIP+
Sbjct: 532 PMWLAPVQVKVLTLNDECIPYAKEIMNKLEELGIRAELDDRNETIGYKIREANGRYKIPM 591

Query: 606 IIICGDKEASERSIGIRRFGSTTTQKVSL 634
            +I G  E   + + IRRFGS      SL
Sbjct: 592 QLIIGKNEVENKEVNIRRFGSKDQFSKSL 620


>gi|89892986|ref|YP_516473.1| threonyl-tRNA synthetase [Desulfitobacterium hafniense Y51]
 gi|89332434|dbj|BAE82029.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 641

 Score =  568 bits (1464), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 279/647 (43%), Positives = 417/647 (64%), Gaps = 17/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M   +K+T  DGSI+      +  ++A SISR LAK A+A  +NG+V DLS  + ++  +
Sbjct: 1   MTMMVKITLKDGSIREIESGKSLMELAASISRGLAKAALAGKVNGEVKDLSYALTQDAEV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT +    L ++RHS +H+MAEAV++++P   + IGP I++GFYYDFD E  F+ ++L
Sbjct: 61  EIITADSEEGLKILRHSTSHLMAEAVRNLFPGTILGIGPAIDNGFYYDFDSEHVFTPEDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IE +M+ ++  +  + ++ +S   A + F ++ E YKVE++E +P  E +++Y QG +
Sbjct: 121 EKIEAEMRRLVKENKRYERKEISRSDALQYFSAEGEKYKVELIEDLPEDEVISMYTQGGF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLC GPH+ STG VK F KLM +AGAYWRG     ML RIYGT W  +++L  YL+ LE
Sbjct: 181 TDLCAGPHIPSTGVVKAF-KLMNLAGAYWRGSEKNKMLQRIYGTVWAKKEDLDDYLFKLE 239

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQ 298
           E+++RDHRKL  E+DLF + ++G G  F+H KG  +   L  + R++  K  Y EI TP 
Sbjct: 240 EAKRRDHRKLGVELDLFSLHDEGPGFPFFHPKGMVLRNQLEDFWRQEHRKRGYHEIKTPI 299

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L ++LW+ SGHWD Y+ NM+  K  D+       FA+KPMNCPG + ++   L+SYR+L
Sbjct: 300 ILSRNLWENSGHWDHYKDNMYTTKIDDED------FAVKPMNCPGGMIMYKQKLRSYRDL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+ E G V+R+E SG+L+GL+RVR FTQDDAH+F    Q+  E   + +L+   YK F
Sbjct: 354 PLRMGELGLVHRHELSGALNGLLRVRNFTQDDAHIFMLPSQIKAEISGVIDLVDRFYKVF 413

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE   V+LSTRPE  +G+D  W+ A N ++  L+         +N  +  G+GAFYGPK
Sbjct: 414 GFE-YHVELSTRPENSMGADETWEMATNALQEALEA------KGVNYKINPGDGAFYGPK 466

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++ L+D +GR WQCGTIQ+DF +P +F+  Y+    +K  PVMIHR V+GSIERFI ++
Sbjct: 467 IDFHLRDCLGRTWQCGTIQLDFQMPEKFDLTYIGEDGQKHRPVMIHRVVYGSIERFIALL 526

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
            E++ G  P WL+P+Q  V  I+    +YAQ+I   L    +  E D R E I+YKIRE 
Sbjct: 527 TEHYAGAFPTWLAPVQVRVLPISERHEDYAQDIVRRLNDLDIRAEVDERREKISYKIREA 586

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFG-STTTQKVSLLDAIPILTKE 644
              KIP  ++ GD+EA   ++ +RR+G +   +K+S+ + I ++ +E
Sbjct: 587 QTHKIPFALVVGDQEAETDTVAVRRYGQANAGEKLSVAEFIALIQEE 633


>gi|325288434|ref|YP_004264615.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Syntrophobotulus
           glycolicus DSM 8271]
 gi|324963835|gb|ADY54614.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Syntrophobotulus
           glycolicus DSM 8271]
          Length = 636

 Score =  568 bits (1464), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 282/642 (43%), Positives = 408/642 (63%), Gaps = 16/642 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           IK+   DGS K F    T  ++A SIS  L + AVA  +N +  DLS  +  +  +EI+T
Sbjct: 2   IKVRLKDGSEKEFQEGITLGELAVSISPGLGRIAVAAKVNNETKDLSSILSTDAEVEILT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +    L ++RHSCAH++A+AVQ ++P     IGP I +GFYYDFD E  F+ ++L +IE
Sbjct: 62  MDSEEGLEIMRHSCAHLLAQAVQELYPGTHFGIGPAIANGFYYDFDSEHIFTPEDLEKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           +KM+++      F +Q L+ ++A   FE K E YKVE++  +P +  +++Y QG++ DLC
Sbjct: 122 QKMKKLAKEGQKFTRQELARQEALSFFEQKGEQYKVELIRDLPEEAVISVYAQGDFADLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+ ST  +K F KL  VAGAYWRG     ML RIYG A+  Q EL  +L+ LEE+++
Sbjct: 182 AGPHLPSTKPIKAF-KLQSVAGAYWRGSEKNKMLQRIYGLAFAKQTELDDFLFKLEEAKR 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQ 302
           RDHRKL  E+DLF + ++G G  F+H KG  I   L  + R++  K  Y EI TP +L++
Sbjct: 241 RDHRKLGMELDLFSLHDEGPGFPFFHPKGMVIRNLLEDFWRKEHFKRGYVEIKTPIILNR 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+QSGHWD Y+ NM+  K       D   FA+KPMNCPG + ++   L+SYR+LP+R 
Sbjct: 301 ALWEQSGHWDHYKENMYFTKI------DGVDFAVKPMNCPGGMIMYKTKLRSYRDLPIRC 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            E G V+R+E SG+LHGL+RVR FTQDDAH+F    Q+ +E +++ NL+   YK FGFE 
Sbjct: 355 GELGLVHRHELSGALHGLLRVRNFTQDDAHIFMLPSQIKDEIIRVINLVDDFYKVFGFE- 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V++STRPE  +GSD  W+ A   +   L+ +  S   ++N G    +GAFYGPK ++ 
Sbjct: 414 YHVEVSTRPENSMGSDEEWEMATRALTEALEALNMSY--KVNPG----DGAFYGPKIDFH 467

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LKD + R WQCGTIQ+DF +P +F+  Y+    EK  PVMIHR V+GSIERFI ++ E++
Sbjct: 468 LKDCLDRTWQCGTIQLDFQMPEKFDLNYIGEDGEKHRPVMIHRVVYGSIERFIALLTEHY 527

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P+WL+P+Q  +  I+    EYA ++A  LK   +  E D R E I+YK+RE   +K
Sbjct: 528 AGAFPVWLAPVQVRILPISDKHSEYAAKVAETLKEMDIRTEIDERREKISYKVREAQTEK 587

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P  ++ GD+EA E S+ +RR+G   T K+S  + +  + +E
Sbjct: 588 VPFALVVGDQEAEEGSLAVRRYGEQNTVKMSREEFLATIIEE 629


>gi|237740439|ref|ZP_04570920.1| threonyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
 gi|229422456|gb|EEO37503.1| threonyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
          Length = 637

 Score =  568 bits (1463), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 295/640 (46%), Positives = 416/640 (65%), Gaps = 19/640 (2%)

Query: 11  DGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRS 69
           +G  K +  +    ++A+ IS SLAKK+V   ++GK  D+S  +  +  +E I  + P  
Sbjct: 6   NGENKEYDSNINMFEIAKGISNSLAKKSVGAKVDGKNIDMSYVLDHDAEVEFIDIDSPEG 65

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
             ++RHS AH+MA+AV  ++PE +V IGP+IE+GFYYDFD  + F+ ++L +IE +M+ I
Sbjct: 66  EDIVRHSTAHLMAQAVLRLYPETKVTIGPVIENGFYYDFDPVEQFTEEDLEKIEAEMKRI 125

Query: 130 IARDSPFLKQYLSHEKARELF-ESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           +  +    K  L  ++A + F +  K  YKVEI+E IP  E V+ Y+QG++ DLCRG HV
Sbjct: 126 VKENIKLEKYVLPRDEAIDYFRDVDKNKYKVEIVEGIPQGEQVSFYKQGDFTDLCRGTHV 185

Query: 189 RSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRK 248
            STG +K F KL  VAGAYWRG+S   ML RIYG +++ +  L ++L F+EE+EKRDHRK
Sbjct: 186 PSTGYLKAF-KLRTVAGAYWRGNSKNKMLQRIYGYSFSNEDRLKKHLKFMEEAEKRDHRK 244

Query: 249 LAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQ 307
           L ++++LF I+E G G  F+  KG      LI   R++  K  Y ++ TP +L++ LW+ 
Sbjct: 245 LGKDLELFFISEYGPGFPFFLPKGMVFRNVLIDLWRKEHEKAGYLQLETPIMLNKELWEI 304

Query: 308 SGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGS 367
           SGHW +YR NM+  +       D   FA+KPMNCPG V  F H L SY++LP RLAE G 
Sbjct: 305 SGHWFNYRENMYTSEI------DELEFAIKPMNCPGGVLSFKHQLHSYKDLPARLAELGK 358

Query: 368 VYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY-KDFGFEKIMVK 426
           V+R+E SG+LHGLMRVR FTQDD+H+F T +Q+ +E + + NLI   Y K FGFE   ++
Sbjct: 359 VHRHEFSGALHGLMRVRSFTQDDSHIFMTPDQVQDEIIGVVNLIDRFYSKLFGFE-YEIE 417

Query: 427 LSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDA 486
           LST+PEK +GS  +WD AE+ + G LD +    + +IN G    +GAFYGPK ++ +KDA
Sbjct: 418 LSTKPEKAIGSQEIWDMAESALAGALDKL--GRKYKINPG----DGAFYGPKLDFKIKDA 471

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNL 546
           IGR WQCGTIQ+DFNLP RF+  Y+    EK  PVM+HR ++GSIERFIGI+IE++ G  
Sbjct: 472 IGRMWQCGTIQLDFNLPERFDVTYIGEDGEKHRPVMLHRVIYGSIERFIGILIEHYAGAF 531

Query: 547 PLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK-KIPI 605
           P+WL+P+Q  V T+    + YA+EI + L+   +  E D RNETI YKIRE + + KIP+
Sbjct: 532 PMWLAPVQVKVLTLNDECIPYAKEIMDKLQELGIRAELDDRNETIGYKIREANGRYKIPM 591

Query: 606 IIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
            +I G  E   + + IRRFGS      SL D    +  E+
Sbjct: 592 QLIIGKNEVENKEVNIRRFGSKDQFSKSLDDFYDYVVDEA 631


>gi|169831543|ref|YP_001717525.1| threonyl-tRNA synthetase [Candidatus Desulforudis audaxviator
           MP104C]
 gi|169638387|gb|ACA59893.1| threonyl-tRNA synthetase [Candidatus Desulforudis audaxviator
           MP104C]
          Length = 635

 Score =  568 bits (1463), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 284/643 (44%), Positives = 407/643 (63%), Gaps = 17/643 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDP-VREGSIEIIT 63
           +K+T  DG +  +P   T  +VA  I+  LAK+AV   +NG++  L+ P V + ++E +T
Sbjct: 1   MKITLKDGKVVEYPEGVTPEEVARDIAPRLAKEAVVARVNGRLWGLNQPLVEDATLEFLT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            ED  +  V RHS +H++A+AV+ ++PE ++AIGP + DGFYYDFD  + F+ ++L +IE
Sbjct: 61  FEDEDARLVYRHSTSHVLAQAVKRLYPEARLAIGPAVTDGFYYDFDVPRTFTPEDLERIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M++IIA D P  +  LS ++A EL     E YKVE++  +   E ++ YRQGE+ DLC
Sbjct: 121 SEMEDIIAADLPIERFELSRDEALELVGGDGENYKVELISGLGPDEVISFYRQGEFTDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPHV STG++K   KL+ VAGAYWRGD    ML RIYGT++     L ++L+ LEE+++
Sbjct: 181 AGPHVPSTGRIKAV-KLLSVAGAYWRGDERNKMLQRIYGTSFPKASLLKEHLFRLEEAKR 239

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQ 302
           RDHR+L  E+DLF   E G G  F+H +G  +   L  + R +  K+ Y EI TP +L Q
Sbjct: 240 RDHRRLGFELDLFSFHEAGPGFPFFHPRGMVLRNELERFWREEHTKNGYLEIRTPIILRQ 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD YR NM+     D+       +A+KPMNCPG + V+   L SYRELP+RL
Sbjct: 300 ELWERSGHWDHYRENMYFTTIDDEK------YAVKPMNCPGGILVYRSKLHSYRELPIRL 353

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD-FGFE 421
            E G V+R+E SG LHGLMR R FTQDDAH+FC  EQ+  E ++I +L    Y+  FGF+
Sbjct: 354 GELGLVHRHELSGVLHGLMRARCFTQDDAHIFCRPEQVEEEIVRIMDLTEYFYRQVFGFD 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPEK +GSD +W+ A   ++  L+      +  +N  V  G+GAFYGPK ++
Sbjct: 414 -YHVELSTRPEKSLGSDEIWESATAALRRALE------ERAVNYKVNEGDGAFYGPKVDF 466

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L+D +GR WQCGTIQVDF +P +F   YV    ++  PVMIHR ++GS+ERFI I+ E+
Sbjct: 467 HLRDCLGRTWQCGTIQVDFQMPEKFELEYVGEDGQRHRPVMIHRVIYGSMERFIAILTEH 526

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           F G  P+WL+P+Q  +  IT     YAQE+   L    +  E D RNE + YKIRE  + 
Sbjct: 527 FAGAFPVWLAPVQVRILPITDRHAAYAQEVTEALLRAGVRAEFDGRNEKVGYKIREAQVL 586

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K+P +++ GD+EA  R++ +R   +     + L D    L +E
Sbjct: 587 KVPYMLVIGDREAESRTVAVRHRTAGDLGSMELNDFTGRLVRE 629


>gi|20808138|ref|NP_623309.1| threonyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
 gi|22654110|sp|Q8R9A4|SYT_THETN RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|20516726|gb|AAM24913.1| Threonyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
          Length = 644

 Score =  567 bits (1461), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 293/640 (45%), Positives = 422/640 (65%), Gaps = 16/640 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPE 65
           +T  DG+ + F    T  ++A+SIS  LA++AV    NGK+ +L+  + E G +EI+T E
Sbjct: 13  ITLRDGTKREFEKGITVYEIAKSISDKLAREAVGGKFNGKIVELNTKIEEDGELEILTFE 72

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D     +  H+ +HI+A+AV+ ++ +V++AIGP I++GFYYDFD E+PF++++   IE++
Sbjct: 73  DEEGKKIYWHTSSHILAQAVKRLFKDVKLAIGPAIDNGFYYDFDTERPFTTEDFEAIEEE 132

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M +II  D    +  LS E+A +  + K E YKVE++E IP  E ++ Y+QGE+ DLC G
Sbjct: 133 MNKIIKEDYKLERFVLSKEEAIKFMKEKDEPYKVELIEEIPEGEEISFYKQGEFVDLCAG 192

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PH+ STG VK   KL+ VAGAYW+GD    ML RIYG ++  +  L +YL+ +EE++KRD
Sbjct: 193 PHLPSTGMVKAI-KLLSVAGAYWKGDEKNKMLQRIYGISFPKKSMLDEYLHMMEEAKKRD 251

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHL 304
           HRKL +E+DLF I  +G G  F+H KG  I   L  + R++ IK  Y+EI TP +L++ L
Sbjct: 252 HRKLGKELDLFSIHPEGPGFPFFHPKGMIIRNILEDFWRKEHIKRGYQEIRTPIILNEEL 311

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHWD Y+ NM+  +       D +T+A+KPMNCPG + V+   L+SYR+LP+RL E
Sbjct: 312 WKRSGHWDHYKENMYFTEI------DGQTYAIKPMNCPGAMLVYKSTLRSYRDLPLRLCE 365

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
            G V+R+E SG LHGLMRVR FTQDDAH+F T EQ+ +E L + NL+   YK FGFE   
Sbjct: 366 LGLVHRHELSGVLHGLMRVRSFTQDDAHLFMTPEQVEDEILGVINLVDYFYKIFGFE-YH 424

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           V+LSTRPE  +G+D  W+ A N    ++  +K ++   +   V  GEGAFYGPK ++ LK
Sbjct: 425 VELSTRPENSMGTDEEWELATN---ALISALKRAN---LPYKVNEGEGAFYGPKIDFHLK 478

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D+IGR WQCGTIQ+DF +P RF   Y+    EK  P+M+HR ++GSIERFIGI+ E+F G
Sbjct: 479 DSIGRTWQCGTIQLDFQMPERFELEYIGPDGEKHRPIMLHRVIYGSIERFIGILTEHFAG 538

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P WL+P+Q  V  I+    EYA+++   L+ H + +E D RNE I YKIRE  ++KIP
Sbjct: 539 AFPTWLAPVQVRVLPISEKHHEYARKVYERLQEHDIRVELDDRNEKIGYKIREAQLQKIP 598

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            ++I GD+E  E ++ +R         +SL + I  + KE
Sbjct: 599 YMLIVGDREVEEGNVSLRSRKDGDLGPISLDNFIEKILKE 638


>gi|297569216|ref|YP_003690560.1| threonyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
 gi|296925131|gb|ADH85941.1| threonyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
          Length = 646

 Score =  567 bits (1461), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 282/626 (45%), Positives = 406/626 (64%), Gaps = 19/626 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSD-VAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IE 60
           ++I LT  + S +NFP   T +  + E  S  + K+A+A+ +  ++ DL+ P+  G  + 
Sbjct: 2   TEITLTNAEQS-RNFPAGTTAAQALKEMFSNKVRKRALALQVGDRLVDLAAPLNSGGEVA 60

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           +ITPE P +L ++RHS AH+MAEAV  ++  EVQV IGP   DGFYYDFD++QPF+  +L
Sbjct: 61  VITPESPEALEILRHSAAHVMAEAVLELYGDEVQVTIGPATADGFYYDFDRQQPFTPADL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IE  M EI   D PF ++ +S  +A E F  + + YK+E+L+ I   + V+LY QG +
Sbjct: 121 EKIEALMAEIATADRPFERREVSRAEALEFFRQQGQNYKLELLDEI-EDDQVSLYSQGNF 179

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPH+ STG +K F KL ++AGAYWRGD N  ML RIYGTA+  ++EL  YL  LE
Sbjct: 180 VDLCRGPHLPSTGWLKAF-KLTRLAGAYWRGDENNRMLQRIYGTAFFDKKELRAYLERLE 238

Query: 240 ESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTP 297
           E++KRDHRKL +E++LF I +  G G+I W  KG  + + +  Y R +  +  YE ++TP
Sbjct: 239 EAKKRDHRKLGKELELFTIQDQIGPGLILWQPKGALLRRLIEDYWRDEHYRHGYELLSTP 298

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +  + LWQ SGH D Y  NM++    ++       + LKPMNCP H+A++    +SYRE
Sbjct: 299 HIARRELWQTSGHLDFYGENMYSPMEVEEV-----QYQLKPMNCPFHIAIYKTRKRSYRE 353

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
            P+R  E G+VYR E +G+LHGLMRVRGFTQDDAH+FC  + +  E  +I +L + I + 
Sbjct: 354 FPLRWCELGTVYRFEKTGALHGLMRVRGFTQDDAHIFCRPDHLEEEIFRILDLNLHILQA 413

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF    + LSTRPEK VGSD  WD +   ++  L+      +  ++  +  GEG FYGP
Sbjct: 414 FGFADYDIYLSTRPEKYVGSDENWDRSTAALQAALE------KKGLSYSLDPGEGVFYGP 467

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  +KD +GR WQC TIQVDFNLP RF   Y      +  P+MIHRA+ GS+ERF G+
Sbjct: 468 KIDIKIKDVLGRAWQCSTIQVDFNLPERFELGYTGEDGREHRPIMIHRALMGSLERFFGV 527

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE++ G  PLWL+P+QA +  IT + ++Y +E+   L+   + +E D RNE +NYKIRE
Sbjct: 528 LIEHYAGAFPLWLAPVQARICNITDAQLDYGEEVYAALRRAGVRVEKDLRNEKLNYKIRE 587

Query: 598 HSIKKIPIIIICGDKEASERSIGIRR 623
             ++KIP ++I GDKEA+E ++ +R+
Sbjct: 588 AQLQKIPYMLIVGDKEAAEGTVTVRQ 613


>gi|251795037|ref|YP_003009768.1| threonyl-tRNA synthetase [Paenibacillus sp. JDR-2]
 gi|247542663|gb|ACS99681.1| threonyl-tRNA synthetase [Paenibacillus sp. JDR-2]
          Length = 637

 Score =  566 bits (1460), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 278/628 (44%), Positives = 418/628 (66%), Gaps = 18/628 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEII 62
           +I+  +PD SI+      T + VAES+  +  K  +A AING + DL +   +GS I++I
Sbjct: 2   EIQAVWPDESIRRVLQGTTIAQVAESMDANWKKTIIAGAINGTMADLDETFGDGSRIDMI 61

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPE--VQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
             + P  L + RHS AH++A+A++ ++    V++ IGP+IEDGFYYD D +   S+ +L 
Sbjct: 62  ALDSPEGLYISRHSTAHVLAQAIKRLYGSEAVKLGIGPVIEDGFYYDVDLDHSLSTKDLE 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IE++M+ I+  + P  ++ +S E+A  LF  + E  K+E++ ++P  E + +Y QGE+ 
Sbjct: 122 AIEQEMRSIVKENLPIKRRIVSREEALVLFGERGEPLKLELILNLPDGEVIRIYEQGEFA 181

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ STG++K F KL+ VAGAYWRGDS+  ML RIYGTA+  + EL  YLY LEE
Sbjct: 182 DLCRGPHLPSTGRIKAF-KLLHVAGAYWRGDSDNKMLQRIYGTAFLNKTELADYLYQLEE 240

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQV 299
           ++KRDHRKL +E++LF  +E+  G+ F+  KG  I   L ++ R  + ++DYEE+ TP +
Sbjct: 241 AKKRDHRKLGKELELFMFSEEAPGMPFYLPKGMAIRTALENFSRELLNRNDYEEVRTPFM 300

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           +++ +W+QSGHW+ Y+ NM+  K       D   FALKPMNCPGH+ +F + L+SYRELP
Sbjct: 301 MNKRMWEQSGHWEHYKDNMYFTKV------DESEFALKPMNCPGHMLIFKNSLRSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           VRLAEFG V+R+E SG+L G+MRVR F QDDAH+F   +Q+  E  K+ +LI  +YK FG
Sbjct: 355 VRLAEFGQVHRHELSGALGGMMRVRTFCQDDAHLFVRPDQIEEEIGKVMSLIGEVYKVFG 414

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F    V+LSTRP   +GSD LWD+AE  +K VLD        RIN G    +GAFYGPK 
Sbjct: 415 F-AYTVELSTRPADYMGSDELWDEAEQSLKNVLDA--QGVNYRINEG----DGAFYGPKI 467

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           ++ + DA+ R WQCGTIQ+DF +P +F+  Y+   ++K  PV+IHRA++GS++RF+GI+I
Sbjct: 468 DFHIVDALKRSWQCGTIQLDFQMPEKFDLSYIGEDNKKQRPVVIHRAIYGSLDRFLGILI 527

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E++ G  P+WL+P+QA V  ++   ++YA ++ + L    + +E D R+E +  KIR+  
Sbjct: 528 EHYSGAFPIWLAPVQAKVIPVSEHELDYALQVKSQLIQAGIRVEVDARSEKLGNKIRKSQ 587

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGST 627
           ++K+P +++ G  E    S+ +R+ G  
Sbjct: 588 LEKVPYMLVVGKNERLSGSVSVRKRGEA 615


>gi|326201674|ref|ZP_08191545.1| threonyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
 gi|325988274|gb|EGD49099.1| threonyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
          Length = 635

 Score =  566 bits (1460), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 286/620 (46%), Positives = 407/620 (65%), Gaps = 16/620 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           IK+T  DG IK +    T  +VAESIS  LA+ A+A  ++G+V +L   +     + ++T
Sbjct: 2   IKITLKDGIIKKYQEGVTVREVAESISAGLARAALAGEVDGRVTELDSKLESNCRLNLLT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D     V RH+ +H++A+AV+ ++P+V++AIGP I+ G+YYDF++E+PFS DEL  IE
Sbjct: 62  FDDEGGRLVYRHTASHVLAQAVKRLYPDVKLAIGPAIDSGYYYDFEREKPFSIDELESIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M++II  D    +  L   +A +  E K E+YKVE+++ +P  E ++ Y+QG++ DLC
Sbjct: 122 KEMEKIIKEDLKLERFSLPRNEAIKFMEEKAESYKVELIKDLPEGEEISFYKQGDFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+  T ++K   KL+ VAGAYWRG+    ML RIYGTA+  + +L +YL+ +EE++K
Sbjct: 182 AGPHLSGTVKLKAI-KLLSVAGAYWRGNEKNKMLQRIYGTAFPKKSQLDEYLFRMEEAKK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL RE+DLF I ++G G  F+  KG  +   L  + R + K   Y+EI TP +L++
Sbjct: 241 RDHRKLGRELDLFDILDEGPGFPFFMPKGMVLRNLLEDFWRSEHKKAGYQEIKTPVILNK 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW +SGHWD+Y+ NM+ V        D + +A+KPMNCPG + VF   L SYR+LP R+
Sbjct: 301 ELWLRSGHWDTYKENMYTVDI------DEQEYAIKPMNCPGGILVFKRKLHSYRDLPQRM 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            E G V+R+E SG+LHGLMRVR FTQDDAH+F T EQ+ +E + + NLI   YK FGF K
Sbjct: 355 GELGLVHRHELSGALHGLMRVRCFTQDDAHIFMTPEQITDEIVGVINLIDDFYKVFGF-K 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +GSD +W+ +   ++  LD         I   V  G+GAFYGPK ++ 
Sbjct: 414 YNVELSTRPENSIGSDEMWELSTQGLRKALDL------KGIKYTVNEGDGAFYGPKIDFH 467

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+D+IGR WQCGTIQ+D NLP RF+  Y+    EK  PVMIHR VFGSIERFI I+ E+F
Sbjct: 468 LEDSIGRTWQCGTIQLDMNLPERFDLSYIGPDGEKHRPVMIHRVVFGSIERFIAILTEHF 527

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WLSP+Q  +  +     +YA E+  LL++ ++ +E D RNE I YKIRE  + K
Sbjct: 528 AGAFPAWLSPVQVKILPLVDKHHDYAFEVKKLLEAENVRVEVDSRNEKIGYKIREAQMDK 587

Query: 603 IPIIIICGDKEASERSIGIR 622
            P +++ GDKE   R + +R
Sbjct: 588 TPYMLVIGDKELEGRLVSVR 607


>gi|290969075|ref|ZP_06560610.1| threonine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
 gi|290781031|gb|EFD93624.1| threonine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
          Length = 635

 Score =  566 bits (1458), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 273/619 (44%), Positives = 395/619 (63%), Gaps = 16/619 (2%)

Query: 6   KLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITP 64
           ++   DGS K F    T  +  + +S SLAKK +A  +NGKV DL +PV +G+ +E +T 
Sbjct: 3   EVQLKDGSKKTFADGITLREAVKQLSNSLAKKVLAARVNGKVTDLCEPVADGTTVEFLTF 62

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           +       +RH+ +H+MA+A+  ++P+V+ AIGP IE+GFYYD D E  F+ ++ A IEK
Sbjct: 63  DAQEGKDTLRHTASHVMAQAISHLYPDVKFAIGPAIENGFYYDLDTEHRFTQEDFAAIEK 122

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
           +M  ++  + P  K  +S  +A + F  K + YKVE++E +PA   ++LY+QG++ DLC 
Sbjct: 123 EMAALVKANEPIEKMVVSRAEALQFFRDKHQDYKVELIEDLPADAVISLYKQGDFVDLCA 182

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPH  STG+VK F KL+ VAGAYWRGD    ML RIYGTA+  + +L  Y+    E+EKR
Sbjct: 183 GPHCESTGRVKAF-KLLTVAGAYWRGDEKNKMLQRIYGTAFEKKADLDAYVTMRAEAEKR 241

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQH 303
           DHRKL +++DLF   E+G G  F+H KG  +  +L+ + R    + DY+EI TP +L++ 
Sbjct: 242 DHRKLGKQLDLFSFHEEGPGFPFFHAKGMVLRNSLLKFWRELHAEADYDEIMTPTILNRQ 301

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+QSGHWD YR NM+       T  D + +A+KPMNCPG + V+   + SYR+ P+R A
Sbjct: 302 LWEQSGHWDHYRDNMYF------TTIDEQPYAIKPMNCPGGILVYKSSVHSYRDFPIRAA 355

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           E G V+R+E  G+LHGL RVR FTQDDAH+F    QM +E   + +L    YK FG E  
Sbjct: 356 ELGLVHRHELHGALHGLFRVRCFTQDDAHIFMLPSQMKDEISGVMDLFDKAYKQFGLE-Y 414

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            V+LSTRPE  +GSD +W+ A   +  V++      + ++   +  G+GAFYGPK ++ L
Sbjct: 415 HVELSTRPEDSMGSDEIWESATKTLHEVIE------EKQVPYVINEGDGAFYGPKLDFHL 468

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           KD +GR WQCGTIQ+D  +P RF+  Y+    +K  PVM+HRA FGSIERF+GI+ EN+ 
Sbjct: 469 KDCLGRTWQCGTIQLDMLMPERFDVTYIGEDGQKHRPVMVHRACFGSIERFLGIITENYA 528

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P+WL+P+Q     I+   + YA++ A   K   L +E D  +E I YKIR+  ++K+
Sbjct: 529 GAFPVWLAPVQIKFLPISDKQLAYAEDTARRFKKAGLRVEVDTSSEKIGYKIRKAQMEKV 588

Query: 604 PIIIICGDKEASERSIGIR 622
           P + I GDKE +  +I +R
Sbjct: 589 PYMAIVGDKEMAAGTISVR 607


>gi|218961058|ref|YP_001740833.1| threonyl-tRNA synthetase [Candidatus Cloacamonas acidaminovorans]
 gi|167729715|emb|CAO80627.1| threonyl-tRNA synthetase [Candidatus Cloacamonas acidaminovorans]
          Length = 633

 Score =  565 bits (1456), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 280/643 (43%), Positives = 408/643 (63%), Gaps = 15/643 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           IK+T PDGSI+ +    T   +AE IS  LA++A+   +N K+ D++ P+  + ++ I T
Sbjct: 2   IKITLPDGSIREYSAPVTALKIAEDISPKLAEEAICAEVNNKMVDINYPIDTDATVVIHT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
               +   V  HS AH+MA+AV+ ++PEV++AIGP IE GFYYDFD+++PF+ ++L +IE
Sbjct: 62  FHTEKGKEVYWHSTAHLMAQAVKQLFPEVKIAIGPAIEQGFYYDFDRDEPFTEEDLQKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            KMQE+  +  P+ +  LS E+A +LF    E YK+E+LE IP  E ++ YRQG++ DLC
Sbjct: 122 AKMQELSTQALPYYRTELSKEEAIKLFSEMNETYKLELLEDIPEGEIISSYRQGDFIDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+  TG++K   KL++ +GAYWRGD    ML RIYG ++ T++ELT YL+FLEE+ K
Sbjct: 182 RGPHLPDTGKIKAI-KLLRTSGAYWRGDEKNKMLKRIYGISFPTEKELTDYLHFLEEASK 240

Query: 244 RDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLD 301
           RDHRKL ++++LF I+++ G G++ WH KG  +   + +Y + + +K  Y+ + TP +  
Sbjct: 241 RDHRKLGKDLELFSISDEVGPGLVLWHPKGAMVRHLIETYWKEQHLKKGYQLVYTPHLGR 300

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
            +LW+ SGH D Y+ NM++    +      + + +KPMNCP H++++N  L SYRELP+R
Sbjct: 301 ANLWETSGHLDFYKENMYSKMDIEG-----QDYYIKPMNCPFHISIYNSSLHSYRELPIR 355

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAE G+VYR E SG LHGLMRVRGFTQDDAH+ CT EQM  E  K+    + + K FGF+
Sbjct: 356 LAELGTVYRYERSGVLHGLMRVRGFTQDDAHIICTPEQMDMEVDKLIVFSLDMLKAFGFK 415

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
           + ++ L+T+P+  VG    WD A   +   L  +       +   V  G GAFYGPK + 
Sbjct: 416 EFLIYLATKPDDCVGEKEDWDKATASLANSLQKLG------LEYKVDEGGGAFYGPKIDI 469

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+GR WQC TIQ DFN P RF+  Y+ + +    P MIHRAV GS+ERF   ++E 
Sbjct: 470 KIKDALGRAWQCTTIQFDFNEPERFDMTYIGADNSAHRPYMIHRAVLGSVERFFATLLEY 529

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             GNLPLWL+P+Q ++  IT + + YA++I   L       E D R+E + YKIR     
Sbjct: 530 HSGNLPLWLAPVQIMLIPITDAQLNYARKIEEQLLEQGFRCELDSRSEKMGYKIRSAEKN 589

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIP + I G  E +   + +R+        ++L  AI IL KE
Sbjct: 590 KIPFMCILGKNEENNNQVTLRQHTVGDLGAMNLEAAIAILRKE 632


>gi|323692417|ref|ZP_08106653.1| threonine-tRNA ligase [Clostridium symbiosum WAL-14673]
 gi|323503557|gb|EGB19383.1| threonine-tRNA ligase [Clostridium symbiosum WAL-14673]
          Length = 645

 Score =  564 bits (1454), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 285/632 (45%), Positives = 405/632 (64%), Gaps = 20/632 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K+T  DGS+K +       D+A+ IS  LA+ A A  I+G+  DL   V ++  ++I+T
Sbjct: 2   MKITLKDGSVKEYENQMAVIDIAKDISEGLARMACAGEIDGETVDLRTIVCQDCRLDILT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   LA +RH+ +H+MA+AV+ ++P+ ++AIGP I DGFYYD D   P ++++L +IE
Sbjct: 62  AKDENGLAALRHTASHVMAQAVKRLYPDTKLAIGPSIADGFYYDVDPATPLTAEDLPKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M++II       +  LS E+A  L + K+E YKVE++E +P    ++ YRQGE+ DLC
Sbjct: 122 TEMKKIIKEGLALERFTLSREEAIALMKEKEEPYKVELIEDLPEDAEISFYRQGEFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+ +T  V K FKLM +AGAYWRG     ML+RIY TA+  ++EL  YL  +EE+ K
Sbjct: 182 AGPHLMNTKGVGKAFKLMNLAGAYWRGSEKNKMLTRIYATAFAGKEELESYLRMMEEARK 241

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           RDHRKL RE+ LF + + G G  F+  KG ++  TL+ Y R+   K  Y EI+TP +L++
Sbjct: 242 RDHRKLGRELGLFMMHDAGPGFPFFLPKGMELKNTLLEYWRQIHKKAGYVEISTPVILNR 301

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHWD Y+ NM+       T+ D   +A+KPMNCPG V  +    +SYR+LP+R+
Sbjct: 302 KLWETSGHWDHYKDNMYT------TVIDEEDYAIKPMNCPGGVLAYASEPRSYRDLPLRM 355

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            E G V+R+E SG LHGLMRVR FTQDDAH+F T +Q+ +E   + +LI  +Y  FGF K
Sbjct: 356 GELGLVHRHEKSGQLHGLMRVRCFTQDDAHIFMTPDQIKDEIKGVAHLINEVYSLFGF-K 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +GSD  W+ A   ++  LD +       ++  V  G+GAFYGPK ++ 
Sbjct: 415 YHVELSTRPEDSMGSDEDWEMATEGLRSALDELG------LDYVVNEGDGAFYGPKIDFH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+D+IGR WQCGTIQ+DF LP RF   Y  +  EK  P+MIHR  FGSIERFIGI+IE+F
Sbjct: 469 LEDSIGRTWQCGTIQLDFQLPQRFELEYTGADGEKHRPIMIHRVAFGSIERFIGILIEHF 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P+Q  V  I+    +YA+ +   L+   +  E D R+E I YKIRE   +K
Sbjct: 529 AGAFPTWLAPVQVKVLPISDKYADYAKTVLEELEEAGIRAELDTRSEKIGYKIREAQTQK 588

Query: 603 IPIIIICGDKEASERSIGIR-RF----GSTTT 629
           IP +++ G KE  E ++ +R RF    GS +T
Sbjct: 589 IPYMLVVGQKEEEEGNVSVRSRFAGDEGSDST 620


>gi|283797704|ref|ZP_06346857.1| threonine--tRNA ligase [Clostridium sp. M62/1]
 gi|291074600|gb|EFE11964.1| threonine--tRNA ligase [Clostridium sp. M62/1]
          Length = 650

 Score =  564 bits (1454), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 277/627 (44%), Positives = 401/627 (63%), Gaps = 16/627 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
           +++K+T  DGS+K +    +  D+A+ +S  LA+ A A  ++G+V DL   + ++  + I
Sbjct: 6   TEMKITLKDGSVKEYASAMSVLDIAKDLSEGLARAACAGEMDGEVVDLRTVIDKDCQLNI 65

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +T  D + LA +RH+ +H+MA+AV+ ++P+ ++AIGP I DGFYYD D   P + +++ +
Sbjct: 66  LTARDEKGLAALRHTASHVMAQAVKRLYPDTKLAIGPSIADGFYYDVDPASPMTVEDMGK 125

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE +M++I+  + P  +  L  E+A    + K+E YKVE++E +P    ++ YRQGE+ D
Sbjct: 126 IEAEMKKIVKENLPIERFTLPREEAIAFMKEKEEPYKVELIEDLPEGAEISFYRQGEFVD 185

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LC GPH+ ST  V K +KL+ +AGAYWRG     ML+RIY TA++ ++EL  Y+  +EE+
Sbjct: 186 LCAGPHLMSTKDVGKAYKLLNLAGAYWRGSEKNKMLTRIYATAFSKKEELEAYITMMEEA 245

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           +KRDHRKL +E+ LF + + G G  F+  KG ++  TL+ Y R    K  Y EI+TP +L
Sbjct: 246 KKRDHRKLGKELGLFMMHDAGPGFPFFLPKGMQLKNTLLDYWREIHKKAGYVEISTPIIL 305

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ LW+ SGHWD Y+ NM+       T+ D   +A+KPMNCPG V V+    +SYR+LP+
Sbjct: 306 NRSLWETSGHWDHYKNNMYT------TVIDEEDYAIKPMNCPGGVLVYASEPRSYRDLPL 359

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+ E G V+R+E SG LHGLMRVR FTQDDAH+F T EQ+ +E   +  LI  +Y  FGF
Sbjct: 360 RMGELGLVHRHEKSGQLHGLMRVRCFTQDDAHIFMTPEQIKDEIKGVATLINEVYTLFGF 419

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
            K  V+LSTRPE  +GSD  W+ A   ++  LD +       +   V  G+GAFYGPK +
Sbjct: 420 -KYHVELSTRPEDSMGSDEDWELATEGLRSALDELG------LPYVVNEGDGAFYGPKID 472

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           + L+D IGR WQCGTIQ+DF LP RF   Y  +  EK  P+MIHR VFGSIERFIGI+IE
Sbjct: 473 FHLEDCIGRTWQCGTIQLDFQLPQRFELEYTGADGEKHRPIMIHRVVFGSIERFIGILIE 532

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +F G  P WL+P+Q  V  I+    +YA ++   L    +  E D R+E I YKIRE   
Sbjct: 533 HFAGAFPTWLAPVQVKVLPISDKYADYAAKVYESLSEAGIRAEVDTRSEKIGYKIREAQT 592

Query: 601 KKIPIIIICGDKEASERSIGIR-RFGS 626
            KIP +++ G KE  E ++ +R RF  
Sbjct: 593 NKIPYMLVVGQKEEEEGTVSVRSRFAG 619


>gi|77919019|ref|YP_356834.1| threonyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
 gi|123770467|sp|Q3A4P3|SYT_PELCD RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|77545102|gb|ABA88664.1| Ser-tRNA(Thr) hydrolase [Pelobacter carbinolicus DSM 2380]
          Length = 638

 Score =  564 bits (1454), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 279/623 (44%), Positives = 406/623 (65%), Gaps = 20/623 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           I++  PDGSIK F    T  D+A  I   LA++AVA   N ++ DL  P+ E G +EIIT
Sbjct: 4   IQIELPDGSIKEFSETTTPGDIAAGIGSGLARQAVAARFNDRMVDLCTPITESGRLEIIT 63

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
              P+ L V RH+ AH+MA AV+ ++ + VQV IGP +E+GFYYDF  ++  FS D+  +
Sbjct: 64  LNSPQGLEVYRHTAAHLMAHAVKDLYGDRVQVTIGPAVENGFYYDFYCEDHAFSPDDFEK 123

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK+MQE++  + P  ++ +S + A  LF    E YKVE++E + A   V+LYRQG++ D
Sbjct: 124 IEKRMQELVKANLPIEREEVSRDSAIALFRELGEHYKVELIEDLDAP-TVSLYRQGDFVD 182

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ STG++K F KL  VAGAYWRG     ML RIY TA+  ++EL  YL  LEE+
Sbjct: 183 LCRGPHLPSTGRIKAF-KLTSVAGAYWRGSEKNAMLQRIYATAFPDKKELRTYLNKLEEA 241

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQV 299
            KRDHR++ RE+DLF  +E+ G+G++ WH KG  +   L  + RR+ ++  Y+ +  PQ+
Sbjct: 242 RKRDHRRIGRELDLFSFSEEAGAGLVIWHPKGALLRTLLEDFERREHLRRGYDIVMGPQI 301

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           L   LW+ SGH+D+YR NM+       T  D + + +KPMNC  H+ ++    +SYR+LP
Sbjct: 302 LRTDLWKTSGHFDNYRENMYF------TDVDGQGYGIKPMNCLAHMLIYKARQRSYRDLP 355

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R  E G+V+R+E SG LHGL+RVRGFTQDDAH+ CT +Q+  E  ++   +  +   FG
Sbjct: 356 LRYFELGTVHRHEKSGVLHGLLRVRGFTQDDAHIICTPDQLDEEIKRVLEFVRDVMAIFG 415

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           FE   +++STRPEK +GSDA W+ A   +   L  ++      +   V  G+GAFYGPK 
Sbjct: 416 FE-YEIEISTRPEKSIGSDADWERATGALMNALKDLE------LPHDVNEGDGAFYGPKI 468

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +  LKDA+ R WQC TIQ DF LP RF+  YV    EK  PVM+HR + G+IERFIG++I
Sbjct: 469 DIKLKDALDRRWQCATIQCDFTLPERFDLTYVGKDGEKHRPVMLHRVILGAIERFIGVLI 528

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E++ GN PLWL+P+QA+V  +T +  +YA+ +++ L++  + ++ D RNE + +KIRE  
Sbjct: 529 EHYAGNFPLWLAPVQAVVINVTDNQADYAKSVSDALRAAGVRVQCDLRNEKLGFKIREAQ 588

Query: 600 IKKIPIIIICGDKEASERSIGIR 622
           + KIP +++ GD E S+ ++  R
Sbjct: 589 VDKIPYMLVVGDTEMSDGTVAPR 611


>gi|317121664|ref|YP_004101667.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Thermaerobacter
           marianensis DSM 12885]
 gi|315591644|gb|ADU50940.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Thermaerobacter
           marianensis DSM 12885]
          Length = 644

 Score =  564 bits (1453), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 275/623 (44%), Positives = 416/623 (66%), Gaps = 16/623 (2%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIE 60
           P+ I +  PDGS +  P   T  +VA+ I   LA+ AVA   NG++ DL+ P+ E G +E
Sbjct: 5   PARIVVELPDGSKREVPRGITPLEVAQQIGPRLARDAVAARWNGQIVDLNRPLEEDGRLE 64

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           I+T  D     V RHS AH+MA+AV+ +WPE Q+A+GP +EDGF+YD +  +P S+D+L 
Sbjct: 65  ILTFADEAGREVYRHSTAHLMAQAVKRLWPEAQLAVGPPLEDGFFYDIETPRPLSTDDLE 124

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEK+M  I+A D P  ++ +S ++A +LF ++ E YK+EI+E+IP  E +T+Y QGE+ 
Sbjct: 125 AIEKEMARIVAEDLPIRRRPVSRQEALDLFRARGERYKIEIIEAIPEDEPLTVYEQGEFV 184

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ STG++K F KL  VAGAYW+GD   PML+RIYGT++ + +EL ++L  LEE
Sbjct: 185 DLCRGPHLPSTGRIKAF-KLTGVAGAYWKGDETGPMLTRIYGTSFPSAKELEEHLERLEE 243

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           +++RDHRKL  E+DLFH  E   G  FWH KG  ++  L  + R  + +  Y+E+ TP++
Sbjct: 244 AKRRDHRKLGPELDLFHFEEIAPGYAFWHPKGATVYGLLERFSRELQARYGYQEVRTPEI 303

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           L   LW +SGHW+ YR NMF ++      ++   F +KPMNCPGH  ++   ++SYR+LP
Sbjct: 304 LKVDLWHRSGHWEHYRENMFLIE------REGAQFGVKPMNCPGHCLIYRSRIRSYRDLP 357

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +RLAE+G + R E SG+LHGL+RVRGF QDDAH+F  ++Q+  E  ++  L+ +IY  F 
Sbjct: 358 LRLAEYGRLARFERSGTLHGLLRVRGFEQDDAHLFVREDQIEEEIGRVLELVDAIYGTFD 417

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
             +  +KL+TRP+K +G  ALW+ AE  +   L+             +  G+GAFYGPK 
Sbjct: 418 M-RYEIKLATRPDKFMGEPALWERAEAALARALEAAGR------QYSLAPGDGAFYGPKL 470

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           ++ + D++GR WQ  T+Q+DF +P RF+  YV++  ++  PVMIHRA+ GS+ERFIGI+I
Sbjct: 471 DFYVIDSLGRKWQTATVQLDFQMPIRFDLTYVDASGQEQRPVMIHRAIMGSLERFIGILI 530

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E++ G  P+WL+P+Q  V  ++    +YA+ +   L++  L +E D R+E + YKIR+  
Sbjct: 531 EHYAGAFPVWLAPVQVRVLPVSDRHHDYARRVEERLRAEGLRVEVDARDEKLGYKIRQAQ 590

Query: 600 IKKIPIIIICGDKEASERSIGIR 622
           ++K+P +++ GD+EA E ++ +R
Sbjct: 591 VEKVPYMLVVGDREAQEGTVAVR 613


>gi|295092070|emb|CBK78177.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Clostridium cf.
           saccharolyticum K10]
          Length = 650

 Score =  563 bits (1452), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 277/627 (44%), Positives = 401/627 (63%), Gaps = 16/627 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
           +++K+T  DGS+K +    +  D+A+ +S  LA+ A A  ++G+V DL   + ++  + I
Sbjct: 6   TEMKITLKDGSVKEYASAMSVLDIAKDLSEGLARAACAGEMDGEVVDLRTVIDKDCQLNI 65

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +T  D + LA +RH+ +H+MA+AV+ ++P+ ++AIGP I DGFYYD D   P +++++ +
Sbjct: 66  LTARDEKGLAALRHTASHVMAQAVKRLYPDTKLAIGPSIADGFYYDVDPASPMTAEDMGK 125

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE +M++I+  + P  +  L  E+A    + K+E YKVE++E +P    ++ YRQGE+ D
Sbjct: 126 IEAEMKKIVKENLPIERFTLPREEAIAFMKEKEEPYKVELIEDLPEGAEISFYRQGEFVD 185

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LC GPH+ ST  V K +KL+ +AGAYWRG     ML+RIY TA+  ++EL  Y+  +EE+
Sbjct: 186 LCAGPHLMSTKDVGKAYKLLNLAGAYWRGSEKNKMLTRIYATAFFKKEELEAYITMMEEA 245

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           +KRDHRKL +E+ LF + + G G  F+  KG ++  TL+ Y R    K  Y EI+TP +L
Sbjct: 246 KKRDHRKLGKELGLFMMHDAGPGFPFFLPKGMQLKNTLLDYWREIHKKAGYVEISTPIIL 305

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ LW+ SGHWD Y+ NM+       T+ D   +A+KPMNCPG V V+    +SYR+LP+
Sbjct: 306 NRSLWETSGHWDHYKNNMYT------TVIDEEDYAIKPMNCPGGVLVYASEPRSYRDLPL 359

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+ E G V+R+E SG LHGLMRVR FTQDDAH+F T EQ+ +E   +  LI  +Y  FGF
Sbjct: 360 RMGELGLVHRHEKSGQLHGLMRVRCFTQDDAHIFMTPEQIKDEIKGVATLINQVYTLFGF 419

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
            K  V+LSTRPE  +GSD  W+ A   ++  LD +       +   V  G+GAFYGPK +
Sbjct: 420 -KYHVELSTRPEDSMGSDEDWELATEGLRSALDELG------LPYVVNEGDGAFYGPKID 472

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           + L+D IGR WQCGTIQ+DF LP RF   Y  +  EK  P+MIHR VFGSIERFIGI+IE
Sbjct: 473 FHLEDCIGRTWQCGTIQLDFQLPQRFELEYTGADGEKHRPIMIHRVVFGSIERFIGILIE 532

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +F G  P WL+P+Q  V  I+    +YA ++   L    +  E D R+E I YKIRE   
Sbjct: 533 HFAGAFPTWLAPVQVKVLPISDKYADYAAKVYESLSEAGIRAEVDTRSEKIGYKIREAQT 592

Query: 601 KKIPIIIICGDKEASERSIGIR-RFGS 626
            KIP +++ G KE  E ++ +R RF  
Sbjct: 593 NKIPYMLVVGQKEEEEGTVSVRSRFAG 619


>gi|52078698|ref|YP_077489.1| threonyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52784060|ref|YP_089889.1| threonyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52001909|gb|AAU21851.1| threonyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52346562|gb|AAU39196.1| ThrZ [Bacillus licheniformis ATCC 14580]
          Length = 639

 Score =  563 bits (1452), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 274/635 (43%), Positives = 425/635 (66%), Gaps = 18/635 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
           S IK+ F +G+ K FP   T   +AESIS +L K AV   ++ K  DLS  + ++  ++I
Sbjct: 4   SLIKVQFKEGNTKEFPKGITIKRIAESISTTLRKHAVVAKVDEKFVDLSYTLDKDVKLDI 63

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
            T +    L+V+RH+  HI+A AV+ ++  V + IGP+IED F+YD   E   S ++L  
Sbjct: 64  FTLDSKEGLSVLRHTSTHILAHAVKRLYSSVSLGIGPVIEDEFFYDLKLEHSLSPEDLLA 123

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE++M++II  +    +  +S+E+A +LFE   E  K+EIL  IP  + +TLY+QGE+ D
Sbjct: 124 IEREMEKIIKENIEIKRIVVSYEEAEKLFEENNEPLKLEILRGIPKGQEITLYQQGEFID 183

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ STG +K F KL +V+GAYWRG+  + +L R+YG A+  + +L +YLYFLE++
Sbjct: 184 LCRGPHLPSTGFIKAF-KLTRVSGAYWRGNRQKEVLQRVYGVAFKKKDDLNEYLYFLEQA 242

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD--YEEINTPQV 299
            K DHR+L +++DLF  +E+  G+ F+  KG +I +  +  + R+++++  Y+E++TP +
Sbjct: 243 AKHDHRQLGKQLDLFMFSEEAPGMPFYLPKG-QIVRKELEKLSRELQNNASYDEVHTPFM 301

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           ++  LW++SGHWD Y+ NM+  +  D+T      FA+KPMNCPGH+ +F + L SYR+LP
Sbjct: 302 MNYRLWEKSGHWDHYQENMYFSEV-DNT-----KFAIKPMNCPGHMLIFKNNLYSYRDLP 355

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +RLAE+G V+R+E SGSL+GL+RVR F QDDAH+F  ++Q+ +E  K+ +LI  +Y+  G
Sbjct: 356 IRLAEYGQVHRHEFSGSLNGLLRVRTFCQDDAHIFVREDQIESEIKKVFHLIDQVYRTIG 415

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           FE   V+LSTRP+  +G++ LW+ +E  +K VLD +       I   V  G+GAFYGPK 
Sbjct: 416 FE-YSVELSTRPDDSLGNNHLWEVSEGSLKNVLDDLA------IKYQVNEGDGAFYGPKI 468

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           ++ +KDA+ R  QCGTIQ+DF +P +F+  Y+N ++EK  PV+IHRA+FGSI+RF GI+I
Sbjct: 469 DFHIKDALKRSHQCGTIQLDFQMPEKFDLTYINHNNEKVRPVVIHRAIFGSIDRFFGILI 528

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E+F G  P+WL+PIQ  +  I+   +EY   I + LK H + ++ +  N+ + YKIRE  
Sbjct: 529 EHFAGVFPVWLAPIQVQIIPISHIHLEYCLGIKSELKQHGIRVQINESNQKLGYKIREAQ 588

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           ++KIP  ++ GD E  E  + +R++G    + VS+
Sbjct: 589 VQKIPYTLVVGDNEIKENGVNVRKYGEEQQKNVSI 623


>gi|313680219|ref|YP_004057958.1| ser-tRNA(thr) hydrolase; threonyl-tRNA synthetase [Oceanithermus
           profundus DSM 14977]
 gi|313152934|gb|ADR36785.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Oceanithermus
           profundus DSM 14977]
          Length = 649

 Score =  563 bits (1451), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 281/641 (43%), Positives = 407/641 (63%), Gaps = 20/641 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           +K+  PDG     P  +T  DVA  ISRSLAK+AV   ++G++ DL  P+ EG +++I+T
Sbjct: 1   MKIRLPDGKELELPEGSTARDVAAKISRSLAKEAVGAIVDGELYDLFKPLPEGATVQILT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWP-------EVQVAIGPIIEDGFYYDFDKEQPFSS 116
            +DP    + RH+ AH+MA+AV+  +        EV++ IGP+IE+GFYYD D  +P S 
Sbjct: 61  RKDPEYQQLFRHTLAHVMAQAVKEFFAKKGYDPEEVKLGIGPVIENGFYYDIDAPEPISD 120

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
            +L +IEK M  II R+ P  +  L  E+A   +  K + YK E++E +P  E ++ Y Q
Sbjct: 121 ADLPEIEKLMHRIIKRNLPLRRYVLEREEALARYRGK-DPYKTELIEDLPEGEEISFYEQ 179

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
             + DLCRGPHV STG++   FKL  VAGAYWRGD +RPML RIYG A+ T++EL  YL+
Sbjct: 180 EGFTDLCRGPHVPSTGKIPPHFKLTHVAGAYWRGDESRPMLQRIYGVAFRTKEELEHYLW 239

Query: 237 FLEESEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEI 294
            LEE++KRDHR+L R+++LFHI    G G++ W  KG  + + L+++MR  +IK  Y+ +
Sbjct: 240 QLEEAKKRDHRRLGRQLELFHIDPMVGKGLVLWLPKGNVLREELVAFMRDEQIKRGYQLV 299

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
            TP +    L++ SGH+  Y  + F        ++D   + LKPMNCP HV ++    +S
Sbjct: 300 TTPHIGSLELYKTSGHYPYYAESQFPPM----ELEDGEAYLLKPMNCPHHVRIYAMRPRS 355

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YRELP+RLAEFG+VYR E SG LHGL RVRGFTQDDAH+FCT EQ+  E L + +L + +
Sbjct: 356 YRELPLRLAEFGTVYRFEQSGELHGLTRVRGFTQDDAHIFCTPEQVKEEFLGVLDLTLKV 415

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           ++  G      ++  R     GSD    DAE+         +   +  ++  +  G+ AF
Sbjct: 416 FRTLGLSDFRARIGVRDP---GSDKYVGDAEHWAVAERQIQEACDEAGLDYTIEEGDAAF 472

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK ++++KD + R+WQ GTIQVD+NLP RF+  Y  +  E+  PVMIHRA FGS+ERF
Sbjct: 473 YGPKLDFVVKDVLSREWQLGTIQVDYNLPERFDIGYKGADGEEHRPVMIHRAPFGSLERF 532

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
           IGI+IE+F G  PLWL+P+Q +V  IT    +YA+++   L++  L +E D R E +N K
Sbjct: 533 IGILIEHFAGEFPLWLAPVQVVVVPITDRHHDYARKVRAELEAAGLRVEVDDRPERMNAK 592

Query: 595 IREHSIKKIPIIIICGDKEASERSIGI--RRFGSTTTQKVS 633
           IR+   +K+P+I++ GDKE  E ++ +  RR G  TT+ +S
Sbjct: 593 IRDAETQKVPVILVVGDKETEEGTVAVRDRRTGERTTRALS 633


>gi|237744663|ref|ZP_04575144.1| threonyl-tRNA synthetase [Fusobacterium sp. 7_1]
 gi|229431892|gb|EEO42104.1| threonyl-tRNA synthetase [Fusobacterium sp. 7_1]
          Length = 637

 Score =  563 bits (1451), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 290/629 (46%), Positives = 411/629 (65%), Gaps = 19/629 (3%)

Query: 11  DGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRS 69
           +G  K F  +    ++A+  S SLAKK+V   ++GK  D+S  +     +E I  + P  
Sbjct: 6   NGESKEFNNNVNMFEIAKGFSNSLAKKSVGAKVDGKNVDMSYVLDHNAEVEFIDIDSPEG 65

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
             ++RHS AH+MA+AV  ++P+ +V IGP+IE+GFYYDFD  + F+ ++L +IE +M++I
Sbjct: 66  EDIVRHSTAHLMAQAVLRLYPDTKVTIGPVIENGFYYDFDPVEQFTEEDLEKIEAEMKKI 125

Query: 130 IARDSPFLKQYLSHEKARELF-ESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           +  +    K  L  ++A + F +  K  YKVEI+E+IP  E V+ Y+QG++ DLCRG HV
Sbjct: 126 VKENIKLEKYVLPRDEAIKYFRDVDKNKYKVEIVEAIPQGEQVSFYKQGDFTDLCRGTHV 185

Query: 189 RSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRK 248
            STG +K F KL  +AGAYWRG+S   ML RIYG +++ + +L ++L  +EE+EKRDHRK
Sbjct: 186 PSTGYLKAF-KLRALAGAYWRGNSKNKMLQRIYGYSFSNEDKLKKHLKLVEEAEKRDHRK 244

Query: 249 LAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQ 307
           L +E++LF ++E G G  F+  KG  +   L+   R++  K +Y ++ TP +L++ LW+ 
Sbjct: 245 LGKELELFFLSEYGPGFPFFLPKGMIVRNVLVDLWRKEHEKAEYLQLETPIMLNKELWEI 304

Query: 308 SGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGS 367
           SGHW +YR NM+  +       D   FA+KPMNCPG V  F H L SY++LP RLAE G 
Sbjct: 305 SGHWFNYRENMYTSEI------DEVEFAIKPMNCPGGVLAFKHQLHSYKDLPARLAELGK 358

Query: 368 VYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY-KDFGFEKIMVK 426
           V+R+E SG+LHGLMRVR FTQDD+H+F T EQ+ +E + + NLI   Y K FGFE   ++
Sbjct: 359 VHRHEFSGALHGLMRVRSFTQDDSHIFMTPEQVQDEIIGVVNLIDKFYSKLFGFE-YEIE 417

Query: 427 LSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDA 486
           LST+PEK +GS  +WD AE+ + G LD +    + +IN G    +GAFYGPK ++ +KDA
Sbjct: 418 LSTKPEKAIGSQEIWDMAESALAGALDKL--GRKYKINPG----DGAFYGPKLDFKIKDA 471

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNL 546
           IGR WQCGTIQ+DFNLP RF+  Y+    EK  PVM+HR ++GSIERFIGI+IE++ G  
Sbjct: 472 IGRMWQCGTIQLDFNLPERFDVTYIGEDGEKHRPVMLHRVIYGSIERFIGILIEHYAGAF 531

Query: 547 PLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK-KIPI 605
           P+WL+P+Q  V TI    V YA+EI   L    +  E D R ETI YKIRE + + +IP+
Sbjct: 532 PMWLAPVQVKVMTINDECVPYAKEIMAKLDELGIRAELDDRTETIGYKIREANGRYRIPM 591

Query: 606 IIICGDKEASERSIGIRRFGSTTTQKVSL 634
            +I G  E   + + IRRFGS      SL
Sbjct: 592 QLIIGKNEVENKEVNIRRFGSKDQFSKSL 620


>gi|307266242|ref|ZP_07547784.1| threonyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306918772|gb|EFN49004.1| threonyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 634

 Score =  563 bits (1450), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 293/640 (45%), Positives = 413/640 (64%), Gaps = 16/640 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPE 65
           +T  DG+ + F    T  ++A+SIS  LAK+AV    NGKV +L+  + E G +EI+T +
Sbjct: 3   ITLKDGTQREFEKGMTVYEIAKSISERLAKEAVGGKFNGKVVELNTKIEEDGKLEILTFD 62

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D     +  H+ +HI+A+AV+ ++ +V++AIGP I++GFYYDFD E+PF++++   IE++
Sbjct: 63  DEEGKKIYWHTSSHILAQAVKRLFKDVKLAIGPAIDNGFYYDFDTERPFTTEDFEAIEQE 122

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M  II  D    +  L  ++A +L + K E YKVE++E IP  E ++ Y+QGE+ DLC G
Sbjct: 123 MNRIIKEDYKLERFVLPKDEAIKLMKEKDEPYKVELIEEIPEGEEISFYKQGEFTDLCAG 182

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PH+ STG VK   KL+ VAGAYW+GD    ML RIYG ++  +  L QYL+ LEE++KRD
Sbjct: 183 PHLMSTGMVKTI-KLLSVAGAYWKGDEKNKMLQRIYGISFPKKSMLDQYLHMLEEAKKRD 241

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHL 304
           HRKL +E+DLF I  +G G  F+H KG  I   L  + R++ IK  Y+EI TP +L++ L
Sbjct: 242 HRKLGKELDLFSIHPEGPGFPFFHPKGMIIRNILEDFWRKEHIKHGYQEIKTPIILNEEL 301

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHWD Y+ NM+  +       D  T+A+KPMNCPG + V+   + SYR+LP+RL E
Sbjct: 302 WRRSGHWDHYKENMYFTEI------DGETYAIKPMNCPGAMLVYKSTMHSYRDLPLRLCE 355

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
            G V+R+E SG LHGLMRVR FTQDDAH+F T EQ+ +E L + NL+   YK FGFE   
Sbjct: 356 LGLVHRHELSGVLHGLMRVRSFTQDDAHLFMTPEQVEDEILGVINLVDYFYKIFGFE-YF 414

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           V+LSTRPE  +GSD  W+ A N +   L+ +       +   V  G+GAFYGPK ++ LK
Sbjct: 415 VELSTRPENSMGSDEDWELATNALISALNRVN------LPYKVNEGDGAFYGPKIDFHLK 468

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D+IGR WQCGTIQ+DF +P RF   Y+    EK  P+M+HR ++GSIERFIGI+ E+F G
Sbjct: 469 DSIGRTWQCGTIQLDFQMPERFELEYIGPDGEKHRPIMLHRVIYGSIERFIGILTEHFAG 528

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P WL+P+Q  V  I+     YAQ +   L  + +  E D RNE I YKIRE  ++KIP
Sbjct: 529 AFPTWLAPVQVRVLPISDKHYAYAQHVYGRLLENDIRAELDDRNEKIGYKIREAQLQKIP 588

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            ++I GDKE  + ++ +R         +SL + I  + KE
Sbjct: 589 YMLIVGDKEVEQGTVSLRSRKEGDLGAISLNEFIEKILKE 628


>gi|326391979|ref|ZP_08213481.1| threonyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
 gi|325991980|gb|EGD50470.1| threonyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
          Length = 634

 Score =  563 bits (1450), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 293/640 (45%), Positives = 413/640 (64%), Gaps = 16/640 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPE 65
           +T  DG+ + F    T  ++A+SIS  LAK+AV    NGKV +L+  + E G +EI+T +
Sbjct: 3   ITLKDGTQREFEKGMTVYEIAKSISERLAKEAVGGKFNGKVVELNTKIEEDGKLEILTFD 62

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D     +  H+ +HI+A+AV+ ++ +V++AIGP I++GFYYDFD E+PF++++   IE++
Sbjct: 63  DEEGKKIYWHTSSHILAQAVKRLFKDVKLAIGPAIDNGFYYDFDTERPFTTEDFEAIEQE 122

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M  II  D    +  L  ++A +L + K E YKVE++E IP  E ++ Y+QGE+ DLC G
Sbjct: 123 MNRIIKEDYKLERFVLPKDEAIKLMKEKDEPYKVELIEEIPEGEEISFYKQGEFTDLCAG 182

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PH+ STG VK   KL+ VAGAYW+GD    ML RIYG ++  +  L QYL+ LEE++KRD
Sbjct: 183 PHLMSTGMVKTI-KLLSVAGAYWKGDEKNKMLQRIYGISFPKKSMLDQYLHMLEEAKKRD 241

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHL 304
           HRKL +E+DLF I  +G G  F+H KG  I   L  + R++ IK  Y+EI TP +L++ L
Sbjct: 242 HRKLGKELDLFSIHPEGPGFPFFHPKGMIIRNILEDFWRKEHIKHGYQEIKTPIILNEEL 301

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHWD Y+ NM+  +       D  T+A+KPMNCPG + V+   + SYR+LP+RL E
Sbjct: 302 WRRSGHWDHYKENMYFTEI------DGETYAIKPMNCPGAMLVYKSTMHSYRDLPLRLCE 355

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
            G V+R+E SG LHGLMRVR FTQDDAH+F T EQ+ +E L + NL+   YK FGFE   
Sbjct: 356 LGLVHRHELSGVLHGLMRVRSFTQDDAHLFMTPEQVEDEILGVINLVDYFYKIFGFE-YF 414

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           V+LSTRPE  +GSD  W+ A N +   L+ +       +   V  G+GAFYGPK ++ LK
Sbjct: 415 VELSTRPENSMGSDEDWELATNALISALNRVN------LPYKVNEGDGAFYGPKIDFHLK 468

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D+IGR WQCGTIQ+DF +P RF   Y+    EK  P+M+HR ++GSIERFIGI+ E+F G
Sbjct: 469 DSIGRTWQCGTIQLDFQMPERFELEYIGPDGEKHRPIMLHRVIYGSIERFIGILTEHFAG 528

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P WL+P+Q  V  I+     YAQ +   L  + +  E D RNE I YKIRE  ++KIP
Sbjct: 529 AFPTWLAPVQVRVLPISDKHYAYAQNVYGRLLENDIRAELDDRNEKIGYKIREAQLQKIP 588

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            ++I GDKE  + ++ +R         +SL + I  + KE
Sbjct: 589 YMLIVGDKEVEQGTVSLRSRKEGDLGAISLNEFIEKILKE 628


>gi|218782046|ref|YP_002433364.1| threonyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
 gi|226701455|sp|B8FN26|SYT_DESAA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|218763430|gb|ACL05896.1| Threonyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
          Length = 636

 Score =  563 bits (1450), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 277/632 (43%), Positives = 411/632 (65%), Gaps = 20/632 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           I +T PDG I       +G DVA+ IS   A+  VAV ++GK+ DLS P+  + S+  IT
Sbjct: 2   INITLPDGKIVESDGPVSGEDVAKGISEGFARNCVAVEVDGKLTDLSTPIETDASVVFIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D + L ++RHS AH+MAEA+ +++P+ ++ IGP+IEDGFYYD D   P S D+  +IE
Sbjct: 62  TKDEQGLDIMRHSAAHVMAEAILNLYPDAKLTIGPVIEDGFYYDIDM-PPISEDDFPKIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           +++ +II    PF+++ LS  +A + +  K  A+K E++  +     +++Y QG + DLC
Sbjct: 121 QEINKIIKAKKPFVRKTLSKAEALDFY--KDNAFKTELISEL-EDGTISIYEQGGFTDLC 177

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +TG VK   KLMKV+GAYWRGDS RPML R+YGTA+  ++EL  YL+ LEE++K
Sbjct: 178 RGPHVPNTGLVKTL-KLMKVSGAYWRGDSERPMLQRLYGTAFFDKKELKSYLHLLEEAKK 236

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL   +DLF   E+ +G+ F+H +G +++  L++Y R + K   Y E  TP +L++
Sbjct: 237 RDHRKLGTALDLFSFHEEAAGMPFFHARGMELWNALLAYWREEHKKAGYVETKTPIMLNK 296

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHW++YR NM+        I+D   +A+KPMNCPG + ++     SY +LP+R 
Sbjct: 297 SLWERSGHWENYRENMYT-----SLIEDF-DYAIKPMNCPGGMLLYKTKHHSYNDLPIRA 350

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            E G V+R+E SG L GL RVR F QDDAH+F T+E + +E L +  L+  +Y  FG   
Sbjct: 351 GEIGLVHRHELSGVLSGLFRVRAFHQDDAHIFMTEEMIEDEILGVLQLVERMYSTFGL-G 409

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             ++LSTRPEK +G+D  W+ A   ++  LD  K+    +IN G    +GAFYGPK +  
Sbjct: 410 FHLELSTRPEKTIGTDEQWEKATEGLRAALD--KSGRDYKINEG----DGAFYGPKIDIH 463

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+GR WQCGTIQ+D NLP RF+  YV + +++  PVMIHR ++GSIERF+GI+IE++
Sbjct: 464 IKDALGRTWQCGTIQLDMNLPERFDLTYVGADNQRHRPVMIHRVIYGSIERFLGILIEHY 523

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  PLWLSP QA+V  +      YA+E+   L+   L +E D R E+IN K+R+  + K
Sbjct: 524 AGKFPLWLSPCQAVVLAMNDDVAGYAKEVKARLEEAGLRMEIDLRAESINKKVRDAQLSK 583

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           IP+++  G KE + +++ +R         V++
Sbjct: 584 IPLMLTVGGKEEAAQTLAVRTLDGKVKYGVTI 615


>gi|150389418|ref|YP_001319467.1| threonyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
 gi|149949280|gb|ABR47808.1| threonyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
          Length = 636

 Score =  562 bits (1449), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 272/620 (43%), Positives = 410/620 (66%), Gaps = 16/620 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           +K+   DGS++      +  DVA+ IS+ LA+ A+   ++GK  DL  P+  +  + I+ 
Sbjct: 4   VKVALKDGSVREVEKGTSILDVAKEISQGLARVAIGAELDGKKIDLFAPIEGDCQLSILR 63

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            ED      +RH+ AH++A+AV  ++P  ++AIGP I++GFYYDFD E  F  ++L +IE
Sbjct: 64  FEDEGGEEFLRHTSAHLLAQAVLRLFPNTKLAIGPAIDNGFYYDFDTEHRFIPEDLEKIE 123

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +MQ+I+  D    +  LS +KA EL + + E YK+E+++ +P    ++ Y+QGE+ DLC
Sbjct: 124 AEMQKIVKEDLHVERFELSRDKAIELVKEQGEDYKLELIQDLPEDAVISFYKQGEFTDLC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPHV STG++K F KL+ +AGAYWRGD    ML RIYGT++  + +L  +L  LEE++K
Sbjct: 184 AGPHVLSTGKIKAF-KLLSIAGAYWRGDEKNKMLQRIYGTSFTKKADLEAHLERLEEAKK 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQ 302
           RDHRK+ +E+DLF + E+G G  F+H  G  +   L ++ RR+  K  YEEI TP +L++
Sbjct: 243 RDHRKIGKELDLFSLNEEGPGFPFFHPNGMIVRNELENFWRREHTKRGYEEIKTPIILNE 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+QSGHWD Y+ NM+     D        +A+KPMNCPG + ++   + SYR+LP+R+
Sbjct: 303 QLWKQSGHWDHYQENMYFTNIDD------ANYAVKPMNCPGSILMYKRKMHSYRDLPIRM 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            E G V+R+E SG+LHGLMRVR FTQDDAH+F   EQ+ +E L + N +   YK FGF K
Sbjct: 357 GELGLVHRHELSGALHGLMRVRCFTQDDAHIFMLPEQIKDEILGVMNFVDYFYKVFGF-K 415

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             ++LSTRP+  +G+D  WD A N ++  L+  +N+ + ++N G    +GAFYGPK ++ 
Sbjct: 416 YHIELSTRPKDSMGTDEEWDLAINSLREALE--ENNVKYKLNEG----DGAFYGPKIDFH 469

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+DAIGR WQCGTIQ+DF +P RF+  YV +  EK  P+MIHR +FGSIERFIGI+IE++
Sbjct: 470 LEDAIGRTWQCGTIQLDFQMPQRFDINYVGADGEKHRPIMIHRVIFGSIERFIGILIEHY 529

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P+QA +  IT + +EYA+++   +    + +  D R+E I +KIRE  +++
Sbjct: 530 AGKFPAWLAPVQAKILPITDNHLEYARKLQQQMLEKDIRVVIDERSEKIGFKIREARLER 589

Query: 603 IPIIIICGDKEASERSIGIR 622
           +P +++ GDKE    ++ +R
Sbjct: 590 VPYMLVIGDKEVESETVAVR 609


>gi|32490830|ref|NP_871084.1| hypothetical protein WGLp081 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|31340448|sp|Q8D3C0|SYT_WIGBR RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|25166036|dbj|BAC24227.1| thrS [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 636

 Score =  562 bits (1449), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 260/610 (42%), Positives = 402/610 (65%), Gaps = 18/610 (2%)

Query: 16  NFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIR 74
           N+P+     ++ +   ++L++  +A  INGK+ D+S+ +  +GS+E++ PE+   + +IR
Sbjct: 14  NYPISII--EIIKKFDKNLSENCIAAKINGKLLDVSEIINYDGSLELVKPENKIGIRIIR 71

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDS 134
            SC+H++  A++ +WP  ++A   I E+GFYYD D     S ++L  IEKKM +++  + 
Sbjct: 72  CSCSHLLGYAIKQLWPTSKMATNNITENGFYYDIDLNHKLSKNDLKLIEKKMHQLLKINF 131

Query: 135 PFLKQYLSHEKARELFESKKEAYKVEILE-SIPAKENVTLYRQGEWFDLCRGPHVRSTGQ 193
              K  ++  KA E+F++  E YK++ILE +I    ++ +Y Q ++ DLC  PHV +  +
Sbjct: 132 KINKINVTWGKAYEMFKNLNEIYKIKILEDNISKNSSLYIYHQEQYVDLCTLPHVPNI-K 190

Query: 194 VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREM 253
              FFK+ K++GAYW+G+    ML RIY T+W++  +L  ++  ++E E RDHRK+ +++
Sbjct: 191 FCMFFKIQKISGAYWKGNKKNKMLQRIYVTSWDSNSKLKNFIKNIKELEHRDHRKIGKKL 250

Query: 254 DLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWD 312
           DLFHI E+  G++FWH  GW IF+ L  ++R+K+K   Y+E+ TP ++D  LW+ SGH D
Sbjct: 251 DLFHIYENSPGMVFWHHNGWIIFRILEKFIRKKLKKFYYQEVKTPCIIDHDLWRLSGHLD 310

Query: 313 SYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE 372
           +Y+  MF     +      + + +KPMNCP HV +F   ++SY+ELP R++EFGS +RNE
Sbjct: 311 NYKNYMFHTNSEN------KQYCIKPMNCPAHVLIFKKKIRSYKELPFRISEFGSCHRNE 364

Query: 373 PSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
           PSGSLHGLMR+R FTQDDAH+FC  +Q+ +E      +I  +Y  FGF+KI+VKLSTRPE
Sbjct: 365 PSGSLHGLMRIRNFTQDDAHIFCMHDQILSEVSSCIKMIYEVYSCFGFKKILVKLSTRPE 424

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
            R+GSD +WD AE  ++  L       +++I   + L EGAFYGPK E+ L D++ R WQ
Sbjct: 425 NRIGSDEIWDFAEKQLELSL------KKNKILFKIDLNEGAFYGPKIEFTLLDSLNRKWQ 478

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
           CGTIQ+D  L ++  A+Y+N+ +EK +PV+IHRA+ GS+ERFIGI+ E F G  PLW+SP
Sbjct: 479 CGTIQLDLCLANKLQAYYINNKNEKTNPVIIHRAILGSMERFIGIITEEFSGKYPLWISP 538

Query: 553 IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
           IQ  V  ++   ++Y ++I        + I +D RNE I++KIRE++++ IP IIICG K
Sbjct: 539 IQVGVINVSVDQIDYVKKITKFFLQKKIRIISDLRNEKISFKIREYTLRFIPYIIICGKK 598

Query: 613 EASERSIGIR 622
           E    SI +R
Sbjct: 599 EMESNSISVR 608


>gi|42523121|ref|NP_968501.1| hypothetical protein Bd1617 [Bdellovibrio bacteriovorus HD100]
 gi|73919772|sp|Q6MML0|SYT_BDEBA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|39575326|emb|CAE79494.1| thrS [Bdellovibrio bacteriovorus HD100]
          Length = 656

 Score =  562 bits (1449), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 277/632 (43%), Positives = 404/632 (63%), Gaps = 21/632 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAING--KVCDLSDPVREGS-I 59
           S I +  PD S K F    T  +VA SI   LAK+ +   +NG  ++ DL   +++ + +
Sbjct: 4   SQITIILPDNSTKVFDHEPTALEVAMSIGPRLAKETLGAKLNGSTEISDLRTVLKDQTKV 63

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            ++T + P S+ V+RHSCAHIMA+A+Q IWPEV+V IGP+I++GFYYDFD    F+ +  
Sbjct: 64  ALVTTKSPESVEVVRHSCAHIMAQAIQDIWPEVKVTIGPVIDNGFYYDFDSPFAFTEEHF 123

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVT--LYRQG 177
            +IEKKM EI+++D P  ++    +KA E F+   E +KVE++E +  K   T  +Y  G
Sbjct: 124 EKIEKKMSEIVSKDLPIHREDWPIQKAIETFKGMNERFKVELIEDLAKKGETTVGIYFNG 183

Query: 178 -EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
             WFDLCRGPH++STGQ+K F KL+ VAGAYWRGD     L R+Y TA+N +++L  YL+
Sbjct: 184 TSWFDLCRGPHIQSTGQIKAF-KLLSVAGAYWRGDEKNAQLQRVYATAFNDKKDLETYLH 242

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEIN 295
            +EE++KRDHRKL +E+ +F+  E   G  F+  KG  ++ +L +Y+R    +  Y+E+ 
Sbjct: 243 NIEEAKKRDHRKLGKELGMFYFNELAPGSPFFTGKGATVYNSLQTYLRELYFETGYQEVI 302

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TPQ+ D +L+  SGH+ +Y+ NMF  K       D R FA KPMNCP H  ++N    SY
Sbjct: 303 TPQIFDVNLFHTSGHYQNYKENMFFTKV------DERDFASKPMNCPSHCLLYNSEKYSY 356

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           R+LP+++A+FG ++R E SG++HGL RVR F QDDAH+FC  +Q+  E  K  NL+  +Y
Sbjct: 357 RDLPIKMADFGRLHRYEKSGAMHGLTRVRTFCQDDAHIFCRMDQLQEEIAKFMNLLNRVY 416

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
              G     + LSTRP+ R+GS+  WD AE  +   L ++    +  +N G    +GAFY
Sbjct: 417 DKLGMGNYKIFLSTRPDNRMGSEEYWDMAEGALAEALKSLNLPFE--LNPG----DGAFY 470

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK + +  DA+ R WQ GT+QVD NLP  F+  Y    +++  PVM+HRA+ GS+ERFI
Sbjct: 471 GPKLDIMFVDALNRPWQLGTLQVDPNLPQAFDLKYTGEDNKEHRPVMLHRAILGSLERFI 530

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
           G+ +E+  G+LP W+ P+Q  +  +T     + +E+ N LK H + +E D RNE +NYKI
Sbjct: 531 GVYLEHTAGHLPPWMMPVQVAILNVTDRVNSFCEELQNSLKGHSVRVEFDRRNEKLNYKI 590

Query: 596 REHSIKKIPIIIICGDKEASERSIGIR-RFGS 626
           RE  ++KIP +II GDKEA  R++ +R R GS
Sbjct: 591 REAQLQKIPYMIIVGDKEAESRTVSLRLRDGS 622


>gi|323484406|ref|ZP_08089772.1| hypothetical protein HMPREF9474_01523 [Clostridium symbiosum
           WAL-14163]
 gi|323402184|gb|EGA94516.1| hypothetical protein HMPREF9474_01523 [Clostridium symbiosum
           WAL-14163]
          Length = 645

 Score =  562 bits (1449), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 285/632 (45%), Positives = 405/632 (64%), Gaps = 20/632 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K+T  DGS+K +       D+A+ IS  LA+ A A  I+G+  DL   V ++  ++I+T
Sbjct: 2   MKITLKDGSVKEYENQMAVIDIAKDISEGLARMACAGEIDGETVDLRTIVCQDCRLDILT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   LA +RH+ +H+MA+AV+ ++P+ ++AIGP I DGFYYD D   P ++++L +IE
Sbjct: 62  AKDENGLAALRHTASHVMAQAVKRLYPDTKLAIGPSIADGFYYDVDPATPLTAEDLPKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M++II       +  LS E+A  L + K+E YKVE++E +P    ++ YRQGE+ DLC
Sbjct: 122 TEMKKIIKEGLALERFTLSREEAIALMKEKEEPYKVELIEDLPEDAEISFYRQGEFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+ +T  V K FKLM +AGAYWRG     ML+RIY TA+  ++EL  YL  +EE+ K
Sbjct: 182 AGPHLMNTKGVGKAFKLMNLAGAYWRGSEKNKMLTRIYATAFAGKEELESYLRMMEEARK 241

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           RDHRKL RE+ LF + + G G  F+  KG ++  TL+ Y R+   K  Y EI+TP +L++
Sbjct: 242 RDHRKLGRELGLFMMHDAGPGFPFFLPKGMELKNTLLEYWRQIHKKAGYVEISTPVILNR 301

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHWD Y+ NM+       T+ D   +A+KPMNCPG V  +    +SYR+LP+R+
Sbjct: 302 KLWETSGHWDHYKDNMYT------TVIDEEDYAIKPMNCPGGVLAYASEPRSYRDLPLRM 355

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            E G V+R+E SG LHGLMRVR FTQDDAH+F T +Q+ +E   + +LI  +Y  FGF K
Sbjct: 356 GELGLVHRHEKSGQLHGLMRVRCFTQDDAHIFMTPDQIKDEIKGVAHLINEVYSLFGF-K 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +GSD  W+ A   ++  LD +       ++  V  G+GAFYGPK ++ 
Sbjct: 415 YHVELSTRPEDSMGSDEDWEMATEGLRLALDELG------LDYVVNEGDGAFYGPKIDFH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+D+IGR WQCGTIQ+DF LP RF   Y  +  EK  P+MIHR  FGSIERFIGI+IE+F
Sbjct: 469 LEDSIGRTWQCGTIQLDFQLPQRFELEYTGADGEKHRPIMIHRVAFGSIERFIGILIEHF 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P+Q  V  I+    +YA+ +   L+   +  E D R+E I YKIRE   +K
Sbjct: 529 AGAFPTWLAPVQVKVLPISDKYADYAKTVLEELEEAGIRAELDTRSEKIGYKIREAQTQK 588

Query: 603 IPIIIICGDKEASERSIGIR-RF----GSTTT 629
           IP +++ G KE  E ++ +R RF    GS +T
Sbjct: 589 IPYMLVVGQKEEEEGNVSVRSRFAGDEGSDST 620


>gi|256844949|ref|ZP_05550407.1| threonyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
 gi|256718508|gb|EEU32063.1| threonyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
          Length = 637

 Score =  562 bits (1449), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 290/621 (46%), Positives = 408/621 (65%), Gaps = 19/621 (3%)

Query: 11  DGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRS 69
           +G  K F  +    ++A+  S SLAKK+V   ++GK  D+S  +  +  +E I  + P  
Sbjct: 6   NGESKEFNNNINMFEIAKGFSNSLAKKSVGAKVDGKNVDMSYVLDHDADVEFIDIDSPEG 65

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
             ++RHS AH+MA+AV  ++P+ +V IGP+IE+GFYYDFD  + F+ ++L +IE +M+ I
Sbjct: 66  EDIVRHSTAHLMAQAVLRLYPDTKVTIGPVIENGFYYDFDPVEQFTEEDLEKIEAEMKRI 125

Query: 130 IARDSPFLKQYLSHEKARELF-ESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           +  +    K  L  ++A + F +  K  YKVEI+E+IP  E V+ Y+QG++ DLCRG HV
Sbjct: 126 VKENIKLEKYVLPRDEAIDYFRDVDKNKYKVEIVEAIPQGEQVSFYKQGDFTDLCRGTHV 185

Query: 189 RSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRK 248
            STG +K F KL  VAGAYWRG+S   ML RIYG +++ +  L ++L  +EE+EKRDHRK
Sbjct: 186 PSTGYLKAF-KLRTVAGAYWRGNSKNKMLQRIYGYSFSNEDRLKKHLKLMEEAEKRDHRK 244

Query: 249 LAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQ 307
           L +E++LF ++E G G  F+  KG  I   LI   R++  K  Y ++ TP +L++ LW+ 
Sbjct: 245 LGKELELFFLSEYGPGFPFFLPKGMIIRNVLIDLWRKEHEKAGYLQLETPIMLNKELWEI 304

Query: 308 SGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGS 367
           SGHW +YR NM+  +       D   FA+KPMNCPG V  F H L SY++LP RLAE G 
Sbjct: 305 SGHWFNYRENMYTSEI------DELEFAIKPMNCPGGVLSFKHQLHSYKDLPARLAELGR 358

Query: 368 VYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY-KDFGFEKIMVK 426
           V+R+E SG+LHGLMRVR FTQDD+H+F T +Q+ +E + + NLI   Y K FGFE   ++
Sbjct: 359 VHRHEFSGALHGLMRVRSFTQDDSHIFMTPDQVQDEIIGVVNLIDKFYSKLFGFE-YEIE 417

Query: 427 LSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDA 486
           LST+PEK +GS  +WD AE  + G LD +    + +IN G    +GAFYGPK ++ +KDA
Sbjct: 418 LSTKPEKAIGSQEIWDMAEAALAGALDKL--GRKYKINPG----DGAFYGPKLDFKIKDA 471

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNL 546
           IGR WQCGTIQ+DFNLP RF+  Y+    EK  PVM+HR ++GSIERFIGI+IE++ G  
Sbjct: 472 IGRMWQCGTIQLDFNLPERFDVTYIGEDGEKHRPVMLHRVIYGSIERFIGILIEHYAGAF 531

Query: 547 PLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK-KIPI 605
            +WL+P+Q  V T+    + YA+EI + L+   +  E D RNETI YKIRE + K KIP+
Sbjct: 532 SMWLAPVQVKVLTLNDECIPYAKEIMDKLEELGIRAELDDRNETIGYKIREANGKYKIPM 591

Query: 606 IIICGDKEASERSIGIRRFGS 626
            +I G  E   + + IRRFGS
Sbjct: 592 QLIIGKNEVENKEVNIRRFGS 612


>gi|88607718|ref|YP_505783.1| threonyl-tRNA synthetase [Anaplasma phagocytophilum HZ]
 gi|88598781|gb|ABD44251.1| threonyl-tRNA synthetase [Anaplasma phagocytophilum HZ]
          Length = 615

 Score =  562 bits (1448), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 271/623 (43%), Positives = 407/623 (65%), Gaps = 27/623 (4%)

Query: 24  SDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIEIITP---EDPRSLAVIRHSCAHI 80
           SD+ ES+        +AV I+G+VCDL+  +   ++  + P   +    + ++R S A I
Sbjct: 7   SDIVESV--------IAVYIDGEVCDLASTIAASAV--VNPVLIDCEEGINILRKSTAFI 56

Query: 81  MAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQY 140
            A AV S+ P +++A+     DGFY DFD E   S      IEKK++EI+ +D  F+++ 
Sbjct: 57  TAMAVSSVVPNMKLAVCTETSDGFYLDFDSETKLSEKSFEDIEKKIEEIVRKDEKFVRET 116

Query: 141 LSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKL 200
            S ++A   FE+  E Y++EILE    +EN+ +YR G        P V ST  +    KL
Sbjct: 117 WSKKEAITFFENNSETYQLEILEQ-NTQENIIVYRCGSHIFQNHSPLVPSTKYIGAL-KL 174

Query: 201 MKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAE 260
            K++G YW GDS   ML RI G     +++L  Y   LEE+E+RDHRK+A++++ FHI  
Sbjct: 175 TKLSGVYWLGDSKNKMLQRISGVVQENKEKLDAYFKLLEEAERRDHRKIAKDLEWFHIQN 234

Query: 261 DGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHLWQQSGHWDSYRANMF 319
           +  G +FWH KGW +++T+  Y+R+K++++ Y EI TP +LD+ LW++SGHW+ +R NMF
Sbjct: 235 EALGQVFWHDKGWTLYRTIEEYLRKKLRENGYTEIKTPIMLDRKLWEKSGHWEKFRENMF 294

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHG 379
            V  +D   ++L   A+KPMNCP HV +F    +SY++LP+R+AEFG  +RNEPSGSL+G
Sbjct: 295 IV--SDQNSQEL---AIKPMNCPCHVQIFKSKTRSYKDLPIRMAEFGMCHRNEPSGSLYG 349

Query: 380 LMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDA 439
           LMRVRGFTQDDAH+FCT +Q+ +E  K + L++ +Y DFGF+ I VKLS RPE+R+GSD 
Sbjct: 350 LMRVRGFTQDDAHIFCTHDQIRDEVRKFYKLLVEVYNDFGFKNIDVKLSDRPEERIGSDE 409

Query: 440 LWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVD 499
           +WD AE   + ++D++ +     +   +  G+GAFYGPK E+ LKDA+GR+WQCGTIQ+D
Sbjct: 410 MWDMAE---RSLMDSMDDEG---VKYTINKGDGAFYGPKLEFTLKDALGRNWQCGTIQLD 463

Query: 500 FNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTT 559
           F LPSR  A+YV S   K HPVMIHRA+ G++ERFIGI+IE++ GNLP WL+P+Q  + T
Sbjct: 464 FVLPSRLGAYYVGSDGNKHHPVMIHRAILGTLERFIGILIESYAGNLPAWLAPVQLEILT 523

Query: 560 ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSI 619
           + S+A+EYA  +AN  + H++ +E +   E+I  KIR+    KIP++ + G  E ++ ++
Sbjct: 524 VNSNALEYATTLANKAREHNIRVELNSGEESIGQKIRKSIFNKIPVLWVVGSAETADCTV 583

Query: 620 GIRRFGSTTTQKVSLLDAIPILT 642
            +R +G++    +    A+  L 
Sbjct: 584 SVRHYGTSNACSMEADKALKTLV 606


>gi|94264275|ref|ZP_01288069.1| Threonyl-tRNA synthetase, class IIa [delta proteobacterium MLMS-1]
 gi|94270245|ref|ZP_01291687.1| Threonyl-tRNA synthetase, class IIa [delta proteobacterium MLMS-1]
 gi|93450880|gb|EAT01895.1| Threonyl-tRNA synthetase, class IIa [delta proteobacterium MLMS-1]
 gi|93455320|gb|EAT05527.1| Threonyl-tRNA synthetase, class IIa [delta proteobacterium MLMS-1]
          Length = 641

 Score =  561 bits (1447), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 283/611 (46%), Positives = 398/611 (65%), Gaps = 21/611 (3%)

Query: 21  ATGSDVAESISRSLA----KKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRH 75
           A  + VAE +   L+    K+ +A+ +  ++ DL+ P+   G I  +T  DP +L ++RH
Sbjct: 16  AAATPVAEVVRELLSNKERKRTLALRVGQQLYDLTAPLTCGGEIAPLTTADPGALELLRH 75

Query: 76  SCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDS 134
           S AH+MAEAV  ++ PEVQV IGP   DGFYYDFD+ QPF+ D+L +IE +M EI+A D 
Sbjct: 76  SAAHVMAEAVLDLFGPEVQVTIGPATADGFYYDFDRRQPFTPDDLEKIEARMAEIVAADQ 135

Query: 135 PFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQV 194
           PF ++ +S  +A + F ++ + YKVE+L  + A E V+LY QG + DLCRGPH+ STG +
Sbjct: 136 PFERREMSLAQAIDFFTAQGQEYKVELLRELEA-EQVSLYSQGNFVDLCRGPHLPSTGWL 194

Query: 195 KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMD 254
           K F KL ++AGAYWRGD N  ML RIYGTA+  ++EL QYL  LEE+++RDHRKL +E++
Sbjct: 195 KAF-KLTRLAGAYWRGDENNKMLQRIYGTAFFDKKELKQYLAQLEEAKRRDHRKLGKELE 253

Query: 255 LFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWD 312
           LF I E  G G+I W  KG  + + +  Y R++  +  Y+ + TP +  + LWQ SGH D
Sbjct: 254 LFTIQEQIGPGLILWQPKGALLRRLIEDYWRQQHYQHGYDLLYTPHIARRELWQTSGHLD 313

Query: 313 SYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE 372
            Y  NMFA    +D       + LKPMNCP H+A++    +SYRE P+R  E G+VYR E
Sbjct: 314 FYGDNMFAGMDIEDV-----QYQLKPMNCPFHIALYKTRKRSYREFPLRWCELGTVYRFE 368

Query: 373 PSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
            +G+LHGLMRVRGFTQDDAH+FC  EQ+ +E  +I +  + + K FGF    + LSTRPE
Sbjct: 369 KTGALHGLMRVRGFTQDDAHIFCRPEQLEDEIYRILDFNLHVLKAFGFSDYEIYLSTRPE 428

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
           K VGSD  W  A   +K  L+         +   V  GEG FYGPK +  +KD +GR WQ
Sbjct: 429 KYVGSDEHWQQATEALKLALE------HKGLAYSVDPGEGVFYGPKIDIKIKDVLGRAWQ 482

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
           C TIQVDFNLP RF   Y    S +  P+MIHRA+ GS+ERF G++IE++ G  PLWL+P
Sbjct: 483 CSTIQVDFNLPERFKLGYTGEDSGEHRPIMIHRALMGSLERFFGVLIEHYAGAFPLWLAP 542

Query: 553 IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
           +QA +  IT + ++Y  ++   L+   + +E D RNE +NYKIRE  ++KIP +++ GD+
Sbjct: 543 VQARILNITDAQLDYVGKVYEQLRRAGVRVEKDERNEKLNYKIREAQLQKIPYMLVVGDQ 602

Query: 613 EASERSIGIRR 623
           EA++ +I +R+
Sbjct: 603 EAADGTITVRQ 613


>gi|256026433|ref|ZP_05440267.1| threonyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289764445|ref|ZP_06523823.1| threonyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289716000|gb|EFD80012.1| threonyl-tRNA synthetase [Fusobacterium sp. D11]
          Length = 637

 Score =  561 bits (1446), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 289/629 (45%), Positives = 411/629 (65%), Gaps = 19/629 (3%)

Query: 11  DGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRS 69
           +G  K F  +    ++A+  S SLAKK+V   ++GK  D+S  +  +  +E I  + P  
Sbjct: 6   NGESKEFNNNVNMFEIAKGFSNSLAKKSVGAKVDGKNVDMSYVLDHDAEVEFIDIDSPEG 65

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
             ++RHS AH+MA+AV  ++P+ +V IGP+IE+GFYYDFD  + F+ ++L +IE +M++I
Sbjct: 66  EDIVRHSTAHLMAQAVLRLYPDTKVTIGPVIENGFYYDFDPVEQFTEEDLEKIEAEMKKI 125

Query: 130 IARDSPFLKQYLSHEKARELF-ESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           +  +    K  L  ++A + F +  K  YKVEI+E+IP  E V+ Y+QG++ DLCRG HV
Sbjct: 126 VKENIKLEKYVLPRDEAIKYFRDVDKNKYKVEIVEAIPQGEQVSFYKQGDFTDLCRGTHV 185

Query: 189 RSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRK 248
            STG +K F KL  +AGAYWRG+S   ML RIYG +++ + +L ++L  +EE+EKRDHRK
Sbjct: 186 PSTGYLKAF-KLRALAGAYWRGNSKNKMLQRIYGYSFSNEDKLKKHLKLVEEAEKRDHRK 244

Query: 249 LAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQ 307
           L +E++LF ++E G G  F+  KG  +   L+   R++  K  Y ++ TP +L++ LW+ 
Sbjct: 245 LGKELELFFLSEYGPGFPFFLPKGMIVRNVLVDLWRKEHEKAGYLQLETPIMLNKELWEI 304

Query: 308 SGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGS 367
           SGHW +YR NM+  +       D   FA+KPMNCPG V  F H L SY++LP RLAE G 
Sbjct: 305 SGHWFNYRENMYTSEI------DEVEFAIKPMNCPGGVLAFKHQLHSYKDLPARLAELGK 358

Query: 368 VYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY-KDFGFEKIMVK 426
           V+R+E SG+LHGLMRVR FTQDD+H+F T +Q+ +E + + NLI   Y K FGFE   ++
Sbjct: 359 VHRHEFSGALHGLMRVRSFTQDDSHIFMTPDQVQDEIIGVVNLIDKFYSKLFGFE-YEIE 417

Query: 427 LSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDA 486
           LST+PEK +GS  +WD AE+ + G LD +    + +IN G    +GAFYGPK ++ +KDA
Sbjct: 418 LSTKPEKAIGSQEIWDMAESALAGALDKL--GRKYKINPG----DGAFYGPKLDFKIKDA 471

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNL 546
           IGR WQCGTIQ+DFNLP RF+  Y+    EK  PVM+HR ++GSIERFIGI+IE++ G  
Sbjct: 472 IGRMWQCGTIQLDFNLPERFDVTYIGEDGEKHRPVMLHRVIYGSIERFIGILIEHYAGAF 531

Query: 547 PLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK-KIPI 605
           P+WL+P+Q  V TI    V YA+EI   L    +  E D R ETI YKIRE + + +IP+
Sbjct: 532 PMWLAPVQVKVMTINDECVPYAKEIMAKLDKLGIRAELDDRTETIGYKIREANGRYRIPM 591

Query: 606 IIICGDKEASERSIGIRRFGSTTTQKVSL 634
            +I G  E   + + IRRFGS      SL
Sbjct: 592 QLIIGKNEVENKEVNIRRFGSKDQFSKSL 620


>gi|153814564|ref|ZP_01967232.1| hypothetical protein RUMTOR_00778 [Ruminococcus torques ATCC 27756]
 gi|317501270|ref|ZP_07959474.1| threonine-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|145848058|gb|EDK24976.1| hypothetical protein RUMTOR_00778 [Ruminococcus torques ATCC 27756]
 gi|316897337|gb|EFV19404.1| threonine-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA]
          Length = 641

 Score =  561 bits (1445), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 288/630 (45%), Positives = 405/630 (64%), Gaps = 19/630 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K+T  DGS K +    +  ++A  IS  LA+ A A  I+G+  DL   V ++  + I+T
Sbjct: 1   MKITLKDGSSKEYAQPMSVYEIALDISEGLARVATAGEIDGEEVDLRTVVDKDCELNILT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
             D +     RH+ +HIMA+A++ ++P+ ++AIGP I DGFYYD DKE P ++++L +IE
Sbjct: 61  FNDEKGKGAFRHTASHIMAQAIKRLYPDAKLAIGPSIADGFYYDIDKETPLTAEDLDKIE 120

Query: 124 KKMQEIIARDSPFLKQY-LSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
            +M++I+ +++  +KQY +  E+A   F+ K E YKVE++E +P  E ++ Y QGE+ DL
Sbjct: 121 AEMKKIV-KENLEIKQYTMPREEAIAYFKEKNEPYKVELIEDLPEGETISFYSQGEFTDL 179

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPH+ +T  VK F KL  +AGAYWRGD +  ML RIYGTA++ + EL +YL  +EE++
Sbjct: 180 CAGPHLMTTKPVKAF-KLTSLAGAYWRGDEHNKMLQRIYGTAFSKKAELEEYLTMIEEAK 238

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KRDHRKL +E+ LF + E+G G  F+   G  +  TL+ Y R    +  Y EINTP +L 
Sbjct: 239 KRDHRKLGKELGLFMMREEGPGFPFFLPNGMVLKNTLLDYWREIHRRAGYVEINTPIMLS 298

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           +HLW+ SGHWD Y+ NM+       T+ D   FA+KPMNCPG + V+    +SYR+LP+R
Sbjct: 299 RHLWETSGHWDHYKENMYT------TVVDEEDFAIKPMNCPGGILVYESEPRSYRDLPIR 352

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           + E G V+R+E SG LHGLMRVR FTQDDAH+F T EQ+ +E   +  LI  +Y  FGF 
Sbjct: 353 MGELGLVHRHEKSGQLHGLMRVRCFTQDDAHIFMTPEQIKDEIKGVVKLIDEVYSLFGF- 411

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
           K  V+LSTRP+  +GSD  W+ A + ++  LD I       +   V  G+GAFYGPK ++
Sbjct: 412 KYHVELSTRPDDSMGSDEDWEMATDALRSALDDIG------LPYIVNEGDGAFYGPKIDF 465

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L+D+IGR WQCGTIQ+DF LP RF   Y  +  EK  P+MIHR VFGSIERFIGI+IE+
Sbjct: 466 HLEDSIGRTWQCGTIQLDFQLPLRFELEYTGADGEKHRPIMIHRVVFGSIERFIGILIEH 525

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           F G  P WL+P+Q  V  I+   ++YA ++   LK   +  E D R E I YKIRE  +K
Sbjct: 526 FAGAFPTWLAPVQVKVLPISDKYLDYAGKVLEDLKEAGIRAEIDSRAEKIGYKIREAQMK 585

Query: 602 KIPIIIICGDKEASERSIGIR-RFGSTTTQ 630
           KIP +++ G KE  E  + +R RF     Q
Sbjct: 586 KIPYMLVVGAKEEEEGKVSVRSRFAGDEGQ 615


>gi|167040680|ref|YP_001663665.1| threonyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|307724045|ref|YP_003903796.1| threonyl-tRNA synthetase [Thermoanaerobacter sp. X513]
 gi|166854920|gb|ABY93329.1| threonyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|307581106|gb|ADN54505.1| threonyl-tRNA synthetase [Thermoanaerobacter sp. X513]
          Length = 634

 Score =  561 bits (1445), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 291/640 (45%), Positives = 413/640 (64%), Gaps = 16/640 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPE 65
           +   DG+ + F    T  ++A+SIS  LAK+AV    NGKV +L+  + E G +EI+T +
Sbjct: 3   IILKDGTQREFEKGMTVYEIAKSISERLAKEAVGGKFNGKVVELNTKIEEDGKLEILTFD 62

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D     +  H+ +HI+A+AV+ ++ +V++AIGP I++GFYYDFD ++PF++++   IE++
Sbjct: 63  DEEGKKIYWHTSSHILAQAVKRLFKDVKLAIGPAIDNGFYYDFDTDRPFTTEDFEAIEQE 122

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M +II  D    +  L  ++A +L E K E YKVE++E IP  E ++ Y+QGE+ DLC G
Sbjct: 123 MNKIIKEDYKLERFVLPKDEAIKLMEEKGEPYKVELIEEIPEGEEISFYKQGEFTDLCAG 182

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PH+ STG VK   KL+ VAGAYW+GD    ML RIYG ++  +  L QYL+ LEE++KRD
Sbjct: 183 PHLMSTGMVKTI-KLLSVAGAYWKGDEKNKMLQRIYGISFPKKSMLDQYLHMLEEAKKRD 241

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHL 304
           HRKL +E+DLF I  +G G  F+H KG  I   L  + R++ IK  Y+EI TP +L++ L
Sbjct: 242 HRKLGKELDLFSIHPEGPGFPFFHPKGMIIRNILEDFWRKEHIKHGYQEIKTPIILNEEL 301

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHWD Y+ NM+  +       D  T+A+KPMNCPG + V+   + SYR+LP+RL E
Sbjct: 302 WRRSGHWDHYKENMYFTEI------DGETYAIKPMNCPGAMLVYKSTMHSYRDLPLRLCE 355

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
            G V+R+E SG LHGLMRVR FTQDDAH+F T EQ+ +E L + NL+   YK FGFE   
Sbjct: 356 LGLVHRHELSGVLHGLMRVRSFTQDDAHLFMTPEQVEDEILGVINLVDYFYKIFGFE-YF 414

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           V+LSTRPE  +GSD  W+ A N +   L+ +       +   V  G+GAFYGPK ++ LK
Sbjct: 415 VELSTRPENSMGSDEDWELATNALISALNRVN------LPYKVNEGDGAFYGPKIDFHLK 468

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D+IGR WQCGTIQ+DF +P RF   Y+    EK  P+M+HR ++GSIERFIGI+ E+F G
Sbjct: 469 DSIGRTWQCGTIQLDFQMPERFELEYIGPDGEKHRPIMLHRVIYGSIERFIGILTEHFAG 528

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P WL+P+Q  V  I+     YAQ +   L  + +  E D RNE + YKIRE  ++KIP
Sbjct: 529 AFPTWLAPVQVRVLPISDKHYAYAQNVYGRLLENDIRAELDDRNEKVGYKIREAQLQKIP 588

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            ++I GDKE  + ++ +R         +SL + I  + KE
Sbjct: 589 YMLIVGDKEVEQGTVSLRSRKEGDLGAISLSEFIEKILKE 628


>gi|260494526|ref|ZP_05814656.1| threonyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
 gi|260197688|gb|EEW95205.1| threonyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
          Length = 637

 Score =  561 bits (1445), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 289/629 (45%), Positives = 411/629 (65%), Gaps = 19/629 (3%)

Query: 11  DGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRS 69
           +G  K F  +    ++A+  S SLAKK+V   ++GK  D+S  +  +  +E I  + P  
Sbjct: 6   NGESKEFNNNVNMFEIAKGFSNSLAKKSVGAKVDGKNVDMSYVLDHDAEVEFIDIDSPEG 65

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
             ++RHS AH+MA+AV  ++P+ +V IGP+IE+GFYYDFD  + F+ ++L +IE +M++I
Sbjct: 66  EDIVRHSTAHLMAQAVLRLYPDTKVTIGPVIENGFYYDFDPVEQFTEEDLEKIEAEMKKI 125

Query: 130 IARDSPFLKQYLSHEKARELF-ESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           +  +    K  L  ++A + F +  K  YKVEI+E+IP  E V+ Y+QG++ DLCRG HV
Sbjct: 126 VKENIKLEKYVLPRDEAIKYFRDVDKNKYKVEIVEAIPQGEQVSFYKQGDFTDLCRGTHV 185

Query: 189 RSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRK 248
            STG +K F KL  +AGAYWRG+S   ML RIYG +++ + +L ++L  +EE+EKRDHRK
Sbjct: 186 PSTGYLKAF-KLRALAGAYWRGNSKNKMLQRIYGYSFSNEDKLKKHLKLVEEAEKRDHRK 244

Query: 249 LAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQ 307
           L +E++LF ++E G G  F+  KG  +   L+   R++  K  Y ++ TP +L++ LW+ 
Sbjct: 245 LGKELELFFLSEYGPGFPFFLPKGMIVRNVLVDLWRKEHEKAGYLQLETPIMLNKELWEI 304

Query: 308 SGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGS 367
           SGHW +YR NM+  +       D   FA+KPMNCPG V  F H L SY++LP RLAE G 
Sbjct: 305 SGHWFNYRENMYTSEI------DEVEFAIKPMNCPGGVLAFKHQLHSYKDLPARLAELGK 358

Query: 368 VYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY-KDFGFEKIMVK 426
           V+R+E SG+LHGLMRVR FTQDD+H+F T +Q+ +E + + NLI   Y K FGFE   ++
Sbjct: 359 VHRHEFSGALHGLMRVRSFTQDDSHIFMTPDQVQDEIIGVVNLIDKFYSKLFGFE-YEIE 417

Query: 427 LSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDA 486
           LST+PEK +GS  +WD AE+ + G LD +    + +IN G    +GAFYGPK ++ +KDA
Sbjct: 418 LSTKPEKAIGSQEIWDMAESALAGALDKL--GRKYKINPG----DGAFYGPKLDFKIKDA 471

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNL 546
           IGR WQCGTIQ+DFNLP RF+  Y+    EK  PVM+HR ++GSIERFIGI+IE++ G  
Sbjct: 472 IGRMWQCGTIQLDFNLPERFDVTYIGEDGEKHRPVMLHRVIYGSIERFIGILIEHYAGAF 531

Query: 547 PLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK-KIPI 605
           P+WL+P+Q  V TI    V YA+EI   L    +  E D R ETI YKIRE + + +IP+
Sbjct: 532 PMWLAPVQVKVMTINDECVPYAKEIMAKLDELGIRAELDDRTETIGYKIREANGRYRIPM 591

Query: 606 IIICGDKEASERSIGIRRFGSTTTQKVSL 634
            +I G  E   + + IRRFGS      SL
Sbjct: 592 QLIIGKNEVENKEVNIRRFGSKDQFSKSL 620


>gi|310821380|ref|YP_003953738.1| threonyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|309394452|gb|ADO71911.1| Threonyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
          Length = 642

 Score =  560 bits (1444), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 285/653 (43%), Positives = 409/653 (62%), Gaps = 16/653 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSD-VAESISRSLAKKAVAVAINGKVCDLSDPVRE-GS 58
           M   I +T PDGS K      + +D V E I   LAK A+   +NG+  DL+ P+ E   
Sbjct: 1   MSDIITVTLPDGSQKQTARGTSIADFVREGIGAGLAKAALFARVNGQDMDLARPLTEDAK 60

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           ++I T +   +L +IRH  AH++A AVQ ++P  QV IGP  E+GFYYDF +E+PF+ ++
Sbjct: 61  LQIFTTKSTEALELIRHDAAHLVASAVQRLFPGTQVTIGPATEEGFYYDFFREKPFTPED 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK--ENVTLYRQ 176
           L +IE +    IAR+ PF+++ +S E+A  LFE K E +KVEI++ I AK  + +TLY  
Sbjct: 121 LEKIEAEANAEIARNLPFVRKEVSMEEAVRLFEEKGEKFKVEIIQDIAAKGAKTLTLYSH 180

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           G+W D C GPH  STG+V    K++  +GAYWRGD   PML RIYGTA+  ++ L +YL 
Sbjct: 181 GDWVDFCLGPHGPSTGRVG-VIKILSSSGAYWRGDHRNPMLQRIYGTAFLDKKALQEYLT 239

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
            +EES+KRDHRKL +E+DLFH      G  FW  KG  ++QTL  +MRR   +  Y EI 
Sbjct: 240 RIEESKKRDHRKLGKELDLFHFHPFAPGSAFWSPKGTTLYQTLSQWMRRLTAETGYVEIK 299

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP + ++ LW+ SGHW  Y+ NMF V   +    D   F+LKPMNCP H   F     SY
Sbjct: 300 TPLMFNKGLWEASGHWGKYKENMFLVLDNESGEHD---FSLKPMNCPSHHLYFGFKRHSY 356

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           R+LP+RL     ++RNE +GSL GL RVR F QDDAH++CT++Q+ +E  +   L+  +Y
Sbjct: 357 RDLPLRLHTQDVLHRNEAAGSLGGLTRVRQFAQDDAHIYCTEDQIGDEVRRFVKLLDHVY 416

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
              G  K   K STRPE+R+G DALWD AE+ ++GVL T+       +   V  GEGAFY
Sbjct: 417 NAVGL-KYSAKFSTRPEQRLGEDALWDRAESALEGVLKTLG------VPYEVKPGEGAFY 469

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++ + D+IGR WQ GTIQ+D+    RF+  Y+   + +  PV++HRA++GS ERFI
Sbjct: 470 GPKIDFDVSDSIGRKWQLGTIQLDYLAAQRFDLKYIGEDNAEHRPVVLHRAIYGSFERFI 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            I+IE+F G  P WL+PIQA++ T+    ++YA+++ + L++    +E D R +++N KI
Sbjct: 530 AILIEHFAGAFPAWLAPIQAVLVTVADRQLDYARKVRDQLRAKGFRVELDDRGQSLNAKI 589

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
           RE  I+K+P  ++ GD E     +  RR+G    + + L D   +L+KE+  P
Sbjct: 590 REWQIQKLPFTLVIGDNEVEAGGVAPRRYGGEDLKSMKLEDFEALLSKEAALP 642


>gi|319649026|ref|ZP_08003235.1| ThrZ protein [Bacillus sp. BT1B_CT2]
 gi|317389020|gb|EFV69838.1| ThrZ protein [Bacillus sp. BT1B_CT2]
          Length = 639

 Score =  560 bits (1443), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 273/635 (42%), Positives = 424/635 (66%), Gaps = 18/635 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
           S IK+ F +G+ K FP   T   +AESIS +L K AV   ++ K  DLS  + ++  ++I
Sbjct: 4   SLIKVQFKEGNTKEFPKGITIKRIAESISTTLRKHAVVAKVDEKFVDLSYTLDKDVKLDI 63

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
            T +    L+V+RH+  HI+A AV+ ++  V + IGP+IED F+YD   E   S ++L  
Sbjct: 64  FTLDSKEGLSVLRHTSTHILAHAVKRLYSSVSLGIGPVIEDEFFYDLKLEHSLSPEDLLA 123

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE++M++II  +    +  +S+E+A +LFE   E  K+EIL  IP  + +TLY+QGE+ D
Sbjct: 124 IEREMEKIIKENIEIKRIVVSYEEAEKLFEENNEPLKLEILRGIPKGQEITLYQQGEFID 183

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ STG +K F KL +V+GAYWRG+  + +L R+YG A+  + +L +YLYFLE++
Sbjct: 184 LCRGPHLPSTGFIKAF-KLTRVSGAYWRGNRQKEVLQRVYGVAFKKKDDLNEYLYFLEQA 242

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD--YEEINTPQV 299
            K DHR+L +++DLF  +E+  G+ F+  KG +I +  +  + R+++++  Y+E++TP +
Sbjct: 243 AKHDHRQLGKQLDLFMFSEEAPGMPFYLPKG-QIVRKELEKLSRELQNNASYDEVHTPFM 301

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           ++  LW++SGHWD Y+ NM+  +  D+T      FA+KPMNCPGH+ +F + L SYR+LP
Sbjct: 302 MNYRLWEKSGHWDHYQENMYFSEV-DNT-----KFAIKPMNCPGHMLIFKNNLYSYRDLP 355

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +RLAE+G V+R+E SGSL+GL+RVR F QDDAH+F  ++Q+ +E  K+ +LI  +Y+  G
Sbjct: 356 IRLAEYGQVHRHEFSGSLNGLLRVRTFCQDDAHIFVREDQIESEIKKVFHLIDQVYRTIG 415

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           FE   V+LSTRP+  +G++ LW+ +E  +K VLD +       I   V  G+GAFYGPK 
Sbjct: 416 FE-YSVELSTRPDDSLGNNHLWEVSEGSLKNVLDDLA------IKYQVNEGDGAFYGPKI 468

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           ++ +KDA+ R  QCGTIQ+DF +P +F+  Y+N ++EK  PV+IHRA+FGSI+RF GI+I
Sbjct: 469 DFHIKDALKRSHQCGTIQLDFQMPEKFDLTYINHNNEKVRPVVIHRAIFGSIDRFFGILI 528

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E+F G  P+WL+PIQ  +  I+   +EY   I + LK   + ++ +  N+ + YKIRE  
Sbjct: 529 EHFAGAFPVWLAPIQVQIIPISHIHLEYCLGIKSELKQLGIRVQINESNQKLGYKIREAQ 588

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           ++KIP  ++ GD E  E  + +R++G    + VS+
Sbjct: 589 VQKIPYTLVVGDNEIKENGVNVRKYGEEQQKNVSI 623


>gi|332981193|ref|YP_004462634.1| Ser-tRNA(Thr) hydrolase [Mahella australiensis 50-1 BON]
 gi|332698871|gb|AEE95812.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Mahella
           australiensis 50-1 BON]
          Length = 637

 Score =  560 bits (1443), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 277/620 (44%), Positives = 405/620 (65%), Gaps = 16/620 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+   DGSIK +    T + +A  IS  LA++A+A  +NG+V DLS P+ E   + ++T
Sbjct: 2   IKIKLKDGSIKEYSEGITPAQIAADISAGLAREALAALVNGQVMDLSMPIYEDADLALLT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D        H+ +HIMA+AV  ++PE ++AIGP I++GFYYDFD ++PF+ ++L  IE
Sbjct: 62  FDDEDGKKAYWHTTSHIMAQAVLRLFPEAKLAIGPAIDNGFYYDFDIDKPFTPEDLISIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           ++M++II  D    +  L  ++A +  + + + YKVE++E++P    ++ Y+QGE+ DLC
Sbjct: 122 EEMRKIIKEDLSLERFELPRDEAVKFMQERNQPYKVELIEALPENAVISFYKQGEFVDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+ STG++K   KL+ VAGAYWRGD +  ML RIYG ++  +  L +YL  +EE+++
Sbjct: 182 AGPHIPSTGKIKAV-KLLSVAGAYWRGDEHNKMLQRIYGISFPKKSMLDEYLTRIEEAKQ 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQ 302
           RDHRKL +E+DLF + E+G G  F+H KG  I   L  + R++  K  YEEI TP +L++
Sbjct: 241 RDHRKLGQELDLFSLHEEGPGFPFFHPKGMIIRNVLEDFWRKEHRKHGYEEIKTPIILNK 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW QSGHWD Y+ NM+  K  D      + +A+KPMNCPG + ++   + SY+ELP+RL
Sbjct: 301 ELWIQSGHWDHYKDNMYFTKIDD------QDYAIKPMNCPGSMIMYKRTMHSYKELPIRL 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            E G V+R+E SG LHGLMRVR FTQDDAH+F    Q+ +E + + +LI   Y  FGF K
Sbjct: 355 CELGLVHRHEKSGVLHGLMRVRCFTQDDAHIFMLPSQVTDEIIGVIDLIDYFYSLFGF-K 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +G+D  W+ A   +K  L   K     ++N G    +GAFYGPK ++ 
Sbjct: 414 YHVELSTRPEDSMGTDEQWEMATEALKVALG--KKGLDYKVNEG----DGAFYGPKIDFH 467

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+D+IGR WQCGTIQ+DF +P RF+  Y+   SEK  PVM+HR +FGSIERFI I+ E++
Sbjct: 468 LEDSIGRTWQCGTIQLDFQMPERFDLTYIGEDSEKHRPVMLHRVIFGSIERFIAILTEHY 527

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G LP WL+P+Q  +  IT  ++EYA+ +   L+   +  E D RNE I YKIR   I+K
Sbjct: 528 AGALPTWLAPVQVKILPITDRSLEYARSLQMHLEELDIRTELDNRNEKIGYKIRAAQIEK 587

Query: 603 IPIIIICGDKEASERSIGIR 622
           +P +++ GDKE    ++ +R
Sbjct: 588 VPYMLVIGDKEVENVAVSVR 607


>gi|331089982|ref|ZP_08338872.1| threonyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA]
 gi|330402896|gb|EGG82462.1| threonyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA]
          Length = 641

 Score =  560 bits (1443), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 287/624 (45%), Positives = 404/624 (64%), Gaps = 19/624 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K+T  DGS K +    +  ++A  IS  LA+ A A  I+G+  DL   V ++  + I+T
Sbjct: 1   MKITLKDGSSKEYAQPMSVYEIALDISEGLARVATAGEIDGEEVDLRTVVDKDCELNILT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
             D +     RH+ +HIMA+A++ ++P+ ++AIGP I DGFYYD DKE P ++++L +IE
Sbjct: 61  FNDEKGKGAFRHTASHIMAQAIKRLYPDAKLAIGPSIADGFYYDIDKETPLTAEDLDKIE 120

Query: 124 KKMQEIIARDSPFLKQY-LSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
            +M++I+ +++  +KQY +  E+A   F+ K E YKVE++E +P  E ++ Y QGE+ DL
Sbjct: 121 AEMKKIV-KENLEIKQYTMPREEAIAYFKEKNEPYKVELIEDLPEGETISFYSQGEFTDL 179

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPH+ +T  VK F KL  +AGAYWRGD +  ML RIYGTA++ + EL +YL  +EE++
Sbjct: 180 CAGPHLMTTKPVKAF-KLTSLAGAYWRGDEHNKMLQRIYGTAFSKKAELEEYLTMIEEAK 238

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KRDHRKL +E+ LF + E+G G  F+   G  +  TL+ Y R    +  Y EINTP +L 
Sbjct: 239 KRDHRKLGKELGLFMMREEGPGFPFFLPNGMVLKNTLLDYWREIHRRAGYVEINTPIMLS 298

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           +HLW+ SGHWD Y+ NM+       T+ D   FA+KPMNCPG + V+    +SYR+LP+R
Sbjct: 299 RHLWETSGHWDHYKENMYT------TVVDEEDFAIKPMNCPGGILVYESEPRSYRDLPIR 352

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           + E G V+R+E SG LHGLMRVR FTQDDAH+F T EQ+ +E   +  LI  +Y  FGF 
Sbjct: 353 MGELGLVHRHEKSGQLHGLMRVRCFTQDDAHIFMTPEQIKDEIKGVVKLIDEVYSLFGF- 411

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
           K  V+LSTRP+  +GSD  W+ A + ++  LD I       +   V  G+GAFYGPK ++
Sbjct: 412 KYHVELSTRPDDSMGSDEDWEMATDALRSALDDIG------LPYIVNEGDGAFYGPKIDF 465

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L+D+IGR WQCGTIQ+DF LP RF   Y  +  EK  P+MIHR VFGSIERFIGI+IE+
Sbjct: 466 HLEDSIGRTWQCGTIQLDFQLPLRFELEYTGADGEKHRPIMIHRVVFGSIERFIGILIEH 525

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           F G  P WL+P+Q  V  I+   ++YA ++   LK   +  E D R E I YKIRE  +K
Sbjct: 526 FAGAFPTWLAPVQVKVLPISDKYLDYAGKVLEDLKEAGIRAEIDSRAEKIGYKIREAQMK 585

Query: 602 KIPIIIICGDKEASERSIGIR-RF 624
           KIP +++ G KE  E  + +R RF
Sbjct: 586 KIPYMLVVGAKEEEEGKVSVRSRF 609


>gi|255659698|ref|ZP_05405107.1| threonine--tRNA ligase [Mitsuokella multacida DSM 20544]
 gi|260848272|gb|EEX68279.1| threonine--tRNA ligase [Mitsuokella multacida DSM 20544]
          Length = 639

 Score =  560 bits (1442), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 278/644 (43%), Positives = 411/644 (63%), Gaps = 18/644 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K+T  DG+++      +  D  + +S SLAKK +A  ++G+  DL+  + ++  +E +T
Sbjct: 2   LKITMKDGAVREAEAGISIQDFVKQVSNSLAKKVLAAKVDGETKDLTTVLDKDCKVEFLT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIW--PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
            +D      +RH+ +HI+A+AV+ ++    V++AIGP I++GFYYDFD ++  +  +LA 
Sbjct: 62  FDDEDGRWALRHTASHILAQAVKRLYKAANVRLAIGPAIDNGFYYDFDIDRQLTEADLAD 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK+M++I+  +    ++ +S E+A + FE K E YKVE++  +P  E +T+Y QGE+ D
Sbjct: 122 IEKEMKKIVKENLKLERKEVSREEALQFFEEKGETYKVELINDLPEGEKITMYTQGEFTD 181

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LC GPHV STG+VK   KLM +AGAYWRGD +  ML RIYGTA+  Q +L  YL+ LEE+
Sbjct: 182 LCAGPHVVSTGKVKAL-KLMSIAGAYWRGDEHNKMLQRIYGTAFEKQADLDAYLHMLEEA 240

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           +KRDHRKL +++DLF + E+G G  F+H  G  +   LI+Y R    +  Y+EI TP +L
Sbjct: 241 KKRDHRKLGKQLDLFSLHEEGPGFPFFHPNGMIVRNELINYWRDVHRRYGYQEIKTPIIL 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ LW+ SGHWD Y+ NM+  K       D   +A+KPMNCPG + V+N    SYR+LP+
Sbjct: 301 NRQLWETSGHWDHYKENMYFTKI------DGEDYAIKPMNCPGGMLVYNSKQHSYRDLPL 354

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RL E G V+R+E SG LHGL RVR FTQDDAH+F T +Q+  E     +L   +Y  FG 
Sbjct: 355 RLGELGLVHRHEKSGELHGLFRVRNFTQDDAHLFVTPDQVEQEIQHTIDLFDEVYNTFGL 414

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
             +  +LSTRP+  +G+D  W+ A N   G+   +++   D I   V  G+GAFYGPK +
Sbjct: 415 TYV-AELSTRPDDSMGTDEDWELATN---GLRKALEHRGLDYI---VNEGDGAFYGPKID 467

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           + LKD+IGR WQCGTIQ D  +P +FN  YV    EK  P+M+HR V+GSIERFIGI+IE
Sbjct: 468 FHLKDSIGRTWQCGTIQYDMQMPEKFNLTYVGEDGEKHRPIMLHRVVYGSIERFIGILIE 527

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           N+ G  P WL+P+QA +  IT    +YA E+   +    L IE D R+E I  KIRE  +
Sbjct: 528 NYAGAFPTWLAPVQARILPITDKQADYAYELRKKMFDLGLRIEVDDRSEKIGKKIRESQM 587

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            K P  ++ GD+E ++ ++ +R++G   ++ + + D I  L ++
Sbjct: 588 LKTPYSLVVGDQEMADGTVAVRKYGEQQSETMKVEDFIAYLQEQ 631


>gi|268316191|ref|YP_003289910.1| threonyl-tRNA synthetase [Rhodothermus marinus DSM 4252]
 gi|262333725|gb|ACY47522.1| threonyl-tRNA synthetase [Rhodothermus marinus DSM 4252]
          Length = 662

 Score =  560 bits (1442), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 277/648 (42%), Positives = 421/648 (64%), Gaps = 18/648 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           I++TFPDGS + FP   TG ++AE IS  LA++A+A+ +NG+V DL+ P+ E + + I+T
Sbjct: 11  IRITFPDGSERTFPKGITGRELAEQISPRLAREALAIEVNGEVWDLTRPIEEDARVRILT 70

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQI 122
            EDP   AV  HS AH+MAEA+++++P V+  IGP IE GFYYD D   +  S+++LA+I
Sbjct: 71  WEDPEGKAVYWHSTAHLMAEALEALYPGVKFGIGPPIEQGFYYDVDLGGRKLSAEDLARI 130

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E+KM+E+  RD P+ +  +S ++A E F+ K + YKVE++E +     +T YRQG + DL
Sbjct: 131 EEKMRELARRDVPYERIPVSKQEALEYFKKKGDPYKVELIEEL-EDGTITFYRQGNFTDL 189

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG +K   KL+ VAGAYWRGD  RP L+RIYG ++  ++EL  YL+ LEE+ 
Sbjct: 190 CRGPHVPSTGYIKHV-KLLNVAGAYWRGDERRPQLTRIYGISFPKKKELDDYLHRLEEAR 248

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           KRDHR+L RE++LF  ++  G G+  W  +G  + +TLI+++R  +I+  Y+ + TP + 
Sbjct: 249 KRDHRRLGRELELFTFSQKVGPGLPLWLPRGATLRETLINFLREEQIRRGYQPVVTPHIA 308

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
              L++ SGH+  Y+ + F     +    +   + LKPMNCP H+ ++    +SYRELP+
Sbjct: 309 RLELYKTSGHYPYYKDSQFPPMIENPETGE--GYLLKPMNCPHHIMIYADRPRSYRELPL 366

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLAEFG VYR E +G L GL RVRGFT DDAH+FC  +Q+ +E   + +L + +++  GF
Sbjct: 367 RLAEFGQVYRYEQTGELSGLTRVRGFTIDDAHIFCRPDQVKDEFKNVIDLTLYVFRSLGF 426

Query: 421 EKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           ++   ++S R     EK VG D LW+ AE  ++      + +++  +     LGE AFYG
Sbjct: 427 DEFEAQISLRDPNNREKYVGDDELWEQAEQAIR------EAAAEMGLQATEELGEAAFYG 480

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK +++++DA+GR WQ GT+Q+D+ LP RF+ +Y+ + ++K  PVMIHRA FGS+ERFIG
Sbjct: 481 PKLDFMVRDALGRRWQLGTVQLDYILPERFDLYYIGADNQKHRPVMIHRAPFGSLERFIG 540

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           ++IE+  GN PLWL+P+Q  V  ++    +YA+ +   L      +E D R ETI YKIR
Sbjct: 541 VLIEHCAGNFPLWLAPVQVAVLPLSDELNDYAEAVGRRLLEAGFRVEVDTRTETIGYKIR 600

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  ++KIP ++I G +E    ++ +R+ G       +L + I  L  E
Sbjct: 601 QAEVQKIPYMLIVGRREREAGTVAVRKHGEGDQGPATLDEFIERLRTE 648


>gi|167769368|ref|ZP_02441421.1| hypothetical protein ANACOL_00694 [Anaerotruncus colihominis DSM
           17241]
 gi|167668336|gb|EDS12466.1| hypothetical protein ANACOL_00694 [Anaerotruncus colihominis DSM
           17241]
          Length = 635

 Score =  560 bits (1442), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 282/630 (44%), Positives = 403/630 (63%), Gaps = 21/630 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           I +T  DG +K +    T ++VA+S+   L K A A  ++GK  DL  P+  + ++ I+T
Sbjct: 3   INVTLKDGVVKQYEQGTTAAEVAKSLGAGLYKAACAAKVDGKAVDLRTPLESDCTLSILT 62

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            + P       H+ +H++A+AV  ++P+ +  IGP +E+GFYYDFD E+PF+ ++LA IE
Sbjct: 63  FDAPEGKHAFWHTASHVLAQAVMRLYPDTKYTIGPAVENGFYYDFDVEKPFTPEDLAAIE 122

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-ENVTLYRQGEWFDL 182
           K+M  I+       +  L   +AREL   K + YK+E+++   A  E V+ YRQ ++ DL
Sbjct: 123 KEMAAIVKSGVELDRFELDAPQARELM--KDQPYKLELIDKHAASGEKVSFYRQNDFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPH+ +   +K   KL++  GAYW GDS+  ML R+YG A+    EL+ YL+ LEE++
Sbjct: 181 CAGPHLMNVAPLKAI-KLLQSTGAYWHGDSSNKMLCRVYGIAFPKASELSDYLHMLEEAK 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLD 301
           +RDHRKL RE+DLF I E+G G  F+  KG  +   L S+ R +  K  Y+EI TP +L+
Sbjct: 240 RRDHRKLGRELDLFDIYEEGPGFPFFFPKGMILRNLLESFWREEHQKHGYQEIRTPLILN 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW +SGHWD Y+ NM+  K  D      R +A+KPMNCPG + V+   + SYR+LP R
Sbjct: 300 EELWHRSGHWDHYKDNMYTTKIDD------RDYAIKPMNCPGGILVYKRRMNSYRDLPQR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAE G V+R+E SG+LHGLMRVR FTQDDAH+F T +Q+  E L + NLI SIY+ FGF+
Sbjct: 354 LAELGIVHRHELSGALHGLMRVRCFTQDDAHIFMTPDQIEAEVLGVINLIDSIYRVFGFD 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
             + +LSTRPE  +GS+  W+ A   ++  L+   N     +N G    +GAFYGPK ++
Sbjct: 414 YFL-ELSTRPEDSMGSEEQWETATAALRKALE--DNGRPYTVNEG----DGAFYGPKIDF 466

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L+D+IGR WQCGTIQ+DF +P RF+  Y+ S  E+  PVM+HR  FGSIERFIGI+IE+
Sbjct: 467 HLRDSIGRTWQCGTIQLDFQMPERFDLAYIGSDGERHRPVMVHRTAFGSIERFIGILIEH 526

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  PLWL+P+Q  V  +T   + YAQ +A+ L    L IE D RNE + Y+IRE  ++
Sbjct: 527 YAGAFPLWLAPVQIKVLPVTDEHIPYAQSVADTLTRAGLRIELDSRNEKVGYRIREAQLQ 586

Query: 602 KIPIIIICGDKEASERSIGI--RRFGSTTT 629
           KIP +++ G KEA    + +  RR G TTT
Sbjct: 587 KIPYMLVLGGKEAESGEVAVRDRRDGKTTT 616


>gi|291060195|gb|ADD72930.1| threonyl-tRNA synthetase [Treponema pallidum subsp. pallidum str.
           Chicago]
          Length = 582

 Score =  559 bits (1440), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 265/560 (47%), Positives = 374/560 (66%), Gaps = 20/560 (3%)

Query: 69  SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQE 128
           +L  +RHS AH+MAEAVQ+++P  ++A+GP I+ GFYYDF   +P    +LA IE+KM+ 
Sbjct: 8   TLDRLRHSLAHVMAEAVQALFPGTKLAVGPPIDYGFYYDFSPPRPLCDADLAPIEEKMRA 67

Query: 129 IIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           I+    PF+K+ +S   A   F  K E +K E++E I A + ++LY  G + DLCRGPHV
Sbjct: 68  ILRAGCPFVKEVVSRPDALARF--KDEPFKQELIERISADDTLSLYHSGAFTDLCRGPHV 125

Query: 189 RSTGQVKKF-FKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHR 247
           +S   +    FKL  +AGAYWRG+   P L+RIYGTAW ++++L  YL   +E+++RDHR
Sbjct: 126 QSMRDINPHAFKLTSIAGAYWRGNERGPQLTRIYGTAWESEEDLHTYLRMQDEAKRRDHR 185

Query: 248 KLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHLWQ 306
           KL   + LFH+ E+  G +FWH +GW ++  +  Y+RR + +D Y E++TP V+ Q LW+
Sbjct: 186 KLGPALGLFHLDEENPGQVFWHPEGWTLYVAIQQYLRRVMHEDGYAEVHTPFVMPQSLWE 245

Query: 307 QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFG 366
           +SGHWD YRANM+       T  + R+FALKPMNCPGHV +F    +SYR+LP+RL+EFG
Sbjct: 246 RSGHWDKYRANMYL------TEGEKRSFALKPMNCPGHVEIFKQKTRSYRDLPLRLSEFG 299

Query: 367 SVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF--EKIM 424
           S  RNEPSGSLHG+MRVRGF QDDAH+FCT+ Q+ +E  +   L+  +Y DFGF  E+I 
Sbjct: 300 SCTRNEPSGSLHGVMRVRGFVQDDAHIFCTEAQIASEVTRFCRLLARVYADFGFAQEQIR 359

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           VK STRPE+R+G DA WD AE  +    +    S +         GEGAFYGPK E+ L 
Sbjct: 360 VKFSTRPEQRIGDDATWDRAERALAEACEAAGLSYEH------APGEGAFYGPKLEFALI 413

Query: 485 DAIGRDWQCGTIQVDFNLPS--RFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           D + R+WQCGTIQVD+ LPS  R NA YV   +++  PV++HR V GS+ERFIGI+IE++
Sbjct: 414 DTLEREWQCGTIQVDYQLPSCERLNAEYVGEDNQRHMPVILHRTVIGSLERFIGILIEHY 473

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P+QA+V  +  + +EYAQ +A  L +  L ++ D   E +N KIR    +K
Sbjct: 474 GGAFPPWLAPVQAVVIPVAPAFLEYAQHVARELCARSLRVQADVSAERMNAKIRTAQTQK 533

Query: 603 IPIIIICGDKEASERSIGIR 622
           +P ++I G++E   + + +R
Sbjct: 534 VPYLLIVGERELRAQQVAVR 553


>gi|313891921|ref|ZP_07825522.1| threonine--tRNA ligase [Dialister microaerophilus UPII 345-E]
 gi|329121028|ref|ZP_08249659.1| threonine--tRNA ligase [Dialister micraerophilus DSM 19965]
 gi|313119564|gb|EFR42755.1| threonine--tRNA ligase [Dialister microaerophilus UPII 345-E]
 gi|327471190|gb|EGF16644.1| threonine--tRNA ligase [Dialister micraerophilus DSM 19965]
          Length = 634

 Score =  559 bits (1440), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 275/620 (44%), Positives = 403/620 (65%), Gaps = 16/620 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           I +   DGS  +F    T  +VA+ ISRSLAK+A+   ++G V DL + +++G+ IE  T
Sbjct: 2   ITIELKDGSKLSFEEPITLFEVAKKISRSLAKEALVAKVDGNVTDLRNLIKDGTKIEFCT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
             DP  LA +RH+ AH+MA+A+Q ++P  + AIGP I  GFYYD + E  F  ++   IE
Sbjct: 62  KNDPEGLAALRHTAAHVMAQAIQHLYPGTKFAIGPAISTGFYYDIESEHVFKQEDFPAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M +II ++    K+ +S ++A + F++K++ YK+ ++  +P    +++Y QG++ DLC
Sbjct: 122 KEMSKIIKQNLHLDKKVVSRKEALDFFKNKEQDYKILLINDMPEDTELSIYTQGDYDDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RG HV +TG++K F KL+ VAGAYWRGD N  ML RIYGTA+  +++L  +L+   E+EK
Sbjct: 182 RGGHVDNTGKIKAF-KLLSVAGAYWRGDENNVMLQRIYGTAFFNKEDLEHFLFVRSEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQ 302
           RDHRKL +++DLF   E+G G  F+H KG  I   LI Y R    K  YEEI TP +L +
Sbjct: 241 RDHRKLGKQLDLFSFHEEGPGFPFFHPKGMVIRNLLIDYERELFRKYGYEEIVTPIILSK 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
           +LW QSGHWD YR NM+  K       D   +A+KPMNCPG +  F    +SYR+LP R+
Sbjct: 301 NLWLQSGHWDHYRENMYFTKI------DNEDYAVKPMNCPGGILYFKTQQRSYRDLPKRV 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG V+R+E  G+LHGL RVR FTQDDAH+F T + M +E + + N+   +Y  FG  K
Sbjct: 355 GEFGLVHRHELHGALHGLFRVRNFTQDDAHIFMTPKDMESEVISVVNMFKELYDVFGL-K 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             ++LSTRPE  +GSD LW+ A N ++  +++   S   RIN G    +GAFYGPK ++ 
Sbjct: 414 YHIELSTRPENSMGSDELWEIATNALRNAIESTNVSY--RINEG----DGAFYGPKLDFH 467

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           ++D++GR WQCGTIQ+D  LP RF+  YV    EK   VMIHRA +GS+ERFIGI+IE++
Sbjct: 468 IEDSLGRTWQCGTIQMDMQLPERFDVTYVGEDGEKHRAVMIHRAGYGSLERFIGILIEHY 527

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P W +P+Q  +  ++ +   YAQE+   +    + +E D  N+T+ YKIR+  ++K
Sbjct: 528 AGAFPTWCAPVQVKIIPVSENYHNYAQEVYKKMFEQGIRVEIDKGNDTLGYKIRKAQMEK 587

Query: 603 IPIIIICGDKEASERSIGIR 622
           IP +++ G+KE++  +I +R
Sbjct: 588 IPYMVVVGEKESNSGNISVR 607


>gi|21672408|ref|NP_660475.1| threonyl-tRNA synthetase [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
 gi|22654285|sp|P46244|SYT_BUCAP RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|21623017|gb|AAM67686.1| threonyl-tRNA synthetase [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
          Length = 642

 Score =  558 bits (1438), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 265/624 (42%), Positives = 409/624 (65%), Gaps = 26/624 (4%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPE 65
           + F DGS + +    +  ++ E+   ++ +  +A+++N    + +  + E  SI  I+ +
Sbjct: 4   IRFCDGSQQVYKHSVSLREIIENKKPNIIRSLIAISVNNSFSNFNTLITEDSSISFISKK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D  +L +IR+SC  ++  A +  WP  ++    I + GFY D D E   + ++   +E  
Sbjct: 64  DCEALNIIRYSCIQLLNYAAKKTWPSCKIGESEITKSGFYCDIDFENSITEEDFFILENN 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENV-TLYRQGEWFDLCR 184
           M+ +I R+     Q +S + A E+F+ K E YK+ +++    K+N  +LY    +FD+  
Sbjct: 124 MKTLIKREYFISHQNISFDHAYEMFKKKSEIYKIHLIKKYINKKNKISLYYHENYFDIDM 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           G  V +  +  K+FKL K+ G YW+GD    ML RIYGTAW+T++EL ++L ++ E +KR
Sbjct: 184 GMQVFNI-KFCKYFKLQKIGGIYWKGDHKNKMLQRIYGTAWSTKKELDKHLSYINELKKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ + ++L+H+ ++  G+IFWH  GW IF  L  ++R K+K+  Y+E+ TP ++D+ 
Sbjct: 243 DHRKIGKLLNLYHMQKESPGMIFWHNNGWIIFNELEIFVREKLKEYKYKEVKTPLLIDKS 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           +WQ+SGHWD+Y+  +F       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 IWQKSGHWDNYQDAIFT------TSSENREYCIKPMNCPGHVQIFNCGLKSYRDLPIRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM---FNECLKIHNLIISIYKDFGF 420
           EFGS +RNE SGSLHGLMR+R FTQDDAH+FCT+EQ+    N C+K   +I  +Y  F F
Sbjct: 357 EFGSCHRNESSGSLHGLMRIRNFTQDDAHIFCTQEQLRYEINNCIK---MIYDLYSTFNF 413

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVL--DTIKNSSQDRINTGVLLGEGAFYGPK 478
           +KI+VK STRP+KR+G +++WD AE  +  VL  + +K   Q+        GEGAFYGPK
Sbjct: 414 KKILVKFSTRPKKRIGDESVWDQAEKDLSDVLIENNLKFEHQE--------GEGAFYGPK 465

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E++L+D++ R+WQCGTIQ+DF LP R  +FY++ H+ +  P++IHRA+ GSIERFIGI+
Sbjct: 466 IEFVLQDSLDRNWQCGTIQLDFYLPIRLRSFYIDEHNHQKIPIIIHRAILGSIERFIGIL 525

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE F G LP WLSPIQ ++ +IT S + Y ++I       ++ +E+D RNE I +KIREH
Sbjct: 526 IEEFSGKLPTWLSPIQVVILSITDSHINYVKKIVQHFSDINIRVESDLRNEKIGFKIREH 585

Query: 599 SIKKIPIIIICGDKEASERSIGIR 622
           ++++IP I+ICG+KE   + I +R
Sbjct: 586 TLRQIPYILICGEKEIKSKKISVR 609


>gi|300914721|ref|ZP_07132037.1| Threonyl/alanyl tRNA synthetase SAD [Thermoanaerobacter sp. X561]
 gi|300889656|gb|EFK84802.1| Threonyl/alanyl tRNA synthetase SAD [Thermoanaerobacter sp. X561]
          Length = 634

 Score =  558 bits (1438), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 290/640 (45%), Positives = 412/640 (64%), Gaps = 16/640 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPE 65
           +   DG+ + F    T  ++ +SIS  LAK+AV    NGKV +L+  + E G +EI+T +
Sbjct: 3   IILKDGTQREFEKGMTVYEIDKSISERLAKEAVGGKFNGKVVELNTKIEEDGKLEILTFD 62

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D     +  H+ +HI+A+AV+ ++ +V++AIGP I++GFYYDFD ++PF++++   IE++
Sbjct: 63  DEEGKKIYWHTSSHILAQAVKRLFKDVKLAIGPAIDNGFYYDFDTDRPFTTEDFEAIEQE 122

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M +II  D    +  L  ++A +L E K E YKVE++E IP  E ++ Y+QGE+ DLC G
Sbjct: 123 MNKIIKEDYKLERFVLPKDEAIKLMEEKGEPYKVELIEEIPEGEEISFYKQGEFTDLCAG 182

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PH+ STG VK   KL+ VAGAYW+GD    ML RIYG ++  +  L QYL+ LEE++KRD
Sbjct: 183 PHLMSTGMVKTI-KLLSVAGAYWKGDEKNKMLQRIYGISFLKKSMLDQYLHMLEEAKKRD 241

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHL 304
           HRKL +E+DLF I  +G G  F+H KG  I   L  + R++ IK  Y+EI TP +L++ L
Sbjct: 242 HRKLGKELDLFSIHPEGPGFPFFHPKGMIIRNILEDFWRKEHIKHGYQEIKTPIILNEEL 301

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHWD Y+ NM+  +       D  T+A+KPMNCPG + V+   + SYR+LP+RL E
Sbjct: 302 WRRSGHWDHYKENMYFTEI------DGETYAIKPMNCPGAMLVYKSTMHSYRDLPLRLCE 355

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
            G V+R+E SG LHGLMRVR FTQDDAH+F T EQ+ +E L + NL+   YK FGFE   
Sbjct: 356 LGLVHRHELSGVLHGLMRVRSFTQDDAHLFMTPEQVEDEILGVINLVDYFYKIFGFE-YF 414

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           V+LSTRPE  +GSD  W+ A N +   L+ +       +   V  G+GAFYGPK ++ LK
Sbjct: 415 VELSTRPENSMGSDEDWELATNALISALNRVN------LPYKVNEGDGAFYGPKIDFHLK 468

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D+IGR WQCGTIQ+DF +P RF   Y+    EK  P+M+HR ++GSIERFIGI+ E+F G
Sbjct: 469 DSIGRTWQCGTIQLDFQMPERFELEYIGPDGEKHRPIMLHRVIYGSIERFIGILTEHFAG 528

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P WL+P+Q  V  I+     YAQ +   L  + +  E D RNE + YKIRE  ++KIP
Sbjct: 529 AFPTWLAPVQVRVLPISDKHYAYAQNVYGRLLENDIRAELDERNEKVGYKIREAQLQKIP 588

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            ++I GDKE  + ++ +R         +SL + I  + KE
Sbjct: 589 YMLIVGDKEVEQGTVSLRSRKEGDLGAISLSEFIEKILKE 628


>gi|313673284|ref|YP_004051395.1| ser-tRNA(thr) hydrolase; threonyl-tRNA synthetase [Calditerrivibrio
           nitroreducens DSM 19672]
 gi|312940040|gb|ADR19232.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Calditerrivibrio
           nitroreducens DSM 19672]
          Length = 640

 Score =  558 bits (1438), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 277/627 (44%), Positives = 410/627 (65%), Gaps = 17/627 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           +++  PD +       AT +DVA+ IS  L K+A+A  +NG + DLS  V++G  + IIT
Sbjct: 1   MEIVLPDKNKVLLENDATVADVAKKISEGLFKRAIAGRVNGNLVDLSTKVKDGDQVTIIT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +DP ++ ++RHS AH+MA+AVQ ++ +V+V IGP I+DGFYYDFD + PF  ++L +IE
Sbjct: 61  EKDPEAIDILRHSTAHLMAQAVQRLFKDVKVTIGPTIQDGFYYDFDIDTPFKEEDLEKIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           + M +I  +D P +++ L+ E A +LF    E YKVEI+  +  ++ V++Y QG++ DLC
Sbjct: 121 QVMADIARQDLPIIRKELTKEDAIKLFSEMGETYKVEIINDL-GEDVVSVYSQGDFVDLC 179

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG +K F KL+ VAGAYWRGD    ML RIYGTAW  + EL +YL  LEE++K
Sbjct: 180 RGPHLPSTGFIKHF-KLLSVAGAYWRGDEKNKMLQRIYGTAWFKKSELDEYLNRLEEAKK 238

Query: 244 RDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLD 301
           RDHR+L +E++LF   ++ GSG+I W  KG K+  T+  + RR+  K+ Y+ + TP +  
Sbjct: 239 RDHRRLGKELELFGTFDEIGSGLICWMPKGAKVRATIEEFWRREHFKNGYDLLYTPHIGK 298

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
            +LWQ SGH D Y  NM++    +      + + +KPMNCP H+ ++    +SYR+LP+R
Sbjct: 299 SNLWQTSGHLDFYSENMYSPMDIEG-----QNYYIKPMNCPFHIMIYKSKNRSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
            AE G+VYR E SG LHGL+RVRGFTQDDAH+ C ++Q+  E  ++    + I+K FGF 
Sbjct: 354 WAELGTVYRYERSGVLHGLLRVRGFTQDDAHIICAQDQIVEEIEEVLKFSLDIWKTFGFT 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            I   ++TRPEK VG D++W  A +    ++++IK S    I   +  G GAFYGPK + 
Sbjct: 414 SIKGYIATRPEKSVGDDSMWKAATD---SLMESIKKSG---IEYEIDEGGGAFYGPKIDL 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDAIGR+WQ  TIQ DFNLP RF+  YV+   ++  P M+HRA+ GS+ERF G++IE+
Sbjct: 468 KVKDAIGREWQMTTIQFDFNLPERFDMVYVDRDGKEKRPYMVHRALLGSLERFFGVLIEH 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  P WL+P+Q  +  I+    +Y +++   LK+    +E D RNE I YKIRE  + 
Sbjct: 528 YAGAFPFWLAPVQIKIMNISDEQADYCEQLYRRLKAEGFRVEMDLRNEKIGYKIREAQLF 587

Query: 602 KIPIIIICGDKEASERSIGIR-RFGST 627
           K+P +I+ G++E  +  + +R R G T
Sbjct: 588 KVPHMIVIGNQEKEKNHVSVRLRNGET 614


>gi|256751279|ref|ZP_05492159.1| threonyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
 gi|256749834|gb|EEU62858.1| threonyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
          Length = 634

 Score =  558 bits (1438), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 289/640 (45%), Positives = 413/640 (64%), Gaps = 16/640 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPE 65
           +   DG+ + F    T  ++A+SIS  LAK+AV    NGKV +L+  + E G +EI+T +
Sbjct: 3   IILKDGTQREFEKGMTVYEIAKSISERLAKEAVGGKFNGKVVELNTKIEEDGKLEILTFD 62

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D     +  H+ +HI+A+AV+ ++ +V++AIGP I++GFYYDFD ++PF++++   IE++
Sbjct: 63  DEEGKKIYWHTSSHILAQAVKRLFKDVKLAIGPAIDNGFYYDFDTDRPFTTEDFEAIEQE 122

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M +II  D    +  L  ++A +L E K E YKVE++E IP  E ++ Y+QGE+ DLC G
Sbjct: 123 MNKIIKEDYKLERFVLPKDEAIKLMEEKGEPYKVELIEEIPEGEEISFYKQGEFTDLCAG 182

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PH+ STG VK   KL+ VAGAYW+GD    ML RIYG ++  +  L +YL+ LEE++KRD
Sbjct: 183 PHLMSTGMVKTI-KLLSVAGAYWKGDEKNKMLQRIYGISFPKKSMLDEYLHMLEEAKKRD 241

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHL 304
           HRKL +E+DLF I  +G G  F+H KG  I   L  + R++ +K  Y+EI TP +L++ L
Sbjct: 242 HRKLGKELDLFSIHPEGPGFPFFHPKGMIIRNILEDFWRKEHMKHGYQEIKTPIILNEEL 301

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHWD Y+ NM+  +       D  T+A+KPMNCPG + V+   + SYR+LP+RL E
Sbjct: 302 WRRSGHWDHYKENMYFTEI------DGETYAIKPMNCPGAMLVYKSTMHSYRDLPLRLCE 355

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
            G V+R+E SG LHGLMRVR FTQDDAH+F T EQ+ +E L + NL+   YK FGFE   
Sbjct: 356 LGLVHRHELSGVLHGLMRVRSFTQDDAHLFMTPEQVEDEILGVINLVDYFYKIFGFE-YF 414

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           V+LSTRPE  +GSD  W+ A N +   L+ +       +   V  G+GAFYGPK ++ LK
Sbjct: 415 VELSTRPENSMGSDEDWELATNALISALNRVN------LPYKVNEGDGAFYGPKIDFHLK 468

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D+IGR WQCGTIQ+DF +P RF   Y+    EK  P+M+HR ++GSIERFIGI+ E+F G
Sbjct: 469 DSIGRTWQCGTIQLDFQMPERFELEYIGPDGEKHRPIMLHRVIYGSIERFIGILTEHFAG 528

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P WL+P+Q  V  I+     YAQ +   L  + +  E D RNE + YKIRE  ++KIP
Sbjct: 529 AFPTWLAPVQVRVLPISDKHYAYAQNVYGRLLENDIRAELDDRNEKVGYKIREAQLQKIP 588

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            ++I GDKE  + ++ +R         +SL + I  + KE
Sbjct: 589 YMLIVGDKEVEQGTVSLRSRKEGDLGAISLNEFIEKILKE 628


>gi|308173840|ref|YP_003920545.1| threonyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|307606704|emb|CBI43075.1| threonyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
          Length = 642

 Score =  558 bits (1438), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 279/645 (43%), Positives = 421/645 (65%), Gaps = 21/645 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           I +TFP+G  K +    T  ++A+SIS  L K + A  +NG + DL   + E   IE+ +
Sbjct: 6   IVITFPNGKQKEYEKGITLEEIAQSISPGLKKTSAAGKVNGSLYDLGRSIHEDAEIELCS 65

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +    L V+RH+ AH++A+AV+ ++P+V + IGP+IE+GFYYDFD +   +  +L  IE
Sbjct: 66  FQSEEGLEVMRHTAAHVLAQAVKRLYPKVCLGIGPVIENGFYYDFDMDDTITEKDLPVIE 125

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M  II+ +    ++ +S E+A +LF    +  K+E+L  IP  + V++YRQ E+ DLC
Sbjct: 126 KEMNRIISENPKITREEISREEAEQLF--AHDPLKLELLADIPQTDTVSIYRQSEFVDLC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ S GQ+K F  L  V+GAYWRGDSN+ M+ RIYG A+ +++EL ++   L+E+EK
Sbjct: 184 RGPHLASVGQIKAF-SLTHVSGAYWRGDSNQKMMQRIYGKAFASKKELNRHFQLLKEAEK 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           R+HRKL  E+ LF  +E+  G+ F+   G  I  TL S++R K     Y+E+ TP +++Q
Sbjct: 243 RNHRKLGAELQLFMFSEEAPGMPFYLPNGQFIRNTLESFLRSKQDAYHYQEVRTPMMMNQ 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+QSGHWD Y+ NM+  +       D + FALKPMNCPGH+ +F   L+SYRELP+R+
Sbjct: 303 RLWEQSGHWDHYKENMYFSEA------DQQRFALKPMNCPGHMLIFKERLRSYRELPIRM 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFG V+R+E SG+L+GL+RVR F QDDAH+F T EQ+ +E      LI  +Y  FGF  
Sbjct: 357 AEFGQVHRHEFSGALNGLLRVRSFCQDDAHIFVTPEQIESEIASALQLIHEVYTAFGF-S 415

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD-RINTGVLLGEGAFYGPKFEY 481
             ++LSTRPE  +GS+ LWD AE+ ++ VL   K    D R N     G+GAFYGPK + 
Sbjct: 416 YDIELSTRPEDYMGSEHLWDRAESALERVL---KEQGYDFRFNR----GDGAFYGPKIDI 468

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+ R  QC T+Q+DF +P +F+  Y++  ++K  PV+IHRAVFGS++RF+GI+ E+
Sbjct: 469 HIKDALNRSHQCATVQLDFQMPEKFDLTYIDEKNQKVRPVVIHRAVFGSLDRFLGIITEH 528

Query: 542 FKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           + G  PLWL+P+QA +  ++++A  + A+++   +K   +  E D R+E + YKIRE  +
Sbjct: 529 YGGAFPLWLAPVQAKIIPVSNTAHRDCAEQVHRQMKKAGIRAELDQRDEKLGYKIREAQM 588

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           KKIP I + GD+E    ++ +R++G   T + S+ D I  +  E+
Sbjct: 589 KKIPYIAVVGDQECRHHTVHVRQYGQENTFEESVSDFISRIINET 633


>gi|15639823|ref|NP_219273.1| threonyl-tRNA synthetase [Treponema pallidum subsp. pallidum str.
           Nichols]
 gi|189026061|ref|YP_001933833.1| threonyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14]
 gi|6094415|sp|O83809|SYT_TREPA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|238689347|sp|B2S475|SYT_TREPS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|3323150|gb|AAC65804.1| threonyl-tRNA synthetase (thrS) [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189018636|gb|ACD71254.1| threonyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14]
          Length = 592

 Score =  558 bits (1438), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 265/560 (47%), Positives = 374/560 (66%), Gaps = 20/560 (3%)

Query: 69  SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQE 128
           +L  +RHS AH+MAEAVQ+++P  ++A+GP I+ GFYYDF   +P    +LA IE+KM+ 
Sbjct: 18  TLDRLRHSLAHVMAEAVQALFPGTKLAVGPPIDYGFYYDFSPPRPLCDADLAPIEEKMRA 77

Query: 129 IIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           I+    PF+K+ +S   A   F  K E +K E++E I A + ++LY  G + DLCRGPHV
Sbjct: 78  ILRAGCPFVKEVVSRPDALARF--KDEPFKQELIERISADDTLSLYHSGAFTDLCRGPHV 135

Query: 189 RSTGQVKKF-FKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHR 247
           +S   +    FKL  +AGAYWRG+   P L+RIYGTAW ++++L  YL   +E+++RDHR
Sbjct: 136 QSMRDINPHAFKLTSIAGAYWRGNERGPQLTRIYGTAWESEEDLHTYLRMQDEAKRRDHR 195

Query: 248 KLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHLWQ 306
           KL   + LFH+ E+  G +FWH +GW ++  +  Y+RR + +D Y E++TP V+ Q LW+
Sbjct: 196 KLGPALGLFHLDEENPGQVFWHPEGWTLYVAIQQYLRRVMHEDGYAEVHTPFVMPQSLWE 255

Query: 307 QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFG 366
           +SGHWD YRANM+       T  + R+FALKPMNCPGHV +F    +SYR+LP+RL+EFG
Sbjct: 256 RSGHWDKYRANMYL------TEGEKRSFALKPMNCPGHVEIFKQKTRSYRDLPLRLSEFG 309

Query: 367 SVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF--EKIM 424
           S  RNEPSGSLHG+MRVRGF QDDAH+FCT+ Q+ +E  +   L+  +Y DFGF  E+I 
Sbjct: 310 SCTRNEPSGSLHGVMRVRGFVQDDAHIFCTEAQIASEVTRFCRLLARVYADFGFAQEQIR 369

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           VK STRPE+R+G DA WD AE  +    +    S +         GEGAFYGPK E+ L 
Sbjct: 370 VKFSTRPEQRIGDDATWDRAERALAEACEAAGLSYEH------APGEGAFYGPKLEFALI 423

Query: 485 DAIGRDWQCGTIQVDFNLPS--RFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           D + R+WQCGTIQVD+ LPS  R NA YV   +++  PV++HR V GS+ERFIGI+IE++
Sbjct: 424 DTLEREWQCGTIQVDYQLPSCERLNAEYVGEDNQRHMPVILHRTVIGSLERFIGILIEHY 483

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P+QA+V  +  + +EYAQ +A  L +  L ++ D   E +N KIR    +K
Sbjct: 484 GGAFPPWLAPVQAVVIPVAPAFLEYAQHVARELCARSLRVQADVSAERMNAKIRTAQTQK 543

Query: 603 IPIIIICGDKEASERSIGIR 622
           +P ++I G++E   + + +R
Sbjct: 544 VPYLLIVGERELRAQQVAVR 563


>gi|328553230|gb|AEB23722.1| threonyl-tRNA synthetase [Bacillus amyloliquefaciens TA208]
          Length = 638

 Score =  558 bits (1438), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 279/645 (43%), Positives = 420/645 (65%), Gaps = 21/645 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           I +TFPDG  K +    T  ++A+SIS SL K + A  +NG + DL   + E   IE+ +
Sbjct: 6   IVITFPDGKQKEYEKGITLEEIAQSISPSLKKTSAAGKVNGSLYDLGRSIHEDAEIELCS 65

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +    L V+RH+ AH++A+AV+ ++P+V + IGP+IE+GFYYDFD     +  +L  IE
Sbjct: 66  FQSEEGLEVMRHTAAHVLAQAVKRLYPKVCLGIGPVIENGFYYDFDMNDTITEKDLPAIE 125

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M  II+ +    ++ +S E+A +LF    +  K+E+L  IP  E V++YRQ E+ DLC
Sbjct: 126 KEMNRIISENPKITREEISREEAEQLF--AHDPLKLELLADIPQTETVSIYRQSEFVDLC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ S GQ+K F  L  V+GAYWRGDSN+ M+ RIYG A+ +++EL ++   L+E+EK
Sbjct: 184 RGPHLASAGQIKAF-SLTHVSGAYWRGDSNQKMMQRIYGKAFASKKELNRHFQLLKEAEK 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           R+HRKL  E+ LF  +E+  G+ F+   G  I  TL S++R K     Y+E+ TP +++Q
Sbjct: 243 RNHRKLGAELQLFMFSEEAPGMPFYLPNGQFIRNTLESFLRSKQDAYHYQEVRTPMMMNQ 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+QSGHWD Y+ NM+  +       D + FALKPMNCPGH+ +F   L+SYRELP+R+
Sbjct: 303 RLWEQSGHWDHYKENMYFSEA------DQQRFALKPMNCPGHMLIFKERLRSYRELPIRM 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFG V+R+E SG+L+GL+RVR F QDDAH+F T +Q+ +E      LI  +Y  FGF  
Sbjct: 357 AEFGQVHRHEFSGALNGLLRVRSFCQDDAHIFVTPDQIESEIASALQLIHEVYTAFGF-S 415

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD-RINTGVLLGEGAFYGPKFEY 481
             ++LSTRPE  +GS+ LWD AE+ ++ VL   K    D R N     G+GAFYGPK + 
Sbjct: 416 YDIELSTRPEDYMGSERLWDRAESALERVL---KEQGYDFRFNR----GDGAFYGPKIDI 468

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+ R  QC T+Q+DF +P +F+  Y++  ++K  PV+IHRAVFGS++RF+GI+ E+
Sbjct: 469 HIKDALNRSHQCATVQLDFQMPEKFDLTYIDEKNQKVRPVVIHRAVFGSLDRFLGIITEH 528

Query: 542 FKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           + G  PLWL+P+QA +  ++++   + A+++   +K   +  E D R+E + YKIRE  I
Sbjct: 529 YGGAFPLWLAPVQAKIIPVSNTVHRDCAEQVHRQMKKAGIRAELDQRDEKLGYKIREAQI 588

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           KKIP I + GD+E    ++ +R++G   T + ++ D +  +  E+
Sbjct: 589 KKIPYIAVVGDQECRHHTVHVRQYGQEDTFEENVSDFVSRIINET 633


>gi|266620391|ref|ZP_06113326.1| threonine--tRNA ligase [Clostridium hathewayi DSM 13479]
 gi|288868018|gb|EFD00317.1| threonine--tRNA ligase [Clostridium hathewayi DSM 13479]
          Length = 633

 Score =  558 bits (1438), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 285/642 (44%), Positives = 410/642 (63%), Gaps = 16/642 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K+T  +  +K F    +  ++A S+S  LAKKA A  I+G   DL   V  + ++ I+T
Sbjct: 1   MKVTLKNEEVKEFDSPLSVYEIAASLSAGLAKKACAAEIDGTPADLRTVVASDCALTILT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D    A   H+ +HI+A+AV+ ++PE ++AIGP I DGFYYDFD+ +PFS ++L  +E
Sbjct: 61  FDDEGGRAAFHHTTSHILAQAVKRLFPETKLAIGPSITDGFYYDFDRPEPFSPEDLEALE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M++I+  D       L  ++A  L + K E YKVE++E +P +E ++ YRQGE+ DLC
Sbjct: 121 TEMKKIVKEDLKLEYFTLPRKEAIALMQEKDEPYKVELIEDLPEEEIISFYRQGEYTDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+ +TG VK F KL  +AGAYWRGD +  ML+RIYGT++    +L  YL  +EE++K
Sbjct: 181 AGPHLMTTGPVKAF-KLTSIAGAYWRGDEHNKMLTRIYGTSFPKASDLEAYLTRIEEAKK 239

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           RDHRKL +E+ LF I ++G G  F+  KG  +   L ++ R    ++ Y EI TP +L++
Sbjct: 240 RDHRKLGKELGLFTIMDEGPGFPFFLPKGMVLKNALTNFWREIHEREGYVEIATPIMLNR 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHWD Y+ NM+     DDT      FA+KPMNCPG + V+    +SYR+LP+R+
Sbjct: 300 SLWETSGHWDHYKENMYTTTI-DDT-----EFAIKPMNCPGSMLVYKSQPRSYRDLPLRM 353

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            E G V+R+E SG+LHGLMRVR FTQDDAH++ T EQ+ +E   +  LI  +Y  FGF K
Sbjct: 354 GELGLVHRHEKSGALHGLMRVRCFTQDDAHIYMTPEQITDEIKGVVRLIDEVYNMFGF-K 412

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +GSD  W+ A N ++  LD +     D I   +  G+GAFYGPK ++ 
Sbjct: 413 YHVELSTRPEDSMGSDEDWEMATNSLREALDEM---GYDYI---INEGDGAFYGPKIDFH 466

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+D++GR WQCGTIQ+DF LP RF A Y  +  EK  P+MIHR + GSIERFIGI+IE++
Sbjct: 467 LEDSLGRTWQCGTIQLDFQLPLRFEAEYTGADGEKHRPIMIHRVLLGSIERFIGILIEHY 526

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P+Q  V  I+     YA+++ N LK +H+  E D R E I YKIRE  ++K
Sbjct: 527 AGKFPAWLAPVQVKVLPISDKNAAYAKDVYNTLKKNHIRCEIDERPEKIGYKIREAQLEK 586

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P +++ G KE    ++ +R   S     +S+ D   +L KE
Sbjct: 587 VPYMLVAGAKEEENHTVAVRYRDSGENVTMSVEDFAEMLKKE 628


>gi|83590594|ref|YP_430603.1| threonyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
 gi|83573508|gb|ABC20060.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Moorella
           thermoacetica ATCC 39073]
          Length = 633

 Score =  558 bits (1437), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 279/642 (43%), Positives = 408/642 (63%), Gaps = 16/642 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +++T PDG++K +    T   VA  IS  LA++A+A  +NG+V DL+ P+  E  +E++T
Sbjct: 1   MRITLPDGTVKEYAPGTTALQVARDISPRLAREALAARVNGEVWDLTRPLPEECQLELLT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
             D       RH+ AH++A+AV+ ++P  ++ IGP I DGFYYDFD E  F+ ++L  +E
Sbjct: 61  FADEGGRLAYRHTAAHVLAQAVKHLFPGTELGIGPAITDGFYYDFDSEHKFTPEDLTALE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +MQ II  D P  ++ +S E+A ELF    E YKVE++  +P    ++ YRQG++ DLC
Sbjct: 121 AEMQRIIKADLPLERREVSREEALELFRRLGEPYKVELINDLPEGVPISTYRQGDFIDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+ STG +K   KL  +AGAYWRG    PML RIYGTA+   ++L +YL+ LEE+ K
Sbjct: 181 AGPHLPSTGYLKAV-KLTSLAGAYWRGSERNPMLQRIYGTAFPKAKDLEEYLHRLEEARK 239

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQ 302
           RDHR+L  ++ +F + E+G G  F+H KG  I   L  + R +  +  Y EI TP +L +
Sbjct: 240 RDHRRLGAQLGIFSLHEEGPGFPFFHHKGMIIRNELEQFWREEHRRAGYLEIRTPVILSR 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+QSGHWD YR NM+  K       D   +A+KPMNCPG + V+     SYR+LP+RL
Sbjct: 300 TLWEQSGHWDHYRENMYFTKI------DGADYAIKPMNCPGAILVYKTEQHSYRDLPLRL 353

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AE G V+R+E SG LHGLMRVR FTQDD+H+F    Q+ +E   + +L+   Y  FGF K
Sbjct: 354 AELGLVHRHEKSGVLHGLMRVRAFTQDDSHIFMLPSQIASEIQGVIDLVDRFYNLFGF-K 412

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRP+  +GS+ +W+ A + ++  L+         +   V  G+GAFYGPK ++ 
Sbjct: 413 YHVELSTRPDNAMGSEEIWETATSALRQALEA------KGMPYAVNEGDGAFYGPKIDFH 466

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+D++GR WQCGTIQ+DF +P +F+  Y+    +K  PVMIHR VFGSIERFIGI+IE++
Sbjct: 467 LEDSLGRTWQCGTIQLDFLMPEKFDLTYIGEDGQKHRPVMIHRVVFGSIERFIGILIEHY 526

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G+ P+WL+P+Q  V  IT    +YA ++   L    +  E + RN+ I YKIR   ++ 
Sbjct: 527 GGSFPVWLAPVQVRVLPITDRHNDYAFKVRAELIRAGIRAEVNDRNDKIGYKIRAAQMEH 586

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IP +++ GDKEA+E ++ +R   +  T +V L + I  +T+E
Sbjct: 587 IPYMLVVGDKEAAEGTVAVRERQAGDTGRVPLAEFIARVTRE 628


>gi|158523204|ref|YP_001531074.1| threonyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
 gi|238686905|sp|A9A078|SYT_DESOH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|158512030|gb|ABW68997.1| threonyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
          Length = 637

 Score =  557 bits (1436), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 277/631 (43%), Positives = 405/631 (64%), Gaps = 20/631 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I +T PD S K F    TG  +A+SIS  L ++ VAV ++G   DLS+P+  + ++ +IT
Sbjct: 2   ITITLPDSSTKTFDGPVTGEQIAKSISEGLWRECVAVEVDGAAMDLSEPIATDAAVRLIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
             DP  L ++RHS AH+MAEAVQ ++P+ ++ IGP++EDGFYYD D E P S +  +++E
Sbjct: 62  TRDPEGLHIMRHSAAHVMAEAVQRVFPDAELTIGPVVEDGFYYDIDME-PVSEEIFSRVE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            ++++I++   PF+++ +  +KA  L   + + YK EIL  I   + V+LY  G++ DLC
Sbjct: 121 AEIKKIVSAKIPFVRKEV--DKAEALDRYRDQPYKTEILNEI-EDDTVSLYTNGDFTDLC 177

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV  TG V+   KL K++GAYWRGD NR  L R+YGTA+ +++EL  YL  +EE++K
Sbjct: 178 RGPHVPHTGFVRAV-KLTKISGAYWRGDQNREQLQRLYGTAFFSKKELDAYLTLIEEAKK 236

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL  E+DLF   E+ +G+ F+H  G K++  L+ Y R + +   Y E+ TP +LD+
Sbjct: 237 RDHRKLGAELDLFSFHEEAAGMPFFHPNGMKLWNALLDYWRLEHRAAGYVEVKTPVMLDR 296

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHW++YR NM+ V   DD       +A+KPMNCPG + ++     SYR+LP+R+
Sbjct: 297 ALWEKSGHWENYRENMY-VSVIDDN-----QYAIKPMNCPGGMLLYKEKRYSYRDLPLRV 350

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AE G V+R+E SG L GL RVR F QDDAH+F T +Q+  E   +  L+ +IY  FG   
Sbjct: 351 AEIGLVHRHELSGVLSGLFRVRAFHQDDAHIFMTPDQIEQEIFGVLKLVETIYSTFGL-G 409

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             ++LSTRP K +G+D  W  A   ++  LD             V  G+GAFYGPK +  
Sbjct: 410 FHLELSTRPAKSIGTDEQWVKATAGLRAALDAYGK------GYAVNEGDGAFYGPKIDVH 463

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+GR WQCGTIQ+D +LP RF+  Y+++ SEK  PVMIHR ++GSIERF+GI+IE+F
Sbjct: 464 IKDALGRTWQCGTIQLDMSLPERFDLSYIDAGSEKQRPVMIHRVIYGSIERFLGILIEHF 523

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  PLWL+P QA++  +    + YA+E+    +   +  E D R+E++N K+R+  I K
Sbjct: 524 AGKFPLWLAPTQAVLLPLNDDMIPYAREVRQEFEQAGIRTEIDDRSESLNKKVRQAQIDK 583

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
           IP+II  G KE   R++ +R         VS
Sbjct: 584 IPLIITLGGKEKEARTLSVRTLDGQVRHGVS 614


>gi|310827810|ref|YP_003960167.1| threonyl-tRNA synthetase [Eubacterium limosum KIST612]
 gi|308739544|gb|ADO37204.1| threonyl-tRNA synthetase [Eubacterium limosum KIST612]
          Length = 637

 Score =  557 bits (1435), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 274/621 (44%), Positives = 409/621 (65%), Gaps = 18/621 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           + +T  DGS+K +    T  DVA+ IS  LA+  +A  +NG++ D+  P+ E S + ++T
Sbjct: 1   MNITLKDGSVKQYEPGITVYDVAKDISEGLARNTMAGELNGELVDIRKPITEDSTLNLLT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +         HS +H+MA+A++ +WPE Q+ IGP I++GFYYD D E   + ++L +IE
Sbjct: 61  FDSEGGKHAFWHSASHLMAQAIKRLWPEAQLTIGPAIDNGFYYDIDLEHTLTPEDLEKIE 120

Query: 124 KKMQEIIARDSPFLKQYL-SHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           K+M++I+ +++P ++ Y  S E A +  E++ E YK E++ ++P    ++ Y QGEW DL
Sbjct: 121 KEMKKIV-KEAPEIEYYTKSREDALKWAEAEGETYKTELINNLPEDAVISFYGQGEWADL 179

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPH+R+  Q+K F KL+ +AGAYW GD+N  ML R+YG A+  + EL +YL  LEE++
Sbjct: 180 CAGPHIRNASQIKAF-KLLSLAGAYWHGDANNKMLQRVYGIAFPKKSELDEYLQRLEEAK 238

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLD 301
           KRDHRKL +E+DLF + E+G G  F+H KG  +   L ++ R + +K  Y+EI TP +L+
Sbjct: 239 KRDHRKLGKELDLFSMHEEGPGFPFFHPKGMVLRNELENFWRSEHMKKGYKEIKTPIMLN 298

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             LW++SGHWD+Y+ NM+  +       D + FA+KPMNCPG + V+     SYRELP+R
Sbjct: 299 ADLWRRSGHWDNYKENMYFTEI------DGQEFAVKPMNCPGGMLVYKTRQHSYRELPLR 352

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           + E G V+R+E  G+LHGLMRVR FTQDDAH+F T +Q+ +E + I +L   IY  FGF 
Sbjct: 353 MGELGQVHRHELHGALHGLMRVRTFTQDDAHIFLTMDQVKDEVIGIIDLANEIYDIFGF- 411

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
           K  V+LST+PEK +G D  W+ A + ++  L+      Q  +N G    +GAFYGPK ++
Sbjct: 412 KYKVELSTKPEKAIGKDEDWEVATDALREALEAKGMDYQ--LNPG----DGAFYGPKIDF 465

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L+D+IGR WQCGTIQ+D  +P RF+  YV S  EK  PV++HR +FGSIERF+GI+IE+
Sbjct: 466 HLEDSIGRTWQCGTIQLDMQMPERFDLTYVGSDGEKHRPVILHRTIFGSIERFLGILIEH 525

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           F G  PLWL+P+Q  +  ++ +   + +EIA  L+   + +E DFR+E I Y+IRE  ++
Sbjct: 526 FAGKFPLWLAPVQVQLIPVSDAHDAFTKEIAAKLEEAGIRVEIDFRDEKIGYRIREAQMQ 585

Query: 602 KIPIIIICGDKEASERSIGIR 622
           KIP +++ GDKE     + IR
Sbjct: 586 KIPYMLVIGDKEVESGRLSIR 606


>gi|167766936|ref|ZP_02438989.1| hypothetical protein CLOSS21_01453 [Clostridium sp. SS2/1]
 gi|167710911|gb|EDS21490.1| hypothetical protein CLOSS21_01453 [Clostridium sp. SS2/1]
          Length = 645

 Score =  557 bits (1435), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 281/643 (43%), Positives = 413/643 (64%), Gaps = 19/643 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M   +K+T  DGS+K +  + +  D+A+ IS  LA+ A A  ++G+V DL   + ++  +
Sbjct: 1   MNKKMKITLKDGSVKEYENNMSVIDIAKDISEGLARVACAGEVDGEVVDLRTVIDKDCEL 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            I+T +        RH+ +HI+A+AV+ ++PE ++AIGP I++GFYYD +K+ PF+ ++L
Sbjct: 61  NILTFDSDEGKHAFRHTASHILAQAVKRLYPETKLAIGPSIDNGFYYDMEKDTPFTQEDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IEK+M++I+  +          ++A    + + E YKVE++E +P    ++ Y+QGE+
Sbjct: 121 EKIEKEMKKIVKENLEITSFTKPRDEAIAFMKERNEPYKVELIEDLPEDSVISFYQQGEF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLC GPH+ +T  VK F KL  +AGAYWRGD +  ML+RIYGTA+  + EL  YL  +E
Sbjct: 181 VDLCAGPHLMTTKPVKAF-KLTSIAGAYWRGDEHNQMLTRIYGTAFTKKAELDAYLTMME 239

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+ KRDHRKL +E+ LF + E+G G  F+  KG  +  TL+ Y R    K  Y EI+TP 
Sbjct: 240 EARKRDHRKLGKELGLFMMREEGPGFPFFLPKGMVLKNTLLDYWREIHQKAGYVEISTPI 299

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +HLW+ SGHWD Y+ NM+       T+ D + FA+KPMNCPG V V++   +SYR+L
Sbjct: 300 MLSRHLWETSGHWDHYKENMYT------TVIDDQDFAIKPMNCPGGVLVYDSEPRSYRDL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+ E G V+R+E SG LHGLMRVR FTQDDAH+F T +Q+ +E   +  LI  +Y  F
Sbjct: 354 PLRMGELGLVHRHEKSGQLHGLMRVRCFTQDDAHIFMTPDQIKDEIKGVAGLIDQVYNLF 413

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF K  V+LSTRP+  +GSD  W+ A + ++  LD +       ++  V  G+GAFYGPK
Sbjct: 414 GF-KYHVELSTRPDDSMGSDEDWELATDSLRAALDDLG------LDYVVNEGDGAFYGPK 466

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++ L+D+IGR WQCGTIQ+DF LP RF+  Y  +  EK  P+MIHR  FGSIERFIGI+
Sbjct: 467 IDFHLEDSIGRTWQCGTIQLDFQLPLRFDLHYTGADGEKHRPIMIHRVAFGSIERFIGIL 526

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+F G  P WL+P+Q  V  I+   ++YA ++ + LK+  +  + D R E + YKIRE 
Sbjct: 527 IEHFAGAFPTWLAPVQVEVIPISDKHLDYANKVLDTLKAAGIRADIDTRAEKMGYKIREA 586

Query: 599 SIKKIPIIIICGDKEASERSIGIR-RF-GSTTTQKV-SLLDAI 638
            ++KIP +++ G KE    ++ +R RF G     K+   LDAI
Sbjct: 587 QLQKIPYMLVVGGKEEENEAVSVRSRFKGDEGQMKLDDFLDAI 629


>gi|182419627|ref|ZP_02950872.1| threonyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237665561|ref|ZP_04525549.1| threonine--tRNA ligase [Clostridium butyricum E4 str. BoNT E
           BL5262]
 gi|182376517|gb|EDT74094.1| threonyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237658508|gb|EEP56060.1| threonine--tRNA ligase [Clostridium butyricum E4 str. BoNT E
           BL5262]
          Length = 636

 Score =  556 bits (1433), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 284/642 (44%), Positives = 411/642 (64%), Gaps = 16/642 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           I +   DGSIK    ++T  D+A+SISR+L K A+   +NG + DL+  ++    + I++
Sbjct: 3   INIKLKDGSIKEIEDNSTVFDLAQSISRNLGKSALVGEVNGCLVDLNYKLKNNDEVNILS 62

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +  +++ VIRHS AHIMA+AV+ ++   ++AIGP I +GFYYDFD + P   ++L +IE
Sbjct: 63  DDSEKAVEVIRHSSAHIMAQAVKRLYKNAKLAIGPSIANGFYYDFDMDTPIIKEDLEKIE 122

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M +I+  +  F +  +S E+A ++ +   E YKVE++  +P  E ++LY+QG++ DLC
Sbjct: 123 KEMNKIVKENLKFERIDVSKEEALKIMKDNDEIYKVELINDLPEGEKISLYKQGDYIDLC 182

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ ST +  K FKL+ VAGAYWRG+    ML R+YG A++  +EL  +L  LEE++K
Sbjct: 183 RGPHIPST-KYAKAFKLISVAGAYWRGNEKNKMLQRVYGVAFSNLKELEIHLNNLEEAKK 241

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           RDHRKL +E+ LF  AE+G G  F+  KG  +  +LI + R+   +  Y E+ TP +L++
Sbjct: 242 RDHRKLGKELKLFTFAEEGPGFPFFLPKGVILKNSLIDFWRKIHYEAGYVEVETPIMLNK 301

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW  Y+ NM+     D+       FALKPMNCPG + V+     SYR+ P+R+
Sbjct: 302 KLWETSGHWYHYKENMYTSMIDDEE------FALKPMNCPGGMIVYKSDSHSYRDFPMRV 355

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            E G V+R+E SG+LHGLMRVR FTQDDAH+F   EQ+ +E   +  LI  +Y  FGF K
Sbjct: 356 GELGRVHRHELSGALHGLMRVRAFTQDDAHIFMLPEQIKSEIKGVVELIDKVYSIFGF-K 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +GSD  W  AE+ ++G LD +  + Q  IN G    +GAFYGPK ++ 
Sbjct: 415 YHVELSTRPEDSMGSDEEWKMAEDSLRGALDEL--NLQYVINEG----DGAFYGPKIDFH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+D+IGR WQCGTIQ+DF LP RF   YV S +EK  P++IHR +FGSIERFIGI+IE+F
Sbjct: 469 LEDSIGRTWQCGTIQLDFQLPQRFELEYVGSDNEKHRPIVIHRVIFGSIERFIGILIEHF 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P+Q  V  I+     Y  E+      + + +E D RNE I YKIRE   ++
Sbjct: 529 AGKFPTWLAPVQVKVLPISDKFNNYCDEVVKQFNENGIRVEIDQRNEKIGYKIREARNER 588

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P I+I G+KE  E +I +R   +     +++ D I  +  E
Sbjct: 589 VPYIVIIGEKEEGEGNISLRSRKNGDEGSINVKDLIERINNE 630


>gi|320353536|ref|YP_004194875.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Desulfobulbus
           propionicus DSM 2032]
 gi|320122038|gb|ADW17584.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Desulfobulbus
           propionicus DSM 2032]
          Length = 641

 Score =  555 bits (1431), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 283/626 (45%), Positives = 401/626 (64%), Gaps = 18/626 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAES-ISRSLAKKAVAVAINGKVCDLSDPV-REGSIE 60
           ++I ++  DG  K+FP+    +DV +  +S    K+ VAV  +G++ DLS P+  +  IE
Sbjct: 2   AEISVSLQDGENKSFPLGTAVADVLKDLVSGKQRKQTVAVKCDGRLLDLSTPLAMDAVIE 61

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            ++      L ++RHS AHIMA AV+ ++  +V+VAIGP IEDGFYYDFD+E+PFSS+E 
Sbjct: 62  PVSVHSEAGLEILRHSTAHIMALAVKELFGDQVKVAIGPAIEDGFYYDFDREKPFSSEEF 121

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            QIE KM E+     PF++Q +  E+A   FE   E YK+E+L  + A E V+LY  G +
Sbjct: 122 EQIEAKMAELANARLPFVRQEMPKEEAIRFFEQHGEIYKLELLREMEA-ETVSLYTHGGF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV  +  +K  FKL++VAG+YWRGD  R ML+RIYGTA+  ++EL QYL  LE
Sbjct: 181 VDLCRGPHVPDSSWIK-VFKLLRVAGSYWRGDEKRQMLTRIYGTAFADKKELQQYLARLE 239

Query: 240 ESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTP 297
           E+ KRDHRKL +++ LF I +  G G+I W  +G  + + +  Y + +  ++ Y+ + TP
Sbjct: 240 EARKRDHRKLGKQLGLFTIQDQIGPGLILWQPRGALLRRLIEDYWKDEHYRNGYQLLYTP 299

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +  Q LW+ SGH D Y  NM++    D+ +     + LKPMNCP H+ V+N    SYRE
Sbjct: 300 HIARQDLWKTSGHLDFYGENMYSAMEIDEVM-----YQLKPMNCPFHIGVYNADKHSYRE 354

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
            P+R  E G+VYR E +G+LHGLMRVRGFTQDDAH+FC  +Q+  E   I +L + I K 
Sbjct: 355 FPIRWCELGTVYRYERTGALHGLMRVRGFTQDDAHIFCRPDQLEEEIFNIIDLNLHILKT 414

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF++  V LSTRPEK VGSD  W  +   +K  L+    + Q      +  GEG FYGP
Sbjct: 415 FGFDQYDVYLSTRPEKYVGSDEHWQLSTQALKQALEKKGLAYQ------LDPGEGVFYGP 468

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  +KD +GR WQC TIQVDFNLP RF   Y      +  P+MIHRA+ GS+ERFIG+
Sbjct: 469 KIDIKIKDQLGRSWQCSTIQVDFNLPERFQMNYTGVDGAEHQPIMIHRALMGSLERFIGV 528

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE++ G  PLWL+P QA +  IT    EY +++   L++  + I+ D RNE +NYKIRE
Sbjct: 529 LIEHYAGAFPLWLAPEQARIMNITDDQGEYCEQVHARLRAMGVRIDKDVRNEKLNYKIRE 588

Query: 598 HSIKKIPIIIICGDKEASERSIGIRR 623
             + K+P ++I G++E  E ++ +R+
Sbjct: 589 AQLMKVPYMLIVGEREKQEGTVTVRK 614


>gi|304439592|ref|ZP_07399496.1| threonine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
 gi|304371904|gb|EFM25506.1| threonine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
          Length = 647

 Score =  555 bits (1431), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 272/642 (42%), Positives = 415/642 (64%), Gaps = 17/642 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           +K++FPDGS K F       DVA+SIS  LA+ A+   +N +V  ++DP+  +  ++I+T
Sbjct: 13  MKISFPDGSSKEFEKGIKVYDVAKSISEGLARNALGAMVNDEVLGVNDPINCDAEVKILT 72

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            ED     +  H+ AH++A A+ ++WPE + AIGP I++GFYYD D E     ++L +IE
Sbjct: 73  FEDKEGKKIFWHTSAHVLAHAIMNLWPETKFAIGPAIDNGFYYDIDLEHKIGPEDLPKIE 132

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           ++MQ+I+        + +  +KA E F+ + + YKVE++E I   ENV +Y+ G + DLC
Sbjct: 133 EEMQKIVKDAHEVTFEIMPRDKAIEFFKERGQDYKVELIEGI-EDENVGIYKMGNFVDLC 191

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ +  ++ K FKL+ +AGAYWRGDSN  ML RIYG ++  +++L +Y+  +EE+EK
Sbjct: 192 RGPHIGNV-KIIKAFKLLSIAGAYWRGDSNNKMLQRIYGISFEKKKQLDEYIERMEEAEK 250

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQ 302
           RDHR++ RE+DLF + ++G G  F+   G  +  TL+++ R  + ++ Y EI TP +L++
Sbjct: 251 RDHRRIGRELDLFTMRDEGPGFPFFLPHGMILKNTLLNWWRNVLLENGYGEIQTPIILNE 310

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW +SGHWD Y+ NM+  K       D   +A+KPMNCPG + V+     SYR+LP+RL
Sbjct: 311 ALWHRSGHWDHYKDNMYFTKI------DGEDYAVKPMNCPGSILVYEEKAHSYRDLPIRL 364

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           +EFG V+R+E SG+LHGL RVR FTQDDAHV+C  EQ+ +E  K+ +L   +Y  FGF K
Sbjct: 365 SEFGQVHRHELSGALHGLFRVRTFTQDDAHVYCLPEQVKDEVFKMIDLAELLYSTFGF-K 423

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             ++LSTRP+  +G+   W+ AE  +K  L+  +   +  IN G    +GAFYGPK ++ 
Sbjct: 424 YEIELSTRPDDFMGTIEAWNIAEKNLKDALE--ERGLKYTINEG----DGAFYGPKIDFH 477

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+DAIGR WQCGTIQ+DF +P  F   Y+N+  EK  PVM+HRA+ GSIERF+GI+IE+F
Sbjct: 478 LEDAIGRTWQCGTIQLDFRMPENFELTYINADGEKARPVMLHRALLGSIERFMGILIEHF 537

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  PLWL+P+Q  +  ++    +YA+E+ N LK+    +E D R E + YKIR+  ++K
Sbjct: 538 AGKFPLWLAPVQVEIIPVSEKFHDYAEEVKNKLKTSGFRVEMDTRAEKVGYKIRQAQLRK 597

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  +++ G++E     + IR+      + V + D I  + +E
Sbjct: 598 VNYMLVIGEQEVESGLLSIRKRSGEEVKDVKIEDFISQMKEE 639


>gi|302035784|ref|YP_003796106.1| threonyl-tRNA synthetase [Candidatus Nitrospira defluvii]
 gi|300603848|emb|CBK40180.1| Threonyl-tRNA synthetase [Candidatus Nitrospira defluvii]
          Length = 651

 Score =  555 bits (1430), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 274/621 (44%), Positives = 387/621 (62%), Gaps = 15/621 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I++T PDG+ K  P   T  +        L  K +A  ING+  DLS P+ ++ +IE +T
Sbjct: 6   IQITLPDGTRKQVPAGCTVREALTPEGGRLDAKVLAAKINGEPMDLSRPLEQDATIEALT 65

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            E P    V RHS  HIMA+AV+ ++P  Q+ IGP ++DGFYYDF  ++PF+ ++L +IE
Sbjct: 66  FESPEGREVYRHSSTHIMAQAVKEVFPTAQLTIGPALDDGFYYDFAFDRPFTPEDLEKIE 125

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +  EI+ R     +  LS + A + F+ + E YKVE++ S      ++LYRQGE+ DLC
Sbjct: 126 ARAIEIMKRGLTVTRSELSKQDAIKFFQERGEGYKVELINSFDDASPISLYRQGEFVDLC 185

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ +TG V  F KL+   GAYWRGD   PML R+YGT++ T++EL  +L  LEE ++
Sbjct: 186 RGPHLPTTGYVGAF-KLLSTGGAYWRGDERNPMLQRVYGTSFPTKKELDAHLAKLEEIKR 244

Query: 244 RDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLD 301
           RDHRKL +E+DL  I ++ G G++ WH KG  I   + ++ R + IKD Y+ + +P V  
Sbjct: 245 RDHRKLGKELDLITIQDEIGPGLVLWHPKGSLIRLLIENFWREQHIKDGYDLVYSPHVAR 304

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             LW+ SGH D YR NMFA    + +      + LKPMNCP H+ ++   ++SYR+LP+R
Sbjct: 305 LDLWKTSGHVDYYRENMFASMKLEGS-----EYQLKPMNCPFHIMIYKSHMRSYRDLPIR 359

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
             E G+VYR E +G LHGL+RVRGFTQDDAH+FC  +Q+  E  ++ +    +   FGF 
Sbjct: 360 YGELGTVYRYERTGVLHGLLRVRGFTQDDAHLFCRPDQIEAEVSRVLDFTFFVLGTFGFT 419

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
           +  V LSTRP+K VGS+  W  A N ++  L +   + +      V  GEG FYGPK + 
Sbjct: 420 EFEVYLSTRPDKSVGSEENWTIATNALEAALKSRGVAYE------VDPGEGVFYGPKIDI 473

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KD +GR WQC T+QVDFN P RF   Y     +   P+MIHRA+ GSIERF GI+IE+
Sbjct: 474 KIKDVLGRSWQCSTVQVDFNNPERFKLAYTGEDGKAHQPIMIHRALMGSIERFFGILIEH 533

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  P WL+P+QA+V TIT +  E+A +I + LKSH   +E D RNE I +KIRE    
Sbjct: 534 YAGAFPTWLAPVQAVVLTITDNQQEFAAKIVSTLKSHGFRVEADLRNEKIGFKIREAEKN 593

Query: 602 KIPIIIICGDKEASERSIGIR 622
           KIP +++ GDKE     + +R
Sbjct: 594 KIPYMLVVGDKEVQSGMVAVR 614


>gi|325661884|ref|ZP_08150505.1| threonyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA]
 gi|325471862|gb|EGC75079.1| threonyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA]
          Length = 643

 Score =  555 bits (1429), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 285/643 (44%), Positives = 410/643 (63%), Gaps = 18/643 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K+T  DGS+K +    +  ++A  IS  LA+ A A  ++G+V DL   + ++  + I T
Sbjct: 1   MKITLKDGSVKEYSEAKSVYEIAADISEGLARMATAGEVDGEVIDLRTKIDQDCELTIHT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            + P      RH+ +HI+A+AV+ ++P+ ++AIGP I+DGFYYDFD+E PF++++L  IE
Sbjct: 61  FQSPEGAHAFRHTTSHILAQAVKRLFPDTKLAIGPAIDDGFYYDFDREVPFTTEDLETIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M++I+  D    +  L  E+A  L + K+E YKVE++E +P    ++ Y+QGE+ DLC
Sbjct: 121 KEMKKIVKEDLKIEQFTLPREEAIALMKEKEEPYKVELIEDLPEDAVISFYKQGEFTDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+ ST  VK F KL  +AGAYWRG     ML+RIYGT++  + +L +YL  +EE++K
Sbjct: 181 AGPHLLSTKSVKAF-KLTSLAGAYWRGSEKNKMLTRIYGTSFTKKADLDEYLAKIEEAKK 239

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           RDHRKL +E+ LF I E+G G   +  KG  +  TLI Y R    +  Y EI+TP +L++
Sbjct: 240 RDHRKLGKELGLFTILEEGPGFPIFLPKGMILKNTLIDYWREVHTRAGYVEISTPIMLNR 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW  Y+ NM+       T+ D   FA+KPMNCPG + V+     SYR+LP+R+
Sbjct: 300 QLWETSGHWAHYKENMYT------TVIDEEDFAIKPMNCPGGILVYKTEPHSYRDLPLRM 353

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            E G+V+R+E SG+LHGLMRVR FTQDDAH+F T+EQ+ +E   +  LI  +Y  FGF K
Sbjct: 354 GELGTVHRHEKSGALHGLMRVRSFTQDDAHIFMTREQIKDEIKGVARLIDEVYSLFGF-K 412

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LST+PE  +GS   WD A + ++  LD ++      +   +  G+GAFYGPK ++ 
Sbjct: 413 YHVELSTKPEDSMGSQEDWDIATDALRSALDELQ------LPYVINEGDGAFYGPKIDFH 466

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+D +GR WQCGTIQ+DF LP RF   Y+ +  EK  P+M+HR VFGSIERFIGI+IE+F
Sbjct: 467 LEDTLGRTWQCGTIQLDFQLPLRFEMEYIAADGEKHRPIMVHRVVFGSIERFIGILIEHF 526

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P Q  V  I+    EYA E+A  LK   +    D R+E I YKIR+  + K
Sbjct: 527 AGAFPTWLAPEQVKVLPISEKYHEYANEVAAKLKEAKIRCSVDERSEKIGYKIRDARLNK 586

Query: 603 IPIIIICGDKEASERSIGIR-RFGSTTTQKVSLLDAIPILTKE 644
           IP +++ G KE  E  + +R RF     Q+ SL   I  +T+E
Sbjct: 587 IPYMLVVGAKEQEEGVVSVRSRFLGDEGQR-SLDTFIAEITEE 628


>gi|325263795|ref|ZP_08130528.1| threonine--tRNA ligase [Clostridium sp. D5]
 gi|324030833|gb|EGB92115.1| threonine--tRNA ligase [Clostridium sp. D5]
          Length = 641

 Score =  555 bits (1429), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 282/643 (43%), Positives = 404/643 (62%), Gaps = 18/643 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K+T  DG++K +    +  ++A  IS  LA+ A A  ING+  DL   V R+  + I+T
Sbjct: 1   MKITLKDGTVKEYAGSRSIIEIASDISEGLARMATAGEINGETADLRTIVDRDCDLNILT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D +      H+ +HIMA+AV+ ++P+ ++AIGP + DGFYYD D+E P + ++L +IE
Sbjct: 61  FQDEKGKGAFWHTASHIMAQAVKRLYPDTRLAIGPSVSDGFYYDIDRETPLTVEDLEKIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M++I+    P  +     ++A   FE K E YKVE++E +P    ++ Y Q E+ DLC
Sbjct: 121 AEMKKIVKEALPIEQYTKPRQEAIAYFEEKGEPYKVELIEDLPDDAVISFYSQAEFTDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+ +T  VK F KL  +AGAYWRG     ML RIYGTA+  + EL +YL  LEE++K
Sbjct: 181 AGPHLMTTKPVKAF-KLTSLAGAYWRGSEKNKMLQRIYGTAFPKKAELDEYLTMLEEAKK 239

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           RDHRKL +E+ LF + ++G G  F+  KG  +  TL+ Y R    ++ Y EI TP +L +
Sbjct: 240 RDHRKLGKELGLFMMRDEGPGFPFFLPKGMVLKNTLLDYWREIHSRNGYVEIATPIMLSR 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
           HLW+ SGHWD Y+ NM+       T+ D   FA+KPMNCPG + V+    +SYR+LP+R+
Sbjct: 300 HLWETSGHWDHYKDNMYT------TVIDEEDFAIKPMNCPGGILVYQSEPRSYRDLPLRM 353

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            E G V+R+E SG LHGLMRVR FTQDDAH+F   EQ+ +E   +  LI  +Y  FGF K
Sbjct: 354 GELGLVHRHEKSGQLHGLMRVRCFTQDDAHIFMMPEQIRDEIKDVARLIDEVYSLFGF-K 412

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +GSD  W+ A   ++G LD ++      +   V  G+GAFYGPK ++ 
Sbjct: 413 YHVELSTRPEDSMGSDEDWEMATEALRGALDDLE------LPYVVNEGDGAFYGPKIDFH 466

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+D+IGR WQCGTIQ+DF LP RF+  Y  +  EK  P+MIHR  FGSIERFIGI+IE+F
Sbjct: 467 LEDSIGRTWQCGTIQLDFQLPLRFDLEYTGADGEKHRPIMIHRVAFGSIERFIGILIEHF 526

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P+Q  V  I+   ++Y +++ + L    +  + D R E I YKIRE  ++K
Sbjct: 527 AGAFPTWLAPVQVKVLPISDKYIKYGKKVQDTLNKAGIRADIDMRAEKIGYKIREAQMQK 586

Query: 603 IPIIIICGDKEASERSIGIR-RFGSTTTQKVSLLDAIPILTKE 644
           IP +++ G KE  +R + +R RF     QK S+ + I  +T E
Sbjct: 587 IPYMLVVGAKEEEDRLVSVRSRFAGDEGQK-SMDEFIASITSE 628


>gi|317499591|ref|ZP_07957854.1| threonyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
 gi|316893140|gb|EFV15359.1| threonyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 641

 Score =  554 bits (1428), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 275/629 (43%), Positives = 406/629 (64%), Gaps = 17/629 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K+T  DGS+K +  + +  D+A+ IS  LA+ A A  ++G+V DL   + ++  + I+T
Sbjct: 1   MKITLKDGSVKEYENNMSVIDIAKDISEGLARVACAGEVDGEVVDLRTVIDKDCELNILT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +        RH+ +HI+A+AV+ ++PE ++AIGP I++GFYYD +K+ PF+ ++L +IE
Sbjct: 61  FDSDEGKHAFRHTASHILAQAVKRLYPETKLAIGPSIDNGFYYDMEKDTPFTQEDLEKIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M++I+  +          ++A    + + E YKVE++E +P    ++ Y+QGE+ DLC
Sbjct: 121 KEMKKIVKENLEITSFTKPRDEAIAFMKERNEPYKVELIEDLPEDSVISFYQQGEFVDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+ +T  VK F KL  +AGAYWRGD +  ML+RIYGTA+  + EL  YL  +EE+ K
Sbjct: 181 AGPHLMTTKPVKAF-KLTSIAGAYWRGDEHNQMLTRIYGTAFTKKAELDAYLTMMEEARK 239

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           RDHRKL +E+ LF + E+G G  F+  KG  +  TL+ Y R    K  Y EI+TP +L +
Sbjct: 240 RDHRKLGKELGLFMMREEGPGFPFFLPKGMVLKNTLLDYWREIHQKAGYVEISTPIMLSR 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
           HLW+ SGHWD Y+ NM+       T+ D + FA+KPMNCPG V V++   +SYR+LP+R+
Sbjct: 300 HLWETSGHWDHYKENMYT------TVIDDQDFAIKPMNCPGGVLVYDSEPRSYRDLPLRM 353

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            E G V+R+E SG LHGLMRVR FTQDDAH+F T +Q+ +E   +  LI  +Y  FGF K
Sbjct: 354 GELGLVHRHEKSGQLHGLMRVRCFTQDDAHIFMTPDQIKDEIKGVAGLIDQVYNLFGF-K 412

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRP+  +GSD  W+ A + ++  LD +       ++  V  G+GAFYGPK ++ 
Sbjct: 413 YHVELSTRPDDSMGSDEDWELATDSLRAALDDLG------LDYVVNEGDGAFYGPKIDFH 466

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+D+IGR WQCGTIQ+DF LP RF+  Y  +  EK  P+MIHR  FGSIERFIGI+IE+F
Sbjct: 467 LEDSIGRTWQCGTIQLDFQLPLRFDLHYTGADGEKHRPIMIHRVAFGSIERFIGILIEHF 526

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P+Q  V  I+   ++YA ++ + LK+  +  + D R E + YKIRE  ++K
Sbjct: 527 AGAFPTWLAPVQVEVIPISDKHLDYANKVLDTLKAAGIRADIDTRAEKMGYKIREAQLQK 586

Query: 603 IPIIIICGDKEASERSIGIR-RFGSTTTQ 630
           IP +++ G KE    ++ +R RF     Q
Sbjct: 587 IPYMLVVGGKEEENEAVSVRSRFKGDEGQ 615


>gi|108758923|ref|YP_631780.1| threonyl-tRNA synthetase [Myxococcus xanthus DK 1622]
 gi|122981032|sp|Q1D6E3|SYT_MYXXD RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|108462803|gb|ABF87988.1| threonyl-tRNA synthetase [Myxococcus xanthus DK 1622]
          Length = 642

 Score =  554 bits (1428), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 278/653 (42%), Positives = 408/653 (62%), Gaps = 16/653 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSD-VAESISRSLAKKAVAVAINGKVCDLSDPVREG-S 58
           M   I +T PDGS K      T +D V ESI   LAK A+   +NG+  DL+  + E   
Sbjct: 1   MSDIITVTLPDGSQKQTARGTTIADFVRESIGPGLAKAALFARVNGQDMDLARKLDEDVK 60

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           ++I TP+ P SL +IRH  AH++A AVQ ++P  QV IGP  E+GFYYDF +E+PF+ ++
Sbjct: 61  LQIFTPKSPESLELIRHDAAHVVASAVQKLFPGTQVTIGPATEEGFYYDFFREKPFTPED 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK--ENVTLYRQ 176
           L +IE +    + RD  F++  +S ++A  LFE K E +KVEI++ I AK  + +TLY  
Sbjct: 121 LEKIEAEANAELKRDMAFVRTEISMDEAVRLFEEKGEKFKVEIVKDIAAKGAKTLTLYTH 180

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           G+W D C GPH  STG++    K++  +GAYWRGD   PML R+YGTA+  +++L +YL 
Sbjct: 181 GDWVDFCLGPHAPSTGKIG-IIKILSSSGAYWRGDHRNPMLQRVYGTAFFDKKQLAEYLT 239

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEIN 295
            +EES+KRDHRKL +E+DLFH      G  FW  KG  ++ TL ++MR+  ++D Y EI 
Sbjct: 240 RIEESKKRDHRKLGKELDLFHFHPYSPGSAFWTPKGTTLYTTLSNWMRQLTQNDGYVEIK 299

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP + ++ LW+ SGHW  Y+ NMF V  ++    D   F+LKPMNCP H   +     SY
Sbjct: 300 TPLMFNKGLWETSGHWGKYKENMFLVLDSESGEHD---FSLKPMNCPSHHLFYGFKKHSY 356

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           R+LP+R      ++RNE +GSL GL RVR F QDDAH++CT+ Q+ +E  +   L+  +Y
Sbjct: 357 RDLPLRYHTQDVLHRNEAAGSLGGLTRVRQFAQDDAHIYCTEAQITDEVRRFVKLLDHVY 416

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           K  G     VKLSTRPE+R+G D+LWD AE  +K  L+++       +   +  G+GAFY
Sbjct: 417 KAVGL-TYAVKLSTRPEQRLGDDSLWDRAEGGLKAALESLG------LEYELAPGDGAFY 469

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++ + D+IGR WQ GT+Q+D+  P RF+  YV   + +  PV++HRA+FGS ERF 
Sbjct: 470 GPKIDFAVSDSIGRRWQLGTMQLDYLAPERFDLTYVGEDNAEHRPVVLHRAIFGSFERFT 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            I+IE+F G  P WL+PIQA++ T+     +YA+++ + L++    +E D R  ++N KI
Sbjct: 530 AILIEHFAGAFPAWLAPIQAVLVTVADRQNDYARKVRDSLRAKGYRVEFDERGLSMNAKI 589

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
           RE  ++K+P  ++ GD E S   +  RR+G    + + + D   +L KE+  P
Sbjct: 590 REAQLQKVPFTLVVGDNEVSGEGVSPRRYGGEDLKTMKVTDFEALLAKEAALP 642


>gi|164687668|ref|ZP_02211696.1| hypothetical protein CLOBAR_01310 [Clostridium bartlettii DSM
           16795]
 gi|164603442|gb|EDQ96907.1| hypothetical protein CLOBAR_01310 [Clostridium bartlettii DSM
           16795]
          Length = 639

 Score =  554 bits (1427), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 278/642 (43%), Positives = 412/642 (64%), Gaps = 16/642 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           IK+T  DGSIK F    +  D+A+SIS  LA+  VA ++NG+   L   V E   + +  
Sbjct: 2   IKVTLKDGSIKEFEGKVSVLDIAKSISEGLARAVVAASVNGETVGLDYEVCEDCELNLYK 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D     V RH+ AH++A+A++ ++P V++AIGP IE+GFYYD D +   + +ELA+IE
Sbjct: 62  FDDEEGKDVFRHTSAHMLAQALKRLYPGVKLAIGPSIENGFYYDIDLDHRITEEELAKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M++I   D    +  LS E A +  +   E YKVE++E +P  E ++ Y+QG++ DLC
Sbjct: 122 AEMKKIAKEDLKIERYELSKEDALKWAKENGEDYKVELIEELPEGEVISFYKQGDFADLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ ST +VK   KL+ VAGAYWRGD    ML RIYGT++   ++L  YL+ +EE++K
Sbjct: 182 RGPHLPSTKKVKAV-KLLSVAGAYWRGDEKNKMLQRIYGTSFEKNKDLEAYLHLMEEAKK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQ 302
           RDHRKL +E+DLF I E+G G   +  KG ++   L+ + R   K+D Y EI TP +L++
Sbjct: 241 RDHRKLGKELDLFFIPEEGPGFPLFMPKGMQLKNALLEFWREVHKEDNYVEIETPIILNR 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
           HLW+ SGHW  Y+ NM+ VK  D      + FA+KPMNCPG +  +     SYR+ P+R+
Sbjct: 301 HLWETSGHWYHYKENMYTVKIDD------QDFAIKPMNCPGGMLYYKSKPHSYRDFPMRV 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AE G V+R+E SG+LHGLMRVR FTQDDAH+F   EQ+ +E   +  LI S+YK FGF+ 
Sbjct: 355 AELGRVHRHELSGALHGLMRVRAFTQDDAHIFMLPEQIKDEIKDVVRLIDSVYKVFGFQ- 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             ++LSTRPE  +G+D  W+ AEN ++  L+ +  + +  IN G    +GAFYGPK ++ 
Sbjct: 414 YGIELSTRPEDSMGTDEEWEIAENGLREALEELGLAYE--INEG----DGAFYGPKIDFH 467

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+D +GR WQCGTIQ+D  LP RF+A Y+    EK  PVMIHR + GSIERFIGI+IE++
Sbjct: 468 LRDCLGRTWQCGTIQLDMQLPQRFDATYIGQDGEKHRPVMIHRVLLGSIERFIGILIEHY 527

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P+W++P Q  +  I+    +YA+ + + L +  L +E D R E + +KIRE  ++K
Sbjct: 528 AGKFPVWIAPTQVKILPISDKYNDYAKAVKDALFAKGLRVEIDDRAEKMGFKIREAQLEK 587

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P +++ G+KE    ++ +R         +S+ + + ++ KE
Sbjct: 588 VPYMLVVGEKEVEANAVSVRSRDKGEMGSLSVDEFVAMVCKE 629


>gi|78357681|ref|YP_389130.1| threonyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|123741221|sp|Q30Y11|SYT_DESDG RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|78220086|gb|ABB39435.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Desulfovibrio
           desulfuricans subsp. desulfuricans str. G20]
          Length = 644

 Score =  554 bits (1427), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 269/617 (43%), Positives = 401/617 (64%), Gaps = 20/617 (3%)

Query: 11  DGSIKNFPVHATGSDV-AESISRSLAKKAVAVAINGKVCDLSD--PVREGSIEIITPEDP 67
           +GS+      A+  DV  +++S    KK +A    G + DL+   P    ++E +  + P
Sbjct: 6   EGSVVEVESGASCRDVLKQALSGKKFKKVLAARCGGTMLDLTATVPTACETLEPVYADSP 65

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQ 127
             L +IRHS AH+MA+AVQ ++P V+V IGP IE+GFYYDFD E+PF++D+L  IE +M 
Sbjct: 66  EGLGLIRHSAAHVMADAVQRLFPGVKVTIGPAIENGFYYDFDYERPFTADDLEAIEAEMD 125

Query: 128 EIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPH 187
           +II    PF +  +S ++A+++F    E YK+E+++++P  + V++YR G++ DLCRGPH
Sbjct: 126 KIIKAAHPFERSVMSKDEAKKMFADMGETYKLELIDAVP-DDIVSIYRSGDFVDLCRGPH 184

Query: 188 VRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHR 247
           +  TG +  F KLM VAGAYWRGD    MLSR+YGTA+  ++EL  YL  +EE++KRDHR
Sbjct: 185 IPDTGCINAF-KLMSVAGAYWRGDEKNAMLSRVYGTAFPDEKELKSYLNRIEEAKKRDHR 243

Query: 248 KLAREMDLFHIAEDG-SGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLW 305
           KL  ++DLF   E+G SG+++WH KG  +   L  + R++ +K  Y+ + TPQ+L + LW
Sbjct: 244 KLGTQLDLFSFQEEGGSGMVYWHPKGALVRAILEDFERKEHLKRGYQIVQTPQILRRELW 303

Query: 306 QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEF 365
           ++SGH+D+YR NM+       T  D + + +KPMNC  H+ ++     SYR+LPVRL E 
Sbjct: 304 EKSGHYDNYRENMYF------TDIDEQPYGVKPMNCVAHMLIYKSRSHSYRDLPVRLFEL 357

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
           G V+R+E SG LHGL+RVR FTQDDAH+ CT +Q+ +E + + N +  +   FGFE  M 
Sbjct: 358 GVVHRHEKSGVLHGLLRVRQFTQDDAHIICTPDQLESEIVGVLNFVRDVMGVFGFEYSM- 416

Query: 426 KLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKD 485
           ++STRPEK +GSD  WD A + +      +K      +   +  G+GAFYGPK +  L+D
Sbjct: 417 EVSTRPEKSIGSDEDWDRATSAL------VKALEGQGLPYEINEGDGAFYGPKIDVKLRD 470

Query: 486 AIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
            +GR+WQC T+Q DF LP RF+  Y+    E+  PVM+HR + GS+ERFIG++ E+F G 
Sbjct: 471 CLGREWQCATVQCDFTLPDRFDLVYIGQDGERHRPVMVHRVILGSVERFIGVLTEHFAGA 530

Query: 546 LPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPI 605
            P WL+P+QA + T+T +  E+A+E    L +  + +E D RNE + YK+RE  ++KIP 
Sbjct: 531 FPTWLAPVQARLLTVTDAQNEFAEEARAALMAQGIRVEVDTRNEKLGYKVREAQLEKIPY 590

Query: 606 IIICGDKEASERSIGIR 622
           I++ GDKE   R + +R
Sbjct: 591 ILVIGDKEVEARGVNVR 607


>gi|284048337|ref|YP_003398676.1| threonyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
 gi|283952558|gb|ADB47361.1| threonyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
          Length = 636

 Score =  554 bits (1427), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 269/622 (43%), Positives = 396/622 (63%), Gaps = 16/622 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
           S+IK++ PDGS+K F   ++   +A+S+++ L K A+   ++G+  DLSD +  +  +E 
Sbjct: 2   SNIKVSLPDGSVKEFEAGSSLLSIAKSLNQKLGKTALLAKVDGENKDLSDVLDHDAKVEF 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +TP+    L  IRH+ +H+MA+A+Q ++P  + AIGP IE GFYYD D +  F+ D+L  
Sbjct: 62  VTPDSEEGLHAIRHTASHVMAQAIQHLFPGTKFAIGPAIEKGFYYDLDSDHVFTPDDLRA 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK+M +II  + P ++  +   +A   F+++ E YKVE++E +P    ++ Y QG++ D
Sbjct: 122 IEKEMSKIIKANYPLVRNEIPRAEALAKFKAEDEPYKVELIEDLPEDAVISTYTQGDFTD 181

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LC GPH  STG+VK F KLM +AGAYWRGD +  ML RIYGTA+ ++++L  YL+ +EE+
Sbjct: 182 LCAGPHCPSTGRVKAF-KLMSIAGAYWRGDEHNKMLQRIYGTAFASKEDLEAYLHMMEEA 240

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           EKRDHRKL +++ LF +++ G G  F+   G  I  TLI Y R    K  Y+E+ TP ++
Sbjct: 241 EKRDHRKLGKQLGLFMLSDYGPGFPFFLPNGMIIRNTLIDYWREVHRKYGYQEVMTPMIM 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ LW+ SGHWD Y+ NM+  +   D       +A+KPMNCPG + V+ +   SY+ELP+
Sbjct: 301 NRQLWETSGHWDHYKENMYFTQIDGDD------YAIKPMNCPGGMLVYANEPHSYKELPL 354

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+ E G V+R+E SG+LHGL RVR FTQDDAH+F    Q+ +   +   L   +Y  FG 
Sbjct: 355 RVGELGLVHRHELSGALHGLFRVRCFTQDDAHIFMMPNQIEDVIQETIRLFDEVYATFGL 414

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
                +LSTRP+  +G DA W+   N ++  +D         +   +  G+GAFYGPK +
Sbjct: 415 -TYHAELSTRPDNSMGDDATWEMTTNALRKAMDDFG------LKYSINEGDGAFYGPKID 467

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           + LKD+IGR WQCGTIQ+D  LP +FN  Y     +K  PVMIHR V+GSIERFIGI+IE
Sbjct: 468 FHLKDSIGRTWQCGTIQLDMLLPEKFNLTYTGEDGQKHRPVMIHRVVYGSIERFIGILIE 527

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           N+ G  P WL+P Q  V  IT    EYA++I + L++  +    D RNE + YKIRE  +
Sbjct: 528 NYAGAFPAWLAPEQVRVMPITDKYNEYAKQIVDKLEAQKIRAHLDDRNEKVGYKIREAQV 587

Query: 601 KKIPIIIICGDKEASERSIGIR 622
           KK+P ++I G+KE    ++ +R
Sbjct: 588 KKVPYMLIVGEKEVESGTVSVR 609


>gi|291559712|emb|CBL38512.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase
           [butyrate-producing bacterium SSC/2]
          Length = 641

 Score =  554 bits (1427), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 275/629 (43%), Positives = 406/629 (64%), Gaps = 17/629 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K+T  DGS+K +  + +  D+A+ IS  LA+ A A  ++G+V DL   + ++  + I+T
Sbjct: 1   MKITLKDGSVKEYENNMSVIDIAKDISEGLARVACAGEVDGEVVDLRTVIDKDCELNILT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +        RH+ +HI+A+AV+ ++PE ++AIGP I++GFYYD +K+ PF+ ++L +IE
Sbjct: 61  FDSDEGKHAFRHTASHILAQAVKRLYPETKLAIGPSIDNGFYYDMEKDTPFTQEDLEKIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M++I+  +          ++A    + + E YKVE++E +P    ++ Y+QGE+ DLC
Sbjct: 121 KEMKKIVKENLEITSFTKPRDEAIAFMKERNEPYKVELIEDLPEDSVISFYQQGEFVDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+ +T  VK F KL  +AGAYWRGD +  ML+RIYGTA+  + EL  YL  +EE+ K
Sbjct: 181 AGPHLMTTKPVKAF-KLTSIAGAYWRGDEHNQMLTRIYGTAFTKKAELDAYLTMMEEARK 239

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           RDHRKL +E+ LF + E+G G  F+  KG  +  TL+ Y R    K  Y EI+TP +L +
Sbjct: 240 RDHRKLGKELGLFMMREEGPGFPFFLPKGMVLKNTLLDYWREIHQKAGYVEISTPIMLSR 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
           HLW+ SGHWD Y+ NM+       T+ D + FA+KPMNCPG V V++   +SYR+LP+R+
Sbjct: 300 HLWETSGHWDHYKENMYT------TVIDDQDFAIKPMNCPGGVLVYDSEPRSYRDLPLRM 353

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            E G V+R+E SG LHGLMRVR FTQDDAH+F T +Q+ +E   +  LI  +Y  FGF K
Sbjct: 354 GELGLVHRHEKSGQLHGLMRVRCFTQDDAHIFMTPDQIKDEIKGVAGLIDQVYNLFGF-K 412

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRP+  +GSD  W+ A + ++  LD +       ++  V  G+GAFYGPK ++ 
Sbjct: 413 YHVELSTRPDDSMGSDEDWELATDSLRAALDDLG------LDYVVNEGDGAFYGPKIDFH 466

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+D+IGR WQCGTIQ+DF LP RF+  Y  +  EK  P+MIHR  FGSIERFIGI+IE+F
Sbjct: 467 LEDSIGRTWQCGTIQLDFQLPLRFDLHYTGADGEKHRPIMIHRVAFGSIERFIGILIEHF 526

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P+Q  V  I+   ++YA ++ + LK+  +  + D R E + YKIRE  ++K
Sbjct: 527 AGAFPTWLAPVQVEVIPISDKHLDYANKVLDTLKAAGIRADIDTRAEKMGYKIREAQLQK 586

Query: 603 IPIIIICGDKEASERSIGIR-RFGSTTTQ 630
           IP +++ G KE    ++ +R RF     Q
Sbjct: 587 IPYMLVVGGKEEENGAVSVRSRFKGDEGQ 615


>gi|227498537|ref|ZP_03928681.1| conserved hypothetical protein [Acidaminococcus sp. D21]
 gi|226903993|gb|EEH89911.1| conserved hypothetical protein [Acidaminococcus sp. D21]
          Length = 636

 Score =  554 bits (1427), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 273/644 (42%), Positives = 405/644 (62%), Gaps = 16/644 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
           + I ++ PDGS + F    +  D+A+S+++ L K A+   ++G   DL+D + R+ ++E 
Sbjct: 2   AKINVSLPDGSKREFEAGISLLDIAKSLNQKLGKTALLAKVDGVNKDLADSLDRDAAVEF 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           ITP+ P  L  IRH+ +H+MA+A+Q ++P  + AIGP IE GFYYD D E  F+ D+L  
Sbjct: 62  ITPDSPEGLHAIRHTASHVMAQAIQHLFPGTKFAIGPAIEKGFYYDLDSEHVFTPDDLKA 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK+M +I+ ++ P ++  +   +A   F+++ E YKVE++E +P    ++ Y QG++ D
Sbjct: 122 IEKEMAKIVKQNLPVVRHEIPRAEALAKFKAENEPYKVELIEDLPEDAVISTYSQGDFTD 181

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LC GPH  STG+VK F KLM +AGAYWRGD    ML RIYGTA+ ++++L  YL+ LEE+
Sbjct: 182 LCAGPHCPSTGRVKAF-KLMSIAGAYWRGDEKNKMLQRIYGTAFASKEDLEAYLHMLEEA 240

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           EKRDHRKL +++ LF +++ G G  F+   G  +   LI+Y R    K +Y E++TP ++
Sbjct: 241 EKRDHRKLGKQLGLFMLSDYGPGFPFFLPNGMILRNELINYWREVHRKYNYYEVSTPMIM 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ LW+ SGHWD Y+ NM+  K       D   +A+KPMNCPG + V++    SYR+LP+
Sbjct: 301 NRQLWETSGHWDHYKENMYFTKI------DGEDYAIKPMNCPGGMLVYDSEPHSYRDLPL 354

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+ E G V+R+E SG+LHGL RVR FTQDDAH+F    Q+ +   +   L   +Y  FG 
Sbjct: 355 RVGELGLVHRHELSGALHGLFRVRCFTQDDAHIFMMPNQIEDVIQETIRLFDEVYATFGL 414

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
                +LSTRP+  +G DA W+   N ++  +D         +   V  G+GAFYGPK +
Sbjct: 415 -TYHAELSTRPDNSMGDDATWEMTTNALRKAMDDFG------LKYVVNEGDGAFYGPKID 467

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           + LKD+IGR WQCGTIQ+D  LP +FN  Y     +K  PVMIHR V+GSIERFIGI+IE
Sbjct: 468 FHLKDSIGRTWQCGTIQLDMLLPEKFNLTYTGEDGQKHRPVMIHRVVYGSIERFIGILIE 527

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           N+ G  P WL+P Q  V  IT    EYA+ + + +++  +    D RNE I YKIRE  +
Sbjct: 528 NYAGAFPAWLAPEQVRVMPITDKFNEYAKSVVDKMEALGIRAHLDDRNEKIGYKIREGQV 587

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KK+P +++ G+KEA+  ++ +R         +++ + I  L KE
Sbjct: 588 KKVPYMLVVGEKEATNGTVSVRSRSEGEMGAMAVDEFIAKLQKE 631


>gi|167758905|ref|ZP_02431032.1| hypothetical protein CLOSCI_01251 [Clostridium scindens ATCC 35704]
 gi|167663312|gb|EDS07442.1| hypothetical protein CLOSCI_01251 [Clostridium scindens ATCC 35704]
          Length = 641

 Score =  553 bits (1426), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 277/639 (43%), Positives = 407/639 (63%), Gaps = 19/639 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDL-SDPVREGSIEIIT 63
           +K+T  DGS K +    +  D+A+ IS  LA+ A    I+G + DL +D  ++  +E++T
Sbjct: 1   MKITLKDGSEKGYERSMSVLDIAKDISEGLARAATCAKIDGDIVDLRTDVSKDCELELLT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +         H+ +HIMA+A++ ++PE ++AIGP I++GFYYD D+E PF +++L +IE
Sbjct: 61  FDSEDGRGAFWHTTSHIMAQAIKRLYPETKLAIGPSIDNGFYYDLDRETPFVAEDLEKIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M++I+    P  +   + E+A   F+   E YKVE++E +P  E ++ Y+QGE+ DLC
Sbjct: 121 AEMKKIVKEALPIERFTKTREEAIAYFKENDEPYKVELVEDLPEGEEISFYKQGEFVDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+ ST  VK F KL  +AGAYWRG     ML+RIYG ++  + +L +YL+ +EE++K
Sbjct: 181 AGPHLMSTKAVKAF-KLTSLAGAYWRGSEKNKMLTRIYGISYPKKADLEEYLHMMEEAKK 239

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQ 302
           RDHRKL RE+ LF + ++G G  F+  KG  +  TL+ Y R   K++ Y E++TP +L +
Sbjct: 240 RDHRKLGRELGLFMMCDEGPGFPFFLPKGMVLKNTLLDYWRELHKENGYVEVSTPIILSR 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
           HLW+ SGHWD Y+ NM+       T+ D   +A+KPMNCPG + V+    +SY++LP+R+
Sbjct: 300 HLWENSGHWDHYKDNMYT------TMIDEEDYAVKPMNCPGGMLVYKSEPRSYKDLPLRM 353

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            E G V+R+E SG+LHGL RVR FTQDDAH+F T EQ+ +E   +  LI  IY  FGF K
Sbjct: 354 GELGLVHRHEKSGALHGLFRVRCFTQDDAHIFMTPEQIRDEIKGVARLIDEIYSLFGF-K 412

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRP+  +GSD  W+ A   ++G LD +       ++  V  G+GAFYGPK ++ 
Sbjct: 413 YHVELSTRPDNSMGSDEDWEMATEGLRGALDDLG------LDYMVNEGDGAFYGPKIDFH 466

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+D+IGR WQCGTIQ+D  +P RF+  Y  +  EK  P+MIHR  FGSIERFIGI+IE+F
Sbjct: 467 LEDSIGRTWQCGTIQLDMQMPQRFDLEYTGADGEKHRPIMIHRVAFGSIERFIGILIEHF 526

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P+Q  V  I+   +EY +++   L+   +  E D R E I YKIRE  + K
Sbjct: 527 AGAFPTWLAPVQVKVLPISEKHLEYGKKVLEQLEEAGIRAELDERAEKIGYKIREAQMNK 586

Query: 603 IPIIIICGDKEASERSIGIR-RFGSTTTQK--VSLLDAI 638
           IP +++ G KE  +  + +R RF     QK   S +DAI
Sbjct: 587 IPYMLVVGAKEEEQNLVSVRSRFAGDEGQKDIASFIDAI 625


>gi|319790149|ref|YP_004151782.1| threonyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
 gi|317114651|gb|ADU97141.1| threonyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
          Length = 658

 Score =  553 bits (1426), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 274/640 (42%), Positives = 412/640 (64%), Gaps = 32/640 (5%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           + +  PDGS   F    T  ++A  I++SL K AV    NG++ D+  P+ E G I IIT
Sbjct: 2   VVIELPDGSKLEFQGPTTVKEIAGKIAKSLEKNAVGAVFNGELIDVHTPITESGRIRIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWP--EVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           P+DP SL ++RHS AH++A+AV+ ++   EV++ IGP  ++GFYYDFD     S ++L +
Sbjct: 62  PKDPESLEILRHSAAHLLAKAVKKLYGNNEVKLGIGPATQEGFYYDFDLPVSISEEDLPK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE-WF 180
           IE +M++I+    PF ++ +S EKARELF  K + YK+++LESIP +E V++Y  GE +F
Sbjct: 122 IEAEMEKIVKAKEPFRREVISREKARELF--KNDPYKLKLLESIPEEEEVSIYWLGEDFF 179

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLC+GPHV   GQ+K F KL+ VAGAYWRGDS   ML RIYGTA+  ++EL ++L+ LEE
Sbjct: 180 DLCKGPHVEHAGQIKAF-KLLSVAGAYWRGDSRNKMLQRIYGTAFWKKKELEEFLHRLEE 238

Query: 241 SEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQ 298
           ++KRDHR L +++DLF I E+ G G++FWH  G  I Q +  ++  +  K  Y+ I TP 
Sbjct: 239 AKKRDHRVLGKQLDLFGIYEEAGPGLVFWHPNGAIIRQEIEQWVEEEHRKRGYQRIYTPH 298

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCAD----------------DTIKDLRTFALKPMNCP 342
           ++   LW++SGH++ YR NMF V   +                  I+    +A+KPMNCP
Sbjct: 299 IMKADLWKRSGHYNFYRENMFFVPVVEHDEEERLGNDEVPLTCSEIEKAHWYAVKPMNCP 358

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN 402
           GH+ ++   ++SYR+LP+R  EFG+VYR E SGSLHGL+RVRGFTQDD H+FC  +Q+  
Sbjct: 359 GHILIYKSQVRSYRDLPIRFFEFGTVYRYEKSGSLHGLLRVRGFTQDDGHIFCRPDQLKE 418

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
           E   + + I+ +   F  + + + + TRPEK +G++  W+ A N +      I+   +  
Sbjct: 419 EIQGVMDYIMDLLSTFKLDYV-INVGTRPEKFIGTEEAWEHATNAL------IEALKERG 471

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
               ++ G+GAFYGPK +  + DAIGR W   TIQVDFNLP RF+  YV+   +K  PVM
Sbjct: 472 FEYNIVEGDGAFYGPKIDIAVLDAIGRKWDGPTIQVDFNLPERFDLTYVDRDGQKKRPVM 531

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSI 582
           +HRA+ GSIERFIG++IE++ G  P WL+P+QA++  ++   ++YA E+   LK   + +
Sbjct: 532 VHRAIMGSIERFIGLLIEHYAGLFPTWLAPVQAVIIPVSDKYLDYADEVYAKLKEAGIRV 591

Query: 583 ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           + D  +  + YKIR+   +KIP ++I G++E   +++ +R
Sbjct: 592 KLDDESAKVGYKIRKAETQKIPYMLIVGEREKENQTVSVR 631


>gi|307298932|ref|ZP_07578734.1| threonyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306915357|gb|EFN45742.1| threonyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 648

 Score =  553 bits (1426), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 281/649 (43%), Positives = 412/649 (63%), Gaps = 23/649 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I +  PDGSIK +    T +++A+ IS  LA++A    ++ ++ DL  P+ ++ S++++ 
Sbjct: 3   ISIKLPDGSIKEYESGITPAEIAKGISEGLARRAFGAIVDEELWDLERPIEKDASVKLVL 62

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIW--PEVQVAIGPIIEDGFYYDFD-KEQPFSSDELA 120
            +DP S    RH+ +HI+A+A+  ++   +V++AIGP IE+GFYYD D  E   + ++L 
Sbjct: 63  DKDPESSRFFRHTMSHILAQAIMRLYGKEKVKLAIGPTIENGFYYDIDLGETRITEEDLP 122

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESI---PAKENVTLYRQG 177
           +IE +M +II  D P  +  L   +A EL + + + YKV+++E +      E VT Y+QG
Sbjct: 123 KIESEMSKIIKEDLPVERFELPVSEAIELMKREDQPYKVQLIEDLVKDTGAEKVTFYKQG 182

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           E+ DLCRGPHV STG+VK +FKL  V+GAYWRGD N  ML R+YGTA+  + +L  YL  
Sbjct: 183 EFVDLCRGPHVSSTGKVK-YFKLTSVSGAYWRGDENNKMLQRVYGTAFAKKSDLEDYLRM 241

Query: 238 LEESEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEIN 295
           +EE++KRDHRKL   + LF I  E   G+  +  KG ++   L+ + R K ++D Y E++
Sbjct: 242 IEEAKKRDHRKLGPALGLFTINYEYAPGMPVFLPKGTEMLNQLLQFSREKHVEDGYREVS 301

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TPQ++   LW+ SGHWD YR NM+       T K+ + FA+KPMNCPGH+ V+     SY
Sbjct: 302 TPQIMSDALWRTSGHWDHYRDNMYF------TEKEDQQFAVKPMNCPGHIIVYKSSSVSY 355

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           R+LP++L EFG V+R E SG LHGL RVRGF QDDAH+FCT+EQ+  E + + + +  IY
Sbjct: 356 RDLPMKLFEFGKVHRYERSGVLHGLFRVRGFVQDDAHIFCTREQIQQEIMGVIDFVQKIY 415

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
             F FE    +LSTRPE  +G   LWD A   ++  L  +    + ++N G    +GAFY
Sbjct: 416 SPFNFE-YRAELSTRPEDYMGEVELWDIATKALEDSL--LAKKMEFKVNEG----DGAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +Y +KD++GR+WQC TIQ+DF +P RF   YV   +E+  PVMIHRA+FGS+ERF+
Sbjct: 469 GPKIDYHIKDSLGREWQCATIQLDFMMPERFGIKYVGPDNEEYQPVMIHRAIFGSVERFM 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
           GI+IE+F G  P WL+P Q  V  I     EYA+ +A  LKS    +E D R ++ NYKI
Sbjct: 529 GILIEHFAGAFPAWLAPTQVSVIPIADRHAEYAESVAAELKSRGFRVEVDDRQKSTNYKI 588

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           RE  + K+P +II GD+E  + +I +R         ++L + +  L++E
Sbjct: 589 REAQLMKVPYMIIVGDREKEDGTISVRLRSEKDLGSIALQEFMDKLSQE 637


>gi|153855829|ref|ZP_01996815.1| hypothetical protein DORLON_02836 [Dorea longicatena DSM 13814]
 gi|149751870|gb|EDM61801.1| hypothetical protein DORLON_02836 [Dorea longicatena DSM 13814]
          Length = 645

 Score =  553 bits (1426), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 282/643 (43%), Positives = 407/643 (63%), Gaps = 18/643 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           +K+T  DGS K +    +  D+ + IS  LA+ A +  +NG+V DL   V E   +EI+T
Sbjct: 4   MKITLKDGSFKEYEGSMSVLDITKDISEGLARVATSARVNGEVVDLRHVVSEDCELEILT 63

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            ++        H+ +HIMA+A++ ++P+ ++AIGP IE+GFYYD D+E PF +++L +IE
Sbjct: 64  FDNEEGKGAFWHTTSHIMAQAIKRLYPDTKLAIGPSIENGFYYDVDRETPFVAEDLEKIE 123

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M++I+    P  +   + E+A   F+ K E YKVE++E +P  E ++ Y+QGE+ DLC
Sbjct: 124 KEMKKIVKEALPIERFTKTREEAIAYFKEKDEPYKVELIEDLPEGEEISFYQQGEFVDLC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+ +T  VK F KL  +AGAYWRG     ML+RIYG ++  +  L +YL  LEE+++
Sbjct: 184 AGPHLMTTKPVKAF-KLTSLAGAYWRGSEKNKMLTRIYGISYPKKALLDEYLTMLEEAKR 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           RDHRKL +E+ LF + E+G G  F+  KG  +  TL+ Y R    K  Y E++TP +L +
Sbjct: 243 RDHRKLGKELGLFMMCEEGPGFPFFLPKGMVLKNTLLDYWRELHKKAGYVEVSTPIILSR 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
           HLW+ SGHWD Y+ NM+  +       D   FA+KPMNCPG + V+    +SY++LP+R+
Sbjct: 303 HLWETSGHWDHYKENMYTTQI------DGEDFAIKPMNCPGGMLVYKAEPRSYKDLPLRV 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            E G V+R+E SG LHGLMRVR FTQDDAH+F   EQ+ +E   +  LI  +Y+ FGF K
Sbjct: 357 GELGLVHRHEKSGQLHGLMRVRCFTQDDAHIFMMPEQIRDEIKGVVALIDEVYQLFGF-K 415

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +GSD  W+ A   ++G L+ +       ++  V  G+GAFYGPK ++ 
Sbjct: 416 YHVELSTRPEDSMGSDEDWELATEGLRGALNDLG------LDYVVNEGDGAFYGPKIDFH 469

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D+IGR WQCGTIQ+D  LP RF   Y  +  EK  P+MIHR  FGSIERFIGI+IE+F
Sbjct: 470 LTDSIGRTWQCGTIQLDMQLPQRFELEYTGADGEKHRPIMIHRVAFGSIERFIGILIEHF 529

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P+Q  V  I+   +EY Q++ + L +  +  E D R E I YKIRE  ++K
Sbjct: 530 AGAFPTWLAPVQVKVLPISDKHLEYGQKVLDTLNAAGIRAEIDTRAEKIGYKIREAQMQK 589

Query: 603 IPIIIICGDKEASERSIGIR-RFGSTTTQKVSLLDAIPILTKE 644
           IP +++ G KE  E  + +R RF     QK SL + +  +T+E
Sbjct: 590 IPYMLVVGAKEEEENLVSVRSRFAGDEGQK-SLDEFVASVTEE 631


>gi|331085681|ref|ZP_08334764.1| threonyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA]
 gi|330406604|gb|EGG86109.1| threonyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA]
          Length = 643

 Score =  553 bits (1426), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 285/643 (44%), Positives = 409/643 (63%), Gaps = 18/643 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K+T  DGS+K +    +  ++A  IS  LA+ A A  +NG+V DL   + ++  + I T
Sbjct: 1   MKITLKDGSVKEYSEAKSVYEIAADISEGLARMATAGEVNGEVIDLRTKIDQDCELTIHT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +        RH+ +HI+A+AV+ ++P+ ++AIGP I+DGFYYDFD+E PF++++L  IE
Sbjct: 61  FQSQEGAHAFRHTTSHILAQAVKRLFPDTKLAIGPAIDDGFYYDFDREVPFTTEDLETIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M++I+  D    +  L  E+A  L + K+E YKVE++E +P    ++ Y+QGE+ DLC
Sbjct: 121 KEMKKIVKEDLKIEQFTLPREEAIALMKEKEEPYKVELIEDLPEDAVISFYKQGEFTDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+ ST  VK F KL  +AGAYWRG     ML+RIYGT++  + +L +YL  +EE++K
Sbjct: 181 AGPHLLSTKSVKAF-KLTSLAGAYWRGSEKNKMLTRIYGTSFTKKADLDEYLAKIEEAKK 239

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           RDHRKL +E+ LF I E+G G   +  KG  +  TLI Y R    +  Y EI+TP +L++
Sbjct: 240 RDHRKLGKELGLFTILEEGPGFPIFLPKGMILKNTLIDYWREVHTRAGYVEISTPIMLNK 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW  Y+ NM+       T+ D   FA+KPMNCPG + V+     SYR+LP+R+
Sbjct: 300 QLWETSGHWAHYKENMYT------TVIDEEDFAIKPMNCPGGILVYKTEPHSYRDLPLRM 353

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            E G+V+R+E SG+LHGLMRVR FTQDDAH+F T+EQ+ +E   +  LI  +Y  FGF K
Sbjct: 354 GELGTVHRHEKSGALHGLMRVRSFTQDDAHIFMTREQIKDEIKGVARLIDEVYSLFGF-K 412

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LST+PE  +GS   WD A + ++  LD ++      +   +  G+GAFYGPK ++ 
Sbjct: 413 YHVELSTKPEDSMGSQEDWDIATDALRSALDELQ------LPYVINEGDGAFYGPKIDFH 466

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+D +GR WQCGTIQ+DF LP RF   Y+ +  EK  P+M+HR VFGSIERFIGI+IE+F
Sbjct: 467 LEDTLGRTWQCGTIQLDFQLPLRFEMEYIAADGEKHRPIMVHRVVFGSIERFIGILIEHF 526

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P Q  V  I+    EYA E+A  LK   +    D R+E I YKIR+  + K
Sbjct: 527 AGAFPTWLAPEQVKVLPISEKYHEYANEVAAKLKEAKIRCSVDERSEKIGYKIRDARLNK 586

Query: 603 IPIIIICGDKEASERSIGIR-RFGSTTTQKVSLLDAIPILTKE 644
           IP +++ G KE  E  + +R RF     Q+ SL   I  +T+E
Sbjct: 587 IPYMLVVGAKEQEEGVVSVRSRFLGDEGQR-SLDTFIAEITEE 628


>gi|258515613|ref|YP_003191835.1| threonyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
 gi|257779318|gb|ACV63212.1| threonyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
          Length = 634

 Score =  553 bits (1425), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 284/642 (44%), Positives = 400/642 (62%), Gaps = 16/642 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           IK++  DGS + +    T   VAE IS  LA+ A+A  INGK  DLS  + +  S+EI+T
Sbjct: 2   IKVSLKDGSTREYEPGITIIQVAEDISPGLARSALAGKINGKAVDLSTALEDNVSLEILT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
             DP    + RHS +H++A+AVQ ++P  ++AIGP I+DGFYYDFD E  F+  ++ +IE
Sbjct: 62  FNDPEGQEIYRHSSSHVLAQAVQRLFPGTKLAIGPAIKDGFYYDFDSEHKFTPADMEKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M +II  + PF +  LS  +A + F    E YKVE++  +P    ++ Y QG W DLC
Sbjct: 122 AEMNKIIKENQPFKRFELSRAEAIDKFTDLDEKYKVELINDLPGDAVISCYEQGGWCDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPHV STG +K   KL  +AGAYWRG     ML R YGT++  +  L +++  +EE+++
Sbjct: 182 AGPHVPSTGSLKAV-KLTSLAGAYWRGSEKNKMLQRFYGTSFPKKALLDEHINRIEEAKR 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQ 302
           RDHRKL  E++LF + E+G G  F+H KG  +   L  + R++  K  Y+EI TP +L++
Sbjct: 241 RDHRKLGAELELFSVMEEGPGFPFFHPKGMILRNELEKFWRQEHEKRGYQEIRTPIILNR 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+QSGHWD Y+ NM+  +       D   FA+KPMNCPG + ++   L SYRE P+R+
Sbjct: 301 VLWEQSGHWDHYKENMYFTQI------DNFDFAVKPMNCPGSMLIYKSKLHSYREFPIRM 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            E G V+R+E SG LHGLMRVR FTQDDAH+F    Q+ +E + + +L+   Y  FGF K
Sbjct: 355 GELGLVHRHELSGVLHGLMRVRCFTQDDAHIFMLPGQVKDEIIGVIDLVDDFYSIFGF-K 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LST+PEK +GSD +WD A N +K  ++         ++  V  G+GAFYGPK ++ 
Sbjct: 414 YHVELSTKPEKAMGSDEVWDMATNTLKEAIEA------KGLDYKVNEGDGAFYGPKIDFH 467

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+D +GR WQCGTIQ+DF +P +F+  YV    +K  PVM+HR VFGSIERFIGI+ E+F
Sbjct: 468 LEDCLGRTWQCGTIQLDFLMPEKFDLSYVGEDGQKHRPVMLHRVVFGSIERFIGILTEHF 527

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P+Q  V  IT    +YA  + + LK   + +E D RNE I YKIRE   +K
Sbjct: 528 AGAFPTWLAPVQVRVLPITDRQSDYAVRVVDRLKETGIRVELDQRNEKIGYKIREAQTQK 587

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IP +++ GDKE  +  + IR          +L D I  L +E
Sbjct: 588 IPYMLVIGDKELEKELVAIRHRSQGDLGISTLEDFIDKLQEE 629


>gi|225181661|ref|ZP_03735101.1| threonyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
 gi|225167642|gb|EEG76453.1| threonyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
          Length = 636

 Score =  553 bits (1425), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 275/619 (44%), Positives = 395/619 (63%), Gaps = 16/619 (2%)

Query: 6   KLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITP 64
           K+T PDGS++ +    T SDV   +   L K+AVA  +NG V DL+  + E   +  +T 
Sbjct: 4   KVTLPDGSVREYTDGTTVSDVVADLGGRLKKEAVAAKVNGVVRDLTYTLTEDAEVRFLTF 63

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
            D     V RH+ +HI+A AV+ ++  V++ IGP I+DGFYYDFD  + F   +L +IEK
Sbjct: 64  ADDEGAEVYRHTSSHILALAVKRLFKGVKLGIGPAIKDGFYYDFDYSESFVPADLEKIEK 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
           +M++II    P  +  L  ++A E F    E YKVE+++ +P    ++ YR GE+ DLC 
Sbjct: 124 EMEKIIKESLPLERFELERQEAVEYFNKLGEDYKVELIQDLPEDAVISCYRCGEFVDLCA 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPH+ +TG+VK   KL+ +AGAYWRG  N PML RIYGT++  + +L +YL+ LEE++KR
Sbjct: 184 GPHLPTTGRVKAV-KLLNLAGAYWRGSENNPMLQRIYGTSFPKRSQLDEYLHRLEEAKKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQH 303
           DHRKL RE+DLF I ++G G    H +G  I   L  + R +  K  Y+EI TP +L++ 
Sbjct: 243 DHRKLGRELDLFSIQDEGPGFPLLHPRGMIIRNALEEFWREEHRKAGYDEIKTPIILNRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SGHWD Y+ NM+  K       D + F++KPMNCPG + V+   + SYR+LPVR+ 
Sbjct: 303 LWERSGHWDHYQENMYFTKI------DEQDFSVKPMNCPGSMLVYKTKMHSYRDLPVRMG 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           E G V+R+E SG+LHG+MRVR FTQDDAH+F    Q+  E  K+  L   +Y  FGF+  
Sbjct: 357 ELGLVHRHELSGTLHGMMRVRAFTQDDAHIFMLPSQIKEEVAKVIELTDRVYNVFGFD-Y 415

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            V+LST+PEK +GSD +WD A N ++ VL+  +   Q  IN G    +GAFYGPK ++ L
Sbjct: 416 HVELSTKPEKAMGSDEMWDVATNALREVLE--ERGMQFVINEG----DGAFYGPKIDFHL 469

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D+IGR WQCGTIQ+DF +P +F+  YV    +K  P +IHR ++GSIERF+ ++IE+F 
Sbjct: 470 QDSIGRTWQCGTIQLDFQMPEKFDIHYVGEDGQKHRPAVIHRVIYGSIERFMAVLIEHFA 529

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P+WL+P Q +V  IT    +YAQ +    +   +  E D RNE I YKIRE  ++K+
Sbjct: 530 GAFPVWLAPQQVVVLPITDKHHQYAQTLVERFREAGVRAEADVRNEKIGYKIREAQVQKV 589

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++ GDKE     + +R
Sbjct: 590 PYMLVVGDKEMEAGQVSVR 608


>gi|158321007|ref|YP_001513514.1| threonyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
 gi|158141206|gb|ABW19518.1| threonyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
          Length = 636

 Score =  553 bits (1425), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 271/622 (43%), Positives = 398/622 (63%), Gaps = 16/622 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           S++ +   DGSI+      +  D A+ IS  LA+ A    ++GK  DL   + E   + I
Sbjct: 2   SNVNVKLKDGSIRQVAKGTSILDFAKEISEGLARVATGAELDGKKVDLMTKIEEDCELNI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +  ED      +RH+ +HI+A+AV+ ++P  ++AIGP +++GFYYDFD E  F+ ++L +
Sbjct: 62  LRFEDENGKDFLRHTSSHILAQAVKRLYPGTKLAIGPSVDNGFYYDFDSEHVFTPEDLVK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK+M++I+  D    K  L   +A E  + + E YKVE+++ +P  E ++ YRQGE+ D
Sbjct: 122 IEKEMEKIVKEDLALEKFVLPRNEAIEFAKKQGEDYKVELIQDLPEDEVISFYRQGEFTD 181

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LC GPHV STG+VK   KL+ +AGAYWRG     ML RIYGT++  + +L ++L  LEE+
Sbjct: 182 LCAGPHVPSTGKVKAI-KLLSIAGAYWRGSEKNKMLQRIYGTSFTKKSDLEEHLNRLEEA 240

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVL 300
           +KRDHRKL +E+DLF + E+G G  F+H +G  +   L ++ R + +K  Y+EI TP +L
Sbjct: 241 KKRDHRKLGKELDLFSLQEEGPGFPFFHPRGMVLRNALENFWREEHVKRGYDEIKTPIIL 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ LW+QSGHWD Y+ NM+  K  D        +A+KPMNCPG + ++N    SYR+ P+
Sbjct: 301 NEKLWRQSGHWDHYQENMYFTKIDDGD------YAIKPMNCPGSILMYNRKKHSYRDFPI 354

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+ E G V+R+E SG+LHGLMRVR FTQDDAH+F   EQ+  E + I + +  +Y  FGF
Sbjct: 355 RMGELGIVHRHELSGALHGLMRVRNFTQDDAHLFVLPEQIKEEIIGIIDFVDYVYNIFGF 414

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
            K  ++LSTRPE  +G+D  W+ A   +KG LD  + S   +IN G    +GAFYGPK +
Sbjct: 415 -KYHIELSTRPENSMGTDEEWELAIGSLKGALDEKELSY--KINEG----DGAFYGPKID 467

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           + L+D IGR WQCGTIQ+DF +P RF+  YV +  E   P+M+HR +FGS+ERFI I+IE
Sbjct: 468 FHLEDCIGRTWQCGTIQLDFQMPQRFDMNYVGADGENHRPIMLHRVIFGSVERFIAILIE 527

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           ++ G  P WL+PIQ  +  I     EYA ++   +K+  + +E D RNE I YKIRE  +
Sbjct: 528 HYAGKFPAWLAPIQVQILPIADKHHEYAIKLEREMKARGIRVEVDSRNEKIGYKIREAQL 587

Query: 601 KKIPIIIICGDKEASERSIGIR 622
            K+P +++ GDKE     + +R
Sbjct: 588 SKVPYMLVIGDKEMEAGEVAVR 609


>gi|213623005|ref|ZP_03375788.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-2068]
          Length = 523

 Score =  553 bits (1424), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 260/533 (48%), Positives = 370/533 (69%), Gaps = 16/533 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D SD +  + ++ IIT +
Sbjct: 4   ITLPDGSQRHYDHPVSPMDVALDIGPGLAKATIAGRVNGELVDASDLIENDATLSIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ +WP  ++AIGP++++GFYYD D ++  + +++  +EK+
Sbjct: 64  DEEGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVVDNGFYYDVDLDRTLTQEDVEALEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+  ++   +K+ +S  +ARE F  + E+YKV IL E+I   +   LY   E+ D+CR
Sbjct: 124 MHELAEKNYDVIKKKVSWHEARETFVKRGESYKVSILDENIAHDDKPGLYHHEEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKLMK AGAYWRGDSN  ML RIYGTAW  ++ L  YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLMKTAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF+ L  ++R K+K+  Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHWD+Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWDNYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  FGFEKI
Sbjct: 357 EFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQIRDEVNACIRMVYDMYSTFGFEKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRP+KR+GSD +WD AE  +   L+      ++ I     LGEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPDKRIGSDEMWDRAEADLAVALE------ENNIPFEYQLGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
            D + R WQCGT+Q+DF+LPSR +A YV   +E+  PVMIHRA+ GS+ERFIG
Sbjct: 471 YDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIG 523


>gi|302387069|ref|YP_003822891.1| threonyl-tRNA synthetase [Clostridium saccharolyticum WM1]
 gi|302197697|gb|ADL05268.1| threonyl-tRNA synthetase [Clostridium saccharolyticum WM1]
          Length = 629

 Score =  552 bits (1423), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 274/620 (44%), Positives = 403/620 (65%), Gaps = 16/620 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           +K+   DG+++N+    T   + + +S  LA+ A A  +NG + DL   + E  S+ I+T
Sbjct: 1   MKIQLKDGAVRNYEKPITVIKITKELSEGLARVACAGEVNGNLVDLRYEINEDSSLSILT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            ED +  +  RH+ +HI+A+A++ ++P  ++AIGP IEDGFYYDFD E+  S+D+L+ IE
Sbjct: 61  FEDEKGKSSFRHTTSHILAQAIKRLYPGAKLAIGPAIEDGFYYDFDFEKAISNDDLSAIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M++I+  +    +  L+ ++A    + + E YKV+++  +P  E ++ Y QG++ DLC
Sbjct: 121 NEMKKIVKENFEIKRFTLNRDEAIAFMKKRGEDYKVQLINDLPKDEEISFYEQGDFVDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+ ST  VK F KL  VAGAYWRG+    ML+RIYGT++    EL +YL  +EE++K
Sbjct: 181 AGPHLLSTKYVKAF-KLTSVAGAYWRGNEKNKMLTRIYGTSFPKSSELEEYLTRMEEAKK 239

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           RDHRKL +E+ LF + ++G G  F+  KG  +   LI Y R+   ++ Y EI+TP +L +
Sbjct: 240 RDHRKLGKELGLFTLMDEGPGFPFFLPKGMILKNLLIDYWRKIHERERYVEISTPMMLSR 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHWD Y+ NM+  K       D   FA+KPMNCPG + V+     SYRELP+R+
Sbjct: 300 KLWETSGHWDHYKDNMYTTKI------DEEDFAIKPMNCPGGLLVYKSVPHSYRELPIRM 353

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            E G V+R+E SG+LHGLMRVR FTQDDAH++ T+EQ+ +E   +  LI  +Y  FGF K
Sbjct: 354 GELGLVHRHEKSGALHGLMRVRCFTQDDAHIYMTQEQITDEIKGVVRLIDEVYSKFGF-K 412

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LST+PE  +GS+A W+ A   ++  LD ++      +N  V  G+GAFYGPK ++ 
Sbjct: 413 YHVELSTKPENSIGSEADWEIATCGLRKALDELQ------MNYVVNEGDGAFYGPKIDFH 466

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+D+IGR WQCGTIQ+DF LP RF A Y+ +  EK  P+MIHR VFGSIERFIGI+IE+F
Sbjct: 467 LEDSIGRTWQCGTIQLDFQLPQRFEAEYIGADGEKHRPIMIHRVVFGSIERFIGILIEHF 526

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P+WL+P+Q  +  I+     Y++E+   LK   +  E D R+E I YKIRE  ++K
Sbjct: 527 AGKFPVWLAPVQIKILPISEKFSTYSKEVLMKLKKADIRCEMDERDEKIGYKIREAQLEK 586

Query: 603 IPIIIICGDKEASERSIGIR 622
           +P ++I G+KEA    + +R
Sbjct: 587 VPYMLILGEKEAETGMLSVR 606


>gi|315646839|ref|ZP_07899954.1| threonyl-tRNA synthetase [Paenibacillus vortex V453]
 gi|315277769|gb|EFU41093.1| threonyl-tRNA synthetase [Paenibacillus vortex V453]
          Length = 635

 Score =  552 bits (1422), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 277/644 (43%), Positives = 420/644 (65%), Gaps = 20/644 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLS-DPVREGSIEIIT 63
           I +T  DGS K +P   T   +AESI   L K AVA  +NG++ DL+ +   +  + I+T
Sbjct: 3   ITVTLADGSKKEYPAQTTMKQIAESIHSGLRKSAVAGKVNGRLVDLNYELCEDAEVRIVT 62

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPE--VQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
            +    L + RHS AH+MA+AV+ ++    V + +GP++EDGFYYD D E   S+D+L  
Sbjct: 63  LDSEDGLNIYRHSTAHLMAQAVKRLYGSKPVYLGVGPVVEDGFYYDMDLEHSISTDDLIA 122

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE++MQ+I+  D P +++ +S E+A +LF    + YK E++  +P +E +++Y QGE+ D
Sbjct: 123 IEREMQQIVQEDLPIIRREISREEAEQLFSD--DPYKRELILGLPEEEIISVYEQGEFID 180

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ STG++K F KLM VAGAYWRG+S+  ML RIYGTA+  Q +L ++L+ LEE+
Sbjct: 181 LCRGPHLPSTGRIKAF-KLMSVAGAYWRGNSDHKMLQRIYGTAFPKQAQLEEHLFLLEEA 239

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           +KRDHRKL +E+ LF  ++D  G+ F+  KG  I   L  + R  +    Y+E+ TP ++
Sbjct: 240 KKRDHRKLGKELGLFMFSDDAPGMPFFLPKGTIIRNELEQFARELQFHRGYDEVRTPLMM 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ LW+ SGHWD Y+ NM+  K       D + + +KPMNCPGH+ V+ + L SYRELP+
Sbjct: 300 NKRLWEMSGHWDHYKDNMYFSKV------DEQEYVMKPMNCPGHMLVYQNSLHSYRELPI 353

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RL+EFG V+R+E SG+L G+MRVR F QDDAH+F   +Q+ +E  ++ + I  +Y+ FGF
Sbjct: 354 RLSEFGQVHRHEYSGALSGMMRVRTFCQDDAHIFVRPDQIHDEIGQVIDFISQVYRVFGF 413

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           +   ++LSTRPE  +GSD LW+ AE+ ++ VLD  K     RIN G    +GAFYGPK +
Sbjct: 414 D-YTIELSTRPEDSMGSDELWEQAESSLQEVLDQQKLPY--RINEG----DGAFYGPKID 466

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           + + D++ R WQCGTIQ+DF  P +F+  Y+   ++K  PV+IHRAVFGSIERFIGI+ E
Sbjct: 467 FHILDSLKRSWQCGTIQLDFQFPEKFDLSYIAEDNQKHRPVVIHRAVFGSIERFIGILTE 526

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           ++ G  PLWL+P+  ++  ++   ++++ ++   L+   + +E D RNE + YKIRE  +
Sbjct: 527 HYGGAFPLWLAPVHVMLIPVSDHYIDFSLKVKKRLEHAGVRVEVDIRNEKLGYKIREAGL 586

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            K P   + G+KE +   + +R+ G     + ++ D I  L KE
Sbjct: 587 LKTPYTFVLGEKEMNSDLVAVRKRGEGELGESAIDDMIARLRKE 630


>gi|260424668|ref|ZP_05732876.2| threonine--tRNA ligase [Dialister invisus DSM 15470]
 gi|260402758|gb|EEW96305.1| threonine--tRNA ligase [Dialister invisus DSM 15470]
          Length = 647

 Score =  552 bits (1422), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 269/620 (43%), Positives = 399/620 (64%), Gaps = 16/620 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           I +   DG   +F    T  + A+ IS SLAK  +   ++G++ D+ + + +G+ +E  T
Sbjct: 14  ITIRLKDGKELHFENEVTLFEAAKKISNSLAKDVLVAKVDGELTDIRNNITDGTQVEFFT 73

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
             D   L  +RH+ AH+MA+A+Q ++P  + AIGP I+DGFYYD + +  FS ++ A IE
Sbjct: 74  KADKEGLFTLRHTAAHVMAQAIQHLYPGTKFAIGPAIDDGFYYDLESDHVFSQEDFAAIE 133

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M +I   + P  K+ LS  +A E F SK + YKV +++ +P    ++ Y QG++ DLC
Sbjct: 134 KEMAKIAKANLPIEKKILSRNEALEFFRSKNQDYKVILIQDLPEDAIISTYTQGDFTDLC 193

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHVRSTG++K  FKLM VAGAYWRGD +  ML RIY TA+  ++EL ++L+   E+EK
Sbjct: 194 RGPHVRSTGKLK-VFKLMAVAGAYWRGDEHNKMLQRIYATAFFDKEELDRFLFVRAEAEK 252

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL ++++LF   E+G G  F+H KG  I   LI+Y R   ++  YEEI TP +L +
Sbjct: 253 RDHRKLGKQLNLFSFHEEGPGFPFFHPKGMVIRNELIAYERELFREFGYEEIMTPIILSK 312

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW QSGHWD Y+ NM+  +       D   +A+KPMNCPG +  +     SYRELP R+
Sbjct: 313 KLWLQSGHWDHYKENMYFTQI------DEEDYAVKPMNCPGGILYYKTNQHSYRELPKRV 366

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG V+R+E  G+LHGL RVR FTQDDAH+F T++QM +E +K   +   +Y  FG E 
Sbjct: 367 GEFGIVHRHELHGALHGLFRVRVFTQDDAHIFMTQDQMKDEVIKTMEMYRKLYSVFGLE- 425

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +GS+ LW+ + N ++   D ++ +    +   +  G+GAFYGPK ++ 
Sbjct: 426 YHVELSTRPENSMGSEELWEISTNALR---DAVEAAGVPYV---INEGDGAFYGPKLDFH 479

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KD +GR WQCGTIQ+D  LP RF+  YV    EK   VM+HRA +GS+ERFIGI+IE+F
Sbjct: 480 IKDCLGRTWQCGTIQMDMQLPERFDVNYVGEDGEKHRAVMLHRAGYGSLERFIGILIEHF 539

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P W++P+Q  V  +T   + YA+ +A+ L + ++ +E +  N+T+ YKIR+  ++K
Sbjct: 540 AGAFPSWIAPVQVKVVPVTEKHMNYARSVADALSASNVRVEIEEGNDTLGYKIRKAQMEK 599

Query: 603 IPIIIICGDKEASERSIGIR 622
           +P  ++ GDKE +  ++ +R
Sbjct: 600 VPYTLVVGDKEMNGHTVSVR 619


>gi|85858497|ref|YP_460699.1| threonyl-tRNA synthetase [Syntrophus aciditrophicus SB]
 gi|85721588|gb|ABC76531.1| threonyl-tRNA synthetase [Syntrophus aciditrophicus SB]
          Length = 645

 Score =  551 bits (1421), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 276/647 (42%), Positives = 414/647 (63%), Gaps = 20/647 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEII 62
           +IK+  PDGS ++     T  DV  S + +L     A   N  + DLS  + + G +E I
Sbjct: 10  EIKIVLPDGSERSHNEGVTVRDVLSSWNPALLATTAAARYNQNLLDLSRSLHDDGVLEPI 69

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
                  L ++RHS +HIMA+AVQ I+P V V+IGP IEDGFYYDF+    F+ +EL +I
Sbjct: 70  DIHSREGLEILRHSISHIMAQAVQDIFPGVLVSIGPAIEDGFYYDFEYGNTFTPEELEKI 129

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-ENVTLYRQGEWFD 181
           E +MQEI+  D PF+++ +S E+A   F+ K E+YKVE+L  +P   + V+LYRQG + D
Sbjct: 130 EARMQEIVKEDHPFVREEVSREEAVAFFQGKGESYKVELLNDLPGNIKTVSLYRQGHYTD 189

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV ST  ++ F KL+ VAGAYWRGD    ML RIYGT + +++EL +YL  LEE+
Sbjct: 190 LCRGPHVPSTSMIRAF-KLLNVAGAYWRGDERNKMLQRIYGTGFASREELDEYLKILEEA 248

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK--IKDDYEEINTPQ 298
           +KRDHRKL +++DLF ++E+ G+G+I +H KG  I +T+I    +K  ++  Y+ +  PQ
Sbjct: 249 KKRDHRKLGKDLDLFQVSEEAGAGLIIFHPKG-TILRTIIEDWEKKEHLRRGYDMVMGPQ 307

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L   LW++SGH+D YR NM+  +         +++ +KPMNC  H+ ++   ++SYR+L
Sbjct: 308 ILKVDLWKKSGHFDHYRENMYFTEVEG------QSYGIKPMNCLSHMLIYKTKIRSYRDL 361

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R  E G+V+R+E +G LHGL+R R FTQDDAH+ CT EQ+ +E   I + +    K F
Sbjct: 362 PIRYFELGTVHRHEKTGVLHGLLRARQFTQDDAHILCTPEQLNSEIRAIADFVGYAMKIF 421

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE   V+LSTRP+  +GSD  W+ A + ++  L        +++   +  G+GAFYGPK
Sbjct: 422 GFE-YEVELSTRPDNSIGSDQDWELATSALENAL------KDNQMTYDINEGDGAFYGPK 474

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++ LKDA+ R WQC TIQ DF LP RF+  YV +  EK  PVM+HR + G+IERF+G++
Sbjct: 475 IDFKLKDALKRKWQCATIQCDFTLPERFDLTYVGADGEKHRPVMLHRVILGAIERFMGVL 534

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE++ G  P+WL+P+QAI+ ++T   + Y + +   L    + +E DFRNE + YKIRE 
Sbjct: 535 IEHYGGAFPVWLAPVQAILLSVTDRHIPYGKTVYQQLMDAGIRVEGDFRNEKLGYKIREA 594

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
             +KIP +++ GDKE +   + +R+ G      + +   I ++ ++S
Sbjct: 595 QTQKIPYMLVIGDKEMASGEVAVRQRGGDNLGTLPVSAFIELVKEKS 641


>gi|291531005|emb|CBK96590.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Eubacterium
           siraeum 70/3]
          Length = 639

 Score =  551 bits (1421), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 285/634 (44%), Positives = 402/634 (63%), Gaps = 19/634 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           IK+T  DGS+K      +  DVA+ IS  LAK A    I+G++ DL   +  + ++EI+T
Sbjct: 2   IKVTLKDGSVKELESACSVFDVAKEISSRLAKAACVAKIDGEIKDLRTVIDSDCTLEILT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D       RH+ +HI+A+AV+ ++PEV++AIGP I++GFYYDFDK+ PF  ++L  IE
Sbjct: 62  FDDEDGKKAFRHTASHILAQAVKRLYPEVKLAIGPAIDNGFYYDFDKDTPFMPEDLEAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-ENVTLYRQGEWFDL 182
            +M++I+  D    +  ++   A +  +   E YKVE+ E    K E ++ Y+QGE+ DL
Sbjct: 122 AEMKKIVKEDLKLEQFEMAPADAIKYLKEIDEPYKVELCEEHAGKNEPISFYKQGEFTDL 181

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPH+ STG VK F KL    GAYWRG     MLSRIY TA+    EL  YL  +EE++
Sbjct: 182 CAGPHLMSTGYVKAF-KLTSCTGAYWRGSEKNKMLSRIYATAFPKASELEAYLNMIEEAK 240

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KRDHRKL +E++LF I ++G G  F+  KG  +  TLI Y R+   +D Y EI+TP +L+
Sbjct: 241 KRDHRKLGKELELFTIMDEGPGFPFFLPKGMTLKNTLIDYWRQIHTRDGYVEISTPIMLN 300

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHWD Y+ NM+       T+ D   FA+KPMNCPG + V+    +SYR+LP+R
Sbjct: 301 RQLWETSGHWDHYKENMYT------TVIDGTEFAIKPMNCPGGILVYKSKPRSYRDLPIR 354

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           + E G V+R+E SG+LHGLMRVR FTQDDAH+F T +Q+ +E   +  LI  +YK FGF 
Sbjct: 355 MGELGLVHRHEKSGALHGLMRVRCFTQDDAHIFMTPDQITDEIKGVVRLIDEVYKLFGF- 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
           K  V+LST+PE  +GS   WD A   ++  LD++       +   V  G+GAFYGPK ++
Sbjct: 414 KYHVELSTQPEDSMGSQEDWDMATEGLRKALDSLG------LPYVVNEGDGAFYGPKIDF 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L+D++GR WQCGTIQ+DF LP RF   Y  +  EK  P+MIHR VFGSIERFIGI+ E+
Sbjct: 468 HLEDSLGRTWQCGTIQLDFQLPMRFELEYTGADGEKHRPIMIHRVVFGSIERFIGILTEH 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           F G  P+WL+P+Q  +  I     E+  ++A  LK   + +E D R+E I +KIRE  ++
Sbjct: 528 FAGAFPIWLAPVQVELMPIADRHNEFTSKVAAELKKRGIRVEVDGRSEKIGFKIREAQLQ 587

Query: 602 KIPIIIICGDKEASERSIGI--RRFGSTTTQKVS 633
           KIP +++ GDKE    ++ I  R+ G   T  VS
Sbjct: 588 KIPYMLVIGDKEVETENVSIRCRKRGDIGTMSVS 621


>gi|291557532|emb|CBL34649.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Eubacterium
           siraeum V10Sc8a]
          Length = 639

 Score =  551 bits (1421), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 285/643 (44%), Positives = 405/643 (62%), Gaps = 17/643 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           IK+T  DGS+K      +  DVA+ IS  LAK A    I+G++ DL   +  + ++EI+T
Sbjct: 2   IKVTLKDGSVKELESACSVFDVAKEISSRLAKAACVAKIDGEIKDLRTVIDSDCTLEILT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D       RH+ +HI+A+AV+ ++PEV++AIGP I++GFYYDFDK+ PF  ++L  IE
Sbjct: 62  FDDEDGKKAFRHTASHILAQAVKRLYPEVKLAIGPAIDNGFYYDFDKDTPFMPEDLEAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-ENVTLYRQGEWFDL 182
            +M++I+  D    +  ++   A +  +   E YKVE+ E    K E ++ Y+QGE+ DL
Sbjct: 122 AEMKKIVKEDLKLEQFEMAPADAIKYLKEIDEPYKVELCEEHAGKNEPISFYKQGEFTDL 181

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPH+ STG VK F KL    GAYWRG     MLSRIY TA+    EL  YL  +EE++
Sbjct: 182 CAGPHLMSTGYVKAF-KLTSCTGAYWRGSEKNKMLSRIYATAFPKASELEAYLNMIEEAK 240

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KRDHRKL +E++LF I ++G G  F+  KG  +  TLI Y R+   +D Y EI+TP +L+
Sbjct: 241 KRDHRKLGKELELFTIMDEGPGFPFFLPKGMTLKNTLIDYWRQIHTRDGYVEISTPIMLN 300

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHWD Y+ NM+       T+ D   FA+KPMNCPG + V+    +SYR+LP+R
Sbjct: 301 RQLWETSGHWDHYKENMYT------TVIDDTEFAIKPMNCPGGILVYKSKPRSYRDLPIR 354

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           + E G V+R+E SG+LHGLMRVR FTQDDAH+F T +Q+ +E   +  LI  +YK FGF 
Sbjct: 355 MGELGLVHRHEKSGALHGLMRVRCFTQDDAHIFMTPDQITDEIKGVVRLIDEVYKLFGF- 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
           K  V+LST+PE  +GS   WD A   ++  LD++       +   V  G+GAFYGPK ++
Sbjct: 414 KYHVELSTQPEDSMGSQEDWDMATEGLRKALDSLG------LPYVVNEGDGAFYGPKIDF 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L+D++GR WQCGTIQ+DF LP RF   Y  +  EK  P+MIHR VFGSIERFIGI+ E+
Sbjct: 468 HLEDSLGRTWQCGTIQLDFQLPMRFELEYTGADGEKHRPIMIHRVVFGSIERFIGILTEH 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           F G  P+WL+P+Q  +  I     E+  ++A  LK   + +E D R+E I +KIRE  ++
Sbjct: 528 FAGAFPIWLAPVQVELMPIADRHNEFTSKVAAELKKRGIRVEVDGRSEKIGFKIREAQLQ 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIP +++ GDKE    ++ IR         +S+ D   ++ KE
Sbjct: 588 KIPYMLVIGDKEVETENVSIRCRKRGDIGTMSVADFCDMVEKE 630


>gi|313888403|ref|ZP_07822071.1| threonine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
 gi|312845600|gb|EFR32993.1| threonine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
          Length = 636

 Score =  551 bits (1420), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 271/640 (42%), Positives = 404/640 (63%), Gaps = 16/640 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPE 65
           + +PDGS K +      S +   IS  L ++++   +NG++  L D V E    +++  E
Sbjct: 3   IKYPDGSQKEYESGVKVSQITGDISEGLLRQSLGAVVNGEILGLDDKVYEDADFKVVKFE 62

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D     +  H+ +HIMA A+Q ++P+ + AIGP  E GFYYD D E  F  ++   IE K
Sbjct: 63  DKEGKQIFWHTASHIMAYAIQELYPDTKFAIGPSTETGFYYDLDLEHRFVEEDFKAIEDK 122

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+EI  +D P  +  +S E+A + F+ K + YKVE++  +PA E +T+Y+ G++ DLC+G
Sbjct: 123 MKEIAKKDLPVERIEISREEALKYFKEKGQDYKVELINDLPADEKITMYKIGDFLDLCKG 182

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PH+ ST ++K   KL+ +AGAYWRGDSN  ML R+YG A+  Q +L +Y+   EE+EKRD
Sbjct: 183 PHLLSTKKIKAI-KLLSIAGAYWRGDSNNKMLQRLYGIAFEKQSQLEEYITRREEAEKRD 241

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHL 304
           HRKL +E+DLF + E+G G  F+H  G  +   L+++ R  + ++ Y EI TP +L++ L
Sbjct: 242 HRKLGKELDLFSMHEEGPGFPFFHPNGMILRNNLLNWWRGVLDENGYGEILTPIILNEAL 301

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W +SGHWD Y+ NM+  K  D        +A+KPMNCPG + V+N    SYR+LP+RLAE
Sbjct: 302 WHRSGHWDHYKDNMYFTKIDDGD------YAVKPMNCPGSILVYNSNKHSYRDLPIRLAE 355

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           +G V+R+E SG+LHGL RVR FTQDDAHV+C   Q+ +E  K+ +L   +Y  FGF K  
Sbjct: 356 YGIVHRHELSGALHGLFRVRTFTQDDAHVYCLFSQVKDEVFKMIDLADYLYSTFGF-KYS 414

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           ++LSTRP+  +G    W+ AE  +K  L+      +  +   +  G+GAFYGPK ++ L+
Sbjct: 415 IELSTRPDDYMGELEAWNLAEKSLKEALE------EKNLPYTINEGDGAFYGPKIDFHLE 468

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           DAIGR WQCGTIQ+DF LP  F+  YV+ + E+  PVM+HRA+ GS+ERF+GI+IE+F G
Sbjct: 469 DAIGRTWQCGTIQLDFQLPENFDLTYVDENGERQRPVMLHRALLGSVERFMGILIEHFAG 528

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             PLWLSP+Q  V  ++    ++A+ IA+ L +  L +  D R E + YKIRE  +KKI 
Sbjct: 529 KFPLWLSPVQVEVIPVSDKFKDFAESIADKLHAAGLRVHLDGRAEKVGYKIREAQVKKIN 588

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            +++ G+KE +   + +R+      Q V + + I  L +E
Sbjct: 589 YMLVIGEKEETSGKLSVRKRNGEEVQDVDVDEFIASLKEE 628


>gi|167749880|ref|ZP_02422007.1| hypothetical protein EUBSIR_00848 [Eubacterium siraeum DSM 15702]
 gi|167657192|gb|EDS01322.1| hypothetical protein EUBSIR_00848 [Eubacterium siraeum DSM 15702]
          Length = 639

 Score =  551 bits (1419), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 285/634 (44%), Positives = 402/634 (63%), Gaps = 19/634 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           IK+T  DGS+K      +  DVA+ IS  LAK A    I+G++ DL   +  + ++EI+T
Sbjct: 2   IKVTLKDGSVKELESACSVFDVAKEISPRLAKAACVAKIDGEIKDLRTVIDSDCTLEILT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D       RH+ +HI+A+AV+ ++PEV++AIGP I++GFYYDFDK+ PF  ++L  IE
Sbjct: 62  FDDEDGKKAFRHTASHILAQAVKRLYPEVKLAIGPAIDNGFYYDFDKDTPFMPEDLEAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-ENVTLYRQGEWFDL 182
            +M++I+  D    +  ++   A +  +   E YKVE+ E    K E ++ Y+QGE+ DL
Sbjct: 122 AEMKKIVKEDLKLEQFEMAPADAIKYLKEIDEPYKVELCEEHAGKNEPISFYKQGEFTDL 181

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPH+ STG VK F KL    GAYWRG     MLSRIY TA+    EL  YL  +EE++
Sbjct: 182 CAGPHLMSTGYVKAF-KLTSCTGAYWRGSEKNKMLSRIYATAFPKASELEAYLNMIEEAK 240

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KRDHRKL +E++LF I ++G G  F+  KG  +  TLI Y R+   +D Y EI+TP +L+
Sbjct: 241 KRDHRKLGKELELFTIMDEGPGFPFFLPKGMTLKNTLIDYWRQIHTRDGYVEISTPIMLN 300

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHWD Y+ NM+       T+ D   FA+KPMNCPG + V+    +SYR+LP+R
Sbjct: 301 RQLWETSGHWDHYKENMYT------TVIDDTEFAIKPMNCPGGILVYKSKPRSYRDLPIR 354

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           + E G V+R+E SG+LHGLMRVR FTQDDAH+F T +Q+ +E   +  LI  +YK FGF 
Sbjct: 355 MGELGLVHRHEKSGALHGLMRVRCFTQDDAHIFMTPDQITDEIKGVVRLIDEVYKLFGF- 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
           K  V+LST+PE  +GS   WD A   ++  LD++       +   V  G+GAFYGPK ++
Sbjct: 414 KYHVELSTQPEDSMGSQEDWDMATEGLRKALDSLG------LPYVVNEGDGAFYGPKIDF 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L+D++GR WQCGTIQ+DF LP RF   Y  +  EK  P+MIHR VFGSIERFIGI+ E+
Sbjct: 468 HLEDSLGRTWQCGTIQLDFQLPMRFELEYTGADGEKHRPIMIHRVVFGSIERFIGILTEH 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           F G  P+WL+P+Q  +  I     E+  ++A  LK   + +E D R+E I +KIRE  ++
Sbjct: 528 FAGAFPIWLAPVQVELMPIADRHNEFTSKVAAELKKRGIRVEVDGRSEKIGFKIREAQLQ 587

Query: 602 KIPIIIICGDKEASERSIGI--RRFGSTTTQKVS 633
           KIP +++ GDKE    ++ I  R+ G   T  VS
Sbjct: 588 KIPYMLVIGDKEVETENVSIRCRKRGDIGTMSVS 621


>gi|302342263|ref|YP_003806792.1| threonyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
 gi|301638876|gb|ADK84198.1| threonyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
          Length = 627

 Score =  550 bits (1418), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 271/628 (43%), Positives = 404/628 (64%), Gaps = 21/628 (3%)

Query: 26  VAESISRS---LAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIM 81
           VAE I+R+    A++A+A  ++G++ DLS  V  +     I P +  +L ++RHS AHIM
Sbjct: 8   VAELIARADPKAARQALAAEVDGRLVDLSAEVSADAQARPILPGEAAALDLLRHSTAHIM 67

Query: 82  AEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYL 141
           AEAV++++P V+V IGP IE+GFYYDF  E+ F+ D+L  IE KM++II  ++PF++   
Sbjct: 68  AEAVRALFPGVKVGIGPAIENGFYYDFAYERAFAMDDLPAIEDKMRQIIKANTPFVRCEA 127

Query: 142 SHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLM 201
             E+ R LF  + E +KVE+++ +   + V+ Y QG + DLCRGPH+ STG+V  F KL+
Sbjct: 128 PREEIRRLFADQGEQFKVELIDDL-HDQVVSTYGQGSFVDLCRGPHIPSTGRVGAF-KLL 185

Query: 202 KVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED 261
            VAGAYWRGD  RPMLSRIYGTA+  + EL QYL+ LEE++KRDHRKL +E+DLF   E+
Sbjct: 186 SVAGAYWRGDEKRPMLSRIYGTAFFDKNELKQYLHMLEEAKKRDHRKLGKELDLFSFHEE 245

Query: 262 -GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMF 319
            G G++ WH +G  +   L  + RR+ ++  Y+ +  PQ+L + LW++SGH+D+YR NM+
Sbjct: 246 IGPGMVVWHNRGMMLRMVLEDFERREHLRRGYQIVQGPQLLKRELWERSGHYDNYRENMY 305

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHG 379
             +       D   + +KPMNC  H+ ++   + SYR+LP+R+ E G+V+R+E SG L G
Sbjct: 306 FTEV------DGTAYGVKPMNCLAHMLIYKSKMHSYRDLPIRMFELGTVHRHEKSGVLGG 359

Query: 380 LMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDA 439
           L RVR FTQDDAH+ C  +Q+  E + + + +  +   FGF+  M +LSTRP+K +GSD 
Sbjct: 360 LTRVRAFTQDDAHILCRPDQLEGEIMGVMDFVGEVMAIFGFDYGM-ELSTRPDKSIGSDE 418

Query: 440 LWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVD 499
            W+ A N ++  L+      +  IN G    +GAFYGPK ++ LKDA+GR WQC TIQ D
Sbjct: 419 DWERATNALRKALEASGRPYE--INEG----DGAFYGPKIDFKLKDALGRQWQCATIQCD 472

Query: 500 FNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTT 559
           F LP RF+  Y+     +  PVMIHR + GS+ERFIG++IE++ G  P WL+P QA V T
Sbjct: 473 FTLPERFDLTYIAPDDSRQRPVMIHRVILGSLERFIGVLIEHYAGRFPFWLAPEQARVLT 532

Query: 560 ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSI 619
           +T  A ++A+E+   LK+    +E D RNE +  K+RE  + K+P +++ GD+E  ER +
Sbjct: 533 VTERADDWAREVFAALKNAGYRVEMDLRNEKLGAKVREAQLLKVPYMLVIGDREVDERQV 592

Query: 620 GIRRFGSTTTQKVSLLDAIPILTKESLP 647
             R         + L   + +  +++ P
Sbjct: 593 APRLRSGKNLPPLDLAGLLALFAEQARP 620


>gi|188586439|ref|YP_001917984.1| Ser-tRNA(Thr) hydrolase, threonyl-tRNA synthetase [Natranaerobius
           thermophilus JW/NM-WN-LF]
 gi|229558041|sp|B2A5P2|SYT_NATTJ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|179351126|gb|ACB85396.1| Ser-tRNA(Thr) hydrolase, threonyl-tRNA synthetase [Natranaerobius
           thermophilus JW/NM-WN-LF]
          Length = 636

 Score =  550 bits (1418), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 278/642 (43%), Positives = 417/642 (64%), Gaps = 19/642 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           +K+T  DGS+K     +   D+A+SIS  LAK+AV   ++GK   L+  + E   +EI++
Sbjct: 2   LKITLKDGSVKEIEKGSNVLDLAKSISNRLAKEAVGAKVDGKTVGLNKELNENCEVEILS 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            ED     + RH+ +HI+A AV+ ++  V++ IGP I+DGFYYDFD E   S  +L  I+
Sbjct: 62  FEDDEGCDIYRHTSSHILAHAVKRLYDNVKLGIGPPIKDGFYYDFDLEHSLSDKDLEDIK 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M++II  D P  ++    ++A E+F+   E YK+E+++ +   E +  Y+QG++ DLC
Sbjct: 122 KEMKKIIKEDLPIERKVYKRDEAIEMFKEMGEDYKIELIQDLGEDEEICCYQQGDFIDLC 181

Query: 184 RGPHVRSTGQVKKF-FKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           +GPH+ STG++K     L+KVAGAYWRGD NR ML RIYGT++  + +L +Y+  LEE++
Sbjct: 182 QGPHLPSTGKIKDTALDLLKVAGAYWRGDENRAMLQRIYGTSFIKKSQLEEYIQRLEEAK 241

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLD 301
           KR+HRKL +E+DLF   E+  G  F+H  G  +   LI + RR+  K  Y+EI+TP +L+
Sbjct: 242 KREHRKLGKELDLFSFHEEAPGSPFFHNNGMIVINELIDFWRREHRKAGYQEISTPIILN 301

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW++SGHWD ++ NM+  +  D+       FA+KPMNCPG + V+N+ + SYR+ P+R
Sbjct: 302 RGLWERSGHWDHFQENMYFTEIDDED------FAVKPMNCPGAMLVYNNNMYSYRDFPLR 355

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AE G V+R+E SG+LHGL+R R FTQDDAH+F    Q+  E   + NL+   Y  FGF 
Sbjct: 356 VAELGKVHRHELSGALHGLLRARSFTQDDAHIFMLPSQVEEELENVINLVDRFYSVFGF- 414

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LST+PEK +GSD +WD A N +K VL+      +  I   V  G+GAFYGPK ++
Sbjct: 415 NYYVELSTKPEKAMGSDEIWDRAINALKSVLE------KRGIKYIVNEGDGAFYGPKIDF 468

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L+DAIGR WQC TIQ+DF LP RF+  Y+    +K  PVMIHR ++G+IERF  ++IE+
Sbjct: 469 QLEDAIGRSWQCSTIQLDFLLPERFDLTYIGEDGQKHRPVMIHRVIYGAIERFFALLIEH 528

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           ++G  PLWL+P QA++  I    +EY ++I   L+S  +  + D RNE I YKIR+  +K
Sbjct: 529 YEGKFPLWLAPRQAVIIPIADRHMEYGKDITKQLESEGIRADLDQRNEKIGYKIRDAQLK 588

Query: 602 KIPIIIICGDKEASERSIGI--RRFGSTTTQKVS-LLDAIPI 640
           K+P ++I GD E   +++ +  R  G   ++ V+ L+D I +
Sbjct: 589 KVPYMLIVGDDEVENKTVSVRTREDGDIGSKSVAELVDEIKV 630


>gi|328953980|ref|YP_004371314.1| threonyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
 gi|328454304|gb|AEB10133.1| threonyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
          Length = 640

 Score =  550 bits (1418), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 270/653 (41%), Positives = 417/653 (63%), Gaps = 18/653 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           S I++   DG         +     + +  +     VA  +NG++ DL+  ++ + ++  
Sbjct: 2   SVIRVQLLDGDSHQVEAGLSVGKALQLLGVARDHNVVAARVNGELVDLNSLLQIDSTVVP 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +  +DP  L ++RHS AHIMAEAV+S++P V++ IGP IE+GFYYDFD  +PF++++L +
Sbjct: 62  VAKDDPEGLQILRHSAAHIMAEAVRSLFPGVKITIGPAIENGFYYDFDPPRPFTTEDLGR 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE +M  ++ +D PF+++ +S ++A + F+++ E YKVE+L+ +   + V+LY+QG + D
Sbjct: 122 IEARMWNLVEQDLPFIRREVSWQEALDYFQAQGETYKVELLQDL-KDQQVSLYQQGGFVD 180

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ S+G +  F KL  VAGAYWRGD   PML RIYG A+ T  EL Q+L+FLEE+
Sbjct: 181 LCRGPHIPSSGYLSAF-KLTSVAGAYWRGDERNPMLQRIYGAAFATGAELDQHLHFLEEA 239

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQV 299
           ++RDHR+L RE+ LF I E+ G G++ +H KG ++   L  + RR+ ++  Y+ +  P +
Sbjct: 240 KRRDHRRLGRELGLFSIEEEAGPGLVIYHPKGARLRLVLEDFERREHLRRGYQIVMGPTL 299

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           L   LW++SGH+++YR NM+  +     I+ +  + +KPMNC  H+ ++   ++SYRELP
Sbjct: 300 LKLDLWKRSGHFENYRENMYFTE-----IEGI-DYGIKPMNCLAHMLIYKSSIRSYRELP 353

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +RL E G+V+R+E SG LHGL RVR FTQDDAH+ C  +Q+  E   + + +  +   FG
Sbjct: 354 LRLFELGTVHRHERSGVLHGLTRVRQFTQDDAHILCRPDQVETEIAGVIDFVAEVMAVFG 413

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           FE   V+LSTRPEK +GSD  W+ A + +   L T +N     +      GEGAFYGPK 
Sbjct: 414 FE-YEVELSTRPEKSIGSDEDWERATSALINALQT-RN-----LPFATCEGEGAFYGPKI 466

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +  LKDAI R WQC T+Q DF LP RF+  Y+        PVM+HR + GS+ERF+G++I
Sbjct: 467 DIKLKDAINRRWQCATVQCDFTLPERFDLTYIGPDGNPHRPVMLHRVILGSLERFLGVLI 526

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E++ G  P+WL+P+QAI+  +T  A  +A ++A  L++  L +ETD RNE +  KIRE  
Sbjct: 527 EHYAGAFPVWLAPVQAIILPVTDRAHPFALDVARRLQAEELRVETDLRNEKLGLKIREAQ 586

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           ++KIP +II GD+E + +++ +RR   T  +     + + +L  E  PP   K
Sbjct: 587 LQKIPYMIIIGDREVAAQTLSVRRLDGTEIKDTPWEEFVRLLKTEGQPPRLGK 639


>gi|261406470|ref|YP_003242711.1| threonyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
 gi|261282933|gb|ACX64904.1| threonyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
          Length = 636

 Score =  550 bits (1416), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 275/644 (42%), Positives = 416/644 (64%), Gaps = 20/644 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           I +T  DGS K +P   T   +AESI   L K AVA   +GK+ DL+  +RE   + IIT
Sbjct: 3   IVVTLQDGSKKEYPAQTTMFQIAESIHSGLKKNAVAAKADGKLVDLNQELREDAEVSIIT 62

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIW--PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
            +    L V RHS AH+MA+AV+ ++    V + +GP+IEDGFYYD D     ++D+L  
Sbjct: 63  LDSEDGLYVYRHSTAHLMAQAVKRLYGSESVHLGVGPVIEDGFYYDMDLGHSITADDLIT 122

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE++MQ+I+  D P L++ +  ++A  +F+   + YK+E++  +P  E +++Y QGE+ D
Sbjct: 123 IEREMQKIVQEDLPILRKEVGRKEAERIFQD--DPYKMELIRELPEDEVISVYEQGEFVD 180

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ STG++K F KLM VAGAYWRGDS+  ML RIYGTA+  + +L ++L  LEE+
Sbjct: 181 LCRGPHLPSTGRIKAF-KLMSVAGAYWRGDSDNKMLQRIYGTAFPKKSQLDEHLLLLEEA 239

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           +KRDHRKL +E+ LF  +E+  G+ F+   G  I   L  + R  +   DY+E+ TP ++
Sbjct: 240 KKRDHRKLGKELGLFMFSEEAPGMPFFLPNGMIIRNELEQFARGLQFHRDYDEVRTPLMM 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ LW+ SGHWD Y+ NM+  +       D   +ALKPMNCPGH+ V+ + L SYRELP+
Sbjct: 300 NKRLWEMSGHWDHYKDNMYFTQV------DETEYALKPMNCPGHMLVYKNSLHSYRELPI 353

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R++EFG V+R+E SG+L+G+MRVR F QDDAH+F   +Q+  E  ++ + I  +Y+ FGF
Sbjct: 354 RISEFGQVHRHEFSGALNGMMRVRTFCQDDAHIFVRPDQIQEEIKQVIDFISRVYQVFGF 413

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           E   ++LSTRPE  +GS+ LW+ AE  ++ VLD +      RIN G    +GAFYGPK +
Sbjct: 414 E-YTIELSTRPEDSMGSEELWEQAETSLQQVLDQLGLPY--RINEG----DGAFYGPKID 466

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           + + D++ R WQCGTIQ+DF  P +F+  Y+   ++K  PV+IHRAVFGSIERFIGI+ E
Sbjct: 467 FHILDSLKRSWQCGTIQLDFQFPEKFDLSYIGEDNQKHRPVVIHRAVFGSIERFIGILTE 526

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           ++ G  P+WL+P+Q ++  ++   ++Y+ ++   L++  + +  D RNE + YKIRE  +
Sbjct: 527 HYGGAFPMWLAPVQVMIIPVSDHYIDYSLKVKKRLENAGIRVNVDVRNEKLGYKIREAGL 586

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            K P  ++ G+KE     + +R+ G     ++++   I  L  E
Sbjct: 587 LKTPYTLVLGEKEMDSDHVSVRKRGEGELGEIAIDQVIERLRNE 630


>gi|115375454|ref|ZP_01462714.1| threonyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|115367497|gb|EAU66472.1| threonyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
          Length = 616

 Score =  550 bits (1416), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 275/625 (44%), Positives = 396/625 (63%), Gaps = 15/625 (2%)

Query: 28  ESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPEDPRSLAVIRHSCAHIMAEAVQ 86
           E I   LAK A+   +NG+  DL+ P+ E   ++I T +   +L +IRH  AH++A AVQ
Sbjct: 3   EGIGAGLAKAALFARVNGQDMDLARPLTEDAKLQIFTTKSTEALELIRHDAAHLVASAVQ 62

Query: 87  SIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKA 146
            ++P  QV IGP  E+GFYYDF +E+PF+ ++L +IE +    IAR+ PF+++ +S E+A
Sbjct: 63  RLFPGTQVTIGPATEEGFYYDFFREKPFTPEDLEKIEAEANAEIARNLPFVRKEVSMEEA 122

Query: 147 RELFESKKEAYKVEILESIPAK--ENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVA 204
             LFE K E +KVEI++ I AK  + +TLY  G+W D C GPH  STG+V    K++  +
Sbjct: 123 VRLFEEKGEKFKVEIIQDIAAKGAKTLTLYSHGDWVDFCLGPHGPSTGRVG-VIKILSSS 181

Query: 205 GAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSG 264
           GAYWRGD   PML RIYGTA+  ++ L +YL  +EES+KRDHRKL +E+DLFH      G
Sbjct: 182 GAYWRGDHRNPMLQRIYGTAFLDKKALQEYLTRIEESKKRDHRKLGKELDLFHFHPFAPG 241

Query: 265 VIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKC 323
             FW  KG  ++QTL  +MRR   +  Y EI TP + ++ LW+ SGHW  Y+ NMF V  
Sbjct: 242 SAFWSPKGTTLYQTLSQWMRRLTAETGYVEIKTPLMFNKGLWEASGHWGKYKENMFLVLD 301

Query: 324 ADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRV 383
            +    D   F+LKPMNCP H   F     SYR+LP+RL     ++RNE +GSL GL RV
Sbjct: 302 NESGEHD---FSLKPMNCPSHHLYFGFKRHSYRDLPLRLHTQDVLHRNEAAGSLGGLTRV 358

Query: 384 RGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDD 443
           R F QDDAH++CT++Q+ +E  +   L+  +Y   G  K   K STRPE+R+G DALWD 
Sbjct: 359 RQFAQDDAHIYCTEDQIGDEVRRFVKLLDHVYNAVGL-KYSAKFSTRPEQRLGEDALWDR 417

Query: 444 AENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLP 503
           AE+ ++GVL T+       +   V  GEGAFYGPK ++ + D+IGR WQ GTIQ+D+   
Sbjct: 418 AESALEGVLKTLG------VPYEVKPGEGAFYGPKIDFDVSDSIGRKWQLGTIQLDYLAA 471

Query: 504 SRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSS 563
            RF+  Y+   + +  PV++HRA++GS ERFI I+IE+F G  P WL+PIQA++ T+   
Sbjct: 472 QRFDLKYIGEDNAEHRPVVLHRAIYGSFERFIAILIEHFAGAFPAWLAPIQAVLVTVADR 531

Query: 564 AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRR 623
            ++YA+++ + L++    +E D R +++N KIRE  I+K+P  ++ GD E     +  RR
Sbjct: 532 QLDYARKVRDQLRAKGFRVELDDRGQSLNAKIREWQIQKLPFTLVIGDNEVEAGGVAPRR 591

Query: 624 FGSTTTQKVSLLDAIPILTKESLPP 648
           +G    + + L D   +L+KE+  P
Sbjct: 592 YGGEDLKSMKLEDFEALLSKEAALP 616


>gi|295706837|ref|YP_003599912.1| threonyl-tRNA synthetase [Bacillus megaterium DSM 319]
 gi|294804496|gb|ADF41562.1| threonyl-tRNA synthetase [Bacillus megaterium DSM 319]
          Length = 645

 Score =  550 bits (1416), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 267/644 (41%), Positives = 429/644 (66%), Gaps = 22/644 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSI 59
           M   IK+TFPDG++K +P  ++  D+A SIS  L KKA+A  +NG++ DL  P+ E GS+
Sbjct: 1   MSEIIKMTFPDGAVKEYPKGSSTEDIAASISPGLKKKALAGRVNGELLDLRTPIEEDGSL 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE--VQVAIGPIIEDGFYYDFDKEQPFSSD 117
           EIIT + P +L ++RHS AH+MA+A++ ++ +  VQ+ +GP+IE+GFYYD D E+  + +
Sbjct: 61  EIITQDAPEALEIMRHSTAHLMAQAIKRLYKDTKVQLGVGPVIENGFYYDIDMEESITPE 120

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +L +IEK+M++I+  +    ++ +S E+A +LF+   +  K+E++++IPA E VT+Y+QG
Sbjct: 121 DLGKIEKEMKKIVNSNIEIERKEVSREEAIQLFKEVGDELKLELIDAIPAGEKVTIYQQG 180

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           E+FDLCRG HV STG++K+ FKL+ VAGAYWRGDS+  ML RIYGTA+ T+ +L ++L  
Sbjct: 181 EFFDLCRGVHVPSTGKIKE-FKLLSVAGAYWRGDSDNQMLQRIYGTAFFTKADLDEHLRL 239

Query: 238 LEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEIN 295
           LEE+++RDHRKL +E++LF  ++  G G+  W  KG  I + +  Y+  +++   Y+ + 
Sbjct: 240 LEEAKERDHRKLGKELNLFTNSQKVGQGLPLWLPKGATIRRIIERYIVDKEVSLGYQHVY 299

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP +    L++ SGHW+ Y+ +MF     D+  +DL    L+PMNCP H+ V+  G+ SY
Sbjct: 300 TPVLGSVELYKTSGHWEHYQDDMFPAMEMDN--EDL---VLRPMNCPHHMMVYKQGIHSY 354

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+  E +++  L+ ++Y
Sbjct: 355 RELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEEFIRVVRLVEAVY 414

Query: 416 KDFGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
           KDFGFE    +LS R     EK    DA+W+ A++++K  +D +       ++     GE
Sbjct: 415 KDFGFENYSFRLSYRDPADTEKYFDDDAMWEKAQSMLKDAMDELD------LDYYEAEGE 468

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
            AFYGPK +  +K A+G++    T+Q+DF LP RF+  YV    ++  PV+IHR V  ++
Sbjct: 469 AAFYGPKLDVQVKTALGKEETLSTVQLDFLLPERFDLTYVGEDGKQHRPVVIHRGVVSTM 528

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNET 590
           ERF+  +IE +KG  P WL+P+Q  V  ++ +  ++YA+E+   L+   + +E D R+E 
Sbjct: 529 ERFVAFLIEEYKGAFPTWLAPVQVQVIPVSPTVHLQYAKEVQEQLQLAGIRVELDSRDEK 588

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           I YKIRE  ++KIP +++ GDKE  ++++ +R++G   ++ V  
Sbjct: 589 IGYKIREAQMQKIPYMLVVGDKEVEDKAVNVRKYGEQNSETVDF 632


>gi|302391179|ref|YP_003826999.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Acetohalobium
           arabaticum DSM 5501]
 gi|302203256|gb|ADL11934.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Acetohalobium
           arabaticum DSM 5501]
          Length = 639

 Score =  549 bits (1414), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 277/623 (44%), Positives = 403/623 (64%), Gaps = 19/623 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           + +T PDGS+  F    T  +VA  I   L K  +A  ++ K  D    + +   +EIIT
Sbjct: 4   VDITLPDGSVLEFDEEVTVREVAFEIGPRLGKATIAGKVDSKEVDADYVINDDVELEIIT 63

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIW--PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
            +    L + RHS AHIMA+AV+ I+   EVQ+AIGP IEDGFYYDFD  + FS ++L +
Sbjct: 64  IDSEEGLEIYRHSMAHIMAQAVERIYGSDEVQLAIGPSIEDGFYYDFDIPENFSDNDLEE 123

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE +MQEII  D    +  LS ++A E  +   E YKVE+LE +   + V+ Y+QG++ D
Sbjct: 124 IEAEMQEIIEEDLEIERIELSKKEAVEKMKDLGEDYKVEMLEEL-EDDAVSFYQQGDFID 182

Query: 182 LCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           LCRGPH+ STG+   + FKL+ VAGAYWRGD +  ML RIYGTA+  + +L ++L  LEE
Sbjct: 183 LCRGPHLTSTGKANAEGFKLLNVAGAYWRGDEDNKMLQRIYGTAFPNKSDLEEHLDRLEE 242

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQV 299
           ++KRDHRKL +++DLF + ++G G  F+H KG  +   LI + + + +   Y+EI TP +
Sbjct: 243 AKKRDHRKLGQKLDLFSLHDEGKGFPFFHPKGMVVRNELIDFWKEEHRQAGYKEIKTPVI 302

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           L+Q LW+QSGHWD Y+ +M+  +       D    A+KPMNCPG + V+   ++SYR+LP
Sbjct: 303 LNQDLWKQSGHWDHYKEDMYFTEI------DKEPHAVKPMNCPGGILVYKDKMRSYRDLP 356

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+ E G V+R+E SG+LHGLMRVR FTQDDAH+FC   Q+  E   +  L+  IY  FG
Sbjct: 357 IRMGELGLVHRHERSGTLHGLMRVRNFTQDDAHIFCLPSQIEEELTGVIKLVDRIYAPFG 416

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F    V+LST+P+K +GSD LWD A + ++  ++   N    ++N G    +GAFYGPK 
Sbjct: 417 F-NYRVELSTKPDKAMGSDELWDKATDALREAIEA--NDLDYKVNEG----DGAFYGPKI 469

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           ++ L+D +GR WQCGT+Q+DF +P RF+  YV    E+  PVMIHRA+FGS+ERF+GI+I
Sbjct: 470 DFHLEDCLGRTWQCGTVQLDFQMPERFDLTYVGQDGEEHRPVMIHRAIFGSLERFMGILI 529

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E++ G  P WL+PIQ  V  +T   ++YA ++   L    + +E D R E + YKIRE  
Sbjct: 530 EHYAGAFPTWLAPIQTEVIPVTDDHLDYAYQVKEELADAGVRVEVDARQEKVGYKIREAQ 589

Query: 600 IKKIPIIIICGDKEASERSIGIR 622
           ++++P ++I GD E  ++++ +R
Sbjct: 590 VQQVPYMLIVGDDEIEDKTVSVR 612


>gi|45658307|ref|YP_002393.1| threonyl-tRNA synthetase [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|59798553|sp|Q72PK6|SYT_LEPIC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|45601549|gb|AAS71030.1| threonyl-tRNA synthetase [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 638

 Score =  548 bits (1413), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 280/646 (43%), Positives = 408/646 (63%), Gaps = 21/646 (3%)

Query: 6   KLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGK-VCDLSDPVREGS-IEIIT 63
           +LT PD SIK      T  D  E     L  KA+AV +NG+ + DLS  V + S IE++T
Sbjct: 3   QLTLPDKSIKEVASGFTYRDFIEKELPFLKNKALAVRLNGEEILDLSRTVEKNSNIEVLT 62

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG---FYYDFDKEQPF-SSDEL 119
             +       +HS AH++  AVQ+++    + +GP+I++G   FYYD D +    + ++ 
Sbjct: 63  YSEKLGWETFQHSAAHLLGMAVQNLYKNANLTVGPVIDNGPGFFYYDIDFQGAIVTPEDF 122

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IE +M++I+  D P  ++ +S ++A E F+   E YK+EI++ IP++E V++Y  GEW
Sbjct: 123 PKIEAEMEKIVKADHPVWRKVVSKKQAIETFQKLGEKYKIEIIDGIPSEE-VSIYGMGEW 181

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPHV ++G V K FKL  ++GAYW+ D N  ML+RIYG A+ T++EL QYL+ +E
Sbjct: 182 FDLCRGPHVPNSG-VLKSFKLTAISGAYWKADKNNSMLTRIYGVAFPTKKELDQYLFQIE 240

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E++KRDHRK+ +EMDLF   ++G G  FWH KG  ++ +L  Y+R +  K  Y+EI TP 
Sbjct: 241 EAKKRDHRKIGKEMDLFSFQKEGPGFPFWHPKGTILWNSLAEYLRSECNKRGYQEIKTPA 300

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           VL   LW++SGHWD++  NM+          D   +ALKPMNCPG   ++ H L SYREL
Sbjct: 301 VLSSELWKKSGHWDNFHENMYFTDI------DEEDYALKPMNCPGCSLIYKHHLHSYREL 354

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R AEFGSV+R+E  G LHGL RVR FTQDD+H++   + + +E + I +   ++YK F
Sbjct: 355 PLRFAEFGSVHRHELHGVLHGLFRVRAFTQDDSHIYAPLDYLESEVMDIIDFTFTVYKKF 414

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF +    ++TRPEK  G D  W+ A + +K  L+      +  I  G+  GEGAFYGPK
Sbjct: 415 GFSEFKTFIATRPEKSQGKDEDWEFATSTLKQSLE------KKGIPYGIKEGEGAFYGPK 468

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ +KD+IGR WQCGTIQVDF++P RF+  Y +S  +K  PVMIHRA++GS+ERFIGI+
Sbjct: 469 IEFNIKDSIGRLWQCGTIQVDFSMPERFDLDYTDSDGQKKRPVMIHRAIYGSLERFIGIL 528

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+++G  PLW+SP Q  + T+T    +YA+ +   L      +E D RNE I  KIR+ 
Sbjct: 529 IEHYEGKFPLWISPNQIRILTVTEKVTDYAKNVYRELLDSGFRVELDTRNEKIGAKIRDS 588

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            +KK   ++I G+KE    ++ +R  G   T+ ++    I  L  E
Sbjct: 589 ILKKANYLLILGEKEMESNTLAVRMRGQEDTKILTRTGFISNLQDE 634


>gi|303248736|ref|ZP_07334989.1| threonyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
 gi|302489901|gb|EFL49829.1| threonyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
          Length = 647

 Score =  548 bits (1413), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 275/646 (42%), Positives = 405/646 (62%), Gaps = 18/646 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIEI--ITP 64
           +T  D S++       G  ++  IS    K AVA  ++GK  DL+ P+ EG  ++  +  
Sbjct: 3   VTIEDSSLEAAAGEPCGQVLSRGISGKRMKNAVACLVDGKPLDLTAPLPEGGRDLAPVAA 62

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           + P  LA+IRHS AHIMAEAV+ ++P  QV IGP IE+GFYYDF  E+PF+ ++L  IE 
Sbjct: 63  DSPEGLAIIRHSTAHIMAEAVKKLFPAAQVTIGPSIENGFYYDFAFERPFTPEDLEAIEA 122

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
           +MQ+ IA ++PF   ++    A+ LF S+ E YK+EI++     + V+LYR G + DLCR
Sbjct: 123 EMQKSIAANAPFSCTFVPKADAKALFASQGEVYKLEIMDENIVGDTVSLYRHGTFTDLCR 182

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +TG VK F KL+ VAGAYWRGD  RPML RIYGTA+ +  +L +YL  LEE++KR
Sbjct: 183 GPHVPTTGAVKAF-KLLSVAGAYWRGDEKRPMLQRIYGTAFASDADLKKYLRHLEEAKKR 241

Query: 245 DHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQ 302
           DHRKL  ++DLF  +E+ G+G+  WH KG  I   L  + RR+ ++  Y+ +  P +L +
Sbjct: 242 DHRKLGTQLDLFSFSEEVGAGMPIWHPKGELIRTILEDFERREHLRRGYQLVRGPLILRR 301

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGH+D+YR NM+  +       D + + +KPMNC  H+ ++   ++SYR+LP R 
Sbjct: 302 ELWERSGHYDNYRENMYFTEI------DGQAYGIKPMNCLSHMLIYKSRVRSYRDLPQRY 355

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            E G V+R+E SG LHGLMRVR FTQDDAH+ C  +Q+ +E   +   +  +   FGF+ 
Sbjct: 356 FELGVVHRHEKSGVLHGLMRVRQFTQDDAHILCRPDQLLDEITGVIKFVQDVVALFGFD- 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V LSTRPEK +GSD  WD A    K ++D +++     +   +  G+GAFYGPK +  
Sbjct: 415 YEVDLSTRPEKSIGSDEDWDRA---TKALIDAMESLG---LPYDINEGDGAFYGPKIDIK 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LKDA+ R WQC T+Q DF LP RF+  Y ++  E+  PVM+HR + G++ERF+G++IE+ 
Sbjct: 469 LKDALERRWQCATVQCDFTLPERFDLVYTDADGERKRPVMLHRVILGAVERFLGVLIEHT 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G LP WLSP QA +  +T +  E+A+E    L    + +E D RNE + +K+RE  ++K
Sbjct: 529 AGALPTWLSPEQARILIVTDAQKEFAEEAKAKLAEAGIRVELDERNEKLGFKVREAQMEK 588

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
           +P +++ GDKE     + +R          SL + + ++T + L P
Sbjct: 589 VPYMLVAGDKEKELGGLNVRLRSGENLGVKSLDEIVLMITADCLEP 634


>gi|317052582|ref|YP_004113698.1| threonyl-tRNA synthetase [Desulfurispirillum indicum S5]
 gi|316947666|gb|ADU67142.1| threonyl-tRNA synthetase [Desulfurispirillum indicum S5]
          Length = 657

 Score =  548 bits (1413), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 277/632 (43%), Positives = 405/632 (64%), Gaps = 23/632 (3%)

Query: 7   LTFPDGSIKNF---PVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           +T PDG+ K+F   PV  T  +VA SI R LAK AV+  ++G + D++ P+  + ++EII
Sbjct: 4   ITLPDGTQKHFEHSPV--TPMEVALSIGRRLAKDAVSARVDGVLVDMNTPLTADATLEII 61

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIW--PEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           T      L V+RHS +HIMA+AV+ ++   +V+VAIGP   +GFYYDFD E     ++L 
Sbjct: 62  TASSAEGLDVLRHSASHIMAQAVKDLFGGDKVKVAIGPSTSEGFYYDFDMEHRLVPEDLE 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IE +M EI A D PF+ + +   +A   F+ + E +KVE+L+     + V +Y+QG + 
Sbjct: 122 KIETRMAEIAAADQPFVCRKMERAEAINTFKQQGELFKVELLQQDILDDQVGIYQQGSFL 181

Query: 181 DLCRGPHVRSTGQVKK-FFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           DLCRGPH+ STG++    FKL+ +AGAYWRGD  RPML RIYGTA+ T++EL +YL+FLE
Sbjct: 182 DLCRGPHIPSTGKLGAGSFKLLSIAGAYWRGDEKRPMLQRIYGTAFATEKELREYLFFLE 241

Query: 240 ESEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           E++KRDHRKL +E+DLFH   E      F+H KG  ++  L+ ++R   +   Y E+ TP
Sbjct: 242 EAKKRDHRKLGKELDLFHFDPEVAVASPFFHPKGTVVYNQLLEFIREMYRYYGYGEVITP 301

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           QV+D  LW++SGH+D+Y  NM+  +       D +  ALKPMNCP HV ++    +SYR+
Sbjct: 302 QVMDVELWKRSGHYDNYVENMYFTEL------DGQHNALKPMNCPTHVMIYGASSRSYRD 355

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LPVR A+FG ++R E SG + GL RVR F QDDAH+FC  +Q+ +E   + +LI+  YK 
Sbjct: 356 LPVRYADFGRLHRYERSGVVQGLTRVRTFCQDDAHIFCRPDQIEDEIKNLIDLILKTYKV 415

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           F FE I + LSTRPEK +GSD +W  AE+ +   L+++  S +  IN G    +GAFYGP
Sbjct: 416 FDFEDIAIGLSTRPEKSIGSDEIWQKAESALAAALNSL--SVKFSINEG----DGAFYGP 469

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K ++ ++DAI R WQ  T+Q+DF++P RF A YV+   ++  PVMIHRAV GSIERF+G+
Sbjct: 470 KIDFQVRDAIRRSWQLATVQLDFSMPQRFGASYVDEQGQRQAPVMIHRAVLGSIERFMGL 529

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
            +E+  G LP WL+P+Q  +  +    + + Q++  +L      +E D  +E++  KIR 
Sbjct: 530 YLEHTAGALPFWLAPVQCSIIPVNDELLPFCQQLRQILTRLGYRVEVDASSESMGKKIRR 589

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
              +K P  ++ G KE  ER   +R +G   T
Sbjct: 590 SQTQKHPYTLVVGKKELEERIFAVRAYGHKDT 621


>gi|308272327|emb|CBX28933.1| Threonyl-tRNA synthetase [uncultured Desulfobacterium sp.]
          Length = 637

 Score =  548 bits (1412), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 270/640 (42%), Positives = 414/640 (64%), Gaps = 22/640 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           +++T PDGSIKNF    +G D+A+SIS  LA+  VA+ ++G + DL   + + S + ++T
Sbjct: 2   VRITLPDGSIKNFENALSGLDIAKSISEGLARNCVAMELDGNLVDLDTIISDDSKVRLVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
             D ++L ++RHS AH+MA+A+  I+ + ++ IGP++EDGFYYD D E P S ++  +IE
Sbjct: 62  ASDEKALEILRHSAAHVMAQAILHIYKDAKLTIGPVVEDGFYYDIDME-PVSREDFGKIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            ++++II+   PF ++ +S E+A + +  K E YK+EI+  +     ++LY QG++ DLC
Sbjct: 121 AEIKKIISAKIPFKRKLVSKEEALKFY--KDEPYKLEIISEL-EDGTISLYEQGDFTDLC 177

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+  TG +K   K+ KV+GAYWR D  +  L RIYGTA+ T++EL  YL+F+EE++K
Sbjct: 178 RGPHLPHTGFIKAI-KMTKVSGAYWRADQKKAQLQRIYGTAFYTKKELDDYLHFIEEAKK 236

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           R+HRK+   +DLF   ++  G+ F+H KG  +++ LISY + + +   Y E  TP +L++
Sbjct: 237 RNHRKIGMVLDLFSFHDEAPGMPFFHPKGMSVWEALISYWKIEHRAAGYVETKTPIMLNR 296

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHW++YR NM+       ++ D   +A+KPMNCPG + +F     SY++LP+R 
Sbjct: 297 SLWERSGHWENYRENMYT------SVVDETEYAIKPMNCPGGMLLFGMKPHSYKDLPLRS 350

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AE G V+R+E SG L GL RVR F QDDAH+F T EQ+ +E L +  L+  IY  FG   
Sbjct: 351 AEIGLVHRHELSGVLSGLFRVRAFHQDDAHIFMTPEQIESEILGVLKLVERIYSTFGL-S 409

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD-RINTGVLLGEGAFYGPKFEY 481
             ++LSTRPEK +G+D  W  A    KG+   +K    D + N G    +GAFYGPK + 
Sbjct: 410 FHLELSTRPEKSIGNDEQWAVA---TKGLESALKTYGVDYKTNEG----DGAFYGPKIDI 462

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+GR WQCGT+Q+D  LP RF+  Y++ ++EKC P+MIHR ++GSIERF GI+IE+
Sbjct: 463 HIKDALGRTWQCGTVQLDMALPERFDLSYIDKNNEKCRPIMIHRVIYGSIERFFGILIEH 522

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           F G  PLW++P+QA +  I    + YA  I ++L+   +  E D R E++  KIR+  + 
Sbjct: 523 FAGKFPLWMAPVQAALLPINDELIPYAAGIRDVLEKEGIRTELDSRTESLKKKIRDAQLS 582

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            +P+II CG KE    ++ +R         V++ D + I+
Sbjct: 583 YVPLIITCGPKEMESGTVSVRNLSGKIKYGVTIEDFVKIV 622


>gi|299822779|ref|ZP_07054665.1| threonine--tRNA ligase [Listeria grayi DSM 20601]
 gi|299816308|gb|EFI83546.1| threonine--tRNA ligase [Listeria grayi DSM 20601]
          Length = 640

 Score =  548 bits (1412), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 273/648 (42%), Positives = 417/648 (64%), Gaps = 20/648 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           +K+TFPDG++K F    + +D+A SIS  L KKA+A  ING++ DL+ P+ E G IEI+T
Sbjct: 1   MKITFPDGAVKEFDKGVSTADIAASISPGLKKKALAGKINGELVDLATPIEEDGKIEIVT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+   +L ++RHS AH++A+A++ ++P+++  +GP IE GFYYD D E+P S +    IE
Sbjct: 61  PDHEDALGILRHSTAHLLAQALKRLYPDIKFGVGPAIETGFYYDVDTEEPISEESFPVIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+MQ+I+  + P +++ +S E+A + FE+  + YK+E++E+IPA E VT+Y QGE+FDLC
Sbjct: 121 KEMQKIVRENLPIVREVVSREEAIKRFEAIGDHYKLELIEAIPADETVTIYSQGEFFDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RG HV STG++ + F+L+ VAGAYWRGDSN  ML RIYGTA+  +++L  +L   EE+++
Sbjct: 181 RGIHVPSTGKL-QVFQLLNVAGAYWRGDSNNKMLQRIYGTAFFDKKDLKAFLKMQEEAKE 239

Query: 244 RDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLD 301
           RDHRKL +E+ LF I+++ G G+  W  KG  I + +  Y+  R+ +  Y  + TP +  
Sbjct: 240 RDHRKLGKELGLFAISQEVGQGLPLWLPKGATIRRVIERYIVDREERLGYSHVYTPIMAK 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
              ++QSGHWD Y  +MF     D+         L+PMNCP H+ V+ + + SYRELP+R
Sbjct: 300 VDFYKQSGHWDHYHEDMFPPMKMDN-----EELVLRPMNCPHHMMVYKNDIHSYRELPIR 354

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AE G ++R E SG+L GL RVRG T +DAHVF   +Q+ +E  ++  LI+++YKDF   
Sbjct: 355 IAELGLMHRYEMSGALSGLQRVRGMTLNDAHVFVRPDQIKDEFKRVLELILAVYKDFDIT 414

Query: 422 KIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
               +LS R     EK    DA+W+ A+ ++K  +D ++      ++     GE AFYGP
Sbjct: 415 DYKFRLSYRDPENTEKYFDDDAMWEKAQTMLKDAMDEME------MDYFEAEGEAAFYGP 468

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  +K AIG++    T+Q+DF LP RF+  Y+    EK  PV+IHR V  ++ERF+  
Sbjct: 469 KLDVQVKTAIGKEETLSTVQLDFLLPERFDLTYIGEDGEKHRPVVIHRGVVSTMERFVAY 528

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +IE +KG  P WL+PIQ  +  +   A  +YA+E+ + L    L +E D RNE + YKIR
Sbjct: 529 LIEEYKGAFPTWLAPIQMQIIPVNRDAHFDYAKEVEDKLVRAGLRVEIDDRNEKLGYKIR 588

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           E   +KIP  ++ GD+E+   ++ IRR+GS  ++ +S+ D I  +  E
Sbjct: 589 EAQTQKIPYALVVGDQESENGTVNIRRYGSKDSETLSVDDFIKQVVAE 636


>gi|24213940|ref|NP_711421.1| threonyl-tRNA synthetase [Leptospira interrogans serovar Lai str.
           56601]
 gi|59798590|sp|Q8F6R1|SYT_LEPIN RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|24194795|gb|AAN48439.1|AE011305_9 threonyl-tRNA synthetase [Leptospira interrogans serovar Lai str.
           56601]
          Length = 638

 Score =  548 bits (1411), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 279/646 (43%), Positives = 408/646 (63%), Gaps = 21/646 (3%)

Query: 6   KLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGK-VCDLSDPVREGS-IEIIT 63
           +LT PD SIK      T  D  E     L  KA+AV +NG+ + DLS  V + S IE++T
Sbjct: 3   QLTLPDKSIKEVASGFTYRDFIEKELPFLKNKALAVRLNGEEILDLSRTVEKNSNIEVLT 62

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG---FYYDFDKEQPF-SSDEL 119
             +       +HS AH++  AVQ+++    + +GP+I++G   FYYD D +    + ++ 
Sbjct: 63  YSEKLGWETFQHSAAHLLGMAVQNLYKNANLTVGPVIDNGPGFFYYDIDFQGAIVTPEDF 122

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IE +M++I+  D P  ++ +S ++A E F+   E YK+EI++ IP++E V++Y  GEW
Sbjct: 123 PKIEAEMEKIVKADHPVWRKVVSKKQAIETFQKLGEKYKIEIIDGIPSEE-VSIYGMGEW 181

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPHV ++G +K F KL  ++GAYW+ D N  ML+RIYG A+ T++EL QYL+ +E
Sbjct: 182 FDLCRGPHVPNSGILKSF-KLTAISGAYWKADKNNSMLTRIYGVAFPTKKELDQYLFQIE 240

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E++KRDHRK+ +EMDLF   ++G G  FWH KG  ++ +L  Y+R +  K  Y+EI TP 
Sbjct: 241 EAKKRDHRKIGKEMDLFSFQKEGPGFPFWHPKGTILWNSLAEYLRSECNKRGYQEIKTPA 300

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           VL   LW++SGHWD++  NM+          D   +ALKPMNCPG   ++ H L SYREL
Sbjct: 301 VLSSELWKKSGHWDNFHENMYFTDI------DEEDYALKPMNCPGCSLIYKHHLHSYREL 354

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R AEFGSV+R+E  G LHGL RVR FTQDD+H++   + + +E + I +   ++YK F
Sbjct: 355 PLRFAEFGSVHRHELHGVLHGLFRVRAFTQDDSHIYAPLDYLESEVMDIIDFTFTVYKKF 414

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF +    ++TRPEK  G D  W+ A + +K  L+      +  I  G+  GEGAFYGPK
Sbjct: 415 GFSEFKTFIATRPEKSQGKDEDWEFATSTLKQSLE------KKGIPYGIKEGEGAFYGPK 468

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ +KD+IGR WQCGTIQVDF++P RF+  Y +S  +K  PVMIHRA++GS+ERFIGI+
Sbjct: 469 IEFNIKDSIGRLWQCGTIQVDFSMPERFDLDYTDSDGQKKRPVMIHRAIYGSLERFIGIL 528

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+++G  PLW+SP Q  + T+T    +YA+ +   L      +E D RNE I  KIR+ 
Sbjct: 529 IEHYEGKFPLWISPNQIRILTVTEKVTDYAKNVYRELLDSGFRVELDTRNEKIGAKIRDS 588

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            +KK   ++I G+KE    ++ +R  G   T+ ++    I  L  E
Sbjct: 589 ILKKANYLLILGEKEMESNTLAVRMRGQEDTKILTRTGFISNLQDE 634


>gi|82523876|emb|CAI78599.1| threonyl-tRNA synthetase [uncultured delta proteobacterium]
          Length = 631

 Score =  548 bits (1411), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 275/616 (44%), Positives = 399/616 (64%), Gaps = 24/616 (3%)

Query: 35  AKKAVAVAINGKVCDLSDPVRE-GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQ 93
           + K V    N    DL+  + E G I  I P       ++RHS +HIMA+AV  ++P ++
Sbjct: 29  SNKFVVAKYNDNFVDLTSLITEPGYILGILPNSEEGKGILRHSASHIMAQAVMELFPGIK 88

Query: 94  VAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESK 153
           +AIGP IE+GFYYDF++ + F+ D+L  IEK+M EII +  P +++ +S E+A E F+  
Sbjct: 89  IAIGPAIENGFYYDFERAESFTPDDLEHIEKRMHEIIKKSVPIVREDISKEQAIEYFKQH 148

Query: 154 KEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSN 213
            E YKVE+LE I A  NV++Y+QG++ DLCRGPH+  TG++K F KL+ +AGAYWRG+  
Sbjct: 149 GEIYKVELLEDI-ADNNVSIYKQGDFVDLCRGPHLIHTGKLKAF-KLLSIAGAYWRGNEK 206

Query: 214 RPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKG 272
             ML RIYGTA+ T +EL ++L  LEE +KRDHRKL +E+DLF ++E+ G+G+I WH KG
Sbjct: 207 NKMLQRIYGTAFPTSKELKEHLNHLEEVKKRDHRKLGKELDLFSLSEEVGAGMILWHPKG 266

Query: 273 WKIFQTLIS--YMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
             +F+ L+    ++  +K  Y+++  PQ+L   LW++SGH+D YR NM+  +       D
Sbjct: 267 -AMFRYLLEDFEIKEHLKRGYQKVIGPQLLRSELWKKSGHFDHYRENMYFSEI------D 319

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
            +++ +KPMNC  H+ ++   + SYR+LP+R  E G+V+R+E SG LHGL+RVR FTQDD
Sbjct: 320 NQSYGIKPMNCLAHMLIYKSHIHSYRDLPIRYFELGTVHRHEKSGVLHGLLRVREFTQDD 379

Query: 391 AHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKG 450
           AH+ CT EQ+ NE   I + I  +   FGF K  V++STRPE  +GSD  W+ A N +K 
Sbjct: 380 AHILCTPEQLDNEIKSILDFIKYVMGIFGF-KYEVEISTRPEHSIGSDEDWERATNALKS 438

Query: 451 VLDTIKNSSQDRINTGVLL--GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
            L+           TG  L  G+GAFYGPK ++ LKDA+ R WQC TIQ DF LP RF  
Sbjct: 439 ALE--------ESGTGYDLNEGDGAFYGPKIDFKLKDALDRKWQCATIQCDFTLPERFEL 490

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYA 568
            YV     K  PVM+HR + G+IERF+GI+IE++ G  P+WLSP+QA++ T+T    EYA
Sbjct: 491 SYVGQDGVKYRPVMLHRVILGAIERFVGILIEHYAGAFPVWLSPVQAVILTVTDRVDEYA 550

Query: 569 QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
           Q +   L    + +E D RNE +  K+RE  ++KIP ++I GDKE SE+ + +R      
Sbjct: 551 QNLYQELIDADIRVEMDIRNEKLGLKVREAQLQKIPYMLIIGDKEVSEKRVTLRCRDDKK 610

Query: 629 TQKVSLLDAIPILTKE 644
             ++++ D I ++ K+
Sbjct: 611 QSELNIEDFIGLVKKD 626


>gi|167746735|ref|ZP_02418862.1| hypothetical protein ANACAC_01447 [Anaerostipes caccae DSM 14662]
 gi|167653695|gb|EDR97824.1| hypothetical protein ANACAC_01447 [Anaerostipes caccae DSM 14662]
          Length = 644

 Score =  547 bits (1410), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 277/642 (43%), Positives = 403/642 (62%), Gaps = 16/642 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           +K+T  DGS+K +    +  D+A+ IS  LA+ A A  +NG+V DL   + +   + I+T
Sbjct: 1   MKITLKDGSVKEYSQSMSVIDIAKDISEGLARAACAGEVNGEVVDLRTILEDDCELNILT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +        RH+ +HI+A+AV+ ++PE ++AIGP I++GFYYD +K+ PF+ D+L +IE
Sbjct: 61  FDSEGGRHAFRHTASHILAQAVKRLYPETKLAIGPSIDNGFYYDMEKDTPFTQDDLEKIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M++I+             E+A    + + E YKVE++E +P    ++ Y+QGE+ DLC
Sbjct: 121 AEMKKIVKEGLQITCFTKPREEAIAFMKERNEPYKVELIEDLPEDSVISFYQQGEFIDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+ +T  VK F KL  +AGAYWRG+    ML+RIYGTA+  + EL  YL  +EE++K
Sbjct: 181 AGPHLMTTKPVKAF-KLTSLAGAYWRGNEKNQMLTRIYGTAFAKKAELKDYLTMMEEAKK 239

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           RDHRKL +E+ LF + ++G G  F+   G  +  TL+ Y R    K  Y EI++P +L +
Sbjct: 240 RDHRKLGKELGLFMMRDEGPGFPFFLPNGMVLKNTLLDYWREIHNKAGYVEISSPIMLSR 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
           HLW+ SGHWD Y+ NM+       T+ D   FA+KPMNCPG V V+    +SYR+LP+R+
Sbjct: 300 HLWETSGHWDHYQENMYT------TVIDEEDFAIKPMNCPGGVLVYQSEPRSYRDLPLRM 353

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            E G V+R+E SG LHGLMRVR FTQDDAH+F   EQ+ +E   +  LI  +Y  FGF K
Sbjct: 354 GELGLVHRHEKSGQLHGLMRVRCFTQDDAHIFMMPEQIKDEIKGVAALIDQVYSLFGF-K 412

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +GSD  W+ A + ++  LD +       ++  V  G+GAFYGPK ++ 
Sbjct: 413 YHVELSTRPEDSMGSDEDWEMATDSLRSALDDLG------LDYVVNEGDGAFYGPKIDFH 466

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+D+IGR WQCGTIQ+DF LP RF+  Y  +  EK  P+MIHR  FGSIERFIGI+IE+F
Sbjct: 467 LEDSIGRTWQCGTIQLDFQLPLRFDLHYTGADGEKHRPIMIHRVAFGSIERFIGILIEHF 526

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P+Q  V  I+   ++Y  ++ + LK+  +  E D R E + YKIRE  + K
Sbjct: 527 AGAFPTWLAPVQVKVIPISDKHLDYGTKVLDALKAAGIRAEIDTRAEKMGYKIREAQLHK 586

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IP +++ G KE   +++ +R        ++SL D I  + KE
Sbjct: 587 IPYMLVVGGKEEENQAVSVRSRFKGDEGQMSLDDFICAIRKE 628


>gi|239905697|ref|YP_002952436.1| threonyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
 gi|259516431|sp|C4XL11|SYT_DESMR RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|239795561|dbj|BAH74550.1| threonyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
          Length = 647

 Score =  547 bits (1410), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 273/652 (41%), Positives = 413/652 (63%), Gaps = 23/652 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIEI--I 62
           +++T  D S++     A G  ++ ++S    K AVA  ++G+  DL+ P+ E + E+  +
Sbjct: 1   MQVTIEDQSLEAAAGEACGQVLSRAVSGKRLKNAVACLVDGQPRDLAFPLPEDAHELALV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
             + P  L++IRHS AHIMAEAV++++P VQV IGP IE+GFYYDF  E+PF+ D+L  I
Sbjct: 61  AADSPMGLSIIRHSAAHIMAEAVKTLFPSVQVTIGPAIENGFYYDFAYERPFTPDDLEAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +MQ+ IA + PF   Y+    A+ LF ++ E+YK+EI++     + V+LYR G + DL
Sbjct: 121 EAEMQKSIAANQPFSCTYVPKADAKALFAAQGESYKLEIMDENIVGDTVSLYRHGTFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +TG V+   KL+ VAGAYWRGD  RPML RIYGTA+ +  +L  YL+ +EE++
Sbjct: 181 CRGPHVPTTGLVRAV-KLLSVAGAYWRGDEKRPMLQRIYGTAFASAADLKTYLHHIEEAK 239

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVL 300
           KRDHRKL  ++DLF  +E+ G+G+  WH KG  I   +  + RR+ ++  Y+ +  P +L
Sbjct: 240 KRDHRKLGAQLDLFSFSEEVGAGMCIWHPKGELIRTIIEDFERREHLRRGYDLVRGPLIL 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            + LW++SGH+D+YR NM+  +       D +++ +KPMNC  H+ ++   ++SYR+LP 
Sbjct: 300 RRELWERSGHYDNYRENMYFTEI------DEQSYGIKPMNCLSHMLIYKSRVRSYRDLPQ 353

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R  E G V+R+E SG LHGL+RVR FTQDDAH+ C  +Q+  E   +   +  +   FGF
Sbjct: 354 RYFELGVVHRHEKSGVLHGLLRVRQFTQDDAHILCRPDQLQEEITGVVRFVQDVVGLFGF 413

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           +    +LSTRPEK +GSD  WD A   +   +++I    +  +N G    +GAFYGPK +
Sbjct: 414 D-FEAELSTRPEKSIGSDEDWDRATKALVDAMESIGLPYE--VNEG----DGAFYGPKID 466

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
             LKDA+ R WQC TIQ DF LP RF+  Y ++  E+  PVM+HR + G++ERF+G++IE
Sbjct: 467 IKLKDALDRRWQCATIQCDFTLPERFDLVYTDADGERKRPVMLHRVILGAVERFLGVLIE 526

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +  G LP WLSP+QA +  +T +  E+A++    LK   + +E D RNE + +K+RE  +
Sbjct: 527 HTAGALPTWLSPVQARILIVTDAQKEFAEQALARLKEAGIRVELDDRNEKLGFKVREAQV 586

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           +KIP +++ GDKE     + + R  S     V  LD + ++    +  DCQ+
Sbjct: 587 EKIPYMLVAGDKEKELGGLNV-RLRSGENLGVKTLDEVALM----ITADCQE 633


>gi|288574759|ref|ZP_06393116.1| threonyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM
           11002]
 gi|288570500|gb|EFC92057.1| threonyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM
           11002]
          Length = 630

 Score =  547 bits (1409), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 275/618 (44%), Positives = 406/618 (65%), Gaps = 20/618 (3%)

Query: 34  LAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEV 92
           L K A+A  +NG+  DL   V  + S+E IT +    L ++RHS AH++A+A   ++P  
Sbjct: 28  LDKGALAAKVNGEELDLDVEVSCDASVEPITSDTEEGLEILRHSTAHLLAQAATRLFPGA 87

Query: 93  QVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFES 152
            VAIGP+I+DGFYYD + ++P S  +L  +EK+M+ I+ R  P  +Q +S E+A ELF+ 
Sbjct: 88  VVAIGPVIKDGFYYDIEFKEPISEADLPALEKEMRRIVKRGIPLKRQRVSREEAIELFKE 147

Query: 153 KKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDS 212
           +K+ YKVEILE I   ++V LY Q E+ DLCRGPHV +T +V + FKL+ VAGAYWRGD 
Sbjct: 148 RKDLYKVEILEGID-DDSVNLYWQDEYVDLCRGPHVPNT-RVLQNFKLLSVAGAYWRGDE 205

Query: 213 NRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKG 272
           N  ML+RIYGTA+ T+++L  Y+  +EE++KRDHRK+ RE+ LF + ++G G  F+H KG
Sbjct: 206 NNIMLTRIYGTAFATKEDLEAYVTRMEEAKKRDHRKIGRELGLFSLHKEGPGFPFFHPKG 265

Query: 273 WKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
             +  TLI +  +   K+ Y++I TP +L++ LW QSGHWD YR NM+  +  D      
Sbjct: 266 MVVINTLIDFWSKVHRKNGYDQIRTPMILNRDLWIQSGHWDHYRENMYFTEIDD------ 319

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
           + +A+KPMNCPG + V+   L SYR+LP+RL E G V+R+E SG LHGLMRVR FTQDDA
Sbjct: 320 QPYAIKPMNCPGGILVYKSDLHSYRDLPLRLGELGIVHRHEKSGVLHGLMRVRCFTQDDA 379

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKD-FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKG 450
           H +CT +Q+ +E   I +++  IY + FGF K  V+LSTRP+  +GSD +W+ AE  ++ 
Sbjct: 380 HHYCTPDQIKDEVSLIMDMVDYIYSEVFGF-KFHVELSTRPDNSMGSDEMWELAEKSLRE 438

Query: 451 VLDTIKNSSQDRINTGVL-LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAF 509
           VL       ++R  T VL  G+GAFYGPK ++ L+D IGR WQCGTIQ+DF +P +F+  
Sbjct: 439 VL-------EERGTTYVLNPGDGAFYGPKIDFHLEDCIGRTWQCGTIQLDFQMPEKFDVT 491

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQ 569
           Y+ S  ++  P M+HR + GSIERF+GI+IE++ G  P W++P+Q  V  +    V+YA+
Sbjct: 492 YIGSDGKEHRPAMLHRTILGSIERFLGILIEHYAGAFPFWIAPVQVKVLAVGDDHVDYAK 551

Query: 570 EIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           ++  LL+     +E D R+E +  KIR+  ++K+P +++ GDKE    ++ +R       
Sbjct: 552 DLKALLQDREYRVELDCRDEKLGRKIRDAQMEKVPFMLVVGDKELETGTVSVRDRSEGDK 611

Query: 630 QKVSLLDAIPILTKESLP 647
             +S  D + +L  +  P
Sbjct: 612 GSMSKEDLLELLKGQFSP 629


>gi|224370824|ref|YP_002604988.1| threonyl-tRNA synthetase [Desulfobacterium autotrophicum HRM2]
 gi|259516390|sp|C0QAP1|SYT_DESAH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|223693541|gb|ACN16824.1| ThrS2 [Desulfobacterium autotrophicum HRM2]
          Length = 636

 Score =  547 bits (1409), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 268/637 (42%), Positives = 405/637 (63%), Gaps = 20/637 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           I +T PD SIK+F  +  G DVA  IS   A+  VA+ I+G++ DL   +R + ++ +IT
Sbjct: 2   INITLPDDSIKSFKEYPKGMDVARGISEGFARNCVAMEIDGQLLDLDVEIRNDCAVRLIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
             D  ++ ++RHS AH+MAEAVQ++  + ++ IGP++EDGFYYD D   P S  +  +IE
Sbjct: 62  TRDAEAVEILRHSAAHVMAEAVQNLHADAKLTIGPVVEDGFYYDIDM-APISDADFPKIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M +I+    PF +  ++ ++A ELF  K   YKVE++  +   + +++Y+QG++ DLC
Sbjct: 121 AEMAKIVKAKKPFQRSEITKQEALELF--KDNPYKVELINGLD-DQTISIYQQGDFVDLC 177

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+  TG +K   KLMK +GAYWR D  +  L R+YGTA+  ++EL  YL+ +EE++K
Sbjct: 178 RGPHIPHTGMIKGL-KLMKTSGAYWRADQEKAQLQRLYGTAFFDKKELKAYLHLIEEAKK 236

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRK+   M LF   ++ +G+ F+H KG +++  L++Y R + +   Y E  TP ++ +
Sbjct: 237 RDHRKIGTRMGLFSFHQEAAGMPFFHAKGMEMWNELLAYWRDEHRAAGYVETKTPVMMSR 296

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
           HLW++SGHW++YR NM+       ++ D   +A+KPMNCPG + ++     SYR+LP+R 
Sbjct: 297 HLWEKSGHWENYRENMYT------SVVDGEEYAIKPMNCPGGMLLYKTESHSYRDLPLRA 350

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            E G V+R+E SG+L GL RVR F QDDAH+F T EQ+ +E L +  L+  IY  FG   
Sbjct: 351 GEIGLVHRHELSGALSGLFRVRAFHQDDAHIFMTPEQIESEILGVLELVERIYSRFGL-G 409

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             ++LSTRP+K +GSD  W +A N +K  LD  K      IN G    +GAFYGPK +  
Sbjct: 410 FHLELSTRPKKSIGSDEQWAEATNGLKNALD--KYGQPYAINEG----DGAFYGPKIDIH 463

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+GR WQCGT+Q+D  LP RF+  Y  + +EK  P+MIHR ++GSIERF GI++E+F
Sbjct: 464 IKDALGRTWQCGTVQLDMALPERFDLTYKGADNEKHRPIMIHRVIYGSIERFFGILVEHF 523

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  PLWL+P+QA+V  I     ++AQ +   L+S+ +  + D R E++  KIRE  +  
Sbjct: 524 AGKFPLWLAPVQAVVLPINDDLADHAQTVKKELESNGIRCDVDLRTESLKKKIREAQVNY 583

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
           +P+II  G+KE    ++ +R         +S+ D IP
Sbjct: 584 VPLIITIGEKEKESGTLSVRTLDGKVRMGLSMADFIP 620


>gi|256830760|ref|YP_003159488.1| threonyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
 gi|256579936|gb|ACU91072.1| threonyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
          Length = 644

 Score =  547 bits (1409), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 277/636 (43%), Positives = 404/636 (63%), Gaps = 25/636 (3%)

Query: 22  TGSDVAESI-SRSLAKKAVAVAINGKVCDLSDPVREGS--IEIITPEDPRSLAVIRHSCA 78
           T +DV  ++ S    K AVA   +G + DL+ PV  G+  +E +  E    L+V+RHS A
Sbjct: 16  TCADVLRAVLSGKKMKSAVACVCDGALLDLARPVPAGTAVMEPVFLESAEGLSVLRHSAA 75

Query: 79  HIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLK 138
           H+MAEAV+ ++P  +V IGP +E GFYYDFD E+PF+ ++L +IE +M   +  + PF +
Sbjct: 76  HVMAEAVKELFPSAKVTIGPDVESGFYYDFDFERPFTPEDLEKIEARMTASVVANQPFSR 135

Query: 139 QYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFF 198
           + +S  +AR LF S  E YK+EI++ + A + V+LYR G + DLCRGPH+ STG ++   
Sbjct: 136 EEMSAVEARALFASMGETYKLEIIDDLGA-DQVSLYRHGNFVDLCRGPHLPSTGFLQAV- 193

Query: 199 KLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI 258
           KL  VAGAYWRGDS RPML RIYGTA+ T +EL  +L  +EE++KRDHRKL  ++DLF  
Sbjct: 194 KLTSVAGAYWRGDSKRPMLQRIYGTAFATPKELKAHLAMIEEAKKRDHRKLGPQLDLFSF 253

Query: 259 AE-DGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
            E  G+G+ +WH KG  +   L  ++ ++ I+  Y  + TPQ+L + LW+ SGH+ +YR 
Sbjct: 254 HERGGAGMAYWHPKGGLVRTILEDFVNKEMIRRGYGIVRTPQILKRDLWETSGHYANYRE 313

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
           NM+  +       D   + +KPMNC  H+ ++N   +SYR+LPVRL EFG V+R+E SG 
Sbjct: 314 NMYFTEI------DEVPYGVKPMNCVAHMLIYNTSQRSYRDLPVRLFEFGVVHRHELSGV 367

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
           LHGLMRVR FTQDDAH+ C  +Q+ +E   +   I  +   FGFE  M ++STRPEK +G
Sbjct: 368 LHGLMRVRQFTQDDAHIICRPDQLLDEIKGVMTWIQDLMGVFGFEYSM-EISTRPEKSIG 426

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
           SDA W+ A + +   +       Q  +   +  G+GAFYGPK +  L+D +GR WQC TI
Sbjct: 427 SDADWERATSALMDAM------GQMELPYTINEGDGAFYGPKIDVKLRDCLGRQWQCSTI 480

Query: 497 QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI 556
           QVDF LP RF+  YV    E+  PVM+HRA+ GS+ERFIGI+ E+F G  P WL+P+QA 
Sbjct: 481 QVDFTLPDRFDLLYVGEDGERHRPVMVHRAIMGSVERFIGILTEHFAGAFPAWLAPVQAR 540

Query: 557 VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASE 616
           + T+T +  E+A++  + L+   + +E D RNE + YK+RE  ++K+P  ++ GD+E  +
Sbjct: 541 ILTVTDNHDEFARKCQDALQREGVRVELDLRNEKLGYKVREAQMEKVPYALVIGDQEVEQ 600

Query: 617 RSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
             + +R  G      +S +DA      + L  +C+K
Sbjct: 601 ACVNVRMLGGNNLGVMS-VDAF----ADHLRQECEK 631


>gi|217077729|ref|YP_002335447.1| threonyl-tRNA synthetase [Thermosipho africanus TCF52B]
 gi|217037584|gb|ACJ76106.1| threonyl-tRNA synthetase [Thermosipho africanus TCF52B]
          Length = 636

 Score =  547 bits (1409), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 280/624 (44%), Positives = 404/624 (64%), Gaps = 21/624 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           +K+T PDGS K +    T + +A  IS  L + AV   +NG + DL  P+  +  I+IIT
Sbjct: 1   MKVTLPDGSEKEYKDKVTLAQIAREISEGLFRNAVGGIVNGMLWDLERPIDFDCEIKIIT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIW-PE-VQVAIGPIIEDGFYYDFD-KEQPFSSDELA 120
            +D  +    RH+ AHIMA+AV  I+ PE V++ IGP IE+GFYYDF+        ++L 
Sbjct: 61  KKDKEAPEFFRHTMAHIMAQAVMRIYGPENVRLGIGPTIENGFYYDFEILNGVIKEEDLE 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IEK+M++II  D    +  L+ ++A ++ + K + YKVE+++ I   E V+ Y+QGE+ 
Sbjct: 121 KIEKEMKKIIKEDLKIERFELNKDEAIKMMDEKGQIYKVELIKEI-QDEKVSFYKQGEFV 179

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+  TG +K F KL+ V+GAYWRG    PML RIYGTA+ T+ EL  YL  LEE
Sbjct: 180 DLCRGPHLPRTGMIKHF-KLLSVSGAYWRGSEKNPMLQRIYGTAFATKDELDNYLKMLEE 238

Query: 241 SEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++KRDHRKL  ++ LF I  D  +G+  +  KG  I   L+S+ R+  K+  Y+E+ TP 
Sbjct: 239 AKKRDHRKLGPKLGLFFINTDVAAGMPIFLPKGATILNELMSFSRQLHKEYGYKEVMTPL 298

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +++  LW QSGHWD Y+ NM+       T K+   +A+KPMNCPGH+ ++ + + SYR+L
Sbjct: 299 IMNVKLWHQSGHWDHYKDNMYF------TEKEETEYAVKPMNCPGHILIYKNDVVSYRDL 352

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RL EFG V+R E SG LHGL+RVR FTQDDAH+FC ++Q+  E   +  LI  +YK F
Sbjct: 353 PIRLFEFGKVHRYERSGVLHGLLRVRAFTQDDAHIFCRQDQIEEEVSSVVRLIDELYKPF 412

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF      LST PE  +G +  W+ A N +K VL+ IK      ++  +  GEGAFYGPK
Sbjct: 413 GF-TYRATLSTMPEDHMGDEETWEKATNALKKVLEDIK------LDFDIAEGEGAFYGPK 465

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++ +KD++GR+WQC TIQ+DF +P RF+  YV+    +  PVMIH A +GS+ERF GI+
Sbjct: 466 VDFHVKDSLGREWQCATIQLDFQMPERFDLKYVDKDGIEKRPVMIHTAKYGSLERFFGIL 525

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE++ G  PLW+SP+Q +V  ++   ++YA+++A LL   ++ +E D RNET+ YKIRE 
Sbjct: 526 IEHYAGAFPLWISPVQVLVLPVSDKYIDYAKKVARLLSESNIRVEVDSRNETLGYKIREA 585

Query: 599 SIKKIPIIIICGDKEASERSIGIR 622
            I K+P +II G+ E     I +R
Sbjct: 586 QISKVPYMIIVGENEEKSGKISVR 609


>gi|154249412|ref|YP_001410237.1| threonyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
 gi|154153348|gb|ABS60580.1| threonyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
          Length = 638

 Score =  546 bits (1408), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 273/646 (42%), Positives = 409/646 (63%), Gaps = 21/646 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           +++  PDGS++ +    T   +A+ IS  L + A    +NG++ DL  P+  +  + II 
Sbjct: 1   MQIRLPDGSVREYSQPVTPGQIAKEISEGLWRNAAGALVNGQLWDLERPIDFDCELRIIK 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIW--PEVQVAIGPIIEDGFYYDFD-KEQPFSSDELA 120
            +DP++  + RH+ +HIMA+AV  I+    V++ IGP IE+GFYYDFD      + ++L 
Sbjct: 61  LDDPQAAEIYRHTMSHIMAQAVMRIYGAENVKLGIGPTIENGFYYDFDIANVKITEEDLP 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IE++M++II  D P  +  L  ++A EL ESK + YK+E++  IP  E V+ Y+QGE+ 
Sbjct: 121 KIEEEMKKIIKEDLPIERLELPKKEAIELMESKGQMYKIELINEIP-DEKVSFYKQGEFI 179

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ STG+VK   KL+ V+GAYWRG+   PML RIYGTA+  + EL  YL  LEE
Sbjct: 180 DLCRGPHLPSTGKVKHL-KLLSVSGAYWRGNEKNPMLQRIYGTAFAKKDELDNYLKMLEE 238

Query: 241 SEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           + KRDHR+L  +++LF I  D  +G+  +   G  + + L+S  R   K   Y+E+ TP 
Sbjct: 239 ARKRDHRRLGPQLELFFINTDVAAGMPIFLPYGMTVLKELMSLSRELHKKYGYKEVGTPL 298

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++ + LW+QSGHWD Y+ NM+       T K+  T+A+KPMNCPGH+ ++ +   SY++L
Sbjct: 299 IMHEKLWRQSGHWDHYKNNMYF------TEKEEVTYAVKPMNCPGHILIYKNKPVSYKDL 352

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RL EFG V+R E  G LHGL+RVR FTQDDAH+FC ++Q+ +E   +   I  +Y  F
Sbjct: 353 PIRLFEFGRVHRYERGGVLHGLLRVRTFTQDDAHIFCREDQIVDEVTNVVRFINELYGIF 412

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF      LST PE  +G +A W+ A   ++  L+ +K      +   V  GEGAFYGPK
Sbjct: 413 GF-SYRATLSTMPEDHMGDEATWEKATEGLRNALEEMK------VPYEVAEGEGAFYGPK 465

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++ ++D +GR+WQC TIQ+DF +P RF+  Y +S   +  PVMIHRA++GSIERF GI+
Sbjct: 466 IDFHVRDVLGREWQCATIQMDFQMPERFDLTYKDSDGNERRPVMIHRALYGSIERFFGIL 525

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE++ G  P WL+P+QA+V  ++    EYA+ I   L  + + +E D RNET++Y+IRE+
Sbjct: 526 IEHYAGAFPTWLAPVQAVVIPVSEKFSEYAKNIYQTLDENDIRVELDDRNETLSYRIREN 585

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            ++K+P +II G+KE    +I +R      T  + + D I  +  E
Sbjct: 586 QMRKVPYMIIVGEKEKESETISVRTREGKDTHGIKINDFIETVLNE 631


>gi|138896280|ref|YP_001126733.1| threonyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
 gi|134267793|gb|ABO67988.1| Threonyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
          Length = 649

 Score =  546 bits (1408), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 265/652 (40%), Positives = 420/652 (64%), Gaps = 20/652 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSI 59
           MP  I++TFPDG+ K FP   +  D+A SIS  L KKA+A  +NG+  DL  P++E G +
Sbjct: 1   MPDVIRITFPDGAKKEFPSGTSTEDIAASISPGLKKKAIAGKLNGRFVDLRTPLQEDGEL 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT + P +L ++RHS AH+MA+A++ ++  V++ +GP+IE+GFYYD D E   + D+L
Sbjct: 61  VIITQDMPEALDILRHSTAHLMAQAIKRLYDNVKLGVGPVIENGFYYDIDMEHKLTPDDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IE +M++I+  +   +++ +S ++A  L+E   +  K+E++  IP  E +++Y QGE+
Sbjct: 121 PKIEAEMRKIVKENLDVVRKEVSRDEAIRLYEKIGDHLKLELINDIPEGETISIYEQGEF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRG HV STG++K+ FKL+ ++GAYWRGD N  ML RIYGTA+  +++L  YL  LE
Sbjct: 181 FDLCRGVHVPSTGKIKE-FKLLSISGAYWRGDRNNKMLQRIYGTAFFKKEDLDHYLQLLE 239

Query: 240 ESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTP 297
           E+++RDHRKL +E++LF  ++  G G+  W  KG  I + +  Y+  ++I   Y+ + TP
Sbjct: 240 EAKERDHRKLGKELELFTTSQKVGQGLPLWLPKGATIRRLIERYIVDKEIALGYDHVYTP 299

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    L++ SGHWD Y+ NMF     D+         L+PMNCP H+ ++   L SYRE
Sbjct: 300 VLGSVELYKTSGHWDHYKENMFPPMEMDN-----EELVLRPMNCPHHMMIYKSKLHSYRE 354

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+ +E  ++ NLI+ +YKD
Sbjct: 355 LPIRIAELGTMHRYEMSGALTGLQRVRGMTLNDAHIFVRPDQIKDEFKRVVNLILEVYKD 414

Query: 418 FGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           FG ++   +LS R     EK    D +W+ A+ +++  +D +       ++     GE A
Sbjct: 415 FGLDEYSFRLSYRDPQDKEKYYDDDEMWEKAQRMLREAMDELG------LDYYEAEGEAA 468

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  ++ A+G+D    T+Q+DF LP RF+  Y+    +   PV+IHR V  ++ER
Sbjct: 469 FYGPKLDVQVRTALGKDETLSTVQLDFLLPERFDLTYIGEDGKPHRPVVIHRGVVSTMER 528

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETIN 592
           F+  +IE +KG  P WL+P+Q  V  ++S A ++YA E+   L+ +   +E D R+E I 
Sbjct: 529 FVAFLIEEYKGAFPTWLAPVQVEVIPVSSEAHLDYAYEVKQALQVNGFRVEVDERDEKIG 588

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           YKIRE  ++KIP +++ GDKEA+ER++ +RR+G   ++ V+L   I +L ++
Sbjct: 589 YKIREAQMQKIPYMLVVGDKEAAERAVNVRRYGEKESETVALDKFIAMLEED 640


>gi|295111615|emb|CBL28365.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Synergistetes
           bacterium SGP1]
          Length = 633

 Score =  546 bits (1408), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 272/628 (43%), Positives = 400/628 (63%), Gaps = 20/628 (3%)

Query: 23  GSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSCAHIM 81
            S+V E++   L KKA+A  ++G   DL+  +R G  +E +T  D   L V+RHSCAH+M
Sbjct: 21  ASEVLEALG--LQKKAIAAKLDGAAVDLNREIRAGGRVEPLTAADEEGLDVLRHSCAHLM 78

Query: 82  AEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYL 141
           A+A++ ++P     IGP I+DGFYYD D     +  +L  IE +M+++        ++ +
Sbjct: 79  AQAIERLYPGTHFGIGPCIKDGFYYDVDATGTITEQDLPAIEAEMRKLTGAAEKVEREEM 138

Query: 142 SHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLM 201
             E A + F+ + + YK E++  + A   V+LYRQG++ DLCRGPHV  T  ++ F KL+
Sbjct: 139 RREDALKFFKDRGDPYKEELISELEAP-TVSLYRQGDYVDLCRGPHVPDTSVIRNF-KLL 196

Query: 202 KVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED 261
            VAGAYWRG     ML+RIYGTA+ T  EL  YL  +EE++ RDHRKL RE+DLF + E+
Sbjct: 197 SVAGAYWRGSEKNKMLTRIYGTAFATPDELKAYLKRMEEAKLRDHRKLGRELDLFSLHEE 256

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           G G  F+H KG  +  TLI + RR+ ++  Y+E+ TPQ+LD+ LW +SGHWD YR NM+ 
Sbjct: 257 GPGFPFFHPKGMVVMNTLIDFWRREHVRRGYQEVRTPQILDRELWLRSGHWDHYRENMYF 316

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +       D + FA+KPMNCPG + ++   L SYRELP+R+ E G V+R+E SG LHGL
Sbjct: 317 TEI------DEKPFAIKPMNCPGGILIYKTQLHSYRELPMRIGELGVVHRHERSGVLHGL 370

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD-FGFEKIMVKLSTRPEKRVGSDA 439
           MRVR FTQDDAH++C   Q+  E + I +L   +Y D FGF K  V+LST+PE  +GS  
Sbjct: 371 MRVRCFTQDDAHLYCEPSQIQQEVMGIMDLCRYVYSDVFGF-KYAVELSTKPENAMGSTE 429

Query: 440 LWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVD 499
            W+ AEN ++  L+  ++++  R+N G    +GAFYGPK ++ L+D IGR WQCGTIQ+D
Sbjct: 430 QWEAAENGLRAALE--QSNTPYRVNEG----DGAFYGPKIDFHLEDCIGRTWQCGTIQLD 483

Query: 500 FNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTT 559
           F +P RF+  Y+    ++  PVM+HR + GS+ERF+GI+IE++ G  P W++P+QA +  
Sbjct: 484 FQMPERFDMHYIAEDGKEHRPVMLHRTILGSLERFMGILIEHYAGAFPYWIAPVQAELIP 543

Query: 560 ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSI 619
           I+ +   YA+E+   L S  +  ETD R+E +  +IR+  ++K+P +I+ GDKE  ER +
Sbjct: 544 ISEAHRAYAEELRKELMSWGVRTETDSRDEKLGKRIRDAQLQKVPYMIVIGDKERDERQV 603

Query: 620 GIRRFGSTTTQKVSLLDAIPILTKESLP 647
            +R         +SL     +L+ E  P
Sbjct: 604 AVRERTKGDLGSMSLEAFQKLLSAEFNP 631


>gi|294501489|ref|YP_003565189.1| threonyl-tRNA synthetase [Bacillus megaterium QM B1551]
 gi|294351426|gb|ADE71755.1| threonyl-tRNA synthetase [Bacillus megaterium QM B1551]
          Length = 645

 Score =  546 bits (1408), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 265/644 (41%), Positives = 429/644 (66%), Gaps = 22/644 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M   IK+TFPDG++K +   ++  D+A SIS  L KKA+A  +NG++ DL  P+ ++GS+
Sbjct: 1   MSEVIKMTFPDGAVKEYSKGSSTEDIAASISPGLKKKALAGKVNGELLDLRTPIEQDGSL 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE--VQVAIGPIIEDGFYYDFDKEQPFSSD 117
           EIIT + P +L ++RHS AH+MA+A++ ++ +  VQ+ +GP+IE+GFYYD D E+  + +
Sbjct: 61  EIITQDAPEALEIMRHSTAHLMAQAIKRLYKDTKVQLGVGPVIENGFYYDIDMEESITPE 120

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +L +IEK+M++I+  +    ++ +S E+A +LF+   +  K+E++++IPA E VT+Y+QG
Sbjct: 121 DLGKIEKEMKKIVNSNIEIERKEVSREEAIQLFKEVGDELKLELIDAIPAGEKVTIYQQG 180

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           E+FDLCRG HV STG++K+ FKL+ VAGAYWRGDS+  ML RIYGTA+ T+ +L ++L  
Sbjct: 181 EFFDLCRGVHVPSTGKIKE-FKLLSVAGAYWRGDSDNQMLQRIYGTAFFTKADLDEHLRL 239

Query: 238 LEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEIN 295
           LEE+++RDHRKL +E++LF  ++  G G+  W  KG  I + +  Y+  +++   Y+ + 
Sbjct: 240 LEEAKERDHRKLGKELNLFTNSQKVGQGLPLWLPKGATIRRIIERYIVDKEVSLGYQHVY 299

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP +    L++ SGHW+ Y+ +MF     D+  +DL    L+PMNCP H+ V+  G+ SY
Sbjct: 300 TPVLGSVELYKTSGHWEHYQDDMFPAMEMDN--EDL---VLRPMNCPHHMMVYKQGIHSY 354

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+  E +++  L+ ++Y
Sbjct: 355 RELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEEFIRVVRLVEAVY 414

Query: 416 KDFGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
           KDFGFE    +LS R     EK    DA+W+ A++++K  +D +       ++     GE
Sbjct: 415 KDFGFENYSFRLSYRDPADTEKYFDDDAMWEKAQSMLKDAMDELD------LDYYEAEGE 468

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
            AFYGPK +  +K A+G++    T+Q+DF LP RF+  Y+    ++  PV+IHR V  ++
Sbjct: 469 AAFYGPKLDVQVKTALGKEETLSTVQLDFLLPERFDLTYIGEDGKQHRPVVIHRGVVSTM 528

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNET 590
           ERF+  +IE +KG  P WL+P+Q  V  ++ +  +EYA+E+   L+   + +E D R+E 
Sbjct: 529 ERFVAFLIEEYKGAFPTWLAPVQVQVIPVSPTVHLEYAKEVQEQLQLAGIRVELDSRDEK 588

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           I YKIRE  ++KIP +++ GDKE  ++++ +R++G   ++ V  
Sbjct: 589 IGYKIREAQMQKIPYMLVVGDKEVEDKAVNVRKYGEQNSETVGF 632


>gi|315659856|ref|ZP_07912715.1| threonine--tRNA ligase [Staphylococcus lugdunensis M23590]
 gi|315495144|gb|EFU83480.1| threonine--tRNA ligase [Staphylococcus lugdunensis M23590]
          Length = 638

 Score =  546 bits (1408), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 266/642 (41%), Positives = 414/642 (64%), Gaps = 19/642 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           I + FPDGS K +       DVA+SIS SL K AV   +NG + DL+ P++E   +   T
Sbjct: 6   INIQFPDGSQKAYEQGVLARDVAKSISTSLFKAAVVCRVNGTLVDLTYPLQEDCELTFYT 65

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            ED   +  +RH+ AH++A+A+  ++P+V + IGP+I++GFYYD D ++  S  +L +IE
Sbjct: 66  LEDAEGIEAMRHTAAHVLAQALTRLYPQVLLTIGPVIDNGFYYDIDLDESISEVDLNKIE 125

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M++I + +   +K+ +S+++A+ LF  K   YK+EI+E     E +++YRQGE+ DLC
Sbjct: 126 KEMKKIQSENLDIVKENVSYDEAKALF--KDNPYKLEIIEQYQG-EQLSVYRQGEFLDLC 182

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPHV +T  VK   KL KV+GAYWRGDS+  ML RIYG A+ +Q +L  Y  FL E+E 
Sbjct: 183 VGPHVPNTKFVKHV-KLTKVSGAYWRGDSDNKMLQRIYGVAFQSQAQLDDYFEFLREAEA 241

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           R+HRKL +++ LF  +E+  G+ F+   G  +   + +++R  ++K+DY+E+ TP +++Q
Sbjct: 242 RNHRKLGKQLKLFMFSEEAPGMPFYLSNGQFVRNQMENFLREIQLKNDYDEVRTPLMMNQ 301

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y  NM+  K       D   +ALKPMNCPGH+ +F + L+SY++LP+R+
Sbjct: 302 KLWEESGHWDHYHENMYFTKV------DENDYALKPMNCPGHMLIFKNELRSYKDLPLRM 355

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFG V+R+E SG+L+GL+RVR F QDDAH+F  K Q+ +E   I  LI  IY  FGF  
Sbjct: 356 AEFGQVHRHEFSGALNGLLRVRTFCQDDAHIFIMKSQIKSEVEDILKLIDYIYSVFGF-T 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             ++LSTRPE  +G   LW++AE  +  VLD +       +   +  G+GAFYGPK +  
Sbjct: 415 YSIELSTRPEDYLGELKLWNEAEQSLANVLDELG------LKYTINEGDGAFYGPKIDVH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+ R  QC T+Q+DF +P +F+  Y+N  +EK  PV++HRA+FGS++RF GI+IE+F
Sbjct: 469 IKDALNRSHQCATVQLDFQMPEKFDLTYINEQNEKERPVVLHRAIFGSLDRFFGILIEHF 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
           KG  PLW++P+Q  +  ++ +   Y  ++   L+++++ +  D R+E +  KIRE  +KK
Sbjct: 529 KGAFPLWMAPVQVNIIGVSDNNTAYVNKVFEALQNNNIRVVIDDRDEKLGKKIRESQMKK 588

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IP  ++ GD E     +  R++     + + + + I  L +E
Sbjct: 589 IPYTLVLGDHEQENNVVSARKYSHEDNEVMDIQNFIAQLQEE 630


>gi|1565235|emb|CAB02510.1| Threonyl tRNA Synthetase [Bacillus subtilis subsp. subtilis str.
           168]
          Length = 601

 Score =  546 bits (1408), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 267/597 (44%), Positives = 398/597 (66%), Gaps = 16/597 (2%)

Query: 38  AVAVAINGKVCDLSDPVRE-GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAI 96
           A A  +NGK+ DLS  + E   + I+T +    L V+RH+ AH++A+AV+ ++ EV + +
Sbjct: 1   AAAGQVNGKLVDLSFKLEEDAELSIVTLDSQEGLQVLRHTTAHVLAQAVKRLYGEVSLGV 60

Query: 97  GPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEA 156
           GP+I DGFYYD    +  +S +L  IEK+M+ II  +    +  +S+E+A ELF  K E 
Sbjct: 61  GPVILDGFYYDMKLGKSLASGDLEAIEKEMKNIINENLEIKRIEVSYEEAEELFAQKDER 120

Query: 157 YKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPM 216
            K+EIL+ IP  E++TLY+QGE+ DLCRGPH+ STG +K F KL +V+GAYWRGDS   +
Sbjct: 121 LKLEILKDIPRGEDITLYQQGEFVDLCRGPHLPSTGMIKAF-KLTRVSGAYWRGDSKNEV 179

Query: 217 LSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIF 276
           L R+YG A+  +++L  +L+ LEE+ KRDHRKL +++ LF  +E+  G+ F+  KG  + 
Sbjct: 180 LQRVYGVAFQKKKDLDAHLHMLEEAAKRDHRKLGKQLGLFMFSEEAPGMPFYLPKGQIVR 239

Query: 277 QTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFA 335
             L  + R  +    Y+E+ TP +++Q LW+QSGHWD YR NM+  +  DDT      FA
Sbjct: 240 NELERFSRELQTNAGYDEVRTPFMMNQRLWEQSGHWDHYRDNMYFSEV-DDT-----RFA 293

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC 395
           +KPMNCPGH+ +F + L SYR+LP+R+AEFG V+R+E SG+L+G++RVR F QDDAH+F 
Sbjct: 294 MKPMNCPGHMLIFKNSLYSYRDLPIRMAEFGQVHRHEYSGALNGMLRVRTFCQDDAHIFV 353

Query: 396 TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTI 455
            ++Q+ +E  +   LI  +Y+ FGFE   V+LSTRPE  +G D+LW+ +E  +  VL+ +
Sbjct: 354 REDQIESEIKEAIRLIDEVYRTFGFE-YSVELSTRPEDSLGDDSLWEASERALARVLEEL 412

Query: 456 KNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS 515
             S +  IN G    +GAFYGPK ++ +KDA+ R  QC TIQ+DF +P +F+  Y+N  +
Sbjct: 413 GLSYE--INEG----DGAFYGPKIDFHIKDALKRSHQCATIQLDFQMPEKFDLTYINELN 466

Query: 516 EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLL 575
           EK  PV+IHRAVFGSI+RF GI+IE++ G  P+WL+PIQ  +  ++   ++Y +++   L
Sbjct: 467 EKVRPVVIHRAVFGSIDRFFGILIEHYGGAFPVWLAPIQVQIIPVSHVHLDYCRKVQAEL 526

Query: 576 KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
           K   +    D RNE + YKIRE  ++KIP +++ GD E  E ++ +RRFG    + V
Sbjct: 527 KQAGIRAGIDERNEKLGYKIRESQVQKIPYVLVLGDHEEQENAVNVRRFGHQQNEHV 583


>gi|304403794|ref|ZP_07385456.1| threonyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
 gi|304346772|gb|EFM12604.1| threonyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
          Length = 637

 Score =  546 bits (1408), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 270/625 (43%), Positives = 410/625 (65%), Gaps = 20/625 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEII 62
           +I +T PDG+I+ +    T  +VA S+  +L K AVA  ++ ++ DL+ P+ + S +E++
Sbjct: 2   EINVTLPDGAIRRYTQGTTVGEVALSLHANLYKNAVAGKLDNELVDLNRPIEQDSAVELV 61

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPE--VQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           T +      + RHS AH+MA+A++ ++P   V++ IGP+IEDGFYYD D  +P SS++L 
Sbjct: 62  TLDSQLGRDIHRHSTAHVMAQAIKRLFPNQSVKLGIGPVIEDGFYYDIDIAKPLSSEDLV 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IE +M  II  + P +++ +S E+A + FE  +E  K+E++  +PA   +T+Y QGE+ 
Sbjct: 122 AIEYEMNHIIGENLPIVRRAVSREEAVQTFEECEEPLKLELIRDLPADAVITIYEQGEFS 181

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ STG++K F KL+ VAGAYWRGDSN  +L RIYGTA+  + +L ++L+ +EE
Sbjct: 182 DLCRGPHLPSTGRIKAF-KLLHVAGAYWRGDSNNKVLQRIYGTAFPKKAQLDEHLHRIEE 240

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR--RKIKDDYEEINTPQ 298
           ++KRDHRKL +E+ LF  +E+  G+ F+  KG  I   L S+ R  ++++  Y E+ TP 
Sbjct: 241 AKKRDHRKLGKELGLFMFSEEAPGMPFYLPKGMAIRNELESFAREIQRLRA-YAEVRTPL 299

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +++  +W+QSGHWD Y+ NM+  +       D   FALKPMNCPGH+ ++ +   SYREL
Sbjct: 300 MMNNRIWEQSGHWDHYKDNMYFTQV------DETKFALKPMNCPGHMLIYKNSRHSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RL+EFG V+R+E SG+L G+MRVR F QDDAH+F    Q+  E   +  LI  IY  F
Sbjct: 354 PIRLSEFGQVHRHEFSGALSGMMRVRTFCQDDAHLFVLPSQIEEEIGLVIELIGHIYDVF 413

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF    ++LSTRP+  +G++ALWD AE  ++ VLD         I   +  G+GAFYGPK
Sbjct: 414 GF-AYKIELSTRPDDYMGAEALWDQAEQSLQSVLDA------RGIAYTINEGDGAFYGPK 466

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++ + DA+ R WQCGTIQ+DF +P +F+  Y+   + K  PV+IHRAV+GSI+RFIGI+
Sbjct: 467 IDFHILDALQRSWQCGTIQLDFQMPEKFDLTYIGEDNLKHRPVVIHRAVYGSIDRFIGIL 526

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
            E++ G  PLWL+P+QA +  ++   ++ A  +   L+   +  E D RNE + YKIRE 
Sbjct: 527 TEHYAGAFPLWLAPVQAKLLPVSDQYLDDAYAVKKQLEEAGIRAEVDDRNEKLGYKIREA 586

Query: 599 SIKKIPIIIICGDKEASERSIGIRR 623
            ++K P ++I G+ E    S+ +R+
Sbjct: 587 QLEKTPYMLILGENERGSGSVSVRK 611


>gi|261418266|ref|YP_003251948.1| threonyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|319767774|ref|YP_004133275.1| threonyl-tRNA synthetase [Geobacillus sp. Y412MC52]
 gi|261374723|gb|ACX77466.1| threonyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|317112640|gb|ADU95132.1| threonyl-tRNA synthetase [Geobacillus sp. Y412MC52]
          Length = 652

 Score =  546 bits (1407), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 266/650 (40%), Positives = 416/650 (64%), Gaps = 20/650 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSI 59
           MP  I++TFPDG+ K FP   T  DVA SIS  L KKA+A  +NG+  DL  P+ E G +
Sbjct: 1   MPDVIRITFPDGAEKEFPKGTTTEDVAASISPGLKKKAIAGKLNGRFVDLRTPLHEDGEL 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT + P +L ++RHS AH+MA+A++ ++  V++ +GP+IE+GFYYD D E   + D+L
Sbjct: 61  VIITQDMPEALDILRHSTAHLMAQAIKRLYGNVKLGVGPVIENGFYYDIDMEHKLTPDDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IE +M++I+  +   +++ +S E+A  L+E   +  K+E++  IP  E +++Y QGE+
Sbjct: 121 PKIEAEMRKIVKENLDIVRKEVSREEAIRLYEEIGDELKLELIADIPEGEPISIYEQGEF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRG HV STG++K+ FKL+ ++GAYWRGDSN  ML RIYGTA+  +++L +YL  LE
Sbjct: 181 FDLCRGVHVPSTGKIKE-FKLLSISGAYWRGDSNNKMLQRIYGTAFFKKEDLDRYLRLLE 239

Query: 240 ESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTP 297
           E+++RDHRKL +E++LF  ++  G G+  W  KG  I + +  Y+  +++   Y+ + TP
Sbjct: 240 EAKERDHRKLGKELELFTTSQQVGQGLPLWLPKGATIRRIIERYIVDKEVALGYDHVYTP 299

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    L++ SGHWD Y+ NMF     D+         L+PMNCP H+ ++   L SYRE
Sbjct: 300 VLGSVELYKTSGHWDHYKENMFPPMEMDN-----EELVLRPMNCPHHMMIYKSKLHSYRE 354

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+ +E  ++ NLI+ +YKD
Sbjct: 355 LPIRIAELGTMHRYEMSGALTGLQRVRGMTLNDAHIFVRPDQIKDEFKRVVNLILEVYKD 414

Query: 418 FGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           FG E+   +LS R     EK    D +W+ A+ +++  +D +       ++     GE A
Sbjct: 415 FGIEEYSFRLSYRDPHDKEKYYDDDEMWEKAQRMLREAMDELG------LDYYEAEGEAA 468

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  ++ A+G+D    T+Q+DF LP RF+  Y+    +   PV+IHR V  ++ER
Sbjct: 469 FYGPKLDVQVRTALGKDETLSTVQLDFLLPERFDLTYIGEDGKPHRPVVIHRGVVSTMER 528

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETIN 592
           F+  +IE +KG  P WL+P+Q  V  ++  A ++YA ++   LK     +E D R+E I 
Sbjct: 529 FVAFLIEEYKGAFPTWLAPVQVKVIPVSPEAHLDYAYDVQRTLKERGFRVEVDERDEKIG 588

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           YKIRE  ++KIP +++ GDKE SER++ +RR+G   ++ + L + + +L 
Sbjct: 589 YKIREAQMQKIPYMLVVGDKEVSERAVNVRRYGEKESRTMGLDEFMALLA 638


>gi|329927796|ref|ZP_08281857.1| threonine--tRNA ligase [Paenibacillus sp. HGF5]
 gi|328938197|gb|EGG34592.1| threonine--tRNA ligase [Paenibacillus sp. HGF5]
          Length = 636

 Score =  546 bits (1406), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 273/644 (42%), Positives = 416/644 (64%), Gaps = 20/644 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           I +T  DGS K +P   T   +AESI   L K AVA  ++GK+ DL+  +RE   + IIT
Sbjct: 3   IVVTLQDGSKKEYPAQTTMIQIAESIHSGLKKNAVAAKVDGKLVDLNHELREDAEVSIIT 62

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIW--PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
            +    L V RHS AH+MA+AV+ ++    V + +GP+IEDGFYYD D     ++D+L  
Sbjct: 63  LDSEDGLYVYRHSTAHLMAQAVKRLYGSESVHLGVGPVIEDGFYYDMDLGHSITADDLIA 122

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE++M +I+  D P L++ +  ++A  +F+   + YK E++  +P  E +++Y QGE+ D
Sbjct: 123 IEREMLKIVQEDLPILRKEVGRKEAERIFQD--DPYKTELIRELPEDEVISVYEQGEFVD 180

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ STG++K F KLM VAGAYWRG+S+  ML RIYGTA+  + +L ++L  LEE+
Sbjct: 181 LCRGPHLPSTGRIKAF-KLMSVAGAYWRGNSDNKMLQRIYGTAFPKKSQLDEHLLLLEEA 239

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           +KRDHRKL +E+ LF  +E+  G+ F+   G  I   L  + R  +   DY+E+ TP ++
Sbjct: 240 KKRDHRKLGKELGLFMFSEEAPGMPFFLPNGMIIRNELEQFARGLQFHRDYDEVRTPLMM 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ LW+ SGHWD Y+ NM+  +       D   +ALKPMNCPGH+ V+ + L SYRELP+
Sbjct: 300 NKRLWEMSGHWDHYKDNMYFTQV------DETEYALKPMNCPGHMLVYKNSLHSYRELPI 353

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R++EFG V+R+E SG+L+G+MRVR F QDDAH+F   +Q+  E  ++ + I  +Y+ FGF
Sbjct: 354 RISEFGQVHRHEFSGALNGMMRVRTFCQDDAHIFVRPDQIQEEIKQVIDFISQVYQVFGF 413

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           E   ++LSTRPE  +GS+ LW+ AE+ ++ VLD +      RIN G    +GAFYGPK +
Sbjct: 414 E-YTIELSTRPEDSMGSEELWEQAESSLQQVLDQMGLPY--RINEG----DGAFYGPKID 466

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           + + D++ R WQCGTIQ+DF  P +F+  Y+   ++K  PV+IHRAVFGSIERFIGI+ E
Sbjct: 467 FHILDSLKRSWQCGTIQLDFQFPEKFDLSYIGEDNQKHRPVVIHRAVFGSIERFIGILTE 526

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           ++ G  P+WL+P+Q ++  ++   ++Y+ ++   L++  + +  D RNE + YKIRE  +
Sbjct: 527 HYGGAFPMWLAPVQVMIIPVSDHYIDYSLKVKKRLENAGIRVNVDVRNEKLGYKIREAGL 586

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            K P  ++ G+KE     + +R+ G     ++++   I  L  E
Sbjct: 587 LKTPYTLVLGEKEMDSDHVSVRKRGEGELGEIAIDQVIERLRNE 630


>gi|332295956|ref|YP_004437879.1| threonyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
 gi|332179059|gb|AEE14748.1| threonyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
          Length = 606

 Score =  546 bits (1406), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 277/610 (45%), Positives = 400/610 (65%), Gaps = 21/610 (3%)

Query: 44  NGKVCDLSDPVREG-SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIED 102
           N K+ D  D  REG S++ +T +D  SL V+RHS AH++A+AV+ ++PE ++AIGP IE+
Sbjct: 10  NDKLVDFRD-YREGESLKPVTDKDKESLDVLRHSAAHLLAQAVKELFPETKLAIGPSIEN 68

Query: 103 GFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL 162
           GFYYD  +++PF+ ++L  IEKKM+EI  RD    K  L  E A +LF   KE YK+E++
Sbjct: 69  GFYYDIYRKEPFTPEDLEIIEKKMKEIAQRDLEITKMCLKKEDAIKLFSDLKEDYKLELI 128

Query: 163 ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYG 222
           + IP  ++V +Y+QG + DLCRGPH+ STGQ+K F KL+ VAGAYWRGD  R ML RIYG
Sbjct: 129 KDIP-DDDVCIYKQGNFIDLCRGPHLSSTGQIKHF-KLLNVAGAYWRGDEKREMLQRIYG 186

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLIS 281
           TA+ T+++L  +L +LEE  KRDHRKL +E+DL+ +A++ G+G+I WH  G  I   +  
Sbjct: 187 TAFWTEEDLKNHLNWLEEVYKRDHRKLGKELDLYSMADEVGAGLILWHPNGGVIRTIIED 246

Query: 282 YMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
           Y+R++ +K  YE + TP +++  +W+ SGH+D Y+ NM+  +       D + +A+KPMN
Sbjct: 247 YLRKEHVKRGYEIVYTPHMMNLKIWKISGHFDFYKENMYIFE------NDGQEYAVKPMN 300

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
           CPGH+ ++N   +SYR+LP+R  E G+VYR E SG+LHGL+RVRGFTQDDAH+FCT EQ+
Sbjct: 301 CPGHMMIYNSKTRSYRDLPIRFFELGTVYRFERSGALHGLLRVRGFTQDDAHIFCTNEQL 360

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQ 460
            +E + + N    + + FGF K +V + TRP+  +G+D  W+ A N +   L       Q
Sbjct: 361 QDEIIGVLNFAKDMMELFGF-KYVVSVGTRPDGSIGTDEQWNLATNSLISAL------KQ 413

Query: 461 DRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHP 520
             I   ++ G+GAFYGPK +  L DA+GR W   TIQVDF LP RFN  Y +    K  P
Sbjct: 414 KNIEFEIIDGDGAFYGPKIQVELIDALGRKWTGPTIQVDFALPERFNLEYADKDGTKKRP 473

Query: 521 VMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT--SSAVEYAQEIANLLKSH 578
           VMIHR V GS+ERF+G +IEN+ G  P WLSPIQ I+  +   S  +EY+ E+   L   
Sbjct: 474 VMIHRTVVGSMERFLGALIENYAGVFPAWLSPIQIIIIPVKEDSELLEYSSEVEKKLSKE 533

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
              ++ D RNET+ Y+IR+  + +IP I++ G KE  E+ I +R  G     ++S+ + +
Sbjct: 534 DYRVKVDKRNETLKYRIRDAELNRIPYILVIGKKELDEKLISLRTRGMKDEGQMSIEEFL 593

Query: 639 PILTKESLPP 648
             L+ E+  P
Sbjct: 594 KRLSLEARIP 603


>gi|56421254|ref|YP_148572.1| threonyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
 gi|297529120|ref|YP_003670395.1| threonyl-tRNA synthetase [Geobacillus sp. C56-T3]
 gi|73919792|sp|Q5KWD2|SYT_GEOKA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|56381096|dbj|BAD77004.1| threonyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
 gi|297252372|gb|ADI25818.1| threonyl-tRNA synthetase [Geobacillus sp. C56-T3]
          Length = 652

 Score =  545 bits (1405), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 265/650 (40%), Positives = 416/650 (64%), Gaps = 20/650 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSI 59
           MP  I++TFPDG+ K FP   T  D+A SIS  L KKA+A  +NG+  DL  P+ E G +
Sbjct: 1   MPDVIRITFPDGAEKEFPKGTTTEDIAASISPGLKKKAIAGKLNGRFVDLRTPLHEDGEL 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT + P +L ++RHS AH+MA+A++ ++  V++ +GP+IE+GFYYD D E   + D+L
Sbjct: 61  VIITQDMPEALDILRHSTAHLMAQAIKRLYGNVKLGVGPVIENGFYYDIDMEHKLTPDDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IE +M++I+  +   +++ +S E+A  L+E   +  K+E++  IP  E +++Y QGE+
Sbjct: 121 PKIEAEMRKIVKENLDIVRKEVSREEAIRLYEEIGDELKLELIADIPEGEPISIYEQGEF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRG HV STG++K+ FKL+ ++GAYWRGDSN  ML RIYGTA+  +++L +YL  LE
Sbjct: 181 FDLCRGVHVPSTGKIKE-FKLLSISGAYWRGDSNNKMLQRIYGTAFFKKEDLDRYLRLLE 239

Query: 240 ESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTP 297
           E+++RDHRKL +E++LF  ++  G G+  W  KG  I + +  Y+  +++   Y+ + TP
Sbjct: 240 EAKERDHRKLGKELELFTTSQQVGQGLPLWLPKGATIRRIIERYIVDKEVALGYDHVYTP 299

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    L++ SGHWD Y+ NMF     D+         L+PMNCP H+ ++   L SYRE
Sbjct: 300 VLGSVELYKTSGHWDHYKENMFPPMEMDN-----EELVLRPMNCPHHMMIYKSKLHSYRE 354

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+ +E  ++ NLI+ +YKD
Sbjct: 355 LPIRIAELGTMHRYEMSGALTGLQRVRGMTLNDAHIFVRPDQIKDEFKRVVNLILEVYKD 414

Query: 418 FGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           FG E+   +LS R     EK    D +W+ A+ +++  +D +       ++     GE A
Sbjct: 415 FGIEEYSFRLSYRDPHDKEKYYDDDEMWEKAQRMLREAMDELG------LDYYEAEGEAA 468

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  ++ A+G+D    T+Q+DF LP RF+  Y+    +   PV+IHR V  ++ER
Sbjct: 469 FYGPKLDVQVRTALGKDETLSTVQLDFLLPERFDLTYIGEDGKPHRPVVIHRGVVSTMER 528

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETIN 592
           F+  +IE +KG  P WL+P+Q  V  ++  A ++YA ++   LK     +E D R+E I 
Sbjct: 529 FVAFLIEEYKGAFPTWLAPVQVKVIPVSPEAHLDYAYDVQRTLKERGFRVEVDERDEKIG 588

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           YKIRE  ++KIP +++ GDKE SER++ +RR+G   ++ + L + + +L 
Sbjct: 589 YKIREAQMQKIPYMLVVGDKEVSERAVNVRRYGEKESRTMGLDEFMALLA 638


>gi|306820889|ref|ZP_07454509.1| threonine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
 gi|304551003|gb|EFM38974.1| threonine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
          Length = 641

 Score =  545 bits (1405), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 268/610 (43%), Positives = 391/610 (64%), Gaps = 16/610 (2%)

Query: 15  KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVI 73
           +N+       DVA+ IS  LA+  V   INGKVCDL  P+ +   IE +   D     V 
Sbjct: 12  RNYEKGILALDVAKDISEGLARSVVGAKINGKVCDLMTPLTDDCDIEFLKFADKDGKMVF 71

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
            H+  HIMA+AV+ ++P  ++  GP +++GFYYD D E+  + ++L +IEK+M+ I++  
Sbjct: 72  WHTSTHIMAQAVKRLYPNAKLGTGPALDNGFYYDIDLEEKLTVEDLEKIEKEMKNIVSES 131

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQ 193
              +++ +S  +A E+ +++ E YK+EI+  +P    ++LY+QGE+ DLC GPH+ +T  
Sbjct: 132 LDIVRKEVSRNEAIEIMKNRNEDYKIEIINGLPEDATISLYQQGEFIDLCAGPHLPNTKY 191

Query: 194 VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREM 253
           VK F KL  +AGAYWR D+N   L R+YG ++  ++EL +YL  LEE++ RDHRKL +E+
Sbjct: 192 VKAF-KLTSIAGAYWRADANNKQLQRLYGISFEKKRELDEYLKLLEEAKLRDHRKLGKEL 250

Query: 254 DLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWD 312
           DLF + E+G G  F+H KG  +  TL  + R +  K  Y+EI TP +L++ LW QSGHWD
Sbjct: 251 DLFSMHEEGPGFPFFHPKGMVLRNTLEKFWREEHEKAGYDEIKTPIILNEALWHQSGHWD 310

Query: 313 SYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE 372
            Y+ NM+  K       D   +A+KPMNCPG +  +   L SYR+LP+R AE G V+R+E
Sbjct: 311 HYKENMYFTKI------DGEDYAIKPMNCPGSILTYKTHLFSYRDLPLRWAEMGQVHRHE 364

Query: 373 PSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
            SG+LHGLMRVR FTQDDAH++    Q+ +E + +  L   IY  F F K  V+LSTRPE
Sbjct: 365 LSGALHGLMRVRTFTQDDAHLYVLPSQVKDELIGVIELADYIYSIFNF-KYHVELSTRPE 423

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
             +G+   WD A N +   L+      +  I   V  G+GAFYGPK ++ L+DAIGR WQ
Sbjct: 424 NSMGTQEQWDIATNGLIAALE------EKNIKYIVNEGDGAFYGPKIDFHLQDAIGRTWQ 477

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
           CGTIQ+DF +P RF+  Y++S++EK  PVM+HR VFGSIERFIGI+IE+F G  PLWLSP
Sbjct: 478 CGTIQLDFQMPERFDIHYIDSNNEKQRPVMLHRTVFGSIERFIGILIEHFAGKFPLWLSP 537

Query: 553 IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
           +Q  +  I+   ++YA E+ + LK   + +  D R E I +KIRE  ++K+P +++ G+K
Sbjct: 538 VQVKILPISDKFIDYAYEVQSELKKLGIRVNVDARAEKIGFKIREAQLEKVPYMLVIGEK 597

Query: 613 EASERSIGIR 622
           E    ++ +R
Sbjct: 598 EVENNTLSVR 607


>gi|183221772|ref|YP_001839768.1| threonyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
 gi|189911846|ref|YP_001963401.1| threonyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167776522|gb|ABZ94823.1| Threonine--tRNA ligase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167780194|gb|ABZ98492.1| Threonyl-tRNA synthetase (Threonine--tRNA ligase; ThrRS)
           [Leptospira biflexa serovar Patoc strain 'Patoc 1
           (Paris)']
          Length = 638

 Score =  545 bits (1405), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 277/647 (42%), Positives = 406/647 (62%), Gaps = 21/647 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAI-NGKVCDLS-DPVREGSIEII 62
           + +T PDGS K      + SD  ++    L +KA+AV + +G+  DLS  P    +++ +
Sbjct: 4   LTITLPDGSSKELESGKSFSDFVQNQLPFLKEKALAVVLSDGRTVDLSFVPTENTTVKFL 63

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG---FYYDFD-KEQPFSSDE 118
           T +D     V  HS AH++  AVQ +WPE ++ +GP+IE+G   F+YD D  +   + D+
Sbjct: 64  TFDDKEGKEVFHHSSAHLLGMAVQRLWPEARLTVGPVIENGPGFFFYDIDFGDLVITVDD 123

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L +IE +M +I+  D    +  LS E+A E F+ + E YKVE+++   A  +V+LY QGE
Sbjct: 124 LPKIEAEMAKIVKEDLTVKRWELSKEEAIEKFKKENEPYKVELIQGFDAA-SVSLYGQGE 182

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           W+DLCRGPHV  TGQ+K F KL  ++GAYW+GDS    L+RIYG ++ T++ L +Y++ +
Sbjct: 183 WYDLCRGPHVARTGQLKAF-KLTAISGAYWKGDSKNKQLTRIYGVSFPTKKLLDEYIFLI 241

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTP 297
           EE++KRDHRKL +E+DLF   ++  G  FWH KG  ++ TL SY+R +  +  Y+EI TP
Sbjct: 242 EEAKKRDHRKLGKELDLFSFQDEAPGFPFWHPKGTVLWNTLASYIREECFRRGYQEIKTP 301

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +L+  LW++SGHWD+++ NM+          D   FA+KPMNCPG   ++ + + SYRE
Sbjct: 302 AILNSSLWKKSGHWDNFKENMYFTDI------DESEFAVKPMNCPGCCLIYKYHMHSYRE 355

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R  E G+V+R+E SG LHGL RVR FTQDDAH++   +++ +E   I +    +YK 
Sbjct: 356 LPLRFMELGNVHRHEMSGVLHGLFRVRAFTQDDAHIYAPLDKVESEVEDIIDFTFDVYKK 415

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF +    ++TRPEK  GSD  W+ A   +    D +K      I  G+  G+GAFYGP
Sbjct: 416 FGFTEFKTFIATRPEKSQGSDEDWNLATQALH---DALKKKG---IEYGIKEGDGAFYGP 469

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ +KD++GR WQCGT+Q+DF++P+RF   +  S  +K  PVMIHRA++GS+ERFIGI
Sbjct: 470 KIEFNIKDSLGRLWQCGTVQIDFSMPNRFELDFTASDGKKHAPVMIHRAIYGSLERFIGI 529

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE+F+G  PLWL+P Q  V T+  +  +YA+E+   L      +E D RNE I  KIR+
Sbjct: 530 LIEHFEGKFPLWLNPTQIRVLTVAETHSDYAKEVYQDLVMQGFRVELDVRNEKIGSKIRD 589

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
             +K+    +I GDKE    SI  RR G  TT  VS    + +L  E
Sbjct: 590 SIMKRSSYTLILGDKEKEAGSISYRRMGEETTATVSRDGFLSLLKGE 636


>gi|225568704|ref|ZP_03777729.1| hypothetical protein CLOHYLEM_04783 [Clostridium hylemonae DSM
           15053]
 gi|225162203|gb|EEG74822.1| hypothetical protein CLOHYLEM_04783 [Clostridium hylemonae DSM
           15053]
          Length = 583

 Score =  545 bits (1404), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 257/571 (45%), Positives = 386/571 (67%), Gaps = 15/571 (2%)

Query: 54  VREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQP 113
           +++GS++ +T  D       RH+ +HI+A+AV+ ++P+ ++AIGP ++DG+YYDF+   P
Sbjct: 5   MKDGSVQDLTFADEVGQEAFRHTTSHILAQAVKRLYPDTKLAIGPAVKDGYYYDFEFSFP 64

Query: 114 FSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTL 173
           F+++ LA++EK+M+ I+    P  +  +S E+A +L E + E+YKVE+++++P +E ++L
Sbjct: 65  FTTEHLAEVEKEMRRIVKESLPLERSVVSREEALKLMEERGESYKVEMIQALPKEEEISL 124

Query: 174 YRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQ 233
           YRQGE+ D C GPHV +T  +K F KL  VAGAYW GD N  ML+RIYGT++    EL  
Sbjct: 125 YRQGEFVDFCAGPHVSNTSVIKAF-KLQSVAGAYWHGDENNQMLTRIYGTSFPKADELDA 183

Query: 234 YLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYE 292
           YL  +EE+  RDHRKL +E+ LF I ++G G  F+  KG  +   LI Y R+  +++ Y 
Sbjct: 184 YLKRMEEARLRDHRKLGKELGLFAIMDEGPGFPFFLPKGMVLKNLLIDYWRQLHLREGYV 243

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           EI+TP +L +HLW+ SGHWD Y+ NM+       T+ D   +A+KPMNCPG + V+    
Sbjct: 244 EISTPIILSRHLWENSGHWDHYKDNMYT------TVIDEEDYAVKPMNCPGGMLVYKVEP 297

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
           +SY++LP+R+ E G V+R+E SG LHGLMRVR FTQDDAH+F T++Q+ +E   +  LI 
Sbjct: 298 RSYKDLPMRVGELGLVHRHEKSGQLHGLMRVRCFTQDDAHIFMTEDQIRDEIKGVARLID 357

Query: 413 SIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
            +Y  FGF K  V+LSTRPE  +GSDA W+ A   ++G L+ +       ++  V  G+G
Sbjct: 358 EVYSKFGF-KYHVELSTRPENSMGSDADWEMATEGLRGALEELG------MDYVVNEGDG 410

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           AFYGPK ++ L+D+IGR WQCGTIQ+DF +P RF   Y  +  EK  P+MIHR  FGSIE
Sbjct: 411 AFYGPKIDFHLEDSIGRTWQCGTIQLDFQMPQRFELEYTGADGEKHRPIMIHRVAFGSIE 470

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
           RFIGI+IE++ G  P WL+P+Q  +  ++    +YAQ++ + LK+  + +E D R+E + 
Sbjct: 471 RFIGILIEHYAGKFPTWLAPVQVKILPVSDKFADYAQKVTDELKAAGIRVELDGRSEKLG 530

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRR 623
           YKIRE  ++K+P +II G+KE +E  + +R+
Sbjct: 531 YKIREAQMQKVPYMIIVGEKEVAENVVSVRK 561


>gi|166032032|ref|ZP_02234861.1| hypothetical protein DORFOR_01734 [Dorea formicigenerans ATCC
           27755]
 gi|166028485|gb|EDR47242.1| hypothetical protein DORFOR_01734 [Dorea formicigenerans ATCC
           27755]
          Length = 643

 Score =  545 bits (1404), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 272/630 (43%), Positives = 399/630 (63%), Gaps = 17/630 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           +K+T  DGS+K +    +  D+A+ +S  LA+ A +  +NG++ DL   V   S +EI+T
Sbjct: 1   MKITLKDGSVKEYEHSMSVIDIAKDLSEGLARVATSGRVNGELVDLRTVVDSDSEVEILT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            ++        H+ +HIMA+A++ ++PE ++AIGP IE+GFYYD D+E PF +++L +IE
Sbjct: 61  FDNEEGKGAFFHTTSHIMAQAIKRLYPETKLAIGPSIENGFYYDLDRETPFVAEDLEKIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M++I+  D    +     ++A   F+ K E YKVE++E +P    ++ Y+QGE+ DLC
Sbjct: 121 KEMKKIVKEDLEITRFTKPRDEAIAYFKEKDEPYKVELIEDLPEDAEISFYQQGEFVDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+ +T  VK   KL  +AGAYWRG+    ML+RIYG ++  + +L +YL  LEE++K
Sbjct: 181 AGPHLMTTKPVKAI-KLTSLAGAYWRGNEKNKMLTRIYGISYPKKAQLDEYLTMLEEAKK 239

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           RDHRKL +E+ LF + E+G G  F+  KG  +  TL+ Y R    K  Y E++TP +L +
Sbjct: 240 RDHRKLGKELGLFMMCEEGPGFPFFLPKGMVLKNTLLDYWRELHKKAGYVEVSTPIILSR 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
           HLW+ SGHWD Y+ NM+  +       D   +A+KPMNCPG + V+    +SY++LP+R+
Sbjct: 300 HLWETSGHWDHYKENMYTTQI------DGEDYAIKPMNCPGGMLVYKAEPRSYKDLPLRV 353

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            E G V+R+E SG LHGLMRVR FTQDDAH+F   EQ+ +E   +  LI  +Y  FGF K
Sbjct: 354 GELGLVHRHEKSGQLHGLMRVRCFTQDDAHIFMMPEQIRDEIKGVVALIDEVYSLFGF-K 412

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +G+D  W+ A   ++G L+ +       ++  V  G+GAFYGPK ++ 
Sbjct: 413 YHVELSTRPENSMGTDEDWELATEGLRGALNDLG------LDYVVNEGDGAFYGPKIDFH 466

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D+IGR WQCGTIQ+D  LP RF   Y  +  EK  P+MIHR  FGSIERFIGI+IE+F
Sbjct: 467 LTDSIGRTWQCGTIQLDMQLPQRFELEYTGADGEKHRPIMIHRVAFGSIERFIGILIEHF 526

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P+Q  V  I+   ++YA ++ + L +  +  E D R E I YKIRE  ++K
Sbjct: 527 AGAFPTWLAPVQVKVLPISDKYMDYANKVLDELNAAGVRAEVDSRAEKIGYKIREAQMQK 586

Query: 603 IPIIIICGDKEASERSIGIR-RFGSTTTQK 631
           IP +++ G+KE     + +R RF     QK
Sbjct: 587 IPYMLVVGEKEQEADLVSVRSRFAGDEGQK 616


>gi|289549510|ref|YP_003470414.1| Threonyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01]
 gi|289179042|gb|ADC86287.1| Threonyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01]
          Length = 638

 Score =  545 bits (1404), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 266/642 (41%), Positives = 413/642 (64%), Gaps = 19/642 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           I + FPDGS K +       DVA+SIS SL K AV   +NG + DL+ P++E   +   T
Sbjct: 6   INIQFPDGSQKAYEQGVLARDVAKSISTSLFKAAVVCRVNGTLVDLTYPLQEDCELTFYT 65

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            ED   +  +RH+ AH++A+A+  ++P+V + IGP+I++GFYYD D ++  S  +L +IE
Sbjct: 66  LEDAEGIEAMRHTAAHVLAQALTRLYPQVLLTIGPVIDNGFYYDIDLDESISEVDLNKIE 125

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M++I + +   +K+ +S+++A+ LF  K   YK+EI+E     E +++YRQGE+ DLC
Sbjct: 126 KEMKKIQSENLDIVKENVSYDEAKALF--KDNPYKLEIIEQYQG-EQLSVYRQGEFLDLC 182

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPHV +T  VK   KL KV+GAYWRGDS+  ML RIYG A+ +Q +L  Y  FL E+E 
Sbjct: 183 VGPHVPNTKFVKHV-KLTKVSGAYWRGDSDNKMLQRIYGVAFQSQAQLDDYFEFLREAEA 241

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           R+HRKL +++ LF  +E+  G+ F+   G  +   + +++R  ++K+DY+E+ TP +++Q
Sbjct: 242 RNHRKLGKQLKLFMFSEEAPGMPFYLSNGQFVRNQMENFLREIQLKNDYDEVRTPLMMNQ 301

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y  NM+  K       D   +ALKPMNCPGH+ +F + L+SY++LP+R+
Sbjct: 302 KLWEESGHWDHYHENMYFTKV------DENDYALKPMNCPGHMLIFKNELRSYKDLPLRM 355

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFG V+R+E SG+L+GL+RVR F QDDAH+F  K Q+ +E   I  LI  IY  FGF  
Sbjct: 356 AEFGQVHRHEFSGALNGLLRVRTFCQDDAHIFIMKSQIKSEVEDILKLIDYIYSVFGF-T 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             ++LSTRPE  +G   LW++AE  +  VLD +       +   +  G+GAFYGPK +  
Sbjct: 415 YSIELSTRPEDYLGELKLWNEAEQSLANVLDELG------LKYTINEGDGAFYGPKIDVH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+ R  QC T+Q+DF +P +F+  Y+N  +EK  PV++HRA+FGS++RF GI+IE+F
Sbjct: 469 IKDALNRSHQCATVQLDFQMPEKFDLTYINEQNEKERPVVLHRAIFGSLDRFFGILIEHF 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
           KG  PLW++P+Q  +  ++ +   Y  ++   L+++++ +  D R+E +  KIRE  +KK
Sbjct: 529 KGAFPLWMAPVQVNIIGVSDNNTAYVNKVFEALQNNNIRVVIDDRDEKLGKKIRESQMKK 588

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IP  ++ GD E     +  R++     + + +   I  L +E
Sbjct: 589 IPYTLVLGDHEQENNVVSARKYSHEDNELMDIQAFIAQLQEE 630


>gi|146295981|ref|YP_001179752.1| threonyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
 gi|145409557|gb|ABP66561.1| Ser-tRNA(Thr) hydrolase [Caldicellulosiruptor saccharolyticus DSM
           8903]
          Length = 639

 Score =  545 bits (1403), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 283/621 (45%), Positives = 400/621 (64%), Gaps = 17/621 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           + +T PDG I       +  D+ +SIS  L K+AVA  ING + DL  P+ +  S E++T
Sbjct: 4   VNVTLPDGKIIEVEKSTSALDLVKSISMKLYKEAVACKINGILKDLWTPIDDDCSFEVVT 63

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
                   V  H+ +HI+A++V+ ++ + V++ IGP I++GFYYDFD E+  + + L +I
Sbjct: 64  FASDEGKRVYWHTTSHILAQSVKRLFGDKVKLGIGPAIDNGFYYDFDVEESITKELLEKI 123

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E++MQ+II  D    +  LS E+A++L + + E YKVE++  IP  E ++ YRQGE+ DL
Sbjct: 124 EEEMQKIIKEDLKIERFELSREEAKKLMQQRGENYKVELINDIPEGEIISFYRQGEFVDL 183

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPH+ STG+VK F KL+ VAGAYWRG+S   ML R+YG ++  + +L +YL  LEE++
Sbjct: 184 CTGPHLPSTGRVKAF-KLLSVAGAYWRGNSKNKMLQRVYGISYEKKSQLDEYLTMLEEAK 242

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           +RDHRKL RE+DLF I E G G  F+  KG  I   L  + R + K   Y+EI TP +L 
Sbjct: 243 RRDHRKLGRELDLFDIFEQGPGFPFFLPKGMIIRNILEDFWREEHKKRGYQEIKTPIMLT 302

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW QSGHWD Y+ NM+  K  D      + FA+KPMNCPG + V+     SYRELP R
Sbjct: 303 KDLWVQSGHWDHYKENMYFTKIDD------QEFAIKPMNCPGSILVYKRKSHSYRELPER 356

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           L E G V+R+E SG LHGLMRVR FTQDDAH+F    Q+ +E   + +LI   Y  FGF 
Sbjct: 357 LCELGLVHRHELSGVLHGLMRVRCFTQDDAHIFMLPSQIKDEIKGVIDLIDYFYSVFGF- 415

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
           K  V+LSTRPE  +G+D  W+ AE  +K  L+ +       IN  +  G+GAFYGPK ++
Sbjct: 416 KYHVELSTRPENSMGTDEQWNMAETALKEALEEVG------INYKINEGDGAFYGPKIDF 469

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L+D++ R WQC TIQ+DF +P RF+ +Y+     K  PVM+HR VFGSIERFI I+ E+
Sbjct: 470 HLEDSLKRTWQCATIQLDFQMPERFDLYYIGEDGAKHRPVMLHRVVFGSIERFIAILTEH 529

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           F G  P+WL+PIQ  V  ++ +  +YA +I+  LK +   +E DFR+ET+ YKIR+  ++
Sbjct: 530 FAGAFPVWLAPIQIRVIPVSDNFNDYAAKISQTLKENGFRVEEDFRSETVGYKIRDAQLQ 589

Query: 602 KIPIIIICGDKEASERSIGIR 622
           KIP ++I G+KE  E +I +R
Sbjct: 590 KIPYMVIVGEKERRENTIAVR 610


>gi|239827997|ref|YP_002950621.1| threonyl-tRNA synthetase [Geobacillus sp. WCH70]
 gi|259516491|sp|C5D639|SYT_GEOSW RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|239808290|gb|ACS25355.1| threonyl-tRNA synthetase [Geobacillus sp. WCH70]
          Length = 644

 Score =  545 bits (1403), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 264/652 (40%), Positives = 421/652 (64%), Gaps = 20/652 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSI 59
           M   I++TFPDG++K FP   T   +A SIS  L KKA+A  +N +  DL  P++E GSI
Sbjct: 1   MSEMIRITFPDGAVKEFPKGTTTEQIAASISPGLKKKAIAGKLNDRFIDLRTPIQEDGSI 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT + P +L ++RHS AH+MA+A++ ++  V++ +GP+IE+GFYYD D E+  + ++L
Sbjct: 61  SIITQDMPEALDILRHSTAHLMAQAIKRLYKNVKLGVGPVIENGFYYDIDMEESLTPEDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IE++M++I+  +   +++ +S E+A  L+E   +  K+E++  IP  E +++Y QGE+
Sbjct: 121 PKIEQEMRKIVKENLEIVRKEVSREEAIRLYEEIGDDLKLELINDIPEGETISIYEQGEF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRG HV STG++K+ FKL+ ++GAYWRGDSN  ML RIYGTA+  +++L +YL  L+
Sbjct: 181 FDLCRGVHVPSTGKIKE-FKLLNISGAYWRGDSNNKMLQRIYGTAFFKKEDLDEYLRQLQ 239

Query: 240 ESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTP 297
           E+++RDHRKL +E++LF  ++  G G+  W  KG  I + +  Y+  ++I+  Y+ + TP
Sbjct: 240 EAKERDHRKLGKELELFMTSQKVGQGLPLWLPKGATIRRIIERYIVDKEIELGYQHVYTP 299

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    L++ SGHWD Y+ NMF     D+         L+PMNCP H+ ++   + SYRE
Sbjct: 300 VLGSVELYKTSGHWDHYKDNMFPPMEMDN-----EQLVLRPMNCPHHMMIYKSKIHSYRE 354

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+ +E  ++ NLI+ +YKD
Sbjct: 355 LPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKDEFKRVVNLILEVYKD 414

Query: 418 FGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           FG ++   +LS R     EK    D +W+ A+N+++  +D +     +        GE A
Sbjct: 415 FGLDEYSFRLSYRDPHDKEKYYDDDEMWEKAQNMLREAMDELGLEYYE------AEGEAA 468

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  ++ A+G+D    T+Q+DF LP RF+  Y+    +   PV+IHR V  ++ER
Sbjct: 469 FYGPKLDVQVRTALGKDETLSTVQLDFLLPERFDLTYIGEDGKPHRPVVIHRGVVSTMER 528

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETIN 592
           F+  +IE +KG  P WL+P+Q  V  ++ +A ++YA ++   L+S    +E D R+E I 
Sbjct: 529 FVAFLIEEYKGAFPTWLAPVQVEVIPVSPAAHLDYAYKVKEALQSQGFRVEVDERDEKIG 588

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           YKIRE  I+KIP +++ GDKE +E ++ +R++G   ++ +SL D I  L  E
Sbjct: 589 YKIREAQIQKIPYMLVVGDKEMAENAVNVRKYGEQKSETMSLDDFIAALKAE 640


>gi|295399484|ref|ZP_06809466.1| threonyl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93]
 gi|312109958|ref|YP_003988274.1| threonyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
 gi|294978950|gb|EFG54546.1| threonyl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93]
 gi|311215059|gb|ADP73663.1| threonyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
          Length = 644

 Score =  544 bits (1402), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 261/652 (40%), Positives = 422/652 (64%), Gaps = 20/652 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSI 59
           M   I++TFPDG++K FP   T   +A SIS  L KKA+A  +N ++ DL  P++E GSI
Sbjct: 1   MAEMIRITFPDGAVKEFPKGTTTEQIAASISPGLKKKAIAGKLNDRLVDLRTPIQEDGSI 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT + P +L ++RHS AH+MA+A++ ++  V++ +GP+IE+GFYYD D E+  + ++L
Sbjct: 61  SIITQDMPEALDILRHSTAHLMAQAIKRLYKNVKLGVGPVIENGFYYDIDMEESLTPEDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IE++M++I+  +   +++ +S E+A  L+E   +  K+E++  IP  E +++Y QGE+
Sbjct: 121 PKIEQEMRKIVKENLEIVRKEVSREEAIRLYEEIGDNLKLELINDIPEGETISIYEQGEF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRG HV STG++K+ FKL+ ++GAYWRGDSN  ML RIYGTA+  +++L +YL  L+
Sbjct: 181 FDLCRGVHVPSTGKIKE-FKLLNISGAYWRGDSNNKMLQRIYGTAFFKKEDLDEYLRQLQ 239

Query: 240 ESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTP 297
           E+++RDHRKL +E++LF  ++  G G+  W  KG  + + +  Y+  ++I+  Y+ + TP
Sbjct: 240 EAKERDHRKLGKELELFMTSQKVGQGLPLWLPKGATVRRIIERYIVDKEIELGYQHVYTP 299

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    L++ SGHWD Y+ NMF     D+         L+PMNCP H+ ++ + + SYRE
Sbjct: 300 VLGSVELYKTSGHWDHYKENMFPPMEMDN-----EQLVLRPMNCPHHMMIYKNKIHSYRE 354

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+ +E  ++ NLI+ +YKD
Sbjct: 355 LPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKDEFKRVVNLILEVYKD 414

Query: 418 FGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           FG ++   +LS R     EK    D +W+ A+++++  +D +     +        GE A
Sbjct: 415 FGLDEYSFRLSYRDPHDKEKYYDDDEMWEKAQSMLREAMDELGLEYYE------AEGEAA 468

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  ++ A+G+D    T+Q+DF LP RF+  Y+    +   PV+IHR V  ++ER
Sbjct: 469 FYGPKLDVQVRTALGKDETLSTVQLDFLLPERFDLTYIGEDGKPHRPVVIHRGVVSTMER 528

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETIN 592
           F+  +IE +KG  P WL+P+Q  V  ++  A ++YA ++   L+S    +E D R+E I 
Sbjct: 529 FVAFLIEEYKGAFPTWLAPVQVEVIPVSPEAHLDYAYKVKETLQSQGFRVEVDGRDEKIG 588

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           YKIRE  I+KIP +++ GDKE +E ++ +R++G   ++ ++L D I  L  E
Sbjct: 589 YKIREAQIQKIPYMLVVGDKEMAENAVNVRKYGEQKSETMALADFIAALKAE 640


>gi|218886086|ref|YP_002435407.1| threonyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|226701453|sp|B8DPN2|SYT_DESVM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|218757040|gb|ACL07939.1| threonyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 644

 Score =  544 bits (1402), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 277/626 (44%), Positives = 395/626 (63%), Gaps = 34/626 (5%)

Query: 36  KKAVAVAINGKVCDLSD--PVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQ 93
           K  VA   NG   DL+   P    +IE +  + P  + +IRHS AHIMAEAVQ ++P V+
Sbjct: 32  KNVVACRCNGTPLDLTATVPADTTTIEPVFADSPEGIELIRHSAAHIMAEAVQKLFPGVK 91

Query: 94  VAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESK 153
           V IGP I+ GFYYDFD E+PFS D+L  IE +MQ+I+A   PF +  ++ ++A  LFE  
Sbjct: 92  VTIGPAIDSGFYYDFDYERPFSVDDLEAIEAEMQKIVAAAHPFTRTEMTKDEAVALFEGM 151

Query: 154 KEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSN 213
            EAYKVEI+  IPA + V++YR G++ DLCRGPH+  T  VK F KL+ VAGAYWRGD  
Sbjct: 152 GEAYKVEIVRDIPA-DTVSVYRSGDFVDLCRGPHIPDTSFVKAF-KLLSVAGAYWRGDEK 209

Query: 214 RPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKG 272
             MLSR+YGTA+   + L  +L+ +EE+++RDHRKL +++DLF   ED   G+++WH KG
Sbjct: 210 NRMLSRVYGTAFADPKALKDHLHQIEEAKRRDHRKLGQQLDLFAFHEDVAPGMVYWHPKG 269

Query: 273 WKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
             +   L  ++R++ +K  YE +  PQ+L + +W++SGH+D+YR NM+       T+ D 
Sbjct: 270 MLLRTILEDFLRKEHLKRGYELVQGPQLLRREVWEKSGHYDNYRENMYF------TVIDD 323

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
             + +KPMNC  H+ ++   L+SYR+LP R+ E G V+R+E SG LHGL+RVR FTQDDA
Sbjct: 324 NAYGVKPMNCVSHMLIYKSHLRSYRDLPRRMFELGVVHRHEKSGVLHGLLRVRQFTQDDA 383

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
           H+ C  +Q+  E + +  L+  +   FGF+  +V +STRPEK +GSD  WD A N + G 
Sbjct: 384 HILCRPDQLEAEIIGVIALVRDLMGLFGFDYRIV-ISTRPEKSIGSDEDWDRATNALIGA 442

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
           + T   S    IN G    +GAFYGPK +  + DAIGR+WQ  TIQVDF LP RF+  Y+
Sbjct: 443 VATAGLSHT--INEG----DGAFYGPKIDIKVTDAIGREWQLSTIQVDFTLPDRFDLVYI 496

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
               E+  PVM+HRA+ GS+ERFIG++ E+F G  P W+ P+QA + T+T +  ++A   
Sbjct: 497 GQDGERHRPVMVHRAILGSLERFIGVLTEHFAGAFPTWIVPVQARLLTVTDAQNDFAMGA 556

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR-----RFGS 626
            + L +  L +E D RNE + YK+RE  ++KIP I++ GDKE     + +R       G 
Sbjct: 557 RDQLVAAGLRVEADTRNEKLGYKVREAQLEKIPYILVVGDKEVEAGGVNVRLRNGENLGL 616

Query: 627 TTTQKVSLLDAIPILTKESLPPDCQK 652
            T  +V+          E +  DCQ+
Sbjct: 617 KTLAEVA----------EMIRADCQE 632


>gi|150021207|ref|YP_001306561.1| threonyl-tRNA synthetase [Thermosipho melanesiensis BI429]
 gi|149793728|gb|ABR31176.1| threonyl-tRNA synthetase [Thermosipho melanesiensis BI429]
          Length = 636

 Score =  544 bits (1402), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 283/649 (43%), Positives = 410/649 (63%), Gaps = 24/649 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           +K+ FPDG++K F    T  ++A+SIS  L + AV   ++  + DL+ P+  + S++I+T
Sbjct: 1   MKIKFPDGNVKEFEKGITPGEIAKSISEGLYRNAVGAIVDNILWDLNRPINFDCSLKIVT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPE--VQVAIGPIIEDGFYYDFD-KEQPFSSDELA 120
            +D  +    RH+ AHI+A+AV  I+ E  V++ IGP IE+GFYYDF+        ++L 
Sbjct: 61  KKDKEAPEFFRHTMAHILAQAVMRIYGEENVRLGIGPTIENGFYYDFEILNGTIKEEDLE 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEK+M++II  D P  +  L  ++A ++   K + YKVE++  I   E V+ Y+QGE+ 
Sbjct: 121 NIEKEMKKIIKEDLPIERFELPKDEAIDMMNKKGQIYKVELINEI-NDEKVSFYKQGEFV 179

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+  TG +K F KL+  +GAYWRG    PML RIYGTA+ T++EL  YL  LEE
Sbjct: 180 DLCRGPHLPRTGMIKHF-KLLSASGAYWRGSEKNPMLQRIYGTAFATKEELENYLKMLEE 238

Query: 241 SEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++KRDHRKL  ++ LF I  D  +G+  +  KG  I   L+++ R   ++  Y E+ TP 
Sbjct: 239 AKKRDHRKLGPKLGLFFINTDVAAGMPIFLPKGTIILNELMAFSRSLHEEYGYTEVMTPL 298

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V++  LW QSGHWD Y+ NM+       T K+   +A+KPMNCPGH+ ++ + + SYR+L
Sbjct: 299 VMNVKLWYQSGHWDHYKENMYF------TEKEEVEYAIKPMNCPGHILIYKNNVVSYRDL 352

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RL EFG V+R E SG LHGL+RVR FTQDDAH+FC ++Q+  E  K+  LI  +YK F
Sbjct: 353 PIRLFEFGKVHRYERSGVLHGLLRVRAFTQDDAHIFCRQDQIEEEVSKVVKLIDQLYKPF 412

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF      LST PE  +G +  W+ A N ++ VL+ IK      +   V  GEGAFYGPK
Sbjct: 413 GF-SYRATLSTMPEDHMGDEETWEKATNALRKVLEDIK------LEFEVAEGEGAFYGPK 465

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++ ++D++GR+WQC TIQ+DF +P RF   YV+    +  PVMIH A +GS+ERF GI+
Sbjct: 466 VDFHVRDSLGREWQCATIQLDFQMPERFELTYVDKDGIEKRPVMIHTAKYGSLERFFGIL 525

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+F G  PLWLSPIQ +V  ++   V YA++I ++L  + + +  D RNET+ YKIRE 
Sbjct: 526 IEHFAGAFPLWLSPIQVVVLPVSDKYVSYARKIYSILMENGVRVSVDDRNETLGYKIREA 585

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL---LDAIPILTKE 644
            I KIP +II G++E     I IR       + +++   LD + +  KE
Sbjct: 586 QINKIPYMIIVGEREEESGKISIRSRDGVEQKDIAVEEFLDLLSVSIKE 634


>gi|213161901|ref|ZP_03347611.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E00-7866]
          Length = 530

 Score =  544 bits (1401), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 255/532 (47%), Positives = 361/532 (67%), Gaps = 15/532 (2%)

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTL 173
           + +++  +EK+M E+  ++   +K+ +S  +ARE F  + E+YKV IL E+I   +   L
Sbjct: 1   TQEDVEALEKRMHELAEKNYDVIKKKVSWHEARETFVKRGESYKVSILDENIAHDDKPGL 60

Query: 174 YRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQ 233
           Y   E+ D+CRGPHV +  +    FKLMK AGAYWRGDSN  ML RIYGTAW  ++ L  
Sbjct: 61  YHHEEYVDMCRGPHVPNM-RFCHHFKLMKTAGAYWRGDSNNKMLQRIYGTAWADKKALNA 119

Query: 234 YLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYE 292
           YL  LEE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF+ L  ++R K+K+  Y+
Sbjct: 120 YLQRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQ 179

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P ++D+ LW+++GHWD+Y+  MF       T  + R + +KPMNCPGHV +FN GL
Sbjct: 180 EVKGPFMMDRVLWEKTGHWDNYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGL 233

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
           KSYR+LP+R+AEFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++ 
Sbjct: 234 KSYRDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQIRDEVNACIRMVY 293

Query: 413 SIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
            +Y  FGFEKI+VKLSTRP+KR+GSD +WD AE  +   L+      ++ I     LGEG
Sbjct: 294 DMYSTFGFEKIVVKLSTRPDKRIGSDEMWDRAEADLAVALE------ENNIPFEYQLGEG 347

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           AFYGPK E+ L D + R WQCGT+Q+DF+LPSR +A YV   +E+  PVMIHRA+ GS+E
Sbjct: 348 AFYGPKIEFTLYDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSME 407

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
           RFIGI+ E F G  P WL+P+Q +V  IT S  EY  E+   L++  + ++ D RNE I 
Sbjct: 408 RFIGILTEEFAGFFPTWLAPVQVVVMNITDSQSEYVNELTQKLQNAGIRVKADLRNEKIG 467

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +KIREH+++++P +++CGDKE     + +R         + + D I  L +E
Sbjct: 468 FKIREHTLRRVPYMLVCGDKEVEAGKVAVRTRRGKDLGSLDVNDVIEKLQQE 519


>gi|291287861|ref|YP_003504677.1| threonyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
 gi|290885021|gb|ADD68721.1| threonyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
          Length = 637

 Score =  543 bits (1400), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 278/643 (43%), Positives = 408/643 (63%), Gaps = 21/643 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           + +  PDG+       AT  DVA+ IS  LAKKA+A  ING   D+   + +G ++++IT
Sbjct: 1   MNVLLPDGAKLEIQDGATAYDVAKQISVGLAKKAIAAEINGTSKDIYAELSDGDTVKLIT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQI 122
            +DP +L +IRHS AH+MA AV+ ++ +V+V IGPII+DGFYYDFD  ++ F+ D+L  I
Sbjct: 61  EKDPEALDIIRHSTAHLMAHAVKRLFDDVKVTIGPIIKDGFYYDFDMGDRKFTPDDLKAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK M +I A   P  ++ +    A  L E   E YKVE++  I   E+V+LY QG++ DL
Sbjct: 121 EKMMAKIAAEAIPVKRRDVKSSDA--LKEFADEKYKVELITDI-GDEHVSLYDQGDFTDL 177

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +T ++K F KL+ VAGAYWRG+ N  ML RIYGT+W T+++L  YL  LEE+E
Sbjct: 178 CRGPHVDNTKRLKHF-KLLSVAGAYWRGNENNKMLQRIYGTSWQTKEDLDAYLNMLEEAE 236

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVL 300
           KRDHRK+ +++ LF  +E+ G+G   +   G  +   L +Y +++ IK  Y+ +  P +L
Sbjct: 237 KRDHRKIGKQLKLFTFSEEAGAGFPIYLPNGGALRNVLETYEKQEHIKRGYDIVYGPSIL 296

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            Q LW++SGH+D+YR NM+  K  D        + +KPMNC  H+ VFN  ++SYR+LP 
Sbjct: 297 KQDLWKKSGHYDNYRENMYFTKIDD------VDYGVKPMNCLAHMMVFNSDIRSYRDLPQ 350

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R  E G+V+R+E SG LHGL+RVR FTQDDAH+FCT EQ+ +E + I + +  +   FGF
Sbjct: 351 RYFELGTVHRHEKSGVLHGLLRVRAFTQDDAHLFCTPEQLNDEIIGIIDFVDEVMGKFGF 410

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           E   +++ST+PEK +GSD  W+ A N +   L T     +  IN G    +GAFYGPK +
Sbjct: 411 E-YEIEVSTKPEKYIGSDDNWEKATNALFEALKT--KGLEYEINEG----DGAFYGPKID 463

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
             LKDAIGR WQC TIQ DFNLP +F+  Y+    +K  PVM+HR + GS++RFIG++ E
Sbjct: 464 IKLKDAIGRYWQCATIQADFNLPEKFDLNYIGEDGQKHRPVMLHRVILGSVDRFIGVLTE 523

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +F G  P+W++P Q  V  IT   ++Y + +   LK+    +++D RNE + +KIRE  +
Sbjct: 524 HFAGAFPVWVAPKQVRVINITDGQLDYCKALVQKLKAEGFRVDSDLRNEKVGFKIREAQM 583

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +KIP ++I G  E  +  + +R        ++     + +LT+
Sbjct: 584 EKIPHMLIIGQNEVDKELVSVRLRNGENKNELDFSTYLGVLTE 626


>gi|310658431|ref|YP_003936152.1| threonyl-tRNA synthetase [Clostridium sticklandii DSM 519]
 gi|308825209|emb|CBH21247.1| threonyl-tRNA synthetase [Clostridium sticklandii]
          Length = 637

 Score =  543 bits (1400), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 267/620 (43%), Positives = 397/620 (64%), Gaps = 16/620 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+   DGS+K F       DVA SIS  LA+  V   ING+V DL  P+ +   +E + 
Sbjct: 2   IKIELKDGSLKEFESGIRAIDVANSISEGLARAIVGAKINGEVKDLKTPINDDAKLEFVK 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            ED     V  H+  H+MA+A++ ++PE ++AIGP IE+GFYYD D E   S ++L +IE
Sbjct: 62  FEDKDGKEVFWHTSTHVMAQAIKRLYPEAKLAIGPAIENGFYYDIDLEHRLSPEDLEKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M++I+  +    +  L  ++A +  +   E YKVE++E +     ++ Y+QGE+ DLC
Sbjct: 122 AEMKKIVKEEFEVERYELPKDEAIDFMKKLGEDYKVELIEGLEEGSTISFYKQGEFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+ +  +VK F KL+ VAGAYWR D +  ML R+YG A+  +++L  Y+  +EE++ 
Sbjct: 182 AGPHLPNVKKVKAF-KLLSVAGAYWRADQSNKMLQRVYGIAFEKKKDLDDYIQMMEEAKL 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQ 302
           RDHRKL +E++LF + ++G G  F+  KG  +   L+ Y R   ++D Y EI TP +L++
Sbjct: 241 RDHRKLGKELELFTLLDEGPGFPFFLPKGTVLKNKLLEYWREVHREDGYVEIETPIILNR 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW +Y+ NM+ V+       D   FA+KPMNCPG + V+   ++SY++ P+R+
Sbjct: 301 QLWETSGHWFNYKENMYTVEI------DEEDFAIKPMNCPGGMLVYQTKMRSYKDFPIRM 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            E G V+R+E SG+LHGLMRVR FTQDDAH+F   EQ+ +E   + +LI  IYK FGF  
Sbjct: 355 GEIGRVHRHELSGALHGLMRVRAFTQDDAHIFMLPEQIKDEIKGVVSLIDKIYKTFGF-S 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             ++LSTRPEK +G  ++WD+AE+ +K  L+ +       +   +  G+GAFYGPK ++ 
Sbjct: 414 YHLELSTRPEKFLGEISMWDEAESNLKAALEELG------LPYIINEGDGAFYGPKIDFH 467

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+D IGR WQCGTIQ+D+ LP RF   Y+    EK  PVMIHR  FGSIERFIGI+IE++
Sbjct: 468 LRDCIGRTWQCGTIQLDYQLPERFELSYIGKDGEKHRPVMIHRVAFGSIERFIGILIEHY 527

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  PLW++P+Q  +  I+   ++YA++I   +    + +E D R E I YKIRE  ++K
Sbjct: 528 AGKFPLWIAPVQVKILPISDKFMDYAKQIEKAMYDAKIRVELDDRAEKIGYKIREAQLEK 587

Query: 603 IPIIIICGDKEASERSIGIR 622
           +P +II G+KE +E +I +R
Sbjct: 588 VPYMIIVGEKELNEGNISVR 607


>gi|212638370|ref|YP_002314890.1| threonyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
 gi|226701399|sp|B7GGN9|SYT_ANOFW RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|212559850|gb|ACJ32905.1| Threonyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
          Length = 643

 Score =  543 bits (1400), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 266/652 (40%), Positives = 419/652 (64%), Gaps = 20/652 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSI 59
           M   +K+TFPDG++K FP   T  D+A SIS  L KKA+A  +N ++ DL  P+ E G+I
Sbjct: 1   MADVVKITFPDGAVKEFPKGVTTEDIAASISPGLKKKAIAGKLNERMIDLRTPIEEDGAI 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT + P +L ++RHS AH+MA+AV+ ++ +V++ +GP+IE+GFYYD D + P ++++L
Sbjct: 61  SIITQDMPEALDILRHSTAHLMAQAVKRLYKDVKLGVGPVIENGFYYDIDVDVPITAEDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IE++M++I+  +   +++ +S E+A   +E   +  K+E++  IP  E V++Y QGE+
Sbjct: 121 PKIEQEMKKIVKENLDIVRKEVSREEAIRRYEEIGDPLKIELINDIPEGEVVSIYEQGEF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRG HV STG++K+ FKL+ VAGAYWRGDS   ML RIYGTA+  +++L +YL  L+
Sbjct: 181 FDLCRGVHVPSTGKIKE-FKLLSVAGAYWRGDSKNKMLQRIYGTAFFKKEDLDEYLRLLQ 239

Query: 240 ESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTP 297
           E+++RDHRKL +E+DLF  ++  G G+  W  KG  I +T+  Y+  +++   Y+ + TP
Sbjct: 240 EAKERDHRKLGKELDLFMTSQKVGQGLPLWLPKGATIRRTIERYIVDKELSLGYQHVYTP 299

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    L++ SGHWD Y+  MF     D+         L+PMNCP H+ V+ H + SYRE
Sbjct: 300 VLGSVELYKTSGHWDHYKDGMFPPMEMDN-----EQLVLRPMNCPHHMMVYKHKIHSYRE 354

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+ +E  ++ NLI+ +YKD
Sbjct: 355 LPIRIAELGTMHRYEMSGALTGLQRVRGMTLNDAHIFVRPDQIKDEFKRVVNLILDVYKD 414

Query: 418 FGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           FG      +LS R     EK    DA+W+ A++++K  +D +       ++     GE A
Sbjct: 415 FGLTDYSFRLSYRDPQDKEKYYDDDAMWEKAQSMLKEAMDELG------LDYYEAEGEAA 468

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  ++ A+G+D    T+Q+DF LP RF+  Y+    +   PV+IHR V  ++ER
Sbjct: 469 FYGPKLDVQVRTALGKDETLSTVQLDFLLPERFDLTYIGEDGKPHRPVVIHRGVVSTMER 528

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETIN 592
           F+  +IE +KG  P WL+PIQ  V  +  S  ++YA E+ + L+   + +E D R E I 
Sbjct: 529 FVAFLIEEYKGAFPTWLAPIQVQVIPVAPSIHMDYAYEVKHALQVAGIRVEVDEREEKIG 588

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           YKIRE  ++KIP +++ GD E +ER++ +R++G   ++ + L   +  + KE
Sbjct: 589 YKIREAQMQKIPYMLVVGDNEVNERAVNVRKYGEQKSETMPLDAFVDSIAKE 640


>gi|70725135|ref|YP_252049.1| threonyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
 gi|68445859|dbj|BAE03443.1| threonyl-tRNA synthetase 2 (Threonine--tRNA ligase) [Staphylococcus
           haemolyticus JCSC1435]
          Length = 638

 Score =  543 bits (1400), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 266/642 (41%), Positives = 415/642 (64%), Gaps = 19/642 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           I + FPDGS K +      SDVA+SIS+SL K+AV   +N ++ DL+ P++E   +   T
Sbjct: 6   INIQFPDGSNKAYQAGVLASDVAKSISQSLYKEAVVCRMNDRLVDLTHPLQEDCELTFYT 65

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   L V+RHS AH++A+A+  ++P+V++ IGP+IE GFYYD D ++  S  +L +IE
Sbjct: 66  LKDQEGLNVMRHSAAHVLAQALTRLYPDVKLTIGPVIEHGFYYDIDLDESISEADLNKIE 125

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M++I + +  F +Q LS+ +A+ +F  K   YK+E++E     + ++LY+QGE+ DLC
Sbjct: 126 KEMKKIHSENLKFERQNLSYAEAKNIF--KDNPYKLELIEE-HKDDQLSLYQQGEFIDLC 182

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPHV ST  V  F KL KV+GAYWRG+S+  ML RIYG A+ ++ +L  Y  FL E+E+
Sbjct: 183 VGPHVPSTKFVNHF-KLTKVSGAYWRGNSDNKMLQRIYGVAFRSKDQLDDYFEFLREAEE 241

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           R+HR+L +++ LF  +E+  G+ F+   G  I   + +++R  ++K DY+E+ TP ++++
Sbjct: 242 RNHRRLGKQLKLFMFSEEAPGMPFYLSNGQFIRNQMENFLREVQLKHDYDEVRTPLMMNK 301

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y  NM+  K       D   +ALKPMNCPGH+ +F + L+SY++LP+R+
Sbjct: 302 RLWEESGHWDHYHENMYFTKV------DENDYALKPMNCPGHMLIFKNELRSYKDLPLRI 355

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFG V+R+E SG+L+GL+RVR F QDDAH+F  K Q+ +E  +I  LI  IY  FGFE 
Sbjct: 356 AEFGQVHRHEFSGALNGLLRVRTFCQDDAHIFIMKSQIKSEVQEILKLIDYIYSVFGFE- 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             ++LSTRP+  +G   LW++AE  +  VLD +       ++  +  G+GAFYGPK +  
Sbjct: 415 YSIELSTRPDDYLGELDLWNEAEQSLAHVLDDLG------LDYSINEGDGAFYGPKIDVH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+ R  QC T+Q+DF +P +F   Y+N  +EK  PV++HRAVFGS++RF GI+IE+F
Sbjct: 469 IKDALNRSHQCATVQLDFQMPEKFELTYINEQNEKERPVVLHRAVFGSLDRFFGILIEHF 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
           KG  PLW++P+Q  +  ++ +   Y + +A  L+  ++ +  D R E +  KIRE  + K
Sbjct: 529 KGAFPLWMAPVQVNLIGVSDNNDGYVRTVAEALRDENIRVAIDDREEKLGKKIRESQLNK 588

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           I   ++ GD E    ++ +R++     + + +   I  L  E
Sbjct: 589 ISYTLVLGDDEQQHHTVSVRKYAHDDNETMDIQAFIEKLKHE 630


>gi|323698513|ref|ZP_08110425.1| threonyl-tRNA synthetase [Desulfovibrio sp. ND132]
 gi|323458445|gb|EGB14310.1| threonyl-tRNA synthetase [Desulfovibrio desulfuricans ND132]
          Length = 645

 Score =  543 bits (1399), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 274/636 (43%), Positives = 398/636 (62%), Gaps = 23/636 (3%)

Query: 21  ATGSDVAESISRSLAKK----AVAVAINGKVCDLSDPVREG--SIEIITPEDPRSLAVIR 74
           A G+  A+++   L+KK     VAV     + DLS PV E   +IE +  +    L +IR
Sbjct: 13  ADGASCADALKEGLSKKQFKNVVAVKCGDAILDLSTPVTETCTTIEPVFADSEEGLKIIR 72

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDS 134
           HS AH+MAEAV+ ++P  +V IGP I DGFYYDFD E+PF+ ++L  IEK+M   +  D 
Sbjct: 73  HSAAHVMAEAVKKLFPTAKVTIGPAITDGFYYDFDYERPFTPEDLEAIEKEMLSSVGADK 132

Query: 135 PFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQV 194
           PF++  +S  +A+++FE+K E YK EI++ +   E  ++Y  G++ DLCRGPHV  TGQ+
Sbjct: 133 PFVRTVMSKAEAKKMFEAKGETYKSEIMDDLGGDE-FSIYTHGDFADLCRGPHVARTGQI 191

Query: 195 KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMD 254
           K F KL+ VAGAYWRGD     L RIYGTAW   + L QYL  LEE++KRDHRKL +++D
Sbjct: 192 KAF-KLLSVAGAYWRGDEKNKQLQRIYGTAWEDPKALKQYLNRLEEAKKRDHRKLGKQLD 250

Query: 255 LFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWD 312
           LF  +++ G G+  WH +G  +   L  + R++ +K  Y+ +  P +L + LW++SGH+D
Sbjct: 251 LFSFSDEVGPGMSLWHPRGMLLRAILEDFERKEHLKRGYDLVQGPIILKRELWEKSGHYD 310

Query: 313 SYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE 372
           +YR NM+  +       D + + +KPMNC  H+ ++   + SYR+LP R  E G V+R+E
Sbjct: 311 NYRENMYFTEI------DEQAYGIKPMNCLAHMIIYKRKIMSYRDLPQRYFELGVVHRHE 364

Query: 373 PSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
            SG LHGLMRVR FTQDDAH+ C  +Q+  E L +      IY  F +E   V+LSTRP 
Sbjct: 365 KSGVLHGLMRVRTFTQDDAHLICRPDQVEEEILNLIKFYKDIYALFNYE-FDVELSTRPA 423

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
           K +G+D  W+ A   ++  LD  K+     IN G    +GAFYGPK ++ L+D+IGR WQ
Sbjct: 424 KSIGTDEDWELATEGLRQALD--KSGMPYAINEG----DGAFYGPKIDFHLRDSIGRSWQ 477

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
           CGTIQVDF LP RF+  YV    E+  PVMIHRA+ GSIERFIG++ E+  G  P+WL+P
Sbjct: 478 CGTIQVDFTLPERFDIVYVGEDGERHRPVMIHRAMLGSIERFIGVLTEHCAGAYPVWLAP 537

Query: 553 IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
           +QA +  +T + +++ ++    L S  + +E D RNE + YKIRE  ++K+P +++ GDK
Sbjct: 538 VQARLLNVTDAQLDFMKKAEAFLVSKGIRVEADTRNEKLGYKIREAQVEKVPYMLVIGDK 597

Query: 613 EASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
           E     + IR         V+L +A  ++ + +  P
Sbjct: 598 EVEAGCVNIRSRDGEDPGMVTLEEAAQLILEAAKAP 633


>gi|149182849|ref|ZP_01861310.1| threonyl-tRNA synthetase [Bacillus sp. SG-1]
 gi|148849464|gb|EDL63653.1| threonyl-tRNA synthetase [Bacillus sp. SG-1]
          Length = 643

 Score =  543 bits (1398), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 262/652 (40%), Positives = 421/652 (64%), Gaps = 20/652 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSI 59
           M   +K+TFPDG++K FP   T  ++A SIS  L KKA+A  +NG + DL  P+ E G+I
Sbjct: 1   MSEALKITFPDGNVKEFPQGTTTEEIASSISPGLKKKALAGKVNGNLIDLKTPITEDGAI 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EI+TP+   +L V+RHS AH+MA+A++ ++P+V++ IGP+I+ GFYYD D E   + ++L
Sbjct: 61  EIVTPDHEDALEVLRHSTAHLMAQAIKRLYPDVKLGIGPVIDGGFYYDIDTEHSITPEDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IEK+M++I   +   +++ +S ++A++++E   + YK+E+LE+IP  E V++Y QG++
Sbjct: 121 PKIEKEMKKIAESNLEVIRKEVSRDEAQKMYEEVSDEYKIELLEAIPEGEQVSIYEQGDF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRG HV STG++K+ FKL+ +AGAYWRG+S+  ML RIYGTA+  +++L ++L  LE
Sbjct: 181 FDLCRGIHVPSTGKIKE-FKLLSIAGAYWRGNSDNKMLQRIYGTAFFKKEDLKEHLRLLE 239

Query: 240 ESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTP 297
           E+++RDHRK+ +E++LF  ++  G G+  W  KG  I + +  Y+  ++ K  Y+ + TP
Sbjct: 240 EAKERDHRKIGKELNLFMNSQKVGQGLPMWLPKGATIRRIIERYIVDKEEKLGYDHVYTP 299

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    L++ SGHWD Y+ NMF V   D+         L+PMNCP H+ ++ + + SYRE
Sbjct: 300 VMGSVDLYKTSGHWDHYQENMFPVMDMDN-----EQLVLRPMNCPHHMMIYKNSIHSYRE 354

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+  E  ++  L++ +YKD
Sbjct: 355 LPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHLFVRPDQIKEEFKRVVRLVLEVYKD 414

Query: 418 FGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           F       +LS R     EK    D +W+ A+ ++K  +D ++      I+     GE A
Sbjct: 415 FDLNDYSFRLSYRDPQDTEKYFDDDEMWNKAQQMLKEAMDEME------IDYFEAEGEAA 468

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  +K A+G++    T+Q+DF LP RF+  Y+    +   PV+IHR V  ++ER
Sbjct: 469 FYGPKLDVQVKTALGKEETLSTVQLDFLLPERFDLTYIGEDGKHHRPVVIHRGVVSTMER 528

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETIN 592
           F+  +IE +KG  P WL+P+Q  V  ++     +YA+++   L++  L +E D R+E I 
Sbjct: 529 FVAFLIEEYKGAFPTWLAPVQVQVIPVSPDVHFDYAKKVQEELQAQGLRVELDSRDEKIG 588

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           YKIRE  + KIP +++ GD E  E ++ +R++G   ++ VSL D +  +T E
Sbjct: 589 YKIREAQMSKIPYMLVVGDNEIQEEAVNVRKYGEQKSETVSLSDFVQKVTDE 640


>gi|94971761|ref|YP_593809.1| threonyl-tRNA synthetase [Candidatus Koribacter versatilis
           Ellin345]
 gi|94553811|gb|ABF43735.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Candidatus
           Koribacter versatilis Ellin345]
          Length = 659

 Score =  542 bits (1397), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 275/652 (42%), Positives = 408/652 (62%), Gaps = 30/652 (4%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAV-----AVAING-----KVCDL 50
           M   IK+  PDGS+K      T  D+A+ IS  LA  A+      +  NG     ++ DL
Sbjct: 1   MSDQIKVKLPDGSVKEVSKGTTALDIAKGISPRLADAALAAKVAPLPHNGDQPEARLVDL 60

Query: 51  SDPVREGS-IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD 109
           + P+ E S ++++T  DP +L V RHS AH++A AV  ++PE ++  GP  E+GF+YDF 
Sbjct: 61  TRPLEEDSELKLLTDRDPEALEVYRHSSAHLLAAAVLDLFPETKLGHGPSTENGFFYDFY 120

Query: 110 KEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIP-AK 168
           ++ PF+ ++L +IEK+MQE++  D P+ +++L  E++ E F+++ +  K   +E      
Sbjct: 121 RQTPFTPEDLEKIEKRMQELVKEDVPYAREFLPREESLERFKTEGDFMKCHFIEQFTKPD 180

Query: 169 ENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQ 228
           E +++Y+ G++ D CRGPH+ STG++K F KL+ +AGAYW GD   P L RIYGT++ ++
Sbjct: 181 EKISIYKTGKFLDFCRGPHIPSTGKIKAF-KLLNIAGAYWLGDEKNPQLQRIYGTSFFSK 239

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRRK- 286
           +++ +Y   LEE++KRDHR L +++DLF I E  G G+IFWH KG  I + +  +MR + 
Sbjct: 240 KDMDEYFAKLEEAKKRDHRVLGKQLDLFSIQELAGPGLIFWHPKGGIIRKEMEDWMREEY 299

Query: 287 IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA 346
           +K  Y  + TP V    LW+ SGH   Y+ N F     DD       + LKPMNCPGHV 
Sbjct: 300 LKRGYSLVVTPHVARTDLWKISGHTGYYKQNFFTPMELDDA-----EYMLKPMNCPGHVL 354

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           ++   L+SYR+LP+RL E G+VYR E SG +HGL+RVRGFTQDDAH+FCT  Q+ +E   
Sbjct: 355 IYRDQLRSYRDLPMRLGEMGTVYRYERSGVMHGLLRVRGFTQDDAHIFCTPSQIEDEISG 414

Query: 407 IHNLIISIYKDFGFEKIMVKLST-RPEKR---VGSDALWDDAENIMKGVLDTIKNSSQDR 462
             +  IS+   +GF +  V+LS   P  R   +G+D  W+ A+  +K VLD         
Sbjct: 415 CIDFAISVLHTYGFNEFKVELSEWDPNDRKSFIGTDEQWNLAQGSLKKVLDA------RG 468

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
           I    + GE AFYGPK +  L DAIGR WQ  T+Q DF LP RF   YV    ++  P+M
Sbjct: 469 IPYKSMPGEAAFYGPKIDVKLVDAIGRLWQLSTVQFDFTLPQRFELEYVGEDGKRHQPLM 528

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSI 582
           +HRA++GSIERF G++IE++ G  P+WLSP+Q ++  I    +EYA ++ ++LK+  + +
Sbjct: 529 VHRALYGSIERFFGVLIEHYAGAFPVWLSPVQTVLVPIGEKHLEYANKVGDVLKAKGIRV 588

Query: 583 ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           E D RNE +N KIREH+++K+P I++ GDKEA   S+ +R  G   T+ V L
Sbjct: 589 EVDGRNEKMNAKIREHALQKVPFILVVGDKEAEATSVNVRTRGKDKTETVPL 640


>gi|116747872|ref|YP_844559.1| threonyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
 gi|116696936|gb|ABK16124.1| threonyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
          Length = 644

 Score =  542 bits (1397), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 270/650 (41%), Positives = 411/650 (63%), Gaps = 22/650 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKA-VAVAINGKVCDLSDPVRE-GS 58
           M ++I +T  DG+ K+FP    G    E +  S      VA  +NG   DL   + E  +
Sbjct: 1   MSAEISVTLADGTTKSFP---RGVSAGEVLKASGGPNGWVAAKVNGVPVDLIVGIEEDAA 57

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           +E I  +    L ++RHS AH+MA+AV+S++PE +VAIGP I++GFYYDF+ E+PF+ D+
Sbjct: 58  VEGIRADSEVGLEILRHSAAHVMAQAVKSLFPEARVAIGPAIDNGFYYDFEVERPFTQDD 117

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L +IE KM+E++     F ++ L  ++A + F  + E YKVE+L+   +   V+ Y QG+
Sbjct: 118 LDRIEAKMKELVGAKLKFERKVLPRDEAIDFFTRRGEGYKVELLQGF-SDPTVSFYTQGD 176

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + DLCRGPHV  +G V+ F KL  VAGAYWRGD +  ML RIYGTA+  +  L +YL+FL
Sbjct: 177 FVDLCRGPHVPHSGYVRAF-KLTSVAGAYWRGDEHNAMLQRIYGTAFADRDALKKYLHFL 235

Query: 239 EESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINT 296
           EE++KRDHR+L RE+DLF  +++ G+G++ +H +G  +   L ++ +R+ ++  Y  +  
Sbjct: 236 EEAQKRDHRRLGRELDLFSFSDEVGAGMVIYHPRGALLRHILEAFEKREHLRRGYHIVMG 295

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +L   LW++SGH++ YR NM+  +  +      +++ +KPMNC  H+ ++   L+SYR
Sbjct: 296 PTLLKTELWKRSGHFEHYRENMYFTEIEE------QSYGIKPMNCLAHMLIYKSRLRSYR 349

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +LP+R  E G+V+R+E SG LHGL RVR FTQDDAH+ CT EQ+  E   I + +I +  
Sbjct: 350 DLPLRYFELGTVHRHERSGVLHGLTRVRQFTQDDAHILCTPEQLHGEIQSIIDFVIEVMG 409

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
            FGF   M ++STRP K +GSD  W+ A + +   +D +++     I   V  GEGAFYG
Sbjct: 410 IFGFNHEM-EISTRPAKSIGSDEDWERATSAL---IDALEDKG---IPYQVCEGEGAFYG 462

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK +  L+DA+ R WQC TIQ DF LP RF+  YV     +  PVM+HR V GS+ERFIG
Sbjct: 463 PKIDVKLRDALDRKWQCATIQCDFTLPDRFDLTYVGVDGNRHRPVMVHRVVLGSLERFIG 522

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +++E+F G  P WL+P+QAIV T+T   +E+A+ + + L+   + +E D RNE + YKIR
Sbjct: 523 VLVEHFAGAFPTWLAPVQAIVVTVTDGQIEFARNMYDRLREAGVRVELDDRNEKLGYKIR 582

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           E  ++K+P +++ GD+E +   +  RR   T  + ++      ++ KE L
Sbjct: 583 EAQMQKVPYMLVIGDREVAAGGVAPRRRDGTQLELIAPEAFAAMIQKECL 632


>gi|209523462|ref|ZP_03272017.1| threonyl-tRNA synthetase [Arthrospira maxima CS-328]
 gi|209496204|gb|EDZ96504.1| threonyl-tRNA synthetase [Arthrospira maxima CS-328]
          Length = 622

 Score =  542 bits (1397), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 284/632 (44%), Positives = 383/632 (60%), Gaps = 44/632 (6%)

Query: 50  LSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD 109
           LS   R  S E  +  D   L  IRH+CAHI+A AVQ ++PE +VAIGP  + GFYYDFD
Sbjct: 2   LSQINRPTSEENHSQRDGEKLRRIRHTCAHILAMAVQKLFPETKVAIGPTTDTGFYYDFD 61

Query: 110 KEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKE 169
           +++PF+ ++L QI K+M+ II  + P +++ ++ E+ R   E   E  K+EIL+SIP  E
Sbjct: 62  RKEPFTPEDLGQITKEMKRIIKGNLPVIREEVNREQIRAEIEKLNEPLKLEILDSIPETE 121

Query: 170 NVTLYRQGE--------------------------WFDLCRGPHVRSTGQVK-KFFKLMK 202
            +T Y  G                           W+DLC GPH+ STG++      L  
Sbjct: 122 TITRYFIGSPDMGRTNHPEVEPSLISPVVIPTQEFWWDLCAGPHLNSTGEINPDALALES 181

Query: 203 VAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED- 261
           VAGAYWRGD   P L RIYGTAW T +EL  Y    EE++KRDHRKL +E+DLF I ED 
Sbjct: 182 VAGAYWRGDETLPQLQRIYGTAWETPEELEYYQQQKEEAKKRDHRKLGQELDLFSIQEDA 241

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           G G++FWH KG ++   +  Y R+  ++D YE + +P + +  LW+ SGH+D YR NMF 
Sbjct: 242 GGGLVFWHPKGSRMRLLIEDYWRQAHLQDGYELLYSPHIANLELWKTSGHYDFYRENMF- 300

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
               D    + +++ LKPMNCP HV  +   L SYRELP+R AE G+VYR E SG LHGL
Sbjct: 301 ----DQIEIENQSYQLKPMNCPFHVLTYQSHLHSYRELPIRWAELGTVYRYERSGVLHGL 356

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           MRVRGFTQDDAH+FC  EQ+ +E L + NL   I  DFGF K  V LSTRP K VG+DA+
Sbjct: 357 MRVRGFTQDDAHIFCLPEQVADEILGVLNLTEKILSDFGFSKYEVNLSTRPSKSVGNDAV 416

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDF 500
           W  A + +   L+T      D +      G GAFYGPK +  ++DAIGR WQC TIQVDF
Sbjct: 417 WQLATDALIAALNT---KGWDYVTDE---GGGAFYGPKIDIKIQDAIGRLWQCSTIQVDF 470

Query: 501 NLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTI 560
           NLP RFN  YV +   +  P+MIHRA+FGS+ERF GI+IEN+ G+ PLWL+P+Q  V  +
Sbjct: 471 NLPERFNMEYVAADGSRQRPIMIHRAIFGSLERFFGILIENYAGDFPLWLAPVQVRVLAV 530

Query: 561 TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
           +    +YAQ IA  L+  ++  E D   E +  +IR   ++KIP+ ++ G +E   +S+ 
Sbjct: 531 SDRFRDYAQSIAQSLRQQNIRAEVDNTGERLGKQIRNSELEKIPVTVVIGQRELDNQSLS 590

Query: 621 IRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           +R   S     ++L    P LT+E L    +K
Sbjct: 591 VRTRSSGDLGTMTL----PQLTEEILKAIAEK 618


>gi|288818602|ref|YP_003432950.1| threonyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|288788002|dbj|BAI69749.1| threonyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|308752193|gb|ADO45676.1| threonyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
          Length = 637

 Score =  542 bits (1396), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 275/607 (45%), Positives = 397/607 (65%), Gaps = 18/607 (2%)

Query: 22  TGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPEDPRSLAVIRHSCAHI 80
            G+ + E    +  + AV   +NGK+ DL  P+RE  +I  I   DP SL ++RHS AHI
Sbjct: 15  AGTPLGEIYQMAGVENAVGGKVNGKIYDLQTPIREDANIVPIYKSDPESLEILRHSLAHI 74

Query: 81  MAEAVQSIW--PEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQIEKKMQEIIARDSPFL 137
           MA+A++ I+   +V + +GP  E+GFYYD + E    S D+L++IE+KM+EII R+ P L
Sbjct: 75  MAQALKEIYGKEKVHLGVGPTTEEGFYYDVEIEGVRLSEDDLSKIEEKMREIIQRNYPIL 134

Query: 138 KQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
           ++ L  E+A +LFE  +E YK+EI++ I   + +++Y Q ++ DLCRGPH+ +TG    F
Sbjct: 135 RRELDREEAIKLFEKLREKYKLEIIKGISPDDVISVYEQNDFVDLCRGPHLPTTGMAGAF 194

Query: 198 FKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFH 257
            KL  ++GAYWRGDS++PML RIYG A+   +EL + L F EE++KRDHRKL R+++ F 
Sbjct: 195 -KLTHISGAYWRGDSSQPMLQRIYGMAFWDSKELEERLKFYEEAKKRDHRKLGRDLEFFI 253

Query: 258 IAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYR 315
           I ED G G++ W  KG    + L  Y R + +K  Y+ + TP + +  LWQ SGH D YR
Sbjct: 254 IDEDVGPGLVLWLPKGGIYRKILEDYWREEHLKRGYQFVYTPHIGNAKLWQISGHLDYYR 313

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            NMF+    D        + +KPMNCP H+A++   ++SY+ELP++LAE G+VYR E SG
Sbjct: 314 PNMFSSMQVDQ-----EEYFVKPMNCPFHIAIYKSKVRSYKELPLKLAELGTVYRYEMSG 368

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
            LHGLMRVRGFTQDDAH+ CT+EQ+ +   +     IS+ +DFGFE+  V +ST+PE  +
Sbjct: 369 VLHGLMRVRGFTQDDAHIICTEEQVEDVIHQTLEFAISMLRDFGFEEFKVYISTKPEDAI 428

Query: 436 GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGT 495
           GS   W  AEN +K  ++++    Q      +  G GAFYGPK +  +KDAIGR WQC T
Sbjct: 429 GSPDQWQLAENSLKKAVESMGIPYQ------IDEGGGAFYGPKIDVKIKDAIGRLWQCST 482

Query: 496 IQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQA 555
           IQ DFNLP RF+  YV   +++  P MIHRA+ GSIERF GI++E++ G LP+WLSP+Q 
Sbjct: 483 IQFDFNLPERFDMEYVGPDNKRHRPYMIHRALLGSIERFTGILLEHYAGALPVWLSPVQV 542

Query: 556 IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEAS 615
            +  I  + ++Y +++ N LK   L +E D R+E ++ KIR+  ++KIP +I+ GDKE S
Sbjct: 543 RLIPIGEAHMDYTKKLENRLKEEGLRVEVDDRDERLSAKIRDAEVQKIPYVIVIGDKEVS 602

Query: 616 ERSIGIR 622
           +  I +R
Sbjct: 603 QGKISVR 609


>gi|312128091|ref|YP_003992965.1| threonyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
 gi|311778110|gb|ADQ07596.1| threonyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
          Length = 639

 Score =  541 bits (1395), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 279/621 (44%), Positives = 399/621 (64%), Gaps = 17/621 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I +T PDG I       +  +  ++IS  L K+AVA  I+G + DL   + ++ S E++T
Sbjct: 4   IAVTLPDGKIVEAEKGISAMEFIKTISMRLYKEAVACKIDGVLKDLWTSLEKDCSFEVVT 63

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
             +     V  H+ +HI+A+AV+ ++ + V++ IGP I++GFYYDFD E+  + + L +I
Sbjct: 64  FSNDEGKKVYWHTTSHILAQAVKRLFGDKVKLGIGPAIDNGFYYDFDVEESITMELLEKI 123

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E++MQ+II  D    +  LS E+A +L + K E YKVE++  IP  E ++ YRQGE+ DL
Sbjct: 124 EEEMQKIIKEDLKIERFELSREEAVKLMQEKGENYKVELINDIPEGETISFYRQGEFVDL 183

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPH+ STG+VK F KL+ VAGAYWRG+S   ML R+YG ++  + +L +YL  LEE++
Sbjct: 184 CTGPHLPSTGRVKAF-KLLSVAGAYWRGNSKNKMLQRVYGISYEKKSQLDEYLTMLEEAK 242

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           +RDHRKL RE+DLF I E+G G  F+  KG  I   L  + R + K   Y+EI TP +L 
Sbjct: 243 RRDHRKLGRELDLFDIFEEGPGFPFFLPKGMIIRNILEDFWREEHKKRGYQEIKTPIMLT 302

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW QSGHWD Y+ NM+  K  D      + FA+KPMNCPG + V+     SYRELP R
Sbjct: 303 KDLWVQSGHWDHYKENMYFTKIDD------QEFAIKPMNCPGSILVYKRKSHSYRELPER 356

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           L E G V+R+E SG LHGLMRVR FTQDDAH+F    Q+ +E   + +LI   Y  FGF 
Sbjct: 357 LCELGLVHRHELSGVLHGLMRVRCFTQDDAHIFMLPSQIKDEIKGVIDLIDYFYSVFGF- 415

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
           K  V+LSTRPE  +G+D  W+ AE  +K  L+ +       I+  +  G+GAFYGPK ++
Sbjct: 416 KYHVELSTRPEISMGTDEQWNMAETALKEALEEVG------IDYKINEGDGAFYGPKIDF 469

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L+D++ R WQC TIQ+DF +P RF+ +Y+     K  PVM+HR VFGSIERFI I+ E+
Sbjct: 470 HLEDSLKRTWQCATIQLDFQMPERFDLYYIGEDGAKHRPVMLHRVVFGSIERFIAILTEH 529

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           F G  P+WL+P Q  V  ++ +  +YA +I+  LK +   +E D+R+ET+ YKIR+  ++
Sbjct: 530 FAGAFPVWLAPTQIRVIPVSDNFNDYAAKISQTLKENGFRVEEDYRSETVGYKIRDAQLQ 589

Query: 602 KIPIIIICGDKEASERSIGIR 622
           KIP ++I G+KE  E +I +R
Sbjct: 590 KIPYMVIVGEKERRENTIAVR 610


>gi|172058202|ref|YP_001814662.1| threonyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
 gi|171990723|gb|ACB61645.1| threonyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
          Length = 646

 Score =  541 bits (1395), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 267/651 (41%), Positives = 408/651 (62%), Gaps = 21/651 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEI 61
           S+I LTFPDG++K F    T  +VA SIS  L KKA A  +NG+V D   P+ E GSIE+
Sbjct: 2   SNIALTFPDGAVKEFTAGTTAEEVAASISPGLRKKAFAAKLNGQVIDYRRPIEEDGSIEL 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPE--VQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           + P+    L +IRHS AH+MA+A++ ++P+  + + IGP IE+GFYYD D E+  + ++L
Sbjct: 62  VMPDSEEGLDLIRHSSAHLMAQAIKRLYPDETIHLGIGPTIENGFYYDIDMERRLTEEDL 121

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IEK M +I   + P  ++ +S ++A  +++   +  K+E++ESIPA +++T YRQGE+
Sbjct: 122 PEIEKMMNKIAGENLPIEREVVSRDEALAVYQELNDPLKIELIESIPADQDLTFYRQGEF 181

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPHV +T +++  FKLM +AGAYWRGDS   ML RIYGTAW  + +L Q+L+FL 
Sbjct: 182 FDLCRGPHVPATAKLQ-VFKLMSIAGAYWRGDSKNKMLQRIYGTAWANKDQLKQHLHFLA 240

Query: 240 ESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTP 297
           E+++RDHRKL +E+DLF  ++D G G+  W  KG  I +T+  Y+  ++++  YE + TP
Sbjct: 241 EAKERDHRKLGKELDLFFTSQDVGQGLPMWLPKGAAIRRTVERYIVDKELELGYEHVYTP 300

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    L++ SGHWD Y+ +MF     D+         L+PMNCP H+ ++ +  +SYR+
Sbjct: 301 VLGSVELYKTSGHWDHYQDDMFPKMEMDN-----EELVLRPMNCPHHMMIYKNEPRSYRD 355

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AE G ++R E SG+L GL RVR    +D H F   +QM  E   I +LI  +Y D
Sbjct: 356 LPLRVAELGGMHRYEMSGALTGLQRVRYMVLNDGHTFVRPDQMKEEFKAIVHLIQEVYAD 415

Query: 418 FGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           FG      +LS R     EK   +DA+W+ A+  +K  +D ++      +      GE A
Sbjct: 416 FGITDYKFRLSYRDPADKEKYFDNDAIWEMAQRELKETMDELE------LPYFEAEGEAA 469

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  ++ A+G+D    T+Q+DF LP RF   Y  +  +   PV++HR V  ++ER
Sbjct: 470 FYGPKLDVQVRTALGKDETLSTVQLDFLLPERFELTYKGNDGQDHRPVVLHRGVVSTMER 529

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           F+  +IE +KG  P WL+P+Q  +  ++S   +YA+EI  +L    + +ETDFR+E + Y
Sbjct: 530 FVAYLIEEYKGAFPTWLAPVQVKLIPVSSVHEDYAREIKTMLLKKGIRVETDFRDEKLGY 589

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +IRE  + K+P++++ GDKE   R + IRR+GS  +   SL   +  L +E
Sbjct: 590 RIREAQVNKVPVMLVLGDKEIEAREVNIRRYGSKDSSNASLEQFVSDLEQE 640


>gi|328947096|ref|YP_004364433.1| threonyl-tRNA synthetase [Treponema succinifaciens DSM 2489]
 gi|328447420|gb|AEB13136.1| threonyl-tRNA synthetase [Treponema succinifaciens DSM 2489]
          Length = 585

 Score =  541 bits (1394), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 270/575 (46%), Positives = 378/575 (65%), Gaps = 23/575 (4%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD--KEQPFSSDELAQIEKKMQ 127
           L  IRHSCAH+MAEAV +++P  ++AIGP IE+GFYYDFD  +     +++ A IEK+M+
Sbjct: 7   LQTIRHSCAHVMAEAVLNLFPGTKIAIGPAIENGFYYDFDFPEGHKVCAEDFASIEKEMR 66

Query: 128 EIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPH 187
           +II+ +  F+++ +S  +A ELF  K + YK E+++ +P  E +T Y Q  + DLCRGPH
Sbjct: 67  KIISGNHDFIRKEVSKSEALELF--KDQPYKEELIKELPEGEVITTYEQDGYLDLCRGPH 124

Query: 188 VRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDH 246
           V +T ++ ++ FKLM +AGAYW+GD  RPML+RIY   +    +L  Y+  LEE++KRDH
Sbjct: 125 VANTKEINQQSFKLMSIAGAYWKGDVKRPMLTRIYAVCFYKPNDLKDYITMLEEADKRDH 184

Query: 247 RKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLW 305
           RKL  ++DLFH+  +  G IFWH  GW ++ TL  YMR KI KD Y E+NTP ++ + LW
Sbjct: 185 RKLGVQLDLFHLDPEDPGQIFWHPNGWTMYVTLQDYMREKIRKDGYMEVNTPAIMPRSLW 244

Query: 306 QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEF 365
           ++SGHW  Y+ NMF       T  + R FA+KPMNCPG + +FN  ++SY++LP+RLAEF
Sbjct: 245 ERSGHWGHYQKNMFV------TESEKRMFAIKPMNCPGALEIFNSRVRSYKDLPLRLAEF 298

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK-IM 424
           G   RNEPSG+LHG+MRVRGF QDDAH+ CT++Q+ +E  K   L++ +YKDFGF+K ++
Sbjct: 299 GHCVRNEPSGTLHGIMRVRGFVQDDAHIICTEDQIESEVSKFCRLLLDVYKDFGFDKNLL 358

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           VKLST PE  VG    W  AE  +     +     +      +  GEGAFYGPK E+ L 
Sbjct: 359 VKLSTMPEDHVGDLETWQHAEKALAAACKSAGMEYE------IQPGEGAFYGPKLEFTLI 412

Query: 485 DAIGRDWQCGTIQVDFNLPS--RFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           DA+GR WQCGTIQ+D+ LPS  R NA Y+ + ++K HPVM+HRAV GS+ERF+GI+IEN+
Sbjct: 413 DALGRQWQCGTIQLDYQLPSAERLNAEYIGADNQKHHPVMLHRAVLGSLERFLGILIENY 472

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK- 601
            G  P WLS  Q  V  +      YA+++A+ LKS  +       +  +  KI+  S + 
Sbjct: 473 AGVFPAWLSFEQVAVVPVAPEFNAYAEKVADELKSLGVRANAYTDDSNMKNKIKNISTEH 532

Query: 602 KIPIIIICGDKEASERSIGIR-RFGSTTTQKVSLL 635
           + P I++ G+KE  E S+  R RF S   QK   L
Sbjct: 533 RTPYILVVGEKEQGENSVTCRFRFSSKIPQKTFAL 567


>gi|210623612|ref|ZP_03293938.1| hypothetical protein CLOHIR_01888 [Clostridium hiranonis DSM 13275]
 gi|210153482|gb|EEA84488.1| hypothetical protein CLOHIR_01888 [Clostridium hiranonis DSM 13275]
          Length = 638

 Score =  541 bits (1394), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 272/620 (43%), Positives = 397/620 (64%), Gaps = 17/620 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           IK++  +  +K F    +  DVA+SIS  LA+  VA  ++G+V  L   + ++ S+ ++ 
Sbjct: 2   IKVSLKN-DVKEFESGVSVLDVAKSISEGLARSIVAAEVDGEVVGLDTVLDKDCSVNLLK 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            ED     V RH+ +HI+A+A++ ++PE ++AIGP I++GFYYD D E     ++L  +E
Sbjct: 61  FEDKEGREVFRHTSSHILAQAIKRLYPEAKLAIGPAIDNGFYYDIDLEHSLVPEDLEALE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M++I   D    +  L  E+A +L + K E YKVE++E +P    ++ Y+QG++ DLC
Sbjct: 121 KEMKKIAKEDLKIERFELPREEAIKLMQEKGEDYKVELIEDLPEDAVISFYKQGDFTDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+ ST +VK   KL  VAGAYWRGD NR ML RIYG ++   ++L ++L+ LEE++K
Sbjct: 181 AGPHLLSTKKVKAV-KLTSVAGAYWRGDENRKMLQRIYGVSFEKNKDLEEHLHMLEEAKK 239

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +E+ LF I E+G G      KG  +   L+ Y R   +  +Y EI TP +L++
Sbjct: 240 RDHRKLGKELGLFMIPEEGPGFPLMLPKGMALKNALLEYWREVHRAAEYVEIETPIILNR 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW  Y+ NM+ VK       D   +A+KPMNCPG +  +   + SYR+ P+R+
Sbjct: 300 KLWETSGHWYHYKENMYTVKI------DEEDYAIKPMNCPGGMLYYKSEMHSYRDFPMRV 353

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AE G V+R+E SG+LHGLMRVR FTQDDAH+F   EQ+ +E   + +LI  IYK FGFE 
Sbjct: 354 AELGRVHRHELSGALHGLMRVRAFTQDDAHIFMLPEQIRDEIKGVISLIDGIYKTFGFE- 412

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             ++LSTRPE  +GSD  W+ AEN ++G L+ +       +   V  G+GAFYGPK ++ 
Sbjct: 413 YHLELSTRPEDSMGSDEEWEAAENGLRGALEELN------LPFVVNEGDGAFYGPKIDFH 466

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D IGR WQCGTIQ+D  LP +F+A Y+    EK  PVMIHR  FGSIERFIGI+IE +
Sbjct: 467 LTDCIGRTWQCGTIQLDMQLPRQFDATYIGQDGEKHRPVMIHRVAFGSIERFIGILIEQY 526

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P+WL+P Q  +  I+    +YA+++   L  + L +E D R E + +KIRE  ++K
Sbjct: 527 AGKFPVWLAPTQVKIIPISDKYADYAEKVRKELFDNGLRVEVDGRVEKVGFKIREAQLEK 586

Query: 603 IPIIIICGDKEASERSIGIR 622
           +P ++I G+KE +E +I +R
Sbjct: 587 VPYMVIVGEKEEAENNISVR 606


>gi|296187094|ref|ZP_06855492.1| threonyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|296048288|gb|EFG87724.1| threonyl-tRNA synthetase [Clostridium carboxidivorans P7]
          Length = 560

 Score =  541 bits (1393), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 260/543 (47%), Positives = 367/543 (67%), Gaps = 15/543 (2%)

Query: 81  MAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQY 140
           M + V+ ++PEV++AIGP I+ GFYYDFD E  F+ + L +IE +M +II  +    +  
Sbjct: 1   MLKLVKKVYPEVKLAIGPAIDTGFYYDFDAEFSFTPEMLEKIEVEMNKIIKENLKLERFE 60

Query: 141 LSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKL 200
           L  E+A +L + KKE YKVE+++ +P    ++ Y+QG++ DLC GPHV STG+VK   KL
Sbjct: 61  LPREEAIKLMQEKKECYKVELIKDLPEDAVISFYKQGDFVDLCAGPHVPSTGKVKAV-KL 119

Query: 201 MKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAE 260
           + +AGAYW+GD    ML RIYGTA+  + +L  YL  LEE++KRDHRKL +E+DLF + E
Sbjct: 120 LSIAGAYWKGDEKNKMLQRIYGTAFEKKADLDAYLNMLEEAKKRDHRKLGKELDLFSMHE 179

Query: 261 DGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMF 319
           +G G  F+H KG  I  TL ++ R      DY+EI TP +L++ LW+QSGHWD Y+ NM+
Sbjct: 180 EGPGFPFFHPKGMIIRNTLQNFWREMHSAADYDEIMTPVILNEKLWRQSGHWDHYKENMY 239

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHG 379
             K       D   +A+KPMNCPG + V+ + + SYRELP+R AE G  +R+E SG+LHG
Sbjct: 240 FTKI------DNEDYAIKPMNCPGSILVYKNTIHSYRELPLRYAEMGLAHRHEKSGALHG 293

Query: 380 LMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDA 439
           LMRVR FTQDDAH+F  K+ + +E + +  LI   YK FGFE   V+LSTRPE  +GSD 
Sbjct: 294 LMRVRCFTQDDAHMFLAKDNITDEIVNVIKLIDDFYKVFGFE-YFVELSTRPEDSMGSDE 352

Query: 440 LWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVD 499
            W+ A N ++  LDTI    + ++N G    +GAFYGPK ++ L+D IGR WQCGT+Q+D
Sbjct: 353 DWEAATNGLRKALDTI--GLKYKVNEG----DGAFYGPKIDFHLRDCIGRTWQCGTVQLD 406

Query: 500 FNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTT 559
           F +P RF+  Y+ +  EK  PVM+HR VFGS+ERFIGI+IE++ G  P WL+P+Q  +  
Sbjct: 407 FQMPERFDLTYIGADGEKHRPVMVHRVVFGSVERFIGILIEHYAGAFPAWLAPVQVKIMN 466

Query: 560 ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSI 619
           IT   ++YA ++A  LK + + +E D RNE I YKIRE  ++K+P +++ GDKE  E ++
Sbjct: 467 ITDDQIDYANKVAKELKKNKIRVEVDLRNEKIGYKIREAQLQKVPYMLVLGDKEMKENTV 526

Query: 620 GIR 622
            +R
Sbjct: 527 AVR 529


>gi|308513249|ref|YP_003474861.2| threonine--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5]
 gi|307346955|gb|ADC90325.2| threonine--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5]
          Length = 646

 Score =  541 bits (1393), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 268/620 (43%), Positives = 397/620 (64%), Gaps = 16/620 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +++T  DGS   F    + +++A  +S  LA+ A A  ++G++ DL   +  +  + I+T
Sbjct: 1   MQITLKDGSKIEFEQPMSIAEIARHLSEGLARVACAGEVDGELKDLRYVIDHDVHLNILT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D       RH+ +HI+A+AV+ ++P+ ++AIGP IE+GFYYDFD++ PF+ +EL  +E
Sbjct: 61  FDDEGGRHAFRHTASHILAQAVKRLYPDTKLAIGPAIENGFYYDFDRDHPFNDEELRALE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M++I+  + P     L  ++A  L E + E YKVE++  +PA   ++ Y QGE+ DLC
Sbjct: 121 AEMKKIVKENLPIKSFLLPRDEAIALMEKRGEPYKVELINDLPADAALSFYEQGEFVDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+ ST  VK F KL  +AGAYWRG     ML+RIYGTA+  Q +L  YL  LEE+++
Sbjct: 181 AGPHLASTKPVKAF-KLTSIAGAYWRGSEKNKMLTRIYGTAFPKQADLDDYLAKLEEAKR 239

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           RDHRKL +EM+LF  +E+G G  F+   G  +  TL+ Y R    ++DY EI+TP +L++
Sbjct: 240 RDHRKLGKEMNLFMFSEEGPGFPFFLPNGMILKNTLLDYWREVHRREDYREISTPIMLNR 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
           HLW+ SGHW  YR NM+       T+ D   FA+KPMNCPG +  F   + SYR+LP+RL
Sbjct: 300 HLWETSGHWFHYRDNMYT------TVIDDEDFAIKPMNCPGSMLTFKSTIHSYRDLPLRL 353

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AE G V+R+E SG LHGLMRVR FTQDDAH+F T +Q+ +E  ++  LI  +Y  F F K
Sbjct: 354 AELGLVHRHEKSGVLHGLMRVRAFTQDDAHIFMTPDQIRDEIKRVVRLIDEVYHHFNF-K 412

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             ++LSTRPE  +G+D  W+ A   ++  ++ +K      I   +  G+GAFYGPK ++ 
Sbjct: 413 YHIELSTRPEDSMGTDEEWNMATEALRLAVEDLK------IPYVINEGDGAFYGPKLDFH 466

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+D++GR WQCGTIQ+DF LP RF A Y+     +  P++IHR V GSIERFIGI+IE+ 
Sbjct: 467 LEDSLGRTWQCGTIQLDFQLPQRFEAEYIGPDGNRHRPIVIHRVVLGSIERFIGILIEHL 526

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P+Q  + +I+ +   Y  E+   LK+  +  E D RNE I +K+R   ++K
Sbjct: 527 AGKFPTWLAPVQVRILSISDNQNSYCSELLAELKNAGIRAEFDDRNEKIGFKVRAAQVEK 586

Query: 603 IPIIIICGDKEASERSIGIR 622
           IP ++I GD+E +E  + +R
Sbjct: 587 IPYMLIIGDQEMNEHRVSLR 606


>gi|46580942|ref|YP_011750.1| threonyl-tRNA synthetase [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120601757|ref|YP_966157.1| threonyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
 gi|81566250|sp|Q728R5|SYT_DESVH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|166987320|sp|A1VBB4|SYT_DESVV RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|46450362|gb|AAS97010.1| threonyl-tRNA synthetase [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120561986|gb|ABM27730.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Desulfovibrio
           vulgaris DP4]
 gi|311234632|gb|ADP87486.1| threonyl-tRNA synthetase [Desulfovibrio vulgaris RCH1]
          Length = 644

 Score =  540 bits (1392), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 271/641 (42%), Positives = 403/641 (62%), Gaps = 30/641 (4%)

Query: 21  ATGSDVAESISRSLA----KKAVAVAINGKVCDLSDPVREGS--IEIITPEDPRSLAVIR 74
           A+G+   +++  +L+    K  +A  ++G + D++  V +G+  IE +  + P  L +IR
Sbjct: 13  ASGASCGDALKGALSGKKFKNVLACRLDGGLVDITATVPDGTTTIEPVYADSPEGLDLIR 72

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDS 134
           HS AHIMA AV+ ++P  +V IGP I++GFYYDFD E+PFS ++   IE++MQ+I+   +
Sbjct: 73  HSTAHIMACAVKRLFPAAKVTIGPSIDNGFYYDFDAERPFSPEDFEAIEREMQKIVDAAT 132

Query: 135 PFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQV 194
           PF +  +  ++A  LFE   E YKVEI+  +P  + V+LYR GE+ DLCRGPH+   G  
Sbjct: 133 PFERSEMPRDEAVALFEGMGETYKVEIIRDLP-NDTVSLYRCGEFVDLCRGPHIPHAG-F 190

Query: 195 KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMD 254
            K FKLM VAGAYWRGD   PMLSRIYGTA+   + L ++L+ +EE+++RDHRKL +++D
Sbjct: 191 AKAFKLMSVAGAYWRGDEKNPMLSRIYGTAFADAKTLKEHLHRIEEAKRRDHRKLGQQLD 250

Query: 255 LFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWD 312
           LF   ED   G++FWH KG  +   +  ++R++ +K  Y+ +  PQ+L + LW++SGH+D
Sbjct: 251 LFAFHEDVAPGMVFWHPKGMLVRTIIEDFLRKEHLKRRYDIVQGPQLLRRELWEKSGHYD 310

Query: 313 SYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE 372
           +YR NM+  +       D   + +KPMNC  H+ ++   ++SYR+LP R  E G V+R+E
Sbjct: 311 NYRENMYFTEI------DENAYGVKPMNCLAHMLIYRSAIRSYRDLPKRFFELGVVHRHE 364

Query: 373 PSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
            SG LHGL+RVR FTQDDAH+ C  +Q+ +E + +  L+  +   FGF+   V +STRPE
Sbjct: 365 KSGVLHGLLRVRQFTQDDAHIICRPDQLEDEIIDVIALVRDLMNLFGFD-YKVAVSTRPE 423

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
           K +GSD  W+ A N +      +K   +  I   +  G+GAFYGPK +  L D IGR+WQ
Sbjct: 424 KSIGSDEAWELATNAL------VKAVERAGIPYTINEGDGAFYGPKIDVRLMDCIGREWQ 477

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
           C TIQ DF LP RF+  YV    E+  PVM+HRA+ GS+ERFIG++IE + G  P WL+P
Sbjct: 478 CSTIQCDFTLPERFDLVYVGQDGERHRPVMVHRAILGSLERFIGVLIEQYAGAFPAWLAP 537

Query: 553 IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
           +QA + T+T +  E+ +     L    + +E D RNE + YK+RE  ++KIP I++ GDK
Sbjct: 538 VQARLLTVTDAQNEFVESARAALAKAGIRVEADVRNEKLGYKVREAQLEKIPYILVVGDK 597

Query: 613 EASERSIGIR-RFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           E     + +R R G     K SL + + +L       DCQ+
Sbjct: 598 EVEAGGVNVRLRTGENLGLK-SLDEVVSLLES-----DCQE 632


>gi|255280775|ref|ZP_05345330.1| threonine--tRNA ligase [Bryantella formatexigens DSM 14469]
 gi|255268712|gb|EET61917.1| threonine--tRNA ligase [Bryantella formatexigens DSM 14469]
          Length = 642

 Score =  540 bits (1391), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 276/641 (43%), Positives = 401/641 (62%), Gaps = 18/641 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T  DG+ K +    T  ++A  IS  LA+ A A  ++G V DL   + R+  + I+T +
Sbjct: 3   ITLKDGTQKEYQQPMTILEIATDISEGLARAATAGEVDGNVEDLRTVIDRDCQLNILTFD 62

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
            P      RH+ +HIMA+A++ ++P+V++AIGP I DGFYYD D + P ++++L +IE +
Sbjct: 63  SPEGAGAFRHTTSHIMAQAIKRLYPDVKLAIGPSIADGFYYDIDSDTPLTAEDLEKIEAE 122

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M++I+    P  +     ++A   F+ K E YKVE++E +P    ++ Y+QGE+ DLC G
Sbjct: 123 MKKIVKEALPITRFTKPRDEAIAYFKEKNEPYKVELIEDLPEDAEISFYQQGEFVDLCAG 182

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PH+ ST  VK F KL  +AGAYWRG     ML+RIYGT++  + +L  Y+  +EE++KRD
Sbjct: 183 PHLMSTKPVKAF-KLTSLAGAYWRGSEKNKMLTRIYGTSFTKKADLEAYITRMEEAKKRD 241

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHL 304
           HRKL +++ LF + ++G G  F+   G  +   L+ Y R    K  Y EI+TP +L++ L
Sbjct: 242 HRKLGKQLGLFMMRDEGPGFPFFLPNGMIVKNALLDYWREIHRKAGYVEISTPIMLNRQL 301

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W+ SGHWD YR NM+       T+ D   FA+KPMNCPG + V+    +SYR+LP+R+ E
Sbjct: 302 WETSGHWDHYRENMYT------TVIDDTDFAIKPMNCPGGILVYQSEPRSYRDLPLRMGE 355

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
            G V+R+E SG LHGLMRVR F QDDAH+F T EQ+ +E   +  LI  +Y+ FGF K  
Sbjct: 356 IGLVHRHEKSGQLHGLMRVRCFNQDDAHIFMTPEQICDEIKGVVKLIDEVYQLFGF-KYH 414

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           V+LSTRPE  +GSD  W+ A + ++  LD +       ++  V  G+GAFYGPK ++ L+
Sbjct: 415 VELSTRPENSMGSDEDWEMATDGLRSALDDLG------LDYVVNEGDGAFYGPKIDFHLE 468

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D+IGR WQCGTIQ+DF LP RFN  Y+ +  EK  P+MIHR VFGS+ERFIGI+IE+F G
Sbjct: 469 DSIGRTWQCGTIQLDFQLPLRFNCEYIGADGEKHRPIMIHRVVFGSVERFIGILIEHFAG 528

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P WLSP Q  V  I+   ++YA ++   L  + +    D R E I YKIRE  + K+P
Sbjct: 529 AFPTWLSPEQVRVLPISDKYLDYADKVNAALNENGIRSSVDTRAEKIGYKIREARLAKVP 588

Query: 605 IIIICGDKEASERSIGIR-RFGSTTTQKVSLLDAIPILTKE 644
            +++ G KE  +  + +R RF     QK +L D I  + +E
Sbjct: 589 YMLVVGAKEEEDGKVSVRSRFLGDEGQK-NLDDFIAAIKEE 628


>gi|302871393|ref|YP_003840029.1| threonyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
 gi|302574252|gb|ADL42043.1| threonyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
          Length = 639

 Score =  540 bits (1390), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 279/621 (44%), Positives = 397/621 (63%), Gaps = 17/621 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I +T PDG +       +  +  ++IS  L K+AVA  I+G + DL   + ++ S E++T
Sbjct: 4   IAVTLPDGKVVEAEKGISALEFIKTISMKLYKEAVACRIDGVLKDLWTCLDKDCSFEVVT 63

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
                   V  H+ +HI+A+AV+ ++ + V++ IGP I+ GFYYDFD E+  + + L +I
Sbjct: 64  FSSDEGKKVYWHTTSHILAQAVKRLFGDKVKLGIGPAIDKGFYYDFDVEESITIEILEKI 123

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E++MQ+II  D    +  LS E+A +L + + E YKVE++  IP  E ++ YRQGE+ DL
Sbjct: 124 EQEMQKIIKEDLKIERFELSREEAIKLMQQRGENYKVELINDIPEGEIISFYRQGEFVDL 183

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPH+ STG+VK F KL+ VAGAYWRGDS   ML R+YG ++  + +L +YL  LEE++
Sbjct: 184 CTGPHLPSTGRVKAF-KLLSVAGAYWRGDSKNKMLQRVYGVSYEKKSQLDEYLTMLEEAK 242

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL RE+DLF I ++G G  F+  KG  I   L  + R + K   Y+EI TP +L 
Sbjct: 243 KRDHRKLGRELDLFDIFDEGPGFPFFLPKGMIIRNILEDFWREEHKRRGYQEIKTPIMLT 302

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW QSGHWD Y+ NM+  K  D      + FA+KPMNCPG + V+     SYRELP R
Sbjct: 303 KDLWIQSGHWDHYKENMYFTKIDD------QEFAIKPMNCPGSILVYKRKSHSYRELPQR 356

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           L E G V+R+E SG LHGLMRVR FTQDDAH+F    Q+ +E   + +LI   Y  FGF 
Sbjct: 357 LCELGLVHRHELSGVLHGLMRVRCFTQDDAHIFMLPSQIKDEIKGVIDLIDYFYSVFGF- 415

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
           K  V+LSTRPE  +G+D  W+ AE  +K  L+ +       IN  +  G+GAFYGPK ++
Sbjct: 416 KYHVELSTRPENSMGTDEQWNMAETALKEALEEVG------INYKINEGDGAFYGPKIDF 469

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L+D++ R WQC TIQ+DF +P RF+ +Y+     K  PVM+HR VFGSIERFI I+ E+
Sbjct: 470 HLEDSLKRTWQCATIQLDFQMPERFDLYYIGEDGAKHRPVMLHRVVFGSIERFIAILTEH 529

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           F G  P+WL+P Q  V  ++ +  +YA +I+  LK +   +E D+R+ET+ YKIR+  ++
Sbjct: 530 FAGAFPVWLAPTQIRVIPVSDNFNDYAAKISQTLKENGFRVEEDYRSETVGYKIRDAQLQ 589

Query: 602 KIPIIIICGDKEASERSIGIR 622
           KIP ++I G+KE  E +I +R
Sbjct: 590 KIPYMVIVGEKEQKENTIAVR 610


>gi|295105820|emb|CBL03363.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Gordonibacter
           pamelaeae 7-10-1-b]
          Length = 637

 Score =  540 bits (1390), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 272/623 (43%), Positives = 398/623 (63%), Gaps = 15/623 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           + +  PDGS K     AT +DVA SI   LAK A+A  +N +  DLS PV EG S+ I+T
Sbjct: 1   MDIVLPDGSGKELADGATVADVAASIGVGLAKAALAGIVNDQPVDLSAPVAEGDSVAIVT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +    L ++RHS AH+MA A+  ++ +VQ  +GP IE GFYYD    +  S D+ A IE
Sbjct: 61  AKSDEGLELLRHSTAHVMAAALVDLYGDVQFGVGPAIEGGFYYDVKTGRALSPDDFAAIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M EI+  D PF ++ ++  +A ++F    + +K+E++  +P    +T Y  G++ DLC
Sbjct: 121 ARMAEIVKADEPFERRVVTRAEAEDIF--ADQPFKLELIAELPEDAVITTYTIGKFTDLC 178

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG++  F KL K+AGAYWRGD+ R ML+RIYGTA+  Q+EL +++  LEE+EK
Sbjct: 179 RGPHLPSTGKLGAF-KLTKLAGAYWRGDAEREMLTRIYGTAFFKQKELDEHVRNLEEAEK 237

Query: 244 RDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLD 301
           RDHRKL RE+ ++ +    G+G+  +  KG +I +TL  ++RR +    YEE+ TP + +
Sbjct: 238 RDHRKLGRELGIYVMDPLAGAGLPLYLPKGARIIRTLQEWLRRDLYTRGYEEVITPHIYN 297

Query: 302 QHLWQQSGHWDSYRANM--FAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             +W+ SGH+  Y+ NM  F +   DD    +  +A+KPMNCPGHV ++   L SYR+LP
Sbjct: 298 ADVWKTSGHYGFYKENMYFFEINEGDDENPRMTEYAVKPMNCPGHVMLYKSELHSYRDLP 357

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R  EFG+VYR+E SG +HGL+R RGFTQDDAHVFCT++Q+ +E + I  L+  I   FG
Sbjct: 358 LRYFEFGTVYRHEMSGVVHGLLRARGFTQDDAHVFCTRDQVVDEVVAILGLVDHIMSTFG 417

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           FE    ++STRPEK +G+D +W+ A   +K      +   +  ++  +  G+GAFYGPK 
Sbjct: 418 FE-YEAEISTRPEKSIGTDDMWEHATGALK------EACERHGLSYDINEGDGAFYGPKI 470

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +  +KDAIGR WQC T+QVDFN+P RF   Y    + +  P M+HRA+FGSIERF+GI+I
Sbjct: 471 DIKVKDAIGRTWQCSTVQVDFNMPERFGLTYRTEDNTEERPWMLHRAIFGSIERFLGILI 530

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E++ G LPLWL+P+QA V  +     E A E+A  L      +E   +NE +  KI +  
Sbjct: 531 EHYAGALPLWLAPVQAAVLPLADRHNEAAHELALKLADAGGRVEVYDQNEPMRVKIAKAQ 590

Query: 600 IKKIPIIIICGDKEASERSIGIR 622
            +KIP +++ GDKE    ++ +R
Sbjct: 591 SQKIPYMVVLGDKEIENGTVSVR 613


>gi|16800662|ref|NP_470930.1| threonyl-tRNA synthetase [Listeria innocua Clip11262]
 gi|22654125|sp|Q92BF5|SYT_LISIN RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|16414081|emb|CAC96825.1| threonyl-tRNA synthetase [Listeria innocua Clip11262]
 gi|313618753|gb|EFR90658.1| threonyl-tRNA synthetase [Listeria innocua FSL S4-378]
          Length = 640

 Score =  539 bits (1389), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 268/638 (42%), Positives = 408/638 (63%), Gaps = 20/638 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           +K+TFPDG++K F    + +D+A SIS  L KKA+A  +NG++ DL  P+ E G+IEI+T
Sbjct: 1   MKITFPDGAVKEFEPGVSTADIAASISPGLKKKALAGKLNGELLDLVTPIHEDGAIEIVT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+   +L ++RHS AH+MA+A++ ++P+V+  +GP IE GFYYD D E   S + L +IE
Sbjct: 61  PDHEDALGILRHSTAHLMAQALKRLYPDVKFGVGPAIESGFYYDIDTEAVISDESLVEIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+MQ+I+  + P  ++ +S E+A + FE+  + YK+E++E+IP  E VT+Y QGE+FDLC
Sbjct: 121 KEMQKIVRENVPIEREVVSREEAIKRFEAIGDQYKLELIEAIPEDETVTIYTQGEFFDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RG HV STG++ + FKL+ VAGAYWRGDSN  ML RIYGTA+  +  L +++   +E+++
Sbjct: 181 RGVHVPSTGKI-QVFKLLSVAGAYWRGDSNNKMLQRIYGTAFFDKNGLKEFIQMQKEAKE 239

Query: 244 RDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLD 301
           RDHRKL +E+DLF +  E G G+  W  KG  I + +  Y+  ++ +  Y  + TP + +
Sbjct: 240 RDHRKLGKELDLFANSIEVGQGLPLWLPKGATIRRVIERYIVDKEERLGYNHVYTPIMAN 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             L++ SGHWD Y  +MF     D+         L+PMNCP H+ ++ + + SYRELP+R
Sbjct: 300 VELYKTSGHWDHYHEDMFPTMKMDN-----EELVLRPMNCPHHMMIYKNDIHSYRELPIR 354

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AE G ++R E SG+L GL RVRG T +DAHVF   +Q+ +E  ++  LI+ +YKDF  +
Sbjct: 355 IAELGMMHRYEMSGALSGLQRVRGMTLNDAHVFVRPDQIKDEFKRVVELILEVYKDFDIK 414

Query: 422 KIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
               +LS R     EK    DA+W+ A+ ++K  +D +   + D        GE AFYGP
Sbjct: 415 DYSFRLSYRDPKNTEKYFDDDAMWEKAQAMLKSAMDEM---NMDYFEAE---GEAAFYGP 468

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  +K AIG++    T+Q+DF LP RF+  Y+    EK  PV+IHR V  ++ERF+  
Sbjct: 469 KLDVQVKTAIGKEETLSTVQLDFLLPERFDLTYIGEDGEKHRPVVIHRGVVSTMERFVAY 528

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +IE +KG  P WL+P+Q  +  + + A ++YA+ + + L+   L  E D RNE + YKIR
Sbjct: 529 LIEEYKGAFPTWLAPVQMELIPVNADAHLDYAKGVQDKLQRAGLRAEVDDRNEKLGYKIR 588

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           E   KKIP  ++ GD+E    S+ +RR+GS  ++ + L
Sbjct: 589 EAQTKKIPYALVLGDQEVEAGSVNVRRYGSKDSETMDL 626


>gi|289523104|ref|ZP_06439958.1| threonine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
 gi|289503647|gb|EFD24811.1| threonine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
          Length = 624

 Score =  539 bits (1389), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 262/618 (42%), Positives = 396/618 (64%), Gaps = 17/618 (2%)

Query: 32  RSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWP 90
           R +  K +AV I+GK+CDL   V E  +IE +  + P  + ++RHS +H+MA+AV  ++ 
Sbjct: 17  RGIDGKVIAVKIDGKLCDLDTTVEENANIEPVEIDSPEGIEILRHSTSHLMAQAVYRLYH 76

Query: 91  EVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELF 150
             +  +GP IE+GFYYD D     + D+L +IE++M++I A   PF +  +S ++A  +F
Sbjct: 77  GTKYGVGPAIENGFYYDMDVPTTITEDDLPKIEEEMKKIAAEAIPFERLIVSKDEAIGIF 136

Query: 151 ESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRG 210
           + + + YK+E+++ I   + ++LY+ GE+ DLCRGPHV +T  +K F KL+ VAGAYWRG
Sbjct: 137 KERGDTYKLELIDGI-EDDTLSLYKVGEFIDLCRGPHVPNTSYLKHF-KLLSVAGAYWRG 194

Query: 211 DSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHR 270
           D   PML+RIYGTA+ T+++L  YL  +EE+++RDHR+L +E+D+F +  +  G  F+H 
Sbjct: 195 DERNPMLTRIYGTAFPTEEDLLAYLAKVEEAKRRDHRRLGKELDIFSMQSEAPGFPFFHP 254

Query: 271 KGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
           KG  +   L+ + R+  ++  Y+EI TP +LDQ LW +SGHWD YR NM+  +       
Sbjct: 255 KGVVVLNVLVDFWRKVHVQRGYQEIKTPLILDQDLWIRSGHWDHYRENMYFTEI------ 308

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
           D + FA+KPMNCPG + V+   L+SYR+ P++LAE G V+R+E SG LHGLMRVR FTQD
Sbjct: 309 DGKPFAIKPMNCPGGILVYKSQLRSYRDFPLKLAELGVVHRHERSGVLHGLMRVRCFTQD 368

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMK 449
           DAH+F T++ +  E + I N++  IY  FGF    V+LSTRPE  +G  ALWD AE  ++
Sbjct: 369 DAHIFTTEDHIKEEIIDIMNIVKYIYGVFGF-PYHVELSTRPENAMGEKALWDRAEQALQ 427

Query: 450 GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAF 509
             LD      + ++N G    +GAFYGPK ++ L+D IGR WQCGTIQ+DF +P +F+  
Sbjct: 428 EALD--DQGVEYKLNPG----DGAFYGPKIDFHLEDCIGRTWQCGTIQLDFQMPEKFDIT 481

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQ 569
           Y+    E   PVMIHR V GS+ERF+GI+IE + G  P WL+P+Q  +  ++   + YA+
Sbjct: 482 YIGPDGEPHRPVMIHRTVLGSLERFLGILIEQYAGAFPYWLAPVQVKILPVSDEHLTYAK 541

Query: 570 EIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
            +A+LL+   + +E D +  T+  KIR+  ++K P +II G++E     + +R       
Sbjct: 542 NVASLLQKQDVRVEVDRKEGTLGKKIRDAQMQKTPYMIIIGNREVENEVVSVRDRSKGDL 601

Query: 630 QKVSLLDAIPILTKESLP 647
             +SL     +L+ E  P
Sbjct: 602 GSMSLEALKELLSNEYYP 619


>gi|311031377|ref|ZP_07709467.1| threonyl-tRNA synthetase [Bacillus sp. m3-13]
          Length = 643

 Score =  539 bits (1389), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 262/653 (40%), Positives = 419/653 (64%), Gaps = 20/653 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           M   +K+TFPDG++K F    T  D+A SIS  L KKA+A  +NG++ DL  P+  +G I
Sbjct: 1   MSELMKITFPDGAVKEFERGTTTEDIAASISPGLKKKAIAGKLNGELIDLRSPINIDGEI 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            II  +   +L ++RHS AH+MA+A++ ++  V++ IGP+IE+GFYYD D E+  + ++L
Sbjct: 61  SIIMQDSDEALGIMRHSTAHLMAQAIKRLYGNVKLGIGPVIENGFYYDIDLEESLTPEDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IEK+M++I++ +   ++  +S E+A   +E   +  K+E++  +P  E +++Y QGE+
Sbjct: 121 QKIEKEMKKIVSENLDVVRVEVSREEALRRYEELNDELKLELIRELPEGETISIYEQGEF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRG HV STG++K+ FKL+ +AGAYWRGDS   ML RIYGTA+  + EL ++L  LE
Sbjct: 181 FDLCRGIHVPSTGKIKE-FKLLSIAGAYWRGDSKNKMLQRIYGTAFFKKAELDEHLRLLE 239

Query: 240 ESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTP 297
           E+++RDHRK+ +E+DLF  ++  G G+  W  KG  I + +  Y+  ++++  Y+ + TP
Sbjct: 240 EAKERDHRKIGKELDLFFNSQKVGQGLPLWLPKGATIRRVIERYIVDKEVELGYDHVYTP 299

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    L++ SGHWD Y+  MF     D+         L+PMNCP H+ V+ + + SYR+
Sbjct: 300 VMGSVELYKTSGHWDHYQDGMFPPMEMDN-----EQLVLRPMNCPHHMMVYKNSIHSYRQ 354

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LPVR+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+ +E  ++ NL++ +YKD
Sbjct: 355 LPVRIAELGTMHRYEMSGALAGLQRVRGMTLNDAHIFVRPDQIKDELKRVVNLVLEVYKD 414

Query: 418 FGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           FG +    +LS R     EK    DA+W+ A+ ++K  +D +     + I+      E A
Sbjct: 415 FGLDDYSFRLSYRDPENKEKYFDDDAMWEKAQGMLKEAMDELGLDYFEAID------EAA 468

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  ++ A+G++    T+Q+DF LP +F+  YV    ++  PV+IHR V  ++ER
Sbjct: 469 FYGPKLDVQVRTALGKEETLSTVQLDFLLPEKFDLTYVGEDGKQHRPVVIHRGVVSTMER 528

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETIN 592
           F+  +IE +KG  P WL+P+Q  V  ++  A  +YA+E+ +LLKS  + +E D RNE I 
Sbjct: 529 FVAFLIEEYKGAFPTWLAPVQVQVIPVSPDAHFDYAKEVQDLLKSKGIRVEMDERNEKIG 588

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           YKIRE  ++KIP +++ GD E  ER++ +R++G   ++ +SL   +  L KE+
Sbjct: 589 YKIREAQMQKIPYMLVLGDNEIQERAVNVRKYGEQKSETISLEKFVDDLLKEA 641


>gi|312622904|ref|YP_004024517.1| threonyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002]
 gi|312203371|gb|ADQ46698.1| threonyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002]
          Length = 639

 Score =  539 bits (1388), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 277/621 (44%), Positives = 399/621 (64%), Gaps = 17/621 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDL-SDPVREGSIEIIT 63
           I +T PDG         +  +  ++IS  L K+AVA  I+G + DL +   ++ S E++T
Sbjct: 4   ITVTLPDGKAVEAEKGISAMEFIKTISMRLYKEAVACKIDGVLKDLWTSLQKDCSFEVVT 63

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
             +     V  H+ +HI+A+AV+ ++ + V++ IGP I++GFYYDFD E+  + + L +I
Sbjct: 64  FSNDEGKKVYWHTTSHILAQAVKRLFGDKVKLGIGPAIDNGFYYDFDIEESITREILEKI 123

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E++MQ+II  D    +  LS E+A +L + + E YKVE++  IP  E ++ Y+QGE+ DL
Sbjct: 124 EEEMQKIIKEDLKIERFELSREEAIKLMQQRGENYKVELINDIPEGEVISFYKQGEFVDL 183

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPH+ STG+VK F KL+ VAGAYWRG+S   ML RIYG ++  + +L +YL  LEE++
Sbjct: 184 CTGPHLPSTGRVKAF-KLLSVAGAYWRGNSKNKMLQRIYGISYEKKSQLDEYLTMLEEAK 242

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL RE+DLF I E+G G  F+  KG  I   L  + R + K   Y+EI TP +L 
Sbjct: 243 KRDHRKLGRELDLFDIFEEGPGFPFFLPKGMIIRNILEDFWREEHKKRGYQEIKTPIMLT 302

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW QSGHWD Y+ NM+  K  D      + FA+KPMNCPG + V+     SYRELP R
Sbjct: 303 KDLWVQSGHWDHYKGNMYFTKIDD------QEFAIKPMNCPGSILVYKRKSHSYRELPER 356

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           L E G V+R+E SG LHGLMRVR FTQDDAH+F    Q+ +E   + +LI   Y  FGF 
Sbjct: 357 LCELGLVHRHELSGVLHGLMRVRCFTQDDAHIFMLPSQIKDEIKGVIDLIDYFYSVFGF- 415

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
           K  V+LSTRPE  +G+D  W+ AE  +K  L+ +       I+  +  G+GAFYGPK ++
Sbjct: 416 KYHVELSTRPENSMGTDEQWNMAETALKEALEEVG------IDYKINEGDGAFYGPKIDF 469

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L+D++ R WQC TIQ+DF +P RF+ +Y+     K  PVM+HR VFGSIERFI I+ E+
Sbjct: 470 HLEDSLKRTWQCATIQLDFQMPERFDLYYIGEDGAKHRPVMLHRVVFGSIERFIAILTEH 529

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           F G  P+WL+P Q  +  ++ +  +YA +I+ +LK +   +E DFR+ET+ YKIR+  ++
Sbjct: 530 FAGAFPVWLAPTQIRIIPVSDNFNDYAAKISQILKENGFRVEEDFRSETVGYKIRDAQLQ 589

Query: 602 KIPIIIICGDKEASERSIGIR 622
           KIP ++I G+KE  + +I +R
Sbjct: 590 KIPYMVIVGEKEQRDNTIAVR 610


>gi|116328741|ref|YP_798461.1| threonine--tRNA ligase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116331652|ref|YP_801370.1| threonine--tRNA ligase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|122280605|sp|Q04R58|SYT_LEPBJ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|122283474|sp|Q04ZG7|SYT_LEPBL RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|116121485|gb|ABJ79528.1| Threonine--tRNA ligase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116125341|gb|ABJ76612.1| Threonine--tRNA ligase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 639

 Score =  539 bits (1388), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 274/635 (43%), Positives = 402/635 (63%), Gaps = 21/635 (3%)

Query: 6   KLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGK-VCDLSDPVR-EGSIEIIT 63
           +LT PD S+K   + +T  D  E     L  KA+AV +NGK + DLS  V  + +IE++T
Sbjct: 3   QLTLPDKSVKKVALGSTYRDFIEKELPFLKNKALAVRLNGKDIQDLSRVVETDANIEVLT 62

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG---FYYDFDKEQPF-SSDEL 119
             +       +HS AH++  AVQ+++    + +GP+IE+G   FYYD D +    + ++ 
Sbjct: 63  YTEKAGWETFQHSAAHLLGMAVQNLYKNANLTVGPVIENGPGFFYYDIDFQGTIITPEDF 122

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IE +M+ I+  D    ++ +  ++A E F+   E YK+EI+  I ++E V++Y  GEW
Sbjct: 123 PKIEAEMERIVKADYTVWRKVVPKKEAIETFQKLGEKYKIEIIGGILSEE-VSIYGMGEW 181

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPHV ++G +K F KL  ++GAYW+ D +  ML+RIYG A+ +++EL QYL+ +E
Sbjct: 182 FDLCRGPHVSNSGILKSF-KLTAISGAYWKADKDNAMLTRIYGVAFPSKKELDQYLFQIE 240

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E++KRDHRK+ +E+DLF   ++G G  FWH KG  ++ +L  Y+R +  K  Y+EI TP 
Sbjct: 241 EAKKRDHRKIGKELDLFSFQKEGPGFPFWHPKGTILWNSLADYLRAECNKRGYQEIKTPA 300

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           VL   LW++SGHWD++  NM+          D   +ALKPMNCPG   ++ H L SYREL
Sbjct: 301 VLSSELWKKSGHWDNFHENMYFTDI------DEEDYALKPMNCPGCSLIYKHHLHSYREL 354

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R AEFGSV+R+E  G LHGL RVR FTQDD+H++   E + +E   I +   ++YK F
Sbjct: 355 PLRFAEFGSVHRHELHGVLHGLFRVRAFTQDDSHIYAPLEHLESEVTDIIDFTFTVYKKF 414

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF +    ++TRPEK  G D  W+ A N +K  L+      +  I  G+  GEGAFYGPK
Sbjct: 415 GFSEFKTFIATRPEKSQGRDEDWEFATNTLKQSLE------KKGIPYGIKEGEGAFYGPK 468

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ +KD+IGR WQCGTIQVDF++P RF   Y +S  +K  PVMIHRA++GS+ERFIGI+
Sbjct: 469 IEFNIKDSIGRLWQCGTIQVDFSMPERFELDYTDSDGQKKRPVMIHRAIYGSLERFIGIL 528

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+++G  PLW+SP Q  + TIT    EYA+++   L      +E D RNE I  KIR+ 
Sbjct: 529 IEHYEGKFPLWISPNQIRILTITEKVAEYAKDVYCELVDAGFRVELDTRNEKIGAKIRDS 588

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            +KK   ++I G+KE    ++ +R+ G   T+ ++
Sbjct: 589 ILKKANYLLILGEKEMESGTLAVRKRGQEDTKTLT 623


>gi|313623625|gb|EFR93788.1| threonyl-tRNA synthetase [Listeria innocua FSL J1-023]
          Length = 640

 Score =  539 bits (1388), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 267/638 (41%), Positives = 408/638 (63%), Gaps = 20/638 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           +K+TFPDG++K F    + +D+A SIS  L KKA+A  +NG++ DL  P+ E G+IEI+T
Sbjct: 1   MKITFPDGAVKEFEPGVSTADIAASISPGLKKKALAGKLNGELLDLVTPIHEDGAIEIVT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+   +L ++RHS AH+MA+A++ ++P+V+  +GP IE GFYYD D E   S + L +IE
Sbjct: 61  PDHEDALGILRHSTAHLMAQALKRLYPDVKFGVGPAIESGFYYDIDTEAVISDESLVEIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+MQ+I+  + P  ++ +S E+A + FE+  + YK+E++E+IP  E VT+Y QGE+FDLC
Sbjct: 121 KEMQKIVRENVPIEREVVSREEAIKRFEAIGDQYKLELIEAIPEDETVTIYTQGEFFDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RG HV STG++ + FKL+ VAGAYWRGDSN  ML RIYGTA+  +  L +++   +E+++
Sbjct: 181 RGVHVPSTGKI-QVFKLLSVAGAYWRGDSNNKMLQRIYGTAFFDKNGLKEFIQMQKEAKE 239

Query: 244 RDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLD 301
           RDHRKL +E+DLF +  E G G+  W  KG  I + +  Y+  ++ +  Y  + TP + +
Sbjct: 240 RDHRKLGKELDLFANSIEVGQGLPLWLPKGATIRRVIERYIVDKEERLGYNHVYTPIMAN 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             L++ SGHWD Y  +MF     D+         L+PMNCP H+ ++ + + SYRELP+R
Sbjct: 300 VELYKTSGHWDHYHEDMFPTMKMDN-----EELVLRPMNCPHHMMIYKNDIHSYRELPIR 354

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AE G ++R E SG+L GL RVRG T +DAHVF   +Q+ +E  ++  LI+ +YKDF  +
Sbjct: 355 IAELGMMHRYEMSGALSGLQRVRGMTLNDAHVFVRPDQIKDEFKRVVELILEVYKDFDIK 414

Query: 422 KIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
               +LS R     EK    DA+W+ A+ ++K  +D +       ++     GE AFYGP
Sbjct: 415 DYSFRLSYRDPKNTEKYFDDDAMWEKAQAMLKSAMDEM------HMDYFEAEGEAAFYGP 468

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  +K AIG++    T+Q+DF LP RF+  Y+    EK  PV+IHR V  ++ERF+  
Sbjct: 469 KLDVQVKTAIGKEETLSTVQLDFLLPERFDLTYIGEDGEKHRPVVIHRGVVSTMERFVAY 528

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +IE +KG  P WL+P+Q  +  + + A ++YA+ + + L+   L  E D RNE + YKIR
Sbjct: 529 LIEEYKGAFPTWLAPVQMELIPVNADAHLDYAKGVQDKLQRAGLRAEVDDRNEKLGYKIR 588

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           E   KKIP  ++ GD+E    S+ +RR+GS  ++ + L
Sbjct: 589 EAQTKKIPYALVLGDQEVEAGSVNVRRYGSKDSETMDL 626


>gi|312134685|ref|YP_004002023.1| threonyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
 gi|311774736|gb|ADQ04223.1| threonyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
          Length = 639

 Score =  538 bits (1387), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 277/621 (44%), Positives = 400/621 (64%), Gaps = 17/621 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I +T PDG +       T  +  ++IS  L K+AVA  I+G + DL   + ++ S E++T
Sbjct: 4   IAVTLPDGKVVEAEKGITALEFIKTISMKLYKEAVACRIDGVLKDLWTCLDKDCSFEVVT 63

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
                   V  H+ +HI+A+AV+ ++ + V++ IGP I+ GFYYDFD E+  +++ L +I
Sbjct: 64  FSSDEGKKVYWHTSSHILAQAVKRLFGDRVKLGIGPAIDRGFYYDFDIEESITNEILQKI 123

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E++MQ+II  D    +  L+ ++A +L + + E YKVE++  IP  E ++ Y+QGE+ DL
Sbjct: 124 EQEMQKIIKEDLKIERFELTRDEAIKLMQERGEPYKVELINDIPEGETISFYKQGEFIDL 183

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPH+ STG+VK F KL+ VAGAYWRGDS   ML R+YG ++  + +L +YL  LEE++
Sbjct: 184 CTGPHLPSTGKVKAF-KLLSVAGAYWRGDSKNKMLQRVYGISYEKKSQLDEYLTMLEEAK 242

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL RE+DLF I ++G G  F+  KG  I   L  + R + K   Y+EI TP +L 
Sbjct: 243 KRDHRKLGRELDLFDIFDEGPGFPFFLPKGMIIRNILEDFWREEHKKRGYQEIKTPIMLT 302

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW QSGHWD Y+ NM+  K  D      + FA+KPMNCPG + V+     SYRELP R
Sbjct: 303 KELWIQSGHWDHYKENMYFTKIDD------QEFAIKPMNCPGGILVYKRKSHSYRELPQR 356

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           L E G V+R+E SG LHGLMRVR FTQDDAH+F    Q+ +E   + +LI   Y  FGF 
Sbjct: 357 LCELGLVHRHELSGVLHGLMRVRCFTQDDAHIFMLPSQIKDEIKGVIDLIDYFYNVFGF- 415

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
           K  V+LSTRPE  +G+D  W+ AE+ +K  L+ I  S   +IN G    +GAFYGPK ++
Sbjct: 416 KYHVELSTRPENSMGTDEQWNMAESALKEALEEIGISY--KINEG----DGAFYGPKIDF 469

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L+D++ R WQC TIQ+DF +P RF+ +Y+     K  PVM+HR VFGSIERFI I+ E+
Sbjct: 470 HLEDSLKRTWQCATIQLDFQMPERFDLYYIGEDGAKHRPVMLHRVVFGSIERFIAILTEH 529

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           F G  P+WL+P Q  V  ++ +   YA +++ +LK +   +E D+R+ET+ YKIR+  ++
Sbjct: 530 FGGAFPVWLAPTQVRVIPVSDNFNNYAAKVSQILKENGFRVEEDYRSETVGYKIRDAQLQ 589

Query: 602 KIPIIIICGDKEASERSIGIR 622
           KIP ++I G+KE  E ++ +R
Sbjct: 590 KIPYMVIVGEKEQKENTVAVR 610


>gi|283851379|ref|ZP_06368661.1| threonyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
 gi|283573329|gb|EFC21307.1| threonyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
          Length = 647

 Score =  538 bits (1387), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 269/652 (41%), Positives = 408/652 (62%), Gaps = 23/652 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS--IEII 62
           +++T  D S++     + G  ++ +IS    K +VA  +NG+  D++ P+ E +  +E +
Sbjct: 1   MQVTIEDTSLEAAAGESCGQVLSRAISGKRFKNSVACLVNGQPVDMTAPLPEDARELEPV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
             + P  L++IRHS AHIMAEAV+ ++P VQV IGP IE+GFYYDF  E+PF+ ++L  I
Sbjct: 61  AVDSPLGLSIIRHSAAHIMAEAVKKLFPSVQVTIGPAIENGFYYDFAFERPFTPEDLEAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M+  IA + PF   Y+    A+ LF S+ E+YK+EI++     + V+LYR G + DL
Sbjct: 121 EAEMRASIAANHPFSCTYVPKADAKALFASQGESYKLEIMDENIVGDTVSLYRHGLFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +TG V+   KL+ VAGAYWRGD  RPML RIYGTA+ ++ +L  YL  LEE++
Sbjct: 181 CRGPHVPTTGMVRAV-KLLSVAGAYWRGDEKRPMLQRIYGTAFASEADLKTYLKHLEEAK 239

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVL 300
           KRDHRKL  ++DLF  +E+ G+G+  WH KG  +   L  + RR+ +K  Y  +  P +L
Sbjct: 240 KRDHRKLGTQLDLFSFSEEVGAGMPIWHPKGELVRTILEDFERREHLKRGYSLVRGPLIL 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            + LW++SGH+D+YR NM+  +       D +++ +KPMNC  H+ ++   ++SYR+LP 
Sbjct: 300 RRELWERSGHYDNYRENMYFTEI------DEQSYGIKPMNCLAHMLIYKSRIRSYRDLPQ 353

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R  E G V+R+E SG LHGL+RVR FTQDDAH+ C  +Q+  E   +   +  +   FGF
Sbjct: 354 RYFELGVVHRHEKSGVLHGLLRVRQFTQDDAHILCRPDQLLEEITGVIKFVQDVVGLFGF 413

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           +   V+LSTRPEK +G+D  W+ A   +   L+++       +   +  G+GAFYGPK +
Sbjct: 414 D-YEVELSTRPEKSIGADEDWERATKALTDALESLG------LPYDINEGDGAFYGPKID 466

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
             LKDA+ R WQC T+Q DF LP RF+  Y ++  E+  PVM+HR + G++ERF+G++IE
Sbjct: 467 IKLKDALERRWQCATVQCDFTLPDRFDLVYTDADGERKRPVMLHRVILGAVERFLGVLIE 526

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +  G LP WL+P+QA +  +T +  E+A++    L    +  E D RNE + +K+RE  +
Sbjct: 527 HTAGALPTWLAPVQARILIVTDAQKEFAEQALARLLEAGIRAELDDRNEKLGFKVREAQV 586

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           +KIP +++ GDKE     + + R  S     V  LD + +L    +  DCQ+
Sbjct: 587 EKIPYMLVAGDKEKELGGLNV-RLRSGDNLGVKTLDEVVLL----ITADCQE 633


>gi|325295461|ref|YP_004281975.1| threonyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM
           11699]
 gi|325065909|gb|ADY73916.1| threonyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM
           11699]
          Length = 658

 Score =  538 bits (1387), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 277/667 (41%), Positives = 420/667 (62%), Gaps = 35/667 (5%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I++  PDGS   F    +  ++A  I++SL K AV    NG++ D+  P+ R G I+IIT
Sbjct: 2   IEIELPDGSKLTFEGKTSVKEIAGKIAKSLEKNAVGAFFNGELIDIHTPIERSGKIKIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIW--PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
            +DP SL V+RHS AHI+A+AV+ ++   +V++ IGP   +GFYYDFD     S ++L++
Sbjct: 62  QKDPESLEVLRHSVAHILAKAVKRVYGKDKVKLGIGPATNEGFYYDFDLPTSISEEDLSK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE-WF 180
           +E +M++II     F ++ ++ E+A ELF  K + YK E+L+SI   E +T+Y  GE +F
Sbjct: 122 LEAEMEKIIKAKETFRREEITREQALELF--KDDPYKTELLDSISENEKITIYWLGEDFF 179

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLC+GPH+   G VK F KL+ VAGAYWRGDS   ML RIYGTA+  ++EL +YL+ LEE
Sbjct: 180 DLCKGPHIEHAGMVKAF-KLLSVAGAYWRGDSKNKMLQRIYGTAFWKKKELEEYLHRLEE 238

Query: 241 SEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQ 298
           ++KRDHR L +++DLF I E+ GSG++FWH  G  I + +  ++ ++  K  Y+ I TP 
Sbjct: 239 AKKRDHRVLGKQLDLFSIYEEAGSGLVFWHPNGAIIRREIEEWVEKEHEKRGYQRIYTPH 298

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCAD----------------DTIKDLRTFALKPMNCP 342
           ++   LW+ SGH+D Y+ NMF V   +                + ++    +A+KPMNCP
Sbjct: 299 IMKADLWKISGHYDFYKENMFFVPVVEHDEEEKLGNEKVPLTCEEVERANWYAVKPMNCP 358

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN 402
           GH+ ++    +SY++LP+R  EFG+V+R E SGSLHGL+RVRGFTQDD H+FC  +Q+ +
Sbjct: 359 GHILIYKSQPRSYKDLPLRFFEFGTVHRYEKSGSLHGLLRVRGFTQDDGHIFCRPDQLKD 418

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
           E L + + ++ +   F  + + + + T+PEK +GSD  W+ A    + ++D +K      
Sbjct: 419 EILGVLDYVMELLSVFKLDYV-INIGTKPEKYIGSDEAWEHA---TQALIDALKERG--- 471

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
           +   ++ G+GAFYGPK +  + DAIGR W   TIQVDFNLP RF+  YV+   EK  PVM
Sbjct: 472 LEYNIVEGDGAFYGPKIDIAVLDAIGRKWDGPTIQVDFNLPERFDLTYVDRDGEKKRPVM 531

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSI 582
           +HRA+ GSIERFIG++IE++ G  PLWL+P Q +V  ++   + YA+ +   LK   +  
Sbjct: 532 VHRAIMGSIERFIGLLIEHYAGLFPLWLAPTQVVVIPVSDKYINYAENVFRKLKEVGIRA 591

Query: 583 ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR--RFGSTTTQKVS-LLDAIP 639
           + D  +  + YKIR+  + KIP ++I G+KE    ++ +R  + G   + ++S  LD I 
Sbjct: 592 KLDDESGKVGYKIRKAELLKIPYMVIVGEKEQESNTVSVRSKKEGDLGSMEISNFLDKIL 651

Query: 640 ILTKESL 646
              KE L
Sbjct: 652 TEIKEKL 658


>gi|254831960|ref|ZP_05236615.1| threonyl-tRNA synthetase [Listeria monocytogenes 10403S]
          Length = 640

 Score =  538 bits (1385), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 266/638 (41%), Positives = 409/638 (64%), Gaps = 20/638 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           +K+TFPDG++K F    + +D+A SIS  L KKA+A  +NG++ DL  P+ E G+IEI+T
Sbjct: 1   MKITFPDGAVKEFEPGVSTADIAASISPGLKKKALAGKLNGELLDLVTPIHEDGAIEIVT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+   +L ++RHS AH+MA+A++ ++P+V+  +GP IE GFYYD D E   S + L +IE
Sbjct: 61  PDHEDALGILRHSTAHLMAQALKRLYPDVKFGVGPAIESGFYYDIDTEAVISDESLVEIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+MQ+I+  + P  ++ +S E+A + F++  + YK+E++E+IP  E VT+Y QGE+FDLC
Sbjct: 121 KEMQKIVRENVPIEREVVSREEAIKRFKAIGDQYKLELIEAIPEDETVTIYTQGEFFDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RG HV STG++ + FKL+ VAGAYWRGDSN  ML RIYGTA+  +  L +++   +E+++
Sbjct: 181 RGVHVPSTGKI-QVFKLLSVAGAYWRGDSNNKMLQRIYGTAFFDKNGLKEFIQMQKEAKE 239

Query: 244 RDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLD 301
           RDHRKL +E+DLF +  E G G+  W  KG  I + +  Y+  ++ +  Y  + TP + +
Sbjct: 240 RDHRKLGKELDLFANSIEVGQGLPLWLPKGATIRRVIERYIVDKEERLGYNHVYTPIMAN 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             L++ SGHWD Y  +MF     D+         L+PMNCP H+ ++ + + SYRELP+R
Sbjct: 300 VELYKTSGHWDHYHEDMFPTMKMDN-----EELVLRPMNCPHHMMIYKNDIHSYRELPIR 354

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AE G ++R E SG+L GL RVRG T +DAHVF   +Q+ +E  ++  LI+ +YKDF  +
Sbjct: 355 IAELGMMHRYEMSGALSGLQRVRGMTLNDAHVFVRPDQIKDEFKRVVELILEVYKDFDIK 414

Query: 422 KIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
               +LS R     EK    DA+W+ A+ ++K  +D ++      ++     GE AFYGP
Sbjct: 415 DYSFRLSYRDPKNTEKYFDDDAMWEKAQAMLKSAMDEME------MDYFEAEGEAAFYGP 468

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  +K AIG++    T+Q+DF LP RF+  Y+    EK  PV+IHR V  ++ERF+  
Sbjct: 469 KLDVQVKTAIGKEETLSTVQLDFLLPERFDLTYIGEDGEKHRPVVIHRGVVSTMERFVAY 528

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +IE +KG  P WL+P+Q  +  + + A ++YA+ + + L+   L  E D RNE + YKIR
Sbjct: 529 LIEEYKGAFPTWLAPVQMEIIPVNADAHLDYAKGVQDKLQRAGLRAEVDDRNEKLGYKIR 588

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           E   KKIP  ++ GD+E    S+ +RR+GS  ++ + L
Sbjct: 589 EAQTKKIPYALVLGDQEVEAGSVNVRRYGSKDSETMDL 626


>gi|319744717|gb|EFV97060.1| threonine--tRNA ligase [Streptococcus agalactiae ATCC 13813]
          Length = 647

 Score =  538 bits (1385), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 279/639 (43%), Positives = 412/639 (64%), Gaps = 23/639 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+TFPDG+I+ F    T  ++A+SIS SLAKKA+A   NG++ D +  + E GSIEI+T
Sbjct: 2   IKITFPDGAIREFESGITTFEIAQSISNSLAKKALAGKFNGQLIDTTRAIEEDGSIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQI 122
           P+   +L V+RHS AH+ A+A + ++P++ + +GP I+DGFYYD D K    S+D+L++I
Sbjct: 62  PDHEDALGVLRHSAAHLFAQAAKRLFPDLCLGVGPAIQDGFYYDTDNKSGQISNDDLSRI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E++M++I+  + P +++ +S E+A ELF  K + YKVE++ S  A++ +T+YRQGE+ DL
Sbjct: 122 EEEMKKIVKENHPCIREEISKEEALELF--KDDPYKVELI-SEHAEDGLTVYRQGEFVDL 178

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG+++  F L+ VAGAYWRG+S+  M+ R+YGTAW  +++L  YL   EE++
Sbjct: 179 CRGPHVPSTGRIQ-VFHLLNVAGAYWRGNSDNAMMQRVYGTAWFDKKDLKAYLKRREEAK 237

Query: 243 KRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVL 300
           +RDHRKL +E+DLF +  E G G+ FW   G  I + L  Y+  ++I   Y+ + TP + 
Sbjct: 238 ERDHRKLGKELDLFMVNPEVGQGLPFWLPNGATIRRELERYIVDKEIASGYQHVYTPPMA 297

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
               ++ SGHWD YR +MF        + D   F L+PMNCP H+ V+ H + SYRELP+
Sbjct: 298 SVEFYKTSGHWDHYREDMFPTM----DMGDGEEFVLRPMNCPHHIEVYKHHVHSYRELPI 353

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G ++R E SG+L GL RVR  T +DAH+F T EQ+ +E LK  NLI  IY+DF  
Sbjct: 354 RIAELGMMHRYEKSGALTGLQRVREMTLNDAHIFVTPEQIKDEFLKALNLIAEIYEDFNL 413

Query: 421 EKIMVKLSTR-PE---KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
                +LS R PE   K   +D +W++A+ ++K  +D         ++     GE AFYG
Sbjct: 414 TDYRFRLSYRDPEDKHKYYDNDEMWENAQAMLKEAMDDFG------LDYFEAEGEAAFYG 467

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK +  +K A+G +    TIQ+DF LP RF+  Y+ +  E+  P+MIHR    ++ERF  
Sbjct: 468 PKLDIQVKTALGNEETLSTIQLDFLLPERFDLKYIGADGEEHRPIMIHRGGISTMERFTA 527

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKI 595
           I+IE +KG  P WL+P Q  V  I++ A ++YA E+A +LK   +  E D RNE + YKI
Sbjct: 528 ILIETYKGAFPTWLAPQQVSVIPISNEAHIDYAWEVARVLKDRGIRAEVDDRNEKMQYKI 587

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           R    +KIP  +I GDKE  E+ + +RR+GS  T+  S+
Sbjct: 588 RAAQTQKIPYQLIVGDKEMEEKGVNVRRYGSKATETKSI 626


>gi|313890276|ref|ZP_07823910.1| threonine--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026]
 gi|313121381|gb|EFR44486.1| threonine--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026]
          Length = 648

 Score =  538 bits (1385), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 274/640 (42%), Positives = 408/640 (63%), Gaps = 23/640 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDP-VREGSIEIIT 63
           IK+TFPDG+++ +    T  +VA+SIS SLAKKA+A   N ++ D + P V +G+IEI+T
Sbjct: 2   IKITFPDGAVREYESGITTFEVAQSISNSLAKKALAGKFNDQLVDTNRPLVEDGNIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQI 122
           P+   +  ++RHS AH+ A+A + ++P++ + +GP I DGFYYD D +    S+++L +I
Sbjct: 62  PDHEDAFDILRHSAAHLFAQAAKRLFPDIHLGVGPAIADGFYYDTDNQAGQISNEDLPRI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFD 181
           E++M++I+  + P ++Q +S E+A E+F  K + YK+E++ E       +T+YRQGE+ D
Sbjct: 122 EEEMKKIVKENHPCIRQEVSKEEALEIF--KDDPYKIELINEHSDDAAGLTIYRQGEFVD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++  F L+ VAGAYWRG+S+ PM+ R+YGTAW  +++L  YL  LEE+
Sbjct: 180 LCRGPHVPSTGRIQ-VFHLLNVAGAYWRGNSDNPMMQRVYGTAWFDKKDLKAYLTRLEEA 238

Query: 242 EKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQV 299
           ++RDHRKL +E+DLF +  E G G+ FW   G  I +TL  Y+  K +   Y+ + TP +
Sbjct: 239 KERDHRKLGKELDLFMVNPEVGQGLPFWLPNGATIRRTLERYITDKELASGYQHVYTPPM 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
                ++ SGHWD YR +MF        + D   F L+PMNCP H+ V+ H + SYRELP
Sbjct: 299 ASVDFYKTSGHWDHYREDMFPTM----DMGDGEEFVLRPMNCPHHIEVYKHHVHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  T +D H+F T +Q+  E  +   LII +YKDF 
Sbjct: 355 IRIAELGMMHRYEKSGALSGLQRVREMTLNDGHLFVTPDQIQEEFQRALQLIIDVYKDFN 414

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R     EK   +D +W+ A++++K  LD +       ++     GE AFY
Sbjct: 415 LTDYRFRLSYRDPNDKEKYFDNDEMWEKAQSMLKAALDEMG------VDYFEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G +    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF 
Sbjct: 469 GPKLDIQVKTALGNEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMIHRGVISTMERFT 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IE +KG  P WL+P Q  V  I++ A V+YA E+A LL+   + ++ D RNE + YK
Sbjct: 529 AILIETYKGAFPTWLAPHQVTVIPISNEAHVDYAWEVAKLLRDKGVRVDVDDRNEKMQYK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           IR     KIP  +I GDKE  E+S+ +RR+GS  TQ V++
Sbjct: 589 IRASQTGKIPYQLIVGDKEMDEKSVNVRRYGSKVTQTVAI 628


>gi|154687027|ref|YP_001422188.1| threonyl-tRNA synthetase [Bacillus amyloliquefaciens FZB42]
 gi|166223321|sp|A7Z7I1|SYT_BACA2 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|154352878|gb|ABS74957.1| ThrS [Bacillus amyloliquefaciens FZB42]
          Length = 643

 Score =  537 bits (1384), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 263/646 (40%), Positives = 413/646 (63%), Gaps = 20/646 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSI 59
           M   I +TFPDG++K FP   T  D+A SIS  L KK++A  +NG+  DL  P++E G++
Sbjct: 1   MSDMINITFPDGAVKEFPKGTTTEDIAASISPGLKKKSLAGKLNGQEIDLRTPIQEDGAV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT      L ++RHS AH++A+A++ I+ +V+  +GP+IE+GFYYD + EQ  + D+L
Sbjct: 61  EIITEGTEEGLNIMRHSTAHLLAQAIKRIYKDVKFGVGPVIENGFYYDVEMEQALTPDDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IEK+M+ I+  + P +++ +S ++A+ +F    +  K+E+L++IP  E V++Y QGE+
Sbjct: 121 PKIEKEMKRIVGENLPIIRKEVSRDEAKAMFAEIGDNLKLELLDAIPEDETVSIYEQGEF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRG HV STG++K+ FKL+ +AGAYWRGDS   ML RIYGTA+  + +L ++L  LE
Sbjct: 181 FDLCRGVHVPSTGKIKE-FKLLSLAGAYWRGDSKNQMLQRIYGTAFFKKDDLKEHLRMLE 239

Query: 240 ESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTP 297
           E+++RDHRKL +E+ LF  ++  G G+  W  KG  I + +  Y+  +++   YE + TP
Sbjct: 240 EAKERDHRKLGKELKLFANSQKVGQGLPLWLPKGATIRRVIERYIVDKELSLGYEHVYTP 299

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +  + L++ SGHWD Y+  MF     D+      T  L+PMNCP H+ ++   + SYRE
Sbjct: 300 VLGSKDLYETSGHWDHYQDTMFPPMEMDN-----ETLVLRPMNCPHHMMIYKQDIHSYRE 354

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+  E ++   LI  +Y+D
Sbjct: 355 LPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEEFIRTVRLIQDVYED 414

Query: 418 FGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           FG      +LS R     EK    D +W+ A++++K  +D + +   +        GE A
Sbjct: 415 FGLNDYTFRLSYRDPEDTEKYFDDDEMWNKAQSMLKAAMDEMGHDYYE------AEGEAA 468

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  +K AIG++    T+Q+DF LP RF+  YV    ++  PV+IHR V  ++ER
Sbjct: 469 FYGPKLDVQVKTAIGKEETLSTVQLDFLLPERFDLTYVGEDGKQHRPVVIHRGVVSTMER 528

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETIN 592
           F+  +IE  KG LP WL+P+Q  V  ++ S  ++YA+++   L+   L +E D R+E I 
Sbjct: 529 FVAFLIEEHKGALPTWLAPVQFQVIPVSPSVHLDYAKKVQERLQREGLRVELDSRDEKIG 588

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           YKIRE  ++KIP +++ GD+EA   ++ +R++G   ++ VSL D +
Sbjct: 589 YKIREAQMQKIPYMLVVGDQEAENGAVNVRKYGEQKSETVSLDDFV 634


>gi|51893696|ref|YP_076387.1| threonyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
 gi|73919833|sp|Q67LA3|SYT_SYMTH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|51857385|dbj|BAD41543.1| threonyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
          Length = 651

 Score =  537 bits (1384), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 265/646 (41%), Positives = 414/646 (64%), Gaps = 16/646 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M S + +T PDGS++ +P   T ++    I   LAK A+A  ++G++ DLS  + ++ ++
Sbjct: 1   MSSVVHVTLPDGSVREYPQGITIAEAVAQIGPRLAKAALAAKVDGRLVDLSARLEKDCTL 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           +++T +D     V RH+  HIMA+AV+ ++PE ++ +GP +E+ FYYDFD  +P + ++L
Sbjct: 61  QVLTFKDEEGREVFRHTSTHIMAQAVKRLFPEAKLTVGPPLENSFYYDFDLPRPLTPEDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IE +M +I+  D P ++Q +  E+A+  F  + E YKV +++ IP  E V++Y QGE+
Sbjct: 121 EKIEAEMAKIVEADYPIVRQEVDREEAKRFFAERGEDYKVLLVDKIPEDEVVSIYTQGEF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLC GPH+ STG+VK F KL+ VAGAYW G+     L R+YGT++ ++++L  YL+ LE
Sbjct: 181 TDLCVGPHLPSTGRVKAF-KLLSVAGAYWEGNQANKQLQRVYGTSFESKKDLEDYLFRLE 239

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+ +RDHR+L  E+ L+   E   G  FW  KG+++++ L ++ R+ +    YEE++TP 
Sbjct: 240 EARRRDHRRLGPELGLYRFEEVAPGFAFWLDKGYRLYRELENWSRKLQEARGYEEVSTPW 299

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++   L++ SGHW  YR NMF ++  D      + FA KPMNCP H  ++   ++SYR+L
Sbjct: 300 IVSSKLYETSGHWQHYRQNMFEIRAED------QDFATKPMNCPCHCVLYKSQIRSYRDL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+++AE+G + R E SG+LHGL+RVRGF QDDAH+F   +Q+  +  ++  L+ +IY   
Sbjct: 354 PLKIAEYGPLSRFEASGTLHGLLRVRGFHQDDAHLFVRPDQIEEQIREVIGLVDTIYGTL 413

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           G E   +KLSTRPE  +G   LW++AE  +   LD +  S   ++N G    +GAFYGPK
Sbjct: 414 GLE-YEIKLSTRPEDFMGDIELWNEAEAALARALDGMGRSY--KLNPG----DGAFYGPK 466

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++ + DA+GR WQC T+Q+DF LP +F+  Y+    ++  PVMIHRA+ G++ERFIGI+
Sbjct: 467 LDFDVTDALGRKWQCATVQLDFQLPIKFDLTYIGEDGKEHRPVMIHRAIMGTLERFIGIL 526

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
            E++ GN PLW++P+QA V  IT     YA E+   L+   L +E D+RNE + YKIRE 
Sbjct: 527 TEHYAGNFPLWMAPVQARVLPITDRHHAYAGEVVAKLQEAGLRVEGDYRNEKVGYKIREA 586

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            + KIP I++ GDKEA   ++ +RR G      + L D + +   E
Sbjct: 587 ELLKIPFILVVGDKEAEAGAVAVRRRGMKDLGPMPLADFLALAQSE 632


>gi|46907789|ref|YP_014178.1| threonyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|47093096|ref|ZP_00230873.1| threonyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
 gi|217964294|ref|YP_002349972.1| threonyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|226224160|ref|YP_002758267.1| threonyl-tRNA synthetase [Listeria monocytogenes Clip81459]
 gi|254824382|ref|ZP_05229383.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
 gi|254852182|ref|ZP_05241530.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|254931499|ref|ZP_05264858.1| threonyl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|255520160|ref|ZP_05387397.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL J1-175]
 gi|290893960|ref|ZP_06556936.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL J2-071]
 gi|300764775|ref|ZP_07074765.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
 gi|67461796|sp|Q71ZA9|SYT_LISMF RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|254783526|sp|B8DHI9|SYT_LISMH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|259516560|sp|C1KVK6|SYT_LISMC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|46881058|gb|AAT04355.1| threonyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|47018536|gb|EAL09292.1| threonyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
 gi|217333564|gb|ACK39358.1| threonyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|225876622|emb|CAS05331.1| threonyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           CLIP 80459]
 gi|258605487|gb|EEW18095.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|290556498|gb|EFD90036.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL J2-071]
 gi|293583051|gb|EFF95083.1| threonyl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|293593617|gb|EFG01378.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
 gi|300514451|gb|EFK41508.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
 gi|307571140|emb|CAR84319.1| thrS [Listeria monocytogenes L99]
 gi|313608610|gb|EFR84472.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL F2-208]
 gi|328465594|gb|EGF36823.1| threonyl-tRNA synthetase [Listeria monocytogenes 1816]
 gi|332312001|gb|EGJ25096.1| Threonyl-tRNA synthetase [Listeria monocytogenes str. Scott A]
          Length = 640

 Score =  537 bits (1384), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 266/638 (41%), Positives = 409/638 (64%), Gaps = 20/638 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           +K+TFPDG++K F    + +D+A SIS  L KKA+A  +NG++ DL  P+ E G+IEI+T
Sbjct: 1   MKITFPDGAVKEFEPGVSTADIAASISPGLKKKALAGKLNGELLDLVTPIHEDGAIEIVT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+   +L ++RHS AH+MA+A++ ++P+V+  +GP IE GFYYD D E   S + L +IE
Sbjct: 61  PDHEDALGILRHSTAHLMAQALKRLYPDVKFGVGPAIESGFYYDIDTEAVISDESLVEIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+MQ+I+  + P  ++ +S E+A + F++  + YK+E++E+IP  E VT+Y QGE+FDLC
Sbjct: 121 KEMQKIVRENVPIEREVVSREEAIKRFKAIGDQYKLELIEAIPEDETVTIYTQGEFFDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RG HV STG++ + FKL+ VAGAYWRGDSN  ML RIYGTA+  +  L +++   +E+++
Sbjct: 181 RGVHVPSTGKI-QVFKLLSVAGAYWRGDSNNKMLQRIYGTAFFDKNGLKEFIQMQKEAKE 239

Query: 244 RDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLD 301
           RDHRKL +E+DLF +  E G G+  W  KG  I + +  Y+  ++ +  Y  + TP + +
Sbjct: 240 RDHRKLGKELDLFANSIEVGQGLPLWLPKGATIRRVIERYIVDKEERLGYNHVYTPIMAN 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             L++ SGHWD Y  +MF     D+         L+PMNCP H+ ++ + + SYRELP+R
Sbjct: 300 VELYKTSGHWDHYHEDMFPTMKMDN-----EELVLRPMNCPHHMMIYKNDIHSYRELPIR 354

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AE G ++R E SG+L GL RVRG T +DAHVF   +Q+ +E  ++  LI+ +YKDF  +
Sbjct: 355 IAELGMMHRYEMSGALSGLQRVRGMTLNDAHVFVRPDQIKDEFKRVVELILEVYKDFDIK 414

Query: 422 KIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
               +LS R     EK    DA+W+ A+ ++K  +D ++      ++     GE AFYGP
Sbjct: 415 DYSFRLSYRDPKNTEKYFDDDAMWEKAQAMLKSAMDEME------MDYFEAEGEAAFYGP 468

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  +K AIG++    T+Q+DF LP RF+  Y+    EK  PV+IHR V  ++ERF+  
Sbjct: 469 KLDVQVKTAIGKEETLSTVQLDFLLPERFDLTYIGEDGEKHRPVVIHRGVVSTMERFVAY 528

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +IE +KG  P WL+P+Q  +  + + A ++YA+ + + L+   L  E D RNE + YKIR
Sbjct: 529 LIEEYKGAFPTWLAPVQMELIPVNADAHLDYAKGVQDKLQRAGLRAEVDDRNEKLGYKIR 588

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           E   KKIP  ++ GD+E    S+ +RR+GS  ++ + L
Sbjct: 589 EAQTKKIPYALVLGDQEVEAGSVNVRRYGSKDSETMDL 626


>gi|218295928|ref|ZP_03496708.1| threonyl-tRNA synthetase [Thermus aquaticus Y51MC23]
 gi|218243666|gb|EED10194.1| threonyl-tRNA synthetase [Thermus aquaticus Y51MC23]
          Length = 660

 Score =  537 bits (1384), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 273/636 (42%), Positives = 404/636 (63%), Gaps = 25/636 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           + +  PDG     P  AT  +VAE I   LAK+AV   +NG+V DL  P+  G ++ I+T
Sbjct: 1   MTVYLPDGKALEVPEGATAKEVAERIGPGLAKRAVGAIVNGEVYDLLKPLPPGATVRILT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPE-------VQVAIGPIIEDGFYYDFDKEQPFSS 116
            +DP    + RH+ AH++A+AV+  + E       V++ +GP+IE GFYYD D  +P S 
Sbjct: 61  EKDPEYQLLFRHTLAHVLAQAVKEFFREKGYDPESVRLGVGPVIEKGFYYDIDAPEPLSD 120

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
           ++L QIE+KM+EI+ RD P  +  L  E A   ++ K + YK E++  +P  E ++ Y+Q
Sbjct: 121 EDLPQIEEKMREILRRDLPLKRYVLPREAALARYQGK-DPYKTELILDLPEGEEISFYQQ 179

Query: 177 GE----WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELT 232
           G+    + DLCRGPHV STG++   FKL  VAGAYWRGD  RPML R+YG A+ T +EL 
Sbjct: 180 GDEAFGFTDLCRGPHVPSTGRIPPHFKLTHVAGAYWRGDERRPMLQRVYGVAFRTAEELK 239

Query: 233 QYLYFLEESEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDD 290
           +YL+ LEE++KRDHR+L RE++LF I    G G++ W  KG  I + LI++MR  +IK  
Sbjct: 240 EYLWQLEEAKKRDHRRLGRELELFLIDPMVGKGLVLWLPKGNVIREELIAFMREEQIKRG 299

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH 350
           Y+ + TP +    L++ SGH+  Y  + F      +  ++   + LKPMNCP H+ ++ H
Sbjct: 300 YQLVTTPHIGSLELYKTSGHYPYYAESQFPPISFKERGEE-EEYLLKPMNCPHHIRIYAH 358

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
             +SYRELP+RLAEFG+VYR E +G L GL RVRGFTQDDAH+FC  E +  E L + +L
Sbjct: 359 KKRSYRELPLRLAEFGTVYRYEKAGELLGLTRVRGFTQDDAHIFCAPEDVKGEFLGVLDL 418

Query: 411 IISIYKDFGFEKIMVKLSTR---PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGV 467
           ++ ++   G +    ++ TR    +K VG +A W  AE  ++      + + +  ++  V
Sbjct: 419 VLKVFATLGLKDFRARIGTRDPKSDKYVGDEARWSLAERQIE------EAALEAGLHYTV 472

Query: 468 LLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAV 527
             G+ AFYGPK ++++KDA+GR+WQ GTIQVD+NLP RF   YV    E+  PV++HRA 
Sbjct: 473 EEGDAAFYGPKLDFVVKDALGREWQLGTIQVDYNLPERFGLTYVGKDGEEHRPVVLHRAP 532

Query: 528 FGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR 587
           FGS+ERFIGI+IE+F G+ PLWLSP+Q +V  ++    +YA E+ + LK   L  E D R
Sbjct: 533 FGSLERFIGILIEHFAGDFPLWLSPVQVVVVPVSEKQEDYALEVTHRLKEAGLRAEADTR 592

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRR 623
            E +  +IR+  +KK+P +++ G+KE +E ++ +RR
Sbjct: 593 PERMQARIRDAELKKVPYVLVVGEKEKAEGAVSVRR 628


>gi|148269334|ref|YP_001243794.1| threonyl-tRNA synthetase [Thermotoga petrophila RKU-1]
 gi|166225512|sp|A5IJ45|SYT_THEP1 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|147734878|gb|ABQ46218.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Thermotoga
           petrophila RKU-1]
          Length = 640

 Score =  537 bits (1383), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 279/648 (43%), Positives = 412/648 (63%), Gaps = 26/648 (4%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           IK+  PDG  K +    T +++A+ +     KKA+   +NG++ DL  P+  +  + ++T
Sbjct: 3   IKVKLPDGKEKEYDRGITPAEIAKELG---VKKAIGAVVNGELWDLKRPIENDCELRLVT 59

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPE--VQVAIGPIIEDGFYYDFD-KEQPFSSDELA 120
            EDP +    RH+ AHI+A+AV  I+ +  V++ IGP IE+GFYYDFD K    + ++L 
Sbjct: 60  LEDPEAPEFYRHTMAHILAQAVMRIYGKENVKLGIGPTIENGFYYDFDIKNGKLTEEDLP 119

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IE++M++II  + P  ++ +S E+AR+LF +  + YK+E++E I   + VT+YRQGE+ 
Sbjct: 120 KIEQEMKKIIKENLPIERKEISKEEARKLFNN--QPYKLELIEEIEG-DRVTIYRQGEFV 176

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ STG VK F KL+ V+GAYWRG    PML+R+YGTA+  +++L  YL FLEE
Sbjct: 177 DLCRGPHLPSTGVVKHF-KLLSVSGAYWRGSEKNPMLTRVYGTAFAKKEDLDNYLKFLEE 235

Query: 241 SEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           +++RDHRKL   ++LF +  E   G+ F+  KG  +   L+ + R   ++  Y+EI TP 
Sbjct: 236 AQRRDHRKLGPHLELFMLNTEYAPGMPFFLPKGVVVLNELMRFSRELHRERGYQEIFTPL 295

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++++ LW+ SGHWD Y  NM+ ++      KD   +A+KPMNCPGH+ V+     SYR+L
Sbjct: 296 IMNEQLWKISGHWDHYAENMYFIE------KDEERYAVKPMNCPGHILVYKSRTVSYRDL 349

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R  EFG V+R E SG LHGLMRVR FTQDDAH+FCT +Q+  E L + +LI +IY  F
Sbjct: 350 PLRFFEFGRVHRYERSGVLHGLMRVRSFTQDDAHIFCTPDQIEEEILGVLDLINTIYGQF 409

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF    V+LST PE  +G +A+W+ A   +K  L+    S   ++N G    EGAFYGPK
Sbjct: 410 GF-TYRVELSTMPEDHMGDEAIWEKATTALKNALERAGLSY--KVNEG----EGAFYGPK 462

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++ ++D+IGR+WQC TIQ+DF +P +FN  Y+   +++   VMIHRA++GS+ERF GI+
Sbjct: 463 IDFHIRDSIGREWQCATIQLDFMMPEKFNVTYIGPDNKEHRAVMIHRAIYGSLERFFGIL 522

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+F G  P WL+PIQ  V  I+    + A++IA  +      +  D R ET+ Y+IR+ 
Sbjct: 523 IEHFAGAFPTWLAPIQVAVIPISEKHNDGAEKIAKRISQEGFRVFFDNRRETLGYRIRQA 582

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
             +KIP +II GDKE     I +R       + V L   +  L  E L
Sbjct: 583 QTQKIPYMIILGDKELESGKISVRTRTGKEIKDVDLEHFVETLRNEVL 630


>gi|149910913|ref|ZP_01899544.1| threonyl-tRNA synthetase [Moritella sp. PE36]
 gi|149805980|gb|EDM65964.1| threonyl-tRNA synthetase [Moritella sp. PE36]
          Length = 513

 Score =  537 bits (1383), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 258/523 (49%), Positives = 352/523 (67%), Gaps = 16/523 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPE 65
           +T PDG+ + F    T  +VA  IS  LAK  +A  ING+  D  D + E  +IEIIT +
Sbjct: 4   ITLPDGAQRQFDNPVTIMEVAADISSGLAKACIAGRINGERVDACDLITEDAAIEIITSK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L ++RHSCAH++  A++ +WP  ++AIGP I+ GFYYD + E+P S  +LA++EK 
Sbjct: 64  DADGLEILRHSCAHLLGHAIKQLWPNTKMAIGPTIDKGFYYDVEMEEPISEADLAKLEKH 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M +++  +   +K+ +S ++AR+ FE++ E YKV IL E+I   E   LY   E+ D+CR
Sbjct: 124 MNKLVKTNYQVVKKVVSWQEARDTFEARGETYKVAILDENIGKDETPALYYHEEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV      +  FKLM +AGAYWRG+S+  ML RIYGTAW  ++EL  ++  L E+EKR
Sbjct: 184 GPHVPVMKHCQ-HFKLMSIAGAYWRGNSDNKMLQRIYGTAWTDKKELKAHIERLAEAEKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ ED  G++FWH  GW IF+ L + +R K+++ DY+E+  PQ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEDAPGMVFWHNDGWIIFRELENLIREKLREFDYQEVKGPQIMDRS 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV ++N GLKSYR+LP+R+A
Sbjct: 303 LWEKSGHWDKYSEGMFC------THSENREYAIKPMNCPGHVQIYNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+ Q+  E      ++   Y  FGFE I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTESQIQKEVSDCIKMVFETYATFGFENI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            +KLSTRPEKRVGSD  WD +E  +   L T    S D     V  GEGAFYGPK E+ L
Sbjct: 417 EIKLSTRPEKRVGSDETWDKSEQALADAL-TASGLSYD-----VQEGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
            D + R WQCGTIQ+DF++P +  A YV   + +  PVMIHRA
Sbjct: 471 HDCLDRAWQCGTIQLDFSMPEKLGAEYVCESNGRETPVMIHRA 513


>gi|319651798|ref|ZP_08005923.1| threonyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
 gi|317396450|gb|EFV77163.1| threonyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
          Length = 643

 Score =  537 bits (1383), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 262/652 (40%), Positives = 420/652 (64%), Gaps = 20/652 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M   +K++FPDG++K +P   T  D+A SIS  L KKA+A  ++G++ DL  P+ ++G+I
Sbjct: 1   MSEVVKVSFPDGAVKEYPKGTTTEDIAASISPGLKKKAIAGKLDGEMYDLRRPIEKDGAI 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EI+TP+   +L V+RHS AH+MA+A++ ++  V++ +GP+IE GFYYD D E+  S ++L
Sbjct: 61  EIVTPDSNDALEVLRHSTAHLMAQAIKRLYKNVKLGVGPVIEGGFYYDIDLEESLSPEDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEK+M++II  +   +++ +S  +A ++++   + YK+E++E+IP  E VT+Y QGE+
Sbjct: 121 PVIEKEMKKIINENLDVVRKEVSRNEAVQMYKEIGDEYKLELIEAIPEDETVTIYEQGEF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRG HV STG++K+ FKL+ +AGAYWRGDS+  ML RIYGTA+  +++L ++L  LE
Sbjct: 181 FDLCRGVHVPSTGKLKE-FKLLSIAGAYWRGDSDNKMLQRIYGTAFFKKEDLAEHLRLLE 239

Query: 240 ESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTP 297
           E+++RDHRK+ +E++LF  ++  G G+  W  KG  I + +  Y+  ++ +  Y+ + TP
Sbjct: 240 EAKERDHRKIGKELNLFMNSQKVGQGLPMWLPKGATIRRNIERYIVDKEERLGYDHVYTP 299

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    L++ SGHWD Y+ +MF V   D+         L+PMNCP H+ ++ +G+ SYRE
Sbjct: 300 IMGSVDLYKTSGHWDHYQEDMFPVMEMDN-----EQLVLRPMNCPHHMMIYKNGIHSYRE 354

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+  E  ++ +LI+ +YKD
Sbjct: 355 LPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEEFKRVVHLILEVYKD 414

Query: 418 FGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           F       +LS R     EK    D +W+ A+ ++K  +D I       ++     GE A
Sbjct: 415 FDINDYSFRLSYRDPQDTEKYFDDDEMWEKAQAMLKEAMDEIG------LDYFEAEGEAA 468

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  +K A+G+D    T+Q+DF LP RF+  YV    +   PV+IHR V  ++ER
Sbjct: 469 FYGPKLDVQVKTALGKDETLSTVQLDFLLPERFDLTYVAEDGKPHRPVVIHRGVVSTMER 528

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETIN 592
           F+  +IE +KG  P WL+P+Q  V  ++     +YA+++   L++    +E D RNE I 
Sbjct: 529 FVAFLIEEYKGAFPTWLAPVQVQVIPVSPDIHFDYAKQVREQLQAEGFRVELDDRNEKIG 588

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           YKIRE  ++K P +++ GD E +E+++ +R++G   ++ VS  D I  L  E
Sbjct: 589 YKIREAQMQKTPYMLVVGDNEVAEKAVNVRKYGEQKSETVSFEDFISALKAE 640


>gi|227501051|ref|ZP_03931100.1| threonine--tRNA ligase [Anaerococcus tetradius ATCC 35098]
 gi|227216824|gb|EEI82222.1| threonine--tRNA ligase [Anaerococcus tetradius ATCC 35098]
          Length = 667

 Score =  537 bits (1383), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 269/643 (41%), Positives = 395/643 (61%), Gaps = 17/643 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           IK+  PDGS+K +       DV + IS  L + A+   +NGKV   ++P+ E S   ++ 
Sbjct: 29  IKIKLPDGSVKEYESGVLVGDVTKDISMGLYRAALGAVVNGKVMGYAEPIEEDSDFRVVK 88

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            ED     +  H+ +H+MA A+  ++P  + AIGP I DGFYYD D E  F+ ++L +IE
Sbjct: 89  FEDKEGKEIFWHTSSHLMAAAINELYPNTKFAIGPAINDGFYYDMDLEHRFTPEDLEKIE 148

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF-DL 182
           KKM E+  +D    +  +S  +A E+F+  K+ YKVE++E +P  E +TLY+ G+ F DL
Sbjct: 149 KKMLELAKKDLKLERVEISRNEALEMFKKDKQDYKVELIEDLPEDEKITLYKMGDVFVDL 208

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ ST +V K  KL  +AGAYWRGDS+R ML RIYG ++   ++L +Y    +E E
Sbjct: 209 CRGPHLEST-KVIKAVKLKTIAGAYWRGDSDRQMLQRIYGISFEKAKQLEEYEELQKEIE 267

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLD 301
           KRDHRK+ REM+LF   E+G G  F+H  G  +   L+ +    + ++ Y EI TP +L+
Sbjct: 268 KRDHRKIGREMNLFAFHEEGPGFPFFHPNGMILMNELLVWWTDVLNNNGYGEIKTPLILN 327

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW +SGHWD Y+ NM+  K       D   +A+KPMNCPG V  +     SYR+LP+R
Sbjct: 328 EALWHRSGHWDHYKENMYFTKI------DGEAYAVKPMNCPGSVLTYAANQHSYRDLPIR 381

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAE+G V+R+E SG+LHGL RVR FTQDDAHV+C   Q+  E  K+ +L   +Y  FGF 
Sbjct: 382 LAEYGQVHRHELSGTLHGLFRVRTFTQDDAHVYCMPSQIKEEVYKMIDLADLLYSTFGF- 440

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
           K  ++LSTRP+  +G    WD AE+ +K  L+      +  I   +  G+GAFYGPK ++
Sbjct: 441 KYTIELSTRPDDFMGEIKDWDFAEDQLKKALE------ERGIEYEINPGDGAFYGPKIDF 494

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L DA  R+WQCGTIQ+DF LP  F+  Y++ + EK  P M+HRA+ GSIERFIG++ E+
Sbjct: 495 HLLDAAKREWQCGTIQLDFQLPQNFDLTYIDENGEKKRPAMLHRALLGSIERFIGVLTEH 554

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           F G  PLWL+P Q  +  ++   + YA+E+   +K     +  D+R+E + YKIR+  + 
Sbjct: 555 FAGRFPLWLNPQQVEIIPVSDKYIPYAEELKEKIKKAGYRVNIDYRSEGVGYKIRQAQLM 614

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +   +++ G+KE +   + +R   +  T  VSL + I  L +E
Sbjct: 615 RTNYMLVVGEKEENSGKLTVRNRDAKETPDVSLEEFIEKLNEE 657


>gi|295115128|emb|CBL35975.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase
           [butyrate-producing bacterium SM4/1]
          Length = 605

 Score =  537 bits (1383), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 264/587 (44%), Positives = 377/587 (64%), Gaps = 16/587 (2%)

Query: 43  INGKVCDLSDPV-REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE 101
           ++G+V DL   + ++  + I+T  D + LA +RH+ +H+MA+AV+ ++P+ ++AIGP I 
Sbjct: 1   MDGEVVDLRTVIDKDCQLNILTARDEKGLAALRHTASHVMAQAVKRLYPDTKLAIGPSIA 60

Query: 102 DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEI 161
           DGFYYD D   P +++++ +IE +M++I+  + P  +  L  E+A    + K+E YKVE+
Sbjct: 61  DGFYYDVDPASPMTAEDMGKIEAEMKKIVKENLPIERFTLPREEAIAFMKEKEEPYKVEL 120

Query: 162 LESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIY 221
           +E +P    ++ YRQGE+ DLC GPH+ ST  V K +KL+ +AGAYWRG     ML+RIY
Sbjct: 121 IEDLPEGAEISFYRQGEFVDLCAGPHLMSTKDVGKAYKLLNLAGAYWRGSEKNKMLTRIY 180

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLIS 281
            TA+  ++EL  Y+  +EE++KRDHRKL +E+ LF + + G G  F+  KG ++  TL+ 
Sbjct: 181 ATAFFKKEELEAYITMMEEAKKRDHRKLGKELGLFMMHDAGPGFPFFLPKGMQLKNTLLD 240

Query: 282 YMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
           Y R    K  Y EI+TP +L++ LW+ SGHWD Y+ NM+       T+ D   +A+KPMN
Sbjct: 241 YWREIHKKAGYVEISTPIILNRSLWETSGHWDHYKNNMYT------TVIDEEDYAIKPMN 294

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
           CPG V V+    +SYR+LP+R+ E G V+R+E SG LHGLMRVR FTQDDAH+F T EQ+
Sbjct: 295 CPGGVLVYASEPRSYRDLPLRMGELGLVHRHEKSGQLHGLMRVRCFTQDDAHIFMTPEQI 354

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQ 460
            +E   +  LI  +Y  FGF K  V+LSTRPE  +GSD  W+ A   ++  LD +     
Sbjct: 355 KDEIKGVATLINEVYTLFGF-KYHVELSTRPEDSMGSDEDWELATEGLRSALDELG---- 409

Query: 461 DRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHP 520
             +   V  G+GAFYGPK ++ L+D IGR WQCGTIQ+DF LP RF   Y  +  EK  P
Sbjct: 410 --LPYVVNEGDGAFYGPKIDFHLEDCIGRTWQCGTIQLDFQLPQRFELEYTGADGEKHRP 467

Query: 521 VMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHL 580
           +MIHR VFGSIERFIGI+IE+F G  P WL+P+Q  V  I+    +YA ++   L    +
Sbjct: 468 IMIHRVVFGSIERFIGILIEHFAGAFPTWLAPVQVKVLPISDKYADYAAKVYESLSEAGI 527

Query: 581 SIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR-RFGS 626
             E D R+E I YKIRE    KIP +++ G KE  E ++ +R RF  
Sbjct: 528 RAEVDTRSEKIGYKIREAQTNKIPYMLVVGQKEEEEGTVSVRSRFAG 574


>gi|328912917|gb|AEB64513.1| threonyl-tRNA synthetase [Bacillus amyloliquefaciens LL3]
          Length = 653

 Score =  536 bits (1382), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 263/646 (40%), Positives = 414/646 (64%), Gaps = 20/646 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSI 59
           M   I +TFPDG++K FP  +T  D+A SIS  L KK++A  +NG+  DL  P++E G++
Sbjct: 11  MSDMINITFPDGAVKEFPKGSTTEDIAASISPGLKKKSLAGKLNGQEIDLRTPIQEDGAV 70

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT      L ++RHS AH++A+A++ I+ +V+  +GP+IE+GFYYD + EQ  + D+L
Sbjct: 71  EIITEGTEEGLNIMRHSTAHLLAQAIKRIYKDVKFGVGPVIENGFYYDVEMEQALTPDDL 130

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IEK+M+ I+  + P +++ +S ++A+ +F    +  K+E+L++IP  E V++Y QGE+
Sbjct: 131 PKIEKEMKRIVGENLPIIRKEVSRDEAKSMFAEIGDNLKLELLDAIPEDETVSIYEQGEF 190

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRG HV STG++K+ FKL+ +AGAYWRGDS   ML RIYGTA+  + +L ++L  LE
Sbjct: 191 FDLCRGVHVPSTGKIKE-FKLLSLAGAYWRGDSKNQMLQRIYGTAFFKKDDLKEHLRMLE 249

Query: 240 ESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTP 297
           E+++RDHRKL +E+ LF  ++  G G+  W  KG  I + +  Y+  +++   YE + TP
Sbjct: 250 EAKERDHRKLGKELKLFANSQKVGQGLPLWLPKGATIRRVIERYIVDKELSLGYEHVYTP 309

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +  + L++ SGHW+ Y+  MF     D+      T  L+PMNCP H+ ++   + SYRE
Sbjct: 310 VLGSKDLYETSGHWEHYQDGMFPPMEMDN-----ETLVLRPMNCPHHMMIYKQDIHSYRE 364

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+  E ++   LI  +Y+D
Sbjct: 365 LPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEEFIRTVRLIQDVYED 424

Query: 418 FGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           FG      +LS R     EK    D +W+ A++++K  +D I +   +        GE A
Sbjct: 425 FGLSDYTFRLSYRDPEDTEKYFDDDDMWNKAQSMLKAAMDEIGHDYYE------AEGEAA 478

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  +K AIG++    T+Q+DF LP RF+  YV    ++  PV+IHR V  ++ER
Sbjct: 479 FYGPKLDVQVKTAIGKEETLSTVQLDFLLPERFDLTYVGEDGKQHRPVVIHRGVVSTMER 538

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETIN 592
           F+  +IE  KG LP WL+P+Q  V  ++ S  ++YA+++   L+   L +E D R+E I 
Sbjct: 539 FVAFLIEEHKGALPTWLAPVQFQVIPVSPSVHLDYAKKVQERLQREGLRVELDSRDEKIG 598

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           YKIRE  ++KIP +++ GD+EA   ++ +R++G   ++ VSL D +
Sbjct: 599 YKIREAQMQKIPYMLVVGDQEAENGAVNVRKYGEQKSETVSLDDFV 644


>gi|22536875|ref|NP_687726.1| threonyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
 gi|76787804|ref|YP_329459.1| threonyl-tRNA synthetase [Streptococcus agalactiae A909]
 gi|76799413|ref|ZP_00781564.1| threonyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
 gi|77405954|ref|ZP_00783034.1| threonyl-tRNA synthetase [Streptococcus agalactiae H36B]
 gi|77413516|ref|ZP_00789706.1| threonyl-tRNA synthetase [Streptococcus agalactiae 515]
 gi|73919828|sp|Q8E0L9|SYT_STRA5 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|123771973|sp|Q3K1Z4|SYT_STRA1 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|22533725|gb|AAM99598.1|AE014224_1 threonyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
 gi|76562861|gb|ABA45445.1| threonyl-tRNA synthetase [Streptococcus agalactiae A909]
 gi|76585236|gb|EAO61843.1| threonyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
 gi|77160460|gb|EAO71581.1| threonyl-tRNA synthetase [Streptococcus agalactiae 515]
 gi|77175465|gb|EAO78254.1| threonyl-tRNA synthetase [Streptococcus agalactiae H36B]
          Length = 647

 Score =  536 bits (1382), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 279/639 (43%), Positives = 412/639 (64%), Gaps = 23/639 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+TFPDG+I+ F    T  ++A+SIS SLAKKA+A   NG++ D +  + E GSIEI+T
Sbjct: 2   IKITFPDGAIREFESGITTFEIAQSISNSLAKKALAGKFNGQLIDTTRAIEEDGSIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQI 122
           P+   +L V+RHS AH+ A+A + ++P++ + +GP I+DGFYYD D K    S+D+L +I
Sbjct: 62  PDHEDALGVLRHSAAHLFAQAAKRLFPDLCLGVGPAIQDGFYYDTDNKSGQISNDDLPRI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E++M++I+  + P +++ +S E+A ELF  K + YKVE++ S  A++ +T+YRQGE+ DL
Sbjct: 122 EEEMKKIVKENHPCIREEISKEEALELF--KDDPYKVELI-SEHAEDGLTVYRQGEFVDL 178

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG+++  F L+ VAGAYWRG+S+  M+ R+YGTAW  +++L  YL   EE++
Sbjct: 179 CRGPHVPSTGRIQ-VFHLLNVAGAYWRGNSDNAMMQRVYGTAWFDKKDLKAYLKRREEAK 237

Query: 243 KRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVL 300
           +RDHRKL +E+DLF +  E G G+ FW   G  I + L  Y+  ++I   Y+ + TP + 
Sbjct: 238 ERDHRKLGKELDLFMVNPEVGQGLPFWLPNGATIRRELERYIVDKEIASGYQHVYTPPMA 297

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
               ++ SGHWD YR +MF        + D   F L+PMNCP H+ V+ H + SYRELP+
Sbjct: 298 SVEFYKTSGHWDHYREDMFPTM----DMGDGEEFVLRPMNCPHHIEVYKHHVHSYRELPI 353

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G ++R E SG+L GL RVR  T +DAH+F T EQ+ +E LK  NLI  IY+DF  
Sbjct: 354 RIAELGMMHRYEKSGALTGLQRVREMTLNDAHIFVTPEQIKDEFLKALNLIAEIYEDFNL 413

Query: 421 EKIMVKLSTR-PE---KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
                +LS R PE   K   +D +W++A+ ++K  +D         ++     GE AFYG
Sbjct: 414 TDYRFRLSYRDPEDKHKYYDNDEMWENAQAMLKEAMDDFG------LDYFEAEGEAAFYG 467

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK +  +K A+G +    TIQ+DF LP RF+  Y+ +  E+  P+MIHR    ++ERF  
Sbjct: 468 PKLDIQVKTALGNEETLSTIQLDFLLPERFDLKYIGADGEEHRPIMIHRGGISTMERFTA 527

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKI 595
           I+IE +KG  P WL+P Q  V  I++ A ++YA E+A +LK   +  E D RNE + YKI
Sbjct: 528 ILIETYKGAFPTWLAPQQVSVIPISNEAHIDYAWEVARVLKDRGIRAEVDDRNEKMQYKI 587

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           R    +KIP  +I GDKE  E+++ +RR+GS  T+  S+
Sbjct: 588 RAAQTQKIPYQLIVGDKEMEEKAVNVRRYGSKATETKSI 626


>gi|281411969|ref|YP_003346048.1| threonyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
 gi|281373072|gb|ADA66634.1| threonyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
          Length = 640

 Score =  536 bits (1382), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 279/648 (43%), Positives = 412/648 (63%), Gaps = 26/648 (4%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           IK+  PDG  K +    T +++A+ +     KKA+   +NG++ DL  P+  +  + ++T
Sbjct: 3   IKVKLPDGKEKEYDRGITPAEIAKELG---VKKAIGAVVNGELWDLKRPIENDCELRLVT 59

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPE--VQVAIGPIIEDGFYYDFD-KEQPFSSDELA 120
            EDP +    RH+ AHI+A+AV  I+ +  V++ IGP IE+GFYYDFD K    + ++L 
Sbjct: 60  LEDPEAPEFYRHTMAHILAQAVMRIYGKENVKLGIGPTIENGFYYDFDIKNGKLTEEDLP 119

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IE++M++II  + P  ++ +S E+AR+LF +  + YK+E++E I   + VT+YRQGE+ 
Sbjct: 120 KIEQEMKKIIKENLPIERKEISKEEARKLFNN--QPYKLELIEEIEG-DRVTIYRQGEFV 176

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ STG VK F KL+ V+GAYWRG    PML+R+YGTA+  +++L  YL FLEE
Sbjct: 177 DLCRGPHLPSTGVVKHF-KLLSVSGAYWRGSEKNPMLTRVYGTAFAKKEDLDNYLKFLEE 235

Query: 241 SEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           +++RDHRKL   ++LF +  E   G+ F+  KG  +   L+ + R   ++  Y+EI TP 
Sbjct: 236 AQRRDHRKLGPHLELFMLNTEYAPGMPFFLPKGVVVLNELMRFSRELHRERGYQEIFTPL 295

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++++ LW+ SGHWD Y  NM+ ++      KD   +A+KPMNCPGH+ V+     SYR+L
Sbjct: 296 IMNEQLWKISGHWDHYAENMYFIE------KDEERYAVKPMNCPGHILVYKSRTVSYRDL 349

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R  EFG V+R E SG LHGLMRVR FTQDDAH+FCT +Q+  E L + +LI +IY  F
Sbjct: 350 PLRFFEFGRVHRYERSGVLHGLMRVRSFTQDDAHIFCTPDQIEEEILGVLDLINTIYGQF 409

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF    V+LST PE  +G +A+W+ A   +K  L+    S   ++N G    EGAFYGPK
Sbjct: 410 GF-TYRVELSTMPEDHMGDEAIWEKATTALKNALERAGLSY--KVNEG----EGAFYGPK 462

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++ ++D+IGR+WQC TIQ+DF +P +FN  Y+   +++   VMIHRA++GS+ERF GI+
Sbjct: 463 IDFHIRDSIGREWQCATIQLDFMMPEKFNVTYIGPDNKEHKAVMIHRAIYGSLERFFGIL 522

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+F G  P WL+PIQ  V  I+    + A++IA  +      +  D R ET+ Y+IR+ 
Sbjct: 523 IEHFAGAFPTWLAPIQVAVIPISEKHNDGAEKIAKRISQEGFRVFFDNRRETLGYRIRQA 582

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
             +KIP +II GDKE     I +R       + V L   +  L  E L
Sbjct: 583 QTQKIPYMIILGDKELESGKISVRTRTGKEIKDVDLEHFVETLRNEVL 630


>gi|25010739|ref|NP_735134.1| threonyl-tRNA synthetase [Streptococcus agalactiae NEM316]
 gi|77410759|ref|ZP_00787117.1| threonyl-tRNA synthetase [Streptococcus agalactiae CJB111]
 gi|73919827|sp|Q8E693|SYT_STRA3 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|23095093|emb|CAD46328.1| theronyl-tRNA synthetase [Streptococcus agalactiae NEM316]
 gi|77163138|gb|EAO74091.1| threonyl-tRNA synthetase [Streptococcus agalactiae CJB111]
          Length = 647

 Score =  536 bits (1381), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 278/639 (43%), Positives = 412/639 (64%), Gaps = 23/639 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+TFPDG+I+ F    T  ++A+SIS SLAKKA+A   NG++ D +  + E GSIEI+T
Sbjct: 2   IKITFPDGAIREFESGITTFEIAQSISNSLAKKALAGKFNGQLIDTTRAIEEDGSIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQI 122
           P+   +L V+RHS AH+ A+A + ++P++ + +GP I+DGFYYD D K    S+D+L ++
Sbjct: 62  PDHEDALGVLRHSAAHLFAQAAKRLFPDLCLGVGPAIQDGFYYDTDNKSGQISNDDLPRV 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E++M++I+  + P +++ +S E+A ELF  K + YKVE++ S  A++ +T+YRQGE+ DL
Sbjct: 122 EEEMKKIVKENHPCIREEISKEEALELF--KDDPYKVELI-SEHAEDGLTVYRQGEFVDL 178

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG+++  F L+ VAGAYWRG+S+  M+ R+YGTAW  +++L  YL   EE++
Sbjct: 179 CRGPHVPSTGRIQ-VFHLLNVAGAYWRGNSDNAMMQRVYGTAWFDKKDLKAYLKRREEAK 237

Query: 243 KRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVL 300
           +RDHRKL +E+DLF +  E G G+ FW   G  I + L  Y+  ++I   Y+ + TP + 
Sbjct: 238 ERDHRKLGKELDLFMVNPEVGQGLPFWLPNGATIRRELERYIVDKEIASGYQHVYTPPMA 297

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
               ++ SGHWD YR +MF        + D   F L+PMNCP H+ V+ H + SYRELP+
Sbjct: 298 SVEFYKTSGHWDHYREDMFPTM----DMGDGEEFVLRPMNCPHHIEVYKHHVHSYRELPI 353

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G ++R E SG+L GL RVR  T +DAH+F T EQ+ +E LK  NLI  IY+DF  
Sbjct: 354 RIAELGMMHRYEKSGALTGLQRVREMTLNDAHIFVTPEQIKDEFLKALNLIAEIYEDFNL 413

Query: 421 EKIMVKLSTR-PE---KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
                +LS R PE   K   +D +W++A+ ++K  +D         ++     GE AFYG
Sbjct: 414 TDYRFRLSYRDPEDKHKYYDNDEMWENAQAMLKEAMDDFG------LDYFEAEGEAAFYG 467

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK +  +K A+G +    TIQ+DF LP RF+  Y+ +  E+  P+MIHR    ++ERF  
Sbjct: 468 PKLDIQVKTALGNEETLSTIQLDFLLPERFDLKYIGADGEEHRPIMIHRGGISTMERFTA 527

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKI 595
           I+IE +KG  P WL+P Q  V  I++ A ++YA E+A +LK   +  E D RNE + YKI
Sbjct: 528 ILIETYKGAFPTWLAPQQVSVIPISNEAHIDYAWEVARVLKDRGIRAEVDDRNEKMQYKI 587

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           R    +KIP  +I GDKE  E+++ +RR+GS  T+  S+
Sbjct: 588 RAAQTQKIPYQLIVGDKEMEEKAVNVRRYGSKATETKSI 626


>gi|257791654|ref|YP_003182260.1| threonyl-tRNA synthetase [Eggerthella lenta DSM 2243]
 gi|257475551|gb|ACV55871.1| threonyl-tRNA synthetase [Eggerthella lenta DSM 2243]
          Length = 637

 Score =  536 bits (1381), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 274/623 (43%), Positives = 404/623 (64%), Gaps = 15/623 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           + +  PDGS K     +T +DVA SI   LAK A+A  +N +  DLS PV EG S+ I+T
Sbjct: 1   MNIVLPDGSNKGLADGSTVADVAASIGAGLAKAALAGIVNDQPVDLSAPVAEGDSVAIVT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +    L ++RHS AH+MA A+  ++ +VQ  +GP IEDGFYYD   ++  S D+ A IE
Sbjct: 61  AKSDEGLELLRHSTAHVMAAALVDLYGDVQFGVGPAIEDGFYYDVKLDRALSPDDFAAIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M EI+  D  F ++ ++  +A E+F S+   +K+E++  +P    +T Y  G++ DLC
Sbjct: 121 ARMAEIVKADEAFERRVVTRAEAEEIFASQP--FKLELIAELPEDAVITTYTIGKFTDLC 178

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG++  F KL K+AGAYWRGD+ R ML+RIYGTA+  Q+EL ++L  LEE+EK
Sbjct: 179 RGPHLPSTGKLGAF-KLTKLAGAYWRGDAEREMLTRIYGTAFFKQKELDEHLRNLEEAEK 237

Query: 244 RDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           RDHRKL RE+ ++ +    G G+  +  KG ++ +T+  ++RR + +  YEE+ TP V +
Sbjct: 238 RDHRKLGRELGIYTMDPLAGVGLPMYLPKGARVIRTMQEWLRRDLYERGYEEVITPHVYN 297

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKD--LRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             +W+ SGH+  Y+ NM+     + T +D  L  +A+KPMNCPGHV ++   L SYR+LP
Sbjct: 298 ADVWKTSGHYGFYKENMYFFNINEGTDEDPRLTEYAVKPMNCPGHVMLYKSELHSYRDLP 357

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R  EFG+VYR+E SG +HGL+R RGFTQDDAHVFCT++Q+ +E + I +L+  I   FG
Sbjct: 358 LRYFEFGTVYRHEMSGVVHGLLRARGFTQDDAHVFCTRDQVVDEVVAILDLVDHIMSTFG 417

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F+    ++STRPEK +G+D +W+ A N +K      +  ++  +   +  G+GAFYGPK 
Sbjct: 418 FQ-YEAEISTRPEKSIGTDDMWEHATNALK------EACARHELAYDINEGDGAFYGPKI 470

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +  +KDAIGR WQC T+QVDFN+P RF   Y    + +  P M+HRA+FGSIERF+GI+I
Sbjct: 471 DIKVKDAIGRTWQCSTVQVDFNMPERFELTYRTEDNTEERPWMLHRAIFGSIERFLGILI 530

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E++ G LPLWL+P+Q  V  +     E A E+A  LK+    IE   +NE +  KI +  
Sbjct: 531 EHYAGALPLWLAPVQVAVLPLADRHNEAAAELAKQLKAAGGRIEVYDQNEPMRVKIAKAQ 590

Query: 600 IKKIPIIIICGDKEASERSIGIR 622
            +KIP +++ GDKE    ++ +R
Sbjct: 591 SQKIPYMVVLGDKEIENGTVSVR 613


>gi|317487879|ref|ZP_07946471.1| threonyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA]
 gi|325830610|ref|ZP_08164031.1| threonine--tRNA ligase [Eggerthella sp. HGA1]
 gi|316913005|gb|EFV34522.1| threonyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA]
 gi|325487356|gb|EGC89798.1| threonine--tRNA ligase [Eggerthella sp. HGA1]
          Length = 637

 Score =  536 bits (1381), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 274/623 (43%), Positives = 404/623 (64%), Gaps = 15/623 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           + +  PDGS K     +T +DVA SI   LAK A+A  +N +  DLS PV EG S+ I+T
Sbjct: 1   MNIVLPDGSKKELADGSTVADVAASIGAGLAKAALAGIVNDQPVDLSAPVAEGDSVAIVT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +    L ++RHS AH+MA A+  ++ +VQ  +GP IEDGFYYD   ++  S D+ A IE
Sbjct: 61  AKSDEGLELLRHSTAHVMAAALVDLYGDVQFGVGPAIEDGFYYDVKLDRALSPDDFAAIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M EI+  D  F ++ ++  +A E+F S  + +K+E++  +P    +T Y  G++ DLC
Sbjct: 121 ARMAEIVKADEAFERRVVTRAEAEEIFAS--QPFKLELIAELPEDAVITTYTIGKFTDLC 178

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG++  F KL K+AGAYWRGD+ R ML+RIYGTA+  Q+EL ++L  LEE+EK
Sbjct: 179 RGPHLPSTGKLGAF-KLTKLAGAYWRGDAEREMLTRIYGTAFFKQKELDEHLRNLEEAEK 237

Query: 244 RDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           RDHRKL RE+ ++ +    G G+  +  KG ++ +T+  ++RR + +  YEE+ TP V +
Sbjct: 238 RDHRKLGRELGIYTMDPLAGVGLPMYLPKGARVIRTMQEWLRRDLYERGYEEVITPHVYN 297

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKD--LRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             +W+ SGH+  Y+ NM+     + T +D  L  +A+KPMNCPGHV ++   L SYR+LP
Sbjct: 298 ADVWKTSGHYGFYKENMYFFNINEGTDEDPRLTEYAVKPMNCPGHVMLYKSELHSYRDLP 357

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R  EFG+VYR+E SG +HGL+R RGFTQDDAHVFCT++Q+ +E + I +L+  I   FG
Sbjct: 358 LRYFEFGTVYRHEMSGVVHGLLRARGFTQDDAHVFCTRDQVVDEVVAILDLVDHIMSTFG 417

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F+    ++STRPEK +G+D +W+ A N +K      +  ++  +   +  G+GAFYGPK 
Sbjct: 418 FQ-YEAEISTRPEKSIGTDDMWEHATNALK------EACARHELAYDINEGDGAFYGPKI 470

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +  +KDAIGR WQC T+QVDFN+P RF   Y    + +  P M+HRA+FGSIERF+GI+I
Sbjct: 471 DIKVKDAIGRTWQCSTVQVDFNMPERFELTYRTEDNTEERPWMLHRAIFGSIERFLGILI 530

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E++ G LPLWL+P+Q  V  +     E A E+A  LK+    IE   +NE +  KI +  
Sbjct: 531 EHYAGALPLWLAPVQVAVLPLADRHNEAAHELAKQLKAAGGRIEVYDQNEPMRVKIAKAQ 590

Query: 600 IKKIPIIIICGDKEASERSIGIR 622
            +KIP +++ GDKE    ++ +R
Sbjct: 591 SQKIPYMVVLGDKEIENGTVSVR 613


>gi|228478293|ref|ZP_04062901.1| threonyl-tRNA synthetase [Streptococcus salivarius SK126]
 gi|228249972|gb|EEK09242.1| threonyl-tRNA synthetase [Streptococcus salivarius SK126]
          Length = 648

 Score =  536 bits (1381), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 271/641 (42%), Positives = 412/641 (64%), Gaps = 25/641 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           I +TFPDG+++ F    T  D+A+SIS SLAKKA+A   NGK+ D +  + E GSIEI+T
Sbjct: 2   INITFPDGAVREFESGVTTFDIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGSIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQI 122
           P+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D E    S+++L +I
Sbjct: 62  PDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNEAGQISNEDLPRI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWFD 181
           E++M++I+  + P +++ ++ ++ARE+F  K + YK+E++E     E  +T+YRQGE+ D
Sbjct: 122 EEEMKKIVKENFPSIREEVTKDEAREIF--KNDPYKLELIEEHSEDEGGLTIYRQGEYVD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++  F L+ VAGAYWRG+S+  M+ RIYGTAW  +++L  YL  LEE+
Sbjct: 180 LCRGPHVPSTGRIQ-VFHLLNVAGAYWRGNSDNAMMQRIYGTAWFDKKDLKAYLKRLEEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+++ G G+ FW   G  I + L  Y+  +++   Y+ + TP +
Sbjct: 239 KERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRVLERYIVDKEVAAGYQHVYTPPI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHWD YR +MF        + D   F L+PMNCP H+ V+ H + SYRELP
Sbjct: 299 ASVELYKTSGHWDHYREDMFPTM----DMGDGEAFVLRPMNCPHHIEVYKHHVHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  + +D H F T EQ+ +E  +   LII +Y+DF 
Sbjct: 355 IRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHTFVTPEQIKDEFQRTLQLIIDVYEDFN 414

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R      K   +D +W++A++++K  +D ++      ++     GE AFY
Sbjct: 415 LTDYRFRLSYRDPKDTHKYFDNDEMWENAQSMLKSAMDDME------LDYFEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G +    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF 
Sbjct: 469 GPKLDIQVKTALGNEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMIHRGVISTMERFT 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IEN+KG  P WL+P Q  V  +++ A  +YA E+A  L+   + +E D RNE + YK
Sbjct: 529 AILIENYKGAFPTWLAPQQVTVIPVSNEAHTDYAWEVAKQLRDRGIRVEVDERNEKMQYK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFG--STTTQKVS 633
           IR    +KIP  +I GDKE  + ++ +RR+G   T T+ VS
Sbjct: 589 IRASQTQKIPYQLIVGDKEMEDGTVNVRRYGQKQTHTEAVS 629


>gi|308174589|ref|YP_003921294.1| threonyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|307607453|emb|CBI43824.1| threonyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|328554512|gb|AEB25004.1| threonyl-tRNA synthetase [Bacillus amyloliquefaciens TA208]
          Length = 643

 Score =  536 bits (1381), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 263/646 (40%), Positives = 414/646 (64%), Gaps = 20/646 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSI 59
           M   I +TFPDG++K FP  +T  D+A SIS  L KK++A  +NG+  DL  P++E G++
Sbjct: 1   MSDMINITFPDGAVKEFPKGSTTEDIAASISPGLKKKSLAGKLNGQEIDLRTPIQEDGAV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT      L ++RHS AH++A+A++ I+ +V+  +GP+IE+GFYYD + EQ  + D+L
Sbjct: 61  EIITEGTEEGLNIMRHSTAHLLAQAIKRIYKDVKFGVGPVIENGFYYDVEMEQALTPDDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IEK+M+ I+  + P +++ +S ++A+ +F    +  K+E+L++IP  E V++Y QGE+
Sbjct: 121 PKIEKEMKRIVGENLPIIRKEVSRDEAKSMFAEIGDNLKLELLDAIPEDETVSIYEQGEF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRG HV STG++K+ FKL+ +AGAYWRGDS   ML RIYGTA+  + +L ++L  LE
Sbjct: 181 FDLCRGVHVPSTGKIKE-FKLLSLAGAYWRGDSKNQMLQRIYGTAFFKKDDLKEHLRMLE 239

Query: 240 ESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTP 297
           E+++RDHRKL +E+ LF  ++  G G+  W  KG  I + +  Y+  +++   YE + TP
Sbjct: 240 EAKERDHRKLGKELKLFANSQKVGQGLPLWLPKGATIRRVIERYIVDKELSLGYEHVYTP 299

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +  + L++ SGHW+ Y+  MF     D+      T  L+PMNCP H+ ++   + SYRE
Sbjct: 300 VLGSKDLYETSGHWEHYQDGMFPPMEMDN-----ETLVLRPMNCPHHMMIYKQDIHSYRE 354

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+  E ++   LI  +Y+D
Sbjct: 355 LPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEEFIRTVRLIQDVYED 414

Query: 418 FGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           FG      +LS R     EK    D +W+ A++++K  +D I +   +        GE A
Sbjct: 415 FGLSDYTFRLSYRDPEDTEKYFDDDDMWNKAQSMLKAAMDEIGHDYYE------AEGEAA 468

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  +K AIG++    T+Q+DF LP RF+  YV    ++  PV+IHR V  ++ER
Sbjct: 469 FYGPKLDVQVKTAIGKEETLSTVQLDFLLPERFDLTYVGEDGKQHRPVVIHRGVVSTMER 528

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETIN 592
           F+  +IE  KG LP WL+P+Q  V  ++ S  ++YA+++   L+   L +E D R+E I 
Sbjct: 529 FVAFLIEEHKGALPTWLAPVQFQVIPVSPSVHLDYAKKVQERLQREGLRVELDSRDEKIG 588

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           YKIRE  ++KIP +++ GD+EA   ++ +R++G   ++ VSL D +
Sbjct: 589 YKIREAQMQKIPYMLVVGDQEAENGAVNVRKYGEQKSETVSLDDFV 634


>gi|257067150|ref|YP_003153406.1| threonyl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
 gi|256799030|gb|ACV29685.1| threonyl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
          Length = 640

 Score =  536 bits (1381), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 266/643 (41%), Positives = 397/643 (61%), Gaps = 17/643 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           IK+  PDGS+K +       DV + IS  L + AV   +NG++   ++P+ E S   ++ 
Sbjct: 2   IKIKLPDGSVKEYESGVLVGDVTKDISMGLFRAAVGAVVNGEIKGFAEPIEEDSDFRVVK 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            ED     +  H+ +H+MA A++ ++PE + AIGP I+DGFYYD D E  F+ ++L +IE
Sbjct: 62  FEDKEGKEIFWHTSSHVMAAAIKEMYPETKFAIGPAIDDGFYYDMDLEHRFTPEDLEKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF-DL 182
           KKM EI  RD    +  +S  +A E F+ + + YKVE++E +P  E +TLY+ G+ F DL
Sbjct: 122 KKMLEIAKRDLKLERVEISRAEALEKFKEEGQDYKVELIEDLPEDEKITLYKMGDAFTDL 181

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ ST  +K   KL  +AGAYWRGDS+R ML RIYG ++   ++L +Y    +E E
Sbjct: 182 CRGPHLLSTKAIKAV-KLKTIAGAYWRGDSDRQMLQRIYGISFEKAKQLEEYEELQKEIE 240

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLD 301
           KRDHRK+ REM+LF   E+G G  F+H  G  +   L+ +    + ++ Y EI TP +L+
Sbjct: 241 KRDHRKIGREMNLFTFHEEGPGFPFFHPNGMILMNELLGWWTDVLNENGYGEIKTPLILN 300

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW +SGHWD Y+ NM+  K       D   +A+KPMNCPG V  +     SYR+LP+R
Sbjct: 301 EDLWHRSGHWDHYKENMYFTKI------DGEAYAIKPMNCPGSVLTYASNQHSYRDLPIR 354

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAE+G V+R+E SG+LHGL RVR FTQDDAHV+C   Q+  E  ++ +L   +Y  FGF 
Sbjct: 355 LAEYGQVHRHELSGTLHGLFRVRTFTQDDAHVYCLPSQIKEEVYRMIDLADLLYSTFGF- 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
           K  ++LSTRP+  +G    WD AE+ +K  L+      +  I   +  G+GAFYGPK ++
Sbjct: 414 KYTIELSTRPDDFMGDIKDWDFAEDQLKKALE------ERGIEYEINPGDGAFYGPKIDF 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L DA  R+WQCGTIQ+DF LP  F+  Y++ + EK  PVM+HRA+ GSIERFIG++ E+
Sbjct: 468 HLLDAAKREWQCGTIQLDFQLPQNFDLTYIDENGEKQRPVMLHRALLGSIERFIGVLTEH 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           F G  PLWL+P Q  +  ++   ++Y +++   +K     +  D+R+E + YKIR+  + 
Sbjct: 528 FAGRFPLWLNPQQVEIIPVSDKFIDYCEDLKEKIKEAGFRVNIDYRSEGVGYKIRQAQLM 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +   +++ G+KE +   + +R      T  VS+ + I  ++KE
Sbjct: 588 RTNYMLVVGEKEETSGKLTVRNRDGEETADVSVDEFIEKISKE 630


>gi|284037110|ref|YP_003387040.1| threonyl-tRNA synthetase [Spirosoma linguale DSM 74]
 gi|283816403|gb|ADB38241.1| threonyl-tRNA synthetase [Spirosoma linguale DSM 74]
          Length = 647

 Score =  536 bits (1381), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 273/654 (41%), Positives = 410/654 (62%), Gaps = 31/654 (4%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           I++T PDGS++ +P  +TG D+A  IS  LA+  +A  +NG + D + P+ E  S++++T
Sbjct: 8   IRVTLPDGSVREYPKGSTGLDIATKISEGLARNVLAAKVNGVIQDATRPIDEDASVQLLT 67

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQI 122
             D    A   HS AH++AEA++S++P V+  IGP IE GFYYD D   QPFS ++  ++
Sbjct: 68  WNDAEGKATFWHSSAHLLAEALESLYPGVKFGIGPAIETGFYYDVDLGGQPFSQEDFKKV 127

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E KM E+  +   ++++ +S   A   FE K + YK+++LE +     +T Y QG++ DL
Sbjct: 128 EDKMLELARQKQQYIRKPMSKADAIAYFEEKGDPYKLDLLEGL-DDGTITFYTQGDFTDL 186

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ +TG +K   KLM VAGAYWRG+     L+RIY   +  Q+EL  YL+ LEE++
Sbjct: 187 CRGPHIPNTGFIKAA-KLMNVAGAYWRGNEKNKQLTRIYAVTYPKQKELDDYLFLLEEAK 245

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           KRDHRKL +E++LF  +E  G+G+  W  KG  + + L +++R+ +++  Y  + TP + 
Sbjct: 246 KRDHRKLGKELELFAFSEKVGAGLPLWLPKGTVLRERLENFLRKAQVRAGYSPVVTPHIG 305

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT------FALKPMNCPGHVAVFNHGLKS 354
            + L+  SGHW+ Y          +D+ + +RT      F LKPMNCP H  ++    +S
Sbjct: 306 SKQLYVTSGHWEKY---------GEDSFQPIRTPDPNEEFLLKPMNCPHHCEIYKTKPRS 356

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YR+LP+RLAEFG+VYR E SG LHGL RVRGFTQDDAH+FC  +Q+  E +K+ +L++ +
Sbjct: 357 YRDLPLRLAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCRPDQVKEEFMKVIDLVLYV 416

Query: 415 YKDFGFEKIMVKLSTR-PE---KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
           +   GF     ++S R PE   K +GSD LW+      K     I+ +++  + T   LG
Sbjct: 417 FNTLGFSDYSAQISLRDPENKTKYIGSDDLWE------KAESAIIEAAAEKGLPTVTELG 470

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           E AFYGPK +++++DAIGR WQ GTIQVD+NLP+RF   Y+ + ++K  PVMIHRA FGS
Sbjct: 471 EAAFYGPKLDFMVRDAIGRKWQLGTIQVDYNLPNRFELEYIGADNQKHRPVMIHRAPFGS 530

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
           +ERFI I+IEN  GN PLWLSP Q  +  I+    +YA ++   L+ + +    D R+E 
Sbjct: 531 MERFIAILIENSGGNFPLWLSPDQIAILPISEKYEDYANDLFFSLQENDIRGFVDLRDEK 590

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           I  KIR+  + K+P ++I G+KEA+E ++ +RR G      + + D I    +E
Sbjct: 591 IGRKIRDAEVNKVPYMLIVGEKEAAEGTVSVRRKGQGDLGSMPIADFIQTFKRE 644


>gi|197122302|ref|YP_002134253.1| threonyl-tRNA synthetase [Anaeromyxobacter sp. K]
 gi|238689843|sp|B4UAM8|SYT_ANASK RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|196172151|gb|ACG73124.1| threonyl-tRNA synthetase [Anaeromyxobacter sp. K]
          Length = 650

 Score =  536 bits (1380), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 274/657 (41%), Positives = 395/657 (60%), Gaps = 17/657 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSD-VAESISRSLAKKAVAVAINGKVCDLSDPV-REGS 58
           M   +K+T PDGS K  P      D V   I   LAK A    ++G+  DLS  + R+  
Sbjct: 1   MSDLVKVTLPDGSQKEAPRGTPVIDFVKGQIGPGLAKAAYFARLDGEPVDLSRAIERDAR 60

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           +EI+T   P +L V RH  AH+MA  VQ ++P  QV IGP IEDGFYYDF +E PF+ ++
Sbjct: 61  LEIVTTRSPEALEVARHDAAHVMASVVQKLYPGTQVTIGPAIEDGFYYDFARETPFTPED 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK--ENVTLYRQ 176
           L +IEK   E I  D PF++  +S E A  LFE   E YKVEI++ I AK  + +TLY+ 
Sbjct: 121 LERIEKATNEAIKADLPFVRSEISMEAALALFEGMGERYKVEIVKDIAAKGAKTLTLYKH 180

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           G+W D C GPH  STG++    KL+ VAGAYWRGD+   ML RIYGTA+  ++EL  +L 
Sbjct: 181 GDWVDFCLGPHGPSTGRIG-VVKLLNVAGAYWRGDAKNAMLQRIYGTAFFDKKELDAHLA 239

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEIN 295
            LEE +KRDHR+L  ++ LF   E   G  FW   G  ++  L   MRR + K+ Y+E+ 
Sbjct: 240 KLEEVKKRDHRRLGPQLGLFTFHEFAPGAPFWLPAGTVLYNVLEDAMRRLVLKNGYQEVK 299

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADD----TIKDLRTFALKPMNCPGHVAVFNHG 351
           TP + ++ LW+ SGHW  YR NMF V  ++      ++D  +F+LKPMNCP H  ++   
Sbjct: 300 TPLLFNKRLWETSGHWGKYRENMFLVVDSESDPALPLEDRCSFSLKPMNCPSHHLIYRMD 359

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI 411
            +SYRELPVR     +++RNE SGSL GL RVR F QDDAH++  +EQ+ +E L+I  L+
Sbjct: 360 KRSYRELPVRYFTTDALHRNEASGSLGGLTRVRQFEQDDAHIYLREEQVTDEVLRIFELM 419

Query: 412 ISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
             +Y  FG        STRPE+R+G DALWD AE +++  LD         +   +  G+
Sbjct: 420 KVVYGAFGL-GFEATFSTRPEQRIGDDALWDRAEALLRKSLDATG------LKWTLNAGD 472

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
           GAFYGPK + ++ D++GR WQ  TIQ+D+  P RF+  +V   +++  PV+IHRA++GS 
Sbjct: 473 GAFYGPKIDMLVTDSLGRKWQTCTIQLDYAAPERFDLTFVGEDNKEHRPVVIHRAIYGSF 532

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           ERF+ I++E++ G  P WL+P+QA V T++     +A+E    L++    +E D  ++ +
Sbjct: 533 ERFVAILVEHYAGAFPAWLAPVQARVVTVSDRFEAWAREAGEALQARGWRVEVDASSDKL 592

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
             KIR   + KIP  ++ G+KE   + +  RR G    + + L     ++T+E+  P
Sbjct: 593 GAKIRNAQLAKIPFTLVVGEKEVEAKGVSPRRHGGEDLKTMPLEAFAELMTREATAP 649


>gi|170287992|ref|YP_001738230.1| threonyl-tRNA synthetase [Thermotoga sp. RQ2]
 gi|238688803|sp|B1L7W6|SYT_THESQ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|170175495|gb|ACB08547.1| threonyl-tRNA synthetase [Thermotoga sp. RQ2]
          Length = 640

 Score =  536 bits (1380), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 279/648 (43%), Positives = 411/648 (63%), Gaps = 26/648 (4%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           IK+  PDG  K +    T +++A+ +     KKA+   +NG++ DL  P+  +  + ++T
Sbjct: 3   IKVKLPDGKEKEYDRGITPAEIAKELG---VKKAIGAVVNGELWDLKRPIENDCELRLVT 59

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPE--VQVAIGPIIEDGFYYDFD-KEQPFSSDELA 120
            EDP +    RH+ AHI+A+AV  I+ +  V++ IGP IE+GFYYDFD K    + ++L 
Sbjct: 60  LEDPEAPEFYRHTMAHILAQAVMRIYGKENVKLGIGPTIENGFYYDFDIKNGRLTEEDLP 119

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IE++M++II  + P  ++ +S E+AR+LF +  + YK+E++E I   + VT+YRQGE+ 
Sbjct: 120 KIEQEMKKIIKENLPIERKEISKEEARKLFNN--QPYKLELIEEIEG-DRVTIYRQGEFV 176

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ STG VK F KL+ V+GAYWRG    PML+R+YGTA+  +++L  YL FLEE
Sbjct: 177 DLCRGPHLPSTGIVKHF-KLLSVSGAYWRGSEKNPMLTRVYGTAFAKKEDLDNYLKFLEE 235

Query: 241 SEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           +++RDHRKL   ++LF +  E   G+ F+  KG  +   L+ + R   ++  Y+EI TP 
Sbjct: 236 AQRRDHRKLGPHLELFMLNTEYAPGMPFFLPKGVVVLNELMKFSRELHRERGYQEIFTPL 295

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++++ LW+ SGHWD Y  NM+ ++      KD   +A+KPMNCPGH+ V+     SYR+L
Sbjct: 296 IMNEQLWKISGHWDHYAENMYFIE------KDEERYAVKPMNCPGHILVYKSRTVSYRDL 349

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R  EFG V+R E SG LHGLMRVR FTQDDAH+FCT  Q+  E L + +LI +IY  F
Sbjct: 350 PLRFFEFGRVHRYERSGVLHGLMRVRSFTQDDAHIFCTPGQIEEEILGVLDLINTIYSQF 409

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF    V+LST PE  +G +A+W+ A   +K  L+    S   ++N G    EGAFYGPK
Sbjct: 410 GF-TYRVELSTMPEDHMGDEAIWEKATTALKNALERAGLSY--KVNEG----EGAFYGPK 462

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++ ++D+IGR+WQC TIQ+DF +P +FN  Y+   +++   VMIHRA++GS+ERF GI+
Sbjct: 463 IDFHIRDSIGREWQCATIQLDFMMPEKFNVTYIGPDNKEHRAVMIHRAIYGSLERFFGIL 522

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+F G  P WL+PIQ  V  I+    + A++IA  +      +  D R ET+ Y+IR+ 
Sbjct: 523 IEHFAGAFPTWLAPIQVAVIPISEKHNDGAEKIAKRISQEGFRVFFDNRRETLGYRIRQA 582

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
             +KIP +II GDKE     I +R       + V L   +  L  E L
Sbjct: 583 QTQKIPYMIILGDKELESGKISVRTRTGKEIKDVDLEHFVETLRNEVL 630


>gi|289548737|ref|YP_003473725.1| threonyl-tRNA synthetase [Thermocrinis albus DSM 14484]
 gi|289182354|gb|ADC89598.1| threonyl-tRNA synthetase [Thermocrinis albus DSM 14484]
          Length = 645

 Score =  536 bits (1380), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 271/625 (43%), Positives = 400/625 (64%), Gaps = 18/625 (2%)

Query: 23  GSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSCAHIM 81
           G+ + E    +  + A+A  +  ++ DL  PVREG  I+ I   DP SL V+RH+ +HIM
Sbjct: 18  GTPLGEVFRLAGVQDAIAGRLGDRILDLQTPVREGGKIKPIRKGDPESLEVMRHTLSHIM 77

Query: 82  AEAVQSIW--PEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQIEKKMQEIIARDSPFLK 138
           A+A++ I+    V + +GP  E+GFYYD + E      ++L  IE++M++I++R+ P ++
Sbjct: 78  AQALKEIYGYDRVHLGVGPTTEEGFYYDVEVEGISIREEDLPIIEERMRQIVSRNLPIVR 137

Query: 139 QYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFF 198
           Q +S E A +LFES KE YK++I+  I   + +++Y+QGE+ DLCRGPHV STG V  F 
Sbjct: 138 QEVSKEYALKLFESLKEPYKLDIINRIQEGDVISVYQQGEFVDLCRGPHVPSTGMVGAF- 196

Query: 199 KLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI 258
           KL  VAGAYW GD+++PML RIYG A+  ++EL   L F EE ++RDHRKL +E+++F I
Sbjct: 197 KLTHVAGAYWMGDASKPMLQRIYGIAYWDEKELEDRLRFYEEVKRRDHRKLGKELEMFMI 256

Query: 259 AED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
            E+ G+G++ W  KG    + L  Y R + +K  Y+ + TP + +  LWQ+SGH D YR 
Sbjct: 257 DEEIGAGLVIWLPKGGIYRKVLEDYWREEHLKRGYQLVYTPHIGNAKLWQKSGHLDHYRQ 316

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
           NMF     +D       + +KPMNCP H+A++   ++SYR+LP RLAE G+VYR E SG 
Sbjct: 317 NMFPPMELEDE-----EYFVKPMNCPFHIAIYKSKVRSYRDLPFRLAELGTVYRYEMSGV 371

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
           LHGLMRVRGFTQDDAH+ C  +Q+ +   +  +  IS+ +DFGF++  V +ST+PE  +G
Sbjct: 372 LHGLMRVRGFTQDDAHIICRPDQVDDVIQETLDFAISMLRDFGFDEFKVYISTKPEDAIG 431

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
           SD  W+ AE+ +K  ++++       +   +  G GAFYGPK +  ++DA+GR WQC TI
Sbjct: 432 SDEQWEKAESALKKAVESMG------LEYEIDEGGGAFYGPKIDVKIRDALGRLWQCSTI 485

Query: 497 QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI 556
           Q DFNLP RF+  YV   + +  P MIHRA+ GSIERF G+++E+  G LP WL+P+Q  
Sbjct: 486 QFDFNLPERFDMEYVGPDNRRHRPYMIHRAILGSIERFTGVLLEHHAGLLPFWLAPVQVR 545

Query: 557 VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASE 616
           V  +    VEYA+ +AN L+     +E D R+E +  KIR+  ++KIP ++I GDKE  +
Sbjct: 546 VLPVQERHVEYARSVANTLREEGFRVEVDERDERLGAKIRDAELQKIPYVLIVGDKEMQD 605

Query: 617 RSIGIRRFGSTTTQKVSLLDAIPIL 641
            S+ +R        K+SL D +  L
Sbjct: 606 GSVSVRGKREGDLGKMSLQDLLSFL 630


>gi|224499783|ref|ZP_03668132.1| threonyl-tRNA synthetase [Listeria monocytogenes Finland 1988]
          Length = 640

 Score =  535 bits (1379), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 265/638 (41%), Positives = 408/638 (63%), Gaps = 20/638 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           +K+TFPDG++K F    + +D+A SIS  L KKA+A  +NG++ DL  P+ E G+IEI+T
Sbjct: 1   MKITFPDGAVKEFKPGVSTADIAASISPGLKKKALAGKLNGELLDLVTPIHEDGAIEIVT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+   +L ++RHS AH+MA+A++ ++P+V+  +GP IE GFYYD D E   S + L +IE
Sbjct: 61  PDHEDALGILRHSTAHLMAQALKRLYPDVKFGVGPAIESGFYYDIDTEAVISDESLVEIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+MQ+I+  + P  ++ +S E+A + F++  + YK+E++E+IP  E VT+Y QGE+FDLC
Sbjct: 121 KEMQKIVRENVPIEREVVSREEAIKRFKAIGDQYKLELIEAIPEDETVTIYTQGEFFDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RG HV STG++ + FKL+ VAGAYWRGDSN  ML RIYGTA+  +  L +++   +E+++
Sbjct: 181 RGVHVPSTGKI-QVFKLLSVAGAYWRGDSNNKMLQRIYGTAFFDKNGLKEFIQMQKEAKE 239

Query: 244 RDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLD 301
           RDHRKL +E++LF +  E G G+  W  KG  I + +  Y+  ++ +  Y  + TP + +
Sbjct: 240 RDHRKLGKELELFTNSIEVGQGLPLWLPKGATIRRVIERYIVDKEERLGYNHVYTPIMAN 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             L++ SGHWD Y  +MF     D+         L+PMNCP H+ ++ + + SYRELP+R
Sbjct: 300 VELYKTSGHWDHYHEDMFPTMKMDN-----EELVLRPMNCPHHMMIYKNDIHSYRELPIR 354

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AE G ++R E SG+L GL RVRG T +DAHVF   +Q+ +E  ++  LI+ +YKDF   
Sbjct: 355 IAELGMMHRYEMSGALSGLQRVRGMTLNDAHVFVRPDQIKDEFKRVVELILEVYKDFDIT 414

Query: 422 KIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
               +LS R     EK    DA+W+ A+ ++K  +D ++      ++     GE AFYGP
Sbjct: 415 DYSFRLSYRDPKNTEKYFDDDAMWEKAQAMLKSAMDEME------MDYFEAEGEAAFYGP 468

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  +K AIG++    T+Q+DF LP RF+  Y+    EK  PV+IHR V  ++ERF+  
Sbjct: 469 KLDVQVKTAIGKEETLSTVQLDFLLPERFDLTYIGEDGEKHRPVVIHRGVVSTMERFVAY 528

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +IE +KG  P WL+P+Q  +  + + A ++YA+ + + L+   L  E D RNE + YKIR
Sbjct: 529 LIEEYKGAFPTWLAPVQMEIIPVNADAHLDYAKGVQDKLQRAGLRAEVDDRNEKLGYKIR 588

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           E   KKIP  ++ GD+E    S+ +RR+GS  ++ + L
Sbjct: 589 EAQTKKIPYALVLGDQEVEAGSVNVRRYGSKDSETMDL 626


>gi|16803599|ref|NP_465084.1| threonyl-tRNA synthetase [Listeria monocytogenes EGD-e]
 gi|224501501|ref|ZP_03669808.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL R2-561]
 gi|22654119|sp|Q8Y6X2|SYT_LISMO RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|16410988|emb|CAC99637.1| threonyl-tRNA synthetase [Listeria monocytogenes EGD-e]
          Length = 640

 Score =  535 bits (1379), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 265/638 (41%), Positives = 408/638 (63%), Gaps = 20/638 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           +K+TFPDG++K F    + +D+A SIS  L KKA+A  +NG++ DL  P+ E G+IEI+T
Sbjct: 1   MKITFPDGAVKEFEPGVSTADIAASISPGLKKKALAGKLNGELLDLVTPIHEDGAIEIVT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+   +L ++RHS AH+MA+A++ ++P+V+  +GP IE GFYYD D E   S + L +IE
Sbjct: 61  PDHEDALGILRHSTAHLMAQALKRLYPDVKFGVGPAIESGFYYDIDTEAVISDESLVEIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+MQ+I+  + P  ++ +S E+A + F++  + YK+E++E+IP  E VT+Y QGE+FDLC
Sbjct: 121 KEMQKIVRENVPIEREVVSREEAIKRFKAIGDQYKLELIEAIPEDETVTIYTQGEFFDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RG HV STG++ + FKL+ VAGAYWRGDSN  ML RIYGTA+  +  L +++   +E+++
Sbjct: 181 RGVHVPSTGKI-QVFKLLSVAGAYWRGDSNNKMLQRIYGTAFFDKNGLKEFIQMQKEAKE 239

Query: 244 RDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLD 301
           RDHRKL +E++LF +  E G G+  W  KG  I + +  Y+  ++ +  Y  + TP + +
Sbjct: 240 RDHRKLGKELELFTNSIEVGQGLPLWLPKGATIRRVIERYIVDKEERLGYNHVYTPIMAN 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             L++ SGHWD Y  +MF     D+         L+PMNCP H+ ++ + + SYRELP+R
Sbjct: 300 VELYKTSGHWDHYHEDMFPTMKMDN-----EELVLRPMNCPHHMMIYKNDIHSYRELPIR 354

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AE G ++R E SG+L GL RVRG T +DAHVF   +Q+ +E  ++  LI+ +YKDF   
Sbjct: 355 IAELGMMHRYEMSGALSGLQRVRGMTLNDAHVFVRPDQIKDEFKRVVELILEVYKDFDIT 414

Query: 422 KIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
               +LS R     EK    DA+W+ A+ ++K  +D ++      ++     GE AFYGP
Sbjct: 415 DYSFRLSYRDPKNTEKYFDDDAMWEKAQAMLKSAMDEME------MDYFEAEGEAAFYGP 468

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  +K AIG++    T+Q+DF LP RF+  Y+    EK  PV+IHR V  ++ERF+  
Sbjct: 469 KLDVQVKTAIGKEETLSTVQLDFLLPERFDLTYIGEDGEKHRPVVIHRGVVSTMERFVAY 528

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +IE +KG  P WL+P+Q  +  + + A ++YA+ + + L+   L  E D RNE + YKIR
Sbjct: 529 LIEEYKGAFPTWLAPVQMEIIPVNADAHLDYAKGVQDKLQRAGLRAEVDDRNEKLGYKIR 588

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           E   KKIP  ++ GD+E    S+ +RR+GS  ++ + L
Sbjct: 589 EAQTKKIPYALVLGDQEVEAGSVNVRRYGSKDSETMDL 626


>gi|77408338|ref|ZP_00785079.1| threonyl-tRNA synthetase [Streptococcus agalactiae COH1]
 gi|77173019|gb|EAO76147.1| threonyl-tRNA synthetase [Streptococcus agalactiae COH1]
          Length = 647

 Score =  535 bits (1379), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 279/639 (43%), Positives = 410/639 (64%), Gaps = 23/639 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+TFPDG+I+ F    T  ++A+SIS SLAKKA+A   NG++ D +  + E GSIEI+T
Sbjct: 2   IKITFPDGAIREFESGITTFEIAQSISNSLAKKALAGKFNGQLIDTTRAIEEDGSIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQI 122
           P+   +L V+RHS AH+ A+A + ++P++ + +GP I DGFYYD D K    S+D+L +I
Sbjct: 62  PDHEDALGVLRHSAAHLFAQAAKRLFPDLCLGVGPAIHDGFYYDTDNKSGQISNDDLPRI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E++M++I+  + P +++ +S E+A ELF  K + YKVE++ S  A++ +T+YRQGE+ DL
Sbjct: 122 EEEMKKIVKENHPCIREEISKEEALELF--KDDPYKVELI-SEHAEDGLTVYRQGEFVDL 178

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG+++  F L+ VAGAYWRG+S+  M+ R+YGTAW  +++L  YL   EE++
Sbjct: 179 CRGPHVPSTGRIQ-VFHLLNVAGAYWRGNSDNAMMQRVYGTAWFDKKDLKAYLKRREEAK 237

Query: 243 KRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVL 300
           +RDHRKL +E+DLF +  E G G+ FW   G  I + L  Y+  ++I   Y+ + TP + 
Sbjct: 238 ERDHRKLGKELDLFMVNPEVGQGLPFWLPNGATIRRELERYIVDKEIASGYQHVYTPPMA 297

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
               ++ SGHWD YR +MF        + D   F L+PMNCP H+ V+ H + SYRELP+
Sbjct: 298 SVEFYKTSGHWDHYREDMFPTM----DMGDGEEFVLRPMNCPHHIEVYKHHVHSYRELPI 353

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G ++R E SG+L GL RVR  T +DAH+F T EQ+ +E LK  NLI  IY+DF  
Sbjct: 354 RIAELGMMHRYEKSGALTGLQRVREMTLNDAHIFVTPEQIKDEFLKALNLIAEIYEDFNL 413

Query: 421 EKIMVKLSTR-PE---KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
                +LS R PE   K   +D +W++A+ ++K  +D         ++     GE AFYG
Sbjct: 414 TDYRFRLSYRDPEDKHKYYDNDEMWENAQAMLKEAMDDFG------LDYFEAEGEAAFYG 467

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK +  +K A+G +    TIQ+DF LP RF+  Y+ +  E+  P+MIHR    ++ERF  
Sbjct: 468 PKLDIQVKTALGNEETLSTIQLDFLLPERFDLKYIGADGEEHRPIMIHRGGISTMERFTA 527

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKI 595
           I+IE +KG  P WL+P Q  V  I++ A ++YA E+A  LK   +  E D RNE + YKI
Sbjct: 528 ILIETYKGAFPTWLAPQQVSVIPISNEAHIDYAWEVARALKDRGIRAEVDDRNEKMQYKI 587

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           R    +KIP  +I GDKE  E+++ +RR+GS  T+  S+
Sbjct: 588 RAAQTQKIPYQLIVGDKEMEEKAVNVRRYGSKATETKSI 626


>gi|284801950|ref|YP_003413815.1| threonyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284995092|ref|YP_003416860.1| threonyl-tRNA synthetase [Listeria monocytogenes 08-5923]
 gi|284057512|gb|ADB68453.1| threonyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284060559|gb|ADB71498.1| threonyl-tRNA synthetase [Listeria monocytogenes 08-5923]
          Length = 640

 Score =  535 bits (1379), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 265/638 (41%), Positives = 408/638 (63%), Gaps = 20/638 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           +K+TFPDG++K F    + +D+A SIS  L KKA+A  +NG++ DL  P+ E G+IEI+T
Sbjct: 1   MKITFPDGAVKEFEPGVSTADIAASISPGLKKKALAGKLNGELLDLVTPIHEDGAIEIVT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+   +L ++RHS AH+MA+A++ ++P+V+  +GP IE GFYYD D E   S + L +IE
Sbjct: 61  PDHEDALGILRHSTAHLMAQALKRLYPDVKFGVGPAIESGFYYDIDTEAVISDESLVEIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+MQ+I+  + P  ++ +S E+A + F++  + YK+E++E+IP  E VT+Y QGE+FDLC
Sbjct: 121 KEMQKIVRENVPIEREVVSREEAIKRFKAIGDQYKLELIEAIPEDETVTIYTQGEFFDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RG HV STG++ + FKL+ VAGAYWRGDSN  ML RIYGTA+  +  L +++   +E+++
Sbjct: 181 RGVHVPSTGKI-QVFKLLSVAGAYWRGDSNNKMLQRIYGTAFFDKNGLKEFIQMQKEAKE 239

Query: 244 RDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLD 301
           RDHRKL +E++LF +  E G G+  W  KG  I + +  Y+  ++ +  Y  + TP + +
Sbjct: 240 RDHRKLGKELELFTNSIEVGQGLPLWLPKGATIRRVIERYIVDKEERLGYNHVYTPIMAN 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             L++ SGHWD Y  +MF     D+         L+PMNCP H+ ++ + + SYRELP+R
Sbjct: 300 VELYKTSGHWDHYHEDMFPTMKMDN-----EELVLRPMNCPHHMMIYKNDIHSYRELPIR 354

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AE G ++R E SG+L GL RVRG T +DAHVF   +Q+ +E  ++  LI+ +YKDF   
Sbjct: 355 IAELGLMHRYEMSGALSGLQRVRGMTLNDAHVFVRPDQIKDEFKRVVELILEVYKDFDIT 414

Query: 422 KIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
               +LS R     EK    DA+W+ A+ ++K  +D ++      ++     GE AFYGP
Sbjct: 415 DYSFRLSYRDPKNTEKYFDDDAMWEKAQAMLKSAMDEME------MDYFEAEGEAAFYGP 468

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  +K AIG++    T+Q+DF LP RF+  Y+    EK  PV+IHR V  ++ERF+  
Sbjct: 469 KLDVQVKTAIGKEETLSTVQLDFLLPERFDLTYIGEDGEKHRPVVIHRGVVSTMERFVAY 528

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +IE +KG  P WL+P+Q  +  + + A ++YA+ + + L+   L  E D RNE + YKIR
Sbjct: 529 LIEEYKGAFPTWLAPVQMEIIPVNADAHLDYAKGVQDKLQRAGLRAEVDDRNEKLGYKIR 588

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           E   KKIP  ++ GD+E    S+ +RR+GS  ++ + L
Sbjct: 589 EAQTKKIPYALVLGDQEVEAGSVNVRRYGSKDSETMDL 626


>gi|239623178|ref|ZP_04666209.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239522545|gb|EEQ62411.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 643

 Score =  535 bits (1379), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 264/613 (43%), Positives = 392/613 (63%), Gaps = 21/613 (3%)

Query: 16  NFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIEIITP-----EDPRSL 70
           + P+ A G  + E++  +     ++  +N +     D  R  S++II P     E    L
Sbjct: 18  SLPIPADGHILRENMITTKDAGIISWGMNFQTRPREDE-RSNSMKIILPDGSVQEAEDEL 76

Query: 71  AVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEII 130
             IRH+ +H++A+AV+ ++PE ++AIGP I+DGFYYDFD+E  F+ ++L ++E +M +I+
Sbjct: 77  RAIRHTASHVLAQAVKRLYPETKLAIGPAIDDGFYYDFDREGGFTPEDLEKLEAEMTKIV 136

Query: 131 ARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRS 190
             + P     L  ++A    E K E YKVE+++ +P +E ++ Y+QGE+ DLC GPH+  
Sbjct: 137 KENLPVKPFVLPRDEAVRFMEEKSEPYKVELIQDLPDEETISFYQQGEFVDLCAGPHIMY 196

Query: 191 TGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLA 250
           T  VK F KL  +AGAYWRG     ML+RIYGTA++ + +L  YL  +EE++KRDHRKL 
Sbjct: 197 TKGVKAF-KLTSIAGAYWRGSEKNKMLTRIYGTAFSNKTDLENYLTMMEEAKKRDHRKLG 255

Query: 251 REMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSG 309
           +E+ LF  AE+G G  F+  KG  +  TLI Y R    ++ Y+E++TP +L + LW+ SG
Sbjct: 256 KELGLFMFAEEGPGFPFFLPKGMTLKNTLIDYWREIHQREGYQEVSTPIILSRKLWENSG 315

Query: 310 HWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVY 369
           HWD Y+ NM+       T+ D   +A+KPMNCPG + V+ +   SYR+LP+R+ E G V+
Sbjct: 316 HWDHYKDNMYT------TVIDEEDYAVKPMNCPGGMLVYKNQPHSYRDLPLRVGELGLVH 369

Query: 370 RNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
           R+E SG LHGLMRVR FTQDDAH+F   +Q+ +E   +  LI  +Y  FGFE   V+LST
Sbjct: 370 RHEKSGQLHGLMRVRCFTQDDAHIFMRDDQIEDEIKGVTRLINEVYTQFGFE-YFVELST 428

Query: 430 RPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGR 489
           RPE  +GSD  W+ A N +K  LD +       +   V  G+GAFYGPK ++ L+D++GR
Sbjct: 429 RPEDSMGSDEDWEMATNGLKKALDDMG------LEYIVNEGDGAFYGPKIDFHLRDSLGR 482

Query: 490 DWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW 549
            WQCGTIQ+DF +P RF+  Y      K  P+MIHR  FGSIERFIGI+IE+F G  P+W
Sbjct: 483 TWQCGTIQLDFQMPQRFDLEYTAEDGSKKRPIMIHRVCFGSIERFIGILIEHFAGKFPVW 542

Query: 550 LSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIIC 609
           L+P+Q  V  ++  ++EYA  +   LK+  +  E D ++E + YKIR+  ++K+P +++ 
Sbjct: 543 LAPVQVKVIPVSEKSMEYATGVYEKLKAAGIRTELDHKDEKVGYKIRQAQLEKVPYMLVL 602

Query: 610 GDKEASERSIGIR 622
           G+KEA+E +I +R
Sbjct: 603 GEKEAAEGAITVR 615


>gi|315303326|ref|ZP_07873955.1| threonyl-tRNA synthetase [Listeria ivanovii FSL F6-596]
 gi|313628306|gb|EFR96810.1| threonyl-tRNA synthetase [Listeria ivanovii FSL F6-596]
          Length = 640

 Score =  535 bits (1378), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 265/638 (41%), Positives = 407/638 (63%), Gaps = 20/638 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           +K+TFPDG++K F    + +D+A SIS  L KKA+A  +NG++ DL  P+ E G+IEI+T
Sbjct: 1   MKITFPDGAVKEFESGVSTADIAASISPGLKKKALAGKLNGELLDLVTPIHEDGAIEIVT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+   +L ++RHS AH+MA+A++ ++P+V+  +GP I+ GFYYD D     S + L +IE
Sbjct: 61  PDHEDALGILRHSTAHLMAQALKRLYPDVKFGVGPAIDSGFYYDIDTVAVISDESLVEIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+MQ+I+  + P  ++ +S E+A + F++  + YK+E++E+IPA E VT+Y QGE+FDLC
Sbjct: 121 KEMQKIVRENVPIEREVVSREEAIKRFKAIGDEYKLELIEAIPADETVTIYTQGEFFDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RG HV STG++ + FKL+ VAGAYWRGDSN  ML RIYGTA+  +  L +++   +E+++
Sbjct: 181 RGVHVPSTGKI-QVFKLLSVAGAYWRGDSNNKMLQRIYGTAFFDKNGLKEFIQMQKEAKE 239

Query: 244 RDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLD 301
           RDHRKL +E++LF +  E G G+  W  KG  I + +  Y+  ++ +  Y  + TP + +
Sbjct: 240 RDHRKLGKELELFTNSIEVGQGLPLWLPKGATIRRVIERYIVDKEERLGYNHVYTPIMAN 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             L++ SGHWD Y  +MF     D+         L+PMNCP H+ ++ + + SYRELP+R
Sbjct: 300 VELYKTSGHWDHYHEDMFPTMKMDN-----EELVLRPMNCPHHMMIYKNDIHSYRELPIR 354

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AE G ++R E SG+L GL RVRG T +DAHVF   +Q+ +E  ++  LI+ +YKDF   
Sbjct: 355 IAELGLMHRYEMSGALSGLQRVRGMTLNDAHVFVRPDQIKDEFKRVVELILEVYKDFDIT 414

Query: 422 KIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
               +LS R     EK    DA+WD A+ ++K  +D +     D        GE AFYGP
Sbjct: 415 DYSFRLSYRDPKNTEKYFDDDAMWDKAQTMLKSAMDEM---GMDYFEAD---GEAAFYGP 468

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  +K AIG++    T+Q+DF LP RF+  Y+    EK  PV+IHR V  ++ERF+  
Sbjct: 469 KLDVQVKTAIGKEETLSTVQLDFLLPERFDLTYIAEDGEKHRPVVIHRGVVSTMERFVAY 528

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +IE +KG  P WL+P+Q  +  + + A ++YA+ + + L+   L +E D RNE + YKIR
Sbjct: 529 LIEEYKGAFPTWLAPVQMELIPVNADAHLDYAKGVQDKLQRAGLRVEVDDRNEKLGYKIR 588

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           E   KKIP  ++ GD+E    ++ +RR+GS  ++ + L
Sbjct: 589 EAQTKKIPYALVLGDQEMESGTVNVRRYGSKDSETMDL 626


>gi|15643503|ref|NP_228549.1| threonyl-tRNA synthetase [Thermotoga maritima MSB8]
 gi|8928373|sp|Q9WZJ9|SYT_THEMA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|4981265|gb|AAD35821.1|AE001744_11 threonyl-tRNA synthetase [Thermotoga maritima MSB8]
          Length = 640

 Score =  535 bits (1378), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 273/624 (43%), Positives = 405/624 (64%), Gaps = 26/624 (4%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           IK+  PDG  K +    T +++A+ +     KKA+   +NG++ DL  P+  +  + ++T
Sbjct: 3   IKVKLPDGKEKEYDRGITPAEIAKELG---IKKAIGAVVNGELWDLKRPIENDCELRLVT 59

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPE--VQVAIGPIIEDGFYYDFD-KEQPFSSDELA 120
            EDP +    RH+ AHI+A+AV  ++ +  V++ IGP IE+GFYYDFD K    + ++L 
Sbjct: 60  LEDPEAPEFYRHTMAHILAQAVMRLYGKENVKLGIGPTIENGFYYDFDIKNGRLTEEDLP 119

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IE++M++II  + P  ++ +S E+ARELF  + + YK+E++E I     VT+YRQGE+ 
Sbjct: 120 KIEQEMKKIIKENLPIERKEISKEEARELF--RDQPYKLELIEEIEGN-RVTIYRQGEFV 176

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ STG VK F KL+ V+GAYWRG    PML+R+YGTA+  +++L  YL FLEE
Sbjct: 177 DLCRGPHLPSTGIVKHF-KLLSVSGAYWRGSEKNPMLTRVYGTAFAKKEDLDNYLKFLEE 235

Query: 241 SEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           +++RDHRKL  +++LF +  E   G+ F+  KG  +   L+ + R   ++  Y+EI TP 
Sbjct: 236 AQRRDHRKLGPQLELFMLNTEYAPGMPFFLPKGVVVLNELMKFSRELHRERGYQEIFTPL 295

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++++ LW+ SGHWD Y  NM+ ++      KD   +A+KPMNCPGH+ V+     SYR+L
Sbjct: 296 IMNEQLWKISGHWDHYAENMYFIE------KDEERYAVKPMNCPGHILVYKSRTVSYRDL 349

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R  EFG V+R E SG LHGLMRVR FTQDDAH+FCT +Q+  E L + +LI +IY  F
Sbjct: 350 PLRFFEFGRVHRYERSGVLHGLMRVRSFTQDDAHIFCTPDQIEEEILGVLDLINTIYSQF 409

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF    V+LST PE  +G +A+W+ A   +K  L+    S   ++N G    EGAFYGPK
Sbjct: 410 GF-TYRVELSTMPEDHMGDEAIWEKATTALKNALERAGLSY--KVNEG----EGAFYGPK 462

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++ ++D+IGR+WQC TIQ+DF +P +FN  Y+   +++   VMIHRA++GS+ERF GI+
Sbjct: 463 IDFHIRDSIGREWQCATIQLDFMMPEKFNVTYIGPDNKEHRAVMIHRAIYGSLERFFGIL 522

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+F G  P WL+PIQ  V  I+    + A+++A  +      +  D R ET+ Y+IR+ 
Sbjct: 523 IEHFAGAFPTWLAPIQVAVIPISEKHNDGAEKVARRISQEGFRVFFDNRRETLGYRIRQA 582

Query: 599 SIKKIPIIIICGDKEASERSIGIR 622
             +KIP +II GDKE     I +R
Sbjct: 583 QTQKIPYMIIIGDKELESGKISVR 606


>gi|220917084|ref|YP_002492388.1| threonyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
 gi|254783505|sp|B8J823|SYT_ANAD2 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|219954938|gb|ACL65322.1| threonyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 650

 Score =  535 bits (1378), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 273/657 (41%), Positives = 395/657 (60%), Gaps = 17/657 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSD-VAESISRSLAKKAVAVAINGKVCDLSDPV-REGS 58
           M   +K+T PDGS K  P      D V   I   LAK A    ++G+  DLS  + R+  
Sbjct: 1   MSDLVKVTLPDGSQKEAPRGTPVIDFVKGQIGPGLAKAAYFARLDGEPVDLSRAIERDAR 60

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           +EI+T  +P +L V RH  AH+MA  VQ ++P  QV IGP IEDGFYYDF +E PF+ ++
Sbjct: 61  LEIVTTRNPEALEVARHDAAHVMASVVQKLYPGTQVTIGPAIEDGFYYDFARETPFTPED 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK--ENVTLYRQ 176
           L +IEK   E I  D PF++  +S E A  LFE   E YKVEI++ I AK  + +TLY+ 
Sbjct: 121 LERIEKATNEAIKADLPFVRSEISMEAALALFEGMGERYKVEIVKDIAAKGAKTLTLYKH 180

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           G+W D C GPH  STG++    KL+ VAGAYWRGD+   ML RIYGTA+  ++EL  +L 
Sbjct: 181 GDWVDFCLGPHGPSTGRIG-VVKLLNVAGAYWRGDAKNAMLQRIYGTAFFDKKELDAHLA 239

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEIN 295
            LEE +KRDHR+L  ++ LF   E   G  FW   G  ++  L   MRR + K+ Y+E+ 
Sbjct: 240 KLEEVKKRDHRRLGPQLGLFTFHEFAPGAPFWLPAGTVLYNVLEDAMRRLVLKNGYQEVK 299

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADD----TIKDLRTFALKPMNCPGHVAVFNHG 351
           TP + ++ LW+ SGHW  YR NMF V  ++      ++D  +F+LKPMNCP H  ++   
Sbjct: 300 TPLLFNKRLWETSGHWGKYRENMFLVVDSESDPALPLEDRCSFSLKPMNCPSHHLIYRMD 359

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI 411
            +SYRELPVR     +++RNE SGSL GL RVR F QDDAH++  +EQ+ +E L+I  L+
Sbjct: 360 KRSYRELPVRYFTTDALHRNEASGSLGGLTRVRQFEQDDAHIYLREEQVTDEVLRIFELM 419

Query: 412 ISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
             +Y  FG        STRPE+R+G DALWD AE +++  LD         +   +  G+
Sbjct: 420 KVVYGAFGL-GFEATFSTRPEQRIGDDALWDRAEALLRKSLDATG------LKWTLNAGD 472

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
           GAFYGPK + ++ D++GR WQ  TIQ+D+  P RF+  +V   +++  PV+IHRA++GS 
Sbjct: 473 GAFYGPKIDMLVTDSLGRKWQTCTIQLDYAAPERFDLTFVGEDNKEHRPVVIHRAIYGSF 532

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           ERF+ I++E++ G  P WL+P+QA V T++     +A+E    L++    +E D  ++ +
Sbjct: 533 ERFVAILVEHYAGAFPAWLAPVQARVVTVSDRFEAWAREAGEALQARGWRVEVDASSDKL 592

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
             KIR   + KIP  ++ G+KE   + +  RR G    + + L     ++ +E+  P
Sbjct: 593 GAKIRNAQLAKIPFTLVVGEKEVEAKGVSPRRHGGEDLKTMPLETFAELMAREATAP 649


>gi|254828206|ref|ZP_05232893.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
 gi|258600595|gb|EEW13920.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
          Length = 640

 Score =  535 bits (1378), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 265/638 (41%), Positives = 408/638 (63%), Gaps = 20/638 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           +K+TFPDG++K F    + +D+A SIS  L KKA+A  +NG++ DL  P+ E G+IEI+T
Sbjct: 1   MKITFPDGAVKEFEPGVSTADIAASISPGLKKKALAGKLNGELLDLVTPIHEDGAIEIVT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+   +L ++RHS AH+MA+A++ ++P+V+  +GP IE GFYYD D E   S + L +IE
Sbjct: 61  PDHEDALGILRHSTAHLMAQALKRLYPDVKFGVGPAIESGFYYDIDTEAVISDESLVEIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+MQ+I+  + P  ++ +S E+A + F++  + YK+E++E+IP  E VT+Y QGE+FDLC
Sbjct: 121 KEMQKIVRENVPIEREVVSREEAIKRFKAIGDQYKLELIEAIPEDETVTIYTQGEFFDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RG HV STG++ + FKL+ VAGAYWRGDSN  ML RIYGTA+  +  L +++   +E+++
Sbjct: 181 RGVHVPSTGKI-QVFKLLSVAGAYWRGDSNNKMLQRIYGTAFFDKNGLKEFIQMQKEAKE 239

Query: 244 RDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLD 301
           RDHRKL +E++LF +  E G G+  W  KG  I + +  Y+  ++ +  Y  + TP + +
Sbjct: 240 RDHRKLGKELELFTNSIEVGQGLPLWLPKGATIRRVIERYIVDKEERLGYNHVYTPIMAN 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             L++ SGHWD Y  +MF     D+         L+PMNCP H+ ++ + + SYRELP+R
Sbjct: 300 VELYKTSGHWDHYHEDMFPTMKMDN-----EELVLRPMNCPHHMMIYKNDIHSYRELPIR 354

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AE G ++R E SG+L GL RVRG T +DAHVF   +Q+ +E  ++  LI+ +YKDF   
Sbjct: 355 IAELGMMHRYEMSGALSGLQRVRGMTLNDAHVFVRPDQIKDEFKRVVELILEVYKDFDIT 414

Query: 422 KIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
               +LS R     EK    DA+W+ A+ ++K  +D ++      ++     GE AFYGP
Sbjct: 415 DYSFRLSYRDPKNTEKYFDDDAMWEKAQAMLKSAMDEME------MDYFEAEGEAAFYGP 468

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  +K AIG++    T+Q+DF LP RF+  Y+    EK  PV+IHR V  ++ERF+  
Sbjct: 469 KLDVQVKTAIGKEETLSTVQLDFLLPERFDLTYIGEDGEKHRPVVIHRGVVSTMERFVAY 528

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +IE +KG  P WL+P+Q  +  + + A ++YA+ + + L+   L  E D RNE + YKIR
Sbjct: 529 LIEEYKGAFPTWLAPVQMELIPVNADAHLDYAKGVQDKLQRAGLRAEVDDRNEKLGYKIR 588

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           E   KKIP  ++ GD+E    S+ +RR+GS  ++ + L
Sbjct: 589 EAQTKKIPYALVLGDQEVEAGSVNVRRYGSKDSETMDL 626


>gi|315282482|ref|ZP_07870886.1| threonyl-tRNA synthetase [Listeria marthii FSL S4-120]
 gi|313613866|gb|EFR87606.1| threonyl-tRNA synthetase [Listeria marthii FSL S4-120]
          Length = 640

 Score =  535 bits (1378), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 267/638 (41%), Positives = 406/638 (63%), Gaps = 20/638 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           +K+TFPDG++K F    + +D+A SIS  L KKA+A   NG++ DL  P+ E G+IEI+T
Sbjct: 1   MKITFPDGAVKEFEPGVSTADIAASISPGLKKKALAGKFNGELLDLVTPIHEDGAIEIVT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+   +L ++RHS AH+MA+A++ ++P+V+  +GP IE GFYYD D E   S + L +IE
Sbjct: 61  PDHEDALGILRHSTAHLMAQALKRLYPDVKFGVGPAIESGFYYDIDTEAVISDESLVEIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+MQ+I+  + P  ++ +S E+A + F++  + YK+E++E+IP  E VT+Y QGE+FDLC
Sbjct: 121 KEMQKIVRENVPIEREVVSREEAIKRFKAIGDHYKLELIEAIPEDETVTIYTQGEFFDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RG HV STG++ + FKL+ VAGAYWRGDSN  ML RIYGTA+  +  L +++   +E+++
Sbjct: 181 RGVHVPSTGKI-QVFKLLSVAGAYWRGDSNNKMLQRIYGTAFFDKNGLKEFIQMQKEAKE 239

Query: 244 RDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLD 301
           RDHRKL +E+DLF +  E G G+  W  KG  I + +  Y+  ++ +  Y  + TP + +
Sbjct: 240 RDHRKLGKELDLFTNSIEVGQGLPLWLPKGATIRRVIERYIVDKEERLGYNHVYTPIMAN 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             L++ SGHWD Y  +MF     D+         L+PMNCP H+ ++ + + SYRELP+R
Sbjct: 300 VELYKTSGHWDHYHEDMFPTMKMDN-----EELVLRPMNCPHHMMIYKNDIHSYRELPIR 354

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AE G ++R E SG+L GL RVRG T +DAHVF   +Q+ +E  ++  LI+ +YKDF  +
Sbjct: 355 IAELGMMHRYEMSGALSGLQRVRGMTLNDAHVFVRPDQIKDEFKRVVELILEVYKDFDIK 414

Query: 422 KIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
               +LS R     EK    DA+W+ A++++K  +D +     D        GE AFYGP
Sbjct: 415 DYSFRLSYRDPKNTEKYFDDDAMWEKAQSMLKSAMDEM---GMDYFEAE---GEAAFYGP 468

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  +K AIG++    T+Q+DF LP RF+  Y+    EK  PV+IHR V  ++ERF+  
Sbjct: 469 KLDVQVKTAIGKEETLSTVQLDFLLPERFDLTYIGEDGEKHRPVVIHRGVVSTMERFVAY 528

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +IE +KG  P WL+P+Q  +  + + A + YA+ + + L+   L  E D RNE + YKIR
Sbjct: 529 LIEEYKGAFPTWLAPVQMELIPVNADAHLNYAKGVQDKLQRAGLRSEVDDRNEKLGYKIR 588

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           E   KKIP  ++ GD+E    S+ +RR+GS  ++ + L
Sbjct: 589 EAQTKKIPYALVLGDQEVEAGSVNVRRYGSKDSETMDL 626


>gi|296332117|ref|ZP_06874581.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305675488|ref|YP_003867160.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|296150888|gb|EFG91773.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305413732|gb|ADM38851.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 643

 Score =  535 bits (1378), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 262/646 (40%), Positives = 414/646 (64%), Gaps = 20/646 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSI 59
           M   +K+TFPDG++K F    T  D+A SIS  L KK++A  +NGK  DL  P+ E G++
Sbjct: 1   MSDMVKITFPDGAVKEFAKGTTTEDIAASISPGLKKKSLAGKLNGKEIDLRTPINEDGTV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT      L ++RHS AH++A+A++ I+ +V+  +GP+IE+GFYYD + E+  + ++L
Sbjct: 61  EIITEGSEEGLQIMRHSTAHLLAQAIKRIYKDVKFGVGPVIENGFYYDVEMEEAITPEDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IEK+M++I+  + P +++ +S E+A+  F    +  K+E+L++IP  E V++Y QGE+
Sbjct: 121 PKIEKEMKKIVNANLPIVRKEVSREEAKARFAEIGDDLKLELLDAIPEGETVSIYEQGEF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRG HV STG++K+ FKL+ +AGAYWRGDSN  ML R+YGTA+  + +L ++L  LE
Sbjct: 181 FDLCRGVHVPSTGKIKE-FKLLSLAGAYWRGDSNNQMLQRVYGTAFFKKADLEEHLRMLE 239

Query: 240 ESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTP 297
           E+++RDHRKL +E+ LF  ++  G G+  W  KG  I + +  Y+  ++I   YE + TP
Sbjct: 240 EAKERDHRKLGKELKLFANSQKVGQGLPLWLPKGATIRRVIERYIVDKEISLGYEHVYTP 299

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +  + L++ SGHWD Y+  MF     D+      T  L+PMNCP H+ ++   + SYRE
Sbjct: 300 VLGSKELYETSGHWDHYQEGMFPPMEMDN-----ETLVLRPMNCPHHMMIYKQDIHSYRE 354

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+ +E ++   LI  +Y+D
Sbjct: 355 LPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKDEFIRTVRLIQDVYED 414

Query: 418 FGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           FG      +LS R     EK    D +W+ A++++K  +D I +   +        GE A
Sbjct: 415 FGLSDYTFRLSYRDPEDTEKYFDDDEMWNKAQSMLKEAMDEIGHDYYE------AEGEAA 468

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  +K AIG++    T+Q+DF LP RF+  Y+    ++  PV+IHR V  ++ER
Sbjct: 469 FYGPKLDVQVKTAIGKEETLSTVQLDFLLPERFDLTYIGEDGKQHRPVVIHRGVVSTMER 528

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETIN 592
           F+  +IE  KG LP WL+P+Q  V  ++ S  ++YA+++   L+   L +E D R+E I 
Sbjct: 529 FVAFLIEEHKGALPTWLAPVQFQVIPVSPSVHLDYAKKVQERLQREGLRVEVDSRDEKIG 588

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           YKIRE  ++KIP +++ GD+EA   ++ +R++G   ++ +SL D +
Sbjct: 589 YKIREAQMQKIPYMLVVGDQEAENGAVNVRKYGEQNSETISLDDFV 634


>gi|289434839|ref|YP_003464711.1| hypothetical protein lse_1474 [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289171083|emb|CBH27625.1| thrS [Listeria seeligeri serovar 1/2b str. SLCC3954]
          Length = 640

 Score =  535 bits (1378), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 266/638 (41%), Positives = 408/638 (63%), Gaps = 20/638 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           +K+TFPDG+ K F    + +D+A SIS  L KKA+A  +NG++ DL  P+ E G+IEI+T
Sbjct: 1   MKITFPDGAEKEFEPGVSTADIAFSISPGLKKKALAGKLNGELLDLVTPIHEDGAIEIVT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+   +L ++RHS AH+MA+A++ ++P+V+  +GP I+ GFYYD D E   S + L +IE
Sbjct: 61  PDHEDALGILRHSTAHLMAQALKRLYPDVKFGVGPAIDSGFYYDIDTEAVISDESLVEIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+MQ+I+  + P  ++ +S E+A + F++  + YK+E++E+IPA E VT+Y QGE+FDLC
Sbjct: 121 KEMQKIVRENVPIEREVVSREEAIKRFKAIGDEYKLELIEAIPADETVTIYTQGEFFDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RG HV STG++ + FKL+ VAGAYWRGDSN  ML RIYGTA+  +  L +++   +E+++
Sbjct: 181 RGVHVPSTGKI-QVFKLLSVAGAYWRGDSNNKMLQRIYGTAFFDKNGLKEFIQMQKEAKE 239

Query: 244 RDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLD 301
           RDHRKL +E++LF +  E G G+  W  KG  I + +  Y+  ++ +  Y  + TP + +
Sbjct: 240 RDHRKLGKELELFTNSIEVGQGLPLWLPKGATIRRVIERYIVDKEERLGYNHVYTPIMAN 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             L++ SGHWD Y  +MF     D+         L+PMNCP H+ ++ + + SYRELP+R
Sbjct: 300 VELYKTSGHWDHYHEDMFPTMKMDN-----EELVLRPMNCPHHMMIYKNDIHSYRELPIR 354

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AE G ++R E SG+L GL RVRG T +DAHVF   +Q+ +E  ++  LI+ +YKDF  +
Sbjct: 355 IAELGMMHRYEMSGALSGLQRVRGMTLNDAHVFVRPDQIKDEFKRVVELILEVYKDFDIK 414

Query: 422 KIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
               +LS R     EK    DA+WD A+ ++K  +D +     D        GE AFYGP
Sbjct: 415 DYSFRLSYRDPKNTEKYFDDDAMWDKAQAMLKSAMDEM---GMDYFEAD---GEAAFYGP 468

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  +K AIG++    T+Q+DF LP RF+  Y+    EK  PV+IHR V  ++ERF+  
Sbjct: 469 KLDVQVKTAIGKEETLSTVQLDFLLPERFDLTYIGEDGEKHRPVVIHRGVVSTMERFVAY 528

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +IE +KG  P WL+P+Q  +  + + A ++YA+ + + L+   L +E D RNE + YKIR
Sbjct: 529 LIEEYKGAFPTWLAPVQMELIPVNADAHLDYAKGVQDKLQRAGLRVEVDDRNEKLGYKIR 588

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           E   KKIP  ++ GD+E    ++ +RR+GS  ++ + L
Sbjct: 589 EAQTKKIPYALVLGDQEMESGTVNVRRYGSKDSETMEL 626


>gi|91201672|emb|CAJ74732.1| strongly similar to threonyl-tRNA synthetase [Candidatus Kuenenia
           stuttgartiensis]
          Length = 640

 Score =  535 bits (1377), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 274/625 (43%), Positives = 398/625 (63%), Gaps = 20/625 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           +K+T PDG+ K+F  + T  +VA +I+  +   A+A   +G + DL+ P+++  S+ +IT
Sbjct: 2   VKVTLPDGTKKDFEDNITIGEVASNINSKMGGIALAARADGVLVDLNYPIKDDISLSVIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            E    L +IRHS AHIMA+AV  ++P V++ IGP IE+GFYYDFD    F++++L +IE
Sbjct: 62  EETQEGLEIIRHSTAHIMAQAVCRLFPGVKLGIGPTIENGFYYDFDCPNHFTTEDLKKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M +II  D  F +  +  E A +  E   + YKVE++  I   + V+ YRQ E+ DLC
Sbjct: 122 DEMLKIIKEDIRFERTDMPRELAVKEMEKSGQPYKVELIRDI-EDDTVSFYRQNEFIDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH++ TG+VK F KL+ VAGAYWRG     ML RIYGTA+ T ++L +YL  LEE+EK
Sbjct: 181 RGPHIQKTGRVKSF-KLLSVAGAYWRGKETNSMLQRIYGTAFFTNEDLKKYLKMLEEAEK 239

Query: 244 RDHRKLAREMDLFHIAEDG-SGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLD 301
           RDHRK+ +++DLF   EDG +G+ FWH KG ++   +  + R++  +  YE + +P +  
Sbjct: 240 RDHRKIGKDLDLFSFHEDGGAGLAFWHPKGARMRSIIEDFWRQEHFRRGYEILYSPHIAK 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
            +LW+ SGHWD YR +M++    D        + LKPMNCP  V ++   L SYR+LP+R
Sbjct: 300 INLWKTSGHWDFYRESMYSPIDVDG-----HEYILKPMNCPFAVLIYKTKLHSYRDLPLR 354

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
             E G+VYR E SG LHGL+RVRGFTQDDAH+FCT +Q+  E L++  L   +   FGF 
Sbjct: 355 WGELGTVYRYERSGVLHGLLRVRGFTQDDAHIFCTPDQLEQEILEVIKLAQFMLSSFGFN 414

Query: 422 KIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           +  ++LS R     EK +G D +WD AE+ +K  L+      +  ++   + GE  FYGP
Sbjct: 415 EYEIELSVRGKGEKEKYIGRDDVWDHAEDALKIALE------KTGLHYTRMEGEAKFYGP 468

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
             +  +KDAIGR WQ  TIQVDFNLP RF+  YV S       VMIHR V G++ERFIG 
Sbjct: 469 AIDIKVKDAIGRGWQGPTIQVDFNLPERFDVNYVGSDGYHHRVVMIHRTVMGAMERFIGC 528

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE+F G+ PLW++PIQ  + +IT + ++YA+++   L   +  +E D  N  I YKIRE
Sbjct: 529 LIEHFAGDFPLWIAPIQMRILSITDAQIDYAKKLQTELLLKNFRVECDIGNNKIGYKIRE 588

Query: 598 HSIKKIPIIIICGDKEASERSIGIR 622
            +++KIP ++I G+KE  E  + +R
Sbjct: 589 GTLQKIPYLLIVGNKEMEEGLVAVR 613


>gi|260682273|ref|YP_003213558.1| threonyl-tRNA synthetase [Clostridium difficile CD196]
 gi|260685872|ref|YP_003217005.1| threonyl-tRNA synthetase [Clostridium difficile R20291]
 gi|260208436|emb|CBA60998.1| threonyl-tRNA synthetase [Clostridium difficile CD196]
 gi|260211888|emb|CBE02332.1| threonyl-tRNA synthetase [Clostridium difficile R20291]
          Length = 670

 Score =  535 bits (1377), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 279/642 (43%), Positives = 405/642 (63%), Gaps = 16/642 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           IK+   DGSIK F    +  DVA+SIS  LA+  VA ++NG+V  L   +  +  + +  
Sbjct: 33  IKVALKDGSIKEFENAISVMDVAKSISEGLARNVVAASVNGEVVGLDHIIDTDCDLNLFK 92

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            ED     V RH+ AHI+A+A++ ++PE ++AIGP IE+GFYYD D +     ++L +IE
Sbjct: 93  FEDKEGKEVFRHTSAHILAQAIKRLYPEAKLAIGPSIENGFYYDIDLDHRLVPEDLEKIE 152

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M++I   D    +  L   +A EL + + E YKVE++  +P  E ++ Y+QG++ DLC
Sbjct: 153 AEMKKIAKEDLKIERFELPRNEALELMKEQGEDYKVELISDLPESEIISFYKQGDFTDLC 212

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ ST +VK   KL  VAGAYWRGD N  ML RIYGT++   ++L +YL+ LEE++K
Sbjct: 213 RGPHLPSTKKVKAV-KLQSVAGAYWRGDENNKMLQRIYGTSFEKNKDLEEYLHLLEEAKK 271

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           RDHRKL +E+ LF I E+G G   +  KG ++   L+ + R    K  Y EI +P +L++
Sbjct: 272 RDHRKLGKELGLFMIPEEGPGFPMFLPKGMELKNELLKFWREIHRKAGYIEIESPIILNR 331

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW  Y+ NM+ VK  D+       +A+KPMNCPG +  +N  L SYR+ P+R+
Sbjct: 332 KLWETSGHWYHYKENMYTVKIDDED------YAIKPMNCPGGLIYYNSQLHSYRDFPMRV 385

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AE G V+R+E SG+L GLMRVR FTQDD+H+F   EQ+ +E   + NLI  IYK FGFE 
Sbjct: 386 AELGRVHRHELSGALQGLMRVRAFTQDDSHIFMLPEQIKDEIKGVANLIDGIYKTFGFE- 444

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             ++LSTRPE  +GSD  W+ AEN ++  L+ +       +   +  G+GAFYGPK ++ 
Sbjct: 445 YNLELSTRPENSMGSDEEWEAAENGLREALEELG------LPYTINEGDGAFYGPKIDFH 498

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LKD +GR WQCGTIQ+D  LP +F+  Y+    EK  PVMIHR  FGSIERFIGI+IE++
Sbjct: 499 LKDCLGRTWQCGTIQLDMQLPRQFDNTYIGQDGEKHRPVMIHRVAFGSIERFIGILIEHY 558

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P+WLSP Q  +  I+   ++YA E+   L    + +E D R E I +KIRE  ++K
Sbjct: 559 AGKFPVWLSPTQVKILPISDKFMDYANEVKKELFDKGIRVELDDRAEKIGFKIREAQLEK 618

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P ++I G+KE ++ ++ +R         + L + I  ++KE
Sbjct: 619 VPYMLIVGEKEVADNNVSVRSRDKGEIGSIKLDEFIASISKE 660


>gi|225028654|ref|ZP_03717846.1| hypothetical protein EUBHAL_02933 [Eubacterium hallii DSM 3353]
 gi|224954040|gb|EEG35249.1| hypothetical protein EUBHAL_02933 [Eubacterium hallii DSM 3353]
          Length = 591

 Score =  535 bits (1377), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 257/550 (46%), Positives = 370/550 (67%), Gaps = 15/550 (2%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDS 134
           H+ AH++A+AV+ ++P+ + AIGP I++GFYYDFD   PF+ + LA IEK+M++I+ +  
Sbjct: 26  HTSAHVLAQAVKRLYPDTKCAIGPAIDNGFYYDFDFSFPFTEENLAAIEKEMKKIVKQSL 85

Query: 135 PFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQV 194
           P     ++ EKA +  + ++E YKVE++E +P  E +T Y+QG++ + C GPHV +T  +
Sbjct: 86  PLEVFEVTKEKALDYMKERQEDYKVEMIEELPEGETITFYKQGDYEEFCAGPHVSNTCVI 145

Query: 195 KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMD 254
           K   KL+  AGAYWRGD    ML+RIYG ++    EL  YL  LEE++KRDHRKL +E+ 
Sbjct: 146 KAI-KLLSTAGAYWRGDEKNKMLTRIYGISFPKAAELKDYLNMLEEAKKRDHRKLGKELG 204

Query: 255 LFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDS 313
           LF I E+G G  F+  KG  +  TLI Y R+   ++ YEEI+TP +L++ LW+ SGHWD 
Sbjct: 205 LFTIMEEGPGFPFFLPKGMILKNTLIDYWRKMHTREGYEEISTPILLNRQLWETSGHWDH 264

Query: 314 YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP 373
           YR NM+       T+ D   FA+KPMNCPG + V+    +SY+ELP+RL E G V+R+E 
Sbjct: 265 YRENMYT------TVIDDMDFAVKPMNCPGGMLVYKMEPRSYKELPLRLGELGLVHRHEK 318

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
           SG LHGLMRVR FTQDDAH+F T+ Q+ NE  K+  LI  +YK FGF    V+LSTRP  
Sbjct: 319 SGQLHGLMRVRCFTQDDAHIFMTEAQIENEIQKVVKLIDEVYKKFGF-TYHVELSTRPAD 377

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
            +G++  W+ A N ++  +  +       I   V  G+GAFYGPK ++ L+D+IGR WQC
Sbjct: 378 SMGTEEEWEVATNALENAIKAM------NIPYEVNEGDGAFYGPKLDFHLQDSIGRTWQC 431

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI 553
           GTIQ+DF LP RF A Y+ +  EK  P+MIHR VFGSIERFIGI+IE++ G  P WL+P+
Sbjct: 432 GTIQLDFQLPQRFEAEYIGADGEKHRPIMIHRVVFGSIERFIGILIEHYAGKFPTWLAPV 491

Query: 554 QAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
           QA V  ++    +YA+++A  LK+  + +E D R+E + YKIR+  ++K+P ++I G+KE
Sbjct: 492 QAKVLPVSDKFADYAKQVAEALKASGVRVEVDDRDEKLGYKIRQAQLQKVPYMLILGEKE 551

Query: 614 ASERSIGIRR 623
            S  ++ +R+
Sbjct: 552 QSAGTVSVRK 561


>gi|282855610|ref|ZP_06264924.1| threonine--tRNA ligase [Pyramidobacter piscolens W5455]
 gi|282586540|gb|EFB91794.1| threonine--tRNA ligase [Pyramidobacter piscolens W5455]
          Length = 640

 Score =  535 bits (1377), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 269/592 (45%), Positives = 387/592 (65%), Gaps = 18/592 (3%)

Query: 34  LAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEV 92
           L K AVA  ++G+  DL   +  +  ++ ITPE    + ++RHS AH++AEAV +++P  
Sbjct: 28  LDKGAVAAFVDGEEKDLDVVIDHDAEVKPITPETEEGIEIVRHSTAHLLAEAVMNLYPAA 87

Query: 93  QVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFES 152
           +VAIGP I+DGFYYD +  +  S + L  +EK+M+ I  R  P  ++ +    A +LF  
Sbjct: 88  KVAIGPTIKDGFYYDIEFPETVSEEILPALEKEMRRIAKRSIPLRRERVGVADAIKLFRE 147

Query: 153 KKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDS 212
           + + YKVEILE +   E V LY Q ++ DLCRGPHV +T +  K FKL+ +AGAYWRGD 
Sbjct: 148 RNDPYKVEILEGV-GDETVNLYWQDDYVDLCRGPHVPNT-RFLKHFKLLSMAGAYWRGDE 205

Query: 213 NRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKG 272
           +  ML+RIYGTA+NTQ+EL  Y+  +EE+ +RDHRKL +E+DLF +  +G G  F+H KG
Sbjct: 206 HNIMLTRIYGTAFNTQEELDAYITRMEEARRRDHRKLGKELDLFSLHNEGVGFPFFHPKG 265

Query: 273 WKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
             +   L+S+ RR    + Y E  TPQ+L++ LW +SGHWD YR NM+       TI D+
Sbjct: 266 MVVMNKLMSFWRRLHFLNGYTEARTPQILNRDLWLRSGHWDHYRENMYFT-----TIDDI 320

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
              A+KPMNCPG + ++     SYRELP+R+ E G V+R+E SG+LHGLMRVR FTQDDA
Sbjct: 321 -PHAIKPMNCPGGIIIYKTSKHSYRELPIRMGELGVVHRHELSGALHGLMRVRCFTQDDA 379

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKD-FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKG 450
           H FCT EQ+ +E   I  L   +Y   FGF K  V+LSTRPE  +GSD LW+ AEN +  
Sbjct: 380 HHFCTPEQIKDEVKLIMKLNDYVYTHVFGF-KYHVELSTRPENSMGSDELWEIAENALSE 438

Query: 451 VLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFY 510
            L   +  +   +N G    +GAFYGPK ++ L+D IGR WQCGTIQ+DF +P +F+  Y
Sbjct: 439 TL--AETGTPYVLNPG----DGAFYGPKIDFHLEDCIGRTWQCGTIQLDFTMPEKFDMTY 492

Query: 511 VNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQE 570
           V +   +  PVM+HR + GSIERF+GI+IEN+ G  P WL+P+Q  +  ++   + YA+E
Sbjct: 493 VGADGREHRPVMLHRTILGSIERFMGILIENYAGAFPYWLAPVQVKLLAVSDDHLPYARE 552

Query: 571 IANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           +A  L++ ++ +E D R+E +  KIR+  ++K+P +++ GDKE   R++ +R
Sbjct: 553 VAEKLQNLNVRVEIDRRDEKLGRKIRDAQMEKVPYMLVIGDKEVEARTVAVR 604


>gi|297588366|ref|ZP_06947009.1| threonine--tRNA ligase [Finegoldia magna ATCC 53516]
 gi|297573739|gb|EFH92460.1| threonine--tRNA ligase [Finegoldia magna ATCC 53516]
          Length = 634

 Score =  534 bits (1376), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 264/620 (42%), Positives = 388/620 (62%), Gaps = 16/620 (2%)

Query: 6   KLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITP 64
           ++   DGS+K F    +  DV +SIS  LA+  V   ++GK+  L + ++ +  ++ +  
Sbjct: 3   EVKLKDGSVKEFDEEISLLDVCKSISEGLARDCVGAVVDGKIMGLMETIKSDCEVQFVKF 62

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           +D     V  H+ +H+MA A+Q ++P  + AIGP I+ GFYYD D +  F  ++L +IE 
Sbjct: 63  DDEEGKQVFWHTSSHLMAYAIQRLYPNTKFAIGPSIDSGFYYDLDTDHKFVPEDLEKIEA 122

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
           +M++I+  +   ++  +S E+A E F+ + + YKV+++E++     +TLY  G++ DLCR
Sbjct: 123 EMKKIVKENPKLVRVEISREEALERFKKEGQDYKVDLIENLDEDATITLYEMGDFVDLCR 182

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPH+     +K F KL+ +AGAYWRGD N  ML RIYG ++  ++ L +YL  +EE++KR
Sbjct: 183 GPHLLEVKNIKAF-KLLSIAGAYWRGDENNKMLQRIYGISFPKKKLLDEYLERMEEAKKR 241

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +EM LF I E+G G  F+H  G  +   L  +++ ++ D  Y +I TP +L++ 
Sbjct: 242 DHRKIGKEMGLFSIQEEGPGFPFFHPNGMVVLNELEKFLKEQLLDRGYGQIKTPLILNED 301

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW QSGHWD Y+ NM+  +   D       +A+KPMNCPG + V+   L SYRELP+++A
Sbjct: 302 LWHQSGHWDHYKENMYFTQIDGDD------YAIKPMNCPGSILVYKDELHSYRELPIKVA 355

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           E G V+R+E SG+LHGL RVR F QDDAHVFC  EQ+  E  KI +    IY  FGF K 
Sbjct: 356 ELGQVHRHELSGALHGLFRVRTFVQDDAHVFCLPEQIEEEVTKIIDFCDYIYSKFGF-KY 414

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            V+LSTRPE  +GSD  WD A N +K  L+      + +IN G    +GAFYGPK ++ L
Sbjct: 415 EVELSTRPEDSMGSDEDWDLAINSLKSALE--HKGLEYKINEG----DGAFYGPKIDFHL 468

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +DAIGR WQCGTIQ+DF +P RF+  Y+ S   K  P MIHRA+ GS ERF+GI+IE++ 
Sbjct: 469 EDAIGRTWQCGTIQLDFQMPERFDMTYIASDGSKKRPAMIHRAILGSEERFMGILIEHYA 528

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  PLWLSPIQ  +  I+    +YA E+   +K+  L ++ D R+E I  KIRE  +KK+
Sbjct: 529 GKFPLWLSPIQVEILPISDKFNDYAYELQQKMKARGLRVKVDDRSEKIGLKIRESQLKKV 588

Query: 604 PIIIICGDKEASERSIGIRR 623
              +I G  E     + +R+
Sbjct: 589 NYSLIIGQNEIDNNEVSVRK 608


>gi|294101704|ref|YP_003553562.1| threonyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
 gi|293616684|gb|ADE56838.1| threonyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
          Length = 633

 Score =  534 bits (1376), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 274/617 (44%), Positives = 393/617 (63%), Gaps = 18/617 (2%)

Query: 34  LAKKAVAVAINGKVCDLSDPVRE-GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEV 92
           + K AVA  ING+  DLS  + E G +E I       L +IRHS AH+MA+A QS++PE 
Sbjct: 28  MHKGAVAAKINGRYVDLSAEIAESGLLEAIDGASEEGLDIIRHSAAHLMAQAFQSLYPEA 87

Query: 93  QVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFES 152
              IGP I++GFYYD +  +  S + L +IEK+M+ +  R  P  +Q L  E+A   F+ 
Sbjct: 88  HFGIGPSIKNGFYYDMELPESISEEALPKIEKEMKRLAKRAFPIERQILKKEEAIAFFKE 147

Query: 153 KKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDS 212
           + E YKVE++E I     V+LYRQG++ DLCRGPHV +T  +K F KL+ VAGAYWRGD 
Sbjct: 148 RGEKYKVELIEEI-EDGTVSLYRQGDYVDLCRGPHVPNTSWIKHF-KLLSVAGAYWRGDE 205

Query: 213 NRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKG 272
              ML+R+YGTA+  ++ L  Y+  LEE++ RDHRK+ +E+DLF I  +G G  F+H KG
Sbjct: 206 KNIMLTRVYGTAFADEESLQTYITRLEEAKNRDHRKIGKELDLFSIQPEGPGFPFFHPKG 265

Query: 273 WKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
             I   L  + R+   K+ Y EI TP +LD+ LW +SGHWD YR NM+  +       D 
Sbjct: 266 MAILNKLTEFWRQVHEKNGYCEIRTPLILDRSLWIRSGHWDHYRDNMYFTEI------DE 319

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
             FA+KPMNCPG + ++   ++SYR+LP+R+AE G V+R+E SG LHGLMRVR FTQDDA
Sbjct: 320 MPFAIKPMNCPGGILIYKSQIRSYRDLPLRMAELGIVHRHERSGVLHGLMRVRCFTQDDA 379

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKD-FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKG 450
           H++CT EQ+ +E   I  L   IY+D FGF K  ++LSTRPE  +GS+  W+ AE  +K 
Sbjct: 380 HLYCTPEQVKDEIKGIMYLCQYIYRDIFGF-KYTMELSTRPENSMGSEEQWNIAETALKE 438

Query: 451 VLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFY 510
            L+  + + Q R+N G    +GAFYGPK ++ L+D IGR WQCGTIQ+DF +P +F+  +
Sbjct: 439 ALE--ETNMQYRVNPG----DGAFYGPKIDFHLEDCIGRTWQCGTIQLDFQMPEKFDLTF 492

Query: 511 VNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQE 570
           V +  ++  PVM+HR + GS+ERF GI+IE F G  P WL+P+Q  +  I+   ++YA+ 
Sbjct: 493 VGADGKEHRPVMLHRTILGSLERFFGILIEQFAGAFPYWLAPVQVRLLPISEDFLDYARL 552

Query: 571 IANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
           +   L ++++ +E D R+E +  KIR+  I+KIP + + G+KE +   +  R        
Sbjct: 553 VQAKLVANNIRVEIDSRDEKLGKKIRDAQIQKIPYMAVIGEKEVASDQVAPRERSRGDLG 612

Query: 631 KVSLLDAIPILTKESLP 647
            +S+   I +L +E  P
Sbjct: 613 AMSINSFIDVLMEEKNP 629


>gi|298530062|ref|ZP_07017464.1| threonyl-tRNA synthetase [Desulfonatronospira thiodismutans ASO3-1]
 gi|298509436|gb|EFI33340.1| threonyl-tRNA synthetase [Desulfonatronospira thiodismutans ASO3-1]
          Length = 646

 Score =  534 bits (1376), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 273/622 (43%), Positives = 398/622 (63%), Gaps = 23/622 (3%)

Query: 21  ATGSDVAESISRSLA----KKAVAVAINGKVCDLSDPVRE--GSIEIITPEDPRSLAVIR 74
           +TG+   E +S++L+    K+AVA     ++ DL   V E  G +E ++   P  L V+R
Sbjct: 14  STGATCREILSKALSGKKFKEAVACRCEDRLYDLGSEVDEQCGVLEPVSLSSPEGLKVLR 73

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDS 134
           HS AHIMAEAV++I+P  +V IGP IE GFYYDFD E+PF+ ++L +IE +M   IA+D 
Sbjct: 74  HSAAHIMAEAVKTIFPSARVTIGPDIEHGFYYDFDYERPFTPEDLEKIEAEMARSIAQDQ 133

Query: 135 PFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQV 194
           PF +  +S E+A+++F    E YK+EIL+ +  ++ V+LYR G++ DLCRGPHV STG V
Sbjct: 134 PFERVVMSREEAKKVFLDMNETYKLEILDEL-EEDEVSLYRHGDFIDLCRGPHVPSTGYV 192

Query: 195 KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMD 254
           K F KL  VAGAYWRGD  RPML RIYGTA+ + +EL ++L  LEE+ KRDHRKL  ++D
Sbjct: 193 KSF-KLTSVAGAYWRGDEKRPMLQRIYGTAFASDKELKKHLTRLEEARKRDHRKLGAQLD 251

Query: 255 LFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWD 312
           LF  +E+ G G+  +H KG  I   L  + R++ ++  Y+ +  PQ+L + LW++SGH+D
Sbjct: 252 LFSFSEEAGPGMPIFHPKGALIRTILEDFERKEHLRRGYQIVQGPQILRRELWEKSGHYD 311

Query: 313 SYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE 372
           +YR NM+       T  D + + +KPMNC  H+ ++   L+SYR+LP+R  E G V+R+E
Sbjct: 312 NYRENMYF------THIDEQVYGVKPMNCLSHMLIYKSKLRSYRDLPLRYFELGRVHRHE 365

Query: 373 PSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
            SG LHGL+RVR FTQDDAH+ C  +Q+ +E   + N +  +   FGFE + V++STRPE
Sbjct: 366 KSGVLHGLLRVREFTQDDAHILCRPDQLQDEITGVVNFVRDVMGLFGFEYV-VEVSTRPE 424

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
           K +GS   W+ +   +   LD +    +  IN G    +GAFYGPK +  LKDA+ R WQ
Sbjct: 425 KHIGSSEAWEKSTRALTSALDALDMPYE--INPG----DGAFYGPKIDIKLKDALDRKWQ 478

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
           C T+Q DF LP RF+  Y      K  PVM+HR V G+IERF+G++IE++ G  P WL+P
Sbjct: 479 CATVQCDFTLPERFDLTYTGEDGRKYRPVMLHRVVLGAIERFLGVLIEHYGGAFPTWLAP 538

Query: 553 IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
           +QA +  IT +   Y  + A+  +   + +E D RNE + YK+RE  ++KIP +++ GD+
Sbjct: 539 VQARIMNITDAQAGYVHDCADRFRQMGIRVEVDDRNEKLGYKVREAQMEKIPYVLVAGDQ 598

Query: 613 EASERSIGIRRFGSTTTQKVSL 634
           E  E  + +R  G      +S+
Sbjct: 599 EVQESGLNVRLRGGKNLGLMSI 620


>gi|229543582|ref|ZP_04432642.1| threonyl-tRNA synthetase [Bacillus coagulans 36D1]
 gi|229328002|gb|EEN93677.1| threonyl-tRNA synthetase [Bacillus coagulans 36D1]
          Length = 640

 Score =  534 bits (1376), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 266/642 (41%), Positives = 416/642 (64%), Gaps = 23/642 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSI 59
           M   +K+TFPDG++K FP   T  ++A+SIS  L KKA+A  +NGK+ DL  P+ E G+I
Sbjct: 1   MAEIVKITFPDGALKEFPFGTTTEEIAQSISPGLRKKALAGKLNGKLLDLRTPIEEDGAI 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EI+TPE   +L ++RHS AH+MA+AV+ ++  V+  +GP IE+GFYYD D E   + ++L
Sbjct: 61  EIVTPEHEDALGILRHSTAHLMAQAVRRLYGNVKFGVGPAIENGFYYDMDLEVSLTPEDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IEK+M++I+A +   +++ +S ++AR++F    + YK+E++++IP  E VT+Y QGE+
Sbjct: 121 PKIEKEMKKIVAENLEIVRKVVSRDEARKMF--AHDEYKLELIDAIP-DETVTVYEQGEF 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRG HV STG++K+F KL+ +AGAYWRGDSN  M+ RIYGTA+  +++L  +L FLE
Sbjct: 178 VDLCRGVHVPSTGKIKEF-KLLNIAGAYWRGDSNNKMMQRIYGTAFFKKEDLEAHLKFLE 236

Query: 240 ESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTP 297
           E+++RDHRK+ +E++LF  ++  G G+  W  KG  I +T+  Y+  +++K  Y+ + TP
Sbjct: 237 EAKERDHRKIGKELELFTNSQKVGQGLPLWLPKGATIRRTIERYIVDKEVKLGYDHVYTP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    L++ SGHWD Y+ +MF V   D+         L+PMNCP H+ V+ + + SYRE
Sbjct: 297 VLGSVDLYKTSGHWDHYQEDMFPVMKMDN-----EELVLRPMNCPHHMMVYKNTIHSYRE 351

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AE G ++R E SG+L GL RVRG T +DAH+F   +Q+  E  ++  LI+ +YKD
Sbjct: 352 LPIRIAELGLMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEEFKRVVELILEVYKD 411

Query: 418 FGFEKIMVKLSTR-PE---KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           F       +LS R PE   K    D +W+ A+ ++K  +D       +        GE A
Sbjct: 412 FNITDYSFRLSYRDPENTDKYYDDDEMWNKAQAMLKETMDDFGFDYYE------AEGEAA 465

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  ++ A+G+D    T+Q+DF LP RF+  YV    +   PV+IHR V  ++ER
Sbjct: 466 FYGPKLDVQVRTALGKDETLSTVQLDFLLPERFDLTYVGEDGKPHRPVVIHRGVVSTMER 525

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETIN 592
           F+  +IE +KG  P WL+PIQ  V  ++  A  +YA+++   LK+  +  E D R+E + 
Sbjct: 526 FVAYLIEEYKGAFPTWLAPIQVQVIPVSPDAHYDYARKVQEALKAEGVRAELDARDEKLG 585

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           Y+IRE  ++KIP  +I GD+EA++ ++ +R++G   T+ V +
Sbjct: 586 YRIREAQVQKIPYALIVGDQEATDNAVNVRKYGEKQTETVPV 627


>gi|126698152|ref|YP_001087049.1| threonyl-tRNA synthetase [Clostridium difficile 630]
 gi|254974173|ref|ZP_05270645.1| threonyl-tRNA synthetase [Clostridium difficile QCD-66c26]
 gi|255091574|ref|ZP_05321052.1| threonyl-tRNA synthetase [Clostridium difficile CIP 107932]
 gi|255099679|ref|ZP_05328656.1| threonyl-tRNA synthetase [Clostridium difficile QCD-63q42]
 gi|255313300|ref|ZP_05354883.1| threonyl-tRNA synthetase [Clostridium difficile QCD-76w55]
 gi|255515991|ref|ZP_05383667.1| threonyl-tRNA synthetase [Clostridium difficile QCD-97b34]
 gi|255649082|ref|ZP_05395984.1| threonyl-tRNA synthetase [Clostridium difficile QCD-37x79]
 gi|306519197|ref|ZP_07405544.1| threonyl-tRNA synthetase [Clostridium difficile QCD-32g58]
 gi|123066930|sp|Q189B8|SYT_CLOD6 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|115249589|emb|CAJ67406.1| Threonyl-tRNA synthetase [Clostridium difficile]
          Length = 639

 Score =  534 bits (1376), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 279/642 (43%), Positives = 405/642 (63%), Gaps = 16/642 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           IK+   DGSIK F    +  DVA+SIS  LA+  VA ++NG+V  L   +  +  + +  
Sbjct: 2   IKVALKDGSIKEFENAISVMDVAKSISEGLARNVVAASVNGEVVGLDHIIDTDCDLNLFK 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            ED     V RH+ AHI+A+A++ ++PE ++AIGP IE+GFYYD D +     ++L +IE
Sbjct: 62  FEDKEGKEVFRHTSAHILAQAIKRLYPEAKLAIGPSIENGFYYDIDLDHRLVPEDLEKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M++I   D    +  L   +A EL + + E YKVE++  +P  E ++ Y+QG++ DLC
Sbjct: 122 AEMKKIAKEDLKIERFELPRNEALELMKEQGEDYKVELISDLPESEIISFYKQGDFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ ST +VK   KL  VAGAYWRGD N  ML RIYGT++   ++L +YL+ LEE++K
Sbjct: 182 RGPHLPSTKKVKAV-KLQSVAGAYWRGDENNKMLQRIYGTSFEKNKDLEEYLHLLEEAKK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           RDHRKL +E+ LF I E+G G   +  KG ++   L+ + R    K  Y EI +P +L++
Sbjct: 241 RDHRKLGKELGLFMIPEEGPGFPMFLPKGMELKNELLKFWREIHRKAGYIEIESPIILNR 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW  Y+ NM+ VK  D+       +A+KPMNCPG +  +N  L SYR+ P+R+
Sbjct: 301 KLWETSGHWYHYKENMYTVKIDDED------YAIKPMNCPGGLIYYNSQLHSYRDFPMRV 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AE G V+R+E SG+L GLMRVR FTQDD+H+F   EQ+ +E   + NLI  IYK FGFE 
Sbjct: 355 AELGRVHRHELSGALQGLMRVRAFTQDDSHIFMLPEQIKDEIKGVANLIDGIYKTFGFE- 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             ++LSTRPE  +GSD  W+ AEN ++  L+ +       +   +  G+GAFYGPK ++ 
Sbjct: 414 YNLELSTRPENSMGSDEEWEAAENGLREALEELG------LPYTINEGDGAFYGPKIDFH 467

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LKD +GR WQCGTIQ+D  LP +F+  Y+    EK  PVMIHR  FGSIERFIGI+IE++
Sbjct: 468 LKDCLGRTWQCGTIQLDMQLPRQFDNTYIGQDGEKHRPVMIHRVAFGSIERFIGILIEHY 527

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P+WLSP Q  +  I+   ++YA E+   L    + +E D R E I +KIRE  ++K
Sbjct: 528 AGKFPVWLSPTQVKILPISDKFMDYANEVKKELFDKGIRVELDDRAEKIGFKIREAQLEK 587

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P ++I G+KE ++ ++ +R         + L + I  ++KE
Sbjct: 588 VPYMLIVGEKEVADNNVSVRSRDKGEIGSIKLDEFIASISKE 629


>gi|47096724|ref|ZP_00234309.1| threonyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
 gi|254898274|ref|ZP_05258198.1| threonyl-tRNA synthetase [Listeria monocytogenes J0161]
 gi|254912233|ref|ZP_05262245.1| threonyl-tRNA synthetase [Listeria monocytogenes J2818]
 gi|254936561|ref|ZP_05268258.1| threonyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|47014908|gb|EAL05856.1| threonyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
 gi|258609155|gb|EEW21763.1| threonyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|293590208|gb|EFF98542.1| threonyl-tRNA synthetase [Listeria monocytogenes J2818]
          Length = 640

 Score =  534 bits (1376), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 265/638 (41%), Positives = 408/638 (63%), Gaps = 20/638 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           +K+TFPDG++K F    + +D+A SIS  L KKA+A  +NG++ DL  P+ E G+IEI+T
Sbjct: 1   MKITFPDGAVKEFEPGVSTADIAASISPGLKKKALAGKLNGELLDLVTPIHEDGAIEIVT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+   +L ++RHS AH+MA+A++ ++P+V+  +GP IE GFYYD D E   S + L +IE
Sbjct: 61  PDHEDALGILRHSTAHLMAQALKRLYPDVKFGVGPAIESGFYYDIDTEAVISDESLVEIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+MQ+I+  + P  ++ +S E+A + F+   + YK+E++E+IP  E VT+Y QGE+FDLC
Sbjct: 121 KEMQKIVRENVPIEREVVSREEAIKRFKVIGDQYKLELIEAIPEDETVTIYTQGEFFDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RG HV STG++ + FKL+ VAGAYWRGDSN  ML RIYGTA+  +  L +++   +E+++
Sbjct: 181 RGVHVPSTGKI-QVFKLLSVAGAYWRGDSNNKMLQRIYGTAFFDKNGLKEFIQMQKEAKE 239

Query: 244 RDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLD 301
           RDHRKL +E++LF +  E G G+  W  KG  I + +  Y+  ++ +  Y  + TP + +
Sbjct: 240 RDHRKLGKELELFTNSIEVGQGLPLWLPKGATIRRVIERYIVDKEERLGYNHVYTPIMAN 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             L++ SGHWD Y  +MF     D+         L+PMNCP H+ ++ + + SYRELP+R
Sbjct: 300 VELYKTSGHWDHYHEDMFPTMKMDN-----EELVLRPMNCPHHMMIYKNDIHSYRELPIR 354

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AE G ++R E SG+L GL RVRG T +DAHVF   +Q+ +E  ++  LI+ +YKDF  +
Sbjct: 355 IAELGMMHRYEMSGALSGLQRVRGMTLNDAHVFVRPDQIKDEFKRVVELILEVYKDFDIK 414

Query: 422 KIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
               +LS R     EK    DA+W+ A+ ++K  +D ++      ++     GE AFYGP
Sbjct: 415 DYSFRLSYRDPKNTEKYFDDDAMWEKAQAMLKSAMDEME------MDYFEAEGEAAFYGP 468

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  +K AIG++    T+Q+DF LP RF+  Y+    EK  PV+IHR V  ++ERF+  
Sbjct: 469 KLDVQVKTAIGKEETLSTVQLDFLLPERFDLSYIGEDGEKHRPVVIHRGVVSTMERFVAY 528

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +IE +KG  P WL+P+Q  +  + + A ++YA+ + + L+   L  E D RNE + YKIR
Sbjct: 529 LIEEYKGAFPTWLAPVQMELIPVNADAHLDYAKGVQDKLQRAGLRAEVDDRNEKLGYKIR 588

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           E   KKIP  ++ GD+E    S+ +RR+GS  ++ + L
Sbjct: 589 EAQTKKIPYALVLGDQEVEAGSVNVRRYGSKDSETMDL 626


>gi|206889512|ref|YP_002249047.1| threonyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM
           11347]
 gi|206741450|gb|ACI20507.1| threonyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM
           11347]
          Length = 617

 Score =  534 bits (1375), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 271/592 (45%), Positives = 387/592 (65%), Gaps = 18/592 (3%)

Query: 37  KAVAVAINGKVCDLS---DPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQ 93
           +A+A+ IN ++ DLS       +  IEIITP+    L ++RHS AHIMA AV+ ++P+V+
Sbjct: 13  QAIALKINREIKDLSFISSLNEDEEIEIITPQSKEGLEILRHSVAHIMAHAVKDLFPDVK 72

Query: 94  VAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESK 153
           V IGP IEDGFYYDFD++ PF+ ++L +IEK+M EII    PF+++ +S ++A +LFES 
Sbjct: 73  VTIGPAIEDGFYYDFDRDTPFTEEDLQKIEKRMHEIIKSRQPFIRKEISKDEAIKLFESL 132

Query: 154 KEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSN 213
            E+YK+EI+  I   E V++Y +G + DLCRGPH+  TG VK F KL+ VAGAYWRGD  
Sbjct: 133 GESYKIEIINEI-EDEKVSIYEEGGFIDLCRGPHIPHTGIVKAF-KLLSVAGAYWRGDER 190

Query: 214 RPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKG 272
             ML RIYGTA+ T++EL  YL FLEE +KRDHR+L +++ LF I+E+ G G+I W   G
Sbjct: 191 NKMLQRIYGTAFPTKEELQDYLNFLEEVKKRDHRRLGKQLRLFEISEEVGPGLIIWLPNG 250

Query: 273 WKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
             + + +  + + + +K  Y+ + TP +    LW++SGH D YR NM++    D+     
Sbjct: 251 AIVRKIIEDFWKDEHLKAGYQLLYTPHIARLDLWRKSGHLDFYRENMYSPMEIDEI---- 306

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
             + LKPMNCP H+ V+   L+SYRELP+R AE G+VYR E SG LHGL+RVRGFTQDDA
Sbjct: 307 -AYQLKPMNCPFHIQVYKSELRSYRELPLRFAELGTVYRYERSGVLHGLLRVRGFTQDDA 365

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
           H+FCT+EQ+  E  K+ +  + I   FGF    + +STRPEK VGS   W+ A   ++  
Sbjct: 366 HIFCTEEQLEEEIQKVLDFTVFILSTFGFTAYDIYISTRPEKYVGSIENWEKATFALEEA 425

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
           L T     Q      +  GEG FYGPK +  +KD + R WQC TIQVDFN+P RF+  Y 
Sbjct: 426 LKTRNLPYQ------IDPGEGVFYGPKIDIKIKDVLNRSWQCSTIQVDFNIPERFDITYR 479

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
               ++  P+MIHRA+ GS+ERF+G++IE++ G  PLWL+P+Q  V +I+    +YA  +
Sbjct: 480 GKDGKEHRPIMIHRALMGSLERFMGVLIEHYAGAFPLWLAPVQIEVMSISEKHADYAARV 539

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRR 623
              L ++   ++ +  NE I YKIR  ++ K+P ++I GDKE    +I +R+
Sbjct: 540 YRQLINNDFRVKLNIDNEKIGYKIRNATLNKVPYMVIIGDKEIENNAITVRK 591


>gi|300814791|ref|ZP_07095034.1| threonine--tRNA ligase [Peptoniphilus sp. oral taxon 836 str.
           F0141]
 gi|300511099|gb|EFK38356.1| threonine--tRNA ligase [Peptoniphilus sp. oral taxon 836 str.
           F0141]
          Length = 636

 Score =  534 bits (1375), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 270/640 (42%), Positives = 399/640 (62%), Gaps = 16/640 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPE 65
           +T PDG  K F    +  +V +SIS  L + +V   +N KV   +D + E S  +++  +
Sbjct: 3   ITLPDGEKKEFEKGISVGEVTKSISEGLYRDSVGAKVNDKVLGNADKINEDSTFKVLKLD 62

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D     ++ HS +H+MA A+++++P  + AIGP I+ GFYYD D +  F  ++   IEKK
Sbjct: 63  DLEGQKILWHSASHLMAYAIETLYPNTKFAIGPAIDSGFYYDMDLDHRFVEEDFQAIEKK 122

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M E+   D   ++  ++ + A + F+ K + YKVE++E +   E +TLY+ GE+ DLCRG
Sbjct: 123 MIELAREDLKIVRVDITRDAAIKYFKEKGQDYKVELIEDLAEDEPITLYQMGEFTDLCRG 182

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PH+ ST ++K   KL+  AGAYWRGDSN  ML RIYG A++ +++L +Y+   EE+EKRD
Sbjct: 183 PHLESTKKIKAV-KLLSTAGAYWRGDSNNKMLQRIYGIAFDKKKKLDEYIEKREEAEKRD 241

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHL 304
           HRKL RE+DLF + E+G G  F+H  G  I   L+S+ +  +++  Y EI TP +L++ L
Sbjct: 242 HRKLGRELDLFSMHEEGPGFPFFHPNGMIIRNNLLSWWKNVLQERGYGEILTPVILNEDL 301

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W +SGHWD Y+ NM+  +       D   +A+KPMNCPG   +++    SYR+LP+R AE
Sbjct: 302 WHRSGHWDHYKENMYFTEI------DEEGYAVKPMNCPGSTLIYSTTPHSYRDLPLRYAE 355

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FG V+R+E SG+LHGL RVR FTQDDAH++C   Q+ +E  +I +L   +Y  FGF K  
Sbjct: 356 FGLVHRHELSGALHGLFRVRSFTQDDAHIYCLPNQIKSEVFEIIDLANLLYDTFGF-KYS 414

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           V+LSTRP+  +G    W++AE  +K  L+  +      IN G    +GAFYGPK +Y L+
Sbjct: 415 VELSTRPDDYMGDLESWNEAEKALKEALE--EKGMPYTINEG----DGAFYGPKIDYHLE 468

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           DAIGR WQCGTIQ+DF LP  F   YV     K  PVM+HRA+FGS+ERF+GI+IE+F G
Sbjct: 469 DAIGRTWQCGTIQLDFQLPQNFELTYVAEDGSKKRPVMLHRALFGSVERFMGILIEHFAG 528

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             PLWLSP+Q  +  ++     YA E+ + LK   + ++ D R E + YKIRE  +KK+ 
Sbjct: 529 KFPLWLSPVQVEIIPVSEKFKPYAGEVFDQLKKAGIRVKIDERAEKVGYKIREAQLKKVN 588

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            +++ G+KE +   + +R+      + V +   I  L +E
Sbjct: 589 YMLVIGEKETASHKLSVRKRSGEEVKDVEVSKFIEDLKEE 628


>gi|255305562|ref|ZP_05349734.1| threonyl-tRNA synthetase [Clostridium difficile ATCC 43255]
          Length = 639

 Score =  534 bits (1375), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 279/642 (43%), Positives = 404/642 (62%), Gaps = 16/642 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           IK+   DGSIK F    +  DVA+SIS  LA+  VA ++NG+V  L   +  +  + +  
Sbjct: 2   IKVALKDGSIKEFENAISVMDVAKSISEGLARNVVAASVNGEVVGLDHIIDTDCDLNLFK 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            ED     V RH+ AHI+A+A++ ++PE ++AIGP IE+GFYYD D +     ++L +IE
Sbjct: 62  FEDKEGKEVFRHTSAHILAQAIKRLYPEAKLAIGPSIENGFYYDIDLDHRLVPEDLEKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M++I   D    +  L   +A EL   + E YKVE++  +P  E ++ Y+QG++ DLC
Sbjct: 122 AEMKKIAKEDLKIERFELPRNEALELMREQGEDYKVELISDLPESEIISFYKQGDFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ ST +VK   KL  VAGAYWRGD N  ML RIYGT++   ++L +YL+ LEE++K
Sbjct: 182 RGPHLPSTKKVKAV-KLQSVAGAYWRGDENNKMLQRIYGTSFEKNKDLEEYLHLLEEAKK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           RDHRKL +E+ LF I E+G G   +  KG ++   L+ + R    K  Y EI +P +L++
Sbjct: 241 RDHRKLGKELGLFMIPEEGPGFPMFLPKGMELKNELLKFWREIHRKAGYIEIESPIILNR 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW  Y+ NM+ VK  D+       +A+KPMNCPG +  +N  L SYR+ P+R+
Sbjct: 301 KLWETSGHWYHYKENMYTVKIDDED------YAIKPMNCPGGLIYYNSQLHSYRDFPMRV 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AE G V+R+E SG+L GLMRVR FTQDD+H+F   EQ+ +E   + NLI  IYK FGFE 
Sbjct: 355 AELGRVHRHELSGALQGLMRVRAFTQDDSHIFMLPEQIKDEIKGVANLIDGIYKTFGFE- 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             ++LSTRPE  +GSD  W+ AEN ++  L+ +       +   +  G+GAFYGPK ++ 
Sbjct: 414 YNLELSTRPENSMGSDEEWEAAENGLREALEELG------LPYTINEGDGAFYGPKIDFH 467

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LKD +GR WQCGTIQ+D  LP +F+  Y+    EK  PVMIHR  FGSIERFIGI+IE++
Sbjct: 468 LKDCLGRTWQCGTIQLDMQLPRQFDNTYIGQDGEKHRPVMIHRVAFGSIERFIGILIEHY 527

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P+WLSP Q  +  I+   ++YA E+   L    + +E D R E I +KIRE  ++K
Sbjct: 528 AGKFPVWLSPTQVKILPISDKFMDYANEVKKELFDKGIRVELDDRAEKIGFKIREAQLEK 587

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P ++I G+KE ++ ++ +R         + L + I  ++KE
Sbjct: 588 VPYMLIVGEKEVADNNVSVRSRDKGEIGSIKLDEFIASISKE 629


>gi|24379968|ref|NP_721923.1| threonyl-tRNA synthetase [Streptococcus mutans UA159]
 gi|73919830|sp|Q8DT12|SYT_STRMU RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|24377953|gb|AAN59229.1|AE014990_3 putative threonyl-tRNA synthetase [Streptococcus mutans UA159]
          Length = 649

 Score =  534 bits (1375), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 266/640 (41%), Positives = 408/640 (63%), Gaps = 23/640 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           IK+TFPDG+++ F +  T S++AESIS+SLAKKA+A   NG++ D +  + ++GSIEI+T
Sbjct: 2   IKITFPDGAVREFEIGTTTSEIAESISKSLAKKALAGKFNGQLIDTTRAITQDGSIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQI 122
           P+   +L ++RHS AH+ A+A + ++P++ + +GP I+DGFYYD D E    S+++L +I
Sbjct: 62  PDHEDALDILRHSAAHLFAQAARRLFPDIHLGVGPAIQDGFYYDTDNEAGQISNEDLPRI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWFD 181
           E++M++I+  + P +++ ++ ++ARE+F  K + YK+E++E        +T+YRQGE+ D
Sbjct: 122 EEEMKKIVKENFPSVREEVTKDEAREIF--KNDPYKLELIEEHSEDAGGLTIYRQGEYVD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++  F L+ VAGAYWRGDSN  M+ RIYGTAW  +++L  YL  LEE+
Sbjct: 180 LCRGPHVPSTGRIQ-VFHLLNVAGAYWRGDSNNAMMQRIYGTAWFDKKDLKSYLKRLEEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+++ G G+ FW   G  I + +  Y+  K +   Y+ + TP +
Sbjct: 239 KERDHRKLGKELDLFMISQEVGQGLPFWLPDGATIRRIIERYITDKEVASGYQHVYTPPI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHWD YR +MF        + D  +F L+PMNCP H+ V+ + + SYRELP
Sbjct: 299 ASVDLYKTSGHWDHYREDMFPTM----DMGDGESFVLRPMNCPHHIEVYKNHVHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  +   LII +Y+DF 
Sbjct: 355 IRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQVEDEFKRTLQLIIDVYEDFN 414

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R      K    D +W+ ++ ++K  +D +       ++     GE AFY
Sbjct: 415 LTDYSFRLSYRDPNDTHKYFDDDEMWEKSQTMLKAAMDDMG------LDYYEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G D    TIQ+DF LP RF   Y+ +  E+  PVMIHR +  ++ERF 
Sbjct: 469 GPKLDIQVKTALGNDETLSTIQLDFLLPERFELTYIGADGEEHRPVMIHRGIVSTMERFT 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
             +IE +KG  P WL+P Q  V  I++ A ++YA E+A  L+ H +  + D RNE + YK
Sbjct: 529 AYLIETYKGAFPTWLAPHQVTVIPISNEAHIDYAWEVAKELRDHGIRADVDDRNEKMQYK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           IR+   KK+P  +I GDKE    ++ +RR+GS  T   S+
Sbjct: 589 IRQSQTKKVPYQLIVGDKEVENGTVNVRRYGSKQTHTESI 628


>gi|299535482|ref|ZP_07048804.1| threonyl-tRNA synthetase 1 [Lysinibacillus fusiformis ZC1]
 gi|298729243|gb|EFI69796.1| threonyl-tRNA synthetase 1 [Lysinibacillus fusiformis ZC1]
          Length = 643

 Score =  533 bits (1374), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 267/652 (40%), Positives = 413/652 (63%), Gaps = 20/652 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSI 59
           M   IKLTFPDG++K F    +  DVA SIS  L KKA A  ING + DL  P+ E  +I
Sbjct: 1   MSEMIKLTFPDGAVKEFAKGTSTDDVALSISPGLRKKAYAGKINGVLVDLKTPIEEDATI 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D  +L ++RHS AH+ A+A++ ++P+ ++ IGP+IE GFYYD D   P ++++L
Sbjct: 61  AIITQDDEEALEILRHSTAHLTAQAIKRLFPDAKLGIGPVIEGGFYYDIDSPTPITAEDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEK+M++IIA +    ++ +S  +A+ L+E   + YK+E+LE+IPA E V++Y QGE+
Sbjct: 121 PAIEKEMKKIIAENLEVERKNVSRAEAQALYEEIGDEYKLELLEAIPADEQVSIYYQGEF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRG HV STG++++ FKL+ +AGAYWRG+S+  ML RIYGTA+  ++EL  +L  LE
Sbjct: 181 FDLCRGIHVPSTGKLRE-FKLLSLAGAYWRGNSDNKMLQRIYGTAFFKKEELKHHLQMLE 239

Query: 240 ESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTP 297
           E+++RDHRK+ +E++LF  ++  G G+  W   G  I + +  Y+  +++   Y+ + TP
Sbjct: 240 EAKERDHRKIGKELELFTTSQKVGQGLPLWLPNGATIRRVIERYIVDKELSLGYKHVYTP 299

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +  + L+Q SGHWD Y+ ++F     D+      T  ++PMNCP H+ V+ + + SYR 
Sbjct: 300 VLGSKELYQTSGHWDHYQDSIFPPMEMDN-----ETLIMRPMNCPHHMMVYKNSMHSYRN 354

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AE G+++R E SG++ GL RVRG T +DAH+F   +Q+  E  K+  LI+ +YKD
Sbjct: 355 LPLRIAELGTMHRYEMSGAVSGLQRVRGMTLNDAHIFVRPDQIKAEFQKVVQLILEVYKD 414

Query: 418 FGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           F       +LS R     EK    DA+W+ A++++K  +D +       ++     GE A
Sbjct: 415 FDLHDYSFRLSYRDPADTEKYFDDDAMWEKAQSMLKEAMDELG------LDYFEAEGEAA 468

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  +K AIG++    T+Q+DF LP RF+  YV    +   PV+IHR V  ++ER
Sbjct: 469 FYGPKLDVQVKTAIGKEETLSTVQLDFLLPERFDLTYVGEDGKPHRPVVIHRGVVSTMER 528

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETIN 592
           F+  +IE +KG  P WL+P+Q  V  +++ A  +YA++I   L +  L +E D R E + 
Sbjct: 529 FVAFLIEEYKGAFPTWLAPVQVEVIPVSNEAHFDYAKQIEEQLTAAGLRVEMDDREEKLG 588

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           YKIRE  +KKIP +++ GDKE     + +RR+GS  ++ +S  D +  +  E
Sbjct: 589 YKIREAQMKKIPYMLVIGDKEVEANGVNVRRYGSKDSETISFEDFLSTIKTE 640


>gi|282882529|ref|ZP_06291150.1| threonine--tRNA ligase [Peptoniphilus lacrimalis 315-B]
 gi|281297671|gb|EFA90146.1| threonine--tRNA ligase [Peptoniphilus lacrimalis 315-B]
          Length = 636

 Score =  533 bits (1374), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 269/640 (42%), Positives = 398/640 (62%), Gaps = 16/640 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPE 65
           +T PDG  K F    +  +V +SIS  L + +V   +N KV   +D + E S  +++  +
Sbjct: 3   ITLPDGEKKEFEKGISVGEVTKSISEGLYRDSVGAKVNDKVLGNADKINEDSTFKVLKLD 62

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D     ++ HS +H+MA A+++++P  + AIGP I+ GFYYD D +  F  ++   IEKK
Sbjct: 63  DLEGQKILWHSASHLMAYAIETLYPNTKFAIGPAIDSGFYYDMDLDHRFVEEDFQAIEKK 122

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M E+   D   ++  ++ + A + F+ K + YKVE++E +   E +TLY+ GE+ DLCRG
Sbjct: 123 MIELAREDLKIVRVDITRDAAIKYFKEKGQDYKVELIEDLAEDEPITLYQMGEFTDLCRG 182

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PH+ ST ++K   KL+ +AGAYWRGDSN  ML RIYG A++ +++L +++   EE+EKRD
Sbjct: 183 PHLESTKKIKAV-KLLSIAGAYWRGDSNNKMLQRIYGIAFDKKKKLDEFIEKREEAEKRD 241

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHL 304
           HRKL RE+DLF + E+G G  F+H  G      L+S+ +  +++  Y EI TP +L++ L
Sbjct: 242 HRKLGRELDLFSMHEEGPGFPFFHPNGMITRNNLLSWWKNVLQERGYGEILTPVILNEDL 301

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W +SGHWD Y+ NM+  +       D   +A+KPMNCPG   +++    SYR+LP+R AE
Sbjct: 302 WHRSGHWDHYKENMYFTEI------DEEGYAVKPMNCPGSTLIYSTTPHSYRDLPLRYAE 355

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FG V+R+E SG+LHGL RVR FTQDDAH++C   Q+ +E  +I +L   +Y  FGF K  
Sbjct: 356 FGLVHRHELSGALHGLFRVRSFTQDDAHIYCLPNQIKSEVFEIIDLANLLYDTFGF-KYS 414

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           V+LSTRP+  +G    W++AE  +K  L+  +      IN G    +GAFYGPK +Y L+
Sbjct: 415 VELSTRPDDYMGDLGSWNEAEKALKEALE--EKGMPYTINEG----DGAFYGPKIDYHLE 468

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           DAIGR WQCGTIQ+DF LP  F   YV     K  PVM+HRA+FGS+ERF+GI+IE+F G
Sbjct: 469 DAIGRTWQCGTIQLDFQLPQNFELTYVAEDGSKKRPVMLHRALFGSVERFMGILIEHFAG 528

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             PLWLSP+Q  +  ++     YA E+ + LK   + ++ D R E + YKIRE  +KK+ 
Sbjct: 529 KFPLWLSPVQVEIIPVSEKFKPYAGEVFDQLKKAGIRVKIDERAEKVGYKIREAQLKKVN 588

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            +++ G+KE     + +R+      + V +   I  L KE
Sbjct: 589 YMLVIGEKETESHKLSVRKRSGEEVKDVEVSKFIEDLKKE 628


>gi|222100818|ref|YP_002535386.1| Threonyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
 gi|254783544|sp|B9KAN7|SYT_THENN RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|221573208|gb|ACM24020.1| Threonyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
          Length = 640

 Score =  533 bits (1374), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 270/646 (41%), Positives = 412/646 (63%), Gaps = 26/646 (4%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           IK+  PDGS + +       ++A  +     KK +   ++ ++ DL  P+ R+  I  +T
Sbjct: 3   IKVVLPDGSEREYEKGTKPMEIAREVG---IKKVIGAVVDEELWDLKRPLERDCRIRFVT 59

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPE--VQVAIGPIIEDGFYYDFD-KEQPFSSDELA 120
            EDP +    RH+ AHI+A+AV  ++ +  V++ IGP IE+GFYYDFD +    + ++L 
Sbjct: 60  LEDPEAPEFYRHTMAHILAQAVMRLYGKENVKLGIGPTIENGFYYDFDIRNGKLTEEDLP 119

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IE++M++II  + P  ++ +S ++A+E+F  K + YK+E++E I   + VT+YRQGE+ 
Sbjct: 120 RIEQEMKKIIKENLPIEREEISKDEAKEIF--KDQPYKLELIEEIEG-DTVTIYRQGEFV 176

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ STG VK F KL+ V+GAYWRG    PML+R+YGTA+  +++L  YL FLEE
Sbjct: 177 DLCRGPHLPSTGVVKHF-KLLSVSGAYWRGSEKNPMLTRVYGTAFAKKEDLENYLKFLEE 235

Query: 241 SEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++KRDHRKL  +++LF +  D   G+ F+  +G  +   L+++ R   ++  Y+EI TP 
Sbjct: 236 AQKRDHRKLGPQLELFMLNTDYAPGMPFFLPRGVIVLNELMNFSRELHRERGYQEIFTPL 295

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++++ LW+ SGHWD Y  NM+ ++  ++       +A+KPMNCPGH+ V+     SYR+L
Sbjct: 296 IMNEQLWRISGHWDHYAENMYFIEKGEER------YAVKPMNCPGHILVYKSRAVSYRDL 349

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R  EFG V+R E SG LHGLMRVR FTQDDAH+FCT +Q+ +E L +  LI +IY  F
Sbjct: 350 PLRFFEFGRVHRYERSGVLHGLMRVRSFTQDDAHIFCTPDQIEDEILGVLELINTIYSQF 409

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF    V+LST PE  +G +A+W+ A N +K  LD  +     R+N G    EGAFYGPK
Sbjct: 410 GF-TYRVELSTMPEDHMGDEAIWEKATNALKKALD--RAGLPYRVNEG----EGAFYGPK 462

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++ +KD++GR+WQC TIQ+DF +P +FN  Y+   + +   VMIHRA++GS+ERF GI+
Sbjct: 463 IDFHIKDSLGREWQCATIQLDFMMPEKFNVTYIGPDNREHTAVMIHRAIYGSLERFFGIL 522

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+F G  P W++P+Q  V  I+    E A+++A +L      +  D R ET+ Y+IR+ 
Sbjct: 523 IEHFAGAFPTWIAPVQVAVIPISDKHSEGAKKVATMLSREGFRVFLDDRRETLGYRIRQA 582

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            I+KIP +++ GD+E     + +R       + V +   I  L KE
Sbjct: 583 QIQKIPYMVVLGDRELESGKLSVRTRSGKEIKDVEMDHFIDTLKKE 628


>gi|322411327|gb|EFY02235.1| threonyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           dysgalactiae ATCC 27957]
          Length = 647

 Score =  533 bits (1374), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 275/643 (42%), Positives = 412/643 (64%), Gaps = 23/643 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+TFPDG+++ F    T  ++AESIS+SLAKKA+A   NG++ D +  + E GSIEI+T
Sbjct: 2   IKITFPDGAVREFESGVTTFEIAESISKSLAKKALAGKFNGQLIDTTRAIEEDGSIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
           P+   +  V+RHS AH+ A+A + ++P + + +GP I +GFYYD D  +   S+++L +I
Sbjct: 62  PDHEDAYDVLRHSAAHLFAQAAKRLFPNLHLGVGPAIAEGFYYDTDNADGQISNEDLPRI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +MQ+I+  + P +++ ++ E+A ELF  K + YKVE++    A   +T+YRQGE+ DL
Sbjct: 122 EAEMQKIVKENYPCIREEVTKEEALELF--KDDPYKVELINE-HAGAGLTVYRQGEFVDL 178

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG+++  F+L+ VAGAYWRG+S+  M+ R+YGTAW  +++L  YL  LEE++
Sbjct: 179 CRGPHVPSTGRIQ-VFRLLNVAGAYWRGNSDNNMMQRVYGTAWFDKKDLKAYLTRLEEAK 237

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVL 300
           +RDHRKL +E+DLF I+++ G G+ FW   G  I +TL  Y+  K +   Y+ + TP + 
Sbjct: 238 ERDHRKLGKELDLFMISQEVGQGLPFWLPDGATIRRTLERYITDKELASGYQHVYTPPLA 297

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
              L++ SGHW+ Y+ +MF V      + D   F L+PMNCP H+ V+ + + SYRELP+
Sbjct: 298 SVELYKTSGHWEHYQEDMFPVM----DMGDGEEFVLRPMNCPHHIQVYKNHVHSYRELPI 353

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G ++R E SG+L GL RVR  T +D H+F T EQ+ +E  +   LII +Y+DF  
Sbjct: 354 RIAELGMMHRYEKSGALSGLQRVREMTLNDGHIFVTPEQIRDEFKRTLQLIIDVYEDFNL 413

Query: 421 EKIMVKLSTR-PE---KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
                +LS R PE   K   +D +W++A+ ++KG +D +       ++     GE AFYG
Sbjct: 414 TDYRFRLSYRDPEDTHKYYDNDEMWENAQAMLKGAMDDMG------VDYFEAEGEAAFYG 467

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK +  +K A+G +    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF  
Sbjct: 468 PKLDIQVKTALGNEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMIHRGVISTMERFTA 527

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKI 595
           I+IE +KG  P WL+P Q  V  I++ A ++YA EIA  L+   +  + D RNE + YKI
Sbjct: 528 ILIETYKGAFPTWLAPHQVTVIPISNEAHIDYAWEIAKTLRDRGVRADVDDRNEKMQYKI 587

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           R     KIP  +I GDKE  E+S+ +RR+GS  T   S+ D +
Sbjct: 588 RASQTSKIPYQLIVGDKEMEEKSVNVRRYGSKATHTESVEDFV 630


>gi|289422357|ref|ZP_06424203.1| threonine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
 gi|289157192|gb|EFD05811.1| threonine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
          Length = 641

 Score =  533 bits (1373), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 265/620 (42%), Positives = 395/620 (63%), Gaps = 16/620 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           IK+   DGS+  F    +  DVA+ IS   A+  +  +++G++  L++ + ++  +    
Sbjct: 2   IKVELKDGSVLEFEDGVSLLDVAKGISDGFARSVLVGSVDGRMASLNEKLDKDCKVNFFK 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D     V RH+ AHI A+AV+ +WP+ ++AIGP I++GFYYD D +     ++L +IE
Sbjct: 62  FDDAEGKEVFRHTSAHIFAQAVKRLWPQAKLAIGPAIDNGFYYDIDLDYRLVPEDLEKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M++I+  D       +S E+A ++ +   E YKVE++E +PA+E +++YRQG++ DLC
Sbjct: 122 AEMKKIVKEDLKIEGFEVSREEAIKMMKEIGEDYKVEMIEDLPAEEVISMYRQGDFVDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH++ST +VK F KL  +AGAYWRGD N  ML R+YGT++   ++L  YL  LEE++K
Sbjct: 182 RGPHLQSTKKVKAF-KLQSIAGAYWRGDENNKMLQRVYGTSFEKNKDLEAYLKMLEEAKK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRK+ +E+ LF I E+G G   +  +G  + Q+L+ Y     ++  Y EI TP +L++
Sbjct: 241 RDHRKIGKELGLFMIPEEGPGFPLFLPRGTALKQSLMKYWEEIHREAHYVEIETPIILNR 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW  Y+ NM+ V+       D   +A+KPMNCPG +  +   L SYR+ P+R+
Sbjct: 301 KLWETSGHWFHYKENMYTVQI------DEEDYAIKPMNCPGAMLYYKSQLHSYRDFPMRV 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            E G V+R+E SG+LHGLMRVR FTQDDAH+F   EQ+ +E   + NLI  +Y  FGF  
Sbjct: 355 GERGRVHRHELSGALHGLMRVRAFTQDDAHIFMLPEQIRDEIKGVVNLIDKVYTKFGF-S 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +G+D  W  AE+ ++G L+ +     D I   V  G+GAFYGPK ++ 
Sbjct: 414 YHVELSTRPEDSMGTDEEWAIAEDGLRGALEEL---GMDYI---VNEGDGAFYGPKIDFH 467

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+D IGR WQCGTIQ+D  LP RF+A YV    EK  P+MIHR   GSIERFIGI+IEN+
Sbjct: 468 LRDCIGRTWQCGTIQLDMQLPQRFDATYVGKDGEKHRPIMIHRVALGSIERFIGILIENY 527

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P+WL+P Q  V +++    E+A+E+   L    + +E D R E + +KIRE  ++K
Sbjct: 528 AGKFPVWLAPCQVKVLSVSDKYNEFAKELVEKLFDAGIRVELDDRAEKVGFKIREAQLEK 587

Query: 603 IPIIIICGDKEASERSIGIR 622
           IP +++ G+KE     + +R
Sbjct: 588 IPYMLVVGEKEMESGLLSVR 607


>gi|116872988|ref|YP_849769.1| threonyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|123458497|sp|A0AJ08|SYT_LISW6 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|116741866|emb|CAK20990.1| threonyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
          Length = 640

 Score =  533 bits (1373), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 265/638 (41%), Positives = 407/638 (63%), Gaps = 20/638 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           +K+TFPDG++K F    + +D+A SIS  L KKA+A  +NG++ DL  P+ E G+IEI+T
Sbjct: 1   MKITFPDGAVKEFEPGVSTADIAASISPGLKKKALAGKLNGELLDLVTPIHEDGAIEIVT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+   +L ++RHS AH+MA+A++ ++P+V+  +GP IE GFYYD D E   S + L +IE
Sbjct: 61  PDHEDALGILRHSTAHLMAQALKRLYPDVKFGVGPAIESGFYYDIDTEAVISDESLVEIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+MQ+I+  + P  ++ +S E+A + F++  + YK+E++E+IP  E VT+Y QGE+FDLC
Sbjct: 121 KEMQKIVRENVPIEREVVSREEAIKRFKAIGDQYKLELIEAIPKDETVTIYTQGEFFDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RG HV STG++ + FKL+ VAGAYWRGDSN  ML RIYGTA+  +  L +++   +E+++
Sbjct: 181 RGVHVPSTGKI-QVFKLLSVAGAYWRGDSNNKMLQRIYGTAFFDKNGLKEFIQMQKEAKE 239

Query: 244 RDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLD 301
           RDHRKL +E++LF +  E G G+  W  KG  I + +  Y+  ++ +  Y  + TP + +
Sbjct: 240 RDHRKLGKELELFTNSIEVGQGLPLWLPKGATIRRVIERYIVDKEERLGYNHVYTPIMAN 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             L++ SGHWD Y  +MF     D+         L+PMNCP H+ ++ + + SYRELP+R
Sbjct: 300 VELYKTSGHWDHYHEDMFPTMKMDN-----EELVLRPMNCPHHMMIYKNDIHSYRELPIR 354

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AE G ++R E SG+L GL RVRG T +DAHVF   +Q+ +E  ++  LI+ +YKDF  +
Sbjct: 355 IAELGMMHRYEMSGALSGLQRVRGMTLNDAHVFVRPDQIKDEFKRVVELILEVYKDFDIK 414

Query: 422 KIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
               +LS R     EK    DA+W+ A+ ++K  +D +     D        GE AFYGP
Sbjct: 415 DYSFRLSYRDPKNTEKYFDDDAMWEKAQAMLKSAMDEM---GMDYFEAE---GEAAFYGP 468

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  +K AIG++    T+Q+DF LP RF+  Y+    EK  PV+IHR V  ++ERF+  
Sbjct: 469 KLDVQVKTAIGKEETLSTVQLDFLLPERFDLTYIGEDGEKHRPVVIHRGVVSTMERFVAY 528

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +IE +KG  P WL+P+Q  +  + + A ++Y++ + + L+   L  E D RNE + YKIR
Sbjct: 529 LIEEYKGAFPTWLAPVQMELIPVNADAHLDYSKGVQDKLQRAGLRSEVDDRNEKLGYKIR 588

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           E   KKIP  ++ GD+E    S+ +RR+GS  ++ + L
Sbjct: 589 EAQTKKIPYALVLGDQEMEAGSVNVRRYGSKDSETMDL 626


>gi|332701961|ref|ZP_08422049.1| threonyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay]
 gi|332552110|gb|EGJ49154.1| threonyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay]
          Length = 655

 Score =  533 bits (1373), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 259/610 (42%), Positives = 390/610 (63%), Gaps = 25/610 (4%)

Query: 22  TGSDVAESISRSLAKK----AVAVAINGKVCDLSD--PVREGSIEIITPEDPRSLAVIRH 75
           +G  V E++S+ ++KK     +A   NG+  DLS   P    ++E +  + P  L +IRH
Sbjct: 14  SGVSVGEALSQVVSKKKLKEVLAAKCNGQTLDLSRTVPTDCAALEPVFEDSPEGLDIIRH 73

Query: 76  SCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSP 135
           S AH+MAEAV+ ++P  +V IGP I  GFYYDF+ E+ F+ ++L +IE++M  +  +D P
Sbjct: 74  SAAHLMAEAVKKLFPTAKVTIGPAIASGFYYDFEFERTFTPEDLEKIEQEMLRLAGKDEP 133

Query: 136 FLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVK 195
           F  + L  ++A++LF S  E YK+EI+E + A + V+LY  G + DLCRGPHV S+G++K
Sbjct: 134 FECRVLPADEAKDLFASMGEPYKIEIIEDLGA-QTVSLYTNGSFVDLCRGPHVPSSGRIK 192

Query: 196 KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDL 255
            F KLM VAGAYWRGD  R  L RIYGTA+ + ++L ++L  +EE++KRDHRKL  ++DL
Sbjct: 193 AF-KLMSVAGAYWRGDEKRQQLQRIYGTAFASPKDLKKHLERIEEAKKRDHRKLGTQLDL 251

Query: 256 FHIA-EDGSGVIFWHRKGWKIFQTLISYMRRK--IKDDYEEINTPQVLDQHLWQQSGHWD 312
           F    E G+G++ WH KG  + +T+I    RK  ++  Y  +  PQ+L + LW++SGH++
Sbjct: 252 FSFCDEAGAGMVIWHPKG-ALIRTIIEDFERKEHLRRGYHIVQGPQLLKRELWERSGHYE 310

Query: 313 SYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE 372
            YR NM+  +       D + + +KPMNC  H+ ++   ++SYR+LP+RL E G V+R+E
Sbjct: 311 HYRQNMYFTEI------DEQAYGVKPMNCLSHMLIYKSKVRSYRDLPLRLFELGVVHRHE 364

Query: 373 PSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
            SG LHGL+RVR FTQDDAH+ C  +Q+ +E + + + +  +   FGF     ++STRPE
Sbjct: 365 KSGVLHGLLRVRQFTQDDAHIICRPDQLEDEIIGVVHFVRDVMGIFGF-NFEAEISTRPE 423

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
           K +GSDA W+ A N +   LD         +  G+  G+GAFYGPK + ++KDA+ R WQ
Sbjct: 424 KSIGSDADWERATNALMKALDKAG------LKYGINEGDGAFYGPKIDIVIKDALDRRWQ 477

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
           C TIQ DF LP RF+  YV    E+  PVM+HR + GS+ERFIG++ E+F G  P+WL+P
Sbjct: 478 CATIQCDFTLPERFDLAYVGQDGERHRPVMVHRVILGSLERFIGVLTEHFAGAFPVWLAP 537

Query: 553 IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
            Q  +  +T +  EY  ++ + L+   +  E D RNE + YK+RE  ++KIP +++ GDK
Sbjct: 538 EQVRILNVTDAQAEYTSKVLDALREQGIRAEADLRNEKLGYKVREAQLEKIPYMLVVGDK 597

Query: 613 EASERSIGIR 622
           E     + +R
Sbjct: 598 EVETGVVNVR 607


>gi|322377382|ref|ZP_08051873.1| threonine--tRNA ligase [Streptococcus sp. M334]
 gi|321281582|gb|EFX58591.1| threonine--tRNA ligase [Streptococcus sp. M334]
          Length = 647

 Score =  533 bits (1373), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 268/644 (41%), Positives = 411/644 (63%), Gaps = 23/644 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           I +TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  + E GSIEI+T
Sbjct: 2   INITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGSIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQI 122
           P+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D      S+++L +I
Sbjct: 62  PDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNTAGQISNEDLPRI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWFD 181
           E++MQ+I+  + P +++ ++ ++ARE+F  K + YK+E++E     E  +T+YRQGE+ D
Sbjct: 122 EEEMQKIVKENFPSIREEVTKDEAREIF--KNDPYKLELIEEHSEDEGGLTIYRQGEYVD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++  F L+ VAGAYWRG+S+  M+ RIYGTAW  +++L  YL   EE+
Sbjct: 180 LCRGPHVPSTGRIQ-IFHLLNVAGAYWRGNSDNAMMQRIYGTAWFDKKDLKNYLQMREEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+++ G G+ FW   G  I + L  Y+  +++   Y+ + TP +
Sbjct: 239 KERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVDKELASGYQHVYTPPL 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHWD Y+ +MF        + D   F L+PMNCP H+ VF H + SYRELP
Sbjct: 299 ASVELYKTSGHWDHYQEDMFPTM----DMGDGEEFVLRPMNCPHHIQVFKHHVHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y+DF 
Sbjct: 355 IRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYEDFN 414

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
             +   +LS R     EK   +D +W++A+ +++  LD +       ++     GE AFY
Sbjct: 415 LTEYRFRLSLRDPEDKEKYFDNDQMWENAQTMLRAALDEMG------VDYFEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G++    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF 
Sbjct: 469 GPKLDIQVKTALGKEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMIHRGVISTMERFT 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IEN+KG  P WL+P Q  +  +++   V+YA E+A  L+   +  + D RNE + +K
Sbjct: 529 AILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAKKLRDRGVRADVDERNEKMQFK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           IR     KIP  +I GDKE  + ++ +RR+G   TQ VS+ D +
Sbjct: 589 IRASQTSKIPYQLIVGDKEMEDGTVNVRRYGQKETQTVSVDDFV 632


>gi|296449369|ref|ZP_06891150.1| threonine--tRNA ligase [Clostridium difficile NAP08]
 gi|296880697|ref|ZP_06904650.1| threonine--tRNA ligase [Clostridium difficile NAP07]
 gi|296261715|gb|EFH08529.1| threonine--tRNA ligase [Clostridium difficile NAP08]
 gi|296428315|gb|EFH14209.1| threonine--tRNA ligase [Clostridium difficile NAP07]
          Length = 670

 Score =  533 bits (1372), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 278/642 (43%), Positives = 405/642 (63%), Gaps = 16/642 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           IK+   DGSIK F    +  DVA+SIS  LA+  VA ++NG+V  L   +  +  + +  
Sbjct: 33  IKVALKDGSIKEFENAISVMDVAKSISEGLARNVVAASVNGEVVGLDHIIDTDCDLNLFK 92

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            ED     V RH+ AHI+A+A++ ++PE ++AIGP IE+GFYYD D +     ++L +IE
Sbjct: 93  FEDKEGKEVFRHTSAHILAQAIKRLYPEAKLAIGPSIENGFYYDIDLDHRLVPEDLEKIE 152

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M++I   D    +  L   +A EL + + E YKVE++  +P  E ++ Y+QG++ DLC
Sbjct: 153 AEMKKIAKEDLKIERFELPRNEALELMKEQGEDYKVELISDLPESEIISFYKQGDFTDLC 212

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ ST +VK   KL  VAGAYWRGD N  ML RIYGT++   ++L +YL+ LEE++K
Sbjct: 213 RGPHLPSTKKVKAV-KLQSVAGAYWRGDENNKMLQRIYGTSFEKNKDLEEYLHLLEEAKK 271

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           RDHRKL +E+ LF I E+G G   +  KG ++   L+ + R    K  Y EI +P +L++
Sbjct: 272 RDHRKLGKELGLFMIPEEGPGFPMFLPKGMELKNELLKFWREIHRKAGYIEIESPIILNR 331

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW  Y+ NM+ VK  D+       +A+KPMNCPG +  +N  L SYR+ P+R+
Sbjct: 332 KLWETSGHWYHYKENMYTVKIDDED------YAIKPMNCPGGLIYYNSQLHSYRDFPMRV 385

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AE G V+R+E SG+L GLMRVR FTQDD+H+F   EQ+ +E   + NLI  IYK FGFE 
Sbjct: 386 AELGRVHRHELSGALQGLMRVRAFTQDDSHIFMLPEQIKDEIKGVANLIDGIYKTFGFE- 444

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             ++LSTRPE  +GS+  W+ AEN ++  L+ +       +   +  G+GAFYGPK ++ 
Sbjct: 445 YNLELSTRPENSMGSNEEWEAAENGLREALEELG------LPYTINEGDGAFYGPKIDFH 498

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LKD +GR WQCGTIQ+D  LP +F+  Y+    EK  PVMIHR  FGSIERFIGI+IE++
Sbjct: 499 LKDCLGRTWQCGTIQLDMQLPRQFDNTYIGQDGEKHRPVMIHRVAFGSIERFIGILIEHY 558

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P+WLSP Q  +  I+   ++YA E+   L    + +E D R E I +KIRE  ++K
Sbjct: 559 AGKFPVWLSPTQVKILPISDKFMDYANEVKKELFDKGIRVELDDRAEKIGFKIREAQLEK 618

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P ++I G+KE ++ ++ +R         + L + I  ++KE
Sbjct: 619 VPYMLIVGEKEVADNNVSVRSRDKGEIGSIKLDEFIASISKE 660


>gi|209558991|ref|YP_002285463.1| threonyl-tRNA synthetase [Streptococcus pyogenes NZ131]
 gi|238065119|sp|B5XKA6|SYT_STRPZ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|209540192|gb|ACI60768.1| Threonyl-tRNA synthetase [Streptococcus pyogenes NZ131]
          Length = 647

 Score =  533 bits (1372), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 274/643 (42%), Positives = 408/643 (63%), Gaps = 23/643 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+TFPDG+++ F    T  D+AESIS+SLAKKA+A   N ++ D +  + E GSIEI+T
Sbjct: 2   IKITFPDGAVREFESGVTTFDIAESISKSLAKKALAGKFNDQLIDTTRAIEEDGSIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
           P+   +  V+RHS AH+ A+A + ++P + + +GP I +GFYYD D  E   S+++L +I
Sbjct: 62  PDHKDAYEVLRHSAAHLFAQAAKRLFPNLHLGVGPAIAEGFYYDTDNAEGQISNEDLPRI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +MQ+I+  + P +++ ++ E+A ELF  K + YKVE++    A   +T+YRQGE+ DL
Sbjct: 122 EAEMQKIVTENYPCIREEVTKEEALELF--KDDPYKVELINE-HAGAGLTVYRQGEFVDL 178

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG+++  F L+ VAGAYWRG+S+  M+ RIYGTAW  +++L  YL  LEE++
Sbjct: 179 CRGPHVPSTGRIQ-VFHLLNVAGAYWRGNSDNNMMQRIYGTAWFDKKDLKAYLTRLEEAK 237

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVL 300
           +RDHRKL +E+DLF I+++ G G+ FW   G  I +TL  Y+  K +   Y+ + TP + 
Sbjct: 238 ERDHRKLGKELDLFMISQEVGQGLPFWLPDGATIRRTLERYITDKELASGYQHVYTPPLA 297

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
              L++ SGHWD Y+ +MF V      + D   F L+PMNCP H+ V+ + ++SYRELP+
Sbjct: 298 SVELYKTSGHWDHYQEDMFPVM----DMGDGEEFVLRPMNCPHHIQVYKNHVRSYRELPI 353

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G ++R E SG+L GL RVR  T +D H+F T EQ+  E  +   LII +Y DF  
Sbjct: 354 RIAELGMMHRYEKSGALSGLQRVREMTLNDGHIFVTPEQIQEEFQRALQLIIDVYADFNL 413

Query: 421 EKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
                +LS R      K   +D +W++A++++K  LD +       ++     GE AFYG
Sbjct: 414 TDYRFRLSYRDPNDTHKYYDNDEMWENAQSMLKAALDEMG------VDYFEAEGEAAFYG 467

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK +  +K A+G +    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF  
Sbjct: 468 PKLDIQVKTALGNEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMIHRGVISTMERFTA 527

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKI 595
           I+IE +KG  P WL+P Q  V  I++ A ++YA E+A +L+   +  + D RNE + YKI
Sbjct: 528 ILIETYKGAFPTWLAPHQVTVIPISNEAHIDYAWEVAKILRDRGVRADVDDRNEKMQYKI 587

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           R     KIP  +I GDKE  ++S+ +RR+GS  T   S+ D +
Sbjct: 588 RASQTSKIPYQLIVGDKEMEDKSVNVRRYGSKATHTESVEDFV 630


>gi|188996057|ref|YP_001930308.1| threonyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
 gi|229558457|sp|B2V6M2|SYT_SULSY RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|188931124|gb|ACD65754.1| threonyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 643

 Score =  533 bits (1372), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 269/636 (42%), Positives = 412/636 (64%), Gaps = 28/636 (4%)

Query: 6   KLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITP 64
           K TF +G         T  D+ ++++    K  V   +NG++ D+  P+ + G+++ +  
Sbjct: 12  KFTFNEG--------ITLKDILKNLNGKF-KDVVGGKLNGEIIDIHTPINQSGNLKFLKK 62

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPE--VQVAIGPIIEDGFYYDFDKE-QPFSSDELAQ 121
           ED  SL ++RHS AHIMA+A++ I+ +  V + IGP  E GFYYD + E +  + ++L Q
Sbjct: 63  EDKESLEILRHSLAHIMAQALKEIYGDENVHLGIGPTTEHGFYYDVEIEGKSLTDEDLPQ 122

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE-SIPAKENVTLYRQGEWF 180
           IE+KM+EII +     +  L  E+A + FE+KKE YK++I++ +IP  E ++LY+QG++ 
Sbjct: 123 IEEKMKEIIKKGYQIERFELPREEAIKFFENKKEIYKIDIIKHNIPEGEPISLYKQGDFV 182

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ ST +   F KL+ V+GAYWRG    PML RIYG A+ +++EL  YL  LEE
Sbjct: 183 DLCRGPHLPSTDKAGAF-KLISVSGAYWRGKETNPMLQRIYGVAFWSEKELKDYLNMLEE 241

Query: 241 SEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTL-ISYMRRKIKDDYEEINTPQ 298
           ++KRDHRK+ ++++LF I E+ G G+  W  KG  I + +  ++ +  +K  Y+ + TP 
Sbjct: 242 AKKRDHRKIGKDLELFLIDEEIGGGLAIWLPKGAIIRKEIEDAWKKEHLKRGYQLVYTPH 301

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V  + LWQ SGH   Y+ NM+     ++       + +KPMNCP HV ++    +SY+E 
Sbjct: 302 VGKEQLWQTSGHLSFYQENMYPRMQIEE-----EGYYVKPMNCPFHVEIYKSKQRSYKEF 356

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAE G+VYR E SG+LHGLMRVRGFTQDDAH+ C ++Q+ +E  ++ NL ++  K +
Sbjct: 357 PIRLAELGTVYRYERSGALHGLMRVRGFTQDDAHIICREDQVEDEIREVLNLALNTLKSY 416

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF++  V LST+PEK VG D +W+ AEN ++  +++        ++  +  G GAFYGPK
Sbjct: 417 GFDEFEVYLSTKPEKYVGDDKMWEVAENSLRKAIESTG------LDYKIDDGGGAFYGPK 470

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +  +KDAIGR WQC TIQ DFNLP RF+ +Y+   ++K  P MIHRA+FGSIERFIG++
Sbjct: 471 IDVKIKDAIGRLWQCSTIQFDFNLPERFDMYYIGEDNQKHRPYMIHRAIFGSIERFIGVL 530

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           +E++ G LP+WLSP+Q  +  I    +EYA+ +   L  + + +E D RNE +N KIR+ 
Sbjct: 531 LEHYAGFLPVWLSPVQVKIIPIADKHLEYAETVKQKLLENDIRVELDDRNERMNKKIRDA 590

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
            ++KIP +++ GDKEA   ++ +R  G   +Q +S+
Sbjct: 591 ELQKIPFMLVVGDKEAETGTVAVREKGKQGSQTLSI 626


>gi|239618448|ref|YP_002941770.1| threonyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
 gi|259516548|sp|C5CI64|SYT_KOSOT RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|239507279|gb|ACR80766.1| threonyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
          Length = 648

 Score =  532 bits (1371), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 272/623 (43%), Positives = 408/623 (65%), Gaps = 21/623 (3%)

Query: 6   KLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITP 64
           K+  PDGSIK +    T +DVA  +S +LAK+A+ V +NG++ DL+  +  E  I +I  
Sbjct: 4   KIELPDGSIKEYDHPVTAADVAADLSPALAKRAIGVEVNGELWDLTRELPEECKINLILE 63

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIW--PEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
           +DPR+    RH+ +HI+A+AV  I+   +V++ IGP+IE+GFYYDFD  +   + ++L +
Sbjct: 64  KDPRAPEFFRHTFSHILAQAVMRIYGSDKVKLGIGPVIENGFYYDFDLGDIRLTEEDLPK 123

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE++M++II  D    +  L  E+A +L + + + YKVE++E + + +  T YRQGE+ D
Sbjct: 124 IEEEMEKIIKEDLKLERFELPKEEAIKLMKDQNQPYKVELIEDLES-DVATFYRQGEFVD 182

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ STG+VK +FKL+ V+GAYWRGD    ML RIYGTA+  + EL  YL  +EE+
Sbjct: 183 LCRGPHMPSTGKVK-YFKLLSVSGAYWRGDERNKMLQRIYGTAFAKKSELEAYLKMMEEA 241

Query: 242 EKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           +KRDHRK+  ++ LF  + E   G+  +H KG  +   L+ + R    K  Y+E+ TPQ+
Sbjct: 242 KKRDHRKIGPQLGLFSFSYEYAPGMPIYHPKGTIVLNELMKFSREVHSKHGYQEVMTPQI 301

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           ++  LW +SGHWD YR NM+       T KD + +A+KPMNCPGH+ ++     SYR+LP
Sbjct: 302 MNDVLWHRSGHWDHYRDNMYF------TEKDEQQYAIKPMNCPGHILIYKSRAMSYRDLP 355

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           ++L EFG V+R E SG LHGL+RVRGF QDDAH+FCT+EQ+  +   +   +  IY  FG
Sbjct: 356 LKLFEFGKVHRYERSGVLHGLLRVRGFIQDDAHIFCTREQLKEQLKDVIRFVDMIYTPFG 415

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           FE     L TRPE  +G   +WD A   +K  +++I    + ++N G    +GAFYGPK 
Sbjct: 416 FE-YRADLCTRPEDFMGDVEIWDLATEALKDAIESI--GLEYKVNEG----DGAFYGPKI 468

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           ++ + D+IGR+WQC TIQ+DF +P RF   YV   +++  PVMIHRA++GS++RF GI+I
Sbjct: 469 DFHVTDSIGREWQCATIQLDFMMPERFELTYVGPDNKEYRPVMIHRAIYGSLDRFFGILI 528

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E++ G  P WL+P+Q +   I+   V+YA+E+A+ L +  + ++ D + ++ NYKIRE  
Sbjct: 529 EHYAGAFPTWLAPVQVVAIPISDKHVDYAREVADALAAEGVRVDVDEKQKSTNYKIREAQ 588

Query: 600 IKKIPIIIICGDKEASERSIGIR 622
           + KIP ++I GDKE    +I +R
Sbjct: 589 LNKIPYMLILGDKEKESETITVR 611


>gi|300772848|ref|ZP_07082717.1| threonine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861]
 gi|300759019|gb|EFK55846.1| threonine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861]
          Length = 641

 Score =  532 bits (1371), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 277/654 (42%), Positives = 410/654 (62%), Gaps = 31/654 (4%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           IK+T PDGS++ +    + + VA SIS  LA+  +A  +NG++ D S P+ ++ S++++T
Sbjct: 2   IKITLPDGSVREYEKGTSAAQVALSISEGLARNVLAAEVNGEIWDASRPIEQDSSLKLLT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQI 122
             D +  +   HS AH+MAEA+++++P V+  IGP IE GFYYD D  ++ FSSDE  QI
Sbjct: 62  WNDDKGKSTFWHSSAHLMAEALEALYPGVKFGIGPAIETGFYYDVDFGDREFSSDEFKQI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E KM E+  R   F ++ +S  +A + F  K + YK+++++ +     +T Y QG++ DL
Sbjct: 122 EDKMLELAKRKEVFERRAVSKAEALDYFTEKGDEYKLDLIKDL-EDGKITFYSQGDFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ +TG +K   KL  VAGAYWRGD +R  L+RIYG  +    ELT YL F+EE++
Sbjct: 181 CRGPHIPNTGFIKAI-KLTNVAGAYWRGDESRKQLTRIYGVTFPKASELTDYLKFIEEAK 239

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           KRDHRKL +E++LF  +E  G G+  W  KG  + Q LI +M+R ++K  YE + TP + 
Sbjct: 240 KRDHRKLGKELELFAFSEKVGMGLPLWLPKGAALRQKLIDFMQRAQLKAGYEPVVTPHIG 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT------FALKPMNCPGHVAVFNHGLKS 354
            + L+  SGH++ Y          +D+ + ++T      F LKPMNCP H  ++    +S
Sbjct: 300 HKQLYVTSGHYEKY---------GEDSFQPIKTPVEGEEFFLKPMNCPHHCEIYKTKPRS 350

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           Y++LPVR AEFG+VYR E SG LHGL RVRGFTQDDAH+FC  +Q+  E  K+ +L++ +
Sbjct: 351 YKDLPVRFAEFGTVYRYEQSGELHGLTRVRGFTQDDAHLFCRPDQVKEEFKKVIDLVLYV 410

Query: 415 YKDFGFEKIMVKLSTR-PEKR---VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
           +   GFE  + ++S R PE R   +GSD  W  AE  +      I+ + +  + T V  G
Sbjct: 411 FGALGFEDYIAQVSLRDPENRTKYIGSDENWALAERAI------IEAADEKGLPTVVEYG 464

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           E AFYGPK ++++KDA+GR WQ GTIQVD+NLP RF   Y  S + K  PVMIHRA FGS
Sbjct: 465 EAAFYGPKLDFMVKDALGRKWQLGTIQVDYNLPERFELEYTGSDNAKHRPVMIHRAPFGS 524

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
           +ERFI ++IE+  G  PLWL+P Q IV  ++    EYAQ++   L +  +    D R+E 
Sbjct: 525 LERFIAVLIEHCAGRFPLWLAPEQFIVLPVSEKYEEYAQKLLESLNNSDIRGLIDLRDEK 584

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  KIR+  +KK+P ++I G+KEA   ++ +R+ GS     ++  +   +L KE
Sbjct: 585 VGRKIRDAEVKKLPYMLIVGEKEAESGTVSVRKHGSGDVGSMTPEEFREVLIKE 638


>gi|168027962|ref|XP_001766498.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162682407|gb|EDQ68826.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 615

 Score =  532 bits (1371), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 264/582 (45%), Positives = 373/582 (64%), Gaps = 17/582 (2%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           I + T E   +L  IRH+ AH++A AVQ ++PE QV IGP IE GFYYDFD ++ F+  +
Sbjct: 32  IVLPTNESSENLVKIRHTTAHVLAMAVQKLFPEAQVTIGPWIEKGFYYDFDMKEAFTEKD 91

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L +I+K+M  II+R+ P +++ +S E+A    ++  E YK+EILE I + E +T+YR GE
Sbjct: 92  LKKIKKEMDRIISRNLPLVREEVSREEAERRIKAINEPYKLEILEGIKS-EPITIYRIGE 150

Query: 179 -WFDLCRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
            W+DLC GPHV  TGQ+ K+  +L  VAGAYWRGD    ML R+YGTAW T+++L  Y  
Sbjct: 151 DWWDLCAGPHVERTGQLNKRAIELESVAGAYWRGDEKNQMLQRVYGTAWETEEQLKAYQV 210

Query: 237 FLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEI 294
             EE+++RDHR+L ++++LF I ED G G++FWH KG  I   +  Y ++    + YE +
Sbjct: 211 QKEEAKRRDHRRLGQDLNLFSIQEDAGGGLVFWHPKGAMIRHIIEDYWKKMHFANGYELL 270

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
            TP +    LW+ SGH+D Y+ NMF     D    +   + ++PMNCP H+ V+   L+S
Sbjct: 271 YTPHIAKLDLWKTSGHYDFYKENMF-----DQMQIEEELYQIRPMNCPFHIQVYKDALRS 325

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YRELP+R+AE G+VYR E SG+LHGL RVRGFTQDD H+FC  +Q+ +E   + +L   I
Sbjct: 326 YRELPMRVAELGTVYRYERSGTLHGLFRVRGFTQDDGHIFCLPDQIRDEIRGVLDLTEMI 385

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            K FGF K  + LSTRPEK VGSD +W+ A   +K  L+            G+  G GAF
Sbjct: 386 LKQFGFSKFEINLSTRPEKAVGSDEIWEKATTALKSALE------DKGWEYGIDEGGGAF 439

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  ++DAIGR WQC TIQVDFNLP RFN  YV+S + +  P+MIHRA+FGSIERF
Sbjct: 440 YGPKIDVKIEDAIGRKWQCSTIQVDFNLPERFNMVYVDSDTSRKQPIMIHRAIFGSIERF 499

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
            GI+ EN+ G+ PLWL+P+QA +  +T + V+Y +++   LK+  +  E  F  E +   
Sbjct: 500 FGILTENYAGDFPLWLAPVQARLLPVTDNEVDYCKKVVAELKAREIRAEVIF-GERLGKL 558

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
           IR    +KIP++ + G KE    ++ +R         V++ D
Sbjct: 559 IRNAETQKIPVMAVVGRKEVETETLTVRTRHGGELGNVTVAD 600


>gi|284045075|ref|YP_003395415.1| threonyl-tRNA synthetase [Conexibacter woesei DSM 14684]
 gi|283949296|gb|ADB52040.1| threonyl-tRNA synthetase [Conexibacter woesei DSM 14684]
          Length = 643

 Score =  532 bits (1371), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 275/630 (43%), Positives = 404/630 (64%), Gaps = 25/630 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           +K   PDG+       ATG+D A +I   LA+ A+AV ++G + DLS P+ +G+ +EI+T
Sbjct: 1   MKALLPDGTELQLDDGATGADAAAAIGAGLARAALAVKVDGALRDLSAPLHDGARLEIVT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD--KEQPFSSDELAQ 121
           P    +L ++RH  AH++A AV  ++P V+++IGP IE+GFYYDF+       S  +  +
Sbjct: 61  PSSDEALELLRHDTAHVLAAAVIDLYPGVKISIGPPIENGFYYDFEFPDGTVVSDADFER 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-------ENVTLY 174
           IE+KM+E +  D  F+++ +S  +A E F  + + YKVE++E +          E V+LY
Sbjct: 121 IEQKMREHVKADERFVREDVSVGEALERFVRENQPYKVELIEDLVKNADAGDPVETVSLY 180

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
             G + DLCRGPH   T ++K F KL  VAGAYWRGD++R ML+RIYGTA+ ++ +L  +
Sbjct: 181 TNGPFTDLCRGPHGPGTKRIKAF-KLQSVAGAYWRGDASRTMLTRIYGTAFFSKDDLAAH 239

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEE 293
           L  LEE++KRDHR+L RE+ LF  +    G  FW  +G  ++ +L+++ R   +   Y+E
Sbjct: 240 LERLEEAKKRDHRRLGRELKLFQFSAVSPGSAFWLPRGTSLWNSLVAFTREMNEPRGYQE 299

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           + TP + D  LW+ SGHWD YR NMF     D      R  A+KPMNCPGH  +F     
Sbjct: 300 VKTPLIFDSELWRTSGHWDKYRENMFVTHAED------RDLAVKPMNCPGHAHLFRSQRH 353

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYRELPVR +E G ++RNEPSG+LHGLMRVR F QDDAH+FCT+EQ+  E +   +LI  
Sbjct: 354 SYRELPVRYSEPGLLHRNEPSGTLHGLMRVRHFAQDDAHIFCTEEQVHGEVVACLDLIFD 413

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
               FGFE I V+LSTRPE+R+G+D +WD AE  ++  L+  +   + R+N G    +GA
Sbjct: 414 TLGRFGFE-IDVELSTRPERRIGTDEMWDRAEGKLRAALE--QQGLRYRVNEG----DGA 466

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK ++ + D+IGR WQ GT+Q+D++ P RF   YV +   +  PVMIHRA  GS ER
Sbjct: 467 FYGPKIDFHVTDSIGRSWQLGTVQLDYSFPERFELTYVGADDREHRPVMIHRAAMGSYER 526

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           FIG++IE++ G  P+WL+P+QAIV  I     +YA+++   L++  + +E D R E++  
Sbjct: 527 FIGMLIEHWAGEFPVWLAPVQAIVLPIADRHADYARDVVAQLRAARVRVELDDRTESVGR 586

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRR 623
           KIR+  ++KIP +++ GD+E     + +RR
Sbjct: 587 KIRDAELQKIPYMLVIGDREREAGEVALRR 616


>gi|227485697|ref|ZP_03916013.1| threonine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172]
 gi|227236252|gb|EEI86267.1| threonine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172]
          Length = 640

 Score =  532 bits (1371), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 269/643 (41%), Positives = 394/643 (61%), Gaps = 17/643 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           IK+  PD S+K +       DV + IS  L + AV   +NGKV   ++P+ E S   ++ 
Sbjct: 2   IKIKLPDDSVKEYEKGVLVGDVTKDISMGLYRAAVGAVVNGKVMGYAEPIEEDSDFRVVK 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            ED     +  H+ +H+MA A++ +WPE + AIGP I DGFYYD D E  F+ ++L QIE
Sbjct: 62  FEDAEGKEIFWHTTSHVMAAAIKELWPETKFAIGPAIADGFYYDMDLEHRFTPEDLEQIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF-DL 182
           KKM+EI  +D    +  +S ++A ++F+ + + YKVE++E +P  E +TLY+ G+ F DL
Sbjct: 122 KKMKEIAKKDLKLERIEVSRDEALKMFKEEGQDYKVELIEDLPKDELITLYKIGDAFTDL 181

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ ST ++K   KL  +AGAYWRGDS++ ML RIYG ++   ++L +Y    +E  
Sbjct: 182 CRGPHLESTKEIKAI-KLKAIAGAYWRGDSDKAMLQRIYGISFPKAKDLEEYEELQKEIA 240

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD 301
           +RDHRK+ +EMDLF   E+G G  F+H  G  +   L+ + R  +    Y EI TP +L+
Sbjct: 241 RRDHRKIGKEMDLFAFHEEGPGFPFFHPNGMILMNELLGWWRDVLDHSGYGEIKTPLILN 300

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW +SGHWD Y+ NM+  K  D+       +A+KPMNCPG V  +     SYR+LP+R
Sbjct: 301 EDLWHRSGHWDHYKENMYFTKIDDED------YAIKPMNCPGSVLTYASRQHSYRDLPIR 354

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFG V+R+E SG+LHGL RVR FTQDDAHV+C   Q+  E  K+ +L   +Y  FGF 
Sbjct: 355 LAEFGQVHRHELSGTLHGLFRVRTFTQDDAHVYCLPSQIKEEVYKMIDLADLLYSTFGF- 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
           K  ++LSTRP+  +G    WD AE  +K  L+      +  I+  +  G+GAFYGPK ++
Sbjct: 414 KYTMELSTRPDDYMGDIKDWDFAEEQLKLALE------ERGIDYQINPGDGAFYGPKIDF 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L DA  R+WQCGTIQ+DF LP+ F   Y++ + EK  PVM+HRA+ GS+ERFIG++ E+
Sbjct: 468 HLLDAAKREWQCGTIQLDFQLPANFELEYIDENGEKKRPVMLHRALLGSVERFIGVLTEH 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           F G  PLW++P Q  V  +     + A EIA  ++     +  D R+E + YKIR   + 
Sbjct: 528 FAGRFPLWINPRQVEVIPVADRFADKAHEIAKEIEKAGFRVGVDERSEGVGYKIRSAQMM 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +   +++ GDKE     + +R      T+ V+L D I  +++E
Sbjct: 588 RTNYMLVVGDKEIESGLLTVRNRDGEETKDVNLADFIAKISEE 630


>gi|225851210|ref|YP_002731444.1| threonyl-tRNA synthetase [Persephonella marina EX-H1]
 gi|225645886|gb|ACO04072.1| threonyl-tRNA synthetase [Persephonella marina EX-H1]
          Length = 646

 Score =  532 bits (1371), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 265/594 (44%), Positives = 390/594 (65%), Gaps = 19/594 (3%)

Query: 36  KKAVAVAINGKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE--V 92
           K  V   +N ++ DL  P+R G  +  +T +DP SL ++RHS AHIMA+A++ ++ +  V
Sbjct: 35  KNVVGGKLNDQIIDLHTPIRTGGDLTFLTKKDPESLEILRHSFAHIMAQALKELYGDKNV 94

Query: 93  QVAIGPIIEDGFYYDFDKE-QPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFE 151
            + IGP  E+GFYYD + E +  + ++L  IE+KM+EII R+    ++ L  ++A +LFE
Sbjct: 95  HLGIGPTTENGFYYDVEIEGKRLTEEDLPVIEEKMREIIERNCEIERKELPRDEALKLFE 154

Query: 152 SKKEAYKVEILE-SIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRG 210
            K+E YK++I++  IP  E +++Y+Q ++ DLCRGPH+ STG+    FKL+ +AGAYWRG
Sbjct: 155 EKREIYKIDIIKHQIPEGEPISVYQQCDFIDLCRGPHLLSTGEAG-VFKLVSLAGAYWRG 213

Query: 211 DSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWH 269
               PML RIYG A+  +++L +Y+  LEE++KRDHRKL RE++LF I ED G G+  W 
Sbjct: 214 KEGNPMLQRIYGVAFWNEKDLKKYMNMLEEAKKRDHRKLGRELELFIIDEDVGGGLALWL 273

Query: 270 RKGWKIFQTL-ISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTI 328
            KG  I   +  ++    IK  Y+ + TP V  + LWQ SGH D YR NMF      + +
Sbjct: 274 PKGAVIRNEIETAWKEEHIKRGYQLVYTPHVGKEQLWQTSGHVDFYRENMFP-----EMM 328

Query: 329 KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQ 388
            +   + +KPMNCP HV ++    +SY+ELP++LAE G+VYR E SG LHGLMRVRGFTQ
Sbjct: 329 IEEEGYFVKPMNCPFHVEIYKSRQRSYKELPIKLAELGTVYRYERSGVLHGLMRVRGFTQ 388

Query: 389 DDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIM 448
           DDAH+ C ++Q+  E   + +L++   + +GF +  + LSTRPEK VG D +W+ A   +
Sbjct: 389 DDAHIICREDQVEKEIQDVLHLVLDTLRTYGFNEFQIFLSTRPEKSVGDDRMWEVATESL 448

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
           +  ++++    Q      +  G GAFYGPK +  +KDAIGR WQC TIQ DFNLP RF+ 
Sbjct: 449 RKAIESVGLDYQ------IDEGGGAFYGPKIDVKIKDAIGRMWQCSTIQFDFNLPERFDM 502

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYA 568
           +Y+   +++  P MIHRA+FGSIERFIG++IE++ G LPLWLSP+QA +  +  + + YA
Sbjct: 503 YYIGEDNKRHRPYMIHRAIFGSIERFIGVLIEHYAGLLPLWLSPVQAKIIPVADTHIPYA 562

Query: 569 QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           +E+   LK   L +E D R+E +N KIR+  ++KIP ++I GDKE    S+ +R
Sbjct: 563 KEVEKKLKEAGLRVEVDERSERMNRKIRDAELQKIPYMLIVGDKEQQTGSVSVR 616


>gi|255654593|ref|ZP_05400002.1| threonyl-tRNA synthetase [Clostridium difficile QCD-23m63]
          Length = 639

 Score =  532 bits (1371), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 278/642 (43%), Positives = 405/642 (63%), Gaps = 16/642 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           IK+   DGSIK F    +  DVA+SIS  LA+  VA ++NG+V  L   +  +  + +  
Sbjct: 2   IKVALKDGSIKEFENAISVMDVAKSISEGLARNVVAASVNGEVVGLDHIIDTDCDLNLFK 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            ED     V RH+ AHI+A+A++ ++PE ++AIGP IE+GFYYD D +     ++L +IE
Sbjct: 62  FEDKEGKEVFRHTSAHILAQAIKRLYPEAKLAIGPSIENGFYYDIDLDHRLVPEDLEKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M++I   D    +  L   +A EL + + E YKVE++  +P  E ++ Y+QG++ DLC
Sbjct: 122 AEMKKIAKEDLKIERFELPRNEALELMKEQGEDYKVELISDLPESEIISFYKQGDFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ ST +VK   KL  VAGAYWRGD N  ML RIYGT++   ++L +YL+ LEE++K
Sbjct: 182 RGPHLPSTKKVKAV-KLQSVAGAYWRGDENNKMLQRIYGTSFEKNKDLEEYLHLLEEAKK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           RDHRKL +E+ LF I E+G G   +  KG ++   L+ + R    K  Y EI +P +L++
Sbjct: 241 RDHRKLGKELGLFMIPEEGPGFPMFLPKGMELKNELLKFWREIHRKAGYIEIESPIILNR 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW  Y+ NM+ VK  D+       +A+KPMNCPG +  +N  L SYR+ P+R+
Sbjct: 301 KLWETSGHWYHYKENMYTVKIDDED------YAIKPMNCPGGLIYYNSQLHSYRDFPMRV 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AE G V+R+E SG+L GLMRVR FTQDD+H+F   EQ+ +E   + NLI  IYK FGFE 
Sbjct: 355 AELGRVHRHELSGALQGLMRVRAFTQDDSHIFMLPEQIKDEIKGVANLIDGIYKTFGFE- 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             ++LSTRPE  +GS+  W+ AEN ++  L+ +       +   +  G+GAFYGPK ++ 
Sbjct: 414 YNLELSTRPENSMGSNEEWEAAENGLREALEELG------LPYTINEGDGAFYGPKIDFH 467

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LKD +GR WQCGTIQ+D  LP +F+  Y+    EK  PVMIHR  FGSIERFIGI+IE++
Sbjct: 468 LKDCLGRTWQCGTIQLDMQLPRQFDNTYIGQDGEKHRPVMIHRVAFGSIERFIGILIEHY 527

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P+WLSP Q  +  I+   ++YA E+   L    + +E D R E I +KIRE  ++K
Sbjct: 528 AGKFPVWLSPTQVKILPISDKFMDYANEVKKELFDKGIRVELDDRAEKIGFKIREAQLEK 587

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P ++I G+KE ++ ++ +R         + L + I  ++KE
Sbjct: 588 VPYMLIVGEKEVADNNVSVRSRDKGEIGSIKLDEFIASISKE 629


>gi|225387532|ref|ZP_03757296.1| hypothetical protein CLOSTASPAR_01285 [Clostridium asparagiforme
           DSM 15981]
 gi|225046368|gb|EEG56614.1| hypothetical protein CLOSTASPAR_01285 [Clostridium asparagiforme
           DSM 15981]
          Length = 584

 Score =  532 bits (1370), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 258/570 (45%), Positives = 376/570 (65%), Gaps = 20/570 (3%)

Query: 59  IEIITP-----EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQP 113
           ++II P     E    L  IRH+ +H++A+AV+ ++PE ++AIGP I+DGFYYDFD+E  
Sbjct: 1   MKIILPDGSVQEAEDELRAIRHTASHVLAQAVKRLYPETKLAIGPAIDDGFYYDFDREGG 60

Query: 114 FSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTL 173
           F+ ++L ++E +M +I+  + P     L  ++A +  E K E YKVE++E +P +E ++ 
Sbjct: 61  FTPEDLEKLEGEMMKIVKENLPVKPFVLPRDEAIKFMEEKGEPYKVELIEDLPDEETISF 120

Query: 174 YRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQ 233
           Y QGE+ DLC GPH+  T  VK F KL  +AGAYWRG     ML+RIYGTA+  + +L Q
Sbjct: 121 YTQGEFTDLCAGPHIMYTKGVKAF-KLTSIAGAYWRGSEKNKMLTRIYGTAFANKADLEQ 179

Query: 234 YLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYE 292
           YL  +EE++KRDHRKL +E+ LF  A++G G  F+  KG  +  TLI Y R   +++ Y+
Sbjct: 180 YLTMMEEAKKRDHRKLGKELGLFMFADEGPGFPFFLPKGMTLKNTLIDYWREIHLREGYQ 239

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E++TP +L + LW+ SGHWD Y+ NM+       T+ D   FA+KPMNCPG + V+ +  
Sbjct: 240 EVSTPIILSRKLWENSGHWDHYKDNMYT------TVIDEEDFAVKPMNCPGGMLVYKNTP 293

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
            SYRELP+R+ E G V+R+E SG LHGLMRVR FTQDDAH+F   +Q+ +E   +  LI 
Sbjct: 294 HSYRELPLRVGELGLVHRHEKSGQLHGLMRVRCFTQDDAHIFMRDDQIEDEIKGVTRLIN 353

Query: 413 SIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
            +Y  FGFE   V+LSTRPE  +GSD  W+ A N   G+   +++   D I   V  G+G
Sbjct: 354 EVYSQFGFE-YFVELSTRPEDSMGSDEDWEMATN---GLRKALEDMGLDYI---VNEGDG 406

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           AFYGPK ++ L+D++GR WQCGTIQ+DF +P RF+  Y      K  P+MIHR  FGSIE
Sbjct: 407 AFYGPKIDFHLRDSLGRTWQCGTIQLDFQMPQRFDLEYTAEDGNKKRPIMIHRVCFGSIE 466

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
           RFIGI+IE+F G  P+WL+P+Q  V  ++  +++YA  +   LK+  +  E D ++E + 
Sbjct: 467 RFIGILIEHFAGKFPVWLAPVQVKVIPVSEKSMDYATGVYEKLKAAGIRTELDHKDEKVG 526

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIR 622
           YKIR+  ++K+P +++ G+KEA+E +I +R
Sbjct: 527 YKIRQAQLEKVPFMLVLGEKEAAEGAITVR 556


>gi|251781963|ref|YP_002996265.1| threonyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|242390592|dbj|BAH81051.1| threonyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|323126789|gb|ADX24086.1| threonyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis ATCC 12394]
          Length = 647

 Score =  532 bits (1370), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 274/643 (42%), Positives = 411/643 (63%), Gaps = 23/643 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+TFPDG+++ F    T  ++AESIS+SLAKKA+A   NG++ D +  + E GSIEI+T
Sbjct: 2   IKITFPDGAVREFESGVTTFEIAESISKSLAKKALAGKFNGQLIDTTRAIEEDGSIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
           P+   +  V+RHS AH+ A+A + ++P + + +GP I +GFYYD D  +   S+++L +I
Sbjct: 62  PDHEDAYDVLRHSAAHLFAQAAKRLFPNLHLGVGPAIAEGFYYDTDNADGQISNEDLPRI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +MQ+I+  + P +++ ++ E+A ELF  K + YKVE++    A   +T+YRQGE+ DL
Sbjct: 122 EAEMQKIVKENYPCIREEVTKEEALELF--KDDPYKVELINE-HAGAGLTVYRQGEFVDL 178

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG+++  F L+ VAGAYWRG+S+  M+ R+YGTAW  +++L  YL  LEE++
Sbjct: 179 CRGPHVPSTGRIQ-VFHLLNVAGAYWRGNSDNNMMQRVYGTAWFDKKDLKAYLTRLEEAK 237

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVL 300
           +RDHRKL +E+DLF I+++ G G+ FW   G  I +TL  Y+  K +   Y+ + TP + 
Sbjct: 238 ERDHRKLGKELDLFMISQEVGQGLPFWLPDGATIRRTLERYITDKELASGYQHVYTPPLA 297

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
              L++ SGHW+ Y+ +MF V      + D   F L+PMNCP H+ V+ + + SYRELP+
Sbjct: 298 SVELYKTSGHWEHYQEDMFPVM----DMGDGEEFVLRPMNCPHHIQVYKNHVHSYRELPI 353

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G ++R E SG+L GL RVR  T +D H+F T EQ+ +E  +   LII +Y+DF  
Sbjct: 354 RIAELGMMHRYEKSGALSGLQRVREMTLNDGHIFVTPEQIRDEFKRTLQLIIDVYEDFNL 413

Query: 421 EKIMVKLSTR-PE---KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
                +LS R PE   K   +D +W++A+ ++KG +D +       ++     GE AFYG
Sbjct: 414 TDYRFRLSYRDPEDTHKYYDNDEMWENAQAMLKGAMDDMG------VDYFEAEGEAAFYG 467

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK +  +K A+G +    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF  
Sbjct: 468 PKLDIQVKTALGNEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMIHRGVISTMERFTA 527

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKI 595
           I+IE +KG  P WL+P Q  V  I++ A ++YA E+A  L+   +  + D RNE + YKI
Sbjct: 528 ILIETYKGAFPTWLAPHQVTVIPISNEAHIDYAWEVAKTLRDRGVRADVDDRNEKMQYKI 587

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           R     KIP  +I GDKE  E+S+ +RR+GS  T   S+ D +
Sbjct: 588 RASQTSKIPYQLIVGDKEMEEKSVNVRRYGSKATHTESVEDFV 630


>gi|15674621|ref|NP_268795.1| threonyl-tRNA synthetase [Streptococcus pyogenes M1 GAS]
 gi|71910240|ref|YP_281790.1| threonyl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
 gi|22654136|sp|Q9A115|SYT_STRP1 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|13621733|gb|AAK33516.1| putative threonyl-tRNA synthetase 1 [Streptococcus pyogenes M1 GAS]
 gi|71853022|gb|AAZ51045.1| threonyl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
          Length = 647

 Score =  532 bits (1370), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 274/639 (42%), Positives = 406/639 (63%), Gaps = 23/639 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+TFPDG+++ F    T  D+AESIS+SLAKKA+A   N ++ D +  + E GSIEI+T
Sbjct: 2   IKITFPDGAVREFESGVTTFDIAESISKSLAKKALAGKFNDQLIDTTRAIEEDGSIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
           P+   +  V+RHS AH+ A+A + ++P + + +GP I +GFYYD D  E   S+++L +I
Sbjct: 62  PDHKDAYEVLRHSAAHLFAQAAKRLFPNLHLGVGPAIAEGFYYDTDNAEGQISNEDLPRI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +MQ+I+  + P +++ ++ E+A ELF  K + YKVE++    A   +T+YRQGE+ DL
Sbjct: 122 EAEMQKIVTENYPCIREEVTKEEALELF--KDDPYKVELINE-HAGAGLTVYRQGEFVDL 178

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG+++  F L+ VAGAYWRG+S+  M+ RIYGTAW  +++L  YL  LEE++
Sbjct: 179 CRGPHVPSTGRIQ-VFHLLNVAGAYWRGNSDNNMMQRIYGTAWFDKKDLKAYLTRLEEAK 237

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVL 300
           +RDHRKL +E+DLF I+++ G G+ FW   G  I +TL  Y+  K +   Y+ + TP + 
Sbjct: 238 ERDHRKLGKELDLFMISQEVGQGLPFWLPDGATIRRTLERYITDKELASGYQHVYTPPLA 297

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
              L++ SGHWD Y+ +MF V      + D   F L+PMNCP H+ V+ + ++SYRELP+
Sbjct: 298 SVELYKTSGHWDHYQEDMFPVM----DMGDGEEFVLRPMNCPHHIQVYKNHVRSYRELPI 353

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G ++R E SG+L GL RVR  T +D H+F T EQ+  E  +   LII +Y DF  
Sbjct: 354 RIAELGMMHRYEKSGALSGLQRVREMTLNDGHIFVTPEQIQEEFQRALQLIIDVYADFNL 413

Query: 421 EKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
                +LS R      K   +D +W++A++++K  LD +       ++     GE AFYG
Sbjct: 414 TDYRFRLSYRDPNDTHKYYDNDEMWENAQSMLKAALDEMG------VDYFEAEGEAAFYG 467

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK +  +K A+G +    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF  
Sbjct: 468 PKLDIQVKTALGNEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMIHRGVISTMERFTA 527

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKI 595
           I+IE +KG  P WL+P Q  V  I++ A ++YA E+A  L+   +  + D RNE + YKI
Sbjct: 528 ILIETYKGAFPTWLAPHQVTVIPISNEAHIDYAWEVAKTLRDRGVRADVDDRNEKMQYKI 587

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           R     KIP  +I GDKE  ++S+ +RR+GS TT   S+
Sbjct: 588 RASQTSKIPYQLIVGDKEMEDKSVNVRRYGSKTTHTESV 626


>gi|237755902|ref|ZP_04584494.1| threonyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense SS-5]
 gi|237691927|gb|EEP60943.1| threonyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense SS-5]
          Length = 643

 Score =  532 bits (1370), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 271/636 (42%), Positives = 411/636 (64%), Gaps = 28/636 (4%)

Query: 6   KLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITP 64
           K TF +G         T  D+ ++++    K  V   +N ++ D+  P+ + G+++ +  
Sbjct: 12  KFTFNEG--------ITLKDILKNLNGKF-KDVVGGKLNSEIVDIHTPINQSGNLKFLKK 62

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPE--VQVAIGPIIEDGFYYDFDKEQPFSSDE-LAQ 121
           ED  SL ++RHS AHIMA+A++ I+ +  V + IGP  E GFYYD + E    +DE L Q
Sbjct: 63  EDKESLEILRHSLAHIMAQALKEIYGDENVHLGIGPTTEHGFYYDVEIEGKRLTDEDLPQ 122

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE-SIPAKENVTLYRQGEWF 180
           IE+KM+EII +     +  L  E+A + FE+KKE YK++I++ +IP  E ++LY+QG++ 
Sbjct: 123 IEEKMKEIIKKGYQIERFELPREEAIKFFENKKEIYKIDIIKHNIPEGEPISLYKQGDFV 182

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ ST +   F KL+ V+GAYWRG    PML RIYG A+ +++EL  YL  LEE
Sbjct: 183 DLCRGPHLPSTDKAGAF-KLIYVSGAYWRGKETNPMLQRIYGVAFWSEKELKDYLNMLEE 241

Query: 241 SEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTL-ISYMRRKIKDDYEEINTPQ 298
           ++KRDHRK+ ++++LF I E+ G G+  W  KG  I + +  ++ +  +K  Y+ + TP 
Sbjct: 242 AKKRDHRKIGKDLELFLIDEEIGGGLAIWLPKGAIIRKEIEDAWKKEHLKRGYQLVYTPH 301

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V  + LWQ SGH   Y+ NM+     ++       + +KPMNCP HV ++    +SY+EL
Sbjct: 302 VGKEQLWQTSGHLSLYQENMYPRMQIEE-----EGYYVKPMNCPFHVEIYKSKQRSYKEL 356

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAE G+VYR E SG+LHGLMRVRGFTQDDAH+ C ++Q+ +E  ++ NL ++  K +
Sbjct: 357 PIRLAELGTVYRYERSGALHGLMRVRGFTQDDAHIICREDQVEDEIREVLNLALNTLKSY 416

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF++  V LST+PEK VG D +W+ AEN ++  +++        ++  +  G GAFYGPK
Sbjct: 417 GFDEFEVYLSTKPEKYVGDDKMWEIAENSLRKAIESTG------LDYKIDEGGGAFYGPK 470

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +  +KDAIGR WQC TIQ DFNLP RF+ +Y+   ++K  P MIHRA+FGSIERFIG++
Sbjct: 471 IDVKIKDAIGRLWQCSTIQFDFNLPERFDMYYIGEDNQKHRPYMIHRAIFGSIERFIGVL 530

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           +E++ G LP+WLSP+Q  +  I    +EYA+ +   L  + + +E D RNE +N KIR+ 
Sbjct: 531 LEHYAGFLPVWLSPVQVKIIPIADKHLEYAETVKQKLLENDIRVELDDRNERMNKKIRDA 590

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
            ++KIP +++ GDKEA   ++ +R  G   +Q +S+
Sbjct: 591 ELQKIPFMLVVGDKEAETGTVAVREKGKQGSQTLSI 626


>gi|227537393|ref|ZP_03967442.1| threonine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300]
 gi|227242771|gb|EEI92786.1| threonine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300]
          Length = 641

 Score =  532 bits (1370), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 277/654 (42%), Positives = 410/654 (62%), Gaps = 31/654 (4%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           IK+T PDGS++ +    + + VA SIS  LA+  +A  +NG++ D S P+ ++ S++++T
Sbjct: 2   IKITLPDGSVREYEKGTSAAQVALSISEGLARNVLAAEVNGEIWDASRPIEQDSSLKLLT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQI 122
             D +  +   HS AH+MAEA+++++P V+  IGP IE GFYYD D  ++ FSSDE  QI
Sbjct: 62  WNDDKGKSTFWHSSAHLMAEALEALYPGVKFGIGPAIETGFYYDVDFGDREFSSDEFKQI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E KM E+  R   F ++ +S  +A + F  K + YK+++++ +     +T Y QG++ DL
Sbjct: 122 EDKMLELAKRKEVFERKAVSKAEALDYFTEKGDEYKLDLIKDL-EDGKITFYSQGDFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ +TG +K   KL  VAGAYWRGD +R  L+RIYG  +    ELT YL F+EE++
Sbjct: 181 CRGPHIPNTGFIKAI-KLTNVAGAYWRGDESRKQLTRIYGVTFPKASELTDYLKFIEEAK 239

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           KRDHRKL +E++LF  +E  G G+  W  KG  + Q LI +M+R ++K  YE + TP + 
Sbjct: 240 KRDHRKLGKELELFAFSEKVGMGLPLWLPKGAALRQKLIDFMQRAQLKAGYEPVVTPHIG 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT------FALKPMNCPGHVAVFNHGLKS 354
            + L+  SGH++ Y          +D+ + ++T      F LKPMNCP H  ++    +S
Sbjct: 300 HKQLYVTSGHYEKY---------GEDSFQPIKTPVEGEEFFLKPMNCPHHCEIYKTKPRS 350

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           Y++LPVR AEFG+VYR E SG LHGL RVRGFTQDDAH+FC  +Q+  E  K+ +L++ +
Sbjct: 351 YKDLPVRFAEFGTVYRYEQSGELHGLTRVRGFTQDDAHLFCRPDQVKEEFKKVIDLVLYV 410

Query: 415 YKDFGFEKIMVKLSTR-PEKR---VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
           +   GFE  + ++S R PE R   +GSD  W  AE  +      I+ + +  + T V  G
Sbjct: 411 FGALGFEDYIAQVSLRDPENRTKYIGSDENWVLAERAI------IEAADEKGLPTVVEYG 464

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           E AFYGPK ++++KDA+GR WQ GTIQVD+NLP RF   Y  S + K  PVMIHRA FGS
Sbjct: 465 EAAFYGPKLDFMVKDALGRKWQLGTIQVDYNLPERFELEYTGSDNAKHRPVMIHRAPFGS 524

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
           +ERFI ++IE+  G  PLWL+P Q IV  ++    EYAQ++   L +  +    D R+E 
Sbjct: 525 LERFIAVLIEHCAGRFPLWLAPEQFIVLPVSEKYEEYAQKLLESLNNSDIRGLIDLRDEK 584

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  KIR+  +KK+P ++I G+KEA   ++ +R+ GS     ++  +   +L KE
Sbjct: 585 VGRKIRDAEVKKLPYMLIVGEKEAESGTVSVRKHGSGDVGSMTPEEFREVLIKE 638


>gi|332523222|ref|ZP_08399474.1| threonine--tRNA ligase [Streptococcus porcinus str. Jelinkova 176]
 gi|332314486|gb|EGJ27471.1| threonine--tRNA ligase [Streptococcus porcinus str. Jelinkova 176]
          Length = 648

 Score =  532 bits (1370), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 274/640 (42%), Positives = 404/640 (63%), Gaps = 23/640 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+TFPDG+++ F    T  +VA+SIS SLAKKA+A   NG + D + P+ E GSIEI+T
Sbjct: 2   IKITFPDGAVREFESGITTFEVAQSISNSLAKKALAGKFNGHLVDTNRPLEEDGSIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQI 122
           P+   +  V+RHS AH+ A+A + ++P++ + +GP I DGFYYD D +    S+++L +I
Sbjct: 62  PDHEDAFDVLRHSAAHLFAQATKRLFPDIHLGVGPAIADGFYYDTDNQAGQISNEDLPRI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES-IPAKENVTLYRQGEWFD 181
           E++M++I+  + P +++ +S E+A E+F  K + YKVE++E        +T+YRQGE+ D
Sbjct: 122 EEEMKKIVKENHPCIREEVSKEEALEIF--KGDPYKVELIEEHSDDAAGLTIYRQGEFVD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++  F L+ VAGAYWRG+S+  M+ R+YGTAW  +++L  YL  LEE+
Sbjct: 180 LCRGPHVPSTGRIQ-VFHLLNVAGAYWRGNSDNAMMQRVYGTAWFDKKDLKAYLTRLEEA 238

Query: 242 EKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQV 299
           ++RDHRKL +E+DLF +  E G G+ FW   G  I +TL  Y+  K +   Y+ + TP +
Sbjct: 239 KERDHRKLGKELDLFMVNPEVGQGLPFWLPNGATIRRTLERYITDKELASGYQHVYTPPM 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
                ++ SGHWD YR +MF        + D   F L+PMNCP H+ V+ H + SYRELP
Sbjct: 299 ASVDFYKTSGHWDHYRDDMFPTM----DMGDGEEFVLRPMNCPHHIEVYKHHVHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  T +D H+F T EQ+  E  +   LII +Y+DF 
Sbjct: 355 IRIAELGMMHRYEKSGALSGLQRVREMTLNDGHLFVTPEQIQEEFQRALQLIIDVYEDFN 414

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R     EK   +D +W+ A++++K  LD +       ++     GE AFY
Sbjct: 415 LTDYRFRLSYRDPNDTEKYFDNDEMWEKAQSMLKAALDEMG------VDYFEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G +    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF 
Sbjct: 469 GPKLDIQVKTALGNEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMIHRGVISTMERFT 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IE +KG  P WL+P Q  V  I++ A V+YA E+A +L+   +  + D RNE + YK
Sbjct: 529 AILIETYKGAFPTWLAPHQVTVIPISNEAHVDYAWEVAKILRDKGVRADVDERNEKMQYK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           IR     KIP  +I GDKE  E+S+ +RR+GS  T   ++
Sbjct: 589 IRASQTSKIPYQLIVGDKEMEEKSVNVRRYGSKATHTETI 628


>gi|226226691|ref|YP_002760797.1| threonyl-tRNA synthetase [Gemmatimonas aurantiaca T-27]
 gi|226089882|dbj|BAH38327.1| threonyl-tRNA synthetase [Gemmatimonas aurantiaca T-27]
          Length = 660

 Score =  531 bits (1369), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 274/643 (42%), Positives = 400/643 (62%), Gaps = 18/643 (2%)

Query: 1   MPSD---IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE- 56
           MP+D   I LT PDGS +  P      DV  SI   L + +VAVA++G+V DL  P+R+ 
Sbjct: 1   MPADNALIVLTLPDGSTREVPTGTLARDVVGSIGTRLLQASVAVAVDGEVQDLMTPLRKS 60

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSS 116
           G+  +IT +DPR+LAV+RHS AHI+A AV+ + P+ ++  GP I+DGFYYDF+ E+PF+ 
Sbjct: 61  GAFVVITDKDPRALAVLRHSGAHILATAVRRLRPDAKIGFGPAIDDGFYYDFEVEKPFTP 120

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENV-TLYR 175
           ++LA  E +M+++ A   PF++  +S E+A+ LF    +  K+E L      + V + Y 
Sbjct: 121 EDLAAFEAEMKKVAAEKYPFVRAEVSVEEAKGLFVD--DPLKLERLADFEGTDEVISTYT 178

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
            G + DLCRGPHV  T  +K F KL+  AGAYWRGD  R ML RIY TA+  + EL Q+L
Sbjct: 179 DGPFIDLCRGPHVPDTSHLKHF-KLLHTAGAYWRGDVKRQMLQRIYATAFFKKDELEQHL 237

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEIN 295
           + LEE++KRDHR L + + LF I     G  FW  KG  ++ TL  ++R + ++ ++EI 
Sbjct: 238 HNLEEAKKRDHRVLGKALGLFQIFPQAPGAAFWTPKGTTLYNTLEGFVRERQQEAFQEIK 297

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP + ++ LW+QSGHW  Y+ NMF V   +    D+   +LKPMNCP H  +F     SY
Sbjct: 298 TPLLYNKKLWEQSGHWGKYKENMFLVLDNETGEHDM---SLKPMNCPSHHVLFASEKHSY 354

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           R++PVR   F  ++RNE SG+L GL RVR F+QDD HV+  ++Q+ +E   + + I+S Y
Sbjct: 355 RQMPVRFVTFDVLHRNELSGALSGLTRVRQFSQDDCHVYLREDQIESEVKFLMDFILSYY 414

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
             FG  K  +K +TRPE+R+GSD LWD AE  +K  L++   S + +       G+GAFY
Sbjct: 415 DTFGL-KANLKFATRPEQRIGSDELWDRAEAALKAALESTGRSYEMK------EGDGAFY 467

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++ + D+IGR WQ GTIQ+D+N P RF   Y    +    PV+IHRAV GS ERFI
Sbjct: 468 GPKIDFDVTDSIGRAWQLGTIQLDYNAPERFELAYTGEDNAPHRPVVIHRAVSGSFERFI 527

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            I+IE+F G  P+WL+P Q  V  I      + Q + + +K+  +    D RNET+NY++
Sbjct: 528 AILIEHFAGAFPVWLAPEQVRVIPIAIDFNAHGQALVDRMKAAGIRATLDARNETLNYRV 587

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           RE  ++K+P + + G +E+ E ++ +R  G+   Q++   DA 
Sbjct: 588 REGEVEKVPYMCVIGRRESEENTVALRTRGAGKKQEILSADAF 630


>gi|21909901|ref|NP_664169.1| threonyl-tRNA synthetase [Streptococcus pyogenes MGAS315]
 gi|28896400|ref|NP_802750.1| threonyl-tRNA synthetase [Streptococcus pyogenes SSI-1]
 gi|25453285|sp|Q8K8C0|SYT_STRP3 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|21904088|gb|AAM78972.1| putative threonyl-tRNA synthetase [Streptococcus pyogenes MGAS315]
 gi|28811651|dbj|BAC64583.1| putative threonyl-tRNA synthetase 1 [Streptococcus pyogenes SSI-1]
          Length = 647

 Score =  531 bits (1368), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 274/639 (42%), Positives = 405/639 (63%), Gaps = 23/639 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+TFPDG+++ F    T  D+AESIS+SLAKKA+A   N ++ D +  + E GSIEI+T
Sbjct: 2   IKITFPDGAVREFESGVTTFDIAESISKSLAKKALAGKFNDQLIDTTRAIEEDGSIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
           P+   +  V+RHS AH+ A+A + ++P + + +GP I +GFYYD D  E   S+++L +I
Sbjct: 62  PDHKDAYEVLRHSAAHLFAQAAKRLFPNLHLGVGPAIAEGFYYDTDNTEGQISNEDLPRI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +MQ+I+  + P +++ ++ E+A ELF  K + YKVE++    A   +T+YRQGE+ DL
Sbjct: 122 EAEMQKIVTENYPCIREEVTKEEALELF--KDDPYKVELINE-HAGAGLTVYRQGEFVDL 178

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG+++  F L+ VAGAYWRG+S+  M+ RIYGTAW  +++L  YL  LEE++
Sbjct: 179 CRGPHVPSTGRIQ-VFHLLNVAGAYWRGNSDNNMMQRIYGTAWFDKKDLKAYLTRLEEAK 237

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVL 300
           +RDHRKL +E+DLF I+++ G G+ FW   G  I +TL  Y+  K +   Y+ + TP + 
Sbjct: 238 ERDHRKLGKELDLFMISQEVGQGLPFWLPDGATIRRTLERYITDKELASGYQHVYTPPLA 297

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
              L++ SGHWD Y+ +MF V      + D   F L+PMNCP H+ V+ + ++SYRELP+
Sbjct: 298 SVELYKTSGHWDHYQEDMFPVM----DMGDGEEFVLRPMNCPHHIQVYKNHVRSYRELPI 353

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G ++R E SG+L GL RVR  T +D H+F T EQ+  E  +   LII +Y DF  
Sbjct: 354 RIAELGMMHRYEKSGALSGLQRVREMTLNDGHIFVTPEQIQEEFQRALQLIIDVYADFNL 413

Query: 421 EKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
                +LS R      K   +D +W++A++++K  LD +       ++     GE AFYG
Sbjct: 414 TDYRFRLSYRDPNDTHKYYDNDEMWENAQSMLKAALDEMG------VDYFEAEGEAAFYG 467

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK +  +K A+G +    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF  
Sbjct: 468 PKLDIQVKTALGNEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMIHRGVISTMERFTA 527

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKI 595
           I+IE +KG  P WL+P Q  V  I++ A ++YA E+A  L+   +  + D RNE + YKI
Sbjct: 528 ILIETYKGAFPTWLAPHQVTVIPISNEAHIDYAWEVAKTLRDRGVRADVDDRNEKMQYKI 587

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           R     KIP  +I GDKE  E+S+ +RR+GS  T   S+
Sbjct: 588 RASQTSKIPYQLIVGDKEMEEKSVNVRRYGSKATHTESV 626


>gi|307244344|ref|ZP_07526458.1| threonine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
 gi|306492310|gb|EFM64349.1| threonine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
          Length = 664

 Score =  531 bits (1368), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 263/642 (40%), Positives = 404/642 (62%), Gaps = 16/642 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K+   DG+       A+  DVA+ IS   A+  +  A++GK+  L+  + ++  ++   
Sbjct: 25  LKIELRDGNFVEVENGASLLDVAKGISDGFARSVLVGAVDGKLESLNKKLDKDCKVDFYK 84

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            ED     V RH+ AHI A+AV+ +WP+ ++AIGP IE+GFYYDFD +     ++L +IE
Sbjct: 85  FEDAEGKEVFRHTSAHIFAQAVKRLWPQAKLAIGPAIENGFYYDFDLDYRLVPEDLEKIE 144

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M++I+  D       +S E+A ++     E YKVE++  +P  E +++YRQGE+ DLC
Sbjct: 145 AEMKKIVKEDLRIEGFEVSKEEAIKMMAEIGEDYKVEMINDLPDGEIISMYRQGEFVDLC 204

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ ST ++K F KL  +AGAYWRGD N  ML R+YGT++  +++L  +L+ LEE++K
Sbjct: 205 RGPHLESTKKIKAF-KLQSIAGAYWRGDENNKMLQRVYGTSFEKKKDLDAHLFMLEEAKK 263

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRK+ +E+ LF I ++G G   +  +G  +   L+ Y     ++  Y EI TP +L++
Sbjct: 264 RDHRKIGKELGLFMIPDEGPGFPLFLPRGTALKAALMKYWEEVHREAHYVEIETPIILNR 323

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW  Y+ NM+ V+       D   +A+KPMNCPG +  +   L SYR+ P+R+
Sbjct: 324 KLWETSGHWFHYKENMYTVQI------DEEDYAIKPMNCPGAMLFYKSQLHSYRDFPMRV 377

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            E G V+R+E SG+LHGLMRVR FTQDDAH++C  +Q+ +E  ++ NLI  +YK FGF  
Sbjct: 378 GERGRVHRHELSGALHGLMRVRAFTQDDAHIYCLPDQIRSEVKEVINLIDKVYKQFGF-S 436

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +G+D  W  AE+ ++G L+ +    + R+N G    +GAFYGPK ++ 
Sbjct: 437 YHVELSTRPEDSMGTDEEWAIAEDGLRGALEEM--GMEYRVNEG----DGAFYGPKIDFH 490

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LKD +GR WQCGT Q+D  LP RF+A YV    EK  PVM+HR   GSIERFIGI+IEN+
Sbjct: 491 LKDCLGRTWQCGTCQLDMQLPQRFDATYVGKDGEKHRPVMLHRVALGSIERFIGILIENY 550

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P+WL+P Q  V +++    ++A+E+ + L    + +E D+R E + +KIRE  ++K
Sbjct: 551 AGKFPVWLAPCQVKVLSVSDKYNDFAKELQDKLFDAGIRVELDYRAEKVGFKIREAQLEK 610

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IP +++ G+KE     + +R        ++S+ D +  + K+
Sbjct: 611 IPYMLVVGEKEMESCLLSVRSRDEGELGQMSVEDFLAKINKQ 652


>gi|332201058|gb|EGJ15129.1| threonyl-tRNA synthetase [Streptococcus pneumoniae GA47901]
          Length = 647

 Score =  531 bits (1368), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 267/640 (41%), Positives = 407/640 (63%), Gaps = 23/640 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           I +TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  + E GSIEI+T
Sbjct: 2   INITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGSIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQI 122
           P+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D      S+++L +I
Sbjct: 62  PDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNTAGQISNEDLPRI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWFD 181
           E++MQ+I+  + P +++ ++ ++ARE+F  K + YK+E++E     E  +T+YRQGE+ D
Sbjct: 122 EEEMQKIVKENFPSIREEVTKDEAREIF--KNDPYKLELIEEHSEDEGGLTIYRQGEYVD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++  F L+ VAGAYWRG+S+  M+ RIYGTAW  +++L  YL   EE+
Sbjct: 180 LCRGPHVPSTGRIQ-IFHLLHVAGAYWRGNSDNAMMQRIYGTAWFDKKDLKNYLQMREEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+++ G G+ FW   G  I + L  Y+  +++   Y+ + TP +
Sbjct: 239 KERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVNKELASGYQHVYTPPL 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHWD Y+ +MF        + D   F L+PMNCP H+ VF H + SYRELP
Sbjct: 299 ASVELYKTSGHWDHYQEDMFPTM----DMGDGEEFVLRPMNCPHHIQVFKHHVHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y+DF 
Sbjct: 355 IRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYEDFN 414

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R      K   +D +W++A+ +++  LD +       ++     GE AFY
Sbjct: 415 LTDYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G++    TIQ+DF LP RF+  Y+ + SE   PVMIHR V  ++ERF 
Sbjct: 469 GPKLDIQIKTALGKEETLSTIQLDFLLPERFDLKYIGADSEDHRPVMIHRGVISTMERFT 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IEN+KG  P WL+P Q  +  +++   V+YA E+A  L+   +  + D RNE + +K
Sbjct: 529 AILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAKKLRDRGVRADVDERNEKMQFK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           IR     KIP  +I GDKE  + ++ +RR+G   TQ VS+
Sbjct: 589 IRASQTSKIPYQLIVGDKEMEDETVNVRRYGQKETQTVSV 628


>gi|306825714|ref|ZP_07459053.1| threonine--tRNA ligase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|304432075|gb|EFM35052.1| threonine--tRNA ligase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
          Length = 647

 Score =  531 bits (1368), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 270/640 (42%), Positives = 409/640 (63%), Gaps = 23/640 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  + E GSIEI+T
Sbjct: 2   IKITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGSIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQI 122
           P+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D      S+++L +I
Sbjct: 62  PDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNTAGQISNEDLPRI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWFD 181
           E++M++I+  + P +++ ++ ++ARE+F  K + YK+E++E     E  +T+YRQGE+ D
Sbjct: 122 EEEMKKIVKENFPSIREEVTKDEAREIF--KNDPYKLELIEEHSEDEGGLTIYRQGEYVD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++  F L+ VAGAYWRG+S+  M+ RIYGTAW  +++L  YL   EE+
Sbjct: 180 LCRGPHVPSTGRIQ-IFHLLNVAGAYWRGNSDNAMMQRIYGTAWFDKKDLKNYLQMREEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+++ G G+ FW   G  I + L  Y+  ++I   Y+ + TP +
Sbjct: 239 KERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVDKEIAAGYQHVYTPPI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHWD YR +MF        + D   F L+PMNCP H+ V+ H + SYRELP
Sbjct: 299 ASVELYKTSGHWDHYREDMFPTM----DMGDGEEFVLRPMNCPHHIEVYKHHVHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  + +D H F   EQ+  E  KI  LII +Y+DF 
Sbjct: 355 IRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHTFVAPEQIEEEFKKILQLIIDVYEDFN 414

Query: 420 FEKIMVKLSTR-PE---KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R PE   K   +D +W++A+ ++K  +D ++      ++     GE AFY
Sbjct: 415 LTDYRFRLSYRDPEDKHKYFDNDEMWENAQRMLKAAMDDME------LDYFEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G++    TIQ+DF LP RF+  YV +  E+  PVMIHR V  ++ERF 
Sbjct: 469 GPKLDIQVKTALGKEETLSTIQLDFLLPERFDLKYVGADGEEHRPVMIHRGVISTMERFT 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IEN+KG  P WL+P Q  +  +++   V+YA E+A  L+   +  + D RNE + +K
Sbjct: 529 AILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAKKLRDRGVRADVDERNEKMQFK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           IR     KIP  +I GDKE  + ++ +RR+G   TQ V +
Sbjct: 589 IRASQTSKIPYQLIVGDKEMEDGTVNVRRYGQKETQTVPV 628


>gi|153004735|ref|YP_001379060.1| threonyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
 gi|152028308|gb|ABS26076.1| threonyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
          Length = 681

 Score =  531 bits (1367), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 280/660 (42%), Positives = 395/660 (59%), Gaps = 20/660 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSD-VAESISRSLAKKAVAVAINGKVCDLSDPV-REGS 58
           M   +K+T PDGS K      T  D V  +I   LAK A    ++G+  DLS P+ R+  
Sbjct: 29  MSDLVKVTLPDGSQKEAARGTTVLDFVKTAIGPGLAKAAYFAKLDGEPVDLSRPLDRDAK 88

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           +E++T + P +L V RH  AH+MA  VQ ++P  QV IGP IEDGFYYDF +E PF+ ++
Sbjct: 89  LEVVTTKSPEALEVARHDAAHVMASVVQKLYPGTQVTIGPAIEDGFYYDFARETPFTPED 148

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK--ENVTLYRQ 176
           L +IEK   E IA D PF++  +S + A  LFE   E YKVEI++ I A+  + +TLYR 
Sbjct: 149 LEKIEKATNEAIAADLPFVRDEISMDAALGLFEGLGEKYKVEIVKDIAARGAKTLTLYRH 208

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           G+W D C GPH  ST ++    KL+ VAGAYWRGDS   ML RIYGTA+  ++EL  +L 
Sbjct: 209 GDWVDFCLGPHGPSTKRIG-VVKLLSVAGAYWRGDSRNAMLQRIYGTAFFDKKELEAHLA 267

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEIN 295
            +EE  KRDHRKL   + LF   E   G  FW   G  ++  L   MRR + K  Y+E+ 
Sbjct: 268 RMEEVRKRDHRKLGPALGLFAFHEVAPGAAFWLPNGTTLYNVLEDAMRRLVSKGGYQEVK 327

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAV--KCADDT--IKDLRTFALKPMNCPGHVAVFNHG 351
           TP + ++ LW+QSGHW  YR NMF V  K +D    + +  + +LKPMNCP H  ++  G
Sbjct: 328 TPLLFNKRLWEQSGHWGVYRENMFLVFDKESDPALPVDERLSMSLKPMNCPSHHLIYKMG 387

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI 411
            +SYR+LP+R     +++RNE SGSL GL RVR F QDDAH++  + Q+  E  +I  L+
Sbjct: 388 KRSYRDLPIRYFTVDTLHRNELSGSLGGLTRVRQFAQDDAHLYLMESQIPEEVSRIVELM 447

Query: 412 ISIYKDFGFEKIMVKLSTRP---EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
            ++Y  FG E  ++  STRP   E R+G DALWD AE  ++  LD I    Q  +N G  
Sbjct: 448 KTVYGAFGLEFSLL-FSTRPVKPEDRIGDDALWDKAEGALRAALDRIGLPWQ--LNPG-- 502

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
             +GAFYGPK ++++ D++GR WQ  TIQ+D+  P RF+  YV   + +  PV+IHRAV+
Sbjct: 503 --DGAFYGPKIDFVVTDSLGRKWQTCTIQLDYAAPERFDLTYVGDDNHEHRPVVIHRAVY 560

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRN 588
           GS ERFI I+ E++ G  P WL+P+QA V T++     +A+E+   L +    +E D  +
Sbjct: 561 GSFERFIAILTEHYAGAFPAWLAPVQARVVTVSDRFEGWAREVQAKLATAGWRVELDESS 620

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
           + +  KIR   + KIP  ++ G+KE   + +  RR G    + + L     +L +E  PP
Sbjct: 621 DKLGAKIRNAQLAKIPFALVIGEKEVEAQGVAPRRHGGEDLKTMPLDAFEALLRREGTPP 680


>gi|327398462|ref|YP_004339331.1| threonyl-tRNA synthetase [Hippea maritima DSM 10411]
 gi|327181091|gb|AEA33272.1| threonyl-tRNA synthetase [Hippea maritima DSM 10411]
          Length = 620

 Score =  531 bits (1367), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 270/606 (44%), Positives = 402/606 (66%), Gaps = 22/606 (3%)

Query: 23  GSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIRHSCAHIM 81
           G+++ E + ++  K  +A  I GKV DL   +  + +IE IT      L ++RHS AHIM
Sbjct: 6   GTNLLEYVKKNKLKDIIAAKIEGKVVDLDTTLDSDKNIEFITINSKEGLEILRHSAAHIM 65

Query: 82  AEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYL 141
           A+AVQ ++ E + AIGP IE+GFYYD D  +  + D+L +IEK+M++I+  +  F ++ L
Sbjct: 66  AQAVQHVFGEAKFAIGPAIENGFYYDMDVGRTITDDDLKKIEKEMKKIVGANYKFSRKEL 125

Query: 142 SHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLM 201
             E+A ++F+ K + YKVEIL+ +  ++ V+LY QG++ DLCRGPH+ STG +K F KL+
Sbjct: 126 PKEEAVKIFQDKGDEYKVEILKDLD-EDVVSLYTQGDFTDLCRGPHIPSTGYLKHF-KLL 183

Query: 202 KVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED 261
            VAGAY++GD  RPML RIYG A+ T++EL +YL FLEE +KRDHRKL +++DLF I ++
Sbjct: 184 NVAGAYFKGDEARPMLQRIYGAAFATKEELDRYLKFLEEVKKRDHRKLGKQLDLFSINDE 243

Query: 262 -GSGVIFWHRKGWKIFQTLISYMRRK--IKDDYEEINTPQVLDQHLWQQSGHWDSYRANM 318
            G G+I WH KG  + + LI    RK  +K  YE +  P++L   LW++SGH+D YR NM
Sbjct: 244 VGPGLIIWHPKG-AMLRYLIEEFERKEHLKRGYEFVKGPEILRTQLWKRSGHFDHYRENM 302

Query: 319 FAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLH 378
           +  +  D      ++F +KPMNC GH+ V+    +SYRELP R  E G V+R+E SG LH
Sbjct: 303 YFTEIDD------QSFGIKPMNCLGHIQVYKSKKRSYRELPKRYFELGVVHRHEKSGVLH 356

Query: 379 GLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD 438
           GL+RVR FTQDDAH+FC  +Q+ +E + + N +  +   FGFE   +++STRPE  +G+D
Sbjct: 357 GLLRVREFTQDDAHIFCRPDQLNDEIIGVLNFVQDVMDIFGFE-YELEISTRPENSIGTD 415

Query: 439 ALWDDAENIMKGVLDTIKNSSQD-RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ 497
             W+ A N    +++ +KN+ ++  IN G    +GAFYGPK +  LKDA+GR WQC TIQ
Sbjct: 416 QQWELATN---ALINALKNTGREYDINEG----DGAFYGPKIDVKLKDALGRKWQCATIQ 468

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIV 557
            DF LP RF+  YV+   ++  PVM+HR + GSIERFI I+IEN++G+ P+W++P+Q  V
Sbjct: 469 CDFTLPERFDLTYVDEDGKEKQPVMVHRVILGSIERFIAILIENYEGDFPVWIAPVQVRV 528

Query: 558 TTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASER 617
             ++     YA+++   LK   + +E + RNET+  KIR     K+P +++ GDKE  ++
Sbjct: 529 LPVSEKHEAYAKDVYQTLKDRGIRVEIEERNETLGKKIRFAETDKVPYVVVVGDKEIEDK 588

Query: 618 SIGIRR 623
           +I +R+
Sbjct: 589 TISVRK 594


>gi|270293200|ref|ZP_06199411.1| threonine--tRNA ligase [Streptococcus sp. M143]
 gi|270279179|gb|EFA25025.1| threonine--tRNA ligase [Streptococcus sp. M143]
          Length = 647

 Score =  531 bits (1367), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 267/640 (41%), Positives = 408/640 (63%), Gaps = 23/640 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  + E GSIEI+T
Sbjct: 2   IKITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGSIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQI 122
           P+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D +    S+++L +I
Sbjct: 62  PDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNQAGQISNEDLPRI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWFD 181
           E++MQ+I+  + P +++ ++ ++ARE+F  K + YK+E++E     E  +T+YRQGE+ D
Sbjct: 122 EEEMQKIVKENFPSIREEVTKDEAREIF--KNDPYKLELIEEHSEDEGGLTIYRQGEYVD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++  F L+ VAGAYWRG+S+  M+ RIYGTAW  +++L  YL   EE+
Sbjct: 180 LCRGPHVPSTGRIQ-IFHLLHVAGAYWRGNSDNAMMQRIYGTAWFDKKDLKNYLQMREEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+++ G G+ FW   G  I + L  Y+  ++I   Y+ + TP +
Sbjct: 239 KERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVDKEIAAGYQHVYTPPI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHWD YR +MF        + D   F L+PMNCP H+ VF H + SYRELP
Sbjct: 299 ASVELYKTSGHWDHYREDMFPTM----DMGDGEEFVLRPMNCPHHIQVFKHHVHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y+DF 
Sbjct: 355 IRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYEDFN 414

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
             +   +LS R      K   +D +W++A+ +++  LD +       ++     GE AFY
Sbjct: 415 LTEYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G++    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF 
Sbjct: 469 GPKLDIQVKTALGKEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMIHRGVISTMERFT 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IEN+KG  P WL+P Q  +  +++   V+YA E+A  L+   +  + D RNE + +K
Sbjct: 529 AILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAKKLRDRGVRADVDERNEKMQFK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           IR     KIP  +I GDKE  + ++ +RR+G   T  V +
Sbjct: 589 IRASQTSKIPYQLIVGDKEMEDGTVNVRRYGQKETNTVPV 628


>gi|307702092|ref|ZP_07639099.1| threonyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
 gi|307707425|ref|ZP_07643907.1| threonyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
 gi|307616377|gb|EFN95568.1| threonyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
 gi|307616579|gb|EFN95769.1| threonyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
          Length = 647

 Score =  531 bits (1367), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 267/644 (41%), Positives = 410/644 (63%), Gaps = 23/644 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           I +TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  + E GSIEI+T
Sbjct: 2   INITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGSIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQI 122
           P+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D      S+++L +I
Sbjct: 62  PDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNTAGQISNEDLPRI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWFD 181
           E++MQ+I+  + P +++ ++ ++ARE+F  K + YK+E++E     E  +T+YRQGE+ D
Sbjct: 122 EEEMQKIVKENFPSIREEVTKDEAREIF--KNDPYKLELIEEHSEDEGGLTIYRQGEYVD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++  F L+ VAGAYWRG+S+  M+ RIYGTAW  +++L  YL   EE+
Sbjct: 180 LCRGPHVPSTGRIQ-IFHLLNVAGAYWRGNSDNAMMQRIYGTAWFDKKDLKSYLQMREEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+++ G G+ FW   G  I + L  Y+  +++   Y+ + TP +
Sbjct: 239 KERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVDKELASGYQHVYTPPL 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHWD Y+ +MF        + D   F L+PMNCP H+ VF H + SYRELP
Sbjct: 299 ASVELYKTSGHWDHYQEDMFPTM----DMGDGEEFVLRPMNCPHHIQVFKHHVHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y+DF 
Sbjct: 355 IRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYEDFN 414

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
             +   +LS R      K   +D +W++A+ +++  LD +       ++     GE AFY
Sbjct: 415 LTEYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G++    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF 
Sbjct: 469 GPKLDIQVKTALGKEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMIHRGVISTMERFT 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IEN+KG  P WL+P Q  +  +++   V+YA E+A  L+   +  + D RNE + +K
Sbjct: 529 AILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAKKLRDRGVRADVDERNEKMQFK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           IR     KIP  +I GDKE  + ++ +RR+G   TQ VS+ D +
Sbjct: 589 IRASQTSKIPYQLIVGDKEMEDGTVNVRRYGQKETQTVSVDDFV 632


>gi|126651397|ref|ZP_01723604.1| threonyl-tRNA synthetase [Bacillus sp. B14905]
 gi|126591926|gb|EAZ86009.1| threonyl-tRNA synthetase [Bacillus sp. B14905]
          Length = 643

 Score =  531 bits (1367), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 264/642 (41%), Positives = 410/642 (63%), Gaps = 20/642 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSI 59
           M   IKLTFPDG++K F    +  DVA SIS  L KKA A  ING + DL  P+ E  +I
Sbjct: 1   MSEMIKLTFPDGAVKEFVKGTSTDDVALSISPGLRKKAYAGKINGVLVDLKTPIEEDAAI 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D  +L ++RHS AH+ A+A++ ++P+V++ IGP+I+ GFYYD D   P ++++L
Sbjct: 61  AIITQDDAEALEILRHSTAHLTAQAIKRLFPDVKLGIGPVIDGGFYYDIDSPTPITAEDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEK+M++IIA +    ++ +S  +A+ ++E   + YK+E+LE+IPA E V++Y QGE+
Sbjct: 121 PAIEKEMKKIIAENLEVERKNVSRAEAQAMYEKIGDEYKLELLEAIPADEQVSIYYQGEF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRG HV STG++++ FKL+ +AGAYWRG+S+  ML RIYGTA+  ++EL  +L  LE
Sbjct: 181 FDLCRGIHVPSTGKLRE-FKLLSLAGAYWRGNSDNKMLQRIYGTAFFKKEELKHHLQMLE 239

Query: 240 ESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTP 297
           E+++RDHRK+ +E++LF  ++  G G+  W   G  I + +  Y+  +++   Y+ + TP
Sbjct: 240 EAKERDHRKIGKELELFTTSQKVGQGLPLWLPNGATIRRVIERYIVDKELSLGYKHVYTP 299

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +  + L+Q SGHWD Y+ ++F     D+      T  ++PMNCP H+ V+ + + SYR 
Sbjct: 300 VLGSKELYQTSGHWDHYQDSIFPPMEMDN-----ETLIMRPMNCPHHMMVYKNSMHSYRS 354

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AE G+++R E SG++ GL RVRG T +DAH+F   +Q+  E  K+  LI+ +YKD
Sbjct: 355 LPLRIAELGTMHRYEMSGAVSGLQRVRGMTLNDAHIFVRPDQIKAEFQKVVQLILEVYKD 414

Query: 418 FGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           F       +LS R     EK    DA+W+ A++++K  +D +       ++     GE A
Sbjct: 415 FDLNDYSFRLSYRDPADTEKYFNDDAMWEKAQSMLKEAMDELG------LDYFEAEGEAA 468

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  +K AIG++    T+Q+DF LP RF+  YV    +   PV+IHR V  ++ER
Sbjct: 469 FYGPKLDVQVKTAIGKEETLSTVQLDFLLPERFDLSYVGEDGKPHRPVVIHRGVVSTMER 528

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETIN 592
           F+  +IE +KG  P WL+P+Q  V  +++ A  +YA++I   L +  L +E D R E + 
Sbjct: 529 FVAFLIEEYKGAFPTWLAPVQVEVIPVSNEAHFDYAKQIEEQLTAAGLRVEMDDREEKLG 588

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           YKIRE  +KKIP +++ GDKE     + +RR+GS  ++ +S 
Sbjct: 589 YKIREAQMKKIPYMLVIGDKEVEASGVNVRRYGSKDSETISF 630


>gi|255531804|ref|YP_003092176.1| threonyl-tRNA synthetase [Pedobacter heparinus DSM 2366]
 gi|255344788|gb|ACU04114.1| threonyl-tRNA synthetase [Pedobacter heparinus DSM 2366]
          Length = 641

 Score =  531 bits (1367), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 277/648 (42%), Positives = 408/648 (62%), Gaps = 19/648 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           I +T PDGS + +    T   +A SIS  LA+  +A  +NG+V D S P+  + +++++T
Sbjct: 2   INITLPDGSSRQYEKGTTAHQIALSISEGLARNVLAAEVNGEVWDSSRPIEGDATVKLLT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQI 122
             D    A   HS AHIMAEA+++++P  +  IGP IE GFYYD D  ++ FSSD+  +I
Sbjct: 62  WNDQAGKATFWHSSAHIMAEALEALYPGTKFGIGPAIETGFYYDVDFGDREFSSDDFKEI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E K+ E+  +   F ++ +S   A + FE K + YK+++LE +     +T Y QGE+ DL
Sbjct: 122 EAKILELARQKEVFERKAVSKADAIKYFEEKGDEYKLDLLEGL-QDGKITFYTQGEFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ +TG VK   KLM VAGAYWRGD  R  L+RIYG  +    ELT+YL+ +EE++
Sbjct: 181 CRGPHIPNTGFVKAV-KLMNVAGAYWRGDETRKQLTRIYGVTFPKASELTEYLHMIEEAK 239

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           KRDHRKL +E++LF  +E  G G+  W  KG  + + L+ ++ R + K  YE++ TP + 
Sbjct: 240 KRDHRKLGKELELFAFSEKVGMGLPLWLPKGAALRERLVQFLTRAQAKAGYEQVVTPHIG 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            ++L+  SGH++ Y  + F       T ++   F LKPMNCP H  ++    +SY++LP+
Sbjct: 300 HKNLYITSGHYEKYGKDAFQ---PIKTPQEGEEFFLKPMNCPHHCEIYKTKPRSYKDLPL 356

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R AEFG+VYR E SG LHGL RVRGFTQDDAH+FC  +Q+  E  K+ +L++ ++K  GF
Sbjct: 357 RFAEFGTVYRYEQSGELHGLTRVRGFTQDDAHLFCRPDQVKEEFKKVIDLVLYVFKSLGF 416

Query: 421 EKIMVKLSTR-PE---KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           +    ++S R PE   K +GSD  W  AE  +      I+ + +  + T V  GE AFYG
Sbjct: 417 DDYTAQVSLRDPENKAKYIGSDENWRLAETAI------IEAADEKGLPTVVEYGEAAFYG 470

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK ++++KDA+GR WQ GTIQVD+NLP RF   Y  S ++K  PVMIHRA FGS+ERFI 
Sbjct: 471 PKLDFMVKDALGRKWQLGTIQVDYNLPERFELEYTGSDNQKHRPVMIHRAPFGSLERFIA 530

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           ++IE+  GN PLWLSP Q I+  I+    +YA+++++ L +  +    DFR+E I  KIR
Sbjct: 531 VLIEHCAGNFPLWLSPEQFIILPISEKYEDYAKKVSDELNNSDIRGLIDFRDEKIGRKIR 590

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  +KKIP ++I G+KE +E    +R+ G     +++L +   +L KE
Sbjct: 591 DAEVKKIPYMLIIGEKEMAEGKASVRKHGEGDLGEMTLQEFSELLIKE 638


>gi|194017082|ref|ZP_03055694.1| threonyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
 gi|194010950|gb|EDW20520.1| threonyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
          Length = 646

 Score =  531 bits (1367), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 266/645 (41%), Positives = 417/645 (64%), Gaps = 23/645 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSI 59
           M   I+LTFPDG++K F   AT  D+A SIS  L KKA+A  +NGK  DL  P+ E G+I
Sbjct: 1   MSEQIQLTFPDGAVKEFDKTATTEDIAASISPGLKKKALAGKLNGKEIDLRTPLLESGTI 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE---VQVAIGPIIEDGFYYDFDKEQPFSS 116
           EIIT +   +L ++RHS AH++A+A++ ++ +   VQ  +GP+IE+GFYYD D +   + 
Sbjct: 61  EIITDKSDEALDIMRHSTAHLLAQAIKRLYGKEHHVQFGVGPVIENGFYYDVDIDVAITP 120

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
           ++L +IEK+M++II  + P  +  +S E+A++ FE+  +  K+E+LE+IP  E VT+Y Q
Sbjct: 121 EDLPKIEKEMKKIINSNLPIERIEVSREEAKKRFEAIGDQLKLELLEAIPEGEAVTIYEQ 180

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           GE+FDLCRG H+ STG++K+ FKL+ +AGAYWRGDSN  ML RIYGTA+ ++ +L ++L 
Sbjct: 181 GEFFDLCRGIHLSSTGKIKE-FKLLSLAGAYWRGDSNNQMLQRIYGTAFFSKDDLNEHLR 239

Query: 237 FLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEI 294
            LEE+++RDHRKL +E+ LF  ++  G G+  W  KG  I + +  Y+  ++++  YE +
Sbjct: 240 LLEEAKERDHRKLGKELKLFANSQKVGQGLPLWLPKGATIRRVIERYIVDKEVRLGYEHV 299

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
            TP + +  L++ SGHW  Y+ +MF V   D+         L+PMNCP H+ ++ +   S
Sbjct: 300 YTPVLANVELYKTSGHWAHYQEDMFPVMEMDN-----EDLVLRPMNCPHHMMIYKNEPHS 354

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YRELP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+ +E ++   LI  +
Sbjct: 355 YRELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKDEFIRTVRLIEEV 414

Query: 415 YKDFGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
           Y+DFG      +LS R     EK    DA+W+ A++++K  +D + +   +        G
Sbjct: 415 YQDFGLNDYTFRLSYRDPEDTEKYFDDDAMWNKAQSMLKDAMDELGHDYYE------AEG 468

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           E AFYGPK +  +K A+G++    T+QVDF LP RF+  Y+    +   PV+IHR V  +
Sbjct: 469 EAAFYGPKLDVQVKTALGKEETLSTVQVDFLLPERFDLTYIGEDGKHHRPVVIHRGVVST 528

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNE 589
           +ERF+  +IE +KG LP WL+P+Q  V  ++ S  ++YA+++   L+   L +E D R+E
Sbjct: 529 MERFVAFLIEEYKGALPTWLAPVQFQVIPVSPSVHLDYAKKVQERLQLEGLRVELDSRDE 588

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
            I YKIRE  ++KIP +++ GD+EA   ++ +R++G   ++ + L
Sbjct: 589 KIGYKIREAQMQKIPYMLVVGDQEAENGAVNVRKYGEQDSETMDL 633


>gi|206900126|ref|YP_002250745.1| threonyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
 gi|206739229|gb|ACI18287.1| threonyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
          Length = 638

 Score =  530 bits (1366), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 266/594 (44%), Positives = 387/594 (65%), Gaps = 18/594 (3%)

Query: 33  SLAKKAVAVAINGKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE 91
            L KK     ING + DL+   ++GS +E++  E     ++ RH+ AHI+A AV+ ++PE
Sbjct: 26  GLEKKVFGAKINGVLSDLNVFPQDGSFVELLDWESEDGRSIYRHTSAHILAHAVKELFPE 85

Query: 92  VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFE 151
           V++ IGP IEDGFYYDF + +PFS ++L +IE KM+EII +D P  +  ++ E+A  + +
Sbjct: 86  VKLGIGPAIEDGFYYDFYRSEPFSQEDLEKIEAKMREIIKQDLPIERIEVTREEAERILK 145

Query: 152 SKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGD 211
             KE +K+E+LE IP  E ++ YRQG + DLCRGPH+ STG VK F KL+ V+GAYWRG+
Sbjct: 146 EMKEDFKLELLEEIPEGERISFYRQGNFIDLCRGPHLPSTGWVKSF-KLLSVSGAYWRGN 204

Query: 212 SNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHR 270
              PM  RIYGT++ +++EL +YL   EE+++RDHRKL RE+++F   E+ G G+IF+  
Sbjct: 205 EKNPMFQRIYGTSFPSEEELKKYLEEREEAQRRDHRKLGRELEIFDTFEEAGPGLIFYPP 264

Query: 271 KGWKIFQTLISYMRRK--IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTI 328
           KG  + + +I    RK  +K  Y  + TP ++   LW++SGHWD+YR NMF ++  D   
Sbjct: 265 KG-AMLRLIIEEFERKEHLKRGYLPVITPHLMQAELWKRSGHWDNYRENMFFLQVED--- 320

Query: 329 KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQ 388
              + +A+KPMNCPGH+ ++N  ++SYR+LP+R  E G+VYR E SG L+GL R RGFTQ
Sbjct: 321 ---KDYAVKPMNCPGHILIYNSKVRSYRDLPLRFFEMGTVYRYERSGVLYGLERARGFTQ 377

Query: 389 DDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIM 448
           DDAH+FCT+EQ+ +E   + + +  +   FG +  +V LST+PEK +GSD +W+ A   +
Sbjct: 378 DDAHIFCTQEQLEDEIKGVLDFVFYMLDSFGLKDYVVTLSTKPEKYIGSDEIWEKATQAL 437

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
           K  L+++       I+  +  GEGAFYGPK +  LK  +G+ WQ  TIQVDFNLP RF+ 
Sbjct: 438 KNALESVG------IDYRIAEGEGAFYGPKIDVGLKGLLGKMWQGPTIQVDFNLPERFDL 491

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYA 568
            Y      K  PVMIHRA+ GS ERFIGI+IE++ G  PLWL+P Q  +  I+    EYA
Sbjct: 492 TYDAPDGTKKRPVMIHRAILGSYERFIGILIEHYGGRFPLWLAPEQVRILPISEKHNEYA 551

Query: 569 QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           + +   L+ + +  E D     +NYK+R+   +K+P I I GDKE  E  + +R
Sbjct: 552 EYVLRTLRDNEIRAEIDKDQAKLNYKLRKAIAEKVPYIFIVGDKEKEEGKVSVR 605


>gi|296876104|ref|ZP_06900158.1| threonine--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
 gi|296432815|gb|EFH18608.1| threonine--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
          Length = 647

 Score =  530 bits (1366), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 267/640 (41%), Positives = 411/640 (64%), Gaps = 23/640 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  + E G+IEI+T
Sbjct: 2   IKITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGNIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQI 122
           P+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D +    S+++L +I
Sbjct: 62  PDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNQAGQISNEDLPRI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWFD 181
           E++M++I+  + P +++ ++ ++ARE+F  K + YK+E++E     E  +T+YRQGE+ D
Sbjct: 122 EEEMKKIVKENFPSIREEVTKDQAREIF--KNDPYKLELIEEHSEDEGGLTIYRQGEYID 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++  F L+ VAGAYWRG+S+  M+ RIYGTAW  +++L  YL   EE+
Sbjct: 180 LCRGPHVPSTGRIQ-IFHLLNVAGAYWRGNSDNAMMQRIYGTAWFDKKDLKNYLQMREEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+++ G G+ FW   G  I + L  Y+  ++I   Y+ + TP +
Sbjct: 239 KERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVDKEIAAGYQHVYTPPI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHWD YR +MF        + D   F L+PMNCP H+ V+ H + SYRELP
Sbjct: 299 ASVELYKTSGHWDHYREDMFPPM----DMGDGEEFVLRPMNCPHHIEVYKHHVHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  + +D H F   EQ+  E  KI  LII +Y+DF 
Sbjct: 355 IRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHTFVAPEQIEEEFKKILQLIIDVYEDFN 414

Query: 420 FEKIMVKLSTR-PE---KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R PE   K   +D +W++A+ ++K  +D +       +      GE AFY
Sbjct: 415 LTDYRFRLSYRDPEDKHKYFDNDEMWENAQRMLKAAVDDMG------VEYYEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G++    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF 
Sbjct: 469 GPKLDIQVKTALGKEETLSTIQLDFLLPERFDLHYIGADGEEHRPVMIHRGVISTMERFT 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IEN+KG  P WL+P Q  +  +++   V+YA E+A  L+   +  + D RNE + +K
Sbjct: 529 AILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAKQLRDRGVRADVDERNEKMQFK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           IR    +KIP  +I GDKE  ++++ +RR+G   T+ +S+
Sbjct: 589 IRASQTQKIPYQLIVGDKEMEDKAVNVRRYGQKETETMSV 628


>gi|315612715|ref|ZP_07887626.1| threonine--tRNA ligase [Streptococcus sanguinis ATCC 49296]
 gi|315314825|gb|EFU62866.1| threonine--tRNA ligase [Streptococcus sanguinis ATCC 49296]
          Length = 647

 Score =  530 bits (1366), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 268/644 (41%), Positives = 411/644 (63%), Gaps = 23/644 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  + E GSIEI+T
Sbjct: 2   IKITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRSITEDGSIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQI 122
           P+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D      S+++L +I
Sbjct: 62  PDHEDALDILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNTAGQISNEDLPRI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWFD 181
           E++MQ+I+  + P +++ ++ ++ARE+F  K + YK+E++E     E  +T+YRQGE+ D
Sbjct: 122 EEEMQKIVKENFPSIREEVTKDEAREIF--KNDPYKLELIEEHSEDEGGLTIYRQGEYVD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++  F L+ VAGAYWRG+S+  M+ RIYGTAW  +++L  YL   EE+
Sbjct: 180 LCRGPHVPSTGRIQ-IFHLLHVAGAYWRGNSDNAMMQRIYGTAWFDKKDLKNYLQMREEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+++ G G+ FW   G  I + L  Y+  +++   Y+ + TP +
Sbjct: 239 KERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVDKELASGYQHVYTPPL 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHWD Y+ +MF        + D   F L+PMNCP H+ VF H + SYRELP
Sbjct: 299 ASVELYKTSGHWDHYQEDMFPTM----DMGDGEEFVLRPMNCPHHIQVFKHHVHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y+DF 
Sbjct: 355 IRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYEDFN 414

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
             +   +LS R      K   +D +W++A+ +++  LD +       ++     GE AFY
Sbjct: 415 LTEYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G++    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF 
Sbjct: 469 GPKLDIQVKTALGKEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMIHRGVISTMERFT 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IEN+KG  P WL+P Q  +  +++   V+YA E+A  L+   +  + D RNE + +K
Sbjct: 529 AILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAKKLRDCGVRADVDERNEKMQFK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           IR     KIP  +I GDKE  + ++ +RR+G   TQ VS+ D +
Sbjct: 589 IRASQTSKIPYQLIVGDKEMEDGTVNVRRYGQKETQTVSVDDFV 632


>gi|322389968|ref|ZP_08063508.1| threonine--tRNA ligase [Streptococcus parasanguinis ATCC 903]
 gi|321143404|gb|EFX38842.1| threonine--tRNA ligase [Streptococcus parasanguinis ATCC 903]
          Length = 647

 Score =  530 bits (1366), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 267/640 (41%), Positives = 411/640 (64%), Gaps = 23/640 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  + E GSIEI+T
Sbjct: 2   IKITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGSIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQI 122
           P+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D +    S+++L +I
Sbjct: 62  PDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNQAGQISNEDLPRI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWFD 181
           E++M++I+  + P +++ ++ ++ARE+F  K + YK+E++E     E  +T+YRQGE+ D
Sbjct: 122 EEEMKKIVKENFPSIREEVTKDEAREIF--KNDPYKLELIEEHSEDEGGLTIYRQGEYVD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++  F L+ VAGAYWRG+S+  M+ RIYGTAW  +++L  YL   EE+
Sbjct: 180 LCRGPHVPSTGRIQ-IFHLLNVAGAYWRGNSDNAMMQRIYGTAWFDKKDLKNYLQMREEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+++ G G+ FW   G  I + L  Y+  +++   Y+ + TP +
Sbjct: 239 KERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVDKEVAAGYQHVYTPPI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHWD YR +MF        + D   F L+PMNCP H+ V+ H + SYRELP
Sbjct: 299 ASVELYKTSGHWDHYREDMFPPM----DMGDGEEFVLRPMNCPHHIEVYKHHVHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  + +D H F   EQ+  E  KI  LII +Y+DF 
Sbjct: 355 IRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHTFVAPEQIEEEFKKILQLIIDVYEDFN 414

Query: 420 FEKIMVKLSTR-PE---KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R PE   K   +D +W++A+ ++K  +D +       +      GE AFY
Sbjct: 415 LTDYRFRLSYRDPEDKHKYFDNDEMWENAQRMLKAAVDDMG------VEYYEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G++    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF 
Sbjct: 469 GPKLDIQVKTALGKEETLSTIQLDFLLPERFDLHYIGADGEEHRPVMIHRGVISTMERFT 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IEN+KG  P WL+P Q  +  +++   V+YA E+A  L+   +  + D RNE + +K
Sbjct: 529 AILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAKKLRDRGVRADVDERNEKMQFK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           IR    +KIP  +I GDKE  ++++ +RR+G   T+ +S+
Sbjct: 589 IRASQTQKIPYQLIVGDKEMEDKAVNVRRYGQKETETMSV 628


>gi|312868227|ref|ZP_07728427.1| threonine--tRNA ligase [Streptococcus parasanguinis F0405]
 gi|311095972|gb|EFQ54216.1| threonine--tRNA ligase [Streptococcus parasanguinis F0405]
          Length = 647

 Score =  530 bits (1366), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 267/640 (41%), Positives = 411/640 (64%), Gaps = 23/640 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  + E GSIEI+T
Sbjct: 2   IKITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGSIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQI 122
           P+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D +    S+++L +I
Sbjct: 62  PDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNQAGQISNEDLPRI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWFD 181
           E++M++I+  + P +++ ++ ++ARE+F  K + YK+E++E     E  +T+YRQGE+ D
Sbjct: 122 EEEMKKIVKENFPSIREEVTKDQAREIF--KNDPYKLELIEEHSDDEGGLTIYRQGEYVD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++  F L+ VAGAYWRG+S+  M+ RIYGTAW  +++L  YL   EE+
Sbjct: 180 LCRGPHVPSTGRIQ-IFHLLNVAGAYWRGNSDNAMMQRIYGTAWFDKKDLKNYLQMREEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+++ G G+ FW   G  I + L  Y+  +++   Y+ + TP +
Sbjct: 239 KERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVDKEVAAGYQHVYTPPI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHWD YR +MF        + D   F L+PMNCP H+ V+ H + SYRELP
Sbjct: 299 ASVELYKTSGHWDHYREDMFPPM----DMGDGEEFVLRPMNCPHHIEVYKHHVHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  + +D H F   EQ+  E  KI  LII +Y+DF 
Sbjct: 355 IRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHTFVAPEQIEEEFKKILQLIIDVYEDFN 414

Query: 420 FEKIMVKLSTR-PE---KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R PE   K   +D +W++A+ ++K  +D +       +      GE AFY
Sbjct: 415 LTDYRFRLSYRDPEDKHKYFDNDEMWENAQRMLKAAVDDMG------VEYYEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G++    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF 
Sbjct: 469 GPKLDIQVKTALGKEETLSTIQLDFLLPERFDLHYIGADGEEHRPVMIHRGVISTMERFT 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IEN+KG  P WL+P Q  +  +++   V+YA E+A  L+   +  + D RNE + +K
Sbjct: 529 AILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAKKLRDRGVRADVDERNEKMQFK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           IR    +KIP  +I GDKE  ++++ +RR+G   T+ +S+
Sbjct: 589 IRASQTQKIPYQLIVGDKEMEDKAVNVRRYGQKETETMSV 628


>gi|327439263|dbj|BAK15628.1| threonyl-tRNA synthetase [Solibacillus silvestris StLB046]
          Length = 643

 Score =  530 bits (1366), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 263/652 (40%), Positives = 416/652 (63%), Gaps = 20/652 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M   IKLTFPDG++K F    +  DVA SIS  L K  +A  ING + D    + ++G+I
Sbjct: 1   MSEMIKLTFPDGAVKEFAKGTSTLDVAGSISPGLKKSTLAGKINGTLIDAKTGIEQDGAI 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT +   +L ++RHS AH+ A+AV+ ++P+ ++ IGP+I+ GFYYD D   P ++++L
Sbjct: 61  EIITNKSDEALEILRHSTAHLTAQAVKRLYPDAKLGIGPVIDSGFYYDIDSPTPITAEDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEK+M++IIA +    ++ +S ++A++++E   + YK+E+LE+IPA + V++Y QG++
Sbjct: 121 PAIEKEMKKIIAENIEIERKNVSRDEAQKIYEEVGDEYKLELLEAIPADDQVSIYYQGDF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRG HV STG++K+ FKL+ +AGAYWRG+S+  ML RIYGTA+ T+ EL  +L  LE
Sbjct: 181 FDLCRGVHVPSTGKLKE-FKLLSLAGAYWRGNSDNKMLQRIYGTAFFTKDELKHHLQMLE 239

Query: 240 ESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTP 297
           E+++RDHRK+ +E+DLF  ++  G G+  W   G  I +T+  Y+  +++   Y+ + TP
Sbjct: 240 EAKERDHRKIGKELDLFMTSQTVGQGLPLWLPNGATIRRTIERYIVDKELSLGYKHVYTP 299

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +  + L++ SGHW+ Y+  MF     D+      T  L+PMNCP H+ VF +GL SYR 
Sbjct: 300 VLGSKKLYETSGHWEHYQDGMFPPMEMDN-----ETLVLRPMNCPHHMMVFKNGLHSYRH 354

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AE G+++R E SG++ GL RVRG T +DAH+F   +Q+  E  K+  LI+ +YKD
Sbjct: 355 LPIRIAELGTMHRYEMSGAVSGLQRVRGMTLNDAHIFVRPDQIKAEFKKVVELILEVYKD 414

Query: 418 FGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           F  +    +LS R     EK    D +W+ A+ ++K  +D +        +  +   E A
Sbjct: 415 FDLKDFSFRLSYRDPNNTEKYFDDDQMWETAQAMLKEAMDELG------YDYFIAEDEAA 468

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  +K AIG++    T Q+DF LP RF+  Y+    +   PV+IHR V  ++ER
Sbjct: 469 FYGPKLDVQVKTAIGKEETLSTAQLDFLLPQRFDLSYIGEDGQPQRPVVIHRGVVSTMER 528

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETIN 592
           F+  +IE +KG  P WL+P+QA +  ++++   +YA+E+   L +  + +E D R E + 
Sbjct: 529 FVAFLIEEYKGAFPTWLAPVQATIIPVSNAVHYDYAREVQEKLAAAGIRVEMDDREEKLG 588

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           YKIRE  ++KIP +++ GDKE +E ++ IRR+GS  ++ +S    +  +T E
Sbjct: 589 YKIREAQMQKIPYMLVLGDKEVAENAVNIRRYGSKDSETISFEQFLADITAE 640


>gi|225857248|ref|YP_002738759.1| threonyl-tRNA synthetase [Streptococcus pneumoniae P1031]
 gi|254783542|sp|C1CLX1|SYT_STRZP RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|225725171|gb|ACO21023.1| threonyl-tRNA synthetase [Streptococcus pneumoniae P1031]
          Length = 647

 Score =  530 bits (1366), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 267/640 (41%), Positives = 406/640 (63%), Gaps = 23/640 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           I +TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  + E GSIEI+T
Sbjct: 2   INITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGSIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQI 122
           P+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D      S+++L +I
Sbjct: 62  PDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNTAGQISNEDLPRI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWFD 181
           E++MQ+I+  + P +++ ++ ++ARE+F  K + YK+E++E     E  +T+YRQGE+ D
Sbjct: 122 EEEMQKIVKENFPSIREEVTKDEAREIF--KNDPYKLELIEEHSEDEGGLTIYRQGEYVD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++  F L+ VAGAYWRG+S+  M+ RIYGTAW  +++L  YL   EE+
Sbjct: 180 LCRGPHVPSTGRIQ-IFHLLHVAGAYWRGNSDNAMMQRIYGTAWFDKKDLKNYLQMREEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+++ G G+ FW   G  I + L  Y+  +++   Y+ + TP +
Sbjct: 239 KERDHRKLGKELDLFIISQEVGQGLPFWLPNGATIRRELERYIVNKELASGYQHVYTPPL 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHWD Y+ +MF        + D   F L+PMNCP H+ VF H + SYRELP
Sbjct: 299 ASVELYKTSGHWDHYQEDMFPTM----DMGDGEEFVLRPMNCPHHIQVFKHHVHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y+DF 
Sbjct: 355 IRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYEDFN 414

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R      K   +D +W++A+ +++  LD +       +N     GE AFY
Sbjct: 415 LTDYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VNYFEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G++    TIQ+DF LP RF+  Y+ +  E   PVMIHR V  ++ERF 
Sbjct: 469 GPKLDIQIKTALGKEETLSTIQLDFLLPERFDLKYIGADGEDHRPVMIHRGVISTMERFT 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IEN+KG  P WL+P Q  +  +++   V+YA E+A  L+   +  + D RNE + +K
Sbjct: 529 AILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAKKLRDRGVRADVDERNEKMQFK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           IR     KIP  +I GDKE  + ++ +RR+G   TQ VS+
Sbjct: 589 IRASQTSKIPYQLIVGDKEMEDETVNVRRYGQKETQTVSV 628


>gi|19745635|ref|NP_606771.1| threonyl-tRNA synthetase [Streptococcus pyogenes MGAS8232]
 gi|94988057|ref|YP_596158.1| threonyl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
 gi|94991943|ref|YP_600042.1| threonyl-tRNA synthetase [Streptococcus pyogenes MGAS2096]
 gi|139474254|ref|YP_001128970.1| threonyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
 gi|306827837|ref|ZP_07461106.1| threonine--tRNA ligase [Streptococcus pyogenes ATCC 10782]
 gi|25453286|sp|Q8P234|SYT_STRP8 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|123080426|sp|Q1JMY5|SYT_STRPC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|123382336|sp|Q1JD10|SYT_STRPB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|166225506|sp|A2RFY5|SYT_STRPG RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|19747765|gb|AAL97270.1| putative threonyl-tRNA synthetase 1 [Streptococcus pyogenes
           MGAS8232]
 gi|94541565|gb|ABF31614.1| threonyl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
 gi|94545451|gb|ABF35498.1| Threonyl-tRNA synthetase [Streptococcus pyogenes MGAS2096]
 gi|134272501|emb|CAM30764.1| threonyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
 gi|304429946|gb|EFM32986.1| threonine--tRNA ligase [Streptococcus pyogenes ATCC 10782]
          Length = 647

 Score =  530 bits (1366), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 273/639 (42%), Positives = 405/639 (63%), Gaps = 23/639 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+TFPDG+++ F    T  D+AESIS+SLAKKA+A   N ++ D +  + E GSIEI+T
Sbjct: 2   IKITFPDGAVREFESGVTTFDIAESISKSLAKKALAGKFNDQLIDTTRAIEEDGSIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
           P+   +  V+RHS AH+ A+A + ++P + + +GP I +GFYYD D  E   S+++L +I
Sbjct: 62  PDHKDAYEVLRHSAAHLFAQAAKRLFPNLHLGVGPAIAEGFYYDTDNAEGQISNEDLPRI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +MQ+I+  + P +++ ++ E+A ELF  K + YKVE++    A   +T+YRQGE+ DL
Sbjct: 122 EAEMQKIVTENYPCIREEVTKEEALELF--KDDPYKVELINE-HAGAGLTVYRQGEFVDL 178

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG+++  F L+ VAGAYWRG+S+  M+ RIYGTAW  +++L  YL  LEE++
Sbjct: 179 CRGPHVPSTGRIQ-VFHLLNVAGAYWRGNSDNNMMQRIYGTAWFDKKDLKAYLTRLEEAK 237

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVL 300
           +RDHRKL +E+DLF I+++ G G+ FW   G  I +TL  Y+  K +   Y+ + TP + 
Sbjct: 238 ERDHRKLGKELDLFMISQEVGQGLPFWLPDGATIRRTLERYITDKELASGYQHVYTPPLA 297

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
              L++ SGHWD Y+ +MF V      + D   F L+PMNCP H+ V+ + ++SYRELP+
Sbjct: 298 SVELYKTSGHWDHYQEDMFPVM----DMGDGEEFVLRPMNCPHHIQVYKNHVRSYRELPI 353

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G ++R E SG+L GL RVR  T +D H+F T EQ+  E  +   LII +Y DF  
Sbjct: 354 RIAELGMMHRYEKSGALSGLQRVREMTLNDGHIFVTPEQIQEEFQRALQLIIDVYADFNL 413

Query: 421 EKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
                +LS R      K   +D +W++A++++K  LD +       ++     GE AFYG
Sbjct: 414 TDYRFRLSYRDPNDTHKYYDNDEMWENAQSMLKAALDEMG------VDYFEAEGEAAFYG 467

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK +  +K A+G +    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF  
Sbjct: 468 PKLDIQVKTALGNEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMIHRGVISTMERFTA 527

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKI 595
           I+IE +KG  P WL+P Q  V  I++ A ++YA E+A  L+   +  + D RNE + YKI
Sbjct: 528 ILIETYKGAFPTWLAPHQVTVIPISNEAHIDYAWEVAKTLRDRGVRADVDDRNEKMQYKI 587

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           R     KIP  +I GDKE  ++S+ +RR+GS  T   S+
Sbjct: 588 RASQTSKIPYQLIVGDKEMEDKSVNVRRYGSKATHTESV 626


>gi|194397191|ref|YP_002038247.1| threonyl-tRNA synthetase [Streptococcus pneumoniae G54]
 gi|238690846|sp|B5E6Q8|SYT_STRP4 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|194356858|gb|ACF55306.1| threonyl-tRNA synthetase (thrS) [Streptococcus pneumoniae G54]
          Length = 647

 Score =  530 bits (1365), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 267/640 (41%), Positives = 406/640 (63%), Gaps = 23/640 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           I +TFPDG+I+ F    T  ++A+SIS SLAKKA+A   NGK+ D +  + E GSIEI+T
Sbjct: 2   INITFPDGAIREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGSIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQI 122
           P+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D      S+++L +I
Sbjct: 62  PDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNTAGQISNEDLPRI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWFD 181
           E++MQ+I+  + P +++ ++ ++ARE+F  K + YK+E++E     E  +T+YRQGE+ D
Sbjct: 122 EEEMQKIVKENFPSIREEVTKDEAREIF--KNDPYKLELIEEHSEDEGGLTIYRQGEYVD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++  F L+ VAGAYWRG+S+  M+ RIYGTAW  +++L  YL   EE+
Sbjct: 180 LCRGPHVPSTGRIQ-IFHLLHVAGAYWRGNSDNAMMQRIYGTAWFDKKDLKNYLQMREEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+++ G G+ FW   G  I + L  Y+  +++   Y+ + TP +
Sbjct: 239 KERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVNKELASGYQHVYTPPL 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHWD Y+ +MF        + D   F L+PMNCP H+ VF H + SYRELP
Sbjct: 299 ASVELYKTSGHWDHYQEDMFPTM----DMGDGEEFVLRPMNCPHHIQVFKHHVHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y+DF 
Sbjct: 355 IRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYEDFN 414

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R      K   +D +W++A+ +++  LD +       ++     GE AFY
Sbjct: 415 LTDYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G++    TIQ+DF LP RF+  Y+ +  E   PVMIHR V  ++ERF 
Sbjct: 469 GPKLDIQIKTALGKEETLSTIQLDFLLPERFDLKYIGADGEDHRPVMIHRGVISTMERFT 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IEN+KG  P WL+P Q  +  +++   V+YA E+A  L+   +  + D RNE + +K
Sbjct: 529 AILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAKKLRDRGVRADVDERNEKMQFK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           IR     KIP  +I GDKE  + ++ +RR+G   TQ VS+
Sbjct: 589 IRASQTSKIPYQLIVGDKEMEDETVNVRRYGQKETQTVSV 628


>gi|163790751|ref|ZP_02185177.1| threonyl-tRNA synthetase [Carnobacterium sp. AT7]
 gi|159873931|gb|EDP68009.1| threonyl-tRNA synthetase [Carnobacterium sp. AT7]
          Length = 645

 Score =  530 bits (1365), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 261/651 (40%), Positives = 414/651 (63%), Gaps = 22/651 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           S+IK+TFPDG++K+FP  ++  ++AESIS+ LAKKA+A   NG++ DL  P+  +GSIEI
Sbjct: 2   SEIKITFPDGAVKDFPAGSSTKEIAESISKGLAKKALAGKFNGELVDLIRPLESDGSIEI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           ITP+   +L ++RHS AH+MA A++ ++P+++  +GP I  GFYYD D E P + +++ +
Sbjct: 62  ITPDHEDALQILRHSTAHLMANALRRLYPDIKFGVGPAISTGFYYDTDSEAPITDEDIPK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE +M  I+  ++P +++ ++ E+A E+F  K + YKVE++ ++P  E +T+Y QG++ D
Sbjct: 122 IEAEMMAIVKENNPIIRKEVTREEALEIF--KDDPYKVELITNLPESEAITVYDQGDFVD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG HV STG++ + FKL+ +AGAYWRG+S+  M+ R+YGTA+  +++L +++   EE+
Sbjct: 180 LCRGVHVPSTGRI-QVFKLLSLAGAYWRGNSDNKMMQRVYGTAFFDKKDLKEFIQMREEA 238

Query: 242 EKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           + RDHRKL +E+DLF I+ E GSG+ FW  KG  I +T+  Y+  R+I   Y+ + TP +
Sbjct: 239 KLRDHRKLGKELDLFMISPEVGSGLPFWLPKGATIRRTIERYIVDREISLGYQHVYTPIM 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            D +L++ SGHWD Y  +MF        + D     L+PMNCP H+ V+ + + SYRELP
Sbjct: 299 ADVNLYKTSGHWDHYHEDMFPPM----DMGDGEMLVLRPMNCPHHMMVYKNDVHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  T +D H F   +Q+  E  +   L++++Y DF 
Sbjct: 355 IRIAELGQMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIEEEFKRTLELMLAVYGDFN 414

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R     EK    DA+W+ A+ ++K  +D +       ++     GE AFY
Sbjct: 415 ITDYRFRLSYRDPNNTEKYYDDDAMWEKAQTMLKAAMDDMG------LDYFEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH-PVMIHRAVFGSIERF 534
           GPK + ++K AIG +    TIQ+DF LP RF+  YV    E  H PV+IHR +  ++ERF
Sbjct: 469 GPKLDVLVKTAIGIEETLSTIQLDFLLPERFDLTYVGEDGENNHRPVVIHRGIVSTMERF 528

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINY 593
           +  +IE +KG  P WL+P+QA +  +      +YA EI   ++   + +E D RNE + Y
Sbjct: 529 VAYLIEEYKGAFPTWLAPVQATIIPVNLDMHTDYAYEIKKQMERIGMRVEVDERNEKMGY 588

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR    +KIP  ++ GD E  + ++ +R++G   T  ++L + +  ++KE
Sbjct: 589 KIRASQTQKIPYQLVVGDSEVQDNTVAVRKYGEKATVTINLSEYLETVSKE 639


>gi|322388243|ref|ZP_08061847.1| threonine--tRNA ligase [Streptococcus infantis ATCC 700779]
 gi|321140915|gb|EFX36416.1| threonine--tRNA ligase [Streptococcus infantis ATCC 700779]
          Length = 647

 Score =  530 bits (1365), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 266/640 (41%), Positives = 410/640 (64%), Gaps = 23/640 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  + E GSIEI+T
Sbjct: 2   IKITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGSIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQI 122
           P+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D +    S+++L +I
Sbjct: 62  PDHEDALDILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNQAGQISNEDLPRI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWFD 181
           E++MQ+I+  + P +++ ++ ++ARE+F  K + YK+E++E     E  +T+YRQGE+ D
Sbjct: 122 EEEMQKIVKENFPSIREEVTKDEAREIF--KNDPYKLELIEEHSEDEGGLTIYRQGEYVD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++  F L+ VAGAYWRG+S+  M+ RIYGTAW  +++L  YL   EE+
Sbjct: 180 LCRGPHVPSTGRIQ-IFHLLHVAGAYWRGNSDNAMMQRIYGTAWFDKKDLKNYLQMREEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+++ G G+ FW   G  I + L  Y+  +++   Y+ + TP +
Sbjct: 239 KERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVDKELASGYQHVYTPPL 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHWD Y+ +MF        + D   F L+PMNCP H+ VF H + SYRELP
Sbjct: 299 ASVELYKTSGHWDHYQEDMFPTM----DMGDGEEFVLRPMNCPHHIQVFKHHVHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y+DF 
Sbjct: 355 IRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYEDFN 414

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
             +   +LS R      K   +D +W++A+ +++  LD +       ++     GE AFY
Sbjct: 415 LNEYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G++    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF 
Sbjct: 469 GPKLDIQVKTALGKEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMIHRGVISTMERFT 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IEN+KG  P WL+P Q  +  +++   V+YA E+A  L+   +  + D RNE + +K
Sbjct: 529 AILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAKKLRDRGVRADVDERNEKMQFK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           IR    +KIP  +I GDKE  + ++ +RR+G   T  VS+
Sbjct: 589 IRASQTQKIPYQLIVGDKEMEDGTVNVRRYGQKETNTVSV 628


>gi|315186787|gb|EFU20545.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Spirochaeta
           thermophila DSM 6578]
          Length = 578

 Score =  530 bits (1365), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 259/569 (45%), Positives = 369/569 (64%), Gaps = 16/569 (2%)

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIAR 132
           IRHS AHIMA+AV  ++PE + AIGP I+ GFYYDFD  +  + ++L +IE+ M++ I  
Sbjct: 9   IRHSAAHIMADAVLRLFPEAKFAIGPAIDTGFYYDFDLPRSLTPEDLEKIEELMRKTIEE 68

Query: 133 DSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTG 192
           D PF ++ +S E+ARELF  K + YK+EILE IP  E V++YR G + DLCRGPHV  TG
Sbjct: 69  DLPFKREVISREEARELF--KDQPYKLEILEEIPEGEEVSIYRHGTFVDLCRGPHVERTG 126

Query: 193 QVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAR 251
           Q+     KL+ +AGAYWRGD  RPML RIYGTAW+T +EL QYL  L+E EKRDHR+L +
Sbjct: 127 QINPDAVKLLSIAGAYWRGDERRPMLQRIYGTAWHTPKELRQYLEHLKEVEKRDHRRLGK 186

Query: 252 EMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSG 309
           E+DLF + E+ G G+I+WH KG +I   + ++ R + +   YE + TP +    LW+ SG
Sbjct: 187 ELDLFSVHEEAGPGLIYWHPKGARIRLEIENFWREQHLARGYEVLYTPHIGKAWLWETSG 246

Query: 310 HWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVY 369
           H   Y+ NM+A    D +      + +KPMNCP H+ ++   L+SYRELP+R AE G+VY
Sbjct: 247 HLSFYKENMYAPMEVDKS-----DYYIKPMNCPFHIMIYKTRLRSYRELPLRWAELGTVY 301

Query: 370 RNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
           R E SG LHGL+RVRGFTQDDAH+FCT EQ+ +E L+     + ++K FGF  +   LST
Sbjct: 302 RYERSGVLHGLLRVRGFTQDDAHIFCTPEQIEDEILETLRFSLFMWKTFGFSDVKAYLST 361

Query: 430 RPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGR 489
           RP+K VG    W+ A   ++  ++      ++ ++  V  G GAFYGPK +  ++DA+GR
Sbjct: 362 RPDKSVGEPERWEQATESLRKAIE------REGLDYEVDEGGGAFYGPKIDIKVRDALGR 415

Query: 490 DWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW 549
           +WQ  TIQ DFNLP RF+  YV++   +  P M+HRA+ GS+ERF GI++E++ G  P+W
Sbjct: 416 EWQTSTIQFDFNLPERFDITYVDADGREKRPYMVHRALLGSLERFFGILVEHYGGAFPVW 475

Query: 550 LSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIIC 609
           L+P+Q +V  ++     YAQE+   L+   +  E D   + +N KIR+   +KIP  +I 
Sbjct: 476 LAPVQVVVIPVSDVFAGYAQEVVRALREAGVRAEADLSADRMNAKIRKAQQEKIPYAVIV 535

Query: 610 GDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           G +E   R++ +R  G      V+L D +
Sbjct: 536 GQREQEGRTVSVRVRGGEQRNGVALGDFV 564


>gi|94993836|ref|YP_601934.1| threonyl-tRNA synthetase [Streptococcus pyogenes MGAS10750]
 gi|123080137|sp|Q1J7X1|SYT_STRPF RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|94547344|gb|ABF37390.1| Threonyl-tRNA synthetase [Streptococcus pyogenes MGAS10750]
          Length = 647

 Score =  530 bits (1365), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 273/639 (42%), Positives = 405/639 (63%), Gaps = 23/639 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+TFPDG+++ F    T  D+AESIS+SLAKKA+A   N ++ D +  + E GSIEI+T
Sbjct: 2   IKITFPDGAVREFESGVTTFDIAESISKSLAKKALAGKFNDQLIDTTRAIEEDGSIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
           P+   +  V+RHS AH+ A+A + ++P + + +GP I +GFYYD D  E   S+++L +I
Sbjct: 62  PDHKDAYEVLRHSAAHLFAQAAKRLFPNLHLGVGPAIAEGFYYDTDNAEGQISNEDLPRI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +MQ+I+  + P +++ ++ E+A ELF  K + YKVE++    A   +T+YRQGE+ DL
Sbjct: 122 EAEMQKIVTENYPCIREEVTKEEALELF--KDDPYKVELINE-HAGAGLTVYRQGEFVDL 178

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG+++  F L+ VAGAYWRG+S+  M+ RIYGTAW  +++L  YL  LEE++
Sbjct: 179 CRGPHVPSTGRIQ-VFHLLNVAGAYWRGNSDNNMMQRIYGTAWFDKKDLKAYLTRLEEAK 237

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVL 300
           +RDHRKL +E+DLF I+++ G G+ FW   G  I +TL  Y+  K +   Y+ + TP + 
Sbjct: 238 ERDHRKLGKELDLFMISQEVGQGLPFWLPDGATIRRTLERYITDKELASGYQHVYTPPLA 297

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
              L++ SGHWD Y+ +MF V      + D   F L+PMNCP H+ V+ + ++SYRELP+
Sbjct: 298 SVELYKTSGHWDHYQEDMFPVM----DMGDGEEFVLRPMNCPHHIQVYKNHVRSYRELPI 353

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G ++R E SG+L GL RVR  T +D H+F T EQ+  E  +   LII +Y DF  
Sbjct: 354 RIAELGMMHRYEKSGALSGLQRVREMTLNDGHIFVTPEQIQEEFRRALQLIIDVYADFNL 413

Query: 421 EKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
                +LS R      K   +D +W++A++++K  LD +       ++     GE AFYG
Sbjct: 414 TDYRFRLSYRDPNDTHKYYDNDEMWENAQSMLKAALDEMG------VDYFEAEGEAAFYG 467

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK +  +K A+G +    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF  
Sbjct: 468 PKLDIQVKTALGNEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMIHRGVISTMERFTA 527

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKI 595
           I+IE +KG  P WL+P Q  V  I++ A ++YA E+A  L+   +  + D RNE + YKI
Sbjct: 528 ILIETYKGAFPTWLAPHQVTVIPISNEAHIDYAWEVAKTLRDRGVRADVDDRNEKMQYKI 587

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           R     KIP  +I GDKE  ++S+ +RR+GS  T   S+
Sbjct: 588 RASQTSKIPYQLIVGDKEMEDKSVNVRRYGSKATHTESV 626


>gi|289167501|ref|YP_003445770.1| Threonyl-tRNA synthetase, threonine-tRNA ligase [Streptococcus
           mitis B6]
 gi|288907068|emb|CBJ21902.1| Threonyl-tRNA synthetase, threonine-tRNA ligase [Streptococcus
           mitis B6]
          Length = 647

 Score =  530 bits (1365), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 267/644 (41%), Positives = 410/644 (63%), Gaps = 23/644 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           I +TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  + E GSIEI+T
Sbjct: 2   INITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGSIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQI 122
           P+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D      S+++L +I
Sbjct: 62  PDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNSAGQISNEDLPRI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWFD 181
           E++MQ+I+  + P +++ ++ ++ARE+F  K + YK+E++E     E  +T+YRQGE+ D
Sbjct: 122 EEEMQKIVKENFPSIREEVTKDEAREIF--KNDPYKLELIEEHSEDEGGLTIYRQGEYVD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++  F L+ VAGAYWRG+S+  M+ RIYGTAW  +++L  YL   EE+
Sbjct: 180 LCRGPHVPSTGRIQ-IFHLLHVAGAYWRGNSDNAMMQRIYGTAWFDKKDLKNYLQMREEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+++ G G+ FW   G  I + L  Y+  +++   Y+ + TP +
Sbjct: 239 KERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVDKEVAAGYQHVYTPPI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHWD YR +MF        + D   F L+PMNCP H+ V+ H + SYRELP
Sbjct: 299 ASVELYKTSGHWDHYREDMFPPM----DMGDGEEFVLRPMNCPHHIEVYKHHVHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y+DF 
Sbjct: 355 IRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYEDFN 414

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
             +   +LS R      K   +D +W++A+ +++  LD +       ++     GE AFY
Sbjct: 415 LTEYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G++    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF 
Sbjct: 469 GPKLDIQVKTALGKEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMIHRGVISTMERFT 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IEN+KG  P WL+P Q  +  +++   V+YA E+A  L+   +  + D RNE + +K
Sbjct: 529 AILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAKKLRDRGVRADVDERNEKMQFK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           IR     KIP  +I GDKE  + ++ +RR+G   TQ VS+ D +
Sbjct: 589 IRASQTSKIPYQLIVGDKEMEDGTVNVRRYGQKETQTVSVDDFV 632


>gi|301794619|emb|CBW37067.1| threonyl-tRNA synthetase [Streptococcus pneumoniae INV104]
          Length = 647

 Score =  530 bits (1365), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 267/640 (41%), Positives = 406/640 (63%), Gaps = 23/640 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           I +TFPDG+I+ F    T  ++A+SIS SLAKKA+A   NGK+ D +  + E GSIEI+T
Sbjct: 2   INITFPDGAIREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGSIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQI 122
           P+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D      S+++L +I
Sbjct: 62  PDHGDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNTAGQISNEDLPRI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWFD 181
           E++MQ+I+  + P +++ ++ ++ARE+F  K + YK+E++E     E  +T+YRQGE+ D
Sbjct: 122 EEEMQKIVKENFPSIREEVTKDEAREIF--KNDPYKLELIEEHSEDEGGLTIYRQGEYVD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++  F L+ VAGAYWRG+S+  M+ RIYGTAW  +++L  YL   EE+
Sbjct: 180 LCRGPHVPSTGRIQ-IFHLLHVAGAYWRGNSDNAMMQRIYGTAWFDKKDLKNYLQMREEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+++ G G+ FW   G  I + L  Y+  +++   Y+ + TP +
Sbjct: 239 KERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVNKELASGYQHVYTPPL 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHWD Y+ +MF        + D   F L+PMNCP H+ VF H + SYRELP
Sbjct: 299 ASVELYKTSGHWDHYQEDMFPTM----DMGDGEEFVLRPMNCPHHIQVFKHHVHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y+DF 
Sbjct: 355 IRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYEDFN 414

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R      K   +D +W++A+ +++  LD +       ++     GE AFY
Sbjct: 415 LTDYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G++    TIQ+DF LP RF+  Y+ +  E   PVMIHR V  ++ERF 
Sbjct: 469 GPKLDIQIKTALGKEETLSTIQLDFLLPERFDLKYIGADGEDHRPVMIHRGVISTMERFT 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IEN+KG  P WL+P Q  +  +++   V+YA E+A  L+   +  + D RNE + +K
Sbjct: 529 AILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAKKLRDRGVRADVDERNEKMQFK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           IR     KIP  +I GDKE  + ++ +RR+G   TQ VS+
Sbjct: 589 IRASQTSKIPYQLIVGDKEMEDETVNVRRYGQKETQTVSV 628


>gi|71903081|ref|YP_279884.1| threonyl-tRNA synthetase [Streptococcus pyogenes MGAS6180]
 gi|123734122|sp|Q48US7|SYT_STRPM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|71802176|gb|AAX71529.1| threonyl-tRNA synthetase [Streptococcus pyogenes MGAS6180]
          Length = 647

 Score =  530 bits (1365), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 273/639 (42%), Positives = 405/639 (63%), Gaps = 23/639 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+TFPDG+++ F    T  D+AESIS+SLAKKA+A   N ++ D +  + E GSIEI+T
Sbjct: 2   IKITFPDGAVREFESGVTTFDIAESISKSLAKKALAGKFNDQLIDTTRAIEEDGSIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
           P+   +  V+RHS AH+ A+A + ++P + + +GP I +GFYYD D  E   S+++L +I
Sbjct: 62  PDHKDAYEVLRHSAAHLFAQAAKRLFPNLHLGVGPAIAEGFYYDTDNAEGQISNEDLPRI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +MQ+I+  + P +++ ++ E+A ELF  K + YKVE++    A   +T+YRQGE+ DL
Sbjct: 122 EAEMQKIVTENYPCIREEVTKEEALELF--KDDPYKVELINE-HAGAGLTVYRQGEFVDL 178

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG+++  F L+ VAGAYWRG+S+  M+ RIYGTAW  +++L  YL  LEE++
Sbjct: 179 CRGPHVPSTGRIQ-VFHLLNVAGAYWRGNSDNNMMQRIYGTAWFDKKDLKAYLTRLEEAK 237

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVL 300
           +RDHRKL +E+DLF I+++ G G+ FW   G  I +TL  Y+  K +   Y+ + TP + 
Sbjct: 238 ERDHRKLGKELDLFMISQEVGQGLPFWLPDGATIRRTLERYITDKELASGYQHVYTPPLA 297

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
              L++ SGHWD Y+ +MF V      + D   F L+PMNCP H+ V+ + ++SYRELP+
Sbjct: 298 SVELYKTSGHWDHYQEDMFPVM----DMGDGEEFVLRPMNCPHHIQVYKNHVRSYRELPI 353

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G ++R E SG+L GL RVR  T +D H+F T EQ+  E  +   LII +Y DF  
Sbjct: 354 RIAELGMMHRYEKSGALSGLQRVREMTLNDGHIFVTPEQIQEEFQRALQLIIDVYADFNL 413

Query: 421 EKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
                +LS R      K   +D +W++A++++K  LD +       ++     GE AFYG
Sbjct: 414 TDYRFRLSYRDPNDTRKYYDNDEMWENAQSMLKAALDEMG------VDYFEAEGEAAFYG 467

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK +  +K A+G +    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF  
Sbjct: 468 PKLDIQVKTALGNEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMIHRGVISTMERFTA 527

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKI 595
           I+IE +KG  P WL+P Q  V  I++ A ++YA E+A  L+   +  + D RNE + YKI
Sbjct: 528 ILIETYKGAFPTWLAPHQVTVIPISNEAHIDYAWEVAKTLRDRGVRADVDDRNEKMQYKI 587

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           R     KIP  +I GDKE  ++S+ +RR+GS  T   S+
Sbjct: 588 RASQTSKIPYQLIVGDKEMEDKSVNVRRYGSKATHTESV 626


>gi|307709563|ref|ZP_07646017.1| threonyl-tRNA synthetase [Streptococcus mitis SK564]
 gi|307619694|gb|EFN98816.1| threonyl-tRNA synthetase [Streptococcus mitis SK564]
          Length = 647

 Score =  530 bits (1365), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 266/644 (41%), Positives = 411/644 (63%), Gaps = 23/644 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I +TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  + ++GSIEI+T
Sbjct: 2   INITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITKDGSIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQI 122
           P+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D      S+++L +I
Sbjct: 62  PDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNTAGQISNEDLPRI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWFD 181
           E++MQ+I+  + P +++ ++ ++ARE+F  K + YK+E++E     E  +T+YRQGE+ D
Sbjct: 122 EEEMQKIVKENFPSIREEVTKDEAREIF--KNDPYKLELIEEHSEDEGGLTIYRQGEYVD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++  F L+ VAGAYWRG+S+  M+ RIYGTAW  +++L  YL   EE+
Sbjct: 180 LCRGPHVPSTGRIQ-IFHLLHVAGAYWRGNSDNAMMQRIYGTAWFDKKDLKNYLQMREEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+++ G G+ FW   G  I + L  Y+  +++   Y+ + TP +
Sbjct: 239 KERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVDKELASGYQHVYTPPL 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHWD Y+ +MF        + D   F L+PMNCP H+ VF H + SYRELP
Sbjct: 299 ASVELYKTSGHWDHYQEDMFPTM----DMGDGEEFVLRPMNCPHHIQVFKHHVHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y+DF 
Sbjct: 355 IRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYEDFN 414

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
             +   +LS R      K   +D +W++A+ +++  LD +       ++     GE AFY
Sbjct: 415 LTEYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G++    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF 
Sbjct: 469 GPKLDIQVKTALGKEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMIHRGVISTMERFT 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IEN+KG  P WL+P Q  +  +++   V+YA E+A  L+   +  + D RNE + +K
Sbjct: 529 AILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAKKLRDRGVRADVDERNEKMQFK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           IR     KIP  +I GDKE  + ++ +RR+G   TQ VS+ D +
Sbjct: 589 IRASQTSKIPYQLIVGDKEMEDGTVNVRRYGQKETQTVSVDDFV 632


>gi|328957059|ref|YP_004374445.1| threonine--tRNA ligase [Carnobacterium sp. 17-4]
 gi|328673383|gb|AEB29429.1| threonine--tRNA ligase [Carnobacterium sp. 17-4]
          Length = 645

 Score =  530 bits (1365), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 261/651 (40%), Positives = 412/651 (63%), Gaps = 22/651 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           S+I +TFPDG++K+FP+ ++  D+AESIS+ LAKKA+A   NG++ DL  P+   G IEI
Sbjct: 2   SEINITFPDGAVKSFPMGSSTKDIAESISKGLAKKALAGKFNGELVDLVRPLEVNGEIEI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           ITP+   +L ++RHS AH+MA A++ ++P+++  +GP I  GFYYD D E P + +++ +
Sbjct: 62  ITPDHEDALQILRHSTAHLMANALRRLYPDIKFGVGPAISTGFYYDTDSEAPITDEDIPK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE +M  I+  ++P +++ ++ E+A E+F  K + YKVE++ ++P  E +T+Y QG++ D
Sbjct: 122 IEAEMMAIVKENNPIVRKEVTREEALEIF--KDDPYKVELITALPESEKITVYDQGDFVD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG HV STG++ + FKL+ +AGAYWRG+S+  M+ R+YGTA+  +++L +++   EE+
Sbjct: 180 LCRGVHVPSTGRI-QVFKLLSLAGAYWRGNSDNKMMQRVYGTAFFDKKDLKEFIKMREEA 238

Query: 242 EKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           + RDHRKL +E+DLF I+ E GSG+ FW  KG  I +T+  Y+  R+I   Y+ + TP +
Sbjct: 239 KLRDHRKLGKELDLFMISPEVGSGLPFWLPKGATIRRTIERYIVDREISLGYQHVYTPIM 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            D +L++ SGHWD Y  +MF        + D     L+PMNCP H+ V+ + + SYRELP
Sbjct: 299 ADVNLYKTSGHWDHYHEDMFPPM----DMGDGEMLVLRPMNCPHHMMVYKNDVHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  T +D H F   +Q+  E  +   L++++Y DF 
Sbjct: 355 IRIAELGQMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIEEEFKRTLELMLAVYGDFN 414

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R     EK    D +W+ A+ ++K  +D ++      ++     GE AFY
Sbjct: 415 ITDYRFRLSYRDPNNTEKYYDDDGMWEKAQTMLKAAMDDME------LDYFEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH-PVMIHRAVFGSIERF 534
           GPK + ++K AIG +    TIQ+DF LP RF+  YV    E  H PV+IHR +  ++ERF
Sbjct: 469 GPKLDVLVKTAIGIEETLSTIQLDFLLPERFDLTYVGEDGENNHRPVVIHRGIVSTMERF 528

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINY 593
           +  +IE +KG  P WL+P+QA +  +      +YA EI   L+S  + ++ D RNE + Y
Sbjct: 529 VAYLIEEYKGAFPTWLAPVQATIIPVNLDMHTDYAYEIKKQLESIGMRVDVDERNEKMGY 588

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR    +KIP  ++ GD E  + ++ +R++G   T+ + L D I  ++ E
Sbjct: 589 KIRASQTQKIPYQLVVGDSEVQDNTVAVRKYGEKATETIGLNDYIEKVSSE 639


>gi|283470950|emb|CAQ50161.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ST398]
          Length = 645

 Score =  530 bits (1364), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 268/636 (42%), Positives = 404/636 (63%), Gaps = 21/636 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           I + FPDG+ K F    T  D+A+SIS  L KKAVA   NG++ DL++P+  +GSIEI+T
Sbjct: 4   INIQFPDGNKKAFDKGTTTEDIAQSISPGLRKKAVAGKFNGQLVDLTEPLETDGSIEIVT 63

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P    +L V+RHS AH+MA A++ ++  V+  +GP+IE GFYYDFD +Q  SSD+  QIE
Sbjct: 64  PGSEEALEVLRHSTAHLMAHAIKRLYGNVKFGVGPVIEGGFYYDFDIDQNISSDDFEQIE 123

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K M++I+  +    ++ +S ++A+ELF +  + YK+E++++IP  ENVTLY QG++ DLC
Sbjct: 124 KTMKQIVNENMKIERKVVSRDEAKELFSN--DEYKLELIDAIPEDENVTLYSQGDFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RG HV ST ++K+F KL+  AGAYWRGDSN  ML RIYGTA+  ++EL  +L  LEE ++
Sbjct: 182 RGVHVPSTAKIKEF-KLLSTAGAYWRGDSNNKMLQRIYGTAFFDKKELKAHLQMLEERKE 240

Query: 244 RDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLD 301
           RDHRK+ +E++LF  ++  G+G+  W   G  I + +  Y+  +++   Y+ + TP + +
Sbjct: 241 RDHRKIGKELELFTNSQLVGAGLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLAN 300

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             L++ SGHWD Y+ +MF     D+T     +  L+PMNCP H+ ++ +   SYRELP+R
Sbjct: 301 VDLYKTSGHWDHYQEDMFPPMQLDET----ESMVLRPMNCPHHMMIYANKPHSYRELPIR 356

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AE G+++R E SG++ GL RVRG T +D+H+F   +Q+  E  ++ N+II +YKDFGFE
Sbjct: 357 IAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVNMIIDVYKDFGFE 416

Query: 422 KIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
               +LS R     EK    D +W+ AEN++K   D +  S ++ I      GE AFYGP
Sbjct: 417 DYSFRLSYRDPEDKEKYFDDDDMWNKAENMLKEAADELGLSYEEAI------GEAAFYGP 470

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  +K A+G++    T Q+DF LP RF+  Y+    E   PV+IHR V  ++ERF+  
Sbjct: 471 KLDVQVKTAMGKEETLSTAQLDFLLPERFDLTYIGQDGEHHRPVVIHRGVVSTMERFVAF 530

Query: 538 MIENFKGNLPLWLSPIQA-IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           + E  KG  P WL+P Q  I+        +YA+++ + LKS  + +  D RNE + YKIR
Sbjct: 531 LTEETKGAFPTWLAPKQVQIIPVNIDLHYDYARQLQDELKSQGVRVSIDDRNEKMGYKIR 590

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
           E  ++KIP  I+ GDKE     + +R++GS   + V
Sbjct: 591 EAQMQKIPYQIVVGDKEVENNQVNVRQYGSQDQETV 626


>gi|298503373|ref|YP_003725313.1| threonyl-tRNA synthetase [Streptococcus pneumoniae TCH8431/19A]
 gi|298238968|gb|ADI70099.1| threonyl-tRNA synthetase [Streptococcus pneumoniae TCH8431/19A]
          Length = 660

 Score =  530 bits (1364), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 266/640 (41%), Positives = 406/640 (63%), Gaps = 23/640 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           I +TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  + E GSIEI+T
Sbjct: 15  INITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGSIEIVT 74

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQI 122
           P+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D      S+++L +I
Sbjct: 75  PDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNTAGQISNEDLPRI 134

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWFD 181
           E++MQ+I+  + P +++ ++ ++ARE+F  K + YK+E++E     E  +T+YRQGE+ D
Sbjct: 135 EEEMQKIVKENFPSIREEVTKDEAREIF--KNDPYKLELIEEHSEDEGGLTIYRQGEYVD 192

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++  F L+ VAGAYWRG+S+  M+ RIYGTAW  +++L  YL   EE+
Sbjct: 193 LCRGPHVPSTGRIQ-IFHLLHVAGAYWRGNSDNAMMQRIYGTAWFDKKDLKNYLQMREEA 251

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+++ G G+ FW   G  I + L  Y+  +++   Y+ + TP +
Sbjct: 252 KERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVNKELASGYQHVYTPPL 311

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHWD Y+ +MF        + D   F L+PMNCP H+ VF H + SYRELP
Sbjct: 312 ASVELYKTSGHWDHYQEDMFPTM----DMGDGEEFVLRPMNCPHHIQVFKHHVHSYRELP 367

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y+DF 
Sbjct: 368 IRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYEDFN 427

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R      K   +D +W++A+ +++  LD +       ++     GE AFY
Sbjct: 428 LTDYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAFY 481

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G++    TIQ+DF LP RF+  Y+ +  E   PVMIHR V  ++ERF 
Sbjct: 482 GPKLDIQIKTALGKEETLSTIQLDFLLPERFDLKYIGADGEDHRPVMIHRGVISTMERFT 541

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IEN+KG  P WL+P Q  +  +++   V+YA E+A  L+   +  + D RNE + +K
Sbjct: 542 AILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAKKLRDRGVRADVDERNEKMQFK 601

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           IR     KIP  +I GDKE  + ++ +RR+G   TQ VS+
Sbjct: 602 IRASQTSKIPYQLIVGDKEMEDETVNVRRYGQKETQTVSV 641


>gi|148994898|ref|ZP_01823919.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
 gi|148997679|ref|ZP_01825243.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
 gi|149006698|ref|ZP_01830384.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74]
 gi|149021279|ref|ZP_01835525.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
 gi|168483499|ref|ZP_02708451.1| threonyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
 gi|168487280|ref|ZP_02711788.1| threonyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00]
 gi|168488656|ref|ZP_02712855.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|168491490|ref|ZP_02715633.1| threonyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
 gi|168575182|ref|ZP_02721145.1| threonyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
 gi|169834472|ref|YP_001695022.1| threonyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
 gi|225859387|ref|YP_002740897.1| threonyl-tRNA synthetase [Streptococcus pneumoniae 70585]
 gi|225861459|ref|YP_002742968.1| threonyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
 gi|298229236|ref|ZP_06962917.1| threonyl-tRNA synthetase [Streptococcus pneumoniae str. Canada
           MDR_19F]
 gi|298254509|ref|ZP_06978095.1| threonyl-tRNA synthetase [Streptococcus pneumoniae str. Canada
           MDR_19A]
 gi|307068259|ref|YP_003877225.1| threonyl-tRNA synthetase [Streptococcus pneumoniae AP200]
 gi|307127841|ref|YP_003879872.1| threonyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
 gi|238688351|sp|B1I703|SYT_STRPI RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|254783538|sp|C1C8M1|SYT_STRP7 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|254783543|sp|C1CSP6|SYT_STRZT RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|147756178|gb|EDK63220.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
 gi|147761613|gb|EDK68577.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74]
 gi|147926966|gb|EDK78011.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
 gi|147930380|gb|EDK81364.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
 gi|168996974|gb|ACA37586.1| threonyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
 gi|172043101|gb|EDT51147.1| threonyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
 gi|183569836|gb|EDT90364.1| threonyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00]
 gi|183572780|gb|EDT93308.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|183574162|gb|EDT94690.1| threonyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
 gi|183578687|gb|EDT99215.1| threonyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
 gi|225720074|gb|ACO15928.1| threonyl-tRNA synthetase [Streptococcus pneumoniae 70585]
 gi|225727271|gb|ACO23122.1| threonyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
 gi|306409796|gb|ADM85223.1| Threonyl-tRNA synthetase [Streptococcus pneumoniae AP200]
 gi|306484903|gb|ADM91772.1| threonyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
 gi|327389816|gb|EGE88161.1| threonyl-tRNA synthetase [Streptococcus pneumoniae GA04375]
 gi|332072464|gb|EGI82947.1| threonyl-tRNA synthetase [Streptococcus pneumoniae GA17570]
 gi|332072798|gb|EGI83279.1| threonyl-tRNA synthetase [Streptococcus pneumoniae GA17545]
 gi|332073965|gb|EGI84443.1| threonyl-tRNA synthetase [Streptococcus pneumoniae GA41301]
 gi|332199661|gb|EGJ13736.1| threonyl-tRNA synthetase [Streptococcus pneumoniae GA41317]
 gi|332200192|gb|EGJ14265.1| threonyl-tRNA synthetase [Streptococcus pneumoniae GA47368]
          Length = 647

 Score =  530 bits (1364), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 266/640 (41%), Positives = 406/640 (63%), Gaps = 23/640 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           I +TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  + E GSIEI+T
Sbjct: 2   INITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGSIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQI 122
           P+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D      S+++L +I
Sbjct: 62  PDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNTAGQISNEDLPRI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWFD 181
           E++MQ+I+  + P +++ ++ ++ARE+F  K + YK+E++E     E  +T+YRQGE+ D
Sbjct: 122 EEEMQKIVKENFPSIREEVTKDEAREIF--KNDPYKLELIEEHSEDEGGLTIYRQGEYVD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++  F L+ VAGAYWRG+S+  M+ RIYGTAW  +++L  YL   EE+
Sbjct: 180 LCRGPHVPSTGRIQ-IFHLLHVAGAYWRGNSDNAMMQRIYGTAWFDKKDLKNYLQMREEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+++ G G+ FW   G  I + L  Y+  +++   Y+ + TP +
Sbjct: 239 KERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVNKELASGYQHVYTPPL 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHWD Y+ +MF        + D   F L+PMNCP H+ VF H + SYRELP
Sbjct: 299 ASVELYKTSGHWDHYQEDMFPTM----DMGDGEEFVLRPMNCPHHIQVFKHHVHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y+DF 
Sbjct: 355 IRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYEDFN 414

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R      K   +D +W++A+ +++  LD +       ++     GE AFY
Sbjct: 415 LTDYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G++    TIQ+DF LP RF+  Y+ +  E   PVMIHR V  ++ERF 
Sbjct: 469 GPKLDIQIKTALGKEETLSTIQLDFLLPERFDLKYIGADGEDHRPVMIHRGVISTMERFT 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IEN+KG  P WL+P Q  +  +++   V+YA E+A  L+   +  + D RNE + +K
Sbjct: 529 AILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAKKLRDRGVRADVDERNEKMQFK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           IR     KIP  +I GDKE  + ++ +RR+G   TQ VS+
Sbjct: 589 IRASQTSKIPYQLIVGDKEMEDETVNVRRYGQKETQTVSV 628


>gi|329733112|gb|EGG69449.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus 21193]
          Length = 644

 Score =  530 bits (1364), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 268/636 (42%), Positives = 403/636 (63%), Gaps = 21/636 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           I + FPDG+ K F    T  D+A+SIS  L KKAVA   NG++ DL+ P+  +GSIEI+T
Sbjct: 4   INIQFPDGNKKAFDKGTTTEDIAQSISPGLRKKAVAGKFNGQLVDLTKPLETDGSIEIVT 63

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P    +L V+RHS AH+MA A++ ++  V+  +GP+IE GFYYDFD +Q  SSD+  QIE
Sbjct: 64  PGSEEALEVLRHSTAHLMAHAIKRLYGNVKFGVGPVIEGGFYYDFDIDQNISSDDFEQIE 123

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K M++I+  +    ++ +S ++A+ELF +  + YK+E++++IP  ENVTLY QG++ DLC
Sbjct: 124 KTMKQIVNENMKIERKVVSRDEAKELFSN--DEYKLELIDAIPEDENVTLYSQGDFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RG HV ST ++K+F KL+  AGAYWRGDSN  ML RIYGTA+  ++EL  +L  LEE ++
Sbjct: 182 RGVHVPSTAKIKEF-KLLSTAGAYWRGDSNNKMLQRIYGTAFFDKKELKAHLQMLEERKE 240

Query: 244 RDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLD 301
           RDHRK+ +E++LF  ++  G+G+  W   G  I + +  Y+  +++   Y+ + TP + +
Sbjct: 241 RDHRKIGKELELFTNSQLVGAGLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLAN 300

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             L++ SGHWD Y+ +MF     D+T     +  L+PMNCP H+ ++ +   SYRELP+R
Sbjct: 301 VDLYKTSGHWDHYQEDMFPPMQLDET----ESMVLRPMNCPHHMMIYANKPHSYRELPIR 356

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AE G+++R E SG++ GL RVRG T +D+H+F   +Q+  E  ++ N+II +YKDFGFE
Sbjct: 357 IAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVNMIIDVYKDFGFE 416

Query: 422 KIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
               +LS R     EK    D +W+ AEN++K   D +  S ++ I      GE AFYGP
Sbjct: 417 DYSFRLSYRDPEDKEKYFDDDDMWNKAENMLKEAADELGLSYEEAI------GEAAFYGP 470

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  +K A+G++    T Q+DF LP RF+  Y+    E   PV+IHR V  ++ERF+  
Sbjct: 471 KLDVQVKTAMGKEETLSTAQLDFLLPERFDLTYIGQDGEHHRPVVIHRGVVSTMERFVAF 530

Query: 538 MIENFKGNLPLWLSPIQA-IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           + E  KG  P WL+P Q  I+        +YA+++ + LKS  + +  D RNE + YKIR
Sbjct: 531 LTEETKGAFPTWLAPKQVQIIPVNVDLHYDYARQLQDELKSQGVRVSIDDRNEKMGYKIR 590

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
           E  ++KIP  I+ GDKE     + +R++GS   + V
Sbjct: 591 EAQMQKIPYQIVVGDKEVENNQVNVRQYGSQDQETV 626


>gi|50913800|ref|YP_059772.1| threonyl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
 gi|68052904|sp|Q5XDC4|SYT_STRP6 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|50902874|gb|AAT86589.1| Threonyl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
          Length = 647

 Score =  530 bits (1364), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 272/639 (42%), Positives = 405/639 (63%), Gaps = 23/639 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+TFPDG+++ F    T  D+AES+S+SLAKKA+A   N ++ D +  + E GSIEI+T
Sbjct: 2   IKITFPDGAVREFESGVTTFDIAESLSKSLAKKALAGKFNDQLIDTTRAIEEDGSIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
           P+   +  V+RHS AH+ A+A + ++P + + +GP I +GFYYD D  E   S+++L +I
Sbjct: 62  PDHKDAYEVLRHSAAHLFAQAAKRLFPNLHLGVGPAIAEGFYYDTDNAEGQISNEDLPRI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +MQ+I+  + P +++ ++ E+A ELF  K + YKVE++    A   +T+YRQGE+ DL
Sbjct: 122 EAEMQKIVTENYPCIREEVTKEEALELF--KDDPYKVELINE-HAGAGLTVYRQGEFVDL 178

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG+++  F L+ VAGAYWRG+S+  M+ RIYGTAW  +++L  YL  LEE++
Sbjct: 179 CRGPHVPSTGRIQ-VFHLLNVAGAYWRGNSDNNMMQRIYGTAWFDKKDLKAYLTRLEEAK 237

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVL 300
           +RDHRKL +E+DLF I+++ G G+ FW   G  I +TL  Y+  K +   Y+ + TP + 
Sbjct: 238 ERDHRKLGKELDLFMISQEVGQGLPFWLPDGATIRRTLERYITDKELASGYQHVYTPPLA 297

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
              L++ SGHWD Y+ +MF V      + D   F L+PMNCP H+ V+ + ++SYRELP+
Sbjct: 298 SVELYKTSGHWDHYQEDMFPVM----DMGDGEEFVLRPMNCPHHIQVYKNHVRSYRELPI 353

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G ++R E SG+L GL RVR  T +D H+F T EQ+  E  +   LII +Y DF  
Sbjct: 354 RIAELGMMHRYEKSGALSGLQRVREMTLNDGHIFVTPEQIQEEFQRALQLIIDVYADFNL 413

Query: 421 EKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
                +LS R      K   +D +W++A++++K  LD +       ++     GE AFYG
Sbjct: 414 TDYRFRLSYRDPNDTHKYYDNDEMWENAQSMLKAALDEMG------VDYFEAEGEAAFYG 467

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK +  +K A+G +    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF  
Sbjct: 468 PKLDIQVKTALGNEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMIHRGVISTMERFTA 527

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKI 595
           I+IE +KG  P WL+P Q  V  I++ A ++YA E+A  L+   +  + D RNE + YKI
Sbjct: 528 ILIETYKGAFPTWLAPHQVTVIPISNEAHIDYAWEVAKTLRDRGVRADVDDRNEKMQYKI 587

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           R     KIP  +I GDKE  ++S+ +RR+GS  T   S+
Sbjct: 588 RTSQTSKIPYQLIVGDKEMEDKSVNVRRYGSKATHTESV 626


>gi|225855059|ref|YP_002736571.1| threonyl-tRNA synthetase [Streptococcus pneumoniae JJA]
 gi|237649181|ref|ZP_04523433.1| threonyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974]
 gi|237822258|ref|ZP_04598103.1| threonyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974M2]
 gi|254783541|sp|C1CFK0|SYT_STRZJ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|225723844|gb|ACO19697.1| threonyl-tRNA synthetase [Streptococcus pneumoniae JJA]
          Length = 647

 Score =  530 bits (1364), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 266/640 (41%), Positives = 406/640 (63%), Gaps = 23/640 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           I +TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  + E GSIEI+T
Sbjct: 2   INITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGSIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQI 122
           P+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D      S+++L +I
Sbjct: 62  PDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNTAGQISNEDLPRI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWFD 181
           E++MQ+I+  + P +++ ++ ++ARE+F  K + YK+E++E     E  +T+YRQGE+ D
Sbjct: 122 EEEMQKIVKENFPSIREEVTKDEAREIF--KNDPYKLELIEEHSEDEGGLTIYRQGEYVD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++  F L+ VAGAYWRG+S+  M+ RIYGTAW  +++L  YL   EE+
Sbjct: 180 LCRGPHVPSTGRIQ-IFHLLHVAGAYWRGNSDNAMMQRIYGTAWFEKKDLKNYLQMREEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+++ G G+ FW   G  I + L  Y+  +++   Y+ + TP +
Sbjct: 239 KERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVNKELASGYQHVYTPPL 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHWD Y+ +MF        + D   F L+PMNCP H+ VF H + SYRELP
Sbjct: 299 ASVELYKTSGHWDHYQEDMFPTM----DMGDGEEFVLRPMNCPHHIQVFKHHVHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y+DF 
Sbjct: 355 IRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYEDFN 414

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R      K   +D +W++A+ +++  LD +       ++     GE AFY
Sbjct: 415 LTDYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G++    TIQ+DF LP RF+  Y+ +  E   PVMIHR V  ++ERF 
Sbjct: 469 GPKLDIQIKTALGKEETLSTIQLDFLLPERFDLKYIGADGEDHRPVMIHRGVISTMERFT 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IEN+KG  P WL+P Q  +  +++   V+YA E+A  L+   +  + D RNE + +K
Sbjct: 529 AILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAKKLRDRGVRADVDERNEKMQFK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           IR     KIP  +I GDKE  + ++ +RR+G   TQ VS+
Sbjct: 589 IRASQTSKIPYQLIVGDKEMEDETVNVRRYGQKETQTVSV 628


>gi|262052254|ref|ZP_06024459.1| threonyl-tRNA synthetase 1 [Staphylococcus aureus 930918-3]
 gi|259159855|gb|EEW44894.1| threonyl-tRNA synthetase 1 [Staphylococcus aureus 930918-3]
          Length = 645

 Score =  529 bits (1363), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 268/636 (42%), Positives = 403/636 (63%), Gaps = 21/636 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           I + FPDG+ K F    T  D+A+SIS  L KKAVA   NG++ DL+ P+  +GSIEI+T
Sbjct: 4   INIQFPDGNKKAFDKGTTTEDIAQSISPGLRKKAVAGKFNGQLVDLTKPLETDGSIEIVT 63

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P    +L V+RHS AH+MA A++ ++  V+  +GP+IE GFYYDFD +Q  SSD+  QIE
Sbjct: 64  PGSEEALEVLRHSTAHLMAHAIKRLYGNVKFGVGPVIEGGFYYDFDIDQNISSDDFEQIE 123

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K M++I+  +    ++ +S ++A+ELF +  + YK+E++++IP  ENVTLY QG++ DLC
Sbjct: 124 KTMKQIVNENMKIERKVVSRDEAKELFSN--DEYKLELIDAIPEDENVTLYSQGDFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RG HV ST ++K+F KL+  AGAYWRGDSN  ML RIYGTA+  ++EL  +L  LEE ++
Sbjct: 182 RGVHVPSTAKIKEF-KLLSTAGAYWRGDSNNKMLQRIYGTAFFDKKELKAHLQMLEERKE 240

Query: 244 RDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLD 301
           RDHRK+ +E++LF  ++  G+G+  W   G  I + +  Y+  +++   Y+ + TP + +
Sbjct: 241 RDHRKIGKELELFTNSQLVGAGLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLAN 300

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             L++ SGHWD Y+ +MF     D+T     +  L+PMNCP H+ ++ +   SYRELP+R
Sbjct: 301 VDLYKTSGHWDRYQEDMFPPMQLDET----ESMVLRPMNCPHHMMIYANKPHSYRELPIR 356

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AE G+++R E SG++ GL RVRG T +D+H+F   +Q+  E  ++ N+II +YKDFGFE
Sbjct: 357 IAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVNMIIDVYKDFGFE 416

Query: 422 KIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
               +LS R     EK    D +W+ AEN++K   D +  S ++ I      GE AFYGP
Sbjct: 417 DYSFRLSYRDPEDKEKYFDDDDMWNKAENMLKEAADELGLSYEEAI------GEAAFYGP 470

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  +K A+G++    T Q+DF LP RF+  Y+    E   PV+IHR V  ++ERF+  
Sbjct: 471 KLDVQVKTAMGKEETLSTAQLDFLLPERFDLTYIGQDGEHHRPVVIHRGVVSTMERFVAF 530

Query: 538 MIENFKGNLPLWLSPIQA-IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           + E  KG  P WL+P Q  I+        +YA+++ + LKS  + +  D RNE + YKIR
Sbjct: 531 LTEETKGAFPTWLAPKQVQIIPVNVDLHYDYARQLQDELKSQGVRVSIDDRNEKMGYKIR 590

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
           E  ++KIP  I+ GDKE     + +R++GS   + V
Sbjct: 591 EAQMQKIPYQIVVGDKEVENNQVNVRQYGSQDQETV 626


>gi|298694953|gb|ADI98175.1| threonyl-tRNA synthetase 1 [Staphylococcus aureus subsp. aureus
           ED133]
 gi|323440773|gb|EGA98482.1| threonyl-tRNA synthetase [Staphylococcus aureus O11]
 gi|323442928|gb|EGB00551.1| threonyl-tRNA synthetase [Staphylococcus aureus O46]
          Length = 645

 Score =  529 bits (1363), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 268/636 (42%), Positives = 403/636 (63%), Gaps = 21/636 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           I + FPDG+ K F    T  D+A+SIS  L KKAVA   NG++ DL+ P+  +GSIEI+T
Sbjct: 4   INIQFPDGNKKAFDKGTTTEDIAQSISPGLRKKAVAGKFNGQLVDLTKPLETDGSIEIVT 63

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P    +L V+RHS AH+MA A++ ++  V+  +GP+IE GFYYDFD +Q  SSD+  QIE
Sbjct: 64  PGSEEALEVLRHSTAHLMAHAIKRLYGNVKFGVGPVIEGGFYYDFDIDQNISSDDFEQIE 123

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K M++I+  +    ++ +S ++A+ELF +  + YK+E++++IP  ENVTLY QG++ DLC
Sbjct: 124 KTMKQIVNENMKIERKVVSRDEAKELFSN--DEYKLELIDAIPEDENVTLYSQGDFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RG HV ST ++K+F KL+  AGAYWRGDSN  ML RIYGTA+  ++EL  +L  LEE ++
Sbjct: 182 RGVHVPSTAKIKEF-KLLSTAGAYWRGDSNNKMLQRIYGTAFFDKKELKAHLQMLEERKE 240

Query: 244 RDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLD 301
           RDHRK+ +E++LF  ++  G+G+  W   G  I + +  Y+  +++   Y+ + TP + +
Sbjct: 241 RDHRKIGKELELFTNSQLVGAGLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLAN 300

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             L++ SGHWD Y+ +MF     D+T     +  L+PMNCP H+ ++ +   SYRELP+R
Sbjct: 301 VDLYKTSGHWDHYQEDMFPPMQLDET----ESMVLRPMNCPHHMMIYANKPHSYRELPIR 356

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AE G+++R E SG++ GL RVRG T +D+H+F   +Q+  E  ++ N+II +YKDFGFE
Sbjct: 357 IAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVNMIIDVYKDFGFE 416

Query: 422 KIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
               +LS R     EK    D +W+ AEN++K   D +  S ++ I      GE AFYGP
Sbjct: 417 DYSFRLSYRDPEDKEKYFDDDDMWNKAENMLKEAADELGLSYEEAI------GEAAFYGP 470

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  +K A+G++    T Q+DF LP RF+  Y+    E   PV+IHR V  ++ERF+  
Sbjct: 471 KLDVQVKTAMGKEETLSTAQLDFLLPERFDLTYIGQDGEHHRPVVIHRGVVSTMERFVAF 530

Query: 538 MIENFKGNLPLWLSPIQA-IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           + E  KG  P WL+P Q  I+        +YA+++ + LKS  + +  D RNE + YKIR
Sbjct: 531 LTEETKGAFPTWLAPKQVQIIPVNVDLHYDYARQLQDELKSQGVRVSIDERNEKMGYKIR 590

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
           E  ++KIP  I+ GDKE     + +R++GS   + V
Sbjct: 591 EAQMQKIPYQIVVGDKEVENNQVNVRQYGSQDQETV 626


>gi|168493529|ref|ZP_02717672.1| threonyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
 gi|183576436|gb|EDT96964.1| threonyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
          Length = 647

 Score =  529 bits (1363), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 266/640 (41%), Positives = 406/640 (63%), Gaps = 23/640 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           I +TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  + E GSIEI+T
Sbjct: 2   INITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGSIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQI 122
           P+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D      S+++L +I
Sbjct: 62  PDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNTAGQISNEDLPRI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWFD 181
           E++MQ+I+  + P +++ ++ ++ARE+F  K + YK+E++E     E  +T+YRQGE+ D
Sbjct: 122 EEEMQKIVKENFPSIREEVTKDEAREIF--KNDPYKLELIEEHSEDEGGLTIYRQGEYVD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++  F L+ VAGAYWRG+S+  M+ RIYGTAW  +++L  YL   EE+
Sbjct: 180 LCRGPHVPSTGRIQ-IFHLLHVAGAYWRGNSDNAMMQRIYGTAWFDKKDLKNYLQMREEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+++ G G+ FW   G  I + L  Y+  +++   Y+ + TP +
Sbjct: 239 KERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELEHYIVNKELASGYQHVYTPPL 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHWD Y+ +MF        + D   F L+PMNCP H+ VF H + SYRELP
Sbjct: 299 ASVELYKTSGHWDHYQEDMFPTM----DMGDGEEFVLRPMNCPHHIQVFKHHVHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y+DF 
Sbjct: 355 IRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYEDFN 414

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R      K   +D +W++A+ +++  LD +       ++     GE AFY
Sbjct: 415 LTDYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G++    TIQ+DF LP RF+  Y+ +  E   PVMIHR V  ++ERF 
Sbjct: 469 GPKLDIQIKTALGKEETLSTIQLDFLLPERFDLKYIGADGEDHRPVMIHRGVISTMERFT 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IEN+KG  P WL+P Q  +  +++   V+YA E+A  L+   +  + D RNE + +K
Sbjct: 529 AILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAKKLRDRGVRADVDERNEKMQFK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           IR     KIP  +I GDKE  + ++ +RR+G   TQ VS+
Sbjct: 589 IRASQTSKIPYQLIVGDKEMEDETVNVRRYGQKETQTVSV 628


>gi|331266854|ref|YP_004326484.1| threonyl-tRNA synthetase [Streptococcus oralis Uo5]
 gi|326683526|emb|CBZ01144.1| threonyl-tRNA synthetase [Streptococcus oralis Uo5]
          Length = 647

 Score =  529 bits (1363), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 266/640 (41%), Positives = 408/640 (63%), Gaps = 23/640 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  + E GSIEI+T
Sbjct: 2   IKITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGSIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQI 122
           P+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D      S+++L +I
Sbjct: 62  PDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNTAGQISNEDLPRI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWFD 181
           E++MQ+I+  + P +++ ++ ++ARE+F  K + YK+E++E     E  +T+YRQGE+ D
Sbjct: 122 EEEMQKIVKENFPSIREEVTKDEAREIF--KNDPYKLELIEEHSEDEGGLTIYRQGEYVD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++  F L+ VAGAYWRG+S+  M+ RIYGTAW  +++L  YL   EE+
Sbjct: 180 LCRGPHVPSTGRIQ-IFHLLHVAGAYWRGNSDNAMMQRIYGTAWFDKKDLKNYLQMREEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+++ G G+ FW   G  I + L  Y+  +++   Y+ + TP +
Sbjct: 239 KERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVDKELASGYQHVYTPPL 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHWD Y+ +MF        + D   F L+PMNCP H+ VF H + SYRELP
Sbjct: 299 ASVELYKTSGHWDHYQEDMFPTM----DMGDGEEFVLRPMNCPHHIQVFKHHVHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y+DF 
Sbjct: 355 IRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYEDFN 414

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
             +   +LS R      K   +D +W++A+ +++  LD +       ++     GE AFY
Sbjct: 415 LNEYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G++    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF 
Sbjct: 469 GPKLDIQVKTALGKEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMIHRGVISTMERFT 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IEN+KG  P WL+P Q  +  +++   V+YA E+A  L+   +  + D RNE + +K
Sbjct: 529 AILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAKKLRDRGVRADVDERNEKMQFK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           IR     KIP  +I GDKE  + ++ +RR+G   TQ V +
Sbjct: 589 IRASQTSKIPYQLIVGDKEMEDGTVNVRRYGQKETQTVPV 628


>gi|182684576|ref|YP_001836323.1| threonyl-tRNA synthetase [Streptococcus pneumoniae CGSP14]
 gi|182629910|gb|ACB90858.1| threonyl-tRNA synthetase [Streptococcus pneumoniae CGSP14]
          Length = 660

 Score =  529 bits (1363), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 266/640 (41%), Positives = 406/640 (63%), Gaps = 23/640 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           I +TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  + E GSIEI+T
Sbjct: 15  INITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGSIEIVT 74

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQI 122
           P+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D      S+++L +I
Sbjct: 75  PDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNTAGQISNEDLPRI 134

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWFD 181
           E++MQ+I+  + P +++ ++ ++ARE+F  K + YK+E++E     E  +T+YRQGE+ D
Sbjct: 135 EEEMQKIVKENFPSIREEVTKDEAREIF--KNDPYKLELIEEHSEDEGGLTIYRQGEYVD 192

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++  F L+ VAGAYWRG+S+  M+ RIYGTAW  +++L  YL   EE+
Sbjct: 193 LCRGPHVPSTGRIQ-IFHLLHVAGAYWRGNSDNAMMQRIYGTAWFDKKDLKNYLQMREEA 251

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+++ G G+ FW   G  I + L  Y+  +++   Y+ + TP +
Sbjct: 252 KERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVNKELVSGYQHVYTPPL 311

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHWD Y+ +MF        + D   F L+PMNCP H+ VF H + SYRELP
Sbjct: 312 ASVELYKTSGHWDHYQEDMFPTM----DMGDGEEFVLRPMNCPHHIQVFKHHVHSYRELP 367

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y+DF 
Sbjct: 368 IRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYEDFN 427

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R      K   +D +W++A+ +++  LD +       ++     GE AFY
Sbjct: 428 LTDYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAFY 481

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G++    TIQ+DF LP RF+  Y+ +  E   PVMIHR V  ++ERF 
Sbjct: 482 GPKLDIQIKTALGKEETLSTIQLDFLLPERFDLKYIGADGEDHRPVMIHRGVISTMERFT 541

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IEN+KG  P WL+P Q  +  +++   V+YA E+A  L+   +  + D RNE + +K
Sbjct: 542 AILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAKKLRDRGVRADVDERNEKMQFK 601

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           IR     KIP  +I GDKE  + ++ +RR+G   TQ VS+
Sbjct: 602 IRASQTSKIPYQLIVGDKEMEDETVNVRRYGQKETQTVSV 641


>gi|21283355|ref|NP_646443.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
 gi|49483925|ref|YP_041149.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|49486509|ref|YP_043730.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57650554|ref|YP_186567.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
 gi|87161367|ref|YP_494324.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|148268163|ref|YP_001247106.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|150394230|ref|YP_001316905.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|151221788|ref|YP_001332610.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|161509896|ref|YP_001575555.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|221142567|ref|ZP_03567060.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           JKD6009]
 gi|253317174|ref|ZP_04840387.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           CF-Marseille]
 gi|253732334|ref|ZP_04866499.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253734533|ref|ZP_04868698.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|257425798|ref|ZP_05602222.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257428464|ref|ZP_05604862.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257431098|ref|ZP_05607475.1| threonyl-tRNA synthetase 1 [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257433781|ref|ZP_05610139.1| threonyl-tRNA synthetase 1 [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257436697|ref|ZP_05612741.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876]
 gi|257794068|ref|ZP_05643047.1| threonyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|258415772|ref|ZP_05682043.1| threonyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|258421991|ref|ZP_05684911.1| threonyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|258424099|ref|ZP_05686981.1| threonyl-tRNA synthetase [Staphylococcus aureus A9635]
 gi|258438251|ref|ZP_05689535.1| threonyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|258443709|ref|ZP_05692048.1| threonyl-tRNA synthetase [Staphylococcus aureus A8115]
 gi|258445920|ref|ZP_05694096.1| threonyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|258448399|ref|ZP_05696516.1| threonyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|258451803|ref|ZP_05699825.1| threonyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|258454120|ref|ZP_05702091.1| threonyl-tRNA synthetase/Ser-tRNA(Thr) hydrolase [Staphylococcus
           aureus A5937]
 gi|269203301|ref|YP_003282570.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98]
 gi|282893178|ref|ZP_06301412.1| threonyl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|282904254|ref|ZP_06312142.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|282908994|ref|ZP_06316812.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282911310|ref|ZP_06319112.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282914479|ref|ZP_06322265.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282919448|ref|ZP_06327183.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427]
 gi|282920223|ref|ZP_06327948.1| threonyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|282924825|ref|ZP_06332491.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101]
 gi|282927813|ref|ZP_06335424.1| threonyl-tRNA synthetase [Staphylococcus aureus A10102]
 gi|283958434|ref|ZP_06375885.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|284024731|ref|ZP_06379129.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 132]
 gi|293503557|ref|ZP_06667404.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           58-424]
 gi|293510572|ref|ZP_06669277.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809]
 gi|293537114|ref|ZP_06671794.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|294848704|ref|ZP_06789450.1| threonyl-tRNA synthetase [Staphylococcus aureus A9754]
 gi|295405993|ref|ZP_06815801.1| threonyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|295428254|ref|ZP_06820883.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|296274890|ref|ZP_06857397.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MR1]
 gi|297207604|ref|ZP_06924039.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|297245081|ref|ZP_06928958.1| threonyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|297590783|ref|ZP_06949421.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|300911686|ref|ZP_07129130.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
 gi|304380726|ref|ZP_07363395.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|38258392|sp|Q8NW68|SYT_STAAW RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|56749381|sp|Q6G8P3|SYT_STAAS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|56749410|sp|Q6GG23|SYT_STAAR RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|71153575|sp|Q5HF90|SYT_STAAC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|123735974|sp|Q2FG54|SYT_STAA3 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|172048941|sp|A6QHL6|SYT_STAAE RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|189083625|sp|A6U2F0|SYT_STAA2 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|189083626|sp|A5ITK7|SYT_STAA9 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|189083627|sp|A8Z2J8|SYT_STAAT RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|38492559|pdb|1NYQ|A Chain A, Structure Of Staphylococcus Aureus Threonyl-Trna
           Synthetase Complexed With An Analogue Of Threonyl
           Adenylate
 gi|38492560|pdb|1NYQ|B Chain B, Structure Of Staphylococcus Aureus Threonyl-Trna
           Synthetase Complexed With An Analogue Of Threonyl
           Adenylate
 gi|38492561|pdb|1NYR|A Chain A, Structure Of Staphylococcus Aureus Threonyl-Trna
           Synthetase Complexed With Atp
 gi|38492562|pdb|1NYR|B Chain B, Structure Of Staphylococcus Aureus Threonyl-Trna
           Synthetase Complexed With Atp
 gi|21204795|dbj|BAB95491.1| threonyl-tRNA synthetase 1 [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49242054|emb|CAG40753.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|49244952|emb|CAG43413.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57284740|gb|AAW36834.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
 gi|87127341|gb|ABD21855.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|147741232|gb|ABQ49530.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Staphylococcus
           aureus subsp. aureus JH9]
 gi|149946682|gb|ABR52618.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|150374588|dbj|BAF67848.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|160368705|gb|ABX29676.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|253723934|gb|EES92663.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253727474|gb|EES96203.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|257271492|gb|EEV03638.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257275305|gb|EEV06792.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257278046|gb|EEV08694.1| threonyl-tRNA synthetase 1 [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257281874|gb|EEV12011.1| threonyl-tRNA synthetase 1 [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257284048|gb|EEV14171.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876]
 gi|257788040|gb|EEV26380.1| threonyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|257839365|gb|EEV63838.1| threonyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|257842035|gb|EEV66464.1| threonyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|257845720|gb|EEV69752.1| threonyl-tRNA synthetase [Staphylococcus aureus A9635]
 gi|257848295|gb|EEV72286.1| threonyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|257851115|gb|EEV75058.1| threonyl-tRNA synthetase [Staphylococcus aureus A8115]
 gi|257855162|gb|EEV78101.1| threonyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|257858367|gb|EEV81252.1| threonyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|257860515|gb|EEV83341.1| threonyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|257863572|gb|EEV86329.1| threonyl-tRNA synthetase/Ser-tRNA(Thr) hydrolase [Staphylococcus
           aureus A5937]
 gi|262075591|gb|ACY11564.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98]
 gi|269941163|emb|CBI49550.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TW20]
 gi|282313191|gb|EFB43587.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101]
 gi|282317258|gb|EFB47632.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427]
 gi|282321660|gb|EFB51985.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282325005|gb|EFB55315.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282327258|gb|EFB57553.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282590323|gb|EFB95402.1| threonyl-tRNA synthetase [Staphylococcus aureus A10102]
 gi|282594571|gb|EFB99556.1| threonyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|282595872|gb|EFC00836.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|282764496|gb|EFC04622.1| threonyl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|283790583|gb|EFC29400.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|285817366|gb|ADC37853.1| Threonyl-tRNA synthetase [Staphylococcus aureus 04-02981]
 gi|290919959|gb|EFD97027.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|291095223|gb|EFE25488.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           58-424]
 gi|291466463|gb|EFF08984.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809]
 gi|294824730|gb|EFG41153.1| threonyl-tRNA synthetase [Staphylococcus aureus A9754]
 gi|294968990|gb|EFG45011.1| threonyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|295127654|gb|EFG57291.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|296887621|gb|EFH26519.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|297178161|gb|EFH37409.1| threonyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|297575669|gb|EFH94385.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|300887107|gb|EFK82308.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
 gi|302333348|gb|ADL23541.1| threonyl-tRNA synthetase 1 [Staphylococcus aureus subsp. aureus
           JKD6159]
 gi|302751509|gb|ADL65686.1| threonyl-tRNA synthetase 1 [Staphylococcus aureus subsp. aureus
           str. JKD6008]
 gi|304340725|gb|EFM06656.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|312437859|gb|ADQ76930.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH60]
 gi|312830061|emb|CBX34903.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ECT-R
           2]
 gi|315130684|gb|EFT86670.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus CGS03]
 gi|315195587|gb|EFU25974.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus CGS00]
 gi|315198621|gb|EFU28949.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus CGS01]
 gi|320140439|gb|EFW32293.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA131]
 gi|320143977|gb|EFW35746.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA177]
 gi|329314355|gb|AEB88768.1| Threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           T0131]
 gi|329727674|gb|EGG64130.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus 21172]
          Length = 645

 Score =  529 bits (1363), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 268/636 (42%), Positives = 403/636 (63%), Gaps = 21/636 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           I + FPDG+ K F    T  D+A+SIS  L KKAVA   NG++ DL+ P+  +GSIEI+T
Sbjct: 4   INIQFPDGNKKAFDKGTTTEDIAQSISPGLRKKAVAGKFNGQLVDLTKPLETDGSIEIVT 63

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P    +L V+RHS AH+MA A++ ++  V+  +GP+IE GFYYDFD +Q  SSD+  QIE
Sbjct: 64  PGSEEALEVLRHSTAHLMAHAIKRLYGNVKFGVGPVIEGGFYYDFDIDQNISSDDFEQIE 123

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K M++I+  +    ++ +S ++A+ELF +  + YK+E++++IP  ENVTLY QG++ DLC
Sbjct: 124 KTMKQIVNENMKIERKVVSRDEAKELFSN--DEYKLELIDAIPEDENVTLYSQGDFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RG HV ST ++K+F KL+  AGAYWRGDSN  ML RIYGTA+  ++EL  +L  LEE ++
Sbjct: 182 RGVHVPSTAKIKEF-KLLSTAGAYWRGDSNNKMLQRIYGTAFFDKKELKAHLQMLEERKE 240

Query: 244 RDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLD 301
           RDHRK+ +E++LF  ++  G+G+  W   G  I + +  Y+  +++   Y+ + TP + +
Sbjct: 241 RDHRKIGKELELFTNSQLVGAGLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLAN 300

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             L++ SGHWD Y+ +MF     D+T     +  L+PMNCP H+ ++ +   SYRELP+R
Sbjct: 301 VDLYKTSGHWDHYQEDMFPPMQLDET----ESMVLRPMNCPHHMMIYANKPHSYRELPIR 356

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AE G+++R E SG++ GL RVRG T +D+H+F   +Q+  E  ++ N+II +YKDFGFE
Sbjct: 357 IAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVNMIIDVYKDFGFE 416

Query: 422 KIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
               +LS R     EK    D +W+ AEN++K   D +  S ++ I      GE AFYGP
Sbjct: 417 DYSFRLSYRDPEDKEKYFDDDDMWNKAENMLKEAADELGLSYEEAI------GEAAFYGP 470

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  +K A+G++    T Q+DF LP RF+  Y+    E   PV+IHR V  ++ERF+  
Sbjct: 471 KLDVQVKTAMGKEETLSTAQLDFLLPERFDLTYIGQDGEHHRPVVIHRGVVSTMERFVAF 530

Query: 538 MIENFKGNLPLWLSPIQA-IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           + E  KG  P WL+P Q  I+        +YA+++ + LKS  + +  D RNE + YKIR
Sbjct: 531 LTEETKGAFPTWLAPKQVQIIPVNVDLHYDYARQLQDELKSQGVRVSIDDRNEKMGYKIR 590

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
           E  ++KIP  I+ GDKE     + +R++GS   + V
Sbjct: 591 EAQMQKIPYQIVVGDKEVENNQVNVRQYGSQDQETV 626


>gi|320547252|ref|ZP_08041545.1| threonine--tRNA ligase [Streptococcus equinus ATCC 9812]
 gi|320448140|gb|EFW88890.1| threonine--tRNA ligase [Streptococcus equinus ATCC 9812]
          Length = 697

 Score =  529 bits (1363), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 271/642 (42%), Positives = 413/642 (64%), Gaps = 23/642 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEI 61
           S +K+TFPDG+++ F    T  ++A+SIS SLAKKA+A   NG++ D +  + E GSIE+
Sbjct: 49  SMVKITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGELIDTTREITEDGSIEV 108

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELA 120
           +TP+   +L+V+RHS AH+ A+A + ++P++ + +GP IE+GFYYD D K    + ++L 
Sbjct: 109 VTPDHEDALSVLRHSAAHLFAQAAKRLFPDLCLGVGPAIENGFYYDTDNKSGQITDEDLP 168

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEW 179
           +IE++M++I+  + P +++ +S E+ARELF  K + YK+E++E     E  +T+Y QGE+
Sbjct: 169 RIEEEMKKIVKENLPCVRKEISIEEARELF--KNDPYKLELIEEHGEDEGGLTVYTQGEF 226

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV STG+++  F L+ VAGAYWRG+S+  M+ R+YGTAW  +++L  YL   +
Sbjct: 227 TDLCRGPHVPSTGRIQ-VFHLLNVAGAYWRGNSDNAMMQRVYGTAWFDKKDLKAYLKQRQ 285

Query: 240 ESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTP 297
           E+++RDHRKL +E+DLF I+++ G G+ FW   G  I +TL  Y+  +++   Y  + TP
Sbjct: 286 EAKERDHRKLGKELDLFMISQEVGQGLPFWLPDGATIRRTLERYIVDKEVASGYLHVYTP 345

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    L++ SGHWD YR +MF        + D   F L+PMNCP H+ V+ H + SYRE
Sbjct: 346 PLASVDLYKTSGHWDHYREDMFPTM----DMGDGEEFVLRPMNCPHHIQVYKHHVHSYRE 401

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+ +E  K   LII +Y+D
Sbjct: 402 LPIRIAEIGMMHRYEKSGALSGLQRVREMSLNDGHLFVTPEQIQDEFQKALQLIIDVYED 461

Query: 418 FGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           F       +LS R      K    D +W++A++++K  LD +       ++     GE A
Sbjct: 462 FNLTDYRFRLSLRDPKDTHKYYDDDEMWENAQSMLKAALDEMG------VDYFEAEGEAA 515

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  +K A+G +    TIQ+DF LP RF   YV +  E+  PVMIHR V  ++ER
Sbjct: 516 FYGPKLDIQVKTALGNEETLSTIQLDFLLPERFGLTYVGADGEEHRPVMIHRGVISTMER 575

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETIN 592
           F  I+IEN+KG  P WL+P Q  V  +++ A V+YA E+A LL+   + ++ D RNE + 
Sbjct: 576 FTAILIENYKGAFPTWLAPHQVTVIPVSNEAHVDYAWEVAKLLRDKGVRVDVDERNEKMQ 635

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
            KIR+   KKIP  +I GDKE +++++ +RR+GS  T   S+
Sbjct: 636 LKIRQSQTKKIPYQLIVGDKEMADKTVNVRRYGSKQTHTESI 677


>gi|306829065|ref|ZP_07462255.1| threonine--tRNA ligase [Streptococcus mitis ATCC 6249]
 gi|304428151|gb|EFM31241.1| threonine--tRNA ligase [Streptococcus mitis ATCC 6249]
          Length = 647

 Score =  529 bits (1363), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 267/644 (41%), Positives = 411/644 (63%), Gaps = 23/644 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  + E GSIEI+T
Sbjct: 2   IKITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGSIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQI 122
           P+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D      S+++L +I
Sbjct: 62  PDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNTAGQISNEDLPRI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWFD 181
           E++M++I+  + P +++ ++ ++ARE+F  K + YK+E++E     E  +T+YRQGE+ D
Sbjct: 122 EEEMKKIVKENFPSIREEVTKDEAREIF--KNDPYKLELIEEHSEDEGGLTIYRQGEYVD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++  F L+ VAGAYWRG+S+  M+ RIYGTAW  +++L  YL   EE+
Sbjct: 180 LCRGPHVPSTGRIQ-IFHLLHVAGAYWRGNSDNAMMQRIYGTAWFDKKDLKNYLQMREEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+++ G G+ FW   G  I + L  Y+  +++   Y+ + TP +
Sbjct: 239 KERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVDKELASGYQHVYTPPL 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHWD Y+ +MF        + D   F L+PMNCP H+ VF H + SYRELP
Sbjct: 299 ASVELYKTSGHWDHYQEDMFPTM----DMGDGEEFVLRPMNCPHHIQVFKHHVHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y+DF 
Sbjct: 355 IRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYEDFN 414

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
             +   +LS R      K   +D +W++A+ +++  LD +       ++     GE AFY
Sbjct: 415 LTEYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G++    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF 
Sbjct: 469 GPKLDIQVKTALGKEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMIHRGVISTMERFT 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IEN+KG  P WL+P Q  +  +++   V+YA E+A  L+   +  + D RNE + +K
Sbjct: 529 AILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAKKLRDCGVRADVDERNEKMQFK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           IR     KIP  +I GDKE  + ++ +RR+G   TQ VS+ D +
Sbjct: 589 IRASQTSKIPYQLIVGDKEMEDGTVNVRRYGQKETQTVSVDDFV 632


>gi|262282640|ref|ZP_06060408.1| threonyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
 gi|262261931|gb|EEY80629.1| threonyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
          Length = 647

 Score =  529 bits (1363), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 266/640 (41%), Positives = 409/640 (63%), Gaps = 23/640 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  + E GSIEI+T
Sbjct: 2   IKITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGSIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQI 122
           P+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D +    S+++L +I
Sbjct: 62  PDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNQAGQISNEDLPRI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWFD 181
           E++M++I+  + P +++ ++ ++ARE+F  K + YK+E++E     E  +T+YRQGE+ D
Sbjct: 122 EEEMKKIVKENFPSIREEVTKDEAREIF--KNDPYKLELIEEHSEDEGGLTIYRQGEYVD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++  F L+ VAGAYWRG+S+  M+ RIYGTAW  +++L  YL   EE+
Sbjct: 180 LCRGPHVPSTGRIQ-IFHLLHVAGAYWRGNSDNAMMQRIYGTAWFDKKDLKNYLQMREEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+++ G G+ FW   G  I + L  Y+  ++I   Y+ + TP +
Sbjct: 239 KERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVDKEIAAGYQHVYTPPL 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHWD YR +MF        + D   F L+PMNCP H+ VF H + SYRELP
Sbjct: 299 ASVELYKTSGHWDHYREDMFPTM----DMGDGEEFVLRPMNCPHHIQVFKHHVHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y+DF 
Sbjct: 355 IRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYEDFN 414

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
             +   +LS R      K   +D +W++A+ +++  LD +       ++     GE AFY
Sbjct: 415 LTEYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G++    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF 
Sbjct: 469 GPKLDIQVKTALGKEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMIHRGVISTMERFT 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IEN+KG  P WL+P Q  +  +++   V+YA E+A  L+   +  + D RNE + +K
Sbjct: 529 AILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAKKLRDRGVRADVDERNEKMQFK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           IR     KIP  +I GDKE  + ++ +RR+G   T  V++
Sbjct: 589 IRASQTSKIPYQLIVGDKEMEDGTVNVRRYGQKETHTVAV 628


>gi|307719284|ref|YP_003874816.1| threonyl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
 gi|306533009|gb|ADN02543.1| threonyl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
          Length = 578

 Score =  529 bits (1363), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 259/565 (45%), Positives = 367/565 (64%), Gaps = 16/565 (2%)

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIAR 132
           IRHS AHIMA+AV  ++PE + AIGP I+ GFYYDFD  +  + ++L +IE+ M++ I  
Sbjct: 9   IRHSAAHIMADAVLRLFPEAKFAIGPAIDTGFYYDFDLPRSLTPEDLEKIEELMRKTIEE 68

Query: 133 DSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTG 192
           D PF ++ +S E+ARELF  K + YK+EILE IP  E V++YR G + DLCRGPHV  TG
Sbjct: 69  DLPFEREVISREEARELF--KDQPYKLEILEEIPEGEEVSIYRHGTFVDLCRGPHVERTG 126

Query: 193 QVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAR 251
           Q+     KL+ +AGAYWRGD  RPML RIYGTAW+T +EL QYL  L+E EKRDHR+L +
Sbjct: 127 QINPDAVKLLSIAGAYWRGDERRPMLQRIYGTAWHTPKELRQYLEHLKEVEKRDHRRLGK 186

Query: 252 EMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSG 309
           E+DLF + E+ G G+I+WH KG +I   + ++ R + +   YE + TP +    LW+ SG
Sbjct: 187 ELDLFSVHEEAGPGLIYWHPKGARIRLEIENFWREQHLARGYEVLYTPHIGKAWLWETSG 246

Query: 310 HWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVY 369
           H   Y+ NM+A    D +      + +KPMNCP H+ ++   L+SYRELP+R AE G+VY
Sbjct: 247 HLSFYKENMYAPMEVDKS-----DYYIKPMNCPFHIMIYKTRLRSYRELPLRWAELGTVY 301

Query: 370 RNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
           R E SG LHGL+RVRGFTQDDAH+FCT EQ+ +E L+     + +++ FGF  +   LST
Sbjct: 302 RYERSGVLHGLLRVRGFTQDDAHIFCTPEQIEDEILETLRFSLFMWETFGFSDVKAYLST 361

Query: 430 RPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGR 489
           RPEK VG    W+ A   ++  ++      ++ ++  V  G GAFYGPK +  ++DA+GR
Sbjct: 362 RPEKSVGEPERWEQATGSLRKAIE------REGLDYEVDEGGGAFYGPKIDIKVRDALGR 415

Query: 490 DWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW 549
           +WQ  TIQ DFNLP RF+  YV++   +  P M+HRA+ GS+ERF GI+IE++ G  P+W
Sbjct: 416 EWQTSTIQFDFNLPERFDITYVDADGREKRPYMVHRALLGSLERFFGILIEHYGGAFPVW 475

Query: 550 LSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIIC 609
           L+P+Q +V  ++     YAQE+   L+   +  E D   + +N KIR+   +KIP  +I 
Sbjct: 476 LAPVQVVVIPVSDVFAGYAQEVVRALREAGVRAEADLSADRMNAKIRKAQQEKIPYAVIV 535

Query: 610 GDKEASERSIGIRRFGSTTTQKVSL 634
           G +E   R++ +R  G      V+L
Sbjct: 536 GQREQEGRTVSVRVRGGEQRNGVAL 560


>gi|319946565|ref|ZP_08020800.1| threonine--tRNA ligase [Streptococcus australis ATCC 700641]
 gi|319747311|gb|EFV99569.1| threonine--tRNA ligase [Streptococcus australis ATCC 700641]
          Length = 647

 Score =  529 bits (1362), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 266/640 (41%), Positives = 408/640 (63%), Gaps = 23/640 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  + E GSIEI+T
Sbjct: 2   IKITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGSIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQI 122
           P+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D +    S+++L +I
Sbjct: 62  PDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNQAGQISNEDLPRI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWFD 181
           E++MQ+I+  + P +++ ++ ++ARE+F  K + YK+E++E     E  +T+YRQGE+ D
Sbjct: 122 EEEMQKIVKENFPSIREEVTKDEAREIF--KNDPYKLELIEEHSEDEGGLTIYRQGEYVD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++  F L+ VAGAYWRG+S+  M+ RIYGTAW  +++L  YL   EE+
Sbjct: 180 LCRGPHVPSTGRIQ-IFHLLHVAGAYWRGNSDNAMMQRIYGTAWFDKKDLKNYLQMREEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+++ G G+ FW   G  I + L  Y+  +++   Y+ + TP +
Sbjct: 239 KERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVDKELASGYQHVYTPPL 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHWD Y+ +MF        + D   F L+PMNCP H+ VF H + SYRELP
Sbjct: 299 ASVELYKTSGHWDHYQEDMFPTM----DMGDGEEFVLRPMNCPHHIQVFKHHVHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y DF 
Sbjct: 355 IRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYGDFN 414

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
             +   +LS R      K   +D +W++A+ +++  LD +       ++     GE AFY
Sbjct: 415 LNEYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G++    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF 
Sbjct: 469 GPKLDIQVKTALGKEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMIHRGVISTMERFT 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IEN+KG  P WL+P Q  +  +++   V+YA E+A  L+   +  + D RNE + +K
Sbjct: 529 AILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAKKLRDRGVRADVDERNEKMQFK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           IR     KIP  +I GDKE  + ++ +RR+G   T  VS+
Sbjct: 589 IRASQTSKIPYQLIVGDKEMEDGTVNVRRYGQKETNTVSV 628


>gi|315924324|ref|ZP_07920547.1| threonine--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263]
 gi|315622395|gb|EFV02353.1| threonine--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263]
          Length = 644

 Score =  529 bits (1362), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 260/620 (41%), Positives = 387/620 (62%), Gaps = 13/620 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K+T  DG IK+F    +  ++A+S+S  LAKK +A  I+GK  DL   V  +  +  +T
Sbjct: 1   MKITLLDGDIKDFENGLSIYEMAKSLSMGLAKKVMAGMIDGKAVDLRTKVDHDCKVRFLT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D        HS +H+M +A++ +WP+ Q+ IGP +++GFYYD D E   + D+   IE
Sbjct: 61  FDDTEGKKAFWHSASHVMGQAIKRVWPDAQLTIGPAVDNGFYYDVDLEHAITPDDYPIIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M++I+  D P      S E+A    E + E YK E++E++P  E ++ Y QGEW DLC
Sbjct: 121 AEMKKIVKADYPIEYTVKSREEALAWAEKEHETYKTELIEALPEDETISFYGQGEWADLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+RSTGQ+K F K+M +AGAYW GD N  ML R+YG A+  +  L ++L  LEE++K
Sbjct: 181 AGPHIRSTGQIKAF-KIMSLAGAYWHGDENNKMLQRVYGVAFPKKSLLDEHLAKLEEAQK 239

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQ 302
           RDHRKL  ++DLF + +   G+ +W  KGWK+F TL+ + R +  K  Y+EI++PQ+   
Sbjct: 240 RDHRKLGPQLDLFFLDDTAPGMPYWLPKGWKLFNTLLEFWRDEHEKRGYQEISSPQINYN 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+QSGHWD Y+ NMF +  +++ I     + +KPMNCP  + V+    +SYR+LP+RL
Sbjct: 300 KLWRQSGHWDHYKDNMFVIPVSENEI-----YGVKPMNCPNAIVVYKRKTRSYRDLPLRL 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           ++   ++R E SG LHGL+RV+ F QDD+H F T++Q+++E  +I ++    Y  FG E 
Sbjct: 355 SDCDVLHRKEKSGQLHGLLRVQMFRQDDSHNFITEDQIYDEINEILDIADLFYGIFGLE- 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
              +LSTRP   +G  ALWD AE  +K +LD         +N G    +GAFYGPK + +
Sbjct: 414 YRPELSTRPADFMGDIALWDKAEAALKEILDKRYGEGGYDVNEG----DGAFYGPKIDIM 469

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+ R WQ GTIQVDF LP  F+  Y++   E   PVMIHR ++GS+ERFIG++IE+ 
Sbjct: 470 MKDALDRTWQMGTIQVDFQLPRNFDLTYMDKDGELKVPVMIHRVIYGSLERFIGLLIEST 529

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WLSP+Q  +  +     EYAQ IA+ L+ H + +E D R+  +  KI +   + 
Sbjct: 530 AGKFPFWLSPVQVGIVPVREFHNEYAQSIADQLRDHRIRVEVDDRDAQMGGKISKFRKEL 589

Query: 603 IPIIIICGDKEASERSIGIR 622
           +P I+I GDKE    ++ +R
Sbjct: 590 LPYILIVGDKEKEANAVSVR 609


>gi|326492063|dbj|BAJ98256.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326499331|dbj|BAK06156.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 667

 Score =  529 bits (1362), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 265/571 (46%), Positives = 376/571 (65%), Gaps = 18/571 (3%)

Query: 56  EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFS 115
           E  + + T E   +L  IRH+CAH+MA AVQ ++P  +V IGP I++GFYYDFD E P +
Sbjct: 82  EARVVLPTNESSENLLRIRHTCAHVMAMAVQKLFPNSKVTIGPWIDNGFYYDFDME-PLT 140

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
             +L +I+K+M  II R+ P +++ +S E+A++  ++  E YK+EILE I  +E +T+Y 
Sbjct: 141 DKDLKKIKKEMDRIIRRNLPLVREEVSREEAQKRIQALNEPYKLEILERI-KEEPITIYH 199

Query: 176 QGE-WFDLCRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQ 233
            GE W+DLC GPHV STG++ +K  +L  VAGAYWRGD N  ML RIYGTAW ++ +L  
Sbjct: 200 IGEEWWDLCAGPHVESTGKIQRKAVELESVAGAYWRGDENNQMLQRIYGTAWESEDQLKA 259

Query: 234 YLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTL-ISYMRRKIKDDY 291
           Y++F EE+++RDHR+L +++DLF I ED G G++FWH KG  I   L  S+ +  ++  Y
Sbjct: 260 YIHFKEEAKRRDHRRLGQDLDLFSIQEDAGGGLVFWHPKGAIIRHILEDSWKQTHLQRGY 319

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           + + TP V    LW+ SGH D Y+ NM+     +D       + L+PMNCP H+ V+   
Sbjct: 320 DLLYTPHVAKADLWKISGHIDFYKENMYNQMDVED-----EPYQLRPMNCPYHILVYKRK 374

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI 411
           L+SYR+LP+R+AE G+VYR E SG+LHGL RVRGFTQDDAH+FC ++Q+ +E   + +L 
Sbjct: 375 LQSYRDLPIRVAELGTVYRYELSGALHGLFRVRGFTQDDAHIFCLEDQIKDEIRGVLDLT 434

Query: 412 ISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
             I   FGF    V LSTRPEK VGSD +W+ A   +K  LD             +  G 
Sbjct: 435 EEILGQFGFRNYEVNLSTRPEKSVGSDDIWEKATIALKDALD------DKGWGYTIDEGG 488

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
           GAFYGPK +  ++DA+GR WQC T+QVDFNLP RF+  YV+SH+EK  P+MIHRA+ GS+
Sbjct: 489 GAFYGPKIDLKIEDALGRKWQCSTVQVDFNLPERFDITYVDSHTEKKRPIMIHRAILGSL 548

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           ERF GI+IEN+ G+ PLWL+P QA +  +T++ ++Y  E+A+ LKS  +  E     E +
Sbjct: 549 ERFFGILIENYAGDFPLWLAPTQARILPVTNNELQYCNEVASELKSRGIRAEV-CHGERL 607

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIR 622
              IR    +K+P++ + G KE   R++ IR
Sbjct: 608 PKLIRNAETQKVPLMAVVGPKEVEARTLTIR 638


>gi|321312429|ref|YP_004204716.1| threonyl-tRNA synthetase [Bacillus subtilis BSn5]
 gi|291485328|dbj|BAI86403.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. natto BEST195]
 gi|320018703|gb|ADV93689.1| threonyl-tRNA synthetase [Bacillus subtilis BSn5]
          Length = 643

 Score =  529 bits (1362), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 258/642 (40%), Positives = 411/642 (64%), Gaps = 20/642 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSI 59
           M   +K+TFPDG++K F    T  D+A SIS  L KK++A  +NGK  DL  P+ E G++
Sbjct: 1   MSDMVKITFPDGAVKEFAKGTTTEDIAASISPGLKKKSLAGKLNGKEIDLRTPINEDGTV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT      L ++RHS AH++A+A++ I+ +V+  +GP+IE+GFYYD + ++  + ++L
Sbjct: 61  EIITEGSEEGLQIMRHSTAHLLAQAIKRIYKDVKFGVGPVIENGFYYDVEMDEAITPEDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IEK+M++I+  + P +++ +S E+A+  F    +  K+E+L++IP  E V++Y QGE+
Sbjct: 121 PKIEKEMKKIVNANLPIVRKEVSREEAKARFAEIGDDLKLELLDAIPEGETVSIYEQGEF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRG HV STG++K+ FKL+ +AGAYWRGDS   ML R+YGTA+  + +L ++L  LE
Sbjct: 181 FDLCRGVHVPSTGKIKE-FKLLSLAGAYWRGDSKNQMLQRVYGTAFFKKADLEEHLRMLE 239

Query: 240 ESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTP 297
           E+++RDHRKL +E+ LF  ++  G G+  W  KG  I + +  Y+  ++I   YE + TP
Sbjct: 240 EAKERDHRKLGKELKLFANSQKVGQGLPLWLPKGATIRRVIERYIVDKEISLGYEHVYTP 299

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +  + L++ SGHWD Y+  MF     D+      T  L+PMNCP H+ ++   + SYRE
Sbjct: 300 VLGSKELYETSGHWDHYQEGMFPPMEMDN-----ETLVLRPMNCPHHMMIYKQDIHSYRE 354

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+ +E ++   LI  +Y+D
Sbjct: 355 LPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKDEFIRTVRLIQDVYED 414

Query: 418 FGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           FG      +LS R     EK    D +W+ A++++K  +D I +   +        GE A
Sbjct: 415 FGLSDYTFRLSYRDPEDTEKYFDDDEMWNKAQSMLKEAMDEIGHDYYE------AEGEAA 468

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  +K AIG++    T+Q+DF LP RF+  Y+    ++  PV+IHR V  ++ER
Sbjct: 469 FYGPKLDVQVKTAIGKEETLSTVQLDFLLPERFDLTYIGEDGKQHRPVVIHRGVVSTMER 528

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETIN 592
           F+  +IE  KG LP WL+P+Q  V  ++ +  ++YA+++   L+   L +E D R+E I 
Sbjct: 529 FVAFLIEEHKGALPTWLAPVQFQVIPVSPAVHLDYAKKVQERLQREGLRVEVDSRDEKIG 588

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           YKIRE  ++KIP +++ GD+EA   ++ +R++G   ++ +SL
Sbjct: 589 YKIREAQMQKIPYMLVVGDQEAENGAVNVRKYGEQNSETISL 630


>gi|169829542|ref|YP_001699700.1| threonyl-tRNA synthetase 1 [Lysinibacillus sphaericus C3-41]
 gi|168994030|gb|ACA41570.1| Threonyl-tRNA synthetase 1 [Lysinibacillus sphaericus C3-41]
          Length = 643

 Score =  529 bits (1362), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 263/642 (40%), Positives = 410/642 (63%), Gaps = 20/642 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSI 59
           M   IKLTFPDG++K F    +  DVA SIS  L KKA A  IN  + DL  P+ E  +I
Sbjct: 1   MSEMIKLTFPDGAVKEFVKGTSTDDVALSISPGLRKKAYAGKINDVLVDLKTPIEEDATI 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D  +L ++RHS AH+ A+A++ ++P+V++ IGP+I+ GFYYD D   P ++++L
Sbjct: 61  AIITQDDEEALEILRHSTAHLTAQAIKRLFPDVKLGIGPVIDGGFYYDIDSPTPITAEDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEK+M++IIA +    ++ +S  +A+ ++E   + YK+E+LE+IPA E V++Y QGE+
Sbjct: 121 PAIEKEMKKIIAENLEVERKNVSRAEAQAMYEEIGDEYKLELLEAIPADEQVSIYYQGEF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRG HV STG++++ FKL+ +AGAYWRG+S+  ML RIYGTA+  ++EL  +L  LE
Sbjct: 181 FDLCRGIHVPSTGKLRE-FKLLSLAGAYWRGNSDNKMLQRIYGTAFFKKEELKHHLQMLE 239

Query: 240 ESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTP 297
           E+++RDHRK+ +E++LF  ++  G G+  W   G  I + +  Y+  +++   Y+ + TP
Sbjct: 240 EAKERDHRKIGKELELFTTSQKVGQGLPLWLPNGATIRRVIERYIVDKELSLGYKHVYTP 299

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +  + L+Q SGHWD Y+ ++F     D+      T  ++PMNCP H+ V+ + + SYR 
Sbjct: 300 VLGSKELYQTSGHWDHYQDSIFPPMEMDN-----ETLIMRPMNCPHHMMVYKNSMHSYRS 354

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AE G+++R E SG++ GL RVRG T +DAH+F   +Q+  E  K+  LI+ +YKD
Sbjct: 355 LPLRIAELGTMHRYEMSGAVSGLQRVRGMTLNDAHIFVRPDQIKAEFQKVVQLILEVYKD 414

Query: 418 FGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           F       +LS R     EK    DA+W+ A++++K  +D +       ++     GE A
Sbjct: 415 FDLNDYSFRLSYRDPADTEKYFNDDAMWEKAQSMLKEAMDELG------LDYFEAEGEAA 468

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  +K AIG++    T+Q+DF LP RF+  YV    +   PV+IHR V  ++ER
Sbjct: 469 FYGPKLDVQVKTAIGKEETLSTVQLDFLLPERFDLSYVGEDGKPHRPVVIHRGVVSTMER 528

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETIN 592
           F+  +IE +KG  P WL+P+Q  V  +++ A  +YA++I   L +  L +E D R E + 
Sbjct: 529 FVAFLIEEYKGAFPTWLAPVQVEVIPVSNEAHFDYAKQIEEQLTAAGLRVEMDDREEKLG 588

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           YKIRE  +KKIP +++ GDKE   + + +RR+GS  ++ +S 
Sbjct: 589 YKIREAQMKKIPYMLVIGDKEVEAKGVNVRRYGSKDSETISF 630


>gi|15901467|ref|NP_346071.1| threonyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
 gi|111657539|ref|ZP_01408280.1| hypothetical protein SpneT_02001261 [Streptococcus pneumoniae
           TIGR4]
 gi|149011514|ref|ZP_01832761.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
 gi|303253984|ref|ZP_07340104.1| threonyl-tRNA synthetase [Streptococcus pneumoniae BS455]
 gi|303258557|ref|ZP_07344537.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
 gi|303262647|ref|ZP_07348587.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
 gi|303263586|ref|ZP_07349508.1| threonyl-tRNA synthetase [Streptococcus pneumoniae BS397]
 gi|303266970|ref|ZP_07352845.1| threonyl-tRNA synthetase [Streptococcus pneumoniae BS457]
 gi|303269866|ref|ZP_07355610.1| threonyl-tRNA synthetase [Streptococcus pneumoniae BS458]
 gi|22654131|sp|Q97PI4|SYT_STRPN RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|14973120|gb|AAK75711.1| threonyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
 gi|147764504|gb|EDK71435.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
 gi|301802334|emb|CBW35088.1| threonyl-tRNA synthetase [Streptococcus pneumoniae INV200]
 gi|302599072|gb|EFL66098.1| threonyl-tRNA synthetase [Streptococcus pneumoniae BS455]
 gi|302636203|gb|EFL66698.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
 gi|302640058|gb|EFL70513.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
 gi|302640601|gb|EFL71004.1| threonyl-tRNA synthetase [Streptococcus pneumoniae BS458]
 gi|302643487|gb|EFL73759.1| threonyl-tRNA synthetase [Streptococcus pneumoniae BS457]
 gi|302646624|gb|EFL76849.1| threonyl-tRNA synthetase [Streptococcus pneumoniae BS397]
          Length = 647

 Score =  528 bits (1361), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 266/640 (41%), Positives = 406/640 (63%), Gaps = 23/640 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           I +TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  + E GSIEI+T
Sbjct: 2   INITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGSIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQI 122
           P+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D      S+++L +I
Sbjct: 62  PDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNTAGQISNEDLPRI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWFD 181
           E++MQ+I+  + P +++ ++ ++ARE+F  K + YK+E++E     E  +T+YRQGE+ D
Sbjct: 122 EEEMQKIVKENFPSIREEVTKDEAREIF--KNDPYKLELIEEHSEDEGGLTIYRQGEYVD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++  F L+ VAGAYWRG+S+  M+ RIYGTAW  +++L  YL   EE+
Sbjct: 180 LCRGPHVPSTGRIQ-IFHLLHVAGAYWRGNSDNAMMQRIYGTAWFDKKDLKNYLQMREEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+++ G G+ FW   G  I + L  Y+  +++   Y+ + TP +
Sbjct: 239 KERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVNKELVSGYQHVYTPPL 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHWD Y+ +MF        + D   F L+PMNCP H+ VF H + SYRELP
Sbjct: 299 ASVELYKTSGHWDHYQEDMFPTM----DMGDGEEFVLRPMNCPHHIQVFKHHVHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y+DF 
Sbjct: 355 IRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYEDFN 414

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R      K   +D +W++A+ +++  LD +       ++     GE AFY
Sbjct: 415 LTDYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G++    TIQ+DF LP RF+  Y+ +  E   PVMIHR V  ++ERF 
Sbjct: 469 GPKLDIQIKTALGKEETLSTIQLDFLLPERFDLKYIGADGEDHRPVMIHRGVISTMERFT 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IEN+KG  P WL+P Q  +  +++   V+YA E+A  L+   +  + D RNE + +K
Sbjct: 529 AILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAKKLRDRGVRADVDERNEKMQFK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           IR     KIP  +I GDKE  + ++ +RR+G   TQ VS+
Sbjct: 589 IRASQTSKIPYQLIVGDKEMEDETVNVRRYGQKETQTVSV 628


>gi|251772034|gb|EES52606.1| threonyl-tRNA synthetase [Leptospirillum ferrodiazotrophum]
          Length = 587

 Score =  528 bits (1361), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 262/555 (47%), Positives = 360/555 (64%), Gaps = 14/555 (2%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           L  +RHS AH++A+AV+ ++P  QV IGP  E+GFYYDF  E+PFS ++L +IE++M+ I
Sbjct: 15  LMALRHSAAHVLAQAVKRLFPSAQVGIGPATEEGFYYDFRFERPFSPEDLEKIEEEMRRI 74

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
           IA D+P +++ LS E A ELFE   E +K+EIL SIPA+  +T+Y QGE+ DLCRGPH+ 
Sbjct: 75  IATDAPIVRRPLSREAAHELFEKTGEPFKLEILHSIPAEAEITVYDQGEFTDLCRGPHLP 134

Query: 190 STGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKL 249
            TGQ+    KL+  +GAYW+G    P L RIYGTA+ TQ EL  YL  LEE  +RDHRK+
Sbjct: 135 GTGQIGAV-KLLSSSGAYWKGVETNPSLQRIYGTAFPTQAELDAYLARLEEIRQRDHRKI 193

Query: 250 AREMDLFH-IAEDGSGVIFWHRKGWKIFQTLIS-YMRRKIKDDYEEINTPQVLDQHLWQQ 307
            +E   F  + E+G+G++ W  +G +I + +   +  R  +  Y+ + TP +    LW+Q
Sbjct: 194 GKEQGFFRTLDENGAGMVLWLPRGARIRRVIEEIWKTRHDRHGYQYVYTPHIARLDLWKQ 253

Query: 308 SGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGS 367
           SGHWD YR +MF+    + +      F LKPMNCP H+ +F   +KSYR+LPVRLAE G+
Sbjct: 254 SGHWDFYRESMFSPMEIEGS-----EFELKPMNCPFHILIFKEAVKSYRDLPVRLAELGT 308

Query: 368 VYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKL 427
           VYR E SG+LHGL+RVRGFTQDDAH+FC  E + +E  K+  L+  +   FGF    V L
Sbjct: 309 VYRYERSGTLHGLLRVRGFTQDDAHIFCRPEDIASEIGKVLTLVDEMLLPFGFTNRSVYL 368

Query: 428 STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAI 487
           STRPE  VGSD  W  A   ++   + +KN+    I   +  GEG FYGPK +    D +
Sbjct: 369 STRPEGSVGSDENWALATGALE---EALKNAG---IPYEIDPGEGVFYGPKIDMKFHDVL 422

Query: 488 GRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           GR WQ  TIQVDFNLP +F+  Y +S      P+MIHRA+ GS+ERF GI++E+FKG  P
Sbjct: 423 GRTWQLSTIQVDFNLPEKFDITYRDSSGNDVRPIMIHRALLGSVERFFGILVEHFKGAFP 482

Query: 548 LWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIII 607
           LWL+P Q  +  I    + YA++IA  L+   + + TDFRNE I  KIR+  + KIP + 
Sbjct: 483 LWLAPEQVTILPIADRHIPYARKIAETLEQEGVRVVTDFRNEKIGAKIRDAQLMKIPQMW 542

Query: 608 ICGDKEASERSIGIR 622
           + GD+EA + +I IR
Sbjct: 543 VLGDREAQDETISIR 557


>gi|225849423|ref|YP_002729587.1| threonyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225644143|gb|ACN99193.1| threonyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 641

 Score =  528 bits (1361), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 261/614 (42%), Positives = 401/614 (65%), Gaps = 19/614 (3%)

Query: 36  KKAVAVAINGKVCDLSDPVRE-GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE--V 92
           K  +     G++ D+  P+++ GS++++T +DP SL ++RHS AHIMA+A++ I+ +  V
Sbjct: 33  KDVIGGKFEGEIIDVHTPIKKSGSLKLLTKKDPESLEILRHSLAHIMAQALKEIYGDENV 92

Query: 93  QVAIGPIIEDGFYYDFDKEQPFSSDE-LAQIEKKMQEIIARDSPFLKQYLSHEKARELFE 151
            + IGP  E+GFYYD + E    +DE L +IE+KM+EII +     +  L  E+A + FE
Sbjct: 93  HLGIGPTTENGFYYDVEIEGVRLTDEDLPKIEEKMKEIIKKGYQIERYELPREEAVKFFE 152

Query: 152 SKKEAYKVEILE-SIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRG 210
            KKE YK++I++ +IP  E ++LY+QG++ DLCRGPH+ ST +   F KL+ V+GAYWRG
Sbjct: 153 EKKEIYKIDIIKHNIPEGEPISLYKQGDFVDLCRGPHLPSTDKAGAF-KLISVSGAYWRG 211

Query: 211 DSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWH 269
               PML RIYG A+ + +EL  YL  LEE++KRDHRK+ +E++LF I E+ G G+  W 
Sbjct: 212 KETNPMLQRIYGVAFWSDKELKDYLNMLEEAKKRDHRKIGKELELFMIDEEVGGGLAIWL 271

Query: 270 RKGWKIFQTL-ISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTI 328
            KG  I + +  ++    +K  Y+ + TP V  +HLWQ SGH   Y+ NM+     ++  
Sbjct: 272 PKGAIIRKEIEDAWKEEHLKRGYQLVYTPHVGKEHLWQTSGHLSFYQENMYPRMQIEE-- 329

Query: 329 KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQ 388
                + +KPMNCP HV ++    +SY+ELP+RLAE G+VYR E SG+LHGLMRVRGFTQ
Sbjct: 330 ---EGYYVKPMNCPFHVEIYKSKQRSYKELPIRLAELGTVYRYERSGALHGLMRVRGFTQ 386

Query: 389 DDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIM 448
           DDAH+ C ++Q+ +E   + N  +   K +GF++  + LSTRPEK VG D +W+ A   +
Sbjct: 387 DDAHIICREDQVEDEIRDVLNFALDTLKSYGFDEFEIYLSTRPEKSVGDDRMWEVATQSL 446

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
           +  +++        I+  +  G GAFYGPK +  +KDAIGR WQC TIQ DFNLP RF+ 
Sbjct: 447 RKAIESTG------IDYKIDEGGGAFYGPKIDVKIKDAIGRMWQCSTIQFDFNLPQRFDM 500

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYA 568
           +Y+   +++  P MIHRA+FGSIERFIG+++E++ G LP+WLSP+Q  +  I    +++A
Sbjct: 501 YYIGEDNQRHRPYMIHRAIFGSIERFIGVLLEHYAGFLPVWLSPVQVKIIPIADKHLDFA 560

Query: 569 QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
            ++ ++L  + + +E D R+E +N KIR+  ++KIP +++ GDKE    S+ +R   S  
Sbjct: 561 NKVKDILLQNKVRVEVDDRSERMNKKIRDAELQKIPFMLVIGDKEVENNSVAVREKASGK 620

Query: 629 TQKVSLLDAIPILT 642
           T+ +++ + +  +T
Sbjct: 621 TESMTVDNFVKKIT 634


>gi|325478873|gb|EGC81983.1| threonine--tRNA ligase [Anaerococcus prevotii ACS-065-V-Col13]
          Length = 640

 Score =  528 bits (1361), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 264/643 (41%), Positives = 396/643 (61%), Gaps = 17/643 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           I +  PDGS K +       DV + IS  L + AV   +NG+V   ++P+ E    +++ 
Sbjct: 2   INIKLPDGSNKEYESGVLVGDVTKDISMGLFRAAVGAVVNGRVMGFAEPIEEDCDFKVVK 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D     +  H+ +H+MA A++ ++P+ + AIGP I+DGFYYD + +  F  ++L +IE
Sbjct: 62  FDDKEGKEIFWHTSSHVMAAAIKGLYPDTKFAIGPAIDDGFYYDMELDHRFVPEDLEKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF-DL 182
           KKM EI  RD    +  +S ++A E+FE + + YKVE++  +   E +TLY+ G+ F DL
Sbjct: 122 KKMLEIAKRDLKLERIEISRDEALEMFEKEGQDYKVELINDLAEDELITLYKMGDAFTDL 181

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ ST Q+K   K+  +AGAYWRGDS+R ML RIYG  +   ++L +Y    +E E
Sbjct: 182 CRGPHLLSTKQIKAV-KIKTIAGAYWRGDSDRQMLQRIYGITFEKAKQLEEYEELQKEIE 240

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLD 301
           KRDHRK+ REM+LF   E+G G  F+H  G  +   L+ +    + ++ Y EI TP +L+
Sbjct: 241 KRDHRKIGREMNLFAFHEEGPGFPFFHPNGMILMNELLGWWTDVLNENGYGEIKTPLILN 300

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW +SGHWD Y+ NM+  +       D   +A+KPMNCPG V  +     SYR+LP+R
Sbjct: 301 EALWHRSGHWDHYKENMYFTEI------DGEAYAVKPMNCPGSVLTYAANQHSYRDLPIR 354

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAE+G V+R+E SG+LHGL RVR FTQDDAHV+CT  Q+  E  ++ +L   +Y  FGF 
Sbjct: 355 LAEYGQVHRHELSGTLHGLFRVRTFTQDDAHVYCTPNQIKEEVYRMIDLADLLYSTFGF- 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
           K  ++LSTRP+  +G    WD AE  +K  L+  +   +  IN G    +GAFYGPK ++
Sbjct: 414 KYTIELSTRPDDFMGDIKDWDFAEEQLKKALE--ERGIEYEINPG----DGAFYGPKIDF 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L DA  R+WQCGTIQ+DF LP  F+  Y++ + EK  PVM+HRA+ GSIERFIG++ E+
Sbjct: 468 HLLDAAKREWQCGTIQLDFQLPQNFDLTYIDENGEKQRPVMLHRALLGSIERFIGVLTEH 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           F G  PLWL+P Q  +  ++   ++YA+E+   +K     +  D+RNE + YKIR+  + 
Sbjct: 528 FAGRFPLWLNPQQVEIIPVSDKFIDYAEELKQKIKEAGFRVNIDYRNEGVGYKIRQAQLM 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +   +++ G+KE +   + +R      T  VSL + I  +++E
Sbjct: 588 RTNYMLVVGEKEETSGKLTVRNRDGEETPDVSLDEFIEKISEE 630


>gi|94989937|ref|YP_598037.1| threonyl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
 gi|123258050|sp|Q1JI30|SYT_STRPD RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|94543445|gb|ABF33493.1| Threonyl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
          Length = 647

 Score =  528 bits (1361), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 273/639 (42%), Positives = 404/639 (63%), Gaps = 23/639 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+TFPDG+++ F    T  D+AESIS+SLAKKA+A   N ++ D +  + E GSIEI+T
Sbjct: 2   IKITFPDGAVREFESGVTTFDIAESISKSLAKKALAGKFNDQLIDTTRAIEEDGSIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
           P+   +  V+RHS AH+ A+A + ++P + + +GP I +GFYYD D  E   S+++L  I
Sbjct: 62  PDHKDAYEVLRHSAAHLFAQAAKRLFPNLHLGVGPAIAEGFYYDTDNAEGQISNEDLPCI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +MQ+I+  + P +++ ++ E+A ELF  K + YKVE++    A   +T+YRQGE+ DL
Sbjct: 122 EAEMQKIVTENYPCIREEVTKEEALELF--KDDPYKVELINE-HAGAGLTVYRQGEFVDL 178

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG+++  F L+ VAGAYWRG+S+  M+ RIYGTAW  +++L  YL  LEE++
Sbjct: 179 CRGPHVPSTGRIQ-VFHLLNVAGAYWRGNSDNNMMQRIYGTAWFDKKDLKAYLTRLEEAK 237

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVL 300
           +RDHRKL +E+DLF I+++ G G+ FW   G  I +TL  Y+  K +   Y+ + TP + 
Sbjct: 238 ERDHRKLGKELDLFMISQEVGQGLPFWLPDGATIRRTLERYITDKELASGYQHVYTPPLA 297

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
              L++ SGHWD Y+ +MF V      + D   F L+PMNCP H+ V+ + ++SYRELP+
Sbjct: 298 SVELYKTSGHWDHYQEDMFPVM----DMGDGEEFVLRPMNCPHHIQVYKNHVRSYRELPI 353

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G ++R E SG+L GL RVR  T +D H+F T EQ+  E  +   LII +Y DF  
Sbjct: 354 RIAELGMMHRYEKSGALSGLQRVREMTLNDGHIFVTPEQIQEEFQRALQLIIDVYADFNL 413

Query: 421 EKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
                +LS R      K   +D +W++A++++K  LD +       ++     GE AFYG
Sbjct: 414 TDYRFRLSYRDPNDTHKYYDNDEMWENAQSMLKAALDEMD------VDYFEAEGEAAFYG 467

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK +  +K A+G +    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF  
Sbjct: 468 PKLDIQVKTALGNEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMIHRGVISTMERFTA 527

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKI 595
           I+IE +KG  P WL+P Q  V  I++ A ++YA E+A  L+   +  + D RNE + YKI
Sbjct: 528 ILIETYKGAFPTWLAPHQVTVIPISNEAHIDYAWEVAKTLRDRGVRADVDDRNEKMQYKI 587

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           R     KIP  +I GDKE  ++S+ +RR+GS  T   S+
Sbjct: 588 RASQTSKIPYQLIVGDKEMEDKSVNVRRYGSKATHTESV 626


>gi|282916943|ref|ZP_06324701.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139]
 gi|283770747|ref|ZP_06343639.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
 gi|282319430|gb|EFB49782.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139]
 gi|283460894|gb|EFC07984.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
          Length = 645

 Score =  528 bits (1361), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 268/636 (42%), Positives = 402/636 (63%), Gaps = 21/636 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           I + FPDG+ K F    T  D+A+SIS  L KKAVA   NG++ DL+ P+  +GSIEI+T
Sbjct: 4   INIQFPDGNKKAFDKGTTTEDIAQSISPGLRKKAVAGKFNGQLVDLTKPLETDGSIEIVT 63

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P    +L V+RHS AH+MA A++ ++  V+  +GP+IE GFYYDFD +Q  SSD+  QIE
Sbjct: 64  PGSEEALEVLRHSTAHLMAHAIKRLYGNVKFGVGPVIEGGFYYDFDIDQNISSDDFEQIE 123

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K M++I+  +    ++ +S ++A+ELF +  + YK+E++++IP  ENVTLY QG++ DLC
Sbjct: 124 KTMKQIVNENMKIERKVVSRDEAKELFSN--DEYKLELIDAIPEDENVTLYSQGDFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RG HV ST ++K+F KL+  AGAYWRGDSN  ML RIYGTA+  + EL  +L  LEE ++
Sbjct: 182 RGVHVPSTAKIKEF-KLLSTAGAYWRGDSNNKMLQRIYGTAFFDKNELKAHLQMLEERKE 240

Query: 244 RDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLD 301
           RDHRK+ +E++LF  ++  G+G+  W   G  I + +  Y+  +++   Y+ + TP + +
Sbjct: 241 RDHRKIGKELELFTNSQLVGAGLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLAN 300

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             L++ SGHWD Y+ +MF     D+T     +  L+PMNCP H+ ++ +   SYRELP+R
Sbjct: 301 VDLYKTSGHWDHYQEDMFPPMQLDET----ESMVLRPMNCPHHMMIYANKPHSYRELPIR 356

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AE G+++R E SG++ GL RVRG T +D+H+F   +Q+  E  ++ N+II +YKDFGFE
Sbjct: 357 IAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVNMIIDVYKDFGFE 416

Query: 422 KIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
               +LS R     EK    D +W+ AEN++K   D +  S ++ I      GE AFYGP
Sbjct: 417 DYSFRLSYRDPEDKEKYFDDDDMWNKAENMLKEAADELGLSYEEAI------GEAAFYGP 470

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  +K A+G++    T Q+DF LP RF+  Y+    E   PV+IHR V  ++ERF+  
Sbjct: 471 KLDVQVKTAMGKEETLSTAQLDFLLPERFDLTYIGQDGEHHRPVVIHRGVVSTMERFVAF 530

Query: 538 MIENFKGNLPLWLSPIQA-IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           + E  KG  P WL+P Q  I+        +YA+++ + LKS  + +  D RNE + YKIR
Sbjct: 531 LTEETKGAFPTWLAPKQVQIIPVNVDLHYDYARQLQDELKSQGVRVSIDDRNEKMGYKIR 590

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
           E  ++KIP  I+ GDKE     + +R++GS   + V
Sbjct: 591 EAQMQKIPYQIVVGDKEVENNQVNVRQYGSQDQETV 626


>gi|157693298|ref|YP_001487760.1| threonyl-tRNA synthetase [Bacillus pumilus SAFR-032]
 gi|157682056|gb|ABV63200.1| threonine--tRNA ligase [Bacillus pumilus SAFR-032]
          Length = 646

 Score =  528 bits (1361), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 265/645 (41%), Positives = 416/645 (64%), Gaps = 23/645 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSI 59
           M   I+LTFPDG++K F   AT  D+A SIS  L KKA+A  +NGK  DL  P+ E G+I
Sbjct: 1   MSEQIQLTFPDGAVKEFDKTATTEDIAASISPGLKKKALAGKLNGKEIDLRTPLLESGTI 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE---VQVAIGPIIEDGFYYDFDKEQPFSS 116
           EIIT +   +L ++RHS AH++A+A++ ++ +   VQ  +GP+IE+GFYYD D +   + 
Sbjct: 61  EIITDKSDEALDIMRHSTAHLLAQAIKRLYGKEHHVQFGVGPVIENGFYYDVDIDVAITP 120

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
           ++L +IEK+M++II  + P  +  +S E A++ FE+  +  K+E+LE+IP  E VT+Y Q
Sbjct: 121 EDLPKIEKEMKKIINSNLPIERIEVSREDAKKRFEAIGDQLKLELLEAIPEGEAVTIYEQ 180

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           GE+FDLCRG H+ STG++K+ FKL+ +AGAYWRGDSN  ML RIYGTA+ ++ +L ++L 
Sbjct: 181 GEFFDLCRGIHLPSTGKIKE-FKLLSLAGAYWRGDSNNQMLQRIYGTAFFSKDDLNEHLR 239

Query: 237 FLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEI 294
            LEE+++RDHRKL +E+ LF  ++  G G+  W  KG  I + +  Y+  ++++  YE +
Sbjct: 240 LLEEAKERDHRKLGKELKLFANSQKVGQGLPLWLPKGATIRRVIERYIVDKEVRLGYEHV 299

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
            TP + +  L++ SGHW  Y+ +MF V   D+         L+PMNCP H+ ++ +   S
Sbjct: 300 YTPVLANVELYKTSGHWAHYQEDMFPVMEMDN-----EDLVLRPMNCPHHMMIYKNEPHS 354

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YRELP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+ +E ++   LI  +
Sbjct: 355 YRELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKDEFIRTVRLIEEV 414

Query: 415 YKDFGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
           Y+DFG      +LS R     EK    DA+W+ A++++K  +D + +   +        G
Sbjct: 415 YQDFGLNDYTFRLSYRDPEDTEKYFDDDAMWNKAQSMLKDAMDELGHDYYE------AEG 468

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           E AFYGPK +  +K A+G++    T+Q+DF LP RF+  Y+    +   PV+IHR V  +
Sbjct: 469 EAAFYGPKLDVQVKTALGKEETLSTVQLDFLLPERFDLTYIGEDGKHHRPVVIHRGVVST 528

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNE 589
           +ERF+  +IE +KG LP WL+P+Q  V  ++ S  ++YA+++   L+   L +E D R+E
Sbjct: 529 MERFVAFLIEEYKGALPTWLAPVQFQVIPVSPSVHLDYAKKVQERLQLEGLRVELDSRDE 588

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
            I YKIRE  ++KIP +++ GD+EA   ++ +R++G   ++ + L
Sbjct: 589 KIGYKIREAQMQKIPYMLVVGDQEAENGAVNVRKYGEQDSETMDL 633


>gi|16079947|ref|NP_390773.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221310836|ref|ZP_03592683.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221315161|ref|ZP_03596966.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           NCIB 3610]
 gi|221324361|ref|ZP_03605655.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           SMY]
 gi|135175|sp|P18255|SYT1_BACSU RecName: Full=Threonyl-tRNA synthetase 1; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|143766|gb|AAA22864.1| (thrSv) (EC 6.1.1.3) [Bacillus subtilis]
 gi|1769999|emb|CAA99608.1| threonyl-tRNA-synthetase [Bacillus subtilis]
 gi|2293284|gb|AAC00362.1| threonine tRNA synthetase [Bacillus subtilis]
 gi|2635360|emb|CAB14855.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
          Length = 643

 Score =  528 bits (1361), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 258/642 (40%), Positives = 411/642 (64%), Gaps = 20/642 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSI 59
           M   +K+TFPDG++K F    T  D+A SIS  L KK++A  +NGK  DL  P+ E G++
Sbjct: 1   MSDMVKITFPDGAVKEFAKGTTTEDIAASISPGLKKKSLAGKLNGKEIDLRTPINEDGTV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT      L ++RHS AH++A+A++ I+ +V+  +GP+IE+GFYYD + ++  + ++L
Sbjct: 61  EIITEGSEEGLQIMRHSAAHLLAQAIKRIYKDVKFGVGPVIENGFYYDVEMDEAITPEDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IEK+M++I+  + P +++ +S E+A+  F    +  K+E+L++IP  E V++Y QGE+
Sbjct: 121 PKIEKEMKKIVNANLPIVRKEVSREEAKARFAEIGDDLKLELLDAIPEGETVSIYEQGEF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRG HV STG++K+ FKL+ +AGAYWRGDS   ML R+YGTA+  + +L ++L  LE
Sbjct: 181 FDLCRGVHVPSTGKIKE-FKLLSLAGAYWRGDSKNQMLQRVYGTAFFKKADLEEHLRMLE 239

Query: 240 ESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTP 297
           E+++RDHRKL +E+ LF  ++  G G+  W  KG  I + +  Y+  ++I   YE + TP
Sbjct: 240 EAKERDHRKLGKELKLFANSQKVGQGLPLWLPKGATIRRVIERYIVDKEISLGYEHVYTP 299

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +  + L++ SGHWD Y+  MF     D+      T  L+PMNCP H+ ++   + SYRE
Sbjct: 300 VLGSKELYETSGHWDHYQEGMFPPMEMDN-----ETLVLRPMNCPHHMMIYKQDIHSYRE 354

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+ +E ++   LI  +Y+D
Sbjct: 355 LPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKDEFIRTVRLIQDVYED 414

Query: 418 FGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           FG      +LS R     EK    D +W+ A++++K  +D I +   +        GE A
Sbjct: 415 FGLSDYTFRLSYRDPEDTEKYFDDDEMWNKAQSMLKEAMDEIGHDYYE------AEGEAA 468

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  +K AIG++    T+Q+DF LP RF+  Y+    ++  PV+IHR V  ++ER
Sbjct: 469 FYGPKLDVQVKTAIGKEETLSTVQLDFLLPERFDLTYIGEDGKQHRPVVIHRGVVSTMER 528

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETIN 592
           F+  +IE  KG LP WL+P+Q  V  ++ +  ++YA+++   L+   L +E D R+E I 
Sbjct: 529 FVAFLIEEHKGALPTWLAPVQFQVIPVSPAVHLDYAKKVQERLQCEGLRVEVDSRDEKIG 588

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           YKIRE  ++KIP +++ GD+EA   ++ +R++G   ++ +SL
Sbjct: 589 YKIREAQMQKIPYMLVVGDQEAENGAVNVRKYGEQNSETISL 630


>gi|323490461|ref|ZP_08095668.1| threonyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
 gi|323395865|gb|EGA88704.1| threonyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
          Length = 642

 Score =  528 bits (1361), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 257/652 (39%), Positives = 418/652 (64%), Gaps = 20/652 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSI 59
           M   I+L FPDG++K F    T  ++A+SIS  L KKA+A  ++GK+ DL  P+ E G I
Sbjct: 1   MADMIQLKFPDGAVKEFEQGVTTEEIAQSISPGLRKKALAGKVDGKLVDLRTPLTEDGEI 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            I+TPE   +L ++RHS AH++A+A++ ++P+ ++ IGP+IE GFYYD D E   +S++L
Sbjct: 61  AIVTPESDEALEILRHSSAHLLAQAIKRMYPDAKLGIGPVIEHGFYYDIDTETAITSEDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEK+M++II  +   ++  ++  +A+E F + ++ YK+E+LE+IP  + V++Y QG++
Sbjct: 121 PLIEKEMKQIINENVEVIRHDVTRAEAQERFAAIEDPYKLELLEAIPDGDQVSIYEQGDF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRG HV STG++K+ FKL+ VAGAYWRG+S+  ML RIYGTA+  +++L  +L  LE
Sbjct: 181 FDLCRGVHVPSTGKLKE-FKLLSVAGAYWRGNSDNKMLQRIYGTAFFKKEDLKAHLEMLE 239

Query: 240 ESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTP 297
           E+++RDHRK+ +E++LF  ++  G G+  W  KG  I + +  Y+  ++ +  Y+ + TP
Sbjct: 240 EAKERDHRKIGKELNLFMNSQKVGQGLPMWLPKGATIRRIIERYIVDKEERLGYDHVYTP 299

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    L++ SGHWD Y+ +MF V   D+         L+PMNCP H+ +F  G+ SYR+
Sbjct: 300 VMGSVELYKTSGHWDHYQEDMFPVMKMDN-----EELVLRPMNCPHHMMIFKQGIHSYRQ 354

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           +PVR+AE G ++R E SG+L GL RVRG T +DAH+F   +Q+  E  ++ NLI+ +YKD
Sbjct: 355 MPVRIAELGLMHRYEMSGALSGLQRVRGMTLNDAHLFVRPDQIKEEFKRVVNLIVEVYKD 414

Query: 418 FGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           F       +LS R     EK    DA+W+ A+ ++K  +D +       ++   + GE A
Sbjct: 415 FNINDYSFRLSYRDPEDKEKYFDDDAMWNRAQAMLKEAMDELD------VDYIEVEGEAA 468

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  +K A+G++    T+Q+DF LP RF+  Y+    ++  PV+IHR V  ++ER
Sbjct: 469 FYGPKVDVQVKTALGKEETLSTVQLDFLLPERFDLSYIGEDGKQHRPVVIHRGVVSTMER 528

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETIN 592
           F+  +IE +KG  P WL+P+Q  +  ++  A   Y +E+   L+SH + ++ D R+E + 
Sbjct: 529 FVAFLIEEYKGAFPTWLAPVQVELIPVSLDAHSAYTKELQEKLQSHKIRVDIDERDEKLG 588

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           YKIRE  ++K+P +++ GDKE  + S+ +R++G   ++ +   D + ++  E
Sbjct: 589 YKIREAQMQKVPYMLVLGDKELEDGSVNVRKYGEQKSESMPFEDFVKLVQSE 640


>gi|56964462|ref|YP_176193.1| threonyl-tRNA synthetase [Bacillus clausii KSM-K16]
 gi|56910705|dbj|BAD65232.1| threonyl-tRNA synthetase [Bacillus clausii KSM-K16]
          Length = 643

 Score =  528 bits (1360), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 256/639 (40%), Positives = 413/639 (64%), Gaps = 22/639 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPE 65
            TFPDG++K+FP+  T   +A SIS  L KKA+A  +NG + DL  P+ E G+IEI+   
Sbjct: 7   FTFPDGTVKSFPIGTTTEAIAASISPGLKKKALAGKLNGTLYDLKTPLPEDGNIEIVVAG 66

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
               L ++RHS AH++A+AV+ ++P V++ +GP+IEDGFYYD D ++  ++++L +IEK+
Sbjct: 67  SDEGLDIMRHSTAHVLAQAVKRLFPGVKLGVGPVIEDGFYYDIDADESITAEDLPRIEKE 126

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M++II  +   L++ +S E+A   F+   + YK+E++E+IP +E VT+Y+QGE+FDLCRG
Sbjct: 127 MKKIIGENLEILREEVSREEAIARFKEINDPYKLELIEAIPEEETVTIYKQGEFFDLCRG 186

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
            HV ST ++K+ FKL+  AGAYWRGD+   ML RIYGTA+  + +L ++L  LEE+++RD
Sbjct: 187 VHVPSTNKIKE-FKLLSTAGAYWRGDAKNKMLQRIYGTAFFNKDDLNEHLRLLEEAKERD 245

Query: 246 HRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQH 303
           HRKL +E+ +F ++   G G+  W  KG  I + +  Y+  ++ +  Y+ + TP +    
Sbjct: 246 HRKLGKELGIFALSPKVGQGLPLWLPKGATIRRIIERYIVDKEERLGYQHVYTPILGSSE 305

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           L++ SGHWD Y+ +MF     D+      T  L+PMNCP H+ V+   ++SYR+LP+R+A
Sbjct: 306 LYKTSGHWDHYQDDMFPPMEMDN-----ETLVLRPMNCPHHMMVYKQDMRSYRQLPLRIA 360

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           E G ++R E SG++ GL RVRG T +DAH+FC  +Q+  E +++  LI  +YKDFG    
Sbjct: 361 ELGMMHRYEMSGAVSGLQRVRGMTLNDAHIFCRPDQIKEEFVRVVRLIQEVYKDFGLNDY 420

Query: 424 MVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
             +LS R     EK    D +W+ A+ ++K  +DT+     + I      GE AFYGPK 
Sbjct: 421 KFRLSYRDPEDKEKYFDDDDMWNKAQAMLKEAMDTLGLPYYEAI------GEAAFYGPKL 474

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +  +K A+G++    T+Q+DF LP RF+  YV    +   PV++HR V  ++ERF+  ++
Sbjct: 475 DVQVKTALGKEETLSTVQLDFLLPERFDLTYVGEDGKLHRPVVVHRGVVSTMERFVAFLL 534

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           E +KG LP WL+P+Q  V  +++   ++YA+ +   L+   + +E D R+E + YKIRE 
Sbjct: 535 EEYKGALPTWLAPVQVQVIPVSNEVHLDYAKRVIEQLQQAGVRVEIDDRDEKLGYKIREA 594

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFG--STTTQKVSLL 635
            I+KIP +++ GDKE +  ++ +R++G  ++++Q +S+ 
Sbjct: 595 QIQKIPYMLVLGDKEVAAEAVNVRKYGEQASSSQPLSVF 633


>gi|157150881|ref|YP_001450077.1| threonyl-tRNA synthetase [Streptococcus gordonii str. Challis
           substr. CH1]
 gi|189083628|sp|A8AWB7|SYT_STRGC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|157075675|gb|ABV10358.1| threonyl-tRNA synthetase [Streptococcus gordonii str. Challis
           substr. CH1]
          Length = 647

 Score =  528 bits (1360), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 266/640 (41%), Positives = 408/640 (63%), Gaps = 23/640 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  + E GSIEI+T
Sbjct: 2   IKITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGSIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQI 122
           P+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D      S+++L +I
Sbjct: 62  PDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNTAGQISNEDLPRI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWFD 181
           E++M++I+  + P +++ ++ ++ARE+F  K + YK+E++E     E  +T+YRQGE+ D
Sbjct: 122 EEEMKKIVKENFPSIREEVTKDEAREIF--KNDPYKLELIEEHSEDEGGLTIYRQGEYVD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++  F L+ VAGAYWRG+S+  M+ RIYGTAW  +++L  YL   EE+
Sbjct: 180 LCRGPHVPSTGRIQ-IFHLLHVAGAYWRGNSDNAMMQRIYGTAWFDKKDLKNYLQMREEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+++ G G+ FW   G  I + L  Y+  ++I   Y+ + TP +
Sbjct: 239 KERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVDKEIAAGYQHVYTPPL 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHWD YR +MF        + D   F L+PMNCP H+ VF H + SYRELP
Sbjct: 299 ASVELYKTSGHWDHYREDMFPTM----DMGDGEEFVLRPMNCPHHIQVFKHHVHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y+DF 
Sbjct: 355 IRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYEDFN 414

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
             +   +LS R      K   +D +W++A+ +++  LD +       ++     GE AFY
Sbjct: 415 LTEYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G++    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF 
Sbjct: 469 GPKLDIQVKTALGKEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMIHRGVISTMERFT 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IEN+KG  P WL+P Q  +  +++   V+YA E+A  L+   +  + D RNE + +K
Sbjct: 529 AILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAKKLRDRGVRADVDERNEKMQFK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           IR     KIP  +I GDKE  + ++ +RR+G   T  V++
Sbjct: 589 IRASQTSKIPYQLIVGDKEMEDGTVNVRRYGQKETHTVAV 628


>gi|148984063|ref|ZP_01817358.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
 gi|147923352|gb|EDK74465.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
 gi|301800452|emb|CBW33086.1| threonyl-tRNA synthetase [Streptococcus pneumoniae OXC141]
          Length = 647

 Score =  528 bits (1360), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 265/640 (41%), Positives = 406/640 (63%), Gaps = 23/640 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           I +TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  + E GSIEI+T
Sbjct: 2   INITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGSIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQI 122
           P+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D      S+++L +I
Sbjct: 62  PDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNTAGQISNEDLPRI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWFD 181
           E++MQ+I+  + P +++ ++ ++ARE+F  K + YK+E++E     E  +T+YRQGE+ D
Sbjct: 122 EEEMQKIVKENFPSIREEVTKDEAREIF--KNDPYKLELIEEHSEDEGGLTIYRQGEYVD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++  F L+ VAGAYWRG+S+  M+ RIYGTAW  +++L  YL   EE+
Sbjct: 180 LCRGPHVPSTGRIQ-IFHLLHVAGAYWRGNSDNAMMQRIYGTAWFDKKDLKNYLQMREEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+++ G G+ FW   G  I + L  Y+  +++   Y+ + TP +
Sbjct: 239 KERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVNKELASGYQHVYTPPL 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHWD Y+ +MF        + D   F L+PMNCP H+ VF H + SYRELP
Sbjct: 299 ASVELYKTSGHWDHYQEDMFPTM----DMGDGEEFVLRPMNCPHHIQVFKHHVHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y+DF 
Sbjct: 355 IRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYEDFN 414

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
             +   +LS R      K   +D +W++A+ +++  LD +       ++     GE AFY
Sbjct: 415 LTEYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G++    TIQ+DF LP RF+  Y+ +  E   PVMIHR V  ++ERF 
Sbjct: 469 GPKLDIQIKTALGKEETLSTIQLDFLLPERFDLKYIGADGEDHRPVMIHRGVISTMERFT 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IEN+KG  P WL+P Q  +  +++   V+YA E+   L+   +  + D RNE + +K
Sbjct: 529 AILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVVKKLRDRGVRADVDERNEKMQFK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           IR     KIP  +I GDKE  + ++ +RR+G   TQ VS+
Sbjct: 589 IRASQTSKIPYQLIVGDKEMEDETVNVRRYGQKETQTVSV 628


>gi|225447618|ref|XP_002270988.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 670

 Score =  528 bits (1360), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 269/574 (46%), Positives = 381/574 (66%), Gaps = 21/574 (3%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           I + T E    L  IRH+CAH+MA AVQ ++P+ +V IGP IE+GFYYDFD E P +  +
Sbjct: 88  IVLPTNESSERLLRIRHTCAHVMAMAVQKLFPDAKVTIGPWIENGFYYDFDME-PLTDKD 146

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR-QG 177
           L +I+K+M  II R+ P +++ +S ++A+    +  E YK+EIL+SI  ++ +T+Y   G
Sbjct: 147 LKRIKKEMDRIIGRNLPLIREEVSRDEAQRRIMAVNEPYKMEILDSI-QEDPITIYHIGG 205

Query: 178 EWFDLCRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           EW+DLC GPHV  TG + +K  +L  VAGAYWRGD  + ML RIYGTAW  +++L  YL+
Sbjct: 206 EWWDLCAGPHVEYTGNINRKAVELESVAGAYWRGDEKKQMLQRIYGTAWENEEQLKAYLH 265

Query: 237 FLEESEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLI--SYMRRKIKDDYEE 293
           F EE+++RDHR+L +++DLF I  E G G++FWH KG  I + +I  S+ +  I+  Y+ 
Sbjct: 266 FKEEAKRRDHRRLGQDLDLFSIQDEAGGGLVFWHPKG-AIVRHIIEDSWKKIHIEHGYDL 324

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           + TP V    LW+ SGH D YR NM++    +D +     + L+PMNCP H+ ++   L 
Sbjct: 325 LYTPHVARADLWKTSGHLDFYRENMYSQITIEDEL-----YQLRPMNCPYHILIYKRKLH 379

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYR+ P+R+AE G+VYR E SGSLHGL RVRGFTQDDAH+FC ++Q+ +E   + +L   
Sbjct: 380 SYRDFPIRVAELGTVYRYELSGSLHGLFRVRGFTQDDAHIFCLEDQIKDEIRGVLDLTEE 439

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           I   FGF K  V LSTRPEK VG+D +W+ A + ++  LD    S   RI+ G     GA
Sbjct: 440 ILLQFGFSKYEVNLSTRPEKAVGADDIWEKATSALRDALDDKGWSY--RIDEG----GGA 493

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  ++DA+GR WQC TIQVDFNLP RF+  YV+S+SEK  P+MIHRAV GS+ER
Sbjct: 494 FYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDITYVDSNSEKQRPIMIHRAVLGSLER 553

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           F G++IE++ G+ PLWLSPIQA V  +T + +EY  E+ N LK++ +  E     E +  
Sbjct: 554 FFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVTNKLKANGIRAEV-CHGERLPK 612

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIR-RFGS 626
            IR    ++IP++ + G KE   +++ +R RFG 
Sbjct: 613 LIRNSEKQRIPLMAVVGPKEVETQTVTVRSRFGG 646


>gi|293364941|ref|ZP_06611658.1| threonine--tRNA ligase [Streptococcus oralis ATCC 35037]
 gi|307703194|ref|ZP_07640140.1| threonyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
 gi|291316391|gb|EFE56827.1| threonine--tRNA ligase [Streptococcus oralis ATCC 35037]
 gi|307623269|gb|EFO02260.1| threonyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
          Length = 647

 Score =  528 bits (1360), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 265/644 (41%), Positives = 410/644 (63%), Gaps = 23/644 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  + E G+IEI+T
Sbjct: 2   IKITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGAIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQI 122
           P+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D      S+++L +I
Sbjct: 62  PDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNTAGQISNEDLPRI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWFD 181
           E++MQ+I+  + P +++ ++ ++ARE+F  K + YK+E++E     E  +T+Y QGE+ D
Sbjct: 122 EEEMQKIVKENFPSIREEVTKDEAREIF--KNDPYKLELIEEHSEDEGGLTIYHQGEYVD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ STG+++  F L+ VAGAYWRG+S+  M+ RIYGTAW  +++L  YL   EE+
Sbjct: 180 LCRGPHIPSTGRIQ-IFHLLHVAGAYWRGNSDNAMMQRIYGTAWFDKKDLKNYLQMREEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+++ G G+ FW   G  I + L  Y+  +++   Y+ + TP +
Sbjct: 239 KERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVDKELASGYQHVYTPPL 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHWD Y+ +MF        + D   F L+PMNCP H+ VF H + SYRELP
Sbjct: 299 ASVELYKTSGHWDHYQEDMFPTM----DMGDGEEFVLRPMNCPHHIQVFKHHVHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y+DF 
Sbjct: 355 IRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYEDFN 414

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
             +   +LS R      K   +D +W++A+ +++  LD +       ++     GE AFY
Sbjct: 415 LTEYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G++    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF 
Sbjct: 469 GPKLDIQVKTALGKEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMIHRGVISTMERFT 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IEN+KG  P WL+P Q  +  +++   V+YA E+A  L+   +  + D RNE + +K
Sbjct: 529 AILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAKKLRDRGVRADVDERNEKMQFK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           IR     KIP  +I GDKE  + ++ +RR+G   TQ VS+ D +
Sbjct: 589 IRASQTSKIPYQLIVGDKEMEDGTVNVRRYGQKETQTVSVDDFV 632


>gi|307707001|ref|ZP_07643798.1| threonyl-tRNA synthetase [Streptococcus mitis SK321]
 gi|307617527|gb|EFN96697.1| threonyl-tRNA synthetase [Streptococcus mitis SK321]
          Length = 647

 Score =  528 bits (1360), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 266/644 (41%), Positives = 409/644 (63%), Gaps = 23/644 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           I +TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  + E GSIEI+T
Sbjct: 2   INITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGSIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQI 122
           P+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D      S+++L +I
Sbjct: 62  PDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNTAGQISNEDLPRI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWFD 181
           E++MQ+I+  + P +++ ++ ++ARE+F  K + YK+E++E     E  +T+YRQGE+ D
Sbjct: 122 EEEMQKIVKENFPSIREEVTKDEAREIF--KNDPYKLELIEEHSEDEGGLTIYRQGEYVD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++  F L+ VAGAYWRG+S+  M+ RIYGTAW  +++L  YL   EE+
Sbjct: 180 LCRGPHVPSTGRIQ-IFHLLHVAGAYWRGNSDNAMMQRIYGTAWFDKKDLKNYLQMREEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+++ G G+ FW   G  I + L  Y+  +++   Y+ + TP +
Sbjct: 239 KERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVDKELASGYQHVYTPPL 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHWD Y+ +MF        + D   F L+PMNCP H+ VF H + SYRELP
Sbjct: 299 ASVELYKTSGHWDHYQEDMFPTM----DMGDGEEFVLRPMNCPHHIQVFKHHVHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y+DF 
Sbjct: 355 IRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYEDFN 414

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
             +   +LS R      K   +D +W++A+ +++  LD +       ++     GE AFY
Sbjct: 415 LTEYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G++    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF 
Sbjct: 469 GPKLDIQVKTALGKEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMIHRGVISTMERFT 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IEN+KG  P WL+P Q  +  +++   V+YA E+A  L+   +  + D RNE + +K
Sbjct: 529 AILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAKKLRDRGVRADVDERNEKMQFK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           IR     KIP  +I GDKE  + ++ +RR+    TQ VS+ D +
Sbjct: 589 IRASQTSKIPYQLIVGDKEMEDGTVNVRRYAQKETQTVSVDDFV 632


>gi|221232374|ref|YP_002511527.1| threonyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669]
 gi|254783539|sp|B8ZM32|SYT_STRPJ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|220674835|emb|CAR69409.1| threonyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669]
          Length = 647

 Score =  528 bits (1360), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 265/640 (41%), Positives = 405/640 (63%), Gaps = 23/640 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           I +TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  + E GSIEI+T
Sbjct: 2   INITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGSIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQI 122
           P+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D      S+++L +I
Sbjct: 62  PDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNTAGQISNEDLPRI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWFD 181
           E++MQ+I+  + P +++ ++ ++ARE+F  K + YK+E++E     E  +T+YRQGE+ D
Sbjct: 122 EEEMQKIVKENFPSIREEVTKDEAREIF--KNDPYKLELIEEHSEDEGGLTIYRQGEYVD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++  F L+ VAGAYWRG+S+  M+ RIYGTAW  +++L  YL   EE+
Sbjct: 180 LCRGPHVPSTGRIQ-IFHLLHVAGAYWRGNSDNAMMQRIYGTAWFEKKDLKNYLQMREEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+++ G G+ FW   G  I + L  Y+  +++   Y+ + TP +
Sbjct: 239 KERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVNKELASGYQHVYTPPL 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHWD Y+ +MF        + D   F L+PMNCP H+ VF H + SYRELP
Sbjct: 299 ASVELYKTSGHWDHYQEDMFPTM----DMGDGEEFVLRPMNCPHHIQVFKHHVHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y+DF 
Sbjct: 355 IRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYEDFN 414

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R      K   +D +W++A+ +++  LD +       ++     GE AFY
Sbjct: 415 LTDYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G++    TIQ+DF LP RF+  Y+ +  E   PVMIHR    ++ERF 
Sbjct: 469 GPKLDIQIKTALGKEETLSTIQLDFLLPERFDLKYIGADGEDHRPVMIHRGAISTMERFT 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IEN+KG  P WL+P Q  +  +++   V+YA E+A  L+   +  + D RNE + +K
Sbjct: 529 AILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAKKLRDRGVRADVDERNEKMQFK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           IR     KIP  +I GDKE  + ++ +RR+G   TQ VS+
Sbjct: 589 IRASQTSKIPYQLIVGDKEMEDETVNVRRYGQKETQTVSV 628


>gi|290580052|ref|YP_003484444.1| putative threonyl-tRNA synthetase [Streptococcus mutans NN2025]
 gi|254996951|dbj|BAH87552.1| putative threonyl-tRNA synthetase [Streptococcus mutans NN2025]
          Length = 649

 Score =  528 bits (1360), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 264/640 (41%), Positives = 405/640 (63%), Gaps = 23/640 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           IK+TFPDG+++ F    T  ++AESIS+SLAKKA+A   NG++ D    + ++GSIEI+T
Sbjct: 2   IKITFPDGAVREFEAGVTTFEIAESISKSLAKKALAGKFNGQLIDTIRAITQDGSIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQI 122
           P+   +L ++RHS AH+ A+A + ++P++ + +GP I+DGFYYD D E    S+++L +I
Sbjct: 62  PDHEDALDILRHSAAHLFAQAARRLFPDIHLGVGPAIQDGFYYDTDNEAGQISNEDLPRI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWFD 181
           E++M++I+  + P +++ ++ ++ARE+F  K + YK+E++E        +T+YRQGE+ D
Sbjct: 122 EEEMKKIVKENFPSVREEVTKDEAREIF--KNDPYKLELIEEHSEDAGGLTIYRQGEYVD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++  F L+ VAGAYWRGDSN  M+ RIYGTAW  +++L +YL   EE+
Sbjct: 180 LCRGPHVPSTGRIQ-VFHLLNVAGAYWRGDSNNAMMQRIYGTAWFDKKDLKKYLQMREEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+++ G G+ FW   G  I + +  Y+  K +   Y+ + TP +
Sbjct: 239 KERDHRKLGKELDLFMISQEVGQGLPFWLPDGATIRRIIERYITDKEVASGYQHVYTPPI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHWD YR +MF        + D  +F L+PMNCP H+ V+ + + SYRELP
Sbjct: 299 ASVDLYKTSGHWDHYREDMFPTM----DMGDGESFVLRPMNCPHHIEVYKNHVHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  +   LII +Y+DF 
Sbjct: 355 IRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQVEDEFKRTLQLIIDVYEDFN 414

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R      K    D +W+ ++ ++K  +D +       ++     GE AFY
Sbjct: 415 LTDYSFRLSYRDPNDTHKYFDDDEMWEKSQTMLKAAMDDMG------LDYYEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G D    TIQ+DF LP RF   Y+ +  E+  PVMIHR +  ++ERF 
Sbjct: 469 GPKLDIQVKTALGNDETLSTIQLDFLLPERFELTYIGADGEEHRPVMIHRGIVSTMERFT 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
             +IE +KG  P WL+P Q  V  I++ A ++YA E+A  L+ H +  + D RNE + YK
Sbjct: 529 AYLIETYKGAFPTWLAPHQVTVIPISNEAHIDYAWEVAKELRDHGIRADVDDRNEKMQYK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           IR+   KK+P  +I GDKE    ++ +RR+GS  T   S+
Sbjct: 589 IRQSQTKKVPYQLIVGDKEVESGTVNVRRYGSKQTHTESI 628


>gi|322374759|ref|ZP_08049273.1| threonine--tRNA ligase [Streptococcus sp. C300]
 gi|321280259|gb|EFX57298.1| threonine--tRNA ligase [Streptococcus sp. C300]
          Length = 647

 Score =  528 bits (1360), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 265/640 (41%), Positives = 409/640 (63%), Gaps = 23/640 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  + E GSIEI+T
Sbjct: 2   IKITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGSIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQI 122
           P+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D +    S+++L +I
Sbjct: 62  PDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNQAGQISNEDLPRI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWFD 181
           E++M++I+  + P +++ ++ ++ARE+F  K + YK+E++E     E  +T+YRQGE+ D
Sbjct: 122 EEEMKKIVKENFPSIREEVTKDEAREIF--KNDPYKLELIEEHSEDEGGLTIYRQGEYVD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++  F L+ VAGAYWRG+S+  M+ RIYGTAW  +++L  YL   EE+
Sbjct: 180 LCRGPHVPSTGRIQ-IFHLLHVAGAYWRGNSDNAMMQRIYGTAWFDKKDLKNYLQMREEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+++ G G+ FW   G  I + L  Y+  +++   Y+ + TP +
Sbjct: 239 KERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVDKELASGYQHVYTPPL 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHWD Y+ +MF        + D   F L+PMNCP H+ VF H + SYRELP
Sbjct: 299 ASVELYKTSGHWDHYQEDMFPTM----DMGDGEEFVLRPMNCPHHIQVFKHHVHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y+DF 
Sbjct: 355 IRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYEDFN 414

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
             +   +LS R      K   +D +W++A+ +++  LD +       ++     GE AFY
Sbjct: 415 LTEYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G++    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF 
Sbjct: 469 GPKLDIQVKTALGKEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMIHRGVISTMERFT 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IEN+KG  P WL+P Q  +  +++   V+YA E+A  L+   +  + D RNE + +K
Sbjct: 529 AILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAKKLRDRGVRADVDERNEKMQFK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           IR     KIP  +I GDKE  + ++ +RR+G   TQ V +
Sbjct: 589 IRASQTSKIPYQLIVGDKEMEDGTVNVRRYGQKETQTVPV 628


>gi|169334538|ref|ZP_02861731.1| hypothetical protein ANASTE_00941 [Anaerofustis stercorihominis DSM
           17244]
 gi|169259255|gb|EDS73221.1| hypothetical protein ANASTE_00941 [Anaerofustis stercorihominis DSM
           17244]
          Length = 637

 Score =  528 bits (1360), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 267/621 (42%), Positives = 396/621 (63%), Gaps = 17/621 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           IK+TFPDG+IK F    +  D+AESIS +L +  +   +N ++ D+   + ++ SI    
Sbjct: 2   IKVTFPDGNIKEFENGVSVLDIAESISPALKRDVLCAKVNDEIVDIRTTLDKDASIVFYK 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
            +D        H+ +HI+A+AV+ ++ + V++AIGP I++GFYYDFD E P + ++L +I
Sbjct: 62  FDDLEGKKAFWHTTSHILAQAVKRLYGDKVKLAIGPSIDNGFYYDFDIETPITENDLEKI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M++I+  +    K  L  ++A    +   E YKVE++E +P    ++ Y+QGE+ DL
Sbjct: 122 EAEMKKIVKENLSIEKFVLPRKEAIGFEKEANEDYKVELIEDLPEDSIISFYKQGEFTDL 181

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPH+ +T  VK   KL+   GAYWRGDSN+ ML R+YG ++   + L +YL  LEE++
Sbjct: 182 CAGPHLLNTKPVKAI-KLLSTTGAYWRGDSNKKMLQRVYGISFPKAKLLEEYLAMLEEAK 240

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLD 301
           KRDHRK+ ++MDLF I E+G G  F+  KG  I   L ++ R +  K  Y+EI TP +L+
Sbjct: 241 KRDHRKIGKDMDLFMICEEGPGFPFFLPKGMVIRNELENFWREEHRKRGYQEIKTPLILN 300

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW  SGHWD Y+ NM+  +  D+       +A+KPMNCPG + V+   + SYR+LP+R
Sbjct: 301 EQLWHTSGHWDHYKDNMYFTRIDDND------YAIKPMNCPGSMLVYKRKMWSYRDLPLR 354

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           + E G V+R+E SG+LHGLMRVR FTQDDAH+F   EQ+  E + + + I  +Y  FGF 
Sbjct: 355 IGEMGQVHRHELSGALHGLMRVRTFTQDDAHIFMLPEQIKEEVIGVIDFIDYVYNMFGF- 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
           K  V+LSTRP+  +GSD  W+ A   ++   + ++    D +   V  G+GAFYGPK ++
Sbjct: 414 KYHVELSTRPDDSMGSDEDWNMATEALR---EAMEEKGMDYV---VNEGDGAFYGPKLDF 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L+D +GR WQCGTIQ+DF +P RF+  Y+    EK  PVMIHR +FGSIERFIGI+ E+
Sbjct: 468 HLEDCLGRTWQCGTIQLDFQMPQRFDLTYIGHDGEKHRPVMIHRVIFGSIERFIGILTEH 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           F G  PLWL+P+QA +  IT   +EY + I + L+   +  E D R+E + YKIRE  ++
Sbjct: 528 FAGAFPLWLAPVQAKLIPITDRNLEYVKGIKDKLEQKGIRCEIDDRSEKMGYKIREAQLE 587

Query: 602 KIPIIIICGDKEASERSIGIR 622
           K+P +II GD++     I +R
Sbjct: 588 KVPYMIIAGDRDMENGVISVR 608


>gi|15606769|ref|NP_214149.1| threonyl-tRNA synthetase [Aquifex aeolicus VF5]
 gi|8928367|sp|O67583|SYT_AQUAE RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|2984004|gb|AAC07549.1| threonyl-tRNA synthetase [Aquifex aeolicus VF5]
          Length = 638

 Score =  528 bits (1359), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 261/606 (43%), Positives = 394/606 (65%), Gaps = 18/606 (2%)

Query: 23  GSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPEDPRSLAVIRHSCAHIM 81
           G+ + +    +  K A+   INGK+ DL  PVRE G I+ +      SL ++RHS AHIM
Sbjct: 18  GTPLGKIFELAGIKDALGGVINGKIIDLQTPVRESGEIKPVYRGSKESLEIMRHSLAHIM 77

Query: 82  AEAVQSIW--PEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQIEKKMQEIIARDSPFLK 138
           A+A++ ++   +V + +GP  E+GFYYD + E    + ++L +IE+KM+EII RD P L+
Sbjct: 78  AQALKELYGAKKVHLGVGPTTEEGFYYDVEVEGHKITEEDLPKIEQKMKEIIERDYPILR 137

Query: 139 QYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFF 198
           + LS E+A +LF+  KE YK++I++ IP +E +++Y QG++ DLC+GPH+ STG+   F 
Sbjct: 138 RELSREEAIKLFDKLKEKYKIDIIKEIPEEEVISVYEQGDFIDLCKGPHLPSTGKAGAF- 196

Query: 199 KLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI 258
           KL  ++GAYW+G S++P L+RIYG A+ + +E+ + L F EE +KRDHR+L +E++ F I
Sbjct: 197 KLTSISGAYWKGRSDQPQLTRIYGIAYWSDKEVKERLKFYEEVKKRDHRRLGKELEFFTI 256

Query: 259 AED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
            ++ G+G+I W  +G    + L  Y+R + +K  Y+ + TP V    LW+ SGH + Y+ 
Sbjct: 257 DDNVGAGLILWLPRGAIYRKVLEDYLREEHLKRGYQLVYTPHVGKSKLWETSGHLECYKQ 316

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
           NMF     D+       + +KPMNCP H+A++    +SY+ELP++L E G+VYR E SG 
Sbjct: 317 NMFPSMKIDE-----EEYYVKPMNCPFHIAIYKSRTRSYKELPLKLFELGTVYRYELSGV 371

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
           LHGL+RVRGFTQDDAH+ CT EQ+ +   +  +  +S  KDFGF +  + LSTRPE  +G
Sbjct: 372 LHGLLRVRGFTQDDAHIVCTPEQVNDVIRETLDFALSTLKDFGFNEFKIYLSTRPEYSIG 431

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
           SD  W+ ++N +K  ++ +    +      +  G GAFYGPK +  ++DAIGR WQ  TI
Sbjct: 432 SDEQWEVSQNALKKAIEDLGYEYE------IDEGGGAFYGPKIDVKIRDAIGRMWQLSTI 485

Query: 497 QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI 556
           Q DFNLP RF+  YV   ++K  P MIHRA+ GSIERF GI++E++ G LP+WLSP Q +
Sbjct: 486 QFDFNLPERFDMTYVGPDNKKHRPYMIHRALLGSIERFTGILLEHYAGLLPIWLSPTQVM 545

Query: 557 VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASE 616
           +  I     EYA+++   LK + +  E D R E +N KIR+  +KKIP+I++ GD+EA  
Sbjct: 546 IIPIADRHHEYAKKVYEFLKENGIRAEMDLREERMNAKIRDAELKKIPVILVVGDREAQN 605

Query: 617 RSIGIR 622
            ++ +R
Sbjct: 606 NTVSVR 611


>gi|315648987|ref|ZP_07902081.1| threonyl-tRNA synthetase [Paenibacillus vortex V453]
 gi|315275668|gb|EFU39022.1| threonyl-tRNA synthetase [Paenibacillus vortex V453]
          Length = 645

 Score =  528 bits (1359), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 263/651 (40%), Positives = 412/651 (63%), Gaps = 25/651 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           I +  PDGS++ +   ++  DVA SIS  L K AVA  ++G V DLS P+++G+ IEI+T
Sbjct: 3   INIKLPDGSVREYEAGSSIEDVAASISSGLRKNAVAGKLDGIVVDLSTPLQDGALIEIVT 62

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIW--PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
            + P  L V+RHS AH++A+A + ++   EV++ +GP+IEDGFYYD D E+P + ++L +
Sbjct: 63  QDTPEGLEVMRHSTAHLLAQATKRLYGAKEVKLGVGPVIEDGFYYDMDLEEPLNPEDLQK 122

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK+M+ II  + P +++ +S  +A  +F    + YK+E++ ++P    +T+Y QGE+FD
Sbjct: 123 IEKEMERIIGENLPIVRKEVSRAEALRVFGELGDPYKLELINALPEDSVITIYEQGEFFD 182

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG++K  FKLM VAGAYWRGDS   ML R+YGTA+  + +L ++L+ LEE+
Sbjct: 183 LCRGPHVPSTGKIK-VFKLMNVAGAYWRGDSKNKMLQRVYGTAFVKKAQLDEHLHLLEEA 241

Query: 242 EKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISY---MRRKIKDDYEEINTP 297
           +KRDHRKL +E+ +F  ++  G G+  W   G K+ +TL  Y   M  ++   Y+ + TP
Sbjct: 242 KKRDHRKLGKELQMFTFSQLVGQGLPIWLPNGAKLRRTLERYIVDMEERL--GYQHVYTP 299

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  L++ SGHW+ Y+ +MF     D+         L+PMNCP H+ V+   + SYR+
Sbjct: 300 VLGNVELYKTSGHWEHYQEDMFPKMEMDN-----EELVLRPMNCPHHMMVYKSDMHSYRD 354

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AE G  +R E SG+L GL RVR  T +D+H+FC  +Q+  E  ++  LI+++YKD
Sbjct: 355 LPIRIAELGMQHRYEMSGALTGLHRVRAMTLNDSHIFCRPDQIKEEFARVIQLIMTVYKD 414

Query: 418 FGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           FG      +LS R     EK   +D +W+ ++ +++ V++++     +        GE A
Sbjct: 415 FGIHDYRFRLSYRDPQDTEKYFQNDEMWEMSQRMLREVVESLDMPFYEA------EGEAA 468

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  ++ A+G++    T+Q+DF LP RF   YV    +K  PV+IHR + G++ER
Sbjct: 469 FYGPKLDVQIRTALGKEETLSTVQLDFLLPERFELEYVGDDGQKHRPVVIHRGILGTMER 528

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           F   ++ENF G LPLWLSP+Q  V  ++++  +YA+E+A  L+   +S+E D RNE + Y
Sbjct: 529 FTAFLLENFAGALPLWLSPVQVKVIPVSNAFEDYAKEVAEKLQFAGISVEPDLRNEKLGY 588

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIRE  ++KIP + I G+ E +  ++ +R+ G       SL D I  L +E
Sbjct: 589 KIREAQLEKIPYMFIVGENEKNAGAVSVRKRGEGDIGAQSLDDIILKLREE 639


>gi|88195489|ref|YP_500293.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|123003455|sp|Q2FXP7|SYT_STAA8 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|87203047|gb|ABD30857.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|329728437|gb|EGG64874.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus 21189]
          Length = 645

 Score =  528 bits (1359), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 267/636 (41%), Positives = 402/636 (63%), Gaps = 21/636 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           I + FPDG+ K F    T  D+A+SIS  L KKAVA   NG++ DL+ P+  +GSIEI+T
Sbjct: 4   INIQFPDGNKKAFDKGTTTEDIAQSISPGLRKKAVAGKFNGQLVDLTKPLETDGSIEIVT 63

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P    +L V+RHS AH+MA A++ ++  V+  +GP+IE GFYYDFD +Q  SSD+  QIE
Sbjct: 64  PGSEEALEVLRHSTAHLMAHAIKRLYGNVKFGVGPVIEGGFYYDFDIDQNISSDDFEQIE 123

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K M++I+  +    ++ +S ++ +ELF +  + YK+E++++IP  ENVTLY QG++ DLC
Sbjct: 124 KTMKQIVNENMKIERKVVSRDEVKELFSN--DEYKLELIDAIPEDENVTLYSQGDFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RG HV ST ++K+F KL+  AGAYWRGDSN  ML RIYGTA+  ++EL  +L  LEE ++
Sbjct: 182 RGVHVPSTAKIKEF-KLLSTAGAYWRGDSNNKMLQRIYGTAFFDKKELKAHLQMLEERKE 240

Query: 244 RDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLD 301
           RDHRK+ +E++LF  ++  G+G+  W   G  I + +  Y+  +++   Y+ + TP + +
Sbjct: 241 RDHRKIGKELELFTNSQLVGAGLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLAN 300

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             L++ SGHWD Y+ +MF     D+T     +  L+PMNCP H+ ++ +   SYRELP+R
Sbjct: 301 VDLYKTSGHWDHYQEDMFPPMQLDET----ESMVLRPMNCPHHMMIYANKPHSYRELPIR 356

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AE G+++R E SG++ GL RVRG T +D+H+F   +Q+  E  ++ N+II +YKDFGFE
Sbjct: 357 IAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVNMIIDVYKDFGFE 416

Query: 422 KIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
               +LS R     EK    D +W+ AEN++K   D +  S ++ I      GE AFYGP
Sbjct: 417 DYSFRLSYRDPEDKEKYFDDDDMWNKAENMLKEAADELGLSYEEAI------GEAAFYGP 470

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  +K A+G++    T Q+DF LP RF+  Y+    E   PV+IHR V  ++ERF+  
Sbjct: 471 KLDVQVKTAMGKEETLSTAQLDFLLPERFDLTYIGQDGEHHRPVVIHRGVVSTMERFVAF 530

Query: 538 MIENFKGNLPLWLSPIQA-IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           + E  KG  P WL+P Q  I+        +YA+++ + LKS  + +  D RNE + YKIR
Sbjct: 531 LTEETKGAFPTWLAPKQVQIIPVNVDLHYDYARQLQDELKSQGVRVSIDDRNEKMGYKIR 590

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
           E  ++KIP  I+ GDKE     + +R++GS   + V
Sbjct: 591 EAQMQKIPYQIVVGDKEVENNQVNVRQYGSQDQETV 626


>gi|262043503|ref|ZP_06016623.1| threonine-tRNA ligase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259039149|gb|EEW40300.1| threonine-tRNA ligase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 530

 Score =  528 bits (1359), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 260/529 (49%), Positives = 354/529 (66%), Gaps = 14/529 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           +  T PDGS+K+    AT  +VAESI  S+AK AV   I+GK  DL +  +  G + IIT
Sbjct: 14  LTFTLPDGSLKHVRKGATLQNVAESIGSSVAKSAVYAEIDGKCVDLLEKAKNSGKLNIIT 73

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
             D  +L  IR  C  ++A +V+ ++P  ++  G + ++GFYYDF  ++PF+ D+L  IE
Sbjct: 74  VFDEEALGPIRRGCLLLLAASVKQLFPSARMVEGQLTKEGFYYDFAVDKPFTRDDLGMIE 133

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           + M  +IA + P +K+ ++  +A + FE + E +K   L  I A ++VTL    ++ D  
Sbjct: 134 QHMTSLIAENPPIIKEQVTRAQAIDCFEQRGEKFKSTELMEILADKSVTLCHLRQFTDGF 193

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GP V     +K   KL+ V+GAYWRG++N   L RIYGTAW ++++L  +L    E+EK
Sbjct: 194 NGPLVPDLRFLKNM-KLLNVSGAYWRGEANNVQLQRIYGTAWASKKQLDGWLEKTAEAEK 252

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQ 302
           RDHRKL RE+DLFH  ++  G +FWH +GW IFQ+LI+YMR R     Y E+NTP V+D+
Sbjct: 253 RDHRKLGRELDLFHFQDNAPGAVFWHPRGWTIFQSLIAYMRSRHEVAGYVEVNTPDVMDR 312

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHWD+YR +MF  +  D      R FALKPMNCPG V++F +G+KSYR+LPVRL
Sbjct: 313 SLWEISGHWDNYRDHMFTTQTEDG-----RNFALKPMNCPGAVSLFKYGIKSYRDLPVRL 367

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           +EFG V+R EPSGSLHGL+RVR FTQDDAH+FCT +Q+  EC  I  L++ IYK FGFE+
Sbjct: 368 SEFGKVHRYEPSGSLHGLLRVRHFTQDDAHIFCTLQQVEGECKSILQLVLDIYKQFGFEE 427

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + +KLSTRPEKR+GSDA WD  EN +   L+      Q  +N     GEGAFYGPK E++
Sbjct: 428 VAIKLSTRPEKRMGSDADWDRLENALSASLEA--QGLQWSVNP----GEGAFYGPKLEFV 481

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
           L+DAIGRDWQCGT+QVD NLP RF+  Y+        PVM+HRA+FGS+
Sbjct: 482 LRDAIGRDWQCGTLQVDMNLPERFDIGYIAEDGSTKRPVMLHRALFGSL 530


>gi|306831875|ref|ZP_07465030.1| threonine--tRNA ligase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|304425801|gb|EFM28918.1| threonine--tRNA ligase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
          Length = 648

 Score =  528 bits (1359), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 268/636 (42%), Positives = 410/636 (64%), Gaps = 23/636 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           +K+TFPDG+++ F    T  ++A+SIS SLAKKA+A   NG++ D +  + E GSIEI+T
Sbjct: 2   VKITFPDGAVREFESGVTPFEIAQSISNSLAKKALAGKFNGQLIDTTREITEDGSIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQI 122
           P+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D K    S ++L +I
Sbjct: 62  PDHEDALGILRHSAAHLFAQAAKRLFPDLCLGVGPAIEDGFYYDTDNKAGQISDEDLPRI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWFD 181
           E++M++I+  + P +++ ++ ++ARELF  K + YK+E++E   A E  +T+Y QGE+ D
Sbjct: 122 EEEMKKIVKENFPCIRKEITIDEARELF--KNDPYKLELIEEHGADEGGLTVYSQGEFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++  F L+ VAGAYWRG+S+  M+ R+YGTAW  +++L  YL   +E+
Sbjct: 180 LCRGPHVPSTGRIQ-VFHLLNVAGAYWRGNSDNAMMQRVYGTAWFDKKDLKAYLKQRQEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+++ G G+ FW   G  I +TL  Y+  +++   Y  + TP +
Sbjct: 239 KERDHRKLGKELDLFMISQEVGQGLPFWLPDGATIRRTLERYIVDKEVASGYLHVYTPPL 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHWD YR +MF        + D   F L+PMNCP H+ V+ H + SYRELP
Sbjct: 299 ASVDLYKTSGHWDHYREDMFPTM----DMGDGEEFVLRPMNCPHHIQVYKHHVHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  K   LII +Y+DF 
Sbjct: 355 IRIAEIGMMHRYEKSGALSGLQRVREMSLNDGHLFVTPEQIQEEFQKALQLIIDVYEDFN 414

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
             +   +LS R      K    D +W++A++++K  LD +       ++     GE AFY
Sbjct: 415 LTEYRFRLSLRDPKDTHKYYDDDEMWENAQSMLKAALDEMG------VDYFEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G +    TIQ+DF LP RF   Y+ +  E+  PVMIHR V  ++ERF 
Sbjct: 469 GPKLDIQVKTALGNEETLSTIQLDFLLPERFGLTYIGADGEEHRPVMIHRGVISTMERFT 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IEN+KG  P WL+P Q  V  +++ A V+YA E+A +L+   + ++ D RNE +  K
Sbjct: 529 AILIENYKGAFPTWLAPHQVTVIPVSNEAHVDYAWEVAKVLRDKGVRVDVDERNEKMQLK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
           IR+   KKIP  +I GDKE +++++ +RR+GS  T 
Sbjct: 589 IRQSQTKKIPYQLIVGDKEMADKTVNVRRYGSKQTH 624


>gi|312864463|ref|ZP_07724694.1| threonine--tRNA ligase [Streptococcus downei F0415]
 gi|311099590|gb|EFQ57803.1| threonine--tRNA ligase [Streptococcus downei F0415]
          Length = 651

 Score =  527 bits (1358), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 261/640 (40%), Positives = 409/640 (63%), Gaps = 23/640 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K+TFPDG+++ F    T  ++A++IS SLAKKA+A  +N ++ D + P+ ++GS+EI+T
Sbjct: 2   VKITFPDGAVREFESGITTFEIAQTISNSLAKKALAGKLNDRLIDTTRPITQDGSLEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
           P+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D      S+++L +I
Sbjct: 62  PDHEDALGILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNGAGQISNEDLPKI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWFD 181
           E++M++I+  + P +++ ++ ++ARE+F  K + YK+E++E        +T+YRQGE+ D
Sbjct: 122 EEEMKKIVKENFPSIREEVTKDQAREIF--KNDPYKLELIEEHSEDAGGLTIYRQGEYVD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++  F L+ VAGAYWRG+S+  M+ RIYGTAW  +++L  YL  LEE+
Sbjct: 180 LCRGPHVPSTGRIQ-VFHLLNVAGAYWRGNSDNAMMQRIYGTAWFDKKDLKAYLKRLEEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+++ G G+ FW   G  I +T+  Y+  R++   Y+ + TP +
Sbjct: 239 KERDHRKLGKELDLFMISQEVGQGLPFWLPDGATIRRTIERYITDREVASGYQHVYTPPI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHWD YR +MF        + D   F L+PMNCP H+ V+ + + SYRELP
Sbjct: 299 ASVDLYKTSGHWDHYREDMFPTM----DMGDGEAFVLRPMNCPHHIQVYKNHVHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  +   LII +Y+DF 
Sbjct: 355 IRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQVEDEFKQTLQLIIDVYEDFN 414

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R      K    D +W+ ++ ++K  +D +       ++     GE AFY
Sbjct: 415 ITDYSFRLSYRDPADTHKYFDDDEMWEKSQRMLKAAMDDMG------LDYYEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G D    TIQ+DF LP RF   Y+ +  E+  PVMIHR +  ++ERF 
Sbjct: 469 GPKLDIQVKTALGNDETLSTIQLDFLLPERFELTYIGADGEEHRPVMIHRGIVSTMERFT 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
             +IE +KG  P WL+P Q  V  +++ A  +YA E+A  L++H + ++ D RNE + YK
Sbjct: 529 AYLIETYKGAFPTWLAPHQVTVIPVSNEAHADYAWEVAKELRNHGVRVDVDERNEKMQYK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           IR+    KIP  +I GDKE +++S+ +RR+GS  T   SL
Sbjct: 589 IRQSQTHKIPYQLIVGDKEMADKSVNVRRYGSKQTHTESL 628


>gi|312886253|ref|ZP_07745867.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Mucilaginibacter
           paludis DSM 18603]
 gi|311301278|gb|EFQ78333.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Mucilaginibacter
           paludis DSM 18603]
          Length = 641

 Score =  527 bits (1358), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 273/648 (42%), Positives = 412/648 (63%), Gaps = 19/648 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           I +T PDGS++ +    +   +A SIS  LA+  +A  +NG+V D S  +  +  ++++T
Sbjct: 2   INITLPDGSVRQYEQGTSSYQIALSISEGLARNVLAAEVNGEVWDASRQIETDAHVKLLT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQI 122
             D +  A   HS AH+MAEA+++++P  +  IGP IE GFYYD D  ++ FSSDE  +I
Sbjct: 62  WNDVQGKATYWHSSAHLMAEALEALYPGTKFGIGPAIETGFYYDVDFGDREFSSDEFKKI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E K+ E+    S F+++ +S   A E F  K + YK+++++ +P   ++T Y QG + DL
Sbjct: 122 EDKIIELAKTKSDFVRKPVSKADAIEYFTEKDDEYKLDLIKDLPDG-SITFYTQGNFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ +TG +K   KLM VAGAYWRGD +R  L+RIY   +    ELT YL+ +EE++
Sbjct: 181 CRGPHIPNTGFIKAV-KLMSVAGAYWRGDESRKQLTRIYAVTFPKASELTDYLHLIEEAK 239

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           KRDHRKL +E++LF  +E  G G+  W  KG  + + L++++++ ++K  YE++ TP + 
Sbjct: 240 KRDHRKLGKELELFAFSEKVGMGLPLWLPKGTALRERLVNFLQKAQVKAGYEQVITPHIG 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            ++L+  SGH++ Y A+ F       T ++   F LKPMNCP H  ++    +SY++LPV
Sbjct: 300 HKNLYVTSGHYEKYGADSFQ---PIKTPQEGEEFFLKPMNCPHHCEIYKTKPRSYKDLPV 356

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R AEFG+VYR E SG LHGL RVRGFTQDDAH+FC  +Q+  E  K+ +L++ ++   GF
Sbjct: 357 RFAEFGTVYRYEQSGELHGLTRVRGFTQDDAHLFCRPDQVKEEFKKVIDLVLYVFNALGF 416

Query: 421 EKIMVKLSTR-PE---KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           +    ++S R PE   K +G+D  W  AE  +      I+++ +  + T  + GE AFYG
Sbjct: 417 KDYTAQVSLRDPENKAKYIGTDENWAIAEAAI------IESAEEKGLPTVHVTGEAAFYG 470

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK ++++KDA+GR WQ GTIQVD+NLP RF   Y  S ++K  PVMIHRA FGS+ERFI 
Sbjct: 471 PKLDFMVKDALGRKWQLGTIQVDYNLPERFELEYTGSDNQKHRPVMIHRAPFGSMERFIA 530

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           ++IE+  GN PLWLSP Q IV  I+    EYA+++++LLK   +    DFR+E I  KIR
Sbjct: 531 VLIEHCAGNFPLWLSPEQFIVLPISEKYEEYAKKLSDLLKDSDICGLIDFRDEKIGRKIR 590

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  +KKIP ++I G+KE +E  + +R+ G      +S+ +    + KE
Sbjct: 591 DAEVKKIPYMLIVGEKEEAEGMVSVRKHGEGDLGSMSIEEFTQKIKKE 638


>gi|256422752|ref|YP_003123405.1| threonyl-tRNA synthetase [Chitinophaga pinensis DSM 2588]
 gi|256037660|gb|ACU61204.1| threonyl-tRNA synthetase [Chitinophaga pinensis DSM 2588]
          Length = 646

 Score =  527 bits (1358), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 264/627 (42%), Positives = 404/627 (64%), Gaps = 19/627 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           I +T PDG+++ +    T  DVA+SIS  LA+K +A   NG+V D S P+  +G+++++T
Sbjct: 2   INITLPDGAVRQYEAGVTAMDVAKSISEGLARKVLAAKFNGEVTDASRPITTDGTLQLLT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQI 122
             D    + + HS AH+MAEA+++++P V++ IGP IE+GFYYD D   +  S ++L +I
Sbjct: 62  WNDTDGKSTMWHSSAHLMAEALEALYPGVKLGIGPAIENGFYYDIDLGGRSISEEDLQKI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
             KM E+   +S + ++ +S   A + F  K + YK+E++  +    ++T Y QG + DL
Sbjct: 122 GDKMAELAKNNSVYERREVSKADAEKYFTEKNDEYKLELIRDL-KDGSITFYTQGNFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ +TG +K   KL  +AGAYWRG+    ML+RIYG  + TQ+EL +YL+ +EE++
Sbjct: 181 CRGPHIPNTGFIKAI-KLTNIAGAYWRGNEKNKMLTRIYGITFPTQKELDEYLHLVEEAK 239

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           KRDHRKL +E++LF  +E  G G+  W  KG  + + L S++++ +I+  Y  + TP + 
Sbjct: 240 KRDHRKLGKELELFTFSEKVGLGLPLWLPKGAMLRERLQSFLQKAQIESGYMPVVTPHIG 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +++L+  SGH++ Y  + F       T ++   F LKPMNCP H  ++    KSY++LPV
Sbjct: 300 NKNLYITSGHYEKYGKDSFQ---PIHTPEEGEEFMLKPMNCPHHCEIYKSSPKSYKDLPV 356

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R AEFG+VYR E  G LHGL RVRGFTQDDAH+FC  +Q+  E  K+ +L++ +++   F
Sbjct: 357 RFAEFGTVYRYEQHGELHGLTRVRGFTQDDAHLFCRPDQVKEEFCKVIDLVLYVFQSLNF 416

Query: 421 EKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
                ++S R +    K +GSD  W+ AE  +      I+++++  + T V  GE AFYG
Sbjct: 417 TDYTAQISLRDQEDRAKYIGSDENWNLAEQAI------IESAAEKGLKTVVEYGEAAFYG 470

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK ++++KDA+GR WQ GTIQVD+NLP RF   YV + ++K  PVMIHRA FGS+ERFI 
Sbjct: 471 PKLDFMVKDALGRKWQLGTIQVDYNLPERFELEYVGADNQKHRPVMIHRAPFGSLERFIA 530

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           ++IE+  G  PLWL+P Q  +  I+    EYA+++A LLK+  +  E D R+E I  KIR
Sbjct: 531 VLIEHCGGKFPLWLTPTQVKILPISDKNQEYAEKVAELLKNVEIRAEIDDRSEKIGKKIR 590

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRR 623
           E  + KIP +++ G+KEA+E  + +RR
Sbjct: 591 ETELAKIPYMLVIGEKEAAESKVAVRR 617


>gi|315222497|ref|ZP_07864386.1| threonyl-tRNA synthetase [Streptococcus anginosus F0211]
 gi|315188183|gb|EFU21909.1| threonyl-tRNA synthetase [Streptococcus anginosus F0211]
          Length = 650

 Score =  527 bits (1358), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 263/644 (40%), Positives = 415/644 (64%), Gaps = 23/644 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+TFPDG+++ +   +T  D+A+SIS SLAKKA+A   NGK+ D + P+ E GSIEI+T
Sbjct: 2   IKITFPDGAVREYESGSTTFDIAQSISNSLAKKALAGKFNGKLIDTTRPITEDGSIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQI 122
           P+   +L ++RHS AH+ A+A + ++P++ + +GP I+DGFYYD D      S+++L +I
Sbjct: 62  PDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIQDGFYYDTDNAAGQISNEDLPRI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWFD 181
           E++M++I+  + P +++ ++ ++ARE+F  K + YK+E++E     E  +T+YRQGE+ D
Sbjct: 122 EEEMKKIVKENFPSIREEVTKDQAREIF--KNDPYKLELIEEHSEDEGGLTIYRQGEYVD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++  F L+ VAGAYWRG+S+  M+ RIYGTAW  +++L  YL   EE+
Sbjct: 180 LCRGPHVPSTGRIQ-IFHLLNVAGAYWRGNSDNAMMQRIYGTAWFDKKDLKNYLQMREEA 238

Query: 242 EKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+ E G G+ FW   G  I + +  Y+  R++ D Y+ + TP +
Sbjct: 239 KERDHRKLGKELDLFMISPEVGQGLPFWLPDGATIRRIVERYITDREVNDGYQHVYTPPL 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHW+ Y+ +MF        + D   F L+PMNCP H+ V+ + + SYRELP
Sbjct: 299 ASVDLYKTSGHWEHYQEDMFPPM----DMGDGEQFVLRPMNCPHHIEVYKNHVHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  T +D+H+F   EQ+  E   + +L+I +YKDF 
Sbjct: 355 IRIAELGMMHRFEKSGALSGLQRVREMTLNDSHLFVMPEQIQEEFKHVLDLMIDVYKDFN 414

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R      K   +D +W++A+ ++KG +D +       ++     GE AFY
Sbjct: 415 ITDYRFRLSYRDPNDKHKYFDNDEMWENAQRMLKGAMDDLG------LDYFEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G +    TIQ+DF LP RF+  Y+ +  E+  PVMIHR +  ++ERFI
Sbjct: 469 GPKLDVQVKTALGNEETLSTIQLDFLLPERFDLHYIGADGEEHRPVMIHRGIVSTMERFI 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
             +IE +KG  P WL+P Q  V  I++ A  +YA ++A  L++  + ++ D RNE + YK
Sbjct: 529 AYLIETYKGAFPTWLAPHQVTVIPISNEAHADYAWKVAKELRNRGVRVDVDERNEKMQYK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           IR+    K+P  +I GDKE ++ ++ +RR+GS  T   ++ + +
Sbjct: 589 IRQSQTHKVPYQLIVGDKEQADGTVNVRRYGSKQTHTETVAEFV 632


>gi|312863291|ref|ZP_07723529.1| threonine--tRNA ligase [Streptococcus vestibularis F0396]
 gi|311100827|gb|EFQ59032.1| threonine--tRNA ligase [Streptococcus vestibularis F0396]
          Length = 648

 Score =  527 bits (1358), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 269/641 (41%), Positives = 409/641 (63%), Gaps = 25/641 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           I +TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  + E GSIEI+T
Sbjct: 2   INITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRTITEDGSIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQI 122
           P+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D E    S+++L +I
Sbjct: 62  PDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNEAGQISNEDLPRI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWFD 181
           E++M++I+  + P +++ ++ ++ARE+F  K + YK+E++E     E  +T+YRQGE+ D
Sbjct: 122 EEEMKKIVKENFPSIREEVTKDEAREIF--KNDPYKLELIEEHSEDEGGLTIYRQGEYVD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++  F L+ VAGAYWRG+S+  M+ RIYGTAW  +++L  YL  LEE+
Sbjct: 180 LCRGPHVPSTGRIQ-VFHLLNVAGAYWRGNSDNAMMQRIYGTAWFDKKDLKAYLKRLEEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+++ G G+ FW   G  I + L  Y+  +++   Y+ + TP +
Sbjct: 239 KERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVDKEVAAGYQHVYTPPI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHWD YR +MF        + D   F L+PMNCP H+ V+ H + SYRELP
Sbjct: 299 ASVELYKTSGHWDHYREDMFPPM----DMGDGEEFVLRPMNCPHHIEVYKHHVHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  + +D H F   EQ+ +E  KI  LII +Y+DF 
Sbjct: 355 IRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHTFVAPEQIEDEFKKILQLIIDVYEDFN 414

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R      K   +D +W++A+ ++K  +D +       +      GE AFY
Sbjct: 415 LTDYRFRLSYRDPADKHKYFDNDEMWENAQRMLKAAVDDMG------VEYYEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G++    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF 
Sbjct: 469 GPKLDIQVKTALGKEETLSTIQLDFLLPERFDLHYIGADGEEHRPVMIHRGVISTMERFT 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IEN+KG  P WL+P Q  +  +++   V+YA E+A  L+   +  E D RNE + +K
Sbjct: 529 AILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAKELRDRGVRAEVDERNEKMQFK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFG--STTTQKVS 633
           IR    +KIP  +I GDKE  + ++ +RR+G   T T+ VS
Sbjct: 589 IRASQTQKIPYQLIVGDKEMEDGTVNVRRYGQKQTHTETVS 629


>gi|312879874|ref|ZP_07739674.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Aminomonas
           paucivorans DSM 12260]
 gi|310783165|gb|EFQ23563.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Aminomonas
           paucivorans DSM 12260]
          Length = 631

 Score =  527 bits (1358), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 257/595 (43%), Positives = 387/595 (65%), Gaps = 18/595 (3%)

Query: 31  SRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIW 89
           S  L K  VA  +NG + DLS P+ EG ++E +  +    L ++RHS AH+MA+A++ ++
Sbjct: 26  SWKLGKGVVAARVNGVLVDLSTPLTEGGTVEPVAGDCEEGLEILRHSAAHLMAQAIRRLF 85

Query: 90  PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKAREL 149
           PE +  IGP ++DGFYYD    +  + ++L  I+ +M  I+  D    ++ L  E+   L
Sbjct: 86  PEARFGIGPAVKDGFYYDVLPPRALTEEDLPVIQAEMDRIVQEDVRVERRVLPREEVIRL 145

Query: 150 FESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWR 209
           F  + E +K+E+L  IP  E ++ Y QG++ DLCRGPHV ST  ++   KL+ +AGAYWR
Sbjct: 146 FRQRGEIFKLELLGEIP-DEEISTYWQGDFVDLCRGPHVPSTSLLRHV-KLLSLAGAYWR 203

Query: 210 GDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWH 269
           G+    ML+RIYGTA+  +  L Q+L  LEE+++RDHRKL RE+DLF +  +  G  F+H
Sbjct: 204 GNEKNVMLTRIYGTAFGDKASLEQHLKRLEEAKQRDHRKLGRELDLFSLQPEAPGFPFFH 263

Query: 270 RKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTI 328
            KG  +   L+++ +R+  +  Y EI TP +LD+ LW++SGHWD YR NM+       T 
Sbjct: 264 PKGMVVLGELVNFWKREHQRRGYCEIRTPLILDRALWERSGHWDHYRDNMYF------TT 317

Query: 329 KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQ 388
            D R FA+KPMNCPG + VF    +SYR+LP+R+ E G+V+R+E SG LHGLMRVR FTQ
Sbjct: 318 IDERPFAIKPMNCPGGILVFKSSTRSYRDLPLRMGELGTVHRHERSGVLHGLMRVRCFTQ 377

Query: 389 DDAHVFCTKEQMFNECLKIHNLIISIYKD-FGFEKIMVKLSTRPEKRVGSDALWDDAENI 447
           DDAH++CT +Q+  E   + +L+  +YKD FGF    V+LSTRPE  +G  +LW+ AE  
Sbjct: 378 DDAHLYCTPDQVAQEIAGVIDLMRYVYKDVFGF-PYRVELSTRPENYMGELSLWNLAEQK 436

Query: 448 MKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFN 507
           ++  L+     +  ++N G    +GAFYGPK ++ L+D IGR WQCGTIQ+DF +P +F+
Sbjct: 437 LQEALEA--TGTPYKVNPG----DGAFYGPKIDFHLEDCIGRTWQCGTIQLDFQMPEKFD 490

Query: 508 AFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEY 567
             Y+     +  PVM+HR VFGS+ERF+GI+IE++ G  P WL+P+QA +  +++  + Y
Sbjct: 491 VAYIGPDGAEHRPVMLHRTVFGSLERFLGILIEHYAGAFPYWLAPVQAKILPVSTDLLPY 550

Query: 568 AQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           A+E+  +L+S  +  ETD R E +  KIR+  + K+P +++ G +EA  R++ +R
Sbjct: 551 AREVEGILQSWGVRTETDTREEKLGRKIRDAQLSKVPYMLVLGGREAESRTVAVR 605


>gi|15459130|gb|AAL00276.1| Threonyl-tRNA synthetase 1 [Streptococcus pneumoniae R6]
          Length = 660

 Score =  527 bits (1357), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 265/640 (41%), Positives = 405/640 (63%), Gaps = 23/640 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           I +TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  + E GSIEI+T
Sbjct: 15  INITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGSIEIVT 74

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQI 122
           P+   +L ++RHS  H+ A+A + ++P++ + +GP IEDGFYYD D      S+++L +I
Sbjct: 75  PDHEDALPILRHSATHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDHTAGQISNEDLPRI 134

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWFD 181
           E++MQ+I+  + P +++ ++ ++ARE+F  K + YK+E++E     E  +T+YRQGE+ D
Sbjct: 135 EEEMQKIVKENFPSIREEVTKDEAREIF--KNDPYKLELIEEHSEDEGGLTIYRQGEYVD 192

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++  F L+ VAGAYWRG+S+  M+ RIYGTAW  +++L  YL   EE+
Sbjct: 193 LCRGPHVPSTGRIQ-IFHLLHVAGAYWRGNSDNAMMQRIYGTAWFDKKDLKNYLQMREEA 251

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+++ G G+ FW   G  I + L  Y+  +++   Y+ + TP +
Sbjct: 252 KERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVNKELVSGYQHVYTPPL 311

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHWD Y+ +MF        + D   F L+PMNCP H+ VF H + SYRELP
Sbjct: 312 ASVELYKTSGHWDHYQEDMFPTM----DMGDGEEFVLRPMNCPHHIQVFKHHVHSYRELP 367

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y+DF 
Sbjct: 368 IRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYEDFN 427

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R      K   +D +W++A+ +++  LD +       ++     GE AFY
Sbjct: 428 LTDYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAFY 481

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G++    TIQ+DF LP RF+  Y+ +  E   PVMIHR V  ++ERF 
Sbjct: 482 GPKLDIQIKTALGKEETLSTIQLDFLLPERFDLKYIGADGEDHRPVMIHRGVISTMERFT 541

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IEN+KG  P WL+P Q  +  +++   V+YA E+A  L+   +  + D RNE + +K
Sbjct: 542 AILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAKKLRDRGVRADVDERNEKMQFK 601

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           IR     KIP  +I GDKE  + ++ +RR+G   TQ VS+
Sbjct: 602 IRASQTSKIPYQLIVGDKEMEDETVNVRRYGQKETQTVSV 641


>gi|206603264|gb|EDZ39744.1| Threonyl-tRNA synthetase [Leptospirillum sp. Group II '5-way CG']
          Length = 617

 Score =  527 bits (1357), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 271/626 (43%), Positives = 383/626 (61%), Gaps = 23/626 (3%)

Query: 30  ISRSLAKKAVAVAINGKVCDLSDPV--REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQS 87
           +S  L K + +V+   +V   S P+  R  S + +T ++  SL  +RHS AH +A+AV+ 
Sbjct: 1   MSGFLGKTSGSVSATRRV---SIPLTERRMSPKSMTEKETESLKALRHSAAHTLAQAVKK 57

Query: 88  IWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKAR 147
           ++P  QV IGP  E+GFYYDF  E+PF+ ++L +IE +M+ +I    P +++ +S  +A 
Sbjct: 58  LYPSAQVGIGPATEEGFYYDFRYERPFTPEDLERIENEMKSLIRSSLPIVRKPVSRGEAE 117

Query: 148 ELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAY 207
           +LF  + E +K+E+++ IP    +T+Y QGE+ DLCRGPHV STG++    +L+  + AY
Sbjct: 118 KLFRERNEPFKLELIQGIPEDAEITVYEQGEFVDLCRGPHVSSTGEIPAV-RLLSTSSAY 176

Query: 208 WRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFH-IAEDGSGVI 266
           W+G  + P L RIYGTA+++++EL  YL   EE ++RDHRKL RE+ LF  + E G+G++
Sbjct: 177 WKGVESNPSLQRIYGTAFHSEKELADYLRQQEEVQRRDHRKLGRELGLFRTLDEKGAGLV 236

Query: 267 FWHRKGWKIFQTLISYMRRKIKDD---YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKC 323
            W  KG +I +TL      KI  D   Y  + TP +    LW QSGHWD Y+ +MF    
Sbjct: 237 LWLPKGSQIRRTLEELW--KILHDRHGYRYVYTPHIARLDLWMQSGHWDYYQDSMFRPME 294

Query: 324 ADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRV 383
            + T      + LKPMNCP H+ +F   ++SYR+LP+RL+E G+VYR E SG+LHGLMRV
Sbjct: 295 TEGT-----AYELKPMNCPFHILIFRESVQSYRDLPIRLSELGTVYRYERSGTLHGLMRV 349

Query: 384 RGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDD 443
           RGFTQDDAH+FC  E +  E   +  L+  +   FGF    V LSTRPEK VGSD  W+ 
Sbjct: 350 RGFTQDDAHIFCKPEDLAGEIRNVLALVDQMIGRFGFTDRTVYLSTRPEKSVGSDENWEM 409

Query: 444 AENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLP 503
           A   ++  L+      +  I   V  GEG FYGPK +    DAIGR WQ  TIQVDFNLP
Sbjct: 410 ATGSLRKALE------ESGIPYEVDPGEGVFYGPKIDIKFHDAIGRAWQLSTIQVDFNLP 463

Query: 504 SRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSS 563
            +F+  Y N   E C P+MIHRA+FGSIERF GI+IE++ G  PLWL+P Q  + TI   
Sbjct: 464 EKFDLTYRNDSGEPCRPIMIHRALFGSIERFFGILIEHYAGAFPLWLAPEQVRIMTIADR 523

Query: 564 AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRR 623
            + YAQ + + LK   +  E DFRNE I +K+RE  ++KIP + + GD+E  E  + +R 
Sbjct: 524 HIPYAQTVLSRLKDRGVRAEGDFRNEKIGFKVREAQMEKIPEMWVVGDREVEETRVSVRS 583

Query: 624 FGSTTTQKVSLLDAIPILTKESLPPD 649
                     L   +  L + S PP+
Sbjct: 584 REGEKKDLCPLESELEDLFRRSFPPE 609


>gi|307705352|ref|ZP_07642214.1| threonyl-tRNA synthetase [Streptococcus mitis SK597]
 gi|307621139|gb|EFO00214.1| threonyl-tRNA synthetase [Streptococcus mitis SK597]
          Length = 647

 Score =  527 bits (1357), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 266/644 (41%), Positives = 408/644 (63%), Gaps = 23/644 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           I +TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  + E GSIEI+T
Sbjct: 2   INITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRTITEDGSIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQI 122
           P+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D      S+++L +I
Sbjct: 62  PDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNTAGQISNEDLPRI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWFD 181
           E++MQ+I+  + P +++ ++ ++ARE+F  K + YK+E++E     E  +T+YRQGE+ D
Sbjct: 122 EEEMQKIVKENFPSIREEVTKDEAREIF--KNDPYKLELIEEHSEDEGGLTIYRQGEYVD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++  F L+ VAGAYWRG+S+  M+ RIYGTAW  +++L  YL   EE+
Sbjct: 180 LCRGPHVPSTGRIQ-IFHLLHVAGAYWRGNSDNAMMQRIYGTAWFDKKDLKNYLQMREEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+++ G G+ FW   G  I + L  Y+  +++   Y+ + TP +
Sbjct: 239 KERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVDKELASGYQHVYTPPL 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHWD Y+ +MF        + D   F L+PMNCP H+ VF H + SYRELP
Sbjct: 299 ASVELYKTSGHWDHYQEDMFPTM----DMGDGEEFVLRPMNCPHHIQVFKHHVHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y DF 
Sbjct: 355 IRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYGDFN 414

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
             +   +LS R      K   +D +W++A+ +++  LD +       ++     GE AFY
Sbjct: 415 LNEYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G++    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF 
Sbjct: 469 GPKLDIQVKTALGKEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMIHRGVISTMERFT 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IEN+KG  P WL+P Q  +  +++   V+YA E+A  L+   +  + D RNE + +K
Sbjct: 529 AILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAKKLRDRGVRADVDERNEKMQFK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           IR     KIP  +I GDKE  + ++ +RR+G   TQ V + D +
Sbjct: 589 IRASQTSKIPYQLIVGDKEMEDGTVNVRRYGQKETQTVLVDDFV 632


>gi|55981844|ref|YP_145141.1| threonyl-tRNA synthetase [Thermus thermophilus HB8]
 gi|7388285|sp|P56881|SYT_THET8 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|6689424|emb|CAB65483.1| threonyl-tRNA synthetase [Thermus thermophilus]
 gi|55773257|dbj|BAD71698.1| threonyl-tRNA synthetase [Thermus thermophilus HB8]
          Length = 659

 Score =  527 bits (1357), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 263/636 (41%), Positives = 406/636 (63%), Gaps = 25/636 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           + +  PDG     P  AT  DVA ++     ++AV   ++G++ DL  P+ +G+ + ++T
Sbjct: 1   MTVYLPDGKPLELPEGATAKDVARALGEGWERRAVGAIVDGELYDLLKPLPQGAKVRLLT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPE-------VQVAIGPIIEDGFYYDFDKEQPFSS 116
            +DP    + RH+ AH++A+AV+  + E       V++ +GP+IE GFYYD +  +P S 
Sbjct: 61  EKDPEFQTLFRHTLAHVLAQAVKEFFREKGYDPESVRLGVGPVIEKGFYYDIEAPEPLSD 120

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
           ++L  IE KM+EI+ RD P  +  LS E+A   +  K + YK E++  IP  E ++ Y+Q
Sbjct: 121 EDLPAIEAKMREILKRDLPLRRFVLSREEALARYRGK-DPYKTELVLEIPEGEEISFYQQ 179

Query: 177 GE----WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELT 232
           G+    + DLCRGPHV STG++   FKL  VAGAYWRGD NRPML R+YG A+ T +EL 
Sbjct: 180 GDEAYGFTDLCRGPHVPSTGRIPPHFKLTHVAGAYWRGDENRPMLQRVYGVAFRTAEELK 239

Query: 233 QYLYFLEESEKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRR-KIKDD 290
           +YL+ LEE++KRDHR+L RE++LF I    G G++ W  KG  + + L+++MR  +++  
Sbjct: 240 EYLWQLEEAKKRDHRRLGRELELFLIDPLVGKGLVLWLPKGNVVREELMAFMREEQVRRG 299

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH 350
           Y+ + TP +    L++ SGH+  Y  + F      +  ++   + LKPMNCP H+ ++ +
Sbjct: 300 YQLVTTPHIGSLELYKTSGHYPYYAESQFPPISFKERGEE-EEYLLKPMNCPHHIRIYAY 358

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
             +SYRELP+RLAEFG+VYR E +G L GL RVRGFTQDDAH+FCT E++  E L + +L
Sbjct: 359 RKRSYRELPLRLAEFGTVYRYEKAGELLGLTRVRGFTQDDAHIFCTPEEVKGEFLGVLDL 418

Query: 411 IISIYKDFGFEKIMVKLSTR---PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGV 467
           ++ ++   G +    ++  R    +K VG +A W  AE  ++      + +++  +   V
Sbjct: 419 VLKVFATLGLKDYRARIGVRDPKSDKYVGDEAKWALAERQIE------EAAAEAGLRYTV 472

Query: 468 LLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAV 527
             G+ AFYGPK ++++KDA+GR+WQ GTIQVD+NLP RF   YV    E+  PVM+HRA 
Sbjct: 473 EEGDAAFYGPKLDFVVKDALGREWQLGTIQVDYNLPERFGLTYVGKDGEEHRPVMLHRAP 532

Query: 528 FGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR 587
           FGS+ERFIGI+IE+F G+ PLWL+P+QA+V  ++    +YA+E+A  LK   L  E D R
Sbjct: 533 FGSLERFIGILIEHFAGDFPLWLAPVQAVVVPVSEKQEDYAREVAGRLKEAGLRAEADTR 592

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRR 623
            E +  +IR+  ++K+P I++ G++E +E ++ +RR
Sbjct: 593 PERMQARIRDAEVQKVPYILVVGEREKAEGAVSVRR 628


>gi|288905772|ref|YP_003430994.1| Threonyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
 gi|325978807|ref|YP_004288523.1| threonyl-tRNA synthetase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|288732498|emb|CBI14070.1| Threonyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
 gi|325178735|emb|CBZ48779.1| threonyl-tRNA synthetase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
          Length = 648

 Score =  527 bits (1357), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 268/636 (42%), Positives = 409/636 (64%), Gaps = 23/636 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           +K+TFPDG+++ F    T  ++A+SIS SLAKKA+A   NG++ D +  + E GSIEI+T
Sbjct: 2   VKITFPDGAVREFESGVTPFEIAQSISNSLAKKALAGKFNGQLIDTTREITEDGSIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQI 122
           P+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D K    S ++L +I
Sbjct: 62  PDHEDALGILRHSAAHLFAQAAKRLFPDLCLGVGPAIEDGFYYDTDNKAGQISDEDLPRI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWFD 181
           E++M++I+  + P +++ ++ ++ARELF  K + YK+E++E   A E  +T+Y QGE+ D
Sbjct: 122 EEEMKKIVKENFPCIRKEITIDEARELF--KNDPYKLELIEEHGADEGGLTVYSQGEFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++  F L+ VAGAYWRG+S+  M+ R+YGTAW  +++L  YL   +E+
Sbjct: 180 LCRGPHVPSTGRIQ-VFHLLNVAGAYWRGNSDNAMMQRVYGTAWFDKKDLKAYLKQRQEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+++ G G+ FW   G  I +TL  Y+  +++   Y  + TP +
Sbjct: 239 KERDHRKLGKELDLFMISQEVGQGLPFWLPDGATIRRTLERYIVDKEVASGYLHVYTPPL 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHWD YR +MF        + D   F L+PMNCP H+ V+ H + SYRELP
Sbjct: 299 ASVDLYKTSGHWDHYREDMFPTM----DMGDGEEFVLRPMNCPHHIQVYKHHVHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  K   LII +Y+DF 
Sbjct: 355 IRIAEIGMMHRYEKSGALSGLQRVREMSLNDGHLFVTPEQIQEEFQKALQLIIDVYEDFN 414

Query: 420 FEKIMVKLSTRPEKRV----GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
             +   +LS R  K        D +W++A++++K  LD +       +      GE AFY
Sbjct: 415 LTEYRFRLSLRDPKDTHKYYDDDEMWENAQSMLKAALDEMG------VEYFEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G +    TIQ+DF LP RF   Y+ +  E+  PVMIHR V  ++ERF 
Sbjct: 469 GPKLDIQVKTALGNEETLSTIQLDFLLPERFGLTYIGADGEEHRPVMIHRGVISTMERFT 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IEN+KG  P WL+P Q  V  +++ A V+YA E+A +L+   + ++ D RNE +  K
Sbjct: 529 AILIENYKGAFPTWLAPHQVTVIPVSNEAHVDYAWEVAKVLRDKGVRVDVDERNEKMQLK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
           IR+   KKIP  +I GDKE +++++ +RR+GS  T 
Sbjct: 589 IRQSQTKKIPYQLIVGDKEMADKTVNVRRYGSKQTH 624


>gi|299144001|ref|ZP_07037081.1| threonine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str.
           F0131]
 gi|298518486|gb|EFI42225.1| threonine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str.
           F0131]
          Length = 639

 Score =  527 bits (1357), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 265/646 (41%), Positives = 401/646 (62%), Gaps = 17/646 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           M   + +  PDGS K +    T  ++   IS  LA+ AV   +NG+   + D V  +   
Sbjct: 1   MEVKMIVKLPDGSEKVYECSKTVKEITMDISEGLARVAVGAVVNGETLGMKDLVSCDCDF 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            ++  +D     +  H+ +H+MA A+++++   + AIGP I +GFYYD D E  F+ ++L
Sbjct: 61  RVLKFDDKEGKQIFWHTTSHVMAYAIKNLFSGSKFAIGPSIANGFYYDIDVEHRFAPEDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IE +M++II  +    K  L   +A +LF+  ++ YK+E++E I   EN+++Y+ G++
Sbjct: 121 EKIESEMKKIIKSEYEVEKLSLPRAEAIKLFKDLEQNYKLELIEGI-EDENISIYKIGDY 179

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           +DLC+GPH+ +   +K F KL+ +AGAYW+GD N  ML RIYG ++  +++L +Y+  +E
Sbjct: 180 YDLCKGPHLENVKAIKAF-KLLSIAGAYWKGDENNKMLQRIYGISFEKKKQLDEYIERIE 238

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQ 298
           E+EKRDHRKL RE+DLF + ++G G  F+H  G  +   L+ + R   I++ Y EI TP 
Sbjct: 239 EAEKRDHRKLGRELDLFTMHDEGPGFPFFHPNGMILRNELLGWWRNVLIENGYGEIQTPI 298

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L++ LW +SGHWD Y+ NM+  K       D   +A+KPMNCPG   V++    SYREL
Sbjct: 299 ILNEALWHRSGHWDHYKENMYFTKI------DGEDYAVKPMNCPGSTIVYSTNPHSYREL 352

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RL+EFG V+R+E SG+LHGL RVR FTQDDAHV+C   Q+  E  K+ +L   +Y  F
Sbjct: 353 PIRLSEFGQVHRHELSGALHGLFRVRTFTQDDAHVYCLPSQIEEEVFKMIDLADYLYSTF 412

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF K  V+LSTRPE  +G    W+ AE  +K  L+      +  I   +  G+GAFYGPK
Sbjct: 413 GF-KYSVELSTRPEDFMGDIETWNKAEESLKVALE------KKNIKYSINEGDGAFYGPK 465

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++ L+DAIGR WQCGTIQ+DF +P  F+  Y+N   EK  PVM+HRA+ GS+ERF+GI+
Sbjct: 466 IDFHLEDAIGRTWQCGTIQLDFQMPVNFDLTYINEKGEKARPVMLHRALLGSVERFMGIL 525

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+F G  PLWLSPIQ  +  ++    E+A+E+   LK+  L +  D R E + YKIRE 
Sbjct: 526 IEHFAGKFPLWLSPIQVEIIPVSEKFAEFAKELEIKLKNTGLKVYLDERAEKVGYKIREA 585

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            +KKI  +++ G++E +   + +R+      +   + + I IL  E
Sbjct: 586 QLKKINYMLVVGEQEVNSGKLSVRKRNGEEIKDCEVEEFINILKSE 631


>gi|302380527|ref|ZP_07268992.1| threonine--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
 gi|303234012|ref|ZP_07320661.1| threonine--tRNA ligase [Finegoldia magna BVS033A4]
 gi|302311470|gb|EFK93486.1| threonine--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
 gi|302494937|gb|EFL54694.1| threonine--tRNA ligase [Finegoldia magna BVS033A4]
          Length = 634

 Score =  527 bits (1357), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 262/621 (42%), Positives = 387/621 (62%), Gaps = 16/621 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
            ++   DGS K F    +  DV +SIS  LA+  V   ++GK+  L + +  +  ++ + 
Sbjct: 2   FEVKLKDGSAKEFDGEISLLDVCKSISEGLARDCVGAVVDGKIMGLMETIDSDCEVQFVK 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D     V  H+ +H+MA A+Q ++P  + AIGP I+ GFYYD D +  F  ++L +IE
Sbjct: 62  FDDDEGKQVFWHTSSHLMAYAIQRLYPGTKFAIGPSIDSGFYYDLDTDHKFVPEDLEKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M++I+  +   ++  +S ++A E F+++ + YKV+++E+      +TLY  G++ DLC
Sbjct: 122 AEMKKIVKENPKLVRVEISRKEALERFKNEGQDYKVDLIENFDEDATITLYEMGDFVDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+     +K F KL+ +AGAYWRGD N  ML RIYG ++  ++ L +YL  +EE++K
Sbjct: 182 RGPHLLDVKNIKAF-KLLSIAGAYWRGDENNKMLQRIYGISFPKKKLLDEYLDRMEEAKK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRK+ +EM LF I E+G G  F+H  G  +   L  +++ ++ +  Y +I TP +L++
Sbjct: 241 RDHRKIGKEMGLFSIQEEGPGFPFFHPNGMVVLNELEKFLKEQLLERGYGQIKTPLILNE 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
           HLW QSGHWD Y+ NM+  K       D   +A+KPMNCPG + V+   L SYRELP+++
Sbjct: 301 HLWHQSGHWDHYKENMYFTKI------DGEDYAIKPMNCPGSILVYKDELHSYRELPIKV 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AE G V+R+E SG+LHGL RVR F QDDAHVFC  EQ+ +E  KI +    IY  FGF K
Sbjct: 355 AELGQVHRHELSGALHGLFRVRTFVQDDAHVFCLPEQIEDEVSKIIDFCDYIYSKFGF-K 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +GSD  WD A + +K  L+        +IN G    +GAFYGPK ++ 
Sbjct: 414 YEVELSTRPEDSMGSDEDWDLAISSLKNALE--HKGLPYKINEG----DGAFYGPKIDFH 467

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+DAIGR WQCGTIQ+DF +P RF+  Y+ S   K  P MIHRA+ GS ERF+GI+IE++
Sbjct: 468 LEDAIGRTWQCGTIQLDFQMPERFDMTYIASDGSKKRPAMIHRAILGSEERFMGILIEHY 527

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  PLWLSP+Q  +  I+    +YA E+   +K+  L ++ D R+E I  KIRE  +KK
Sbjct: 528 AGKFPLWLSPVQVEILPISDKFNDYAYELQQKMKARGLRVKVDDRSEKIGLKIRESQLKK 587

Query: 603 IPIIIICGDKEASERSIGIRR 623
           +   +I G  E     + +R+
Sbjct: 588 VNYSLIIGQNEIDNNEVSVRK 608


>gi|306833981|ref|ZP_07467104.1| threonine--tRNA ligase [Streptococcus bovis ATCC 700338]
 gi|304423847|gb|EFM26990.1| threonine--tRNA ligase [Streptococcus bovis ATCC 700338]
          Length = 666

 Score =  527 bits (1357), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 268/636 (42%), Positives = 409/636 (64%), Gaps = 23/636 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           +K+TFPDG+++ F    T  ++A+SIS SLAKKA+A   NG++ D +  + E GSIEI+T
Sbjct: 20  VKITFPDGAVREFESGVTPFEIAQSISNSLAKKALAGKFNGQLIDTTREITEDGSIEIVT 79

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQI 122
           P+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D K    S ++L +I
Sbjct: 80  PDHEDALGILRHSAAHLFAQAAKRLFPDLCLGVGPAIEDGFYYDTDNKAGQISDEDLPRI 139

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWFD 181
           E++M++I+  + P +++ ++ ++ARELF  K + YK+E++E   A E  +T+Y QGE+ D
Sbjct: 140 EEEMKKIVKENFPCIRKEITIDEARELF--KNDPYKLELIEEHGADEGGLTVYSQGEFTD 197

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++  F L+ VAGAYWRG+S+  M+ R+YGTAW  +++L  YL   +E+
Sbjct: 198 LCRGPHVPSTGRIQ-VFHLLNVAGAYWRGNSDNAMMQRVYGTAWFDKKDLKAYLKQRQEA 256

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+++ G G+ FW   G  I +TL  Y+  +++   Y  + TP +
Sbjct: 257 KERDHRKLGKELDLFMISQEVGQGLPFWLPDGATIRRTLERYIVDKEVASGYLHVYTPPL 316

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHWD YR +MF        + D   F L+PMNCP H+ V+ H + SYRELP
Sbjct: 317 ASVDLYKTSGHWDHYREDMFPTM----DMGDGEEFVLRPMNCPHHIQVYKHHVHSYRELP 372

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  K   LII +Y+DF 
Sbjct: 373 IRIAEIGMMHRYEKSGALSGLQRVREMSLNDGHLFVTPEQIQEEFQKALQLIIDVYEDFD 432

Query: 420 FEKIMVKLSTRPEKRV----GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
             +   +LS R  K        D +W++A++++K  LD +       +      GE AFY
Sbjct: 433 LTEYRFRLSLRDPKDTHKYYDDDEMWENAQSMLKAALDEMG------VEYFEAEGEAAFY 486

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G +    TIQ+DF LP RF   Y+ +  E+  PVMIHR V  ++ERF 
Sbjct: 487 GPKLDIQVKTALGNEETLSTIQLDFLLPERFGLTYIGADGEEHRPVMIHRGVISTMERFT 546

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IEN+KG  P WL+P Q  V  +++ A V+YA E+A +L+   + ++ D RNE +  K
Sbjct: 547 AILIENYKGAFPTWLAPHQVTVIPVSNEAHVDYAWEVAKVLRDKGVRVDVDERNEKMQLK 606

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
           IR+   KKIP  +I GDKE +++++ +RR+GS  T 
Sbjct: 607 IRQSQTKKIPYQLIVGDKEMADKTVNVRRYGSKQTH 642


>gi|116515338|ref|YP_816901.1| threonyl-tRNA synthetase [Streptococcus pneumoniae D39]
 gi|161410743|ref|NP_359065.2| threonyl-tRNA synthetase [Streptococcus pneumoniae R6]
 gi|73621971|sp|Q8DNX8|SYT_STRR6 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|122278253|sp|Q04JD7|SYT_STRP2 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|116075914|gb|ABJ53634.1| threonyl-tRNA synthetase [Streptococcus pneumoniae D39]
          Length = 647

 Score =  526 bits (1356), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 265/640 (41%), Positives = 405/640 (63%), Gaps = 23/640 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           I +TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  + E GSIEI+T
Sbjct: 2   INITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGSIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQI 122
           P+   +L ++RHS  H+ A+A + ++P++ + +GP IEDGFYYD D      S+++L +I
Sbjct: 62  PDHEDALPILRHSATHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDHTAGQISNEDLPRI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWFD 181
           E++MQ+I+  + P +++ ++ ++ARE+F  K + YK+E++E     E  +T+YRQGE+ D
Sbjct: 122 EEEMQKIVKENFPSIREEVTKDEAREIF--KNDPYKLELIEEHSEDEGGLTIYRQGEYVD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++  F L+ VAGAYWRG+S+  M+ RIYGTAW  +++L  YL   EE+
Sbjct: 180 LCRGPHVPSTGRIQ-IFHLLHVAGAYWRGNSDNAMMQRIYGTAWFDKKDLKNYLQMREEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+++ G G+ FW   G  I + L  Y+  +++   Y+ + TP +
Sbjct: 239 KERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVNKELVSGYQHVYTPPL 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHWD Y+ +MF        + D   F L+PMNCP H+ VF H + SYRELP
Sbjct: 299 ASVELYKTSGHWDHYQEDMFPTM----DMGDGEEFVLRPMNCPHHIQVFKHHVHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y+DF 
Sbjct: 355 IRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYEDFN 414

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R      K   +D +W++A+ +++  LD +       ++     GE AFY
Sbjct: 415 LTDYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G++    TIQ+DF LP RF+  Y+ +  E   PVMIHR V  ++ERF 
Sbjct: 469 GPKLDIQIKTALGKEETLSTIQLDFLLPERFDLKYIGADGEDHRPVMIHRGVISTMERFT 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IEN+KG  P WL+P Q  +  +++   V+YA E+A  L+   +  + D RNE + +K
Sbjct: 529 AILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAKKLRDRGVRADVDERNEKMQFK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           IR     KIP  +I GDKE  + ++ +RR+G   TQ VS+
Sbjct: 589 IRASQTSKIPYQLIVGDKEMEDETVNVRRYGQKETQTVSV 628


>gi|258592606|emb|CBE68915.1| Threonyl-tRNA synthetase (Threonine--tRNA ligase) (ThrRS) [NC10
           bacterium 'Dutch sediment']
          Length = 680

 Score =  526 bits (1356), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 263/669 (39%), Positives = 397/669 (59%), Gaps = 39/669 (5%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           I +T  DG    F    T   V E++  +  K+A+   +NG++ DL  P+ E + +E+I 
Sbjct: 9   IVVTLDDGRRHEFSSGVTVLAVLEAVDPAAKKEAIGANVNGRLVDLCSPIEEDARVELIG 68

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
              P  L+++RHS AH+MA AVQ + P  + AIGP I+DGFYYD +  +P + D+L  IE
Sbjct: 69  ITSPEGLSMLRHSAAHLMAAAVQKLLPSSKFAIGPAIQDGFYYDIEPPRPLTQDDLPAIE 128

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESI------------------ 165
             M+E+  +  PF++  +  ++A     +  + YK+E+LE+I                  
Sbjct: 129 AAMRELSEQRLPFVRCEVPLDEAIAKVAALNQPYKIELLETIRDRVTAPSGPVQEDELEH 188

Query: 166 ---PAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYG 222
              PA +  + Y  G++ DLCRGPHV  T  V +FF+L  +AGAYWRGD  RPML+RIYG
Sbjct: 189 EVDPAAQRASFYTTGDFIDLCRGPHVLDT-SVVRFFRLTHLAGAYWRGDERRPMLTRIYG 247

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLIS 281
            A+ TQ+ L  +L+ LEE+++RDHR+L RE++LF + ++ G G++ WH KG  + + LI 
Sbjct: 248 IAFPTQEALEAHLFLLEEAKRRDHRRLGRELELFSVHDEIGGGLVLWHPKG-ALVRKLIE 306

Query: 282 YMRRK--IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPM 339
            + R+  +K+ Y+ + TP V    LW+ SGH D Y+  M+     +        + +KPM
Sbjct: 307 DLWREQHLKNGYDLVYTPHVGRATLWETSGHLDFYQEFMYPRMEMEGN-----DYYVKPM 361

Query: 340 NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQ 399
           NCP H+ +F   + SYRELPVR AE G+VYR E +G LHGL+RVRGFTQDDAH+FCT +Q
Sbjct: 362 NCPFHIKLFQSKVHSYRELPVRFAELGTVYRFERAGVLHGLLRVRGFTQDDAHIFCTPQQ 421

Query: 400 MFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSS 459
           M +E  +  +  ++    FGF++    ++TRPEK +G   LW+DA   ++   D    + 
Sbjct: 422 MVSEVARAVSFSLAFLSSFGFDRYDAYIATRPEKAIGDQELWNDATEALRRAADDAGLAY 481

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
           Q      +  G GAFYGPK +  ++DA+GR WQC T+Q DFNLP RF+  YV   +    
Sbjct: 482 Q------IDDGGGAFYGPKIDLKVRDALGRAWQCTTVQFDFNLPERFDITYVGEDNRPHR 535

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH 579
           P M+HRA+ GS+ERF G+++E+  G  P WL+P+QA +  +      YAQ+++  L++  
Sbjct: 536 PFMVHRAILGSLERFFGVLVEHHAGAFPTWLAPVQARLVPVADRFQPYAQQVSEQLRAAG 595

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
           +  ETD RNE + YKIR+  ++K P I++ G+KEA+  ++ +R  G      V  +D   
Sbjct: 596 IRTETDVRNEKVGYKIRDAEMQKTPYILVVGEKEATSGAVSVRGRGG-RDMGVMPIDQFA 654

Query: 640 ILTKESLPP 648
              +E L P
Sbjct: 655 AAIQEELKP 663


>gi|317487453|ref|ZP_07946240.1| threonyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
 gi|316921312|gb|EFV42611.1| threonyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
          Length = 646

 Score =  526 bits (1356), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 265/589 (44%), Positives = 370/589 (62%), Gaps = 24/589 (4%)

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           + P  L +IRHS AH+MA AV+ ++P  +V IGP IE+GFYYDFD E PFS D+   IE 
Sbjct: 65  DTPEGLGLIRHSAAHVMAAAVKKLFPAAKVTIGPSIENGFYYDFDVETPFSPDQFEAIEA 124

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
           +MQ II    PF +  +S   A +LF    E YKVE++E +     +TLYR G++ DLCR
Sbjct: 125 EMQRIIDAAVPFERMDISKADAVKLFNDMGEPYKVELIEGLE-DGTITLYRNGDFVDLCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPH+ + G VK F KL+ VAGAYWRGD    MLSRIY TA+   ++L +YL  +EE+++R
Sbjct: 184 GPHIPNAGFVKAF-KLLSVAGAYWRGDEKNRMLSRIYATAFADAKDLKEYLNRIEEAKRR 242

Query: 245 DHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQ 302
           DHRKL +E+DLF   ED  +G++FW  KG  +   L  ++RR+ IK  Y+ +  PQVL +
Sbjct: 243 DHRKLGKELDLFAFHEDVAAGMVFWLPKGMLLRTILEDFLRREHIKRGYQLVQGPQVLRR 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+QSGH+ +YR NM+  +   D       + +KPMNC  H+ ++N  L+SYRELP R 
Sbjct: 303 ELWEQSGHYANYRENMYFTEIEGDM------YGIKPMNCVSHMLIYNAHLRSYRELPQRY 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            E G V+R+E SG LHGL+RVR FTQDDAH+ C  EQ+ +E + +  L+  +   FGF+ 
Sbjct: 357 FELGVVHRHEKSGVLHGLLRVRQFTQDDAHIICAPEQLEDEIIGVIALVRDLMALFGFQY 416

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
            +V +ST+P K +GSD  W+ A N +      IK   +  ++  +  G+GAFYGPK +  
Sbjct: 417 RVV-ISTKPAKAIGSDEAWELATNAL------IKAVERANLSYTINAGDGAFYGPKIDVK 469

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           + DAIGR+WQ  TIQ DF LP RF   YV    E+  PVM+HRA+ GS+ERFIG++ E++
Sbjct: 470 VTDAIGREWQLSTIQCDFTLPERFELEYVGQDGERHRPVMVHRAILGSLERFIGVLTEHY 529

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P+QA + T+T +   +A+E    L+   +  E D RNE + +K+RE  + K
Sbjct: 530 AGAFPTWLAPVQAKILTVTDAQNAFAEEACEALRKQGIRAEVDTRNEKLGFKVREAQLAK 589

Query: 603 IPIIIICGDKEASERSIGIR-RFGSTTTQKVSLLDAIPILTKESLPPDC 650
           IP I++ GDKE   RS+ +R R G      V  LD +  L +E    DC
Sbjct: 590 IPYILVVGDKEVEARSVNVRLRTGENLG--VKSLDEVAALVQE----DC 632


>gi|82751271|ref|YP_417012.1| threonyl-tRNA synthetase [Staphylococcus aureus RF122]
 gi|123768508|sp|Q2YTA7|SYT_STAAB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|82656802|emb|CAI81231.1| threonyl-tRNA synthetase 1 [Staphylococcus aureus RF122]
          Length = 645

 Score =  526 bits (1356), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 267/636 (41%), Positives = 402/636 (63%), Gaps = 21/636 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           I + FPDG+ K F    T  D+A+SIS  L KKAVA   NG++ DL+ P+  +GSIEI+T
Sbjct: 4   INIQFPDGNKKAFDKGTTTEDIAQSISPGLRKKAVAGKFNGQLVDLTKPLETDGSIEIVT 63

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P    +L V+RHS AH+MA A++ ++  V+  +GP+IE GFYYDFD +Q  SSD+  QIE
Sbjct: 64  PVSEEALEVLRHSTAHLMAHAIKRLYGNVKFGVGPVIEGGFYYDFDIDQNISSDDFEQIE 123

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K M++I+  +    ++ +S ++A+ELF +  + YK+E++++IP  ENVTLY QG++ DLC
Sbjct: 124 KTMKQIVNENMKIERKVVSRDEAKELFSN--DEYKLELIDAIPEDENVTLYSQGDFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RG HV ST ++K+F KL+  AGAYWRGDSN  ML RIYGTA+  ++EL  +L  LEE ++
Sbjct: 182 RGVHVPSTAKIKEF-KLLSTAGAYWRGDSNNKMLQRIYGTAFFDKKELKAHLQMLEERKE 240

Query: 244 RDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLD 301
           RDHRK+ +E++LF  ++  G+G+  W   G  I + +  Y+  +++   Y+ + TP + +
Sbjct: 241 RDHRKIGKELELFTNSQLVGAGLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLAN 300

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             L++ SGHWD Y+ +MF     D+T     +  L+PMNCP H+ ++ +   SYRELP+R
Sbjct: 301 VDLYKTSGHWDHYQEDMFPPMQLDET----ESMVLRPMNCPHHMMIYANKPHSYRELPIR 356

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AE G+++R E SG++ GL RVRG T +D+H+F   +Q+  E  ++ N+II +YKDFGFE
Sbjct: 357 IAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVNMIIDVYKDFGFE 416

Query: 422 KIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
               +LS R     EK    D +W+ AEN++K   D +  S ++ I      GE AFYGP
Sbjct: 417 DYSFRLSYRDPEDKEKYFDDDDMWNKAENMLKEAADELGLSYEEAI------GEAAFYGP 470

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  +K A+G++    T Q+DF LP RF+  Y+    E   PV+IHR V  ++ERF+  
Sbjct: 471 KLDVQVKTAMGKEETLSTAQLDFLLPERFDLTYIGQDGEHHRPVVIHRGVVSTMERFVAF 530

Query: 538 MIENFKGNLPLWLSPIQA-IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           + E  KG  P WL+P Q  I+        +YA+++ + LKS  + +  D RNE + YKIR
Sbjct: 531 LTEETKGAFPTWLAPKQVQIIPVNVDLHYDYARQLQDELKSQGVRVSIDDRNEKMGYKIR 590

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
           E  ++K P  I+ GDKE     + +R++GS   + V
Sbjct: 591 EAQMQKTPYQIVVGDKEVENNQVNVRQYGSQDQETV 626


>gi|221320079|ref|ZP_03601373.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           JH642]
          Length = 643

 Score =  526 bits (1356), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 257/642 (40%), Positives = 410/642 (63%), Gaps = 20/642 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSI 59
           M   +K+TFPDG++K F    T  D+A SIS  L KK++A  +NGK  DL  P+ E G++
Sbjct: 1   MSDMVKITFPDGAVKEFAKGTTTEDIAASISPGLKKKSLAGKLNGKEIDLRTPINEDGTV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT      L ++RHS AH++A+ ++ I+ +V+  +GP+IE+GFYYD + ++  + ++L
Sbjct: 61  EIITEGSEEGLQIMRHSAAHLLAQTIKRIYKDVKFGVGPVIENGFYYDVEMDEAITPEDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IEK+M++I+  + P +++ +S E+A+  F    +  K+E+L++IP  E V++Y QGE+
Sbjct: 121 PKIEKEMKKIVNANLPIVRKEVSREEAKARFAEIGDDLKLELLDAIPEGETVSIYEQGEF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRG HV STG++K+ FKL+ +AGAYWRGDS   ML R+YGTA+  + +L ++L  LE
Sbjct: 181 FDLCRGVHVPSTGKIKE-FKLLSLAGAYWRGDSKNQMLQRVYGTAFFKKADLEEHLRMLE 239

Query: 240 ESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTP 297
           E+++RDHRKL +E+ LF  ++  G G+  W  KG  I + +  Y+  ++I   YE + TP
Sbjct: 240 EAKERDHRKLGKELKLFANSQKVGQGLPLWLPKGATIRRVIERYIVDKEISLGYEHVYTP 299

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +  + L++ SGHWD Y+  MF     D+      T  L+PMNCP H+ ++   + SYRE
Sbjct: 300 VLGSKELYETSGHWDHYQEGMFPPMEMDN-----ETLVLRPMNCPHHMMIYKQDIHSYRE 354

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+ +E ++   LI  +Y+D
Sbjct: 355 LPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKDEFIRTVRLIQDVYED 414

Query: 418 FGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           FG      +LS R     EK    D +W+ A++++K  +D I +   +        GE A
Sbjct: 415 FGLSDYTFRLSYRDPEDTEKYFDDDEMWNKAQSMLKEAMDEIGHDYYE------AEGEAA 468

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  +K AIG++    T+Q+DF LP RF+  Y+    ++  PV+IHR V  ++ER
Sbjct: 469 FYGPKLDVQVKTAIGKEETLSTVQLDFLLPERFDLTYIGEDGKQHRPVVIHRGVVSTMER 528

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETIN 592
           F+  +IE  KG LP WL+P+Q  V  ++ +  ++YA+++   L+   L +E D R+E I 
Sbjct: 529 FVAFLIEEHKGALPTWLAPVQFQVIPVSPAVHLDYAKKVQERLQCEGLRVEVDSRDEKIG 588

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           YKIRE  ++KIP +++ GD+EA   ++ +R++G   ++ +SL
Sbjct: 589 YKIREAQMQKIPYMLVVGDQEAENGAVNVRKYGEQNSETISL 630


>gi|313674626|ref|YP_004052622.1| ser-tRNA(thr) hydrolase; threonyl-tRNA synthetase [Marivirga
           tractuosa DSM 4126]
 gi|312941324|gb|ADR20514.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Marivirga
           tractuosa DSM 4126]
          Length = 654

 Score =  526 bits (1356), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 273/646 (42%), Positives = 413/646 (63%), Gaps = 18/646 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
           M + IK+T PDGS+K F    TG D+A SIS  LA+  ++  +NG+V D + P+ E + I
Sbjct: 1   MSNKIKITLPDGSVKEFDKGVTGHDIAMSISEGLARNVLSTKVNGQVWDSTRPINEDAHI 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDE 118
           +++T  DP       HS AH++AEA++ ++P ++  IGP I +GFYYD D  ++    +E
Sbjct: 61  QLLTWNDPEGQNTFWHSSAHLLAEALEDMYPGIKFGIGPPIANGFYYDVDFGDKELQGEE 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L +IE+KM E+  + + + +  +S ++A E ++ K + YK+E++E +   E +T Y+QG 
Sbjct: 121 LEKIEQKMLELARQKNEYKRSEISKKEATEYYQKKGDEYKLELIEGLNDGE-ITFYQQGN 179

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + DLCRGPH+  TG +K   KL+ +AGAYWRGD  R  L+RIYG  +  Q+EL +YL  L
Sbjct: 180 FTDLCRGPHIPHTGYIKAV-KLLNIAGAYWRGDEKRKQLTRIYGITFPKQKELKEYLELL 238

Query: 239 EESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINT 296
           EE++KRDHRKL +EM+LF  +E  G G+  W  KG  +   L +++++ ++K  Y+ + T
Sbjct: 239 EEAKKRDHRKLGKEMELFAFSEKVGLGLPLWLPKGTMLRDRLENFLKKAQVKAGYQPVIT 298

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCA--DDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
           P + ++ L+  SGH++ Y  + F    A  DD  K    + LKPMNCP H  ++    +S
Sbjct: 299 PHIGNKELYITSGHYEKYGKDSFRPIAAPSDDDSKSDEEYLLKPMNCPHHCEIYKTKPRS 358

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           Y++LP+RLAEFG+VYR E SG LHGL RVR FTQDDAH+FC  +Q+  E +K+ +L++ +
Sbjct: 359 YKDLPLRLAEFGTVYRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKEEFIKVIDLVLFV 418

Query: 415 YKDFGFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
           +   GFE  + ++S R     EK +G D +WD AE  +      I+ + +  + T + LG
Sbjct: 419 FNSLGFEDFVTQVSLRDPDNREKYIGGDEVWDKAEKSI------IEAAEEKGLKTVIELG 472

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           E AFYGPK ++++KDA+GR WQ GTIQVD+NLP RF   YV + + K  PVMIHRA FGS
Sbjct: 473 EAAFYGPKLDFMVKDALGRSWQLGTIQVDYNLPERFKLEYVGADNSKHRPVMIHRAPFGS 532

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
           +ERF+ ++IE+  GN PLWLSP Q  V  I+    +YA ++ + L+++ ++   D R+E 
Sbjct: 533 MERFVAVLIEHCAGNFPLWLSPEQVAVLPISEKYADYANKVYSELEANDITGFIDHRDEK 592

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
           I  KIR+  I KIP ++I G++EA+E  + IR+ G      +SL D
Sbjct: 593 IGRKIRDAEINKIPYMLIVGEQEAAEEKVSIRKHGEGDVGNMSLED 638


>gi|227550587|ref|ZP_03980636.1| threonine--tRNA ligase [Enterococcus faecium TX1330]
 gi|257888612|ref|ZP_05668265.1| threonyl-tRNA synthetase [Enterococcus faecium 1,141,733]
 gi|257897010|ref|ZP_05676663.1| threonyl-tRNA synthetase [Enterococcus faecium Com12]
 gi|257898951|ref|ZP_05678604.1| threonyl-tRNA synthetase [Enterococcus faecium Com15]
 gi|293378702|ref|ZP_06624860.1| threonine--tRNA ligase [Enterococcus faecium PC4.1]
 gi|293571021|ref|ZP_06682064.1| threonyl-tRNA synthetase [Enterococcus faecium E980]
 gi|227180295|gb|EEI61267.1| threonine--tRNA ligase [Enterococcus faecium TX1330]
 gi|257824666|gb|EEV51598.1| threonyl-tRNA synthetase [Enterococcus faecium 1,141,733]
 gi|257833575|gb|EEV59996.1| threonyl-tRNA synthetase [Enterococcus faecium Com12]
 gi|257836863|gb|EEV61937.1| threonyl-tRNA synthetase [Enterococcus faecium Com15]
 gi|291608947|gb|EFF38226.1| threonyl-tRNA synthetase [Enterococcus faecium E980]
 gi|292642630|gb|EFF60782.1| threonine--tRNA ligase [Enterococcus faecium PC4.1]
          Length = 647

 Score =  526 bits (1356), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 265/635 (41%), Positives = 404/635 (63%), Gaps = 23/635 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+TFPDG++K F    T   +AESIS+SLAKKA+A  +NGK+ DL+ P+ E  SIEI+T
Sbjct: 2   IKITFPDGAVKEFEAGTTTLAIAESISKSLAKKALAGKVNGKLIDLTRPIEEDASIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQI 122
           P+   +L ++RHS AH+MA+A++ ++P +   +GP I+ GFYYD D  Q   ++++L  I
Sbjct: 62  PDHEDALGLVRHSAAHLMAQAMRRLYPNIHFGVGPAIDSGFYYDTDNGQNQVTAEDLPAI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M +I+  + P  ++ LS ++A E+F S  + YKVE++  +P +E +T Y+QGE+ DL
Sbjct: 122 EAEMMKIVKENLPIERRVLSKQEALEIFAS--DPYKVELISELPEEEVITAYQQGEFIDL 179

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG+++  FKL+ VAGAYWRG+SN  M+ R+YGTA+  ++ L +Y+   EE++
Sbjct: 180 CRGPHVPSTGRIQ-VFKLLSVAGAYWRGNSNNQMMQRVYGTAFFDKKALKEYIRLREEAK 238

Query: 243 KRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVL 300
           +RDHRKL +E+DLF ++ E GSG+ FW  KG  I +T+  Y+  +++   Y+ + TP + 
Sbjct: 239 ERDHRKLGKELDLFMVSPEVGSGLPFWLPKGATIRRTIERYIVDKEVSLGYQHVYTPIMG 298

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D  L++ SGHWD Y+ +MF        + D     L+PMNCP H+ V+ + + SYRELP+
Sbjct: 299 DVELYKTSGHWDHYQEDMFPPM----DMGDGEMLVLRPMNCPHHMMVYKNAIHSYRELPI 354

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  +   L++++Y DF  
Sbjct: 355 RIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVAVYADFNI 414

Query: 421 EKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
                +LS R     +K    DA+W+ A+ ++K  +D ++      ++     GE AFYG
Sbjct: 415 TDYRFRLSYRDPNNTDKYFDDDAMWEKAQAMLKAAMDELE------LDYFEAEGEAAFYG 468

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH-PVMIHRAVFGSIERFI 535
           PK +  +K A+G +    TIQ+DF LP RF+  YV    E  H PV+IHR +  ++ERF+
Sbjct: 469 PKLDVQVKTALGTEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTMERFV 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
             + E +KG  P WL+PIQA +  ++  A  +YA EI   L+   L +E D RNE + YK
Sbjct: 529 AYLTEVYKGAFPTWLAPIQATIIPVSVDAHGDYAYEIKERLQMKGLRVEVDDRNEKMGYK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           IR    +KIP  ++ GDKE  + ++ +RR+GS  T
Sbjct: 589 IRASQTQKIPYQLVVGDKELEDATVNVRRYGSKET 623


>gi|322392280|ref|ZP_08065741.1| threonine--tRNA ligase [Streptococcus peroris ATCC 700780]
 gi|321144815|gb|EFX40215.1| threonine--tRNA ligase [Streptococcus peroris ATCC 700780]
          Length = 647

 Score =  526 bits (1356), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 264/640 (41%), Positives = 407/640 (63%), Gaps = 23/640 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLS-DPVREGSIEIIT 63
           I++TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D + D   +GSIEI+T
Sbjct: 2   IQITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRDITEDGSIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQI 122
           P+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D      S+++L +I
Sbjct: 62  PDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNPAGQISNEDLPRI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWFD 181
           E++M++I+  + P +++ ++ ++ARE+F  K + YK+E++E        +T+YRQGE+ D
Sbjct: 122 EEEMKKIVKENFPSIREEVTKDEAREIF--KNDPYKLELIEEHSEDAGGLTIYRQGEYVD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++  F L+ VAGAYWRG+S+  M+ RIYGTAW  +++L  YL   EE+
Sbjct: 180 LCRGPHVPSTGRIQ-VFHLLNVAGAYWRGNSDNAMMQRIYGTAWFDKKDLKDYLQMREEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+++ G G+ FW   G  I + L  Y+  +++   Y+ + TP +
Sbjct: 239 KERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRILERYIVDKEVAAGYQHVYTPPI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHWD YR +MF        + D   F L+PMNCP H+ V+ H + SYRELP
Sbjct: 299 ASVELYKTSGHWDHYREDMFPPM----DMGDGEEFVLRPMNCPHHIEVYKHHVHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  + +D H F   EQ+ +E  KI  LII +Y+DF 
Sbjct: 355 IRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHTFVAPEQIEDEFKKILQLIIDVYEDFN 414

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R      K   +D +W++A+ ++K  +D +       +      GE AFY
Sbjct: 415 LTDYRFRLSYRDPADKHKYFDNDEMWENAQRMLKAAVDDMG------VEYYEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G++    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF 
Sbjct: 469 GPKLDIQMKTALGKEETLSTIQLDFLLPERFDLHYIGADGEEHRPVMIHRGVISTMERFT 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IEN+KG  P WL+P Q  V  +++   V+YA E+A  L+   + ++ D RNE + +K
Sbjct: 529 AILIENYKGAFPTWLAPHQVTVIPVSNEKHVDYAWEVAKKLRDRGVRVDVDERNEKMQFK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           IR    +KIP  +I GDKE  E ++ +RR+G   T+ + +
Sbjct: 589 IRASQTQKIPYQLIVGDKEMDENAVNVRRYGQKETETMPV 628


>gi|167042805|gb|ABZ07523.1| putative tRNA synthetase class II core domain (G, H, P, S and T)
           [uncultured marine microorganism HF4000_ANIW137I15]
          Length = 627

 Score =  526 bits (1356), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 261/605 (43%), Positives = 383/605 (63%), Gaps = 20/605 (3%)

Query: 24  SDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAE 83
           +D   +  +  +   +   +  ++ DL     +     IT +DP    V  HS AHIMAE
Sbjct: 8   TDTRAATRKMTSSGPLVWKVGDQLVDLVAKDDKAEAREITFDDPEGRQVYHHSTAHIMAE 67

Query: 84  AVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSH 143
           AVQ ++P  +V IGP IE+GFYYDFD+++PF+ D+L +IE +M+EI A + PF+++ +S 
Sbjct: 68  AVQDLFPGTKVTIGPPIENGFYYDFDRDEPFTPDDLERIETRMREIRAENRPFVREPVSK 127

Query: 144 EKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKV 203
           E+AR+LF+ + E YK+E+L+ IP  E V++YRQGEW DLCRGPHV STG ++   KL+ V
Sbjct: 128 EEARKLFQERDEPYKLELLDGIP-DETVSIYRQGEWLDLCRGPHVPSTGFIEAV-KLLSV 185

Query: 204 AGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-G 262
           AGAYWRGD    ML RIYGT++ TQ+ L ++L  LEE+ +RDHR L +E+ LF I E  G
Sbjct: 186 AGAYWRGDERNKMLQRIYGTSFPTQEALDEHLAHLEEARRRDHRVLGKELGLFLIHEQAG 245

Query: 263 SGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG+++W   G  + + +  +   + ++  YE +  P ++   L++ SGH+D Y+ NMF +
Sbjct: 246 SGLVYWLPHGAVLRKVIERFWEDEHVRRGYELVVIPHLVHSRLFRTSGHYDFYKENMFTL 305

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           +       D   +  KPMNCPGH+ ++ +  +SYR+LP+R AE G+VYRNE SG LHG++
Sbjct: 306 EV------DGEEYVAKPMNCPGHILIYQNERRSYRDLPIRYAEMGTVYRNERSGVLHGML 359

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR----PEKRVGS 437
           RVRGFTQDDAH+FCT EQ+  E L + ++ + +   FGFE+  ++LS R    PEK  GS
Sbjct: 360 RVRGFTQDDAHIFCTPEQLPGEILGVLDMTLFMLATFGFERFEIELSVRDPAHPEKYAGS 419

Query: 438 DALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ 497
           D  W  AE  +   LD  ++    R       GE  FYGPK +  + DA+GR WQ  TIQ
Sbjct: 420 DDEWKAAEASLVQALDE-RSLPYRRCE-----GEAVFYGPKIDVKIVDALGRGWQASTIQ 473

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIV 557
            DFNLP RF+  YV +  +   P M+HRA+ GS+ERF+G +IE+  G  PLWLSP+Q  V
Sbjct: 474 FDFNLPRRFDLKYVGADGDFHTPYMVHRALLGSLERFVGALIEHTAGAFPLWLSPVQVKV 533

Query: 558 TTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASER 617
             IT    ++A+ +A  LK   L ++ D RNE + YKIR+  +++ P +++ GD+E   +
Sbjct: 534 LPITERNHDHARRVAASLKESGLRVDVDDRNEKLGYKIRQGRLERTPYLLVIGDREQESQ 593

Query: 618 SIGIR 622
            + +R
Sbjct: 594 QVAVR 598


>gi|322372498|ref|ZP_08047034.1| threonine--tRNA ligase [Streptococcus sp. C150]
 gi|321277540|gb|EFX54609.1| threonine--tRNA ligase [Streptococcus sp. C150]
          Length = 648

 Score =  526 bits (1356), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 268/641 (41%), Positives = 409/641 (63%), Gaps = 25/641 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           I +TFPDG+++ F    T  D+A+SIS SLAKKA+A   NGK+ D +  + E GSIEI+T
Sbjct: 2   INITFPDGAVREFESGVTTFDIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGSIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQI 122
           P+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D +    S+++L +I
Sbjct: 62  PDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNQAGQISNEDLPRI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWFD 181
           E++M++I+  + P +++ ++ ++ARE+F  K + YK+E++E     E  +T+YRQGE+ D
Sbjct: 122 EEEMKKIVKENFPSIREEVTKDEAREIF--KNDPYKLELIEEHSEDEGGLTIYRQGEYVD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++  F L+ VAGAYWRG+S+  M+ RIYGTAW  +++L  YL  LEE+
Sbjct: 180 LCRGPHVPSTGRIQ-IFHLLNVAGAYWRGNSDNAMMQRIYGTAWFDKKDLKTYLKRLEEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+++ G G+ FW   G  I + L  Y+  +++   Y+ + TP +
Sbjct: 239 KERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVDKEVAAGYQHVYTPPI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHWD YR +MF        + D   F L+PMNCP H+ V+ H + SYRELP
Sbjct: 299 ASVELYKTSGHWDHYREDMFPPM----DMGDGEEFVLRPMNCPHHIEVYKHHVHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  + +D H F   EQ+ +E  KI  LII +Y+DF 
Sbjct: 355 IRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHTFVAPEQIEDEFKKILQLIIDVYEDFN 414

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R      K   +D +W++A+ ++K  +D +       +      GE AFY
Sbjct: 415 LTDYRFRLSYRDPADKHKYFDNDEMWENAQRMLKAAVDDMG------VEYYEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G++    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF 
Sbjct: 469 GPKLDIQVKTALGKEETLSTIQLDFLLPERFDLHYIGADGEEHRPVMIHRGVISTMERFT 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IEN+KG  P WL+P Q  +  +++   V+YA ++A  L+   +  E D RNE + +K
Sbjct: 529 AILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWKVAKKLRDRGVRAEVDERNEKMQFK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFG--STTTQKVS 633
           IR    +KIP  +I GDKE  + ++ +RR+G   T T+ VS
Sbjct: 589 IRASQTQKIPYQLIVGDKEMEDGTVNVRRYGQKQTHTETVS 629


>gi|332664427|ref|YP_004447215.1| threonyl-tRNA synthetase [Haliscomenobacter hydrossis DSM 1100]
 gi|332333241|gb|AEE50342.1| threonyl-tRNA synthetase [Haliscomenobacter hydrossis DSM 1100]
          Length = 645

 Score =  526 bits (1356), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 273/638 (42%), Positives = 396/638 (62%), Gaps = 18/638 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIEIITP 64
           I +TFPDG ++ +    T  +VA SIS  LA+K ++  +NG+V D + P+   S   +  
Sbjct: 2   INITFPDGKVREYEPGTTALEVARSISEGLAQKVLSAKVNGEVWDATRPITTDSTLTLLT 61

Query: 65  -EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
            +D        HS AH+MAEA+++++P ++   GP  E GFYYD D   +P S D+L +I
Sbjct: 62  WDDKDGKTTFWHSSAHLMAEALEALFPGIKFGTGPATEGGFYYDVDPGSKPLSLDDLPKI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E+KM E+  + + +++  +S E+A   F+ K + YK+E++E     E +TLY+QG + DL
Sbjct: 122 EEKMLELARQKNRYVRSDISKEEALRFFQEKGDEYKIELIEKRGPDEALTLYQQGNFVDL 181

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+  TG +K   KL  VAGAYW+GD  R  L RIYG ++  Q++L ++L  LEE+ 
Sbjct: 182 CRGPHIPDTGFIKAV-KLTNVAGAYWQGDDTRQQLQRIYGVSFPKQKDLQEHLVMLEEAR 240

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVL 300
           KRDHRKL +E++LF  +E  G+G+  W  KG  +   L++++R  + K  Y+ + TP + 
Sbjct: 241 KRDHRKLGQELELFMFSERVGAGLPIWLPKGNALRDRLMNFLRVEQEKRGYKLVTTPHIG 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            + L+  SGH+  Y  + F       T KD   F LKPMNCP H  ++ H   SYR+LP+
Sbjct: 301 RKELYVTSGHYAKYGKDSFQ---PIHTPKDGEEFLLKPMNCPHHCEIYAHRPHSYRDLPM 357

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AEFG+VYR E +G LHGL RVRGFTQDDAH+FCT+EQ+  E L + +L  ++    GF
Sbjct: 358 RIAEFGTVYRYEQTGELHGLSRVRGFTQDDAHIFCTEEQVKGEFLNVLDLTRTVLYKMGF 417

Query: 421 EKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           ++   ++S R    PEK +GSD  W +AEN +      I+ + +  + T + LGE AFYG
Sbjct: 418 KEFTAQISLRDPNTPEKYLGSDENWRNAENAI------IEATREVGLKTTMELGEAAFYG 471

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK +++++DAIGR WQ GTIQVD+NLP RF   YV + ++   PVMIHRA FGS+ERFI 
Sbjct: 472 PKLDFMVRDAIGRQWQLGTIQVDYNLPERFELEYVGADNKTHRPVMIHRAPFGSMERFIS 531

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           I+IEN  G  PLWL P Q  +  I+   V+Y +EI   L +H +    D RNETI  KIR
Sbjct: 532 ILIENTAGKFPLWLMPEQYALLPISEKFVDYCKEIEEKLATHDIRGYVDDRNETIGRKIR 591

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           +  +K+IP ++I G+KE     + +RR G      +SL
Sbjct: 592 DTELKRIPYMLIVGEKEMEATGVAVRRQGEGDKGSMSL 629


>gi|52081397|ref|YP_080188.1| threonyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52786773|ref|YP_092602.1| threonyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|319647305|ref|ZP_08001527.1| threonyl-tRNA synthetase 1 [Bacillus sp. BT1B_CT2]
 gi|52004608|gb|AAU24550.1| threonyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52349275|gb|AAU41909.1| ThrS [Bacillus licheniformis ATCC 14580]
 gi|317390652|gb|EFV71457.1| threonyl-tRNA synthetase 1 [Bacillus sp. BT1B_CT2]
          Length = 643

 Score =  526 bits (1355), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 267/646 (41%), Positives = 416/646 (64%), Gaps = 20/646 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSI 59
           M   +K+ FPDG++K F    T  D+A SIS  L KKA+A  +NGK  DL  P+ E G+I
Sbjct: 1   MSDMVKIKFPDGAVKEFAKATTTEDIAASISPGLKKKAIAGKLNGKEIDLRAPILEDGAI 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT     +L ++RHS AH+MA+A++ ++  V++ +GP+IE+GFYYD D E+  + ++L
Sbjct: 61  EIITEGSEEALEIMRHSTAHLMAQAIKRLYKNVKLGVGPVIENGFYYDVDLEEALTPEDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IEK+M++I+  + P +++ +S E+AR LF    +  K+E+L++IP  E V++Y QGE+
Sbjct: 121 PKIEKEMKKIVGENLPIVRKEVSREEARALFAEIGDDLKLELLDAIPEGETVSIYEQGEF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRG HV STG++K+ FKL+ +AGAYWRGDSN  ML RIYGTA+  + EL ++L  LE
Sbjct: 181 FDLCRGVHVPSTGKIKE-FKLLSLAGAYWRGDSNNKMLQRIYGTAFFKKAELEEHLRLLE 239

Query: 240 ESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTP 297
           E+++RDHRKL +E+ LF  ++  G G+  W  KG  I + +  Y+  +++   YE + TP
Sbjct: 240 EAKERDHRKLGKELKLFANSQKVGQGLPLWLPKGATIRRVIERYIVDKELALGYEHVYTP 299

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +  + L++ SGHWD Y+  MF     D+      T  L+PMNCP H+ ++ + + SYRE
Sbjct: 300 VLGSKDLYETSGHWDHYQDGMFPPMEMDN-----ETLVLRPMNCPHHMMIYKNDIHSYRE 354

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+ +E ++   LI  +Y+D
Sbjct: 355 LPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKDEFIRTVRLIQDVYED 414

Query: 418 FGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           FG E+   +LS R     EK    D +W+ A++++K  +D I +   +        GE A
Sbjct: 415 FGLEEYSFRLSYRDPEDTEKYYDDDEMWNKAQSMLKEAMDEIGHDYYE------AEGEAA 468

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  +K AIG++    T+Q+DF LP +F+  YV    +   PV+IHR V  ++ER
Sbjct: 469 FYGPKLDVQVKTAIGKEETLSTVQLDFLLPEKFDLTYVGEDGKPHRPVVIHRGVVSTMER 528

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETIN 592
           F+  +IE  KG LP WL+P+Q  V  ++ S  ++YA+++   L+   L +E D R+E I 
Sbjct: 529 FVAFLIEEHKGALPTWLAPVQFQVIPVSPSVHLDYAKKVQERLQREGLRVEVDTRDEKIG 588

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           YKIRE  ++KIP +++ GD+E    ++ +R++G   ++ V++ D I
Sbjct: 589 YKIREAQMQKIPYMLVVGDQEVENEAVNVRKYGEQKSETVAIADFI 634


>gi|160936998|ref|ZP_02084362.1| hypothetical protein CLOBOL_01887 [Clostridium bolteae ATCC
           BAA-613]
 gi|158440188|gb|EDP17935.1| hypothetical protein CLOBOL_01887 [Clostridium bolteae ATCC
           BAA-613]
          Length = 636

 Score =  526 bits (1355), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 255/574 (44%), Positives = 375/574 (65%), Gaps = 20/574 (3%)

Query: 55  REGSIEIITP-----EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD 109
           +E  ++II P     E    L  IRH+ +H++A+AV+ ++P+ ++AIGP I+DGFYYDFD
Sbjct: 49  KEIRMKIILPDGSVQEAEDELRAIRHTASHVLAQAVKRLYPDAKLAIGPAIDDGFYYDFD 108

Query: 110 KEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKE 169
           +E  F+ ++L ++E +M +I+  + P     L   +A    E K E YKVE++E +P +E
Sbjct: 109 REGGFTPEDLEKLEAEMAKIVKENLPVKPFVLPRAEAVRFMEEKGEPYKVELIEDLPEEE 168

Query: 170 NVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQ 229
            ++ Y+QGE+ DLC GPH+  T  VK F KL  +AGAYWRG     ML+RIYGTA+  + 
Sbjct: 169 TISFYQQGEFVDLCAGPHIMYTKGVKAF-KLTSIAGAYWRGSEKNKMLTRIYGTAFANKT 227

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIK 288
           +L  YL  +EE++KRDHRKL +E+ LF  AE+G G  F+  KG  +  TLI Y R    +
Sbjct: 228 DLESYLTMMEEAKKRDHRKLGKELGLFMFAEEGPGFPFFLPKGMTLKNTLIDYWREIHYR 287

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
           D Y+E++TP +L + LW+ SGHWD Y+ NM+       T+ D   +A+KPMNCPG + V+
Sbjct: 288 DGYQEVSTPIILSRKLWENSGHWDHYKDNMYT------TVIDEEDYAVKPMNCPGGMLVY 341

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
            +   SYR+LP+++ E G V+R+E SG LHGLMRVR FTQDDAH+F   +Q+ ++   + 
Sbjct: 342 KNQPHSYRDLPLKVGELGLVHRHEKSGQLHGLMRVRCFTQDDAHIFMRDDQIEDQIKGVT 401

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
            LI  +Y  FGFE   V+LSTRPE  +GSD  W+ A N   G+   +++   D I   V 
Sbjct: 402 KLINEVYTQFGFE-YFVELSTRPEDSMGSDEDWEMATN---GLRKALEDMGLDYI---VN 454

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
            G+GAFYGPK ++ L+D++GR WQCGTIQ+DF +P RF+  Y      K  P+MIHR  F
Sbjct: 455 EGDGAFYGPKIDFHLRDSLGRTWQCGTIQLDFQMPQRFDLEYTAEDGSKKRPIMIHRVCF 514

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRN 588
           GSIERFIGI+IE+F G  P+WL+P+Q  V  ++  +++YA  +   LK+  +  E D ++
Sbjct: 515 GSIERFIGILIEHFAGKFPVWLAPVQVKVIPVSEKSMDYATGVYEKLKAAGIRTELDHKD 574

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           E + YKIR+  ++K+P +++ G+KEA+E +I +R
Sbjct: 575 EKVGYKIRQAQLEKVPYMLVLGEKEAAEGAITVR 608


>gi|189485254|ref|YP_001956195.1| threonyl-tRNA synthetase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
 gi|170287213|dbj|BAG13734.1| threonyl-tRNA synthetase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
          Length = 598

 Score =  526 bits (1355), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 265/585 (45%), Positives = 379/585 (64%), Gaps = 16/585 (2%)

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           E  +SL ++RHS AHIMA AV  ++P  +VAIGP IEDGFYYDFD+EQ F+  +L +IE+
Sbjct: 22  EKQKSLDILRHSTAHIMAAAVMELFPGTKVAIGPSIEDGFYYDFDREQAFTPGDLIRIEE 81

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
           KM EII  D PF+  Y+   +A + F  K E YK EI   I   + V++YR G + DLCR
Sbjct: 82  KMAEIIKADYPFICSYVPKGEAVKEFREKGEKYKAEIASQI-EDDKVSMYRSGNFTDLCR 140

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPH+ STG++K +FKL+ +AGAYWRGDS+R  L RIYGTA+ T++++  YL  +EE+ KR
Sbjct: 141 GPHINSTGELK-YFKLLSIAGAYWRGDSSREQLQRIYGTAFLTKKDIDDYLTGIEEAHKR 199

Query: 245 DHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           DHRKL  ++DLF I E  G G++ WH KG  +   + +Y ++  +++ Y+ ++TP +  +
Sbjct: 200 DHRKLGEDLDLFSIDETVGGGLVLWHPKGALLKDIIENYWKKFHLENGYDLLSTPHIASE 259

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            L++ SGH  +Y  NM+A    +      + + +KPMNCP H+ ++   L SYRELPVR 
Sbjct: 260 ELFKVSGHLQTYSENMYASMEIEG-----KPYRIKPMNCPMHLMIYKTKLHSYRELPVRY 314

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AE G+VYR E SG LHGL+RVRGFTQDD H+    EQ+  E L + N+ ++  K FGF +
Sbjct: 315 AELGTVYRFEKSGVLHGLLRVRGFTQDDGHIIVAPEQLEEEMLGVFNMAVNCLKTFGFNE 374

Query: 423 IMVKLSTRPEKR-VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
             +  +TRPEK+ VG    W+ A+N ++  L   K      I+ G     GAFYGPK + 
Sbjct: 375 YKIYFATRPEKKYVGEIEYWEKAQNSIENALK--KTGCVYEIDEG----GGAFYGPKIDI 428

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KD IGR WQC T+Q DFNLP RF+ FYVNS  +K  P MIHRA+ GS+ERFIG+++E+
Sbjct: 429 KIKDVIGRLWQCSTLQFDFNLPERFDIFYVNSSGKKARPYMIHRALLGSLERFIGVLLEH 488

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G LPLWLSPIQ  V  I      + + ++  LK +++ +  D RNE I  KIRE++++
Sbjct: 489 YAGALPLWLSPIQVAVANINEEQRGFCEGLSQELKKNNIRVIFDGRNEKIGRKIRENAMQ 548

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           KIP I + G+KE    ++ +R  G+     +S+ + I  + +ES+
Sbjct: 549 KIPYIAVIGNKEKDACAVAVRARGNRDLGVMSVDNFISFVKEESV 593


>gi|261208968|ref|ZP_05923373.1| threonyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289565220|ref|ZP_06445672.1| threonyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|294615018|ref|ZP_06694907.1| threonyl-tRNA synthetase [Enterococcus faecium E1636]
 gi|260077007|gb|EEW64729.1| threonyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289163041|gb|EFD10889.1| threonyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|291592149|gb|EFF23769.1| threonyl-tRNA synthetase [Enterococcus faecium E1636]
          Length = 647

 Score =  526 bits (1355), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 266/635 (41%), Positives = 404/635 (63%), Gaps = 23/635 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+TFPDG++K F    T   +AESIS+SLAKKA+A  +NGK+ DL+ P+ E  SIEIIT
Sbjct: 2   IKITFPDGAVKEFESGTTTLAIAESISKSLAKKALAGKVNGKLVDLTRPIEEDASIEIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQI 122
           P+   +L ++RHS AH+MA+A++ ++P +   +GP I+ GFYYD D  Q   ++++L  I
Sbjct: 62  PDHEDALGLVRHSAAHLMAQAMRRLYPNIHFGVGPAIDSGFYYDTDNGQNQVTAEDLPAI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M +I+  + P  ++ LS ++A E+F S  + YKVE++  +P +E +T Y+QGE+ DL
Sbjct: 122 EAEMMKIVKENLPIERRVLSKQEALEIFAS--DPYKVELISELPEEEVITAYQQGEFIDL 179

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG+++  FKL+ VAGAYWRG+SN  M+ R+YGTA+  ++ L +Y+   EE++
Sbjct: 180 CRGPHVPSTGRIQ-VFKLLSVAGAYWRGNSNNQMMQRVYGTAFFDKKALKEYIRLREEAK 238

Query: 243 KRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVL 300
           +RDHRKL +E+DLF ++ E GSG+ FW  KG  I +T+  Y+  +++   Y+ + TP + 
Sbjct: 239 ERDHRKLGKELDLFMVSPEVGSGLPFWLPKGATIRRTIERYIVDKEVSLGYQHVYTPIMG 298

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D  L++ SGHWD Y+ +MF        + D     L+PMNCP H+ V+ + + SYRELP+
Sbjct: 299 DVELYKTSGHWDHYQEDMFPPM----DMGDGEMLVLRPMNCPHHMMVYKNTIHSYRELPI 354

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  +   L++++Y DF  
Sbjct: 355 RIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVAVYADFNI 414

Query: 421 EKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
                +LS R     +K    DA+W+ A+ ++K  +D ++      ++     GE AFYG
Sbjct: 415 TDYRFRLSYRDPNNTDKYFDDDAMWEKAQAMLKAAMDELE------LDYFEAEGEAAFYG 468

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH-PVMIHRAVFGSIERFI 535
           PK +  +K A+G +    TIQ+DF LP RF+  YV    E  H PV+IHR +  ++ERF+
Sbjct: 469 PKLDVQVKTALGTEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTMERFV 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
             + E +KG  P WL+PIQA +  ++  A  +YA EI   L+   L +E D RNE + YK
Sbjct: 529 AYLTEVYKGAFPTWLAPIQATIIPVSVDAHGDYAYEIKERLQMKGLRVEVDDRNEKMGYK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           IR    +KIP  ++ GDKE  + ++ +RR+GS  T
Sbjct: 589 IRASQTQKIPYQLVVGDKELEDATVNVRRYGSKET 623


>gi|15924673|ref|NP_372207.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50]
 gi|15927261|ref|NP_374794.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus N315]
 gi|156980000|ref|YP_001442259.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
 gi|255006467|ref|ZP_05145068.2| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Mu50-omega]
 gi|54039693|sp|P67585|SYT_STAAN RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|54042050|sp|P67584|SYT_STAAM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|166225504|sp|A7X3A6|SYT_STAA1 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|13701479|dbj|BAB42773.1| threonyl-tRNA synthetase 1 [Staphylococcus aureus subsp. aureus
           N315]
 gi|14247455|dbj|BAB57845.1| threonyl-tRNA synthetase 1 [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|156722135|dbj|BAF78552.1| threonyl-tRNA synthetase 1 [Staphylococcus aureus subsp. aureus
           Mu3]
          Length = 645

 Score =  526 bits (1355), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 267/636 (41%), Positives = 402/636 (63%), Gaps = 21/636 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           I + FPDG+ K F    T  D+A+SIS  L KKAVA   NG++ DL+ P+  +GSI I+T
Sbjct: 4   INIQFPDGNKKAFDKGTTTEDIAQSISPGLRKKAVAGKFNGQLVDLTKPLETDGSIGIVT 63

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P    +L V+RHS AH+MA A++ ++  V+  +GP+IE GFYYDFD +Q  SSD+  QIE
Sbjct: 64  PGSEEALEVLRHSTAHLMAHAIKRLYGNVKFGVGPVIEGGFYYDFDIDQNISSDDFEQIE 123

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K M++I+  +    ++ +S ++A+ELF +  + YK+E++++IP  ENVTLY QG++ DLC
Sbjct: 124 KTMKQIVNENMKIERKVVSRDEAKELFSN--DEYKLELIDAIPEDENVTLYSQGDFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RG HV ST ++K+F KL+  AGAYWRGDSN  ML RIYGTA+  ++EL  +L  LEE ++
Sbjct: 182 RGVHVPSTAKIKEF-KLLSTAGAYWRGDSNNKMLQRIYGTAFFDKKELKAHLQMLEERKE 240

Query: 244 RDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLD 301
           RDHRK+ +E++LF  ++  G+G+  W   G  I + +  Y+  +++   Y+ + TP + +
Sbjct: 241 RDHRKIGKELELFTNSQLVGAGLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLAN 300

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             L++ SGHWD Y+ +MF     D+T     +  L+PMNCP H+ ++ +   SYRELP+R
Sbjct: 301 VDLYKTSGHWDHYQEDMFPPMQLDET----ESMVLRPMNCPHHMMIYANKPHSYRELPIR 356

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AE G+++R E SG++ GL RVRG T +D+H+F   +Q+  E  ++ N+II +YKDFGFE
Sbjct: 357 IAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVNMIIDVYKDFGFE 416

Query: 422 KIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
               +LS R     EK    D +W+ AEN++K   D +  S ++ I      GE AFYGP
Sbjct: 417 DYSFRLSYRDPEDKEKYFDDDDMWNKAENMLKEAADELGLSYEEAI------GEAAFYGP 470

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  +K A+G++    T Q+DF LP RF+  Y+    E   PV+IHR V  ++ERF+  
Sbjct: 471 KLDVQVKTAMGKEETLSTAQLDFLLPERFDLTYIGQDGEHHRPVVIHRGVVSTMERFVAF 530

Query: 538 MIENFKGNLPLWLSPIQA-IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           + E  KG  P WL+P Q  I+        +YA+++ + LKS  + +  D RNE + YKIR
Sbjct: 531 LTEETKGAFPTWLAPKQVQIIPVNVDLHYDYARQLQDELKSQGVRVSIDDRNEKMGYKIR 590

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
           E  ++KIP  I+ GDKE     + +R++GS   + V
Sbjct: 591 EAQMQKIPYQIVVGDKEVENNQVNVRQYGSQDQETV 626


>gi|69245748|ref|ZP_00603614.1| Threonyl-tRNA synthetase, class IIa [Enterococcus faecium DO]
 gi|257880251|ref|ZP_05659904.1| threonyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257883051|ref|ZP_05662704.1| threonyl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|257891365|ref|ZP_05671018.1| threonyl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|257893638|ref|ZP_05673291.1| threonyl-tRNA synthetase [Enterococcus faecium 1,231,408]
 gi|258614441|ref|ZP_05712211.1| threonyl-tRNA synthetase [Enterococcus faecium DO]
 gi|260560451|ref|ZP_05832625.1| threonyl-tRNA synthetase [Enterococcus faecium C68]
 gi|293563269|ref|ZP_06677719.1| threonyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|294621403|ref|ZP_06700575.1| threonyl-tRNA synthetase [Enterococcus faecium U0317]
 gi|314939207|ref|ZP_07846461.1| threonyl-tRNA synthetase [Enterococcus faecium TX0133a04]
 gi|314942550|ref|ZP_07849386.1| threonyl-tRNA synthetase [Enterococcus faecium TX0133C]
 gi|314948402|ref|ZP_07851791.1| threonyl-tRNA synthetase [Enterococcus faecium TX0082]
 gi|314951256|ref|ZP_07854311.1| threonyl-tRNA synthetase [Enterococcus faecium TX0133A]
 gi|314991679|ref|ZP_07857149.1| threonyl-tRNA synthetase [Enterococcus faecium TX0133B]
 gi|314996805|ref|ZP_07861818.1| threonyl-tRNA synthetase [Enterococcus faecium TX0133a01]
 gi|68195641|gb|EAN10081.1| Threonyl-tRNA synthetase, class IIa [Enterococcus faecium DO]
 gi|257814479|gb|EEV43237.1| threonyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257818709|gb|EEV46037.1| threonyl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|257827725|gb|EEV54351.1| threonyl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|257830017|gb|EEV56624.1| threonyl-tRNA synthetase [Enterococcus faecium 1,231,408]
 gi|260073453|gb|EEW61781.1| threonyl-tRNA synthetase [Enterococcus faecium C68]
 gi|291599050|gb|EFF30095.1| threonyl-tRNA synthetase [Enterococcus faecium U0317]
 gi|291604721|gb|EFF34205.1| threonyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|313589100|gb|EFR67945.1| threonyl-tRNA synthetase [Enterococcus faecium TX0133a01]
 gi|313593770|gb|EFR72615.1| threonyl-tRNA synthetase [Enterococcus faecium TX0133B]
 gi|313596608|gb|EFR75453.1| threonyl-tRNA synthetase [Enterococcus faecium TX0133A]
 gi|313598686|gb|EFR77531.1| threonyl-tRNA synthetase [Enterococcus faecium TX0133C]
 gi|313641458|gb|EFS06038.1| threonyl-tRNA synthetase [Enterococcus faecium TX0133a04]
 gi|313645194|gb|EFS09774.1| threonyl-tRNA synthetase [Enterococcus faecium TX0082]
          Length = 646

 Score =  526 bits (1354), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 266/635 (41%), Positives = 404/635 (63%), Gaps = 23/635 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+TFPDG++K F    T   +AESIS+SLAKKA+A  +NGK+ DL+ P+ E  SIEIIT
Sbjct: 2   IKITFPDGAVKEFESGTTTLAIAESISKSLAKKALAGKVNGKLVDLTRPIEEDASIEIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQI 122
           P+   +L ++RHS AH+MA+A++ ++P +   +GP I+ GFYYD D  Q   ++++L  I
Sbjct: 62  PDHEDALGLVRHSAAHLMAQAMRRLYPNIHFGVGPAIDSGFYYDTDNGQNQVTAEDLPAI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M +I+  + P  ++ LS ++A E+F S  + YKVE++  +P +E +T Y+QGE+ DL
Sbjct: 122 EAEMMKIVKENLPIERRVLSKQEALEIFAS--DPYKVELISELPEEEVITAYQQGEFIDL 179

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG+++  FKL+ VAGAYWRG+SN  M+ R+YGTA+  ++ L +Y+   EE++
Sbjct: 180 CRGPHVPSTGRIQ-VFKLLSVAGAYWRGNSNNQMMQRVYGTAFFDKKALKEYIRLREEAK 238

Query: 243 KRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVL 300
           +RDHRKL +E+DLF ++ E GSG+ FW  KG  I +T+  Y+  +++   Y+ + TP + 
Sbjct: 239 ERDHRKLGKELDLFMVSPEVGSGLPFWLPKGATIRRTIERYIVDKEVSLGYQHVYTPIMG 298

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D  L++ SGHWD Y+ +MF        + D     L+PMNCP H+ V+ + + SYRELP+
Sbjct: 299 DVELYKTSGHWDHYQEDMFPPM----DMGDGEMLVLRPMNCPHHMMVYKNTIHSYRELPI 354

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  +   L++++Y DF  
Sbjct: 355 RIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVAVYADFNI 414

Query: 421 EKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
                +LS R     +K    DA+W+ A+ ++K  +D ++      ++     GE AFYG
Sbjct: 415 TDYRFRLSYRDPNNTDKYFDDDAMWEKAQAMLKAAMDELE------LDYFEAEGEAAFYG 468

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH-PVMIHRAVFGSIERFI 535
           PK +  +K A+G +    TIQ+DF LP RF+  YV    E  H PV+IHR +  ++ERF+
Sbjct: 469 PKLDVQVKTALGTEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTMERFV 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
             + E +KG  P WL+PIQA +  ++  A  +YA EI   L+   L +E D RNE + YK
Sbjct: 529 AYLTEVYKGAFPTWLAPIQATIIPVSVDAHGDYAYEIKERLQMKGLRVEVDDRNEKMGYK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           IR    +KIP  ++ GDKE  + ++ +RR+GS  T
Sbjct: 589 IRASQTQKIPYQLVVGDKELEDATVNVRRYGSKET 623


>gi|222152709|ref|YP_002561885.1| threonyl-tRNA synthetase [Streptococcus uberis 0140J]
 gi|254783540|sp|B9DU13|SYT_STRU0 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|222113521|emb|CAR41303.1| threonyl-tRNA synthetase [Streptococcus uberis 0140J]
          Length = 648

 Score =  526 bits (1354), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 268/640 (41%), Positives = 404/640 (63%), Gaps = 23/640 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I +TFPDG+++ F    T  D+A+SIS SLAKKA+A   NG++ D + P+  +GSIEI+T
Sbjct: 2   INITFPDGAVREFESGITTFDIAQSISNSLAKKALAGKFNGQLIDTNRPIDTDGSIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQI 122
           P+   +  V+RHS AH+ A+A + ++P++ + +GP I +GFYYD D      S+++L +I
Sbjct: 62  PDHEDAFGVLRHSAAHLFAQAAKRLFPDIHLGVGPAIAEGFYYDTDNSSGQISNEDLPRI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFD 181
           E +MQ+I+  + P +++ ++ E+A E+F  K + YK+E++ E       +T+YRQGE+ D
Sbjct: 122 EAEMQKIVKENYPCIREEVTKEEALEIF--KDDPYKIELINEHSDDAAGLTIYRQGEFVD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++  F L+ VAGAYWRG+S+  M+ R+YGTAW  +++L  YL  LEE+
Sbjct: 180 LCRGPHVPSTGRIQ-VFHLLNVAGAYWRGNSDNAMMQRVYGTAWFDKKDLKAYLTRLEEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+++ G G+ FW   G  I +TL  Y+  K +   Y+ + TP +
Sbjct: 239 KERDHRKLGKELDLFMISQEVGQGLPFWLPDGATIRRTLERYITDKELASGYQHVYTPPL 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHW+ Y+ +MF        + D   F L+PMNCP H+ V+ + + SYRELP
Sbjct: 299 ASVELYKTSGHWEHYQEDMFPTM----DMGDGEEFVLRPMNCPHHIQVYKNHVHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  T +D H+F T EQ+  E  +   LII +Y+DF 
Sbjct: 355 IRIAELGMMHRYEKSGALSGLQRVREMTLNDGHLFVTPEQIQEEFQRALQLIIDVYEDFN 414

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R     EK   +D +W++A++++K  LD +       +      GE AFY
Sbjct: 415 LTDYRFRLSYRDPKDTEKYYDNDEMWENAQSMLKAALDEMG------VEYFEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G +    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF 
Sbjct: 469 GPKLDIQVKTALGNEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMIHRGVISTMERFT 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IE +KG  P WL+P Q  V  I++ A ++YA E+A  L+   +  + D RNE + YK
Sbjct: 529 AILIETYKGAFPTWLAPHQVTVIPISNEAHIDYAWEVAKALRDRGIRADVDDRNEKMQYK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           IR     KIP  +I GDKE  ++S+ +RR+GS  T   SL
Sbjct: 589 IRASQTSKIPYQLIVGDKEMEDKSVNVRRYGSKATHTESL 628


>gi|322517198|ref|ZP_08070081.1| threonine--tRNA ligase [Streptococcus vestibularis ATCC 49124]
 gi|322124257|gb|EFX95773.1| threonine--tRNA ligase [Streptococcus vestibularis ATCC 49124]
          Length = 648

 Score =  526 bits (1354), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 268/641 (41%), Positives = 409/641 (63%), Gaps = 25/641 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           I +TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  + E GSIEI+T
Sbjct: 2   INITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTARAITEDGSIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQI 122
           P+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D +    S+++L +I
Sbjct: 62  PDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNQAGQISNEDLPRI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWFD 181
           E++M++I+  + P +++ ++ ++ARE+F  K + YK+E++E     E  +T+YRQGE+ D
Sbjct: 122 EEEMKKIVKENFPSIREEVTKDEAREIF--KNDPYKLELIEEHSEDEGGLTIYRQGEYVD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++  F L+ VAGAYWRG+S+  M+ RIYGTAW  +++L  YL  LEE+
Sbjct: 180 LCRGPHVPSTGRIQ-VFHLLNVAGAYWRGNSDNAMMQRIYGTAWFDKKDLKAYLKRLEEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+++ G G+ FW   G  I + L  Y+  +++   Y+ + TP +
Sbjct: 239 KERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVDKEVAAGYQHVYTPPI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHWD YR +MF        + D   F L+PMNCP H+ V+ H + SYRELP
Sbjct: 299 ASVELYKTSGHWDHYREDMFPPM----DMGDGEEFVLRPMNCPHHIEVYKHHVHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  + +D H F   EQ+ +E  KI  LII +Y+DF 
Sbjct: 355 IRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHTFVAPEQIEDEFKKILQLIIDVYEDFN 414

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R      K   +D +W++A+ ++K  +D +       +      GE AFY
Sbjct: 415 LTDYRFRLSYRDPADKHKYFDNDEMWENAQRMLKAAVDDMG------VEYYEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G++    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF 
Sbjct: 469 GPKLDIQVKTALGKEETLSTIQLDFLLPERFDLHYIGADGEEHRPVMIHRGVISTMERFT 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IEN+KG  P WL+P Q  +  +++   V+YA E+A  L+   +  E D RNE + +K
Sbjct: 529 AILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAKELRDRGVRAEVDERNEKMQFK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFG--STTTQKVS 633
           IR    +KIP  +I GDKE  + ++ +RR+G   T T+ VS
Sbjct: 589 IRASQTQKIPYQLIVGDKEMEDGTVNVRRYGQKQTHTETVS 629


>gi|293556705|ref|ZP_06675269.1| threonyl-tRNA synthetase [Enterococcus faecium E1039]
 gi|291601167|gb|EFF31455.1| threonyl-tRNA synthetase [Enterococcus faecium E1039]
          Length = 646

 Score =  526 bits (1354), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 266/635 (41%), Positives = 404/635 (63%), Gaps = 23/635 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+TFPDG++K F    T   +AESIS+SLAKKA+A  +NGK+ DL+ P+ E  SIEIIT
Sbjct: 2   IKITFPDGAVKEFESGTTTLAIAESISKSLAKKALAGKVNGKLVDLTRPIEENASIEIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQI 122
           P+   +L ++RHS AH+MA+A++ ++P +   +GP I+ GFYYD D  Q   ++++L  I
Sbjct: 62  PDHEDALGLVRHSAAHLMAQAMRRLYPNIHFGVGPAIDSGFYYDTDNGQNQVTAEDLPAI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M +I+  + P  ++ LS ++A E+F S  + YKVE++  +P +E +T Y+QGE+ DL
Sbjct: 122 EAEMMKIVKENLPIERRVLSKQEALEIFAS--DPYKVELISELPEEEVITAYQQGEFIDL 179

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG+++  FKL+ VAGAYWRG+SN  M+ R+YGTA+  ++ L +Y+   EE++
Sbjct: 180 CRGPHVPSTGRIQ-VFKLLSVAGAYWRGNSNNQMMQRVYGTAFFDKKALKEYIRLREEAK 238

Query: 243 KRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVL 300
           +RDHRKL +E+DLF ++ E GSG+ FW  KG  I +T+  Y+  +++   Y+ + TP + 
Sbjct: 239 ERDHRKLGKELDLFMVSPEVGSGLPFWLPKGATIRRTIERYIVDKEVSLGYQHVYTPIMG 298

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D  L++ SGHWD Y+ +MF        + D     L+PMNCP H+ V+ + + SYRELP+
Sbjct: 299 DVELYKTSGHWDHYQEDMFPPM----DMGDGEMLVLRPMNCPHHMMVYKNTIHSYRELPI 354

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  +   L++++Y DF  
Sbjct: 355 RIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVAVYADFNI 414

Query: 421 EKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
                +LS R     +K    DA+W+ A+ ++K  +D ++      ++     GE AFYG
Sbjct: 415 TDYRFRLSYRDPNNTDKYFDDDAMWEKAQAMLKAAMDELE------LDYFEAEGEAAFYG 468

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH-PVMIHRAVFGSIERFI 535
           PK +  +K A+G +    TIQ+DF LP RF+  YV    E  H PV+IHR +  ++ERF+
Sbjct: 469 PKLDVQVKTALGTEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTMERFV 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
             + E +KG  P WL+PIQA +  ++  A  +YA EI   L+   L +E D RNE + YK
Sbjct: 529 AYLTEVYKGAFPTWLAPIQATIIPVSVDAHGDYAYEIKERLQMKGLRVEVDDRNEKMGYK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           IR    +KIP  ++ GDKE  + ++ +RR+GS  T
Sbjct: 589 IRASQTQKIPYQLVVGDKELEDATVNVRRYGSKET 623


>gi|293569265|ref|ZP_06680563.1| threonyl-tRNA synthetase [Enterococcus faecium E1071]
 gi|291587971|gb|EFF19821.1| threonyl-tRNA synthetase [Enterococcus faecium E1071]
          Length = 646

 Score =  526 bits (1354), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 266/635 (41%), Positives = 404/635 (63%), Gaps = 23/635 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+TFPDG++K F    T   +AESIS+SLAKKA+A  +NGK+ DL+ P+ E  SIEIIT
Sbjct: 2   IKITFPDGAVKEFESGTTTLAIAESISKSLAKKALAGKVNGKLVDLTRPIEEDASIEIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQI 122
           P+   +L ++RHS AH+MA+A++ ++P +   +GP I+ GFYYD D  Q   ++++L  I
Sbjct: 62  PDHEDALGLVRHSAAHLMAQAMRRLYPNIHFGVGPAIDSGFYYDTDNGQNQVTAEDLPAI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M +I+  + P  ++ LS ++A E+F S  + YKVE++  +P +E +T Y+QGE+ DL
Sbjct: 122 EAEMMKIVKENLPIERRVLSKQEALEIFAS--DPYKVELINELPEEEVITAYQQGEFIDL 179

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG+++  FKL+ VAGAYWRG+SN  M+ R+YGTA+  ++ L +Y+   EE++
Sbjct: 180 CRGPHVPSTGRIQ-VFKLLSVAGAYWRGNSNNQMMQRVYGTAFFDKKALKEYIRLREEAK 238

Query: 243 KRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVL 300
           +RDHRKL +E+DLF ++ E GSG+ FW  KG  I +T+  Y+  +++   Y+ + TP + 
Sbjct: 239 ERDHRKLGKELDLFMVSPEVGSGLPFWLPKGATIRRTIERYIVDKEVSLGYQHVYTPIMG 298

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D  L++ SGHWD Y+ +MF        + D     L+PMNCP H+ V+ + + SYRELP+
Sbjct: 299 DVELYKTSGHWDHYQEDMFPPM----DMGDGEMLVLRPMNCPHHMMVYKNTIHSYRELPI 354

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  +   L++++Y DF  
Sbjct: 355 RIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVAVYADFNI 414

Query: 421 EKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
                +LS R     +K    DA+W+ A+ ++K  +D ++      ++     GE AFYG
Sbjct: 415 TDYRFRLSYRDPNNTDKYFDDDAMWEKAQAMLKAAMDELE------LDYFEAEGEAAFYG 468

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH-PVMIHRAVFGSIERFI 535
           PK +  +K A+G +    TIQ+DF LP RF+  YV    E  H PV+IHR +  ++ERF+
Sbjct: 469 PKLDVQVKTALGTEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTMERFV 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
             + E +KG  P WL+PIQA +  ++  A  +YA EI   L+   L +E D RNE + YK
Sbjct: 529 AYLTEVYKGAFPTWLAPIQATIIPVSVDAHGDYAYEIKERLQMKGLRVEVDDRNEKMGYK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           IR    +KIP  ++ GDKE  + ++ +RR+GS  T
Sbjct: 589 IRASQTQKIPYQLVVGDKELEDATVNVRRYGSKET 623


>gi|322385772|ref|ZP_08059416.1| threonine--tRNA ligase [Streptococcus cristatus ATCC 51100]
 gi|321270510|gb|EFX53426.1| threonine--tRNA ligase [Streptococcus cristatus ATCC 51100]
          Length = 649

 Score =  526 bits (1354), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 264/640 (41%), Positives = 409/640 (63%), Gaps = 23/640 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  + E GSIEI+T
Sbjct: 2   IKITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGSIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQI 122
           P+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D +    S+++L +I
Sbjct: 62  PDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNQAGQISNEDLPRI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWFD 181
           E++M++I+  + P +++ ++ ++ARE+F  K + YK+E++E     E  +T+Y QGE+ D
Sbjct: 122 EEEMKKIVKENFPSIREEVTKDEAREIF--KNDPYKLELIEEHSEDEGGLTIYCQGEYVD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++  F L+ VAGAYWRG+S+  M+ RIYGTAW  +++L  YL   EE+
Sbjct: 180 LCRGPHVPSTGRIQ-IFHLLHVAGAYWRGNSDNAMMQRIYGTAWFDKKDLKNYLQMREEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+++ G G+ FW   G  I + L  Y+  +++   Y+ + TP +
Sbjct: 239 KERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVDKELASGYQHVYTPPL 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHWD Y+ +MF        + D   F L+PMNCP H+ V+ H + SYRELP
Sbjct: 299 ASVELYKTSGHWDHYQEDMFPTM----DMGDGEEFVLRPMNCPHHIQVYKHHVHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y+DF 
Sbjct: 355 IRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYEDFN 414

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
             +   +LS R      K   +D +W++A+ +++  LD +       ++     GE AFY
Sbjct: 415 LTEYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G++    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF 
Sbjct: 469 GPKLDIQVKTALGKEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMIHRGVISTMERFT 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IEN+KG  P WL+P Q  +  +++   V+YA E+A  L+   +  + D RNE + +K
Sbjct: 529 AILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAKKLRDRGVRADVDERNEKMQFK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           IR     KIP  +I GDKE  + ++ +RR+G   TQ VS+
Sbjct: 589 IRASQTSKIPYQLIVGDKEMEDGTVNVRRYGQKETQTVSV 628


>gi|320451414|ref|YP_004203510.1| threonyl-tRNA synthetase [Thermus scotoductus SA-01]
 gi|320151583|gb|ADW22961.1| threonyl-tRNA synthetase [Thermus scotoductus SA-01]
          Length = 659

 Score =  526 bits (1354), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 269/632 (42%), Positives = 398/632 (62%), Gaps = 25/632 (3%)

Query: 9   FPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPEDP 67
            PDG        AT  DVA +I   LAK AV   +NG+V DL  P+  G+ + I+T +DP
Sbjct: 5   LPDGKALEVEEGATAWDVARAIGPGLAKAAVGALVNGEVYDLLKPLPPGAQVRILTEKDP 64

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPE-------VQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
               + RH+ AH++A+AV+  + E       V++ +GP+IE GFYYD D  +P S ++L 
Sbjct: 65  EYQLLFRHTLAHVLAQAVKEFFAEKGYDPESVKLGVGPVIEKGFYYDIDAPEPISDEDLP 124

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE-- 178
            IE+KM+ IIA+D P  +  L  E A   ++ K + YK E++  +P  E ++ Y+QG+  
Sbjct: 125 AIEEKMRAIIAKDLPLRRYVLPREVALSRYQGK-DPYKTELILDLPEDEEISFYQQGDEA 183

Query: 179 --WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
             + DLCRGPHV STG++   FKL  VAGAYWRGD  RPML R+YG A+ T +EL +YL+
Sbjct: 184 YGFTDLCRGPHVPSTGRIPPHFKLTHVAGAYWRGDEKRPMLQRVYGVAFRTAEELKEYLW 243

Query: 237 FLEESEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEI 294
            LEE++KRDHR+L RE++LF I    G G++ W  KG  I + L+++MR  +I+  Y+ +
Sbjct: 244 QLEEAKKRDHRRLGRELELFLIDPMVGKGLVLWLPKGNVIREELMAFMREEQIRRGYQLV 303

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
            TP +    L++ SGH+  Y  + F      +  ++   + LKPMNCP H+ ++    +S
Sbjct: 304 TTPHIGSLELYRTSGHYPYYAESQFPPISFKERGEE-EEYLLKPMNCPHHIRIYAFKKRS 362

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YRELP+RLAEFG+VYR E +G L GL RVRGFTQDDAH+FCT EQ+  E L + +L++ +
Sbjct: 363 YRELPLRLAEFGTVYRYEKAGELLGLTRVRGFTQDDAHLFCTPEQVKEEFLGVLDLVLKV 422

Query: 415 YKDFGFEKIMVKLSTR---PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
               G +    ++ TR    +K VG +A W  AE  ++      + + +  ++  V  G+
Sbjct: 423 LSTLGLKDYRARIGTRDPKSDKYVGDEAKWSLAERQIE------EAALEAGLHYTVEEGD 476

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
            AFYGPK ++++KDA+GR+WQ GTIQVD+NLP RF   YV     +  PVMIHRA FGS+
Sbjct: 477 AAFYGPKLDFVVKDALGREWQLGTIQVDYNLPERFGLTYVGPDGAEHRPVMIHRAPFGSL 536

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           ERFIGI+IE+F G+ PLWL+P+Q +V  ++    +YA+E+   LK   L  E D R E +
Sbjct: 537 ERFIGILIEHFAGDFPLWLAPVQVVVVPVSEKQEDYAKEVVFKLKEAGLRAEADLRPERM 596

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRR 623
             +IR+  ++K+P +++ GD+E +E ++ +RR
Sbjct: 597 QARIRDAEVQKVPYVLVVGDREKAEGTVSVRR 628


>gi|303325499|ref|ZP_07355942.1| threonine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
 gi|302863415|gb|EFL86346.1| threonine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
          Length = 648

 Score =  526 bits (1354), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 273/650 (42%), Positives = 397/650 (61%), Gaps = 30/650 (4%)

Query: 11  DGSIKNFPVHATGSDVAESISRSLAKK------AVAVAINGK--VCDLSDPVREGSIEI- 61
           +G + + P    G++VA ++ ++L+ K      A    ++G+  + DLS P+ EG  E+ 
Sbjct: 6   EGQMVDVP---AGAEVAAALQKALSGKKFKAVVAAGAVVDGRSELLDLSAPLPEGCGELT 62

Query: 62  -ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            +  + P  L +IRHS AH+MA AV+ ++P  +V IGP I++GFYYDFD E+PFSS++  
Sbjct: 63  PVYADSPEGLQLIRHSTAHVMAAAVKRLFPTARVTIGPSIDNGFYYDFDVERPFSSEDFP 122

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IE +MQ+I A   PF ++ LS   A   F++  E YKVE++E I A + V+LY  G++ 
Sbjct: 123 AIEAEMQKIAAAREPFSREALSKADAVARFKAMGETYKVELIEGIEA-DTVSLYTCGDFT 181

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV  TG   K  KLM VAGAYWRGD   PMLSRIYGTA+  ++ L  YL  LEE
Sbjct: 182 DLCRGPHVPHTG-FAKASKLMSVAGAYWRGDEKNPMLSRIYGTAFADEKALAAYLKQLEE 240

Query: 241 SEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQ 298
           +++RDHRKL RE+ LF   ED   G++FW  KG  +   L  + R++ +K  Y+ +  PQ
Sbjct: 241 AKRRDHRKLGRELSLFAFQEDVAPGMVFWLPKGMLVRAILEDFWRKEHLKRGYDMVQGPQ 300

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L    WQ+SGH+D YR NM+  +  DD       + +KPMNC  H+ ++ + L+SYR+L
Sbjct: 301 LLRVETWQRSGHYDHYRENMYFTRIEDDA------YGIKPMNCIAHMLIYKNELRSYRDL 354

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P R  E G V+R+E SG LHGL+RVR FTQDDAH+ C  EQ+  E L + +LI  +   F
Sbjct: 355 PQRYFELGVVHRHEKSGVLHGLLRVRQFTQDDAHILCAPEQLEGEILGVIHLIRDLMHLF 414

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+   V +STRPE  +G+D  W+ A N +      I+   +  +   +  G+GAFYGPK
Sbjct: 415 GFQ-YKVAVSTRPESSIGTDEAWELATNAL------IQAVEKAGLPYEINAGDGAFYGPK 467

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +  L D IGR+WQC TIQVDF LP RF+  YV    E+  PVM+HRA+ GS+ERFIG++
Sbjct: 468 IDVRLLDCIGREWQCSTIQVDFTLPERFDLTYVGQDGERHRPVMVHRAIMGSLERFIGVL 527

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE + G LP WL+P QA + T+T +     + +   L++  + +  D RNE + +K+RE 
Sbjct: 528 IEQYAGALPAWLAPEQARLLTVTEAGDATVERMRGELQALGIRVTADTRNEKLGFKVREA 587

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
            + K+P I++ G+KE     + +R          S+ D   ++  ++  P
Sbjct: 588 QVAKVPYILVVGEKEVQADGVNVRLRSGENLGLKSIADVAALIRADAEEP 637


>gi|311747151|ref|ZP_07720936.1| threonine--tRNA ligase [Algoriphagus sp. PR1]
 gi|126578860|gb|EAZ83024.1| threonine--tRNA ligase [Algoriphagus sp. PR1]
          Length = 649

 Score =  525 bits (1353), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 266/633 (42%), Positives = 399/633 (63%), Gaps = 19/633 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSI 59
           M   IK+T PDGS + +    TG  +A SIS  LA+  +A  +N +V D + P+++  ++
Sbjct: 1   MSQQIKITLPDGSERMYEKGTTGLQIAASISEGLARNVLAAKVNDQVWDATRPIQDDANV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDE 118
           +++T  D        HS AH++AEA++++ P ++  IGP IE GFYYD D  E+     E
Sbjct: 61  QLLTWNDGEGKNTFWHSSAHLLAEALEALHPGIKFGIGPPIETGFYYDVDFGEKTLDGSE 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L  IEKKM E+    + ++++ +S   A   ++ K + YK+++LE +    ++T Y QG 
Sbjct: 121 LEAIEKKMVELAREKNEYIRKDISKSDAVAYYQEKGDEYKLDLLEGL-EDGSITFYEQGN 179

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + DLCRGPH+ +TG +K   KL  +AGAYWRGD NR ML+RIYG  +   +EL +YL  +
Sbjct: 180 FVDLCRGPHIPNTGFIKAV-KLTNIAGAYWRGDENRKMLTRIYGVTFPKAKELKEYLEMI 238

Query: 239 EESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINT 296
           EE++KRDHRKL RE++LF  +E  G G+  W  KG  + + L++++++ + K  Y+++ T
Sbjct: 239 EEAKKRDHRKLGRELELFTFSEKVGMGLPLWLPKGTLLRERLVNFLKKAQDKAGYQQVIT 298

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +  + L++ SGH++ Y  + F       T  +   F LKPMNCP H  ++ H   SY+
Sbjct: 299 PHIGHKVLYETSGHYEKYGKDSFQPIT---TPHEGEEFLLKPMNCPHHCEIYKHKPHSYK 355

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ELP+R AEFG+VYR E SG LHGL RVRGFTQDDAH+FC  +Q+  E +K+ +L++ ++K
Sbjct: 356 ELPIRYAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCRPDQVKEEFIKVIDLVLYVFK 415

Query: 417 DFGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
             GF+    ++S R    PEK +G D  WD      K     I+ +++  ++T   LGE 
Sbjct: 416 ALGFDDFTAQISLRDPENPEKYIGGDEAWD------KAESAIIEAAAEKGLDTVTELGEA 469

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           AFYGPK ++++KDA+GR WQ GTIQVD+ LP RF   Y+ S ++K  PVMIHRA FGS+E
Sbjct: 470 AFYGPKLDFMVKDALGRKWQLGTIQVDYQLPERFQLEYIGSDNQKHRPVMIHRAPFGSLE 529

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
           RF+ ++IE+  GN PLWLSP Q  +  I+   V+YA+EI  +L    +S   D R+E I 
Sbjct: 530 RFVAVLIEHCAGNFPLWLSPEQINILPISEKFVDYAEEIKGILDEAGISGSIDNRDEKIG 589

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
            KIR+  +KK+P ++I G+KE  ER + +R+ G
Sbjct: 590 RKIRDSEVKKVPFMLIVGEKEKEERKLSVRKHG 622


>gi|319938817|ref|ZP_08013181.1| threonyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
 gi|319811867|gb|EFW08133.1| threonyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
          Length = 650

 Score =  525 bits (1353), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 263/644 (40%), Positives = 413/644 (64%), Gaps = 23/644 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+TFPDG++  +   +T  D+A+SIS SLAKKA+A   NGK+ D + P+ E GSIEI+T
Sbjct: 2   IKITFPDGAVHEYESGSTTFDIAQSISNSLAKKALAGKFNGKLIDTTRPITEDGSIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQI 122
           P+   +L ++RHS AH+ A+A + ++P++ + +GP I+DGFYYD D      S+++L +I
Sbjct: 62  PDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIQDGFYYDTDNTAGQISNEDLPRI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWFD 181
           E++M++I+  + P +++ ++ ++ARE+F  K + YK+E++E     E  +T+YRQGE+ D
Sbjct: 122 EEEMKKIVKENFPSIREEVTKDQAREIF--KNDPYKLELIEEHSEDEGGLTIYRQGEYVD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++  F L+ VAGAYWRG+S+  M+ RIYGTAW  +++L  YL   EE+
Sbjct: 180 LCRGPHVPSTGRIQ-IFHLLNVAGAYWRGNSDNAMMQRIYGTAWFDKKDLKNYLQMREEA 238

Query: 242 EKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+ E G G+ FW   G  I + +  Y+  R++ D Y+ + TP +
Sbjct: 239 KERDHRKLGKELDLFMISPEVGQGLPFWLPDGATIRRIVERYITDREVNDGYQHVYTPPL 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHW+ Y+ +MF        + D   F L+PMNCP H+ V+ + + SYRELP
Sbjct: 299 ASVELYKTSGHWEHYQEDMFPPM----DMGDGEQFVLRPMNCPHHIEVYKNHVHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  T +D+H+F   EQ+  E   + +L+I +YKDF 
Sbjct: 355 IRIAELGMMHRFEKSGALSGLQRVREMTLNDSHLFVMPEQIQEEFKHVLDLMIDVYKDFN 414

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R      K   +D +W++A+ ++KG +D +       ++     GE AFY
Sbjct: 415 ITDYRFRLSYRDPNDKHKYFDNDEMWENAQRMLKGAMDDLG------LDYFEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G +    TIQ+DF LP RF+  YV +  E+  PVMIHR +  ++ERFI
Sbjct: 469 GPKLDVQVKTALGNEETLSTIQLDFLLPERFDLHYVGADGEEHRPVMIHRGIVSTMERFI 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
             +IE +KG  P WL+P Q  V  I++ A  +YA ++A  L++  + ++ D RNE + YK
Sbjct: 529 AYLIETYKGAFPTWLAPHQVTVIPISNEAHADYAWKVAKELRNRGVRVDVDERNEKMQYK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           IR+    K+P  +I GDKE ++ ++ +RR+G   T   ++ + +
Sbjct: 589 IRQSQTHKVPYQLIVGDKEQADGTVNVRRYGQKQTHTETIAEFV 632


>gi|282906079|ref|ZP_06313934.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282331371|gb|EFB60885.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Btn1260]
          Length = 645

 Score =  525 bits (1353), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 267/636 (41%), Positives = 402/636 (63%), Gaps = 21/636 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           I + FPD + K F    T  D+A+SIS  L KKAVA   NG++ DL+ P+  +GSIEI+T
Sbjct: 4   INIQFPDVNKKAFDKGTTTEDIAQSISPGLRKKAVAGKFNGQLVDLTKPLETDGSIEIVT 63

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P    +L V+RHS AH+MA A++ ++  V+  +GP+IE GFYYDFD +Q  SSD+  QIE
Sbjct: 64  PGSEEALEVLRHSTAHLMAHAIKRLYGNVKFGVGPVIEGGFYYDFDIDQNISSDDFEQIE 123

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K M++I+  +    ++ +S ++A+ELF +  + YK+E++++IP  ENVTLY QG++ DLC
Sbjct: 124 KTMKQIVNENMKIERKVVSRDEAKELFSN--DEYKLELIDAIPEDENVTLYSQGDFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RG HV ST ++K+F KL+  AGAYWRGDSN  ML RIYGTA+  ++EL  +L  LEE ++
Sbjct: 182 RGVHVPSTAKIKEF-KLLSTAGAYWRGDSNNKMLQRIYGTAFFDKKELKAHLQMLEERKE 240

Query: 244 RDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLD 301
           RDHRK+ +E++LF  ++  G+G+  W   G  I + +  Y+  +++   Y+ + TP + +
Sbjct: 241 RDHRKIGKELELFTNSQLVGAGLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLAN 300

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             L++ SGHWD Y+ +MF     D+T     +  L+PMNCP H+ ++ +   SYRELP+R
Sbjct: 301 VDLYKTSGHWDHYQEDMFPPMQLDET----ESMVLRPMNCPHHMMIYANKPHSYRELPIR 356

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AE G+++R E SG++ GL RVRG T +D+H+F   +Q+  E  ++ N+II +YKDFGFE
Sbjct: 357 IAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVNMIIDVYKDFGFE 416

Query: 422 KIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
               +LS R     EK    D +W+ AEN++K   D +  S ++ I      GE AFYGP
Sbjct: 417 DYSFRLSYRDPEDKEKYFDDDDMWNKAENMLKEAADELGLSYEEAI------GEAAFYGP 470

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  +K A+G++    T Q+DF LP RF+  Y+    E   PV+IHR V  ++ERF+  
Sbjct: 471 KLDVQVKTAMGKEETLSTAQLDFLLPERFDLTYIGQDGEHHRPVVIHRGVVSTMERFVAF 530

Query: 538 MIENFKGNLPLWLSPIQA-IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           + E  KG  P WL+P Q  I+        +YA+++ + LKS  + +  D RNE + YKIR
Sbjct: 531 LTEETKGAFPTWLAPKQVQIIPVNVDLHYDYARQLQDELKSQGVRVSIDDRNEKMGYKIR 590

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
           E  ++KIP  I+ GDKE     + +R++GS   + V
Sbjct: 591 EAQMQKIPYQIVVGDKEVENNQVNVRQYGSQDQETV 626


>gi|326789266|ref|YP_004307087.1| threonyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
 gi|326540030|gb|ADZ81889.1| threonyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
          Length = 586

 Score =  525 bits (1353), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 258/592 (43%), Positives = 377/592 (63%), Gaps = 15/592 (2%)

Query: 54  VREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQP 113
           +++G ++    E+       RH+ +H++A+AV+ ++P  + AIGP+IEDGFYYDF+ +  
Sbjct: 5   MKDGLVKDFKFEEKEGKNAFRHTASHVLAQAVKRLYPTTKCAIGPVIEDGFYYDFEFDFE 64

Query: 114 FSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTL 173
           F++  L +IE++M++I+       +  L+ E+A  L + K E YK+E++  +P    ++ 
Sbjct: 65  FTAANLVEIEQEMRKIVKESLSLQRYTLNREEALALMKEKNEPYKIELINDLPEDAQLSF 124

Query: 174 YRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQ 233
           Y+QG++ +LC GPHV +T  +K F KL   AGAYWRG+    ML+RIYGTA+    +L  
Sbjct: 125 YQQGDYLELCAGPHVTNTSLIKAF-KLTATAGAYWRGNEKNKMLTRIYGTAFPKSSDLEA 183

Query: 234 YLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYE 292
           YL  +EE++KRDHRKL +E+ LF I ++G G  F+  KG  +   LI Y R+   ++ Y 
Sbjct: 184 YLQSIEEAKKRDHRKLGKELGLFTILDEGPGFPFFLPKGMVLKNLLIDYWRKLHTREGYV 243

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           EI+TP +L++ LW+ SGHWD YR NM+       T+ D   FA+KPMNCPG + V+    
Sbjct: 244 EISTPMMLNKELWETSGHWDHYRENMYT------TVIDDTDFAIKPMNCPGGMLVYKLQP 297

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
            SYRELP+R+ E G V+R+E SG+LHGLMRVR FTQDDAH+F T+EQ+ +E   +  LI 
Sbjct: 298 HSYRELPIRMGELGLVHRHEKSGALHGLMRVRCFTQDDAHIFMTQEQITDEIKGVVRLID 357

Query: 413 SIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
            +Y  FGF K  V+LSTRPE  +GSD  W+ A   +K  LD ++      +   +  G+G
Sbjct: 358 EVYSKFGF-KYHVELSTRPENSIGSDEDWNVATEGLKKALDEMQ------LEYVINEGDG 410

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           AFYGPK ++ L+D+IGR WQCGTIQ+DF LP RF A Y+ +  +K  P+MIHR VFGSIE
Sbjct: 411 AFYGPKIDFHLEDSIGRTWQCGTIQLDFQLPVRFEAEYIGADGKKHRPIMIHRVVFGSIE 470

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
           RFIGI+IE++ G  PLWL+P+Q  V  I+    EY   +   L+   +  E D R+E I 
Sbjct: 471 RFIGILIEHYAGKFPLWLAPVQVKVLPISDKFSEYGAFVMAELQKQGIRCEIDNRDEKIG 530

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           YKIRE  + K+P +++ G KE     + IRR   +T +  S+ + + +L  E
Sbjct: 531 YKIREAQLGKVPYMVVVGQKEVESNLVTIRRRDESTQEGYSIQEFVQLLNNE 582


>gi|255994452|ref|ZP_05427587.1| threonine--tRNA ligase [Eubacterium saphenum ATCC 49989]
 gi|255993165|gb|EEU03254.1| threonine--tRNA ligase [Eubacterium saphenum ATCC 49989]
          Length = 581

 Score =  525 bits (1352), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 250/550 (45%), Positives = 369/550 (67%), Gaps = 15/550 (2%)

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           RH+ +HIMA+A++ +WPE ++AIGP I+DGFYYD D +   + D+L +I+K+M++II  +
Sbjct: 18  RHTSSHIMAQAIKRLWPEAKLAIGPAIKDGFYYDVDLDHKITDDDLKKIQKEMKKIIKAN 77

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQ 193
            P  K  LS +KA EL   K E YKVE++  +P+ E ++ Y QGE+ DLC GPHV STG+
Sbjct: 78  YPLEKSILSRDKALELMRQKDEDYKVELINDLPSDEEISFYTQGEFTDLCAGPHVESTGK 137

Query: 194 VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREM 253
           +K   KLM VAGAYWRG+    ML R+YGTA+++Q+EL +Y+  +EE++KRDHRK+ +EM
Sbjct: 138 IKAI-KLMSVAGAYWRGNEKNKMLQRVYGTAFSSQEELQEYIDRIEEAKKRDHRKIGKEM 196

Query: 254 DLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWD 312
           DLF + E+G G  F+   G  +   L +Y R++  K  Y+EI TP +L + LW  SGH+D
Sbjct: 197 DLFALMEEGPGFPFFLPNGMILRTELENYWRQEHRKRGYDEIKTPLILSEELWHTSGHYD 256

Query: 313 SYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE 372
            Y+ NM+     D        +A+KPMNCPG +  +   L SYR+ P+RLAE G V+R+E
Sbjct: 257 HYKENMYFTSIDD------AEYAIKPMNCPGAMLTYKRKLYSYRDFPIRLAELGQVHRHE 310

Query: 373 PSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
             G+LHGLMRVR FTQDDAH+F T + + +E  ++ + I  +Y  FGF K  ++LSTRPE
Sbjct: 311 LHGALHGLMRVRTFTQDDAHIFMTPDIVKDEIKRVVSFIDDVYNLFGF-KYHIELSTRPE 369

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
             +G+D  W+ A + ++     IK   +D +   +  G+GAFYGPK ++ L+D++GR WQ
Sbjct: 370 DSMGTDEEWNHAIDSLEA---AIKEMGKDYV---INEGDGAFYGPKLDFHLEDSLGRTWQ 423

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
           CGTIQ+DF +P +F+  YV S  EK  P++IHR +FGSIERFIGI+IE+F G  PLWL+P
Sbjct: 424 CGTIQLDFQMPQKFDLTYVGSDGEKHRPIIIHRVIFGSIERFIGILIEHFAGKFPLWLAP 483

Query: 553 IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
            Q  + T+T   V YA++++  L  H + ++ D RNE I YK+R+   +++  + + G++
Sbjct: 484 EQVRLLTVTEKFVPYAEKVSKELAKHGIRVKVDARNEKIGYKLRQGRNERVSYLAVIGER 543

Query: 613 EASERSIGIR 622
           EA   ++ +R
Sbjct: 544 EAEADTLSVR 553


>gi|225870895|ref|YP_002746842.1| threonyl-tRNA synthetase [Streptococcus equi subsp. equi 4047]
 gi|225700299|emb|CAW94574.1| threonyl-tRNA synthetase [Streptococcus equi subsp. equi 4047]
          Length = 655

 Score =  525 bits (1352), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 269/636 (42%), Positives = 404/636 (63%), Gaps = 23/636 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           I +TFPDG+++ F    T  ++A+SIS+SLAKKA+A   NG++ D +  + E GSIEIIT
Sbjct: 9   ITITFPDGAVREFESGVTTFEIADSISKSLAKKALAGKFNGQLIDTTRAIEEDGSIEIIT 68

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
            +   +  V+RHS AH+ A+A + ++P++ + +GP I DGFYYD D  +   S+++L +I
Sbjct: 69  ADHEDAFEVLRHSAAHLFAQAAKRLFPKLHLGVGPAIADGFYYDTDNADGQISNEDLPRI 128

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFD 181
           E++M++I+  + P +++ ++ E+A ELF  K + YKVE++ E       +T+YRQGE+ D
Sbjct: 129 EEEMKKIVKENFPCIREEITKEEALELF--KDDPYKVELINEHADDAAGLTVYRQGEFVD 186

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++  F L+ VAGAYWRG+S+  M+ R+YGTAW  +++L  YL  LEE+
Sbjct: 187 LCRGPHVPSTGRIR-VFHLLNVAGAYWRGNSDNNMMQRVYGTAWFDKKDLKAYLTRLEEA 245

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+++ G G+ FW   G  I +TL  Y+  K +   Y+ + TP +
Sbjct: 246 KERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRTLERYITDKELASGYQHVYTPPL 305

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHW+ Y+ +MF        + D   F L+PMNCP H+ V+ + + SYRELP
Sbjct: 306 ASVELYKTSGHWEHYQEDMFPTM----DMGDGEEFVLRPMNCPHHIQVYKNHVHSYRELP 361

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  T +D H+F T EQ+  E  +   LII +Y+DF 
Sbjct: 362 IRIAELGMMHRYEKSGALSGLQRVREMTLNDGHLFVTPEQIQEEFQRALQLIIDVYEDFN 421

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R      K   +D +W++A++++K  LD +     D        GE AFY
Sbjct: 422 LTDYRFRLSYRDPKDTHKYYDNDEMWENAQSMLKAALDEM---GADYFEAE---GEAAFY 475

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G +    TIQ+DF LP RFN  Y+ +  E+  PVMIHR V  ++ERF 
Sbjct: 476 GPKLDIQVKTALGNEETLSTIQLDFLLPERFNLSYIGADGEEHRPVMIHRGVISTMERFT 535

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IE +KG  P WL+P Q  V  I++ A ++YA E+A +L+ H +  + D RNE + YK
Sbjct: 536 AILIETYKGAFPTWLAPRQVTVIPISNEAHIDYAWEVAKILRDHGIRADVDDRNEKMQYK 595

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
           IR     KIP  +I GDKE  ++S+ +RR+GS  T 
Sbjct: 596 IRASQTSKIPYQLIVGDKEMQDKSVNVRRYGSKATH 631


>gi|46199818|ref|YP_005485.1| threonyl-tRNA synthetase [Thermus thermophilus HB27]
 gi|73919837|sp|Q72HH1|SYT_THET2 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|46197445|gb|AAS81858.1| threonyl-tRNA synthetase [Thermus thermophilus HB27]
          Length = 659

 Score =  525 bits (1352), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 262/636 (41%), Positives = 405/636 (63%), Gaps = 25/636 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           + +  PDG     P  AT  DVA ++     ++AV   ++G++ DL  P+ +G+ + ++T
Sbjct: 1   MTVYLPDGKPLELPEGATAKDVARALGEGWERRAVGAIVDGELYDLLKPLPQGAKVRLLT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPE-------VQVAIGPIIEDGFYYDFDKEQPFSS 116
            +DP    + RH+ AH++A+AV+  + E       V++ +GP+IE GFYYD +  +P S 
Sbjct: 61  EKDPEFQTLFRHTLAHVLAQAVKEFFREKGYDPESVRLGVGPVIEKGFYYDIEAPEPLSD 120

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
           ++L  IE KM+EI+ RD P  +  LS E+A   +  K + YK E++  IP  E ++ Y+Q
Sbjct: 121 EDLPAIEAKMREILKRDLPLRRFVLSREEALARYRGK-DPYKTELILEIPEGEEISFYQQ 179

Query: 177 GE----WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELT 232
           G+    + DLCRGPHV STG++   FKL  VAGAYWRGD NRPML R+YG A+ T +EL 
Sbjct: 180 GDEAYGFTDLCRGPHVPSTGRIPPHFKLTHVAGAYWRGDENRPMLQRVYGVAFRTAEELK 239

Query: 233 QYLYFLEESEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDD 290
           +YL+ LEE++KRDHR+L RE++LF I    G G++ W  KG  + + L+++MR  +++  
Sbjct: 240 EYLWQLEEAKKRDHRRLGRELELFLIDPMVGKGLVLWLPKGNVVREELMAFMREEQVRRG 299

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH 350
           Y+ + TP +    L++ SGH+  Y  + F      +  ++   + LKPMNCP H+ ++ +
Sbjct: 300 YQLVTTPHIGSLELYKTSGHYPYYAESQFPPISFKERGEE-EEYLLKPMNCPHHIRIYAY 358

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
             +SYRELP+RLAEFG+VYR E +G L GL RVRGFTQDDAH+FCT E++  E L + +L
Sbjct: 359 RKRSYRELPLRLAEFGTVYRYEKAGELLGLTRVRGFTQDDAHIFCTPEEVKGEFLGVLDL 418

Query: 411 IISIYKDFGFEKIMVKLSTR---PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGV 467
           ++ ++   G +    ++  R    +K VG +A W  AE  ++      + +++  +   V
Sbjct: 419 VLKVFATLGLKDYRARIGVRDPKSDKYVGDEAKWALAERQIE------EAAAEAGLRYTV 472

Query: 468 LLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAV 527
             G+ AFYGPK ++++KDA+GR+WQ GTIQVD+NLP RF   YV    E+  PVM+HRA 
Sbjct: 473 EEGDAAFYGPKLDFVVKDALGREWQLGTIQVDYNLPERFGLTYVGKDGEEHRPVMLHRAP 532

Query: 528 FGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR 587
           FGS+ERFIGI+IE+F G+ PLWL+P+QA+V  ++     YA+E+A  LK   L  E D R
Sbjct: 533 FGSLERFIGILIEHFAGDFPLWLAPVQAVVVPVSEKQEGYAREVAGRLKEAGLRAEADTR 592

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRR 623
            E +  +IR+  ++K+P +++ G++E +E ++ +RR
Sbjct: 593 PERMQARIRDAEVQKVPYVLVVGEREKAEGAVSVRR 628


>gi|223932680|ref|ZP_03624679.1| threonyl-tRNA synthetase [Streptococcus suis 89/1591]
 gi|223898650|gb|EEF65012.1| threonyl-tRNA synthetase [Streptococcus suis 89/1591]
          Length = 650

 Score =  525 bits (1352), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 263/640 (41%), Positives = 406/640 (63%), Gaps = 23/640 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           +K+TFPDG+++++    T  ++AESIS+SLAKKA+A   NGK+ D +  + E G++EI+T
Sbjct: 2   LKITFPDGAVRDYQAGVTTFEIAESISKSLAKKALAGKFNGKLIDTTRAIEEDGTLEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQI 122
           P+   +L ++RHS AH+ A+A + ++P++++ +GP I+DGFYYD D      S+++L +I
Sbjct: 62  PDHEDALDILRHSAAHLFAQAARRLFPDIKLGVGPAIQDGFYYDTDNAAGQISNEDLPRI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWFD 181
           +++M +I+  + P  ++ ++ E+A ++F  K + YK+E+++     E  +T+Y QGE+ D
Sbjct: 122 QEEMMKIVKENFPSERREVTKEEALDIF--KNDPYKLELIQEHSDDEGGLTIYTQGEYVD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++  F+L+ VAGAYWRG S  PM+ R+YGTAW  +++L  YL   EE+
Sbjct: 180 LCRGPHVPSTGRIQ-IFELLNVAGAYWRGKSENPMMQRVYGTAWFDKKDLKAYLQMREEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+++ G G+ FW   G  I +TL  Y+  K +   Y+ + TP +
Sbjct: 239 KERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRTLERYITDKELASGYQHVYTPPL 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHWD Y  +MF        + D   F L+PMNCP H+ V+ + ++SYRELP
Sbjct: 299 ASVELYKTSGHWDHYHEDMFPTM----DMGDGEEFVLRPMNCPHHIQVYKNHVRSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           VR+AE G ++R E SG+L GL RVR  T +D H+F T EQ+  E  K   LII +Y DF 
Sbjct: 355 VRIAELGMMHRYEKSGALTGLQRVREMTLNDGHIFVTPEQIQEEFKKALQLIIDVYADFN 414

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R     EK   +D +W++A+ ++KG +D +       ++     GE AFY
Sbjct: 415 LNDYRFRLSYRDPEDKEKYYDNDEMWENAQRMLKGAMDEMG------VDYFEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G +    TIQ+DF LP RF   Y+ +  E+  PVMIHR V  ++ERF 
Sbjct: 469 GPKLDIQVKTALGNEETLSTIQLDFLLPERFGLTYIGADGEEHRPVMIHRGVISTMERFT 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IE +KG  P WL+P Q  +  I+  A ++YA ++A  L+   + +  D RNE + YK
Sbjct: 529 AILIETYKGAFPTWLAPTQVTMIPISVEAHLDYAWKVAKELQDRGVRVHVDERNEKMQYK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           IR+    KIP  +I GDKE  + ++ +RR+GS  TQ  S+
Sbjct: 589 IRQSQTSKIPYQLIVGDKEMEDNAVNVRRYGSKATQTQSV 628


>gi|325694840|gb|EGD36745.1| threonine--tRNA ligase [Streptococcus sanguinis SK150]
          Length = 647

 Score =  525 bits (1352), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 260/640 (40%), Positives = 409/640 (63%), Gaps = 23/640 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+TFPDG+++ F   AT  ++A+SIS SLAKKA+A   NGK+ D +  + E G+IEI+T
Sbjct: 2   IKITFPDGAVREFEFGATTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGAIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQI 122
           P+   +L ++RHS AH+ A+A + ++P++ + +GP I+DGFYYD D E    S+++L +I
Sbjct: 62  PDHEDALDILRHSAAHLFAQAARRLFPDIHLGVGPAIQDGFYYDTDNEAGQISNEDLPRI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWFD 181
           E++M++I+  + P +++ ++ ++ARE+F  K + YK+E++E     E  +T+YRQGE+ D
Sbjct: 122 EEEMKKIVKENFPSIREEVTKDEAREIF--KNDPYKLELIEEHSEDEGGLTIYRQGEYVD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++  F L+ VAGAYWRG+S+  M+ R+YGTAW  +++L +YL   EE+
Sbjct: 180 LCRGPHVPSTGRIQ-IFHLLNVAGAYWRGNSDNAMMQRVYGTAWFDKKDLKKYLQMREEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+++ G G+ FW   G  + + L  Y+  +++   Y+ + TP +
Sbjct: 239 KERDHRKLGKELDLFMISQEVGQGLPFWLPNGATVRRELERYIVDKELASGYQHVYTPPL 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHW+ Y+ +MF        + D   F L+PMNCP H+ V+ H + SYRELP
Sbjct: 299 ASVELYKTSGHWEHYQEDMFPTM----DMGDGEEFVLRPMNCPHHIQVYKHHVHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y DF 
Sbjct: 355 IRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYADFN 414

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
             +   +LS R      K   +D +W++A+ +++  LD +       ++     GE AFY
Sbjct: 415 LTEYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMD------VDYFEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G +    TIQ+DF LP RF+  YV +  E+  PVMIHR V  ++ERF 
Sbjct: 469 GPKLDIQVKTALGNEETLSTIQLDFLLPERFDLKYVGADGEEHRPVMIHRGVISTMERFT 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IEN+KG  P WL+P Q  +  +++ A ++YA ++A  L+   +  + D RNE + YK
Sbjct: 529 AILIENYKGAFPTWLAPHQVTLIPVSNEAHIDYAWQVAKKLRDKGVRADVDERNEKMQYK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           IR     KIP  +I GDKE  + ++ +RR+G   T  + +
Sbjct: 589 IRASQTSKIPYQLIVGDKEVEDGTVNVRRYGQKETHTIPV 628


>gi|320109353|ref|YP_004184943.1| threonyl-tRNA synthetase [Terriglobus saanensis SP1PR4]
 gi|319927874|gb|ADV84949.1| threonyl-tRNA synthetase [Terriglobus saanensis SP1PR4]
          Length = 676

 Score =  525 bits (1352), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 278/672 (41%), Positives = 390/672 (58%), Gaps = 48/672 (7%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAING--------------- 45
           M   IK+  PDGSI+  P   T  D+A SIS  LA   V   I                 
Sbjct: 1   MSEQIKIHLPDGSIREVPSGTTPLDIATSISPRLAAVVVVARIKALHAAPPASTTDETTS 60

Query: 46  -------------KVCDLSDPVREG-SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE 91
                        K+ DL  P+ E  S+E++   DP +L V+RHS AH+MA A+  ++PE
Sbjct: 61  EDAMYAADNTAAEKIVDLRQPLTEDVSLELLKESDPDALKVLRHSAAHVMATAITELYPE 120

Query: 92  VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFE 151
           V++  GP  ++GF+YD  +E+PF+ D+LA IE++M +++ RD PFL+ Y   E+A   + 
Sbjct: 121 VKLGHGPATDNGFFYDIYREKPFTPDDLAAIEQRMADVVKRDEPFLRSYEPREQALADYA 180

Query: 152 SKKEAYKVEILESIP-AKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRG 210
           +  E  K   +E      E V+LY+ G + D CRGPHV STG+VK + K+  +AGAYW G
Sbjct: 181 AHGEFMKQHFIEKFTHPGEEVSLYKNGAFTDFCRGPHVPSTGRVKAY-KVTTIAGAYWLG 239

Query: 211 DSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAE-DGSGVIFWH 269
           D   P L R+YGTA+  Q++L  +   LEE + RDHR L +++DLF I E  GSG+IFWH
Sbjct: 240 DEKNPQLQRVYGTAFYNQKDLDAHFKHLEEIKARDHRVLGKQLDLFSIQELAGSGLIFWH 299

Query: 270 RKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTI 328
             G  I +T+  +MR + ++  Y+ + TP V+ + LWQ SGH   Y  NM+A    DD  
Sbjct: 300 PNGAIIRKTMEDWMRDECLRRGYDLVVTPHVMRRELWQISGHEGFYGQNMYAPMELDDA- 358

Query: 329 KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQ 388
                + LKPMNCPGH+ ++ +  KSYR+LPVR AE G+VYR E SG++HGL+RVRGFTQ
Sbjct: 359 ----EYRLKPMNCPGHILIYKNSPKSYRDLPVRYAELGNVYRYERSGTMHGLLRVRGFTQ 414

Query: 389 DDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST----RPEKRVGSDALWDDA 444
           DDAH+FCT  Q+ +E +        +   FGF +  V+LST      +  VG    W+ A
Sbjct: 415 DDAHIFCTPAQIEDEVVACVEFAEEVLHKFGFNEFKVELSTWDPNDAKHYVGDPKDWELA 474

Query: 445 ENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPS 504
            N +K  L+  KN     I      GE AFYGPK +  L D +GR WQ  T+Q DFNLP 
Sbjct: 475 VNGLKTALNR-KNIPYKEIP-----GEAAFYGPKIDVKLVDVLGRLWQLSTVQFDFNLPR 528

Query: 505 RFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA 564
           RF   Y     EK  PVM+HRA+FGS+ERF G++IE++ G  PLWL+PIQ  +  I+   
Sbjct: 529 RFELEYTGEDGEKHQPVMVHRALFGSVERFFGVLIEHYAGAFPLWLAPIQIGLVPISEKH 588

Query: 565 VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRF 624
             YA+ +   L++  L +  D RNE +N KIR+ +++K+P ++I GDKEA  +++ +R  
Sbjct: 589 TAYAETVKKELEAIGLRVTLDARNEKMNAKIRDLTLQKVPFVLIMGDKEAEAKAVSVRTR 648

Query: 625 GSTTTQKVSLLD 636
           G        L D
Sbjct: 649 GKGDEGSTPLAD 660


>gi|302024085|ref|ZP_07249296.1| threonyl-tRNA synthetase [Streptococcus suis 05HAS68]
 gi|330832440|ref|YP_004401265.1| threonyl-tRNA synthetase [Streptococcus suis ST3]
 gi|329306663|gb|AEB81079.1| threonyl-tRNA synthetase [Streptococcus suis ST3]
          Length = 649

 Score =  525 bits (1351), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 264/644 (40%), Positives = 407/644 (63%), Gaps = 23/644 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+TFPDG+++ +    T  ++AESIS+SLAKKA+A   NGK+ D +  + E G++EI+T
Sbjct: 2   IKITFPDGAVREYQAGVTTFEIAESISKSLAKKALAGKFNGKLIDTTRAIEEDGTLEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQI 122
           P+   +L ++RHS AH+ A+A + ++P++++ +GP I+DGFYYD D      S+++L +I
Sbjct: 62  PDHEDALDILRHSAAHLFAQAARRLFPDIKLGVGPAIQDGFYYDTDNAAGQISNEDLPRI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWFD 181
           +++M +I+  + P  ++ ++ E+A E+F  K + YK+E+++     E  +T+Y QGE+ D
Sbjct: 122 QEEMMKIVKENFPSERREVTKEEAIEIF--KNDPYKLELIQEHSDDEGGLTIYTQGEYID 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++  F+L+ VAGAYWRG S  PM+ R+YGTAW  +++L  YL   EE+
Sbjct: 180 LCRGPHVPSTGRIQ-IFELLNVAGAYWRGKSENPMMQRVYGTAWFDKKDLKAYLQMREEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+++ G G+ FW   G  I +TL  Y+  K +   Y+ + TP +
Sbjct: 239 KERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRTLERYITDKELTSGYQHVYTPPL 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHW+ Y  +MF        + D   F L+PMNCP H+ V+ + ++SYRELP
Sbjct: 299 ASVELYKTSGHWEHYSEDMFPTM----DMGDGEEFVLRPMNCPHHIQVYKNHVRSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           VR+AE G ++R E SG+L GL RVR  T +D H+F T EQ+  E  K   LII +Y DF 
Sbjct: 355 VRIAELGMMHRYEKSGALTGLQRVREMTLNDGHIFVTPEQIQEEFKKALQLIIDVYADFN 414

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R     EK   +D +W++A+ ++KG +D +       ++     GE AFY
Sbjct: 415 LNDYRFRLSYRDPEDKEKYYDNDEMWENAQRMLKGAMDEMG------VDYFEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G +    TIQ+DF LP RF   Y+ +  E+  PVMIHR V  ++ERF 
Sbjct: 469 GPKLDIQVKTALGNEETLSTIQLDFLLPERFGLTYIGADGEEHRPVMIHRGVISTMERFT 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IE +KG  P WL+P Q  +  I+  A ++YA ++A  L+   + +  D RNE + YK
Sbjct: 529 AILIETYKGAFPTWLAPTQVTMIPISVEAHLDYAWKVAKELQDRGVRVHVDERNEKMQYK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           IR+    KIP  +I GDKE  + ++ +RR+GS  TQ  S+ + +
Sbjct: 589 IRQSQTSKIPYQLIVGDKEMEDNAVNVRRYGSKATQTQSVAEFV 632


>gi|195978510|ref|YP_002123754.1| threonyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
 gi|195975215|gb|ACG62741.1| threonyl-tRNA synthetase ThrS [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
          Length = 655

 Score =  524 bits (1350), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 267/636 (41%), Positives = 404/636 (63%), Gaps = 23/636 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           I +TFPDG+++ F    T  ++A+SIS+SLAKKA+A   NG++ D +  + E GSIEIIT
Sbjct: 9   ITITFPDGAVREFESGVTTFEIADSISKSLAKKALAGKFNGQLIDTTRAIEEDGSIEIIT 68

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
            +   +  V+RHS AH+ A+A + ++P++ + +GP I DGFYYD D  +   S+++L +I
Sbjct: 69  ADHEDAFEVLRHSAAHLFAQAAKRLFPKLHLGVGPAIADGFYYDTDNADGQISNEDLPRI 128

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFD 181
           E++M++I+  + P +++ ++ E+A ELF  K + YKVE++ E       +T+YRQGE+ D
Sbjct: 129 EEEMKKIVKENFPCIREEITKEEALELF--KDDPYKVELINEHADDAAGLTVYRQGEFVD 186

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++  F L+ VAGAYWRG+S+  M+ R+YGTAW  +++L  YL  LEE+
Sbjct: 187 LCRGPHVPSTGRIQ-VFHLLNVAGAYWRGNSDNSMMQRVYGTAWFDKKDLKAYLTRLEEA 245

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQV 299
           ++RDHRKL +E+DLF ++++ G G+ FW   G  I +TL  Y+  K +   Y+ + TP +
Sbjct: 246 KERDHRKLGKELDLFMVSQEVGQGLPFWLPNGATIRRTLERYITDKELASGYQHVYTPPL 305

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHW+ Y+ +MF        + D   F L+PMNCP H+ V+ + + SYRELP
Sbjct: 306 ASVELYKTSGHWEHYQEDMFPTM----DMGDGEEFVLRPMNCPHHIQVYKNHVHSYRELP 361

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  T +D H+F T EQ+  E  +   LII +Y+DF 
Sbjct: 362 IRIAELGMMHRYEKSGALSGLQRVREMTLNDGHLFVTPEQIQEEFQRALQLIIDVYEDFN 421

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R      K   +D +W++A++++K  LD +       ++     GE AFY
Sbjct: 422 LTDYRFRLSYRDPKDTHKYYDNDEMWENAQSMLKAALDEMG------VDYFEAEGEAAFY 475

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G +    TIQ+DF LP RFN  Y+ +  E+  PVMIHR V  ++ERF 
Sbjct: 476 GPKLDIQVKTALGNEETLSTIQLDFLLPERFNLSYIGADGEEHRPVMIHRGVISTMERFT 535

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IE +KG  P WL+P Q  V  I++ A ++YA E+A  L+ H +  + D RNE + YK
Sbjct: 536 AILIETYKGAFPTWLAPRQVTVIPISNEAHIDYAWEVAKTLRDHGIRADVDDRNEKMQYK 595

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
           IR     KIP  +I GDKE  ++S+ +RR+GS  T 
Sbjct: 596 IRASQTSKIPYQLIVGDKEMEDKSVNVRRYGSKATH 631


>gi|171780136|ref|ZP_02921040.1| hypothetical protein STRINF_01924 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171281484|gb|EDT46919.1| hypothetical protein STRINF_01924 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 697

 Score =  524 bits (1350), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 268/642 (41%), Positives = 412/642 (64%), Gaps = 23/642 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEI 61
           S +K+TFPDG+++ F    T  ++A+SIS SLAKKA+A   NG++ D +  + E GSIE+
Sbjct: 49  SMVKITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGELIDTTRAITEDGSIEV 108

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELA 120
           +TP+   +L ++RHS AH+ A+A + ++P++ + +GP IE+GFYYD D K    + ++L 
Sbjct: 109 VTPDHEDALGILRHSAAHLFAQAAKRLFPDLCLGVGPAIENGFYYDTDNKSGQITDEDLP 168

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEW 179
           +IE++M++I+  + P +++ +S E+ARELF  K + YK+E++E     E  +T+Y QGE+
Sbjct: 169 RIEEEMKKIVKENLPCVRKEISIEEARELF--KNDPYKLELIEEHGEDEGGLTVYTQGEF 226

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV STG+++  F L+ VAGAYWRG+S+  M+ R+YGTAW  +++L  YL   +
Sbjct: 227 TDLCRGPHVPSTGRIQ-VFHLLNVAGAYWRGNSDNAMMQRVYGTAWFDKKDLKAYLKQRQ 285

Query: 240 ESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTP 297
           E+++RDHRKL +E+DLF I+++ G G+ FW   G  I +TL  Y+  ++++  Y  + TP
Sbjct: 286 EAKERDHRKLGKELDLFMISQEVGQGLPFWLPDGATIRRTLERYIVDKEVESGYLHVYTP 345

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    L++ SGHWD YR +MF        + D   F L+PMNCP H+ V+ + + SYRE
Sbjct: 346 PLASVDLYKTSGHWDHYREDMFPTM----DMGDGEEFVLRPMNCPHHIQVYKYHVHSYRE 401

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  K   LII +Y+D
Sbjct: 402 LPIRIAEIGMMHRYEKSGALSGLQRVREMSLNDGHLFVTPEQIQEEFQKALQLIIDVYED 461

Query: 418 FGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           F   +   +LS R      K    D +W++A++++K  LD +       +      GE A
Sbjct: 462 FNLTEYRFRLSLRDPKDTHKYYDDDEMWENAQSMLKAALDEMG------VEYFEAEGEAA 515

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  +K A+G +    TIQ+DF LP RF   Y+ +  E+  PVMIHR V  ++ER
Sbjct: 516 FYGPKLDIQVKTALGNEETLSTIQLDFLLPERFGLTYIGADGEEHRPVMIHRGVISTMER 575

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETIN 592
           F  I+IEN+KG  P WL+P Q  V  +++ A V+YA EIA +L+   + ++ D RNE + 
Sbjct: 576 FTAILIENYKGAFPTWLAPHQVTVIPVSNEAHVDYAWEIAKVLRDKGVRVDVDERNEKMQ 635

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
            KIR+   KKIP  +I GDKE +++++ +RR+GS  T   S+
Sbjct: 636 LKIRQSQTKKIPYQLIVGDKEMADKTVNVRRYGSKQTHTESI 677


>gi|229916382|ref|YP_002885028.1| threonyl-tRNA synthetase [Exiguobacterium sp. AT1b]
 gi|259516484|sp|C4L461|SYT_EXISA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|229467811|gb|ACQ69583.1| threonyl-tRNA synthetase [Exiguobacterium sp. AT1b]
          Length = 647

 Score =  524 bits (1350), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 262/650 (40%), Positives = 405/650 (62%), Gaps = 22/650 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           I+LTFPDG++K F    T  DVA SIS  L KKA+A  ++G++ D   P+  +G IE++ 
Sbjct: 4   IQLTFPDGAVKEFEAGVTAEDVAGSISPGLRKKAIAAKLDGELIDYRRPIEHDGKIELVM 63

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPE---VQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           P+    L ++RHS AH+MA+A++ ++ E   + + IGP IE+GFYYD + ++  + ++L 
Sbjct: 64  PDSEDGLDLMRHSSAHLMAQAIKRLYGEDNNIYLGIGPTIENGFYYDIEMDRRINEEDLP 123

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IEK M+ I+  +    ++ +S ++A   ++   +  K+E++E IPA + +T+Y QGE+F
Sbjct: 124 EIEKMMKRIVDENLEITREVVSRDEALARYKELGDPLKIELIEDIPADQTLTIYHQGEFF 183

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV ST ++K  FKLM VAGAYWRGDS+  ML RIYGTAW T+++L ++L  LEE
Sbjct: 184 DLCRGPHVPSTSKLK-IFKLMSVAGAYWRGDSDNKMLQRIYGTAWATKEQLAEHLRLLEE 242

Query: 241 SEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           +++RDHRKL +E+DLF ++++ G G+  W  KG  I +T+  Y+  ++++  Y+ + TP 
Sbjct: 243 AKERDHRKLGKELDLFFVSQEVGQGLPMWLPKGASIRRTVERYIVDKELELGYQHVYTPV 302

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L++ SGHWD Y+ +MF     D+         L+PMNCP H+ ++ H  +SYREL
Sbjct: 303 LGSVDLYKTSGHWDHYQDDMFPKMEMDN-----EELVLRPMNCPHHMTIYKHEPRSYREL 357

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR    +D H F T EQM  E   I +LI  +Y DF
Sbjct: 358 PLRIAELGGMHRYEMSGALTGLQRVRYMVLNDGHTFVTPEQMKQEFKDIVHLIQEVYADF 417

Query: 419 GFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           G +    +LS R     EK   +DA+W+ A++ +K  +D ++      +      GE AF
Sbjct: 418 GIKDYRFRLSYRDPADKEKYFDNDAIWEMAQSQLKETMDELE------LPYFEAEGEAAF 471

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  ++ A+G++    T+Q+DF LP RF+  Y     +   P+++HR V  ++ERF
Sbjct: 472 YGPKLDVQVRTALGKEETLSTVQLDFLLPERFDLTYTGPDGKDHRPIVLHRGVVSTMERF 531

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
           +  +IE +KG  P WL+P+Q  +  ++    EY  E+   L    + +ETD R+E + YK
Sbjct: 532 VAYLIEEYKGAFPTWLAPVQVKLIPVSHVHDEYVAEVKAELVKRGVRVETDLRDEKLGYK 591

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IRE  +KKIP+ ++ GDKE  ER++ IRR+G       SL + I  LT E
Sbjct: 592 IREAQMKKIPMTLVLGDKERDERAVNIRRYGQQEQVSASLDEFIASLTDE 641


>gi|169824388|ref|YP_001691999.1| threonyl-tRNA synthetase [Finegoldia magna ATCC 29328]
 gi|238687735|sp|B0S169|SYT_FINM2 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|167831193|dbj|BAG08109.1| threonyl-tRNA synthetase [Finegoldia magna ATCC 29328]
          Length = 634

 Score =  524 bits (1350), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 261/621 (42%), Positives = 385/621 (61%), Gaps = 16/621 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
            ++   DGS K F    +  DV +SIS  LA+  V   ++GK+  L + +  +  ++ + 
Sbjct: 2   FEVKLKDGSAKEFDGEISLLDVCKSISEGLARDCVGAVVDGKIMGLMETIDSDCEVQFVK 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D     V  H+ +H+MA A+Q ++P  + AIGP I+ GFYYD D +  F  ++L +IE
Sbjct: 62  FDDDEGKQVFWHTSSHLMAYAIQRLYPGTKFAIGPSIDSGFYYDLDTDHKFVPEDLEKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M++I+  +   ++  +S ++A E F+++ + YKV+++E+      +TLY  G++ DLC
Sbjct: 122 AEMKKIVKENPKLVRVEISRKEALERFKNEGQDYKVDLIENFDEDATITLYEMGDFVDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+     +K F KL+ +AGAYWRGD N  ML RIYG ++  ++ L +YL  +EE++K
Sbjct: 182 RGPHLLDVKNIKAF-KLLSIAGAYWRGDENNKMLQRIYGISFPKKKLLDEYLDRMEEAKK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRK+ +EM LF I E+G G  F+H  G  +   L  +++ ++ +  Y +I TP +L++
Sbjct: 241 RDHRKIGKEMGLFSIQEEGPGFPFFHPNGMVVLNELEKFLKEQLLERGYGQIKTPLILNE 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
           HLW QSGHWD Y+ NM+  K       D   +A+KPMNCPG + V+   L SYRELP+++
Sbjct: 301 HLWHQSGHWDHYKENMYFTKI------DGEDYAIKPMNCPGSILVYKDELHSYRELPIKV 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AE G V+R+E SG+LHGL RVR F QDDAHVFC  EQ+  E  K  +    IY  FGF K
Sbjct: 355 AELGQVHRHELSGALHGLFRVRTFVQDDAHVFCLPEQIEEEVSKTIDFCDYIYSKFGF-K 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +GSD  WD A + +K  L+        +IN G    +GAFYGPK ++ 
Sbjct: 414 YEVELSTRPEDSMGSDEDWDLAISSLKNALE--HKGLPYKINEG----DGAFYGPKIDFH 467

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+DAIGR WQCGTIQ+DF +P RF+  Y+ S   K  P MIHRA+ GS ERF+GI+IE++
Sbjct: 468 LEDAIGRTWQCGTIQLDFQMPERFDMTYIASDGSKKRPAMIHRAILGSEERFMGILIEHY 527

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  PLWLSP+Q  +  I+    +YA E+   +K+  L ++ D R+E I  KIRE  +KK
Sbjct: 528 AGKFPLWLSPVQVEILPISDKFNDYAYELQQKMKARGLRVKVDDRSEKIGLKIRESQLKK 587

Query: 603 IPIIIICGDKEASERSIGIRR 623
           +   +I G  E     + +R+
Sbjct: 588 VNYSLIIGQNEIDNNEVSVRK 608


>gi|86158405|ref|YP_465190.1| threonyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|123736663|sp|Q2IJC0|SYT_ANADE RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|85774916|gb|ABC81753.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase
           [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 650

 Score =  524 bits (1350), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 276/657 (42%), Positives = 393/657 (59%), Gaps = 17/657 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSD-VAESISRSLAKKAVAVAINGKVCDLSDPV-REGS 58
           M   +K+T PDGS K  P      D V   I   LAK A    ++G   DLS  + R+  
Sbjct: 1   MSDLVKVTLPDGSQKEAPRGTPVIDFVKGQIGAGLAKAAYFAKLDGAPVDLSRALDRDAR 60

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           +EI+T   P +L V RH  AH+MA  VQ ++P  QV IGP IEDGFYYDF +E PF+ ++
Sbjct: 61  LEIVTTRSPEALEVARHDAAHVMASVVQKLYPGTQVTIGPAIEDGFYYDFARETPFTPED 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK--ENVTLYRQ 176
           L +IEK   E I  D PF++  +S E A  LFE   E YKVEI++ I AK  + +TLY+ 
Sbjct: 121 LEKIEKATNEAIKADLPFVRSEISMEAALALFEGMGERYKVEIVKDIAAKGAKTLTLYKH 180

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           G+W D C GPH  STG++    KL+ VAGAYWRGD+   ML RIYGTA+  ++EL  +L 
Sbjct: 181 GDWVDFCLGPHGPSTGRIG-VVKLLNVAGAYWRGDAKNAMLQRIYGTAFFDKKELDAHLA 239

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEIN 295
            LEE +KRDHR+L  ++ LF   E   G  FW   G  ++  L   MRR + K+ Y+E+ 
Sbjct: 240 KLEEVKKRDHRRLGPQLGLFTFHEYAPGAPFWLPAGTVLYNVLEDAMRRLVLKNGYQEVK 299

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADD----TIKDLRTFALKPMNCPGHVAVFNHG 351
           TP + ++ LW+ SGHW  YR NMF V  ++      ++D  +F+LKPMNCP H  ++   
Sbjct: 300 TPLLFNKRLWETSGHWGKYRENMFLVVDSESDPALALEDRCSFSLKPMNCPSHHLIYRMD 359

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI 411
            +SYRELPVR     +++RNE SGSL GL RVR F QDDAH++  +EQ+ +E L+I  L+
Sbjct: 360 KRSYRELPVRYFTTDALHRNEASGSLGGLTRVRQFEQDDAHIYLREEQVTDEVLRIFELM 419

Query: 412 ISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
             +Y  FG        STRPE+R+G DALWD AE +++  LD         +   +  G+
Sbjct: 420 KVVYGAFGL-GFEATFSTRPEQRIGDDALWDRAEALLRKSLDATG------LKWTLNPGD 472

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
           GAFYGPK + ++ D++GR WQ  TIQ+D+  P RF+  +V   +++  PV+IHRA++GS 
Sbjct: 473 GAFYGPKIDMLVTDSLGRRWQTCTIQLDYAAPERFDLTFVGEDNKEHRPVVIHRAIYGSF 532

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           ERFI I+ E++ G  P WL+P+QA V T++     +A+E A  L++    +E D  ++ +
Sbjct: 533 ERFIAILTEHYAGAFPAWLAPVQARVVTVSDRFDAWAREAAAALQARGWRVEVDGSSDKL 592

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
             KIR   + KIP  ++ G+KE   R +  RR G    + + L     ++ +E+  P
Sbjct: 593 GAKIRNAQLAKIPFTLVVGEKEVEARGVSPRRHGGEDLKTMPLETFAELMAREATAP 649


>gi|324993844|gb|EGC25763.1| threonine--tRNA ligase [Streptococcus sanguinis SK405]
 gi|324994835|gb|EGC26748.1| threonine--tRNA ligase [Streptococcus sanguinis SK678]
 gi|325687276|gb|EGD29298.1| threonine--tRNA ligase [Streptococcus sanguinis SK72]
 gi|325696135|gb|EGD38026.1| threonine--tRNA ligase [Streptococcus sanguinis SK160]
 gi|327474719|gb|EGF20124.1| threonine--tRNA ligase [Streptococcus sanguinis SK408]
          Length = 647

 Score =  524 bits (1350), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 260/640 (40%), Positives = 409/640 (63%), Gaps = 23/640 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  + E G+IEI+T
Sbjct: 2   IKITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGTIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQI 122
           P+   +L ++RHS AH+ A+A + ++P++ + +GP I+DGFYYD D E    S+++L +I
Sbjct: 62  PDHEDALDILRHSAAHLFAQAARRLFPDIHLGVGPAIQDGFYYDTDNEAGQISNEDLPRI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWFD 181
           E++M++I+  + P +++ ++ ++ARE+F  K + YK+E++E     E  +T+YRQGE+ D
Sbjct: 122 EEEMKKIVKENFPSIREEVTKDEAREIF--KNDPYKLELIEEHSEDEGGLTIYRQGEYVD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++  F L+ VAGAYWRG+S+  M+ R+YGTAW  +++L +YL   EE+
Sbjct: 180 LCRGPHVPSTGRIQ-IFHLLNVAGAYWRGNSDNAMMQRVYGTAWFDKKDLKKYLQMREEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+++ G G+ FW   G  + + L  Y+  +++   Y+ + TP +
Sbjct: 239 KERDHRKLGKELDLFMISQEVGQGLPFWLPNGATVRRELERYIVDKELASGYQHVYTPPL 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHW+ Y+ +MF        + D   F L+PMNCP H+ V+ H + SYRELP
Sbjct: 299 ASVELYKTSGHWEHYQEDMFPTM----DMGDGEEFVLRPMNCPHHIQVYKHHVHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y DF 
Sbjct: 355 IRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYADFN 414

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
             +   +LS R      K   +D +W++A+ +++  LD +       ++     GE AFY
Sbjct: 415 LTEYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G +    TIQ+DF LP RF+  YV +  E+  PVMIHR V  ++ERF 
Sbjct: 469 GPKLDIQVKTALGNEETLSTIQLDFLLPERFDLKYVGADGEEHRPVMIHRGVISTMERFT 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IEN+KG  P WL+P Q  +  +++ A ++YA ++A  L+   +  + D RNE + YK
Sbjct: 529 AILIENYKGAFPTWLAPHQVTLIPVSNEAHIDYAWQVAKKLRDKGVRADVDERNEKMQYK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           IR     KIP  +I GDKEA + ++ +RR+G   T  + +
Sbjct: 589 IRASQTSKIPYQLIVGDKEAEDGTVNVRRYGQKETHTIPV 628


>gi|327402300|ref|YP_004343138.1| Ser-tRNA(Thr) hydrolase [Fluviicola taffensis DSM 16823]
 gi|327317808|gb|AEA42300.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Fluviicola
           taffensis DSM 16823]
          Length = 647

 Score =  524 bits (1350), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 264/651 (40%), Positives = 415/651 (63%), Gaps = 22/651 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I +T PDGS++ +   AT  DVA SIS  LA+  +A  +N  V D + P+  + +++++T
Sbjct: 2   INITLPDGSVRQYEAGATALDVALSISEGLARNVLAAKVNNVVIDANIPLTNDCTLQLLT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQI 122
             D    + + HS AH+MAEA++  +P +++AIGP I +G+YYD D  +QPF  ++L +I
Sbjct: 62  WNDSEGKSTMWHSSAHLMAEALEFYYPGIKLAIGPPIANGYYYDVDFMDQPFKEEDLEKI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E+KM+E+    +P++++ +S   A   F  K++ YK+E+++ +P   ++T Y QG + DL
Sbjct: 122 EQKMKELAKLKNPYVRKEVSKADALAYFTEKEDPYKLELIQDLPDG-SITFYTQGNFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+  TG +K   KLM +AGAYWRGD     L+R+YG  +  Q ELT+YL  +EE++
Sbjct: 181 CRGPHIPDTGFIKAV-KLMSIAGAYWRGDEKNKQLTRVYGITFPKQAELTEYLERVEEAK 239

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           +RDHRK+ +E++LF  ++  G G+  W  KG  + + L +++++ + K  YE++ TP + 
Sbjct: 240 RRDHRKVGKELELFTFSQKVGQGLPLWLPKGAALRERLENFLKKAQRKAGYEQVITPHIG 299

Query: 301 DQHLWQQSGHWDSYRANMF-AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           ++ L+  SGH++ Y A+ F A+K  D        F LKPMNCP H  ++    +SY++LP
Sbjct: 300 NKELYVTSGHYEKYGADSFQAIKTPDPD----EEFLLKPMNCPHHCEIYKSKPRSYKDLP 355

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
            R AEFG+VYR E SG LHGL RVRGFTQDDAH+FCT++Q+  E  K+ +L++ I+K   
Sbjct: 356 ARFAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCTQDQVKEEFKKVIDLVLYIFKTLD 415

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           F+    ++S R    P K +GSD  W+      K     I+ +++  + T V LGE AFY
Sbjct: 416 FQNFKAQISLRDPENPSKYIGSDENWE------KAESAIIEAAAEKNLPTVVELGEAAFY 469

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +++++DA+GR+WQ GTIQVD+NLP RF   Y  + ++K  PVMIHRA FGS+ERF+
Sbjct: 470 GPKLDFMVQDALGREWQLGTIQVDYNLPERFELEYTGADNQKHRPVMIHRAPFGSMERFV 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            +++E+  G+ PLWL+  Q  +  I+    EYA+++  LL +  +    D RNE I  KI
Sbjct: 530 AVLLEHCGGDFPLWLATDQVAILPISDKYNEYAKDVLELLNNSDIRGFVDDRNEKIGKKI 589

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           RE  +KKIP +++ G+KEA E+ + +R+ G      +S +DA   +  +++
Sbjct: 590 REAELKKIPFMLVVGEKEAEEKQVSVRQRGEGDKGSMS-IDAFAAIVNQAI 639


>gi|332830447|gb|EGK03075.1| threonyl-tRNA synthetase [Dysgonomonas gadei ATCC BAA-286]
          Length = 650

 Score =  524 bits (1349), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 267/629 (42%), Positives = 396/629 (62%), Gaps = 19/629 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+TFPDGS++ F    T   +AESIS  LA+  +A  +NG+V DL+ P+ E  +IE++ 
Sbjct: 2   IKITFPDGSVREFAKGTTSMQIAESISSRLAQDVLAAKVNGQVWDLTRPIDEDATIELLK 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQI 122
            ED        HS AH+MAEA+Q ++P  +  IGP IE+GFYYD D  + P    + A+I
Sbjct: 62  WEDEDGKHAYWHSSAHLMAEAIQILYPHAKFGIGPAIENGFYYDIDFGDTPVKDADFAKI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E KM E+IA      +Q ++   A ++F+++ E YKVE++  +     +T Y QG + DL
Sbjct: 122 EAKMMELIANKEEIKRQNITKSDAIKMFDARHENYKVELINDL-EDGTITTYTQGVFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ +T  +K   K++  AGAYWRGD  R  L+R+YG  +  ++ L +YL  LEE++
Sbjct: 181 CRGPHLPNTSYIKAV-KILSAAGAYWRGDEKRKQLTRLYGITFPKKKMLDEYLIMLEEAK 239

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           KRDHRK+ +E++LF  +E+ G G+  W  +G ++   L  ++++ + K DY+++ TP + 
Sbjct: 240 KRDHRKIGKELELFAFSENVGKGLPLWLPRGTQLRLKLEDFLKKIQRKFDYQQVMTPHIG 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            + L+  SGH++ Y  + F       T ++   F LKPMNCP H  ++    +SY++LP+
Sbjct: 300 SKILYVTSGHYEKYGKDSFQ---PIHTPEEGEEFLLKPMNCPHHCEIYKIIPRSYKDLPL 356

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLAEFG+VYR E SG LHGL RVRGFTQDDAH+FCT EQ+  E LK+ +++  I+K   F
Sbjct: 357 RLAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCTPEQLKAEFLKVMDIVFIIFKALDF 416

Query: 421 EKIMVKLSTR-PEKR---VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           E    ++S R PE R   +GSD  W+ AE  +      I+   +  +   V LGE AFYG
Sbjct: 417 ENFEAQISLRDPENREKYIGSDENWEKAERAI------IEACEEKGLPAKVELGEAAFYG 470

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK ++++KDA+GR WQ GTIQVD+NLP RF   Y  + ++K  PVMIHRA FGS+ERFI 
Sbjct: 471 PKLDFMVKDALGRRWQLGTIQVDYNLPERFELEYTGADNQKHRPVMIHRAPFGSMERFIA 530

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           ++IE+  G  PLWL+P Q ++  I+    +YA  + +  K   +S + D RNE I  KIR
Sbjct: 531 VLIEHTAGKFPLWLAPDQVVILPISEKFNDYAHRVNSYFKQQGISSQVDDRNEKIGRKIR 590

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFG 625
           ++ +K+IP ++I G+KEA    + +R+ G
Sbjct: 591 DNELKRIPYLLIVGEKEAETEEVSVRKQG 619


>gi|317153730|ref|YP_004121778.1| threonyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
 gi|316943981|gb|ADU63032.1| threonyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
          Length = 645

 Score =  524 bits (1349), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 269/636 (42%), Positives = 389/636 (61%), Gaps = 23/636 (3%)

Query: 21  ATGSDVAESISRSLAKK----AVAVAINGKVCDLSDPVREG--SIEIITPEDPRSLAVIR 74
           A G+  A+++ + ++KK     VA      V DL+ PV +   +IE +  E    L +IR
Sbjct: 13  AEGASCADALQQGVSKKQFKNVVAARCGEAVLDLTTPVPQTCTTIEPVFAESEEGLHIIR 72

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDS 134
           HS AH+MAEAV+ ++P  +V IGP I+DGFYYDFD E+ F+ ++L  IEK+M   +  + 
Sbjct: 73  HSTAHLMAEAVKKLFPAAKVTIGPAIKDGFYYDFDFERSFTPEDLEAIEKEMLSSVGANK 132

Query: 135 PFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQV 194
            F    +S ++AR  F++  E YK E+++ + A +  T+Y  G + DLCRGPHV  TG +
Sbjct: 133 DFSCTAMSADEARAYFDAMGETYKGELIDDLGA-DVYTVYTHGGFADLCRGPHVPRTGML 191

Query: 195 KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMD 254
           K F KL+ VAGAYWRG      L RIYGTAW+  + L ++L  LEE+ KRDHRKL  ++D
Sbjct: 192 KAF-KLLSVAGAYWRGSEKNKQLQRIYGTAWSDPKALKKHLDRLEEARKRDHRKLGVQLD 250

Query: 255 LFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWD 312
           LF   ED G G+I WH KG  I   L  + R++ +K  Y+ +  P +L + LW++SGH+D
Sbjct: 251 LFSTHEDVGGGMILWHPKGGLIRTILEDFERKEHLKRGYQIVQGPLILKRELWEKSGHYD 310

Query: 313 SYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE 372
           +YR NM+  +       D +++ +KPMNC  H+ +F   ++SYR+LP R  E G V+R+E
Sbjct: 311 NYRENMYFTEI------DEQSYGIKPMNCLSHMLIFKRKIQSYRDLPQRYFELGVVHRHE 364

Query: 373 PSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
            SG LHGLMRVR FTQDDAH+ C  +Q+  E + + N +  I   FGFE    ++STRPE
Sbjct: 365 KSGVLHGLMRVRSFTQDDAHLICRPDQLQTEIIGVFNFVRDIMGLFGFE-FEAEISTRPE 423

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
           K VG+DA W+ A   +K  LD +           V  G+GAFYGPK + IL+D++ R WQ
Sbjct: 424 KSVGTDADWELATAALKDALDALGKPYT------VNEGDGAFYGPKIDIILRDSLDRRWQ 477

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
           C TIQ DF LP RF+  YV    E+  PVM+HR + GSIERFIG++IE+F G LP+WL+P
Sbjct: 478 CATIQCDFTLPDRFDLVYVGEDGERHRPVMLHRVILGSIERFIGVLIEHFAGALPVWLAP 537

Query: 553 IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
           +QA +  +T +  E+ ++    L    + +E D RNE + YK+RE  ++KIP +++ GDK
Sbjct: 538 VQARLLNVTDAQGEFTEKARAYLAGRGIRVEADTRNEKLGYKVREAQVEKIPYMLVVGDK 597

Query: 613 EASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
           E     + IR         V+L +A  ++   +  P
Sbjct: 598 EVEAGCVNIRSRDGDDPGLVTLEEAAQLILDAAQAP 633


>gi|46204424|ref|ZP_00050025.2| COG0441: Threonyl-tRNA synthetase [Magnetospirillum magnetotacticum
           MS-1]
          Length = 394

 Score =  523 bits (1348), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 233/387 (60%), Positives = 304/387 (78%)

Query: 266 IFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD 325
           +FWH +GW +FQ LI+YMRR++K DY E+N PQ+LD+ LW+ SGHW  YR NMFA + A 
Sbjct: 1   MFWHAQGWTVFQELIAYMRRRLKGDYAEVNAPQILDKSLWETSGHWGWYRENMFAAQSAG 60

Query: 326 DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRG 385
           +  +D R FALKPMNCPGHV +F HGLKSYR+LP+R+AEFG V+R EPSG++HGLMRVRG
Sbjct: 61  EEAEDKRWFALKPMNCPGHVQIFKHGLKSYRDLPLRMAEFGVVHRYEPSGAMHGLMRVRG 120

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
           FTQDDAH+FCT++Q+ +ECLKI++LI+S Y DFGF++I+VKLSTRPEKRVGSDALWD AE
Sbjct: 121 FTQDDAHIFCTEDQLADECLKINDLILSTYADFGFDEILVKLSTRPEKRVGSDALWDHAE 180

Query: 446 NIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSR 505
            +M  VL  I+  S  RI T V  GEGAFYGPKFEY+L+DAIGRDWQCGT QVDFNLP R
Sbjct: 181 AVMTRVLAQIEEQSGGRIKTAVNPGEGAFYGPKFEYVLRDAIGRDWQCGTTQVDFNLPER 240

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAV 565
           F A Y+++ S+K  PVM+HRA+ GS+ERF GI+IE+F G+ PLWL+P+Q +V TITS A 
Sbjct: 241 FGATYIDADSQKKPPVMVHRAICGSMERFTGILIEHFAGHFPLWLAPLQIVVATITSEAD 300

Query: 566 EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
           +YA+E+  +L+   L +E D RNE INYK+REHS+ K+P+++  G +EA ER++ +RR G
Sbjct: 301 DYAREVVRVLERAGLRVEADLRNEKINYKVREHSLAKVPVLLALGRREAEERTVSVRRLG 360

Query: 626 STTTQKVSLLDAIPILTKESLPPDCQK 652
           S  T  ++L  A+    +E+  PD ++
Sbjct: 361 SQKTTTLALDAALAAFVEEATSPDRRR 387


>gi|332362439|gb|EGJ40239.1| threonine--tRNA ligase [Streptococcus sanguinis SK1056]
          Length = 654

 Score =  523 bits (1348), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 260/640 (40%), Positives = 408/640 (63%), Gaps = 23/640 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  + E GSIEI+T
Sbjct: 9   IKITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGSIEIVT 68

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQI 122
           P+   +L ++RHS AH+ A+A + ++P++ + +GP I+DGFYYD D E    S+++L +I
Sbjct: 69  PDHEDALDILRHSAAHLFAQAARRLFPDIHLGVGPAIQDGFYYDTDNEAGQISNEDLPRI 128

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWFD 181
           E++M++I+  + P +++ ++ ++ARE+F  K + YK+E++E     E  +T+YRQGE+ D
Sbjct: 129 EEEMKKIVKENFPSIREEVTKDEAREIF--KNDPYKLELIEEHSEDEGGLTIYRQGEYVD 186

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++  F L+ VAGAYWRG+S+  M+ R+YGTAW  +++L +YL   EE+
Sbjct: 187 LCRGPHVPSTGRIQ-IFHLLNVAGAYWRGNSDNAMMQRVYGTAWFDKKDLKKYLQMREEA 245

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+++ G G+ FW   G  + + L  Y+  +++   Y+ + TP +
Sbjct: 246 KERDHRKLGKELDLFMISQEVGQGLPFWLPNGATVRRELERYIVDKELASGYQHVYTPPL 305

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHW+ Y+ +MF        + D   F L+PMNCP H+ V+ H + SYRELP
Sbjct: 306 ASVELYKTSGHWEHYQEDMFPTM----DMGDGEEFVLRPMNCPHHIQVYKHHVHSYRELP 361

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y DF 
Sbjct: 362 IRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYADFN 421

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
             +   +LS R      K   +D +W++A+ +++  LD +       ++     GE AFY
Sbjct: 422 LTEYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAFY 475

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G +    TIQ+DF LP RF+  YV +  E+  PVMIHR V  ++ERF 
Sbjct: 476 GPKLDIQVKTALGNEETLSTIQLDFLLPERFDLKYVGADGEEHRPVMIHRGVISTMERFT 535

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IEN+KG  P WL+P Q  +  +++ A ++YA ++A  L+   +  + D RNE + YK
Sbjct: 536 AILIENYKGAFPTWLAPHQVTLIPVSNEAHIDYAWQVAKKLRDKGVRADVDERNEKMQYK 595

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           IR     KIP  +I GDKE  + ++ +RR+G   T  + +
Sbjct: 596 IRASQTSKIPYQLIVGDKEVEDGTVNVRRYGQKETHTIPV 635


>gi|329928815|ref|ZP_08282654.1| threonine--tRNA ligase [Paenibacillus sp. HGF5]
 gi|328937458|gb|EGG33879.1| threonine--tRNA ligase [Paenibacillus sp. HGF5]
          Length = 645

 Score =  523 bits (1348), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 258/632 (40%), Positives = 403/632 (63%), Gaps = 25/632 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           I +  PDGS++ +   +   DVA SIS  L K AVA  ++G V DLS P+++G+ IEI+T
Sbjct: 3   ISIKLPDGSVREYEAGSNIEDVAASISSGLRKNAVAGKMDGIVVDLSTPLQDGALIEIVT 62

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIW--PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
            + P  L V+RHS AH++A+A + ++   EV++ +GP+IEDGFYYD D E+P + ++L +
Sbjct: 63  QDTPEGLEVMRHSTAHLLAQATKRLYGQKEVKLGVGPVIEDGFYYDMDLEEPLNPEDLQK 122

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK+M+ II  + P +++ +S  +A  +F    + YK+E++ ++P    +T+Y QGE+FD
Sbjct: 123 IEKEMERIIGENLPIVRKEVSRAEALRIFGELGDPYKLELINALPEDSIITIYEQGEFFD 182

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG++K  FKLM VAGAYWRGDS   ML R+YGTA+  + +L ++L  LEE+
Sbjct: 183 LCRGPHVPSTGKIK-VFKLMNVAGAYWRGDSKNKMLQRVYGTAFVKKAQLDEHLRLLEEA 241

Query: 242 EKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISY---MRRKIKDDYEEINTP 297
           +KRDHRKL +E+ +F  ++  G G+  W   G K+ +TL  Y   M  ++   Y+ + TP
Sbjct: 242 KKRDHRKLGKELQMFTFSQLVGQGLPIWLPNGAKLRRTLERYIVDMEERL--GYQHVYTP 299

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  L++ SGHW+ Y+ +MF     D+         L+PMNCP H+ V+   + SYR+
Sbjct: 300 VLGNVELYKTSGHWEHYQEDMFPKMEMDN-----EELVLRPMNCPHHMMVYKSDMHSYRD 354

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AE G  +R E SG+L GL RVR  T +D+H+FC  +Q+  E  ++  LI+++YKD
Sbjct: 355 LPIRIAELGMQHRYEMSGALTGLHRVRAMTLNDSHIFCRPDQIKEEFARVIQLIMTVYKD 414

Query: 418 FGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           FG      +LS R     EK   +D +W+ ++ +++ V++++     +        GE A
Sbjct: 415 FGIHDYRFRLSYRDPQDTEKYFQNDEMWEMSQRMLREVVESLDMPFYE------AEGEAA 468

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  ++ A+G++    T+Q+DF LP RF   YV    +K  PV+IHR + G++ER
Sbjct: 469 FYGPKLDVQIRTALGKEETLSTVQLDFLLPERFELEYVGDDGQKHRPVVIHRGILGTMER 528

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           F   ++ENF G LPLWLSP+Q  V  ++++  +YA+E+A  L+   +S+E D RNE + Y
Sbjct: 529 FTAFLLENFAGALPLWLSPVQVKVIPVSNAFEDYAKEVAEKLQFAGISVEPDLRNEKLGY 588

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
           KIRE  ++KIP + I G+ E S  ++ +R+ G
Sbjct: 589 KIREAQLEKIPYMFIVGENEKSAGAVSVRKRG 620


>gi|148909063|gb|ABR17634.1| unknown [Picea sitchensis]
          Length = 682

 Score =  523 bits (1348), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 264/583 (45%), Positives = 378/583 (64%), Gaps = 23/583 (3%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           I + T E  ++L  IRH+ AH++A AVQ ++P+ +V IGP IE GFYYDFD  QP +  +
Sbjct: 100 IVLPTNETSKTLLCIRHTSAHVLAMAVQKVFPDAKVTIGPWIERGFYYDFDI-QPLTDKD 158

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG- 177
           L +I+K+M  II R+ P +++ +S E+A     +  E YK+EIL+SI + E +T+Y  G 
Sbjct: 159 LKKIKKEMDRIIRRNLPLIREEVSREEAERRIRAINEPYKLEILDSIKS-EPITIYHIGD 217

Query: 178 EWFDLCRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           EW+DLC GPHV STG + KK  +L  VAGAYWRGD  R ML RIYGTAW  +++L  Y +
Sbjct: 218 EWWDLCAGPHVESTGLLNKKAIELESVAGAYWRGDEKRQMLQRIYGTAWENEEQLKTYQF 277

Query: 237 FLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEI 294
             EE+++RDHR+L +E+DLF I E+ G G++FWH +G  I Q +  + +R  I+  YE +
Sbjct: 278 LKEEAKRRDHRRLGQELDLFSIQEEAGGGLVFWHPRGAIIRQNIEDFWKRTHIQHGYELL 337

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
            TP V    LW+ SGH + Y+ NMF     +D +     + L+PMNCP H+ V+ H L+S
Sbjct: 338 YTPHVDKADLWKISGHLEFYKENMFNQMDIEDEL-----YQLRPMNCPYHILVYKHSLRS 392

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YR+LP ++AE G+VYR E SGSLHGL RVRGFTQDDAH+FC   Q+ +E   + +L  +I
Sbjct: 393 YRDLPFKVAELGTVYRYEMSGSLHGLFRVRGFTQDDAHIFCLPSQIKDEIRGVLDLTEAI 452

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
              F F+   + LST+PEK VGSD +W+ A + +K   D +++   D     V  G GAF
Sbjct: 453 LSQFDFKNYEINLSTKPEKAVGSDVIWEKATSALK---DALEDKGWD---YSVDEGGGAF 506

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  ++DA+GR WQC T+QVDFNLP RF+ FY++S+SEK  P+MIHRA+ GS+ERF
Sbjct: 507 YGPKIDLKIEDALGRKWQCSTVQVDFNLPQRFDLFYIDSNSEKKRPIMIHRAILGSLERF 566

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
            GI+IEN+ G+ PLWLSP+QA +  +T + V Y Q++   +K   +  E  +  E ++  
Sbjct: 567 FGILIENYAGDFPLWLSPVQARILPVTDTQVPYCQKVVAKMKEKDIRAELSY-GERLSKL 625

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIR-----RFGSTTTQKV 632
           IR     KIP++ + G +E    ++ +R       G+ T  +V
Sbjct: 626 IRNSETHKIPLMAVVGPREVESGTLTVRTRHGGELGTMTIDEV 668


>gi|257869188|ref|ZP_05648841.1| threonyl-tRNA synthetase [Enterococcus gallinarum EG2]
 gi|257803352|gb|EEV32174.1| threonyl-tRNA synthetase [Enterococcus gallinarum EG2]
          Length = 646

 Score =  523 bits (1348), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 263/635 (41%), Positives = 404/635 (63%), Gaps = 23/635 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           + +TFPDG+ K F V  T  ++AE IS+SLAKKA+A  +NG++ DL   + E   IEI+T
Sbjct: 3   LTITFPDGAKKEFAVGITTKEIAEGISKSLAKKALAGKVNGQLIDLDRGIEEDAQIEIVT 62

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
           P+   +L ++RHS AH+MA+A++ ++P +   +GP I+ GFYYD D  E P ++++L  I
Sbjct: 63  PDHEDALGLVRHSAAHLMAQAMRRLYPNIHFGVGPAIDTGFYYDTDNGESPITAEDLPAI 122

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M +I+  + P  ++ LS ++A ELF   ++ YKVE++  +P  E +T Y+QGE+ DL
Sbjct: 123 EAEMMKIVKENLPIERRVLSKKEALELF--AEDPYKVELISELPEDETITAYQQGEFVDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG+++  FKL+ VAGAYWRG+SN  M+ R+YGTA+  ++EL +++   EE++
Sbjct: 181 CRGPHVPSTGRIQ-VFKLLSVAGAYWRGNSNNQMMQRVYGTAFFDKKELKEFIRLREEAK 239

Query: 243 KRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVL 300
           +RDHRKL +E+DLF ++ E G+G+ FW  KG  I +T+  Y+  +++   Y+ + TP + 
Sbjct: 240 ERDHRKLGKELDLFMLSPEVGAGLPFWLPKGATIRRTIERYIVDKEVSLGYQHVYTPIMA 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  L++ SGHWD Y  +MF        + D     L+PMNCP H+ V+ + + SYRELP+
Sbjct: 300 NVDLYKTSGHWDHYHEDMFPPM----DMGDGEMLVLRPMNCPHHMMVYKNDIHSYRELPI 355

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  +  +L++ +YKDF  
Sbjct: 356 RIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLDLMVEVYKDFNV 415

Query: 421 EKIMVKLSTR-PE---KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
                +LS R PE   K    DA+W++A+ ++K  +D +       ++     GE AFYG
Sbjct: 416 TDYRFRLSYRDPENKDKYFDDDAMWENAQTMLKAAMDELN------LDYFEAEGEAAFYG 469

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH-PVMIHRAVFGSIERFI 535
           PK +  +K A+G +    TIQ+DF LP RF+  YV    E  H PV+IHR +  ++ERF+
Sbjct: 470 PKLDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTMERFV 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
             + E +KG  P WL+PIQA +  ++  A  +YA EI   L+S  L +E D RNE + YK
Sbjct: 530 AYLTEVYKGAFPTWLAPIQATIIPVSVDAHSDYAYEIKERLQSQGLRVEVDDRNEKMGYK 589

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           IR   ++KIP  ++ GD+E  + ++ IRR+GS  T
Sbjct: 590 IRASQMQKIPYQLVVGDQEVKDATVNIRRYGSKET 624


>gi|55820651|ref|YP_139093.1| threonyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
 gi|55822542|ref|YP_140983.1| threonyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
 gi|116627458|ref|YP_820077.1| threonyl-tRNA synthetase [Streptococcus thermophilus LMD-9]
 gi|73919831|sp|Q5M0T3|SYT_STRT1 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|73919832|sp|Q5M5B9|SYT_STRT2 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|122267944|sp|Q03LP1|SYT_STRTD RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|55736636|gb|AAV60278.1| threonyl-tRNA synthetase 1 [Streptococcus thermophilus LMG 18311]
 gi|55738527|gb|AAV62168.1| threonyl-tRNA synthetase 1 [Streptococcus thermophilus CNRZ1066]
 gi|116100735|gb|ABJ65881.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Streptococcus
           thermophilus LMD-9]
 gi|312277977|gb|ADQ62634.1| Threonyl-tRNA synthetase ThrS [Streptococcus thermophilus ND03]
          Length = 648

 Score =  523 bits (1347), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 267/641 (41%), Positives = 408/641 (63%), Gaps = 25/641 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           I +TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  + E GSIEI+T
Sbjct: 2   INITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRVITEDGSIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQI 122
           P+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D +    S+++L +I
Sbjct: 62  PDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNQAGQISNEDLPRI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWFD 181
           E++M++I+  + P +++ ++ ++ARE+F  K + YK+E++E     +  +T+YRQGE+ D
Sbjct: 122 EEEMKKIVKENFPSIREEVTKDEAREIF--KNDPYKLELIEEHSEDDGGLTIYRQGEYVD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++  F L+ VAGAYWRG+S+  M+ RIYGTAW  +++L  YL  LEE+
Sbjct: 180 LCRGPHVPSTGRIQ-IFHLLNVAGAYWRGNSDNAMMQRIYGTAWFDKKDLKAYLKRLEEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+++ G G+ FW   G  I + L  Y+  +++   Y+ + TP +
Sbjct: 239 KERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVDKEVAAGYQHVYTPPI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHWD YR +MF        + D   F L+PMNCP H+ V+ H + SYRELP
Sbjct: 299 ASVELYKTSGHWDHYREDMFPPM----DMGDGEEFVLRPMNCPHHIEVYKHHVHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  + +D H F   EQ+  E  KI  LII +Y+DF 
Sbjct: 355 IRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHTFVAPEQIEEEFKKILQLIIDVYEDFN 414

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R      K   +D +W++A+ ++K  +D +       +      GE AFY
Sbjct: 415 LTDYRFRLSYRDPADKHKYFDNDEMWENAQRMLKAAVDDMG------VEYYEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G++    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF 
Sbjct: 469 GPKLDIQVKTALGKEETLSTIQLDFLLPERFDLHYIGADGEEHRPVMIHRGVISTMERFT 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IEN+KG  P WL+P Q  +  +++   V+YA E+A  L+   +  E D RNE + +K
Sbjct: 529 AILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAKKLRDRGVRAEVDERNEKMQFK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFG--STTTQKVS 633
           IR    +KIP  +I GDKE  + ++ +RR+G   T T+ VS
Sbjct: 589 IRASQTQKIPYQLIVGDKEMKDGTVNVRRYGQKQTHTETVS 629


>gi|327470637|gb|EGF16093.1| threonine--tRNA ligase [Streptococcus sanguinis SK330]
          Length = 645

 Score =  523 bits (1347), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 260/640 (40%), Positives = 408/640 (63%), Gaps = 23/640 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  + E G+IEI+T
Sbjct: 2   IKITFPDGAVREFESSVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGAIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQI 122
           P+   +L ++RHS AH+ A+A + ++P++ + +GP I+DGFYYD D E    S+++L +I
Sbjct: 62  PDHEDALDILRHSAAHLFAQAARRLFPDIHLGVGPAIQDGFYYDTDNEVGQISNEDLPRI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWFD 181
           E++M++I+  + P +++ ++ ++ARE+F  K + YK+E++E     E  +T+YRQGE+ D
Sbjct: 122 EEEMKKIVKENFPSIREEVTKDEAREIF--KNDPYKLELIEEHSEDEGGLTIYRQGEYVD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++  F L+ VAGAYWRG+S+  M+ RIYGTAW  +++L +YL   EE+
Sbjct: 180 LCRGPHVPSTGRIQ-IFHLLNVAGAYWRGNSDNAMMQRIYGTAWFDKKDLKKYLQMREEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+++ G G+ FW   G  + + L  Y+  +++   Y+ + TP +
Sbjct: 239 KERDHRKLGKELDLFMISQEVGQGLPFWLPNGATVRRELERYIVDKELASGYQHVYTPPL 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHW+ Y+ +MF        + D   F L+PMNCP H+ V+ H + SYRELP
Sbjct: 299 ASVELYKTSGHWEHYQEDMFPTM----DMGDGEEFVLRPMNCPHHIQVYKHHVHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y DF 
Sbjct: 355 IRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYADFN 414

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
             +   +LS R      K   +D +W++A+ +++  LD +       ++     GE AFY
Sbjct: 415 LTEYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G +    TIQ+DF LP RF+  YV +  E+  PVMIHR V  ++ERF 
Sbjct: 469 GPKLDIQVKTALGNEETLSTIQLDFLLPERFDLKYVGADGEEHRPVMIHRGVISTMERFT 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IEN+KG  P WL+P Q  +  +++ A ++YA ++A  L+   +  + D RNE + YK
Sbjct: 529 AILIENYKGAFPTWLAPHQVTLIPVSNEAHIDYAWQVAKKLRDKGVRADVDERNEKMQYK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           IR     KIP  +I GDKE  + ++ +RR+G   T  + +
Sbjct: 589 IRASQTSKIPYQLIVGDKEVEDSTVNVRRYGQKETHTIPV 628


>gi|242373974|ref|ZP_04819548.1| threonyl-tRNA synthetase 1 [Staphylococcus epidermidis M23864:W1]
 gi|242348328|gb|EES39930.1| threonyl-tRNA synthetase 1 [Staphylococcus epidermidis M23864:W1]
          Length = 654

 Score =  523 bits (1347), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 264/630 (41%), Positives = 401/630 (63%), Gaps = 21/630 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           I + FPDG+ K F    T  D+A+SIS  L KKAVA   NG++ DL+ P+ E GSIEI+T
Sbjct: 13  INIQFPDGNSKAFDKGTTTEDIAQSISPGLRKKAVAGKFNGQMVDLTRPLEEDGSIEIVT 72

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P    +L V+RHS AH+MA+A++ ++ +V+  +GP+IE GFYYDFD ++  SSD+  +IE
Sbjct: 73  PGSEEALEVLRHSTAHLMAQALKRLYGDVKFGVGPVIEGGFYYDFDMDEKVSSDDFDKIE 132

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K M++I+  +    ++ +S  +A+E F  K + YK+E++++IP  ENVTLY QGE+ DLC
Sbjct: 133 KTMKQIVNENYKIERKVVSRNEAKEFF--KDDPYKLELIDAIPEDENVTLYTQGEFTDLC 190

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RG HV ST ++K+F KL+  AGAYWRGDSN  ML RIYGTA+  +++L  +L  LEE  +
Sbjct: 191 RGVHVPSTSKIKEF-KLLSTAGAYWRGDSNNKMLQRIYGTAFFDKKDLKAHLQMLEERRE 249

Query: 244 RDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLD 301
           RDHRK+ ++++LF  ++  G+G+  W   G  I + +  Y+  +++   Y+ + TP + +
Sbjct: 250 RDHRKIGKDLELFTNSQLVGAGLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLAN 309

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             L++ SGHWD Y+ +MF     D+T        L+PMNCP H+ ++N+   SYRELP+R
Sbjct: 310 VDLYKTSGHWDHYQEDMFPPMKLDET----EEMVLRPMNCPHHMMIYNNKPHSYRELPIR 365

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AE G+++R E SG++ GL RVRG T +D+H+F   +Q+  E  ++ N+I  +Y+DFGFE
Sbjct: 366 IAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVNMIQEVYEDFGFE 425

Query: 422 KIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
               +LS R     EK +  D +W+ AE+++K  +D +     + I      GE AFYGP
Sbjct: 426 DYTFRLSYRDPEDKEKYMDDDEMWNKAESMLKEAVDEMGLPYVEAI------GEAAFYGP 479

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  +K A+G++    T Q+DF LP RF   Y+ S  E+  PV+IHR V  ++ERF+  
Sbjct: 480 KLDVQVKTAMGKEETLSTAQLDFLLPERFELTYIGSDGEQHRPVVIHRGVVSTMERFVAF 539

Query: 538 MIENFKGNLPLWLSPIQA-IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           + E  KG  P WL+P Q  I+        +YA+++ + LKS  + +E D RNE + YKIR
Sbjct: 540 LTEETKGAFPTWLAPKQVEIIPVNVDIHYDYARQLQDELKSQGVRVEIDDRNEKMGYKIR 599

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGS 626
           E  ++KIP  I+ GDKE     + +R++GS
Sbjct: 600 EAQMQKIPYQIVVGDKEVENNEVNVRKYGS 629


>gi|269792334|ref|YP_003317238.1| threonyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM
           6589]
 gi|269099969|gb|ACZ18956.1| threonyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM
           6589]
          Length = 631

 Score =  523 bits (1347), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 260/587 (44%), Positives = 374/587 (63%), Gaps = 17/587 (2%)

Query: 38  AVAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIG 97
            VA  ++G + DL   V  G +E +       L ++RHS +H+MA+AV  ++P  ++ IG
Sbjct: 34  VVAARVDGVLVDLGANVEGGQLEPVLGSSEEGLDILRHSASHLMAQAVMRLFPGAKLGIG 93

Query: 98  PIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAY 157
           P I+DGFYYD       + ++L +IE++M  I+  D P  +  +  ++A ELF S+ E +
Sbjct: 94  PSIKDGFYYDILFPSQVTDEDLPRIEEEMMRIVRDDLPVERLVMGRDEALELFRSRGEDF 153

Query: 158 KVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPML 217
           K+E++  I   + V+LYRQGE+ DLCRGPHV  TG +K   KL+ +AGAYWRGD    ML
Sbjct: 154 KLELISEI-QDDTVSLYRQGEFVDLCRGPHVPRTGMLKHV-KLLSLAGAYWRGDEKNVML 211

Query: 218 SRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQ 277
           +RIYGTA+   + L  YL  LEE+ +RDHRK+ REMDLF I  +G G  F+H KG  I  
Sbjct: 212 TRIYGTAFMDGESLGAYLNRLEEARQRDHRKIGREMDLFSIQPEGPGFPFFHPKGMVILN 271

Query: 278 TLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFAL 336
            L+ + +R+ K   Y EI TP +LD+ LW++SGHWD YR NM+     D      R FA+
Sbjct: 272 ELVDFWKREHKRRGYNEIRTPLILDRSLWERSGHWDHYRDNMYFTSIDD------RPFAI 325

Query: 337 KPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT 396
           KPMNCPG + VF    +SYR+LP+R++E G V+R+E SG LHGLMRVR FTQDDAH++CT
Sbjct: 326 KPMNCPGGILVFKSSTRSYRDLPLRMSELGVVHRHERSGVLHGLMRVRCFTQDDAHIYCT 385

Query: 397 KEQMFNECLKIHNLIISIYKD-FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTI 455
            +Q+ +E   + +L+  +Y   FGF    V+LSTRP+  +GS  LW+ AE  +K  L+  
Sbjct: 386 PDQVGDEIAGVIDLMKYVYSQVFGF-NYRVELSTRPDNYMGSLELWNLAEEKLKQTLEA- 443

Query: 456 KNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS 515
              +  +IN G    +GAFYGPK ++ L+D+IGR WQCGTIQ+DF +P +F+  YV +  
Sbjct: 444 -TGTDYKINPG----DGAFYGPKIDFHLEDSIGRTWQCGTIQLDFQMPEKFDVSYVGADG 498

Query: 516 EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLL 575
               PVMIHR VFGS+ERF+GI+IE++ G  P WL+P+Q  V  +     + ++++   L
Sbjct: 499 ADHRPVMIHRTVFGSLERFLGILIEHYAGAFPFWLAPVQVRVLPVKPEFEDRSRQVEAAL 558

Query: 576 KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           KS  + +E D R+E +  KIR+  + K+P +I+ G KEA    + +R
Sbjct: 559 KSWGVRVEVDVRDEKLGKKIRDAQLSKVPYMIVIGAKEAETGGVSVR 605


>gi|297583666|ref|YP_003699446.1| threonyl-tRNA synthetase [Bacillus selenitireducens MLS10]
 gi|297142123|gb|ADH98880.1| threonyl-tRNA synthetase [Bacillus selenitireducens MLS10]
          Length = 649

 Score =  523 bits (1347), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 258/641 (40%), Positives = 405/641 (63%), Gaps = 19/641 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSI 59
           M   +KLTFPDG++K F   +T  DVA+SIS  L K AVA  +NG+  DL  P+ E  +I
Sbjct: 1   MAEQVKLTFPDGNVKEFERGSTMEDVAQSISPGLKKNAVAGKVNGEPIDLRTPIEEDAAI 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EI+T +    L V+RHS AH+MA+AV+ ++ +V++ +GP+IE+GFYYD D E   + ++L
Sbjct: 61  EILTYDSKEGLEVLRHSTAHLMAQAVKRLFDDVKLGVGPVIEEGFYYDIDMEHKLTPEDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IEK+M++II  +    +  +  E+A   +E   +  K+E+LE IP  E +++Y QGE+
Sbjct: 121 PKIEKEMKKIIDENHEITRVEVPREEAVRRYEEIGDDLKLELLEDIPKGEQISIYEQGEF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRG HV  T ++KKF KL+ V GAYWRGDSN  ML RIYGTA+  Q+E+  YL  LE
Sbjct: 181 FDLCRGVHVPQTSKLKKF-KLLTVNGAYWRGDSNNKMLQRIYGTAFPKQKEVDDYLQLLE 239

Query: 240 ESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTP 297
           E ++RDHRKL +E+ +F +++  G G+  W  KG  + + +  Y+   + +  Y+ + TP
Sbjct: 240 ERKERDHRKLGKELGIFAVSQKVGQGLPLWLPKGATVRRQVERYIVDIEERLGYDHVYTP 299

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    L++ SGHWD Y+ +MF V   D+         L+PMNCP H+ ++ +   SYR 
Sbjct: 300 VLGSVDLYKTSGHWDHYQDDMFPVLQMDN-----EDLVLRPMNCPHHMMIYKNEKHSYRN 354

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AE G+++R+E SG+L GL RVR  T +DAH+FC  +Q+ +E +++  LI ++YKD
Sbjct: 355 LPLRIAELGTMHRHEMSGALAGLQRVRAMTLNDAHIFCRPDQLKDEFIRVVELIQAVYKD 414

Query: 418 FGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           F  +    +LS R     EK V +D +W+ A+ ++K  +D +     + I      GE A
Sbjct: 415 FQIKDYYFRLSYRDPEDKEKYVDNDEMWEKAQAMLKEAVDEM---GVEYIEAD---GEAA 468

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  +K A+G+D    T+Q+DF+LP+RF+  Y     +   PV+IHR V  ++ER
Sbjct: 469 FYGPKLDVQVKTALGKDETLSTVQLDFHLPNRFDLTYTGEDGKDHRPVVIHRGVVSTMER 528

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           F+  ++E +KG  P WL+P+QA +  +    ++Y +++ + LK   + +  D RNE + Y
Sbjct: 529 FVAFLLEEYKGAFPTWLAPVQAELIPVNDVHLDYVRQVEDELKRAGVRVHVDVRNEKLGY 588

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           KIRE  ++K+P +++ GD+E    S+ +RR+G   +++VSL
Sbjct: 589 KIREAQMQKVPYLLVLGDQERDNASVNVRRYGQKDSEEVSL 629


>gi|325279133|ref|YP_004251675.1| threonyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712]
 gi|324310942|gb|ADY31495.1| threonyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712]
          Length = 650

 Score =  523 bits (1347), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 267/649 (41%), Positives = 408/649 (62%), Gaps = 20/649 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           IK+ FPDG++K F    TG D+A  IS  LAK+ +++++NG++ DL+ P+  +  I++ T
Sbjct: 2   IKIKFPDGNVKEFESGVTGLDIARGISSKLAKEVLSISVNGEIWDLTRPITADAEIKLFT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQP--FSSDELAQ 121
            +D        HS AH+MAEA+Q ++P  +  IGP IE+GFYYD D  +    +  +L  
Sbjct: 62  WDDQEGKHAFWHSSAHLMAEALQQLYPNTKFGIGPAIENGFYYDIDPGEGVVLTDKDLET 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEKKM E+  +   + +  +S ++A E F S  E YKVE++  +   + +T YRQG + D
Sbjct: 122 IEKKMLELARQKEEYCRINVSKQEALEHFNSINETYKVELINDLEDGK-ITYYRQGSFTD 180

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+  T  +K   KL  +AGAYWRG+ +  ML+RIYG  +  Q+ L ++L  +EE+
Sbjct: 181 LCRGPHLPDTSYIKAI-KLTGLAGAYWRGNEHNKMLTRIYGITFPKQKMLDEWLVLMEEA 239

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           ++RDHRK+ +EM+LF  ++  G+G+  W  KG  +   L  ++R+ + K  Y+++ TP +
Sbjct: 240 KQRDHRKIGKEMELFTFSQAVGAGLPMWLPKGAMLRDRLEGFLRKVQKKYGYQQVITPHI 299

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            + +L++ SGH+  Y  + F V     T ++   F LKPMNCP H  ++    +SY++LP
Sbjct: 300 GNVNLYKTSGHYQKYGKDSFQVIT---TPQEGEEFMLKPMNCPHHCEIYKFKPRSYKDLP 356

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R AEFG+VYR E SG LHGL RVRGFTQDDAH+FCT +Q+  E  K+ ++I +I+K   
Sbjct: 357 LRFAEFGTVYRYEQSGELHGLTRVRGFTQDDAHLFCTPDQLKEEFKKVIDIIFTIFKALD 416

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           F+    ++S R     EK +G+D  W+ AE  +      I+ + +  + T V LGE AFY
Sbjct: 417 FKDFTAQVSLRDPKNTEKYIGTDENWEKAERAI------IEAAEEKGLKTTVELGEAAFY 470

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDAIGR WQ GTIQVD+NLP RF+  Y  + + K  PVMIHRA FGS+ERF+
Sbjct: 471 GPKLDFMVKDAIGRKWQLGTIQVDYNLPERFDLEYTGADNLKHRPVMIHRAPFGSMERFV 530

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE+  G  PLWL+P Q +V  I+    +YAQ++++LL +  +    D RNE I  KI
Sbjct: 531 AVLIEHTGGKFPLWLAPDQVVVMPISEKFNDYAQKLSDLLNNSDIRTVLDDRNEKIGRKI 590

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R++ +KKIP ++I G+ E +  ++ +RR G      +S+ D I  + +E
Sbjct: 591 RDNELKKIPYLLIVGENEMNNNTVSVRRQGQGDMGTMSVEDFISKINEE 639


>gi|15615703|ref|NP_244007.1| threonyl-tRNA synthetase 1 [Bacillus halodurans C-125]
 gi|20139931|sp|Q9K866|SYT_BACHD RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|10175763|dbj|BAB06860.1| threonyl-tRNA synthetase 1 [Bacillus halodurans C-125]
          Length = 645

 Score =  523 bits (1347), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 253/655 (38%), Positives = 417/655 (63%), Gaps = 22/655 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M   I +TFPDG++K FP   T +++A SIS  L KKA+A  ++G + DL+ P+ ++G+I
Sbjct: 1   MADMINITFPDGAVKEFPKGTTTAEIAGSISPGLKKKALAGMLDGTLLDLNTPIEQDGTI 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE--VQVAIGPIIEDGFYYDFDKEQPFSSD 117
            I+TPE   +L V+RHS AH+MA+A++ ++ +  V++ +GP+IE GFYYD D ++  + +
Sbjct: 61  TIVTPESDEALEVLRHSTAHVMAQALKRLFKDRNVKLGVGPVIEGGFYYDVDMDESLTPE 120

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +L +IEK+M++II  + P  +  +S E+A   +E   + YK+E++  +P  E +T+Y QG
Sbjct: 121 DLPKIEKEMKKIIGENLPIERVVVSREEALARYEEVGDPYKIELINDLPEDETITIYEQG 180

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           E+FDLCRG HV STG++K+ FKL+ +AGAYWRGDS+  ML RIYGTA+  + +L ++L  
Sbjct: 181 EFFDLCRGVHVPSTGKLKE-FKLLNLAGAYWRGDSSNKMLQRIYGTAFFKKADLDEHLRL 239

Query: 238 LEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEIN 295
           LEE+++RDHRKL +E+ +F +++  G G+  W  KG  I + +  Y+  ++ K  Y+ + 
Sbjct: 240 LEEAKERDHRKLGKELGIFALSQKVGQGLPLWLPKGATIRRIIERYIVDKEEKLGYQHVY 299

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP +    L++ SGHWD Y+ +MF     ++         L+PMNCP H+ V+   ++SY
Sbjct: 300 TPVLASSELYKTSGHWDHYKDDMFPTMEMEN-----EELVLRPMNCPHHMMVYKTEMRSY 354

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           R+LP+R+AE G ++R E SG++ GL RVRG T +DAH+FC  +Q+ +E +++  LI ++Y
Sbjct: 355 RQLPLRIAELGLMHRYEMSGAVSGLQRVRGMTLNDAHIFCRPDQIKDEFVRVVRLIQAVY 414

Query: 416 KDFGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
           +DFG +    +LS R     EK    D +W+ A+ ++K  +D ++      +      GE
Sbjct: 415 EDFGLKNYSFRLSYRDPEDKEKYFDDDNMWNKAQGMLKEAMDELE------LEYFEAEGE 468

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
            AFYGPK +  ++ A+G+D    T+Q+DF LP RF+  YV    +   PV++HR V  ++
Sbjct: 469 AAFYGPKLDVQVRTALGKDETLSTVQLDFLLPERFDLTYVGEDGQPHRPVVVHRGVVSTM 528

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNET 590
           ERF+  ++E +KG  P WL+P+Q  V  ++  A +EYA+ +   L+   + +E D R+E 
Sbjct: 529 ERFVAFLLEEYKGAFPTWLAPVQVQVIPVSPEAHLEYAKNVQETLQQAGIRVEIDERDEK 588

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           I YKIRE  ++KIP +++ GDKE     + +R++G   +  + L + +  + +E+
Sbjct: 589 IGYKIREAQMQKIPYMLVLGDKEVEANGVNVRKYGEKDSSSMGLDEFVRHVAREA 643


>gi|332358962|gb|EGJ36783.1| threonine--tRNA ligase [Streptococcus sanguinis SK49]
          Length = 647

 Score =  523 bits (1347), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 259/640 (40%), Positives = 409/640 (63%), Gaps = 23/640 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  + E G+IEI+T
Sbjct: 2   IKITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGAIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQI 122
           P+   +L ++RHS AH+ A+A + ++P++ + +GP I+DGFYYD D +    S+++L +I
Sbjct: 62  PDHEDALDILRHSAAHLFAQAARRLFPDIHLGVGPAIQDGFYYDTDNQAGQISNEDLPRI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWFD 181
           E++M++I+  + P +++ ++ ++ARE+F  K + YK+E++E     E  +T+YRQGE+ D
Sbjct: 122 EEEMKKIVKENFPSIREEVTKDEAREIF--KNDPYKLELIEEHSEDEGGLTIYRQGEYVD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++  F L+ VAGAYWRG+S+  M+ R+YGTAW  +++L +YL   EE+
Sbjct: 180 LCRGPHVPSTGRIQ-IFHLLNVAGAYWRGNSDNAMMQRVYGTAWFDKKDLKKYLQMREEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+++ G G+ FW   G  + + L  Y+  +++   Y+ + TP +
Sbjct: 239 KERDHRKLGKELDLFMISQEVGQGLPFWLPNGATVRRELERYIVDKELASGYQHVYTPPL 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHW+ Y+ +MF        + D   F L+PMNCP H+ V+ H + SYRELP
Sbjct: 299 ASVELYKTSGHWEHYQEDMFPTM----DMGDGEEFVLRPMNCPHHIQVYKHHVHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y DF 
Sbjct: 355 IRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYADFN 414

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
             +   +LS R      K   +D +W++A+ +++  LD +       ++     GE AFY
Sbjct: 415 LTEYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G +    TIQ+DF LP RF+  YV +  E+  PVMIHR V  ++ERF 
Sbjct: 469 GPKLDIQVKTALGNEETLSTIQLDFLLPERFDLKYVGADGEEHRPVMIHRGVISTMERFT 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IEN+KG  P WL+P Q  +  +++ A ++YA ++A  L+   +  + D RNE + YK
Sbjct: 529 AILIENYKGAFPTWLAPHQVTLIPVSNEAHIDYAWQVAKKLRDKGVRADVDERNEKMQYK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           IR     KIP  +I GDKE  + ++ +RR+G   T  +S+
Sbjct: 589 IRASQTSKIPYQLIVGDKEVEDGTVNVRRYGQKETHTISV 628


>gi|328946743|gb|EGG40881.1| threonine--tRNA ligase [Streptococcus sanguinis SK1087]
          Length = 647

 Score =  523 bits (1346), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 259/640 (40%), Positives = 408/640 (63%), Gaps = 23/640 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  + E G+IEI+T
Sbjct: 2   IKITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGAIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQI 122
           P+   +L ++RHS AH+ A+A + ++P++ + +GP I+DGFYYD D E    S+++L +I
Sbjct: 62  PDHEDALDILRHSAAHLFAQAARRLFPDIHLGVGPAIQDGFYYDTDNEAGQISNEDLPRI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWFD 181
           E++M++I+  + P +++ ++ ++ARE+F  K + YK+E++E     E  +T+YRQGE+ D
Sbjct: 122 EEEMKKIVKENVPSIREEVTKDEAREIF--KNDPYKLELIEEHSEDEGGLTIYRQGEYVD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++  F L+ VAGAYWRG+S+  M+ R+YGTAW  +++L +YL   EE+
Sbjct: 180 LCRGPHVPSTGRIQ-IFHLLNVAGAYWRGNSDNAMMQRVYGTAWFDKKDLKKYLQMREEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+++ G G+ FW   G  + + L  Y+  +++   Y+ + TP +
Sbjct: 239 KERDHRKLGKELDLFMISQEVGQGLPFWLPNGATVRRELERYIVDKELASGYQHVYTPPL 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHW+ Y+ +MF        + D   F L+PMNCP H+ V+ H + SYRELP
Sbjct: 299 ASVELYKTSGHWEHYQEDMFPTM----DMGDGEEFVLRPMNCPHHIQVYKHHVHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y DF 
Sbjct: 355 IRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYADFN 414

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
             +   +LS R      K   +D +W++A+ +++  LD +       ++     GE AFY
Sbjct: 415 LTEYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G +    TIQ+DF LP RF+  YV +  E+  PVMIHR V  ++ERF 
Sbjct: 469 GPKLDIQVKTALGNEETLSTIQLDFLLPERFDLKYVGADGEEHRPVMIHRGVISTMERFT 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IEN+KG  P WL+P Q  +  +++ A ++YA ++A  L+   +  + D RNE + YK
Sbjct: 529 AILIENYKGAFPTWLAPHQVTLIPVSNEAHIDYAWQVAKKLRDKGVRADVDERNEKMQYK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           IR     KIP  +I GDKE  + ++ +RR+G   T  + +
Sbjct: 589 IRASQTSKIPYQLIVGDKEVEDGTVNVRRYGQKETHTIPV 628


>gi|325690794|gb|EGD32795.1| threonine--tRNA ligase [Streptococcus sanguinis SK115]
          Length = 647

 Score =  523 bits (1346), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 259/640 (40%), Positives = 408/640 (63%), Gaps = 23/640 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  + E G+IEI+T
Sbjct: 2   IKITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGAIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQI 122
           P+   +L ++RHS AH+ A+A + ++P++ + +GP I+DGFYYD D E    S+++L +I
Sbjct: 62  PDHEDALDILRHSAAHLFAQAARRLFPDIHLGVGPAIQDGFYYDTDNEAGQISNEDLPRI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWFD 181
           E++M++I+  + P +++ ++ ++ARE+F  K + YK+E++E     E  +T+YRQGE+ D
Sbjct: 122 EEEMKKIVKENFPSIREEVTKDEAREIF--KNDPYKLELIEEHSEDEGGLTIYRQGEYVD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++  F L+ VAGAYWRG+S+  M+ R+YGTAW  +++L +YL   EE+
Sbjct: 180 LCRGPHVPSTGRIQ-IFHLLNVAGAYWRGNSDNAMMQRVYGTAWFDKKDLKKYLQMREEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+++ G G+ FW   G  + + L  Y+  +++   Y+ + TP +
Sbjct: 239 KERDHRKLGKELDLFMISQEVGQGLPFWLPNGATVRRELERYIVDKELASGYQHVYTPPL 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHW+ Y+ +MF        + D   F L+PMNCP H+ V+ H + SYRELP
Sbjct: 299 ASVELYKTSGHWEHYQEDMFPTM----DMGDGEEFVLRPMNCPHHIQVYKHHVHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y DF 
Sbjct: 355 IRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYADFN 414

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
             +   +LS R      K   +D +W++A+ +++  LD +       ++     GE AFY
Sbjct: 415 LTEYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMD------VDYFEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G +    TIQ+DF LP RF+  YV +  E+  PVMIHR V  ++ERF 
Sbjct: 469 GPKLDIQVKTALGNEETLSTIQLDFLLPERFDLKYVGADGEEHRPVMIHRGVISTMERFT 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IEN+KG  P WL+P Q  +  +++ A ++YA ++A  L+   +  + D RNE + YK
Sbjct: 529 AILIENYKGAFPTWLAPHQVTLIPVSNEAHIDYAWQVAKKLRDKGVRADVDERNEKMQYK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           IR     KIP  +I GDKE  + ++ +RR+G   T  + +
Sbjct: 589 IRASQTSKIPYQLIVGDKEVEDGTVNVRRYGQKETHTIPV 628


>gi|257885297|ref|ZP_05664950.1| threonyl-tRNA synthetase [Enterococcus faecium 1,231,501]
 gi|257821149|gb|EEV48283.1| threonyl-tRNA synthetase [Enterococcus faecium 1,231,501]
          Length = 645

 Score =  523 bits (1346), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 266/635 (41%), Positives = 405/635 (63%), Gaps = 24/635 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+TFPDG++K F    T   +AESIS+SLAKKA+A  +NGK+ DL+ P+ E  SIEIIT
Sbjct: 2   IKITFPDGAVKEFESGTTTLAIAESISKSLAKKALAGKVNGKLVDLTRPIEENASIEIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQI 122
           P+   +L ++RHS AH+MA+A++ ++P +   +GP I+ GFYYD D  Q   ++++L  I
Sbjct: 62  PDHEDALGLVRHSAAHLMAQAMRRLYPNIHFGVGPAIDSGFYYDTDNGQNQVTAEDLPAI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M +I+  + P  ++ LS ++A E+F S  + YKVE++  +P +E +T Y+QGE+ DL
Sbjct: 122 EAEMMKIVKENLPIERRVLSKQEALEIFAS--DPYKVELISELP-EEVITAYQQGEFIDL 178

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG+++  FKL+ VAGAYWRG+SN  M+ R+YGTA+  ++ L +Y+   EE++
Sbjct: 179 CRGPHVPSTGRIQ-VFKLLSVAGAYWRGNSNNQMMQRVYGTAFFDKKALKEYIRLREEAK 237

Query: 243 KRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVL 300
           +RDHRKL +E+DLF ++ E GSG+ FW  KG  I +T+  Y+  +++   Y+ + TP + 
Sbjct: 238 ERDHRKLGKELDLFMVSPEVGSGLPFWLPKGATIRRTIERYIVDKEVSLGYQHVYTPIMG 297

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D  L++ SGHWD Y+ +MF        + D     L+PMNCP H+ V+ + + SYRELP+
Sbjct: 298 DVELYKTSGHWDHYQEDMFPPM----DMGDGEMLVLRPMNCPHHMMVYKNTIHSYRELPI 353

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  +   L++++Y DF  
Sbjct: 354 RIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVAVYADFNI 413

Query: 421 EKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
                +LS R     +K    DA+W+ A+ ++K  +D ++      ++     GE AFYG
Sbjct: 414 TDYRFRLSYRDPNNTDKYFDDDAMWEKAQAMLKAAMDELE------LDYFEAEGEAAFYG 467

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH-PVMIHRAVFGSIERFI 535
           PK +  +K A+G +    TIQ+DF LP RF+  YV    E  H PV+IHR +  ++ERF+
Sbjct: 468 PKLDVQVKTALGTEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTMERFV 527

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
             + E +KG  P WL+PIQA +  ++  A  +YA EI   L++  L +E D RNE + YK
Sbjct: 528 AYLTEVYKGAFPTWLAPIQATIIPVSVDAHGDYAYEIKERLQTKGLRVEVDDRNEKMGYK 587

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           IR    +KIP  ++ GDKE  + ++ +RR+GS  T
Sbjct: 588 IRASQTQKIPYQLVVGDKELEDATVNVRRYGSKET 622


>gi|302339715|ref|YP_003804921.1| threonyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
 gi|301636900|gb|ADK82327.1| threonyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
          Length = 585

 Score =  522 bits (1345), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 258/568 (45%), Positives = 357/568 (62%), Gaps = 14/568 (2%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           L  IRHS AH+MAEAV  ++P  +VAIGP IE+GFYYDFD  +P ++D+L +I  KM++I
Sbjct: 12  LHRIRHSMAHVMAEAVVDLFPGTKVAIGPAIENGFYYDFDFPKPLANDDLEKISAKMKDI 71

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
           I    PF ++ +S E+A +LF  K E YKVE+L++IP  E V+LY Q  + DLCRGPHV 
Sbjct: 72  IKGKHPFQRKVISREEAEKLFSGKGEQYKVELLKAIPEGEEVSLYSQDSFTDLCRGPHVE 131

Query: 190 STGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRK 248
           +T  +  + FKL+ +AGAYWRG    PML+RIYGTAW   +EL  YL  LEE EKRDHRK
Sbjct: 132 NTADLNAEAFKLLSIAGAYWRGKETNPMLTRIYGTAWENPKELRLYLKHLEEMEKRDHRK 191

Query: 249 LAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQ 306
           L RE+DLF + E+ G G+++WH KG +I   + ++ +    K+ YE + TP V    LW+
Sbjct: 192 LGRELDLFSLHEEAGPGLVYWHPKGARIRHQIETFWKDEHFKNGYELLYTPHVGKSWLWE 251

Query: 307 QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFG 366
            SGH D Y   M+      + + D   +  KPMNCP H+ ++     SYRELP R AE G
Sbjct: 252 TSGHLDFYAEGMYP-----EMVMDKANYYAKPMNCPFHIMIYKTNKHSYRELPFRWAELG 306

Query: 367 SVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK 426
           +VYR E SG+LHGLMRVRGFTQDDAH+FCT EQ+ +E L++    + + + FGF  I   
Sbjct: 307 TVYRYEKSGTLHGLMRVRGFTQDDAHIFCTPEQVEDEILEVLRFSLHMLRAFGFSDIQAY 366

Query: 427 LSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDA 486
           LSTRPEK VG    W  AE  ++  ++       + +   V  G GAFYGPK +  +KDA
Sbjct: 367 LSTRPEKAVGDPEQWKLAEASLQKAIEA------EGLAYEVDEGGGAFYGPKIDLKVKDA 420

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNL 546
           +GR WQ  T+Q DFN P RF   +V+   ++  P M+HRA+ GSIERF G++IE++ G  
Sbjct: 421 LGRSWQLSTVQFDFNEPKRFGMTFVDHDGKEKQPYMVHRALLGSIERFFGVLIEHYGGAF 480

Query: 547 PLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPII 606
           P+WLSP+Q  V  +  +   YA+ +   L+ H L  + D  +  +N KIR    +KIP +
Sbjct: 481 PVWLSPVQVQVIPVAPAFEAYAKSVETELRRHDLRADVDLSDSRMNAKIRNAQKEKIPYM 540

Query: 607 IICGDKEASERSIGIRRFGSTTTQKVSL 634
           +I G+KE   RS+ +R+        ++L
Sbjct: 541 LILGEKEQESRSVSVRKRNGEQVNGLAL 568


>gi|332885366|gb|EGK05615.1| threonyl-tRNA synthetase [Dysgonomonas mossii DSM 22836]
          Length = 650

 Score =  522 bits (1345), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 269/648 (41%), Positives = 399/648 (61%), Gaps = 19/648 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           IK+TFPDGS++ F    T   VAESIS  LA+  +A  +NG+V DL+ P+  + +IE++ 
Sbjct: 2   IKITFPDGSVREFEKGTTSMQVAESISSRLAQDVLAAKVNGEVWDLTRPIDTDATIELLK 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQI 122
            ED        HS AH+MAEAVQ ++P  +  IGP IE+GFYYD D  + P    +  +I
Sbjct: 62  WEDEDGKHAYWHSSAHLMAEAVQILYPHAKFGIGPAIENGFYYDIDFGDTPVKDADFHKI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E KM E+IA      +Q ++   A ++F  + E YKVE++  +     +T Y QG + DL
Sbjct: 122 EAKMMELIANKEEIKRQSITKTDALKMFGDRNEGYKVELINDL-EDGTITTYTQGVFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ +T  +K   K++  AGAYWRGD  R  L+R+YG  +  ++ L +YL  LEE++
Sbjct: 181 CRGPHLPNTSYIKAV-KILSAAGAYWRGDEKRKQLTRLYGITFPKKKMLDEYLVMLEEAK 239

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           KRDHRK+ +E++LF  +E+ G G+  W  +G ++   L  ++++ + K +Y+++ TP + 
Sbjct: 240 KRDHRKIGKELELFAFSENVGKGLPLWLPRGTQLRLKLEDFLKKIQKKFEYQQVMTPHIG 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            + L+  SGH+  Y  + F       T ++   F LKPMNCP H  ++    +SYR+LP+
Sbjct: 300 SKLLYVTSGHYAKYGQDSFQ---PIHTPEEGEEFLLKPMNCPHHCEIYKIVPRSYRDLPL 356

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AEFG+VYR E SG LHGL RVRGFTQDDAH+FCT EQ+  E LK+ +++  I+K   F
Sbjct: 357 RMAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCTPEQLKEEFLKVMDIVFIIFKALNF 416

Query: 421 EKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           E    ++S R     EK +GSDA W+ AE  +      I+   +  +   V LGE AFYG
Sbjct: 417 ENFEAQISLRDPNNREKYIGSDANWEKAERAI------IEACEEKGLPARVELGEAAFYG 470

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK ++++KDA+GR WQ GTIQVD+NLP RF   Y  + ++K  PVMIHRA FGS+ERFI 
Sbjct: 471 PKLDFMVKDALGRRWQLGTIQVDYNLPERFELEYTGADNQKHRPVMIHRAPFGSMERFIA 530

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           ++IE+  G  PLWL+P Q ++  I+    +YA  +++  K   +S + D RNE I  KIR
Sbjct: 531 VLIEHTAGKFPLWLAPDQVVILPISEKFNDYAHRVSHYFKQQGISSQVDDRNEKIGRKIR 590

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           ++ +K+IP ++I G+KEA    + IR+ G      +  ++    L +E
Sbjct: 591 DNELKRIPYLLIVGEKEAESEEVSIRKQGDGDKGSMKFVNFAAQLNEE 638


>gi|324991486|gb|EGC23419.1| threonine--tRNA ligase [Streptococcus sanguinis SK353]
          Length = 647

 Score =  522 bits (1345), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 260/640 (40%), Positives = 407/640 (63%), Gaps = 23/640 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  + E GSIEI+T
Sbjct: 2   IKITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGSIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQI 122
           P+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D      S+++L +I
Sbjct: 62  PDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNTAGQISNEDLPRI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWFD 181
           E++M++I+  + P +++ ++ ++ARE+F  K + YK+E++E     E  +T+YRQGE+ D
Sbjct: 122 EEEMKKIVKENFPSIREEVTKDEAREIF--KNDPYKLELIEEHSEDEGGLTIYRQGEYVD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++  F L+ VAGAYWRG+S+  M+ R+YGTAW  +++L +YL   EE+
Sbjct: 180 LCRGPHVPSTGRIQ-IFHLLNVAGAYWRGNSDNAMMQRVYGTAWFDKKDLKKYLQMREEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+++ G G+ FW   G  + + L  Y+  +++   Y+ + TP +
Sbjct: 239 KERDHRKLGKELDLFMISQEVGQGLPFWLPNGATVRRELERYIVDKELASGYQHVYTPPL 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHW+ Y+ +MF        + D   F L+PMNCP H+ V+ H + SYRELP
Sbjct: 299 ASVELYKTSGHWEHYQEDMFPTM----DMGDGEEFVLRPMNCPHHIQVYKHHVHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y DF 
Sbjct: 355 IRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYADFN 414

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
             +   +LS R      K   +D +W++A+ +++  LD +       ++     GE AFY
Sbjct: 415 LTEYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G +    TIQ+DF LP RF+  YV +  E+  PVMIHR V  ++ERF 
Sbjct: 469 GPKLDIQVKTALGNEETLSTIQLDFLLPERFDLKYVGADGEEHRPVMIHRGVISTMERFT 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IEN+KG  P WL+P Q  +  +++ A ++YA ++A  L+   +  + D RNE + YK
Sbjct: 529 AILIENYKGAFPTWLAPHQVTLIPVSNEAHIDYAWQVAKKLRDKGVRADVDERNEKMQYK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           IR     KIP  +I GDKE  + ++ +RR+G   T  + +
Sbjct: 589 IRASQTSKIPYQLIVGDKEVEDGTVNVRRYGQKETHTIPV 628


>gi|149371736|ref|ZP_01891152.1| threonine--tRNA ligase (threonine tRNA synthetase) [unidentified
           eubacterium SCB49]
 gi|149355363|gb|EDM43923.1| threonine--tRNA ligase (threonine tRNA synthetase) [unidentified
           eubacterium SCB49]
          Length = 647

 Score =  522 bits (1345), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 272/627 (43%), Positives = 392/627 (62%), Gaps = 19/627 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+T PDGSIK     +T  DVA SIS  LA+  ++   NG+  + +  + E G++ + T
Sbjct: 2   IKVTLPDGSIKEMENGSTVMDVAMSISEGLARNVLSATYNGETVETATTLTEDGNLVLFT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQI 122
             +        HS AHI+A+A++ ++P V++ IGP IE+GFYYD D    PF   +LA +
Sbjct: 62  WNNDEGKKAFWHSSAHILAQALEELYPGVKLTIGPAIENGFYYDVDFGNTPFVEKDLADV 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EKKM EI     PF  +  S   A + ++ +   YKVE++E++     +T      + DL
Sbjct: 122 EKKMLEIARGKHPFTLRATSKADALDFYKKQDNEYKVELIENL-EDGTITFCDHDSFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRG H+  TG VK   KLM +AGAYWRGD N   L+RIYG  +  Q+EL +YL  LEE++
Sbjct: 181 CRGGHLPHTGFVKAI-KLMSIAGAYWRGDENNKQLTRIYGITFPKQKELKEYLALLEEAK 239

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           KRDHRKL +E++LF  ++  G G+  W  KG  + + L +++++ + K  YE + TP + 
Sbjct: 240 KRDHRKLGKELELFTFSQKVGQGLPLWLPKGAALRERLENFLKKAQKKAGYEMVVTPHIG 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ L+  SGH+  Y  + F V    +T  D   F LKPMNCP H  ++N    SY++LP 
Sbjct: 300 NKELYVTSGHFAKYGEDSFQVI---NTPNDGEEFMLKPMNCPHHCEIYNAKPMSYKDLPK 356

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLAEFG+VYR E SG LHGL RVRGFTQDDAH+FCT +Q+  E  K+ +L++ ++   GF
Sbjct: 357 RLAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCTPDQLDEEFKKVIDLVLYVFGSLGF 416

Query: 421 EKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           EK   ++S R    PEK +G  + W+ AEN    +L+ +K+   D I   V  GE AFYG
Sbjct: 417 EKFTTQVSIRDMSKPEKYIGDVSTWEKAEN---AILNAVKDKGLDYI---VEEGEAAFYG 470

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK ++++KDA+GR WQ GTIQVD+NLP RF   Y  S +E   PVMIHRA FGS+ERF+ 
Sbjct: 471 PKLDFMVKDALGRSWQLGTIQVDYNLPERFELTYKGSDNELHRPVMIHRAPFGSLERFVA 530

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           I++E+  GN PLWL P Q  + +++    EYA+++ NLL++H +    D RNETI  KIR
Sbjct: 531 ILLEHTGGNFPLWLMPEQVAILSLSEKYEEYAEKVLNLLENHDIRALVDNRNETIGKKIR 590

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRR 623
           E  + KIP ++I G++E ++ +I +R+
Sbjct: 591 EAEMNKIPYMLILGEQEENDGTISVRK 617


>gi|239637520|ref|ZP_04678492.1| threonyl-tRNA synthetase [Staphylococcus warneri L37603]
 gi|239596738|gb|EEQ79263.1| threonyl-tRNA synthetase [Staphylococcus warneri L37603]
          Length = 645

 Score =  522 bits (1345), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 264/630 (41%), Positives = 399/630 (63%), Gaps = 21/630 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           I + FPDG+ K F    T  D+A+SIS  L KKAVA   NG++ DL+ P+ E G IEI+T
Sbjct: 4   INIQFPDGNSKAFDKGTTTEDIAQSISPGLRKKAVAGKFNGQMVDLTRPLEEDGEIEIVT 63

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P    +L V+RHS AH+MA+A++ ++ +V+  +GP+IE GFYYDFD ++  SSD+  +IE
Sbjct: 64  PGSDEALEVLRHSTAHLMAQALKRLYGDVKFGVGPVIEGGFYYDFDTDEKISSDDFEKIE 123

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K M++I+  +    ++ ++ ++A+  F  K + YK+E++++IP  ENVTLY QGE+ DLC
Sbjct: 124 KTMKKIVDENHKIERKVVTRDEAKAFF--KDDPYKLELIDAIPEDENVTLYSQGEFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RG HV ST ++K+F KL+  AGAYWRGDSN  ML RIYGTA+  +++L  +L  LEE ++
Sbjct: 182 RGVHVPSTSKIKEF-KLLSTAGAYWRGDSNNKMLQRIYGTAFFDKKDLKAHLEMLEERKE 240

Query: 244 RDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLD 301
           RDHRK+ ++++LF  ++  G+G+  W   G  I + +  Y+  +++   Y+ + TP + +
Sbjct: 241 RDHRKIGKDLELFANSQLVGAGLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLAN 300

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             L++ SGHWD Y+ +MF     D+T        L+PMNCP H+ ++N+   SYRELP+R
Sbjct: 301 VDLYKTSGHWDHYQEDMFPPMKLDET----EEMVLRPMNCPHHMMIYNNKPHSYRELPIR 356

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AE G+++R E SG++ GL RVRG T +D+H+F   +Q+  E  ++ N+I  +YKDFGFE
Sbjct: 357 IAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVNMIQDVYKDFGFE 416

Query: 422 KIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
               +LS R     EK    D +W+ AEN++K   D +  S ++ I      GE AFYGP
Sbjct: 417 DYRFRLSYRDPEDKEKYFDDDEMWNKAENMIKEAADELGLSYEEAI------GEAAFYGP 470

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  +K A+G++    T Q+DF LP RF   Y+    E+  PV+IHR V  ++ERF+  
Sbjct: 471 KLDVQVKTAMGKEETLSTAQLDFLLPERFELTYIGQDGEQHRPVVIHRGVVSTMERFVAF 530

Query: 538 MIENFKGNLPLWLSPIQA-IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           + E  KG  P WL+P Q  I+        +YA+ I + LKS  + +E D RNE + YKIR
Sbjct: 531 LTEETKGAFPTWLAPKQVEIIPVNLDLHYDYAKSIQDELKSQGVRVEIDDRNEKMGYKIR 590

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGS 626
           E  ++KIP  I+ GDKE     + +R++GS
Sbjct: 591 EAQMQKIPYQIVVGDKEVENNEVNVRKYGS 620


>gi|225868159|ref|YP_002744107.1| threonyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus]
 gi|259516675|sp|C0MCN7|SYT_STRS7 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|225701435|emb|CAW98547.1| threonyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus]
          Length = 648

 Score =  522 bits (1345), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 267/636 (41%), Positives = 403/636 (63%), Gaps = 23/636 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           I +TFPDG+++ F    T  ++A+SIS+SLAKKA+A   NG++ D +  + E GSIEIIT
Sbjct: 2   ITITFPDGAVREFESGVTTFEIADSISKSLAKKALAGKFNGQLIDTTRAIEEDGSIEIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
            +   +  V+RHS AH+ A+A + ++P++ + +GP I DGFYYD D  +   S+++L +I
Sbjct: 62  ADHEDAFEVLRHSAAHLFAQAAKRLFPKLHLGVGPAIADGFYYDTDNADGQISNEDLPRI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFD 181
           E++M++I+  + P +++ ++ E+A ELF  K + YKVE++ E       +T+YRQGE+ D
Sbjct: 122 EEEMKKIVKENFPCIREEITKEEALELF--KDDPYKVELINEHADDAAGLTVYRQGEFVD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++  F L+ VAGAYWRG+S+  M+ R+YGTAW  +++L  YL  LEE+
Sbjct: 180 LCRGPHVPSTGRIQ-VFHLLNVAGAYWRGNSDNNMMQRVYGTAWFDKKDLKAYLTRLEEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+++ G G+ FW   G  I +TL  Y+  K +   Y+ + TP +
Sbjct: 239 KERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRTLERYITDKELASGYQHVYTPPL 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHW+ Y+ +MF        + D   F L+PMNCP H+ V+ + + SYRELP
Sbjct: 299 ASVELYKTSGHWEHYQEDMFPTM----DMGDGEEFVLRPMNCPHHIQVYKNHVHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  T +D H+F   EQ+  E  +   LII +Y+DF 
Sbjct: 355 IRIAELGMMHRYEKSGALSGLQRVREMTLNDGHLFVMPEQIQEEFQRALQLIIDVYEDFN 414

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R      K   +D +W++A++++K  LD +       ++     GE AFY
Sbjct: 415 LTDYRFRLSYRDPKDTHKYYDNDEMWENAQSMLKAALDEMG------VDYFEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G +    TIQ+DF LP RFN  Y+ +  E+  PVMIHR V  ++ERF 
Sbjct: 469 GPKLDIQVKTALGNEETLSTIQLDFLLPERFNLSYIGADGEEHRPVMIHRGVISTMERFT 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IE +KG  P WL+P Q  V  I++ A ++YA E+A  L+ H +  + D RNE + YK
Sbjct: 529 AILIETYKGAFPTWLAPRQVTVIPISNEAHIDYAWEVAKTLRDHGIRADVDDRNEKMQYK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
           IR     KIP  +I GDKE  ++S+ +RR+GS  T 
Sbjct: 589 IRASQTSKIPYQLIVGDKEMQDKSVNVRRYGSKATH 624


>gi|329115958|ref|ZP_08244675.1| threonine--tRNA ligase [Streptococcus parauberis NCFD 2020]
 gi|326906363|gb|EGE53277.1| threonine--tRNA ligase [Streptococcus parauberis NCFD 2020]
          Length = 648

 Score =  522 bits (1345), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 265/640 (41%), Positives = 406/640 (63%), Gaps = 23/640 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK++FPDG+++ F    T  ++A+SIS SLAKKA+A   NG++ D   P+ E GSIEI+T
Sbjct: 2   IKISFPDGAVREFETGVTTFEIAQSISNSLAKKALAGKFNGQLIDTVRPITEDGSIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQI 122
           P+   + +V+RHS AH+ A+A + ++PE+ + +GP I +GFYYD D +    S+++L +I
Sbjct: 62  PDHEDAFSVLRHSAAHLFAQAAKRLFPEIHLGVGPAITEGFYYDTDNQAGQISNEDLPRI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFD 181
           E++M++I+  + P +++ +S ++A ++F  K + YKVE++ E       +T+YRQGE+ D
Sbjct: 122 EEEMKKIVKENFPCIREEVSKDEALDIF--KDDPYKVELISEHADDAAGLTIYRQGEFVD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++  F L+ VAGAYWRG+S+  M+ R+YGTAW  +++L  YL  LEE+
Sbjct: 180 LCRGPHVPSTGRIQ-VFHLLNVAGAYWRGNSDNAMMQRVYGTAWFDKKDLKAYLTRLEEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+++ G G+ FW   G  I +TL  Y+  K +   Y+ + TP +
Sbjct: 239 KERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRTLERYITDKELASGYQHVYTPPM 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHW+ Y+ +MF        + D   F L+PMNCP H+ V+ + + SYRELP
Sbjct: 299 ASVELYKTSGHWEHYQEDMFPTM----DMGDGEEFVLRPMNCPHHIQVYKNHVHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  T +D H+F T EQ+  E  +   LII +Y+DF 
Sbjct: 355 IRIAELGMMHRYEKSGALSGLQRVREMTLNDGHLFVTPEQIQEEFQRALQLIIDVYEDFN 414

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R      K   +D +W++A+ ++K  LD +       ++     GE AFY
Sbjct: 415 LTDYRFRLSYRDPKDTHKYYDNDEMWENAQAMLKAALDEMG------VDYFEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G +    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF 
Sbjct: 469 GPKLDIQVKTALGNEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMIHRGVISTMERFT 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IE +KG  P WL+P Q  V  I++ A ++YA E+A  L+   +  + D RNE + YK
Sbjct: 529 AILIETYKGAFPTWLAPHQVTVIPISNEAHIDYAWEVAKTLRDRGIRADVDDRNEKMQYK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           IR     KIP  +I GDKE  ++++ +RR+GS  T   S+
Sbjct: 589 IRASQTSKIPYQLIVGDKEMEDKAVNVRRYGSKATHTESI 628


>gi|327461002|gb|EGF07335.1| threonine--tRNA ligase [Streptococcus sanguinis SK1057]
          Length = 647

 Score =  522 bits (1344), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 259/640 (40%), Positives = 408/640 (63%), Gaps = 23/640 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  + E G+IEI+T
Sbjct: 2   IKITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGAIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQI 122
           P+   +L ++RHS AH+ A+A + ++P++ + +GP I+DGFYYD D E    S+++L +I
Sbjct: 62  PDHEDALDILRHSAAHLFAQAARRLFPDIHLGVGPAIQDGFYYDTDNEAGQISNEDLPRI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWFD 181
           E++M++I+  + P +++ ++ ++ARE+F  K + YK+E++E     E  +T+YRQGE+ D
Sbjct: 122 EEEMKKIVKENFPSIREEVTKDEAREIF--KNDPYKLELIEEHSEDEGGLTIYRQGEYVD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++  F L+ VAGAYWRG+S+  M+ R+YGTAW  +++L +YL   EE+
Sbjct: 180 LCRGPHVPSTGRIQ-IFHLLNVAGAYWRGNSDNAMMQRVYGTAWFDKKDLKKYLQMREEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+++ G G+ FW   G  + + L  Y+  +++   Y+ + TP +
Sbjct: 239 KERDHRKLGKELDLFMISQEVGQGLPFWLPNGATVRRELERYIVDKELASGYQHVYTPPL 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHW+ Y+ +MF        + D   F L+PMNCP H+ V+ H + SYRELP
Sbjct: 299 ASVELYKTSGHWEHYQEDMFPTM----DMGDGEEFVLRPMNCPHHIQVYKHHVHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y DF 
Sbjct: 355 IRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYADFN 414

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
             +   +LS R      K   +D +W++A+ +++  LD +       ++     GE AFY
Sbjct: 415 LTEYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G +    TIQ+DF LP RF+  YV +  E+  PVMIHR V  ++ERF 
Sbjct: 469 GPKLDIQVKTALGNEETLSTIQLDFLLPERFDLKYVGADGEEHRPVMIHRGVISTMERFT 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IEN+KG  P WL+P Q  +  +++ A ++YA ++A  L+   +  + D RNE + YK
Sbjct: 529 AILIENYKGAFPTWLAPHQVTLIPVSNEAHIDYAWQVAKKLRDKGVRADVDERNEKMQYK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           IR     KIP  +I GDKE  + ++ +RR+G   T  + +
Sbjct: 589 IRASQTSKIPYQLIVGDKEVEDGTVNVRRYGQKETHTIPV 628


>gi|332367135|gb|EGJ44871.1| threonine--tRNA ligase [Streptococcus sanguinis SK1059]
          Length = 647

 Score =  522 bits (1344), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 259/640 (40%), Positives = 408/640 (63%), Gaps = 23/640 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  + E G+IEI+T
Sbjct: 2   IKITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGAIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQI 122
           P+   +L ++RHS AH+ A+A + ++P++ + +GP I+DGFYYD D E    S+++L +I
Sbjct: 62  PDHEDALDILRHSAAHLFAQAARRLFPDIHLGVGPAIQDGFYYDTDNEAGQISNEDLPRI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWFD 181
           E++M++I+  + P +++ ++ ++ARE+F  K + YK+E++E     E  +T+YRQGE+ D
Sbjct: 122 EEEMKKIVKENFPSIREEVTKDEAREIF--KNDPYKLELIEEHSEDEGGLTIYRQGEYVD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++  F L+ VAGAYWRG+S+  M+ R+YGTAW  +++L +YL   EE+
Sbjct: 180 LCRGPHVPSTGRIQ-IFHLLNVAGAYWRGNSDNAMMQRVYGTAWFDKKDLKKYLQMREEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+++ G G+ FW   G  + + L  Y+  +++   Y+ + TP +
Sbjct: 239 KERDHRKLGKELDLFMISQEVGQGLPFWLPNGATVRRELERYIVDKELASGYQHVYTPPL 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHW+ Y+ +MF        + D   F L+PMNCP H+ V+ H + SYRELP
Sbjct: 299 ASVELYKTSGHWEHYQEDMFPTM----DMGDGEEFVLRPMNCPHHIQVYKHHVHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y DF 
Sbjct: 355 IRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYADFN 414

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
             +   +LS R      K   +D +W++A+ +++  LD +       ++     GE AFY
Sbjct: 415 LTEYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G +    TIQ+DF LP RF+  YV +  E+  PVMIHR V  ++ERF 
Sbjct: 469 GPKLDIQVKTALGNEETLSTIQLDFLLPERFDLKYVGADGEEHRPVMIHRGVISTMERFT 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IEN+KG  P WL+P Q  +  +++ A ++YA ++A  L+   +  + D RNE + YK
Sbjct: 529 AILIENYKGAFPTWLAPHQVTLIPVSNEAHIDYAWQVAKKLRDKGVRADVDERNEKMQYK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           IR     KIP  +I GDKE  + ++ +RR+G   T  + +
Sbjct: 589 IRASQTSKIPYQLIVGDKEVEDGTVNVRRYGQKETHTIPV 628


>gi|327463110|gb|EGF09431.1| threonine--tRNA ligase [Streptococcus sanguinis SK1]
          Length = 647

 Score =  522 bits (1344), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 260/640 (40%), Positives = 407/640 (63%), Gaps = 23/640 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+TFPDG+++ F    +  ++A+SIS SLAKKA+A   NGK+ D +  + E GSIEI+T
Sbjct: 2   IKITFPDGAVREFESGVSTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGSIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQI 122
           P+   +L ++RHS AH+ A+A + ++P++ + +GP I+DGFYYD D E    S+++L  I
Sbjct: 62  PDHEDALDILRHSAAHLFAQAARRLFPDIHLGVGPAIQDGFYYDTDNEAGQISNEDLPLI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWFD 181
           E++M++I+  + P +++ +S ++ARE+F  K + YK+E++E     E  +T+YRQGE+ D
Sbjct: 122 EEEMKKIVKENFPSIREEVSKDEAREIF--KNDPYKLELIEEHSEDEGGLTIYRQGEYVD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++  F L+ VAGAYWRG+S+  M+ R+YGTAW  +++L +YL   EE+
Sbjct: 180 LCRGPHVPSTGRIQ-IFHLLNVAGAYWRGNSDNAMMQRVYGTAWFDKKDLKKYLQMREEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+++ G G+ FW   G  + + L  Y+  +++   Y+ + TP +
Sbjct: 239 KERDHRKLGKELDLFMISQEVGQGLPFWLPNGATVRRELERYIVDKELASGYQHVYTPPL 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHW+ Y+ +MF        + D   F L+PMNCP H+ V+ H + SYRELP
Sbjct: 299 ASVELYKTSGHWEHYQEDMFPTM----DMGDGEEFVLRPMNCPHHIQVYKHHVHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y DF 
Sbjct: 355 IRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYADFN 414

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
             +   +LS R      K   +D +W++A+ +++  LD +       ++     GE AFY
Sbjct: 415 LTEYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G +    TIQ+DF LP RF+  YV +  E+  PVMIHR V  ++ERF 
Sbjct: 469 GPKLDIQVKTALGNEETLSTIQLDFLLPERFDLKYVGADGEEHRPVMIHRGVISTMERFT 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IEN+KG  P WL+P Q  +  +++ A ++YA ++A  L+   +  + D RNE + YK
Sbjct: 529 AILIENYKGAFPTWLAPHQVTLIPVSNEAHIDYAWQVAKKLRDKGVRADVDERNEKMQYK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           IR     KIP  +I GDKE  + ++ +RR+G   T  + +
Sbjct: 589 IRASQTSKIPYQLIVGDKEVEDGTVNVRRYGQKETHTIPV 628


>gi|261408878|ref|YP_003245119.1| threonyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
 gi|261285341|gb|ACX67312.1| threonyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
          Length = 645

 Score =  522 bits (1344), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 257/632 (40%), Positives = 402/632 (63%), Gaps = 25/632 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           I +  PDGS++ +   +   DVA SIS  L K AVA  ++G V DLS P+++G+ IEI+T
Sbjct: 3   ISIKLPDGSVREYEAGSNIEDVAASISSGLRKNAVAGKMDGIVVDLSTPLQDGALIEIVT 62

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIW--PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
            + P  L V+RHS AH++A+A + ++   EV++ +GP+IEDGFYYD D E+P + ++L +
Sbjct: 63  QDTPEGLEVMRHSTAHLLAQATKRLYGQKEVKLGVGPVIEDGFYYDMDLEEPLNPEDLQK 122

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK+M+ II  + P +++ +S   A  +F    + YK+E++ ++P    +T+Y QGE+FD
Sbjct: 123 IEKEMERIIGENLPIVRKEVSRADALRIFGELGDPYKLELINALPEDSIITIYEQGEFFD 182

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG++K  FKLM VAGAYWRGDS   ML R+YGTA+  + +L ++L  LEE+
Sbjct: 183 LCRGPHVPSTGKIK-VFKLMNVAGAYWRGDSKNKMLQRVYGTAFVKKAQLDEHLRLLEEA 241

Query: 242 EKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISY---MRRKIKDDYEEINTP 297
           +KRDHRKL +E+ +F  ++  G G+  W   G K+ +TL  Y   M  ++   Y+ + TP
Sbjct: 242 KKRDHRKLGKELQMFTFSQLVGQGLPIWLPNGAKLRRTLERYIVDMEERL--GYQHVYTP 299

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  L++ SGHW+ Y+ +MF     D+         L+PMNCP H+ V+   + SYR+
Sbjct: 300 VLGNVELYKTSGHWEHYQEDMFPKMEMDN-----EELVLRPMNCPHHMMVYKSDMHSYRD 354

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AE G  +R E SG+L GL RVR  T +D+H+FC  +Q+  E  ++  LI+++YKD
Sbjct: 355 LPIRIAELGMQHRYEMSGALTGLHRVRAMTLNDSHIFCRPDQIKEEFARVIQLIMTVYKD 414

Query: 418 FGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           FG      +LS R     EK   +D +W+ ++ +++ V++++     +        GE A
Sbjct: 415 FGIHDYRFRLSYRDPQDTEKYFQNDEMWEMSQRMLREVVESLDMPFYE------AEGEAA 468

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  ++ A+G++    T+Q+DF LP RF   YV    +K  PV+IHR + G++ER
Sbjct: 469 FYGPKLDVQIRTALGKEETLSTVQLDFLLPERFELEYVGDDGQKHRPVVIHRGILGTMER 528

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           F   ++ENF G LPLWLSP+Q  V  ++++  +YA+E+A  L+   +S+E D RNE + Y
Sbjct: 529 FTAFLLENFAGALPLWLSPVQVKVIPVSNAFEDYAKEVAEKLQFAGISVEPDLRNEKLGY 588

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
           KIRE  ++KIP + I G+ E +  ++ +R+ G
Sbjct: 589 KIREAQLEKIPYMFIVGENEKNAGAVSVRKRG 620


>gi|218190922|gb|EEC73349.1| hypothetical protein OsI_07557 [Oryza sativa Indica Group]
          Length = 674

 Score =  522 bits (1344), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 263/571 (46%), Positives = 376/571 (65%), Gaps = 18/571 (3%)

Query: 56  EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFS 115
           E  + + T E    L  IRH+CAH+MA AVQ ++P  +V IGP I++GFYYDFD E P +
Sbjct: 88  EERVVLPTNESSDRLLRIRHTCAHVMAMAVQKLFPNSKVTIGPWIDNGFYYDFDME-PLT 146

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
             +L +I+K+M  II ++ P +++ +S E+A++  E+  E YK+EILE I  +E +T+Y 
Sbjct: 147 DKDLKRIKKEMDRIIRKNLPLVREEVSREEAQKRIEALNEPYKLEILEGI-KEEPITIYH 205

Query: 176 QGE-WFDLCRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQ 233
            GE W+DLC GPHV STG++ ++  +L  VAGAYWRGD +  ML RIYGTAW T+ +L  
Sbjct: 206 IGEEWWDLCAGPHVESTGKIDRRAVELESVAGAYWRGDESNQMLQRIYGTAWETEDQLKA 265

Query: 234 YLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTL-ISYMRRKIKDDY 291
           Y++F EE+++RDHR+L  ++DLF I ED G G++FWH KG  I   L  S+ +  ++  Y
Sbjct: 266 YIHFKEEAKRRDHRRLGLDLDLFSIQEDAGGGLVFWHPKGAIIRHVLEDSWKQIHLQRGY 325

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           + + TP V    LW+ SGH D Y+ NM+     +D +     + L+PMNCP H+ V+   
Sbjct: 326 DLLYTPHVAKAELWKVSGHIDFYKENMYNQMDVEDEL-----YQLRPMNCPYHILVYKRK 380

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI 411
           L SYR+ P+R+AE G+VYR E SGSLHGL RVRGFTQDDAH+FC ++Q+ +E   + +L 
Sbjct: 381 LHSYRDFPIRVAELGTVYRYELSGSLHGLFRVRGFTQDDAHIFCLEDQIKDEIRGVLDLT 440

Query: 412 ISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
             I   FGF    + LSTRPEK VGSD +W+ A   +K  L+      + +++ G     
Sbjct: 441 EQILGQFGFRYYEINLSTRPEKSVGSDDIWEKATLALKDALED--KGWEYKVDEG----G 494

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
           GAFYGPK +  ++DA+GR WQC T+QVDFNLP RF+  YVNS+SEK  P+MIHRA+ GS+
Sbjct: 495 GAFYGPKIDLKIEDALGRKWQCSTVQVDFNLPERFDITYVNSNSEKKRPIMIHRAILGSL 554

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           ERF G++IE++ G+ PLWL+PIQA +  +T + ++Y  E+A+ LKS  +  E     E +
Sbjct: 555 ERFFGVLIEHYAGDFPLWLAPIQARILPVTDNELQYCNEVASELKSKGIRAEV-CHGERL 613

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIR 622
              IR    KK+P++ + G KE   R++ IR
Sbjct: 614 PKLIRNAETKKVPLMAVVGPKEVQARTLTIR 644


>gi|251798759|ref|YP_003013490.1| threonyl-tRNA synthetase [Paenibacillus sp. JDR-2]
 gi|247546385|gb|ACT03404.1| threonyl-tRNA synthetase [Paenibacillus sp. JDR-2]
          Length = 645

 Score =  521 bits (1343), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 261/653 (39%), Positives = 407/653 (62%), Gaps = 29/653 (4%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           I++TFPDG+++ +    T  +VA SIS  L K A+A  INGKV D+  P+  + +IEI+T
Sbjct: 3   IQVTFPDGAVREYAAGTTIEEVAGSISPGLRKNAIAGKINGKVVDVYSPIESDAAIEIVT 62

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIW--PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
            E    L V RHS AH+MA+A++ ++    V++ IGP+IEDGFYYD D EQ  + ++L +
Sbjct: 63  VESADGLEVYRHSTAHLMAQAIKRLYGNANVKLGIGPVIEDGFYYDIDMEQSLTPEDLTK 122

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK+MQ I+  +    ++ +S ++A  +F    +  K+E++  +P    +T+Y QGE+FD
Sbjct: 123 IEKEMQRIVNENLDIRRRVVSRDEALAIFTELDDNLKLELIRDLPEDSVITMYDQGEFFD 182

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ STG++K F KL+ VAGAYWRGDS   ML RIYGTA+  + EL ++L+FLEE+
Sbjct: 183 LCRGPHLPSTGRIKAF-KLLSVAGAYWRGDSKNKMLQRIYGTAFAKKAELDEHLHFLEEA 241

Query: 242 EKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           +KRDHRKL +E+ +F  + E G G+  W   G K+ +TL  Y+   + +  YE + TP +
Sbjct: 242 KKRDHRKLGKELKMFTFSREVGQGLPLWLPNGAKVRRTLERYIVDLEERLGYEHVYTPVL 301

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +  L++ SGHW+ Y  +MF V   D+         L+PMNCP H+ V+   ++SYR+LP
Sbjct: 302 ANVELYKISGHWEHYSEDMFPVMALDN-----EELVLRPMNCPHHMMVYKSDMRSYRDLP 356

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           VR+AE G+++R E SG+L GL RVR  T +DAH+FC  +Q+  E  ++ NLI  +Y+DFG
Sbjct: 357 VRIAEMGTMHRYEMSGALTGLHRVRAMTLNDAHIFCRPDQIKEEFARVVNLIRKVYEDFG 416

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL----GE 471
            ++   +LS R     EK   +D +W+ ++ +++ V++ +          G+      GE
Sbjct: 417 IKEYRFRLSYRDPQDTEKYFQNDEMWEMSQRMLREVVEEL----------GLPFFEAEGE 466

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
            AFYGPK +  +K A+G++    T Q+DF LP RF   Y+    +K  PV+IHR +  ++
Sbjct: 467 AAFYGPKLDVQIKTALGKEETLSTAQLDFLLPDRFELEYIGEDGKKHRPVVIHRGIISTM 526

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           ER    ++ENF G LPLWLSP+QA V  ++++   YA+E+   L+   + +E+D RNE +
Sbjct: 527 ERMTAFLLENFAGALPLWLSPVQAKVIPVSTAYEAYAREVEEKLQLAGIRVESDLRNEKL 586

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            YKIRE  ++K+P +++ G+ EA   S+ +R+ G        + + + +L  E
Sbjct: 587 GYKIREAQLEKLPYMLVVGENEAQSGSVSVRKRGEGDIGAKPVAELVELLQNE 639


>gi|205374566|ref|ZP_03227362.1| threonyl-tRNA synthetase [Bacillus coahuilensis m4-4]
          Length = 643

 Score =  521 bits (1343), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 263/654 (40%), Positives = 412/654 (62%), Gaps = 24/654 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           M   IKLTFPDG++K FP   T  DVA SIS  L KK++A  +NG+  DL  P+  +G I
Sbjct: 1   MSEMIKLTFPDGAVKEFPKGTTTEDVAASISPGLKKKSIAGKLNGQGVDLRTPLMIDGDI 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE--VQVAIGPIIEDGFYYDFDKEQPFSSD 117
           EIIT     +L ++RHS AH+MA+A++ ++ +  V++ +GP+IE GFYYD D E   + +
Sbjct: 61  EIITAGSEDALEILRHSTAHLMAQAIKRLYGDESVKLGVGPVIEGGFYYDVDSEHKITPE 120

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +L  IEK+M++I+  +   ++  +S ++A+  F    + YKVE+L++IPA E V++Y QG
Sbjct: 121 DLPAIEKEMKKIVNENLDIVRSEVSRDEAKARFAG--DEYKVELLDAIPADEAVSIYEQG 178

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           E+FDLCRG HV STG++K+F KL+ +AGAYWRG+S+  ML RIYGTA+ T+ EL + L  
Sbjct: 179 EFFDLCRGIHVPSTGKIKEF-KLLSIAGAYWRGNSDNKMLQRIYGTAFFTKDELKEQLRL 237

Query: 238 LEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEIN 295
           LEE+++RDHRK+ +E+DLF  ++  G G+  W  KG  + + +  Y+  ++ K  Y+ + 
Sbjct: 238 LEEAKERDHRKIGKELDLFMNSQKVGQGLPLWLPKGATVRRMIERYIVDKEEKLGYDHVY 297

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP +    L++ SGHWD Y+ NMF V   D+         L+PMNCP H+ ++ +G+ SY
Sbjct: 298 TPVLGSVDLYKTSGHWDHYQENMFPVMEMDN-----EELVLRPMNCPHHMMIYKNGIHSY 352

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+  E  ++  L++ +Y
Sbjct: 353 RELPIRIAELGTMHRYEMSGALAGLQRVRGMTLNDAHIFVRPDQIKEEFKRVVRLVMEVY 412

Query: 416 KDFGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
           KDF  +    +LS R     EK    D +W+ A++++K  +D +       ++     GE
Sbjct: 413 KDFDLKDYSFRLSYRDPEDTEKYFDDDQMWERAQSMLKEAMDELD------VHYFEADGE 466

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
            AFYGPK +  +K A+G++    T+Q+DF LP RF+  YV    ++  PV+IHR V  ++
Sbjct: 467 AAFYGPKLDVQVKTALGKEETLSTVQLDFLLPERFDLTYVGEDGKQHRPVVIHRGVVSTM 526

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNET 590
           ERF+  +IE +KG  P WL+P+Q  V  ++     +YA+++   L+S  +  + D R+E 
Sbjct: 527 ERFVAFLIEEYKGAFPTWLAPVQVQVIPVSPDVHFDYAKKVQEELRSAGIRADLDSRDEK 586

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           I YKIRE  ++KIP +++ GD E  E ++ +R++G   ++ +        L KE
Sbjct: 587 IGYKIREAQMQKIPYMLVVGDNEIEEEAVNVRKYGEQKSETLPFAQFFTALKKE 640


>gi|124516423|gb|EAY57931.1| Threonyl-tRNA synthetase [Leptospirillum rubarum]
          Length = 617

 Score =  521 bits (1343), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 263/604 (43%), Positives = 372/604 (61%), Gaps = 20/604 (3%)

Query: 53  PVREGSI--EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK 110
           P+ EG +  + +T ++  SL  +RHS AH +A+AV+ ++P  QV +GP  E+GFYYDF  
Sbjct: 21  PLTEGQMGPKSMTEKESESLRALRHSAAHTLAQAVKKLYPSAQVGVGPATEEGFYYDFRY 80

Query: 111 EQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN 170
           E+PF+ ++L +IE +M+ +I    P +++ +S  +A +LF  + E +K+E+++ IP    
Sbjct: 81  ERPFTPEDLERIENEMKSLIRSSLPIVRKPVSRGEAEKLFRERNEPFKLELIQGIPEDAE 140

Query: 171 VTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQE 230
           +T+Y QGE+ DLCRGPHV STG++    +L+  + AYW+G  + P L RIYGTA+++++E
Sbjct: 141 ITVYEQGEFVDLCRGPHVSSTGEIPAV-RLLSTSSAYWKGVESNPSLQRIYGTAFHSEKE 199

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFH-IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           L +YL   EE ++RDHRKL RE+ LF  + E G+G++ W  +G +I +TL      KI  
Sbjct: 200 LEEYLRQQEEIQRRDHRKLGRELGLFRTLDEKGAGLVLWLPRGSQIRRTLEELW--KILH 257

Query: 290 D---YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA 346
           D   Y  + TP +    LW QSGHWD Y+ +MF     + T      + LKPMNCP H+ 
Sbjct: 258 DRHGYRYVYTPHIARLDLWMQSGHWDYYQDSMFRPMETEGT-----AYELKPMNCPFHIL 312

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           +F   ++SYR+LP+RL+E G+VYR E SG+LHGLMRVRGFTQDDAH+F   E +  E   
Sbjct: 313 IFRESVQSYRDLPIRLSELGTVYRYERSGTLHGLMRVRGFTQDDAHIFYPPEDLAGEIRN 372

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           +  L+  +   FGF    V LSTRPEK VGSD  W+ A   ++  L+      +  I   
Sbjct: 373 VLALVDQMIGRFGFTDRTVYLSTRPEKSVGSDENWEMATGSLRRALE------ESGIPYE 426

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
           V  GEG FYGPK +    DAIGR WQ  TIQVDFNLP +F+  Y N   E C P+MIHRA
Sbjct: 427 VDPGEGVFYGPKIDIKFHDAIGRAWQLSTIQVDFNLPEKFDLTYRNDSGEPCRPIMIHRA 486

Query: 527 VFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF 586
           +FGSIERF GI+IE++ G  PLWL+P Q  + TI    + YAQ + N LK   +  E DF
Sbjct: 487 LFGSIERFFGILIEHYAGAFPLWLAPEQVRIMTIADRHIPYAQTVLNRLKDRGVRAEGDF 546

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           RNE I +K+RE  + KIP + + GD+E  E  + +R           L   +  L + S 
Sbjct: 547 RNEKIGFKVREAQMAKIPEMWVVGDREVEENRVSVRTREGEKKDLRPLESELEDLFRRSG 606

Query: 647 PPDC 650
           PP+ 
Sbjct: 607 PPEM 610


>gi|323351205|ref|ZP_08086861.1| threonine--tRNA ligase [Streptococcus sanguinis VMC66]
 gi|322122429|gb|EFX94140.1| threonine--tRNA ligase [Streptococcus sanguinis VMC66]
          Length = 647

 Score =  521 bits (1343), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 259/640 (40%), Positives = 408/640 (63%), Gaps = 23/640 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  + E G+IEI+T
Sbjct: 2   IKITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGAIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQI 122
           P+   +L ++RHS AH+ A+A + ++P++ + +GP I+DGFYYD D E    S+++L +I
Sbjct: 62  PDHEDALDILRHSAAHLFAQAARRLFPDIHLGVGPAIQDGFYYDTDNEAGQISNEDLPRI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWFD 181
           E++M++I+  + P +++ ++ ++ARE+F  K + YK+E++E     E  +T+YRQGE+ D
Sbjct: 122 EEEMKKIVKENFPSIREEVTKDQAREIF--KNDPYKLELIEEHSEDEGGLTIYRQGEYVD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++  F L+ VAGAYWRG+S+  M+ R+YGTAW  +++L +YL   EE+
Sbjct: 180 LCRGPHVPSTGRIQ-IFHLLNVAGAYWRGNSDNAMMQRVYGTAWFDKKDLKKYLQMREEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+++ G G+ FW   G  + + L  Y+  +++   Y+ + TP +
Sbjct: 239 KERDHRKLGKELDLFMISQEVGQGLPFWLPNGATVRRELERYIVDKELASGYQHVYTPPL 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHW+ Y+ +MF        + D   F L+PMNCP H+ V+ H + SYRELP
Sbjct: 299 ASVGLYKTSGHWEHYQEDMFPTM----DMGDGEEFVLRPMNCPHHIQVYKHHVHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y DF 
Sbjct: 355 IRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYADFN 414

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
             +   +LS R      K   +D +W++A+ +++  LD +       ++     GE AFY
Sbjct: 415 LTEYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G +    TIQ+DF LP RF+  YV +  E+  PVMIHR V  ++ERF 
Sbjct: 469 GPKLDIQVKTALGNEETLSTIQLDFLLPERFDLKYVGADGEEHRPVMIHRGVISTMERFT 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IEN+KG  P WL+P Q  +  +++ A ++YA ++A  L+   +  + D RNE + YK
Sbjct: 529 AILIENYKGAFPTWLAPHQVTLIPVSNEAHIDYAWQVAKKLRDKGVRADVDERNEKMQYK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           IR     KIP  +I GDKE  + ++ +RR+G   T  + +
Sbjct: 589 IRASQTSKIPYQLIVGDKEVEDGTVNVRRYGQKETHTIPV 628


>gi|217967413|ref|YP_002352919.1| threonyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
 gi|217336512|gb|ACK42305.1| threonyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
          Length = 638

 Score =  521 bits (1343), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 265/615 (43%), Positives = 393/615 (63%), Gaps = 22/615 (3%)

Query: 33  SLAKKAVAVAINGKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE 91
            L  +     ING   DL+    +GS +E++  E+     + RH+ AHI+A AV+ ++PE
Sbjct: 26  GLEGRVFGAKINGVFSDLNVYPPDGSLVELLDWENEEGRNIYRHTSAHILAHAVKELFPE 85

Query: 92  VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFE 151
           V++ IGP IEDGFYYDF +++PFS ++L +IE KM+EII R+ P  +  ++ E+A ++  
Sbjct: 86  VKLGIGPAIEDGFYYDFYRKEPFSQEDLEKIENKMKEIINRNLPIERIEVTREEAIKILR 145

Query: 152 SKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGD 211
             KE +K+E+LE IP  E ++ Y+QG + DLCRGPH+ ST  VK F KL+ V+GAYWRGD
Sbjct: 146 DLKEDFKLELLEEIPEGEKISFYKQGSFMDLCRGPHLPSTSWVKAF-KLLSVSGAYWRGD 204

Query: 212 SNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHR 270
              PM  RIYGT++ +++EL +YL   EE+++RDHRKL RE+++F+  E+ G G+IF+  
Sbjct: 205 EKNPMFQRIYGTSFPSEEELKKYLEEREEAQRRDHRKLGRELEIFNTFEEAGPGLIFYPP 264

Query: 271 KGWKIFQTLISYMRRK--IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTI 328
           KG  + + +I    RK  +K  Y  + TP ++   LW++SGHWD+YR NMF ++  D   
Sbjct: 265 KG-AMLRLIIEEFERKEHLKRGYFPVITPHLMQAELWKRSGHWDNYRENMFFLQVED--- 320

Query: 329 KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQ 388
              + +A+KPMNCPGH+ ++N  ++SYR+LP+R  E G+VYR E SG L+GL R RGFTQ
Sbjct: 321 ---KDYAVKPMNCPGHILIYNSKVRSYRDLPLRFFEMGTVYRYERSGVLYGLERARGFTQ 377

Query: 389 DDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIM 448
           DDAH+FCT+EQ+ +E   + + +  +   FG ++ +V LST+PEK +GSD +W+ A   +
Sbjct: 378 DDAHIFCTQEQLEDEIKGVLDFVFYMLDSFGLKEYVVTLSTKPEKYIGSDEIWEKATQAL 437

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
           K  L++        I   +  GEGAFYGPK +  LK  +G+ WQ  TIQVDFNLP RF+ 
Sbjct: 438 KNALESTG------IEYRIAEGEGAFYGPKIDVGLKGLLGKMWQGPTIQVDFNLPERFDL 491

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYA 568
            Y      K  PVMIHRA+ GS ERFIGI++E++ G  PLWL+P Q  +  I+    EYA
Sbjct: 492 TYDAPDGTKRRPVMIHRAILGSYERFIGILVEHYGGRFPLWLAPEQVRILPISERHNEYA 551

Query: 569 QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
           + +   L+++ +  E D     +NYK+R+   +K+P I I GDKE  E  + +R      
Sbjct: 552 EYVLRNLRNNDIRAEIDKDQAKLNYKLRKAIAEKVPYIFIVGDKEKEENKVSVR----VH 607

Query: 629 TQKVSLLDAIPILTK 643
            + + + D   ++TK
Sbjct: 608 NKDLGMFDLAYVVTK 622


>gi|291566329|dbj|BAI88601.1| threonyl-tRNA synthetase [Arthrospira platensis NIES-39]
          Length = 622

 Score =  521 bits (1343), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 271/616 (43%), Positives = 371/616 (60%), Gaps = 44/616 (7%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L  IRH+CAHI+A AVQ ++PE +VAIGP  + GFYYDFD+++PF+ ++L +I K+
Sbjct: 18  DREKLRRIRHTCAHILAMAVQKLFPETKVAIGPTTDTGFYYDFDRKEPFTPEDLGEITKE 77

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE------- 178
           M+ II  + P +++ ++ E+ R   +   E  K+EIL+SIP  E +T Y  G        
Sbjct: 78  MKRIIKGNLPVIREEVNREQMRGEIQQLNEPLKLEILDSIPETETMTRYFIGSPDMGRAV 137

Query: 179 -------------------WFDLCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLS 218
                              W+DLC GPH+ STG++      L  VAGAYWRGD   P L 
Sbjct: 138 HPEVEPSLMEPVVIPPQEFWWDLCAGPHLNSTGEINPDALALESVAGAYWRGDETLPQLQ 197

Query: 219 RIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQ 277
           RIYGTAW T ++L  Y    EE++KRDHRKL +E+DLF I ED G G++FWH KG ++  
Sbjct: 198 RIYGTAWETPEQLEYYWQQKEEAKKRDHRKLGQELDLFSIQEDAGGGLVFWHPKGSRMRL 257

Query: 278 TLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFAL 336
            +  Y R+  ++  YE + TP + +  LW+ SGH+D YR NMF     D    + +++ L
Sbjct: 258 LIEDYWRQAHLQGGYELLYTPHIANLALWKTSGHYDFYRENMF-----DQIEIENQSYQL 312

Query: 337 KPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT 396
           KPMNCP HV  +   L SYRELP+R AE G+VYR E SG LHGLMRVRGFTQDDAH+FC 
Sbjct: 313 KPMNCPFHVLTYQSHLHSYRELPIRWAELGTVYRYERSGVLHGLMRVRGFTQDDAHIFCL 372

Query: 397 KEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIK 456
            EQ+ +E L + NL   I  DFGF K  V LSTRP K VG+D +W  A + +   L+   
Sbjct: 373 PEQVADEILGVLNLTEKILSDFGFSKYEVNLSTRPSKSVGNDGVWQLATDALISALNI-- 430

Query: 457 NSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE 516
               D +   V  G GAFYGPK +  ++DAI R WQC TIQVDFNLP RFN  YV +   
Sbjct: 431 -KGWDYV---VDEGGGAFYGPKIDIKIQDAIARLWQCSTIQVDFNLPERFNMEYVAADGS 486

Query: 517 KCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLK 576
           +  P+MIHRA+FGS+ERF GI+IEN+ G+ PLWL+P+   V  ++    +YA+ I   LK
Sbjct: 487 RQRPIMIHRAIFGSLERFFGILIENYAGDFPLWLAPVMVRVLVVSDRFRDYAKSIVQSLK 546

Query: 577 SHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
             ++  E D   E +  +IR   ++KIP+ ++ G +E   +S+ +R         ++L  
Sbjct: 547 QQNIRAEVDNTGERLGKQIRACELEKIPVTVVIGQRELDNQSLSVRTRSRGDIGTMTL-- 604

Query: 637 AIPILTKESLPPDCQK 652
             P LT+E L  +  K
Sbjct: 605 --PQLTEEILKANAAK 618


>gi|297835784|ref|XP_002885774.1| hypothetical protein ARALYDRAFT_319286 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297331614|gb|EFH62033.1| hypothetical protein ARALYDRAFT_319286 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 650

 Score =  521 bits (1343), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 270/595 (45%), Positives = 389/595 (65%), Gaps = 24/595 (4%)

Query: 40  AVAINGKVCDLSDPVREGSIEIITPEDPRS--LAVIRHSCAHIMAEAVQSIWPEVQVAIG 97
           AVA    + + + P +     ++ P +  S  L  IRH+CAH+MA AVQ ++P+ +V IG
Sbjct: 48  AVATEPAISN-TGPKKTEPSTVVLPSNESSDKLLKIRHTCAHVMAMAVQKLFPDAKVTIG 106

Query: 98  PIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAY 157
           P I++GFYYDFD E P +  +L +I+K+M  II+R+ P L++ +S E+A+E   +  E Y
Sbjct: 107 PWIDNGFYYDFDME-PLTDKDLKRIKKEMDRIISRNLPLLREEVSREEAKERIMAINEPY 165

Query: 158 KVEILESIPAKENVTLYRQG-EWFDLCRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRP 215
           K+EILE I  +E +T+Y  G EW+DLC GPHV +TG++ KK  +L  VAGAYWRGD  R 
Sbjct: 166 KMEILEGI-KEEPITVYHIGNEWWDLCAGPHVETTGKINKKAVELESVAGAYWRGDEKRQ 224

Query: 216 MLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWK 274
           ML RIYGTAW ++++L  YL+F EE+++RDHR++ +++DLF I  E G G++FWH KG  
Sbjct: 225 MLQRIYGTAWESEEQLKAYLHFKEEAKRRDHRRIGQDLDLFSIQDEAGGGLVFWHPKG-A 283

Query: 275 IFQTLI--SYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           I + +I  S+ +  ++  Y+ I TP V    LW+ SGH D YR NM+     +D +    
Sbjct: 284 IVRNIIEESWKKMHVEHGYDLIYTPHVAKADLWKISGHLDFYRENMYDQMEIEDEL---- 339

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
            + L+PMNCP H+ ++    +SYR+LP+R+AE G+VYR E SGSLHGL RVRGFTQDDAH
Sbjct: 340 -YQLRPMNCPYHILLYQRKRQSYRDLPIRVAELGTVYRYELSGSLHGLFRVRGFTQDDAH 398

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
           +FC ++Q+ +E   + +L   I   FGF K  V LSTRPEK VG D +W+ A   ++  L
Sbjct: 399 IFCLEDQIKDEIRGVLDLTEEILSRFGFNKYEVNLSTRPEKSVGDDDIWEKATCALRDAL 458

Query: 453 DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
           D    S +      V  G GAFYGPK +  ++DA+GR WQC TIQVDFNLP RF+  YV+
Sbjct: 459 DDKGWSYE------VDEGGGAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDITYVD 512

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIA 572
           ++S+K  P+MIHRAV GS+ERF G++IE++ G+ PLWLSPIQ  V  +T + +E+ +E++
Sbjct: 513 TNSDKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQVRVLPVTDNQLEFCKEVS 572

Query: 573 NLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR-RFGS 626
             L++  +  E     E +   IR    +KIP++ + G KE    ++ +R RFG 
Sbjct: 573 KKLRACGVRAEL-CHGERLPKLIRNAETQKIPLMAVVGPKEVETGTVTVRSRFGG 626


>gi|327490276|gb|EGF22064.1| threonine--tRNA ligase [Streptococcus sanguinis SK1058]
          Length = 647

 Score =  521 bits (1343), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 258/640 (40%), Positives = 408/640 (63%), Gaps = 23/640 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  + E G+IEI+T
Sbjct: 2   IKITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGTIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQI 122
           P+   +L ++RHS AH+ A+A + ++P++ + +GP I+DGFYYD D E    S+++L +I
Sbjct: 62  PDHEDALDILRHSAAHLFAQAARRLFPDIHLGVGPAIQDGFYYDTDNEAGQISNEDLPRI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWFD 181
           E++M++I+  + P +++ ++ ++ARE+F  K + YK+E++E     E  +T+YRQGE+ D
Sbjct: 122 EEEMKKIVKENFPSIREEVTKDEAREIF--KNDPYKLELIEEHSEDEGGLTIYRQGEYVD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++  F L+ VAGAYWRG+S+  M+ R+YGTAW  +++L +YL   EE+
Sbjct: 180 LCRGPHVPSTGRIQ-IFHLLNVAGAYWRGNSDNAMMQRVYGTAWFDKKDLKKYLQMREEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+++ G G+ FW   G  + + L  Y+  +++   Y+ + TP +
Sbjct: 239 KERDHRKLGKELDLFMISQEVGQGLPFWLPNGATVRRELERYIVDKELASGYQHVYTPPL 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHW+ Y+ +MF        + D   F L+PMNCP H+ V+ H + SYRELP
Sbjct: 299 ASVELYKTSGHWEHYQEDMFPTM----DMGDGEEFVLRPMNCPHHIQVYKHHVHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y DF 
Sbjct: 355 IRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYADFN 414

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
             +   +LS R      K   +D +W++A+ +++  LD +       ++     GE AFY
Sbjct: 415 LTEYRFRLSLRDPQDTHKYYDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G +    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF 
Sbjct: 469 GPKLDIQVKTALGNEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMIHRGVISTMERFT 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IEN+KG  P WL+P Q  +  +++ A ++YA ++A  L+   +  + D RNE + YK
Sbjct: 529 AILIENYKGAFPTWLAPHQVTLIPVSNEAHIDYAWQMAKKLRDKGVRADVDERNEKMQYK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           IR     KIP  +I GDKE  + ++ +RR+G   T  + +
Sbjct: 589 IRASQTSKIPYQLIVGDKEVEDGTVNVRRYGQKETHTIPV 628


>gi|294619108|ref|ZP_06698603.1| threonyl-tRNA synthetase [Enterococcus faecium E1679]
 gi|291594769|gb|EFF26151.1| threonyl-tRNA synthetase [Enterococcus faecium E1679]
          Length = 646

 Score =  521 bits (1342), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 266/635 (41%), Positives = 404/635 (63%), Gaps = 24/635 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+TFPDG++K F    T   +AESIS+SLAKKA+A  +NGK+ DL+ P+ E  SIEIIT
Sbjct: 2   IKITFPDGAVKEFESGTTTLAIAESISKSLAKKALAGKVNGKLVDLTRPIEEDASIEIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQI 122
           P+   +L ++RHS AH+MA+A++ ++P +   +GP I+ GFYYD D  Q   ++++L  I
Sbjct: 62  PDHEDALGLVRHSAAHLMAQAMRRLYPNIHFGVGPAIDSGFYYDTDNGQNQVTAEDLPAI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M +I+  + P  ++ LS ++A E+F S  + YKVE++  +P +E +T Y+QGE+ DL
Sbjct: 122 EAEMMKIVKENLPIERRVLSKQEALEIFAS--DPYKVELISELP-EEVITAYQQGEFIDL 178

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG+++  FKL+ VAGAYWRG+SN  M+ R+YGTA+  ++ L +Y+   EE++
Sbjct: 179 CRGPHVPSTGRIQ-VFKLLSVAGAYWRGNSNNQMMQRVYGTAFFDKKALKEYIRLREEAK 237

Query: 243 KRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVL 300
           +RDHRKL +E+DLF ++ E GSG+ FW  KG  I +T+  Y+  +++   Y+ + TP + 
Sbjct: 238 ERDHRKLGKELDLFMVSPEVGSGLPFWLPKGATIRRTIERYIVDKEVSLGYQHVYTPIMG 297

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D  L++ SGHWD Y+ +MF        + D     L+PMNCP H+ V+ + + SYRELP+
Sbjct: 298 DVELYKTSGHWDHYQEDMFPPM----DMGDGEMLVLRPMNCPHHMMVYKNTIHSYRELPI 353

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  +   L++++Y DF  
Sbjct: 354 RIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVAVYADFNI 413

Query: 421 EKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
                +LS R     +K    DA+W+ A+ ++K  +D ++      ++     GE AFYG
Sbjct: 414 TDYRFRLSYRDPNNTDKYFDDDAMWEKAQAMLKAAMDELE------LDYFEAEGEAAFYG 467

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH-PVMIHRAVFGSIERFI 535
           PK +  +K A+G +    TIQ+DF LP RF+  YV    E  H PV+IHR +  ++ERF+
Sbjct: 468 PKLDVQVKTALGTEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTMERFV 527

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
             + E +KG  P WL+PIQA +  ++  A  +YA EI   L+   L +E D RNE + YK
Sbjct: 528 AYLTEVYKGAFPTWLAPIQATIIPVSVDAHGDYAYEIKERLQMKGLRVEVDDRNEKMGYK 587

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           IR    +KIP  ++ GDKE  + ++ +RR+GS  T
Sbjct: 588 IRASQTQKIPYQLVVGDKELEDATVNVRRYGSKET 622


>gi|212704422|ref|ZP_03312550.1| hypothetical protein DESPIG_02477 [Desulfovibrio piger ATCC 29098]
 gi|212672143|gb|EEB32626.1| hypothetical protein DESPIG_02477 [Desulfovibrio piger ATCC 29098]
          Length = 648

 Score =  521 bits (1342), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 266/612 (43%), Positives = 379/612 (61%), Gaps = 29/612 (4%)

Query: 24  SDVAESISRSLAKKAVAVAINGKV--------CDLSD--PVREGSIEIITPEDPRSLAVI 73
            DVA  + ++L+ K     +  +V        CDLS   P +   I  +  + P  L++I
Sbjct: 16  GDVAAVLQKALSGKKFKSVVAARVTAEGTETLCDLSATVPAQCTDITPVYADSPEGLSMI 75

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           RHS AH+MA AV+ ++P  +V IGP +E+GFYYDFD E+PFSS++   IE +MQ I+   
Sbjct: 76  RHSTAHVMAAAVKKLYPSAKVTIGPAVENGFYYDFDVEKPFSSEDFPAIEAEMQRIVNER 135

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQ 193
            PF++  +S   A E F    E +KVEI+E I   + V+LY  G++ DLCRGPHV  TG 
Sbjct: 136 LPFVRTTMSKADAIEKFSKMGENFKVEIIEGIEG-DTVSLYTCGDFTDLCRGPHVPHTG- 193

Query: 194 VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREM 253
             K  K++  AGAYWRGD   PMLSR+YGTA+  ++ L  YL  LEE+++RDHRKL RE+
Sbjct: 194 FSKASKILSAAGAYWRGDEKNPMLSRLYGTAFADEKALNAYLKQLEEAKRRDHRKLGREL 253

Query: 254 DLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHW 311
             F   ED   G++FW  KG  +   L  + RR+ IK +Y+ +  PQ+L    WQ+SGH+
Sbjct: 254 GFFTFHEDVAPGMVFWLPKGMMMRTILEDFWRREHIKRNYDLVQGPQLLRVETWQRSGHY 313

Query: 312 DSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRN 371
           D YR NM+  +  DD       + +KPMNC  H+ ++ + L+SYR+LP R  E G V+R+
Sbjct: 314 DHYRQNMYFTQIEDDQ------YGIKPMNCISHMLIYRNDLRSYRDLPQRYFELGVVHRH 367

Query: 372 EPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP 431
           E SG+LHGL+RVR FTQDDAH+ CT EQ+  E L + +LI  +   FGF+   V +STRP
Sbjct: 368 EKSGTLHGLLRVRQFTQDDAHILCTPEQLEGEILGVIHLIRDLMHLFGFD-YKVGISTRP 426

Query: 432 EKRVGSDALWDDAENIMKGVLDTIKNSSQD-RINTGVLLGEGAFYGPKFEYILKDAIGRD 490
           +  +G+D  W+ A N +   ++ +K +     IN G    +GAFYGPK +  L D IGR+
Sbjct: 427 KDSIGTDEAWELATNAL---IEAVKKADMPYEINEG----DGAFYGPKIDVRLLDCIGRE 479

Query: 491 WQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL 550
           WQC TIQVDF LP RF+  YV    E+  PVM+HRA+ GS+ERFIG++IE + G +P WL
Sbjct: 480 WQCSTIQVDFTLPERFDLTYVGQDGERHRPVMVHRAIMGSLERFIGVLIEQYAGAMPTWL 539

Query: 551 SPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           +P QA + T+T +  E A +    LK+  + +  D RNE + +K+RE  + K+P I++ G
Sbjct: 540 APEQARILTVTDAHNEAALKACEELKALGIRVTADTRNEKLGFKVREAQLAKVPYILVVG 599

Query: 611 DKEASERSIGIR 622
           +KEA    + +R
Sbjct: 600 EKEAQAGGVNVR 611


>gi|257875532|ref|ZP_05655185.1| threonyl-tRNA synthetase [Enterococcus casseliflavus EC20]
 gi|257809698|gb|EEV38518.1| threonyl-tRNA synthetase [Enterococcus casseliflavus EC20]
          Length = 646

 Score =  521 bits (1342), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 262/634 (41%), Positives = 405/634 (63%), Gaps = 23/634 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPE 65
           +TFPDG+ K F V  T  ++AESIS+SLAKKA+A  +NG++ DLS P+ E  +IEI+TP+
Sbjct: 5   ITFPDGAKKEFAVGVTTKEIAESISKSLAKKALAGKVNGQLIDLSRPIEEDATIEIVTPD 64

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQIEK 124
              +L ++RHS AH+MA+A++ ++P +   +GP I+ GFYYD D  E P ++++L  IE 
Sbjct: 65  HEDALGLLRHSTAHLMAQAMRRLYPSIHFGVGPAIDSGFYYDTDNGENPVTAEDLPAIEA 124

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
           +M +II  + P  ++ L+ E+A  LF   ++ YKVE++  +P  E +T Y+QGE+ DLCR
Sbjct: 125 EMMKIIKENLPIERRVLTKEEALTLF--AEDPYKVELITELPDDETITAYQQGEFVDLCR 182

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV STG+++  +KL+ VAGAYWRG S+  M+ R+YGTA+  +++L +++   EE+++R
Sbjct: 183 GPHVPSTGRIQ-VYKLLSVAGAYWRGSSDNQMMQRVYGTAFFDKKDLKEFIRLREEAKER 241

Query: 245 DHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQ 302
           DHRKL +E++LF ++ E G+G+ FW  KG  I +T+  Y+  ++I   Y+ + TP + + 
Sbjct: 242 DHRKLGKELELFMLSPEVGAGLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIMANV 301

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            L++ SGHWD Y  +MF        + D     L+PMNCP H+ V+ + + SYRELP+R+
Sbjct: 302 DLYKTSGHWDHYHEDMFPPM----DMGDGEMLVLRPMNCPHHMMVYKNDIHSYRELPIRI 357

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AE G ++R E SG+L GL RVR  T +D H F   +Q+  E  +  +L+I +Y+DF    
Sbjct: 358 AELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKEEFKRTLDLMIGVYEDFNITD 417

Query: 423 IMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
              +LS R     +K    DA+W++A+ ++K  +D ++      ++     GE AFYGPK
Sbjct: 418 YRFRLSYRDPQNKDKYFDDDAMWENAQTMLKAAMDELE------LDYFEAEGEAAFYGPK 471

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH-PVMIHRAVFGSIERFIGI 537
            +  +K A+G +    TIQ+DF LP RF+  YV    E  H PV+IHR +  ++ERF+  
Sbjct: 472 LDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENNHRPVVIHRGIVSTMERFVAY 531

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           + E +KG  P WL+PIQA +  ++  A  +YA EI   L++  L +E D RNE + YKIR
Sbjct: 532 LTEVYKGAFPTWLAPIQASIIPVSVEAHSDYAYEIKERLQAQGLRVEVDDRNEKMGYKIR 591

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
               +KIP  I+ GD+E ++ ++ IRR+GS  TQ
Sbjct: 592 ASQTQKIPYQIVVGDQEVNDATVNIRRYGSKETQ 625


>gi|125718378|ref|YP_001035511.1| threonyl-tRNA synthetase [Streptococcus sanguinis SK36]
 gi|166225508|sp|A3CP56|SYT_STRSV RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|125498295|gb|ABN44961.1| Threonyl-tRNA synthetase, putative [Streptococcus sanguinis SK36]
          Length = 647

 Score =  521 bits (1342), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 259/640 (40%), Positives = 408/640 (63%), Gaps = 23/640 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  + E G+IEI+T
Sbjct: 2   IKITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGAIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQI 122
           P+   +L ++RHS AH+ A+A + ++P++ + +GP I+DGFYYD D E    S+++L +I
Sbjct: 62  PDHEDALDILRHSAAHLFAQAARRLFPDIHLGVGPAIQDGFYYDTDNEAGQISNEDLPRI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWFD 181
           E++M++I+  + P +++ ++ ++ARE+F  K + YK+E++E     E  +T+YRQ E+ D
Sbjct: 122 EEEMKKIVKENFPSIREEVTKDEAREIF--KNDPYKLELIEEHSEDEGGLTIYRQSEYVD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++  F L+ VAGAYWRG+S+  M+ R+YGTAW  +++L +YL   EE+
Sbjct: 180 LCRGPHVPSTGRIQ-IFHLLNVAGAYWRGNSDNAMMQRVYGTAWFDKKDLKKYLQMREEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+++ G G+ FW   G  + + L  Y+  +++   Y+ + TP +
Sbjct: 239 KERDHRKLGKELDLFMISQEVGQGLPFWLPNGATVRRELERYIVDKELASGYQHVYTPPL 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHW+ Y+ +MF        + D   F L+PMNCP H+ V+ H + SYRELP
Sbjct: 299 ASVELYKTSGHWEHYQEDMFPTM----DMGDGEEFVLRPMNCPHHIQVYKHHVHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y DF 
Sbjct: 355 IRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYADFN 414

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
             +   +LS R      K   +D +W++A+ +++  LD +       ++     GE AFY
Sbjct: 415 LTEYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDFFEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G +    TIQ+DF LP RF+  YV +  E+  PVMIHR V  ++ERF 
Sbjct: 469 GPKLDIQVKTALGNEETLSTIQLDFLLPERFDLKYVGADGEEHRPVMIHRGVISTMERFT 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IEN+KG  P WL+P Q  +  +++ A ++YA ++A  L+   +  + D RNE + YK
Sbjct: 529 AILIENYKGAFPTWLAPHQVTLIPVSNEAHIDYAWQVAKKLRDKGVRADVDERNEKMQYK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           IR     KIP  +I GDKE  + ++ +RR+G   T  V++
Sbjct: 589 IRASQTSKIPYQLIVGDKEVEDGTVNVRRYGQKETHTVAV 628


>gi|325848534|ref|ZP_08170194.1| threonine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
 gi|325480762|gb|EGC83819.1| threonine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
          Length = 641

 Score =  521 bits (1342), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 259/645 (40%), Positives = 397/645 (61%), Gaps = 20/645 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           IK+  PD S+K +    +  DV + IS  L + AV   +NGKV   ++P+ E S  +++ 
Sbjct: 2   IKIKLPDESVKEYEKGVSVGDVTKDISEGLFRSAVGAVVNGKVMGYAEPINEDSDFKVVK 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            ED     +  H+ +H+MA A++ +WPE + AIGP I++GFYYD D E  F  ++L +IE
Sbjct: 62  FEDKEGKEIFWHTSSHVMAAAIKEMWPEAKFAIGPAIDNGFYYDIDLEHRFVPEDLPKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE--WFD 181
            KM+EI  +D   +++ +S  +A E F+ + + YKVE++E +P  E +TLY  G+  + D
Sbjct: 122 AKMKEIAKKDLKMIRKEISRAEALEYFKKENQEYKVELIEDLPEDEIITLYEMGDDVFVD 181

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LC+GPH+ ST  +K   KL  +AGAYWRGDS+R ML RIYG ++  +++L +Y+   EE+
Sbjct: 182 LCKGPHLLSTKAIKAV-KLNSIAGAYWRGDSDRKMLQRIYGISFEKKKQLDEYIKLQEEA 240

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVL 300
           ++RDHR++ +EM+LF   E+  G  F+   G  +   L+++    + ++ Y EI TP ++
Sbjct: 241 KRRDHRRIGKEMNLFSFHEEAPGFPFFKENGMILRHELLNWWTDVLAENGYGEIQTPLIM 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ LW +SGHWD Y+ NM+  K       D   +A+KPMNCPG V V+     SYR+LP+
Sbjct: 301 NEELWHRSGHWDHYKENMYFTKI------DGENYAVKPMNCPGSVLVYGEEPHSYRDLPI 354

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLAE+G V+R+E SG+LHGL RVR FTQDDAHV+C   Q+ +E  K+ +L   +Y  FGF
Sbjct: 355 RLAEYGQVHRHELSGALHGLFRVRTFTQDDAHVYCLPSQVKDEVFKMIDLADLLYSTFGF 414

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD-RINTGVLLGEGAFYGPKF 479
            K  ++LSTRP+  +G    WD AE   K + D +K    D +IN      +GAFYGPK 
Sbjct: 415 -KYKIELSTRPDDFMGKIEEWDFAE---KALEDALKERGIDYQINPK----DGAFYGPKI 466

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           ++ L+DA  R WQCGTIQ+DF LP  F+  Y++ + EK  PVM+HRA+ GS+ERFIG + 
Sbjct: 467 DFHLEDAAKRTWQCGTIQLDFQLPQNFDLTYIDENGEKKRPVMLHRALLGSVERFIGSVT 526

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E F G  PLW++P Q  +  ++    ++A ++A  +K     ++ D R+E + YKIR+  
Sbjct: 527 EQFAGRFPLWINPKQVAIIPVSDKFADFADDLAKKIKKAGYRVDVDHRSEGVGYKIRQAQ 586

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           + +   +++ G+ E     + +R      T+ VS  + I  L +E
Sbjct: 587 LMRTNYMLVVGENEEKSGKLTVRNRDGEETKDVSFEEFIEKLNQE 631


>gi|146319020|ref|YP_001198732.1| threonyl-tRNA synthetase [Streptococcus suis 05ZYH33]
 gi|146321228|ref|YP_001200939.1| threonyl-tRNA synthetase [Streptococcus suis 98HAH33]
 gi|253752085|ref|YP_003025226.1| threonyl-tRNA synthetase [Streptococcus suis SC84]
 gi|253753910|ref|YP_003027051.1| threonyl-tRNA synthetase [Streptococcus suis P1/7]
 gi|166225507|sp|A4W2F0|SYT_STRS2 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|166225509|sp|A4VW43|SYT_STRSY RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|145689826|gb|ABP90332.1| Threonyl-tRNA synthetase [Streptococcus suis 05ZYH33]
 gi|145692034|gb|ABP92539.1| Threonyl-tRNA synthetase [Streptococcus suis 98HAH33]
 gi|251816374|emb|CAZ52005.1| threonyl-tRNA synthetase [Streptococcus suis SC84]
 gi|251820156|emb|CAR46495.1| threonyl-tRNA synthetase [Streptococcus suis P1/7]
 gi|292558668|gb|ADE31669.1| Threonyl-tRNA synthetase [Streptococcus suis GZ1]
 gi|319758452|gb|ADV70394.1| threonyl-tRNA synthetase [Streptococcus suis JS14]
          Length = 650

 Score =  521 bits (1341), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 263/640 (41%), Positives = 403/640 (62%), Gaps = 23/640 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+TFPDG+++ +    T  ++AESIS+SLAKKA+A   NGK+ D +  + E G++EI+ 
Sbjct: 2   IKITFPDGAVREYQAGVTTFEIAESISKSLAKKALAGKFNGKLIDTTRAIDEDGTLEIVM 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQI 122
           P+   +L ++RHS AH+ A+A + ++P++++ +GP I+DGFYYD D      S+++L +I
Sbjct: 62  PDHDDALDILRHSAAHLFAQAARRLFPDIKLGVGPAIQDGFYYDTDNAAGQISNEDLPRI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWFD 181
           +++M +I+  + P  ++ ++ E+A E+F  K + YK+E++      E  +T+Y QGE+ D
Sbjct: 122 QEEMMKIVKENFPSERREVTKEEALEIF--KNDPYKLELIHEHSDDEGGLTIYTQGEYVD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++  F+L+ VAGAYWRG S  PM+ R+YGTAW  +++L  YL   EE+
Sbjct: 180 LCRGPHVPSTGRIQ-IFELLNVAGAYWRGKSENPMMQRVYGTAWFDKKDLKAYLQMREEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+++ G G+ FW   G  I +TL  Y+  K +   Y+ + TP +
Sbjct: 239 KERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRTLERYITDKELASGYQHVYTPPL 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHW+ Y  +MF        + D   F L+PMNCP H+ V+ + ++SYRELP
Sbjct: 299 ASVELYKTSGHWEHYSEDMFPTM----DMGDGEEFVLRPMNCPHHIQVYKNHVRSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           VR+AE G ++R E SG+L GL RVR  T +D H+F T EQ+  E  K   LII +Y DF 
Sbjct: 355 VRIAELGMMHRYEKSGALTGLQRVREMTLNDGHIFVTPEQIQEEFKKALQLIIDVYADFN 414

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R     EK   +D +W++A+ ++KG +D +       ++     GE AFY
Sbjct: 415 LNDYRFRLSYRDPEDKEKYYDNDEMWENAQRMLKGAMDEMG------VDYFEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G +    TIQ+DF LP RF   Y+ +  E+  PVMIHR V  ++ERF 
Sbjct: 469 GPKLDIQVKTALGNEETLSTIQLDFLLPERFGLTYIGADGEEHRPVMIHRGVISTMERFT 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IE +KG  P WL+P Q  +  I+  A ++YA ++A  L+   + +  D RNE + YK
Sbjct: 529 AILIETYKGAFPTWLAPTQVTMIPISVEAHLDYAWKVAKELQDRGVRVHVDERNEKMQYK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           IR+    KIP  +I GDKE  + ++ +RR+GS  TQ  S+
Sbjct: 589 IRQSQTSKIPYQLIVGDKEMEDNAVNVRRYGSKATQTQSV 628


>gi|172036410|ref|YP_001802911.1| threonyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
 gi|171697864|gb|ACB50845.1| threonyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
          Length = 666

 Score =  521 bits (1341), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 264/594 (44%), Positives = 365/594 (61%), Gaps = 45/594 (7%)

Query: 62  ITP---EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           +TP   +D + L  IRH+CAH++  AVQ+++PE +V IGP  E GFYYDFD+  PF+ ++
Sbjct: 56  LTPLLDKDRQQLVKIRHTCAHVLGMAVQTLFPETKVTIGPWTETGFYYDFDRLTPFTPED 115

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           + +IE +M+ II  + P +++ +   + +       E YK+EILESIP  E++T Y  G 
Sbjct: 116 MKKIEGEMRRIIKANLPIIREVVDRAEIQTEIAELNEPYKLEILESIPETESITRYFIGS 175

Query: 179 --------------------------WFDLCRGPHVRSTGQVK-KFFKLMKVAGAYWRGD 211
                                     W+DLC GPH+  TG++  + F L  VAGAYW+GD
Sbjct: 176 PDGGRGNIPEQQPSLINPVLVPPDTCWWDLCAGPHLNFTGEIHPEAFALESVAGAYWQGD 235

Query: 212 SNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHR 270
            ++P L RIYGTAW T ++L  YL   EE+++RDHRKL +++ LF I ED G G++FWH 
Sbjct: 236 ESKPQLQRIYGTAWETPEQLQAYLTQKEEAQRRDHRKLGQQLKLFSIQEDAGGGLVFWHP 295

Query: 271 KGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
           +G  +   +  Y R   ++D Y+ + TP V +  LW+ SGHWD YR NMF     +    
Sbjct: 296 RGAMMRYLIEDYWRNAHLEDGYQFLYTPHVANLDLWKTSGHWDFYRENMFEAMAVEH--- 352

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
             +T+ +KPMNCP HV  +   L SYRE P++ AE G+VYR E SG LHGLMRVRGFTQD
Sbjct: 353 --QTYQIKPMNCPFHVLTYKDDLHSYREFPLKWAELGTVYRYEKSGVLHGLMRVRGFTQD 410

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA-ENIM 448
           DAH+FC  EQ+ +E L + NL   I  DFGF    V LSTRPEK VGSD +W  A E ++
Sbjct: 411 DAHIFCLPEQIADEILGVLNLTEKILSDFGFTDYEVNLSTRPEKSVGSDQVWQLATEALI 470

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
           K + +   N  +DR       G GAFYGPK +  +KDAIGR WQC TIQVDFNLP RF  
Sbjct: 471 KALNNKQWNYLEDR-------GGGAFYGPKIDIKIKDAIGRLWQCSTIQVDFNLPERFGM 523

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYA 568
            YV +   +  P+MIHRA+FGS+ERF GI+IEN+ G+ PLWL+PIQ  +  ++    +YA
Sbjct: 524 EYVAADGSRQQPIMIHRAIFGSLERFFGILIENYAGDFPLWLAPIQLRLLPVSDEQQDYA 583

Query: 569 QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           + +A  LK     +E D   E +  +IR   ++KIP++ I G +E   +++ IR
Sbjct: 584 KTVAIRLKKAGYRVEVDTSGERLGKQIRLSELEKIPVVAIVGKREVESQTLSIR 637


>gi|332358692|gb|EGJ36515.1| threonine--tRNA ligase [Streptococcus sanguinis SK355]
          Length = 647

 Score =  521 bits (1341), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 258/640 (40%), Positives = 408/640 (63%), Gaps = 23/640 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  + E G+IEI+T
Sbjct: 2   IKITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGAIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQI 122
           P+   +L ++RHS AH+ A+A + ++P++ + +GP I+DGFYYD D E    S+++L +I
Sbjct: 62  PDHEDALDILRHSAAHLFAQAARRLFPDIHLGVGPAIQDGFYYDTDNEAGQISNEDLPRI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWFD 181
           E++M++I+  + P +++ ++ ++AR++F  K + YK+E++E     E  +T+YRQGE+ D
Sbjct: 122 EEEMKKIVKENFPSIREEVTKDEARDIF--KNDPYKLELIEEHSEDEGGLTIYRQGEYVD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++  F L+ VAGAYWRG+S+  M+ R+YGTAW  +++L +YL   EE+
Sbjct: 180 LCRGPHVPSTGRIQ-IFHLLNVAGAYWRGNSDNAMMQRVYGTAWFDKKDLKKYLQMREEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+++ G G+ FW   G  + + L  Y+  +++   Y+ + TP +
Sbjct: 239 KERDHRKLGKELDLFMISQEVGQGLPFWLPNGATVRRELERYIVDKELASGYQHVYTPPL 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHW+ Y+ +MF        + D   F L+PMNCP H+ V+ H + SYRELP
Sbjct: 299 ASVELYKTSGHWEHYQEDMFPTM----DMGDGEEFVLRPMNCPHHIQVYKHHVHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y DF 
Sbjct: 355 IRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYADFN 414

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
             +   +LS R      K   +D +W++A+ +++  LD +       ++     GE AFY
Sbjct: 415 LTEYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G +    TIQ+DF LP RF+  YV +  E+  PVMIHR V  ++ERF 
Sbjct: 469 GPKLDIQVKTALGNEETLSTIQLDFLLPERFDLKYVGADGEEHRPVMIHRGVISTMERFT 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IEN+KG  P WL+P Q  +  +++ A ++YA ++A  L+   +  + D RNE + YK
Sbjct: 529 AILIENYKGAFPTWLAPHQVTLIPVSNEAHIDYAWQVAKKLRDKGVRADVDERNEKMQYK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           IR     KIP  +I GDKE  + ++ +RR+G   T  + +
Sbjct: 589 IRASQTSKIPYQLIVGDKEVEDGTVNVRRYGQKETHTIPV 628


>gi|115446545|ref|NP_001047052.1| Os02g0538000 [Oryza sativa Japonica Group]
 gi|50251985|dbj|BAD27919.1| putative threonyl-tRNA synthetase [Oryza sativa Japonica Group]
 gi|50252661|dbj|BAD28830.1| putative threonyl-tRNA synthetase [Oryza sativa Japonica Group]
 gi|113536583|dbj|BAF08966.1| Os02g0538000 [Oryza sativa Japonica Group]
 gi|215765092|dbj|BAG86789.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222623006|gb|EEE57138.1| hypothetical protein OsJ_07040 [Oryza sativa Japonica Group]
          Length = 674

 Score =  521 bits (1341), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 262/571 (45%), Positives = 376/571 (65%), Gaps = 18/571 (3%)

Query: 56  EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFS 115
           E  + + T E    L  IRH+CAH+MA AVQ ++P  +V IGP I++GFYYDFD E P +
Sbjct: 88  EERVVLPTNESSDRLLRIRHTCAHVMAMAVQKLFPNSKVTIGPWIDNGFYYDFDME-PLT 146

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
             +L +I+K+M  II ++ P +++ +S E+A++  E+  E YK+EILE I  ++ +T+Y 
Sbjct: 147 DKDLKRIKKEMDRIIRKNLPLVREEVSREEAQKRIEALNEPYKLEILEGI-KEDPITIYH 205

Query: 176 QGE-WFDLCRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQ 233
            GE W+DLC GPHV STG++ ++  +L  VAGAYWRGD +  ML RIYGTAW T+ +L  
Sbjct: 206 IGEEWWDLCAGPHVESTGKIDRRAVELESVAGAYWRGDESNQMLQRIYGTAWETEDQLKA 265

Query: 234 YLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTL-ISYMRRKIKDDY 291
           Y++F EE+++RDHR+L  ++DLF I ED G G++FWH KG  I   L  S+ +  ++  Y
Sbjct: 266 YIHFKEEAKRRDHRRLGLDLDLFSIQEDAGGGLVFWHPKGAIIRHVLEDSWKQIHLQRGY 325

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           + + TP V    LW+ SGH D Y+ NM+     +D +     + L+PMNCP H+ V+   
Sbjct: 326 DLLYTPHVAKAELWKVSGHIDFYKENMYNQMDVEDEL-----YQLRPMNCPYHILVYKRK 380

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI 411
           L SYR+ P+R+AE G+VYR E SGSLHGL RVRGFTQDDAH+FC ++Q+ +E   + +L 
Sbjct: 381 LHSYRDFPIRVAELGTVYRYELSGSLHGLFRVRGFTQDDAHIFCLEDQIKDEIRGVLDLT 440

Query: 412 ISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
             I   FGF    + LSTRPEK VGSD +W+ A   +K  L+      + +++ G     
Sbjct: 441 EQILGQFGFRYYEINLSTRPEKSVGSDDIWEKATLALKDALED--KGWEYKVDEG----G 494

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
           GAFYGPK +  ++DA+GR WQC T+QVDFNLP RF+  YVNS+SEK  P+MIHRA+ GS+
Sbjct: 495 GAFYGPKIDLKIEDALGRKWQCSTVQVDFNLPERFDITYVNSNSEKKRPIMIHRAILGSL 554

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           ERF G++IE++ G+ PLWL+PIQA +  +T + ++Y  E+A+ LKS  +  E     E +
Sbjct: 555 ERFFGVLIEHYAGDFPLWLAPIQARILPVTDNELQYCNEVASELKSKGIRAEV-CHGERL 613

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIR 622
              IR    KK+P++ + G KE   R++ IR
Sbjct: 614 PKLIRNAETKKVPLMAVVGPKEVQARTLTIR 644


>gi|296084987|emb|CBI28402.3| unnamed protein product [Vitis vinifera]
          Length = 688

 Score =  520 bits (1340), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 269/585 (45%), Positives = 381/585 (65%), Gaps = 32/585 (5%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           I + T E    L  IRH+CAH+MA AVQ ++P+ +V IGP IE+GFYYDFD E P +  +
Sbjct: 95  IVLPTNESSERLLRIRHTCAHVMAMAVQKLFPDAKVTIGPWIENGFYYDFDME-PLTDKD 153

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR-QG 177
           L +I+K+M  II R+ P +++ +S ++A+    +  E YK+EIL+SI  ++ +T+Y   G
Sbjct: 154 LKRIKKEMDRIIGRNLPLIREEVSRDEAQRRIMAVNEPYKMEILDSI-QEDPITIYHIGG 212

Query: 178 EWFDLCRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           EW+DLC GPHV  TG + +K  +L  VAGAYWRGD  + ML RIYGTAW  +++L  YL+
Sbjct: 213 EWWDLCAGPHVEYTGNINRKAVELESVAGAYWRGDEKKQMLQRIYGTAWENEEQLKAYLH 272

Query: 237 FLEESEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLI--SYMRRKIKDDYEE 293
           F EE+++RDHR+L +++DLF I  E G G++FWH KG  I + +I  S+ +  I+  Y+ 
Sbjct: 273 FKEEAKRRDHRRLGQDLDLFSIQDEAGGGLVFWHPKG-AIVRRIIEDSWKKIHIEHGYDL 331

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           + TP V    LW+ SGH D YR NM++    +D +     + L+PMNCP H+ ++   L 
Sbjct: 332 LYTPHVARADLWKTSGHLDFYRENMYSQITIEDEL-----YQLRPMNCPYHILIYKRKLH 386

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYR+ P+R+AE G+VYR E SGSLHGL RVRGFTQDDAH+FC ++Q+ +E   + +L   
Sbjct: 387 SYRDFPIRVAELGTVYRYELSGSLHGLFRVRGFTQDDAHIFCLEDQIKDEIRGVLDLTEE 446

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           I   FGF K  V LSTRPEK VG+D +W+ A + ++  LD    S   RI+     G GA
Sbjct: 447 ILLQFGFSKYEVNLSTRPEKAVGADDIWEKATSALRDALDDKGWSY--RIDE----GGGA 500

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQ-----------VDFNLPSRFNAFYVNSHSEKCHPVM 522
           FYGPK +  ++DA+GR WQC TIQ           VDFNLP RF+  YV+S+SEK  P+M
Sbjct: 501 FYGPKIDLKIEDALGRKWQCSTIQANRLDLSFTKEVDFNLPQRFDITYVDSNSEKQRPIM 560

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSI 582
           IHRAV GS+ERF G++IE++ G+ PLWLSPIQA V  +T + +EY  E+ N LK++ +  
Sbjct: 561 IHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVTNKLKANGIRA 620

Query: 583 ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR-RFGS 626
           E     E +   IR    ++IP++ + G KE   +++ +R RFG 
Sbjct: 621 EV-CHGERLPKLIRNSEKQRIPLMAVVGPKEVETQTVTVRSRFGG 664


>gi|294508832|ref|YP_003572891.1| threonyl-tRNA synthetase, class IIa [Salinibacter ruber M8]
 gi|294345161|emb|CBH25939.1| threonyl-tRNA synthetase, class IIa [Salinibacter ruber M8]
          Length = 656

 Score =  520 bits (1339), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 273/645 (42%), Positives = 402/645 (62%), Gaps = 20/645 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEI 61
           + I +T PDGS    P   TG ++AESI   LA+ A+A+ +NG+V DL  PV E + IEI
Sbjct: 7   TSIDITLPDGSTHTHPAGTTGLEIAESIGAGLARDALAIKVNGEVRDLDRPVTEDAEIEI 66

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELA 120
           +T +D        HS AH+MAEA+Q+++P+V+  IGP I+ GFYYD D  +Q  S+DEL 
Sbjct: 67  LTWDDEEGKQTFWHSSAHLMAEALQTLYPDVKFTIGPPIDQGFYYDVDLGDQTLSADELE 126

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IE+KM E+  RD+ + +  +S   A E +E++   YK+E++E +  +  ++ Y QGE+ 
Sbjct: 127 AIEEKMLELARRDAAYERHEVSKADAIEHYEAEGNEYKLELIEGL-EEGEISFYEQGEFT 185

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ STG +K   KL+ VAGAYWRGD + P L+RIYG ++  Q+ L  +L    +
Sbjct: 186 DLCRGPHIPSTGDIKAP-KLLSVAGAYWRGDESNPQLTRIYGISFPKQKLLEDFLERRRK 244

Query: 241 SEKRDHRKLAREMDLFHIAED--GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTP 297
           +++RDHRKL  E++LF    +  G G+  W  KG  + QTL   +++ ++K  Y+ + TP
Sbjct: 245 AKERDHRKLGTELNLFTFDTEQVGPGLPMWLPKGTTLRQTLQEVLQQEQVKQGYKPVCTP 304

Query: 298 QVLDQHLWQQSGHWDSYRANMFA-VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
            +    L++ SGH+  Y  + F  +   +    +   + LKPMNCP HV ++ +   SYR
Sbjct: 305 HIGRLDLYRTSGHYPHYEDDQFPPMVTGEGDDGEEDGYLLKPMNCPHHVKIYQNDHHSYR 364

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +LPVRLAEFG+VYR E +G L GL RVRGFTQDDAH+FCT  Q+ +E   + +L + +  
Sbjct: 365 DLPVRLAEFGTVYRQEQTGELGGLTRVRGFTQDDAHIFCTPAQVKDEFKSVIDLTLKVLD 424

Query: 417 DFGFEKIMVKLSTR----PEKRVGSDALWDDAE-NIMKGVLDTIKNSSQDRINTGVLLGE 471
             GFE+   ++S R     EK  G DALW  AE +I + V +T  ++ ++        GE
Sbjct: 425 ALGFEEFEAQISLRDPDDTEKYTGRDALWTRAEQDIREAVAETDLDAYEEP-------GE 477

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
            AFYGPK +++++DA+GR WQ GTIQVD+NLP RF   YV+ H E+  PVMIHRA FGS+
Sbjct: 478 AAFYGPKLDFMVEDALGRAWQLGTIQVDYNLPERFELTYVDEHDERKRPVMIHRAPFGSL 537

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           ERFIG++IE+  GN P WL+P Q  +  +    V+YAQE+A  L++  + +E D  +ET+
Sbjct: 538 ERFIGVLIEHCGGNFPTWLAPTQVQIIPVGDDFVDYAQEVAATLRAEDVRVEIDTSDETV 597

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
            YKIRE   +K+P +++ G  E    ++ +R         VS+ D
Sbjct: 598 GYKIREAETQKVPYMLVVGGDEEEAGTVSVRSHADGPQGTVSVQD 642


>gi|325569916|ref|ZP_08145910.1| threonine--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
 gi|325157039|gb|EGC69207.1| threonine--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
          Length = 646

 Score =  520 bits (1338), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 260/634 (41%), Positives = 405/634 (63%), Gaps = 23/634 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPE 65
           +TFPDG+ K F V  T  ++AESIS+SLAKKA+A  +NG++ DLS P+ E  +IEI+TP+
Sbjct: 5   ITFPDGAKKEFAVGVTTKEIAESISKSLAKKALAGKVNGQLIDLSRPIEEDATIEIVTPD 64

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQIEK 124
              +L ++RHS AH+MA+A++ ++P +   +GP I+ GFYYD D  E P ++++L  IE 
Sbjct: 65  HEDALGLLRHSTAHLMAQAMRRLYPSIHFGVGPAIDSGFYYDTDNGENPVTAEDLPAIEA 124

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
           +M +II  + P  ++ L+ E+A  LF   ++ YKVE++  +P  E +T Y+QGE+ DLCR
Sbjct: 125 EMMKIIKENLPIERRVLTKEEALALF--AEDPYKVELITELPDDETITAYQQGEFVDLCR 182

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV STG+++  +KL+ VAGAYWRG S+  M+ R+YGTA+  +++L +++   EE+++R
Sbjct: 183 GPHVPSTGRIQ-VYKLLSVAGAYWRGSSDNQMMQRVYGTAFFDKKDLKEFIRLREEAKER 241

Query: 245 DHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQ 302
           DHRKL +E++LF ++ E G+G+ FW  KG  I +T+  Y+  +++   Y+ + TP + + 
Sbjct: 242 DHRKLGKELELFMLSPEVGAGLPFWLPKGATIRRTIERYIVDKEVSLGYQHVYTPIMANV 301

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            L++ SGHWD Y  +MF        + D     L+PMNCP H+ V+ + + SYRELP+R+
Sbjct: 302 DLYKTSGHWDHYHEDMFPPM----DMGDGEMLVLRPMNCPHHMMVYKNDIHSYRELPIRI 357

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AE G ++R E SG+L GL RVR  T +D H F   +Q+  E  +  +L++ +Y+DF    
Sbjct: 358 AELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKEEFKRTLDLMVGVYEDFNITD 417

Query: 423 IMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
              +LS R     +K    DA+W++A+ ++K  +D ++      ++     GE AFYGPK
Sbjct: 418 YRFRLSYRDPQNKDKYFDDDAMWENAQTMLKAAMDELE------LDYFEADGEAAFYGPK 471

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH-PVMIHRAVFGSIERFIGI 537
            +  +K A+G +    TIQ+DF LP RF+  YV    E  H PV+IHR +  ++ERF+  
Sbjct: 472 LDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENNHRPVVIHRGIVSTMERFVAY 531

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           + E +KG  P WL+PIQA +  ++  A  +YA EI   L++  L +E D RNE + YKIR
Sbjct: 532 LTEVYKGAFPTWLAPIQASIIPVSVEAHSDYAYEIKERLQAQGLRVEVDDRNEKMGYKIR 591

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
               +KIP  I+ GD+E ++ ++ IRR+GS  TQ
Sbjct: 592 ASQTQKIPYQIVVGDQEVNDATVNIRRYGSKETQ 625


>gi|242278821|ref|YP_002990950.1| threonyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
 gi|259516380|sp|C6BRH1|SYT_DESAD RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|242121715|gb|ACS79411.1| threonyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
          Length = 642

 Score =  520 bits (1338), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 262/604 (43%), Positives = 378/604 (62%), Gaps = 19/604 (3%)

Query: 23  GSDVAESISRSLAKKAVAVAINGKVCDLSD--PVREGSIEIITPEDPRSLAVIRHSCAHI 80
           G  + E++S+   K  V       + DL+   P     +E +  +    L VIRHS AH+
Sbjct: 17  GEVLKEALSKKQFKNVVVAKCGDTLLDLTTTVPADCTDLEPVMADSKEGLEVIRHSTAHL 76

Query: 81  MAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQY 140
           MAEAV+ ++P  +V IGP I  GFYYDFD E+PF+ ++L  IE +M   +  +  F ++ 
Sbjct: 77  MAEAVKKLFPTAKVTIGPSIASGFYYDFDYERPFTPEDLEAIEAEMLRRVGANEEFTREV 136

Query: 141 LSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKL 200
           LS   A + FE   E YK+E++  +  +E V++Y  GE+ DLCRGPHV  TG +K F KL
Sbjct: 137 LSSADALKKFEEMGEDYKIELINDL-GEETVSVYTNGEFADLCRGPHVARTGMLKAF-KL 194

Query: 201 MKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI-A 259
           + VAGAYWRGD NR  L RIYGTA+   + L ++L  +EE++KRDHRKL  ++DLF +  
Sbjct: 195 LSVAGAYWRGDENRQQLQRIYGTAFPDPKALKKHLAQIEEAKKRDHRKLGTQLDLFSVNP 254

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANM 318
           E G+G+  WH KG  I   L  + R++ +K  Y+ +  P +L + LW++SGH+D+YR NM
Sbjct: 255 EVGAGMTIWHPKGALIRAILEDFERKEHLKRGYQFVQGPLILKRELWEKSGHYDNYRENM 314

Query: 319 FAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLH 378
           +  +       D +++ +KPMNC  H+ VF   L+SYR+LP R  E G V+R+E SG LH
Sbjct: 315 YFTEI------DEQSYGIKPMNCLSHMLVFKSRLRSYRDLPQRYFEHGVVHRHEKSGVLH 368

Query: 379 GLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD 438
           GL+RVR FTQDDAH+ C  +Q+ +E + +   +  +   FGFE    ++ST+PEK +GSD
Sbjct: 369 GLLRVRTFTQDDAHLICRPDQLRDEIIGVAKFVGDVMGLFGFE-YEAEVSTKPEKAIGSD 427

Query: 439 ALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
             WD A   ++G L  +    +  IN G    +GAFYGPK + I+KDA+ R WQC TIQ 
Sbjct: 428 EDWDRATEALEGALKEM--GMEYSINEG----DGAFYGPKIDIIIKDALERRWQCATIQC 481

Query: 499 DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVT 558
           DF LP RF+  YV    E+  PVM+HR + GSIERFIG+++E+  G LP WLSP+QA + 
Sbjct: 482 DFTLPERFDLSYVGEDGERHRPVMLHRVILGSIERFIGVLLEHTGGALPAWLSPVQAKIL 541

Query: 559 TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERS 618
           T+T S  E+AQ++   L+   +  E D RNE + YK+RE  ++KIP +++ GDKE +  S
Sbjct: 542 TVTDSQNEFAQKVLQFLREKGIRAEVDDRNEKLGYKVREAQLEKIPYMLVIGDKEVAAES 601

Query: 619 IGIR 622
           + +R
Sbjct: 602 VNVR 605


>gi|75812508|ref|YP_320127.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Anabaena
           variabilis ATCC 29413]
 gi|75705264|gb|ABA24938.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Anabaena
           variabilis ATCC 29413]
          Length = 614

 Score =  520 bits (1338), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 261/589 (44%), Positives = 366/589 (62%), Gaps = 35/589 (5%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSD 117
           S E ++  D   L  IRH+CAHIMA AV+ ++P  +VA GP+ E+GFYYDFD     + D
Sbjct: 8   SQENLSQHDSDKLLRIRHTCAHIMAMAVKKVFPGTKVATGPVTENGFYYDFDCPVSITPD 67

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +L++IE +M+ II  + P +++ +  E+ R       E+YK+EIL+ IP  E +T Y  G
Sbjct: 68  DLSKIEDQMRRIIKANLPIIREEVQREEIRTEIAQLNESYKLEILDRIPEGETITRYFIG 127

Query: 178 E---------------------WFDLCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRP 215
                                 W+DLC GPH+  TG+++   FKL+ +AGAYW+GD  + 
Sbjct: 128 SPDTGKPESSLFITDIQPASNYWWDLCAGPHINFTGEIEPDAFKLLNIAGAYWQGDETKA 187

Query: 216 MLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWK 274
            L RIYG AW T+++L  YL   EE+ +RDHRKL +E++LF I ED G G++FWH KG  
Sbjct: 188 QLQRIYGIAWETKEQLQAYLKQREEALRRDHRKLGQELNLFSIQEDAGGGLVFWHPKGAI 247

Query: 275 IFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           I   +  Y R+  ++  Y+ + TP + +  LW+ SGH+D Y+ NMF     D    + + 
Sbjct: 248 IRYIIEDYWRKSHLESGYQLLYTPHIANLDLWKTSGHFDFYQENMF-----DSMDVENQA 302

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
           + +KPMNCP HV  + H L SYRELP+R AE G+VYR E SG+LHGLMRVRGFTQDDAHV
Sbjct: 303 YQIKPMNCPFHVLTYKHQLHSYRELPLRWAELGTVYRYERSGALHGLMRVRGFTQDDAHV 362

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
           FC   Q+ +E L + NL   I  DFGF+   V LSTRPEK VG+D +W+ A + ++  L+
Sbjct: 363 FCLPNQIADEILGVLNLTEQILSDFGFKNYEVNLSTRPEKSVGNDEVWELATSALRQALN 422

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS 513
           T         N  V  G GAFYGPK +  ++DAIGR WQC TIQVDFNLP RF+  Y+  
Sbjct: 423 T------KGWNYIVDEGGGAFYGPKIDIKIQDAIGRLWQCSTIQVDFNLPERFDMEYIAV 476

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIAN 573
              +  P+MIHRA+FGS+ERF GI+IEN+ G+ PLWL+P+Q  +  ++    EYAQ +  
Sbjct: 477 DGSRQRPIMIHRAIFGSLERFFGILIENYSGDFPLWLAPVQLRLLPVSDEVREYAQLVVI 536

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
            LK   + +ETD   E +  +IR   ++KIP++ + G KE   +++ +R
Sbjct: 537 SLKKAGIRVETDSSGERLGKQIRTAELEKIPVVAVVGKKEVENQNLSVR 585


>gi|311069390|ref|YP_003974313.1| threonyl-tRNA synthetase [Bacillus atrophaeus 1942]
 gi|310869907|gb|ADP33382.1| threonyl-tRNA synthetase [Bacillus atrophaeus 1942]
          Length = 643

 Score =  520 bits (1338), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 261/646 (40%), Positives = 416/646 (64%), Gaps = 20/646 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSI 59
           M   +K+TFPDG++K F    T  D+A SIS  L KK++A  +NG+  DL  P+ E G++
Sbjct: 1   MSDMVKITFPDGAVKEFAKGTTTEDIAASISPGLKKKSLAGKLNGQEIDLRTPINEDGTV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT      L ++RHS AH++A+A++ I+ +V+  +GP+IE+GFYYD + E+  + ++L
Sbjct: 61  EIITEGSEEGLQIMRHSTAHLLAQAIKRIYKDVKFGVGPVIENGFYYDVEMEEAITPEDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IEK+M++I+  + P +++ +S E+A+  F    +  K+E+L++IP  E V++Y QGE+
Sbjct: 121 PKIEKEMKKIVNANLPIVRKEVSREEAKARFAEIGDDLKLELLDAIPEGETVSIYEQGEF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRG HV STG++K+ FKL+ +AGAYWRGDSN  ML R+YGTA+  + +L ++L  LE
Sbjct: 181 FDLCRGVHVPSTGKIKE-FKLLSLAGAYWRGDSNNQMLQRVYGTAFFKKADLEEHLRLLE 239

Query: 240 ESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTP 297
           E+++RDHRKL +E+ LF  ++  G G+  W  KG  I + +  Y+  +++   YE + TP
Sbjct: 240 EAKERDHRKLGKELKLFANSQKVGQGLPLWLPKGATIRRVIERYIVDKELSLGYEHVYTP 299

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +  + L++ SGHW+ Y+  MF     D+      T AL+PMNCP H+ ++ + + SYRE
Sbjct: 300 VLGSKELYETSGHWNHYQDGMFPPIELDN-----ETLALRPMNCPHHMMIYKNDIHSYRE 354

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+ +E ++   LI  +Y+D
Sbjct: 355 LPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKDEFIRTVRLIQDVYED 414

Query: 418 FGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           FG      +LS R     EK    D +W+ A++++K  +D I +   +        GE A
Sbjct: 415 FGLNDYTFRLSYRDPEDTEKYFDDDEMWNKAQSMLKDAMDEIGSDYYE------AEGEAA 468

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  +K AIG++    T+Q+DF LP RF+  YV    ++  PV+IHR V  ++ER
Sbjct: 469 FYGPKLDVQVKTAIGKEETLSTVQLDFLLPERFDLTYVGEDGKQHRPVVIHRGVVSTMER 528

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETIN 592
           F+  +IE  KG LP WL+P+Q  V  ++ S  ++YA+++   L+   L +E D R+E I 
Sbjct: 529 FVAFLIEEHKGALPTWLAPVQFQVIPVSPSVHLDYAKKVQERLQREGLRVEVDIRDEKIG 588

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           YKIRE  ++KIP +++ GD+EA   ++ +R++G   ++ +SL D +
Sbjct: 589 YKIREAQMQKIPYMLVVGDQEAENGAVNVRKYGEQKSETISLDDFV 634


>gi|172054921|ref|YP_001806248.1| threonyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
 gi|171701202|gb|ACB54182.1| threonyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
          Length = 644

 Score =  520 bits (1338), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 270/616 (43%), Positives = 369/616 (59%), Gaps = 54/616 (8%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           +P  L  IRH+CAH+MA AVQ ++PE +V IGP    GFYYDFD+ QPF+ ++L +I K+
Sbjct: 34  NPEQLERIRHTCAHVMAMAVQILFPETKVTIGPTTNTGFYYDFDRPQPFAPEDLKKITKQ 93

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE------- 178
           M+ II  + P +++ ++ E+ +   E   E YK+EIL+SIP  E +T Y  G        
Sbjct: 94  MRFIIKANLPIIREEITREEIKAEIEQLGEPYKLEILDSIPEGETITRYYIGSPDGGRLP 153

Query: 179 --------------------------WFDLCRGPHVRSTGQVK-KFFKLMKVAGAYWRGD 211
                                     W+DLC GPH+  TG++    F L  VAGAYWRGD
Sbjct: 154 DVGEKLKTALPEPSLIKPVKIPATVSWWDLCAGPHINYTGEINPNAFALESVAGAYWRGD 213

Query: 212 SNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHR 270
             +  L RIYGTAW T ++L  YL   EE+++RDHRKL +E+ LF I E+ G G++FWH 
Sbjct: 214 ETKAQLQRIYGTAWETPEQLDAYLQQQEEAKRRDHRKLGKELKLFSIQENAGGGLVFWHP 273

Query: 271 KGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
           +G  +   +  Y R+  +   YE + TP V +  LW+ SGH+D YR NMF     D    
Sbjct: 274 RGATMRYLIEDYWRKAHLDGGYELLYTPHVANLELWKTSGHFDFYRENMF-----DSMDI 328

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
           + + + +KPMNCP HV  + + L SYRE P+R AE G+VYR E SG LHGLMRVRGFTQD
Sbjct: 329 EEQAYQIKPMNCPFHVLTYKNDLHSYREFPLRWAELGTVYRYERSGVLHGLMRVRGFTQD 388

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMK 449
           DAH+FC   Q+ +E L + NL   I  DFGF+   V LSTRPEK VG+D  W+ A    +
Sbjct: 389 DAHIFCLPTQIASEILGVLNLTEKILSDFGFKDYEVNLSTRPEKSVGTDEGWELA---TQ 445

Query: 450 GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAF 509
            +++ + + S + I      G GAFYGPK +  +KDAIGR WQC TIQVDFNLP RF+  
Sbjct: 446 ALVEALNSKSWEYIEDK---GGGAFYGPKIDIKIKDAIGRTWQCSTIQVDFNLPERFDME 502

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQ 569
           YV +   +  P+MIHRA+FGS+ERF GI+IEN+ G+ PLWL+PIQ  +  ++ +  EY +
Sbjct: 503 YVAADGSRQRPIMIHRAIFGSLERFYGILIENYAGDFPLWLAPIQLRLLPVSEAQREYGE 562

Query: 570 EIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRR-----F 624
            +   LK     +E D   E +  +IR   ++KIP++ I G+KE   +S+ IR       
Sbjct: 563 AVVATLKEAGYRVEIDCTGERLGKQIRNAELEKIPVVAIVGNKEVETQSLSIRTRQQGDI 622

Query: 625 GST--TTQKVSLLDAI 638
           G+   T  K SL DAI
Sbjct: 623 GTMDLTELKKSLDDAI 638


>gi|332292754|ref|YP_004431363.1| threonyl-tRNA synthetase [Krokinobacter diaphorus 4H-3-7-5]
 gi|332170840|gb|AEE20095.1| threonyl-tRNA synthetase [Krokinobacter diaphorus 4H-3-7-5]
          Length = 648

 Score =  519 bits (1337), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 265/630 (42%), Positives = 395/630 (62%), Gaps = 19/630 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           I +T PDG++K     AT  DVA+SIS  LA+  ++   NG+  + S P+ E GSI + T
Sbjct: 2   INITLPDGNVKQMDKGATPMDVAKSISEGLARNVISAKFNGQTVETSTPLTEDGSITLFT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQI 122
             D       RHS +H++A+A+  ++P  ++ IGP IE+GFYYD D  +Q  S  +   I
Sbjct: 62  WNDDEGKTAFRHSSSHVLAQAILKLYPGAKLTIGPAIENGFYYDVDLGDQTISDKDFKSI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E KM EI      F  + ++ ++A + ++++   +KVE++E++     +T     ++ DL
Sbjct: 122 EDKMLEIARGKHDFSLRSVTKQEALDKYKAEGNEFKVELIENL-EDGTITFCDHDDFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRG H+ +TG +K   K+M VAGAYWRGD N+P L+R+YGT++  Q++L +YL  +EE++
Sbjct: 181 CRGGHIPNTGIIKAV-KIMSVAGAYWRGDENKPQLTRVYGTSFPKQKDLKEYLELIEEAK 239

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           KRDHRKL +E++LF  ++  G G+  W  KG  + + L ++++  + K  YE + +P + 
Sbjct: 240 KRDHRKLGKELELFTFSQRVGQGLPLWLPKGAALRERLENFLKAAQKKQGYEMVVSPHIG 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            + L++ SGH++ Y A+ F       T  +   F LKPMNCP H  ++N    SY+ELP 
Sbjct: 300 QKELYETSGHYEKYGADSFQPIL---TPNEGEEFLLKPMNCPHHCEIYNSRPWSYKELPK 356

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R AEFG+VYR E SG LHGL RVRGFTQDDAH+FCT +Q+  E +K+ +L++ ++   GF
Sbjct: 357 RFAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCTPDQLDEEFMKVIDLVLYVFGSLGF 416

Query: 421 EKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           E    ++S R    PEK +G+D  W  AEN    +L+  K      +N  V  GE AFYG
Sbjct: 417 ENFTAQVSLRDPEKPEKYIGADENWVKAEN---AILNAAKAKG---LNYVVETGEAAFYG 470

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK ++++KDA+GR WQ GTIQVD+NLP RF   Y  S +E   PVMIHRA FGS+ERFI 
Sbjct: 471 PKLDFMVKDALGRSWQLGTIQVDYNLPERFELQYKGSDNEMHRPVMIHRAPFGSMERFIA 530

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           I++E+  GN PLWL P QA + T++    +YAQ +  LL++H +    D R ET+  KIR
Sbjct: 531 ILLEHTGGNFPLWLMPQQATILTLSEKYEKYAQNVLTLLENHEIRAIIDNRGETMGKKIR 590

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGS 626
           E  ++K+P +II G++E ++ +I +RR G 
Sbjct: 591 EAEMQKLPFMIIIGEQEENDGTISVRRHGG 620


>gi|314933837|ref|ZP_07841202.1| threonine--tRNA ligase [Staphylococcus caprae C87]
 gi|313653987|gb|EFS17744.1| threonine--tRNA ligase [Staphylococcus caprae C87]
          Length = 645

 Score =  519 bits (1337), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 261/630 (41%), Positives = 402/630 (63%), Gaps = 21/630 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           I + FPDG+ K F    T  D+A+SIS  L KKAVA   NG++ DL+ P+ E GSIEI+T
Sbjct: 4   INIQFPDGNSKEFDKGTTTEDIAQSISPGLRKKAVAGKFNGQMVDLTRPLEEDGSIEIVT 63

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P    +L V+RHS AH+MA+A++ ++ +V+  +GP++E GFYYDFD ++  SSD+  +IE
Sbjct: 64  PGSEEALEVLRHSTAHLMAQALKRLYGDVKFGVGPVVEGGFYYDFDMDEKVSSDDFEKIE 123

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K M++I+  +    ++ +S ++A+E F  K + YK+E++++IP  E+VTLY QGE+ DLC
Sbjct: 124 KTMKQIVNENYKIERKVVSRDEAKEFF--KDDPYKLELIDAIPEDESVTLYSQGEFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RG HV ST ++K+F KL+  AGAYWRGDSN  ML RIYGTA+  +++L  +L  LEE  +
Sbjct: 182 RGVHVPSTSKIKEF-KLLSTAGAYWRGDSNNKMLQRIYGTAFFDKKDLKAHLQMLEERRE 240

Query: 244 RDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLD 301
           RDHRK+ ++++LF  ++  G+G+  W   G  I + +  Y+  +++   Y+ + TP + +
Sbjct: 241 RDHRKIGKDLELFTNSQLVGAGLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLAN 300

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             L++ SGHWD Y+ +MF     D+T        L+PMNCP H+ ++N+   SYRELP+R
Sbjct: 301 VDLYKTSGHWDHYQDDMFPPMKLDET----EEMVLRPMNCPHHMMIYNNKPHSYRELPIR 356

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AE G+++R E SG++ GL RVRG T +D+H+F   +Q+  E  ++ N+I  +Y+DFGF+
Sbjct: 357 IAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVNMIQEVYEDFGFK 416

Query: 422 KIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
               +LS R     EK +  D +W+ AE+++K  +D +     + I      GE AFYGP
Sbjct: 417 DYTFRLSYRDPEDKEKYMDDDEMWNKAESMLKEAVDEMGLPYVEAI------GEAAFYGP 470

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  +K A+G++    T Q+DF LP RF   Y+ S  E+  PV+IHR V  ++ERF+  
Sbjct: 471 KLDVQVKTAMGKEETLSTAQLDFLLPERFELTYIGSDGEQHRPVVIHRGVVSTMERFVAF 530

Query: 538 MIENFKGNLPLWLSPIQA-IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           + E  KG  P WL+P Q  I+        +YA+++ + LKS  + +E D RNE + YKIR
Sbjct: 531 LTEETKGAFPTWLAPKQVEIIPVNVDLHYDYARQLQDELKSQGVRVEIDDRNEKMGYKIR 590

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGS 626
           E  ++KIP  I+ GDKE     + +R++GS
Sbjct: 591 EAQMQKIPYQIVVGDKEVENNEVNVRQYGS 620


>gi|193215696|ref|YP_001996895.1| threonyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110]
 gi|238692696|sp|B3QUU7|SYT_CHLT3 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|193089173|gb|ACF14448.1| threonyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110]
          Length = 659

 Score =  519 bits (1337), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 268/646 (41%), Positives = 408/646 (63%), Gaps = 16/646 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IKLT P+G ++ +P   TGS+VA SI + LA+ A+A+   GK+ DL+ P+++ G+IEI+T
Sbjct: 11  IKLTLPNGDVRAYPKGVTGSEVAASIGKRLAEDALAIKFGGKLKDLAFPIQQDGAIEIVT 70

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +     A+  HS +H+MA+A++ ++P  +   GP IE GFYYD   E  FS  +L +IE
Sbjct: 71  FDSDEGKALYWHSSSHLMAQAIEELFPGTKFGAGPSIETGFYYDVASEHRFSEADLREIE 130

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKE-AYKVEILE-SIPAKENVTLYRQGEWFD 181
            +M EI  RD    ++ LS E A E F++++E  +KVEILE ++     V++Y QGE+ D
Sbjct: 131 ARMLEISNRDLQIQREELSREAAIEYFKTRREDPFKVEILEDTLKDTPVVSIYHQGEFSD 190

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LC GPH  ST ++K   +L  ++G++WRGD++R  + RIYG ++ +++ L ++   +EE+
Sbjct: 191 LCSGPHFSSTSKLKAV-RLTSISGSFWRGDASRQQMQRIYGVSFPSEKLLKKHFSQIEEA 249

Query: 242 EKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQV 299
           +KRDHRKL  E++LF I+ E GSG+  W  KG  +   L S+++  + +  Y  + TP +
Sbjct: 250 KKRDHRKLGSELELFMISPEVGSGLPMWLPKGAILRNELESFLKDEQRRRGYLPVVTPHI 309

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +  L++ SGH+  Y  + F      D +     + LKPMNCP H  +++   +SYR+LP
Sbjct: 310 GNIELYKTSGHYPYYSDSQFPPLTFTDELGKEEQYLLKPMNCPHHHQIYSSKPRSYRDLP 369

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +RL EFG+VYR E SG L+GL+RVRGFTQDD+H++C ++Q+ +E  K  +L   ++K  G
Sbjct: 370 IRLTEFGTVYRYEQSGELNGLIRVRGFTQDDSHIYCRQDQLVDEICKAIDLTQFVFKTLG 429

Query: 420 FEKIMVKLSTR-PE---KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           F ++  +LS R PE   K  G++ +W  AE  +K   D ++      +N  + LGE +FY
Sbjct: 430 FAEVQTRLSLRDPENTSKYSGNNEVWVQAEQDLKDAADKMQ------LNYFIGLGEASFY 483

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++I++DAIGR WQ GT+QVD+ +P RF+  YV S  +K  PV+IHRA FGS+ERFI
Sbjct: 484 GPKIDFIVRDAIGRKWQLGTVQVDYVMPERFDLTYVGSDGQKHRPVVIHRAPFGSLERFI 543

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
           GI+IENF GN P+WLSP+Q +V  IT    +YA  +   L    +  E D R E +  KI
Sbjct: 544 GILIENFAGNFPVWLSPVQVMVLPITDDFRDYAHSVLQKLLDAGIRAEIDERGEKVGKKI 603

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           R+  IKKIP + + G+KE +  S+ +RR        + L +AI +L
Sbjct: 604 RDAEIKKIPYMFVVGEKEMAAASVAVRRHKEGDKGTMPLQEAIRLL 649


>gi|313885013|ref|ZP_07818765.1| threonine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
 gi|312619704|gb|EFR31141.1| threonine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
          Length = 651

 Score =  519 bits (1336), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 267/649 (41%), Positives = 408/649 (62%), Gaps = 22/649 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           IKLTFPDG+ K F    T  DVA SIS SL K A+A  ++G++ D   P+ ++G+IEIIT
Sbjct: 4   IKLTFPDGNQKEFDAGVTIEDVAGSISNSLKKAALAGKLDGQIIDFHQPIEQDGAIEIIT 63

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            + P +L ++RHS AH+MA+A++ ++PE+   +GP IE+GFYYD DK +  +  +L +IE
Sbjct: 64  DKSPEALDLLRHSTAHLMAQAMKRLYPEIHFGVGPAIENGFYYDTDKPEALTDADLPKIE 123

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M++I++++ P   + +S E+A ++F+   + YKVE++  +P  E +++Y QGE+ DLC
Sbjct: 124 KEMKKIVSQNYPIEGRVVSREEALDIFQD--DPYKVELINDLPENEEISVYTQGEFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RG HV STG++K  FKL+ +AGAYWRG+S+  M+ R+YGTA+  Q +L   L   EE+++
Sbjct: 182 RGGHVPSTGKIKA-FKLLSLAGAYWRGNSDNKMMQRVYGTAFFKQADLDAELKRREEAKE 240

Query: 244 RDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQVLD 301
           RDHRKL +E+ LF I+++ GSG+ FW  KG  I + +  Y M ++I   YE + TP +  
Sbjct: 241 RDHRKLGKELGLFMISQEAGSGLPFWLPKGATIRRVIERYIMDKEIALGYEHVYTPVMAK 300

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             L++ SGHW  Y+ +MF        + D     L+PMNCP H+ ++ + + SYRELP+R
Sbjct: 301 TDLYKTSGHWAHYKDDMFPPM----DMGDGEMLVLRPMNCPHHMLIYKNEIHSYRELPIR 356

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AE G ++R E SG+L GL RVR  T +D+H+F   +Q+ +E  ++ NLI  +Y+DF   
Sbjct: 357 IAELGMMHRYEKSGALSGLQRVREMTLNDSHIFVRPDQIKDEFKRVLNLIADVYEDFNIT 416

Query: 422 KIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
               +LS R     EK     A+W+ AE+++K  +D +     + I      GE AFYGP
Sbjct: 417 DYRFRLSYRDPEDKEKYFDDYAMWEKAESMLKEAMDELGLEYFEAI------GEAAFYGP 470

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH-PVMIHRAVFGSIERFIG 536
           K +   K AIG +    TIQ+DF LP RF+  YV    +  H PV+IHR V  ++ERF+ 
Sbjct: 471 KLDVQFKTAIGLEETMSTIQLDFLLPERFDLTYVGEDGQNTHRPVVIHRGVVSTMERFVA 530

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            +IE +KG  P WL+P+QAI+  ++     +  +EI + L+     +E D RNE + YKI
Sbjct: 531 YLIEEYKGAFPTWLAPVQAILLPVSPEHHGDRVEEIYHALQEAGFRVEMDLRNEKLGYKI 590

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           RE    KIP  I+ GD+E  + ++ IRR+G+  +  VSL D I +L ++
Sbjct: 591 REAQTSKIPYQIVIGDQEVEDGTVNIRRYGAQDSNSVSLEDFIALLNED 639


>gi|319400998|gb|EFV89217.1| threonyl-tRNA synthetase [Staphylococcus epidermidis FRI909]
          Length = 645

 Score =  519 bits (1336), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 264/637 (41%), Positives = 407/637 (63%), Gaps = 23/637 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I + FPDG+ K F    T  D+A+SIS  L KKAVA   NG++ DL+ P+ ++G+IEIIT
Sbjct: 4   INIQFPDGNTKEFDKGTTTEDIAQSISPGLRKKAVAGKFNGQLVDLTRPLEQDGTIEIIT 63

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P    +L V+RHS AH+MA+A++ ++ +V+  +GP+IE GFYYDFD E   SSD+  +IE
Sbjct: 64  PGSEEALEVLRHSTAHLMAQALKRLYGDVKFGVGPVIEGGFYYDFDMEDKVSSDDFDKIE 123

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K M++I+  +   +++ +S E+A++ F  K + YK+E++++IP  E+VTLY QGE+ DLC
Sbjct: 124 KTMKQIVNENHKIVREVVSKEEAKDFF--KDDPYKLELIDAIPDDESVTLYTQGEFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RG HV ST ++K+F KL+  AGAYWRG+S+  ML RIYGTA+  +++L  +L  LEE  +
Sbjct: 182 RGVHVPSTSKIKEF-KLLSTAGAYWRGNSDNKMLQRIYGTAFFDKKDLKAHLKMLEERRE 240

Query: 244 RDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLD 301
           RDHRK+ ++++LF   +  G+G+  W   G  I + +  Y+  +++   Y+ + TP + +
Sbjct: 241 RDHRKIGKDLELFTNNQLVGAGLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLAN 300

Query: 302 QHLWQQSGHWDSYRANMF-AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
             L++ SGHWD Y+ +MF A+K  +D         L+PMNCP H+ ++ +   SYRELP+
Sbjct: 301 VDLYKTSGHWDHYQEDMFPAMKLDED-----EAMVLRPMNCPHHMMIYKNKPHSYRELPI 355

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G+++R E SG++ GL RVRG T +D+H+F   +Q+  E  ++ N+I  +YKDFGF
Sbjct: 356 RIAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVNMIQDVYKDFGF 415

Query: 421 EKIMVKLSTR-PE---KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           E    +LS R PE   K    D +W+ AE+++K   D +  + ++ I      GE AFYG
Sbjct: 416 EDYRFRLSYRDPEDKHKYFDDDEMWEKAESMLKEASDELGLTYEEAI------GEAAFYG 469

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK +  +K A+G++    T Q+DF LP RF+  Y+    E+  PV+IHR V  ++ERF+ 
Sbjct: 470 PKLDVQVKTAMGKEETLSTAQLDFLLPERFDLTYIGQDGEQHRPVVIHRGVVSTMERFVA 529

Query: 537 IMIENFKGNLPLWLSPIQA-IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            + E  KG  P WL+P+Q  I+        +YA+ + + LKS  + +E D RNE + YKI
Sbjct: 530 FLTEETKGAFPTWLAPMQVEIIPVNVDLHYDYARLLQDELKSQGVRVEIDDRNEKMGYKI 589

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
           RE  +KKIP  I+ GDKE   + + +R++GS   + V
Sbjct: 590 REAQMKKIPYQIVVGDKEVENQEVNVRKYGSEKQESV 626


>gi|223044090|ref|ZP_03614129.1| threonyl-tRNA synthetase [Staphylococcus capitis SK14]
 gi|222442484|gb|EEE48590.1| threonyl-tRNA synthetase [Staphylococcus capitis SK14]
          Length = 645

 Score =  519 bits (1336), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 261/630 (41%), Positives = 402/630 (63%), Gaps = 21/630 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           I + FPDG+ K F    T  D+A+SIS  L KKAVA   NG++ DL+ P+ E GSIEI+T
Sbjct: 4   INIQFPDGNSKEFDKGTTTEDIAQSISPGLRKKAVAGKFNGQMVDLTRPLEEDGSIEIVT 63

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P    +L V+RHS AH+MA+A++ ++ +V+  +GP++E GFYYDFD ++  SSD+  +IE
Sbjct: 64  PGSEEALEVLRHSTAHLMAQALKRLYGDVKFGVGPVVEGGFYYDFDMDEKVSSDDFDKIE 123

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K M++I+  +    ++ +S ++A+E F  K + YK+E++++IP  E+VTLY QGE+ DLC
Sbjct: 124 KTMKQIVNENYKIERKVVSRDEAKEFF--KDDPYKLELIDAIPEDESVTLYSQGEFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RG HV ST ++K+F KL+  AGAYWRGDSN  ML RIYGTA+  +++L  +L  LEE  +
Sbjct: 182 RGVHVPSTSKIKEF-KLLSTAGAYWRGDSNNKMLQRIYGTAFFDKKDLKAHLQMLEERRE 240

Query: 244 RDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLD 301
           RDHRK+ ++++LF  ++  G+G+  W   G  I + +  Y+  +++   Y+ + TP + +
Sbjct: 241 RDHRKIGKDLELFTNSQLVGAGLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLAN 300

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             L++ SGHWD Y+ +MF     D+T        L+PMNCP H+ ++N+   SYRELP+R
Sbjct: 301 VDLYKTSGHWDHYQDDMFPPMKLDET----EEMVLRPMNCPHHMMIYNNKPHSYRELPIR 356

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AE G+++R E SG++ GL RVRG T +D+H+F   +Q+  E  ++ N+I  +Y+DFGF+
Sbjct: 357 IAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVNMIQEVYEDFGFK 416

Query: 422 KIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
               +LS R     EK +  D +W+ AE+++K  +D +     + I      GE AFYGP
Sbjct: 417 DYTFRLSYRDPEDKEKYMDDDEMWNKAESMLKEAVDEMGLPYVEAI------GEAAFYGP 470

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  +K A+G++    T Q+DF LP RF   Y+ S  E+  PV+IHR V  ++ERF+  
Sbjct: 471 KLDVQVKTAMGKEETLSTAQLDFLLPERFELTYIGSDGEQHRPVVIHRGVVSTMERFVAF 530

Query: 538 MIENFKGNLPLWLSPIQA-IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           + E  KG  P WL+P Q  I+        +YA+++ + LKS  + +E D RNE + YKIR
Sbjct: 531 LTEETKGAFPTWLAPKQVEIIPVNVDLHYDYARQLQDELKSQGVRVEIDDRNEKMGYKIR 590

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGS 626
           E  ++KIP  I+ GDKE     + +R++GS
Sbjct: 591 EAQMQKIPYQIVVGDKEVENNEVNVRQYGS 620


>gi|160902301|ref|YP_001567882.1| threonyl-tRNA synthetase [Petrotoga mobilis SJ95]
 gi|189083616|sp|A9BHF0|SYT_PETMO RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|160359945|gb|ABX31559.1| threonyl-tRNA synthetase [Petrotoga mobilis SJ95]
          Length = 640

 Score =  519 bits (1336), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 271/635 (42%), Positives = 416/635 (65%), Gaps = 23/635 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K+T+PD S++ F    T +++A+ IS  L + A+A  ING++ DL+ P+ ++ +I++IT
Sbjct: 2   VKITYPDNSVQEFKDGITPAEIAKGISEGLYRNAIAAEINGELKDLNTPIMQDSTIKLIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPE--VQVAIGPIIEDGFYYDFDKE-QPFSSDELA 120
            +D  +  + RH+ AHIMA+AV  I+ E  V++AIGP+IE+GFYYDFD E    S ++ +
Sbjct: 62  LDDEIAPKIYRHTMAHIMAQAVARIFGEDRVKLAIGPVIENGFYYDFDIEGHNLSEEDFS 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IE++M++II  D   +++ ++ ++A ELF  K + YK+E++E +  ++ +++Y QG+++
Sbjct: 122 KIEEEMKKIIKEDIKIIRKEVNKKEAIELF--KDQPYKLELIEEL-EEDTISVYFQGDFY 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ STG VK +FKL+ V+GAYWRGD    ML RIYGTA+  +++L  YL  +EE
Sbjct: 179 DLCRGPHLPSTGYVK-YFKLLSVSGAYWRGDEKNKMLQRIYGTAFPKKEQLDDYLNMIEE 237

Query: 241 SEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           +++RDHRKL  +++LF + +E   G+ F+   G  +   L++Y R+  K   Y E+ TPQ
Sbjct: 238 AKRRDHRKLGPKLNLFMLQSEMAPGMPFFLPNGKIVLNELMAYSRQVHKKYGYVEVETPQ 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +++  LW QSGHWD Y+ NMF  +  D         A+KPMNCPGH+ ++ +   SYR+L
Sbjct: 298 IMNIKLWHQSGHWDHYKENMFFTEKED------MPMAVKPMNCPGHILIYKNNFVSYRDL 351

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+ EFG V+R E SG LHGL RVR FTQDDAH+FC   QM  E +K+  L   I+  F
Sbjct: 352 PIRMFEFGKVHRYERSGVLHGLFRVRAFTQDDAHIFCMPSQMEEEIIKVIQLTNEIFSTF 411

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF K    LST PE  +G    W+ A + +K  L+  K++ + RI+ G    EGAFYGPK
Sbjct: 412 GF-KYEAILSTMPEDHMGDIESWERATDALKKALE--KSNMEYRIDEG----EGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++ + D++GR WQC TIQ+DF +P RF+  Y + +  +  PVMIHRA+FGS+ERF GI+
Sbjct: 465 IDFNVTDSLGRKWQCTTIQLDFQMPERFDMVYADENDAQKRPVMIHRAIFGSLERFFGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IENF G  P WLSP+Q  +  ++    E A++ + +L+   + +  +  + T+ YKIR  
Sbjct: 525 IENFAGEFPTWLSPVQVSILPVSEKFNEEAKKFSRILEQEGIRVYVNDSDATVGYKIRNE 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            +KK+P +I+ G+KE +  +I IR     T + VS
Sbjct: 585 QMKKVPYMIVFGEKEMNSDTINIRTRKGDTIENVS 619


>gi|86131542|ref|ZP_01050140.1| Threonyl-tRNA synthetase [Dokdonia donghaensis MED134]
 gi|85817987|gb|EAQ39155.1| Threonyl-tRNA synthetase [Dokdonia donghaensis MED134]
          Length = 647

 Score =  519 bits (1336), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 265/630 (42%), Positives = 393/630 (62%), Gaps = 19/630 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           I +T PDG++K     AT  DVA+SIS  LA+  ++   NG+  + S P+ E GSI + T
Sbjct: 2   INITLPDGNVKQIDKGATPMDVAKSISEGLARNVISAKFNGETVETSTPLTEDGSITLFT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQI 122
             D       RHS +H++A+A+  ++P  ++ IGP IE+GFYYD D  +Q  S  +  +I
Sbjct: 62  WNDEEGKTAFRHSSSHVLAQAILKLYPGAKLTIGPAIENGFYYDVDLGDQTISDKDFKKI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E KM EI      F  + ++ ++A + ++ +   +KVE++E++     +T     ++ DL
Sbjct: 122 EDKMLEIARGKHDFKMRSVTKQEALDKYKCEGNEFKVELIENL-EDGTITFCDHDDFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRG H+ +TG +K   K+M VAGAYWRGD N+P L+R+YGT++  Q++L QYL  LEE++
Sbjct: 181 CRGGHIPNTGIIKAV-KIMSVAGAYWRGDENKPQLTRVYGTSFPKQKDLKQYLELLEEAK 239

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           KRDHRKL +E++LF  ++  G G+  W  KG  + + L ++++  + K  YE + +P + 
Sbjct: 240 KRDHRKLGKELELFTFSQRVGQGLPLWLPKGAALRERLENFLKAAQKKQGYEMVVSPHIG 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            + L++ SGH+  Y A+ F       T  +   F LKPMNCP H  ++N    SY+ELP 
Sbjct: 300 QKELYETSGHYAKYGADSFQ---PIQTPNEGEEFLLKPMNCPHHCEIYNSRPWSYKELPK 356

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R AEFG+VYR E SG LHGL RVRGFTQDDAH+FCT +Q+  E +K+ +L++ ++   GF
Sbjct: 357 RFAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCTPDQLDEEFMKVIDLVLYVFGSLGF 416

Query: 421 EKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           E    ++S R    P+K +G D  W  AEN    +L+  K      +N  V  GE AFYG
Sbjct: 417 EDFTAQVSLRDPENPDKYIGEDENWVKAEN---AILNAAKAKG---LNYVVETGEAAFYG 470

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK ++++KDA+GR WQ GTIQVD+NLP RF   Y  S +E   PVMIHRA FGS+ERF+ 
Sbjct: 471 PKLDFMVKDALGRSWQLGTIQVDYNLPERFELQYKGSDNEMHRPVMIHRAPFGSMERFVA 530

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           I++E+  GN PLWL P QA + T++    +YAQ + NLL++H +    D R ET+  KIR
Sbjct: 531 ILLEHTGGNFPLWLMPQQATILTLSEKYEKYAQNVLNLLENHEIRALIDNRGETMGKKIR 590

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGS 626
           E  ++K+P ++I G++E  + +I +RR G 
Sbjct: 591 EAEMQKLPFMLIIGEQEEKDGTISVRRHGG 620


>gi|110638045|ref|YP_678253.1| threonyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406]
 gi|123354610|sp|Q11UK3|SYT_CYTH3 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|110280726|gb|ABG58912.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Cytophaga
           hutchinsonii ATCC 33406]
          Length = 645

 Score =  519 bits (1336), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 266/648 (41%), Positives = 403/648 (62%), Gaps = 19/648 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           IK+T PDGSI+ +    T   +A SIS  LA+  +A  +NG++ D S  +  + +++++T
Sbjct: 2   IKITLPDGSIREYEKGITSMGIALSISEGLARNVLAAKVNGEIWDASRAITSDSTVQLLT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQI 122
             D    +   HS AH++AEA+++++P  +  IGP IE GFYYD D  ++ FS D+   I
Sbjct: 62  WNDTEGKSTFWHSSAHLLAEALEALYPGTKFGIGPAIETGFYYDVDFGDRAFSQDDFENI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EKK+ E+  + + ++++ +S + A   F  K++ YK+++LE + +  ++T Y+QG + DL
Sbjct: 122 EKKVLELAKQKNAYIRKEISKKDAVAYFTDKQDPYKLDLLEGL-SDGSITFYKQGAFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+  TG +K   KLM VAGAYWRGD     L+RIYG  +  QQEL  YL  LEE++
Sbjct: 181 CRGPHIPDTGFIKAV-KLMSVAGAYWRGDEKSKQLTRIYGVTFPKQQELKDYLTILEEAK 239

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           KRDHRKL +E++LF  +E  G G+  W  KG  + + L +++++ +++  Y+ + TP + 
Sbjct: 240 KRDHRKLGKELELFAFSEKVGMGLPLWLPKGALLRERLENFLKKAQVRAGYQPVVTPHIG 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ L+  SGH+D Y  + F       T  +   F LKPMNCP H  ++    +SY++LP+
Sbjct: 300 NKQLYVTSGHFDKYGKDSFQPIF---TPHEGEQFLLKPMNCPHHCEIYKTKPRSYKDLPI 356

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R AEFG+VYR E SG LHGL RVRGFTQDDAH+FC  +Q+  E LK+ +L++ ++K  GF
Sbjct: 357 RFAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCRPDQVKEEFLKVIDLVLYVFKVLGF 416

Query: 421 EKIMVKLSTR-PE---KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
                ++S R PE   K +G D  W  AE  +      I+ S++  ++T   LGE AFYG
Sbjct: 417 NDYTAQISLRDPENKDKYIGEDEQWQKAEQAI------IEASAEKGLSTVTELGEAAFYG 470

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK ++++KDA+GR WQ GTIQVD+ LP+RF   Y  S ++K  PVM+HRA FGS+ERFI 
Sbjct: 471 PKLDFMVKDALGRKWQLGTIQVDYQLPNRFELEYTGSDNQKHRPVMLHRAPFGSLERFIA 530

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           ++IE+  GN PLWLSP Q  +  I+    +YAQ++ + L    +    D R+E I  KIR
Sbjct: 531 VLIEHVAGNFPLWLSPDQIAILPISEKFNDYAQDVYDRLLVKDIRGFIDNRDEKIGKKIR 590

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  +KK+P +++ G+KE +E  I IR+ G      + + D I     E
Sbjct: 591 DTEVKKVPFMLVIGEKEVNEGKIAIRKHGGEDLGSMLVEDFIQYFESE 638


>gi|67920215|ref|ZP_00513735.1| Threonyl-tRNA synthetase, class IIa [Crocosphaera watsonii WH 8501]
 gi|67857699|gb|EAM52938.1| Threonyl-tRNA synthetase, class IIa [Crocosphaera watsonii WH 8501]
          Length = 642

 Score =  519 bits (1336), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 265/594 (44%), Positives = 362/594 (60%), Gaps = 49/594 (8%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           +P  L  IRH+CAH+MA AVQ ++PE +V IGP  + GFYYDFD+ QPF+ +EL +I K+
Sbjct: 32  NPEKLERIRHTCAHVMAMAVQILFPETKVTIGPTTDKGFYYDFDRPQPFAPEELKKITKQ 91

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE------- 178
           M+ II  + P +++ ++ E+ +   E   E YK+EIL+SIP  E +T Y  G        
Sbjct: 92  MRFIIKANLPIIREEITREEMKAEIEQLGEPYKLEILDSIPEGETITRYYIGSTDGDGLP 151

Query: 179 --------------------------WFDLCRGPHVRSTGQVK-KFFKLMKVAGAYWRGD 211
                                     W+DLC G H+  TG++  K F L  VAGAYWRGD
Sbjct: 152 NVGQKLKDALPEPSSIKPVKIPSTVSWWDLCAGHHINYTGEINPKAFALESVAGAYWRGD 211

Query: 212 SNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHR 270
             +  L RIYGTAW T ++L  YL   EE+++RDHRKL +E+ LF I E+ G G++FWH 
Sbjct: 212 ETKAQLQRIYGTAWETPEQLDAYLKQREEAKRRDHRKLGKELKLFSIQENAGGGLVFWHP 271

Query: 271 KGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
           +G K+   +  Y R+   D  YE + TP V +  LW+ SGH+D YR NMF      D++K
Sbjct: 272 RGAKMRYVIEDYWRKAHLDGGYELLYTPHVANLDLWKTSGHFDFYRENMF------DSMK 325

Query: 330 -DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQ 388
            + + + +KPMNCP HV  + + L SYRE P+R AE G+VYR E SG LHGLMRVRGFTQ
Sbjct: 326 IEEQAYQIKPMNCPFHVLTYKNELHSYREFPLRWAELGTVYRYERSGVLHGLMRVRGFTQ 385

Query: 389 DDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIM 448
           DDAHVFC   Q+ +E L + NL   I  DFGF+   V LSTRP+K VG+D  W+ A    
Sbjct: 386 DDAHVFCLPTQIASEILGVLNLTEKILSDFGFKDYEVNLSTRPDKSVGTDEGWELA---T 442

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
           + +++ +     D I      G GAFYGPK +  +KDAIGR WQC TIQVDFNLP RF+ 
Sbjct: 443 QALVEALNGKGWDYIEDK---GGGAFYGPKIDIKIKDAIGRTWQCSTIQVDFNLPERFDM 499

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYA 568
            YV     +  P+MIHRA+FGS+ERF GI+IEN+ G+ PLWL+PIQ  +  ++ + +EY 
Sbjct: 500 EYVAVDGSRQRPIMIHRAIFGSLERFYGILIENYAGDFPLWLAPIQLRLLPVSEAQIEYG 559

Query: 569 QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           + +   LK     +E D   E +  +IR   ++KIP++ I G KE   +++ IR
Sbjct: 560 ETVVATLKQAGYRVEIDCTGERLGKQIRNAELEKIPVVAIVGKKEVETQTLSIR 613


>gi|22325483|ref|NP_671778.1| EMB2761 (EMBRYO DEFECTIVE 2761); ATP binding / aminoacyl-tRNA
           ligase/ ligase, forming aminoacyl-tRNA and related
           compounds / nucleotide binding / threonine-tRNA ligase
           [Arabidopsis thaliana]
 gi|330250779|gb|AEC05873.1| putative threonyl-tRNA synthetase, putative / threonine--tRNA
           ligase [Arabidopsis thaliana]
          Length = 650

 Score =  518 bits (1335), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 265/584 (45%), Positives = 384/584 (65%), Gaps = 23/584 (3%)

Query: 51  SDPVREGSIEIITPEDPRS--LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF 108
           S P +     ++ P +  S  L  IRH+CAH+MA AVQ ++P+ +V IGP I++GFYYDF
Sbjct: 58  SGPKKAEPSTVVLPSNESSDKLLKIRHTCAHVMAMAVQKLFPDAKVTIGPWIDNGFYYDF 117

Query: 109 DKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK 168
           D E P +  +L +I+K+M  II+R+ P L++ +S E+A++   +  E YK+EIL+ I  +
Sbjct: 118 DME-PLTDKDLKRIKKEMDRIISRNLPLLREEVSREEAKKRIMAINEPYKMEILDGI-KE 175

Query: 169 ENVTLYRQG-EWFDLCRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWN 226
           E +T+Y  G EW+DLC GPHV +TG++ KK  +L  VAGAYWRGD  R ML RIYGTAW 
Sbjct: 176 EPITVYHIGNEWWDLCAGPHVETTGKINKKAVELESVAGAYWRGDEKRQMLQRIYGTAWE 235

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLI--SYM 283
           ++++L  YL+F EE+++RDHR++ +++DLF I  E G G++FWH KG  I + +I  S+ 
Sbjct: 236 SEEQLKAYLHFKEEAKRRDHRRIGQDLDLFSIQDEAGGGLVFWHPKG-AIVRNIIEESWK 294

Query: 284 RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPG 343
           +  ++  Y+ I TP V    LW+ SGH D YR NM+     +D +     + L+PMNCP 
Sbjct: 295 KMHVEHGYDLIYTPHVAKADLWKISGHLDFYRENMYDQMEIEDEL-----YQLRPMNCPY 349

Query: 344 HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE 403
           H+ ++    +SYR+LP+R+AE G+VYR E SGSLHGL RVRGFTQDDAH+FC ++Q+ +E
Sbjct: 350 HILLYQRKRQSYRDLPIRVAELGTVYRYELSGSLHGLFRVRGFTQDDAHIFCLEDQIKDE 409

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              + +L   I   FGF K  V LSTRPEK VG D +W+ A   ++  LD    S +   
Sbjct: 410 IRGVLDLTEEILSRFGFNKYEVNLSTRPEKSVGGDDIWEKATCALRDALDDKGWSYE--- 466

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
              V  G GAFYGPK +  ++DA+GR WQC TIQVDFNLP RF+  YV+++S+K  P+MI
Sbjct: 467 ---VDEGGGAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDITYVDTNSDKKRPIMI 523

Query: 524 HRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIE 583
           HRAV GS+ERF G++IE++ G+ PLWLSP+Q  V  +T + +E+ +E++  L++  +  E
Sbjct: 524 HRAVLGSLERFFGVLIEHYAGDFPLWLSPVQVRVLPVTDNQLEFCKEVSKKLRACGVRAE 583

Query: 584 TDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR-RFGS 626
                E +   IR    +KIP++ + G KE    ++ +R RFG 
Sbjct: 584 L-CHGERLPKLIRNAETQKIPLMAVVGPKEVETGTVTVRSRFGG 626


>gi|83816191|ref|YP_446893.1| threonyl-tRNA synthetase [Salinibacter ruber DSM 13855]
 gi|83757585|gb|ABC45698.1| threonyl-tRNA synthetase [Salinibacter ruber DSM 13855]
          Length = 694

 Score =  518 bits (1335), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 273/645 (42%), Positives = 402/645 (62%), Gaps = 20/645 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEI 61
           + I +T PDGS    P   TG ++AESI   LA+ A+A+ +NG+V DL  PV E + IEI
Sbjct: 45  TSIDITLPDGSTHTHPAGTTGLEIAESIGAGLARDALAIKVNGEVRDLDRPVTEDAEIEI 104

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELA 120
           +T +D        HS AH+MAEA+Q+++P+V+  IGP I+ GFYYD D  +Q  S+DEL 
Sbjct: 105 LTWDDEEGKQTFWHSSAHLMAEALQALYPDVKFTIGPPIDQGFYYDVDLGDQTLSADELE 164

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IE+KM E+  RD+ + +  +S   A E +E++   YK+E++E +  +  ++ Y QGE+ 
Sbjct: 165 AIEEKMLELARRDAAYERHEVSKADAIEHYEAEGNEYKLELIEGL-EEGEISFYEQGEFT 223

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ STG +K   KL+ VAGAYWRGD + P L+RIYG ++  Q+ L  +L    +
Sbjct: 224 DLCRGPHIPSTGDIKAP-KLLSVAGAYWRGDESNPQLTRIYGISFPKQKLLEDFLERRRK 282

Query: 241 SEKRDHRKLAREMDLFHIAED--GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTP 297
           +++RDHRKL  E++LF    +  G G+  W  KG  + QTL   +++ ++K  Y+ + TP
Sbjct: 283 AKERDHRKLGTELNLFTFDTEQVGPGLPMWLPKGTTLRQTLQEVLQQEQVKQGYKPVCTP 342

Query: 298 QVLDQHLWQQSGHWDSYRANMFA-VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
            +    L++ SGH+  Y  + F  +   +    +   + LKPMNCP HV ++ +   SYR
Sbjct: 343 HIGRLDLYRTSGHYPHYEDDQFPPMVTGEGDDGEEDGYLLKPMNCPHHVKIYQNDHHSYR 402

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +LPVRLAEFG+VYR E +G L GL RVRGFTQDDAH+FCT  Q+ +E   + +L + +  
Sbjct: 403 DLPVRLAEFGTVYRQEQTGELGGLTRVRGFTQDDAHIFCTPAQVKDEFKSVIDLTLKVLD 462

Query: 417 DFGFEKIMVKLSTR----PEKRVGSDALWDDAE-NIMKGVLDTIKNSSQDRINTGVLLGE 471
             GFE+   ++S R     EK  G DALW  AE +I + V +T  ++ ++        GE
Sbjct: 463 ALGFEEFEAQISLRDPDDTEKYTGRDALWTRAEQDIREAVAETDLDAYEEP-------GE 515

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
            AFYGPK +++++DA+GR WQ GTIQVD+NLP RF   YV+ H E+  PVMIHRA FGS+
Sbjct: 516 AAFYGPKLDFMVEDALGRAWQLGTIQVDYNLPERFELTYVDEHDERKRPVMIHRAPFGSL 575

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           ERFIG++IE+  GN P WL+P Q  +  +    V+YAQE+A  L++  + +E D  +ET+
Sbjct: 576 ERFIGVLIEHCGGNFPTWLAPTQVQIIPVGDDFVDYAQEVAATLRAEDVRVEIDTSDETV 635

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
            YKIRE   +K+P +++ G  E    ++ +R         VS+ D
Sbjct: 636 GYKIREAETQKVPYMLVVGGDEEEAGTVSVRSHADGPQGTVSVQD 680


>gi|126658692|ref|ZP_01729837.1| Threonyl-tRNA synthetase, class IIa [Cyanothece sp. CCY0110]
 gi|126619954|gb|EAZ90678.1| Threonyl-tRNA synthetase, class IIa [Cyanothece sp. CCY0110]
          Length = 642

 Score =  518 bits (1335), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 262/593 (44%), Positives = 360/593 (60%), Gaps = 47/593 (7%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           +P  L  IRH+CAH+MA AVQ ++PE +V IGP    GFYYDFD+ +PF+ ++L +I K+
Sbjct: 32  NPEQLERIRHTCAHVMAMAVQILFPETKVTIGPTTNTGFYYDFDRPEPFAPEDLKKITKQ 91

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE------- 178
           M+ II  + P +++ ++ E+ +   E   E YK+EIL+SIPA E +T Y  G        
Sbjct: 92  MRFIIKANLPIIREEITREEIKAEIEQLGEPYKLEILDSIPAGETITRYYIGSPDGGRLP 151

Query: 179 --------------------------WFDLCRGPHVRSTGQVK-KFFKLMKVAGAYWRGD 211
                                     W+DLC GPH+  TG++    F L  VAGAYWRGD
Sbjct: 152 NVGEKLKGALPEPSLIKPVKIPATVSWWDLCAGPHINYTGEINPNAFALESVAGAYWRGD 211

Query: 212 SNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHR 270
             +  L RIYGTAW T ++L  YL   EE+++RDHRKL +E+ LF I E  G G++FWH 
Sbjct: 212 ETKAQLQRIYGTAWETPEQLDAYLKQQEEAKRRDHRKLGKELKLFSIQEGAGGGLVFWHP 271

Query: 271 KGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
           +G  +   +  Y R+  +   YE + TP V +  LW+ SGH+D YR NMF     D    
Sbjct: 272 RGATMRYIIEDYWRKAHLDGGYELLYTPHVANLELWKTSGHFDFYRENMF-----DSMDI 326

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
           + + + +KPMNCP HV  + + L SYRE P+R AE G+VYR E SG LHGLMRVRGFTQD
Sbjct: 327 EEQAYQIKPMNCPFHVLTYKNDLHSYREFPLRWAELGTVYRYERSGVLHGLMRVRGFTQD 386

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMK 449
           DAH+FC   Q+  E L + NL   I  DFGF+   V LSTRPEK VG+D  W+ A    +
Sbjct: 387 DAHIFCLPTQIAAEILGVLNLTEKILSDFGFKDYEVNLSTRPEKSVGTDEGWELA---TQ 443

Query: 450 GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAF 509
            +++ + + S + I      G GAFYGPK +  +KDAIGR WQC TIQVDFNLP RF+  
Sbjct: 444 ALVEALNSKSWEYIEDK---GGGAFYGPKIDIKIKDAIGRTWQCSTIQVDFNLPERFDME 500

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQ 569
           YV +   +  P+MIHRA+FGS+ERF GI+IEN+ G+ PLWL+PIQ  +  ++ +  EY +
Sbjct: 501 YVAADGSRQRPIMIHRAIFGSLERFYGILIENYAGDFPLWLAPIQLRLLPVSEAQREYGE 560

Query: 570 EIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
            +   LK     +E D   E +  +IR+  ++KIP++ I G+KE   +S+ IR
Sbjct: 561 TVVATLKEAGYRVEIDCTGERLGKQIRKAELEKIPVVAIVGNKEVETQSLSIR 613


>gi|23099609|ref|NP_693075.1| threonine-tRNA ligase [Oceanobacillus iheyensis HTE831]
 gi|73919811|sp|Q8EPF3|SYT_OCEIH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|22777839|dbj|BAC14110.1| threonine-tRNA ligase [Oceanobacillus iheyensis HTE831]
          Length = 646

 Score =  518 bits (1335), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 258/650 (39%), Positives = 411/650 (63%), Gaps = 20/650 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           +D+ + FPDGS K FPV  TG ++A SIS  L K+A+A+ ++G++ DL   +  G SIEI
Sbjct: 2   ADLSIIFPDGSEKQFPVGTTGEEIAASISPGLKKQALAIKLDGELVDLRRELSSGGSIEI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           IT ++   L V+RHS AH++A+A++ ++ +V++ +GP+IE+GFYYD D E   + ++L +
Sbjct: 62  ITYKNNEGLEVLRHSSAHLLAQAIKRLFNDVKLGVGPVIEEGFYYDIDMEHKLTPEDLPK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK+M+ II  +    +  +S  KA+E+F    +  K+E++++IP  E VT+Y QGE+FD
Sbjct: 122 IEKEMKRIIDENLEIKRVEVSRNKAQEMFSDIGDDLKLELIDAIPENEQVTIYEQGEFFD 181

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG HV ST ++K  FKL+ ++GAYWRGDSN   L RIYGTA+  + +L ++L  LEE 
Sbjct: 182 LCRGIHVPSTSKIKA-FKLLSISGAYWRGDSNNKQLQRIYGTAFEKKGQLEEHLQILEER 240

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+ +F +++  G G+  W  KG  I + +  Y+   + +  Y  + TP +
Sbjct: 241 KERDHRKLGKELGIFTVSQKVGQGLPLWLPKGATIRRNVERYIVDLEERLGYSHVYTPVL 300

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +  L++ SGHWD Y+ +MF     D+         L+PMNCP H+ VF + L SYR LP
Sbjct: 301 GNVELYKTSGHWDHYQDDMFPTMEMDN-----EELVLRPMNCPHHMMVFKNQLWSYRNLP 355

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           VR+AE G+++R+E SG+L GL RVR  T +DAH+F   +Q+  E +++  L+  +YKDFG
Sbjct: 356 VRIAELGTMHRHEMSGALAGLQRVRAMTLNDAHIFARPDQLKEEFIRVVELVQHVYKDFG 415

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
            +    +LS R     EK V +D +W+ A+ ++K   +T+++ + + +      GE AFY
Sbjct: 416 IDDYYFRLSYRDPEDKEKYVDNDEMWEKAQAMLK---ETMEDMNLEYVEAE---GEAAFY 469

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G+D    TIQ+DF+LP RF+  Y+     +  PV+IHR V  ++ERF+
Sbjct: 470 GPKLDVQVKTALGKDETLSTIQLDFHLPERFDLTYIGEDGNQHRPVVIHRGVVSTMERFV 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
             +IE +KG  P WL+P+Q  +  ++  A ++YA++I   L+   + +E D R+E I YK
Sbjct: 530 AFLIEEYKGAFPTWLAPVQVKIIPVSLQAHLDYAKDIEEKLRYQGVRVELDERDEKIGYK 589

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IRE   +K+P  ++ GDKE    S+  RR+G   T+ +     + ++ +E
Sbjct: 590 IREAQTQKVPFALVLGDKEMESNSVNYRRYGEQDTETLEFDQFLNLIKEE 639


>gi|257091083|ref|ZP_05585444.1| threonyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|256999895|gb|EEU86415.1| threonyl-tRNA synthetase [Enterococcus faecalis CH188]
          Length = 645

 Score =  518 bits (1334), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 261/635 (41%), Positives = 403/635 (63%), Gaps = 23/635 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDP-VREGSIEIIT 63
           I +TFPDG++K F    T  DVA+SIS SLAKKA+A   NG + DL  P V +GS+EI+T
Sbjct: 3   IHITFPDGAVKPFDSGVTTFDVAKSISNSLAKKALAGKFNGVLIDLDRPIVEDGSLEIVT 62

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
           P+   +L ++RHS AH+MA A++ ++P ++  +GP I+ GFYYD D  E P ++++L  I
Sbjct: 63  PDHEDALGILRHSSAHLMANALRRLFPNIKFGVGPAIDSGFYYDTDNGESPVTAEDLPAI 122

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M +I+  ++P +++ +S  +A ELF    + YKVE++  +P  E +T+Y QG++ DL
Sbjct: 123 EAEMMKIVKENNPIVRKEISRAEALELFAD--DPYKVELITDLPEDEIITVYDQGDFVDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRG HV STG+++  FKL+ VAGAYWRG+S+  M+ RIYGTA+  +++L +++   EE++
Sbjct: 181 CRGVHVPSTGRIQ-VFKLLSVAGAYWRGNSDNHMMQRIYGTAFFDKKDLKEFIKMREEAK 239

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVL 300
           +RDHRKL +E+DLF ++++ GSG+ FW  KG  I +T+  Y+  ++I+  Y+ + TP + 
Sbjct: 240 ERDHRKLGKELDLFMVSQEVGSGLPFWLPKGATIRRTIERYIVDKEIRLGYQHVYTPIMA 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D  L++ SGHWD Y  +MF        + D     L+PMNCP H+ V+ + + SYRELP+
Sbjct: 300 DVELYKTSGHWDHYHEDMFPPM----DMGDGEMLVLRPMNCPHHMMVYKNDIHSYRELPI 355

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  +   L++++Y DF  
Sbjct: 356 RIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVAVYADFNI 415

Query: 421 EKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
                +LS R     +K    DA+W+ A+ ++K  +D ++      ++     GE AFYG
Sbjct: 416 TDYRFRLSYRDPNNTDKYFDDDAMWEKAQAMLKAAMDELE------LDYFEAEGEAAFYG 469

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH-PVMIHRAVFGSIERFI 535
           PK +  +K A+G +    TIQ+DF LP RF+  YV    E  H PV+IHR +  ++ERF+
Sbjct: 470 PKLDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTMERFV 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
             + E +KG  P WL+PIQA +  ++  A  EYA EI   L++  L +E D RNE + YK
Sbjct: 530 AYLTEVYKGAFPTWLAPIQATIIPVSVEAHSEYAYEIKERLQAQGLRVEVDDRNEKMGYK 589

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           IR    +K+P  ++ GDKE  + ++ +RR+GS  T
Sbjct: 590 IRASQTQKVPYQLVVGDKEMEDATVNVRRYGSKET 624


>gi|256545863|ref|ZP_05473219.1| threonine--tRNA ligase [Anaerococcus vaginalis ATCC 51170]
 gi|256398559|gb|EEU12180.1| threonine--tRNA ligase [Anaerococcus vaginalis ATCC 51170]
          Length = 641

 Score =  518 bits (1334), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 259/644 (40%), Positives = 395/644 (61%), Gaps = 18/644 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           IK+  PD S+K +    +  DV + IS  L + A+   +NGKV   ++P+ E S  ++I 
Sbjct: 2   IKIKLPDESVKEYENGVSVEDVTKDISEGLFRSALGAVVNGKVMGYAEPINEDSDFKVIK 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            ED     +  H+ +H+MA A++ IWP+ + AIGP IE GFYYD D E  F  ++L +IE
Sbjct: 62  FEDKEGKEIFWHTTSHLMAAAIKEIWPDAKFAIGPAIESGFYYDIDLEHRFVPEDLPKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE--WFD 181
           +KM+EI  +D   +++ +S  +A E F+ + + YKVE++E +P  E +TLY  G+  + D
Sbjct: 122 EKMKEIAKKDLKMVRKEISRNEALEYFKKENQEYKVELIEDLPEDEIITLYEMGDNVFVD 181

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LC+G H+ ST  +K   KL  +AGAYWRGDS+R ML RIYG ++  +++L +Y+   EE+
Sbjct: 182 LCKGAHLLSTKSIKAI-KLNSIAGAYWRGDSDRKMLQRIYGISFEKKKQLDEYIELQEEA 240

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVL 300
           ++RDHRK+ +EM+LF   ++  G  F+   G  +   L+++    + ++ Y EI TP ++
Sbjct: 241 KRRDHRKIGKEMNLFSFHDEAPGFPFFKENGMILRHELLNWWTDVLAENGYGEIQTPLIM 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ LW +SGHWD Y+ NM+  K       D   +A+KPMNCPG V V+     SYR+LP+
Sbjct: 301 NEELWHRSGHWDHYKENMYFTKI------DGENYAVKPMNCPGSVLVYGEEPHSYRDLPI 354

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLAE+G V+R+E SG+LHGL RVR FTQDDAHV+C   Q+ +E  K+ +L   +Y  FGF
Sbjct: 355 RLAEYGQVHRHELSGALHGLFRVRTFTQDDAHVYCLPSQVKDEVFKMIDLADLLYSTFGF 414

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
            K  ++LSTRP+  +G    WD AE  ++  L  I+   +  IN      +GAFYGPK +
Sbjct: 415 -KYKIELSTRPDDFMGKIEEWDFAEKALEDAL--IERGIEYTINPK----DGAFYGPKID 467

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           + L+DA  R WQCGTIQ+DF LP  F+  Y++ + EK  PVM+HRA+ GSIERFIG + E
Sbjct: 468 FHLEDAAKRTWQCGTIQLDFQLPQNFDLTYIDENGEKKRPVMLHRALLGSIERFIGSVTE 527

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
            F G  PLW++P Q  +  ++    ++A ++A  +K     +E D R+E + YKIR+  +
Sbjct: 528 QFAGRFPLWINPKQVEIIPVSDKFADFADDLAKKIKKAGYRVEVDHRSEGVGYKIRQAQL 587

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            +   +++ G+ E     + +R      T+ VS  + I  L +E
Sbjct: 588 MRTNYMLVVGENEEKSGKLTVRNRDGEETKDVSFEEFIEKLDEE 631


>gi|229549033|ref|ZP_04437758.1| threonyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
 gi|312904390|ref|ZP_07763551.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|229305826|gb|EEN71822.1| threonyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
 gi|310632289|gb|EFQ15572.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|315162804|gb|EFU06821.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0645]
 gi|315576849|gb|EFU89040.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0630]
          Length = 660

 Score =  518 bits (1334), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 261/635 (41%), Positives = 403/635 (63%), Gaps = 23/635 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDP-VREGSIEIIT 63
           I +TFPDG++K F    T  DVA+SIS SLAKKA+A   NG + DL  P V +GS+EI+T
Sbjct: 18  IHITFPDGAVKPFDSGVTTFDVAKSISNSLAKKALAGKFNGVLIDLDRPIVEDGSLEIVT 77

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
           P+   +L ++RHS AH+MA A++ ++P ++  +GP I+ GFYYD D  E P ++++L  I
Sbjct: 78  PDHEDALGILRHSSAHLMANALRRLFPNIKFGVGPAIDSGFYYDTDNGESPVTAEDLPAI 137

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M +I+  ++P +++ +S  +A ELF    + YKVE++  +P  E +T+Y QG++ DL
Sbjct: 138 EAEMMKIVKENNPIVRKEISRAEALELFAD--DPYKVELITDLPEDEIITVYDQGDFVDL 195

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRG HV STG+++  FKL+ VAGAYWRG+S+  M+ RIYGTA+  +++L +++   EE++
Sbjct: 196 CRGVHVPSTGRIQ-VFKLLSVAGAYWRGNSDNHMMQRIYGTAFFDKKDLKEFIKMREEAK 254

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVL 300
           +RDHRKL +E+DLF ++++ GSG+ FW  KG  I +T+  Y+  ++I+  Y+ + TP + 
Sbjct: 255 ERDHRKLGKELDLFMVSQEVGSGLPFWLPKGATIRRTIERYIVDKEIRLGYQHVYTPIMA 314

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D  L++ SGHWD Y  +MF        + D     L+PMNCP H+ V+ + + SYRELP+
Sbjct: 315 DVELYKTSGHWDHYHEDMFPPM----DMGDGEMLVLRPMNCPHHMMVYKNDIHSYRELPI 370

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  +   L++++Y DF  
Sbjct: 371 RIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVAVYADFNI 430

Query: 421 EKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
                +LS R     +K    DA+W+ A+ ++K  +D ++      ++     GE AFYG
Sbjct: 431 TDYRFRLSYRDPNNTDKYFDDDAMWEKAQAMLKAAMDELE------LDYFEAEGEAAFYG 484

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH-PVMIHRAVFGSIERFI 535
           PK +  +K A+G +    TIQ+DF LP RF+  YV    E  H PV+IHR +  ++ERF+
Sbjct: 485 PKLDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTMERFV 544

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
             + E +KG  P WL+PIQA +  ++  A  EYA EI   L++  L +E D RNE + YK
Sbjct: 545 AYLTEVYKGAFPTWLAPIQATIIPVSVEAHSEYAYEIKERLQAQGLRVEVDDRNEKMGYK 604

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           IR    +K+P  ++ GDKE  + ++ +RR+GS  T
Sbjct: 605 IRASQTQKVPYQLVVGDKEMEDATVNVRRYGSKET 639


>gi|256763421|ref|ZP_05504001.1| threonyl-tRNA synthetase [Enterococcus faecalis T3]
 gi|256958077|ref|ZP_05562248.1| threonyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|257079964|ref|ZP_05574325.1| threonyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|256684672|gb|EEU24367.1| threonyl-tRNA synthetase [Enterococcus faecalis T3]
 gi|256948573|gb|EEU65205.1| threonyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|256987994|gb|EEU75296.1| threonyl-tRNA synthetase [Enterococcus faecalis JH1]
          Length = 645

 Score =  517 bits (1332), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 261/635 (41%), Positives = 402/635 (63%), Gaps = 23/635 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           I +TFPDG++K F    T  DVA+SIS SLAKKA+A   NG + DL  P+ E GS+EI+T
Sbjct: 3   IHITFPDGAVKPFDSGVTTFDVAKSISNSLAKKALAGKFNGVLIDLDRPIAEDGSLEIVT 62

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
           P+   +L ++RHS AH+MA A++ ++P ++  +GP I+ GFYYD D  E P ++++L  I
Sbjct: 63  PDHEDALGILRHSSAHLMANALRRLFPNIKFGVGPAIDSGFYYDTDNGESPVTAEDLPAI 122

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M +I+  ++P +++ +S  +A ELF    + YKVE++  +P  E +T+Y QG++ DL
Sbjct: 123 EAEMMKIVKENNPIVRKEISRAEALELFAD--DPYKVELITDLPEDEIITVYDQGDFVDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRG HV STG+++  FKL+ VAGAYWRG+S+  M+ RIYGTA+  +++L +++   EE++
Sbjct: 181 CRGVHVPSTGRIQ-VFKLLSVAGAYWRGNSDNHMMQRIYGTAFFDKKDLKEFIKMREEAK 239

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVL 300
           +RDHRKL +E+DLF ++++ GSG+ FW  KG  I +T+  Y+  ++I   Y+ + TP + 
Sbjct: 240 ERDHRKLGKELDLFMVSQEVGSGLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIMA 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D  L++ SGHWD Y  +MF        + D     L+PMNCP H+ V+ + + SYRELP+
Sbjct: 300 DVELYKTSGHWDHYHEDMFPPM----DMGDGEMLVLRPMNCPHHMMVYKNDIHSYRELPI 355

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  +   L++++Y DF  
Sbjct: 356 RIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVAVYADFNI 415

Query: 421 EKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
                +LS R     +K    DA+W+ A+ ++K  +D ++      ++     GE AFYG
Sbjct: 416 TDYRFRLSYRDPNNTDKYFDDDAMWEKAQAMLKAAMDELE------LDYFEAEGEAAFYG 469

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH-PVMIHRAVFGSIERFI 535
           PK +  +K A+G +    TIQ+DF LP RF+  YV    E  H PV+IHR +  ++ERF+
Sbjct: 470 PKLDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTMERFV 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
             + E +KG  P WL+PIQA +  ++  A  EYA EI   L++  L +E D RNE + YK
Sbjct: 530 AYLTEVYKGAFPTWLAPIQATIIPVSVEAHSEYAYEIKERLQAQGLRVEVDDRNEKMGYK 589

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           IR    +K+P  ++ GDKE  + ++ +RR+GS  T
Sbjct: 590 IRASQTQKVPYQLVVGDKEMEDATVNVRRYGSKET 624


>gi|253755215|ref|YP_003028355.1| threonyl-tRNA synthetase [Streptococcus suis BM407]
 gi|251817679|emb|CAZ55427.1| threonyl-tRNA synthetase [Streptococcus suis BM407]
          Length = 650

 Score =  517 bits (1332), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 262/640 (40%), Positives = 402/640 (62%), Gaps = 23/640 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+TFPDG+++ +    T  ++AESIS+SLAKKA+A   NGK+ D +  + E G++EI+ 
Sbjct: 2   IKITFPDGAVREYQAGVTTFEIAESISKSLAKKALAGKFNGKLIDTTRAIDEDGTLEIVM 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQI 122
           P+   +L ++RHS AH+ A+A + ++ ++++ +GP I+DGFYYD D      S+++L +I
Sbjct: 62  PDHDDALDILRHSAAHLFAQAARRLFSDIKLGVGPAIQDGFYYDTDNAAGQISNEDLPRI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWFD 181
           +++M +I+  + P  ++ ++ E+A E+F  K + YK+E++      E  +T+Y QGE+ D
Sbjct: 122 QEEMMKIVKENFPSERREVTKEEALEIF--KNDPYKLELIHEHSDDEGGLTIYTQGEYVD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++  F+L+ VAGAYWRG S  PM+ R+YGTAW  +++L  YL   EE+
Sbjct: 180 LCRGPHVPSTGRIQ-IFELLNVAGAYWRGKSENPMMQRVYGTAWFDKKDLKAYLQMREEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+++ G G+ FW   G  I +TL  Y+  K +   Y+ + TP +
Sbjct: 239 KERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRTLERYITDKELASGYQHVYTPPL 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHW+ Y  +MF        + D   F L+PMNCP H+ V+ + ++SYRELP
Sbjct: 299 ASVELYKTSGHWEHYSEDMFPTM----DMGDGEEFVLRPMNCPHHIQVYKNHVRSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           VR+AE G ++R E SG+L GL RVR  T +D H+F T EQ+  E  K   LII +Y DF 
Sbjct: 355 VRIAELGMMHRYEKSGALTGLQRVREMTLNDGHIFVTPEQIQEEFKKALQLIIDVYADFN 414

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R     EK   +D +W++A+ ++KG +D +       ++     GE AFY
Sbjct: 415 LNDYRFRLSYRDPEDKEKYYDNDEMWENAQRMLKGAMDEMG------VDYFEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G +    TIQ+DF LP RF   Y+ +  E+  PVMIHR V  ++ERF 
Sbjct: 469 GPKLDIQVKTALGNEETLSTIQLDFLLPERFGLTYIGADGEEHRPVMIHRGVISTMERFT 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IE +KG  P WL+P Q  +  I+  A ++YA ++A  L+   + +  D RNE + YK
Sbjct: 529 AILIETYKGAFPTWLAPTQVTMIPISVEAHLDYAWKVAKELQDRGVRVHVDERNEKMQYK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           IR+    KIP  +I GDKE  + ++ +RR+GS  TQ  S+
Sbjct: 589 IRQSQTSKIPYQLIVGDKEMEDNAVNVRRYGSKATQTQSV 628


>gi|153803259|ref|ZP_01957845.1| threonyl-tRNA synthetase [Vibrio cholerae MZO-3]
 gi|124121199|gb|EAY39942.1| threonyl-tRNA synthetase [Vibrio cholerae MZO-3]
          Length = 516

 Score =  517 bits (1332), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 242/497 (48%), Positives = 338/497 (68%), Gaps = 15/497 (3%)

Query: 150 FESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYW 208
           FES+ E+YK+EIL E++   +   LY   E+ D+CRGPHV   G  + F KL+ +AGAYW
Sbjct: 23  FESRGESYKMEILDENVARDDRPGLYHHEEYIDMCRGPHVPHMGFCQNF-KLLNIAGAYW 81

Query: 209 RGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFW 268
           RG+S+  ML RIYGTA++ ++ L  +L  LEE+ KRDHRK+ +++DLFH+ ++  G++FW
Sbjct: 82  RGNSDNKMLQRIYGTAFHDKKALQAHLTRLEEAAKRDHRKIGKQLDLFHMQQEAPGMVFW 141

Query: 269 HRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
           H  GW +F+ L  ++R K+ +  Y+E+  P ++D+ LW++SGHWD Y   MF       T
Sbjct: 142 HHNGWSVFRDLEIFIRHKLNEYGYQEVKGPLMMDRVLWERSGHWDKYADAMFT------T 195

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
             + R +A+KPMNCPGH+ +FN GLKSYR+LP+R+AEFGS +RNEPSGSLHG+MRVRGFT
Sbjct: 196 SSENREYAIKPMNCPGHIQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGIMRVRGFT 255

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENI 447
           QDDAH+FCT++Q+  E      ++   Y  FGF+ I+VKLSTRPEKRVGSD +WD +E  
Sbjct: 256 QDDAHIFCTEDQIQQEVTSCIKMVYDTYTTFGFQNIVVKLSTRPEKRVGSDEIWDKSE-- 313

Query: 448 MKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFN 507
            + ++D++K      I   +  GEGAFYGPK E+ L D + R WQCGT+Q+DFNLP+R  
Sbjct: 314 -QALIDSLKAMD---IPFEIQEGEGAFYGPKIEFTLYDCLDRAWQCGTVQLDFNLPTRLG 369

Query: 508 AFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEY 567
           A YV   +E+  PVMIHRA+ GS+ERFIGI+IE + G  P WL+P QA+V  IT    +Y
Sbjct: 370 ATYVGESNERLIPVMIHRAILGSLERFIGILIEEYAGFFPTWLAPEQAVVVNITDKQADY 429

Query: 568 AQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGST 627
           A E+A  L+   +  + D RNE I +KIREH++K++P +++CGD+E     I +R     
Sbjct: 430 AHEVAQKLQKCGIRAKADLRNEKIGFKIREHTLKRVPYMLVCGDQEMEAGEIAVRTRKGK 489

Query: 628 TTQKVSLLDAIPILTKE 644
              K  L D I  +  E
Sbjct: 490 DLGKFKLDDFIAHIQAE 506


>gi|315171869|gb|EFU15886.1| threonyl-tRNA synthetase [Enterococcus faecalis TX1342]
          Length = 660

 Score =  517 bits (1332), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 261/635 (41%), Positives = 402/635 (63%), Gaps = 23/635 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDP-VREGSIEIIT 63
           I +TFPDG++K F    T  DVA+SIS SLAKKA+A   NG + DL  P V +GS+EI+T
Sbjct: 18  IHITFPDGAVKPFDSGVTTFDVAKSISNSLAKKALAGKFNGVLIDLDRPIVEDGSLEIVT 77

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
           P+   +L ++RHS AH+MA A++ ++P ++  +GP I+ GFYYD D  E P ++++L  I
Sbjct: 78  PDHENALGILRHSSAHLMANALRRLFPNIKFGVGPAIDSGFYYDTDNGESPVTAEDLPAI 137

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M +I+  ++P +++ +S  +A ELF    + YKVE++  +P  E +T+Y QG++ DL
Sbjct: 138 EAEMMKIVKENNPIVRKEISRAEALELFAD--DPYKVELITDLPEDEIITVYDQGDFVDL 195

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRG HV STG+++  FKL+ VAGAYWRG+S+  M+ RIYGTA+  +++L +++   EE++
Sbjct: 196 CRGVHVPSTGRIQ-VFKLLSVAGAYWRGNSDNHMMQRIYGTAFFDKKDLKEFIKMREEAK 254

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVL 300
           +RDHRKL +E+DLF ++++ GSG+ FW  KG  I +T+  Y+  ++I   Y+ + TP + 
Sbjct: 255 ERDHRKLGKELDLFMVSQEVGSGLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIMA 314

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D  L++ SGHWD Y  +MF        + D     L+PMNCP H+ V+ + + SYRELP+
Sbjct: 315 DVELYKTSGHWDHYHEDMFPPM----DMGDGEMLVLRPMNCPHHMMVYKNDIHSYRELPI 370

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  +   L++++Y DF  
Sbjct: 371 RIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVAVYADFNI 430

Query: 421 EKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
                +LS R     +K    DA+W+ A+ ++K  +D ++      ++     GE AFYG
Sbjct: 431 TDYRFRLSYRDPNNTDKYFDDDAMWEKAQAMLKAAMDELE------LDYFEAEGEAAFYG 484

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH-PVMIHRAVFGSIERFI 535
           PK +  +K A+G +    TIQ+DF LP RF+  YV    E  H PV+IHR +  ++ERF+
Sbjct: 485 PKLDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTMERFV 544

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
             + E +KG  P WL+PIQA +  ++  A  EYA EI   L++  L +E D RNE + YK
Sbjct: 545 AYLTEVYKGAFPTWLAPIQATIIPVSVEAHSEYAYEIKERLQAQGLRVEVDDRNEKMGYK 604

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           IR    +K+P  ++ GDKE  + ++ +RR+GS  T
Sbjct: 605 IRASQTQKVPYQLVVGDKEMEDATVNVRRYGSKET 639


>gi|242242946|ref|ZP_04797391.1| threonyl-tRNA synthetase [Staphylococcus epidermidis W23144]
 gi|242233547|gb|EES35859.1| threonyl-tRNA synthetase [Staphylococcus epidermidis W23144]
          Length = 645

 Score =  517 bits (1332), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 263/637 (41%), Positives = 407/637 (63%), Gaps = 23/637 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I + FPDG+ K F    T  D+A+SIS  L KKAVA   NG++ DL+ P+ ++G+IEIIT
Sbjct: 4   INIQFPDGNTKEFDKGTTTEDIAQSISPGLRKKAVAGKFNGQLVDLTRPLEQDGTIEIIT 63

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P    +L V+RHS AH+MA+A++ ++ +V+  +GP+IE GFYYDFD +   SSD+  +IE
Sbjct: 64  PGSEEALEVLRHSTAHLMAQALKRLYGDVKFGVGPVIEGGFYYDFDMDDKVSSDDFDKIE 123

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K M++I+  +   +++ +S E+A++ F  K + YK+E++++IP  E+VTLY QGE+ DLC
Sbjct: 124 KTMKQIVNENHKIVREVVSKEEAKDFF--KDDPYKLELIDAIPDDESVTLYTQGEFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RG HV ST ++K+F KL+  AGAYWRG+S+  ML RIYGTA+  +++L  +L  LEE  +
Sbjct: 182 RGVHVPSTSKIKEF-KLLSTAGAYWRGNSDNKMLQRIYGTAFFDKKDLKAHLKMLEERRE 240

Query: 244 RDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLD 301
           RDHRK+ ++++LF   +  G+G+  W   G  I + +  Y+  +++   Y+ + TP + +
Sbjct: 241 RDHRKIGKDLELFTNNQLVGAGLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLAN 300

Query: 302 QHLWQQSGHWDSYRANMF-AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
             L++ SGHWD Y+ +MF A+K  +D         L+PMNCP H+ ++ +   SYRELP+
Sbjct: 301 VDLYKTSGHWDHYQEDMFPAMKLDED-----EAMVLRPMNCPHHMMIYKNKPHSYRELPI 355

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G+++R E SG++ GL RVRG T +D+H+F   +Q+  E  ++ N+I  +YKDFGF
Sbjct: 356 RIAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVNMIQDVYKDFGF 415

Query: 421 EKIMVKLSTR-PE---KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           E    +LS R PE   K    D +W+ AE+++K   D +  + ++ I      GE AFYG
Sbjct: 416 EDYRFRLSYRDPEDKHKYFDDDEMWEKAESMLKEASDELGLTYEEAI------GEAAFYG 469

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK +  +K A+G++    T Q+DF LP RF+  Y+    E+  PV+IHR V  ++ERF+ 
Sbjct: 470 PKLDVQVKTAMGKEETLSTAQLDFLLPERFDLTYIGQDGEQHRPVVIHRGVVSTMERFVA 529

Query: 537 IMIENFKGNLPLWLSPIQA-IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            + E  KG  P WL+P+Q  I+        +YA+ + + LKS  + +E D RNE + YKI
Sbjct: 530 FLTEETKGAFPTWLAPMQVEIIPVNVDLHYDYARLLQDELKSQGVRVEIDDRNEKMGYKI 589

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
           RE  +KKIP  I+ GDKE   + + +R++GS   + V
Sbjct: 590 REAQMKKIPYQIVVGDKEVENQEVNVRKYGSEKQESV 626


>gi|221633051|ref|YP_002522276.1| threonyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
 gi|221156502|gb|ACM05629.1| threonyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
          Length = 596

 Score =  517 bits (1332), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 251/576 (43%), Positives = 369/576 (64%), Gaps = 17/576 (2%)

Query: 50  LSDPVREGSIEIITPEDPR--SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD 107
           +SD  +E  +  + PE      LA +RHSCAH+MA+AV  ++P  ++ IGP I DGFYYD
Sbjct: 1   MSDLTKEMDL-AVAPESEHELDLARMRHSCAHVMAQAVLELFPGAKLGIGPAIADGFYYD 59

Query: 108 FDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPA 167
           FD  +P + ++L  IE++M+EI A   PF+++ ++ E+ARELF  + + YK+E++   P 
Sbjct: 60  FDLPRPLTPEDLEHIERRMEEIKAAAYPFVRRVVTREEARELF--RDQPYKLELIAEFPP 117

Query: 168 KENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNT 227
            E +T Y    + DLCRGPHVR T Q+  FFKL++V+GAYWRGD  RP L RIYGT+W T
Sbjct: 118 DEVITTYTHDGFTDLCRGPHVRDTSQIG-FFKLLRVSGAYWRGDERRPQLQRIYGTSWPT 176

Query: 228 QQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI 287
           +++L  YL+ LEE+E+RDHR+L RE++LFH      G+ +W  KG KI   L+ + R++ 
Sbjct: 177 REQLDAYLHRLEEAERRDHRRLGRELELFHFDPTAPGMPYWLPKGLKILNLLLDFWRQEH 236

Query: 288 -KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA 346
            K  Y+EI  P + D+ LW+ SGHWD YR NMF ++  +       T+ +KPMNCP  + 
Sbjct: 237 EKRGYQEIAAPLINDKSLWEVSGHWDHYRENMFLIQLDEHL-----TYGVKPMNCPNAMI 291

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           V+N   +SYR+LP+RL++   ++R E SG+LHGL+RVR F QDDAH+F T++Q+  E  +
Sbjct: 292 VYNLKKRSYRDLPLRLSDCDILHRYERSGTLHGLLRVRKFQQDDAHIFVTEDQIEEEFAR 351

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           I  +    Y  FG  +  ++L TRP   +G    WD AE  ++ +LD         I  G
Sbjct: 352 ILEIAQLFYGIFGL-RYTLRLGTRPADFMGDPETWDKAEAALQRILDRHAGPGNYLIGEG 410

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
               EGAFYGPK + +++DA+GR WQ GTIQ+DF LP RF   Y +    +  PV+IHR 
Sbjct: 411 ----EGAFYGPKIDILMEDALGRQWQTGTIQLDFQLPRRFGCTYTDRDGTEKTPVVIHRV 466

Query: 527 VFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF 586
           ++GS+ERFIGI+IE+F G  P+WL+P+QA +  I    + YA  + + L+   L +E D 
Sbjct: 467 IYGSLERFIGILIEHFAGAFPVWLAPVQATIIPIADRHLPYAYRVRDRLRDAGLRVEVDD 526

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
            +E +  KIR   ++KIP +++ GD+E +E S+ +R
Sbjct: 527 GDERMQAKIRSAQLQKIPYMLVVGDREVNEESLAVR 562


>gi|225873756|ref|YP_002755215.1| threonine--tRNA ligase [Acidobacterium capsulatum ATCC 51196]
 gi|259516262|sp|C1F9K5|SYT_ACIC5 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|225794268|gb|ACO34358.1| threonine--tRNA ligase [Acidobacterium capsulatum ATCC 51196]
          Length = 681

 Score =  517 bits (1332), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 269/666 (40%), Positives = 393/666 (59%), Gaps = 53/666 (7%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAING--------------- 45
           M   I++T PDG++K FP   T   VAESIS  LA+ AV   I                 
Sbjct: 1   MEKQIQVTLPDGTVKTFPAGTTPFQVAESISPRLAQAAVVARIQTTQPAAATVTAGSEAD 60

Query: 46  ------------------KVCDLSDPVREG-SIEIITPEDPRSLAVIRHSCAHIMAEAVQ 86
                             ++ DLS P+ E   + ++T +DP +L V+RHS AH+MA AV 
Sbjct: 61  SKTASEAAMYSAADPGAPRLVDLSTPLEEDVQLALLTEKDPEALKVLRHSAAHLMATAVL 120

Query: 87  SIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKA 146
            ++PE ++  GP  + GF+YDF +  PF+ ++L  IE +M EI  R+  F+++++  E+ 
Sbjct: 121 ELFPETKLGHGPATDAGFFYDFYRPTPFTPEDLKLIEGRMAEIAQRNDKFVREFIPREEG 180

Query: 147 RELFESKKEAYKVEILESIP-AKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAG 205
              F++  +  KV  +E      E ++LYR G + D CRGPHV ST ++K  FK+  +AG
Sbjct: 181 LAEFKAGDDFMKVHFIERFTQPGEAISLYRNGNFVDFCRGPHVPSTNRIKA-FKVTNLAG 239

Query: 206 AYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAE-DGSG 264
           AYW GD   P L R+YGTA+ ++++L ++   LEE  KRDHR L +++DLF I E  G+G
Sbjct: 240 AYWLGDEKNPQLQRLYGTAFFSKKDLDEHFARLEEIAKRDHRVLGKQLDLFSIQEIAGAG 299

Query: 265 VIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKC 323
           +IFWH KG  I + +  +MR + I+  Y+ + TP V+   LW+ SGH   Y  NMF    
Sbjct: 300 LIFWHPKGAMIRKIMEDWMREECIRRGYDLVYTPHVMRVQLWKTSGHEGFYSQNMFTPME 359

Query: 324 ADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRV 383
            DD       + LKPMNCPGH+ ++    +SYR+LPVR AE G+VYR E SG++HGL+RV
Sbjct: 360 LDDA-----EYRLKPMNCPGHILIYKSQPRSYRDLPVRYAELGNVYRYERSGTMHGLLRV 414

Query: 384 RGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST-RPEKR---VGSDA 439
           RGFTQDDAH+FCT EQ+ +E +   +   S+   FGF    V+LST  P  R    GSD 
Sbjct: 415 RGFTQDDAHIFCTPEQIEDEVVACIDFAQSVLTTFGFMDFQVELSTWDPNDRKNYAGSDD 474

Query: 440 LWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVD 499
            W+ A + ++  L      ++  I    + GE AFYGPK +  L D +GR WQ  T+Q D
Sbjct: 475 KWNLAISSLESAL------TRKGIAYKTIAGEAAFYGPKIDIKLVDVLGRLWQLSTVQFD 528

Query: 500 FNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTT 559
           FNLP+RF   YV    E+  PVM+HRA++GS+ERF G++IE++ G  PLWL+P+Q  +  
Sbjct: 529 FNLPARFELEYVGEDGERHQPVMVHRALYGSVERFFGVLIEHYAGAFPLWLAPVQIGLVP 588

Query: 560 ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSI 619
           I+   + YA+++   L++    +E D RNE +N KIR+ +++K P ++I GDKEA   ++
Sbjct: 589 ISERHLAYAEKVQQQLEAAGFRVELDRRNEKMNAKIRDFTLQKFPYVLIMGDKEAEAGAV 648

Query: 620 GIRRFG 625
            +R  G
Sbjct: 649 SVRTRG 654


>gi|163782015|ref|ZP_02177014.1| threonyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159882547|gb|EDP76052.1| threonyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 641

 Score =  517 bits (1332), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 256/606 (42%), Positives = 390/606 (64%), Gaps = 18/606 (2%)

Query: 23  GSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSCAHIM 81
           G+ + E   ++  K A+   +  ++ DL  P+ EG  I+ I   DP SL ++RHS AHIM
Sbjct: 21  GTTLGEIFEKAGIKDALGGKLGDRIIDLQTPINEGGEIKPIYKNDPESLEIMRHSLAHIM 80

Query: 82  AEAVQSIWPE--VQVAIGPIIEDGFYYDFDKE-QPFSSDELAQIEKKMQEIIARDSPFLK 138
           A+A++ ++    V + +GP  E+GFYYD + E    + ++L +IE+KM+EII RD P L+
Sbjct: 81  AQALKELYGAEVVHLGVGPTTEEGFYYDVEVEGHRITEEDLPKIEEKMREIIKRDYPILR 140

Query: 139 QYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFF 198
           + L  ++A +LF   KE YK++I++ I  ++ +++Y+QG++ DLCRGPH+ STG+   F 
Sbjct: 141 KELERDEAIKLFNDLKEKYKIDIIQRISPEDVISVYQQGDFIDLCRGPHLPSTGKAGSF- 199

Query: 199 KLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI 258
           KL  ++GAYW G +++P L+RIYG A+ + +EL Q L F EE++KRDHRKL R+++ F I
Sbjct: 200 KLTSISGAYWLGKADQPQLTRIYGMAFWSDKELRQRLRFYEEAKKRDHRKLGRDLEFFMI 259

Query: 259 AED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
            E+ G+G++ W  +G    + L  Y + + IK  Y+ + TP V    LW+ SGH + Y+ 
Sbjct: 260 DENVGAGLVLWLPRGSIYRKVLEDYWKEEHIKRGYQFVYTPHVGKSKLWEISGHLECYKP 319

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
           NMF     +        + +KPMNCP H+A++   ++SY++LPV+LAE G+VYR E SG 
Sbjct: 320 NMFPAMEMEG-----EEYYVKPMNCPFHIAIYKSKVRSYKDLPVKLAELGTVYRYEMSGV 374

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
           LHGL+RVRGFTQDDAH+ CT EQ+        +L +S+ KDFGF+   + +STRPE  +G
Sbjct: 375 LHGLLRVRGFTQDDAHIICTPEQVDEVIRDTLDLALSMLKDFGFDDFKIYVSTRPEDAIG 434

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
           SD  W+ +EN +K  ++ +  + +      +  G GAFYGPK +  ++DAIGR WQC TI
Sbjct: 435 SDEQWEVSENALKKAVEDLGYTYE------IDEGGGAFYGPKIDVKIRDAIGRLWQCSTI 488

Query: 497 QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI 556
           Q DFNLP RF+  YV   ++K  P MIHRA  GSIERF GI++E++ G LP+WLSP QA 
Sbjct: 489 QFDFNLPERFDMTYVGPDNKKHRPYMIHRAFLGSIERFTGILLEHYAGLLPVWLSPTQAR 548

Query: 557 VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASE 616
           +  I    +EY +++ + L+     ++ D R+E +N KIRE  + KIP +++ GD+E   
Sbjct: 549 IVPIADRHLEYGRKVLSRLQEEGFRVDMDERDERMNAKIREAELMKIPYVLVVGDREVEA 608

Query: 617 RSIGIR 622
            ++ +R
Sbjct: 609 GTVSVR 614


>gi|294779531|ref|ZP_06744926.1| threonine--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|300861074|ref|ZP_07107161.1| threonine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|307268336|ref|ZP_07549717.1| threonyl-tRNA synthetase [Enterococcus faecalis TX4248]
 gi|307276154|ref|ZP_07557285.1| threonyl-tRNA synthetase [Enterococcus faecalis TX2134]
 gi|294453410|gb|EFG21817.1| threonine--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|300850113|gb|EFK77863.1| threonine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|306507148|gb|EFM76287.1| threonyl-tRNA synthetase [Enterococcus faecalis TX2134]
 gi|306515362|gb|EFM83896.1| threonyl-tRNA synthetase [Enterococcus faecalis TX4248]
 gi|315036305|gb|EFT48237.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0027]
          Length = 660

 Score =  517 bits (1332), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 261/635 (41%), Positives = 402/635 (63%), Gaps = 23/635 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           I +TFPDG++K F    T  DVA+SIS SLAKKA+A   NG + DL  P+ E GS+EI+T
Sbjct: 18  IHITFPDGAVKPFDSGVTTFDVAKSISNSLAKKALAGKFNGVLIDLDRPIAEDGSLEIVT 77

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
           P+   +L ++RHS AH+MA A++ ++P ++  +GP I+ GFYYD D  E P ++++L  I
Sbjct: 78  PDHEDALGILRHSSAHLMANALRRLFPNIKFGVGPAIDSGFYYDTDNGESPVTAEDLPAI 137

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M +I+  ++P +++ +S  +A ELF    + YKVE++  +P  E +T+Y QG++ DL
Sbjct: 138 EAEMMKIVKENNPIVRKEISRAEALELFAD--DPYKVELITDLPEDEIITVYDQGDFVDL 195

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRG HV STG+++  FKL+ VAGAYWRG+S+  M+ RIYGTA+  +++L +++   EE++
Sbjct: 196 CRGVHVPSTGRIQ-VFKLLSVAGAYWRGNSDNHMMQRIYGTAFFDKKDLKEFIKMREEAK 254

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVL 300
           +RDHRKL +E+DLF ++++ GSG+ FW  KG  I +T+  Y+  ++I   Y+ + TP + 
Sbjct: 255 ERDHRKLGKELDLFMVSQEVGSGLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIMA 314

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D  L++ SGHWD Y  +MF        + D     L+PMNCP H+ V+ + + SYRELP+
Sbjct: 315 DVELYKTSGHWDHYHEDMFPPM----DMGDGEMLVLRPMNCPHHMMVYKNDIHSYRELPI 370

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  +   L++++Y DF  
Sbjct: 371 RIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVAVYADFNI 430

Query: 421 EKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
                +LS R     +K    DA+W+ A+ ++K  +D ++      ++     GE AFYG
Sbjct: 431 TDYRFRLSYRDPNNTDKYFDDDAMWEKAQAMLKAAMDELE------LDYFEAEGEAAFYG 484

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH-PVMIHRAVFGSIERFI 535
           PK +  +K A+G +    TIQ+DF LP RF+  YV    E  H PV+IHR +  ++ERF+
Sbjct: 485 PKLDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTMERFV 544

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
             + E +KG  P WL+PIQA +  ++  A  EYA EI   L++  L +E D RNE + YK
Sbjct: 545 AYLTEVYKGAFPTWLAPIQATIIPVSVEAHSEYAYEIKERLQAQGLRVEVDDRNEKMGYK 604

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           IR    +K+P  ++ GDKE  + ++ +RR+GS  T
Sbjct: 605 IRASQTQKVPYQLVVGDKEMEDATVNVRRYGSKET 639


>gi|255974800|ref|ZP_05425386.1| threonyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|256616698|ref|ZP_05473544.1| threonyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|257081588|ref|ZP_05575949.1| threonyl-tRNA synthetase [Enterococcus faecalis E1Sol]
 gi|257084237|ref|ZP_05578598.1| threonyl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|257417026|ref|ZP_05594020.1| threonyl-tRNA synthetase [Enterococcus faecalis AR01/DG]
 gi|255967672|gb|EET98294.1| threonyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|256596225|gb|EEU15401.1| threonyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|256989618|gb|EEU76920.1| threonyl-tRNA synthetase [Enterococcus faecalis E1Sol]
 gi|256992267|gb|EEU79569.1| threonyl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|257158854|gb|EEU88814.1| threonyl-tRNA synthetase [Enterococcus faecalis ARO1/DG]
 gi|295113730|emb|CBL32367.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Enterococcus sp.
           7L76]
          Length = 645

 Score =  517 bits (1332), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 261/635 (41%), Positives = 402/635 (63%), Gaps = 23/635 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDP-VREGSIEIIT 63
           I +TFPDG++K F    T  DVA+SIS SLAKKA+A   NG + DL  P V +GS+EI+T
Sbjct: 3   IHITFPDGAVKPFDSGVTTFDVAKSISNSLAKKALAGKFNGVLIDLDRPIVEDGSLEIVT 62

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
           P+   +L ++RHS AH+MA A++ ++P ++  +GP I+ GFYYD D  E P ++++L  I
Sbjct: 63  PDHEDALGILRHSSAHLMANALRRLFPNIKFGVGPAIDSGFYYDTDNGESPVTAEDLPAI 122

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M +I+  ++P +++ +S  +A ELF    + YKVE++  +P  E +T+Y QG++ DL
Sbjct: 123 EAEMMKIVKENNPIVRKEISRAEALELFAD--DPYKVELITDLPEDEIITVYDQGDFVDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRG HV STG+++  FKL+ VAGAYWRG+S+  M+ RIYGTA+  +++L +++   EE++
Sbjct: 181 CRGVHVPSTGRIQ-VFKLLSVAGAYWRGNSDNHMMQRIYGTAFFDKKDLKEFIKMREEAK 239

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVL 300
           +RDHRKL +E+DLF ++++ GSG+ FW  KG  I +T+  Y+  ++I   Y+ + TP + 
Sbjct: 240 ERDHRKLGKELDLFMVSQEVGSGLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIMA 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D  L++ SGHWD Y  +MF        + D     L+PMNCP H+ V+ + + SYRELP+
Sbjct: 300 DVELYKTSGHWDHYHEDMFPPM----DMGDGEMLVLRPMNCPHHMMVYKNDIHSYRELPI 355

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  +   L++++Y DF  
Sbjct: 356 RIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVAVYADFNI 415

Query: 421 EKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
                +LS R     +K    DA+W+ A+ ++K  +D ++      ++     GE AFYG
Sbjct: 416 TDYRFRLSYRDPNNTDKYFDDDAMWEKAQAMLKAAMDELE------LDYFEAEGEAAFYG 469

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH-PVMIHRAVFGSIERFI 535
           PK +  +K A+G +    TIQ+DF LP RF+  YV    E  H PV+IHR +  ++ERF+
Sbjct: 470 PKLDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTMERFV 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
             + E +KG  P WL+PIQA +  ++  A  EYA EI   L++  L +E D RNE + YK
Sbjct: 530 AYLTEVYKGAFPTWLAPIQATIIPVSVEAHSEYAYEIKERLQAQGLRVEVDDRNEKMGYK 589

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           IR    +K+P  ++ GDKE  + ++ +RR+GS  T
Sbjct: 590 IRASQTQKVPYQLVVGDKEMEDATVNVRRYGSKET 624


>gi|158336193|ref|YP_001517367.1| threonyl-tRNA synthetase [Acaryochloris marina MBIC11017]
 gi|158306434|gb|ABW28051.1| threonyl-tRNA synthetase [Acaryochloris marina MBIC11017]
          Length = 616

 Score =  517 bits (1331), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 257/597 (43%), Positives = 363/597 (60%), Gaps = 44/597 (7%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSS 116
            S  +  P     L  +RH+CAH+MA AVQ+++PE +V IGP  E GFYYDFD++Q F+ 
Sbjct: 4   ASSTLSAPNSTEQLQRLRHTCAHVMAMAVQNLFPETKVTIGPTTETGFYYDFDRDQAFTP 63

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
           ++L  I  +M+ II  + P +++ +  ++ +   E  +E YK+EIL  IPA E +T Y  
Sbjct: 64  EDLDAISTQMRRIIKANLPIIREQVDRDQMQAELEQLQEPYKLEILAQIPAGETITRYFI 123

Query: 177 GE--------------------------WFDLCRGPHVRSTGQV-KKFFKLMKVAGAYWR 209
           G                           W+DLC GPH+ STG++  K F L  VAGAYWR
Sbjct: 124 GSPDTGRTQHPEAEASLIEPLPVAPNEFWWDLCSGPHLNSTGELHSKAFMLESVAGAYWR 183

Query: 210 GDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFW 268
           GD  +  L RIYGTAW T ++L  YL+  EE+++RDHR L + + LF I ++ G G++FW
Sbjct: 184 GDETQAQLQRIYGTAWETPKQLKAYLHQKEEAQRRDHRLLGKNLKLFSIEDNAGGGLVFW 243

Query: 269 HRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
           H +G +I Q + +Y R+   +  YE + TP + +  LW+ SGH+D YR +MF     D  
Sbjct: 244 HPRGARIRQVIETYWRQAHTQGGYELLYTPHMANLDLWKTSGHFDFYRDSMF-----DQM 298

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
             + + + +KPMNCP HV  + H L SYRE P+R AE G+VYR E SG+LHGLMRVRGFT
Sbjct: 299 EVETQAYQIKPMNCPFHVLTYQHDLHSYREFPLRWAELGTVYRYERSGTLHGLMRVRGFT 358

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENI 447
           QDDAH+FC  +Q+ +E L + +L  ++  DFGF    V LSTRP+K VGSD +WD A   
Sbjct: 359 QDDAHIFCLPDQVADEILAVLDLTETVLSDFGFRDYEVNLSTRPDKSVGSDEIWDLATQD 418

Query: 448 MKGVLDTIKNSSQDRINTGVLL--GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSR 505
           ++  LD        R     L   G GAFYGPK +  ++DAIGR WQC TIQVDFNLP R
Sbjct: 419 LRTALD--------RKGWEYLTDEGGGAFYGPKIDLKIRDAIGRLWQCSTIQVDFNLPER 470

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAV 565
           F   YV +   +  P+MIHRA+FGS+ERF GI+IEN+ G+ PLWL+P+Q  +  ++ +  
Sbjct: 471 FKMEYVAADGTRQRPIMIHRAIFGSLERFFGILIENYAGDFPLWLAPVQIRLLVVSDAQR 530

Query: 566 EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
            YA E+   L+      E D   E +  +IR+ +++KIP++ + G KE   +++ IR
Sbjct: 531 PYALEVLEQLQQKGFRAEIDQTGERLGKQIRQSALEKIPVVAVVGQKEVEAQTLNIR 587


>gi|327536012|gb|AEA94846.1| threonine--tRNA ligase [Enterococcus faecalis OG1RF]
          Length = 660

 Score =  517 bits (1331), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 261/635 (41%), Positives = 402/635 (63%), Gaps = 23/635 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDP-VREGSIEIIT 63
           I +TFPDG++K F    T  DVA+SIS SLAKKA+A   NG + DL  P V +GS+EI+T
Sbjct: 18  IHITFPDGAVKPFDSGVTTFDVAKSISNSLAKKALAGKFNGVLIDLDRPIVEDGSLEIVT 77

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
           P+   +L ++RHS AH+MA A++ ++P ++  +GP I+ GFYYD D  E P ++++L  I
Sbjct: 78  PDHEDALGILRHSSAHLMANALRRLFPNIKFGVGPAIDSGFYYDTDNGESPVTAEDLPAI 137

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M +I+  ++P +++ +S  +A ELF    + YKVE++  +P  E +T+Y QG++ DL
Sbjct: 138 EAEMMKIVKENNPIVRKEISRAEALELFAD--DPYKVELITDLPEDEIITIYDQGDFVDL 195

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRG HV STG+++  FKL+ VAGAYWRG+S+  M+ RIYGTA+  +++L +++   EE++
Sbjct: 196 CRGVHVPSTGRIQ-VFKLLSVAGAYWRGNSDNHMMQRIYGTAFFDKKDLKEFIKMREEAK 254

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVL 300
           +RDHRKL +E+DLF ++++ GSG+ FW  KG  I +T+  Y+  ++I   Y+ + TP + 
Sbjct: 255 ERDHRKLGKELDLFMVSQEVGSGLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIMA 314

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D  L++ SGHWD Y  +MF        + D     L+PMNCP H+ V+ + + SYRELP+
Sbjct: 315 DVELYKTSGHWDHYHEDMFPPM----DMGDGEMLVLRPMNCPHHMMVYKNDIHSYRELPI 370

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  +   L++++Y DF  
Sbjct: 371 RIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVAVYADFNI 430

Query: 421 EKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
                +LS R     +K    DA+W+ A+ ++K  +D ++      ++     GE AFYG
Sbjct: 431 TDYRFRLSYRDPNNTDKYFDDDAMWEKAQAMLKAAMDELE------LDYFEAEGEAAFYG 484

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH-PVMIHRAVFGSIERFI 535
           PK +  +K A+G +    TIQ+DF LP RF+  YV    E  H PV+IHR +  ++ERF+
Sbjct: 485 PKLDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTMERFV 544

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
             + E +KG  P WL+PIQA +  ++  A  EYA EI   L++  L +E D RNE + YK
Sbjct: 545 AYLTEVYKGAFPTWLAPIQATIIPVSVEAHSEYAYEIKERLQAQGLRVEVDDRNEKMGYK 604

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           IR    +K+P  ++ GDKE  + ++ +RR+GS  T
Sbjct: 605 IRASQTQKVPYQLVVGDKEMEDATVNVRRYGSKET 639


>gi|57867165|ref|YP_188820.1| threonyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|251811076|ref|ZP_04825549.1| threonyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
 gi|282875897|ref|ZP_06284764.1| threonine--tRNA ligase [Staphylococcus epidermidis SK135]
 gi|71153576|sp|Q5HNM1|SYT_STAEQ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|57637823|gb|AAW54611.1| threonyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|251805411|gb|EES58068.1| threonyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
 gi|281294922|gb|EFA87449.1| threonine--tRNA ligase [Staphylococcus epidermidis SK135]
          Length = 645

 Score =  517 bits (1331), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 263/637 (41%), Positives = 407/637 (63%), Gaps = 23/637 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I + FPDG+ K F    T  D+A+SIS  L KKAVA   NG++ DL+ P+ ++G+IEIIT
Sbjct: 4   INIQFPDGNTKEFDKGTTTEDIAQSISPGLRKKAVAGKFNGQLVDLTRPLEQDGAIEIIT 63

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P    +L V+RHS AH+MA+A++ ++ +V+  +GP+IE GFYYDFD +   SSD+  +IE
Sbjct: 64  PGSEEALEVLRHSTAHLMAQALKRLYGDVKFGVGPVIEGGFYYDFDMDDKVSSDDFDKIE 123

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K M++I+  +   +++ +S EKA++ F  K + YK+E++++IP  E+VTLY QGE+ DLC
Sbjct: 124 KTMKQIVNENHKIVREVVSKEKAKDFF--KDDPYKLELIDAIPEDESVTLYTQGEFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RG HV ST ++K+F KL+  AGAYWRG+S+  ML RIYGTA+  +++L  +L  LEE  +
Sbjct: 182 RGVHVPSTSKIKEF-KLLSTAGAYWRGNSDNKMLQRIYGTAFFDKKDLKAHLKMLEERRE 240

Query: 244 RDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLD 301
           RDHRK+ ++++LF   +  G+G+  W   G  I + +  Y+  +++   Y+ + TP + +
Sbjct: 241 RDHRKIGKDLELFTNNQLVGAGLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLAN 300

Query: 302 QHLWQQSGHWDSYRANMF-AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
             L++ SGHWD Y+ +MF A+K  +D         L+PMNCP H+ ++ +   SYRELP+
Sbjct: 301 VDLYKTSGHWDHYQEDMFPAMKLDED-----EAMVLRPMNCPHHMMIYKNKPHSYRELPI 355

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G+++R E SG++ GL RVRG T +D+H+F   +Q+  E  ++ N+I  +YKDFGF
Sbjct: 356 RIAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVNMIQDVYKDFGF 415

Query: 421 EKIMVKLSTR-PE---KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           E    +LS R PE   K    D +W+ AE+++K   D +  + ++ I      GE AFYG
Sbjct: 416 EDYRFRLSYRDPEDKHKYFDDDEMWEKAESMLKEASDELGLTYEEAI------GEAAFYG 469

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK +  +K A+G++    T Q+DF LP RF+  Y+    E+  PV+IHR V  ++ERF+ 
Sbjct: 470 PKLDVQVKTAMGKEETLSTAQLDFLLPERFDLTYIGQDGEQHRPVVIHRGVVSTMERFVA 529

Query: 537 IMIENFKGNLPLWLSPIQA-IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            + E  KG  P WL+P+Q  I+        +YA+ + + LKS  + +E D RNE + YKI
Sbjct: 530 FLTEETKGAFPTWLAPMQVEIIPVNIDLHYDYARLLQDELKSQGVRVEIDDRNEKMGYKI 589

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
           RE  +KKIP  I+ GD+E   + + +R++GS   + V
Sbjct: 590 REAQMKKIPYQIVVGDQEVENQEVNVRKYGSEKQESV 626


>gi|315026573|gb|EFT38505.1| threonyl-tRNA synthetase [Enterococcus faecalis TX2137]
          Length = 660

 Score =  517 bits (1331), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 261/635 (41%), Positives = 402/635 (63%), Gaps = 23/635 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDP-VREGSIEIIT 63
           I +TFPDG++K F    T  DVA+SIS SLAKKA+A   NG + DL  P V +GS+EI+T
Sbjct: 18  IHITFPDGAVKPFDSGITTFDVAKSISNSLAKKALAGKFNGVLIDLDRPIVEDGSLEIVT 77

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
           P+   +L ++RHS AH+MA A++ ++P ++  +GP I+ GFYYD D  E P ++++L  I
Sbjct: 78  PDHEDALGILRHSAAHLMANALRRLFPNIKFGVGPAIDSGFYYDTDNGESPVTAEDLPAI 137

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M +I+  ++P +++ +S  +A ELF    + YKVE++  +P  E +T+Y QG++ DL
Sbjct: 138 EAEMMKIVKENNPIVRKEISRAEALELFAD--DPYKVELITDLPEDEIITVYDQGDFVDL 195

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRG HV STG+++  FKL+ VAGAYWRG+S+  M+ RIYGTA+  +++L +++   EE++
Sbjct: 196 CRGVHVPSTGRIQ-VFKLLSVAGAYWRGNSDNHMMQRIYGTAFFDKKDLKEFIKMREEAK 254

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVL 300
           +RDHRKL +E+DLF ++++ GSG+ FW  KG  I +T+  Y+  ++I   Y+ + TP + 
Sbjct: 255 ERDHRKLGKELDLFMVSQEVGSGLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIMA 314

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D  L++ SGHWD Y  +MF        + D     L+PMNCP H+ V+ + + SYRELP+
Sbjct: 315 DVELYKTSGHWDHYHEDMFPPM----DMGDGEMLVLRPMNCPHHMMVYKNDIHSYRELPI 370

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  +   L++++Y DF  
Sbjct: 371 RIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVAVYADFNI 430

Query: 421 EKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
                +LS R     +K    DA+W+ A+ ++K  +D ++      ++     GE AFYG
Sbjct: 431 TDYRFRLSYRDPNNTDKYFDDDAMWEKAQAMLKAAMDELE------LDYFEAEGEAAFYG 484

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH-PVMIHRAVFGSIERFI 535
           PK +  +K A+G +    TIQ+DF LP RF+  YV    E  H PV+IHR +  ++ERF+
Sbjct: 485 PKLDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTMERFV 544

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
             + E +KG  P WL+PIQA +  ++  A  EYA EI   L++  L +E D RNE + YK
Sbjct: 545 AYLTEVYKGAFPTWLAPIQATIIPVSVEAHSEYAYEIKERLQAQGLRVEVDDRNEKMGYK 604

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           IR    +K+P  ++ GDKE  + ++ +RR+GS  T
Sbjct: 605 IRASQTQKVPYQLVVGDKEMEDATVNVRRYGSKET 639


>gi|51245280|ref|YP_065164.1| threonyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
 gi|50876317|emb|CAG36157.1| probable threonyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
          Length = 657

 Score =  517 bits (1331), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 272/647 (42%), Positives = 407/647 (62%), Gaps = 18/647 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESI-SRSLAKKAVAVAINGKVCDLSDPVR-EGSIE 60
           SDI +T  DG     P+  T  +V  ++ S    K+ VA  +NG+V D + P+  + ++ 
Sbjct: 17  SDITVTIADGESTQVPISTTVGEVFVALQSNKQRKRTVAAILNGEVVDFNTPLSTDCTLS 76

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            +T + P +L+V+RHS AHIMA AV+ I+  +V+VAIGP +++GFYYDF +  PF+ ++ 
Sbjct: 77  PVTIDSPEALSVLRHSTAHIMAHAVRDIYGSDVKVAIGPSVDNGFYYDFLRSDPFTPEDF 136

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IE +M EI+   S F K   S  +A   FE ++E YKVE+++ +  +E V++Y  G++
Sbjct: 137 EKIEARMLEIVRTGSLFEKTLYSSAEAIARFEKEEEKYKVELIQDLDVEE-VSIYTVGDF 195

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPH+ ST  +  F KL++VAGAYWRGD  + +L RIYGTA+   + L ++L  +E
Sbjct: 196 ADLCRGPHLPSTSFIGAF-KLLRVAGAYWRGDEKKDVLQRIYGTAFFDSKALRKHLNNIE 254

Query: 240 ESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTP 297
           E++KRDHRKL +E++LF + +  G G+  W  KG ++   +  + + +  + DYE + TP
Sbjct: 255 EAKKRDHRKLGKELELFTMQDSIGPGLPLWLPKGARMRHQIEEFWKAEHYRHDYELLYTP 314

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +  Q LW+ SGH D Y  +M+A    D       T+ +KPMNCP HV V+    +SYR+
Sbjct: 315 HIARQDLWKTSGHLDFYADSMYAGMDIDGV-----TYQIKPMNCPFHVGVYKAKKRSYRD 369

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
            P+R  E G+VYR E +G+LHGLMRVR FTQDDAH+FC  EQ+ +E   I +  + I K 
Sbjct: 370 FPLRWCELGTVYRYERAGALHGLMRVRSFTQDDAHIFCRPEQLEDEIFNILDFNLFILKS 429

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF +  + LSTRPEK VG+D  WD + N +K  L+  K   +  I+ G    EG FYGP
Sbjct: 430 FGFSEYDIYLSTRPEKSVGTDENWDKSTNALKLALE--KKGLKYEIDPG----EGVFYGP 483

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  +KD +GR WQC T+QVDFNLP RF   YV S + +  P+MIHRA+ GS+ERFIG+
Sbjct: 484 KIDIKIKDQLGRSWQCSTVQVDFNLPERFELSYVGSDNSEHQPIMIHRALMGSLERFIGV 543

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE+  G  PLW SP+QA +  IT   +EY +++   L++  + +E D RNE +NYKIRE
Sbjct: 544 LIEHHAGAFPLWFSPVQARILNITDDQIEYGEKVYAELRAADIRVEKDLRNEKLNYKIRE 603

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
             + K P ++I GDKE  + ++ +R         +++ + + ++ +E
Sbjct: 604 AQLVKTPYMLIIGDKEKEDGTVTVRMRNGKNLDPMTVQEFVALVLEE 650


>gi|227519418|ref|ZP_03949467.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0104]
 gi|307280591|ref|ZP_07561639.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0860]
 gi|227073125|gb|EEI11088.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0104]
 gi|306503957|gb|EFM73174.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0860]
 gi|315145737|gb|EFT89753.1| threonyl-tRNA synthetase [Enterococcus faecalis TX2141]
 gi|315151718|gb|EFT95734.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0012]
 gi|315173904|gb|EFU17921.1| threonyl-tRNA synthetase [Enterococcus faecalis TX1346]
          Length = 660

 Score =  517 bits (1331), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 261/635 (41%), Positives = 402/635 (63%), Gaps = 23/635 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDP-VREGSIEIIT 63
           I +TFPDG++K F    T  DVA+SIS SLAKKA+A   NG + DL  P V +GS+EI+T
Sbjct: 18  IHITFPDGAVKPFDSGVTTFDVAKSISNSLAKKALAGKFNGVLIDLDRPIVEDGSLEIVT 77

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
           P+   +L ++RHS AH+MA A++ ++P ++  +GP I+ GFYYD D  E P ++++L  I
Sbjct: 78  PDHEDALGILRHSSAHLMANALRRLFPNIKFGVGPAIDSGFYYDTDNGESPVTAEDLPAI 137

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M +I+  ++P +++ +S  +A ELF    + YKVE++  +P  E +T+Y QG++ DL
Sbjct: 138 EAEMMKIVKENNPIVRKEISRAEALELFAD--DPYKVELITDLPEDEIITVYDQGDFVDL 195

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRG HV STG+++  FKL+ VAGAYWRG+S+  M+ RIYGTA+  +++L +++   EE++
Sbjct: 196 CRGVHVPSTGRIQ-VFKLLSVAGAYWRGNSDNHMMQRIYGTAFFDKKDLKEFIKMREEAK 254

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVL 300
           +RDHRKL +E+DLF ++++ GSG+ FW  KG  I +T+  Y+  ++I   Y+ + TP + 
Sbjct: 255 ERDHRKLGKELDLFMVSQEVGSGLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIMA 314

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D  L++ SGHWD Y  +MF        + D     L+PMNCP H+ V+ + + SYRELP+
Sbjct: 315 DVELYKTSGHWDHYHEDMFPPM----DMGDGEMLVLRPMNCPHHMMVYKNDIHSYRELPI 370

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  +   L++++Y DF  
Sbjct: 371 RIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVAVYADFNI 430

Query: 421 EKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
                +LS R     +K    DA+W+ A+ ++K  +D ++      ++     GE AFYG
Sbjct: 431 TDYRFRLSYRDPNNTDKYFDDDAMWEKAQAMLKAAMDELE------LDYFEAEGEAAFYG 484

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH-PVMIHRAVFGSIERFI 535
           PK +  +K A+G +    TIQ+DF LP RF+  YV    E  H PV+IHR +  ++ERF+
Sbjct: 485 PKLDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTMERFV 544

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
             + E +KG  P WL+PIQA +  ++  A  EYA EI   L++  L +E D RNE + YK
Sbjct: 545 AYLTEVYKGAFPTWLAPIQATIIPVSVEAHSEYAYEIKERLQAQGLRVEVDDRNEKMGYK 604

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           IR    +K+P  ++ GDKE  + ++ +RR+GS  T
Sbjct: 605 IRASQTQKVPYQLVVGDKEMEDATVNVRRYGSKET 639


>gi|27904622|ref|NP_777748.1| threonyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
 gi|29839437|sp|P59554|SYT_BUCBP RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|27904019|gb|AAO26853.1| threonyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
          Length = 643

 Score =  517 bits (1331), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 253/626 (40%), Positives = 400/626 (63%), Gaps = 20/626 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI- 59
           MP+   + F DG+ + +P   +  D+ + +S +  +  +   +NG   D +  V   SI 
Sbjct: 1   MPT---IKFIDGTCRVYPGSISVLDILKDVSPNSVQDFMFGCVNGISVDRNAIVTNDSIV 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           + +   D  +L +IR+SC  ++ +AV+ +WP  ++    ++E+GF+ D + +  F+   L
Sbjct: 58  KFVYKTDQSTLDIIRYSCICLLGKAVKKLWPSSKIGESDVLENGFFCDIEVDFSFNETSL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN--VTLYRQG 177
             +E  M+++I +      +  S +KA  +F+++ E YK+ +L+ +    N  V+L    
Sbjct: 118 HLLEACMRQMINKKYKIYTKTFSLKKASTIFKNRNETYKLFLLDRLVNFSNQVVSLCFHE 177

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           E+ D+ +   V +    + F +L K +G YW+G     +L RIYGT+W T+ +L ++L  
Sbjct: 178 EYIDIQKKISVPNIFLCRNF-RLQKFSGVYWKGKRENKVLQRIYGTSWITRIQLEKHLDN 236

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINT 296
           +++ + RDHRK+++ +DL+HI ED  G+IFWHR GW +FQ L   +R K+ K +Y+E+ T
Sbjct: 237 VKKLDSRDHRKISKILDLYHIQEDLPGMIFWHRNGWIVFQELKKLIRVKLRKYNYQEVKT 296

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P ++++ +W+ SGH D+Y+ +MF V C+ +       + +KPMNCPGHV +FNH ++SYR
Sbjct: 297 PVMMNKKIWKDSGHLDNYKESMFMV-CSSNF-----EYGIKPMNCPGHVQIFNHVVRSYR 350

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +LP+R++EFGS +RNEPSG+LHGLMR+R FTQDDAH+FC ++Q+ +E      ++  IYK
Sbjct: 351 DLPIRISEFGSCHRNEPSGALHGLMRIRNFTQDDAHIFCREDQICSEVSNCIRMVYEIYK 410

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
            FGF+KI+V+LSTRP+ R+G+D +WD AEN      D   +  + +I      GEGAFYG
Sbjct: 411 IFGFKKILVRLSTRPKNRIGNDNIWDKAEN------DLATSLRESKIEFEYQHGEGAFYG 464

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK E  L D++GR WQC TIQ+DF LP    AFY++ ++E+  P+++HRAV GSIERFIG
Sbjct: 465 PKIELSLFDSLGRVWQCATIQLDFCLPINLKAFYIDHNNERKVPIIVHRAVLGSIERFIG 524

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           I+IE + GN P WL+PIQ ++  + S+ ++Y + +     +  +  E D RNETI+YKIR
Sbjct: 525 ILIEEYIGNFPTWLAPIQVVLANVNSNHLQYIKLLYKEFYALGIRSEIDSRNETISYKIR 584

Query: 597 EHSIKKIPIIIICGDKEASERSIGIR 622
           EH  +KIP IIICGDKE    +I +R
Sbjct: 585 EHIARKIPYIIICGDKEVKNNTITLR 610


>gi|257087763|ref|ZP_05582124.1| threonyl-tRNA synthetase [Enterococcus faecalis D6]
 gi|256995793|gb|EEU83095.1| threonyl-tRNA synthetase [Enterococcus faecalis D6]
          Length = 645

 Score =  517 bits (1331), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 261/635 (41%), Positives = 402/635 (63%), Gaps = 23/635 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDP-VREGSIEIIT 63
           I +TFPDG++K F    T  DVA+SIS SLAKKA+A   NG + DL  P V +GS+EI+T
Sbjct: 3   IHITFPDGAVKPFDSGITTFDVAKSISNSLAKKALAGKFNGVLIDLDRPIVEDGSLEIVT 62

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
           P+   +L ++RHS AH+MA A++ ++P ++  +GP I+ GFYYD D  E P ++++L  I
Sbjct: 63  PDHEDALGILRHSAAHLMANALRRLFPNIKFGVGPAIDSGFYYDTDNGESPVTAEDLPAI 122

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M +I+  ++P +++ +S  +A ELF    + YKVE++  +P  E +T+Y QG++ DL
Sbjct: 123 EAEMMKIVKENNPIVRKEISRAEALELFAD--DPYKVELITDLPEDEIITVYDQGDFVDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRG HV STG+++  FKL+ VAGAYWRG+S+  M+ RIYGTA+  +++L +++   EE++
Sbjct: 181 CRGVHVPSTGRIQ-VFKLLSVAGAYWRGNSDNHMMQRIYGTAFFDKKDLKEFIKMREEAK 239

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVL 300
           +RDHRKL +E+DLF ++++ GSG+ FW  KG  I +T+  Y+  ++I   Y+ + TP + 
Sbjct: 240 ERDHRKLGKELDLFMVSQEVGSGLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIMA 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D  L++ SGHWD Y  +MF        + D     L+PMNCP H+ V+ + + SYRELP+
Sbjct: 300 DVELYKTSGHWDHYHEDMFPPM----DMGDGEMLVLRPMNCPHHMMVYKNDIHSYRELPI 355

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  +   L++++Y DF  
Sbjct: 356 RIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVAVYADFNI 415

Query: 421 EKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
                +LS R     +K    DA+W+ A+ ++K  +D ++      ++     GE AFYG
Sbjct: 416 TDYRFRLSYRDPNNTDKYFDDDAMWEKAQAMLKAAMDELE------LDYFEAEGEAAFYG 469

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH-PVMIHRAVFGSIERFI 535
           PK +  +K A+G +    TIQ+DF LP RF+  YV    E  H PV+IHR +  ++ERF+
Sbjct: 470 PKLDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTMERFV 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
             + E +KG  P WL+PIQA +  ++  A  EYA EI   L++  L +E D RNE + YK
Sbjct: 530 AYLTEVYKGAFPTWLAPIQATIIPVSVEAHSEYAYEIKERLQAQGLRVEVDDRNEKMGYK 589

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           IR    +K+P  ++ GDKE  + ++ +RR+GS  T
Sbjct: 590 IRASQTQKVPYQLVVGDKEMEDATVNVRRYGSKET 624


>gi|219113189|ref|XP_002186178.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|209583028|gb|ACI65648.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 684

 Score =  517 bits (1331), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 271/577 (46%), Positives = 364/577 (63%), Gaps = 29/577 (5%)

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF------DKE----- 111
           T ++   L  IRHS AH+MA AVQ I+PE QV IGP I+ GFYYDF      D+E     
Sbjct: 75  TNDNDEELLRIRHSSAHVMAMAVQRIFPEAQVTIGPWIDSGFYYDFFFPERTDEESGETI 134

Query: 112 --QPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKE 169
             +  S  +L  ++K M +II +D P  ++ +S E+AR   E   E +K+EIL+SI   E
Sbjct: 135 PARKLSEQDLKDVKKAMDKIIGKDYPISREDVSREEARRRIEKIGEPFKLEILDSIKT-E 193

Query: 170 NVTLYRQG-EWFDLCRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNT 227
            +TLY  G EW+DLC GPHV STG++ KK  +L  VAGAYWRGD NR ML RIY TAW  
Sbjct: 194 PITLYHIGDEWWDLCAGPHVDSTGKLPKKAIQLQSVAGAYWRGDENREMLQRIYATAWKD 253

Query: 228 QQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK 286
            Q+L QY   LEE++KRDHR L +++DLF I ED G G++FWH KG K+ + +  + +  
Sbjct: 254 PQQLKQYKKMLEEAKKRDHRMLGKKLDLFSIQEDAGGGLVFWHPKGSKVRRMIEDFWKDA 313

Query: 287 -IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            I+D Y+ + +P + +  LW+ SGH+D YRA+MF     D    +   + +KPMNCP H 
Sbjct: 314 HIQDGYDVVYSPHIANIDLWKTSGHFDFYRADMF-----DQMDVENEQYQIKPMNCPFHC 368

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            ++   L+SYR+LP R AE G+VYR E SG+LHGLMRVRGFTQDDAH+FC  EQ+ +E +
Sbjct: 369 LMYKDELRSYRDLPFRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQLQDEIV 428

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
            + +L  +I   FGF+K  V LSTRPEK VGSD +WD A   ++G L  +K       + 
Sbjct: 429 GVLDLTETILSRFGFDKYDVMLSTRPEKSVGSDEIWDAATVALEGAL-KVKG-----WDY 482

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
            V  G GAFYGPK +  ++DAIGR WQC T+Q DFNLP RF   Y ++   +  P+M+HR
Sbjct: 483 NVDEGGGAFYGPKIDLKIRDAIGRQWQCSTVQCDFNLPERFGLEYASADGTRERPIMVHR 542

Query: 526 AVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD 585
           A+FGSIERF GI+IEN  G+ PLWL+P Q  +  +T +  EY  EIA       L IE D
Sbjct: 543 AIFGSIERFFGILIENCSGDFPLWLAPTQLKLLPVTDAVHEYCNEIAAKALKMGLRIEVD 602

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
             +E +  +IR     +IP++ + G KE    S+ +R
Sbjct: 603 RGSERLAKQIRNAEQARIPVMAVVGMKEMESNSLAVR 639


>gi|257421590|ref|ZP_05598580.1| threonyl-tRNA synthetase [Enterococcus faecalis X98]
 gi|257163414|gb|EEU93374.1| threonyl-tRNA synthetase [Enterococcus faecalis X98]
          Length = 645

 Score =  517 bits (1331), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 261/635 (41%), Positives = 402/635 (63%), Gaps = 23/635 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDP-VREGSIEIIT 63
           I +TFPDG++K F    T  DVA+SIS SLAKKA+A   NG + DL  P V +GS+EI+T
Sbjct: 3   IHITFPDGAVKPFDSGITTFDVAKSISNSLAKKALAGKFNGVLIDLDRPIVEDGSLEIVT 62

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
           P+   +L ++RHS AH+MA A++ ++P ++  +GP I+ GFYYD D  E P ++++L  I
Sbjct: 63  PDHEDALGILRHSAAHLMANALRRLFPNIKFGVGPAIDSGFYYDTDNGESPVTAEDLPAI 122

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M +I+  ++P +++ +S  +A ELF    + YKVE++  +P  E +T+Y QG++ DL
Sbjct: 123 EAEMMKIVKENNPIVRKEISRAEALELFAD--DPYKVELITDLPEDEIITVYDQGDFVDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRG HV STG+++  FKL+ VAGAYWRG+S+  M+ RIYGTA+  +++L +++   EE++
Sbjct: 181 CRGVHVPSTGRIQ-VFKLLSVAGAYWRGNSDNHMMQRIYGTAFFDKKDLKEFIKMREEAK 239

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVL 300
           +RDHRKL +E+DLF ++++ GSG+ FW  KG  I +T+  Y+  ++I   Y+ + TP + 
Sbjct: 240 ERDHRKLGKELDLFMVSQEVGSGLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIMA 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D  L++ SGHWD Y  +MF        + D     L+PMNCP H+ V+ + + SYRELP+
Sbjct: 300 DVELYKTSGHWDHYHEDMFPPM----DMGDGEMLVLRPMNCPHHMMVYKNDIHSYRELPI 355

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  +   L++++Y DF  
Sbjct: 356 RIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVAVYADFNI 415

Query: 421 EKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
                +LS R     +K    DA+W+ A+ ++K  +D ++      ++     GE AFYG
Sbjct: 416 TDYRFRLSYRDPNNTDKYFDDDAMWEKAQAMLKAAMDELE------LDYFEAEGEAAFYG 469

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH-PVMIHRAVFGSIERFI 535
           PK +  +K A+G +    TIQ+DF LP RF+  YV    E  H PV+IHR +  ++ERF+
Sbjct: 470 PKLDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTMERFV 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
             + E +KG  P WL+PIQA +  ++  A  EYA EI   L++  L +E D RNE + YK
Sbjct: 530 AYLTEVYKGAFPTWLAPIQATIIPVSVEAHSEYAYEIKERLQAQGLRVEVDDRNEKMGYK 589

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           IR    +K+P  ++ GDKE  + ++ +RR+GS  T
Sbjct: 590 IRASQTQKVPYQLVVGDKEMEDATVNVRRYGSKET 624


>gi|149919496|ref|ZP_01907976.1| hypothetical protein PPSIR1_10610 [Plesiocystis pacifica SIR-1]
 gi|149819621|gb|EDM79048.1| hypothetical protein PPSIR1_10610 [Plesiocystis pacifica SIR-1]
          Length = 590

 Score =  516 bits (1330), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 251/591 (42%), Positives = 366/591 (61%), Gaps = 16/591 (2%)

Query: 61  IITPEDPR--SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           +I P  P    L  +RHS AH+MA+A++ +WP+ ++A GP  EDGFYYD   +   S D+
Sbjct: 12  MIDPSVPELSKLETLRHSAAHVMADAIKQLWPDAKLAFGPHTEDGFYYDIQMDHRLSPDD 71

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
              IE KM+ I     PF ++ +S + AR LFE+  E +KVE + SIP    +TLYR G+
Sbjct: 72  FPAIEDKMKAIAKARHPFEREEVSRDAARALFEAAGEDFKVETIASIPEDATLTLYRSGD 131

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + DLCRGPHV+ TG V+ F KL++VAGAYWRG+   PML R+YGTA+  +++L ++L  L
Sbjct: 132 FVDLCRGPHVKETGAVRAF-KLLRVAGAYWRGNEKGPMLQRLYGTAFADKKQLKKHLAAL 190

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
           EE++KRDHRKL  E+ LFH         F+  +G  I+  L  Y+R+   K DY E+ TP
Sbjct: 191 EEAKKRDHRKLGVELGLFHFDPIAPASPFFTERGATIYNLLQEYVRKLYRKYDYGEVITP 250

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           Q+ D  L++ SGH+D Y+ NMF+ +       D R F +KPMNCPGH  ++    KSYRE
Sbjct: 251 QIFDMELFRTSGHYDHYKDNMFSSEI------DNREFGVKPMNCPGHCVLYRQTRKSYRE 304

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+A+FG ++R E +G  HGL RVR F QDDAHVFC  +Q+  E   + ++I+  Y+ 
Sbjct: 305 LPIRMADFGRLHRYERAGVTHGLTRVRTFCQDDAHVFCRLDQLEQEIESVTSMILETYEA 364

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFE + +++STRP+  +G    WD AE  +  VL      ++  IN  +  G+GAFYGP
Sbjct: 365 FGFEDVEIEISTRPDSYLGELETWDRAEKALADVL------TRQGINYAINEGDGAFYGP 418

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K ++ ++DA+ R WQ GT Q+DF LP RF   YV++   +  PVMIHRA+ GS+ERF G+
Sbjct: 419 KIDFGVRDALRRPWQLGTCQLDFQLPERFKLEYVSADDARARPVMIHRAMLGSLERFFGV 478

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
            +E+  G  P WL+P+Q  +  IT +  E+A+++    K+  L + TD R+E +  KIRE
Sbjct: 479 YLEHTAGKFPTWLAPVQIAILPITDAHAEWARKVEAACKAAGLRVTTDDRSEKLGLKIRE 538

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
            ++ ++P +++ GDKE   + +  R     T    SL D +  +  E   P
Sbjct: 539 ATLLRVPYMLVLGDKEVEAQGVAPRTRDGKTGALESLEDFVARIAVEGSVP 589


>gi|315641145|ref|ZP_07896224.1| threonine--tRNA ligase [Enterococcus italicus DSM 15952]
 gi|315483153|gb|EFU73670.1| threonine--tRNA ligase [Enterococcus italicus DSM 15952]
          Length = 650

 Score =  516 bits (1330), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 262/635 (41%), Positives = 399/635 (62%), Gaps = 23/635 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           IK+TFPDG++K F    T  ++AESIS+SL KKA+A  +NGK+ DL+ P+ E + IEI+T
Sbjct: 2   IKITFPDGAVKEFEQGVTTKEIAESISKSLVKKALAGKVNGKLVDLTLPLEEDAKIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
           P+   +L ++RHS AH+MA A+  ++P +   +GP I+ GFYYD D  E P ++++L  I
Sbjct: 62  PDHEDALPLLRHSSAHLMAHAMHRLYPGIHFGVGPAIDSGFYYDTDNGEHPITAEDLPAI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M ++I  + P  +  LS E+A ELF S  + YKVE++  +PA E +T Y+QG++ DL
Sbjct: 122 EVEMMKVIKENHPIERMVLSKEEALELFAS--DPYKVELITELPADEVITAYKQGDFVDL 179

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG+++  FKL+ VAGAYWRG S+  M+ RIYGTA+  +++L +++   EE++
Sbjct: 180 CRGPHVPSTGRIQ-VFKLLSVAGAYWRGKSDNHMMQRIYGTAFFDKKDLKEFIRMREEAK 238

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVL 300
           +RDHRKL +E+DLF ++++ GSG+ FW  KG  I + +  Y+  +++   Y  + TP + 
Sbjct: 239 ERDHRKLGKELDLFMVSKEVGSGLPFWLPKGATIRRIIERYIVDKEVSLGYMHVYTPIMA 298

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D +L++ SGHWD Y  +MF        + D     L+PMNCP H+ V+ + + SYRELP+
Sbjct: 299 DVNLYKTSGHWDHYHEDMFPPM----DMGDGEMLVLRPMNCPHHIMVYKNDIHSYRELPI 354

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G ++R E SG+L GL RVR  T +D H F   +Q+  E  +  +L+ ++YKDFG 
Sbjct: 355 RIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKEEFKRTLDLMTAVYKDFGI 414

Query: 421 EKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           +    +LS R     +K    D +W++A+ ++K  +D +       ++     GE AFYG
Sbjct: 415 DDYRFRLSYRDPNNTDKYFDDDKMWENAQKMIKAAMDELG------LDYFEAEGEAAFYG 468

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH-PVMIHRAVFGSIERFI 535
           PK +  +K A+G +    TIQ+DF LP RF   YV    E  H PVMIHR +  ++ERF+
Sbjct: 469 PKLDVQVKTALGMEETLSTIQLDFLLPERFELTYVGEDGENSHRPVMIHRGIVSTMERFV 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
             + E +KG  P WL+P+Q  +  ++  A  EYA E+   L    +  E D RNE + YK
Sbjct: 529 AYLTEVYKGAFPTWLAPVQVEIIPVSVDAHSEYAYEVKERLLEKGIRAEVDGRNEKMGYK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           IR    +KIP  ++ GD+E ++ ++ IRR+GS  T
Sbjct: 589 IRAAQTQKIPYQLVVGDQEMNDATVNIRRYGSKET 623


>gi|330836194|ref|YP_004410835.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Spirochaeta
           coccoides DSM 17374]
 gi|329748097|gb|AEC01453.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Spirochaeta
           coccoides DSM 17374]
          Length = 588

 Score =  516 bits (1330), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 249/572 (43%), Positives = 366/572 (63%), Gaps = 16/572 (2%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           L  IRHS AH+MAEAV  ++P  Q+AIGP+IE+GFYYDFD  +P   D+L +I ++M++I
Sbjct: 17  LERIRHSMAHVMAEAVLQMFPTAQIAIGPVIENGFYYDFDLPRPLVKDDLEEITERMKKI 76

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
           IA D PF++  +S ++AR  F  +K  YKVE+L++IPA E+V+LY QG + DLCRGPHV 
Sbjct: 77  IAEDKPFIRTVVSRDEARRRFSDQK--YKVELLDAIPADEDVSLYDQGGFIDLCRGPHVA 134

Query: 190 STGQVKK-FFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRK 248
           ST +++   F L+ +AGAYWRG    PML+RIYGTAW   ++L  YL  LE+ EKRD+R+
Sbjct: 135 STKELRSDSFALLNIAGAYWRGKETNPMLTRIYGTAWANPKDLRLYLQHLEDVEKRDNRR 194

Query: 249 LAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQ 306
           L +E DLF + E+ G G+++WH +G ++   + ++ R +  K+ YE + +P V    LW+
Sbjct: 195 LGKEQDLFSLHEEAGPGLVYWHPRGARVRVAIENFWRDEHYKNGYEMVFSPHVGRSWLWE 254

Query: 307 QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFG 366
            SGH   Y+ +M+     D +      + +KPMNCP H+ ++N+  +SYR+LP+R+AE G
Sbjct: 255 TSGHLGFYKDSMYPAMEMDKS-----DYYVKPMNCPFHIMIYNNSKRSYRDLPIRMAELG 309

Query: 367 SVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK 426
           +VYR E +G+LHGLMRVRGFTQDDAH+FCT EQM +E  K+    + + + FGF+ +   
Sbjct: 310 TVYRYEKAGALHGLMRVRGFTQDDAHLFCTPEQMDDEIRKVLEFSLYMLRSFGFQDVKAY 369

Query: 427 LSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDA 486
           LSTRPE+ VG    WD A   ++  ++      ++ +   V  G GAFYGPK +  +KDA
Sbjct: 370 LSTRPEESVGERERWDAATKALRNAIE------KEGLAYEVDEGGGAFYGPKIDLKVKDA 423

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNL 546
           IGR+WQ  T+Q DFN+  RF   +V+   ++  P MIHRA+ GSIERF G++IEN+ G  
Sbjct: 424 IGREWQLSTVQFDFNMSDRFQMTFVDKDGQEKRPYMIHRALLGSIERFFGVLIENYAGAF 483

Query: 547 PLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPII 606
           P WL+P Q +V  +  +   YA  + + L+   L  + D  ++ +N KIR   + KIP  
Sbjct: 484 PPWLAPEQIMVVPVGEAFFPYATALRDRLRKEGLRADADLSDDRMNAKIRNAQLHKIPYQ 543

Query: 607 IICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           ++ G++E SE  + +R         V   D I
Sbjct: 544 LVVGEREQSEDKVSVRYRNGNKANDVPTADFI 575


>gi|307286857|ref|ZP_07566939.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0109]
 gi|306502072|gb|EFM71358.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0109]
 gi|315156485|gb|EFU00502.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0043]
 gi|315166285|gb|EFU10302.1| threonyl-tRNA synthetase [Enterococcus faecalis TX1302]
 gi|315169145|gb|EFU13162.1| threonyl-tRNA synthetase [Enterococcus faecalis TX1341]
          Length = 660

 Score =  516 bits (1330), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 261/635 (41%), Positives = 402/635 (63%), Gaps = 23/635 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDP-VREGSIEIIT 63
           I +TFPDG++K F    T  DVA+SIS SLAKKA+A   NG + DL  P V +GS+EI+T
Sbjct: 18  IHITFPDGAVKPFDSGITTFDVAKSISNSLAKKALAGKFNGVLIDLDRPIVEDGSLEIVT 77

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
           P+   +L ++RHS AH+MA A++ ++P ++  +GP I+ GFYYD D  E P ++++L  I
Sbjct: 78  PDHEDALGILRHSAAHLMANALRRLFPNIKFGVGPAIDSGFYYDTDNGESPVTAEDLPAI 137

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M +I+  ++P +++ +S  +A ELF    + YKVE++  +P  E +T+Y QG++ DL
Sbjct: 138 EAEMMKIVKENNPIVRKEISRAEALELFAD--DPYKVELITDLPEDEIITVYDQGDFVDL 195

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRG HV STG+++  FKL+ VAGAYWRG+S+  M+ RIYGTA+  +++L +++   EE++
Sbjct: 196 CRGVHVPSTGRIQ-VFKLLSVAGAYWRGNSDNHMMQRIYGTAFFDKKDLKEFIKMREEAK 254

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVL 300
           +RDHRKL +E+DLF ++++ GSG+ FW  KG  I +T+  Y+  ++I   Y+ + TP + 
Sbjct: 255 ERDHRKLGKELDLFMVSQEVGSGLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIMA 314

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D  L++ SGHWD Y  +MF        + D     L+PMNCP H+ V+ + + SYRELP+
Sbjct: 315 DVELYKTSGHWDHYHEDMFPPM----DMGDGEMLVLRPMNCPHHMMVYKNDIHSYRELPI 370

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  +   L++++Y DF  
Sbjct: 371 RIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVAVYADFNI 430

Query: 421 EKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
                +LS R     +K    DA+W+ A+ ++K  +D ++      ++     GE AFYG
Sbjct: 431 TDYRFRLSYRDPNNTDKYFDDDAMWEKAQAMLKAAMDELE------LDYFEAEGEAAFYG 484

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH-PVMIHRAVFGSIERFI 535
           PK +  +K A+G +    TIQ+DF LP RF+  YV    E  H PV+IHR +  ++ERF+
Sbjct: 485 PKLDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTMERFV 544

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
             + E +KG  P WL+PIQA +  ++  A  EYA EI   L++  L +E D RNE + YK
Sbjct: 545 AYLTEVYKGAFPTWLAPIQATIIPVSVEAHSEYAYEIKERLQAQGLRVEVDDRNEKMGYK 604

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           IR    +K+P  ++ GDKE  + ++ +RR+GS  T
Sbjct: 605 IRASQTQKVPYQLVVGDKEMEDATVNVRRYGSKET 639


>gi|315033108|gb|EFT45040.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0017]
          Length = 672

 Score =  516 bits (1330), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 261/635 (41%), Positives = 402/635 (63%), Gaps = 23/635 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDP-VREGSIEIIT 63
           I +TFPDG++K F    T  DVA+SIS SLAKKA+A   NG + DL  P V +GS+EI+T
Sbjct: 30  IHITFPDGAVKPFDSGVTTFDVAKSISNSLAKKALAGKFNGVLIDLDRPIVEDGSLEIVT 89

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
           P+   +L ++RHS AH+MA A++ ++P ++  +GP I+ GFYYD D  E P ++++L  I
Sbjct: 90  PDHEDALGILRHSSAHLMANALRRLFPNIKFGVGPAIDSGFYYDTDNGESPVTAEDLPAI 149

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M +I+  ++P +++ +S  +A ELF    + YKVE++  +P  E +T+Y QG++ DL
Sbjct: 150 EAEMMKIVKENNPIVRKEISRAEALELFAD--DPYKVELITDLPEDEIITVYDQGDFVDL 207

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRG HV STG+++  FKL+ VAGAYWRG+S+  M+ RIYGTA+  +++L +++   EE++
Sbjct: 208 CRGVHVPSTGRIQ-VFKLLSVAGAYWRGNSDNHMMQRIYGTAFFDKKDLKEFIKMREEAK 266

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVL 300
           +RDHRKL +E+DLF ++++ GSG+ FW  KG  I +T+  Y+  ++I   Y+ + TP + 
Sbjct: 267 ERDHRKLGKELDLFMVSQEVGSGLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIMA 326

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D  L++ SGHWD Y  +MF        + D     L+PMNCP H+ V+ + + SYRELP+
Sbjct: 327 DVELYKTSGHWDHYHEDMFPPM----DMGDGEMLVLRPMNCPHHMMVYKNDIHSYRELPI 382

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  +   L++++Y DF  
Sbjct: 383 RIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVAVYADFNI 442

Query: 421 EKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
                +LS R     +K    DA+W+ A+ ++K  +D ++      ++     GE AFYG
Sbjct: 443 TDYRFRLSYRDPNNTDKYFDDDAMWEKAQAMLKAAMDELE------LDYFEAEGEAAFYG 496

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH-PVMIHRAVFGSIERFI 535
           PK +  +K A+G +    TIQ+DF LP RF+  YV    E  H PV+IHR +  ++ERF+
Sbjct: 497 PKLDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTMERFV 556

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
             + E +KG  P WL+PIQA +  ++  A  EYA EI   L++  L +E D RNE + YK
Sbjct: 557 AYLTEVYKGAFPTWLAPIQATIIPVSVEAHSEYAYEIKERLQAQGLRVEVDDRNEKMGYK 616

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           IR    +K+P  ++ GDKE  + ++ +RR+GS  T
Sbjct: 617 IRASQTQKVPYQLVVGDKEMEDATVNVRRYGSKET 651


>gi|326800360|ref|YP_004318179.1| threonyl-tRNA synthetase [Sphingobacterium sp. 21]
 gi|326551124|gb|ADZ79509.1| threonyl-tRNA synthetase [Sphingobacterium sp. 21]
          Length = 641

 Score =  516 bits (1330), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 264/629 (41%), Positives = 399/629 (63%), Gaps = 19/629 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           IK+T PDGSI+ +    T   +A+SIS  LA+  +A  ++G+V D + P+ ++ S+ ++T
Sbjct: 2   IKITLPDGSIREYEKGITSLQIAQSISEGLARNVLAAEVDGQVWDATRPIEKDASVRLLT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQI 122
             D    +   HS AH+MAEA+++++P  +  IGP IE GFYYD D  ++PFSSD+  +I
Sbjct: 62  WNDKDGKSTFWHSSAHLMAEALEALYPGTKFGIGPAIETGFYYDVDFGDRPFSSDDFKKI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E KM E+    S +++Q +S   A   F  K + YK+++++ + A  ++T Y QG + DL
Sbjct: 122 EDKMLELARTKSDYVRQQVSKSDALAYFTEKGDEYKLDLIKDL-ADGSITFYTQGNFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ +TG +K   KL  VAGAYWRGD +R  L+RIYG  +    EL  YL+ +EE++
Sbjct: 181 CRGPHIPNTGFIKAI-KLTNVAGAYWRGDESRKQLTRIYGVTFPKASELADYLHMIEEAK 239

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           KRDHRKL +E++LF  +E  G G+  W  KG  + Q L+ +++R ++K  YE + TP + 
Sbjct: 240 KRDHRKLGKELELFAFSERVGMGLPLWLPKGAALRQKLVDFLQRAQMKAGYEPVVTPHIG 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            ++L+  SGH++ Y A+ F       T ++   F LKPMNCP H  ++    +SY++LPV
Sbjct: 300 HKNLYVTSGHYEKYGADSFQ---PIRTPQEGEEFLLKPMNCPHHCEIYKTKPRSYKDLPV 356

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R AEFG+VYR E SG LHGL RVRGFTQDDAH+FC  +Q+ +E  K+ +L++ ++K  GF
Sbjct: 357 RFAEFGTVYRYEQSGELHGLTRVRGFTQDDAHLFCRPDQVKDEFKKVIDLVLYVFKALGF 416

Query: 421 EKIMVKLSTR-PE---KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           +    ++S R PE   K +GS+      EN +      ++ + +  + T   LGE AFYG
Sbjct: 417 DDYTAQISLRDPENKGKYIGSE------ENWLLAEAAIVEAAEEKGLKTVTELGEAAFYG 470

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK ++++KDA+GR WQ GTIQVD+NLP RF   Y  S ++K  PVMIHRA FGS+ERF+ 
Sbjct: 471 PKLDFMVKDALGRKWQLGTIQVDYNLPERFELEYTGSDNQKHRPVMIHRAPFGSLERFVA 530

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           ++IE+  G  PLWL+P Q I+  ++    EYA+++   L +  +    D R+E +  KIR
Sbjct: 531 VLIEHCAGEFPLWLTPEQFIILPVSEKYEEYAKKLLESLNNTDIRGLIDLRDEKVGRKIR 590

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFG 625
           +  +KKIP ++I G+KE    +I +R+ G
Sbjct: 591 DAEVKKIPYMLIVGEKEVENGTISVRKHG 619


>gi|317129892|ref|YP_004096174.1| threonyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
 gi|315474840|gb|ADU31443.1| threonyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
          Length = 645

 Score =  516 bits (1330), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 256/651 (39%), Positives = 405/651 (62%), Gaps = 19/651 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDP-VREGSI 59
           M   I +TFPDG+ K F    T  D+A SIS  L K A+A  ++G+  DL  P V  G++
Sbjct: 1   MSDQIVMTFPDGAKKEFSKGVTTEDIAGSISPGLKKNALAGKVDGQYVDLRQPLVENGNL 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT +    L ++RHS AH+MA+AV+ ++  V++ +GP+IE GFYYD D E   + ++L
Sbjct: 61  EIITYDSQDGLEILRHSTAHLMAQAVKRLYENVKLGVGPVIEGGFYYDIDMEHSLTPEDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IEK+M+ I+  +    +  +S E A + ++   +  K+E+LE IP  + +++Y QGE+
Sbjct: 121 EKIEKEMKRIVDENLEIRRVEVSRETAVQRYKEIGDDLKLELLEDIPEGDTISIYEQGEF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRG H+ ST ++KKF KLM V GAYWRGDS   ML RIYGTA+  QQ+L  +L  LE
Sbjct: 181 FDLCRGVHLPSTSKIKKF-KLMTVNGAYWRGDSKNKMLQRIYGTAFPKQQQLEDHLKMLE 239

Query: 240 ESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTP 297
           E+++RDHRKL +E+ +F I +  G G+  W  KG  I +T+  Y+   + +  Y+ + TP
Sbjct: 240 EAKERDHRKLGKELGIFTINQKVGQGLPLWLPKGATIRRTIERYIVDLEERLGYDHVYTP 299

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    L++ SGHWD Y  +MF     D+         L+PMNCP H+ ++ + L SYR 
Sbjct: 300 VLGSVELYKTSGHWDHYHEDMFPTMEMDN-----EDLVLRPMNCPHHMMIYKNQLHSYRN 354

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LPVR+AE G+++R+E SG+L GL RVR  T +DAH+FC  +Q+ +E +++  L+ ++Y+D
Sbjct: 355 LPVRIAELGTMHRHEMSGALAGLQRVRAMTLNDAHIFCRPDQLKDEFIRVVELVQNVYQD 414

Query: 418 FGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           FG +    +LS R     EK V +D +W+ A+ ++K   + +++ + D +      GE A
Sbjct: 415 FGIDDYYFRLSYRDPEDKEKYVDNDEMWEKAQAMLK---EAMEDMNVDYVEAE---GEAA 468

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  +K A+G+D    T+Q+DF+LP+RF   YV    ++  PV+IHR V  ++ER
Sbjct: 469 FYGPKLDVQVKTALGKDETLSTVQLDFHLPNRFELAYVGEDGKEHRPVVIHRGVVSTMER 528

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           F+  +IE +KG  P WL+P+Q  V  ++   ++Y + + + LK   + +  D R+E + Y
Sbjct: 529 FVAFLIEEYKGAFPTWLAPVQVEVIPVSEVHMDYVRRVEDKLKQAGVRVHVDVRDEKLGY 588

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIRE  ++KIP I++ GDKE    ++ +R++G   ++ V L + +  + +E
Sbjct: 589 KIREAQMQKIPYILVLGDKEIEASTVNVRKYGQKDSEAVGLDEFVSSMKEE 639


>gi|29377326|ref|NP_816480.1| threonyl-tRNA synthetase [Enterococcus faecalis V583]
 gi|255971805|ref|ZP_05422391.1| threonyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|256854147|ref|ZP_05559512.1| threonyl-tRNA synthetase [Enterococcus faecalis T8]
 gi|73919789|sp|Q830D0|SYT_ENTFA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|29344793|gb|AAO82550.1| threonyl-tRNA synthetase [Enterococcus faecalis V583]
 gi|255962823|gb|EET95299.1| threonyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|256711090|gb|EEU26133.1| threonyl-tRNA synthetase [Enterococcus faecalis T8]
 gi|323481721|gb|ADX81160.1| threonyl-tRNA synthetase [Enterococcus faecalis 62]
          Length = 645

 Score =  516 bits (1330), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 261/635 (41%), Positives = 402/635 (63%), Gaps = 23/635 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDP-VREGSIEIIT 63
           I +TFPDG++K F    T  DVA+SIS SLAKKA+A   NG + DL  P V +GS+EI+T
Sbjct: 3   IHITFPDGAVKPFDSGITTFDVAKSISNSLAKKALAGKFNGVLIDLDRPIVEDGSLEIVT 62

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
           P+   +L ++RHS AH+MA A++ ++P ++  +GP I+ GFYYD D  E P ++++L  I
Sbjct: 63  PDHEDALGILRHSSAHLMANALRRLFPNIKFGVGPAIDSGFYYDTDNGESPVTAEDLPAI 122

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M +I+  ++P +++ +S  +A ELF    + YKVE++  +P  E +T+Y QG++ DL
Sbjct: 123 EAEMMKIVKENNPIVRKEISRAEALELFAD--DPYKVELITDLPEDEIITVYDQGDFVDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRG HV STG+++  FKL+ VAGAYWRG+S+  M+ RIYGTA+  +++L +++   EE++
Sbjct: 181 CRGVHVPSTGRIQ-VFKLLSVAGAYWRGNSDNHMMQRIYGTAFFDKKDLKEFIKMREEAK 239

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVL 300
           +RDHRKL +E+DLF ++++ GSG+ FW  KG  I +T+  Y+  ++I   Y+ + TP + 
Sbjct: 240 ERDHRKLGKELDLFMVSQEVGSGLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIMA 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D  L++ SGHWD Y  +MF        + D     L+PMNCP H+ V+ + + SYRELP+
Sbjct: 300 DVELYKTSGHWDHYHEDMFPPM----DMGDGEMLVLRPMNCPHHMMVYKNDIHSYRELPI 355

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  +   L++++Y DF  
Sbjct: 356 RIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVAVYADFNI 415

Query: 421 EKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
                +LS R     +K    DA+W+ A+ ++K  +D ++      ++     GE AFYG
Sbjct: 416 TDYRFRLSYRDPNNTDKYFDDDAMWEKAQAMLKAAMDELE------LDYFEAEGEAAFYG 469

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH-PVMIHRAVFGSIERFI 535
           PK +  +K A+G +    TIQ+DF LP RF+  YV    E  H PV+IHR +  ++ERF+
Sbjct: 470 PKLDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTMERFV 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
             + E +KG  P WL+PIQA +  ++  A  EYA EI   L++  L +E D RNE + YK
Sbjct: 530 AYLTEVYKGAFPTWLAPIQATIIPVSVEAHSEYAYEIKERLQAQGLRVEVDDRNEKMGYK 589

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           IR    +K+P  ++ GDKE  + ++ +RR+GS  T
Sbjct: 590 IRASQTQKVPYQLVVGDKEMEDATVNVRRYGSKET 624


>gi|27468275|ref|NP_764912.1| threonyl-tRNA synthetase 1 [Staphylococcus epidermidis ATCC 12228]
 gi|293366369|ref|ZP_06613048.1| threonine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|38258358|sp|Q8CS74|SYT_STAES RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|27315821|gb|AAO04956.1|AE016748_190 threonyl-tRNA synthetase 1 [Staphylococcus epidermidis ATCC 12228]
 gi|291319494|gb|EFE59861.1| threonine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|329733742|gb|EGG70068.1| threonine--tRNA ligase [Staphylococcus epidermidis VCU045]
 gi|329737259|gb|EGG73513.1| threonine--tRNA ligase [Staphylococcus epidermidis VCU028]
          Length = 645

 Score =  516 bits (1330), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 263/637 (41%), Positives = 407/637 (63%), Gaps = 23/637 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I + FPDG+ K F    T  D+A+SIS  L KKAVA   NG++ DL+ P+ ++G+IEIIT
Sbjct: 4   INIQFPDGNTKEFDKGTTTEDIAQSISPGLRKKAVAGKFNGQLVDLTRPLEQDGAIEIIT 63

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P    +L V+RHS AH+MA+A++ ++ +V+  +GP+IE GFYYDFD +   SSD+  +IE
Sbjct: 64  PGSEEALEVLRHSTAHLMAQALKRLYGDVKFGVGPVIEGGFYYDFDMDDKVSSDDFDKIE 123

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K M++I+  +   +++ +S EKA++ F  K + YK+E++++IP  E+VTLY QGE+ DLC
Sbjct: 124 KTMKQIVNENHKIVREVVSKEKAKDFF--KDDPYKLELIDAIPEDESVTLYTQGEFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RG HV ST ++K+F KL+  AGAYWRG+S+  ML RIYGTA+  +++L  +L  LEE  +
Sbjct: 182 RGVHVPSTSKIKEF-KLLSTAGAYWRGNSDNKMLQRIYGTAFFDKKDLKAHLKMLEERRE 240

Query: 244 RDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLD 301
           RDHRK+ ++++LF   +  G+G+  W   G  I + +  Y+  +++   Y+ + TP + +
Sbjct: 241 RDHRKIGKDLELFTNNQLVGAGLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLAN 300

Query: 302 QHLWQQSGHWDSYRANMF-AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
             L++ SGHWD Y+ +MF A+K  +D         L+PMNCP H+ ++ +   SYRELP+
Sbjct: 301 VDLYKTSGHWDHYQEDMFPAMKLDED-----EAMVLRPMNCPHHMMIYKNKPHSYRELPI 355

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G+++R E SG++ GL RVRG T +D+H+F   +Q+  E  ++ N+I  +YKDFGF
Sbjct: 356 RIAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVNMIQDVYKDFGF 415

Query: 421 EKIMVKLSTR-PE---KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           E    +LS R PE   K    D +W+ AE+++K   D +  + ++ I      GE AFYG
Sbjct: 416 EDYRFRLSYRDPEDKHKYFDDDEMWEKAESMLKEASDELGLTYEEAI------GEAAFYG 469

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK +  +K A+G++    T Q+DF LP RF+  Y+    E+  PV+IHR V  ++ERF+ 
Sbjct: 470 PKLDVQVKTAMGKEETLSTAQLDFLLPERFDLTYIGQDGEQHRPVVIHRGVVSTMERFVA 529

Query: 537 IMIENFKGNLPLWLSPIQA-IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            + E  KG  P WL+P+Q  I+        +YA+ + + LKS  + +E D RNE + YKI
Sbjct: 530 FLTEETKGAFPTWLAPMQVEIIPVNIDLHYDYARLLQDELKSQGVRVEIDDRNEKMGYKI 589

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
           RE  +KKIP  I+ GD+E   + + +R++GS   + V
Sbjct: 590 REAQMKKIPYQIVVGDQEVEHQEVNVRKYGSEKQESV 626


>gi|229496081|ref|ZP_04389803.1| threonyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406]
 gi|229316977|gb|EEN82888.1| threonyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406]
          Length = 672

 Score =  516 bits (1330), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 267/638 (41%), Positives = 396/638 (62%), Gaps = 19/638 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           IK+T PDGS +      T   +AE IS  LA+  +A  ++GK+ DLS P+ ++ +++++ 
Sbjct: 24  IKITLPDGSQRECQEGVTPYQIAEEISTRLAQDVLAAEVDGKIVDLSTPLMQDANVKLLK 83

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
            ED        H+ AH+MAEA+Q+++P  Q  IGP IE+GFYYD D  +      +LA+I
Sbjct: 84  WEDDGGKHAYWHTSAHLMAEAIQALYPHAQFGIGPAIENGFYYDIDTGDTILKESDLAKI 143

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E+KM E      P  +  +S ++A + F ++ + YKVE++  +     +T Y QG + DL
Sbjct: 144 EEKMLEFAKEKQPLTRCSISKQEALKRFANEGQTYKVELINDL-EDGTITTYSQGSFTDL 202

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ +TG +K   KL+ VAGAYWRGD  R  L+RIYG  +  ++ L +YL  LEE++
Sbjct: 203 CRGPHLPNTGYIKAV-KLLSVAGAYWRGDEKRKQLTRIYGITFPKKKMLDEYLAVLEEAK 261

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
           KRDHRK+ +E++LF  ++  G+G+  W  +G ++   L  ++++  KD  Y+++ TP + 
Sbjct: 262 KRDHRKIGKELELFAFSQTVGAGLPLWLPRGTRLRLRLEDFLKKIQKDFGYQQVMTPHIG 321

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  L++ SGH+  Y A+ F       T ++   F LKPMNCP H  ++     SYR+LPV
Sbjct: 322 NIELYKTSGHYAKYGADSFRPIT---TPQEGEEFMLKPMNCPHHCEIYRIKPHSYRDLPV 378

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLAEFG+VYR E SG LHGL RVRGFTQDDAH+FCT EQ+ +E LK+ ++I  I+K   F
Sbjct: 379 RLAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCTPEQVKDEFLKVMDIIFIIFKALKF 438

Query: 421 EKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           E    ++S R     EK +GSD  WD AE  +      I+   +  +   V  GE AFYG
Sbjct: 439 ENFEAQISLRDKNNREKYIGSDENWDRAEQAI------IEACQEKGLPAVVEYGEAAFYG 492

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK ++++KDAIGR WQ GTIQVD+NLP RF+  Y    ++K  PVMIHRA FGS+ERF+ 
Sbjct: 493 PKLDFMVKDAIGRRWQLGTIQVDYNLPERFDLEYTGEDNQKHRPVMIHRAPFGSMERFVA 552

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           ++IE+  G  PLWL+P Q +V  I  +  EYA ++ + L +H ++   D RNE I  KIR
Sbjct: 553 VLIEHTAGRFPLWLTPDQVVVLPIGENFNEYAYKVRDFLANHDITATVDDRNEKIGRKIR 612

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           ++ +K+IP ++I G +E+   ++ +R+ G      V L
Sbjct: 613 DNELKRIPYLLIVGAQESENETVSVRKQGEGDQGSVKL 650


>gi|315148859|gb|EFT92875.1| threonyl-tRNA synthetase [Enterococcus faecalis TX4244]
          Length = 660

 Score =  516 bits (1330), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 261/635 (41%), Positives = 402/635 (63%), Gaps = 23/635 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           I +TFPDG++K F    T  DVA+SIS SLAKKA+A   NG + DL  P+ E GS+EI+T
Sbjct: 18  IHITFPDGAVKPFDSGVTTFDVAKSISNSLAKKALAGKFNGVLIDLDRPIIEDGSLEIVT 77

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
           P+   +L ++RHS AH+MA A++ ++P ++  +GP I+ GFYYD D  E P ++++L  I
Sbjct: 78  PDHEDALGILRHSSAHLMANALRRLFPNIKFGVGPAIDSGFYYDTDNGESPVTAEDLPAI 137

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M +I+  ++P +++ +S  +A ELF    + YKVE++  +P  E +T+Y QG++ DL
Sbjct: 138 EAEMMKIVKENNPIVRKEISRAEALELFAD--DPYKVELITDLPEDEIITVYDQGDFVDL 195

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRG HV STG+++  FKL+ VAGAYWRG+S+  M+ RIYGTA+  +++L +++   EE++
Sbjct: 196 CRGVHVPSTGRIQ-VFKLLSVAGAYWRGNSDNHMMQRIYGTAFFDKKDLKEFIKMREEAK 254

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVL 300
           +RDHRKL +E+DLF ++++ GSG+ FW  KG  I +T+  Y+  ++I   Y+ + TP + 
Sbjct: 255 ERDHRKLGKELDLFMVSQEVGSGLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIMA 314

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D  L++ SGHWD Y  +MF        + D     L+PMNCP H+ V+ + + SYRELP+
Sbjct: 315 DVELYKTSGHWDHYHEDMFPPM----DMGDGEMLVLRPMNCPHHMMVYKNDIHSYRELPI 370

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  +   L++++Y DF  
Sbjct: 371 RIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVAVYADFNI 430

Query: 421 EKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
                +LS R     +K    DA+W+ A+ ++K  +D ++      ++     GE AFYG
Sbjct: 431 TDYRFRLSYRDPNNTDKYFDDDAMWEKAQAMLKAAMDELE------LDYFEAEGEAAFYG 484

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH-PVMIHRAVFGSIERFI 535
           PK +  +K A+G +    TIQ+DF LP RF+  YV    E  H PV+IHR +  ++ERF+
Sbjct: 485 PKLDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTMERFV 544

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
             + E +KG  P WL+PIQA +  ++  A  EYA EI   L++  L +E D RNE + YK
Sbjct: 545 AYLTEVYKGAFPTWLAPIQATIIPVSVEAHSEYAYEIKERLQAQGLRVEVDDRNEKMGYK 604

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           IR    +K+P  ++ GDKE  + ++ +RR+GS  T
Sbjct: 605 IRASQTQKVPYQLVVGDKEMEDATVNVRRYGSKET 639


>gi|315158985|gb|EFU03002.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0312]
          Length = 660

 Score =  516 bits (1330), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 261/635 (41%), Positives = 402/635 (63%), Gaps = 23/635 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDP-VREGSIEIIT 63
           I +TFPDG++K F    T  DVA+SIS SLAKKA+A   NG + DL  P V +GS+EI+T
Sbjct: 18  IHITFPDGAVKPFDSGITTFDVAKSISNSLAKKALAGKFNGVLIDLDRPIVEDGSLEIVT 77

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
           P+   +L ++RHS AH+MA A++ ++P ++  +GP I+ GFYYD D  E P ++++L  I
Sbjct: 78  PDHEDALGILRHSSAHLMANALRRLFPNIKFGVGPAIDSGFYYDTDNGESPVTAEDLPAI 137

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M +I+  ++P +++ +S  +A ELF    + YKVE++  +P  E +T+Y QG++ DL
Sbjct: 138 EAEMMKIVKENNPIVRKEISRAEALELFAD--DPYKVELITDLPEDEIITVYDQGDFVDL 195

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRG HV STG+++  FKL+ VAGAYWRG+S+  M+ RIYGTA+  +++L +++   EE++
Sbjct: 196 CRGVHVPSTGRIQ-VFKLLSVAGAYWRGNSDNHMMQRIYGTAFFDKKDLKEFIKMREEAK 254

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVL 300
           +RDHRKL +E+DLF ++++ GSG+ FW  KG  I +T+  Y+  ++I   Y+ + TP + 
Sbjct: 255 ERDHRKLGKELDLFMVSQEVGSGLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIMA 314

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D  L++ SGHWD Y  +MF        + D     L+PMNCP H+ V+ + + SYRELP+
Sbjct: 315 DVELYKTSGHWDHYHEDMFPPM----DMGDGEMLVLRPMNCPHHMMVYKNDIHSYRELPI 370

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  +   L++++Y DF  
Sbjct: 371 RIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVAVYADFNI 430

Query: 421 EKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
                +LS R     +K    DA+W+ A+ ++K  +D ++      ++     GE AFYG
Sbjct: 431 TDYRFRLSYRDPNNTDKYFDDDAMWEKAQAMLKAAMDELE------LDYFEAEGEAAFYG 484

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH-PVMIHRAVFGSIERFI 535
           PK +  +K A+G +    TIQ+DF LP RF+  YV    E  H PV+IHR +  ++ERF+
Sbjct: 485 PKLDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTMERFV 544

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
             + E +KG  P WL+PIQA +  ++  A  EYA EI   L++  L +E D RNE + YK
Sbjct: 545 AYLTEVYKGAFPTWLAPIQATIIPVSVEAHSEYAYEIKERLQAQGLRVEVDDRNEKMGYK 604

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           IR    +K+P  ++ GDKE  + ++ +RR+GS  T
Sbjct: 605 IRASQTQKVPYQLVVGDKEMEDATVNVRRYGSKET 639


>gi|224476774|ref|YP_002634380.1| threonyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus
           TM300]
 gi|254783537|sp|B9DNC9|SYT_STACT RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|222421381|emb|CAL28195.1| threonyl-tRNA synthetase 1 [Staphylococcus carnosus subsp. carnosus
           TM300]
          Length = 647

 Score =  516 bits (1330), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 263/636 (41%), Positives = 401/636 (63%), Gaps = 21/636 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           I +TFPDG+   F    T  ++A+SIS  L KKAVA   N K+ DL+ P+ E GSIEI+T
Sbjct: 4   INITFPDGNSTEFDKGITTEEIAQSISPGLRKKAVAGKFNDKMVDLTRPLEEDGSIEIVT 63

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P    +L V+RHS AH+MA+A++ ++ +V+  +GP+I+ GFYYDFD +   SSD+  +IE
Sbjct: 64  PGSDEALEVLRHSTAHLMAQALKRLYGDVKFGVGPVIDGGFYYDFDTDVKISSDDFPEIE 123

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K M++I+  +    ++ +S E+A+E F  K + YK+E++++IP  E+VTLY QGE+ DLC
Sbjct: 124 KTMKQIVNENYKIERKVVSREEAKEFF--KDDPYKLELIDAIPEDESVTLYSQGEFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RG HV ST ++K+F KL+  AGAYWRGDSN  ML RIYGTA+  +++L  +L  LEE ++
Sbjct: 182 RGVHVPSTSKIKEF-KLLSTAGAYWRGDSNNKMLQRIYGTAFFDKKDLKAHLKMLEERKE 240

Query: 244 RDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLD 301
           RDHRK+ +E+DLF  ++  G+G+  W   G  I + +  Y+  +++   Y+ + TP + +
Sbjct: 241 RDHRKIGKELDLFMNSQLVGAGLPLWLPNGATIRREIERYIVDKEVALGYDHVYTPVMAN 300

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             L++ SGHWD Y+ +MF     D+T        L+PMNCP H+ ++ +   SYRELP+R
Sbjct: 301 VELYKTSGHWDHYQDDMFPPMKLDET----EEMVLRPMNCPHHMMIYKNKPHSYRELPIR 356

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AE G+++R E SG++ GL RVRG T +D+H+F   +Q+  E  ++  LI+ +Y+DFGFE
Sbjct: 357 IAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVELILDVYEDFGFE 416

Query: 422 KIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
               +LS R     EK    D +W+ AE+++K  +D +    ++ I      GE AFYGP
Sbjct: 417 NYSFRLSYRDPEDKEKYFDDDEMWERAESMLKEAVDEMGLPYEEAI------GEAAFYGP 470

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  +K A+G++    T Q+DF LP RF+  Y+    E+  PV+IHR V  ++ERF+  
Sbjct: 471 KLDVQVKTAMGKEETLSTAQLDFLLPERFDLAYIGKDGEEHRPVVIHRGVVSTMERFVAF 530

Query: 538 MIENFKGNLPLWLSPIQA-IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           + E  KG  P WL+P Q  I+        +YA++I + LKS  + +E D RNE + YKIR
Sbjct: 531 LTEETKGAFPTWLAPKQVEIIPVNVDLHYDYARQIQDELKSQGVRVEIDDRNEKMGYKIR 590

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
           E  + KIP  ++ GDKE     + +R++GS   + V
Sbjct: 591 EAQMHKIPYQLVIGDKEIENNEVNVRKYGSKDQETV 626


>gi|227554282|ref|ZP_03984329.1| threonyl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|229544818|ref|ZP_04433543.1| threonyl-tRNA synthetase [Enterococcus faecalis TX1322]
 gi|307289786|ref|ZP_07569723.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0411]
 gi|227176572|gb|EEI57544.1| threonyl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|229310090|gb|EEN76077.1| threonyl-tRNA synthetase [Enterococcus faecalis TX1322]
 gi|306499171|gb|EFM68649.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0411]
 gi|315030800|gb|EFT42732.1| threonyl-tRNA synthetase [Enterococcus faecalis TX4000]
 gi|315575247|gb|EFU87438.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0309B]
 gi|315582393|gb|EFU94584.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0309A]
          Length = 660

 Score =  516 bits (1329), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 261/635 (41%), Positives = 402/635 (63%), Gaps = 23/635 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDP-VREGSIEIIT 63
           I +TFPDG++K F    T  DVA+SIS SLAKKA+A   NG + DL  P V +GS+EI+T
Sbjct: 18  IHITFPDGAVKPFDSGITTFDVAKSISNSLAKKALAGKFNGVLIDLDRPIVEDGSLEIVT 77

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
           P+   +L ++RHS AH+MA A++ ++P ++  +GP I+ GFYYD D  E P ++++L  I
Sbjct: 78  PDHEDALGILRHSSAHLMANALRRLFPNIKFGVGPAIDSGFYYDTDNGESPVTAEDLPAI 137

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M +I+  ++P +++ +S  +A ELF    + YKVE++  +P  E +T+Y QG++ DL
Sbjct: 138 EAEMMKIVKENNPIVRKEISRAEALELFAD--DPYKVELITDLPEDEIITVYDQGDFVDL 195

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRG HV STG+++  FKL+ VAGAYWRG+S+  M+ RIYGTA+  +++L +++   EE++
Sbjct: 196 CRGVHVPSTGRIQ-VFKLLSVAGAYWRGNSDNHMMQRIYGTAFFDKKDLKEFIKMREEAK 254

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVL 300
           +RDHRKL +E+DLF ++++ GSG+ FW  KG  I +T+  Y+  ++I   Y+ + TP + 
Sbjct: 255 ERDHRKLGKELDLFMVSQEVGSGLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIMA 314

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D  L++ SGHWD Y  +MF        + D     L+PMNCP H+ V+ + + SYRELP+
Sbjct: 315 DVELYKTSGHWDHYHEDMFPPM----DMGDGEMLVLRPMNCPHHMMVYKNDIHSYRELPI 370

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  +   L++++Y DF  
Sbjct: 371 RIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVAVYADFNI 430

Query: 421 EKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
                +LS R     +K    DA+W+ A+ ++K  +D ++      ++     GE AFYG
Sbjct: 431 TDYRFRLSYRDPNNTDKYFDDDAMWEKAQAMLKAAMDELE------LDYFEAEGEAAFYG 484

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH-PVMIHRAVFGSIERFI 535
           PK +  +K A+G +    TIQ+DF LP RF+  YV    E  H PV+IHR +  ++ERF+
Sbjct: 485 PKLDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTMERFV 544

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
             + E +KG  P WL+PIQA +  ++  A  EYA EI   L++  L +E D RNE + YK
Sbjct: 545 AYLTEVYKGAFPTWLAPIQATIIPVSVEAHSEYAYEIKERLQAQGLRVEVDDRNEKMGYK 604

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           IR    +K+P  ++ GDKE  + ++ +RR+GS  T
Sbjct: 605 IRASQTQKVPYQLVVGDKEMEDATVNVRRYGSKET 639


>gi|312951108|ref|ZP_07770013.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|310630884|gb|EFQ14167.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|315154152|gb|EFT98168.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0031]
          Length = 660

 Score =  516 bits (1329), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 261/635 (41%), Positives = 402/635 (63%), Gaps = 23/635 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDP-VREGSIEIIT 63
           I +TFPDG++K F    T  DVA+SIS SLAKKA+A   NG + DL  P V +GS+EI+T
Sbjct: 18  IHITFPDGAVKLFDSGITTFDVAKSISNSLAKKALAGKFNGVLIDLDRPIVEDGSLEIVT 77

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
           P+   +L ++RHS AH+MA A++ ++P ++  +GP I+ GFYYD D  E P ++++L  I
Sbjct: 78  PDHEDALGILRHSSAHLMANALRRLFPNIKFGVGPAIDSGFYYDTDNGESPVTAEDLPAI 137

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M +I+  ++P +++ +S  +A ELF    + YKVE++  +P  E +T+Y QG++ DL
Sbjct: 138 EAEMMKIVKENNPIVRKEISRAEALELFAD--DPYKVELITDLPEDEIITVYDQGDFVDL 195

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRG HV STG+++  FKL+ VAGAYWRG+S+  M+ RIYGTA+  +++L +++   EE++
Sbjct: 196 CRGVHVPSTGRIQ-VFKLLSVAGAYWRGNSDNHMMQRIYGTAFFDKKDLKEFIKMREEAK 254

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVL 300
           +RDHRKL +E+DLF ++++ GSG+ FW  KG  I +T+  Y+  ++I   Y+ + TP + 
Sbjct: 255 ERDHRKLGKELDLFMVSQEVGSGLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIMA 314

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D  L++ SGHWD Y  +MF        + D     L+PMNCP H+ V+ + + SYRELP+
Sbjct: 315 DVELYKTSGHWDHYHEDMFPPM----DMGDGEMLVLRPMNCPHHMMVYKNDIHSYRELPI 370

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  +   L++++Y DF  
Sbjct: 371 RIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVAVYADFNI 430

Query: 421 EKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
                +LS R     +K    DA+W+ A+ ++K  +D ++      ++     GE AFYG
Sbjct: 431 TDYRFRLSYRDPNNTDKYFDDDAMWEKAQAMLKAAMDELE------LDYFEAEGEAAFYG 484

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH-PVMIHRAVFGSIERFI 535
           PK +  +K A+G +    TIQ+DF LP RF+  YV    E  H PV+IHR +  ++ERF+
Sbjct: 485 PKLDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTMERFV 544

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
             + E +KG  P WL+PIQA +  ++  A  EYA EI   L++  L +E D RNE + YK
Sbjct: 545 AYLTEVYKGAFPTWLAPIQATIIPVSVEAHSEYAYEIKERLQAQGLRVEVDDRNEKMGYK 604

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           IR    +K+P  ++ GDKE  + ++ +RR+GS  T
Sbjct: 605 IRASQTQKVPYQLVVGDKEMEDATVNVRRYGSKET 639


>gi|256963904|ref|ZP_05568075.1| threonyl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|256954400|gb|EEU71032.1| threonyl-tRNA synthetase [Enterococcus faecalis HIP11704]
          Length = 645

 Score =  516 bits (1329), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 260/635 (40%), Positives = 402/635 (63%), Gaps = 23/635 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDP-VREGSIEIIT 63
           I +TFPDG++K F    T  DVA+SIS SLAKKA+A   NG + DL  P V +GS+EI+T
Sbjct: 3   IHITFPDGAVKPFDSGVTTFDVAKSISNSLAKKALAGKFNGVLIDLDRPIVEDGSLEIVT 62

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
           P+   +L ++RHS AH+MA A++ ++P ++  +GP I+ GFYYD D  E P ++++L  I
Sbjct: 63  PDHEDALGILRHSSAHLMANALRRLFPNIKFGVGPAIDSGFYYDTDNGESPVTAEDLPAI 122

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M +I+  ++P +++ +S  +A E+F    + YKVE++  +P  E +T+Y QG++ DL
Sbjct: 123 EAEMMKIVKENNPIVRKEISRAEALEVFAD--DPYKVELITDLPEDEIITIYDQGDFVDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRG HV STG+++  FKL+ VAGAYWRG+S+  M+ RIYGTA+  +++L +++   EE++
Sbjct: 181 CRGVHVPSTGRIQ-VFKLLSVAGAYWRGNSDNHMMQRIYGTAFFDKKDLKEFIKMREEAK 239

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVL 300
           +RDHRKL +E+DLF ++++ GSG+ FW  KG  I +T+  Y+  ++I   Y+ + TP + 
Sbjct: 240 ERDHRKLGKELDLFMVSQEVGSGLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIMA 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D  L++ SGHWD Y  +MF        + D     L+PMNCP H+ V+ + + SYRELP+
Sbjct: 300 DVELYKTSGHWDHYHEDMFPPM----DMGDGEMLVLRPMNCPHHMMVYKNDIHSYRELPI 355

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  +   L++++Y DF  
Sbjct: 356 RIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVAVYADFNI 415

Query: 421 EKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
                +LS R     +K    DA+W+ A+ ++K  +D ++      ++     GE AFYG
Sbjct: 416 TDYRFRLSYRDPNNTDKYFDDDAMWEKAQAMLKAAMDELE------LDYFEAEGEAAFYG 469

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH-PVMIHRAVFGSIERFI 535
           PK +  +K A+G +    TIQ+DF LP RF+  YV    E  H PV+IHR +  ++ERF+
Sbjct: 470 PKLDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTMERFV 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
             + E +KG  P WL+PIQA +  ++  A  EYA EI   L++  L +E D RNE + YK
Sbjct: 530 AYLTEVYKGAFPTWLAPIQATIIPVSVEAHSEYAYEIKERLQAQGLRVEVDDRNEKMGYK 589

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           IR    +K+P  ++ GDKE  + ++ +RR+GS  T
Sbjct: 590 IRASQTQKVPYQLVVGDKEMEDATVNVRRYGSKET 624


>gi|220903768|ref|YP_002479080.1| threonyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|254783519|sp|B8J4E4|SYT_DESDA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|219868067|gb|ACL48402.1| threonyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 647

 Score =  516 bits (1328), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 268/612 (43%), Positives = 374/612 (61%), Gaps = 26/612 (4%)

Query: 22  TGSDVAESISRSLAKKAVAVAINGK-------VCDLSDPVREG--SIEIITPEDPRSLAV 72
            G  VA  + ++L+ K     +  +       + DLS PV  G   IE +  + P  L +
Sbjct: 14  AGDSVAAILQKALSGKKFKAVVAARALDSAEELLDLSSPVPAGCTGIEPVYADSPEGLQI 73

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIAR 132
           +RHS AH+MA AV+ ++P+ +V IGP IE GFYYDFD E+PFSS++ + IE +MQ I   
Sbjct: 74  LRHSTAHVMAAAVKQLFPKTRVTIGPSIESGFYYDFDVEKPFSSEDFSAIEAEMQRIANA 133

Query: 133 DSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTG 192
             PF ++ LS  +A E F++  E YKVEI+E I A + V++Y    + DLCRGPHV  TG
Sbjct: 134 REPFTREVLSRAEAIERFKAMGEDYKVEIIEGIDA-DTVSVYTCSGFADLCRGPHVPHTG 192

Query: 193 QVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLARE 252
              K  KLM VAGAYWRGD    MLSRIYGTA+  ++ L  YL  +EE+++RDHRKL RE
Sbjct: 193 -FAKASKLMSVAGAYWRGDEKNRMLSRIYGTAFADEKALAAYLKQMEEAKRRDHRKLGRE 251

Query: 253 MDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGH 310
           + LF   ED   G++FW  KG  +   L  + R++ +K  Y+ +  PQ+L    WQ+SGH
Sbjct: 252 LSLFTFKEDVAPGMVFWLPKGMLVRTILEDFWRKEHLKRGYDIVQGPQLLRVETWQKSGH 311

Query: 311 WDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYR 370
           +D YR NM+  +  +D       + +KPMNC  H+ ++ + L SYR+LP R  E G V+R
Sbjct: 312 YDHYRENMYFTQIEEDA------YGVKPMNCISHMLIYGNELHSYRDLPQRYFELGVVHR 365

Query: 371 NEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR 430
           +E SG LHGL+RVR FTQDDAH+ C  EQ+  E L++ +LI  +   FGFE   V +STR
Sbjct: 366 HEKSGVLHGLLRVRQFTQDDAHIICAPEQLEGEILEVIHLIRDLMNLFGFE-YKVAVSTR 424

Query: 431 PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRD 490
           PE  +G+D  W+ A + +   ++  K      IN G    +GAFYGPK +  L D IGR+
Sbjct: 425 PESSIGTDEAWEMATSALVQAVE--KAGLPYTINEG----DGAFYGPKIDVRLLDCIGRE 478

Query: 491 WQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL 550
           WQC TIQVDF LP RF+  YV    E+  PVM+HRA+ GS+ERFIGI++ENF G LP WL
Sbjct: 479 WQCSTIQVDFTLPERFDLTYVGQDGERHRPVMVHRAIMGSLERFIGILVENFAGALPTWL 538

Query: 551 SPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           +P QA + T+T +  E    +    K+  +  + D RNE + +K+RE  + K+P I++ G
Sbjct: 539 APEQARLLTVTEAGDEAVSSMLEEFKALGIRAQADTRNEKLGFKVREAQLAKVPYILVVG 598

Query: 611 DKEASERSIGIR 622
           +KE       +R
Sbjct: 599 EKEVQAGGANVR 610


>gi|329724705|gb|EGG61211.1| threonine--tRNA ligase [Staphylococcus epidermidis VCU144]
          Length = 645

 Score =  516 bits (1328), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 262/637 (41%), Positives = 407/637 (63%), Gaps = 23/637 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I + FPDG+ K F    T  D+A+SIS  L KKAVA   NG++ DL+ P+ ++G+IEIIT
Sbjct: 4   INIQFPDGNTKEFDKGTTTEDIAQSISPGLRKKAVAGKFNGQLVDLTRPLEQDGAIEIIT 63

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P    +L V+RHS AH+MA+A++ ++ +V+  +GP+IE GFYYDFD +   SSD+  +IE
Sbjct: 64  PGSEEALEVLRHSTAHLMAQALKRLYGDVKFGVGPVIEGGFYYDFDMDDKVSSDDFDKIE 123

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K M++I+  +   +++ +S EKA++ F  K + YK+E++++IP  E+VTLY QGE+ DLC
Sbjct: 124 KTMKQIVNENHKIVREVVSKEKAKDFF--KDDPYKLELIDAIPEDESVTLYTQGEFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RG HV ST ++K+F KL+  AGAYWRG+S+  ML RIYGTA+  +++L  +L  LEE  +
Sbjct: 182 RGVHVPSTSKIKEF-KLLSTAGAYWRGNSDNKMLQRIYGTAFFDKKDLKAHLKMLEERRE 240

Query: 244 RDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLD 301
           RDHRK+ ++++LF   +  G+G+  W   G  I + +  Y+  +++   Y+ + TP + +
Sbjct: 241 RDHRKIGKDLELFTNNQLVGAGLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLAN 300

Query: 302 QHLWQQSGHWDSYRANMF-AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
             L++ SGHWD Y+ +MF A+K  +D         L+PMNCP H+ ++ +   SYRELP+
Sbjct: 301 VDLYKTSGHWDHYQEDMFPAMKLDED-----EAMVLRPMNCPHHMMIYKNKPHSYRELPI 355

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G+++R E SG++ GL RVRG T +D+H+F   +Q+  E  ++ N+I  +YKDFGF
Sbjct: 356 RIAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVNMIQDVYKDFGF 415

Query: 421 EKIMVKLSTR-PE---KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           +    +LS R PE   K    D +W+ AE+++K   D +  + ++ I      GE AFYG
Sbjct: 416 KDYRFRLSYRDPEDKHKYFDDDEMWEKAESMLKEASDELGLTYEEAI------GEAAFYG 469

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK +  +K A+G++    T Q+DF LP RF+  Y+    E+  PV+IHR V  ++ERF+ 
Sbjct: 470 PKLDVQVKTAMGKEETLSTAQLDFLLPERFDLTYIGQDGEQHRPVVIHRGVVSTMERFVA 529

Query: 537 IMIENFKGNLPLWLSPIQA-IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            + E  KG  P WL+P+Q  I+        +YA+ + + LKS  + +E D RNE + YKI
Sbjct: 530 FLTEETKGAFPTWLAPMQVEIIPVNVDLHYDYARLLQDELKSQGVRVEIDDRNEKMGYKI 589

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
           RE  +KKIP  I+ GD+E   + + +R++GS   + V
Sbjct: 590 REAQMKKIPYQIVVGDQEVENQEVNVRKYGSEKQESV 626


>gi|258647088|ref|ZP_05734557.1| threonine--tRNA ligase [Prevotella tannerae ATCC 51259]
 gi|260853035|gb|EEX72904.1| threonine--tRNA ligase [Prevotella tannerae ATCC 51259]
          Length = 647

 Score =  516 bits (1328), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 261/651 (40%), Positives = 404/651 (62%), Gaps = 24/651 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           IK+TFPDGS++ F    TG  +AE +S  LA++ +A ++NG + +L+ P+ E  +++++ 
Sbjct: 2   IKVTFPDGSVREFEDGITGLQIAERLSAQLAREVLACSVNGNIVELNRPLTEDCTLKLLK 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE--LAQ 121
            +D        H+ AH+MAEA+Q +WP  Q  IGP IE GFYYD    +  +  E   A+
Sbjct: 62  WDDEEGKHAFWHTSAHLMAEAMQELWPGTQFGIGPAIEKGFYYDVMPPEGVTITEADFAK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE KM E++ +  P +++ +S   A   FE   + YK E++  + A   +T Y QG + D
Sbjct: 122 IENKMHELVQKKEPLVRKSISKTDALNFFEQHGQHYKNELIADL-ADGTITTYTQGNYTD 180

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ +T  +K   K+M V+ AYWRGD  RP ++R+YG ++  ++ L +YL  LEE+
Sbjct: 181 LCRGPHLLNTAPIKAI-KVMAVSSAYWRGDEKRPQMTRVYGVSFPKKKMLDEYLQLLEEA 239

Query: 242 EKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQV 299
           ++RDHRK+ REM+LF  +E  G G+  W  KG  + Q L+S++R+  K   Y E+ TP +
Sbjct: 240 KRRDHRKIGREMELFMFSELVGKGLPIWLPKGTVLRQQLMSFLRKIQKRFGYMEVITPHI 299

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             ++L+  SGH+  Y  + F    A  T ++   + LKPMNCP H AV++    SY++LP
Sbjct: 300 GSKNLYVTSGHYAKYGKDSFQ---AIHTPEEGEEYMLKPMNCPHHCAVYSWQPHSYKDLP 356

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AEFG+VYR E SG LHGL RVRGFTQDDAH+FC  +Q+  E L++ ++I+ +++   
Sbjct: 357 LRIAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCRPDQVKQEFLRVMDIIMIVFRALN 416

Query: 420 FEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           FE+   ++S R     EK +GSD +WD AE  +      I+   +  +   +  GE AFY
Sbjct: 417 FEQFEAQISLRDKVKREKYIGSDDVWDKAEQAI------IEACEEKGLQAKIEYGEAAFY 470

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDA+GR WQ GTIQVD+NLP RF   Y    S+K  PVMIHRA FGS+ERF 
Sbjct: 471 GPKLDFMVKDALGRRWQLGTIQVDYNLPERFQLEYTGEDSKKHRPVMIHRAPFGSLERFT 530

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE+  G+ PLWL P Q ++  I+    +YA ++   L++  +    D RNE +  KI
Sbjct: 531 AVLIEHTGGHFPLWLMPDQCVILPISERFNDYAHKVKEQLEAAGIRANIDERNEKVGRKI 590

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           R++ +K IP +++ G+KE ++ S+ +R+ G  T + ++    IP+  ++ L
Sbjct: 591 RDNEMKHIPYLLVVGEKEQADGSVNVRKQGEGTQETMT----IPMFAEKVL 637


>gi|159028099|emb|CAO87176.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 618

 Score =  516 bits (1328), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 266/617 (43%), Positives = 370/617 (59%), Gaps = 44/617 (7%)

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +  +D + L  IRH+CAHI+A AVQ+++PE +VAIGP  E GFYYDFD++ PF+ ++L +
Sbjct: 14  VIEDDSQKLLKIRHTCAHILAMAVQTLFPETKVAIGPWTETGFYYDFDRQTPFTPEDLEK 73

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE--- 178
           I  +M  II ++ P +++ L   +     E   + YK  ILE IP  E +T Y  G    
Sbjct: 74  IAAEMGRIIGKNLPIIREVLERSEITAEIERLNQPYKKLILERIPPDETITRYFIGSPDA 133

Query: 179 --------------------WFDLCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPML 217
                               W+DLC GPH+ STG++    F L  VAGAYW+GD  +P L
Sbjct: 134 GRSDREPSLIDGAVSPPEEFWWDLCAGPHLNSTGEINPNAFVLESVAGAYWQGDEKQPQL 193

Query: 218 SRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIF 276
            RIYGTAW T  EL  YL   EE+++RDHRKL +++ LF I ED G G++FWH +G  + 
Sbjct: 194 QRIYGTAWQTPAELQNYLQQKEEAQRRDHRKLGQKLKLFSIQEDAGGGLVFWHPRGATMR 253

Query: 277 QTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMF-AVKCADDTIKDLRTF 334
             +  Y R+  ++  Y+ + TP + +  LW+ SGHWD YR NMF A++       + +++
Sbjct: 254 YLIEDYWRQAHLEAGYQFLYTPHLANLDLWKTSGHWDFYRDNMFEAIEL------EQQSY 307

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
            +KPMNCP HV  + + L SYRE P+R AE G+VYR E SG LHGLMRVRGFTQDDAH+F
Sbjct: 308 QIKPMNCPFHVLTYQNDLHSYREFPLRWAELGTVYRYERSGVLHGLMRVRGFTQDDAHIF 367

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDT 454
           C  EQ+  E L + NL   I  DFGF    + LSTRP K VGSD++W+ A      +++ 
Sbjct: 368 CLPEQIAAEILGVLNLTEKILSDFGFTNYQINLSTRPSKSVGSDSVWELA---TAALIEA 424

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH 514
           +     D I      G GAFYGPK +  ++DAIGR WQC TIQVDFNLP RF+  YV   
Sbjct: 425 LNAKKWDYIEDQ---GGGAFYGPKIDIKIQDAIGRMWQCSTIQVDFNLPERFDMQYVARD 481

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANL 574
             +  P+MIHRA+FGS+ERF GI+IEN+ G+ PLWL+PIQ  +  ++     YA E+A  
Sbjct: 482 GSRERPIMIHRAIFGSLERFFGILIENYAGDFPLWLAPIQVRLLPVSDEQQHYALEVAVQ 541

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           LK     +E D   E +  +IR   ++KIP++ + G +E S +++ IR         ++L
Sbjct: 542 LKQAGYRVEIDKSGERLGKQIRTGELEKIPVLAVIGKREVSSKTLSIRTRQGGDLGSMTL 601

Query: 635 LDAI-----PILTKESL 646
            D +      IL+K +L
Sbjct: 602 ADLLEKMQTAILSKTNL 618


>gi|73662391|ref|YP_301172.1| threonyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|123761534|sp|Q49YB4|SYT_STAS1 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|72494906|dbj|BAE18227.1| threonyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 645

 Score =  515 bits (1327), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 262/630 (41%), Positives = 394/630 (62%), Gaps = 21/630 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           IK+ FPDG+ K F    T  D+A+SIS  L KKAVA  +NG++ DL+ P+  +G IEI+T
Sbjct: 4   IKIKFPDGNTKEFDKGTTTEDIAQSISPGLRKKAVAGKLNGQLIDLTRPIESDGDIEIVT 63

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P    +L V+RHS AH+MA+A++ ++ EV   +GP+IE GFYYDFD E+  SSD+  +IE
Sbjct: 64  PGSDEALEVLRHSTAHLMAQALKRLYGEVHFGVGPVIEGGFYYDFDMEESISSDDFEKIE 123

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K M++I   + P  ++ +S  +A+  F    + YK E++++IP  ENVTLY QGE+ DLC
Sbjct: 124 KTMKQIANENYPIERKVVSRNEAKAFFSD--DPYKQELIDAIPEDENVTLYTQGEFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RG HV ST ++K+F KL+  AGAYWRGDSN  ML RIYGTA+  +++L  +L  LEE ++
Sbjct: 182 RGVHVPSTSKIKEF-KLLSTAGAYWRGDSNNKMLQRIYGTAFFDKKDLKAHLQMLEERKE 240

Query: 244 RDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLD 301
           RDHRK+ +E++LF +    G+G+  W   G  I + +  Y+  +++   Y+ + TP + +
Sbjct: 241 RDHRKIGKELELFSNNPLVGAGLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVMAN 300

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             L++ SGHWD Y+ +MF     D+         L+PMNCP H+ ++ +   SYRELP+R
Sbjct: 301 VDLYKTSGHWDHYQEDMFPTMKLDE----YEEMVLRPMNCPHHMMIYANKPHSYRELPIR 356

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AE G+++R E SG++ GL RVRG T +DAH+F   +Q+  E  ++ NLII +Y DF FE
Sbjct: 357 IAELGTMHRYEASGAVSGLQRVRGMTLNDAHIFVRPDQIKEEFKRVVNLIIDVYNDFNFE 416

Query: 422 KIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
               +LS R     EK    D +W  AE+++K  +D +    ++ I      GE AFYGP
Sbjct: 417 NYSFRLSYRDPEDKEKYFDDDEMWIKAESMLKEAVDELGLDYEEAI------GEAAFYGP 470

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  ++ A+G++    T Q+DF LP +F   Y+ +  E+  PV+IHR V  ++ERF+  
Sbjct: 471 KLDVQVQTAMGKEETLSTAQLDFLLPQKFELTYIGNDGEQHRPVVIHRGVVSTMERFVAF 530

Query: 538 MIENFKGNLPLWLSPIQA-IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           + E  KG  P WL+P Q  I+        +YA+ I + LKS  + +E D RNE + YKIR
Sbjct: 531 LTEETKGAFPTWLAPKQVEIIPVNVDLHYDYARLIQDELKSQGVRVEIDDRNEKMGYKIR 590

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGS 626
           E  ++KIP  ++ GDKE   + + +R++GS
Sbjct: 591 EAQMQKIPYQLVVGDKEVENKEVNVRKYGS 620


>gi|307272094|ref|ZP_07553357.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0855]
 gi|306511210|gb|EFM80217.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0855]
          Length = 660

 Score =  515 bits (1327), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 260/635 (40%), Positives = 402/635 (63%), Gaps = 23/635 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDP-VREGSIEIIT 63
           I +TFPDG++K F    T  DVA+SIS SLAKKA+A   NG + DL  P V +GS+EI+T
Sbjct: 18  IHITFPDGAVKPFDSGVTTFDVAKSISNSLAKKALAGKFNGVLIDLDRPIVEDGSLEIVT 77

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
           P+   +L ++RHS AH+MA A++ ++P ++  +GP I+ GFYYD D  E P ++++L  I
Sbjct: 78  PDHEDALGILRHSSAHLMANALRRLFPNIKFGVGPAIDSGFYYDTDNGESPVTAEDLPAI 137

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M +I+  ++P +++ +S  +A E+F    + YKVE++  +P  E +T+Y QG++ DL
Sbjct: 138 EAEMMKIVKENNPIVRKEISRAEALEVFAD--DPYKVELITDLPEDEIITIYDQGDFVDL 195

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRG HV STG+++  FKL+ VAGAYWRG+S+  M+ RIYGTA+  +++L +++   EE++
Sbjct: 196 CRGVHVPSTGRIQ-VFKLLSVAGAYWRGNSDNHMMQRIYGTAFFDKKDLKEFIKMREEAK 254

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVL 300
           +RDHRKL +E+DLF ++++ GSG+ FW  KG  I +T+  Y+  ++I   Y+ + TP + 
Sbjct: 255 ERDHRKLGKELDLFMVSQEVGSGLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIMA 314

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D  L++ SGHWD Y  +MF        + D     L+PMNCP H+ V+ + + SYRELP+
Sbjct: 315 DVELYKTSGHWDHYHEDMFPPM----DMGDGEMLVLRPMNCPHHMMVYKNDIHSYRELPI 370

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  +   L++++Y DF  
Sbjct: 371 RIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVAVYADFNI 430

Query: 421 EKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
                +LS R     +K    DA+W+ A+ ++K  +D ++      ++     GE AFYG
Sbjct: 431 TDYRFRLSYRDPNNTDKYFDDDAMWEKAQAMLKAAMDELE------LDYFEAEGEAAFYG 484

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH-PVMIHRAVFGSIERFI 535
           PK +  +K A+G +    TIQ+DF LP RF+  YV    E  H PV+IHR +  ++ERF+
Sbjct: 485 PKLDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTMERFV 544

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
             + E +KG  P WL+PIQA +  ++  A  EYA EI   L++  L +E D RNE + YK
Sbjct: 545 AYLTEVYKGAFPTWLAPIQATIIPVSVEAHSEYAYEIKERLQAQGLRVEVDDRNEKMGYK 604

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           IR    +K+P  ++ GDKE  + ++ +RR+GS  T
Sbjct: 605 IRASQTQKVPYQLVVGDKEMEDATVNVRRYGSKET 639


>gi|256960954|ref|ZP_05565125.1| threonyl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|256951450|gb|EEU68082.1| threonyl-tRNA synthetase [Enterococcus faecalis Merz96]
          Length = 645

 Score =  515 bits (1327), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 260/635 (40%), Positives = 401/635 (63%), Gaps = 23/635 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDP-VREGSIEIIT 63
           I +TFPDG++K F    T  DVA+SIS SLAKKA+A   NG + DL  P V +GS+EI+T
Sbjct: 3   IHITFPDGAVKPFDSGVTTFDVAKSISNSLAKKALAGKFNGVLIDLDRPIVEDGSLEIVT 62

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
           P+   +L ++RHS AH+MA A++ ++P ++  +GP I+ GFYYD D  E P ++++   I
Sbjct: 63  PDHEDALGILRHSSAHLMANALRRLFPNIKFGVGPAIDSGFYYDTDNGESPVTAEDFPAI 122

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M +I+  ++P +++ +S  +A ELF    + YKVE++  +P  E +T+Y QG++ DL
Sbjct: 123 EAEMMKIVKENNPIVRKEISRAEALELFAD--DPYKVELITDLPEDEIITIYDQGDFVDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRG HV STG+++  FKL+ VAGAYWRG+S+  M+ RIYGTA+  +++L +++   EE++
Sbjct: 181 CRGVHVPSTGRIQ-VFKLLSVAGAYWRGNSDNHMMQRIYGTAFFDKKDLKEFIKMREEAK 239

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVL 300
           +RDHRKL +E+DLF ++++ GSG+ FW  KG  I +T+  Y+  ++I   Y+ + TP + 
Sbjct: 240 ERDHRKLGKELDLFMVSQEVGSGLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIMA 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D  L++ SGHWD Y  +MF        + D     L+PMNCP H+ V+ + + SYRELP+
Sbjct: 300 DVELYKTSGHWDHYHEDMFPPM----DMGDGEMLVLRPMNCPHHMMVYKNDIHSYRELPI 355

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  +   L++++Y DF  
Sbjct: 356 RIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVAVYADFNI 415

Query: 421 EKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
                +LS R     +K    DA+W+ A+ ++K  +D ++      ++     GE AFYG
Sbjct: 416 TDYRFRLSYRDPNNTDKYFDDDAMWEKAQAMLKAAMDELE------LDYFEAEGEAAFYG 469

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH-PVMIHRAVFGSIERFI 535
           PK +  +K A+G +    TIQ+DF LP RF+  YV    E  H PV+IHR +  ++ERF+
Sbjct: 470 PKLDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTMERFV 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
             + E +KG  P WL+PIQA +  ++  A  EYA EI   L++  L +E D RNE + YK
Sbjct: 530 AYLTEVYKGAFPTWLAPIQATIIPVSVEAHSEYAYEIKERLQAQGLRVEVDDRNEKMGYK 589

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           IR    +K+P  ++ GDKE  + ++ +RR+GS  T
Sbjct: 590 IRASQTQKVPYQLVVGDKEMEDATVNVRRYGSKET 624


>gi|293382457|ref|ZP_06628392.1| threonine--tRNA ligase [Enterococcus faecalis R712]
 gi|293387159|ref|ZP_06631720.1| threonine--tRNA ligase [Enterococcus faecalis S613]
 gi|312906512|ref|ZP_07765514.1| threonyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
 gi|312910456|ref|ZP_07769302.1| threonyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
 gi|291080141|gb|EFE17505.1| threonine--tRNA ligase [Enterococcus faecalis R712]
 gi|291083430|gb|EFE20393.1| threonine--tRNA ligase [Enterococcus faecalis S613]
 gi|310627455|gb|EFQ10738.1| threonyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
 gi|311289228|gb|EFQ67784.1| threonyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
          Length = 660

 Score =  515 bits (1327), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 260/635 (40%), Positives = 401/635 (63%), Gaps = 23/635 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDP-VREGSIEIIT 63
           I +TFPDG++K F    T  DVA+SIS SLAKKA+A   NG + DL  P V +GS+EI+T
Sbjct: 18  IHITFPDGAVKPFDSGVTTFDVAKSISNSLAKKALAGKFNGVLIDLDRPIVEDGSLEIVT 77

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
           P+   +L ++RHS AH+MA A++ ++P ++  +GP I+ GFYYD D  E P ++++   I
Sbjct: 78  PDHEDALGILRHSSAHLMANALRRLFPNIKFGVGPAIDSGFYYDTDNGESPVTAEDFPAI 137

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M +I+  ++P +++ +S  +A ELF    + YKVE++  +P  E +T+Y QG++ DL
Sbjct: 138 EAEMMKIVKENNPIVRKEISRAEALELFAD--DPYKVELITDLPEDEIITIYDQGDFVDL 195

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRG HV STG+++  FKL+ VAGAYWRG+S+  M+ RIYGTA+  +++L +++   EE++
Sbjct: 196 CRGVHVPSTGRIQ-VFKLLSVAGAYWRGNSDNHMMQRIYGTAFFDKKDLKEFIKMREEAK 254

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVL 300
           +RDHRKL +E+DLF ++++ GSG+ FW  KG  I +T+  Y+  ++I   Y+ + TP + 
Sbjct: 255 ERDHRKLGKELDLFMVSQEVGSGLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIMA 314

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D  L++ SGHWD Y  +MF        + D     L+PMNCP H+ V+ + + SYRELP+
Sbjct: 315 DVELYKTSGHWDHYHEDMFPPM----DMGDGEMLVLRPMNCPHHMMVYKNDIHSYRELPI 370

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  +   L++++Y DF  
Sbjct: 371 RIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVAVYADFNI 430

Query: 421 EKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
                +LS R     +K    DA+W+ A+ ++K  +D ++      ++     GE AFYG
Sbjct: 431 TDYRFRLSYRDPNNTDKYFDDDAMWEKAQAMLKAAMDELE------LDYFEAEGEAAFYG 484

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH-PVMIHRAVFGSIERFI 535
           PK +  +K A+G +    TIQ+DF LP RF+  YV    E  H PV+IHR +  ++ERF+
Sbjct: 485 PKLDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTMERFV 544

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
             + E +KG  P WL+PIQA +  ++  A  EYA EI   L++  L +E D RNE + YK
Sbjct: 545 AYLTEVYKGAFPTWLAPIQATIIPVSVEAHSEYAYEIKERLQAQGLRVEVDDRNEKMGYK 604

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           IR    +K+P  ++ GDKE  + ++ +RR+GS  T
Sbjct: 605 IRASQTQKVPYQLVVGDKEMEDATVNVRRYGSKET 639


>gi|166365900|ref|YP_001658173.1| threonyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
 gi|166088273|dbj|BAG02981.1| threonyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
          Length = 618

 Score =  515 bits (1326), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 264/617 (42%), Positives = 369/617 (59%), Gaps = 44/617 (7%)

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +  ED + +  IRH+CAHI+A AVQ+++PE +VAIGP  E GFYYDFD+  PF+ ++L +
Sbjct: 14  VIEEDSQKIVKIRHTCAHILAMAVQTLFPETKVAIGPWTETGFYYDFDRPTPFTPEDLEK 73

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE--- 178
           I  +M  II ++ P +++ L   +     E   + YK  ILE IP  E +T Y  G    
Sbjct: 74  IAAEMGRIIGKNLPIIREVLERSEITAEIERLNQPYKRSILERIPPDETITRYFIGSPDA 133

Query: 179 --------------------WFDLCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPML 217
                               W+DLC GPH+ STG++    F L  VAGAYW+GD  +P L
Sbjct: 134 GRSDREPSLIDGAVSPPEEFWWDLCAGPHLNSTGEINPDAFALESVAGAYWQGDEKQPQL 193

Query: 218 SRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIF 276
            RIYGTAW T  EL  YL   EE+++RDHRKL +++ LF I ED G G++FWH +G  + 
Sbjct: 194 QRIYGTAWQTPAELQNYLQQKEEAQRRDHRKLGQQLKLFSIQEDAGGGLVFWHPRGATMR 253

Query: 277 QTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMF-AVKCADDTIKDLRTF 334
             +  Y R+  ++  Y+ + TP + +  LW+ SGHWD YR NMF A++       + +++
Sbjct: 254 YLIEDYWRQAHLEAGYQFLYTPHLANLDLWKTSGHWDFYRDNMFEAIEL------EQQSY 307

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
            +KPMNCP HV  + + L SYRE P+R AE G+VYR E SG LHGLMRVRGFTQDDAH+F
Sbjct: 308 QIKPMNCPFHVLTYQNDLHSYREFPLRWAELGTVYRYERSGVLHGLMRVRGFTQDDAHIF 367

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDT 454
           C  EQ+  E L + NL   I  DFGF    + LSTRP K VGSD++W+ A      +++ 
Sbjct: 368 CLPEQIAAEILGVLNLTEKILSDFGFTNYQINLSTRPSKSVGSDSVWELA---TAALIEA 424

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH 514
           +     D I      G GAFYGPK +  ++DAIGR WQC TIQVDFNLP RF+  YV   
Sbjct: 425 LNAKKWDYIEDQ---GGGAFYGPKIDIKIQDAIGRMWQCSTIQVDFNLPERFDMQYVARD 481

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANL 574
             +  P+MIHRA+FGS+ERF GI+IEN+ G+ PLWL+PIQ  +  ++     YA  +A  
Sbjct: 482 GTRERPIMIHRAIFGSLERFFGILIENYAGDFPLWLAPIQVRLLPVSDEQQHYALGVAMQ 541

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           LK     +E D   E +  +IR   ++KIP++ + G +E S +++ +R         ++L
Sbjct: 542 LKQAGYRVEIDKTGERLGKQIRTGELEKIPVLAVIGKREVSSKTLSVRTRQGGDLGSMTL 601

Query: 635 LDAI-----PILTKESL 646
           +D +      IL+K +L
Sbjct: 602 VDLLGKMQTAILSKTNL 618


>gi|288553677|ref|YP_003425612.1| threonyl-tRNA synthetase [Bacillus pseudofirmus OF4]
 gi|288544837|gb|ADC48720.1| threonyl-tRNA synthetase [Bacillus pseudofirmus OF4]
          Length = 643

 Score =  515 bits (1326), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 260/652 (39%), Positives = 415/652 (63%), Gaps = 20/652 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSI 59
           M   +K+TFPDG++K FP   T  D+A SIS  L KKA+A  +N  + DL  P+ E G I
Sbjct: 1   MADVLKITFPDGAVKEFPRGTTTEDIAASISPGLKKKALAGKLNHTLVDLRTPLTEDGEI 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            I+T +   +L ++RHS AH+MA+AV+ ++  V++ +GP+IE GFYYD D E+  ++++L
Sbjct: 61  AIVTQDSEEALEIMRHSTAHLMAQAVKRLFKGVKLGVGPVIEGGFYYDIDSEESITAEDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IEK+M++IIA +   ++  LS  +A   ++   + YK+E++E+IP  E++T+Y QGE+
Sbjct: 121 PKIEKEMKKIIAENLEVIRVELSRGEAIVRYKEVGDEYKLELIEAIPEGESLTIYEQGEF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRG HV ST ++K+ FKL+ +AGAYWRGDS   ML RIYGTA+  + +L ++L  LE
Sbjct: 181 FDLCRGVHVPSTNKIKE-FKLLSLAGAYWRGDSKNKMLQRIYGTAFFKKADLEEHLRLLE 239

Query: 240 ESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTP 297
           E+++RDHRKL +E+ +F +++  G G+  W  KG  + + +  Y+  ++ +  Y+ + TP
Sbjct: 240 EAKERDHRKLGKELGIFALSQKVGQGLPLWLPKGATVRRVIERYIVDKEERLGYQHVYTP 299

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    L++ SGHWD Y+ +MF V   D+       F L+PMNCP H+ V+   ++SYR+
Sbjct: 300 ILGSSELYKTSGHWDHYKDDMFPVMERDN-----EEFVLRPMNCPHHMMVYKQDMRSYRQ 354

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AE G ++R E SG++ GL RVRG T +DAH+FC  +Q+  E L++  LI  +YKD
Sbjct: 355 LPLRIAELGMMHRYEMSGAVSGLQRVRGMTLNDAHIFCRPDQIKEEFLRVVYLIQEVYKD 414

Query: 418 FGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           FG +    +LS R     EK    DA+W+ A++++K  +D +       ++     GE A
Sbjct: 415 FGLDDYKFRLSYRDPEDKEKYFDDDAMWEKAQSMLKEAMDELD------VDYYEAEGEAA 468

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  ++ A+G+D    T+Q+DF LP RF+  YV    ++  PV++HR V  ++ER
Sbjct: 469 FYGPKLDVQVRTALGKDETLSTVQLDFLLPERFDLTYVGEDGQQHRPVVVHRGVVSTMER 528

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETIN 592
           F+  ++E +KG  P WL+P+Q  V  ++    ++YA+++ + L+     +E D RNE I 
Sbjct: 529 FVAFLLEEYKGAFPTWLAPVQVQVIPVSPDVHLDYAKKVQDALQQAGARVEIDERNEKIG 588

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           YKIRE  ++KIP +++ GDKE    ++ IR++G   ++   L   I  L +E
Sbjct: 589 YKIREAQMQKIPYMLVLGDKEMESGAVNIRKYGEQASESKELQAFISDLAEE 640


>gi|257865905|ref|ZP_05645558.1| threonyl-tRNA synthetase [Enterococcus casseliflavus EC30]
 gi|257872238|ref|ZP_05651891.1| threonyl-tRNA synthetase [Enterococcus casseliflavus EC10]
 gi|257799839|gb|EEV28891.1| threonyl-tRNA synthetase [Enterococcus casseliflavus EC30]
 gi|257806402|gb|EEV35224.1| threonyl-tRNA synthetase [Enterococcus casseliflavus EC10]
          Length = 646

 Score =  515 bits (1326), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 260/634 (41%), Positives = 403/634 (63%), Gaps = 23/634 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPE 65
           +TFPDG+ K F V  T  ++AESIS+SLAKKA+A  +NG++ DLS P+ E  +IEI+TP+
Sbjct: 5   ITFPDGAKKEFAVGVTTKEIAESISKSLAKKALAGKVNGQLIDLSRPIEEDATIEIVTPD 64

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQIEK 124
              +L ++RHS AH+MA+A++ ++  +   +GP I+ GFYYD D  E P ++++L  IE 
Sbjct: 65  HEDALGLLRHSTAHLMAQAMRRLYTSIHFGVGPAIDSGFYYDTDNGENPITAEDLPAIEA 124

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
           +M +II  +    ++ L+ E+A  LF   ++ YKVE++  +P  E +T Y+QGE+ DLCR
Sbjct: 125 EMMKIIKENLAIERRVLTKEEALTLF--AEDPYKVELITELPDDETITAYQQGEFVDLCR 182

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV STG+++  +KL+ VAGAYWRG S+  M+ R+YGTA+  +++L +++   EE+++R
Sbjct: 183 GPHVPSTGRIQ-VYKLLSVAGAYWRGSSDNQMMQRVYGTAFFDKKDLKEFIRLREEAKER 241

Query: 245 DHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQ 302
           DHRKL +E++LF ++ E G+G+ FW  KG  I +T+  Y+  ++I   Y+ + TP + + 
Sbjct: 242 DHRKLGKELELFMLSPEVGAGLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIMANV 301

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            L++ SGHWD Y  +MF        + D     L+PMNCP H+ V+ + + SYRELP+R+
Sbjct: 302 DLYKTSGHWDHYHEDMFPPM----DMGDGEMLVLRPMNCPHHMMVYKNDIHSYRELPIRI 357

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AE G ++R E SG+L GL RVR  T +D H F   +Q+  E  +  +L+I +Y+DF    
Sbjct: 358 AELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKEEFKRTLDLMIGVYEDFNITD 417

Query: 423 IMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
              +LS R     +K    DA+W++A+ ++K  +D ++      ++     GE AFYGPK
Sbjct: 418 YRFRLSYRDPQNKDKYFDDDAMWENAQTMLKAAMDELE------LDYFEAEGEAAFYGPK 471

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH-PVMIHRAVFGSIERFIGI 537
            +  +K A+G +    TIQ+DF LP RF+  YV    E  H PV+IHR +  ++ERF+  
Sbjct: 472 LDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENNHRPVVIHRGIVSTMERFVAY 531

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           + E +KG  P WL+PIQA +  ++  A  +YA EI   L++  L +E D RNE + YKIR
Sbjct: 532 LTEVYKGAFPTWLAPIQASIIPVSVEAHSDYAYEIKERLQAQGLRVEVDDRNEKMGYKIR 591

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
               +KIP  I+ GD+E ++ ++ IRR+GS  TQ
Sbjct: 592 ASQTQKIPYQIVVGDQEVNDATVNIRRYGSKETQ 625


>gi|257420184|ref|ZP_05597178.1| threonyl-tRNA synthetase [Enterococcus faecalis T11]
 gi|257162012|gb|EEU91972.1| threonyl-tRNA synthetase [Enterococcus faecalis T11]
          Length = 645

 Score =  515 bits (1326), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 260/635 (40%), Positives = 402/635 (63%), Gaps = 23/635 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDP-VREGSIEIIT 63
           I +TFPDG++K F    T  DVA+SIS SLAKKA+A   NG + DL  P V +GS+EI+T
Sbjct: 3   IHITFPDGAVKPFDSGVTTFDVAKSISNSLAKKALAGKFNGVLIDLDRPIVEDGSLEIVT 62

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
           P+   +L ++RHS AH+MA A++ ++P ++  +GP I+ GFYYD D  + P ++++L  I
Sbjct: 63  PDHEDALGILRHSSAHLMANALRRLFPNIKFGVGPAIDSGFYYDTDNGKSPVTAEDLPAI 122

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M +I+  ++P +++ +S  +A ELF    + YKVE++  +P  E +T+Y QG++ DL
Sbjct: 123 EAEMMKIVKENNPIVRKEISRAEALELFAD--DPYKVELITDLPEDEIITVYDQGDFVDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRG HV STG+++  FKL+ VAGAYWRG+S+  M+ RIYGTA+  +++L +++   EE++
Sbjct: 181 CRGVHVPSTGRIQ-VFKLLSVAGAYWRGNSDNHMMQRIYGTAFFDKKDLKEFIKMREEAK 239

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVL 300
           +RDHRKL +E+DLF ++++ GSG+ FW  KG  I +T+  Y+  ++I   Y+ + TP + 
Sbjct: 240 ERDHRKLGKELDLFMVSQEVGSGLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIMA 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D  L++ SGHWD Y  +MF        + D     L+PMNCP H+ V+ + + SYRELP+
Sbjct: 300 DVELYKTSGHWDHYHEDMFPPM----DMGDGEMLVLRPMNCPHHMMVYKNDIHSYRELPI 355

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  +   L++++Y DF  
Sbjct: 356 RIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVAVYADFNI 415

Query: 421 EKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
                +LS R     +K    DA+W+ A+ ++K  +D ++      ++     GE AFYG
Sbjct: 416 TDYRFRLSYRDPNNTDKYFDDDAMWEKAQAMLKAAMDELE------LDYFEAEGEAAFYG 469

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH-PVMIHRAVFGSIERFI 535
           PK +  +K A+G +    TIQ+DF LP RF+  YV    E  H PV+IHR +  ++ERF+
Sbjct: 470 PKLDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTMERFV 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
             + E +KG  P WL+PIQA +  ++  A  EYA EI   L++  L +E D RNE + YK
Sbjct: 530 AYLTEVYKGAFPTWLAPIQATIIPVSVEAHSEYAYEIKERLQAQGLRVEVDDRNEKMGYK 589

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           IR    +K+P  ++ GDKE  + ++ +RR+GS  T
Sbjct: 590 IRASQTQKVPYQLVVGDKEMEDATVNVRRYGSKET 624


>gi|258512139|ref|YP_003185573.1| threonyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257478865|gb|ACV59184.1| threonyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 648

 Score =  514 bits (1325), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 255/635 (40%), Positives = 396/635 (62%), Gaps = 28/635 (4%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
           M  ++ +   DGS +  P  +T +++A+SIS  L K+AV   +NG + DLS  V +G+ +
Sbjct: 1   MSQEVTVRLKDGSERRVPAGSTYAELAQSISPRLGKEAVVARVNGALVDLSREVEDGAQV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           E++T +DP  L V+RH+CAH+MA+AVQ ++P  + AIGP+IE+GFYYDF  +  F  ++L
Sbjct: 61  ELLTLQDPEGLYVMRHTCAHVMAQAVQRLFPGTKCAIGPVIENGFYYDF-ADHDFHPEDL 119

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IE++M+ IIA D P  ++ +S E+A   F  + + +KVEI+E +P    +TLYRQGE+
Sbjct: 120 PRIEEEMKRIIAEDLPIHREVVSREEALRFFRDRGDRFKVEIIEDLPEDVTLTLYRQGEF 179

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPH+ STG++K  F+L   AGAYWRGDS R ML+R+YG A+  + +L +Y    +
Sbjct: 180 VDLCRGPHLPSTGRIK-VFQLQNFAGAYWRGDSKREMLTRVYGVAFAKKSDLDEYNRLQQ 238

Query: 240 ESEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           E+ +RDHR+L +E+++F ++ E G G+  W   G KI + +  Y+    +   Y+ + TP
Sbjct: 239 EARERDHRRLGKELEIFTLSPEVGQGLPLWLPNGAKIRRIIERYIVDLEESLGYQHVYTP 298

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  L++ SGHW+ Y+ +M+     D+         L+PMNCP H+ V+ H L SYRE
Sbjct: 299 HLANVELYKISGHWEHYKDDMYPPMKIDNE-----ELVLRPMNCPHHMMVYKHRLHSYRE 353

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AE G+++R E SG+L GL RVR  T +DAH+FC  +Q+  E   +  LI  +YKD
Sbjct: 354 LPIRIAELGTMHRYEMSGALAGLQRVRAMTLNDAHIFCRPDQIEQEFTGVVRLIQRVYKD 413

Query: 418 FGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL---- 469
           FG +    +LS R     EK V +D +W+ A++ ++ V+          ++ G+      
Sbjct: 414 FGIDDYYHRLSYRDPKNTEKYVQNDEMWELAQSTLRKVM----------LDLGLEFVEAE 463

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG 529
           GE AFYGPK +  ++ A+G+D    TIQ+DF+LP+RFN  YV    E+  PV+IHR V G
Sbjct: 464 GEAAFYGPKLDVQVRTALGKDETLSTIQLDFHLPNRFNLEYVGEDGERHRPVVIHRGVVG 523

Query: 530 SIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE 589
           ++ERF+  +IE +KG  P WL+P Q +V ++      YA+E+A  L+   +  E D  + 
Sbjct: 524 TMERFVAFLIEQYKGAFPTWLAPTQVVVASVADEFAGYAEEVAAKLRELGIRAEADVSDN 583

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRF 624
            I YKIR+    KIP  ++ G +E  E S+ +R++
Sbjct: 584 KIGYKIRQAQTHKIPYTLVVGAREREEGSVSVRKY 618


>gi|253577580|ref|ZP_04854892.1| threonyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str.
           D14]
 gi|251843049|gb|EES71085.1| threonyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str.
           D14]
          Length = 645

 Score =  514 bits (1325), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 260/653 (39%), Positives = 411/653 (62%), Gaps = 29/653 (4%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           + +  PDGS++ +   ++  DVA SIS  L K A+A  ING   DL+  + +G+ +EIIT
Sbjct: 3   VSVILPDGSVREYAEGSSLEDVAASISSGLRKNALAGKINGVAVDLNTKLVDGAKVEIIT 62

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIW--PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
            +    L ++RHS AH+MA+AV+ ++   EV++ IGP+IEDGFYYD D E P + ++L +
Sbjct: 63  GDSQEGLEIMRHSSAHLMAQAVKRLFGNKEVKLGIGPVIEDGFYYDMDLEHPLNPEDLQK 122

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK+M+ II  + P  ++ +S E+A  ++    + YK+EI+  +P    +++Y QGE+FD
Sbjct: 123 IEKEMERIIGENLPITRREVSREEALAIYTELDDPYKLEIIRELPEGSVISIYDQGEFFD 182

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG++K  FKL+ VAGAYWRG+SN  ML RIYGTA+  + +L  +L+ LEE+
Sbjct: 183 LCRGPHVPSTGKIK-VFKLLSVAGAYWRGNSNNKMLQRIYGTAFMKKADLDHHLHMLEEA 241

Query: 242 EKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           +KRDHRKL +E+++F      G G+  W  KG  + +TL  Y+   + +  Y+ + TP +
Sbjct: 242 KKRDHRKLGKELNIFTFNNLVGQGLPIWLPKGATVRRTLERYIVDIEERLGYQHVYTPVL 301

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +  L++ SGHW+ Y+ +MF  K A DT      F L+PMNCP H+ V+   ++SYR+LP
Sbjct: 302 GNVDLYKTSGHWEHYQEDMFP-KMAIDT----EEFVLRPMNCPHHMMVYKSDMRSYRDLP 356

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G  +R E SG+L GL RVR  T +DAH+FC  +Q+ +E  ++ +LI  +Y DFG
Sbjct: 357 IRIAELGMQHRYEMSGALTGLHRVRSMTLNDAHIFCRLDQIKDEFKRVLDLIKQVYNDFG 416

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL----GE 471
             +   +LS R     EK   +D +W+ A+ +++ V++            G+      GE
Sbjct: 417 IHEYRFRLSYRDPQDTEKYYQNDEMWNTAQRMLREVVE----------EAGLPFFEAEGE 466

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
            AFYGPK +  +K A+G++    T+Q+DF LP RF   YV    +K  PV++HR + G++
Sbjct: 467 AAFYGPKLDVQIKTALGKEETLSTVQIDFLLPERFELEYVGDDGQKHRPVVLHRGILGTM 526

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           ERF   ++ENF GNLPLWL+P+QA V  ++S+   YA+++ + L++  +  E+D RNE +
Sbjct: 527 ERFTAFLLENFAGNLPLWLAPVQAKVLPVSSNFDAYARQVEDKLRAAGIRAESDLRNEKL 586

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            YKIRE  ++K+P +++ G+ E +  ++ +R+ G       ++ + I  L +E
Sbjct: 587 GYKIREAQLEKLPYMLVVGENEQNAGTVSVRKRGQGDLGAKAVDEVIAQLQEE 639


>gi|189466356|ref|ZP_03015141.1| hypothetical protein BACINT_02731 [Bacteroides intestinalis DSM
           17393]
 gi|189434620|gb|EDV03605.1| hypothetical protein BACINT_02731 [Bacteroides intestinalis DSM
           17393]
          Length = 646

 Score =  514 bits (1324), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 264/648 (40%), Positives = 398/648 (61%), Gaps = 19/648 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIEIITP 64
           IK+TFPDGS++ +    TG  +AESIS  LA++ +A  +NG++ DL  P+ E +  ++  
Sbjct: 2   IKITFPDGSVREYNDGVTGLQIAESISSRLAQEVLACGVNGEIYDLGRPINEDAEFVLYK 61

Query: 65  -EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
            ED +      H+ AH++AEA+Q ++P +Q  IGP IE+GFYYD D  E      +L  I
Sbjct: 62  WEDEQGKHAFWHTSAHLLAEALQELYPGIQFGIGPAIENGFYYDVDPGEATIKESDLPAI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E KM E++A+    +++ +S   A   F  + E YK E++  +    ++T Y QG + DL
Sbjct: 122 EAKMAELVAKKEAVVRESISKADALTKFGDRGETYKCELISEL-EDGHITTYTQGAFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ +T  +K   KLM VAGAYWRG  +R M++RIYG  +  ++ L +YL  LEE++
Sbjct: 181 CRGPHLMTTAPIKAI-KLMSVAGAYWRGHEDRKMMTRIYGITFPKKKMLDEYLVVLEEAK 239

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           KRDHRK+ REMDLF  ++  G G+  W  KG  +   L  ++RR + + DY+E+ TP + 
Sbjct: 240 KRDHRKIGREMDLFMFSDTVGKGLPMWLPKGTALRLRLQEFLRRIQARYDYQEVITPPIG 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ L+  SGH+  Y  + F       T ++   + LKPMNCP H  ++ +  +SY++LP+
Sbjct: 300 NKLLYITSGHYAKYGKDSFQ---PIHTPEEGEEYFLKPMNCPHHCMIYKNSPRSYKDLPL 356

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLAEFG+V R E SG LHGL RVR FTQDDAH+FC  +Q+ +E L++ ++I  +++   F
Sbjct: 357 RLAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKDEFLRVMDIISIVFRSMEF 416

Query: 421 EKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
             +  ++S R     EK +GSD  W+ AE  +      I+   +  +   +  GE AFYG
Sbjct: 417 ANVEAQISLRDKVNREKYIGSDENWERAEQAI------IEACEEKGLTARIEYGEAAFYG 470

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK ++++KDAIGR WQ GTIQVD+NLP RF+  Y  + ++K  PVMIHRA FGS+ERF+ 
Sbjct: 471 PKLDFMVKDAIGRRWQLGTIQVDYNLPERFDLEYTGADNQKHRPVMIHRAPFGSMERFVA 530

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           ++IE+  G  PLWL+P Q  +  I+    +YAQE+   LK + +    D RNE I  KIR
Sbjct: 531 VLIEHTAGKFPLWLTPEQVAILPISEKFNDYAQEVKKFLKQYDIRAIVDERNEKIGRKIR 590

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           ++ +K+IP ++I G+KEA  R + +R+ G      +   +   IL +E
Sbjct: 591 DNELKRIPYMLIVGEKEAENREVSVRKQGEGDKGTMKFEEFAKILNEE 638


>gi|152976959|ref|YP_001376476.1| threonyl-tRNA synthetase [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|152025711|gb|ABS23481.1| threonyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98]
          Length = 643

 Score =  514 bits (1324), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 250/642 (38%), Positives = 400/642 (62%), Gaps = 20/642 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M   +K+TFPDG++K FP   T  ++A SIS  L KKAVA  +N ++ DL  P+ ++G+I
Sbjct: 1   MADVVKITFPDGAVKEFPKGITTEEIAASISPGLKKKAVAGKLNDEMLDLRTPIEKDGAI 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            I+T +    L ++RHS AH++A+A++ ++ +V++ IGP+IE+GFYYD D E+  + ++ 
Sbjct: 61  SIVTLDSEDGLYILRHSTAHLLAQALKRLYKDVKLGIGPVIENGFYYDIDMEEAITVEDF 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IEK+MQ+I+  +   ++  +   +A   +E   +  K+E++  +P    +++Y QGE+
Sbjct: 121 PKIEKEMQKIVNENLEIVRHEVPRAEALRRYEEINDELKLELINDLPEDAVISIYEQGEF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRG H+ STG++ K FKL+ VAGAYWRGDSN  ML RIYGTA+  + EL +++  LE
Sbjct: 181 FDLCRGVHLPSTGKI-KVFKLLSVAGAYWRGDSNNKMLQRIYGTAFVKKAELDEHMRMLE 239

Query: 240 ESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTP 297
           E+++RDHRKL +E+ LF   +  G G+  W  KG  I + +  Y+  +++   Y  + TP
Sbjct: 240 EAKERDHRKLGKELKLFTNNQKVGQGLPLWLPKGATIRRIIERYIVDKEVSLGYNHVYTP 299

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +  + L++ SGHW+ YR  MF     D+         L+PMNCP H+ V+ + + SYRE
Sbjct: 300 VLGSRELYETSGHWNHYRDGMFPSMQMDN-----EELVLRPMNCPHHMMVYKNDIHSYRE 354

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+  E  ++ NL + +YKD
Sbjct: 355 LPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVYKD 414

Query: 418 FGFEKIMVKLSTR-PE---KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           FG E    +LS R PE   K    D +W+ A+ ++K  +D +     +        GE A
Sbjct: 415 FGLENYSFRLSYRDPEDTKKYYADDEMWEKAQGMLKEAMDEMGLEYYE------AEGEAA 468

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  ++ A+G+D    T+Q+DF LP RF   YV    ++  PV+IHR V  ++ER
Sbjct: 469 FYGPKLDVQVRTALGKDETLSTVQLDFLLPERFELTYVGEDGKQHRPVVIHRGVVSTMER 528

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETIN 592
           F+  +IE +KG  P WL+P+Q  V  ++    ++YA+++   L+   + +E D R E I 
Sbjct: 529 FVAFLIEEYKGAFPTWLAPVQVQVIPVSPQVHLDYAKKVQEELQRAGIRVEVDTREEKIG 588

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           YKIRE  ++KIP +++ GD E +E  + +R++G   ++ ++L
Sbjct: 589 YKIREAQMQKIPYMLVVGDNEVAENGVNVRKYGEQKSETIAL 630


>gi|329954516|ref|ZP_08295607.1| threonine--tRNA ligase [Bacteroides clarus YIT 12056]
 gi|328527484|gb|EGF54481.1| threonine--tRNA ligase [Bacteroides clarus YIT 12056]
          Length = 646

 Score =  514 bits (1323), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 262/629 (41%), Positives = 391/629 (62%), Gaps = 19/629 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+TFPDGS++ +    TG  +AESIS  LA+  +A  +NG++ DL  P+ E   + +  
Sbjct: 2   IKITFPDGSVREYNEGVTGLQIAESISSRLAQDVLACGVNGEIYDLGRPINEDAEVVLYK 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
            ED +      H+ AH++AEA+Q ++P +Q  IGP IE+GFYYD D  E      +L  I
Sbjct: 62  WEDEQGKHAFWHTSAHLLAEALQELYPGIQFGIGPAIENGFYYDVDPGEAAIKEADLPAI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EKKM E++AR    +++ +S   A ++F  + E YK E++  +    ++T Y QG + DL
Sbjct: 122 EKKMAELVARKEGVVRESISKTDALKMFGDRGETYKCELISEL-EDGHITTYTQGAFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ +T  +K   KL  VAGAYWRG  +R M++RIYG  +  ++ L +YL  LEE++
Sbjct: 181 CRGPHLMTTAPIKAI-KLTSVAGAYWRGQEDRKMMTRIYGITFPKKKMLDEYLVLLEEAK 239

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           KRDHRK+ +EMDLF  ++  G G+  W  KG  +   L  ++RR + + DY+E+  P + 
Sbjct: 240 KRDHRKIGKEMDLFMFSDTVGKGLPMWLPKGAALRIRLQEFLRRIQARYDYQEVMCPPIG 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ L+  SGH+  Y  + F       T ++   + LKPMNCP H  ++ +  +SY++LP+
Sbjct: 300 NKLLYITSGHYAKYGKDSFQ---PIHTPEEGEEYFLKPMNCPHHCMIYKNSPRSYKDLPL 356

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLAEFG+V R E SG LHGL RVR FTQDDAH+FC  +Q+ +E L++ ++I  +++   F
Sbjct: 357 RLAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKDEFLRVMDIISIVFQSMHF 416

Query: 421 EKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           E    ++S R     EK +GSD  W+ AE  +      I+   +  +   V  GE AFYG
Sbjct: 417 ENFEAQISLRDKVNREKYIGSDENWEKAEQAI------IEACEEKGLKAKVEYGEAAFYG 470

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK ++++KDAIGR WQ GTIQVD+NLP RF   Y  + ++K  PVMIHRA FGS+ERF+ 
Sbjct: 471 PKLDFMVKDAIGRRWQLGTIQVDYNLPERFQLEYTGADNQKHRPVMIHRAPFGSMERFVA 530

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           ++IE+  G  PLWL+P Q  +  I+    +YAQE+ + LK + +    D RNE I  KIR
Sbjct: 531 VLIEHTAGKFPLWLTPDQVAILPISEKFNDYAQEVKDYLKRYDVRAIVDERNEKIGRKIR 590

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFG 625
           ++ +K+IP ++I G+KEA  R + +R+ G
Sbjct: 591 DNEMKRIPYMLIVGEKEAENREVSVRKQG 619


>gi|333029961|ref|ZP_08458022.1| threonyl-tRNA synthetase [Bacteroides coprosuis DSM 18011]
 gi|332740558|gb|EGJ71040.1| threonyl-tRNA synthetase [Bacteroides coprosuis DSM 18011]
          Length = 647

 Score =  514 bits (1323), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 267/648 (41%), Positives = 391/648 (60%), Gaps = 19/648 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIEIITP 64
           IK+TFPD SI+ +    TG  +AESIS  LAK+ +A  +NG+  DL+ P+ E +  ++  
Sbjct: 3   IKITFPDDSIREYEKGVTGLQIAESISPRLAKEVLACGVNGETYDLTRPIEEDAKVVLYK 62

Query: 65  -EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
            ED        H+ AH++AEA+Q+++P +Q  IGP IE GFYYD D         +L  I
Sbjct: 63  WEDEEGKHAFWHTSAHLLAEALQALYPGIQFGIGPAIEQGFYYDVDPGTATIKESDLPTI 122

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E KMQE  +   P +++ +S   A + F  + E YK E++  +    ++T Y QG + DL
Sbjct: 123 EAKMQEFASMKEPLVRKSISKADALKYFADRDETYKCELISEL-EDGHITTYTQGGFTDL 181

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ ST  +K   KL  VAGAYWRG  ++ ML+RIYG  +  ++ LT+YL  +EE++
Sbjct: 182 CRGPHLPSTAPIKAI-KLTTVAGAYWRGQEDKKMLTRIYGITFPKKKLLTEYLEMMEEAK 240

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
           KRDHRK+ +EM+LF  +E  G G+  W  KG  +   L  ++++  K+  YE++ TP + 
Sbjct: 241 KRDHRKIGKEMELFMFSETVGKGLPMWLPKGTALRLRLEDFLKKIQKEFGYEQVITPHIG 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ L+  SGH+  Y  + F       T ++   + LKPMNCP H  ++    +SYRELP+
Sbjct: 301 NKLLYVTSGHYAKYGKDSFQ---PIHTPEEGEEYLLKPMNCPHHCEIYKWTPRSYRELPL 357

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLAEFG+VYR E SG LHGL RVRGFTQDDAH+FC  +Q+  E L + ++I  I+K   F
Sbjct: 358 RLAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCRPDQVKEEFLSVMDIIFIIFKALNF 417

Query: 421 EKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           E    ++S R     EK +GSD  W+ AEN +      ++   +  +   +  GE AFYG
Sbjct: 418 ENFEAQISLRDPVNREKYIGSDENWEKAENAI------VEACKEKGLKAKIEYGEAAFYG 471

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK +++++DA+GR WQ GTIQVD+NLP RFN  Y  + + K  PVMIHRA FGS+ERF+ 
Sbjct: 472 PKLDFMVRDALGRKWQLGTIQVDYNLPERFNLEYTGADNLKHRPVMIHRAPFGSMERFVA 531

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           ++IE+  G  PLWL+P Q  +  I+    +YA E+   L  + +    D RNE I  KIR
Sbjct: 532 VLIEHTAGKFPLWLTPDQVAILPISERFNDYAHEVKKYLDKNDIRASVDDRNEKIGRKIR 591

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           ++ +K+IP ++I G+KEA  R + +R+ G      + L D    L +E
Sbjct: 592 DNEVKRIPYMLIVGEKEAENREVSVRKQGEGDQGVIKLEDFAKKLNEE 639


>gi|229087132|ref|ZP_04219282.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-44]
 gi|228696200|gb|EEL49035.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-44]
          Length = 643

 Score =  513 bits (1322), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 249/642 (38%), Positives = 401/642 (62%), Gaps = 20/642 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSI 59
           M   +K+TFPDG++K FP   T  ++A SIS  L KKAVA  +N ++ DLS P+ E G++
Sbjct: 1   MADVVKITFPDGAVKEFPKGVTTEEIAASISPGLKKKAVAGKLNDEMIDLSTPIEEDGAV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +    L ++RHS AH++A+A++ ++ +V++ IGP+IE+GFYYD D E+  + ++ 
Sbjct: 61  SIITLDSEEGLYILRHSTAHLLAQALKRLYKDVKLGIGPVIENGFYYDIDMEEAITVEDF 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IEK+MQ+I+  +   ++  +   +A   +E   +  K++++  +P    +++Y QGE+
Sbjct: 121 KKIEKEMQKIVNENLEIVRHEVPRAEALRRYEEIGDELKLDLINDLPEDAVISIYEQGEF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRG H+ STG++ K FKL+ VAGAYWRGDS+  ML RIYGTA+  + EL ++L  LE
Sbjct: 181 FDLCRGVHLPSTGKI-KVFKLLSVAGAYWRGDSDNKMLQRIYGTAFVKKAELDEHLRMLE 239

Query: 240 ESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTP 297
           E+++RDHRKL +E+ LF  ++  G G+  W  KG  I + +  Y+  ++    Y+ + TP
Sbjct: 240 EAKERDHRKLGKELKLFTNSQKVGQGLPLWLPKGATIRRIIERYIVDKEASLGYDHVYTP 299

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +  + L++ SGHW+ YR  MF     D+         L+PMNCP H+ V+ + + SYRE
Sbjct: 300 VLGSRELYETSGHWNHYRDGMFPSMEMDN-----EELVLRPMNCPHHMMVYKNDIHSYRE 354

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+  E  ++ NL + +YKD
Sbjct: 355 LPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVYKD 414

Query: 418 FGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           FG E    +LS R     +K    D +W+ A++++K  +D +     +        GE A
Sbjct: 415 FGLENYSFRLSYRDPADTKKYYADDEMWEKAQSMLKEAMDEMGLEYYE------AEGEAA 468

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  ++ A+G+D    T+Q+DF LP RF   YV    ++  PV+IHR V  ++ER
Sbjct: 469 FYGPKLDVQVRTALGKDETLSTVQLDFLLPERFELTYVGEDGKQHRPVVIHRGVVSTMER 528

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETIN 592
           F+  +IE +KG  P WL+P+Q  V  ++    ++YA+++   L+   + +E D R E I 
Sbjct: 529 FVAFLIEEYKGAFPTWLAPVQVQVIPVSPQVHLDYAKKVQEELQRAGIRVEVDTREEKIG 588

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           YKIRE  ++KIP +++ GD E +E  + +R++G   ++ ++L
Sbjct: 589 YKIREAQMQKIPYMLVVGDNEVTENGVNVRKYGEQKSETIAL 630


>gi|218288925|ref|ZP_03493176.1| threonyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1]
 gi|218241014|gb|EED08191.1| threonyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1]
          Length = 648

 Score =  513 bits (1322), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 255/635 (40%), Positives = 395/635 (62%), Gaps = 28/635 (4%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
           M  +I +   DGS +  P  +T + +A+SIS  L K+AV   +NG + DLS  V +G+ +
Sbjct: 1   MSHEITVRLKDGSERRVPAGSTYAQLAQSISPRLGKEAVVARVNGALVDLSREVEDGAQV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           E++T +DP  L V+RH+CAH+MA+AVQ ++P  + AIGP+IE+GFYYDF  +  F  ++L
Sbjct: 61  ELLTLQDPEGLYVMRHTCAHVMAQAVQRLFPGTKCAIGPVIENGFYYDF-ADHDFHPEDL 119

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IE++M+ IIA D P  ++ +S E+A   F  + + +KVEI+E +P    +TLYRQGE+
Sbjct: 120 PRIEEEMKRIIAEDLPIHREVVSREEALRFFRDRGDRFKVEIIEDLPVDVTLTLYRQGEF 179

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPH+ STG++K  F+L   AGAYWRGDS R ML+R+YG A+  + +L +Y    +
Sbjct: 180 VDLCRGPHLPSTGRIK-VFQLQNFAGAYWRGDSKREMLTRVYGVAFAKKSDLDEYNRLQQ 238

Query: 240 ESEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           E+ +RDHR+L +E+++F ++ E G G+  W   G KI + +  Y+    +   Y+ + TP
Sbjct: 239 EARERDHRRLGKELEIFTLSPEVGQGLPLWLPNGAKIRRIIERYIVDLEESLGYQHVYTP 298

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  L++ SGHW+ Y+ +M+     D+         L+PMNCP H+ V+ H L SYRE
Sbjct: 299 HLANVELYKISGHWEHYKDDMYPPMKIDNE-----ELVLRPMNCPHHMMVYKHRLHSYRE 353

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AE G+++R E SG+L GL RVR  T +DAH+FC  +Q+  E   +  LI  +YKD
Sbjct: 354 LPIRIAELGTMHRYEMSGALAGLQRVRAMTLNDAHIFCRPDQIEQEFTGVVRLIQRVYKD 413

Query: 418 FGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL---- 469
           FG +    +LS R     EK V +D +W+ A++ ++ V+          ++ G+      
Sbjct: 414 FGIDDYYHRLSYRDPKNTEKYVQNDEMWELAQSTLRKVM----------LDLGLEFVEAE 463

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG 529
           GE AFYGPK +  ++ A+G+D    TIQ+DF+LP+RFN  YV    E+  PV+IHR V G
Sbjct: 464 GEAAFYGPKLDVQVRTALGKDETLSTIQLDFHLPNRFNLEYVGEDGERHRPVVIHRGVVG 523

Query: 530 SIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE 589
           ++ERF+  +IE +KG  P WL+P Q +V ++      YA+E+A  L+   +  E D  + 
Sbjct: 524 TMERFVAFLIEQYKGAFPTWLAPTQVVVASVADEFAGYAEEVAAKLRELGIRAEADVSDN 583

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRF 624
            I YKIR+    KIP  ++ G +E  E ++ +R++
Sbjct: 584 KIGYKIRQAQTHKIPYTLVVGAREREEGTVSVRKY 618


>gi|301056082|ref|YP_003794293.1| threonyl-tRNA synthetase [Bacillus anthracis CI]
 gi|300378251|gb|ADK07155.1| threonyl-tRNA synthetase [Bacillus cereus biovar anthracis str. CI]
          Length = 645

 Score =  513 bits (1321), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 254/644 (39%), Positives = 403/644 (62%), Gaps = 22/644 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSI 59
           M   +K+TFPDG++K FP   T  ++A SIS  L KKAVA  +N ++ DL  P+ E G++
Sbjct: 1   MADVVKITFPDGAVKEFPKGVTTEEIAASISPGLKKKAVAGKLNDEMIDLVTPIEEDGAV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV--AIGPIIEDGFYYDFDKEQPFSSD 117
            IIT +    L ++RHS AH++A+A++ ++ +V+V   IGP+IE+GFYYD D E+  + +
Sbjct: 61  SIITLDSEDGLYILRHSTAHLLAQALKRLYKDVKVELGIGPVIENGFYYDIDMEEAITVE 120

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +  +IEK+MQ+I+  +   ++  +   +A   FE   +  K++++  +P    +++Y QG
Sbjct: 121 DFKKIEKEMQKIVNENLEIVRHEVPRAEAIRRFEEIGDELKLDLINDLPEDAVISIYEQG 180

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           E+FDLCRG H+ STG++K  FKL+ VAGAYWRGDSN  ML RIYGTA+  + EL ++L  
Sbjct: 181 EFFDLCRGVHLPSTGKIK-VFKLLSVAGAYWRGDSNNKMLQRIYGTAFVKKAELDEHLRM 239

Query: 238 LEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEIN 295
           LEE+++RDHRKL +E+ LF  ++  G G+  W  KG  I + +  Y+  ++    Y+ + 
Sbjct: 240 LEEAKERDHRKLGKELKLFTNSQKVGQGLPLWLPKGATIRRIIERYIVDKEASLGYDHVY 299

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP +  + L++ SGHW+ YR  MF     D+         L+PMNCP H+ V+ + + SY
Sbjct: 300 TPVLGSRELYETSGHWNHYRDGMFPSMEMDN-----EELVLRPMNCPHHMMVYKNDIHSY 354

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+  E  ++ NL + +Y
Sbjct: 355 RELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVY 414

Query: 416 KDFGFEKIMVKLSTR-PE---KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
           KDFG E    +LS R PE   K    D +W+ A+ ++K  +D +       ++     GE
Sbjct: 415 KDFGLENYSFRLSYRDPEDTKKYYADDEMWEKAQGMLKEAMDEMG------LDYYEAEGE 468

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
            AFYGPK +  ++ A+G+D    T+Q+DF LP RF   YV    ++  PV+IHR V  ++
Sbjct: 469 AAFYGPKLDVQVRTALGKDETLSTVQLDFLLPERFELAYVGEDGKQHRPVVIHRGVVSTM 528

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNET 590
           ERF+  +IE +KG  P WL+P+QA V  ++    ++YA+++ + L+   + +E D R E 
Sbjct: 529 ERFVAFLIEEYKGAFPTWLAPVQAQVIPVSPQVHLDYAKKVQDELRRAGIRVELDTREEK 588

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           I YKIRE  ++KIP +++ GD E +E  + +R++G   ++ ++L
Sbjct: 589 IGYKIREAQMQKIPYMLVVGDNEVTENGVNVRKYGEQKSETIAL 632


>gi|304406649|ref|ZP_07388304.1| threonyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
 gi|304344182|gb|EFM10021.1| threonyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
          Length = 645

 Score =  513 bits (1321), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 262/653 (40%), Positives = 401/653 (61%), Gaps = 29/653 (4%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           I++T PDG+++ +   AT  DVA SIS+ L K AVA  I+GKV D+  P+  +  +EI+T
Sbjct: 3   IQVTLPDGAVREYESGATIDDVAGSISKGLQKNAVAGKIDGKVVDIYTPIEADAKVEIVT 62

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIW--PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
            +    L V RHS AH+MA+A++ ++    V++ IGP+IEDGFYYD D EQ  + ++L +
Sbjct: 63  LDSADGLEVYRHSTAHLMAQAIKRLYGNTAVKLGIGPVIEDGFYYDIDLEQSLTPEDLVK 122

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK+M +I+  D P  ++ +  E+A   F    +  K+E++  +P    +T+Y QGE+FD
Sbjct: 123 IEKEMAKIVKEDLPIRRRVVGREEAIATFTELGDPLKLELIRDLPENVELTIYDQGEFFD 182

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ STG++K F KL+ +AGAYWRGDS   ML RIYGTA+  Q +L ++L+FLEE+
Sbjct: 183 LCRGPHLPSTGRIKAF-KLLSIAGAYWRGDSKNKMLQRIYGTAFPKQAQLDEHLHFLEEA 241

Query: 242 EKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-----DYEEIN 295
           +KRDHRKL RE+ +F  + E G G+  W   G ++ +T    M R I D      Y  + 
Sbjct: 242 KKRDHRKLGRELKMFTFSREVGQGLPLWLPNGARVRRT----MERYIVDLEERLGYSHVY 297

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP + +  L++ SGHW+ Y  +MF     D+         L+PMNCP H+ V+   ++SY
Sbjct: 298 TPVLANVELYKISGHWEHYSEDMFPPMALDN-----EELVLRPMNCPHHMMVYKSDMRSY 352

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           R+LP+R+AE G+++R E SG+L GL RVR  T +DAH+FC  +Q+  E  ++ NLI  +Y
Sbjct: 353 RDLPIRVAELGTMHRYEMSGALTGLHRVRAMTLNDAHIFCRPDQIKEEFARVINLIRQVY 412

Query: 416 KDFGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
            DFG ++   +LS R     EK    D +W+ ++ +++ V++ ++      +      GE
Sbjct: 413 ADFGIKEYRFRLSYRDPQDTEKYFPDDNMWEMSQRMLREVVEELE------LPFFEAEGE 466

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
            AFYGPK +  +K A+G++    T Q+DF LP RF   YV    +K  PV+IHR +  ++
Sbjct: 467 AAFYGPKLDVQIKTALGKEETLSTAQLDFLLPERFELEYVGDDGKKHRPVVIHRGIISTM 526

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           ER    ++ENF G LPLWLSP+ A V  ++S+   YA+E+   L +  +  E+D RNE +
Sbjct: 527 ERMTAYLLENFAGALPLWLSPMHARVIPVSSAYDGYAREVEEKLLAAGVRAESDLRNEKL 586

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            YKIRE  ++K+P ++I GD EA   ++ +R+ G        + + I +LT+E
Sbjct: 587 GYKIREAQLEKLPYMLIVGDNEAQAGTVSVRKRGEGDIGSKEVSELIALLTEE 639


>gi|260655005|ref|ZP_05860493.1| threonine--tRNA ligase [Jonquetella anthropi E3_33 E1]
 gi|260630320|gb|EEX48514.1| threonine--tRNA ligase [Jonquetella anthropi E3_33 E1]
          Length = 623

 Score =  513 bits (1321), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 264/617 (42%), Positives = 382/617 (61%), Gaps = 22/617 (3%)

Query: 36  KKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           K AVA  +  +  DL+  V ++  +  ITP+ P  L +IRHS AH++A+AV  ++P    
Sbjct: 16  KNAVAAFVGEEEKDLNIVVEKDAVLRPITPDIPEGLDIIRHSSAHLLADAVTRLFPGAVP 75

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
           AIGP+I+DGFYYD    QP S  +L +IEK+MQ I+ +  P  +  ++  +A +LF+ +K
Sbjct: 76  AIGPVIKDGFYYDIQFPQPISESDLPRIEKEMQRIVKKCVPLERISVTVPEAIQLFKERK 135

Query: 155 EAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNR 214
           + YKVEILE +     V +Y Q  + DLCRGPHV +T +  +  KL+ VAGAYWRGD + 
Sbjct: 136 DPYKVEILEGV-TDPQVNVYWQDTYVDLCRGPHVPNT-KFLRHVKLLSVAGAYWRGDEHN 193

Query: 215 PMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWK 274
            ML+RIYGT ++T + L  YL  +EE++KRDHRK+ +EMDLF   ++G G  F+H KG  
Sbjct: 194 IMLTRIYGTTFDTAEGLETYLKRMEEAKKRDHRKIGKEMDLFSFHKEGIGFPFFHPKGMV 253

Query: 275 IFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           +  +L+ + RR    + Y E  TP +L++ LW QSGHWD Y+ NM+       T  D   
Sbjct: 254 VMNSLLDFWRRLHTLNGYSEARTPMILNRDLWVQSGHWDHYQQNMYF------TTIDEMP 307

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
            A+KPMNCPG + ++   L SY+E P+RLAE G V+R+E +G LHGLMRVR FTQDDAH 
Sbjct: 308 CAIKPMNCPGGILIYKDRLHSYKEFPIRLAELGHVHRHEKTGELHGLMRVRSFTQDDAHH 367

Query: 394 FCTKEQMFNECLKIHNLIISIY-KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
           FCT EQ+ +E   I  L   +Y K FGF K  V+LSTRP+  +GSD LW  AE  ++  L
Sbjct: 368 FCTPEQIKDEVKFIMALDDYVYSKVFGF-KYHVELSTRPDNSIGSDELWATAEKALQETL 426

Query: 453 DTIKNSSQDRINTGVLL--GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFY 510
           +          NT  +L  G+GAFYGPK ++ L+D IGR WQCGTIQ+DF++P +F+  Y
Sbjct: 427 E--------ETNTPYVLNPGDGAFYGPKIDFHLEDCIGRTWQCGTIQLDFSMPEKFDMVY 478

Query: 511 VNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQE 570
           +    ++  PVM+HR + GSIERF+GI+IE + G  P W++P+Q  +  +  S V YA++
Sbjct: 479 IGPDGKEHRPVMLHRTILGSIERFMGILIEQYAGAFPYWMAPVQVKILPVNESHVAYAKD 538

Query: 571 IANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
           + + L      +E D  +E +  KIR   ++K+P +++ GDKE   +++ +R        
Sbjct: 539 LKDQLADRGHRVEIDLSDEKLGKKIRNAQVEKVPFMLVIGDKEVENKTVALRDRAEGDKG 598

Query: 631 KVSLLDAIPILTKESLP 647
            VS      +L  +  P
Sbjct: 599 SVSQEQLFELLANQYDP 615


>gi|228999356|ref|ZP_04158935.1| Threonyl-tRNA synthetase [Bacillus mycoides Rock3-17]
 gi|229006911|ref|ZP_04164541.1| Threonyl-tRNA synthetase [Bacillus mycoides Rock1-4]
 gi|228754311|gb|EEM03726.1| Threonyl-tRNA synthetase [Bacillus mycoides Rock1-4]
 gi|228760301|gb|EEM09268.1| Threonyl-tRNA synthetase [Bacillus mycoides Rock3-17]
          Length = 643

 Score =  513 bits (1321), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 251/642 (39%), Positives = 400/642 (62%), Gaps = 20/642 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSI 59
           M   +K+TFPDG++K FP   T  ++A SIS  L KKAVA  +N ++ DL  P+ E G++
Sbjct: 1   MADVVKITFPDGAVKEFPKGTTTEEIAASISPGLKKKAVAGKLNDEMIDLRTPIEEDGAV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +    L ++RHS AH++A+A++ ++ +V++ IGP+IE+GFYYD D E+  + ++ 
Sbjct: 61  SIITLDSEDGLYILRHSTAHLLAQALKRLYKDVKLGIGPVIENGFYYDIDMEEAITVEDF 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IEK+MQ+I+  +   ++  +   +A   +E   +  K+E++  +P    +++Y QGE+
Sbjct: 121 PKIEKEMQKIVNENLEIVRHEVPRAEALRRYEEIGDELKLELINDLPEDAVISIYEQGEF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           +DLCRG H+ STG++ K FKL+ VAGAYWRGDSN  ML RIYGTA+  + EL ++L  LE
Sbjct: 181 YDLCRGVHLPSTGKI-KMFKLLSVAGAYWRGDSNNKMLQRIYGTAFVKKAELDEHLRMLE 239

Query: 240 ESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTP 297
           E+++RDHRKL +E+ LF  ++  G G+  W  KG  I + +  Y+  ++    Y+ + TP
Sbjct: 240 EAKERDHRKLGKELKLFTNSQKVGQGLPLWLPKGATIRRIIERYIVDKEASLGYDHVYTP 299

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +  + L++ SGHW+ YR  MF     D+         L+PMNCP H+ V+ + + SYRE
Sbjct: 300 VLGSRELYETSGHWNHYRDGMFPSMEMDN-----EELVLRPMNCPHHMMVYKNDIHSYRE 354

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+  E  ++ NL + +YKD
Sbjct: 355 LPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVYKD 414

Query: 418 FGFEKIMVKLSTR-PE---KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           FG E    +LS R PE   K    D +W+ A++++K  +D +     +        GE A
Sbjct: 415 FGLENYSFRLSYRDPEDTKKYYADDEMWEKAQSMLKEAMDEMGLEYYE------AEGEAA 468

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  ++ A+G+D    T+Q+DF LP RF   YV    +   PV+IHR V  ++ER
Sbjct: 469 FYGPKLDVQVRTALGKDETLSTVQLDFLLPERFELTYVGEDGKPHRPVVIHRGVVSTMER 528

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETIN 592
           F+  +IE +KG  P WL+P+Q  V  ++    ++YA+++   L+   + +E D R E I 
Sbjct: 529 FVAFLIEEYKGAFPTWLAPVQVQVIPVSPQVHLDYAKKVQEDLQRAGIRVEVDTREEKIG 588

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           YKIRE  ++KIP +++ GD E +E  + +R++G   ++ ++L
Sbjct: 589 YKIREAQMQKIPYMLVVGDNEVAENGVNVRKYGEQKSETIAL 630


>gi|229019800|ref|ZP_04176603.1| Threonyl-tRNA synthetase [Bacillus cereus AH1273]
 gi|229026025|ref|ZP_04182408.1| Threonyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228735241|gb|EEL85853.1| Threonyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228741525|gb|EEL91722.1| Threonyl-tRNA synthetase [Bacillus cereus AH1273]
          Length = 645

 Score =  513 bits (1320), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 253/644 (39%), Positives = 401/644 (62%), Gaps = 22/644 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSI 59
           M   +K+TFPDG++K FP   T  ++A SIS  L KKAVA  +N ++ DL  P+ E G++
Sbjct: 1   MADVVKITFPDGAVKEFPKGVTTEEIAASISPGLKKKAVAGKLNDEMIDLVTPIEEDGAV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEV--QVAIGPIIEDGFYYDFDKEQPFSSD 117
            IIT +    L ++RHS AH++A+A++ ++ +V  ++ IGP+IE+GFYYD D E+  + +
Sbjct: 61  SIITLDSEDGLYILRHSTAHLLAQALKRLYKDVKLELGIGPVIENGFYYDIDMEEAITVE 120

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +  +IEK+MQ+I+  +   ++  +   +A   FE   +  K++++  +P    +T+Y QG
Sbjct: 121 DFKKIEKEMQKIVNENLEIVRHEVPRAEALRRFEEIGDELKLDLINDLPEDAVITIYEQG 180

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           E+FDLCRG H+ STG++K  FKL+ VAGAYWRGDSN  ML RIYGTA+  + EL ++L  
Sbjct: 181 EFFDLCRGVHLPSTGKIK-VFKLLSVAGAYWRGDSNNKMLQRIYGTAFVKKAELDEHLRM 239

Query: 238 LEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
           LEE+++RDHRKL +E+ LF  ++  G G+  W  KG  I + +  Y+  K     Y+ + 
Sbjct: 240 LEEAKERDHRKLGKELKLFTNSQKVGQGLPLWLPKGATIRRIIERYIVDKEASLGYDHVY 299

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP +  + L++ SGHW+ YR  MF     D+         L+PMNCP H+ V+ + + SY
Sbjct: 300 TPVLGSRELYETSGHWNHYRDGMFPSMEMDN-----EELVLRPMNCPHHMMVYKNDIHSY 354

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+  E  ++ NL + +Y
Sbjct: 355 RELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVY 414

Query: 416 KDFGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
           KDFG E    +LS R     +K    D +W+ A+ ++K  +D +       ++     GE
Sbjct: 415 KDFGLENYSFRLSYRDPADTKKYYADDEMWEKAQGMLKEAMDEMG------LDYYEAEGE 468

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
            AFYGPK +  ++ A+G+D    T+Q+DF LP RF   YV    ++  PV+IHR V  ++
Sbjct: 469 AAFYGPKLDVQVRTALGKDETLSTVQLDFLLPERFELSYVGEDGKQHRPVVIHRGVVSTM 528

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNET 590
           ERF+  +IE +KG  P WL+P+QA V  ++    ++YA+++ + L+   + +E D R E 
Sbjct: 529 ERFVAFLIEEYKGAFPTWLAPVQAQVIPVSPQVHLDYAKKVQDELRRAGIRVELDTREEK 588

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           I YKIRE  ++KIP +++ GD E +E  + +R++G   ++ ++L
Sbjct: 589 IGYKIREAQMQKIPYMLVVGDNEVAENGVNVRKYGEQKSETIAL 632


>gi|229163567|ref|ZP_04291517.1| Threonyl-tRNA synthetase [Bacillus cereus R309803]
 gi|228619949|gb|EEK76825.1| Threonyl-tRNA synthetase [Bacillus cereus R309803]
          Length = 646

 Score =  512 bits (1318), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 252/644 (39%), Positives = 402/644 (62%), Gaps = 22/644 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSI 59
           M   +K+TFPDG++K FP   T  ++A SIS  L KKAVA  +N ++ DL  P+ E G++
Sbjct: 2   MADVVKITFPDGAVKEFPKGVTTEEIAASISPGLKKKAVAGKLNDEMIDLVTPIEEDGAV 61

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV--AIGPIIEDGFYYDFDKEQPFSSD 117
            IIT +    L ++RHS AH++A+A++ ++ +V+V   IGP+IE+GFYYD D E+  + +
Sbjct: 62  SIITLDSEDGLYILRHSTAHLLAQALKRLYKDVKVELGIGPVIENGFYYDIDMEEAITVE 121

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +  +IEK+MQ+I+  +   ++  +   +A   FE   +  K++++  +P    +++Y QG
Sbjct: 122 DFKKIEKEMQKIVNENLEIVRHEVPRAEAIRRFEEIGDELKLDLINDLPEDAVISIYEQG 181

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           E+FDLCRG H+ STG++K  FKL+ VAGAYWRGDSN  ML RIYGTA+  + EL ++L  
Sbjct: 182 EFFDLCRGVHLPSTGKIK-VFKLLSVAGAYWRGDSNNKMLQRIYGTAFVKKAELDEHLRM 240

Query: 238 LEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEIN 295
           LEE+++RDHRKL +E+ LF  ++  G G+  W  KG  I + +  Y+  ++    Y+ + 
Sbjct: 241 LEEAKERDHRKLGKELKLFTNSQKVGQGLPLWLPKGATIRRIIERYIVDKEASLGYDHVY 300

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP +  + L++ SGHW+ YR  MF     D+         L+PMNCP H+ V+ + + SY
Sbjct: 301 TPVLGSRELYETSGHWNHYRDGMFPSMEMDN-----EELVLRPMNCPHHMMVYKNDIHSY 355

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+  E  ++ NL + +Y
Sbjct: 356 RELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVY 415

Query: 416 KDFGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
           KDFG E    +LS R     +K    D +W+ A+ ++K  +D +       ++     GE
Sbjct: 416 KDFGLENYSFRLSYRDPADTKKYYADDEMWEKAQGMLKEAMDEMG------LDYYEAEGE 469

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
            AFYGPK +  ++ A+G+D    T+Q+DF LP RF   YV    ++  PV+IHR V  ++
Sbjct: 470 AAFYGPKLDVQVRTALGKDETLSTVQLDFLLPERFELAYVGEDGKQHRPVVIHRGVVSTM 529

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNET 590
           ERF+  +IE +KG  P WL+P+QA V  ++    ++YA+++ + L+   + +E D R E 
Sbjct: 530 ERFVAFLIEEYKGAFPTWLAPVQAQVIPVSPQVHLDYAKKVQDELRRAGIRVELDTREEK 589

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           I YKIRE  ++KIP +++ GD E +E  + +R++G   ++ ++L
Sbjct: 590 IGYKIREAQMQKIPYMLVVGDNEVTENGVNVRKYGEQKSETIAL 633


>gi|325103180|ref|YP_004272834.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Pedobacter
           saltans DSM 12145]
 gi|324972028|gb|ADY51012.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Pedobacter
           saltans DSM 12145]
          Length = 642

 Score =  512 bits (1318), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 273/651 (41%), Positives = 410/651 (62%), Gaps = 26/651 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           IK+T PDGS++ +    T   +A SIS  LA+  +A  +NG+V D S P+  + +++++T
Sbjct: 2   IKITLPDGSVREYEKGTTAHQIALSISEGLARNVLAAEVNGEVWDSSRPIEHDATVKLLT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQI 122
             D    +   HS AH++AEA+++++P  +  IGP IE GFYYD D  ++ FSSD+L +I
Sbjct: 62  WNDDEGKSTFWHSSAHLLAEALEALYPGTKFGIGPAIETGFYYDVDFGDRDFSSDDLRKI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E KM E+      F ++ +S   A   F  K + YK+++++ +     +T Y QG + DL
Sbjct: 122 EDKMLELAKTKETFERKAVSKSDALAYFTEKGDEYKLDLIKDL-EDGKITFYSQGNFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+  TG +K   KL  VAGAYWRGD +R  L+RIYG ++  Q ELT+Y+  +EE++
Sbjct: 181 CRGPHIPHTGFIKAL-KLTNVAGAYWRGDESRKQLTRIYGVSFPKQSELTEYIQRIEEAK 239

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           KRDHRKL +E++LF  +E  G G+  W  KG  + + L+S++++ + K  Y+++ TP + 
Sbjct: 240 KRDHRKLGKELELFTFSEKVGLGLPLWLPKGTALRERLVSFLQKAQQKAGYDQVITPHIG 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            ++L+  SGH+D Y A+ F       T ++   F LKPMNCP H  ++    +SY++LPV
Sbjct: 300 HKNLYITSGHYDKYGADSFQ---PIKTPQEGEEFFLKPMNCPHHCEIYKSKPRSYKDLPV 356

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLAEFG+VYR E SG LHGL RVRGFTQDDAH+FC  +Q+  E  K+ +L++ ++K  GF
Sbjct: 357 RLAEFGTVYRYEQSGELHGLTRVRGFTQDDAHLFCRPDQVKEEFKKVIDLVLYVFKALGF 416

Query: 421 EKIMVKLSTR-PE---KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           ++ + ++S R PE   K +GSD      EN +      I+ +++  + T V  GE AFYG
Sbjct: 417 DEYIAQVSLRDPENKSKYIGSD------ENWILAENAIIEAAAEKGLPTVVETGEAAFYG 470

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK ++++KDA+GR WQ GTIQVD+NLP RF   Y  S ++K  PVMIHRA FGS+ERF+ 
Sbjct: 471 PKLDFMVKDALGRKWQLGTIQVDYNLPERFELEYTGSDNQKHRPVMIHRAPFGSLERFVA 530

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           ++IE+  GN PLWL+P Q IV  I+    EY +++ + L +  +    D R+E I  KIR
Sbjct: 531 VLIEHCAGNFPLWLTPEQFIVLPISEKFEEYGKKVLDSLNNSDIRGLIDLRDEKIGRKIR 590

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRF-----GSTTTQ--KVSLLDAIPI 640
           +  +KK+P ++I G+KE  +  + +R+      GS T +  K  LLD I I
Sbjct: 591 DAEVKKLPYMLIIGEKEMQDGMVSVRKHGEGDKGSMTIEEFKSLLLDEIKI 641


>gi|228987823|ref|ZP_04147932.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|229158179|ref|ZP_04286246.1| Threonyl-tRNA synthetase [Bacillus cereus ATCC 4342]
 gi|228625137|gb|EEK81897.1| Threonyl-tRNA synthetase [Bacillus cereus ATCC 4342]
 gi|228771871|gb|EEM20328.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 645

 Score =  512 bits (1318), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 252/644 (39%), Positives = 402/644 (62%), Gaps = 22/644 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSI 59
           M   +K+TFPDG++K FP   T  ++A SIS  L KKAVA  +N ++ DL  P+ E G++
Sbjct: 1   MADVVKITFPDGAVKEFPKGVTTEEIAASISPGLKKKAVAGKLNDEMIDLVTPIEEDGAV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV--AIGPIIEDGFYYDFDKEQPFSSD 117
            IIT +    L ++RHS AH++A+A++ ++ +V+V   IGP+IE+GFYYD D E+  + +
Sbjct: 61  SIITLDSEDGLYILRHSTAHLLAQALKRLYKDVKVELGIGPVIENGFYYDIDMEEAITVE 120

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +  +IEK+MQ+I+  +   ++  +   +A   FE   +  K++++  +P    +++Y QG
Sbjct: 121 DFKKIEKEMQKIVNENLEIVRHEVPRAEAIRRFEEIGDELKLDLINDLPEDAVISIYEQG 180

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           E+FDLCRG H+ STG++K  FKL+ VAGAYWRGDSN  ML RIYGTA+  + EL ++L  
Sbjct: 181 EFFDLCRGVHLPSTGKIK-VFKLLSVAGAYWRGDSNNKMLQRIYGTAFVKKAELDEHLRM 239

Query: 238 LEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEIN 295
           LEE+++RDHRKL +E+ LF  ++  G G+  W  KG  I + +  Y+  ++    Y+ + 
Sbjct: 240 LEEAKERDHRKLGKELKLFTNSQKVGQGLPLWLPKGATIRRIIERYIVDKEASLGYDHVY 299

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP +  + L++ SGHW+ YR  MF     D+         L+PMNCP H+ V+ + + SY
Sbjct: 300 TPVLGSRELYETSGHWNHYRDGMFPSMEMDN-----EELVLRPMNCPHHMMVYKNDIHSY 354

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+  E  ++ NL + +Y
Sbjct: 355 RELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVY 414

Query: 416 KDFGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
           KDFG E    +LS R     +K    D +W+ A+ ++K  +D +       ++     GE
Sbjct: 415 KDFGLENYSFRLSYRDPADTKKYYADDEMWEKAQGMLKEAMDEMG------LDYYEAEGE 468

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
            AFYGPK +  ++ A+G+D    T+Q+DF LP RF   YV    ++  PV+IHR V  ++
Sbjct: 469 AAFYGPKLDVQVRTALGKDETLSTVQLDFLLPERFELAYVGEDGKQHRPVVIHRGVVSTM 528

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNET 590
           ERF+  +IE +KG  P WL+P+QA V  ++    ++YA+++ + L+   + +E D R E 
Sbjct: 529 ERFVAFLIEEYKGAFPTWLAPVQAQVIPVSPQVHLDYAKKVQDELRRAGIRVELDTREEK 588

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           I YKIRE  ++KIP +++ GD E +E  + +R++G   ++ ++L
Sbjct: 589 IGYKIREAQMQKIPYMLVVGDNEVTENGVNVRKYGEQKSETIAL 632


>gi|167763511|ref|ZP_02435638.1| hypothetical protein BACSTE_01885 [Bacteroides stercoris ATCC
           43183]
 gi|167698805|gb|EDS15384.1| hypothetical protein BACSTE_01885 [Bacteroides stercoris ATCC
           43183]
          Length = 646

 Score =  512 bits (1318), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 262/629 (41%), Positives = 391/629 (62%), Gaps = 19/629 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIEIITP 64
           IK+TFPDGS++ +    TG  +AESIS  LA+  +A  +NG+V DL  P+ E +  ++  
Sbjct: 2   IKITFPDGSVREYNEGVTGLQIAESISSRLAQDVLACGVNGEVYDLGRPISEDAEVVLYK 61

Query: 65  -EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
            ED +      H+ AH++AEA+Q ++P +Q  IGP IE+GFYYD D  E      +L  I
Sbjct: 62  WEDEQGKHAFWHTSAHLLAEALQELYPGIQFGIGPAIENGFYYDVDPGETAIKEADLPAI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EKKM E+ A+    +++ +S   A ++F  + E YK E++  +    ++T Y QG + DL
Sbjct: 122 EKKMAELAAKKEAVVRESISKTDALKMFGDRGETYKCELISEL-EDGHITTYTQGAFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ +T  +K   KL  VAGAYWRG  +R M++RIYG  +  ++ L +YL  LEE++
Sbjct: 181 CRGPHLMTTAPIKAI-KLTSVAGAYWRGQEDRKMMTRIYGITFPKKKMLDEYLVLLEEAK 239

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           KRDHRK+ +EMDLF  ++  G G+  W  KG  +   L  ++RR + + DY+E+  P + 
Sbjct: 240 KRDHRKIGKEMDLFMFSDTVGKGLPMWLPKGAALRIRLQEFLRRIQARYDYQEVMCPPIG 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ L+  SGH+  Y  + F       T ++   + LKPMNCP H  ++ +  +SY++LP+
Sbjct: 300 NKLLYITSGHYAKYGKDSFQ---PIHTPEEGEEYFLKPMNCPHHCMIYKNSPRSYKDLPL 356

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLAEFG+V R E SG LHGL RVR FTQDDAH+FC  +Q+ +E L++ ++I  +++   F
Sbjct: 357 RLAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKDEFLRVMDIISIVFQSMHF 416

Query: 421 EKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           E    ++S R     EK +GSD  W+ AE  +      I+   +  +   V  GE AFYG
Sbjct: 417 ENFEAQISLRDKVNREKYIGSDENWEKAEQAI------IEACEEKGLKARVEYGEAAFYG 470

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK ++++KDAIGR WQ GTIQVD+NLP RF   Y  + ++K  PVMIHRA FGS+ERF+ 
Sbjct: 471 PKLDFMVKDAIGRRWQLGTIQVDYNLPERFQLEYTGADNQKHRPVMIHRAPFGSMERFVA 530

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           ++IE+  G  PLWL+P Q  +  I+    +YAQE+ + LK + +    D RNE I  KIR
Sbjct: 531 VLIEHTAGKFPLWLTPDQVAILPISEKFNDYAQEVKDYLKRYDVRAIVDERNEKIGRKIR 590

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFG 625
           ++ +K+IP ++I G+KEA  R + +R+ G
Sbjct: 591 DNEMKRIPYMLIVGEKEAENREVSVRKQG 619


>gi|145219006|ref|YP_001129715.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase
           [Prosthecochloris vibrioformis DSM 265]
 gi|189083618|sp|A4SCK4|SYT_PROVI RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|145205170|gb|ABP36213.1| Ser-tRNA(Thr) hydrolase [Chlorobium phaeovibrioides DSM 265]
          Length = 666

 Score =  512 bits (1318), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 260/628 (41%), Positives = 391/628 (62%), Gaps = 16/628 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           + +T PDG+ K  P  +TG D+A  I R LA++AVA+ I+GK  DLS P+  + + EIIT
Sbjct: 11  LTVTLPDGTTKPLPAGSTGMDIALEIGRRLAREAVAIKIDGKAVDLSAPLTADCTAEIIT 70

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            + P    +  HS +HIMA A++ ++P  +   GP IE GFYYD   E  F+ ++L  IE
Sbjct: 71  FDSPEGKEIFWHSASHIMAHAIEELFPGSKFGAGPAIEQGFYYDIASEHRFTEEDLRAIE 130

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKE-AYKVEIL-ESIPAKENVTLYRQGEWFD 181
           ++M  I  RD P +++ +   +A E F + +E  YKVEIL +++   E V+LY +G + D
Sbjct: 131 ERMLLIAGRDIPIVREEMPRIQAIEYFRTVREDPYKVEILTDTLKETETVSLYHEGGFTD 190

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LC GPH+ ST  +K   KL  ++ +YWRGD +R  + RIYG A+ T++ L  +L  LEE+
Sbjct: 191 LCSGPHLFSTAALKAV-KLFNISASYWRGDQSRESMQRIYGIAFPTEKLLKAHLSALEEA 249

Query: 242 EKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           +KRDHRKL  E++LF ++ E GSG+  W  KG  I Q L S+++  + +  Y  + TP +
Sbjct: 250 KKRDHRKLGTELELFMLSPEIGSGLPVWLPKGAIIRQELESFLKEEQRRRGYLPVYTPHI 309

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +  L+++SGH+  Y  + F      D       + LKPMNCP H  +++  ++SYR+LP
Sbjct: 310 GNIDLYKRSGHYPYYSDSQFPPLTYHDEEGKAEQYLLKPMNCPHHHLIYSSKMRSYRDLP 369

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           VRLAEFG+VYR+E SG L+GL+R RGFTQDD+H++C  +Q+ +E     +L   ++   G
Sbjct: 370 VRLAEFGTVYRHEQSGELNGLVRARGFTQDDSHIYCRPDQLVDEICNAIDLTRYVFATLG 429

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           F ++  +LS      P K  G+  +W+ AE  ++   D +K      IN  + +GE +FY
Sbjct: 430 FTEVETRLSMHDPLNPSKYGGTADVWEQAEKDVREAADRMK------INYFIGVGEASFY 483

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++I++DA+GR WQ GT+QVD+ +P RF+  YV S  +K  P++IHRA FGS+ERFI
Sbjct: 484 GPKIDFIVRDALGRKWQLGTVQVDYVMPERFDLSYVGSDGQKHRPIVIHRAPFGSMERFI 543

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
           G++IE+  GN PLWL+P+QA+V  I     +Y  E+ + +    + +E D RNE I  KI
Sbjct: 544 GVLIEHTAGNFPLWLAPVQAVVLPIAEDVHDYGSEVRDAMHRAGIRVELDVRNEKIGRKI 603

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRR 623
           RE  + KIP ++I G KE    S+ +RR
Sbjct: 604 REAELAKIPFMVIVGQKEKEGGSVSLRR 631


>gi|218130015|ref|ZP_03458819.1| hypothetical protein BACEGG_01598 [Bacteroides eggerthii DSM 20697]
 gi|217987818|gb|EEC54144.1| hypothetical protein BACEGG_01598 [Bacteroides eggerthii DSM 20697]
          Length = 646

 Score =  511 bits (1317), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 261/629 (41%), Positives = 391/629 (62%), Gaps = 19/629 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIEIITP 64
           IK+TFPDGS++ +    TG  +AESIS  LA+  +A  +NG+  DL  P+ E +  ++  
Sbjct: 2   IKITFPDGSVREYNEGVTGLQIAESISSRLAQDVLACGVNGETYDLGRPISEDAEVVLYK 61

Query: 65  -EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
            ED +      H+ AH++AEA+Q ++P +Q  IGP IE+GFYYD D  E      +L  I
Sbjct: 62  WEDEQGKHAFWHTSAHLLAEALQELYPGIQFGIGPAIENGFYYDVDPGEATIKEADLPAI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EKKM E++A+    +++ +S   A ++F  + E YK E++  +    ++T Y QG + DL
Sbjct: 122 EKKMAELVAKKEAVVRESISKTDALKMFGDRGETYKCELISEL-EDGHITTYTQGAFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ +T  +K   KL  VAGAYWRG  +R M++RIYG  +  ++ L +YL  LEE++
Sbjct: 181 CRGPHLMTTAPIKAI-KLTSVAGAYWRGQEDRKMMTRIYGITFPKKKMLDEYLVLLEEAK 239

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           KRDHRK+ +EMDLF  ++  G G+  W  KG  +   L  ++RR + + DY+E+  P + 
Sbjct: 240 KRDHRKIGKEMDLFMFSDTVGKGLPMWLPKGAALRIRLQEFLRRIQARYDYQEVMCPPIG 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ L+  SGH+  Y  + F       T ++   + LKPMNCP H  ++ +  +SY++LP+
Sbjct: 300 NKLLYITSGHYAKYGKDSFQ---PIHTPEEGEEYFLKPMNCPHHCMIYKNSPRSYKDLPL 356

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLAEFG+V R E SG LHGL RVR FTQDDAH+FC  +Q+ +E L++ ++I  +++   F
Sbjct: 357 RLAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKDEFLRVMDIISIVFQSMHF 416

Query: 421 EKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           E    ++S R     EK +GSD  W+ AE  +      I+   +  +   V  GE AFYG
Sbjct: 417 ENFEAQISLRDKVNREKYIGSDENWEKAEQAI------IEACEEKGLKAKVEYGEAAFYG 470

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK ++++KDAIGR WQ GTIQVD+NLP RF   Y  + ++K  PVMIHRA FGS+ERF+ 
Sbjct: 471 PKLDFMVKDAIGRRWQLGTIQVDYNLPERFQLEYTGADNQKHRPVMIHRAPFGSMERFVA 530

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           ++IE+  G  PLWL+P Q  +  I+    +YAQE+ + LK + +    D RNE I  KIR
Sbjct: 531 VLIEHTAGKFPLWLTPDQVAILPISEKFNDYAQEVKDYLKRYDVRAIVDERNEKIGRKIR 590

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFG 625
           ++ +K+IP ++I G+KEA  R + +R+ G
Sbjct: 591 DNEMKRIPYMLIVGEKEAENREVSVRKQG 619


>gi|229099037|ref|ZP_04229971.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-29]
 gi|229118067|ref|ZP_04247426.1| Threonyl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|228665290|gb|EEL20773.1| Threonyl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|228684265|gb|EEL38209.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-29]
          Length = 645

 Score =  511 bits (1317), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 252/644 (39%), Positives = 401/644 (62%), Gaps = 22/644 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSI 59
           M   +K+TFPDG++K FP   T  ++A SIS  L KKAVA  +N ++ DL  P+ E G++
Sbjct: 1   MADVVKITFPDGAVKEFPKGVTTEEIAASISPGLKKKAVAGKLNDEMIDLVTPIEEDGAV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEV--QVAIGPIIEDGFYYDFDKEQPFSSD 117
            IIT +    L ++RHS AH++A+A++ ++ +V  ++ IGP+IE+GFYYD D E+  + +
Sbjct: 61  SIITLDSEDGLYILRHSTAHLLAQALKRLYKDVKLELGIGPVIENGFYYDIDMEEAITVE 120

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +  +IEK+MQ+I+  +   ++  +   +A   FE   +  K++++  +P    +++Y QG
Sbjct: 121 DFKKIEKEMQKIVNENLEIVRHEVPRAEALRRFEEIGDELKLDLINDLPEDAVISIYEQG 180

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           E+FDLCRG H+ STG++K  FKL+ VAGAYWRGDSN  ML RIYGTA+  + EL ++L  
Sbjct: 181 EFFDLCRGVHLPSTGKIK-VFKLLSVAGAYWRGDSNNKMLQRIYGTAFVKKAELDEHLRM 239

Query: 238 LEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
           LEE+++RDHRKL +E+ LF  ++  G G+  W  KG  I + +  Y+  K     Y+ + 
Sbjct: 240 LEEAKERDHRKLGKELKLFTNSQKVGQGLPLWLPKGATIRRIIERYIVDKEASLGYDHVY 299

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP +  + L++ SGHW+ YR  MF     D+         L+PMNCP H+ V+ + + SY
Sbjct: 300 TPVLGSRELYETSGHWNHYRDGMFPSMEMDN-----EELVLRPMNCPHHMMVYKNDIHSY 354

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+  E  ++ NL + +Y
Sbjct: 355 RELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVY 414

Query: 416 KDFGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
           KDFG E    +LS R     +K    D +W+ A+ ++K  +D +       ++     GE
Sbjct: 415 KDFGLENYSFRLSYRDPADTKKYYADDEMWEKAQGMLKEAMDEMG------LDYYEAEGE 468

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
            AFYGPK +  ++ A+G+D    T+Q+DF LP RF   YV    ++  PV+IHR V  ++
Sbjct: 469 AAFYGPKLDVQVRTALGKDETLSTVQLDFLLPERFELAYVGEDGKQHRPVVIHRGVVSTM 528

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNET 590
           ERF+  +IE +KG  P WL+P+QA V  ++    ++YA+++ + L+   + +E D R E 
Sbjct: 529 ERFVAFLIEEYKGAFPTWLAPVQAQVIPVSPQVHLDYAKKVQDELRRAGIRVELDTREEK 588

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           I YKIRE  ++KIP +++ GD E +E  + +R++G   ++ ++L
Sbjct: 589 IGYKIREAQMQKIPYMLVVGDNEVTENGVNVRKYGEQKSETIAL 632


>gi|118479724|ref|YP_896875.1| threonyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|118418949|gb|ABK87368.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Bacillus
           thuringiensis str. Al Hakam]
          Length = 646

 Score =  511 bits (1316), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 253/644 (39%), Positives = 402/644 (62%), Gaps = 22/644 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSI 59
           M   +K+TFPDG++K FP   T  ++A SIS  L KKAVA  +N ++ DL  P+ E G++
Sbjct: 2   MADVVKITFPDGAVKEFPKGVTTEEIAASISPGLKKKAVAGKLNDEMIDLVTPIEEDGAV 61

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV--AIGPIIEDGFYYDFDKEQPFSSD 117
            IIT +    L ++RHS AH++A+A++ ++ +V+V   IGP+IE+GFYYD D E+  + +
Sbjct: 62  SIITLDSEDGLYILRHSTAHLLAQALKRLYKDVKVELGIGPVIENGFYYDIDMEEAITVE 121

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +  +IEK+MQ+I+  +   ++  +   +A   FE   +  K++++  +P    +++Y QG
Sbjct: 122 DFKKIEKEMQKIVNENLEIVRHEVPRAEAIRRFEEIGDELKLDLINDLPEDAVISIYEQG 181

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           E+FDLCRG H+ STG++K  FKL+ VAGAYWRGDSN  ML RIYGTA+  + EL ++L  
Sbjct: 182 EFFDLCRGVHLPSTGKIK-VFKLLSVAGAYWRGDSNNKMLQRIYGTAFVKKAELDEHLRM 240

Query: 238 LEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEIN 295
           LEE+++RDHRKL +E+ LF  ++  G G+  W  KG  I + +  Y+  ++    Y+ + 
Sbjct: 241 LEEAKERDHRKLGKELKLFTNSQKVGQGLPLWLPKGATIRRIIERYIVDKEASLGYDHVY 300

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP +  + L++ SGHW+ YR  MF     D+         L+PMNCP H+ V+ + + SY
Sbjct: 301 TPVLGSRELYETSGHWNHYRDGMFPSMEMDN-----EELVLRPMNCPHHMMVYKNDIHSY 355

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+  E  ++ NL + +Y
Sbjct: 356 RELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVY 415

Query: 416 KDFGFEKIMVKLSTR-PE---KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
           KDFG E    +LS R PE   K    D +W+ A+ ++K  +D +       ++     GE
Sbjct: 416 KDFGLENYSFRLSYRDPEDTKKYYADDEMWEKAQGMLKEAMDEMG------LDYYEAEGE 469

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
            AFYGPK +  ++ A+G+D    T+Q+DF LP RF   YV    ++  PV+IHR V  ++
Sbjct: 470 AAFYGPKLDVQVRTALGKDETLSTVQLDFLLPERFELSYVGEDGKQHRPVVIHRGVVSTM 529

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNET 590
           ERF+  +IE +KG  P WL+P+Q  V  ++    ++YA+++ + L+   + +E D R E 
Sbjct: 530 ERFVAFLIEEYKGAFPTWLAPVQVQVIPVSPQVHLDYAKKVQDELRRAGIRVELDTREEK 589

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           I YKIRE  ++KIP +++ GD E +E  + +R++G   ++ ++L
Sbjct: 590 IGYKIREAQMQKIPYMLVVGDNEVTENGVNVRKYGEQKSETIAL 633


>gi|30264646|ref|NP_847023.1| threonyl-tRNA synthetase [Bacillus anthracis str. Ames]
 gi|47530117|ref|YP_021466.1| threonyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49187467|ref|YP_030719.1| threonyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|49481700|ref|YP_038622.1| threonyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|52140935|ref|YP_085897.1| threonyl-tRNA synthetase [Bacillus cereus E33L]
 gi|65321944|ref|ZP_00394903.1| COG0441: Threonyl-tRNA synthetase [Bacillus anthracis str. A2012]
 gi|165871455|ref|ZP_02216102.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167636725|ref|ZP_02395009.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|167642081|ref|ZP_02400304.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|170689721|ref|ZP_02880895.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|170708708|ref|ZP_02899146.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|177653139|ref|ZP_02935426.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|196042361|ref|ZP_03109631.1| threonine--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|218905803|ref|YP_002453637.1| threonyl-tRNA synthetase [Bacillus cereus AH820]
 gi|225866553|ref|YP_002751931.1| threonyl-tRNA synthetase [Bacillus cereus 03BB102]
 gi|227817360|ref|YP_002817369.1| threonyl-tRNA synthetase [Bacillus anthracis str. CDC 684]
 gi|228917215|ref|ZP_04080772.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|228929623|ref|ZP_04092641.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228935883|ref|ZP_04098693.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228948301|ref|ZP_04110584.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|229093673|ref|ZP_04224773.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-42]
 gi|229124142|ref|ZP_04253334.1| Threonyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|229186832|ref|ZP_04313987.1| Threonyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
 gi|229601552|ref|YP_002868855.1| threonine--tRNA ligase [Bacillus anthracis str. A0248]
 gi|254686931|ref|ZP_05150789.1| threonyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066]
 gi|254720893|ref|ZP_05182684.1| threonyl-tRNA synthetase [Bacillus anthracis str. A1055]
 gi|254736684|ref|ZP_05194390.1| threonyl-tRNA synthetase [Bacillus anthracis str. Western North
           America USA6153]
 gi|254741722|ref|ZP_05199409.1| threonyl-tRNA synthetase [Bacillus anthracis str. Kruger B]
 gi|254754681|ref|ZP_05206716.1| threonyl-tRNA synthetase [Bacillus anthracis str. Vollum]
 gi|254757513|ref|ZP_05209540.1| threonyl-tRNA synthetase [Bacillus anthracis str. Australia 94]
 gi|30259321|gb|AAP28509.1| threonine--tRNA ligase [Bacillus anthracis str. Ames]
 gi|47505265|gb|AAT33941.1| threonyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49181394|gb|AAT56770.1| threonyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|49333256|gb|AAT63902.1| threonine--tRNA ligase (threonyl-tRNA synthetase) [Bacillus
           thuringiensis serovar konkukian str. 97-27]
 gi|51974404|gb|AAU15954.1| threonine--tRNA ligase (threonyl-tRNA synthetase) [Bacillus cereus
           E33L]
 gi|164712752|gb|EDR18282.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167509956|gb|EDR85379.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|167527843|gb|EDR90677.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|170126388|gb|EDS95277.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|170666324|gb|EDT17113.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|172081663|gb|EDT66734.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|196026805|gb|EDX65442.1| threonine--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|218536622|gb|ACK89020.1| threonyl-tRNA synthetase [Bacillus cereus AH820]
 gi|225787158|gb|ACO27375.1| threonine--tRNA ligase [Bacillus cereus 03BB102]
 gi|227005330|gb|ACP15073.1| threonine--tRNA ligase [Bacillus anthracis str. CDC 684]
 gi|228596569|gb|EEK54234.1| Threonyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
 gi|228659444|gb|EEL15092.1| Threonyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|228689760|gb|EEL43567.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-42]
 gi|228811288|gb|EEM57626.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228823651|gb|EEM69473.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228830010|gb|EEM75629.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228842416|gb|EEM87507.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|229265960|gb|ACQ47597.1| threonine--tRNA ligase [Bacillus anthracis str. A0248]
          Length = 645

 Score =  511 bits (1316), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 253/644 (39%), Positives = 402/644 (62%), Gaps = 22/644 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSI 59
           M   +K+TFPDG++K FP   T  ++A SIS  L KKAVA  +N ++ DL  P+ E G++
Sbjct: 1   MADVVKITFPDGAVKEFPKGVTTEEIAASISPGLKKKAVAGKLNDEMIDLVTPIEEDGAV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV--AIGPIIEDGFYYDFDKEQPFSSD 117
            IIT +    L ++RHS AH++A+A++ ++ +V+V   IGP+IE+GFYYD D E+  + +
Sbjct: 61  SIITLDSEDGLYILRHSTAHLLAQALKRLYKDVKVELGIGPVIENGFYYDIDMEEAITVE 120

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +  +IEK+MQ+I+  +   ++  +   +A   FE   +  K++++  +P    +++Y QG
Sbjct: 121 DFKKIEKEMQKIVNENLEIVRHEVPRAEAIRRFEEIGDELKLDLINDLPEDAVISIYEQG 180

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           E+FDLCRG H+ STG++K  FKL+ VAGAYWRGDSN  ML RIYGTA+  + EL ++L  
Sbjct: 181 EFFDLCRGVHLPSTGKIK-VFKLLSVAGAYWRGDSNNKMLQRIYGTAFVKKAELDEHLRM 239

Query: 238 LEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEIN 295
           LEE+++RDHRKL +E+ LF  ++  G G+  W  KG  I + +  Y+  ++    Y+ + 
Sbjct: 240 LEEAKERDHRKLGKELKLFTNSQKVGQGLPLWLPKGATIRRIIERYIVDKEASLGYDHVY 299

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP +  + L++ SGHW+ YR  MF     D+         L+PMNCP H+ V+ + + SY
Sbjct: 300 TPVLGSRELYETSGHWNHYRDGMFPSMEMDN-----EELVLRPMNCPHHMMVYKNDIHSY 354

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+  E  ++ NL + +Y
Sbjct: 355 RELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVY 414

Query: 416 KDFGFEKIMVKLSTR-PE---KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
           KDFG E    +LS R PE   K    D +W+ A+ ++K  +D +       ++     GE
Sbjct: 415 KDFGLENYSFRLSYRDPEDTKKYYADDEMWEKAQGMLKEAMDEMG------LDYYEAEGE 468

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
            AFYGPK +  ++ A+G+D    T+Q+DF LP RF   YV    ++  PV+IHR V  ++
Sbjct: 469 AAFYGPKLDVQVRTALGKDETLSTVQLDFLLPERFELSYVGEDGKQHRPVVIHRGVVSTM 528

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNET 590
           ERF+  +IE +KG  P WL+P+Q  V  ++    ++YA+++ + L+   + +E D R E 
Sbjct: 529 ERFVAFLIEEYKGAFPTWLAPVQVQVIPVSPQVHLDYAKKVQDELRRAGIRVELDTREEK 588

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           I YKIRE  ++KIP +++ GD E +E  + +R++G   ++ ++L
Sbjct: 589 IGYKIREAQMQKIPYMLVVGDNEVTENGVNVRKYGEQKSETIAL 632


>gi|229823243|ref|ZP_04449312.1| hypothetical protein GCWU000282_00541 [Catonella morbi ATCC 51271]
 gi|229787409|gb|EEP23523.1| hypothetical protein GCWU000282_00541 [Catonella morbi ATCC 51271]
          Length = 647

 Score =  511 bits (1315), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 261/651 (40%), Positives = 405/651 (62%), Gaps = 22/651 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           S I LTFPDGS++++    T   VA SI  SLAK  +A    G++ D   P+  +G+IEI
Sbjct: 2   SQIALTFPDGSVRHYDKGVTVDQVAASIGSSLAKATLAGKFQGQLVDHDRPLEADGAIEI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           IT + P +L ++RHS AH+MA A+  ++P +   +GP IE GFYYD DKE   + D+L  
Sbjct: 62  ITDKSPEALEIMRHSTAHLMAHALTRLYPGIHFGVGPAIESGFYYDTDKEVQLTEDDLPA 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +EK+M++II+++ P +++ +S  +A ELF  K + YKVE++  +PA E +T+Y+Q ++ D
Sbjct: 122 VEKEMKKIISQNYPIVRREVSRAEALELF--KHDPYKVELITDLPADEVITVYQQEDFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG HV STG++ K FKL+ +AGAYWRG+S+  M+ R+YGTA+  Q +L ++L   +E+
Sbjct: 180 LCRGIHVPSTGKI-KVFKLLSLAGAYWRGNSDNKMMQRVYGTAFFKQADLDEFLRLRQEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQV 299
           ++RDHRKL +E+ +F ++++ GSG+ FW  KG  I + +  Y M ++I   Y+ + TP +
Sbjct: 239 KERDHRKLGKELGIFMVSKEVGSGLPFWLPKGATIRRVIERYIMDKEISLGYDHVYTPIM 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L+Q SGHW  Y+ +MF        + D     L+PMNCP H+ ++ + + SYRELP
Sbjct: 299 AKVDLYQTSGHWAHYKDDMFPPM----DMGDGEMLVLRPMNCPHHMMIYKNDIHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  T +DAH+F   +Q+  E +++ +LI ++Y DFG
Sbjct: 355 IRIAELGMMHRYEKSGALSGLQRVREMTLNDAHIFVRPDQIKEEFIRVLDLIKAVYHDFG 414

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R     EK    DA+W+ A+ ++K  +D +       ++    +GE AFY
Sbjct: 415 ITDYRFRLSYRDPENKEKYFDDDAMWEKAQAMLKEAMDELG------LDYFEAIGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH-PVMIHRAVFGSIERF 534
           GPK +   K AIG +    TIQ+DF LP RF+  YV    +  H PV+IHR V  ++ERF
Sbjct: 469 GPKLDIQFKTAIGLEETMSTIQLDFLLPERFDLTYVGEDGQDNHRPVVIHRGVVSTMERF 528

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINY 593
           +  +IE +KG  P WL+P+Q  +  ++  A  +  QEI   LK+    ++ D RNE + Y
Sbjct: 529 VAYLIEEYKGAFPTWLAPVQVALLPVSLEAHSDRVQEIYEDLKAKGFRVDMDLRNEKLGY 588

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR     KIP  I+ GD+E SE ++ +R +GS  ++  S  D + +L+++
Sbjct: 589 KIRSAQTAKIPYQIVIGDQEVSEGTVNVRHYGSAKSESYSYDDFVRLLSED 639


>gi|228993303|ref|ZP_04153219.1| Threonyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
 gi|228766371|gb|EEM15014.1| Threonyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
          Length = 643

 Score =  510 bits (1314), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 250/642 (38%), Positives = 399/642 (62%), Gaps = 20/642 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSI 59
           M   +K+ FPDG++K FP   T  ++A SIS  L KKAVA  +N ++ DL  P+ E G++
Sbjct: 1   MADVVKIIFPDGAVKEFPKGTTTEEIAASISPGLKKKAVAGKLNDEMIDLRTPIEEDGAV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +    L ++RHS AH++A+A++ ++ +V++ IGP+IE+GFYYD D E+  + ++ 
Sbjct: 61  SIITLDSEDGLYILRHSTAHLLAQALKRLYKDVKLGIGPVIENGFYYDIDMEEAITVEDF 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IEK+MQ+I+  +   ++  +   +A   +E   +  K+E++  +P    +++Y QGE+
Sbjct: 121 PKIEKEMQKIVNENLEIVRHEVPRAEALRRYEEIGDELKLELINDLPEDAIISIYEQGEF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           +DLCRG H+ STG++ K FKL+ VAGAYWRGDSN  ML RIYGTA+  + EL ++L  LE
Sbjct: 181 YDLCRGVHLPSTGKI-KMFKLLSVAGAYWRGDSNNKMLQRIYGTAFVKKAELDEHLRMLE 239

Query: 240 ESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTP 297
           E+++RDHRKL +E+ LF  ++  G G+  W  KG  I + +  Y+  ++    Y+ + TP
Sbjct: 240 EAKERDHRKLGKELKLFTNSQKVGQGLPLWLPKGATIRRIIERYIVDKEASLGYDHVYTP 299

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +  + L++ SGHW+ YR  MF     D+         L+PMNCP H+ V+ + + SYRE
Sbjct: 300 VLGSRELYETSGHWNHYRDGMFPSMEMDN-----EELVLRPMNCPHHMMVYKNDIHSYRE 354

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+  E  ++ NL + +YKD
Sbjct: 355 LPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVYKD 414

Query: 418 FGFEKIMVKLSTR-PE---KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           FG E    +LS R PE   K    D +W+ A++++K  +D +     +        GE A
Sbjct: 415 FGLENYSFRLSYRDPEDTKKYYADDEMWEKAQSMLKEAMDEMGLEYYE------AEGEAA 468

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  ++ A+G+D    T+Q+DF LP RF   YV    +   PV+IHR V  ++ER
Sbjct: 469 FYGPKLDVQVRTALGKDETLSTVQLDFLLPERFELTYVGEDGKPHRPVVIHRGVVSTMER 528

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETIN 592
           F+  +IE +KG  P WL+P+Q  V  ++    ++YA+++   L+   + +E D R E I 
Sbjct: 529 FVAFLIEEYKGAFPTWLAPVQVQVIPVSPQVHLDYAKKVQEDLQRAGIRVEVDTREEKIG 588

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           YKIRE  ++KIP +++ GD E +E  + +R++G   ++ ++L
Sbjct: 589 YKIREAQMQKIPYMLVVGDNEVAENGVNVRKYGEQKSETIAL 630


>gi|163942310|ref|YP_001647194.1| threonyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|229013779|ref|ZP_04170907.1| Threonyl-tRNA synthetase [Bacillus mycoides DSM 2048]
 gi|229062260|ref|ZP_04199581.1| Threonyl-tRNA synthetase [Bacillus cereus AH603]
 gi|229135411|ref|ZP_04264199.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
 gi|163864507|gb|ABY45566.1| threonyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|228648054|gb|EEL04101.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
 gi|228716988|gb|EEL68669.1| Threonyl-tRNA synthetase [Bacillus cereus AH603]
 gi|228747448|gb|EEL97323.1| Threonyl-tRNA synthetase [Bacillus mycoides DSM 2048]
          Length = 645

 Score =  510 bits (1314), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 251/644 (38%), Positives = 400/644 (62%), Gaps = 22/644 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSI 59
           M   +K+TFPDG++K FP   T  ++A SIS  L KKAVA  +N ++ DL  P+ E G++
Sbjct: 1   MADVVKITFPDGAVKEFPKGVTTEEIAASISPGLKKKAVAGKLNDEMIDLVTPIEEDGAV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEV--QVAIGPIIEDGFYYDFDKEQPFSSD 117
            IIT +    L ++RHS AH++A+A++ ++ +V  ++ IGP+IE+GFYYD D E+  + +
Sbjct: 61  SIITLDSEDGLYILRHSTAHLLAQALKRLYKDVKLELGIGPVIENGFYYDIDMEEAITVE 120

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +  +IEK+MQ+I+  +   ++  +   +A   FE   +  K++++  +P    +++Y QG
Sbjct: 121 DFKKIEKEMQKIVNENLEIVRHEVPRAEALRRFEEIGDELKLDLINDLPEDAVISIYEQG 180

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           E+FDLCRG H+ STG++K  FKL+ VAGAYWRGDSN  ML RIYGT +  + EL ++L  
Sbjct: 181 EFFDLCRGVHLPSTGKIK-VFKLLSVAGAYWRGDSNNKMLQRIYGTGFVKKAELDEHLRM 239

Query: 238 LEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
           LEE+++RDHRKL +E+ LF  ++  G G+  W  KG  I + +  Y+  K     Y+ + 
Sbjct: 240 LEEAKERDHRKLGKELKLFTNSQKVGQGLPLWLPKGATIRRIIERYIVDKEASLGYDHVY 299

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP +  + L++ SGHW+ YR  MF     D+         L+PMNCP H+ V+ + + SY
Sbjct: 300 TPVLGSRELYETSGHWNHYRDGMFPSMEMDN-----EELVLRPMNCPHHMMVYKNDIHSY 354

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+  E  ++ NL + +Y
Sbjct: 355 RELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVY 414

Query: 416 KDFGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
           KDFG E    +LS R     +K    D +W+ A+ ++K  +D +       ++     GE
Sbjct: 415 KDFGLENYSFRLSYRDPADTKKYYADDEMWEKAQGMLKEAMDEMG------LDYYEAEGE 468

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
            AFYGPK +  ++ A+G+D    T+Q+DF LP RF   YV    ++  PV+IHR V  ++
Sbjct: 469 AAFYGPKLDVQVRTALGKDETLSTVQLDFLLPERFELTYVGEDGKQHRPVVIHRGVVSTM 528

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNET 590
           ERF+  +IE +KG  P WL+P+QA V  ++    ++YA+++ + L+   + +E D R E 
Sbjct: 529 ERFVAFLIEEYKGAFPTWLAPVQAQVIPVSPQVHLDYAKKVQDELRRAGIRVELDTREEK 588

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           I YKIRE  ++KIP +++ GD E +E  + +R++G   ++ ++L
Sbjct: 589 IGYKIREAQMQKIPYMLVVGDNEVTENGVNVRKYGEQKSETIAL 632


>gi|313202757|ref|YP_004041414.1| ser-tRNA(thr) hydrolase; threonyL-tRNA synthetase [Paludibacter
           propionicigenes WB4]
 gi|312442073|gb|ADQ78429.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Paludibacter
           propionicigenes WB4]
          Length = 648

 Score =  510 bits (1314), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 263/648 (40%), Positives = 400/648 (61%), Gaps = 19/648 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           IK+TFPDGS++ F    TG  +AESIS  LA++ +A+ +N ++ DL+ P+  + +I++  
Sbjct: 2   IKVTFPDGSVREFAKGITGLQLAESISSRLAQEVLAITVNDEIWDLTRPIETDAAIKLHK 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
            +D  +     HS AH+MAEA+Q ++P ++  IGP IE+GFYYD D  E      +L  I
Sbjct: 62  WDDEEAKHAFWHSSAHLMAEALQELYPGIKFGIGPAIENGFYYDVDPGEVSIKEGDLPVI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E KM E+  R    ++  +S   A + F    E YK E++E++   + +TLY QG + DL
Sbjct: 122 EAKMLELAQRKEAIVRSDISKADALKRFGDIGEVYKTEMIEALEDGK-ITLYTQGNFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ +TG +K   K++ VAGAYWRGD  R ML+R+YG  +  ++ L +YL  LEE++
Sbjct: 181 CRGPHLPNTGDIKAI-KVLSVAGAYWRGDEKRKMLTRLYGITFPKKKMLDEYLVLLEEAK 239

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           KRDHRK+ +E++LF  +E  G G+  W  +G  +   L  ++++ + + DY+++ TP + 
Sbjct: 240 KRDHRKIGKELELFMFSEMVGKGLPMWLPRGTALRLRLEDFLKKIQRRFDYQQVMTPHIG 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ L+  SGH+  Y  + F       T ++   + LKPMNCP H  ++    +SY+ELPV
Sbjct: 300 NKQLYVTSGHYAKYGKDSFQ---PIHTPEEGEEYLLKPMNCPHHCEIYKFKPRSYKELPV 356

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLAEFG+VYR E SG LHGL RVR FTQDDAH+FC  +Q+ +E LK+ ++I  I+    F
Sbjct: 357 RLAEFGTVYRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKDEFLKVMDIIFIIFNALEF 416

Query: 421 EKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           E    ++S R     EK +GSD  W+ AE  +      I+  ++  +   V  GE AFYG
Sbjct: 417 ENFEAQISLRDPNNREKYIGSDENWEKAEQSI------IEACAEKGLKARVETGEAAFYG 470

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK +++++DAIGR WQ GTIQVD+NLP RF   Y    ++K  PVMIHRA FGS+ERF+ 
Sbjct: 471 PKLDFMVRDAIGRKWQLGTIQVDYNLPERFELEYTGEDNQKHRPVMIHRAPFGSMERFVA 530

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           ++IE+  G  PLWL+P Q ++  I+    +YA +IA  + +  + ++ D RNE I  KIR
Sbjct: 531 VLIEHTAGKFPLWLTPDQVVILPISEKFNDYAFQIAKEMNAQDIRVQVDDRNEKIGRKIR 590

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           ++ +K+IP ++I G+KEA    + +RR G      + + D   ++  E
Sbjct: 591 DNELKRIPYMLIVGEKEAENGEVSVRRQGEGDKGTMKVADFSKLILDE 638


>gi|78186013|ref|YP_374056.1| threonyl-tRNA synthetase, class IIA [Chlorobium luteolum DSM 273]
 gi|78165915|gb|ABB23013.1| Ser-tRNA(Thr) hydrolase [Chlorobium luteolum DSM 273]
          Length = 677

 Score =  510 bits (1314), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 261/649 (40%), Positives = 404/649 (62%), Gaps = 16/649 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           + +T PDG+IK FP  +TG D+A SI R LA  A+AV I+GK  DLS P+  + ++ IIT
Sbjct: 31  LSITLPDGTIKLFPKGSTGLDIALSIGRRLADAALAVMIDGKAADLSMPIGMDCTLSIIT 90

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +      V  HS +HIMA AV+ ++P  +   GP +E GFYYD      F+ D+L  IE
Sbjct: 91  FDSAEGHEVFWHSASHIMASAVEELFPGARFGAGPAVEQGFYYDIASSHRFNEDDLRSIE 150

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFES-KKEAYKVEILE-SIPAKENVTLYRQGEWFD 181
           KKM EI  RD+P +++ ++ E A E F++ +++ YKVEILE ++     V+LY +G + D
Sbjct: 151 KKMLEIAGRDTPIVREEMTREAAIEFFKTVRRDPYKVEILEDTLKNVPTVSLYHEGGFTD 210

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LC GPH+ ST ++K   +L  ++ ++WRGDS+R  + RIYG A+ +++ L ++L  LEE+
Sbjct: 211 LCTGPHLPSTSRLKAV-RLFNISSSFWRGDSSRESMQRIYGIAFPSEKLLKEHLERLEEA 269

Query: 242 EKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQV 299
            KRDHR+L +E+ LF ++ E GSG+  W  KG  I Q L ++++  + +  Y  + TP +
Sbjct: 270 RKRDHRRLGQELKLFMLSPEIGSGLPVWLPKGAIIRQELETFLKDEQRRRGYLPVYTPHI 329

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +  L+++SGH+  Y  + F      D       + LKPMNCP H  +++  ++SYR+LP
Sbjct: 330 GNIELYKRSGHYPYYSDSQFPPLTYHDEDGKQEQYLLKPMNCPHHHLIYSSEMRSYRDLP 389

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +RL EFG+VYR+E SG L+GL+R RGFTQDD+H++C  +Q+ +E     +L   +++  G
Sbjct: 390 IRLTEFGTVYRHEQSGELNGLVRARGFTQDDSHIYCRPDQLVDEICNAIDLTQFVFRTLG 449

Query: 420 FEKIMVKLSTR-PEKRV---GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           F+ +  +LS   PE +    G+  +W+ AE  +K   D +       I   + +GE +FY
Sbjct: 450 FDAVETRLSMHDPENQTKYGGTPEVWEQAEKDVKEAADRMG------IKYFIGIGEASFY 503

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++I++DA+GR WQ GT+QVD+ +P RF+  YV +  +K  PV+IHRA FGS+ERFI
Sbjct: 504 GPKIDFIVRDALGRKWQLGTVQVDYVMPERFDLTYVGNDGQKHRPVVIHRAPFGSMERFI 563

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
           G++IE+  GN PLWL+P+QA+V  I     +YA  + N + +  +  E D R+E I  KI
Sbjct: 564 GVLIEHTAGNFPLWLAPVQAVVLPIAEDVHDYAAGVRNAMLAAGIRTELDLRSEKIGKKI 623

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           RE  + KIP +++ G KE  + ++ +RR        +S+ D I  L +E
Sbjct: 624 RESELSKIPYMVVVGQKEEEKGAVSLRRHRKGDEGTLSIQDMIERLREE 672


>gi|229032221|ref|ZP_04188194.1| Threonyl-tRNA synthetase [Bacillus cereus AH1271]
 gi|229076078|ref|ZP_04209046.1| Threonyl-tRNA synthetase [Bacillus cereus Rock4-18]
 gi|229105203|ref|ZP_04235852.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-28]
 gi|228678129|gb|EEL32357.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-28]
 gi|228706941|gb|EEL59146.1| Threonyl-tRNA synthetase [Bacillus cereus Rock4-18]
 gi|228729001|gb|EEL80004.1| Threonyl-tRNA synthetase [Bacillus cereus AH1271]
          Length = 645

 Score =  510 bits (1314), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 250/644 (38%), Positives = 402/644 (62%), Gaps = 22/644 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSI 59
           M   +K+TFPDG++K FP   T  ++A SIS  L KKAVA  +N ++ DL  P+ E G++
Sbjct: 1   MADVVKITFPDGAVKEFPKGVTTEEIAASISPGLKKKAVAGKLNDEMIDLVTPIEEDGAV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE--VQVAIGPIIEDGFYYDFDKEQPFSSD 117
            IIT +    L ++RHS AH++A+A++ ++ +  +++ IGP+IE+GFYYD D E+  + +
Sbjct: 61  SIITLDSEDGLYILRHSTAHLLAQALKRLYKDAKLELGIGPVIENGFYYDIDMEEAITVE 120

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +  +IEK+MQ+I+  +   ++  +   +A   FE   +  K++++  +P    +++Y QG
Sbjct: 121 DFKKIEKEMQKIVNENLEIVRHEVPRAEALRRFEEIGDELKLDLINDLPEDAVISIYEQG 180

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           E+FDLCRG H+ STG++K  FKL+ VAGAYWRGDSN  ML RIYGTA+  + EL ++L  
Sbjct: 181 EFFDLCRGVHLPSTGKIK-VFKLLSVAGAYWRGDSNNKMLQRIYGTAFVKKAELDEHLRM 239

Query: 238 LEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEIN 295
           LEE+++RDHRKL +E+ LF  ++  G G+  W  KG  I + +  Y+  ++    Y+ + 
Sbjct: 240 LEEAKERDHRKLGKELKLFTNSQKVGQGLPLWLPKGATIRRIIERYIVDKEASLGYDHVY 299

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP +  + L++ SGHW+ YR  MF     D+         L+PMNCP H+ V+ + + SY
Sbjct: 300 TPVLGSRELYETSGHWNHYRDGMFPSMEMDN-----EELVLRPMNCPHHMMVYKNDIHSY 354

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+  E  ++ NL + +Y
Sbjct: 355 RELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVY 414

Query: 416 KDFGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
           KDFG E    +LS R     +K    D +W+ A+ ++K  +D +       ++     GE
Sbjct: 415 KDFGLENYSFRLSYRDPADTKKYYADDEMWEKAQGMLKEAMDEMG------LDYYEAEGE 468

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
            AFYGPK +  ++ A+G+D    T+Q+DF LP RF   YV    ++  PV+IHR V  ++
Sbjct: 469 AAFYGPKLDVQVRTALGKDETLSTVQLDFLLPERFELAYVGEDGKQHRPVVIHRGVVSTM 528

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNET 590
           ERF+  +IE +KG  P WL+P+QA V  ++    ++YA+++ + L+   + +E D R E 
Sbjct: 529 ERFVAFLIEEYKGAFPTWLAPVQAQVIPVSPQVHLDYAKKVQDELRRAGIRVELDTREEK 588

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           I YKIRE  ++KIP +++ GD E +E  + +R++G   ++ ++L
Sbjct: 589 IGYKIREAQMQKIPYMLVVGDNEVTENGVNVRKYGEQKSETIAL 632


>gi|229169303|ref|ZP_04297013.1| Threonyl-tRNA synthetase [Bacillus cereus AH621]
 gi|228614066|gb|EEK71181.1| Threonyl-tRNA synthetase [Bacillus cereus AH621]
          Length = 645

 Score =  510 bits (1314), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 251/644 (38%), Positives = 400/644 (62%), Gaps = 22/644 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSI 59
           M   +K+TFPDG++K FP   T  ++A SIS  L KKAVA  +N ++ DL  P+ E G++
Sbjct: 1   MADVVKITFPDGAVKEFPKGVTTEEIAASISPGLKKKAVAGKLNDEMIDLVTPIEEDGAV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEV--QVAIGPIIEDGFYYDFDKEQPFSSD 117
            IIT +    L ++RHS AH++A+A++ ++ +V  ++ IGP+IE+GFYYD D E+  + +
Sbjct: 61  SIITLDSEDGLYILRHSTAHLLAQALKRLYKDVKLELGIGPVIENGFYYDIDMEEAITVE 120

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +  +IEK+MQ+I+  +   ++  +   +A   FE   +  K++++  +P    +++Y QG
Sbjct: 121 DFKKIEKEMQKIVNENLEIVRHEVPRTEALRRFEEIGDELKLDLINDLPEDAVISIYEQG 180

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           E+FDLCRG H+ STG++K  FKL+ VAGAYWRGDSN  ML RIYGT +  + EL ++L  
Sbjct: 181 EFFDLCRGVHLPSTGKIK-VFKLLSVAGAYWRGDSNNKMLQRIYGTGFVKKAELDEHLRM 239

Query: 238 LEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
           LEE+++RDHRKL +E+ LF  ++  G G+  W  KG  I + +  Y+  K     Y+ + 
Sbjct: 240 LEEAKERDHRKLGKELKLFTNSQKVGQGLPLWLPKGATIRRIIERYIVDKEASLGYDHVY 299

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP +  + L++ SGHW+ YR  MF     D+         L+PMNCP H+ V+ + + SY
Sbjct: 300 TPVLGSRELYETSGHWNHYRDGMFPSMEMDN-----EELVLRPMNCPHHMMVYKNDIHSY 354

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+  E  ++ NL + +Y
Sbjct: 355 RELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVY 414

Query: 416 KDFGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
           KDFG E    +LS R     +K    D +W+ A+ ++K  +D +       ++     GE
Sbjct: 415 KDFGLENYSFRLSYRDPADTKKYYADDEMWEKAQGMLKEAMDEMG------LDYYEAEGE 468

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
            AFYGPK +  ++ A+G+D    T+Q+DF LP RF   YV    ++  PV+IHR V  ++
Sbjct: 469 AAFYGPKLDVQVRTALGKDETLSTVQLDFLLPERFELTYVGEDGKQHRPVVIHRGVVSTM 528

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNET 590
           ERF+  +IE +KG  P WL+P+QA V  ++    ++YA+++ + L+   + +E D R E 
Sbjct: 529 ERFVAFLIEEYKGAFPTWLAPVQAQVIPVSPQVHLDYAKKVQDELRRAGIRVELDTREEK 588

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           I YKIRE  ++KIP +++ GD E +E  + +R++G   ++ ++L
Sbjct: 589 IGYKIREAQMQKIPYMLVVGDNEVTENGVNVRKYGEQKSETIAL 632


>gi|228941754|ref|ZP_04104301.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228974678|ref|ZP_04135244.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228981272|ref|ZP_04141572.1| Threonyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228778472|gb|EEM26739.1| Threonyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228785081|gb|EEM33094.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228817966|gb|EEM64044.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|326942359|gb|AEA18255.1| threonyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 645

 Score =  510 bits (1314), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 250/644 (38%), Positives = 401/644 (62%), Gaps = 22/644 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSI 59
           M   +K+TFPDG++K FP   T  ++A SIS  L KKAVA  +N ++ DL  P+ E G++
Sbjct: 1   MADVVKITFPDGAVKEFPKGVTTEEIAASISPGLKKKAVAGKLNDEMIDLVTPIEEDGAV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEV--QVAIGPIIEDGFYYDFDKEQPFSSD 117
            IIT +    L ++RHS AH++A+A++ ++ +V  ++ IGP+IE+GFYYD D E+  + +
Sbjct: 61  SIITLDSEDGLYILRHSTAHVLAQALKRLYKDVKLELGIGPVIENGFYYDIDMEEAITVE 120

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +  +IEK+MQ+I+  +   ++  +   +A   FE   +  K++++  +P    +++Y QG
Sbjct: 121 DFKKIEKEMQKIVNENLEIVRHEVPRAEALRRFEEIGDELKLDLINDLPEDAVISIYEQG 180

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           E+FDLCRG H+ STG++K  FKL+ VAGAYWRGDSN  ML RIYGTA+  + EL ++L  
Sbjct: 181 EFFDLCRGVHLPSTGKIK-VFKLLSVAGAYWRGDSNNKMLQRIYGTAFVKKAELDEHLRM 239

Query: 238 LEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEIN 295
           LEE+++RDHRKL +E+ LF  ++  G G+  W  KG  I + +  Y+  ++    Y+ + 
Sbjct: 240 LEEAKERDHRKLGKELKLFTNSQKVGQGLPLWLPKGATIRRIIERYIVDKEASLGYDHVY 299

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP +  + L++ SGHW+ YR  MF     D+         L+PMNCP H+ V+ + + SY
Sbjct: 300 TPVLGSRELYETSGHWNHYRDGMFPSMEMDN-----EELVLRPMNCPHHMMVYKNDIHSY 354

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+  E  ++ NL + +Y
Sbjct: 355 RELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVY 414

Query: 416 KDFGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
           KDFG E    +LS R     +K    D +W+ A+ ++K  +D +       ++     GE
Sbjct: 415 KDFGLENYSFRLSYRDPADTKKYYADDEMWEKAQGMLKEAMDEMG------LDYYEAEGE 468

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
            AFYGPK +  ++ A+G+D    T+Q+DF LP RF   YV    ++  PV+IHR V  ++
Sbjct: 469 AAFYGPKLDVQVRTALGKDETLSTVQLDFLLPERFELTYVGEDGKQHRPVVIHRGVVSTM 528

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNET 590
           ERF+  +IE +KG  P WL+P+Q  V  ++    ++YA+++ + L+   + +E D R E 
Sbjct: 529 ERFVAFLIEEYKGAFPTWLAPVQVQVIPVSPQVHLDYAKKVQDELRRAGIRVELDTREEK 588

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           I YKIRE  ++KIP +++ GD E +E  + +R++G   ++ ++L
Sbjct: 589 IGYKIREAQMQKIPYMLVVGDNEVTENGVNVRKYGEQKSETIAL 632


>gi|217962055|ref|YP_002340625.1| threonyl-tRNA synthetase [Bacillus cereus AH187]
 gi|222098038|ref|YP_002532095.1| threonyl-tRNA synthetase [Bacillus cereus Q1]
 gi|229141301|ref|ZP_04269839.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
 gi|217064460|gb|ACJ78710.1| threonyl-tRNA synthetase [Bacillus cereus AH187]
 gi|221242096|gb|ACM14806.1| threonyl-tRNA synthetase [Bacillus cereus Q1]
 gi|228642082|gb|EEK98375.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
          Length = 645

 Score =  510 bits (1314), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 251/644 (38%), Positives = 401/644 (62%), Gaps = 22/644 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSI 59
           M   +K+TFPDG++K FP   T  ++A SIS  L KKAVA  +N ++ DL  P+ E G++
Sbjct: 1   MADVVKITFPDGAVKEFPKGVTTEEIAASISPGLKKKAVAGKLNDEMIDLVTPIEEDGAV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV--AIGPIIEDGFYYDFDKEQPFSSD 117
            IIT +    L ++RHS AH++A+A++ ++ +V+V   IGP+IE+GFYYD D E+  + +
Sbjct: 61  SIITLDSEDGLYILRHSTAHLLAQALKRLYKDVKVELGIGPVIENGFYYDIDMEEAITVE 120

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +  +IEK+MQ+I+  +   ++  +   +A   FE   +  K++++  +P    +++Y QG
Sbjct: 121 DFKKIEKEMQKIVNENLEIVRHEVPRAEAIRRFEEIGDELKLDLINDLPEDAVISIYEQG 180

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           E+FDLCRG H+ STG++K  FKL+ VAGAYWRGDSN  ML RIYGTA+  + EL ++L  
Sbjct: 181 EFFDLCRGVHLPSTGKIK-VFKLLSVAGAYWRGDSNNKMLQRIYGTAFVKKAELDEHLRM 239

Query: 238 LEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEIN 295
           LEE+++RDHRKL +E+ LF  ++  G G+  W  KG  I + +  Y+  ++    Y+ + 
Sbjct: 240 LEEAKERDHRKLGKELKLFTNSQKVGQGLPLWLPKGATIRRIIERYIVDKEASLGYDHVY 299

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP +  + L++ SGHW+ YR  MF     D+         L+PMNCP H+ V+ + + SY
Sbjct: 300 TPVLGSRELYETSGHWNHYRDGMFPSMEMDN-----EELVLRPMNCPHHMMVYKNDIHSY 354

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+  E  ++ NL + +Y
Sbjct: 355 RELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVY 414

Query: 416 KDFGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
           KDFG E    +LS R     +K    D +W+ A+ ++K  +D +       ++     GE
Sbjct: 415 KDFGLENYSFRLSYRDPADTKKYYADDEMWEKAQGMLKEAMDEMG------LDYYEAEGE 468

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
            AFYGPK +  ++ A+G+D    T+Q+DF LP RF   YV    ++  PV+IHR V  ++
Sbjct: 469 AAFYGPKLDVQVRTALGKDETLSTVQLDFLLPERFELSYVGEDGKQHRPVVIHRGVVSTM 528

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNET 590
           ERF+  +IE +KG  P WL+P+Q  V  ++    ++YA+++ + L+   + +E D R E 
Sbjct: 529 ERFVAFLIEEYKGAFPTWLAPVQVQVIPVSPQVHLDYAKKVQDELRRAGMRVELDTREEK 588

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           I YKIRE  ++KIP +++ GD E +E  + +R++G   ++ ++L
Sbjct: 589 IGYKIREAQMQKIPYMLVVGDNEVTENGVNVRKYGEQKSETIAL 632


>gi|42783753|ref|NP_981000.1| threonyl-tRNA synthetase [Bacillus cereus ATCC 10987]
 gi|206969938|ref|ZP_03230892.1| threonyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|218234238|ref|YP_002369371.1| threonyl-tRNA synthetase [Bacillus cereus B4264]
 gi|228923319|ref|ZP_04086607.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228954844|ref|ZP_04116864.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228960844|ref|ZP_04122479.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|229048283|ref|ZP_04193851.1| Threonyl-tRNA synthetase [Bacillus cereus AH676]
 gi|229072077|ref|ZP_04205286.1| Threonyl-tRNA synthetase [Bacillus cereus F65185]
 gi|229081828|ref|ZP_04214320.1| Threonyl-tRNA synthetase [Bacillus cereus Rock4-2]
 gi|229112040|ref|ZP_04241583.1| Threonyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|229129859|ref|ZP_04258825.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|229147134|ref|ZP_04275493.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|229152770|ref|ZP_04280953.1| Threonyl-tRNA synthetase [Bacillus cereus m1550]
 gi|229180894|ref|ZP_04308229.1| Threonyl-tRNA synthetase [Bacillus cereus 172560W]
 gi|229192776|ref|ZP_04319734.1| Threonyl-tRNA synthetase [Bacillus cereus ATCC 10876]
 gi|229198724|ref|ZP_04325422.1| Threonyl-tRNA synthetase [Bacillus cereus m1293]
 gi|296505048|ref|YP_003666748.1| threonyl-tRNA synthetase [Bacillus thuringiensis BMB171]
 gi|42739683|gb|AAS43608.1| threonyl-tRNA synthetase [Bacillus cereus ATCC 10987]
 gi|206735626|gb|EDZ52794.1| threonyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|218162195|gb|ACK62187.1| threonine--tRNA ligase [Bacillus cereus B4264]
 gi|228584746|gb|EEK42866.1| Threonyl-tRNA synthetase [Bacillus cereus m1293]
 gi|228590615|gb|EEK48476.1| Threonyl-tRNA synthetase [Bacillus cereus ATCC 10876]
 gi|228602451|gb|EEK59937.1| Threonyl-tRNA synthetase [Bacillus cereus 172560W]
 gi|228630590|gb|EEK87236.1| Threonyl-tRNA synthetase [Bacillus cereus m1550]
 gi|228636383|gb|EEK92854.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|228653550|gb|EEL09422.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|228671363|gb|EEL26664.1| Threonyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|228701416|gb|EEL53910.1| Threonyl-tRNA synthetase [Bacillus cereus Rock4-2]
 gi|228711011|gb|EEL62977.1| Threonyl-tRNA synthetase [Bacillus cereus F65185]
 gi|228723008|gb|EEL74385.1| Threonyl-tRNA synthetase [Bacillus cereus AH676]
 gi|228798866|gb|EEM45845.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228804833|gb|EEM51432.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228836273|gb|EEM81626.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|296326100|gb|ADH09028.1| threonyl-tRNA synthetase [Bacillus thuringiensis BMB171]
 gi|324328469|gb|ADY23729.1| threonyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 645

 Score =  510 bits (1313), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 251/644 (38%), Positives = 401/644 (62%), Gaps = 22/644 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSI 59
           M   +K+TFPDG++K FP   T  ++A SIS  L KKAVA  +N ++ DL  P+ E G++
Sbjct: 1   MADVVKITFPDGAVKEFPKGVTTEEIAASISPGLKKKAVAGKLNDEMIDLVTPIEEDGAV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV--AIGPIIEDGFYYDFDKEQPFSSD 117
            IIT +    L ++RHS AH++A+A++ ++ +V+V   IGP+IE+GFYYD D E+  + +
Sbjct: 61  SIITLDSEDGLYILRHSTAHLLAQALKRLYKDVKVELGIGPVIENGFYYDIDMEEAITVE 120

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +  +IEK+MQ+I+  +   ++  +   +A   FE   +  K++++  +P    +++Y QG
Sbjct: 121 DFKKIEKEMQKIVNENLEIVRHEVPRAEAIRRFEEIGDELKLDLINDLPEDAVISIYEQG 180

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           E+FDLCRG H+ STG++K  FKL+ VAGAYWRGDSN  ML RIYGTA+  + EL ++L  
Sbjct: 181 EFFDLCRGVHLPSTGKIK-VFKLLSVAGAYWRGDSNNKMLQRIYGTAFVKKAELDEHLRM 239

Query: 238 LEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEIN 295
           LEE+++RDHRKL +E+ LF  ++  G G+  W  KG  I + +  Y+  ++    Y+ + 
Sbjct: 240 LEEAKERDHRKLGKELKLFTNSQKVGQGLPLWLPKGATIRRIIERYIVDKEASLGYDHVY 299

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP +  + L++ SGHW+ YR  MF     D+         L+PMNCP H+ V+ + + SY
Sbjct: 300 TPVLGSRELYETSGHWNHYRDGMFPSMEMDN-----EELVLRPMNCPHHMMVYKNDIHSY 354

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+  E  ++ NL + +Y
Sbjct: 355 RELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVY 414

Query: 416 KDFGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
           KDFG E    +LS R     +K    D +W+ A+ ++K  +D +       ++     GE
Sbjct: 415 KDFGLENYSFRLSYRDPADTKKYYADDEMWEKAQGMLKEAMDEMG------LDYYEAEGE 468

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
            AFYGPK +  ++ A+G+D    T+Q+DF LP RF   YV    ++  PV+IHR V  ++
Sbjct: 469 AAFYGPKLDVQVRTALGKDETLSTVQLDFLLPERFELSYVGEDGKQHRPVVIHRGVVSTM 528

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNET 590
           ERF+  +IE +KG  P WL+P+Q  V  ++    ++YA+++ + L+   + +E D R E 
Sbjct: 529 ERFVAFLIEEYKGAFPTWLAPVQVQVIPVSPQVHLDYAKKVQDELRRAGIRVELDTREEK 588

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           I YKIRE  ++KIP +++ GD E +E  + +R++G   ++ ++L
Sbjct: 589 IGYKIREAQMQKIPYMLVVGDNEVTENGVNVRKYGEQKSETIAL 632


>gi|228967672|ref|ZP_04128693.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228792048|gb|EEM39629.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str.
           T04001]
          Length = 645

 Score =  510 bits (1313), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 250/644 (38%), Positives = 401/644 (62%), Gaps = 22/644 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSI 59
           M   +K+TFPDG++K FP   T  ++A SIS  L KKAVA  +N ++ DL  P+ E G++
Sbjct: 1   MADVVKITFPDGAVKEFPKGVTTEEIAASISPGLKKKAVAGKLNDEMIDLVTPIEEDGAV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEV--QVAIGPIIEDGFYYDFDKEQPFSSD 117
            IIT +    L ++RHS AH++A+A++ ++ +V  ++ IGP+IE+GFYYD D E+  + +
Sbjct: 61  SIITLDSEDGLYILRHSTAHLLAQALKRLYKDVKLELGIGPVIENGFYYDIDMEEAITVE 120

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +  +IEK+MQ+I+  +   ++  +   +A   FE   +  K++++  +P    +++Y QG
Sbjct: 121 DFKKIEKEMQKIVNENLEIVRHEVPRAEALRRFEEISDELKLDLINDLPEDAVISIYEQG 180

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           E+FDLCRG H+ STG++K  FKL+ VAGAYWRGDSN  ML RIYGTA+  + EL ++L  
Sbjct: 181 EFFDLCRGVHLPSTGKIK-VFKLLSVAGAYWRGDSNNKMLQRIYGTAFVKKAELDEHLRM 239

Query: 238 LEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEIN 295
           LEE+++RDHRKL +E+ LF  ++  G G+  W  KG  I + +  Y+  ++    Y+ + 
Sbjct: 240 LEEAKERDHRKLGKELKLFTNSQKVGQGLPLWLPKGATIRRIIERYIVDKEASLGYDHVY 299

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP +  + L++ SGHW+ YR  MF     D+         L+PMNCP H+ V+ + + SY
Sbjct: 300 TPVLGSRELYETSGHWNHYRDGMFPSMEMDN-----EELVLRPMNCPHHMMVYKNDIHSY 354

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+  E  ++ NL + +Y
Sbjct: 355 RELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVY 414

Query: 416 KDFGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
           KDFG E    +LS R     +K    D +W+ A+ ++K  +D +       ++     GE
Sbjct: 415 KDFGLENYSFRLSYRDPADTKKYYADDEMWEKAQGMLKEAMDEMG------LDYYEAEGE 468

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
            AFYGPK +  ++ A+G+D    T+Q+DF LP RF   YV    ++  PV+IHR V  ++
Sbjct: 469 AAFYGPKLDVQVRTALGKDETLSTVQLDFLLPERFELTYVGEDGKQHRPVVIHRGVVSTM 528

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNET 590
           ERF+  +IE +KG  P WL+P+Q  V  ++    ++YA+++ + L+   + +E D R E 
Sbjct: 529 ERFVAFLIEEYKGAFPTWLAPVQVQVIPVSPQVHLDYAKKVQDELRRAGIRVELDTREEK 588

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           I YKIRE  ++KIP +++ GD E +E  + +R++G   ++ ++L
Sbjct: 589 IGYKIREAQMQKIPYMLVVGDNEVTENGVNVRKYGEQKSETIAL 632


>gi|149276293|ref|ZP_01882437.1| threonine--tRNA ligase (threonine tRNA synthetase) [Pedobacter sp.
           BAL39]
 gi|149232813|gb|EDM38188.1| threonine--tRNA ligase (threonine tRNA synthetase) [Pedobacter sp.
           BAL39]
          Length = 641

 Score =  510 bits (1313), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 271/648 (41%), Positives = 402/648 (62%), Gaps = 19/648 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           I +T PDGS + +    T   +A SIS  LA+  +A  +NG++ D S  +  + S++++T
Sbjct: 2   INITLPDGSSRQYEQGTTAHQIALSISEGLARNVLAAEVNGEIWDSSRAINADASVKLLT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQI 122
             D    +   HS AHIMAEA+++++P  +  IGP IE GFYYD D  ++ FSSD+   I
Sbjct: 62  WNDAAGKSTFWHSSAHIMAEALEALYPGTKFGIGPAIETGFYYDVDFGDREFSSDDFKAI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E K+ E+  +   F ++ +S   A + F  K + YK+++LE +     +T Y QGE+ DL
Sbjct: 122 ETKILELAKQKEVFERKDISKADAIQYFTEKGDEYKLDLLEGL-EDGKITFYSQGEFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ +TG VK   KLM VAGAYWRGD  R  L+RIYG  +    ELT+YL+ +EE++
Sbjct: 181 CRGPHIPNTGFVKAV-KLMNVAGAYWRGDETRKQLTRIYGVTFPKASELTEYLHMIEEAK 239

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           KRDHRKL +E++LF  +E  G G+  W  KG  + + L+ ++ R + K  YE++ TP + 
Sbjct: 240 KRDHRKLGKELELFAFSEKVGMGLPLWLPKGAALRERLVQFLTRAQAKSGYEQVVTPHIG 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            ++L+  SGH++ Y  + F       T ++   F LKPMNCP H  ++    +SY++LP+
Sbjct: 300 HKNLYITSGHYEKYGKDSFQ---PIKTPQEGEEFFLKPMNCPHHCEIYKVKPRSYKDLPL 356

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R AEFG+VYR E SG LHGL RVRGFTQDDAH+FC  +Q+  E  K+ +L++ ++K  GF
Sbjct: 357 RFAEFGTVYRYEQSGELHGLTRVRGFTQDDAHLFCRPDQVKEEFKKVIDLVLYVFKSLGF 416

Query: 421 EKIMVKLSTR-PE---KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
              + ++S R P+   K +GSD      EN        I+ +++  + T V  GE AFYG
Sbjct: 417 NDYIAQVSLRDPDNKAKYIGSD------ENWQLAESAIIEAAAEKGLPTVVEYGEAAFYG 470

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK ++++KDA+GR WQ GTIQVD+NLP RF   Y  S + K  PVMIHRA FGS+ERFI 
Sbjct: 471 PKLDFMVKDALGRKWQLGTIQVDYNLPERFELEYTGSDNLKHRPVMIHRAPFGSLERFIA 530

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           ++IE+  GN PLWLSP Q I+  I+    +YA+++++ L +  +    DFR+E I  KIR
Sbjct: 531 VLIEHCAGNFPLWLSPEQFIILPISEKYEDYAKKVSDELNNSDIRGLIDFRDEKIGRKIR 590

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  +KKIP ++I G+KE +E  + +R+ G      ++  +   +L KE
Sbjct: 591 DAEVKKIPYMLIIGEKEMAEGKVSVRKHGEGDLGAMTQQEFSELLIKE 638


>gi|30022651|ref|NP_834282.1| threonyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|29898209|gb|AAP11483.1| Threonyl-tRNA synthetase [Bacillus cereus ATCC 14579]
          Length = 646

 Score =  510 bits (1313), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 251/644 (38%), Positives = 401/644 (62%), Gaps = 22/644 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSI 59
           M   +K+TFPDG++K FP   T  ++A SIS  L KKAVA  +N ++ DL  P+ E G++
Sbjct: 2   MADVVKITFPDGAVKEFPKGVTTEEIAASISPGLKKKAVAGKLNDEMIDLVTPIEEDGAV 61

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV--AIGPIIEDGFYYDFDKEQPFSSD 117
            IIT +    L ++RHS AH++A+A++ ++ +V+V   IGP+IE+GFYYD D E+  + +
Sbjct: 62  SIITLDSEDGLYILRHSTAHLLAQALKRLYKDVKVELGIGPVIENGFYYDIDMEEAITVE 121

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +  +IEK+MQ+I+  +   ++  +   +A   FE   +  K++++  +P    +++Y QG
Sbjct: 122 DFKKIEKEMQKIVNENLEIVRHEVPRAEAIRRFEEIGDELKLDLINDLPEDAVISIYEQG 181

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           E+FDLCRG H+ STG++K  FKL+ VAGAYWRGDSN  ML RIYGTA+  + EL ++L  
Sbjct: 182 EFFDLCRGVHLPSTGKIK-VFKLLSVAGAYWRGDSNNKMLQRIYGTAFVKKAELDEHLRM 240

Query: 238 LEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEIN 295
           LEE+++RDHRKL +E+ LF  ++  G G+  W  KG  I + +  Y+  ++    Y+ + 
Sbjct: 241 LEEAKERDHRKLGKELKLFTNSQKVGQGLPLWLPKGATIRRIIERYIVDKEASLGYDHVY 300

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP +  + L++ SGHW+ YR  MF     D+         L+PMNCP H+ V+ + + SY
Sbjct: 301 TPVLGSRELYETSGHWNHYRDGMFPSMEMDN-----EELVLRPMNCPHHMMVYKNDIHSY 355

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+  E  ++ NL + +Y
Sbjct: 356 RELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVY 415

Query: 416 KDFGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
           KDFG E    +LS R     +K    D +W+ A+ ++K  +D +       ++     GE
Sbjct: 416 KDFGLENYSFRLSYRDPADTKKYYADDEMWEKAQGMLKEAMDEMG------LDYYEAEGE 469

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
            AFYGPK +  ++ A+G+D    T+Q+DF LP RF   YV    ++  PV+IHR V  ++
Sbjct: 470 AAFYGPKLDVQVRTALGKDETLSTVQLDFLLPERFELSYVGEDGKQHRPVVIHRGVVSTM 529

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNET 590
           ERF+  +IE +KG  P WL+P+Q  V  ++    ++YA+++ + L+   + +E D R E 
Sbjct: 530 ERFVAFLIEEYKGAFPTWLAPVQVQVIPVSPQVHLDYAKKVQDELRRAGIRVELDTREEK 589

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           I YKIRE  ++KIP +++ GD E +E  + +R++G   ++ ++L
Sbjct: 590 IGYKIREAQMQKIPYMLVVGDNEVTENGVNVRKYGEQKSETIAL 633


>gi|229175285|ref|ZP_04302800.1| Threonyl-tRNA synthetase [Bacillus cereus MM3]
 gi|228608117|gb|EEK65424.1| Threonyl-tRNA synthetase [Bacillus cereus MM3]
          Length = 645

 Score =  510 bits (1313), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 250/644 (38%), Positives = 402/644 (62%), Gaps = 22/644 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSI 59
           M   +K+TFPDG++K FP   T  ++A SIS  L KKAVA  +N ++ DL  P+ E G++
Sbjct: 1   MADVVKITFPDGAVKEFPKGVTTEEIAASISPGLKKKAVAGKLNDEMIDLVTPIEEDGAV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE--VQVAIGPIIEDGFYYDFDKEQPFSSD 117
            IIT +    L ++RHS AH++A+A++ ++ +  +++ IGP+IE+GFYYD D E+  + +
Sbjct: 61  SIITLDSEDGLYILRHSTAHLLAQALKRLYKDAKLELGIGPVIENGFYYDIDMEEAITVE 120

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +  +IEK+MQ+I+  +   ++  +   +A   FE   +  K++++  +P    +++Y QG
Sbjct: 121 DFKKIEKEMQKIVNENLEIVRHEVPRAEALRRFEEIGDELKLDLINDLPEDAVISIYEQG 180

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           E+FDLCRG H+ STG++K  FKL+ VAGAYWRGDSN  ML RIYGTA+  + EL ++L  
Sbjct: 181 EFFDLCRGVHLPSTGKIK-VFKLLSVAGAYWRGDSNNKMLQRIYGTAFVKKAELDEHLRM 239

Query: 238 LEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEIN 295
           LEE+++RDHRKL +E+ LF  ++  G G+  W  KG  I + +  Y+  ++    Y+ + 
Sbjct: 240 LEEAKERDHRKLGKELKLFTNSQKVGQGLPLWLPKGATIRRIIERYIVDKEASLGYDHVY 299

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP +  + L++ SGHW+ YR  MF     D+         L+PMNCP H+ V+ + + SY
Sbjct: 300 TPVLGSRELYETSGHWNHYRDGMFPSMEMDN-----EELVLRPMNCPHHMMVYKNDIHSY 354

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+  E  ++ NL + +Y
Sbjct: 355 RELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVY 414

Query: 416 KDFGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
           KDFG E    +LS R     +K    D +W+ A+ ++K  +D +       ++     GE
Sbjct: 415 KDFGLENYSFRLSYRDPADTKKYYADDEMWEKAQGMLKEAMDEMG------LDYYEAEGE 468

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
            AFYGPK +  ++ A+G+D    T+Q+DF LP RF   YV    ++  PV+IHR V  ++
Sbjct: 469 AAFYGPKLDVQVRTALGKDETLSTVQLDFLLPERFELSYVGEDGKQHRPVVIHRGVVSTM 528

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNET 590
           ERF+  +IE +KG  P WL+P+QA V  ++    ++YA+++ + L+   + +E D R E 
Sbjct: 529 ERFVAFLIEEYKGAFPTWLAPVQAQVIPVSPQVHLDYAKKVQDELRRAGIRVELDTREEK 588

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           I YKIRE  ++KIP +++ GD E +E  + +R++G   ++ ++L
Sbjct: 589 IGYKIREAQMQKIPYMLVVGDNEVTENGVNVRKYGEQKSETIAL 632


>gi|218899729|ref|YP_002448140.1| threonyl-tRNA synthetase [Bacillus cereus G9842]
 gi|228903093|ref|ZP_04067229.1| Threonyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
 gi|228910399|ref|ZP_04074214.1| Threonyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
 gi|218543438|gb|ACK95832.1| threonyl-tRNA synthetase [Bacillus cereus G9842]
 gi|228849165|gb|EEM94004.1| Threonyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
 gi|228856502|gb|EEN01026.1| Threonyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
          Length = 645

 Score =  509 bits (1312), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 250/644 (38%), Positives = 401/644 (62%), Gaps = 22/644 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSI 59
           M   +K+TFPDG++K FP   T  ++A SIS  L KKAVA  +N ++ DL  P+ E G++
Sbjct: 1   MADVVKITFPDGAVKEFPKGVTTEEIAASISPGLKKKAVAGKLNDEMIDLVTPIEEDGAV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEV--QVAIGPIIEDGFYYDFDKEQPFSSD 117
            IIT +    L ++RHS AH++A+A++ ++ +V  ++ IGP+IE+GFYYD D E+  + +
Sbjct: 61  SIITLDSEDGLYILRHSTAHLLAQALKRLYKDVKLELGIGPVIENGFYYDIDMEEAITVE 120

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +  +IEK+MQ+I+  +   ++  +   +A   FE   +  K++++  +P    +++Y QG
Sbjct: 121 DFKKIEKEMQKIVNENLEIVRHEVPRAEALRRFEEIGDELKLDLINDLPEDAVISIYEQG 180

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           E+FDLCRG H+ STG++K  FKL+ VAGAYWRGDSN  ML RIYGTA+  + EL ++L  
Sbjct: 181 EFFDLCRGVHLPSTGKIK-VFKLLSVAGAYWRGDSNNKMLQRIYGTAFVKKAELDEHLRM 239

Query: 238 LEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEIN 295
           LEE+++RDHRKL +E+ LF  ++  G G+  W  KG  I + +  Y+  ++    Y+ + 
Sbjct: 240 LEEAKERDHRKLGKELKLFTNSQKVGQGLPLWLPKGATIRRIIERYIVDKEASLGYDHVY 299

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP +  + L++ SGHW+ YR  MF     D+         L+PMNCP H+ V+ + + SY
Sbjct: 300 TPVLGSRELYETSGHWNHYRDGMFPSMEMDN-----EELVLRPMNCPHHMMVYKNDIHSY 354

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+  E  ++ NL + +Y
Sbjct: 355 RELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVY 414

Query: 416 KDFGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
           KDFG E    +LS R     +K    D +W+ A+ ++K  +D +       ++     GE
Sbjct: 415 KDFGLENYSFRLSYRDPADTKKYYADDEMWEKAQGMLKEAMDEMG------LDYYEAEGE 468

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
            AFYGPK +  ++ A+G+D    T+Q+DF LP RF   YV    ++  PV+IHR V  ++
Sbjct: 469 AAFYGPKLDVQVRTALGKDETLSTVQLDFLLPERFELTYVGEDGKQHRPVVIHRGVVSTM 528

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNET 590
           ERF+  +IE +KG  P WL+P+Q  V  ++    ++YA+++ + L+   + +E D R E 
Sbjct: 529 ERFVAFLIEEYKGAFPTWLAPVQVQVIPVSPQVHLDYAKKVQDELRRAGIRVELDTREEK 588

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           I YKIRE  ++KIP +++ GD E +E  + +R++G   ++ ++L
Sbjct: 589 IGYKIREAQMQKIPYMLVVGDNEVTENGVNVRKYGEQKSETIAL 632


>gi|283779278|ref|YP_003370033.1| threonyl-tRNA synthetase [Pirellula staleyi DSM 6068]
 gi|283437731|gb|ADB16173.1| threonyl-tRNA synthetase [Pirellula staleyi DSM 6068]
          Length = 666

 Score =  509 bits (1312), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 267/654 (40%), Positives = 400/654 (61%), Gaps = 28/654 (4%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS---IEI 61
           +K+  PDGS K FP   T  +VA SI   LAK  +A  ++GKV  +   + E     + +
Sbjct: 2   LKVVLPDGSSKEFPGSVTPLEVAGSIGARLAKATLAADVDGKVVGVDTKLPESGEVKVRL 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +T +DP +L V+RHS AH+MA AV  +   VQ+A GP +E GFYYDF   +P S ++   
Sbjct: 62  LTRKDPEALGVMRHSAAHVMARAVMRLHQGVQLAFGPTVEGGFYYDFQLPKPLSEEDFPA 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVE-ILESIPAKENVTLYRQGEWF 180
           IE +M++I+A+D PF +  +   +A  + E   + YKVE I   +    +++ YRQGE+ 
Sbjct: 122 IEAEMKKIVAKDEPFERMDVDRSEALAMCEGLAQHYKVEHISTGLAEHPSLSFYRQGEFL 181

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV S G +  F KL+ +AGAYW+GDSN   L R+Y TA+ TQ+EL ++L  +EE
Sbjct: 182 DLCRGPHVPSAGAIGAF-KLLSLAGAYWKGDSNNAQLQRLYATAFFTQEELDEHLRKIEE 240

Query: 241 SEKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQ 298
           +++RDHR L +++DLF I    GSG+I W  KG  I   L S++R + I+  Y+ + TP 
Sbjct: 241 AKRRDHRLLGKQLDLFTINPLVGSGLILWLPKGATIRGLLESFVREELIRRGYQTVYTPH 300

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L++ SGH+  Y  +MF         K+   + LKPMNCP H+ ++    +SYREL
Sbjct: 301 IGKVDLYRTSGHFPYYADSMFP----PFVTKEEEEYLLKPMNCPHHIMIYKSKPRSYREL 356

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM---FNECLKIHNLIISIY 415
           P+RLAEFG+V+R E SG L G+ RVRGFTQDDAH+FCT EQ+   F  C+++   ++   
Sbjct: 357 PLRLAEFGTVHRYEKSGQLSGMTRVRGFTQDDAHIFCTDEQVPGEFEGCIEMTQFVL--- 413

Query: 416 KDFGFEKIMVKLSTR---PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
           K  G +   V+L  R    +K VGS+ LW+ A+  +      ++  ++  I      GE 
Sbjct: 414 KSLGLDNYRVRLGFRDPKSDKYVGSEELWNRAQGAL------VEVCTRLGIEYTAEEGEA 467

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPS--RFNAFYVNSHSEKCHPVMIHRAVFGS 530
           AFYGPK ++++ D IGR+WQ GT+Q+D+NLPS  RF+  YV + ++   PVMIHRA  GS
Sbjct: 468 AFYGPKADFVVTDCIGREWQLGTVQLDYNLPSAERFDLEYVGADNKIHRPVMIHRAPLGS 527

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
           +ERFIG++IE+F G  PLWL+P QA V T++  +  Y +E+   L+S    +  D+R+E 
Sbjct: 528 MERFIGVLIEHFAGAFPLWLAPEQARVVTVSEKSEAYGREVEEKLRSAGFRVSGDYRSEK 587

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  KIR+  ++ IP + + G ++A + ++ +R         +SL DA+  L+ E
Sbjct: 588 LGAKIRDAQLELIPYMFVVGPRDAEQGTVSLRDRLDGDLGALSLADAMQRLSDE 641


>gi|116626335|ref|YP_828491.1| threonyl-tRNA synthetase [Candidatus Solibacter usitatus Ellin6076]
 gi|116229497|gb|ABJ88206.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Candidatus
           Solibacter usitatus Ellin6076]
          Length = 644

 Score =  509 bits (1312), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 269/628 (42%), Positives = 380/628 (60%), Gaps = 23/628 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
           S+I++T PDGS ++        D+A+SIS  LA  A+   +NG++ DL+ P+ ++ ++EI
Sbjct: 2   SNIQITLPDGSTQSVAAETRPIDIAKSISPRLADAALVAKVNGELFDLTRPIEKDATLEI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +T ++P SL V RHS AH++A AV  ++PE Q+ IGP IE+GFYYDFD+  PF+ ++L +
Sbjct: 62  LTAKNPESLDVYRHSTAHLLAAAVLELYPETQLGIGPPIENGFYYDFDRPAPFTPEDLEK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF- 180
           IEKKM EI AR  P+ +     +   E  +   EA+    L    A E  T Y  G  F 
Sbjct: 122 IEKKMWEIQARALPYERVLTPKD---EGLKKYSEAWMKCQLIDERAGEIFTEYTLGPKFI 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           D CRGPH+  T ++K F KL+ +AGAYW+GD     L RIYGTA+ + ++L  YL  +EE
Sbjct: 179 DFCRGPHLPDTSKIKAF-KLLSIAGAYWKGDEKNKQLQRIYGTAFFSPKDLDAYLKQVEE 237

Query: 241 SEKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQ 298
           ++KRDHRKL +E+DLF I E  G G+IF+H KG  I + L  +MR + +K  Y  + TP 
Sbjct: 238 AKKRDHRKLGKELDLFSIQELAGPGLIFFHPKGGIIRKLLEDWMRDQYLKRGYSLVYTPH 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    LW+ SGH + Y  NMF     DD       + LKPMNCP H+ ++    +SYR+L
Sbjct: 298 VAKLDLWKTSGHANFYAQNMFTPIELDDA-----EYQLKPMNCPFHILIYADRQRSYRDL 352

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           PVRL E G+VYR E SG+L+GL RVRGFTQDDAH+FC + Q   E +      I     +
Sbjct: 353 PVRLGELGTVYRYERSGTLNGLFRVRGFTQDDAHIFCMQSQAEEEVVNCLQFAIDTLAAY 412

Query: 419 GFEKIMVKLST----RPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           GFEK   ++ST       K  G+   W+ AE  ++  +D +K      IN  V+  E AF
Sbjct: 413 GFEKYDAEISTWDGGASGKYDGTPDQWEMAEGALRRAVDKLK------INAKVVADEAAF 466

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  L DAIGR WQ  T+Q DF LP RF   Y+    +   P+M+HRA++GSIERF
Sbjct: 467 YGPKIDVKLVDAIGRKWQLSTVQFDFTLPRRFGLEYIGEDGKAHQPIMVHRALYGSIERF 526

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
            GI++E++ G  P+WL+P+QA +  IT    EYA+ I   L+   +    D RNE +N K
Sbjct: 527 FGILVEHYAGAFPVWLAPVQATILPITDRQTEYARGIKKQLEEAGIRATVDERNEKVNLK 586

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIR 622
           IR+  ++KIP +++ GD+E     + +R
Sbjct: 587 IRDAQMQKIPYMLVVGDREQESGKVAVR 614


>gi|302121711|gb|ADK92877.1| threonyl-tRNA synthetase [Hypericum perforatum]
          Length = 721

 Score =  509 bits (1311), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 262/597 (43%), Positives = 372/597 (62%), Gaps = 28/597 (4%)

Query: 56  EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFS 115
           E  I + T +    L  IRH+CAH+MA AVQ ++P+ +V IGP IE+GFYYDFD E P +
Sbjct: 126 EERIVLPTNQSSDRLLKIRHTCAHVMAMAVQKLYPDAKVTIGPWIENGFYYDFDME-PLT 184

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESI---------- 165
             EL +I+K+M  II R+ P +++ +S ++A+    S  E YK+EIL+SI          
Sbjct: 185 DKELKRIKKEMDRIIGRNLPLVREEVSRDEAQRRIMSVNEPYKMEILDSIKEEPITIYHI 244

Query: 166 PAKENVTLYRQGEWFDLCRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTA 224
            A   ++L+   EW+DLC GPHV +TG + +K  +L  VAGAYWRGD    ML RIYGTA
Sbjct: 245 AACRFISLFLGDEWWDLCAGPHVETTGIIDRKAVELESVAGAYWRGDEKNQMLQRIYGTA 304

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLI--S 281
           W ++++L  YL+F EE+++RDHR+L +++DLF I  E G G++FWH KG  I + +I  +
Sbjct: 305 WESEEQLKAYLHFKEEAKRRDHRRLGQDLDLFSIQDEAGGGLVFWHPKG-AIVRHIIEDA 363

Query: 282 YMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           + +  I + YE + TP V    LW+ SGH D YR NMF     +D       + L+PMNC
Sbjct: 364 WKKMHIANGYELLYTPHVAKADLWKISGHLDFYRENMFEQMKIED-----EQYQLRPMNC 418

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
           P H+ ++     SYR+ P+R+AE G+VYR E SGSLHGL RVRGFTQDDAH+FC ++Q+ 
Sbjct: 419 PYHILIYKRKQNSYRDFPIRVAELGTVYRYELSGSLHGLFRVRGFTQDDAHIFCLEDQIK 478

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
           +E   + +L   I   FGF +  V LSTRPEK VG D +WD A N ++  LD        
Sbjct: 479 DEIRGVLDLTEEILLLFGFSRYEVNLSTRPEKAVGGDEIWDKATNALRNALD------DK 532

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
             +  +  G GAFYGPK +  ++DA+GR WQC TIQVDFNLP RF+  YV++ SEK  P+
Sbjct: 533 GWDYEIDEGGGAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDITYVDATSEKKRPI 592

Query: 522 MIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLS 581
           +IHRAV GS+ERF G++IE++ G+ PLWL+PIQ  V  +T + +E+  E+   LK   + 
Sbjct: 593 LIHRAVLGSLERFFGVLIEHYAGDFPLWLTPIQVRVLPVTDNQLEFCNEVTRKLKDSGVR 652

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
            E     E +   IR    +K+P++ + G KE   +++ +R   S     + + D I
Sbjct: 653 AEV-CHGERLPKLIRNAEKQKVPLMAVVGPKEVETQTVTVRSRSSGDVGTIDIDDFI 708


>gi|313887217|ref|ZP_07820913.1| threonine--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I]
 gi|312923446|gb|EFR34259.1| threonine--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I]
          Length = 650

 Score =  509 bits (1311), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 261/643 (40%), Positives = 395/643 (61%), Gaps = 21/643 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M   I +T PDGS+K      T  D+A SIS  LA++ +A   +GK+ D+  P+  +  I
Sbjct: 1   MSDQIHITLPDGSVKEMKQGVTPLDIANSISERLAQEVLAAECDGKLIDVRTPLMHDAHI 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDE 118
           +++  ED        H+ AH+MAEA+Q ++P VQ  IGP I+ GFYYD D  ++   S++
Sbjct: 61  KLLKWEDEGGKHAFWHTSAHLMAEALQELYPGVQFGIGPAIDAGFYYDIDTGDEVIKSED 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L +IE KM E+  R     ++ +S   A + F+   + YK+E++  +     +T Y QG 
Sbjct: 121 LPKIEAKMLELARRKETLERKAISKSDALDFFKKTGQGYKLELINDL-EDGTITTYTQGA 179

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + DLCRGPH+ ST  +K   KL+ VAGAYWRGD  R  L+RIYG  +  ++ L +YL  L
Sbjct: 180 FTDLCRGPHLPSTAPIKAV-KLLSVAGAYWRGDETRKQLTRIYGITFPKKKLLDEYLALL 238

Query: 239 EESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINT 296
           EE++KRDHRK+ +E++LF  ++  G G+  W  +G ++   L  +++R + +  Y+++ T
Sbjct: 239 EEAKKRDHRKIGKELELFAFSQRVGQGLPLWLPRGTQLRLKLEDFLKRIQKRYGYQQVMT 298

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P + +  L++ SGH+  Y A+ F V     T ++   F LKPMNCP H  ++     SYR
Sbjct: 299 PHIGNVELYKTSGHYAKYGADSFQVIT---TPQEGEAFMLKPMNCPHHCEIYRLKPHSYR 355

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +LPVRLAEFG+VYR E SG LHGL RVRGFTQDDAH+FC  +Q+  E LK+ ++I  I++
Sbjct: 356 DLPVRLAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCRPDQVKEEFLKVMDIIFIIFR 415

Query: 417 DFGFEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
              FE    ++S R +    K +GS+  WD AE  +      I+   +  +   V   E 
Sbjct: 416 ALDFENFEAQISLRSQTDRSKYIGSEENWDRAEQAI------IEACQEAGLPAHVEYDEA 469

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           AFYGPK ++++KDA+GR WQ GTIQVD+NLP RF+  Y    ++K  PVMIHRA FGS+E
Sbjct: 470 AFYGPKLDFMVKDALGRRWQLGTIQVDYNLPERFDLEYTGEDNQKHRPVMIHRAPFGSME 529

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
           RF+ ++IE+  G  PLWL+P Q ++  ++    EYA E+A  L  H +S+  D RNE + 
Sbjct: 530 RFVAVLIEHTAGKFPLWLAPDQVVILPVSERFNEYANEVAAALSEHDISVSIDDRNEKVG 589

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRF--GSTTTQKVS 633
            KIR++ +K+IP ++I G++E ++ ++ +R+   G   T+K+S
Sbjct: 590 RKIRDNELKRIPYMLIVGEQEQADGTVSVRKQGEGDVGTEKIS 632


>gi|317476770|ref|ZP_07936013.1| threonyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA]
 gi|316906945|gb|EFV28656.1| threonyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA]
          Length = 646

 Score =  509 bits (1311), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 260/629 (41%), Positives = 390/629 (62%), Gaps = 19/629 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIEIITP 64
           IK+TFPDGS++ +    TG  +AESIS  LA+  +A  +NG+  DL  P+ E +  ++  
Sbjct: 2   IKITFPDGSVREYNEGVTGLQIAESISSRLAQDVLACGVNGETYDLGRPISEDAEVVLYK 61

Query: 65  -EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
            ED +      H+ AH++AEA+Q ++P +Q  IGP IE+GFYYD D  E      +L  I
Sbjct: 62  WEDEQGKHAFWHTSAHLLAEALQELYPGIQFGIGPAIENGFYYDVDPGEATIKEADLPAI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EKKM E++A+    +++ +S   A ++F  + E YK E++  +    ++T Y QG + DL
Sbjct: 122 EKKMAELVAKKEAVVRESISKTDALKMFGDRGETYKCELISEL-EDGHITTYTQGAFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ +   +K   KL  VAGAYWRG  +R M++RIYG  +  ++ L +YL  LEE++
Sbjct: 181 CRGPHLMTIAPIKAI-KLTSVAGAYWRGQEDRKMMTRIYGITFPKKKMLDEYLVLLEEAK 239

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           KRDHRK+ +EMDLF  ++  G G+  W  KG  +   L  ++RR + + DY+E+  P + 
Sbjct: 240 KRDHRKIGKEMDLFMFSDTVGKGLPMWLPKGAALRIRLQEFLRRIQARYDYQEVMCPPIG 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ L+  SGH+  Y  + F       T ++   + LKPMNCP H  ++ +  +SY++LP+
Sbjct: 300 NKLLYITSGHYAKYGKDSFQ---PIHTPEEGEEYFLKPMNCPHHCMIYKNSPRSYKDLPL 356

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLAEFG+V R E SG LHGL RVR FTQDDAH+FC  +Q+ +E L++ ++I  +++   F
Sbjct: 357 RLAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKDEFLRVMDIISIVFQSMHF 416

Query: 421 EKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           E    ++S R     EK +GSD  W+ AE  +      I+   +  +   V  GE AFYG
Sbjct: 417 ENFEAQISLRDKVNREKYIGSDENWEKAEQAI------IEACEEKGLKAKVEYGEAAFYG 470

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK ++++KDAIGR WQ GTIQVD+NLP RF   Y  + ++K  PVMIHRA FGS+ERF+ 
Sbjct: 471 PKLDFMVKDAIGRRWQLGTIQVDYNLPERFQLEYTGADNQKHRPVMIHRAPFGSMERFVA 530

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           ++IE+  G  PLWL+P Q  +  I+    +YAQE+ + LK + +    D RNE I  KIR
Sbjct: 531 VLIEHTAGKFPLWLTPDQVAILPISEKFNDYAQEVKDYLKRYDVRAIVDERNEKIGRKIR 590

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFG 625
           ++ +K+IP ++I G+KEA  R + +R+ G
Sbjct: 591 DNEMKRIPYMLIVGEKEAENREVSVRKQG 619


>gi|304382923|ref|ZP_07365405.1| threonine--tRNA ligase [Prevotella marshii DSM 16973]
 gi|304335948|gb|EFM02196.1| threonine--tRNA ligase [Prevotella marshii DSM 16973]
          Length = 654

 Score =  509 bits (1310), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 259/641 (40%), Positives = 403/641 (62%), Gaps = 19/641 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+TFPDGS++ +    TG  +A+SIS +LA++ ++ ++NGK  +L+ P+ E  +  +  
Sbjct: 2   IKITFPDGSVREYEKGVTGLQIAQSISPALAREVISCSVNGKTVELNRPINEDATFALYK 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ--PFSSDELAQ 121
            ED        H+ AH++AEA+Q ++P +Q   GP IE+GF+YD   +     S ++  +
Sbjct: 62  WEDEEGKHTFWHTSAHLLAEALQELYPGIQFGFGPAIENGFFYDVMPKDGVAISENDFPK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE+KM+E+  +D P +++ +S   A + F+   + YKVE ++   A   ++ Y QG + D
Sbjct: 122 IEEKMRELAKKDEPVVRRDISKADALKEFKEDGQEYKVEHIDLDLADGTISTYTQGAFTD 181

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ STG +K   K+  VAGA+WRGD+ R  ++RIYG  +  ++ L +YL  LEE+
Sbjct: 182 LCRGPHLVSTGAIKAI-KITSVAGAFWRGDAKREQMTRIYGITFPKKKMLDEYLVMLEEA 240

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQV 299
           +KRDHRK+ +EM+LF  +E  G G+  W  KG ++   L   +R+  K+  Y+E+ TP +
Sbjct: 241 KKRDHRKIGKEMELFMFSERVGKGLPIWLPKGTELRLRLQGMLRKIQKNYGYQEVITPHI 300

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             ++L+  SGH+  Y  + F       T ++   + LKPMNCP H  VF+   +SY++LP
Sbjct: 301 GSKNLYVTSGHYAHYGKDSFQ---PIHTPEEDEEYMLKPMNCPHHCEVFSWKPRSYKDLP 357

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AEFG+VYR E SG LHGL RVR FTQDDAH+FC  EQ+ +E L++ ++I +++K F 
Sbjct: 358 LRIAEFGTVYRYEKSGELHGLTRVRSFTQDDAHIFCRPEQVKSEFLRVMDIIQTVFKVFD 417

Query: 420 FEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           F+ +  ++S R     EK +GSD +W+ +E  +      I+   +  +N  +  GE AFY
Sbjct: 418 FKNVEAQISLRDPNDREKYIGSDEVWEHSEQSI------IEACKEKGLNAKIAYGEAAFY 471

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDAIGR WQ GTIQVD+NLP RF   Y    + K  PVMIHRA FGS+ERF 
Sbjct: 472 GPKLDFMVKDAIGRRWQLGTIQVDYNLPQRFKLEYTADDNSKQTPVMIHRAPFGSMERFT 531

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE+  G+ PLWL+P Q  +  I+    +YA+++A+ L S  +    D RNE I  KI
Sbjct: 532 AVLIEHTAGHFPLWLTPDQVAILPISEKFNDYARKVAHYLDSVGVRANIDERNEKIGRKI 591

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
           R++ IK++P ++I G+KEA+E  + +R+ G      +S+ D
Sbjct: 592 RDNEIKRVPYMVIVGEKEAAEGLVSMRKQGGGEQATMSMED 632


>gi|332300493|ref|YP_004442414.1| threonyl-tRNA synthetase [Porphyromonas asaccharolytica DSM 20707]
 gi|332177556|gb|AEE13246.1| threonyl-tRNA synthetase [Porphyromonas asaccharolytica DSM 20707]
          Length = 650

 Score =  508 bits (1309), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 261/643 (40%), Positives = 395/643 (61%), Gaps = 21/643 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M   I +T PDGS+K      T  D+A SIS  LA++ +A   +GK+ D+  P+  +  I
Sbjct: 1   MSDQIHITLPDGSVKEMKQGVTPLDIANSISERLAQEVLAAECDGKLIDVRTPLMHDAHI 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDE 118
           +++  ED        H+ AH+MAEA+Q ++P VQ  IGP I+ GFYYD D  ++   S++
Sbjct: 61  KLLKWEDEGGKHAFWHTSAHLMAEALQELYPGVQFGIGPAIDAGFYYDIDTGDEVIKSED 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L +IE KM E+  R     ++ +S   A + F+   + YK+E++  +     +T Y QG 
Sbjct: 121 LPKIEAKMLELARRKETLERKAISKSDALDFFKKTGQGYKLELINDL-EDGTITTYTQGA 179

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + DLCRGPH+ ST  +K   KL+ VAGAYWRGD  R  L+RIYG  +  ++ L +YL  L
Sbjct: 180 FTDLCRGPHLPSTAPIKAV-KLLSVAGAYWRGDETRKQLTRIYGITFPKKKLLDEYLALL 238

Query: 239 EESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINT 296
           EE++KRDHRK+ +E++LF  ++  G G+  W  +G ++   L  +++R + +  Y+++ T
Sbjct: 239 EEAKKRDHRKIGKELELFAFSQRVGQGLPLWLPRGTQLRLKLEDFLKRIQKRYGYQQVMT 298

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P + +  L++ SGH+  Y A+ F V     T ++   F LKPMNCP H  ++     SYR
Sbjct: 299 PHIGNVELYKTSGHYAKYGADSFQVIT---TPQEGEAFMLKPMNCPHHCEIYRLKPHSYR 355

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +LPVRLAEFG+VYR E SG LHGL RVRGFTQDDAH+FC  +Q+  E LK+ ++I  I++
Sbjct: 356 DLPVRLAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCRPDQVKEEFLKVMDIIFIIFR 415

Query: 417 DFGFEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
              FE    ++S R +    K +GS+  WD AE  +      I+   +  +   V   E 
Sbjct: 416 ALDFENFEAQISLRSQTDRSKYIGSEENWDRAEQAI------IEACQEAGLPAHVEYDEA 469

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           AFYGPK ++++KDA+GR WQ GTIQVD+NLP RF+  Y    ++K  PVMIHRA FGS+E
Sbjct: 470 AFYGPKLDFMVKDALGRRWQLGTIQVDYNLPERFDLEYTGEDNQKHRPVMIHRAPFGSME 529

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
           RF+ ++IE+  G  PLWL+P Q ++  ++    EYA E+A  L  H +S+  D RNE + 
Sbjct: 530 RFVAVLIEHTAGKFPLWLAPDQVVILPVSERFNEYANEVAVALSEHDISVSIDDRNEKVG 589

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRF--GSTTTQKVS 633
            KIR++ +K+IP ++I G++E ++ ++ +R+   G   T+K+S
Sbjct: 590 RKIRDNELKRIPYMLIVGEQEQADGTVSVRKQGEGDVGTEKIS 632


>gi|195952891|ref|YP_002121181.1| threonyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
 gi|195932503|gb|ACG57203.1| threonyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
          Length = 637

 Score =  508 bits (1309), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 254/581 (43%), Positives = 383/581 (65%), Gaps = 20/581 (3%)

Query: 49  DLSDPVREG-SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE--VQVAIGPIIEDGFY 105
           DL  P+  G +++ IT +D  SL ++RHS AHIMA+A++ I+ +  V + IGP  EDGF+
Sbjct: 43  DLQTPIYHGGTLKPITKQDKESLDILRHSLAHIMAQALKEIYGDEKVHLGIGPTTEDGFF 102

Query: 106 YDFDKE-QPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES 164
           YD + E      ++L  IE KM+EII R     ++ L  E+A + FE+KKE YK++I+ S
Sbjct: 103 YDVEVEGHHIGEEDLKIIENKMKEIIKRGLDIKRKELPREEALKFFENKKEVYKLDIINS 162

Query: 165 IPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTA 224
           +P+   +++Y QGE+ DLCRGPH+ +T  +   FKL  +AGAYWR D+++PML RIYG A
Sbjct: 163 LPSDAKISVYEQGEFVDLCRGPHIPNTA-LAGAFKLSSIAGAYWRADASKPMLQRIYGIA 221

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM 283
           + T++EL + L   EE++KRDHR+L +E++LF I E  G G+I W  KG  + Q +  Y+
Sbjct: 222 FWTEKELEERLKLYEEAKKRDHRRLGKELELFTIDEQVGPGLIIWLPKGAILRQVVEDYL 281

Query: 284 RRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMF-AVKCADDTIKDLRTFALKPMNC 341
           + K +  +Y+ + TP V    LW+ SGH   Y+ NMF  +K  +++      + +KPMNC
Sbjct: 282 KEKHRALNYQFVYTPHVGKSTLWETSGHLSYYKENMFPGMKIEEES------YYVKPMNC 335

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
           P H+A++   ++S++ELP+++AE G+VYR E SG LHGLMRVRGFTQDDAH+FC +E + 
Sbjct: 336 PFHMAIYKSKIRSHKELPIKIAELGTVYRYEMSGVLHGLMRVRGFTQDDAHIFCKEEDVK 395

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
           +   +   L   + KDFGF    + +ST+P+  +G++  W  +E+ +K  L+ +  + + 
Sbjct: 396 SVIKETLELAFDVLKDFGFYDYQIFISTKPKDAIGTEENWKISESALKESLEALDKTYE- 454

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
                +  G GAFYGPK +  +KDAIGR WQC TIQ DFNLP RF+  YV   ++K  P 
Sbjct: 455 -----IDEGGGAFYGPKIDIKIKDAIGRFWQCSTIQFDFNLPERFDLTYVGEDNKKHRPY 509

Query: 522 MIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLS 581
           +IHRA+ GSIERF G++IE++ G+LP+WLSPIQA +  I    ++YA+E+  LLK  ++ 
Sbjct: 510 IIHRALLGSIERFTGVLIEHYAGHLPIWLSPIQAAIIPIADRHLDYAKEVFELLKVQNIR 569

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
              D R E +N KIR++ ++KIPI+++ GDKE  E++  +R
Sbjct: 570 TYIDDRPERMNAKIRDNELQKIPILLVVGDKEVQEKTFSVR 610


>gi|228469293|ref|ZP_04054319.1| threonyl-tRNA synthetase [Porphyromonas uenonis 60-3]
 gi|228309192|gb|EEK17794.1| threonyl-tRNA synthetase [Porphyromonas uenonis 60-3]
          Length = 650

 Score =  508 bits (1308), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 262/643 (40%), Positives = 394/643 (61%), Gaps = 21/643 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M   I +T PDGS+K     +T  D+A SIS  LA++ +A   +GK+ D+  P+ ++  I
Sbjct: 1   MSDQIHITLPDGSVKEMKQGSTPLDIANSISERLAQEVLAAECDGKLIDVRTPLMQDAHI 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDE 118
           +++  ED        H+ AH+MAEA+Q ++P VQ  IGP IE GFYYD D  +Q   S++
Sbjct: 61  KLLKWEDEGGKHAFWHTSAHLMAEALQELYPGVQFGIGPAIEAGFYYDIDTGDQVIKSED 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L +IE KM E+  R     ++ +S   A + F+   + YK+E++  +     +T Y QG 
Sbjct: 121 LPKIEAKMLELARRKETLERKAISKSDALDFFKKTGQTYKLELINDL-EDGTITTYTQGA 179

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + DLCRGPH+ ST  +K   KL+ VAGAYWRGD  R  L+RIYG  +  ++ L +YL  L
Sbjct: 180 FTDLCRGPHLPSTAPIKAV-KLLSVAGAYWRGDETRRQLTRIYGITFPKKKLLDEYLALL 238

Query: 239 EESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINT 296
           EE++KRDHRK+ +E++LF  ++  G G+  W  +G ++   L  +++R + +  Y+++ T
Sbjct: 239 EEAKKRDHRKIGKELELFAFSQRVGQGLPLWLPRGTQLRLKLEDFLKRIQKRYGYQQVMT 298

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P + +  L++ SGH+  Y A+ F V     T ++   F LKPMNCP H  ++     SYR
Sbjct: 299 PHIGNVELYKTSGHYAKYGADSFQVIT---TPQEGEAFMLKPMNCPHHCEIYKLKPHSYR 355

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +LPVRLAEFG+VYR E SG LHGL RVRGFTQDDAH+FC  +Q+  E LK+  +I  I++
Sbjct: 356 DLPVRLAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCRPDQVKEEFLKVMEIIFIIFR 415

Query: 417 DFGFEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
              FE    ++S R +    K +GS+  WD AE  +      I+   +  +   V   E 
Sbjct: 416 ALDFENFEAQISLRSQTDRSKYIGSEENWDRAEQAI------IEACQEAGLPAHVEYDEA 469

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           AFYGPK ++++KDA+GR WQ GTIQVD+NLP RF   Y    ++K  PVMIHRA FGS+E
Sbjct: 470 AFYGPKLDFMVKDALGRRWQLGTIQVDYNLPERFELEYTGEDNQKHRPVMIHRAPFGSME 529

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
           RF+ ++IE+  G  PLWLSP Q ++  ++    +YA E+A  L    +S+  D RNE + 
Sbjct: 530 RFVAVLIEHTAGKFPLWLSPDQVVILPVSERFNDYAYEVAAALSEQDISVSVDDRNEKVG 589

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRF--GSTTTQKVS 633
            KIR++ +K+IP ++I G++E ++ ++ +R+   G   T+K+S
Sbjct: 590 RKIRDNELKRIPYMLIVGEQEQADGTVSVRKQGEGDAGTEKIS 632


>gi|259047194|ref|ZP_05737595.1| threonine--tRNA ligase [Granulicatella adiacens ATCC 49175]
 gi|259036244|gb|EEW37499.1| threonine--tRNA ligase [Granulicatella adiacens ATCC 49175]
          Length = 647

 Score =  508 bits (1308), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 263/642 (40%), Positives = 401/642 (62%), Gaps = 28/642 (4%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+TFPDG++K FP   T  +VAESIS+SLAKKA+A  +NG++ D    + E  SIEI+T
Sbjct: 2   IKITFPDGAVKEFPKGITVKEVAESISKSLAKKALAGKVNGELVDFDRSIEEDASIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+   +L ++RHS AH++A A+  ++P +   +GP IE GFYYD D     + D L ++E
Sbjct: 62  PDHEDALGILRHSTAHLLAHALTRLYPGIHFGVGPAIETGFYYDTDMPNQLTEDALPEVE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M +I+  + P +++ +S ++A E+F +  + YKVE++  +P  E +T+Y+Q ++ DLC
Sbjct: 122 AEMMKIVKENYPIVRREVSRKEALEIFAN--DPYKVELINGLPEDETITVYQQEDFVDLC 179

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RG HV STG+++  FKL+ +AGAYWRGDSN  M+ R+YGTA+  + +L ++L   EE+++
Sbjct: 180 RGIHVPSTGRIQ-VFKLLSLAGAYWRGDSNNKMMQRVYGTAFFDKADLKEFLKMREEAKE 238

Query: 244 RDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLD 301
           RDHRKL +E+DLF I+++ GSG+ FW  KG  I +T+  Y+  ++I   Y+ + TP + D
Sbjct: 239 RDHRKLGKELDLFMISQEVGSGLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPVMAD 298

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             L++ SGHW  Y+ +MF        + D     L+PMNCP H+ V+ + + SYRELP+R
Sbjct: 299 VGLYKTSGHWAHYQEDMFPPM----DMGDGELLVLRPMNCPHHMMVYKNHIHSYRELPIR 354

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  +I +LI  +Y DF  +
Sbjct: 355 IAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRILDLIREVYSDFNVK 414

Query: 422 KIMVKLSTR-PE---KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
               +LS R PE   K    D +W+ AE ++K  +D +     + I      GE AFYGP
Sbjct: 415 DYRFRLSYRDPEDKHKYFDDDEMWNKAETMLKEAMDEMGLEYFEAI------GEAAFYGP 468

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH-PVMIHRAVFGSIERFIG 536
           K +   + A+G +    TIQ+DF LP RF+  YV    +  H PV+IHR V  + ERF+ 
Sbjct: 469 KLDIQFRTAMGLEETMSTIQLDFLLPERFDLTYVGEDGDNTHRPVVIHRGVVSTAERFVA 528

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEY----AQEIANLLKSHHLSIETDFRNETIN 592
            +IE +KG  P WL+P+QA   TI   +VE+    A+E+   +    + +E D RNE + 
Sbjct: 529 YLIEEYKGAFPTWLAPVQA---TIIPVSVEHHYDAARELKEKMARLGMRVELDDRNEKMG 585

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           YKIR    +KIP  ++ GDKE  E ++ +RR+GS  T+ +S+
Sbjct: 586 YKIRASQTQKIPYQLVIGDKEVEEGTVTVRRYGSKETKSMSI 627


>gi|255534998|ref|YP_003095369.1| threonyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10]
 gi|255341194|gb|ACU07307.1| Threonyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10]
          Length = 639

 Score =  508 bits (1308), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 267/650 (41%), Positives = 396/650 (60%), Gaps = 23/650 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           IK+T PDG IK F    T  DVA+SIS  LA+  ++  ++G   ++S P+  + +++++T
Sbjct: 2   IKITLPDGGIKEFESGVTPLDVAKSISEGLARNVISALVDGTQTEISSPITADSTLQLLT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQI 122
             D        HS AH++A+A+   +PE ++ IGP IE+GFYYD D  ++  S  +   I
Sbjct: 62  WNDDLGKKAFWHSSAHLLAQAIIEFYPEAKLTIGPAIENGFYYDVDFGDETLSEKDFENI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EKKM E   ++S F  Q     KA  L E     YK E++ ++   E +T      + DL
Sbjct: 122 EKKMLENAKKNSTF--QLYPVSKADALKEYADNPYKTELISNLNDGE-ITFCSHDNFTDL 178

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRG H+ STG VK   K++  AGAYWRGD     L+R+YG ++  Q++LT+YL  LEE++
Sbjct: 179 CRGGHIPSTGIVKAV-KILNAAGAYWRGDEKNRQLTRVYGISFPKQKDLTEYLERLEEAK 237

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           +RDHRKL +E+ +F  +E  G+G+  W  KG  + + L +++   + K  YE + TP + 
Sbjct: 238 RRDHRKLGKELGIFAFSEKVGAGLPLWLPKGAALRKKLENFLSEAQKKAGYEFVMTPHIG 297

Query: 301 DQHLWQQSGHWDSYRANMF-AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            + L+  SGHWD Y A+ F  +K  ++       F LKPMNCP H  ++  G  SY++LP
Sbjct: 298 AKELYVTSGHWDKYGADSFQPIKTPNEG----EEFMLKPMNCPHHCEIYKVGQWSYKDLP 353

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
            R AEFG+VYR E SG LHGL RVRGFTQDDAH+FCT +Q+  E   + +L + ++K  G
Sbjct: 354 KRFAEFGTVYRYEQSGELHGLTRVRGFTQDDAHLFCTPDQLLTEFENVIDLTLYVFKSLG 413

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           FE  + ++S R     EK +GSD  W  AEN +      I+ +++  + T V  GE AFY
Sbjct: 414 FEDFVTQISLRDPENKEKYIGSDENWKKAENAI------IQAAAKKGLKTVVEYGEAAFY 467

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDA+GR WQ GTIQVD+NLP RF+ +Y+ S +EK  PVMIHRA FGS+ERFI
Sbjct: 468 GPKLDFMVKDALGRSWQLGTIQVDYNLPERFDLWYIGSDNEKHRPVMIHRAPFGSMERFI 527

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            I++EN  G+ PLWL+P Q  +  I+    +YA++++ LL++H +    D RNE    KI
Sbjct: 528 AILLENTAGDFPLWLAPDQFTILPISEKYADYAKKVSELLENHDICGLIDDRNEKTGRKI 587

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           R+  IKK+P +++ G+ E    ++ +RR G      +S+ D I    ++S
Sbjct: 588 RDAEIKKLPFMLVVGETEELNGTVSVRRRGEGDLGTMSVEDFIAYFKEQS 637


>gi|189461814|ref|ZP_03010599.1| hypothetical protein BACCOP_02480 [Bacteroides coprocola DSM 17136]
 gi|189431408|gb|EDV00393.1| hypothetical protein BACCOP_02480 [Bacteroides coprocola DSM 17136]
          Length = 646

 Score =  508 bits (1307), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 262/640 (40%), Positives = 393/640 (61%), Gaps = 19/640 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIEIITP 64
           IK+TFPDGS++ +    TG  +AESIS  LA+  +A A+NG+  DL+ P+ E +  ++  
Sbjct: 2   IKITFPDGSVREYNEGVTGLQIAESISSRLAQDVLACAVNGETIDLTRPINEDAEFVLYK 61

Query: 65  -EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
            ED +      H+ AH++AEA+Q ++P +Q  IGP IE+GFYYD D  E      +L  I
Sbjct: 62  WEDEQGKHAFWHTSAHLLAEALQELYPGIQFGIGPAIENGFYYDVDPGEAVIKEGDLPAI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EKKM E+ ++    +++ +S E A ++F  + E YK E++  +    ++T Y QG + DL
Sbjct: 122 EKKMAELASKKEELVRKSISKEDALKMFGERGETYKCELISEL-EDGHITTYTQGAFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ ST  VK   KL+ VAGAYWRG  +R  ++RIYG  +  ++ L +YL  LEE++
Sbjct: 181 CRGPHLPSTAPVKAI-KLLSVAGAYWRGQEDRKQMTRIYGITFPKKKMLDEYLALLEEAK 239

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           KRDHRK+ +EMDLF  ++  G G+  W  KG  +   L  ++RR + + DY+E+  P + 
Sbjct: 240 KRDHRKIGKEMDLFMFSDTVGKGLPMWLPKGTALRIRLQDFLRRIQARYDYQEVMCPPIG 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ L+  SGH+  Y  + F       T ++   + LKPMNCP H  ++ +  +SYR+LP+
Sbjct: 300 NKLLYVTSGHYAKYGKDAFQ---PIHTPEEGEEYFLKPMNCPHHCMIYKNTPRSYRDLPL 356

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AEFG+V R E SG LHGL RVR FTQDDAH+FC  +Q+ +E L++ ++I  ++K  G 
Sbjct: 357 RIAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKDEFLRVMDIISIVFKSMGL 416

Query: 421 EKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           E    ++S R     EK +GSD  W+ AE  +      ++   +  +   V  GE AFYG
Sbjct: 417 ENFEAQISLRDKVNREKYIGSDENWEKAEQAI------VEACEEKGLKAKVEYGEAAFYG 470

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK ++++KDAIGR WQ GTIQVD+NLP RF   Y+ S ++K  PVMIHRA FGS+ERF+ 
Sbjct: 471 PKLDFMVKDAIGRRWQLGTIQVDYNLPERFQLEYMGSDNQKHRPVMIHRAPFGSMERFVA 530

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           ++IE+  G  PLWL+P Q  +  I+    +YA ++   LK   +    D RNE I  KIR
Sbjct: 531 VLIEHTAGKFPLWLTPDQVAILPISEKFNDYANQVRLELKKSDIRAIVDDRNEKIGRKIR 590

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
           ++ +K+IP ++I G+KEA    + +R+ G      + + D
Sbjct: 591 DNEMKRIPYMLIVGEKEAENGEVAVRKQGEGDKGTMKIED 630


>gi|323342132|ref|ZP_08082365.1| threonine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
 gi|322464557|gb|EFY09750.1| threonine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
          Length = 596

 Score =  507 bits (1306), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 256/583 (43%), Positives = 378/583 (64%), Gaps = 21/583 (3%)

Query: 56  EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPF 114
           E  I +   ED R L ++ HS AH++A AV+ ++PE +  +GP+IEDGFYYD D  +Q  
Sbjct: 10  EEVIMVNIREDER-LNILNHSSAHLLAHAVKRLYPEAKFWVGPVIEDGFYYDMDLGDQVL 68

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
           + ++L +IE  M++I   D    ++ L+ E+A E+F  K ++YK++I+ ++     ++ Y
Sbjct: 69  TEEDLPKIESMMRKIAKEDKRITREELTKEEALEIF--KDDSYKIDIINNLEDDATISAY 126

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
           RQ E+ DLCRGPHV +T ++K +FKL+KV+GAYW+GDSN  ML R+YG  + T+++L QY
Sbjct: 127 RQAEFIDLCRGPHVETTKKMK-YFKLLKVSGAYWKGDSNNKMLQRVYGITFETEEDLNQY 185

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEE 293
           L +LE ++ RDH+KL +E++LF ++E G G  FW   G  +   L  Y     IK  Y  
Sbjct: 186 LEWLEAAKARDHKKLGKELELFMMSEFGPGFPFWLPNGMTLRHALDEYYYNAHIKRGYVF 245

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
             TP +L++ LW+ SGHW++YR NM+       TI D R FA+KPMNCPG + V+ +GL 
Sbjct: 246 TQTPTMLNKELWEVSGHWENYRENMYT-----STIDD-REFAIKPMNCPGGMLVYKNGLH 299

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYR+LP+RLAE G V+R+E SG+L+GL RVR FTQDDAH+F  ++Q+ +E ++I + I  
Sbjct: 300 SYRDLPIRLAEMGHVHRHEASGALNGLFRVRSFTQDDAHLFMREDQLQDEIVEILDFINE 359

Query: 414 IYKDFGFEKIMVKLSTRPE-KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
           IY  FG     ++LSTRPE K +G   +WD +E  +K     +      +IN     G+G
Sbjct: 360 IYSTFGL-SYSIELSTRPEDKYIGDIDVWDRSEQALKEA--CMAAGVDFKINE----GDG 412

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           AFYGPK ++ ++D++ R WQCGT+Q+D NLP RF+  YV    +K  P+M+HRA+FGSIE
Sbjct: 413 AFYGPKLDFKVRDSLNRVWQCGTVQLDMNLPERFDLTYVAEDGKKKRPIMLHRAIFGSIE 472

Query: 533 RFIGIMIENFKGNLPLWLSPIQ-AIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           RFIGI+IE+F G  PLW++P Q  I+   T   ++YA E+ +LL    +    D RNE +
Sbjct: 473 RFIGILIEHFAGGFPLWMAPKQIEIIPVNTEFHMDYANEVCDLLLEKGIRAHVDGRNEKL 532

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
            Y++RE    KIP+ +I GD+E  +RS+ +RR+G        L
Sbjct: 533 GYRLREAQKNKIPLQLIIGDQEIEDRSVNVRRYGERAQNPFDL 575


>gi|330977708|gb|EGH77611.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. aptata str. DSM
           50252]
          Length = 477

 Score =  507 bits (1306), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 240/493 (48%), Positives = 340/493 (68%), Gaps = 18/493 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP+   +T PDGS ++F    + +DVA SI   LAK  VA  ++GK+ D  D +  + S+
Sbjct: 1   MPT---ITLPDGSQRSFDHAVSVADVALSIGAGLAKATVAGKVDGKLVDACDLIENDASL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           +IITP+D   L +IRHSCAH++  AV+ ++P  ++ IGP+I+DGFYYD   E PF+ D++
Sbjct: 58  QIITPKDQEGLEIIRHSCAHLVGHAVKQLYPTAKMVIGPVIDDGFYYDIAYEPPFTPDDM 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A IE++MQ++I +D   +K+     +  E+F ++ E YK+ ++E +P ++ + LY   E+
Sbjct: 118 AAIEQRMQQLIEKDYDVIKKVTPRAEVIEVFTARHEDYKLRLVEDMPNEQAMGLYYHEEY 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            D+CRGPHV +T +  K FKL K++GAYWRGD+    L R+YGTAW  +++L  Y+  +E
Sbjct: 178 VDMCRGPHVPNT-RFLKSFKLTKLSGAYWRGDAKNEQLQRVYGTAWADKKQLAAYILRIE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQ 298
           ++EKRDHRK+ + + LFH  E+  G++FWH +GW ++Q L  YMR+  +++ Y EI TPQ
Sbjct: 237 KAEKRDHRKIGKRLGLFHTQEEAPGMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHW +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYREL
Sbjct: 297 VVDRSLWEKSGHWANYADNMFT------TESESRDYAIKPMNCPCHVQVFNQGLKSYREL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFG+ +RNEPSG+LHG+MRVRGFTQDDAH+FCT++QM  E      L + +Y DF
Sbjct: 351 PMRLAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEDQMQAESAAFIKLTLDVYADF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+ I +KLSTRPEKRVGSD LWD AE+ +   LD+        +   +  GEGAFYGPK
Sbjct: 411 GFKDIELKLSTRPEKRVGSDELWDRAESALASALDSAG------LPYDLQPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDW 491
            E+ LKD +GR W
Sbjct: 465 IEFSLKDCLGRVW 477


>gi|269836488|ref|YP_003318716.1| threonyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
 gi|269785751|gb|ACZ37894.1| threonyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
          Length = 596

 Score =  507 bits (1306), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 245/555 (44%), Positives = 361/555 (65%), Gaps = 17/555 (3%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           LA +RHS AH+MA+AV  ++P  ++AIGP IE+GFYYDFD  +  + D+L +IE++M+EI
Sbjct: 22  LARMRHSAAHVMAQAVLEMFPGAKLAIGPAIENGFYYDFDLPRSLTPDDLGKIEERMREI 81

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
                PF ++ +S E+A +LF    + YK+EI++ +P    ++ Y Q  + DLCRGPHV 
Sbjct: 82  KQGAYPFERREVSREEALKLF--ADQPYKIEIIQDLPEDAVISTYTQDSFTDLCRGPHVD 139

Query: 190 STGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKL 249
           +T Q+  F KL+ VAGAYWRGD  RPML RIYGT+W +++EL  YL+ LEE+++RDHR+L
Sbjct: 140 NTSQIGHF-KLLNVAGAYWRGDEKRPMLQRIYGTSWRSEEELQDYLHRLEEAQRRDHRRL 198

Query: 250 AREMDLFHIAED-GSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQVLDQHLWQQ 307
            RE+DLF + ED G+G+I WH KG  I   +  +     +   Y+ + TP +    ++++
Sbjct: 199 GRELDLFSVNEDIGAGLILWHPKGAMIRHLIERFETEEHLARGYQLVYTPHIASGDIYRK 258

Query: 308 SGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGS 367
           SGH ++Y+ NM++    +        + LKPMNCPGH+ ++N  ++SYR+LP+RLAE G+
Sbjct: 259 SGHLETYQENMYSPMDIEGA-----PYYLKPMNCPGHIMIYNSQVRSYRDLPIRLAELGT 313

Query: 368 VYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKL 427
           VYR E SG+LHG++RVRGFTQDDAH+FC  +Q+ +E   + +L +   + FG+E     L
Sbjct: 314 VYRYERSGTLHGMLRVRGFTQDDAHIFCRPDQLEDEIKGVLDLALYFARVFGYE-YEAFL 372

Query: 428 STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAI 487
           +TRPEK +GSD  W+ A   +   L  +       I   +  G GAFYGPK +    D++
Sbjct: 373 ATRPEKSIGSDENWERATETLANALRNMG------IPYEIDPGAGAFYGPKIDIKFLDSL 426

Query: 488 GRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           GR+W   TIQVDFNLP RF+A YV    E+   VM+HR V GS+ERF+G +IE++ G  P
Sbjct: 427 GREWTGPTIQVDFNLPERFDATYVGEDGERHRVVMVHRTVLGSMERFVGGLIEHYAGAFP 486

Query: 548 LWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIII 607
           +WL+P+QA V  I    V YA E+A  LK   L +E +  N+ +  KIR   +++IP ++
Sbjct: 487 VWLAPVQAEVIPIADRHVPYAHEVAARLKEADLRVEVNDSNDRMQAKIRRAQLQRIPYML 546

Query: 608 ICGDKEASERSIGIR 622
           + GDKEA   ++ +R
Sbjct: 547 VVGDKEAEAGTVAVR 561


>gi|270293969|ref|ZP_06200171.1| threonyl-tRNA synthetase [Bacteroides sp. D20]
 gi|270275436|gb|EFA21296.1| threonyl-tRNA synthetase [Bacteroides sp. D20]
          Length = 646

 Score =  507 bits (1305), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 255/629 (40%), Positives = 390/629 (62%), Gaps = 19/629 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           IK+TFPDGS++ +    TG  +AESIS  LA+  +A  +NG++ DL  P+ ++  + +  
Sbjct: 2   IKITFPDGSVREYNEGVTGLQIAESISSRLAQDVLACGVNGEIYDLGRPIMQDAEVVLYK 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
            ED +      H+ AH++AEA+Q ++P +Q  IGP IE+GFYYD D  E      +L  I
Sbjct: 62  WEDEQGKHAFWHTSAHLLAEALQELYPGIQFGIGPAIENGFYYDVDPGETTIKEADLPAI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EKKM E++A+    ++Q ++   A ++F  + E YK E++  +    ++T Y QG + DL
Sbjct: 122 EKKMAELVAKKEAVVRQDIAKADALKMFGDRGETYKCELISEL-EDGHITTYTQGAFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ +T  +K   KL  VAGAYWRG  +R M++RIYG  +  ++ L +YL  LEE++
Sbjct: 181 CRGPHLMTTAPIKAI-KLTSVAGAYWRGQEDRKMMTRIYGITFPKKKMLDEYLVLLEEAK 239

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           KRDHRK+ +EMDLF  ++  G G+  W  KG  +   L  ++RR + + DY+E+  P + 
Sbjct: 240 KRDHRKIGKEMDLFMFSDTVGKGLPMWLPKGTALRIRLQDFLRRIQARYDYQEVMCPPIG 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ L+  SGH+  Y  + F       T ++   + LKPMNCP H  ++ +  +SY++LP+
Sbjct: 300 NKLLYITSGHYAKYGKDSFQ---PIHTPEEGEEYFLKPMNCPHHCMIYKNSPRSYKDLPL 356

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLAEFG+V R E SG LHGL RVR FTQDDAH+FC  +Q+ +E L++ ++I  +++   F
Sbjct: 357 RLAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKDEFLRVMDIISIVFESMDF 416

Query: 421 EKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           E    ++S R     EK +GSD  W+ AE  +      I+   +  +   +  GE AFYG
Sbjct: 417 ENFEAQISLRDKVNREKYIGSDENWEKAERAI------IEACEEKGLKAKIEYGEAAFYG 470

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK ++++KDAIGR WQ GTIQVD+NLP RF   Y  + ++K  PVM+HRA FGS+ERF+ 
Sbjct: 471 PKLDFMVKDAIGRRWQLGTIQVDYNLPERFQLEYTGADNQKHRPVMVHRAPFGSMERFVA 530

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           ++IE+  G  PLWL+P Q  +  I+    +YA E+   LK + +    D RNE I  KIR
Sbjct: 531 VLIEHTAGKFPLWLTPDQVAILPISEKFNDYAHEVKQYLKRYDIRAIVDERNEKIGRKIR 590

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFG 625
           ++ +K+IP +++ G+KEA  + + +R+ G
Sbjct: 591 DNEMKRIPYMLVVGEKEAENKEVAVRKQG 619


>gi|108804139|ref|YP_644076.1| Ser-tRNA(Thr) hydrolase/threonyl-tRNA synthetase [Rubrobacter
           xylanophilus DSM 9941]
 gi|123368184|sp|Q1AWG4|SYT_RUBXD RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|108765382|gb|ABG04264.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Rubrobacter
           xylanophilus DSM 9941]
          Length = 639

 Score =  507 bits (1305), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 263/631 (41%), Positives = 381/631 (60%), Gaps = 22/631 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPE 65
           +  PDG            DVA  I   LA+ AV   +NG++ DL  PV  G  +E +T +
Sbjct: 4   VRLPDGKELEVGSGERLEDVARRIGPRLARDAVVARLNGRLVDLDLPVDGGGELEFVTAD 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
            P  L V+RHS AH MA+A+  ++P  ++ IGP ++DGFYYD +     S ++L +IE+K
Sbjct: 64  SPEGLYVLRHSTAHAMAQAILELYPGSKLTIGPPVDDGFYYDIEVNGRISEEDLPRIEEK 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+EI  RD P  ++ +S E+AR L+  +   YK+E+++ IP  E V++YRQG++FDLCRG
Sbjct: 124 MREIARRDLPVRREEVSKEEARRLY--RDNPYKLELIDEIP-DERVSIYRQGDFFDLCRG 180

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV STG++  F KL  VAGAYWRGD N PML+RIYGTAW T+++L  YL  LEE+  RD
Sbjct: 181 PHVPSTGRLGAF-KLQSVAGAYWRGDENNPMLTRIYGTAWPTEKQLRAYLKRLEEARARD 239

Query: 246 HRKLAREMDLFHIAED--GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           HR+L RE+ LF  A +  G G+  +  KG  +   +  ++R  + +  Y+ + T  ++++
Sbjct: 240 HRRLGRELGLFTFAPEDVGPGIPLFLPKGETLRHLMEGFVREVQTRHGYQHVWTGHLVNE 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            L+ +SGH + YR  MF     D  +    ++ LKPMNCP H+ +FN   +SYRELPVR 
Sbjct: 300 RLYARSGHLEHYRDAMFP-PMRDGEV----SYRLKPMNCPSHMTLFNSRPRSYRELPVRY 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEF ++YR E SG L GL RVR  TQDDAHVFCT+EQ+  E  +   +I  +   +GF  
Sbjct: 355 AEFATLYRYEKSGELSGLTRVRSLTQDDAHVFCTEEQVQEEFARALAIIREVLDAYGFTD 414

Query: 423 IMVKLSTR-PE--KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
             V+LS R PE  K +  +  W  AE  ++  LD         I+     GE AFYGPK 
Sbjct: 415 YRVRLSLRDPEGGKYIADEEKWGRAEGALRAALDAAG------IDYEPAPGEAAFYGPKA 468

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +++ +D +GR+WQ  TIQVDF  P R    YV    E+  PV++HRAV G+ ERF+ ++I
Sbjct: 469 DFMARDVLGREWQLSTIQVDFIQPGRLGCEYVGEDGERHTPVLLHRAVTGTTERFMAVLI 528

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E++ G  P+WLSP+QA+V  +    +EYA+ +   L    L +E D    ++  KIRE++
Sbjct: 529 EHYAGAFPVWLSPVQAVVIPVADRHLEYARRVREELSEGGLRVEVDDSPNSMQKKIRENA 588

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
            +K P ++I GD+E    ++ +RR G    Q
Sbjct: 589 RQKTPYLLIVGDREEEAGTVNVRRRGEGKRQ 619


>gi|329961279|ref|ZP_08299445.1| threonine--tRNA ligase [Bacteroides fluxus YIT 12057]
 gi|328531944|gb|EGF58761.1| threonine--tRNA ligase [Bacteroides fluxus YIT 12057]
          Length = 646

 Score =  507 bits (1305), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 257/629 (40%), Positives = 390/629 (62%), Gaps = 19/629 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           IK+TFPDGS++ +    TG  +AESIS  LA+  +A  +NG++ DL  P+ ++  + +  
Sbjct: 2   IKITFPDGSVREYNEGVTGLQIAESISSRLAQDVLACGVNGEIYDLGRPIMQDAEVVLYK 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
            ED +      H+ AH++AEA+Q ++P +Q  IGP IE+GFYYD D  E      +L  I
Sbjct: 62  WEDEQGKHAFWHTSAHLLAEALQELYPGIQFGIGPAIENGFYYDVDPGEATIKEADLPVI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EKKM E++A+    ++Q ++   A ++F  + E YK E++  +    ++T Y QG + DL
Sbjct: 122 EKKMAELVAKKEAVVRQDIAKADALKMFGDRGETYKCELISEL-EDGHITTYTQGAFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ +   +K   KL  VAGAYWRG  +R M++RIYG  +  ++ L +YL  LEE++
Sbjct: 181 CRGPHLMTIAPIKAI-KLTSVAGAYWRGQEDRKMMTRIYGITFPKKKMLDEYLVLLEEAK 239

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           KRDHRK+ +EMDLF  ++  G G+  W  KG  +   L  ++RR + + DY+E+  P + 
Sbjct: 240 KRDHRKIGKEMDLFMFSDTVGKGLPMWLPKGTALRIRLQDFLRRIQSRYDYQEVMCPPIG 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ L+  SGH+  Y  + F       T ++   + LKPMNCP H  ++ +  +SY++LP+
Sbjct: 300 NKLLYITSGHYAKYGKDSFQ---PIHTPEEGEEYFLKPMNCPHHCMIYKNSPRSYKDLPL 356

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLAEFG+V R E SG LHGL RVR FTQDDAH+FC  +Q+ +E L++ ++I  +++   F
Sbjct: 357 RLAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKDEFLRVMDIISIVFQSMAF 416

Query: 421 EKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           E    ++S R     +K +GSD  W+ AE  +      I+   +  +   V  GE AFYG
Sbjct: 417 ENFEAQISLRDKVNRDKYIGSDENWEKAEQAI------IEACEEKGLKAKVEYGEAAFYG 470

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK ++++KDAIGR WQ GTIQVD+NLP RF   Y  + ++K  PVMIHRA FGS+ERF+ 
Sbjct: 471 PKLDFMVKDAIGRRWQLGTIQVDYNLPERFQLEYTGADNQKHRPVMIHRAPFGSMERFVA 530

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           ++IE+  G  PLWL+P Q  +  I+    +YA E+  LLK + +    D RNE I  KIR
Sbjct: 531 VLIEHTAGKFPLWLTPDQVAILPISEKFNDYALEVKQLLKQYDIRALVDERNEKIGRKIR 590

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFG 625
           ++ +K+IP +++ G+KEA  + I +R+ G
Sbjct: 591 DNEMKRIPYMLVVGEKEAENKEIAVRKQG 619


>gi|289550561|ref|YP_003471465.1| Threonyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01]
 gi|315658055|ref|ZP_07910928.1| threonine--tRNA ligase [Staphylococcus lugdunensis M23590]
 gi|289180093|gb|ADC87338.1| Threonyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01]
 gi|315496945|gb|EFU85267.1| threonine--tRNA ligase [Staphylococcus lugdunensis M23590]
          Length = 645

 Score =  507 bits (1305), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 262/638 (41%), Positives = 394/638 (61%), Gaps = 21/638 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEI 61
           + I + FPDG+ K F    T  ++A+SIS  L KKAVA   N ++ DL+ P+ E G IEI
Sbjct: 2   TKINIQFPDGNKKAFDKGITTEEIAQSISPGLRKKAVAGKFNQQLIDLARPLEEDGEIEI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +TP    +L V+RHS AH+MA A++ ++  VQ  +GP+IE GFYYDFD E   SSD+  +
Sbjct: 62  VTPGSEEALEVLRHSTAHLMANALKRLYGNVQFGVGPVIEGGFYYDFDMENKISSDDFEK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK M++I+  +    ++ +S E+A+E F  K + YK+E++++IP  E VTLY QG++ D
Sbjct: 122 IEKMMKQIVNENHKIERKVVSREEAKEFF--KDDPYKLELIDAIPQDEMVTLYSQGDFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG HV ST ++K+F KL+  AGAYWRGDSN  ML RIYGTA+  +++L  +L  LEE 
Sbjct: 180 LCRGVHVPSTAKIKEF-KLLSTAGAYWRGDSNNKMLQRIYGTAFFDKKDLKAHLQLLEER 238

Query: 242 EKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
            +RDHRK+ ++++LF   +  G+G+  W   G  I + +  Y+  +++   Y+ + TP +
Sbjct: 239 RERDHRKIGKDLELFTNNQLVGAGLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVL 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +  L++ SGHW  YR +MF     D+         L+PMNCP H+ ++ +   SYRELP
Sbjct: 299 ANVDLYRTSGHWAHYRDDMFPPMKLDEN----EEMVLRPMNCPHHMMIYKNKPHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +RLAE G+++R E SG++ GL RVRG T +D+H+F   +Q+ +E  ++ ++I  +YKDFG
Sbjct: 355 IRLAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKDEFKRVVHMIQDVYKDFG 414

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           FE    +LS R     EK +  D +W+ AE+++K  +D +     + I      GE AFY
Sbjct: 415 FEDYTFRLSYRDPEDKEKYMDDDDMWNKAESMLKEAVDELGLPYVEAI------GEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G++    T Q+DF LP RF   Y+ S  E   PV+IHR V  ++ERF+
Sbjct: 469 GPKLDVQVKTAMGKEETLSTAQLDFLLPERFELTYIGSDGEYHRPVVIHRGVVSTMERFV 528

Query: 536 GIMIENFKGNLPLWLSPIQA-IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             + E  KG  P WL+P Q  I+        +YA+ + + LKS  + +E D RNE + YK
Sbjct: 529 AFLTEETKGAFPTWLAPKQVEIIPVNVDLHYDYARNLQDELKSQGVRVEIDDRNEKMGYK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
           IRE  ++KIP  I+ GDKE     + +R++GS   Q +
Sbjct: 589 IREAQMQKIPYQIVVGDKEVENNQVNVRQYGSQDQQTL 626


>gi|154495989|ref|ZP_02034685.1| hypothetical protein BACCAP_00272 [Bacteroides capillosus ATCC
           29799]
 gi|150274872|gb|EDN01928.1| hypothetical protein BACCAP_00272 [Bacteroides capillosus ATCC
           29799]
          Length = 586

 Score =  506 bits (1304), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 259/584 (44%), Positives = 364/584 (62%), Gaps = 15/584 (2%)

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T E+P       H+C+HI+A+AV+ ++PEV++AIGP I++GFYYD D   PF+ + L QI
Sbjct: 9   TFENPEYRKTYWHTCSHILAQAVKRLYPEVKLAIGPSIDEGFYYDMDSPFPFTPEILEQI 68

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M++I        +  L  E+A +  E K E +KVE++  +P   +++ Y+QGE+ DL
Sbjct: 69  EAEMRKICKEKLKLERFELPREEAIKFMEEKGEPFKVELINDLPEDAHISFYKQGEFTDL 128

Query: 183 CRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           C GPH+ STG+VK    KL     AYWRGDSNR  L RIYG A+  ++EL  YL  +EE+
Sbjct: 129 CAGPHLDSTGRVKGNAIKLTACNAAYWRGDSNRETLQRIYGIAFPKKEELDAYLQRIEEA 188

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           +KRDHRKL +E+ LF + ++G G  F+   G  +  TLI Y R+   K  Y EI+TP +L
Sbjct: 189 KKRDHRKLGKELGLFTLMDEGPGFPFFLPNGMVLRNTLIDYWRQIHKKYGYVEISTPMML 248

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ LW++SGHWD Y+ NM+       T+ D   FA+KPMNCPG + V+     SYR+LP+
Sbjct: 249 NRQLWERSGHWDHYKNNMYT------TVIDGEDFAIKPMNCPGGMLVYKTEPHSYRDLPL 302

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+ E G V+R+E SG+LHGL RVR FTQDDAHVF T+EQM +   +   L   +Y  FG 
Sbjct: 303 RVGELGLVHRHELSGALHGLFRVRCFTQDDAHVFMTREQMKDVIQETVRLFDEVYSTFGL 362

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
               ++LST PE  +G+   W+  ++I+K  +  +    +  IN G    +GAFYGPK +
Sbjct: 363 -NYTIELSTMPEDHIGTVEEWERNQDILKNAITDM--GKEFVINEG----DGAFYGPKLD 415

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           + L D++GR WQCGTIQ+D  LP RF   Y  +  EK  PVMIHR V GSIERFIG++ E
Sbjct: 416 FHLADSLGRTWQCGTIQLDSQLPERFELEYTGADGEKHRPVMIHRVVLGSIERFIGVITE 475

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +F G  P WLSP+Q  +  IT    +YA E+  LL+     +E D RNE I  KIRE  +
Sbjct: 476 HFAGAFPAWLSPVQVSILPITDRTAQYADEVKALLEKAGFRVEVDHRNEKIGKKIREAQL 535

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KK+P +++ GDKEA   ++ +R         +SL + I IL +E
Sbjct: 536 KKVPYMLVLGDKEAEGATVAVRNRAGGDQGAMSLDEFINILREE 579


>gi|187250976|ref|YP_001875458.1| threonyl-tRNA synthetase [Elusimicrobium minutum Pei191]
 gi|186971136|gb|ACC98121.1| Threonyl-tRNA synthetase [Elusimicrobium minutum Pei191]
          Length = 583

 Score =  506 bits (1304), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 257/582 (44%), Positives = 366/582 (62%), Gaps = 20/582 (3%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           L   RHS +HIMA+AVQ ++P  ++ IGP IE+GFYYDF+ +  F  ++L  IE KM+EI
Sbjct: 6   LQTARHSLSHIMAQAVQELFPGTRLGIGPAIENGFYYDFESDHKFVPEDLKAIEAKMKEI 65

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
           I    PF  + +   +A + F  K E +KVE++  +    ++++Y  G++ DLC+GPHV 
Sbjct: 66  IKAKQPFACKNMPKAEAVKFFSDKGEHFKVELINEL-EDGSISVYTNGDFVDLCKGPHVE 124

Query: 190 STGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKL 249
            TG++  F KL  +AGAYW+GD  RPML RIYG A+ T+ +L +Y+   EE+ KRDHRKL
Sbjct: 125 HTGKINNF-KLTHIAGAYWKGDEKRPMLQRIYGLAFETKDKLNEYIKQQEEAAKRDHRKL 183

Query: 250 AREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQ 307
             E+DLF I+ED G G+I  H KG  + + +  ++R   IK  Y+ + +P +   HLWQ+
Sbjct: 184 GIELDLFSISEDIGPGLILMHPKGGMLRKVVEDWIRDENIKHGYDLVYSPHIARLHLWQK 243

Query: 308 SGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGS 367
           SGH + Y  NMF     DD     + + LKPMNCP H+A++   L+SYR+LPVRLAE G+
Sbjct: 244 SGHANFYSENMFQPIEVDD-----QQYQLKPMNCPFHIAIYESHLRSYRDLPVRLAELGT 298

Query: 368 VYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKL 427
           VYR E SG +HGL+RVRGFTQDDAH+FCT EQM  E     N  + + K FGFEK  V+L
Sbjct: 299 VYRYERSGVVHGLLRVRGFTQDDAHIFCTPEQMNGEIEDCFNFAMLVMKTFGFEKFSVEL 358

Query: 428 S----TRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           S    T+PE   G    W++A+N ++ VL       ++ +   V  GE AFYGPK +  +
Sbjct: 359 STWDETKPENYTGGKKDWEEAQNALESVL------KKNNVPFTVHAGEAAFYGPKIDIKV 412

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            DAIGR WQ  TIQ DFNLP +F   YV+    K  P+M+HRA+ GSIERF+G++IE++ 
Sbjct: 413 MDAIGRYWQLSTIQFDFNLPQKFELEYVSPEGRK-RPLMVHRALLGSIERFLGVLIEHYA 471

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  PLWL+P+Q  + T+T    ++A+++   +K   L  E D R E +  KIRE  ++KI
Sbjct: 472 GLFPLWLAPVQVKLLTLTDDQFDFAKDVVKQMKLAGLRAELDSRPEKLGLKIREAHVEKI 531

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           P  I+ G KEA  +++ +R       + +S+ D I  L +E+
Sbjct: 532 PYSIVIGAKEAENKTLTLRLRSGKNVEGLSVGDVIAKLKEEA 573


>gi|222151594|ref|YP_002560750.1| threonyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
 gi|222120719|dbj|BAH18054.1| threonyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
          Length = 642

 Score =  506 bits (1303), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 255/644 (39%), Positives = 406/644 (63%), Gaps = 22/644 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           S+I++ FPDG++K+F    T  D+A SIS  L KKA+A   NG++ DLS  +  +G IEI
Sbjct: 2   SEIQIKFPDGNVKSFESGVTTEDIAGSISPGLRKKALAGKFNGQMVDLSTALETDGDIEI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           ITPE P  + V+RHS AH+MA+A++ ++ +V   +GP+IE+GFYYD D E   SS++L +
Sbjct: 62  ITPESPEGIEVLRHSTAHLMAQALKRMYGDVHFGVGPVIEEGFYYDIDTEHKISSEDLPE 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK M++I+  +    ++ +S E+A+++F    + YK+E++++IP  E+VT+Y QGE+ D
Sbjct: 122 IEKTMRQIVGENIKIERRVVSREEAKKIFAD--DPYKMELIDAIPEDEHVTIYSQGEFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG HV ST ++K+F KL+  AGAYWRGD++  ML RIYGTA+  ++ L ++L  LEE 
Sbjct: 180 LCRGVHVPSTAKIKEF-KLLSTAGAYWRGDADNKMLQRIYGTAFFDKKALKEHLKILEER 238

Query: 242 EKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRK+ +E++LF  ++  G+G+  W   G  I + L  Y+  +++   Y+ + TP +
Sbjct: 239 KERDHRKIGKELELFTTSQLVGAGLPLWLPNGATIRRELERYIVDKEVALGYDHVYTPIM 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHWD Y+ +MF     ++         L+PMNCP H+ V+ +   SYRELP
Sbjct: 299 GSVDLYKTSGHWDHYQEDMFPPMEMEN-----EALVLRPMNCPHHMMVYKNKPHSYRELP 353

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG++ GL RVRG T +DAH+F   +Q+  E +++  L+I +YKDF 
Sbjct: 354 IRIAELGMMHRYEASGAVSGLQRVRGMTLNDAHIFVRPDQIKEEFIRVVQLVIDVYKDFK 413

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           F++   +LS R     EK    D +W+ A+ ++K  +D +    ++        GE AFY
Sbjct: 414 FKEYKFRLSYRDSEDTEKYFQDDEMWERAQLMLKEAVDEMGLDYEE------APGEAAFY 467

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G++    T+Q+DF LP RF+  Y+ S  EK  PV+IHR V  ++ERF+
Sbjct: 468 GPKLDVQVKTALGKEETLSTVQLDFLLPERFDLEYIGSDGEKHRPVVIHRGVISTMERFV 527

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
             + E +KG  PLWL+P Q  +  +++    +YA+++ + LKS  +    D R E + YK
Sbjct: 528 AFLTEEYKGAYPLWLAPNQLEIIPVSNEVHYDYARKLYDELKSQGVRCHIDDREEKMGYK 587

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           IRE  + K+P  ++ GDKE     + +R++G   ++ +   D I
Sbjct: 588 IREAQMHKVPYQVVVGDKEIENNEVNVRQYGKKESKTIDRDDFI 631


>gi|94986656|ref|YP_594589.1| threonyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00]
 gi|122988800|sp|Q1MRV8|SYT_LAWIP RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|94730905|emb|CAJ54268.1| Threonyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00]
          Length = 642

 Score =  506 bits (1303), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 259/618 (41%), Positives = 381/618 (61%), Gaps = 19/618 (3%)

Query: 35  AKKAVAVAINGKVCDLSDPVREGSIEII--TPEDPRSLAVIRHSCAHIMAEAVQSIWPEV 92
           +K  V   ING + DL  P+   + E+I  T +    L ++RHS AHI+A AV++++P V
Sbjct: 29  SKNIVGYNINGSIIDLFTPLPTITKEVIPITIDSEDGLEMLRHSAAHILAAAVKNLFPTV 88

Query: 93  QVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFES 152
           +++IGP IE+GFYYDFD E+PF+ ++   IE +MQ II    PF +  +S  +A E F S
Sbjct: 89  KISIGPSIENGFYYDFDAERPFTPEDFPAIEAEMQRIINESIPFERIEISKAEALEFFSS 148

Query: 153 KKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDS 212
             E YKVEI+ S+    N+TLYR G + DLC+GPHV +T  +K F KL+ VAGAYWRG+ 
Sbjct: 149 LHENYKVEIINSL-EDGNITLYRIGNFTDLCKGPHVPNTNFIKAF-KLLSVAGAYWRGNE 206

Query: 213 NRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRK 271
           N  MLSRIY TA+  ++ L  YL  LEE+++RDHRKL +E++LF   ED   G++FW   
Sbjct: 207 NNQMLSRIYATAFPNKKLLKTYLTQLEEAKRRDHRKLGKELNLFEFHEDIAPGMVFWQPN 266

Query: 272 GWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G  +   L  ++R++ +K  Y+ +  PQ+L + LW++SGH+ +Y+ NM+  +  +D    
Sbjct: 267 GMLLRTILEDFLRKEHLKRGYQLVQGPQLLRRELWEKSGHYTNYKENMYFTEIEEDV--- 323

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
              + +KPMNC  H+ ++   L SYRELP R  E G V+R+E SG LHGL+RVR FTQDD
Sbjct: 324 ---YGIKPMNCVSHMLLYKTHLHSYRELPQRYFELGVVHRHEKSGVLHGLLRVRQFTQDD 380

Query: 391 AHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKG 450
           AH+ C  EQ+  E +++   +  +   F F   +V +STRPEK +GSD  W+ A + +  
Sbjct: 381 AHIICMPEQLEEEIIQVITFVRDLMSLFDFNYHIV-ISTRPEKSIGSDYAWELATSALIQ 439

Query: 451 VLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFY 510
            ++ I       +   +  G+GAFYGPK +  + DAIGR+WQ  TIQ DF LP RF   Y
Sbjct: 440 AVEKIN------LPYSINHGDGAFYGPKIDIKVTDAIGREWQLSTIQCDFTLPERFELEY 493

Query: 511 VNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQE 570
           V    ++  PVMIHRA+FGSIERFIGI+ E++ G  P WL+PIQ  + T+T +   +A+ 
Sbjct: 494 VGQDGKRHQPVMIHRAIFGSIERFIGILTEHYAGAFPTWLTPIQVKILTVTDAQTPFAKH 553

Query: 571 IANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
           + + L+   + +  D RNE + +KIRE  + KIP I++ G KE    S+ +R        
Sbjct: 554 VYSQLQDVGIRVGLDIRNEKLGFKIREAQLAKIPYILVIGQKELELESVNVRLRTGENIG 613

Query: 631 KVSLLDAIPILTKESLPP 648
             S+ + I ++  + + P
Sbjct: 614 MQSVTEFIKLVENDCIQP 631


>gi|296124433|ref|YP_003632211.1| threonyl-tRNA synthetase [Planctomyces limnophilus DSM 3776]
 gi|296016773|gb|ADG70012.1| threonyl-tRNA synthetase [Planctomyces limnophilus DSM 3776]
          Length = 736

 Score =  506 bits (1303), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 273/709 (38%), Positives = 407/709 (57%), Gaps = 73/709 (10%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS--- 58
           PS +++  PDGS+K FP   T   +AESIS  LA+ A+A  +  KV DL  PV E +   
Sbjct: 8   PSVVQIQLPDGSVKEFPGDVTPLAIAESISPRLAQAAIAARVGEKVTDLKRPVSETTDVQ 67

Query: 59  ---IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFS 115
              ++I+T +D  SL V+RHSCAH+MA A+  ++P VQ+A GP+ + G+YYD D     S
Sbjct: 68  PVPVQILTEKDAASLGVLRHSCAHLMARAIMRVFPGVQLAFGPVKDQGYYYDLDLPHKLS 127

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE-SIPAKENVTLY 174
            D+ A+IE +MQ+++    PF +   + ++A  + E   +  K E ++  + ++  V+ Y
Sbjct: 128 EDDFARIEAEMQKLVEMAEPFERFITNRDEALAMLEGMGQKLKCEHIQIGLASEATVSFY 187

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
           RQGE+ DLCRGPH+   G++K F +L+ VAGAYW+GD++   L R+YGTAW +Q++L  +
Sbjct: 188 RQGEFVDLCRGPHIPDAGRIKAF-RLLSVAGAYWKGDASGQQLQRVYGTAWFSQKDLDAH 246

Query: 235 LYFLEESEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYE 292
           L  + E+++RDHR L ++++LF I+ E G+G+  W  KG  +   L  +++ ++ K  Y+
Sbjct: 247 LEQVNEAKRRDHRVLGKQLNLFSISPEVGAGLCLWLPKGATVRALLEEFIKGELLKRGYQ 306

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMF----------------------AVKCADDT--- 327
            + TP +    L++ SGH+  YR + F                      A+  AD+    
Sbjct: 307 PVYTPHIGRVELYETSGHFPYYRDSQFTPLYGHDGGQLIDFWIRKLQDNAISEADEKSLL 366

Query: 328 ----------------------IKDLRT-------FALKPMNCPGHVAVFNHGLKSYREL 358
                                 I+ LRT       + LKPMNCP H  ++    +SYR+L
Sbjct: 367 ASAKILGVEIPEYAAASGNPAKIEVLRTWEKQQERYLLKPMNCPHHAQIYKSMQRSYRDL 426

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           PVRLAEFG+VYR+E SG L+G++RVRG TQDDAH+FCT EQ+  E      L+  +    
Sbjct: 427 PVRLAEFGTVYRHEQSGELNGMLRVRGLTQDDAHLFCTPEQVEEEFRATLQLVQFVLASV 486

Query: 419 GFEKIMVKLSTR---PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           G E   V+LS R    +K VGS+  W  AE  ++GVL  +      R       GE AFY
Sbjct: 487 GLEDYRVQLSLRDPKSDKYVGSEENWQRAEASLRGVLTELNLPFTAR------EGEAAFY 540

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KD IGR+WQ GT+Q+D+NLP RF   YV + ++   PVMIHRA FGS+ERF 
Sbjct: 541 GPKADFMVKDCIGREWQLGTVQLDYNLPERFQLEYVGADNQAHRPVMIHRAPFGSMERFT 600

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
           G++IE+F G  PLWL+P Q  V +I+     YA+E+    ++    + TD R   IN KI
Sbjct: 601 GMLIEHFAGAFPLWLAPEQVRVLSISDKFEGYAREVEREFRAAGFRVTTDLRGAKINGKI 660

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R+  I+ IP +++ G K+   R++ IR         V L +AI  L +E
Sbjct: 661 RDAQIELIPYMLVVGGKDQENRTVSIRDRIEGDLGAVPLAEAITRLQQE 709


>gi|255008477|ref|ZP_05280603.1| putative threonyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
 gi|313146205|ref|ZP_07808398.1| threonine-tRNA ligase [Bacteroides fragilis 3_1_12]
 gi|313134972|gb|EFR52332.1| threonine-tRNA ligase [Bacteroides fragilis 3_1_12]
          Length = 646

 Score =  506 bits (1302), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 260/648 (40%), Positives = 395/648 (60%), Gaps = 19/648 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+TFPDGS++ +     G  +AESIS  LA+  +A  +NG++ DL  P+ E  S+ +  
Sbjct: 2   IKITFPDGSVREYNEGVNGLQIAESISSRLAQDVLACGVNGEIYDLGRPINEDASVVLYK 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
            ED +      H+ AH++AEA+Q ++P +Q  IGP IE+GFYYD D  E      +L  I
Sbjct: 62  WEDEQGKHAFWHTSAHLLAEALQELYPGIQFGIGPAIENGFYYDVDPGEAVIKESDLPAI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E KM E++A+    +++ ++   A ++F  + E YK E++  +    ++T Y QG++ DL
Sbjct: 122 EAKMAELVAKKEVVVRRDIAKNDALKMFGDRGETYKCELISEL-EDGHITTYTQGDFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ +T  +K   KL  VAGAYWRG  +R ML+RIYG  +  ++ L +YL  +EE++
Sbjct: 181 CRGPHLMTTAPIKAI-KLTSVAGAYWRGHEDRKMLTRIYGITFPKKKMLDEYLALMEEAK 239

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           KRDHRK+ +EM LF  ++  G G+  W  KG  +   L  ++RR + + DY+E+ TP + 
Sbjct: 240 KRDHRKIGKEMQLFMFSDTVGKGLPMWLPKGTALRLRLQDFLRRIQTRYDYQEVITPPIG 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ L+  SGH+  Y  + F       T ++   + LKPMNCP H  ++ +  +SY++LP+
Sbjct: 300 NKLLYVTSGHYAKYGKDAFQ---PIHTPEEGEEYFLKPMNCPHHCEIYKNFPRSYKDLPL 356

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AEFG+V R E SG LHGL RVR FTQDDAH+FC  +Q+  E L++ ++I  +++   F
Sbjct: 357 RIAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKGEFLRVMDIISIVFRSMDF 416

Query: 421 EKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
                ++S R     EK +GSD  W+ AE  +      I+   +  +   +  GE AFYG
Sbjct: 417 TNFEAQISLRDKVNREKYIGSDENWEKAEQAI------IEACEEKGLKAKIEYGEAAFYG 470

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK ++++KDAIGR WQ GTIQVD+NLP RF   Y+ S ++K  PVMIHRA FGS+ERF+ 
Sbjct: 471 PKLDFMVKDAIGRRWQLGTIQVDYNLPERFELEYMGSDNQKHRPVMIHRAPFGSMERFVA 530

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           ++IE+  G  PLWL+P Q ++  I+    EYA+++   LK+  +    D RNE I  KIR
Sbjct: 531 VLIEHTAGKFPLWLTPEQVVILPISEKFNEYAEKVKTYLKTKEIRAIVDDRNEKIGRKIR 590

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           ++ +K+IP ++I G+KEA    + +RR G      +   D   IL +E
Sbjct: 591 DNEMKRIPYMLIVGEKEAENGEVSVRRQGEGDKGTMKFEDFGEILNEE 638


>gi|226355500|ref|YP_002785240.1| threonyl-tRNA synthetase [Deinococcus deserti VCD115]
 gi|259516378|sp|C1D0W2|SYT_DEIDV RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|226317490|gb|ACO45486.1| putative threonine--tRNA ligase (threonyl-tRNA synthetase)
           [Deinococcus deserti VCD115]
          Length = 649

 Score =  506 bits (1302), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 257/632 (40%), Positives = 390/632 (61%), Gaps = 27/632 (4%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           + +  PDG     P+ AT  D A +I   LA+ A+A   NG++ DL  P+ +G SI +IT
Sbjct: 1   MHVVLPDGKQLELPMGATALDAASAIGPRLAQDALAATANGELVDLMTPLPDGASITLIT 60

Query: 64  PEDPRSLA-VIRHSCAHIMAEAVQSIW-------PEVQVAIGPIIEDGFYYDFDKEQPFS 115
            ++P   A + RHS  H+M++AV   +         ++  +GP IE+G+Y DFD  +P  
Sbjct: 61  KKNPGDAAPLFRHSLGHVMSQAVGEYYRAKGYSDDRIKRGVGPSIENGWYQDFDLPEPLR 120

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            ++L +IEK M+EI++R+  F ++ +S  KA  L +   + YK E+++ +P  E +T Y+
Sbjct: 121 EEDLPEIEKIMREILSRNLAFRRREVS--KAEGLAQFPHDPYKQELIQGLPDDEPITFYQ 178

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
           QG++ DLCRGPH  STG++   FKLM  +GAYWRG+   P+L R+YG A+ +Q+EL +YL
Sbjct: 179 QGDYVDLCRGPHFPSTGRLPGAFKLMSTSGAYWRGNEKNPILQRVYGVAFASQKELDEYL 238

Query: 236 YFLEESEKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEE 293
           + LEE+++RDHRKL RE++LF I    G G+  W   G  + + L  +++ ++ +  Y+ 
Sbjct: 239 HQLEEAKRRDHRKLGRELELFTIDPLVGKGLPLWLPNGTVLREELAGFLKEQQFRRGYQG 298

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           + TP + +  L++ SGH+  Y    F     DD       + LKPMNCP HV ++    +
Sbjct: 299 VITPNIGNLELYKTSGHYPYYADGQFNPIEVDD-----EQYMLKPMNCPHHVRIYASKPR 353

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYR+LPVRLAEFG+VYR E SG L+GL RVRGFTQDDAH+FC  +Q+  E L + +L + 
Sbjct: 354 SYRDLPVRLAEFGTVYRYEQSGELNGLTRVRGFTQDDAHLFCRPDQLKKEFLDVLDLTVL 413

Query: 414 IYKDFGFEKIMVKLSTR-PE--KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
           + K FG   +  ++ TR PE  K VG +A W+ AE  +   +D +       +   +  G
Sbjct: 414 VLKTFGMNDVRFRVGTRDPESDKYVGDEANWELAERQILEAVDEVG------LPYTIEPG 467

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           + AFYGPK ++++KD +GR+WQ GTIQVD+NLP RF+  YV    +   P+MIHRA FGS
Sbjct: 468 DAAFYGPKLDFVVKDVLGREWQLGTIQVDYNLPERFDISYVGEDGQDHRPIMIHRAPFGS 527

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
           +ERF+GI+IE++ G+ PLWL+P Q ++  I     EYA+E+ + L +  L  E D  +  
Sbjct: 528 LERFVGILIEHYAGDFPLWLAPRQVMIIPIADRHNEYAEELRSELHAAGLRAEVDDSSNR 587

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           +  K+R   + KIP+++I GDKE   R + +R
Sbjct: 588 MQAKVRTAELSKIPVMLIVGDKEQEARQVSVR 619


>gi|313205743|ref|YP_004044920.1| ser-tRNA(thr) hydrolase; threonyl-tRNA synthetase [Riemerella
           anatipestifer DSM 15868]
 gi|312445059|gb|ADQ81414.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Riemerella
           anatipestifer DSM 15868]
 gi|315022861|gb|EFT35885.1| threonyl-tRNA synthetase [Riemerella anatipestifer RA-YM]
          Length = 641

 Score =  506 bits (1302), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 266/649 (40%), Positives = 401/649 (61%), Gaps = 21/649 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           +K+T PDGSI+ F    T  +VA+SIS  LA+  ++  +N K  +++ P+ E  +++++T
Sbjct: 2   VKITLPDGSIREFEGVVTPLEVAKSISEGLARNTISAMVNNKQVEVTTPITEDATVQLLT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQI 122
             D        HS AH++A+A+ + +P  ++ IGP IE+GFYYD D  ++  S  +  +I
Sbjct: 62  WNDDMGKKAFWHSSAHLLAQAILAYYPNAKLTIGPAIENGFYYDVDFGDETLSEKDFEKI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E+KM E   +DS F    +S  KA  L E     YK E++E++   E +T     ++ DL
Sbjct: 122 EQKMLENAKKDSTFKLYAIS--KAEALKEYADNPYKTELIENLNDGE-ITFCSHDDFTDL 178

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRG H+ STG VK   K++  AGAYWRGD   P L+R+YG ++  Q++L +YL  LEE++
Sbjct: 179 CRGGHIPSTGIVKAV-KILNAAGAYWRGDEKNPQLTRVYGISFPKQKDLKEYLERLEEAK 237

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           +RDHRKL +E+ LF  +E  G+G+  W  KG  + + L S++   + K  YE + TP + 
Sbjct: 238 RRDHRKLGKELGLFTFSEKVGAGLPLWLPKGAALRKKLESFLSEAQRKGGYEFVMTPHIG 297

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  L++ SGH++ Y A+ F       T      F LKPMNCP H  V+     SY++LP 
Sbjct: 298 NIELYKTSGHYEKYGADSFQ---PIKTPHVGEEFLLKPMNCPHHCEVYKAQQWSYKDLPK 354

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R AEFG+VYR E SG LHGL RVRGFTQDDAH+FCT +Q+  E  K+ +L++ ++K  GF
Sbjct: 355 RYAEFGTVYRYEQSGELHGLTRVRGFTQDDAHLFCTPDQLLEEFEKVIDLVLYVFKSLGF 414

Query: 421 EKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           E  + ++S R +    K +GS+  W+ AE+    ++   KN     +NT V  GE AFYG
Sbjct: 415 EDFIAQVSLRDKENRAKYIGSEENWEKAES---AIITAAKNKG---LNTVVEYGEAAFYG 468

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK ++++KDA+GR WQ GTIQVD+NLP RF+  YV S +E+  P+MIHRA FGS+ERFI 
Sbjct: 469 PKLDFMVKDALGRSWQLGTIQVDYNLPERFDLTYVGSDNERHRPIMIHRAPFGSMERFIA 528

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           I+IEN  G+ PLWL+P Q I+  I+    +YA++++ LL++H +    D RNE    KIR
Sbjct: 529 ILIENTAGDFPLWLNPDQYILLPISEKYTDYAKKVSQLLENHDICGLVDERNEKTGKKIR 588

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           +  +KKIP ++I G+ EA  +++ +R+ G     ++S+   +     E+
Sbjct: 589 DAEMKKIPFMLIVGENEAGNQTVSVRKRGEGDLGEMSIESFVEYFKNEA 637


>gi|168012416|ref|XP_001758898.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162690035|gb|EDQ76404.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 613

 Score =  505 bits (1301), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 256/599 (42%), Positives = 381/599 (63%), Gaps = 21/599 (3%)

Query: 29  SISRSLAKKAVAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSI 88
           SI+ S A++   ++   +V  + +  +   I + T E    L  IRH+ AH++A AVQ +
Sbjct: 2   SIASSAAEQQTTISAESEVKIVEEEKK--PIVLPTNESSEKLLKIRHTSAHVLAMAVQKL 59

Query: 89  WPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE 148
           +P+ QV IGP IE GFYYDFDKE+PF+  +L +I+K+M  II+R+ P  ++ ++ E+A +
Sbjct: 60  FPDAQVTIGPWIEKGFYYDFDKEEPFTETDLKKIKKEMDRIISRNLPLTREEVAKEEAEK 119

Query: 149 LFESKKEAYKVEILESIPAKENVTLYRQGE-WFDLCRGPHVRSTGQV-KKFFKLMKVAGA 206
             ++  E YK+EILE I   E +T+Y+ GE W+DLC GPH+  TGQ+ K+  +L  VAGA
Sbjct: 120 RIKAINEPYKLEILEGIKT-EPITIYKIGEEWWDLCAGPHLERTGQLDKRAIELEFVAGA 178

Query: 207 YWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGV 265
           YWRGD  + ML RIYGTAW ++++L  Y    EE+++RDHR+L ++++LF I ED G G+
Sbjct: 179 YWRGDEKKQMLQRIYGTAWESEEQLKAYQVQKEEAKRRDHRRLGQDLNLFSIQEDAGGGL 238

Query: 266 IFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCA 324
           +FWH KG  +   +  Y ++    + YE + TP +    LW+ SGH++ Y+ NMF     
Sbjct: 239 VFWHPKGSMVRHIIEDYWKKMHFANGYELLYTPHIAKLDLWKTSGHYEFYKENMF----- 293

Query: 325 DDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVR 384
           D    +   + ++PMNCP H+ V+   L+SYRELP+R+AE G+VYR E SG+LHGL RVR
Sbjct: 294 DQMRIEEELYQIRPMNCPFHIQVYKDSLRSYRELPMRVAELGTVYRYERSGALHGLFRVR 353

Query: 385 GFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
           GFTQDD H+FC  +Q+ +E   + +L   + K FGF K  + LST+PEK VGS  +W+ +
Sbjct: 354 GFTQDDGHIFCLPDQIRDEIRGVLDLTEIVLKQFGFTKFEINLSTKPEKAVGSHEIWEKS 413

Query: 445 ENIMKGVLDTIKNSSQDR-INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLP 503
              ++  L       QD+     +  G GAFYGPK +  ++DAIGR WQC TIQVDFNLP
Sbjct: 414 TTALREAL-------QDKGWEYSIDEGGGAFYGPKIDVKIEDAIGRKWQCSTIQVDFNLP 466

Query: 504 SRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSS 563
            RFN  YV++ + +  P++IHRA+ GSIERF GI++EN+ G+ PLWL+P+QA +  +T  
Sbjct: 467 ERFNMVYVDTDTSRKQPILIHRAILGSIERFFGILVENYAGDFPLWLAPVQARLLPVTDH 526

Query: 564 AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
            V+Y + +   L+   +  E  F  E +   IR    +KIP++ + G KE    ++ +R
Sbjct: 527 EVDYCKNVVAKLREKGIRAEVVF-GERLGKLIRNAETQKIPVMAVVGPKEVESATLTVR 584


>gi|198275235|ref|ZP_03207766.1| hypothetical protein BACPLE_01394 [Bacteroides plebeius DSM 17135]
 gi|198271818|gb|EDY96088.1| hypothetical protein BACPLE_01394 [Bacteroides plebeius DSM 17135]
          Length = 646

 Score =  505 bits (1301), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 258/629 (41%), Positives = 389/629 (61%), Gaps = 19/629 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIEIITP 64
           +K+TFPDGS++ +    TG  +AESIS  LA+  +A  +NG+  DL+ P+ E +  ++  
Sbjct: 2   VKITFPDGSVREYNEGVTGLQIAESISSRLAQDVLACGVNGETVDLNRPINEDANFVLYK 61

Query: 65  -EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
            ED +      H+ AH++AEA+Q ++P +Q  IGP IE+GFYYD D  E      +L  I
Sbjct: 62  WEDEQGKHAFWHTSAHLLAEALQELYPGIQFGIGPAIENGFYYDVDPGEAVIKEGDLPAI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EKKM E+ A+    ++Q +S E A ++F  + E YK E++  +    +++ Y QG + DL
Sbjct: 122 EKKMAELAAKKEELVRQSISKEDALKMFGDRGETYKCELISEL-EDGHISTYTQGAFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ ST  +K   KL+ VAGAYWRG  +R  ++RIYG  +  ++ L +YL  LEE++
Sbjct: 181 CRGPHLLSTAPIKAI-KLLSVAGAYWRGQEDRKQMTRIYGITFPKKKMLDEYLVMLEEAK 239

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           KRDHRK+ +EMDLF  ++  G G+  W  KG  +   L  ++RR + + DY+E+  P + 
Sbjct: 240 KRDHRKIGKEMDLFMFSDTVGKGLPMWLPKGTALRIRLQDFLRRIQARYDYQEVMCPPIG 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ L+  SGH+  Y  + F       T ++   + LKPMNCP H  ++ +  +SYR+LP+
Sbjct: 300 NKLLYVTSGHYAKYGKDAFQ---PIHTPEEGEEYFLKPMNCPHHCMIYKNSPRSYRDLPL 356

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AEFG+V R E SG LHGL RVR FTQDDAH+FC  +Q+ +E L++ ++I  ++   G 
Sbjct: 357 RIAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKDEFLRVMDIISIVFTSMGL 416

Query: 421 EKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           E    ++S R     EK +GSD  W+ AE  +      ++   +  +   V  GE AFYG
Sbjct: 417 ENFEAQISLRDKENREKYIGSDENWEKAEQAI------VEACEEKGLKAKVEYGEAAFYG 470

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK ++++KDAIGR WQ GTIQVD+NLP RF   Y+ S ++K  PVMIHRA FGS+ERF+ 
Sbjct: 471 PKLDFMVKDAIGRRWQLGTIQVDYNLPERFQLEYMGSDNQKHRPVMIHRAPFGSMERFVA 530

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           ++IE+  G  PLWL+P Q  +  I+    +YA ++   LK + +    D RNE I  KIR
Sbjct: 531 VLIEHTAGKFPLWLTPDQVAILPISEKFNDYADKVRMELKKYDVRALVDDRNEKIGRKIR 590

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFG 625
           ++ +K+IP ++I G+KEA    + +R+ G
Sbjct: 591 DNEMKRIPYMLIVGEKEAENGEVAVRKQG 619


>gi|313159213|gb|EFR58586.1| threonine--tRNA ligase [Alistipes sp. HGB5]
          Length = 650

 Score =  505 bits (1300), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 257/652 (39%), Positives = 398/652 (61%), Gaps = 21/652 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+TFPDGS++ +    T   +AESIS  LA  ++A ++NG   D++ P+ E  S++   
Sbjct: 2   IKITFPDGSVREYAEGTTAYQIAESISPRLAADSLAASVNGATVDMTRPIGEDASVKFYK 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D        H+ +H++AEA+++++P ++  IGP IE+GFYYD D   P +  +L +IE
Sbjct: 62  WDDEEGKHAFWHTSSHLLAEALEALYPGIKFGIGPAIENGFYYDVDSPTPITEADLPKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           +KMQE+       +++ +   +A + F  K + YKVE++  +     ++ Y  G + DLC
Sbjct: 122 QKMQELSRNKEQLVRREVPKAEALKTFTEKGDQYKVELISDL-QDGTISFYTNGAFTDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ +TG +K   KL  VAGAYWRG+    ML+RIYG ++  +  L +YL  +EE++K
Sbjct: 181 RGPHIPNTGYIKAL-KLTSVAGAYWRGNEKNKMLTRIYGISFPKKSMLDEYLVMMEEAKK 239

Query: 244 RDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           RDHRKL ++++LF  ++  G G+  W  KG  +   L  ++R   K+  Y+++ TP + +
Sbjct: 240 RDHRKLGKDLELFCFSQRVGQGLPLWLPKGAALRDRLEQFLRNVQKEYGYQQVITPHIGN 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + L+  SGH+  Y  + F       T  +   + LKPMNCP H  ++    +SY+ELPVR
Sbjct: 300 KELYVTSGHYAKYGKDSFQ---PIHTPIEGEEYLLKPMNCPHHCEIYRSKPRSYKELPVR 356

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFG+VYR E SG LHGL RVRGFTQDDAH+F   +Q+  E  ++ ++++ I+K   F+
Sbjct: 357 LAEFGTVYRYEQSGELHGLTRVRGFTQDDAHLFVRPDQLLEEFERVIDIVLYIFKTLKFD 416

Query: 422 KIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
               ++S R     EK +GSD  W+ AE+ +      ++ + +  +NT V  GE AFYGP
Sbjct: 417 NYTAQISLRDPNNKEKYIGSDENWEKAESAI------MQAAEEKGLNTVVEYGEAAFYGP 470

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K ++++KDAIGR WQ GTIQVD+NLP RF+  Y  +  +   P+MIHRA FGS+ERF+ +
Sbjct: 471 KLDFMVKDAIGRKWQLGTIQVDYNLPERFDLTYKGADDKLHRPIMIHRAPFGSMERFVAV 530

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           ++E+  G  PLWLSP Q +V  I+    +YAQ++A  L    +  E D RNE I  KIR+
Sbjct: 531 LLEHTGGKFPLWLSPQQVVVLPISEKFNDYAQQVAEYLNRSDVRTEVDDRNEKIGRKIRD 590

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL---LDAIPILTKESL 646
           + +K+IP ++I G+KE +E  + +R  G     +++L    D I  L KE +
Sbjct: 591 NELKRIPYLLIVGEKEEAEGLVSVRAQGEGDKGQMTLEGFRDFIAGLVKEEI 642


>gi|319902630|ref|YP_004162358.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Bacteroides
           helcogenes P 36-108]
 gi|319417661|gb|ADV44772.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Bacteroides
           helcogenes P 36-108]
          Length = 646

 Score =  504 bits (1299), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 255/629 (40%), Positives = 390/629 (62%), Gaps = 19/629 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           IK+TFPD S++ +    TG  +AESIS  LA+  +A  +NG++ DL  P+ ++  + +  
Sbjct: 2   IKITFPDSSVREYNEGVTGLQIAESISSRLAQDVLACGVNGEIYDLGRPIMQDAEVVLYK 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
            ED +      H+ AH++AEA+Q ++P +Q  IGP IE+GFYYD D  E      +L  I
Sbjct: 62  WEDEQGKHAFWHTSAHLLAEALQELYPGIQFGIGPAIENGFYYDVDPGEATIKEADLPVI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EKKM E++AR    +++ ++   A ++F  + E YK E++  +    ++T Y QG + DL
Sbjct: 122 EKKMAELVARKEAVVRKDIAKADALKMFGGRGETYKCELISEL-EDGHITTYTQGAFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ +T  +K   KL  VAGAYWRG  +R M++RIYG  +  ++ L +YL  LEE++
Sbjct: 181 CRGPHLMTTAPIKAI-KLTSVAGAYWRGQEDRKMMTRIYGITFPKKKMLDEYLVLLEEAK 239

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           KRDHRK+ +EMDLF  ++  G G+  W  KG  +   L  ++RR + + DY+E+  P + 
Sbjct: 240 KRDHRKIGKEMDLFMFSDTVGKGLPMWLPKGTALRIRLQDFLRRIQARYDYQEVMCPPIG 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ L+  SGH+  Y  + F       T ++   + LKPMNCP H  ++ +  +SY++LP+
Sbjct: 300 NKLLYITSGHYAKYGKDSFQ---PIHTPEEGEEYFLKPMNCPHHCMIYKNSPRSYKDLPL 356

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLAEFG+V R E SG LHGL RVR FTQDDAH+FC  +Q+ +E L++ ++I  +++   F
Sbjct: 357 RLAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKDEFLRVMDIISIVFQSMDF 416

Query: 421 EKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           E    ++S R     +K +GSD  W+ AE  +      I+   +  +   +  GE AFYG
Sbjct: 417 ENFEAQISLRDKVNRDKYIGSDENWEKAEQAI------IEACEEKGLKARIEYGEAAFYG 470

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK ++++KDAIGR WQ GTIQVD+NLP RF   Y  + ++K  PVM+HRA FGS+ERF+ 
Sbjct: 471 PKLDFMVKDAIGRRWQLGTIQVDYNLPERFQLEYTGADNQKHRPVMVHRAPFGSMERFVA 530

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           ++IE+  G  PLWL+P Q  +  I+    +YAQE+   LK + +    D RNE I  KIR
Sbjct: 531 VLIEHTAGKFPLWLTPDQVAILPISEKFNDYAQEVKLFLKKYDIRAIVDERNEKIGRKIR 590

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFG 625
           ++ +K+IP +++ G+KEA  + I +R+ G
Sbjct: 591 DNEMKRIPYMLVVGEKEAENKEIAVRKQG 619


>gi|265751997|ref|ZP_06087790.1| threonyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
 gi|263236789|gb|EEZ22259.1| threonyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
          Length = 646

 Score =  504 bits (1299), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 260/629 (41%), Positives = 389/629 (61%), Gaps = 19/629 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIEIITP 64
           IK+TFPDGS++ +    TG  +AESIS  LA+  +A  +NG+  DLS P+ E +  ++  
Sbjct: 2   IKITFPDGSVREYNEGVTGLQIAESISSRLAQDVLACGVNGETIDLSRPINEDANFVLYK 61

Query: 65  -EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
            ED +      H+ AH++AEA+Q ++P +Q  IGP IE+GFYYD D  E      +L  I
Sbjct: 62  WEDEQGKHAFWHTSAHLLAEALQELYPGIQFGIGPAIENGFYYDVDPGEAIIKEADLPAI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E KM E+ A+    ++Q ++ E A + F  + E YK E++  +    ++T Y QG + DL
Sbjct: 122 EAKMAELAAKKEILVRQSIAKEDALKKFGERGETYKCELISEL-EDGHITTYTQGAFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ ST  +K   KL+ VAGAYWRG  +R  ++RIYG  +  ++ L +YL  LEE++
Sbjct: 181 CRGPHLTSTAPIKAI-KLLSVAGAYWRGQEDRKQMTRIYGITFPKKKMLDEYLVMLEEAK 239

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           KRDHRK+ +EMDLF   +  G G+  W  KG  +   L  ++RR + + DY+E+  P + 
Sbjct: 240 KRDHRKIGKEMDLFMFTDMVGKGLPMWLPKGTALRIRLQDFLRRIQARYDYQEVMCPPIG 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +++L+  SGH+  Y  + F       T ++   + LKPMNCP H  ++ +  +SY++LP+
Sbjct: 300 NKNLYITSGHYAKYGKDSFQ---PIHTPEEGEEYFLKPMNCPHHCMIYKNSPRSYKDLPL 356

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AEFG+V R E SG LHGL RVR FTQDDAH+FC  +Q+  E L++ ++I  ++K   F
Sbjct: 357 RIAEFGTVCRYEQSGELHGLTRVRSFTQDDAHLFCRPDQVKEEFLRVMDIINIVFKSMNF 416

Query: 421 EKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           E +  ++S R     EK +GSD  W+ AE  +      I+   +  +   V  GE AFYG
Sbjct: 417 ENVEAQISLRDKVNREKYIGSDENWEKAEQAI------IEACEEKGLTAKVEYGEAAFYG 470

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK ++++KDAIGR WQ GTIQVD+NLP RF   Y+ S ++K  PVMIHRA FGS+ERF+ 
Sbjct: 471 PKLDFMVKDAIGRRWQLGTIQVDYNLPERFQLEYMGSDNQKHRPVMIHRAPFGSMERFVA 530

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           ++IE+  G  PLWL+P Q  +  I+    EYA+++   L+ + +    D RNE I  KIR
Sbjct: 531 VLIEHTAGKFPLWLTPDQVAILPISEKFNEYAEKVKAELRKYDVRAIVDDRNEKIGRKIR 590

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFG 625
           ++ +K+IP ++I G+KEA    + +R+ G
Sbjct: 591 DNEMKRIPYMLIVGEKEAENGEVAVRKQG 619


>gi|94985607|ref|YP_604971.1| threonyl-tRNA synthetase [Deinococcus geothermalis DSM 11300]
 gi|123079875|sp|Q1IY82|SYT_DEIGD RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|94555888|gb|ABF45802.1| threonyl-tRNA synthetase [Deinococcus geothermalis DSM 11300]
          Length = 649

 Score =  504 bits (1299), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 256/632 (40%), Positives = 385/632 (60%), Gaps = 27/632 (4%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           + +T PDG   +    AT  DVA ++   LA+ A+A  +NG++ DL  P+ EG+ + +IT
Sbjct: 1   MHVTLPDGKQLDLQAGATALDVARALGPRLAQDALAALVNGELMDLMTPLPEGAQVRLIT 60

Query: 64  PEDPRSLA-VIRHSCAHIMAEAVQSIWPE-------VQVAIGPIIEDGFYYDFDKEQPFS 115
            ++P   A V RHS  H++++AV   +         V+  +GP IE+GFY DFD  +P  
Sbjct: 61  KKNPGDAAPVFRHSLGHVLSQAVGEFYQRKGYPREAVKRGVGPAIENGFYQDFDLPEPLK 120

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            ++L +IE  M+EII R    ++Q +   KA  L     + YKVE+++ +P  E VT Y 
Sbjct: 121 EEDLPEIEAIMREIIGRGLDIVRQDVG--KAAALKHFSYDPYKVELIQELPENEPVTFYA 178

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
           QG++ DLCRGPH  +TG++   FKLM  +GAYWRG+   P+L R+YG A+ TQ+EL +YL
Sbjct: 179 QGDYVDLCRGPHFPNTGKLPGAFKLMSTSGAYWRGNEKNPILQRVYGVAFATQKELDEYL 238

Query: 236 YFLEESEKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEE 293
             LEE+ +RDHRKL RE++LF I    G G+  W   G  + + L  ++R ++ + DY+ 
Sbjct: 239 ERLEEARRRDHRKLGRELELFLIDPLVGKGLPMWLPNGTVLREELTRFLREQQFQRDYQG 298

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           + TP + +  L++ SGH+  Y  + F     D+       + LKPMNCP H+ ++    +
Sbjct: 299 VVTPNIGNLDLFRTSGHYPYYSDSQFEPLSVDE-----EQYMLKPMNCPFHIRIYASKPR 353

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYR+LPVRLAEFG+VYR E SG L+GL RVRGFTQDDAH+F   +Q+  E L + +L + 
Sbjct: 354 SYRDLPVRLAEFGTVYRYEMSGELNGLTRVRGFTQDDAHIFARPDQLKKEFLDVLDLTVL 413

Query: 414 IYKDFGFEKIMVKLSTR---PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
           + K FG   +  ++  R    +K VG  A W+ AE   + +++ ++      +   V  G
Sbjct: 414 VLKTFGMNDVRFRVGVRDPASDKYVGDPAQWEVAE---RQIIEAVEEVG---LPYTVEPG 467

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           + AFYGPK ++++KD +GR+WQ GTIQVD+NLP RF+  Y     ++  PVMIHRA FGS
Sbjct: 468 DAAFYGPKLDFVVKDVLGREWQLGTIQVDYNLPERFDLTYTGEDGQEHRPVMIHRAPFGS 527

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
           +ERF+GI+IE++ G+ P WL+P Q ++  I      YAQ +AN  K+  L  E D  N  
Sbjct: 528 LERFVGILIEHYGGDFPFWLAPRQIMLIPIADRHNAYAQTLANEFKAAGLRAEVDDSNNR 587

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           +N K+R   + KIP+++I GD+E + R + +R
Sbjct: 588 MNAKVRNAELHKIPVMLIVGDQEEARREVSVR 619


>gi|293372832|ref|ZP_06619210.1| threonine--tRNA ligase [Bacteroides ovatus SD CMC 3f]
 gi|298480838|ref|ZP_06999033.1| threonine--tRNA ligase [Bacteroides sp. D22]
 gi|292632207|gb|EFF50807.1| threonine--tRNA ligase [Bacteroides ovatus SD CMC 3f]
 gi|295085227|emb|CBK66750.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Bacteroides
           xylanisolvens XB1A]
 gi|298272861|gb|EFI14427.1| threonine--tRNA ligase [Bacteroides sp. D22]
          Length = 646

 Score =  504 bits (1299), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 261/648 (40%), Positives = 395/648 (60%), Gaps = 19/648 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIEIITP 64
           IK+TFPDGS++ +     G  +AESIS  LA++ +A  +NG+  DL  P+ E +  ++  
Sbjct: 2   IKITFPDGSVREYNEGVNGLQIAESISSRLAQEVLACGVNGETYDLGRPINEDANFVLYK 61

Query: 65  -EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
            +D        H+ AH++AEA+Q ++P +Q  IGP IE+GFYYD D  E      +L  I
Sbjct: 62  WDDEEGKHAFWHTSAHLLAEALQELYPGIQFGIGPAIENGFYYDVDPGEAVIKESDLPAI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E KM E+ A+    +++ ++   A ++F  + E YK E++  +    ++T Y QG + DL
Sbjct: 122 EAKMLELAAKKEEVVRKSIAKTDALKMFGDRGETYKCELISEL-EDGHITTYTQGAFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ +T  +K   KL  VAGAYWRG  +R ML+RIYG  +  ++ L +YL  LEE++
Sbjct: 181 CRGPHLMTTAPIKAI-KLTSVAGAYWRGHEDRKMLTRIYGITFPKKKMLDEYLVLLEEAK 239

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           KRDHRK+ +EM LF  +E  G G+  W  KG  +   L  ++RR + + DY+E+ TP + 
Sbjct: 240 KRDHRKIGKEMQLFMFSETVGKGLPMWLPKGTALRLRLQEFLRRIQTRYDYQEVITPPIG 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ L+  SGH+  Y  + F       T ++   + LKPMNCP H  ++ +  +SY++LP+
Sbjct: 300 NKLLYVTSGHYAKYGKDAFQ---PIHTPEEGEEYFLKPMNCPHHCEIYKNFPRSYKDLPL 356

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AEFG+V R E SG LHGL RVR FTQDDAH+FC  EQ+ +E L++ ++I  +++   F
Sbjct: 357 RIAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPEQVKDEFLRVMDIISIVFRSMDF 416

Query: 421 EKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           +    ++S R     EK +GSD  W+ AE  +      I+  ++  +   +  GE AFYG
Sbjct: 417 QNFEAQISLRDKVNREKYIGSDDNWEKAEQAI------IEACAEKGLPAKIEYGEAAFYG 470

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK ++++KDAIGR WQ GTIQVD+NLP RF   Y+ S ++K  PVMIHRA FGS+ERF+ 
Sbjct: 471 PKLDFMVKDAIGRRWQLGTIQVDYNLPERFELEYMGSDNQKHRPVMIHRAPFGSMERFVA 530

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           ++IE+  G  PLWL+P Q ++  I+    EYA+++   LK H +    D RNE I  KIR
Sbjct: 531 VLIEHTAGKFPLWLTPEQVVILPISEKFNEYAEQVKMYLKIHEIRAIVDDRNEKIGRKIR 590

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           ++ +K+IP ++I G+KEA    + +RR G      +   +   IL +E
Sbjct: 591 DNEMKRIPYMLIVGEKEAENGEVSVRRQGEGDKGTMKFEEFAKILNEE 638


>gi|237716078|ref|ZP_04546559.1| threonyl-tRNA synthetase [Bacteroides sp. D1]
 gi|262407690|ref|ZP_06084238.1| threonyl-tRNA synthetase [Bacteroides sp. 2_1_22]
 gi|294643798|ref|ZP_06721596.1| threonine--tRNA ligase [Bacteroides ovatus SD CC 2a]
 gi|294808458|ref|ZP_06767211.1| threonine--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
 gi|229443725|gb|EEO49516.1| threonyl-tRNA synthetase [Bacteroides sp. D1]
 gi|262354498|gb|EEZ03590.1| threonyl-tRNA synthetase [Bacteroides sp. 2_1_22]
 gi|292640887|gb|EFF59107.1| threonine--tRNA ligase [Bacteroides ovatus SD CC 2a]
 gi|294444386|gb|EFG13100.1| threonine--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
          Length = 646

 Score =  504 bits (1298), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 261/648 (40%), Positives = 395/648 (60%), Gaps = 19/648 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIEIITP 64
           IK+TFPDGS++ +     G  +AESIS  LA++ +A  +NG+  DL  P+ E +  ++  
Sbjct: 2   IKITFPDGSVREYNEGVNGLQIAESISSRLAQEVLACGVNGETYDLGRPINEDANFVLYK 61

Query: 65  -EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
            +D        H+ AH++AEA+Q ++P +Q  IGP IE+GFYYD D  E      +L  I
Sbjct: 62  WDDEEGKHAFWHTSAHLLAEALQELYPGIQFGIGPAIENGFYYDVDPGEAVIKESDLPAI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E KM E+ A+    +++ ++   A ++F  + E YK E++  +    ++T Y QG + DL
Sbjct: 122 EAKMLELAAKKEEVVRKSIAKTDALKMFGDRGETYKCELISEL-EDGHITTYTQGAFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ +T  +K   KL  VAGAYWRG  +R ML+RIYG  +  ++ L +YL  LEE++
Sbjct: 181 CRGPHLMTTAPIKAI-KLTSVAGAYWRGHEDRKMLTRIYGITFPKKKMLDEYLILLEEAK 239

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           KRDHRK+ +EM LF  +E  G G+  W  KG  +   L  ++RR + + DY+E+ TP + 
Sbjct: 240 KRDHRKIGKEMQLFMFSETVGKGLPMWLPKGTALRLRLQEFLRRIQTRYDYQEVITPPIG 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ L+  SGH+  Y  + F       T ++   + LKPMNCP H  ++ +  +SY++LP+
Sbjct: 300 NKLLYVTSGHYAKYGKDAFQ---PIHTPEEGEEYFLKPMNCPHHCEIYKNFPRSYKDLPL 356

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AEFG+V R E SG LHGL RVR FTQDDAH+FC  EQ+ +E L++ ++I  +++   F
Sbjct: 357 RIAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPEQVKDEFLRVMDIISIVFRSMDF 416

Query: 421 EKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           +    ++S R     EK +GSD  W+ AE  +      I+  ++  +   +  GE AFYG
Sbjct: 417 QNFEAQISLRDKVNREKYIGSDDNWEKAEQAI------IEACAEKGLPAKIEYGEAAFYG 470

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK ++++KDAIGR WQ GTIQVD+NLP RF   Y+ S ++K  PVMIHRA FGS+ERF+ 
Sbjct: 471 PKLDFMVKDAIGRRWQLGTIQVDYNLPERFELEYMGSDNQKHRPVMIHRAPFGSMERFVA 530

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           ++IE+  G  PLWL+P Q ++  I+    EYA+++   LK H +    D RNE I  KIR
Sbjct: 531 VLIEHTAGKFPLWLTPEQVVILPISEKFNEYAEQVKMYLKIHEIRAIVDDRNEKIGRKIR 590

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           ++ +K+IP ++I G+KEA    + +RR G      +   +   IL +E
Sbjct: 591 DNEMKRIPYMLIVGEKEAENGEVSVRRQGEGDKGTMKFEEFAKILNEE 638


>gi|160883804|ref|ZP_02064807.1| hypothetical protein BACOVA_01776 [Bacteroides ovatus ATCC 8483]
 gi|237722137|ref|ZP_04552618.1| threonyl-tRNA synthetase [Bacteroides sp. 2_2_4]
 gi|299149166|ref|ZP_07042227.1| threonine--tRNA ligase [Bacteroides sp. 3_1_23]
 gi|156110889|gb|EDO12634.1| hypothetical protein BACOVA_01776 [Bacteroides ovatus ATCC 8483]
 gi|229447947|gb|EEO53738.1| threonyl-tRNA synthetase [Bacteroides sp. 2_2_4]
 gi|298512833|gb|EFI36721.1| threonine--tRNA ligase [Bacteroides sp. 3_1_23]
          Length = 646

 Score =  504 bits (1298), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 261/648 (40%), Positives = 395/648 (60%), Gaps = 19/648 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIEIITP 64
           IK+TFPDGS++ +     G  +AESIS  LA++ +A  +NG+  DL  P+ E +  ++  
Sbjct: 2   IKITFPDGSVREYNEGVNGLQIAESISSRLAQEVLACGVNGETYDLGRPINEDANFVLYK 61

Query: 65  -EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
            +D        H+ AH++AEA+Q ++P +Q  IGP IE+GFYYD D  E      +L  I
Sbjct: 62  WDDEEGKHAFWHTSAHLLAEALQELYPGIQFGIGPAIENGFYYDVDPGEAVIKESDLPAI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E KM E+ A+    +++ ++   A ++F  + E YK E++  +    ++T Y QG + DL
Sbjct: 122 EAKMLELAAKKEDVVRKSIAKTDALKMFGDRGETYKCELISEL-EDGHITTYTQGAFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ +T  +K   KL  VAGAYWRG  +R ML+RIYG  +  ++ L +YL  LEE++
Sbjct: 181 CRGPHLMTTAPIKAI-KLTSVAGAYWRGHEDRKMLTRIYGITFPKKKMLDEYLVLLEEAK 239

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           KRDHRK+ +EM LF  +E  G G+  W  KG  +   L  ++RR + + DY+E+ TP + 
Sbjct: 240 KRDHRKIGKEMQLFMFSETVGKGLPMWLPKGTALRLRLQEFLRRIQTRYDYQEVITPPIG 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ L+  SGH+  Y  + F       T ++   + LKPMNCP H  ++ +  +SY++LP+
Sbjct: 300 NKLLYVTSGHYAKYGKDAFQ---PIHTPEEGEEYFLKPMNCPHHCEIYKNFPRSYKDLPL 356

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AEFG+V R E SG LHGL RVR FTQDDAH+FC  EQ+ +E L++ ++I  +++   F
Sbjct: 357 RIAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPEQVKDEFLRVMDIISIVFRSMDF 416

Query: 421 EKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           +    ++S R     EK +GSD  W+ AE  +      I+  ++  +   +  GE AFYG
Sbjct: 417 QNFEAQISLRDKVNREKYIGSDDNWEKAEQAI------IEACAEKGLPAKIEYGEAAFYG 470

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK ++++KDAIGR WQ GTIQVD+NLP RF   Y+ S ++K  PVMIHRA FGS+ERF+ 
Sbjct: 471 PKLDFMVKDAIGRRWQLGTIQVDYNLPERFELEYMGSDNQKHRPVMIHRAPFGSMERFVA 530

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           ++IE+  G  PLWL+P Q ++  I+    EYA+++   LK H +    D RNE I  KIR
Sbjct: 531 VLIEHTAGKFPLWLTPEQVVILPISEKFNEYAEQVKMYLKIHEIRAIVDDRNEKIGRKIR 590

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           ++ +K+IP ++I G+KEA    + +RR G      +   +   IL +E
Sbjct: 591 DNEMKRIPYMLIVGEKEAENGEVSVRRQGEGDKGTMKFEEFAKILNEE 638


>gi|160889627|ref|ZP_02070630.1| hypothetical protein BACUNI_02053 [Bacteroides uniformis ATCC 8492]
 gi|317479178|ref|ZP_07938315.1| threonyl-tRNA synthetase [Bacteroides sp. 4_1_36]
 gi|156860619|gb|EDO54050.1| hypothetical protein BACUNI_02053 [Bacteroides uniformis ATCC 8492]
 gi|316904666|gb|EFV26483.1| threonyl-tRNA synthetase [Bacteroides sp. 4_1_36]
          Length = 646

 Score =  504 bits (1298), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 254/629 (40%), Positives = 389/629 (61%), Gaps = 19/629 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           IK+TFPDGS++ +    TG  +AESIS  LA+  +A  +NG++ DL  P+ ++  + +  
Sbjct: 2   IKITFPDGSVREYNEGVTGLQIAESISSRLAQDVLACGVNGEIYDLGRPIMQDAEVVLYK 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
            ED +      H+ AH++AEA+Q ++P +   IGP IE+GFYYD D  E      +L  I
Sbjct: 62  WEDEQGKHAFWHTSAHLLAEALQELYPGILFGIGPAIENGFYYDVDPGETTIKEADLPAI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EKKM E++A+    ++Q ++   A ++F  + E YK E++  +    ++T Y QG + DL
Sbjct: 122 EKKMAELVAKKEAVVRQDIAKADALKMFGDRGETYKCELISEL-EDGHITTYTQGAFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ +T  +K   KL  VAGAYWRG  +R M++RIYG  +  ++ L +YL  LEE++
Sbjct: 181 CRGPHLMTTAPIKAI-KLTSVAGAYWRGQEDRKMMTRIYGITFPKKKMLDEYLVLLEEAK 239

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           KRDHRK+ +EMDLF  ++  G G+  W  KG  +   L  ++RR + + DY+E+  P + 
Sbjct: 240 KRDHRKIGKEMDLFMFSDTVGKGLPMWLPKGTALRIRLQDFLRRIQARYDYQEVMCPPIG 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ L+  SGH+  Y  + F       T ++   + LKPMNCP H  ++ +  +SY++LP+
Sbjct: 300 NKLLYITSGHYAKYGKDSFQ---PIHTPEEGEEYFLKPMNCPHHCMIYKNSPRSYKDLPL 356

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLAEFG+V R E SG LHGL RVR FTQDDAH+FC  +Q+ +E L++ ++I  +++   F
Sbjct: 357 RLAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKDEFLRVMDIISIVFESMDF 416

Query: 421 EKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           E    ++S R     EK +GSD  W+ AE  +      I+   +  +   +  GE AFYG
Sbjct: 417 ENFEAQISLRDKVNREKYIGSDENWEKAERAI------IEACEEKGLKAKIEYGEAAFYG 470

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK ++++KDAIGR WQ GTIQVD+NLP RF   Y  + ++K  PVM+HRA FGS+ERF+ 
Sbjct: 471 PKLDFMVKDAIGRRWQLGTIQVDYNLPERFQLEYTGADNQKHRPVMVHRAPFGSMERFVA 530

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           ++IE+  G  PLWL+P Q  +  I+    +YA E+   LK + +    D RNE I  KIR
Sbjct: 531 VLIEHTAGKFPLWLTPDQVAILPISEKFNDYAHEVKQYLKRYDIRAIVDERNEKIGRKIR 590

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFG 625
           ++ +K+IP +++ G+KEA  + + +R+ G
Sbjct: 591 DNEMKRIPYMLVVGEKEAENKEVAVRKQG 619


>gi|325298803|ref|YP_004258720.1| threonyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
 gi|324318356|gb|ADY36247.1| threonyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
          Length = 647

 Score =  504 bits (1298), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 260/639 (40%), Positives = 391/639 (61%), Gaps = 20/639 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+TFPDGS++ +    TG  +AESIS  LA+  +A  +NG+  DL+ P+ E  S+ +  
Sbjct: 2   IKITFPDGSVREYNEGVTGLQIAESISSRLAQDVLACGVNGETIDLTRPINEDASVVLYK 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQP--FSSDELAQ 121
            +D +      H+ AH++AEA+Q ++P +Q  IGP IE+GFYYD D          +L  
Sbjct: 62  WDDEQGKHAFWHTSAHLLAEALQELYPGIQFGIGPAIENGFYYDVDPGDGVVIKESDLPA 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE+KM E+ AR  P ++  ++ + A ++F  + E YK E++  +    ++T Y QG + D
Sbjct: 122 IEQKMIELAARKEPLVRANIAKDDALKMFGERGETYKCELISEL-EDGHITTYTQGAFTD 180

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ ST  +K   KL+ VAGAYWRG  +R  ++RIYG  +  ++ L +YL  LEE+
Sbjct: 181 LCRGPHLPSTAPIKAI-KLLSVAGAYWRGQEDRKQMTRIYGITFPKKKMLDEYLVMLEEA 239

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           +KRDHRK+ +EMDLF  ++  G G+  W  KG  +   L  ++RR + + DY+E+  P +
Sbjct: 240 KKRDHRKIGKEMDLFMFSDMVGKGLPMWLPKGTALRIRLQDFLRRIQARYDYQEVMCPPI 299

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            ++ L+  SGH+  Y  + F       T ++   + LKPMNCP H  ++ +  +SYR+LP
Sbjct: 300 GNKLLYVTSGHYAKYGKDSFQ---PIHTPEEGEEYFLKPMNCPHHCMIYRNSPRSYRDLP 356

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AEFG+V R E SG LHGL RVR FTQDDAH+FC  +Q+ +E L++ ++I  ++K   
Sbjct: 357 LRIAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKDEFLRVMDIISIVFKSMN 416

Query: 420 FEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           FE    ++S R     EK +GSD  W+ AE  +      ++   +  +   V  GE AFY
Sbjct: 417 FENFEAQISLRDKVNREKYIGSDENWEKAEQAI------VEACQEKGLKAKVEYGEAAFY 470

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDAIGR WQ GTIQVD+NLP RF   Y+ + ++K  PVMIHRA FGS+ERF+
Sbjct: 471 GPKLDFMVKDAIGRRWQLGTIQVDYNLPERFQLEYMGADNQKHRPVMIHRAPFGSMERFV 530

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE+  G  PLWL+P Q  V  I+    EYA ++   LK + +    D RNE I  KI
Sbjct: 531 AVLIEHTAGKFPLWLTPDQVAVLPISEKFNEYADQVRLELKKYDIRALVDDRNEKIGRKI 590

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           R++ +K IP ++I G+KEA+   + +R+ G      V +
Sbjct: 591 RDNEMKHIPYMLIVGEKEAANGEVSVRKQGEGDKGTVKI 629


>gi|260170790|ref|ZP_05757202.1| threonyl-tRNA synthetase [Bacteroides sp. D2]
 gi|315919124|ref|ZP_07915364.1| threonyl-tRNA synthetase [Bacteroides sp. D2]
 gi|313692999|gb|EFS29834.1| threonyl-tRNA synthetase [Bacteroides sp. D2]
          Length = 646

 Score =  504 bits (1298), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 261/648 (40%), Positives = 395/648 (60%), Gaps = 19/648 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIEIITP 64
           IK+TFPDGS++ +     G  +AESIS  LA++ +A  +NG+  DL  P+ E +  ++  
Sbjct: 2   IKITFPDGSVREYNEGVNGLQIAESISSRLAQEVLACGVNGETYDLGRPINEDANFVLYK 61

Query: 65  -EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
            +D        H+ AH++AEA+Q ++P +Q  IGP IE+GFYYD D  E      +L  I
Sbjct: 62  WDDEEGKHAFWHTSAHLLAEALQELYPGIQFGIGPAIENGFYYDVDPGEAVIKESDLPAI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E KM E+ A+    +++ ++   A ++F  + E YK E++  +    ++T Y QG + DL
Sbjct: 122 EAKMLELAAKKEDVVRKSIAKTDALKMFGDRGETYKCELISEL-EDGHITTYTQGAFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ +T  +K   KL  VAGAYWRG  +R ML+RIYG  +  ++ L +YL  LEE++
Sbjct: 181 CRGPHLMTTAPIKAI-KLTTVAGAYWRGHEDRKMLTRIYGITFPKKKMLDEYLVLLEEAK 239

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           KRDHRK+ +EM LF  +E  G G+  W  KG  +   L  ++RR + + DY+E+ TP + 
Sbjct: 240 KRDHRKIGKEMQLFMFSETVGKGLPMWLPKGTALRLRLQEFLRRIQTRYDYQEVITPPIG 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ L+  SGH+  Y  + F       T ++   + LKPMNCP H  ++ +  +SY++LP+
Sbjct: 300 NKLLYVTSGHYAKYGKDAFQ---PIHTPEEGEEYFLKPMNCPHHCEIYKNFPRSYKDLPL 356

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AEFG+V R E SG LHGL RVR FTQDDAH+FC  EQ+ +E L++ ++I  +++   F
Sbjct: 357 RIAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPEQVKDEFLRVMDIISIVFRSMDF 416

Query: 421 EKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           +    ++S R     EK +GSD  W+ AE  +      I+  ++  +   +  GE AFYG
Sbjct: 417 QNFEAQISLRDKVNREKYIGSDDNWEKAEQAI------IEACAEKGLPAKIEYGEAAFYG 470

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK ++++KDAIGR WQ GTIQVD+NLP RF   Y+ S ++K  PVMIHRA FGS+ERF+ 
Sbjct: 471 PKLDFMVKDAIGRRWQLGTIQVDYNLPERFELEYMGSDNQKHRPVMIHRAPFGSMERFVA 530

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           ++IE+  G  PLWL+P Q ++  I+    EYA+++   LK H +    D RNE I  KIR
Sbjct: 531 VLIEHTAGKFPLWLTPEQVVILPISEKFNEYAEQVKMYLKIHEIRAIVDDRNEKIGRKIR 590

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           ++ +K+IP ++I G+KEA    + +RR G      +   +   IL +E
Sbjct: 591 DNEMKRIPYMLIVGEKEAENGEVSVRRQGEGDKGTMKFEEFAKILNEE 638


>gi|255692010|ref|ZP_05415685.1| threonine--tRNA ligase [Bacteroides finegoldii DSM 17565]
 gi|260622256|gb|EEX45127.1| threonine--tRNA ligase [Bacteroides finegoldii DSM 17565]
          Length = 646

 Score =  504 bits (1298), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 260/648 (40%), Positives = 393/648 (60%), Gaps = 19/648 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIEIITP 64
           IK+ FPDGS++ +     G  +AESIS  LA+  +A  +NG+  DL  P+ E +  ++  
Sbjct: 2   IKIKFPDGSVREYNEGVNGLQIAESISSRLAQDVLACGVNGETYDLGRPINEDADFVLYK 61

Query: 65  -EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
            +D        H+ AH++AEA+Q ++P +Q  IGP IE+GFYYD D  E      +L  I
Sbjct: 62  WDDEEGKHAFWHTSAHLLAEALQELYPGIQFGIGPAIENGFYYDVDPGEAVIKESDLPAI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E KMQE+ A+    +++ ++   A ++F  + E YK E++  +    ++T Y QG + DL
Sbjct: 122 EAKMQELAAKKEDVVRESIAKADALKMFGDRGETYKCELISEL-EDGHITTYTQGAFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ +T  +K   KL  VAGAYWRG  +R ML+RIYG  +  ++ L +YL  LEE++
Sbjct: 181 CRGPHLMTTAPIKAI-KLTTVAGAYWRGQEDRKMLTRIYGITFPKKKMLDEYLVLLEEAK 239

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           KRDHRK+ +EM LF  +E  G G+  W  KG  +   L  ++RR + + DY+E+ TP + 
Sbjct: 240 KRDHRKIGKEMQLFMFSETVGKGLPMWLPKGTALRLRLQEFLRRIQTRYDYQEVITPPIG 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ L+  SGH+  Y  + F       T ++   + LKPMNCP H  ++ +  +SY++LP+
Sbjct: 300 NKLLYVTSGHYAKYGKDAFQ---PIHTPEEGEEYFLKPMNCPHHCEIYKNFPRSYKDLPL 356

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AEFG+V R E SG LHGL RVR FTQDDAH+FC  +Q+ +E L++ ++I  +++   F
Sbjct: 357 RIAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKDEFLRVMDIISIVFRSMNF 416

Query: 421 EKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           +    ++S R     EK +GSD  W+ AE  +      I+   +  +   +  GE AFYG
Sbjct: 417 QNFEAQISLRDKVNREKYIGSDDNWEKAEQAI------IEACEEKGLPAKIEYGEAAFYG 470

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK ++++KDAIGR WQ GTIQVD+NLP RF   Y+ S ++K  PVMIHRA FGS+ERF+ 
Sbjct: 471 PKLDFMVKDAIGRRWQLGTIQVDYNLPERFELEYMGSDNQKHRPVMIHRAPFGSMERFVA 530

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           ++IE+  G  PLWL+P Q  +  I+    EYA+++   LK+H +    D RNE I  KIR
Sbjct: 531 VLIEHTAGKFPLWLTPDQVAILPISEKFNEYAEQVKMYLKTHEIRAIVDDRNEKIGRKIR 590

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           ++ +K+IP ++I G+KEA    + +RR G      +   +   IL +E
Sbjct: 591 DNEMKRIPYMLIVGEKEAENGEVSVRRQGEGDKGTMKFEEFAKILNEE 638


>gi|87303299|ref|ZP_01086092.1| Threonyl-tRNA synthetase, class IIa [Synechococcus sp. WH 5701]
 gi|87282194|gb|EAQ74155.1| Threonyl-tRNA synthetase, class IIa [Synechococcus sp. WH 5701]
          Length = 603

 Score =  504 bits (1298), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 257/564 (45%), Positives = 354/564 (62%), Gaps = 18/564 (3%)

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T E P  L  IRHS +H++A AVQ ++P  QV IGP  E+GFYYDFD  +PF+  +L  I
Sbjct: 15  TSESP-ELLRIRHSMSHVLAMAVQKLFPSSQVTIGPWTENGFYYDFDNPEPFTEADLKAI 73

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG-EWFD 181
           +K+M +IIAR  P  +  +S E+A    +++ E YK+EIL  I  +E +TLY  G EW+D
Sbjct: 74  KKEMGKIIARKLPLQRLEVSREQAEARIKAQNEPYKLEILAGI--QEPITLYTLGDEWWD 131

Query: 182 LCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           LC GPHV +T ++  K F+L  VAGAYWRGD  R  L RIYGTAW T ++L +Y +  +E
Sbjct: 132 LCAGPHVANTSELNPKAFELESVAGAYWRGDETRAQLQRIYGTAWQTPEQLAEYKHRKQE 191

Query: 241 SEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQ 298
           + +RDHR+L  ++ LF I  E G+G++FWH +G ++   +  + R+      Y+ + TP 
Sbjct: 192 ALRRDHRRLGTDLQLFSIEDEAGAGLVFWHPRGARMRLLIEDFWRQAHFAAGYDLLYTPH 251

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V D  LW+ SGH D Y  +MF     D+     R + LKPMNCP HV  +   L+SYREL
Sbjct: 252 VADLSLWKTSGHLDFYSESMFGPMQVDE-----RQYQLKPMNCPFHVLTYASTLRSYREL 306

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R AE G+VYR E  G +HGLMRVRGFTQDDAH+FC  EQ+ +E L + NL  +I   F
Sbjct: 307 PIRWAELGTVYRYERPGVMHGLMRVRGFTQDDAHIFCLPEQIGDEILGVLNLTETILSSF 366

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
            F    V LSTRPEK +G DA+WD A   +   LD  +     +I+ G     GAFYGPK
Sbjct: 367 DFHTYEVNLSTRPEKSIGDDAVWDLATTGLIEALD--RKGWPYKIDEG----GGAFYGPK 420

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +  ++DAIGR WQC TIQ+DFNLP RF+  YV +   +  P+MIHRA+FGS+ERF GIM
Sbjct: 421 IDIKIEDAIGRMWQCSTIQLDFNLPERFDLHYVAADGSRQRPIMIHRAIFGSLERFFGIM 480

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           +EN+ G+ P WL+P Q  +  +T   + YA+E+   L+S  +    D   + +   IR  
Sbjct: 481 VENYAGDFPFWLAPEQVRLLPVTDEVIPYAEEVLGQLRSAGVRAAIDRSGDRLGKLIRHG 540

Query: 599 SIKKIPIIIICGDKEASERSIGIR 622
             +KIP++ + G KEA + S+ +R
Sbjct: 541 EQQKIPVLAVIGAKEAEQGSVSLR 564


>gi|254383626|ref|ZP_04998976.1| threonyl-tRNA synthetase [Streptomyces sp. Mg1]
 gi|194342521|gb|EDX23487.1| threonyl-tRNA synthetase [Streptomyces sp. Mg1]
          Length = 658

 Score =  503 bits (1296), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 277/668 (41%), Positives = 396/668 (59%), Gaps = 46/668 (6%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           SD+++     S ++  V ATG+  AE  +    +  VA  I G++ DL+  VR+G ++E 
Sbjct: 2   SDVRVIIQRDSERDERVVATGTTAAELFAGE--RTIVAARIAGELKDLAYEVRDGETVEP 59

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +       L ++RHS AH+MA+AVQ ++PE ++ IGP +++GFYYDFD E+PF+ D+L  
Sbjct: 60  VEISSEDGLNILRHSTAHVMAQAVQELFPEAKLGIGPPVQNGFYYDFDVEKPFTPDDLKA 119

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-----ESIPAKENV----- 171
           IEKKMQEI  R   F ++ ++ E ARE  E   E YK+E++      S     NV     
Sbjct: 120 IEKKMQEIQKRGQRFARRVVTDEAARE--ELAGEPYKLELIGIKGSASTDDGANVEVGGG 177

Query: 172 --TLY-----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYG 222
             T+Y     + GE  W DLCRGPH+ +T  +  F KLM+ A AYWRG    PML RIYG
Sbjct: 178 ELTIYDNLDAKTGELCWKDLCRGPHLPTTRNIPAF-KLMRNAAAYWRGSEKNPMLQRIYG 236

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLIS 281
           TAW ++ EL  +L FL E+EKRDHRKL  E+DLF + ++ GSG+  +H +G  I +T+  
Sbjct: 237 TAWPSKDELKAHLDFLAEAEKRDHRKLGNELDLFSVPDEIGSGLAVFHPRGGIIRRTMED 296

Query: 282 YMRRKIKDD-YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
           Y RR+ +++ YE + TP      L+++SGH D Y   M+     D        + LKPMN
Sbjct: 297 YSRRRHEEEGYEFVYTPHATKGALFEKSGHLDWYAEGMYPPMQLDGGTD----YYLKPMN 352

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
           CP H  +F+   +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDDAH++CT+EQM
Sbjct: 353 CPMHNLIFDARGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYCTREQM 412

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTR-PEKRVGSDALWDDAENIMKGVLDTIKNSS 459
             E  +    ++++ +D+G     ++LST+ PEK VGSD  W++A  ++  V +      
Sbjct: 413 AEELDRTLTFVLNLLRDYGLTDFYLELSTKDPEKFVGSDEAWEEATAVLAQVAE------ 466

Query: 460 QDRINTGVLL----GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS 515
                 G+ L    G  AFYGPK     KDAIGR WQ  T+Q+DFNLP RFN  Y     
Sbjct: 467 ----KQGLPLVPDPGGAAFYGPKISVQCKDAIGRTWQMSTVQLDFNLPERFNLEYTAPDG 522

Query: 516 EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLL 575
            +  PVMIHRA+FGSIERF  +++E++ G +P WL+P+QA+   I    VEY QE A   
Sbjct: 523 SRQRPVMIHRALFGSIERFFAVLLEHYAGAMPPWLAPVQAVGIPIGDGHVEYLQEFAAEA 582

Query: 576 KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
           K   L +E D  ++ +  KIR H   K+P +II GD++ +  ++  R    +    ++  
Sbjct: 583 KKQGLRVEVDASSDRMQKKIRNHQKLKVPFMIIVGDEDMAAGTVSFRYRDGSQENGIAKD 642

Query: 636 DAIPILTK 643
           +A+  L K
Sbjct: 643 EALAKLAK 650


>gi|254881560|ref|ZP_05254270.1| threonyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
 gi|294778842|ref|ZP_06744259.1| threonine--tRNA ligase [Bacteroides vulgatus PC510]
 gi|254834353|gb|EET14662.1| threonyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
 gi|294447295|gb|EFG15878.1| threonine--tRNA ligase [Bacteroides vulgatus PC510]
          Length = 646

 Score =  503 bits (1296), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 260/629 (41%), Positives = 388/629 (61%), Gaps = 19/629 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIEIITP 64
           IK+TFPDGS++ +    TG  +AESIS  LA+  +A  +NG+  DLS P+ E +  ++  
Sbjct: 2   IKITFPDGSVREYNEGVTGLQIAESISSRLAQDVLACGVNGETIDLSRPINEDANFVLYK 61

Query: 65  -EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
            ED +      H+ AH++AEA+Q ++P +Q  IGP IE+GFYYD D  E      +L  I
Sbjct: 62  WEDEQGKHAFWHTSAHLLAEALQELYPGIQFGIGPAIENGFYYDVDPGEAIIKEADLPAI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E KM E+ A+    ++Q ++ E A + F  + E YK E++  +    ++T Y QG + DL
Sbjct: 122 EAKMAELAAKKEILVRQSIAKEDALKKFGERGETYKCELISEL-EDGHITTYTQGAFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ ST  +K   KL+ VAGAYWRG  +R  ++RIYG  +  ++ L +YL  LEE++
Sbjct: 181 CRGPHLTSTAPIKAI-KLLSVAGAYWRGQEDRKQMTRIYGITFPKKKMLDEYLVMLEEAK 239

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           KRDHRK+ +EMDLF   +  G G+  W  KG  +   L  ++RR + + DY+E+  P + 
Sbjct: 240 KRDHRKIGKEMDLFMFTDMVGKGLPMWLPKGTALRIRLQDFLRRIQARYDYQEVMCPPIG 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +++L+  SGH+  Y  + F       T ++   + LKPMNCP H  ++ +  +SY++LP+
Sbjct: 300 NKNLYITSGHYAKYGKDSFQ---PIHTPEEGEEYFLKPMNCPHHCMIYKNSPRSYKDLPL 356

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AEFG+V R E SG LHGL RVR FTQDDAH+FC  +Q+  E L++ ++I  ++K   F
Sbjct: 357 RIAEFGTVCRYEQSGELHGLTRVRSFTQDDAHLFCRPDQVKEEFLRVMDIINIVFKSMNF 416

Query: 421 EKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           E +  ++S R     EK +GSD  W+ AE  +      I+   +  +   V  GE AFYG
Sbjct: 417 ENVEAQISLRDKVNREKYIGSDENWEKAEQAI------IEACEEKGLTAKVEYGEAAFYG 470

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK ++++KDAIGR WQ GTIQVD+NLP RF   Y+ S ++K  PVMIHRA FGS+ERF+ 
Sbjct: 471 PKLDFMVKDAIGRRWQLGTIQVDYNLPERFQLEYMGSDNQKHRPVMIHRAPFGSMERFVA 530

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           ++IE+  G  PLWL+P Q  +  I+    EYA+++   L+   +    D RNE I  KIR
Sbjct: 531 VLIEHTAGKFPLWLTPDQVAILPISEKFNEYAEQVKAELRKFDVRAIVDDRNEKIGRKIR 590

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFG 625
           ++ +K+IP ++I G+KEA    + +R+ G
Sbjct: 591 DNEMKRIPYMLIVGEKEAENGEVAVRKQG 619


>gi|150006539|ref|YP_001301283.1| threonyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482]
 gi|319642944|ref|ZP_07997580.1| threonyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
 gi|166223322|sp|A6L7J7|SYT_BACV8 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|149934963|gb|ABR41661.1| threonyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482]
 gi|317385492|gb|EFV66435.1| threonyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
          Length = 646

 Score =  503 bits (1296), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 260/629 (41%), Positives = 388/629 (61%), Gaps = 19/629 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIEIITP 64
           IK+TFPDGS++ +    TG  +AESIS  LA+  +A  +NG+  DLS P+ E +  ++  
Sbjct: 2   IKITFPDGSVREYNEGVTGLQIAESISSRLAQDVLACGVNGETIDLSRPINEDANFVLYK 61

Query: 65  -EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
            ED +      H+ AH++AEA+Q ++P +Q  IGP IE+GFYYD D  E      +L  I
Sbjct: 62  WEDEQGKHAFWHTSAHLLAEALQELYPGIQFGIGPAIENGFYYDVDPGEAIIKEADLPAI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E KM E+ A+    ++Q ++ E A + F  + E YK E++  +    ++T Y QG + DL
Sbjct: 122 EAKMAELAAKKEILVRQSIAKEDALKKFGERGETYKCELISEL-EDGHITTYTQGAFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ ST  +K   KL+ VAGAYWRG  +R  ++RIYG  +  ++ L +YL  LEE++
Sbjct: 181 CRGPHLTSTAPIKAI-KLLTVAGAYWRGQEDRKQMTRIYGITFPKKKMLDEYLVMLEEAK 239

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           KRDHRK+ +EMDLF   +  G G+  W  KG  +   L  ++RR + + DY+E+  P + 
Sbjct: 240 KRDHRKIGKEMDLFMFTDMVGKGLPMWLPKGTALRIRLQDFLRRIQARYDYQEVMCPPIG 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +++L+  SGH+  Y  + F       T ++   + LKPMNCP H  ++ +  +SY++LP+
Sbjct: 300 NKNLYITSGHYAKYGKDSFQ---PIHTPEEGEEYFLKPMNCPHHCMIYKNSPRSYKDLPL 356

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AEFG+V R E SG LHGL RVR FTQDDAH+FC  +Q+  E L++ ++I  ++K   F
Sbjct: 357 RIAEFGTVCRYEQSGELHGLTRVRSFTQDDAHLFCRPDQVKEEFLRVMDIINIVFKSMNF 416

Query: 421 EKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           E +  ++S R     EK +GSD  W+ AE  +      I+   +  +   V  GE AFYG
Sbjct: 417 ENVEAQISLRDKVNREKYIGSDENWEKAEQAI------IEACEEKGLTAKVEYGEAAFYG 470

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK ++++KDAIGR WQ GTIQVD+NLP RF   Y+ S ++K  PVMIHRA FGS+ERF+ 
Sbjct: 471 PKLDFMVKDAIGRRWQLGTIQVDYNLPERFQLEYMGSDNQKHRPVMIHRAPFGSMERFVA 530

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           ++IE+  G  PLWL+P Q  +  I+    EYA+++   L+   +    D RNE I  KIR
Sbjct: 531 VLIEHTAGKFPLWLTPDQVAILPISEKFNEYAEQVKAELRKFDVRAIVDDRNEKIGRKIR 590

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFG 625
           ++ +K+IP ++I G+KEA    + +R+ G
Sbjct: 591 DNEMKRIPYMLIVGEKEAENGEVAVRKQG 619


>gi|212691282|ref|ZP_03299410.1| hypothetical protein BACDOR_00773 [Bacteroides dorei DSM 17855]
 gi|237712289|ref|ZP_04542770.1| threonyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA]
 gi|237726428|ref|ZP_04556909.1| threonyl-tRNA synthetase [Bacteroides sp. D4]
 gi|212666514|gb|EEB27086.1| hypothetical protein BACDOR_00773 [Bacteroides dorei DSM 17855]
 gi|229434954|gb|EEO45031.1| threonyl-tRNA synthetase [Bacteroides dorei 5_1_36/D4]
 gi|229453610|gb|EEO59331.1| threonyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA]
          Length = 646

 Score =  503 bits (1296), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 260/629 (41%), Positives = 388/629 (61%), Gaps = 19/629 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIEIITP 64
           IK+TFPDGS++ +    TG  +AESIS  LA+  +A  +NG+  DLS P+ E +  ++  
Sbjct: 2   IKITFPDGSVREYNEGVTGLQIAESISSRLAQDVLACGVNGETIDLSRPINEDANFVLYK 61

Query: 65  -EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
            ED +      H+ AH++AEA+Q ++P +Q  IGP IE+GFYYD D  E      +L  I
Sbjct: 62  WEDEQGKHAFWHTSAHLLAEALQELYPGIQFGIGPAIENGFYYDVDPGEAIIKEADLPAI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E KM E+ A+    ++Q ++ E A + F  + E YK E++  +    ++T Y QG + DL
Sbjct: 122 EAKMAELAAKKEILVRQSIAKEDALKKFGERGETYKCELISEL-EDGHITTYTQGAFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ ST  +K   KL+ VAGAYWRG  +R  ++RIYG  +  ++ L +YL  LEE++
Sbjct: 181 CRGPHLTSTAPIKAI-KLLSVAGAYWRGQEDRKQMTRIYGITFPKKKMLDEYLVMLEEAK 239

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           KRDHRK+ +EMDLF   +  G G+  W  KG  +   L  ++RR + + DY+E+  P + 
Sbjct: 240 KRDHRKIGKEMDLFMFTDMVGKGLPMWLPKGTALRIRLQDFLRRIQARYDYQEVMCPPIG 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +++L+  SGH+  Y  + F       T ++   + LKPMNCP H  ++ +  +SY++LP+
Sbjct: 300 NKNLYITSGHYAKYGKDSFQ---PIHTPEEGEEYFLKPMNCPHHCMIYKNSPRSYKDLPL 356

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AEFG+V R E SG LHGL RVR FTQDDAH+FC  +Q+  E L++ ++I  ++K   F
Sbjct: 357 RIAEFGTVCRYEQSGELHGLTRVRSFTQDDAHLFCRPDQVKEEFLRVMDIINIVFKSMNF 416

Query: 421 EKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           E +  ++S R     EK +GSD  W+ AE  +      I+   +  +   V  GE AFYG
Sbjct: 417 ENVEAQISLRDKVNREKYIGSDENWEKAEQAI------IEACEEKGLTAKVEYGEAAFYG 470

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK ++++KDAIGR WQ GTIQVD+NLP RF   Y+ S ++K  PVMIHRA FGS+ERF+ 
Sbjct: 471 PKLDFMVKDAIGRRWQLGTIQVDYNLPERFQLEYMGSDNQKHRPVMIHRAPFGSMERFVA 530

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           ++IE+  G  PLWL+P Q  +  I+    EYA+++   L+   +    D RNE I  KIR
Sbjct: 531 VLIEHTAGKFPLWLTPDQVAILPISEKFNEYAEKVKAELRKFDVRAIVDDRNEKIGRKIR 590

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFG 625
           ++ +K+IP ++I G+KEA    + +R+ G
Sbjct: 591 DNEMKRIPYMLIVGEKEAENGEVAVRKQG 619


>gi|53712976|ref|YP_098968.1| threonyl-tRNA synthetase [Bacteroides fragilis YCH46]
 gi|60681188|ref|YP_211332.1| threonyl-tRNA synthetase [Bacteroides fragilis NCTC 9343]
 gi|253563046|ref|ZP_04840503.1| threonyl-tRNA synthetase [Bacteroides sp. 3_2_5]
 gi|265763073|ref|ZP_06091641.1| threonyl-tRNA synthetase [Bacteroides sp. 2_1_16]
 gi|73919767|sp|Q5LEQ6|SYT_BACFN RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|73919768|sp|Q64VP2|SYT_BACFR RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|52215841|dbj|BAD48434.1| threonyl-tRNA synthetase [Bacteroides fragilis YCH46]
 gi|60492622|emb|CAH07394.1| putative threonyl-tRNA synthetase [Bacteroides fragilis NCTC 9343]
 gi|251946822|gb|EES87104.1| threonyl-tRNA synthetase [Bacteroides sp. 3_2_5]
 gi|263255681|gb|EEZ27027.1| threonyl-tRNA synthetase [Bacteroides sp. 2_1_16]
 gi|301162677|emb|CBW22224.1| putative threonyl-tRNA synthetase [Bacteroides fragilis 638R]
          Length = 646

 Score =  503 bits (1296), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 259/648 (39%), Positives = 395/648 (60%), Gaps = 19/648 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+TFPDGS++ +     G  +AESIS  LA+  +A  +NG++ DL  P+ E  S+ +  
Sbjct: 2   IKITFPDGSVREYNEGVNGLQIAESISSRLAQDVLACGVNGEIYDLGRPINEDASVVLYK 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
            ED +      H+ AH++AEA+Q ++P +Q  IGP IE+GFYYD D  E      +L  I
Sbjct: 62  WEDEQGKHAFWHTSAHLLAEALQELYPGIQFGIGPAIENGFYYDVDPGEAVIKEADLPAI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E KM E++A+    +++ ++   A ++F  + E YK E++  +    ++T Y QG++ DL
Sbjct: 122 EAKMAELVAKKEAVVRRDIAKGDALKMFGDRGETYKCELISEL-EDGHITTYTQGDFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ +T  +K   KL  VAGAYWRG  +R ML+RIYG  +  ++ L +YL  +EE++
Sbjct: 181 CRGPHLMTTAPIKAI-KLTSVAGAYWRGHEDRKMLTRIYGITFPKKKMLDEYLALMEEAK 239

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           KRDHRK+ +EM LF  ++  G G+  W  KG  +   L  ++RR + + DY+E+ TP + 
Sbjct: 240 KRDHRKIGKEMQLFMFSDTVGKGLPMWLPKGTALRLRLQDFLRRIQTRYDYQEVITPPIG 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ L+  SGH+  Y  + F       T ++   + LKPMNCP H  ++ +  +SY++LP+
Sbjct: 300 NKLLYVTSGHYAKYGKDAFQ---PIHTPEEGEEYFLKPMNCPHHCEIYKNFPRSYKDLPL 356

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AEFG+V R E SG LHGL RVR FTQDDAH+FC  +Q+  E L++ ++I  +++   F
Sbjct: 357 RIAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKGEFLRVMDIISIVFRSMDF 416

Query: 421 EKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           +    ++S R     EK +GSD  W+ AE  +      I+   +  +   +  GE AFYG
Sbjct: 417 DNFEAQISLRDKVNREKYIGSDENWEKAEQAI------IEACEEKGLKAKIEYGEAAFYG 470

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK ++++KDAIGR WQ GTIQVD+NLP RF   Y+ S ++K  PVMIHRA FGS+ERF+ 
Sbjct: 471 PKLDFMVKDAIGRRWQLGTIQVDYNLPERFELEYMGSDNQKHRPVMIHRAPFGSMERFVA 530

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           ++IE+  G  PLWL+P Q ++  I+    EYA+++   LK   +    D RNE I  KIR
Sbjct: 531 VLIEHTAGKFPLWLTPEQVVILPISEKFNEYAEKVKTYLKMKEIRAIVDDRNEKIGRKIR 590

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           ++ +K+IP ++I G+KEA    + +RR G      +   +   IL +E
Sbjct: 591 DNEMKRIPYMLIVGEKEAENGEVSVRRQGEGDKGTMKFEEFGEILNEE 638


>gi|260911583|ref|ZP_05918168.1| threonine-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295]
 gi|260634289|gb|EEX52394.1| threonine-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295]
          Length = 654

 Score =  503 bits (1296), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 259/640 (40%), Positives = 398/640 (62%), Gaps = 21/640 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+TFPDGSI+ +    TG ++A+SIS +LA+  +++ +NGK  +L+ P+ E  +I +  
Sbjct: 2   IKITFPDGSIREYEKGITGLEIAKSISPALARDVLSIGVNGKTTELNRPINEDATIALYK 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ--PFSSDELAQ 121
            ED        HS AH++AEA+Q+++P +Q   GP +E+GF+YD   +   P S ++  +
Sbjct: 62  WEDEEGKHTFWHSSAHLLAEALQALYPGIQFGFGPAVENGFFYDVMTKDGTPISENDFPK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE+KM+E   RD   +++ +S   A + F++  + YK E ++       ++ Y QG + D
Sbjct: 122 IEEKMREFAKRDEAIVRREVSKADALKEFKADGQEYKCEHIDLDLEDGTISTYSQGAFTD 181

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ +TG +K   KL  VAGA+WRGD+ +  L+RIYG  +  ++ L +YL  LEE+
Sbjct: 182 LCRGPHLMTTGPIKAI-KLTSVAGAFWRGDAEKDQLTRIYGITFPKKKMLDEYLVMLEEA 240

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEINTPQ 298
           +KRDHRK+ +EM+LF  +E  G G+  W  KG ++ +  +  M RKI+    Y+E+ TP 
Sbjct: 241 KKRDHRKIGKEMELFMFSERVGKGLPIWLPKGTEL-RLRLQDMLRKIQKRFGYQEVITPH 299

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +  ++L+  SGH+  Y  + F       T ++   + LKPMNCP H  VF    +SY++L
Sbjct: 300 IGSKNLYVTSGHYAHYGKDSFQ---PIHTPEEDEEYMLKPMNCPHHCEVFAWKPRSYKDL 356

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG+VYR E SG LHGL RVR FTQDDAH+FC  EQ+ NE L++ ++I +++K F
Sbjct: 357 PLRIAEFGTVYRYEKSGELHGLTRVRSFTQDDAHIFCRPEQVKNEFLRVMDIIQAVFKIF 416

Query: 419 GFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            F+    ++S R      K +GSD +W+++E   + ++D  K      ++  +  GE AF
Sbjct: 417 QFDNFEAQISLRDPNNTTKYIGSDEVWEESE---QAIIDACKEKG---LDAKIAYGEAAF 470

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK ++++KDAIGR WQ GTIQVD+NLP RF   Y    + K  PVM+HRA FGS+ERF
Sbjct: 471 YGPKLDFMVKDAIGRRWQLGTIQVDYNLPERFKLEYTAEDNTKKTPVMVHRAPFGSMERF 530

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             ++IE+  G+ PLWL P Q  +  I+    +YAQ +A  L S  +    D RNE I  K
Sbjct: 531 SAVLIEHTTGHFPLWLIPDQVAILPISEKFNDYAQRVAKYLDSVGVRATLDVRNEKIGRK 590

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           IR++ IK++P ++I G+KEA E  + +R+ G      +++
Sbjct: 591 IRDNEIKRVPYMVIVGEKEAEEGLVSMRKQGGGEQATMTM 630


>gi|189501972|ref|YP_001957689.1| threonyl-tRNA synthetase [Candidatus Amoebophilus asiaticus 5a2]
 gi|189497413|gb|ACE05960.1| hypothetical protein Aasi_0559 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 644

 Score =  503 bits (1295), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 256/636 (40%), Positives = 396/636 (62%), Gaps = 31/636 (4%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           + +  PDG+IK+F    T  ++A+SIS  L+++ +A  +NG+V D++ P+ E  +++++T
Sbjct: 6   VNIALPDGTIKSFAKGVTSLEIAQSISERLSQQILASLVNGEVWDITRPITEDAAVKLLT 65

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQI 122
            +D        HS AH+MAEA++S++P +++ IGP I +GFYYD D  +  F +  L +I
Sbjct: 66  WQDEDGKKAFWHSSAHLMAEALESLYPGIKLGIGPAIANGFYYDIDFGDYDFDATHLPRI 125

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E+KM E+  +++ +    ++   A   F+ K + YKVE+LE +    ++T Y+ G + DL
Sbjct: 126 EEKMLELARQNNLYQGIVVNKPAAISFFQKKGDPYKVELLEGL-QDGSITFYKHGNFTDL 184

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+  TG +K   KL+ ++GAYWRG+     L+RIYG  +  Q+EL  YL  LEE++
Sbjct: 185 CRGPHIPHTGFIKAV-KLLNISGAYWRGNEKNKQLTRIYGITFPQQKELKAYLELLEEAQ 243

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           KR+H+K+ +E+ LF  +E  G G+  W  +G  + + L  ++RR ++K  Y+ + TP + 
Sbjct: 244 KRNHQKIGKELKLFTFSEKVGIGLPLWLPRGTVLREQLEQFLRRAQVKAGYQPVVTPHIG 303

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT------FALKPMNCPGHVAVFNHGLKS 354
            + L+  SGH+D Y          +D+ + +RT      F LKPMNCP H  ++ H  +S
Sbjct: 304 HKELYMTSGHYDKY---------GEDSFQPIRTPHEGEEFFLKPMNCPHHCEIYKHEPRS 354

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YR+LPVRLAEFG+VYR E  G LHGL+R RGFTQDDAH+FC  +Q+  E  K+ +L+  +
Sbjct: 355 YRDLPVRLAEFGTVYRYEQHGELHGLVRTRGFTQDDAHIFCRNDQVREEFAKVIDLVTYV 414

Query: 415 YKDFGFEKIMVKLSTR-PE---KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
           +   GF     +LS R PE   K +G    WD AE  ++ V      +   ++NT   LG
Sbjct: 415 FSALGFSDYTARLSFRDPEQLHKYIGDQEDWDKAEEAIEEV------AKLRKLNTTKALG 468

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           E AFYGPK ++++KDA+GR+WQ GT+Q+D+ LP RF+  Y  + ++K  PVMIHRA FGS
Sbjct: 469 EAAFYGPKLDFMVKDALGRNWQLGTVQLDYQLPVRFDLSYTGADNKKHRPVMIHRAPFGS 528

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
           +ERFI I++E+  G LPLWL+P Q  +  I+     YA+E+   L++  +    D R+E 
Sbjct: 529 LERFIAILLEHTAGKLPLWLAPEQVAILPISEKFAAYAEEVNQNLRNKDIRCFIDHRDEK 588

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS 626
           I  KIRE  + KIP + I G+KE  ER++ +R+ G+
Sbjct: 589 IGKKIREAELSKIPYMFIIGEKEQLERTVSVRKQGA 624


>gi|288928013|ref|ZP_06421860.1| threonine--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108]
 gi|288330847|gb|EFC69431.1| threonine--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108]
          Length = 654

 Score =  503 bits (1295), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 258/640 (40%), Positives = 397/640 (62%), Gaps = 21/640 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+TFPDGSI+ +    TG ++A+SIS +LA+  +++ +NGK  +L+ P+ E  +I +  
Sbjct: 2   IKITFPDGSIREYEKGITGLEIAKSISPALARDVLSIGVNGKTTELNRPINEDATIALYK 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ--PFSSDELAQ 121
            +D        HS AH++AEA+Q+++P +Q   GP +E+GF+YD   +   P S ++  +
Sbjct: 62  WDDEEGKHTFWHSSAHLLAEALQALYPGIQFGFGPAVENGFFYDVMTKDGTPISENDFPK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE+KM+E   RD   +++ +S   A + F+   + YK E ++       ++ Y QG + D
Sbjct: 122 IEEKMREFAKRDEAIVRREVSKSDALKEFKEDGQEYKCEHIDLDLEDGTISTYSQGAFTD 181

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ STG +K   KL  VAGA+WRGD+ +  L+RIYG  +  ++ L +YL  LEE+
Sbjct: 182 LCRGPHLMSTGPIKAI-KLTSVAGAFWRGDAQKDQLTRIYGITFPKKKMLDEYLVMLEEA 240

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEINTPQ 298
           +KRDHRK+ +EM+LF  +E  G G+  W  KG ++ +  +  M RKI+    Y+E+ TP 
Sbjct: 241 KKRDHRKIGKEMELFMFSERVGKGLPIWLPKGTEL-RLRLQNMLRKIQKRFGYQEVITPH 299

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +  ++L+  SGH+  Y  + F       T ++   + LKPMNCP H  VF    +SY++L
Sbjct: 300 IGSKNLYVTSGHYAHYGKDSFQ---PIHTPEEDEEYMLKPMNCPHHCEVFAWKPRSYKDL 356

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG+VYR E SG LHGL RVR FTQDDAH+FC  EQ+ NE L++ ++I +++K F
Sbjct: 357 PLRIAEFGTVYRYEKSGELHGLTRVRSFTQDDAHIFCRPEQVKNEFLRVMDIIQAVFKIF 416

Query: 419 GFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            F+    ++S R  K     +GSD +W+++E   + ++D  K      ++  +  GE AF
Sbjct: 417 HFDDFEAQISLRDPKNTTKYIGSDEVWEESE---QAIIDACKEKG---LDAKIAYGEAAF 470

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK ++++KDAIGR WQ GTIQVD+NLP RF   Y    + K  PVM+HRA FGS+ERF
Sbjct: 471 YGPKLDFMIKDAIGRRWQLGTIQVDYNLPERFKLEYTAEDNTKKTPVMVHRAPFGSMERF 530

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             ++IE+  G+ PLWL P Q  +  I+    +YAQ +A    S  +    D RNE I  K
Sbjct: 531 TAVLIEHTAGHFPLWLIPDQVAILPISEKYNDYAQRVAKYFDSVGVRATLDVRNEKIGRK 590

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           IR++ IK++P +++ G+KEA+E  + +R+ G      +S+
Sbjct: 591 IRDNEIKRVPYMVVVGEKEAAEGLVSMRKQGGGEQATMSM 630


>gi|319892730|ref|YP_004149605.1| Threonyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03]
 gi|317162426|gb|ADV05969.1| Threonyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03]
 gi|323464237|gb|ADX76390.1| threonyl-tRNA synthetase [Staphylococcus pseudintermedius ED99]
          Length = 645

 Score =  503 bits (1294), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 260/638 (40%), Positives = 396/638 (62%), Gaps = 21/638 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEI 61
           ++IK+ FPDG+ K F    T  ++A+SIS  L KKAVA   N ++ DL+ P+ E G+IEI
Sbjct: 2   AEIKVQFPDGNEKAFEKGTTTEEIAQSISPGLRKKAVAGKFNQQLVDLTRPLEEDGAIEI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           ITP    +L V+RHS AH+MA+A++ ++ +V   +GP+I+ GFYYDFD E+  SSD+  +
Sbjct: 62  ITPGSDEALEVLRHSTAHLMAQALKRLYGDVHFGVGPVIDGGFYYDFDMEEKVSSDDFEK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK M++II  +    +Q +S ++A+  F +  + YK+E++E+IP  E VTLY QGE+ D
Sbjct: 122 IEKTMKQIIEENHKVERQVVSRDEAKAFFAN--DPYKLELIEAIPQDEQVTLYSQGEFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG HV ST ++K F KL+  AGAYWRGDSN  ML RIYGTA+  +++L  +L  LEE 
Sbjct: 180 LCRGVHVPSTSKIKAF-KLLSTAGAYWRGDSNNKMLQRIYGTAFFDKKDLKAHLQLLEER 238

Query: 242 EKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHR++ +EM+LF   +  G+G+  W   G  I + +  Y+  ++I   Y+ + TP +
Sbjct: 239 KERDHRRIGKEMELFTNNQLVGAGLPLWLPNGATIRREIERYIVDKEISLGYDHVYTPVM 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +  L++ SGHWD Y+ +MF     D          L+PMNCP H+ ++ +   SYRELP
Sbjct: 299 ANVDLYKTSGHWDHYQEDMFPPMQLDAD----EAMVLRPMNCPHHMMIYANKPHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G+++R E SG++ GL RVRG T +DAH+F   +Q+  E  ++  +I+ +Y+DFG
Sbjct: 355 IRIAELGTMHRYEASGAVSGLQRVRGMTLNDAHIFVRPDQIKEEFKRVVQMILDVYEDFG 414

Query: 420 FEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           FE    +LS R +    K    D +W+ AE ++K  +D +    ++ I      GE AFY
Sbjct: 415 FEDYKFRLSYRDKADKEKYYDDDDMWNTAEAMLKEAVDEMNLPYEEAI------GEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G++    T Q+DF LP +F   Y+    E   PV+IHR V  ++ERF+
Sbjct: 469 GPKLDVQVKTAMGKEETLSTAQLDFLLPKKFELTYIGKDGEHHRPVVIHRGVVSTMERFV 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
             + E  KG  P WL+P Q  +  + +    +YA++I + LKS  + +  D RNE + YK
Sbjct: 529 AFLTEETKGAFPTWLAPQQVEIIPVNNDLHYDYARQIHDELKSQGVRVHIDDRNEKMGYK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
           IRE  +KKIP  ++ GDKE     + +R++GS   + V
Sbjct: 589 IREAQMKKIPYQLVVGDKELENNEVNVRQYGSKDQKTV 626


>gi|154490252|ref|ZP_02030513.1| hypothetical protein PARMER_00484 [Parabacteroides merdae ATCC
           43184]
 gi|154089144|gb|EDN88188.1| hypothetical protein PARMER_00484 [Parabacteroides merdae ATCC
           43184]
          Length = 651

 Score =  503 bits (1294), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 259/648 (39%), Positives = 392/648 (60%), Gaps = 19/648 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           IK+TFPD S+K +    T   +AESIS  LA++ +A ++NG++ DL+ P+ ++ +I++  
Sbjct: 2   IKITFPDNSVKEYAEGTTAMQIAESISSRLAQEVLAASVNGEIWDLTRPINQDAAIKLFK 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
            ED        HS AH+MAEA+Q ++P ++  IGP IE+GFYYD D  E      +   I
Sbjct: 62  WEDEEGKHAFWHSSAHLMAEALQELYPGIKFGIGPAIENGFYYDVDPGEATIKEGDFPAI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E KM E++A+     +Q +S   A ++F  + E YK E++  +     +T Y QG + DL
Sbjct: 122 EAKMLELVAKKEEIKRQDISKADALKMFGDRGEEYKTELISEL-EDGKITTYTQGAFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ +T  +K   K+M VAGAYWRGD  R  L R+YG  +  ++ L +YL  +EE++
Sbjct: 181 CRGPHLPNTSYLKAV-KIMSVAGAYWRGDEKRKQLVRLYGITFPKKKMLDEYLALMEEAK 239

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           KRDHRK+ +E++LF  +   G+G+  W  +G ++   L  +++R + K  Y+++ TP + 
Sbjct: 240 KRDHRKIGKELELFTFSTAVGAGLPLWLPRGTQLRLKLEDFLKRIQKKYGYQQVMTPHIG 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            + L+  SGH+  Y  + F       T ++   F LKPMNCP H  +F    +SY++LP+
Sbjct: 300 GKQLYVTSGHYAKYGKDSFQ---PIHTPQEGEEFLLKPMNCPHHCEIFKSFPRSYKDLPL 356

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R AEFG+VYR E SG LHGL RVRGFTQDDAH+FC  +Q+ +E LK+ ++I  I+K   F
Sbjct: 357 RFAEFGTVYRYEQSGELHGLTRVRGFTQDDAHLFCRPDQLKDEFLKVMDIIFIIFKALDF 416

Query: 421 EKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           E    ++S R     +K +GS+  W+ AE+ +      I+   +  +   +  GE AFYG
Sbjct: 417 ENFEAQISLRDKVNRDKYIGSEENWEKAESAI------IEACQEKGLKAKIEYGEAAFYG 470

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK ++++KDAIGR WQ GTIQVD+NLP RF   Y    ++K  PVMIHRA FGS+ERF+ 
Sbjct: 471 PKLDFMVKDAIGRRWQLGTIQVDYNLPERFELEYTGEDNKKHRPVMIHRAPFGSMERFVA 530

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           ++IE+  G  PLWL+P Q  +  I+    +YA E+   L++  LS+  D RNE I  KIR
Sbjct: 531 VLIEHTGGKFPLWLTPDQVAILPISEKFNDYAYEVKRQLEAEDLSVLVDDRNEKIGRKIR 590

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  +K+IP ++I G+KEA    + +R+ G      + +     +L  E
Sbjct: 591 DTELKRIPYMLIVGEKEAENNEVSVRKQGEGDKGSMKITTFAALLKGE 638


>gi|295397484|ref|ZP_06807567.1| threonine--tRNA ligase [Aerococcus viridans ATCC 11563]
 gi|294974284|gb|EFG50028.1| threonine--tRNA ligase [Aerococcus viridans ATCC 11563]
          Length = 656

 Score =  503 bits (1294), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 258/634 (40%), Positives = 396/634 (62%), Gaps = 22/634 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           I L FPDG+ K+F    TG DVA SIS SLAK+A+A  I+G++ DL+ P+ EG +IEI+ 
Sbjct: 16  IDLVFPDGAKKSFEAGVTGRDVAASISNSLAKRALAAKIDGELVDLNAPINEGGAIEIVD 75

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+   +L ++RHS AH+MA+A++ ++P ++  +GP IE G+YYD D+E+  + ++L  IE
Sbjct: 76  PKHEDALGILRHSTAHLMAQAMKRLYPGIKFGVGPAIETGYYYDTDQEKQITEEDLPVIE 135

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M +I+  + P  ++ ++  +A E+F    + YK+EI+  +P  E +T+Y QGE+ DLC
Sbjct: 136 AEMAKIVKENYPIERREVTRAEANEIFAD--DEYKLEIIADLPEDETLTVYSQGEFTDLC 193

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RG HV STG +K+F KL+ VAGAYWRG+S+  M+ R+YGTA+  +++L +++   EE+++
Sbjct: 194 RGIHVPSTGYIKEF-KLLSVAGAYWRGNSDNKMMQRVYGTAFFEKRDLKEFIKQREEAKE 252

Query: 244 RDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLD 301
           RDHRKL +E+D+F +  E GSG+ FW  KG  I + +  Y+  K +   YE + TP + D
Sbjct: 253 RDHRKLGKELDIFMVNPEVGSGLPFWLPKGATIRRIIERYIIDKEVSLGYEHVYTPIMAD 312

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             L++ SGHWD Y  +MF        + D     L+PMNCP H+ V+ + + SYRE PVR
Sbjct: 313 VELYKTSGHWDHYHEDMFPPM----DMGDGEQLVLRPMNCPHHMMVYKNDIHSYREFPVR 368

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AE G ++R E SG+L GL RVR  T +DAH+F   +Q+  E  ++  LI  +Y DF   
Sbjct: 369 IAELGMMHRYEKSGALSGLQRVREMTLNDAHIFVRPDQIKEEFTRVIELIKQVYDDFNIT 428

Query: 422 KIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
               +LS R     +K    D +W+ A+ ++K  +D +     + I      GE AFYGP
Sbjct: 429 DYRFRLSYRDPNNTDKYFDDDEMWEKAQAMLKEAMDDLGLEYFEAI------GEAAFYGP 482

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH-PVMIHRAVFGSIERFIG 536
           K +  +K A+G +    T+Q+DF LP RF+  YV    +  H PV+IHR V  ++ERF+ 
Sbjct: 483 KLDVQMKTALGNEETMSTVQLDFLLPERFDLTYVGQDGQDTHRPVVIHRGVVSTMERFVA 542

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            +IE +KG  P WL+P+QA +  +   A  E+ +EI   +K+  + +E D RNE + YKI
Sbjct: 543 YLIEEYKGAFPTWLAPVQAKLIPVNDEAHGEHVEEIRRRMKAAGMRVEVDNRNEKMGYKI 602

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           RE   +KIP  ++ GD E +E ++ +RR+GS  T
Sbjct: 603 REAQTQKIPYQLVFGDNEIAENTVTVRRYGSKET 636


>gi|189499158|ref|YP_001958628.1| threonyl-tRNA synthetase [Chlorobium phaeobacteroides BS1]
 gi|238692225|sp|B3EKG9|SYT_CHLPB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|189494599|gb|ACE03147.1| threonyl-tRNA synthetase [Chlorobium phaeobacteroides BS1]
          Length = 659

 Score =  502 bits (1293), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 259/651 (39%), Positives = 407/651 (62%), Gaps = 18/651 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           + +TFPDG   + P  ++G D+A+SI  SLA++A+A+ ING++ DL   V +  ++EIIT
Sbjct: 11  VTVTFPDGRNMSIPSGSSGYDIAQSIGHSLAREALAIRINGELADLGTAVTDDATVEIIT 70

Query: 64  PEDPRSLA--VIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
            + P +    +  HS +HIMA+A++ ++P  +   GP +E GFYYD   E  F+ ++L +
Sbjct: 71  FDHPGATGKHIFWHSASHIMAQAIEELFPGTKFGAGPAVEQGFYYDIASEHRFNEEDLQK 130

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELF-ESKKEAYKVEILE-SIPAKENVTLYRQGEW 179
           IE++M +I  R     ++ +  EKA   F ES+K+ YKVEIL+ ++   ++V++Y QG +
Sbjct: 131 IEQQMLDISKRSIDIRREEMPREKAIAFFSESRKDPYKVEILQDTLKEADSVSIYHQGAF 190

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLC GPH+ +T ++K   KL  ++ ++WRGDS+R  + RIYG A+ + + L Q+L  LE
Sbjct: 191 ADLCSGPHLPNTSKLKAV-KLTNISASFWRGDSSRESMQRIYGIAFPSAKLLKQHLARLE 249

Query: 240 ESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTP 297
           E++KRDHRKL  E++LF +++D GSG+  W  KG  I   L ++++  + K  Y  + TP
Sbjct: 250 EAKKRDHRKLGAELELFMLSQDVGSGLPIWLPKGAIIRSELEAFLKEEQRKRGYVPVYTP 309

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  L+++SGH+  Y  + F      D +     + LKPMNCP H  +++  L+SYR+
Sbjct: 310 HIGNIDLYKRSGHYPYYSDSQFPPLTYKDDLGREEQYLLKPMNCPHHHLIYSSQLRSYRD 369

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFG+VYR+E SG L+GL+R RGFTQDD+H++C  +Q+ +E     +L   ++  
Sbjct: 370 LPIRMAEFGTVYRHEQSGELNGLIRARGFTQDDSHIYCRPDQLVDEICAAIDLTKFVFTT 429

Query: 418 FGFEKIMVKLSTR-PE---KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
            GF+ I V+LS   PE   K  G++ +W  AE  ++   D ++      IN  + +GE +
Sbjct: 430 LGFDDIEVRLSLHDPENQGKYGGTEEVWKQAEKDVREAADRME------INYVIGIGEAS 483

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK ++I++DA+GR WQ GT+QVD+ +P RF+  Y+ S  +   PV+IHRA FGS+ER
Sbjct: 484 FYGPKIDFIVRDALGRKWQLGTVQVDYVMPERFDLSYIGSDGKPHRPVIIHRAPFGSMER 543

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           FIG++IE+  GN PLWL+P+Q  V  IT     YA+ +  +L  + +  + D R+E I  
Sbjct: 544 FIGVLIEHTAGNFPLWLAPVQVAVLPITEEVHAYAERVHQMLIDNGIRADLDIRSEKIGK 603

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIRE  + KIP ++I G KEA    I +RR        ++L     +L KE
Sbjct: 604 KIREAEVGKIPYMVIIGQKEADSEEISLRRHRKGDQGSLTLQALKDMLVKE 654


>gi|194333013|ref|YP_002014873.1| threonyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271]
 gi|238693296|sp|B4S3D2|SYT_PROA2 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|194310831|gb|ACF45226.1| threonyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271]
          Length = 657

 Score =  502 bits (1293), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 260/626 (41%), Positives = 389/626 (62%), Gaps = 20/626 (3%)

Query: 9   FPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPEDP 67
            PDG  ++FP   TG D+A SI + LA+ A+AV ING+  DL  PV E  SIEI+T + P
Sbjct: 15  LPDGESRSFPFGTTGYDIARSIGKKLAQDALAVVINGRAQDLDSPVSEDASIEIVTFDHP 74

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQ 127
               +  HS +HIMA A++ ++P  +   GP IE GFYYD      F+  +L  IE +M 
Sbjct: 75  LGKEIFWHSASHIMAHAIEELFPGSRFGAGPAIEQGFYYDIASSHRFTESDLHDIETRMI 134

Query: 128 EIIARDSPFLKQYLSHEKARELFES-KKEAYKVEILE-SIPAKENVTLYRQGEWFDLCRG 185
           EI  R     ++ LS + A + F S +K+ YKVEILE ++     V++Y QGE+ DLC G
Sbjct: 135 EIGRRAIDVRREELSRQAAIDFFSSTRKDPYKVEILEDTLKDTPTVSIYHQGEFADLCTG 194

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PH+ +T ++K   KL  ++ ++WRGDS+R  + RIYG A+ +++ L Q+L  +EE++KRD
Sbjct: 195 PHLPNTSKLKAV-KLTNISASFWRGDSSRESMQRIYGIAFPSEKLLKQHLAHIEEAKKRD 253

Query: 246 HRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQH 303
           HRKL  E++LF ++ E GSG+  W  KG  +   L S++R  + K  Y  + TP + +  
Sbjct: 254 HRKLGAELELFMLSPEVGSGLPIWLPKGAIVRNELESFLREEQRKRGYVPVYTPHIGNIG 313

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           L+++SGH+  Y  + F      D +     + LKPMNCP H  +++  L+SYR+LP+RL 
Sbjct: 314 LYKRSGHYPYYSESQFPPLTYTDDLGREEQYLLKPMNCPHHHMIYSSKLRSYRDLPIRLT 373

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFG+VYR+E SG L+GL+R RGFTQDD+H++C  +Q+ +E     +L   ++   GF+ I
Sbjct: 374 EFGTVYRHEQSGELNGLIRARGFTQDDSHIYCRPDQLVDEICNAIDLTKFVFATLGFDDI 433

Query: 424 MVKLSTR-PE---KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL--LGEGAFYGP 477
            ++LS   PE   K  G+  +W+ AE  ++         + DR+N      +GE +FYGP
Sbjct: 434 QIRLSLHDPENQDKYGGTKEVWEQAEKDVR--------EAADRMNIDYFTGIGEASFYGP 485

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K ++I++DAIGR WQ GT+QVD+ +P RF+  Y+ S  +   PV+IHRA FGS+ERFIG+
Sbjct: 486 KIDFIVRDAIGRKWQLGTVQVDYVMPERFDLSYIGSDGQPHRPVIIHRAPFGSMERFIGV 545

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE+  GN PLWL+P+Q  V  IT    +YA ++ + L +  + +E D R+E I  KIRE
Sbjct: 546 LIEHTGGNFPLWLAPVQIAVLPITDEVHDYAVQVRDTLHAAGMRVELDTRSEKIGKKIRE 605

Query: 598 HSIKKIPIIIICGDKEASERSIGIRR 623
             + KIP ++I G KEA+   + +RR
Sbjct: 606 SEVAKIPYMVIIGQKEAAAGEVSLRR 631


>gi|282877699|ref|ZP_06286514.1| threonine--tRNA ligase [Prevotella buccalis ATCC 35310]
 gi|281300271|gb|EFA92625.1| threonine--tRNA ligase [Prevotella buccalis ATCC 35310]
          Length = 654

 Score =  502 bits (1292), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 256/642 (39%), Positives = 390/642 (60%), Gaps = 21/642 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           +K+TFPDGS++ +    TG  +AESIS +LA+  V+  +NG+  +L+ P+ E  +I +  
Sbjct: 2   VKITFPDGSVREYEKGVTGLQIAESISPALARNVVSCGVNGETVELNRPINEDATIALYR 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ--PFSSDELAQ 121
            ED        HS AH++AEA++ ++P +Q   GP IE+GF+YD       P S ++  +
Sbjct: 62  FEDEEGKHTFWHSSAHLLAEALKELYPGIQFGFGPAIENGFFYDVQTADGTPISENDFPK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE+KM E+  ++ P +++ LS   A   F +  + YKVE +       N++ Y QG + D
Sbjct: 122 IEQKMMELAKKNQPIVRRELSKADAVNEFTADGQTYKVEHIVEDLEDGNISTYTQGNFTD 181

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ STG +K   K+  VAGA+WRGD+    L+RIYG  +  ++ L +YL  LEE+
Sbjct: 182 LCRGPHLMSTGLIKAV-KITSVAGAFWRGDAKNTQLTRIYGITFPKKKMLDEYLLMLEEA 240

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEINTPQ 298
           +KRDHRK+ +EM+LF  ++  G G+  W  KG ++ +  +  M RKI+    Y+E+ TP 
Sbjct: 241 KKRDHRKIGKEMELFMFSDRVGKGMPIWLPKGTEL-RLRLQEMLRKIQKRFGYQEVITPH 299

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +  ++L+  SGH+  Y  + F       T +D   + LKPMNCP H  VF    +SY++L
Sbjct: 300 IGSKNLYVTSGHYAHYGKDSFQ---PIHTPEDDEEYMLKPMNCPHHCEVFACKPRSYKDL 356

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG+VYR E SG LHGL RVR FTQDDAH+FC  +Q+ NE L++ ++I +++  F
Sbjct: 357 PLRIAEFGTVYRYEKSGELHGLTRVRSFTQDDAHIFCRPDQVKNEFLRVMDIIQAVFTIF 416

Query: 419 GFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            F+    ++S R     EK +GSD +W ++E  +      I+   +  ++  V  GE AF
Sbjct: 417 NFDNFEAQISLRDPNDKEKYIGSDEVWAESEQAI------IEACKEKGLDAKVAYGEAAF 470

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK ++++KDAIGR WQ GTIQVD+NLP RF   Y    + K  PVM+HRA FGS+ERF
Sbjct: 471 YGPKLDFMVKDAIGRRWQLGTIQVDYNLPQRFKLEYTAEDNTKQTPVMVHRAPFGSLERF 530

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             ++IE+  G+ PLWL+P Q  +  I+     YAQ++        +    D RNE I  K
Sbjct: 531 TAVLIEHTAGHFPLWLTPEQVAILPISEKFNGYAQQVVKYFTEQDIRATIDDRNEKIGRK 590

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
           IR++ +K++P ++I G+KEA+E  + +R+ G      + + D
Sbjct: 591 IRDNELKRVPYMVIVGEKEAAEGLVSMRKQGGGEQATMKMED 632


>gi|305664643|ref|YP_003860930.1| threonyl-tRNA synthetase [Maribacter sp. HTCC2170]
 gi|88707344|gb|EAQ99590.1| threonyl-tRNA synthetase [Maribacter sp. HTCC2170]
          Length = 646

 Score =  502 bits (1292), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 264/648 (40%), Positives = 393/648 (60%), Gaps = 19/648 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+T PDG++K +   +T  D+A+SIS  LA+  ++   N  + +   P+ E GS+ + T
Sbjct: 2   IKITLPDGTVKEYSKGSTAMDIAKSISEGLARNVISAKFNDTIIETVTPIIEDGSLTLFT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQI 122
             +        HS +HI+A+A++ ++P  ++ IGP IE+GFYYD D  E   S  +   I
Sbjct: 62  WNNDEGKKAFWHSSSHIVAQALEELFPGAKLTIGPAIENGFYYDVDFGEHTVSDKDFPAI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EKK  EI      F  + +S ++A E ++S+K  +KVE++E++     +T      + DL
Sbjct: 122 EKKALEIARGKHDFKMRSVSKQEALEKYKSQKNEFKVELIENL-EDGTITFCDHDTFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRG H+ +TG VK   K++ VAGAYWRGD     L+R+YG ++  Q+ELT YL  LEE++
Sbjct: 181 CRGGHIPNTGIVKAI-KILSVAGAYWRGDEKNKQLTRVYGISFPKQKELTAYLQLLEEAK 239

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           KRDHRKL +E++LF  ++  G G+  W  KG  + + L  ++++ + K  YE + TP + 
Sbjct: 240 KRDHRKLGKELELFTFSQKVGQGLPLWLPKGAALRERLEQFLKKAQKKAGYEMVVTPHIG 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            + L+  SGH+  Y  + F       T KD   F LKPMNCP H  ++N    SYRELP 
Sbjct: 300 QKELYVTSGHYAKYGEDSFQ---PIHTPKDDEEFLLKPMNCPHHCEIYNSRPFSYRELPK 356

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R AEFG+VYR E SG LHGL RVRGFTQDDAH+FCT +Q+  E   + +L + +    GF
Sbjct: 357 RYAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCTPDQLDQEFKDVIDLSLYVLSSLGF 416

Query: 421 EKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           E    ++S R    PEK +GS   W+ AEN    +++  K    D +   V  GE AFYG
Sbjct: 417 ENFKAQVSVRDLDTPEKYIGSVENWEKAEN---AIINAAKEKGLDFV---VESGEAAFYG 470

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK ++++KDA+GR+WQ GTIQVD+NLP RF+  Y  S +E   PVMIHRA FGS+ERF+ 
Sbjct: 471 PKLDFMVKDALGRNWQLGTIQVDYNLPERFDLTYKGSDNESHRPVMIHRAPFGSMERFVA 530

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +++E+  GN PLWL P QAI+  ++    +YA+++ N L+++ +    D RNET+  KIR
Sbjct: 531 LLLEHTGGNFPLWLIPEQAIILPVSEKHEKYAEKVLNSLENNEIRALIDNRNETVGKKIR 590

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           E  + K+P ++I G+ E    +I +RR G      +++   + ++TKE
Sbjct: 591 EAEMGKLPFMLIVGESEEENNTIAVRRHGGEDIGSINVQAFVDLVTKE 638


>gi|29345832|ref|NP_809335.1| threonyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
 gi|73919769|sp|Q8AAP2|SYT_BACTN RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|29337725|gb|AAO75529.1| threonyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
          Length = 646

 Score =  502 bits (1292), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 261/648 (40%), Positives = 392/648 (60%), Gaps = 19/648 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIEIITP 64
           IK+TFPDGS++ +     G  +AESIS  LA+  +A  +NG+  DL  P+ E +  ++  
Sbjct: 2   IKITFPDGSVREYNEGVNGLQIAESISSRLAQDVLACGVNGETYDLGRPINEDADFVLYK 61

Query: 65  -EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
            +D        H+ AH++AEA+Q ++P +Q  IGP IE+GFYYD D  E      +L  I
Sbjct: 62  WDDEEGKHAFWHTSAHLLAEALQELYPGIQFGIGPAIENGFYYDVDPGEAVIKESDLPAI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E KM E+ A+    +++ +S   A ++F  + E YK E++  +    ++T Y QG + DL
Sbjct: 122 EAKMLELSAKKDAVVRESISKTDALKMFGDRGETYKCELISEL-EDGHITTYTQGAFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ +T  +K   KL  VAGAYWRG  +R ML+RIYG  +  ++ L +YL  LEE++
Sbjct: 181 CRGPHLMTTAPIKAI-KLTTVAGAYWRGHEDRKMLTRIYGITFPKKKMLDEYLVLLEEAK 239

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           KRDHRK+ +EM LF  +E  G G+  W  KG  +   L  ++RR + + DY+E+ TP + 
Sbjct: 240 KRDHRKIGKEMQLFMFSETVGKGLPMWLPKGTALRLRLQEFLRRIQTRYDYQEVITPPIG 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ L+  SGH+  Y  + F       T ++   + LKPMNCP H  ++ +  +SY++LP+
Sbjct: 300 NKLLYVTSGHYAKYGKDAFQ---PIHTPEEGEEYFLKPMNCPHHCEIYKNFPRSYKDLPL 356

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AEFG+V R E SG LHGL RVR FTQDDAH+FC  +Q+ +E L++ ++I  +++   F
Sbjct: 357 RIAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKDEFLRVMDIISIVFRSMNF 416

Query: 421 EKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           +    ++S R     EK +GSD  W+ AE  +      I+   +  +   +  GE AFYG
Sbjct: 417 QNFEAQISLRDKVNREKYIGSDDNWEKAEQAI------IEACEEKGLPAKIEYGEAAFYG 470

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK ++++KDAIGR WQ GTIQVD+NLP RF   Y+ S ++K  PVMIHRA FGS+ERF+ 
Sbjct: 471 PKLDFMVKDAIGRRWQLGTIQVDYNLPERFELEYMGSDNQKHRPVMIHRAPFGSMERFVA 530

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           ++IE+  G  PLWL+P Q  +  I+    EYA+++   LK H +    D RNE I  KIR
Sbjct: 531 VLIEHTAGKFPLWLTPDQVAILPISEKFNEYAEQVKMYLKMHEIRAIVDDRNEKIGRKIR 590

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           ++ +K+IP ++I G+KEA    + +RR G      +   +   IL +E
Sbjct: 591 DNEMKRIPYMLIVGEKEAENGEVSVRRQGEGDKGTMKYEEFAKILNEE 638


>gi|302550176|ref|ZP_07302518.1| threonyl-tRNA synthetase [Streptomyces viridochromogenes DSM 40736]
 gi|302467794|gb|EFL30887.1| threonyl-tRNA synthetase [Streptomyces viridochromogenes DSM 40736]
          Length = 658

 Score =  502 bits (1292), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 277/669 (41%), Positives = 392/669 (58%), Gaps = 48/669 (7%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEI 61
           SD+++     S +   V  TG+  AE  +    +  +A  + G++ DLS  + EG  +E 
Sbjct: 2   SDVRVIIQRDSEREERVVTTGTTAAELFAGE--RSIIAARVAGELRDLSYTLAEGDEVEG 59

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +       L ++RHS AH+MA+AVQ ++PE ++ IGP ++DGFYYDFD E+PF+ ++L  
Sbjct: 60  VEISSEDGLNILRHSTAHVMAQAVQELFPEAKLGIGPPVKDGFYYDFDVEKPFTPEDLKA 119

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE-------------SIPAK 168
           IEKKMQEI  R   F ++ ++ E ARE  E   E YK+E++               + A 
Sbjct: 120 IEKKMQEIQKRGQKFARRAVTDEAARE--ELANEPYKLELIGLKGSASSDDGADVEVGAG 177

Query: 169 ENVTLY-----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIY 221
           E +T+Y     + GE  W DLCRGPH+ ST  +  F KLM+ A AYWRG    PML RIY
Sbjct: 178 E-LTIYDNLDAKTGELCWKDLCRGPHLPSTRAIPAF-KLMRNAAAYWRGSEKNPMLQRIY 235

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLI 280
           GTAW T+ EL Q+L FL E+EKRDHRKL  E+DLF + E  GSG+  +H KG  I + + 
Sbjct: 236 GTAWPTKDELKQHLEFLAEAEKRDHRKLGSELDLFSVPEQIGSGLAVFHPKGGIIRRVME 295

Query: 281 SYMRRKIKDD-YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPM 339
            Y RR+ +++ YE + TP      L++ SGH D Y   M+     D+ +     + LKPM
Sbjct: 296 DYSRRRHEEEGYEFVYTPHATKGKLFETSGHLDWYADGMYPPMQLDEGVD----YYLKPM 351

Query: 340 NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQ 399
           NCP H  +F+   +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDDAH++CT+EQ
Sbjct: 352 NCPMHNLIFDARGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYCTREQ 411

Query: 400 MFNECLKIHNLIISIYKDFGFEKIMVKLSTR-PEKRVGSDALWDDAENIMKGVLDTIKNS 458
           M  E  K    ++ + +D+G     ++LST+ PEK VGSD  W++A   ++ V +     
Sbjct: 412 MAEELDKTLTFVLGLLRDYGLTDFYLELSTKDPEKFVGSDEAWEEATETLRQVAE----- 466

Query: 459 SQDRINTGVLL----GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH 514
                  G+ L    G  AFYGPK     KDAIGR WQ  TIQ+DFNLP RF+  Y  + 
Sbjct: 467 -----KQGLPLVPDPGGAAFYGPKISVQTKDAIGRTWQMSTIQLDFNLPERFDLEYTGAD 521

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANL 574
             K  PVMIHRA+FGSIERF  +++E++ G  P WL+P+QA+   I  + VEY ++ A  
Sbjct: 522 GAKQRPVMIHRALFGSIERFFAVLLEHYAGAFPAWLAPVQAVGIPIGDAHVEYLEKFAAA 581

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
            K   L +E D  ++ +  KIR    +K+P ++I GD++ S  S+  R    +    +  
Sbjct: 582 AKRKGLRVEVDSSSDRMQKKIRNAQKQKVPFMVIAGDEDMSHGSVSFRYRDGSQENGIPF 641

Query: 635 LDAIPILTK 643
            +AI  + K
Sbjct: 642 DEAIAKIQK 650


>gi|153808043|ref|ZP_01960711.1| hypothetical protein BACCAC_02329 [Bacteroides caccae ATCC 43185]
 gi|149129652|gb|EDM20866.1| hypothetical protein BACCAC_02329 [Bacteroides caccae ATCC 43185]
          Length = 646

 Score =  502 bits (1292), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 259/648 (39%), Positives = 394/648 (60%), Gaps = 19/648 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIEIITP 64
           IK+TFPDGS++ +     G  +AESIS  LA+  +A  +NG+  DL  P+ E +  ++  
Sbjct: 2   IKITFPDGSVREYNEGVNGLQIAESISSRLAQDVLACGVNGETYDLGRPINEDADFVLYK 61

Query: 65  -EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
            +D        H+ AH++AEA+Q ++P +Q  IGP IE+GFYYD D  E      +L  I
Sbjct: 62  WDDEEGKHAFWHTSAHLLAEALQELYPGIQFGIGPAIENGFYYDVDPGEAVIKESDLPAI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E KM E+ A+    +++ ++   A ++F  + E YK E++  +    ++T Y QG + DL
Sbjct: 122 EAKMLELSAKKEAVVRKSIAKTDALKMFGDRGETYKCELISEL-EDGHITTYTQGAFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ +T  +K   KL  VAGAYWRG  +R ML+RIYG  +  ++ L +YL  LEE++
Sbjct: 181 CRGPHLMTTAPIKAI-KLTSVAGAYWRGHEDRKMLTRIYGITFPKKKMLDEYLALLEEAK 239

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           KRDHRK+ +EM LF  +E  G G+  W  KG  +   L  ++RR + + DY+E+ TP + 
Sbjct: 240 KRDHRKIGKEMQLFMFSETVGKGLPMWLPKGTALRLRLQDFLRRIQTRYDYQEVITPPIG 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ L+  SGH+  Y  + F       T ++   + LKPMNCP H  ++ +  +SY++LP+
Sbjct: 300 NKLLYVTSGHYAKYGKDAFQ---PIHTPEEGEEYFLKPMNCPHHCEIYKNFPRSYKDLPL 356

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AEFG+V R E SG LHGL RVR FTQDDAH+FC  +Q+ +E L++ ++I  +++   F
Sbjct: 357 RIAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKDEFLRVMDIISIVFRSMNF 416

Query: 421 EKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           +    ++S R     EK +GSD  W+ AE  +      I+   +  +   +  GE AFYG
Sbjct: 417 QNFEAQISLRDKVNREKYIGSDDNWEKAEQAI------IEACEEKGLPAKIEYGEAAFYG 470

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK ++++KDAIGR WQ GTIQVD+NLP RF   Y+ S ++K  PVMIHRA FGS+ERF+ 
Sbjct: 471 PKLDFMVKDAIGRRWQLGTIQVDYNLPERFELEYMGSDNQKHRPVMIHRAPFGSMERFVA 530

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           ++IE+  G  PLWL+P Q ++  I+    +YA+++   LK+H +    D RNE I  KIR
Sbjct: 531 VLIEHTAGKFPLWLTPEQVVILPISEKFNDYAEQVKMYLKTHEIRAIVDDRNEKIGRKIR 590

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           ++ +K+IP ++I G+KEA    + +RR G      +   +   IL +E
Sbjct: 591 DNEMKRIPYMLIVGEKEAENGEVSVRRQGEGDKGTMKFEEFAKILNEE 638


>gi|260583498|ref|ZP_05851246.1| threonine--tRNA ligase [Granulicatella elegans ATCC 700633]
 gi|260158124|gb|EEW93192.1| threonine--tRNA ligase [Granulicatella elegans ATCC 700633]
          Length = 647

 Score =  502 bits (1292), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 262/642 (40%), Positives = 400/642 (62%), Gaps = 28/642 (4%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+TFPDG++K F    +  +VAESIS+SLAKKA+A  +NG++ DL   + E  SIEI+T
Sbjct: 2   IKVTFPDGAVKEFEQGISVKEVAESISKSLAKKALAGKVNGELVDLDQALTEDASIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+   +L ++RHS AH++A A+  ++P +   +GP IE GFYYD D     + D L ++E
Sbjct: 62  PDHEDALGILRHSTAHLLAHALTRLYPGIHFGVGPAIESGFYYDTDMPNQLTEDALPEVE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M +I+  + P +++ +S  +A E+F +  + YKVE++  +P  E +++Y+Q ++ DLC
Sbjct: 122 AEMMKIVKENYPIVRREVSRAEALEIFAN--DPYKVELINGLPEDETISVYQQEDFVDLC 179

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RG HV STG+++  FKL+ +AGAYWRG+S+  M+ R+YGTA+  + +L ++L   EE+++
Sbjct: 180 RGIHVPSTGRIQ-VFKLLSLAGAYWRGNSDNKMMQRVYGTAFFDKADLKEFLKMREEAKE 238

Query: 244 RDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLD 301
           RDHRKL +E+DLF I+++ GSG+ FW  KG  I +T+  Y+  ++I   Y+ + TP + D
Sbjct: 239 RDHRKLGKELDLFMISQEVGSGLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPVMAD 298

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             L++ SGHW  Y+ +MF        + D     L+PMNCP H+ V+ + + SYRELP+R
Sbjct: 299 VGLYKTSGHWAHYQEDMFPPM----DMGDGELLVLRPMNCPHHMMVYKNHIHSYRELPIR 354

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  +I +LI  +YKDF  +
Sbjct: 355 IAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRILDLIREVYKDFNVK 414

Query: 422 KIMVKLSTR-PE---KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
               +LS R PE   K    D +W+ AE ++K  +D +     + I      GE AFYGP
Sbjct: 415 DYRFRLSYRDPEDKHKYFDDDEMWNKAEAMLKEAMDEMGLEYFEAI------GEAAFYGP 468

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH-PVMIHRAVFGSIERFIG 536
           K +   K A+G +    TIQ+DF LP RF+  YV    +  H PV+IHR V  + ERF+ 
Sbjct: 469 KLDIQFKTAMGLEETMSTIQLDFLLPERFDLTYVGEDGDNTHRPVVIHRGVVSTAERFVA 528

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLS----IETDFRNETIN 592
            +IE +KG  P WL+P+QA   TI   +VE+  + A  LK   +S    +E D RNE + 
Sbjct: 529 YLIEEYKGAFPTWLAPVQA---TIIPVSVEHHYDAARALKEKMMSLGLRVELDDRNEKMG 585

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           YKIR    +KIP  ++ GDKE  E ++ +RR+GS  T  +++
Sbjct: 586 YKIRASQTQKIPYQLVIGDKEVEEGTVTVRRYGSKETVSMTI 627


>gi|218259669|ref|ZP_03475318.1| hypothetical protein PRABACTJOHN_00977 [Parabacteroides johnsonii
           DSM 18315]
 gi|218224962|gb|EEC97612.1| hypothetical protein PRABACTJOHN_00977 [Parabacteroides johnsonii
           DSM 18315]
          Length = 651

 Score =  501 bits (1291), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 256/629 (40%), Positives = 387/629 (61%), Gaps = 19/629 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           IK+TFPD S+K +    T   +AESIS  LA++ +A ++NG++ DL+ P+ ++ +I++  
Sbjct: 2   IKITFPDNSVKEYAEGTTAMQIAESISSRLAQEVLAASVNGEIWDLTRPINQDAAIKLFK 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
            ED        HS AH+MAEA+Q ++P ++  IGP IE+GFYYD D  +      +   I
Sbjct: 62  WEDEEGKHAFWHSSAHLMAEALQELYPGIKFGIGPAIENGFYYDVDPGDAVIKEGDFPAI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E KM E++A+     +Q +S   A ++F  + E YK E++  +     +T Y QG + DL
Sbjct: 122 EAKMLELVAKKEEIKRQDISKADAMKMFGDRGEVYKTELISEL-EDGKITTYTQGSFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ +T  +K   K+M VAGAYWRGD  R  L R+YG  +  ++ L +YL  +EE++
Sbjct: 181 CRGPHLPNTSYLKAV-KIMSVAGAYWRGDEKRKQLVRLYGITFPKKKMLDEYLALMEEAK 239

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           KRDHRK+ +E++LF  +   G+G+  W  +G ++   L  +++R + K  Y+++ TP + 
Sbjct: 240 KRDHRKIGKELELFTFSTAVGAGLPLWLPRGTQLRLKLEDFLKRIQKKYGYQQVMTPHIG 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            + L+  SGH+  Y  + F       T ++   F LKPMNCP H  +F    +SY++LP+
Sbjct: 300 GKQLYVTSGHYAKYGKDSFQ---PIHTPQEGEEFLLKPMNCPHHCEIFKSFPRSYKDLPL 356

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R AEFG+VYR E SG LHGL RVRGFTQDDAH+FC  +Q+ +E LK+ ++I  I+K   F
Sbjct: 357 RFAEFGTVYRYEQSGELHGLTRVRGFTQDDAHLFCRPDQLKDEFLKVMDIIFIIFKALDF 416

Query: 421 EKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           E    ++S R     +K +GS+  W+ AE+ +      I+   +  +   +  GE AFYG
Sbjct: 417 ENFEAQISLRDKVNRDKYIGSEENWEKAESAI------IEACQEKGLKAKIEYGEAAFYG 470

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK ++++KDAIGR WQ GTIQVD+NLP RF   Y    ++K  PVMIHRA FGS+ERF+ 
Sbjct: 471 PKLDFMVKDAIGRRWQLGTIQVDYNLPERFELEYTGEDNKKHRPVMIHRAPFGSMERFVA 530

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           ++IE+  G  PLWL+P Q  +  I+    +YA E+   L++  LS+  D RNE I  KIR
Sbjct: 531 VLIEHTGGKFPLWLTPDQVSILPISEKFNDYAYEVKRQLEAEDLSVLVDDRNEKIGRKIR 590

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFG 625
           +  +K+IP ++I G+KEA    + +R+ G
Sbjct: 591 DTELKRIPYMLIVGEKEAENNEVSVRKQG 619


>gi|125624939|ref|YP_001033422.1| ThrS protein [Lactococcus lactis subsp. cremoris MG1363]
 gi|166223350|sp|A2RN48|SYT_LACLM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|124493747|emb|CAL98736.1| ThrS protein [Lactococcus lactis subsp. cremoris MG1363]
 gi|300071738|gb|ADJ61138.1| threonyl-tRNA synthetase [Lactococcus lactis subsp. cremoris
           NZ9000]
          Length = 646

 Score =  501 bits (1291), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 266/644 (41%), Positives = 400/644 (62%), Gaps = 23/644 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           IK+TFPDG+IK F    T  ++A+SIS SLAKK +A  +NGK+ D +  + E S  EI+T
Sbjct: 2   IKITFPDGNIKEFESGVTTFEIAKSISPSLAKKTLAGKVNGKLIDATRAINEDSNFEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQI 122
           P+   +L ++RHS AH+ A+A +  +P + + +GP I+DGFYYD D E    S+D+LA I
Sbjct: 62  PDHEDALGILRHSAAHLFAQAAKRHFPNIHLGVGPAIQDGFYYDTDNEAGQISNDDLATI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWFD 181
           E +M++I+  +    ++ +S E+A+E+F S  + YK+E++E     E  +T+Y QGE+ D
Sbjct: 122 EAEMKKIVKENFKSERKEVSKEEAKEIFAS--DPYKLELIEEHNEDEGGLTIYTQGEYTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG V KFF L+ VAGAYWRG+S+  M+ RIYGTAW +++EL   L   EE+
Sbjct: 180 LCRGPHVPSTG-VIKFFHLLNVAGAYWRGNSDNKMMQRIYGTAWFSKEELEANLKLREEA 238

Query: 242 EKRDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL RE+DLF + AE G+G  +W   G  I + +  ++  +++K+ Y+ + TP +
Sbjct: 239 KERDHRKLGRELDLFFNDAELGAGTAYWLPAGATIRRIIERFVVDQEVKNGYQHVITPVM 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           ++ + ++QSGHW  Y  +M+        + D     L+PMNCP H+A++ H + SYRELP
Sbjct: 299 MNLNTYKQSGHWQHYHEDMYPPM----DMGDGEEMELRPMNCPSHIAIYKHHVHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AEFG ++R E SG+L GL RVR  T +D H F   EQ+  E  KI  LI+ +Y+DFG
Sbjct: 355 IRIAEFGMMHRYEKSGALSGLQRVREMTLNDGHTFVMLEQVQEEFSKILQLIMDMYRDFG 414

Query: 420 FEKIMVKLSTR-PEKRVG---SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R P+  V     D +W+ ++ ++K  +D +K      ++     GE AFY
Sbjct: 415 INDYSFRLSYRDPKDTVKYFPDDEMWEKSQAMLKATMDDMK------LDYVEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G +    TIQ+DF  P  F+  YV +  EK  PVMIHR V  ++ERFI
Sbjct: 469 GPKLDIQVKTALGNEETLSTIQLDFLNPENFDISYVGADGEKHRPVMIHRGVISTLERFI 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
             +IE +KG  P WL+P QA +  + +    +YA +I   L+     +  D  NE + +K
Sbjct: 529 AYLIEVYKGAFPTWLAPTQATIIPVNNEIHADYAWKIQRELQDKGFRVVVDEANEKMGWK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           IR+    KIP  I+ GD+E ++ ++ IRR+GS  T+ +   D I
Sbjct: 589 IRQSQTHKIPYQIVIGDQEQADGTVNIRRYGSKETEVIPFEDFI 632


>gi|332878705|ref|ZP_08446422.1| threonine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
 gi|332683342|gb|EGJ56222.1| threonine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
          Length = 647

 Score =  501 bits (1291), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 260/638 (40%), Positives = 389/638 (60%), Gaps = 20/638 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           IK+T PDGS+K F    T ++VA SIS  LA+  ++ A NGK  +   P+  +GS+ + T
Sbjct: 2   IKITLPDGSVKEFNSGITPAEVALSISEGLARNVLSAAFNGKTIETVTPLTTDGSLVLYT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQI 122
            E+P       HS AHI+A+A++ ++P +++ IGP I +GFYYD D   +P S  +   I
Sbjct: 62  WENPEGKKAFWHSSAHILAQALEELYPGIKLTIGPAIANGFYYDVDFNGKPISEKDFPAI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E K  EI      F  + +S  +A   +  K E YK E++E++     +T      + DL
Sbjct: 122 EAKFLEIARGKHEFKMRPVSKAEALSYYADKNE-YKTELIEAL-EDGTITFCDHSTFTDL 179

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRG H+ +TG VK   K++  AGAYWRGD + P L+R+YG ++  Q++LT+YL  LEE++
Sbjct: 180 CRGGHIPNTGFVKAV-KVLSAAGAYWRGDEHNPQLTRVYGISFPKQKDLTEYLTLLEEAK 238

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
           KRDHRKL +E++LF  +   G G+  W  KG  + + L +++R+  K+  YE++ TP + 
Sbjct: 239 KRDHRKLGKELELFTFSNKVGQGLPLWLPKGAALRERLEAFLRKAQKEAGYEQVVTPHIG 298

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            ++L+  SGHWD Y  + F       T  +   + LKPMNCP H  ++N    SY++LP 
Sbjct: 299 HKNLYVTSGHWDKYGKDSFQPIA---TPNEGEEYLLKPMNCPHHCEIYNSHPWSYKDLPK 355

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R AEFG+VYR E SG LHGL RVR FTQDDAH+FCT EQ+  E   + +L++ ++   GF
Sbjct: 356 RFAEFGTVYRYEQSGELHGLTRVRCFTQDDAHIFCTPEQLDAEFKHVIDLVLYVFGSLGF 415

Query: 421 EKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           +    ++S R    P K +G+D  W  AEN +      I  + +  +N  +  GE AFYG
Sbjct: 416 DNFTAQVSLRDPDNPTKYIGTDENWAKAENAI------INAAKEKGLNYVIETGEAAFYG 469

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK ++++KDA+GR WQ GTIQVD+NLP RF+ +Y  + +E   PVMIHRA FGS+ERF+ 
Sbjct: 470 PKLDFMVKDALGRSWQLGTIQVDYNLPERFDLWYKGADNEMHRPVMIHRAPFGSMERFVA 529

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           I++E+  GN PLWL+P QAIV +++     YAQ++  LL++  +    D R ET+  KIR
Sbjct: 530 ILLEHTAGNFPLWLNPNQAIVLSLSEKYENYAQKVLRLLENSDIRTLIDNRAETMGKKIR 589

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           E   +K+P ++I G+ E  E ++ +R+ G      +S+
Sbjct: 590 EAETQKVPYMLIVGENEEKEGTVSVRKRGGEDLGSMSV 627


>gi|218677881|ref|ZP_03525778.1| threonyl-tRNA synthetase [Rhizobium etli CIAT 894]
          Length = 340

 Score =  501 bits (1291), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 231/340 (67%), Positives = 278/340 (81%), Gaps = 6/340 (1%)

Query: 114 FSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTL 173
           F+ D+L +IEKKM+EIIAR++PF KQ  S EKA+++F +K E YKVE++++IP  +++ +
Sbjct: 1   FTPDDLPKIEKKMKEIIARNAPFTKQIWSREKAKDVFAAKGEQYKVELVDAIPEGQDLKI 60

Query: 174 YRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQ 233
           Y QGEWFDLCRGPH+ STGQV   FKLMKVAGAYWRGDSN  MLSRIYGTAW  Q +L  
Sbjct: 61  YNQGEWFDLCRGPHMASTGQVGTAFKLMKVAGAYWRGDSNNAMLSRIYGTAWADQADLDN 120

Query: 234 YLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEE 293
            L+ L E+EKRDHRKL REMDLFH  E+G GV+FWH KGW+IFQTL++YMRR++  DYEE
Sbjct: 121 DLHMLAEAEKRDHRKLGREMDLFHFQEEGPGVVFWHGKGWRIFQTLVAYMRRRLAVDYEE 180

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCA------DDTIKDLRTFALKPMNCPGHVAV 347
           +N PQVLD  LW+ SGHW  Y+ NMFAVK A      +D   D R FALKPMNCPGHV +
Sbjct: 181 VNAPQVLDTSLWETSGHWGWYQENMFAVKSAHAMTHSEDKEADNRVFALKPMNCPGHVQI 240

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
           F HGLKSYRELP+RLAEFG V+R EPSG+LHGLMRVRGFTQDDAH+FCT EQM  ECLKI
Sbjct: 241 FKHGLKSYRELPIRLAEFGLVHRYEPSGALHGLMRVRGFTQDDAHIFCTDEQMAAECLKI 300

Query: 408 HNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENI 447
           ++LI+S+Y+DFGF++I+VKLSTRPEKRVGSDALWD AE +
Sbjct: 301 NDLILSVYEDFGFKEIVVKLSTRPEKRVGSDALWDRAEAV 340


>gi|157364839|ref|YP_001471606.1| threonyl-tRNA synthetase [Thermotoga lettingae TMO]
 gi|166987326|sp|A8F8Q8|SYT_THELT RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|157315443|gb|ABV34542.1| threonyl-tRNA synthetase [Thermotoga lettingae TMO]
          Length = 638

 Score =  501 bits (1290), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 252/598 (42%), Positives = 380/598 (63%), Gaps = 21/598 (3%)

Query: 35  AKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE-- 91
           + + +A   NGK+ DL   +  +G +E +      +  V RH+ +HI+A+AV +++ +  
Sbjct: 27  SDEVIAAVFNGKLIDLRSTIDSDGEVEFVDLFHELAPEVYRHTMSHILAQAVMNVYGKKN 86

Query: 92  VQVAIGPIIEDGFYYDFD-KEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELF 150
           V++ IGP IE+GFYYDF+      + ++L++IE++M++II ++ P  +  +S + A    
Sbjct: 87  VRLGIGPAIENGFYYDFEILNGKITEEDLSRIEEEMKKIIEQNIPVERIEMSKDDAISFM 146

Query: 151 ESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRG 210
             K + YKVE+L+ I     VTL++QG++ DLCRGPH+ STG VK F KL+ V+GAYW+G
Sbjct: 147 TEKDQPYKVELLKEI-QDNKVTLFKQGDFVDLCRGPHMPSTGMVKHF-KLLSVSGAYWKG 204

Query: 211 DSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWH 269
           D   PML R+YGTA+  Q+EL  YL  LEE+ KRDHRKL   +D+F I  D  +G+  + 
Sbjct: 205 DEKNPMLQRVYGTAFLRQEELKNYLDLLEEARKRDHRKLGPALDIFFIDFDVAAGMPVFT 264

Query: 270 RKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTI 328
             G  I + L+ + R+  I+  YEE+ TP V+ + LW+ SGHW+ Y+ NM+       T 
Sbjct: 265 PNGTVILKELMEFSRQLHIEYGYEEVMTPLVMSEKLWRMSGHWEHYKENMYF------TT 318

Query: 329 KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQ 388
           K+ + FA+KPMNCPGH+ V+ +   SYR+LPVR  EFG V+R E SG LHGL RVR FTQ
Sbjct: 319 KEEQQFAIKPMNCPGHILVYKNKPVSYRDLPVRFFEFGKVHRYERSGVLHGLFRVRSFTQ 378

Query: 389 DDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIM 448
           DDAH+FC  +Q+ NE   + NL+  IY  FGF+    +LST PE  +G +A W+ A   +
Sbjct: 379 DDAHIFCRIDQVENEIAGVINLVHRIYSQFGFD-YSAELSTMPEDHMGDEATWEKATEAL 437

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
           +  ++++       +   V   EGAFYGPK ++ ++D+IGR WQC TIQ+DF +P RF  
Sbjct: 438 RKAMESVG------LQYVVKEKEGAFYGPKIDFHVRDSIGRTWQCATIQLDFLMPQRFGL 491

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYA 568
            Y +   +   PVMIHRA++GS+ERF+GI+IE++ G  P WL+P+Q I+  I     EYA
Sbjct: 492 VYTSMDGKYQQPVMIHRAIYGSLERFLGILIEHYAGAFPTWLAPVQVIIIPIADRHFEYA 551

Query: 569 QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS 626
           +++ +    + + ++ D R ET+ YKIR+    KIP +++ GD+EA   ++ +R  GS
Sbjct: 552 EKVKSEFVKNGVRVKIDARRETVGYKIRDAQSMKIPYMLVVGDREADSEAVSVRTRGS 609


>gi|15673893|ref|NP_268068.1| theronyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
 gi|281492524|ref|YP_003354504.1| threonyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
 gi|22654138|sp|Q9CED2|SYT_LACLA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|12724948|gb|AAK06009.1|AE006421_2 theronyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
 gi|281376188|gb|ADA65679.1| Threonyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
 gi|326407464|gb|ADZ64535.1| threonyl-tRNA synthetase [Lactococcus lactis subsp. lactis CV56]
          Length = 646

 Score =  501 bits (1290), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 263/644 (40%), Positives = 401/644 (62%), Gaps = 23/644 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           IK+TFPDG++K F    T  ++A+SIS SLAKK +A  +NGK+ D +  + E S  EI+T
Sbjct: 2   IKITFPDGNVKEFEAGVTTFEIAKSISPSLAKKTLAGKVNGKLIDATRAINEDSNFEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQI 122
           P+   +L ++RHS AH+ A+A +  +P++ + +GP I+DGFYYD D E    S+D+LA I
Sbjct: 62  PDHEDALGILRHSAAHLFAQAAKRHFPDIHLGVGPAIQDGFYYDTDNEAGQISNDDLATI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWFD 181
           E +M++I+  +    ++ +S E+A+E+F +  + YK+E++E     E  +T+Y QGE+ D
Sbjct: 122 EAEMKKIVKENFKSERKEVSKEEAKEIFAN--DPYKLELIEEHNEDEGGLTIYTQGEYTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG V KFF L+ VAGAYWRG+S+  M+ RIYGTAW T++EL + L   EE+
Sbjct: 180 LCRGPHVPSTG-VIKFFHLLNVAGAYWRGNSDNKMMQRIYGTAWFTKEELEENLKLREEA 238

Query: 242 EKRDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL RE+DLF + AE G+G  +W   G  I + +  ++  +++K+ Y+ + TP +
Sbjct: 239 KERDHRKLGRELDLFFNDAELGAGTAYWLPAGATIRRIIERFVVDQEVKNGYQHVITPVM 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           ++ + ++QSGHW  Y  +M+        + D     L+PMNCP H+A++ H + SYRELP
Sbjct: 299 MNLNTYKQSGHWQHYHEDMYPPM----DMGDGEEMELRPMNCPSHIAIYKHHVHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AEFG ++R E SG+L GL RVR  T +D H F   EQ+  E  KI  LI+ +Y+DFG
Sbjct: 355 IRIAEFGMMHRYEKSGALSGLQRVREMTLNDGHTFVMLEQVQEEFSKILQLIMDMYRDFG 414

Query: 420 FEKIMVKLSTRPEKRV----GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R  K        D +W+ ++ ++K  +D +   + D +      GE AFY
Sbjct: 415 INDYSFRLSYRDPKDTVKYFPDDEMWEKSQAMLKATMDDM---NLDYVEAE---GEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G +    TIQ+DF  P  F+  Y+ +  EK  PVMIHR V  ++ERFI
Sbjct: 469 GPKLDIQVKTALGNEETLSTIQLDFLNPENFDISYIGADGEKHRPVMIHRGVISTLERFI 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
             +IE +KG  P WL+P QA +  + +    +YA +I   L+     +  D  NE + +K
Sbjct: 529 AYLIEVYKGAFPTWLAPTQATIIPVNNEIHADYAWKIQRELQDKGFRVVVDEANEKMGWK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           IR+    KIP  I+ GD+E ++ ++ IRR+GS  T+ + L + I
Sbjct: 589 IRQSQTHKIPYQIVIGDQEQADGTVNIRRYGSKETKVIPLEEFI 632


>gi|314936214|ref|ZP_07843561.1| threonine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
 gi|313654833|gb|EFS18578.1| threonine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
          Length = 645

 Score =  501 bits (1289), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 262/636 (41%), Positives = 403/636 (63%), Gaps = 21/636 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           I + FPDG+ K+F    T  D+A+SIS  L KKAVA   N ++ DL+ P+ E G+IEI+T
Sbjct: 4   INIKFPDGNSKSFDKGTTTEDIAQSISPGLRKKAVAGKFNNQLVDLTRPLEEDGAIEIVT 63

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P    +L V+RHS AH+MA+A++ I+ +V+  +GP+IE GFYYDFD ++  SSD+  +IE
Sbjct: 64  PGSDEALEVLRHSTAHLMAQALKRIYGDVKFGVGPVIEGGFYYDFDMDEKVSSDDFEKIE 123

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K M++I+  +    ++ +S E+A++ F  K + YK+E++++IP  ENVTLY QGE+ DLC
Sbjct: 124 KTMKQIVNENYKIERKVVSREEAKDFF--KDDPYKLELIDAIPEDENVTLYTQGEFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RG HV ST ++K+F KL+  AGAYWRGDS+  ML RIYGTA+  +++L  +L  LEE  +
Sbjct: 182 RGVHVPSTSKIKEF-KLLSTAGAYWRGDSDNKMLQRIYGTAFFDKKDLKAHLDMLEERRE 240

Query: 244 RDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLD 301
           RDHR++ ++++LF   +  G+G+  W   G  I + +  Y+  +++   Y+ + TP + +
Sbjct: 241 RDHRRIGKDLELFTNNQLVGAGLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLAN 300

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             L++ SGHWD YR +MF     D+T        L+PMNCP H+ V+N+   SYRELP+R
Sbjct: 301 VELYKTSGHWDHYRDDMFPPMKLDET----EEMVLRPMNCPHHMMVYNNKPHSYRELPIR 356

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AE G+++R E SG++ GL RVRG T +D+H+F   +Q+ +E  ++ ++I  +Y+DFGFE
Sbjct: 357 IAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKDEFKRVVHMIQDVYEDFGFE 416

Query: 422 KIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
               +LS R     EK +  D +W+ AE+++K  +D +     + I      GE AFYGP
Sbjct: 417 DYTFRLSYRDPEDKEKYMDDDDMWNKAESMLKEAVDEMGLPYVEAI------GEAAFYGP 470

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  +K A+G++    T Q+DF LP RF+  Y+ S  E   PV+IHR V  ++ERF+  
Sbjct: 471 KLDVQVKTAMGKEETLSTAQLDFLLPERFDLSYIGSDGENHRPVVIHRGVVSTMERFVAF 530

Query: 538 MIENFKGNLPLWLSPIQA-IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           + E  KG  P WL+P Q  I+        +YA+ + + LKS  + +E D RNE + YKIR
Sbjct: 531 LTEETKGAFPTWLAPKQVEIIPVNVDLHYDYARNLQDELKSQGVRVEIDDRNEKMGYKIR 590

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
           E  ++KIP  I+ GDKE     + +R++GS   + +
Sbjct: 591 EAQMQKIPYQIVVGDKEVENNEVNVRKYGSQDQETI 626


>gi|298384716|ref|ZP_06994276.1| threonine--tRNA ligase [Bacteroides sp. 1_1_14]
 gi|298262995|gb|EFI05859.1| threonine--tRNA ligase [Bacteroides sp. 1_1_14]
          Length = 646

 Score =  501 bits (1289), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 261/648 (40%), Positives = 392/648 (60%), Gaps = 19/648 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIEIITP 64
           IK+TFPDGS++ +     G  +AESIS  LA+  +A  +NG+  DL  P+ E +  ++  
Sbjct: 2   IKITFPDGSVREYNEGVNGLQIAESISSRLAQDVLACGVNGETYDLGRPINEDADFVLYK 61

Query: 65  -EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
            +D        H+ AH++AEA+Q ++P +Q  IGP IE+GFYYD D  E      +L  I
Sbjct: 62  WDDEEGKHAFWHTSAHLLAEALQELYPGIQFGIGPAIENGFYYDVDPGEAVIKESDLPVI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E KM E+ A+    +++ +S   A ++F  + E YK E++  +    ++T Y QG + DL
Sbjct: 122 EAKMLELSAKKEAVVRESISKTDALKMFGDRGETYKCELISEL-EDGHITTYTQGAFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ +T  +K   KL  VAGAYWRG  +R ML+RIYG  +  ++ L +YL  LEE++
Sbjct: 181 CRGPHLMTTAPIKAI-KLTTVAGAYWRGHEDRKMLTRIYGITFPKKKMLDEYLVLLEEAK 239

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           KRDHRK+ +EM LF  +E  G G+  W  KG  +   L  ++RR + + DY+E+ TP + 
Sbjct: 240 KRDHRKIGKEMQLFMFSETVGKGLPMWLPKGTALRLRLQEFLRRIQTRYDYQEVITPPIG 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ L+  SGH+  Y  + F       T ++   + LKPMNCP H  ++ +  +SY++LP+
Sbjct: 300 NKLLYVTSGHYAKYGKDAFQ---PIHTPEEGEEYFLKPMNCPHHCEIYKNFPRSYKDLPL 356

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AEFG+V R E SG LHGL RVR FTQDDAH+FC  +Q+ +E L++ ++I  +++   F
Sbjct: 357 RIAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKDEFLRVMDIISIVFRSMNF 416

Query: 421 EKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           +    ++S R     EK +GSD  W+ AE  +      I+   +  +   +  GE AFYG
Sbjct: 417 QNFEAQISLRDKVNREKYIGSDDNWEKAEQAI------IEACEEKGLPAKIEYGEAAFYG 470

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK ++++KDAIGR WQ GTIQVD+NLP RF   Y+ S ++K  PVMIHRA FGS+ERF+ 
Sbjct: 471 PKLDFMVKDAIGRRWQLGTIQVDYNLPERFELEYMGSDNQKHRPVMIHRAPFGSMERFVA 530

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           ++IE+  G  PLWL+P Q  +  I+    EYA+++   LK H +    D RNE I  KIR
Sbjct: 531 VLIEHTAGKFPLWLTPDQVAILPISEKFNEYAEQVKMYLKMHEIRAIVDDRNEKIGRKIR 590

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           ++ +K+IP ++I G+KEA    + +RR G      +   +   IL +E
Sbjct: 591 DNEMKRIPYMLIVGEKEAENGEVSVRRQGEGDKGTMKYEEFAKILNEE 638


>gi|86143057|ref|ZP_01061479.1| threonyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217]
 gi|85830502|gb|EAQ48961.1| threonyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217]
          Length = 648

 Score =  501 bits (1289), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 268/648 (41%), Positives = 396/648 (61%), Gaps = 19/648 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           I++T PDGS+K F    T  DVA SIS  LA+  ++   N K  +++ P+ E G++ + T
Sbjct: 2   IQVTLPDGSVKEFESGTTPFDVANSISAGLARNVISAKYNNKTIEITTPLTEDGALVLFT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQI 122
             D        HS AHI+A+A++ ++P V++ IGP I+ GFYYD D  ++  S ++  +I
Sbjct: 62  WNDDEGKKAFWHSSAHILAQALEELYPGVKLTIGPAIDKGFYYDVDLGDRSLSENDFKKI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E KM EI      F  + +S   A E+++ +   YKVE++E++     +T      + DL
Sbjct: 122 ENKMLEIARGKHEFSMRSVSKADALEMYKKQDNPYKVELIENL-EDGTITFCDHDTFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRG H+ +TG VK   KLM VAGAYWRGD N+P L+R+YG ++  Q++L +YL  LEE++
Sbjct: 181 CRGGHLPNTGFVKAV-KLMSVAGAYWRGDENKPQLTRVYGISFPKQKDLKEYLELLEEAK 239

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           KRDHRKL +E+ LF  ++  G G+  W  KG  + + L ++++  + K  YE + +P + 
Sbjct: 240 KRDHRKLGKELQLFTFSQKVGQGLPLWLPKGAALRERLENFLKAAQKKAGYEMVVSPHIG 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            + L+  SGH+  Y  + F       T  +   F LKPMNCP H  +FN    SYR+LP 
Sbjct: 300 QKELYVTSGHYAKYGEDSFQPIT---TPAEGEEFLLKPMNCPHHCEIFNATQWSYRDLPK 356

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R AEFG+VYR E SG LHGL RVRGFTQDDAH+FCT +Q+ +E +K+ +L++ ++   GF
Sbjct: 357 RFAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCTPDQLDDEFMKVIDLVLYVFGSLGF 416

Query: 421 EKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           E    ++S R     EK +G+D  W  AEN +      I  +    +N  V  GE AFYG
Sbjct: 417 ENFTAQVSLRDPENKEKYIGTDENWAKAENAI------INAAKAKGLNYVVETGEAAFYG 470

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK ++++KDA+GR WQ GTIQVD+NLP RF   Y  S +E+  PVMIHRA FGS+ERF+ 
Sbjct: 471 PKLDFMVKDALGRSWQLGTIQVDYNLPERFELAYKGSDNEEHRPVMIHRAPFGSMERFVA 530

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           I++E+  GN PLWL P QA V T++ +   YAQ +  LL++H +    D R ET+  KIR
Sbjct: 531 ILLEHTGGNFPLWLMPEQATVLTLSENYENYAQNVLTLLENHDVRATIDDRGETMGRKIR 590

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           E  ++K P ++I G+KEA++ ++ +R+ G      +++ D   I+  E
Sbjct: 591 EAEMQKTPYMLIIGEKEANDGTVSVRKHGGEDLGTMTVADFAKIIEAE 638


>gi|302533417|ref|ZP_07285759.1| threonyl-tRNA synthetase [Streptomyces sp. C]
 gi|302442312|gb|EFL14128.1| threonyl-tRNA synthetase [Streptomyces sp. C]
          Length = 658

 Score =  501 bits (1289), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 275/668 (41%), Positives = 395/668 (59%), Gaps = 46/668 (6%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           SD+++     S ++  V ATG+  AE  +    +  VA  I G++ DLS  V++G ++E 
Sbjct: 2   SDVRVIIQRDSERDERVVATGTTAAELFAGE--RTIVAARIAGELKDLSYEVKDGETVEP 59

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +       L ++RHS AH+MA+AVQ ++PE ++ IGP + DGFYYDFD  +PF+ D+L  
Sbjct: 60  VEISSEDGLNILRHSTAHVMAQAVQELFPEAKLGIGPPVRDGFYYDFDVAKPFTPDDLKT 119

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-----ESIPAKENV----- 171
           IEKKMQEI  R   F ++ +S E ARE  E   E YK+E++      S     NV     
Sbjct: 120 IEKKMQEIQKRGQKFARRVVSDEAARE--ELADEPYKLELIGIKGSASTDDGANVEVGGG 177

Query: 172 --TLY-----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYG 222
             T+Y     + GE  W DLCRGPH+ +T  +  F KLM+ A AYWRG    PML RIYG
Sbjct: 178 ELTIYDNLDAKTGELCWKDLCRGPHLPTTRNIPAF-KLMRNAAAYWRGSEKNPMLQRIYG 236

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLIS 281
           TAW +++EL  +L FL E+EKRDHRKL  E+DLF I ++ GSG+  +H +G  I + +  
Sbjct: 237 TAWPSKEELKAHLDFLAEAEKRDHRKLGNELDLFSIPDEIGSGLAVFHPRGGIIRRVMED 296

Query: 282 YMRRKIKDD-YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
           Y RR+ +++ YE + +P      L+++SGH D Y   M+     D        + LKPMN
Sbjct: 297 YSRRRHEEEGYEFVYSPHATKGALFEKSGHLDWYAEGMYPPMQLDGGTD----YYLKPMN 352

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
           CP H  +F+   +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDDAH++CT+EQM
Sbjct: 353 CPMHNLIFDARGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYCTREQM 412

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTR-PEKRVGSDALWDDAENIMKGVLDTIKNSS 459
             E  +    ++++ +D+G     ++LST+ PEK VGSD +W++A  +++ V +      
Sbjct: 413 AEELDRTLTFVLNLLRDYGLTDFYLELSTKDPEKFVGSDEVWEEATAVLQQVAE------ 466

Query: 460 QDRINTGVLL----GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS 515
                 G+ L    G  AFYGPK     +DAIGR WQ  T+Q+DFNLP RF+  Y     
Sbjct: 467 ----KQGLPLTPDPGGAAFYGPKISVQARDAIGRTWQMSTVQLDFNLPERFDLEYTGPDG 522

Query: 516 EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLL 575
            +  PVMIHRA+FGSIERF  +++E++ G +P WL+P+QA+   I    VEY QE A   
Sbjct: 523 SRQRPVMIHRALFGSIERFFAVLLEHYAGAMPPWLAPVQAVGIPIGDGHVEYLQEFAAAA 582

Query: 576 KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
           K   L +E D  ++ +  KIR H   K+P +II GD++ +  ++  R    +    +   
Sbjct: 583 KKQGLRVEVDASSDRMQKKIRNHQKLKVPFMIIVGDEDMAAGTVSFRYRDGSQENGIPKD 642

Query: 636 DAIPILTK 643
           +A+  L K
Sbjct: 643 EALAKLAK 650


>gi|116075451|ref|ZP_01472711.1| threonyl-tRNA synthetase [Synechococcus sp. RS9916]
 gi|116067648|gb|EAU73402.1| threonyl-tRNA synthetase [Synechococcus sp. RS9916]
          Length = 609

 Score =  500 bits (1288), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 262/589 (44%), Positives = 359/589 (60%), Gaps = 26/589 (4%)

Query: 47  VCDLSDPVREGSIEIITPED----PRS-----LAVIRHSCAHIMAEAVQSIWPEVQVAIG 97
             D+ +PV   ++    P +    P++     L  IRHS +H+MA AVQ ++P+ QV IG
Sbjct: 2   AVDVLEPVSSAAVTAPAPTETVVLPKTSESDTLLRIRHSMSHVMAMAVQKLFPKAQVTIG 61

Query: 98  PIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAY 157
           P  E GFYYDFD   PF+  +L  I K+M +II R  P  +  +S  +A    +++ E Y
Sbjct: 62  PWTESGFYYDFDSPDPFTEADLKAIRKEMIKIINRKLPLERVEVSRAEAEAKIKAQNEPY 121

Query: 158 KVEILESIPAKENVTLYRQGE-WFDLCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRP 215
           K+EIL  I  +E +TLY  GE W+DLC GPHV +T ++  K F+L  VAGAYWRGD N  
Sbjct: 122 KLEILSGI--QEPITLYTLGEEWWDLCAGPHVANTSELNAKAFELESVAGAYWRGDENNA 179

Query: 216 MLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWK 274
            L RIYGTAW T ++L ++    EE+ +RDHR++  ++DLF I  E G+G++FWH +G +
Sbjct: 180 QLQRIYGTAWETPEQLAEHKRRKEEALRRDHRRIGTDLDLFSIEDEAGAGLVFWHPRGAR 239

Query: 275 IFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           +   +  + R+   +  YE + TP V D  LW+ SGH D Y  +MF     D+     R 
Sbjct: 240 MRLLIEDFWRQAHFEGGYELLYTPHVADISLWKTSGHLDFYSESMFGPMVVDE-----RE 294

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
           + LKPMNCP HV  +   L+SYRELP+R AE G+VYR E  G +HGLMRVRGFTQDDAHV
Sbjct: 295 YQLKPMNCPFHVLTYASTLRSYRELPIRWAELGTVYRYERPGVMHGLMRVRGFTQDDAHV 354

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
           FC  EQ+ +E L+I +L   I   F F+   + LSTRPEK +G DA+WD A    KG+++
Sbjct: 355 FCLPEQISDEILRILDLTERILSTFDFKNYEINLSTRPEKSIGDDAVWDLA---TKGLIE 411

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS 513
            ++    D     V  G GAFYGPK +  ++DAIGR WQC TIQ+DFNLP RF   YV +
Sbjct: 412 ALERKGWD---YKVDEGGGAFYGPKIDLKIEDAIGRMWQCSTIQLDFNLPERFKLDYVAA 468

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIAN 573
            S K  P+MIHRA+FGS+ERF GIM EN+ G+ P WL+P Q  +  +T     YA+ + +
Sbjct: 469 DSSKQRPIMIHRAIFGSLERFFGIMTENYAGDFPFWLAPEQIRLLPVTDEVQSYAESLCD 528

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
            LK+  +    D   E +   IR     KIP++ + G KEA + S  +R
Sbjct: 529 QLKAAGVRASVDRSGERLGKLIRTGEKMKIPVLAVIGAKEAEQASASLR 577


>gi|116512847|ref|YP_811754.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Lactococcus
           lactis subsp. cremoris SK11]
 gi|122939966|sp|Q02WN1|SYT_LACLS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|116108501|gb|ABJ73641.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Lactococcus
           lactis subsp. cremoris SK11]
          Length = 646

 Score =  500 bits (1288), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 265/644 (41%), Positives = 399/644 (61%), Gaps = 23/644 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           IK+TFPDG+IK F    T  ++A+SIS SLAKK +A  +NGK+ D +  + E S  EI+T
Sbjct: 2   IKITFPDGNIKEFESGVTTFEIAKSISPSLAKKTLAGKVNGKLIDATRAINEDSDFEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQI 122
           P+   +L ++RHS AH+ A+A +  +P + + +GP I+DGFYYD D E    S+D+LA I
Sbjct: 62  PDHEDALGILRHSAAHLFAQAAKRHFPNIHLGVGPAIQDGFYYDTDNEAGQISNDDLATI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWFD 181
           E +M++I+  +    ++ +S E+A+E+F +  + YK+E++E     E  +T+Y QGE+ D
Sbjct: 122 EAEMKKIVKENFKSERKEVSKEEAKEIFAN--DPYKLELIEEHNEDEGGLTIYTQGEYTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG V KFF L+ VAGAYWRG+S+  M+ RIYGTAW +++EL   L   EE+
Sbjct: 180 LCRGPHVSSTG-VIKFFHLLNVAGAYWRGNSDNKMMQRIYGTAWFSKEELEANLKLREEA 238

Query: 242 EKRDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL RE+DLF + AE G+G  +W   G  I + +  ++  +++K+ Y+ + TP +
Sbjct: 239 KERDHRKLGRELDLFFNDAELGAGTAYWLPAGATIRRIIERFVVDQEVKNGYQHVITPVM 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           ++ + ++QSGHW  Y  +M+        + D     L+PMNCP H+A++ H + SYRELP
Sbjct: 299 MNLNTYKQSGHWQHYHEDMYPPM----DMGDGEEMELRPMNCPSHIAIYKHHVHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AEFG ++R E SG+L GL RVR  T +D H F   EQ+  E  KI  LI+ +Y+DFG
Sbjct: 355 IRIAEFGMMHRYEKSGALSGLQRVREMTLNDGHTFVMLEQVQEEFSKILQLIMDMYRDFG 414

Query: 420 FEKIMVKLSTR-PEKRVG---SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R P+  V     D +W+ ++ ++K  +D +K      ++     GE AFY
Sbjct: 415 INDYSFRLSYRDPKDTVKYFPDDEMWEKSQAMLKATMDDMK------LDYVEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G +    TIQ+DF  P  F+  YV +  EK  PVMIHR V  ++ERFI
Sbjct: 469 GPKLDIQVKTALGNEETLSTIQLDFLNPENFDISYVGADGEKHRPVMIHRGVISTLERFI 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
             +IE +KG  P WL+P QA +  + +    +YA +I   L+     +  D  NE + +K
Sbjct: 529 AYLIEVYKGAFPTWLAPTQATIIPVNNEIHADYAWKIQRELQDKGFRVVVDEANEKMGWK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           IR+    KIP  I+ GD+E +  ++ IRR+GS  T+ +   D I
Sbjct: 589 IRQSQTHKIPYQIVIGDQEQANGTVNIRRYGSKETEVIPFEDFI 632


>gi|223997660|ref|XP_002288503.1| threonyl-trna synthetase [Thalassiosira pseudonana CCMP1335]
 gi|220975611|gb|EED93939.1| threonyl-trna synthetase [Thalassiosira pseudonana CCMP1335]
          Length = 592

 Score =  500 bits (1287), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 261/567 (46%), Positives = 349/567 (61%), Gaps = 45/567 (7%)

Query: 81  MAEAVQSIWPEVQVAIGPIIEDGFYYDF------DKE-------QPFSSDELAQIEKKMQ 127
           MA AVQ  +PE QV IGP I++GFYYDF      D E       +  S  +L  I+K M 
Sbjct: 1   MAMAVQQTFPEAQVTIGPWIDNGFYYDFYFPETTDAETGEAIPSRKLSDQDLKAIKKAMD 60

Query: 128 EIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG-EWFDLCRGP 186
           +II  D P +++ +S E+A++  ES  E +K+EIL+SI   E +T+Y  G EW+DLC GP
Sbjct: 61  KIIGADYPIIREEVSREEAKKRIESINEPFKLEILDSIKT-EPITIYSIGDEWWDLCAGP 119

Query: 187 HVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           HV STGQ+ KK   L  VAGAYWRGD  R ML RIY TAW   ++L  Y   +EE++KRD
Sbjct: 120 HVESTGQLPKKAIALQSVAGAYWRGDEKREMLQRIYATAWKDPKQLKLYKKRMEEAKKRD 179

Query: 246 HRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD---------DYEEIN 295
           HR L +++DLF I ED G G++FWH KG        S +RRKI+D         DY+ + 
Sbjct: 180 HRVLGKKLDLFSIQEDAGGGLVFWHPKG--------STVRRKIEDFWKEAHIAQDYDIVY 231

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP + +  LW+ SGH+D YR  MF     D    +   + +KPMNCP H  +F   ++SY
Sbjct: 232 TPHIANLDLWKTSGHYDFYREGMF-----DQMDVENEVYQIKPMNCPFHCLMFKDSIRSY 286

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           R+LP R  E G+VYR E SG+LHGLMRVRGFTQDDAH+FC  EQ+ +E + +  L   I 
Sbjct: 287 RDLPFRWGELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQLQSEIVDVLKLTKDIL 346

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
             FGF K  + +STRPEK VGSD +WDDA   + G LD +          G   G GAFY
Sbjct: 347 SRFGFNKYELMVSTRPEKSVGSDQIWDDATKALVGALDELG------WEYGTDEGGGAFY 400

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +KDAIGR WQC T+Q DFNLP RF+  YV++  +K  P+M+HRA+FGSIERF 
Sbjct: 401 GPKIDLKIKDAIGRTWQCSTVQCDFNLPERFDLEYVSAEGKKERPIMVHRAIFGSIERFF 460

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
           GI++EN  G+LP WL+P Q  +  +T + V+Y +E+A       L +E D   E +  +I
Sbjct: 461 GILVENTAGDLPFWLAPTQLKLLPVTDAVVDYCKEVAKKANKMGLRVEVDRGAERLAKQI 520

Query: 596 REHSIKKIPIIIICGDKEASERSIGIR 622
           R     +IP++ + G KE  E ++ +R
Sbjct: 521 RNAEQSRIPVMAVVGMKEMEEGTLALR 547


>gi|312132188|ref|YP_003999528.1| ser-tRNA(thr) hydrolase; threonyl-tRNA synthetase [Leadbetterella
           byssophila DSM 17132]
 gi|311908734|gb|ADQ19175.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Leadbetterella
           byssophila DSM 17132]
          Length = 650

 Score =  500 bits (1287), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 268/650 (41%), Positives = 405/650 (62%), Gaps = 21/650 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEII 62
           +IK+T PDGSI+ F    T   VA SIS  LA+  +A  +NGKV D + P+ E  ++ ++
Sbjct: 2   EIKVTLPDGSIREFEQGTTPYQVALSISEGLARNVLAAKVNGKVVDANTPLTEDVTLSLL 61

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQ 121
           T  D    +   HS AH+MAEA+++++P V+  +GP +E+GFYYD D   +P SSD+  +
Sbjct: 62  TWNDAEGKSTFWHSSAHLMAEALEALYPGVKFWVGPPVENGFYYDVDTNGKPISSDDFKK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE KM E+  + + +++  +S   A + FE K + YK+++LE +   + +TLYRQG + D
Sbjct: 122 IEDKMLELARQKNEYVRIPISKADALKYFEEKGDEYKLDLLEGLEDGQ-ITLYRQGNFTD 180

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ +TG +K    +   A AY++GD N  ML+R+YG  +   +EL +YL+ LEE+
Sbjct: 181 LCRGPHIPNTGFIKAAKIMNAAA-AYFKGDQNNKMLTRVYGVTFPKAKELEEYLHLLEEA 239

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           ++RDHRKL  E+++F  +E  G G+  W  KG  + + L ++++R +++  Y  + TP +
Sbjct: 240 KRRDHRKLGAELEIFTFSEKVGKGLPLWLPKGAMLRERLENFLKRAQLRSGYLPVVTPHI 299

Query: 300 LDQHLWQQSGHWDSYRANMF-AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
             + L+  SGHWD Y  + F  +K  ++       F LKPMNCP H  +F    +SYR+L
Sbjct: 300 GSKQLYVTSGHWDKYGEDSFQPIKTPEEG----EEFMLKPMNCPHHCEIFKSKPRSYRDL 355

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFG+VYR E SG LHGL RVRGFTQDDAH+FC  +Q+ +E  K+ +L++ ++K  
Sbjct: 356 PLRLAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCANDQVEDEFKKVIDLVLYVFKSL 415

Query: 419 GFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           GF+    ++S R      K +GSD  WD AE  +      +  +++  + T V  GE AF
Sbjct: 416 GFDDYSAQVSLRSLENRSKYIGSDEDWDKAEKAI------VNAAAEKGLKTVVEYGEAAF 469

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK ++++KDA+GR WQ GTIQVD+NLP RF+  YV S ++K  PVMIHRA FGS+ERF
Sbjct: 470 YGPKLDFMVKDALGRKWQLGTIQVDYNLPKRFDLEYVGSDNQKHRPVMIHRAPFGSMERF 529

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
           I I++EN  GN P WLSP Q  V  I+    ++A E+  +L+ + +    D R E I+ K
Sbjct: 530 IAILLENTAGNFPFWLSPEQIAVLPISEKYEDFANEVFLILQENDIRGYIDHRAEKISRK 589

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IR+  + K+P+++I G+KE  E  + +R+ G       S+ + I     E
Sbjct: 590 IRDAEVAKVPLMLIVGEKEQEEGRVSVRKKGEGDLGSFSVQEFIEFAKNE 639


>gi|254391301|ref|ZP_05006505.1| threonyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|326440214|ref|ZP_08214948.1| threonyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|197704992|gb|EDY50804.1| threonyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
          Length = 658

 Score =  500 bits (1287), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 270/652 (41%), Positives = 393/652 (60%), Gaps = 47/652 (7%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           SD+++     S +   V  TG+  A+  +    +  VA  + G++ DL+  VR+G  +E 
Sbjct: 2   SDVRVIIQRDSEREERVVTTGTTAADLFAGE--RSVVAARVAGELKDLAYTVRDGEQVEP 59

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +       LA++RHS AH+MA+AVQ ++PE ++ IGP ++DGFYYDFD E+PF+ ++L  
Sbjct: 60  VEISSEDGLAILRHSTAHVMAQAVQELFPEAKLGIGPPVKDGFYYDFDVEKPFTPEDLKA 119

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEI--LESIPAKEN--------- 170
           IEKKMQEI  R   F ++ +  ++ARE  E   E YK+E+  L+   + E+         
Sbjct: 120 IEKKMQEIQKRGQRFSRRVVGDDEARE--ELADEPYKLELIGLKGSASSEDGAAVEVGAG 177

Query: 171 -VTLY-----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYG 222
            +T+Y     + GE  W DLCRGPH+ ST  +  F KLM+ A AYWRG    PML RIYG
Sbjct: 178 ELTIYDNLDAKTGELCWKDLCRGPHLPSTRNIPAF-KLMRNAAAYWRGSEKNPMLQRIYG 236

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLIS 281
           TAW T+ EL QYL FL E+EKRDHR+L  E+DLF + ++ GSG+  +H +G  + + +  
Sbjct: 237 TAWPTKDELKQYLEFLAEAEKRDHRRLGSELDLFSVPDEIGSGLAVFHPRGGIVRRVMED 296

Query: 282 YMRRKIKDD-YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
           Y R++ +++ YE + TP      L+++SGH D Y   M+     D        + LKPMN
Sbjct: 297 YSRKRHEEEGYEFVYTPHATKGTLFEKSGHLDWYAEGMYPPMQLDGGTD----YYLKPMN 352

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
           CP H  +F+   +SYRELP+RL EFG+VYR+E SG +HGL R RGFTQDDAH++CT+EQM
Sbjct: 353 CPMHNLIFDARGRSYRELPLRLFEFGTVYRHEKSGVVHGLTRARGFTQDDAHIYCTREQM 412

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTR-PEKRVGSDALWDDAENIMKGVLDTIKNSS 459
             E  +    ++++ +D+G     ++LST+ PEK VGSD  W++A  +++ V +      
Sbjct: 413 AEELDRTLTFVLNLLRDYGLTDFYLELSTKDPEKYVGSDETWEEATEVLRRVAE------ 466

Query: 460 QDRINTGVLL----GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS 515
                 G+ L    G  AFYGPK     +DAIGR WQ  TIQ+DFNLP RFN  Y     
Sbjct: 467 ----KQGLPLTPDPGGAAFYGPKISVQARDAIGRTWQMSTIQLDFNLPERFNLEYTAPDG 522

Query: 516 EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLL 575
            +  PVMIHRA+FGSIERF  +++E++ G +P WL+P+QA+   I  + +EY Q  A   
Sbjct: 523 SRQRPVMIHRALFGSIERFFAVLLEHYAGAMPPWLAPVQAVGIPIGDAHIEYLQSFAAEA 582

Query: 576 KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR-RFGS 626
           K   L ++ D  ++ +  KIR H   K+P +II GD++ +  ++  R R GS
Sbjct: 583 KKRGLRVDVDASSDRMQKKIRNHQKLKVPFMIIVGDEDMNAGTVSFRYRDGS 634


>gi|294811598|ref|ZP_06770241.1| Threonyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|294324197|gb|EFG05840.1| Threonyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
          Length = 719

 Score =  500 bits (1287), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 270/652 (41%), Positives = 393/652 (60%), Gaps = 47/652 (7%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           SD+++     S +   V  TG+  A+  +    +  VA  + G++ DL+  VR+G  +E 
Sbjct: 63  SDVRVIIQRDSEREERVVTTGTTAADLFAGE--RSVVAARVAGELKDLAYTVRDGEQVEP 120

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +       LA++RHS AH+MA+AVQ ++PE ++ IGP ++DGFYYDFD E+PF+ ++L  
Sbjct: 121 VEISSEDGLAILRHSTAHVMAQAVQELFPEAKLGIGPPVKDGFYYDFDVEKPFTPEDLKA 180

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEI--LESIPAKEN--------- 170
           IEKKMQEI  R   F ++ +  ++ARE  E   E YK+E+  L+   + E+         
Sbjct: 181 IEKKMQEIQKRGQRFSRRVVGDDEARE--ELADEPYKLELIGLKGSASSEDGAAVEVGAG 238

Query: 171 -VTLY-----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYG 222
            +T+Y     + GE  W DLCRGPH+ ST  +  F KLM+ A AYWRG    PML RIYG
Sbjct: 239 ELTIYDNLDAKTGELCWKDLCRGPHLPSTRNIPAF-KLMRNAAAYWRGSEKNPMLQRIYG 297

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLIS 281
           TAW T+ EL QYL FL E+EKRDHR+L  E+DLF + ++ GSG+  +H +G  + + +  
Sbjct: 298 TAWPTKDELKQYLEFLAEAEKRDHRRLGSELDLFSVPDEIGSGLAVFHPRGGIVRRVMED 357

Query: 282 YMRRKIKDD-YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
           Y R++ +++ YE + TP      L+++SGH D Y   M+     D        + LKPMN
Sbjct: 358 YSRKRHEEEGYEFVYTPHATKGTLFEKSGHLDWYAEGMYPPMQLDGGTD----YYLKPMN 413

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
           CP H  +F+   +SYRELP+RL EFG+VYR+E SG +HGL R RGFTQDDAH++CT+EQM
Sbjct: 414 CPMHNLIFDARGRSYRELPLRLFEFGTVYRHEKSGVVHGLTRARGFTQDDAHIYCTREQM 473

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTR-PEKRVGSDALWDDAENIMKGVLDTIKNSS 459
             E  +    ++++ +D+G     ++LST+ PEK VGSD  W++A  +++ V +      
Sbjct: 474 AEELDRTLTFVLNLLRDYGLTDFYLELSTKDPEKYVGSDETWEEATEVLRRVAE------ 527

Query: 460 QDRINTGVLL----GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS 515
                 G+ L    G  AFYGPK     +DAIGR WQ  TIQ+DFNLP RFN  Y     
Sbjct: 528 ----KQGLPLTPDPGGAAFYGPKISVQARDAIGRTWQMSTIQLDFNLPERFNLEYTAPDG 583

Query: 516 EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLL 575
            +  PVMIHRA+FGSIERF  +++E++ G +P WL+P+QA+   I  + +EY Q  A   
Sbjct: 584 SRQRPVMIHRALFGSIERFFAVLLEHYAGAMPPWLAPVQAVGIPIGDAHIEYLQSFAAEA 643

Query: 576 KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR-RFGS 626
           K   L ++ D  ++ +  KIR H   K+P +II GD++ +  ++  R R GS
Sbjct: 644 KKRGLRVDVDASSDRMQKKIRNHQKLKVPFMIIVGDEDMNAGTVSFRYRDGS 695


>gi|167752344|ref|ZP_02424471.1| hypothetical protein ALIPUT_00588 [Alistipes putredinis DSM 17216]
 gi|167660585|gb|EDS04715.1| hypothetical protein ALIPUT_00588 [Alistipes putredinis DSM 17216]
          Length = 651

 Score =  499 bits (1285), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 254/637 (39%), Positives = 390/637 (61%), Gaps = 18/637 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+TFPDG++K F    T   +AESIS  LA  ++A ++NG   DL+  + E  SI+   
Sbjct: 2   IKITFPDGNVKEFAKGTTAYQIAESISPRLAADSLAASVNGATVDLNRAIEEDASIKFYK 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +DP       H+ +H++AEA+++++P ++  IGP IE+GFYYD D   P +  +L  IE
Sbjct: 62  WDDPEGKHAFWHTSSHLLAEALEALYPGIKFGIGPAIENGFYYDVDSPVPITEADLETIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           KKM E+       ++  +S   A + F  K + YKVE++  +     ++ Y  G + DLC
Sbjct: 122 KKMIELSRNKEQLIRTEVSKADALKNFTEKGDPYKVELIRDL-EDGTISFYTNGAFTDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ +TG +K   KL  VAGAYWRG+    ML+RIYG ++  +  L +YL  +EE++K
Sbjct: 181 RGPHLPNTGLIKAI-KLTSVAGAYWRGNEKNKMLTRIYGISFPKKSMLDEYLAMMEEAKK 239

Query: 244 RDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           RDHRKL +E++LF  ++  G G+  W  KG  +   L  ++R   K+  Y+++ TP + +
Sbjct: 240 RDHRKLGKELELFCFSQRVGQGLPLWLPKGAALRDRLEQFLRGVQKEYGYQQVITPHIGN 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + L+  SGH+  Y  + F       T  +   + LKPMNCP H  ++    +SY+ELPVR
Sbjct: 300 KELYVTSGHYAKYGKDSFQ---PIHTPIEGEEYLLKPMNCPHHCEIYRSKPRSYKELPVR 356

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFG+VYR E SG LHGL RVRGFTQDDAH+F   +Q+  E  K+ ++++ I+K   F+
Sbjct: 357 LAEFGTVYRYEQSGELHGLTRVRGFTQDDAHMFVRPDQLLEEFEKVIDIVLYIFKTLKFD 416

Query: 422 KIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
               ++S R     EK +GSD  W+ AE+ +      I+ + +  +NT +  GE AFYGP
Sbjct: 417 NYTAQISLRDPNNKEKYIGSDENWEKAESAI------IQAAKEKGLNTVIEYGEAAFYGP 470

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +++++DAIGR WQ GTIQVD+NLP RF+  Y  +  +   P+MIHRA FGS+ERF+ +
Sbjct: 471 KLDFMVRDAIGRKWQLGTIQVDYNLPERFDLTYKGADDKMHRPIMIHRAPFGSMERFVAV 530

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           ++E+  G  PLWLSP Q +V  I+    +YA++++  L  + +  + D RNE I  KIR+
Sbjct: 531 LLEHTGGKFPLWLSPDQVVVLPISEKFNDYAEKVSAYLNKYDIRSQVDDRNEKIGRKIRD 590

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           + +K+IP ++I G+KE +E  + +R  G     +++L
Sbjct: 591 NELKRIPYLLIVGEKEEAEGLVSVRAQGEGDKGQMTL 627


>gi|228472826|ref|ZP_04057584.1| threonine--tRNA ligase [Capnocytophaga gingivalis ATCC 33624]
 gi|228275877|gb|EEK14643.1| threonine--tRNA ligase [Capnocytophaga gingivalis ATCC 33624]
          Length = 649

 Score =  499 bits (1285), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 264/649 (40%), Positives = 396/649 (61%), Gaps = 22/649 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           IK+T PDGS+K +    T ++VA+SIS  LA+  ++ + NGK  +   P+  +GS+ + T
Sbjct: 2   IKITLPDGSVKEYKKGITPAEVAQSISEGLARNVISASYNGKTIETVTPLETDGSLVLYT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQI 122
            + P       HS AHI+A+A++ ++P +++ IGP I +GFYYD D      +  +   I
Sbjct: 62  WDSPEGKKAFWHSSAHILAQALEELYPNIKLTIGPAIANGFYYDVDFNGNTITDKDFPAI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E KM EI      F  + +S  +A   ++ K E YK E++E++    ++T      + DL
Sbjct: 122 EAKMLEIARGKYEFKMRPVSKAEALSYYKGKNE-YKTELIEAL-EDGSITFCDHSTFTDL 179

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRG H+ +TG VK   K++ VAGAYWRG+ N P L+R+YG ++  Q++LT+YL  LEE++
Sbjct: 180 CRGGHLPNTGFVKAV-KILSVAGAYWRGNENNPQLTRVYGISFPKQKDLTEYLTLLEEAK 238

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
           KRDHRKL +E++LF  +   G G+  W  KG  + + L +++R+  K   YE++ TP + 
Sbjct: 239 KRDHRKLGKELELFTFSNKVGQGLPLWLPKGAALRERLEAFLRKAQKQAGYEQVVTPHIG 298

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            ++L+  SGHW+ Y  + F       T  +   + LKPMNCP H  ++N    SY++LP 
Sbjct: 299 HKNLYVTSGHWEKYGKDSFQPIA---TPNEGEEYLLKPMNCPHHCEIYNSHPWSYKDLPK 355

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R AEFG+VYR E SG LHGL RVR FTQDDAH+FCT EQ+  E   + +L++ ++   GF
Sbjct: 356 RFAEFGTVYRYEQSGELHGLTRVRCFTQDDAHIFCTPEQLDAEFKHVIDLVLYVFGSLGF 415

Query: 421 EKIMVKLSTR-PE---KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL-LGEGAFY 475
           +    ++S R PE   K +G+D  W  AEN        I N+++++  T V+  GE AFY
Sbjct: 416 DNFTAQVSLRDPENLSKYIGTDENWAKAEN-------AIINAAKEKNLTYVIETGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDA+GR WQ GTIQVD+NLP RF+ +Y  + +E   PVMIHRA FGS+ERF+
Sbjct: 469 GPKLDFMVKDALGRSWQLGTIQVDYNLPERFDLWYKGADNELHRPVMIHRAPFGSMERFV 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            I++E+  GNLPLWL P Q  +  I+     YA ++ANLL+   L    D RNETI  KI
Sbjct: 529 AILLEHTAGNLPLWLVPEQVNILCISEKYEGYAHKVANLLQEADLRPHVDNRNETIGKKI 588

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           RE   +K P ++I G++E    ++ +RR G      + + D I ++ +E
Sbjct: 589 REAETQKFPYMVIVGEEEEKNATLSVRRHGGEDLGSMKIADFITLIQEE 637


>gi|228475159|ref|ZP_04059885.1| threonine--tRNA ligase [Staphylococcus hominis SK119]
 gi|228270770|gb|EEK12172.1| threonine--tRNA ligase [Staphylococcus hominis SK119]
          Length = 645

 Score =  499 bits (1285), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 261/636 (41%), Positives = 403/636 (63%), Gaps = 21/636 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           I + FPDG+ K+F    T  D+A+SIS  L KKAVA   N ++ DL+ P+ E G+IEI+T
Sbjct: 4   INIKFPDGNSKSFDKGTTTDDIAQSISPGLRKKAVAGKFNNQLVDLTRPLEEDGAIEIVT 63

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P    +L V+RHS AH+MA+A++ I+ +V+  +GP+IE GFYYDFD ++  SSD+  +IE
Sbjct: 64  PGSDEALEVLRHSTAHLMAQALKRIYGDVKFGVGPVIEGGFYYDFDMDEKVSSDDFEKIE 123

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K M++I+  +    ++ +S ++A++ F  K + YK+E++++IP  ENVTLY QGE+ DLC
Sbjct: 124 KTMKQIVNENYKIERKVVSRKEAKDFF--KDDPYKLELIDAIPEDENVTLYTQGEFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RG HV ST ++K+F KL+  AGAYWRGDS+  ML RIYGTA+  +++L  +L  LEE  +
Sbjct: 182 RGVHVPSTSKIKEF-KLLSTAGAYWRGDSDNKMLQRIYGTAFFDKKDLKAHLDMLEERRE 240

Query: 244 RDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLD 301
           RDHR++ ++++LF   +  G+G+  W   G  I + +  Y+  +++   Y+ + TP + +
Sbjct: 241 RDHRRIGKDLELFTNNQLVGAGLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLAN 300

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             L++ SGHWD YR +MF     D+T        L+PMNCP H+ V+N+   SYRELP+R
Sbjct: 301 VELYKTSGHWDHYRDDMFPPMKLDET----EEMVLRPMNCPHHMMVYNNKPHSYRELPIR 356

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AE G+++R E SG++ GL RVRG T +D+H+F   +Q+ +E  ++ ++I  +Y+DFGFE
Sbjct: 357 IAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKDEFKRVVHMIQDVYEDFGFE 416

Query: 422 KIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
               +LS R     EK +  D +W+ AE+++K  +D +     + I      GE AFYGP
Sbjct: 417 DYTFRLSYRDPEDKEKYMDDDDMWNKAESMLKEAVDEMGLPYVEAI------GEAAFYGP 470

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  +K A+G++    T Q+DF LP RF+  Y+ S  E   PV+IHR V  ++ERF+  
Sbjct: 471 KLDVQVKTAMGKEETLSTAQLDFLLPERFDLSYIGSDGENHRPVVIHRGVVSTMERFVAF 530

Query: 538 MIENFKGNLPLWLSPIQA-IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           + E  KG  P WL+P Q  I+        +YA+ + + LKS  + +E D RNE + YKIR
Sbjct: 531 LTEETKGAFPTWLAPKQVEIIPVNVDLHYDYARNLQDELKSQGVRVEIDDRNEKMGYKIR 590

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
           E  ++KIP  I+ GDKE     + +R++GS   + +
Sbjct: 591 EAQMQKIPYQIVVGDKEVENNEVNVRKYGSQDQETI 626


>gi|148242044|ref|YP_001227201.1| threonyl-tRNA synthetase [Synechococcus sp. RCC307]
 gi|147850354|emb|CAK27848.1| Threonyl-tRNA synthetase [Synechococcus sp. RCC307]
          Length = 609

 Score =  499 bits (1285), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 257/565 (45%), Positives = 356/565 (63%), Gaps = 20/565 (3%)

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T E P+ L  IRHS +H+MA AVQ ++P  +V IGP  E GFYYDFD   PF+  +L  I
Sbjct: 25  TSESPQLLK-IRHSMSHVMAMAVQQLFPNARVTIGPWTETGFYYDFDNPDPFTEADLKAI 83

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE-WFD 181
           +K M +II +  P  +  +S  +A    +++ E YK+EILE +  +E +TLY  GE W+D
Sbjct: 84  KKGMIKIINQKLPLQRVEVSRAEAETRIKAQNEPYKLEILEGL--QEPITLYTLGEKWWD 141

Query: 182 LCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           LC GPHV  TGQ+  K F+L  VAGAYWRGD NR  L RIYGTA+ T ++L+++   +EE
Sbjct: 142 LCAGPHVEHTGQLNAKAFELESVAGAYWRGDENRQQLQRIYGTAFETPEQLSEHKRRIEE 201

Query: 241 SEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQ 298
           +++RDHR++  ++DLF I  E G+G++FWH +G ++   +  + R       YE + TP 
Sbjct: 202 AKRRDHRRIGTDLDLFSIEDEAGAGLVFWHPRGARMRLLIEDFWREAHFAGGYELLYTPH 261

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V D  LW+ SGH D YR +MF     D+     R + LKPMNCP HV  +   L+SY+EL
Sbjct: 262 VADIDLWKTSGHLDFYRESMFGPMTVDE-----REYQLKPMNCPFHVLTYASTLRSYKEL 316

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R AE G+VYR E  G +HGLMRVRGFTQDDAHVFC  EQ+ +E LKI +L  +I   F
Sbjct: 317 PIRWAELGTVYRYERPGVMHGLMRVRGFTQDDAHVFCLPEQISDEILKILDLTETILSTF 376

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD-RINTGVLLGEGAFYGP 477
            F    + LSTRPEK +G DA+WD A    KG+ + ++    D +I+ G     GAFYGP
Sbjct: 377 DFRNYEINLSTRPEKSIGDDAVWDLA---TKGLTEALQRKGWDYKIDEG----GGAFYGP 429

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  ++DAIGR WQC TIQ+DFNLP RF   YV +   +  P+MIHRA+FGS+ERF GI
Sbjct: 430 KIDLKIEDAIGRMWQCSTIQLDFNLPERFGLEYVAADGSRQRPIMIHRAIFGSLERFFGI 489

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           M EN+ G+ P WL+P Q  +  +T   + YA+ I + L +  +    D   E +   IR 
Sbjct: 490 MTENYAGDFPFWLAPEQIRLLPVTDEVMGYAETIQSELSAAGIRSRIDRSGERLGKLIRS 549

Query: 598 HSIKKIPIIIICGDKEASERSIGIR 622
              +KIP++ + G +EA + ++ +R
Sbjct: 550 GEQQKIPVLAVIGAQEAEQGTLSLR 574


>gi|116070824|ref|ZP_01468093.1| Threonyl-tRNA synthetase, class IIa [Synechococcus sp. BL107]
 gi|116066229|gb|EAU71986.1| Threonyl-tRNA synthetase, class IIa [Synechococcus sp. BL107]
          Length = 615

 Score =  499 bits (1284), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 262/596 (43%), Positives = 368/596 (61%), Gaps = 22/596 (3%)

Query: 61  IITPEDPRS--LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           +I P+   S  L  IRHS +H+MA AVQ ++P+ QV IGP  E GFYYDFD  +PF+ D+
Sbjct: 23  VILPKTSESAQLLKIRHSMSHVMAMAVQKLFPDAQVTIGPWTETGFYYDFDNPEPFTEDD 82

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG- 177
           L  I+K+M +II R  P  +  +S ++A +  +++ E YK+EILE +  +E +TLY  G 
Sbjct: 83  LKAIKKEMGKIIGRKLPLERIEVSRDEAEKRIKAQNEPYKLEILERL--QEPITLYTLGD 140

Query: 178 EWFDLCRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           +W+DLC GPHV +T ++  K F+L  VAGAYWRGD  +  L RIYGTAW T ++L ++  
Sbjct: 141 QWWDLCAGPHVENTKELHPKAFELESVAGAYWRGDETKAQLQRIYGTAWETPEQLAEHKR 200

Query: 237 FLEESEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEI 294
              E+ +RDHR+L +++DLF I  E G+G++FWH +G ++   +  + R+   +  YE +
Sbjct: 201 RKAEALRRDHRRLGKDLDLFSIEDEAGAGLVFWHPRGARMRLLIEDFWRQAHFEGGYELL 260

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
            TP V D  LW+ SGH D Y  +MF     D+     R + LKPMNCP HV  +   L+S
Sbjct: 261 YTPHVADISLWKTSGHLDFYAESMFGPMQVDE-----REYQLKPMNCPFHVLTYASKLRS 315

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YRELP+R AE G+VYR E  G +HGLMRVRGFTQDDAHVFC  +Q+ +E L+I +L   I
Sbjct: 316 YRELPIRWAELGTVYRYERPGVMHGLMRVRGFTQDDAHVFCLPDQISDEILRILDLTERI 375

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
              F F    + LSTRPEK +GS+A+WD A    KG+ + ++       N  +  G GAF
Sbjct: 376 LSTFDFNNYEINLSTRPEKSIGSEAVWDLA---TKGLTEALERKGW---NYKIDEGGGAF 429

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  ++DAIGR WQC TIQ+DFNLP RF   YV +   K  P+MIHRA+FGS+ERF
Sbjct: 430 YGPKIDLKIEDAIGRMWQCSTIQLDFNLPERFGLDYVAADGSKQQPIMIHRAIFGSLERF 489

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
            GIM EN+ G+ P WL+P Q  +  +T     YA+++ + LK+  +    D   + +   
Sbjct: 490 FGIMTENYAGDFPFWLAPEQIRLLPVTDDVQPYAEQLLDQLKTAGIRATIDQSGDRLGKI 549

Query: 595 IREHSIKKIPIIIICGDKEASERSIGI--RRFGSTTTQKV-SLLDAIPILTKESLP 647
           IR     KIP++ + G KEA + ++ +  RR G      V +LL+A      E  P
Sbjct: 550 IRTGEQMKIPVLAVIGAKEAEQNAVSLRSRRDGDLGVTSVDALLNAAKWANTERQP 605


>gi|255071699|ref|XP_002499524.1| predicted protein [Micromonas sp. RCC299]
 gi|226514786|gb|ACO60782.1| predicted protein [Micromonas sp. RCC299]
          Length = 613

 Score =  499 bits (1284), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 256/586 (43%), Positives = 365/586 (62%), Gaps = 20/586 (3%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           ++++T ++   L  IRH+ AHI A AVQ ++P  QV IGP I+ GFYYDFD    FS  +
Sbjct: 28  VKLLTSDESEELLKIRHTTAHICAMAVQRLFPTAQVTIGPWIDRGFYYDFDYPAGFSDKD 87

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG- 177
           L  I+K+M +II +D P  ++ +S E+AR+  E+  E YK+EIL++I   E +T+Y  G 
Sbjct: 88  LKDIKKQMIKIINKDMPLRREEVSREEARKRIEALNEPYKLEILDAIKT-EPITIYHIGD 146

Query: 178 EWFDLCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           EW+DLC GPHV ST  +  K   L  VAGAYWRGD  RPML RIYGTAW+T +EL  Y  
Sbjct: 147 EWWDLCAGPHVESTKAIHPKAIDLESVAGAYWRGDEKRPMLQRIYGTAWSTPEELKAYND 206

Query: 237 FLEESEKRDHRKLAREMDLFHIAED--GSGVIFWHRKGWKIFQTLISYMRRKI--KDDYE 292
           F  E+ +RDHRK+ ++++LF I ++  G G++FWH KG  + + +I    + I  +  Y+
Sbjct: 207 FKAEAARRDHRKVGKDLNLFSIQQEDVGGGLVFWHPKG-ALMRDMIERFWKDIHLERGYD 265

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
            + TP V    LW+ SGH D Y  NM+     +D      T+ LKPMNCP HVAV+  G 
Sbjct: 266 LLYTPHVGKLDLWKTSGHADFYSENMYRPIDVED-----ETYQLKPMNCPFHVAVYKDGY 320

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
            SYR+LP+R AE G+VYR E SG++HGL RVRGFTQDDAH+FC  +Q+ +E   + +L  
Sbjct: 321 FSYRDLPIRWAEMGTVYRYERSGTMHGLFRVRGFTQDDAHIFCLPDQIADEIKGVLDLTE 380

Query: 413 SIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
            I   FGF++  V LST+PEK VG   +WD AE  +K  L      +Q   +  V  G G
Sbjct: 381 DILSTFGFKEFEVNLSTQPEKSVGGPEIWDKAEGALKDAL------AQKGWDYEVDEGGG 434

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           AFYGPK +  + DAIGR WQC T+Q+DFNLP RF+  Y++  + K  P+MIHRA+FGS+E
Sbjct: 435 AFYGPKIDIKILDAIGRKWQCSTVQLDFNLPERFDLAYIDKENVKQRPIMIHRAIFGSLE 494

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
           RF GI+ EN+ G  PLW++P Q  +  +T +  +Y QE A  L++  +  +     E + 
Sbjct: 495 RFFGILTENYAGAFPLWIAPTQVRLLPVTDAVDDYVQETARKLRAAGIRCDVQ-SQERLA 553

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
             +R     KIP++ + G++EA + ++ +R +       +S+ D +
Sbjct: 554 KLVRNAEKAKIPVMCVVGEQEAKDGTLAVRTYADGDQGVLSVDDVV 599


>gi|87124051|ref|ZP_01079901.1| threonyl-tRNA synthetase [Synechococcus sp. RS9917]
 gi|86168620|gb|EAQ69877.1| threonyl-tRNA synthetase [Synechococcus sp. RS9917]
          Length = 612

 Score =  499 bits (1284), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 255/576 (44%), Positives = 357/576 (61%), Gaps = 17/576 (2%)

Query: 51  SDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK 110
           + PV + ++ +    +   L  IRHS +H+MA AVQ ++P+ QV IGP  E GFYYDFD 
Sbjct: 15  TTPVPDAAVVLPKTSESNQLLRIRHSMSHVMAMAVQHLFPQAQVTIGPWTETGFYYDFDN 74

Query: 111 EQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN 170
             PF+  +L  I K+M +II R  P  +  +S ++A    +++ E YK+EIL  +  +E 
Sbjct: 75  PDPFTEADLKAIRKEMIKIINRKLPLERIAVSRDEAEAKIKAQNEPYKLEILAGL--QEP 132

Query: 171 VTLYRQGE-WFDLCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQ 228
           +TLY  GE W+DLC GPHV +T ++  K F L  VAGAYWRGD  +  L RIYGTAW T 
Sbjct: 133 ITLYTLGEQWWDLCAGPHVDNTSELNPKAFALESVAGAYWRGDETKAQLQRIYGTAWETP 192

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYMRRK- 286
           ++L +Y    EE+ +RDHR+L +++DLF I  E G+G++FWH +G ++   +  + R+  
Sbjct: 193 EQLAEYQRRKEEALRRDHRRLGKDLDLFSIEDEAGAGLVFWHPRGARMRLLIEDFWRQAH 252

Query: 287 IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA 346
            +  Y+ + TP V D  LW+ SGH D Y  +MF     D+     R + LKPMNCP HV 
Sbjct: 253 FEGGYDLLYTPHVADIGLWKTSGHLDFYSESMFGPMQVDE-----REYQLKPMNCPFHVL 307

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
            +   L+SYRELP+R AE G+VYR E  G +HGLMRVRGFTQDDAHVFC  EQ+ +E L+
Sbjct: 308 TYASRLRSYRELPIRWAELGTVYRYERPGVMHGLMRVRGFTQDDAHVFCLPEQISDEILR 367

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           I NL  +I   F F    + LSTRPEK +G DA+WD A    +G+++ ++          
Sbjct: 368 ILNLTETILSAFDFRNYEINLSTRPEKSIGDDAVWDLA---TQGLIEALERKGW---AYK 421

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
           V  G GAFYGPK +  ++DAIGR WQC TIQ+DFNLP RF   YV +   K  P+MIHRA
Sbjct: 422 VDAGGGAFYGPKIDLKIEDAIGRMWQCSTIQLDFNLPERFALDYVAADGSKQRPIMIHRA 481

Query: 527 VFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF 586
           +FGS+ERF GIM EN+ G+ P WL+P Q  +  +T   +  AQ++++ L++  +    D 
Sbjct: 482 IFGSLERFFGIMTENYAGDFPFWLAPEQIRLLPVTDEVLADAQQLSDQLRAAGIRATVDR 541

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
             E +   IR     KIP++ + G KEA + S+ +R
Sbjct: 542 SGERLGKLIRTGEQMKIPLLAVIGAKEAEQGSVSLR 577


>gi|189345705|ref|YP_001942234.1| threonyl-tRNA synthetase [Chlorobium limicola DSM 245]
 gi|238692169|sp|B3EEC1|SYT_CHLL2 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|189339852|gb|ACD89255.1| threonyl-tRNA synthetase [Chlorobium limicola DSM 245]
          Length = 657

 Score =  499 bits (1284), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 264/651 (40%), Positives = 395/651 (60%), Gaps = 16/651 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           + I +T PDG++KN P  +TG D+A SI + LA  A+AV INGK  DL  PV  + +IEI
Sbjct: 9   ASIAITLPDGTVKNVPSGSTGFDIALSIGKRLADDALAVTINGKPTDLHAPVLCDANIEI 68

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +T +      +  H+ +HIMA+A++ I+P  +   GP  E GFYYD   E  F  ++L  
Sbjct: 69  VTFDSQLGRDIFWHTASHIMAQAIEEIFPGSRFGAGPATEQGFYYDVASEHRFREEDLRA 128

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFES-KKEAYKVEILE-SIPAKENVTLYRQGEW 179
           IE+KM EI  R+    ++ +    A   F S + + YKVEILE ++   + V+LY QG++
Sbjct: 129 IEQKMLEIAKRNIMLQREEMKRVDAIAYFTSVRNDPYKVEILEDTLKHVDTVSLYHQGDF 188

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLC GPH+ ST ++K    L  ++ +YWRGDS+R  + RIYG A+ + + L +++   E
Sbjct: 189 ADLCTGPHLPSTSRLKAVL-LSNISSSYWRGDSSRENMQRIYGIAFPSDKLLKEHIARQE 247

Query: 240 ESEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTP 297
           E+++RDHRKL  E++LF ++ E GSG+  W  KG  I   L ++++  + K  Y  + TP
Sbjct: 248 EAKRRDHRKLGTELELFMLSPEIGSGLPVWLPKGAVIRSELETFLKEEQRKRGYLPVYTP 307

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  L+++SGH+  Y  + F      D       + LKPMNCP H  +++  L+SYR+
Sbjct: 308 HIGNIELYKRSGHYPYYSDSQFPPLTYHDEDGKQEQYLLKPMNCPHHHLIYSSKLRSYRD 367

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+RL EFG+VYR+E SG L+GL+R RGFTQDD+H++CT EQ+ +E     +L   ++  
Sbjct: 368 LPIRLTEFGTVYRHEQSGELNGLVRARGFTQDDSHIYCTPEQLVDEICNAIDLTQFVFGT 427

Query: 418 FGFEKIMVKLS----TRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
            GF ++  +LS       +K  G+  +W+ AE  ++   D +       I+  + +GE +
Sbjct: 428 LGFSEVQTRLSMHDPANQQKYGGTAEIWEQAEKDVREAADRMG------IDYFIGVGEAS 481

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK ++I++DA+GR WQ GT+QVD+ +P RF+  Y+ S  +K  PV+IHRA FGS+ER
Sbjct: 482 FYGPKIDFIVRDALGRKWQLGTVQVDYVMPERFDLSYIGSDGQKHRPVVIHRAPFGSMER 541

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           FIG++IE+  GN PLWL+P+QA+V  I     +YA+ I   L +  + +E D RNE I  
Sbjct: 542 FIGVLIEHTAGNFPLWLAPVQAVVLPIAEEVHDYAKTIHTALLAAGIRVEIDTRNEKIGR 601

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIRE  I KIP +II G KE     I +RR  S      ++   I IL KE
Sbjct: 602 KIREAEIGKIPCMIIVGQKERDSGEISLRRHRSGDMGSFTVPGLIDILKKE 652


>gi|56751513|ref|YP_172214.1| threonyl-tRNA synthetase [Synechococcus elongatus PCC 6301]
 gi|73919835|sp|Q5N1X6|SYT_SYNP6 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|56686472|dbj|BAD79694.1| threonyl-tRNA synthetase [Synechococcus elongatus PCC 6301]
          Length = 607

 Score =  498 bits (1283), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 252/601 (41%), Positives = 382/601 (63%), Gaps = 19/601 (3%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSD 117
           +I++    +   L  IRH+ +H+MA AVQ ++P+ QV IGP  E GFYYDFD  +PF+  
Sbjct: 13  AIQLPKTSESAQLKRIRHTMSHVMAMAVQKLFPKAQVTIGPWTETGFYYDFDTPEPFTEA 72

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +L  I+K+M +II +  P +++ +S E+A++  E+  E YK+EIL+ +   E +TLY  G
Sbjct: 73  DLKAIKKEMVKIIQQKLPVVREEVSREEAQQRIEALGEPYKLEILQGL--TEPITLYHLG 130

Query: 178 E-WFDLCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
           + W+DLC GPHV +T ++  K F L  VAGAYWRGD  +  L RIYGTAW T ++LT+Y 
Sbjct: 131 DRWWDLCAGPHVETTAELNPKAFDLESVAGAYWRGDETKAQLQRIYGTAWETPEQLTEYK 190

Query: 236 YFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEE 293
              EE+ KRDHRKL RE+ LF  A+  G G+  W  KG  +  TL  ++++ ++K  Y+ 
Sbjct: 191 RRKEEALKRDHRKLGRELGLFLFADPVGPGLPLWTPKGTILRSTLEDFLKQEQMKRGYQS 250

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL-RTFALKPMNCPGHVAVFNHGL 352
           + TP +    L++ SGHW +YR +MF +   DD  + L + F LKPMNCP H+ ++ + L
Sbjct: 251 VVTPHLARVDLFKVSGHWQNYREDMFPMMAEDDEARGLEQGFVLKPMNCPFHIQIYKNEL 310

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
           +SYRELP+RLAEFG+VYR E SG L GL RVRGFT DD+H+F   +Q+ +E L + +LI+
Sbjct: 311 RSYRELPIRLAEFGTVYRYEQSGELGGLTRVRGFTVDDSHLFVRPDQLASEFLSVVDLIL 370

Query: 413 SIYKDFGFEKIMVKLSTR-PE--KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL 469
           S++K    +K   +LS R PE  K +GSD +W+ AE+ ++   +T+       ++  + +
Sbjct: 371 SVFKALNLKKFKARLSFRDPESDKYIGSDDVWEKAESAIQAAAETLG------MDYFIGV 424

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG 529
           GE AFYGPK ++I +DA+ R+WQ GT+QVD+NLP RF+  YV     +  PVMIHRA FG
Sbjct: 425 GEAAFYGPKLDFIFQDALDREWQLGTVQVDYNLPERFDLEYVAEDGSRQRPVMIHRAPFG 484

Query: 530 SIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE 589
           S+ER IGI+IE + G+ PLWL+P Q  +  +T + ++Y Q++A+ L++  + ++ D   +
Sbjct: 485 SLERLIGILIEEYAGDFPLWLAPEQIRLLPVTETVLDYCQQVADQLRAIGVRVQVDCSGD 544

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK---ESL 646
            +   IR     KIP++ + G +EA   ++ IR   +     +++ D    L+    E L
Sbjct: 545 RLGKLIRNAEKAKIPVMAVIGAQEAESETLSIRTRATGDLGSLTVADLTKRLSSAIAEKL 604

Query: 647 P 647
           P
Sbjct: 605 P 605


>gi|300087925|ref|YP_003758447.1| threonyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
 gi|299527658|gb|ADJ26126.1| threonyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
          Length = 584

 Score =  498 bits (1283), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 248/590 (42%), Positives = 364/590 (61%), Gaps = 22/590 (3%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L  IRHS AHIMA+AV  I+P  +  IGP I++GFYYDF+  +P   ++LA+IE  
Sbjct: 6   DQSKLEAIRHSAAHIMAQAVLRIFPSARFGIGPAIDNGFYYDFELPRPLVPEDLAEIEAG 65

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M  I+  + PF ++ ++ ++A ELF S  + YK+E++  +P  E +T+YR G++FDLCRG
Sbjct: 66  MTAIVKENQPFSRETVTRQQAEELFAS--QPYKLELIRELPNDEEITIYRNGDFFDLCRG 123

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV  T +VK F KL+ +AGAYWRGD   PML RIYGTA+  + EL +YL  L E+E RD
Sbjct: 124 PHVSHTARVKSF-KLLSIAGAYWRGDEKNPMLQRIYGTAFGNRTELDEYLTSLAEAEARD 182

Query: 246 HRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           HR++ ++++LF   ED G G++ +  K  +I  T+  + R+   D  YE + TP +   +
Sbjct: 183 HRRINKQLNLFVTPEDVGGGLVIYGPKAGRIRTTVEEFWRKAHYDHGYELLYTPHIGRSN 242

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+ SGH  +YR  M++    D      + + +KPMNCP H+  +   ++SYR+LP+R A
Sbjct: 243 LWETSGHLQNYRDIMYSPMDIDG-----QDYYVKPMNCPFHILFYKSQMRSYRDLPLRWA 297

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           E G+VYR E SG LHGL+RVRGFTQDDAH+ CT EQ+  E  ++      +++ FGF  +
Sbjct: 298 ELGTVYRYERSGVLHGLLRVRGFTQDDAHIICTPEQIETEIDEVLRFSFEMWRTFGFTDL 357

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            + L+TRPEK +G+D  W  A + ++ V+D         +   +  G GAFYGPK +  +
Sbjct: 358 KLFLATRPEKAIGTDLQWQQASDALRRVMDARG------LEYSLDEGGGAFYGPKIDIKV 411

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D +GR+WQ  TIQ DFNLP RF+  Y     ++  P M+HRA+ GS ERF G++IE++ 
Sbjct: 412 RDVLGREWQMTTIQFDFNLPERFDMVYTGQDGQEHRPYMVHRALLGSWERFFGLLIEHYG 471

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P+WL P Q  V  I    +EYAQEI   LK   + +  D R+ET+N KIR+  + KI
Sbjct: 472 GAFPVWLHPEQVAVLPIADRHLEYAQEITAKLKKAGVRVALDDRSETVNMKIRQAQLDKI 531

Query: 604 PIIIICGDKEASERSIGIR------RFGSTTTQKVSLLDAIPILTKESLP 647
           P I++ GDKE  + ++ +R      +FG      V+L+  +      +LP
Sbjct: 532 PYIVVIGDKELEKGTLAVRLRTGQQKFGVPPNDFVTLIRQVIEERSSNLP 581


>gi|81301415|ref|YP_401623.1| threonyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
 gi|123769177|sp|Q31JY3|SYT_SYNE7 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|81170296|gb|ABB58636.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Synechococcus
           elongatus PCC 7942]
          Length = 604

 Score =  498 bits (1283), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 252/601 (41%), Positives = 382/601 (63%), Gaps = 19/601 (3%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSD 117
           +I++    +   L  IRH+ +H+MA AVQ ++P+ QV IGP  E GFYYDFD  +PF+  
Sbjct: 10  AIQLPKTSESAQLKRIRHTMSHVMAMAVQKLFPKAQVTIGPWTETGFYYDFDTPEPFTEA 69

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +L  I+K+M +II +  P +++ +S E+A++  E+  E YK+EIL+ +   E +TLY  G
Sbjct: 70  DLKAIKKEMVKIIQQKLPVVREEVSREEAQQRIEALGEPYKLEILQGL--TEPITLYHLG 127

Query: 178 E-WFDLCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
           + W+DLC GPHV +T ++  K F L  VAGAYWRGD  +  L RIYGTAW T ++LT+Y 
Sbjct: 128 DRWWDLCAGPHVETTAELNPKAFDLESVAGAYWRGDETKAQLQRIYGTAWETPEQLTEYK 187

Query: 236 YFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEE 293
              EE+ KRDHRKL RE+ LF  A+  G G+  W  KG  +  TL  ++++ ++K  Y+ 
Sbjct: 188 RRKEEALKRDHRKLGRELGLFLFADPVGPGLPLWTPKGTILRSTLEDFLKQEQMKRGYQS 247

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL-RTFALKPMNCPGHVAVFNHGL 352
           + TP +    L++ SGHW +YR +MF +   DD  + L + F LKPMNCP H+ ++ + L
Sbjct: 248 VVTPHLARVDLFKVSGHWQNYREDMFPMMAEDDEARGLEQGFVLKPMNCPFHIQIYKNEL 307

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
           +SYRELP+RLAEFG+VYR E SG L GL RVRGFT DD+H+F   +Q+ +E L + +LI+
Sbjct: 308 RSYRELPIRLAEFGTVYRYEQSGELGGLTRVRGFTVDDSHLFVRPDQLASEFLSVVDLIL 367

Query: 413 SIYKDFGFEKIMVKLSTR-PE--KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL 469
           S++K    +K   +LS R PE  K +GSD +W+ AE+ ++   +T+       ++  + +
Sbjct: 368 SVFKALNLKKFKARLSFRDPESDKYIGSDDVWEKAESAIQAAAETLG------MDYFIGV 421

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG 529
           GE AFYGPK ++I +DA+ R+WQ GT+QVD+NLP RF+  YV     +  PVMIHRA FG
Sbjct: 422 GEAAFYGPKLDFIFQDALDREWQLGTVQVDYNLPERFDLEYVAEDGSRQRPVMIHRAPFG 481

Query: 530 SIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE 589
           S+ER IGI+IE + G+ PLWL+P Q  +  +T + ++Y Q++A+ L++  + ++ D   +
Sbjct: 482 SLERLIGILIEEYAGDFPLWLAPEQIRLLPVTETVLDYCQQVADQLRAIGVRVQVDCSGD 541

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK---ESL 646
            +   IR     KIP++ + G +EA   ++ IR   +     +++ D    L+    E L
Sbjct: 542 RLGKLIRNAEKAKIPVMAVIGAQEAESETLSIRTRATGDLGSLTVADLTKRLSSAIAEKL 601

Query: 647 P 647
           P
Sbjct: 602 P 602


>gi|110598676|ref|ZP_01386941.1| threonyl-tRNA synthetase [Chlorobium ferrooxidans DSM 13031]
 gi|110339729|gb|EAT58239.1| threonyl-tRNA synthetase [Chlorobium ferrooxidans DSM 13031]
          Length = 657

 Score =  498 bits (1283), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 254/628 (40%), Positives = 387/628 (61%), Gaps = 16/628 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I +T PDG++++ P  +TG D+A SI R LA+ A+A+ +NG + DLS P+  +  +EI+T
Sbjct: 11  IAITLPDGTVRSCPSGSTGYDIALSIGRKLAQDALALKVNGSLVDLSTPLTSDARVEIVT 70

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            + P    +  HS +H+MA+A++ ++   +   GP IE GFYYD   E  F  ++L  IE
Sbjct: 71  FDSPEGKDIFWHSSSHLMAQAIEELFAGSRFGAGPSIEQGFYYDIASEHRFREEDLRLIE 130

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKK-EAYKVEILE-SIPAKENVTLYRQGEWFD 181
           +KM EI  RDS   ++ L+   A E F++K+ + YKVEILE ++   + V+LY Q  + D
Sbjct: 131 QKMLEISKRDSKIQREELTRSAAIEFFKNKRNDPYKVEILEETLKDVDTVSLYHQDGFTD 190

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LC GPH+ +T +VK    L  ++ +YWRGDS+R  + RIYG  + + ++L +Y+  LEE+
Sbjct: 191 LCTGPHLPTTSKVKAVL-LTNISSSYWRGDSSREQMQRIYGITFPSDKQLKEYVTLLEEA 249

Query: 242 EKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           ++RDHRKL  E++LF + AE GSG+  W  KG  I   L S+++  + K  Y  + TP +
Sbjct: 250 KRRDHRKLGAELELFMLSAEVGSGLPIWLPKGAIIRNELESFLKEEQRKRGYLPVYTPHI 309

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +  L+++SGH+  Y  + F      D       + LKPMNCP H  +++  ++SYR+LP
Sbjct: 310 GNIELYKRSGHYPYYSDSQFPPLTYHDEEGRKEQYLLKPMNCPHHHLIYSSKMRSYRDLP 369

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +RL EFG+VYR+E SG L+GL+R RGFTQDD+H++C  +Q+ +E      L   ++   G
Sbjct: 370 IRLTEFGTVYRHEQSGELNGLVRARGFTQDDSHIYCRPDQLVDEICSAIELTQFVFGTLG 429

Query: 420 FEKIMVKLSTR-PEKRV---GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           F  +  +LS   PE +    G+  +W  AE  +K   D +       I   + +GE +FY
Sbjct: 430 FNDVQTRLSMHDPENQTKYGGTAEVWAQAEKDVKEAADRMG------IEYFIGIGEASFY 483

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++I++DA+GR WQ GT+QVD+ +P RF+  Y+ S S+K  PV+IHRA FGS+ERFI
Sbjct: 484 GPKIDFIVRDALGRKWQLGTVQVDYVMPERFDLTYIGSDSQKHRPVVIHRAPFGSMERFI 543

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
           G++IE+  GN PLWL+P+QA+V  I     +YA+ +   L    +  E D RNE I  KI
Sbjct: 544 GVLIEHTAGNFPLWLAPVQAVVLPIAEDVHDYAKSVQQALLGAGIRSELDTRNEKIGKKI 603

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRR 623
           RE  + K+P +I+ G KE     + +RR
Sbjct: 604 REAELAKVPCMIVIGQKEKESGEVSLRR 631


>gi|150007315|ref|YP_001302058.1| threonyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503]
 gi|255014060|ref|ZP_05286186.1| threonyl-tRNA synthetase [Bacteroides sp. 2_1_7]
 gi|256839604|ref|ZP_05545113.1| threonyl-tRNA synthetase [Parabacteroides sp. D13]
 gi|166225472|sp|A6L9S2|SYT_PARD8 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|149935739|gb|ABR42436.1| threonyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503]
 gi|256738534|gb|EEU51859.1| threonyl-tRNA synthetase [Parabacteroides sp. D13]
          Length = 651

 Score =  498 bits (1282), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 257/648 (39%), Positives = 390/648 (60%), Gaps = 19/648 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+TFPD S++ +    T   +AESIS  LA++ +A ++NG+V DLS P+ +  +++++ 
Sbjct: 2   IKITFPDNSVREYAKGTTAMQIAESISSRLAQEVLAASVNGEVWDLSRPINDDATVKLLK 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
            ED        HS AH+MAEA+Q ++P ++  IGP IE+GFYYD D  E      + A I
Sbjct: 62  WEDEEGKHAFWHSSAHLMAEALQELYPGIKFGIGPAIENGFYYDVDPGEAVIKEGDFAAI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E KM E++A+     +Q ++   A ++F  + E YK E++  +     +T Y QG + DL
Sbjct: 122 EAKMLELVAKKEEIKRQDITKADAMKMFGDRGEEYKTELISEL-EDGTITTYTQGSFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ +T  +K   K++ VAGAYWRGD  R  L R+YG  +  ++ L +YL  LEE++
Sbjct: 181 CRGPHLPNTSYLKAV-KILSVAGAYWRGDEKRKQLVRLYGITFPKKKMLDEYLTLLEEAK 239

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           KRDHRK+ +EMDLF  ++  G G+  W  KG  +   L  ++RR + + +Y+E+  P + 
Sbjct: 240 KRDHRKIGKEMDLFMFSDTVGKGLPMWLPKGTALRLRLQEFLRRIQARYNYQEVMCPPIG 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ L+  SGH+  Y  + F       T ++   + LKPMNCP H  ++ +  +SY++LP+
Sbjct: 300 NKLLYITSGHYAKYGKDSFQ---PIHTPEEGEEYFLKPMNCPHHCMIYKNSPRSYKDLPL 356

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLAEFG+V R E SG LHGL RVR FTQDDAH+FC  +Q+  E L + ++I  ++K   F
Sbjct: 357 RLAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKQEFLNVMDIISIVFKTMNF 416

Query: 421 EKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           E    ++S R     EK +GSD  W+ AE  +      ++   +  +   +  GE AFYG
Sbjct: 417 ENFEAQISLRDKVNREKYIGSDENWEKAEQAI------VEACEEKGLKAKIEYGEAAFYG 470

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK ++++KDAIGR WQ GTIQVD+NLP RF   Y  + ++K  PVMIHRA FGS+ERF+ 
Sbjct: 471 PKLDFMVKDAIGRRWQLGTIQVDYNLPERFQLEYTGADNQKHRPVMIHRAPFGSMERFVA 530

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           ++IE+  G  PLWL+P Q  +  I+    +YA +IA  L +  +    D RNE I  KIR
Sbjct: 531 VLIEHTAGKFPLWLTPEQVCIMPISEKFNDYAWQIARELGNQEIRAIVDDRNEKIGRKIR 590

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           ++ +K+IP ++I G+KEA    + +R+ G      + +     +L  E
Sbjct: 591 DNELKRIPYMLIVGEKEAENSEVSVRKQGEGDKGSMKIATFAALLNGE 638


>gi|298206753|ref|YP_003714932.1| threonyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
 gi|83849384|gb|EAP87252.1| threonyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
          Length = 648

 Score =  498 bits (1282), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 259/630 (41%), Positives = 396/630 (62%), Gaps = 19/630 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           I +T PDGS+K F   AT  DVA+SIS  LA+  ++ + NG   + + P+ E GS+ + T
Sbjct: 2   INITLPDGSVKEFEAGATAMDVAKSISEGLARNVISASFNGTKVETTTPLHEDGSLILFT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQI 122
             D        HS +H+MA+A+Q ++P +++ IGP I++GFYYD D  +Q  S ++  +I
Sbjct: 62  FRDEEGKKAFWHSTSHVMADALQQLYPGIKLTIGPAIDNGFYYDIDFGDQKISENDFKKI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E KM EI      F  + ++  +A E ++++   +KVE++E++    ++T      + DL
Sbjct: 122 EDKMLEIARGKHEFQLRSVTKAEALEFYKNENNPFKVELIENL-TDGDITFCDHSNFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRG H+ +TG +K   KL+ +AGAYWRGD   P L+R+YG ++  Q+EL +YL  LEE++
Sbjct: 181 CRGGHIPNTGIIKAV-KLLNIAGAYWRGDEKNPQLTRVYGVSFPKQKELKEYLELLEEAK 239

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           +RDHRKL +E+ LF  ++  G G+  W  KG  + + L +++++ + K  YE + TP + 
Sbjct: 240 RRDHRKLGKELSLFTFSQKVGQGLPLWLPKGAALRERLENFLKKAQKKAGYEMVVTPHIG 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            + L+  SGH+  Y  + F       T  +   F LKPMNCP H  ++N+   SYR+LP 
Sbjct: 300 QKELYVTSGHYAKYGEDSFQ---PISTPAEGEEFLLKPMNCPHHCEIYNNSPWSYRDLPK 356

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R AEFG+VYR E SG LHGL RVRGFTQDDAH+FCT +Q+  E  K+ +L + ++   GF
Sbjct: 357 RYAEFGTVYRYEQSGELHGLSRVRGFTQDDAHIFCTPDQLDEEFKKVIDLTMYVFSSLGF 416

Query: 421 EKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           E    ++S R    P+K +G +  W+ AEN    +L  +K+     +N  V  GE AFYG
Sbjct: 417 ENFTTQVSLRDPENPDKYIGKEENWEKAEN---AILSAVKDKG---LNYIVETGEAAFYG 470

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK ++++KDA+GR WQ GTIQVD+NLP RF+  Y  S +E   PVMIHRA FGS+ERF+ 
Sbjct: 471 PKLDFMVKDALGRSWQLGTIQVDYNLPERFDLTYKGSDNELHRPVMIHRAPFGSMERFVA 530

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           I++E+  GN PLWL P QAI+ +++     Y++++ NLL++H +   TD R+ET+  KIR
Sbjct: 531 ILLEHTAGNFPLWLMPEQAIILSLSEKYENYSKKVLNLLENHEIRALTDHRSETMGKKIR 590

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGS 626
           E  + KIP ++I G++E ++ ++ +R+ G 
Sbjct: 591 EAEVNKIPYMLIVGEQEENDGTVSVRKHGG 620


>gi|301310685|ref|ZP_07216624.1| threonine--tRNA ligase [Bacteroides sp. 20_3]
 gi|300832259|gb|EFK62890.1| threonine--tRNA ligase [Bacteroides sp. 20_3]
          Length = 649

 Score =  498 bits (1282), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 257/648 (39%), Positives = 390/648 (60%), Gaps = 19/648 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+TFPD S++ +    T   +AESIS  LA++ +A ++NG+V DLS P+ +  +++++ 
Sbjct: 2   IKITFPDNSVREYAKGTTAMQIAESISSRLAQEVLAASVNGEVWDLSRPINDDATVKLLK 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
            ED        HS AH+MAEA+Q ++P ++  IGP IE+GFYYD D  E      + A I
Sbjct: 62  WEDEEGKHAFWHSSAHLMAEALQELYPGIKFGIGPAIENGFYYDVDPGEAVIKEGDFAAI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E KM E++A+     +Q ++   A ++F  + E YK E++  +     +T Y QG + DL
Sbjct: 122 EAKMLELVAKKEEIKRQDITKADAMKMFGDRGEEYKTELISEL-EDGTITTYTQGSFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ +T  +K   K++ VAGAYWRGD  R  L R+YG  +  ++ L +YL  LEE++
Sbjct: 181 CRGPHLPNTSYLKAV-KILSVAGAYWRGDEKRKQLVRLYGITFPKKKMLDEYLTLLEEAK 239

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           KRDHRK+ +EMDLF  ++  G G+  W  KG  +   L  ++RR + + +Y+E+  P + 
Sbjct: 240 KRDHRKIGKEMDLFMFSDTVGKGLPMWLPKGTALRLRLQEFLRRIQARYNYQEVMCPPIG 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ L+  SGH+  Y  + F       T ++   + LKPMNCP H  ++ +  +SY++LP+
Sbjct: 300 NKLLYITSGHYAKYGKDSFQ---PIHTPEEGEEYFLKPMNCPHHCMIYKNSPRSYKDLPL 356

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLAEFG+V R E SG LHGL RVR FTQDDAH+FC  +Q+  E L + ++I  ++K   F
Sbjct: 357 RLAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKQEFLNVMDIISIVFKTMNF 416

Query: 421 EKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           E    ++S R     EK +GSD  W+ AE  +      ++   +  +   +  GE AFYG
Sbjct: 417 ENFEAQISLRDKVNREKYIGSDENWEKAEQAI------VEACEEKGLKAKIEYGEAAFYG 470

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK ++++KDAIGR WQ GTIQVD+NLP RF   Y  + ++K  PVMIHRA FGS+ERF+ 
Sbjct: 471 PKLDFMVKDAIGRRWQLGTIQVDYNLPERFQLEYTGADNQKHRPVMIHRAPFGSMERFVA 530

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           ++IE+  G  PLWL+P Q  +  I+    +YA +IA  L +  +    D RNE I  KIR
Sbjct: 531 VLIEHTAGKFPLWLTPEQVCIMPISEKFNDYAWQIARELGNQEIRAIVDDRNEKIGRKIR 590

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           ++ +K+IP ++I G+KEA    + +R+ G      + +     +L  E
Sbjct: 591 DNELKRIPYMLIVGEKEAENGEVSVRKQGEGDKGSMKIATFAALLNGE 638


>gi|262382112|ref|ZP_06075250.1| threonyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
 gi|298375301|ref|ZP_06985258.1| threonine--tRNA ligase [Bacteroides sp. 3_1_19]
 gi|262297289|gb|EEY85219.1| threonyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
 gi|298267801|gb|EFI09457.1| threonine--tRNA ligase [Bacteroides sp. 3_1_19]
          Length = 651

 Score =  498 bits (1281), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 257/648 (39%), Positives = 390/648 (60%), Gaps = 19/648 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+TFPD S++ +    T   +AESIS  LA++ +A ++NG+V DLS P+ +  +++++ 
Sbjct: 2   IKITFPDNSVREYAKGTTAMQIAESISSRLAQEVLAASVNGEVWDLSRPINDDATVKLLK 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
            ED        HS AH+MAEA+Q ++P ++  IGP IE+GFYYD D  E      + A I
Sbjct: 62  WEDEEGKHAFWHSSAHLMAEALQELYPGIKFGIGPAIENGFYYDVDPGEAVIKEGDFAAI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E KM E++A+     +Q ++   A ++F  + E YK E++  +     +T Y QG + DL
Sbjct: 122 EAKMLELVAKKEEIKRQDITKADAMKMFGDRGEEYKTELISEL-EDGTITTYTQGSFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ +T  +K   K++ VAGAYWRGD  R  L R+YG  +  ++ L +YL  LEE++
Sbjct: 181 CRGPHLPNTSYLKAV-KILSVAGAYWRGDEKRKQLVRLYGITFPKKKMLDEYLTLLEEAK 239

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           KRDHRK+ +EMDLF  ++  G G+  W  KG  +   L  ++RR + + +Y+E+  P + 
Sbjct: 240 KRDHRKIGKEMDLFMFSDTVGKGLPMWLPKGTALRLRLQEFLRRIQARYNYQEVMCPPIG 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ L+  SGH+  Y  + F       T ++   + LKPMNCP H  ++ +  +SY++LP+
Sbjct: 300 NKLLYITSGHYAKYGKDSFQ---PIHTPEEGEEYFLKPMNCPHHCMIYKNSPRSYKDLPL 356

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLAEFG+V R E SG LHGL RVR FTQDDAH+FC  +Q+  E L + ++I  ++K   F
Sbjct: 357 RLAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKQEFLNVMDIISIVFKTMNF 416

Query: 421 EKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           E    ++S R     EK +GSD  W+ AE  +      ++   +  +   +  GE AFYG
Sbjct: 417 ENFEAQISLRDKVNREKYIGSDENWEKAEQAI------VEACEEKGLKAKIEYGEAAFYG 470

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK ++++KDAIGR WQ GTIQVD+NLP RF   Y  + ++K  PVMIHRA FGS+ERF+ 
Sbjct: 471 PKLDFMVKDAIGRRWQLGTIQVDYNLPERFQLEYTGADNQKHRPVMIHRAPFGSMERFVA 530

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           ++IE+  G  PLWL+P Q  +  I+    +YA +IA  L +  +    D RNE I  KIR
Sbjct: 531 VLIEHTAGKFPLWLTPEQVCIMPISEKFNDYAWQIARELGNQEIRAIVDDRNEKIGRKIR 590

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           ++ +K+IP ++I G+KEA    + +R+ G      + +     +L  E
Sbjct: 591 DNELKRIPYMLIVGEKEAENGEVSVRKQGEGDKGSMKIATFAALLNGE 638


>gi|326336128|ref|ZP_08202300.1| threonine--tRNA ligase [Capnocytophaga sp. oral taxon 338 str.
           F0234]
 gi|325691637|gb|EGD33604.1| threonine--tRNA ligase [Capnocytophaga sp. oral taxon 338 str.
           F0234]
          Length = 649

 Score =  497 bits (1280), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 263/649 (40%), Positives = 395/649 (60%), Gaps = 22/649 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           IK+T PDGS+K +    T ++VA  IS + A+  ++ + NGK  +   P+  +GS+ + T
Sbjct: 2   IKITLPDGSVKEYRKGVTPAEVAHDISDAFARNVISASFNGKTIETVTPLETDGSLVLYT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQI 122
            E+P       HS AHI+A+A++ ++P +++ IGP I +GFYYD D      +  +   I
Sbjct: 62  WENPEGKKAFWHSSAHILAQALEELFPNIKLTIGPAIANGFYYDVDFNGNTITDKDFPAI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E KM EI      F  + +S  +A   ++ K E YK E++E++     +T      + DL
Sbjct: 122 EAKMLEIARGKYEFKMRPVSKAEALSYYKGKNE-YKTELIEAL-EDGTITFCDHSTFTDL 179

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRG H+ +TG VK   K++ +AGAYWRGD N P L+R+YG ++  Q++LT+YL  LEE++
Sbjct: 180 CRGGHIPNTGFVKAV-KILSIAGAYWRGDENNPQLTRVYGISFPKQKDLTEYLTLLEEAK 238

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
           KRDHRKL +E++LF  +   G G+  W  KG  + + L +++R+  K   YE++ TP + 
Sbjct: 239 KRDHRKLGKELELFTFSNKVGQGLPLWLPKGAALRERLEAFLRKAQKQAGYEQVVTPHIG 298

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            ++L+  SGHW+ Y  + F       T  +   + LKPMNCP H  ++N    SY++LP 
Sbjct: 299 HKNLYVTSGHWEKYGKDSFQPIA---TPNEGEEYLLKPMNCPHHCEIYNSHPWSYKDLPK 355

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R AEFG+VYR E SG LHGL RVR FTQDDAH+FCT EQ+  E   + +L++ ++   GF
Sbjct: 356 RFAEFGTVYRYEQSGELHGLTRVRCFTQDDAHIFCTPEQLDAEFKHVIDLVLYVFGSLGF 415

Query: 421 EKIMVKLSTR-PE---KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL-LGEGAFY 475
           E    ++S R PE   K +GSD  W  AE+        I N+++++  T V+  GE AFY
Sbjct: 416 ENFTAQVSLRDPENLSKYIGSDENWAKAES-------AIINAAKEKNLTYVIETGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDA+GR WQ GTIQVD+NLP RF+ +Y  + +E   PVMIHRA FGS+ERF+
Sbjct: 469 GPKLDFMVKDALGRSWQLGTIQVDYNLPERFDLWYKGADNEMHRPVMIHRAPFGSMERFV 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            I++E+  GNLPLWL P Q  + +++     YA ++ANLL+   L    D RNETI  KI
Sbjct: 529 AILLEHTAGNLPLWLVPEQVNILSVSEKYEGYAYKVANLLQEADLRPHVDNRNETIGKKI 588

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           RE   +K P +II G++E    ++ +R+ G      + + D I ++ +E
Sbjct: 589 REAETQKYPYMIIVGEEEEKNGTLSVRKHGGADLGTMKIADFITLIQEE 637


>gi|312901397|ref|ZP_07760674.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0470]
 gi|311291473|gb|EFQ70029.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0470]
          Length = 626

 Score =  497 bits (1280), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 253/616 (41%), Positives = 389/616 (63%), Gaps = 23/616 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDP-VREGSIEIIT 63
           I +TFPDG++K F    T  DVA+SIS SLAKKA+A   NG + DL  P V +GS+EI+T
Sbjct: 24  IHITFPDGAVKPFDSGVTTFDVAKSISNSLAKKALAGKFNGVLIDLDRPIVEDGSLEIVT 83

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
           P+   +L ++RHS AH+MA A++ ++P ++  +GP I+ GFYYD D  E P ++++L  I
Sbjct: 84  PDHEDALGILRHSSAHLMANALRRLFPNIKFGVGPAIDSGFYYDTDNGESPVTAEDLPAI 143

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M +I+  ++P +++ +S  +A ELF    + YKVE++  +P  E +T+Y QG++ DL
Sbjct: 144 EAEMMKIVKENNPIVRKEISRAEALELFAD--DPYKVELITDLPEDEIITVYDQGDFVDL 201

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRG HV STG+++  FKL+ VAGAYWRG+S+  M+ RIYGTA+  +++L +++   EE++
Sbjct: 202 CRGVHVPSTGRIQ-VFKLLSVAGAYWRGNSDNHMMQRIYGTAFFDKKDLKEFIKMREEAK 260

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVL 300
           +RDHRKL +E+DLF ++++ GSG+ FW  KG  I +T+  Y+  ++I   Y+ + TP + 
Sbjct: 261 ERDHRKLGKELDLFMVSQEVGSGLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIMA 320

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D  L++ SGHWD Y  +MF        + D     L+PMNCP H+ V+ + + SYRELP+
Sbjct: 321 DVELYKTSGHWDHYHEDMFPPM----DMGDGEMLVLRPMNCPHHMMVYKNDIHSYRELPI 376

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  +   L++++Y DF  
Sbjct: 377 RIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVAVYADFNI 436

Query: 421 EKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
                +LS R     +K    DA+W+ A+ ++K  +D ++      ++     GE AFYG
Sbjct: 437 TDYRFRLSYRDPNNTDKYFDDDAMWEKAQAMLKAAMDELE------LDYFEAEGEAAFYG 490

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH-PVMIHRAVFGSIERFI 535
           PK +  +K A+G +    TIQ+DF LP RF+  YV    E  H PV+IHR +  ++ERF+
Sbjct: 491 PKLDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTMERFV 550

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
             + E +KG  P WL+PIQA +  ++  A  EYA EI   L++  L +E D RNE + YK
Sbjct: 551 AYLTEVYKGAFPTWLAPIQATIIPVSVEAHSEYAYEIKERLQAQGLRVEVDDRNEKMGYK 610

Query: 595 IREHSIKKIPIIIICG 610
           IR    +K+P  ++ G
Sbjct: 611 IRASQTQKVPYQLVVG 626


>gi|46447649|ref|YP_009014.1| threonyl-tRNA synthetase [Candidatus Protochlamydia amoebophila
           UWE25]
 gi|73919812|sp|Q6M9L0|SYT_PARUW RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|46401290|emb|CAF24739.1| probable threonine-tRNA ligase [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 650

 Score =  497 bits (1280), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 260/619 (42%), Positives = 377/619 (60%), Gaps = 19/619 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIEIITP-E 65
           +   D S    P  +T  D+A+ ++     +A+  +INGK  DLS P++EG   I+    
Sbjct: 10  IKLKDQSSYEMPSGSTAKDLADKLNLKGPHEALGASINGKTVDLSYPLQEGDQVILWGFN 69

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           DP    +  H+ AH++A+A+  +WP+ Q  IGP IE+GFYYDF      S  +  +IEK+
Sbjct: 70  DPEGKEIFWHTSAHVLAQAILRLWPDAQPTIGPPIENGFYYDF-ANLTISDADFEKIEKE 128

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           MQ II+ +    ++ +S  K+  L + +   YK E++ S   +  +T YRQGE++DLCRG
Sbjct: 129 MQAIISENFQIKREVIS-TKSDALKQFQNNPYKCELINSFEDESTLTGYRQGEFYDLCRG 187

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PH+ + G++K   KLMK AGAYWRGDSN+ ML+RIY  ++  ++ L  YL+ LEE++KRD
Sbjct: 188 PHLFNLGKIKAL-KLMKTAGAYWRGDSNKEMLTRIYAISFPDRKLLKDYLHQLEEAKKRD 246

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHL 304
           H+ L  ++DLF + E+  G+ F H KG  ++  L++Y+R  + + DY EI TP ++ + L
Sbjct: 247 HKLLGAKLDLFSLKEEAPGMPFIHPKGLIVWNQLVAYIRECLSRHDYIEIKTPTMMTKEL 306

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W+ SGHW +YR NMF  +  D      R FA+KPMNCPG +  +     SYRELP+R+AE
Sbjct: 307 WEISGHWGNYRQNMFISQIED------RDFAIKPMNCPGCMLYYKSHTHSYRELPLRIAE 360

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
            G+V+R EPSGSL GL RVR F QDDAH+F     +  E L +  L   IY  FG     
Sbjct: 361 IGNVHRYEPSGSLSGLFRVRSFHQDDAHIFMKPSDIQQEILGVLALADEIYSTFGL-SYR 419

Query: 425 VKLSTRPEKR-VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           ++LSTRPEK  +G+D  W+ A   +KG LD +    + RIN G    +GAFYGPK ++ +
Sbjct: 420 LELSTRPEKNTIGTDHEWEVATAGLKGALDEM--GKEYRINEG----DGAFYGPKIDFHI 473

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +DAI R WQCGTIQ+D  LP +F   Y  S   +  PVMIHRA+FGSIERF GI+IE++ 
Sbjct: 474 RDAINRSWQCGTIQLDMALPEKFELEYTFSDGTRQRPVMIHRAIFGSIERFFGILIEHYV 533

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  PLWLSP Q    T+      YA+E+A   K+    ++ D   E+++ K+R   + + 
Sbjct: 534 GKFPLWLSPSQIRFITVADRHEPYARELAKRFKNAGFHVDVDSTQESVSKKVRNAQLAQF 593

Query: 604 PIIIICGDKEASERSIGIR 622
             I+  GD+E   ++  +R
Sbjct: 594 NYILTIGDQEVEHKTANLR 612


>gi|288801328|ref|ZP_06406782.1| threonine--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039]
 gi|288331711|gb|EFC70195.1| threonine--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039]
          Length = 654

 Score =  497 bits (1280), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 255/641 (39%), Positives = 399/641 (62%), Gaps = 25/641 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           +K+TFPDGS++ +    TG  +AESIS +LA+  V+  +NG+  +L+ P+  + +I +  
Sbjct: 2   VKITFPDGSVREYEAGVTGLQIAESISPALARDVVSCGVNGETTELNMPINSDATIALYK 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ--PFSSDELAQ 121
            +DP       HS AH++AEA+Q ++P +Q   GP IE+GF+YD   +     S ++  +
Sbjct: 62  FDDPEGKKTFWHSSAHLLAEALQELYPGIQFGFGPAIENGFFYDVMTKDGVSISENDFPK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE+KM+E+  ++ P +++ +S   A + F +  + YK E ++       ++ Y QG + D
Sbjct: 122 IEEKMRELAKKNEPIVRKDISKADALKEFSADGQEYKCEHIDLDLEDGTISTYTQGAFTD 181

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ STG +K   KL  VAGA+WRGD+ +  ++RIYG  +  ++ L +YL  +EE+
Sbjct: 182 LCRGPHLMSTGAIKAI-KLTSVAGAFWRGDAEKDQMTRIYGITFPKKKMLDEYLLMIEEA 240

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEINTPQ 298
           +KRDHRK+ +EM+LF  ++  G G+  W  KG ++ +  +  M RKI+    Y+E+  P 
Sbjct: 241 KKRDHRKIGKEMELFMFSDRVGKGMPIWLPKGTEL-RLRLQDMLRKIQKRFGYQEVMCPV 299

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +  ++L+  SGH+  Y  + F       T ++   + LKPMNCP H  VF    +SY++L
Sbjct: 300 LGGKNLYVTSGHYAHYSKDAFRPIT---TPEEGEEYMLKPMNCPHHCEVFAWKPRSYKDL 356

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R++EFG+VYR E SG LHGL RVR FTQDDAH+FC  EQ+ NE L++ ++I ++ K F
Sbjct: 357 PLRISEFGNVYRYEKSGELHGLTRVRAFTQDDAHIFCRPEQVKNEFLRVMDIIQAVLKIF 416

Query: 419 GFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            F+    ++S R     EK +GSD  W +AE   + ++D  K      +     LGE AF
Sbjct: 417 DFKNFEAQISLRDPNNKEKYIGSDEAWHEAE---QAIIDACKEKG---LTAKSELGEAAF 470

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK ++++KDAIGR WQ GTIQVD+NLP RF   Y +  ++K  PVMIHRA FGS+ERF
Sbjct: 471 YGPKLDFMIKDAIGRRWQLGTIQVDYNLPQRFKLEYTDEDNQKKTPVMIHRAPFGSLERF 530

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             ++IE+  G+ PLWL+P Q  +  I+    +YA+E+A    ++ +    D RNE I  K
Sbjct: 531 TAVLIEHTAGHFPLWLTPDQVAILPISEKYNDYAREVARFFDNNGVRATIDDRNEKIGRK 590

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFG----STTTQK 631
           IR++ +K++P ++I G+KE++E  + +R+ G    +T TQ+
Sbjct: 591 IRDNELKRVPYMVIVGEKESAEGLVSMRKQGGGEQATMTQQ 631


>gi|212550461|ref|YP_002308778.1| threonyl-tRNA synthetase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
 gi|229470721|sp|B6YQ95|SYT_AZOPC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|212548699|dbj|BAG83367.1| threonyl-tRNA synthetase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
          Length = 648

 Score =  497 bits (1279), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 257/649 (39%), Positives = 400/649 (61%), Gaps = 20/649 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+TFP+ S +N+ +  T   +AESIS  LA++ ++  +NG++ DLS P+ E  S+++  
Sbjct: 2   IKITFPNTSARNYAIGTTPMQIAESISCRLAEEILSANVNGEMWDLSRPINENASVKLYK 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQP--FSSDELAQ 121
            ED        HS AH++AE++Q ++P +   +GP IE+GFYYD D          +L  
Sbjct: 62  WEDFEGKRTFWHSSAHLLAESLQELYPNIHFGMGPAIENGFYYDVDLGDGVVIKDVDLVT 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEKKMQE+ ++     +Q ++ + A ELF  K E YK+E++  +   + +T+Y QG + D
Sbjct: 122 IEKKMQELASKKLSISRQNVTKQNALELFGKKGETYKIELISKLEDGK-ITVYTQGNFTD 180

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ +T  +K   KL  VA AYW+GD +R  L+RIYG ++  ++EL++YL  +E++
Sbjct: 181 LCRGPHLPNTSYIKAI-KLTSVARAYWKGDESRKQLTRIYGISFPKKEELSEYLALMEKA 239

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           +KRDHR++ +EM+LF  +   G G+  W  KG ++   L  +++R + K  Y+++ TP +
Sbjct: 240 KKRDHRRIGKEMELFTFSHKVGRGLPLWLPKGTQLRLRLEDFLKRIQKKYGYQQVITPHI 299

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            ++ L+  SGH+  Y  + F      +  ++   F LKPMNCP H  ++   L+SY+ELP
Sbjct: 300 GNKTLYIASGHYAKYGKDSFQPIHTPELGEE---FLLKPMNCPHHCEIYKAFLRSYKELP 356

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +RLAEFG+VYR E SG L GL RVRGFTQDDAH+FC+ EQ+  E +K+ +++  I+    
Sbjct: 357 LRLAEFGTVYRYERSGELQGLTRVRGFTQDDAHIFCSPEQVKEELIKVIDIVRVIFCALN 416

Query: 420 FEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           F    V++S R      K +GS+  W ++E  +      I+   + +I   + LGE AFY
Sbjct: 417 FNDYEVQISLRDLNNRIKYIGSEENWKNSEGAI------IEVCQEKKIKAKIKLGEAAFY 470

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDA+GR+WQ GTIQVD+NLP RF   YV + ++K  PVMIHRA FGS+ERF+
Sbjct: 471 GPKLDFMVKDALGRNWQLGTIQVDYNLPERFELEYVGADNQKHRPVMIHRAPFGSMERFV 530

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            +MIE+  G  PLWL   Q ++  ++ +  +YA+EIA       + +  D RNE +  KI
Sbjct: 531 AVMIEHTGGKFPLWLVSDQVVILPVSENYNQYAEEIAKEFHKRDIRVTIDKRNEKVGRKI 590

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R++ +KKIP ++I G+KE     I +R+ G      + + +    L KE
Sbjct: 591 RDNELKKIPYLLIIGEKERRNSEISVRKHGKENIGIMKVTEFAEFLKKE 639


>gi|148988673|ref|ZP_01820106.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
 gi|147925874|gb|EDK76949.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
          Length = 600

 Score =  497 bits (1279), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 251/602 (41%), Positives = 384/602 (63%), Gaps = 23/602 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           I +TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  + E GSIEI+T
Sbjct: 2   INITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGSIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQI 122
           P+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D      S+++L +I
Sbjct: 62  PDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNTAGQISNEDLPRI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWFD 181
           E++MQ+I+  + P +++ ++ ++ARE+F  K + YK+E++E     E  +T+YRQGE+ D
Sbjct: 122 EEEMQKIVKENFPSIREEVTKDEAREIF--KNDPYKLELIEEHSEDEGGLTIYRQGEYVD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++  F L+ VAGAYWRG+S+  M+ RIYGTAW  +++L  YL   EE+
Sbjct: 180 LCRGPHVPSTGRIQ-IFHLLHVAGAYWRGNSDNAMMQRIYGTAWFDKKDLKNYLQMREEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+++ G G+ FW   G  I + L  Y+  +++   Y+ + TP +
Sbjct: 239 KERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVNKELASGYQHVYTPPL 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHWD Y+ +MF        + D   F L+PMNCP H+ VF H + SYRELP
Sbjct: 299 ASVELYKTSGHWDHYQEDMFPTM----DMGDGEEFVLRPMNCPHHIQVFKHHVHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y+DF 
Sbjct: 355 IRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYEDFN 414

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R      K   +D +W++A+ +++  LD +       ++     GE AFY
Sbjct: 415 LTDYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G++    TIQ+DF LP RF+  Y+ +  E   PVMIHR V  ++ERF 
Sbjct: 469 GPKLDIQIKTALGKEETLSTIQLDFLLPERFDLKYIGADGEDHRPVMIHRGVISTMERFT 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IEN+KG  P WL+P Q  +  +++   V+YA E+A  L+   +  + D RNE + +K
Sbjct: 529 AILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAKKLRDRGVRADVDERNEKMQFK 588

Query: 595 IR 596
           IR
Sbjct: 589 IR 590


>gi|229815156|ref|ZP_04445493.1| hypothetical protein COLINT_02202 [Collinsella intestinalis DSM
           13280]
 gi|229809386|gb|EEP45151.1| hypothetical protein COLINT_02202 [Collinsella intestinalis DSM
           13280]
          Length = 595

 Score =  497 bits (1279), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 252/588 (42%), Positives = 372/588 (63%), Gaps = 19/588 (3%)

Query: 45  GKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGF 104
           GKV D+     +GS+  +  ++ +   VIRHS AHIMA+A++ ++PE   A GP  ++GF
Sbjct: 5   GKVLDMKALYNDGSVAEVEADEAQH--VIRHSAAHIMAQAIKHLYPEADFAYGPATDNGF 62

Query: 105 YYDFD-KEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE 163
           YYD D  ++  S D+L  IE +M++I+  +  F    L  E+A  L E + E YKVE + 
Sbjct: 63  YYDVDLGDKKISEDDLPTIEAEMKKIVKENLKFQVFELPREEAIALMEERGEKYKVEHIG 122

Query: 164 SIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
            +     +T Y+QG++ D+C GPH+  T  +K F KL  V+GAYW+ D+N  ML+RI GT
Sbjct: 123 DLADDARITFYQQGDYIDMCVGPHLTYTKALKAF-KLTGVSGAYWKNDANNKMLTRINGT 181

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYM 283
           A+ T+ EL  +L  LEE++KRDHR++ REMDLF + ++  G  F+   G  +  TL+ Y 
Sbjct: 182 AFATKDELEAHLTLLEEAKKRDHRRIGREMDLFMMRDEAPGFPFFLPNGMVLKNTLLDYW 241

Query: 284 RR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
           R    K  Y EI+TPQ++++ LW  SGHWD Y+ NM++      T+ D   + +KPMNCP
Sbjct: 242 REIHHKAGYVEISTPQIMNKSLWLTSGHWDHYKDNMYS------TMIDDEEYCIKPMNCP 295

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN 402
           G V V++    SYRELP+R  E G V+R+E  G+LHGL RVR F QDDAH+F T EQ+ +
Sbjct: 296 GGVLVYSSKPHSYRELPIRAGEIGLVHRHELRGALHGLFRVRCFNQDDAHLFVTPEQLTD 355

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
           E + +  LI S+Y+ FGF K  V+LSTRPE  +GSD  W  AE  +K  LD +       
Sbjct: 356 EIVGVVRLIDSVYQKFGF-KYHVELSTRPEDSMGSDEDWAAAEEGLKVALDKLG------ 408

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
           ++  V  G+GAFYGPK ++ L+D++GR WQCGT+Q+DF +P  F+  YV++  EK  P+M
Sbjct: 409 MDYVVNEGDGAFYGPKIDFHLEDSLGRTWQCGTVQLDFQMPQNFDLTYVDADGEKKRPIM 468

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSI 582
           +HR  FGSIERFIGI+IE++ G  P+WL+P+Q  V  ++  + +YA ++   L++  + +
Sbjct: 469 LHRVCFGSIERFIGILIEHYAGKFPVWLAPMQVKVLPVSEKSRDYAHQVTEQLEAAGIRV 528

Query: 583 ETDFRNETINYKIRE-HSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
             D R+E I YKIRE   + ++P ++I G+KE    +I +R   + T 
Sbjct: 529 VCDDRDEKIGYKIREARGVDRVPYMLILGEKEVEAGNISVRDRSNETV 576


>gi|320333471|ref|YP_004170182.1| threonyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
 gi|319754760|gb|ADV66517.1| threonyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
          Length = 649

 Score =  497 bits (1279), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 255/628 (40%), Positives = 384/628 (61%), Gaps = 27/628 (4%)

Query: 9   FPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPEDP 67
            PDG   +    AT  D A +I   LA+ A+A   NG + DL  P+ +G+ I +IT ++P
Sbjct: 5   LPDGKQLDLQQGATALDAARAIGPRLAQDALAATANGDLVDLMTPLPDGARITLITKKNP 64

Query: 68  -RSLAVIRHSCAHIMAEAVQSIW-------PEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
             + AV RHS  H+M++AV   +         V+  +GP IE+G+Y DFD  +P   ++L
Sbjct: 65  GEAAAVFRHSLGHVMSQAVGEFYRAKGHPADAVKRGVGPSIENGWYQDFDLPEPLREEDL 124

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IE+ M+EI++R+  F ++ +S  KA  L +   + YK E++  +P  E +T Y QG++
Sbjct: 125 PEIERIMREILSRNLDFSRREVS--KAEALAQFGGDPYKAELIRELPDDEPITFYTQGDY 182

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPH   TG +   FKLM  +GAYWRG+   P+L RIYG A+ TQ+EL +YL+ LE
Sbjct: 183 TDLCRGPHFPRTGALPGAFKLMSTSGAYWRGNEKNPILQRIYGVAFATQKELDEYLHRLE 242

Query: 240 ESEKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTP 297
           E++KRDHRKL RE++LF I    G G+  W   G  + + L  ++R ++    Y+ + TP
Sbjct: 243 EAKKRDHRKLGRELELFVIDPLVGKGLPMWLPNGTILREELTRFLREQQFARGYQGVVTP 302

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  L++ SGH+ +Y  + F+    DD       + LKPMNCP HV ++    +SYR+
Sbjct: 303 NIGNLELYKTSGHYQNYSDSNFSPITVDD-----EQYMLKPMNCPHHVRIYASKPRSYRD 357

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LPVRLAEFG+VYR E SG L+GL RVRGFTQDDAH+FC  +Q+  E L + +L + + + 
Sbjct: 358 LPVRLAEFGTVYRYEQSGELNGLTRVRGFTQDDAHLFCRPDQLKAEFLNVLDLTVLVLRT 417

Query: 418 FGFEKIMVKLSTR-PE--KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           FG   +  ++ TR PE  K VG++  W+ AE   + +++ ++      +   +  G+ AF
Sbjct: 418 FGMNDVRFRVGTRDPENTKYVGAEDNWNAAE---RQIIEAVEEVG---LPYSIEPGDAAF 471

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +++++D +GR+WQ GTIQVD+NLP RF+  YV        P+MIHRA FGS+ERF
Sbjct: 472 YGPKLDFVVRDVLGREWQLGTIQVDYNLPERFDISYVGEDGADHRPIMIHRAPFGSLERF 531

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
           +GI+IE++ G+ PLWL+P Q  +  I     EYA  +   L++  L  E D  +  +N K
Sbjct: 532 VGILIEHYGGDFPLWLAPRQVAIIPIADRHNEYAYALEAELRAAGLRTEVDDSSNRMNAK 591

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIR 622
           +R   + KIP+++I GDKE   R + +R
Sbjct: 592 VRAAELSKIPVMLIVGDKEQEGRQVSVR 619


>gi|311894878|dbj|BAJ27286.1| putative threonyl-tRNA synthetase [Kitasatospora setae KM-6054]
          Length = 659

 Score =  497 bits (1279), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 267/632 (42%), Positives = 377/632 (59%), Gaps = 47/632 (7%)

Query: 19  VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSC 77
           V  TG+  AE  +   A   +A  + G++ DL+  V +G  +E +    P  L ++RHS 
Sbjct: 18  VVTTGTTAAELFADDRA--VIAARVGGQLKDLAYAVLDGDEVEPVVISSPDGLDILRHST 75

Query: 78  AHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFL 137
           AH+MA+AVQ ++PE ++ IGP + DGFYYDFD E+PF  D+L  IEKKMQEII R   F 
Sbjct: 76  AHVMAQAVQQVFPEAKLGIGPPVRDGFYYDFDVERPFQPDDLKVIEKKMQEIIKRGQKFS 135

Query: 138 KQYLSHEKARELFESKKEAYKVEIL----ESIPAKEN---------VTLY-----RQGE- 178
           ++ ++ E ARE  E  KE YK+E++     +  A E          +T+Y     + GE 
Sbjct: 136 RRVVTDEAARE--ELAKEPYKLELIGLKGSAATAGEGADVEVGAGELTIYDNLDPKTGEL 193

Query: 179 -WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
            W DLCRGPH+ ST  +  F KLM+ A AYWRG    PML R+YGTAW T+ EL  +L F
Sbjct: 194 CWGDLCRGPHLPSTRHIPAF-KLMRSAAAYWRGSERNPMLQRLYGTAWPTKDELKAHLDF 252

Query: 238 LEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEIN 295
           LEE+ KRDHRKL  E+DLF I E  GSG+  +H KG  I +T+  Y R++ +++ YE + 
Sbjct: 253 LEEAAKRDHRKLGNELDLFSIPEQIGSGLAVFHPKGGIIRRTMEDYSRKRHEEEGYEFVY 312

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP      L++ SGH D Y   M+     D+ +     + LKPMNCP H  +F+   +SY
Sbjct: 313 TPHATKGKLFETSGHLDWYADGMYPPMQLDEGVD----YYLKPMNCPMHNLIFDARGRSY 368

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP+RL EFG+VYR E SG +HGL R RGFTQDDAH++CT+EQM +E  +    ++ + 
Sbjct: 369 RELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYCTREQMADELDRTLTFVLDLL 428

Query: 416 KDFGFEKIMVKLSTR-PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL----G 470
           +D+G     ++LST+ PEK VGSD  W++A  ++  V +            G+ L    G
Sbjct: 429 RDYGLNDFYLELSTKDPEKFVGSDDAWEEATAVLASVAE----------KQGLPLVPDPG 478

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
             AFYGPK     +DAIGR WQ  TIQ+DFNLP RF+  Y ++   +  PVMIHRA+FGS
Sbjct: 479 GAAFYGPKISVQARDAIGRTWQMSTIQLDFNLPERFDLEYTSADGSRQRPVMIHRALFGS 538

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
           IERF  +++E++ G +P WL+P+      IT   V Y  ++A  LK H + +E D  ++ 
Sbjct: 539 IERFFAVLLEHYAGAMPPWLAPVTVTGIPITDEHVPYLLDVAAELKKHGIRVEVDTSDDR 598

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           +  KIR     K+P ++I G+ +    ++  R
Sbjct: 599 MQKKIRNAQKTKVPFMLIAGNDDVEAGAVSFR 630


>gi|290961808|ref|YP_003492990.1| threonine-tRNA synthetase [Streptomyces scabiei 87.22]
 gi|260651334|emb|CBG74456.1| threonine-tRNA synthetase [Streptomyces scabiei 87.22]
          Length = 658

 Score =  497 bits (1279), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 270/669 (40%), Positives = 396/669 (59%), Gaps = 48/669 (7%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           SD+++     S +   V  TG+  A+  +    +  VA  + G++ DL+  VR+G ++E 
Sbjct: 2   SDVRVIIQRDSEREERVVTTGTTAADLFTGE--RTVVAARVAGELKDLAYEVRDGETVEP 59

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +       L ++RHS AH+MA+AVQ ++PE ++ IGP + DGFYYDFD E+PF+ ++L  
Sbjct: 60  VEISSEDGLNILRHSTAHVMAQAVQELFPEAKLGIGPPVRDGFYYDFDVEKPFTPEDLKA 119

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE-------------SIPAK 168
           +EKKMQEI  R   F ++ ++ E ARE  E   E YK+E++               + A 
Sbjct: 120 VEKKMQEIQRRGQRFSRRVVTDEAARE--ELADEPYKLELIGLKGSASSDDGADVEVGAG 177

Query: 169 ENVTLY-----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIY 221
           E +T+Y     + G+  W DLCRGPH+ +T  +  F KLM+ A AYWRG    PML RIY
Sbjct: 178 E-LTIYDNLDAKTGDLCWKDLCRGPHLPTTRNIPAF-KLMRNAAAYWRGSEKNPMLQRIY 235

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLI 280
           GTAW +++EL  +L FL E+EKRDHRKL  E+DLF I +  GSG+  +H KG  I + + 
Sbjct: 236 GTAWPSKEELKAHLDFLAEAEKRDHRKLGNELDLFSIPDQIGSGLAVFHPKGGIIRRVME 295

Query: 281 SYMRRKIKDD-YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPM 339
            Y RR+ +++ YE + TP      L++ SGH D Y   M+     D+ +     + LKPM
Sbjct: 296 DYSRRRHEEEGYEFVYTPHATKGKLFETSGHLDWYADGMYPPMQLDEGVD----YYLKPM 351

Query: 340 NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQ 399
           NCP H  +F+   +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDDAH++CTKEQ
Sbjct: 352 NCPMHNLIFDARGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYCTKEQ 411

Query: 400 MFNECLKIHNLIISIYKDFGFEKIMVKLSTR-PEKRVGSDALWDDAENIMKGVLDTIKNS 458
           M  E  K    ++++ +D+G     ++LST+ PEK VGSD +W+++   ++ V +     
Sbjct: 412 MAEELDKTLTFVLNLLRDYGLTDFYLELSTKDPEKFVGSDEIWEESTETLRQVAE----- 466

Query: 459 SQDRINTGVLL----GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH 514
                  G+LL    G  AFYGPK    +KDAIGR WQ  T+Q+DFNLP RF+  Y    
Sbjct: 467 -----KQGLLLVPDPGGAAFYGPKISVQVKDAIGRTWQMSTVQLDFNLPERFDLEYTGPD 521

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANL 574
             K  PVMIHRA+FGSIERF  +++E++ G  P WL+P+QA+   I  + VEY Q+ A  
Sbjct: 522 GSKQRPVMIHRALFGSIERFFAVLLEHYAGAFPAWLAPVQAVGIPIGDAHVEYLQKFAAE 581

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
            K   L ++ D  ++ +  KIR     K+P ++I GD++ +  ++  R    +    + +
Sbjct: 582 AKRKGLRVDVDASSDRMQKKIRNAQKAKVPFMVIAGDEDMAAGAVSFRYRDGSQENGIPV 641

Query: 635 LDAIPILTK 643
            +AI  + K
Sbjct: 642 EEAIAKIAK 650


>gi|282881717|ref|ZP_06290380.1| threonine--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
 gi|281304476|gb|EFA96573.1| threonine--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
          Length = 655

 Score =  496 bits (1278), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 249/633 (39%), Positives = 392/633 (61%), Gaps = 23/633 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           +K+TFPDGS++ +    TG  +AESIS +LA+  V+  +NG+  +L+ P+  + +I +  
Sbjct: 2   VKITFPDGSVREYEQGVTGLQIAESISPALARNVVSCGVNGETVELNRPINNDATIALYK 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ--PFSSDELAQ 121
            ED        H+ AH++AEA+Q ++P +Q   GP IE+GF+YD   ++    S  +  +
Sbjct: 62  FEDEEGKHTFWHTSAHLLAEALQELYPGIQFGFGPAIENGFFYDVMPKEGTTISETDFPK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE KM E+  ++ P +++ +S   A + F+   + YK E ++       ++ Y QG + D
Sbjct: 122 IEAKMMELAKKNEPVVRRNISKADALKEFQEDGQDYKCEHIDQDLEDGTISTYTQGHFTD 181

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ STG +K   K+  VAGA+WRGD+ R  ++RIYG  +  ++ L +YL  LEE+
Sbjct: 182 LCRGPHLLSTGLIKAV-KITSVAGAFWRGDAKREQMTRIYGITFPKKKMLDEYLTMLEEA 240

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKI---FQTLISYMRRKIKDDYEEINTP 297
           +KRDHRK+ +EM+LF  +E  G G+  W  KG ++    Q ++  ++R+    Y+E+ TP
Sbjct: 241 KKRDHRKIGKEMELFMFSERVGKGLPIWLPKGTELRLRLQDMLRNIQRRY--GYQEVITP 298

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +  ++L+  SGH+  Y  + F       T ++   + LKPMNCP H  VF +  +SY++
Sbjct: 299 HIGSKNLYVTSGHYAHYGKDSFQ---PIHTPEEDEEYMLKPMNCPHHCEVFAYKPRSYKD 355

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFG+VYR E SG LHGL RVR FTQDDAH+FC  +Q+ NE L++ ++I +++K 
Sbjct: 356 LPLRIAEFGTVYRYEKSGELHGLTRVRSFTQDDAHIFCRPDQVKNEFLRVMDIIQAVFKI 415

Query: 418 FGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           F F+    ++S R     EK +GSD +W ++E   + ++D  K      ++  V  GE A
Sbjct: 416 FNFDNFEAQISLRDPKDKEKYIGSDEVWAESE---QAIIDACKEKG---LDAKVEYGEAA 469

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK ++++KDAIGR WQ GTIQVD+NLP RF   Y +  + K  PVM+HRA FGS+ER
Sbjct: 470 FYGPKLDFMVKDAIGRRWQLGTIQVDYNLPQRFKLEYTDEDNSKRTPVMVHRAPFGSLER 529

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           F  ++IE+  G+ PLWL+P Q  +  I+     YA+++A    +  +    D RNE I  
Sbjct: 530 FTAVLIEHTAGHFPLWLTPDQVAILPISEKYNAYARQVAKQFAAQQVRATIDDRNEKIGR 589

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGS 626
           KIR++ +K++P ++I G+KEA++  + +R  G 
Sbjct: 590 KIRDNELKRVPYMVIVGEKEAADGLVSMRERGG 622


>gi|156934293|ref|YP_001438208.1| hypothetical protein ESA_02124 [Cronobacter sakazakii ATCC BAA-894]
 gi|156532547|gb|ABU77373.1| hypothetical protein ESA_02124 [Cronobacter sakazakii ATCC BAA-894]
          Length = 453

 Score =  496 bits (1278), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 225/448 (50%), Positives = 313/448 (69%), Gaps = 13/448 (2%)

Query: 198 FKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFH 257
           FKLMK AGAYWRGDS+  ML RIYGTAW  ++ L  YL  LEE+ KRDHRK+ +++DL+H
Sbjct: 7   FKLMKTAGAYWRGDSSNKMLQRIYGTAWADKKALNAYLQRLEEAAKRDHRKIGKQLDLYH 66

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRA 316
           + E+  G++FWH  GW IF+ L +++R K+K+  Y+E+  P ++D+ LW+++GHWD+Y+ 
Sbjct: 67  MQEEAPGMVFWHNDGWTIFRELETFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKD 126

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+AEFGS +RNEPSG+
Sbjct: 127 AMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGA 180

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
           LHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  FGFEKI+VKLSTRPEKR+G
Sbjct: 181 LHGLMRVRGFTQDDAHIFCTEEQVRDEVNSCIRMVYDMYSTFGFEKIVVKLSTRPEKRIG 240

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
           +D +WD AE  +   L+      ++ I      GEGAFYGPK E+ L D + R WQCGT+
Sbjct: 241 TDEMWDRAEADLAVALE------ENNIPFEYQPGEGAFYGPKIEFTLYDCLDRAWQCGTV 294

Query: 497 QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI 556
           Q+DF+LPSR +A YV  ++E+  PVMIHRA+ GS+ERFIGI+ E F G  P WL+P+Q +
Sbjct: 295 QLDFSLPSRLSASYVGENNERQVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVV 354

Query: 557 VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASE 616
           V  IT S  EY  E+   L++  + ++ D RNE I +KIREH+++++P +++CGDKE   
Sbjct: 355 VMNITDSQSEYVNELTRKLQNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVEA 414

Query: 617 RSIGIRRFGSTTTQKVSLLDAIPILTKE 644
             + +R         + + D I  L +E
Sbjct: 415 GKVAVRTRRGKDLGSLDVNDVIEKLQQE 442


>gi|322437350|ref|YP_004219562.1| threonyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9]
 gi|321165077|gb|ADW70782.1| threonyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9]
          Length = 687

 Score =  496 bits (1278), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 269/665 (40%), Positives = 384/665 (57%), Gaps = 54/665 (8%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKA--------VAVAING--------- 45
           S I++  PDGSI+  P   T  ++A SIS  LA             + IN          
Sbjct: 8   STIRVQLPDGSIREVPSGTTPLEIATSISPRLAAVVVVAKVKPMAGLDINQSEGGQDDAP 67

Query: 46  ------------------KVCDLSDPVREG-SIEIITPEDPRSLAVIRHSCAHIMAEAVQ 86
                             ++ DL+ P+ E   + ++  +D  SL V+RHS AH+MA A+ 
Sbjct: 68  DAGSEEAMYDAALSPSAERIIDLAMPLAEDVELWLLKEQDEESLKVLRHSTAHVMATAIL 127

Query: 87  SIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKA 146
            ++PE ++  GP  + GF+YD  +E PF+ D+LA IEK+M E++AR+  F+K+    E A
Sbjct: 128 ELFPETKLGHGPATDAGFFYDVYRETPFTEDDLAAIEKRMGEVVARNDAFVKETEPREDA 187

Query: 147 RELFESKKEAYKVEILESIP-AKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAG 205
            + + ++ E  KV  +E    A E V+LYR G + D CRGPHV STG+VK F K+  VAG
Sbjct: 188 LQEYAAEGEFMKVHFIERFTQAGEPVSLYRNGGFTDFCRGPHVPSTGRVKAF-KVTSVAG 246

Query: 206 AYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAE-DGSG 264
           AYW GD     L RIYGTA+   +++  +   LEE + RDHR L +++DLF I E  G+G
Sbjct: 247 AYWLGDEKNQQLQRIYGTAFFNAKDMDAHFKRLEEIKARDHRVLGKQLDLFSIQEVAGAG 306

Query: 265 VIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKC 323
           +IFWH KG  I + +  +MR   IK  YE + TP ++ + LW+ SGH ++Y  NM+    
Sbjct: 307 LIFWHPKGGLIRKAMEDWMREDCIKRGYEMVFTPHIMRRELWKISGHEENYGENMYPPME 366

Query: 324 ADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRV 383
            DD       + LKPMNCPGH+ ++ +  KSYR+LPVR AE G+VYR E SG++HGL+RV
Sbjct: 367 LDDA-----EYRLKPMNCPGHILIYKNSPKSYRDLPVRYAELGNVYRYERSGTMHGLLRV 421

Query: 384 RGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST---RPEKRVGSDAL 440
           RGFTQDDAH+FCT  Q+ +E         S+   FGF +  V+LST     +K +GS   
Sbjct: 422 RGFTQDDAHIFCTPGQIEDEVTACIEFAESVLNTFGFHEFKVELSTWDPNDKKFIGSAEQ 481

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDF 500
           W  A   ++  L+      +  I    + GE AFYGPK +  L D +GR WQ  T+Q D+
Sbjct: 482 WGVAVGSLRNALE------RKGIPYKTIPGEAAFYGPKIDIKLVDVLGRMWQLSTVQFDW 535

Query: 501 NLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTI 560
           NLP+RF+  Y     E   PVM+HRA+FGS+ERF G++IE++ G  P WL+P+Q  +  I
Sbjct: 536 NLPARFDLHYKGEDGELHQPVMVHRALFGSVERFFGVLIEHYAGAFPFWLAPVQVGLVPI 595

Query: 561 TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
           +   +EYA+ +   LK   + +E D RNE +N KIRE  + K+P I+I GDKE+    + 
Sbjct: 596 SEKHLEYARTVQQRLKDAGVRVELDERNEKMNAKIREFGVNKVPFILIMGDKESQSDEVS 655

Query: 621 IRRFG 625
           +R  G
Sbjct: 656 VRTRG 660


>gi|297620271|ref|YP_003708408.1| Threonyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044]
 gi|297375572|gb|ADI37402.1| Threonyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044]
          Length = 642

 Score =  496 bits (1278), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 262/651 (40%), Positives = 391/651 (60%), Gaps = 35/651 (5%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIEIITP 64
           +K+T  D S    P  ++  D+A  ++    ++A+AV INGK  DL+ P+ +G + +   
Sbjct: 1   MKITLRDNSTIETPNGSSAKDLANQLNLKGPEQALAVNINGKNVDLATPLNDGDLVVFWS 60

Query: 65  EDPR-SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            D R    +  H+ AH++A+AV  I+P+ +  IGP IE GFYYDF  +   S ++  +IE
Sbjct: 61  FDDREGKEIFWHTSAHVLAQAVLRIYPDAKPTIGPPIETGFYYDF-ADLSISENDFEKIE 119

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEA--------YKVEILESIPAKENVTLYR 175
            +M++I+  +         ++  RE+F +K EA        YK E+++    +E ++ YR
Sbjct: 120 NEMKKIVKEN---------YQSEREVFNTKNEAKSSFASNPYKCEMIDGFSEEEELSGYR 170

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
           QGE+FDLCRGPH+ + G++K F KL K +GAYWRG+S   ML+RIYG ++  +  L +YL
Sbjct: 171 QGEFFDLCRGPHLPNLGKIKAF-KLTKTSGAYWRGNSENEMLTRIYGVSFPDRALLKEYL 229

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEI 294
           + +EE++KRDHR +  ++DLF   E+ +G+ F H KG  ++  L +Y+R  +   +Y EI
Sbjct: 230 HQMEEAKKRDHRVIGSKLDLFSFKEEAAGMPFIHPKGMTVWTELTNYLRECLGSANYVEI 289

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
            TP +L + LW+ SGHW +YR NMF  +  D        +A+KPMNCPG +  +   + S
Sbjct: 290 KTPIMLSRGLWETSGHWFNYRENMFTSEIED------HDYAIKPMNCPGCMLYYKSHVHS 343

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YRELP+R+AE G+V+R EPSG+L GL RVR F QDDAH+F     +  E L + NL   +
Sbjct: 344 YRELPLRVAEIGNVHRYEPSGALSGLFRVRSFHQDDAHIFMKPSDIEGEILSLLNLFEKL 403

Query: 415 YKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           Y  FG     ++LSTRPEK  +G+D  W+ A   +K  LD  K     +IN G    +GA
Sbjct: 404 YSTFGL-SYHLELSTRPEKGTIGTDEEWEQATAGLKNALD--KWGHDYKINEG----DGA 456

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK ++ ++DAI R WQCGTIQ+D  LP RF   Y  S  E+  PVM+HRA+FGSIER
Sbjct: 457 FYGPKIDFHIRDAINRTWQCGTIQLDMALPQRFALEYTASDGERHRPVMLHRAIFGSIER 516

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           F+GI+IE+F G  PLW+SP+QA + T+      YA E+   LK     ++ D   E+++ 
Sbjct: 517 FMGILIEHFAGKFPLWISPLQARILTVADRHEPYAHELMQKLKQQGFRVDIDATGESVSK 576

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K+R   + +I  I+  GDKE   +++ +R   +    ++ L   I  L KE
Sbjct: 577 KVRTAQLTQINYILTVGDKEMEHKTLNLRTRDNVVHGEIDLEAFIIALKKE 627


>gi|113954220|ref|YP_731070.1| threonyl-tRNA synthetase [Synechococcus sp. CC9311]
 gi|123031674|sp|Q0I902|SYT_SYNS3 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|113881571|gb|ABI46529.1| threonyl-tRNA synthetase [Synechococcus sp. CC9311]
          Length = 617

 Score =  496 bits (1277), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 256/569 (44%), Positives = 356/569 (62%), Gaps = 21/569 (3%)

Query: 61  IITPEDPRS--LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           ++ P+   S  L  IRHS +H+MA AVQ ++P+ QV IGP  E GFYYDFD  +PF+  +
Sbjct: 23  VVLPKTSESENLLKIRHSMSHVMAMAVQKLFPKAQVTIGPWTEAGFYYDFDNPEPFTEAD 82

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L  I+K+M +II R  P  +  +S E+A    +++ E YK+EILE +   E +TLY  GE
Sbjct: 83  LKAIKKEMGKIIGRKLPLERIEVSREEAERRIKAQNEPYKLEILERL--VEPITLYTLGE 140

Query: 179 -WFDLCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
            W+DLC GPHV +T ++  K F+L  VAGAYWRGD  +  L RIYGTAW T  +L+++  
Sbjct: 141 QWWDLCAGPHVANTSELNPKAFELESVAGAYWRGDETKAQLQRIYGTAWETADQLSEHKR 200

Query: 237 FLEESEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEI 294
             EE+ +RDHR+L +++DLF I  E G+G++FWH +G ++   +  + R+   +  YE +
Sbjct: 201 RKEEALRRDHRRLGKDLDLFSIEDEAGAGLVFWHPRGARMRLLIEDFWRQAHFEGGYELL 260

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
            TP V D  LW+ SGH D Y  +MF     D+     R + LKPMNCP HV  +   L+S
Sbjct: 261 YTPHVADISLWKTSGHLDFYAESMFGPMEVDE-----RQYQLKPMNCPFHVLTYASKLRS 315

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YRELP+R AE G+VYR E  G +HGLMRVRGFTQDDAHVFC  EQ+ +E L+I NL   I
Sbjct: 316 YRELPIRWAELGTVYRYERPGVMHGLMRVRGFTQDDAHVFCLPEQISDEILRILNLTERI 375

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD-RINTGVLLGEGA 473
              F F    + LST+P+K +G DA+W+ A    KG+++ +K      +I+ G     GA
Sbjct: 376 LSTFDFSNYEINLSTKPDKAIGDDAVWELA---TKGLIEALKRKGWAYKIDEG----GGA 428

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  ++DAIGR WQC TIQ+DFNLP RF   Y+ +   K  P+MIHRA+FGS+ER
Sbjct: 429 FYGPKIDLKIEDAIGRMWQCSTIQLDFNLPERFELDYIAADGSKQRPIMIHRAIFGSLER 488

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           F GIM EN+ G+ P WL+P Q  +  +T   + YA+E  N LK+  +    D   + +  
Sbjct: 489 FFGIMTENYAGDFPFWLAPEQIRLLPVTDEVLGYAEEFQNQLKAAGIRASIDRSGDRLGK 548

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIR 622
            IR     KIP++ + G KEA + +  +R
Sbjct: 549 LIRIGEKMKIPVLAVIGAKEAEQGAASLR 577


>gi|326803832|ref|YP_004321650.1| threonine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
 gi|326651446|gb|AEA01629.1| threonine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
          Length = 651

 Score =  496 bits (1277), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 254/655 (38%), Positives = 405/655 (61%), Gaps = 28/655 (4%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           I+LTFPD S+K F    +G DVA+SIS SLAK+ VA  +N ++  L + +  +GSI +I 
Sbjct: 2   IQLTFPDQSVKEFEAGVSGRDVAKSISNSLAKRVVAYTLNDELKGLDEAIESDGSIRLID 61

Query: 64  PEDPRS----LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD--KEQPFSSD 117
           P++  +    L ++RHS AH++A+A++ ++P+++  +GP IE+GFYYD D  + Q  S +
Sbjct: 62  PKNKETEQEALDILRHSSAHLLAQALRRLYPDIKFGVGPAIENGFYYDTDNGQGQQVSEE 121

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +L ++E +M++I+  D P + + +S E+A+E+F  K + YK+EI+  +P    +T Y QG
Sbjct: 122 DLPRVEAEMEKIVKEDYPVVGKEVSREEAKEIF--KNDPYKLEIIADLPEDATLTTYSQG 179

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           E+ DLCRG HV STG +K F KL+ +AGAYWRG+S+  M+ R+YGT++  +++L + L  
Sbjct: 180 EFTDLCRGGHVPSTGYIKHF-KLLSLAGAYWRGNSDNAMMQRVYGTSYFNEKDLKEDLKR 238

Query: 238 LEESEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEIN 295
            EE+++RDHRK+ +E+DLF I  + G G+ FW   G  I + +  Y+  ++++  Y+ + 
Sbjct: 239 REEAKERDHRKIGKELDLFMIDPKTGQGLPFWLPNGATIRRQVERYIVDKEVQAGYQHVY 298

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP + D  L++ SGHWD Y  +MF         +D  +F L+PMNCP H+ V+ + + SY
Sbjct: 299 TPIMADVDLYKTSGHWDHYSDDMFPTM----DFEDGESFVLRPMNCPHHIRVYQNKVHSY 354

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP+R+AE G ++R E SG+L GL RVR  T +D+H+F   +Q+ +E   I   +   Y
Sbjct: 355 RELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDSHIFVRLDQIKDEFKSILRFMQDAY 414

Query: 416 KDFGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
            DF       +LS R     +K    D +W+ A++++K  +D +       ++     GE
Sbjct: 415 HDFNITDYRYRLSYRDPKDTKKYFDDDEMWEKAQSMLKEAMDELG------LDYFEAEGE 468

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH-PVMIHRAVFGS 530
            AFYGPK +  +K A+G +    TIQ+DF LP +F+  YV    +  H PVMIHR +  +
Sbjct: 469 AAFYGPKLDVQVKTALGNEETLSTIQLDFLLPEKFDVTYVGEDGQNTHRPVMIHRGIVST 528

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNE 589
           +ERF+  +IE +KG  P WL+P QAI+  +  +   +Y  ++AN ++S  L IE D RNE
Sbjct: 529 MERFVAYLIEEYKGAFPTWLAPQQAILIPVNENQHADYVYQVANRMRSEGLRIEVDDRNE 588

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            + YKIRE   +K+P  ++ GD E    ++ +RR+GS  T+ V L + I ++  E
Sbjct: 589 KMGYKIREAQTRKVPYQLVFGDNEIENGTVTVRRYGSKKTETVDLDEFINMIHAE 643


>gi|293376470|ref|ZP_06622699.1| threonine--tRNA ligase [Turicibacter sanguinis PC909]
 gi|325842051|ref|ZP_08167588.1| threonine--tRNA ligase [Turicibacter sp. HGF1]
 gi|292644892|gb|EFF62973.1| threonine--tRNA ligase [Turicibacter sanguinis PC909]
 gi|325489773|gb|EGC92129.1| threonine--tRNA ligase [Turicibacter sp. HGF1]
          Length = 645

 Score =  496 bits (1276), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 268/648 (41%), Positives = 389/648 (60%), Gaps = 22/648 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           I +TFPDG++K F    T   +A SIS  L KK VA  ING + DL+ P+  +  IE+IT
Sbjct: 2   INITFPDGNVKQFENGVTADAIAHSISPGLRKKCVAAKINGHLYDLTRPIEADAKIELIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            + P +  +I HS AH+MA A++ ++P+ +  +GP IEDGFYYD D E   S  +L  IE
Sbjct: 62  NDRPEAWEIINHSAAHLMAAAIKRLYPDAKFGVGPAIEDGFYYDIDTESKISEADLPAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K MQ+I +   P ++Q LS E+A+ELF +  + YK+E++++I   E +T Y +G++ DLC
Sbjct: 122 KMMQKISSEALPIIRQELSREEAKELFAA--DEYKLELIDAIKEGEIITTYSEGDFTDLC 179

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            G HV +T  VK FFKL+ VAGAYWRGDS+  ML+RIYG A  ++  L  +L  LEE ++
Sbjct: 180 SGVHVPNTKDVK-FFKLLSVAGAYWRGDSDNKMLTRIYGAAALSKDALADHLRILEERKE 238

Query: 244 RDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           RDH+KL RE++LF  +   G G+  W   G K+ Q +  Y+    +D  Y+ + TP +  
Sbjct: 239 RDHKKLGRELELFTFSPLVGQGLPIWLPNGMKVRQQIERYITELEEDYGYQHVATPVMGS 298

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             L++ SGHW  Y+ +MF     D+         L+PM+CP H+ V+   L+SYR+LP+R
Sbjct: 299 VDLYRTSGHWAHYQEDMFVPMEMDN-----EELVLRPMSCPHHMMVYKTKLRSYRDLPIR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
            AE    +R E SG+L GL RVR  T  D+H+F   +Q+  E  +   LI  + KDFG E
Sbjct: 354 YAEQVIQHRFEASGALTGLERVRAMTLTDSHLFVRPDQIKEEFSRCLELIHRVIKDFGVE 413

Query: 422 KIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
               +LS R     EK    D +W++AE++++  L  I+N+    I      GE AFYGP
Sbjct: 414 INYYRLSLRDPENKEKYFDDDQMWENAESMLRETL--IENN----IPFIEAEGEAAFYGP 467

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  +K A+G D    TIQ+DF LP RF+  YV+   EK  PV++HR + G+ ERF+  
Sbjct: 468 KLDIQIKTALGHDITMSTIQLDFLLPERFDLTYVSETGEKVRPVVMHRGLIGTYERFMAY 527

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +IE +KG  PLWL+P Q  V  + +   +EYA+E+A  L+ + + +E D R E + YKIR
Sbjct: 528 LIETYKGAFPLWLAPTQVTVIPVNNQYHLEYAKEVAKELRKYRVRLEIDEREEKMGYKIR 587

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           E   KKIP+ I+ GDKE +   +  RRFG   TQ + L + +  L +E
Sbjct: 588 ESQTKKIPMSIVLGDKEVANNEVTFRRFGEQKTQTLPLKEFVHFLVEE 635


>gi|119358269|ref|YP_912913.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Chlorobium
           phaeobacteroides DSM 266]
 gi|119355618|gb|ABL66489.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Chlorobium
           phaeobacteroides DSM 266]
          Length = 675

 Score =  496 bits (1276), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 255/628 (40%), Positives = 388/628 (61%), Gaps = 16/628 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           I +T PDGSI++FP  +TG D+A SI R LA+ A+A+   GK  +L  P+ E G +EI+T
Sbjct: 26  IAITLPDGSIRSFPYGSTGLDIALSIGRKLAQDALAITFEGKALELDTPLTESGHMEILT 85

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            + P    +  HS +H+MA+A++ ++   +   GP IE GFYYD   +  F  ++L  IE
Sbjct: 86  FDSPEGKEIFWHSSSHLMAQAIEELFAGTRFGAGPAIEQGFYYDIASDHRFREEDLRAIE 145

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFES-KKEAYKVEILE-SIPAKENVTLYRQGEWFD 181
            +M EI  R+S   ++ +S E+A E F++ + + YKVEILE ++     V+LY Q  + D
Sbjct: 146 LRMIEISKRESQINRREMSREEAIEFFKTVRNDPYKVEILEDTLKNTPVVSLYEQENFTD 205

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LC GPH+ ST ++K   +L  ++ +YWRGDS+R  + RIYG  + +++ L ++   +EE+
Sbjct: 206 LCSGPHLHSTSKIKAV-QLTNISTSYWRGDSSRESMQRIYGITFPSEKLLKEHTARVEEA 264

Query: 242 EKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           ++RDHRKL  E++LF ++ E GSG+  W  KG  I   L ++++  + K  Y  + TP +
Sbjct: 265 KRRDHRKLGAELELFMLSPEIGSGLPVWLPKGAIIRNELETFLKEEQRKRGYLPVYTPHI 324

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +  L+++SGH+  Y  + F      D       + LKPMNCP H  ++N  L+SYR+LP
Sbjct: 325 GNIELYKRSGHYPYYSDSQFPPLTYHDENGKQEQYLLKPMNCPHHHLIYNVKLRSYRDLP 384

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +RLAEFG+VYR+E SG L+GL+R RGFTQDD+H++C  +Q+ +E     +L   ++   G
Sbjct: 385 IRLAEFGTVYRHEQSGELNGLVRARGFTQDDSHIYCRPDQLVDEICNAIDLTQHVFATLG 444

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           F  +  +LS       EK  G+  +W+ AE       D  + +++  IN  + +GE +FY
Sbjct: 445 FSDVQTRLSMHDPLNQEKYGGTPEVWEQAEK------DVTEAANRMGINYVIGIGEASFY 498

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++I++DAIGR WQ GT+QVD+ +P RF+  Y+ S S+K  P++IHRA FGS+ERFI
Sbjct: 499 GPKIDFIVRDAIGRKWQLGTVQVDYVMPERFDLSYIGSDSQKHRPIVIHRAPFGSMERFI 558

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
           G++IE+  GN PLWL+P+QAI+  +      YA+ I   L    +  E D RNE I  KI
Sbjct: 559 GVLIEHTAGNFPLWLAPVQAIIMPLGEEIHAYAKSIHEKLLHSGIRAELDLRNEKIGKKI 618

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRR 623
           RE  I K+P +II G KE     + +RR
Sbjct: 619 REAEIGKLPYMIIIGQKELESGQLSLRR 646


>gi|269925242|ref|YP_003321865.1| threonyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
 gi|269788902|gb|ACZ41043.1| threonyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
          Length = 596

 Score =  496 bits (1276), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 230/578 (39%), Positives = 372/578 (64%), Gaps = 19/578 (3%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           L+ +RHS AH+MA AV  ++P+ +  IGP IE+GFYYDF+  +P + ++  +IE++M+++
Sbjct: 24  LSTMRHSAAHVMAAAVLQMFPDAKFGIGPAIENGFYYDFELPRPITPEDFPEIEERMRQL 83

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
           I  D PF+++ +S ++A+E+F  + + YK+EI++ +P    +++Y+   + DLCRGPHV 
Sbjct: 84  IEEDHPFIREEISRQQAKEMF--RDQPYKLEIIDDLPEDAVISIYKMAHFTDLCRGPHVE 141

Query: 190 STGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKL 249
           STG++  F KL+ VA AYWRGD  RP L RIYGTA+ TQ+EL  YL+ LEE+++RDHRK+
Sbjct: 142 STGKIGPF-KLLSVASAYWRGDEKRPQLQRIYGTAFPTQEELDDYLWRLEEAKRRDHRKI 200

Query: 250 AREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQ 307
            R+++LF I+++ G G++ W   G  I + L +++ + + ++ Y+ + TP +    L++ 
Sbjct: 201 GRDLELFMISDEVGPGLVLWLPNGSIIRRELENFIVKAEAREGYQHVYTPHIAKLGLYKT 260

Query: 308 SGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGS 367
           SGHW  YR  MF        ++D   + L+PM CP H+ ++ H L+SYR+LP+R+AE G+
Sbjct: 261 SGHWQHYRDAMFPPMV----LEDGEEYELRPMTCPHHIMIYKHSLRSYRDLPLRIAELGT 316

Query: 368 VYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKL 427
           VYR E SG L G+ RVRGFT +DAH+FC  +Q+  E +++  L+  +Y+  GF   + +L
Sbjct: 317 VYRYEKSGELTGMSRVRGFTINDAHIFCRPDQLKEEFIRVIQLMHEVYRAVGFHDYVYRL 376

Query: 428 STR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           S R     EK V  D +W++AEN ++  LD +     D +      GE AFYGPK + ++
Sbjct: 377 SLRDPSDKEKYVEGDEMWNNAENAIRQALDEL---GADYVEAE---GEAAFYGPKLDVMV 430

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D +GR++   T Q+DF LP RF+  Y+++  E+  PVMIHRA  GS+ERF   + E   
Sbjct: 431 RDVLGREFAASTNQLDFYLPERFDLEYIDADGERRRPVMIHRAPIGSMERFFAFLTEQHA 490

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P+WLSP+Q +V  I    + YA+E+A+    H++ +  D RNE +N KIR+  ++KI
Sbjct: 491 GAFPVWLSPVQVVVIPIADRHIPYAEEVASAFSRHNVRVNVDARNERMNAKIRDAQMQKI 550

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           P ++I GD+EA   ++ +R+      +   + D + ++
Sbjct: 551 PYMLIVGDREAQAGTVAVRKRSGEDLKGQPVQDVVQMV 588


>gi|194335337|ref|YP_002017131.1| threonyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1]
 gi|238693365|sp|B4SB93|SYT_PELPB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|194307814|gb|ACF42514.1| threonyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1]
          Length = 657

 Score =  496 bits (1276), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 254/628 (40%), Positives = 388/628 (61%), Gaps = 16/628 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           I LT PDGS+K FP+  TG+DVA SI R LA+ A+A+ +NG   DLS P+  + +IEIIT
Sbjct: 11  IALTLPDGSVKTFPIGTTGNDVALSIGRKLAQDALALRVNGVAIDLSTPLTADAAIEIIT 70

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
              P    +  HS +H+MA+A++ ++P  +   GP IE GFYYD      F  ++L +IE
Sbjct: 71  FSSPAGQDIFWHSSSHLMAQAIEELYPGSKFGAGPSIEQGFYYDVASTHRFREEDLRKIE 130

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFES-KKEAYKVEILE-SIPAKENVTLYRQGEWFD 181
           ++M EI  RD    ++ +S   A E F++ + + YKVEILE ++   E V+LY Q  + D
Sbjct: 131 ERMLEISKRDIQIRREEMSRTDAIEFFKTVRNDPYKVEILEDTLKEVERVSLYHQDGFTD 190

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LC GPH+ ST +VK    L  ++ +YWRGDS R  + RIYG  + +++ L +++  LEE+
Sbjct: 191 LCIGPHIPSTSKVKAVL-LSNISSSYWRGDSARENMQRIYGITFPSEKLLKEHVARLEEA 249

Query: 242 EKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           ++RDHRKL  E++LF ++ E GSG+  W  KG  I   L ++++  + K  Y  + TP +
Sbjct: 250 KRRDHRKLGAELELFMLSPEVGSGLPIWLPKGAIIRNELETFLKEEQRKRGYLPVYTPHI 309

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +  L+++SGH+  Y  + F      D       + LKPMNCP H  +++  ++SYR+LP
Sbjct: 310 GNIELYKRSGHYPYYSDSQFPPLTYHDEEGKQEQYLLKPMNCPHHHLIYSSKMRSYRDLP 369

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +RL EFG+VYR+E SG L+GL+R RGFTQDD+H++C  +Q+ +E      L   ++   G
Sbjct: 370 LRLTEFGTVYRHEQSGELNGLVRARGFTQDDSHIYCRPDQLVDEICSAIELTQFVFGTLG 429

Query: 420 FEKIMVKLSTR-PEKRV---GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           F ++  +LS   PE +    G+  +W+ AE  ++   D +       I+  + +GE +FY
Sbjct: 430 FSEVQTRLSMHDPENQAKYGGTAEVWEQAEKDVQEAADRMG------IDYFIGVGEASFY 483

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++I++DA+GR WQ GT+QVD+ +P RF+  Y  S  +K  PV+IHRA FGS+ERFI
Sbjct: 484 GPKIDFIVRDALGRKWQLGTVQVDYVMPERFDLTYTGSDGQKHRPVVIHRAPFGSMERFI 543

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
           G++IE+  GN PLWL+P+QA+V  I    ++YA+ +   L +  +  E D R+E I  KI
Sbjct: 544 GVLIEHTAGNFPLWLAPVQAVVLPIAEDVLDYAKSVHQALLAAGIRAELDTRSEKIGKKI 603

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRR 623
           R+  + KIP +I+ G KE     + +RR
Sbjct: 604 RDAEVSKIPCMIVIGQKEQESGEVSLRR 631


>gi|82524022|emb|CAI78700.1| Threonyl-tRNA synthetase [uncultured Flavobacteriaceae bacterium]
          Length = 644

 Score =  495 bits (1275), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 262/638 (41%), Positives = 388/638 (60%), Gaps = 21/638 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           I +T PDGS+K F  +AT  DVA+SIS   A+  ++ + NG   +   P+   GS+ + T
Sbjct: 2   IHITLPDGSVKPFEKNATPMDVAKSISEGFARNVISASFNGTTIETVTPLTANGSLVLYT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQI 122
             +        HS AH++A+A++ ++P +++ IGP IE+GFYYD D  E   S  +   I
Sbjct: 62  WNNDEGKKAFWHSSAHVLAQALEELYPGIKLTIGPAIENGFYYDVDFGEHTVSEKDFKTI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E K+ EI      F  + +S ++A  L+  K   +K E++E++     +T      + DL
Sbjct: 122 EDKIIEIARGKHTFKMRAVSKKEALSLY--KDNTFKTELIENL-EDGTITFCDHSTFTDL 178

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRG H+  TG +K   K++ VAGAYWRG+   P L+R+YG ++  Q+ELT YL  LEE++
Sbjct: 179 CRGGHIPDTGIIKAV-KILSVAGAYWRGNEKNPQLTRVYGISFPKQKELTDYLNLLEEAK 237

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           KRDHRKL +E++LF  ++  G G+  W  KG  + + L  ++++ + K  YE + TP + 
Sbjct: 238 KRDHRKLGKELELFAFSKKVGQGLPLWLPKGAALRERLEDFLKKAQKKAGYEMVVTPHIG 297

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            + L+  SGH+  Y A+ F       T K+   F LKPMNCP H  ++N+   SY++LP 
Sbjct: 298 QKELYVTSGHYAKYGADSFQ---PIKTPKEDEEFLLKPMNCPHHCEIYNNSQWSYKDLPK 354

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R AEFG+VYR E SG LHGL RVRGFTQDDAH+FC  EQ+  E   + +L++ ++   GF
Sbjct: 355 RYAEFGTVYRYEQSGELHGLTRVRGFTQDDAHLFCMPEQLDQEFKNVIDLVLYVFGSLGF 414

Query: 421 EKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           E    ++S R    P+K +G    W+ AE   + +++  K+   D +   ++ GE AFYG
Sbjct: 415 ENFTAQVSVRDPENPDKYIGEVENWEKAE---QAIINAAKDKGLDFV---IVEGEAAFYG 468

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK ++++KDA+GR WQ GTIQVD+NLP RF+  Y  S +E   PVMIHRA FGSIERFI 
Sbjct: 469 PKLDFMVKDALGRKWQLGTIQVDYNLPERFDLTYKGSDNELHRPVMIHRAPFGSIERFIA 528

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           I++E+  GN PLWL P QAI+  I+    +YA+++ NLL+++ +    D RNETI  KIR
Sbjct: 529 ILLEHTAGNFPLWLMPKQAIILCISEKYEKYAEKVLNLLENNEIRALVDNRNETIGKKIR 588

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           E  ++K P +II G+ E SE  I +R+ G      +S+
Sbjct: 589 EAEMQKYPYMIIIGENEESENKISVRQHGGEDLGLISI 626


>gi|78189671|ref|YP_380009.1| threonyl-tRNA synthetase [Chlorobium chlorochromatii CaD3]
 gi|123729828|sp|Q3APV9|SYT_CHLCH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|78171870|gb|ABB28966.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Chlorobium
           chlorochromatii CaD3]
          Length = 657

 Score =  495 bits (1275), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 258/649 (39%), Positives = 392/649 (60%), Gaps = 16/649 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           I LT PD S++N  + +TG DVA SI R LA+ A+A+ +NG VCDL+  +  + +IEIIT
Sbjct: 11  IALTLPDRSVRNVAMGSTGYDVALSIGRKLAQDALAIKLNGVVCDLNTLINSDAAIEIIT 70

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
              P    +  HS +H+MA+A++ ++   +   GP IE GFYYD   E  F  ++L  IE
Sbjct: 71  FTSPEGPEIFWHSSSHLMAQAIEELFAGSKFGAGPAIEQGFYYDVSSEHRFREEDLRAIE 130

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFES-KKEAYKVEIL-ESIPAKENVTLYRQGEWFD 181
            +M EI  RDS   +Q +S E+A   F S + + YKVEIL E++   E V+LY QG++ D
Sbjct: 131 ARMLEISKRDSSVQRQEMSREEAIAFFTSVRNDPYKVEILTETLKNVERVSLYHQGDFTD 190

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LC GPH+ STG++K    L  ++ +YWRGDSNR  + RIYG  + +++ L +++  +EE+
Sbjct: 191 LCTGPHLPSTGKIKAVL-LTNISASYWRGDSNREQMQRIYGITFPSEKLLKEHVARIEEA 249

Query: 242 EKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           ++RDHRKL  E++LF ++ E GSG+  W  KG  I   L S++R  + K  Y  + TP +
Sbjct: 250 KRRDHRKLGAELELFLLSPEVGSGLPMWLPKGAIIRSELESFLREEQRKRGYVPVYTPHI 309

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +  L+++SGH+  Y  + F      D       + LKPMNCP H  +++  ++SYR+LP
Sbjct: 310 GNIELYKRSGHYPYYSDSQFPPLTYHDEDGKQEQYLLKPMNCPHHHLIYSSKMRSYRDLP 369

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R  EFG+VYR+E SG L+GL R RGFTQDD+H++C  +Q+ +E      L   ++K  G
Sbjct: 370 LRFTEFGTVYRHEQSGELNGLARARGFTQDDSHIYCRPDQLVDEICSAIELTQFVFKTLG 429

Query: 420 FEKIMVKLS----TRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           F ++  +LS        K  G+  +W+ AE       D  + + +  ++  + +GE +FY
Sbjct: 430 FAEVQTRLSLHDPANQAKYGGTAEVWEQAEK------DVQEAAERMGVDYFIGIGEASFY 483

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++I++DAIGR WQ GT+QVD+ +P RF+  YV S  +K  PV+IHRA FGS+ERFI
Sbjct: 484 GPKIDFIVRDAIGRKWQLGTVQVDYVMPERFDLTYVGSDGQKHRPVVIHRAPFGSMERFI 543

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
           G++IE+  GN PLWL+P+Q  V  I     +YA  +   L +  +  E D R+E IN KI
Sbjct: 544 GLLIEHTAGNFPLWLAPVQVAVLPIAEENHDYATTVYRRLLAAGIRAELDTRSEKINRKI 603

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R+  + K P +++ G KE +   + +RR       + +  + I  L +E
Sbjct: 604 RDAEMSKTPCMLVIGQKEQANGEVSLRRHRQGDAGRFATDELIETLKQE 652


>gi|260062396|ref|YP_003195476.1| threonyl-tRNA synthetase [Robiginitalea biformata HTCC2501]
 gi|88783959|gb|EAR15130.1| threonyl-tRNA synthetase [Robiginitalea biformata HTCC2501]
          Length = 646

 Score =  495 bits (1274), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 259/650 (39%), Positives = 392/650 (60%), Gaps = 20/650 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           I++T PDG     P  +T  DVA  IS  LA+  ++   N +  + + P+ E G + + T
Sbjct: 2   IEITLPDGKTVEHPKGSTPLDVARGISEGLARNVISARFNNRKVEAATPLEEDGKLILYT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQI 122
             D        HS +H++A+A++ ++P +++ IGP I++GFYYD D  E   S  +   I
Sbjct: 62  WRDEEGKKAFWHSSSHVLAQALEELYPGIKLTIGPAIDNGFYYDVDLGEHTISEKDFPAI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EKK  EI      F  + +S + A   ++ ++  YK+E++E++    ++T      + DL
Sbjct: 122 EKKALEIARGKHDFRMREVSKKDALAYYKDERNPYKLELIENL-EDGDITFCDHDTFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRG H+ +TG +K F K++ VAGAYWRGD NRP L+R+YG ++  Q+ELT+YL+ LEE++
Sbjct: 181 CRGGHIPNTGLIKAF-KVLNVAGAYWRGDENRPQLTRVYGISFPKQKELTEYLHMLEEAK 239

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           KRDHRKL +E++LF  +   G G+  W  KG  + + L  ++++ + K  YE + TP + 
Sbjct: 240 KRDHRKLGKELELFTFSHKVGQGLPLWLPKGAALRERLEQFLKKAQKKAGYEMVVTPHIG 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            + L+  SGH+  Y  + F       T ++   F LKPMNCP H  +FN    SYR+LP 
Sbjct: 300 QKELYVTSGHYAKYGEDSFQ---PIHTPREDEEFLLKPMNCPHHCEIFNATPVSYRDLPK 356

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R AEFG+VYR E SG LHGL RVRGFTQDDAH+FCT +Q+  E   + +L + +    GF
Sbjct: 357 RFAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCTHDQLDEEFKNVIDLSLYVLGSLGF 416

Query: 421 EKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           E    ++S R    PEK +G    W+ AE  +      I  +++  ++  +  GE AFYG
Sbjct: 417 ENFTAQVSIRDPEKPEKYIGEVENWEKAEAAI------IHAATEKGLDFVIEPGEAAFYG 470

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK ++++KDA+GR WQ GTIQVD+ LP RF+  Y  S +E   PVMIHRA FGS+ERF+ 
Sbjct: 471 PKLDFMVKDALGRQWQLGTIQVDYTLPERFDLTYKGSDNELHRPVMIHRAPFGSMERFVA 530

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +++E+  GN PLWL+P QAIV  ++     YAQ++ N L++H +    D R+ET+  KIR
Sbjct: 531 LLLEHTGGNFPLWLTPQQAIVLPVSEKHENYAQKVLNSLENHEIRALLDARSETVGKKIR 590

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           E  + K P +II GD+E ++ +I +RR G      ++ ++A+  L KE +
Sbjct: 591 EAEMGKYPFMIIVGDQEMTDGTISVRRHGGEDLGSIT-VEALSGLVKEEI 639


>gi|295135444|ref|YP_003586120.1| threonyl-tRNA synthetase [Zunongwangia profunda SM-A87]
 gi|294983459|gb|ADF53924.1| threonyl-tRNA synthetase [Zunongwangia profunda SM-A87]
          Length = 648

 Score =  495 bits (1274), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 263/629 (41%), Positives = 393/629 (62%), Gaps = 19/629 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           IK+T PDGSIK     +T  DVA+SIS  LA+  ++   N  + + S P+  +G++ + T
Sbjct: 2   IKVTLPDGSIKELEQGSTPMDVAQSISAGLARNVISAKYNDTIVETSTPLTTDGNLTLYT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQI 122
             D        HS +H+MA+A+Q ++P  ++ IGP IE+GFYYD D  EQ  S  + ++I
Sbjct: 62  WNDDEGKKAFWHSTSHVMAQAIQDLYPGAKLTIGPAIENGFYYDVDFGEQKISESDFSKI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M EI      F  + ++ ++A + ++     +KVE++E++     +T      + DL
Sbjct: 122 ENRMLEIARGKHDFKMREVTKKEALDYYKKINNPFKVELIENL-EDGTITFCDHDTFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRG H+ +TG +K   KLM VAGAYWRGD   P L+R+YGT++  Q+EL +YL  LEE++
Sbjct: 181 CRGGHIPNTGIIKAV-KLMNVAGAYWRGDEKNPQLTRVYGTSFPKQKELKEYLELLEEAK 239

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           KRDHRKL +E++LF  ++  G G+  W  KG  + + L +++++ + K  YE + +P + 
Sbjct: 240 KRDHRKLGKELELFTFSQKVGQGLPLWLPKGAALRERLENFLKKAQKKAGYEMVVSPHIG 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            + L+  SGH+  Y  + F       T  +   F LKPMNCP H  ++N    SYR+LP 
Sbjct: 300 HKELYVTSGHYAKYGEDSFQ---PIKTPHEGEEFLLKPMNCPHHCEMYNSQSWSYRDLPK 356

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R AEFG+VYR E SG LHGL RVRGFTQDDAH+FCT EQ+  E  K+ +L + ++   GF
Sbjct: 357 RFAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCTPEQLDEEFKKVIDLTLYVFDSLGF 416

Query: 421 EKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           E    ++S R     EK +GSD +W+ AEN +      I  + +  +N  +  GE AFYG
Sbjct: 417 ENFTAQVSLRDPENKEKYIGSDDVWEKAENAI------INAAKEKGLNYVIETGEAAFYG 470

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK ++++KDA+GR WQ GTIQVD+NLP RF+  Y  S +E   PVMIHRA FGS+ERFI 
Sbjct: 471 PKLDFMVKDALGRSWQLGTIQVDYNLPERFDLTYKGSDNESHRPVMIHRAPFGSMERFIA 530

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           I++E+  GN PLWL P QAI+ +++    +Y+Q++ +LL++H +    D RNETI  KIR
Sbjct: 531 ILLEHTAGNFPLWLMPEQAIILSLSEKYEKYSQKVLSLLENHEIRAVLDNRNETIGKKIR 590

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFG 625
           E  ++K P ++I G++EA + ++ +R+ G
Sbjct: 591 EAEVQKFPYMLIVGEQEAKDGTVSVRKHG 619


>gi|332686097|ref|YP_004455871.1| threonyl-tRNA synthetase [Melissococcus plutonius ATCC 35311]
 gi|332370106|dbj|BAK21062.1| threonyl-tRNA synthetase [Melissococcus plutonius ATCC 35311]
          Length = 647

 Score =  495 bits (1274), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 257/642 (40%), Positives = 396/642 (61%), Gaps = 23/642 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           S I +TFPDGS+  F    T  ++A++IS SLAKKA+A  +N +  DL+ P++ +G  E+
Sbjct: 2   SKINITFPDGSVNEFQSGITTLEIAKTISNSLAKKALAGKLNNEWLDLNQPIQLDGIFEV 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELA 120
           IT +   +LA++R+S A++MA A+  ++P ++     + + G+YYD D  + P ++++L 
Sbjct: 62  ITLDHEDALAILRNSAAYLMAHALSHLFPTIKFGTAQVTDTGYYYDTDNGDSPITAEDLP 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IE +M +I+ ++ P L++ +SHE+AR LF      YK+E++  IP  EN+ +Y QG + 
Sbjct: 122 AIEAEMMQIVKKNEPNLRKVISHEEARRLFADN--PYKIELINEIPKNENIIIYEQGGFV 179

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DL +G  V STG+++  FKL+ VAGAYWRG+S   M+ RIYGTA+  Q++L +++   EE
Sbjct: 180 DLYQGVQVPSTGRIQ-IFKLLSVAGAYWRGNSKNRMMQRIYGTAFFNQKDLKEFIKMQEE 238

Query: 241 SEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQ 298
           +++RDHRKL +E+DLF I+++ GSG+ FW  KG  I +T+  Y+  K I   Y+ + TP 
Sbjct: 239 AKERDHRKLGKELDLFMISQEVGSGLPFWLPKGATIRRTIERYITDKEISLGYQHVYTPI 298

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           + +  L++ SGHW  Y  +MF        + D     L+PMNCP H+ V+   + SYREL
Sbjct: 299 MANVDLYKTSGHWAHYHEDMFPPM----DMGDGEMLVLRPMNCPHHMMVYKDTVHSYREL 354

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  T +D H F   +Q+  E  +I  L++++YKDF
Sbjct: 355 PIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKEEFKRILELMLAVYKDF 414

Query: 419 GFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
                  +LS R     +K    DA+W  A+ ++KG +D +K      ++     GE AF
Sbjct: 415 NITDYKFRLSYRDPNNKDKYFDDDAMWTKAQTMLKGAMDELK------LDYFEAEGEAAF 468

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH-PVMIHRAVFGSIER 533
           YGPK +  +K A+G +    TIQ+DF LP RF+  Y+    E  H PV+IHR +  ++ER
Sbjct: 469 YGPKLDVQVKTALGMEETLSTIQLDFLLPERFDLTYIGEDGENNHRPVVIHRGIVSTMER 528

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETIN 592
           F+  +IE +KG  PLWL+PIQA +  ++  A  +YA E    L+   L IE D RNE + 
Sbjct: 529 FVSYLIEVYKGAFPLWLAPIQATIIPVSVDAHSDYAYETKERLQMRGLRIEVDDRNEKMG 588

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           YKIR    +KIP  I+ GDKE  + ++ IR +GS  T+ ++L
Sbjct: 589 YKIRASQTQKIPYQIVVGDKEVDDSTVTIRHYGSKETEVMAL 630


>gi|70726243|ref|YP_253157.1| threonyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
 gi|68446967|dbj|BAE04551.1| threonyl-tRNA synthetase 1 [Staphylococcus haemolyticus JCSC1435]
          Length = 645

 Score =  495 bits (1274), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 261/636 (41%), Positives = 397/636 (62%), Gaps = 21/636 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           I + FPDG+ K F    T  ++A+SIS  L KKAVA     ++ DL+ P+ E GSIEI+T
Sbjct: 4   INVQFPDGNSKAFDKGITTEEIAQSISPGLRKKAVAGKFKNQMVDLTRPLEEDGSIEIVT 63

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P    +L V+RHS AH+MA+A++ ++ +V+  +GP+I+ GFYYDFD ++  SSD+  +IE
Sbjct: 64  PGSDEALEVLRHSTAHLMAQALKRLYGDVKFGVGPVIDGGFYYDFDMDEKVSSDDFEKIE 123

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K M++I+  +    ++ +S E+A+  F  K + YK+E++++IP  E+VTLY QGE+ DLC
Sbjct: 124 KTMKQIVDENHKIERKVVSREEAKSFF--KDDPYKLELIDAIPEDESVTLYSQGEFTDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RG HV ST ++K+F KL+  AGAYWRGDSN  ML RIYGTA+  +++L  +L  LEE  +
Sbjct: 182 RGVHVPSTSKIKEF-KLLSTAGAYWRGDSNNKMLQRIYGTAFFDKKDLKAHLEMLEERRE 240

Query: 244 RDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLD 301
           RDHR++ ++++LF   +  G+G+  W   G  I + +  Y+  +++   Y+ + TP + +
Sbjct: 241 RDHRRIGKDLELFTNNQLVGAGLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLAN 300

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             L++ SGHWD YR +MF     D+T        L+PMNCP H+ V+N+   SYRELP+R
Sbjct: 301 VELYKTSGHWDHYRDDMFPPMKLDET----EEMVLRPMNCPHHMMVYNNRPHSYRELPIR 356

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AE G+++R E SG++ GL RVRG T +D+H+F   +Q+ +E  ++ N+I  +Y DFGFE
Sbjct: 357 IAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKDEFKRVVNMIQEVYSDFGFE 416

Query: 422 KIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
               +LS R     EK +  D +W+ AE ++K  +D +     + I      GE AFYGP
Sbjct: 417 DYTFRLSYRDPEDKEKYMDDDEMWNKAETMLKEAVDEMGLPYVEAI------GEAAFYGP 470

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  +K A+G++    T Q+DF LP RF   Y+ S  E   PV+IHR V  ++ERF+  
Sbjct: 471 KLDVQVKTAMGKEETLSTAQIDFLLPERFELTYIGSDGENHRPVVIHRGVVSTMERFVAF 530

Query: 538 MIENFKGNLPLWLSPIQA-IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           + E  KG  P WL+P Q  I+        +YA+ + + LKS  + +E D RNE + YKIR
Sbjct: 531 LTEETKGAFPTWLAPKQVEIIPVNVDLHYDYARNLQDELKSQGVRVEIDDRNEKMGYKIR 590

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
           E  ++KIP  I+ GDKE     + +R++GS   + V
Sbjct: 591 EAQMQKIPYQIVVGDKEVENNQVNVRKYGSQDQETV 626


>gi|15807075|ref|NP_295804.1| threonyl-tRNA synthetase [Deinococcus radiodurans R1]
 gi|22654147|sp|Q9RSP3|SYT_DEIRA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|6459875|gb|AAF11630.1|AE002044_3 threonyl-tRNA synthetase [Deinococcus radiodurans R1]
          Length = 649

 Score =  495 bits (1274), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 256/642 (39%), Positives = 393/642 (61%), Gaps = 28/642 (4%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           + +T PDG   +    AT  D A++I   LA+ A+    NG++ DL  P+ +G SI +IT
Sbjct: 1   MHVTLPDGKQLDLQPGATALDAAKAIGPRLAQDALGATANGELTDLMTPLSDGASITLIT 60

Query: 64  PEDPRSLA-VIRHSCAHIMAEAVQSIW------PE-VQVAIGPIIEDGFYYDFDKEQPFS 115
            ++P   A + RHS  H+M++AV   +      P+ ++  +GP IE+G+Y DFD  +P  
Sbjct: 61  KKNPGDAAPLFRHSLGHVMSQAVGEYYKAKGYGPDAIKRGVGPYIENGWYQDFDLPEPLK 120

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            ++L +IEK M++II R     ++ +S ++A  L +   + YK E++E +P  E +T Y 
Sbjct: 121 EEDLPEIEKIMRDIIGRGLDITRREISKDEA--LAQFPHDPYKAELIEGLPDDEPITFYS 178

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
           QG++ DLCRGPH  STG++ + FKLM  +GAYWRG+   P+L RIYG A+ TQ+EL +YL
Sbjct: 179 QGDYTDLCRGPHFPSTGKLPQSFKLMSTSGAYWRGNEKNPILQRIYGVAFATQKELDEYL 238

Query: 236 YFLEESEKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEE 293
           + LEE+++RDHRKL +E++LF I    G G+  W   G  + + L ++M+ ++ +  Y+ 
Sbjct: 239 FQLEEAKRRDHRKLGKELELFTIDPLVGKGLPLWLPNGTVLREELTNFMKEQQFQRGYQG 298

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           + TP + +  L++ SGH+  Y  + F     D+       + LKPMNCP HV ++    +
Sbjct: 299 VVTPNIGNLDLYRTSGHYPYYSESQFNPIQVDE-----EEYMLKPMNCPHHVRIYASKPR 353

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYR+LPVRLAEFG+VYR E SG L+GL RVRGFTQDDAH+FC  +Q+  E L + +L + 
Sbjct: 354 SYRDLPVRLAEFGTVYRYEQSGELNGLTRVRGFTQDDAHIFCRPDQLKREFLDVLDLTVL 413

Query: 414 IYKDFGFEKIMVKLSTR-PE--KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
           + K FG   +  ++  R PE  K VG +  W  AE   + +++ ++      +   +  G
Sbjct: 414 VLKTFGMTDVRFRVGVRDPESDKYVGDEQNWALAE---RQIIEAVEEVG---LPYTIEPG 467

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           + AFYGPK ++++KD +GR+WQ GTIQVD+NLP RF+  Y     ++  P+MIHRA FGS
Sbjct: 468 DAAFYGPKLDFVVKDVLGREWQLGTIQVDYNLPERFDISYTGEDGQEHRPIMIHRAPFGS 527

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
           IERF GI+IE++ G+ PLWL+P Q ++  I      YA+E+   L    L  E D  +  
Sbjct: 528 IERFTGILIEHYAGDFPLWLAPRQVMIIPIADRHNAYAEELREELHRAGLRAEVDDSSNR 587

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIR-RFGSTTTQK 631
           +  K+R+  + KIP+++I GDKE   R + +R R G  T ++
Sbjct: 588 MQAKVRDAELHKIPVMLIVGDKEQEAREVSVRERTGEGTKER 629


>gi|332521036|ref|ZP_08397494.1| threonyl-tRNA synthetase [Lacinutrix algicola 5H-3-7-4]
 gi|332043129|gb|EGI79326.1| threonyl-tRNA synthetase [Lacinutrix algicola 5H-3-7-4]
          Length = 644

 Score =  495 bits (1274), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 261/649 (40%), Positives = 393/649 (60%), Gaps = 23/649 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           I++T PDGS+K+F  ++T  DVA+SIS  LA+  ++ + NG   +   P+  +GS+ + T
Sbjct: 2   IQITLPDGSVKSFETNSTPMDVAKSISEGLARNVISASFNGLTVETITPLTTDGSLILYT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQI 122
             +        HS AH++A+A+Q ++P  ++ IGP IE GFYYD D  +   +  +   +
Sbjct: 62  WNNDEGKKAFWHSSAHVLAQAIQELYPNAKLTIGPAIERGFYYDVDFGDDVLTDKDFKAV 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E KM EI      F  +  +  +A EL+  K   +K E+++++     +T      + DL
Sbjct: 122 ENKMLEIARGKHDFNMRSATKAEALELY--KNNPFKTELIQNL-EDGTITFCDHSTFTDL 178

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRG H+ +TG +K   K++ VAGAYWRGD  +P L+R+YG ++  Q+ELT+YL  LEE++
Sbjct: 179 CRGGHIPNTGIIKAV-KVLSVAGAYWRGDETKPQLTRVYGISFPKQKELTEYLALLEEAK 237

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           KRDHRKL +E++LF  ++  G+G+  W  KG  + + L ++++  + K  YE + +P + 
Sbjct: 238 KRDHRKLGKELELFTFSQKVGAGLPLWLPKGTALRERLENFLKAAQKKAGYEMVMSPHIG 297

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            + L+  SGH+  Y  + F       T KD   F LKPMNCP H  ++N    SY++LP 
Sbjct: 298 QKELYVTSGHYAKYGEDSFQ---PIKTPKDDEEFLLKPMNCPHHCEIYNASQWSYKDLPK 354

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R AEFG+VYR E SG LHGL RVRGFTQDDAH+FCT +Q+  E   + +L++ ++   GF
Sbjct: 355 RYAEFGTVYRYEQSGELHGLTRVRGFTQDDAHLFCTPDQLDAEFKNVIDLVLYVFGSLGF 414

Query: 421 EKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDR-INTGVLLGEGAFY 475
           E    ++S R    PEK +GS   W+ AE         I ++++D+ +N  +  GE AFY
Sbjct: 415 ENFTAQVSLRDPENPEKYIGSLENWEKAEQ-------AIISAAKDKGLNYVIETGEAAFY 467

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDA+GR WQ GTIQVD+NLP RF+  Y  S +E   PVMIHRA FGS+ERFI
Sbjct: 468 GPKLDFMVKDALGRQWQLGTIQVDYNLPERFDLTYKGSDNELHRPVMIHRAPFGSMERFI 527

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            I++E+  GN PLWL P Q  + T++    +Y +++ NLL++H +    D R+ETI  KI
Sbjct: 528 AILLEHTGGNFPLWLMPNQVSILTLSEKYEKYGEKVLNLLENHEIRALIDNRSETIGKKI 587

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           RE  + K P +II G+ E  E  I +R+ G      +S+ D   I+  E
Sbjct: 588 REAEMNKTPYMIIIGENEEKENKISVRQHGGEDLGTISVEDFSEIVKTE 636


>gi|323344262|ref|ZP_08084488.1| threonine--tRNA ligase [Prevotella oralis ATCC 33269]
 gi|323094991|gb|EFZ37566.1| threonine--tRNA ligase [Prevotella oralis ATCC 33269]
          Length = 654

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 251/640 (39%), Positives = 395/640 (61%), Gaps = 21/640 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           +K+TFPDGS++ +    TG  +AESIS +LA+  V+  +NG+  +L+ P+ E  +I +  
Sbjct: 2   VKITFPDGSVREYEQGVTGLQIAESISPALARNVVSCGVNGETVELNRPINEDATIALYK 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF--DKEQPFSSDELAQ 121
            ED        H+ AH++AEA+Q ++P +Q   GP IE+GF+YD    K    S  +  +
Sbjct: 62  FEDEEGKHTFWHTSAHLLAEALQELYPGIQFGFGPAIENGFFYDVMPKKGDVISESDFPK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE KM E+  +D   +++ LS   A + F++  + YK E ++       +T Y QG + D
Sbjct: 122 IEAKMMELAKKDEQVVRKSLSKADALKEFKADGQVYKCEHIDQDLEDGTITTYTQGAFTD 181

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ STG +K   K+  VAGA+WRGD+ R  L+RIYG  +  ++ L +YL  LEE+
Sbjct: 182 LCRGPHLMSTGLIKAV-KITSVAGAFWRGDAKREQLTRIYGITFPKKKMLDEYLVMLEEA 240

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEINTPQ 298
           +KRDHRK+ +EM+LF  +E  G G+  W  KG ++ +  +  M RKI+    Y+E+ TP 
Sbjct: 241 KKRDHRKIGKEMELFTFSERVGKGLPIWLPKGTEL-RLRLQDMLRKIQKRFGYQEVITPH 299

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +  ++L+  SGH+  Y  + F       T ++   + LKPMNCP H  VF    +SY++L
Sbjct: 300 IGSKNLYVTSGHYAHYGKDSFQ---PIHTPEEDEEYMLKPMNCPHHCEVFAWKPRSYKDL 356

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG+VYR E SG LHGL RVR FTQDDAH+FC  +Q+ +E L++ ++I +++K F
Sbjct: 357 PLRIAEFGTVYRYEKSGELHGLTRVRSFTQDDAHIFCRPDQVKSEFLRVMDIIQTVFKIF 416

Query: 419 GFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            F+    ++S R     EK +G+D +W+++E  +K      +  ++  ++  +  GE AF
Sbjct: 417 NFDNFEAQISLRDPKDREKYIGADEVWEESEQAIK------EACAEKGLDAKIAYGEAAF 470

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK ++++KDAIGR WQ GTIQVD+NLP RF   Y +  + K  PVMIHRA FGS+ERF
Sbjct: 471 YGPKLDFMVKDAIGRRWQLGTIQVDYNLPQRFKLEYTDEDNVKKTPVMIHRAPFGSLERF 530

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             ++IE+  G+ PLWL+P Q  +  I+    +YA++++    +  +    D RNE I  K
Sbjct: 531 TAVLIEHTAGHFPLWLTPDQVAILPISEKYNDYAKKVSKYFDAQGVRATIDDRNEKIGRK 590

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           IR++ + ++P ++I G+KEA++  + +R+ G      +++
Sbjct: 591 IRDNELMRVPYMVIVGEKEAADGLVSMRKQGGGEQATMTM 630


>gi|300778181|ref|ZP_07088039.1| threonine--tRNA ligase [Chryseobacterium gleum ATCC 35910]
 gi|300503691|gb|EFK34831.1| threonine--tRNA ligase [Chryseobacterium gleum ATCC 35910]
          Length = 639

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 264/650 (40%), Positives = 397/650 (61%), Gaps = 23/650 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGK-VCDLSDPVREGSIEIIT 63
           IK+T PD S+K F    T  DVA+SIS  LA+  ++  +N K V   +    + +++++T
Sbjct: 2   IKITLPDNSVKEFEGAVTPLDVAKSISEGLARNTISAIVNDKQVETTTPITTDSTVQLLT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQI 122
             D        HS AH++A+A+   +P+ ++ IGP IE GFYYD D  ++  S  +  +I
Sbjct: 62  WNDDLGKKAFWHSSAHLLAQAILEFYPDAKLTIGPAIESGFYYDVDFGDESLSEKDFEKI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EKK+ E   + S F    +S E+A + +      YKVE++ ++   E +T      + DL
Sbjct: 122 EKKILENAKKGSTFSLYPVSKEEALKTYADN--PYKVELISNLNDGE-ITFVTHDNFTDL 178

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRG H+ +TG VK   K++  AGAYWRG+   P L+R+YG ++  Q++LT+YL  LEE++
Sbjct: 179 CRGGHIPNTGIVKAV-KILNAAGAYWRGNEKNPQLTRVYGISFPKQKDLTEYLERLEEAK 237

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVL 300
           +RDHRKL +E+ +F  +E  G+G+  W  KG  + + L +++   + K  YE + +P + 
Sbjct: 238 RRDHRKLGKELGIFAFSEKVGAGLPLWLPKGTALRRKLENFLSDAQKKGGYEFVMSPHIG 297

Query: 301 DQHLWQQSGHWDSYRANMF-AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            + L+  SGHWD Y  + F  +K  ++       F LKPMNCP H  ++     SYR+LP
Sbjct: 298 AKELYVTSGHWDKYGEDSFQPIKTPNEG----EEFLLKPMNCPHHCEIYKTSQWSYRDLP 353

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
            R AEFG+VYR E SG LHGL RVRGFTQDDAH+FCT +Q+  E  K+ +L + ++K  G
Sbjct: 354 KRYAEFGTVYRYEQSGELHGLTRVRGFTQDDAHLFCTPDQLSEEFEKVIDLTLYVFKSLG 413

Query: 420 FEKIMVKLSTR-PE---KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           FE  + ++S R PE   K +GSD  W+ AE+ +      I  + +  + T +  GE AFY
Sbjct: 414 FEDFVTQVSLRDPENKQKYIGSDENWEKAESAI------INAAEKKGLKTVIEYGEAAFY 467

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDA+GR WQ GTIQVD+NLP RF+  Y+ S +EK  PVMIHRA FGS+ERFI
Sbjct: 468 GPKLDFMVKDALGRKWQLGTIQVDYNLPERFDLHYIGSDNEKHRPVMIHRAPFGSMERFI 527

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            I++EN  G+ PLWLSP Q I+  I+   V+Y+++++  L++H +S + D RNE    KI
Sbjct: 528 AILLENTAGDFPLWLSPDQFIILPISEKYVDYSKKVSQFLENHDISGQIDDRNEKTGKKI 587

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           R+  +KKIP +++ G+ E  E +I +RR G      + L D +    KE+
Sbjct: 588 RDAELKKIPFMLVVGENEEKEGTISVRRRGEGDLGVMKLEDFVAYFKKEA 637


>gi|291440752|ref|ZP_06580142.1| threonyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
 gi|291343647|gb|EFE70603.1| threonyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
          Length = 658

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 267/668 (39%), Positives = 396/668 (59%), Gaps = 46/668 (6%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           SD+++     S +   V  TG+  AE  +    +  +A  + G++ DLS  +++G ++E 
Sbjct: 2   SDVRVIIQRDSEREERVVTTGTTAAELFAGE--RSVIAARVAGELRDLSYELQDGETVEG 59

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +       L ++RHS AH+MA+AVQ ++PE ++ IGP ++DGFYYDFD ++PF  D+L  
Sbjct: 60  VEISSEDGLNILRHSTAHVMAQAVQELFPEAKLGIGPPVKDGFYYDFDVDKPFHPDDLKA 119

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN----------- 170
           IEKKMQEI  R   F ++ ++ ++ARE  E   E YK+E++    A  +           
Sbjct: 120 IEKKMQEIQKRGQRFSRRVVTDDEARE--ELADEPYKLELIGLKGAASHDDGADVEVGAG 177

Query: 171 -VTLY-----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYG 222
            +T+Y     + GE  W DLCRGPH+ +T  +  F KLM+ AGAYWRG    PML RIYG
Sbjct: 178 ELTIYDNLDAKTGELCWKDLCRGPHLPTTRNIPAF-KLMRNAGAYWRGSEKNPMLQRIYG 236

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLIS 281
           TAW +++EL  +L FL E+EKRDHRKL  E+DLF I E  GSG+  +H KG  + + +  
Sbjct: 237 TAWPSKEELKAHLEFLAEAEKRDHRKLGHELDLFSIPEQIGSGLAVFHPKGGIVRRVMED 296

Query: 282 YMRRKIKDD-YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
           Y RR+ +++ YE + TP      L++ SGH D Y   M+     D+ +     + LKPMN
Sbjct: 297 YSRRRHEEEGYEFVYTPHATKGKLFETSGHLDWYADGMYPPMQLDEGVD----YYLKPMN 352

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
           CP H  +F+   +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDDAH++CT+EQM
Sbjct: 353 CPMHNLIFDARGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYCTREQM 412

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTR-PEKRVGSDALWDDAENIMKGVLDTIKNSS 459
             E  K    ++++ +D+G     ++LST+ PEK VG+D  W++A   ++ V +      
Sbjct: 413 SEELDKTLTFVLNLLRDYGLTDFYLELSTKDPEKFVGTDEAWEEATETLRQVAE------ 466

Query: 460 QDRINTGVLL----GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS 515
                 G+ L    G  AFYGPK     KDAIGR WQ  TIQ+DFNLP RF+  Y  +  
Sbjct: 467 ----KQGLPLVPDPGGAAFYGPKISVQAKDAIGRTWQMSTIQLDFNLPERFDLEYTAADG 522

Query: 516 EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLL 575
            K  PVMIHRA+FGSIERF  +++E++ G  P WL+P+QA+   I  + VE+ ++ A   
Sbjct: 523 SKTRPVMIHRALFGSIERFFAVLLEHYAGAFPAWLAPVQAVGIPIGDAHVEHLEKFAAAA 582

Query: 576 KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
           +   L +E D  ++ +  KIR    +K+P ++I GD++ +  ++  R    +    + + 
Sbjct: 583 RKQGLRVEVDSSSDRMQKKIRNAQKQKVPFMVIAGDEDMANGAVSFRYRDGSQENGIPVD 642

Query: 636 DAIPILTK 643
           +AI  + K
Sbjct: 643 EAIAKIVK 650


>gi|78184510|ref|YP_376945.1| threonyl-tRNA synthetase [Synechococcus sp. CC9902]
 gi|123757112|sp|Q3AYC6|SYT_SYNS9 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|78168804|gb|ABB25901.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Synechococcus
           sp. CC9902]
          Length = 611

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 257/590 (43%), Positives = 363/590 (61%), Gaps = 23/590 (3%)

Query: 39  VAVAINGKVCDLSDPVREGSIEIITPEDPRS--LAVIRHSCAHIMAEAVQSIWPEVQVAI 96
           V V ++      S P+      ++ P+   S  L  IRHS +H+MA AVQ ++P  QV I
Sbjct: 5   VPVPVSSAAATTSAPL----APVVLPKTSESEQLLKIRHSMSHVMAMAVQKLFPNAQVTI 60

Query: 97  GPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEA 156
           GP  E GFYYDFD  +PF+ D+L  I+K+M +II R  P  +  +S ++A    +++ E 
Sbjct: 61  GPWTETGFYYDFDNPEPFTEDDLKAIKKEMGKIIGRKLPLERIEVSRDEAETRIKAQNEP 120

Query: 157 YKVEILESIPAKENVTLYRQG-EWFDLCRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNR 214
           YK+EILE +  +E +TLY  G +W+DLC GPHV +T ++  K F+L  VAGAYWRGD  +
Sbjct: 121 YKLEILERL--QEPITLYTLGDQWWDLCAGPHVENTKELHPKAFELESVAGAYWRGDETK 178

Query: 215 PMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGW 273
             L RIYGTAW T ++L ++     E+ +RDHR+L ++++LF I  E G+G++FWH +G 
Sbjct: 179 AQLQRIYGTAWETPEQLAEHKRRKVEALRRDHRRLGKDLELFSIEDEAGAGLVFWHPRGA 238

Query: 274 KIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           ++   +  + R+   +  YE + TP V D  LW+ SGH D Y  +MF     D+     R
Sbjct: 239 RMRLLIEDFWRQAHFEGGYELLYTPHVADISLWKTSGHLDFYAESMFGPMQVDE-----R 293

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
            + LKPMNCP HV  +   L+SYRELP+R AE G+VYR E  G +HGLMRVRGFTQDDAH
Sbjct: 294 EYQLKPMNCPFHVLTYASKLRSYRELPIRWAELGTVYRYERPGVMHGLMRVRGFTQDDAH 353

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
           VFC  +Q+ +E L+I +L   I   F F    + LSTRPEK +GS+A+W+ A    KG+ 
Sbjct: 354 VFCLPDQISDEILRILDLTERILSTFDFNHYEINLSTRPEKSIGSEAVWELA---TKGLT 410

Query: 453 DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
           + ++       N  +  G GAFYGPK +  ++DAIGR WQC TIQ+DFNLP RF   YV 
Sbjct: 411 EALERKGW---NFKIDEGGGAFYGPKIDLKIEDAIGRMWQCSTIQLDFNLPERFGLDYVA 467

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIA 572
           +   K  P+MIHRA+FGS+ERF GIM EN+ G+ P WL+P Q  +  +T     YA+++ 
Sbjct: 468 ADGSKQQPIMIHRAIFGSLERFFGIMTENYAGDFPFWLAPEQIRLLPVTDDVQPYAEQVL 527

Query: 573 NLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           N LK+  +    D   + +   IR     KIP++ + G KEA + +I +R
Sbjct: 528 NQLKTAGIRATIDQSGDRLGKIIRTGEQMKIPVLAVIGAKEAEQNAISLR 577


>gi|148239112|ref|YP_001224499.1| threonyl-tRNA synthetase [Synechococcus sp. WH 7803]
 gi|166225511|sp|A5GJT7|SYT_SYNPW RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|147847651|emb|CAK23202.1| Threonyl-tRNA synthetase [Synechococcus sp. WH 7803]
          Length = 610

 Score =  494 bits (1272), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 253/558 (45%), Positives = 350/558 (62%), Gaps = 19/558 (3%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           L  IRHS +H+MA AVQ ++P  +V IGP  E GFYYDFD  +PF+  +L  I+K M +I
Sbjct: 34  LLRIRHSMSHVMAMAVQQLFPNARVTIGPWTESGFYYDFDNPEPFTEADLKAIKKGMIKI 93

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE-WFDLCRGPHV 188
           I +  P  +  +S  +A E  +++ E YK+EILE +  +E +TLY  GE W+DLC GPHV
Sbjct: 94  INKKLPLERVEVSRSEAEEKIKAQNEPYKLEILEGL--QEPITLYTLGEDWWDLCAGPHV 151

Query: 189 RSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHR 247
            +TGQ+  K F+L  VAGAYWRGD  +  L RIYGTAW T ++L ++    EE+ +RDHR
Sbjct: 152 ENTGQLNAKAFELESVAGAYWRGDETKAQLQRIYGTAWETAEQLAEHKRRKEEALRRDHR 211

Query: 248 KLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLW 305
           ++ +++DLF I  E G+G++FWH +G ++   +  + R+   +  YE + TP V D  LW
Sbjct: 212 RIGKDLDLFSIEDEAGAGLVFWHPRGARMRLLIEEFWRQAHFEGGYELLYTPHVADISLW 271

Query: 306 QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEF 365
           + SGH D Y  +MF     D+     R + LKPMNCP HV  +   L+SYRELP+R AE 
Sbjct: 272 KTSGHLDFYAESMFGPMEVDE-----REYQLKPMNCPFHVLTYASKLRSYRELPIRWAEL 326

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
           G+VYR E  G +HGLMRVRGFTQDDAHVFC  EQ+ +E LKI +L   I   F F    +
Sbjct: 327 GTVYRYERPGVMHGLMRVRGFTQDDAHVFCLPEQISDEILKILDLTERILSTFDFNTYEI 386

Query: 426 KLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD-RINTGVLLGEGAFYGPKFEYILK 484
            LSTRPEK +G DA+WD A    KG+++ ++      +I+ G     GAFYGPK +  ++
Sbjct: 387 NLSTRPEKSIGDDAVWDLA---TKGLIEALERKGWAYKIDEG----GGAFYGPKIDLKIE 439

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           DAIGR WQC TIQ+DFNLP RF   Y+ +   K  P+MIHRA+FGS+ERF GIM EN+ G
Sbjct: 440 DAIGRMWQCSTIQLDFNLPERFKLDYIAADGSKQRPIMIHRAIFGSLERFFGIMTENYAG 499

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
           + PLWL+P Q  +  +T     YA+ + + L    +    D   + +   IR     KIP
Sbjct: 500 DYPLWLAPEQVRLLPVTDEVQPYAESLLDQLTQAGVRATIDRSGDRLGKLIRTGEQMKIP 559

Query: 605 IIIICGDKEASERSIGIR 622
           ++ + G KEA + ++ +R
Sbjct: 560 VLAVIGAKEAEQNAVSLR 577


>gi|269966330|ref|ZP_06180417.1| threonyl-tRNA synthetase [Vibrio alginolyticus 40B]
 gi|269829069|gb|EEZ83316.1| threonyl-tRNA synthetase [Vibrio alginolyticus 40B]
          Length = 485

 Score =  494 bits (1272), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 233/488 (47%), Positives = 326/488 (66%), Gaps = 15/488 (3%)

Query: 159 VEILESIPAKENV-TLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPML 217
           +EIL+   +++N   LY   E+ D+CRGPHV +    + F  L+ VAGAYWRG+S+  ML
Sbjct: 1   MEILDENVSRDNRPGLYHHEEYIDMCRGPHVPNMSFCQHF-TLLNVAGAYWRGNSDNKML 59

Query: 218 SRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQ 277
            RIYGTA++ ++ L  +L  LEE+ KRDHRK+ +++DLFH+ ++  G++FWH  GW IF+
Sbjct: 60  QRIYGTAFHDKKALKAHLTRLEEAAKRDHRKIGKQLDLFHMQQEAPGMVFWHHNGWSIFR 119

Query: 278 TLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFAL 336
            L  ++R K+ +  Y+E+  P ++D+ LW++SGHWD Y   MF       T  + R +A+
Sbjct: 120 DLEVFIRAKLDEYGYQEVKGPLMMDRVLWERSGHWDKYADAMFT------TSSENREYAI 173

Query: 337 KPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT 396
           KPMNCPGHV +FN GLKSYR+LP+R+AEFGS +RNEPSG+LHG+MRVRGFTQDDAH+FCT
Sbjct: 174 KPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGIMRVRGFTQDDAHIFCT 233

Query: 397 KEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIK 456
           + Q+  E      ++   Y+ FGF+ I+VKLSTRPEKRVGSD +WD +E  +K  L+++ 
Sbjct: 234 ESQIQEEVTNCIKMVYDTYQTFGFDNIVVKLSTRPEKRVGSDEIWDQSEEALKQSLESMD 293

Query: 457 NSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE 516
                 I   +  GEGAFYGPK E+ L D + R WQCGT+Q+DFNLP R  A YV  ++E
Sbjct: 294 ------IPYEIQEGEGAFYGPKIEFTLYDCLDRAWQCGTVQLDFNLPGRLGATYVGENNE 347

Query: 517 KCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLK 576
           +  PVMIHRA+ GS+ERFIGI+IE + G  P WL+P QA++  IT     Y QEI   L+
Sbjct: 348 RLVPVMIHRAILGSLERFIGILIEEYAGFFPTWLAPEQAVLMNITDKQSGYVQEIVQKLQ 407

Query: 577 SHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
              +  + D RNE I +KIREH++K++P +++ GD+E     I +R        K  + D
Sbjct: 408 KSGIRAKADLRNEKIGFKIREHTLKRVPYMLVVGDQEMEAGEIAVRTRKGKDLGKFKVDD 467

Query: 637 AIPILTKE 644
            I  +  E
Sbjct: 468 FIAYIQDE 475


>gi|21220031|ref|NP_625810.1| threonyl-tRNA synthetase [Streptomyces coelicolor A3(2)]
 gi|289772757|ref|ZP_06532135.1| threonyl-tRNA synthetase [Streptomyces lividans TK24]
 gi|22654145|sp|Q9L278|SYT_STRCO RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|6822227|emb|CAB70933.1| threonine-tRNA synthetase [Streptomyces coelicolor A3(2)]
 gi|289702956|gb|EFD70385.1| threonyl-tRNA synthetase [Streptomyces lividans TK24]
          Length = 658

 Score =  494 bits (1272), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 269/649 (41%), Positives = 388/649 (59%), Gaps = 41/649 (6%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           SD+++     S +   V  TG+  AE  +    +  +A  ++G + DL+  V++G ++E 
Sbjct: 2   SDVRVIIQRDSEREERVVTTGTTAAELFAGE--RSIIAARVSGDLKDLAYEVKDGETVEA 59

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +       L ++RHS AH+MA+AVQ ++PE ++ IGP ++DGFYYDFD E+PF  D+L  
Sbjct: 60  VEISSEDGLDILRHSTAHVMAQAVQELFPEAKLGIGPPVKDGFYYDFDVEKPFHPDDLKA 119

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE-------------SIPAK 168
           IEKKMQEI  R   F ++ ++ E ARE  E   E YK+E++               + A 
Sbjct: 120 IEKKMQEIQKRGQRFSRRVVTDEAARE--ELADEPYKLELIGLKGSASSDDGADVEVGAG 177

Query: 169 ENVTLY-----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIY 221
           E +T+Y     + GE  W DLCRGPH+ +T  +  F KLM+ A AYWRG    PML RIY
Sbjct: 178 E-LTIYDNLDAKTGELCWKDLCRGPHLPTTRNIPAF-KLMRNAAAYWRGSEKNPMLQRIY 235

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLI 280
           GTAW T+ EL  +L FL E+EKRDHRKL  E+DLF I E  GSG+  +H KG  I + + 
Sbjct: 236 GTAWPTKDELKAHLEFLAEAEKRDHRKLGSELDLFSIPEQIGSGLAVFHPKGGIIRRVME 295

Query: 281 SYMRRKIKDD-YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPM 339
            Y RR+ +++ YE + TP      L++ SGH D Y   M+     D+ +     + LKPM
Sbjct: 296 DYSRRRHEEEGYEFVYTPHATKGKLFETSGHLDWYADGMYPPMQLDEGVD----YYLKPM 351

Query: 340 NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQ 399
           NCP H  +F+   +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDDAH++CT+EQ
Sbjct: 352 NCPMHNLIFDARGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYCTREQ 411

Query: 400 MFNECLKIHNLIISIYKDFGFEKIMVKLSTR-PEKRVGSDALWDDAENIMKGVLDTIKNS 458
           M  E  K    ++++ +D+G     ++LST+ PEK VGSD  W++A   ++ V      +
Sbjct: 412 MSEELDKTLTFVLNLLRDYGLNDFYLELSTKDPEKFVGSDEAWEEATETLRQV------A 465

Query: 459 SQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC 518
            +  +      G  AFYGPK     +DAIGR WQ  TIQ+DFNLP RF+  Y  +   K 
Sbjct: 466 EKQNLELVADPGGAAFYGPKISVQARDAIGRTWQMSTIQLDFNLPERFSLEYTAADGAKT 525

Query: 519 HPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSH 578
            PVMIHRA+FGSIERF  +++E++ G +P WL+P+QA+   +  + V+Y +E A   +  
Sbjct: 526 RPVMIHRALFGSIERFFAVLLEHYAGAMPPWLAPVQAVGIPVGDAHVQYLEEFAAEARRK 585

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR-RFGS 626
            L ++ D  ++ +  KIR    +K+P +II GD++    ++  R R GS
Sbjct: 586 GLRVDVDASSDRMQKKIRTQQKQKVPFMIIVGDEDMHGGTVSFRYRDGS 634


>gi|330752453|emb|CBL87403.1| threonyl-tRNA synthetase [uncultured Flavobacteria bacterium]
          Length = 646

 Score =  494 bits (1272), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 259/649 (39%), Positives = 398/649 (61%), Gaps = 21/649 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           I +T PDGS +++    T  DVA+ IS  LA+  ++   N  V + S  ++ +G++ + T
Sbjct: 2   IHITLPDGSKRSYENPLTVIDVAKDISEGLARNVISANFNNVVAETSTLLKSDGTLILYT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQI 122
            +DP       HS +H++A+A++ ++P V+++IGP IE+GFYYD D      S  +L  I
Sbjct: 62  WKDPEGKKAFWHSSSHVLAQALEELYPGVKLSIGPAIENGFYYDVDLGNLSISEKDLGAI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E KM EI      F  + +S   A + +  +   YKVE++E++   E +T      + DL
Sbjct: 122 ETKMLEISREKHDFKMKSVSKSDALDKYRKEANPYKVELIENLTDGE-ITFCDHDSFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRG H+ +TG +K   KL+ VAGAYWRGD N   L+RIYG ++  Q+ L ++L  LEE++
Sbjct: 181 CRGGHIPNTGLIKAV-KLLSVAGAYWRGDENNKQLTRIYGISFPKQKALKEHLALLEEAK 239

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           KRDHRKL ++++LF  ++  G G+  W   G  +   L  ++++ ++K  YE ++TP + 
Sbjct: 240 KRDHRKLGKQLELFTFSKKVGQGLPLWLPNGAALRSRLEDFLKKAQVKAGYEMVSTPHIG 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            + L+  SGH++ Y  + F      +T K    F LKPMNCP H  ++N    SY+ELP 
Sbjct: 300 QKELYVTSGHYEKYGEDSFQ---PIETPKAEEEFLLKPMNCPHHCEIYNFKPYSYKELPK 356

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R AEFG+VYR E SG LHGL RVRGFTQDDAH+FCT +Q+ +E   + +L++ +++  GF
Sbjct: 357 RYAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCTPDQLDSEFKNVIDLVLYVFRSLGF 416

Query: 421 EKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDR-INTGVLLGEGAFY 475
           E    ++S R    PEK +GS   WD +E         I N+++D+ ++  +  GE AFY
Sbjct: 417 ENFTAQVSLRDPKTPEKYIGSVDNWDKSEK-------AIINAAEDKGLDYVIETGEAAFY 469

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDA+GR WQ GTIQVD+NLP RF+  Y  + +E   PVMIHRA FGS+ERF+
Sbjct: 470 GPKLDFMVKDALGRSWQLGTIQVDYNLPERFDLTYKGADNESHRPVMIHRAPFGSLERFV 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            I++E+  GN PLWL P Q ++ TI+ +  +YAQ++ NLL+ + +    D R+ET+  KI
Sbjct: 530 AILLEHTAGNFPLWLMPQQVVILTISENYEKYAQKVLNLLEINEIRGLIDDRSETMGKKI 589

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R+  IKKIP +II G++E    ++ +R+ G      +SL   + ++  E
Sbjct: 590 RDAEIKKIPYMIIVGEQEEKSATLSVRQHGGEDLGNLSLEAFVKVVKAE 638


>gi|222823074|ref|YP_002574647.1| threonyl-tRNA synthetase [Campylobacter lari RM2100]
 gi|254783514|sp|B9KEB1|SYT_CAMLR RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|222538295|gb|ACM63396.1| threonyl-tRNA synthetase [Campylobacter lari RM2100]
          Length = 603

 Score =  494 bits (1271), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 260/617 (42%), Positives = 385/617 (62%), Gaps = 23/617 (3%)

Query: 34  LAKKAVAVAINGKVCDLSDPVREGSIEIITPEDPR-SLAVIRHSCAHIMAEAVQSIWPEV 92
           + K  +A A N  + D      + ++  I  ++ + SL VIRHSCAH+MA+A++S++PE 
Sbjct: 1   MTKDIIAYANNETLVDTQSFNNDTNLTPIYFDNSKESLEVIRHSCAHLMAQAIKSLYPEA 60

Query: 93  QVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFES 152
           +  +GP+IEDGFYYDF  +   S ++L++IEKKM+E+        K  LS  + +E F +
Sbjct: 61  KFFVGPVIEDGFYYDFRVDSKISEEDLSKIEKKMKELAEAKLDITKYELSKAEVKEKFAN 120

Query: 153 KKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDS 212
             +  K E+L  IP  + V++Y+QGE+ DLCRGPHV +T  ++ FFKL +VAGAY  GD 
Sbjct: 121 --DDLKQEVLLRIPDGK-VSIYKQGEFEDLCRGPHVPNTKYLR-FFKLTRVAGAYLGGDE 176

Query: 213 NRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRK 271
            R ML+RIYGTA+  ++ L +YL  +EE++KRDHRKL  EM LF   ++ G G+  W   
Sbjct: 177 KREMLTRIYGTAFADKESLNEYLKIIEEAKKRDHRKLGNEMKLFAFDDEIGGGLPIWLSN 236

Query: 272 GWKIFQTL--ISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
           G K+   L  + Y   +++  YE +  P++L    W+ SGH+ +Y+ NM+  +       
Sbjct: 237 GAKLRSKLEHLLYKAHRLRG-YEPVRGPELLKADAWKISGHYANYKENMYFTQI------ 289

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
           D + + +KPMNC GH+ ++   ++SYR+LP++  E+G V+R+E SG LHGL RVR FTQD
Sbjct: 290 DEQEYGIKPMNCVGHIKIYQSDVRSYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFTQD 349

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMK 449
           DAH+FC   Q+  + L+I + + ++ K FGF+  M ++STRP K +G D +WD A N +K
Sbjct: 350 DAHIFCMPSQIKEQVLEILSFVDTLMKAFGFDYEM-EISTRPAKAIGDDEIWDIATNALK 408

Query: 450 GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAF 509
             LD      +  +  G+  G GAFYGPK +  + DA+ R WQCGTIQVDFNLPSRF   
Sbjct: 409 QALD------EQGLKYGIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDFNLPSRFKLE 462

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQ 569
           Y ++ +EK  PVM+HRA+ GS ERFIGI+IE+  G LP +++P Q  +  I+ +  EYA+
Sbjct: 463 YTDADNEKKQPVMLHRAILGSFERFIGILIEHCAGELPFFIAPTQVAIVPISQNHHEYAK 522

Query: 570 EIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           EIA  L    +  E   +NE++N KIR      +P+I++ GD+E + +S+ +R       
Sbjct: 523 EIAKKLLELGIDSEVYSKNESLNKKIRTAEKAHVPMILVLGDEEVANKSVALRD-RRAKE 581

Query: 630 QKVSLLDAIPILTKESL 646
           QK   LD    LTKE L
Sbjct: 582 QKTLTLDEFITLTKEKL 598


>gi|284031290|ref|YP_003381221.1| threonyl-tRNA synthetase [Kribbella flavida DSM 17836]
 gi|283810583|gb|ADB32422.1| threonyl-tRNA synthetase [Kribbella flavida DSM 17836]
          Length = 673

 Score =  494 bits (1271), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 261/637 (40%), Positives = 375/637 (58%), Gaps = 47/637 (7%)

Query: 36  KKAVAVAINGKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           + A+A  +NG++ DLS  V +G  IE +        A+IRHS AH++A+AVQ ++PE ++
Sbjct: 37  RSAIAARVNGELRDLSRVVADGDEIEPVKAGSEDGRAIIRHSTAHVLAQAVQELFPEAKL 96

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            IGP +E+GFYYDFD   PF+ D+L ++EKKMQ+II     F ++ +S + AR   E   
Sbjct: 97  GIGPPVENGFYYDFDVPTPFTPDDLGKLEKKMQQIIKERQRFSRRVVSDDDART--ELAA 154

Query: 155 EAYKVEIL----ESIPAKENVTLYRQG---------------EWFDLCRGPHVRSTGQVK 195
           E YK+E++     +  A E  ++   G                W DLCRGPHV +TG + 
Sbjct: 155 EPYKLELIGIKGSAADAAEGASVEVGGGELTIYDNVRRDDSVAWKDLCRGPHVPATGYLG 214

Query: 196 KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDL 255
            F KLM+ A AYWRG    P L RIYGTAW ++ EL  YL  LEE+ KRDHRKL  E+DL
Sbjct: 215 NF-KLMRTAAAYWRGSEKNPQLQRIYGTAWESRDELKAYLTRLEEAAKRDHRKLGTELDL 273

Query: 256 FHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDS 313
           F   ++ GSG+  +H KG  + + +  Y R R ++D YE + TP +   HL++ SGH D 
Sbjct: 274 FSFPDEIGSGLAVFHPKGGVLRKVMEDYSRQRHVEDGYEFVYTPHITKAHLFETSGHLDW 333

Query: 314 YRANMFAVKCADDTI-------KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFG 366
           Y   M+     D+         K  + + LKPMNCP H  +F+   +SYRELP+RL EFG
Sbjct: 334 YADGMYPPMHLDEERGPDGELRKQGQDYYLKPMNCPMHNLIFDARGRSYRELPLRLFEFG 393

Query: 367 SVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK 426
           +VYR E SG +HG+ R RGFTQDDAH++CT+EQM +E   +   ++ +  D+G +   ++
Sbjct: 394 TVYRLEKSGVIHGMTRARGFTQDDAHIYCTREQMRDELKNLLTFVLGLLADYGLDDFYLE 453

Query: 427 LSTR-PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL----GEGAFYGPKFEY 481
           LST+ PEK VGSD +W +A   ++ V           +++G+ L    G  AFYGPK   
Sbjct: 454 LSTKNPEKFVGSDEVWQEATETLREVA----------VSSGLELVPDPGGAAFYGPKISV 503

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
             +DAIGR WQ  TIQ+DFNLP RF   Y  S   +  PVMIHRA+FGSIERF+ ++ E+
Sbjct: 504 QARDAIGRTWQMSTIQLDFNLPERFELEYTASDGSRQRPVMIHRALFGSIERFVAVLTEH 563

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  P WL+P+Q I   IT   V+Y  ++A  LK+  + IE D  ++ +  KIR     
Sbjct: 564 YAGVFPPWLAPVQVIGIPITDGHVDYLYQVAAQLKAQGIRIEIDASDDRMQKKIRNAQKA 623

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           K+P ++I GD++ +  S+  R    +    + + DA+
Sbjct: 624 KVPYMLIAGDEDMAAGSVSFRYRDGSQKNGIPIADAV 660


>gi|225551832|ref|ZP_03772775.1| threonyl-tRNA synthetase [Borrelia sp. SV1]
 gi|225371627|gb|EEH01054.1| threonyl-tRNA synthetase [Borrelia sp. SV1]
          Length = 581

 Score =  493 bits (1270), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 247/571 (43%), Positives = 360/571 (63%), Gaps = 16/571 (2%)

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           RHS AH+MAEAV  ++P  ++AIGP I+DGFYYDF+ ++  + D L  IE +M+EI+   
Sbjct: 15  RHSIAHVMAEAVLDLFPNTKIAIGPPIKDGFYYDFEFKKQITEDSLLDIENRMREILKTG 74

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQ 193
           S F K+ +S E+A E+F  K E YK++++++   +  V++Y+   + DLCRGPHV +  +
Sbjct: 75  SSFEKEIISVEQALEIF--KDEPYKIDLIKNFDLQNEVSIYKSHNFVDLCRGPHVENMNK 132

Query: 194 VK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLARE 252
           +  K FKL  +AGAYWRG    PML+RIYGT WN ++EL  YL   EE +KRDHRKL +E
Sbjct: 133 IDPKAFKLTSIAGAYWRGSEKNPMLTRIYGTLWNNEKELRSYLNLREEIKKRDHRKLGKE 192

Query: 253 MDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGH 310
           +DLF I E+ G G++F+H  G KI   +  + R +  K+ Y+ + TP V    LWQ SGH
Sbjct: 193 LDLFSIHEEIGPGLVFFHPNGAKIRALIEDFWREEHSKNGYDILFTPHVGKSWLWQTSGH 252

Query: 311 WDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYR 370
            D Y+ +MFA    D +      + LKPMNCP H+A++N G  SYR+LP R AE G+VYR
Sbjct: 253 LDFYKDSMFAKIEMDKS-----DYYLKPMNCPFHIAIYNTGKHSYRDLPFRWAELGTVYR 307

Query: 371 NEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR 430
            E  G+LHG+MR RGFTQDDAH+ CT  Q+ +E  ++    I ++  FGF  +   LST+
Sbjct: 308 YEKIGALHGMMRARGFTQDDAHIICTHSQVLDEIKEVLRFAIYMWSKFGFSNLKAYLSTK 367

Query: 431 PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRD 490
           P+K VG+D+ W+ +  +++  L      S   +   +  G GAFYGPK +  + D++ R+
Sbjct: 368 PDKSVGNDSDWEMSLKVLEETL------SDFEVPYEIDKGGGAFYGPKIDLKIVDSLERE 421

Query: 491 WQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL 550
           WQ  TIQ DFNLP RFN  Y     ++  P MIHRA+ GSIERF GI++E++ G  PLWL
Sbjct: 422 WQMSTIQFDFNLPERFNMTYTAEDGKEKRPFMIHRALLGSIERFFGILVEHYGGAFPLWL 481

Query: 551 SPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           SP+Q ++  + +   +YA ++ N  K+  + I+ D  +  +N KIRE+  KKIP + I G
Sbjct: 482 SPVQVVIIPVNNIVEDYAIKVFNKFKNEGIRIKLDNSSSRMNAKIREYQAKKIPYMFIIG 541

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           ++EA+E  I IR   +     + L +A+  +
Sbjct: 542 EREATEERISIRTRTNEQINGIKLDEALKFI 572


>gi|332653846|ref|ZP_08419590.1| threonine--tRNA ligase [Ruminococcaceae bacterium D16]
 gi|332516932|gb|EGJ46537.1| threonine--tRNA ligase [Ruminococcaceae bacterium D16]
          Length = 589

 Score =  493 bits (1270), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 249/577 (43%), Positives = 356/577 (61%), Gaps = 15/577 (2%)

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
            T E+P       H+C+H+MA+AV+ +WPEV++AIGP I++G+YYD D    F+ + L Q
Sbjct: 9   FTFENPEYRQTYWHTCSHVMAQAVKRLWPEVKLAIGPSIDEGWYYDMDAPFAFTPEHLEQ 68

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE +M++I        +  L   +A +  E K E YKVE++  +P   +++ Y+QGE+ D
Sbjct: 69  IEAEMKKICKEKLKLERFELPRAEALKFMEEKGEPYKVELINDLPEDAHISFYKQGEFTD 128

Query: 182 LCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           LC GPH+ STG++K    KL     AYWRGDSNR  L RIYG A+  + EL  YL  +EE
Sbjct: 129 LCAGPHLDSTGRIKGNALKLTACNAAYWRGDSNRETLQRIYGIAFPKKDELDAYLQRIEE 188

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           ++KRDHRKL +E+ LF + ++G G  F+  KG  +  TL+ Y R+   K  Y EI+TP +
Sbjct: 189 AKKRDHRKLGKELGLFMLRDEGPGFPFFLPKGMTLKNTLLDYWRQIHKKYGYVEISTPII 248

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           L++ LW++SGHWD Y+ NM+       T+ D   FA+KPMNCPG + V+     SYRELP
Sbjct: 249 LNRQLWERSGHWDHYKQNMYT------TVIDGEDFAIKPMNCPGGMLVYASEPHSYRELP 302

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+ E G V+R+E SG+LHGL RVR F+QDDAHVF T+EQM +   +   L   +Y  FG
Sbjct: 303 LRVGEIGLVHRHELSGALHGLFRVRCFSQDDAHVFMTREQMKDVIQETVRLFDEVYSTFG 362

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
                ++LST PE  +G+   W+  ++I+K  +  +    +  IN G    +GAFYGPK 
Sbjct: 363 L-SYTIELSTMPEDHIGTVEEWEHNQDILKNAITDM--GKEFVINEG----DGAFYGPKL 415

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           ++ L D++GR WQCGTIQ+D  LP RF   Y     +K  PVMIHR V GSIERFIG++ 
Sbjct: 416 DFHLADSLGRTWQCGTIQLDSQLPERFELEYTGEDGQKHRPVMIHRVVLGSIERFIGVIT 475

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E+F G  P WL+P+Q  +  +T  A  YA +++  L      +ETD RNE I  KIRE +
Sbjct: 476 EHFAGAFPAWLAPVQVKILPVTDRAAAYADQLSKQLDEAGYRVETDHRNEKIGKKIREAT 535

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
           ++KIP +I+ GD++    ++ +R         +SL D
Sbjct: 536 MEKIPYMIVVGDRDMENNTVSVRLRTGEDLGAMSLAD 572


>gi|302561695|ref|ZP_07314037.1| threonyl-tRNA synthetase [Streptomyces griseoflavus Tu4000]
 gi|302479313|gb|EFL42406.1| threonyl-tRNA synthetase [Streptomyces griseoflavus Tu4000]
          Length = 658

 Score =  493 bits (1270), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 270/648 (41%), Positives = 387/648 (59%), Gaps = 39/648 (6%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           SD+++     S +   V  TG+  AE  +    +  +A  + G++ DLS  V +G ++E 
Sbjct: 2   SDVRVIIQRDSEREERVVTTGTTAAELFAGE--RSVIAARVAGELKDLSYEVADGETVEG 59

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +       L ++RHS AH+MA+AVQ ++PE ++ IGP ++DGFYYDFD ++PF  D+L  
Sbjct: 60  VEISSEDGLDILRHSTAHVMAQAVQELFPEAKLGIGPPVKDGFYYDFDVDKPFHPDDLKA 119

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEI--LESIPAKEN--------- 170
           IEKKMQEI  R   F ++ ++ E ARE  E   E YK+E+  L+   + ++         
Sbjct: 120 IEKKMQEIQKRGQRFSRRVVTDEAARE--ELADEPYKLELIGLKGSASHDDGADVEVGSG 177

Query: 171 -VTLY-----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYG 222
            +T+Y     + GE  W DLCRGPH+ +T  +  F KLM+ A AYWRG    PML RIYG
Sbjct: 178 ELTIYDNLDAKTGELCWKDLCRGPHLPTTRNIPAF-KLMRNAAAYWRGSEKNPMLQRIYG 236

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLIS 281
           TAW T+ EL  +L FL E+EKRDHRKL  E+DLF I E  GSG+  +H KG  I + +  
Sbjct: 237 TAWPTKDELKAHLEFLAEAEKRDHRKLGSELDLFSIPEQIGSGLAVFHPKGGIIRRVMED 296

Query: 282 YMRRKIKDD-YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
           Y RR+ +++ YE + TP      L++ SGH D Y   M+     D+ +     + LKPMN
Sbjct: 297 YSRRRHEEEGYEFVYTPHATKGKLFETSGHLDWYADGMYPPMQLDEGVD----YYLKPMN 352

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
           CP H  +F+   +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDDAH++CT+EQM
Sbjct: 353 CPMHNLIFDARGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYCTREQM 412

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTR-PEKRVGSDALWDDAENIMKGVLDTIKNSS 459
             E  K    ++++ +D+G     ++LST+ PEK VGSD  W++A   ++ V      + 
Sbjct: 413 SEELDKTLTFVLNLLRDYGLTDFYLELSTKDPEKFVGSDEAWEEATQTLREV------AE 466

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
           +  +      G  AFYGPK     KDAIGR WQ  TIQ+DFNLP RF+  Y  +   K  
Sbjct: 467 KQGLELVADPGGAAFYGPKISVQTKDAIGRTWQMSTIQLDFNLPERFDLEYTAADGSKTR 526

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH 579
           PVMIHRA+FGSIERF  +++E++ G  P WL+P+QA+   +  + VEY ++ A   +   
Sbjct: 527 PVMIHRALFGSIERFFAVLLEHYAGAFPAWLAPVQAVGIPVGDAHVEYLEKFATEARQKG 586

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR-RFGS 626
           L +E D  ++ +  KIR     K+P +II GD++ +  ++  R R GS
Sbjct: 587 LRVEVDSSSDRMQKKIRTQQKLKVPFMIIVGDEDMNAGTVSFRYRDGS 634


>gi|194477315|ref|YP_002049494.1| Threonyl-tRNA synthetase, class IIa [Paulinella chromatophora]
 gi|171192322|gb|ACB43284.1| Threonyl-tRNA synthetase, class IIa [Paulinella chromatophora]
          Length = 599

 Score =  493 bits (1270), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 258/606 (42%), Positives = 372/606 (61%), Gaps = 21/606 (3%)

Query: 51  SDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK 110
           +D V++ ++E++   +   L  IRHS +H+MA AVQ ++P  Q+ IGP  E GFYYDFD 
Sbjct: 5   TDSVKQNTMELLKTSESPQLLKIRHSMSHVMAMAVQKLFPNAQITIGPWTESGFYYDFDN 64

Query: 111 EQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN 170
            +PF+  +L  I+K M +II ++  F +  ++ +      +++ E YK+EIL  +   E 
Sbjct: 65  PEPFTEADLKSIKKGMIKIINQNLNFERVEVTRQDVACRIKAQNEPYKLEILAGL--IEP 122

Query: 171 VTLYRQGE-WFDLCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQ 228
           +T+Y+ GE W+DLC GPHV +T ++  K F L  VAG+YWRGD  +  L RIYGTAW T 
Sbjct: 123 ITIYKLGEQWWDLCAGPHVNNTNELNPKAFDLESVAGSYWRGDEKKAKLQRIYGTAWETP 182

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYMRRK- 286
           ++L +Y    +E+ +RDHR+L  ++DLF I  E GSG++FWH  G +I   +  + R+  
Sbjct: 183 EQLEEYKRRKKEALRRDHRRLGTDLDLFSIEDEAGSGLVFWHPNGARIRLLIEDFWRQSH 242

Query: 287 IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA 346
           ++  YE + TP + D  LW+ SGH D Y  +MF+    D+     R + LKPMNCP HV 
Sbjct: 243 LEAGYELLYTPHIADIRLWKTSGHLDFYSESMFSPMQVDE-----REYQLKPMNCPFHVL 297

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
            +   L+SYRELP+R AE G+VYR E  G +HGLMRVRGFTQDDAH+FC  EQ+ +E L+
Sbjct: 298 TYASKLRSYRELPIRWAELGTVYRYERPGVMHGLMRVRGFTQDDAHIFCLPEQIGSEVLE 357

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           + NL   I   F F K  + LSTRPEK +G D +WD A N   G+++ +   +    N  
Sbjct: 358 VLNLTERILSAFDFTKYEINLSTRPEKFIGGDDVWDLATN---GLVEALNAKNW---NYK 411

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
           +  G GAFYGPK +  +KDAIGR WQC TIQ+DFNLP RFN  YV S   +  P+MIHRA
Sbjct: 412 IDEGGGAFYGPKIDLKIKDAIGRTWQCSTIQLDFNLPERFNIEYVGSDGSRQRPIMIHRA 471

Query: 527 VFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF 586
           +FGS+ERF G+MIE+  G+ P WL+P Q  +  +T   + YA+E+ + LK   +    D 
Sbjct: 472 IFGSLERFFGVMIESCAGDFPFWLAPEQIRLLPVTDEVITYAEELLSQLKIAGVRASIDR 531

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
             + +   IR    KKIPI+ + G KEA    +G     S    ++ L++A  ++   +L
Sbjct: 532 TGDRLGKLIRNGEQKKIPILAVVGAKEA---EVGGASLRSRYEGELGLVNAYNLVQTATL 588

Query: 647 PPDCQK 652
             +C++
Sbjct: 589 -ANCKQ 593


>gi|297562207|ref|YP_003681181.1| threonyl-tRNA synthetase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296846655|gb|ADH68675.1| threonyl-tRNA synthetase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 657

 Score =  493 bits (1270), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 261/652 (40%), Positives = 395/652 (60%), Gaps = 43/652 (6%)

Query: 12  GSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSL 70
           G+ +    + T     E+  R++    +A  +NG+  DL+  + EG ++E I  +     
Sbjct: 13  GTPRAVAANTTAGQALEADGRTV----IAALVNGEPRDLARELHEGDTVEPIAIDSEEGR 68

Query: 71  AVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEII 130
           A++RHS AH++A+AVQ ++PE ++ IGP +E+GFYYDFD  +PF+  +L  IEKKMQ+I+
Sbjct: 69  AILRHSTAHVLAQAVQELFPEAKLGIGPPVENGFYYDFDVAEPFTPADLKSIEKKMQQIV 128

Query: 131 ARDSPFLKQYLSHEKARELFESKKEAYKVEILE----SIPAKEN---------VTLY--- 174
            +   F ++ +S E+AR   E   E YK+E++     +  A E          +T+Y   
Sbjct: 129 KQGQRFDRRVVSDEEARA--ELATEPYKLELIGLKGGATEAAEGAGVEVGAGELTIYDNV 186

Query: 175 --RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQE 230
             R GE  W DLCRGPH+ +T +V   FKLM+ A AYWRG    P L R+YGTAW +++ 
Sbjct: 187 HPRTGELCWKDLCRGPHLPTT-RVIPAFKLMRTAAAYWRGKETNPQLQRVYGTAWESKEA 245

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           L  +L FLEE+EKRDHRKL  E+DLF I ++ GSG+  +H KG  + + +  Y RR+ ++
Sbjct: 246 LKDHLTFLEEAEKRDHRKLGSELDLFSIPDEIGSGLAVFHPKGGTVRRVMEDYSRRRHEE 305

Query: 290 D-YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
           D YE + TP      L+++SGH D Y   M+     D      + + LKPMNCP H  +F
Sbjct: 306 DGYEFVYTPHATKGTLFEKSGHLDWYADGMYPPMQLDGG----QDYYLKPMNCPMHHLIF 361

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
           +   +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDD+H++CTKEQM +E   + 
Sbjct: 362 DARGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDSHIYCTKEQMADELDSLL 421

Query: 409 NLIISIYKDFGFEKIMVKLSTR-PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGV 467
             ++ + +D+G +   ++LST+ PEK VG+D +W++A  I++        ++Q +    V
Sbjct: 422 TFVLDLLRDYGLDDFYLELSTKDPEKYVGTDEVWEEATEILR-------EAAQKQGLELV 474

Query: 468 LLGEGA-FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
           L   GA FYGPK     KDAIGR WQ  TIQVDFN+P RF+  Y  +   +  PV+IHRA
Sbjct: 475 LDPAGAAFYGPKISVQAKDAIGRTWQMSTIQVDFNMPERFDLEYTAADGSRQRPVVIHRA 534

Query: 527 VFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF 586
           +FGSIERF  +++E++ G  P WL+P+QA+   I    V Y +E+A  L++  + +E D 
Sbjct: 535 LFGSIERFFAVLLEHYAGAFPAWLAPVQAVGIPIADEHVPYLRELAARLRAEGIRVEVDA 594

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
            ++ +  KIR    +K+P +++ GD++ S+ ++  R    +    V L +A+
Sbjct: 595 SDDRMQKKIRNAQKQKVPFMLLAGDEDVSKNAVSFRYRDGSQNNGVPLDEAV 646


>gi|221194423|ref|ZP_03567480.1| threonyl-tRNA synthetase [Atopobium rimae ATCC 49626]
 gi|221185327|gb|EEE17717.1| threonyl-tRNA synthetase [Atopobium rimae ATCC 49626]
          Length = 588

 Score =  493 bits (1269), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 253/580 (43%), Positives = 367/580 (63%), Gaps = 20/580 (3%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQIEKKMQE 128
           L VIRH+ AHI+A+A++ ++PE + A GP  E+GFYYD D  +   ++++ + +E +M++
Sbjct: 20  LHVIRHTAAHILAQAIKRLYPEAKFAYGPATENGFYYDVDLGDTKINTEDFSALEAEMKK 79

Query: 129 IIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           I   +       LS ++A +L E + E YKVE +  +   E +T Y+QGE+ D+C GPH+
Sbjct: 80  ITKENLKIETFELSRDEAIKLMEERGETYKVEHIGDLDPAERITFYKQGEYIDMCVGPHL 139

Query: 189 RSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRK 248
             T  VK F KL  V+GAYW+ D N  ML+R+ GTA+ T+ EL Q+L  LEE+EKRDHRK
Sbjct: 140 LYTKGVKAF-KLTGVSGAYWKADKNNKMLTRVNGTAFATKDELEQHLKMLEEAEKRDHRK 198

Query: 249 LAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQ 307
           + REM+LF +++ G G  FW   G  +   L  Y     +K +YEE+ TPQ+L + LW+ 
Sbjct: 199 IGREMELFMMSDFGPGSPFWLPNGMAVRNALTDYWHEMMVKFNYEEVLTPQILSRSLWET 258

Query: 308 SGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGS 367
           SGHWD Y+ NM+       T  D   FA+KPMNCPG   ++ +  +SYR+LP++LAE G 
Sbjct: 259 SGHWDHYKENMYT------TSVDEEDFAIKPMNCPGACLIYKNRPRSYRDLPLKLAEAGL 312

Query: 368 VYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKL 427
            +R E  G+LHGL RVR FTQDDAH+F   +Q+  +     +LI + Y  FGF    V+L
Sbjct: 313 DHRYEMKGALHGLFRVREFTQDDAHIFIRPDQITEQVADASHLITAYYAQFGF-PYRVEL 371

Query: 428 STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAI 487
           STRPE  +GSD  W+ AE  +K  L+++       I+  +  G+GAFYGPK ++ L D +
Sbjct: 372 STRPENSMGSDEDWERAEQGLKDALESMG------IDYVLNEGDGAFYGPKIDFHLTDCL 425

Query: 488 GRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           GR WQCGTIQ+DF LP  F   YV+S   K  P+MIHRA FGS +RFIGI+ E+++G  P
Sbjct: 426 GRSWQCGTIQLDFQLPHNFELEYVDSDGTKKQPIMIHRAGFGSFDRFIGILTEHYEGKFP 485

Query: 548 LWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE-HSIKKIPII 606
           +WL+P Q  V  ++  + EYA E+A  L++  + ++ D R+E I YKIRE  S+ ++P +
Sbjct: 486 VWLAPCQVKVLPVSEKSREYAHEVAGALQAAGIRVKVDNRDEKIGYKIREARSLDRVPYM 545

Query: 607 IICGDKEASERSIGIRRFGSTTTQKVSLLDA-IPILTKES 645
           +I G+KE    +I +R   + T Q  S LDA I  ++KE+
Sbjct: 546 LIIGEKEVEAHNISVRDRSNETVQ--STLDAFIAKVSKEN 583


>gi|301167107|emb|CBW26686.1| threonyl-tRNA synthetase [Bacteriovorax marinus SJ]
          Length = 584

 Score =  493 bits (1269), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 236/569 (41%), Positives = 358/569 (62%), Gaps = 16/569 (2%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPE--VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQ 127
           L  IRHS AH+MA+A+  ++P+  +Q  IGP+IE GFYYD D +     ++L +IE +MQ
Sbjct: 6   LDTIRHSTAHLMAQAISRVFPDTHIQFGIGPVIEHGFYYDVDMDHRLVDEDLEKIEAEMQ 65

Query: 128 EIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPH 187
            +I  +    ++ +S  +A + F+ K +  K +++ S      ++ Y+QGE+ DLCRGPH
Sbjct: 66  NLIKENLSIERKVMSRTEALDFFKDKNDELKQDLINSFEDDAEISCYQQGEFIDLCRGPH 125

Query: 188 VRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHR 247
           V STGQ+ KFFKL+ +AGAYWRGD N  ML R+Y   +N +++L  +L FLEE++KRDHR
Sbjct: 126 VESTGQLPKFFKLLNIAGAYWRGDENNKMLQRVYAACFNDKKQLKAHLNFLEEAKKRDHR 185

Query: 248 KLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQ 306
           KL ++++LFH         F+  KG  ++  LI +MR    K DY+E+ TPQ+LD  LW 
Sbjct: 186 KLGKDLELFHFNSVAPASPFFMPKGAFVYNRLIEFMREIYRKYDYQEVITPQILDSDLWH 245

Query: 307 QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFG 366
            SGH++ Y+ NM+  +       D R +A+KPMNCP H+ +F H   SYR+LP+R A+FG
Sbjct: 246 TSGHYEHYKENMYFSRI------DEREYAVKPMNCPCHMLMFKHYKYSYRDLPMRYADFG 299

Query: 367 SVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK 426
            ++R E +G++ GL RVR F QDDAH+F   + + +E  K+  +    Y+ FGF  I V 
Sbjct: 300 RLHRYEKAGAVTGLTRVRTFCQDDAHIFIDMDGIQDEITKLMEMFFICYEHFGFTGIKVN 359

Query: 427 LSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDA 486
           LSTRPEK+ G DA WD AEN ++   + +K S  +     +  G+GAFYGPK +  + DA
Sbjct: 360 LSTRPEKKSGDDATWDKAENALE---EALKKSGHEYF---IKEGDGAFYGPKIDVEIADA 413

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNL 546
           +GR +Q GTIQ+DF LP RF   Y N+      PV+IHRA+ GS+ERF G+ +E+  G  
Sbjct: 414 LGRYYQLGTIQLDFQLPERFGLSYTNAQGNDERPVVIHRALLGSLERFFGVYLEHVAGVF 473

Query: 547 PLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPI 605
           P WL+P QA++  + +   +++A ++ + L +  L ++ D RNE++ YK R+    K P 
Sbjct: 474 PFWLAPEQAVIVPVNNEFHLDFANKLQSELFAMGLRVKVDDRNESMGYKTRQIQKSKAPF 533

Query: 606 IIICGDKEASERSIGIRRFGSTTTQKVSL 634
           +I+ GD+E    S+ +R+ G   T+ +++
Sbjct: 534 MIVIGDREMENNSVSLRKHGEKKTESLTI 562


>gi|307564422|ref|ZP_07626963.1| threonine--tRNA ligase [Prevotella amnii CRIS 21A-A]
 gi|307346782|gb|EFN92078.1| threonine--tRNA ligase [Prevotella amnii CRIS 21A-A]
          Length = 650

 Score =  493 bits (1269), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 251/631 (39%), Positives = 392/631 (62%), Gaps = 19/631 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI-EIIT 63
           +K+TFPDGS++ +    TG  +AESIS +LA+  V+  +NG   +L+ P+ E +I  +  
Sbjct: 2   VKITFPDGSVREYEQGVTGYQIAESISPALARNVVSCGVNGVTTELNRPINEDAIIALYR 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ--PFSSDELAQ 121
            ED        HS AH++AEA++ ++P +Q   GP +E+GF+YD       P S ++  +
Sbjct: 62  FEDEEGKHSFWHSSAHLLAEALKELYPGIQFGFGPALENGFFYDVQTADGTPISENDFPK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE KM E+  ++SP +++ +S  +A + F++  + YKVE +E       ++ Y QG + D
Sbjct: 122 IEAKMMELAKKNSPIIRREVSKAEAIKEFKADGQEYKVEHIEKDLEDGTISTYSQGNFTD 181

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ STG +K   KL  VAGA+WRGD+    L+RIYG  +  ++ L +YL  LEE+
Sbjct: 182 LCRGPHLVSTGLIKAV-KLTSVAGAFWRGDAKNAQLTRIYGITFPKKKMLDEYLLMLEEA 240

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQV 299
           +KRDHRK+ +EM+LF  ++  G G+  W  KG ++   L   +R+ +K  +Y+E+ TP +
Sbjct: 241 KKRDHRKIGKEMELFMFSDRVGKGLPIWLPKGTQLRLRLQDMLRKLLKPYNYQEVITPGI 300

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             ++L+  SGH+  Y  + F       T ++   + LKPMNCP H  V+ +  +SY++LP
Sbjct: 301 GSKNLYITSGHYAHYGKDAFQ---PIQTPEEDEEYMLKPMNCPHHCEVYAYKPRSYKDLP 357

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AEFG+V+R E SG LHGL RVR FTQDDAH+F   +Q+  E     ++I+ ++K FG
Sbjct: 358 LRIAEFGTVFRYEKSGELHGLTRVRNFTQDDAHIFVRPDQVKAEFENNIDIILKVFKTFG 417

Query: 420 FEKIMVKLSTR-PE---KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           FE    ++S R PE   K +G D +W+++E  +K      +   +  +   V LGE AFY
Sbjct: 418 FENYEAQISLRDPEDKDKYIGDDEVWNESEQAIK------QACKEKGLKATVELGEAAFY 471

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDAIGR WQ GTIQVD+NLP RF+  Y    + K  PVMIHRA FGS+ERF 
Sbjct: 472 GPKLDFMVKDAIGRRWQLGTIQVDYNLPQRFHLEYTAEDNTKKTPVMIHRAPFGSLERFT 531

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE+  G+ PLWL+P Q  +  ++    +YA+++   L +  +    D RNE +  KI
Sbjct: 532 AVLIEHTAGHFPLWLTPDQVAILPVSEKYNDYARKVKQQLDASDVRALIDDRNEKVGRKI 591

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGS 626
           R++ +K+IP +++ G+KEA+E  + +R+ G 
Sbjct: 592 RDNELKRIPYMVVVGEKEAAEGLVAMRKQGG 622


>gi|17232215|ref|NP_488763.1| threonyl-tRNA synthetase [Nostoc sp. PCC 7120]
 gi|17133860|dbj|BAB76422.1| threonyl-tRNA synthetase [Nostoc sp. PCC 7120]
          Length = 612

 Score =  493 bits (1268), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 253/591 (42%), Positives = 361/591 (61%), Gaps = 35/591 (5%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           L  IRH+CAHIMA AVQ ++   +VA GP+ ++GFYYDFD     + D+L +I  +M+ I
Sbjct: 20  LVRIRHTCAHIMAMAVQKLFLGTKVATGPVTDNGFYYDFDCPISITPDDLGKIAAEMRRI 79

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE----------- 178
           I  + P +++ +  E+ R       E YK+EIL+ IP +E +T Y  G            
Sbjct: 80  IKANLPIIREEVQREEIRTEIAQLNEPYKLEILDRIPPEETITRYFIGSPDTSTPESSLF 139

Query: 179 ----------WFDLCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNT 227
                     W+DLC GPH+  TG++    F+L+ +AGAYW+GD ++P L RIYGTAW T
Sbjct: 140 VADVKPASNYWWDLCAGPHINFTGEIDPNSFQLLNIAGAYWQGDESKPQLQRIYGTAWKT 199

Query: 228 QQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR- 285
           + EL  YL   EE+ +RDHRKL +E++LF I E+ G G++FWH KG  I   +  Y R+ 
Sbjct: 200 KAELEAYLKQREEALRRDHRKLGQELNLFSIQEEAGGGLVFWHPKGASIRYIIEDYWRKC 259

Query: 286 KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            ++  Y+ + TP V +  LW+ SGH+D Y+ NMF     D    + + + +KPMNCP HV
Sbjct: 260 HLESGYQLLYTPHVANLDLWKTSGHFDFYQENMF-----DSMEVENQAYQIKPMNCPFHV 314

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
             + H L SYRELP+R AE G+VYR E SG+LHGLMRVRGFTQDDAH+FC   Q+ +E L
Sbjct: 315 LTYKHQLHSYRELPLRWAELGTVYRYERSGALHGLMRVRGFTQDDAHIFCLPHQIADEIL 374

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
            + NL   I  DFGF+   V LSTRP+K VG++ +W+ A + ++  LD          N 
Sbjct: 375 GVLNLTEHILSDFGFKNYEVNLSTRPDKSVGNNEVWELATSALRQALDA------KGWNY 428

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
            V  G GAFYGPK +  ++DAIGR WQC TIQVDFNLP RF+  Y+ +   +  P+MIHR
Sbjct: 429 IVDEGGGAFYGPKIDIKIQDAIGRLWQCSTIQVDFNLPERFDMEYIATDGSRQRPIMIHR 488

Query: 526 AVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD 585
           A+FGS+ERF GI+IEN+ G+ PLWL+P+Q  +  ++     Y + +A  L+     +E D
Sbjct: 489 AIFGSLERFFGILIENYAGDFPLWLAPVQIRLLPVSDDVRGYTESVAIALQKDGFRVEID 548

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
              E +  +IR   ++KIP++ + G KE   +++ +R   +     ++L D
Sbjct: 549 ISGERLGKQIRTAELEKIPVVGVVGKKEVENQNLSVRTRANGDLGAINLND 599


>gi|297198372|ref|ZP_06915769.1| threonyl-tRNA synthetase [Streptomyces sviceus ATCC 29083]
 gi|197714430|gb|EDY58464.1| threonyl-tRNA synthetase [Streptomyces sviceus ATCC 29083]
          Length = 658

 Score =  493 bits (1268), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 276/670 (41%), Positives = 392/670 (58%), Gaps = 50/670 (7%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLS---DPVREGSI 59
           SD+++     S +   V  TG+  AE  +    +  VA  + G++ DL+       E   
Sbjct: 2   SDVRVIIHRDSEREERVVTTGTTAAELFAGE--RSIVAARVGGELKDLAYVLSEGEEVEG 59

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
             I+ ED   L ++RHS AH+MA+AVQ ++PE ++ IGP ++DGFYYDFD E+PF+ ++L
Sbjct: 60  VEISSED--GLNILRHSTAHVMAQAVQELFPEAKLGIGPPVKDGFYYDFDVEKPFTPEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEI--LESIPAKEN------- 170
             IEKKMQEI  R   F ++ ++ E ARE  E   E YK+E+  L+   + ++       
Sbjct: 118 KAIEKKMQEIQKRGQKFSRRVVTDEAARE--ELSDEPYKLELIGLKGSASSDDGADVEVG 175

Query: 171 ---VTLY-----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRI 220
              +T+Y     + G+  W DLCRGPH+ ST  +  F KLM+ A AYWRG    PML RI
Sbjct: 176 SGELTIYDNLDAKTGDLCWKDLCRGPHLPSTRAIPAF-KLMRNAAAYWRGSEKNPMLQRI 234

Query: 221 YGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTL 279
           YGTAW T+ EL  +L FL E+EKRDHRKL  E+DLF I E  GSG+  +H KG  I + +
Sbjct: 235 YGTAWPTKDELKAHLDFLAEAEKRDHRKLGSELDLFSIPEQIGSGLAVFHPKGGIIRRVM 294

Query: 280 ISYMRRKIKDD-YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKP 338
             Y RR+ +++ YE + TP      L++QSGH D Y   M+     D+ +     + LKP
Sbjct: 295 EDYSRRRHEEEGYEFVYTPHATKGKLFEQSGHLDWYADGMYPPMQLDEGVD----YYLKP 350

Query: 339 MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE 398
           MNCP H  +F+   +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDDAH++CT+E
Sbjct: 351 MNCPMHNLIFDARGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYCTRE 410

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLSTR-PEKRVGSDALWDDAENIMKGVLDTIKN 457
           QM  E  K    ++ + +D+G     ++LST+ PEK VGSD +W++A   ++ V +    
Sbjct: 411 QMSEELDKTLTFVLGLLRDYGLTDFYLELSTKDPEKFVGSDEVWEEATETLRQVAE---- 466

Query: 458 SSQDRINTGVLL----GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS 513
                   G+ L    G  AFYGPK     KDAIGR WQ  TIQ+DFNLP RF   Y + 
Sbjct: 467 ------KQGLPLVPDPGGAAFYGPKISVQTKDAIGRTWQMSTIQLDFNLPERFELEYTSP 520

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIAN 573
              K  PVMIHRA+FGSIERF  +++E++ G  P WL+P+QA+   I  + VEY ++ A 
Sbjct: 521 DGSKQRPVMIHRALFGSIERFFAVLLEHYAGAFPAWLAPVQALGIPIGDAHVEYLEKFAA 580

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
             K   L +E D  ++ +  KIR    +K+P ++I GD++ +  S+  R    +    + 
Sbjct: 581 AAKKQGLRVEVDSSSDRMQKKIRNAQKQKVPFMVIAGDEDMAGGSVSFRYRDGSQENGIP 640

Query: 634 LLDAIPILTK 643
             +AI  + K
Sbjct: 641 FDEAIAKIAK 650


>gi|182439796|ref|YP_001827515.1| threonyl-tRNA synthetase [Streptomyces griseus subsp. griseus NBRC
           13350]
 gi|238689023|sp|B1W3F0|SYT_STRGG RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|178468312|dbj|BAG22832.1| putative threonyl-tRNA synthetase [Streptomyces griseus subsp.
           griseus NBRC 13350]
          Length = 658

 Score =  492 bits (1267), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 269/668 (40%), Positives = 390/668 (58%), Gaps = 46/668 (6%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           SD+++     S +   V  TG+   E       +  VA  I G++ DLS  +R+G S+E 
Sbjct: 2   SDVRVIIQRDSEREEHVVTTGTTAGELFPGQ--RTVVAARIGGELKDLSYELRDGESVEP 59

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +       L ++RHS AH+MA+AVQ ++PE ++ IGP ++DGFYYDFD E+PF+ ++L  
Sbjct: 60  VEISSEDGLNILRHSTAHVMAQAVQELFPEAKLGIGPPVKDGFYYDFDVEKPFTPEDLKA 119

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN----------- 170
           IEKKMQEI  R   F ++ +S E ARE  E   E YK+E++    +  +           
Sbjct: 120 IEKKMQEIQKRGQKFSRRVVSDEAARE--ELADEPYKLELIGIKGSASSDDGADVEVGGG 177

Query: 171 -VTLY-----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYG 222
            +T+Y     + G+  W DLCRGPH+ +T  +  F KLM+ A AYWRG    PML RIYG
Sbjct: 178 ELTIYDNLDPKTGDLCWKDLCRGPHLPTTRFIPAF-KLMRNAAAYWRGSEKNPMLQRIYG 236

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLIS 281
           TAW T+ EL  +L FLEE+ KRDHRKL  E+DLF   ++ G G+  +H KG  I + +  
Sbjct: 237 TAWPTKDELKAHLEFLEEAAKRDHRKLGNELDLFSFPDEIGPGLAVFHPKGGVIRRAMED 296

Query: 282 YMRRKIKDD-YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
           Y RR+ +++ YE + +P      L+++SGH D Y   M+     DD +     + LKPMN
Sbjct: 297 YSRRRHEEEGYEFVYSPHATKGKLFEKSGHLDWYADGMYPPMQLDDGVD----YYLKPMN 352

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
           CP H  +F+   +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDDAH++CTKEQM
Sbjct: 353 CPMHNLIFDARGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRSRGFTQDDAHIYCTKEQM 412

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTR-PEKRVGSDALWDDAENIMKGVLDTIKNSS 459
             E  +    ++++ +D+G     ++LST+ PEK VGSD  W++A   ++ V +      
Sbjct: 413 AEELDRTLTFVLNLLRDYGLTDFYLELSTKDPEKYVGSDETWEEATETLRQVAE------ 466

Query: 460 QDRINTGVLL----GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS 515
                 G+ L    G  AFYGPK     KDAIGR WQ  T+Q+DFNLP RF+  Y     
Sbjct: 467 ----KQGLPLVPDPGGAAFYGPKISVQCKDAIGRTWQMSTVQLDFNLPERFDLEYTGPDG 522

Query: 516 EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLL 575
            K  PVMIHRA+FGSIERF  +++E++ G  P+WL+P+QA+   I  + + Y QE A   
Sbjct: 523 SKQRPVMIHRALFGSIERFFAVLLEHYAGAFPVWLAPVQAVGIPIGDAHIPYLQEFAAKA 582

Query: 576 KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
           +   L ++ D  ++ +  KIR     K+P +II GD++ +  ++  R    +    + + 
Sbjct: 583 RKQGLRVDVDASSDRMQKKIRNQQKNKVPFMIIAGDEDMANGAVSFRYRDGSQENGIPVD 642

Query: 636 DAIPILTK 643
           +AI  + K
Sbjct: 643 EAIAKIAK 650


>gi|239932385|ref|ZP_04689338.1| threonyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
          Length = 653

 Score =  492 bits (1266), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 264/652 (40%), Positives = 389/652 (59%), Gaps = 46/652 (7%)

Query: 19  VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIRHSC 77
           V  TG+  AE  +    +  +A  + G++ DLS  +++G ++E +       L ++RHS 
Sbjct: 13  VVTTGTTAAELFAGE--RSVIAARVAGELRDLSYELQDGETVEGVEISSEDGLNILRHST 70

Query: 78  AHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFL 137
           AH+MA+AVQ ++PE ++ IGP ++DGFYYDFD ++PF  D+L  IEKKMQEI  R   F 
Sbjct: 71  AHVMAQAVQELFPEAKLGIGPPVKDGFYYDFDVDKPFHPDDLKAIEKKMQEIQKRGQRFS 130

Query: 138 KQYLSHEKARELFESKKEAYKVEILESIPAKEN------------VTLY-----RQGE-- 178
           ++ ++ ++ARE  E   E YK+E++    A  +            +T+Y     + GE  
Sbjct: 131 RRVVTDDEARE--ELADEPYKLELIGLKGAASHDDGADVEVGAGELTIYDNLDAKTGELC 188

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           W DLCRGPH+ +T  +  F KLM+ AGAYWRG    PML RIYGTAW +++EL  +L FL
Sbjct: 189 WKDLCRGPHLPTTRNIPAF-KLMRNAGAYWRGSEKNPMLQRIYGTAWPSKEELKAHLEFL 247

Query: 239 EESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINT 296
            E+EKRDHRKL  E+DLF I E  GSG+  +H KG  + + +  Y RR+ +++ YE + T
Sbjct: 248 AEAEKRDHRKLGHELDLFSIPEQIGSGLAVFHPKGGIVRRVMEDYSRRRHEEEGYEFVYT 307

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P      L++ SGH D Y   M+     D+ +     + LKPMNCP H  +F+   +SYR
Sbjct: 308 PHATKGKLFETSGHLDWYADGMYPPMQLDEGVD----YYLKPMNCPMHNLIFDARGRSYR 363

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ELP+RL EFG+VYR E SG +HGL R RGFTQDDAH++CT+EQM  E  K    ++++ +
Sbjct: 364 ELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYCTREQMSEELDKTLTFVLNLLR 423

Query: 417 DFGFEKIMVKLSTR-PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL----GE 471
           D+G     ++LST+ PEK VG+D  W++A   ++ V +            G+ L    G 
Sbjct: 424 DYGLTDFYLELSTKDPEKFVGTDEAWEEATETLRQVAE----------KQGLPLVPDPGG 473

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
            AFYGPK     KDAIGR WQ  TIQ+DFNLP RF+  Y  +   K  PVMIHRA+FGSI
Sbjct: 474 AAFYGPKISVQAKDAIGRTWQMSTIQLDFNLPERFDLEYTAADGSKTRPVMIHRALFGSI 533

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           ERF  +++E++ G  P WL+P+QA+   I  + VE+ ++ A   +   L +E D  ++ +
Sbjct: 534 ERFFAVLLEHYAGAFPAWLAPVQAVGIPIGDAHVEHLEKFAAAARKQGLRVEVDSSSDRM 593

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             KIR    +K+P ++I GD++ +  ++  R    +    + + +AI  + K
Sbjct: 594 QKKIRNAQKQKVPFMVIAGDEDMANGAVSFRYRDGSQENGIPVDEAIAKIVK 645


>gi|296270051|ref|YP_003652683.1| threonyl-tRNA synthetase [Thermobispora bispora DSM 43833]
 gi|296092838|gb|ADG88790.1| threonyl-tRNA synthetase [Thermobispora bispora DSM 43833]
          Length = 657

 Score =  492 bits (1266), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 260/643 (40%), Positives = 387/643 (60%), Gaps = 38/643 (5%)

Query: 19  VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSC 77
           V A G+   +++     +  +A  ING++ DL+  V +G  IE +T +     A++RHS 
Sbjct: 17  VVAAGTTAGQALEAD-GRTVIAARINGELRDLATEVADGDVIEPVTIDSGDGRAILRHST 75

Query: 78  AHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFL 137
           AH++A+AVQ ++PE ++ IGP IE+GFYYDFD  +PF+ ++L +IEK+M+EII +   F 
Sbjct: 76  AHVLAQAVQELFPEAKLGIGPPIENGFYYDFDVREPFTPEDLKRIEKRMREIIKQGQLFR 135

Query: 138 KQYLSHEKARELFESKKEAYKVEILESIPAKEN------------VTLY-----RQGE-- 178
           ++ ++ E+ARE  E   E YK+E++E   A  +            +T+Y     + GE  
Sbjct: 136 RRPVTDEQARE--ELAGEPYKLELIELKGAAGSEDGANVEVGAGQLTIYDNIDPKTGEVC 193

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           W DLCRGPH+ ST  +  F  LM+ +GAYWRG    P L RIYGTAW ++++  +YL+FL
Sbjct: 194 WKDLCRGPHLPSTKAIPAF-ALMRSSGAYWRGSEKNPQLQRIYGTAWESKEKQDEYLHFL 252

Query: 239 EESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
           EE+EKRDHR+L  E+DLF   E+ GSG+  +H KG  I + +  Y RR+ ++  Y  +NT
Sbjct: 253 EEAEKRDHRRLGVELDLFSFPEELGSGLPVFHPKGGTIRRIMEDYSRRRHEEAGYSFVNT 312

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +  + L+Q SGH + Y   MF     +        + LKPMNCP H  +F    +SYR
Sbjct: 313 PHITKEKLYQISGHLNWYADAMFPPMELEGA-----RYYLKPMNCPMHNLIFRARGRSYR 367

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ELP+RL EFG+VYR E SG +HGL RVRG TQDDAH++CT+EQM +E   +   ++ + +
Sbjct: 368 ELPLRLFEFGTVYRYEKSGVVHGLTRVRGLTQDDAHIYCTQEQMRDELRSLLRFVLDLLR 427

Query: 417 DFGFEKIMVKLSTR-PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           DFG     ++LST+ PEK VGSD +W++A   ++ V +       + +   +  G  AFY
Sbjct: 428 DFGLNDFYLELSTKDPEKYVGSDEVWEEATRTLREVAEA------ENLELVLDPGGAAFY 481

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK     +DAIGR WQ  TIQ+DFNLP  F   Y  +   +  PVMIHRA+FGSIERF 
Sbjct: 482 GPKISVQARDAIGRTWQMSTIQLDFNLPELFELEYQAADGTRKRPVMIHRALFGSIERFF 541

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
           G+++E++ G  P WL+P+Q +   IT + V Y Q++A  L+   + +E D  ++ +  KI
Sbjct: 542 GVLVEHYAGAFPPWLAPVQVVGIPITEAHVPYLQDVAKRLRERRIRVEVDASDDRMQKKI 601

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           R     K+P +++ GDK+ +  ++  R         V +  AI
Sbjct: 602 RNAQKAKVPYMLLAGDKDVAAGAVSFRYRNGEQKNGVPIDQAI 644


>gi|297195484|ref|ZP_06912882.1| threonyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC
           25486]
 gi|197722098|gb|EDY66006.1| threonyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 657

 Score =  492 bits (1266), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 272/664 (40%), Positives = 388/664 (58%), Gaps = 49/664 (7%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEI 61
           SD+++     S +   V  TG+  A+       +  VA  + G++ DLS   ++G  +E 
Sbjct: 2   SDVRVIIQRDSEREERVVTTGTTAADLFPE---RTVVAARVGGELKDLSYEPKDGEEVEP 58

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +       L ++RHS AH+MA+AVQ ++PE ++ IGP ++DGFYYDFD E+PF  D+L  
Sbjct: 59  VEISSEDGLNILRHSTAHVMAQAVQELFPEAKLGIGPPVKDGFYYDFDVEKPFHPDDLKA 118

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE-------------SIPAK 168
           IEKKMQEI  R   F ++ ++ E ARE  E   E YK+E++               + A 
Sbjct: 119 IEKKMQEIQKRGQRFSRRVVTDEAARE--ELADEPYKLELIGLKGSASSDDGADVEVGAG 176

Query: 169 ENVTLY-----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIY 221
           E +T+Y     + GE  W DLCRGPH+ +T  +  F KLM+ A AYWRG    PML RIY
Sbjct: 177 E-LTIYDNLDAKTGELCWKDLCRGPHLPTTRNIPAF-KLMRNAAAYWRGSEKNPMLQRIY 234

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLI 280
           GTAW +++EL  +L FL E+EKRDHRKL  E+DLF I E  GSG+  +H KG  I + + 
Sbjct: 235 GTAWPSKEELKAHLEFLAEAEKRDHRKLGSELDLFSIPEQIGSGLAVFHPKGGIIRRVME 294

Query: 281 SYMRRKIKDD-YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPM 339
            Y R++ +++ YE + TP      L++ SGH D Y   M+     D+ +     + LKPM
Sbjct: 295 DYSRKRHEEEGYEFVYTPHATKGKLFETSGHLDWYADGMYPPMQLDEGVD----YYLKPM 350

Query: 340 NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQ 399
           NCP H  +F+   +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDDAH++CTKEQ
Sbjct: 351 NCPMHNLIFDARGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYCTKEQ 410

Query: 400 MFNECLKIHNLIISIYKDFGFEKIMVKLSTR-PEKRVGSDALWDDAENIMKGVLDTIKNS 458
           M +E       ++++ +D+G     ++LST+ PEK VGSD +W++A   ++ V +     
Sbjct: 411 MADELDSTLTFVLNLLRDYGLTDFYLELSTKDPEKFVGSDEVWEEATETLRQVAE----- 465

Query: 459 SQDRINTGVLL----GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH 514
                  G+ L    G  AFYGPK     KDAIGR WQ  T+Q+DFNLP RF+  Y    
Sbjct: 466 -----KQGLPLVPDPGGAAFYGPKISVQAKDAIGRTWQMSTVQLDFNLPERFDLEYTGPD 520

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANL 574
             K  PVMIHRA+FGSIERF  +++E++ G +P WL+P+QA+   I  + VEY Q+ A  
Sbjct: 521 GTKHRPVMIHRALFGSIERFFAVLLEHYAGAMPPWLAPVQAVGIPIGDAHVEYLQDFAAD 580

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
            K   L +E D  ++ +  KIR     K+P +II GD + +  ++  R    +    +  
Sbjct: 581 AKKKGLRVEVDSSSDRMQKKIRNQQKLKVPFMIIVGDDDMNAGTVSFRYRDGSQENGIPR 640

Query: 635 LDAI 638
            DA+
Sbjct: 641 EDAL 644


>gi|163756231|ref|ZP_02163346.1| uracil phosphoribosyltransferase [Kordia algicida OT-1]
 gi|161323843|gb|EDP95177.1| uracil phosphoribosyltransferase [Kordia algicida OT-1]
          Length = 647

 Score =  492 bits (1266), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 257/655 (39%), Positives = 397/655 (60%), Gaps = 21/655 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+T PDGS++ F    T  DVA++IS   A+  ++   NG   + + P+ E GS+ + T
Sbjct: 2   IKITLPDGSVREFDSSVTPMDVAKNISEGFARNVISANFNGVTVETTTPLTEDGSLILYT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQI 122
            +D        HS AHI+A+A+  ++P+ ++ +GP I++GFYYD D  ++  +  +   I
Sbjct: 62  WKDDEGKKAFWHSSAHILAQAILELYPDAKLWVGPAIDNGFYYDVDMGDETITDKDFKTI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E KM EI      F  +  + E+A   ++ + + YKVE++E +     +T      + DL
Sbjct: 122 EDKMLEIARGKHDFKMRSATKEEALAYYKDRND-YKVELVEGL-EDGTITFCDHDTFTDL 179

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRG H+ +TG VK   K+M VAGAY++GD N   L+RIYG ++  Q+EL +YL+ LEE++
Sbjct: 180 CRGGHIPNTGIVKAV-KVMSVAGAYYKGDENNKQLTRIYGVSFPKQKELKEYLHLLEEAK 238

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           KRDHRKL +E++LF  ++  G G+  W  KG  +   L +++++ + K  YE + +P + 
Sbjct: 239 KRDHRKLGKELELFTFSQKVGQGLPLWLPKGAALRSQLENFLKKAQQKAGYEMVISPHIG 298

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            + L+  SGH+  Y  + F    A +T K+   F LKPMNCP H  ++N    SY++LP 
Sbjct: 299 QKELYVTSGHYAKYGEDSFQ---AINTPKEDEEFLLKPMNCPHHCEIYNTKPFSYKDLPK 355

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R AEFG+VYR E SG LHGL RVRGFTQDDAH+FCT +Q+  E   + +L++ +++  GF
Sbjct: 356 RYAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCTPDQLDQEFKNVIDLVMYVFESLGF 415

Query: 421 EKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           +    ++S R    PEK +GS   W+ AEN +      I  + +  +N  +  GE AFYG
Sbjct: 416 DNFTAQVSLRDPEKPEKYIGSTENWEKAENAI------INAAKEKELNYVIEYGEAAFYG 469

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK ++++KDA+GR WQ GTIQVD+NLP RF+  Y  S +E   PVMIHRA FGS+ERFI 
Sbjct: 470 PKLDFMVKDALGRSWQLGTIQVDYNLPERFDLTYKGSDNELHRPVMIHRAPFGSMERFIA 529

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           I++E+  GN PLWL   QAI+  ++     Y +++  LL++H +  + D RNET+  KIR
Sbjct: 530 ILLEHTGGNFPLWLMTEQAILLPVSEKYENYGKKVLTLLENHEIRAQIDNRNETVGKKIR 589

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           E  + K+P ++I G++E  + ++ +RR G      ++ ++A   + KE +    Q
Sbjct: 590 EAEMSKVPFMLIIGEQEEKDGTVSVRRHGVGDIGTLT-MEAFADMVKEEINNSLQ 643


>gi|111115550|ref|YP_710168.1| threonyl-tRNA synthetase [Borrelia afzelii PKo]
 gi|216263396|ref|ZP_03435391.1| threonyl-tRNA synthetase [Borrelia afzelii ACA-1]
 gi|122956324|sp|Q0SMD6|SYT_BORAP RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|110890824|gb|ABH01992.1| threonyl-tRNA synthetase [Borrelia afzelii PKo]
 gi|215980240|gb|EEC21061.1| threonyl-tRNA synthetase [Borrelia afzelii ACA-1]
          Length = 581

 Score =  492 bits (1266), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 245/571 (42%), Positives = 362/571 (63%), Gaps = 16/571 (2%)

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           RHS AH+MAEAV+ ++P  ++AIGP I+DGFYYDF+ ++  + D L  IE +M+EI+   
Sbjct: 15  RHSIAHVMAEAVRDLFPNTKIAIGPPIKDGFYYDFEFKKQITEDSLLDIENRMREILKTG 74

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQ 193
           S F K+ +S E+A E+F  K E YK++++++   +  +++Y+   + DLCRGPHV +  +
Sbjct: 75  SSFEKELISVEQALEIF--KDEPYKIDLIKNFDLQNEISIYKSHNFIDLCRGPHVDNMNK 132

Query: 194 VK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLARE 252
           +  K FKL  +AGAYWRG+    ML+RIYGT WN ++EL  YL   EE +KRDHRKL +E
Sbjct: 133 IDPKAFKLTSIAGAYWRGNEKNTMLTRIYGTLWNNEKELRSYLNLREEIKKRDHRKLGKE 192

Query: 253 MDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGH 310
           +DLF I E+ G G++F+H  G KI   +  + R +  K+ Y+ + TP +    LWQ SGH
Sbjct: 193 LDLFSIHEEIGPGLVFFHPNGAKIRALIEDFWREEHSKNGYDILFTPHIGKSWLWQTSGH 252

Query: 311 WDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYR 370
            D Y+ +MF     D +      + LKPMNCP H+A++N G  SYR+LP R AE G+VYR
Sbjct: 253 LDFYKDSMFEKMEMDKS-----DYYLKPMNCPFHIAIYNTGKHSYRDLPFRWAELGTVYR 307

Query: 371 NEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR 430
            E  G+LHG+MR RGFTQDDAH+ CT  Q+ +E  ++    I ++  FGF  +   LST+
Sbjct: 308 YEKIGALHGIMRARGFTQDDAHIICTHSQVLDEIKEVLRFAIYMWSKFGFNSLKAYLSTK 367

Query: 431 PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRD 490
           P+K VG+D+ W+ +  +++  L   +      +   +  G GAFYGPK +  + D++ R+
Sbjct: 368 PDKFVGNDSDWEMSLKVLEEALSGFE------VPYEIDKGGGAFYGPKIDLKIVDSLERE 421

Query: 491 WQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL 550
           WQ  TIQ DFNLP RFN  Y     ++  P MIHRA+ GSIERF GI+IE++ G  PLWL
Sbjct: 422 WQMSTIQFDFNLPERFNMTYTAEDGKEKRPFMIHRALLGSIERFFGILIEHYGGAFPLWL 481

Query: 551 SPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           SPIQA++  + ++  +YA ++ N  K+  + I+ D  +  +N KIRE+  KKIP + I G
Sbjct: 482 SPIQAVIIPVNNAVEDYAIKVFNKFKNEGMRIKLDNTSSRMNAKIREYQAKKIPYMFIIG 541

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           ++EA E  I IR   +     + L +A+ ++
Sbjct: 542 EREAKEEKISIRTRTNEQINGLELDEALKLI 572


>gi|29833364|ref|NP_827998.1| threonyl-tRNA synthetase [Streptomyces avermitilis MA-4680]
 gi|73919829|sp|Q827U8|SYT_STRAW RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|29610487|dbj|BAC74533.1| putative threonyl-tRNA synthetase [Streptomyces avermitilis
           MA-4680]
          Length = 658

 Score =  492 bits (1266), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 267/668 (39%), Positives = 392/668 (58%), Gaps = 46/668 (6%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEI 61
           SD+++     S +   V  TG+  A+       +  VA  + G++ DL+  V++G  +E 
Sbjct: 2   SDVRVIIQRDSEREERVVTTGTTAADLFPGE--RTVVAARVGGELKDLAYEVKDGEEVEP 59

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +       L ++RHS AH+MA+AVQ ++PE ++ IGP ++DGFYYDFD  +PF+ ++L  
Sbjct: 60  VQISSEDGLNILRHSTAHVMAQAVQELFPEAKLGIGPPVKDGFYYDFDVAKPFTPEDLKA 119

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN----------- 170
           IEKKMQEI  R   F ++ ++ E ARE  E   E YK+E++    +  N           
Sbjct: 120 IEKKMQEIQKRGQRFSRRVVTDEAARE--ELADEPYKLELIGIKGSASNDDGANVEVGSG 177

Query: 171 -VTLY-----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYG 222
            +T+Y     + G+  W DLCRGPH+ +T  +  F KLM+ A AYWRG    PML RIYG
Sbjct: 178 ELTIYDNLDAKTGDLCWKDLCRGPHLPTTRNIPAF-KLMRNAAAYWRGSEKNPMLQRIYG 236

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLIS 281
           TAW ++ EL  +L FL E+EKRDHRKL  E+DLF I +  GSG+  +H KG  + + +  
Sbjct: 237 TAWPSKDELKAHLDFLAEAEKRDHRKLGNELDLFSIPDQIGSGLAVFHPKGGIVRRVMED 296

Query: 282 YMRRKIKDD-YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
           Y RR+ +++ YE + TP      L++ SGH D Y   M+     D+ +     + LKPMN
Sbjct: 297 YSRRRHEEEGYEFVYTPHATKGKLFETSGHLDWYADGMYPPMQLDEGVD----YYLKPMN 352

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
           CP H  +F+   +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDDAH++CT+E+M
Sbjct: 353 CPMHNLIFDARGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYCTREKM 412

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTR-PEKRVGSDALWDDAENIMKGVLDTIKNSS 459
            +E  K    ++++ +D+G     ++LST+ PEK VGSD +W++A   ++ V +      
Sbjct: 413 ADELDKTLTFVLNLLRDYGLTDFYLELSTKDPEKFVGSDEVWEEATETLRQVAE------ 466

Query: 460 QDRINTGVLL----GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS 515
                 G+ L    G  AFYGPK     KDAIGR WQ  T+Q+DFNLP RF+  Y     
Sbjct: 467 ----KQGLPLVPDPGGAAFYGPKISVQAKDAIGRTWQMSTVQLDFNLPERFDLEYTGPDG 522

Query: 516 EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLL 575
            K  PVMIHRA+FGSIERF  +++E++ G  P WL+P+QA+   I  + VEY Q+ A   
Sbjct: 523 SKQRPVMIHRALFGSIERFFAVLLEHYAGAFPAWLAPVQAVGIPIGDAHVEYLQKFAAEA 582

Query: 576 KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
           K   L +E D  ++ +  KIR    +K+P ++I GD++ +  ++  R    +    + L 
Sbjct: 583 KKKGLRVEVDSSSDRMQKKIRNAQKQKVPFMVIAGDEDMTAGAVSFRYRDGSQENGIPLD 642

Query: 636 DAIPILTK 643
           +AI  + K
Sbjct: 643 EAIAKIAK 650


>gi|256788869|ref|ZP_05527300.1| threonyl-tRNA synthetase [Streptomyces lividans TK24]
          Length = 653

 Score =  492 bits (1266), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 266/633 (42%), Positives = 381/633 (60%), Gaps = 41/633 (6%)

Query: 19  VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIRHSC 77
           V  TG+  AE  +    +  +A  ++G + DL+  V++G ++E +       L ++RHS 
Sbjct: 13  VVTTGTTAAELFAGE--RSIIAARVSGDLKDLAYEVKDGETVEAVEISSEDGLDILRHST 70

Query: 78  AHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFL 137
           AH+MA+AVQ ++PE ++ IGP ++DGFYYDFD E+PF  D+L  IEKKMQEI  R   F 
Sbjct: 71  AHVMAQAVQELFPEAKLGIGPPVKDGFYYDFDVEKPFHPDDLKAIEKKMQEIQKRGQRFS 130

Query: 138 KQYLSHEKARELFESKKEAYKVEILE-------------SIPAKENVTLY-----RQGE- 178
           ++ ++ E ARE  E   E YK+E++               + A E +T+Y     + GE 
Sbjct: 131 RRVVTDEAARE--ELADEPYKLELIGLKGSASSDDGADVEVGAGE-LTIYDNLDAKTGEL 187

Query: 179 -WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
            W DLCRGPH+ +T  +  F KLM+ A AYWRG    PML RIYGTAW T+ EL  +L F
Sbjct: 188 CWKDLCRGPHLPTTRNIPAF-KLMRNAAAYWRGSEKNPMLQRIYGTAWPTKDELKAHLEF 246

Query: 238 LEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEIN 295
           L E+EKRDHRKL  E+DLF I E  GSG+  +H KG  I + +  Y RR+ +++ YE + 
Sbjct: 247 LAEAEKRDHRKLGSELDLFSIPEQIGSGLAVFHPKGGIIRRVMEDYSRRRHEEEGYEFVY 306

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP      L++ SGH D Y   M+     D+ +     + LKPMNCP H  +F+   +SY
Sbjct: 307 TPHATKGKLFETSGHLDWYADGMYPPMQLDEGVD----YYLKPMNCPMHNLIFDARGRSY 362

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP+RL EFG+VYR E SG +HGL R RGFTQDDAH++CT+EQM  E  K    ++++ 
Sbjct: 363 RELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYCTREQMSEELDKTLTFVLNLL 422

Query: 416 KDFGFEKIMVKLSTR-PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           +D+G     ++LST+ PEK VGSD  W++A   ++ V      + +  +      G  AF
Sbjct: 423 RDYGLNDFYLELSTKDPEKFVGSDEAWEEATETLRQV------AEKQNLELVADPGGAAF 476

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK     +DAIGR WQ  TIQ+DFNLP RF+  Y  +   K  PVMIHRA+FGSIERF
Sbjct: 477 YGPKISVQARDAIGRTWQMSTIQLDFNLPERFSLEYTAADGAKTRPVMIHRALFGSIERF 536

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             +++E++ G +P WL+P+QA+   +  + V+Y +E A   +   L ++ D  ++ +  K
Sbjct: 537 FAVLLEHYAGAMPPWLAPVQAVGIPVGDAHVQYLEEFAAEARRKGLRVDVDASSDRMQKK 596

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIR-RFGS 626
           IR    +K+P +II GD++    ++  R R GS
Sbjct: 597 IRTQQKQKVPFMIIVGDEDMHGGTVSFRYRDGS 629


>gi|224534482|ref|ZP_03675058.1| threonine--tRNA ligase [Borrelia spielmanii A14S]
 gi|224514159|gb|EEF84477.1| threonine--tRNA ligase [Borrelia spielmanii A14S]
          Length = 581

 Score =  491 bits (1265), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 246/571 (43%), Positives = 361/571 (63%), Gaps = 16/571 (2%)

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           RHS AH+MAEAV  ++P  ++AIGP I+DGFYYDF+ ++  + D L  IEK+M+EI+   
Sbjct: 15  RHSIAHVMAEAVCDLFPNTKIAIGPPIKDGFYYDFEFKKQITEDALLDIEKRMREILKTG 74

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQ 193
           S F K+ +S E+A E+F  K E YK++++++   +  +++Y+   + DLCRGPHV +  +
Sbjct: 75  SSFEKELISVEQALEIF--KDEPYKIDLIKNFDLQNEISIYKSHNFVDLCRGPHVDNMNK 132

Query: 194 VK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLARE 252
           +  K FKL  +AGAYWRG+    ML+RIYGT WN ++EL  YL   EE +KRDHRKL +E
Sbjct: 133 IDPKAFKLTSIAGAYWRGNEKNTMLTRIYGTLWNNEKELRSYLNLREEIKKRDHRKLGKE 192

Query: 253 MDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGH 310
           +DLF I E+ G G++F+H  G KI   +  + R +  K+ Y+ + +P +    LWQ SGH
Sbjct: 193 LDLFSIHEEIGPGLVFFHPNGAKIRALIEDFWREEHSKNGYDILFSPHIGKSWLWQTSGH 252

Query: 311 WDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYR 370
            D Y+ +MF     D +      + LKPMNCP H+A++N G  SYR+LP R AE G+VYR
Sbjct: 253 LDFYKDSMFEKIEMDKS-----DYYLKPMNCPFHIAIYNTGKHSYRDLPFRWAELGTVYR 307

Query: 371 NEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR 430
            E  G+LHG+MR RGFTQDDAH+ CT  Q+ +E  ++    I ++  FGF  +   LST+
Sbjct: 308 YEKIGALHGMMRARGFTQDDAHIICTHSQVVDEIKEVLRFAIYMWSKFGFNSLKAYLSTK 367

Query: 431 PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRD 490
           PEK VG+D+ W+ +  +++  L   K      +   +  G GAFYGPK +  + D++ R+
Sbjct: 368 PEKFVGNDSDWEMSLKVLEEALSGFK------VPYEIDKGGGAFYGPKIDLKIVDSLERE 421

Query: 491 WQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL 550
           WQ  T+Q DFNLP RFN  Y     ++  P MIHRA+ GSIERF GI+IE++ G  PLWL
Sbjct: 422 WQMSTVQFDFNLPERFNMTYTAEDGKEKRPFMIHRALLGSIERFFGILIEHYGGAFPLWL 481

Query: 551 SPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           SPIQA++  + ++  +YA ++ N  K+  + I+ D  +  +N KIRE+  KKIP + I G
Sbjct: 482 SPIQAVIIPVNNAVEDYAIKVLNKFKNEGIRIKLDNTSSRMNAKIREYQAKKIPYMFIIG 541

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           ++EA+E  I IR   +     + L +A   +
Sbjct: 542 EREATEEKISIRTRTNEQINGIKLDEAFEFI 572


>gi|332878463|ref|ZP_08446184.1| threonine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
 gi|332683558|gb|EGJ56434.1| threonine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
          Length = 647

 Score =  491 bits (1265), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 249/630 (39%), Positives = 387/630 (61%), Gaps = 20/630 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+TFPDGS++ +    TG  +AESIS  LA+  +A  +NG++ +L+ P+ E  S+ +  
Sbjct: 2   IKITFPDGSVREYEAGVTGLQIAESISSRLAQDVLACGVNGEIVELNRPINEDASVVLYK 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF--DKEQPFSSDELAQ 121
            ED        H+ AH+MAEA+Q ++P +Q  IGP IE+GFYYD            + A 
Sbjct: 62  WEDAEGKHAFWHTSAHLMAEAMQELYPGMQFGIGPAIENGFYYDVMPPAGTVIRESDFAG 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEKKM E+  R  P ++  +S   A + F  + + YK E++E +    +++ Y QG + D
Sbjct: 122 IEKKMLELAQRKEPVVRAEISKADALKFFGERGQTYKNELIEDL-EDGHISTYTQGAFTD 180

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ +TG +K   K+  V+ AYWRGD  RP ++R+Y  ++  ++ L +YL  LEE+
Sbjct: 181 LCRGPHLMNTGVIKAV-KVTAVSSAYWRGDEKRPQMTRVYAISFPKKKMLDEYLTLLEEA 239

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           +KRDHRK+ +EM+LF  +E  G G+  W  KG  +   L  ++++ + +  Y+++ TP +
Sbjct: 240 KKRDHRKIGKEMELFMFSERVGKGLPMWLPKGTALRLRLEDFLKKIQKRYGYQQVMTPHI 299

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             ++L+  SGH+  Y  + F      +  ++   + LKPMNCP H  ++    +SY++LP
Sbjct: 300 GGKNLYVTSGHYAHYGKDSFQPIHTPEADEE---YMLKPMNCPHHCEIYAWKPRSYKDLP 356

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AEFG+VYR E SG LHGL RVR FTQDDAH+FC  +Q+ +E +++  +I  I+    
Sbjct: 357 LRIAEFGTVYRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKDEFIRVMEIIQIIFGALN 416

Query: 420 FEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           F+    ++S R     EK +GSD +W++AEN +      I+   +  +N  V  GE AFY
Sbjct: 417 FDTFEAQISLRDPNNREKYIGSDEVWEEAENAI------IEACKEKGLNAKVEYGEAAFY 470

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDA+GR WQ GTIQVD+NLP RF   Y    ++K  PVMIHRA FGS+ERF 
Sbjct: 471 GPKLDFMVKDALGRRWQLGTIQVDYNLPERFKLEYTGEDNQKHRPVMIHRAPFGSMERFC 530

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE+  G+ PLWL+P Q  +  I+    +YAQ++        +    D RNE I  KI
Sbjct: 531 AVLIEHTAGHFPLWLTPDQVAILPISEKFNDYAQKLCAYFDEQDVRAIVDDRNEKIGRKI 590

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFG 625
           R++ +K+IP ++I G+KEA++ ++ +R+ G
Sbjct: 591 RDNEMKRIPYMLIVGEKEAADGTVSVRKQG 620


>gi|195941538|ref|ZP_03086920.1| threonyl-tRNA synthetase (thrZ) [Borrelia burgdorferi 80a]
 gi|312149456|gb|ADQ29527.1| threonyl-tRNA synthetase [Borrelia burgdorferi N40]
          Length = 581

 Score =  491 bits (1265), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 245/571 (42%), Positives = 359/571 (62%), Gaps = 16/571 (2%)

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           RHS AH+MAEAV  ++P  ++AIGP I+DGFYYDF+ ++  + D L  IE +M+EI+   
Sbjct: 15  RHSIAHVMAEAVLDLFPNTKIAIGPPIKDGFYYDFEFKKQITEDSLLDIENRMREILKTG 74

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQ 193
           S F K+ +S E+A E+F  K E YK++++++   +  V++Y+   + DLCRGPHV +  +
Sbjct: 75  SSFEKEIISVEQALEIF--KDEPYKIDLIKNFDLQNEVSIYKSHNFVDLCRGPHVENMNK 132

Query: 194 VK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLARE 252
           +  K FKL  +AGAYWRG    PML+RIYGT WN ++EL  YL   EE +KRDHRKL +E
Sbjct: 133 IDPKAFKLTSIAGAYWRGSEKNPMLTRIYGTLWNNEKELRSYLNLREEIKKRDHRKLGKE 192

Query: 253 MDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGH 310
           +DLF I E+ G G++F+H  G KI   +  + R +  K+ Y+ + TP +    LWQ SGH
Sbjct: 193 LDLFSIHEEIGPGLVFFHPNGAKIRALIEDFWREEHSKNGYDILFTPHIGKSWLWQTSGH 252

Query: 311 WDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYR 370
            D Y+ +MF     D +      + LKPMNCP H+A++N G  SYR+LP R AE G+VYR
Sbjct: 253 LDFYKDSMFEKIEMDKS-----DYYLKPMNCPFHIAIYNTGKHSYRDLPFRWAELGTVYR 307

Query: 371 NEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR 430
            E  G+LHG+MR RGFTQDDAH+ CT  Q+ +E  ++    I ++  FGF  +   LST+
Sbjct: 308 YEKIGALHGMMRARGFTQDDAHIICTHSQVLDEIKEVLRFAIYMWSKFGFSNLKAYLSTK 367

Query: 431 PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRD 490
           P+K VG+D+ W+ +  +++  L      S   +   +  G GAFYGPK +  + D++ R+
Sbjct: 368 PDKSVGNDSDWEMSLKVLEETL------SDFEVPYEIDKGGGAFYGPKIDLKIVDSLERE 421

Query: 491 WQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL 550
           WQ  TIQ DFNLP RFN  Y     ++  P MIHRA+ GSIERF GI++E++ G  PLWL
Sbjct: 422 WQMSTIQFDFNLPERFNMTYTAEDGKEKRPFMIHRALLGSIERFFGILVEHYGGAFPLWL 481

Query: 551 SPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           SP+Q ++  + +   +YA ++ N  K+  + I+ D  +  +N KIRE+  KKIP + I G
Sbjct: 482 SPVQVVIIPVNNIVEDYAIKVFNKFKNEGIRIKLDNSSSRMNAKIREYQAKKIPYMFIIG 541

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           ++EA+E  I IR   +     + L +A+  +
Sbjct: 542 EREATEERISIRTRTNEQINGIKLDEALKFI 572


>gi|328955410|ref|YP_004372743.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Coriobacterium
           glomerans PW2]
 gi|328455734|gb|AEB06928.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Coriobacterium
           glomerans PW2]
          Length = 643

 Score =  491 bits (1265), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 258/629 (41%), Positives = 402/629 (63%), Gaps = 17/629 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
           M   I +  PDGS +  P  +T +D+A SI   LA+ A+A  +NG++ DL+ P+  G  +
Sbjct: 1   MRDQISVRLPDGSQRELPAESTLADLAASIGAGLARAALAGKVNGEIVDLARPLACGDEV 60

Query: 60  EIITPED-PRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           EI+T      +LAV+RHS AHI+A A+  ++ +V    GP IEDGFYYD    +  S D+
Sbjct: 61  EILTNRSGADALAVLRHSAAHILAAAMAHLYGDVVFGTGPAIEDGFYYDMRLPRSISPDD 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-ENVTLYRQG 177
            + IE +M++I+A D PF+++ + +++AR L     +  K+E++    A  + +T+YR G
Sbjct: 121 FSTIEAEMKKIVAADLPFVREEVGYDEARRLL--ADQPLKLELIAEHEANGDALTIYRVG 178

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           ++ DLC GPH+ STG +K F  L K+AGAYWR +++  ML+R+YGTA+ ++++L ++L+ 
Sbjct: 179 DFIDLCAGPHLSSTGMLKAF-SLTKLAGAYWRANADNEMLTRLYGTAFFSKRDLEEHLFR 237

Query: 238 LEESEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEIN 295
           LEE+ KRDH+KL RE+ +F +  E G G+  +   G ++ + + +++ R++ +  Y+E+ 
Sbjct: 238 LEEAAKRDHKKLGRELGIFTMFDEAGPGLPLYLPAGARVIRLMETWLSRELYRRGYQEVI 297

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD--LRTFALKPMNCPGHVAVFNHGLK 353
           TP +    +W+ SGH+  YR NM+     + T ++  L  F +KPMNCPGHV ++ + L 
Sbjct: 298 TPHIYKSDVWKTSGHYGYYRDNMYFFNINEGTAEEPRLSEFGVKPMNCPGHVLIYKNDLH 357

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYRELP+R  EFG+VYR+E SG+++GL R RGFTQDDAHVFC ++Q+ +E   I + +  
Sbjct: 358 SYRELPIRYFEFGTVYRHELSGAVNGLFRARGFTQDDAHVFCREDQVIDEIDSIMDTVDF 417

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           I   F       ++STRP+K +G D +W+ AE  +   LD  +      IN G    +GA
Sbjct: 418 IMGTFEL-PYTCEISTRPDKSIGGDDMWEKAERFLAEALD--RRGIPFEINAG----DGA 470

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  +KD++GR WQC TIQVDFNLP RF+  Y  + +++  P M+HRA+FGSI+R
Sbjct: 471 FYGPKIDVKVKDSLGRTWQCSTIQVDFNLPERFDLSYRTADNDELRPWMLHRAIFGSIDR 530

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           F+GI+IE+  GN PLWL+P+Q  +  I    ++YA EI  L+++     E    NE +  
Sbjct: 531 FLGIVIEHTAGNFPLWLAPVQCAIIPIADRHLDYACEIKRLIEAAGGRAEVAEHNEPMRA 590

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIR 622
           KI     KK+P +++ GDKEA+ R++ +R
Sbjct: 591 KIARAEAKKVPYMLVVGDKEAAARTVSVR 619


>gi|89897864|ref|YP_514974.1| threonyl-tRNA synthetase [Chlamydophila felis Fe/C-56]
 gi|123722330|sp|Q256F9|SYT_CHLFF RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|89331236|dbj|BAE80829.1| threoninyl tRNA synthetase [Chlamydophila felis Fe/C-56]
          Length = 635

 Score =  491 bits (1264), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 264/615 (42%), Positives = 373/615 (60%), Gaps = 21/615 (3%)

Query: 11  DGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI-EIITPEDPRS 69
           D      P  +T +D A  I  S       V IN ++ DLS  + EG + + +T  DP  
Sbjct: 7   DNETFELPTGSTAADFASKIKNS--HYFAGVVINDQIKDLSTTLSEGDVLKFVTFTDPEG 64

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
             +  H+ AH++A+AV  +WP+    IGP+I+ GFYYDF      S D+   IE  M E 
Sbjct: 65  REIFLHTSAHMLAQAVLRLWPQAIPTIGPVIDLGFYYDF-ANLSISEDDFPAIEN-MVEQ 122

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
           IA++   + +   ++K   L E     +KVE+++  P  EN+T Y QGE+ DLCRGPH+ 
Sbjct: 123 IAKERFEISKKTFNDKQEALQEFASNPFKVELIQEFPEDENITCYSQGEFMDLCRGPHLP 182

Query: 190 STGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKL 249
           ST  VK F KL++ + AYWRGD +R  L RIYG ++ T +EL ++L+ LEE++KRDHR L
Sbjct: 183 STAPVKAF-KLLRTSAAYWRGDPSRESLVRIYGVSFPTTKELKEHLHQLEEAKKRDHRVL 241

Query: 250 AREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQS 308
             ++DLF   E  +G+ F+H +G  I+  LI Y +R  +   Y+EI TPQ++++ LW+ S
Sbjct: 242 GTKLDLFSQQECSAGMPFFHPRGMIIWDALIGYWKRLHQLAGYKEILTPQLVNRSLWEVS 301

Query: 309 GHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV 368
           GHW +Y+ NM+ +K       D   +A+KPMNCPG +  +   L SY+E P+R+AE G V
Sbjct: 302 GHWSNYKENMYTLKI------DEEDYAIKPMNCPGCMLYYKTRLHSYKEFPLRIAEIGHV 355

Query: 369 YRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLS 428
           +R E SG+L GLMRVR F QDDAHVF T EQ+  E L I NL+  +Y  FG E   ++LS
Sbjct: 356 HRYEISGALSGLMRVRAFHQDDAHVFLTPEQVEEETLNILNLVSELYSTFGLE-YHLELS 414

Query: 429 TRPEK-RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAI 487
           TRPEK  +GSD LWD A   ++  L  I +++   IN G    +GAFYGPK +  +KDAI
Sbjct: 415 TRPEKATIGSDELWDLATAALERAL--INSNTPFVINPG----DGAFYGPKIDIHVKDAI 468

Query: 488 GRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
            R WQCGTIQ+D  LP RF   Y N+  EK  P+M+HRA+FGSIERF+GI+IE+FKG  P
Sbjct: 469 QRTWQCGTIQLDMFLPERFELEYTNAQGEKSTPIMLHRALFGSIERFLGILIEHFKGRFP 528

Query: 548 LWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIII 607
           LWLSP    + T+       AQE+A   +     +  D  NE+++ KIR     ++  ++
Sbjct: 529 LWLSPEHVRLITVADRHQPRAQELATAWQQLGFVVTVDDSNESVSKKIRNAQNMQVNYMV 588

Query: 608 ICGDKEASERSIGIR 622
             GD+E  E ++ +R
Sbjct: 589 TLGDREIEENTLAVR 603


>gi|326780460|ref|ZP_08239725.1| threonyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1]
 gi|326660793|gb|EGE45639.1| threonyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1]
          Length = 658

 Score =  491 bits (1264), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 268/668 (40%), Positives = 390/668 (58%), Gaps = 46/668 (6%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           SD+++     S +   V  TG+   E       +  VA  I G++ DLS  +R+G S+E 
Sbjct: 2   SDVRVIIQRDSEREEHVVTTGTTAGELFPGQ--RTVVAARIGGELKDLSYELRDGESVEP 59

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +       L ++RHS AH+MA+AVQ ++P+ ++ IGP ++DGFYYDFD E+PF+ ++L  
Sbjct: 60  VEISSEDGLNILRHSTAHVMAQAVQELFPDAKLGIGPPVKDGFYYDFDVEKPFTPEDLKA 119

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN----------- 170
           IEKKMQEI  R   F ++ +S E ARE  E   E YK+E++    +  +           
Sbjct: 120 IEKKMQEIQKRGQKFSRRVVSDEAARE--ELADEPYKLELIGIKGSASSDDGADVEVGGG 177

Query: 171 -VTLY-----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYG 222
            +T+Y     + G+  W DLCRGPH+ +T  +  F KLM+ A AYWRG    PML RIYG
Sbjct: 178 ELTIYDNLDPKTGDLCWKDLCRGPHLPTTRFIPAF-KLMRNAAAYWRGSEKNPMLQRIYG 236

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLIS 281
           TAW T+ EL  +L FLEE+ KRDHRKL  E+DLF   ++ G G+  +H KG  I + +  
Sbjct: 237 TAWPTKDELKAHLEFLEEAAKRDHRKLGNELDLFSFPDEIGPGLAVFHPKGGVIRRAMED 296

Query: 282 YMRRKIKDD-YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
           Y RR+ +++ YE + +P      L+++SGH D Y   M+     DD +     + LKPMN
Sbjct: 297 YSRRRHEEEGYEFVYSPHATKGKLFEKSGHLDWYADGMYPPMQLDDGVD----YYLKPMN 352

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
           CP H  +F+   +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDDAH++CTKEQM
Sbjct: 353 CPMHNLIFDARGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRSRGFTQDDAHIYCTKEQM 412

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTR-PEKRVGSDALWDDAENIMKGVLDTIKNSS 459
             E  +    ++++ +D+G     ++LST+ PEK VGSD  W++A   ++ V +      
Sbjct: 413 AEELDRTLTFVLNLLRDYGLTDFYLELSTKDPEKYVGSDETWEEATETLRQVAE------ 466

Query: 460 QDRINTGVLL----GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS 515
                 G+ L    G  AFYGPK     KDAIGR WQ  T+Q+DFNLP RF+  Y     
Sbjct: 467 ----KQGLPLVPDPGGAAFYGPKISVQCKDAIGRTWQMSTVQLDFNLPERFDLEYTGPDG 522

Query: 516 EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLL 575
            K  PVMIHRA+FGSIERF  +++E++ G  P+WL+P+QA+   I  + + Y QE A   
Sbjct: 523 SKQRPVMIHRALFGSIERFFAVLLEHYAGAFPVWLAPVQAVGIPIGDAHIPYLQEFAAKA 582

Query: 576 KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
           +   L ++ D  ++ +  KIR     K+P +II GD++ +  ++  R    +    + + 
Sbjct: 583 RKQGLRVDVDASSDRMQKKIRNQQKNKVPFMIIAGDEDMANGAVSFRYRDGSQENGIPVD 642

Query: 636 DAIPILTK 643
           +AI  + K
Sbjct: 643 EAIAKIAK 650


>gi|225013012|ref|ZP_03703428.1| threonyl-tRNA synthetase [Flavobacteria bacterium MS024-2A]
 gi|225002828|gb|EEG40808.1| threonyl-tRNA synthetase [Flavobacteria bacterium MS024-2A]
          Length = 648

 Score =  491 bits (1264), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 253/641 (39%), Positives = 390/641 (60%), Gaps = 24/641 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           I++ FPD S++ +    T  ++A SIS  LA+  ++   NG++ +    + E G I++ T
Sbjct: 2   IEIQFPDQSVRTYSEGVTPFEIASSISEGLARNVLSAKFNGQIVESVTSLHENGKIQLFT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQI 122
             D        HS AH++A+A+ +++PE ++ IGP IE+GFYYD D  E   +  +L +I
Sbjct: 62  WNDQEGKTAFWHSSAHVLAQALLALYPECKLTIGPAIENGFYYDADFGEYSLTEKDLVEI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EKK  E   +   F  +  S  +A   ++ +   +K E++E++     +T     ++ DL
Sbjct: 122 EKKFLEFARQKFEFKMRSASKAEALAYYKKENNPFKTELIENL-EDGTITFCDHADFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRG H+ +TG +K   KL  +AGAYWRGD  +P L+R+YG ++  Q++LT+YL  +EE++
Sbjct: 181 CRGGHIPNTGSIKAI-KLTNIAGAYWRGDETKPQLTRVYGISFPKQKQLTEYLELVEEAK 239

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           KRDHRKL +E++LF  ++  G G+  W  KG  + + L ++++  + K  YE++ +P + 
Sbjct: 240 KRDHRKLGKELELFTFSQKVGQGLPLWLPKGAALRERLENFLKAAQNKAGYEQVISPHIG 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            + L+  SGH++ Y A+ F       T  +   F LKPMNCP H  ++N    SYR+LP 
Sbjct: 300 SKELYMTSGHYEKYGADSFQ---PIQTPAEGEEFLLKPMNCPHHCEIYNAKPWSYRDLPK 356

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R AEFG+VYR E SG LHGL RVRGFTQDDAH+FC   Q+ +E  K+ +L++ ++   GF
Sbjct: 357 RYAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCMPSQLDDEFKKVIDLVLYVFGSLGF 416

Query: 421 EKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           E    ++S R    PEK +GS   W+ AE   + +++  K  + D +   +  GE AFYG
Sbjct: 417 ENFTAQVSLRDPEKPEKYIGSTHNWELAE---QAIINAAKEKNLDYV---IETGEAAFYG 470

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK ++++KDA+GR WQ GTIQVD+NLP RF+  Y  S +E   PVMIHRA FGS+ERF+ 
Sbjct: 471 PKLDFMVKDALGRKWQLGTIQVDYNLPERFDLNYKGSDNELHRPVMIHRAPFGSLERFVA 530

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           I++E+  GN PLWL P Q  +  ++     YA +++N L++H +    D RNETI  KIR
Sbjct: 531 ILLEHTGGNFPLWLMPNQVNILCVSEKCKNYALKVSNFLENHEIRALLDDRNETIGKKIR 590

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRR-----FGSTTTQKV 632
           E  I K+P +II G+KE   +++ +R+      GS +T+ V
Sbjct: 591 ESEISKVPYMIIIGEKEEENQTVSLRKHSEGDLGSFSTESV 631


>gi|325106885|ref|YP_004267953.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Planctomyces
           brasiliensis DSM 5305]
 gi|324967153|gb|ADY57931.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Planctomyces
           brasiliensis DSM 5305]
          Length = 729

 Score =  491 bits (1264), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 265/702 (37%), Positives = 398/702 (56%), Gaps = 75/702 (10%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG------- 57
           I +T PDGS++ +    T  D+A  IS  LA   +A  +NG++ D++ P++E        
Sbjct: 2   INVTLPDGSVREYADDTTALDIARGISERLANDVIAADVNGQIADVARPLQELVDDPTSI 61

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSD 117
           S++++T +D  SL V+RHSCAHIMA AV  ++P   +A GP    GFYYDFD ++  S +
Sbjct: 62  SLKLLTVKDQASLGVMRHSCAHIMARAVMRLFPGTGLAFGPTTGHGFYYDFDLDERISEE 121

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVE-ILESIPAKENVTLYRQ 176
           +  +IE++M  II+   PF +  LS ++A EL E   +  KVE I   +    N++ YRQ
Sbjct: 122 DFPRIEQEMANIISEGEPFERFALSRDEAVELCEGMNQELKVEHIRTGLSDHGNLSFYRQ 181

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           GE+ DLCRGPH+   G++K F KL+ VAGA+W+GD +   L R+YGTAW  +++L  YL 
Sbjct: 182 GEFVDLCRGPHIPRAGKIKAF-KLLSVAGAHWKGDQSGKSLQRLYGTAWFDKKDLKNYLE 240

Query: 237 FLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEI 294
            +EE+++RDHR L + + LF I    G G+  W  KG  I   L  ++++++ +  YE +
Sbjct: 241 QIEEAKRRDHRVLGKRLHLFQIDPHVGQGLCLWLPKGATIRALLEDFIKKELLERQYEPV 300

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMF-------AVKCADDTIKDLRT-------------- 333
            +P +    L++ SGH+  YR + F       A +  D  I+ L+               
Sbjct: 301 YSPHIGRVELYETSGHFPYYRDSQFAPIFGHDAGRIIDYCIRKLQDGELSGESEQTLLQA 360

Query: 334 ---------------------------------FALKPMNCPGHVAVFNHGLKSYRELPV 360
                                            + LKPMNCP H  ++    +SYR+LPV
Sbjct: 361 AEIMGYQADDYQKANSNEEKIAALRKWEKQQERYLLKPMNCPHHAQIYKSQPRSYRDLPV 420

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLAEFG+VYR+E +G L+G++RVRG TQDDAH+FC  EQ+  E  +   L+  + K  G 
Sbjct: 421 RLAEFGTVYRHEQTGELNGMLRVRGLTQDDAHLFCMPEQVEEEFRQTLELVQFVLKSVGL 480

Query: 421 EKIMVKLSTR---PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
               V+LS R    +K VGS+  W  AE  ++ VL+      +  ++     GE AFYGP
Sbjct: 481 NDYRVQLSLRDPGSDKYVGSEENWQQAEASLRKVLN------ESGLSFTACEGEAAFYGP 534

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +++++DAIGR+WQ GT+Q+D+NLP RF   YV + ++   PVMIHRA FGS+ERF+G+
Sbjct: 535 KADFMVRDAIGREWQLGTVQLDYNLPERFELEYVGADNKMHRPVMIHRAPFGSMERFVGM 594

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE+F G  PLWL+P Q  V  +T    +YAQ++   LK        D R+  +N KIR+
Sbjct: 595 LIEHFAGAFPLWLAPEQIRVLPVTDKVADYAQDVVKRLKKEGFRTSADMRSCKVNAKIRD 654

Query: 598 HSIKKIPIIIICGDKEASERSIGIR-RFGSTTTQKVSLLDAI 638
             ++ IP +++ G KEA + ++ +R R  S     + L DAI
Sbjct: 655 AQLELIPYMLVVGPKEAEQNAVSVRDRIESADIGMMPLDDAI 696


>gi|291443408|ref|ZP_06582798.1| threonyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
 gi|291346355|gb|EFE73259.1| threonyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
          Length = 658

 Score =  491 bits (1263), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 269/668 (40%), Positives = 390/668 (58%), Gaps = 46/668 (6%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           SD+++     S +   V  TG+   E       +  VA  I G++ DLS  +++G S+E 
Sbjct: 2   SDVRVIIQRDSEREEHVVTTGTTAGELFPGQ--RTVVAARIGGELKDLSYVLQDGESVEP 59

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +       L ++RHS AH+MA+AVQ ++PE ++ IGP ++DGFYYDFD E+PF+ ++L  
Sbjct: 60  VEISSEDGLNILRHSTAHVMAQAVQELFPEAKLGIGPPVKDGFYYDFDVEKPFTPEDLKA 119

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN----------- 170
           IEKKMQEI  R   F ++ +S E ARE  E   E YK+E++    +  +           
Sbjct: 120 IEKKMQEIQKRGQKFSRRVVSDEDARE--ELANEPYKLELIGIKGSASSDDGADVEVGGG 177

Query: 171 -VTLY-----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYG 222
            +T+Y     + GE  W DLCRGPH+ +T  +  F KLM+ A AYWRG    PML RIYG
Sbjct: 178 ELTIYDNLDAKTGELCWKDLCRGPHLPTTRFIPAF-KLMRNAAAYWRGSEKNPMLQRIYG 236

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLIS 281
           TAW T+ EL  +L FLEE+ KRDHRKL  E+DLF   ++ G G+  +H KG  I + +  
Sbjct: 237 TAWPTKDELKAHLEFLEEAAKRDHRKLGNELDLFSFPDEIGPGLAVFHPKGGVIRRAMED 296

Query: 282 YMRRKIKDD-YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
           Y RR+ +++ YE + +P      L+++SGH D Y   M+     DD +     + LKPMN
Sbjct: 297 YSRRRHEEEGYEFVYSPHATKGKLFEKSGHLDWYADGMYPPMQLDDGVD----YYLKPMN 352

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
           CP H  +F+   +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDDAH++CTKEQM
Sbjct: 353 CPMHNLIFDARGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRSRGFTQDDAHIYCTKEQM 412

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTR-PEKRVGSDALWDDAENIMKGVLDTIKNSS 459
             E  +    ++++ +D+G     ++LST+ PEK VGSD  W++A   ++ V +      
Sbjct: 413 AEELDRTLTFVLNLLRDYGLTDFYLELSTKDPEKYVGSDETWEEATATLQQVAE------ 466

Query: 460 QDRINTGVLL----GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS 515
                 G+ L    G  AFYGPK     KDAIGR WQ  T+Q+DFNLP RF+  Y     
Sbjct: 467 ----KQGLPLVPDPGGAAFYGPKISVQCKDAIGRTWQMSTVQLDFNLPERFDLEYTGPDG 522

Query: 516 EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLL 575
            K  PVMIHRA+FGSIERF  +++E++ G  P+WL+P+QA+   I  + + Y QE A   
Sbjct: 523 SKQRPVMIHRALFGSIERFFAVLLEHYAGAFPVWLAPVQAVGIPIGDAHIPYLQEFAAKA 582

Query: 576 KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
           +   L ++ D  ++ +  KIR     K+P +II GD++ +  ++  R    +    + + 
Sbjct: 583 RKQGLRVDVDASSDRMQKKIRNQQKNKVPFMIIAGDEDMANGAVSFRYRDGSQENGIPVD 642

Query: 636 DAIPILTK 643
           +AI  + K
Sbjct: 643 EAIAKIAK 650


>gi|216264494|ref|ZP_03436486.1| threonyl-tRNA synthetase [Borrelia burgdorferi 156a]
 gi|215980967|gb|EEC21774.1| threonyl-tRNA synthetase [Borrelia burgdorferi 156a]
          Length = 581

 Score =  491 bits (1263), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 245/571 (42%), Positives = 359/571 (62%), Gaps = 16/571 (2%)

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           RHS AH+MAEAV  ++P  ++AIGP I+DGFYYDF+ ++  + D L  IE +M+EI+   
Sbjct: 15  RHSIAHVMAEAVLDLFPNTKIAIGPPIKDGFYYDFEFKKQITEDSLLDIENRMREILKTG 74

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQ 193
           S F K+ +S E+A E+F  K E YK++++++   +  V++Y+   + DLCRGPHV +  +
Sbjct: 75  SSFEKEIISVEQALEIF--KDEPYKIDLIKNFDLQNEVSIYKSHNFVDLCRGPHVENMNK 132

Query: 194 VK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLARE 252
           +  K FKL  +AGAYWRG    PML+RIYGT WN ++EL  YL   EE +KRDHRKL +E
Sbjct: 133 IDPKAFKLTSIAGAYWRGSEKNPMLTRIYGTLWNNEKELRSYLNLREEIKKRDHRKLGKE 192

Query: 253 MDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGH 310
           +DLF I E+ G G++F+H  G KI   +  + R +  K+ Y+ + TP +    LWQ SGH
Sbjct: 193 LDLFSIHEEIGPGLVFFHPNGAKIRALIEDFWREEHSKNGYDILFTPHIGKSWLWQTSGH 252

Query: 311 WDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYR 370
            D Y+ +MF     D +      + LKPMNCP H+A++N G  SYR+LP R AE G+VYR
Sbjct: 253 LDFYKDSMFEKIEMDKS-----DYYLKPMNCPFHIAIYNTGKHSYRDLPFRWAELGTVYR 307

Query: 371 NEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR 430
            E  G+LHG+MR RGFTQDDAH+ CT  Q+ +E  ++    I ++  FGF  +   LST+
Sbjct: 308 YEKIGALHGMMRARGFTQDDAHIICTHSQVLDEIKEVLRFAIYMWSKFGFSNLKAYLSTK 367

Query: 431 PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRD 490
           P+K VG+D+ W+ +  +++  L      S   +   +  G GAFYGPK +  + D++ R+
Sbjct: 368 PDKSVGNDSDWEMSLKVLEETL------SDFEVPYEIDKGGGAFYGPKIDLKIVDSLERE 421

Query: 491 WQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL 550
           WQ  TIQ DFNLP RFN  Y     ++  P MIHRA+ GSIERF GI++E++ G  PLWL
Sbjct: 422 WQMSTIQFDFNLPERFNMTYTAEDGKEKRPFMIHRALLGSIERFFGILVEHYGGAFPLWL 481

Query: 551 SPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           SP+Q ++  + +   +YA ++ N  K+  + I+ D  +  +N KIRE+  KKIP + I G
Sbjct: 482 SPVQVVIIPVNNIVEDYAIKVFNKFKNEGIRIKLDNSSSRMNAKIREYQAKKIPYMFIIG 541

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           ++EA+E  I IR   +     + L +A+  +
Sbjct: 542 EREATEERISIRTRTNEQINGMKLDEALKFI 572


>gi|255035014|ref|YP_003085635.1| threonyl-tRNA synthetase [Dyadobacter fermentans DSM 18053]
 gi|254947770|gb|ACT92470.1| threonyl-tRNA synthetase [Dyadobacter fermentans DSM 18053]
          Length = 647

 Score =  491 bits (1263), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 252/651 (38%), Positives = 396/651 (60%), Gaps = 19/651 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEI 61
           S +K+T PDGS + +P   T  ++A SIS  LA+  +A  +N +V D +  + E S +++
Sbjct: 5   SQVKITLPDGSERFYPKGVTALEIALSISEGLARNVIAAKVNNEVWDPTRQITEDSLVKL 64

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELA 120
           +T  D    A   HS AH++AEA+++++P ++   GP IE GFYYD D   Q  S ++  
Sbjct: 65  LTWNDEDGKATFWHSSAHLLAEALEALYPGIKFGTGPSIEKGFYYDVDLGGQTISQEDFP 124

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IE KM E+  + + ++++ +S  +A + F  K + YK+E+++ +    ++TLY QG + 
Sbjct: 125 KIEAKMLELARQKNEYIRKPISKAEAIDYFTQKGDEYKLELIDGL-EDGSITLYEQGSFT 183

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ +TG +K   KL  +AGAYWR      ML+RIYG  +  Q+EL +Y+  +EE
Sbjct: 184 DLCRGPHIPNTGFIKAA-KLTNIAGAYWRNKQENKMLTRIYGITFPKQKELEEYVTLMEE 242

Query: 241 SEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           ++KRDHR+L +E++LF  +E  G G+  W  KG  + + L +++ + + +  Y  + TP 
Sbjct: 243 AKKRDHRRLGKELELFAFSEKVGQGLPLWLPKGAMLRERLQAFLSKAQSRAGYVPVITPH 302

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +  + L+  SGHWD Y  + F      +  ++   + LKPMNCP H  ++    +SY++L
Sbjct: 303 IGSKDLYVTSGHWDKYGKDSFQPIKTPNLDEE---YMLKPMNCPHHCEIYKTSPRSYKDL 359

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R +EFG+VYR E SG LHGL RVRGFTQDDAH+FC  +Q+  E +++ +L++ ++K  
Sbjct: 360 PLRFSEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCRPDQVKEEFIRVIDLVLYVFKSL 419

Query: 419 GFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           GF     ++S R     EK +G D  W+      K     I+ +++  ++T   LGE AF
Sbjct: 420 GFNDYSAQISLRDPNNKEKYIGKDEDWE------KAESAIIEAAAERGLSTVTELGEAAF 473

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +++++DA+GR WQ GTIQVD+ LP RF   Y  S ++K  PVMIHRA FGS+ERF
Sbjct: 474 YGPKLDFMVRDALGRKWQLGTIQVDYQLPQRFQLEYTGSDNQKHRPVMIHRAPFGSMERF 533

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             I+IEN  G  PLWLSP Q  +  I+    +YA+E+   L+ H +    D R+E I  K
Sbjct: 534 TAILIENTAGQFPLWLSPDQIAILPISEKFADYAEEVFFQLQDHDIRGFVDHRDEKIGRK 593

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           IR+  + K+P ++I G+KEA+E  + +RR G      +++ +      KE+
Sbjct: 594 IRDAEVTKVPFMLIVGEKEAAEGKLSVRRKGEGDLGSMTIEEFAAFFKKEA 644


>gi|299135910|ref|ZP_07029094.1| threonyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8]
 gi|298602034|gb|EFI58188.1| threonyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8]
          Length = 680

 Score =  491 bits (1263), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 263/662 (39%), Positives = 384/662 (58%), Gaps = 57/662 (8%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAV------------------------- 39
           IK+  PDGS++      +  D+A SIS  LA   V                         
Sbjct: 2   IKIQLPDGSVREVAKGTSPLDIANSISPRLAAAVVVARVRSLQPTTDGATTETETTAATE 61

Query: 40  ---------AVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIW 89
                      A   ++ DL+ P+ E  ++E++   DP +L V+RHS AH+MA A+  ++
Sbjct: 62  TQSEEAMYGGAAQAERLVDLTTPLTEDVALELLKETDPATLRVVRHSAAHVMATAILELF 121

Query: 90  PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKAREL 149
           PE ++  GP  ++GF+YD  +E PF+  +LA IE+KM E++ARD  F++     EK    
Sbjct: 122 PETKLGHGPATDNGFFYDVYREVPFTEADLASIEQKMAEVVARDEKFVRVEEPREKGLTD 181

Query: 150 FESKKEAYKVEILESI--PAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAY 207
           + ++ E  KV  +E    P  E ++LY+ G + D CRGPHV ST +VK F K+M +AGAY
Sbjct: 182 YAAQGEFMKVHFIERFTKPGDE-ISLYKNGNFTDFCRGPHVPSTSRVKAF-KVMSIAGAY 239

Query: 208 WRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAE-DGSGVI 266
           W GD     L RIYGTA+  Q++L  +   LEE + RDHR L +++DLF I E  G+G+I
Sbjct: 240 WLGDEKNQQLQRIYGTAFFNQKDLDAHFKHLEEIKARDHRVLGKQLDLFSIQEVAGAGLI 299

Query: 267 FWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD 325
           FWH KG  I +T+  +MR + ++  Y  + TP ++ + LW+ SGH   Y  NM+     D
Sbjct: 300 FWHPKGGLIRKTMEDWMRAECVRRGYNLVVTPHIMRRELWKISGHEGYYSDNMYPPMELD 359

Query: 326 DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRG 385
           D       + LKPMNCPGH+ ++ +  KSYR+LPVR AE G+VYR E SG++HGL+RVRG
Sbjct: 360 DA-----EYRLKPMNCPGHILIYKNSPKSYRDLPVRYAELGNVYRYERSGTMHGLLRVRG 414

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST----RPEKRVGSDALW 441
           FTQDDAH+FCT +Q+ +E +       S+   FGF    V+LST    +P+   GS   W
Sbjct: 415 FTQDDAHIFCTPDQIEDEVVACIEFAQSVLTTFGFADFKVELSTWDPKKPQDYTGSADHW 474

Query: 442 DDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFN 501
             A N +K  L       +  I    + GE AFYGPK +  L D +GR WQ  T+Q DFN
Sbjct: 475 ATAINSLKTAL------GRKNIPFVEIPGEAAFYGPKIDVKLVDVLGRLWQLSTVQFDFN 528

Query: 502 LPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT 561
           LP+RF   Y+    E+  PVM+HRA+FGS+ERF G++IE++ G  P+WL+P+Q  +  I+
Sbjct: 529 LPARFELEYIGEDGERHRPVMVHRALFGSVERFFGVLIEHYAGAFPMWLAPVQVGLVPIS 588

Query: 562 SSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
           +   + YA+ +   L++  L +E D  N  +N KIR+  ++K P I++ GDKEA+  S+ 
Sbjct: 589 NEKHLAYAESVKARLEAAGLRVELDGGNGKMNAKIRDFGLQKFPFILVLGDKEAASDSVS 648

Query: 621 IR 622
           +R
Sbjct: 649 VR 650


>gi|294673346|ref|YP_003573962.1| threonine--tRNA ligase [Prevotella ruminicola 23]
 gi|294474289|gb|ADE83678.1| threonine--tRNA ligase [Prevotella ruminicola 23]
          Length = 648

 Score =  491 bits (1263), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 254/631 (40%), Positives = 387/631 (61%), Gaps = 20/631 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           I +TFPDGS++++    TG  +AESIS +LA+  V+  +NG+  +L+ P+ E  +IE+  
Sbjct: 3   INITFPDGSVRSYEQGVTGFQIAESISPALARSVVSCGVNGETVELNRPINEDATIELYK 62

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF---DKEQPFSSDELA 120
            +D +      H+ AH++AEA+Q ++P +Q   GP +E+GF+YD    D E    SD   
Sbjct: 63  FDDEQGKHTFWHTSAHLLAEALQELYPGIQFGFGPAVENGFFYDVLLKDGESIKESD-FP 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IE KM+E+  +  P +++ +   +A + F    + YK E +E      ++T Y QG + 
Sbjct: 122 KIEAKMKELAGKKEPVVRREVPKAEALKQFAEWGQTYKCEHIEQDLEDGSITTYTQGNFT 181

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+  TG++K   KL  VAGA+WRGD+NR  + R+YG ++  ++ L +YL  LEE
Sbjct: 182 DLCRGPHLVDTGEIKAV-KLTSVAGAFWRGDANREQMQRLYGISFPKKKMLDEYLEMLEE 240

Query: 241 SEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++KRDHRK+ +EM+LF  +E  G G+  W  KG ++   L  ++R+  K   Y+E+ TP 
Sbjct: 241 AKKRDHRKIGKEMELFMFSEKVGKGLPIWLPKGTELRLRLQDHLRKVQKRFGYQEVITPH 300

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +  ++L+  SGH+  Y  + F       T ++   + LKPMNCP H  +F    +SYR+L
Sbjct: 301 IGSKNLYVTSGHYAHYGKDSFQ---PIHTPEEDEEYMLKPMNCPHHCEIFAWKPRSYRDL 357

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG+VYR E SG LHGL RVR FTQDDAH+FC  +Q+  E L + ++I  +   F
Sbjct: 358 PLRIAEFGTVYRYEQSGELHGLTRVRSFTQDDAHLFCRPDQVKQEFLNVMDIIGIVLTAF 417

Query: 419 GFE---KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           GF    +I ++     +K VG+D  W  AE  +      ++   +  +   V  GE AFY
Sbjct: 418 GFNFEAQISLRDPNDHDKYVGTDEDWALAEKAI------VEACQEKGLPAKVEYGEAAFY 471

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDAIGR WQ GTIQVD+NLP RFN  Y +  ++K  PVMIHRA FGS+ERF 
Sbjct: 472 GPKLDFMIKDAIGRRWQLGTIQVDYNLPKRFNLEYTDEDNQKKTPVMIHRAPFGSMERFC 531

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE+  G+ PLWL+P Q  +  ++    +YAQE+A       +    D RNE +  KI
Sbjct: 532 AVLIEHTSGHFPLWLTPDQVAILPLSEKYNDYAQEVAKKFDMGGVRATVDMRNEKLGRKI 591

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGS 626
           R++ +K+IP ++I G+KEA+E ++ +R  G 
Sbjct: 592 RDNELKRIPYMVIVGEKEAAEGTVAVRPQGG 622


>gi|224531616|ref|ZP_03672248.1| threonyl-tRNA synthetase [Borrelia valaisiana VS116]
 gi|224511081|gb|EEF81487.1| threonyl-tRNA synthetase [Borrelia valaisiana VS116]
          Length = 581

 Score =  491 bits (1263), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 245/571 (42%), Positives = 360/571 (63%), Gaps = 16/571 (2%)

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           RHS AH+MAEAV  ++P  ++AIGP I+DGFYYDF+ ++  + D L  IE +M+EI+   
Sbjct: 15  RHSIAHVMAEAVLDLFPNTKIAIGPPIKDGFYYDFEFKKQITEDSLLDIENRMREILKTG 74

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQ 193
           S F K+ +S E+A E+F  K E YK++++++   +  +++Y+   + DLCRGPHV +  +
Sbjct: 75  SSFEKEIISVEQAFEIF--KDEPYKIDLIKNFDLQNEISIYKSHNFVDLCRGPHVDNMNK 132

Query: 194 VK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLARE 252
           +  K FKL  +AGAYWRG+    ML+RIYGT WN ++EL  YL   EE +KRDHRKL +E
Sbjct: 133 IDPKAFKLTGIAGAYWRGNEKNTMLTRIYGTLWNNEKELRSYLNLREEIKKRDHRKLGKE 192

Query: 253 MDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGH 310
           +DLF I E+ G G++F+H  G KI   +  + R +  K+ Y+ + TP V    LWQ SGH
Sbjct: 193 LDLFSIHEEVGPGLVFFHPNGAKIRSLIEDFWREEHSKNGYDILFTPHVGKSWLWQTSGH 252

Query: 311 WDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYR 370
            D Y+ +MF     D +      + LKPMNCP H+A++N G  SYR+LP R AE G+VYR
Sbjct: 253 LDFYKDSMFEKIEMDKS-----DYYLKPMNCPFHIAIYNTGKHSYRDLPFRWAELGTVYR 307

Query: 371 NEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR 430
            E  G+LHG+MR RGFTQDDAH+ CT  Q+ +E  ++    I ++  FGF  +   LST+
Sbjct: 308 YEKIGALHGMMRARGFTQDDAHIICTHSQVVDEIKEVLRFAIYMWNKFGFNSLKAYLSTK 367

Query: 431 PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRD 490
           P+K VG+DA W+ +  +++  L      S   +   +  G GAFYGPK +  + D++ R+
Sbjct: 368 PDKSVGNDADWEMSLKVLEETL------SDFEVPYEIDKGGGAFYGPKIDLKIVDSLERE 421

Query: 491 WQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL 550
           WQ  TIQ DFNLP RFN  Y     ++  P MIHRA+ GSIERF GI++E++ G  PLWL
Sbjct: 422 WQMSTIQFDFNLPERFNMTYTADDGKEKRPFMIHRALLGSIERFFGILVEHYGGAFPLWL 481

Query: 551 SPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           SP+QA++  + ++  +YA ++ N  K+  + I+ D  +  +N KIRE+  KKIP + I G
Sbjct: 482 SPVQAVIIPVNNTVEDYAIKVLNKFKNEGIRIKLDNSSSRMNAKIREYQAKKIPYMFIIG 541

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           ++E +E  I IR   +     + L +A+  +
Sbjct: 542 EREVAEERISIRTRTNEQINGIELNEALKFI 572


>gi|119485182|ref|ZP_01619567.1| threonyl-tRNA synthetase [Lyngbya sp. PCC 8106]
 gi|119457410|gb|EAW38535.1| threonyl-tRNA synthetase [Lyngbya sp. PCC 8106]
          Length = 608

 Score =  490 bits (1262), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 250/584 (42%), Positives = 365/584 (62%), Gaps = 16/584 (2%)

Query: 51  SDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK 110
           + P +   I +    +  +L  IRH+ +HIMA AVQ ++P+ QV IGP IE+GFYYDFD 
Sbjct: 8   ASPEQPEKIHLPKTSESETLKKIRHTASHIMAMAVQKLFPKAQVTIGPWIENGFYYDFDS 67

Query: 111 EQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN 170
            +PF+  +L  I+K+M +II R  P +++ LS E+A+   E   E YK+EILE +  ++ 
Sbjct: 68  PEPFTEKDLKAIQKEMAKIIKRKLPVVREELSREEAKRRIEELGEPYKLEILEGL--EDP 125

Query: 171 VTLYRQGE-WFDLCRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQ 228
           +T+Y  G+ W+DLC GPHV +T  +  K  +L  +AGAYWRGD  +  L RIYGTAW T 
Sbjct: 126 ITIYYLGDGWWDLCAGPHVENTADIHPKAIELESLAGAYWRGDETKAQLQRIYGTAWETP 185

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-K 286
           ++L +Y    EE+ KRDHRKL +E+ LF  A+  G G+  W  KG  +  TL  ++++ +
Sbjct: 186 EQLAEYKRRKEEALKRDHRKLGKELGLFIFADVVGPGLPLWTPKGTVLRSTLEDFLKKEQ 245

Query: 287 IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL-RTFALKPMNCPGHV 345
           +K  Y  + TP +    L++ SGHW  YR +MF +   D+    L + F LKPMNCP H+
Sbjct: 246 LKRGYLPVVTPHIGRIDLFKASGHWQQYREDMFPMMAEDEEAAKLEQGFVLKPMNCPFHI 305

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            ++   L+SYRELP+RLAEFG+VYR E SG L GL RVRGFT DD+H+F T EQ+ +E L
Sbjct: 306 QIYKSELRSYRELPIRLAEFGTVYRYEQSGELGGLTRVRGFTVDDSHLFVTPEQLESEFL 365

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTR-PE--KRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
            + +LI+S++          +LS R PE  K +GSD +W+ AE+ +   ++T++      
Sbjct: 366 NVVDLILSVFGKLKLSNFKARLSFRDPESDKYIGSDQVWNKAESAITKAVETLE------ 419

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
           ++  + +GE AFYGPK ++I +D + R+WQ GT+QVD+NLP RF+  YV     +  PVM
Sbjct: 420 MDHFLGIGEAAFYGPKLDFIFQDVLDREWQLGTVQVDYNLPERFDLEYVAEDGTRQRPVM 479

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSI 582
           IHRA FGS+ER IGI+IE + G+ PLWL+PIQ  +  ++   + Y QE+   ++S  +  
Sbjct: 480 IHRAPFGSLERLIGILIEQYAGDFPLWLAPIQVRLLAVSDEFLTYTQEVVEKMRSLDIRA 539

Query: 583 ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS 626
           E D   E +  +IR    +KIP++ I G KE    S+ IR   S
Sbjct: 540 EVDRSRERLGKQIRNAEKEKIPVMAIIGAKEVEANSLSIRTRAS 583


>gi|37522455|ref|NP_925832.1| threonyl-tRNA synthetase [Gloeobacter violaceus PCC 7421]
 gi|73919794|sp|Q7NCU0|SYT_GLOVI RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|35213456|dbj|BAC90827.1| threonyl-tRNA synthetase [Gloeobacter violaceus PCC 7421]
          Length = 627

 Score =  490 bits (1262), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 253/599 (42%), Positives = 366/599 (61%), Gaps = 17/599 (2%)

Query: 32  RSLAKKAVAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE 91
           R+L+ +  A+  +   C       E   +I+   DP  L  IRHS +HI+A AVQ ++PE
Sbjct: 9   RTLSGRFGALKCHNGGCSCDSKAMEN--DILRQSDPEKLHRIRHSTSHILAMAVQKLFPE 66

Query: 92  VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFE 151
            +V IGP IE+GFYYDFD+  PF+ ++L +IEK+M+ I+ +  P +++ +  E  RE  E
Sbjct: 67  TKVTIGPAIENGFYYDFDRPTPFTPEDLKKIEKEMRRIVQQKLPLVREEVPREAMRERLE 126

Query: 152 SKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQV-KKFFKLMKVAGAYWRG 210
           +  E YK+E+ E       V+LYR G+W+DLC GPHV ST ++    FKL  VAGAYWRG
Sbjct: 127 ALGEPYKLELFEGFDHDAPVSLYRTGDWWDLCAGPHVESTAEIHPNAFKLRSVAGAYWRG 186

Query: 211 DSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAE-DGSGVIFWH 269
           D  R  L RIYGTAW T ++L ++L   EE++KRDHRKL RE+ LF  ++  G G+  W 
Sbjct: 187 DEKRAQLQRIYGTAWETPEQLEEFLRREEEAKKRDHRKLGRELGLFVFSDLVGPGLPLWT 246

Query: 270 RKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTI 328
            KG  +   L  ++R+ ++K  Y+++ TP +    L++ SGHW  Y+ +MF +    +  
Sbjct: 247 PKGALLRYILEEFLRKEQVKRGYQQVVTPHIARVDLFKTSGHWFKYKDDMFPLMATSEEE 306

Query: 329 KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQ 388
                F +KPMNCP H+ ++   L SYRELP+RLAEFG+VYR E SG L GL RVRGFT 
Sbjct: 307 GAEEGFVMKPMNCPFHIQIYKSELHSYRELPIRLAEFGTVYRYEQSGELGGLTRVRGFTV 366

Query: 389 DDAHVFCTKEQMFNECLKIHNLIISIYKDF----GFEKIMVKLSTRPEKRVGSDALWDDA 444
           DD+H+F T EQ+ +E  K+ +LI  +++      GF   +       +K +GSDA W+ A
Sbjct: 367 DDSHLFVTPEQLDDEFKKVVDLIQFVFRSLQLGDGFSARLSFRDPTSDKYIGSDAAWEKA 426

Query: 445 ENIMKGVLDTIKNSSQD-RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLP 503
           +         I  +SQD  +   V  GE AFYGPK ++I +DA+GR+WQ GT+QVD+ LP
Sbjct: 427 QA-------AILKASQDLGLKYFVAEGEAAFYGPKLDFIFRDALGREWQLGTVQVDYILP 479

Query: 504 SRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSS 563
            RF   YV     +  PVMIHRA FGS+ERFI I+IE+F G+ PLWL+P Q  +  +T  
Sbjct: 480 ERFELEYVAEDGSRRRPVMIHRAPFGSLERFIAILIEHFAGDFPLWLAPEQVRILPVTDQ 539

Query: 564 AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
            V YA+ + + L S  +  E D  +E +  KIR     K+P++++ G+ EA+  ++ +R
Sbjct: 540 FVGYAESVKDRLVSLEMRAEVDASSERLGKKIRNGETAKVPVLLVVGESEANSGTVAVR 598


>gi|224532379|ref|ZP_03673009.1| threonine--tRNA ligase [Borrelia burgdorferi WI91-23]
 gi|224512686|gb|EEF83057.1| threonine--tRNA ligase [Borrelia burgdorferi WI91-23]
          Length = 581

 Score =  490 bits (1262), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 245/571 (42%), Positives = 359/571 (62%), Gaps = 16/571 (2%)

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           RHS AH+MAEAV  ++P  ++AIGP I+DGFYYDF+ ++  + D L  IE +M+EI+   
Sbjct: 15  RHSIAHVMAEAVLDLFPNTKIAIGPPIKDGFYYDFEFKKQITEDSLLDIENRMREILKTG 74

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQ 193
           S F K+ +S E+A E+F  K E YK++++++   +  V++Y+   + DLCRGPHV +  +
Sbjct: 75  SSFEKEIISVEQALEIF--KDEPYKIDLIKNFDLQNEVSIYKSHNFVDLCRGPHVENMNK 132

Query: 194 VK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLARE 252
           +  K FKL  +AGAYWRG    PML+RIYGT WN ++EL  YL   EE +KRDHRKL +E
Sbjct: 133 IDPKAFKLTSIAGAYWRGSEKNPMLTRIYGTLWNNEKELRSYLNLREEIKKRDHRKLGKE 192

Query: 253 MDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGH 310
           +DLF I E+ G G++F+H  G KI   +  + R +  K+ Y+ + TP +    LWQ SGH
Sbjct: 193 LDLFSIHEEIGPGLVFFHPNGAKIRALIEDFWREEHSKNGYDILFTPHIGKSWLWQTSGH 252

Query: 311 WDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYR 370
            D Y+ +MF     D +      + LKPMNCP H+A++N G  SYR+LP R AE G+VYR
Sbjct: 253 LDFYKDSMFEKIEMDKS-----DYYLKPMNCPFHIAIYNTGKHSYRDLPFRWAELGTVYR 307

Query: 371 NEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR 430
            E  G+LHG+MR RGFTQDDAH+ CT  Q+ +E  ++    I ++  FGF  +   LST+
Sbjct: 308 YEKIGALHGMMRARGFTQDDAHIICTHSQVLDEIKEVLRFAIYMWSKFGFSNLKAYLSTK 367

Query: 431 PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRD 490
           P+K VG+D+ W+ +  +++  L      S   +   +  G GAFYGPK +  + D++ R+
Sbjct: 368 PDKSVGNDSDWEMSLKVLEETL------SDFEVPYEIDKGGGAFYGPKIDLKIVDSLERE 421

Query: 491 WQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL 550
           WQ  TIQ DFNLP RFN  Y     ++  P MIHRA+ GSIERF GI++E++ G  PLWL
Sbjct: 422 WQMSTIQFDFNLPERFNMTYTAEDGKEKRPFMIHRALLGSIERFFGILVEHYGGAFPLWL 481

Query: 551 SPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           SP+Q ++  + +   +YA ++ N  K+  + I+ D  +  +N KIRE+  KKIP + I G
Sbjct: 482 SPVQVVIIPVNNIVEDYAIKVFNKFKNGGIRIKLDNSSSRMNAKIREYQAKKIPYMFIIG 541

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           ++EA+E  I IR   +     + L +A+  +
Sbjct: 542 EREATEERISIRTRTNEQINGIKLDEALKFI 572


>gi|29840712|ref|NP_829818.1| threonyl-tRNA synthetase [Chlamydophila caviae GPIC]
 gi|33301681|sp|Q821I3|SYT_CHLCV RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|29835062|gb|AAP05696.1| threonyl-tRNA synthetase [Chlamydophila caviae GPIC]
          Length = 635

 Score =  490 bits (1262), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 262/609 (43%), Positives = 375/609 (61%), Gaps = 21/609 (3%)

Query: 17  FPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIRH 75
            P  AT +D A  I  S       V IN ++ DLS  + EG ++  +T ED     +  H
Sbjct: 13  LPKGATAADFASKIKNS--HYFAGVVINDQIKDLSTTLNEGDTLRFVTFEDSEGREIFLH 70

Query: 76  SCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSP 135
           + AHI+A+AV  +WP+    IGP+I  GFYYDF      S ++L  IE  M++I+     
Sbjct: 71  TSAHILAQAVLRLWPQAVPTIGPVINQGFYYDF-ANLSVSEEDLLAIENMMEQIVQEKLE 129

Query: 136 FLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVK 195
             K+  +  K   L E    A+K E+++ +P  E++T Y QGE+ DLCRGPH+ ST  VK
Sbjct: 130 VSKKTFNG-KEEALKEFMHNAFKAELIQELPEGESITAYSQGEFMDLCRGPHLPSTAPVK 188

Query: 196 KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDL 255
            F KL++ + AYWRGD +R  L RIYG ++ T +EL ++L+ LEE++KRDHR L  ++DL
Sbjct: 189 AF-KLLRTSAAYWRGDPSRESLVRIYGISFPTTKELKEHLHQLEEAKKRDHRVLGAKLDL 247

Query: 256 FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSY 314
           F   E  +G+ F+H +G  ++  LI Y +R  +   Y++I TPQ++++ LW+ SGHW +Y
Sbjct: 248 FSQQECSAGMPFFHPRGMIVWDALIGYWQRLHQLAGYKQILTPQLMNRSLWETSGHWSNY 307

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
           +ANM+ +K       D   +A+KPMNCPG +  +   L SY+E P+R+AE G V+R E S
Sbjct: 308 KANMYTLKI------DEEDYAIKPMNCPGCMLYYKTRLHSYKEFPLRIAEIGHVHRYEVS 361

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK- 433
           G+L GLMRVR F QDDAHVF T EQ+  E L I NL+  +Y  FG E   ++LSTRPEK 
Sbjct: 362 GALSGLMRVRAFHQDDAHVFLTPEQVEEETLNILNLVSELYSTFGLE-YHLELSTRPEKD 420

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
            +GSD LW+ A + ++  L  I +++   IN G    +GAFYGPK +  +KDAI R WQC
Sbjct: 421 TIGSDELWELATSALERAL--INSNTPFIINPG----DGAFYGPKIDIHVKDAIQRTWQC 474

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI 553
           GTIQ+D  LP RF   Y N+  EK  P+M+HRA+FGSIERF+GI+IE+FKG  PLWLSP 
Sbjct: 475 GTIQLDMFLPERFELEYTNAQGEKSTPIMLHRALFGSIERFLGILIEHFKGKFPLWLSPE 534

Query: 554 QAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
              + T+      +A+E+A   +   L +  D  NE+++ KIR     ++  ++  GD+E
Sbjct: 535 HIRLITVADRHQPHAKELAAAWQKLGLVVTVDDSNESVSKKIRNAQNMQVNYMVTLGDRE 594

Query: 614 ASERSIGIR 622
             E ++ IR
Sbjct: 595 IEENTLAIR 603


>gi|317969695|ref|ZP_07971085.1| threonyl-tRNA synthetase [Synechococcus sp. CB0205]
          Length = 590

 Score =  490 bits (1262), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 252/559 (45%), Positives = 351/559 (62%), Gaps = 21/559 (3%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           L  IRHS +H+MA AVQ ++P+ QV IGP  E+GFYYDFD   PF+  +L  I+K+M ++
Sbjct: 12  LLRIRHSMSHVMAMAVQRLFPKAQVTIGPWTENGFYYDFDNPDPFTEADLKAIKKEMIKL 71

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE-WFDLCRGPHV 188
           I +  P  +  +S  +A    +++ E YK+EIL  I  +E ++LY  GE W+DLC GPHV
Sbjct: 72  INKKLPLERLEVSRAEAESRIQAQNEPYKLEILAGI--QEPISLYTLGEDWWDLCAGPHV 129

Query: 189 RSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHR 247
            +T ++  K F L  VAGAYWRGD N   L RIYGTAW T ++L++Y    EE+++RDHR
Sbjct: 130 SNTKELNAKAFDLESVAGAYWRGDENNAQLQRIYGTAWETPEQLSEYKRRQEEAKRRDHR 189

Query: 248 KLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYMRRKI--KDDYEEINTPQVLDQHL 304
           ++  ++DLF I  E G+G++FWH +G ++ + LI  + R++     YE + TP V D  L
Sbjct: 190 RIGTDLDLFSIEDEAGAGLVFWHPRGARM-RLLIENLWRELHFNAGYELLYTPHVADISL 248

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W+ SGH D Y  +MF     D+     R + LKPMNCP HV  +   L+SYRELP+R AE
Sbjct: 249 WKTSGHLDFYSESMFGPMQVDE-----REYQLKPMNCPFHVLTYASTLRSYRELPIRWAE 303

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
            G+VYR E  G +HGLMRVRGFTQDDAHVFC  EQ+ +E L I +L   I   F F    
Sbjct: 304 LGTVYRYERPGVMHGLMRVRGFTQDDAHVFCLPEQISDEILAILDLTEQILSTFDFRNYE 363

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD-RINTGVLLGEGAFYGPKFEYIL 483
           + LSTRPEK +G DA+WD A    +G+++ ++      +I+ G     GAFYGPK +  +
Sbjct: 364 INLSTRPEKSIGEDAVWDLA---TQGLIEALERKGWAYKIDEG----GGAFYGPKIDLKI 416

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +DAIGR WQC T+Q+DFNLP RF+  YV +   +  P+MIHRA+FGS+ERF GIM EN+ 
Sbjct: 417 EDAIGRMWQCSTVQLDFNLPERFDLEYVAADGSRQRPIMIHRAIFGSLERFFGIMTENYA 476

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G+ P WL+P Q  +  +T     YA+ +A  LK+  +    D   + +   IR     KI
Sbjct: 477 GDFPFWLAPEQIRLLPVTDEVTGYAESVAAALKAAGVRASVDHSGDRLGKLIRNGEQMKI 536

Query: 604 PIIIICGDKEASERSIGIR 622
           P++ + G KEA   +I +R
Sbjct: 537 PVLGVIGAKEAEGGTISLR 555


>gi|163788630|ref|ZP_02183075.1| N-acetylmuramic acid-6-phosphate etherase [Flavobacteriales
           bacterium ALC-1]
 gi|159875867|gb|EDP69926.1| N-acetylmuramic acid-6-phosphate etherase [Flavobacteriales
           bacterium ALC-1]
          Length = 646

 Score =  490 bits (1261), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 258/647 (39%), Positives = 399/647 (61%), Gaps = 24/647 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           IK+T PDGS+++F    T  +VA  IS   A+  ++   +  V + + P+  +GS+ + T
Sbjct: 2   IKITLPDGSVRSFEKEVTPHEVAVDISEGFARNVISAKFDDTVVETTTPLTTDGSLTLYT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQI 122
             D        HS AH++A+A++ ++P+V++ +GP I++GFYYD D  E   S  +   I
Sbjct: 62  FRDDEGKKAFWHSSAHVLAQALEELYPDVKLWVGPAIDNGFYYDVDLGEGVISEKDFKTI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E KM EI      F  + +S  +A   ++SK   YKV+++E +     ++      + DL
Sbjct: 122 ENKMIEIARGKHDFKMRDVSKAEALSYYKSKNN-YKVDLIEGL-EDGTISFCDHSTFTDL 179

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRG H+ +TG +K   K++ VAGAY++GD N   L+R+YG ++  Q+ELT++L+ LEE++
Sbjct: 180 CRGGHIPNTGIIKAV-KILSVAGAYYKGDENEKQLTRVYGVSFPKQKELTEHLHLLEEAK 238

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           KRDHRKL +E++LF  ++  G G+  W  KG  + + L ++++  + K  YE + TP + 
Sbjct: 239 KRDHRKLGKELELFTFSQKVGQGLPLWLPKGAALRERLENFLKAAQKKAGYEMVVTPHIG 298

Query: 301 DQHLWQQSGHWDSYRANMFA-VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            + L+  SGH+  Y  + F  +K    T K+   F LKPMNCP H  ++N+   SY+ELP
Sbjct: 299 QKELYVTSGHYAKYGEDSFQPIK----TPKEDEEFLLKPMNCPHHCEIYNNKPYSYKELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
            R AEFG+VYR E SG LHGL RVRGFTQDDAH+FCT +Q+  E  ++ +L++ ++   G
Sbjct: 355 KRFAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCTPDQLDAEFKEVIDLVLYVFGSLG 414

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDR-INTGVLLGEGAF 474
           FE    ++S R    P+K +G +  W  AE       D I N++ D+ +N  V  GE AF
Sbjct: 415 FEDFTAQVSLRDPESPDKYIGDEEHWKKAE-------DAILNAAIDKGLNYVVETGEAAF 467

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +++++DA+GR WQ GTIQVD+ LP RF+  Y  S +E   PVMIHRA FGS+ERF
Sbjct: 468 YGPKLDFMVRDALGRQWQLGTIQVDYTLPERFDLTYKGSDNELHRPVMIHRAPFGSMERF 527

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
           I I++E+  GN PLWL P QAI+ +I+    +YA+++ NLL++  +    D RNET+  K
Sbjct: 528 IAILLEHTGGNFPLWLMPEQAIIISISEKYEKYAEKVLNLLENDEIRALADNRNETVGKK 587

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           IRE  ++K P +II G++EA + +I +R+ G      +++ D + I+
Sbjct: 588 IREAEMQKFPFMIIVGEQEAQDNTITVRQHGGEDLGTITVKDFVNIV 634


>gi|121535635|ref|ZP_01667441.1| threonyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
 gi|121305805|gb|EAX46741.1| threonyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
          Length = 513

 Score =  490 bits (1261), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 243/520 (46%), Positives = 334/520 (64%), Gaps = 15/520 (2%)

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M++I+  D P  +  +S E+A  LF  + E YKVE++  +P    ++LYRQGE+ DLC G
Sbjct: 1   MEKIVKEDMPVERMEVSREEALRLFTEQGEVYKVELIRDLPEDVTISLYRQGEFIDLCAG 60

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV STG+VK   KL  +AGAYWRGD  R ML RIYGTA+  + +L  YL  LEE+ KRD
Sbjct: 61  PHVPSTGRVKAI-KLQSLAGAYWRGDEKRKMLQRIYGTAFEKKADLDAYLRMLEEAAKRD 119

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHL 304
           HRKL RE+DLF I ++G G  F+H KG  I   L ++ R+  +K  Y+EI TP +L Q L
Sbjct: 120 HRKLGRELDLFSIQDEGPGFPFFHPKGMVIRNELENFWRKLHVKYGYQEIKTPIILHQRL 179

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           WQQSGHWD YR NM+       T  D   +A+KPMNCPG + V+     SYR+LP+R  E
Sbjct: 180 WQQSGHWDHYRENMYF------TTIDGEGYAVKPMNCPGGILVYRTQHHSYRDLPLRTCE 233

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
            G V+R+E SG+LHGLMRVR FTQDDAH+F    Q+ +E   + +L   +Y  FG     
Sbjct: 234 LGLVHRHELSGALHGLMRVRSFTQDDAHIFMLPSQIKDEIQGVIDLFNEVYSTFGL-TYH 292

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
            +LST+PEK +GSD +W+ A N ++  L+  +     +IN G    +GAFYGPK ++ L+
Sbjct: 293 AELSTKPEKAMGSDEIWEVATNALREALE--ERGMPYKINEG----DGAFYGPKIDFHLR 346

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D+IGR WQCGTIQ+D  +P +F+  YV    +K  PVMIHR  +GS+ERFIGI+IE++ G
Sbjct: 347 DSIGRTWQCGTIQLDMLMPEKFDLTYVGEDGQKHRPVMIHRVAYGSLERFIGILIEHYAG 406

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P WL+P+Q  +  IT   V YAQE+A L++S  + +E D RNE I YKIRE  ++K+P
Sbjct: 407 AFPTWLAPVQVKILPITDRHVAYAQEVATLMRSKDIRVEVDSRNEKIGYKIREGQLEKVP 466

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            ++I GDKE   R++ +R+ G       ++ D +  +  E
Sbjct: 467 YMLIVGDKETETRTVAVRKRGQGDIGAQAVDDFVAAILAE 506


>gi|242046134|ref|XP_002460938.1| hypothetical protein SORBIDRAFT_02g037830 [Sorghum bicolor]
 gi|241924315|gb|EER97459.1| hypothetical protein SORBIDRAFT_02g037830 [Sorghum bicolor]
          Length = 648

 Score =  490 bits (1261), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 265/623 (42%), Positives = 381/623 (61%), Gaps = 45/623 (7%)

Query: 7   LTFPD---GSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIEIIT 63
           L FP     S + FP  A  S    S S  + + + A A  G          E  + + T
Sbjct: 35  LEFPPRRPASSRRFPYTAVRSSSTASPSAPVEEASAAAAPTGDE-------EEERVVLPT 87

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            E   +L  IRH+                 V IGP IE+GFYYDFD E P +  +L +I+
Sbjct: 88  NESSETLLRIRHT-----------------VTIGPWIENGFYYDFDME-PLTDKDLKKIK 129

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE-WFDL 182
           K+M  II ++ P +++ +S E+A++  E+  E YK+EILESI  +E +T+Y  GE W+DL
Sbjct: 130 KEMDRIIRQNLPLVREEVSREEAQKRIEALNEPYKLEILESI-KEEPITIYHIGEEWWDL 188

Query: 183 CRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           C GPHV STG++ +K  +L  VAGAYWRGD    ML RIYGTAW  + +L  Y++F EE+
Sbjct: 189 CAGPHVESTGKINRKAVELESVAGAYWRGDEKNQMLQRIYGTAWENEDQLKAYIHFKEEA 248

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTL-ISYMRRKIKDDYEEINTPQV 299
           ++RDHR+L +++DLF I +D G G++FWH KG  I   L  S+ +  ++  Y+ + TP V
Sbjct: 249 KRRDHRRLGQDLDLFSIQDDAGGGLVFWHPKGAIIRHILEDSWKQIHLQHGYDLLYTPHV 308

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               LW+ SGH D Y+ +M+     +D +     + L+PMNCP H+ V+   L SYR+ P
Sbjct: 309 AKADLWKISGHIDFYKESMYNQMDVEDEM-----YQLRPMNCPYHILVYKRKLHSYRDFP 363

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G+VYR E SGSLHGL RVRGFTQDDAH+FC ++Q+ +E   + +L   I   FG
Sbjct: 364 IRVAELGTVYRYELSGSLHGLFRVRGFTQDDAHIFCLEDQIKDEIRGVLDLTEQILGQFG 423

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F    + LSTRPEK VG+D +W+ A   +K  LD      + +++ G     GAFYGPK 
Sbjct: 424 FRYYEINLSTRPEKSVGTDDIWEKATIALKNALD--DKGWEYKVDEG----GGAFYGPKI 477

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +  ++DA+GR WQC T+QVDFNLP RF+  YV+S+SEK  P+MIHRA+ GS+ERF G++I
Sbjct: 478 DLKIEDALGRKWQCSTVQVDFNLPERFDITYVDSNSEKKRPIMIHRAILGSLERFFGVLI 537

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E++ G+ PLWL+P QA +  +T + ++Y  E+A+ LKS  L +E     E +   IR   
Sbjct: 538 EHYAGDFPLWLAPTQARILPVTDNELQYCNEVASELKSRGLRVEV-CHGERLPKLIRNAE 596

Query: 600 IKKIPIIIICGDKEASERSIGIR 622
            +K+P++ + G KE   R++ IR
Sbjct: 597 TQKVPLMAVVGPKEVQARTLTIR 619


>gi|88809590|ref|ZP_01125097.1| threonyl-tRNA synthetase [Synechococcus sp. WH 7805]
 gi|88786340|gb|EAR17500.1| threonyl-tRNA synthetase [Synechococcus sp. WH 7805]
          Length = 611

 Score =  489 bits (1260), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 251/558 (44%), Positives = 347/558 (62%), Gaps = 19/558 (3%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           L  IRHS +H+MA AVQ ++P+ +V IGP  E GFYYDFD   PF+  +L  I+K M +I
Sbjct: 34  LLKIRHSMSHVMAMAVQQLFPQARVTIGPWTESGFYYDFDNPDPFTEADLKAIKKGMIKI 93

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE-WFDLCRGPHV 188
           I +  P  +  +S  +A    +++ E YK+EILE +  +E +TLY  GE W+DLC GPHV
Sbjct: 94  INKKLPLERVEVSRSQAEAKIKAQNEPYKLEILEGL--QEPITLYTLGEDWWDLCAGPHV 151

Query: 189 RSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHR 247
             TGQ+  K F+L  VAGAYWRGD  +  L RIYGTAW T ++L ++    EE+ +RDHR
Sbjct: 152 DHTGQLNAKAFELESVAGAYWRGDETKAQLQRIYGTAWETPEQLAEHKRRKEEALRRDHR 211

Query: 248 KLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLW 305
           ++ +++DLF I  E G+G++FWH +G ++   +  + R+   +  YE + TP V D  LW
Sbjct: 212 RIGKDLDLFSIEDEAGAGLVFWHPRGARMRLLIEDFWRQAHFEGGYELLYTPHVADISLW 271

Query: 306 QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEF 365
           + SGH D Y  +MF     D+     R + LKPMNCP HV  +   L+SYRELP+R AE 
Sbjct: 272 KTSGHLDFYAESMFGPMQVDE-----REYQLKPMNCPFHVLTYASKLRSYRELPIRWAEL 326

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
           G+VYR E  G +HGLMRVRGFTQDDAHVFC  EQ+ +E LKI +L   I   F F    +
Sbjct: 327 GTVYRYERPGVMHGLMRVRGFTQDDAHVFCLPEQISDEILKILDLTERILSTFDFNTYEI 386

Query: 426 KLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD-RINTGVLLGEGAFYGPKFEYILK 484
            LSTRPEK +G DA+WD A    KG+++ ++      +I+ G     GAFYGPK +  ++
Sbjct: 387 NLSTRPEKSIGDDAVWDLA---TKGLIEALERKGWAYKIDEG----GGAFYGPKIDLKIE 439

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           DAIGR WQC TIQ+DFNLP RF   Y+ +   K  P+MIHRA+FGS+ERF GIM EN+ G
Sbjct: 440 DAIGRMWQCSTIQLDFNLPERFKLDYIAADGSKQRPIMIHRAIFGSLERFFGIMTENYAG 499

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
           + P WL+P Q  +  +T     YA+ + + L    +    D   + +   IR     KIP
Sbjct: 500 DYPFWLAPEQVRLLPVTDEVQPYAERLLDQLTQVGVRATIDRSGDRLGKLIRTGEQMKIP 559

Query: 605 IIIICGDKEASERSIGIR 622
           ++ + G KEA + ++ +R
Sbjct: 560 VLAVIGAKEAEQNAVSLR 577


>gi|220931402|ref|YP_002508310.1| Threonyl-tRNA synthetase [Halothermothrix orenii H 168]
 gi|219992712|gb|ACL69315.1| Threonyl-tRNA synthetase [Halothermothrix orenii H 168]
          Length = 646

 Score =  489 bits (1260), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 251/626 (40%), Positives = 383/626 (61%), Gaps = 19/626 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDP-VREGSIEIIT 63
           IK+T PDGS++ +    T  +VA SI + L + AVA  ++ K+ DL    V +  I I+T
Sbjct: 4   IKVTLPDGSVREYDPGVTIEEVAYSIGKGLGRAAVAGNVDDKLVDLDTTLVNDARISIVT 63

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +    L + RH+ AHI+A+AV+ ++  V++ IGP IE+GFYYDFD E+ FS  +L +IE
Sbjct: 64  IDSEEGLDIYRHTTAHILAQAVKRLYKNVKLGIGPTIENGFYYDFDVEESFSPSDLEKIE 123

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M++II  D P  K+ +S ++A +L + K E YKVE++E +   + V+LY QGE+ DLC
Sbjct: 124 KEMEKIIKEDLPIKKEMVSRDEALKLMKEKGEIYKVELIEEL-EDDYVSLYHQGEFIDLC 182

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG+VK F KL+  AGAYWRGD N  ML RIYGTA+  +++L ++L  LEE++K
Sbjct: 183 RGPHLPSTGKVKAF-KLLNAAGAYWRGDENNKMLQRIYGTAFQKKKQLEEHLKMLEEAKK 241

Query: 244 RDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLD 301
           RDH KL RE+DLF   E  G G+     KG K+ Q L  ++   + K  Y+   TP +  
Sbjct: 242 RDHNKLGRELDLFMTEESIGQGLPLLKPKGAKVVQILQRFVEDEEEKRGYQLTKTPYMAK 301

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             L++ SGHWD Y+ +MF +    D  KD    AL+PM CP    ++N  L+SYR+LP+R
Sbjct: 302 SDLYKISGHWDHYKEDMFIL---GDEEKDDEVLALRPMTCPFQFMIYNSKLRSYRDLPLR 358

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
            +E  +++RNE SG +HGL+RVR FT  + H+ CT EQ+  E   + NLI  + +  G E
Sbjct: 359 YSETSTLFRNEASGEMHGLIRVRQFTISEGHIICTPEQLEEEFRGVVNLINYMMETLGIE 418

Query: 422 K-IMVKLST----RPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
             I  + S       EK + +   W+++++ MK +LD +       I+     GE AFYG
Sbjct: 419 DDIWYRFSKWDPDNREKYIDNPTAWEESQDKMKNILDKLN------IDYVEAEGEAAFYG 472

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK +   ++  G++    T+Q+DF LP RF+  Y++  ++K  P +IHR   G  ER + 
Sbjct: 473 PKLDIQFRNVHGKEDTIITVQIDFALPERFDMTYIDKDNKKKRPYVIHRTSVGCYERTLA 532

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           ++IE + G  P WL+P+Q  +  ++   V+YA E+  +LK   + +E D  NE + YKIR
Sbjct: 533 MLIEKYAGAFPTWLAPVQVEIIPVSDDQVDYAYEVKGILKEAGIRVEVDDTNEKLGYKIR 592

Query: 597 EHSIKKIPIIIICGDKEASERSIGIR 622
           +  ++KIP ++I G++E   R++ +R
Sbjct: 593 QAQMEKIPYMLIVGNREVENRTVSVR 618


>gi|89891844|ref|ZP_01203345.1| threonyl-tRNA synthetase [Flavobacteria bacterium BBFL7]
 gi|89515749|gb|EAS18550.1| threonyl-tRNA synthetase [Flavobacteria bacterium BBFL7]
          Length = 648

 Score =  489 bits (1260), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 260/638 (40%), Positives = 389/638 (60%), Gaps = 19/638 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+T PDGSIK      T  DVA SIS+ LA+  ++ + NG   +   P+ E GS+ + T
Sbjct: 2   IKITLPDGSIKEMENGTTPMDVAMSISQGLARNVISASFNGIKVETKTPLTEDGSLVLFT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQI 122
             +P       HS +HIMA+A++ ++P V + IGP I++GFYYD D KE   S  ++ +I
Sbjct: 62  FSNPEGKEAFWHSTSHIMAQAIEELFPGVSLTIGPAIDNGFYYDIDFKEHSISESDIPKI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M EI      F  + +S   A + ++ +   YKVE++E++   E +T      + DL
Sbjct: 122 EARMLEIARGKHEFTMRSVSKADALQFYKDQNNPYKVELIENLTDGE-ITFCDHDTFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRG H+ +TG +K   K+M +AGAYWRGD N P L+R+YGT++  Q++L +YL  LEE++
Sbjct: 181 CRGGHIPNTGIIKAV-KIMSIAGAYWRGDENNPQLTRMYGTSFPKQKDLKEYLELLEEAK 239

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           KRDHRKL +E+ LF  ++  G G+  W  KG  + + L  ++++ + K  YE + +P + 
Sbjct: 240 KRDHRKLGKELQLFTFSQRVGQGLPLWLPKGAALRERLEDFLKKAQKKAGYEMVVSPHIG 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            + L+  SGH++ Y A+ F       T  D   F LKPMNCP H  ++     SYR+LP 
Sbjct: 300 SKELYVTSGHYEKYGADSFQ---PIKTPSDDEEFLLKPMNCPHHCEIYKSSQWSYRDLPK 356

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R AEFG+VYR E SG LHGL RVRGFTQDDAH+FC  EQ+  E   + +L++ ++   GF
Sbjct: 357 RFAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCMPEQLDKEFKAVIDLVLYVFGSLGF 416

Query: 421 EKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           E    ++S R    PEK +G    W+ AEN    ++   K+   D +   +  GE AFYG
Sbjct: 417 ENFTAQVSIRDPKKPEKYIGDTKNWEIAEN---AIISAAKDKGLDYV---IEEGEAAFYG 470

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK ++++KDA+GR WQ GTIQVD+NLP RF+ +Y  + +E   PVMIHRA FGS+ERFI 
Sbjct: 471 PKLDFMVKDALGRSWQLGTIQVDYNLPERFDLWYKGADNESHRPVMIHRAPFGSMERFIA 530

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           I++E+  GN PLWL P Q  + +++     YA+++AN L+++ +    D R ET+  KIR
Sbjct: 531 ILLEHTGGNFPLWLMPEQCTILSLSEKYENYAKQVANSLENNEIRTTIDNRAETMGKKIR 590

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           E  + K+P ++I G++E  + +I +R+ G      +S+
Sbjct: 591 EAEMNKLPYMLIVGEQEEKDGTISVRKHGGDDLGSMSV 628


>gi|260434317|ref|ZP_05788287.1| threonyl-tRNA synthetase [Synechococcus sp. WH 8109]
 gi|260412191|gb|EEX05487.1| threonyl-tRNA synthetase [Synechococcus sp. WH 8109]
          Length = 611

 Score =  489 bits (1260), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 254/570 (44%), Positives = 353/570 (61%), Gaps = 23/570 (4%)

Query: 61  IITPEDPRS--LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           ++ P+   S  L  IRHS +H+MA AVQ ++P+ +V IGP  E GFYYDFD   PF+  +
Sbjct: 23  VVLPKTSESDQLLRIRHSMSHVMAMAVQQLFPKARVTIGPWTETGFYYDFDNPDPFTEAD 82

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L  I+K M +II +  P  +  +S  +A E  +++ E YK+EILE +  +E +T+Y  GE
Sbjct: 83  LKAIKKGMIKIINKKLPLERVEVSRNEAEEKIKAQNEPYKLEILEGL--QEPITVYTLGE 140

Query: 179 -WFDLCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
            W+DLC GPHV  TGQ+  K F+L  VAGAYWRGD  +  L RIYGTAW T ++L ++  
Sbjct: 141 DWWDLCAGPHVDHTGQLNAKAFELESVAGAYWRGDETKAQLQRIYGTAWETPEQLAEHKR 200

Query: 237 FLEESEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEI 294
             EE+ +RDHR++ +++DLF I  E G+G++FWH +G ++   +  + R+   +  YE +
Sbjct: 201 RKEEALRRDHRRIGKDLDLFSIEDEAGAGLVFWHPRGARMRLLIEEFWRQAHFEGGYELL 260

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
            TP V D  LW+ SGH D Y  +MF     D+     R + LKPMNCP HV  +   L+S
Sbjct: 261 YTPHVADISLWKTSGHLDFYAESMFGPMEVDE-----REYQLKPMNCPFHVLTYASKLRS 315

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YRELP+R AE G+VYR E  G +HGLMRVRGFTQDDAHVFC  EQ+ +E LKI +L   I
Sbjct: 316 YRELPIRWAELGTVYRYERPGVMHGLMRVRGFTQDDAHVFCLPEQISDEILKILDLTERI 375

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL--GEG 472
              F F    + LSTRPEK +G D +WD A    KG+++ +     DR      +  G G
Sbjct: 376 LSSFDFSNYEINLSTRPEKSIGDDTVWDLA---TKGLIEAL-----DRKGWAYKIDEGGG 427

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           AFYGPK +  ++DAIGR WQC TIQ+DFNLP RF+  YV +   K  P+MIHRA+FGS+E
Sbjct: 428 AFYGPKIDLKIEDAIGRMWQCSTIQLDFNLPERFDLDYVAADGSKQRPIMIHRAIFGSLE 487

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
           RF GIM EN+ G+ P WL+P Q  +  +T     YA+++ + L    +    D   + + 
Sbjct: 488 RFFGIMTENYAGDYPFWLAPEQVRLLPVTDEVQPYAEQVLDQLTKAGVRATIDRSGDRLG 547

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIR 622
             IR     KIP++ + G KEA + ++ +R
Sbjct: 548 KLIRTGEQIKIPVLAVIGAKEAEQNAVSLR 577


>gi|226321417|ref|ZP_03796944.1| threonyl-tRNA synthetase [Borrelia burgdorferi Bol26]
 gi|226233213|gb|EEH31965.1| threonyl-tRNA synthetase [Borrelia burgdorferi Bol26]
          Length = 581

 Score =  489 bits (1260), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 246/571 (43%), Positives = 358/571 (62%), Gaps = 16/571 (2%)

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           RHS AH+MAEAV  ++P  ++AIGP I+DGFYYDF+ ++  + D L  IE +M+EI+   
Sbjct: 15  RHSIAHVMAEAVLDLFPNTKIAIGPPIKDGFYYDFEFKKQITEDSLLDIENRMREILKTG 74

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQ 193
           S F K+ +S E+A E+F  K E YK++++++   +  V++Y+   + DLCRGPHV +  +
Sbjct: 75  SSFEKEIISVEQALEIF--KDEPYKIDLIKNFDLQNEVSIYKSHNFVDLCRGPHVENMNK 132

Query: 194 VK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLARE 252
           +  K FKL  +AGAYWRG    PML+RIYGT WN ++EL  YL   EE +KRDHRKL +E
Sbjct: 133 IDPKAFKLTSIAGAYWRGSEKNPMLTRIYGTLWNNEKELRSYLNLREEIKKRDHRKLGKE 192

Query: 253 MDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGH 310
           +DLF I E+ G G++F+H  G KI   +  + R +  K+ Y+ + TP +    LWQ SGH
Sbjct: 193 LDLFSIHEEIGPGLVFFHPNGAKIRALIEDFWREEHSKNGYDILFTPHIGKSWLWQTSGH 252

Query: 311 WDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYR 370
            D Y+ +MF     D +      + LKPMNCP H+A++N G  SYR+LP R AE G+VYR
Sbjct: 253 LDFYKDSMFEKIEMDKS-----DYYLKPMNCPFHIAIYNTGKHSYRDLPFRWAELGTVYR 307

Query: 371 NEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR 430
            E  G+LHG+MR RGFTQDDAH+ CT  Q+ +E  ++    I ++  FGF      LST+
Sbjct: 308 YEKIGALHGMMRARGFTQDDAHIICTHSQVLDEIKEVLRFAIYMWSKFGFSNPKAYLSTK 367

Query: 431 PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRD 490
           P+K VG+D+ W+ +  ++K  L      S   +   +  G GAFYGPK +  + D++ R+
Sbjct: 368 PDKSVGNDSDWEMSLKVLKETL------SDFEVPYEIDKGGGAFYGPKIDLKIVDSLERE 421

Query: 491 WQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL 550
           WQ  TIQ DFNLP RFN  Y     ++  P MIHRA+ GSIERF GI++E++ G  PLWL
Sbjct: 422 WQMSTIQFDFNLPERFNMTYTAEDGKEKRPFMIHRALLGSIERFFGILVEHYGGAFPLWL 481

Query: 551 SPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           SP+Q ++  + +   +YA ++ N  K+  + I+ D  +  +N KIRE+  KKIP + I G
Sbjct: 482 SPVQVVIIPVNNIVEDYAIKVFNKFKNEGIRIKLDNSSSRMNAKIREYQAKKIPYMFIIG 541

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           ++EA+E  I IR   +     + L +A+  +
Sbjct: 542 EREATEERISIRTRTNEQINGMKLDEALKFI 572


>gi|193211793|ref|YP_001997746.1| threonyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327]
 gi|193085270|gb|ACF10546.1| threonyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327]
          Length = 661

 Score =  489 bits (1260), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 252/628 (40%), Positives = 379/628 (60%), Gaps = 16/628 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           + +T PDGS + FP   TG ++A SI   LAK A+   I+G+ CDL  PV R+ ++ I+T
Sbjct: 15  VTITLPDGSERTFPFGVTGLEIASSIGNKLAKAALGFTIDGRPCDLDTPVTRDAAVSIVT 74

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            + P    +  HS +H+MA A++ ++P  +   GP IE GFYYD   E  F+ D+L  IE
Sbjct: 75  FDSPEGKEIFWHSSSHLMAHAIEELFPGAKFGAGPAIEQGFYYDIACEHRFNEDDLRAIE 134

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFES-KKEAYKVEILE-SIPAKENVTLYRQGEWFD 181
            KM EI  R+    ++ +  E+A E F + +K+ YKVEILE ++     V++Y Q  + D
Sbjct: 135 AKMLEISQRNLSITREEMPREQAIEYFANERKDPYKVEILEDTLKEVPTVSVYYQDGFAD 194

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LC GPH+ STG+VK    L  ++ +YWRGDS+R  + RIYG  + + + L +++  +EE+
Sbjct: 195 LCSGPHLPSTGKVKAVL-LTNISSSYWRGDSSRETMQRIYGITFPSDKLLKEHVARMEEA 253

Query: 242 EKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQV 299
            KRDHRKL  E+ LF +  E GSG+  W   G  I   L ++++  + K  Y  + TP +
Sbjct: 254 RKRDHRKLGAELGLFMLTPEVGSGLPIWLPNGAIIRNELETFLKAEQRKRGYVPVYTPHI 313

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +  L+++SGH+  Y  + F      D       + LKPMNCP H  +++  L+SYR+LP
Sbjct: 314 GNIELYKRSGHYPYYSDSQFPPLTYKDETGREEQYLLKPMNCPHHHLIYSQTLRSYRDLP 373

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +RL EFG+VYR+E SG L+GL+R RGFTQDD+H++C  +Q+ +E     +L   ++   G
Sbjct: 374 IRLTEFGTVYRHEQSGELNGLVRARGFTQDDSHIYCRPDQLVDEICNAIDLTRFVFNTLG 433

Query: 420 FEKIMVKLSTR-PE---KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           F+ +  +LS   PE   K  G+  +W+ AE  +K   D +       I   + +GE +FY
Sbjct: 434 FDDVETRLSLHDPENQSKYGGTAEVWEQAEKDVKEAADRMG------IKYFIGIGEASFY 487

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++I++DAIGR WQ GT+QVD+ +P RF+  Y+ S  +K  PV+IHRA FGS+ERFI
Sbjct: 488 GPKIDFIVRDAIGRKWQLGTVQVDYVMPERFDLSYIGSDGQKHRPVVIHRAPFGSMERFI 547

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
           G++IE+  GN PLWL+P+Q  V  I     +YA+E+   L +  +  E D R+E I  KI
Sbjct: 548 GVLIEHTAGNFPLWLAPVQVAVLPIAEDVHDYAREVYAKLHAAGIRAELDLRSEKIGKKI 607

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRR 623
           RE  + KIP ++I G  E  +  + +RR
Sbjct: 608 REAEVSKIPAMLIIGRNEQEKGEVSLRR 635


>gi|78212568|ref|YP_381347.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Synechococcus
           sp. CC9605]
 gi|123756917|sp|Q3AKU0|SYT_SYNSC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|78197027|gb|ABB34792.1| threonyl-tRNA synthetase [Synechococcus sp. CC9605]
          Length = 611

 Score =  489 bits (1259), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 260/594 (43%), Positives = 362/594 (60%), Gaps = 24/594 (4%)

Query: 61  IITPEDPRS--LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           ++ P+   S  L  IRHS +H+MA AVQ ++P+ +V IGP  E GFYYDFD   PF+  +
Sbjct: 23  VVLPKTSESDQLLKIRHSMSHVMAMAVQQLFPKARVTIGPWTETGFYYDFDNPDPFTEAD 82

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L  I+K M +II +  P  +  +S  +A E  +++ E YK+EIL+ +   E +TLY  GE
Sbjct: 83  LKAIKKGMIKIINKKLPLQRVEVSRNEAEEKIKAQNEPYKLEILQGL--HEPITLYTLGE 140

Query: 179 -WFDLCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
            W+DLC GPHV  TGQ+  K F+L  +AGAYWRGD  +  L RIYGTAW + ++L ++  
Sbjct: 141 DWWDLCAGPHVDHTGQLNAKAFELESLAGAYWRGDETKAQLQRIYGTAWESPEQLAEHKR 200

Query: 237 FLEESEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEI 294
             EE+ +RDHR++ +++DLF I  E G+G++FWH +G +I   +  + R+   +  YE +
Sbjct: 201 RKEEALRRDHRRIGKDLDLFSIEDEAGAGLVFWHPRGARIRLLIEEFWRQAHFEGGYELL 260

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
            TP V D  LW+ SGH D Y  +MF     D+     R + LKPMNCP HV  +   L+S
Sbjct: 261 YTPHVADISLWKTSGHLDFYAESMFGPMEVDE-----REYQLKPMNCPFHVLTYASKLRS 315

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YRELP+R AE G+VYR E  G +HGLMRVRGFTQDDAHVFC  EQ+ +E LKI +L   I
Sbjct: 316 YRELPIRWAELGTVYRYERPGVMHGLMRVRGFTQDDAHVFCLPEQISDEILKILDLTERI 375

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD-RINTGVLLGEGA 473
              F F    + LSTRPEK +G DA+WD A    KG+++ ++      +I+ G     GA
Sbjct: 376 LSAFDFSNYEINLSTRPEKSIGEDAVWDLA---TKGLIEALERKGWAYKIDEG----GGA 428

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  ++DAIGR WQC TIQ+DFNLP RF   Y+ +   K  P+MIHRA+FGS+ER
Sbjct: 429 FYGPKIDLKIEDAIGRMWQCSTIQLDFNLPERFELDYIAADGSKQRPIMIHRAIFGSLER 488

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           F GIM EN+ G+ P WL+P Q  +  +T     YA+++ + L    +    D   + +  
Sbjct: 489 FFGIMTENYAGDYPFWLAPEQVRLLPVTDEVQPYAEQLLDQLTKAGVRATVDRSGDRLGK 548

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGI--RRFGSTTTQKVS-LLDAIPILTKE 644
            IR     KIP++ + G KEA + ++ +  RR G      VS LL A  +   E
Sbjct: 549 LIRTGEQMKIPVLAVIGAKEAEQNAVSLRSRRDGDLGVTAVSDLLSAAQMANSE 602


>gi|239939977|ref|ZP_04691914.1| threonyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
 gi|239986461|ref|ZP_04707125.1| threonyl-tRNA synthetase [Streptomyces roseosporus NRRL 11379]
          Length = 653

 Score =  489 bits (1259), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 262/635 (41%), Positives = 378/635 (59%), Gaps = 44/635 (6%)

Query: 36  KKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           +  VA  I G++ DLS  +++G S+E +       L ++RHS AH+MA+AVQ ++PE ++
Sbjct: 28  RTVVAARIGGELKDLSYVLQDGESVEPVEISSEDGLNILRHSTAHVMAQAVQELFPEAKL 87

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            IGP ++DGFYYDFD E+PF+ ++L  IEKKMQEI  R   F ++ +S E ARE  E   
Sbjct: 88  GIGPPVKDGFYYDFDVEKPFTPEDLKAIEKKMQEIQKRGQKFSRRVVSDEDARE--ELAN 145

Query: 155 EAYKVEILESIPAKEN------------VTLY-----RQGE--WFDLCRGPHVRSTGQVK 195
           E YK+E++    +  +            +T+Y     + GE  W DLCRGPH+ +T  + 
Sbjct: 146 EPYKLELIGIKGSASSDDGADVEVGGGELTIYDNLDAKTGELCWKDLCRGPHLPTTRFIP 205

Query: 196 KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDL 255
            F KLM+ A AYWRG    PML RIYGTAW T+ EL  +L FLEE+ KRDHRKL  E+DL
Sbjct: 206 AF-KLMRNAAAYWRGSEKNPMLQRIYGTAWPTKDELKAHLEFLEEAAKRDHRKLGNELDL 264

Query: 256 FHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHLWQQSGHWDS 313
           F   ++ G G+  +H KG  I + +  Y RR+ +++ YE + +P      L+++SGH D 
Sbjct: 265 FSFPDEIGPGLAVFHPKGGVIRRAMEDYSRRRHEEEGYEFVYSPHATKGKLFEKSGHLDW 324

Query: 314 YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP 373
           Y   M+     DD +     + LKPMNCP H  +F+   +SYRELP+RL EFG+VYR E 
Sbjct: 325 YADGMYPPMQLDDGVD----YYLKPMNCPMHNLIFDARGRSYRELPLRLFEFGTVYRYEK 380

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR-PE 432
           SG +HGL R RGFTQDDAH++CTKEQM  E  +    ++++ +D+G     ++LST+ PE
Sbjct: 381 SGVVHGLTRSRGFTQDDAHIYCTKEQMAEELDRTLTFVLNLLRDYGLTDFYLELSTKDPE 440

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL----GEGAFYGPKFEYILKDAIG 488
           K VGSD  W++A   ++ V +            G+ L    G  AFYGPK     KDAIG
Sbjct: 441 KYVGSDETWEEATATLQQVAE----------KQGLPLVPDPGGAAFYGPKISVQCKDAIG 490

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPL 548
           R WQ  T+Q+DFNLP RF+  Y      K  PVMIHRA+FGSIERF  +++E++ G  P+
Sbjct: 491 RTWQMSTVQLDFNLPERFDLEYTGPDGSKQRPVMIHRALFGSIERFFAVLLEHYAGAFPV 550

Query: 549 WLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIII 608
           WL+P+QA+   I  + + Y QE A   +   L ++ D  ++ +  KIR     K+P +II
Sbjct: 551 WLAPVQAVGIPIGDAHIPYLQEFAAKARKQGLRVDVDASSDRMQKKIRNQQKNKVPFMII 610

Query: 609 CGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            GD++ +  ++  R    +    + + +AI  + K
Sbjct: 611 AGDEDMANGAVSFRYRDGSQENGIPVDEAIAKIAK 645


>gi|188994826|ref|YP_001929078.1| threonyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277]
 gi|238691475|sp|B2RJD6|SYT_PORG3 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|188594506|dbj|BAG33481.1| threonyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277]
          Length = 653

 Score =  489 bits (1259), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 258/649 (39%), Positives = 398/649 (61%), Gaps = 20/649 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+TFPDG+ + +    TG D+A SIS  L +  +A  +NG+V DL  P+ E   +++  
Sbjct: 2   IKITFPDGNFREYEAGITGWDIAGSISPRLQQDVLAAGVNGQVWDLHRPINEDAEVKLFK 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFS--SDELAQ 121
            +D        HS AH+MAEA++ ++P ++  IGP IE+GFYYD D  +  S    +L  
Sbjct: 62  WDDAEGKHAFWHSSAHLMAEALEELYPGIKFGIGPAIENGFYYDVDPGEGISIKDADLPA 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK+MQ++ AR    +++ ++   A  +F  K + YKVE++  + A   +T Y QG + D
Sbjct: 122 IEKRMQDLAARKETIIRRDIAKADALRMFGDKDDQYKVELISEL-ADGTITTYTQGGFTD 180

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ +TG +K   KL+ VAGAYWRGD  R  L+RIYG ++  ++ L +YL  LEE+
Sbjct: 181 LCRGPHLPNTGYIKAI-KLLSVAGAYWRGDEKRKQLTRIYGISFPKKKMLDEYLELLEEA 239

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQV 299
           +KRDHRK+ +E++LF  +++ G+G+  W  +G ++   L  ++++  K   Y+++ TP +
Sbjct: 240 KKRDHRKIGKELELFAFSQNVGAGLPLWLPRGTQLRLRLEDFLKQIQKHFGYQQVITPHI 299

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +++L+  SGH+  Y  + F      +T ++   F LKPMNCP H  +F     SYR+LP
Sbjct: 300 GNKNLYITSGHYAKYGQDSFR---PINTPQEGEEFMLKPMNCPHHCEIFKITPHSYRDLP 356

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +RLAEFG+VYR E SG LHGL RVRGFTQDDAH+FC  +Q+  E  K+ ++I  I+K   
Sbjct: 357 IRLAEFGTVYRYEQSGELHGLTRVRGFTQDDAHLFCRPDQLKEEFCKVMDIIFIIFKALD 416

Query: 420 FEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           F+    ++S R     EK +GS+  W+ AE  +      I+   +  +   +  GE AFY
Sbjct: 417 FKNFEAQISLRDKVNREKYIGSEENWERAERAI------IEACEEKGLPAVIEYGEAAFY 470

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDA+GR WQ GTIQVD+NLP RF+  Y    ++K  PVMIHRA FGS+ERF+
Sbjct: 471 GPKLDFMVKDALGRRWQLGTIQVDYNLPERFDLEYTGEDNKKHRPVMIHRAPFGSMERFV 530

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE+  G  PLWL+P Q +V  ++    EYA  +A  L    + ++ D RNE +  KI
Sbjct: 531 AVLIEHTAGKFPLWLTPDQVVVLPVSERFNEYAHRVAKELNQRDIRVQVDDRNEKVGRKI 590

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R++ +K+IP ++I G+ E+ E  + +R+ G      + +     ++ KE
Sbjct: 591 RDNELKRIPYMLIVGENESREEEVSVRKQGEGDMGIMKITTFAELIEKE 639


>gi|322379034|ref|ZP_08053437.1| threonyl-tRNA synthetase [Helicobacter suis HS1]
 gi|322380800|ref|ZP_08054906.1| threonyl-tRNA synthetase [Helicobacter suis HS5]
 gi|321146804|gb|EFX41598.1| threonyl-tRNA synthetase [Helicobacter suis HS5]
 gi|321148526|gb|EFX43023.1| threonyl-tRNA synthetase [Helicobacter suis HS1]
          Length = 601

 Score =  489 bits (1258), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 247/588 (42%), Positives = 362/588 (61%), Gaps = 19/588 (3%)

Query: 37  KAVAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAI 96
           + + V   G V DL     E    I     P +L +IRHSCAH++A+A++ ++P+ Q  +
Sbjct: 3   EVIGVKKGGLVLDLQSEDLEAGEAIYFDNSPPALEIIRHSCAHLLAQAIKQLYPDAQFFV 62

Query: 97  GPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEA 156
           GP++++GFYYDF      S D+L  +E KMQEI  +  P LKQ +S ++A E F  K + 
Sbjct: 63  GPVVQEGFYYDFKTASKISEDDLGVVEAKMQEIAKKKHPILKQTMSRQEALERF--KNDP 120

Query: 157 YKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPM 216
            K  ++  I   ++ ++Y QGE+ DLCRGPH+  T  ++ F KL K+AGAY  GD    M
Sbjct: 121 LKHAVMSKIEG-DHFSVYTQGEFEDLCRGPHLPHTALLQHF-KLTKLAGAYLGGDEKAEM 178

Query: 217 LSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKI 275
           L+RIYG A+ T++ L +YLY LEE++KRDHRKL +E+ LF   E+ G+G+  W   G ++
Sbjct: 179 LTRIYGIAFATKEALKEYLYQLEEAKKRDHRKLGQELGLFCFDENLGAGLPIWLPNGMRL 238

Query: 276 FQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
              L + + + + +  YE +  P++L   LWQ+SGH+ +Y+ NM+       T  D   +
Sbjct: 239 RVRLENLLSKALLQYGYEPVRGPEILKSSLWQKSGHYQNYKENMYF------TTIDEVEY 292

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
            +KPMNC GH+ V+ H L+SYRELP+R  E+G V+R+E SG LHGL+RVR FTQDDAH+F
Sbjct: 293 GIKPMNCVGHIKVYEHALRSYRELPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDAHIF 352

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDT 454
           C  +Q+  E L I      +   FGFE  M +LST+P K +G D +W+ A N +K  L+ 
Sbjct: 353 CRFDQIKTEVLSILEFTKKVMGVFGFEYEM-ELSTKPAKYIGEDHIWEQATNALKQALE- 410

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH 514
                +  I+ G+  G GAFYGPK +  + DAI R WQCGT+QVD NLP+RF   Y N  
Sbjct: 411 -----EHNISFGIDAGGGAFYGPKIDIKITDAIRRKWQCGTVQVDMNLPARFELSYTNET 465

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANL 574
                PVMIHRA+ GS ERFI I+ E++ GN P +++P+Q  +  ++   +EYAQEI + 
Sbjct: 466 GNLEQPVMIHRAILGSFERFIAILTEHYSGNYPFFIAPVQIALVPVSMDQLEYAQEIYHK 525

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           L      +    +NET++ +IR    +KIP I++ G +E ++ S+ IR
Sbjct: 526 LNKRGFFVCMADKNETLSKRIRSLEKQKIPFIVVVGKEEVAQGSLAIR 573


>gi|223984594|ref|ZP_03634721.1| hypothetical protein HOLDEFILI_02017 [Holdemania filiformis DSM
           12042]
 gi|223963441|gb|EEF67826.1| hypothetical protein HOLDEFILI_02017 [Holdemania filiformis DSM
           12042]
          Length = 590

 Score =  489 bits (1258), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 248/586 (42%), Positives = 381/586 (65%), Gaps = 24/586 (4%)

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDEL 119
           +I  ++   L V+ HSCAH++A+AV+ ++P  +  +GP+I DGFYYD D  +     ++L
Sbjct: 11  MINIKEDEHLHVLNHSCAHLLAQAVKHLYPHAKFWVGPVITDGFYYDIDLGDDVLHEEDL 70

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENV-TLYRQGE 178
           A+IEK+M++I       ++  +S  +A E+F  K + YK++++  +   + V + Y QG+
Sbjct: 71  AKIEKEMKKIAKDGKRIVRHEISKAEALEMF--KDDPYKLDLIGHMDEDDTVISCYSQGD 128

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + DLCRGPHV S  ++K F KL+KV+GAYW+GD+N  ML R+YG  ++T +E+  YL FL
Sbjct: 129 FTDLCRGPHVESVKELKHF-KLLKVSGAYWKGDANNKMLQRVYGICFDTDEEVQNYLNFL 187

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTP 297
           EE++KRDH+KL RE+DLF ++E G G  F+   G  +   L +Y      K+ Y+ I TP
Sbjct: 188 EEAKKRDHKKLGRELDLFMMSEYGPGFPFFLPNGMILRNVLENYWYEEHTKEGYQFIKTP 247

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +L + LW+ SGHW +Y+ NM+       T+ D R FA+KPMNCPG + V+ +GL SY++
Sbjct: 248 IMLSKDLWELSGHWANYQDNMYT------TMIDDREFAIKPMNCPGGILVYKNGLHSYKD 301

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+ E G V+R+E SG+L+GL RVR FTQDDAH+F  ++Q+ +E +++ N I  +Y  
Sbjct: 302 LPLRIGELGQVHRHEASGALNGLFRVRTFTQDDAHIFMREDQIESEVVRLINFIDRVYSV 361

Query: 418 FGFEKIMVKLSTRPEKR-VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           FG     ++LSTRPEK+ +GS  +WD AE  ++        +   +IN G    +GAFYG
Sbjct: 362 FGL-SYEIELSTRPEKKYIGSIEIWDKAEAALEAACHAAGKAC--KINPG----DGAFYG 414

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK ++ L D++GR WQCGTIQ+D NLP RF+  YV++   K  P+M+HR +FGSIERFIG
Sbjct: 415 PKLDFHLTDSLGRVWQCGTIQLDMNLPERFDLTYVDADGSKKRPIMLHRVIFGSIERFIG 474

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKI 595
           I+IE++ G  P+WL+P Q ++  +     ++YA+E+  +L +  + ++ D RNE + Y++
Sbjct: 475 ILIEHYAGAFPMWLAPQQVVIVPVHHERHLDYAKELEAMLLAKGVRVKVDGRNEKLGYRV 534

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFG---STTTQKVSLLDAI 638
           RE    KIP+ I+ GD E    +  +RR+G   S T  K  LL++I
Sbjct: 535 REAQTHKIPMQIVVGDGEVENNTATVRRYGKKDSVTLSKEELLESI 580


>gi|88803834|ref|ZP_01119357.1| threonyl-tRNA synthetase [Polaribacter irgensii 23-P]
 gi|88780362|gb|EAR11544.1| threonyl-tRNA synthetase [Polaribacter irgensii 23-P]
          Length = 646

 Score =  489 bits (1258), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 257/649 (39%), Positives = 391/649 (60%), Gaps = 21/649 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           IK+T PDG+IK F  ++T  D+A+SIS   A+  ++   N    + S P+  +GS+ + T
Sbjct: 2   IKITLPDGTIKEFAKNSTPMDIAKSISEGFARNVISANFNKTTVETSTPLTTDGSLILYT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSD-ELAQI 122
            ED        HS AH++AEA+ + +P+ ++ IGP I++GFYYD D E+   SD +  Q+
Sbjct: 62  FEDTNGKKAFWHSSAHVLAEAILNFYPKAKLTIGPAIDNGFYYDVDLEEDIISDKDFKQL 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E K  EI      F  + +S   A   + ++   YKVE++E++    ++T     ++ DL
Sbjct: 122 ETKFLEIARGKHEFSIRSVSKADALSKYAAEDNPYKVELIENL-TDGDITFCDHSDFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRG HV +TG +K   K+  VAGAYWRGD     L+R+YG ++  Q+ LT+YL  LEE++
Sbjct: 181 CRGGHVPNTGIIKAI-KITSVAGAYWRGDEKNKQLTRVYGISFPKQKLLTEYLALLEEAK 239

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           +RDHRKL RE++LF  ++  G+G+  W  KG  +   L  ++++ + K  YE + TP + 
Sbjct: 240 QRDHRKLGRELELFTFSQKVGAGLPLWLPKGAALRGRLEDFLKKAQKKAGYEMVMTPHIG 299

Query: 301 DQHLWQQSGHWDSYRANMF-AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            + L+  SGH++ Y A+ F ++K    T K    F LKPMNCP H  V+N    SY++LP
Sbjct: 300 QKELYVTSGHYEKYGADSFQSIK----TPKMDEEFLLKPMNCPHHCEVYNFKPYSYKDLP 355

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
            R AEFG+VYR E SG LHGL RVRGFTQDDAH+FCT EQ+  E   + +L++ ++   G
Sbjct: 356 KRFAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCTPEQLDQEFKDVIDLVLYVFSSLG 415

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           FE    ++S R    PEK +G    W+ AEN +      I  ++   ++  V  GE AFY
Sbjct: 416 FEDFTAQVSIRDKNTPEKYIGDVETWEIAENAI------ISAATDKGLSFVVEEGEAAFY 469

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDA+GR WQ GTIQVD+NLP RF+  Y  + ++   PVMIHRA FGS+ERFI
Sbjct: 470 GPKLDFMVKDALGRSWQLGTIQVDYNLPKRFDLTYKGADNQLHRPVMIHRAPFGSMERFI 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            +++E+  GN PLWL+P Q I+  I+    +Y++++   L++  +    D RNE    KI
Sbjct: 530 AVLLEHTGGNFPLWLTPDQVILLPISDKYQKYSEKVLESLENSEIRALADNRNEKTGRKI 589

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R+  + K P ++I G+KE  E ++ +R+ G       ++ + I ++  E
Sbjct: 590 RDAEVSKTPYMVIVGEKEEQEGTVSVRKHGEGDIGTFTIEEFISLIKTE 638


>gi|298373605|ref|ZP_06983594.1| threonine--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058]
 gi|298274657|gb|EFI16209.1| threonine--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058]
          Length = 650

 Score =  488 bits (1257), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 263/645 (40%), Positives = 393/645 (60%), Gaps = 24/645 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
           M   +K+TFPD S++ +    T   +AESIS  LA + +  ++NG + DL+ P+ E S I
Sbjct: 1   MKYSMKITFPDNSVREYEKGTTAYQIAESISPRLAAEVLVASVNGNIYDLNRPIDEDSTI 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQP----FS 115
           ++   ++P +     H+ +H+MAEA+Q ++P V+  IGP IE+GFYYD   E P      
Sbjct: 61  KLHKWDEPEAKHAFWHTSSHLMAEALQELYPGVKFGIGPAIENGFYYDV--ELPAGVVIK 118

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
             +L ++EKKM E+ AR     +  +S   A E F S+ E  K E++  + A   +T Y 
Sbjct: 119 EGDLEKVEKKMYELAARKETLRRSSISKADALEYFGSRGEHLKTELISEL-ADGTITTYT 177

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
           QG + DLCRGPH+ ST ++K   KL+ VAGAYWRG+  RP L+RIYG  +  +++L +YL
Sbjct: 178 QGGFTDLCRGPHLTSTAEIKAI-KLLSVAGAYWRGNEKRPQLTRIYGITFPKKKQLEEYL 236

Query: 236 YFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEE 293
             LEE++KRDHRK+ +E++LF  ++  G G+  W  KG  +   L +++++  K   Y++
Sbjct: 237 TLLEEAKKRDHRKIGKELELFTFSDMVGKGLPLWLPKGTDLRLRLENFLKKLQKRYGYQQ 296

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           + TP +  + L+  SGHW  Y  + F       T ++   + LKPMNCP H  ++    K
Sbjct: 297 VITPHIGAKQLYVTSGHWAKYGKDSFQ---PIQTPEEGEEYLLKPMNCPHHCEIYKSTPK 353

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SY++LP R+AEFG+VYR E SG LHGL RVR FTQDDAH+FC  +Q+  E +K+  +I+ 
Sbjct: 354 SYKDLPFRVAEFGTVYRYEQSGELHGLTRVRSFTQDDAHLFCRPDQIKEEFIKVMEIILI 413

Query: 414 IYKDFGFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL 469
           I+K   F+    ++S R     EK +GSD  W+ AEN +      I+   +  +   V  
Sbjct: 414 IFKALRFDNFEAQISLRDKVDREKYIGSDENWEKAENAI------IEACRETGLKAVVEY 467

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG 529
           GE AFYGPK ++++KDA+GR WQ GTIQVD+NLP RF   Y  + ++K  PVMIHRA FG
Sbjct: 468 GEAAFYGPKLDFMVKDALGRRWQLGTIQVDYNLPERFELEYTGADNQKHRPVMIHRAPFG 527

Query: 530 SIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE 589
           S+ERF+ ++IE+  G  PLWL+P QA+V  I+    EYAQ++A+ L    +    DFR+E
Sbjct: 528 SMERFVAVLIEHTAGKFPLWLTPEQAVVLPISEKFNEYAQQVASRLNILDVRAIGDFRDE 587

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
            I  KIR++ +K IP ++I G+ E    ++ +RR G     K+ +
Sbjct: 588 KIGRKIRDNELKHIPYLLIVGNDEMETNTVAVRRQGEGDKGKMKV 632


>gi|330995385|ref|ZP_08319295.1| threonine--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
 gi|329575880|gb|EGG57404.1| threonine--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
          Length = 647

 Score =  488 bits (1257), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 248/630 (39%), Positives = 385/630 (61%), Gaps = 20/630 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+TFPDGS++ +    TG  +AESIS  LA+  +A  +NG+  +L+ P+ E  S+ +  
Sbjct: 2   IKITFPDGSVREYEAGVTGLQIAESISSRLAQDVLACGVNGETVELNRPINEDASVMLYK 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF--DKEQPFSSDELAQ 121
            ED        H+ AH+MAEA+Q ++P +Q  IGP IE+GFYYD            + A 
Sbjct: 62  WEDAEGKHAFWHTSAHLMAEAMQELYPGMQFGIGPAIENGFYYDVMPPAGTVIRESDFAG 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEKKM E+  R  P ++  +S   A + F  + + YK E++E +    +++ Y QG + D
Sbjct: 122 IEKKMLELAQRKEPVVRAEISKAGALKFFGERGQTYKNELIEDL-EDGHISTYTQGAFTD 180

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ +TG +K   K+  V+ AYWRGD  RP ++R+Y  ++  ++ L +YL  LEE+
Sbjct: 181 LCRGPHLMNTGVIKAV-KVTAVSSAYWRGDEKRPQMTRVYAISFPKKKMLDEYLTLLEEA 239

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           +KRDHRK+ +EM+LF  +E  G G+  W  KG  +   L  ++++ + +  Y+++ TP +
Sbjct: 240 KKRDHRKIGKEMELFMFSERVGKGLPMWLPKGTALRLRLEDFLKKIQKRYGYQQVMTPHI 299

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             ++L+  SGH+  Y  + F      +  ++   + LKPMNCP H  ++    +SY++LP
Sbjct: 300 GGKNLYVTSGHYAHYGKDSFQPIHTPEADEE---YMLKPMNCPHHCEIYAWKPRSYKDLP 356

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AEFG+VYR E SG LHGL RVR FTQDDAH+FC  +Q+ +E +++  +I  I+    
Sbjct: 357 LRIAEFGTVYRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKDEFIRVMEIIQIIFGALN 416

Query: 420 FEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           F+    ++S R     EK +GSD +W++AEN +      I+   +  +N  V  GE AFY
Sbjct: 417 FDTFEAQISLRDPNNREKYIGSDEVWEEAENAI------IEACKEKGLNAKVEYGEAAFY 470

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDA+GR WQ GTIQVD+NLP RF   Y    ++K  PVMIHRA FGS+ERF 
Sbjct: 471 GPKLDFMVKDALGRRWQLGTIQVDYNLPERFKLEYTGEDNQKHRPVMIHRAPFGSMERFC 530

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE+  G+ PLWL+P Q  +  I+    +YA ++        +    D RNE I  KI
Sbjct: 531 AVLIEHTAGHFPLWLTPDQVAILPISEKFNDYAHKLCAYFDERDVRAIVDDRNEKIGRKI 590

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFG 625
           R++ +K+IP ++I G+KEA++ ++ +R+ G
Sbjct: 591 RDNEMKRIPYMLIVGEKEAADGTVSVRKQG 620


>gi|268608298|ref|ZP_06142025.1| threonyl-tRNA synthetase [Ruminococcus flavefaciens FD-1]
          Length = 646

 Score =  488 bits (1257), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 251/633 (39%), Positives = 370/633 (58%), Gaps = 13/633 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           IKLT PD S++        +++ + I   L K A  V +NG+V DL   +  +   E+ T
Sbjct: 2   IKLTLPDNSVREIESAQPAAEIVKGIGMGLYKSACCVKVNGEVKDLRTVIDSDCKFEVCT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +         H+ +HI+A+AV+ ++P  ++AIGP I++GFYYDFD E+PF+  EL +IE
Sbjct: 62  FDSLDGKKTFWHTASHILAQAVKRLYPNTKLAIGPAIDNGFYYDFDLEKPFTPAELEKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-ENVTLYRQGEWFDL 182
            +M++I+  D    +  LS   A    +   E YKVE+ E    K E ++ Y+QGE+ DL
Sbjct: 122 AEMKKIVKEDLALEQFELSPADAIAKLKEMDEPYKVELCEEHADKGEPISFYKQGEFTDL 181

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPH+ +T  VK F KL+   GAYWRG+ N  +LSR+Y  A+    +L +YL  +EE++
Sbjct: 182 CAGPHLMTTAPVKAF-KLLSCTGAYWRGNENNKVLSRVYAIAFPKASQLDEYLKMIEEAK 240

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
            RDH+KL +E  LF       G+ +W  +GWK+F  L+ Y R   +D  Y EI+ P +  
Sbjct: 241 LRDHKKLGKEQALFMFDHTAPGMPYWLPRGWKLFNALLEYWRGVHEDHGYTEISGPVLSK 300

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW  SGHWD Y+  MF +   +D       +  KPMNCP  + V+ +  +SY+ELP++
Sbjct: 301 KELWVTSGHWDHYQDGMFVIPAEEDN----EVYCAKPMNCPNAIKVYMNRQRSYKELPLK 356

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
             +   ++R E SG L+GL RV+ F QDDAH+  T+EQ+ +E   I ++   IY  FG E
Sbjct: 357 FNQVDVIHRKEKSGELNGLFRVQQFRQDDAHILVTEEQIASEINDIMDIATEIYNTFGLE 416

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
               +LSTRP+  +G   +W+ AE  +K +L+         +N G    +GAFYGPK + 
Sbjct: 417 -YKAELSTRPDDYMGDINVWNKAEADLKAILEDKYGPDGYELNEG----DGAFYGPKIDL 471

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDAIGR+WQ GTIQ+DF LP  F   Y+ S   +  PVMIHRA+FGS ERFIGI+ EN
Sbjct: 472 KMKDAIGREWQMGTIQLDFQLPLNFKMKYIASDGSEKQPVMIHRAIFGSFERFIGIITEN 531

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           F G  P WLSP+Q  +  I +   +YA+++A LLK +H+  E D+ ++ +  KIR+    
Sbjct: 532 FAGAFPFWLSPMQVGIVPIRTEHNDYAKKVAALLKKNHIRAEADYTDDNMKNKIRKFKDF 591

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           K P ++I GD EA    + I   G+   + V L
Sbjct: 592 KDPYVVIIGDSEAENEQVSINIRGNKQLKNVPL 624


>gi|206896471|ref|YP_002247167.1| threonyl-tRNA synthetase [Coprothermobacter proteolyticus DSM 5265]
 gi|206739088|gb|ACI18166.1| threonyl-tRNA synthetase [Coprothermobacter proteolyticus DSM 5265]
          Length = 632

 Score =  488 bits (1257), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 257/606 (42%), Positives = 381/606 (62%), Gaps = 23/606 (3%)

Query: 47  VCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYY 106
             D S  V E  +E I+ E+  +L+V+RHS +H+MA+AV++++P  ++ IGP IE+GFYY
Sbjct: 38  TADESATVGEDGVEFISKEE--ALSVLRHSASHLMAQAVKNLFPGTKLGIGPAIENGFYY 95

Query: 107 DFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIP 166
           D    +  +  +L +IE++M  +     P  +Q ++ E A++LF+S  E +KVE++E I 
Sbjct: 96  DMLIPEGLTEADLTRIEEEMVRLSKESLPVERQVMTKEDAKKLFQSLNEPFKVELIEEIE 155

Query: 167 AKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWN 226
             + VT+YRQGE+ DLCRGPHV +TG +K F KL+ ++GAYWRGD NR  L+RIYGT + 
Sbjct: 156 G-DYVTVYRQGEFVDLCRGPHVNNTGLIKHF-KLLSISGAYWRGDENREQLTRIYGTCFW 213

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR 285
           T  EL ++L+ LEE+E+RDHRKL +++DLF I ED G G+I WH  G  I + +  + R+
Sbjct: 214 TSDELEEFLHNLEEAERRDHRKLGKQLDLFSINEDIGPGLILWHPNGAVIRKEIEDFWRQ 273

Query: 286 K-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
             I + Y+ + TP V    LW+ SGH   Y+ NMF     ++     +++ +KPMNCP H
Sbjct: 274 SHIDNGYQLVYTPHVARTKLWEISGHLSFYKENMFPSMELEN-----QSYLVKPMNCPFH 328

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           V ++    +SY+ELP+R AE G+VYR E SG LHGL+RVRGFTQDDAH+FC +EQ+  E 
Sbjct: 329 VQIYKTKTRSYKELPIRFAELGTVYRFERSGVLHGLLRVRGFTQDDAHIFCAREQVEEEV 388

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQ 460
            K+ ++ + IY+ FGFE + ++LS R     +K VG D +W+ AE+ + G L      ++
Sbjct: 389 EKVLDMALGIYRLFGFEDLRIELSVRDPKNKDKYVGDDDVWELAESALSGAL-----KAR 443

Query: 461 DRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHP 520
           D ++  V  GE  FYGP  +  +KDA+GR WQ  TIQVDFNLP RFN  Y      +  P
Sbjct: 444 D-LDFTVAEGEAKFYGPAIDIKVKDALGRYWQGPTIQVDFNLPRRFNMKYTGQDGLEHEP 502

Query: 521 VMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHL 580
           VMIHRA+ GS+ERF  ++IE + G  PLW++P Q  +  IT   ++YAQ +A  LK   +
Sbjct: 503 VMIHRALLGSLERFFALLIEQYSGWFPLWVAPEQVRILPITEDQMQYAQSVAEGLKEFRV 562

Query: 581 SIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
            ++TD     + Y+IR    +K+P +++ G KE     + +R        ++S LD    
Sbjct: 563 KLDTD-TGSKLGYRIRRGQTEKVPYMLVVGSKEVESGVVSVRHGVKGDLGQMS-LDEFKS 620

Query: 641 LTKESL 646
           + KE +
Sbjct: 621 MIKEEI 626


>gi|33866012|ref|NP_897571.1| threonyl-tRNA synthetase [Synechococcus sp. WH 8102]
 gi|73919836|sp|Q7U662|SYT_SYNPX RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|33638987|emb|CAE07993.1| threonyl-tRNA synthetase [Synechococcus sp. WH 8102]
          Length = 611

 Score =  488 bits (1257), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 252/569 (44%), Positives = 353/569 (62%), Gaps = 21/569 (3%)

Query: 61  IITPEDPRS--LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           ++ P+   S  L  IRHS +H+MA AVQ ++P+ +V IGP  E GFYYDFD   PF+  +
Sbjct: 23  VVLPKTSESSQLLKIRHSMSHVMAMAVQQLFPKARVTIGPWTESGFYYDFDNPDPFTEAD 82

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L  I+K M +II +  P  +  ++  +A    +++ E YK+EILE +  ++ +TLY  GE
Sbjct: 83  LKAIKKGMIKIINKKVPLERVEVTRAEAETKIKAQNEPYKLEILEGL--QDPITLYTLGE 140

Query: 179 -WFDLCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
            W+DLC GPHV  TGQ+  K F+L  VAGAYWRGD  +  L RIYGTAW T ++L ++  
Sbjct: 141 DWWDLCAGPHVEHTGQLNAKAFELESVAGAYWRGDETKAQLHRIYGTAWETPEQLAEHKR 200

Query: 237 FLEESEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEI 294
             EE+ +RDHR++ +++DLF I  E G+G++FWH +G ++   +  + R+   +  YE +
Sbjct: 201 RKEEALRRDHRRIGKDLDLFSIEDEAGAGLVFWHPRGARMRLLIEEFWRQAHFEGGYELL 260

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
            TP V D  LW+ SGH D Y  +MF     D+     R + LKPMNCP HV  +   L+S
Sbjct: 261 YTPHVADISLWKTSGHLDFYAESMFGPMEVDE-----REYQLKPMNCPFHVLTYASKLRS 315

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YRELP+R AE G+VYR E  G +HGLMRVRGFTQDDAHVFC  EQ+ +E LKI +L   I
Sbjct: 316 YRELPIRWAELGTVYRYERPGVMHGLMRVRGFTQDDAHVFCLPEQISDEILKILDLTERI 375

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSS-QDRINTGVLLGEGA 473
              F F    + LSTRPEK +G DA+WD A    KG+++ ++    + +I+ G     GA
Sbjct: 376 LSTFDFNTYEINLSTRPEKSIGDDAVWDLA---TKGLIEALERKGWKYKIDEG----GGA 428

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  ++DAIGR WQC TIQ+DFNLP RF   YV +   K  P+MIHRA+FGS+ER
Sbjct: 429 FYGPKIDLKIEDAIGRMWQCSTIQLDFNLPERFKLDYVAADGSKQRPIMIHRAIFGSLER 488

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           F GIM EN+ G+ P WL+P Q  +  +T     YA+ + + L    +    D   + +  
Sbjct: 489 FFGIMTENYAGDYPFWLAPEQVRLLPVTDEVQPYAESLLDQLTQAGVRATIDRSGDRLGK 548

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIR 622
            IR     KIP++ + G KEA + ++ +R
Sbjct: 549 LIRTGEQMKIPVLAVIGAKEAEQNAVSLR 577


>gi|15595065|ref|NP_212854.1| threonyl-tRNA synthetase [Borrelia burgdorferi B31]
 gi|218249246|ref|YP_002375218.1| threonyl-tRNA synthetase [Borrelia burgdorferi ZS7]
 gi|223889476|ref|ZP_03624062.1| threonyl-tRNA synthetase [Borrelia burgdorferi 64b]
 gi|8928363|sp|O51662|SYT_BORBU RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|226701542|sp|B7J0G5|SYT_BORBZ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|2688663|gb|AAC67076.1| threonyl-tRNA synthetase (thrZ) [Borrelia burgdorferi B31]
 gi|218164434|gb|ACK74495.1| threonyl-tRNA synthetase [Borrelia burgdorferi ZS7]
 gi|223885162|gb|EEF56266.1| threonyl-tRNA synthetase [Borrelia burgdorferi 64b]
 gi|312147875|gb|ADQ30534.1| threonyl-tRNA synthetase [Borrelia burgdorferi JD1]
          Length = 581

 Score =  488 bits (1257), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 245/571 (42%), Positives = 358/571 (62%), Gaps = 16/571 (2%)

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           RHS AH+MAEAV  ++P  ++AIGP I+DGFYYDF+ ++  + D L  IE +M+EI+   
Sbjct: 15  RHSIAHVMAEAVLDLFPNTKIAIGPPIKDGFYYDFEFKKQITEDSLLDIENRMREILKTG 74

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQ 193
           S F K+ +S E+A E+F  K E YK++++++   +  V++Y+   + DLCRGPHV +  +
Sbjct: 75  SSFEKEIISVEQALEIF--KDEPYKIDLIKNFDLQNEVSIYKSHNFVDLCRGPHVENMNK 132

Query: 194 VK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLARE 252
           +  K FKL  +AGAYWRG    PML+RIYGT WN ++EL  YL   EE +KRDHRKL +E
Sbjct: 133 IDPKAFKLTSIAGAYWRGSEKNPMLTRIYGTLWNNEKELRSYLNLREEIKKRDHRKLGKE 192

Query: 253 MDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGH 310
           +DLF I E+ G G++F+H  G KI   +  + R +  K+ Y+ + TP +    LWQ SGH
Sbjct: 193 LDLFSIHEEIGPGLVFFHPNGAKIRALIEDFWREEHSKNGYDILFTPHIGKSWLWQTSGH 252

Query: 311 WDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYR 370
            D Y+ +MF     D +      + LKPMNCP H+A++N G  SYR+LP R AE G+VYR
Sbjct: 253 LDFYKDSMFEKIEMDKS-----DYYLKPMNCPFHIAIYNTGKHSYRDLPFRWAELGTVYR 307

Query: 371 NEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR 430
            E  G+LHG+MR RGFTQDDAH+ CT  Q+ +E  ++    I ++  FGF      LST+
Sbjct: 308 YEKIGALHGMMRARGFTQDDAHIICTHSQVLDEIKEVLRFAIYMWSKFGFSNPKAYLSTK 367

Query: 431 PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRD 490
           P+K VG+D+ W+ +  +++  L      S   +   +  G GAFYGPK +  + D++ R+
Sbjct: 368 PDKSVGNDSDWEMSLKVLEETL------SDFEVPYEIDKGGGAFYGPKIDLKIVDSLERE 421

Query: 491 WQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL 550
           WQ  TIQ DFNLP RFN  Y     ++  P MIHRA+ GSIERF GI++E++ G  PLWL
Sbjct: 422 WQMSTIQFDFNLPERFNMTYTAEDGKEKRPFMIHRALLGSIERFFGILVEHYGGAFPLWL 481

Query: 551 SPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           SP+Q ++  + +   +YA ++ N  K+  + I+ D  +  +N KIRE+  KKIP + I G
Sbjct: 482 SPVQVVIIPVNNIVEDYAIKVFNKFKNEGIRIKLDNSSSRMNAKIREYQAKKIPYMFIIG 541

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           ++EA+E  I IR   +     + L +A+  +
Sbjct: 542 EREATEERISIRTRTNEQINGMKLDEALKFI 572


>gi|113475159|ref|YP_721220.1| threonyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
 gi|110166207|gb|ABG50747.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Trichodesmium
           erythraeum IMS101]
          Length = 608

 Score =  488 bits (1256), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 247/586 (42%), Positives = 368/586 (62%), Gaps = 16/586 (2%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           + ++L  IRH+ +H+MA AVQ ++P+ QV IGP IE+GFYYDFD  + F+  +L  I+K+
Sbjct: 23  ESQTLKKIRHTTSHVMAMAVQKLFPKAQVTIGPWIENGFYYDFDTLESFTEADLKAIKKE 82

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE-WFDLCR 184
           M +II R+ P +++ +S E+A+   E  KE YK+EILE +  ++ +T+Y  GE W+DLC 
Sbjct: 83  MVKIIKRNLPVIREEVSREEAKRRIEEIKEPYKLEILEDL--EDPITIYHLGEDWWDLCA 140

Query: 185 GPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           GPH+ ST Q+  K  +L  VAGAYWRGD  +  L RIYGTAW T ++LT+Y    EE+ K
Sbjct: 141 GPHIESTKQINPKAIELETVAGAYWRGDETKAQLQRIYGTAWETPEQLTEYKRRKEEALK 200

Query: 244 RDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           R+HRKL +E+ LF  ++  G G+  W  KG  +  +L  ++++ ++K  Y  ++TP +  
Sbjct: 201 RNHRKLGKELGLFIFSDLVGPGLPLWTPKGTMLKNSLKDFLQQEQLKRGYLPVDTPHIAR 260

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDL-RTFALKPMNCPGHVAVFNHGLKSYRELPV 360
             L++ SGHW  Y+ +MF +   D+  + L + F LKPMNCP H+ ++ + L+SYRELP+
Sbjct: 261 IDLFKTSGHWQKYKEDMFPMMAEDEQAEALEQGFVLKPMNCPFHIQIYKNELRSYRELPI 320

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLAEFG+VYR+E SG L GL RVRGFTQDD+H+F T EQ+  E L + +L + ++K    
Sbjct: 321 RLAEFGTVYRHEKSGELGGLTRVRGFTQDDSHLFVTPEQLDAEFLSVVDLTLFVFKSLQL 380

Query: 421 EKIMVKLSTRP---EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           +    +LS R    +K +GSD  W+ AE  ++  ++ +     + I      GE AFYGP
Sbjct: 381 QNFKARLSFRDPNLDKYIGSDEAWEKAEGAIRRAVEKMGMDHFEGI------GEAAFYGP 434

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K ++I +DA+ R+WQ GT+QVD+NLP RF+  YV     +  PVMIHRA FGS+ER IGI
Sbjct: 435 KLDFIFQDALEREWQLGTVQVDYNLPERFDLEYVAEDGTRKRPVMIHRAPFGSLERLIGI 494

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE + G+ P+WL+P Q  +  + S    +AQE+A  +    +  E D  NE +   IR 
Sbjct: 495 LIEEYAGDFPVWLAPTQVKLLPVNSEFWPFAQEVAEQMLQVGIRAEVDMSNERLGKLIRN 554

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
               KIPI+ + G KE    S+ IR   +     + +++ I  +TK
Sbjct: 555 AEKAKIPIMAVVGAKEVESNSLSIRTRSTGELGSIPVMEVIQKMTK 600


>gi|282858709|ref|ZP_06267863.1| threonine--tRNA ligase [Prevotella bivia JCVIHMP010]
 gi|282588513|gb|EFB93664.1| threonine--tRNA ligase [Prevotella bivia JCVIHMP010]
          Length = 649

 Score =  488 bits (1256), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 253/639 (39%), Positives = 393/639 (61%), Gaps = 19/639 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           +K+TFPDGS++ +    TG  +AESIS +LA+  V+  +NG   +L+ P+ E  +I +  
Sbjct: 2   VKITFPDGSVREYEQGVTGYQIAESISPALARNVVSCGVNGVTTELNRPINEDATIALYR 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ--PFSSDELAQ 121
            ED        HS AH++AEA++ ++P +Q   GP IE+GF+YD       P S ++  +
Sbjct: 62  FEDEEGKHSFWHSSAHLLAEALKELYPGIQFGFGPAIENGFFYDVQTADGTPISENDFPK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE KM E+  +DSP +++ +   +A + F +  + YKVE ++       ++ Y QG + D
Sbjct: 122 IEAKMLELAKKDSPIIRREVPKAEAIKEFTADGQTYKVEHIDQDLEDGTISTYSQGNFTD 181

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ STG +K   KL  VAGA+WRGD+    L+RIYG  +  ++ L +YL  LEE+
Sbjct: 182 LCRGPHLVSTGIIKAV-KLTSVAGAFWRGDAKNDQLTRIYGITFPKKKMLDEYLVMLEEA 240

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQV 299
           +KRDHRK+ +EM+LF  ++  G G+  W  KG ++   L   +R+ +K  +Y+E+ TP +
Sbjct: 241 KKRDHRKIGKEMELFMFSDRVGKGLPIWLPKGTQLRLRLQDLLRKLLKPYNYQEVITPGI 300

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             ++L+  SGH+  Y  + F       T ++   + LKPMNCP H  ++ H  +SY++LP
Sbjct: 301 GSKNLYVTSGHYAHYGKDAFQ---PIQTPEEDEEYMLKPMNCPHHCEIYAHKPRSYKDLP 357

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AEFG+VYR E SG LHGL RVR FTQDDAH+F   +Q+  E     ++I+ ++K FG
Sbjct: 358 LRIAEFGTVYRYEKSGELHGLTRVRNFTQDDAHIFVRPDQVKAEFENNIDIILKVFKTFG 417

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           FE    ++S R     EK +G D +W+++E  +K      +  ++  +   V LGE AFY
Sbjct: 418 FENYEAQISLRDPEDKEKYIGEDDVWNESEQAIK------EACAEKGLKATVELGEAAFY 471

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDAIGR WQ GTIQVD+NLP RF+  Y    + K  PVM+HRA FGS+ERF 
Sbjct: 472 GPKLDFMVKDAIGRRWQLGTIQVDYNLPQRFHLEYTAEDNTKKTPVMVHRAPFGSMERFT 531

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE+  G+ PLWL+P Q  +  I+    +YA+E+   L +  +    D RNE I  KI
Sbjct: 532 AVLIEHTAGHFPLWLTPDQVAILPISEKYNDYAREVMQKLDTAGVRALIDDRNEKIGRKI 591

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           R++ +K+IP +++ G+KEA+E  + +R+ G      +++
Sbjct: 592 RDNELKRIPYMVVVGEKEAAEGLVAMRKQGGGEQSTMTI 630


>gi|320011858|gb|ADW06708.1| threonyl-tRNA synthetase [Streptomyces flavogriseus ATCC 33331]
          Length = 658

 Score =  488 bits (1256), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 267/670 (39%), Positives = 394/670 (58%), Gaps = 50/670 (7%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIEII 62
           SD+++     S +   V  TG+  AE       +  VA  + G++ DL+  +++G  E++
Sbjct: 2   SDVRVIIQRDSEREEHVVTTGTTAAELFPGQ--RTVVAARVGGELRDLAYELKDG--EVV 57

Query: 63  TPEDPRS---LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            P +  S   L ++RHS AH+MA+AVQ + PE ++ IGP ++DGFYYDFD E+PF+ ++L
Sbjct: 58  EPVEISSEDGLNILRHSTAHVMAQAVQELHPEAKLGIGPPVKDGFYYDFDVEKPFTPEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN--------- 170
             IEKKMQEI  R   F ++ ++ E ARE  E   E YK+E++    +  +         
Sbjct: 118 KAIEKKMQEIQKRGQRFSRRVVTDEAARE--ELADEPYKLELIGIKGSASSDDGADVEVG 175

Query: 171 ---VTLY-----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRI 220
              +T+Y     + G+  W DLCRGPH+ +T  +  F KLM+ A AYWRG    PML RI
Sbjct: 176 GGELTIYDNLDAKTGDLCWKDLCRGPHLPTTRFIPAF-KLMRNAAAYWRGSEKNPMLQRI 234

Query: 221 YGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTL 279
           YGTAW T+ EL  +L FLEE+ KRDHRKL  E+DLF   ++ G G+  +H KG  I + +
Sbjct: 235 YGTAWPTKDELKAHLEFLEEAAKRDHRKLGNELDLFSFPDEIGPGLAVFHPKGGVIRRAM 294

Query: 280 ISYMRRKIKDD-YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKP 338
             Y RR+ +++ YE + +P      L+++SGH D Y   M+     DD +     + LKP
Sbjct: 295 EDYSRRRHEEEGYEFVYSPHATKGKLFEKSGHLDWYADGMYPPMQLDDGVD----YYLKP 350

Query: 339 MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE 398
           MNCP H  +F+   +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDDAH++CTKE
Sbjct: 351 MNCPMHNLIFDARGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRSRGFTQDDAHIYCTKE 410

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLSTR-PEKRVGSDALWDDAENIMKGVLDTIKN 457
           QM  E  +    ++++ +D+G     ++LST+ PEK VGSD +W++A   ++ V +    
Sbjct: 411 QMAEELDRTLTFVLNLLRDYGLTDFYLELSTKDPEKFVGSDEIWEEATETLRQVAE---- 466

Query: 458 SSQDRINTGVLL----GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS 513
                   G+ L    G  AFYGPK     KDAIGR WQ  T+Q+DFNLP RF+  Y   
Sbjct: 467 ------KQGLPLVPDPGGAAFYGPKISVQCKDAIGRTWQMSTVQLDFNLPERFDLEYTGP 520

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIAN 573
              K  PVMIHRA+FGSIERF  +++E++ G  P+WL+P+QA+   I  + + Y QE A 
Sbjct: 521 DGTKQRPVMIHRALFGSIERFFAVLLEHYAGAFPVWLAPVQAVGIPIGDTHIPYLQEFAA 580

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
             +   L ++ D  ++ +  KIR    +K+P +II GD++ +  ++  R    +    + 
Sbjct: 581 KARKQGLRVDVDASSDRMQKKIRNQQKQKVPFMIIAGDEDMANGAVSFRYRDGSQENGIP 640

Query: 634 LLDAIPILTK 643
           + +AI  + K
Sbjct: 641 VDEAIAKIAK 650


>gi|322371434|ref|ZP_08045983.1| threonyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
 gi|320548966|gb|EFW90631.1| threonyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
          Length = 645

 Score =  488 bits (1255), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 255/624 (40%), Positives = 380/624 (60%), Gaps = 27/624 (4%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS---IEI 61
           + ++ PDGS + F    + SDVA  I   L +  +A  ++G +  ++   R GS   + I
Sbjct: 9   VIVSLPDGSKREFDGPVSVSDVAYDIGPGLGEDCLAGIVDGNL--VAPEYRIGSNSDLRI 66

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +TP    ++ V+RHS AH++A+AV  ++P+ ++AIGP  ++GFYYDFD       D+LA 
Sbjct: 67  VTPGSEDAVRVLRHSAAHVLAQAVSRLFPDAKLAIGPPTDEGFYYDFDG-LDIDEDDLAD 125

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE +M++I++ D   +++ +S E+ARE      + YK+E+L+ I A E VT YRQGE+ D
Sbjct: 126 IEAEMRDIVSADYDIVREEVSPEEARERL--ADQPYKLELLDDIAADEPVTFYRQGEFED 183

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LC GPHV STG+V     L+++AGAYWRGD +  ML+R+YGTA+  + EL  +L   EE+
Sbjct: 184 LCAGPHVASTGEVGAL-SLLEIAGAYWRGDEDEAMLTRMYGTAFERESELESFLERREEA 242

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
            KRDHRK+ REMDLF + +   G + +H  G  I + L  Y+R K  +  YEE+ TP++ 
Sbjct: 243 AKRDHRKIGREMDLFSVPDHSPGCVNFHPNGMAIRRELEEYVREKNAELGYEEVKTPELN 302

Query: 301 DQHLWQQSGHWDSYR--ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
              LW++SGH+D ++    MFA +      ++   + LKPMNC  H  +++   +SYR+L
Sbjct: 303 HTELWKKSGHYDHFKEEGEMFAWE------QNGHEYGLKPMNCANHAHIYDDQRRSYRDL 356

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R +EFG  YRNE SG L G++RVRGFTQDD H F   E +  E  +  ++I  +Y+ F
Sbjct: 357 PLRFSEFGMCYRNEQSGELSGMLRVRGFTQDDGHAFVRPEGIREEIARTLSVIDGMYEAF 416

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           G +  +V L T+P+  +G D LW+ A   ++  L+       + +   V  GEGAFYGPK
Sbjct: 417 GLDAHLV-LETKPDDAIGDDELWERAHEALRNALE------DEGLEYDVAEGEGAFYGPK 469

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
               ++DAIGR+W  GT+Q+DF  P R +  YV   +E+  PVMIHRA+ GS+ERF+G+ 
Sbjct: 470 IAINVEDAIGREWTIGTVQLDFVQPERLDISYVGEDNEEHRPVMIHRALLGSMERFMGVF 529

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+  G  P WL+P Q  +  IT     YA+EIA+ L S    +E D R+ T+  KIR  
Sbjct: 530 IEHVAGKFPFWLAPEQVRILPITDDESGYAEEIADELGS--FRVEVDDRDWTLGKKIRAG 587

Query: 599 SIKKIPIIIICGDKEASERSIGIR 622
              ++P +II G  EA   +I +R
Sbjct: 588 HDDRVPYMIIVGSDEAESGTISVR 611


>gi|150024985|ref|YP_001295811.1| threonine--tRNA ligase [Flavobacterium psychrophilum JIP02/86]
 gi|166223340|sp|A6GY22|SYT_FLAPJ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|149771526|emb|CAL42995.1| Threonine--tRNA ligase [Flavobacterium psychrophilum JIP02/86]
          Length = 648

 Score =  488 bits (1255), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 258/639 (40%), Positives = 387/639 (60%), Gaps = 23/639 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           IK+T PDGSIK F    T  DVA+SIS  LA+  ++ A N    ++S  +  +GS+ + T
Sbjct: 2   IKITLPDGSIKEFENGVTPMDVAKSISEGLARNVISAAFNNITVEISTELTTDGSLVLYT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQI 122
             D        HS +H+MA+ ++ ++P +++ +GP I++GFYYD D  +      +  +I
Sbjct: 62  WNDKDGKKAFWHSTSHVMAQVLEEMYPGLKLTLGPAIDNGFYYDVDFGDTKIVEADFKKI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E ++ EI      F  + ++   A EL+  K   YK E++ ++     +T      + DL
Sbjct: 122 ESRILEISKEKHEFKLRPVTKADALELY--KDNEYKFELISNL-EDGTITFCDHATFTDL 178

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRG H+ +TG +K   K+M +AGAYWRGD     L+R+YGT++  Q++LT YL  LEE++
Sbjct: 179 CRGGHIPNTGIIKAV-KIMSIAGAYWRGDEKNKQLTRVYGTSFPKQKDLTDYLELLEEAK 237

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           +RDHRKL +E++LF  ++  G G+  W  KG  +   L  ++++ + K  YE++ TP + 
Sbjct: 238 RRDHRKLGKELELFAFSQKVGQGLPLWLPKGAALRDRLEQFLKKAQKKGGYEQVVTPHIG 297

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            + L+  SGH+  Y A+ F       T  +   F LKPMNCP H  ++N    SY++LP 
Sbjct: 298 QKELYVTSGHYAKYGADSFQ---PISTPTEGEEFLLKPMNCPHHCEIYNVRPWSYKDLPK 354

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R AEFG+VYR E SG LHGL RVRGFTQDDAH+FCT +Q+  E  K+ +L++ ++   GF
Sbjct: 355 RYAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCTPDQLDEEFKKVIDLVLYVFGSLGF 414

Query: 421 EKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDR-INTGVLLGEGAFY 475
           E    ++S R     +K +GSD  W+ AEN        I N+++D+ +NT V  GE AFY
Sbjct: 415 ENFTAQISLRDKENRDKYIGSDENWEKAEN-------AIINAARDKNLNTVVEYGEAAFY 467

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDA+GR WQ GTIQVD+NLP RF   Y  S  +   PVMIHRA FGS+ERFI
Sbjct: 468 GPKLDFMVKDALGRSWQLGTIQVDYNLPERFELTYKGSDDQLHRPVMIHRAPFGSMERFI 527

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            I++E+  GN PLWL P QAI+  ++     YA+++ NLL++H +    D RNE+I  KI
Sbjct: 528 AILLEHTAGNFPLWLMPEQAIILCLSDKYEIYAKKVLNLLENHEIRALIDNRNESIGRKI 587

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           R+  ++K P ++I G++E    +I IRR G      +++
Sbjct: 588 RDAEMQKTPFMLIVGEEEEKNNTISIRRHGQEGKGNITV 626


>gi|225548931|ref|ZP_03769908.1| threonyl-tRNA synthetase [Borrelia burgdorferi 94a]
 gi|225370534|gb|EEG99970.1| threonyl-tRNA synthetase [Borrelia burgdorferi 94a]
          Length = 581

 Score =  487 bits (1254), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 245/571 (42%), Positives = 357/571 (62%), Gaps = 16/571 (2%)

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           RHS AH+MAEAV  ++P  ++AIGP I+DGFYYDF+ ++  + D L  IE +M+EI+   
Sbjct: 15  RHSIAHVMAEAVLDLFPNTKIAIGPPIKDGFYYDFEFKKQITEDSLLDIENRMREILKTG 74

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQ 193
           S F K+ +S E+A E+F  K E YK++++++   +  V++Y+   + DLCRGPHV +  +
Sbjct: 75  SSFEKEIISVEQALEIF--KDEPYKIDLIKNFDLQNEVSIYKSHNFVDLCRGPHVENMNK 132

Query: 194 VK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLARE 252
           +  K FKL  +AGAYWRG    PML+RIYGT WN ++EL  YL   EE +KRDHRKL +E
Sbjct: 133 IDPKAFKLTSIAGAYWRGSEKNPMLTRIYGTLWNNEKELRSYLNLREEIKKRDHRKLGKE 192

Query: 253 MDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGH 310
           +DLF I E+ G G++F+H  G KI   +  + R +  K+ Y+ + TP +    LWQ SGH
Sbjct: 193 LDLFSIHEEIGPGLVFFHPNGAKIRALIEDFWREEHSKNGYDILFTPHIGKSWLWQTSGH 252

Query: 311 WDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYR 370
            D Y+ +MF     D +      + LKPMNCP H+A++N G  SYR+LP R AE G+VYR
Sbjct: 253 LDFYKDSMFEKIEMDKS-----DYYLKPMNCPFHIAIYNTGKHSYRDLPFRWAELGTVYR 307

Query: 371 NEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR 430
            E  G+LHG+MR RGFTQDDAH+ CT  Q+ +E  ++    I ++  FGF      LST+
Sbjct: 308 YEKIGALHGMMRARGFTQDDAHIICTHSQVLDEIKEVLRFAIYMWSKFGFSNPKAYLSTK 367

Query: 431 PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRD 490
           P+K VG+D  W+ +  +++  L      S   +   +  G GAFYGPK +  + D++ R+
Sbjct: 368 PDKSVGNDYDWEMSLKVLEETL------SDFEVPYEIDKGGGAFYGPKIDLKIVDSLERE 421

Query: 491 WQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL 550
           WQ  TIQ DFNLP RFN  Y     ++  P MIHRA+ GSIERF GI++E++ G  PLWL
Sbjct: 422 WQMSTIQFDFNLPERFNMTYTAEDGKEKRPFMIHRALLGSIERFFGILVEHYGGAFPLWL 481

Query: 551 SPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           SP+Q ++  + +   +YA ++ N  K+  + I+ D  +  +N KIRE+  KKIP + I G
Sbjct: 482 SPVQVVIIPVNNIVEDYAIKVFNKFKNEGIRIKLDNSSSRMNAKIREYQAKKIPYMFIIG 541

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           ++EA+E  I IR   +     + L +A+  +
Sbjct: 542 EREATEERISIRTRTNEQINGMKLDEALKFI 572


>gi|313899489|ref|ZP_07832999.1| threonine--tRNA ligase [Clostridium sp. HGF2]
 gi|312955777|gb|EFR37435.1| threonine--tRNA ligase [Clostridium sp. HGF2]
          Length = 579

 Score =  487 bits (1254), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 247/590 (41%), Positives = 386/590 (65%), Gaps = 23/590 (3%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSD 117
           + +I  ++   L+ + HSCAH+MA+AV+ ++P+ +  +GP+I +GFYYD D  ++    +
Sbjct: 1   MNMIDIKEHEELSRLNHSCAHMMAQAVKRLYPQAKFWVGPVISEGFYYDIDLGDEVIKEE 60

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +LA+IEK+M++I       +++ +S E+A E+F++  + YK++++  +     +T Y+QG
Sbjct: 61  DLAKIEKEMKKIAKDGKRIVRKEISKEEALEMFQN--DPYKIDLISDL-EDGTITCYQQG 117

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           E+ DLCRGPHV +  Q+K F KL+K +GAYW+GD++  ML RIYG  + T +EL  +L+ 
Sbjct: 118 EFIDLCRGPHVDTVKQLKNF-KLLKHSGAYWKGDASNKMLQRIYGICFPTAEELEDHLHL 176

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINT 296
           LEE++KRDH+KL RE+ LF ++E   G+ F+   G  I   L ++      K++Y+ I T
Sbjct: 177 LEEAKKRDHKKLGRELGLFMMSEFAPGMPFFLPNGMIIRNLLENFWYEEHTKENYQFIKT 236

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P ++ + LW+ SGHW++Y+ NM+       T+ D R FA+KPMNCPG + VF +GL SY+
Sbjct: 237 PIMMSKELWEVSGHWENYKENMYT------TMVDDREFAIKPMNCPGSLLVFKNGLHSYK 290

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +LP+R+ E G V+R+E SG+L+GL RVR FTQDDAH+F   +Q+ +E +++   I  +Y 
Sbjct: 291 DLPLRMGELGQVHRHEASGALNGLFRVRTFTQDDAHIFMRPDQIESEVMQLIQFIDRVYS 350

Query: 417 DFGFEKIMVKLSTRPEKR-VGSDALWDDAENIMKGVLDTIKNSSQD-RINTGVLLGEGAF 474
            FG     ++LSTRPEK+ +G  A+W+ +E   K + D   ++ +D ++N G    +GAF
Sbjct: 351 VFGL-SYRIELSTRPEKKYIGDLAIWEQSE---KALADACVHAGKDYKVNPG----DGAF 402

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK ++ +KD++GR+WQCGTIQ+D NLP RF+  YV     K  PVM+HR +FGSIERF
Sbjct: 403 YGPKLDFHIKDSLGREWQCGTIQLDMNLPERFDLTYVEKDGSKVRPVMLHRVIFGSIERF 462

Query: 535 IGIMIENFKGNLPLWLSPIQ-AIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           IGI+IE+F G+ P+WL+P Q ++V       + YA E+   L +     + D RNE + Y
Sbjct: 463 IGILIEHFAGHFPVWLAPQQVSVVPVHHEKHLGYANEVHEKLCALGFRSKLDARNEKLGY 522

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +IRE  + KIP  ++ GD E   RS+ +RR  S  +  +SL D I ++ K
Sbjct: 523 RIREAQLSKIPYQLVIGDGEIENRSVTLRRAQSRESITMSLDDFIAMMEK 572


>gi|281420278|ref|ZP_06251277.1| threonine--tRNA ligase [Prevotella copri DSM 18205]
 gi|281405773|gb|EFB36453.1| threonine--tRNA ligase [Prevotella copri DSM 18205]
          Length = 650

 Score =  487 bits (1254), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 249/639 (38%), Positives = 393/639 (61%), Gaps = 19/639 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           +K+TFPDGS++ +    TG  +AESIS +LA+  V+  +NG+  +L+ P+ E  ++E+  
Sbjct: 2   VKITFPDGSVREYEQGITGLQIAESISPALARNVVSCGVNGETVELNRPINEDANVELYK 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF--DKEQPFSSDELAQ 121
            ED +      H+ AH++AEA+Q ++P +Q   GP +E GF+YD    + Q  S ++ A+
Sbjct: 62  FEDEQGKHTFWHTSAHLLAEALQELYPGIQFGFGPAVESGFFYDVMPAEGQVISENDFAK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE KM E+  ++ P +++ ++   A   F++  + YK E +E       +T Y QG + D
Sbjct: 122 IEAKMMELAKKNEPVVRKEVAKADALAEFKADGQTYKCEHIEQDLEDGTITTYTQGNFTD 181

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ +TG +K   K+  VAGA+WRGD+ R  ++RIYG ++  ++ L +YL  LEE+
Sbjct: 182 LCRGPHLMNTGLIKAV-KITSVAGAFWRGDAKREQMTRIYGISFPKKKMLDEYLVILEEA 240

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQV 299
           +KRDHRK+ +EM+LF  +E  G G+  W  KG ++   L   +R  +K  +Y+E+  P +
Sbjct: 241 KKRDHRKIGKEMELFMFSERVGKGLPIWLPKGTQLRLRLQELLRSLLKPYNYQEVICPGI 300

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             + L+  SGH+  Y  + F       T ++   + LKPMNCP H  V+    +SY++LP
Sbjct: 301 GGKSLYVTSGHYAHYGKDAFQ---PIQTPEEDEEYMLKPMNCPHHCEVYARKPRSYKDLP 357

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AEFG+V+R E SG LHGL RVR FTQDDAH+F   +Q+ +E   + ++I+ ++K FG
Sbjct: 358 LRIAEFGTVFRYEKSGELHGLTRVRTFTQDDAHIFVRSDQVKSEFENVIDVILKVFKIFG 417

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           FE    ++S       EK +GSD +W+++EN ++      +   +  + T   +GE AFY
Sbjct: 418 FENYEAQISLHDPKDTEKYIGSDEIWEESENAIR------EACKEKGLETREEVGEAAFY 471

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDAIGR WQ GTIQVD+NLP RF   Y    + K  PVMIHRA FGS+ERF 
Sbjct: 472 GPKLDFMVKDAIGRRWQLGTIQVDYNLPERFKLEYTAEDNSKKTPVMIHRAPFGSLERFT 531

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE+  G+ PLWL+P Q  +  I+    +YAQ++   L    +    D RNE I  KI
Sbjct: 532 AVLIEHTAGHFPLWLTPDQVAILPISEKFNDYAQKVRQYLDKQGVRALVDDRNEKIGRKI 591

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           R++ +K++P ++I G+KE++E  + +R+ G      +S+
Sbjct: 592 RDNELKRVPYMVIVGEKESAEGLVSMRKQGGGEQATMSM 630


>gi|219684484|ref|ZP_03539428.1| threonyl-tRNA synthetase [Borrelia garinii PBr]
 gi|219672473|gb|EED29526.1| threonyl-tRNA synthetase [Borrelia garinii PBr]
          Length = 593

 Score =  487 bits (1254), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 245/571 (42%), Positives = 359/571 (62%), Gaps = 16/571 (2%)

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           RHS AH+MAEAV  ++P  ++AIGP I+DGFYYDF+ ++  + D L  IE +M+EI+   
Sbjct: 27  RHSIAHVMAEAVCDLFPNTKIAIGPPIKDGFYYDFEFKKQITEDSLLDIENRMREILKTG 86

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQ 193
           S F K+ +S E+A E+F  K E YK++++++   +  +++Y+   + DLCRGPHV +  +
Sbjct: 87  SSFEKEIISLEQALEIF--KDEPYKIDLIKNFDLQNEISIYKSHNFIDLCRGPHVDNMNK 144

Query: 194 VK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLARE 252
           +  K FKL  +AGAYWRG+    ML+RIYGT WN ++EL  YL   EE +KRDHRKL +E
Sbjct: 145 IDPKAFKLTGIAGAYWRGNEKNTMLTRIYGTLWNNEKELRSYLNLREEIKKRDHRKLGKE 204

Query: 253 MDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGH 310
           +DLF I E+ G G+IF+H  G KI   +  + R +  K+ Y+ + TP V    LWQ SGH
Sbjct: 205 LDLFSIHEEIGPGLIFFHPNGAKIRALIEDFWREEHSKNGYDILFTPHVGKSWLWQTSGH 264

Query: 311 WDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYR 370
            D Y+ +MF     D +      + LKPMNCP H+A++N G  SYR+LP R AE G+VYR
Sbjct: 265 LDFYKDSMFEKIEMDKS-----DYYLKPMNCPFHIAIYNTGKHSYRDLPFRWAELGTVYR 319

Query: 371 NEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR 430
            E  G+LHG+MR RGFTQDDAH+ CT  Q+ +E  ++    I ++  FGF  +   LST+
Sbjct: 320 YEKIGALHGMMRARGFTQDDAHIICTHSQVVDEIKEVLRFAIYMWSKFGFSSLKAYLSTK 379

Query: 431 PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRD 490
           P+K VG+D  W+ +  +++  L      S   +   +  G GAFYGPK +  + D++ R+
Sbjct: 380 PDKSVGNDYDWEMSLKVLEEAL------SNFEVPYEIDKGGGAFYGPKIDLKIVDSLERE 433

Query: 491 WQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL 550
           WQ  TIQ DFNLP RFN  Y     ++  P MIHRA+ GSIERF GI++E++ G  PLWL
Sbjct: 434 WQMSTIQFDFNLPERFNMTYTAEDGKEKRPFMIHRALLGSIERFFGILVEHYGGAFPLWL 493

Query: 551 SPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           SP+QA++  + ++  +Y  ++ N  K+  + I+ D  +  +N KIRE+  KKIP + I G
Sbjct: 494 SPVQAVIIPVNNTVEDYTIKVLNKFKNAGIRIKLDNSSSRMNAKIREYQAKKIPYMFIIG 553

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           ++EA E  I IR   +     + L +A+ ++
Sbjct: 554 EREAIEEKISIRTRTNEQINGIELDEALKLI 584


>gi|149173541|ref|ZP_01852171.1| threonyl-tRNA synthetase [Planctomyces maris DSM 8797]
 gi|148847723|gb|EDL62056.1| threonyl-tRNA synthetase [Planctomyces maris DSM 8797]
          Length = 726

 Score =  487 bits (1254), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 262/706 (37%), Positives = 400/706 (56%), Gaps = 72/706 (10%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR------EGS 58
           I++  PDG++K +   ++  DVA+SI   LA   VA  ++G VCD   P++      E S
Sbjct: 2   IQIKLPDGTVKEYADDSSALDVAQSIGERLANAVVAAEVDGTVCDAFRPLKDITDSEEIS 61

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           + ++T  D  +L V+RHSCAHIMA AV  +WP +Q+A GP +  GFYYDF  E   S D+
Sbjct: 62  LRLLTERDAEALGVMRHSCAHIMARAVMRLWPGIQLAFGPTLPHGFYYDFGLEHTISEDD 121

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQG 177
             +IE++M++II  + PF +  L  ++A        +  K E +++  A    ++ YRQG
Sbjct: 122 FPKIEEEMKKIIKEEEPFERFSLDRDEAVSFVNEMDQHSKAEHIQTGLADHGKLSFYRQG 181

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           E+ DLCRGPH+ + G+VK F KL+ +AG+YW+GD+    L R+YGTAW +++++ QYL  
Sbjct: 182 EFVDLCRGPHIPNAGKVKAF-KLLSIAGSYWKGDAGNKPLQRLYGTAWFSKKDMKQYLEQ 240

Query: 238 LEESEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEIN 295
           +EE+++RDHR L +++ LF I  E G G+  W  KG  I   L  +++ ++ +  Y+ + 
Sbjct: 241 VEEAKRRDHRVLGKKLGLFSINPEVGQGLCLWLPKGATIRAVLEDFIKVELTRLGYQPVY 300

Query: 296 TPQVLDQHLWQQSGHWDSYR----ANMFA------------------------------- 320
           +P +    L++ SGH+  YR    A +F                                
Sbjct: 301 SPHIGRVELYETSGHFPYYRDSQFAPLFGHDAGQLVDFWVRKLEEDSLSAEDEELFFKSS 360

Query: 321 --VKC---------ADDTIKDLRT-------FALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             + C          ++ +K L+        + LKPMNCP H  ++    +SYR+LPVRL
Sbjct: 361 RVMNCDFEFPPGASREEKLKILKAWEHKHERYLLKPMNCPHHAEMYKSMPRSYRDLPVRL 420

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFG+VYR+E +G L+G++RVRG TQDDAH+FCT EQ+  E      L+  +    G + 
Sbjct: 421 AEFGTVYRHEQTGELNGMLRVRGLTQDDAHIFCTPEQVEEEFRATLELVKFVLASVGLDN 480

Query: 423 IMVKLSTR---PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
             V+LS R    +K VGS+  W  AEN ++ VL+    S  +        GE AFYGPK 
Sbjct: 481 FRVQLSLREPGSDKYVGSEENWQHAENSLRKVLEASGMSYSE------CEGEAAFYGPKA 534

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           ++++ D IGR+WQ GT+Q+D+NLP RF   Y  S ++   PVMIHRA FGS+ERF G++I
Sbjct: 535 DFMVSDCIGREWQLGTVQLDYNLPERFKLEYTGSDNQPHRPVMIHRAPFGSMERFTGMLI 594

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E+F G  PLWL+P Q  V  ++   ++YA E+   L+ +   +  D R+  +N KIR+  
Sbjct: 595 EHFAGAFPLWLAPEQIRVLPVSDKTLDYANEVVAQLRKNGFRVSIDTRSSKVNAKIRDAQ 654

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           ++ IP + I G KEA + ++ +R         + L DAI  L +E+
Sbjct: 655 LELIPYMFIVGPKEAEQTAVAVRDRIDGDLGPMPLADAIAKLKQEA 700


>gi|303237224|ref|ZP_07323794.1| threonine--tRNA ligase [Prevotella disiens FB035-09AN]
 gi|302482611|gb|EFL45636.1| threonine--tRNA ligase [Prevotella disiens FB035-09AN]
          Length = 649

 Score =  487 bits (1254), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 251/631 (39%), Positives = 386/631 (61%), Gaps = 19/631 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           +K+TFPDGSI+ +    TG  +AESIS +LA+  V+  +NG   +L+ P+ E  +I +  
Sbjct: 2   VKITFPDGSIREYEQGITGLQIAESISPALARNVVSCGVNGVTTELNRPINEDATIALYK 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE--QPFSSDELAQ 121
            +D        HS AH++AEA++ ++P +Q   GP IE+GF+YD      Q  S ++  +
Sbjct: 62  FDDEEGKHTFWHSSAHLLAEALKELYPGIQFGFGPAIENGFFYDVQTADGQAISENDFPK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE KM E+  +DSP +++ +S   A + F +  + YKVE +        ++ Y QG + D
Sbjct: 122 IEAKMLELAKKDSPIVRRDVSKADAVKEFTADGQEYKVEHIVEDLEDGTISTYSQGNFTD 181

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ STG +K   KL  VAGA+WRGD+N   L+RIYG  +  ++ L +YL  LEE+
Sbjct: 182 LCRGPHLTSTGAIKAV-KLTSVAGAFWRGDANSNQLTRIYGITFPKKKMLDEYLVMLEEA 240

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQV 299
           +KRDHRK+ ++M+LF  +E  G G+  W  KG ++   L   +R+  +   Y+E+ TP +
Sbjct: 241 KKRDHRKIGKDMELFMFSERVGKGLPIWLPKGTQVRLRLQEVLRKLQRPYHYQEVITPGI 300

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             ++L+  SGH+  Y  + F       T ++   + LKPMNCP H  +F H  +SY++LP
Sbjct: 301 GGKNLYVTSGHYAHYGKDAFQ---PIQTPEEGEEYMLKPMNCPHHCEIFAHKPRSYKDLP 357

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AEFG+V+R E SG LHGL RVR FTQDDAH+F   EQ+  E   + ++I  ++  FG
Sbjct: 358 LRIAEFGTVFRYEKSGELHGLTRVRTFTQDDAHLFVRPEQVKKEFEDVIDIIQKVFITFG 417

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           FE    ++S R     EK +GSD +W+++E  +K      +   +  +   V +GE AFY
Sbjct: 418 FENYEAQISLRDPDDKEKYIGSDEIWEESERAIK------EACEEKGLKARVEIGEAAFY 471

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDAIGR WQ GTIQVD+NLP+RF   Y    + K  PVMIHRA FGS+ERF 
Sbjct: 472 GPKLDFMVKDAIGRRWQLGTIQVDYNLPNRFKLEYTAEDNTKQTPVMIHRAPFGSLERFT 531

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE+  G+ PLWL+P Q  +  I+     YA+E+    +++ +    D RNE I  KI
Sbjct: 532 AVLIEHTAGHFPLWLTPDQVAILPISEKYNGYAEEVRAYFEANEVRAIVDDRNEKIGRKI 591

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGS 626
           R++ +K++P ++I G++E ++  + +R+ G 
Sbjct: 592 RDNELKRVPYMVIVGEQEMADGLVSMRQQGG 622


>gi|221217966|ref|ZP_03589433.1| threonyl-tRNA synthetase [Borrelia burgdorferi 72a]
 gi|224533347|ref|ZP_03673941.1| threonyl-tRNA synthetase [Borrelia burgdorferi CA-11.2a]
 gi|225549973|ref|ZP_03770934.1| threonyl-tRNA synthetase [Borrelia burgdorferi 118a]
 gi|221192272|gb|EEE18492.1| threonyl-tRNA synthetase [Borrelia burgdorferi 72a]
 gi|224513512|gb|EEF83869.1| threonyl-tRNA synthetase [Borrelia burgdorferi CA-11.2a]
 gi|225369432|gb|EEG98884.1| threonyl-tRNA synthetase [Borrelia burgdorferi 118a]
          Length = 581

 Score =  487 bits (1253), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 245/571 (42%), Positives = 357/571 (62%), Gaps = 16/571 (2%)

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           RHS AH+MAEAV  ++P  ++AIGP I+DGFYYDF+ ++  + D L  IE +M+EI+   
Sbjct: 15  RHSIAHVMAEAVLDLFPNTKIAIGPPIKDGFYYDFEFKKQITEDSLLDIENRMREILKTG 74

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQ 193
           S F K+ +S E+A E+F  K E YK++++++   +  V++Y+   + DLCRGPHV +  +
Sbjct: 75  SSFEKEIISVEQALEIF--KDEPYKIDLIKNFDLQNEVSIYKSHNFVDLCRGPHVENMNK 132

Query: 194 VK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLARE 252
           +  K FKL  +AGAYWRG    PML+RIYGT WN ++EL  YL   EE +KRDHRKL +E
Sbjct: 133 IDPKAFKLTSIAGAYWRGSEKNPMLTRIYGTLWNNEKELRSYLNLREEIKKRDHRKLGKE 192

Query: 253 MDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGH 310
           +DLF I E+ G G++F+H  G KI   +  + R +  K+ Y+ + TP +    LWQ SGH
Sbjct: 193 LDLFSIHEEIGPGLVFFHPNGAKIRALIEDFWREEHSKNGYDILFTPHIGKSWLWQTSGH 252

Query: 311 WDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYR 370
            D Y+ +MF     D +      + LKPMNCP H+A++N G  SYR+LP R AE G+VYR
Sbjct: 253 LDFYKDSMFEKIEMDKS-----DYYLKPMNCPFHIAIYNTGKHSYRDLPFRWAELGTVYR 307

Query: 371 NEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR 430
            E  G+LHG+MR RGFTQDDAH+ CT  Q+ +E  ++    I ++  FGF      LST+
Sbjct: 308 YEKIGALHGMMRARGFTQDDAHIICTHSQVLDEIKEVLRFAIYMWSKFGFSNPKAYLSTK 367

Query: 431 PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRD 490
           P+K VG+D+ W+ +  +++  L      S   +   +  G GAFYGPK +  + D++ R+
Sbjct: 368 PDKSVGNDSDWEMSLKVLEETL------SDFEVPYEIDKGGGAFYGPKIDLKIVDSLERE 421

Query: 491 WQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL 550
           WQ  TIQ DFNLP RFN  Y     ++  P MIHRA+ GSIERF GI++E++ G  PLWL
Sbjct: 422 WQMSTIQFDFNLPERFNMTYTAEDGKEKRPFMIHRALLGSIERFFGILVEHYGGAFPLWL 481

Query: 551 SPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           SP+Q ++  + +   +YA ++ N  K+  + I+ D  +  +N KIRE+  KKIP + I G
Sbjct: 482 SPVQVVIIPVNNIVEDYAIKVFNKFKNEGIRIKLDNSSSRMNAKIREYQAKKIPYMFIIG 541

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           ++EA E  I IR   +     + L +A+  +
Sbjct: 542 EREAIEERISIRTRTNEQINGMKLDEALKFI 572


>gi|322383766|ref|ZP_08057517.1| threonyl-tRNA synthetase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321151978|gb|EFX44921.1| threonyl-tRNA synthetase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 649

 Score =  487 bits (1253), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 253/630 (40%), Positives = 392/630 (62%), Gaps = 21/630 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           I++T P+G+I+ +P   T  +VA SIS  L K+AVA  ++G+  DLS P+    ++EI T
Sbjct: 2   IQVTLPNGAIREYPKGTTVGEVAASISSGLKKQAVAGKMDGQPVDLSRPIEYNAAVEIWT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPE--VQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
            +    L V RHS AH+MA+A++ I+ E  V++ IGP+IE GFYYD D E   + ++L +
Sbjct: 62  LDSEEGLEVYRHSTAHLMAQALKRIYGEKAVKLGIGPVIEGGFYYDIDMETSLTPEDLGK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK+M++II  D P  ++ +S E+A  ++E  ++  K+E++   P    +T+Y QGE+FD
Sbjct: 122 IEKEMEKIIKEDLPITRRVVSKEEAIRIYEEIEDPLKLELIHEFPEDATITIYDQGEFFD 181

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ STG++K F KL+ VAGAYWRGDS+  ML RIYGTA+  + +L ++L+ LEE+
Sbjct: 182 LCRGPHLPSTGRIKAF-KLLSVAGAYWRGDSDNKMLQRIYGTAFPKKSQLEEHLHLLEEA 240

Query: 242 EKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           +KRDHRKL +++ +F  + E G G+  W   G  I +TL  Y+   + K  Y+ + TP +
Sbjct: 241 KKRDHRKLGKDLKIFSFSREVGQGLPLWLPNGATIRRTLERYIVDLEEKLGYQHVYTPVL 300

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +  L++ SGHW+ YR +MF     D+         L+PMNCP H+ V+ + L SYR+LP
Sbjct: 301 ANVDLYKTSGHWEHYREDMFPPMQLDN-----EELVLRPMNCPHHMMVYKNELHSYRDLP 355

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G+++R E SG+L GL RVR  T +DAH+FC  +Q+  E  ++  LI  +Y DFG
Sbjct: 356 IRIAELGTMHRYEMSGALTGLHRVRAMTLNDAHIFCRPDQIKEEFARVITLIRQVYADFG 415

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R     +K   +D +W+ ++ ++K V++ +      R+      GE AFY
Sbjct: 416 ITDYRFRLSYRDPQDTDKYFPNDEMWEMSQRMLKEVVEEL------RLPYYEAEGEAAFY 469

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+ ++    T Q+DF LP RF   YV    +K  PV+IHR +  ++ER  
Sbjct: 470 GPKLDVQIKTALKKEETLSTAQLDFLLPERFELEYVGEDGQKHRPVVIHRGIVSTMERMT 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
             ++ENF G LP WL P+QA +  ++S+  +YA+E+ + LK   + +  D RNE + YKI
Sbjct: 530 AFLLENFAGALPTWLCPVQAKILPVSSAFNDYAKEMEDRLKQAGIRVAADLRNEKLGYKI 589

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFG 625
           RE  ++K+P +++ G+ E    S  +RR G
Sbjct: 590 RESQLEKVPFMLVVGENEKQSGSFSVRRRG 619


>gi|307150016|ref|YP_003885400.1| threonyl-tRNA synthetase [Cyanothece sp. PCC 7822]
 gi|306980244|gb|ADN12125.1| threonyl-tRNA synthetase [Cyanothece sp. PCC 7822]
          Length = 608

 Score =  487 bits (1253), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 248/584 (42%), Positives = 365/584 (62%), Gaps = 18/584 (3%)

Query: 69  SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQE 128
           +L  IRH+ +HIMA AVQ ++P+ QV IGP  E+GFYYDFD  QPFS ++L  I+K+M +
Sbjct: 26  NLKRIRHTASHIMAMAVQQLFPKAQVTIGPWTENGFYYDFDTPQPFSEEDLKAIKKEMVK 85

Query: 129 IIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG-EWFDLCRGPH 187
           II R  P +++ +S ++A    ++  E YK+EILE I  +E +TLY  G +W+DLC GPH
Sbjct: 86  IIKRKLPVIREEVSRQEAERRIKAINEPYKLEILEGI--QEPITLYHLGDQWWDLCAGPH 143

Query: 188 VRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDH 246
           V ST  +  K  +L  VAGAYWRGD  +  L RIYGTAW T ++L +Y    EE+ KRDH
Sbjct: 144 VESTADIDPKAIELETVAGAYWRGDETKAQLQRIYGTAWETPEQLAEYKRRKEEALKRDH 203

Query: 247 RKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHL 304
           RKL RE+ LF  ++  G G+  W  KG  I  TL  ++++ ++K  Y  + TP +    L
Sbjct: 204 RKLGRELGLFIFSDVVGPGLPLWTPKGTIIRTTLEEFLKKEQVKRGYLPVVTPHLARVDL 263

Query: 305 WQQSGHWDSYRANMFAVKCADD--TIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
           ++ SGHW +Y+ +MF +   D+   + ++  F LKPMNCP H+ ++   L+SYR+LP+RL
Sbjct: 264 FKISGHWQNYKEDMFPMMAEDEESALHEI-GFVLKPMNCPFHIQIYKSELRSYRDLPMRL 322

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFG+VYR E SG L GL RVRGFT DD+H+F T EQ+  E L + +LI+S++K    + 
Sbjct: 323 AEFGTVYRYEQSGELGGLTRVRGFTVDDSHLFVTPEQLEEEFLSVVDLILSVFKSLQLKN 382

Query: 423 IMVKLSTR---PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
              +LS R    +K +G D +W+ AEN ++  +  +     +        GE AFYGPK 
Sbjct: 383 FKARLSFRDPASDKYIGGDDVWNKAENAIRSAVQKMNMEHFE------APGEAAFYGPKL 436

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           ++I +DA+ R+WQ GT+QVD+NLP RF+  YV     +  PVMIHRA FGS+ER +GI+I
Sbjct: 437 DFIFQDALEREWQLGTVQVDYNLPERFDLEYVAEDGSRKRPVMIHRAPFGSLERLVGILI 496

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E + G+ PLWL+PIQ  +  ++   +++A+E+A  L S  +  E D   E +   IR   
Sbjct: 497 EEYAGDFPLWLAPIQVRLLPVSDPQLDFAKEVAAQLLSQGIRAEADTSGERLGKMIRNAE 556

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +KIP++ + G KE    ++ IR   S     +++ + I  +T+
Sbjct: 557 KQKIPVMAVVGAKEVESNTLSIRTRASGELGTIAVSEVIEKVTE 600


>gi|325972697|ref|YP_004248888.1| threonyl-tRNA synthetase [Spirochaeta sp. Buddy]
 gi|324027935|gb|ADY14694.1| threonyl-tRNA synthetase [Spirochaeta sp. Buddy]
          Length = 581

 Score =  487 bits (1253), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 240/556 (43%), Positives = 350/556 (62%), Gaps = 16/556 (2%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           L+ IRHS AH+MAEAV  ++P  Q+ IGP I++GFYYDFD  +   +D+L +I  +M+ I
Sbjct: 10  LSRIRHSMAHVMAEAVLQMFPSAQITIGPAIDNGFYYDFDLPRQLVNDDLEEIAARMKAI 69

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
           IA   PF++  +S  +AR+ F    + YK+E+L++I   E V+LY QG + DLCRGPHV 
Sbjct: 70  IAEGKPFVRTVVSRAEARKQFAD--QTYKLELLDAIAEGEEVSLYSQGGFTDLCRGPHVE 127

Query: 190 STGQVKK-FFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRK 248
           ST ++K   FKLM +AGAYWRG    PML+RIYGTAW   ++L  YL  LE+ EKRDHRK
Sbjct: 128 STKELKADAFKLMSIAGAYWRGKETNPMLTRIYGTAWANAKDLRLYLQHLEDVEKRDHRK 187

Query: 249 LAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQ 306
           L +E+DLF + E+ G G+++WH  G +I Q++ ++ R +   + YE + TP +    LW+
Sbjct: 188 LGKELDLFSLHEEAGPGLVYWHPMGARIRQSIENFWRSEHYANGYEMVYTPHIGRSWLWE 247

Query: 307 QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFG 366
            SGH D Y+  M+     D +      + +KPMNCP H+ ++ +   SYR+LP R AE G
Sbjct: 248 TSGHLDFYKDGMYPPMEMDKS-----DYYVKPMNCPFHIMIYKNSKHSYRDLPCRWAELG 302

Query: 367 SVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK 426
           +VYR E +G++HGLMRVRGFTQDDAH+F T +QM +E L++    + +   FGF +I   
Sbjct: 303 TVYRYEKAGAMHGLMRVRGFTQDDAHLFVTPDQMNDEILEVLRFSLHMLHSFGFTEINAY 362

Query: 427 LSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDA 486
           LST+PEK VG  A W  A   ++  +        + ++  +  G GAFYGPK +  +KDA
Sbjct: 363 LSTKPEKSVGDPARWAAATEALRQAI------VAEGLSYEIDEGGGAFYGPKIDLKIKDA 416

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNL 546
           IGR+WQ  T+Q DFN P RF+  +V+    +  P MIHRA+ GSIERF G++IE++ G  
Sbjct: 417 IGREWQLSTVQFDFNEPERFDMTFVDKDGVEKRPYMIHRALLGSIERFFGVLIEHYAGAF 476

Query: 547 PLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPII 606
           P WLSP Q  +  +  +  +YA+++   L+     +  D  ++ +N KIR     KIP +
Sbjct: 477 PPWLSPEQIKLIPVGENFFDYAKDLEKRLRKEGFRVSADLGDDRMNAKIRNAQQLKIPYM 536

Query: 607 IICGDKEASERSIGIR 622
           +I G++EA    + +R
Sbjct: 537 VIIGEREAQNDQVSVR 552


>gi|187918575|ref|YP_001884138.1| threonyl-tRNA synthetase [Borrelia hermsii DAH]
 gi|238689297|sp|B2S162|SYT_BORHD RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|119861423|gb|AAX17218.1| threonyl-tRNA synthetase [Borrelia hermsii DAH]
          Length = 583

 Score =  487 bits (1253), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 245/569 (43%), Positives = 357/569 (62%), Gaps = 17/569 (2%)

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           RHS AH+MAEAV  ++P  ++AIGP I+DGFYYDFD E+  + D+L  IE+KM+EI+   
Sbjct: 15  RHSIAHVMAEAVLELFPNTKIAIGPPIKDGFYYDFDFEKHITEDDLLLIEQKMREILKTG 74

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQ 193
           SPF+K+ ++ E+A  LF  K E YK++++  +   + +++Y+   + DLC+GPHV + G+
Sbjct: 75  SPFVKEVITKEQALMLF--KDEPYKMDLIRGLAITDEISIYKSHNFTDLCKGPHVDNMGK 132

Query: 194 VK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLARE 252
           +  K FKL  +AGAYWRGD    ML+RIYGT WN +++L  YL   EE ++RDHRKL RE
Sbjct: 133 IDPKAFKLTSIAGAYWRGDEKNKMLTRIYGTLWNNEKDLKAYLKLREEIKRRDHRKLGRE 192

Query: 253 MDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGH 310
           +DLF + ED G G+IF+H  G +I   +  + R +  K+ Y+ + TP +    LW+ SGH
Sbjct: 193 LDLFSVHEDIGPGLIFFHPNGARIRAIIEDFWREEHFKNGYDVLFTPHIGKSCLWETSGH 252

Query: 311 WDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYR 370
            D Y+ +MF     D +      + +KPMNCP H+A++N G  SYR+LP R AE G+VYR
Sbjct: 253 LDFYKESMFEKMEMDKS-----NYYVKPMNCPFHIAIYNTGKHSYRDLPFRWAELGTVYR 307

Query: 371 NEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR 430
            E  G+LHG MRVRGFTQDDAH+ C  EQ+ +E  ++    + ++  FGF  +   LST+
Sbjct: 308 YEKIGALHGTMRVRGFTQDDAHIICAYEQVKSEVQEVLRFALYMWNQFGFADLKAYLSTK 367

Query: 431 PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRD 490
           PEK VG    W+ +  +++  L  +       I   +  G GAFYGPK +  + D++GR+
Sbjct: 368 PEKAVGDKDDWEMSVKVLEEALIDLN------IAYDIDEGGGAFYGPKIDLKIIDSLGRE 421

Query: 491 WQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL 550
           WQ  TIQ DFNLP RF   Y     ++  P MIHRA+ GSIERF GI++E++ G  P+WL
Sbjct: 422 WQMSTIQFDFNLPERFKMTYTAEDGKEKRPFMIHRALLGSIERFFGILVEHYGGAFPVWL 481

Query: 551 SPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIIC 609
           +P+Q I+  + +   EYA EI +L K+  + I+ D   N  +N KIR++  KK+P + I 
Sbjct: 482 APLQVIIIPVNNVVEEYALEILSLFKNEGIRIKLDNDCNMRMNAKIRQYQSKKVPYMFII 541

Query: 610 GDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           G+KE  E  I IR   +     + L +A+
Sbjct: 542 GEKEVVEGKISIRTRTNDQINGLELKEAL 570


>gi|868027|gb|AAC43605.1| threonyl-tRNA synthetase [Buchnera aphidicola]
 gi|1098080|prf||2115235B Thr-tRNA synthetase
          Length = 642

 Score =  487 bits (1253), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 247/616 (40%), Positives = 378/616 (61%), Gaps = 29/616 (4%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPE 65
           + F DGS + +        + E    ++ +  +A+++N    + +  + E  SI  I+ +
Sbjct: 4   IRFCDGSQQVYKHSVLIERIIEIKKPNIIRSLIAISVNNSFSNFNSLITEDSSISFISKK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D  +L +IR+SC  ++  A +  WP  ++    I +  F      +          +E  
Sbjct: 64  DCEALNIIRYSCIQLLNYAAKKRWPSSKIGESEITKVVFIVILILKIVLQKKIFFILENN 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENV-TLYRQGEWFDLCR 184
           M+ +I R+     Q +S + A E+F+ K E YK+ +++    K+N  +LY    +FD+  
Sbjct: 124 MKTLIKREYFISHQNISFDHAYEMFKKKSEIYKIHLIKKYINKKNKISLYYHENYFDIDM 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           G  V +    K F    K+ G YW+GD    ML RIYGTAW+T++EL ++L ++ E +KR
Sbjct: 184 GMQVFNIRFCKYFN--YKIGGIYWKGDHKNKMLQRIYGTAWSTKKELDKHLSYINELKKR 241

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEINTPQVLDQ 302
           DHRK+ + ++L+H+ ++  G+IFWH  GW IF  L  ++R K+K   +Y+E+ TP ++ +
Sbjct: 242 DHRKIGKLLNLYHMQKESPGMIFWHNNGWIIFNELEIFVREKLKGIINYKEVKTPLLIHK 301

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            +WQ+SGHWD+Y+  +F     +      R + +KPMNCPGHV +FN GLKSYR+LP+R+
Sbjct: 302 SIWQKSGHWDNYQDRIFTTSSEN------REYCIKPMNCPGHVQIFNCGLKSYRDLPIRM 355

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM---FNECLKIHNLIISIYKDFG 419
           AEFGS +RNE SGSLHGLMR+R FTQDDAH+FCT+EQ+    N C+K   +I  +Y  F 
Sbjct: 356 AEFGSCHRNESSGSLHGLMRIRNFTQDDAHIFCTQEQLRYEINNCIK---MIYDLYSTFN 412

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL--DTIKNSSQDRINTGVLLGEGAFYGP 477
           F+KI+VK STRP+KR+G +++WD AE  +  VL  + +K   Q+        GEGAFYGP
Sbjct: 413 FKKILVKFSTRPKKRIGDESVWDQAEKDLSDVLIENNLKFEHQE--------GEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E++L+D++ R+WQCGTIQ+DF LP R  +FY++ H+ +  P++IHRA+ GSIERFIGI
Sbjct: 465 KIEFVLQDSLDRNWQCGTIQLDFYLPIRLRSFYIDEHNHQKIPIIIHRAILGSIERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE F+  +P WLSPIQ ++ +IT S + Y ++I       ++ +E+D RNE I +KIR 
Sbjct: 525 LIEEFQ-EIPTWLSPIQVVILSITDSHINYVKKIVQHFSDINIRVESDLRNEKIGFKIRA 583

Query: 598 HSIKKIPIIIICGDKE 613
             I    I I    KE
Sbjct: 584 TYIASNSIYINLWRKE 599


>gi|328881181|emb|CCA54420.1| Threonyl-tRNA synthetase [Streptomyces venezuelae ATCC 10712]
          Length = 640

 Score =  486 bits (1252), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 261/635 (41%), Positives = 379/635 (59%), Gaps = 44/635 (6%)

Query: 36  KKAVAVAINGKVCDLSDPVREGSI-EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           +  +A  + G++ DLS  + +G + E +    P  L ++RHS AH+MA+AVQ ++PE ++
Sbjct: 15  RTVIAARVGGELKDLSYELADGDVVEGVEISSPDGLDILRHSTAHVMAQAVQELFPEAKL 74

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            IGP + DGFYYDFD E+PF+ ++L  IEKKMQEI  R   F ++ ++ E AR   E   
Sbjct: 75  GIGPPVRDGFYYDFDVEKPFTPEDLKVIEKKMQEIQKRGQRFARRVVTDEDARA--ELAD 132

Query: 155 EAYKVEIL-----ESIPAKENV-------TLY-----RQGE--WFDLCRGPHVRSTGQVK 195
           E YK+E++      S     NV       T+Y     + GE  W DLCRGPH+ +T  + 
Sbjct: 133 EPYKLELIGIKGSASTDDGANVEVGGGELTIYDNLDAKTGELCWKDLCRGPHLPTTRNIP 192

Query: 196 KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDL 255
            F KLM+ A AYWRG    PML RIYGTAW ++ EL  +L FL E+EKRDHRKL  E+DL
Sbjct: 193 AF-KLMRNAAAYWRGSEKNPMLQRIYGTAWPSKDELKAHLDFLAEAEKRDHRKLGNELDL 251

Query: 256 FHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHLWQQSGHWDS 313
           F I ++ GSG+  +H KG  I + +  Y R++ +++ YE + +P      L+++SGH D 
Sbjct: 252 FSIPDEIGSGLAVFHPKGGIIRRVMEDYSRKRHEEEGYEFVYSPHATKGKLFEKSGHLDW 311

Query: 314 YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP 373
           Y   M+     D+ +     + LKPMNCP H  +F+   +SYRELP+RL EFG+VYR E 
Sbjct: 312 YAEGMYPPMQLDEGVD----YYLKPMNCPMHNLIFDARGRSYRELPLRLFEFGTVYRYEK 367

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR-PE 432
           SG +HGL R RGFTQDDAH++CTKEQM  E  K    ++++ +D+G     ++LST+ PE
Sbjct: 368 SGVVHGLTRARGFTQDDAHIYCTKEQMAEELDKTLTFVLNLLRDYGLTDFYLELSTKDPE 427

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL----GEGAFYGPKFEYILKDAIG 488
           K VGSD +W++A  +++ V +            G+ L    G  AFYGPK     +DAIG
Sbjct: 428 KFVGSDEIWEEATAVLQQVAE----------KQGLPLTPDPGGAAFYGPKISVQARDAIG 477

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPL 548
           R WQ  T+Q+DFNLP RF+  Y      K  PVMIHRA+FGSIERF  +++E++ G +P 
Sbjct: 478 RTWQMSTVQLDFNLPERFDLEYTAPDGTKQRPVMIHRALFGSIERFFAVLLEHYAGAMPP 537

Query: 549 WLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIII 608
           WL+P+QA    I  + V+Y  E A   K   L ++ D  ++ +  KIR    +K+P +II
Sbjct: 538 WLAPVQATGIPIGDAHVDYLHEFAAKAKKQGLRVDVDSSSDRMQKKIRNAQKQKVPFMII 597

Query: 609 CGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            GD++ +  ++  R    +    + + +AI  + K
Sbjct: 598 AGDEDMAAGAVSFRYRDGSQENGIPVDEAIAKIAK 632


>gi|282890339|ref|ZP_06298867.1| hypothetical protein pah_c016o048 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281499721|gb|EFB42012.1| hypothetical protein pah_c016o048 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 641

 Score =  486 bits (1252), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 254/617 (41%), Positives = 375/617 (60%), Gaps = 35/617 (5%)

Query: 17  FPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIRH 75
            P  +T  D+A+ +  +   +AV V +NGK  DL+ P+++G +I   + +DP+   V  H
Sbjct: 15  LPEESTAKDLADKLHLNGPSQAVGVNVNGKAVDLTYPLKDGDAITFWSFDDPQGKEVFWH 74

Query: 76  SCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSP 135
           + AH++A+A+  IWP+ Q  IGP IE+GFYYDF      S  +  +IE++M+ II  +  
Sbjct: 75  TSAHVLAQAILRIWPDAQPTIGPPIENGFYYDFGN-LTISDQDFEKIEEQMRLIIEEN-- 131

Query: 136 FLKQYLSHEKARELFESKKEA--------YKVEILESIPAKENVTLYRQGEWFDLCRGPH 187
               YLS    RE F +K+EA        +K E++ S P    ++ YRQGE+FDLCRGPH
Sbjct: 132 ----YLS---KRESFANKEEALQAFAHNPFKQELIRSFPEDAELSGYRQGEFFDLCRGPH 184

Query: 188 VRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHR 247
           + + G++K   K++K +GAYWRG+    ML+R+Y   +  ++ L  YL  +EE++KRDH+
Sbjct: 185 LYNLGKIKAL-KVLKTSGAYWRGNHENEMLTRVYAITFPDRKMLKDYLTSVEEAKKRDHK 243

Query: 248 KLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ 306
            L  ++DLF + E+  G+ F H KG  I+  L++Y+R+ + D +Y EI TP ++ + LW+
Sbjct: 244 VLGAKLDLFSLKEEAPGMPFIHPKGTIIWNELLAYLRQCLDDKNYIEIKTPTMMTRDLWE 303

Query: 307 QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFG 366
            SGHW +YR NMF  +  +      R FA+KPMNCPG +  +   + SYRELP+R+AE G
Sbjct: 304 LSGHWSNYRQNMFTSEIEN------RDFAIKPMNCPGCMLYYRGQIHSYRELPLRVAEIG 357

Query: 367 SVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK 426
           +V+R EPSGSL GL RVR F QDDAH+F     + +E L + NL   IY  FG     ++
Sbjct: 358 NVHRFEPSGSLSGLFRVRSFHQDDAHIFMKPSDIRSEILNVLNLAHEIYSTFGL-TYRLE 416

Query: 427 LSTRPEKR-VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKD 485
           LSTRPEK  +G+D  W+ A   +K  LD  +     RIN G    +GAFYGPK ++ ++D
Sbjct: 417 LSTRPEKNTIGTDKEWEIATEGLKNALD--ETGRPYRINEG----DGAFYGPKIDFHIQD 470

Query: 486 AIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           AI R WQCGTIQ+D  LP +F   Y      +  PVMIHRA+FGSIERF GI+IE+F G 
Sbjct: 471 AINRTWQCGTIQLDMALPEKFELEYTAEDGSRQRPVMIHRAIFGSIERFFGILIEHFSGR 530

Query: 546 LPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPI 605
            PLW+SP+Q  +  +    VEYA+ +    K      + D  NE+++ K+R   + +I  
Sbjct: 531 FPLWISPLQVRLIPVADRHVEYARTLRKQFKQAGFHCDIDESNESVSKKVRNAQLSQINY 590

Query: 606 IIICGDKEASERSIGIR 622
           ++  GD+E    ++ +R
Sbjct: 591 MLTVGDQEVQNHTVNLR 607


>gi|308233449|ref|ZP_07664186.1| threonyl-tRNA synthetase [Atopobium vaginae DSM 15829]
 gi|328944509|ref|ZP_08241970.1| threonine--tRNA ligase [Atopobium vaginae DSM 15829]
 gi|327490910|gb|EGF22688.1| threonine--tRNA ligase [Atopobium vaginae DSM 15829]
          Length = 592

 Score =  486 bits (1252), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 250/575 (43%), Positives = 360/575 (62%), Gaps = 23/575 (4%)

Query: 72  VIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD--FDKEQPFSSDELAQIEKKMQEI 129
           VIRHSCAH++A+AV+ ++P+   A GP  E GFYYD  F +    S D+L  +E +M++I
Sbjct: 21  VIRHSCAHMLAQAVKRLYPQAHFAYGPATETGFYYDMEFPEGVKISEDDLPALEAEMKKI 80

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
              +       L   +A    E + E +KVE +   P    +T Y+QGE+ D+C GPHV 
Sbjct: 81  SKENLKVETFELPRAQAIAFLEERGEKFKVEHIGDFPEDTRLTFYKQGEYVDMCTGPHVC 140

Query: 190 STGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKL 249
            T ++ K FKL  V+GAYW+ +S+  ML+RI G A+ T++EL ++   + E+EKRDHRK+
Sbjct: 141 YT-KMAKAFKLTGVSGAYWKANSDNEMLTRISGVAFVTKEELAEHERLMAEAEKRDHRKI 199

Query: 250 AREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQS 308
            REMDLF + E G G  FW   G +I   L++Y +  + K  YE+I TP +L + LW+ S
Sbjct: 200 GREMDLFMVNEAGPGFPFWLPNGMRIRNALMNYWQEMQEKFGYEQIQTPVILSRKLWETS 259

Query: 309 GHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV 368
           GHWD Y+ NM+  K       D   FA+KPMNCPG   V+ +  +SYR+LP++LAE G  
Sbjct: 260 GHWDHYKENMYTTKI------DEEDFAIKPMNCPGACLVYMNKPRSYRDLPLKLAEAGLD 313

Query: 369 YRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLS 428
           +R+E  G+LHGL RVR FTQDDAH+F   +Q+ +E  ++ +LI + YK FGF    V+LS
Sbjct: 314 HRHELKGTLHGLFRVREFTQDDAHLFIRPDQICDEVAEVTHLITAYYKQFGF-PYKVELS 372

Query: 429 TRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIG 488
           TRPE  +GSD  W  AE+ ++  L+T+       +   +  G+GAFYGPK ++ LKD +G
Sbjct: 373 TRPENSMGSDEDWKTAEDGLRNALETMG------LEYTINEGDGAFYGPKIDFHLKDCLG 426

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPL 548
           R WQCGTIQ+DF  P  FN  YV+   +K  P+MIHRA FGS ERFIG++IE ++G  P+
Sbjct: 427 RTWQCGTIQLDFQFPHNFNLEYVDKDGQKKRPIMIHRAGFGSFERFIGMLIEQYEGKFPV 486

Query: 549 WLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE-HSIKKIPIII 607
           WL+P+Q  V  ++     YA+E+   L+   + ++ D R+E I YKIRE  SI ++P ++
Sbjct: 487 WLAPLQVKVLPVSEKTRAYARELTQKLRDLKIRVKLDDRDEKIGYKIREARSIDRVPYML 546

Query: 608 ICGDKEASERSIGIRRFGSTTTQK-----VSLLDA 637
           I G++EA   +I +R   +TT Q      V+LL A
Sbjct: 547 IVGEQEAQAGNISVRDRTNTTKQYAFDDFVALLQA 581


>gi|62185526|ref|YP_220311.1| threonyl-tRNA synthetase [Chlamydophila abortus S26/3]
 gi|73919780|sp|Q5L4T1|SYT_CHLAB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|62148593|emb|CAH64365.1| threonyl-tRNA synthetase [Chlamydophila abortus S26/3]
          Length = 635

 Score =  486 bits (1251), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 260/609 (42%), Positives = 371/609 (60%), Gaps = 21/609 (3%)

Query: 17  FPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIRH 75
            P   T +D A  I  S       V IN ++ DLS  + EG ++  +T  DP    +  H
Sbjct: 13  LPQGTTAADFASKIKNS--HYFAGVVINDQIKDLSTTLNEGDTLRFVTFTDPEGREIFLH 70

Query: 76  SCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSP 135
           + AHI+A+A+  +WP+    IGP+I+ GFYYDF      S D+   IE  M +I A +  
Sbjct: 71  TSAHILAQAILRLWPDAIPTIGPVIDQGFYYDF-ANLSISEDDFLMIENMMGQI-AEEKF 128

Query: 136 FLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVK 195
            +++   + K   L E  +  +KVE+++ +P  E++T Y QGE+ DLCRGPH+ STG VK
Sbjct: 129 AVQKKTFNSKHEALEEFARNPFKVELIKELPEGESITAYSQGEFMDLCRGPHLPSTGPVK 188

Query: 196 KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDL 255
            F KL++ + AYWRGD  R  L RIYG A+ T +EL ++L+ L+E++KRDHR L  ++DL
Sbjct: 189 AF-KLLRTSAAYWRGDPQRESLVRIYGVAFPTTKELKEHLHQLKEAKKRDHRVLGMKLDL 247

Query: 256 FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSY 314
           F   E  +G+ F+H +G  I+  LI Y +R  +   Y+EI TPQ++ + LW+ SGHW +Y
Sbjct: 248 FSQQECSAGMPFFHPRGMIIWDALIGYWKRLHQLAGYKEIQTPQLMSRSLWEVSGHWSNY 307

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
           R NM+ +K  D+       +A+KPMNCPG +  +   L SY++ P+R+AE G V+R E S
Sbjct: 308 RENMYTLKIEDED------YAIKPMNCPGCMLYYKTRLHSYKQFPLRIAEIGHVHRYEVS 361

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK- 433
           G+L GLMRVR F QDDAHVF T EQ+  E L I +L+  +Y  FG E   ++LSTRPEK 
Sbjct: 362 GALSGLMRVRAFHQDDAHVFLTPEQVEEETLNILHLVSELYSTFGLE-YHLELSTRPEKA 420

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
            +GSD LW+ A   ++  L  + + +   IN G    +GAFYGPK +  +KDAI R WQC
Sbjct: 421 TIGSDELWELATAALERAL--VNSHTPFIINPG----DGAFYGPKIDIHVKDAIQRTWQC 474

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI 553
           GTIQ+D  LP RF   Y N+  EK  PVM+HRA+FGSIERF+GI+IE+FKG  PLWLSP 
Sbjct: 475 GTIQLDMFLPERFELEYTNAQGEKSTPVMLHRALFGSIERFLGILIEHFKGRFPLWLSPE 534

Query: 554 QAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
              V T+       AQ++A   +     +  D  NE+++ KIR     ++  ++  GD+E
Sbjct: 535 HIRVITVADRHQPRAQKLATAWQKLGFVVTVDDSNESVSKKIRNAQNMQVNYMVTLGDRE 594

Query: 614 ASERSIGIR 622
             + ++ IR
Sbjct: 595 IEQNTLAIR 603


>gi|120434969|ref|YP_860655.1| threonyl-tRNA synthetase [Gramella forsetii KT0803]
 gi|117577119|emb|CAL65588.1| threonyl-tRNA synthetase [Gramella forsetii KT0803]
          Length = 667

 Score =  486 bits (1251), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 265/638 (41%), Positives = 389/638 (60%), Gaps = 21/638 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           IK+T PDGSIK F    T  DVA+SIS  LA+  ++   N +  ++S P+  +G + + T
Sbjct: 19  IKITLPDGSIKEFEKGTTPMDVAKSISEGLARNVISAKFNNETVEVSTPLNTDGDLVLFT 78

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQI 122
             +        HS +H+MA+A+Q ++P  ++ IGP IE GFYYD D  EQ  S ++  +I
Sbjct: 79  WSNDEGKKAFWHSTSHVMAQAIQDLFPGAKLTIGPAIERGFYYDVDFGEQKISDNDFKRI 138

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M EI      F  +  S + A   ++ +   +KVE++E++   E +T      + DL
Sbjct: 139 EDRMLEIARGKHDFQLREASKDDALNFYKKENNQFKVELIENLQDGE-ITFCDHDTFTDL 197

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRG H+ +TG +K   KLM VAGAYWRGD   P L+R+YG ++  Q+EL +YL  LEE++
Sbjct: 198 CRGGHIPNTGIIKAV-KLMSVAGAYWRGDEKNPQLTRVYGISFPKQKELKEYLELLEEAK 256

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           KRDHRKL +E++LF  ++  G G+  W  KG  + + L +++++ + K  YE + +P + 
Sbjct: 257 KRDHRKLGKELELFTFSQKVGQGLPLWLPKGAALRERLENFLKKAQKKAGYEMVVSPHIG 316

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            + L+  SGH+  Y  + F       T  +   F LKPMNCP H  ++N    SYR+LP 
Sbjct: 317 SKELYVTSGHYAKYGEDSFQPIS---TPNEGEEFMLKPMNCPHHCEMYNASSWSYRDLPK 373

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R AEFG+VYR E SG LHGL RVRGFTQDDAH+FC  EQ+  E  K+ +L + ++   GF
Sbjct: 374 RFAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCMPEQLDEEFKKVIDLTLYVFSSLGF 433

Query: 421 EKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           E    ++S R     EK +GSD  W+ AE+ +      I  + +  +N  V  GE AFYG
Sbjct: 434 EDFTAQVSLRDPDNKEKYIGSDDAWEKAESAI------INAADEKGLNYVVETGEAAFYG 487

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK ++++KDA+GR WQ GTIQVD+NLP RF+  Y  S +E   PVMIHRA FGS+ERFI 
Sbjct: 488 PKLDFMVKDALGRSWQLGTIQVDYNLPERFDLTYKGSDNESHRPVMIHRAPFGSMERFIA 547

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           I++E+  GN PLWL P QAI+ +++    +Y+Q++  LL+++ +    D RNETI  KIR
Sbjct: 548 ILLEHTGGNFPLWLMPEQAIILSLSEKYEKYSQKVLTLLENNEIRALADNRNETIGKKIR 607

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRF--GSTTTQKV 632
           E  + K P ++I G++EA + +I +R+   G   T K+
Sbjct: 608 EAEVNKYPYMLIVGEQEAKDGTISVRKHSEGDLGTMKI 645


>gi|294786915|ref|ZP_06752169.1| threonine--tRNA ligase [Parascardovia denticolens F0305]
 gi|315226550|ref|ZP_07868338.1| threonine--tRNA ligase [Parascardovia denticolens DSM 10105]
 gi|294485748|gb|EFG33382.1| threonine--tRNA ligase [Parascardovia denticolens F0305]
 gi|315120682|gb|EFT83814.1| threonine--tRNA ligase [Parascardovia denticolens DSM 10105]
          Length = 687

 Score =  486 bits (1250), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 265/670 (39%), Positives = 392/670 (58%), Gaps = 43/670 (6%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IE 60
           PS I +T  +G  +      TG ++ ES      K  +AV ING   DL  P+  G  +E
Sbjct: 5   PSLIPITV-NGEHREVEDTTTGVELFES-----DKNIIAVRINGHPRDLYAPLHAGDKVE 58

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            I  +    LA++RHS  H+MA+AVQ I+P+ ++ IGP+I++GFYYDFD E+PF+ ++L 
Sbjct: 59  SIALDSEDGLAIMRHSATHVMAQAVQEIYPDAKLGIGPVIDNGFYYDFDVERPFTPEDLK 118

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIP-----------AKE 169
           +IEK+MQ II     F ++ +S E AR+  E   + YK+E++ S             ++ 
Sbjct: 119 EIEKRMQRIIKSSQSFRRRVVSEEAARQ--EEADQPYKLELICSAENAIDQGKDTGVSQG 176

Query: 170 NVTLY----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
            +++Y    R+G+  W DLC GPH+ +T  +K F KL + AGAYWRG    PML RIYGT
Sbjct: 177 QLSMYDNMDREGKVVWTDLCHGPHLPNTRYIKAF-KLERTAGAYWRGSEKNPMLQRIYGT 235

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISY 282
           AW +++++  YL  LEE+ KRDHRKL  EMDLF   ++ G G+  +H KG  +   +  Y
Sbjct: 236 AWASKEDMKAYLARLEEAAKRDHRKLGAEMDLFSFPDEIGPGLAVFHPKGAAVINAMKEY 295

Query: 283 MR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD-------DTIKDLRTF 334
            R +  K+ Y  + TP +    L++ SGH   Y+  M+     D       + I++   +
Sbjct: 296 SRLQHRKNHYSFVQTPHITKGGLYETSGHLQWYKDGMYPPMRLDEERDENGNVIREGFDY 355

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
            LKPMNCP H  +F    +SYRELP+RL EFG+VYR E SG +HGL RVRG TQDD+H++
Sbjct: 356 YLKPMNCPMHNLIFKSRQRSYRELPLRLFEFGTVYRYEKSGVVHGLTRVRGLTQDDSHIY 415

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE-KRVGSDALWDDAENIMKGVLD 453
           CT+EQM +E   + N ++ + KDFG     ++LST+ E K VGSD +W++A    K + D
Sbjct: 416 CTREQMRDELKSLLNFVLQLLKDFGLNDFYLELSTKDEHKFVGSDEIWEEA---TKTLAD 472

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS 513
             K S  + ++     G  AFYGPK     +DA+GR WQ  TIQ+DFNLP RF   Y+ +
Sbjct: 473 VAKESGLELVDDP---GGAAFYGPKISVQARDALGRTWQVSTIQLDFNLPERFQLEYIAA 529

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIAN 573
              +  PVMIHRA+FGSIERF  I++E++ G  P WL+P Q +   +  S+++Y +E+ +
Sbjct: 530 DGSRQRPVMIHRALFGSIERFFAILLEHYAGAFPAWLAPTQVLGVPVADSSLDYLKEVLD 589

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            L  + +  E D  ++    KIR  S  K+P I+I GD++  + ++  R    +    V 
Sbjct: 590 RLDENLVRTELDASDDRFGKKIRNASKSKVPFILIVGDEDREKGAVSFRFRDGSQLNGVP 649

Query: 634 LLDAIPILTK 643
              AI  +T+
Sbjct: 650 ADQAIAWITE 659


>gi|210634040|ref|ZP_03297958.1| hypothetical protein COLSTE_01876 [Collinsella stercoris DSM 13279]
 gi|210158984|gb|EEA89955.1| hypothetical protein COLSTE_01876 [Collinsella stercoris DSM 13279]
          Length = 587

 Score =  486 bits (1250), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 246/571 (43%), Positives = 362/571 (63%), Gaps = 20/571 (3%)

Query: 56  EGSI-EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQP 113
           +GS+ E+ + E+  +L +IRHS AHIMA+A++ ++PE   A GP  ++GFYYD D  +  
Sbjct: 7   DGSVAEVESAEE--ALHIIRHSAAHIMAQAIKRLYPEADFAYGPATDNGFYYDVDLGDAT 64

Query: 114 FSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTL 173
            S D+L  IE +M++I   +  F    L   +A  L E + E YKVE +  +P    +T 
Sbjct: 65  LSEDDLPAIEAEMKKIAKENLKFSVFELPRAEAIALMEERGEKYKVEHIGDLPEDARITF 124

Query: 174 YRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQ 233
           ++QG++ D+C GPH+  T  +K F KL  V+GAYW+ D+N  ML+R+ GTA+ T+ EL  
Sbjct: 125 FQQGDYIDMCVGPHLTYTKALKAF-KLTGVSGAYWKADANNKMLTRVNGTAFATKDELDA 183

Query: 234 YLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYE 292
           +L  LEE++KRDHR++ REMDLF + ++  G  F+   G  +  TL+ Y R    K  Y 
Sbjct: 184 HLTMLEEAKKRDHRRIGREMDLFMMRDEAPGFPFFLPNGMILKNTLLDYWREIHHKAGYV 243

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           EI+TPQ+++  LW+ SGHWD Y+ NM++      T+ D   + +KPMNCPG V V+    
Sbjct: 244 EISTPQIMNSQLWKTSGHWDHYKDNMYS------TMIDGEEYCIKPMNCPGGVLVYASKP 297

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
            SYRELP+R  E G V+R+E  G+LHGL RVR F QDDAH+F T EQ+ +E + + NLI 
Sbjct: 298 HSYRELPIRAGEIGLVHRHELKGALHGLFRVRCFNQDDAHLFVTPEQLTDEIVGVVNLIT 357

Query: 413 SIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
           S+Y  FGF    ++LSTRPE  +GSD  W+ AE  +K  L+ +       +   V  G+G
Sbjct: 358 SVYDKFGF-TYHLELSTRPEDSMGSDEDWERAEAGLKTALERLG------MEYVVNEGDG 410

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           AFYGPK ++ L+D++GR WQCGT+Q+DF +P  F+  YV++   K  P+M+HR  FGSIE
Sbjct: 411 AFYGPKIDFHLEDSLGRTWQCGTVQLDFQMPQNFDLEYVDADGTKKRPIMLHRVCFGSIE 470

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
           RFIGI+IE+F G  P+WL+P+Q  V  ++  + +YA E+   L++  + +  D R+E I 
Sbjct: 471 RFIGILIEHFAGKFPVWLAPMQVKVLPVSEKSRDYAHEVTAKLEAAGIRVVCDDRDEKIG 530

Query: 593 YKIRE-HSIKKIPIIIICGDKEASERSIGIR 622
           YKIRE     ++P ++I G+KE    +I +R
Sbjct: 531 YKIREARGTDRVPYMLILGEKEVEAGNISVR 561


>gi|219685509|ref|ZP_03540326.1| threonine--tRNA ligase [Borrelia garinii Far04]
 gi|219672908|gb|EED29930.1| threonine--tRNA ligase [Borrelia garinii Far04]
          Length = 581

 Score =  486 bits (1250), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 244/571 (42%), Positives = 359/571 (62%), Gaps = 16/571 (2%)

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           RHS AH+MAEAV  ++P  ++AIGP I+DGFYYDF+ ++  + D L  IE +M+EI+   
Sbjct: 15  RHSIAHVMAEAVCDLFPNTKIAIGPPIKDGFYYDFEFKKQITEDSLLDIENRMREILKTG 74

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQ 193
           S F K+ +S E+A E+F  K E YK++++++   +  +++Y+   + DLCRGPHV +  +
Sbjct: 75  SSFEKEIISLEQALEIF--KDEPYKIDLIKNFDLQNEISIYKSHNFIDLCRGPHVDNMNK 132

Query: 194 VK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLARE 252
           +  K FKL  +AGAYWRG+    ML+RIYGT WN ++EL  YL   EE +KR+HRKL +E
Sbjct: 133 IDPKAFKLTGIAGAYWRGNEKNTMLTRIYGTLWNNEKELRSYLNLREEIKKRNHRKLGKE 192

Query: 253 MDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGH 310
           +DLF I E+ G G+IF+H  G KI   +  + R +  K+ Y+ + TP V    LWQ SGH
Sbjct: 193 LDLFSIHEEIGPGLIFFHPNGAKIRALIEDFWREEHSKNGYDILFTPHVGKSWLWQTSGH 252

Query: 311 WDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYR 370
            D Y+ +MF     D +      + LKPMNCP H+A++N G  SYR+LP R AE G+VYR
Sbjct: 253 LDFYKDSMFEKIEMDKS-----DYYLKPMNCPFHIAIYNTGKHSYRDLPFRWAELGTVYR 307

Query: 371 NEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR 430
            E  G+LHG+MR RGFTQDDAH+ CT  Q+ +E  ++    I ++  FGF  +   LST+
Sbjct: 308 YEKIGALHGMMRARGFTQDDAHIICTHSQVVDEIKEVLRFAIYMWSKFGFSSLKAYLSTK 367

Query: 431 PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRD 490
           P+K VG+D  W+ +  +++  L      S   +   +  G GAFYGPK +  + D++ R+
Sbjct: 368 PDKSVGNDYDWEMSLKVLEEAL------SNFEVPYEIDKGGGAFYGPKIDLKIVDSLERE 421

Query: 491 WQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL 550
           WQ  TIQ DFNLP RFN  Y     ++  P MIHRA+ GSIERF GI++E++ G  PLWL
Sbjct: 422 WQMSTIQFDFNLPERFNMTYTAEDGKEKRPFMIHRALLGSIERFFGILVEHYGGAFPLWL 481

Query: 551 SPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           SP+QA++  + ++  +Y  ++ N  K+  + I+ D  +  +N KIRE+  KKIP + I G
Sbjct: 482 SPVQAVIIPVNNTVEDYTIKVLNKFKNAGIRIKLDNSSSRMNAKIREYQAKKIPYMFIIG 541

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           ++EA E  I IR   +     + L +A+ ++
Sbjct: 542 EREAIEEKISIRTRTNEQISGIELDEALKLI 572


>gi|268678723|ref|YP_003303154.1| threonyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
 gi|268616754|gb|ACZ11119.1| threonyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
          Length = 605

 Score =  486 bits (1250), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 247/582 (42%), Positives = 367/582 (63%), Gaps = 24/582 (4%)

Query: 69  SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQE 128
           +L VIRHSCAH+MA+A+++++ + Q  +GP+IEDGFYYDF   +     +L +IEKKM E
Sbjct: 39  ALEVIRHSCAHLMAQAIKALYKDAQFFVGPVIEDGFYYDFRVNEKIGDADLKEIEKKMAE 98

Query: 129 IIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           +     P  K Y +  KA  L     +  K E++  IP  E V++Y+QG++ DLCRGPHV
Sbjct: 99  LANAKLPIEKIYTT--KAEALKHFAHDDLKQEVMLRIPDGE-VSIYKQGDFEDLCRGPHV 155

Query: 189 RSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRK 248
            +T  ++ FFKL+KVAGAY  GD  R ML+RIYG A+  ++ L  Y+  +EE++KRDHRK
Sbjct: 156 PNTKYLR-FFKLIKVAGAYLGGDEKREMLTRIYGIAFADKESLKDYVTMIEEAKKRDHRK 214

Query: 249 LAREMDLFHIAED-GSGVIFWHRKGWKI---FQTLISYMRRKIKDDYEEINTPQVLDQHL 304
           +  E+ LF   ++ G+G+  W  +G K+    + L+    RK    Y+ +  P++L    
Sbjct: 215 IGNELKLFTFDDEVGAGLPIWLPQGGKLRAKLEKLLFTAHRK--RGYQPVRGPEILKSDA 272

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W+ SGH+ +Y  NM+       T+ D   + +KPMNC GH+ VF   ++SYR+LP++  E
Sbjct: 273 WKISGHYQNYGENMYF------TVIDEAEYGIKPMNCLGHIKVFQSEVRSYRDLPLKFFE 326

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           +G V+R+E SG LHGL RVR FTQDDAH+FCT +Q+    L+I + + SI K FGF   M
Sbjct: 327 YGVVHRHEKSGVLHGLFRVREFTQDDAHIFCTPDQIKENVLEILSFVDSIMKTFGFHYEM 386

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
            ++STRPEK +G +  W+ A   +K  LD      ++ I  G+  G GAFYGPK +  + 
Sbjct: 387 -EISTRPEKSIGDERYWEAATQGLKNALD------ENGITYGIDEGGGAFYGPKIDIKIT 439

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           DA+ R WQCGTIQVDFNLP RF+  YV++++E   PVM+HRA+ GS ERFIGI+IE+  G
Sbjct: 440 DALKRKWQCGTIQVDFNLPERFDISYVDANNEHARPVMLHRAILGSFERFIGILIEHTSG 499

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P +L+P Q ++  I+ + +EYA+ +AN L +  + +E   +NE++N +IR     ++P
Sbjct: 500 EFPFFLAPTQVVIVPISDAHLEYAKSVANALMAEEIDVEVSSKNESLNKRIRNAETMRVP 559

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           +I++ GD E   +S+ +R     T   +S ++ I  L KE L
Sbjct: 560 MILVIGDAEVENQSVAVRDRRERTQYNLSKVELIKTL-KEKL 600


>gi|295839903|ref|ZP_06826836.1| threonine-tRNA ligase [Streptomyces sp. SPB74]
 gi|197696732|gb|EDY43665.1| threonine-tRNA ligase [Streptomyces sp. SPB74]
          Length = 658

 Score =  486 bits (1250), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 266/652 (40%), Positives = 393/652 (60%), Gaps = 47/652 (7%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEI 61
           SD+++     S ++  V  TG+  A+       +  VA  ++G++ DL+  + +G  +E 
Sbjct: 2   SDVRVIIQRDSERDERVVTTGTTAADLFPGE--RTVVAARVDGELRDLAYVLGDGERVEP 59

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +       L ++RHS AH+MA+AVQ I+PE ++ IGP ++DGFYYDFD E+PF+ ++L  
Sbjct: 60  VQISSEDGLNILRHSTAHVMAQAVQEIFPEAKLGIGPPVKDGFYYDFDVEKPFTPEDLKA 119

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEI--LESIPAKEN--------- 170
           +EKKMQEI  R   F ++ +S ++ARE  E   E YK+E+  L+   A ++         
Sbjct: 120 VEKKMQEIQKRGQRFARRVVSEDEARE--ELAAEPYKLELIGLKGGSASDDGSDVEVGGN 177

Query: 171 -VTLY-----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYG 222
            +T+Y     + GE  W DLCRGPH+ +T ++   FKLM+ A AYWRG    PML RIYG
Sbjct: 178 ELTIYDNLDAKTGELCWKDLCRGPHLPTT-RLIPAFKLMRNAAAYWRGSEKNPMLQRIYG 236

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLIS 281
           TAW ++ EL  +L FL E+EKRDHRKL  E+DLF   E+ G G+  +H KG  I + +  
Sbjct: 237 TAWPSKDELKAHLDFLAEAEKRDHRKLGNELDLFSFPEEVGPGLAVFHPKGGIIRRAMED 296

Query: 282 YMRRKIKDD-YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
           Y RR+ +++ YE + +P      L+Q+SGH D Y   M+     D+ +     + LKPMN
Sbjct: 297 YSRRRHEEEGYEFVYSPHTTKGALFQKSGHLDWYADGMYPPMQLDEGVD----YYLKPMN 352

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
           CP H  +F+   +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDDAH++CTKEQM
Sbjct: 353 CPMHNLIFDARGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRSRGFTQDDAHIYCTKEQM 412

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR-VGSDALWDDAENIMKGVLDTIKNSS 459
             E  K    ++++ +D+G +   ++LST+ EK+ VGSD +W++A + +  V +      
Sbjct: 413 AEELDKTLTFVLNLLRDYGLDDFYLELSTKDEKKFVGSDEVWEEATSTLAEVAE------ 466

Query: 460 QDRINTGVLL----GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS 515
                 G+ L    G  AFYGPK     +DAIGR WQ  TIQ+DFNLP RF+  Y  +  
Sbjct: 467 ----KQGLPLVPDPGGAAFYGPKISVQARDAIGRTWQMSTIQLDFNLPERFDLSYTAADG 522

Query: 516 EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLL 575
            +  PVMIHRA+FGSIERF  +++E++ G +P WL+P+QA+   +  + V Y +E A   
Sbjct: 523 SRQRPVMIHRALFGSIERFFAVLLEHYAGAMPPWLAPVQAVGIPVGDAHVPYLKEFAAEA 582

Query: 576 KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR-RFGS 626
           +   L ++ D  ++ +  KIR H  +K P +II GD + +  ++  R R GS
Sbjct: 583 RKQGLRVDVDASSDRMQKKIRNHQKQKTPFMIIVGDDDMNAGTVSFRHRDGS 634


>gi|124486137|ref|YP_001030753.1| hypothetical protein Mlab_1319 [Methanocorpusculum labreanum Z]
 gi|124363678|gb|ABN07486.1| threonyl-tRNA synthetase [Methanocorpusculum labreanum Z]
          Length = 586

 Score =  486 bits (1250), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 256/567 (45%), Positives = 364/567 (64%), Gaps = 24/567 (4%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQIEKKMQE 128
           L VIRH+ AH++A+AV+ ++P      GP  E GFYYD D  +   S  +LA IE++M+E
Sbjct: 19  LHVIRHTAAHVLAQAVKRLYPHAAFGYGPATEKGFYYDIDLGDTKLSDTDLAAIEQEMRE 78

Query: 129 IIARD---SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           I+  +    PF+   L   +A +L E +KE YKVE +  +   E ++ ++QGE+ D+C G
Sbjct: 79  IVKANLQIKPFI---LPRAEALKLMEERKEPYKVEHIADLDENEPLSFFQQGEYIDMCTG 135

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PH+  T  +K F KL  ++GAYW+ DS   ML+RI GTA+++ +EL  +L   EE+E+RD
Sbjct: 136 PHLTYTKTLKAF-KLTGLSGAYWKNDSKNKMLTRINGTAFSSGKELEDFLKLQEEAERRD 194

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHL 304
           HRK+ +EM LF  +++G G  F+   G  +  +L+ Y R    ++ Y+EI+TP ++++ L
Sbjct: 195 HRKIGKEMKLFMFSDEGPGFPFFLPNGMIVRNSLLDYWRELHAENGYQEISTPLIMNRCL 254

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W+ SGHWD Y+ NM+A  C DD       + +KPMNCPG V V+ +   SYRELP+RLAE
Sbjct: 255 WETSGHWDHYKDNMYAT-CIDD-----EDYCIKPMNCPGGVMVYANEPHSYRELPMRLAE 308

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
            G V+R+E  G+LHGL RVR FTQDDAH+F  K Q+ +E   +  LI  +Y  FGFE  +
Sbjct: 309 LGLVHRHELKGTLHGLFRVRCFTQDDAHIFMRKNQISDEIAGVVRLINEVYTKFGFEYFL 368

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
            +LSTRPE  +GSD  W+ A N +K  LD +K      IN G    +GAFYGPK ++ LK
Sbjct: 369 -ELSTRPENSMGSDEDWEAATNGLKDALDLLKLPYT--INEG----DGAFYGPKIDFHLK 421

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D +GR WQCGTIQ+DF +P  F+  YV+ + E+  P+MIHR  FGSIERFIGI+ E+F G
Sbjct: 422 DCLGRTWQCGTIQLDFQMPINFDLAYVDENDERQRPIMIHRVCFGSIERFIGILTEHFAG 481

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE-HSIKKI 603
             P+WL+P+QA V  +T  +  YA+EI  +LK   +  E D RNE I Y IR+ H  +++
Sbjct: 482 RFPVWLAPMQAKVLLVTKKSESYAEEIYAMLKDAKIRCELDNRNEKIGYMIRQAHYTERV 541

Query: 604 PIIIICGDKEASERSIGIR-RFGSTTT 629
           P +II G+KE  + ++ IR R G T T
Sbjct: 542 PYMIIIGEKELEDHTVSIRTRDGKTVT 568


>gi|34540737|ref|NP_905216.1| threonyl-tRNA synthetase [Porphyromonas gingivalis W83]
 gi|73919814|sp|Q7MVQ5|SYT_PORGI RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|34397051|gb|AAQ66115.1| threonyl-tRNA synthetase [Porphyromonas gingivalis W83]
          Length = 653

 Score =  485 bits (1249), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 257/649 (39%), Positives = 397/649 (61%), Gaps = 20/649 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+TFPDG+ + +    TG D+A SIS  L +  +A  +NG+V DL   + E   +++  
Sbjct: 2   IKITFPDGNFREYEAGITGWDIAGSISPRLQQDVLAAGVNGQVWDLHRQINEDAEVKLFK 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFS--SDELAQ 121
            +D        HS AH+MAEA++ ++P ++  IGP IE+GFYYD D  +  S    +L  
Sbjct: 62  WDDAEGKHAFWHSSAHLMAEALEELYPGIKFGIGPAIENGFYYDVDPGEGISIKDADLPA 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK+MQ++ AR    +++ ++   A  +F  K + YKVE++  + A   +T Y QG + D
Sbjct: 122 IEKRMQDLAARKETIIRRDIAKADALRMFGDKDDQYKVELISEL-ADGTITTYTQGGFTD 180

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ +TG +K   KL+ VAGAYWRGD  R  L+RIYG ++  ++ L +YL  LEE+
Sbjct: 181 LCRGPHLPNTGYIKAI-KLLSVAGAYWRGDEKRKQLTRIYGISFPKKKMLDEYLELLEEA 239

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQV 299
           +KRDHRK+ +E++LF  +++ G+G+  W  +G ++   L  ++++  K   Y+++ TP +
Sbjct: 240 KKRDHRKIGKELELFAFSQNVGAGLPLWLPRGTQLRLRLEDFLKQIQKHFGYQQVITPHI 299

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +++L+  SGH+  Y  + F      +T ++   F LKPMNCP H  +F     SYR+LP
Sbjct: 300 GNKNLYITSGHYAKYGQDSFR---PINTPQEGEEFMLKPMNCPHHCEIFKITPHSYRDLP 356

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +RLAEFG+VYR E SG LHGL RVRGFTQDDAH+FC  +Q+  E  K+ ++I  I+K   
Sbjct: 357 IRLAEFGTVYRYEQSGELHGLTRVRGFTQDDAHLFCRPDQLKEEFCKVMDIIFIIFKALD 416

Query: 420 FEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           F+    ++S R     EK +GS+  W+ AE  +      I+   +  +   +  GE AFY
Sbjct: 417 FKNFEAQISLRDKVNREKYIGSEENWERAERAI------IEACEEKGLPAVIEYGEAAFY 470

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDA+GR WQ GTIQVD+NLP RF+  Y    ++K  PVMIHRA FGS+ERF+
Sbjct: 471 GPKLDFMVKDALGRRWQLGTIQVDYNLPERFDLEYTGEDNKKHRPVMIHRAPFGSMERFV 530

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE+  G  PLWL+P Q +V  ++    EYA  +A  L    + ++ D RNE +  KI
Sbjct: 531 AVLIEHTAGKFPLWLTPDQVVVLPVSERFNEYAHRVAKELNQRDIRVQVDDRNEKVGRKI 590

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R++ +K+IP ++I G+ E+ E  + +R+ G      + +     ++ KE
Sbjct: 591 RDNELKRIPYMLIVGENESREEEVSVRKQGEGDMGIMKITTFAELIEKE 639


>gi|254411303|ref|ZP_05025080.1| threonyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420]
 gi|196181804|gb|EDX76791.1| threonyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420]
          Length = 609

 Score =  485 bits (1249), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 246/602 (40%), Positives = 372/602 (61%), Gaps = 23/602 (3%)

Query: 47  VCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYY 106
           + ++  P +   I +    +  SL  IRH+ +H+MA AVQ ++P  QV IGP IE+GFYY
Sbjct: 6   MSNVEAPQKPEKIHLPRTSESESLKKIRHTASHVMAMAVQKLFPGTQVTIGPWIENGFYY 65

Query: 107 DFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIP 166
           DF K +PF+  +L  I+K+M +I+ R  P +++ +S E+A    +   E YK+EIL+ + 
Sbjct: 66  DFAKPEPFTEQDLKAIKKEMVKILKRKLPLIREEVSREEAERRIKELGEPYKLEILQDL- 124

Query: 167 AKENVTLYRQGE-WFDLCRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTA 224
            ++ +TLY  GE W+DLC GPHV +T  +  K   L  VAGAYWRGD+++  L RIYGTA
Sbjct: 125 -EDPITLYHLGEDWWDLCAGPHVETTADIHPKAIDLESVAGAYWRGDASKAQLQRIYGTA 183

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM 283
           W T ++LT+Y    +E+ KRDHRKL +++ LF +++  G G+  W  KG  +  TL  ++
Sbjct: 184 WETPEQLTEYKRRKQEALKRDHRKLGKDLGLFILSDPVGPGLPLWTPKGTILRSTLEDFL 243

Query: 284 RR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
           ++ +IK  Y+ + TP +    L++ SGHW  Y+ ++F +    +       F LK MNCP
Sbjct: 244 KQEQIKRGYQPVVTPHIGRVELFKTSGHWQKYKEDLFPMMGESEA----EGFVLKAMNCP 299

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN 402
            HV ++ H L+SYR+LP+RLAEFG+VYR E SG L GL RVRGFTQDDAH+F T EQ+ +
Sbjct: 300 FHVQIYKHELRSYRDLPMRLAEFGTVYRYEQSGELGGLTRVRGFTQDDAHLFVTPEQLDD 359

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTR---PEKRVGSDALWDDAENIMKGVLDTIKNSS 459
           E L++ +L +S++   G +    +LS R    +K +GSD  W+ +EN ++  ++T+    
Sbjct: 360 EFLRVVDLTLSVFNTLGLQDFKARLSFRDPSQDKYIGSDEAWNKSENAIRRAVETLGMGH 419

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
            + I      GE AFYGPK +++  DA+ R+WQ GT+QVD+NLP RFN  YV     +  
Sbjct: 420 FEGI------GEAAFYGPKLDFMFHDALDREWQLGTVQVDYNLPERFNLEYVAEDGTRQR 473

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH 579
           PVMIHRA FGS+ER IGI+IE + G+ P WL+P+QA +  ++   + +A+E+A  ++   
Sbjct: 474 PVMIHRAPFGSLERLIGILIEEYAGDFPFWLAPVQARLLPVSDEQLTFAKEVAQKMRLVG 533

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR-RFGSTTTQKVSLLDAI 638
           + +E D   + +   IR     KIP++ + G KE    S+ +R R     +Q    L AI
Sbjct: 534 VRVEVDTSGDRLPKMIRNGEKAKIPVMAVVGAKEVESNSLSVRIREAGKQSQD---LGAI 590

Query: 639 PI 640
           P+
Sbjct: 591 PV 592


>gi|303233025|ref|ZP_07319704.1| threonine--tRNA ligase [Atopobium vaginae PB189-T1-4]
 gi|302480896|gb|EFL43977.1| threonine--tRNA ligase [Atopobium vaginae PB189-T1-4]
          Length = 589

 Score =  485 bits (1249), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 247/578 (42%), Positives = 363/578 (62%), Gaps = 21/578 (3%)

Query: 72  VIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD--FDKEQPFSSDELAQIEKKMQEI 129
            IRHSCAH++A+AV+ ++P    A GP  E+GFYYD  F +    S D+L  IE +M++I
Sbjct: 21  TIRHSCAHLLAQAVKRLYPNTHFAYGPATENGFYYDMSFGEGVKISEDDLPAIEAEMKKI 80

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
              +       L   +A      + E +KVE +   P    +T Y+QGE+ D+C GPHV 
Sbjct: 81  AKENLKVETFELPRAEAIAFLNERGERFKVEHIADFPESTRLTFYKQGEYVDMCTGPHVC 140

Query: 190 STGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKL 249
            T +++ F KL  ++GAYW+ +S+  ML+RI G A++T++EL +Y   + E+EKRDHRK+
Sbjct: 141 YTSKLRAF-KLTGISGAYWKANSDNEMLTRISGVAFDTKEELAEYERLIAEAEKRDHRKI 199

Query: 250 AREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDY--EEINTPQVLDQHLWQQ 307
            +EMDLF + E G G  FW   G +I   L+ Y + +++D Y  E+I TP +L + LW+ 
Sbjct: 200 GKEMDLFMLNEAGPGFPFWLPNGMRIRNELMKYWQ-EMQDQYGYEQIQTPIILSRKLWET 258

Query: 308 SGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGS 367
           SGHWD Y+ NM+       T+ D   FA+KPMNCPG   V+    +SYR+LP++LAE G 
Sbjct: 259 SGHWDHYKENMYT------TVIDDEDFAIKPMNCPGACLVYMSKPRSYRDLPLKLAEAGL 312

Query: 368 VYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKL 427
            +R+E  G+LHGL RVR FTQDDAH+F   +Q+ +E  ++  LI + YK FGF    V+L
Sbjct: 313 DHRHELKGTLHGLFRVREFTQDDAHLFIRPDQICDEVREVTELISAYYKQFGF-PYKVEL 371

Query: 428 STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAI 487
           STRPE  +GSD  W  AE  ++  L+T+       ++  +  G+GAFYGPK ++ LKD +
Sbjct: 372 STRPENSMGSDEDWATAEAGLRDALETMG------LDYTINEGDGAFYGPKIDFHLKDCL 425

Query: 488 GRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           GR WQCGTIQ+DF  P  FN  YV+S  +K  P+MIHRA FGS ERFIG++IE ++G  P
Sbjct: 426 GRTWQCGTIQLDFQFPHNFNLEYVDSDGQKKRPIMIHRAGFGSFERFIGMLIEQYEGKFP 485

Query: 548 LWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE-HSIKKIPII 606
           +WL+P+Q  V  ++    +YA+E+   L    + ++ D R+E I YKIRE  SI ++P +
Sbjct: 486 VWLAPLQVKVLPVSEKTRDYARELTQKLLKLKIRVKLDDRDEKIGYKIREARSIDRVPYM 545

Query: 607 IICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +I G++EA   +I +R   +TTTQ  +  D + +L ++
Sbjct: 546 LIVGEQEAQAGNISVRDRSNTTTQ-YAFDDFVALLQRQ 582


>gi|288802831|ref|ZP_06408268.1| threonine--tRNA ligase [Prevotella melaninogenica D18]
 gi|288334648|gb|EFC73086.1| threonine--tRNA ligase [Prevotella melaninogenica D18]
          Length = 649

 Score =  485 bits (1249), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 249/639 (38%), Positives = 398/639 (62%), Gaps = 19/639 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           +K+TFPDGS++ +    TG  +AESIS +LA+  V+  +NG+  +L+ P+ E  SI +  
Sbjct: 2   VKITFPDGSVREYEQGVTGFQIAESISPALARDVVSCGVNGETTELNRPINEDASIALYK 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF--DKEQPFSSDELAQ 121
            +D        H+ AH++AEA+Q ++P +Q   GP +E+GF+YD    + Q  S ++  +
Sbjct: 62  FDDEEGKHTFWHTSAHLLAEALQELYPGIQFGFGPAVENGFFYDVMPAEGQTISENDFPK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE+KM+E+  ++ P +++ +S   A + F +  + YKVE +        ++ Y QG + D
Sbjct: 122 IEEKMRELAKKNEPVVRRNVSKADAVKEFTADGQEYKVEHIVEDLEDGTISTYSQGNFTD 181

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ STG +K   K+  VAGA+WRGD+ R  ++RIYG  +  ++ L +YL  LEE+
Sbjct: 182 LCRGPHLVSTGAIKAV-KITSVAGAFWRGDAKREQMTRIYGITFPKKKMLDEYLEMLEEA 240

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQV 299
           +KRDHRK+ +EM+LF  ++  G G+  W  KG ++   L   +RR ++  +Y+E+ TP +
Sbjct: 241 KKRDHRKIGKEMELFMFSDRVGKGLPIWLPKGTQLRLRLQELLRRLLRPYNYQEVITPGI 300

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             ++L+  SGH+  Y  + F       T ++   + LKPMNCP H  ++ +  +SY++LP
Sbjct: 301 GGKNLYVTSGHYAHYGKDAFQ---PIHTPEEDEEYMLKPMNCPHHCEIYAYKPRSYKDLP 357

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AEFG+V+R E SG LHGL RVR FTQDDAH+F   +Q+  E     ++I+ ++K FG
Sbjct: 358 LRIAEFGTVFRYEKSGELHGLTRVRTFTQDDAHIFVRPDQVKAEFENNIDIILKVFKTFG 417

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           F+    ++S R     EK +GSD +W+++E  +K      +  ++  +N  V LGE AFY
Sbjct: 418 FDNYEAQISLRDPEDKEKYIGSDEVWEESEAAIK------EACAEKGLNARVELGEAAFY 471

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDAIGR WQ GTIQVD+NLP+RF   Y    + K  PVM+HRA FGS+ERF 
Sbjct: 472 GPKLDFMVKDAIGRRWQLGTIQVDYNLPNRFKLEYTAEDNSKKTPVMVHRAPFGSLERFT 531

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE+  G+ PLWL+P Q  +  I+    +YAQ++     +H +    D RNE I  KI
Sbjct: 532 AVLIEHTAGHFPLWLTPDQVAILPISEKYNDYAQKVKAYFDAHDVRSIMDDRNEKIGRKI 591

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           R++ +K++P ++I G+KEA+E  + +R+ G      +++
Sbjct: 592 RDNELKRVPYMVIVGEKEAAEGLVSMRQQGGGEQATMTM 630


>gi|302669952|ref|YP_003829912.1| threonyl-tRNA synthetase ThrS [Butyrivibrio proteoclasticus B316]
 gi|302394425|gb|ADL33330.1| threonyl-tRNA synthetase ThrS [Butyrivibrio proteoclasticus B316]
          Length = 602

 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 242/585 (41%), Positives = 369/585 (63%), Gaps = 18/585 (3%)

Query: 55  REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPF 114
           R+G +  ++ +D        H+ AH++A+AV+ ++P+ + AIGP IE+GFYYDFD    F
Sbjct: 22  RDGQVMEVSFDDNDGKKAFWHTSAHVLAQAVKRLYPQAKCAIGPAIENGFYYDFDFGFSF 81

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQY-LSHEKARELFESKKEAYKVEILESIPAKENVTL 173
           + D L  IE +M+ II ++S  L+ Y +S + A    E   E +K+E++  +P  E ++ 
Sbjct: 82  NEDNLGAIEDEMRRII-KESLSLQVYEMSKKDAISYMEKADEPFKLEMIRELPEGEVISF 140

Query: 174 YRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQ 233
           Y+QG++ + C GPH+ +   +K   KL+ VAGAYWRGD +  ML+RIYG ++     +  
Sbjct: 141 YKQGDYAEFCAGPHIVNVSHIKAV-KLLSVAGAYWRGDEHNKMLTRIYGISFPKASLMDD 199

Query: 234 YLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYE 292
           +L+ LEE++ RDHR L +E++LF + ++G G+ F+  KG  +   LI Y R+  +++ Y+
Sbjct: 200 HLHQLEEAKARDHRVLGKELELFALMDEGPGLPFYFPKGLVLKNLLIDYWRKIHVREGYQ 259

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           EI+TP +L + LW++SGHWD YR NM+ V   DD       +A+KPMNCPG + V+    
Sbjct: 260 EISTPIMLTKALWEKSGHWDHYRDNMY-VTSVDDM-----DYAIKPMNCPGGMLVYKSKP 313

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
            SYRE P+R  E G V+R E SG+LHGLMR R FTQDDAH+F  ++Q+ +E   +  LI 
Sbjct: 314 HSYREFPIRCGELGIVHRAEKSGTLHGLMRARCFTQDDAHIFMREDQVLSEIQGVMRLID 373

Query: 413 SIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
            +Y  FGF    ++LSTRPE  +GSD  W  A   +K  ++ +      +IN G    +G
Sbjct: 374 EVYSKFGF-PYEIELSTRPENSIGSDEDWQLATESLKAAVEGMGKPY--KINEG----DG 426

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           AFYGPK ++ +KD+IGR WQCGTIQ+DF LP RF+  Y+    ++  P+M+HR VFGSI+
Sbjct: 427 AFYGPKLDFHVKDSIGRTWQCGTIQLDFQLPQRFDLEYIGEDGKEHRPIMLHRVVFGSID 486

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
           RF+GI+IE++ G  P+WLSP+Q  V  ++   ++YA+EI   L    +  E D R+E + 
Sbjct: 487 RFMGILIEHYAGKFPVWLSPVQVKVLPVSDKYLDYAKEIMAKLYEEGIRAELDDRDEKLG 546

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIR-RFGSTTTQKVSLLD 636
           +KIRE  ++K+P +II G+KE   R + +R R      Q++  +D
Sbjct: 547 FKIREARMQKVPYMIIVGEKEKDNRLVSVRQRDAEQDKQEIGEMD 591


>gi|87309081|ref|ZP_01091218.1| threonyl-tRNA synthetase [Blastopirellula marina DSM 3645]
 gi|87288072|gb|EAQ79969.1| threonyl-tRNA synthetase [Blastopirellula marina DSM 3645]
          Length = 668

 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 257/652 (39%), Positives = 391/652 (59%), Gaps = 24/652 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI-- 61
           +++  PDG++K++ +  T  DVA  I   LAK  +A  I+G+      P+  EGS+ +  
Sbjct: 2   LEVHLPDGNVKSYDIAITPMDVAADIGAGLAKATLAAQIDGQTVGFDAPLPTEGSVNLRL 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +T +D  +L V+RHSCAHIMA AV  ++  VQ+A GP IE GFYYDFD E   ++++   
Sbjct: 62  LTNKDKEALGVMRHSCAHIMARAVMRLFDGVQLAFGPTIEGGFYYDFDLEHKLTAEDFPA 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES-IPAKENVTLYRQGEWF 180
           IE +M++II  + PF +   S E A  + +   + YK+E +E+ +   E ++ YRQGE+ 
Sbjct: 122 IEAEMKKIIKENEPFERIEESREGALAVVKDIDQHYKIEHIETGLSGHETLSFYRQGEFI 181

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV     +  + KL+ VAGAYW+G S+   L R+Y TA+  + +L  +L  LEE
Sbjct: 182 DLCRGPHVPRPKSIGAY-KLLSVAGAYWKGSSDNKQLQRVYATAFFNKDDLAAHLEKLEE 240

Query: 241 SEKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           +++RDHR L ++++LF I    G G+I W  KG  + Q L  ++  ++K  +YE + TP 
Sbjct: 241 AKRRDHRTLGKQLELFAINPLVGQGLILWLPKGAVVRQQLTDFVSEQLKKHEYESVFTPN 300

Query: 299 VLDQHLWQQSGHWDSYRANMFA-VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           +    L++ SGH+  Y+ + F  +  +DD       + LKPMNCP H+ ++ +  +SYRE
Sbjct: 301 IGKVDLYKTSGHYPYYKDSQFPPIHVSDD-----EEYLLKPMNCPHHIMIYKNRPRSYRE 355

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LPVRL+EFG+VYR E SG L+G+ RVRGF QDDAH+FC +EQ+  E  K   +   +   
Sbjct: 356 LPVRLSEFGTVYRYEQSGELNGMTRVRGFCQDDAHIFCMEEQVEEEFRKCIEMTQYVLNS 415

Query: 418 FGFEKIMVKLSTR-PE--KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            G     V+L  R P+  K VG+  +WD AE   + ++   KN   D +      GE AF
Sbjct: 416 LGLTDYRVRLGFRDPDNGKYVGNSKVWDRAE---QSLVSVCKNMGIDAVAEA---GEAAF 469

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPS--RFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           YGPK ++++ D +GR+WQ GT+Q+D+NLPS  RF   YV + ++   PVMIHRA FGS+E
Sbjct: 470 YGPKADFVVNDCLGREWQLGTVQLDYNLPSTERFALEYVGADNQMHRPVMIHRAPFGSLE 529

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
           RF+G++IE+F G  PLWL+P Q  V  ++    EYA+++   LK     ++ D+R E I 
Sbjct: 530 RFMGVLIEHFAGAFPLWLAPEQVRVLVVSQKFEEYARKVEAELKQAGFRVKGDYRPEKIG 589

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            KIR+  ++ IP + + G +E    S+ +R         + + +AI  L +E
Sbjct: 590 SKIRDAQLELIPYMFVIGGREMETESVAVRDRIDGDLGSMKVAEAIDKLKQE 641


>gi|270308068|ref|YP_003330126.1| threonyl-tRNA synthetase (thrS) [Dehalococcoides sp. VS]
 gi|270153960|gb|ACZ61798.1| threonyl-tRNA synthetase (thrS) [Dehalococcoides sp. VS]
          Length = 582

 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 250/560 (44%), Positives = 353/560 (63%), Gaps = 18/560 (3%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           L ++RHS AHIMAEAV S++PE ++ IGP I+ GFYYDFD  +  + ++L +IE +M ++
Sbjct: 14  LEIMRHSAAHIMAEAVLSMFPEAKLGIGPAIDTGFYYDFDLPRTLTPEDLPEIETRMNQL 73

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
           +  + PF ++ +S ++AR+LF    + YK+E+L  IP  E V++YRQG + DLCRGPHV 
Sbjct: 74  VKANLPFRREEMSKDEARKLFAD--QPYKLELLNDIP-DETVSIYRQGNFCDLCRGPHVN 130

Query: 190 STGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKL 249
            T +VK F KL+ +AGAYWRGD  RPML RIYG A+  +  L  YL  +EE+ KRDHRKL
Sbjct: 131 YTSKVKAF-KLLSIAGAYWRGDEKRPMLQRIYGAAFLDKASLADYLNMIEEAAKRDHRKL 189

Query: 250 AREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQ 307
            +E++LF + ++ G G++ W   G  I   +  + +++ +K  Y  + TP +    LW+ 
Sbjct: 190 GKELELFSLHQEIGGGLVNWLPNGATIRHLIEEFWKKEHLKRGYNLVYTPHIAKVDLWKT 249

Query: 308 SGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGS 367
           SGHW  YR NM++    D        + LKPMNC  H+ +F +  +SY+ELP+R+AE G+
Sbjct: 250 SGHWGFYRENMYSPMDIDG-----EEYVLKPMNCVYHILMFKNRTRSYKELPIRMAELGT 304

Query: 368 VYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKL 427
           VYR E SG LHGL RVRGFTQDDAH+FC  EQ+  E +K+ +L   +   FGF K  V L
Sbjct: 305 VYRYERSGVLHGLSRVRGFTQDDAHIFCLYEQLEKEVVKVLDLAKFMIDTFGFAKYKVML 364

Query: 428 STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAI 487
           STRPEK VG  A W+ A +I+   L+       + I+  V  GEG FYGPK +   +DA+
Sbjct: 365 STRPEKYVGELAKWEYATDILAKALEA------NGISYQVDPGEGVFYGPKIDIKFEDAL 418

Query: 488 GRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           GR WQ  TIQVDF LP RF    V    +     M+HR V GS+ERF+  + E + G  P
Sbjct: 419 GRAWQGPTIQVDFQLPERFEVSVVGEDGKDQPVAMVHRTVLGSMERFMSCLTEQYGGAFP 478

Query: 548 LWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIII 607
           +WLSP Q ++  I     E+A+++A  L+   + +E D R+ET+N KIR+  + KIP ++
Sbjct: 479 VWLSPKQVMIIPIADRHSEFAEKLACELREEEVRVEVDNRSETMNQKIRQAQLAKIPYML 538

Query: 608 ICGDKEASERSIGIR-RFGS 626
           + GDKE    SI +R R GS
Sbjct: 539 VVGDKEIETGSIALRSRIGS 558


>gi|332287873|ref|YP_004422774.1| threonyl-tRNA synthetase [Chlamydophila psittaci 6BC]
 gi|313848445|emb|CBY17449.1| threonyl-tRNA synthetase [Chlamydophila psittaci RD1]
 gi|325506736|gb|ADZ18374.1| threonyl-tRNA synthetase [Chlamydophila psittaci 6BC]
 gi|328915135|gb|AEB55968.1| threonyl-tRNA synthetase [Chlamydophila psittaci 6BC]
          Length = 635

 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 260/609 (42%), Positives = 370/609 (60%), Gaps = 21/609 (3%)

Query: 17  FPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIRH 75
            P   T +D A  I  S       V IN ++ DLS  + EG ++  +T  DP    +  H
Sbjct: 13  LPEGTTAADFASKIKNS--HYFAGVVINDQIKDLSTTLNEGDTLRFVTFTDPEGREIFLH 70

Query: 76  SCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSP 135
           + AHI+A+A+  +WP+    IGP+I+ GFYYDF      S D+   IE  M +I      
Sbjct: 71  TSAHILAQAILRLWPDAIPTIGPVIDQGFYYDF-ANLSISEDDFLMIENMMGQISEAKFA 129

Query: 136 FLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVK 195
             K+  ++ K   L E     +KVE+++ +P  E++T Y QGE+ DLCRGPH+ ST  VK
Sbjct: 130 VQKKTFNN-KQEALNEFANNPFKVELIQELPEGESITAYSQGEFMDLCRGPHLPSTAPVK 188

Query: 196 KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDL 255
            F KL++ + AYWRGD  R  L RIYG A+ T +EL ++L+ LEE+++RDHR L  ++DL
Sbjct: 189 AF-KLLRTSAAYWRGDPQRESLVRIYGVAFPTTKELKEHLHQLEEAKQRDHRVLGTKLDL 247

Query: 256 FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSY 314
           F   E  +G+ F+H +G  I+  LI Y +R  +   Y+EI TPQ++++ LW+ SGHW +Y
Sbjct: 248 FSQQECSAGMPFFHPRGMIIWDALIGYWKRLHQLAGYKEIQTPQLMNRSLWEVSGHWSNY 307

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
           R NM+ +K  D+       +A+KPMNCPG +  +   L SY++ P+R+AE G V+R E S
Sbjct: 308 RENMYTLKIDDED------YAIKPMNCPGCMLYYKTRLHSYKQFPLRIAEIGHVHRYEVS 361

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK- 433
           G+L GLMRVR F QDDAHVF T EQ+  E L I +L+  +Y  FG E   ++LSTRPEK 
Sbjct: 362 GALSGLMRVRAFHQDDAHVFLTPEQVEEETLNILHLVSELYSTFGLE-YHLELSTRPEKA 420

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
            +GSD LW+ A   ++  L  I +++   IN G    +GAFYGPK +  +KDAI R WQC
Sbjct: 421 TIGSDELWELATAALERAL--INSNTPFIINPG----DGAFYGPKIDIHVKDAIQRTWQC 474

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI 553
           GTIQ+D  LP RF   Y N+  EK  PVM+HRA+FGSIERF+GI+IE+FKG  PLWLSP 
Sbjct: 475 GTIQLDMFLPERFELEYTNAQGEKSTPVMLHRALFGSIERFLGILIEHFKGRFPLWLSPE 534

Query: 554 QAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
              + T+       AQ++A   +   L +  D  NE+++ KIR     ++  ++  GD+E
Sbjct: 535 HIRLITVADRHQPRAQKLATAWQKLGLIVTVDDSNESVSKKIRNAQNMQVNYMVTLGDRE 594

Query: 614 ASERSIGIR 622
             + ++ IR
Sbjct: 595 IEQNTLAIR 603


>gi|323447698|gb|EGB03610.1| hypothetical protein AURANDRAFT_55515 [Aureococcus anophagefferens]
          Length = 657

 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 247/558 (44%), Positives = 349/558 (62%), Gaps = 17/558 (3%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQE 128
           L  IRHS +HIMA AV+ ++ + VQV IGP IE+GFYYDF +E+  S  +L +I+K+M +
Sbjct: 58  LVKIRHSTSHIMALAVKRVFKDDVQVTIGPWIENGFYYDFYREEQISDKDLKRIKKEMDK 117

Query: 129 IIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG-EWFDLCRGPH 187
           II  D P +++ +  E+AR    ++ E +KVE+L+ I   + ++ YR G EW+DLC GPH
Sbjct: 118 IIKADLPIIREVVPREEARARLLAEGETFKVEVLDGI-TDDTISFYRIGDEWWDLCAGPH 176

Query: 188 VRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDH 246
           V STG +K K   L  VAGAYWRGD  R ML RIYGTAW    +L ++   LEE++KRDH
Sbjct: 177 VPSTGAIKPKAVALQSVAGAYWRGDEKREMLQRIYGTAWQENWQLAEHKRRLEEAKKRDH 236

Query: 247 RKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTL-ISYMRRKIKDDYEEINTPQVLDQHL 304
           R L +++DLF I E  G G+ FWH +G +I   +  ++     +  YE + TP + +  L
Sbjct: 237 RVLGKKLDLFSIQEAAGGGLCFWHPRGARIRMLMEDTWKAAHERGGYELLVTPHIANVDL 296

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W+ SGH+D Y   MF     D    +   + LKPMNCP H  V+   L+SYR+LP R AE
Sbjct: 297 WKTSGHFDFYAEGMF-----DQMDVEKEQYQLKPMNCPFHCLVYKDQLRSYRDLPFRWAE 351

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
            G+VYR E SG+L GLMRVRGFTQDDAH+FCT EQ+ +E + +  L   I   FGF+   
Sbjct: 352 LGTVYRYERSGTLQGLMRVRGFTQDDAHIFCTPEQLEDEIVAVLELTEEILSKFGFDDYE 411

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           + LSTRP+K VGSD +W  A   +KG LD      +   + GV  G GAFYGPK +  +K
Sbjct: 412 LMLSTRPDKAVGSDEIWTKATAALKGALD------RKGWDHGVDEGGGAFYGPKIDLKIK 465

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           DA+GR WQC T+Q DFNLP RF   Y  +  +   P+M+HRA+FGS+ERF  I++E+  G
Sbjct: 466 DALGRQWQCSTVQCDFNLPERFELEYRAASGQAERPIMVHRAIFGSLERFFAILLESCGG 525

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
           +LPLWL+P Q  +  +T  A ++++ +A       +  E D   + +N +IR    +++P
Sbjct: 526 DLPLWLAPTQMRLLPVTDDARDFSKAVAAKAAQRGIRCEIDSGKDRLNKQIRNAETQRVP 585

Query: 605 IIIICGDKEASERSIGIR 622
           I+ + G+KE +   + +R
Sbjct: 586 IMCVVGEKEMASGDLAVR 603


>gi|218245600|ref|YP_002370971.1| threonyl-tRNA synthetase [Cyanothece sp. PCC 8801]
 gi|257058646|ref|YP_003136534.1| threonyl-tRNA synthetase [Cyanothece sp. PCC 8802]
 gi|218166078|gb|ACK64815.1| threonyl-tRNA synthetase [Cyanothece sp. PCC 8801]
 gi|256588812|gb|ACU99698.1| threonyl-tRNA synthetase [Cyanothece sp. PCC 8802]
          Length = 607

 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 254/595 (42%), Positives = 368/595 (61%), Gaps = 21/595 (3%)

Query: 51  SDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK 110
           S  V E  I++    +  +L  IRH+ +HIMA AVQ ++P+ QV IGP  E GFYYDFD 
Sbjct: 7   SPEVSEQPIKLPRTSESDTLKRIRHTTSHIMAMAVQKLFPKAQVTIGPWTETGFYYDFDV 66

Query: 111 EQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN 170
            +PF+   L  I+K+M +II R  P +++ ++ E+A++  E  +E YK+EILE +  +  
Sbjct: 67  PEPFTEQNLKDIKKEMIKIINRKLPVIREEVTPEEAKKRIEQLQEPYKLEILEGL--QPP 124

Query: 171 VTLYRQG-EWFDLCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQ 228
           +TLY  G +W+DLC GPHV +TG +  K F L  VAGAYWRGD  +  L RIYGTAW T 
Sbjct: 125 ITLYHLGDQWWDLCAGPHVETTGDINPKAFDLETVAGAYWRGDETKAQLQRIYGTAWETP 184

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-K 286
           ++LT+Y    EE+ KRDHRKL +E+ LF  ++  G G+  W  KG  I  TL  +++R +
Sbjct: 185 EQLTEYKRRKEEALKRDHRKLGKELGLFIFSDPVGPGLPLWTPKGTIIRSTLEDFLKREQ 244

Query: 287 IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT-FALKPMNCPGHV 345
           +K  Y  + TP +    L++ SGHW +Y+ +MF +   +         FALKPMNCP H+
Sbjct: 245 LKRGYLSVVTPHIGRVDLFKISGHWQNYKEDMFPMMAENAEEAAQEIGFALKPMNCPFHI 304

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            ++   L+SYRELP+RLAEFG+VYR E SG L GL RVRGFT DD+H+F T +Q+  E L
Sbjct: 305 QIYKSELRSYRELPIRLAEFGTVYRYEQSGELGGLTRVRGFTVDDSHLFVTPDQLDAEFL 364

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTR-PE--KRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
            + +LI++++K    +    +LS R PE  K +GSD  W+ A+N ++  + T++      
Sbjct: 365 NVVDLILAVFKSLQLKNFKARLSFRDPESDKYIGSDEAWEKAQNAIRRAVQTLE------ 418

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
           ++     GE AFYGPK ++I  D + R+WQ GT+QVD+NLP RF   YV     +  PVM
Sbjct: 419 MDYFEAPGEAAFYGPKLDFIFHDVLEREWQLGTVQVDYNLPQRFELEYVAEDGTRQRPVM 478

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSI 582
           IHRA FGS+ER IGI+IE + G+ PLWLSPIQA +  ++   ++YA+E+A+ ++   +  
Sbjct: 479 IHRAPFGSLERLIGILIEEYAGDFPLWLSPIQARLLPVSDLQLDYAKEVASKMQQLGIRA 538

Query: 583 ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR-----RFGSTTTQKV 632
           E D   E +   +R    +KIP++ + G KE    S+ IR       G+  T +V
Sbjct: 539 EADTSGERLGKMVRNAEKQKIPVMGVIGAKEVESNSLSIRTRASGELGTIATDEV 593


>gi|152989860|ref|YP_001355582.1| threonyl-tRNA synthetase [Nitratiruptor sp. SB155-2]
 gi|151421721|dbj|BAF69225.1| threonyl-tRNA synthetase [Nitratiruptor sp. SB155-2]
          Length = 613

 Score =  484 bits (1247), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 250/596 (41%), Positives = 378/596 (63%), Gaps = 26/596 (4%)

Query: 39  VAVAINGKVCDLSDPVREGSIEI-----ITPED-PRSLAVIRHSCAHIMAEAVQSIWPEV 92
           +A+  +G++ DL    +  +I+I     I PE+ P +L VIRHS AH+MA+A++ ++P+ 
Sbjct: 4   IAIEKDGEILDLQ-TAQAKNIDIESAKKIYPENNPEALEVIRHSTAHLMAQAIKELYPDA 62

Query: 93  QVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFES 152
           +  +GP++++GFYYDF   Q  S ++L +IEKKMQEI  R     +  +   +A E F  
Sbjct: 63  KFFVGPVVDEGFYYDFRTSQKISEEDLPKIEKKMQEIAKRKLDITRYEIPKSEAIEKF-- 120

Query: 153 KKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDS 212
           K++  K E+L+SIP+ + V++Y+QG++ DLCRGPHV +T  +K F KL +VAGAY  GD 
Sbjct: 121 KEDDLKQEVLKSIPS-DVVSIYKQGDFEDLCRGPHVPNTKYLKHF-KLTRVAGAYLGGDE 178

Query: 213 NRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRK 271
            + ML+RIYG A+  ++ L  YL  +EE++KRDHRKL  EM+LF  +E+ G+G+  W  K
Sbjct: 179 TKEMLTRIYGVAFADKKSLKDYLTMIEEAKKRDHRKLGSEMELFMFSEEVGAGLPIWLPK 238

Query: 272 GWKI---FQTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTI 328
           G ++    ++L+    RK    YE +  P++L   LW++SGH+ +Y+ NM+  +  DD  
Sbjct: 239 GARLRSKLESLLFAAHRK--RGYEPVRGPEILKSDLWKKSGHYQNYKENMYFTEICDDET 296

Query: 329 KD--LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
           K      + +KPMNC GH+ ++    +SYRELP++  E+G V+R+E SG LHGL RVR F
Sbjct: 297 KKETCVEYGIKPMNCVGHIMIYKSKKRSYRELPLKFFEYGVVHRHEKSGVLHGLFRVREF 356

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
           TQDDAH+FC  EQ+ +  +++   +  I + F F K  +++ST+P+K +G DA+W+ A  
Sbjct: 357 TQDDAHIFCKPEQIKDIVIEVLGFVDEIMRSFNF-KYEMEISTKPKKAIGDDAIWEIATQ 415

Query: 447 IMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF 506
            +K  LD      ++    G+  G GAFYGPK +  + DAIGR WQCGTIQVDFNLP RF
Sbjct: 416 ALKEALD------ENGHEYGIDEGGGAFYGPKIDIKITDAIGRKWQCGTIQVDFNLPERF 469

Query: 507 NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVE 566
              + +S +    PVMIHRA+ GS ERFIGI+IE++ G  P +++P Q I   I  S V 
Sbjct: 470 ELEFTDSDNSAKRPVMIHRAILGSFERFIGILIEHYAGEFPFFIAPTQIIFVPIADSHVA 529

Query: 567 YAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           YA+E+ + L    +  E     +++N +IR    +K+P++ I GDKE   +S+ IR
Sbjct: 530 YAKELQDKLLQMDVDSEIYDSKDSLNKRIRNAEKQKVPMVAIIGDKEVESKSLAIR 585


>gi|218438366|ref|YP_002376695.1| threonyl-tRNA synthetase [Cyanothece sp. PCC 7424]
 gi|218171094|gb|ACK69827.1| threonyl-tRNA synthetase [Cyanothece sp. PCC 7424]
          Length = 608

 Score =  484 bits (1246), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 243/583 (41%), Positives = 364/583 (62%), Gaps = 16/583 (2%)

Query: 69  SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQE 128
           +L  IRH+ +HIMA AVQ ++P+ QV IGP  E+GFYYDFD  +PF+ ++L  I+K+M +
Sbjct: 26  TLKKIRHTTSHIMAMAVQQLFPKAQVTIGPWTENGFYYDFDTPEPFTEEDLKAIKKEMVK 85

Query: 129 IIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE-WFDLCRGPH 187
           II R  P +++ ++ E+A    ++  E YK+EILE I  +E +T+Y  G+ W+DLC GPH
Sbjct: 86  IIKRKLPVIREEVTREEAERRIQAINEPYKLEILEGI--QEPITIYHLGDKWWDLCAGPH 143

Query: 188 VRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDH 246
           V +T ++  K   L  VAGAYWRGD  +  L RIYGTAW T ++L +Y    EE+ KRDH
Sbjct: 144 VETTAEIDPKAIDLENVAGAYWRGDETKAQLQRIYGTAWETPEQLAEYKRRKEEALKRDH 203

Query: 247 RKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHL 304
           R+L RE+ LF  ++  G G+  W  KG  I  TL  ++++ +IK  Y  + TP +    L
Sbjct: 204 RRLGRELGLFIFSDAVGPGLPLWTPKGAIIRSTLEDFLKKEQIKRGYLPVVTPHIARIDL 263

Query: 305 WQQSGHWDSYRANMFAVKCAD-DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           ++ SGHW +Y+ +MF +   D ++  +   F LKPMNCP H+ ++   L+SYR+LP+RLA
Sbjct: 264 FKISGHWQNYKEDMFPMMAEDQESALNEMGFVLKPMNCPFHIQIYKSELRSYRDLPMRLA 323

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFG+VYR E SG L GL RVRGFT DD+H+F T EQ+  E L + +LI+S++     +  
Sbjct: 324 EFGTVYRYEQSGELGGLTRVRGFTVDDSHLFVTPEQLEEEFLSVVDLILSVFNSLQLKNF 383

Query: 424 MVKLSTR---PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
             +LS R    +K +G D +W+ AEN ++  +  +     +        GE AFYGPK +
Sbjct: 384 KARLSFRDPASDKYIGGDDVWNKAENAIRSAVQKLNMEHFE------APGEAAFYGPKLD 437

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           +I KDA+ R+WQ GT+QVD+NLP RF+  YV     +  PVMIHRA FGS+ER +GI+IE
Sbjct: 438 FIFKDALEREWQLGTVQVDYNLPERFDLEYVAEDGTRKRPVMIHRAPFGSLERLVGILIE 497

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
            + G+ PLWL+PIQ  +  ++   ++YA+++A  ++S  +  E D   E +   IR    
Sbjct: 498 EYAGDFPLWLAPIQVRLLPVSDPQLDYAKQVAAQMRSQGIRAEADTSGERLGKMIRNAEK 557

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +KIP++ + G KE    ++ IR   S     +++ + I  +T+
Sbjct: 558 QKIPVMGVVGAKEVESNTLSIRTRASGELGTMAVNEVIEKVTE 600


>gi|147669325|ref|YP_001214143.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Dehalococcoides
           sp. BAV1]
 gi|189083604|sp|A5FRB3|SYT_DEHSB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|146270273|gb|ABQ17265.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Dehalococcoides
           sp. BAV1]
          Length = 582

 Score =  484 bits (1246), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 252/561 (44%), Positives = 356/561 (63%), Gaps = 20/561 (3%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           L ++RHS AHIMAEAV S++PE ++ IGP I+ GFYYDFD  +  + ++L +IE +M ++
Sbjct: 14  LEIMRHSAAHIMAEAVLSMFPEAKLGIGPAIDTGFYYDFDLPRTLTPEDLPEIETRMNQL 73

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
           +  + PF ++ +S ++AR+LF +  + YK+E+L  I   E V++YRQG + DLCRGPHV 
Sbjct: 74  VKSNLPFRREEMSKDEARKLFAN--QPYKLELLNDI-TDETVSIYRQGNFCDLCRGPHVN 130

Query: 190 STGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKL 249
            T +VK F KL+ +AGAYWRGD  RPML RIYG A+  +  L +YL  LEE+ KRDHRKL
Sbjct: 131 YTSKVKAF-KLLSIAGAYWRGDEKRPMLQRIYGAAFLDKASLAEYLNMLEEAAKRDHRKL 189

Query: 250 AREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK--IKDDYEEINTPQVLDQHLWQ 306
            +E++LF + ++ G G++ W   G  I + LI    +K  +K  Y+ + TP +    LW+
Sbjct: 190 GKELELFSLHQEIGGGLVNWLPNG-AIVRHLIEEFWKKEHLKRGYDLVYTPHIAKVDLWK 248

Query: 307 QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFG 366
            SGHW  YR NM++    D        + LKPMNC  H+ +F +  +SY+ELP+R+AE G
Sbjct: 249 TSGHWGFYRENMYSPMDIDG-----EEYVLKPMNCVYHILMFKNRTRSYKELPIRMAELG 303

Query: 367 SVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK 426
           +VYR E SG LHGL RVRGFTQDDAH+FC  +Q+  E +K+ +L   +   FGF K  V 
Sbjct: 304 TVYRYERSGVLHGLSRVRGFTQDDAHIFCLYDQLEKEVVKVLDLAKFMIDTFGFTKYKVM 363

Query: 427 LSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDA 486
           LSTRPEK VG    W+ A +I+   L+       ++I   V  GEG FYGPK +   +DA
Sbjct: 364 LSTRPEKYVGELDKWEYATDILAKALEA------NQIPYQVDPGEGVFYGPKIDIKFEDA 417

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNL 546
           +GR WQ  TIQVDF LP RF+   V    +     M+HR V GS+ERF+  + E + G  
Sbjct: 418 LGRAWQGPTIQVDFQLPERFDVSVVGEDGKDQPVAMVHRTVLGSMERFMSCLTEQYGGAF 477

Query: 547 PLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPII 606
           P WLSP QA+V  I     E+A+++A  L+   + +E D R+ET+N KIR+  + KIP +
Sbjct: 478 PAWLSPKQAMVIPIADRHTEFAEKLACELREEEVRVEVDSRSETMNQKIRQAQLAKIPYM 537

Query: 607 IICGDKEASERSIGIR-RFGS 626
           ++ GDKE   +S+ +R R GS
Sbjct: 538 LVVGDKEIETQSVAVRTRTGS 558


>gi|51598972|ref|YP_073160.1| threonyl-tRNA synthetase [Borrelia garinii PBi]
 gi|73919774|sp|Q660F3|SYT_BORGA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|51573543|gb|AAU07568.1| threonyl-tRNA synthetase [Borrelia garinii PBi]
          Length = 582

 Score =  484 bits (1245), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 244/571 (42%), Positives = 359/571 (62%), Gaps = 16/571 (2%)

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           RHS AH+MAEAV  ++P  ++AIGP I+DGFYYDF+ + P + D L  IE +M+EI+   
Sbjct: 15  RHSIAHVMAEAVCDLFPNTKIAIGPPIKDGFYYDFEFKNPITEDSLLDIENRMREILKTG 74

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQ 193
           S F K+ +S E+A E+F  K E YK++++++   +  +++Y+   + DLCRGPHV +  +
Sbjct: 75  SSFEKEIISLEQALEIF--KDEPYKIDLIKNFDLQNEISIYKSHNFIDLCRGPHVDNMNK 132

Query: 194 VK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLARE 252
           +  K FKL  +AGAYWRG+    ML+RIYGT WN ++EL  YL   EE +KRDHRKL +E
Sbjct: 133 IDPKAFKLTGIAGAYWRGNEKNTMLTRIYGTLWNNEKELRSYLNLREEIKKRDHRKLGKE 192

Query: 253 MDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGH 310
           +DLF I E+ G G+IF+H  G KI   +  + R +  K+ Y+ + TP V    LWQ SGH
Sbjct: 193 LDLFSIHEEIGPGLIFFHPNGAKIRALIEDFWREEHSKNGYDILFTPHVGKSWLWQTSGH 252

Query: 311 WDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYR 370
            + Y+ +MF     D +      + LKPMNCP H+A++N G  SYR+LP R AE G+VYR
Sbjct: 253 LNFYKDSMFEKIEMDKS-----DYYLKPMNCPFHIAIYNTGKHSYRDLPFRWAELGTVYR 307

Query: 371 NEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR 430
            E  G+LHG+MR RGFTQDDAH+ CT  Q+ +E  ++    I ++  FGF  +   LST+
Sbjct: 308 YEKIGALHGMMRARGFTQDDAHIICTHSQVVDEIKEVLRFAIYMWSKFGFNSLKAYLSTK 367

Query: 431 PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRD 490
           P+K VG+++ W+ +  ++K  L      S   +   +  G GAFYGPK +  + D++ R+
Sbjct: 368 PDKSVGNNSDWEMSLKVLKEAL------SDFEVPYEIDKGGGAFYGPKIDLKIVDSLERE 421

Query: 491 WQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL 550
           WQ  TIQ DFNLP RFN  Y +   ++  P MIHRA+ GSIERF GI++E++ G  PLWL
Sbjct: 422 WQMSTIQFDFNLPERFNMTYTSEDGKEKRPFMIHRALLGSIERFFGILVEHYGGAFPLWL 481

Query: 551 SPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           S +QA++  + +   +Y  ++ N  K+  + I+ D  +  +N KIRE+  KKIP + I G
Sbjct: 482 SHVQAVIIPVNNIVEDYTIKVFNKFKNAGIRIKLDNSSSRMNAKIREYQAKKIPYMFIIG 541

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           ++EA E  I IR   +     + L +A+ ++
Sbjct: 542 EREAIEERISIRTRTNEQINGIELDEALKLI 572


>gi|288920333|ref|ZP_06414645.1| threonyl-tRNA synthetase [Frankia sp. EUN1f]
 gi|288348281|gb|EFC82546.1| threonyl-tRNA synthetase [Frankia sp. EUN1f]
          Length = 658

 Score =  484 bits (1245), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 258/659 (39%), Positives = 384/659 (58%), Gaps = 38/659 (5%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI-EI 61
           SD+++T   G      V   G+  AE       +  +A  + G+  DL+ P+  G + E 
Sbjct: 2   SDVRVTVQRGQQAEERVVRAGTTAAELFDGE--RSVIAARVGGRQRDLAHPLAAGDVVEP 59

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           IT + P   A++RHSCAH++A+AVQ ++P+ ++ IGP I+DGFYYDFD E+PF+ ++L  
Sbjct: 60  ITVDSPDGRAIVRHSCAHVVAQAVQDLFPKAKLGIGPPIQDGFYYDFDVERPFTPEDLKA 119

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEI--LESIPAKE---------- 169
           +EK+ QEII     F ++ ++ ++AR   E   E YK+E+  L+S    +          
Sbjct: 120 VEKRAQEIIKSGQRFSRRVVTDDEARA--ELADEPYKIELIGLKSSAGDDAEASVEVGAG 177

Query: 170 NVTLY-----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYG 222
            +T+Y     + GE  W DLCRGPHV +T  +  F  + + A AYWRG    P L RIYG
Sbjct: 178 ELTIYDNLDPKSGELCWKDLCRGPHVPTTRHIPAF-AVQRSAAAYWRGSERNPQLQRIYG 236

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLIS 281
           TAW +++ L +Y + L E+EKRDHR+L  E+DLF    E G G+  +H KG  I   +  
Sbjct: 237 TAWESREALKEYQHRLAEAEKRDHRRLGAELDLFSFPTEIGPGLAVFHPKGGAIRTVMED 296

Query: 282 YMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
           Y RR+ I+  YE +NTP +    L++ SGH D +   M+     D        + LKPMN
Sbjct: 297 YSRRRHIEAGYEFVNTPHITKSDLYEISGHLDWFADGMYPPMQLDGGAD----YYLKPMN 352

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
           CP H+ +F    +SYRELP+RL EFG+VYR E SG +HGL RVRG TQDDAH+FC +EQ+
Sbjct: 353 CPMHILIFRSRGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRVRGLTQDDAHLFCAREQL 412

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPE-KRVGSDALWDDAENIMKGVLDTIKNSS 459
             E   +   ++ + +D+G E   ++LSTRPE K +GSD  W +A  +++      + +S
Sbjct: 413 PEELDSVLKFVLGLLRDYGLEDFYLELSTRPEGKAIGSDEEWAEATELLR------EAAS 466

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
           +  +   +  G GAFYGPK     KDAIGR WQ  TIQVDF LP RF+  Y  +   +  
Sbjct: 467 KQDLELVMDEGGGAFYGPKISVQAKDAIGRTWQLSTIQVDFQLPQRFDMTYQAADGTRQR 526

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH 579
           P MIHRA+FG+IERF  I++E++ G LP WL+P+Q +   IT   V Y  ++A  L+   
Sbjct: 527 PFMIHRALFGTIERFFAILLEHYAGALPPWLAPVQVVGIPITDEHVPYLADVAAKLRERG 586

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           + +E D  ++ +  KIR    +K+P +++ GD++ S+ ++  R    T    V + +A+
Sbjct: 587 IRVEVDSSDDRMQKKIRTAQKQKVPFMLLAGDEDVSKGAVSFRFRDGTQRNGVPVDEAV 645


>gi|254431853|ref|ZP_05045556.1| threonyl-tRNA synthetase [Cyanobium sp. PCC 7001]
 gi|197626306|gb|EDY38865.1| threonyl-tRNA synthetase [Cyanobium sp. PCC 7001]
          Length = 575

 Score =  484 bits (1245), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 250/549 (45%), Positives = 334/549 (60%), Gaps = 17/549 (3%)

Query: 78  AHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFL 137
           +H+MA AVQ ++P+ QV IGP  E GFYYDFD   PFS  +L  I+K+M  II R  P  
Sbjct: 2   SHVMAMAVQKLFPKAQVTIGPWTETGFYYDFDSPDPFSEADLKAIKKEMIRIINRKLPLE 61

Query: 138 KQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE-WFDLCRGPHVRSTGQVK- 195
           +  +S  +A    +++ E YK+EIL  I   E +TLY  GE W+DLC GPHV +TG++  
Sbjct: 62  RLEVSRAEAEARIQAQNEPYKLEILAGI--TEPITLYTLGEEWWDLCAGPHVANTGELNP 119

Query: 196 KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDL 255
           + F L  VAGAYWRGD N   L RIYGTAW T ++L +Y    EE+ +RDHR+L  ++DL
Sbjct: 120 RAFDLESVAGAYWRGDENNAQLQRIYGTAWETPEQLAEYKRRQEEARRRDHRRLGTDLDL 179

Query: 256 FHIA-EDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDS 313
           F I  E G+G++FWH +G ++   + ++ R       YE + TP V D  LW+ SGH D 
Sbjct: 180 FSIEDEAGAGLVFWHPRGARMRLEIENFWREAHFAAGYELLYTPHVADIGLWKTSGHLDF 239

Query: 314 YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP 373
           Y  +MF     D+     R + LKPMNCP HV  +   L+SYRELP+R AE G+VYR E 
Sbjct: 240 YSESMFGPMQVDE-----REYQLKPMNCPFHVLTYASTLRSYRELPIRWAELGTVYRYER 294

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
            G +HGLMRVRGFTQDDAHVFC  EQ+ +E L I +L   I   F F    + LSTRPEK
Sbjct: 295 PGVMHGLMRVRGFTQDDAHVFCLPEQISDEILAILDLTERILSRFDFRSYEINLSTRPEK 354

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
            +G DA+W  A   +   LD  +     +++ G     GAFYGPK +  ++DAIGR WQC
Sbjct: 355 SIGEDAVWQLATQGLIEALD--RKGWAYKVDEG----GGAFYGPKIDLKIEDAIGRMWQC 408

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI 553
            TIQ+DFNLP RF+  YV +   +  P+MIHRA+FGS+ERF GIM EN+ G+ P WL+P 
Sbjct: 409 STIQLDFNLPERFDLHYVAADGSRQRPIMIHRAIFGSLERFFGIMTENYAGDFPFWLAPE 468

Query: 554 QAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
           Q  +  +T     YA+E+   LK   +    D   + +   IR     KIP++ + G KE
Sbjct: 469 QIRLLPVTDEVRPYAEELLGQLKGAGVRASVDHSGDRLGKLIRNGEQMKIPVLGVIGAKE 528

Query: 614 ASERSIGIR 622
           A   S+ +R
Sbjct: 529 AETGSVSLR 537


>gi|218282135|ref|ZP_03488434.1| hypothetical protein EUBIFOR_01014 [Eubacterium biforme DSM 3989]
 gi|218216861|gb|EEC90399.1| hypothetical protein EUBIFOR_01014 [Eubacterium biforme DSM 3989]
          Length = 587

 Score =  483 bits (1244), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 244/595 (41%), Positives = 376/595 (63%), Gaps = 21/595 (3%)

Query: 54  VREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQ 112
           + E  +E++   +   L+++ HSCAH+MA+AV+ ++P  +  +GP+I +GFYYD D  + 
Sbjct: 1   MEENKMELVNVLENEHLSMLNHSCAHMMAQAVKRLYPNAKFWVGPVISEGFYYDMDLGDV 60

Query: 113 PFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVT 172
               ++LA+IEK+M++I       +++ +S E A E+F  K + YK++++  +    N+T
Sbjct: 61  KLKEEDLAKIEKEMKKIAKDGKRIVREEISKEDALEMF--KDDPYKIDLINGL-EDGNIT 117

Query: 173 LYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELT 232
           +YRQGE+ DLCRGPHV +    K F KL+K +GAYW+GD+N  ML R+YG  ++T++EL 
Sbjct: 118 IYRQGEFADLCRGPHVETVKMCKNF-KLLKHSGAYWKGDANNKMLQRVYGICFDTKEELE 176

Query: 233 QYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDY 291
            +L  LEE++KRDH+KL +EM LF I+E   G+  +   G  +   L  Y  +   K+ Y
Sbjct: 177 AHLEALEEAKKRDHKKLGKEMGLFTISEFAPGMPIFLPDGMILRNILEQYWYQEHTKEGY 236

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           + I TP ++ + LW+ SGHWD Y+ NM+       ++ D R FA+KPMNCPG + V+N  
Sbjct: 237 QFIKTPIMMSKELWELSGHWDHYKDNMYT------SMVDDREFAIKPMNCPGALLVYNST 290

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI 411
           L SY++LP+RL E G V+R+E SG+L+GL RVR FTQDDAH+F T +Q+  E  K+  L+
Sbjct: 291 LHSYKDLPLRLGELGQVHRHEASGALNGLFRVRTFTQDDAHLFVTPDQLEEEVKKVLQLV 350

Query: 412 ISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
             IY  FG     ++LSTRPE   +GS+ +WD +E  +      +    + ++N G    
Sbjct: 351 DRIYSVFGL-PYEIELSTRPESGYIGSEEIWDVSEKALAQA--CVHAGKEYKVNPG---- 403

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           +GAFYGPK +  +KD++GR WQCGT+Q+D NLP RF   YV++   K  P+M+HR V+GS
Sbjct: 404 DGAFYGPKLDIHIKDSLGRVWQCGTVQLDMNLPERFECKYVDADGTKKTPIMLHRVVYGS 463

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNE 589
           +ERFIGI+IE+F G+ PLWL+P Q +V  +     VEYA ++ + L +  +    D RNE
Sbjct: 464 VERFIGILIEHFGGHFPLWLAPRQFVVIPVHHEKHVEYANKVCDALTALGMRATVDSRNE 523

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            + Y++RE  ++K+   I+ GD E    ++ IR+ G   +  +SL +A+     E
Sbjct: 524 KLGYRVREAQLQKVTYQIVVGDGEQENNTVTIRQSGKKDSVTLSLNEALAKFKAE 578


>gi|318057114|ref|ZP_07975837.1| threonyl-tRNA synthetase [Streptomyces sp. SA3_actG]
 gi|318075787|ref|ZP_07983119.1| threonyl-tRNA synthetase [Streptomyces sp. SA3_actF]
          Length = 658

 Score =  483 bits (1244), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 265/652 (40%), Positives = 391/652 (59%), Gaps = 47/652 (7%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           SD+++     S ++  V  TG+  A+       +  VA  ++G++ DL+  + EG ++E 
Sbjct: 2   SDVRVIIQRDSERDERVVTTGTTAADLFPGE--RTVVAARVDGELRDLAYVLGEGETVEP 59

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +       L ++RHS AH+MA+AVQ I+PE ++ IGP ++DGFYYDFD E+PF+ ++L  
Sbjct: 60  VEISSEDGLNILRHSTAHVMAQAVQEIFPEAKLGIGPPVKDGFYYDFDVEKPFTPEDLKA 119

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL--------ESIPAKE---- 169
           +EKKMQEI  R   F ++ +S + AR   E   E YK+E++        E   A E    
Sbjct: 120 VEKKMQEIQKRGQRFSRRVVSEDDARA--ELADEPYKLELIGLKGGSTSEDGSAVEVGGN 177

Query: 170 NVTLY-----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYG 222
            +T+Y     + GE  W DLCRGPH+ +T ++   FKLM+ A AYWRG    PML RIYG
Sbjct: 178 ELTIYDNLDAKTGELCWKDLCRGPHLPTT-RLIPAFKLMRNAAAYWRGSEKNPMLQRIYG 236

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLIS 281
           TAW ++ EL  +L FL E+EKRDHRKL  E+DLF   E+ G G+  +H KG  I + +  
Sbjct: 237 TAWPSKDELKAHLDFLAEAEKRDHRKLGNELDLFSFPEEVGPGLAVFHPKGGIIRRAMED 296

Query: 282 YMRRKIKDD-YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
           Y RR+ +++ YE + +P      L+Q+SGH D Y   M+     D+ +     + LKPMN
Sbjct: 297 YSRRRHEEEGYEFVYSPHTTKGALFQKSGHLDWYADGMYPPMQLDEGVD----YYLKPMN 352

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
           CP H  +F+   +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDDAH++CTKEQM
Sbjct: 353 CPMHNLIFDARGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRSRGFTQDDAHIYCTKEQM 412

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR-VGSDALWDDAENIMKGVLDTIKNSS 459
             E  K    ++++ +D+G +   ++LST+ EK+ VGSD +W++A   ++ V +      
Sbjct: 413 AEELDKTLTFVLNLLRDYGLDDFYLELSTKDEKKFVGSDEVWEEATATLRQVAE------ 466

Query: 460 QDRINTGVLL----GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS 515
                 G+ L    G  AFYGPK     +DAIGR WQ  T+Q+DFNLP RF+  Y  +  
Sbjct: 467 ----KQGLPLVPDPGGAAFYGPKISVQARDAIGRTWQMSTVQLDFNLPERFDLSYTAADG 522

Query: 516 EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLL 575
            +  PVMIHRA+FGSIERF  +++E++ G +P WL+P+QA+   +  + V Y +E A   
Sbjct: 523 SRQRPVMIHRALFGSIERFFAVLLEHYAGAMPPWLAPVQAVGIPVGDAHVPYLKEFAAEA 582

Query: 576 KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR-RFGS 626
           +   L ++ D  ++ +  KIR H  +K P ++I GD + +  ++  R R GS
Sbjct: 583 RRKGLRVDVDASSDRMQKKIRNHQKQKTPFMVIVGDDDMNAGTVSFRHRDGS 634


>gi|315225228|ref|ZP_07867045.1| threonine--tRNA ligase [Capnocytophaga ochracea F0287]
 gi|314944911|gb|EFS96943.1| threonine--tRNA ligase [Capnocytophaga ochracea F0287]
          Length = 646

 Score =  483 bits (1244), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 260/638 (40%), Positives = 390/638 (61%), Gaps = 20/638 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           IK+T PDGS+K +    T +++A SIS  LA+  ++ + NGK  +   P+  +GS+ + T
Sbjct: 2   IKITLPDGSVKEYQSGITPAEIAASISEGLARNVLSASFNGKTIETVTPLTTDGSLTLYT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQI 122
            + P       HS AHI+A+A++ ++P +++ IGP I +GFYYD D   +P S  +   I
Sbjct: 62  WDSPEGKKAFWHSSAHILAQALEELYPGIKLTIGPAIANGFYYDVDFNGKPISEKDFPAI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E K  EI     PF  + +S  +A  L+ + K  YK E++E++     +T      + DL
Sbjct: 122 EAKFLEIARGKHPFKMRPVSKAEAL-LYYAGKNEYKTELIEAL-EDGTITFCDHSTFTDL 179

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRG H+ +TG VK   K++  AGAYWRGD + P L+R+YG ++  Q+ELT+YL  LEE++
Sbjct: 180 CRGGHIPNTGFVKAV-KVLSAAGAYWRGDEHNPQLTRVYGISFPKQKELTEYLELLEEAK 238

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
           KRDHRKL +E++LF  +   G G+  W  KG  + + L +++R+  K   YE++ TP + 
Sbjct: 239 KRDHRKLGKELELFTFSNKVGQGLPLWLPKGAALRERLEAFLRKAQKQAGYEQVVTPHIG 298

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            ++L+  SGHWD Y  + F       T  +   + LKPMNCP H  ++N    SY++LP 
Sbjct: 299 HKNLYVTSGHWDKYGKDSFQPIA---TPNEGEEYLLKPMNCPHHCEIYNSHPWSYKDLPK 355

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R AEFG+VYR E SG LHGL RVR FTQDDAH+FCT EQ+ +E   + +L++ ++   GF
Sbjct: 356 RFAEFGTVYRYEQSGELHGLTRVRCFTQDDAHIFCTPEQLDDEFKHVIDLVLYVFGSLGF 415

Query: 421 EKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           +    ++S R    P K +GSD  W  AEN +      I  + +  ++  +  GE AFYG
Sbjct: 416 DNFTAQVSLRDPENPTKYIGSDENWAKAENAI------INAAKEKGLSYVIETGEAAFYG 469

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK ++++KDA+GR WQ GTIQVD+NLP RF+ +Y  + +E   PVMIHRA FGS+ERF+ 
Sbjct: 470 PKLDFMVKDALGRSWQLGTIQVDYNLPERFDLWYKGADNEMHRPVMIHRAPFGSMERFVA 529

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           I++E+  GN PLWL+P QAIV +++     YAQ++  LL++  +    D R ET+  KIR
Sbjct: 530 ILLEHTAGNFPLWLNPSQAIVLSLSEKYENYAQKVLRLLENSDIRTLIDNRAETMGKKIR 589

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           E   KKIP ++I G+ E  E ++ +R+ G      +S+
Sbjct: 590 EAETKKIPYMLIVGENEEKEGTVSVRKRGGEDLGSMSV 627


>gi|302518003|ref|ZP_07270345.1| threonyl-tRNA synthetase [Streptomyces sp. SPB78]
 gi|302426898|gb|EFK98713.1| threonyl-tRNA synthetase [Streptomyces sp. SPB78]
          Length = 658

 Score =  483 bits (1244), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 265/652 (40%), Positives = 391/652 (59%), Gaps = 47/652 (7%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           SD+++     S ++  V  TG+  A+       +  VA  ++G++ DL+  + EG ++E 
Sbjct: 2   SDVRVIIQRDSERDERVVTTGTTAADLFPGE--RTVVAARVDGELRDLAYVLGEGETVEP 59

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +       L ++RHS AH+MA+AVQ I+PE ++ IGP ++DGFYYDFD E+PF+ ++L  
Sbjct: 60  VEISSEDGLNILRHSTAHVMAQAVQEIFPEAKLGIGPPVKDGFYYDFDVEKPFTPEDLKA 119

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL--------ESIPAKE---- 169
           +EKKMQEI  R   F ++ +S + AR   E   E YK+E++        E   A E    
Sbjct: 120 VEKKMQEIQKRGQRFSRRVVSEDDARA--ELADEPYKLELIGLKGGSTSEDGSAVEVGGN 177

Query: 170 NVTLY-----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYG 222
            +T+Y     + GE  W DLCRGPH+ +T ++   FKLM+ A AYWRG    PML RIYG
Sbjct: 178 ELTIYDNLDAKTGELCWKDLCRGPHLPTT-RLIPAFKLMRNAAAYWRGSEKNPMLQRIYG 236

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLIS 281
           TAW ++ EL  +L FL E+EKRDHRKL  E+DLF   E+ G G+  +H KG  I + +  
Sbjct: 237 TAWPSKDELKAHLDFLAEAEKRDHRKLGNELDLFSFPEEVGPGLAVFHPKGGIIRRAMED 296

Query: 282 YMRRKIKDD-YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
           Y RR+ +++ YE + +P      L+Q+SGH D Y   M+     D+ +     + LKPMN
Sbjct: 297 YSRRRHEEEGYEFVYSPHTTKGALFQKSGHLDWYADGMYPPMQLDEGVD----YYLKPMN 352

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
           CP H  +F+   +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDDAH++CTKEQM
Sbjct: 353 CPMHNLIFDARGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRSRGFTQDDAHIYCTKEQM 412

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR-VGSDALWDDAENIMKGVLDTIKNSS 459
             E  K    ++++ +D+G +   ++LST+ EK+ VGSD +W++A   ++ V +      
Sbjct: 413 AEELDKTLTFVLNLLRDYGLDDFYLELSTKDEKKFVGSDEVWEEATATLQQVAE------ 466

Query: 460 QDRINTGVLL----GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS 515
                 G+ L    G  AFYGPK     +DAIGR WQ  T+Q+DFNLP RF+  Y  +  
Sbjct: 467 ----KQGLPLVPDPGGAAFYGPKISVQARDAIGRTWQMSTVQLDFNLPERFDLSYTAADG 522

Query: 516 EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLL 575
            +  PVMIHRA+FGSIERF  +++E++ G +P WL+P+QA+   +  + V Y +E A   
Sbjct: 523 SRQRPVMIHRALFGSIERFFAVLLEHYAGAMPPWLAPVQAVGIPVGDAHVPYLKEFAAEA 582

Query: 576 KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR-RFGS 626
           +   L ++ D  ++ +  KIR H  +K P ++I GD + +  ++  R R GS
Sbjct: 583 RRKGLRVDVDASSDRMQKKIRNHQKQKTPFMVIVGDDDMNAGTVSFRHRDGS 634


>gi|119513050|ref|ZP_01632106.1| threonyl-tRNA synthetase [Nodularia spumigena CCY9414]
 gi|119462292|gb|EAW43273.1| threonyl-tRNA synthetase [Nodularia spumigena CCY9414]
          Length = 602

 Score =  483 bits (1243), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 245/580 (42%), Positives = 363/580 (62%), Gaps = 21/580 (3%)

Query: 69  SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQE 128
           +L  IRH+ +H+MA AVQ ++P+ QV IGP IE+GFYYDFD  +PFS ++L  I+K+M +
Sbjct: 19  TLKQIRHTASHVMAMAVQKLFPKAQVTIGPWIENGFYYDFDSPEPFSENDLKAIKKEMVK 78

Query: 129 IIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG-EWFDLCRGPH 187
           II R  P +++ +S E+A +      E YK+EIL  I  +E +T+Y  G EW+DLC GPH
Sbjct: 79  IINRKLPVIREEVSREEAEKRISEIHEPYKLEILGDI-KQEPITIYHLGNEWWDLCAGPH 137

Query: 188 VRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDH 246
           V +T Q+  K  +L  VAGAYWRGD  +  L RIY TAW + ++L +Y    EE+ +RDH
Sbjct: 138 VENTSQLNPKAIELESVAGAYWRGDETKAQLQRIYATAWESPEQLAEYKRRKEEALRRDH 197

Query: 247 RKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHL 304
           RKL +E+ LF  +E  G G+  W  KG  +   L  ++++ ++K  Y  + TP +    L
Sbjct: 198 RKLGKELGLFIFSEQVGPGLPLWTPKGTLLRSVLEDFLKKEQLKRGYLPVVTPHIARVDL 257

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDL-RTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           ++ SGHW  Y+ +MF +   D+    L + F LKPMNCP H+ ++   L+SYRELP+RLA
Sbjct: 258 FKTSGHWQKYKEDMFPLMSDDEEAAALEQGFVLKPMNCPFHIQIYKSELRSYRELPIRLA 317

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFG+VYR E SG L GL RVRGFT DD+H+F T EQ+ +E L + +LI+S++K    +  
Sbjct: 318 EFGTVYRYEQSGELGGLTRVRGFTVDDSHLFVTPEQLDSEFLNVVDLILSVFKSLQLKNF 377

Query: 424 MVKLSTR---PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
             +LS R    +K +GS+ +WD AE  ++  ++ +       +N    +GE AFYGPK +
Sbjct: 378 KARLSFRDPASDKYIGSNEVWDKAEGAIRRAVEKLG------MNYFEGIGEAAFYGPKLD 431

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           +I  DA+ R+WQ GT+QVD+NLP RF+  YV     +  PVMIHRA FGS+ER IGI+IE
Sbjct: 432 FIFSDALEREWQLGTVQVDYNLPERFDLEYVAEDGSRQRPVMIHRAPFGSLERLIGILIE 491

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
            + G+ PLWL+P+QA +  +  + +++A+++A  + +  +  E D   + +   IR    
Sbjct: 492 EYAGDFPLWLAPVQARLLPVGEAQLDFAKDVAAKMVAEGIRAEVDTSGDRLGKIIRNAEK 551

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
           +KIP++ + G KE    S+ IR      T+    L AIP+
Sbjct: 552 QKIPVMAVIGAKEVESNSLSIR------TRASGELGAIPV 585


>gi|73748565|ref|YP_307804.1| threonyl-tRNA synthetase [Dehalococcoides sp. CBDB1]
 gi|289432591|ref|YP_003462464.1| threonyl-tRNA synthetase [Dehalococcoides sp. GT]
 gi|123732511|sp|Q3ZXB5|SYT_DEHSC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|73660281|emb|CAI82888.1| threonyl-tRNA synthetase [Dehalococcoides sp. CBDB1]
 gi|288946311|gb|ADC74008.1| threonyl-tRNA synthetase [Dehalococcoides sp. GT]
          Length = 582

 Score =  483 bits (1243), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 251/561 (44%), Positives = 355/561 (63%), Gaps = 20/561 (3%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           L ++RHS AHIMAEAV S++PE ++ IGP I+ GFYYDFD  +  + ++L +IE +M ++
Sbjct: 14  LEIMRHSAAHIMAEAVLSMFPEAKLGIGPAIDTGFYYDFDLPRTLTPEDLPEIETRMNQL 73

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
           +  + PF ++ +S ++AR+LF +  + YK+E+L  I   E V++YRQG + DLCRGPHV 
Sbjct: 74  VKSNLPFRREEMSKDEARKLFAN--QPYKLELLNDI-TDETVSIYRQGNFCDLCRGPHVN 130

Query: 190 STGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKL 249
            T +VK F KL+ +AGAYWRGD  RPML RIYG A+  +  L +YL  LEE+ KRDHRKL
Sbjct: 131 YTSKVKAF-KLLSIAGAYWRGDEKRPMLQRIYGAAFLDKASLAEYLNMLEEAAKRDHRKL 189

Query: 250 AREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK--IKDDYEEINTPQVLDQHLWQ 306
            +E++LF + ++ G G++ W   G  I + LI    +K  +K  Y+ + TP +    LW+
Sbjct: 190 GKELELFSLHQEIGGGLVNWLPNG-AIVRHLIEEFWKKEHLKRGYDLVYTPHIAKVDLWK 248

Query: 307 QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFG 366
            SGHW  YR NM++    D        + LKPMNC  H+ +F +  +SY+ELP+R+AE G
Sbjct: 249 TSGHWGFYRENMYSPMDIDG-----EEYVLKPMNCVYHILMFKNRTRSYKELPIRMAELG 303

Query: 367 SVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK 426
           +VYR E SG LHGL RVRGFTQDDAH+FC  +Q+  E +K+ +L   +   FGF K  V 
Sbjct: 304 TVYRYERSGVLHGLSRVRGFTQDDAHIFCLYDQLEKEVVKVLDLAKFMIDTFGFTKYKVM 363

Query: 427 LSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDA 486
           LSTRPEK VG    W+ A +I+   L+       ++I   V  GEG FYGPK +   +DA
Sbjct: 364 LSTRPEKYVGELDKWEYATDILAKALEA------NQIPYQVDPGEGVFYGPKIDIKFEDA 417

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNL 546
           +GR WQ  TIQVDF LP RF+   V    +     M+HR V GS+ERF+  + E + G  
Sbjct: 418 LGRTWQGPTIQVDFQLPERFDVSVVGEDGKDQPVAMVHRTVLGSMERFMSCLTEQYGGAF 477

Query: 547 PLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPII 606
           P WLSP Q +V  I     E+A+++A  L+   + +E D R+ET+N KIR+  + KIP +
Sbjct: 478 PAWLSPKQVMVIPIADRHTEFAEKLACELREEEVRVEVDSRSETMNQKIRQAQLAKIPYM 537

Query: 607 IICGDKEASERSIGIR-RFGS 626
           ++ GDKE   +S+ +R R GS
Sbjct: 538 LVVGDKEIETQSVAVRTRTGS 558


>gi|297565426|ref|YP_003684398.1| threonyl-tRNA synthetase [Meiothermus silvanus DSM 9946]
 gi|296849875|gb|ADH62890.1| threonyl-tRNA synthetase [Meiothermus silvanus DSM 9946]
          Length = 652

 Score =  483 bits (1242), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 260/653 (39%), Positives = 391/653 (59%), Gaps = 31/653 (4%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           + +  PDG   N P  AT ++ A++I   LAK A+   ++G++ DL  P+ +G+ ++I+T
Sbjct: 1   MNVYLPDGRELNLPDGATAAEAAKAIGPGLAKAAIGAIVDGELYDLMKPLPQGAKLKILT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIW------PE-VQVAIGPIIEDGFYYDFDKEQPFSS 116
            +DP    + RH+ AH++A+AV+  +      P+ V++AIGP+IE+GFYYD D  +P   
Sbjct: 61  EKDPEFAQLFRHTLAHVLAQAVREFFAAKGFDPDAVKLAIGPVIENGFYYDIDPPEPLGE 120

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
            +L +IE +M +I+  +    +  L  E+A   FE K + YK E+++ +P    ++ Y Q
Sbjct: 121 GDLPEIEARMHQIVKENLELRRFVLPREEALRRFEGK-DPYKTELIQDLPEGVEISFYAQ 179

Query: 177 GE----WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELT 232
           GE    + DLCRGPHV STG++  +FKL  +AGAYWRGDS RP L RIYG A+ +++EL 
Sbjct: 180 GEGTHGFTDLCRGPHVPSTGRIPPYFKLTHIAGAYWRGDSRRPQLQRIYGIAFRSKEELD 239

Query: 233 QYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD-D 290
            YL+  EE++KRDHRKL  E++LF I+E+ G G+  W  KG  I + L  YM  K ++  
Sbjct: 240 DYLWRQEEAKKRDHRKLGAELELFTISEEVGKGLPLWLPKGAFIRKQLEQYMYEKEQEYG 299

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH 350
           Y+ + TP +    L+  SGH   Y+ +M+A    +        + LKPMNCP H  ++  
Sbjct: 300 YDYVITPHIASSKLYYTSGHLPYYKDDMYAPIEIEG-----EEYYLKPMNCPHHHMIYKA 354

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
            L+SYR+LP+RLAEFG+VYR E SG+L GL RVRGFTQ+DAH++C+K Q+ +E +K+  L
Sbjct: 355 RLRSYRDLPLRLAEFGTVYRFELSGTLSGLARVRGFTQNDAHIYCSKSQVTDEFIKVIQL 414

Query: 411 IISIYKDFGFEKIMVKLS-----TRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
              +YKDFG      +LS       PEK       WD+A   ++  L+       + I  
Sbjct: 415 FDEVYKDFGISDYWFRLSLPDFENNPEKFGQPGPHWDEAIAAIRAALEQTGAQFVEGI-- 472

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
               GE  FYGPK +  ++  +G++    T Q+DF    RF   + N   EK  PV+IHR
Sbjct: 473 ----GEATFYGPKLDVQIRSVLGKEESIATNQLDFISGQRFGLEFTNEKGEKEVPVIIHR 528

Query: 526 AVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD 585
           A+ GS +RF    +E+  GN PLWLSPIQA++  I    +EYA++IA  +K+  L +E D
Sbjct: 529 AIMGSFDRFFAFYLEHTAGNFPLWLSPIQAVIVPIADRHLEYARQIAQAMKAAKLRVEVD 588

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
            R E +N KIR+  ++KIP+I++ GDKE  E +I +R   +   + + L + I
Sbjct: 589 DRPERMNAKIRDAELQKIPLILVVGDKEQEEGTINLRERQAKAQRTLKLEELI 641


>gi|282864200|ref|ZP_06273256.1| threonyl-tRNA synthetase [Streptomyces sp. ACTE]
 gi|282560687|gb|EFB66233.1| threonyl-tRNA synthetase [Streptomyces sp. ACTE]
          Length = 658

 Score =  483 bits (1242), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 265/669 (39%), Positives = 389/669 (58%), Gaps = 50/669 (7%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIEI- 61
           SD+++     S +   V  TG+  AE       +  VA  ++G++ DL+   ++G +   
Sbjct: 2   SDVRVIIQRDSEREEHVVTTGTTAAELFPGQ--RTVVAARVDGELRDLAYAPKDGEVVEP 59

Query: 62  --ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
             IT ED   L ++RHS AH+MA+AVQ ++PE ++ IGP ++DGFYYDFD E+PF+ ++L
Sbjct: 60  VEITSED--GLDILRHSTAHVMAQAVQELFPEAKLGIGPPVKDGFYYDFDVERPFTPEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN--------- 170
             +EKKMQEI  R   F ++ ++ E AR   E   E YK+E++    +  +         
Sbjct: 118 KAVEKKMQEIQKRGQRFSRRVVTDEAARA--ELADEPYKLELIGIKGSASSDDGADVEVG 175

Query: 171 ---VTLY-----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRI 220
              +T+Y     + G+  W DLCRGPH+ +T  +  F KLM+ A AYWRG    PML RI
Sbjct: 176 GGELTIYDNLDPKTGDLCWKDLCRGPHLPTTRFIPAF-KLMRNAAAYWRGSEKNPMLQRI 234

Query: 221 YGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTL 279
           YGTAW T+ +L  +L FLEE+ KRDHRKL  E+DLF   ++ G G+  +H KG  I + +
Sbjct: 235 YGTAWPTKDQLKAHLEFLEEAAKRDHRKLGNELDLFSFPDEIGPGLAVFHPKGGVIRRAM 294

Query: 280 ISYMRRKIKDD-YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKP 338
             Y RR+ +++ YE + +P      L+++SGH D Y   M+     DD +     + LKP
Sbjct: 295 EDYSRRRHEEEGYEFVYSPHATKGKLFEKSGHLDWYADGMYPPMQLDDGVD----YYLKP 350

Query: 339 MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE 398
           MNCP H  +F+   +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDDAH++CT+E
Sbjct: 351 MNCPMHNLIFDARGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRSRGFTQDDAHIYCTRE 410

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLSTR-PEKRVGSDALWDDAENIMKGVLDTIKN 457
           QM  E  +    ++++ +D+G     ++LST+ PEK VGSD  W++A   ++ V +    
Sbjct: 411 QMAEELDRTLTFVLNLLRDYGLTDFYLELSTKDPEKFVGSDEAWEEATETLRQVAE---- 466

Query: 458 SSQDRINTGVLL----GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS 513
                   G+ L    G  AFYGPK     KDAIGR WQ  T+Q+DFNLP RF+  Y   
Sbjct: 467 ------KQGLPLVPDPGGAAFYGPKISVQCKDAIGRTWQMSTVQLDFNLPERFDLEYTGP 520

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIAN 573
              K  PVMIHRA+FGSIERF  +++E++ G  P+WL+P+QA+   I  + + Y QE A 
Sbjct: 521 DGTKQRPVMIHRALFGSIERFFAVLLEHYAGAFPVWLAPVQAVGIPIGDTHIPYLQEFAA 580

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
             +   L +E D  ++ +  KIR H   K+P ++I GD + +  ++  R    +    + 
Sbjct: 581 EARKKGLRVEVDASSDRMQKKIRNHQKAKVPFMVIVGDDDMNAGTVSFRHRDGSQENGIP 640

Query: 634 LLDAIPILT 642
             +AI  L 
Sbjct: 641 RDEAIAKLV 649


>gi|160880797|ref|YP_001559765.1| threonyl-tRNA synthetase [Clostridium phytofermentans ISDg]
 gi|160429463|gb|ABX43026.1| threonyl-tRNA synthetase [Clostridium phytofermentans ISDg]
          Length = 584

 Score =  483 bits (1242), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 248/594 (41%), Positives = 370/594 (62%), Gaps = 17/594 (2%)

Query: 55  REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPF 114
           ++GSI     E+        H+ AH++A+AV+ ++P  + AIGP +E GFYYDF+ +  F
Sbjct: 6   KDGSIVERKFEELEGREAFWHTSAHVLAQAVKRLYPTTKCAIGPSVEQGFYYDFEFDFNF 65

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQY-LSHEKARELFESKKEAYKVEILESIPAKENVTL 173
           +++ L ++E  M+ II  +S  L+Q+ L+ E+A    + K E YK+EIL  +P    ++ 
Sbjct: 66  TAEHLQKVEDMMKAII-EESLVLQQFILNREEAIHYLKKKGEPYKLEILNELPIDAKISF 124

Query: 174 YRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQ 233
           + QGE+ DLC GPH+ +   +K   KL++VAGAYWRG  +  ML+RIYG ++  + +L  
Sbjct: 125 FEQGEFVDLCSGPHLSNVSYIKAL-KLIQVAGAYWRGKEDNKMLTRIYGISFPKKHDLEV 183

Query: 234 YLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYE 292
           YL   EE++ RDHRKL +E++LF   E+G G  F+  KG  I   L+ Y R+   ++ Y 
Sbjct: 184 YLKQQEEAKLRDHRKLGKELELFTFMEEGPGFPFFLPKGMVIKNLLLDYWRKLHEREGYV 243

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           EI+TP +L+++LW+ SGHWD Y+ NM+  K  D+       +A+KPMNCPG + V+    
Sbjct: 244 EISTPMMLNRNLWETSGHWDHYKENMYQTKIDDEI------YAIKPMNCPGGMLVYGSKP 297

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
           +SY+ELP+R  E G V+R+E SG LHGLMRVR FTQDDAH+F T+EQ+ +E   +  LI 
Sbjct: 298 RSYKELPLRFGELGLVHRHEKSGQLHGLMRVRCFTQDDAHLFMTEEQIKDEIKGVVRLID 357

Query: 413 SIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
            +YK FGF    V+LSTRPE  +GS   W+ A + +K  L+ ++      IN G    +G
Sbjct: 358 EVYKKFGF-TYHVELSTRPENSIGSLEDWEIATDALKMALEEMELPY--LINEG----DG 410

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           AFYGPK ++ LKD+IGR WQCG+IQ+DF LP RF   Y+ +  E   P+MIHR +FGSIE
Sbjct: 411 AFYGPKIDFHLKDSIGRTWQCGSIQLDFQLPLRFGIEYIGADGEAHRPIMIHRVIFGSIE 470

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
           RF GI+IE++ G  P WL+P+Q  + T++    +YAQ+I   LK   + +  D R+E + 
Sbjct: 471 RFFGILIEHYAGRFPTWLAPVQVKILTVSEQFNDYAQDILMELKQQGIRVSLDSRSEKLG 530

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           YK+RE  + KIP ++I G  E   + + +            + D I ++ KE++
Sbjct: 531 YKVREARLDKIPYVLIIGQMEMENKQVSVWNREEGDLGGYVVEDLISLIKKENV 584


>gi|308805643|ref|XP_003080133.1| putative threonyl-tRNA synthetase (ISS) [Ostreococcus tauri]
 gi|116058593|emb|CAL54300.1| putative threonyl-tRNA synthetase (ISS) [Ostreococcus tauri]
          Length = 625

 Score =  482 bits (1241), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 243/571 (42%), Positives = 355/571 (62%), Gaps = 20/571 (3%)

Query: 78  AHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFL 137
           AH+MA AVQ ++P  Q  IGP IE GFYYDF   + F++ ++ +I+K+M +II +D P  
Sbjct: 59  AHVMAMAVQKVFPSAQCTIGPWIERGFYYDFFYPEGFTNQDMKKIQKEMYKIIRKDYPLR 118

Query: 138 KQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG-EWFDLCRGPHVRSTGQV-K 195
           ++ +S E+A        E YK+EIL++I   E +T+Y  G EW+DLC GPHV STG++ +
Sbjct: 119 REEVSREEAERRIREINEPYKLEILDAIKT-EPITIYHIGDEWWDLCAGPHVESTGKLDQ 177

Query: 196 KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDL 255
             F+L  VAGAYWRGD  +PML RIYGTAW   ++L  Y  F EE+++RDHR + ++++L
Sbjct: 178 TAFELESVAGAYWRGDETKPMLQRIYGTAWENAEQLKAYTEFKEEAKRRDHRTIGKDLNL 237

Query: 256 FHIAED--GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWD 312
           F + +D  G G++FWH KG ++   + +Y +   +   YE + +P V  Q LWQ SGH D
Sbjct: 238 FSLQQDSAGGGLVFWHPKGAQMRHMIETYWKDLHLARGYELLYSPHVARQELWQTSGHSD 297

Query: 313 SYRANMFA-VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRN 371
            Y  NM+  +K  ++       + LKPMNCP H+ V+  G  SY++LP+R AE G+VYR 
Sbjct: 298 FYSENMYQPIKVEEEM------YQLKPMNCPFHIVVYQDGYYSYKDLPIRWAELGTVYRY 351

Query: 372 EPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP 431
           E SG++HGL RVRGFTQDDAH+FC  +Q+ +E  ++ +L   I   FGF    V LSTRP
Sbjct: 352 ERSGTMHGLFRVRGFTQDDAHIFCLPDQITSEIKRVLDLTEEILSTFGFTDFEVNLSTRP 411

Query: 432 EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDW 491
           EK VG DA+W  AEN ++   D +     D I   V  G GAFYGPK +  + DAIGR W
Sbjct: 412 EKSVGEDAIWTTAENALR---DALGEKGWDYI---VDDGGGAFYGPKIDIKILDAIGRKW 465

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLS 551
           QC T+Q+DFNLP RF+  Y++  + K  P+MIHRA+FGS+ERF GI+ EN+ G  PLWL+
Sbjct: 466 QCSTVQLDFNLPERFDLNYIDRDNNKQRPIMIHRAIFGSLERFFGILTENYAGEFPLWLA 525

Query: 552 PIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
           P+Q  +  +T    +Y + +A  L+     +E     + +   +R     KIP++ + G 
Sbjct: 526 PVQVRLLPVTDEVSDYTEGVAAKLREAGCRVEI-CTGQRLAKLVRTAEKAKIPVMAVVGR 584

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            EA+  ++ +R +       +S+ + +  +T
Sbjct: 585 DEAANNTLAVRTYKDGDVGSLSVDEVLSRIT 615


>gi|327314606|ref|YP_004330043.1| threonine--tRNA ligase [Prevotella denticola F0289]
 gi|326946255|gb|AEA22140.1| threonine--tRNA ligase [Prevotella denticola F0289]
          Length = 649

 Score =  482 bits (1241), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 251/639 (39%), Positives = 394/639 (61%), Gaps = 19/639 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           +K+TFPDGS++ +    TG  +AESIS +LA+  V+  +NG   +L+ P+  + +I +  
Sbjct: 2   VKITFPDGSVREYEQGVTGYQIAESISPALARDVVSCGVNGVTTELNRPINGDATIALYK 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF--DKEQPFSSDELAQ 121
            +D        H+ AH++AEA+Q ++P +Q   GP +E+GF+YD      Q  S ++  +
Sbjct: 62  FDDEEGKHTFWHTSAHLLAEALQELYPGIQFGFGPAVENGFFYDVMPAAGQTISENDFPR 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE+KM+E+  ++ P ++  +S   A + F +  + YKVE +E       ++ Y QG + D
Sbjct: 122 IEEKMRELARKNEPVIRHDVSKADAIKEFTADGQEYKVEHIEQDLEDGTISTYTQGHFTD 181

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ STG +K   K+  VAGA+WRGD+ R  ++RIYG  +  ++ L +YL  LEE+
Sbjct: 182 LCRGPHLVSTGAIKAI-KITSVAGAFWRGDAKREQMTRIYGITFPKKKMLDEYLVMLEEA 240

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQV 299
           +KRDHRK+ +EM+LF  ++  G G+  W  KG ++   L   +RR ++  +Y+E+ TP +
Sbjct: 241 KKRDHRKIGKEMELFMFSDRVGKGLPIWLPKGTQLRLRLQDLLRRLLRPYNYQEVITPGI 300

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             ++L+  SGH+  Y  + F       T ++   + LKPMNCP H  V+ +  +SY++LP
Sbjct: 301 GGKNLYVTSGHYAHYGKDSFQ---PIHTPEEDEEYMLKPMNCPHHCEVYAYKPRSYKDLP 357

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AEFG+V+R E SG LHGL RVR FTQDDAH+F   EQ+  E     ++I+ ++K FG
Sbjct: 358 LRIAEFGTVFRYEKSGELHGLTRVRTFTQDDAHIFVRPEQVKTEFETNIDIILKVFKTFG 417

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           F+    ++S R     EK +GSD +W+++E  +K      +   +  +   V LGE AFY
Sbjct: 418 FDNYEAQISLRDPNDKEKYIGSDEVWEESEAAIK------QACEEKGLKARVELGEAAFY 471

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDAIGR WQ GTIQVD+NLP+RF   Y    + K  PVMIHRA FGS+ERF 
Sbjct: 472 GPKLDFMVKDAIGRRWQLGTIQVDYNLPNRFKLEYTAEDNSKKTPVMIHRAPFGSLERFT 531

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE+  G+ PLWL+P Q  +  I+    +YA ++   L +H L    D RNE I  KI
Sbjct: 532 AVLIEHTAGHFPLWLTPDQVAILPISEKYNDYAFKVKAYLDAHDLRSIMDDRNEKIGRKI 591

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           R++ +K++P ++I G+KEA+E  + +R+ G      +++
Sbjct: 592 RDNELKRVPYMVIVGEKEAAEGLVSMRQQGGGEQATMTM 630


>gi|57234472|ref|YP_181487.1| threonyl-tRNA synthetase [Dehalococcoides ethenogenes 195]
 gi|123759710|sp|Q3Z8G2|SYT_DEHE1 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|57224920|gb|AAW39977.1| threonyl-tRNA synthetase [Dehalococcoides ethenogenes 195]
          Length = 582

 Score =  482 bits (1241), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 253/561 (45%), Positives = 356/561 (63%), Gaps = 20/561 (3%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           L ++RHS AHIMAEAV S++PE ++ IGP I+ GFYYDFD  +  + ++L +IE +M ++
Sbjct: 14  LEIMRHSAAHIMAEAVLSMFPEAKLGIGPAIDTGFYYDFDLPRTLTPEDLPEIETRMNQL 73

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
           +  + PF ++ +S ++AR+LF    + YK+E+L+ IP  E V++YRQG   DLCRGPHV 
Sbjct: 74  VKANLPFRREEMSKDEARKLFAD--QPYKLELLDDIP-DEIVSVYRQGNLCDLCRGPHVN 130

Query: 190 STGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKL 249
            T +VK F KL+ +AGAYWRGD  RPML RIYG A+  +  L +YL  LEES KRDHRKL
Sbjct: 131 YTSKVKAF-KLLSIAGAYWRGDEKRPMLQRIYGAAFLDKASLAEYLNMLEESAKRDHRKL 189

Query: 250 AREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK--IKDDYEEINTPQVLDQHLWQ 306
            +E++LF + ++ G G++ W   G  I + LI    +K  +K  Y  + TP +    LW+
Sbjct: 190 GKELELFSLHQEIGGGLVNWLPNG-AIVRHLIEEFWKKEHLKRGYSLVYTPHIAKVDLWK 248

Query: 307 QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFG 366
            SGHW  YR NM++    D        + LKPMNC  H+ +F +  +SY+ELP+R+AE G
Sbjct: 249 TSGHWGFYRENMYSPMDIDG-----EEYVLKPMNCVYHILMFKNRTRSYKELPIRMAELG 303

Query: 367 SVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK 426
           +VYR E SG LHGL RVRGFTQDDAH+FC  EQ+  E +K+ +L   +   FGF +  V 
Sbjct: 304 TVYRYERSGVLHGLSRVRGFTQDDAHIFCLYEQLEKEVVKVLDLAKFMIDTFGFTRYKVM 363

Query: 427 LSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDA 486
           LSTRPEK VG    W+ A +I+   L++      ++I   V  GEG FYGPK +   +DA
Sbjct: 364 LSTRPEKYVGELDKWEYATDILAKALES------NQIAYQVDPGEGVFYGPKIDIKFEDA 417

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNL 546
           +GR WQ  TIQVDF LP RF+   V    +     M+HR V GS+ERF+  + E + G  
Sbjct: 418 LGRAWQGPTIQVDFQLPERFDVSVVGEDGKDQPVAMVHRTVLGSMERFMSCLTEQYGGAF 477

Query: 547 PLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPII 606
           P+WLSP Q ++  I     E+A+++A  L+   + +E D R+ET+N KIR+  + KIP +
Sbjct: 478 PVWLSPKQVMLIPIADRHSEFAEKLACELREEEVRVEVDNRSETMNQKIRQAQLAKIPYM 537

Query: 607 IICGDKEASERSIGIR-RFGS 626
           ++ GDKE   +S+ IR R GS
Sbjct: 538 LVVGDKEIETQSVSIRTRSGS 558


>gi|158313600|ref|YP_001506108.1| threonyl-tRNA synthetase [Frankia sp. EAN1pec]
 gi|238686857|sp|A8LE67|SYT_FRASN RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|158109005|gb|ABW11202.1| threonyl-tRNA synthetase [Frankia sp. EAN1pec]
          Length = 658

 Score =  482 bits (1241), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 258/659 (39%), Positives = 382/659 (57%), Gaps = 38/659 (5%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI-EI 61
           SD+++T   G      V  TG+  AE       +  +A  + G   DLS P+  G + E 
Sbjct: 2   SDVRVTVQRGQQAEERVVRTGTTAAELFDGE--RSVIAARVGGLQRDLSHPLAAGDVVEP 59

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           IT + P   A++RHSCAH++A+AVQ ++P+ ++ IGP I+DGFYYDFD E+PF+ ++L  
Sbjct: 60  ITVDSPDGRAIVRHSCAHVVAQAVQDLFPKARLGIGPPIQDGFYYDFDVERPFTPEDLKA 119

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEI--LESIPAKE---------- 169
           +EK+ QEII     F ++ +S ++AR   E   E YK+E+  L+S    +          
Sbjct: 120 VEKRAQEIIKAGQRFARRVVSEDEARA--ELADEPYKIELIGLKSSAGDDAEAGVEVGEG 177

Query: 170 NVTLY-----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYG 222
            +T+Y     + GE  W DLCRGPHV +T  +  F  + + A AYWRG    P L RIYG
Sbjct: 178 ELTIYDNLDPKSGELCWKDLCRGPHVPTTRHIPAF-AVQRSAAAYWRGSERNPQLQRIYG 236

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLIS 281
           TAW ++  L  Y + L E+EKRDHR+L  E+DLF    E G G+  +H KG  I   +  
Sbjct: 237 TAWESRDALKAYQHRLAEAEKRDHRRLGAELDLFSFPTEIGPGLAVFHPKGGAIRTVMED 296

Query: 282 YMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
           Y RR+ I+  YE +NTP +    L++ SGH D +   M+     D        + LKPMN
Sbjct: 297 YSRRRHIEAGYEFVNTPHITKSDLYEISGHLDWFADGMYPPMQLDGGAD----YYLKPMN 352

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
           CP H+ +F    +SYRELP+RL EFG+VYR E SG +HGL RVRG TQDDAH+FC +EQ+
Sbjct: 353 CPMHILIFRSRGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRVRGLTQDDAHLFCAREQL 412

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPE-KRVGSDALWDDAENIMKGVLDTIKNSS 459
             E   +   ++ + +D+G E   ++LSTRP  K +GSD  W++A  +++      + +S
Sbjct: 413 PTELDTVLKFVLGLLRDYGLEDFYLELSTRPPGKAIGSDKEWEEATELLR------EAAS 466

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
           +  +   +  G GAFYGPK     +DAIGR WQ  TIQVDF LP RF+  Y  +   +  
Sbjct: 467 KQDLELVMDEGGGAFYGPKISVQARDAIGRTWQLSTIQVDFQLPQRFDMTYQAADGTRQR 526

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH 579
           P MIHRA+FG+IERF  I++E++ G LP WL+P+Q +   IT   V Y  ++A  L+   
Sbjct: 527 PFMIHRALFGTIERFFAILLEHYAGALPPWLAPVQVVGIPITDEHVPYLTDVAAKLRQRG 586

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           + +E D  ++ +  KIR    +K+P +++ GD++ ++ ++  R    T    V + +A+
Sbjct: 587 IRVEVDSSDDRMQKKIRTAQKQKVPFMLLAGDEDVAKGAVSFRFRDGTQRNGVPVDEAV 645


>gi|325269899|ref|ZP_08136509.1| threonine--tRNA ligase [Prevotella multiformis DSM 16608]
 gi|324987872|gb|EGC19845.1| threonine--tRNA ligase [Prevotella multiformis DSM 16608]
          Length = 649

 Score =  482 bits (1240), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 250/639 (39%), Positives = 395/639 (61%), Gaps = 19/639 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           +K+TFPDGS++ +    TG  +AESIS +LA+  V+  +NG   +L+ P+  + +I +  
Sbjct: 2   VKITFPDGSVREYEQGVTGYQIAESISPALARDVVSCGVNGVTTELNRPINGDATIALYK 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF--DKEQPFSSDELAQ 121
            +D        H+ AH++AEA+Q ++P +Q   GP +E+GF+YD      Q  S ++  +
Sbjct: 62  FDDEEGKHTFWHTSAHLLAEALQELYPGIQFGFGPAVENGFFYDVMPADGQTISENDFPK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE+KM+E+  ++ P ++  +S   A + F +  + YKVE +E       ++ Y QG + D
Sbjct: 122 IEEKMRELAKKNEPVVRHDVSKADAIKEFTADGQEYKVEHIEQDLEDGTISTYTQGHFTD 181

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ STG +K   K+  VAGA+WRGD+ R  ++RIYG  +  ++ L +YL  LEE+
Sbjct: 182 LCRGPHLVSTGAIKAI-KITSVAGAFWRGDAKREQMTRIYGITFPKKKMLDEYLVMLEEA 240

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQV 299
           +KRDHRK+ +EM+LF  ++  G G+  W  KG ++   L   +RR ++  +Y+E+ TP +
Sbjct: 241 KKRDHRKIGKEMELFMFSDRVGKGLPIWLPKGTQLRLRLQDLLRRLLRPYNYQEVITPGI 300

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             ++L+  SGH+  Y  + F       T ++   + LKPMNCP H  V+ +  +SY++LP
Sbjct: 301 GGKNLYVTSGHYAHYGKDSFQ---PIHTPEEDEEYMLKPMNCPHHCEVYAYKPRSYKDLP 357

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AEFG+V+R E SG LHGL RVR FTQDDAH+F   EQ+  E     ++I+ ++K FG
Sbjct: 358 LRIAEFGTVFRYEKSGELHGLTRVRTFTQDDAHIFVRPEQVKTEFETNIDIILKVFKTFG 417

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           F+    ++S R     EK +GSD +W+++E  +K      +   +  +   V LGE AFY
Sbjct: 418 FDNYEAQISLRDPNDKEKYIGSDEVWEESEAAIK------QACEEKGLKARVELGEAAFY 471

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDAIGR WQ GTIQVD+NLP+RF   Y    + K  PVMIHRA FGS+ERF 
Sbjct: 472 GPKLDFMVKDAIGRRWQLGTIQVDYNLPNRFKLEYTAEDNSKKTPVMIHRAPFGSLERFT 531

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE+  G+ PLWL+P Q  +  I+    +YA ++   L +H++    D RNE I  KI
Sbjct: 532 AVLIEHTAGHFPLWLTPDQVAILPISEKYNDYAFKVKAYLDAHNVRSIMDDRNEKIGRKI 591

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           R++ +K++P ++I G+KEA+E  + +R+ G      +++
Sbjct: 592 RDNELKRVPYMVIVGEKEAAEGLVSMRQQGGGEQATMTM 630


>gi|284054770|ref|ZP_06384980.1| threonyl-tRNA synthetase [Arthrospira platensis str. Paraca]
          Length = 525

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 246/517 (47%), Positives = 325/517 (62%), Gaps = 40/517 (7%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L  IRH+CAHI+A AVQ ++PE +VAIGP  + GFYYDFD+++PF+ ++L +I K+
Sbjct: 18  DREKLRRIRHTCAHILAMAVQKLFPETKVAIGPTTDTGFYYDFDRKEPFTPEDLGEITKE 77

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE------- 178
           M+ II  + P +++ ++ E+ R   +   E  K+EIL+SIP  E +T Y  G        
Sbjct: 78  MKRIIKGNLPVIREEVNREQMRGEIQQLNEPLKLEILDSIPETETMTRYFIGSPDMGRAV 137

Query: 179 -------------------WFDLCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLS 218
                              W+DLC GPH+ STG++      L  VAGAYWRGD   P L 
Sbjct: 138 HPEVEPSLMEPVVIPPQEFWWDLCAGPHLNSTGEINPDALALESVAGAYWRGDETLPQLQ 197

Query: 219 RIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQ 277
           RIYGTAW T ++L  Y    EE++KRDHRKL +E+DLF I ED G G++FWH KG ++  
Sbjct: 198 RIYGTAWETPEQLEYYWQQKEEAKKRDHRKLGQELDLFSIQEDAGGGLVFWHPKGSRMRL 257

Query: 278 TLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFAL 336
            +  Y R+  ++  YE + TP + +  LW+ SGH+D YR NMF     D    + +++ L
Sbjct: 258 LIEDYWRQAHLQGGYELLYTPHIANLALWKTSGHYDFYRENMF-----DQIEIENQSYQL 312

Query: 337 KPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT 396
           KPMNCP HV  +   L SYRELP+R AE G+VYR E SG LHGLMRVRGFTQDDAH+FC 
Sbjct: 313 KPMNCPFHVLTYQSHLHSYRELPIRWAELGTVYRYERSGVLHGLMRVRGFTQDDAHIFCL 372

Query: 397 KEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIK 456
            EQ+ +E L + NL   I  DFGF K  V LSTRP K VG+D +W  A + +   L+   
Sbjct: 373 PEQVADEILGVLNLTEKILSDFGFSKYEVNLSTRPSKSVGNDGVWQLATDALISALNI-- 430

Query: 457 NSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE 516
               D +   V  G GAFYGPK +  ++DAI R WQC TIQVDFNLP RFN  YV +   
Sbjct: 431 -KGWDYV---VDEGGGAFYGPKIDIKIQDAIARLWQCSTIQVDFNLPERFNMEYVAADGS 486

Query: 517 KCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI 553
           +  P+MIHRA+FGS+ERF GI+IEN+ G+ PLWL+P+
Sbjct: 487 RQRPIMIHRAIFGSLERFFGILIENYAGDFPLWLAPV 523


>gi|332638317|ref|ZP_08417180.1| threonyl-tRNA synthetase [Weissella cibaria KACC 11862]
          Length = 658

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 253/643 (39%), Positives = 390/643 (60%), Gaps = 24/643 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEI 61
           +D+K+TFPDG++K FP   T  ++A  IS+SLAKK+V+  +NG    ++D + E G   +
Sbjct: 2   ADVKITFPDGAVKEFPAGVTPLEIANGISKSLAKKSVSGKLNGHYVGMNDGINEDGEFSL 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWP-EVQVAIGPIIEDGFYYDFDK--EQPFSSDE 118
           IT +D     ++RHS +H++A+A+  ++P ++   +GP IE+GFYYD DK      S+D+
Sbjct: 62  ITKDDAEGTQLLRHSVSHLLAQALNRLYPDQIHYGVGPAIENGFYYDTDKVDGSQISADQ 121

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
             +IEK M++I + + P + + ++ ++A E+F  K + YK+E++  +PA E++++  QGE
Sbjct: 122 FPEIEKMMKQIASENLPIVSREITRDEALEMF--KNDPYKIELINDLPADEHISIAVQGE 179

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             +L RG  V ST  +K F KL  VAGAYWRG S+ PML RIYGTA+ T +EL   L   
Sbjct: 180 HVELDRGGLVPSTNWIKHF-KLTSVAGAYWRGKSSNPMLQRIYGTAFWTAEELDAELKRR 238

Query: 239 EESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINT 296
           EE+++RDHRK+  E DLF  +++ G+G+  W   G  I +TL  Y+  R+++D Y+ + T
Sbjct: 239 EEAKERDHRKIGAEQDLFFTSQEVGAGLAVWMPNGAAIRRTLERYIVDREVQDGYQHVYT 298

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P + + +L++QSGHWD YR +MF        + D     L+PMNCP H+ VF H  +SYR
Sbjct: 299 PIMSNLNLYKQSGHWDHYRDDMFPPM----DMGDGEFLELRPMNCPSHIMVFKHKPRSYR 354

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ELP R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  KI  L+I +Y 
Sbjct: 355 ELPFRIAELGMMHRYEKSGALTGLSRVREMTLNDGHTFVMPDQIEDEFKKILGLMIDVYA 414

Query: 417 DFGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
           DF       +LS R     EK    D +W+ A+ ++K  +D ++      ++     GE 
Sbjct: 415 DFDITDYRFRLSYRDPENTEKYYDDDDMWEKAQTMLKKAMDDLE------LDYFEAEGEA 468

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           AFYGPK +  +K A+G +    TIQ+DF LP RF+  YV    E   PVMIHR +  ++E
Sbjct: 469 AFYGPKLDVQIKTALGGEETLSTIQLDFLLPERFDVNYVGPDGELHRPVMIHRGIISTME 528

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETI 591
           RF   + E +KG  P WL+P Q  +  +   A  ++A+++A+ L    +  E + RNE +
Sbjct: 529 RFTAYLTEMYKGAFPTWLAPHQVRIIPVNRDAHGKFAKDLADRLIKQGIRAEYEDRNEKL 588

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
            Y IR+    K+P  ++ GD+E +  ++ IRRFGST T+  S+
Sbjct: 589 GYLIRDAQTSKVPYTLVIGDEEVNNNTVTIRRFGSTDTKSKSV 631


>gi|21674935|ref|NP_663000.1| threonyl-tRNA synthetase [Chlorobium tepidum TLS]
 gi|34222753|sp|Q8KAN0|SYT_CHLTE RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|21648164|gb|AAM73342.1| threonyl-tRNA synthetase [Chlorobium tepidum TLS]
          Length = 657

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 252/626 (40%), Positives = 379/626 (60%), Gaps = 16/626 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPE 65
           +T PDGS + +    TG ++AESI + LA+ A+A  I+GK  DL  PV E + + IIT +
Sbjct: 13  ITLPDGSERTYSSGVTGLEIAESIGKKLAEAALAFTIDGKPRDLDTPVTENARVSIITFD 72

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
            P    +  HS +H+MA A++ ++P  +   GP IE GFYYD   E  F+ ++L  IE K
Sbjct: 73  SPEGKEIFWHSSSHLMAHAIEELFPGAKFGAGPAIEQGFYYDIACEHRFNEEDLRAIEAK 132

Query: 126 MQEIIARDSPFLKQYLSHEKARELFES-KKEAYKVEILE-SIPAKENVTLYRQGEWFDLC 183
           M EI  R+    ++ +  E+A E F + +K+ YKVEILE ++     V++Y Q  + DLC
Sbjct: 133 MLEISKRNLSINREEMPREQAIEYFSNERKDPYKVEILEDTLKDVPTVSVYHQDGFADLC 192

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+ STG+VK    L  ++ +YWRGDS+R  + RIYG  + + + L +++  LEE+ K
Sbjct: 193 SGPHLPSTGKVKAVL-LTNISSSYWRGDSSRETMQRIYGITFPSDKLLKEHIARLEEARK 251

Query: 244 RDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLD 301
           RDHRKL  E+ LF +  E GSG+  W   G  I   L ++++  + K  Y  + TP + +
Sbjct: 252 RDHRKLGAELGLFMLTPEVGSGLPIWLPNGAIIRNELETFLKAEQRKRGYVPVYTPHIGN 311

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             L+++SGH+  Y  + F      D       + LKPMNCP H  +++  L+SYR+LP+R
Sbjct: 312 IELYKRSGHYPYYSDSQFPPLTYKDETGREEQYLLKPMNCPHHHLIYSQTLRSYRDLPIR 371

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           L EFG+VYR+E SG L+GL+R RGFTQDD+H++C  +Q+ +E     +L   ++   GF+
Sbjct: 372 LTEFGTVYRHEQSGELNGLVRARGFTQDDSHIYCRPDQLVDEICNAIDLTRFVFNTLGFD 431

Query: 422 KIMVKLSTR-PE---KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           ++  +LS   PE   K  G+  +W  AE  +K   D +       I   + +GE +FYGP
Sbjct: 432 EVETRLSLHDPENQSKYGGTAEVWGQAEKDVKEAADRMG------IKYFIGIGEASFYGP 485

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K ++I++DAIGR WQ GT+QVD+ +P RF+  Y+ S  +K  PV+IHRA FGS+ERFIG+
Sbjct: 486 KIDFIVRDAIGRKWQLGTVQVDYVMPERFDLSYIGSDGQKHRPVVIHRAPFGSMERFIGV 545

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE+  GN PLWL+P+QA+V  I     +YA+E+   L    +  E D R+E I  KIRE
Sbjct: 546 LIEHTAGNFPLWLAPVQAVVLPIAEEVHDYAREVYAKLHEAGIRTELDLRSEKIGKKIRE 605

Query: 598 HSIKKIPIIIICGDKEASERSIGIRR 623
             + KIP +++ G  E  +  + +RR
Sbjct: 606 AELSKIPAMLVIGRNEQEKGEVSLRR 631


>gi|325287305|ref|YP_004263095.1| threonyl-tRNA synthetase [Cellulophaga lytica DSM 7489]
 gi|324322759|gb|ADY30224.1| threonyl-tRNA synthetase [Cellulophaga lytica DSM 7489]
          Length = 647

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 264/649 (40%), Positives = 395/649 (60%), Gaps = 20/649 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+T PDG++K F   +T  DVA+SIS   A+  ++   N    +   P+ E GS+ + T
Sbjct: 2   IKITLPDGTLKEFSEGSTPMDVAKSISEGFARNVISAKFNDTTVETVTPLTEDGSLVLYT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD--KEQPFSSDELAQ 121
            +D        HS +HI+A+A++ ++P V++ IGP IE+GFYYD D  + +  S  +  +
Sbjct: 62  WKDTEGKQAFWHSSSHIVAQAIEELYPGVKLTIGPSIENGFYYDVDLGEGRSISDKDFPK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEKK  EI      F  + ++ ++A  L++ +   YK E++E++     +T      + D
Sbjct: 122 IEKKAIEIARGKHDFKIRSVTKDEALALYKEQGNEYKTELIENL-EDGTITFCDHDTFTD 180

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG H+ +TG VK   K++ VAGAYWRGD N+P L+RIYG ++  Q+ELT+YL  LE++
Sbjct: 181 LCRGGHIPNTGIVKAI-KILSVAGAYWRGDENKPQLTRIYGISFPKQKELTEYLELLEQA 239

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           ++RDHRKL +E++LF  ++  G+G+  W  KG  + + L +++++ + K  YE + TP +
Sbjct: 240 KQRDHRKLGKELELFTFSQKVGAGLPLWLPKGAALRERLENFLKKAQKKAGYEMVVTPHI 299

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             + L+  SGH+  Y  + F       T K    F LKPMNCP H  VFN    SY++LP
Sbjct: 300 GQKELYVTSGHYAKYGEDSFQ---PIKTPKMDEEFLLKPMNCPHHCEVFNFKPHSYKDLP 356

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
            R AEFG+VYR E SG LHGL RVRGFTQDDAH+FCT +Q+  E   + +L + +    G
Sbjct: 357 KRFAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCTPDQLDQEFKNVIDLSLYVLNSLG 416

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           F     ++S R    P+K +GS   W+ AEN    +++  K    D +   +  GE AFY
Sbjct: 417 FTNFKAQVSVRDLNNPDKYIGSVENWEKAEN---AIINAAKEKGLDYV---IESGEAAFY 470

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDA+GR+WQ GTIQVD+NLP RF+  Y  S +E   PVMIHRA FGS+ERFI
Sbjct: 471 GPKLDFMVKDALGRNWQLGTIQVDYNLPERFDLTYKGSDNEDHRPVMIHRAPFGSMERFI 530

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            +++E+  GN PLWL P QAIV  ++    +YA+++ N L++  +    D RNET+  KI
Sbjct: 531 ALLLEHTGGNFPLWLIPDQAIVLPVSEKYEKYAKKVLNSLENDEIRALLDNRNETVGKKI 590

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           RE  + KIP +II G+ E +  +I +R+ G      +S+ D   ++T E
Sbjct: 591 REAEMNKIPFMIIIGENEEATNTISVRKHGGEDLGSISIKDFSDLVTSE 639


>gi|294790871|ref|ZP_06756029.1| threonine--tRNA ligase [Scardovia inopinata F0304]
 gi|294458768|gb|EFG27121.1| threonine--tRNA ligase [Scardovia inopinata F0304]
          Length = 685

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 250/631 (39%), Positives = 375/631 (59%), Gaps = 37/631 (5%)

Query: 36  KKAVAVAINGKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           K  +AV +NG+  DL  P++ G  +E I       LA++RHS  H+MA+AVQ I+P+ ++
Sbjct: 33  KSVIAVRLNGQPRDLYTPLKAGDFVESIDINSKDGLAIMRHSATHVMAQAVQEIYPQAKL 92

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            IGP+IEDGFYYDFD ++PF+ +++ +IEK+MQ II     F ++ ++ ++AR+  E   
Sbjct: 93  GIGPVIEDGFYYDFDVDKPFTPEDMKEIEKRMQRIIKSSQSFRRRIVTEDQARQ--EEAD 150

Query: 155 EAYKVEILESIP-----------AKENVTLY----RQGE--WFDLCRGPHVRSTGQVKKF 197
           + YK+E+++S             ++  +T+Y    R+G   W DLC GPH+ +T  +K F
Sbjct: 151 QPYKLELIDSAEEAIDQGKDTEVSQGQLTMYDNCDREGTVVWTDLCHGPHLPNTRYIKAF 210

Query: 198 FKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFH 257
            KL + AGAYWRG    PML RIYGTAW ++++L  YL  LEE+ KRDHRKL  EMDLF 
Sbjct: 211 -KLQRTAGAYWRGSEKNPMLQRIYGTAWASKEDLKAYLQRLEEAAKRDHRKLGAEMDLFS 269

Query: 258 IAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYR 315
             ++ G G+  +H KG  +   +  Y R    K+ Y  + TP +    L++ SGH   Y+
Sbjct: 270 FPDEIGPGLAVFHPKGAAVINAMKEYSRIEHRKNHYSFVQTPHITKGGLYETSGHLQWYK 329

Query: 316 ANMFAVKCADD-------TIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV 368
             M+     D+        I++   + LKPMNCP H  +F    +SYRELP+RL EFG+V
Sbjct: 330 DGMYPPMHLDEEKDANGKVIREGFDYYLKPMNCPMHNLIFKSRQRSYRELPLRLFEFGTV 389

Query: 369 YRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLS 428
           YR E SG +HGL RVRG TQDD+H++CT+EQM  E   + + ++ + KDFG     ++LS
Sbjct: 390 YRYEKSGVVHGLTRVRGLTQDDSHIYCTREQMKGELTSLLSFVLKLLKDFGLNDFYLELS 449

Query: 429 TRPE-KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAI 487
           T+ E K VGSD +W++A   +  V    ++S  D ++     G  AFYGPK     +DA+
Sbjct: 450 TKDEHKYVGSDEIWEEATRTLAEV---ARDSGLDLVDDP---GGAAFYGPKISVQARDAL 503

Query: 488 GRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           GR WQ  TIQ+DFNLP RF   Y+ +   +  PVMIHRA+FG+IERF  I++E++ G  P
Sbjct: 504 GRTWQLSTIQLDFNLPERFGLEYIAADGTRQRPVMIHRALFGAIERFFAILLEHYAGAFP 563

Query: 548 LWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIII 607
            WL+P+Q +   ++ +  +Y +EI + L    +  E D  ++    KIR  S  K P I+
Sbjct: 564 AWLAPVQVLGVPVSEANSDYLKEILDRLDESLVRCEMDASDDRFGKKIRNASKSKTPFIL 623

Query: 608 ICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           I GD + +  ++  R    +    V++ +A+
Sbjct: 624 IVGDDDQARGAVSFRFRDGSQLNGVAVDNAL 654


>gi|317503053|ref|ZP_07961132.1| threonine--tRNA ligase [Prevotella salivae DSM 15606]
 gi|315665826|gb|EFV05414.1| threonine--tRNA ligase [Prevotella salivae DSM 15606]
          Length = 649

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 249/631 (39%), Positives = 389/631 (61%), Gaps = 19/631 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           +K+TFPDGS++ +    TG  +AESIS +LA+  V+  +NG+  +L+ P+ E  +  +  
Sbjct: 2   VKITFPDGSVREYEQGVTGLQIAESISPALARNVVSCGVNGETVELNRPINEDANFTLYK 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF--DKEQPFSSDELAQ 121
            ED        H+ AH++AEA+Q ++P++Q   GP +E+GF+YD    + Q  S ++ A+
Sbjct: 62  FEDEEGKRTFWHTSAHLLAEALQELYPQIQFGFGPAVENGFFYDVMPAEGQVISENDFAK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE KM E+  +D P +++ +S  +A + F++  + YK E +E       +T Y QG + D
Sbjct: 122 IEAKMLELAKKDEPVVRKEVSKAEALKEFKADGQTYKCEHIEQDLEDGTITTYTQGNFTD 181

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ STG +K   KL  VAGA+WRGD+ R  ++RIYG ++  ++ L +YL  LEE+
Sbjct: 182 LCRGPHLVSTGVIKAV-KLTSVAGAFWRGDAEREQMTRIYGISFPKKKMLDEYLVMLEEA 240

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQV 299
           +KRDHRK+ +EM+LF  ++  G G+  W  KG ++   L   +R  ++   Y+E+ TP +
Sbjct: 241 KKRDHRKIGKEMELFMFSDRVGKGLPIWLPKGTQLRLRLQKLLRSLLRPYHYQEVITPGI 300

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             + L+  SGH+  Y  + F       T ++   + LKPMNCP H  V+    +SY++LP
Sbjct: 301 GGKSLYVTSGHYAHYGKDAFQ---PIHTPEEDEEYMLKPMNCPHHCEVYARKPRSYKDLP 357

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AEFG+V+R E SG LHGL RVR FTQDDAH+F   +Q+ +E     ++I+ ++K F 
Sbjct: 358 LRIAEFGTVFRYEKSGELHGLTRVRTFTQDDAHIFVRPDQVKSEFETNIDIILKVFKTFH 417

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           F+    ++S R     EK +GSD +W+++EN ++         + + I      GE AFY
Sbjct: 418 FDNYEAQISLRDPKDKEKYIGSDEIWEESENAIREACKEKGLVAHEEI------GEAAFY 471

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDAIGR WQ GTIQVD+NLP+RF   Y    + K  PVMIHRA FGS+ERF 
Sbjct: 472 GPKLDFMVKDAIGRKWQLGTIQVDYNLPARFKLEYTAEDNTKKTPVMIHRAPFGSLERFT 531

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE+  G+ PLWL+P Q  +  I+    +YA+++     +  +    D RNE I  KI
Sbjct: 532 AVLIEHTAGHFPLWLTPDQVAILPISEKYNDYAKQVGQYFDTVGVRSVIDDRNEKIGRKI 591

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGS 626
           R++ +K+IP ++I G+KEA+E  + +R+ G 
Sbjct: 592 RDNELKRIPYMVIVGEKEAAEGLVSMRKQGG 622


>gi|147835149|emb|CAN65674.1| hypothetical protein VITISV_002009 [Vitis vinifera]
          Length = 1260

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 249/566 (43%), Positives = 356/566 (62%), Gaps = 36/566 (6%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           I + T E    L  IRH+CAH+MA AVQ ++P+ +V IGP IE+GFYYDFD E P +  +
Sbjct: 95  IVLPTNESSERLLRIRHTCAHVMAMAVQKLFPDAKVTIGPWIENGFYYDFDME-PLTDKD 153

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L +I+K+M  II R+ P +++ +S ++A+    +  E YK+EIL+SI        +  GE
Sbjct: 154 LKRIKKEMDRIIGRNLPLIREEVSRDEAQRRIMAVNEPYKMEILDSIQEDPITXYHIGGE 213

Query: 179 WFDLCRGPHVRSTGQV--KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           W+DLC GPHV  TG +  +K  +L  VAGAYWRGD  + ML RIYGTAW  +++L  YL+
Sbjct: 214 WWDLCAGPHVEYTGNICNRKAVELESVAGAYWRGDEKKQMLQRIYGTAWENEEQLKAYLH 273

Query: 237 FLEESEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLI--SYMRRKIKDDYEE 293
           F EE+++RDHR+L +++DLF I  E G G++FWH KG  I + +I  S+ +  I+  Y+ 
Sbjct: 274 FKEEAKRRDHRRLGQDLDLFSIQDEAGGGLVFWHPKG-AIVRHIIEDSWKKIHIEHXYDL 332

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           + TP V    LW+ SGH D YR NM++    +D +     + L+PMNCP H+ ++   L 
Sbjct: 333 LYTPHVARADLWKTSGHLDFYRENMYSQITIEDEL-----YQLRPMNCPYHILIYKRKLH 387

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYR+ P+R+AE G+VY  E SGSLHGL RVRGFTQDDAH+FC ++Q+ +E   + +L   
Sbjct: 388 SYRDFPIRVAELGTVYXYELSGSLHGLFRVRGFTQDDAHIFCLEDQIKDEIRGVLDLTEE 447

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           I   FGF K  V LSTRPEK VG+D +W+ A + ++  LD    S   RI+     G GA
Sbjct: 448 ILLQFGFSKYEVNLSTRPEKAVGADDIWEKATSALRDALDDKGWSY--RIDE----GGGA 501

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  ++DA+GR WQC TIQ                 ++K  P+MIHRAV GS+ER
Sbjct: 502 FYGPKIDLKIEDALGRKWQCSTIQ-----------------AKKQRPIMIHRAVLGSLER 544

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           F G++IE++ G+ PLWLSPIQA V  +T + +EY  E+ N LK++ +  E     E +  
Sbjct: 545 FFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVTNKLKANGIRAEV-CHGERLPK 603

Query: 594 KIREHSIKKIPIIIICGDKEASERSI 619
            IR    ++IP++ + G KE   +++
Sbjct: 604 LIRNSEKQRIPLMAVVGPKEVETQTV 629


>gi|157736342|ref|YP_001489025.1| threonyl-tRNA synthetase [Arcobacter butzleri RM4018]
 gi|157698196|gb|ABV66356.1| threonyl-tRNA synthetase [Arcobacter butzleri RM4018]
          Length = 602

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 248/611 (40%), Positives = 382/611 (62%), Gaps = 25/611 (4%)

Query: 39  VAVAINGKVCDL--SDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAI 96
           + +  +G++ DL  ++ +     EI + +   SL ++RHSCAH+MA+A++ ++PE +  +
Sbjct: 4   IGILKDGQIYDLQTAEALNIQGDEIKSDDSKESLDILRHSCAHLMAQAIKELYPEAKFFV 63

Query: 97  GPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEA 156
           GP++++GFYYDF      S DEL  IEKKM+EI  R  P  +   + E+  E F  K + 
Sbjct: 64  GPVVKEGFYYDFKVNSKISDDELPTIEKKMKEIADRKLPITRHETTKEEFYEKF--KNDE 121

Query: 157 YKVEILESIPAKENV-TLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRP 215
            K  +L++I  K++V T+YRQG++ DLCRGPH+ +T  ++ F KL +VAGAY  GD    
Sbjct: 122 LKQAVLKNI--KDDVLTIYRQGDFEDLCRGPHLPNTRMIRSF-KLTRVAGAYLGGDEKNE 178

Query: 216 MLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWK 274
           M++RIYG A+  +Q L  Y   LEE++KRDHRKL  E++LF   +D G+G+  W  KG +
Sbjct: 179 MITRIYGIAFFDKQALFDYTRMLEEAKKRDHRKLGTELELFTFNDDVGAGLPMWLPKGAR 238

Query: 275 IFQTL--ISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           +   L  + Y   +I+  YE +  P++L   +W+ SGH+ +Y+ NM+       T  D +
Sbjct: 239 LRSKLEHLLYKAHRIRG-YEPVRGPEILKAEMWKISGHYANYKENMYF------TTIDDQ 291

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
            + +KPMNC GH+ +F + L SY+ELP +L E+G V+R+E SG++HGL RVR FTQDD+H
Sbjct: 292 EYGIKPMNCVGHIQIFKNNLVSYKELPKKLFEYGVVHRHEMSGAMHGLFRVREFTQDDSH 351

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
           +FCT++Q+     ++   + ++ K F F K  +++ST+PEK +G D  W   E   KG++
Sbjct: 352 IFCTQDQIKQVIFEVLEFVDTLLKVFDF-KYEIEVSTKPEKAIGDDIFW---EKTTKGIM 407

Query: 453 DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
           D +    ++ I+ G+  G GAFYGPK +  + DAIGR WQCGT+QVD NLPSRFN  Y+N
Sbjct: 408 DAL---DENNISYGIDEGGGAFYGPKIDIKILDAIGRKWQCGTVQVDMNLPSRFNVEYIN 464

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIA 572
              EK  PVMIHRA+ GS ERFIGI+ E+  G  P  ++P Q I+  I  S VEYA+E+ 
Sbjct: 465 EKGEKEQPVMIHRAILGSFERFIGILTEHCAGEFPFIIAPTQVILVPIADSHVEYAKELQ 524

Query: 573 NLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
             L  + L  E    NE++N +IR    +++P+I++ GD+E   +++ +R   +     +
Sbjct: 525 KALLENDLDSEIYNMNESLNKRIRMAEKQRVPMIVVIGDEEVENKTVALRNRRTREQSNM 584

Query: 633 SLLDAIPILTK 643
           S  + I +L +
Sbjct: 585 SKNEFISMLNE 595


>gi|325283002|ref|YP_004255543.1| threonyl-tRNA synthetase [Deinococcus proteolyticus MRP]
 gi|324314811|gb|ADY25926.1| threonyl-tRNA synthetase [Deinococcus proteolyticus MRP]
          Length = 650

 Score =  481 bits (1238), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 245/633 (38%), Positives = 375/633 (59%), Gaps = 28/633 (4%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           +++T PDG   + P  AT  DVA  IS  LA  A+A   NG++ DL  P+ EG+ + +IT
Sbjct: 1   MQITLPDGKQLDLPQGATALDVARQISERLAGDAIAATANGELTDLMTPLPEGAQVSLIT 60

Query: 64  PEDP-RSLAVIRHSCAHIMAEAVQSIWP-------EVQVAIGPIIEDGFYYDFDKEQPFS 115
            ++P  + AV RHS  H+M++AV   +        +++  +GP IE+G+Y DFD  +P S
Sbjct: 61  KKNPGDAAAVFRHSLGHVMSQAVGEFYAAKGYSADQLKRGVGPAIENGWYQDFDLPEPLS 120

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            D+L +IE+ M++II R   F ++ +S  +A E F    + YK E++  +P  E VTLY 
Sbjct: 121 EDDLPEIERLMRDIIGRKLDFSRREVSKAEATEFF--AHDPYKAELIRDLPEDEVVTLYM 178

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
           QG++ DLCRGPH  +TG++   FKLM  +GAYWRG+ N P+L RIYG A+ TQ+EL +YL
Sbjct: 179 QGDYTDLCRGPHFPTTGRLPTAFKLMSTSGAYWRGNENNPILQRIYGVAFATQKELDEYL 238

Query: 236 YFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEE 293
           + LEE+++RDHR+L +E+DLF  ++  G G+  W   G  I + L  ++   ++K+ Y+ 
Sbjct: 239 HLLEEAKRRDHRRLGKELDLFFTSDVIGPGLPIWLPSGATIRRELERFIVDVELKNGYQH 298

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           + +P +    L++ SGHWD Y+ +MF +   D          L+PMNCP H+ ++ H   
Sbjct: 299 VYSPALAKSELYKISGHWDHYQEDMFPIMHLDQ-----EELVLRPMNCPHHIQIYAHKPH 353

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYRELP+++AE G++YR E SG L GL RVR  T +DAH+FC  +Q+  E   +  +I  
Sbjct: 354 SYRELPLKIAELGTMYRYEQSGQLTGLSRVRSMTLNDAHIFCRPDQIQEEFKAVVRMIQE 413

Query: 414 IYKDFGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL 469
           +Y+  GF+    +LS R     EK    D +WD AE  ++  L  +       ++     
Sbjct: 414 VYEVLGFKDYSYRLSLRDPQDTEKYYQDDQMWDTAEAQLREALSDLG------VDYYESP 467

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG 529
           G+ AFYGPK +  ++ A+G+D    T Q+DF LP +F+  YV     +  PVMIHR V  
Sbjct: 468 GDAAFYGPKLDVQVRSALGKDETISTAQLDFLLPQKFDLEYVAEDGSRQRPVMIHRGVIS 527

Query: 530 SIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE 589
           ++ER    +IEN  GN P WL+P Q ++  I      YA+E+   L +  L  E D  ++
Sbjct: 528 TMERMTAFLIENTAGNFPFWLAPRQVMIIPIADRHNAYAEELRAELVAAGLRAEVDTSSD 587

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
            +N K+R+  +KKIP+++I GDKE   R++ +R
Sbjct: 588 RMNAKVRDAELKKIPVMLIVGDKEQEARAVSVR 620


>gi|325860506|ref|ZP_08173616.1| threonine--tRNA ligase [Prevotella denticola CRIS 18C-A]
 gi|325481987|gb|EGC85010.1| threonine--tRNA ligase [Prevotella denticola CRIS 18C-A]
          Length = 649

 Score =  481 bits (1238), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 250/639 (39%), Positives = 394/639 (61%), Gaps = 19/639 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           +K+TFPDGS++ +    TG  +AESIS +LA+  V+  +NG   +L+ P+  + +I +  
Sbjct: 2   VKITFPDGSVREYEQGVTGYQIAESISPALARDVVSCGVNGVTTELNRPINGDATIALYK 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF--DKEQPFSSDELAQ 121
            +D        H+ AH++AEA+Q ++P +Q   GP +E+GF+YD      Q  S ++  +
Sbjct: 62  FDDEEGKHTFWHTSAHLLAEALQELYPGIQFGFGPAVENGFFYDVMPAAGQTISENDFPR 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE+KM+E+  ++ P ++  +S   A + F +  + YKVE +E       ++ Y QG + D
Sbjct: 122 IEEKMRELARKNEPVVRHDVSKADAIKEFTADGQEYKVEHIEQDLEDGTISTYTQGHFTD 181

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ STG +K   K+  VAGA+WRGD+ R  ++RIYG  +  ++ L +YL  LEE+
Sbjct: 182 LCRGPHLVSTGAIKAI-KITSVAGAFWRGDAKREQMTRIYGITFPKKKMLDEYLVMLEEA 240

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQV 299
           +KRDHRK+ +EM+LF  ++  G G+  W  KG ++   L   +RR ++  +Y+E+ TP +
Sbjct: 241 KKRDHRKIGKEMELFMFSDRVGKGLPIWLPKGTQLRLRLQDLLRRLLRPYNYQEVITPGI 300

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             ++L+  SGH+  Y  + F       T ++   + LKPMNCP H  V+ +  +SY++LP
Sbjct: 301 GGKNLYVTSGHYAHYGKDSFQ---PIHTPEEDEEYMLKPMNCPHHCEVYAYKPRSYKDLP 357

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AEFG+V+R E SG LHGL RVR FTQDDAH+F   EQ+  E     ++I+ ++K FG
Sbjct: 358 LRIAEFGTVFRYEKSGELHGLTRVRTFTQDDAHIFVRPEQVKTEFETNIDIILKVFKTFG 417

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           F+    ++S R     EK +GSD +W+++E  +K      +   +  +   V LGE AFY
Sbjct: 418 FDNYEAQISLRDPNDKEKYIGSDEVWEESEAAIK------QACEEKGLKARVELGEAAFY 471

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDAIGR WQ GTIQVD+NLP+RF   Y    + K  PVMIHRA FGS+ERF 
Sbjct: 472 GPKLDFMVKDAIGRRWQLGTIQVDYNLPNRFKLEYTAEDNSKKTPVMIHRAPFGSLERFT 531

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE+  G+ PLWL+P Q  +  I+    +YA ++   L +H +    D RNE I  KI
Sbjct: 532 AVLIEHTAGHFPLWLTPDQVAILPISEKYNDYAFKVKAYLDAHDVRSIMDDRNEKIGRKI 591

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           R++ +K++P ++I G+KEA+E  + +R+ G      +++
Sbjct: 592 RDNELKRVPYMVIVGEKEAAEGLVSMRQQGGGEQATMTM 630


>gi|302346317|ref|YP_003814615.1| threonine--tRNA ligase [Prevotella melaninogenica ATCC 25845]
 gi|302150675|gb|ADK96936.1| threonine--tRNA ligase [Prevotella melaninogenica ATCC 25845]
          Length = 649

 Score =  481 bits (1237), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 247/639 (38%), Positives = 397/639 (62%), Gaps = 19/639 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           +K+TFPDGS++ +    TG  +AESIS +LA+  V+  +NG+  +L+ P+ E  +I +  
Sbjct: 2   VKITFPDGSVREYEQGVTGFQIAESISPALARDVVSCGVNGETTELNRPINEDATIALYK 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF--DKEQPFSSDELAQ 121
            +D        H+ AH++AEA+Q ++P +Q   GP +E+GF+YD    + Q  S ++  +
Sbjct: 62  FDDEEGKHTFWHTSAHLLAEALQELYPGIQFGFGPAVENGFFYDVMPAEGQTISENDFPK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE+KM+E+  ++   +++ +S   A + F +  + YKVE +        ++ Y QG + D
Sbjct: 122 IEEKMRELAKKNEQVVRRDVSKADAVKEFTADGQEYKVEHIVEDLEDGTISTYSQGNFTD 181

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ STG +K   K+  VAGA+WRGD+ R  ++RIYG  +  ++ L +YL  LEE+
Sbjct: 182 LCRGPHLVSTGAIKAV-KITSVAGAFWRGDAKREQMTRIYGITFPKKKMLDEYLEMLEEA 240

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQV 299
           +KRDHRK+ +EM+LF  ++  G G+  W  KG ++   L   +RR ++  +Y+E+ TP +
Sbjct: 241 KKRDHRKIGKEMELFMFSDRVGKGLPIWLPKGTQLRLRLQELLRRLLRPYNYQEVITPGI 300

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             ++L+  SGH+  Y  + F       T ++   + LKPMNCP H  ++ H  +SY++LP
Sbjct: 301 GGKNLYVTSGHYAHYGKDAFQ---PIHTPEEDEEYMLKPMNCPHHCEIYAHKPRSYKDLP 357

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AEFG+V+R E SG LHGL RVR FTQDDAH+F   +Q+  E     ++I+ ++K FG
Sbjct: 358 LRIAEFGTVFRYEKSGELHGLTRVRTFTQDDAHIFVRPDQVKAEFENNIDIILKVFKTFG 417

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           F+    ++S R     EK +GSD +W+++E  +K      +  ++  +N  V LGE AFY
Sbjct: 418 FDNYEAQISLRDPEDKEKYIGSDEVWEESEAAIK------EACAEKGLNARVELGEAAFY 471

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDAIGR WQ GTIQVD+NLP+RF   Y    + K  PVM+HRA FGS+ERF 
Sbjct: 472 GPKLDFMVKDAIGRRWQLGTIQVDYNLPNRFKLEYTAEDNSKKTPVMVHRAPFGSLERFT 531

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE+  G+ PLWL+P Q  +  I+    +YA+++     +H +    D RNE I  KI
Sbjct: 532 AVLIEHTAGHFPLWLTPDQVAILPISEKYNDYARKVKAYFDAHDVRSIMDDRNEKIGRKI 591

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           R++ +K++P ++I G+KEA+E  + +R+ G      +++
Sbjct: 592 RDNELKRVPYMVIVGEKEAAEGLVSMRQQGGGEQATMTM 630


>gi|319935875|ref|ZP_08010301.1| threonyl-tRNA synthetase [Coprobacillus sp. 29_1]
 gi|319809142|gb|EFW05623.1| threonyl-tRNA synthetase [Coprobacillus sp. 29_1]
          Length = 581

 Score =  481 bits (1237), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 245/580 (42%), Positives = 370/580 (63%), Gaps = 21/580 (3%)

Query: 69  SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE-LAQIEKKMQ 127
            L ++ HSCAH++A+A+Q ++P  +  +GP++ +GFYYD D       DE +  IEK+M+
Sbjct: 13  QLNMLNHSCAHVLAQAIQHLYPNAKFWVGPVVSEGFYYDIDLGDKVIKDEDIPAIEKEMK 72

Query: 128 EIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPH 187
           +I       +++  S  +A E+F  K + YK++++  +    ++T YRQG++ DLCRGPH
Sbjct: 73  KICKDGKRIIREEHSKAEAMEMF--KDDPYKLDLISGL-EDGHITCYRQGDFVDLCRGPH 129

Query: 188 VRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHR 247
           V +    K F KL+K +GAYW+GD +  +L RIYG  + T +EL  YL FLEE++KRDH+
Sbjct: 130 VETVKMCKNF-KLLKHSGAYWKGDKDNKVLQRIYGVCFPTPEELQAYLDFLEEAKKRDHK 188

Query: 248 KLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQVLDQHLWQ 306
           KL RE+DLF ++E   G+ F+   G  +   L  +      K+ YE I TP ++ + LW+
Sbjct: 189 KLGRELDLFMMSEYAPGMPFFLPHGMLLRNELEKFWYDEHTKEGYEFIKTPIMMSKELWE 248

Query: 307 QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFG 366
            SGHW +Y+ NM+       ++ D R FA+KPMNCPG + V+ +GL SY++LP+R+ E G
Sbjct: 249 VSGHWYNYKENMYT------SLVDEREFAIKPMNCPGSLLVYKNGLHSYKDLPIRMGELG 302

Query: 367 SVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK 426
            V+R+E SG+L+GL RVR FTQDDAH+F T +Q+ +E +++   I  +Y   G     ++
Sbjct: 303 QVHRHEASGALNGLFRVRTFTQDDAHIFMTPDQIESEVVRLIAFIDRVYSMLGL-SYDIE 361

Query: 427 LSTRPE-KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKD 485
           LSTRPE K +G   +W+ +E  +             +IN G    +GAFYGPK ++ +KD
Sbjct: 362 LSTRPEEKYIGELEIWEKSEAALAAA--CQAAGKDYKINPG----DGAFYGPKLDFHVKD 415

Query: 486 AIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           ++GR WQCGTIQ+D NLP RF+  YV+ + EK  PVM+HR +FGSIERFIGI+IE+F G 
Sbjct: 416 SLGRVWQCGTIQLDMNLPERFDLTYVDQNGEKVRPVMVHRVIFGSIERFIGILIEHFAGA 475

Query: 546 LPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
            PLWL+P Q  V  + +   ++Y+QEI  LL++  + +E D R E + Y+IRE  +KKIP
Sbjct: 476 FPLWLAPAQVKVIPVKNEYHLDYSQEIFKLLEAKGIRVEIDDREEKLGYRIREAQMKKIP 535

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
             ++ GDKE  ER++  R++G      VSL + I ++ K+
Sbjct: 536 YQLVLGDKERDERTVTYRQYGEQKQTTVSLDEFICMILKQ 575


>gi|170290551|ref|YP_001737367.1| threonyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum OPF8]
 gi|170174631|gb|ACB07684.1| threonyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum OPF8]
          Length = 638

 Score =  481 bits (1237), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 256/657 (38%), Positives = 398/657 (60%), Gaps = 30/657 (4%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE--GSIEII 62
           +K+  PDG+  N      G  + + I R +   A A   +G++ DLS  + +  G I ++
Sbjct: 2   VKVIMPDGTTLN---AEEGKRILDVIPRGIGLIAEA---SGRLLDLSTVISDDLGEIRVL 55

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
                       H+ +HI+A+AV+ ++ E ++ IGP IE+GFYY+FD   + FS ++L  
Sbjct: 56  DFNSREGREAYWHTTSHILAQAVKRLFKEAKLGIGPPIEEGFYYEFDLGGKTFSQEDLEL 115

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE++M+ I+  D   +++ +  E+A  LF    E YKVE+LE I  +  V++YRQGE+FD
Sbjct: 116 IEEEMRRIVEEDIEIVREEMRREEAIALFREAGEPYKVELLEEI-EEPVVSIYRQGEFFD 174

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ STG VK + KL++V+ +YWRGD   P++ R+YG ++ +++ L ++L   EE 
Sbjct: 175 LCRGPHLPSTGYVK-YMKLLQVSSSYWRGDERNPVMQRVYGISFPSKEMLEEFLVRREEI 233

Query: 242 EKRDHRKLAREMDLFHIAED--GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
            KRDHR +  ++DLF +  +  G G+I WH KG ++ + +  ++ R  +   YE + +P 
Sbjct: 234 RKRDHRVVGPQLDLFSMPSEIIGPGLILWHPKGARVRRIIEDFLVRVHLSRGYELVYSPH 293

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW+ SGH + YR  M+  +      K+    A+KPMNCP H+ ++N   +SYREL
Sbjct: 294 IAYSTLWKISGHLNYYRDYMYVFE------KEGIEHAVKPMNCPFHILIYNSKRRSYREL 347

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RL E G+VYR E SG LHGL+R RGFTQDDAH+F T+E + +E L + +L   + + F
Sbjct: 348 PLRLFELGTVYRFEKSGVLHGLLRARGFTQDDAHIFTTREDLEDEVLGLIDLNEYLMRSF 407

Query: 419 GFEKIMVKLST-RPEKR---VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           GFE++ V++ST  P +R   +GSD  W  A++ ++G L       +      ++ GE AF
Sbjct: 408 GFEELKVEISTWDPRRRSEYMGSDEDWSAAQSSLEGAL------RRKGYRYEIMEGEAAF 461

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  L D+IGR+WQ  TIQ+DFNLP RF+  YV +   + H VMIHRA+ GSIERF
Sbjct: 462 YGPKIDMKLVDSIGREWQLSTIQIDFNLPRRFDLKYVKADGSEEHIVMIHRALLGSIERF 521

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
            GI++E++ GN PLW++PIQ  +  ++ +    A+E+  L+ +  +  +      T++Y+
Sbjct: 522 FGILLEHYAGNFPLWIAPIQLRILPVSQAQEGRAEELLALMSARGVRADIRKAESTLSYR 581

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           IRE  ++KIPI+ I G++E     I +R  G      +SL D      KE LPPD +
Sbjct: 582 IRESELEKIPIVAIIGEREMKTGEISVRVKGKGNLGSMSLEDFFRTFGKELLPPDMR 638


>gi|224373363|ref|YP_002607735.1| threonyl-tRNA synthetase [Nautilia profundicola AmH]
 gi|254783530|sp|B9L5U7|SYT_NAUPA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|223589770|gb|ACM93506.1| threonyl-tRNA synthetase [Nautilia profundicola AmH]
          Length = 611

 Score =  481 bits (1237), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 250/595 (42%), Positives = 373/595 (62%), Gaps = 17/595 (2%)

Query: 34  LAKKAVAVAINGKVCDLSDPVR---EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWP 90
           + +  +A+ I+ K+ DL        EG   +     P +L VIRHS AH+MA+A++ ++P
Sbjct: 1   MQQDVIALKIDDKIIDLQTAEAQGIEGGEPVYFDNSPEALEVIRHSAAHLMAQAIKELYP 60

Query: 91  EVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELF 150
           E +  +GP IE+GFYYD   E P +  +L  IEKKM+ +  +     +  +S E+ARE F
Sbjct: 61  EAKFYVGPTIENGFYYDLKTETPITDKDLKNIEKKMKALAKKKFDITRYEISMEEAREKF 120

Query: 151 ESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRG 210
             K +  K  +L+ IP  + V++Y+QG++ DLCRGPHV +T  +    KL KVAGAY  G
Sbjct: 121 --KNDELKQAVLDMIPG-DTVSIYKQGDFEDLCRGPHVPNTKYLHNV-KLQKVAGAYLGG 176

Query: 211 DSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWH 269
           DS   ML+R+YGTA+ T++ L +YL  LEE+ KRDHRKL  E++L+   E+ G+G+  W 
Sbjct: 177 DSKNEMLTRVYGTAFATKEALQEYLKMLEEAAKRDHRKLGTELELWMFDEEVGAGMPIWL 236

Query: 270 RKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCA-DDT 327
             G  +   L   +    I+ +Y  +  P++L  H+W+ SGH+ +Y+ NM+  +   DD 
Sbjct: 237 PNGALLRGNLEKLLYSAHIRREYLPVRGPELLRSHMWKISGHYYNYKENMYFTEIENDDP 296

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
            K    + +KPMNC  HV +F H ++SY+ELP+RL EFG+V+R+E SG LHGL+RVR FT
Sbjct: 297 EKPADEYGIKPMNCLAHVKIFGHKVRSYKELPLRLFEFGTVHRHEKSGVLHGLLRVREFT 356

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENI 447
           QDDAH+FC  +Q+  E +K+   + SI + FGF   M ++STRPEK +GSD +W+ A   
Sbjct: 357 QDDAHIFCRPDQIEEEVIKVLEFVDSIMERFGFNYEM-EISTRPEKSIGSDEIWEKATES 415

Query: 448 MKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFN 507
           +K  L+++          G+  G GAFYGPK +  + DAIGR WQCGTIQVDFNLP RF+
Sbjct: 416 LKKALNSLNRE------YGIDEGGGAFYGPKIDIKITDAIGRKWQCGTIQVDFNLPERFD 469

Query: 508 AFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEY 567
             YV+ ++E+  PVMIHRA+ GS ERFI I+ E++ G  P +++PI+AI   I  S VEY
Sbjct: 470 ITYVDENNERVRPVMIHRAIIGSFERFIAILTEHYAGEFPTFIAPIKAIFVPIAESHVEY 529

Query: 568 AQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           A+++   L    ++ E    N+++N +IR    +++  ++I GD+E    ++ IR
Sbjct: 530 AKKLQKELLEADINTEIFASNDSLNKRIRNAEKRRVGYVVIIGDEEVETGTVAIR 584


>gi|256819829|ref|YP_003141108.1| threonyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271]
 gi|256581412|gb|ACU92547.1| threonyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271]
          Length = 647

 Score =  481 bits (1237), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 258/638 (40%), Positives = 388/638 (60%), Gaps = 20/638 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           IK+T PDGS+K +    T +++A SIS  LA+  ++ + NGK  +   P+  +GS+ + T
Sbjct: 2   IKITLPDGSVKEYQSGITPAEIAASISEGLARNVLSASFNGKTIETVTPLTTDGSLTLYT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQI 122
            + P       HS AHI+A+A++ ++P +++ IGP I +GFYYD D   +P S  +   I
Sbjct: 62  WDSPEGKKAFWHSSAHILAQALEELYPGIKLTIGPAIANGFYYDVDFNGKPISEKDFPAI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E K  EI     PF  + +S  +A   +  K E YK E++E++     +T      + DL
Sbjct: 122 EAKFLEIARGKHPFKMRPVSKAEALSYYAGKNE-YKTELIEAL-EDGTITFCDHSTFTDL 179

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRG H+ +TG VK   K++  AGAYWRGD + P L+R+Y  ++  Q+ELT+YL  LEE++
Sbjct: 180 CRGGHIPNTGFVKAV-KVLSAAGAYWRGDEHNPQLTRVYAISFPKQKELTEYLELLEEAK 238

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
           KRDHRKL +E++LF  +   G G+  W  KG  + + L +++R+  K   YE++ TP + 
Sbjct: 239 KRDHRKLGKELELFTFSNKVGQGLPLWLPKGAALRERLEAFLRKAQKQAGYEQVVTPHIG 298

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            ++L+  SGHWD Y  + F       T  +   + LKPMNCP H  ++N    SY++LP 
Sbjct: 299 HKNLYVTSGHWDKYGKDSFQPIA---TPNEGEEYLLKPMNCPHHCEIYNSHPWSYKDLPK 355

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R AEFG+VYR E SG LHGL RVR FTQDDAH+FCT EQ+ +E   + +L++ ++   GF
Sbjct: 356 RFAEFGTVYRYEQSGELHGLTRVRCFTQDDAHIFCTPEQLDDEFKHVIDLVLYVFGSLGF 415

Query: 421 EKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           +    ++S R    P K +GSD  W  AEN +      I  + +  ++  +  GE AFYG
Sbjct: 416 DNFTAQVSLRDPENPTKYIGSDENWAKAENAI------INAAKEKGLSYVIETGEAAFYG 469

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK ++++KDA+GR WQ GTIQVD+NLP RF+ +Y  + +E   PVMIHRA FGS+ERF+ 
Sbjct: 470 PKLDFMVKDALGRSWQLGTIQVDYNLPERFDLWYKGADNEMHRPVMIHRAPFGSMERFVA 529

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           I++E+  GN PLWL+P QAIV +++     YAQ++  LL++  +    D R ET+  KIR
Sbjct: 530 ILLEHTAGNFPLWLNPSQAIVLSLSEKYENYAQKVLRLLENSDIRTLIDNRAETMGKKIR 589

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           E   +KIP ++I G+ E  E ++ +R+ G      +S+
Sbjct: 590 EAETQKIPYMLIVGENEEKEGTVSVRKRGGEDLGSMSV 627


>gi|213963363|ref|ZP_03391619.1| threonyl-tRNA synthetase [Capnocytophaga sputigena Capno]
 gi|213954031|gb|EEB65357.1| threonyl-tRNA synthetase [Capnocytophaga sputigena Capno]
          Length = 647

 Score =  481 bits (1237), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 260/638 (40%), Positives = 391/638 (61%), Gaps = 20/638 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           IK+T PDGS+K +    T + VA+SIS  LA+  ++ + NGK  +   P+  +GS+ + T
Sbjct: 2   IKITLPDGSVKEYQSGITPAQVAQSISEGLARNVLSASFNGKTVESVTPLTTDGSLTLYT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQI 122
            ++P       HS AHI+A+A++ ++P +++ IGP I +GFYYD D   +P S  +   I
Sbjct: 62  WDNPEGKKAFWHSSAHILAQALEELYPGIKLTIGPAIANGFYYDVDFNGKPISEKDFPAI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E K  EI      F  + +S  +A   +  K E YK E++E++     +T      + DL
Sbjct: 122 EAKFLEIARGKHEFKMRPVSKAEALSYYAGKNE-YKTELIEAL-EDGTITFCDHSTFTDL 179

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRG H+ +TG VK   K++  AGAYWRGD + P L+R+YG ++  Q+ELT+YL  LEE++
Sbjct: 180 CRGGHIPNTGFVKAV-KVLSAAGAYWRGDEHNPQLTRVYGISFPKQKELTEYLELLEEAK 238

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
           KRDHRKL +E++LF  +   G G+  W  KG  + + L +++R+  K   YE++ TP + 
Sbjct: 239 KRDHRKLGKELELFTFSNKVGQGLPLWLPKGAALRERLEAFLRKAQKQAGYEQVVTPHIG 298

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            ++L+  SGHWD Y  + F       T  +   + LKPMNCP H  ++N    SY++LP 
Sbjct: 299 HKNLYVTSGHWDKYGKDSFQPIA---TPNEGEEYLLKPMNCPHHCEIYNSHPWSYKDLPK 355

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R AEFG+VYR E SG LHGL RVR FTQDDAH+FCT EQ+ +E   + +L++ ++   GF
Sbjct: 356 RFAEFGTVYRYEQSGELHGLTRVRCFTQDDAHIFCTPEQLDDEFKHVIDLVLYVFGSLGF 415

Query: 421 EKIMVKLSTR-PE---KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           +    ++S R PE   K +GSD  W  AEN +      I  + +  +N  +  GE AFYG
Sbjct: 416 DNFTAQVSLRDPENLSKYIGSDENWAKAENAI------INAAKEKGLNYVIETGEAAFYG 469

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK ++++KDA+GR WQ GTIQVD+NLP RF+ +Y  + +E   PVMIHRA FGS+ERF+ 
Sbjct: 470 PKLDFMVKDALGRSWQLGTIQVDYNLPERFDLWYKGADNEMHRPVMIHRAPFGSMERFVA 529

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           I++E+  GN PLWL+P QAI+ +++     YAQ++ +LL++  +    D R ET+  KIR
Sbjct: 530 ILLEHTAGNFPLWLNPNQAIILSLSEKYENYAQKVLSLLENSDIRTLIDNRAETMGKKIR 589

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           E   +KIP ++I G+ E  E ++ +R+ G      +S+
Sbjct: 590 EAETQKIPYMLIVGENEEKEGTVSVRKRGGEDLGSMSV 627


>gi|315655426|ref|ZP_07908326.1| threonine--tRNA ligase [Mobiluncus curtisii ATCC 51333]
 gi|315490366|gb|EFU79991.1| threonine--tRNA ligase [Mobiluncus curtisii ATCC 51333]
          Length = 669

 Score =  480 bits (1236), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 265/673 (39%), Positives = 389/673 (57%), Gaps = 55/673 (8%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           S+I +T  DG         TG D+         K+ +A  ING+  DL   + +G ++E 
Sbjct: 2   SEINVTI-DGKATQIESTITGEDLYRD-----RKEVIAYFINGQPRDLYRELHDGDTVEA 55

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           IT +    L ++RHSC H+MA+AV+ + P V+  IGP IE+GFYYDF  ++PF+ ++L  
Sbjct: 56  ITIDSEMGLNILRHSCTHVMAQAVKQVRPNVKYGIGPFIENGFYYDFGVDEPFTPEDLKA 115

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL---------------ESIP 166
           IEK M  I   D  F+++ ++ E+ R   E   + YK+E++                S+ 
Sbjct: 116 IEKYMARICKEDQKFVRRVVTEEEGRA--ELADQPYKLELIGLKGTDSDNDQAAAGASVE 173

Query: 167 AKEN-VTLY----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSR 219
              N +T+Y    + GE  W DLCRGPHV ST  +   FKLMKV+ AYWRGD     L R
Sbjct: 174 VGGNELTIYDNVRKNGEVAWKDLCRGPHVPSTRLLNGVFKLMKVSAAYWRGDQANDSLQR 233

Query: 220 IYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQT 278
           IYGTAW T+ +L +Y+  +EE+ KRDHR+L  E+DLF   E+ GSG+  +H KG  +   
Sbjct: 234 IYGTAWATKDDLKEYVTRMEEAAKRDHRRLGNELDLFSFPEEIGSGLAVFHPKGAMVRME 293

Query: 279 LISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV-----KCAD--DTIKD 330
           + +Y RR+ +++ Y  + TP V    L++ SGH + Y+  MF       +C D  +  K+
Sbjct: 294 MENYSRRRHLEEGYSFVYTPHVTKGQLFETSGHLEWYKDGMFPPMRVDEECDDQGNVTKE 353

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
              + LKPMNCP H  ++    +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDD
Sbjct: 354 GFDYYLKPMNCPMHNLIYKSRSRSYRELPLRLFEFGTVYRYEKSGVVHGLTRGRGFTQDD 413

Query: 391 AHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR-PEKRVGSDALWDDAENIMK 449
           +H++CT+EQM +E  K+   ++ + KD+G +   ++LST+ P K VGSD +W++A N + 
Sbjct: 414 SHIYCTREQMKDELTKLLTFVLDLLKDYGLDDFYLELSTKNPHKFVGSDEIWEEATNTLA 473

Query: 450 GVLDTIKNSSQDRINTGVLL---GEGA-FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSR 505
            V             +G+ L    EGA FYGPK     +DAIGR WQ  TIQ+DFNLP R
Sbjct: 474 EVATA----------SGLELVPDPEGAAFYGPKISVQARDAIGRTWQMSTIQLDFNLPER 523

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAV 565
           F+  Y  +   +  PVMIHRA+FGSIERF G++ E++ G  P WL+P+Q  +  +  +  
Sbjct: 524 FDLEYTAADGSRQRPVMIHRALFGSIERFFGVLTEHYAGAFPAWLAPVQVRLVPVAETFN 583

Query: 566 EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
           +Y  +IAN L++ ++ +E D  ++    KIR  +  KIP  +I G ++A   ++  R  G
Sbjct: 584 DYCDDIANRLRAENVRVEVDTTDDRFGKKIRNAAKDKIPFTLIAGGEDAEANAVSFRYRG 643

Query: 626 STTTQKVSLLDAI 638
                 V +  AI
Sbjct: 644 GEQKNGVPIDQAI 656


>gi|315635477|ref|ZP_07890743.1| threonine--tRNA ligase [Arcobacter butzleri JV22]
 gi|315480235|gb|EFU70902.1| threonine--tRNA ligase [Arcobacter butzleri JV22]
          Length = 602

 Score =  480 bits (1236), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 248/611 (40%), Positives = 381/611 (62%), Gaps = 25/611 (4%)

Query: 39  VAVAINGKVCDL--SDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAI 96
           + +  +G++ DL  ++ +     EI + +   SL ++RHSCAH+MA+A++ ++PE +  +
Sbjct: 4   IGILKDGQIYDLQTAEALNIQGDEIKSDDSKESLDILRHSCAHLMAQAIKELYPEAKFFV 63

Query: 97  GPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEA 156
           GP++++GFYYDF      S DEL  IEKKM+EI  R  P  +   + E+  E F  K + 
Sbjct: 64  GPVVKEGFYYDFKVNSKISDDELPTIEKKMKEIADRKLPITRHETTKEEFYEKF--KNDE 121

Query: 157 YKVEILESIPAKENV-TLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRP 215
            K  +L++I  K++V T+YRQG++ DLCRGPH+ +T  ++ F KL +VAGAY  GD    
Sbjct: 122 LKQAVLKNI--KDDVLTIYRQGDFEDLCRGPHLPNTRMIRSF-KLTRVAGAYLGGDEKNE 178

Query: 216 MLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWK 274
           M++RIYG A+  +Q L  Y   LEE++KRDHRKL  E++LF   +D G+G+  W  KG +
Sbjct: 179 MITRIYGIAFFDKQALFDYTRMLEEAKKRDHRKLGTELELFTFNDDVGAGLPMWLPKGAR 238

Query: 275 IFQTL--ISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           +   L  + Y   +I+  YE +  P++L   +W+ SGH+ +Y+ NM+       T  D +
Sbjct: 239 LRSKLEHLLYKAHRIRG-YEPVRGPEILKAEMWKISGHYANYKENMYF------TTIDDQ 291

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
            + +KPMNC GH+ +F + L SY+ELP +L E+G V+R+E SG++HGL RVR FTQDD+H
Sbjct: 292 EYGIKPMNCVGHIQIFKNNLVSYKELPKKLFEYGVVHRHEMSGAMHGLFRVREFTQDDSH 351

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
           +FCT++Q+     ++   + ++ K F F K  +++ST+PEK +G D  W   E   KG++
Sbjct: 352 IFCTQDQIKQVIFEVLEFVDTLLKVFDF-KYEIEVSTKPEKAIGDDIFW---EKTTKGIM 407

Query: 453 DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
           D +    ++ I+ G+  G GAFYGPK +  + DAIGR WQCGT+QVD NLPSRFN  Y+N
Sbjct: 408 DAL---DENNISYGIDEGGGAFYGPKIDIKILDAIGRKWQCGTVQVDMNLPSRFNVEYIN 464

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIA 572
              EK  PVMIHRA+ GS ERFIGI+ E+  G  P  ++P Q I   I  S VEYA+E+ 
Sbjct: 465 EKGEKEQPVMIHRAILGSFERFIGILTEHCAGEFPFIIAPTQVIFVPIADSHVEYAKELQ 524

Query: 573 NLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
             L  + L  E    NE++N +IR    +++P+I++ GD+E   +++ +R   +     +
Sbjct: 525 KALLENDLDSEIYNMNESLNKRIRMAEKQRVPMIVVIGDEEVENKTVALRNRRTREQSNM 584

Query: 633 SLLDAIPILTK 643
           S  + I +L +
Sbjct: 585 SKNEFISMLNE 595


>gi|86607055|ref|YP_475818.1| threonyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
 gi|86555597|gb|ABD00555.1| threonyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
          Length = 603

 Score =  480 bits (1236), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 244/593 (41%), Positives = 368/593 (62%), Gaps = 22/593 (3%)

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T E P+ L  IRH+ +H++A AVQ ++P+ QV IGP  + GFYYDFD  +PF+ ++L +I
Sbjct: 20  THESPK-LERIRHTTSHVLAMAVQRLFPKAQVTIGPTTDYGFYYDFDHPEPFTPEDLERI 78

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG-EWFD 181
           +K+MQ II +  P +++ +S E+AR   E+  E YK+EIL+SIP  E +T+Y  G EW+D
Sbjct: 79  KKEMQAIIKKGLPVIREEVSREEARRRIEALGEPYKLEILDSIPEGEPITIYHLGDEWWD 138

Query: 182 LCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           LC GPHV +T ++  K F L+ VAGAYWRGD  +P L RIYGTAW T +EL +Y   LEE
Sbjct: 139 LCAGPHVENTKEINPKAFDLLSVAGAYWRGDETKPQLQRIYGTAWETPEELKEYKRRLEE 198

Query: 241 SEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           +++RDHRKL +E+ LF  A++ G G+  W  KG  +   L  ++++ ++K  Y  + TP 
Sbjct: 199 AKRRDHRKLGKELGLFIFADEVGPGLPLWTPKGTTLRWVLEDFLKQEQLKRGYLPVVTPH 258

Query: 299 VLDQHLWQQSGHWDSYRANMFAV-KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           +    L++ SGHW  YR +MF +   +++     + F +KPMNCP H+ ++   L+SYR+
Sbjct: 259 IARVDLFKISGHWQKYREDMFPMMAESEEARAAEQGFVMKPMNCPFHIQIYKSELRSYRD 318

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R AEFG+VYR E SG L GL RVRGFT DDAH+F   +Q+  E LK+ +LI+ ++  
Sbjct: 319 LPLRYAEFGTVYRYEQSGELGGLTRVRGFTVDDAHLFVRPDQLEEEFLKVVDLILVVFDK 378

Query: 418 FGFEKIMVKLSTR---PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
              +    +LS R    +K +GS   WD AEN ++  ++ +     + I      GE AF
Sbjct: 379 LKLKDFRARLSFRDPKSDKYLGSPEEWDMAENAIRRAVEKLSMPHFEGI------GEAAF 432

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK ++I +DA+ R+WQ GT+QVD+  P RF+ +YV     +  PVMIHRA FGS+ER 
Sbjct: 433 YGPKLDFIFRDALDREWQLGTVQVDYQNPQRFDLYYVAEDGSRQRPVMIHRAPFGSLERL 492

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
           IGI+IE + G+ P WL+P Q  +  ++   + YA ++ + L+   + +  D  ++ +  K
Sbjct: 493 IGILIEEYAGDFPFWLAPEQVRILPVSDQYLGYATQVRDQLREQGIRVHIDADSDRLPKK 552

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRR-----FGSTTTQKVSLLDAIPILT 642
           IR     K+P ++I G+KE +  ++ +R+      GS T      LD +  L 
Sbjct: 553 IRNAEKAKVPFMLIVGEKEQATGTVSVRQRHGKDLGSLTV--ADFLDQVQALN 603


>gi|159899369|ref|YP_001545616.1| threonyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
 gi|159892408|gb|ABX05488.1| threonyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
          Length = 604

 Score =  480 bits (1235), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 242/591 (40%), Positives = 361/591 (61%), Gaps = 30/591 (5%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L  +RHS AH++A+AV  I+PE ++AIGP +E+GFYYDFD  +P + D+L  IE K
Sbjct: 7   DNDPLYRLRHSTAHVLAQAVLEIFPEGKIAIGPPVENGFYYDFDLPRPLTPDDLKDIEAK 66

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN------------VTL 173
           M++II     F  + +S ++ARELF  K + YK+E++  +   E+            ++ 
Sbjct: 67  MRKIIKAKHRFAYREVSADEARELF--KNQPYKLELIAGLAKGEDEYGEKAAASDTIIST 124

Query: 174 YRQGEWFDLCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELT 232
           Y+   + DLC+GPHV S G +    FKL++V+GAYWRGD  RPML RIYGT W +++EL 
Sbjct: 125 YKHDSFEDLCKGPHVESLGDIPPNGFKLLRVSGAYWRGDEKRPMLQRIYGTVWPSKEELD 184

Query: 233 QYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDD 290
            YL+  EE++KRDHRKL RE+ LF  ++  G+G+  W  KG  +   L  ++R+ +I+  
Sbjct: 185 HYLWQQEEAKKRDHRKLGRELGLFTFSQKVGAGLALWLPKGAILRDVLERFLRQAQIERG 244

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFA----VKCADDTIKDLRTFALKPMNCPGHVA 346
           Y  + TP +    L++ SGHW +YR  +F     ++  D    +   + LKPMNCP H+ 
Sbjct: 245 YLPVVTPHMGKIDLYKTSGHWYTYRDGIFPPMREIENDDTENPEGEIYLLKPMNCPHHIE 304

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           ++    +SYR+LP+RLAEFG+VYR E SG L GL+RVR FT DD+H+F T +Q+  E LK
Sbjct: 305 IYASEPRSYRDLPLRLAEFGTVYRYEHSGELTGLLRVRSFTVDDSHLFVTPDQLEAEFLK 364

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRP---EKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
           + +LI+ ++   G +    ++  R     K +GSD +W+ A+N +      I  + +  +
Sbjct: 365 VVDLILFVFGTMGLKDFQARVGLREVGNPKYIGSDEVWEKAQNAI------INAAEKKGL 418

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
           N  V+ GE AFYGPK ++I +D +GR WQ GT+QVD+NLP RF   Y     +K  P+MI
Sbjct: 419 NYIVVEGEAAFYGPKLDFIFRDVLGRQWQLGTVQVDYNLPERFEIEYTGEDGQKHRPIMI 478

Query: 524 HRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIE 583
           HRA FGSIERF+G +IE + G  P+WL+P+Q  +  IT   V YA+ +A  L +  L +E
Sbjct: 479 HRAPFGSIERFVGTLIEQYAGAFPVWLAPVQVTLVPITDRHVAYAESVAAKLNAQGLRVE 538

Query: 584 TDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
            D  N  +N KIR+    KIP +++ GDKE    ++ +R+        +S+
Sbjct: 539 VDASNNRMNAKIRDAQKLKIPYMLVVGDKEEEAGAVAVRQRSGGDLGSISV 589


>gi|91215264|ref|ZP_01252236.1| threonyl-tRNA synthetase [Psychroflexus torquis ATCC 700755]
 gi|91186869|gb|EAS73240.1| threonyl-tRNA synthetase [Psychroflexus torquis ATCC 700755]
          Length = 648

 Score =  480 bits (1235), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 262/649 (40%), Positives = 389/649 (59%), Gaps = 21/649 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           I +T PDGS+K F   +T  +VA SIS  LA+  ++   N  V +   P+ E G++ ++T
Sbjct: 2   INITLPDGSVKQFDKGSTPMNVAFSISAGLARNVISAKFNDNVVETITPLEEDGNLVLLT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQI 122
            +D        HS AH++A+A+  ++P V + IGP I+ GFYYD D   Q  S ++  +I
Sbjct: 62  FKDDDGKQAFWHSTAHLLAQAITKLYPGVNLTIGPSIDKGFYYDVDPNGQSISENDFPEI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EKKM E+      F    +S  +A E +++K   YKVE++E++   E +T     ++ DL
Sbjct: 122 EKKMLELARGKHDFQMHPVSKTEALEYYKTKNNPYKVELIENLTDGE-ITFCDHDDFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRG H+ +TG +K   KLM +AGAYWRGD N   L+RIYG ++  Q+EL +YL  LEE++
Sbjct: 181 CRGGHIPNTGFIKAV-KLMNIAGAYWRGDENNAQLTRIYGISFPKQKELKEYLELLEEAK 239

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
           KRDHRKL +E+ LF  ++  G G+  W  KG  +   L  +++   ++  Y+ + +P + 
Sbjct: 240 KRDHRKLGKELKLFAFSQKVGLGLPLWLPKGAALRDRLEKFLKDAQENAGYQPVVSPHIG 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            + L+  SGH+  Y  + F       T +D   + LKPMNCP H  ++N    SYR+LP 
Sbjct: 300 QKELYMTSGHFQKYGEDSFQ---PIKTPQDGEEYLLKPMNCPHHCEIYNAQTWSYRDLPQ 356

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R AEFG+VYR E SG LHGL RVRGFTQDDAH+FCT EQ+  E  K+ +L++ ++   GF
Sbjct: 357 RYAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCTPEQLDEEFKKVIDLVLYVFGSLGF 416

Query: 421 EKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDR-INTGVLLGEGAFY 475
           E    ++S R    P K +GSD  W  AE+        I N+++++ +   ++ GE AFY
Sbjct: 417 ENFTAQVSLRDPENPSKYIGSDENWKKAES-------AILNAAEEKGLTYKIVKGEAAFY 469

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDA+GR WQ GTIQVD+NLP RF   Y  S +E   PVMIHRA FGS+ERFI
Sbjct: 470 GPKLDFMVKDALGRQWQLGTIQVDYNLPERFELEYKGSDNEMHRPVMIHRAPFGSLERFI 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            I+IE+  GN PLWL P QA + +I+     Y++++ +LLK H +    D R ET+  KI
Sbjct: 530 AILIEHTGGNFPLWLMPEQATILSISEKYENYSKKVLSLLKKHEIRATFDNRGETMGKKI 589

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           RE  + K P ++I G+ E    ++ +R+ G     ++S+     I+  +
Sbjct: 590 REAEMNKTPYMLIVGESEVENETVSVRKHGGEDLGQMSITSFAEIINAQ 638


>gi|260591627|ref|ZP_05857085.1| threonine--tRNA ligase [Prevotella veroralis F0319]
 gi|260536427|gb|EEX19044.1| threonine--tRNA ligase [Prevotella veroralis F0319]
          Length = 649

 Score =  480 bits (1235), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 247/639 (38%), Positives = 395/639 (61%), Gaps = 19/639 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           +K+TFPDGS++ +    TG  +AESIS +LA+  V+  +NG+  +L+ P+ E  +I +  
Sbjct: 2   VKITFPDGSVREYEQGVTGYQIAESISPALARDVVSCGVNGETVELNRPINEDATIALYK 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF--DKEQPFSSDELAQ 121
            +D        H+ AH++AEA+Q ++P +Q   GP +E+GF+YD    K Q  S ++  +
Sbjct: 62  FDDEEGKHTFWHTSAHLLAEALQELYPGIQFGFGPAVENGFFYDVMPPKGQAISENDFPK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE+KM+E+  ++   ++  +S   A + F +  + YKVE +E       ++ Y QG + D
Sbjct: 122 IEEKMRELAKKNEQVVRHDISKANAVKEFTADGQEYKVEHIEQDLEDGTISTYTQGSFTD 181

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ STG +K   K+  VAGA+WRGD+ R  ++RIYG ++  ++ L +YL  LEE+
Sbjct: 182 LCRGPHLVSTGAIKAI-KITSVAGAFWRGDAKREQMTRIYGISFPKKKMLDEYLVMLEEA 240

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQV 299
           +KRDHRK+ +EM+LF  ++  G G+  W  KG ++   L   +RR ++  +Y+E+ TP +
Sbjct: 241 KKRDHRKIGKEMELFMFSDRVGKGLPIWLPKGTQLRLRLQELLRRLLRPYNYQEVITPGI 300

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             ++L+  SGH+  Y  + F       T ++   + LKPMNCP H  V+ +  +SY++LP
Sbjct: 301 GGKNLYVTSGHYAHYGKDAFQ---PIHTPEEDEEYMLKPMNCPHHCEVYAYKPRSYKDLP 357

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AEFG+V+R E SG LHGL RVR FTQDDAH+F   +Q+  E     ++I+ ++  FG
Sbjct: 358 LRIAEFGTVFRYEKSGELHGLTRVRTFTQDDAHIFVRPDQVKAEFETNIDIILKVFATFG 417

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           F+    ++S R     EK +GSD +W+++E  +K   +      +  +   V LGE AFY
Sbjct: 418 FDNYEAQISLRDPNDKEKYIGSDEVWEESEAAIKAACE------EKGLKARVELGEAAFY 471

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDAIGR WQ GTIQVD+NLP+RF   Y    + K  PVMIHRA FGS+ERF 
Sbjct: 472 GPKLDFMVKDAIGRRWQLGTIQVDYNLPNRFKLEYTAEDNTKKTPVMIHRAPFGSLERFT 531

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE+  G+ PLWL+P Q  +  I+    +YA+++     +H +    D RNE I  KI
Sbjct: 532 AVLIEHTAGHFPLWLTPDQVAILPISEKYNDYARKVKAYFDAHDVRSIMDDRNEKIGRKI 591

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           R++ +K++P ++I G+KEA++  + +R+ G      +++
Sbjct: 592 RDNELKRVPYMVIVGEKEAAQGLVSMRQQGGGEQATMTM 630


>gi|315607978|ref|ZP_07882971.1| threonine--tRNA ligase [Prevotella buccae ATCC 33574]
 gi|315250447|gb|EFU30443.1| threonine--tRNA ligase [Prevotella buccae ATCC 33574]
          Length = 650

 Score =  480 bits (1235), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 248/639 (38%), Positives = 392/639 (61%), Gaps = 19/639 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           +K+TFPDGS++ +    TG  +AESIS +LA+  V+  +NG+  +L+ P+ +  +I +  
Sbjct: 2   VKITFPDGSVREYEQGVTGLQIAESISPALARNVVSCGVNGETVELNRPINDDATIALYK 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF--DKEQPFSSDELAQ 121
            ED        H+ AH++AEA++ ++P +Q   GP IE+GF+YD      Q  S ++  +
Sbjct: 62  FEDEEGKHTFWHTSAHLLAEALKELYPGIQFGFGPAIENGFFYDVMPAGGQTISENDFPK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE KM E+  +D P +++ +   +A E F++  + YK E ++      +++ Y QG + D
Sbjct: 122 IEAKMLELAKKDEPVVRREVPKAEALEEFKADGQTYKCEHIDLDLEDGSISTYTQGNFTD 181

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ STG +K   K+  VAGA+WRGD+ R  ++RIYG ++  ++ L +YL  LEE+
Sbjct: 182 LCRGPHLISTGAIKAL-KITSVAGAFWRGDAKREQMTRIYGISFPKKKMLDEYLVMLEEA 240

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQV 299
           +KRDHRK+ +EM+LF  +E  G G+  W  KG ++   L   +R  ++  +Y+E+ TP +
Sbjct: 241 KKRDHRKIGKEMELFMFSERVGKGLPIWLPKGTELRLRLQELLRSMLRPYNYQEVITPGI 300

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             + L+  SGH+  Y  + F       T ++   + LKPMNCP H  VF    +SY++LP
Sbjct: 301 GGKSLYVTSGHYAHYGKDAFQ---PIHTPEEDEEYMLKPMNCPHHCEVFARKPRSYKDLP 357

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AEFG+V+R E SG LHGL RVR FTQDDAH+F   +Q+  E     ++I+ ++  FG
Sbjct: 358 LRIAEFGTVFRYEKSGELHGLTRVRTFTQDDAHIFVRPDQVKAEFETNIDIILKVFNIFG 417

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           F+    ++S R     EK +GSD +W+++E  +K      +  ++  +   V LGE AFY
Sbjct: 418 FDNYEAQISLRDPNDKEKYIGSDEVWEESETAIK------EACAEKGLKARVELGEAAFY 471

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDAIGR WQ GTIQVD+NLP+RF   Y    + K  PVMIHRA FGS+ERF 
Sbjct: 472 GPKLDFMVKDAIGRRWQLGTIQVDYNLPNRFKLEYTAEDNSKKTPVMIHRAPFGSLERFT 531

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE+  G+ PLWL+P Q  +  I+    +YA+ +A    S  +    D RNE I  KI
Sbjct: 532 AVLIEHTAGHFPLWLTPDQVAILPISEKYNDYAKSVARYFDSVGVRAIIDERNEKIGRKI 591

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           R++ +K++P ++I G+KE++E  + +R+ G      +++
Sbjct: 592 RDNELKRVPYMVIVGEKESAEGLVSMRKQGGGEQATMTM 630


>gi|322368472|ref|ZP_08043041.1| threonyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
 gi|320552488|gb|EFW94133.1| threonyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
          Length = 640

 Score =  479 bits (1234), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 256/636 (40%), Positives = 382/636 (60%), Gaps = 23/636 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           SDI +T PDG+  +    AT  DVA  I   L K  VA  ++G++ D + P+ E   + I
Sbjct: 2   SDIVVTLPDGAELDMEEGATVEDVAYEIGPGLGKDTVAGVVDGELVDKATPLSEDCRLVI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +T +    L+V+RHS AH+ A+A++ + PE ++ IGP  ++GFYYD    +   SD+LA+
Sbjct: 62  VTDQSDEYLSVLRHSAAHVFAQALKRLHPEAKLTIGPWTDEGFYYDIAGIE-LDSDDLAE 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWF 180
           IE +  +II  D    +   S E+A +++E  +  YK +IL++  A E+ ++ Y QGE+ 
Sbjct: 121 IEDEGHDIIEEDLDIERVEKSREEAFDMYEDNE--YKQDILDTEAADEDSISFYEQGEFS 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLC+GPHV STG++  F  L++ + AYWRGD    ML+R+YGTA+ T++ L QYL  +EE
Sbjct: 179 DLCKGPHVSSTGEIGGF-TLLETSAAYWRGDEENDMLTRVYGTAFPTEKGLEQYLERMEE 237

Query: 241 SEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           +E+RDHRKL +E+DLF I E  G G+  +H  G  I + L  Y     +   Y+E+ TP 
Sbjct: 238 AEERDHRKLGKELDLFSIDETTGPGLPLYHPHGKTILRELSDYAGELNRGAGYDEVETPH 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW++SGH+D+Y  +MF +   D+       + LKPMNCPGH  +F+    SYR+L
Sbjct: 298 LFRTELWKKSGHYDNYVDDMFLLDVNDEE------YGLKPMNCPGHATIFDQHSWSYRDL 351

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R  E G VYR E  G L GL RV  FT DD H+F   +Q+  E  ++ +LI  + + F
Sbjct: 352 PIRYFENGKVYRKEQRGELSGLSRVWSFTIDDGHLFVRPDQIEREIRQVMDLIFEVIETF 411

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
             + + V L+TRPEK VGSD LW+ AE  ++ VL++        I+  +  G+GAFYGPK
Sbjct: 412 DLD-VEVALATRPEKSVGSDELWEHAEEQLRSVLESTG------IDYDIEAGDGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++  +DA+GR W   T+Q+DFN+P RF+  YV   +E+  PVMIHRA++GS ERF  ++
Sbjct: 465 IDFGFEDALGRVWDGPTVQLDFNMPERFDLTYVTEENEEERPVMIHRALYGSYERFFMVL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+F G  PLWLSP Q  V  ++   + YA  +AN L    + +E   R+ T+  KI++ 
Sbjct: 525 IEHFDGKFPLWLSPEQVRVLPVSDDNLGYAHRVANELDDFRVEVED--RSWTVGRKIQQA 582

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
              ++P +II G  E    +I +R       + VSL
Sbjct: 583 HDDRVPYMIIVGGDEEEAGTISVRDRLEREEKDVSL 618


>gi|318041217|ref|ZP_07973173.1| threonyl-tRNA synthetase [Synechococcus sp. CB0101]
          Length = 570

 Score =  479 bits (1234), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 250/550 (45%), Positives = 341/550 (62%), Gaps = 19/550 (3%)

Query: 78  AHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFL 137
           +H+MA AVQ ++P+ QV IGP  E+GFYYDFD   PF+  +L  I+K+M +II +  P  
Sbjct: 2   SHVMAMAVQRLFPKAQVTIGPWTENGFYYDFDSPDPFTEADLKAIKKEMIKIINKKLPLE 61

Query: 138 KQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE-WFDLCRGPHVRSTGQVK- 195
           +  +S  +A    +++ E YK+EIL  I   E +TLY  GE W+DLC GPHV ST ++  
Sbjct: 62  RLEVSRAEAETKIKAQNEPYKLEILAGI--NEPITLYTLGEEWWDLCAGPHVASTAELNA 119

Query: 196 KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDL 255
           K F+L  VAGAYWRGD N   L RIYGTAW T ++L +Y    EE+++RDHR++  ++DL
Sbjct: 120 KAFELESVAGAYWRGDENNAQLQRIYGTAWETPEQLAEYKRRQEEAKRRDHRRIGTDLDL 179

Query: 256 FHIA-EDGSGVIFWHRKGWKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWD 312
           F I  E G+G++FWH +G ++ + LI  + R++     YE + TP V D  LW+ SGH D
Sbjct: 180 FSIEDEAGAGLVFWHPRGARM-RLLIENLWRELHFAAGYELLYTPHVADISLWKTSGHLD 238

Query: 313 SYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE 372
            Y  +MF     D+     R + LKPMNCP HV  +   L+SYRELP+R AE G+VYR E
Sbjct: 239 FYSESMFGPMQVDE-----REYQLKPMNCPFHVLTYASTLRSYRELPIRWAELGTVYRYE 293

Query: 373 PSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
             G +HGLMRVRGFTQDDAHVFC  +Q+ +E L I NL   I   F F    + LSTRPE
Sbjct: 294 RPGVMHGLMRVRGFTQDDAHVFCLPDQISDEILAILNLTEQILSTFDFRHYEINLSTRPE 353

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
           K +G DA+W+ A   +   LD  +     +I+ G     GAFYGPK +  ++DAIGR WQ
Sbjct: 354 KSIGEDAVWELATQGLIEALD--RKGWAYKIDEG----GGAFYGPKIDLKIEDAIGRMWQ 407

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
           C TIQ+DFNLP RF+  YV +   +  P+MIHRA+FGS+ERF GIM EN+ G+ P WL+P
Sbjct: 408 CSTIQLDFNLPERFDLEYVAADGSRQRPIMIHRAIFGSLERFFGIMTENYAGDFPFWLAP 467

Query: 553 IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
            Q  +  +T    +YA  +A  L++  +    D   + +   IR     KIP++ + G K
Sbjct: 468 EQIRLLPVTDEVRDYAAGVAAELQAAGVRASIDHSGDRLGKLIRNGEQMKIPVLGVIGAK 527

Query: 613 EASERSIGIR 622
           EA    I +R
Sbjct: 528 EAESGQISLR 537


>gi|288924947|ref|ZP_06418883.1| threonine--tRNA ligase [Prevotella buccae D17]
 gi|288338137|gb|EFC76487.1| threonine--tRNA ligase [Prevotella buccae D17]
          Length = 673

 Score =  479 bits (1234), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 248/631 (39%), Positives = 389/631 (61%), Gaps = 19/631 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           +K+TFPDGS++ +    TG  +AESIS +LA+  V+  +NG+  +L+ P+  + +I +  
Sbjct: 2   VKITFPDGSVREYEQGVTGLQIAESISPALARNVVSCGVNGETVELNRPINGDATIALYK 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF--DKEQPFSSDELAQ 121
            ED        H+ AH++AEA++ ++P +Q   GP IE+GF+YD      Q  S ++  +
Sbjct: 62  FEDEEGKHTFWHTSAHLLAEALKELYPGIQFGFGPAIENGFFYDVMPASGQTISENDFPK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE KM E+  +D P +++ +   +A E F++  + YK E ++      +++ Y QG + D
Sbjct: 122 IEAKMLELAKKDEPVVRREVPKAEALEEFKADGQTYKCEHIDLDLEDGSISTYTQGNFTD 181

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ STG +K   K+  VAGA+WRGD+ R  ++RIYG ++  ++ L +YL  LEE+
Sbjct: 182 LCRGPHLMSTGAIKAL-KITSVAGAFWRGDAKREQMTRIYGISFPKKKMLDEYLVMLEEA 240

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQV 299
           +KRDHRK+ +EM+LF  +E  G G+  W  KG ++   L   +R  ++  +Y+E+ TP +
Sbjct: 241 KKRDHRKIGKEMELFMFSERVGKGLPIWLPKGTELRLRLQELLRSMLRPYNYQEVITPGI 300

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             + L+  SGH+  Y  + F       T ++   + LKPMNCP H  VF    +SY++LP
Sbjct: 301 GGKSLYVTSGHYAHYGKDAFQ---PIHTPEEDEEYMLKPMNCPHHCEVFARKPRSYKDLP 357

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AEFG+V+R E SG LHGL RVR FTQDDAH+F   +Q+  E     ++I+ ++  FG
Sbjct: 358 LRIAEFGTVFRYEKSGELHGLTRVRTFTQDDAHIFVRPDQVKAEFETNIDIILKVFNIFG 417

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           F+    ++S R     EK +GSD +W+++E  +K      +  ++  +   V LGE AFY
Sbjct: 418 FDNYEAQISLRDPNDKEKYIGSDEVWEESETAIK------EACAEKGLKARVELGEAAFY 471

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDAIGR WQ GTIQVD+NLP+RF   Y    + K  PVMIHRA FGS+ERF 
Sbjct: 472 GPKLDFMVKDAIGRRWQLGTIQVDYNLPNRFKLEYTAEDNSKKTPVMIHRAPFGSLERFT 531

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE+  G+ PLWL+P Q  +  I+    +YA+ +A    S  +    D RNE I  KI
Sbjct: 532 AVLIEHTAGHFPLWLTPDQVAILPISEKYNDYAKSVARYFDSVGVRAIIDERNEKIGRKI 591

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGS 626
           R++ +K++P ++I G+KE++E  + +R+ G 
Sbjct: 592 RDNELKRVPYMVIVGEKESAEGLVSMRKQGG 622


>gi|154174749|ref|YP_001407384.1| threonyl-tRNA synthetase [Campylobacter curvus 525.92]
 gi|171769252|sp|A7GVZ2|SYT_CAMC5 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|112802358|gb|EAT99702.1| threonyl-tRNA synthetase [Campylobacter curvus 525.92]
          Length = 606

 Score =  479 bits (1234), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 254/615 (41%), Positives = 388/615 (63%), Gaps = 25/615 (4%)

Query: 39  VAVAINGKVCDL-SDPVREGSIEIITPED-PRSLAVIRHSCAHIMAEAVQSIWPEVQVAI 96
           +A  +NG++ D  S   RE   + +  ++ P +L VIRHSCAH+MA+A++S++P  +  +
Sbjct: 5   IAYKLNGELIDTQSINGREAVAQPVYFDNSPDALHVIRHSCAHLMAQAIKSLYPNAKFFV 64

Query: 97  GPIIEDGFYYDFDKEQP---FSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESK 153
           GP +EDGFYYDF  ++        +L  IEKKM+E+   ++ F    +   KA    + K
Sbjct: 65  GPNVEDGFYYDFRVDEAGTKLGESDLEAIEKKMKELA--EAKFEITKICSTKAAMSEKFK 122

Query: 154 KEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSN 213
            +  K E+L+ IP  E V+ Y QG++ DLCRGPHV +T +  +FFKL +VAGAY  GD  
Sbjct: 123 NDDLKQEVLKRIPEGE-VSSYAQGDFEDLCRGPHVPNT-KFLRFFKLTRVAGAYLGGDET 180

Query: 214 RPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKG 272
           R ML+RIYGTA+  +  L +++  +EE++KRDHRKL  EM LF   E+ G G+  W   G
Sbjct: 181 REMLNRIYGTAYADKASLAEHIRIIEEAKKRDHRKLGVEMKLFGFDEEVGGGLPIWLPNG 240

Query: 273 WKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
            ++   L   + +  +D  YE +  P++L   +W++SGH+ +Y+ NM+       TI D 
Sbjct: 241 GRLRSKLEQILYKAHRDRGYEPVRGPELLKADVWKRSGHYANYKENMYFT-----TIDDA 295

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
             + +KPMNC GH+ V+   ++SYR+LP++  E+G V+R+E SG LHGL RVR F QDD+
Sbjct: 296 E-YGIKPMNCVGHIKVYQTEIRSYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFAQDDS 354

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
           H+FC   Q+    L+I +    I ++FGFE  M ++ST+P K +GSD +WD A N +K  
Sbjct: 355 HIFCMPSQIKQNILEILSFAGKIMQNFGFEYEM-EISTKPAKAIGSDEIWDIATNALKEA 413

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
           LD      ++    G+  G GAFYGPK +  + DA+ R WQCGTIQVDFNLP RF+  Y+
Sbjct: 414 LD------ENGFKYGIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDFNLPERFDLGYI 467

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
           ++++E+  PVM+HRA+ GS ERFIGI+IE+  G LP +++P Q ++  I+ + ++YA+EI
Sbjct: 468 DANNERQRPVMLHRALLGSFERFIGILIEHTAGELPFFIAPTQVVIVPISDAHLDYAKEI 527

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
           A  L+  ++  E   +NE++N +IR    +++P+II+ GD E + RS+ +R   + T   
Sbjct: 528 ARELRKFNIDSEVASKNESLNKRIRTAEKQRVPMIIVLGDNEVANRSVALRDRQARTQSD 587

Query: 632 VSLLDAIPILTKESL 646
           +SL + +  LTKE L
Sbjct: 588 MSLAEFLN-LTKEKL 601


>gi|315656661|ref|ZP_07909548.1| threonine--tRNA ligase [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
 gi|315492616|gb|EFU82220.1| threonine--tRNA ligase [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
          Length = 669

 Score =  479 bits (1233), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 264/673 (39%), Positives = 390/673 (57%), Gaps = 55/673 (8%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           S+I +T  DG         TG D+         K+ +A  ING+  DL   + +G ++E 
Sbjct: 2   SEINVTI-DGKATQIESTITGEDLYRD-----RKEVIAYFINGQARDLYRELHDGDTVEA 55

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           IT +    L ++RHSC H+MA+AV+ + P V+  IGP IE+GFYYDF  ++PF+ ++L  
Sbjct: 56  ITIDSEMGLNILRHSCTHVMAQAVKQVRPNVKYGIGPFIENGFYYDFGVDEPFTPEDLIA 115

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL---------ESIPAKENV- 171
           IEK M  I   D  F+++ ++ ++ R   E   + YK+E++         +   A  +V 
Sbjct: 116 IEKYMARICKEDQKFVRRVVTEDEGRA--ELADQPYKLELIGLKGTDSDNDQAAAGASVE 173

Query: 172 ------TLY----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSR 219
                 T+Y    + GE  W DLCRGPHV ST  +   FKLMKV+ AYWRGD     L R
Sbjct: 174 VGGSELTIYDNVRKNGEVAWKDLCRGPHVPSTRLLNGVFKLMKVSAAYWRGDQANDSLQR 233

Query: 220 IYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQT 278
           IYGTAW T+ +L +Y+  +EE+ KRDHR+L  E+DLF   E+ GSG+  +H KG  +   
Sbjct: 234 IYGTAWATKDDLKEYVTRMEEAAKRDHRRLGNELDLFSFPEEIGSGLAVFHPKGAMVRME 293

Query: 279 LISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV-----KCAD--DTIKD 330
           + +Y RR+ +++ Y  + TP V    L++ SGH + Y+  MF       +C D  +  K+
Sbjct: 294 MENYSRRRHLEEGYSFVYTPHVTKGQLFETSGHLEWYKDGMFPPMRVDEECDDQGNVTKE 353

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
              + LKPMNCP H  ++    +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDD
Sbjct: 354 GFDYYLKPMNCPMHNLIYKSRSRSYRELPLRLFEFGTVYRYEKSGVVHGLTRGRGFTQDD 413

Query: 391 AHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR-PEKRVGSDALWDDAENIMK 449
           +H++CT+EQM +E  K+   ++ + KD+G +   ++LST+ P K VGSD +W++A N + 
Sbjct: 414 SHIYCTREQMKDELTKLLTFVLDLLKDYGLDDFYLELSTKNPHKFVGSDEIWEEATNTLA 473

Query: 450 GVLDTIKNSSQDRINTGVLL---GEGA-FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSR 505
            V             +G+ L    EGA FYGPK     +DAIGR WQ  TIQ+DFNLP R
Sbjct: 474 EVATA----------SGLELVPDPEGAAFYGPKISVQARDAIGRTWQMSTIQLDFNLPER 523

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAV 565
           F+  Y  +   +  PVMIHRA+FGSIERF G++ E++ G  P WL+P+Q  +  +  +  
Sbjct: 524 FDLEYTAADGSRQRPVMIHRALFGSIERFFGVLTEHYAGAFPAWLAPVQVRLVPVAEAFN 583

Query: 566 EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
           +Y ++IAN L++ ++ +E D  ++    KIR  +  KIP  +I G ++A   ++  R  G
Sbjct: 584 DYCEDIANRLRAENVRVEVDTTDDRFGKKIRNAAKDKIPFTLIAGGEDAEANAVSFRYRG 643

Query: 626 STTTQKVSLLDAI 638
                 V +  AI
Sbjct: 644 GEQKNGVPIDQAI 656


>gi|146297790|ref|YP_001192381.1| threonyl-tRNA synthetase [Flavobacterium johnsoniae UW101]
 gi|189083608|sp|A5FP01|SYT_FLAJO RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|146152208|gb|ABQ03062.1| threonyl-tRNA synthetase [Flavobacterium johnsoniae UW101]
          Length = 648

 Score =  479 bits (1233), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 258/639 (40%), Positives = 394/639 (61%), Gaps = 23/639 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           IK+T PDGSI+ F    T  +VA++IS   A+  ++ + NG   +   P+  +G++ + T
Sbjct: 2   IKITLPDGSIREFAQGVTPMEVAKNISEGFARNVISASFNGTTIETETPLTTDGNLILYT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQI 122
             D        HS +H+MA+A++ ++P +++ +GP I +GFYYD D ++Q  S  +  +I
Sbjct: 62  WNDAEGKKAFWHSTSHVMAQALEELYPGIKLTLGPAIANGFYYDVDFEDQKISEADFKKI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E ++ EI      F  + ++  +A E++  K   YK E++ ++     +T      + DL
Sbjct: 122 EDRILEIARGKFDFKMRPVTKAEALEMY--KDNVYKTELISNL-EDGTITFCDHATFTDL 178

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRG H+ +TG +K   K+M VAGAYWRGD     L+R+YGT++  Q++LT+YL  LEE++
Sbjct: 179 CRGGHIPNTGIIKAV-KIMSVAGAYWRGDEKNKQLTRVYGTSFPKQKDLTEYLELLEEAK 237

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           +RDHRKL +E++LF  ++  G G+  W  KG  +   L  +++R + K  YE++ +P + 
Sbjct: 238 RRDHRKLGKELELFAFSQKVGQGLPLWLPKGAALRDRLEQFLKRAQKKAGYEQVVSPHIG 297

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            + L+  SGH+  Y A+ F       T  +   F LKPMNCP H  ++N    SY++LP 
Sbjct: 298 QKELYVTSGHYAKYGADSFQ---PIHTPAEGEEFLLKPMNCPHHCEIYNVRPWSYKDLPK 354

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R AEFG+VYR E SG LHGL RVRGFTQDDAH+FCT EQ+  E  K+ +L++ ++   GF
Sbjct: 355 RYAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCTPEQLDEEFKKVIDLVLYVFGSLGF 414

Query: 421 EKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDR-INTGVLLGEGAFY 475
           E    ++S R     EK +G+D  W+ AEN        I N+++D+ +NT V  GE AFY
Sbjct: 415 ENFTAQISLRDQEDREKYIGTDENWEKAEN-------AIINAAKDKGLNTVVEYGEAAFY 467

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDA+GR WQ GTIQVD+NLP RF   Y  + +E   PVMIHRA FGS+ERFI
Sbjct: 468 GPKLDFMVKDALGRQWQLGTIQVDYNLPERFELTYKGADNELHRPVMIHRAPFGSMERFI 527

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            I++E+  GN PLWL P QAI+ +++     YA+++ +LL++H +    D RNETI  KI
Sbjct: 528 AILLEHTAGNFPLWLMPEQAIILSLSEKYENYAKKVLDLLENHEIRALIDNRNETIGKKI 587

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           R+  ++KIP ++I G++E    +I IRR G      +++
Sbjct: 588 RDAEMQKIPFMLIVGEEEEKNGTISIRRHGQEGKGNITV 626


>gi|167756637|ref|ZP_02428764.1| hypothetical protein CLORAM_02174 [Clostridium ramosum DSM 1402]
 gi|237733925|ref|ZP_04564406.1| threonyl-tRNA synthetase [Mollicutes bacterium D7]
 gi|167702812|gb|EDS17391.1| hypothetical protein CLORAM_02174 [Clostridium ramosum DSM 1402]
 gi|229383006|gb|EEO33097.1| threonyl-tRNA synthetase [Coprobacillus sp. D7]
          Length = 577

 Score =  479 bits (1233), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 233/588 (39%), Positives = 372/588 (63%), Gaps = 20/588 (3%)

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE-L 119
           +I  ++   L+V+ HSCAH+MA+A++ ++P+ +  +GP++ +GFYYD D       DE +
Sbjct: 1   MIDFKEDEKLSVLNHSCAHVMAQAIKHLYPQAKFWVGPVVSEGFYYDVDLGNDVIKDEDI 60

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IEK+M++I        +Q +S E+A E+F  K + YK++++ +      ++ YRQG++
Sbjct: 61  PKIEKEMKKICKDGKRITRQEISKEEALEMF--KDDEYKIDLINNFENDTTISCYRQGDF 118

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV +    K F KL K +GAYW+GD    +L RIYG  + T ++L ++L  LE
Sbjct: 119 VDLCRGPHVETVKACKNF-KLTKHSGAYWKGDKENKVLQRIYGVCFETSEDLAKHLELLE 177

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQ 298
           E+++RDH+KL +E+ LF ++E   G+ F+  KG  +  TL  +      K+ YE I TP 
Sbjct: 178 EAKRRDHKKLGKELGLFMMSEYAPGMPFFLPKGMILRNTLEQFWYEEHAKEGYEFIKTPI 237

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++ + LW+ SGHW++Y+ +M+       ++ D R FA+KPMNCPG + V+ + L SY++L
Sbjct: 238 MMSRELWETSGHWENYKEDMYT------SMVDDREFAIKPMNCPGSLLVYKNSLHSYKDL 291

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+ E G V+R+E SG+L+GL RVR FTQDDAH++ T +Q+  E +++ N I  +Y   
Sbjct: 292 PLRMGELGQVHRHEASGALNGLFRVRTFTQDDAHIYMTPDQIEGEIIRLINFIDRVYGSL 351

Query: 419 GFEKIMVKLSTRPEKR-VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
                 ++LSTRPEK+ +G  A+W+ +E  +             ++N G    +GAFYGP
Sbjct: 352 NL-SYEIELSTRPEKKYIGDLAIWEKSEAALAAA--CKAAGKDYKVNPG----DGAFYGP 404

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K ++ +KD++GR WQCGTIQ+D NLP RF+  Y++   EK  PVM+HR +FGSIERFIGI
Sbjct: 405 KLDFHVKDSLGRVWQCGTIQLDMNLPERFDITYIDDKGEKVRPVMLHRVIFGSIERFIGI 464

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +IE+F G  PLWL+P+Q  V  + +   ++YA+E+  LLK     +E D R E + Y+IR
Sbjct: 465 LIEHFAGVFPLWLAPVQVKVLPVNNEYHLDYAKEVTELLKDKGFKVELDAREEKLGYRIR 524

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           E  ++K+P +++ G+ E  E+++  R+ G      V   D + +L ++
Sbjct: 525 EGQMEKVPYLLVLGNNERDEKTVTYRKHGEQKQITVPFDDFVAMLNQQ 572


>gi|298346881|ref|YP_003719568.1| threonyl-tRNA synthetase [Mobiluncus curtisii ATCC 43063]
 gi|298236942|gb|ADI68074.1| threonyl-tRNA synthetase [Mobiluncus curtisii ATCC 43063]
          Length = 669

 Score =  479 bits (1233), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 264/673 (39%), Positives = 389/673 (57%), Gaps = 55/673 (8%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           S+I +T  DG         TG D+         K+ +A  ING+  DL   + +G ++E 
Sbjct: 2   SEINVTI-DGKATQIESTITGEDLYRD-----RKEVIAYFINGQARDLYRELHDGDTVEA 55

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           IT +    L ++RHSC H+MA+AV+ + P V+  IGP IE+GFYYDF  ++PF+ ++L  
Sbjct: 56  ITIDSEMGLNILRHSCTHVMAQAVKQVRPNVKYGIGPFIENGFYYDFGVDEPFTPEDLKA 115

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL---------ESIPAKENV- 171
           IEK M  I   D  F+++ ++ ++ R   E   + YK+E++         +   A  +V 
Sbjct: 116 IEKYMARICKEDQKFVRRVVTEDEGRA--ELADQPYKLELIGLKGTDSDNDQAAAGASVE 173

Query: 172 ------TLY----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSR 219
                 T+Y      GE  W DLCRGPHV ST  +   FKLMKV+ AYWRGD     L R
Sbjct: 174 VGGSELTIYDNVRNNGEVAWKDLCRGPHVPSTRLLNGVFKLMKVSAAYWRGDQANDSLQR 233

Query: 220 IYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQT 278
           IYGTAW T+ +L +Y+  +EE+ KRDHR+L  E+DLF   E+ GSG+  +H KG  +   
Sbjct: 234 IYGTAWATKDDLKEYVTRMEEAAKRDHRRLGNELDLFSFPEEIGSGLAVFHPKGAMVRME 293

Query: 279 LISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV-----KCAD--DTIKD 330
           + +Y RR+ +++ Y  + TP V    L++ SGH + Y+  MF       +C D  +  K+
Sbjct: 294 MENYSRRRHLEEGYSFVYTPHVTKGQLFETSGHLEWYKDGMFPPMRVDEECDDQGNVTKE 353

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
              + LKPMNCP H  ++    +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDD
Sbjct: 354 GFDYYLKPMNCPMHNLIYKSRSRSYRELPLRLFEFGTVYRYEKSGVVHGLTRGRGFTQDD 413

Query: 391 AHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR-PEKRVGSDALWDDAENIMK 449
           +H++CT+EQM +E  K+   ++ + KD+G +   ++LST+ P K VGSD +W++A N + 
Sbjct: 414 SHIYCTREQMKDELTKLLTFVLDLLKDYGLDDFYLELSTKNPHKFVGSDEIWEEATNTLA 473

Query: 450 GVLDTIKNSSQDRINTGVLL---GEGA-FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSR 505
            V             +G+ L    EGA FYGPK     +DAIGR WQ  TIQ+DFNLP R
Sbjct: 474 EVATA----------SGLELVPDPEGAAFYGPKISVQARDAIGRTWQMSTIQLDFNLPER 523

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAV 565
           F+  Y  +   +  PVMIHRA+FGSIERF G++ E++ G  P WL+P+Q  +  +  +  
Sbjct: 524 FDLEYTAADGSRQRPVMIHRALFGSIERFFGVLTEHYAGAFPAWLAPVQVRLVPVAEAFN 583

Query: 566 EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
           +Y ++IAN L++ ++ +E D  ++    KIR  +  KIP  +I G ++A   ++  R  G
Sbjct: 584 DYCEDIANRLRAENVRVEVDTTDDRFGKKIRNAAKDKIPFTLIAGGEDAEANAVSFRYRG 643

Query: 626 STTTQKVSLLDAI 638
                 V +  AI
Sbjct: 644 GEQKNGVPIDQAI 656


>gi|299140628|ref|ZP_07033766.1| threonine--tRNA ligase [Prevotella oris C735]
 gi|298577594|gb|EFI49462.1| threonine--tRNA ligase [Prevotella oris C735]
          Length = 649

 Score =  479 bits (1232), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 248/631 (39%), Positives = 386/631 (61%), Gaps = 19/631 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           +K+TFPDGS++ +    TG  +AESIS +LA+  V+  +NG+  +L+ P+ E   I +  
Sbjct: 2   VKITFPDGSVREYEQGVTGLQIAESISPALARNVVSCGVNGETVELNRPINEDAKIALYK 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF--DKEQPFSSDELAQ 121
            +D        H+ AH++AEA+Q ++P +Q   GP +E GF+YD    K Q  S ++  +
Sbjct: 62  FDDEEGKHTFWHTSAHLLAEALQELYPGIQFGFGPAVESGFFYDVMPPKGQTISENDFPK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE KM E+  +D P +++ +S   A + F+S  + YK E +E       ++ Y QG + D
Sbjct: 122 IEAKMLELAKKDEPVVRKNISKADALQEFQSDGQTYKCEHIEQDLEDGTISTYTQGHFTD 181

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ STG +K   K+  VAGA+WRGD+ R  ++RIYG  +  ++ L +YL  LEE+
Sbjct: 182 LCRGPHLMSTGLIKAV-KITSVAGAFWRGDAKREQMTRIYGITFPKKKLLDEYLVMLEEA 240

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQV 299
           +KRDHRK+ +EM+LF  ++  G G+  W  KG ++   L   +R  ++  +Y+E+ TP +
Sbjct: 241 KKRDHRKIGKEMELFMFSDRVGKGLPIWLPKGTQLRLRLQELLRSLLRPYNYQEVITPGI 300

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             + L+  SGH+  Y  + F       T ++   + LKPMNCP H  V+    +SY++LP
Sbjct: 301 GGKSLYVTSGHYAHYGKDAFQ---PIHTPEEDEEYMLKPMNCPHHCEVYARKPRSYKDLP 357

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AEFG+V+R E SG LHGL RVR FTQDDAH+F   +Q+  E     ++I+ ++K F 
Sbjct: 358 LRIAEFGTVFRYEKSGELHGLTRVRTFTQDDAHIFVRPDQVKAEFETNIDIILKVFKTFQ 417

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           F+    ++S R     EK +GSD +W++++N ++         +++ I      GE AFY
Sbjct: 418 FDNYEAQISLRDPKDKEKYIGSDEIWEESQNAIREACKEKGLVAREEI------GEAAFY 471

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDAIGR WQ GTIQVD+NLP+RF   Y    + K  PVMIHRA FGS+ERF 
Sbjct: 472 GPKLDFMVKDAIGRKWQLGTIQVDYNLPARFKLEYTAEDNTKKTPVMIHRAPFGSLERFT 531

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE+  G+ PLWL+P Q  +  I+    +YA++++    S  +    D RNE I  KI
Sbjct: 532 AVLIEHTAGHFPLWLTPDQVAILPISEKYNDYAKQVSKYFDSVGVRAVIDDRNEKIGRKI 591

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGS 626
           R++ +K+IP ++I G+KEA+E  + +R+ G 
Sbjct: 592 RDNELKRIPYMVIVGEKEAAEGLVSMRKQGG 622


>gi|257784431|ref|YP_003179648.1| threonyl-tRNA synthetase [Atopobium parvulum DSM 20469]
 gi|257472938|gb|ACV51057.1| threonyl-tRNA synthetase [Atopobium parvulum DSM 20469]
          Length = 588

 Score =  479 bits (1232), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 243/579 (41%), Positives = 353/579 (60%), Gaps = 18/579 (3%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQIEKKMQE 128
           L VIRH  AH++A+A++ ++P  Q A GP  E+GFYYD D  +   + D+   IE +M++
Sbjct: 20  LEVIRHDAAHLLAQALKRLYPHAQFAYGPATENGFYYDVDLGDTKVNEDDFPAIEAEMKK 79

Query: 129 IIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           I+  +       L  ++A    + + E+YKVE +  +    ++T Y+QGE+ D+C GPH+
Sbjct: 80  IVKENLKIETFELPRDEAVAYMKERGESYKVEHIGDLAPDAHITFYKQGEYVDMCVGPHM 139

Query: 189 RSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRK 248
             T  VK F KL  ++GAYW+ D N  ML+RIYG A+ ++ EL QYL  +EE+EKRDHRK
Sbjct: 140 LYTKGVKAF-KLTSISGAYWKADKNNKMLTRIYGVAFGSKDELAQYLKMIEEAEKRDHRK 198

Query: 249 LAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQ 307
           + REM+LF +++ G G  FW   G  +   L  Y    + +  Y+E+ TP +L + LW+ 
Sbjct: 199 IGREMELFMMSDFGPGSPFWLPNGMALRNALTEYWHEMQARFGYQEVQTPLILSRSLWET 258

Query: 308 SGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGS 367
           SGHWD Y+ NM+       T  D   FA+KPMNCPG   ++    +SYR+LP++LAE G 
Sbjct: 259 SGHWDHYKENMYT------TTVDEEDFAIKPMNCPGACLIYKSKPRSYRDLPMKLAEAGL 312

Query: 368 VYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKL 427
            +R E  G+LHGL RVR FTQDDAH+F   +Q+  +     +LI + Y  FGF    V+L
Sbjct: 313 DHRYEMKGALHGLFRVREFTQDDAHLFIRPDQITEQVTDASHLITAYYAQFGF-PYRVEL 371

Query: 428 STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAI 487
           STRPE  +GSD  W+ AE  ++  LD +       I+  V  G+GAFYGPK ++ L D +
Sbjct: 372 STRPEDSMGSDEDWERAEQGLRDALDAMG------IDYVVNEGDGAFYGPKIDFHLTDCL 425

Query: 488 GRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           GR WQCGTIQ+DF LP  F   Y++S   K  P+MIHRA FGS ERFIGI+ EN++G  P
Sbjct: 426 GRSWQCGTIQLDFQLPHNFQLEYIDSDGTKKQPIMIHRAGFGSFERFIGILTENYEGKFP 485

Query: 548 LWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE-HSIKKIPII 606
           +WLSP Q  +  ++  +  YA E+A+ L +  + ++ D R+E I YKIRE  S+ ++P +
Sbjct: 486 VWLSPCQVKILPVSEKSRSYAHEVADKLAAAGIRVKVDDRDEKIGYKIREARSLDRVPYM 545

Query: 607 IICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           +I G++E    +I +R   S  T    L + I  + KE+
Sbjct: 546 LILGEQEVEAGNISVRD-RSNETHAAELDEFIAQVVKEN 583


>gi|203284615|ref|YP_002222355.1| threonyl-tRNA synthetase [Borrelia duttonii Ly]
 gi|238690570|sp|B5RMR3|SYT_BORDL RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|201084058|gb|ACH93649.1| threonyl-tRNA synthetase [Borrelia duttonii Ly]
          Length = 583

 Score =  479 bits (1232), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 243/569 (42%), Positives = 356/569 (62%), Gaps = 17/569 (2%)

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           RHS AH+MAEAV  ++P  ++AIGP I+DGFYYDFD E+  S D+L  IE KM+EI+   
Sbjct: 15  RHSIAHVMAEAVLELFPNTKIAIGPPIKDGFYYDFDFEKHISEDDLLLIEHKMREILKTG 74

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQ 193
           SPF+++ ++ E+A  LF  K E YK++++++    + +T+Y+  ++ DLCRGPHV +  +
Sbjct: 75  SPFIREVITREQALVLF--KDEPYKIDLIQNFDVTDEITIYKSHKFTDLCRGPHVDNMNK 132

Query: 194 VK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLARE 252
           +  K FKL  +AGAYWRGD    MLSRIYGT WN +++L  YL   EE +KRDHRKL RE
Sbjct: 133 LDPKAFKLTSIAGAYWRGDERNKMLSRIYGTLWNNEKDLKAYLKLQEEIKKRDHRKLGRE 192

Query: 253 MDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGH 310
           ++LF + ++ G G+IF+H  G +I   + ++ R +  K+ Y+ + TP +    LW+ SGH
Sbjct: 193 LNLFSVHDEIGPGLIFFHPHGARIRALIENFWREEHFKNGYDILFTPHIGKSWLWETSGH 252

Query: 311 WDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYR 370
            D Y+ +MF     +    D   + +KPMNCP H+A++N    SYR+LP R AE G+VYR
Sbjct: 253 LDFYKESMF-----EKIEMDRSDYYVKPMNCPFHIAIYNTDKHSYRDLPFRWAELGTVYR 307

Query: 371 NEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR 430
            E  G++HG MRVRGFTQDDAH+ CT EQ+  E  ++    I ++  FGF  +   LST+
Sbjct: 308 YEKIGAIHGTMRVRGFTQDDAHIICTYEQVNFEVREVLRFAIDMWNKFGFTNLKAYLSTK 367

Query: 431 PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRD 490
           PEK VG D  W  A  +++  L          I+  +  G GAFYGPK +  + D++GR 
Sbjct: 368 PEKAVGDDDDWQMAVKVLEKALIDFN------IDFDIDEGGGAFYGPKIDLKIIDSLGRA 421

Query: 491 WQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL 550
           WQ  TIQ DFNLP RF   Y     ++  P MIHRA+ GSIERF GI++E++ G  P+WL
Sbjct: 422 WQMSTIQFDFNLPVRFKMTYTAEDGKEKRPFMIHRALLGSIERFFGILVEHYGGAFPVWL 481

Query: 551 SPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FRNETINYKIREHSIKKIPIIIIC 609
           +P+Q ++  + S   EYA E+ +  ++  + I+ D + N  +N KIR++  KK+P + I 
Sbjct: 482 APLQVVIIPVNSIVEEYALEVLSRFQNEGIRIKFDNYCNMRMNAKIRQYQSKKVPYMFII 541

Query: 610 GDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           G++E  E  I IR   +     + L +A+
Sbjct: 542 GEREVVEGKISIRTRTNEQINGLELKEAL 570


>gi|157165430|ref|YP_001465955.1| threonyl-tRNA synthetase [Campylobacter concisus 13826]
 gi|171855003|sp|A7ZAZ7|SYT_CAMC1 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|112801821|gb|EAT99165.1| threonyl-tRNA synthetase [Campylobacter concisus 13826]
          Length = 606

 Score =  479 bits (1232), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 249/615 (40%), Positives = 387/615 (62%), Gaps = 25/615 (4%)

Query: 39  VAVAINGKVCDL-SDPVREGSIEIITPEDPR-SLAVIRHSCAHIMAEAVQSIWPEVQVAI 96
           +A  +NG++ D  S   RE S E I  ++ + +L VIRHSCAH+MA+A++S++P+ +  +
Sbjct: 5   IAYKLNGEIVDTQSIAGRESSAEPIYFDNSKEALHVIRHSCAHLMAQAIKSLYPKAKFFV 64

Query: 97  GPIIEDGFYYDF---DKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESK 153
           GP +EDGFYYDF   D+       +LA IE KM+E+  +    +K   +     E F  K
Sbjct: 65  GPNVEDGFYYDFRVDDEGTKLGESDLAAIEDKMKELAEKKFDIVKTCSTKANMSEKF--K 122

Query: 154 KEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSN 213
            +  K E+L+ IP  E V+ Y QG++ DLCRGPH+ +T +  KFFKL +VAGAY  GD +
Sbjct: 123 NDDLKQEVLKRIPDGE-VSSYAQGDFEDLCRGPHLPNT-KFLKFFKLTRVAGAYLGGDES 180

Query: 214 RPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKG 272
           R ML+RIYGTA+  ++ L +++  +EE++KRDHRKL  EM LF   E+ G G+  W   G
Sbjct: 181 REMLTRIYGTAYADKESLKEHIRIIEEAKKRDHRKLGVEMKLFTFDEEVGGGLPIWLPNG 240

Query: 273 WKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
            ++   L   + +  +D  YE +  P++L   +W++SGH+ +Y+ NM+       T  D 
Sbjct: 241 GRLRSKLEQLLYKAHRDRGYEPVRGPELLKADVWRRSGHYANYKENMYF------TTIDE 294

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
             + +KPMNC GH+ V+   ++SYR+LP++  E+G V+R+E SG LHGL RVR F QDD+
Sbjct: 295 TEYGIKPMNCVGHIKVYQSDIRSYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFAQDDS 354

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
           H+FC   Q+    L+I     +I ++FGF   M ++ST+P K +G D +WD A   +K  
Sbjct: 355 HIFCMPSQIKENILEILKFAGTIMENFGFHYEM-EISTKPAKAIGGDEIWDTATKALKEA 413

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
           LD      ++    G+  G GAFYGPK +  + DA+ R WQCGTIQVDFNLP RF+  Y+
Sbjct: 414 LD------ENGFKYGIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDFNLPERFDLGYI 467

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
           ++++E+  PVM+HRA+ GS ERFIGI++E+  G LP +++P Q ++  I+ + ++YA+EI
Sbjct: 468 DANNERQRPVMLHRALLGSFERFIGILLEHTAGELPFFIAPTQVVIVPISDAHLDYAKEI 527

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
           +  L+  ++  E   +NE++N +IR    +++P+I++ GD E + +S+ +R   + T   
Sbjct: 528 SRELRKINVDSEIASKNESLNKRIRTAEKQRVPMIVVLGDNEVANKSVALRDRQARTQSD 587

Query: 632 VSLLDAIPILTKESL 646
           +SL + +  LTKE L
Sbjct: 588 MSLAEFVN-LTKEKL 601


>gi|284166054|ref|YP_003404333.1| threonyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511]
 gi|284015709|gb|ADB61660.1| threonyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511]
          Length = 649

 Score =  478 bits (1231), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 262/626 (41%), Positives = 371/626 (59%), Gaps = 26/626 (4%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           I +  PDGS       AT  D A  I   L +  VA  ++G++    +PV +G  +EI+T
Sbjct: 12  ITVVLPDGSELEVASDATVEDCAYEIGPGLGRDTVAGKLDGELVAKEEPVYDGVELEIVT 71

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
                 L V+RHS AH +A+AV+  + +V +AIGP  ++GFYYDFD       ++LA +E
Sbjct: 72  DGSEEYLEVMRHSAAHCLAQAVERHYDDVDLAIGPPTDEGFYYDFDN-LDVDEEDLAALE 130

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN--VTLYRQGEWFD 181
            +++ IIA D    ++ +S E+A E      E YK+E+LE   A EN  VT Y+QGEW D
Sbjct: 131 DEIEAIIAEDYEIEREDVSIEEAEERL--AGEPYKLELLEEF-ADENDTVTFYKQGEWED 187

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LC GPHV STG++    +L+++AGAYWRGD    M +RIYGTA+  + +L  +L   +E+
Sbjct: 188 LCAGPHVDSTGEIG-VVELLEIAGAYWRGDEENTMQTRIYGTAFEDESDLEDFLERKQEA 246

Query: 242 EKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQV 299
           EKRDHR++  EM+LF I +  G G+  +H  G  + + L  ++    KD  Y+ + TP V
Sbjct: 247 EKRDHRRIGNEMNLFSIQDVTGPGLPLYHPPGKTVLKELEDFVEDLNKDAGYDYVETPHV 306

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               LW +SGH+++Y+ +MF     DD       F LKPMNCPGH A+F     SYR+LP
Sbjct: 307 FKTDLWHRSGHYENYQDDMFIFDVGDDE------FGLKPMNCPGHAAIFQDQSWSYRDLP 360

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R AE G VYR E  G L GL RV  FT DD H+F   +Q+  E  +I ++I  + + F 
Sbjct: 361 IRYAENGKVYRKEQRGELSGLSRVWAFTIDDGHLFIRPDQIRQEVEEIMDMITDVLETFD 420

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
            E  M  L+TRPEK VGSD +WD AE  ++ VL   +N + D     V  G+GAFYGPK 
Sbjct: 421 LEYEMA-LATRPEKSVGSDEIWDRAEEQLENVL---ENRAHD---YEVEEGDGAFYGPKI 473

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           ++  +DAIGR W   T+Q+DFN+P RF+  YV   +E+  PVMIHRA++GS ERF  ++I
Sbjct: 474 DFAFEDAIGRSWDGPTVQLDFNMPERFDLNYVGEDNEEHRPVMIHRALYGSYERFFMMLI 533

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E+++G  PLWL+P Q  V  I+   + YA  +AN        +E D R+ T+  KIR   
Sbjct: 534 EHYEGRFPLWLAPEQVRVLPISDDNLGYAHRVANEFDD--FRVEVDGRDSTLERKIRAAH 591

Query: 600 IKKIPIIIICGDKEASERSIGIR-RF 624
             ++P  II GD E  + +I +R RF
Sbjct: 592 DDRVPYQIIVGDNEEDDGNISVRDRF 617


>gi|241894947|ref|ZP_04782243.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Weissella
           paramesenteroides ATCC 33313]
 gi|241871665|gb|EER75416.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Weissella
           paramesenteroides ATCC 33313]
          Length = 699

 Score =  478 bits (1231), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 254/638 (39%), Positives = 386/638 (60%), Gaps = 24/638 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           +D+++TFPDG+ K+FPV+ T  ++A+SIS SLAKKAV+  +NG+   ++D +  G + E+
Sbjct: 42  ADVQITFPDGAEKSFPVNVTPLEIAKSISSSLAKKAVSGKLNGQYVGMNDAMTTGGNFEL 101

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWP-EVQVAIGPIIEDGFYYDFDKEQ--PFSSDE 118
           IT +D   L ++RHS +H++A+A+  ++P ++   +GP I +GFYYD DK +    S D+
Sbjct: 102 ITKDDEEGLQLLRHSVSHLLAQALNRLYPDQIHYGVGPFIANGFYYDTDKVEGNQISVDQ 161

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
             +IEK M+ I+  + P + + +S ++A E+F  K + YK+E++  +PA E++++  QGE
Sbjct: 162 FPEIEKMMKRIVKENLPIVSREISRDEALEMF--KNDPYKIELINDLPADEHISIAVQGE 219

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             +L RG  V STG +K F KL  VAGAYWRG S+ PML RIYGTA+    +L   +   
Sbjct: 220 HVELDRGGLVPSTGWIKHF-KLTSVAGAYWRGKSSNPMLQRIYGTAFWNADDLDAEMKRR 278

Query: 239 EESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINT 296
            E+++RDHRK+  + DLF  +++ GSG+  W   G  I +TL  Y+  R+++D Y+ + T
Sbjct: 279 AEAKERDHRKIGADQDLFFTSQEVGSGLAVWMPNGAAIRRTLERYIVDREVQDGYQHVYT 338

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P + + +L++QSGHWD YR +MF        + D     L+PMNCP H+ V+ H  +SYR
Sbjct: 339 PVLSNLNLYKQSGHWDHYRDDMFPPM----DMGDGEFLELRPMNCPSHIMVYKHHQRSYR 394

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +LP R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  KI  L++ +YK
Sbjct: 395 DLPFRVAELGMMHRYEKSGALTGLSRVREMTLNDGHTFVMLDQIEDEFKKILQLMVDVYK 454

Query: 417 DFGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
           DF       +LS R     EK    D +W+ A+ ++KG +D +       +      GE 
Sbjct: 455 DFDITDYRFRLSYRDPKNTEKYFDDDEMWEKAQRMLKGAMDDMD------LEYFEAEGEA 508

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           AFYGPK +  +K A+G +    TIQ+DF LP RF+  YV S  E   PVMIHR +  ++E
Sbjct: 509 AFYGPKLDVQIKTALGGEETLSTIQLDFLLPERFDVTYVGSDGELHRPVMIHRGIISTME 568

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETI 591
           RF   + E +KG  P WL+P Q  +  +   A  E+AQ + + L    +  + D RNE +
Sbjct: 569 RFTAYLTEMYKGAFPTWLAPHQVRIIPVNREAHGEFAQALTDRLVKQDIRADYDGRNEKL 628

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
            Y IR     KIP  ++ GD+E S  ++ IRRFGS  T
Sbjct: 629 GYLIRNAQSLKIPYTLVIGDEEVSNDTVTIRRFGSRDT 666


>gi|304389414|ref|ZP_07371377.1| threonine--tRNA ligase [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
 gi|304327224|gb|EFL94459.1| threonine--tRNA ligase [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
          Length = 669

 Score =  478 bits (1231), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 263/673 (39%), Positives = 389/673 (57%), Gaps = 55/673 (8%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           S+I +T  DG         TG D+         K+ +A  ING+  DL   + +G ++E 
Sbjct: 2   SEINVTI-DGKATQIESTITGEDLYRD-----RKEVIAYFINGQARDLYRELHDGDTVEA 55

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           IT +    L ++RHSC H+MA+AV+ + P V+  IGP IE+GFYYDF  ++PF+ ++L  
Sbjct: 56  ITIDSEMGLNILRHSCTHVMAQAVKQVRPNVKYGIGPFIENGFYYDFGVDEPFTPEDLKA 115

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL---------------ESIP 166
           IEK M  I   D  F+++ ++ ++ R   E   + YK+E++                S+ 
Sbjct: 116 IEKYMARICKEDQKFVRRVVTEDEGRA--ELADQPYKLELIGLKGTDSDNDQAAAGASVE 173

Query: 167 AKEN-VTLY----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSR 219
              N +T+Y    + GE  W DLCRGPHV ST  +   FKLMKV+ AYWRGD     L R
Sbjct: 174 VGGNELTIYDNVRKNGEVAWKDLCRGPHVPSTRLLNGVFKLMKVSAAYWRGDQANDSLQR 233

Query: 220 IYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQT 278
           IYGTAW T+ +L +Y+  + E+ KRDHR+L  E+DLF   E+ GSG+  +H KG  +   
Sbjct: 234 IYGTAWATKDDLKEYVTRMAEAAKRDHRRLGNELDLFSFPEEIGSGLAVFHPKGAMVRME 293

Query: 279 LISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV-----KCAD--DTIKD 330
           + +Y RR+ +++ Y  + TP V    L++ SGH + Y+  MF       +C D  +  K+
Sbjct: 294 MENYSRRRHLEEGYSFVYTPHVTKGQLFETSGHLEWYKDGMFPPMRVDEECDDQGNVTKE 353

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
              + LKPMNCP H  ++    +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDD
Sbjct: 354 GFDYYLKPMNCPMHNLIYKSRSRSYRELPLRLFEFGTVYRYEKSGVVHGLTRGRGFTQDD 413

Query: 391 AHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR-PEKRVGSDALWDDAENIMK 449
           +H++CT+EQM +E  K+   ++ + KD+G +   ++LST+ P K VGSD +W++A N + 
Sbjct: 414 SHIYCTREQMKDELTKLLTFVLDLLKDYGLDDFYLELSTKNPHKFVGSDEIWEEATNTLA 473

Query: 450 GVLDTIKNSSQDRINTGVLL---GEGA-FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSR 505
            V             +G+ L    EGA FYGPK     +DAIGR WQ  TIQ+DFNLP R
Sbjct: 474 EVATA----------SGLELVPDPEGAAFYGPKISVQARDAIGRTWQMSTIQLDFNLPER 523

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAV 565
           F+  Y  +   +  PVMIHRA+FGSIERF G++ E++ G  P WL+P+Q  +  +  +  
Sbjct: 524 FDLEYTAADGSRQRPVMIHRALFGSIERFFGVLTEHYAGAFPAWLAPVQVRLVPVAEAFN 583

Query: 566 EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
           +Y ++IAN L++ ++ +E D  ++    KIR  +  KIP  +I G ++A   ++  R  G
Sbjct: 584 DYCEDIANRLRAENVRVEVDTTDDRFGKKIRNAAKDKIPFTLIAGGEDAEANAVSFRYRG 643

Query: 626 STTTQKVSLLDAI 638
                 V +  AI
Sbjct: 644 GEQKNGVPIDQAI 656


>gi|325954887|ref|YP_004238547.1| threonyl-tRNA synthetase [Weeksella virosa DSM 16922]
 gi|323437505|gb|ADX67969.1| threonyl-tRNA synthetase [Weeksella virosa DSM 16922]
          Length = 640

 Score =  478 bits (1231), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 261/648 (40%), Positives = 388/648 (59%), Gaps = 21/648 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           I +T PDGS+K +P   T  +VA+SIS  LA+  ++  +N K  +++ P+ E  +++++T
Sbjct: 2   INITLPDGSVKQYPQKVTPLEVAKSISEGLARNVLSALVNDKQTEITTPITENATLQLLT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQI 122
             D        HS AH++A+A+   +P  ++ IGP IE GFYYD D  E  F   +  +I
Sbjct: 62  WNDDLGKKAFWHSSAHLLAQAILQFYPNAKLTIGPAIEKGFYYDVDFGEDSFGEKDFEKI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK M E   + + F  +  S  KA  L E K   YK E++ ++    ++T      + DL
Sbjct: 122 EKAMLENAKKKAEF--KLYSVSKAEALEEYKNNEYKTELISNL-EDGDITFCVHDNFTDL 178

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRG H+ +TG VK   K++ VAGAYWRGD    ML+R+YG  +  Q++LT+YL  LEE++
Sbjct: 179 CRGGHLPNTGFVKAA-KILNVAGAYWRGDEKNKMLTRVYGITFPKQKDLTEYLELLEEAK 237

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVL 300
           KRDHRKL +E+ LF  +E  G G+  W  KG  + + L +++ +++ K  YE + TP + 
Sbjct: 238 KRDHRKLGKELGLFAFSEKVGQGLPLWLPKGAALRRKLENFLLKQQQKLGYEMVITPHIG 297

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            + L+  SGH+  Y A+ F       T  +   F LKPMNCP H  ++     SYR+LP 
Sbjct: 298 QKELYVTSGHYAKYGADSFQ---PIQTPNEGEEFLLKPMNCPHHCEIYKTSQWSYRDLPK 354

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R AEFG+VYR E SG LHGL RVRGFTQDDAH+FCT +Q+  E  K+ +L++ +++  GF
Sbjct: 355 RYAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCTSDQLLEEFKKVIDLVLFVFESLGF 414

Query: 421 EKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           +    ++S R     EK +G+D  W+ AEN +      I  + +  + T V  GE AFYG
Sbjct: 415 DNYSAQISLRDPNNKEKYIGTDENWEKAENAI------ITAAKEKNLPTVVEHGEAAFYG 468

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK ++++KDA+GR WQ GTIQVD+NLP RF   Y+   ++   PVMIHRA FGS+ERFI 
Sbjct: 469 PKLDFMVKDALGRQWQLGTIQVDYNLPERFELSYIGPDNQAHRPVMIHRAPFGSMERFIA 528

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           I++EN  GNLPLWL+P    +  I+   VE+ +++ NLL    ++   D RNE    KIR
Sbjct: 529 ILLENTAGNLPLWLTPDVFTILPISEKYVEFGEKVLNLLAEQEINGLIDNRNEKTGKKIR 588

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  +KKIP ++I G+KE    ++ +R+ G     ++ + + I  + KE
Sbjct: 589 DAEVKKIPYMLIVGEKEEENGTVSVRKHGEGDLGEMKIEEFIQFVKKE 636


>gi|269986430|gb|EEZ92716.1| threonyl-tRNA synthetase [Candidatus Parvarchaeum acidiphilum
           ARMAN-4]
          Length = 635

 Score =  478 bits (1230), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 252/615 (40%), Positives = 392/615 (63%), Gaps = 24/615 (3%)

Query: 27  AESISRSL-AKKAVAVA-INGKVCDLSDPVRE-GSIEIITPEDPRSLAVIRHSCAHIMAE 83
           A  I+R L A K + VA ING++ DLS  ++E G I+  T +D     V  HS AHI+A 
Sbjct: 18  AIEIARELNAPKDIIVAEINGRLIDLSAEIKEDGEIKFFTFKDKTGKKVFWHSSAHILAT 77

Query: 84  AVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSH 143
           AV+ ++P+  + IGP I++GFYYD         ++L +IEK+M+ ++     F ++ +S 
Sbjct: 78  AVKRLYPDAVLGIGPAIDEGFYYDI-YNLKVGDNDLEKIEKEMENVVKEKLKFERKDISK 136

Query: 144 EKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKV 203
           E+A EL ++ K  +K+EI+E +    N+++YR GE++DLCRGPH+ ST  +    KL+KV
Sbjct: 137 EEAVELLKNNK--FKLEIIEGVNG--NLSIYRNGEFYDLCRGPHIPSTEYLGAV-KLLKV 191

Query: 204 AGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGS 263
           +GAYW+GD+ R +++RIYG ++ ++++L +YL  +EE ++ DH+K+ +E++LF  ++   
Sbjct: 192 SGAYWKGDNKREVMTRIYGISFPSKKDLEEYLKLIEERKEHDHKKIGKELELFEFSDLSP 251

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK 322
           G  F+  KG  I+  L+ + +   K  DY EI TP +    LW+ SGH+D Y+ NMF V 
Sbjct: 252 GSPFFTTKGTIIYNELLKFAKELDKKYDYTEIITPIIAKIDLWKISGHFDKYKENMFRVT 311

Query: 323 CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMR 382
             +        + LKPMNCP    +F    +SYR+LP+RL+++G ++R E  G+L GL+R
Sbjct: 312 PFESD----EEYGLKPMNCPFSALLFKSKTRSYRDLPMRLSDYGFLHRYELEGTLDGLLR 367

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWD 442
            R   Q+D+HV+ T+EQ+ +E +++ N++   YK F F+ IMV L+TRPEKR+G +ALWD
Sbjct: 368 TRLMEQNDSHVYVTEEQIESEIIRMFNILDDTYKPFNFKPIMV-LATRPEKRIGEEALWD 426

Query: 443 DAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGR---DWQCGTIQVD 499
            AE I+KG LD  K   +  I  G    +GAFYGPK +  + D  GR    +   TIQ+D
Sbjct: 427 KAEGILKGALD--KKGYKYEIKEG----DGAFYGPKIDIYVLDFSGRVEDAYAVSTIQLD 480

Query: 500 FNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTT 559
           FNL  RF+A Y+   +++  P++IHR++ G+I RF+GI++EN KG LP+WL+P+Q  V T
Sbjct: 481 FNLAVRFDAKYIGKDNKEHFPIVIHRSIMGTIGRFMGIILENLKGELPVWLAPVQVKVLT 540

Query: 560 ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSI 619
           IT    EYA+ I   LK +++  E+D  N T++YKIR+  ++KIP II+ GDKE  +++I
Sbjct: 541 ITERNNEYAEGIIKKLKDNNIREESDIENGTLDYKIRKAQLEKIPFIIVIGDKEEEKKTI 600

Query: 620 GIRRFGSTTTQKVSL 634
            +R     T   V +
Sbjct: 601 AVRNRKGKTRYNVDI 615


>gi|269302597|gb|ACZ32697.1| threonyl-tRNA synthetase [Chlamydophila pneumoniae LPCoLN]
          Length = 635

 Score =  478 bits (1230), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 255/625 (40%), Positives = 377/625 (60%), Gaps = 23/625 (3%)

Query: 15  KNFPV--HATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLA 71
           KN+ V    T +++A+ +  S   + + V IN +  DLS  + EG ++  +T EDP    
Sbjct: 9   KNYEVLEGTTAAELAKQLKNS--HQFIGVLINERPRDLSTHLNEGDTLVFLTSEDPEGRE 66

Query: 72  VIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIA 131
           +  H+ AH++A+AV  +WP+    IGP+I+ GFYYDF      S  +   IE  +++I+ 
Sbjct: 67  IFLHTSAHLLAQAVLRLWPDAIPTIGPVIDHGFYYDF-ANLSISESDFPLIEDTVKQIVD 125

Query: 132 RDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRST 191
            +   + ++   +K + L +  +  +K E++  +P  E ++ Y QGE+FDLCRGPH+ ST
Sbjct: 126 -EKLTISRFTYGDKQQALAQFPQNPFKTELIRELPENEEISAYSQGEFFDLCRGPHLPST 184

Query: 192 GQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAR 251
             VK F K+++ + AYWRGD +R  L RIYGT++ T +EL  +L  +EE++KRDHR L  
Sbjct: 185 AHVKAF-KVLRTSAAYWRGDPSRESLVRIYGTSFPTSKELRAHLEQIEEAKKRDHRVLGA 243

Query: 252 EMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGH 310
           ++DLF   E   G+ F+H +G  ++  LI Y ++      Y+EI TPQ++++ LW+ SGH
Sbjct: 244 KLDLFSQQESSPGMPFFHPRGMIVWDALIRYWKQLHTAAGYKEILTPQLMNRQLWEVSGH 303

Query: 311 WDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYR 370
           WD+Y+ANM+ ++  D+       +A+KPMNCPG +  +   L SY+E P+R+AE G V+R
Sbjct: 304 WDNYKANMYTLQIDDED------YAIKPMNCPGCMLYYKTRLHSYKEFPLRVAEIGHVHR 357

Query: 371 NEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR 430
            E SG+L GLMRVR F QDDAHVF T EQ+  E L I  L+ ++Y  FG E   ++LSTR
Sbjct: 358 QEASGALSGLMRVRAFHQDDAHVFLTPEQVEEETLNILQLVSTLYGTFGLE-YHLELSTR 416

Query: 431 PEK-RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGR 489
           PEK  +G D+LW+ A + +   L       Q      V  GEGAFYGPK +  +KDAI R
Sbjct: 417 PEKDTIGDDSLWELATDALNRAL------VQSGTPFIVRPGEGAFYGPKIDIHVKDAIQR 470

Query: 490 DWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW 549
            WQCGTIQ+D  LP RF   Y  +   K  PVM+HRA+FGSIERF+GI+IENFKG  PLW
Sbjct: 471 TWQCGTIQLDMFLPERFELEYTTAQGTKSVPVMLHRALFGSIERFLGILIENFKGRFPLW 530

Query: 550 LSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIIC 609
           LSP Q  + T+    +  A+E+    K   L +  D  +E+++ KIR     ++  +I  
Sbjct: 531 LSPEQVRIITVADRHIPGAKELEEAWKRLGLVVTLDDSSESVSKKIRNAQNMQVNYMITL 590

Query: 610 GDKEASERSIGIRRFGSTTTQKVSL 634
           GD E +E  + +R   +     VS+
Sbjct: 591 GDHEINENVLAVRTRDNRVINDVSV 615


>gi|15618715|ref|NP_225001.1| threonyl-tRNA synthetase [Chlamydophila pneumoniae CWL029]
 gi|15836339|ref|NP_300863.1| threonyl-tRNA synthetase [Chlamydophila pneumoniae J138]
 gi|16752234|ref|NP_445602.1| threonyl-tRNA synthetase [Chlamydophila pneumoniae AR39]
 gi|33242166|ref|NP_877107.1| threonyl-tRNA synthetase [Chlamydophila pneumoniae TW-183]
 gi|8928382|sp|Q9Z7A0|SYT_CHLPN RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|4377117|gb|AAD18944.1| Threonyl tRNA Synthetase [Chlamydophila pneumoniae CWL029]
 gi|7189978|gb|AAF38837.1| threonyl-tRNA synthetase [Chlamydophila pneumoniae AR39]
 gi|8979180|dbj|BAA99014.1| threonyl tRNA synthetase [Chlamydophila pneumoniae J138]
 gi|33236677|gb|AAP98764.1| threonyl-tRNA synthetase [Chlamydophila pneumoniae TW-183]
          Length = 635

 Score =  478 bits (1230), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 255/625 (40%), Positives = 377/625 (60%), Gaps = 23/625 (3%)

Query: 15  KNFPV--HATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLA 71
           KN+ V    T +++A+ +  S   + + V IN +  DLS  + EG ++  +T EDP    
Sbjct: 9   KNYEVLEGTTAAELAKQLKNS--HQFIGVLINERPRDLSTHLNEGDTLVFLTSEDPEGRE 66

Query: 72  VIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIA 131
           +  H+ AH++A+AV  +WP+    IGP+I+ GFYYDF      S  +   IE  +++I+ 
Sbjct: 67  IFLHTSAHLLAQAVLRLWPDAIPTIGPVIDHGFYYDF-ANLSISESDFPLIEDTVKQIVD 125

Query: 132 RDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRST 191
            +   + ++   +K + L +  +  +K E++  +P  E ++ Y QGE+FDLCRGPH+ ST
Sbjct: 126 -EKLAISRFTYGDKQQALAQFPQNPFKTELIRELPENEEISAYSQGEFFDLCRGPHLPST 184

Query: 192 GQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAR 251
             VK F K+++ + AYWRGD +R  L RIYGT++ T +EL  +L  +EE++KRDHR L  
Sbjct: 185 AHVKAF-KVLRTSAAYWRGDPSRESLVRIYGTSFPTSKELRAHLEQIEEAKKRDHRVLGA 243

Query: 252 EMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGH 310
           ++DLF   E   G+ F+H +G  ++  LI Y ++      Y+EI TPQ++++ LW+ SGH
Sbjct: 244 KLDLFSQQESSPGMPFFHPRGMIVWDALIRYWKQLHTAAGYKEILTPQLMNRQLWEVSGH 303

Query: 311 WDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYR 370
           WD+Y+ANM+ ++  D+       +A+KPMNCPG +  +   L SY+E P+R+AE G V+R
Sbjct: 304 WDNYKANMYTLQIDDED------YAIKPMNCPGCMLYYKTRLHSYKEFPLRVAEVGHVHR 357

Query: 371 NEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR 430
            E SG+L GLMRVR F QDDAHVF T EQ+  E L I  L+ ++Y  FG E   ++LSTR
Sbjct: 358 QEASGALSGLMRVRAFHQDDAHVFLTPEQVEEETLNILQLVSTLYGTFGLE-YHLELSTR 416

Query: 431 PEK-RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGR 489
           PEK  +G D+LW+ A + +   L       Q      V  GEGAFYGPK +  +KDAI R
Sbjct: 417 PEKDTIGDDSLWELATDALNRAL------VQSGTPFIVRPGEGAFYGPKIDIHVKDAIQR 470

Query: 490 DWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW 549
            WQCGTIQ+D  LP RF   Y  +   K  PVM+HRA+FGSIERF+GI+IENFKG  PLW
Sbjct: 471 TWQCGTIQLDMFLPERFELEYTTAQGTKSVPVMLHRALFGSIERFLGILIENFKGRFPLW 530

Query: 550 LSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIIC 609
           LSP Q  + T+    +  A+E+    K   L +  D  +E+++ KIR     ++  +I  
Sbjct: 531 LSPEQVRIITVADRHIPRAKELEEAWKRLGLVVTLDDSSESVSKKIRNAQNMQVNYMITL 590

Query: 610 GDKEASERSIGIRRFGSTTTQKVSL 634
           GD E +E  + +R   +     VS+
Sbjct: 591 GDHEINENVLAVRTRDNRVINDVSV 615


>gi|281423114|ref|ZP_06254027.1| threonine--tRNA ligase [Prevotella oris F0302]
 gi|281402450|gb|EFB33281.1| threonine--tRNA ligase [Prevotella oris F0302]
          Length = 649

 Score =  478 bits (1230), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 247/631 (39%), Positives = 386/631 (61%), Gaps = 19/631 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           +K+TFPDGS++ +    TG  +AESIS +LA+  V+  +NG+  +L+ P+ E   I +  
Sbjct: 2   VKITFPDGSVREYEQGVTGLQIAESISPALARNVVSCGVNGETVELNRPINEDAKIALYK 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF--DKEQPFSSDELAQ 121
            +D        H+ AH++AEA+Q ++P +Q   GP +E GF+YD    K Q  S ++  +
Sbjct: 62  FDDEEGKHTFWHTSAHLLAEALQELYPGIQFGFGPAVESGFFYDVMPPKGQTISENDFPK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE KM E+  +D P +++ +S   A + F++  + YK E +E       ++ Y QG + D
Sbjct: 122 IEAKMLELAKKDEPVVRKNISKSDALQEFQADGQTYKCEHIEQDLEDGTISTYTQGHFTD 181

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ STG +K   K+  VAGA+WRGD+ R  ++RIYG  +  ++ L +YL  LEE+
Sbjct: 182 LCRGPHLMSTGLIKAV-KITSVAGAFWRGDAKREQMTRIYGITFPKKKLLDEYLVMLEEA 240

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQV 299
           +KRDHRK+ +EM+LF  ++  G G+  W  KG ++   L   +R  ++  +Y+E+ TP +
Sbjct: 241 KKRDHRKIGKEMELFMFSDRVGKGLPIWLPKGTQLRLRLQELLRSLLRPYNYQEVITPGI 300

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             + L+  SGH+  Y  + F       T ++   + LKPMNCP H  V+    +SY++LP
Sbjct: 301 GGKSLYVTSGHYAHYGKDAFQ---PIHTPEEDEEYMLKPMNCPHHCEVYARKPRSYKDLP 357

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AEFG+V+R E SG LHGL RVR FTQDDAH+F   +Q+  E     ++I+ ++K F 
Sbjct: 358 LRIAEFGTVFRYEKSGELHGLTRVRTFTQDDAHIFVRPDQVKAEFETNIDIILKVFKTFQ 417

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           F+    ++S R     EK +GSD +W++++N ++         +++ I      GE AFY
Sbjct: 418 FDNYEAQISLRDPKDKEKYIGSDEIWEESQNAIREACKEKGLVAREEI------GEAAFY 471

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDAIGR WQ GTIQVD+NLP+RF   Y    + K  PVMIHRA FGS+ERF 
Sbjct: 472 GPKLDFMVKDAIGRKWQLGTIQVDYNLPARFKLEYTAEDNTKKTPVMIHRAPFGSLERFT 531

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE+  G+ PLWL+P Q  +  I+    +YA++++    S  +    D RNE I  KI
Sbjct: 532 AVLIEHTAGHFPLWLTPDQVAILPISEKYNDYAKQVSKYFDSVGVRAVIDDRNEKIGRKI 591

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGS 626
           R++ +K+IP ++I G+KEA+E  + +R+ G 
Sbjct: 592 RDNELKRIPYMVIVGEKEAAEGLVSMRKQGG 622


>gi|139437031|ref|ZP_01771191.1| Hypothetical protein COLAER_00165 [Collinsella aerofaciens ATCC
           25986]
 gi|133776678|gb|EBA40498.1| Hypothetical protein COLAER_00165 [Collinsella aerofaciens ATCC
           25986]
          Length = 611

 Score =  478 bits (1230), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 240/563 (42%), Positives = 354/563 (62%), Gaps = 18/563 (3%)

Query: 72  VIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ--PFSSDELAQIEKKMQEI 129
           VIRHS AHIMA+A++ ++P+   A GP  ++GFYYD D  +    S D+   IE +M++I
Sbjct: 45  VIRHSAAHIMAQAIKRLYPQADFAYGPATDNGFYYDVDLPEGVKISEDDFPAIEAEMKKI 104

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
           +  +  F        +A  L E + E YKVE +  +     +T Y+QG++ D+C GPH+ 
Sbjct: 105 VKENLKFSVYEKPRAEAIALMEERGEKYKVEHIGDLDDDARITFYQQGDYIDMCVGPHIC 164

Query: 190 STGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKL 249
            T  +K F KL  V+GAYW+GD +  ML+RI G A+ T++EL ++++ LEE++KRDHRK+
Sbjct: 165 YTKALKAF-KLTGVSGAYWKGDKDNKMLTRINGVAFATKEELDEHMHMLEEAKKRDHRKI 223

Query: 250 AREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQS 308
            REMDLF + ++  G  F+   G  +  TL+ Y R    K  Y EI+TP ++++ LW+ S
Sbjct: 224 GREMDLFMMRDEAPGFPFFLPNGMILKNTLLDYWREIHHKAGYVEISTPLIMNKQLWKTS 283

Query: 309 GHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV 368
           GHWD Y+ NM++      T+ D   + +KPMNCPG V V+     SYRELP+R  E G V
Sbjct: 284 GHWDHYKDNMYS------TVIDDEEYCIKPMNCPGGVLVYASKPHSYRELPIRAGEIGLV 337

Query: 369 YRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLS 428
           +R+E  G+LHGL RVR F QDDAH+F   +Q+ +E + + NLI S+Y+ FGF K  V+LS
Sbjct: 338 HRHELRGALHGLFRVRCFNQDDAHLFVRPDQLTDEIVGVVNLIDSVYQKFGF-KYHVELS 396

Query: 429 TRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIG 488
           TRPE  +GSD  W  AE  ++  L+ +       ++  V  G+GAFYGPK ++ L+D++G
Sbjct: 397 TRPEDSMGSDEDWARAEEGLRTALEQL------HMDYEVNEGDGAFYGPKIDFHLEDSLG 450

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPL 548
           R WQCGT+Q+DF +P  F+  YV++   K  P+M+HR  FGSIERFIGI+IE+F G  P 
Sbjct: 451 RTWQCGTVQLDFQMPLNFDLEYVDADGTKKRPIMLHRVCFGSIERFIGILIEHFAGKFPT 510

Query: 549 WLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE-HSIKKIPIII 607
           WL+P+Q     ++  + +YA E+   L+   + +  D R+E I YKIRE  SI ++P ++
Sbjct: 511 WLAPVQVKALPVSEKSRDYAHEVCAKLEEAGIRVVCDDRDEKIGYKIREARSIDRVPYML 570

Query: 608 ICGDKEASERSIGIRRFGSTTTQ 630
           I G+KE    +I +R   + T Q
Sbjct: 571 ILGEKEVEAGNISVRDRSNETVQ 593


>gi|319954103|ref|YP_004165370.1| ser-tRNA(thr) hydrolase ;threonyl-tRNA synthetase [Cellulophaga
           algicola DSM 14237]
 gi|319422763|gb|ADV49872.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Cellulophaga
           algicola DSM 14237]
          Length = 646

 Score =  478 bits (1229), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 261/648 (40%), Positives = 393/648 (60%), Gaps = 19/648 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+T PDGSI+     +T  DVA+SIS   A+  ++   N  V +++ P+ E GS+ + +
Sbjct: 2   IKITLPDGSIRECEKGSTPMDVAKSISEGFARNVISAKFNDTVLEVTTPLLEDGSLVLYS 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQI 122
             D        HS +H++A+A++ ++P V++ IGP I++GFYYD D  +   S  +   I
Sbjct: 62  WNDAAGKKAFWHSSSHVVAQAIEELYPGVKLTIGPAIDNGFYYDIDLGDTSISDKDFPAI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EKK  EI      F    +S   A + ++ +   YKVE++E++     +T      + DL
Sbjct: 122 EKKAIEIARGKHNFKMHPVSKAAALQKYKEQGNEYKVELIENL-EDGTITFCDHDTFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRG H+ +TG +K   K++ VAGAYWRGD N+P L+RIYG ++  Q+ELT+YL  LE+++
Sbjct: 181 CRGGHIPNTGIIKAI-KILSVAGAYWRGDENKPQLTRIYGISFPKQKELTEYLELLEQAK 239

Query: 243 KRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           +RDHRKL +E++LF   A+ G G+  W  KG  + + L  ++++ + K  YE + TP + 
Sbjct: 240 QRDHRKLGKELELFTFSAKVGQGLPLWLPKGAALRERLEDFLKKAQKKAGYEMVITPHIG 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            + L+  SGH+  Y A+ F       T K    F LKPMNCP H  V+N    SY++LP 
Sbjct: 300 QKELYVTSGHYAKYGADSFQ---PIKTPKMDEEFLLKPMNCPHHCEVYNFKPHSYKDLPK 356

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R AEFG+VYR E SG LHGL RVRGFTQDDAH+FCT +Q+  E   + +L + +    GF
Sbjct: 357 RFAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCTPDQLDEEFKNVIDLSLYVLGSLGF 416

Query: 421 EKIMVKLS----TRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           +    ++S    T+PEK +GS   W+ AE+ +      I  +++  +N  +  GE AFYG
Sbjct: 417 DNFTAQVSVRDLTKPEKYIGSVENWEKAESAI------INAATEKGLNFVIESGEAAFYG 470

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK ++++KDA+GR WQ GTIQVD+NLP RF+  Y  S +E   PVMIHRA FGS+ERFI 
Sbjct: 471 PKLDFMVKDALGRQWQLGTIQVDYNLPERFDLTYKGSDNELHRPVMIHRAPFGSMERFIA 530

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +++E+  GN PLWL P QAI+  ++    +YA+++   L+ H +    D RNET+  KIR
Sbjct: 531 LLLEHTGGNFPLWLIPEQAIILPVSEKHEKYAEKVLKSLEKHEIRALVDKRNETVGKKIR 590

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           E  + K+P ++I G+ E +E +I +RR G      +++ D   ++T E
Sbjct: 591 EAEMNKLPFMLIVGENEEAEETISVRRHGGEDLGSITISDFNELVTTE 638


>gi|16331761|ref|NP_442489.1| threonyl-tRNA synthetase [Synechocystis sp. PCC 6803]
 gi|2501062|sp|Q55806|SYT_SYNY3 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|1001722|dbj|BAA10559.1| threonyl-tRNA synthetase [Synechocystis sp. PCC 6803]
          Length = 603

 Score =  477 bits (1228), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 242/578 (41%), Positives = 364/578 (62%), Gaps = 18/578 (3%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           L  IRH+ +H+MA AVQ ++P+ QV IGP  E GFYYDFD  +PF+  +L  I+K+M +I
Sbjct: 22  LKKIRHTTSHVMAMAVQKLFPKAQVTIGPWTETGFYYDFDVAEPFTEADLKAIKKEMVKI 81

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG-EWFDLCRGPHV 188
           I +  P +++ +S E+A++  ES +E YK+EIL+SI   E +T+Y  G +W+DLC GPH+
Sbjct: 82  INKKLPVIREEISREEAKQRIESIQEPYKLEILDSI--HEPITVYHLGDQWWDLCAGPHL 139

Query: 189 RSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHR 247
            ST  +  K   L  VAGAYWRGD+N+  L RIYGTAW T ++L +Y    EE+ KRDHR
Sbjct: 140 ESTADINPKAIALESVAGAYWRGDANKAQLQRIYGTAWETPEQLAEYQRRKEEALKRDHR 199

Query: 248 KLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLW 305
           KL +E+ LF  A+  G G+  W  KG  I   L  ++++ +IK  Y  + TP +    L+
Sbjct: 200 KLGKELGLFIFADPVGPGLPLWTPKGTIIRTILEDFLKQEQIKRGYLPVVTPHIARVDLF 259

Query: 306 QQSGHWDSYRANMFAV--KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           +QSGHW  Y+ +MF +  +  ++  +++  F LKPMNCP H+ ++   L+SYR+LP+RLA
Sbjct: 260 KQSGHWQKYQEDMFPMMAESPEEAAQEM-GFVLKPMNCPFHIQIYKSELRSYRDLPLRLA 318

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFG+VYR E SG L GL RVRGFT DD+H+F T +Q+  E L + +LI++++K    +  
Sbjct: 319 EFGTVYRYEQSGELGGLTRVRGFTVDDSHLFVTPDQLDEEFLSVVDLILTVFKSLQLKNF 378

Query: 424 MVKLSTR-PE--KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
             +LS R PE  K +GSD  W+ A+  ++  +  ++      ++     GE AFYGPK +
Sbjct: 379 KARLSFRDPESDKYIGSDEAWEKAQGAIRRAVQELE------MDYFEAPGEAAFYGPKLD 432

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           +I +DA+ R+WQ GT+QVD+NLP RF+  Y+ +   +  PVMIHRA FGS+ER IGI+IE
Sbjct: 433 FIFQDALEREWQLGTVQVDYNLPERFDLEYIAADGSRQRPVMIHRAPFGSLERLIGILIE 492

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
            + G+ PLWL+PIQ  +  ++   + +AQ I   ++S  L  E D   + +   IR    
Sbjct: 493 EYAGDFPLWLAPIQVRLLAVSDEFLPFAQSIVQQMQSLGLRAEVDTSGDRLGKMIRNAEK 552

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           +KIP++ + G KE    ++ IR   S    ++ + + +
Sbjct: 553 QKIPVMAVIGAKEVEANALNIRTRASGELGEIPVTEVL 590


>gi|242309942|ref|ZP_04809097.1| threonyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489]
 gi|239523239|gb|EEQ63105.1| threonyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489]
          Length = 605

 Score =  477 bits (1228), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 242/557 (43%), Positives = 350/557 (62%), Gaps = 19/557 (3%)

Query: 69  SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQE 128
           SL+++RH+CAH+MAEA++S++PE Q  +GP++E+GFYYDF   Q  S ++L  IE KM+E
Sbjct: 37  SLSIMRHTCAHLMAEAIKSLYPEAQFFVGPVVEEGFYYDFRVNQKISEEDLKNIESKMKE 96

Query: 129 IIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWFDLCRGPH 187
           I  +     K YL  +KA E F  K +  K  ++  IP  +  +++Y QG++ DLCRGPH
Sbjct: 97  IAKKGEKITKYYLPRDKAIEKF--KNDDLKQAVISRIPEGDGRLSIYSQGDFEDLCRGPH 154

Query: 188 VRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHR 247
           +  T ++   FKL K+AGAY  GD    ML RIYG A+  ++ L QYL+ +EE++KRDHR
Sbjct: 155 L-PTLKLLNAFKLTKIAGAYLGGDEKAEMLVRIYGIAFADKESLNQYLHQMEEAKKRDHR 213

Query: 248 KLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLW 305
           K+  EM+LF   E+ G+G+  W  KG ++ + + + + +  I+  YE +  P++L   +W
Sbjct: 214 KVGTEMELFTFDEEIGAGLPIWLPKGSRLRRNIENLLTKALIQRGYEPVRGPEILKSAVW 273

Query: 306 QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEF 365
           + SGH+ +Y  NM+       T  D   + +KPMNC GH+ V+   L+SYRELP+R  E+
Sbjct: 274 KTSGHYANYGENMYF------TTIDGVEYGIKPMNCVGHIKVYQSALRSYRELPLRFYEY 327

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
           G V+R+E SG LHGL+RVR FTQDDAH+FC   Q+  E   I +    I   FGF   M 
Sbjct: 328 GVVHRHEKSGVLHGLLRVREFTQDDAHIFCRPSQIGIEVENIIDFTKKIMDSFGFSYEM- 386

Query: 426 KLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKD 485
           ++STRP+K +GSD +W++A   +K  L+         I   +  G GAFYGPK +  + D
Sbjct: 387 EISTRPQKSIGSDEVWEEATEALKNALNRCN------IPYKIDEGGGAFYGPKIDIKITD 440

Query: 486 AIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           AIGR WQCGT+Q+D NLP RF   Y + ++    PVMIHRA+ GS ERFI I+ E+F G 
Sbjct: 441 AIGRKWQCGTVQIDMNLPDRFKLEYTDENNSSKQPVMIHRAILGSFERFIAILTEHFGGE 500

Query: 546 LPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPI 605
            P +++P QAI+  I  S   YA+E+ N L +  +  E D +NET+N +IR    +++P+
Sbjct: 501 FPFFIAPTQAIIIPIGESQESYAKELRNALLNVGVYTEIDNKNETLNKRIRNAEKQRVPM 560

Query: 606 IIICGDKEASERSIGIR 622
           I+I G KE  ER I IR
Sbjct: 561 ILILGAKEQEERIIAIR 577


>gi|17227831|ref|NP_484379.1| threonyl-tRNA synthetase [Nostoc sp. PCC 7120]
 gi|17129680|dbj|BAB72293.1| threonyl-tRNA synthetase [Nostoc sp. PCC 7120]
          Length = 615

 Score =  477 bits (1228), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 245/580 (42%), Positives = 358/580 (61%), Gaps = 21/580 (3%)

Query: 69  SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQE 128
           +L  IRH+ +H+MA AVQ ++P+ QV IGP IE+GFYYDFD  +PF+  +L  I+K+M +
Sbjct: 32  TLKKIRHTASHVMAMAVQKLFPKAQVTIGPWIENGFYYDFDSPEPFTDKDLKAIQKEMVK 91

Query: 129 IIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG-EWFDLCRGPH 187
           II R  P +++ +S E+A    +  KE YK+EIL  I + E +T+Y  G EW+DLC GPH
Sbjct: 92  IINRKLPVVREEVSREEAERRIQEIKEPYKLEILADIKS-EPITIYHLGNEWWDLCAGPH 150

Query: 188 VRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDH 246
           V +T  +  K  +L  VAGAYWRGD  +  L RIY TAW T ++L +Y    EE+ +RDH
Sbjct: 151 VENTKDLNPKAIELESVAGAYWRGDETKAQLQRIYATAWETPEQLAEYKRRKEEALRRDH 210

Query: 247 RKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHL 304
           RKL +E+ LF  +E  G G+  W  KG  +  TL  ++++ ++K  Y  + TP +    L
Sbjct: 211 RKLGKELGLFIFSEQVGPGLPLWTPKGTLLRSTLEQFLQQEQLKRGYLPVVTPHIARVDL 270

Query: 305 WQQSGHWDSYRANMFAV-KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           ++ SGHW  Y+ +MF +    +      + F LKPMNCP H+ ++   L+SYRELP+RLA
Sbjct: 271 FKTSGHWQKYKEDMFPLMAEDEAAAAIEQGFVLKPMNCPFHIQIYKSELRSYRELPMRLA 330

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFG+VYR E SG L GL RVRGFT DD+H+F T EQ+ NE L + +LI+S++K    +  
Sbjct: 331 EFGTVYRYEQSGELGGLTRVRGFTVDDSHLFVTPEQLDNEFLNVVDLILSVFKSLQLKNF 390

Query: 424 MVKLSTR---PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
             +LS R    +K +GSD +W+ AE  ++  ++ +     + I      GE AFYGPK +
Sbjct: 391 KARLSFRDPASDKYIGSDEVWNKAEGAIRRAVEQLGMEHFEGI------GEAAFYGPKLD 444

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           +I  DA+ R+WQ GT+QVD+NLP RF+  YV     +  PVMIHRA FGS+ER IGI+IE
Sbjct: 445 FIFSDALEREWQLGTVQVDYNLPERFDLEYVAEDGTRKRPVMIHRAPFGSLERLIGILIE 504

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
            + G+ PLWL+P+QA +  +  + +++ +++   L+S  +  E D   + +   IR    
Sbjct: 505 EYAGDFPLWLAPVQARLLPVGEAQLDFTKDVVAKLRSLGIRAEVDTSGDRLGKLIRNAEK 564

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
            KIP++ + G KE    S+ IR      T+    L AIP+
Sbjct: 565 DKIPVMAVVGAKEVETNSLSIR------TRASGELGAIPV 598


>gi|203288149|ref|YP_002223164.1| threonyl-tRNA synthetase [Borrelia recurrentis A1]
 gi|238690577|sp|B5RQ59|SYT_BORRA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|201085369|gb|ACH94943.1| threonyl-tRNA synthetase [Borrelia recurrentis A1]
          Length = 583

 Score =  477 bits (1228), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 242/569 (42%), Positives = 356/569 (62%), Gaps = 17/569 (2%)

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           RHS AH+MAEAV  ++P  ++AIGP I+DGFYYDFD E+  S D+L  IE KM+EI+   
Sbjct: 15  RHSIAHVMAEAVLELFPNTKIAIGPPIKDGFYYDFDFEKHISEDDLLLIEHKMREILKTG 74

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQ 193
           SPF+++ ++ E+A  LF  K E YK++++++    + +T+Y+  ++ DLCRGPHV +  +
Sbjct: 75  SPFIREVITREQALVLF--KDEPYKIDLIQNFDVTDEITIYKSHKFTDLCRGPHVDNMNK 132

Query: 194 VK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLARE 252
           +  K FKL  +AGAYWRG+    MLSRIYGT WN +++L  YL   EE +KRDHRKL RE
Sbjct: 133 LDPKAFKLTSIAGAYWRGNERNKMLSRIYGTLWNNEKDLKAYLKLQEEIKKRDHRKLGRE 192

Query: 253 MDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGH 310
           ++LF + ++ G G+IF+H  G +I   + ++ R +  K+ Y+ + TP +    LW+ SGH
Sbjct: 193 LNLFSVHDEIGPGLIFFHPHGARIRALIENFWREEHFKNGYDILFTPHIGKSWLWETSGH 252

Query: 311 WDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYR 370
            D Y+ +MF     +    D   + +KPMNCP H+A++N    SYR+LP R AE G+VYR
Sbjct: 253 LDFYKESMF-----EKIEMDRSDYYVKPMNCPFHIAIYNTDKHSYRDLPFRWAELGTVYR 307

Query: 371 NEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR 430
            E  G++HG MRVRGFTQDDAH+ CT EQ+  E  ++    I ++  FGF  +   LST+
Sbjct: 308 YEKIGAIHGTMRVRGFTQDDAHIICTYEQVNFEVREVLRFAIDMWNKFGFTNLKAYLSTK 367

Query: 431 PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRD 490
           PEK VG D  W  A  +++  L          I+  +  G GAFYGPK +  + D++GR 
Sbjct: 368 PEKAVGDDDDWQMAVKVLEKALIDFN------IDFDIDEGGGAFYGPKIDLKIIDSLGRA 421

Query: 491 WQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL 550
           WQ  TIQ DFNLP RF   Y     ++  P MIHRA+ GSIERF GI++E++ G  P+WL
Sbjct: 422 WQMTTIQFDFNLPVRFKMTYTAEDGKEKRPFMIHRALLGSIERFFGILVEHYGGAFPVWL 481

Query: 551 SPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FRNETINYKIREHSIKKIPIIIIC 609
           +P+Q ++  + S   EYA E+ +  ++  + I+ D + N  +N KIR++  KK+P + I 
Sbjct: 482 APLQVVIIPVNSIVEEYALEVLSRFQNEGIRIKFDNYYNMRMNAKIRQYQSKKVPYMFII 541

Query: 610 GDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           G++E  E  I IR   +     + L +A+
Sbjct: 542 GEREVVEGKISIRTRTNEQINGLELKEAL 570


>gi|170781142|ref|YP_001709474.1| threonyl-tRNA synthetase [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|169155710|emb|CAQ00831.1| threonine-tRNA synthetase [Clavibacter michiganensis subsp.
           sepedonicus]
          Length = 684

 Score =  477 bits (1227), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 259/662 (39%), Positives = 384/662 (58%), Gaps = 51/662 (7%)

Query: 18  PVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI-EIITPEDPRSLAVIRHS 76
           PV AT +    ++    A   VA+ I+G++ DL+  V  G + E +  + P  LA++RHS
Sbjct: 22  PVEATEAGTGFTLFSDRA--VVAMRIDGELKDLAAEVAPGDVVEPVRIDSPDGLAILRHS 79

Query: 77  CAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPF 136
            AH+MA+AVQ I PE ++ IGP + DGFY+DFD  +PF+ ++L  I K M+ I+ +   F
Sbjct: 80  AAHVMAQAVQQINPEAKLGIGPPVTDGFYFDFDVAEPFTPEDLKAISKNMERIVRQGQRF 139

Query: 137 LKQYLSHEKARELFESKKEAYKVEIL--------------ESIP-AKENVTLY-----RQ 176
            ++ +S E+AREL  +  E YK+E++              ES+      +T+Y     + 
Sbjct: 140 TRRVVSEEEARELMAA--EPYKLELIGLKGGSSDELGEDGESVEVGGAELTVYENVDGKT 197

Query: 177 GE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
           GE  W DLCRGPH+ ST  V   + L +VA AYWRG    P L RIYGTAW T+ EL  Y
Sbjct: 198 GEVFWRDLCRGPHLPSTRMVGNGWALSRVAAAYWRGSEKNPQLQRIYGTAWPTKDELRAY 257

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYE 292
              +EE+ KRDHR+L  E+DLF   ++ GSG+  +H KG  I + +  Y RR+ +   YE
Sbjct: 258 QGRIEEALKRDHRRLGAELDLFSFPDEIGSGLAVFHPKGGIIRREMEDYSRRRHETAGYE 317

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL-------RTFALKPMNCPGHV 345
            + +P +   +L++ SGH D Y+  MF     D+   D          + LKPMNCP HV
Sbjct: 318 FVYSPHITKSNLFETSGHLDFYKDGMFPAMHLDEARNDEGEITRQGADYYLKPMNCPMHV 377

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            ++    +SYRELP+RL EFG+VYRNE SG +HGL RVRG TQDDAH+F T+E+M +E  
Sbjct: 378 LIYRSRQRSYRELPLRLFEFGTVYRNEKSGVIHGLTRVRGMTQDDAHIFTTRERMADELK 437

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTR-PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
                ++S+ +D+G +   ++LST+ PEK VGSD +W++A   ++ V           ++
Sbjct: 438 GTLEFVLSLLRDYGLDDFYLELSTKDPEKFVGSDEVWEEATETLRQVA----------VD 487

Query: 465 TGVLL----GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHP 520
           TG+ L       AFYGPK     +DAIGR WQ  TIQ+DFNLP RF   Y  +   +  P
Sbjct: 488 TGLELVPDPAGAAFYGPKISVQARDAIGRTWQMSTIQLDFNLPERFGLEYTANDGTRKQP 547

Query: 521 VMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHL 580
           VMIHRA+FGSIERF G++ E++ G  P+WLSP+Q +   +     EY   + + L++  +
Sbjct: 548 VMIHRALFGSIERFFGVLTEHYAGAFPVWLSPVQVVGIPVAEDYEEYLGGVLDRLRAEGV 607

Query: 581 SIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
            ++ D  ++ +  KIR H+  ++P  +I G+ + +  S+  R    T    V + +A+  
Sbjct: 608 RVQLDTSDDRMPKKIRTHTKARVPYQLIAGEDDRAAGSVSFRFRDGTQVNGVPVAEAVER 667

Query: 641 LT 642
           +T
Sbjct: 668 IT 669


>gi|296129629|ref|YP_003636879.1| threonyl-tRNA synthetase [Cellulomonas flavigena DSM 20109]
 gi|296021444|gb|ADG74680.1| threonyl-tRNA synthetase [Cellulomonas flavigena DSM 20109]
          Length = 670

 Score =  477 bits (1227), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 261/659 (39%), Positives = 375/659 (56%), Gaps = 55/659 (8%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
           MP  I LT  DG   +     TG+++      +  +  V V ++G++ DL+ P+  G+ +
Sbjct: 1   MPEQITLTV-DGVETSVAQGTTGTELF-----ADRRDVVVVRVDGELTDLAAPLAAGTTV 54

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           E +T + P  LAV+RHS AH++A+AVQ I P+ ++ IGP I DGFYYDFD E PF+ ++L
Sbjct: 55  EAVTIDSPDGLAVLRHSAAHVLAQAVQEINPKARLGIGPPITDGFYYDFDVETPFTPEDL 114

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEI------------------ 161
             IEK M  I+     F +  ++  +ARE  E   E YK+E+                  
Sbjct: 115 TAIEKVMGRIVKEGQTFRRWEVTEAQARE--ELAAEPYKLELIGLKGEAGDTDGASVEVG 172

Query: 162 LESIPAKENV-TLYRQGE---WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPML 217
           L  +   +NV    R+ E   W DLCRGPH+ ST  +   F+L + A AYWRG    P L
Sbjct: 173 LGGLSIYQNVRGAGRESEAVVWQDLCRGPHLPSTRLIGNGFQLTRSAAAYWRGSEKNPQL 232

Query: 218 SRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIF 276
            R+YGTAW T+ EL  YL  + E+E+RDHRKL  E+DLF   E+ GSG+  +H KG  I 
Sbjct: 233 QRVYGTAWPTKDELKAYLERIAEAERRDHRKLGNELDLFSFPEEIGSGLAVFHPKGGIIR 292

Query: 277 QTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADD-------TI 328
             +  Y RR+ ++  Y  +N+P +  + L+Q SGH D Y   M+     D+         
Sbjct: 293 MEMEEYSRRRHVQAGYSFVNSPHITKEQLFQISGHLDWYADGMYPPMQLDEERDAEGHVK 352

Query: 329 KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQ 388
           +  + + LKPMNCP H  +F    +SYRELP+RL EFG+VYR E SG +HG+ R RGFTQ
Sbjct: 353 RQGQNYYLKPMNCPMHNLIFAARGRSYRELPLRLFEFGTVYRYEKSGVVHGMTRARGFTQ 412

Query: 389 DDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR-PEKRVGSDALWDDAENI 447
           DDAH++CT+EQM +E   +   ++ + KD+G +   ++LSTR PEK VGSD +WD+A   
Sbjct: 413 DDAHIYCTREQMKDELTSLLTFVLDLLKDYGLDDFYLELSTRNPEKSVGSDDVWDEATET 472

Query: 448 MKGVLDTIKNSSQDRINTGVLL----GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLP 503
           ++ V +           +G+ L    G  AFYGPK     KDAIGR WQ  TIQ+DFNLP
Sbjct: 473 LREVAEA----------SGLELVPDPGGAAFYGPKISVQAKDAIGRTWQMSTIQLDFNLP 522

Query: 504 SRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSS 563
            RF   Y      +  PVMIHRA+FGSIERF  ++ E++ G  P WL+P+Q +   +   
Sbjct: 523 ERFELEYTAPDGTRQRPVMIHRALFGSIERFFAVLTEHYAGAFPAWLAPVQVLAVPVAEP 582

Query: 564 AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
              Y Q++ + L++  +  E D  ++    KIR  S +KIP ++I G ++A   ++  R
Sbjct: 583 FEPYLQQVVDRLRAQGVRAEVDRSDDRFGKKIRNASTQKIPFVLIAGGEDADAGAVSFR 641


>gi|307700804|ref|ZP_07637829.1| threonine--tRNA ligase [Mobiluncus mulieris FB024-16]
 gi|307613799|gb|EFN93043.1| threonine--tRNA ligase [Mobiluncus mulieris FB024-16]
          Length = 669

 Score =  477 bits (1227), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 261/671 (38%), Positives = 388/671 (57%), Gaps = 55/671 (8%)

Query: 11  DGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRS 69
           DG         TG D+         K+ +A  ING+  DL   + EG ++E IT +    
Sbjct: 8   DGKATTIAEDQTGQDIYRD-----RKEVIACFINGEPRDLYRNLHEGDALEAITIDSEMG 62

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           L ++RHS  H+MA+AV+ + P+V+  IGP IE+GFYYDF   QPF+ ++L +IEK M  I
Sbjct: 63  LNILRHSATHVMAQAVKQVRPDVKYGIGPFIENGFYYDFGVAQPFTPEDLKEIEKYMARI 122

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEI--LESIPAKEN---------------VT 172
              D  F+++ ++ ++AR+  E   + YK+E+  L+    ++N               +T
Sbjct: 123 CKEDQRFVRRAVTEDEARQ--ELADQPYKLELIGLKGGSDEDNDQAAAGASVEVGGAELT 180

Query: 173 LY----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWN 226
           +Y    + GE  W DLCRGPH+ ST  +   FKL+KV+ AYWRGD     L RIYGTAW 
Sbjct: 181 IYDNVRKNGETAWKDLCRGPHIPSTRLLSGAFKLLKVSAAYWRGDQKNDSLQRIYGTAWP 240

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR- 284
           T++EL  Y+  LEE+EKRDHR+L  E+DLF   E+ GSG+  +H KG  +   + +Y R 
Sbjct: 241 TKEELKAYVTRLEEAEKRDHRRLGTELDLFSFPEEIGSGLPVFHPKGALVRMEMENYSRQ 300

Query: 285 RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD-------DTIKDLRTFALK 337
           R +++ Y  ++TP V    L++ SGH   Y+  MF     D       +  K+   + LK
Sbjct: 301 RHLEEGYSFVSTPHVTKGQLFETSGHLSWYKEGMFPAMHLDEERDAQGNVTKEGADYYLK 360

Query: 338 PMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK 397
           PMNCP H  +F    +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDD+H++CT+
Sbjct: 361 PMNCPMHNLIFKSRTRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDSHIYCTR 420

Query: 398 EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR-PEKRVGSDALWDDAENIMKGVLDTIK 456
           +QM +E  K+   ++ + KD+G +   ++LST+ P+K VGSD +W++A   ++ V +   
Sbjct: 421 DQMKDELTKLLTFVLDLLKDYGLDDFYLELSTKNPQKFVGSDEVWEEATRTLQEVAEA-- 478

Query: 457 NSSQDRINTGVLL---GEGA-FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
                   +G+ L    EGA FYGPK     +DAIGR WQ  TIQ+DFNLP RF   Y  
Sbjct: 479 --------SGLELRPDPEGAAFYGPKISVQARDAIGRTWQMSTIQLDFNLPERFELEYTA 530

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIA 572
           +   +  PVMIHRA+FGSIERF G++ E++ G  P WL+P+Q  +  +  +   Y +++A
Sbjct: 531 ADGSRQRPVMIHRALFGSIERFFGVLTEHYAGAFPAWLAPVQVRLVPVADTFNAYCEDVA 590

Query: 573 NLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
             L++ ++ +E D  ++    KIR  +  KIP  +I G ++A   ++  R  G      V
Sbjct: 591 KQLRAENVRVEIDESDDRFGKKIRNAAKDKIPFTLIVGGEDAEHGAVSFRYRGGEQKNGV 650

Query: 633 SLLDAIPILTK 643
            +  AI  +T+
Sbjct: 651 KISAAIQEITE 661


>gi|110668486|ref|YP_658297.1| threonyl-tRNA synthetase [Haloquadratum walsbyi DSM 16790]
 gi|121687233|sp|Q18H54|SYT_HALWD RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|109626233|emb|CAJ52691.1| threonine--tRNA ligase [Haloquadratum walsbyi DSM 16790]
          Length = 642

 Score =  477 bits (1227), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 252/636 (39%), Positives = 371/636 (58%), Gaps = 23/636 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
           +DI +T PDGS  + P  AT  DVA  I   L +  +A  ++G++ D +  V  +  + I
Sbjct: 2   NDITVTLPDGSELSVPADATVEDVAYEIGPGLGRDTIAGVVDGELVDATTSVYNDARVVI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +T +      V+RHS AH+ A+A+Q  +P+ ++ IGP  +DGFYYD         ++L  
Sbjct: 62  VTEQSDEYQRVLRHSAAHVFAQALQREYPDAKLTIGPPTDDGFYYDI-ASVDLDENDLET 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWF 180
           IE +M+ II  D P  +QY S E+A   +E+    YK +ILE+  A E+ V+ Y Q ++ 
Sbjct: 121 IETEMEAIIDADIPITQQYQSREEAFSKYENN--PYKCDILETEAADEDPVSFYIQDDFE 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLC+GPHV STG++     L+ ++ AYWRGD +   L+R+YG A+ ++ EL  +L   ++
Sbjct: 179 DLCQGPHVDSTGEIGAI-TLLNISSAYWRGDEDNDTLTRVYGAAFESESELESFLERRKK 237

Query: 241 SEKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           +++RDHRK+ +E+DLF I +  G G+  +H  G KI   L S+ R   ++  YE + TP 
Sbjct: 238 AKERDHRKIGQELDLFSIPDITGPGLPLYHPDGKKILNELSSFARSLNLEAGYEPVETPH 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW+QSGH+++Y  +MF +  +D+       + LKPMNCPGH  +F+    SYR+L
Sbjct: 298 LFRTELWKQSGHYENYVDDMFLLDVSDEE------YGLKPMNCPGHATIFDQHSWSYRDL 351

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           PVR  E G VYR E  G L GL RV  FT DD H+FC  EQ+  E   + + I S+   F
Sbjct: 352 PVRYFEDGKVYRKEQRGELSGLSRVWSFTIDDGHLFCQPEQIEQEVTHVMDAIYSVLDTF 411

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           G E   V L+TRPEK VG D +W++AE  ++ VL++        I+  +  G+GAFYGPK
Sbjct: 412 GLEA-HVALATRPEKSVGGDEIWENAETQLRSVLES------QNIDYDLEPGDGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++  +DA+GR W   T+Q+DFN+P RF   Y    +    PVMIHRA++GS ERF  ++
Sbjct: 465 IDFAFEDALGRQWDGPTVQLDFNMPDRFELTYTGEDNTDHQPVMIHRALYGSYERFFMVL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+F G  PLWL+P Q  +  I+   + YA  I N L    +SIE   R  T+  KIR  
Sbjct: 525 IEHFNGKFPLWLAPDQVRILPISDDQLGYAHRIKNELSDFRVSIED--RAWTLGRKIRAA 582

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
             +++P +II GD E S  +I +R       Q V L
Sbjct: 583 QEERVPYMIIIGDDEVSTETISVRDRKEREKQDVDL 618


>gi|227875460|ref|ZP_03993601.1| threonyl-tRNA synthetase [Mobiluncus mulieris ATCC 35243]
 gi|227844014|gb|EEJ54182.1| threonyl-tRNA synthetase [Mobiluncus mulieris ATCC 35243]
          Length = 692

 Score =  477 bits (1227), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 261/671 (38%), Positives = 388/671 (57%), Gaps = 55/671 (8%)

Query: 11  DGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRS 69
           DG         TG D+         K+ +A  ING+  DL   + EG ++E IT +    
Sbjct: 31  DGKATTIAEDQTGQDIYRD-----RKEVIACFINGEPRDLYRNLHEGDALEAITIDSEMG 85

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           L ++RHS  H+MA+AV+ + P+V+  IGP IE+GFYYDF   QPF+ ++L +IEK M  I
Sbjct: 86  LNILRHSATHVMAQAVKQVRPDVKYGIGPFIENGFYYDFGVAQPFTPEDLKEIEKYMARI 145

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEI--LESIPAKEN---------------VT 172
              D  F+++ ++ ++AR+  E   + YK+E+  L+    ++N               +T
Sbjct: 146 CKEDQRFVRRAVTEDEARQ--ELADQPYKLELIGLKGGSDEDNDQAAAGASVEVGGAELT 203

Query: 173 LY----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWN 226
           +Y    + GE  W DLCRGPH+ ST  +   FKL+KV+ AYWRGD     L RIYGTAW 
Sbjct: 204 IYDNVRKNGETAWKDLCRGPHIPSTRLLSGAFKLLKVSAAYWRGDQKNDSLQRIYGTAWP 263

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR- 284
           T++EL  Y+  LEE+EKRDHR+L  E+DLF   E+ GSG+  +H KG  +   + +Y R 
Sbjct: 264 TKEELKAYVTRLEEAEKRDHRRLGTELDLFSFPEEIGSGLPVFHPKGALVRMEMENYSRQ 323

Query: 285 RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADD-------TIKDLRTFALK 337
           R +++ Y  ++TP V    L++ SGH   Y+  MF     D+         K+   + LK
Sbjct: 324 RHLEEGYSFVSTPHVTKGQLFETSGHLSWYKEGMFPAMHLDEERDAQGNVTKEGADYYLK 383

Query: 338 PMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK 397
           PMNCP H  +F    +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDD+H++CT+
Sbjct: 384 PMNCPMHNLIFKSRTRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDSHIYCTR 443

Query: 398 EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR-PEKRVGSDALWDDAENIMKGVLDTIK 456
           +QM +E  K+   ++ + KD+G +   ++LST+ P+K VGSD +W++A   ++ V +   
Sbjct: 444 DQMKDELTKLLTFVLDLLKDYGLDDFYLELSTKNPQKFVGSDEVWEEATRTLQEVAEA-- 501

Query: 457 NSSQDRINTGVLL---GEGA-FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
                   +G+ L    EGA FYGPK     +DAIGR WQ  TIQ+DFNLP RF   Y  
Sbjct: 502 --------SGLELRPDPEGAAFYGPKISVQARDAIGRTWQMSTIQLDFNLPERFELEYTA 553

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIA 572
           +   +  PVMIHRA+FGSIERF G++ E++ G  P WL+P+Q  +  +  +   Y +++A
Sbjct: 554 ADGSRQRPVMIHRALFGSIERFFGVLTEHYAGAFPAWLAPVQVRLVPVADTFNAYCEDVA 613

Query: 573 NLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
             L++ ++ +E D  ++    KIR  +  KIP  +I G ++A   ++  R  G      V
Sbjct: 614 KQLRAENVRVEIDESDDRFGKKIRNAAKDKIPFTLIVGGEDAEHGAVSFRYRGGEQKNGV 673

Query: 633 SLLDAIPILTK 643
            +  AI  +T+
Sbjct: 674 KISAAIQEITE 684


>gi|256832610|ref|YP_003161337.1| threonyl-tRNA synthetase [Jonesia denitrificans DSM 20603]
 gi|256686141|gb|ACV09034.1| threonyl-tRNA synthetase [Jonesia denitrificans DSM 20603]
          Length = 673

 Score =  476 bits (1226), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 260/651 (39%), Positives = 380/651 (58%), Gaps = 52/651 (7%)

Query: 11  DGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI-EIITPEDPRS 69
           DG         TG+D+      S  K  V + +NG++ DL   V  G + + +   +P  
Sbjct: 16  DGETTQVTDGTTGTDLF-----SANKNIVVLRVNGELKDLFYRVAAGDVVDGVDINEPDG 70

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           L V+RHS AH++A+AVQ + P+ ++ IGP I DGFYYDFD E PF+ ++L ++EK+M  I
Sbjct: 71  LNVLRHSAAHVLAQAVQKVNPDAKLGIGPPIVDGFYYDFDVETPFAPEDLKKLEKEMMRI 130

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEIL----ESIPAKEN---------VTLY-- 174
           +     F ++ ++ E+     E   E YK+E++    +S  A E          +T+Y  
Sbjct: 131 VKEGQTFQRRVITEEQGHT--ELAGEPYKIELISLKSQSDTAAEGASVEVGAGELTIYDN 188

Query: 175 --RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQE 230
             R GE  W DLCRGPH+ ST  +   FKLM+ A AYWRG    P L RIYGTAW T+ +
Sbjct: 189 VRRNGEVAWGDLCRGPHLPSTKLIGNGFKLMRSAAAYWRGSEKNPQLQRIYGTAWPTKDQ 248

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IK 288
           LT++L  L E+E+RDHR+L  EMDLF   ++ GSG+  +H +G  +   +  Y RR+ I+
Sbjct: 249 LTEHLTRLAEAERRDHRRLGVEMDLFSFPDEMGSGLAVFHPRGGVVRLEMEEYSRRRHIE 308

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV------KCADDTI-KDLRTFALKPMNC 341
             Y  +N+P +    L++ SGH D YR  M+        + AD T+ K  + + LKPMNC
Sbjct: 309 AGYSFVNSPHITKGRLYEVSGHLDWYREGMYPAMHMDEERDADGTLRKQGQDYYLKPMNC 368

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
           P H  +F+   +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDDAH++CTKEQM 
Sbjct: 369 PMHNLIFDARGRSYRELPLRLFEFGTVYRYEKSGVIHGLTRARGFTQDDAHIYCTKEQMK 428

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTR-PEKRVGSDALWDDAENIMKGVLDTIKNSSQ 460
           +E       ++ + KD+G +   ++LSTR PEK VG+D +WD+A         T++  +Q
Sbjct: 429 DELTNALTFVLDLLKDYGLDDFYLELSTRDPEKSVGTDEIWDEATR-------TLEEVAQ 481

Query: 461 DRINTGVLL----GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE 516
           D   +G+ L    G  AFYGPK     KDAIGR WQ  TIQ+DFNLP +F+  Y  +   
Sbjct: 482 D---SGLELVPDPGGAAFYGPKISVQAKDAIGRTWQMSTIQLDFNLPEKFDLEYQAADGT 538

Query: 517 KCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLK 576
           +  PVMIHRA+FGSIERF  +++E++ G  P+WL+P+Q +   +  +  +Y  +    L+
Sbjct: 539 RQRPVMIHRALFGSIERFFAVLLEHYAGQFPVWLAPVQVLAVPVADAFNDYLGDFVAELR 598

Query: 577 SHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR-RFGS 626
           +  +  E D  ++    K+R  S  K+P  +I G ++    ++  R R GS
Sbjct: 599 TRGVRAELDDSSDRFPKKVRNASTSKVPFTVIAGGEDEQAGAVSFRYRDGS 649


>gi|86608959|ref|YP_477721.1| threonyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86557501|gb|ABD02458.1| threonyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 603

 Score =  476 bits (1226), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 241/593 (40%), Positives = 367/593 (61%), Gaps = 22/593 (3%)

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T E P+ L  IRH+ +H++A AVQ ++P+ QV IGP  + GFYYDFD  +PF+ ++L +I
Sbjct: 20  THESPK-LERIRHTTSHVLAMAVQKLFPKAQVTIGPTTDYGFYYDFDHPEPFTPEDLDRI 78

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG-EWFD 181
           +K+MQ II +  P +++ +S E+AR   E+  E YK+EIL+SIP  E +++Y  G EW+D
Sbjct: 79  KKEMQAIIKKGLPVIREEVSREEARRRIEALGEPYKLEILDSIPEGEVISIYHLGNEWWD 138

Query: 182 LCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           LC GPHV +T ++  K F L+ VAGAYWRGD  +P L RIYGTAW T +EL +Y   LEE
Sbjct: 139 LCAGPHVENTQELNPKAFDLLSVAGAYWRGDETKPQLQRIYGTAWETPEELKEYKRRLEE 198

Query: 241 SEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           +++RDHRKL +E+ LF  +++ G G+  W  KG  +   L  ++++ ++K  Y  + TP 
Sbjct: 199 AKRRDHRKLGKELGLFLFSDEVGPGLPLWTPKGTTLRWVLEDFLKQEQLKRGYLPVVTPH 258

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL-RTFALKPMNCPGHVAVFNHGLKSYRE 357
           +    L++ SGHW  YR +MF +   ++  +   + F +KPMNCP H+ ++   L+SYR+
Sbjct: 259 IARVDLFKISGHWQKYREDMFPMMAENEQARAAEQGFVMKPMNCPFHIQIYKSELRSYRD 318

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R AEFG+VYR E SG L GL RVRGFT DDAH+F   +Q+  E LK+ +LI+ ++  
Sbjct: 319 LPLRYAEFGTVYRYEQSGELGGLTRVRGFTVDDAHLFVRPDQLEEEFLKVVDLILVVFDK 378

Query: 418 FGFEKIMVKLSTR---PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
              +    +LS R    +K +GS   WD AEN ++  ++ +     + I      GE AF
Sbjct: 379 LKLKDFRARLSFRDPKSDKYLGSPEDWDRAENAIRRAVEKLSMPHFEGI------GEAAF 432

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK ++I +DA+ R+WQ GT+QVD+  P RF+  YV     +  PVMIHRA FGS+ER 
Sbjct: 433 YGPKLDFIFRDALDREWQLGTVQVDYQNPQRFDLQYVAEDGSRQRPVMIHRAPFGSLERL 492

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
           IGI+IE + G+ P WL+P Q  +  ++   + YA ++ + L+   + +  D  ++ +  K
Sbjct: 493 IGILIEEYAGDFPFWLAPEQVRILPVSDQYLGYATQVRDQLREQGIRVHIDADSDRLPKK 552

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRR-----FGSTTTQKVSLLDAIPILT 642
           IR     +IP ++I G++E +  ++ +R+      GS T      LD +  L 
Sbjct: 553 IRNAEKARIPFMLIVGEQEQAAGTVSVRQRHGQELGSLTV--ADFLDQVQALN 603


>gi|184201017|ref|YP_001855224.1| threonyl-tRNA synthetase [Kocuria rhizophila DC2201]
 gi|183581247|dbj|BAG29718.1| threonyl-tRNA synthetase [Kocuria rhizophila DC2201]
          Length = 718

 Score =  476 bits (1226), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 256/649 (39%), Positives = 370/649 (57%), Gaps = 53/649 (8%)

Query: 36  KKAVAVAINGKVCDLSDPVREGSI-EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           +  V   +NG + DLS P+ +G + E +   +P  L V+RHS AH+MA+AVQ + P+ ++
Sbjct: 32  RDVVVAHVNGVLKDLSTPLADGDVVERVLVSEPEGLEVLRHSTAHVMAQAVQQLRPDAKL 91

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            IGP I DGFY+DFD  +PF+ ++L  +EK M +I+ R+  F ++ ++ ++AR   E   
Sbjct: 92  GIGPYITDGFYFDFDVAEPFTPEDLKALEKSMLKIVNRNQIFRRRTVTEDEARA--EMAD 149

Query: 155 EAYKVEI--LESIPAKENV----------------TLY-----RQGE--WFDLCRGPHVR 189
           E YK+E+  L   P    V                T+Y     + G+  W DLCRGPH+ 
Sbjct: 150 EPYKLELIDLAGGPGSGAVDESAEGASVEVGGGELTVYDNVDRKSGDVVWRDLCRGPHLP 209

Query: 190 STGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKL 249
            T  +   + LM+ A AYWRGD     L RIYGTAW ++ EL  Y   L E+E+RDHRKL
Sbjct: 210 DTKHIGNGYALMRSAAAYWRGDQRNEQLQRIYGTAWPSKDELKAYKERLAEAERRDHRKL 269

Query: 250 AREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQ 307
             E+DLF   ++ GSG+  +H KG  I + +  Y R R  +  YE + TP +   HL++ 
Sbjct: 270 GVELDLFSFPDELGSGLPVFHPKGGIIRKEMEDYSRERHARAGYEFVYTPHITKGHLYEV 329

Query: 308 SGHWDSYRANMFAVKCADDT--------IKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           SGH D YR  MF     D+          K  + + LKPMNCP H  ++    +SYRELP
Sbjct: 330 SGHLDWYRDGMFPPMHVDEERDPDTGELTKPGQDYYLKPMNCPMHNLIYRSRGRSYRELP 389

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +RL EFG+VYR E SG +HGL RVRG TQDDAH++CT+EQM  E     N ++S+ KD+G
Sbjct: 390 LRLFEFGAVYRYEKSGVIHGLTRVRGMTQDDAHIYCTREQMKGELTNTLNFVLSLLKDYG 449

Query: 420 FEKIMVKLSTR-PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL----GEGAF 474
            E   ++LST+ P K VGSD +WD+A   ++ V +          ++G+ L       AF
Sbjct: 450 MEDFYLELSTKDPNKFVGSDEIWDEATRTLREVAE----------DSGLELVPDPAGAAF 499

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK     +DAIGR WQ  TIQ+DFNLP RF+  Y  S   +  PVMIHRA+FGS+ERF
Sbjct: 500 YGPKISVQARDAIGRTWQMSTIQLDFNLPERFDLEYQASDGSRRRPVMIHRALFGSVERF 559

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
           +G++ E++ G  P WLSP+Q     +  +  +Y  E A  L+   + +E D  ++    K
Sbjct: 560 MGVLTEHYAGAFPAWLSPVQVRAIPVAEAFNDYLDEFAQTLRERGIRVEVDTSSDRFPKK 619

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           IR  S  KIP ++I G ++A   ++  R    +    VS  +A+ ++ +
Sbjct: 620 IRTASKDKIPFVVIAGGEDAEAGTVSFRFRDGSQHNGVSQAEAVELIAR 668


>gi|306818771|ref|ZP_07452493.1| threonine--tRNA ligase [Mobiluncus mulieris ATCC 35239]
 gi|304648457|gb|EFM45760.1| threonine--tRNA ligase [Mobiluncus mulieris ATCC 35239]
          Length = 692

 Score =  476 bits (1225), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 260/671 (38%), Positives = 388/671 (57%), Gaps = 55/671 (8%)

Query: 11  DGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRS 69
           DG         TG D+         K+ +A  ING+  DL   + EG ++E IT +    
Sbjct: 31  DGKATTIAEDQTGQDIYRD-----RKEVIACFINGEPRDLYRNLHEGDALEAITIDSEMG 85

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           L ++RHS  H+MA+AV+ + P+V+  IGP IE+GFYYDF   QPF+ ++L +IEK M  I
Sbjct: 86  LNILRHSATHVMAQAVKQVRPDVKYGIGPFIENGFYYDFGVAQPFTPEDLKEIEKYMARI 145

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEI--LESIPAKEN---------------VT 172
              D  F+++ ++ ++AR+  E   + YK+E+  L+    ++N               +T
Sbjct: 146 CKEDQRFVRRAVTEDEARQ--ELADQPYKLELIGLKGGSDEDNDQAAAGASVEVGGAELT 203

Query: 173 LY----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWN 226
           +Y    + GE  W DLCRGPH+ ST  +   FKL+KV+ AYWRGD     L RIYGTAW 
Sbjct: 204 IYDNVRKNGETAWKDLCRGPHIPSTRLLSGAFKLLKVSAAYWRGDQKNDSLQRIYGTAWP 263

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR- 284
           T++EL  Y+  LEE+EKRDHR+L  E+DLF   E+ GSG+  +H KG  +   + +Y R 
Sbjct: 264 TKEELKAYVTRLEEAEKRDHRRLGTELDLFSFPEEIGSGLPVFHPKGALVRMEMENYSRQ 323

Query: 285 RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADD-------TIKDLRTFALK 337
           R +++ Y  ++TP V    L++ SGH   Y+  MF     D+         K+   + LK
Sbjct: 324 RHLEEGYSFVSTPHVTKGQLFETSGHLSWYKEGMFPAMHLDEERDAQGNVTKEGADYYLK 383

Query: 338 PMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK 397
           PMNCP H  +F    +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDD+H++CT+
Sbjct: 384 PMNCPMHNLIFKSRTRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDSHIYCTR 443

Query: 398 EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR-PEKRVGSDALWDDAENIMKGVLDTIK 456
           +QM +E  K+   ++ + KD+G +   ++LST+ P+K VGSD +W++A   ++ V +   
Sbjct: 444 DQMKDELTKLLTFVLDLLKDYGLDDFYLELSTKNPQKFVGSDEVWEEATRTLQEVAEA-- 501

Query: 457 NSSQDRINTGVLL---GEGA-FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
                   +G+ L    EGA FYGPK     +DAIGR WQ  TIQ+DFNLP RF   Y  
Sbjct: 502 --------SGLELRPDPEGAAFYGPKISVQARDAIGRTWQMSTIQLDFNLPERFELEYTA 553

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIA 572
           +   +  PVMIHRA+FGSIERF G++ E++ G  P WL+P+Q  +  +  +   Y +++A
Sbjct: 554 ADGSRQRPVMIHRALFGSIERFFGVLTEHYAGAFPAWLAPVQVRLVPVADTFNAYCEDVA 613

Query: 573 NLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
             L++ ++ +E D  ++    KIR  +  K+P  +I G ++A   ++  R  G      V
Sbjct: 614 KQLRAENVRVEIDESDDRFGKKIRNAAKDKVPFTLIVGGEDAEHGAVSFRYRGGEQKNGV 673

Query: 633 SLLDAIPILTK 643
            +  AI  +T+
Sbjct: 674 KISAAIQEITE 684


>gi|119953497|ref|YP_945706.1| threonyl-tRNA synthetase [Borrelia turicatae 91E135]
 gi|254783510|sp|A1R0E4|SYT_BORT9 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|119862268|gb|AAX18036.1| threonyl-tRNA synthetase [Borrelia turicatae 91E135]
          Length = 583

 Score =  476 bits (1225), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 240/569 (42%), Positives = 356/569 (62%), Gaps = 17/569 (2%)

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           RHS AH+MAEAV  ++P  ++AIGP I+DGFYYDFD E+    D+L  IE+KM+EI+   
Sbjct: 15  RHSIAHVMAEAVIELFPNTKIAIGPPIKDGFYYDFDFEKHIIEDDLLLIEQKMREILKTG 74

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQ 193
           S F+K+ ++ E+A  LF  K E YK++++  +   + +++Y+   + DLC+GPH+ + G+
Sbjct: 75  SSFVKEVITKEQALMLF--KDEPYKIDLIHELDIADEISIYKSHNFTDLCKGPHIDNMGK 132

Query: 194 VK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLARE 252
           +  K FKL+ +AGAYWRGD    ML+RIYGT WN +++L  YL   EE ++RDHRKL RE
Sbjct: 133 IDPKAFKLISIAGAYWRGDEKNKMLTRIYGTLWNNEKDLKAYLKLREEIKRRDHRKLGRE 192

Query: 253 MDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGH 310
           +DLF + E+ G G+IF+H  G +I   +  + R +  K+ Y+ + TP V    LW+ SGH
Sbjct: 193 LDLFSVHEEIGPGLIFFHPSGARIRALIEDFWREEHFKNGYDILFTPHVGKSWLWETSGH 252

Query: 311 WDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYR 370
            D Y+ +MF     D +      + +KPMNCP H+A++N G  SYR+LP R AE G+VYR
Sbjct: 253 LDFYKESMFEKMEMDKS-----NYYVKPMNCPFHIAIYNTGRHSYRDLPFRWAELGTVYR 307

Query: 371 NEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR 430
            E  G+LHG MRVRGFTQDDAH+ CT +Q+  E  ++    + ++  FGF  +   LST+
Sbjct: 308 YEKVGALHGTMRVRGFTQDDAHIICTYDQVKFEVQEVLRFALYMWNKFGFTALKAYLSTK 367

Query: 431 PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRD 490
           PEK VG +  W  +  ++K  L  +       I+  +  G GAFYGPK +  + D++GR+
Sbjct: 368 PEKSVGDEDDWIMSVKVLKEALINLG------IDYDIDEGGGAFYGPKIDLKIIDSLGRE 421

Query: 491 WQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL 550
           WQ  TIQ DFNLP+RF   Y     ++  P MIHRA+ GSIERF GI++E++ G  P+WL
Sbjct: 422 WQMSTIQFDFNLPARFKMTYTAEDGKERQPFMIHRALLGSIERFFGILVEHYGGAFPVWL 481

Query: 551 SPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIIC 609
           +P+Q ++  + +   EYA E+ +  K   + I+ D   N  +N KIR++  +K+P + I 
Sbjct: 482 APLQVVIIPVNNIVEEYALEVLSRFKKEGIRIKLDNDCNMRMNAKIRQYQSQKVPYMFIV 541

Query: 610 GDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           G+KE  E  I IR   +     + L +A+
Sbjct: 542 GEKEVVEGKISIRTRTNEQINGLELKEAL 570


>gi|269977288|ref|ZP_06184261.1| threonyl-tRNA synthetase [Mobiluncus mulieris 28-1]
 gi|269934591|gb|EEZ91152.1| threonyl-tRNA synthetase [Mobiluncus mulieris 28-1]
          Length = 669

 Score =  476 bits (1225), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 260/671 (38%), Positives = 388/671 (57%), Gaps = 55/671 (8%)

Query: 11  DGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRS 69
           DG         TG D+         K+ +A  ING+  DL   + EG ++E IT +    
Sbjct: 8   DGKATTIAEDQTGQDIYRD-----RKEVIACFINGEPRDLYRNLHEGDALEAITIDSEMG 62

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           L ++RHS  H+MA+AV+ + P+V+  IGP IE+GFYYDF   QPF+ ++L +IEK M  I
Sbjct: 63  LNILRHSATHVMAQAVKQVRPDVKYGIGPFIENGFYYDFGVAQPFTPEDLKEIEKYMARI 122

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEI--LESIPAKEN---------------VT 172
              D  F+++ ++ ++AR+  E   + YK+E+  L+    ++N               +T
Sbjct: 123 CKEDQRFVRRAVTEDEARQ--ELADQPYKLELIGLKGGSDEDNDQAAAGASVEVGGAELT 180

Query: 173 LY----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWN 226
           +Y    + GE  W DLCRGPH+ ST  +   FKL+KV+ AYWRGD     L RIYGTAW 
Sbjct: 181 IYDNVRKNGETAWKDLCRGPHIPSTRLLSGAFKLLKVSAAYWRGDQKNDSLQRIYGTAWP 240

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR- 284
           T++EL  Y+  LEE+EKRDHR+L  E+DLF   E+ GSG+  +H KG  +   + +Y R 
Sbjct: 241 TKEELKAYVTRLEEAEKRDHRRLGTELDLFSFPEEIGSGLPVFHPKGALVRMEMENYSRQ 300

Query: 285 RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD-------DTIKDLRTFALK 337
           R +++ Y  ++TP V    L++ SGH   Y+  MF     D       +  K+   + LK
Sbjct: 301 RHLEEGYSFVSTPHVTKGQLFETSGHLSWYKEGMFPAMHLDEERDAQGNVTKEGADYYLK 360

Query: 338 PMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK 397
           PMNCP H  +F    +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDD+H++CT+
Sbjct: 361 PMNCPMHNLIFKSRTRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDSHIYCTR 420

Query: 398 EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR-PEKRVGSDALWDDAENIMKGVLDTIK 456
           +QM +E  K+   ++ + KD+G +   ++LST+ P+K VGSD +W++A   ++ V +   
Sbjct: 421 DQMKDELTKLLTFVLDLLKDYGLDDFYLELSTKNPQKFVGSDEVWEEATRTLQEVAEA-- 478

Query: 457 NSSQDRINTGVLL---GEGA-FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
                   +G+ L    EGA FYGPK     +DAIGR WQ  TIQ+DFNLP RF   Y  
Sbjct: 479 --------SGLELRPDPEGAAFYGPKISVQARDAIGRTWQMSTIQLDFNLPERFELEYTA 530

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIA 572
           +   +  PVMIHRA+FGSIERF G++ E++ G  P WL+P+Q  +  +  +   Y +++A
Sbjct: 531 ADGSRQRPVMIHRALFGSIERFFGVLTEHYAGAFPAWLAPVQVRLVPVADTFNAYCEDVA 590

Query: 573 NLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
             L++ ++ +E D  ++    KIR  +  K+P  +I G ++A   ++  R  G      V
Sbjct: 591 KQLRAENVRVEIDESDDRFGKKIRNAAKDKVPFTLIVGGEDAEHGAVSFRYRGGEQKNGV 650

Query: 633 SLLDAIPILTK 643
            +  AI  +T+
Sbjct: 651 KISAAIQEITE 661


>gi|302335586|ref|YP_003800793.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Olsenella uli
           DSM 7084]
 gi|301319426|gb|ADK67913.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Olsenella uli
           DSM 7084]
          Length = 588

 Score =  476 bits (1225), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 252/586 (43%), Positives = 360/586 (61%), Gaps = 22/586 (3%)

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD--KEQPFSSDELAQ 121
           PE+   L VIRHS AHIMA+A++ ++PE   A GP  ++GFYYD D  +    S D+L  
Sbjct: 14  PEN-EELHVIRHSAAHIMAQAIKRLYPEADFAFGPATDNGFYYDIDLPEGTKISDDDLPA 72

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE +M++I   +  F    L  E A    E + E YKVE +  +P    +T YRQGE+ D
Sbjct: 73  IEAEMRKITKENLRFETYELPREDAIRHMEERGEKYKVEHIGDLPDDARITFYRQGEYVD 132

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           +C GPH+  T  +K F KL  V+GAYWRGDS   ML+R+ G A+ +++EL ++   L E+
Sbjct: 133 MCVGPHLTYTKALKAF-KLTGVSGAYWRGDSANKMLTRVNGVAFRSREELLEHERLLAEA 191

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEINTPQV 299
           EKRDHRK+ +EM LF ++E G G  FW   G ++   L+ Y + +++D   YE++ TP +
Sbjct: 192 EKRDHRKIGKEMGLFMMSEAGPGFPFWLPNGMRVRNALMDYWQ-EMQDRFGYEQVQTPII 250

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           L + LW+ SGHWD Y+ NM+  +  D+       FA+KPMNCPG   V+    +SYR+LP
Sbjct: 251 LSRTLWETSGHWDHYKDNMYTTQIDDED------FAIKPMNCPGACLVYKSKPRSYRDLP 304

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           ++LAE G  +R+E  G+LHGL RVR FTQDDAH+F   +Q+  +     +LI + Y  FG
Sbjct: 305 LKLAEAGLDHRHELKGALHGLFRVREFTQDDAHLFIRPDQITEQVTDTAHLITTYYAQFG 364

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F    V+LSTRPE  +GSD  W+ AE  ++  LD++       ++  V  G+GAFYGPK 
Sbjct: 365 F-PYHVELSTRPEDSMGSDEDWERAEQGLRDALDSMG------VDYIVNEGDGAFYGPKI 417

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           ++ L+D +GR WQCGTIQ+DF LP  F   Y      K  P+MIHRA FGS ERFIG++I
Sbjct: 418 DFHLQDCLGRTWQCGTIQLDFQLPHNFQLEYTAPDGSKQQPIMIHRAGFGSFERFIGMLI 477

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE-H 598
           E ++G  P WLSP Q  V  ++    +YA E+A  L++  + ++ D R+E I YKIRE  
Sbjct: 478 EQYEGKFPTWLSPCQVKVLPVSEKTRDYALEVARTLRAAGVRVKVDVRDEKIGYKIREAR 537

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           S  ++P ++I G+KEA   +I +R   S  T + +L D +  +T E
Sbjct: 538 SADRVPYMLILGEKEAEANNISVRD-RSNETHQATLEDFVTEITAE 582


>gi|257064333|ref|YP_003144005.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Slackia
           heliotrinireducens DSM 20476]
 gi|256791986|gb|ACV22656.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Slackia
           heliotrinireducens DSM 20476]
          Length = 586

 Score =  476 bits (1224), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 238/563 (42%), Positives = 350/563 (62%), Gaps = 17/563 (3%)

Query: 72  VIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQIEKKMQEII 130
           V+RHS AHIMA+A++ ++P+     GP  E+GFYYD D  ++  S D+L  IE +M++I 
Sbjct: 21  VLRHSAAHIMAQAIKRLYPQADFGYGPATENGFYYDVDLGDEKISEDDLPAIEAEMKKIC 80

Query: 131 ARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRS 190
             +  F    L  E+A +  E ++E YKVE +  +     +T Y+QGE+ D+C GPH+  
Sbjct: 81  KENLKFSTYELPREEAIKHMEERQEQYKVEHIGDLDPDARITFYKQGEYVDMCVGPHILY 140

Query: 191 TGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLA 250
           T  +K F KL  V+GAYW+GD +  ML+RI G A+ +++EL +Y    EE++KRDHRK+ 
Sbjct: 141 TKALKAF-KLTAVSGAYWKGDKDNKMLTRINGIAFASKEELAEYERIQEEAKKRDHRKIG 199

Query: 251 REMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSG 309
           +EM+LF  A++G G  FW   G K+   LI Y    + K +Y+E+ TPQ+L + LW+ SG
Sbjct: 200 QEMELFMFADEGPGFPFWLPNGTKLKNALIEYWHDMMAKYNYDEVETPQILSRKLWETSG 259

Query: 310 HWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVY 369
           HWD Y+ NM+       T+ D   +A+KPMNCPG   ++    +SYR+LP++LAE G  +
Sbjct: 260 HWDHYKENMYT------TVIDEEDYAVKPMNCPGACLIYKSRPRSYRDLPLKLAEAGLDH 313

Query: 370 RNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
           R+E  G+LHGL RVR FTQDD H++ T EQ+ +  L+   L    Y+ FGFE   V+LST
Sbjct: 314 RHELKGALHGLFRVRAFTQDDGHIYVTPEQISDIVLETARLFDEYYQQFGFE-YKVELST 372

Query: 430 RPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGR 489
           RPE  +GSD  W+ AEN   G+ + ++   +D I   +  G+GAFYGPK ++ LKD +GR
Sbjct: 373 RPEDSMGSDEDWERAEN---GLREALEKMGKDYI---LNEGDGAFYGPKIDFHLKDCLGR 426

Query: 490 DWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW 549
            WQCGTIQ+DF LP  F   Y+ +   K  P+MIHRA FGS ERFIG++ E + G  P W
Sbjct: 427 TWQCGTIQLDFQLPQNFELEYMAADGTKKRPIMIHRAGFGSFERFIGMLTEQYAGKFPTW 486

Query: 550 LSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE-HSIKKIPIIII 608
           L+P+Q  +  ++    +YA E+  +L+   +    D R+E I YKIRE  S  ++P ++I
Sbjct: 487 LAPLQVKILPVSEKTRDYALEVGQVLRDAGVRAVVDTRDEKIGYKIREARSTDRVPYMLI 546

Query: 609 CGDKEASERSIGIRRFGSTTTQK 631
            G++E   + I +R   + T  +
Sbjct: 547 LGEQERDGKYISVRDRSNETVAR 569


>gi|166154796|ref|YP_001654914.1| threonyl-tRNA synthetase [Chlamydia trachomatis 434/Bu]
 gi|166155671|ref|YP_001653926.1| threonyl-tRNA synthetase [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
 gi|301336072|ref|ZP_07224316.1| threonyl-tRNA synthetase [Chlamydia trachomatis L2tet1]
 gi|238687393|sp|B0B8F5|SYT_CHLT2 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|238687442|sp|B0BA34|SYT_CHLTB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|165930784|emb|CAP04281.1| threonyl-tRNA synthetase [Chlamydia trachomatis 434/Bu]
 gi|165931659|emb|CAP07235.1| threonyl-tRNA synthetase [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
          Length = 635

 Score =  476 bits (1224), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 251/609 (41%), Positives = 369/609 (60%), Gaps = 21/609 (3%)

Query: 17  FPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIRH 75
            P  A+  D+A  + +S     V   IN +  DLS  +++G ++  +T +DP+   +  H
Sbjct: 13  LPEGASAMDLANKMKQSHC--FVGALINDQEKDLSTTLQDGDTVLFLTWDDPKGREIFLH 70

Query: 76  SCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSP 135
           + AHI+A+AV  +WP  Q  IGP+I+ GFYYDF      S ++   IE   + I     P
Sbjct: 71  TSAHILAQAVLRLWPSAQPTIGPVIDQGFYYDF-ANLSISEEDFPAIEAMAKTIAEEKFP 129

Query: 136 FLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVK 195
             +Q    ++A   + S+   +K E++  +P +  ++ Y QGE+ DLCRGPH+ ST  VK
Sbjct: 130 ISRQVFPDKEAALAYFSQN-PFKAELIAELPEEVEISAYTQGEFLDLCRGPHLPSTAPVK 188

Query: 196 KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDL 255
            F KL++ + AYW+GD +R  L RIYG ++ T +EL ++L+ LEE++KRDHR L  ++DL
Sbjct: 189 AF-KLLRTSSAYWKGDPSRESLIRIYGVSFPTTKELKEHLHQLEEAKKRDHRVLGTKLDL 247

Query: 256 FHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSY 314
           F      +G+ F+H +G  ++  L+ Y +R   +  Y++I TPQ++++ LW+ SGHW++Y
Sbjct: 248 FSQQTCSAGMPFFHPRGMVVWNALVDYWKRLHQRAGYQQIQTPQLMNRELWEISGHWENY 307

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
           + NM+ +        D   +A+KPMNCPG +  +   L SYRE P+R+AE G V+R+E S
Sbjct: 308 KENMYTLTV------DEEDYAIKPMNCPGCMLYYKTQLHSYREFPLRIAEIGHVHRHELS 361

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK- 433
           G+L GLMRVR F QDDAHVF T EQ+  E L I NL+  +Y  FG E   ++LSTRPE+ 
Sbjct: 362 GALSGLMRVRTFHQDDAHVFLTPEQVEEETLNILNLVSELYGTFGLE-YHLELSTRPEQG 420

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
            +GSD LW+ A   +K  L  +K+     I+ G    EGAFYGPK +  +KDAI R WQC
Sbjct: 421 TIGSDDLWELATEALKRAL--VKSQKPFIISPG----EGAFYGPKIDIHVKDAINRTWQC 474

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI 553
           GTIQ+D  LP RF+  Y N+  EK  P+M+HRA+FGSIERF+GI+IE+FKG  PLWLSP 
Sbjct: 475 GTIQLDMFLPERFDLKYTNAQGEKSTPIMLHRALFGSIERFLGILIEHFKGRFPLWLSPE 534

Query: 554 QAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
              + T+       AQE+A       + +  D  NE+++ KIR     ++  +I  GDKE
Sbjct: 535 HVRIITVADRHEARAQELAKHFSQMGIIVSVDSSNESVSKKIRNAQNMQVNYMITIGDKE 594

Query: 614 ASERSIGIR 622
                + +R
Sbjct: 595 LETHLLAVR 603


>gi|296170866|ref|ZP_06852424.1| threonine--tRNA ligase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295894491|gb|EFG74233.1| threonine--tRNA ligase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 677

 Score =  476 bits (1224), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 252/626 (40%), Positives = 367/626 (58%), Gaps = 41/626 (6%)

Query: 44  NGKVCDLS-DPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIED 102
           +GK+ DLS  P  +  +  +  +     +VIRHS AH++A+AVQ ++P+ ++ IGP I D
Sbjct: 39  DGKLRDLSWVPEADAEVVPVAADTDEGRSVIRHSAAHVLAQAVQGLFPDAKLGIGPPITD 98

Query: 103 GFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQ-YLSHEKARELFESKKEAYKVEI 161
           GFYYDFD  +PF+ ++LA +EK+M++I+     F ++ Y S ++AR   E   E YK+E+
Sbjct: 99  GFYYDFDVAEPFTPEDLAALEKRMRQIVKEGQLFERRVYESKDQARA--ELAGEPYKLEL 156

Query: 162 LESIPAKENV--------TLY-------RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGA 206
           ++      ++        T Y       R+  W DLCRGPH+ +T  +  F KL + + A
Sbjct: 157 VDDKSGDPDIMEVGGDELTAYDNLNPRSRERVWGDLCRGPHIPTTRHIPAF-KLTRSSAA 215

Query: 207 YWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGV 265
           YWRGD     L RIYGTAW +Q+ L ++L  LEE+++RDHRKL  E+DLF   ++ GSG+
Sbjct: 216 YWRGDQKNASLQRIYGTAWESQEALDRHLELLEEAQRRDHRKLGTELDLFSFPDEIGSGL 275

Query: 266 IFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCA 324
             +H KG  + + L  Y RRK I+  YE +NTP +    L+  SGH D Y   MF     
Sbjct: 276 AVFHPKGGVVRRELEEYSRRKHIEAGYEFVNTPHITKAQLFHTSGHLDWYAEGMFPPMHL 335

Query: 325 DDTIKDLRT-------FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           D  I D  T       + LKPMNCP H  +F    +SYRELP+RL EFG+VYR E SG +
Sbjct: 336 DAEIGDDGTVRKPGQDYYLKPMNCPMHTLIFRSRGRSYRELPLRLFEFGTVYRYEKSGVV 395

Query: 378 HGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR-PEKRVG 436
           HGL R RGFT DD+H+FCT+EQ+  E   +   ++ +  D+G E   ++LST+ PEK VG
Sbjct: 396 HGLTRARGFTMDDSHIFCTREQLHGELASLLRFVLELLGDYGLEDFYLELSTKDPEKFVG 455

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
           +D +W+ A N +  V      +++  +      G  AFYGPK     +DA+GR WQ  TI
Sbjct: 456 TDEMWEQATNSLAEV------AAESGLELVPDPGGAAFYGPKISVQARDALGRSWQMSTI 509

Query: 497 QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI 556
           QVDFN P RF   Y      +  PVMIHRA+FGSIERF GI+ E++ G  P WL+P+Q +
Sbjct: 510 QVDFNFPERFELEYTAPDGTRQRPVMIHRALFGSIERFFGILTEHYAGAFPAWLAPVQVV 569

Query: 557 VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASE 616
              +    V Y + +A  LKSH + +E D  ++ +  KI  H+ +K+P +++ GD++   
Sbjct: 570 GIPVADEHVPYLESVAAQLKSHGVRVEVDASDDRMAKKIVHHTGQKVPFMLLAGDRDVQA 629

Query: 617 RSIGIRRFGSTT----TQKVSLLDAI 638
           +++   RFG  T      + S +DAI
Sbjct: 630 KAVSF-RFGDRTQINGVPRDSAVDAI 654


>gi|118471368|ref|YP_887250.1| threonyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
 gi|166225464|sp|A0QWG2|SYT_MYCS2 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|118172655|gb|ABK73551.1| threonyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
          Length = 684

 Score =  475 bits (1223), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 251/611 (41%), Positives = 373/611 (61%), Gaps = 37/611 (6%)

Query: 45  GKVCDLS-DPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG 103
           G++ DLS  P  +  +  +  +     +VIRHSCAH++A+AVQ ++P+ ++ IGP I DG
Sbjct: 47  GRLRDLSWTPDTDVEVTPVAADTEEGRSVIRHSCAHVLAQAVQELFPQAKLGIGPPITDG 106

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQ-YLSHEKARELFESKKEAYKVEIL 162
           FYYDFD E+PF+ ++L ++EK+M++II     F ++ Y S + ARE  E   E YK+E++
Sbjct: 107 FYYDFDVEEPFTPEDLERLEKRMRQIIKDGQLFSRRVYESKDAARE--ELANEPYKLELV 164

Query: 163 ESIPAKENV--------TLY-------RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAY 207
           +      +V        T Y       ++  W DLCRGPH+ +T  +  F KL + + AY
Sbjct: 165 DDKSGDPDVMEVGGDELTAYDNLNARTKERVWGDLCRGPHIPTTRYIPAF-KLTRSSAAY 223

Query: 208 WRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVI 266
           WRGD N   L RIYGTAW +Q+ L ++L  +EE+++RDHRKL  E+DLF   ++ GSG+ 
Sbjct: 224 WRGDQNNASLQRIYGTAWESQEALDRHLELIEEAQRRDHRKLGVELDLFSFPDELGSGLP 283

Query: 267 FWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMF------ 319
            +H +G  + + L  Y RRK ++  YE +NTP +  + L+  SGH + Y   MF      
Sbjct: 284 VFHPRGGVVRRELEDYSRRKHLEAGYEFVNTPHITKEQLYVTSGHLEWYADGMFPAMHID 343

Query: 320 AVKCADDTI-KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLH 378
           A   AD  + K  + + LKPMNCP H  +F    +SYRELP+RL EFGSVYR E SG +H
Sbjct: 344 AEYDADGQVRKPGQNYYLKPMNCPMHHLIFRSRGRSYRELPLRLFEFGSVYRYEKSGVVH 403

Query: 379 GLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR-PEKRVGS 437
           GL RVRG TQDDAH++ T+EQM +E  ++   ++S+ KD+G +   ++LST+ PEK VGS
Sbjct: 404 GLTRVRGMTQDDAHIYTTREQMRDELTRLLEFVLSLLKDYGLDDYYLELSTKDPEKYVGS 463

Query: 438 DALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ 497
           D +W++A   ++ V +    S  D +      G  AFYGPK    +KDA+GR WQ  TIQ
Sbjct: 464 DEIWEEATETLREVAEA---SGLDLVPDP---GGAAFYGPKISVQVKDALGRSWQMSTIQ 517

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIV 557
           +DFN+P RF   Y  +   +  PV+IHRA+FGSIERF G++ E++ G  P WL+P+Q + 
Sbjct: 518 LDFNMPDRFELEYTAADGSRRRPVLIHRALFGSIERFFGVLTEHYAGAFPAWLAPVQVVG 577

Query: 558 TTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASER 617
             +  +   Y +E+A  LKS  + +E D  ++ +  KI  H+  K+P +++ GDK+A   
Sbjct: 578 IPVADAHTPYLEEVAAQLKSRGVRVEVDSSDDRMAKKIVNHTNMKVPFMLLAGDKDAEAG 637

Query: 618 SIGIRRFGSTT 628
           ++   RFG  T
Sbjct: 638 AVSF-RFGDRT 647


>gi|330443967|ref|YP_004376953.1| threonyl-tRNA synthetase [Chlamydophila pecorum E58]
 gi|328807077|gb|AEB41250.1| threonyl-tRNA synthetase [Chlamydophila pecorum E58]
          Length = 635

 Score =  475 bits (1223), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 252/628 (40%), Positives = 378/628 (60%), Gaps = 24/628 (3%)

Query: 17  FPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIRH 75
            P     +D A  +  S  +  + V I+G+  DL  P++EG ++  IT ED     +  H
Sbjct: 13  LPEGTVAADFASKMKDS--QNFIGVLIDGQPKDLLTPLQEGNTVTFITSEDSHGREIFLH 70

Query: 76  SCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSP 135
           + AH++A+AV  +WP+ Q  IGP+I+ GFYYDF      S  +   IE+ + +I+  + P
Sbjct: 71  TSAHLLAQAVLRLWPDAQPTIGPVIDQGFYYDF-ANLSISEKDFPAIEEMVAKIVEEELP 129

Query: 136 FLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVK 195
             +  L   K   L +     +K E++  +P  E ++ Y QGE+ DLCRGPH+ ST  VK
Sbjct: 130 IARSVLK-TKDEALQKFSNNPFKAELIRELPENEEISAYAQGEFMDLCRGPHLPSTAPVK 188

Query: 196 KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDL 255
            F K+++ + AYWRGD +R  L R+YG ++ T QEL ++L+ LEE++KRDHR L  ++DL
Sbjct: 189 AF-KVLRTSAAYWRGDPSRESLVRVYGISFPTMQELKEHLHQLEEAKKRDHRVLGVKLDL 247

Query: 256 FHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSY 314
           F   E  +G+ F+H +G  I+  LI++ +    +  Y++I TPQ+++Q LW+ SGHW +Y
Sbjct: 248 FSQQEYAAGMPFFHPRGMIIWDALINFWKELHARAGYQQIKTPQLMNQRLWEISGHWQNY 307

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
           + NM+ +        D   +A+KPMNCPG +  +   L SY+E P+R+AE G V+R+E S
Sbjct: 308 KENMYTLTL------DEENYAIKPMNCPGCMLYYKTHLHSYKEFPLRVAEIGHVHRHEVS 361

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK- 433
           G+L GLMRVR F QDDAHVF T EQ+  E L I +L+  +Y  FG     ++LSTRP+  
Sbjct: 362 GALSGLMRVRAFHQDDAHVFLTPEQVEEETLNILDLVAKLYHTFGL-AYHLELSTRPKTG 420

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
            +GSD LW+ A + ++  L+  K+ S   I       EGAFYGPK +  +KDAI R WQC
Sbjct: 421 TIGSDELWEHATSALQRALE--KSGSSFIITPE----EGAFYGPKIDIHVKDAINRTWQC 474

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI 553
           GTIQ+D  LP RF+  Y N+   K  PVM+HRA+FGSIERF+GI+IE+FKG  PLW+SP 
Sbjct: 475 GTIQLDMFLPERFHLEYTNAEGGKSIPVMLHRALFGSIERFLGILIEHFKGKFPLWISPE 534

Query: 554 QAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
           Q  + T+    +  A+E+A   ++  L +  D  +E+++ KIR     ++  ++  GD+E
Sbjct: 535 QVRLITVADRHIPRARELAQKWQNLGLVVTVDDASESVSKKIRNAQTMQVNYMVTLGDQE 594

Query: 614 ASERSIGIRRFGSTTTQKVS---LLDAI 638
            +  ++ IR   +     VS    L+AI
Sbjct: 595 VANNTLAIRTRDNRVINDVSEEKFLNAI 622


>gi|325336816|gb|ADZ13090.1| Threonyl-tRNA synthetase [Riemerella anatipestifer RA-GD]
          Length = 591

 Score =  475 bits (1223), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 252/598 (42%), Positives = 372/598 (62%), Gaps = 21/598 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           +K+T PDGSI+ F    T  +VA+SIS  LA+  ++  +N K  +++ P+ E  +++++T
Sbjct: 2   VKITLPDGSIREFEGVVTPLEVAKSISEGLARNTISAMVNNKQVEVTTPITEDATVQLLT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQI 122
             D        HS AH++A+A+ + +P  ++ IGP IE+GFYYD D  ++  S  +  +I
Sbjct: 62  WNDDMGKKAFWHSSAHLLAQAILAYYPNAKLTIGPAIENGFYYDVDFGDETLSEKDFEKI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E+KM E   +DS F    +S  KA  L E     YK E++E++   E +T     ++ DL
Sbjct: 122 EQKMLENAKKDSTFKLYAIS--KAEALKEYADNPYKTELIENLNDGE-ITFCSHDDFTDL 178

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRG H+ STG VK   K++  AGAYWRGD   P L+R+YG ++  Q++L +YL  LEE++
Sbjct: 179 CRGGHIPSTGIVKAV-KILNAAGAYWRGDEKNPQLTRVYGISFPKQKDLKEYLERLEEAK 237

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           +RDHRKL +E+ LF  +E  G+G+  W  KG  + + L S++   + K  YE + TP + 
Sbjct: 238 RRDHRKLGKELGLFTFSEKVGAGLPLWLPKGAALRKKLESFLSEAQRKGGYEFVMTPHIG 297

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  L++ SGH++ Y A+ F       T      F LKPMNCP H  V+     SY++LP 
Sbjct: 298 NIELYKTSGHYEKYGADSFQ---PIKTPHVGEEFLLKPMNCPHHCEVYKAQQWSYKDLPK 354

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R AEFG+VYR E SG LHGL RVRGFTQDDAH+FCT +Q+  E  K+ +L++ ++K  GF
Sbjct: 355 RYAEFGTVYRYEQSGELHGLTRVRGFTQDDAHLFCTPDQLLEEFEKVIDLVLYVFKSLGF 414

Query: 421 EKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           E  + ++S R +    K +GS+  W+ AE+    ++   KN     +NT V  GE AFYG
Sbjct: 415 EDFIAQVSLRDKENRAKYIGSEENWEKAES---AIITAAKNKG---LNTVVEYGEAAFYG 468

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK ++++KDA+GR WQ GTIQVD+NLP RF+  YV S +E+  P+MIHRA FGS+ERFI 
Sbjct: 469 PKLDFMVKDALGRSWQLGTIQVDYNLPERFDLTYVGSDNERHRPIMIHRAPFGSMERFIA 528

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
           I+IEN  G+ PLWL+P Q I+  I+    +YA++++ LL++H +    D RNE    K
Sbjct: 529 ILIENTAGDFPLWLNPDQYILLPISEKYTDYAKKVSQLLENHDICGLVDERNEKTGKK 586


>gi|312143811|ref|YP_003995257.1| threonyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
 gi|311904462|gb|ADQ14903.1| threonyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
          Length = 652

 Score =  475 bits (1223), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 251/631 (39%), Positives = 380/631 (60%), Gaps = 25/631 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCD----LSDPVREGS 58
           S++K+T PDGS K +    T  ++A SI   L + A+A  ++G+  D    ++D V    
Sbjct: 2   SEVKITLPDGSQKEYDAGVTVEEIAYSIGSGLGRDAIAGVVDGRKVDAYYEITDDV---E 58

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           + IIT +    L VIRH+ +H+MA+AV+ ++  VQVAIGP IEDGFYYDFD E+ F+ + 
Sbjct: 59  LSIITIDSEEGLEVIRHTASHVMAQAVKRLYDNVQVAIGPDIEDGFYYDFDLEESFNQES 118

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L +IE +MQ+II  D    ++ L  E+A  L E + E YK+E++  +   E ++LY QG+
Sbjct: 119 LEEIEAEMQKIIDEDIEVRRKELPREEAIALMEERNEDYKIELINGLD-DEMISLYFQGD 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + DLCRGPH+ STG VK F KL+  AGAYWRGD N  ML RIYGTA+ +Q+EL +YL   
Sbjct: 178 FVDLCRGPHLPSTGYVKAF-KLLNTAGAYWRGDENNAMLQRIYGTAFASQKELEKYLERR 236

Query: 239 EESEKRDHRKLAREMDLFH-IAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINT 296
           EE++KRDH KL RE+DLF  + E G G+     KG K+ Q L  ++   + K  Y+   T
Sbjct: 237 EEAKKRDHNKLGRELDLFMTVDEIGQGLPLLKPKGAKVVQILQRFVEDEEEKRGYQITKT 296

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +    L++ SGHW+ Y+  MF +    D  KD    AL+PM CP    ++N  L+SYR
Sbjct: 297 PFMAKSDLYEISGHWEHYKDGMFILG---DEEKDDNLMALRPMTCPFQFQIYNSKLRSYR 353

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +LP+R +E  S++RNE SG +HGL+R+R FT  + H+  T EQ+  E   + +LI  + +
Sbjct: 354 DLPIRYSETSSLFRNEASGEMHGLIRLRQFTISEGHLIVTPEQLEEEFRGVIDLINYMME 413

Query: 417 DFGFEK-IMVKLST-RPE---KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
             G E  I  + S   PE   K + +   W D++  MK +LD +    ++        GE
Sbjct: 414 SIGIEDDIWYRFSKWDPENKDKYIDNPEAWKDSQAKMKTILDNLDMEYEEAD------GE 467

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
            AFYGPK +   K+  G++    T+Q+DF LP RF+  Y++ ++EK HP++IHR   G  
Sbjct: 468 AAFYGPKLDIQFKNVHGKEDTIITVQIDFALPERFDMTYIDENNEKQHPIVIHRTSIGCY 527

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           ER + ++IE + G  P WL+P+QA +  ++   ++YA +I   L++  + +E D R E +
Sbjct: 528 ERTLAMLIEKYAGAFPTWLAPVQAKIIPVSDDQLDYAYQIKKELEADDIRVEVDARTEKV 587

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIR 622
            YKIRE  ++++P ++I G +E    S+ +R
Sbjct: 588 GYKIREAQVEQVPYMLIVGSREEENGSVSVR 618


>gi|325963430|ref|YP_004241336.1| Ser-tRNA hydrolase; threonyl-tRNA synthetase [Arthrobacter
           phenanthrenivorans Sphe3]
 gi|323469517|gb|ADX73202.1| Ser-tRNA hydrolase; threonyl-tRNA synthetase [Arthrobacter
           phenanthrenivorans Sphe3]
          Length = 669

 Score =  475 bits (1223), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 257/643 (39%), Positives = 374/643 (58%), Gaps = 47/643 (7%)

Query: 36  KKAVAVAINGKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           +  V   +NG++ DL   + EG+ +E +T + P  L V+RHS AH+MA+AVQ + P+ ++
Sbjct: 32  RDVVVARVNGELKDLDQELPEGADVEGVTIDSPDGLNVLRHSTAHVMAQAVQQLRPDAKL 91

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            IGP I DGFY+DFD  +PF+ ++L  +EK M +I+ ++  F+++ +S E+ARE    K 
Sbjct: 92  GIGPYITDGFYFDFDVAEPFTPEDLKTLEKMMLKIVNQNQKFVRRVVSEEEAREAM--KN 149

Query: 155 EAYKVEIL----ESIPAKENV---------TLYRQGE-------WFDLCRGPHVRSTGQV 194
           E YK+E+L    E+  A E V         T+Y   E       W DLCRGPH+ +T  +
Sbjct: 150 EPYKLELLGKKNEAAEAGEGVNVEVGAGDITIYDNVERKEGTTVWCDLCRGPHLPNTKLI 209

Query: 195 KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMD 254
              F L + + AYW G+     L RIYGTAW T+  L  Y   + E+E+RDHRKL  E+D
Sbjct: 210 SNAFALTRSSSAYWLGNQKNQQLQRIYGTAWPTKDALKAYQERIAEAERRDHRKLGSELD 269

Query: 255 LFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWD 312
           LF   ++ GSG+  +H KG  I + +  Y R R ++  YE + TP +   HL++ SGH D
Sbjct: 270 LFSFPDELGSGLPVFHPKGGIIRKEMEDYSRQRHVEAGYEFVYTPHITKGHLYEVSGHLD 329

Query: 313 SYRANMFAVKCADDTIKDLRT-------FALKPMNCPGHVAVFNHGLKSYRELPVRLAEF 365
            YR  MF     D  + +  T       + LKPMNCP H  +F    +SYRELP+RL EF
Sbjct: 330 WYRDGMFPAMHVDAELNEDGTVRKPGQDYYLKPMNCPMHNLIFRSRGRSYRELPLRLFEF 389

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
           GSVYR E SG +HGL RVRG TQDDAH++CT+EQM +E  K  N ++ + KD+G     +
Sbjct: 390 GSVYRYEKSGVVHGLTRVRGMTQDDAHIYCTREQMKDELTKTLNFVLGLLKDYGLNDFYL 449

Query: 426 KLSTR-PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL----GEGAFYGPKFE 480
           +LST+ PEK VG DA W++A         T+   +Q+   +G+ L    G  AFYGPK  
Sbjct: 450 ELSTKDPEKYVGEDAAWEEATR-------TLAEVAQE---SGLELVPDPGGAAFYGPKIS 499

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
              KDA+GR WQ  TIQ+DFNLP RF   +  +   +  PVMIHRA+FGSIERF+G++ E
Sbjct: 500 VQAKDALGRTWQMSTIQLDFNLPERFELEFQAADGTRQRPVMIHRALFGSIERFMGVLTE 559

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           ++ G  P WL+P+Q +   +  +  EY  ++ + LK+  +  E D  ++    KIR  S 
Sbjct: 560 HYAGAFPAWLAPVQVVGIPVAETFNEYMFDVVDQLKAAGIRAEVDTSSDRFPKKIRTASK 619

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            KIP ++I G  +A   ++  R    +    V + +A+  +T+
Sbjct: 620 DKIPFVLIAGGDDAEAGAVSFRFRDGSQDNGVPVAEAVKRITE 662


>gi|19386908|gb|AAL87030.1|AF332624_1 threonyl-tRNA-synthetase [Azotobacter vinelandii]
          Length = 461

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 229/443 (51%), Positives = 306/443 (69%), Gaps = 16/443 (3%)

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           D+CRGPHV +T +  K FKL K++GAY R D+    L R+YGTA + +Q L  Y+  +EE
Sbjct: 2   DMCRGPHVPNT-RFLKAFKLTKLSGAYSR-DAKNEQLQRVYGTAGHKKQ-LAAYIQRIEE 58

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQV 299
           +EKRDHRKL + +DLFH  E+  G++FWH  GW ++Q L  YMR   +++ Y EI TPQV
Sbjct: 59  AEKRDHRKLGKRLDLFHTQEEAPGMVFWHPNGWTVYQVLEQYMRAVQRENGYLEIKTPQV 118

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           +D+ LW++SGHW +Y  NMF       T  + R +A+KPMNCP HV V+N GLKSYRELP
Sbjct: 119 VDRVLWEKSGHWANYAENMFT------TESESRDYAIKPMNCPCHVQVYNQGLKSYRELP 172

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +RLAEFG+ +RNEPSG+LHG+MRVRGFTQDDAH+FCT+EQM  E      L   +Y DFG
Sbjct: 173 LRLAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEEQMQAESAAFIKLTRQVYADFG 232

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F+ I +KLSTRPE+RVGS  LWD AE  +   L++     +      +  GEGAFYGPK 
Sbjct: 233 FQDIQLKLSTRPERRVGSGELWDRAEEALAAALESAGLPYE------LQPGEGAFYGPKI 286

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           E+ LKD +GR WQCGT+Q+DFNLP R  A YV+ ++E+ HPVM+HRA+ GS ERFIGI+I
Sbjct: 287 EFSLKDCLGRVWQCGTLQLDFNLPVRLGAEYVSENNERQHPVMLHRAILGSFERFIGILI 346

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E+++G  P WL+P QA++  IT    E+A E+   L       + D RNE I +KIREH+
Sbjct: 347 EHYEGAFPAWLAPTQAVIMNITDKQGEFALEVERTLNQGGFRAKCDLRNEKIGFKIREHT 406

Query: 600 IKKIPIIIICGDKEASERSIGIR 622
           + K+P +++ GD+E    S+ +R
Sbjct: 407 LLKVPYLLVIGDREVETHSVAVR 429


>gi|186685902|ref|YP_001869098.1| threonyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
 gi|186468354|gb|ACC84155.1| threonyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
          Length = 611

 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 239/580 (41%), Positives = 360/580 (62%), Gaps = 21/580 (3%)

Query: 69  SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQE 128
           +L  IRH+ +H+MA AVQ ++P+ QV IGP IE+GFYYDFD  +PFS ++L  I+K+M +
Sbjct: 28  NLKKIRHTASHVMAMAVQKLFPKAQVTIGPWIENGFYYDFDSPEPFSENDLKAIKKEMAK 87

Query: 129 IIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG-EWFDLCRGPH 187
           II R  P +++ +S E+A    +  KE YK+EIL  I   E +T+Y  G EW+DLC GPH
Sbjct: 88  IINRKLPVIREEVSREEAARRIQEIKEPYKLEILADI-KNEPITIYHLGNEWWDLCAGPH 146

Query: 188 VRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDH 246
           + +  ++  K  +L  VAGAYWRGD  +  L RIY TAW + ++L +Y    EE+ +RDH
Sbjct: 147 LENISELNPKAIELESVAGAYWRGDETKAQLQRIYATAWESPEQLAEYKRRKEEALRRDH 206

Query: 247 RKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHL 304
           RKL +E+ LF  ++  G G+  W  KG  +  TL  ++++ ++K  Y  + TP +    L
Sbjct: 207 RKLGKELGLFIFSDLVGPGLPLWTPKGTLLRSTLEDFLKQEQVKRGYLSVVTPHIARVDL 266

Query: 305 WQQSGHWDSYRANMFAVKCADD-TIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           ++ SGHW  Y+ +MF +   D+      + F +KPMNCP H+ ++   L+SYRELP+RLA
Sbjct: 267 FKTSGHWQKYKEDMFPLMADDEEAAAQEQGFVMKPMNCPFHIQIYKSELRSYRELPMRLA 326

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFG+VYR E SG L GL RVRGFT DD+H+F T EQ+ +E L + +LI+S++     +  
Sbjct: 327 EFGTVYRYEQSGELGGLTRVRGFTVDDSHLFVTPEQLDSEFLSVVDLILSVFNKLQLKNF 386

Query: 424 MVKLSTR---PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
             +LS R    +K +GSD +WD AE  ++  ++T+     + I      GE AFYGPK +
Sbjct: 387 KARLSFRDPASDKYIGSDEVWDKAEGAIRRAVETLGMEHFEGI------GEAAFYGPKLD 440

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           +I  DA+ R+WQ GT+QVD+NLP RF   YV     +  PVMIHRA FGS+ER IGI+IE
Sbjct: 441 FIFSDALDREWQLGTVQVDYNLPERFELEYVAEDGVRKRPVMIHRAPFGSLERLIGILIE 500

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
            + G+ PLWL+P+QA +  +  + +++A+++   +++  +  E D   + +  +IR    
Sbjct: 501 EYAGDFPLWLAPVQARLLPVGDTQLDFAKDVVAKMRALGIRAEVDTSGDRLGKQIRNAEK 560

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
           +KIP++ + G KE    ++ IR      T+    L  IP+
Sbjct: 561 EKIPVMAVVGAKEVETNTLSIR------TRASGELGVIPV 594


>gi|220905829|ref|YP_002481140.1| threonyl-tRNA synthetase [Cyanothece sp. PCC 7425]
 gi|219862440|gb|ACL42779.1| threonyl-tRNA synthetase [Cyanothece sp. PCC 7425]
          Length = 610

 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 239/599 (39%), Positives = 367/599 (61%), Gaps = 15/599 (2%)

Query: 53  PVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ 112
           PV    I +    +  +L  IRH+ +H+MA AVQ ++P+ QV IGP IE+GFYYDFD   
Sbjct: 11  PVSIAKIALPRTSESETLKKIRHTASHVMAMAVQKLFPKAQVTIGPWIENGFYYDFDNPD 70

Query: 113 PFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVT 172
           PF+  +L  I+K+M +II R  P +++ +S E+A    ++  E YK+EIL  I + E +T
Sbjct: 71  PFTEKDLKAIQKEMVKIIKRKLPVIREEISREEAERRIKAINEPYKLEILADIQS-EPIT 129

Query: 173 LYRQG-EWFDLCRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQE 230
           +Y  G +W+DLC GPH+ +TG++      L  VAGAYWRGD  +  L RIYGTAW T ++
Sbjct: 130 IYHLGDQWWDLCAGPHLENTGELHPDAIALESVAGAYWRGDETKAQLQRIYGTAWETPEQ 189

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRR-KIK 288
           L +Y    EE+++RDHRKL +E+ LF  ++  G G+  W  KG  +  TL  ++++ ++K
Sbjct: 190 LAEYQRRKEEAQRRDHRKLGKELGLFIFSDLVGPGLPLWTPKGTILRSTLEDFLKQEQLK 249

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT-FALKPMNCPGHVAV 347
             Y+ + +P +    L++ SGHW  Y+ +MF +   D+  +     F +KPMNCP H+ +
Sbjct: 250 RGYQPVVSPHIARVDLFKTSGHWQKYKEDMFPLMSEDEQERQSEVGFVMKPMNCPFHIQI 309

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
           +   L+SYR+LP+RLAEFG+VYR E SG L GL RVRGFT DD+H+F T  Q+ +E LK+
Sbjct: 310 YKSELRSYRDLPMRLAEFGTVYRYEQSGELGGLTRVRGFTVDDSHLFVTPSQLDDEFLKV 369

Query: 408 HNLIISIYKDFGFEKIMVKLSTR---PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            +LI+S++     +    +LS R    +K +GSD  W+ A+  ++  ++T+     + I 
Sbjct: 370 VDLILSVFAQLQLKNFKARLSFRDPNSDKYIGSDQAWEKAQTAIRQAVETLGMDHFEGI- 428

Query: 465 TGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIH 524
                GE AFYGPK ++I +DA+ R+WQ GT+QVD+NLP RF   YV     +  PVMIH
Sbjct: 429 -----GEAAFYGPKLDFIFQDALEREWQLGTVQVDYNLPERFELEYVAEDGSRQRPVMIH 483

Query: 525 RAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIET 584
           RA FGS+ER IGI+IE + G+ PLWL+P Q  + T+    + +A+++A  +++  + +  
Sbjct: 484 RAPFGSLERLIGILIEEYAGDFPLWLAPEQVRLLTVGDDQMPFARQVAEQMQALGVRVVI 543

Query: 585 DFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           D   + +  KIR    +KIP++ + G KE    S+ IR   +     +S+ + +  L K
Sbjct: 544 DTSGDRLPKKIRNAEKEKIPVMAVIGAKEVEADSLSIRTRAAGELGVISVPEVVERLAK 602


>gi|170077251|ref|YP_001733889.1| threonyl-tRNA synthetase [Synechococcus sp. PCC 7002]
 gi|169884920|gb|ACA98633.1| threonyl-tRNA synthetase [Synechococcus sp. PCC 7002]
          Length = 604

 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 243/580 (41%), Positives = 356/580 (61%), Gaps = 22/580 (3%)

Query: 69  SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQE 128
           +L  IRH+ +H+MA AVQ ++P+ QV IGP  E+GFYYDFDK +PF+  +L  I+K+M +
Sbjct: 22  TLKRIRHTTSHVMAMAVQKLFPDAQVTIGPWTENGFYYDFDKPEPFTEADLKAIKKEMVK 81

Query: 129 IIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG-EWFDLCRGPH 187
           I+ +  P +++ +S  +A +  +   E YK+EIL  I   + +TLY  G +W+DLC GPH
Sbjct: 82  IVKKKLPVVREEISRAEAEKRIKEINEPYKLEILAGI--HDPITLYYLGDQWWDLCAGPH 139

Query: 188 VRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDH 246
           V +TG +  K   L  VAGAYWRGD N   L RIYGTAW T ++L +Y    EE+ KRDH
Sbjct: 140 VENTGDINPKAIALESVAGAYWRGDENNQQLQRIYGTAWETPEQLKEYQRRKEEALKRDH 199

Query: 247 RKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHL 304
           RKL RE+ LF  ++  G G+  W  KG  I  TL ++++  + K  Y+ + TP +    L
Sbjct: 200 RKLGRELGLFMFSDQVGPGLPLWTPKGTLIRSTLENFLKAEQTKRGYQGVVTPHIARVDL 259

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDL-RTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           ++ SGHW +YR +MF +    D  +   + F +KPMNCP H+ ++   L+SYRELP+RLA
Sbjct: 260 FKVSGHWQNYREDMFPMMADGDAERAAEQGFVMKPMNCPFHIQIYKDQLRSYRELPIRLA 319

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFG+VYR E SG L GL RVRGFT DD+H+F T +Q+  E   + +LI++++K    +  
Sbjct: 320 EFGTVYRYEQSGELGGLTRVRGFTVDDSHLFVTPDQLEAEFFNVVDLILTVFKSLQLKNF 379

Query: 424 MVKLSTR---PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
             +LS R    +K +GSD +W+ A+N ++  +  +       ++     GE AFYGPK +
Sbjct: 380 KARLSFRDPNSDKYIGSDEVWEKAQNAIRKAVTKLD------MDYFEAEGEAAFYGPKLD 433

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           +I +D + R+WQ GT+QVD+NLP RF   YV  H ++  P+MIHRA FGS+ER IGI+IE
Sbjct: 434 FIFQDVLEREWQLGTVQVDYNLPERFELEYVTEHGDRQRPIMIHRAPFGSLERLIGILIE 493

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
            + G+ PLWL+P Q  +  ++    +YA+E A  L++  +    D   E +   IR    
Sbjct: 494 EYAGDFPLWLAPEQVRILPVSDEFYDYAKEQAAKLQAMGIRAVADASGERLGKLIRNAEK 553

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
           +KIP++ I G KE    S+ IR      T+    L AIP+
Sbjct: 554 QKIPVMAIAGAKEVEANSLSIR------TRASGELGAIPM 587


>gi|237750837|ref|ZP_04581317.1| threonyl-tRNA synthetase [Helicobacter bilis ATCC 43879]
 gi|229373282|gb|EEO23673.1| threonyl-tRNA synthetase [Helicobacter bilis ATCC 43879]
          Length = 612

 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 236/558 (42%), Positives = 354/558 (63%), Gaps = 19/558 (3%)

Query: 67  PRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKM 126
           P +  +IRH+CAH++AEA+++++PE +  +GP++++GFYYDF  +     D+LA IE KM
Sbjct: 38  PNAHEIIRHTCAHLLAEAIKALYPEAKFFVGPVVDEGFYYDFKVDSKIGVDDLATIESKM 97

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGP 186
           +EI  +     K +LS ++A E F    +  K  ++  I   ++ ++Y+QG++ DLCRGP
Sbjct: 98  KEIAKKGHKLTKIHLSRKEAIERFSG--DELKQAVMSKIEG-DDFSIYQQGDFEDLCRGP 154

Query: 187 HVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDH 246
           H+    ++ + FKL K++GAY  GD +  +L+RIYG A+  ++ L QYL+ LEE++KRDH
Sbjct: 155 HLPHL-KLLQAFKLTKISGAYLGGDEDSEVLTRIYGIAFAEKENLKQYLFQLEEAKKRDH 213

Query: 247 RKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHL 304
           RKL  EM+LF   ED G+G+  W  KG ++ + +   + R  I ++YE +  P++L   +
Sbjct: 214 RKLGVEMELFTFEEDVGAGLPIWLPKGARLRRRIEELLTRALILNEYEPVRCPEILKSDV 273

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W+ SGH+  Y+ NM+       T  D   + +KPMNC GH+ V+ + ++SYRELP+R  E
Sbjct: 274 WKISGHYTHYKENMYF------TTIDEVEYGIKPMNCVGHIKVYQNSIRSYRELPLRFYE 327

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           +G V+R+E SG LHGL+RVR FTQDDAH+FC  EQ+ NE   I      I   FGF   M
Sbjct: 328 YGVVHRHEKSGVLHGLLRVREFTQDDAHIFCRPEQIENEVNNILRFTHKIMNAFGFSYEM 387

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
            +LSTRPE+ +G D++W+ A   ++  L      + + I+  V  G GAFYGPK +  + 
Sbjct: 388 -ELSTRPEQSIGEDSVWESATLALQNAL------AGNNISYQVDEGGGAFYGPKIDIKIT 440

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           DAIGR WQCGTIQ+D NLP RFN  Y++ ++E   PVMIHRA+ GS ERF+ I+ E+F G
Sbjct: 441 DAIGRKWQCGTIQIDMNLPERFNLSYIDENNEHAMPVMIHRAILGSFERFVAILTEHFGG 500

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P +++P Q I+  I  S V  AQ + N L+   +  E   +NE++N KIR    +K+P
Sbjct: 501 EFPFFIAPTQVIIIPINESHVSMAQNLQNELRLRGIYAELSLKNESLNKKIRTAEKQKVP 560

Query: 605 IIIICGDKEASERSIGIR 622
           +I + GDKE +  S+ IR
Sbjct: 561 MIALIGDKELNNNSVSIR 578


>gi|291571004|dbj|BAI93276.1| threonyl-tRNA synthetase [Arthrospira platensis NIES-39]
          Length = 604

 Score =  474 bits (1221), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 238/561 (42%), Positives = 354/561 (63%), Gaps = 20/561 (3%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           L  IRH+ +H+MA AVQ ++P+ QV IGP IE+GFYYDFD  +PF+  +L  I+K+M +I
Sbjct: 27  LKRIRHTTSHVMAMAVQKLFPKAQVTIGPWIENGFYYDFDSPEPFTEQDLKAIKKEMVKI 86

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG-EWFDLCRGPHV 188
           + R  P +++ +S E+A+   E+  E YK+EIL  +   E +T+Y  G +W+DLC GPHV
Sbjct: 87  LKRKLPVIREEVSREEAQRRIETLGEPYKLEILADL--TEPITIYHLGDQWWDLCAGPHV 144

Query: 189 RSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHR 247
            +TG +  K  +L  VAGAYWRGD  +  L RIYGTAW T ++L +Y    EE+ +RDHR
Sbjct: 145 ETTGDINPKAIELESVAGAYWRGDETKAQLQRIYGTAWETPEQLAEYKRRKEEALRRDHR 204

Query: 248 KLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLW 305
           +L +E+ LF  ++  G G+  W  KG  +  TL  +++R +++  Y+ + TP +   +L+
Sbjct: 205 RLGKELGLFIFSDQVGPGLPLWTPKGTILRTTLEDFLKREQVRRGYQPVVTPHLGRVNLF 264

Query: 306 QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEF 365
           + SGHW  YR ++F +    +       F LK MNCP HV ++   L+SYRELP+RLAEF
Sbjct: 265 KTSGHWQKYREDLFPMMGESED----EGFVLKAMNCPFHVQIYKSSLRSYRELPIRLAEF 320

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK-IM 424
           G+VYR E SG L GL RVRGFTQDDAH+F T EQ+ +E LK+ +LI S+ K    ++   
Sbjct: 321 GTVYRYEQSGELGGLTRVRGFTQDDAHLFVTPEQLDDEFLKVVDLIQSVLKKLKLDQSFK 380

Query: 425 VKLSTR---PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            +LS R    +K +GSD  W+ AEN ++  ++T+       +N    +GE AFYGPK ++
Sbjct: 381 ARLSFRDPNSDKYIGSDQAWEKAENAIRRAVETLG------MNYFEGIGEAAFYGPKLDF 434

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
           I++DA+ R+WQ GT+QVD+NLP RF+  YV     +  PVMIHRA FGS+ER IGI+IE 
Sbjct: 435 IVQDALEREWQLGTVQVDYNLPERFDLEYVAEDGTRQRPVMIHRAPFGSLERLIGILIEE 494

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G+ PLWL+P+   +  ++   + + + +A   +S  +  E D  ++ +   IR     
Sbjct: 495 YTGDFPLWLAPVMVRLLPVSDEFLPFVESVAEKWRSLDIRAEADHSHDRLGKMIRNAEKA 554

Query: 602 KIPIIIICGDKEASERSIGIR 622
           K+P++ + G KE    S+ IR
Sbjct: 555 KVPVMAVVGAKEVESNSLSIR 575


>gi|300726434|ref|ZP_07059882.1| threonine--tRNA ligase [Prevotella bryantii B14]
 gi|299776282|gb|EFI72844.1| threonine--tRNA ligase [Prevotella bryantii B14]
          Length = 654

 Score =  474 bits (1221), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 248/640 (38%), Positives = 394/640 (61%), Gaps = 21/640 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K+TFPDGS++ +    TG  +AESIS +LA+  V+  +NG+V +L+ P+ ++ ++E+  
Sbjct: 2   VKITFPDGSVREYEEGVTGLQIAESISPALARNVVSCGVNGEVVELNRPITKDAAVELYK 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF--DKEQPFSSDELAQ 121
            ED +      H+ AH++AEA+Q ++P +Q   GP IE+GF+YD    K    S ++  +
Sbjct: 62  FEDEQGKHTFWHTSAHLLAEALQELYPGIQFGFGPAIENGFFYDVMPPKGVTISENDFPK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE KM+E+  +D   +++ ++   A + F++  + YK E ++   A  ++T Y QG + D
Sbjct: 122 IEAKMKELAKKDEAVVRKEIAKADALKEFKADGQDYKCEHIDLDLADGSITTYTQGNFTD 181

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LC+GPH+ STG +K   K+  VAGA+WRGD+ R  ++RIYG ++  ++ L +YL  LEE+
Sbjct: 182 LCKGPHLVSTGDIKAV-KITSVAGAFWRGDAKREQMTRIYGISFPKKKMLDEYLVMLEEA 240

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQV 299
           +KRDHRK+ +EM+LF  +E  G G+  W  KG ++   L   +RR +K  +Y+E+ TP +
Sbjct: 241 KKRDHRKIGKEMELFMFSERVGKGLPIWLPKGTQLRLRLQELLRRVLKPYNYQEVITPGI 300

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             ++L+  SGHW  Y  + F       T ++   + LKPMNCP H  ++    +SY++LP
Sbjct: 301 GSKNLYITSGHWAHYGKDAFQ---PIHTPEEDEEYMLKPMNCPHHCEIYARKPRSYKDLP 357

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AEFG+V+R E SG LHGL RVR FTQDDAH+F   +Q+  E     ++I  ++  FG
Sbjct: 358 LRIAEFGTVFRYEKSGELHGLTRVRTFTQDDAHIFVRPDQVKAEFENNIDIIQKVFSIFG 417

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL-GEGAF 474
           F     ++S R     EK +GSD +W++++N        I+ + +++    V   GE AF
Sbjct: 418 FNDYEAQISLRDPKDTEKYIGSDEIWEESQN-------AIREACKEKGLKAVEEEGEAAF 470

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK ++++KDAIGR WQ GTIQVD+NLP RF   Y +  + K  PVMIHRA FGS+ERF
Sbjct: 471 YGPKLDFMVKDAIGRRWQLGTIQVDYNLPERFKLEYTDVDNTKKTPVMIHRAPFGSLERF 530

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             ++IE+  G  PLWL P Q  +  I+    +YA+++   L  H +    D RNE +  K
Sbjct: 531 TAVLIEHTAGRFPLWLIPDQVAILPISEKYNDYAKKVKAYLDKHDVRGYIDDRNEKVGRK 590

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           IR++ +K++P ++I G+KEA    + +R+ G      +++
Sbjct: 591 IRDNELKRVPYMVIVGEKEAEGGLVSMRKQGGGDQASMTM 630


>gi|313126275|ref|YP_004036545.1| ser-tRNA(thr) hydrolase; threonyl-tRNA synthetase [Halogeometricum
           borinquense DSM 11551]
 gi|312292640|gb|ADQ67100.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Halogeometricum
           borinquense DSM 11551]
          Length = 641

 Score =  474 bits (1221), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 255/636 (40%), Positives = 378/636 (59%), Gaps = 23/636 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEI 61
           S++ +  PDGS  +    AT  DVA  I   L +  VA  ++G++ D + PV +G+ + I
Sbjct: 2   SELVVNLPDGSELSVEEGATVEDVAYEIGPGLGEDTVAGVVDGELVDKAAPVHDGAQVVI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +T +    L V+RH+ AH+ A+A+Q ++PE ++AIGP  ++GFYYD        +D+L  
Sbjct: 62  VTDQSDEYLRVLRHTAAHVFAQALQRLYPEAKLAIGPSTDEGFYYDV-TNVDLDADDLEA 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWF 180
           IE +M+EII  D P  ++  S E A EL+E     YK +ILE+  A ++ ++ Y QGE+ 
Sbjct: 121 IEDEMEEIIEEDLPVERELRSREDALELYEEN--PYKRDILENEAAGDDELSFYVQGEFE 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLC+GPHV STG++    +L+ ++ AYWRGD     L+R+YGTA+ ++++L +Y+    E
Sbjct: 179 DLCKGPHVESTGKIGAV-ELLNISSAYWRGDEENETLTRVYGTAFESEKDLKEYMELRAE 237

Query: 241 SEKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           +E+RDHRK+ REMDLF I E  G G+  +H  G +I   L  +     +  DYE + TP 
Sbjct: 238 AEERDHRKIGREMDLFSIPEVTGPGLPLYHPNGKRILSELSEFAESLNLDADYEPVETPH 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW++SGH+D+Y  +MF +   D+       + LKPMNCPGH  +F+    SYR+L
Sbjct: 298 LFRTELWKKSGHYDNYVDDMFLLDVNDEE------YGLKPMNCPGHATIFDQNSWSYRDL 351

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           PVR  E G VYR E  G L GL RV  FT DD H+FC  EQ+  E  ++ N I  +   F
Sbjct: 352 PVRYFEDGKVYRKEQRGELSGLSRVWSFTIDDGHLFCRPEQIEQEIRQVMNSIYEVLDTF 411

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           G E   V L+TRPEK VGSD +W+ +E+ ++ VL+         I+  +  G+GAFYGPK
Sbjct: 412 GLEA-HVALATRPEKSVGSDEIWEQSESQLRSVLEN------QNIDYDLEPGDGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++  +DA+GR W   T+QVDFN+P RF+  Y    +E+  PVMIHRA++GS ERF  ++
Sbjct: 465 IDFSFEDALGRKWDGPTVQVDFNMPERFDLTYTGEDNEEHRPVMIHRALYGSYERFFMVL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+F G  P WL+P Q  +  I+   + YA  + N L    +S+E   R+ T+  KIRE 
Sbjct: 525 IEHFNGKFPFWLAPEQVRILPISDDQLGYAHRVKNELGDFRVSVED--RSWTLGRKIREG 582

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
               +P ++I G+ E    +I +R       Q VS+
Sbjct: 583 QEDNVPYMLIVGENEEESGTISVRDRQEREEQDVSI 618


>gi|145348306|ref|XP_001418593.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144578823|gb|ABO96886.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 564

 Score =  474 bits (1221), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 243/568 (42%), Positives = 350/568 (61%), Gaps = 20/568 (3%)

Query: 81  MAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQY 140
           MA AVQ ++P  Q  IGP I+ GFYYDF   + F+  ++ +I+K+M +II +D P  ++ 
Sbjct: 1   MAMAVQKVFPSAQCTIGPWIDRGFYYDFYYPEGFTDQDMKKIQKEMYKIIRKDYPLRREE 60

Query: 141 LSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG-EWFDLCRGPHVRSTGQV-KKFF 198
           +S E+A        E YK+EILE+I   E +T+Y  G EW+DLC GPHV STG++ +K F
Sbjct: 61  VSREEAERRIREINEPYKLEILEAIKT-EPITIYHIGDEWWDLCAGPHVESTGKLDQKAF 119

Query: 199 KLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI 258
            L  +AGAYWRGD  +PML RIYGTAW  + +L  Y  F  E+++RDHR + +++ LF +
Sbjct: 120 ALESLAGAYWRGDETKPMLQRIYGTAWENEAQLQAYNDFKAEAKRRDHRTIGKDLGLFSL 179

Query: 259 AED--GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYR 315
            +D  G G++FWH KG  +   + +Y +   +   YE + +P V  Q LW+ SGH D Y 
Sbjct: 180 QQDNAGGGLVFWHPKGAHMRHMIETYWKDLHLARGYELLYSPHVARQELWKTSGHSDFYS 239

Query: 316 ANMFA-VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
            NM+  +K  D+       + LKPMNCP H+ V+  G  SY++LP+R AE G+VYR E S
Sbjct: 240 ENMYQPIKVEDEM------YQLKPMNCPFHIVVYQDGYYSYKDLPIRWAELGTVYRYERS 293

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
           G++HGL RVRGFTQDDAH+FC  +Q+ +E   + +L   I   FGF++  V LSTRPEK 
Sbjct: 294 GTMHGLFRVRGFTQDDAHIFCLPDQITDEIKSVLDLTEEILSTFGFKEFEVNLSTRPEKS 353

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           VG D +WD AE  +K   D ++    D I   V  G GAFYGPK +  + DAIGR WQC 
Sbjct: 354 VGDDKIWDTAEGALK---DALQMKGWDYI---VDDGGGAFYGPKIDIKILDAIGRKWQCS 407

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQ 554
           T+Q+DFNLP RF+  YV+  + K  P+MIHRA+FGS+ERF GI+ EN+ G  PLWL+PIQ
Sbjct: 408 TVQLDFNLPERFDLSYVDRENAKQRPIMIHRAIFGSLERFFGILTENYAGEFPLWLAPIQ 467

Query: 555 AIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
             +  +T    +Y + +A  L+   + +E     + +   +R     KIP++ + G +EA
Sbjct: 468 VRLLPVTDEVSDYTEGVAKKLRDAGVRVEI-CTGQRLAKLVRTAEKAKIPVMAVVGREEA 526

Query: 615 SERSIGIRRFGSTTTQKVSLLDAIPILT 642
              ++ +R F       +S+ + +  +T
Sbjct: 527 ENNTLAVRTFKDGDVGTLSVDEVLSRVT 554


>gi|256826891|ref|YP_003150850.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Cryptobacterium
           curtum DSM 15641]
 gi|256583034|gb|ACU94168.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Cryptobacterium
           curtum DSM 15641]
          Length = 586

 Score =  474 bits (1221), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 242/584 (41%), Positives = 360/584 (61%), Gaps = 19/584 (3%)

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQI 122
           PED   L V+RHS AHI+A+AV+ ++PE +   GP  ++GFYYD D  +   S D+L  I
Sbjct: 14  PED-EELHVLRHSAAHILAQAVKRLYPEARFGYGPANDNGFYYDIDLGDAKISEDDLPTI 72

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E ++++I+  +  F    L  E+A +    + E+YK E +  +P    +T Y+QGE+ D+
Sbjct: 73  EAEIKKIVKENLKFTVFELPREEAVKFMTERGESYKAEHIGDLPEDTRLTFYQQGEYVDM 132

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPH+  T  +K F KL  V+GAYW+GD+   ML+RI G A+ T++EL  +   L E+E
Sbjct: 133 CVGPHITYTKALKAF-KLTNVSGAYWKGDAANKMLTRIGGVAFRTKEELVHHEELLAEAE 191

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQVLD 301
           KRDHRK+ REM+LF +A++G G  FW   G ++   L  Y M  +    YE+++TP +L 
Sbjct: 192 KRDHRKIGREMELFMMADEGPGFPFWLPNGMRLKNALTQYWMEMQEAYGYEQVDTPIILS 251

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHWD Y+ NM+       T+ D   +A+KPMNCPG   ++    +SYR+LP++
Sbjct: 252 RKLWETSGHWDHYKENMYT------TVIDDEDYAVKPMNCPGACLIYKSKPRSYRDLPLK 305

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAE G  +R+E  G+LHGL RVR FTQDDAH+F   +Q+  +     +LI + Y+ FGF 
Sbjct: 306 LAEAGKDHRHELKGALHGLFRVRAFTQDDAHLFIRPDQITEQVTDTAHLITAYYEQFGF- 364

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRP+  +GSD  W  AE  ++  L+ +       ++  +  G+GAFYGPK ++
Sbjct: 365 PYRVELSTRPDDSMGSDEDWALAEEGLRQALEAMG------VDYTLNEGDGAFYGPKIDF 418

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L+D +GR WQCGTIQ+DF LP  F   Y +S   K  P++IHRA FGS ERFIG++ E 
Sbjct: 419 HLQDCLGRTWQCGTIQLDFQLPQNFELEYTDSDGSKKRPILIHRAGFGSFERFIGMLTEQ 478

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE-HSI 600
           + G  P WLSP+Q  V  ++    EY+++IA+ L+   + ++ D R+E I YKIRE  S+
Sbjct: 479 YAGKFPTWLSPLQVKVLPVSEKHREYSRQIADKLRQAGVRVKVDERDEKIGYKIREARSV 538

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            ++P ++I G+ E    +I +R   + T Q+ SL D I  +  E
Sbjct: 539 DRVPYMLILGEVEEEAGNISVRDRSNETVQR-SLDDFITDIQAE 581


>gi|220912797|ref|YP_002488106.1| threonyl-tRNA synthetase [Arthrobacter chlorophenolicus A6]
 gi|254783507|sp|B8H9E8|SYT_ARTCA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|219859675|gb|ACL40017.1| threonyl-tRNA synthetase [Arthrobacter chlorophenolicus A6]
          Length = 669

 Score =  474 bits (1220), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 256/643 (39%), Positives = 373/643 (58%), Gaps = 47/643 (7%)

Query: 36  KKAVAVAINGKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           +  V   +NG++ DL   + EG+ +E +T E P  L V+RHS AH+MA+AVQ + P+ ++
Sbjct: 32  RDVVVARVNGELKDLDQELPEGAEVEGVTIESPDGLNVLRHSTAHVMAQAVQQLRPDAKL 91

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            IGP I DGFY+DFD  +PF+ ++L  +EK MQ+II ++  F+++ +S ++ARE    K 
Sbjct: 92  GIGPYITDGFYFDFDVAEPFTPEDLKTLEKMMQKIINQNQKFVRRVVSEDEAREAM--KN 149

Query: 155 EAYKVEIL----ESIPAKENV---------TLYRQGE-------WFDLCRGPHVRSTGQV 194
           E YK+E+L    E+  A E V         T+Y   E       W DLCRGPH+ +T  +
Sbjct: 150 EPYKLELLGKKNEAAEAGEGVNVEVGAGDITIYDNVERKEGTTVWCDLCRGPHLPNTKLI 209

Query: 195 KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMD 254
              F L + + AYW G+     L RIYGTAW T+  L  Y   + E+E+RDHRKL  E+D
Sbjct: 210 SNAFALTRSSSAYWLGNQKNQQLQRIYGTAWPTKDALKAYQERIAEAERRDHRKLGSELD 269

Query: 255 LFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWD 312
           LF   ++ GSG+  +H KG  I + +  Y R R ++  YE + TP +   HL++ SGH D
Sbjct: 270 LFSFPDELGSGLPVFHPKGGIIRKEMEDYSRQRHVEAGYEFVYTPHITKGHLYEVSGHLD 329

Query: 313 SYRANMFAVKCADDTIKDLRT-------FALKPMNCPGHVAVFNHGLKSYRELPVRLAEF 365
            Y+  MF     D  + +  T       + LKPMNCP H  +F    +SYRELP+RL EF
Sbjct: 330 WYKEGMFPAMHVDAELNEDGTVRKPGQDYYLKPMNCPMHNLIFRSRGRSYRELPLRLFEF 389

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
           GSVYR E SG +HGL RVRG TQDDAH++CT+EQM  E  K    ++ + KD+G     +
Sbjct: 390 GSVYRYEKSGVVHGLTRVRGMTQDDAHIYCTREQMKEELTKTLTFVLDLLKDYGLNDFYL 449

Query: 426 KLSTR-PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL----GEGAFYGPKFE 480
           +LST+ PEK VG DA W++A         T+   +Q+   +G+ L    G  AFYGPK  
Sbjct: 450 ELSTKDPEKYVGEDAAWEEATR-------TLAEVAQE---SGLELVPDPGGAAFYGPKIS 499

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
              KDA+GR WQ  TIQ+DFNLP RF   +  +   +  PVMIHRA+FGS+ERF+G++ E
Sbjct: 500 VQAKDALGRTWQMSTIQLDFNLPERFELEFQAADGSRQRPVMIHRALFGSVERFMGVLTE 559

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           ++ G  P WL+P+Q +   +  +  EY  ++ + LK+  +  E D  ++    KIR  S 
Sbjct: 560 HYAGAFPAWLAPVQVVGIPVAETFNEYMFDVVDQLKAAGIRAEVDTSSDRFPKKIRTASK 619

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            KIP ++I G  +A   ++  R    +    V + +A+  +T+
Sbjct: 620 DKIPFVLIAGGDDAEAGAVSFRFRDGSQDNGVPVAEAVKRITE 662


>gi|297243465|ref|ZP_06927397.1| threonyl-tRNA synthetase [Gardnerella vaginalis AMD]
 gi|296888510|gb|EFH27250.1| threonyl-tRNA synthetase [Gardnerella vaginalis AMD]
          Length = 660

 Score =  474 bits (1220), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 252/634 (39%), Positives = 372/634 (58%), Gaps = 45/634 (7%)

Query: 36  KKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           K  +AV +NG++ DL  P+ +G ++E +  +    +A++RHS  H+MA+AVQ I P+ ++
Sbjct: 15  KNIIAVRLNGELRDLYTPLHDGDTVESVALDSEDGIAIMRHSATHVMAQAVQEIRPDAKL 74

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            +GP+I+DGFYYDFD + PF+ D+L QIEK MQ II     F ++ ++ ++AR   E   
Sbjct: 75  GVGPVIKDGFYYDFDVDTPFTPDDLKQIEKHMQRIIKESQSFRRRVVTEDEARA--EEAN 132

Query: 155 EAYKVEILESIPA-----------KENVTLY----RQGE--WFDLCRGPHVRSTGQVKKF 197
           + YK+E++    A           K  +++Y    R+G   W DLCRGPH+ +T  +K F
Sbjct: 133 QPYKLELIGDKEAALDPAAAGEISKHELSMYDNLDREGNKVWSDLCRGPHLPNTRYIKAF 192

Query: 198 FKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFH 257
            KL +VA AYWRG  + PML RIYGTAW +++EL  Y   +EE+ KRDHRKL +EMDLF 
Sbjct: 193 -KLERVAAAYWRGSEHNPMLQRIYGTAWPSKEELKAYTTRMEEAAKRDHRKLGQEMDLFS 251

Query: 258 IAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYR 315
             ++ G G+  +H KG  I   +  Y R +  K  Y  + TP +    L++ SGH   Y+
Sbjct: 252 FPDEIGPGLAVFHPKGAAIINAMEDYSREQHRKHHYSFVQTPHITKGGLYETSGHLQWYK 311

Query: 316 ANMFAVKCAD-------DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV 368
             M+     D       +  +    + LKPMNCP H  +F    +SYRELP+RL EFG+V
Sbjct: 312 DGMYPPMKLDEERDENGNVTRQGADYYLKPMNCPMHNLIFKSRQRSYRELPLRLFEFGTV 371

Query: 369 YRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLS 428
           YR E SG +HGL RVRG TQDD+H++CT+EQM +E   + N ++ + KDFG     ++LS
Sbjct: 372 YRYEKSGVVHGLTRVRGLTQDDSHIYCTREQMRDELKSLLNFVLGLLKDFGLNDFYLELS 431

Query: 429 TRPE-KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAI 487
           T+ E K VGSD +W++A N +  V    K S  + ++     G  AFYGPK     +DAI
Sbjct: 432 TKDEHKFVGSDEIWEEATNTLAEV---AKESGLELVDDP---GGAAFYGPKISVQARDAI 485

Query: 488 GRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           GR WQ  TIQ+DFNLP RF   Y+ +      PVMIHRA+FGSIERF  I++E++ G  P
Sbjct: 486 GRTWQVSTIQLDFNLPERFKLEYIAADGSHQRPVMIHRALFGSIERFFAILLEHYAGAFP 545

Query: 548 LWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIII 607
            WL+P+Q     +      + Q++ + L+ + +  E D  ++    KIR  S  K+P  +
Sbjct: 546 AWLAPVQVTGVPVADEFAPHLQKLISDLEENMVRCEMDNSDDRFGKKIRNASKSKVPFTL 605

Query: 608 ICGDKEASERSIGIR-RFGSTTTQKVSLLDAIPI 640
           I G+++ +  ++  R R GS        L+ +P+
Sbjct: 606 IAGEEDVNNNAVSFRFRDGSQ-------LNGVPV 632


>gi|57506155|ref|ZP_00372076.1| threonyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
 gi|57015550|gb|EAL52343.1| threonyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
          Length = 602

 Score =  474 bits (1220), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 249/616 (40%), Positives = 374/616 (60%), Gaps = 22/616 (3%)

Query: 34  LAKKAVAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQ 93
           + K+ +A   NG + D          ++       +L V+RHSCAH+MA+A+++++PE +
Sbjct: 1   MEKEVIAYQNNGVLIDTQSATNLDFEKVYFDNSKEALEVLRHSCAHLMAQAIKTLYPEAK 60

Query: 94  VAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESK 153
             +GP+IEDGFYYDF      + ++L +IEKKM+E         K  LS ++A E F  K
Sbjct: 61  FFVGPVIEDGFYYDFRVNSKLNEEDLIKIEKKMKEFAEAKLEIQKYTLSKQEALEKF--K 118

Query: 154 KEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSN 213
            +  K E+L  IP+ E V++Y+QGE+ DLCRGPH  +T +  +FFKL ++AGAY  GD  
Sbjct: 119 DDDLKQEVLAKIPSDE-VSIYKQGEFEDLCRGPHAPNT-KFLRFFKLTRIAGAYLGGDEK 176

Query: 214 RPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKG 272
           R ML+RIYGTA+  ++ L +YL+ +EE+ KRDHRKL  E+ LF   E  G G+  W   G
Sbjct: 177 REMLTRIYGTAFADKESLKEYLHIIEEARKRDHRKLGSELKLFTFDEQIGGGLPIWLSNG 236

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ ++ +  M  KI     YE +  P++L    W+ SGH+ +Y+ NM+          D
Sbjct: 237 TRL-RSKLEQMLYKIHRLRGYEPVRGPELLKAEAWKISGHYANYKENMYFTNI------D 289

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
            + + +KPMNC GH+ ++ + ++SYR+LP++  E+G V+R+E SG LHGL RVR FTQDD
Sbjct: 290 EQEYGIKPMNCVGHIKIYQNDVRSYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFTQDD 349

Query: 391 AHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKG 450
           AH+FC   Q+  + L+I + + S+ K F FE  M ++STRPEK +G +A+W+ A   +K 
Sbjct: 350 AHIFCMPSQIKEQVLEILDFVASLMKIFDFEYEM-EISTRPEKAIGDEAIWEVATKALKE 408

Query: 451 VLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFY 510
            LD      +  +  G+  G GAFYGPK +  + DA+ R WQCGTIQVDFNLP RF   Y
Sbjct: 409 ALD------EQGLKYGIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDFNLPERFALEY 462

Query: 511 VNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQE 570
             S + K  PVM+HRA+ GS ERFIGI+ E+  G  P +++PIQ  +  I+   + YA+ 
Sbjct: 463 TTSENTKERPVMLHRAILGSFERFIGILTEHCAGEFPFFIAPIQVGIVPISEVHLAYAKG 522

Query: 571 IANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
           I   L    +  E   +NE+++ KIR    +K+P+I++ GD+E S R++ +R   +   +
Sbjct: 523 IQRTLLEMGVDSEIYDKNESLSKKIRNAEKQKLPMILVIGDEELSNRAVALRDRRAKEQK 582

Query: 631 KVSLLDAIPILTKESL 646
            +S LD    L KE +
Sbjct: 583 SLS-LDEFMNLIKEKI 597


>gi|161760548|ref|NP_907033.2| threonyl-tRNA synthetase [Wolinella succinogenes DSM 1740]
          Length = 602

 Score =  474 bits (1220), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 242/590 (41%), Positives = 364/590 (61%), Gaps = 21/590 (3%)

Query: 37  KAVAVAINGKVCDLSDPVREG--SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           K + +    ++ DL      G    EI+    P SL +IRHSCAH++A+A++S++PE Q 
Sbjct: 2   KPIGIKYQNEIYDLQTAQLLGIEGEEILFDNSPDSLHIIRHSCAHLLAQAIKSLYPEAQF 61

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            +GP++++GFYYDF  E     ++LA IEKKM+EI    S   +  LS E+A   F   K
Sbjct: 62  FVGPVVQEGFYYDFRVESKIGEEDLAIIEKKMKEIAKNGSDIERYTLSREEAIAKF--AK 119

Query: 155 EAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNR 214
           +  K  ++  IP + ++++YRQGE+ DLCRGPH+ ST ++   FKL K+AGAY  GD   
Sbjct: 120 DDLKQAVISRIP-EGDLSIYRQGEFEDLCRGPHLPST-KLLHAFKLTKLAGAYLGGDEKS 177

Query: 215 PMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGW 273
            ML+RIYG A+  ++ L  YL+ +EE++KRDHRK+  EM LF   ED G+G+  W   G 
Sbjct: 178 EMLTRIYGIAFADKESLNAYLHQMEEAKKRDHRKVGTEMGLFIFDEDVGAGLPIWLPAGA 237

Query: 274 KIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           ++ + L + +    I+ +YE +  P++L   LW+ SGH+ +Y+ NM+  K       D  
Sbjct: 238 RLRRRLEAMLTEAHIRRNYEPVRGPEILKSDLWKISGHYQNYKENMYFTKI------DEV 291

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
            + +KPMNC GH+ V+  G++SYRELP+R  E+G V+R+E SG LHGL+RVR FTQDDAH
Sbjct: 292 EYGIKPMNCVGHIKVYGSGVRSYRELPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDAH 351

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
           +FC  EQ+ +E + I + +  I   FGF   M ++STRPEK +G +A+W+     +K  L
Sbjct: 352 IFCRPEQIKDEVVDIVHFVDKIMSAFGFNYEM-EISTRPEKSIGDEAIWEKGTQALKEAL 410

Query: 453 DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
           +         +  G+  G GAFYGPK +  + DAIGR WQCGT+Q+D NLP RF   Y +
Sbjct: 411 EA------QGLQYGIDEGGGAFYGPKIDIKITDAIGRKWQCGTVQIDMNLPERFELAYTD 464

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIA 572
            ++    PVMIHRA+ GS ERF+ I+ E+F G  P +++P    +  I    +EYA+ + 
Sbjct: 465 ENNTPQRPVMIHRAILGSFERFVAILTEHFGGEFPFFIAPTPVAIVPIGEEQLEYAKHLR 524

Query: 573 NLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
             L+   +  E   +NET+N KIR    +++P+I++ G++E +E+ + IR
Sbjct: 525 LELQKVGVYAEIHDKNETLNKKIRTVEKQRVPMIVVLGEREVNEKKVAIR 574


>gi|86134203|ref|ZP_01052785.1| Threonyl-tRNA synthetase [Polaribacter sp. MED152]
 gi|85821066|gb|EAQ42213.1| Threonyl-tRNA synthetase [Polaribacter sp. MED152]
          Length = 647

 Score =  474 bits (1220), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 254/629 (40%), Positives = 385/629 (61%), Gaps = 19/629 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           IK+T PDGS+K F  ++T  DVA+SIS  LA+  ++ + NG   + + P++ +GS+ + T
Sbjct: 2   IKITLPDGSVKEFEKNSTPFDVAKSISEGLARNIISASFNGTTLETTTPLKTDGSLVLYT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQI 122
             D        HS AH++AEA+ S  P  ++ IGP I++GFYYD D  ++  S  + + I
Sbjct: 62  FNDDEGKKAFWHSSAHVLAEAILSFHPNAKLTIGPAIDNGFYYDLDLGDETISEKDFSAI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EKK  EI      F  + +S   A  L++++   YKVE++E++    ++T      + DL
Sbjct: 122 EKKFLEIARGKHEFKMREVSKADALSLYKAENNPYKVELIENL-TDGDITFCDHSNFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRG H+ +TG +K   K+M VAGAYWRGD     L+R+YG ++  Q+ LT+YL  LEE++
Sbjct: 181 CRGGHIPNTGIIKAI-KIMNVAGAYWRGDEKNNQLTRVYGISFPKQKMLTEYLELLEEAK 239

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           KRDHRKL +E++LF  ++  G+G+  W  KG  + + L ++++  + K  YE + TP + 
Sbjct: 240 KRDHRKLGKELELFTFSQKVGAGLPLWLPKGAALRERLQNFLKAAQKKAGYEMVMTPHIG 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            + L+  SGH++ Y  + F    A  T K    F LKPMNCP H  V+N    SY++LP 
Sbjct: 300 QKELYVTSGHYEKYGEDSFQ---AIKTPKMDEEFLLKPMNCPHHCEVYNFKPYSYKDLPK 356

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R AEFG+VYR E SG LHGL RVRGFTQDDAH+FCT EQ+  E  ++ +L++ ++   GF
Sbjct: 357 RFAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCTPEQLDQEFKEVIDLVLYVFGSLGF 416

Query: 421 EKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           E    ++S R     +K +G    W+ AEN    ++   K+   D +   +  GE AFYG
Sbjct: 417 EDFTAQVSIRDMENLDKYIGDVETWEIAEN---AIISAAKDKGLDYV---IEEGEAAFYG 470

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK ++++KDA+GR WQ GTIQVD+NLP RF+  Y  S ++   PVMIHRA FGS+ERFI 
Sbjct: 471 PKLDFMVKDALGRSWQLGTIQVDYNLPKRFDLTYTGSDNQSHRPVMIHRAPFGSMERFIA 530

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +++E+  GN PLWL+P Q I+  I+    +Y +++   L++  +    D R+E    KIR
Sbjct: 531 VLLEHTGGNFPLWLTPEQVIILPISDKYQKYTEKVLESLENSEIRALVDDRSEKTGRKIR 590

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFG 625
           +  + KIP ++I G+KE  + ++ +R+ G
Sbjct: 591 DAEVSKIPFMVIVGEKEEQDGTVSVRKHG 619


>gi|255507180|ref|ZP_05382819.1| threonyl-tRNA synthetase [Chlamydia trachomatis D(s)2923]
 gi|289525626|emb|CBJ15104.1| threonyl-tRNA synthetase [Chlamydia trachomatis Sweden2]
 gi|296435188|gb|ADH17366.1| threonyl-tRNA synthetase [Chlamydia trachomatis E/150]
 gi|296438907|gb|ADH21060.1| threonyl-tRNA synthetase [Chlamydia trachomatis E/11023]
          Length = 635

 Score =  474 bits (1219), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 250/609 (41%), Positives = 368/609 (60%), Gaps = 21/609 (3%)

Query: 17  FPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIRH 75
            P  A+  D+A  + +S         IN +  DLS  +++G ++  +T +DP+   +  H
Sbjct: 13  LPEGASAMDLANKMKQSHC--FAGALINDQEKDLSTTLQDGDTVLFLTWDDPKGREIFLH 70

Query: 76  SCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSP 135
           + AHI+A+AV  +WP  Q  IGP+I+ GFYYDF      S ++   IE   + I     P
Sbjct: 71  TSAHILAQAVLRLWPSAQPTIGPVIDQGFYYDF-ANLSISEEDFPAIEAMAKTIAEEKFP 129

Query: 136 FLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVK 195
             +Q    ++A   + S+   +K E++  +P +  ++ Y QGE+ DLCRGPH+ ST  VK
Sbjct: 130 ISRQVFPDKEAALAYFSQN-PFKAELIAELPEEVEISAYTQGEFLDLCRGPHLPSTAPVK 188

Query: 196 KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDL 255
            F KL++ + AYW+GD +R  L RIYG ++ T +EL ++L+ LEE++KRDHR L  ++DL
Sbjct: 189 AF-KLLRTSSAYWKGDPSRESLIRIYGVSFPTTKELKEHLHQLEEAKKRDHRVLGTKLDL 247

Query: 256 FHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSY 314
           F      +G+ F+H +G  ++  L+ Y +R   +  Y++I TPQ++++ LW+ SGHW++Y
Sbjct: 248 FSQQTCSAGMPFFHPRGMVVWNALVDYWKRLHQRAGYQQIQTPQLMNRELWEISGHWENY 307

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
           + NM+ +        D   +A+KPMNCPG +  +   L SYRE P+R+AE G V+R+E S
Sbjct: 308 KENMYTLTV------DEEDYAIKPMNCPGCMLYYKTQLHSYREFPLRIAEIGHVHRHELS 361

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK- 433
           G+L GLMRVR F QDDAHVF T EQ+  E L I NL+  +Y  FG E   ++LSTRPE+ 
Sbjct: 362 GALSGLMRVRTFHQDDAHVFLTPEQVEEETLNILNLVSELYGTFGLE-YHLELSTRPEQG 420

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
            +GSD LW+ A   +K  L  +K+     I+ G    EGAFYGPK +  +KDAI R WQC
Sbjct: 421 TIGSDDLWELATEALKRAL--VKSQKPFIISPG----EGAFYGPKIDIHVKDAINRTWQC 474

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI 553
           GTIQ+D  LP RF+  Y N+  EK  P+M+HRA+FGSIERF+GI+IE+FKG  PLWLSP 
Sbjct: 475 GTIQLDMFLPERFDLKYTNAQGEKSTPIMLHRALFGSIERFLGILIEHFKGRFPLWLSPE 534

Query: 554 QAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
              + T+       AQE+A       + +  D  NE+++ KIR     ++  +I  GDKE
Sbjct: 535 HVRIITVADRHEARAQELAKHFSQMGIIVSVDSSNESVSKKIRNAQNMQVNYMITIGDKE 594

Query: 614 ASERSIGIR 622
                + +R
Sbjct: 595 LETHLLAVR 603


>gi|297748711|gb|ADI51257.1| Threonyl-tRNA synthetase [Chlamydia trachomatis D-EC]
 gi|297749591|gb|ADI52269.1| Threonyl-tRNA synthetase [Chlamydia trachomatis D-LC]
          Length = 660

 Score =  474 bits (1219), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 250/609 (41%), Positives = 368/609 (60%), Gaps = 21/609 (3%)

Query: 17  FPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIRH 75
            P  A+  D+A  + +S         IN +  DLS  +++G ++  +T +DP+   +  H
Sbjct: 38  LPEGASAMDLANKMKQSHC--FAGALINDQEKDLSTTLQDGDTVLFLTWDDPKGREIFLH 95

Query: 76  SCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSP 135
           + AHI+A+AV  +WP  Q  IGP+I+ GFYYDF      S ++   IE   + I     P
Sbjct: 96  TSAHILAQAVLRLWPSAQPTIGPVIDQGFYYDF-ANLSISEEDFPAIEAMAKTIAEEKFP 154

Query: 136 FLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVK 195
             +Q    ++A   + S+   +K E++  +P +  ++ Y QGE+ DLCRGPH+ ST  VK
Sbjct: 155 ISRQVFPDKEAALAYFSQN-PFKAELIAELPEEVEISAYTQGEFLDLCRGPHLPSTAPVK 213

Query: 196 KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDL 255
            F KL++ + AYW+GD +R  L RIYG ++ T +EL ++L+ LEE++KRDHR L  ++DL
Sbjct: 214 AF-KLLRTSSAYWKGDPSRESLIRIYGVSFPTTKELKEHLHQLEEAKKRDHRVLGTKLDL 272

Query: 256 FHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSY 314
           F      +G+ F+H +G  ++  L+ Y +R   +  Y++I TPQ++++ LW+ SGHW++Y
Sbjct: 273 FSQQTCSAGMPFFHPRGMVVWNALVDYWKRLHQRAGYQQIQTPQLMNRELWEISGHWENY 332

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
           + NM+ +        D   +A+KPMNCPG +  +   L SYRE P+R+AE G V+R+E S
Sbjct: 333 KENMYTLTV------DEEDYAIKPMNCPGCMLYYKTQLHSYREFPLRIAEIGHVHRHELS 386

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK- 433
           G+L GLMRVR F QDDAHVF T EQ+  E L I NL+  +Y  FG E   ++LSTRPE+ 
Sbjct: 387 GALSGLMRVRTFHQDDAHVFLTPEQVEEETLNILNLVSELYGTFGLE-YHLELSTRPEQG 445

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
            +GSD LW+ A   +K  L  +K+     I+ G    EGAFYGPK +  +KDAI R WQC
Sbjct: 446 TIGSDDLWELATKALKRAL--VKSQKPFIISPG----EGAFYGPKIDIHVKDAINRTWQC 499

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI 553
           GTIQ+D  LP RF+  Y N+  EK  P+M+HRA+FGSIERF+GI+IE+FKG  PLWLSP 
Sbjct: 500 GTIQLDMFLPERFDLKYTNAQGEKSTPIMLHRALFGSIERFLGILIEHFKGRFPLWLSPE 559

Query: 554 QAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
              + T+       AQE+A       + +  D  NE+++ KIR     ++  +I  GDKE
Sbjct: 560 HVRIITVADRHEARAQELAKHFSQMGIIVSVDSSNESVSKKIRNAQNMQVNYMITIGDKE 619

Query: 614 ASERSIGIR 622
                + +R
Sbjct: 620 LETHLLAVR 628


>gi|159030629|emb|CAO88297.1| thrS [Microcystis aeruginosa PCC 7806]
          Length = 599

 Score =  474 bits (1219), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 242/561 (43%), Positives = 350/561 (62%), Gaps = 16/561 (2%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           L  IRH+ +H+MA AVQ ++P+ QV IGP  E GFYYDFD  +PF+  +L  I+K+M +I
Sbjct: 18  LKRIRHTTSHVMAMAVQKLFPQAQVTIGPWTETGFYYDFDVPEPFTDKDLKDIKKEMVKI 77

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE-WFDLCRGPHV 188
           I +  P +++ +S E+A +  ++  E YK+EIL  I  +E +TLY  G+ W+DLC GPH+
Sbjct: 78  INKKLPVIREQVSREEAEKRIKAINEPYKLEILAGI--QEPITLYHLGDAWWDLCAGPHL 135

Query: 189 RSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHR 247
            +T ++  K  +L  VAGAYWRGD N+  L RIYGTAW   Q+L +Y    EE+ KRDHR
Sbjct: 136 DNTSELDPKAIELETVAGAYWRGDENKAQLQRIYGTAWENPQQLAEYKRRKEEALKRDHR 195

Query: 248 KLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLW 305
           KL +E+ LF  ++  G G+  W  KG  I   L  ++++ ++K  Y  + TP +    L+
Sbjct: 196 KLGKELGLFIFSDSVGPGLPLWTPKGTLIRSLLEDFLKKEQLKRGYLPVVTPHIARVDLF 255

Query: 306 QQSGHWDSYRANMFAVKCADDTIKDLRT-FALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           + SGHW  Y+ +MF +   D+        F LKPMNCP H+ ++   L+SYRELP+RLAE
Sbjct: 256 KISGHWQKYKEDMFPMMADDEESASKEIGFVLKPMNCPFHIQIYKSDLRSYRELPMRLAE 315

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FG+VYR E SG L GL RVRGFT DD+H+F T EQ+  E L + +LI++++K    +   
Sbjct: 316 FGTVYRYEQSGELGGLTRVRGFTVDDSHLFVTPEQLDKEFLSVVDLILTVFKSLQLKNFK 375

Query: 425 VKLSTR-PE--KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            +LS R PE  K +GSD  W+ A++ ++  + T+     D        GE AFYGPK ++
Sbjct: 376 ARLSFRDPESDKYIGSDEAWEKAQSAIRKAVQTL---GMDYFEAP---GEAAFYGPKLDF 429

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
           I +DA+ R+WQ GT+QVD+NLP RF   YV     +  PVMIHRA FGS+ER IGI+IE 
Sbjct: 430 IFQDALEREWQLGTVQVDYNLPERFELEYVAEDGNRKRPVMIHRAPFGSLERLIGILIEE 489

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G+ PLWL+P+Q  +  ++ S ++YA+E+   ++   +  ETD   E +   IR     
Sbjct: 490 YAGDFPLWLAPVQIRLLPVSDSQLDYAKEVTVKMQLLGIRAETDTSGERLGKMIRNAETA 549

Query: 602 KIPIIIICGDKEASERSIGIR 622
           KIP++ + G KE    S+ IR
Sbjct: 550 KIPVMAVVGAKEMESNSLSIR 570


>gi|162447220|ref|YP_001620352.1| threonyl-tRNA synthetase [Acholeplasma laidlawii PG-8A]
 gi|189083597|sp|A9NF46|SYT_ACHLI RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|161985327|gb|ABX80976.1| threonyl-tRNA synthetase [Acholeplasma laidlawii PG-8A]
          Length = 642

 Score =  473 bits (1218), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 252/655 (38%), Positives = 396/655 (60%), Gaps = 24/655 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           IK+TFPDG+IK++    T  +VAE IS SLAKK VA   N  + ++S  +  +G ++++T
Sbjct: 2   IKVTFPDGNIKSYKKGITVLEVAEDISISLAKKIVAAKFNEDLVEISRKLEHDGKLQLLT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQI 122
           P++  S  V+ HS AH+MA+A++ ++P+    +GP IE+G+YYD D K+  F+  +L ++
Sbjct: 62  PKEELSFHVLNHSAAHLMAQAIRKLYPDALFGVGPAIEEGYYYDVDFKDSVFTDADLEEV 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK M+++   +    +  +S+++AR++F  K + YK+E++E +   + +++YRQGE+ DL
Sbjct: 122 EKMMKKLSEENHLIERIEVSYDEARDIF--KNDPYKLELIE-VYKDDQLSVYRQGEFIDL 178

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRG HV ST  +K F KL+ +AGAYWRGD+    L R+YG A+  + EL ++L  LEE +
Sbjct: 179 CRGGHVPSTKYIKHF-KLLSIAGAYWRGDAKNRQLVRVYGIAYFEKAELDKHLVMLEERK 237

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVL 300
            RDHRK+ +++D+F  +++ GSG+ FW  KG  I + +  Y+  K ++  Y  + TP + 
Sbjct: 238 LRDHRKIGKDLDIFMTSQEVGSGLPFWLPKGATIRRIIERYITDKELELGYLHVYTPIMA 297

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +   ++QSGHWD Y  NM+        + D     L+PMNCP H+ ++   + SYRELP+
Sbjct: 298 NVEFYKQSGHWDHYHENMYPPM----DLGDGEMLVLRPMNCPHHMMIYKKDIHSYRELPI 353

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R AE G ++R E SG+L GL RVR  T +DAH+F   +Q+  E +++ +LII +YKDF  
Sbjct: 354 RFAELGMMHRYEKSGALSGLQRVREMTLNDAHIFVRPDQIKEEFMRVVHLIIEVYKDFKI 413

Query: 421 EKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
                +LS R     EK    D +W  AE+ +K V+D +K   ++ I      GE AFYG
Sbjct: 414 TDYSFRLSYRDPENKEKYFDDDQMWQRAESELKNVMDEMKLPYKEAI------GEAAFYG 467

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH-PVMIHRAVFGSIERFI 535
           PK +  ++ A+G +    T+Q+DF LP RF+  YV    +  H PV+IHR V  ++ERF+
Sbjct: 468 PKLDIQVRTAMGMEETLSTVQLDFLLPERFDLTYVGEDGKNNHRPVVIHRGVVSTMERFV 527

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
             +IE +KG+ PLWL+P+Q  +  +      +Y   +   LK     +E+DFRNE + YK
Sbjct: 528 AYLIEEYKGSFPLWLAPVQLKLIPVNLDLHKDYVMNLHEQLKKLGFRVESDFRNEKLGYK 587

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPD 649
           IRE    KIP  ++ GD E +  SI  R +GS     +S+   I +L +  +  D
Sbjct: 588 IREAQTLKIPYQLVVGDNEMNTHSITYRPYGSEKQINISIDGFIKLLNERMINKD 642


>gi|15605310|ref|NP_220096.1| threonyl-tRNA synthetase [Chlamydia trachomatis D/UW-3/CX]
 gi|76789318|ref|YP_328404.1| threonyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13]
 gi|237803010|ref|YP_002888204.1| threonyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT]
 gi|237804932|ref|YP_002889086.1| threonyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|255311401|ref|ZP_05353971.1| threonyl-tRNA synthetase [Chlamydia trachomatis 6276]
 gi|255317702|ref|ZP_05358948.1| threonyl-tRNA synthetase [Chlamydia trachomatis 6276s]
 gi|255348963|ref|ZP_05380970.1| threonyl-tRNA synthetase [Chlamydia trachomatis 70]
 gi|255503502|ref|ZP_05381892.1| threonyl-tRNA synthetase [Chlamydia trachomatis 70s]
 gi|7388284|sp|O84585|SYT_CHLTR RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|123731247|sp|Q3KLB6|SYT_CHLTA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|6578108|gb|AAC68183.2| Threonyl tRNA Synthetase [Chlamydia trachomatis D/UW-3/CX]
 gi|76167848|gb|AAX50856.1| threonyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13]
 gi|231273232|emb|CAX10145.1| threonyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|231274244|emb|CAX11038.1| threonyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT]
 gi|296436115|gb|ADH18289.1| threonyl-tRNA synthetase [Chlamydia trachomatis G/9768]
 gi|296437044|gb|ADH19214.1| threonyl-tRNA synthetase [Chlamydia trachomatis G/11222]
 gi|296437975|gb|ADH20136.1| threonyl-tRNA synthetase [Chlamydia trachomatis G/11074]
 gi|297140477|gb|ADH97235.1| threonyl-tRNA synthetase [Chlamydia trachomatis G/9301]
          Length = 635

 Score =  473 bits (1218), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 250/609 (41%), Positives = 368/609 (60%), Gaps = 21/609 (3%)

Query: 17  FPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIRH 75
            P  A+  D+A  + +S         IN +  DLS  +++G ++  +T +DP+   +  H
Sbjct: 13  LPEGASAMDLANKMKQSHC--FAGALINDQEKDLSTTLQDGDTVLFLTWDDPKGREIFLH 70

Query: 76  SCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSP 135
           + AHI+A+AV  +WP  Q  IGP+I+ GFYYDF      S ++   IE   + I     P
Sbjct: 71  TSAHILAQAVLRLWPSAQPTIGPVIDQGFYYDF-ANLSISEEDFPAIEAMAKTIAEEKFP 129

Query: 136 FLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVK 195
             +Q    ++A   + S+   +K E++  +P +  ++ Y QGE+ DLCRGPH+ ST  VK
Sbjct: 130 ISRQVFPDKEAALAYFSQN-PFKAELIAELPEEVEISAYTQGEFLDLCRGPHLPSTAPVK 188

Query: 196 KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDL 255
            F KL++ + AYW+GD +R  L RIYG ++ T +EL ++L+ LEE++KRDHR L  ++DL
Sbjct: 189 AF-KLLRTSSAYWKGDPSRESLIRIYGVSFPTTKELKEHLHQLEEAKKRDHRVLGTKLDL 247

Query: 256 FHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSY 314
           F      +G+ F+H +G  ++  L+ Y +R   +  Y++I TPQ++++ LW+ SGHW++Y
Sbjct: 248 FSQQTCSAGMPFFHPRGMVVWNALVDYWKRLHQRAGYQQIQTPQLMNRELWEISGHWENY 307

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
           + NM+ +        D   +A+KPMNCPG +  +   L SYRE P+R+AE G V+R+E S
Sbjct: 308 KENMYTLTV------DEEDYAIKPMNCPGCMLYYKTQLHSYREFPLRIAEIGHVHRHELS 361

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK- 433
           G+L GLMRVR F QDDAHVF T EQ+  E L I NL+  +Y  FG E   ++LSTRPE+ 
Sbjct: 362 GALSGLMRVRTFHQDDAHVFLTPEQVEEETLNILNLVSELYGTFGLE-YHLELSTRPEQG 420

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
            +GSD LW+ A   +K  L  +K+     I+ G    EGAFYGPK +  +KDAI R WQC
Sbjct: 421 TIGSDDLWELATKALKRAL--VKSQKPFIISPG----EGAFYGPKIDIHVKDAINRTWQC 474

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI 553
           GTIQ+D  LP RF+  Y N+  EK  P+M+HRA+FGSIERF+GI+IE+FKG  PLWLSP 
Sbjct: 475 GTIQLDMFLPERFDLKYTNAQGEKSTPIMLHRALFGSIERFLGILIEHFKGRFPLWLSPE 534

Query: 554 QAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
              + T+       AQE+A       + +  D  NE+++ KIR     ++  +I  GDKE
Sbjct: 535 HVRIITVADRHEARAQELAKHFSQMGIIVSVDSSNESVSKKIRNAQNMQVNYMITIGDKE 594

Query: 614 ASERSIGIR 622
                + +R
Sbjct: 595 LETHLLAVR 603


>gi|254819890|ref|ZP_05224891.1| threonyl-tRNA synthetase [Mycobacterium intracellulare ATCC 13950]
          Length = 691

 Score =  473 bits (1218), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 258/653 (39%), Positives = 368/653 (56%), Gaps = 45/653 (6%)

Query: 11  DGSIKNFPVHATGSDVAESISRSL------AKKAVAVA--INGKVCDLS-DPVREGSIEI 61
           DGS    P+       A +  R        A   V V     GK+ DLS  P  +  +  
Sbjct: 12  DGSDPQAPIRVPAGTTAAAAVRDAGLPGRGAPDGVVVVRDAEGKLRDLSWAPAADAEVIP 71

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +        +VIRHS AH++A+AVQ ++P+ ++ IGP I DGFYYDFD  +PF+ ++LA 
Sbjct: 72  VAANTDDGRSVIRHSAAHVLAQAVQELFPQAKLGIGPPITDGFYYDFDVPEPFTPEDLAA 131

Query: 122 IEKKMQEIIARDSPFLKQ-YLSHEKARELFESKKEAYKVEILESIPAKENV--------T 172
           +EK+M++I+     F ++ Y S ++AR   E   E YK+E+++      +V        T
Sbjct: 132 LEKRMRQIVKEGQLFERRVYESKDQARA--ELAGEPYKLELVDDKSGDPSVMEVGGDELT 189

Query: 173 LY-------RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAW 225
            Y       R+  W DLCRGPH+ +T  +  F KL + + AYWRGD N   L RIYGTAW
Sbjct: 190 AYDNLNPRTRERVWGDLCRGPHIPTTRHIPAF-KLTRSSAAYWRGDQNNASLQRIYGTAW 248

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR 284
            +Q+ L ++L  +EE+++RDHRKL  E+DLF   ++ GSG+  +H KG  + + L  Y R
Sbjct: 249 ESQEALERHLTLIEEAQRRDHRKLGTELDLFSFPDEIGSGLAVFHPKGGIVRRELEEYSR 308

Query: 285 RK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT-------FAL 336
           RK I   YE +NTP +    L+  SGH D Y   M+     D    D  T       + L
Sbjct: 309 RKHIAAGYEFVNTPHITKADLFHTSGHLDWYAEGMYPPMHLDAEYDDDGTVRKPGQDYYL 368

Query: 337 KPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT 396
           KPMNCP H  +F    +SYRELP+RL EFG+VYR E SG +HGL R RGFT DDAH+FC 
Sbjct: 369 KPMNCPMHTLIFRSRGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTMDDAHIFCA 428

Query: 397 KEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR-PEKRVGSDALWDDAENIMKGVLDTI 455
           +EQ+  E   +   I+ +  D+G E   ++LST+ PEK VGSDA+W   E   K + D  
Sbjct: 429 REQLHAELASLLRFILELLGDYGLEDFYLELSTKDPEKFVGSDAMW---EESTKALADVA 485

Query: 456 KNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS 515
             S    +      G  AFYGPK     +DA+GR WQ  TIQVDFN P RF   Y  +  
Sbjct: 486 AESGLQLVPD---PGGAAFYGPKISVQARDALGRSWQMSTIQVDFNFPERFELEYTAADG 542

Query: 516 EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLL 575
            +  PVMIHRA+FGSIERF GI+ E++ G  P WL+P+Q +   +    V+Y  ++A  L
Sbjct: 543 SRQRPVMIHRALFGSIERFFGILTEHYAGAFPAWLAPVQVVGIPVADDHVDYLNDVAAQL 602

Query: 576 KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
           +SH + +E D  ++ +  KI  H+ +++P +++ GD++ +  ++   RFG  T
Sbjct: 603 RSHGVRVEVDASDDRMAKKIVNHTNQRVPFMLLAGDRDVAAGAVSF-RFGDRT 654


>gi|237752912|ref|ZP_04583392.1| threonyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430]
 gi|229375179|gb|EEO25270.1| threonyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430]
          Length = 605

 Score =  473 bits (1218), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 240/581 (41%), Positives = 364/581 (62%), Gaps = 20/581 (3%)

Query: 69  SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQE 128
           +L+++RH+CAH+MAEA+++++PE Q  +GP++E+GFYYDF      S ++L++IE KM+E
Sbjct: 37  ALSIMRHTCAHLMAEALKALYPEAQFFVGPVVEEGFYYDFRVNHKISEEDLSKIEAKMKE 96

Query: 129 IIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWFDLCRGPH 187
           I  +     K YL+ E+A + F++  +  K  ++  IP  +  +++Y QGE+ DLCRGPH
Sbjct: 97  IAKKGEKITKYYLTREEAIQKFQN--DDLKQAVISRIPLGDGRLSIYAQGEFEDLCRGPH 154

Query: 188 VRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHR 247
           +  T ++   FKL KVAGAY  GD    ML+RIYG A+  ++ LTQYL+ LEE++KRDHR
Sbjct: 155 L-PTLKLLNAFKLTKVAGAYLGGDEKAEMLTRIYGIAFADKESLTQYLHQLEEAKKRDHR 213

Query: 248 KLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLW 305
           K+  EM+LF   E+ G+G+  W  KG ++ + L + + +  I+  YE +  P++L   +W
Sbjct: 214 KVGVEMELFTFDEEVGAGLPIWLPKGARLRRNLENLLTQALIERGYEPVRGPEILKSAVW 273

Query: 306 QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEF 365
           + SGH+ +Y  NM+       T  D   + +KPMNC GH+ V+ + L SYRELP+R  E+
Sbjct: 274 KTSGHYANYGENMYF------TTIDEVEYGIKPMNCVGHIKVYQNSLHSYRELPLRFYEY 327

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
           G V+R+E SG LHGL+RVR FTQDDAH+FC   Q+ +E   I +    I   FGF   M 
Sbjct: 328 GVVHRHEKSGVLHGLLRVREFTQDDAHIFCRPSQIASEVESIIDFTQKIMNAFGFSYEM- 386

Query: 426 KLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKD 485
           ++ST+PEK +GS+ +W++A   +KG L+         I   +  G GAFYGPK +  + D
Sbjct: 387 EISTKPEKSIGSEEVWEEATQALKGALERCG------IAYKIDEGGGAFYGPKIDIKITD 440

Query: 486 AIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           AIGR WQCGT+Q+D NLP RF   Y + ++    PVMIHRA+ GS ERF+ I+ E+F G 
Sbjct: 441 AIGRKWQCGTVQIDMNLPERFALTYTDENNSTQQPVMIHRAILGSFERFVAILTEHFGGE 500

Query: 546 LPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPI 605
            P +++P Q I+  I+ +   YA+E+ N L    +  E + +NET+N +IR    +++P+
Sbjct: 501 FPFFVAPTQVIIIPISEAQYNYAKELHNALLKVGVYAEIENKNETLNKRIRNAEKQRVPM 560

Query: 606 IIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           I + G KE  ER + +R         +S  ++   LTKE +
Sbjct: 561 IAVLGAKEKEERLVAVRDRRLKEQSNMS-FESFITLTKEKM 600


>gi|291295577|ref|YP_003506975.1| threonyl-tRNA synthetase [Meiothermus ruber DSM 1279]
 gi|290470536|gb|ADD27955.1| threonyl-tRNA synthetase [Meiothermus ruber DSM 1279]
          Length = 652

 Score =  473 bits (1218), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 249/634 (39%), Positives = 383/634 (60%), Gaps = 31/634 (4%)

Query: 8   TFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPED 66
             PDG        AT +D A++I   LAK A+   +NG++ DL  P+     + I+T +D
Sbjct: 4   VLPDGRNLELKPGATAADAAQAIGPGLAKAAIGAIVNGELYDLLKPLPPHAELRILTEKD 63

Query: 67  PRSLAVIRHSCAHIMAEAVQSIWPE-------VQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           P    + RH+ AH+MA+AV+ ++ E       V++AIGP+IE+GFYYD D  +P   ++L
Sbjct: 64  PEYAQLFRHTLAHVMAQAVRELYTERGYRPEEVKLAIGPVIENGFYYDMDAPEPIREEDL 123

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE- 178
             IE+KM+ I+A + P  +  L  E+A + + +  + YK E+++ +P  E ++ Y QG+ 
Sbjct: 124 PIIEEKMRRIVAANLPLKRFVLPREEALKRY-AGIDPYKTELIQDLPESEELSFYAQGDD 182

Query: 179 ---WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
              + DLCRGPHV STG++   FKL  +AGAYWRGDS+RPML RIYG A+ T++EL  YL
Sbjct: 183 TYGFTDLCRGPHVPSTGRIPPHFKLTGIAGAYWRGDSSRPMLQRIYGVAFRTKEELEHYL 242

Query: 236 YFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEE 293
           +  EE+++RDHR+L + ++LF I+E+ G G+  W  +G  I + +  YM +K ++  Y  
Sbjct: 243 WQQEEAKRRDHRRLGQALELFTISEEVGKGLPLWLPRGAFIRRQMEDYMYQKEQEHGYHY 302

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           + TP + +  L+  SGH   Y+ +M+A    +        + LKPMNCP H  ++    K
Sbjct: 303 VYTPHIANARLYYTSGHLPYYKDDMYAPIEIEG-----EEYYLKPMNCPHHHMIYKARPK 357

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYR+LP+RLAEFG+VYR E SG+L GL R RGFTQ+DAH++C++ Q+  E +++  L   
Sbjct: 358 SYRDLPLRLAEFGTVYRFELSGTLSGLTRARGFTQNDAHIYCSRAQVTEEFIRVIQLFDE 417

Query: 414 IYKDFGFEKIMVKLS-----TRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
           +YKDFG      +LS       PEK    +  W D+   ++  L+       + I     
Sbjct: 418 VYKDFGISDYWFRLSLPDFENNPEKFGEENDNWRDSIKAIRAALEETGAKYVEGI----- 472

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
            GE  FYGPK +  ++  +G++    T Q+DF +P RF   + N   EK  PV+IHRA+ 
Sbjct: 473 -GEATFYGPKLDVQIRSVLGKEETIATNQLDFIVPERFGLEFTNEKGEKETPVVIHRAIM 531

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRN 588
           GS +RF    +E+  G+ PLWLSPIQA++  I    +EYAQ++A  ++ + L +E D R+
Sbjct: 532 GSFDRFFAFYLEHTAGDFPLWLSPIQAVIVPIADRHLEYAQKVAAEMRKNRLRVEIDDRS 591

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           E +N KIR+  ++KIP+I++ GDKEA   ++ +R
Sbjct: 592 ERMNAKIRDAELQKIPLILVVGDKEAEAGTVNVR 625


>gi|307326749|ref|ZP_07605941.1| threonyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113]
 gi|306887512|gb|EFN18506.1| threonyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113]
          Length = 659

 Score =  473 bits (1217), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 262/662 (39%), Positives = 379/662 (57%), Gaps = 43/662 (6%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLS-DPVREGSIEI 61
           SD+++     S +   V ATG+  A+  S    +  VAV + G++ DL+  P     IE 
Sbjct: 2   SDVRVIIQRDSEREERVVATGTTTADVFSGD--RSIVAVRVGGQLKDLAYQPAEGDEIEP 59

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +       L ++RHS AH+MA+AVQ ++P+ ++ IGP I+DGFYYDFD E PF  D+L +
Sbjct: 60  VEITSKDGLDILRHSTAHVMAQAVQELFPDAKLGIGPPIKDGFYYDFDVETPFHPDDLKR 119

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL--------------ESIPA 167
           IEKKMQEI  R   F ++ ++ ++ARE  E   E YK+E++                + A
Sbjct: 120 IEKKMQEIQKRGQRFSRRAVTDDEARE--ELSAEPYKLELIGLKGSAADAAEGASAEVGA 177

Query: 168 KENVTLY-----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRI 220
            E +T+Y     + GE  W DLCRGPH+ +T  +  F KLM+ A AYWRG    P L RI
Sbjct: 178 GE-LTIYDNLDAKSGELCWKDLCRGPHLPTTRNIPAF-KLMRSAAAYWRGSEKNPQLQRI 235

Query: 221 YGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTL 279
           YGTAW T+ EL  YL FL E+EKRDHRKL  E+DLF   ++ GSG+  +H KG  I + +
Sbjct: 236 YGTAWPTKDELKAYLDFLAEAEKRDHRKLGAELDLFSFPDELGSGLAVFHPKGGVIRKEM 295

Query: 280 ISYMRRKIKDD-YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKP 338
             Y R++  +  YE +NTP +    L++ SGH   Y   MF     +      + + LK 
Sbjct: 296 EEYSRKRHDESGYEFVNTPHITKARLFETSGHLPHYMDGMFPPMEFEG-----QDYYLKA 350

Query: 339 MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE 398
           MNCP H  +F    +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDD+H++CTKE
Sbjct: 351 MNCPMHNLIFRARGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDSHIYCTKE 410

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLSTR--PEKRVGSDALWDDAENIMKGVLDTIK 456
           QM +E   +   ++ + +D+G     ++LSTR   +K +G    W++A   ++      K
Sbjct: 411 QMADELDNLLTFVLDLLRDYGLNDFYLELSTRDDSDKFIGGPEQWEEATEELR------K 464

Query: 457 NSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE 516
            + +  +   +  G  AFYGPK     +DAIGR WQ  TIQVDFN P RF   Y  +   
Sbjct: 465 AAEKQGLELVMDPGGAAFYGPKISVQARDAIGRTWQMSTIQVDFNQPERFELEYTAADGS 524

Query: 517 KCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLK 576
           +  PVMIHRA+FGSIERF  +++E++ G  P WL+P+QA+   I    V Y +E A   K
Sbjct: 525 RQQPVMIHRALFGSIERFFAVLLEHYAGAFPAWLAPVQAVGIPIGDGHVPYLEEFAAQAK 584

Query: 577 SHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
           +  L +E D  ++ +  KIR     KIP ++I GD++ +  ++  R    +    + + +
Sbjct: 585 AKGLRMEVDSSSDRMQKKIRNAQKSKIPFMVIVGDEDVTNNAVSFRYRDGSQKNGIPIDE 644

Query: 637 AI 638
           A+
Sbjct: 645 AL 646


>gi|149195433|ref|ZP_01872516.1| threonyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
 gi|149134438|gb|EDM22931.1| threonyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
          Length = 613

 Score =  473 bits (1217), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 248/607 (40%), Positives = 380/607 (62%), Gaps = 19/607 (3%)

Query: 42  AINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE 101
            I  K  D+SD     +  I   +   +L +IRHS AH+MA+A++ ++P+ +  +GP IE
Sbjct: 19  TIEAKNIDISD-----AKPIYFDDSEDALEIIRHSAAHLMAQAIKELYPDAKFYVGPTIE 73

Query: 102 DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEI 161
           +GFYYD     P +  +L  IEKKM++   +     +  +S ++A E F  K +  K E+
Sbjct: 74  NGFYYDLKTSTPITDKDLKNIEKKMKQFAKKKIDITRYEISKDEAIEKF--KDDELKQEV 131

Query: 162 LESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIY 221
           L+ IP+ + V++Y+QG++ DLCRGPH+ +T  +    KL KVAGAY  GDSN+ ML+R+Y
Sbjct: 132 LKMIPS-DVVSIYKQGDFEDLCRGPHLPNTKYLHNV-KLQKVAGAYLGGDSNKEMLTRVY 189

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLI 280
           GTA+ T++ L +YL  LEE+ KRDHRKL +E++L+   E+   G+  W  +G  +   L 
Sbjct: 190 GTAFATKEALQEYLKRLEEALKRDHRKLGKELELWLFDEEVAPGMPIWLPRGAMLRANLE 249

Query: 281 SYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCA-DDTIKDLRTFALKP 338
             +    I+ +YE +  P++L   +W+ SGH+ +Y+ NM+  + A DD  K    + +KP
Sbjct: 250 KLLFSAHIQREYEPVRGPEILRSEMWKISGHYYNYKENMYFTEIAHDDNQKQAEEYGIKP 309

Query: 339 MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE 398
           MNC  HV +F H ++SY+ELP+R  EFG+V+R+E SG LHGL+RVR FTQDDAH+FC  E
Sbjct: 310 MNCLSHVKIFGHKVRSYKELPLRFFEFGTVHRHEKSGVLHGLLRVREFTQDDAHIFCRPE 369

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNS 458
           Q+  E +K+ + + SI + FGF K  +++STRPEK +GSD +W+ A   +K  L+ +   
Sbjct: 370 QIEEEVIKVLDFVDSIMQRFGF-KYEMEISTRPEKSIGSDEIWEKATEALKNALNKLNRE 428

Query: 459 SQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC 518
                  G+  G GAFYGPK +  + DAIGR WQCGTIQVDFNLP RF+  Y++ ++E+ 
Sbjct: 429 ------YGIDEGGGAFYGPKIDIKITDAIGRKWQCGTIQVDFNLPERFDISYIDENNERK 482

Query: 519 HPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSH 578
            PVMIHRA+ GS ERFI I+ E++ G  P +++PI+AI   I+ + ++YA+EI   L   
Sbjct: 483 RPVMIHRAIIGSFERFIAILTEHYAGEFPTFIAPIKAIFVPISENHIDYAKEIQKELLKD 542

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
            L  E    N+++N +IR    +K+  ++I GD+E  + ++ IR     T  K+   + +
Sbjct: 543 DLKTEIYASNDSLNKRIRNAEKQKVAYVVIIGDEEVKDGTVAIRDRRKRTQYKMKKGEFV 602

Query: 639 PILTKES 645
            ++ K S
Sbjct: 603 EMIKKLS 609


>gi|72162507|ref|YP_290164.1| threonyl-tRNA synthetase [Thermobifida fusca YX]
 gi|123747139|sp|Q47N28|SYT_THEFY RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|71916239|gb|AAZ56141.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Thermobifida
           fusca YX]
          Length = 659

 Score =  473 bits (1217), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 256/653 (39%), Positives = 378/653 (57%), Gaps = 47/653 (7%)

Query: 19  VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI-EIITPEDPRSLAVIRHSC 77
           V A G+   +++     +  +A  +NG+  DL+  + +G + E I  +     A++RHSC
Sbjct: 17  VVAAGTTAGQALEAD-GRTVIAALVNGEPRDLTHELADGDVVEEIRIDSEEGRAILRHSC 75

Query: 78  AHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFL 137
           AH++A+AVQ ++PE ++ IGP IE+GFYYDFD  +PF+ D+L +IEK+MQEII +   F 
Sbjct: 76  AHVLAQAVQELFPEAKLGIGPPIENGFYYDFDVAEPFTPDDLKRIEKRMQEIIKQGQRFS 135

Query: 138 KQYLSHEKARELFESKKEAYKVEILE-------------SIPAKENVTLY-----RQGE- 178
           ++ ++ E AR   E   E YK+E++E                    +T+Y     R GE 
Sbjct: 136 RRAVTDEDARA--ELADEPYKLELIELKGGAAEAAEGAGVEVGAGQLTIYDNLHPRTGEV 193

Query: 179 -WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
            W DLCRGPH+  T  +  F KLM+ A AYWRG    P L RIYGTAW T+  L  YL  
Sbjct: 194 CWKDLCRGPHLPDTRAIPAF-KLMRTAAAYWRGSEKNPQLQRIYGTAWETKDALKSYLTM 252

Query: 238 LEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
           LEE+ KRDHRKL  E+DLF   ++ GSG+  +H KG  + + +  Y RR+ ++  Y+ +N
Sbjct: 253 LEEAAKRDHRKLGVELDLFSFPDELGSGLAVFHPKGGVVRKVMEEYSRRRHEEAGYQFVN 312

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFA---VKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           TP +    L++ SGH  +Y   MF     + AD        + LK MNCP H  ++    
Sbjct: 313 TPHISKAGLFETSGHLPNYADAMFPPIQFEGAD--------YYLKAMNCPMHNLIYRSRG 364

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
           +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDDAH++CTKEQM +E  ++   ++
Sbjct: 365 RSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYCTKEQMPDELDRLLTFVL 424

Query: 413 SIYKDFGFEKIMVKLSTRPE--KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
            + +D+G     ++LSTR +  K +G    W++A  I++      + + +  +   +  G
Sbjct: 425 DLLRDYGLSDFYLELSTRDDSPKFIGEPQEWEEATEILR------QAAQKQNLELVMDAG 478

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
             A+YGPK     KDAIGR WQ  TIQVDF  P RF   Y  +   +  PVMIHRA+FGS
Sbjct: 479 GAAYYGPKISVQAKDAIGRTWQMSTIQVDFQQPKRFELEYQAADGSRQRPVMIHRALFGS 538

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
           IERF  +++E++ G  P WL+P+Q +   I S  V Y +++A  L+ H + +E D  ++ 
Sbjct: 539 IERFFAVLLEHYAGAFPAWLAPVQVVGIPIASEHVPYLEDVARRLREHGVRVEVDASDDR 598

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI-PILT 642
           +  KIR    +KIP +++ GD + S+ ++  R    +    V +  AI  ILT
Sbjct: 599 MQKKIRNAQKQKIPFMLLAGDNDVSKGAVSFRYRDGSQNNGVPIDKAIEEILT 651


>gi|297155818|gb|ADI05530.1| threonyl-tRNA synthetase [Streptomyces bingchenggensis BCW-1]
          Length = 659

 Score =  473 bits (1217), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 262/662 (39%), Positives = 384/662 (58%), Gaps = 43/662 (6%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEI 61
           SD++++    S +   V  TG+  A  +     +  VA  + G++ DL+  + EG  +E 
Sbjct: 2   SDVRVSIQRDSEREERVVTTGTTAA--VLFDGDRSIVAARVAGQLKDLAYELAEGDEVEP 59

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +       L ++RHS AH+MA+AVQ ++PE ++ IGP I+DGFYYDFD E PF  D+L +
Sbjct: 60  VEITSQDGLDILRHSTAHVMAQAVQELFPEAKLGIGPPIKDGFYYDFDVETPFHPDDLKR 119

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL--------------ESIPA 167
           IEKKMQEII R   F ++ ++ E ARE  E   E YK+E++                + A
Sbjct: 120 IEKKMQEIIKRGQRFSRRPVTDEAARE--ELSAEPYKLELIGLKGSAADAAEGASAEVGA 177

Query: 168 KENVTLY-----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRI 220
            E +T+Y     + GE  W DLCRGPH+ +T  +  F KLM+ A AYWRG    P L RI
Sbjct: 178 GE-LTIYDNLDAKSGELCWRDLCRGPHLPTTRNIPAF-KLMRSAAAYWRGSEKNPQLQRI 235

Query: 221 YGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTL 279
           YGTAW T+ EL  YL FL E+EKRDHRKL  E+DLF   ++ GSG+  +H KG  I + +
Sbjct: 236 YGTAWPTKDELKAYLDFLVEAEKRDHRKLGSELDLFSFPDELGSGLAVFHPKGGIIRREM 295

Query: 280 ISYMRRKIKDD-YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKP 338
            +Y R++ ++  YE +NTP +    L++ SGH   Y   MF     +      + + LK 
Sbjct: 296 EAYSRKRHEESGYEFVNTPHITKAKLFETSGHLPHYMEGMFPPMEFEG-----QDYYLKA 350

Query: 339 MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE 398
           MNCP H  +F    +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDD+H++CT+E
Sbjct: 351 MNCPMHNLIFRARGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRTRGFTQDDSHIYCTRE 410

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLSTR--PEKRVGSDALWDDAENIMKGVLDTIK 456
           Q  +E   +   ++ + +D+G     ++LSTR   +K +GSD  W +A ++++      +
Sbjct: 411 QAPDELDSLLTFVLDLLRDYGLNDFYLELSTRDDSDKFIGSDEQWAEATDMLR------Q 464

Query: 457 NSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE 516
            + +  +   +  G  A+YGPK     KDAIGR WQ  TIQVDFN P+RF   Y  +   
Sbjct: 465 AAEKQGLELVMDPGGAAYYGPKISVQAKDAIGRTWQMSTIQVDFNQPARFELEYTAADGS 524

Query: 517 KCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLK 576
           +  P+M+HRA+FGSIERF  +++E++ G  P+WL+P+QA+   I  S V Y +E A   K
Sbjct: 525 RQQPIMLHRALFGSIERFFAVLLEHYAGAFPVWLAPVQAVGIPIGDSHVPYLEEFAAEAK 584

Query: 577 SHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
           +  L +E D  ++ +  KIR     KIP +II GD + +  ++  R    +    +   +
Sbjct: 585 AKGLRVEVDSSSDRMQKKIRNAQRAKIPFMIIAGDDDMAAGAVSFRYRDGSQKNGIPRYE 644

Query: 637 AI 638
           AI
Sbjct: 645 AI 646


>gi|315639344|ref|ZP_07894506.1| threonine--tRNA ligase [Campylobacter upsaliensis JV21]
 gi|315480670|gb|EFU71312.1| threonine--tRNA ligase [Campylobacter upsaliensis JV21]
          Length = 602

 Score =  473 bits (1217), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 248/616 (40%), Positives = 375/616 (60%), Gaps = 22/616 (3%)

Query: 34  LAKKAVAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQ 93
           + K+ +A   NG + D          ++       +L V+RHSCAH+MA+A+++++PE +
Sbjct: 1   MEKEIIAYQNNGVLIDTQSATNLDFEKVYFDNSKEALEVLRHSCAHLMAQAIKALYPEAK 60

Query: 94  VAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESK 153
             +GP+IEDGFYYDF      + ++L +IEKKM+E         K  LS ++A E F  K
Sbjct: 61  FFVGPVIEDGFYYDFRVNSKLNEEDLIKIEKKMKEFAEAKLEIQKYTLSKQEALEKF--K 118

Query: 154 KEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSN 213
            +  K E+L  IP+ E V++Y+QGE+ DLCRGPH  +T +  +FFKL ++AGAY  GD  
Sbjct: 119 DDDLKQEVLAKIPSDE-VSIYKQGEFEDLCRGPHAPNT-KFLRFFKLTRIAGAYLGGDEK 176

Query: 214 RPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKG 272
           R ML+RIYGTA+  ++ L +YL+ +EE++KRDHRKL  E+ LF   E  G G+  W   G
Sbjct: 177 REMLTRIYGTAFADKESLKEYLHIIEEAKKRDHRKLGNELKLFTFDEQIGGGLPIWLSNG 236

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ ++ +  M  KI     YE +  P++L    W+ SGH+ +Y+ NM+          D
Sbjct: 237 ARL-RSKLEQMLYKIHRLRGYEPVRGPELLKAEAWKISGHYANYKENMYFTNI------D 289

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
            + + +KPMNC GH+ ++ + ++SYR+LP++  E+G V+R+E SG LHGL RVR FTQDD
Sbjct: 290 EQEYGIKPMNCVGHIKIYQNEVRSYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFTQDD 349

Query: 391 AHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKG 450
           AH+FC   Q+  + L+I + + S+ K F FE  M ++STRPEK +G +A+W+ A   +K 
Sbjct: 350 AHIFCMPSQIKEQVLEILDFVASLMKIFDFEYEM-EISTRPEKAIGDEAIWEVATKALKE 408

Query: 451 VLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFY 510
            LD      +  +  G+  G GAFYGPK +  + DA+ R WQCGTIQVDFNLP RF   Y
Sbjct: 409 ALD------EQGLKYGIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDFNLPERFELEY 462

Query: 511 VNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQE 570
            +S + K  PVM+HRA+ GS ERFIGI+ E+  G  P +++P Q  +  I+   + YA+ 
Sbjct: 463 TSSENAKERPVMLHRAILGSFERFIGILTEHCAGEFPFFIAPTQVGIVPISEVHLAYAKG 522

Query: 571 IANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
           I   L    +  E   +NE+++ KIR    +K+P+I++ GD+E S R++ +R   +   +
Sbjct: 523 IQRTLLEMGVDSEIYDKNESLSKKIRNAEKQKLPMILVIGDEELSNRAVALRDRRAKEQK 582

Query: 631 KVSLLDAIPILTKESL 646
            +S LD    L KE +
Sbjct: 583 SLS-LDEFMNLIKEKI 597


>gi|298252757|ref|ZP_06976551.1| threonyl-tRNA synthetase [Gardnerella vaginalis 5-1]
 gi|297533121|gb|EFH72005.1| threonyl-tRNA synthetase [Gardnerella vaginalis 5-1]
          Length = 660

 Score =  473 bits (1217), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 252/634 (39%), Positives = 371/634 (58%), Gaps = 45/634 (7%)

Query: 36  KKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           K  +AV +NG++ DL   + +G ++E +  +    +A++RHS  H+MA+AVQ I P+ ++
Sbjct: 15  KNIIAVRLNGELRDLYTSLHDGDTVESVALDSEDGIAIMRHSATHVMAQAVQEIRPDAKL 74

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            +GP+I+DGFYYDFD + PF+ D+L QIEK MQ II     F ++ ++ ++ARE  E   
Sbjct: 75  GVGPVIKDGFYYDFDVDTPFTPDDLKQIEKHMQRIIKESQSFRRRVVTEDEARE--EEAN 132

Query: 155 EAYKVEILESIPA-----------KENVTLY----RQGE--WFDLCRGPHVRSTGQVKKF 197
           + YK+E++    A           K  +++Y    R+G   W DLCRGPH+ +T  +K F
Sbjct: 133 QPYKLELIGDKEAALDPAASGEISKHELSMYDNVDREGNKVWSDLCRGPHLPNTRYIKAF 192

Query: 198 FKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFH 257
            KL +VA AYWRG    PML RIYGTAW +++EL  Y   +EE+ KRDHRKL +EMDLF 
Sbjct: 193 -KLERVAAAYWRGSEQNPMLQRIYGTAWPSKEELKAYTTRMEEAAKRDHRKLGQEMDLFS 251

Query: 258 IAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYR 315
             ++ G G+  +H KG  I   +  Y R +  K  Y  + TP +    L++ SGH   Y+
Sbjct: 252 FPDEIGPGLAVFHPKGAAIINAMEDYSREQHRKHHYSFVQTPHITKGGLYETSGHLQWYK 311

Query: 316 ANMFAVKCAD-------DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV 368
             M+     D       +  +    + LKPMNCP H  +F    +SYRELP+RL EFG+V
Sbjct: 312 DGMYPPMKLDEERDENGNVTRQGADYYLKPMNCPMHNLIFKSRQRSYRELPLRLFEFGTV 371

Query: 369 YRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLS 428
           YR E SG +HGL RVRG TQDD+H++CT+EQM +E   + N ++ + KDFG     ++LS
Sbjct: 372 YRYEKSGVVHGLTRVRGLTQDDSHIYCTREQMRDELKSLLNFVLGLLKDFGLNDFYLELS 431

Query: 429 TRPE-KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAI 487
           T+ E K VGSD +W++A N +  V    K S  + ++     G  AFYGPK     +DAI
Sbjct: 432 TKDEHKFVGSDEIWEEATNTLAEV---AKESGLELVDDP---GGAAFYGPKISVQARDAI 485

Query: 488 GRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           GR WQ  TIQ+DFNLP RF   Y+ +      PVMIHRA+FGSIERF  I++E++ G  P
Sbjct: 486 GRTWQVSTIQLDFNLPERFKLEYIAADGSHQRPVMIHRALFGSIERFFAILLEHYAGAFP 545

Query: 548 LWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIII 607
            WL+P+Q     +      + Q++ + L+ + +  E D  ++    KIR  S  K+P  +
Sbjct: 546 AWLAPVQVTGVPVADEFAPHLQKLISDLEENMVRCEMDNSDDRFGKKIRNASKSKVPFTL 605

Query: 608 ICGDKEASERSIGIR-RFGSTTTQKVSLLDAIPI 640
           I G+++ +  ++  R R GS        L+ +P+
Sbjct: 606 IAGEEDVNNNAVSFRFRDGSQ-------LNGVPV 632


>gi|148273002|ref|YP_001222563.1| threonyl-tRNA synthetase [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|147830932|emb|CAN01876.1| thrS [Clavibacter michiganensis subsp. michiganensis NCPPB 382]
          Length = 684

 Score =  473 bits (1217), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 251/644 (38%), Positives = 376/644 (58%), Gaps = 49/644 (7%)

Query: 36  KKAVAVAINGKVCDLSDPVREGSI-EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           +  VA+ ++G++ DL+  V  G + E +  + P  L+++RHS AH+MA+AVQ I PE ++
Sbjct: 38  RAVVAMRVDGELKDLAADVAPGDVVEPVRIDSPDGLSILRHSAAHVMAQAVQQINPEAKL 97

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            IGP + DGFY+DFD  +PF+ ++L  I K M+ I+ +   F ++ ++ E+AREL     
Sbjct: 98  GIGPPVTDGFYFDFDVAEPFTPEDLKAISKNMERIVRQGQRFTRRVVTEEEARELM--AD 155

Query: 155 EAYKVEIL--------------ESIP-AKENVTLY-----RQGE--WFDLCRGPHVRSTG 192
           E YK+E++              ES+      +T+Y     + GE  W DLCRGPH+ ST 
Sbjct: 156 EPYKLELIGLKGGSSEELGEDGESVEVGGAELTVYENVDGKTGEVFWRDLCRGPHLPSTR 215

Query: 193 QVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLARE 252
            V   + L +VA AYWRG    P L RIYGTAW T+ EL  Y   +EE+ KRDHR+L  E
Sbjct: 216 MVGNGWALSRVAAAYWRGSEKNPQLQRIYGTAWPTKDELRAYQGRIEEALKRDHRRLGAE 275

Query: 253 MDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGH 310
           +DLF   ++ GSG+  +H KG  I + +  Y RR+ +   YE + +P +   +L++ SGH
Sbjct: 276 LDLFSFPDEIGSGLAVFHPKGGIIRREMEDYSRRRHETAGYEFVYSPHITKSNLFETSGH 335

Query: 311 WDSYRANMFAVKCADDTIKDL-------RTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
            D Y+  MF     D+   D          + LKPMNCP HV ++    +SYRELP+RL 
Sbjct: 336 LDFYKDGMFPAMHLDEARNDEGEITRQGADYYLKPMNCPMHVLIYRSRQRSYRELPLRLF 395

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFG+VYRNE SG +HGL RVRG TQDDAH+F T+E+M +E       ++S+ +D+G +  
Sbjct: 396 EFGTVYRNEKSGVIHGLTRVRGMTQDDAHIFTTRERMADELKGTLEFVLSLLRDYGLDDF 455

Query: 424 MVKLSTR-PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL----GEGAFYGPK 478
            ++LST+ PEK VGSD +W++A   ++ V           ++TG+ L       AFYGPK
Sbjct: 456 YLELSTKDPEKFVGSDEVWEEATETLRQVA----------VDTGLELVPDPAGAAFYGPK 505

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
                +DAIGR WQ  TIQ+DFNLP RF   Y  +   +  PVMIHRA+FGSIERF G++
Sbjct: 506 ISVQARDAIGRTWQMSTIQLDFNLPERFGLEYTANDGTRKQPVMIHRALFGSIERFFGVL 565

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
            E++ G  P+WLSP+Q +   +     EY   + + L++  + ++ D  ++ +  KIR H
Sbjct: 566 TEHYAGAFPVWLSPVQVVGIPVAEDYEEYLGGVLDRLRAEGVRVQLDTSDDRMPKKIRTH 625

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +  ++P  +I G+ + +  S+  R    T    V + +A+  +T
Sbjct: 626 TKARVPYQLIAGEDDRAAGSVSFRFRDGTQVNGVPVAEAVERIT 669


>gi|166365884|ref|YP_001658157.1| threonyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
 gi|166088257|dbj|BAG02965.1| threonyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
          Length = 599

 Score =  473 bits (1217), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 241/561 (42%), Positives = 350/561 (62%), Gaps = 16/561 (2%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           L  IRH+ +H+MA AVQ ++P+ QV IGP  E GFYYDFD  +PF+  +L  I+K+M +I
Sbjct: 18  LKRIRHTTSHVMAMAVQKLFPKAQVTIGPWTETGFYYDFDVPEPFTDKDLKDIKKEMVKI 77

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE-WFDLCRGPHV 188
           I +  P +++ +S E+A +  ++  E YK+EIL  I  +E +TLY  G+ W+DLC GPH+
Sbjct: 78  INKKLPVIREQVSREEAEKRIKAINEVYKLEILAGI--QEPITLYHLGDAWWDLCAGPHL 135

Query: 189 RSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHR 247
            +T ++  K  +L  VAGAYWRGD N+  L RIYGTAW   Q+L +Y    EE+ KRDHR
Sbjct: 136 DNTSELDPKAIELETVAGAYWRGDENKAQLQRIYGTAWENPQQLAEYKRRKEEALKRDHR 195

Query: 248 KLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLW 305
           KL +E+ LF  ++  G G+  W  KG  I   L  ++++ ++K  Y  + TP +    L+
Sbjct: 196 KLGKELGLFIFSDSVGPGLPLWTPKGTLIRSLLEDFLKKEQLKRGYLPVVTPHIARVDLF 255

Query: 306 QQSGHWDSYRANMFAVKCADDTIKDLRT-FALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           + SGHW  Y+ +MF +   D+        F LKPMNCP H+ ++   L+SYRELP+RLAE
Sbjct: 256 KISGHWQKYKEDMFPMMADDEESAGKEIGFVLKPMNCPFHIQIYKSDLRSYRELPMRLAE 315

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FG+VYR E SG L GL RVRGFT DD+H+F T EQ+  E L + +LI++++K    +   
Sbjct: 316 FGTVYRYEQSGELGGLTRVRGFTVDDSHLFVTPEQLDKEFLSVVDLILTVFKSLQLKNFK 375

Query: 425 VKLSTR-PE--KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            +LS R PE  K +GSD  W+ A++ ++  + T+     D        GE AFYGPK ++
Sbjct: 376 ARLSFRDPESDKYIGSDEAWEKAQSAIRKAVQTL---GMDYFEAP---GEAAFYGPKLDF 429

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
           I +DA+ R+WQ GT+QVD+NLP RF   YV     +  PVMIHRA FGS+ER IGI+IE 
Sbjct: 430 IFQDALEREWQLGTVQVDYNLPERFELEYVAEDGNRKRPVMIHRAPFGSLERLIGILIEE 489

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G+ PLWL+P+Q  +  ++ + ++YA+E+   ++   +  ETD   E +   IR     
Sbjct: 490 YAGDFPLWLAPVQIRLLPVSDTQLDYAKEVTAKMQLLGIRAETDTSGERLGKMIRNAETA 549

Query: 602 KIPIIIICGDKEASERSIGIR 622
           KIP++ + G KE    S+ IR
Sbjct: 550 KIPVMAVVGAKEMESNSLSIR 570


>gi|283783304|ref|YP_003374058.1| threonine--tRNA ligase [Gardnerella vaginalis 409-05]
 gi|283441631|gb|ADB14097.1| threonine--tRNA ligase [Gardnerella vaginalis 409-05]
          Length = 676

 Score =  473 bits (1216), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 252/634 (39%), Positives = 371/634 (58%), Gaps = 45/634 (7%)

Query: 36  KKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           K  +AV +NG++ DL   + +G ++E +  +    +A++RHS  H+MA+AVQ I P+ ++
Sbjct: 31  KNIIAVRLNGELRDLYTSLHDGDTVESVALDSEDGIAIMRHSATHVMAQAVQEIRPDAKL 90

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            +GP+I+DGFYYDFD + PF+ D+L QIEK MQ II     F ++ ++ ++ARE  E   
Sbjct: 91  GVGPVIKDGFYYDFDVDTPFTPDDLKQIEKHMQHIIKESQSFRRRVVTEDEARE--EEAN 148

Query: 155 EAYKVEILESIPA-----------KENVTLY----RQGE--WFDLCRGPHVRSTGQVKKF 197
           + YK+E++    A           K  +++Y    R+G   W DLCRGPH+ +T  +K F
Sbjct: 149 QPYKLELIGDKEAALDPAASGEISKHELSMYDNVDREGNKVWSDLCRGPHLPNTRYIKAF 208

Query: 198 FKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFH 257
            KL +VA AYWRG    PML RIYGTAW +++EL  Y   +EE+ KRDHRKL +EMDLF 
Sbjct: 209 -KLERVAAAYWRGSEQNPMLQRIYGTAWPSKEELKAYTTRMEEAAKRDHRKLGQEMDLFS 267

Query: 258 IAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYR 315
             ++ G G+  +H KG  I   +  Y R +  K  Y  + TP +    L++ SGH   Y+
Sbjct: 268 FPDEIGPGLAVFHPKGAAIINAMEDYSREQHRKHHYSFVQTPHITKGGLYETSGHLQWYK 327

Query: 316 ANMFAVKCAD-------DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV 368
             M+     D       +  +    + LKPMNCP H  +F    +SYRELP+RL EFG+V
Sbjct: 328 DGMYPPMKLDEERDENGNVTRQGADYYLKPMNCPMHNLIFKSRQRSYRELPLRLFEFGTV 387

Query: 369 YRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLS 428
           YR E SG +HGL RVRG TQDD+H++CT+EQM +E   + N ++ + KDFG     ++LS
Sbjct: 388 YRYEKSGVVHGLTRVRGLTQDDSHIYCTREQMRDELKSLLNFVLGLLKDFGLNDFYLELS 447

Query: 429 TRPE-KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAI 487
           T+ E K VGSD +W++A N +  V    K S  + ++     G  AFYGPK     +DAI
Sbjct: 448 TKDEHKFVGSDEIWEEATNTLAEV---AKESGLELVDDP---GGAAFYGPKISVQARDAI 501

Query: 488 GRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           GR WQ  TIQ+DFNLP RF   Y+ +      PVMIHRA+FGSIERF  I++E++ G  P
Sbjct: 502 GRTWQVSTIQLDFNLPERFKLEYIAADGSHQRPVMIHRALFGSIERFFAILLEHYAGAFP 561

Query: 548 LWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIII 607
            WL+P+Q     +      + Q++ + L+ + +  E D  ++    KIR  S  K+P  +
Sbjct: 562 AWLAPVQVTGVPVADEFAPHLQKLISDLEENMVRCEMDNSDDRFGKKIRNASKSKVPFTL 621

Query: 608 ICGDKEASERSIGIR-RFGSTTTQKVSLLDAIPI 640
           I G+++ +  ++  R R GS        L+ +P+
Sbjct: 622 IAGEEDVNNNAVSFRFRDGSQ-------LNGVPV 648


>gi|298491630|ref|YP_003721807.1| threonyl-tRNA synthetase ['Nostoc azollae' 0708]
 gi|298233548|gb|ADI64684.1| threonyl-tRNA synthetase ['Nostoc azollae' 0708]
          Length = 606

 Score =  473 bits (1216), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 240/574 (41%), Positives = 353/574 (61%), Gaps = 15/574 (2%)

Query: 69  SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQE 128
           +L  IRH+ +HIMA AVQ ++P+VQV IGP IE+GFYYDFD  +PFS  +L  I+K+M +
Sbjct: 23  TLKKIRHTASHIMAMAVQKLFPKVQVTIGPWIENGFYYDFDNPEPFSDKDLKAIQKEMVK 82

Query: 129 IIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE-WFDLCRGPH 187
           II R  P +++ +S E+A++L E  KE YK+EIL  I  +E +T+Y  GE W+DLC GPH
Sbjct: 83  IINRKLPLVREEVSREEAQKLIEGIKEPYKLEILADI-KQEPITIYHLGEEWWDLCAGPH 141

Query: 188 VRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDH 246
           V +T  +  K  +L  VAGAYWRGD  +  L RIY TAW T ++L +Y     E+ +RDH
Sbjct: 142 VENTKDINPKAIELESVAGAYWRGDETKAQLQRIYATAWETPEQLAEYKRRKAEALRRDH 201

Query: 247 RKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHL 304
           RKL +E+ LF  A+  G G+  W  KG  +   L  ++++ ++K  Y  + TP +    L
Sbjct: 202 RKLGKELGLFIFADPVGPGLPLWTPKGTLLRTILEDFLKKEQLKRGYLTVVTPHIARVDL 261

Query: 305 WQQSGHWDSYRANMFAV-KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           ++ SGHW  Y+ ++F +     +     + F LKPMNCP H+ ++   L+SYRELP+RLA
Sbjct: 262 FKTSGHWQKYKEDIFPLMAEDAEAAAIEQGFVLKPMNCPFHIQIYKGELRSYRELPMRLA 321

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFG+VYR E SG L GL RVRGFT DD+H+F T EQ+ NE L + +LI+++++    +  
Sbjct: 322 EFGTVYRYEQSGELGGLTRVRGFTVDDSHLFVTPEQLDNEFLSVVDLILTVFRSLQLKNF 381

Query: 424 MVKLSTR---PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
             +LS R    +K +G D +WD +E  ++     ++    D       +GE AFYGPK +
Sbjct: 382 KARLSFRDPASDKYIGGDEVWDKSEGAIR---RAVQQLGMDHFEG---IGEAAFYGPKLD 435

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           +I  DA+ R+WQ GT+QVD+NLP RF+  YV     +  PVMIHRA FGS+ER IGI+IE
Sbjct: 436 FIFSDALDREWQLGTVQVDYNLPERFDLEYVAEDGARKRPVMIHRAPFGSLERLIGILIE 495

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
            + G+ PLWL+P+Q  +  +  + +++ +E+   + +  +  E D   E +   IR    
Sbjct: 496 EYAGDFPLWLAPVQIRLLPVGEAQIDFTKEVVAKMLALGIRAEVDLSGERLGKLIRNAEK 555

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
            KIP++ + G KE    S+ IR   S     +S+
Sbjct: 556 DKIPVMAVVGVKEVETNSLSIRTRASGELGVISV 589


>gi|75908999|ref|YP_323295.1| threonyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
 gi|75702724|gb|ABA22400.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Anabaena
           variabilis ATCC 29413]
          Length = 615

 Score =  473 bits (1216), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 243/580 (41%), Positives = 358/580 (61%), Gaps = 21/580 (3%)

Query: 69  SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQE 128
           +L  IRH+ +H+MA AVQ ++P+ QV IGP IE+GFYYDFD  +PF+  +L  I+K+M +
Sbjct: 32  TLKKIRHTASHVMAMAVQKLFPKAQVTIGPWIENGFYYDFDSPEPFTDKDLKAIQKEMVK 91

Query: 129 IIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG-EWFDLCRGPH 187
           II R  P +++ +S E+A    +  KE YK+EIL  I + E +T+Y  G EW+DLC GPH
Sbjct: 92  IINRKLPVVREEVSREEAERRIQEIKEPYKLEILADIKS-EPITIYHLGNEWWDLCAGPH 150

Query: 188 VRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDH 246
           V +T  +  K  +L  VAGAYWRGD  +  L RIY TAW + ++L +Y    EE+ +RDH
Sbjct: 151 VENTKDLNPKAIELESVAGAYWRGDETKAQLQRIYATAWESPEQLAEYKRRKEEALRRDH 210

Query: 247 RKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHL 304
           RKL +E+ LF  +E  G G+  W  KG  +  TL  ++++ ++K  Y  + TP +    L
Sbjct: 211 RKLGKELGLFIFSEQVGPGLPLWTPKGTLLRSTLEQFLQQEQLKRGYLPVVTPHIARVDL 270

Query: 305 WQQSGHWDSYRANMFAV-KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           ++ SGHW  Y+ +MF +    +      + F LKPMNCP H+ ++   L+SYRELP+RLA
Sbjct: 271 FKTSGHWQKYKEDMFPLMAEDEAAAAIEQGFVLKPMNCPFHIQIYKSELRSYRELPMRLA 330

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFG+VYR E SG L GL RVRGFT DD+H+F T EQ+ +E L + +LI+S++K    +  
Sbjct: 331 EFGTVYRYEQSGELGGLTRVRGFTVDDSHLFVTPEQLDSEFLNVVDLILSVFKSLQLKNF 390

Query: 424 MVKLSTR---PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
             +LS R    +K +GSD +W+ AE  ++  ++ +     + I      GE AFYGPK +
Sbjct: 391 KARLSFRDPASDKYIGSDEVWNKAEGAIRRAVEQLGMEHFEGI------GEAAFYGPKLD 444

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           +I  DA+ R+WQ GT+QVD+NLP RF+  YV     +  PVMIHRA FGS+ER IGI+IE
Sbjct: 445 FIFSDALEREWQLGTVQVDYNLPERFDLEYVAEDGTRKRPVMIHRAPFGSLERLIGILIE 504

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
            + G+ PLWL+P+QA +  +  + +++ +++   L+S  +  E D   + +   IR    
Sbjct: 505 EYAGDFPLWLAPVQARLLPVGEAQLDFTKDVVAKLRSLGIRAEVDTSGDRLGKLIRNAEK 564

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
            KIP++ + G KE    S+ IR      T+    L AIP+
Sbjct: 565 DKIPVMGVVGAKEVETNSLSIR------TRASGELGAIPV 598


>gi|256391426|ref|YP_003112990.1| threonyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
 gi|256357652|gb|ACU71149.1| threonyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
          Length = 666

 Score =  472 bits (1215), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 254/669 (37%), Positives = 391/669 (58%), Gaps = 38/669 (5%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAE--SISRSLAKKAVAVAINGKVCDLSDPVREGSI- 59
           SD  +T  DG  ++      G+ +A+  + +RS+    +      ++ DL+   + G + 
Sbjct: 2   SDFAVTIADGPDRDERTVTVGTTLADLFAGNRSVVAARLTDPTGTRLVDLATLAKAGDVV 61

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           E +  +     A+IRHS AH++A+AVQ  +P+ ++ IGP I +GFYYDFD E+PF+ ++L
Sbjct: 62  EPVAADSEDGRAIIRHSTAHVLAQAVQQAFPDAKLGIGPPIRNGFYYDFDVEKPFTPEDL 121

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL------ESIPAKENV-- 171
             +E +MQ II +   F ++ ++ E ARE  E   E YK+E++       S  A E V  
Sbjct: 122 KALESRMQTIIKQGQLFSRRAVTDEDARE--ELAAEPYKLELIGLKGKASSDDAGEGVDV 179

Query: 172 -------TLY-----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPML 217
                  T+Y     + G+  W DLCRGPHV ST  +  F KLM+ A AYWRG    P L
Sbjct: 180 EVGAGELTIYDNLDAKSGDLCWKDLCRGPHVPSTRFIPAF-KLMRSAAAYWRGSEKNPQL 238

Query: 218 SRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIF 276
            RIYGTAW T+  L  +L FL E+EKRDHRK+  E+DLF   ++ GSG+  +H KG  I 
Sbjct: 239 QRIYGTAWETRDALKAHLEFLAEAEKRDHRKIGAELDLFSFPDELGSGLPVFHPKGGTIR 298

Query: 277 QTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFA 335
           + +  Y R++ ++  YE +NTP +   +L++ SGH D Y+  MF     D+     + + 
Sbjct: 299 RVMEDYSRKRHEEAGYEFVNTPHITKGNLYEISGHLDWYKDGMFPPMVLDEG-HGKQEYY 357

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC 395
           LKPMNCP H  ++    KSYR+LP+RL EFG+VYR E SG +HGL RVRG TQDDAH++C
Sbjct: 358 LKPMNCPMHNLIYRARGKSYRDLPLRLFEFGTVYRYEKSGVVHGLTRVRGLTQDDAHIYC 417

Query: 396 TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR-PEKRVGSDALWDDAENIMKGVLDT 454
           T+EQM +E + +   ++ + +D+G     ++LST+ PEK VG+D  W+ A + ++ V   
Sbjct: 418 TREQMRDELVSLLRFVLDLLRDYGLNDFYLELSTKDPEKYVGTDEEWELATDTLREV--- 474

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH 514
              +  + +   +  G  AFYGPK     +DAIGR WQ  TIQ+DF LP RF+  Y  + 
Sbjct: 475 ---AEGEDLELVMDPGGAAFYGPKISVQARDAIGRTWQMSTIQLDFQLPQRFDLEYQAAD 531

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANL 574
             +  P+MIHRA+FGSIERF G++ E++ G  P WL+P+Q +   IT + V Y + +A+ 
Sbjct: 532 GSRQRPIMIHRALFGSIERFFGVLTEHYAGAFPAWLAPVQVVGIPITDAHVPYLELVASK 591

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           L++  + +E D  ++ +  KIR    +K+P +++ GD + ++ ++  R         V +
Sbjct: 592 LRAEGVRVEIDSSDDRMQKKIRNAQKQKVPYMLLAGDDDVAKAAVSFRYRSGEQNNGVPV 651

Query: 635 LDAIPILTK 643
            +A+  + K
Sbjct: 652 DEAVAEIVK 660


>gi|15835484|ref|NP_297243.1| threonyl-tRNA synthetase [Chlamydia muridarum Nigg]
 gi|270285665|ref|ZP_06195059.1| threonyl-tRNA synthetase [Chlamydia muridarum Nigg]
 gi|270289673|ref|ZP_06195975.1| threonyl-tRNA synthetase [Chlamydia muridarum Weiss]
 gi|301337060|ref|ZP_07225262.1| threonyl-tRNA synthetase [Chlamydia muridarum MopnTet14]
 gi|13878797|sp|Q9PJF9|SYT_CHLMU RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|7190897|gb|AAF39666.1| threonyl-tRNA synthetase [Chlamydia muridarum Nigg]
          Length = 635

 Score =  472 bits (1215), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 251/609 (41%), Positives = 367/609 (60%), Gaps = 21/609 (3%)

Query: 17  FPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIRH 75
            P  A+  D+A  +  S         IN +  DLS  +++G ++  +T +DP+   +  H
Sbjct: 13  LPEGASAMDLASKMKNSHC--FAGALINDQEKDLSTTLKDGDTVLFLTWDDPQGREIFLH 70

Query: 76  SCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSP 135
           + AHI+A+AV  +WP  Q  IGP+I+ GFYYDF      S ++   IE  M + IA +  
Sbjct: 71  TSAHILAQAVLRLWPSAQPTIGPVIDQGFYYDF-ANLSISEEDFPAIEA-MAKAIAEEKL 128

Query: 136 FLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVK 195
            + + +  +K   L       +K+E++  +P +  ++ Y+QGE+ DLCRGPH+ ST  VK
Sbjct: 129 AISRQVFSDKEETLAYFSDNPFKIELITELPEEATISAYKQGEFLDLCRGPHLPSTAPVK 188

Query: 196 KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDL 255
            F KL++ + AYWRGD ++  L RIYG A+ T +EL ++L+ LEE++KRDHR L  ++DL
Sbjct: 189 AF-KLLRTSAAYWRGDPSKESLIRIYGIAFPTTKELKEHLHQLEEAKKRDHRVLGTKLDL 247

Query: 256 FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSY 314
           F      +G+ F+H +G  I+  LI Y +R  +   Y++I TPQ++ + LW+ SGHW++Y
Sbjct: 248 FSQQSYSAGMPFFHPRGMVIWNALIDYWKRLHQLAGYQQIQTPQLMSRELWEISGHWENY 307

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
           + NM+ +        D   +A+KPMNCPG +  +   L SYRE P+R+AE G V+R+E S
Sbjct: 308 KENMYTLTV------DEEDYAIKPMNCPGCMLYYKTQLHSYREFPLRIAEIGHVHRHELS 361

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK- 433
           G+L GLMRVR F QDDAHVF T EQ+  E L I NL+  +Y  FG +   ++LSTRPE+ 
Sbjct: 362 GALSGLMRVRTFHQDDAHVFLTPEQVEEETLNILNLVSELYGTFGLD-YHLELSTRPEQG 420

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
            +GSD LW+ A   +K  L  +K+     I+ G    EGAFYGPK +  +KDAI R WQC
Sbjct: 421 TIGSDDLWELATEALKNAL--VKSQKPFIISPG----EGAFYGPKIDIHVKDAINRTWQC 474

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI 553
           GTIQ+D  LP RF+  Y N   EK  P+M+HRA+FGSIERF+GI+IE+FKG  PLWLSP 
Sbjct: 475 GTIQLDMFLPERFDLKYTNPQGEKSTPIMLHRALFGSIERFLGILIEHFKGRFPLWLSPE 534

Query: 554 QAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
              + T+       AQE+A       +    D  +E+++ KIR     ++  +I  GDKE
Sbjct: 535 HVRIITVADRHEARAQELAKYFTQQGILATVDQASESVSKKIRNAQNMQVNYMITIGDKE 594

Query: 614 ASERSIGIR 622
              + + +R
Sbjct: 595 LETQLLAVR 603


>gi|300863511|ref|ZP_07108463.1| threonyl-tRNA synthetase [Oscillatoria sp. PCC 6506]
 gi|300338467|emb|CBN53605.1| threonyl-tRNA synthetase [Oscillatoria sp. PCC 6506]
          Length = 608

 Score =  472 bits (1214), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 244/597 (40%), Positives = 365/597 (61%), Gaps = 16/597 (2%)

Query: 50  LSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD 109
           LS P +   I +    +   L  IRH+ +H+MA AVQ ++P+  V IGP IE+GFYYDFD
Sbjct: 7   LSAPEQPAKIHLPRTSESEPLKKIRHTTSHVMAMAVQKLFPKALVTIGPWIENGFYYDFD 66

Query: 110 KEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKE 169
             + F+  +L  I+K+M +II R  P +++ +S E+A    +   E YK+EILE +   E
Sbjct: 67  IPEAFTEKDLKSIKKEMIKIINRKLPLIREEVSREEAERRIKEINEPYKLEILEGL--TE 124

Query: 170 NVTLYRQG-EWFDLCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNT 227
            +T+Y  G EW+DLC GPH+ +T ++  K  +L  VAGAYWRGD  +  L RIYGTAW  
Sbjct: 125 PITIYHLGDEWWDLCAGPHLENTSELNPKAIELESVAGAYWRGDETKAQLQRIYGTAWEN 184

Query: 228 QQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR- 285
            ++L +Y    EE+ +RDHRKL +E+ LF  A+  G G+  W  KG  +   L  ++++ 
Sbjct: 185 PEQLQEYQRRKEEALRRDHRKLGKELGLFIFADVVGPGLPLWTPKGTILRSILEDFLKQE 244

Query: 286 KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADD-TIKDLRTFALKPMNCPGH 344
           ++K  Y  + TP +    L++ SGHW  Y+ +MF +   D+ + K  + F LKPMNCP H
Sbjct: 245 QVKRGYLPVVTPHIGRVDLFKTSGHWQKYKEDMFPMMAEDEESAKAEQGFVLKPMNCPFH 304

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           + ++   L+SYRELP+RLAEFG+VYR E SG L GL RVRGFT DD+H+F T EQ+  E 
Sbjct: 305 IQIYKSELRSYRELPMRLAEFGTVYRYEQSGELGGLTRVRGFTVDDSHLFVTPEQLDAEF 364

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTR---PEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
           L + +LI+S++K    +    +LS R    +K +GSD +W+ ++  ++  ++T+      
Sbjct: 365 LSVVDLILSVFKSLQLKNFKARLSFRDPTSDKYMGSDEVWEQSQGAIRRAVETLG----- 419

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
            +N    +GE AFYGPK ++I  DA+ R+WQ GT+QVD+NLP RF+  YV     +  PV
Sbjct: 420 -MNYFEGIGEAAFYGPKLDFIFSDALDREWQLGTVQVDYNLPERFDLEYVAEDGTRKRPV 478

Query: 522 MIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLS 581
           MIHRA FGS+ER IGI+IE + G+ P+WL+PIQ  +  +++  + +AQE+A  ++   + 
Sbjct: 479 MIHRAPFGSLERLIGILIEEYAGDFPVWLAPIQVRLLPVSNDFLPFAQEVAAKMRILGIR 538

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
            E D  +E +   IR     KIP++ I G KE    S+ IR   S     +++ + I
Sbjct: 539 AEADVSSERLGKLIRNAEKDKIPVMGIVGAKEVESNSLSIRTRASGELGMIAVDEVI 595


>gi|303278011|ref|XP_003058299.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226460956|gb|EEH58250.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 698

 Score =  472 bits (1214), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 248/594 (41%), Positives = 362/594 (60%), Gaps = 25/594 (4%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           I+++T ++   L  IRH+ AHI A A Q ++P+ +  IGP I+ GFYYDFD +  FS  +
Sbjct: 108 IKLMTSDESEELLKIRHTAAHICAMATQKLFPDAKCTIGPWIDRGFYYDFDYKPGFSEQD 167

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L +I+K+M +II +D P  ++ +S E+A    +   E YK+EIL++I   E +T+Y  GE
Sbjct: 168 LKKIKKQMIKIINKDYPLRREEVSREEATRRIKELNEPYKLEILDAI-KTEPITIYHIGE 226

Query: 179 ------WFDLCRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQEL 231
                 W+DLC GPHV ST ++  K   L  VAGAYWRGD  +PML RIYGTAW + +EL
Sbjct: 227 EGDENAWWDLCAGPHVESTKKIHPKAIDLEAVAGAYWRGDETKPMLQRIYGTAWGSPEEL 286

Query: 232 TQYLYFLEESEKRDHRKLAREMDLFHIAED--GSGVIFWHRKGWKIFQTLISYMRRKI-- 287
             Y  F  E+ +RDHRK+ +E++LF I ++  G G++FWH KG  + + +I    + I  
Sbjct: 287 VAYNEFKAEAARRDHRKIGKELNLFSIQQEEVGGGLVFWHPKG-ALMRNIIENFWKDIHM 345

Query: 288 KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
              Y+ + TP V    LW+ SGH D Y  NM+     +D      T+ LKPMNCP HVAV
Sbjct: 346 ARGYDLLYTPHVGKLDLWKTSGHADFYAENMYKPMDVED-----ETYQLKPMNCPFHVAV 400

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
           +  G  SYR+LP+R AE G+VYR E SG++HGL RVRGFTQDDAH+FC  +Q+ +E   +
Sbjct: 401 YKDGYFSYRDLPIRWAEMGTVYRYERSGTMHGLFRVRGFTQDDAHIFCLPDQIADEIKGV 460

Query: 408 HNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGV 467
            +L   I   FGF +  V LST+PEK VG   +WD AE  +K  L  +K    +     V
Sbjct: 461 LDLTEDILSTFGFTEFEVNLSTKPEKSVGGPEIWDKAEGALKEAL-AVKGWDYE-----V 514

Query: 468 LLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAV 527
             G GAFYGPK +  + DAIGR WQC T+Q+DFNLP RF   Y++  + K  P+MIHRA+
Sbjct: 515 DEGGGAFYGPKIDIKILDAIGRKWQCSTVQLDFNLPERFELTYIDEENSKRRPIMIHRAI 574

Query: 528 FGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR 587
           FGS+ERF GI+ EN+ G  PLW++P Q  +  +T +   Y +E    +K+  + ++   +
Sbjct: 575 FGSLERFYGILTENYAGAFPLWIAPTQVRLLPVTDAVTPYVEETVARMKAAGVRVDVTSK 634

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            E +   +R    +K+P++ + G++EA + ++ +R +       +++ + I  L
Sbjct: 635 -ERLAKLVRNAEKQKVPVMCVVGEQEAKDGTLAVRTYADGDVGVITVDEVIARL 687


>gi|308234806|ref|ZP_07665543.1| threonyl-tRNA synthetase [Gardnerella vaginalis ATCC 14018]
 gi|311114574|ref|YP_003985795.1| threonine--tRNA ligase [Gardnerella vaginalis ATCC 14019]
 gi|310946068|gb|ADP38772.1| threonine--tRNA ligase [Gardnerella vaginalis ATCC 14019]
          Length = 676

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 252/634 (39%), Positives = 370/634 (58%), Gaps = 45/634 (7%)

Query: 36  KKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           K  +AV +NG++ DL   +  G ++E +  +    +A++RHS  H+MA+AVQ I P+ ++
Sbjct: 31  KNIIAVRLNGELRDLYTSLHNGDTVESVALDSEDGIAIMRHSATHVMAQAVQEIRPDAKL 90

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            +GP+I+DGFYYDFD + PF+ D+L QIEK MQ II     F ++ ++ ++ARE  E   
Sbjct: 91  GVGPVIKDGFYYDFDVDTPFTPDDLKQIEKHMQRIIKESQSFRRRVVTEDEARE--EEAN 148

Query: 155 EAYKVEILESIPA-----------KENVTLY----RQGE--WFDLCRGPHVRSTGQVKKF 197
           + YK+E++    A           K  +++Y    R+G   W DLCRGPH+ +T  +K F
Sbjct: 149 QPYKLELIGDKEAALDPAAAGEISKHELSMYDNLDREGNKVWSDLCRGPHLPNTRYIKAF 208

Query: 198 FKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFH 257
            KL +VA AYWRG  + PML RIYGTAW +++EL  Y   +EE+ KRDHRKL +EMDLF 
Sbjct: 209 -KLERVAAAYWRGSEHNPMLQRIYGTAWPSKEELKAYTTRMEEAAKRDHRKLGQEMDLFS 267

Query: 258 IAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYR 315
             ++ G G+  +H KG  I   +  Y R +  K  Y  + TP +    L++ SGH   Y+
Sbjct: 268 FPDEIGPGLAVFHPKGAAIINAMEDYSREQHRKHHYSFVQTPHITKGGLYETSGHLQWYK 327

Query: 316 ANMFAVKCAD-------DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV 368
             M+     D       +  +    + LKPMNCP H  +F    +SYRELP+RL EFG+V
Sbjct: 328 DGMYPPMKLDEERDENGNVTRQGADYYLKPMNCPMHNLIFKSRQRSYRELPLRLFEFGTV 387

Query: 369 YRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLS 428
           YR E SG +HGL RVRG TQDD+H++CT+EQM +E   + N ++ + KDFG     ++LS
Sbjct: 388 YRYEKSGVVHGLTRVRGLTQDDSHIYCTREQMRDELKSLLNFVLGLLKDFGLNDFYLELS 447

Query: 429 TRPE-KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAI 487
           T+ E K VGSD +W++A N +  V    K S  + ++     G  AFYGPK     +DAI
Sbjct: 448 TKDEHKFVGSDEIWEEATNTLAEV---AKESGLELVDDP---GGAAFYGPKISVQARDAI 501

Query: 488 GRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           GR WQ  TIQ+DFNLP RF   Y+ +      PVMIHRA+FGSIERF  I++E++ G  P
Sbjct: 502 GRTWQVSTIQLDFNLPERFKLEYIAADGSHQRPVMIHRALFGSIERFFAILLEHYAGAFP 561

Query: 548 LWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIII 607
            WL+P+Q     +      + Q+  + L+ + +  E D  ++    KIR  S  K+P  +
Sbjct: 562 AWLAPVQVTGVPVADEFAPHLQKFISDLEENMVRCEMDSSDDRFGKKIRNASKSKVPFTL 621

Query: 608 ICGDKEASERSIGIR-RFGSTTTQKVSLLDAIPI 640
           I G+++ +  ++  R R GS        L+ +P+
Sbjct: 622 IAGEEDVNNNAVSFRFRDGSQ-------LNGVPV 648


>gi|88856273|ref|ZP_01130933.1| threonyl-tRNA synthetase [marine actinobacterium PHSC20C1]
 gi|88814592|gb|EAR24454.1| threonyl-tRNA synthetase [marine actinobacterium PHSC20C1]
          Length = 653

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 250/641 (39%), Positives = 371/641 (57%), Gaps = 42/641 (6%)

Query: 36  KKAVAVAINGKVCDLSDPVRE-GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           +  VA+ +NG++ DL++ V +  ++E +T + P  L ++RHS AH+ A+A+Q+I PE ++
Sbjct: 12  RNVVAMRVNGELKDLAETVTDTDAVEAVTIDSPDGLNILRHSAAHVAAQAIQTINPEAKL 71

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            IGP + DGFYYDFD E+PF+ ++L  I K M  II +   F ++ ++  +ARE  E   
Sbjct: 72  GIGPPVTDGFYYDFDVEEPFTPEDLKAITKAMDRIIRQGQRFQRRVVTEAEARE--ELAN 129

Query: 155 EAYKVEIL---------------ESIP-AKENVTLY-----RQGE--WFDLCRGPHVRST 191
           E YK+E++               ES+      +T+Y     + GE  W DLCRGPH+ +T
Sbjct: 130 EPYKLELIGLKGAVSEGDADSDNESVEVGGTELTIYDNIDGKTGEVYWKDLCRGPHLPNT 189

Query: 192 GQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAR 251
             +   + L + A AYWRG      L R+YGTAW T+ EL +Y    EE+ KRDHRKL  
Sbjct: 190 RMIGNGWSLTRTAAAYWRGSEKNKQLQRVYGTAWPTKDELREYQARQEEALKRDHRKLGA 249

Query: 252 EMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSG 309
           E+DLF   ++ GSG+  +H KG  I   + +Y R R +++ Y  +NTP +  + L++ SG
Sbjct: 250 ELDLFSFPDEIGSGLAVFHPKGGIIRHEMENYSRTRHLQEGYSFVNTPHITKEALFETSG 309

Query: 310 HWDSYRANMFAVKCADDT-------IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
           H   Y+  MF     D+         +    + LKPMNCP H+ ++    +SYRELP+RL
Sbjct: 310 HLGWYKDGMFPPMHLDEARNEEGEITRQGADYYLKPMNCPMHILIYKSSGRSYRELPMRL 369

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG+VYRNE SG +HGL RVRG T DDAH+F TKE M  E     N ++S+ +D+G   
Sbjct: 370 FEFGTVYRNEKSGVIHGLTRVRGLTMDDAHIFTTKEGMKAELTNTLNFVLSLLRDYGLTD 429

Query: 423 IMVKLSTR-PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
             ++LST+ PEK VG D +WD+A   +  V      +++  +      G  AFYGPK   
Sbjct: 430 FYLELSTKDPEKYVGDDEIWDEATQTLAEV------AAESGLELVPDPGGAAFYGPKISV 483

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
             +DAIGR WQ  T+Q+DFNLP RF+  Y  +   +  PVMIHRA+FGSIERF G++ E+
Sbjct: 484 QARDAIGRTWQMSTVQLDFNLPERFDLEYTAADGSRQRPVMIHRALFGSIERFFGVLTEH 543

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  P+WLSP+Q +   +  +  EY   + + LK+  +  E D  +E +  KIR H+  
Sbjct: 544 YAGAFPVWLSPVQVVGIPVAEAYEEYLGGVVDQLKALGVRAELDASSERMQKKIRTHTKS 603

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           KIP  +I G+++ +  SI  R    +    + + DAI  +T
Sbjct: 604 KIPFQLIAGEQDQAAGSISFRFRDGSQENGIPIADAIARIT 644


>gi|111224550|ref|YP_715344.1| threonyl-tRNA synthetase [Frankia alni ACN14a]
 gi|111152082|emb|CAJ63808.1| Threonyl-tRNA synthetase (Threonine--tRNA ligase) [Frankia alni
           ACN14a]
          Length = 692

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 253/665 (38%), Positives = 379/665 (56%), Gaps = 44/665 (6%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI-EI 61
           SD+++T       +  V  TG+  A+  +    +  +A  ++G+  DL+  + +G++ E 
Sbjct: 30  SDVRVTVQHAQRSDPRVVPTGTTAADLFADD--RDVIAALVDGQQRDLAHVLDDGAVVEP 87

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           I    P   A++RHS AH++A+AVQ ++P+ ++ IGP I++GFYYDFD E PF+ ++L  
Sbjct: 88  IAIGSPAGRAIVRHSAAHVVAQAVQDLFPKARLGIGPPIDNGFYYDFDVETPFTPEDLKA 147

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL------------------E 163
           IEKK Q II     F ++ ++ E+AR   E   E YK+E++                   
Sbjct: 148 IEKKAQAIIKAGQRFSRRVVTEEQARA--ELAAEPYKIELIGLKSSAGEDAEAEADAEAA 205

Query: 164 SIPAKENVTLY-----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPM 216
                  +T+Y     + GE  W DLCRGPHV ST  +  F  +++ A AYWRG    P 
Sbjct: 206 VEVGAGELTIYDNLDAKTGELCWKDLCRGPHVPSTRSIPAF-AILRSAAAYWRGSEKNPQ 264

Query: 217 LSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKI 275
           L RIYGTAW ++  L  Y   L E+EKRDHR+L  E+DLF    E G G+  +H KG  I
Sbjct: 265 LQRIYGTAWESRDALKAYQTRLAEAEKRDHRRLGAELDLFSFPTEIGPGLAVFHPKGGAI 324

Query: 276 FQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
              +  Y RR+ I+  Y  +NTP +    L++ SGH D +   M+     D        +
Sbjct: 325 RTAMEDYARRRHIEAGYSFVNTPHITKSDLYEISGHLDWFADGMYPPMELDGGTD----Y 380

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
            LKPMNCP H+ ++    +SYRELP+RL EFG+VYR E SG +HGL RVRG TQDDAH+F
Sbjct: 381 YLKPMNCPMHILIYRSRGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRVRGLTQDDAHLF 440

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE-KRVGSDALWDDAENIMKGVLD 453
           C +EQ+  E   + N ++ + +D+G     ++LST+PE K VG+DA W++A  +++    
Sbjct: 441 CAREQLPAELDSVLNFVLGLLRDYGLSDFYLELSTKPEGKAVGTDAEWEEATELLRAA-- 498

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS 513
               + +  +   +  G GAFYGPK     +DAIGR WQ  TIQVDF LP RF+  Y  +
Sbjct: 499 ----AQKQDLELVLDAGGGAFYGPKISVQARDAIGRTWQLSTIQVDFQLPQRFDLEYQAA 554

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIAN 573
              +  P MIHRA+FG+IERF+ I++E++ G LP WL+P+QAI   IT   V Y   +A 
Sbjct: 555 DGTRQRPFMIHRALFGTIERFLAILLEHYAGALPPWLAPVQAIGIPITDEHVPYLDGVAA 614

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            L +H + +E D  ++ +  KIR    +K+P +++ GD++ ++ ++  R    T    V 
Sbjct: 615 KLSAHGVRVEVDSSDDRMQKKIRTAQKQKVPFMLLAGDEDVAKGAVSFRFRDGTQRNGVP 674

Query: 634 LLDAI 638
           + DA+
Sbjct: 675 VDDAV 679


>gi|312139482|ref|YP_004006818.1| threonine-tRNA ligase thrs [Rhodococcus equi 103S]
 gi|311888821|emb|CBH48133.1| threonine-tRNA ligase ThrS [Rhodococcus equi 103S]
          Length = 683

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 248/624 (39%), Positives = 373/624 (59%), Gaps = 38/624 (6%)

Query: 44  NGKVCDLS-DPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIED 102
           +G + DLS  P  +  +E +  +     +VIRHS AH++A+AVQ  +PE ++ IGP I+D
Sbjct: 45  DGNLKDLSWTPDVDVEVEAVAADTEDGRSVIRHSAAHVLAQAVQQEFPEAKLGIGPPIKD 104

Query: 103 GFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSH-EKARELFESKKEAYKVEI 161
           GFYYDF  E+PF+ ++LA++EK+M++I+     F ++ +   E AR   E   E +K+E+
Sbjct: 105 GFYYDFQVERPFTPEDLAKLEKRMKKIVKDAQRFSRRVVEDLEDART--ELANEPFKLEL 162

Query: 162 LESIPAKEN----------VTLY-----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVA 204
           ++     ++          +T+Y     R GE  W DLCRGPH+ +T  +  F K+ + +
Sbjct: 163 IDDKSGIDDPEVMEVGGGELTIYDNLNPRTGEVIWKDLCRGPHIPTTKYIPAF-KITRSS 221

Query: 205 GAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GS 263
            AYWRGD +R  L RIYGTAW + + L Q+L  L E+E+RDHRKL  E+DLF   ++ GS
Sbjct: 222 AAYWRGDQSREDLQRIYGTAWESTEALDQHLELLAEAERRDHRKLGAELDLFSFPDELGS 281

Query: 264 GVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK 322
           G+  +H KG  I Q + +Y R R +++ YE + +P +   HL++ SGH D Y+  MF   
Sbjct: 282 GLPVFHPKGGIIRQEMENYSRKRHVEEGYEFVYSPHITKGHLYEVSGHLDWYKDGMFPAM 341

Query: 323 CADDTIKDLRT-------FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
             D+ + +  T       + LKPMNCP H  VF    +SYRELP+RL EFGSVYR E SG
Sbjct: 342 HIDEELNEDGTVRKPGQDYYLKPMNCPMHNLVFGSRGRSYRELPLRLFEFGSVYRYEKSG 401

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR-PEKR 434
            +HGL RVRG TQDDAH++CTKEQM +E       ++ + KD+G +   ++LST+ P+K 
Sbjct: 402 VVHGLTRVRGMTQDDAHIYCTKEQMRDELTTTLKFVLGLLKDYGLDDFYLELSTKNPDKF 461

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           VG DALW++A   ++ V           +N     G  AFYGPK    ++DA+GR WQ  
Sbjct: 462 VGDDALWEEATETLREV------GEASGLNLVPDPGGAAFYGPKISVQVQDALGRSWQMS 515

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQ 554
           TIQ+DFNLP RF+  Y  S   K  PVMIHRA+FGSIERF G++ E++ G  P WL+P+Q
Sbjct: 516 TIQLDFNLPERFDLEYTGSDGTKQRPVMIHRALFGSIERFFGVLTEHYAGAFPAWLAPVQ 575

Query: 555 AIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
            +   +  +  ++  ++   LK+  +  E D  ++ +  KIR H+ +K+P +++ G+++ 
Sbjct: 576 VVGIPVAEAFEDHLFDVVKQLKAAGVRAEVDVSDDRMQKKIRNHTTQKVPFMLLAGERDV 635

Query: 615 SERSIGIRRFGSTTTQKVSLLDAI 638
              ++  R    T    V + DA+
Sbjct: 636 EAGAVSFRFRDGTQVNGVPVADAV 659


>gi|183601640|ref|ZP_02963010.1| threonyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           HN019]
 gi|219683826|ref|YP_002470209.1| threonyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           AD011]
 gi|241190862|ref|YP_002968256.1| threonyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           Bl-04]
 gi|241196268|ref|YP_002969823.1| threonyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           DSM 10140]
 gi|254783508|sp|B8DUF4|SYT_BIFA0 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|183219246|gb|EDT89887.1| threonyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           HN019]
 gi|219621476|gb|ACL29633.1| threonyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           AD011]
 gi|240249254|gb|ACS46194.1| threonyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           Bl-04]
 gi|240250822|gb|ACS47761.1| threonyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           DSM 10140]
 gi|289178601|gb|ADC85847.1| Threonyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           BB-12]
 gi|295793851|gb|ADG33386.1| threonyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           V9]
          Length = 692

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 254/633 (40%), Positives = 368/633 (58%), Gaps = 43/633 (6%)

Query: 36  KKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           K  +AV +NG++ DL  P+ +G ++E +T + P    ++RHS  H+MA+AVQ + P+ ++
Sbjct: 31  KNIIAVRLNGELRDLYTPLHDGDNVESVTLDSPDGTGIMRHSATHVMAQAVQEVRPDAKL 90

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKAR------- 147
            IGP+IE+GFYYDFD + PF+ D+L  IEK MQ II     F ++ +S E+A        
Sbjct: 91  GIGPVIENGFYYDFDVKDPFTPDDLKTIEKHMQRIIKSAQRFQRRVVSEEEALREEADEP 150

Query: 148 ---ELFESKKEAYKVEILESIPAKENVTLY----RQGE--WFDLCRGPHVRSTGQVKKFF 198
              EL + K++A + E    I  KE +++Y    R+G   W DLCRGPH+ +T  +K F 
Sbjct: 151 YKIELIKDKEDALETEAAVDISHKE-LSMYDNLDREGNVVWSDLCRGPHLPNTRYIKAF- 208

Query: 199 KLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI 258
           KL + A AYW+G    PML RIYG A+ T+ EL  Y   +EE+ KRDHRKL +EMDLF  
Sbjct: 209 KLERAAAAYWKGSEANPMLQRIYGVAFPTKDELKAYQTRMEEAAKRDHRKLGQEMDLFSF 268

Query: 259 AED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
            ++ G G+  +H KG  I   +  Y R    K+ Y  + TP +    L++ SGH   Y+ 
Sbjct: 269 PDEIGPGLAVFHPKGAAIINAMEDYSREMHRKNHYSFVQTPHITKGGLYETSGHLQWYKD 328

Query: 317 NMFAVKCAD-------DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVY 369
            M+     D       + +K    + LKPMNCP H  +F    +SYRELP+RL EFG+VY
Sbjct: 329 GMYPPMHLDEEKDENGNIVKQGFDYYLKPMNCPMHNLIFKSRQRSYRELPLRLFEFGTVY 388

Query: 370 RNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
           R E SG +HGL RVRG TQDD+H++CT+EQM +E   + N ++ + KD+G     ++LST
Sbjct: 389 RYEKSGVVHGLTRVRGLTQDDSHIYCTREQMKDELKNLLNFVLKVLKDYGLNDFYLELST 448

Query: 430 RPE-KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIG 488
           + E K VGSD +W++A N +  V      + +  +      G  AFYGPK     +DAIG
Sbjct: 449 KDEHKFVGSDEIWEEATNTLAEV------AEESGLELVADPGGAAFYGPKISVQARDAIG 502

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPL 548
           R WQ  TIQ+DFNLP RF   Y+        PVMIHRA+FGSIERF  I++E++ G  P 
Sbjct: 503 RTWQVSTIQLDFNLPERFQLEYIAPDGSHQRPVMIHRALFGSIERFFAILLEHYAGAFPA 562

Query: 549 WLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIII 608
           WL+P+QA+   +      +  +  N L+   + +ETD  ++    KIR  S  K+P III
Sbjct: 563 WLAPVQALGVPVADEFAPHLDKFMNSLEEDLVRVETDNSDDRFGKKIRNASKSKVPYIII 622

Query: 609 CGDKEASERSIGIR-RFGSTTTQKVSLLDAIPI 640
            G+++ +  ++  R R GS        L+ +P+
Sbjct: 623 AGEEDMNNNAVSFRFRDGSQ-------LNGVPV 648


>gi|119963884|ref|YP_948047.1| threonyl-tRNA synthetase [Arthrobacter aurescens TC1]
 gi|166223318|sp|A1R735|SYT_ARTAT RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|119950743|gb|ABM09654.1| threonyl-tRNA synthetase [Arthrobacter aurescens TC1]
          Length = 669

 Score =  471 bits (1213), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 252/638 (39%), Positives = 371/638 (58%), Gaps = 47/638 (7%)

Query: 36  KKAVAVAINGKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           +  V   +NG + DL   + EG+ +E +T + P  L V+RHS AH+MA+AVQ + PE ++
Sbjct: 32  RDVVVARVNGVLKDLDQVLTEGADVEGVTIDSPDGLNVLRHSTAHVMAQAVQQLRPEAKL 91

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            IGP I DGFY+DFD   PF+ ++L  +EK MQ+II ++  F+++ ++ E+ARE   +  
Sbjct: 92  GIGPYITDGFYFDFDVADPFTPEDLRTLEKMMQKIINQNQKFVRRVVTEEEAREAMAN-- 149

Query: 155 EAYKVEIL----ESIPAKENV---------TLY-----RQGE--WFDLCRGPHVRSTGQV 194
           E YK+E+L    ++  A E V         T+Y     + GE  W DLCRGPH+++T  +
Sbjct: 150 EPYKLELLGKKNDASDAAEGVNVEVGAGDITIYDNVDRKSGESIWCDLCRGPHLQNTKII 209

Query: 195 KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMD 254
              F L + + AYW G+ N   L RIYGTAW T++ L  Y   + E+E+RDHRKL  E+D
Sbjct: 210 SNAFALTRSSAAYWLGNQNNQQLQRIYGTAWPTKEALKAYQERIAEAERRDHRKLGVELD 269

Query: 255 LFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWD 312
           LF   ++ GSG+  +H KG  I + +  Y R R +   YE + TP +   HL++ SGH D
Sbjct: 270 LFSFPDELGSGLPVFHPKGGIIRKAMEDYSRQRHVDAGYEFVYTPHITKGHLYEVSGHLD 329

Query: 313 SYRANMFAVKCADDTI-------KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEF 365
            Y+  MF     D          K  + + LKPMNCP H  +F    +SYRELP+RL EF
Sbjct: 330 WYKDGMFPAMQVDAEFNEDGSVRKPAQDYYLKPMNCPMHNLIFRSRGRSYRELPLRLFEF 389

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
           GSVYR E SG +HGL RVRG TQDDAH++CT+EQM +E     N ++ + KD+G +   +
Sbjct: 390 GSVYRYEKSGVVHGLTRVRGMTQDDAHIYCTREQMKDELTTTLNFVLGLLKDYGLDDFYL 449

Query: 426 KLSTRPEKR-VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL----GEGAFYGPKFE 480
           +LST+ E++ VG DA W++A   +  V +           +G+ L    G  AFYGPK  
Sbjct: 450 ELSTKNEEKFVGDDAAWEEATRTLSEVAEA----------SGLHLVPDPGGAAFYGPKIS 499

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
              KDA+GR WQ  TIQ+DFNLP RF   Y  +   +  PVMIHRA+FGS+ERF+G++ E
Sbjct: 500 VQAKDALGRTWQMSTIQLDFNLPERFELEYQAADGTRQRPVMIHRALFGSVERFMGVLTE 559

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           ++ G  P WL+P+Q +   +  +  +Y  ++   LK+  +  E D  ++    KIR  S 
Sbjct: 560 HYAGAFPAWLAPVQVVGIPVAETFNDYMFDVVGQLKAAGIRAEVDISSDRFPKKIRTASK 619

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
            KIP ++I G ++A   ++  R    +    V + +A+
Sbjct: 620 DKIPFVLIAGGEDAEAGAVSFRFRDGSQDNGVPVAEAV 657


>gi|261337772|ref|ZP_05965656.1| threonine--tRNA ligase [Bifidobacterium gallicum DSM 20093]
 gi|270277225|gb|EFA23079.1| threonine--tRNA ligase [Bifidobacterium gallicum DSM 20093]
          Length = 681

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 263/660 (39%), Positives = 374/660 (56%), Gaps = 41/660 (6%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI-EIIT 63
           I LT  DG  K      TG ++      S  K  +AV +NG+  DL  P+ +G I E I 
Sbjct: 6   ISLTI-DGEQKEVDAGLTGVELF-----SDNKDIIAVRLNGEPRDLYTPLNDGDIVESIM 59

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            + P  LA++RHS  H+MA+AVQ + P+ ++ IGP+IE+GFYYDFD E+PF+ D+L  IE
Sbjct: 60  LDSPDGLAIMRHSATHVMAQAVQELRPDAKLGIGPVIENGFYYDFDVEEPFTPDDLKTIE 119

Query: 124 KKMQEIIARDSPFLKQYLSHEKAR----------ELFESKKEAYKVEILESIPAKENVTL 173
           K MQ II     F ++ ++ ++A           EL E K+ A   E  + I  KE ++ 
Sbjct: 120 KTMQRIIKSSQRFQRRVVTEQEALDAEADQPYKIELIEDKEAALDTEAAQDISHKE-LSF 178

Query: 174 Y----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNT 227
           Y    R+G   W DLCRGPH+ +T  +K F KL + A AYW+G    PML RIYG A+ T
Sbjct: 179 YDNIDREGNVVWTDLCRGPHLPNTRFIKAF-KLERAAAAYWKGSEANPMLQRIYGVAFAT 237

Query: 228 QQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-R 285
           + EL  Y   +EE+ KRDHRKL +EMDLF   ++ G G+  +H KG  I   +  Y R  
Sbjct: 238 KDELKAYQQRMEEAAKRDHRKLGQEMDLFSFPDEIGPGLAVFHPKGAAIINAMEDYSRDM 297

Query: 286 KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD-------DTIKDLRTFALKP 338
             +  Y  + TP +    L++ SGH   Y+  M+     D       + +K    + LKP
Sbjct: 298 HRRHHYSFVQTPHITKGKLYETSGHLQWYKDGMYPAMHLDEEKDAEGNIVKQGFDYYLKP 357

Query: 339 MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE 398
           MNCP H  +F    +SYRELP+RL EFG+VYR E SG +HGL RVRG TQDD+H++CT+E
Sbjct: 358 MNCPMHNLIFKSRQRSYRELPLRLFEFGTVYRYEKSGVVHGLTRVRGLTQDDSHIYCTRE 417

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE-KRVGSDALWDDAENIMKGVLDTIKN 457
           QM +E   +   ++ + KD+G     ++LST+ E K VGSD +W++A N +  V    K+
Sbjct: 418 QMKDELKNLLQFVLKLLKDYGLNDFYLELSTKDEHKFVGSDEIWEEATNTLAEV---AKD 474

Query: 458 SSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK 517
           S  + +      G  AFYGPK     +DAIGR WQ  TIQ+DFNLP RF   Y+      
Sbjct: 475 SGLELVADP---GGAAFYGPKISVQARDAIGRTWQVSTIQLDFNLPERFGLEYIAKDGTH 531

Query: 518 CHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKS 577
             PVMIHRA+FGSIERF  I++E++ G LP W++P+QA+   +      + Q   + L+ 
Sbjct: 532 QRPVMIHRALFGSIERFFAILLEHYAGALPAWIAPVQALGVPVADEFAPHLQRFMDSLEE 591

Query: 578 HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
             + +E D  ++    KIR  S  K+P I+I G+++ S  ++  R    +    V + DA
Sbjct: 592 DLVRVEIDLSDDRFGKKIRNASKSKVPFILIVGEEDMSNNAVSFRFRDGSQLNGVPVDDA 651


>gi|209526622|ref|ZP_03275147.1| threonyl-tRNA synthetase [Arthrospira maxima CS-328]
 gi|209492990|gb|EDZ93320.1| threonyl-tRNA synthetase [Arthrospira maxima CS-328]
          Length = 604

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 237/561 (42%), Positives = 352/561 (62%), Gaps = 20/561 (3%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           L  IRH+ +H+MA AV  ++P+ QV IGP IE+GFYYDFD  +PF+  +L  I+K+M +I
Sbjct: 27  LKRIRHTTSHVMAMAVHKLFPKAQVTIGPWIENGFYYDFDSPEPFTEQDLKAIKKEMVKI 86

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG-EWFDLCRGPHV 188
           + R  P +++ +S E+A+   E+  E YK+EIL  +   E +T+Y  G +W+DLC GPHV
Sbjct: 87  LKRKLPVIREEVSREEAQRRIETLGEPYKLEILADL--TEPITIYHLGDQWWDLCAGPHV 144

Query: 189 RSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHR 247
            +TG +  K  +L  VAGAYWRGD  +  L RIYGTAW T ++L +Y    EE+ +RDHR
Sbjct: 145 ETTGDINPKAIELESVAGAYWRGDETKAQLQRIYGTAWETPEQLAEYKRRKEEALRRDHR 204

Query: 248 KLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLW 305
           +L +E+ LF  ++  G G+  W  KG  +  TL  +++R +++  Y+ + TP +   +L+
Sbjct: 205 RLGKELGLFIFSDQVGPGLPLWTPKGTILRTTLEDFLKREQVRRGYQPVVTPHLGRVNLF 264

Query: 306 QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEF 365
           + SGHW  YR ++F +    +       F LK MNCP HV ++   L+SYRELP+RLAEF
Sbjct: 265 KTSGHWQKYREDLFPMMGESED----EGFVLKAMNCPFHVQIYKSSLRSYRELPIRLAEF 320

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK-IM 424
           G+VYR E SG L GL RVRGFTQDDAH+F T EQ+ +E LK+ +LI S+ K    ++   
Sbjct: 321 GTVYRYEQSGELGGLTRVRGFTQDDAHLFVTPEQLDDEFLKVVDLIQSVLKKLKLDQSFK 380

Query: 425 VKLSTR---PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            +LS R    +K +GSD  W+ AEN ++  ++T+       +N    +GE AFYGPK ++
Sbjct: 381 ARLSFRDPNSDKYIGSDQAWEKAENAIRRAVETLG------MNYFEGIGEAAFYGPKLDF 434

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
           I++DA+ R+WQ GT+QVD+NLP RF+  YV     +  PVMIHRA FGS+ER IGI+IE 
Sbjct: 435 IVQDALEREWQLGTVQVDYNLPERFDLEYVAEDGTRQRPVMIHRAPFGSLERLIGILIEE 494

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G+ PLWL+P+   +  ++     + + +A   +S  +  E D  ++ +   IR     
Sbjct: 495 YTGDFPLWLAPVMVRLLPVSDEFFPFVESVAEKWRSLDIRAEADHSHDRLGKMIRNAEKA 554

Query: 602 KIPIIIICGDKEASERSIGIR 622
           K+P++ + G KE    S+ IR
Sbjct: 555 KVPVMAVVGAKEVESNSLSIR 575


>gi|319957838|ref|YP_004169101.1| ser-tRNA(thr) hydrolase ;threonyl-tRNA synthetase [Nitratifractor
           salsuginis DSM 16511]
 gi|319420242|gb|ADV47352.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Nitratifractor
           salsuginis DSM 16511]
          Length = 605

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 245/591 (41%), Positives = 369/591 (62%), Gaps = 19/591 (3%)

Query: 56  EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFS 115
           EG  EI     P +L +IRHS AH+MA+A++ ++P+ Q  +GP++++GFYYDF   +   
Sbjct: 26  EGCREIFFDNSPEALEIIRHSTAHLMAQAIRELYPDAQFFVGPVVDEGFYYDFRTSEKIG 85

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            ++L +IEKKM+E++ +  P  K  +S  +A E F  K +  K  +L++IP+ E V++YR
Sbjct: 86  EEDLKKIEKKMKELVKKKLPIEKYEISKAEAVEKF--KNDDLKQAVLKNIPS-ETVSIYR 142

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
           QG++ DLCRGPHV +T  +  F KL +VAGAY  GD N  ML+RIYG A+  ++ L ++ 
Sbjct: 143 QGDFEDLCRGPHVPNTRFLHNF-KLTRVAGAYLGGDENAEMLTRIYGIAFADKESLKKWQ 201

Query: 236 YFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEE 293
             +EE+++RDHRKL  E++LF   E+ G+G+ FW  KG ++   L   + R   +  YE 
Sbjct: 202 QMMEEAKRRDHRKLGTELELFMFNEEAGAGLPFWLPKGARLRSKLEQILWRSHRRRGYEP 261

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           +  P++L   +W+ SGH+  Y  NM+  +       D + + LKPMNC GH+ +F +  K
Sbjct: 262 VRGPEILKADMWRTSGHYACYGENMYLTEI------DGQEYGLKPMNCIGHILIFKNSTK 315

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYR+LP++  E+G V+R+E SG LHGL+RVR FTQDDAH+FCT EQ+    L++   + +
Sbjct: 316 SYRDLPLKYFEYGVVHRHEKSGVLHGLLRVREFTQDDAHIFCTPEQIKPVVLEVVEFVDA 375

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           + K FGFE  M ++ST+PEK +G D +W+ A   +K  LD      ++ +  G+  G GA
Sbjct: 376 VMKKFGFEYTM-EISTKPEKAIGDDEVWEVATQALKDALD------ENGLEYGIDEGGGA 428

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  + DAIGR WQCGT+QVDFNLP RF+  YV   + +  PVMIHRA+ GS ER
Sbjct: 429 FYGPKIDVKITDAIGRKWQCGTVQVDFNLPERFDVEYVAEDNTRKRPVMIHRAILGSFER 488

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           FI I+ E++ G  P +++P Q I   I +    YA+E+A  L    +  E   RN+++N 
Sbjct: 489 FIAILTEHYAGEFPFFIAPTQVIFVPIAAEHTAYAKELAEALMEREIDSEIYDRNDSLNK 548

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +IR    +K+P ++I GD+E   RS+ +R         +S  D +  L+KE
Sbjct: 549 RIRLAEKQKVPYVVIVGDEEVKNRSVAVRDRRKKEQYNLSADDFMLQLSKE 599


>gi|281357061|ref|ZP_06243551.1| threonyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548]
 gi|281316619|gb|EFB00643.1| threonyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548]
          Length = 591

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 230/555 (41%), Positives = 345/555 (62%), Gaps = 14/555 (2%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           L  IRHS AH+MA AVQ ++P+ +  IGP  E+GFYYDFD E    +++L  IEK M+++
Sbjct: 21  LETIRHSAAHVMAAAVQQLYPDAKFDIGPSTENGFYYDFDMEHRLVTEDLKAIEKAMKKL 80

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
           I R  PF    ++   A ++     + YK+E L  IP    +T Y+ G++ DLCRGPHV 
Sbjct: 81  IGRKLPFECFEMNRADAEKMLSEAGQTYKLERLADIPEDAKITFYKTGDFVDLCRGPHVA 140

Query: 190 STGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKL 249
           ++G++    KL+ +AG+Y+RGD    ML RIYGTA+ ++++L  YL   EE+ KRDHRKL
Sbjct: 141 NSGEIGAV-KLLSIAGSYFRGDEKNKMLQRIYGTAFASEEDLQAYLKQQEEAAKRDHRKL 199

Query: 250 AREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQ 307
             E+DLF  +++ G G++ WH KG  I  T  ++ + +  K+ YE + TP +    LW+ 
Sbjct: 200 GVELDLFSFSDNVGPGLVLWHPKGAFIRHTFETFWKEEHYKNGYELLYTPHIGQSVLWET 259

Query: 308 SGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGS 367
           SGH   Y+  M++    D+     + + +KPMNCP H+ V+   L+SYRELP+R AE G+
Sbjct: 260 SGHLSFYKDGMYSPMQIDE-----KDYYVKPMNCPFHIEVYQSRLRSYRELPLRWAELGT 314

Query: 368 VYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKL 427
           VYR E SG+LHGL+RVRGFTQDD+H+ CT EQ+ +E  ++    + I+K FGF +I   L
Sbjct: 315 VYRYEKSGALHGLLRVRGFTQDDSHIICTPEQIEDEIAEVLRFSLYIWKSFGFTEIKPYL 374

Query: 428 STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAI 487
           STRP K VG    W+ A   ++  +D +       +   V  G GAFYGPK +  +KDAI
Sbjct: 375 STRPAKAVGEPERWEKALVSLRKAIDKLG------LECEVDEGGGAFYGPKIDLKVKDAI 428

Query: 488 GRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           GR+WQ  TIQ DFNLP RF+  Y+    +K  P M+HRA+ GS+ERF GI+IE + G  P
Sbjct: 429 GREWQTATIQFDFNLPERFDMTYIGEDGKKHRPYMVHRALMGSLERFFGILIEQYAGAFP 488

Query: 548 LWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIII 607
           LWL+P QA +  ++    + A  +   L+     +E D +  ++  KI++   ++IP ++
Sbjct: 489 LWLAPEQARILPVSDRQHDAAMALKKELRLKGFRVEVDVKAASLGAKIKDARKERIPYML 548

Query: 608 ICGDKEASERSIGIR 622
           + G++EA++ ++ +R
Sbjct: 549 VVGEREAADGTMAVR 563


>gi|282898730|ref|ZP_06306717.1| Threonyl-tRNA synthetase, class IIa [Cylindrospermopsis raciborskii
           CS-505]
 gi|281196257|gb|EFA71167.1| Threonyl-tRNA synthetase, class IIa [Cylindrospermopsis raciborskii
           CS-505]
          Length = 610

 Score =  471 bits (1211), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 240/579 (41%), Positives = 353/579 (60%), Gaps = 21/579 (3%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           L  IRH+ +HIMA AVQ ++P+ QV IGP IE+GFYYDFD  +PFS  +L  I+K+M +I
Sbjct: 28  LKKIRHTASHIMAMAVQKLFPKAQVTIGPWIENGFYYDFDNPEPFSDKDLKAIQKEMVKI 87

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG-EWFDLCRGPHV 188
           I R  P +++ +S E+A++  E  +E YK+EIL  I  +E +T+Y  G EW+DLC GPH+
Sbjct: 88  INRKLPVIREEVSREEAKKRIEKIQEPYKLEILADI-KQEPITIYHLGDEWWDLCAGPHL 146

Query: 189 RSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHR 247
            +T  +  K  +L  VAGAYWRGD  +  L RIY TAW T ++L +Y    EE+ +RDHR
Sbjct: 147 ENTKDINPKAIELESVAGAYWRGDETKAQLQRIYATAWQTPEQLGEYKRRKEEALRRDHR 206

Query: 248 KLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLW 305
           K+ +E+ LF  ++  G G+  W  KG  +   L  ++++ ++K  Y  + TP +    L+
Sbjct: 207 KIGKELGLFIFSDPVGPGLPLWTPKGTLLRSILEDFLKKEQLKRGYLPVVTPHIARVDLF 266

Query: 306 QQSGHWDSYRANMFAVKCADDTIKDL-RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           + SGHW  Y+ +MF +   ++  K L + F LKPMNCP H+ ++   L+SYRELP+RLAE
Sbjct: 267 KTSGHWQKYKEDMFPMMAENEESKALDQGFVLKPMNCPFHIQIYKSELRSYRELPMRLAE 326

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FG+VYR E SG L GL RVRGFT DD+H+F T EQ+  E L + +LI+++++    +   
Sbjct: 327 FGTVYRYEQSGELGGLTRVRGFTVDDSHLFVTPEQLDEEFLNVVDLILTVFRRLQLKNFK 386

Query: 425 VKLSTR---PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            +LS R    +K +G D +WD AE  ++  +  +     + I      GE AFYGPK ++
Sbjct: 387 ARLSFRDPTSDKYIGGDEVWDKAEGAIRRAVQQLGMDHFEGI------GEAAFYGPKLDF 440

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
           I  D + R+WQ GT+QVD+NLP RF+  YV     +  PVMIHRA FGS+ER IGI+IE 
Sbjct: 441 IFSDVLEREWQLGTVQVDYNLPERFDLEYVAEDGSRKRPVMIHRAPFGSLERLIGILIEE 500

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G+ PLWL+PIQ  +  +    +E+ +E+A  +    +  + D   + +   IR     
Sbjct: 501 YAGDFPLWLAPIQIRLLPVGEQQIEFTKEVAGKMTELGIRAQADLSGDRLAKLIRNGEKD 560

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
           KIP++ + G KE    S+ IR      T+    L  IP+
Sbjct: 561 KIPVMAVVGAKEVESNSLSIR------TRASGELGVIPV 593


>gi|289580635|ref|YP_003479101.1| threonyl-tRNA synthetase [Natrialba magadii ATCC 43099]
 gi|289530188|gb|ADD04539.1| threonyl-tRNA synthetase [Natrialba magadii ATCC 43099]
          Length = 650

 Score =  471 bits (1211), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 259/628 (41%), Positives = 373/628 (59%), Gaps = 24/628 (3%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IE 60
           P+ + +  PDGS  +    AT  D A  I   L +  VA  ++G +     P  +G+ +E
Sbjct: 10  PAQLTVVLPDGSELHVDEGATVEDCAYEIGPGLGRDTVAGKLDGDLVAKEQPAYDGAELE 69

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           IIT +    LAV+RHS +H +A+AV+  + +V +AIGP  ++GFYYDFD       D+LA
Sbjct: 70  IITDQSEEYLAVMRHSASHCLAQAVERHYDDVDLAIGPPTDEGFYYDFDN-LDIDEDDLA 128

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEW 179
            +E ++ +I+  D    ++ +S E+A E      E YK+E+L E     E VT Y QGEW
Sbjct: 129 ALESEIADIVDEDYEIEREEVSIEEAEERL--ADEPYKLELLSEFADENEQVTFYTQGEW 186

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLC GPHV STG++    KL+++AGAYWRGD   PM +RIYGTA+  + +L  +L   +
Sbjct: 187 EDLCAGPHVDSTGEIGPV-KLLEIAGAYWRGDEENPMQTRIYGTAFEDESDLENFLERKQ 245

Query: 240 ESEKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           E+EKRDHR++  EM+LF I +  G G+  +H  G  + + L  ++    KD  Y+ + TP
Sbjct: 246 EAEKRDHRRIGNEMNLFSIQDVTGPGLPLYHPPGKTVLKELEDFVEDLNKDAGYDYVETP 305

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            V    LW +SGH+++Y+ +MF     DD       F LKPMNCPGH A+F     SYR+
Sbjct: 306 HVFKTDLWHRSGHYENYQDDMFIFNVGDDE------FGLKPMNCPGHAAIFQDQSWSYRD 359

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R AE G VYR E  G L GL RV  FT DD H+F   +Q+  E  +I ++II + + 
Sbjct: 360 LPIRYAENGKVYRKEQRGELSGLSRVWAFTIDDGHLFIRPDQIEQEVEEIMDMIIDVLET 419

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           F  E  M  L+TRPEK VGSD +W+ AE  ++ VL+  +N   D     +  G+GAFYGP
Sbjct: 420 FDLEYEMA-LATRPEKSVGSDEIWEHAEEQLETVLEK-RNLEYD-----IEEGDGAFYGP 472

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K ++  +DAIGR W   T+Q+DFN+P RF+  YV   +E+  PVMIHRA++GS ERF  +
Sbjct: 473 KIDFAFEDAIGRAWDGPTVQLDFNMPDRFDLSYVGEDNEEHEPVMIHRALYGSYERFFMM 532

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE+++G  P WL+P Q  V  I+ + + YA ++AN        +E D R+ T+  KIR 
Sbjct: 533 LIEHYEGKFPFWLAPEQVRVLPISDANLGYAYQVANEFDD--FRVEVDDRDSTLERKIRA 590

Query: 598 HSIKKIPIIIICGDKEASERSIGIR-RF 624
               ++P  II GD E  + +I +R RF
Sbjct: 591 AHDDRVPYQIIVGDNEEEDGNISVRDRF 618


>gi|294628375|ref|ZP_06706935.1| threonyl-tRNA synthetase [Streptomyces sp. e14]
 gi|292831708|gb|EFF90057.1| threonyl-tRNA synthetase [Streptomyces sp. e14]
          Length = 659

 Score =  471 bits (1211), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 259/653 (39%), Positives = 384/653 (58%), Gaps = 48/653 (7%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           SD+++     S +      TG+  A+  +    +  VA  + G++ DL+  V++G ++E 
Sbjct: 2   SDVRVIIQRDSEREERTVTTGTTAADLFAGE--RTVVAARVGGELKDLAYEVKDGETVEG 59

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +       L ++RHS AH+MA+AVQ I+PE ++ IGP I DGFYYDFD ++PF+ ++L +
Sbjct: 60  VEISSEDGLNILRHSTAHVMAQAVQEIFPEAKLGIGPPIRDGFYYDFDVKEPFTPEDLKR 119

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL--------------ESIPA 167
           IEK+MQEI  R   F ++  + + AR   E   E YK+E++                + +
Sbjct: 120 IEKRMQEIQKRGQKFSRRVTTDDDAR--VELADEPYKLELIGLKGNAAQAADGADAEVGS 177

Query: 168 KENVTLY-----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRI 220
            E +T+Y     + G+  W DLCRGPH+ +T  +  F KLM+ A AYWRG    P L RI
Sbjct: 178 GE-LTIYDNLDAKTGDLCWKDLCRGPHLPTTRNIPAF-KLMRSAAAYWRGSEKNPQLQRI 235

Query: 221 YGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTL 279
           YGTAW ++ EL QYL FL E+EKRDHRKL  E+DLF   ++ G G+  +H KG  + + +
Sbjct: 236 YGTAWPSKDELKQYLDFLAEAEKRDHRKLGAELDLFSFPDELGPGLAVFHPKGGVVRKVM 295

Query: 280 ISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKP 338
             Y RR+ +   YE +NTP +  +HL++ SGH   Y   MF     D+     + + LK 
Sbjct: 296 EDYSRRRHEVSGYEFVNTPHISKEHLFEISGHLPHYAEGMFPPIQFDE-----QNYRLKA 350

Query: 339 MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE 398
           MNCP H  +F    +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDD+H++CTKE
Sbjct: 351 MNCPMHNLIFKSRGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRSRGFTQDDSHIYCTKE 410

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLSTR--PEKRVGSDALWDDAENIMKGVLDTIK 456
           QM  E   +   ++ + +D+G  +  ++LSTR   +K +GSD  W +A   ++       
Sbjct: 411 QMPQELDTLLTFVLDLLRDYGLTEFELELSTRDDSDKFIGSDEDWAEATEALR------- 463

Query: 457 NSSQDRINTGVLL--GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH 514
             + ++ N  ++   G  A+YGPK    ++DAIGR WQ  TIQVDFN P RFN  Y  + 
Sbjct: 464 -QAAEKQNLPLVPDPGGAAYYGPKISVQVRDAIGRSWQMSTIQVDFNQPKRFNLEYTAAD 522

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANL 574
             +  PVMIHRA+FGSIERF G+++E++ G  P WL+P+QA+   +  + V Y ++ A  
Sbjct: 523 GSRRQPVMIHRALFGSIERFFGVLLEHYAGAFPAWLAPVQAVGIPVGDAHVGYLEKFALE 582

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR-RFGS 626
            KS  L +E D  ++ +  KIR    +K+P +II GD + +  ++  R R GS
Sbjct: 583 AKSKGLRVEVDASSDRMQKKIRNAQKQKVPFMIIVGDDDMNAGTVSFRYRDGS 635


>gi|86149734|ref|ZP_01067964.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|85840002|gb|EAQ57261.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CF93-6]
          Length = 602

 Score =  471 bits (1211), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 250/617 (40%), Positives = 380/617 (61%), Gaps = 24/617 (3%)

Query: 34  LAKKAVAVAINGKVCDLSDPVREGSI-EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEV 92
           + K+ +A   N  + D S  V+  ++ EI       SL VIRHSCAH+MA+A++S++PE 
Sbjct: 1   MEKEVIAYLDNETIID-SQSVKNTNLKEIYFDNSKESLEVIRHSCAHLMAQAIKSLYPEA 59

Query: 93  QVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFES 152
           +  +GP+IEDGFYYDF  E     ++L +IEKKM+E+        K  ++  +A   F++
Sbjct: 60  KFFVGPVIEDGFYYDFRVESKIGEEDLVKIEKKMKELAEAKIEISKYEITKSEALAKFQN 119

Query: 153 KKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDS 212
             +  K E+L  IP +  V++Y+QGE+ DLCRGPHV +T +  +FFKL +VAGAY  GD 
Sbjct: 120 --DDLKQEVLLRIPDR-AVSIYKQGEFEDLCRGPHVPNT-KFLRFFKLTRVAGAYLGGDE 175

Query: 213 NRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRK 271
            R ML+RIYGTA+  ++ L +YL  +EE++KRDHRKL  E+ LF   ++ G G+  W   
Sbjct: 176 KREMLTRIYGTAFADKESLKEYLTIIEEAKKRDHRKLGTELKLFTFDDEIGGGLPIWLSN 235

Query: 272 GWKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
           G ++ ++ + +M  KI     YE +  P++L    W+ SGH+ +Y+ NM+  +       
Sbjct: 236 GARL-RSKLEHMLYKIHRLRGYEPVRGPELLKADAWKISGHYANYKENMYFTQI------ 288

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
           D + + +KPMNC GH+ ++   ++SYR+LP++  E+G V+R+E SG LHGL RVR FTQD
Sbjct: 289 DEQEYGIKPMNCVGHIKIYQSDVRSYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFTQD 348

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMK 449
           DAH+FC   Q+  + L+I   + ++ K F F   M ++ST+PEK +G D +W+ A   +K
Sbjct: 349 DAHIFCMPSQIKEQVLEILAFVDNLMKLFDFSYEM-EISTKPEKAIGDDEIWEIATKALK 407

Query: 450 GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAF 509
             LD      +  +  G+  G GAFYGPK +  + DA+ R WQCGTIQVDFNLPSRF   
Sbjct: 408 EALD------EQGLKYGIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDFNLPSRFKLE 461

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQ 569
           Y +S +EK  PVM+HRA+ GS ERFIGI+ E+  G  P +++P    +  I  + + YA+
Sbjct: 462 YTDSDNEKKQPVMLHRAILGSFERFIGILTEHCAGEFPFFIAPTAVGIVPIGEAHIAYAK 521

Query: 570 EIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           EI   L   ++  E   +NE+++ KIR    +K+P+I++ GD E ++RS+ +R   +   
Sbjct: 522 EIQKELLELNIDSEVYEKNESLSKKIRTAEKQKLPMILVLGDDEVAKRSVALRDRRAKEQ 581

Query: 630 QKVSLLDAIPILTKESL 646
           + +S LD    L KE +
Sbjct: 582 KNLS-LDEFIKLVKEKM 597


>gi|329767326|ref|ZP_08258851.1| threonyl-tRNA synthetase [Gemella haemolysans M341]
 gi|328836015|gb|EGF85706.1| threonyl-tRNA synthetase [Gemella haemolysans M341]
          Length = 647

 Score =  470 bits (1210), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 249/650 (38%), Positives = 398/650 (61%), Gaps = 26/650 (4%)

Query: 6   KLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITP 64
           KL FPDG+++ +  + T  ++AESIS SL KK ++  ++    +++ P+ ++G +++I  
Sbjct: 3   KLVFPDGNVREYD-NKTPLEIAESISVSLKKKVISAKLDEDYIEVNKPITKDGHLKLIVA 61

Query: 65  --EDPRSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
             ED  SL V+RH+CAH++A+A++ ++  +V   +GP I+ GFYYDFD E   S ++   
Sbjct: 62  DDEDKDSLYVLRHTCAHVLAQALRRLYGKDVHFGVGPAIDGGFYYDFDAEYKVSEEDFKA 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK++++II+ +     + +S E+A E+F  K++ YKVE++  +PA E +T+Y QG++ D
Sbjct: 122 IEKEVKKIISENHAIEGREVSKEEALEIF--KEDPYKVELINDLPADEVITVYTQGDFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG HV +T ++K+F KL+ VAGAYWRG+S+  ML RIYGTA+ T+  + Q+L  L+E+
Sbjct: 180 LCRGGHVSATSKIKEF-KLLSVAGAYWRGNSDNKMLQRIYGTAYFTKDHMEQHLVRLQEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
            +RDHRKL +E+ +F  ++  G+G+  W   G  I +T+  Y+  ++++  Y+ + TP +
Sbjct: 239 RERDHRKLGKELGIFTTSQKVGAGLPLWLPNGATIRRTIERYIVDKEVELGYDHVYTPIM 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             + L+  SGHWD Y+ +MF     D       T  L+PMNCP H+ V+ +   SYRELP
Sbjct: 299 GSKDLYITSGHWDHYQEDMFPPMEMDH-----ETMVLRPMNCPHHMMVYKNERHSYRELP 353

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG++ GL RVRG T +DAH+F   +Q+ +E      LI   YKD G
Sbjct: 354 IRIAELGMMHRYEASGAVSGLQRVRGMTLNDAHIFVRPDQLKDEFKLTVGLIEEAYKDLG 413

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
            +    +LS R     EK    DA+W++A+ ++K   D +     D +      GE AFY
Sbjct: 414 IKNFSYRLSYRDPENTEKYFDDDAMWNNAQQMLKETADEL---GLDYVEAE---GEAAFY 467

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  ++ AIG+     TIQ+DF LP RF   Y+    +   PV+IHR +  ++ER +
Sbjct: 468 GPKLDVQVETAIGKQETLSTIQLDFLLPERFELEYIGEDGKAHRPVVIHRGIVSTMERMV 527

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             ++E +KG+LP WLSP Q  +  + +    +Y++EI   LK   + +  D R+E + YK
Sbjct: 528 AFLLEEYKGDLPTWLSPNQVRIIPVNNDYHYDYSKEIMQELKKAGVKVAIDDRDEKLGYK 587

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IRE + KKIP  ++ GDKE   R++ +R FGS   ++ S  +    + KE
Sbjct: 588 IREAASKKIPYTLVIGDKEVENRNVNVRTFGSHDQKEESFAEFKENILKE 637


>gi|315930217|gb|EFV09332.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 305]
          Length = 602

 Score =  470 bits (1210), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 250/617 (40%), Positives = 381/617 (61%), Gaps = 24/617 (3%)

Query: 34  LAKKAVAVAINGKVCDLSDPVREGSI-EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEV 92
           + K+ +A   N  + D S  V+  ++ EI       SL VIRHSCAH+MA+A++S++PE 
Sbjct: 1   MEKEVIAYLDNETIID-SQSVKNTNLKEIYFDNSKESLEVIRHSCAHLMAQAIKSLYPEA 59

Query: 93  QVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFES 152
           +  +GP+IEDGFYYDF  E     ++L +IEKKM+E+        K  ++  +A   F++
Sbjct: 60  KFFVGPVIEDGFYYDFRVESKIGEEDLVKIEKKMKELAEAKIEISKYEITKSEALAKFQN 119

Query: 153 KKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDS 212
             +  K E+L  IP +  V++Y+QGE+ DLCRGPHV +T +  +FFKL +VAGAY  GD 
Sbjct: 120 --DDLKQEVLLRIPDR-AVSIYKQGEFEDLCRGPHVPNT-KFLRFFKLTRVAGAYLGGDE 175

Query: 213 NRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRK 271
            R ML+RIYGTA+  ++ L +YL  +EE++KRDHRKL  E+ LF   ++ G G+  W   
Sbjct: 176 KREMLTRIYGTAFADKESLKEYLTIIEEAKKRDHRKLGTELKLFTFDDEIGGGLPIWLSN 235

Query: 272 GWKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
           G ++ ++ + +M  KI     YE +  P++L    W+ SGH+ +Y+ NM+  +       
Sbjct: 236 GARL-RSKLEHMLYKIHRLRGYEPVRGPELLKADAWKISGHYANYKENMYFTQI------ 288

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
           D + + +KPMNC GH+ ++   ++SYR+LP++  E+G V+R+E SG LHGL RVR FTQD
Sbjct: 289 DEQEYGIKPMNCVGHIKIYQSDVRSYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFTQD 348

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMK 449
           DAH+FC   Q+  + L+I   + ++ K F F   M ++ST+PEK +G D +W+ A   +K
Sbjct: 349 DAHIFCMPSQIKEQVLEILAFVDNLMKLFDFSYEM-EISTKPEKAIGDDEIWEIATKALK 407

Query: 450 GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAF 509
             LD      +  +  G+  G GAFYGPK +  + DA+ R WQCGTIQVDFNLPSRF   
Sbjct: 408 EALD------EQGLKYGIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDFNLPSRFKLE 461

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQ 569
           Y +S +EK  PVM+HRA+ GS ERFIGI+ E+  G  P +++P    +  I  + ++YA+
Sbjct: 462 YTDSDNEKKQPVMLHRAILGSFERFIGILTEHCAGEFPFFIAPTAVGIVPIGEAHIDYAK 521

Query: 570 EIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           EI   L   ++  E   +NE+++ KIR    +K+P+I++ GD E ++RS+ +R   +   
Sbjct: 522 EIQKELLELNIDSEVYEKNESLSKKIRIAEKQKLPMILVLGDDEVAKRSVALRDRRAKEQ 581

Query: 630 QKVSLLDAIPILTKESL 646
           + +S LD    L KE +
Sbjct: 582 KNLS-LDEFIKLVKEKM 597


>gi|254423005|ref|ZP_05036723.1| threonyl-tRNA synthetase [Synechococcus sp. PCC 7335]
 gi|196190494|gb|EDX85458.1| threonyl-tRNA synthetase [Synechococcus sp. PCC 7335]
          Length = 618

 Score =  470 bits (1210), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 243/576 (42%), Positives = 357/576 (61%), Gaps = 21/576 (3%)

Query: 56  EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFS 115
           E  I+++  ++   L  IRH+ +H+MA AVQ ++P+ QV IGP I+ GFYYDFD  +PF+
Sbjct: 26  ETPIKLLRTDESEKLERIRHTFSHVMAMAVQRLFPKAQVTIGPSIDYGFYYDFDAPEPFT 85

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
             +L  I+K+M +II +  P +++ +S E+A+   E  KE YK+EILE +  +E +TLY 
Sbjct: 86  DKDLKSIKKEMVKIIKKGLPVIREEVSREEAKRRIEELKEPYKLEILERL--EEPITLYH 143

Query: 176 QG-EWFDLCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQ 233
            G +W+DLC GPH+ +T  +  K F+L  VAGAYWRGD  +  L RIYGTAW T +EL +
Sbjct: 144 LGDQWWDLCAGPHIETTKDLNPKAFELESVAGAYWRGDETKAQLQRIYGTAWETPEELKE 203

Query: 234 YLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDY 291
           Y    EE+++RDHRKL +E+ LF  +++ G G+  W  KG  +  TL  Y++  ++   Y
Sbjct: 204 YKRRKEEAKRRDHRKLGKELGLFIFSDEVGPGLPLWTPKGTVLRSTLEDYLKGEQVARGY 263

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
             + TP V    L++ SGHW  Y  ++F +    +       F LK MNCP HV ++   
Sbjct: 264 LPVVTPHVGRVDLFKTSGHWQKYSEDLFPMMGESED----EGFVLKAMNCPFHVQIYKSQ 319

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI 411
           L+SY+ELP+RLAEFG+VYR E SG L GL RVRGFTQDDAH+F T  Q+ +E LK+ +LI
Sbjct: 320 LRSYKELPIRLAEFGTVYRYEQSGELGGLTRVRGFTQDDAHLFVTPNQLNDEFLKVVDLI 379

Query: 412 ISIYKDFGFEK-IMVKLSTRPEKR----VGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
            +  K    ++    +LS R  K     +GSD  W+ A++ ++  ++T+     + I   
Sbjct: 380 QATLKVLQMDQSFRARLSFRDPKNKSKYIGSDEAWEKAQSAIRQAVETMGMDHFEGI--- 436

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
              GE AFYGPK ++I++DA+ R+WQ GT+QVD+NLP RFN  YV     +  P+MIHRA
Sbjct: 437 ---GEAAFYGPKLDFIVRDALDREWQLGTVQVDYNLPERFNLEYVAEDGSRQRPIMIHRA 493

Query: 527 VFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF 586
            FGS+ER IGI+IE + G+ PLWL+P Q  +  +  S  EYA+  A  ++     +E D 
Sbjct: 494 PFGSLERLIGILIEQYAGDFPLWLAPEQVRLLPVAESHWEYAERAAIDMRKLGARVEVDK 553

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
             E +   IR     KIP++ + GD+E ++ ++ IR
Sbjct: 554 SGERLGKMIRNSEKAKIPVMSVIGDQEVTDNTLSIR 589


>gi|86741833|ref|YP_482233.1| threonyl-tRNA synthetase [Frankia sp. CcI3]
 gi|86568695|gb|ABD12504.1| Ser-tRNA(Thr) hydrolase [Frankia sp. CcI3]
          Length = 701

 Score =  470 bits (1210), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 258/668 (38%), Positives = 380/668 (56%), Gaps = 47/668 (7%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI-EI 61
           SD+++T       +  V  TG+  AE  +    +  +A  ++G+  DL+  + +G + E 
Sbjct: 43  SDVRVTVQHAQRSDPRVVPTGTTAAELFADD--RNVIAALVDGQQRDLAHVLADGVVVEP 100

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           I  + P   A++RHS AH++A+AVQ ++P+ ++ IGP I+DGFYYDFD E PF+ D+L  
Sbjct: 101 IMIDSPAGRAIVRHSTAHVVAQAVQELFPKARLGIGPPIDDGFYYDFDVESPFTPDDLRA 160

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL---ESIPAKEN-------- 170
           IEK+ Q II     F ++ ++  +AR   E   E YK+E++    S  A ++        
Sbjct: 161 IEKRAQAIIRAGQRFSRRVVTEPEARA--ELADEPYKIELIGLKSSDTAADDAEASVEVG 218

Query: 171 ---VTLY-----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRI 220
              +T+Y     + GE  W DLCRGPHV +T  +  F  +++ A AYWRG    P L RI
Sbjct: 219 AGELTIYDNLDAKTGELCWKDLCRGPHVPTTRAIPAF-AILRSAAAYWRGSEKNPQLQRI 277

Query: 221 YGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTL 279
           YGTAW ++  L  Y   L E+EKRDHRKL  E+DLF    E G G+  +H +G  I   +
Sbjct: 278 YGTAWESRDALKAYQTRLAEAEKRDHRKLGAELDLFSFPTEIGPGLAVFHPRGGAIRTAM 337

Query: 280 ISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKP 338
             Y RR+ I+  Y  +NTP +    L+Q SGH D +   M+     D        + LKP
Sbjct: 338 EDYSRRRHIEAGYSFVNTPHITKSELYQISGHLDWFAEGMYPPMQLDGGTD----YYLKP 393

Query: 339 MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE 398
           MNCP H+ +F    +SYRELP+RL EFG+VYR E SG +HGL RVRG TQDDAH+FC +E
Sbjct: 394 MNCPMHILIFRSRGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRVRGLTQDDAHLFCARE 453

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE-KRVGSDALWDDAENIMKGVLDTIKN 457
           Q+  E   +   ++ + +DFG     ++LSTRP  K VG+D  W  A  +++      + 
Sbjct: 454 QLPTELDSVLTFVLGLLRDFGLTDFYLELSTRPAGKAVGTDEEWAQATELLR------EA 507

Query: 458 SSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK 517
           + +  +   +  G GAFYGPK     +DAIGR WQ  TIQVDF LP RF   Y  +   +
Sbjct: 508 AQKQDLELVMDPGGGAFYGPKISVQARDAIGRTWQLSTIQVDFQLPRRFGLEYQAADGTR 567

Query: 518 CHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKS 577
             P MIHRA+FG+IERF  I++E++ G LP WL+P+Q +   IT   V Y  E+A  L +
Sbjct: 568 QRPFMIHRALFGTIERFFAILLEHYAGALPPWLAPVQVVGIPITDEHVPYLDEVARRLAA 627

Query: 578 HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSI------GIRRFGSTTTQK 631
           H L +E D  ++ +  KIR    +K+P +++ GD + ++ ++      G +R G    + 
Sbjct: 628 HGLRVEVDSSDDRMQKKIRTAQKQKVPFMLLAGDSDVAQGAVSFRFRDGTQRNGVPVDEA 687

Query: 632 VS-LLDAI 638
           V+ +LDA+
Sbjct: 688 VAEILDAV 695


>gi|116670864|ref|YP_831797.1| threonyl-tRNA synthetase [Arthrobacter sp. FB24]
 gi|166223319|sp|A0JXC7|SYT_ARTS2 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|116610973|gb|ABK03697.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Arthrobacter
           sp. FB24]
          Length = 669

 Score =  470 bits (1210), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 252/638 (39%), Positives = 371/638 (58%), Gaps = 47/638 (7%)

Query: 36  KKAVAVAINGKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           +  V   +NG++ DL  P+ EG+ IE +T + P  L V+RHS AH+MA+AVQ + P+ ++
Sbjct: 32  RDVVVARVNGELKDLDQPLPEGADIEGVTIDSPDGLNVLRHSTAHVMAQAVQQLRPDAKL 91

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            IGP I DGFY+DFD  +PF+ ++L  +EK M +II ++  F+++ +S ++ARE    K 
Sbjct: 92  GIGPYITDGFYFDFDVAEPFTPEDLKALEKMMLKIINQNQKFVRRVVSEDEAREAM--KN 149

Query: 155 EAYKVEIL----ESIPAKENV---------TLY-----RQGE--WFDLCRGPHVRSTGQV 194
           E YK+E+L     +  A E V         T+Y     + G+  W DLCRGPH+ +T  +
Sbjct: 150 EPYKLELLGKKNNAADAGEGVNVEVGAGDITIYDNVDRKSGDSVWCDLCRGPHLPNTKLI 209

Query: 195 KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMD 254
              F L + + AYW G+ N   L RIYGTAW T+  L  Y   + E+E+RDHRKL  E+D
Sbjct: 210 SNAFALTRSSAAYWLGNQNNQQLQRIYGTAWPTKDALKAYQERIAEAERRDHRKLGAELD 269

Query: 255 LFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWD 312
           LF   ++ GSG+  +H KG  I + +  Y R R +   Y+ + TP +   HL++ SGH D
Sbjct: 270 LFSFPDELGSGLPVFHPKGGIIRKAMEDYSRQRHVDAGYDFVYTPHITKGHLYEVSGHLD 329

Query: 313 SYRANMFAVKCADDTIKDLRT-------FALKPMNCPGHVAVFNHGLKSYRELPVRLAEF 365
            Y+  MF     D  + +  T       + LKPMNCP H  +F    +SYRELP+RL EF
Sbjct: 330 WYKEGMFPAMHIDAELNEDGTVRKPGQDYYLKPMNCPMHNLIFRSRGRSYRELPLRLFEF 389

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
           GSVYR E SG +HGL RVRG TQDDAH++CT+EQM +E     N ++ + KD+G +   +
Sbjct: 390 GSVYRYEKSGVVHGLTRVRGMTQDDAHIYCTREQMKDELTTTLNFVLGLLKDYGLDDFYL 449

Query: 426 KLSTRPE-KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL----GEGAFYGPKFE 480
           +LST+ E K VG DA WD+A   +  V +           +G+ L    G  AFYGPK  
Sbjct: 450 ELSTKNEDKFVGDDATWDEATRTLAEVAEA----------SGLELIPDPGGAAFYGPKIS 499

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
              KDA+GR WQ  TIQ+DFNLP RF   +  +   +  PVMIHRA+FGS+ERF+G++ E
Sbjct: 500 VQAKDALGRTWQMSTIQLDFNLPERFELEFQAADGTRQRPVMIHRALFGSVERFMGVLTE 559

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           ++ G  P WL+P+Q +   +  +  +Y  ++ + LK+  +  E D  ++    KIR  S 
Sbjct: 560 HYAGAFPAWLAPVQVVGIPVAEAFNDYMFDVVDQLKAVGIRAEVDISSDRFPKKIRTASK 619

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
            KIP ++I G ++A   ++  R    +    V + +A+
Sbjct: 620 DKIPFVLIAGGEDAEAGAVSFRFRDGSQDNGVPVAEAV 657


>gi|86153772|ref|ZP_01071975.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           HB93-13]
 gi|85842733|gb|EAQ59945.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           HB93-13]
          Length = 602

 Score =  470 bits (1209), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 251/617 (40%), Positives = 380/617 (61%), Gaps = 24/617 (3%)

Query: 34  LAKKAVAVAINGKVCDLSDPVREGSI-EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEV 92
           + K+ +A   N  + D S  V+  ++ EI       SL VIRHSCAH+MA+A++S++PE 
Sbjct: 1   MEKEVIAYLDNETIID-SQSVKNTNLKEIYFDNSKESLEVIRHSCAHLMAQAIKSLYPEA 59

Query: 93  QVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFES 152
           +  +GP+IEDGFYYDF  E     ++L +IEKKM+E+       LK  ++  +A   F++
Sbjct: 60  KFFVGPVIEDGFYYDFRVESKIGEEDLVKIEKKMKELAEAKIEILKYEITKNEALAKFQN 119

Query: 153 KKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDS 212
             +  K E+L  IP    V++Y+QGE+ DLCRGPHV +T +  +FFKL +VAGAY  GD 
Sbjct: 120 --DDLKQEVLLRIPDG-AVSIYKQGEFEDLCRGPHVPNT-KFLRFFKLTRVAGAYLGGDE 175

Query: 213 NRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRK 271
            R ML+RIYGTA+  ++ L +YL  +EE++KRDHRKL  E+ LF   ++ G G+  W   
Sbjct: 176 KREMLTRIYGTAFADKESLKEYLTIIEEAKKRDHRKLGTELKLFTFDDEIGGGLPIWLSN 235

Query: 272 GWKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
           G ++ ++ + +M  KI     YE +  P++L    W+ SGH+ +Y+ NM+  +       
Sbjct: 236 GARL-RSKLEHMLYKIHRLRGYEPVRGPELLKADAWKISGHYANYKENMYFTQI------ 288

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
           D + + +KPMNC GH+ ++   ++SYR+LP++  E+G V+R+E SG LHGL RVR FTQD
Sbjct: 289 DEQEYGIKPMNCVGHIKIYQSDVRSYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFTQD 348

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMK 449
           DAH+FC   Q+  + L+I   + ++ K F F   M ++ST+PEK +G D +W+ A   +K
Sbjct: 349 DAHIFCMPSQIKEQVLEILAFVDNLMKLFDFSYEM-EISTKPEKAIGDDEIWEIATKALK 407

Query: 450 GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAF 509
             LD      +  +  G+  G GAFYGPK +  + DA+ R WQCGTIQVDFNLPSRF   
Sbjct: 408 EALD------KQGLKYGIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDFNLPSRFKLE 461

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQ 569
           Y +S +EK  PVM+HRA+ GS ERFIGI+ E+  G  P +++P    +  I  + + YA+
Sbjct: 462 YTDSDNEKKQPVMLHRAILGSFERFIGILTEHCAGEFPFFIAPTAVGIVPIGEAHIAYAK 521

Query: 570 EIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           EI   L   ++  E   +NE+++ KIR    +K+P+I++ GD E ++RS+ +R   +   
Sbjct: 522 EIQKELLELNIDSEVYEKNESLSKKIRIAEKQKLPMILVLGDDEVAKRSVALRDRRAKEQ 581

Query: 630 QKVSLLDAIPILTKESL 646
           + +S LD    L KE +
Sbjct: 582 KNLS-LDEFIKLVKEKM 597


>gi|291450340|ref|ZP_06589730.1| threonyl-tRNA synthetase [Streptomyces albus J1074]
 gi|291353289|gb|EFE80191.1| threonyl-tRNA synthetase [Streptomyces albus J1074]
          Length = 660

 Score =  470 bits (1209), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 264/672 (39%), Positives = 384/672 (57%), Gaps = 56/672 (8%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           SD+++     S +   V  TG+  A+  +    +  +A  ++G++ DL+    +G S+E 
Sbjct: 2   SDVRVIIQRDSEREERVVTTGTTAADLFAGE--RTVIAARVDGELKDLAYVPGDGESVEP 59

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +       L ++RHS AH+MA+AVQ ++PE ++ IGP ++ GFYYDFD  +PF+ ++L +
Sbjct: 60  VDISSGDGLDILRHSTAHVMAQAVQELFPEAKLGIGPPVKGGFYYDFDVAEPFTPEDLKR 119

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN----------- 170
           +EKKMQEI  R   F ++  + E AR   E   E YK+E+   I  K N           
Sbjct: 120 VEKKMQEIQKRGQRFSRRVTTDEDARA--ELAGEPYKLEL---IGLKGNAAQAADGADAE 174

Query: 171 -----VTLY-----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLS 218
                +T+Y     + GE  W DLCRGPH+ +T  +  F KLM+ A AYWRG    P L 
Sbjct: 175 VGGGELTIYDNLDAKTGELCWKDLCRGPHLPTTRNIPAF-KLMRSAAAYWRGSEKNPQLQ 233

Query: 219 RIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQ 277
           RIYGTAW +++EL  +L FL E+EKRDHRKL  E+DLF   ++ G G+  +H KG  + +
Sbjct: 234 RIYGTAWPSKEELKAHLEFLAEAEKRDHRKLGTELDLFSFPDELGPGLAVFHPKGGVVRK 293

Query: 278 TLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFAL 336
            + +Y RR+ +D  YE +NTP +  +HL++ SGH  +Y   MF     D      + + L
Sbjct: 294 EMENYSRRRHEDAGYEFVNTPHISKEHLFETSGHLPNYSEGMFPPIEFDG-----QNYRL 348

Query: 337 KPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT 396
           K MNCP H  +F    +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDD+H++CT
Sbjct: 349 KAMNCPMHNLIFKGRGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRSRGFTQDDSHIYCT 408

Query: 397 KEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR-PE--KRVGSDALWDDAENIMKGVLD 453
           KEQM  E   +   ++ + +D+G  +  ++LSTR PE  K +G DA W++A   ++    
Sbjct: 409 KEQMPEELDSLLTFVLDLLRDYGLNQFELELSTRDPESDKFIGEDAEWEEATEALR---- 464

Query: 454 TIKNSSQDRINTGVLL----GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAF 509
                 Q     G+ L    G  A+YGPK     KDAIGR WQ  TIQVDF  P RF   
Sbjct: 465 ------QAAEKQGLPLVPDPGGAAYYGPKISVQAKDAIGRSWQMSTIQVDFQQPKRFGLE 518

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQ 569
           Y  +   +  PVMIHRA+FGSIERF  +++E++ G  P WL+P+QA+   I  + V Y Q
Sbjct: 519 YTAADGSRQQPVMIHRALFGSIERFFAVLLEHYAGAFPAWLAPVQAVGIPIGDAHVSYLQ 578

Query: 570 EIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           E A   K+  L +E D  ++ +  KIR H   K+P +II GD++ +  ++  R    +  
Sbjct: 579 EFAADAKARGLRVEVDSSSDRMQKKIRNHQKAKVPFMIIVGDEDMNAGTVSFRYRDGSQE 638

Query: 630 QKVSLLDAIPIL 641
             +   DA+  L
Sbjct: 639 NGIPREDALAKL 650


>gi|88597312|ref|ZP_01100547.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 84-25]
 gi|218561885|ref|YP_002343664.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|73919778|sp|Q9PIS3|SYT_CAMJE RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|88190373|gb|EAQ94347.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 84-25]
 gi|112359591|emb|CAL34375.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|284925497|gb|ADC27849.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           IA3902]
 gi|315928137|gb|EFV07455.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           DFVF1099]
          Length = 602

 Score =  469 bits (1208), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 250/617 (40%), Positives = 380/617 (61%), Gaps = 24/617 (3%)

Query: 34  LAKKAVAVAINGKVCDLSDPVREGSI-EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEV 92
           + K+ +A   N  + D S  V+  ++ EI       SL VIRHSCAH+MA+A++S++PE 
Sbjct: 1   MEKEVIAYLDNETIID-SQSVKNTNLKEIYFDNSKESLEVIRHSCAHLMAQAIKSLYPEA 59

Query: 93  QVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFES 152
           +  +GP+IEDGFYYDF  E     ++L +IEKKM+E+        K  ++  +A   F++
Sbjct: 60  KFFVGPVIEDGFYYDFRVESKIGEEDLVKIEKKMKELAEAKIEISKYEITKSEALAKFQN 119

Query: 153 KKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDS 212
             +  K E+L  IP +  V++Y+QGE+ DLCRGPHV +T +  +FFKL +VAGAY  GD 
Sbjct: 120 --DDLKQEVLLRIPDR-AVSIYKQGEFEDLCRGPHVPNT-KFLRFFKLTRVAGAYLGGDE 175

Query: 213 NRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRK 271
            R ML+RIYGTA+  ++ L +YL  +EE++KRDHRKL  E+ LF   ++ G G+  W   
Sbjct: 176 KREMLTRIYGTAFADKESLKEYLTIIEEAKKRDHRKLGTELKLFTFDDEIGGGLPIWLSN 235

Query: 272 GWKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
           G ++ ++ + +M  KI     YE +  P++L    W+ SGH+ +Y+ NM+  +       
Sbjct: 236 GARL-RSKLEHMLYKIHRLRGYEPVRGPELLKADAWKISGHYANYKENMYFTQI------ 288

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
           D + + +KPMNC GH+ ++   ++SYR+LP++  E+G V+R+E SG LHGL RVR FTQD
Sbjct: 289 DEQEYGIKPMNCVGHIKIYQSDVRSYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFTQD 348

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMK 449
           DAH+FC   Q+  + L+I   + ++ K F F   M ++ST+PEK +G D +W+ A   +K
Sbjct: 349 DAHIFCMPSQIKEQVLEILAFVDNLMKLFDFSYEM-EISTKPEKAIGDDEIWEIATKALK 407

Query: 450 GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAF 509
             LD      +  +  G+  G GAFYGPK +  + DA+ R WQCGTIQVDFNLPSRF   
Sbjct: 408 EALD------EQGLKYGIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDFNLPSRFKLE 461

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQ 569
           Y +S +EK  PVM+HRA+ GS ERFIGI+ E+  G  P +++P    +  I  + + YA+
Sbjct: 462 YTDSDNEKKQPVMLHRAILGSFERFIGILTEHCAGEFPFFIAPTAVGIVPIGEAHIAYAK 521

Query: 570 EIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           EI   L   ++  E   +NE+++ KIR    +K+P+I++ GD E ++RS+ +R   +   
Sbjct: 522 EIQKELLELNIDSEVYEKNESLSKKIRIAEKQKLPMILVLGDDEVAKRSVALRDRRAKEQ 581

Query: 630 QKVSLLDAIPILTKESL 646
           + +S LD    L KE +
Sbjct: 582 KNLS-LDEFIKLVKEKM 597


>gi|271967410|ref|YP_003341606.1| threonyl-tRNA synthetase [Streptosporangium roseum DSM 43021]
 gi|270510585|gb|ACZ88863.1| threonyl-tRNA synthetase [Streptosporangium roseum DSM 43021]
          Length = 659

 Score =  469 bits (1208), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 254/650 (39%), Positives = 379/650 (58%), Gaps = 50/650 (7%)

Query: 19  VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSC 77
           V A G+   E++ ++  +  VA   NG++ DL+  V EG  +E +    P   A++RHS 
Sbjct: 17  VVAEGTTYGEAL-QADGRSVVAARANGELRDLAARVAEGDEVEPVEVGSPDGRAIVRHST 75

Query: 78  AHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFL 137
           AH+MA+AVQ ++PE ++ IGP +++GFYYDFD + PF+ ++L ++EK+M+EI+ +   F 
Sbjct: 76  AHVMAQAVQELFPEAKLGIGPPVDNGFYYDFDVKNPFTPEDLKRVEKRMREIVKQGQIFS 135

Query: 138 KQYLSHEKARELFESKKEAYKVEILE--------------SIPAKENVTLY-----RQGE 178
           ++ +S E A E  E   E YK+E++                +   E +T+Y     + G+
Sbjct: 136 RRPVSDEDALE--ELAAEPYKLELIGLKGGAGAQADGADVEVGGAE-LTIYDNLDPKTGD 192

Query: 179 --WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
             W DLCRGPHV +T  +  F KLM+  GAYWRG    P L RIYGTAW ++ +  +YL+
Sbjct: 193 LCWKDLCRGPHVPTTRSIPAF-KLMRSGGAYWRGSEKNPQLQRIYGTAWESRDKQDEYLH 251

Query: 237 FLEESEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEI 294
            LEE+EKRDHR+L  E+DLF   +E GSG+  +H KG  I + +  YMRR+  +  YE +
Sbjct: 252 MLEEAEKRDHRRLGAELDLFSFPSELGSGLPVFHPKGGIIRKEMEDYMRRRQGEAGYEFV 311

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
           NTP +    L++ SGH   Y  +MF     +        + +KPMNCP H  +F    +S
Sbjct: 312 NTPHITKSQLFETSGHLPWYAEDMFPPFELEGV-----EYRVKPMNCPMHNLIFRARGRS 366

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YRELP+RL EFGSVYR E SG +HGL RVRG TQDD+H++CT+EQM  E   +   ++S+
Sbjct: 367 YRELPLRLCEFGSVYRYEKSGVVHGLTRVRGMTQDDSHIYCTREQMVGEIKSLLTFVLSV 426

Query: 415 YKDFGFEKIMVKLSTR--PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL--- 469
            +DFG  +  ++LSTR   +K +G  A WD+A + ++          Q  + +G+ L   
Sbjct: 427 LRDFGLSEFYLELSTRDDSDKFIGDPADWDEATDALR----------QTALESGLELVDD 476

Query: 470 -GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
            G  AFYGPK     KDAIGR WQ  TIQ+D N P RF   Y  +   +  PVMIHRA+F
Sbjct: 477 PGGAAFYGPKISVQAKDAIGRTWQLSTIQLDLNQPKRFELEYQAADGSRQTPVMIHRALF 536

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRN 588
           GSIERF+G++ E++ G  P WL+P+Q +   I  +   Y Q++A   +   + IE D  +
Sbjct: 537 GSIERFLGVLTEHYAGAFPPWLAPVQVVGIPIAEAHASYLQDVAKRARERGIRIEVDASD 596

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           + +  KIR     K+P +++ GD++ +  ++  R         V + +AI
Sbjct: 597 DRMQKKIRNAQKSKVPFMLLAGDEDIANGAVSFRFRNGEQKNGVPVDEAI 646


>gi|124010058|ref|ZP_01694720.1| threonyl-tRNA synthetase [Microscilla marina ATCC 23134]
 gi|123983945|gb|EAY24340.1| threonyl-tRNA synthetase [Microscilla marina ATCC 23134]
          Length = 578

 Score =  469 bits (1208), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 248/588 (42%), Positives = 363/588 (61%), Gaps = 21/588 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEI 61
           S+IK+T PDGS++ +P   TG +VA SIS  LA+  +   +NG+V + S P+ E  ++ +
Sbjct: 2   SNIKITLPDGSVREYPAGTTGHEVALSISEGLARNVLTAKVNGEVWESSRPIHEDATVSL 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSDELA 120
           +T +D        HS AH++AEAV++++P  +  IGP IE G FYYD D       +E A
Sbjct: 62  LTWKDEDGKQAFWHSSAHLLAEAVEALYPGTKFGIGPSIESGGFYYDIDTGDDVVINEEA 121

Query: 121 --QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
             +IE KM E+  + + F ++ +S  +A E F  K + YK+E+++ +     +T Y QG 
Sbjct: 122 FPKIEAKMLELAKQKNEFARKEVSKAEAIEYFTEKGDEYKLELIDRL-EDGTITFYTQGN 180

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + DLCRG H+ STG +K   KL  VAGAYW G ++R  L+RIYG  +  Q+EL ++L  L
Sbjct: 181 FTDLCRGGHIPSTGLIKAA-KLTNVAGAYWLGQTDRKQLTRIYGITFPKQKELKEHLALL 239

Query: 239 EESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINT 296
           EE++KRDHRKL +E++LF  +E  G G+  W  KG  + + L ++MRR +IK  Y  + T
Sbjct: 240 EEAKKRDHRKLGKELELFTFSERVGKGLPLWLPKGALLRERLENFMRRAQIKAGYSPVVT 299

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +  + L++ SGHW+ Y  + F       T ++   F LKPMNCP H  ++    +SY+
Sbjct: 300 PHIGSKKLYETSGHWEKYGEDSFQPIA---TPQEGEEFMLKPMNCPHHCEIYASKPRSYK 356

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +LP+RLAEFG+VYR E SG LHGL RVRGFTQDDAH+FCT  Q+  E  K+ +L++ ++ 
Sbjct: 357 DLPLRLAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCTPAQVKEEFGKVIDLVLYVFS 416

Query: 417 DFGFEKIMVKLSTR-PE---KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
             GFE    ++S R PE   K  G D  W+ AE  +      I  ++Q  + T   LGE 
Sbjct: 417 ALGFEDYTAQISLRDPENKSKYFGKDEDWEQAEQAI------IDVAAQKGLQTVTELGEA 470

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           AFYGPK ++++KDA+ R WQ GT+Q+D+ LP RF   Y  S +E+  PVMIHRA FGS+E
Sbjct: 471 AFYGPKLDFMVKDALKRKWQLGTVQLDYQLPDRFELEYTGSDNERHRPVMIHRAPFGSLE 530

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHL 580
           RFI ++ E+  G  PLWL+P Q  +  I+    +YAQE+   L+ + +
Sbjct: 531 RFIAVLTEHCAGKFPLWLAPEQIAILPISQKFHDYAQEVYAQLEENDI 578


>gi|283955362|ref|ZP_06372861.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414]
 gi|283793122|gb|EFC31892.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414]
          Length = 602

 Score =  469 bits (1207), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 248/617 (40%), Positives = 381/617 (61%), Gaps = 24/617 (3%)

Query: 34  LAKKAVAVAINGKVCDLSDPVREGSI-EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEV 92
           + K+ +A   N  + D S  V+  ++ EI       SL VIRHSCAH+MA+A+++++PE 
Sbjct: 1   MEKEVIAYLDNETIID-SQSVKNTNLKEIYFDNSKESLEVIRHSCAHLMAQAIKNLYPEA 59

Query: 93  QVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFES 152
           +  +GP+IEDGFYYDF  E     ++L +IEKKM+E++       K  ++  +A   F++
Sbjct: 60  KFFVGPVIEDGFYYDFRVESKIGEEDLVKIEKKMKELVEAKIVISKYEITKNEALAKFQN 119

Query: 153 KKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDS 212
             +  K E+L  IP    V++Y+QGE+ DLCRGPHV +T +  +FFKL +VAGAY  GD 
Sbjct: 120 --DDLKQEVLSRIPDG-TVSIYKQGEFEDLCRGPHVPNT-KFLRFFKLTRVAGAYLGGDE 175

Query: 213 NRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRK 271
            R ML+RIYGTA+  ++ L +YL  +EE++KRDHRKL  E+ LF   ++ G G+  W   
Sbjct: 176 KREMLTRIYGTAFADKESLKEYLTIIEEAKKRDHRKLGAELKLFTFDDEIGGGLPIWLSN 235

Query: 272 GWKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
           G ++ ++ + +M  KI     YE +  P++L    W+ SGH+ +Y+ NM+  +       
Sbjct: 236 GARL-RSKLEHMLYKIHRLRGYEPVRGPELLKADAWKISGHYANYKENMYFTQI------ 288

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
           D + + +KPMNC GH+ ++   ++SYR+LP++  E+G V+R+E SG LHGL RVR FTQD
Sbjct: 289 DEQEYGIKPMNCVGHIKIYQSNVRSYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFTQD 348

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMK 449
           DAH+FC   Q+  + L+I   + ++ K F F   M ++ST+PEK +G D +W+ A   +K
Sbjct: 349 DAHIFCMPSQIKEQVLEILAFVDNLMKLFDFSYEM-EISTKPEKAIGDDEIWEVATKALK 407

Query: 450 GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAF 509
             LD      +  +  G+  G GAFYGPK +  + DA+ R WQCGTIQVDFNLP+RF   
Sbjct: 408 EALD------EQGLKYGIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDFNLPNRFKLE 461

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQ 569
           Y +S++EK  PVM+HRA+ GS ERFIGI+ E+  G  P +++P    +  I  + + YA+
Sbjct: 462 YTDSNNEKKQPVMLHRAILGSFERFIGILTEHCAGEFPFFIAPTAIGIVPIGEAHIAYAK 521

Query: 570 EIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           EI   L   ++  E   +NE+++ KIR    +K+P+I++ GD E ++RS+ +R   +   
Sbjct: 522 EIQKELLKFNIDSEVYEKNESLSKKIRIAEKQKLPMILVLGDDEVAKRSVALRDRRAKEQ 581

Query: 630 QKVSLLDAIPILTKESL 646
           + +S LD    L KE +
Sbjct: 582 KNLS-LDEFIKLVKEKM 597


>gi|241889888|ref|ZP_04777186.1| threonyl-tRNA synthetase [Gemella haemolysans ATCC 10379]
 gi|241863510|gb|EER67894.1| threonyl-tRNA synthetase [Gemella haemolysans ATCC 10379]
          Length = 647

 Score =  469 bits (1207), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 246/640 (38%), Positives = 395/640 (61%), Gaps = 26/640 (4%)

Query: 6   KLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITP 64
           KL FPDG+++ +  + T  ++AESIS SL KK ++  ++    +++ P+ ++G +++I  
Sbjct: 3   KLVFPDGNVREYD-NKTPLEIAESISVSLKKKVISAKLDEDYIEVNKPITKDGHLKLIVA 61

Query: 65  --EDPRSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
             ED  SL V+RH+CAH++A+A++ ++  +V   +GP I+ GFYYDFD E   S ++   
Sbjct: 62  DDEDKDSLYVLRHTCAHVLAQALRRLYGKDVHFGVGPAIDGGFYYDFDAEYKVSEEDFKA 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK++++II+ +     + +S E+A E+F  K++ YKVE++  +PA E +T+Y QG++ D
Sbjct: 122 IEKEVKKIISENYAIEGREVSKEEALEIF--KEDPYKVELINDLPADEVITVYTQGDFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG H+ +T ++K+F KL+ VAGAYWRG+S+  ML RIYGTA+ T++ L Q+L  L+E+
Sbjct: 180 LCRGGHLSATSKIKEF-KLLSVAGAYWRGNSDNKMLQRIYGTAYFTKEHLEQHLVRLQEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
            +RDHRKL +E+ +F  ++  G+G+  W   G  I +T+  Y+  ++++  Y+ + TP +
Sbjct: 239 RERDHRKLGKELGIFTTSQKVGAGLPLWLPNGATIRRTIERYIVDKEVELGYDHVYTPIM 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             + L+  SGHW+ Y+ +MF     D       T  L+PMNCP H+ V+ +   SYRELP
Sbjct: 299 GSKDLYITSGHWEHYQEDMFPPMEMDH-----ETMVLRPMNCPHHMMVYKNERHSYRELP 353

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG++ GL RVRG T +DAH+F   +Q+ +E      LI   YKD G
Sbjct: 354 IRIAELGMMHRYEASGAVSGLQRVRGMTLNDAHIFVRPDQLKDEFKLTVGLIEEAYKDLG 413

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
            +    +LS R     EK    DA+W++A+ ++K   D +     D +      GE AFY
Sbjct: 414 IKNFSYRLSYRDPENTEKYFDDDAMWNNAQQMLKETADEL---GLDYVEAE---GEAAFY 467

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  ++ AIG+     TIQ+DF LP RF   Y+    +   PV+IHR +  ++ER +
Sbjct: 468 GPKLDVQVETAIGKQETLSTIQLDFLLPERFELEYIGEDGKAHRPVVIHRGIVSTMERMV 527

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             ++E +KG+LP WLSP Q  +  + +    +Y++EI   LK   + +  D R+E + YK
Sbjct: 528 AFLLEEYKGDLPTWLSPNQVRIIPVNNDYHYDYSKEIMQELKKAGVKVAIDDRDEKLGYK 587

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           IRE + KKIP  ++ GDKE   R++ +R FGS   ++ S 
Sbjct: 588 IREAASKKIPYTLVIGDKEVENRNVNVRTFGSLNQKEESF 627


>gi|254456980|ref|ZP_05070408.1| threonyl-tRNA synthetase [Campylobacterales bacterium GD 1]
 gi|207085772|gb|EDZ63056.1| threonyl-tRNA synthetase [Campylobacterales bacterium GD 1]
          Length = 602

 Score =  469 bits (1207), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 241/589 (40%), Positives = 368/589 (62%), Gaps = 21/589 (3%)

Query: 38  AVAVAINGKVCDLSDPVREG--SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVA 95
           A+A+  NG++ DL      G    +I       SL V+RHS AH+MA+AV+S++P+ +  
Sbjct: 3   AIAIKHNGEIIDLQTAKELGFEGEQIHLDNSSDSLEVLRHSTAHLMAQAVKSLYPDAKFY 62

Query: 96  IGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKE 155
           +GP +++GFYYDF  E      +L  IEK+M     +     K  +S ++A+E F  K +
Sbjct: 63  VGPTVKEGFYYDFKTESEVGEGDLKNIEKQMLSFAKKKYEIEKYEISMDEAKEKF--KDD 120

Query: 156 AYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRP 215
             K+ ++E IP  + VT+Y+QGE+ DLCRGPH+ + G ++ +FKL+K+AGAY  GDS   
Sbjct: 121 HLKLSVMERIPG-DRVTIYKQGEFEDLCRGPHLPNIGLIR-YFKLLKIAGAYLGGDSKNE 178

Query: 216 MLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWK 274
           +L+RIYG A+  ++ L+ ++  L E+EKRDHRK+  EM+LF   E+ G+G   W   G +
Sbjct: 179 VLTRIYGIAFADKESLSAHMTMLAEAEKRDHRKIGNEMNLFTFREEVGAGFPIWLPAGGR 238

Query: 275 IFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           +   L S + +   K  YE +  P++L   LW+ SGH+ +Y  NM+  K  D        
Sbjct: 239 LRARLESLLYKAHRKRGYEPVRGPEMLRSDLWKTSGHYQNYGENMYFTKIDD------IE 292

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
           F +KPMNC GH+ V+   L+SYR+LP++  E+G V+R+E +G+LHGL RVR FTQDDAH+
Sbjct: 293 FGVKPMNCVGHIKVYEDELRSYRDLPIKYFEYGVVHRHEFTGALHGLFRVREFTQDDAHI 352

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
           FCT EQ+  + +++ + +  I   F F+  M+ +ST+PEK VGSD +W+ +   +K  +D
Sbjct: 353 FCTSEQIEEQIIEVVDFVDKIMSTFEFDYKMM-VSTKPEKAVGSDEVWEVSTQALKNAMD 411

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS 513
             KN+    I+ G     GAFYGPK +  + DAIGR+WQCGTIQ+DFNLP RF   Y   
Sbjct: 412 --KNNLPYEIDEG----GGAFYGPKIDIKITDAIGREWQCGTIQLDFNLPERFELEYNGE 465

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIAN 573
           ++EK  PVMIHRA+ GS ERFIGI+ E++ G  P++++P Q  +  I  +   YA+E+A+
Sbjct: 466 NNEKIQPVMIHRAILGSFERFIGILTEHYAGEFPMFIAPTQVAIVPIADTHHGYAKELAD 525

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
            L   +   E   +N+++N +IR     ++P+++I GD+E   R++ IR
Sbjct: 526 KLIDINADSEIYSKNDSLNKRIRTAEKTRVPMLVIIGDEEVEGRTVAIR 574


>gi|283955645|ref|ZP_06373138.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336]
 gi|283792870|gb|EFC31646.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336]
          Length = 602

 Score =  469 bits (1207), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 250/617 (40%), Positives = 380/617 (61%), Gaps = 24/617 (3%)

Query: 34  LAKKAVAVAINGKVCDLSDPVREGSI-EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEV 92
           + K+ +A   N  + D S  V++ ++ EI       SL VIRHSCAH+MA+A++S++PE 
Sbjct: 1   MEKEVIAYLDNETIID-SQSVKDTNLKEIYFDNSKESLEVIRHSCAHLMAQAIKSLYPEA 59

Query: 93  QVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFES 152
           +  +GP+IEDGFYYDF  E     ++L +IEKKM+E+        K  ++  +A   F++
Sbjct: 60  KFFVGPVIEDGFYYDFRVESKIGEEDLVKIEKKMKELAEAKIEISKYEITKNEALAKFQN 119

Query: 153 KKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDS 212
             +  K E+L  IP    V++Y+QGE+ DLCRGPHV +T +  +FFKL +VAGAY  GD 
Sbjct: 120 --DDLKQEVLLRIPDG-AVSIYKQGEFEDLCRGPHVPNT-KFLRFFKLTRVAGAYLGGDE 175

Query: 213 NRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRK 271
            R ML+RIYGTA+  ++ L +YL  +EE++KRDHRKL  E+ LF   ++ G G+  W   
Sbjct: 176 KREMLTRIYGTAFADKESLKEYLTIIEEAKKRDHRKLGTELKLFTFDDEIGGGLPIWLSN 235

Query: 272 GWKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
           G ++ ++ + +M  KI     YE +  P++L    W+ SGH+ +Y+ NM+  +       
Sbjct: 236 GARL-RSKLEHMLYKIHRLRGYEPVRGPELLKADAWKISGHYANYKENMYFTQI------ 288

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
           D + + +KPMNC GH+ ++   ++SYR+LP++  E+G V+R+E SG LHGL RVR FTQD
Sbjct: 289 DEQEYGIKPMNCVGHIKIYQSDVRSYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFTQD 348

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMK 449
           DAH+FC   Q+  + L+I   + ++ K F F   M ++ST+PEK +G D +W+ A   +K
Sbjct: 349 DAHIFCMPSQIKEQVLEILAFVDNLMKLFDFSYEM-EISTKPEKAIGDDEIWEIATKALK 407

Query: 450 GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAF 509
             LD      +  +  G+  G GAFYGPK +  + DA+ R WQCGTIQVDFNLPSRF   
Sbjct: 408 EALD------EQGLKYGIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDFNLPSRFKLE 461

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQ 569
           Y +S +EK  PVM+HRA+ GS ERFIGI+ E+  G  P +++P    +  I  + + YA+
Sbjct: 462 YTDSDNEKKQPVMLHRAILGSFERFIGILTEHCAGEFPFFIAPTAVGIVPIGEAHIAYAK 521

Query: 570 EIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           EI   L   ++  E   +NE+++ KIR    +K+P+I++ GD E ++RS+ +R   +   
Sbjct: 522 EIQKELLELNIDSEVYEKNESLSKKIRIAEKQKLPMILVLGDDEVAKRSVALRDRRAKEQ 581

Query: 630 QKVSLLDAIPILTKESL 646
           + +S LD    L KE +
Sbjct: 582 KNLS-LDEFIKLVKEKM 597


>gi|325672628|ref|ZP_08152324.1| threonine--tRNA ligase [Rhodococcus equi ATCC 33707]
 gi|325556505|gb|EGD26171.1| threonine--tRNA ligase [Rhodococcus equi ATCC 33707]
          Length = 683

 Score =  469 bits (1207), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 246/624 (39%), Positives = 373/624 (59%), Gaps = 38/624 (6%)

Query: 44  NGKVCDLS-DPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIED 102
           +G + DLS  P  +  +E +  +     +VIRHS AH++A+AVQ  +PE ++ IGP I+D
Sbjct: 45  DGNLKDLSWTPDVDVEVEAVAADTEDGRSVIRHSAAHVLAQAVQQEFPEAKLGIGPPIKD 104

Query: 103 GFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSH-EKARELFESKKEAYKVEI 161
           GFYYDF  E+PF+ ++LA++EK+M++I+     F ++ +   E AR   E   E +K+E+
Sbjct: 105 GFYYDFQVERPFTPEDLAKLEKRMKKIVKDAQRFSRRVVEDLEDART--ELANEPFKLEL 162

Query: 162 LESIPAKEN----------VTLY-----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVA 204
           ++     ++          +T+Y     R GE  W DLCRGPH+ +T  +  F K+ + +
Sbjct: 163 IDDKSGIDDPEVMEVGGGELTIYDNLNPRTGEVIWKDLCRGPHIPTTKYIPAF-KITRSS 221

Query: 205 GAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GS 263
            AYWRGD +R  L RIYGTAW + + L ++L  L E+E+RDHRKL  E+DLF   ++ GS
Sbjct: 222 AAYWRGDQSREDLQRIYGTAWESTEALDKHLELLAEAERRDHRKLGAELDLFSFPDELGS 281

Query: 264 GVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK 322
           G+  +H KG  I Q + +Y R R +++ YE + +P +   HL++ SGH D Y+  MF   
Sbjct: 282 GLPVFHPKGGIIRQEMENYSRKRHVEEGYEFVYSPHITKGHLYEVSGHLDWYKDGMFPAM 341

Query: 323 CADDTIKDLRT-------FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
             D+ + +  T       + LKPMNCP H  VF    +SYRELP+RL EFGSVYR E SG
Sbjct: 342 HIDEELNEDGTVRKPGQDYYLKPMNCPMHNLVFGSRGRSYRELPLRLFEFGSVYRYEKSG 401

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR-PEKR 434
            +HGL RVRG TQDDAH++CTKEQM +E       ++ + KD+G +   ++LST+ P+K 
Sbjct: 402 VVHGLTRVRGMTQDDAHIYCTKEQMRDELTTTLKFVLGLLKDYGLDDFYLELSTKNPDKF 461

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           VG DALW++A   ++ V           +N     G  AFYGPK    ++DA+GR WQ  
Sbjct: 462 VGDDALWEEATETLREV------GEASGLNLVPDPGGAAFYGPKISVQVQDALGRSWQMS 515

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQ 554
           TIQ+DFNLP RF+  Y  S   K  PVMIHRA+FGSIERF G++ E++ G  P WL+P+Q
Sbjct: 516 TIQLDFNLPERFDLEYTGSDGTKQRPVMIHRALFGSIERFFGVLTEHYAGAFPAWLAPVQ 575

Query: 555 AIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
            +   +  +  ++  ++   LK+  +  + D  ++ +  KIR H+ +K+P +++ G+++ 
Sbjct: 576 VVGIPVAEAFEDHLFDVVKQLKAAGVRADVDVSDDRMQKKIRNHTTQKVPFMLLAGERDV 635

Query: 615 SERSIGIRRFGSTTTQKVSLLDAI 638
              ++  R    T    V + DA+
Sbjct: 636 EAGAVSFRFRDGTQVNGVPVADAV 659


>gi|229820470|ref|YP_002881996.1| threonyl-tRNA synthetase [Beutenbergia cavernae DSM 12333]
 gi|229566383|gb|ACQ80234.1| threonyl-tRNA synthetase [Beutenbergia cavernae DSM 12333]
          Length = 671

 Score =  469 bits (1206), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 261/670 (38%), Positives = 388/670 (57%), Gaps = 52/670 (7%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
           MP DI++   DG+ ++    ATG+  A +  R++    VA+ ++G++ DL   +R+G+ +
Sbjct: 1   MP-DIRVHL-DGAPRDLEAPATGT-TAYADDRTV----VALRVDGELRDLDTQLRDGAHV 53

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           E +T + P  LA++RHS AH++A+AVQ + P+ ++ IGP I DGFYYDFD E PF+ ++L
Sbjct: 54  EGVTIDSPDGLAILRHSTAHVLAQAVQQVNPDAKLGIGPPITDGFYYDFDVETPFTPEDL 113

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL---------------ES 164
             +EK M  I+     F ++ +S ++AR   E   E YK+E++                 
Sbjct: 114 KALEKAMARIVKEGQTFRRRVVSDDEARA--ELADEPYKLELIGLKGPGAASAAEGAGAE 171

Query: 165 IPAKENVTLY-------RQGE---WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNR 214
           + A E +T+Y       R+ E   W DLCRGPH+ ST  +   F LM+ A AYWRG    
Sbjct: 172 VGAGE-LTIYDNVRGAGRETETVVWKDLCRGPHLPSTRLIGNGFSLMRSAAAYWRGSEKN 230

Query: 215 PMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGW 273
           P L R+YGTAW T+ +L  +L  L E+E+RDHR+L  E+DLF + E+ GSG+  +H KG 
Sbjct: 231 PQLQRVYGTAWPTKDDLRAHLERLAEAERRDHRRLGSELDLFSVPEEIGSGLAVFHPKGS 290

Query: 274 KIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMF------AVKCADD 326
            I   +  Y RR+ ++  Y+   TP +   HL++ S H + Y   M+      A    D 
Sbjct: 291 VIRMEMEDYSRRRHVEAGYDFAYTPHITKAHLFETSRHLEWYADGMYPPMQLDAEHHEDG 350

Query: 327 TIK-DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRG 385
           T+K + + + LKPMNCP H  VF    +SYRELP+RL EFG+VYR E SG +HGL R RG
Sbjct: 351 TLKREGQDYYLKPMNCPMHNLVFAARGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARG 410

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR-PEKRVGSDALWDDA 444
           FTQDDAH++CT+EQM +E   +   ++ + +D+G E+  ++LSTR PEK VG DA WD+A
Sbjct: 411 FTQDDAHIYCTREQMRDELASLLTFVLDLLRDYGLEEFYLELSTRDPEKSVGDDATWDEA 470

Query: 445 ENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPS 504
              ++   D    S  + ++     G  AFYGPK     +DAIGR WQ  TIQ+DF  P 
Sbjct: 471 TATLR---DVATASGLELVDDP---GGAAFYGPKISVQARDAIGRSWQLSTIQLDFFEPG 524

Query: 505 RFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA 564
            F+  Y  S   +  PVMIHRA+FGSIERF  I++E++ G +P WL+P+Q     +    
Sbjct: 525 LFDLEYTASDGSRQQPVMIHRALFGSIERFFAILLEHYAGAMPPWLAPVQVRAVPVAEPF 584

Query: 565 VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRF 624
             Y  ++   L++  +  E D  ++  N KIR  + +KIP ++I G ++A   ++  R  
Sbjct: 585 NAYLADVVAQLRAASVRAELDDGDDRFNKKIRTATTQKIPFVLIAGGEDAEAGAVSFRYR 644

Query: 625 GSTTTQKVSL 634
             T    V +
Sbjct: 645 DGTQRNGVPV 654


>gi|57237210|ref|YP_178222.1| threonyl-tRNA synthetase [Campylobacter jejuni RM1221]
 gi|73919779|sp|Q5HWW3|SYT_CAMJR RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|57166014|gb|AAW34793.1| threonyl-tRNA synthetase [Campylobacter jejuni RM1221]
 gi|315057643|gb|ADT71972.1| Threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni S3]
          Length = 602

 Score =  469 bits (1206), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 250/617 (40%), Positives = 379/617 (61%), Gaps = 24/617 (3%)

Query: 34  LAKKAVAVAINGKVCDLSDPVREGSI-EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEV 92
           + K+ +A   N  + D S  V+  ++ EI       SL VIRHSCAH+MA+A++S++PE 
Sbjct: 1   MEKEVIAYLDNETIID-SQSVKNTNLKEIYFDNSKESLEVIRHSCAHLMAQAIKSLYPEA 59

Query: 93  QVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFES 152
           +  +GP+IEDGFYYDF  E     ++L +IEKKM+E+        K  ++  +A   F++
Sbjct: 60  KFFVGPVIEDGFYYDFRVESKIGEEDLVKIEKKMKELAEAKIEISKYEITKNEALAKFQN 119

Query: 153 KKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDS 212
             +  K E+L  IP    V++Y+QGE+ DLCRGPHV +T +  +FFKL +VAGAY  GD 
Sbjct: 120 --DDLKQEVLLRIPDG-AVSIYKQGEFEDLCRGPHVPNT-KFLRFFKLTRVAGAYLDGDE 175

Query: 213 NRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRK 271
            R ML+RIYGTA+  ++ L +YL  +EE++KRDHRKL  E+ LF   ++ G G+  W   
Sbjct: 176 KREMLTRIYGTAFADKESLKEYLTIIEEAKKRDHRKLGTELKLFTFDDEIGGGLPIWLSN 235

Query: 272 GWKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
           G ++ ++ + +M  KI     YE +  P++L    W+ SGH+ +Y+ NM+  +       
Sbjct: 236 GARL-RSKLEHMLYKIHRLRGYEPVRGPELLKADAWKISGHYANYKENMYFTQI------ 288

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
           D + + +KPMNC GH+ ++   ++SYR+LP++  E+G V+R+E SG LHGL RVR FTQD
Sbjct: 289 DEQEYGIKPMNCVGHIKIYQSDVRSYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFTQD 348

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMK 449
           DAH+FC   Q+  + L+I   + ++ K F F   M ++ST+PEK +G D +W+ A   +K
Sbjct: 349 DAHIFCMPSQIKEQVLEILAFVDNLMKLFDFSYEM-EISTKPEKAIGDDEIWEVATKALK 407

Query: 450 GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAF 509
             LD      +  +  G+  G GAFYGPK +  + DA+ R WQCGTIQVDFNLPSRF   
Sbjct: 408 EALD------EQGLKYGIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDFNLPSRFKLE 461

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQ 569
           Y +S +EK  PVM+HRA+ GS ERFIGI+ E+  G  P +++P    +  I  + + YA+
Sbjct: 462 YTDSDNEKKQPVMLHRAILGSFERFIGILTEHCAGEFPFFIAPTAVGIVPIGEAHIAYAK 521

Query: 570 EIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           EI   L   ++  E   +NE+++ KIR    +K+P+I++ GD E ++RS+ +R   +   
Sbjct: 522 EIQKELLELNIDSEVYEKNESLSKKIRIAEKQKLPMILVLGDDEVAKRSVALRDRRAKEQ 581

Query: 630 QKVSLLDAIPILTKESL 646
           + +S LD    L KE +
Sbjct: 582 KNLS-LDEFIKLVKEKM 597


>gi|262197934|ref|YP_003269143.1| threonyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
 gi|262081281|gb|ACY17250.1| threonyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
          Length = 628

 Score =  469 bits (1206), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 245/608 (40%), Positives = 354/608 (58%), Gaps = 42/608 (6%)

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           E    L  IRHS AH+MA AV ++WP+ ++A GP   DGFYYDF  E  FS  +   I K
Sbjct: 12  EAEEQLHRIRHSTAHLMAAAVCTLWPDTKLAFGPPTGDGFYYDFLTEHRFSEQDFKAITK 71

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
           KM+E+I RD  F ++ +S   A +LFE + E  K E +  +   E ++LY  GE+ DLC 
Sbjct: 72  KMRELIKRDERFERREISKADALKLFEGQGEMLKAEHVGKLTDGE-ISLYETGEFVDLCS 130

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV ST  +  F KL  V+ +YW GD  R  L RIYGTAW T++EL ++L  LEE+++R
Sbjct: 131 GPHVDSTRDLGHF-KLTAVSSSYWLGDETREGLQRIYGTAWRTKEELKEHLRRLEEAKRR 189

Query: 245 DHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYM-RRKIKDDY-------EEIN 295
           DHR L R++ LF+  E  G G+ F+   G ++ Q L  +M +  I  DY       E ++
Sbjct: 190 DHRVLGRDLKLFNFPELAGPGLPFYLPHGARMLQELKDWMWKLNISGDYGHPDKVYEPVS 249

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL------------------------ 331
           TP +L    W  SGH  +YR NMF V   D+  + L                        
Sbjct: 250 TPHILKTTAWSISGHLQNYRDNMFLVYSLDELDEGLLKPQEAAEAKEQAEAEADAAKELG 309

Query: 332 -RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
              + LKPMNCPGH+ ++  G KSYR++PVR  EFG+VYR E +G+LHGL+RVR FTQDD
Sbjct: 310 LGNYGLKPMNCPGHIMMYKVGNKSYRDMPVRFFEFGTVYRYERTGTLHGLLRVRSFTQDD 369

Query: 391 AHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKG 450
           AH+FCT EQ+ +E     +    +    GF+   V L TR E  +GSD  W+ AE  ++ 
Sbjct: 370 AHLFCTAEQLPDELAGAFDFCCFVLDTLGFD-YYVALKTRGENTIGSDENWNLAEKALRD 428

Query: 451 VLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFY 510
           +L+             V  G+ AFYGPK ++I++D +GR+WQ GT+Q+DFNLP RF+  +
Sbjct: 429 ILEARAPGKY-----FVEEGDAAFYGPKVDFIIRDCLGREWQGGTVQLDFNLPERFDLEF 483

Query: 511 VNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQE 570
           V+ ++++  PVMIHRAVFGS ERF G+M+E F G  PLW +P+Q  V  I+   ++YA+ 
Sbjct: 484 VDENNQRQRPVMIHRAVFGSFERFFGLMVEEFGGAFPLWCAPVQVRVLPISDPYLDYART 543

Query: 571 IANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
           +   L+   L +E D   +T+  KIR    +K+P +++ G+ EA++ ++ +  +      
Sbjct: 544 VVAALRKQGLRVELDDGRDTLGKKIRNGKTQKVPYLVVVGENEATDNTVTVESYFDGRLG 603

Query: 631 KVSLLDAI 638
           +V   DA+
Sbjct: 604 EVKTTDAL 611


>gi|315453307|ref|YP_004073577.1| threonyl-tRNA synthetase [Helicobacter felis ATCC 49179]
 gi|315132359|emb|CBY82987.1| threonyl-tRNA synthetase [Helicobacter felis ATCC 49179]
          Length = 612

 Score =  469 bits (1206), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 232/568 (40%), Positives = 358/568 (63%), Gaps = 19/568 (3%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSS 116
           G+  I+  E   +L ++RHSCAH+MA+A+  ++P+ Q  +GP++E+GFYYDF  +   S 
Sbjct: 34  GAQAILFGESQEALEILRHSCAHLMAQAIAQLYPDAQFFVGPVVEEGFYYDFKTQTKISE 93

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
           ++LA+IE +M EI  R  P  K Y S ++A++ F  K ++ K  ++ +IP  + +++Y Q
Sbjct: 94  EDLARIEARMLEIAKRAHPITKSYCSRQEAQQRF--KNDSLKRAVMANIP-DDKLSIYAQ 150

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           GE+ DLCRGPH+ +T +  + FKL K+AGAY  GD+++ ML RIYG A+ T+Q L  YL 
Sbjct: 151 GEFEDLCRGPHLPNT-KFLQHFKLTKLAGAYLGGDASQEMLQRIYGIAFATKQSLKDYLT 209

Query: 237 FLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEI 294
            LEE++KRDHRKL +E+ LF   E+ G+G+  W   G ++ + +   +   + +  YE +
Sbjct: 210 QLEEAKKRDHRKLGQELGLFRFDEEVGAGLPIWLPNGMRLRKRIEDLLSVALLRSGYEPV 269

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
             P++L   LW+ SGH+++Y+ NM+       T  D   + +KPMNC GH+ V+ H L+S
Sbjct: 270 RGPEILKSSLWKISGHYENYKENMYF------TTIDEVEYGIKPMNCVGHIKVYQHALRS 323

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YR+LP+R  E+G V+R+E SG LHGL+RVR FTQDDAH+FC  +Q+  E   I      +
Sbjct: 324 YRDLPLRFYEYGVVHRHEQSGVLHGLLRVREFTQDDAHIFCRFDQIKAEVQAILAFTKRV 383

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
              FGF+  M +LST+P K +GSD +W+ A + +K  L+      +  +   V  G GAF
Sbjct: 384 MGAFGFDYEM-ELSTKPTKYIGSDEVWEQATSALKEALE------EQGVPFKVDEGGGAF 436

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  + DAI R WQCGT+QVD NLP+RF+  Y +       PVMIHRA+ GS ERF
Sbjct: 437 YGPKIDIKITDAIRRKWQCGTVQVDMNLPARFHLSYASEQDSPEMPVMIHRAILGSFERF 496

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
           I ++ E++ GN P +++P+Q  +  I++   +YAQ++   L+   +  E   +NE++  +
Sbjct: 497 IAVLTEHYGGNFPFFIAPVQVALVPISADQHDYAQDLCTQLRHAGIFAEVANKNESLAKR 556

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIR 622
           IR    +K+P+I + G KE  E ++ IR
Sbjct: 557 IRTLEKQKVPLIAVIGAKETQENALAIR 584


>gi|183982102|ref|YP_001850393.1| threonyl-tRNA synthetase ThrS [Mycobacterium marinum M]
 gi|238690929|sp|B2HM74|SYT_MYCMM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|183175428|gb|ACC40538.1| threonyl-tRNA synthetase ThrS [Mycobacterium marinum M]
          Length = 691

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 251/629 (39%), Positives = 371/629 (58%), Gaps = 39/629 (6%)

Query: 29  SISRSLAKKAVAVA--INGKVCDLS-DPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAV 85
            + R  A  A+ V     GK+ DLS  P  +  +  I        +VIRHS AH++A+AV
Sbjct: 36  GLPRRGAPDAIVVVRDAEGKLRDLSWVPDADAEVTPIAANTDDGRSVIRHSTAHVLAQAV 95

Query: 86  QSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQ-YLSHE 144
           Q ++P+ ++ IGP I DGFYYDF+  +PF+ D+L  +EK+M++I+     F ++ + S +
Sbjct: 96  QDLFPQAKLGIGPPITDGFYYDFEVLEPFTPDDLQALEKRMRQIVKEGQLFDRRVFESKD 155

Query: 145 KARELFESKKEAYKVEILESIPAKENV--------TLY-------RQGEWFDLCRGPHVR 189
           +ARE  E   E YK+E+++      +V        T Y       R+  W DLCRGPH+ 
Sbjct: 156 QARE--ELANEPYKLELVDDKSGDPDVMEVGGDELTAYDNLNPRTRERVWGDLCRGPHIP 213

Query: 190 STGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKL 249
           +T  +  F KL + + AYWRGD     L RIYGTAW +Q+ L +++  +EE+++RDHRKL
Sbjct: 214 TTKHIPAF-KLTRSSAAYWRGDQKNASLQRIYGTAWESQEALDKHIELIEEAQRRDHRKL 272

Query: 250 AREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQ 307
             E+DLF   ++ GSG+  +H KG  + + L  Y RRK  +  Y+ +N+P +    L+  
Sbjct: 273 GVELDLFSFPDEIGSGLAVFHPKGGIVRRELEDYSRRKHTEAGYQFVNSPHITKAQLFHT 332

Query: 308 SGHWDSYRANMF------AVKCADDTI-KDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           SGH D Y   MF      A   AD T+ K  + + LKPMNCP H  +F    +SYRELP+
Sbjct: 333 SGHLDWYADGMFPPMQIDAEYNADGTVRKPGQDYYLKPMNCPMHCLIFRARGRSYRELPL 392

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RL EFG+VYR E SG +HGL RVRG T DDAH+FCT+EQM +E   +   ++ +  D+G 
Sbjct: 393 RLFEFGTVYRYEKSGVVHGLTRVRGLTMDDAHIFCTREQMRDELRSLLRFVLDLLSDYGL 452

Query: 421 EKIMVKLSTR-PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
               ++LST+ P+K VGSD +W++A N++  V       ++  +      G  AFYGPK 
Sbjct: 453 TDFYLELSTKDPDKFVGSDEVWEEATNVLAEV------GAESGLELVPDPGGAAFYGPKI 506

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
              +KDA+GR WQ  TIQ+DFN P RF   Y  +   +  PVMIHRA+FGSIERF GI+ 
Sbjct: 507 SVQVKDALGRTWQMSTIQLDFNFPERFGLEYTAADGTRQRPVMIHRALFGSIERFFGILT 566

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E++ G  P WL+P+QA+   +    V Y +++A  LKSH + +E D  ++ +  KI  H+
Sbjct: 567 EHYAGAFPAWLAPVQAVGIPVADEHVAYLEQVAAQLKSHGVRVEVDTSDDRMAKKIVHHT 626

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTT 628
            +K+P +++ GD++    ++   RFG  T
Sbjct: 627 NQKVPFMLLAGDRDVQADAVSF-RFGDRT 654


>gi|224417829|ref|ZP_03655835.1| threonyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|253827169|ref|ZP_04870054.1| threonyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|313141370|ref|ZP_07803563.1| threonyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|253510575|gb|EES89234.1| threonyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|313130401|gb|EFR48018.1| threonyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
          Length = 605

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 235/559 (42%), Positives = 348/559 (62%), Gaps = 19/559 (3%)

Query: 67  PRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKM 126
           P SLA++RH+CAH+MAEA++S++PE Q  +GP++E+GFYYDF        ++LA+IE KM
Sbjct: 35  PDSLAIMRHTCAHLMAEAIKSLYPEAQFFVGPVVEEGFYYDFRVNHKIGEEDLAKIESKM 94

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKE-NVTLYRQGEWFDLCRG 185
           +EI  +     K +L  ++A E F  K +  K  ++  IP  +  +++Y QG++ DLCRG
Sbjct: 95  KEIAKKGEQITKYHLPRQEAIEKF--KNDDLKQAVISRIPQGDGTLSIYSQGDFEDLCRG 152

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PH+  T ++   FKL K+AGAY  GD    ML RIYG A+  ++ L QYL  +EE++KRD
Sbjct: 153 PHL-PTLKLLNAFKLTKIAGAYLGGDEKAEMLVRIYGIAFADKESLNQYLRQMEEAKKRD 211

Query: 246 HRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQH 303
           HRK+  EM+LF   E+ G+G+  W  KG ++ + +   + +  I+  YE +  P++L   
Sbjct: 212 HRKVGTEMELFTFDEEIGAGLPIWLPKGARLRRNIERLLTKALIQRGYEPVRGPEILKSA 271

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           +W+ SGH+ +Y  NM+       T  D   + +KPMNC GH+ V+   L+SYR+LP+R  
Sbjct: 272 VWKTSGHYSNYGENMYF------TTIDGVEYGIKPMNCVGHIKVYQSALRSYRDLPLRFY 325

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           E+G V+R+E SG LHGL+RVR FTQDDAH+FC   Q+  E   I +    I   F F   
Sbjct: 326 EYGVVHRHEKSGVLHGLLRVREFTQDDAHIFCRPSQIATEVENIIDFTKKIMDSFDFSYE 385

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           M ++STRPEK +GSD +W++A   +K  L+         I   +  G GAFYGPK +  +
Sbjct: 386 M-EISTRPEKSIGSDEVWEEATQALKNALEICN------IPYKIDEGGGAFYGPKIDIKI 438

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            DAIGR WQCGTIQ+D NLP RF   Y + ++    PVMIHRA+ GS ERFI I+ E+F 
Sbjct: 439 TDAIGRKWQCGTIQIDMNLPERFKLEYTDENNSSKQPVMIHRAILGSFERFIAILTEHFG 498

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P +++P Q I+  +  +   YA+E+ N L + ++  E D +NET+N +IR    +++
Sbjct: 499 GEFPFFIAPTQIIIIPLGEAQESYAKELRNQLLNVNVYAEIDNKNETLNKRIRNAEKQRV 558

Query: 604 PIIIICGDKEASERSIGIR 622
           P+I++ G KE  E+ + IR
Sbjct: 559 PMIVVLGAKEEQEKIVAIR 577


>gi|118462301|ref|YP_882672.1| threonyl-tRNA synthetase [Mycobacterium avium 104]
 gi|254775941|ref|ZP_05217457.1| threonyl-tRNA synthetase [Mycobacterium avium subsp. avium ATCC
           25291]
 gi|166225462|sp|A0QID4|SYT_MYCA1 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|118163588|gb|ABK64485.1| threonyl-tRNA synthetase [Mycobacterium avium 104]
          Length = 684

 Score =  468 bits (1204), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 252/637 (39%), Positives = 368/637 (57%), Gaps = 43/637 (6%)

Query: 35  AKKAVAVA--INGKVCDLS-DPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE 91
           A  AV V    +G + DLS  P  +  +  +        +VIRHS AH++A+AVQ ++P+
Sbjct: 35  APDAVVVVRDASGTLRDLSWVPDTDAEVVPVAANTDEGRSVIRHSAAHVLAQAVQELFPQ 94

Query: 92  VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQ-YLSHEKARELF 150
            ++ IGP I DGFYYDFD  +PF+ ++L ++EK+M++I+     F ++ Y S E+AR   
Sbjct: 95  AKLGIGPPITDGFYYDFDVPEPFTPEDLDKLEKRMRQIVKEGQLFSRRVYESKEQARA-- 152

Query: 151 ESKKEAYKVEILESIPAKENV--------TLY-------RQGEWFDLCRGPHVRSTGQVK 195
           E   E YK+E+++      ++        T Y       R+  W DLCRGPH+ +T  + 
Sbjct: 153 ELAGEPYKLELVDDKSGDPDIMEVGGDELTAYDNLNPRTRERVWGDLCRGPHIPTTRHIP 212

Query: 196 KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDL 255
            F KL + + AYWRGD N   L RIYGTAW +Q+ L  +L  +EE+++RDHRKL  E+DL
Sbjct: 213 AF-KLTRSSAAYWRGDQNNASLQRIYGTAWESQEALDDHLRLIEEAQRRDHRKLGSELDL 271

Query: 256 FHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDS 313
           F   ++ GSG+  +H +G  + + L  Y RRK I+  YE +NTP +    L+  SGH D 
Sbjct: 272 FSFPDEIGSGLAVFHPRGGVVRRELEEYSRRKHIEAGYEFVNTPHITKAQLFHTSGHLDW 331

Query: 314 YRANMFAVKCADDTIKDLRT-------FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFG 366
           Y   MF     D    D  T       + LKPMNCP H  ++    +SYRELP+RL EFG
Sbjct: 332 YADGMFPPMHLDAEYDDDGTVRKPGQDYYLKPMNCPMHTLIYRSRGRSYRELPLRLFEFG 391

Query: 367 SVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK 426
           +VYR E SG +HGL R RGFT DD+H+FCT+EQ+  E   +   ++ +  D+G     ++
Sbjct: 392 TVYRYEKSGVVHGLTRARGFTMDDSHIFCTREQLHGELASLLRFVLELLGDYGLTDFYLE 451

Query: 427 LSTR-PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKD 485
           LST+ P+K VGSD +W+ A   +  V      +++  +      G  AFYGPK     +D
Sbjct: 452 LSTKDPDKFVGSDEMWEQATTSLADV------AAESGLELVPDPGGAAFYGPKISVQARD 505

Query: 486 AIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           A+GR WQ  TIQVDFN P RF   Y  S   +  PVMIHRA+FGSIERF GI+ E++ G 
Sbjct: 506 ALGRSWQMSTIQVDFNFPERFELEYTASDGTRQRPVMIHRALFGSIERFFGILTEHYAGA 565

Query: 546 LPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPI 605
            P WL+P+QA+   +    V Y + +A  LKSH + +E D  ++ +  KI  H+ +K+P 
Sbjct: 566 FPAWLAPVQAVGIPVADEHVPYLESVAAQLKSHGVRVEVDASDDRMAKKIVHHTAQKVPF 625

Query: 606 IIICGDKEASERSIGIRRFGSTT----TQKVSLLDAI 638
           +++ GD++ +  ++   RFG  T      + S +DAI
Sbjct: 626 MLLAGDRDVAAGAVSF-RFGDRTQINGVPRDSAVDAI 661


>gi|269216980|ref|ZP_06160834.1| threonine--tRNA ligase [Slackia exigua ATCC 700122]
 gi|269129787|gb|EEZ60871.1| threonine--tRNA ligase [Slackia exigua ATCC 700122]
          Length = 587

 Score =  468 bits (1204), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 233/565 (41%), Positives = 351/565 (62%), Gaps = 17/565 (3%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQIEKKMQE 128
           L V+RHS AHIMA+AV+ ++PE     GP  ++GFYYD D  +   S ++ A IE +M++
Sbjct: 19  LDVLRHSAAHIMAQAVKRLYPEADFGYGPATDNGFYYDIDFADTKISEEDFAAIEAEMKK 78

Query: 129 IIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           I   +  F    L   +A  L E + E YKVE +  +P    +T Y+QGE+ D+C GPH+
Sbjct: 79  ICKENLKFSVFELPRAEAVALMEERGEKYKVEHIGDLPEDSRITFYQQGEYIDMCVGPHI 138

Query: 189 RSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRK 248
             T  +K F KL  V+GAYW+GD +  ML+RI G A+ +++EL ++   + E+EKRDHR+
Sbjct: 139 CYTKALKAF-KLTAVSGAYWKGDKDNKMLTRINGIAFRSKEELAEHERMVAEAEKRDHRR 197

Query: 249 LAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQVLDQHLWQQ 307
           + REM+LF +A++G G  FW   G ++  +L+ Y M  +    YE+++TP +L++ LW+ 
Sbjct: 198 IGREMELFMMADEGPGFPFWLPNGMRLKNSLMQYWMDMQDAYGYEQVDTPIILNKSLWET 257

Query: 308 SGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGS 367
           SGHWD Y+ NM+  +       D   +A+KPMNCPG   ++    +SYR+LP++LAE G 
Sbjct: 258 SGHWDHYKENMYTTEI------DGEEYAVKPMNCPGACLIYKSKPRSYRDLPLKLAEAGK 311

Query: 368 VYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKL 427
            +R+E  G+LHGL RVR FTQDDAH+F   +Q+  +     +LI + Y+ FGF    V+L
Sbjct: 312 DHRHELKGALHGLFRVRAFTQDDAHLFIRPDQITEQVTDTAHLISTYYEQFGF-PYRVEL 370

Query: 428 STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAI 487
           STRPE  +GSD  W+ AE  ++  L+ +       ++  +  G+GAFYGPK ++ L+D +
Sbjct: 371 STRPEDSMGSDEDWELAEAGLRAALEAMG------VDYILNEGDGAFYGPKIDFHLQDCL 424

Query: 488 GRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           GR WQCGTIQ+DF LP  F   Y ++   K  P+MIHRA FGS ERFIG++ E + G  P
Sbjct: 425 GRTWQCGTIQLDFQLPQNFELEYTDADGMKKRPIMIHRAGFGSFERFIGMLTEQYAGKFP 484

Query: 548 LWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE-HSIKKIPII 606
            WLSP Q  V  ++    EYA+ + + L++  +  + D R+E I YKIRE   I ++P +
Sbjct: 485 TWLSPCQVKVLPVSEKHREYARGVYDALRAAGIRAKLDERDEKIGYKIREARGIDRVPYM 544

Query: 607 IICGDKEASERSIGIRRFGSTTTQK 631
           +I G+KE +  +I +R   + T ++
Sbjct: 545 LILGEKEENAGNISVRDRSNETVER 569


>gi|309776920|ref|ZP_07671890.1| threonine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
 gi|308915331|gb|EFP61101.1| threonine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
          Length = 580

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 245/589 (41%), Positives = 385/589 (65%), Gaps = 23/589 (3%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSD 117
           +++I  ++   L+ + HSCAH+MA+AV+ ++P+ +  +GP+I +GFYYD D  ++    +
Sbjct: 1   MKMIDIKEHEELSKLNHSCAHMMAQAVKRLYPQAKFWVGPVISEGFYYDIDLGDEVIKEE 60

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +LA+IEK+M++I       +++ +S ++A E+F  K + YK++++  + A   +T Y+QG
Sbjct: 61  DLAKIEKEMKKIAKDGKRIVRKEISKDEAMEMF--KDDPYKMDLIRDL-ADGTITCYQQG 117

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           E+ DLCRGPHV +  Q+K F KL+K +GAYW+GD++  ML RIYG  + T +EL ++L+ 
Sbjct: 118 EFIDLCRGPHVDTVKQLKNF-KLLKHSGAYWKGDASNKMLQRIYGICFPTAEELEEHLHL 176

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINT 296
           LEE++KRDH+KL RE+ LF ++E   G+ F+   G  I   L ++      K++Y+ I T
Sbjct: 177 LEEAKKRDHKKLGRELGLFMMSEYAPGMPFFLPNGMIIRNLLENFWYEEHTKENYQFIKT 236

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P ++ + LW+ SGHW++Y+ NM+       T+ D R FA+KPMNCPG + VF +GL SY+
Sbjct: 237 PIMMSKELWEVSGHWENYKENMYT------TMVDDREFAIKPMNCPGSLLVFKNGLHSYK 290

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +LP+R+ E G V+R+E SG+L+GL RVR FTQDDAH+F   +Q+  E +++   I  +Y 
Sbjct: 291 DLPLRMGELGQVHRHEASGALNGLFRVRTFTQDDAHIFMRPDQIEGEVMRLIQFIDRVYS 350

Query: 417 DFGFEKIMVKLSTRPEKR-VGSDALWDDAENIMKGVLDTIKNSSQD-RINTGVLLGEGAF 474
            FG     ++LSTRPEK+ +G  A+W+ +E   K + D   ++ ++ ++N G    +GAF
Sbjct: 351 VFGLS-YRIELSTRPEKKYIGDLAIWEQSE---KALADACVHAGKEYKVNPG----DGAF 402

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK ++ +KD++GR+WQCGTIQ+D NLP RF+  YV     K  PVM+HR +FGSIERF
Sbjct: 403 YGPKLDFHIKDSLGREWQCGTIQLDMNLPERFDLTYVEKDGSKVRPVMLHRVIFGSIERF 462

Query: 535 IGIMIENFKGNLPLWLSPIQ-AIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           IGI+IE+F G+ P+WL+P Q ++V       +EYA E+   L +     + D RNE + Y
Sbjct: 463 IGILIEHFAGHFPVWLAPQQVSVVPVHHEKHLEYANEVNEKLLALGYRSKLDARNEKLGY 522

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +IRE  + KIP  ++ GD E    S+ +RR  S  +  + L D I ++ 
Sbjct: 523 RIREAQLSKIPYQLVIGDGEIENGSVTLRRAQSKKSLTMPLEDFIAMMN 571


>gi|88942337|sp|Q7UJ52|SYT_RHOBA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|327537946|gb|EGF24643.1| threonyl-tRNA synthetase [Rhodopirellula baltica WH47]
          Length = 743

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 261/708 (36%), Positives = 387/708 (54%), Gaps = 74/708 (10%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS----- 58
           ++++  PDGS+K  P  AT  DVA+ IS  LA+  VA  ++G + D   P+ E +     
Sbjct: 16  EVQVRLPDGSLKTQPADATAMDVAKEISEGLARSVVAAEVDGTIVDSFRPLGEIADDENV 75

Query: 59  --IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSS 116
             + ++T  D  +L V+RHS AH+MA A+  I+  V +A GP    GFYYDFD  +  S 
Sbjct: 76  VPLRLLTTRDESALDVLRHSAAHVMARAIMRIYKGVSLAFGPTTSGGFYYDFDMPEKISE 135

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES-IPAKENVTLYR 175
           D+  +IE ++++II    PF +  L  ++AR+L +   +  KVE +E+ +  +  V+ YR
Sbjct: 136 DDFPKIEAEIKKIIKAKEPFERFVLERDEARKLCDDLDQDLKVEHIETGLGDQATVSFYR 195

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
           QGE+ DLCRGPH+   G +K   KL+ VAGAYW+GD++   L R+YGTA+  ++EL  YL
Sbjct: 196 QGEFVDLCRGPHIPHAGMIKAI-KLLSVAGAYWKGDASGRQLQRVYGTAFFDKKELASYL 254

Query: 236 YFLEESEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEE 293
             +EE+++RDHR L ++  LF I  E G G+  W  KG ++  TL  ++RR++    Y+ 
Sbjct: 255 EQIEEAKRRDHRVLGKQHGLFAINPEVGQGLCLWLPKGARVRVTLEDFLRRELLSRGYDP 314

Query: 294 INTPQVLDQHLWQQSGHWDSYR-------------------------------------- 315
           + +P +    +++ SGH+  YR                                      
Sbjct: 315 VYSPHIGRVEMYETSGHFPYYRDSQFAPLFGSEVGGLLDAWSTRLDKDDLSKDDEDKLIA 374

Query: 316 -ANMFAVKCAD-------DTIKDL--------RTFALKPMNCPGHVAVFNHGLKSYRELP 359
            A +F VK  D       D  KD+          + LKPMNCP H  +F    +SYR+LP
Sbjct: 375 AAEVFGVKLPDYKPSASNDAKKDVLHRWQLNHERYLLKPMNCPHHCQIFGAQPRSYRQLP 434

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +RL EFG+VYR+E +G L+G+MRVRG TQDDAH+FCT +Q+  E      L   + +  G
Sbjct: 435 LRLFEFGTVYRHEQTGELNGMMRVRGLTQDDAHIFCTADQVEEEFRATIELTKFVLESVG 494

Query: 420 FEKIMVKLSTR---PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
            +   V+LS R     K VGS+  WD AE  ++GVL+      Q  ++     GE AFYG
Sbjct: 495 LDDYRVQLSLRDPDSSKYVGSEENWDHAEGALRGVLE------QSGLSFNEEPGEAAFYG 548

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK +++++D IGR WQ GT+Q+D+NLP RF   Y  + +    PVMIHRA FGS+ERF G
Sbjct: 549 PKADFMVRDCIGRSWQLGTVQLDYNLPERFKLEYKGNDNATHRPVMIHRAPFGSLERFTG 608

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           ++IE+F G  P+WLSP Q  V  ++  +VEYA  +A  L      +  D  +  +  KIR
Sbjct: 609 MLIEHFAGAFPMWLSPEQIRVLPLSDKSVEYATAVAKQLDEAGFKVTVDASDGKVQAKIR 668

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
              I  +  + + G KEA    + +R         + + +AI  L KE
Sbjct: 669 NAQIDLVNYMAVVGPKEAESGQVALRDRIEGDLGSMPIKEAIARLQKE 716


>gi|317471544|ref|ZP_07930893.1| threonyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
 gi|316900979|gb|EFV22944.1| threonyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
          Length = 539

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 238/538 (44%), Positives = 337/538 (62%), Gaps = 15/538 (2%)

Query: 108 FDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPA 167
            +K+ PF+ D+L +IE +M++I+             E+A    + + E YKVE++E +P 
Sbjct: 1   MEKDTPFTQDDLEKIEAEMKKIVKEGLQITCFTKPREEAIAFMKEQNEPYKVELIEDLPE 60

Query: 168 KENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNT 227
              ++ Y+QGE+ DLC GPH+ +T  VK F KL  +AGAYWRG+    ML+RIYGTA+  
Sbjct: 61  DSVISFYQQGEFIDLCAGPHLMTTKPVKAF-KLTSLAGAYWRGNEKNQMLTRIYGTAFAK 119

Query: 228 QQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-K 286
           + EL  YL  +EE++KRDHRKL +E+ LF + ++G G  F+   G  +  TL+ Y R   
Sbjct: 120 KAELKDYLTMMEEAKKRDHRKLGKELGLFMMRDEGPGFPFFLPNGMVLKNTLLDYWREIH 179

Query: 287 IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA 346
            K  Y EI++P +L +HLW+ SGHWD Y+ NM+       T+ D   FA+KPMNCPG V 
Sbjct: 180 NKAGYVEISSPIMLSRHLWETSGHWDHYQENMYT------TVIDEEDFAIKPMNCPGGVL 233

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           V+    +SYR+LP+R+ E G V+R+E SG LHGLMRVR FTQDDAH+F   EQ+ +E   
Sbjct: 234 VYQSEPRSYRDLPLRMGELGLVHRHEKSGQLHGLMRVRCFTQDDAHIFMMPEQIKDEIKG 293

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           +  LI  +Y  FGF K  V+LSTRPE  +GSD  W+ A + ++  LD +       ++  
Sbjct: 294 VAALIDQVYSLFGF-KYHVELSTRPEDSMGSDEDWEMATDSLRSALDDLG------LDYV 346

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
           V  G+GAFYGPK ++ L+D+IGR WQCGTIQ+DF LP RF+  Y  +  EK  P+MIHR 
Sbjct: 347 VNEGDGAFYGPKIDFHLEDSIGRTWQCGTIQLDFQLPLRFDLHYTGADGEKHRPIMIHRV 406

Query: 527 VFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF 586
            FGSIERFIGI+IE+F G  P WL+P+Q  V  I+   +EY  ++ + LK+  +  E D 
Sbjct: 407 AFGSIERFIGILIEHFAGAFPTWLAPVQVKVIPISDKHLEYGTKVLDALKAAGIRAEIDT 466

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R E + YKIRE  + KIP +++ G KE   +++ +R        ++SL D I  + KE
Sbjct: 467 RAEKMGYKIREAQLHKIPYMLVVGGKEEENQAVSVRSRFKGDEGQMSLDDFICAIRKE 524


>gi|313681237|ref|YP_004058975.1| ser-tRNA(thr) hydrolase; threonyl-tRNA synthetase [Sulfuricurvum
           kujiense DSM 16994]
 gi|313154097|gb|ADR32775.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Sulfuricurvum
           kujiense DSM 16994]
          Length = 602

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 244/610 (40%), Positives = 371/610 (60%), Gaps = 21/610 (3%)

Query: 39  VAVAINGKVCDLSDPVREGSI--EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAI 96
           +A+  N ++ DL      G    EI     P +L VIRHSCAH+MAEA+++++ + +  +
Sbjct: 4   IAIKHNDQIVDLQTAGALGITGEEIAYDNSPDALEVIRHSCAHLMAEAIKALYTDAKFFV 63

Query: 97  GPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEA 156
           GP +++GFYYDF   +    D+L  IEKKM +I        +  ++  +AR  F +  + 
Sbjct: 64  GPTVKEGFYYDFKVNETIGEDDLKTIEKKMLDIAKGKEKIERYEITKNEARAKFAN--DH 121

Query: 157 YKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPM 216
            K  +++ IP+ + VT+Y+QGE+ DLCRGPH+ S G ++ +FKL K++GAY  GDS   M
Sbjct: 122 LKQAVMDRIPS-DTVTIYKQGEFEDLCRGPHLPSVGLLR-YFKLTKISGAYLGGDSKNEM 179

Query: 217 LSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKI 275
           L+RIYG A+  ++ L  YL  + E+EKRDHRK+  EM LF   E+ G+G   W   G ++
Sbjct: 180 LTRIYGIAFADKESLKAYLDQMAEAEKRDHRKIGAEMKLFTFREEVGAGFPIWLPAGARM 239

Query: 276 FQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
              L   + +   K  YE +  P++L   LW+ SGH+ +Y  NM+          D   F
Sbjct: 240 RSRLEQLLFKAHRKRGYEPVRGPEMLRSDLWKVSGHYQNYGENMYFTHI------DELEF 293

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
            +KPMNC GH+ V+ H L SYR+LP++  E+G V+R+E +G+LHGL RVR FTQDDAH+F
Sbjct: 294 GVKPMNCVGHIKVYEHDLHSYRDLPLKYFEYGVVHRHEMTGALHGLFRVREFTQDDAHIF 353

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDT 454
           CT +Q+  + +++ + +  I K F F   M+ +ST+PEK VG DA+W+ + N +K  +D 
Sbjct: 354 CTADQIEQQIIEVVDFVDKIMKTFEFNYKMM-ISTKPEKAVGDDAVWEISTNALKTAMD- 411

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH 514
            KN+    I+ G     GAFYGPK +  + DAIGR+WQCGTIQ+DFNLP+RF   Y    
Sbjct: 412 -KNNLSYEIDEG----GGAFYGPKIDIKITDAIGREWQCGTIQLDFNLPARFELEYNGEE 466

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANL 574
           + K  PVMIHRA+ GS ERF+GI+ E++ G  P++++P Q  +  I  +   YA+E+A+ 
Sbjct: 467 NAKIQPVMIHRAILGSFERFVGILTEHYAGEFPMFIAPTQVAIVPIAPTHEAYARELADK 526

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           L       E   +NE++N +IR     ++P+II+ GD+E + +SI +R   S     +S 
Sbjct: 527 LIDMGADFEIFDKNESLNKRIRTAEKGRVPMIIVLGDEEVANKSIAVRDRRSREQYNLSE 586

Query: 635 LDAIPILTKE 644
            D I ++ ++
Sbjct: 587 EDFISLVKQK 596


>gi|332670551|ref|YP_004453559.1| threonyl-tRNA synthetase [Cellulomonas fimi ATCC 484]
 gi|332339589|gb|AEE46172.1| threonyl-tRNA synthetase [Cellulomonas fimi ATCC 484]
          Length = 670

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 249/640 (38%), Positives = 372/640 (58%), Gaps = 49/640 (7%)

Query: 36  KKAVAVAINGKVCDLSDPVREGSI-EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           +  +   ++G++ DL  P+ +G++ E +T +DP  LAV+RHS AH++A+AVQ + P+ ++
Sbjct: 30  RDVIVARVDGELRDLHLPLPDGAVVEGVTVQDPEGLAVLRHSAAHVLAQAVQEVNPKAKL 89

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            IGP I DGFYYDFD + PF+ D+L  IEK M  I+     F +  ++ E+ARE  E + 
Sbjct: 90  GIGPPITDGFYYDFDVDTPFTPDDLRAIEKVMGRIVKEGQTFRRWDVTEEQARE--ELRD 147

Query: 155 EAYKVEI--LESIPAKEN----------VTLY-------RQGE---WFDLCRGPHVRSTG 192
           E YK+E+  L+  PA  +          +++Y       R+ E   W DLCRGPHV ST 
Sbjct: 148 EPYKLELIGLKGDPAAADGASVEVGLGGLSIYQNVRGAGRESEQVVWQDLCRGPHVPSTK 207

Query: 193 QVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLARE 252
            +   F+L + A AYWRG    P L R+YGTAW ++ EL  YL  + E+E+RDHR+L  E
Sbjct: 208 VLGNGFQLTRSAAAYWRGSEKNPQLQRVYGTAWPSKDELKAYLERVAEAERRDHRRLGSE 267

Query: 253 MDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGH 310
           +DLF   ++ GSG+  +H KG  I   + +Y R R ++  Y  +NTP +  + L+Q SGH
Sbjct: 268 LDLFSFPDEIGSGLAVFHPKGGLIRMEMEAYSRKRHVEAGYSFVNTPHITKERLFQLSGH 327

Query: 311 WDSYRANMFAVKCADDTIKDL-------RTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
            D Y   M+     D+ + D        + + LKPMNCP H  V+    +SYRELP+RL 
Sbjct: 328 LDWYADGMYPPMHLDEELDDEGNVKRQGQNYYLKPMNCPMHNLVYRSRGRSYRELPLRLF 387

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFG+VYR E SG +HG+ R RGFTQDDAH++CT +QM +E  ++   ++ + KD+G +  
Sbjct: 388 EFGTVYRYEKSGVVHGMTRARGFTQDDAHIYCTLDQMKDELTRLLTFVLDLLKDYGLDDF 447

Query: 424 MVKLSTR-PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL----GEGAFYGPK 478
            ++LST+ PEK VG D +W+ A        +T++  +Q   ++G+ L    G  AFYGPK
Sbjct: 448 YLELSTKNPEKFVGDDDVWERA-------TETLREVAQ---SSGLELVPDPGGAAFYGPK 497

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
                KDAIGR WQ  TIQ+DFNLP  F   Y      +  PVMIHRA+FGSIERF  ++
Sbjct: 498 ISVQAKDAIGRTWQMSTIQLDFNLPELFELEYTAPDGSRQRPVMIHRALFGSIERFFAVL 557

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
            E++ G  P WL+P+Q +   +      Y +++   L++  +  E D  ++    KIR  
Sbjct: 558 TEHYAGAFPAWLAPVQVLAVPVAEPFEPYLEDVVAQLRAEGIRAEIDRSDDRFGKKIRNA 617

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           S +KIP ++I G ++A   ++  R         V + +A+
Sbjct: 618 STQKIPFVLIVGGEDADAGAVSFRYRDGRQDNGVPVAEAV 657


>gi|296271847|ref|YP_003654478.1| threonyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299]
 gi|296096022|gb|ADG91972.1| threonyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299]
          Length = 602

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 238/589 (40%), Positives = 368/589 (62%), Gaps = 23/589 (3%)

Query: 39  VAVAINGKVCDL-SDPVREGSIEIITPEDPR-SLAVIRHSCAHIMAEAVQSIWPEVQVAI 96
           + V  +G++ DL +        E+I  ++ + SL ++RHSCAH+MA+A++ ++PE +  +
Sbjct: 4   IGVLNDGQIYDLQTAEALNIQGEVIKADNSKESLEILRHSCAHLMAQAIKELYPEAKFFV 63

Query: 97  GPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEA 156
           GP++ +GFYYDF  E   S ++L +IEKKM+E+     P  +   S E+  + F S  + 
Sbjct: 64  GPVVSEGFYYDFKVESKISDEDLPKIEKKMKELANAKLPIERYEASREEISQKFNS--DE 121

Query: 157 YKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPM 216
            K  +L  I   + +T+Y+QG++ DLCRGPH+ +T  ++ F KL +VAGAY  GD    M
Sbjct: 122 LKQAVLSRI-TDDTLTMYKQGDFEDLCRGPHLPNTRMIRSF-KLTRVAGAYLGGDEKNEM 179

Query: 217 LSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKI 275
           ++RIYG A+  +QEL  Y+  LEE++KRDHRKL  E++LF  ++D G+G+  W   G ++
Sbjct: 180 ITRIYGIAFFDKQELFDYVKMLEEAKKRDHRKLGTELELFTFSDDVGAGLPMWLPNGARL 239

Query: 276 FQTL--ISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
              L  I Y   +++  YE +  P++L   +W  SGH  +Y  NM+       T  D + 
Sbjct: 240 RSKLEHILYKAHRVRG-YEPVRGPEILKSKMWDISGHNANYSQNMYY------TTIDEQQ 292

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
           +A+KPMNC GH+ +F + L SY++LP +L E+G V+R+E SG++HGL RVR FTQDD+H+
Sbjct: 293 YAMKPMNCVGHIQIFKNSLVSYKDLPKKLFEYGVVHRHEMSGAMHGLFRVREFTQDDSHI 352

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
           FCT++QM +   ++   + ++ K F F K  +++ST+PEK +G D  W   E   KG++D
Sbjct: 353 FCTQDQMKDVIFEVLEFVDAVLKLFDF-KYEIEVSTKPEKAIGDDMFW---EKTTKGIMD 408

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS 513
            +    +  I  G+  G GAFYGPK +  + DAIGR WQCGT+QVD NLPSRF A Y+N 
Sbjct: 409 AL---DEKNITYGIDEGGGAFYGPKIDIKILDAIGRKWQCGTVQVDMNLPSRFEAEYINE 465

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIAN 573
             EK  PVMIHRA+ GS ERFIGI+ E+  G  P  ++P Q I   I  +  EYA+E+ N
Sbjct: 466 KGEKEQPVMIHRAILGSFERFIGILTEHCAGEFPFVIAPTQVIFVPIADTHNEYAKELQN 525

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
            L  + +  +    NE++N +IR    +++P+I++ GD+E   +++ +R
Sbjct: 526 ELLQNSMDSKIFNMNESLNKRIRMAEKQRVPMIVVIGDEEVENKTVALR 574


>gi|157414515|ref|YP_001481771.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81116]
 gi|172047019|sp|A8FK07|SYT_CAMJ8 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|157385479|gb|ABV51794.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81116]
 gi|307747157|gb|ADN90427.1| Threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni M1]
 gi|315932015|gb|EFV10968.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 327]
          Length = 602

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 249/617 (40%), Positives = 378/617 (61%), Gaps = 24/617 (3%)

Query: 34  LAKKAVAVAINGKVCDLSDPVREGSI-EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEV 92
           + K+ +A   N  + D S  V+  ++ EI       SL VIRHSCAH+MA+A+++++PE 
Sbjct: 1   MEKEVIAYLDNETIID-SQSVKNTNLKEIYFDNSKESLEVIRHSCAHLMAQAIKNLYPEA 59

Query: 93  QVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFES 152
           +  +GP+IEDGFYYDF  E     ++L +IEKKM+E+        K  ++  +A   F++
Sbjct: 60  KFFVGPVIEDGFYYDFRVESKIGEEDLVKIEKKMKELAEAKIEISKYEITKNEALAKFQN 119

Query: 153 KKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDS 212
             +  K E+L  IP    V++Y+QGE+ DLCRGPHV +T +  +FFKL +VAGAY  GD 
Sbjct: 120 --DDLKQEVLLRIPDG-AVSIYKQGEFEDLCRGPHVPNT-KFLRFFKLTRVAGAYLGGDE 175

Query: 213 NRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRK 271
            R ML+RIYGTA+  ++ L +YL  +EE++KRDHRKL  E+ LF   ++ G G+  W   
Sbjct: 176 KREMLTRIYGTAFADKESLKEYLTIIEEAKKRDHRKLGTELKLFTFDDEIGGGLPIWLSN 235

Query: 272 GWKIFQTL--ISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
           G ++   L  I Y   +++  YE +  P++L    W+ SGH+ +Y+ NM+  +       
Sbjct: 236 GARLRSKLEHILYKIHRLRG-YEPVRGPELLKADAWKISGHYANYKENMYFTQI------ 288

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
           D + + +KPMNC GH+ ++   ++SYR+LP++  E+G V+R+E SG LHGL RVR FTQD
Sbjct: 289 DEQEYGIKPMNCVGHIKIYQSDVRSYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFTQD 348

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMK 449
           DAH+FC   Q+  + L+I   + ++ K F F   M ++ST+PEK +G D +W+ A   +K
Sbjct: 349 DAHIFCMPSQIKEQVLEILAFVDNLMKLFDFSYEM-EISTKPEKAIGDDEIWEVATKALK 407

Query: 450 GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAF 509
             LD      +  +  G+  G GAFYGPK +  + DA+ R WQCGTIQVDFNLPSRF   
Sbjct: 408 EALD------EQGLKYGIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDFNLPSRFKLE 461

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQ 569
           Y +S +EK  PVM+HRA+ GS ERFIGI+ E+  G  P +++P    +  I  + + YA+
Sbjct: 462 YTDSDNEKKQPVMLHRAILGSFERFIGILTEHCAGEFPFFIAPTAVGIVPIGEAHIAYAK 521

Query: 570 EIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           EI   L   ++  E   +NE+++ KIR    +K+P+I++ GD E ++RS+ +R   +   
Sbjct: 522 EIQKELLELNIDSEVYEKNESLSKKIRTAEKQKLPMILVLGDDEVAKRSVALRDRRAKEQ 581

Query: 630 QKVSLLDAIPILTKESL 646
           + +S LD    L KE +
Sbjct: 582 KNLS-LDEFIKLVKEKM 597


>gi|239978444|ref|ZP_04700968.1| threonyl-tRNA synthetase [Streptomyces albus J1074]
          Length = 655

 Score =  467 bits (1202), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 261/656 (39%), Positives = 377/656 (57%), Gaps = 56/656 (8%)

Query: 19  VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIRHSC 77
           V  TG+  A+  +    +  +A  ++G++ DL+    +G S+E +       L ++RHS 
Sbjct: 13  VVTTGTTAADLFAGE--RTVIAARVDGELKDLAYVPGDGESVEPVDISSGDGLDILRHST 70

Query: 78  AHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFL 137
           AH+MA+AVQ ++PE ++ IGP ++ GFYYDFD  +PF+ ++L ++EKKMQEI  R   F 
Sbjct: 71  AHVMAQAVQELFPEAKLGIGPPVKGGFYYDFDVAEPFTPEDLKRVEKKMQEIQKRGQRFS 130

Query: 138 KQYLSHEKARELFESKKEAYKVEILESIPAKEN----------------VTLY-----RQ 176
           ++  + E AR   E   E YK+E+   I  K N                +T+Y     + 
Sbjct: 131 RRVTTDEDARA--ELAGEPYKLEL---IGLKGNAAQAADGADAEVGGGELTIYDNLDAKT 185

Query: 177 GE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
           GE  W DLCRGPH+ +T  +  F KLM+ A AYWRG    P L RIYGTAW +++EL  +
Sbjct: 186 GELCWKDLCRGPHLPTTRNIPAF-KLMRSAAAYWRGSEKNPQLQRIYGTAWPSKEELKAH 244

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYE 292
           L FL E+EKRDHRKL  E+DLF   ++ G G+  +H KG  + + + +Y RR+ +D  YE
Sbjct: 245 LEFLAEAEKRDHRKLGTELDLFSFPDELGPGLAVFHPKGGVVRKEMENYSRRRHEDAGYE 304

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
            +NTP +  +HL++ SGH  +Y   MF     D      + + LK MNCP H  +F    
Sbjct: 305 FVNTPHISKEHLFETSGHLPNYSEGMFPPIEFDG-----QNYRLKAMNCPMHNLIFKGRG 359

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
           +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDD+H++CTKEQM  E   +   ++
Sbjct: 360 RSYRELPLRLFEFGTVYRYEKSGVVHGLTRSRGFTQDDSHIYCTKEQMPEELDSLLTFVL 419

Query: 413 SIYKDFGFEKIMVKLSTR-PE--KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL 469
            + +D+G  +  ++LSTR PE  K +G DA W++A   ++          Q     G+ L
Sbjct: 420 DLLRDYGLNQFELELSTRDPESDKFIGEDAEWEEATEALR----------QAAEKQGLPL 469

Query: 470 ----GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
               G  A+YGPK     KDAIGR WQ  TIQVDF  P RF   Y  +   +  PVMIHR
Sbjct: 470 VPDPGGAAYYGPKISVQAKDAIGRSWQMSTIQVDFQQPKRFGLEYTAADGSRQQPVMIHR 529

Query: 526 AVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD 585
           A+FGSIERF  +++E++ G  P WL+P+QA+   I  + V Y QE A   K+  L +E D
Sbjct: 530 ALFGSIERFFAVLLEHYAGAFPAWLAPVQAVGIPIGDAHVSYLQEFAADAKARGLRVEVD 589

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
             ++ +  KIR H   K+P +II GD++ +  ++  R    +    +   DA+  L
Sbjct: 590 SSSDRMQKKIRNHQKAKVPFMIIVGDEDMNAGTVSFRYRDGSQENGIPREDALAKL 645


>gi|22299745|ref|NP_682992.1| threonyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
 gi|73919834|sp|Q8DGW0|SYT_THEEB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|22295929|dbj|BAC09754.1| threonyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
          Length = 605

 Score =  467 bits (1202), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 239/581 (41%), Positives = 355/581 (61%), Gaps = 16/581 (2%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           L  IRH+ +HI+A AVQ ++P+ QV IGP IE+GFYYDFD  +PFS  +L  IEK+M +I
Sbjct: 20  LKRIRHTTSHILAMAVQKLFPKAQVTIGPWIENGFYYDFDHPEPFSEKDLRLIEKEMVKI 79

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG-EWFDLCRGPHV 188
           I R  P +++ ++ E+A     +  E YK+EIL+ +  +E +T+Y  G EW+DLC GPHV
Sbjct: 80  IKRKLPVIREEVTREEAERRIRALGEPYKLEILQDL--EEPITIYHLGDEWWDLCAGPHV 137

Query: 189 RSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHR 247
            +TG++  K   L  VAGAYWRGD  +  L RIYGTAW T ++L +Y    EE+ +RDHR
Sbjct: 138 ENTGEIDPKAIALESVAGAYWRGDETKAQLQRIYGTAWETPEQLAEYKRRKEEALRRDHR 197

Query: 248 KLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLW 305
           K+ +E+ LF  A+  G G+  W  +G  +  TL  ++++ ++K  Y  + TP +    L+
Sbjct: 198 KVGKELGLFIFADPVGPGLPLWTPRGTVLRSTLEDFLKKEQLKRGYLPVVTPHIARVDLF 257

Query: 306 QQSGHWDSYRANMFAV-KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           + SGHW  Y+ +MF +     +     + F LKPMNCP H+ ++   L+SYR+LP+RLAE
Sbjct: 258 KTSGHWQKYKEDMFPLMAEDAEAAAHEQGFVLKPMNCPFHIQIYKSELRSYRDLPLRLAE 317

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FG+VYR E SG L GL RVRGFT DD+H+F T EQ+  E L + +LI+++++     K  
Sbjct: 318 FGTVYRYEQSGELGGLTRVRGFTVDDSHLFVTPEQLDAEFLNVVDLILTVFRCLRLNKFK 377

Query: 425 VKLSTR---PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            +LS R    +K +GSD  W  AE  ++  ++ +       +   + +GE AFYGPK ++
Sbjct: 378 ARLSFRDPKSDKYIGSDEAWSKAEAAIQRAVEQLG------MEHFLGIGEAAFYGPKLDF 431

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
           I +DA+GR+WQ GT+QVD+NLP RF+  YV   + +  PVMIHRA FGS+ER IGI+IE 
Sbjct: 432 IFEDALGREWQLGTVQVDYNLPERFDLEYVAEDNTRRRPVMIHRAPFGSLERLIGILIEE 491

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G+ P WL+P Q  +  +      YA+ +A  L+   + +  D   + +  +IR    +
Sbjct: 492 YAGDFPFWLAPEQVRLLPVGDEQRPYAERVAAQLRERGVRVSVDRSGDRLGKQIRNAETQ 551

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           KIP++ I G KE    ++ IR   +      +L   I  LT
Sbjct: 552 KIPVMGIIGAKEVEHETVSIRTRAAGDVGTFALEHLIAKLT 592


>gi|32477337|ref|NP_870331.1| threonyl-tRNA synthetase [Rhodopirellula baltica SH 1]
 gi|32447888|emb|CAD77406.1| threonyl-tRNA synthetase [Rhodopirellula baltica SH 1]
          Length = 830

 Score =  467 bits (1202), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 261/708 (36%), Positives = 387/708 (54%), Gaps = 74/708 (10%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS----- 58
           ++++  PDGS+K  P  AT  DVA+ IS  LA+  VA  ++G + D   P+ E +     
Sbjct: 103 EVQVRLPDGSLKTQPADATAMDVAKEISEGLARSVVAAEVDGTIVDSFRPLGEIADDENV 162

Query: 59  --IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSS 116
             + ++T  D  +L V+RHS AH+MA A+  I+  V +A GP    GFYYDFD  +  S 
Sbjct: 163 VPLRLLTTRDESALDVLRHSAAHVMARAIMRIYKGVSLAFGPTTSGGFYYDFDMPEKISE 222

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES-IPAKENVTLYR 175
           D+  +IE ++++II    PF +  L  ++AR+L +   +  KVE +E+ +  +  V+ YR
Sbjct: 223 DDFPKIEAEIKKIIKAKEPFERFVLERDEARKLCDDLDQDLKVEHIETGLGDQATVSFYR 282

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
           QGE+ DLCRGPH+   G +K   KL+ VAGAYW+GD++   L R+YGTA+  ++EL  YL
Sbjct: 283 QGEFVDLCRGPHIPHAGMIKAI-KLLSVAGAYWKGDASGRQLQRVYGTAFFDKKELASYL 341

Query: 236 YFLEESEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEE 293
             +EE+++RDHR L ++  LF I  E G G+  W  KG ++  TL  ++RR++    Y+ 
Sbjct: 342 EQIEEAKRRDHRVLGKQHGLFAINPEVGQGLCLWLPKGARVRVTLEDFLRRELLSRGYDP 401

Query: 294 INTPQVLDQHLWQQSGHWDSYR-------------------------------------- 315
           + +P +    +++ SGH+  YR                                      
Sbjct: 402 VYSPHIGRVEMYETSGHFPYYRDSQFAPLFGSEVGGLLDAWSTRLDKDDLSKDDEDKLIA 461

Query: 316 -ANMFAVKCAD-------DTIKDL--------RTFALKPMNCPGHVAVFNHGLKSYRELP 359
            A +F VK  D       D  KD+          + LKPMNCP H  +F    +SYR+LP
Sbjct: 462 AAEVFGVKLPDYKPSASNDAKKDVLHRWQLNHERYLLKPMNCPHHCQIFGAQPRSYRQLP 521

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +RL EFG+VYR+E +G L+G+MRVRG TQDDAH+FCT +Q+  E      L   + +  G
Sbjct: 522 LRLFEFGTVYRHEQTGELNGMMRVRGLTQDDAHIFCTADQVEEEFRATIELTKFVLESVG 581

Query: 420 FEKIMVKLSTR---PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
            +   V+LS R     K VGS+  WD AE  ++GVL+      Q  ++     GE AFYG
Sbjct: 582 LDDYRVQLSLRDPDSSKYVGSEENWDHAEGALRGVLE------QSGLSFNEEPGEAAFYG 635

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK +++++D IGR WQ GT+Q+D+NLP RF   Y  + +    PVMIHRA FGS+ERF G
Sbjct: 636 PKADFMVRDCIGRSWQLGTVQLDYNLPERFKLEYKGNDNATHRPVMIHRAPFGSLERFTG 695

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           ++IE+F G  P+WLSP Q  V  ++  +VEYA  +A  L      +  D  +  +  KIR
Sbjct: 696 MLIEHFAGAFPMWLSPEQIRVLPLSDKSVEYATAVAKQLDEAGFKVTVDASDGKVQAKIR 755

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
              I  +  + + G KEA    + +R         + + +AI  L KE
Sbjct: 756 NAQIDLVNYMAVVGPKEAESGQVALRDRIEGDLGSMPIKEAIARLQKE 803


>gi|226306390|ref|YP_002766350.1| threonyl-tRNA synthetase [Rhodococcus erythropolis PR4]
 gi|259516659|sp|C0ZZ26|SYT_RHOE4 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|226185507|dbj|BAH33611.1| threonyl-tRNA synthetase [Rhodococcus erythropolis PR4]
          Length = 685

 Score =  467 bits (1201), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 247/632 (39%), Positives = 376/632 (59%), Gaps = 46/632 (7%)

Query: 45  GKVCDLS-DPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG 103
           G + DLS  P  +  +E +        +VIRHS AH++A+AVQ  +P+ ++ IGP I+DG
Sbjct: 46  GTLKDLSWTPEVDVDVEPVAASTEDGRSVIRHSAAHVLAQAVQKEFPDAKLGIGPPIKDG 105

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYL-SHEKARELFESKKEAYKVEIL 162
           FYYDF  ++PF+ ++LA++EK+M++II     F ++ + S E AR   E   E +K+E++
Sbjct: 106 FYYDFAVDRPFTPEDLAKLEKRMKQIIKGSQRFSRRVVDSIEDAR--VELADEPFKLELI 163

Query: 163 ESIPAKEN----------VTLY-----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAG 205
           +     ++          +T+Y     R G+  W DLCRGPH+ +T  +  F KL + + 
Sbjct: 164 DDKSGIDDPEIMEVGGNELTIYDNLDPRTGDKIWSDLCRGPHIPTTKHIPAF-KLTRSSA 222

Query: 206 AYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSG 264
           AYWRG+ +   L R+YGTAW + +   +YL  L E+E+RDHRKL  E+DLF   ++ GSG
Sbjct: 223 AYWRGNQDNADLQRVYGTAWESTEAQDEYLELLAEAERRDHRKLGTELDLFSFPDELGSG 282

Query: 265 VIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKC 323
           +  +H KG  I   + +Y R R I+  YE +NTP +   HL++ SGH D YR  MF    
Sbjct: 283 LPVFHPKGGIIRTEMENYSRSRHIEAGYEFVNTPHITKGHLYEVSGHLDWYRDGMFPAMH 342

Query: 324 ADDTIKDLRT-------FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            D+ + +  T       + LKPMNCP H  +F    +SYRELP+RL EFGSVYR E SG 
Sbjct: 343 VDEELNEDGTVRKPGQDYYLKPMNCPMHNLIFRARGRSYRELPLRLFEFGSVYRYEKSGV 402

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR-PEKRV 435
           +HGL RVRG TQDDAH++CT+EQM +E       ++++ KD+G +   ++LST+ P+K V
Sbjct: 403 IHGLTRVRGMTQDDAHIYCTREQMRDELTTTLQFVLNLLKDYGLDDFYLELSTKNPDKFV 462

Query: 436 GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL----GEGAFYGPKFEYILKDAIGRDW 491
           GSD +W++A   +  V +           +G+ L    G  AFYGPK    +KDA+GR W
Sbjct: 463 GSDDVWEEATATLAEVGEA----------SGLTLVPDPGGAAFYGPKISVQVKDALGRTW 512

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLS 551
           Q  TIQ+DFNLP RF   Y  +   K  PVMIHRA+FGSIERF G++ E++ G  P WL+
Sbjct: 513 QMSTIQLDFNLPERFELEYTGNDGVKTRPVMIHRALFGSIERFFGVLTEHYAGAFPAWLA 572

Query: 552 PIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
           P+Q +   +  +  ++  ++   LK+  +  E DF ++ +  KIR H+ +K+P +++ G+
Sbjct: 573 PVQVVGIPVAEAFADHLFDVTKKLKAAGVRAEVDFSDDRMQKKIRNHTTQKVPFMLLAGE 632

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           ++    ++  R    T    + + DA+ I+T+
Sbjct: 633 RDVEAGAVSFRFRDGTQINGIPVDDAVRIITE 664


>gi|153950997|ref|YP_001397450.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. doylei
           269.97]
 gi|166223330|sp|A7H1S0|SYT_CAMJD RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|152938443|gb|ABS43184.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. doylei
           269.97]
          Length = 602

 Score =  466 bits (1200), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 251/617 (40%), Positives = 379/617 (61%), Gaps = 24/617 (3%)

Query: 34  LAKKAVAVAINGKVCDLSDPVREGSI-EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEV 92
           + K+ +A   N  + D S  V+  ++ EI       SL VIRHSCAH+MA+A++S++PE 
Sbjct: 1   MEKEVIAYLDNETIID-SQSVKNTNLKEIYFDNSKESLEVIRHSCAHLMAQAIKSLYPEA 59

Query: 93  QVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFES 152
           +  +GP+IEDGFYYDF  E     ++L +IEKKM+E+        K  ++  +A   F++
Sbjct: 60  KFFVGPVIEDGFYYDFCVESKIGEEDLVKIEKKMKELAEAKIEISKYKITKNEALAKFQN 119

Query: 153 KKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDS 212
             +  K E+L  IP    V++Y+QGE+ DLCRGPHV +T +  +FFKL +VAGAY  GD 
Sbjct: 120 --DDLKQEVLLRIPDG-AVSIYKQGEFEDLCRGPHVPNT-KFLRFFKLTRVAGAYLGGDE 175

Query: 213 NRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRK 271
            R ML+RIYGTA+  ++ L +YL  +EE++KRDHRKL  E+ LF   ++ G G+  W   
Sbjct: 176 KREMLTRIYGTAFADKESLKEYLAIIEEAKKRDHRKLGIELKLFTFNDEIGGGLPIWLGN 235

Query: 272 GWKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
           G ++ ++ + +M  KI     YE +  P++L    W+ SGH+ +Y+ NM+  +       
Sbjct: 236 GARL-RSKLEHMLYKIHRLRGYEPVRGPELLKADAWKISGHYANYKENMYFTQI------ 288

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
           D + + +KPMNC GH+ V+   ++SYR+LP++  E+G V+R+E SG LHGL RVR FTQD
Sbjct: 289 DEQEYGIKPMNCVGHIKVYQSDVRSYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFTQD 348

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMK 449
           DAH+FC   Q+  + L+I   + ++ K F F   M ++ST+PEK +G D +W+ A   +K
Sbjct: 349 DAHIFCMPSQIKEQVLEILAFVDNLMKLFDFSYEM-EISTKPEKAIGDDEIWEVATKALK 407

Query: 450 GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAF 509
             LD      +  +  G+  G GAFYGPK +  + DA+ R WQCGTIQVDFNLPSRF   
Sbjct: 408 EALD------EQGLKYGIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDFNLPSRFKLE 461

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQ 569
           Y +S +EK  PVM+HRA+ GS ERFIGI+ E+  G  P +++P    +  I  + + YA+
Sbjct: 462 YTDSDNEKKQPVMLHRAILGSFERFIGILTEHCAGEFPFFIAPTAVGIVPIGEAHIAYAK 521

Query: 570 EIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           EI   L   ++  E   +NE+++ KIR    +K+P+I++ GD E ++RS+ +R   +   
Sbjct: 522 EIQKELLELNIDSEVYEKNESLSKKIRIAEKQKLPMILVLGDDEVAKRSVALRDRRAKEQ 581

Query: 630 QKVSLLDAIPILTKESL 646
           + +S LD    L KE +
Sbjct: 582 KNLS-LDEFIKLVKEKM 597


>gi|86151198|ref|ZP_01069413.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|85841545|gb|EAQ58792.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           260.94]
          Length = 602

 Score =  466 bits (1200), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 250/617 (40%), Positives = 379/617 (61%), Gaps = 24/617 (3%)

Query: 34  LAKKAVAVAINGKVCDLSDPVREGSI-EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEV 92
           + K+ +A   N  + D S  V+  ++ EI       SL VIRHSCAH+MA+A++S++PE 
Sbjct: 1   MEKEVIAYLDNETIID-SQSVKNTNLKEIYFDNSKESLEVIRHSCAHLMAQAIKSLYPEA 59

Query: 93  QVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFES 152
           +  +GP+IEDGFYYDF  E     ++L +IEKKM+E+       LK  ++  +A   F++
Sbjct: 60  KFFVGPVIEDGFYYDFRVESKIGEEDLVKIEKKMKELAEAKIEILKYEITKNEALAKFQN 119

Query: 153 KKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDS 212
             +  K E+L  IP    V++Y+QGE+ DLCRGPHV +T +  +FFKL +VAGAY  GD 
Sbjct: 120 --DDLKQEVLLRIPDG-AVSIYKQGEFEDLCRGPHVPNT-KFLRFFKLTRVAGAYLGGDE 175

Query: 213 NRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRK 271
            R ML+RIYGTA+  ++ L +YL  +EE++KRDHRKL  E+ LF   ++ G G+  W   
Sbjct: 176 KREMLTRIYGTAFADKESLKEYLTIIEEAKKRDHRKLGTELKLFTFDDEIGGGLPIWLSN 235

Query: 272 GWKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
           G ++ ++ + +M  KI     YE +  P++L    W+ SGH+ +Y+ NM+  +       
Sbjct: 236 GARL-RSKLEHMLYKIHRLRGYEPVRGPELLKADAWKISGHYANYKENMYFTQI------ 288

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
           D + + +KPMNC GH+ ++   ++SYR+LP++  E+G V+R+E SG LHGL RVR FTQD
Sbjct: 289 DEQEYGIKPMNCVGHIKIYQSDVRSYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFTQD 348

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMK 449
           DAH+FC   Q+  + L+I   + ++ K F F   M ++ST+PEK +G D +W+ A   +K
Sbjct: 349 DAHIFCMPSQIKEQVLEILAFVDNLMKLFDFSYEM-EISTKPEKAIGDDEIWEIATKALK 407

Query: 450 GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAF 509
             LD      +  +  G+  G GAFYGPK +  + DA+ R WQCGTIQVDFNLPS F   
Sbjct: 408 EALD------EQGLKYGIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDFNLPSCFKLE 461

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQ 569
           Y +S +EK  PVM+HRA+ GS ERFIGI+ E+  G  P +++P    +  I  + + YA+
Sbjct: 462 YTDSDNEKKQPVMLHRAILGSFERFIGILTEHCAGEFPFFIAPTAVGIVPIGEAHIAYAK 521

Query: 570 EIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           EI   L   ++  E   +NE+++ KIR    +K+P+I++ GD E ++RS+ +R   +   
Sbjct: 522 EIQKELLELNIDSEVYEKNESLSKKIRIAEKQKLPMILVLGDDEVAKRSVALRDRRAKEQ 581

Query: 630 QKVSLLDAIPILTKESL 646
           + +S LD    L KE +
Sbjct: 582 KNLS-LDEFIKLVKEKM 597


>gi|332708267|ref|ZP_08428248.1| threonyl-tRNA synthetase [Lyngbya majuscula 3L]
 gi|332352932|gb|EGJ32491.1| threonyl-tRNA synthetase [Lyngbya majuscula 3L]
          Length = 605

 Score =  466 bits (1200), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 234/580 (40%), Positives = 361/580 (62%), Gaps = 22/580 (3%)

Query: 69  SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQE 128
           +L  +RH+ +H+MA AVQ ++P+ QV IGP IE+GFYYDFD+ +PF+  +L +I+K+M +
Sbjct: 23  TLKRLRHTTSHVMAMAVQKLFPKAQVTIGPWIENGFYYDFDQPEPFTEQDLKKIQKEMVK 82

Query: 129 IIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG-EWFDLCRGPH 187
           II R  P +++ +  E+A++  +   E YK+EIL  +  ++ +++Y  G +W+DLC GPH
Sbjct: 83  IIKRKLPVIREEVPREEAQQRIKELGEPYKLEILADL--EDPISIYHLGDQWWDLCAGPH 140

Query: 188 VRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDH 246
           V +T ++  K  +L  VAGAYWRGD++   L RIYGTAW   ++L +Y    +E+ KRDH
Sbjct: 141 VENTSEINPKAIELESVAGAYWRGDASNAQLQRIYGTAWENPEQLQEYKRRKQEALKRDH 200

Query: 247 RKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHL 304
           RKL +E+ LF  ++  G G+  W  KG  +   L  ++++ ++K  Y  + TP +    L
Sbjct: 201 RKLGKELGLFIFSDPVGPGLPLWTPKGTVLRTLLEDFLKQEQVKRGYLPVVTPHIGRVDL 260

Query: 305 WQQSGHWDSYRANMFAV-KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           ++ SGHW +Y+ +MF +    ++     + F LKPMNCP H+ ++   L+SYRELP+RLA
Sbjct: 261 FKVSGHWQNYKEDMFPMMAEDEEAAAAEQGFVLKPMNCPFHIQIYKSELRSYRELPMRLA 320

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFG+VYR E SG L GL RVRGFT DD+H+F   +Q+  E L + +LI+S++K    +  
Sbjct: 321 EFGTVYRYEQSGELGGLTRVRGFTVDDSHLFVMPDQLDQEFLSVVDLILSVFKSLQMKNF 380

Query: 424 MVKLSTR---PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
             +LS R    +K +GSD  W+ A++ ++  +DT+   S +        GE AFYGPK +
Sbjct: 381 KARLSFRDPASDKYIGSDQAWEKAQSAIRRAVDTLGMESFE------APGEAAFYGPKLD 434

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           +I +D + R+WQ GT+QVD+NLP RF+  YV     +  P+MIHRA FGS+ER  GI+IE
Sbjct: 435 FIFQDILDREWQLGTVQVDYNLPERFDLEYVAEDGTRQRPIMIHRAPFGSLERLTGILIE 494

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
            + G+ P WL+P+QA +  +  + + +AQE+A  ++SH +  E D   E +   IR    
Sbjct: 495 QYGGDFPFWLAPVQARLLPVGDAQLPFAQEVAAKMRSHGIRAEVDTSGERLGKAIRNAEK 554

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
            KIP++ + G KE    S+ IR      T+    L  +PI
Sbjct: 555 AKIPVMSVVGAKEVEANSLNIR------TRAAGELGMMPI 588


>gi|118618602|ref|YP_906934.1| threonyl-tRNA synthetase [Mycobacterium ulcerans Agy99]
 gi|166225468|sp|A0PSZ4|SYT_MYCUA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|118570712|gb|ABL05463.1| threonyl-tRNA synthetase ThrS [Mycobacterium ulcerans Agy99]
          Length = 691

 Score =  466 bits (1200), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 250/629 (39%), Positives = 368/629 (58%), Gaps = 39/629 (6%)

Query: 29  SISRSLAKKAVAVA--INGKVCDLS-DPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAV 85
            + R  A  A+ V     GK+ DLS  P  +  +  I        +VIRHS AH++A+AV
Sbjct: 36  GLPRRGAPDAIVVVRDAEGKLRDLSWVPDADAEVTPIAANTDDGRSVIRHSTAHVLAQAV 95

Query: 86  QSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQ-YLSHE 144
           Q ++P+ ++ IGP I DGFYYDF+  +PF+ D+L  +EK+M++I+     F ++ + S +
Sbjct: 96  QDLFPQAKLGIGPPITDGFYYDFEVLEPFTPDDLQALEKRMRQIVKEGQLFDRRVFESKD 155

Query: 145 KARELFESKKEAYKVEILESIPAKENV--------TLY-------RQGEWFDLCRGPHVR 189
           +ARE  E   E YKVE+++      +V        T Y       R+  W DLCRGPH+ 
Sbjct: 156 QARE--ELANEPYKVELVDDKSGDPDVMEVGGDELTAYDNLNPRTRERVWGDLCRGPHIS 213

Query: 190 STGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKL 249
           +T  +  F KL + + AYWRGD     L RIYGTAW +Q+ L  ++  +EE+++RDHRKL
Sbjct: 214 TTKHIPAF-KLTRSSAAYWRGDQKNASLQRIYGTAWESQEALDTHIELIEEAQRRDHRKL 272

Query: 250 AREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQ 307
             E+DLF   ++ GSG+  +H KG  + + L  Y RRK  +  Y+ +N+P +    L+  
Sbjct: 273 GVELDLFSFPDEIGSGLAVFHPKGGIVRRELEDYSRRKHTEAGYQFVNSPHITKAQLFHT 332

Query: 308 SGHWDSYRANMF------AVKCADDTI-KDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           SGH D Y   MF      A    D T+ K  + + LKPMNCP H  +F    +SYRELP+
Sbjct: 333 SGHLDWYADGMFPPMQIDAEYNTDGTVRKPGQDYYLKPMNCPMHCLIFRARGRSYRELPL 392

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RL EFG+VYR E SG +HGL RVRG T DDAH+FCT+EQM +E   +   ++ +  D+G 
Sbjct: 393 RLFEFGTVYRYEKSGVVHGLTRVRGLTMDDAHIFCTREQMRDELRSLLRFVLDLLSDYGL 452

Query: 421 EKIMVKLSTR-PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
               ++LST+ P+K VGSD +W++A N++  V       ++  +      G  AFYGPK 
Sbjct: 453 TDFYLELSTKDPDKFVGSDEVWEEATNVLAEV------GAESSLELVPDPGGAAFYGPKI 506

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
              +KDA+GR WQ  TIQ+DFN P RF   Y  +   +  PVMIHRA+FGSIERF GI+ 
Sbjct: 507 SVQVKDALGRTWQMSTIQLDFNFPERFGLEYTAADGTRQRPVMIHRALFGSIERFFGILT 566

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E++ G  P WL+P+QA+   +    + Y  ++A  LKSH + +E D  ++ +  KI  H+
Sbjct: 567 EHYAGAFPAWLAPVQAVGIPVADEHIAYLGQVAAQLKSHGVRVEVDTSDDRMAKKIVHHT 626

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTT 628
            +K+P +++ GD++    ++   RFG  T
Sbjct: 627 NQKVPFMLLAGDRDVQADAVSF-RFGDRT 654


>gi|301303993|ref|ZP_07210111.1| threonyl-tRNA synthetase [Escherichia coli MS 124-1]
 gi|300840790|gb|EFK68550.1| threonyl-tRNA synthetase [Escherichia coli MS 124-1]
          Length = 429

 Score =  466 bits (1199), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 209/408 (51%), Positives = 289/408 (70%), Gaps = 13/408 (3%)

Query: 216 MLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKI 275
           ML RIYGTAW  ++ L  YL  LEE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW I
Sbjct: 1   MLQRIYGTAWADKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTI 60

Query: 276 FQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           F+ L  ++R K+K+  Y+E+  P ++D+ LW+++GHWD+Y+  MF       T  + R +
Sbjct: 61  FRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFT------TSSENREY 114

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
            +KPMNCPGHV +FN GLKSYR+LP+R+AEFGS +RNEPSGSLHGLMRVRGFTQDDAH+F
Sbjct: 115 CIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIF 174

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDT 454
           CT+EQ+ +E      L+  +Y  FGFEKI+VKLSTRPEKR+GSD +WD AE  +   L+ 
Sbjct: 175 CTEEQIRDEVNGCIRLVYDMYSTFGFEKIVVKLSTRPEKRIGSDEMWDRAEADLAVALE- 233

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH 514
                ++ I     LGEGAFYGPK E+ L D + R WQCGT+Q+DF+LPSR +A YV   
Sbjct: 234 -----ENNIPFEYQLGEGAFYGPKIEFTLYDCLDRAWQCGTVQLDFSLPSRLSASYVGED 288

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANL 574
           +E+  PVMIHRA+ GS+ERFIGI+ E F G  P WL+P+Q ++  IT S  +Y  E+   
Sbjct: 289 NERKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVIMNITDSQSDYVNELTQK 348

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           L +  + ++ D RNE I +KIREH+++++P +++CGDKE     + +R
Sbjct: 349 LSNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVR 396


>gi|57168347|ref|ZP_00367481.1| threonyl-tRNA synthetase [Campylobacter coli RM2228]
 gi|57020155|gb|EAL56829.1| threonyl-tRNA synthetase [Campylobacter coli RM2228]
          Length = 602

 Score =  466 bits (1199), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 246/616 (39%), Positives = 375/616 (60%), Gaps = 22/616 (3%)

Query: 34  LAKKAVAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQ 93
           + K+ +A   + K+ D          EI       SL VIRHSCAH+MA+A++S++PE +
Sbjct: 1   MEKEVIAYLDDEKIVDSQSKNSIDLKEIYFDNSKESLEVIRHSCAHLMAQAIKSLYPEAK 60

Query: 94  VAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESK 153
             +GP+IEDGFYYDF        ++LA+IEKKM+E++       K  ++  +A   F  K
Sbjct: 61  FFVGPVIEDGFYYDFRVNSKIGEEDLAKIEKKMKELVEAKQEIEKYEITKNEAIAKF--K 118

Query: 154 KEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSN 213
            +  K E+L  IP  + V++Y+QGE+ DLCRGPHV +T  ++ F  L +VAGAY  GD  
Sbjct: 119 DDDLKQEVLLRIPDGK-VSIYKQGEFEDLCRGPHVPNTKFLRNF-SLTRVAGAYLGGDEK 176

Query: 214 RPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKG 272
           R ML+RIYGTA+  ++ L ++L  +EE++KRDHRKL  E+ LF   ++ G G+  W   G
Sbjct: 177 REMLTRIYGTAFADKESLKEHLRIIEEAKKRDHRKLGTELKLFTFDDEIGGGLPIWLSNG 236

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ ++ + +M  KI     YE +  P++L    W+ SGH+ +Y+ NM+  +       D
Sbjct: 237 ARL-RSKLEHMLYKIHRLRGYEPVRGPELLKADAWKISGHYANYKENMYFTQI------D 289

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
            + + +KPMNC GH+ ++   ++SYR+LP++  E+G V+R+E SG LHGL RVR FTQDD
Sbjct: 290 EQEYGIKPMNCVGHIKIYQSDVRSYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFTQDD 349

Query: 391 AHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKG 450
           AH+FC   Q+  + L+I   + ++ K F F   M ++ST+P K +G D +WD A   +K 
Sbjct: 350 AHIFCMPSQIKEQVLEILAFVDNLMKLFDFSYEM-EISTKPAKAIGDDEIWDTATKALKE 408

Query: 451 VLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFY 510
            LD      +  +  G+  G GAFYGPK +  + DA+ R WQCGTIQVDFNLP RF   Y
Sbjct: 409 ALD------EQGLKYGIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDFNLPERFKLEY 462

Query: 511 VNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQE 570
            +S++EK  PVM+HRA+ GS ERFIGI+ E+  G  P +++P    +  I+ S + YA+E
Sbjct: 463 TDSNNEKKQPVMLHRAILGSFERFIGILTEHCAGEFPFFIAPTAVGIVPISDSHIAYAKE 522

Query: 571 IANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
           I   L   ++  E   +NE+++ KIR    +K+P+I++ GD+E ++RS+ +R   +   +
Sbjct: 523 IQRALLELNIDSEVYEKNESLSKKIRTAEKQKLPMILVLGDEEVAKRSVALRDRRAKEQK 582

Query: 631 KVSLLDAIPILTKESL 646
            +S LD    L KE +
Sbjct: 583 NLS-LDEFIKLVKEKM 597


>gi|296454199|ref|YP_003661342.1| threonyl-tRNA synthetase [Bifidobacterium longum subsp. longum
           JDM301]
 gi|296183630|gb|ADH00512.1| threonyl-tRNA synthetase [Bifidobacterium longum subsp. longum
           JDM301]
          Length = 677

 Score =  466 bits (1199), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 255/637 (40%), Positives = 371/637 (58%), Gaps = 51/637 (8%)

Query: 36  KKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           K  +AV ING+  DL  P+ EG +++ I  +    LA++RHS  H+MA+AVQ ++P  ++
Sbjct: 31  KNIIAVKINGENRDLYTPLNEGDTVDPIALDSEDGLAIMRHSATHVMAQAVQEVYPNAKL 90

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            +GP+I+DGFYYDF  +QPF+ D+L  IEK+MQ II     F ++ ++ E+A  L E   
Sbjct: 91  GVGPVIKDGFYYDFQVDQPFTPDDLKDIEKRMQRIIKSSQSFRRRSVTEEEA--LKEEAD 148

Query: 155 EAYKVEILESIPA-----------KENVTLY----RQGE--WFDLCRGPHVRSTGQVKKF 197
           + +K+E++E   A           ++ ++ Y    R G   W DLCRGPH+ +T  +K F
Sbjct: 149 QPFKIELIEDKEAHLDPAAATEISEKELSFYDNVDRDGNVVWKDLCRGPHLPNTRYIKAF 208

Query: 198 FKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFH 257
            K+ + A AYWRG    P + RIYGTAW T+++L  Y   LEE+ KRDHRKL  EMDLF 
Sbjct: 209 -KIERSAAAYWRGSEKNPTMQRIYGTAWATKEDLKAYQTRLEEAAKRDHRKLGAEMDLFS 267

Query: 258 IAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYR 315
             ++ G G+  +H KG  +   +  Y R    K  Y  + TP +    L++ SGH   Y+
Sbjct: 268 FPDEIGPGLAVFHPKGAAVINAMEDYSREMHRKHHYSFVQTPHITKGGLYETSGHLHWYK 327

Query: 316 ANMFAV------KCADDTI-KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV 368
             M+        K AD  I K    + LKPMNCP H  +F    +SYRELP+RL EFG+V
Sbjct: 328 DGMYPPMHLDEEKDADGNITKPGADYYLKPMNCPMHNLIFKSRQRSYRELPLRLFEFGTV 387

Query: 369 YRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLS 428
           YR E SG +HGL RVRG TQDD+H++CT+EQM +E   +   ++++ KDFG     ++LS
Sbjct: 388 YRYEKSGEVHGLTRVRGLTQDDSHIYCTREQMKDELTSLLTFVLNLLKDFGLTDFYLELS 447

Query: 429 TR-PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAI 487
           T+ P K VGSD +W++A N +  V    K S+ + ++        AFYGPK     +DAI
Sbjct: 448 TKDPNKYVGSDEIWEEATNTLAEV---AKESNLELVDDPC---GAAFYGPKISVQARDAI 501

Query: 488 GRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           GR WQ  TIQ+DFNLP RF   Y+        PVMIHRA+FGSIERF  +++E++ G  P
Sbjct: 502 GRTWQVSTIQLDFNLPERFQLEYIAKDGTHQRPVMIHRALFGSIERFFAVLLEHYAGAFP 561

Query: 548 LWLSPIQAIVTTITSSAVEYAQEIANLLKS---HHLSIETDFRNETINYKIREHSIKKIP 604
            WL+P+Q +   +   A E+A  +A  +KS     +  E D+ ++    KIR  S  K+P
Sbjct: 562 AWLAPVQVLGVPV---ADEFAPHLAGFVKSLEDEMVRCEIDYSDDRFGKKIRNASKSKVP 618

Query: 605 IIIICGDKEASERSIGIR-RFGSTTTQKVSLLDAIPI 640
            I+I G+++ +  ++  R R GS        L+ +P+
Sbjct: 619 FILIVGEEDMNNNAVSFRFRDGSQ-------LNGVPV 648


>gi|330466868|ref|YP_004404611.1| threonyl-tRNA synthetase [Verrucosispora maris AB-18-032]
 gi|328809839|gb|AEB44011.1| threonyl-tRNA synthetase [Verrucosispora maris AB-18-032]
          Length = 666

 Score =  466 bits (1199), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 249/612 (40%), Positives = 358/612 (58%), Gaps = 44/612 (7%)

Query: 53  PVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ 112
           P  E  +E +  + P  L V+RHS AH++A+AVQ I+PE ++ IGP IE+GFYYDF  ++
Sbjct: 55  PAEETVVEPVALDSPDGLNVLRHSTAHVLAQAVQDIFPEAKLGIGPPIENGFYYDFAVDK 114

Query: 113 PFSSDELAQIEKKMQEIIARDSPFLKQ-YLSHEKARELFESKKEAYKVEIL----ESIPA 167
           PF  D+LA++EK+MQEII     F ++ + S ++A+   E   E +K+E++    E + +
Sbjct: 115 PFQPDDLAKLEKRMQEIIKSGQRFRRRRFDSLDEAK--VELAAEPFKLELIDVKGEGLDS 172

Query: 168 KE-------NVTLYRQGE-------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSN 213
            E        +T+Y           W DLCRGPH+ +T ++   FKLM+ A AYWRG   
Sbjct: 173 SEVMEVGGGELTIYDNLAATEDKVCWSDLCRGPHLPNT-RLIGAFKLMRSAAAYWRGSER 231

Query: 214 RPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKG 272
            P L R+YGTAW T+ EL  YL  LEE+ +RDHRKL  ++DLF   ++ GSG+  +H KG
Sbjct: 232 NPQLQRVYGTAWPTRDELKAYLKLLEEAARRDHRKLGVDLDLFSFPDELGSGLAVFHPKG 291

Query: 273 WKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
             I + + +Y R K +   YE +NTP +   HL++ SGH D Y   MF     +      
Sbjct: 292 GIIRREMENYSRLKHEQAGYEFVNTPHITKGHLYEVSGHLDWYADGMFPPMEVEGA---- 347

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
            ++ LKPMNCP H  +F    +SYRELP+R+ EFG+VYR E SG +HGL RVRG TQDDA
Sbjct: 348 -SYYLKPMNCPMHDLIFRSRGRSYRELPLRMFEFGTVYRYEKSGVVHGLTRVRGMTQDDA 406

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR-PEKRVGSDALWDDAENIMKG 450
           H+FCT+EQM  E   +   ++ + +D+G +   ++LSTR PEK VG+D  W+ A   ++ 
Sbjct: 407 HIFCTEEQMAGELKSLLAFVLELLRDYGLDDFYLELSTRNPEKSVGTDENWERATEALRS 466

Query: 451 VLDTIKNSSQDRINTGVLL----GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF 506
             +           +G+ L    G  AFYGPK    +KDAIGR WQ  TIQVDFNLP RF
Sbjct: 467 AAE----------ESGLTLVPDPGGAAFYGPKISVQVKDAIGRTWQMSTIQVDFNLPERF 516

Query: 507 NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVE 566
           N  Y  +   +  PVMIHRA+FGSIERF G++ E++ G  P WL+P+Q +   I     +
Sbjct: 517 NLEYQAADGTRQRPVMIHRALFGSIERFFGVLTEHYAGAFPAWLAPVQVVGIPIRDDHAD 576

Query: 567 YAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS 626
           Y       L++  +  + D  +E +  KIR    +KIP ++I GD + +  ++  R    
Sbjct: 577 YLHGFVAALRAEGIRAQVDSGDERMQKKIRNAQQQKIPFMVIAGDDDVAAGTVSFRYRDG 636

Query: 627 TTTQKVSLLDAI 638
           +    V L +A+
Sbjct: 637 SQRNGVPLAEAV 648


>gi|154148459|ref|YP_001406198.1| threonyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381]
 gi|171769701|sp|A7I107|SYT_CAMHC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|153804468|gb|ABS51475.1| threonyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381]
          Length = 609

 Score =  466 bits (1198), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 245/609 (40%), Positives = 368/609 (60%), Gaps = 33/609 (5%)

Query: 39  VAVAINGKVCDL----SDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           +A  ++G++ D     S    + + EI       +L VIRHSCAH+MA+A+ +++P  + 
Sbjct: 5   IAYKVDGEIVDTQSFKSLKNVKNAEEIYFDNSEDALKVIRHSCAHLMAQAILALYPNAKF 64

Query: 95  AIGPIIEDGFYYDF----DKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELF 150
            +GP IEDGFYYDF    +  +    ++L  IEKKM+E I       K  +   K+    
Sbjct: 65  FVGPAIEDGFYYDFRVTKENGEKLGKEDLQAIEKKMKEFIDAKEEIAK--ICSTKSEIAN 122

Query: 151 ESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRG 210
           E K +  K E+L+ IP  E V++Y+QG++ D+CRGPHV +T +  +FFKL +VAGAY  G
Sbjct: 123 EFKNDDLKQEVLKRIPDGE-VSVYKQGDFKDICRGPHVPNT-KFLRFFKLTRVAGAYLGG 180

Query: 211 DSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWH 269
           D  R ML+RIYGTA+  ++ L +YL  LEE++KRDHR +  EM LF   +  G+G+  W 
Sbjct: 181 DEKREMLTRIYGTAFADKENLNEYLRILEEAKKRDHRIIGNEMKLFTFDDQIGAGLPVWL 240

Query: 270 RKGW----KIFQTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD 325
             G     K+ + L    RR+    YE +  P++L    W+ SGH+ +Y+ NM+  K   
Sbjct: 241 PNGARMRSKLEKILFGVHRRR---GYEPVRGPEILKADAWKISGHYTNYKENMYFTKI-- 295

Query: 326 DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRG 385
               D + + +KPMNC GH+ V+   ++SYR+LP++  E+G V+R+E SG +HGL RVR 
Sbjct: 296 ----DEQEYGIKPMNCVGHIKVYQSEIRSYRDLPLKFFEYGVVHRHEKSGVMHGLFRVRE 351

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
           FTQDDAH+FC   Q+    L+I + +  I K+FGF   M ++ST+PEK +G D +W+ A 
Sbjct: 352 FTQDDAHIFCMPSQIKENVLEILDFVDKIMKNFGFSYEM-EISTKPEKAIGDDKVWEIAT 410

Query: 446 NIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSR 505
           N +K  LD      ++    G+  G GAFYGPK +  + DA+ R WQCGTIQVDFNLPSR
Sbjct: 411 NALKEALD------ENGFKYGIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDFNLPSR 464

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAV 565
           F+  Y++ ++E+  PVM+HRA+ GS ERFIGI+IE+  G LP +++P    +  I  + +
Sbjct: 465 FDLGYIDENNERKQPVMLHRAILGSFERFIGILIEHTAGELPFFIAPTGVSIIPINDAHL 524

Query: 566 EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
            YA+E+   L +  +  E   +NET+N +IR     ++P+I++ GD E   RS+ +R   
Sbjct: 525 NYAKEVQKALANLEVDSEILSKNETLNKRIRTAEKGRVPMILVLGDNEVKNRSVALRDRR 584

Query: 626 STTTQKVSL 634
           +     +SL
Sbjct: 585 ARAQSNLSL 593


>gi|215446866|ref|ZP_03433618.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis T85]
 gi|289758745|ref|ZP_06518123.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis T85]
 gi|289714309|gb|EFD78321.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis T85]
          Length = 692

 Score =  466 bits (1198), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 254/656 (38%), Positives = 377/656 (57%), Gaps = 45/656 (6%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVA--INGKVCDLS-DPVREGS 58
           PS  ++  P G+     V   G      + R     A+ V    +G + DLS  P  +  
Sbjct: 16  PSQARIRVPAGTTAATAVGEAG------LPRRGTPDAIVVVRDADGNLRDLSWVPDVDTD 69

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           I  +        +VIRHS AH++A+AVQ ++P+ ++ IGP I DGFYYDFD  +PF+ ++
Sbjct: 70  ITPVAANTDDGRSVIRHSTAHVLAQAVQELFPQAKLGIGPPITDGFYYDFDVPEPFTPED 129

Query: 119 LAQIEKKMQEIIARDSPFLKQ-YLSHEKARELFESKKEAYKVEILESIPAK--------E 169
           LA +EK+M++I+     F ++ Y S E+AR   E   E YK+E+++             +
Sbjct: 130 LAALEKRMRQIVKEGQLFDRRVYESTEQARA--ELANEPYKLELVDDKSGDAEIMEVGGD 187

Query: 170 NVTLY-------RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYG 222
            +T Y       R+  W DLCRGPH+ +T  +  F KL + + AYWRGD     L RIYG
Sbjct: 188 ELTAYDNLNPRTRERVWGDLCRGPHIPTTKHIPAF-KLTRSSAAYWRGDQKNASLQRIYG 246

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLIS 281
           TAW +Q+ L ++L F+EE+++RDHRKL  E+DLF   ++ GSG+  +H KG  + + L  
Sbjct: 247 TAWESQEALDRHLEFIEEAQRRDHRKLGVELDLFSFPDEIGSGLAVFHPKGGIVRRELED 306

Query: 282 YMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMF------AVKCADDTI-KDLRT 333
           Y RRK  +  Y+ +N+P +    L+  SGH D Y   MF      A   AD ++ K  + 
Sbjct: 307 YSRRKHTEAGYQFVNSPHITKAQLFHTSGHLDWYADGMFPPMHIDAEYNADGSLRKPGQD 366

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
           + LKPMNCP H  +F    +SYRELP+RL EFG+VYR E SG +HGL RVRG T DDAH+
Sbjct: 367 YYLKPMNCPMHCLIFRARGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRVRGLTMDDAHI 426

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR-PEKRVGSDALWDDAENIMKGVL 452
           FCT++QM +E   +   ++ +  D+G     ++LST+ PEK VG++ +W++A  ++  V 
Sbjct: 427 FCTRDQMSDELRSLLRFVLDLLADYGLTDFYLELSTKDPEKFVGAEEVWEEATTVLAEV- 485

Query: 453 DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
                 ++  +      G  AFYGPK    +KDA+GR WQ  TIQ+DFN P RF   Y  
Sbjct: 486 -----GAESGLELVPDPGGAAFYGPKISVQVKDALGRTWQMSTIQLDFNFPERFGLEYTA 540

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIA 572
           +   +  PVMIHRA+FGSIERF GI+ E++ G  P WL+P+Q +   +    V Y +E+A
Sbjct: 541 ADGTRHRPVMIHRALFGSIERFFGILTEHYAGAFPAWLAPVQVVGIPVADEHVAYLEEVA 600

Query: 573 NLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
             LKSH +  E D  ++ +  KI  H+  K+P +++ GD++ +  ++   RFG  T
Sbjct: 601 TQLKSHGVRAEVDASDDRMAKKIVHHTNHKVPFMVLAGDRDVAAGAVSF-RFGDRT 655


>gi|308379255|ref|ZP_07485665.2| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu010]
 gi|308357619|gb|EFP46470.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu010]
          Length = 697

 Score =  466 bits (1198), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 254/656 (38%), Positives = 377/656 (57%), Gaps = 45/656 (6%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVA--INGKVCDLS-DPVREGS 58
           PS  ++  P G+     V   G      + R     A+ V    +G + DLS  P  +  
Sbjct: 21  PSQARIRVPAGTTAATAVGEAG------LPRRGTPDAIVVVRDADGNLRDLSWVPDVDTD 74

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           I  +        +VIRHS AH++A+AVQ ++P+ ++ IGP I DGFYYDFD  +PF+ ++
Sbjct: 75  ITPVAANTDDGRSVIRHSTAHVLAQAVQELFPQAKLGIGPPITDGFYYDFDVPEPFTPED 134

Query: 119 LAQIEKKMQEIIARDSPFLKQ-YLSHEKARELFESKKEAYKVEILESIPAK--------E 169
           LA +EK+M++I+     F ++ Y S E+AR   E   E YK+E+++             +
Sbjct: 135 LAALEKRMRQIVKEGQLFDRRVYESTEQARA--ELANEPYKLELVDDKSGDAEIMEVGGD 192

Query: 170 NVTLY-------RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYG 222
            +T Y       R+  W DLCRGPH+ +T  +  F KL + + AYWRGD     L RIYG
Sbjct: 193 ELTAYDNLNPRTRERVWGDLCRGPHIPTTKHIPAF-KLTRSSAAYWRGDQKNASLQRIYG 251

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLIS 281
           TAW +Q+ L ++L F+EE+++RDHRKL  E+DLF   ++ GSG+  +H KG  + + L  
Sbjct: 252 TAWESQEALDRHLEFIEEAQRRDHRKLGVELDLFSFPDEIGSGLAVFHPKGGIVRRELED 311

Query: 282 YMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMF------AVKCADDTI-KDLRT 333
           Y RRK  +  Y+ +N+P +    L+  SGH D Y   MF      A   AD ++ K  + 
Sbjct: 312 YSRRKHTEAGYQFVNSPHITKAQLFHTSGHLDWYADGMFPPMHIDAEYNADGSLRKPGQD 371

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
           + LKPMNCP H  +F    +SYRELP+RL EFG+VYR E SG +HGL RVRG T DDAH+
Sbjct: 372 YYLKPMNCPMHCLIFRARGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRVRGLTMDDAHI 431

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR-PEKRVGSDALWDDAENIMKGVL 452
           FCT++QM +E   +   ++ +  D+G     ++LST+ PEK VG++ +W++A  ++  V 
Sbjct: 432 FCTRDQMRDELRSLLRFVLDLLADYGLTDFYLELSTKDPEKFVGAEEVWEEATTVLAEV- 490

Query: 453 DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
                 ++  +      G  AFYGPK    +KDA+GR WQ  TIQ+DFN P RF   Y  
Sbjct: 491 -----GAESGLELVPDPGGAAFYGPKISVQVKDALGRTWQMSTIQLDFNFPERFGLEYTA 545

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIA 572
           +   +  PVMIHRA+FGSIERF GI+ E++ G  P WL+P+Q +   +    V Y +E+A
Sbjct: 546 ADGTRHRPVMIHRALFGSIERFFGILTEHYAGAFPAWLAPVQVVGIPVADEHVAYLEEVA 605

Query: 573 NLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
             LKSH +  E D  ++ +  KI  H+  K+P +++ GD++ +  ++   RFG  T
Sbjct: 606 TQLKSHGVRAEVDASDDRMAKKIVHHTNHKVPFMVLAGDRDVAAGAVSF-RFGDRT 660


>gi|254232730|ref|ZP_04926057.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis C]
 gi|124601789|gb|EAY60799.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis C]
          Length = 692

 Score =  466 bits (1198), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 254/656 (38%), Positives = 378/656 (57%), Gaps = 45/656 (6%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVA--INGKVCDLS-DPVREGS 58
           PS  ++  P G+     V   G      + R     A+ V    +G + DLS  P  +  
Sbjct: 16  PSQARIRVPAGTTAATAVGEAG------LPRRGTPDAIVVVRDADGNLRDLSWVPDVDTD 69

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           I  +        +VIRHS AH++A+AVQ ++P+ ++ IGP I DGFYYDFD  +PF+ ++
Sbjct: 70  ITPVAANTDDGRSVIRHSTAHVLAQAVQELFPQAKLGIGPPITDGFYYDFDVPEPFTPED 129

Query: 119 LAQIEKKMQEIIARDSPFLKQ-YLSHEKARELFESKKEAYKVEILESIPAK--------E 169
           LA +EK+M++I+     F ++ Y S E+AR   E   E YK+E+++             +
Sbjct: 130 LAALEKRMRQIVKEGQLFDRRVYESTEQARA--ELANEPYKLELVDDKSGDAEIMEVGGD 187

Query: 170 NVTLY-------RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYG 222
            +T Y       R+  W DLCRGPH+ +T  +  F KL + + AYWRGD     L RIYG
Sbjct: 188 ELTAYDNLNPRTRERVWGDLCRGPHIPTTKHIPAF-KLTRSSAAYWRGDQKNASLQRIYG 246

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLIS 281
           TAW +Q+ L ++L F+EE+++RDHRKL  E+DLF   ++ GSG+  +H KG  + + L  
Sbjct: 247 TAWESQEALDRHLEFIEEAQRRDHRKLGVELDLFSFPDEIGSGLAVFHPKGGIVRRELED 306

Query: 282 YMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA-----VKC-ADDTI-KDLRT 333
           Y RRK  +  Y+ +N+P +    L+  SGH D Y   MF       +C AD ++ K  + 
Sbjct: 307 YSRRKHTEAGYQFVNSPHITKAQLFHTSGHLDWYADGMFPPMHIDAECNADGSLRKPGQD 366

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
           + LKPMNCP H  +F    +SYRELP+RL EFG+VYR E SG +HGL RVRG T DDAH+
Sbjct: 367 YYLKPMNCPMHCLIFRARGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRVRGLTMDDAHI 426

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR-PEKRVGSDALWDDAENIMKGVL 452
           FCT++QM +E   +   ++ +  D+G     ++LST+ PEK VG++ +W++A  ++  V 
Sbjct: 427 FCTRDQMRDELRSLLRFVLDLLADYGLTDFYLELSTKDPEKFVGAEEVWEEATTVLAEV- 485

Query: 453 DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
                 ++  +      G  AFYGPK    +KDA+GR WQ  TIQ+DFN P RF   Y  
Sbjct: 486 -----GAESGLELVPDPGGAAFYGPKISVQVKDALGRTWQMSTIQLDFNFPERFGLEYTA 540

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIA 572
           +   +  PVMIHRA+FGSIERF GI+ E++ G  P WL+P+Q +   +    V Y +E+A
Sbjct: 541 ADGTRHRPVMIHRALFGSIERFFGILTEHYAGAFPAWLAPVQVVGIPVADEHVAYLEEVA 600

Query: 573 NLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
             LKSH +  E D  ++ +  KI  H+  K+P +++ GD++ +  ++   RFG  T
Sbjct: 601 TQLKSHGVRAEVDASDDRMAKKIVHHTNHKVPFMVLAGDRDVAAGAVSF-RFGDRT 655


>gi|293400866|ref|ZP_06645011.1| threonine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291305892|gb|EFE47136.1| threonine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 577

 Score =  466 bits (1198), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 242/589 (41%), Positives = 373/589 (63%), Gaps = 23/589 (3%)

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE-L 119
           +I   +   L+++ HSCAH+MA+AV+ ++P+ +  +GP+I DGFYYD D       DE L
Sbjct: 1   MIDIRENEQLSMLNHSCAHMMAQAVKRLYPQAKFWVGPVISDGFYYDIDLGDDVIKDEDL 60

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IEK+M++I       +++ +S E+A E+F    + YK+++++ +     +T Y+QGE+
Sbjct: 61  PKIEKEMKKIAKDGKRIVRKEISKEEALEMFAD--DPYKIDLIQDL-EDGTITCYQQGEF 117

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV +   +K F  L   +GAYW+GD+   ML RIYG  + T++EL ++L+ LE
Sbjct: 118 IDLCRGPHVETVKLLKNFKLLKH-SGAYWKGDAENKMLQRIYGVCYPTKEELEEHLHMLE 176

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQ 298
           E++KRDH+KL REM LF ++E   G+ F+   G  I   L ++      K++Y+ I TP 
Sbjct: 177 EAKKRDHKKLGREMGLFMMSEYAPGMPFFLPNGMIIRNLLENFWYEEHTKENYKFIKTPI 236

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++ + LW+ SGHW +Y+ NM+       T+ D R FA+KPMNCPG + VF +GL SY++L
Sbjct: 237 MMSKELWEVSGHWANYKENMYT------TMVDDREFAIKPMNCPGSLLVFKNGLHSYKDL 290

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+ E G V+R+E SG+L+GL RVR FTQDDAH+F   +Q+ +E  ++ N I  +Y  F
Sbjct: 291 PLRMGELGQVHRHEASGALNGLFRVRTFTQDDAHIFMRPDQIESEVKELINFIDRVYSIF 350

Query: 419 GFEKIMVKLSTRPEKR-VGSDALWDDAENIMKGVLDTIKNSSQD-RINTGVLLGEGAFYG 476
           G     ++LSTRPEK+ +G  A+W+ +E   K + D   ++ +D ++N G    +GAFYG
Sbjct: 351 GL-SYRIELSTRPEKKYIGDLAIWEKSE---KALADACVSAGKDYKVNPG----DGAFYG 402

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK ++ +KD++GR+WQCGTIQ+D NLP RF+  YV     K  PVM+HR +FGSIERFIG
Sbjct: 403 PKLDFHIKDSLGREWQCGTIQLDMNLPERFDLTYVEKDGTKVRPVMLHRVIFGSIERFIG 462

Query: 537 IMIENFKGNLPLWLSPIQAIVTTI-TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
           I+IE++ G+ P WL+P Q +V  +      + A  I   L +     ++D RNE + Y+I
Sbjct: 463 ILIEHYAGHFPTWLAPTQVMVVPVHYERHAQAANAINEKLLAMGFRSKSDARNEKLGYRI 522

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           RE  + KIP  ++ GD E    ++ +RR  S  +  + + + I  L+ E
Sbjct: 523 REAQLAKIPYQLVIGDGEVEANTVTVRRAQSKESVTMPVEEFIAKLSAE 571


>gi|15609751|ref|NP_217130.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis H37Rv]
 gi|15842154|ref|NP_337191.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551]
 gi|31793799|ref|NP_856292.1| threonyl-tRNA synthetase [Mycobacterium bovis AF2122/97]
 gi|121638501|ref|YP_978725.1| threonyl-tRNA synthetase [Mycobacterium bovis BCG str. Pasteur
           1173P2]
 gi|148662454|ref|YP_001283977.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|148823808|ref|YP_001288562.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis F11]
 gi|167968044|ref|ZP_02550321.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|215404564|ref|ZP_03416745.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987]
 gi|215412399|ref|ZP_03421153.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A]
 gi|215428017|ref|ZP_03425936.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis T92]
 gi|215431569|ref|ZP_03429488.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis EAS054]
 gi|218754354|ref|ZP_03533150.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis GM 1503]
 gi|219558618|ref|ZP_03537694.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis T17]
 gi|224990995|ref|YP_002645682.1| threonyl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253798303|ref|YP_003031304.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis KZN 1435]
 gi|254551665|ref|ZP_05142112.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|260187628|ref|ZP_05765102.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis CPHL_A]
 gi|260201742|ref|ZP_05769233.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis T46]
 gi|260205937|ref|ZP_05773428.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis K85]
 gi|289444154|ref|ZP_06433898.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis T46]
 gi|289448265|ref|ZP_06438009.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis CPHL_A]
 gi|289553596|ref|ZP_06442806.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis KZN 605]
 gi|289570786|ref|ZP_06451013.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis T17]
 gi|289575325|ref|ZP_06455552.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis K85]
 gi|289746408|ref|ZP_06505786.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis 02_1987]
 gi|289751239|ref|ZP_06510617.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis T92]
 gi|289754734|ref|ZP_06514112.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis EAS054]
 gi|289762788|ref|ZP_06522166.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis GM 1503]
 gi|294994277|ref|ZP_06799968.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis 210]
 gi|297635225|ref|ZP_06953005.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis KZN 4207]
 gi|297732218|ref|ZP_06961336.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis KZN R506]
 gi|298526090|ref|ZP_07013499.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis
           94_M4241A]
 gi|306776889|ref|ZP_07415226.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu001]
 gi|306780653|ref|ZP_07418990.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu002]
 gi|306785417|ref|ZP_07423739.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu003]
 gi|306790017|ref|ZP_07428339.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu004]
 gi|306794098|ref|ZP_07432400.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu005]
 gi|306798512|ref|ZP_07436814.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu006]
 gi|306804375|ref|ZP_07441043.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu008]
 gi|306807585|ref|ZP_07444253.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu007]
 gi|306969787|ref|ZP_07482448.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu009]
 gi|307080714|ref|ZP_07489884.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu011]
 gi|307085303|ref|ZP_07494416.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu012]
 gi|313659553|ref|ZP_07816433.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis KZN V2475]
 gi|54039692|sp|P67583|SYT_MYCBO RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|54042049|sp|P67582|SYT_MYCTU RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|166225463|sp|A1KLW4|SYT_MYCBP RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|166225467|sp|A5U5W5|SYT_MYCTA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|254783528|sp|C1AF85|SYT_MYCBT RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|2104299|emb|CAB08628.1| PROBABLE THREONYL-TRNA SYNTHETASE THRS (THREONINE-TRNA
           SYNTHETASE)(ThrRS) (THREONINE-TRNA LIGASE)
           [Mycobacterium tuberculosis H37Rv]
 gi|13882439|gb|AAK47005.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551]
 gi|31619393|emb|CAD94831.1| PROBABLE THREONYL-TRNA SYNTHETASE THRS (THREONINE-TRNA
           SYNTHETASE)(ThrRS) (THREONINE-TRNA LIGASE)
           [Mycobacterium bovis AF2122/97]
 gi|121494149|emb|CAL72627.1| Probable threonyl-tRNA synthetase thrS [Mycobacterium bovis BCG
           str. Pasteur 1173P2]
 gi|148506606|gb|ABQ74415.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|148722335|gb|ABR06960.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis F11]
 gi|224774108|dbj|BAH26914.1| threonyl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253319806|gb|ACT24409.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis KZN 1435]
 gi|289417073|gb|EFD14313.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis T46]
 gi|289421223|gb|EFD18424.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis CPHL_A]
 gi|289438228|gb|EFD20721.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis KZN 605]
 gi|289539756|gb|EFD44334.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis K85]
 gi|289544540|gb|EFD48188.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis T17]
 gi|289686936|gb|EFD54424.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis 02_1987]
 gi|289691826|gb|EFD59255.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis T92]
 gi|289695321|gb|EFD62750.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis EAS054]
 gi|289710294|gb|EFD74310.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis GM 1503]
 gi|298495884|gb|EFI31178.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis
           94_M4241A]
 gi|308214743|gb|EFO74142.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu001]
 gi|308326483|gb|EFP15334.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu002]
 gi|308329935|gb|EFP18786.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu003]
 gi|308333550|gb|EFP22401.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu004]
 gi|308337578|gb|EFP26429.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu005]
 gi|308341244|gb|EFP30095.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu006]
 gi|308345982|gb|EFP34833.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu007]
 gi|308349051|gb|EFP37902.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu008]
 gi|308352705|gb|EFP41556.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu009]
 gi|308361561|gb|EFP50412.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu011]
 gi|308365172|gb|EFP54023.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu012]
 gi|323718811|gb|EGB27968.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis CDC1551A]
 gi|326904227|gb|EGE51160.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis W-148]
 gi|328458073|gb|AEB03496.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis KZN 4207]
          Length = 692

 Score =  466 bits (1198), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 254/656 (38%), Positives = 377/656 (57%), Gaps = 45/656 (6%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVA--INGKVCDLS-DPVREGS 58
           PS  ++  P G+     V   G      + R     A+ V    +G + DLS  P  +  
Sbjct: 16  PSQARIRVPAGTTAATAVGEAG------LPRRGTPDAIVVVRDADGNLRDLSWVPDVDTD 69

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           I  +        +VIRHS AH++A+AVQ ++P+ ++ IGP I DGFYYDFD  +PF+ ++
Sbjct: 70  ITPVAANTDDGRSVIRHSTAHVLAQAVQELFPQAKLGIGPPITDGFYYDFDVPEPFTPED 129

Query: 119 LAQIEKKMQEIIARDSPFLKQ-YLSHEKARELFESKKEAYKVEILESIPAK--------E 169
           LA +EK+M++I+     F ++ Y S E+AR   E   E YK+E+++             +
Sbjct: 130 LAALEKRMRQIVKEGQLFDRRVYESTEQARA--ELANEPYKLELVDDKSGDAEIMEVGGD 187

Query: 170 NVTLY-------RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYG 222
            +T Y       R+  W DLCRGPH+ +T  +  F KL + + AYWRGD     L RIYG
Sbjct: 188 ELTAYDNLNPRTRERVWGDLCRGPHIPTTKHIPAF-KLTRSSAAYWRGDQKNASLQRIYG 246

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLIS 281
           TAW +Q+ L ++L F+EE+++RDHRKL  E+DLF   ++ GSG+  +H KG  + + L  
Sbjct: 247 TAWESQEALDRHLEFIEEAQRRDHRKLGVELDLFSFPDEIGSGLAVFHPKGGIVRRELED 306

Query: 282 YMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMF------AVKCADDTI-KDLRT 333
           Y RRK  +  Y+ +N+P +    L+  SGH D Y   MF      A   AD ++ K  + 
Sbjct: 307 YSRRKHTEAGYQFVNSPHITKAQLFHTSGHLDWYADGMFPPMHIDAEYNADGSLRKPGQD 366

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
           + LKPMNCP H  +F    +SYRELP+RL EFG+VYR E SG +HGL RVRG T DDAH+
Sbjct: 367 YYLKPMNCPMHCLIFRARGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRVRGLTMDDAHI 426

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR-PEKRVGSDALWDDAENIMKGVL 452
           FCT++QM +E   +   ++ +  D+G     ++LST+ PEK VG++ +W++A  ++  V 
Sbjct: 427 FCTRDQMRDELRSLLRFVLDLLADYGLTDFYLELSTKDPEKFVGAEEVWEEATTVLAEV- 485

Query: 453 DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
                 ++  +      G  AFYGPK    +KDA+GR WQ  TIQ+DFN P RF   Y  
Sbjct: 486 -----GAESGLELVPDPGGAAFYGPKISVQVKDALGRTWQMSTIQLDFNFPERFGLEYTA 540

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIA 572
           +   +  PVMIHRA+FGSIERF GI+ E++ G  P WL+P+Q +   +    V Y +E+A
Sbjct: 541 ADGTRHRPVMIHRALFGSIERFFGILTEHYAGAFPAWLAPVQVVGIPVADEHVAYLEEVA 600

Query: 573 NLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
             LKSH +  E D  ++ +  KI  H+  K+P +++ GD++ +  ++   RFG  T
Sbjct: 601 TQLKSHGVRAEVDASDDRMAKKIVHHTNHKVPFMVLAGDRDVAAGAVSF-RFGDRT 655


>gi|305432763|ref|ZP_07401922.1| threonine--tRNA ligase [Campylobacter coli JV20]
 gi|304444160|gb|EFM36814.1| threonine--tRNA ligase [Campylobacter coli JV20]
          Length = 610

 Score =  466 bits (1198), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 246/618 (39%), Positives = 376/618 (60%), Gaps = 22/618 (3%)

Query: 32  RSLAKKAVAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE 91
           + + K+ +A   + K+ D          EI       SL VIRHSCAH+MA+A++S++PE
Sbjct: 7   KVMEKEVIAYLDDEKIVDSQSKNSIDLKEIYFDNSKESLEVIRHSCAHLMAQAIKSLYPE 66

Query: 92  VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFE 151
            +  +GP+IEDGFYYDF        ++LA+IEKKM+E++       K  ++  +A   F 
Sbjct: 67  AKFFVGPVIEDGFYYDFRVNSKIGEEDLAKIEKKMKELVEAKQEIEKYEITKNEAIAKF- 125

Query: 152 SKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGD 211
            K +  K E+L  IP  + V++Y+QGE+ DLCRGPHV +T  ++ F  L +VAGAY  GD
Sbjct: 126 -KDDDLKQEVLLRIPDGK-VSIYKQGEFEDLCRGPHVPNTKFLRNF-SLTRVAGAYLGGD 182

Query: 212 SNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHR 270
             R ML+RIYGTA+  ++ L ++L  +EE++KRDHRKL  E+ LF   ++ G G+  W  
Sbjct: 183 EKREMLTRIYGTAFADKESLKEHLRIIEEAKKRDHRKLGTELKLFTFDDEIGGGLPIWLS 242

Query: 271 KGWKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTI 328
            G ++ ++ + +M  KI     YE +  P++L    W+ SGH+ +Y+ NM+  +      
Sbjct: 243 NGARL-RSKLEHMLYKIHRLRGYEPVRGPELLKADAWKISGHYANYKENMYFTQI----- 296

Query: 329 KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQ 388
            D + + +KPMNC GH+ ++   ++SYR+LP++  E+G V+R+E SG LHGL RVR FTQ
Sbjct: 297 -DEQEYGIKPMNCVGHIKIYQSDVRSYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFTQ 355

Query: 389 DDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIM 448
           DDAH+FC   Q+  + L+I   + ++ K F F   M ++ST+P K +G D +WD A   +
Sbjct: 356 DDAHIFCMPSQIKEQVLEILAFVDNLMKLFDFSYEM-EISTKPAKAIGDDEIWDTATKAL 414

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
           K  LD      +  +  G+  G GAFYGPK +  + DA+ R WQCGTIQVDFNLP RF  
Sbjct: 415 KEALD------EQGLKYGIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDFNLPERFKL 468

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYA 568
            Y +S++EK  PVM+HRA+ GS ERFIGI+ E+  G  P +++P    +  I+ S + YA
Sbjct: 469 EYTDSNNEKKQPVMLHRAILGSFERFIGILTEHCAGEFPFFIAPTAVGIVPISDSHIAYA 528

Query: 569 QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
           +EI   L   ++  E   +NE+++ KIR    +K+P+I++ GD+E ++RS+ +R   +  
Sbjct: 529 KEIQRALLELNIDSEVYEKNESLSKKIRTAEKQKLPMILVLGDEEVAKRSVALRDRRAKE 588

Query: 629 TQKVSLLDAIPILTKESL 646
            + +S LD    L KE +
Sbjct: 589 QKNLS-LDEFIKLVKEKM 605


>gi|229491972|ref|ZP_04385789.1| threonyl-tRNA synthetase [Rhodococcus erythropolis SK121]
 gi|229321104|gb|EEN86908.1| threonyl-tRNA synthetase [Rhodococcus erythropolis SK121]
          Length = 649

 Score =  466 bits (1198), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 247/632 (39%), Positives = 376/632 (59%), Gaps = 46/632 (7%)

Query: 45  GKVCDLS-DPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG 103
           G + DLS  P  +  +E +        +VIRHS AH++A+AVQ  +P+ ++ IGP I+DG
Sbjct: 10  GTLKDLSWTPEVDVDVEPVAASTEDGRSVIRHSAAHVLAQAVQKEFPDAKLGIGPPIKDG 69

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYL-SHEKARELFESKKEAYKVEIL 162
           FYYDF  ++PF+ ++LA++EK+M++II     F ++ + S E AR   E   E +K+E++
Sbjct: 70  FYYDFAVDRPFTPEDLAKLEKRMKQIIKGSQRFSRRVVDSIEDAR--VELADEPFKLELI 127

Query: 163 ESIPAKEN----------VTLY-----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAG 205
           +     ++          +T+Y     R G+  W DLCRGPH+ +T  +  F KL + + 
Sbjct: 128 DDKSGIDDPEIMEVGGNELTIYDNLDPRTGDKIWSDLCRGPHIPTTKHIPAF-KLTRSSA 186

Query: 206 AYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSG 264
           AYWRG+ +   L R+YGTAW + +   +YL  L E+E+RDHRKL  E+DLF   ++ GSG
Sbjct: 187 AYWRGNQDNADLQRVYGTAWESTEAQDEYLELLAEAERRDHRKLGTELDLFSFPDELGSG 246

Query: 265 VIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKC 323
           +  +H KG  I   + +Y R R I+  YE +NTP +   HL++ SGH D YR  MF    
Sbjct: 247 LPVFHPKGGIIRTEMENYSRSRHIEAGYEFVNTPHITKGHLYEVSGHLDWYRDGMFPAMH 306

Query: 324 ADDTIKDLRT-------FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            D+ + +  T       + LKPMNCP H  +F    +SYRELP+RL EFGSVYR E SG 
Sbjct: 307 VDEELNEDGTVRKPGQDYYLKPMNCPMHNLIFRARGRSYRELPLRLFEFGSVYRYEKSGV 366

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR-PEKRV 435
           +HGL RVRG TQDDAH++CT+EQM +E       ++++ KD+G +   ++LST+ P+K V
Sbjct: 367 IHGLTRVRGMTQDDAHIYCTREQMRDELTTTLQFVLNLLKDYGLDDFYLELSTKNPDKFV 426

Query: 436 GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL----GEGAFYGPKFEYILKDAIGRDW 491
           GSD +W++A   +  V +           +G+ L    G  AFYGPK    +KDA+GR W
Sbjct: 427 GSDDVWEEATATLAEVGEA----------SGLTLVPDPGGAAFYGPKISVQVKDALGRTW 476

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLS 551
           Q  TIQ+DFNLP RF   Y  +   K  PVMIHRA+FGSIERF G++ E++ G  P WL+
Sbjct: 477 QMSTIQLDFNLPERFELEYTGNDGVKTRPVMIHRALFGSIERFFGVLTEHYAGAFPAWLA 536

Query: 552 PIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
           P+Q +   +  +  ++  ++   LK+  +  E DF ++ +  KIR H+ +K+P +++ G+
Sbjct: 537 PVQVVGIPVAEAFADHLFDVTKKLKAAGVRAEVDFSDDRMQKKIRNHTTQKVPFMLLAGE 596

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           ++    ++  R    T    + + DA+ I+T+
Sbjct: 597 RDVEAGAVSFRFRDGTQINGIPVDDAVRIITE 628


>gi|220928798|ref|YP_002505707.1| threonyl-tRNA synthetase [Clostridium cellulolyticum H10]
 gi|219999126|gb|ACL75727.1| threonyl-tRNA synthetase [Clostridium cellulolyticum H10]
          Length = 645

 Score =  466 bits (1198), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 248/630 (39%), Positives = 382/630 (60%), Gaps = 26/630 (4%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           IK+T  DGS K +    T  +VAESIS  LA+ A+A  ++GKV +L   +  + S+ ++T
Sbjct: 2   IKITLKDGSNKEYQSGITIKEVAESISAGLARAALAGEVDGKVKELDFKLNNDCSLSLLT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
             D       RH+ +H++A+AV+ ++P V++AIGP IE+GFYYDFD ++ F+ ++LA+IE
Sbjct: 62  FADEGGRLAYRHTASHVLAQAVKRMFPNVKLAIGPAIENGFYYDFDTDKNFAPEDLAKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M++II  D    +  L  ++A +  E K E YK+E+++ +P  E ++ Y+QG++ DLC
Sbjct: 122 KEMEKIIKEDISLERFTLPRDEAIKFMEEKGEPYKIELIKELPEGEEISFYKQGDFVDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+ STG++K   KLM  AGAYWRG+    ML RIYGTA+  + EL +Y+  LEE++K
Sbjct: 182 AGPHLLSTGKLKAV-KLMSAAGAYWRGNEKNKMLQRIYGTAFPKKSELEEYVTKLEEAKK 240

Query: 244 RDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKDDYEE-----INTP 297
           RDH KL RE++LF   E+ G G+     KG +I QTL    +R ++D+ E        TP
Sbjct: 241 RDHNKLGRELELFTTVEEIGQGLPLLMPKGARIVQTL----QRFVEDEEERRGYVLTKTP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    L++ SGHW  Y+  MF +    D  KD    AL+PM CP    ++N  L SYR+
Sbjct: 297 LMAKSDLYKLSGHWQHYKDGMFLL---GDEEKDEEVMALRPMTCPFQFMIYNTKLHSYRD 353

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R  E  +++RNE SG +HGL+RVR FT  + H+ CT EQ+ +E   + +LI  + + 
Sbjct: 354 LPIRYGETSTLFRNEASGEMHGLIRVRQFTISEGHLVCTPEQLEDEFKGVVDLIKFMMET 413

Query: 418 FGFEK-IMVKLST----RPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
            G +  +  + S       EK +G++  W++ ++ M+ +LD +K      I+     GE 
Sbjct: 414 LGIQDDVTYRFSKWDPKNKEKYIGNEEDWENVQDQMRTILDHLK------IDYKEAEGEA 467

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           AFYGPK +   K+  G++    T+QVDF L  R N  YV+ ++EK HP +IHR   G  E
Sbjct: 468 AFYGPKLDIQCKNVHGKEDTIITVQVDFALAERLNMVYVDKNNEKKHPYIIHRTSIGCYE 527

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
           R + I+IE + G  P WL P+QA +  +     ++AQ++A +L+   + +E D RNE I 
Sbjct: 528 RTLAILIEKYAGAFPTWLCPVQAKILPLVDKHHDFAQKVAQMLRDKGVKVEVDTRNEKIG 587

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIR 622
           YKIRE  ++KIP +++ GDKE    ++ +R
Sbjct: 588 YKIREAQMEKIPYMLVIGDKEMENNAVSVR 617


>gi|254365284|ref|ZP_04981329.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis str.
           Haarlem]
 gi|134150797|gb|EBA42842.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis str.
           Haarlem]
          Length = 692

 Score =  465 bits (1197), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 254/656 (38%), Positives = 377/656 (57%), Gaps = 45/656 (6%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVA--INGKVCDLS-DPVREGS 58
           PS  ++  P G+     V   G      + R     A+ V    +G + DLS  P  +  
Sbjct: 16  PSQARIRVPAGTTAATAVGEAG------LPRRDTPDAIVVVRDADGNLRDLSWVPDVDTD 69

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           I  +        +VIRHS AH++A+AVQ ++P+ ++ IGP I DGFYYDFD  +PF+ ++
Sbjct: 70  ITPVAANTDDGRSVIRHSTAHVLAQAVQELFPQAKLGIGPPITDGFYYDFDVPEPFTPED 129

Query: 119 LAQIEKKMQEIIARDSPFLKQ-YLSHEKARELFESKKEAYKVEILESIPAK--------E 169
           LA +EK+M++I+     F ++ Y S E+AR   E   E YK+E+++             +
Sbjct: 130 LAALEKRMRQIVKEGQLFDRRVYESTEQARA--ELANEPYKLELVDDKSGDAEIMEVGGD 187

Query: 170 NVTLY-------RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYG 222
            +T Y       R+  W DLCRGPH+ +T  +  F KL + + AYWRGD     L RIYG
Sbjct: 188 ELTAYDNLNPRTRERVWGDLCRGPHIPTTKHIPAF-KLTRSSAAYWRGDQKNASLQRIYG 246

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLIS 281
           TAW +Q+ L ++L F+EE+++RDHRKL  E+DLF   ++ GSG+  +H KG  + + L  
Sbjct: 247 TAWESQEALDRHLEFIEEAQRRDHRKLGVELDLFSFPDEIGSGLAVFHPKGGIVRRELED 306

Query: 282 YMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMF------AVKCADDTI-KDLRT 333
           Y RRK  +  Y+ +N+P +    L+  SGH D Y   MF      A   AD ++ K  + 
Sbjct: 307 YSRRKHTEAGYQFVNSPHITKAQLFHTSGHLDWYADGMFPPMHIDAEYNADGSLRKPGQD 366

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
           + LKPMNCP H  +F    +SYRELP+RL EFG+VYR E SG +HGL RVRG T DDAH+
Sbjct: 367 YYLKPMNCPMHCLIFRARGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRVRGLTMDDAHI 426

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR-PEKRVGSDALWDDAENIMKGVL 452
           FCT++QM +E   +   ++ +  D+G     ++LST+ PEK VG++ +W++A  ++  V 
Sbjct: 427 FCTRDQMRDELRSLLRFVLDLLADYGLTDFYLELSTKDPEKFVGAEEVWEEATTVLAEV- 485

Query: 453 DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
                 ++  +      G  AFYGPK    +KDA+GR WQ  TIQ+DFN P RF   Y  
Sbjct: 486 -----GAESGLELVPDPGGAAFYGPKISVQVKDALGRTWQMSTIQLDFNFPERFGLEYTA 540

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIA 572
           +   +  PVMIHRA+FGSIERF GI+ E++ G  P WL+P+Q +   +    V Y +E+A
Sbjct: 541 ADGTRHRPVMIHRALFGSIERFFGILTEHYAGAFPAWLAPVQVVGIPVADEHVAYLEEVA 600

Query: 573 NLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
             LKSH +  E D  ++ +  KI  H+  K+P +++ GD++ +  ++   RFG  T
Sbjct: 601 TQLKSHGVRAEVDASDDRMAKKIVHHTNHKVPFMVLAGDRDVAAGAVSF-RFGDRT 655


>gi|46191233|ref|ZP_00120366.2| COG0441: Threonyl-tRNA synthetase [Bifidobacterium longum DJO10A]
 gi|189439311|ref|YP_001954392.1| threonyl-tRNA synthetase [Bifidobacterium longum DJO10A]
 gi|238692055|sp|B3DRX5|SYT_BIFLD RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|189427746|gb|ACD97894.1| Threonyl-tRNA synthetase [Bifidobacterium longum DJO10A]
          Length = 677

 Score =  465 bits (1197), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 255/639 (39%), Positives = 372/639 (58%), Gaps = 51/639 (7%)

Query: 36  KKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           K  +AV ING+  DL  P+ +G +++ I  +    LA++RHS  H+MA+AVQ ++P  ++
Sbjct: 31  KNIIAVKINGENRDLYTPLNDGDTVDPIALDSEDGLAIMRHSATHVMAQAVQEVYPNAKL 90

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            +GP+I+DGFYYDF  +QPF+ D+L  IEK+MQ II     F ++ ++ E+A  L E   
Sbjct: 91  GVGPVIKDGFYYDFQVDQPFTPDDLKDIEKRMQRIIKSSQSFRRRSVTEEEA--LKEEAD 148

Query: 155 EAYKVEILESIPA-----------KENVTLY----RQGE--WFDLCRGPHVRSTGQVKKF 197
           + +K+E++E   A           ++ ++ Y    R G   W DLCRGPH+ +T  +K F
Sbjct: 149 QPFKIELIEDKEAHLDPAAATEISEKELSFYDNVDRDGNVVWKDLCRGPHLPNTRYIKAF 208

Query: 198 FKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFH 257
            K+ + A AYWRG    P + RIYGTAW T+++L  Y   LEE+ KRDHRKL  EMDLF 
Sbjct: 209 -KIERSAAAYWRGSEKNPTMQRIYGTAWATKEDLKAYQTRLEEAAKRDHRKLGAEMDLFS 267

Query: 258 IAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYR 315
             ++ G G+  +H KG  +   +  Y R    K  Y  + TP +    L++ SGH   Y+
Sbjct: 268 FPDEIGPGLAVFHPKGAAVINAMEDYSREMHRKHHYSFVQTPHITKGGLYETSGHLHWYK 327

Query: 316 ANMFAV------KCADDTI-KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV 368
             M+        K AD  I K    + LKPMNCP H  +F    +SYRELP+RL EFG+V
Sbjct: 328 DGMYPPMHLDEEKDADGNITKPGADYYLKPMNCPMHNLIFKSRQRSYRELPLRLFEFGTV 387

Query: 369 YRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLS 428
           YR E SG +HGL RVRG TQDD+H++CT+EQM +E   +   ++++ KDFG     ++LS
Sbjct: 388 YRYEKSGEVHGLTRVRGLTQDDSHIYCTREQMKDELTSLLTFVLNLLKDFGLTDFYLELS 447

Query: 429 TR-PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAI 487
           T+ P K VGSD +W++A N +  V    K S+ + ++        AFYGPK     +DAI
Sbjct: 448 TKDPNKYVGSDEIWEEATNTLAEV---AKESNLELVDDPC---GAAFYGPKISVQARDAI 501

Query: 488 GRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           GR WQ  TIQ+DFNLP RF   Y+        PVMIHRA+FGSIERF  +++E++ G  P
Sbjct: 502 GRTWQVSTIQLDFNLPERFQLEYIAKDGTHQRPVMIHRALFGSIERFFAVLLEHYAGAFP 561

Query: 548 LWLSPIQAIVTTITSSAVEYAQEIANLLKS---HHLSIETDFRNETINYKIREHSIKKIP 604
            WL+P+Q +   +   A E+A  +A  +KS     +  E D+ ++    KIR  S  K+P
Sbjct: 562 AWLAPVQVLGVPV---ADEFAPHLAGFVKSLEDEMVRCEIDYSDDRFGKKIRNASKSKVP 618

Query: 605 IIIICGDKEASERSIGIR-RFGSTTTQKVSLLDAIPILT 642
            I+I G+++ +  ++  R R GS        L+ +P+ T
Sbjct: 619 FILIVGEEDMNNNAVSFRFRDGSQ-------LNGVPVDT 650


>gi|169351009|ref|ZP_02867947.1| hypothetical protein CLOSPI_01786 [Clostridium spiroforme DSM 1552]
 gi|169292071|gb|EDS74204.1| hypothetical protein CLOSPI_01786 [Clostridium spiroforme DSM 1552]
          Length = 606

 Score =  465 bits (1197), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 237/589 (40%), Positives = 374/589 (63%), Gaps = 20/589 (3%)

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE- 118
           ++I  ++   L+V+ HSCAH+MA+A++ ++P+ +  +GP++ +GFYYD D       DE 
Sbjct: 29  KMIDFKEDEKLSVLNHSCAHVMAQAIKHLYPQAKFWVGPVVSEGFYYDVDLGNAVIKDED 88

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           + +IEK+M++I       ++Q +S E+A E+F  K + YK++++ +     N++ Y+QG+
Sbjct: 89  IPKIEKEMKKICKDGKRIVRQEISKEEALEMF--KDDEYKIDLINNFENGTNISCYKQGD 146

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + DLCRGPHV +    K F KL K +GAYW+GD N  +L RIYG  + T + L ++L  L
Sbjct: 147 FVDLCRGPHVETVKACKNF-KLTKHSGAYWKGDKNNKVLQRIYGVCFETPEALEEHLNLL 205

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTP 297
           EE+++RDH+K+ +E+ LF ++E   G+  +  KG  +  TL  +      K+ Y  I TP
Sbjct: 206 EEAKRRDHKKIGKELGLFMMSEYAPGMPIFLPKGMILRNTLEQFWYEEHTKEGYVFIKTP 265

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++ + LW+ SGHW +Y+ +M+       ++ D R FA+KPMNCPG + V+ +GL SY++
Sbjct: 266 IMMSRELWETSGHWANYKDDMYT------SMVDDREFAIKPMNCPGSLLVYKNGLHSYKD 319

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+ E G V+R+E SG+L+GL RVR FTQDDAH+F T +Q+ +E +K+ N I  +Y  
Sbjct: 320 LPLRMGELGQVHRHEASGALNGLFRVRTFTQDDAHIFMTPDQIESEIIKLINFIDRVYNS 379

Query: 418 FGFEKIMVKLSTRPE-KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
                  ++LSTRPE K +G  A+W+ +E  +             +IN G    +GAFYG
Sbjct: 380 LNLS-YEIELSTRPEEKYIGDLAIWEKSEAALAAA--CKAAGKDYKINPG----DGAFYG 432

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK ++ +KD++GR WQCGTIQ+D NLP RF+  Y++   EK  PVM+HR +FGSIERFIG
Sbjct: 433 PKLDFHVKDSLGRVWQCGTIQLDMNLPERFDITYIDDKGEKARPVMLHRVIFGSIERFIG 492

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKI 595
           I+IE+F G  PLWL+P+Q  V  + +   +EYA+E+  LL+   L +E D R E + Y+I
Sbjct: 493 ILIEHFAGVFPLWLAPVQVKVLPVNNEYHLEYAKEVTKLLQEAGLKVEMDAREEKLGYRI 552

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           RE  ++K+P +++ G+ E  E+++  R+ G      V   + + +L KE
Sbjct: 553 REGQMEKVPYLLVLGNNERDEKTVTYRQHGQQKQITVPFDEFVSMLKKE 601


>gi|32265941|ref|NP_859973.1| threonyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449]
 gi|73919797|sp|Q7VJ09|SYT_HELHP RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|32261990|gb|AAP77039.1| threonyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449]
          Length = 604

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 234/557 (42%), Positives = 355/557 (63%), Gaps = 20/557 (3%)

Query: 69  SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQE 128
           SLA+IRHSCAH+MA+A++ ++PE Q  +GP++++GFYYDF      S ++L  IE KM+E
Sbjct: 37  SLAIIRHSCAHLMAQAIKILYPEAQFFVGPVVDEGFYYDFKVNTKISEEDLLVIEAKMKE 96

Query: 129 IIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           I     P  K  LS ++A+  F    +  KV ++  IP  E +++Y QG++ DLCRGPH+
Sbjct: 97  IAKNAYPITKITLSRKEAQARF--AHDELKVAVMSRIP-DEKLSIYTQGDFEDLCRGPHL 153

Query: 189 RSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRK 248
            +T ++ + FKL K+AGAY  GD N  ML RIYG A+  +Q L  YL+ LEE++KRDHRK
Sbjct: 154 PNT-KLLEHFKLTKIAGAYLGGDENAQMLIRIYGIAFADKQSLKDYLFTLEEAKKRDHRK 212

Query: 249 LAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ 306
           L +EM LF   E+ G+G+  W  KG ++   +   + + +K+  YE +  P++L   +W+
Sbjct: 213 LGQEMGLFTFDEEIGAGLPIWLPKGARLRHNIEHLLTQALKERGYEPVRGPEILKSDVWK 272

Query: 307 QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFG 366
           +SGH+ +Y+ NM+       TI D + + +KPMNC GH+ V+    +SYRELP+R  E+G
Sbjct: 273 KSGHYSNYKENMYF------TIIDEQEYGIKPMNCVGHIKVYQSSPRSYRELPLRFYEYG 326

Query: 367 SVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK 426
            V+R+E SG LHGL+RVR FTQDDAH+FC   Q+ +E  +I +    I   FGF   M +
Sbjct: 327 IVHRHERSGVLHGLLRVREFTQDDAHIFCMTSQIKSEVNQILDFTKGIMNAFGFHYEM-E 385

Query: 427 LSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDA 486
           LSTRP+K +G+D +W++A   +K  L+      ++ I+  +  G GAFYGPK +  + DA
Sbjct: 386 LSTRPQKSIGNDEVWENATAALKSALE------ENHISYQIDEGGGAFYGPKIDIKITDA 439

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNL 546
           + R WQCGTIQ+D NLP RF   Y + H+ +  PVMIHRA+ GS ERF+ I+ E+F G  
Sbjct: 440 LKRKWQCGTIQIDMNLPERFELSYTDEHNVQVQPVMIHRAILGSFERFVAILTEHFGGEF 499

Query: 547 PLWLSPIQAIVTTITSSAVEYAQEIAN-LLKSHHLSIETDFRNETINYKIREHSIKKIPI 605
           PL+++P Q I+  I  + +EYA+ + + ++       E   +NE+++ KIR    +++P+
Sbjct: 500 PLFIAPTQVILIPIGEAQLEYARILRDKIITQSGAYAELMDKNESLSKKIRLAEKQRVPL 559

Query: 606 IIICGDKEASERSIGIR 622
           I++ G KE   + + IR
Sbjct: 560 IVVIGAKEVESKILAIR 576


>gi|41408814|ref|NP_961650.1| threonyl-tRNA synthetase [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|73919807|sp|Q73WE4|SYT_MYCPA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|41397173|gb|AAS05033.1| ThrS [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 684

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 251/637 (39%), Positives = 368/637 (57%), Gaps = 43/637 (6%)

Query: 35  AKKAVAVA--INGKVCDLS-DPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE 91
           A  AV V    +G + DLS  P  +  +  +        +VIRHS AH++A+AVQ ++P+
Sbjct: 35  APDAVVVVRDASGTLRDLSWVPDTDAEVVPVAANTDEGRSVIRHSAAHVLAQAVQELFPQ 94

Query: 92  VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQ-YLSHEKARELF 150
            ++ IGP I DGFYYDFD  +PF+ ++L ++EK+M++I+     F ++ Y S E+AR   
Sbjct: 95  AKLGIGPPITDGFYYDFDVPEPFTPEDLDKLEKRMRQIVKEGQLFSRRVYESKEQARA-- 152

Query: 151 ESKKEAYKVEILESIPAKENV--------TLY-------RQGEWFDLCRGPHVRSTGQVK 195
           E   E YK+E+++      ++        T Y       R+  W DLCRGPH+ +T  + 
Sbjct: 153 ELAGEPYKLELVDDKSGDPDIMEVGGDELTAYDNLNPRTRERVWGDLCRGPHIPTTRHIP 212

Query: 196 KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDL 255
            F KL + + AYWRGD N   L RIYGTAW +Q+ L  +L  +EE+++RDHRKL  E+DL
Sbjct: 213 AF-KLTRSSAAYWRGDQNNASLQRIYGTAWESQEALDDHLRLIEEAQRRDHRKLGSELDL 271

Query: 256 FHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDS 313
           F   ++ GSG+  +H +G  + + L  Y RRK I+  YE +NTP +    L+  SGH D 
Sbjct: 272 FSFPDEIGSGLAVFHPRGGVVRRELEEYSRRKHIEAGYEFVNTPHITKAQLFHTSGHLDW 331

Query: 314 YRANMFAVKCADDTIKDLRT-------FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFG 366
           Y   MF     D    D  T       + LKPMNCP H  ++    +SYRELP+RL EFG
Sbjct: 332 YADGMFPPMHLDAEYDDDGTVRKPGQDYYLKPMNCPMHTLIYRSRGRSYRELPLRLFEFG 391

Query: 367 SVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK 426
           +VYR E SG +HGL R RGFT DD+H+FCT+EQ+  E   +   ++ +  D+G     ++
Sbjct: 392 TVYRYEKSGVVHGLTRARGFTMDDSHIFCTREQLHGELASLLRFVLELLGDYGLTDFYLE 451

Query: 427 LSTR-PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKD 485
           LST+ P+K VGSD +W+ A   +  V      +++  +      G  AFYGPK     +D
Sbjct: 452 LSTKDPDKFVGSDEVWEQATTSLADV------AAESGLELVPDPGGAAFYGPKISVQARD 505

Query: 486 AIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           A+GR WQ  TIQVDFN P RF   Y  S   +  PVMIHRA+FGSIERF GI+ E++ G 
Sbjct: 506 ALGRSWQMSTIQVDFNFPERFELEYTASDGTRQRPVMIHRALFGSIERFFGILTEHYAGA 565

Query: 546 LPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPI 605
            P WL+P+QA+   +    V Y + +A  LKS+ + +E D  ++ +  KI  H+ +K+P 
Sbjct: 566 FPAWLAPVQAVGIPVADEHVPYLESVAAQLKSYGVRVEVDASDDRMAKKIVHHTAQKVPF 625

Query: 606 IIICGDKEASERSIGIRRFGSTT----TQKVSLLDAI 638
           +++ GD++ +  ++   RFG  T      + S +DAI
Sbjct: 626 MLLAGDRDVAAGAVSF-RFGDRTQINGVPRDSAVDAI 661


>gi|54025682|ref|YP_119924.1| threonyl-tRNA synthetase [Nocardia farcinica IFM 10152]
 gi|54017190|dbj|BAD58560.1| putative threonyl-tRNA synthetase [Nocardia farcinica IFM 10152]
          Length = 703

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 251/627 (40%), Positives = 363/627 (57%), Gaps = 47/627 (7%)

Query: 45  GKVCDLS-DPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG 103
           G + DLS  P  +  +E +        +VIRHS AH++A+AVQ  +PE ++ IGP I+DG
Sbjct: 63  GALRDLSWTPDTDVEVEAVPASTEAGRSVIRHSAAHVLAQAVQQEFPEAKLGIGPPIKDG 122

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE 163
           FYYDF  E+PF+ ++LA++E +M++II     F ++ +  E+AR   E   E +K+E++ 
Sbjct: 123 FYYDFQVERPFTPEDLARLESRMKKIIKGAQRFSRRVVEIEEARA--ELANEPFKLELIS 180

Query: 164 S-----------IPAKENVTLY-----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAG 205
                       +  KE +T+Y     R GE  W DLCRGPH+ +T  +  F KL + + 
Sbjct: 181 DKSGIDDPEVMEVGGKE-LTIYDNLDPRTGEKVWGDLCRGPHIPTTKFIPAF-KLTRSSA 238

Query: 206 AYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSG 264
           AYWRGD NR  L RIYGTAW + + L  +L+ L E+E+RDHRKL  E+DLF   ++ GSG
Sbjct: 239 AYWRGDQNREDLQRIYGTAWESPEALEAHLHVLAEAERRDHRKLGLELDLFSFPDELGSG 298

Query: 265 VIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKC 323
           +  +H KG  I + L  Y RR+ +   YE +NTP +   HL++ SGH D YR  MF    
Sbjct: 299 LPVFHPKGGIIRKELEEYSRRRHVDAGYEFVNTPHITKGHLFEVSGHLDWYRDGMFPAMH 358

Query: 324 ADDTIKDLRT-------FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            D    D  T       + +KPMNCP H  +F    +SYRELP+RL EFGSVYR E SG 
Sbjct: 359 LDAEYNDDGTVRKPGQDYYVKPMNCPMHNLIFRARGRSYRELPLRLFEFGSVYRYEKSGV 418

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR-PEKRV 435
           +HGL RVRG TQDDAH++CTKEQM  E       ++ +  D+G +   ++LST+ P+K V
Sbjct: 419 VHGLTRVRGMTQDDAHIYCTKEQMHAELTNTLQFVLGLLADYGLDDFYLELSTKDPKKFV 478

Query: 436 GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL----GEGAFYGPKFEYILKDAIGRDW 491
           GSD +W++A   +  V             +G+ L    G  AFYGPK     KDA+GR W
Sbjct: 479 GSDEIWEEATETLSKVAQA----------SGLELVPDPGGAAFYGPKISVQAKDALGRTW 528

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLS 551
           Q  TIQ+DFNLP RF   Y      K  PVMIHRA+FGSIERF G++ E++ G  P WLS
Sbjct: 529 QMSTIQLDFNLPERFGLEYTAPDGSKQRPVMIHRALFGSIERFFGVLTEHYAGAFPAWLS 588

Query: 552 PIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
           P+Q +   +  +   +   +  LL+ H +  + D  ++ +  KI  ++ +K+P +++ G+
Sbjct: 589 PVQVVGIPVAEAFAPHLDRVVELLRDHGVRAQVDRSDDRMQKKIFNNTAQKVPFMLLAGE 648

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAI 638
           ++ +  ++  R    T    V + DA+
Sbjct: 649 RDVNAGAVSFRFRDGTQVNGVPVADAV 675


>gi|126657277|ref|ZP_01728443.1| threonyl-tRNA synthetase [Cyanothece sp. CCY0110]
 gi|126621548|gb|EAZ92259.1| threonyl-tRNA synthetase [Cyanothece sp. CCY0110]
          Length = 607

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 245/584 (41%), Positives = 362/584 (61%), Gaps = 16/584 (2%)

Query: 51  SDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK 110
           S  V E  I++    +   L  IRH+ +H+MA AVQ ++P+ QV IGP  E GFYYDFD 
Sbjct: 7   SPEVLEQPIKLPRTSESDKLKRIRHTASHVMAMAVQKLFPKAQVTIGPWTETGFYYDFDV 66

Query: 111 EQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN 170
            +PF+  +L  I+K+M +II +  P  ++ +S E+A++     +E YK+EILE +  +  
Sbjct: 67  PEPFTDKDLKAIKKEMIKIIKKKLPLTREEVSAEEAKKRITELQEPYKLEILEGL--EPP 124

Query: 171 VTLYRQG-EWFDLCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQ 228
           +TLY  G +W+DLC GPHV +TG +  K F++  VAGAYWRGD  +  L RIYGTAW T 
Sbjct: 125 ITLYHLGDQWWDLCAGPHVETTGDLNPKAFEIESVAGAYWRGDETKAQLQRIYGTAWETP 184

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-K 286
           ++L +Y    EE+ KRDHR+L +E+ LF  ++  G G+  W  KG  I  TL  ++++ +
Sbjct: 185 EQLAEYKRRKEEALKRDHRRLGKELGLFIFSDPVGPGLPLWTPKGTIIRSTLEDFLKQEQ 244

Query: 287 IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT-FALKPMNCPGHV 345
           +K  Y  + TP +    L++ SGHW +Y+ +MF +   ++  K     F LKPMNCP H+
Sbjct: 245 LKRGYLPVVTPHIGRVDLFKISGHWQNYKEDMFPMMAENEEAKTSEMGFVLKPMNCPFHI 304

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            ++   L+SYR+LP+RLAEFG+VYR E SG L GL RVRGFT DD+H+F T +Q+ +E L
Sbjct: 305 QIYKSELRSYRDLPMRLAEFGTVYRYEQSGELGGLTRVRGFTVDDSHLFVTPDQLDDEFL 364

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTR---PEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
            + +LI+S+++    +    +LS R    +K +GS+  W+ AEN ++  + T+       
Sbjct: 365 NVVDLILSVFRSLQLKNFKARLSFRDPNSDKYIGSNEAWNKAENAIRRAVQTLD------ 418

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
           +N     GE AFYGPK ++I +DA+ R+WQ GT+QVD+NLP RF   YV     +  PVM
Sbjct: 419 MNYFEAEGEAAFYGPKLDFIFQDALEREWQLGTVQVDYNLPERFELEYVGEEGNRHRPVM 478

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSI 582
           IHRA FGS+ER IGI+IE + G+ PLWL+PIQ  +  ++   ++Y ++IAN + S  +  
Sbjct: 479 IHRAPFGSLERLIGILIEEYAGDFPLWLAPIQVRLLPVSDVQLDYVKDIANKMLSLGIRA 538

Query: 583 ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS 626
           E D   E +   IR    +KIP++ I G KE    ++ IR   S
Sbjct: 539 EADTSGERLGKMIRNGEKQKIPVMAIVGAKEVEANALSIRTRAS 582


>gi|292655832|ref|YP_003535729.1| threonyl-tRNA synthetase [Haloferax volcanii DS2]
 gi|291370664|gb|ADE02891.1| threonyl-tRNA synthetase [Haloferax volcanii DS2]
          Length = 643

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 246/639 (38%), Positives = 377/639 (58%), Gaps = 29/639 (4%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEI 61
           SDI +  PDG+  +    AT  D A +I   L K  VA  ++G++ D   P+ +G+ + I
Sbjct: 2   SDIAVILPDGTELSVEEGATVRDAAFAIGPGLGKDTVAGVVDGELVDKETPLHDGADLVI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF---DKEQPFSSDE 118
           +T +    L V+RHS AH+ A+A+Q + PE ++ IGP  +DGFYYD    D EQ    ++
Sbjct: 62  VTDQSDEYLDVLRHSAAHVFAQALQRLHPEAKLTIGPWTDDGFYYDVTSVDLEQ----ED 117

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQG 177
           L  IE +M++II  D    +  +  E+A E +      YK +ILE   A ++ ++ Y+QG
Sbjct: 118 LEAIEDEMRDIIEEDLDIERVVVDREEALEKYADN--PYKRDILEEEAAGDDELSFYQQG 175

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           E+ DLC+GPHV STG++    KL+ ++ AYWRGD +   L+R+YGTA+ ++ +L ++L  
Sbjct: 176 EFEDLCKGPHVESTGEIGAV-KLLNISAAYWRGDEDNDTLTRVYGTAFESESDLEEFLEM 234

Query: 238 LEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEIN 295
            EE+++RDHRKL +E++LF I E  G G+  +   G +I   L  Y ++  +   Y+ + 
Sbjct: 235 REEAKERDHRKLGQELNLFAIDETTGPGLPLYQPNGKRILDELADYAKQLNLDAGYDPVE 294

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP +    LW++SGH+++Y  +MF +   D+       + LKPMNCPGH  +F+    SY
Sbjct: 295 TPHLFRTELWKKSGHYENYVDDMFLLDVNDEE------YGLKPMNCPGHATIFDQQSWSY 348

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           R+LPVR  E G VYR E  G L GL RV  FT DD H+F   +Q+ +E   I + I++++
Sbjct: 349 RDLPVRYFEDGKVYRKEQRGELSGLSRVWSFTIDDGHLFVRPDQIEDEINLIIDNILTVF 408

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
             FG +   V L+TRP+K VGSD +W+ AE  ++ VLD         I+ G+  G+GAFY
Sbjct: 409 DTFGLDA-EVALATRPDKSVGSDEIWEQAETQLRAVLDDSG------IDYGIEAGDGAFY 461

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++  KDA+GR W   T+Q+DFN+P RF+  Y    +E   PVMIHRA++GS ERF 
Sbjct: 462 GPKIDFAFKDALGRKWDGPTVQLDFNMPDRFDLTYTGEDNEDHQPVMIHRALYGSYERFF 521

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE+F G  P WL+P Q  +  I+   + YA+++   L    + IE   R+ T+  KI
Sbjct: 522 MVLIEHFNGKFPFWLAPEQVRILPISDDQIGYAKKLQYELNDFRVDIED--RSWTLGRKI 579

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           RE    ++P ++I G  E  + +I +R       + VS+
Sbjct: 580 REAQTDRVPYMVIVGGDEEEDGTISVRDRKEREAKDVSV 618


>gi|312132685|ref|YP_004000024.1| thrs [Bifidobacterium longum subsp. longum BBMN68]
 gi|322689212|ref|YP_004208946.1| threonyl-tRNA synthase [Bifidobacterium longum subsp. infantis
           157F]
 gi|311773642|gb|ADQ03130.1| ThrS [Bifidobacterium longum subsp. longum BBMN68]
 gi|320460548|dbj|BAJ71168.1| threonyl-tRNA synthase [Bifidobacterium longum subsp. infantis
           157F]
          Length = 677

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 254/637 (39%), Positives = 371/637 (58%), Gaps = 51/637 (8%)

Query: 36  KKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           K  +AV ING+  DL  P+ +G +++ I  +    LA++RHS  H+MA+AVQ ++P  ++
Sbjct: 31  KNIIAVKINGENRDLYTPLNDGDTVDPIALDSEDGLAIMRHSATHVMAQAVQEVYPNAKL 90

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            +GP+I+DGFYYDF  +QPF+ D+L  IEK+MQ II     F ++ ++ E+A  L E   
Sbjct: 91  GVGPVIKDGFYYDFQVDQPFTPDDLKDIEKRMQRIIKSSQSFRRRSVTEEEA--LKEEAD 148

Query: 155 EAYKVEILESIPA-----------KENVTLY----RQGE--WFDLCRGPHVRSTGQVKKF 197
           + +K+E++E   A           ++ ++ Y    R G   W DLCRGPH+ +T  +K F
Sbjct: 149 QPFKIELIEDKEAHLDPAAATEISEKELSFYDNVDRDGNVVWKDLCRGPHLPNTRYIKAF 208

Query: 198 FKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFH 257
            K+ + A AYWRG    P + RIYGTAW T+++L  Y   LEE+ KRDHRKL  EMDLF 
Sbjct: 209 -KIERSAAAYWRGSEKNPTMQRIYGTAWATKEDLKAYQTRLEEAAKRDHRKLGAEMDLFS 267

Query: 258 IAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYR 315
             ++ G G+  +H KG  +   +  Y R    K  Y  + TP +    L++ SGH   Y+
Sbjct: 268 FPDEIGPGLAVFHPKGAAVINAMEDYSREMHRKHHYSFVQTPHITKGGLYETSGHLHWYK 327

Query: 316 ANMFAV------KCADDTI-KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV 368
             M+        K AD  I K    + LKPMNCP H  +F    +SYRELP+RL EFG+V
Sbjct: 328 DGMYPPMHLDEEKDADGNITKPGADYYLKPMNCPMHNLIFKSRQRSYRELPLRLFEFGTV 387

Query: 369 YRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLS 428
           YR E SG +HGL RVRG TQDD+H++CT+EQM +E   +   ++++ KDFG     ++LS
Sbjct: 388 YRYEKSGEVHGLTRVRGLTQDDSHIYCTREQMKDELTSLLTFVLNLLKDFGLTDFYLELS 447

Query: 429 TR-PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAI 487
           T+ P K VGSD +W++A N +  V    K S+ + ++        AFYGPK     +DAI
Sbjct: 448 TKDPNKYVGSDEIWEEATNTLAEV---AKESNLELVDDPC---GAAFYGPKISVQARDAI 501

Query: 488 GRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           GR WQ  TIQ+DFNLP RF   Y+        PVMIHRA+FGSIERF  +++E++ G  P
Sbjct: 502 GRTWQVSTIQLDFNLPERFQLEYIAKDGTHQRPVMIHRALFGSIERFFAVLLEHYAGAFP 561

Query: 548 LWLSPIQAIVTTITSSAVEYAQEIANLLKS---HHLSIETDFRNETINYKIREHSIKKIP 604
            WL+P+Q +   +   A E+A  +A  +KS     +  E D+ ++    KIR  S  K+P
Sbjct: 562 AWLAPVQVLGVPV---ADEFAPHLAGFVKSLEDEMVRCEIDYSDDRFGKKIRNASKSKVP 618

Query: 605 IIIICGDKEASERSIGIR-RFGSTTTQKVSLLDAIPI 640
            I+I G+++ +  ++  R R GS        L+ +P+
Sbjct: 619 FILIVGEEDMNNNAVSFRFRDGSQ-------LNGVPV 648


>gi|65319684|ref|ZP_00392643.1| COG0441: Threonyl-tRNA synthetase [Bacillus anthracis str. A2012]
          Length = 485

 Score =  464 bits (1195), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 221/478 (46%), Positives = 336/478 (70%), Gaps = 16/478 (3%)

Query: 159 VEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLS 218
           +E+LE+IP+ E+VTLY+QGE+ DLCRGPH+ STG +K  F+L  V+GAYWRGDSN  +L 
Sbjct: 7   LELLEAIPSGESVTLYKQGEFVDLCRGPHLPSTGYLK-VFQLTHVSGAYWRGDSNNQVLQ 65

Query: 219 RIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQT 278
           RIYG A+++Q+EL +YL+F+EE+ KR+HRKL  E++LF  +E+  G+ F+  KG  I   
Sbjct: 66  RIYGVAFSSQKELEEYLHFVEEAAKRNHRKLGNELELFMFSEEAPGMPFYLPKGQIIRNE 125

Query: 279 LISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALK 337
           L +++R   K+ +Y+E+ TP +++Q +W++SGHW  Y+ NM+  +       D ++FALK
Sbjct: 126 LEAFLREIQKEYNYQEVRTPFMMNQEVWERSGHWGHYKDNMYFSEV------DNKSFALK 179

Query: 338 PMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK 397
           PMNCPGH+ +F + L SYRELP+R+ EFG V+R+E SG+L+GL+RVR F QDDAH+F T 
Sbjct: 180 PMNCPGHMLMFKNKLHSYRELPIRMCEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTP 239

Query: 398 EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKN 457
           EQ+ +E   +   I  +YK FGFE   V+LSTRPE  +G D LW+ AE  ++ VL ++  
Sbjct: 240 EQIEDEIKSVMAQIDYVYKTFGFE-YEVELSTRPEDSMGDDELWEQAEASLENVLQSL-- 296

Query: 458 SSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK 517
           + + R+N     G+GAFYGPK ++ +KDA+ R  QCGTIQ+DF +P +F+  Y++  +EK
Sbjct: 297 NYKYRLNE----GDGAFYGPKIDFHIKDALNRSHQCGTIQLDFQMPEKFDLNYIDEKNEK 352

Query: 518 CHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLK 576
             PV+IHRAV GS++RF+ I+IE+F G  P W++P+Q  V  ++++  V+YA E+A+ L 
Sbjct: 353 RRPVVIHRAVLGSLDRFLAILIEHFGGAFPAWVAPVQVKVIPVSNAVHVQYADEVADKLA 412

Query: 577 SHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
              + +E D R+E + YKIRE  ++K+P +++ GDKE    ++ +R++G   +  + L
Sbjct: 413 QAGVRVERDMRDEKLGYKIREAQMQKVPYVLVIGDKEMENGAVNVRKYGEEKSGVIEL 470


>gi|156740370|ref|YP_001430499.1| threonyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
 gi|156231698|gb|ABU56481.1| threonyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
          Length = 595

 Score =  464 bits (1194), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 234/568 (41%), Positives = 352/568 (61%), Gaps = 30/568 (5%)

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIAR 132
           +RHS AH+MA+AV  ++PE ++AIGP IEDGFYYDFD  +P + D+L +IEK+M+ IIA 
Sbjct: 13  LRHSAAHVMAQAVLELFPEGKIAIGPPIEDGFYYDFDLPRPLTPDDLEEIEKRMRRIIAG 72

Query: 133 DSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-----------VTLYRQGEWFD 181
             PF+ + +  ++AR LF  + + YK+E+++ +   ++           ++ YR   + D
Sbjct: 73  KHPFVYRVVDPDEARALF--RDQPYKLELIDGLLHGQDEYGEQGSTNTVISTYRHDTFED 130

Query: 182 LCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           LCRGPH+  TGQ+    FKLM VAGAYWRGDSNRPML RIYGTAWN+++EL  YL+ LEE
Sbjct: 131 LCRGPHLEHTGQIPPDAFKLMSVAGAYWRGDSNRPMLQRIYGTAWNSKEELDAYLHRLEE 190

Query: 241 SEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           +++RDHR++ +E+ LF+ +ED G G+  +  KG  +   + SY+R  + +  Y+ + T  
Sbjct: 191 AKRRDHRRIGKELGLFYFSEDIGPGLPLFTPKGEMLRHLMESYVREVQTRYGYQHVWTGH 250

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH-GLKSYRE 357
           ++ + L+++SGH+++YR NMF     D+       + LKPMNCP H+ ++   G+ SYR+
Sbjct: 251 IVKETLYKKSGHYEAYRENMFPPMIEDEE----HVYRLKPMNCPSHMTLYKEMGIHSYRD 306

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R AEF ++YR E  G+L GL RVR  TQDD H+FC  +Q+  E      LI  + + 
Sbjct: 307 LPLRFAEFATLYRYEERGTLTGLTRVRALTQDDCHIFCRPDQIEEEFGLALRLIREVLET 366

Query: 418 FGFEKIMVKLSTRPE--KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           + F    V+LS R E  K +  D  WD AE  ++  LD      ++        GE A Y
Sbjct: 367 YRFTNYRVRLSLRGEGGKYIADDEAWDLAERALRTALDHYSVQYEE------APGEAAIY 420

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +++  D +GR+WQ  TIQVDF  P R    Y+    +   PV++HRAV G+ ERF+
Sbjct: 421 GPKADFLAHDVLGREWQLSTIQVDFIQPRRLGLEYIAEDGQPRTPVVLHRAVTGTTERFM 480

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
           G++IE+F G  PLWL+P+QA+V  I+      YA ++   L +  L +E D   E +  K
Sbjct: 481 GVLIEHFAGAFPLWLAPVQAVVIPISDERHGAYAADVGRQLTAAGLRVEVDLSRERMQAK 540

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIR 622
           IR+  ++KIP ++I GD+E    ++ +R
Sbjct: 541 IRQAQLQKIPYMLIIGDREQHAGAVAVR 568


>gi|291516871|emb|CBK70487.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Bifidobacterium
           longum subsp. longum F8]
          Length = 677

 Score =  464 bits (1194), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 253/639 (39%), Positives = 372/639 (58%), Gaps = 51/639 (7%)

Query: 36  KKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           K  +AV ING+  DL  P+ +G +++ I  +    LA++RHS  H+MA+AVQ ++P  ++
Sbjct: 31  KNIIAVKINGENRDLYTPLNDGDTVDPIALDSEDGLAIMRHSATHVMAQAVQEVYPNAKL 90

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            +GP+I+DGFYYDF  +QPF+ ++L  IEK+MQ II     F ++ ++ E+A  L E   
Sbjct: 91  GVGPVIKDGFYYDFQVDQPFTPNDLKDIEKRMQRIIKSSQSFRRRSVTEEEA--LKEEAD 148

Query: 155 EAYKVEILESIPA-----------KENVTLY----RQGE--WFDLCRGPHVRSTGQVKKF 197
           + +K+E++E   A           ++ ++ Y    R G   W DLCRGPH+ +T  +K F
Sbjct: 149 QPFKIELIEDKEAHLDPAAATEISEKELSFYDNVDRDGNVVWKDLCRGPHLPNTRYIKAF 208

Query: 198 FKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFH 257
            K+ + A AYWRG    P + R+YGTAW T+++L  Y   LEE+ KRDHRKL  EMDLF 
Sbjct: 209 -KIERSAAAYWRGSEKNPTMQRVYGTAWATKEDLKAYQTRLEEAAKRDHRKLGAEMDLFS 267

Query: 258 IAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYR 315
             ++ G G+  +H KG  +   +  Y R    K  Y  + TP +    L++ SGH   Y+
Sbjct: 268 FPDEIGPGLAVFHPKGAAVINAMEDYSREMHCKHHYSFVQTPHITKGGLYETSGHLHWYK 327

Query: 316 ANMFAV------KCADDTI-KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV 368
             M+        K AD  I K    + LKPMNCP H  +F    +SYRELP+RL EFG+V
Sbjct: 328 DGMYPPMHLDEEKDADGNITKPGADYYLKPMNCPMHNLIFKSRQRSYRELPLRLFEFGTV 387

Query: 369 YRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLS 428
           YR E SG +HGL RVRG TQDD+H++CT+EQM +E   +   ++++ KDFG     ++LS
Sbjct: 388 YRYEKSGEVHGLTRVRGLTQDDSHIYCTREQMKDELTSLLTFVLNLLKDFGLTDFYLELS 447

Query: 429 TR-PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAI 487
           T+ P K VGSD +W++A N +  V    K S+ + ++        AFYGPK     +DAI
Sbjct: 448 TKDPNKYVGSDEIWEEATNTLAEV---AKESNLELVDDPC---GAAFYGPKISVQARDAI 501

Query: 488 GRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           GR WQ  TIQ+DFNLP RF   Y+        PVMIHRA+FGSIERF  +++E++ G  P
Sbjct: 502 GRTWQVSTIQLDFNLPERFQLEYIAKDGTHQRPVMIHRALFGSIERFFAVLLEHYAGAFP 561

Query: 548 LWLSPIQAIVTTITSSAVEYAQEIANLLKS---HHLSIETDFRNETINYKIREHSIKKIP 604
            WL+P+Q +   +   A E+A  +A  +KS     +  E D+ ++    KIR  S  K+P
Sbjct: 562 AWLAPVQVLGVPV---ADEFAPHLAGFVKSLEDEMVRCEIDYSDDRFGKKIRNASKSKVP 618

Query: 605 IIIICGDKEASERSIGIR-RFGSTTTQKVSLLDAIPILT 642
            I+I G+++ +  ++  R R GS        L+ +P+ T
Sbjct: 619 FILIVGEEDMNNNAVSFRFRDGSQ-------LNGVPVDT 650


>gi|312195608|ref|YP_004015669.1| threonyl-tRNA synthetase [Frankia sp. EuI1c]
 gi|311226944|gb|ADP79799.1| threonyl-tRNA synthetase [Frankia sp. EuI1c]
          Length = 662

 Score =  464 bits (1193), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 248/661 (37%), Positives = 381/661 (57%), Gaps = 38/661 (5%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI-EI 61
           SD+++T      ++  V  TG+  A+  +    +  +A  + G+  DL+  + +G + E 
Sbjct: 2   SDLRVTVQHAEQRDDRVVTTGTTAADLFAAD--RSVIAARVGGQQRDLAHVLADGDVVEP 59

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           IT + P   A++RHS AH++A+AVQ ++P+ ++ IGP I++GFYYDFD E+PFS+++L  
Sbjct: 60  ITVDSPDGRAIVRHSTAHVVAQAVQDLFPKARLGIGPPIQNGFYYDFDVEKPFSAEDLKA 119

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKAR----------ELFESKKEAYKVEILESIPAKE-- 169
           IEK+ +EI+     F ++ ++ + AR          EL   K  A +V+  ++  A E  
Sbjct: 120 IEKRAREIVKAGQRFSRRAVTDDAARAELADEPYKLELIGLKSSAGEVDANDADAAVEVG 179

Query: 170 --NVTLY-----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRI 220
              +T+Y     + GE  W DLCRGPHV +T  +  F  + + A AYWRG    P L RI
Sbjct: 180 AGELTIYDNLDAKTGELCWKDLCRGPHVPTTRHIPAF-AIQRSAAAYWRGSEKNPQLQRI 238

Query: 221 YGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTL 279
           YGTAW ++  L  +L  L E+EKRDHR+L  E+DLF    E G G+  +H KG  I   +
Sbjct: 239 YGTAWESKDALAGHLAMLAEAEKRDHRRLGAELDLFSFPTELGPGLAVFHPKGGAIRTVM 298

Query: 280 ISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKP 338
             Y RR+ I+  YE +NTP +    L++ SGH D +   M+     D        + LKP
Sbjct: 299 EDYSRRRHIEAGYEFVNTPHITKSTLYEISGHLDWFADGMYPPMSLDGGTD----YYLKP 354

Query: 339 MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE 398
           MNCP H+ +F    +SYRELP+RL EFG+VYR E SG +HGL RVRG TQDDAH+FC ++
Sbjct: 355 MNCPMHILIFKSRGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRVRGLTQDDAHLFCARD 414

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE-KRVGSDALWDDAENIMKGVLDTIKN 457
           Q+  E       ++ + +D+G     ++LSTRPE K +G+D  W+ A ++++      + 
Sbjct: 415 QLPEELDSTLKFVLGLLRDYGLTDFYLELSTRPEGKAIGTDEEWEQATSLLR------EA 468

Query: 458 SSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK 517
           + +  +   +  G GAFYGPK     KDAIGR WQ  TIQVDF LP RF+  Y  +   +
Sbjct: 469 AEKQDLELVMDPGGGAFYGPKISVQAKDAIGRTWQLSTIQVDFQLPQRFDMEYQAADGTR 528

Query: 518 CHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKS 577
             P MIHRA+FG+IERF  I++E++ G +P WL+P+Q +   IT   V Y +++A  L +
Sbjct: 529 QRPFMIHRALFGTIERFFAILLEHYAGAMPPWLAPVQVVGIPITDEHVPYLKDVAAKLTA 588

Query: 578 HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
             + +E D  +  +  KIR+   +K+P ++I G  + ++ ++  R    T    V + +A
Sbjct: 589 KGIRVEVDASDNRMQKKIRDAQKQKVPYMLIAGADDVAKDAVSFRYRDGTQRNAVPVDEA 648

Query: 638 I 638
           +
Sbjct: 649 V 649


>gi|326201675|ref|ZP_08191546.1| threonyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
 gi|325988275|gb|EGD49100.1| threonyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
          Length = 645

 Score =  463 bits (1192), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 246/630 (39%), Positives = 382/630 (60%), Gaps = 26/630 (4%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           IK+T  DGS K +    T  +VAESIS  LA+ A+A  ++G+V +L   +  + ++ ++T
Sbjct: 2   IKVTLKDGSSKEYQSGITIKEVAESISAGLARAALAGEVDGRVKELDFKLENDCALSLLT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
             D       RH+ +H++A+AV+ ++P +++AIGP IE+GFYYDFD E+ F+ ++LA+IE
Sbjct: 62  FADEGGRLAYRHTASHVLAQAVKRLFPNIKLAIGPAIENGFYYDFDTEKNFAPEDLAKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M++II  D    +  L  E+A +  E K E YKVE+++ +P  E ++ Y+QG++ DLC
Sbjct: 122 KEMEKIIKEDISLERFTLPREEAIKFMEDKGEPYKVELIKDLPEGEEISFYKQGDFVDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+ STG++K   KLM  AGAYWRG+    ML RIYGTA+  + EL +Y+  LEE++K
Sbjct: 182 AGPHLLSTGKLKAV-KLMSAAGAYWRGNEKNKMLQRIYGTAFPKKSELEEYVTKLEEAKK 240

Query: 244 RDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKDDYEE-----INTP 297
           RDH KL RE++LF   E+ G G+     KG +I QTL    +R ++D+ E        TP
Sbjct: 241 RDHNKLGRELELFTTVEEIGQGLPLLMPKGARIVQTL----QRFVEDEEERRGYVLTKTP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    L++ SGHW  Y+  MF +    D  KD    AL+PM CP    ++N  L SYR+
Sbjct: 297 FMAKSDLYKLSGHWQHYKDGMFLL---GDEEKDEEVMALRPMTCPFQFMIYNTKLHSYRD 353

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R  E  +++RNE SG +HGL+RVR FT  + H+ CT EQ+ +E   + +LI  + + 
Sbjct: 354 LPIRYGETSTLFRNEASGEMHGLIRVRQFTISEGHLVCTPEQLEDEFKGVVDLIKFMMET 413

Query: 418 FGFEK-IMVKLST----RPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
            G E+ +  + S       EK +G++  W++ +  M+ +LD +K      ++     GE 
Sbjct: 414 LGIEEDVTYRFSKWDPKNKEKYIGNEEDWENVQGQMRTILDHLK------LDYKEAEGEA 467

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           AFYGPK +   K+  G++    T+QVDF L  R +  YV+ ++EK HP +IHR   G  E
Sbjct: 468 AFYGPKLDIQCKNVHGKEDTIITVQVDFALAERLSMVYVDKNNEKKHPYIIHRTSIGCYE 527

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
           R + ++IE + G  P WL P+QA +  +     ++AQ++A +L+   + +E D RNE I 
Sbjct: 528 RTLAMLIEKYAGAFPTWLCPVQAKILPLVDKHHDFAQKVAQMLRDKGVKVEVDTRNEKIG 587

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIR 622
           YKIRE  ++KIP +++ GDKE    ++ +R
Sbjct: 588 YKIREAQMEKIPYMLVIGDKEMESNAVSVR 617


>gi|331697398|ref|YP_004333637.1| threonyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190]
 gi|326952087|gb|AEA25784.1| threonyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190]
          Length = 682

 Score =  463 bits (1192), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 252/648 (38%), Positives = 375/648 (57%), Gaps = 48/648 (7%)

Query: 10  PDGSIKNFPVHAT-GSDVAESISRSLAKKAVAVA--INGKVCDLS-DPVREGSIEIITPE 65
           P  +    P   T G+ V E+   +   +AV V    +G++ DL+  P  +  +E +  +
Sbjct: 8   PASATVRVPAGTTAGAAVREAGLPANGPEAVVVVRDPDGRLRDLAWAPEADVDVEAVPAD 67

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
                +VIRHS AH++A+AVQ + PE ++ IGP I DGFYYDFD   PF+ D+L ++E  
Sbjct: 68  SEDGRSVIRHSAAHVLAQAVQQLHPEAKLGIGPPIRDGFYYDFDVATPFTPDDLKKLESA 127

Query: 126 MQEIIARDSPF-LKQYLSHEKARELFESKKEAYKVEILE---------SIPAKENVTLY- 174
           M++II     F  +++   ++AR+  E   E YK+E+++          I A   +T+Y 
Sbjct: 128 MKKIIKAGQRFSRRRFADKDEARK--ELADEPYKLELIDLKGPEEDVVEIDASGELTIYD 185

Query: 175 ----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQ 228
                 GE  W DLCRGPH+ +T  +  F  L + A AYWRGD   P L RIYGTAW +Q
Sbjct: 186 NVHAHTGETVWSDLCRGPHLPTTRYIPAF-SLTRTAAAYWRGDEKNPQLQRIYGTAWESQ 244

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKI 287
           + L  YL  + E+E+RDHR+L  E+DLF   +  GSG+  +H KG  + + L  Y RR+ 
Sbjct: 245 EALDAYLERVAEAERRDHRRLGAELDLFSFPDQIGSGLAVFHPKGGIVRKELEDYSRRRH 304

Query: 288 KD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFA------VKCADDTI-KDLRTFALKPM 339
           +   YE +NTP +    L++ SGH + Y   M+        + AD  + K  + + LKPM
Sbjct: 305 EQAGYEFVNTPHITKGQLFRTSGHLEWYEEGMYPGMILDEERDADGNVRKPGQDYYLKPM 364

Query: 340 NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQ 399
           NCP H  +F+   +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDDAH++CT+EQ
Sbjct: 365 NCPMHNLIFDARGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYCTEEQ 424

Query: 400 MFNECLKIHNLIISIYKDFGFEKIMVKLSTR-PEKRVGSDALWDDAENIMKGVLDTIKNS 458
           M  E   +   ++ + +D+G +   ++LSTR PEK +GSD  W+ A N+++ V +     
Sbjct: 425 MEGEIASLLQFVLELLRDYGLDDFYLELSTRNPEKSIGSDEAWERATNVLRKVAE----- 479

Query: 459 SQDRINTGVLL----GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH 514
                 TG+ L    G  AFY PK     KDAIGR WQ  TIQVD  LP RF+  Y  S 
Sbjct: 480 -----ETGLHLVDDPGGAAFYAPKISVQAKDAIGRTWQMSTIQVDLMLPDRFDLEYTASD 534

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANL 574
             +  PVMIHRA+FGSIERF  +++E++ G  P WL+P+Q +   +T    EY +++A  
Sbjct: 535 GSRKRPVMIHRALFGSIERFFAVLLEHYAGAFPAWLAPVQVVGIPVTDDQREYVEQVAAT 594

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           L+   + +E D  ++ +  KIR H+++K+P +++ G ++    ++  R
Sbjct: 595 LRERGVRVEVDSGDDRMQKKIRTHTLQKVPFMLVVGARDVEAGAVSFR 642


>gi|239621470|ref|ZP_04664501.1| threonyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
           CCUG 52486]
 gi|239515931|gb|EEQ55798.1| threonyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
           CCUG 52486]
          Length = 686

 Score =  463 bits (1192), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 253/639 (39%), Positives = 372/639 (58%), Gaps = 51/639 (7%)

Query: 36  KKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           K  +AV ING+  DL  P+ +G +++ I  +    LA++RHS  H+MA+AVQ ++P  ++
Sbjct: 40  KNIIAVKINGENRDLYTPLNDGDTVDPIALDSEDGLAIMRHSATHVMAQAVQEVYPNAKL 99

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            +GP+I+DGFYYDF  +QPF+ ++L  IEK+MQ II     F ++ ++ E+A  L E   
Sbjct: 100 GVGPVIKDGFYYDFQVDQPFTPNDLKDIEKRMQRIIKSSQSFRRRSVTEEEA--LKEEAD 157

Query: 155 EAYKVEILESIPA-----------KENVTLY----RQGE--WFDLCRGPHVRSTGQVKKF 197
           + +K+E++E   A           ++ ++ Y    R G   W DLCRGPH+ +T  +K F
Sbjct: 158 QPFKIELIEDKEAHLDPAAATEISEKELSFYDNVDRDGNVVWKDLCRGPHLPNTRYIKAF 217

Query: 198 FKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFH 257
            K+ + A AYWRG    P + R+YGTAW T+++L  Y   LEE+ KRDHRKL  EMDLF 
Sbjct: 218 -KIERSAAAYWRGSEKNPTMQRVYGTAWATKEDLKAYQTRLEEAAKRDHRKLGAEMDLFS 276

Query: 258 IAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYR 315
             ++ G G+  +H KG  +   +  Y R    K  Y  + TP +    L++ SGH   Y+
Sbjct: 277 FPDEIGPGLAVFHPKGAAVINAMEDYSREMHRKHHYSFVQTPHITKGGLYETSGHLHWYK 336

Query: 316 ANMFAV------KCADDTI-KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV 368
             M+        K AD  I K    + LKPMNCP H  +F    +SYRELP+RL EFG+V
Sbjct: 337 DGMYPPMHLDEEKDADGNITKPGADYYLKPMNCPMHNLIFKSRQRSYRELPLRLFEFGTV 396

Query: 369 YRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLS 428
           YR E SG +HGL RVRG TQDD+H++CT+EQM +E   +   ++++ KDFG     ++LS
Sbjct: 397 YRYEKSGEVHGLTRVRGLTQDDSHIYCTREQMKDELTSLLTFVLNLLKDFGLTDFYLELS 456

Query: 429 TR-PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAI 487
           T+ P K VGSD +W++A N +  V    K S+ + ++        AFYGPK     +DAI
Sbjct: 457 TKDPNKYVGSDEIWEEATNTLAEV---AKESNLELVDDPC---GAAFYGPKISVQARDAI 510

Query: 488 GRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           GR WQ  TIQ+DFNLP RF   Y+        PVMIHRA+FGSIERF  +++E++ G  P
Sbjct: 511 GRTWQVSTIQLDFNLPERFQLEYIAKDGTHQRPVMIHRALFGSIERFFAVLLEHYAGAFP 570

Query: 548 LWLSPIQAIVTTITSSAVEYAQEIANLLKS---HHLSIETDFRNETINYKIREHSIKKIP 604
            WL+P+Q +   +   A E+A  +A  +KS     +  E D+ ++    KIR  S  K+P
Sbjct: 571 AWLAPVQVLGVPV---ADEFAPHLAGFVKSLEDEMVRCEIDYSDDRFGKKIRNASKSKVP 627

Query: 605 IIIICGDKEASERSIGIR-RFGSTTTQKVSLLDAIPILT 642
            I+I G+++ +  ++  R R GS        L+ +P+ T
Sbjct: 628 FILIVGEEDMNNNAVSFRFRDGSQ-------LNGVPVDT 659


>gi|269126329|ref|YP_003299699.1| threonyl-tRNA synthetase [Thermomonospora curvata DSM 43183]
 gi|268311287|gb|ACY97661.1| threonyl-tRNA synthetase [Thermomonospora curvata DSM 43183]
          Length = 684

 Score =  463 bits (1192), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 244/640 (38%), Positives = 370/640 (57%), Gaps = 37/640 (5%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSCAH 79
           A G+   +++     K  +A  +NG++ DL   VR+G  +E +  +     A++RHS AH
Sbjct: 47  AAGTTAGQALEAD-GKTVIAARVNGELRDLDYEVRDGDEVEPVAIDTEDGRAILRHSTAH 105

Query: 80  IMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQ 139
           +MA+AVQ ++PE ++ IGP +E+GFYYDFD  +PF+ ++L +IEK+M+EII +   F ++
Sbjct: 106 VMAQAVQELFPEAKLGIGPPVENGFYYDFDVARPFTPEDLKRIEKRMREIIKQGQRFSRR 165

Query: 140 YLSHEKARELFESKKEAYKVEILE-----------SIP-AKENVTLY-----RQGE--WF 180
            +S E+AR   E   E YK+E+++           S+      +T+Y     + GE  W 
Sbjct: 166 PVSDEQARA--ELADEPYKLELIDLKGGASADDGSSVEVGAGQLTIYDNLDAKTGEVCWK 223

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ +T  +  F KLM+  GAYWRG    P L RIYGTAW +++    YL  LEE
Sbjct: 224 DLCRGPHLPTTRHIPAF-KLMRSGGAYWRGSEKNPQLQRIYGTAWESRERQDAYLKMLEE 282

Query: 241 SEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQ 298
           +EKRDHRKL  E+DLF      G G+  WH KG  + + +  Y R R ++  YE + TP 
Sbjct: 283 AEKRDHRKLGVELDLFSFPSAIGGGLAVWHPKGGIVRKVMEDYSRKRHLEAGYEFVVTPH 342

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L++ SGH D Y   M+     D       T+  KPMNCP H+ +F    +SYREL
Sbjct: 343 LSKSTLFETSGHLDWYAEGMYPPMELDGA-----TYYPKPMNCPMHIMIFKARGRSYREL 397

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+ E G+VYR E SG LHGL R RGFTQDDAH+F   +Q+  E   +   ++ + +D+
Sbjct: 398 PLRMFELGTVYRYEKSGVLHGLTRARGFTQDDAHIFVAPDQLAEELASLLKFVVGLLRDY 457

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           G  +   +L+TRPEK VG  A W+ A+  ++  L       +  +   +  GEGAFY PK
Sbjct: 458 GLTEFEAELATRPEKYVGEIADWEKAQAALEHAL------QEAGLPYVIAEGEGAFYAPK 511

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +  ++DAIGR WQ  T+QVD  LP RF+  +  +   +  P MIHRA+FGS+ERF  I+
Sbjct: 512 IDVHIRDAIGRRWQLSTLQVDLQLPQRFDLEFQAADGTRQRPYMIHRALFGSVERFFAIL 571

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           +E++ G LP WL+P+Q +   I +S V + +++   L++  +  E D  ++ +  KIR  
Sbjct: 572 LEHYAGALPPWLAPVQVVGIPIGASHVPHLEKVVAQLRARGIRAEVDASDDRMQKKIRNA 631

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
              KIP +++ GD + S+ ++  R         V + +A+
Sbjct: 632 QKAKIPYMLLAGDDDVSKDAVSFRYRSGEQKNGVPIPEAV 671


>gi|240170657|ref|ZP_04749316.1| threonyl-tRNA synthetase [Mycobacterium kansasii ATCC 12478]
          Length = 697

 Score =  463 bits (1192), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 253/619 (40%), Positives = 368/619 (59%), Gaps = 53/619 (8%)

Query: 45  GKVCDLSDPVREGSIEII----TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII 100
           GK+ DLS  V +  +E+I      +D RS  VIRHS AH++A+AVQ ++P  ++ IGP I
Sbjct: 60  GKLRDLS-WVPDADVEVIPVPANTDDGRS--VIRHSTAHVLAQAVQELFPHAKLGIGPPI 116

Query: 101 EDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQ-YLSHEKARELFESKKEAYKV 159
            DGFYYDFD  +PF+ ++LA +EK+M++I+     F ++ Y S ++AR   E   E YK+
Sbjct: 117 TDGFYYDFDVAEPFTPEDLAALEKRMRQIVKEGQLFDRRVYESKDQARA--ELANEPYKL 174

Query: 160 EILESIPAKENV--------TLY-------RQGEWFDLCRGPHVRSTGQVKKFFKLMKVA 204
           E+++      +V        T Y       RQ  W DLCRGPH+ +T  +  F KL + +
Sbjct: 175 ELVDDKSGDPDVMEVGGDELTAYDNLNPRTRQRVWGDLCRGPHIPTTKHIPAF-KLTRSS 233

Query: 205 GAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GS 263
            AYWRGD     L RIYGTAW +Q+ L ++L  +EE+++RDHRKL  E+DLF   ++ GS
Sbjct: 234 AAYWRGDQRNASLQRIYGTAWESQEALDRHLELIEEAQRRDHRKLGVELDLFSFPDEIGS 293

Query: 264 GVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMF--- 319
           G+  +H KG  + + L  Y RRK  +  Y+ +N+P +    L+  SGH D Y   MF   
Sbjct: 294 GLAVFHPKGGIVRRELEDYSRRKHTEAGYQFVNSPHITKAQLFHTSGHLDWYADGMFPPM 353

Query: 320 ---AVKCADDTI-KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
              A   AD ++ K  + + LKPMNCP H  +F    +SYRELP+RL EFG+VYR E SG
Sbjct: 354 HIDAEHNADGSVRKPGQDYYLKPMNCPMHCLIFRARGRSYRELPLRLFEFGTVYRYEKSG 413

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR-PEKR 434
            +HGL RVRG T DDAH+F T++QM +E   +   I+ +  D+G     ++LST+ P+K 
Sbjct: 414 VVHGLTRVRGLTMDDAHIFSTRDQMRDELRSLLRFILDLLGDYGLTDFYLELSTKDPDKF 473

Query: 435 VGSDALWDDAENIMKGV-----LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGR 489
           VGSD +W++A N++  V     LD + +            G  AFYGPK    +KDA+GR
Sbjct: 474 VGSDEVWEEATNVLAEVGAESGLDLVPDP-----------GGAAFYGPKISVQVKDALGR 522

Query: 490 DWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW 549
            WQ  TIQ+DFN P RF   Y  +   +  PVMIHRA+FGSIERF GI+ E++ G  P W
Sbjct: 523 TWQMSTIQLDFNFPERFELDYTAADGTRQRPVMIHRALFGSIERFFGILTEHYAGAFPAW 582

Query: 550 LSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIIC 609
           L+P+Q +   +    V Y +E+A  LKS+ + +E D  ++ +  KI  H+ +K+P +++ 
Sbjct: 583 LAPVQVVGIPVADEHVPYLEEVAAQLKSYGVRVEVDGSDDRMAKKIVHHTNQKVPFMLLA 642

Query: 610 GDKEASERSIGIRRFGSTT 628
           GD++    ++   RFG  T
Sbjct: 643 GDRDVQAGAVSF-RFGDRT 660


>gi|23465302|ref|NP_695905.1| threonyl-tRNA synthetase [Bifidobacterium longum NCC2705]
 gi|227547263|ref|ZP_03977312.1| threonyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
           ATCC 55813]
 gi|317483234|ref|ZP_07942229.1| threonyl-tRNA synthetase [Bifidobacterium sp. 12_1_47BFAA]
 gi|73919773|sp|Q8G6C2|SYT_BIFLO RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|23325940|gb|AAN24541.1| threonyl-tRNA synthetase [Bifidobacterium longum NCC2705]
 gi|227212222|gb|EEI80118.1| threonyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
           ATCC 55813]
 gi|316915303|gb|EFV36730.1| threonyl-tRNA synthetase [Bifidobacterium sp. 12_1_47BFAA]
          Length = 677

 Score =  463 bits (1191), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 253/639 (39%), Positives = 372/639 (58%), Gaps = 51/639 (7%)

Query: 36  KKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           K  +AV ING+  DL  P+ +G +++ I  +    LA++RHS  H+MA+AVQ ++P  ++
Sbjct: 31  KNIIAVKINGENRDLYTPLNDGDTVDPIALDSEDGLAIMRHSATHVMAQAVQEVYPNAKL 90

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            +GP+I+DGFYYDF  +QPF+ ++L  IEK+MQ II     F ++ ++ E+A  L E   
Sbjct: 91  GVGPVIKDGFYYDFQVDQPFTPNDLKDIEKRMQRIIKSSQSFRRRSVTEEEA--LKEEAD 148

Query: 155 EAYKVEILESIPA-----------KENVTLY----RQGE--WFDLCRGPHVRSTGQVKKF 197
           + +K+E++E   A           ++ ++ Y    R G   W DLCRGPH+ +T  +K F
Sbjct: 149 QPFKIELIEDKEAHLDPAAATEISEKELSFYDNVDRDGNVVWKDLCRGPHLPNTRYIKAF 208

Query: 198 FKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFH 257
            K+ + A AYWRG    P + R+YGTAW T+++L  Y   LEE+ KRDHRKL  EMDLF 
Sbjct: 209 -KIERSAAAYWRGSEKNPTMQRVYGTAWATKEDLKAYQTRLEEAAKRDHRKLGAEMDLFS 267

Query: 258 IAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYR 315
             ++ G G+  +H KG  +   +  Y R    K  Y  + TP +    L++ SGH   Y+
Sbjct: 268 FPDEIGPGLAVFHPKGAAVINAMEDYSREMHRKHHYSFVQTPHITKGGLYETSGHLHWYK 327

Query: 316 ANMFAV------KCADDTI-KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV 368
             M+        K AD  I K    + LKPMNCP H  +F    +SYRELP+RL EFG+V
Sbjct: 328 DGMYPPMHLDEEKDADGNITKPGADYYLKPMNCPMHNLIFKSRQRSYRELPLRLFEFGTV 387

Query: 369 YRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLS 428
           YR E SG +HGL RVRG TQDD+H++CT+EQM +E   +   ++++ KDFG     ++LS
Sbjct: 388 YRYEKSGEVHGLTRVRGLTQDDSHIYCTREQMKDELTSLLTFVLNLLKDFGLTDFYLELS 447

Query: 429 TR-PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAI 487
           T+ P K VGSD +W++A N +  V    K S+ + ++        AFYGPK     +DAI
Sbjct: 448 TKDPNKYVGSDEIWEEATNTLAEV---AKESNLELVDDPC---GAAFYGPKISVQARDAI 501

Query: 488 GRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           GR WQ  TIQ+DFNLP RF   Y+        PVMIHRA+FGSIERF  +++E++ G  P
Sbjct: 502 GRTWQVSTIQLDFNLPERFQLEYIAKDGTHQRPVMIHRALFGSIERFFAVLLEHYAGAFP 561

Query: 548 LWLSPIQAIVTTITSSAVEYAQEIANLLKS---HHLSIETDFRNETINYKIREHSIKKIP 604
            WL+P+Q +   +   A E+A  +A  +KS     +  E D+ ++    KIR  S  K+P
Sbjct: 562 AWLAPVQVLGVPV---ADEFAPHLAGFVKSLEDEMVRCEIDYSDDRFGKKIRNASKSKVP 618

Query: 605 IIIICGDKEASERSIGIR-RFGSTTTQKVSLLDAIPILT 642
            I+I G+++ +  ++  R R GS        L+ +P+ T
Sbjct: 619 FILIVGEEDMNNNAVSFRFRDGSQ-------LNGVPVDT 650


>gi|121612820|ref|YP_999926.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|166223331|sp|A1VXT5|SYT_CAMJJ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|87250382|gb|EAQ73340.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           81-176]
          Length = 602

 Score =  463 bits (1191), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 247/617 (40%), Positives = 377/617 (61%), Gaps = 24/617 (3%)

Query: 34  LAKKAVAVAINGKVCDLSDPVREGSI-EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEV 92
           + K+ +A   N  + D S  V+  ++ EI       SL VIRHSCAH+MA+A++S++PE 
Sbjct: 1   MEKEVIAYLDNETIID-SQSVKNTNLKEIYFDNSKESLEVIRHSCAHLMAQAIKSLYPEA 59

Query: 93  QVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFES 152
           +  +GP+IEDGFYYDF  E     ++L +IEKKM+E+        K  ++  +A   F++
Sbjct: 60  KFFVGPVIEDGFYYDFRVESKIGEEDLVKIEKKMKELAEAKIEISKYEITKSEALAKFQN 119

Query: 153 KKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDS 212
             +  K E+L  IP    V++Y+QGE+ DLCRGPH  +T +  +FFKL +VAGAY  GD 
Sbjct: 120 --DDLKQEVLLRIPDG-AVSIYKQGEFEDLCRGPHAPNT-KFLRFFKLTRVAGAYLGGDE 175

Query: 213 NRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRK 271
            R ML+RIYGTA+  ++ L +YL  +EE++KRDHRKL  E+ LF   ++ G G+  W   
Sbjct: 176 KREMLTRIYGTAFADKESLKEYLTIIEEAKKRDHRKLGTELKLFTFDDEIGGGLPIWLSN 235

Query: 272 GWKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
           G ++ ++ + +M  KI     YE +  P++L    W+ SGH+ +Y+ NM+  +       
Sbjct: 236 GARL-RSKLEHMLYKIHRLRGYEPVRGPELLKADAWKISGHYANYKENMYFTQI------ 288

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
           D + + +KPMNC GH+ ++   ++SYR+LP++  E+G V+R+E SG LHGL RVR FTQD
Sbjct: 289 DEQEYGIKPMNCVGHIKIYQSDVRSYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFTQD 348

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMK 449
           DAH+FC   Q+  + L+I   + ++ K F F   M ++ST+PEK +G D +W+ A   +K
Sbjct: 349 DAHIFCMPSQIKEQVLEILAFVDNLMKLFDFSYEM-EISTKPEKAIGDDEIWEIATKALK 407

Query: 450 GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAF 509
             L+      +  +  G+  G GAFYGPK +  + DA+ R WQCGT+QVDFNLPSRF   
Sbjct: 408 EALN------EQGLKYGIDEGGGAFYGPKIDIKITDALKRKWQCGTVQVDFNLPSRFKLE 461

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQ 569
           Y +S +EK  PVM+HRA+ GS ERFIGI+ E+  G  P +++P    +  I  + + YA+
Sbjct: 462 YTDSDNEKKQPVMLHRAILGSFERFIGILTEHCAGEFPFFIAPTAVGIVPIGEAHIAYAK 521

Query: 570 EIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           EI   L   ++  E   +NE+++ KIR    +K+P+I++ GD E  +RS+ +R   +   
Sbjct: 522 EIQKELLELNIDSEVYEKNESLSKKIRIAEKQKLPMILVLGDDEVVKRSVALRDRRAKEQ 581

Query: 630 QKVSLLDAIPILTKESL 646
           + +S LD    L KE +
Sbjct: 582 KNLS-LDEFIKLVKEKM 597


>gi|28572657|ref|NP_789437.1| threonyl-tRNA synthetase [Tropheryma whipplei TW08/27]
 gi|73919841|sp|Q83HM3|SYT_TROW8 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|28410789|emb|CAD67175.1| threonyl-tRNA synthetase [Tropheryma whipplei TW08/27]
          Length = 640

 Score =  463 bits (1191), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 234/597 (39%), Positives = 360/597 (60%), Gaps = 23/597 (3%)

Query: 39  VAVAINGKVCDLSDPVREGSI-EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIG 97
           VA+  + ++ DLS+ +  G + E I  + PR L ++RHSCAH++A+AVQSI+ + ++ IG
Sbjct: 14  VAMICDDRLLDLSESIPSGKVPEPIELDSPRGLDILRHSCAHVLAQAVQSIYGDAKLGIG 73

Query: 98  PIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAY 157
           P  E+GFYYDF   +PFSSD L  IE KM+EI+  D  F+++ +  + A   F  + E +
Sbjct: 74  PFTENGFYYDFSVNEPFSSDSLRVIEDKMREIVHSDQKFVRKVVDRQSAHSQF--RDEPF 131

Query: 158 KVEILESIPAKENVTLYRQGE-------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRG 210
           K+EI+ +    + +++Y   +       W D CRGPH+ ST  +   F L  V+  YWRG
Sbjct: 132 KLEIINA--TDDTLSIYYNIDADSGSVRWMDFCRGPHLPSTRFIGDAFALTHVSSVYWRG 189

Query: 211 DSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWH 269
           +S+ P + R+YGTAW + ++L  YL  +E ++  DHRKL +E+DLF + ++ G G+  +H
Sbjct: 190 NSDNPQMQRVYGTAWGSAKDLKGYLDRVELAKLVDHRKLGKELDLFSLPDEIGPGLALFH 249

Query: 270 RKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA-VKCADDT 327
            KG  I   +  Y R R +++ Y  + +P +  + L+++SGH   Y  +MF  ++   D+
Sbjct: 250 VKGGIIRSEMEQYARLRHLEEGYNFVYSPHITKRDLFERSGHLQWYGQSMFPPMRLDKDS 309

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
                 + LKPMNCP H  VF+   +SYR+LP+RLAEFG+VYR E SG++HGL RVRG T
Sbjct: 310 CSQGFDYYLKPMNCPFHSLVFSSQPRSYRQLPLRLAEFGTVYRYEQSGAIHGLARVRGLT 369

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE--KRVGSDALWDDAE 445
           QDDAH++ T+E   +E  K     IS+  D+G ++  +++STR    K +GSD  W  A 
Sbjct: 370 QDDAHIYATRESFEDEVSKALQFTISLLGDYGLDQFYIEISTRDASGKFLGSDEDWAYAT 429

Query: 446 NIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSR 505
           +I++ V       ++D        G  AFYGPK     KDAIGR WQ  TIQ+DFNLP R
Sbjct: 430 HILQKVAQDSGLQTRDDP------GGAAFYGPKISVQAKDAIGRYWQMSTIQLDFNLPER 483

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAV 565
           F  FY +   E+  P+M+HRA+FGS ERF  ++ E++ G  P WLSP Q +   +TS+ +
Sbjct: 484 FGLFYTDRAGERKRPIMVHRALFGSFERFFAVLTEHYAGAFPPWLSPEQVVALPVTSAHI 543

Query: 566 EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
            Y +E  +   S  +    D+  + +  KIR +  +KIP +++ GD++ + R++ IR
Sbjct: 544 PYLEEFVSRFSSRLIRARVDYMQDRLPKKIRSYVKEKIPFVLVAGDRDLTNRTVAIR 600


>gi|317495533|ref|ZP_07953901.1| threonyl-tRNA synthetase [Gemella moribillum M424]
 gi|316914347|gb|EFV35825.1| threonyl-tRNA synthetase [Gemella moribillum M424]
          Length = 647

 Score =  462 bits (1190), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 246/650 (37%), Positives = 393/650 (60%), Gaps = 26/650 (4%)

Query: 6   KLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITP 64
           KL FPDG+++ +  + T  ++AESIS SL KK ++  ++    +L+ P+ ++G +++I  
Sbjct: 3   KLVFPDGNVREYD-NKTALEIAESISISLKKKVISAKLDEDYIELNKPITKDGHLKLIVA 61

Query: 65  --EDPRSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
             ED  SL V+RHS AH++A+A++ ++  +V   +GP I+ GFYYDFD E   S ++   
Sbjct: 62  DDEDQDSLYVLRHSSAHLLAQALRRLYGKDVHFGVGPAIDGGFYYDFDSEYKISEEDFKN 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK+M++II+ +     + +S  +A E+F +  + YKVE++  +P  E +T+Y QG++ D
Sbjct: 122 IEKEMKKIISENVAIEGREVSRTEALEIFAA--DPYKVELINDLPEDEVITVYTQGDFVD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG HV ST ++K+F KL+ VAGAYWRG+S+  ML RIYGTA+ T++ L Q+L  L+E+
Sbjct: 180 LCRGGHVASTSKIKEF-KLLSVAGAYWRGNSDNKMLQRIYGTAYFTKEHLEQHLVRLQEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
            +RDHRKL +E+ +F  ++  G+G+  W   G  I +T+  Y+  ++++  Y+ + TP +
Sbjct: 239 RERDHRKLGKELGIFTTSQKVGAGLPLWLPNGATIRRTIERYIVDKEVELGYDHVYTPVL 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             + L+  SGHW+ Y+ +MF     D       T  L+PMNCP H+ V+ +   SYRELP
Sbjct: 299 GSKDLYITSGHWEHYQEDMFPPMEMDH-----ETMVLRPMNCPHHMMVYKNERHSYRELP 353

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG++ GL RVRG T +DAH+F   +Q+ +E      LI   YKD G
Sbjct: 354 IRIAELGMMHRYESSGAVSGLQRVRGMTLNDAHIFVRPDQLKDEFKLTVGLIEEAYKDLG 413

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R     EK    D +W++A+ ++K   D +     D +      GE AFY
Sbjct: 414 ITNFSYRLSYRDPENTEKYFDDDVMWNNAQQMLKETADEL---GLDYVEAE---GEAAFY 467

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  ++ AIG+     TIQ+DF LP RF   Y+    +   PV+IHR +  ++ER +
Sbjct: 468 GPKLDVQVETAIGKQETLSTIQLDFLLPERFELEYIGEDGKAHRPVVIHRGIVSTMERMV 527

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             ++E +KG+LP WL+P Q  +  + +    +Y++EI   LK   + +  D R+E + YK
Sbjct: 528 AFLLEEYKGDLPTWLAPNQVRIIPVNNDYHYDYSKEIMQELKKAGVKVAIDDRDEKLGYK 587

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IRE + KKIP  ++ GDKE   + + +R FGS   ++ S ++    + KE
Sbjct: 588 IREAANKKIPYTLVIGDKEVENKGVNVRTFGSHDQKEESFVEFKENILKE 637


>gi|254444928|ref|ZP_05058404.1| threonyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235]
 gi|198259236|gb|EDY83544.1| threonyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235]
          Length = 610

 Score =  462 bits (1190), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 239/578 (41%), Positives = 353/578 (61%), Gaps = 32/578 (5%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           L  IRHS +H++A AV  ++P+ ++ IGP  + GFYYDFD E  F++D+L +IE +M+++
Sbjct: 8   LEEIRHSSSHVLATAVLRLFPDAKLDIGPPTDTGFYYDFDLEHKFTADDLEKIEAEMKKV 67

Query: 130 IARDSPFLKQYLSHEKARELF-ESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           I  +  F +  +S E+A ++  +  +  YK+  L  IP  E V+ YR GE+ DLC G HV
Sbjct: 68  IKENQRFERIEVSREEAVKMITDFGQTEYKLGRLADIPEGEQVSFYRNGEFLDLCAGSHV 127

Query: 189 RSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRK 248
             T ++K F KL+ +AGAY RGD N   L RIYGTA+ ++ EL  Y+  +EES KRDHR+
Sbjct: 128 NYTKKIKAF-KLLSIAGAYHRGDENNKQLQRIYGTAFPSKAELETYIEQIEESRKRDHRR 186

Query: 249 LAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQ 306
           + +EM LFHI E  G G+I W  KG  I Q L  ++  ++ K +Y ++ TP +    L++
Sbjct: 187 VGKEMGLFHIDEAVGQGLILWKPKGAVIRQELQDFISEQLLKQEYTQVFTPHIGKLGLYK 246

Query: 307 QSGHWDSYRANMFAVKCADDTIKDL-------------------RTFALKPMNCPGHVAV 347
            SGH+  Y+ + F      D++ DL                     + LKPMNCP H+ +
Sbjct: 247 TSGHFPYYQESQFPPLIERDSLADLADENATCSTLTNQLETGDIEGYLLKPMNCPMHIKI 306

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
           ++    SYR+LPVRLAEFG+VYR E SG L+G+ RVRGFTQDDAH+FCT+EQ+  E    
Sbjct: 307 YDSEPHSYRDLPVRLAEFGTVYRWEQSGELNGMTRVRGFTQDDAHIFCTEEQLQGEIQGC 366

Query: 408 HNLIISIYKDFGFEKIMVKLSTR-PE--KRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            +L+  ++   G E   V++S R PE  K VG  A WD AE  ++  + T+     +   
Sbjct: 367 LDLVKIVFGTLGMEDYSVRVSLRDPESDKYVGDPANWDKAEAAIREAVKTLDVPYVEE-- 424

Query: 465 TGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIH 524
                GE AFYGPK ++++KD IGR+WQ GT+QVD+NLP RF+  Y  S ++   PVM+H
Sbjct: 425 ----EGEAAFYGPKIDFVVKDVIGREWQLGTVQVDYNLPVRFDINYTGSDNKPHRPVMVH 480

Query: 525 RAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIET 584
           RA FGS+ERF G++IE+F G+ P WL+P Q  +  I+    +YAQ + + LK++ +    
Sbjct: 481 RAPFGSMERFCGLLIEHFGGDFPTWLAPEQVRILPISDKVADYAQSLLDQLKANGVRATA 540

Query: 585 DFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           DF ++ +  KIR   + K+P  +I G++EA E  + +R
Sbjct: 541 DFNSDKLGAKIRNAELDKVPNTLIVGEREAEENKVSVR 578


>gi|329768866|ref|ZP_08260294.1| threonyl-tRNA synthetase [Gemella sanguinis M325]
 gi|328837229|gb|EGF86866.1| threonyl-tRNA synthetase [Gemella sanguinis M325]
          Length = 647

 Score =  462 bits (1190), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 246/650 (37%), Positives = 394/650 (60%), Gaps = 26/650 (4%)

Query: 6   KLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITP 64
           KL FPDG+++ +  + T  ++AESIS SL KK ++  ++    +++ P+ R+G +++I  
Sbjct: 3   KLVFPDGNVREYD-NKTPLEIAESISVSLKKKVISAKLDDDYIEVNKPITRDGHLKLIVA 61

Query: 65  --EDPRSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
             ED  SL V+RHS AH++A+A++ ++  +V   +GP I+ GFYYDFD E   + ++   
Sbjct: 62  DDEDQDSLYVLRHSSAHLLAQALRRLYGKDVHFGVGPAIDGGFYYDFDSEYKVTEEDFKN 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK+M++I++ +     + +S  +A E+F    + YKVE++  +P  E +T+Y QG++ D
Sbjct: 122 IEKEMKKIVSENIAIEGREVSRSEALEIFAD--DPYKVELINDLPEDEVITVYTQGDFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG HV ST ++K+F KL+ VAGAYWRG+S+  ML RIYGTA+ T+  L Q+L+ L+E+
Sbjct: 180 LCRGGHVASTSKIKEF-KLLSVAGAYWRGNSDNKMLQRIYGTAYFTKDHLQQHLHRLQEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
            +RDHRKL +E+ +F  ++  G+G+  W   G  I +T+  Y+  ++++  Y+ + TP +
Sbjct: 239 RERDHRKLGKELGIFTTSQKVGAGLPLWLPNGATIRRTIERYIVDKEVELGYDHVYTPIM 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             + L+  SGHWD Y+ +MF     D       T  L+PMNCP H+ V+ +   SYRELP
Sbjct: 299 GSKDLYITSGHWDHYQEDMFPPMEMDH-----ETMVLRPMNCPHHMMVYKNERHSYRELP 353

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG++ GL RVRG T +DAHVF   +Q+ +E      LI   YKD G
Sbjct: 354 IRIAELGMMHRYEASGAVSGLQRVRGMTLNDAHVFVRPDQLKDEFKLTVGLIQEAYKDLG 413

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
            +    +LS R     EK    D +W++A+ ++K   D +     D +      GE AFY
Sbjct: 414 IKNFSYRLSYRDPENTEKYFDDDNMWNNAQQMLKETADEL---GLDYVEAE---GEAAFY 467

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  ++ AIG+     TIQ+DF LP RF   Y+    +   PV+IHR +  ++ER +
Sbjct: 468 GPKLDVQVETAIGKQETLSTIQLDFLLPERFELEYIGEDGKAHRPVVIHRGIVSTMERMV 527

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             ++E +KG+LP WL+P Q  +  + +    +Y++EI   LK   + +  D R+E + YK
Sbjct: 528 AFLLEEYKGDLPTWLAPNQVRIIPVNNDYHYDYSKEIMQELKKAGVKVTIDDRDEKLGYK 587

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IRE + KKIP  ++ GDKE   +++ +R FGS   ++ S ++    + KE
Sbjct: 588 IREAANKKIPYTLVIGDKEVENKAVNVRTFGSHDQKEESFVEFKENILKE 637


>gi|326382111|ref|ZP_08203803.1| threonyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
 gi|326198841|gb|EGD56023.1| threonyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
          Length = 700

 Score =  462 bits (1190), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 254/627 (40%), Positives = 368/627 (58%), Gaps = 44/627 (7%)

Query: 44  NGKVCDLS-DPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIED 102
           +G + DLS  P  +  +E +T +     +VIRHSCAH++A+AVQ + P+  + IGP I D
Sbjct: 55  DGTLRDLSWVPDVDAHVEPVTADSEDGRSVIRHSCAHVLAQAVQELNPQAHLGIGPPITD 114

Query: 103 GFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQ-YLSHEKAR----------ELFE 151
           GFYYDF+   PF+ ++L  +EK+M++II     F ++ Y S + AR          EL +
Sbjct: 115 GFYYDFEVADPFTPEDLKALEKQMKKIIKSGQRFSRRVYESKDAARDELANEPFKLELID 174

Query: 152 SKKEAYKVEILE----SIPAKENVTLYRQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAG 205
            K  A   EI+E     + A +N+   R GE  W DLCRGPHV +T  +  F KL + + 
Sbjct: 175 DKGAADDAEIMEVGGAELTAYDNLNP-RTGERVWGDLCRGPHVPTTKYIAAF-KLTRSSA 232

Query: 206 AYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSG 264
           AYWRGD +   L R+YGTAW + + +  YL  L E+EKRDHR+L  E+DLF   ++ GSG
Sbjct: 233 AYWRGDQSLADLQRVYGTAWESTEAMDAYLDRLAEAEKRDHRRLGAELDLFSFPDELGSG 292

Query: 265 VIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMF---- 319
           +  +H KG  I + +  Y R +     YE +NTP +    L++ SGH D Y   MF    
Sbjct: 293 LPVFHPKGGIIRKEMEDYSREQHAAGGYEFVNTPHLTKSTLFEVSGHLDWYADGMFPPMH 352

Query: 320 --AVKCADDTI-KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
             A    D T+ K  + + +KPMNCP H  +F    +SYRELP+RL EFGSVYR E SG 
Sbjct: 353 LDAEYNEDGTLRKPGQDYYVKPMNCPMHNLIFGSRGRSYRELPLRLFEFGSVYRYEKSGV 412

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR-PEKRV 435
           +HGL R RGFTQDDAH++CT+EQ+  E     N ++ + KD+G +   ++LST+ P K V
Sbjct: 413 VHGLTRARGFTQDDAHIYCTQEQVVEELTTTLNFVLQLLKDYGLDDFYLELSTKDPAKYV 472

Query: 436 GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL---GEGA-FYGPKFEYILKDAIGRDW 491
           GSD +WD+A   ++ V ++          +G+ L    EGA FYGPK    +KDA+GR W
Sbjct: 473 GSDEVWDEATETLRQVGES----------SGLELVPDPEGAAFYGPKISVQVKDALGRTW 522

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLS 551
           Q  TIQ+DFNLP RF   Y  +   K  PVMIHRA+FGSIERF G++ E++ G  P+WLS
Sbjct: 523 QMSTIQLDFNLPERFQLEYTATDGTKKRPVMIHRALFGSIERFFGVLTEHYAGAFPVWLS 582

Query: 552 PIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
           P+Q +   +  +  ++ Q + + LK   +  E DF ++ +  KIR H+  K+P +++ G+
Sbjct: 583 PVQVVGIPVAEAFADHLQNVVSRLKGRRVRAEVDFSDDRMQKKIRNHTTAKVPFMLLAGE 642

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAI 638
           ++    ++  R    T    V + +AI
Sbjct: 643 RDVQANAVSFRFRDGTQLNGVPVDEAI 669


>gi|260940036|ref|XP_002614318.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
 gi|238852212|gb|EEQ41676.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
          Length = 722

 Score =  462 bits (1190), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 249/634 (39%), Positives = 372/634 (58%), Gaps = 28/634 (4%)

Query: 2   PSD-IKLTFPDGSIKNFPVHATGS-DVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGS 58
           P D IK+T  DGS+K    + T   D+A SI +S A++ V   ++G++ DL  P+  +  
Sbjct: 67  PRDAIKITLKDGSVKEGTAYETSPWDIASSIGKSFAERQVISKVDGELWDLERPLEGDAV 126

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF---DKEQPFS 115
           +E +  E P   AV  HS AH++ EA +  +    ++ GP  EDGF+YD    D E   S
Sbjct: 127 LEFLDFEHPEGKAVFWHSSAHVLGEACECHYG-CHLSYGPPTEDGFFYDMSINDGEGVVS 185

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLY 174
            D+   IEK   +II     F++  ++ E+  ++FE  K  YKV+ + E +P   + T+Y
Sbjct: 186 QDDFGTIEKVSTKIIKEKQKFVRLEMTKEELLKMFEYNK--YKVKFISEKVPDGTSTTVY 243

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
           R G   DLCRGPH+  TG++K F K++K + +Y+ GDSN   L R+YG ++  ++ + ++
Sbjct: 244 RCGPLIDLCRGPHILHTGKIKAF-KVLKNSSSYFLGDSNNDSLQRVYGISFPDKKLMDEH 302

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEE 293
           L FL+E+ +RDHRK+ +E +LF+  E   G  FW   G +I+ TL+  +R + +   YEE
Sbjct: 303 LKFLKEASERDHRKIGKEQELFYFNEVSPGSAFWLPHGTRIYNTLVDMLREEYRQRGYEE 362

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           + TP + +  LW+ SGHW +Y+ NMF+ +   DT      F LKPMNCPGH  +F    +
Sbjct: 363 VITPNMYNTKLWEISGHWGNYKENMFSFEVEKDT------FGLKPMNCPGHCVLFKSRER 416

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYRELP R+A+FG V+RNE SG+L GL RVR F QDDAH+FC ++Q+  E   + + +  
Sbjct: 417 SYRELPWRVADFGVVHRNEFSGALSGLTRVRRFQQDDAHIFCEQDQIEQEIAGVFDFLQK 476

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           +Y  FGFE   ++LSTRPEK VG    W+ AE  ++  L+      +  +N     G+GA
Sbjct: 477 VYGTFGFE-FKMELSTRPEKYVGDLETWNGAEKNLENALNKFMGEGKWELNP----GDGA 531

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK----CHPVMIHRAVFG 529
           FYGPK +  + DA+ R +QC TIQ+DF +P RF   Y    + K      PVMIHRA+ G
Sbjct: 532 FYGPKIDIKISDALRRWFQCATIQLDFQMPQRFELEYKRDSNSKENSMARPVMIHRAILG 591

Query: 530 SIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIAN-LLKSHHLSIETDFRN 588
           S+ER   I+ E++KG  P WLSP Q +V  +     EYA+++ + L+K H    + D   
Sbjct: 592 SVERMTAILTEHYKGKWPFWLSPRQILVVPVGVKYFEYAEQLKDELVKKHKFYADVDLSG 651

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
            T+  K+R   + K   I I G++E +E S+ IR
Sbjct: 652 NTLQKKVRNGQMLKYNFIFIVGEQEQAEHSVNIR 685


>gi|284929344|ref|YP_003421866.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [cyanobacterium
           UCYN-A]
 gi|284809788|gb|ADB95485.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [cyanobacterium
           UCYN-A]
          Length = 608

 Score =  462 bits (1190), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 247/603 (40%), Positives = 366/603 (60%), Gaps = 22/603 (3%)

Query: 46  KVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY 105
           K   L++   +  I+++   +   L  IRH+ +H+MA AVQ ++P+ +V IGP  E GFY
Sbjct: 3   KKSTLTEVSEQQDIKLLRTSESHKLKCIRHTASHVMAMAVQRLFPQAKVTIGPWTETGFY 62

Query: 106 YDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESI 165
           YDFD  +PF   +L  I+K+M +II    P +K+ ++ E+A++     +E YK+EILE++
Sbjct: 63  YDFDISKPFLDQDLKNIKKEMIKIIKSKLPVIKEEITLEEAKKRIAQIQEPYKLEILENL 122

Query: 166 PAKENVTLYRQG-EWFDLCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
             +  +TLY  G EW+DLC GPH+ ST  +  K F++  VAGAYWRGD  +  L RIYGT
Sbjct: 123 --QPPITLYHLGSEWWDLCSGPHLESTANLHPKAFEIESVAGAYWRGDETKAQLQRIYGT 180

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISY 282
           AW T  +L +Y    EE+ KRDHRKL +E+ LF  +   G G+  W  KG  I   L ++
Sbjct: 181 AWETPAQLVEYKKRKEEALKRDHRKLGKELGLFIFSNSVGPGLPLWTPKGTIIRSVLENF 240

Query: 283 MRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT-FALKPMN 340
           +R  ++K  Y  + TP +    L++ SGHW +Y+ +MF +   ++  +     F LKPMN
Sbjct: 241 LREEQLKRGYLPVVTPHIGKVDLFKTSGHWQNYKEDMFPLMSDNEVARGEEIGFVLKPMN 300

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
           CP H+ ++   LKSYR+LPVRLAEFG+VYR E SG L GL RVRGFT DD+H+F T +Q+
Sbjct: 301 CPFHIQIYKSDLKSYRDLPVRLAEFGTVYRYEKSGELGGLTRVRGFTVDDSHLFVTPDQL 360

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTR---PEKRVGSDALWDDAENIMKGVLDTIKN 457
            +E L + NLI+S++++   +    +LS R     K +GSD +W+ ++N    +   +K 
Sbjct: 361 DDEFLNVVNLILSVFENLQLKNFKARLSFRDPSSNKYIGSDEVWEKSQN---AIYRAVKM 417

Query: 458 SSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK 517
            + D        GE AFYGPK ++I +DA+ R+WQ GT+QVD+NLP RFN  Y+    +K
Sbjct: 418 LNIDYFEAE---GEAAFYGPKLDFIFQDALDREWQLGTVQVDYNLPERFNLEYIGEKGDK 474

Query: 518 CHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKS 577
             P+MIHRA FGS+ER IGI+IE + G+ PLWLSP+Q  +  ++   ++YA+ +   +  
Sbjct: 475 HRPIMIHRAPFGSLERLIGILIEEYVGDFPLWLSPVQVRILPVSDLYLDYAKGVMQTMLM 534

Query: 578 HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
             +  E D   E +   IR+   +KIP++ I G KE    S+ IR      T+K   L  
Sbjct: 535 SKIRAEVDTSGERLGKMIRKGEKEKIPVMAIIGSKEMETNSLNIR------TRKSGELGL 588

Query: 638 IPI 640
           +PI
Sbjct: 589 MPI 591


>gi|255323684|ref|ZP_05364814.1| threonyl-tRNA synthetase [Campylobacter showae RM3277]
 gi|255299398|gb|EET78685.1| threonyl-tRNA synthetase [Campylobacter showae RM3277]
          Length = 606

 Score =  462 bits (1190), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 246/615 (40%), Positives = 377/615 (61%), Gaps = 25/615 (4%)

Query: 39  VAVAINGKVCDL-SDPVREGSIEIITPED-PRSLAVIRHSCAHIMAEAVQSIWPEVQVAI 96
           +A  ++G + D  S   RE + E I  ++ P +L VIRHSCAH+MA+A++ ++P+ +  +
Sbjct: 5   IAYKLDGNIVDTQSINGRENAAEPIYFDNSPDALNVIRHSCAHLMAQAIKELYPQAKFFV 64

Query: 97  GPIIEDGFYYDF---DKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESK 153
           GP +EDGFYYDF   D     S ++LA IE KM+E+       +K   S  KA    + K
Sbjct: 65  GPNVEDGFYYDFKVDDANSKLSDEDLAAIEAKMKELAEAKLDIVKA--SSTKAFMSDKFK 122

Query: 154 KEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSN 213
            +  K E+L+ IP  E V+ Y+QG + DLCRGPH+ +T +  KFFKL +VAGAY  GD  
Sbjct: 123 DDELKQEVLKRIPEGE-VSSYKQGNFEDLCRGPHLPNT-KFLKFFKLTRVAGAYLGGDET 180

Query: 214 RPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKG 272
           R M++RIYGTA+  ++ L +++  +EE++KRDHRKL  EM LF   ++ G G+  W   G
Sbjct: 181 REMINRIYGTAFADKESLKEHIRIIEEAKKRDHRKLGVEMKLFTFDDEVGGGLPIWLPNG 240

Query: 273 WKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
            ++   L   + +  +D  YE +  P++L   +W++SGH+ +Y+ NM+       T  D 
Sbjct: 241 GRLRSKLEQILYKAHRDRGYEPVRGPELLKADVWKKSGHYANYKENMYF------TTIDE 294

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
             + +KPMNC GH+ V+   ++SYR+LP++  E+G V+R+E SG LHGL RVR F QDD+
Sbjct: 295 AEYGIKPMNCVGHIKVYQSDIRSYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFAQDDS 354

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
           H+FC   Q+    L+I      I ++FGF   M ++ST+P K +G D +W+ A   +K  
Sbjct: 355 HIFCMPSQIKENILEILKFAGKIMENFGFHYEM-EISTKPAKAIGGDEIWETATKALKEA 413

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
           LD      ++    G+  G GAFYGPK +  + DA+ R WQCGTIQVDFNLP RF+  Y+
Sbjct: 414 LD------ENGFKYGIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDFNLPERFDLGYI 467

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
           ++++E+  PVM+HRA+ GS ERFIGI+IE+  G LP +++P Q ++  I+ + ++YA+ +
Sbjct: 468 DANNERQQPVMLHRALLGSFERFIGILIEHTGGELPFFVAPTQVVIVPISDAHLDYAKTV 527

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
           A  L+   +  E   +NE++N +IR    +++P+I + GD E +  +I +R   +T  QK
Sbjct: 528 AKELRKIGVDSEIASKNESLNKRIRTAEKQRVPMIAVLGDNEVANSAIALRD-RTTREQK 586

Query: 632 VSLLDAIPILTKESL 646
              LD    L K  L
Sbjct: 587 DMKLDEFVGLLKSKL 601


>gi|222528807|ref|YP_002572689.1| threonyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
 gi|222455654|gb|ACM59916.1| threonyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
          Length = 647

 Score =  462 bits (1189), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 247/627 (39%), Positives = 377/627 (60%), Gaps = 21/627 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I +T PDG +       +G +  ++IS  L K+AVA  I+G + DL   + R+ S E++T
Sbjct: 4   IAVTLPDGKVLEAEKGISGMEFIKTISMRLYKEAVACKIDGVLKDLWTSLERDCSFEVVT 63

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
                   V  H+ +HI+A+AV+ ++ + V++ IGP I++GFYYDFD E+  + + L +I
Sbjct: 64  FSSDEGKKVYWHTTSHILAQAVKRLFGDKVKLGIGPAIDNGFYYDFDIEESITREILEKI 123

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E++MQ+II  D    +  LS E+A +L + + E YKVE++  IP  E ++ YRQGE+ DL
Sbjct: 124 EEEMQKIIKEDLKIERFELSREEAIKLMQQRGENYKVELINDIPEGEIISFYRQGEFVDL 183

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPH+ STG+VK F KL+ VAGAYWRG+S   ML RIYG ++  + EL +YL  LEE++
Sbjct: 184 CTGPHLPSTGRVKAF-KLLSVAGAYWRGNSKNKMLQRIYGISFEKKSELDEYLKKLEEAK 242

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVL 300
           KRDH ++ RE+++F  +E  G G+     KG KI Q L  ++   + K  Y    TP + 
Sbjct: 243 KRDHNRIGRELEIFTTSEVVGQGLPLLMPKGAKILQILQRFVEDEEEKRGYLLTKTPYMA 302

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
              L++ SGHWD YR  MF ++  ++ +      AL+PM CP    ++N   +SYR+LP+
Sbjct: 303 KSDLYKISGHWDHYRDGMFVIEEDENEV-----LALRPMTCPFQFLIYNSKQRSYRDLPI 357

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R +E  +++RNE SG +HGL+RVR FT  DAH+ C  +Q+  E   + +LI  I K  G 
Sbjct: 358 RYSETSTLFRNESSGEMHGLIRVRQFTLSDAHIICRPDQVEEEFKGVLDLIQYIMKILGI 417

Query: 421 EK-IMVKLS----TRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           E  I  + S       EK + +   W+  EN MK +LD +       IN     GE AFY
Sbjct: 418 ENDIWYRFSRWDPNNKEKYIDNPEAWEKTENDMKNILDKLG------INYKEAKGEAAFY 471

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +   K+  G++    TIQ+DF L  RF+  YV+   +K  P++IHR+  G  ER +
Sbjct: 472 GPKLDIQFKNVYGKEDTIITIQIDFALAERFDMTYVDRDGQKKRPIIIHRSSIGCYERTL 531

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE + G  PLWL+P+Q  V  ++ +  EYA+ +A +LK +   +E D+R+ET+ YKI
Sbjct: 532 AMLIEKYNGAFPLWLAPVQIRVIPVSDNFNEYAKNVARILKENGFRVEEDYRSETVGYKI 591

Query: 596 REHSIKKIPIIIICGDKEASERSIGIR 622
           R+  ++KIP ++I G+KE  E ++ +R
Sbjct: 592 RDAQLQKIPYMVIVGEKEQKENTVAVR 618


>gi|257068556|ref|YP_003154811.1| threonyl-tRNA synthetase [Brachybacterium faecium DSM 4810]
 gi|256559374|gb|ACU85221.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Brachybacterium
           faecium DSM 4810]
          Length = 666

 Score =  462 bits (1188), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 245/647 (37%), Positives = 375/647 (57%), Gaps = 44/647 (6%)

Query: 11  DGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRS 69
           DGS +      TG++V    +       VA+ I+G++ DL   + EG S+E +    P  
Sbjct: 9   DGSSQQLAEGTTGTEVFAGTA-----TIVALRIDGELRDLDTVLAEGQSVEGVDISSPDG 63

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           L+++RHS AH++A+AVQ   PE ++ IGP I DGFYYDFD  +PF+ + L  +EK+M  I
Sbjct: 64  LSILRHSAAHVLAQAVQKTNPEAKLGIGPPITDGFYYDFDVAEPFTPESLKALEKEMHRI 123

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-------------VTLY-- 174
           I     F+++ +S + AR   E   E YK+E++      E+             +T+Y  
Sbjct: 124 IKSGQRFVRREISDDAARA--EEASEPYKLELIGLKSTAEDAAEGASVEVGEGGLTMYDN 181

Query: 175 --RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQE 230
             ++G+  W DLCRGPH+ +T  +   F L + A AYWRG    PML RIYGTAW T++E
Sbjct: 182 VDKKGQTVWTDLCRGPHLPTTKLIGNGFALTRSAAAYWRGSEKNPMLQRIYGTAWPTKEE 241

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IK 288
           L  +   + E+E+RDHR+L  E+DLF   ++ GSG+  +H KG  +   +  Y RR+ ++
Sbjct: 242 LRAHQERIAEAERRDHRRLGSELDLFSFPDEIGSGLPVFHPKGAMVKMEMEDYSRRRHVE 301

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL-------RTFALKPMNC 341
             Y  +++P +  ++L++ S H + Y   M+     D+   D        + + LKPMNC
Sbjct: 302 AGYSFVSSPHITKKNLFETSRHLEWYAEGMYPPMHVDEERDDEGNITRQGQDYYLKPMNC 361

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
           P H  V+    +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDDAH++ T+EQM 
Sbjct: 362 PMHNLVYRSRGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYTTREQMK 421

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTR-PEKRVGSDALWDDAENIMKGVLDTIKNSSQ 460
            E   +   ++ + +D+G +   ++LSTR PEK VG +  WD+A   ++ V      +++
Sbjct: 422 EELTSLLGFVLDLLRDYGLDDFYLELSTRDPEKSVGDETTWDEATRTLEEV------ATE 475

Query: 461 DRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHP 520
             +      G  AFYGPK     KDAIGR WQ  TIQ+DF  P  F   Y      +  P
Sbjct: 476 SGLELVPDPGGAAFYGPKISVQAKDAIGRTWQLSTIQLDFFEPELFELEYTAPDGSRQRP 535

Query: 521 VMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHL 580
           VMIHRA+FGSIERF G+++E++ G  P+WL+P+Q +   + +  V Y +E+A  L++H +
Sbjct: 536 VMIHRALFGSIERFFGVLLEHYAGAFPVWLAPVQVVGVPVAAEYVPYLEEVAAKLRAHGV 595

Query: 581 SIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR-RFGS 626
            +E D  ++ +  KIR H+ +K+P ++I G ++ +  ++  R R GS
Sbjct: 596 RVEVDSSDDRMQKKIRTHTKEKVPYLLIAGGEDQAHGAVSFRMRDGS 642


>gi|148654295|ref|YP_001274500.1| threonyl-tRNA synthetase [Roseiflexus sp. RS-1]
 gi|148566405|gb|ABQ88550.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Roseiflexus sp.
           RS-1]
          Length = 595

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 233/568 (41%), Positives = 353/568 (62%), Gaps = 30/568 (5%)

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIAR 132
           +RHS AH+MA+AV  I+PE ++AIGP IEDGFYYDFD  +P + D+L +IE++M+ IIA 
Sbjct: 13  LRHSAAHVMAQAVLEIFPEGKIAIGPPIEDGFYYDFDLPRPLTPDDLEEIEQRMRRIIAG 72

Query: 133 DSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-----------VTLYRQGEWFD 181
             PF+ + +  ++AR LF  + + YK+E++E +   ++           ++ Y+   + D
Sbjct: 73  RHPFVYRVVDPDEARALF--RDQPYKLELIEGLLHGQDEYGEQSGSSTVISTYKHDTFED 130

Query: 182 LCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           LCRGPH+  TGQ+    FKLM VAGAYWRGDSNRPML RIYGTAWN+++EL  YL+ LEE
Sbjct: 131 LCRGPHLEHTGQIPPDAFKLMSVAGAYWRGDSNRPMLQRIYGTAWNSKEELDAYLHRLEE 190

Query: 241 SEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           +++RDHR++ +E+ LF+ ++D G G+  +  KG  +   + SY+R  + +  Y+ + T  
Sbjct: 191 AKRRDHRRIGKELGLFYFSDDIGPGLPLFTPKGEMLRHLMESYVREVQTRYGYQHVWTGH 250

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH-GLKSYRE 357
           ++ + L+++SGH+++YR NMF     D+       + LKPMNCP H+ ++   G+ SYR+
Sbjct: 251 IVREALYKKSGHYEAYRENMFPPMVEDEE----HIYRLKPMNCPSHMTLYKEMGIHSYRD 306

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R AEF ++YR E  G+L GL RVR  TQDD H+FC  +Q+  E      LI  + + 
Sbjct: 307 LPLRFAEFATLYRYEDRGTLTGLTRVRALTQDDCHIFCRPDQIEEEFGLALRLIREVLET 366

Query: 418 FGFEKIMVKLSTRPE--KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           + F    V+LS R    K +  D  WD AE+ ++  LD      ++        GE A Y
Sbjct: 367 YRFTDYRVRLSLRGAGGKYITDDEAWDLAEHALRTALDHYGVEYEE------APGEAAIY 420

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +++ +D +GR+WQ  TIQVDF  P R    Y+    +   PV++HRAV GS ERF+
Sbjct: 421 GPKADFLARDVLGREWQLSTIQVDFIQPRRLGLEYIAEDGQPRTPVVLHRAVTGSTERFL 480

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
           G++IE++ G  PLWL+P+QAIV  I+      YA E+   L +  L +E D   + +  K
Sbjct: 481 GVLIEHYAGAFPLWLAPVQAIVIPISDERHSAYAAEVGRQLTAAQLRVEVDLSKDRMQAK 540

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIR 622
           IR+  ++KIP ++I GD+E    ++ +R
Sbjct: 541 IRQAQLQKIPYMLIIGDREQRAGAVAVR 568


>gi|262202217|ref|YP_003273425.1| threonyl-tRNA synthetase [Gordonia bronchialis DSM 43247]
 gi|262085564|gb|ACY21532.1| threonyl-tRNA synthetase [Gordonia bronchialis DSM 43247]
          Length = 691

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 255/677 (37%), Positives = 381/677 (56%), Gaps = 49/677 (7%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVA--INGKVCDLS-DPVREG 57
           MP ++ +T P  +I+       G+ + E    +   +A+ V    +G++ DLS  P  + 
Sbjct: 1   MPDEVMVTSP-ATIRVPAGTTAGTALREHEQPNKGPEAIVVVRDADGELRDLSWAPEHDT 59

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSD 117
            +  +        +VIRHS AH++A+AVQ ++P  ++ IGP I+DGFYYDFD ++PF+ +
Sbjct: 60  DVTPVAANTDAGRSVIRHSAAHVLAQAVQDLFPGTRLGIGPPIKDGFYYDFDVDEPFTPE 119

Query: 118 ELAQIEKKMQEIIARDSPFLKQ-YLSHEKAR----------ELFESKKEAYKVEILE--- 163
           +L+++EKKM++II     F ++ Y S ++AR          EL + K  A   E++E   
Sbjct: 120 DLSKLEKKMRQIIKSGQRFSRRVYASKDEARAELANEPFKLELIDDKGAADDSEVMEVGG 179

Query: 164 -SIPAKENVTLYRQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRI 220
             + A +N+   R GE  W DLCRGPHV +T  +  F KL + + AYWRGD +   L RI
Sbjct: 180 AELTAYDNLNP-RTGERMWCDLCRGPHVPTTKYIAAF-KLTRSSAAYWRGDQDNADLQRI 237

Query: 221 YGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTL 279
           YGTAW + +    YL  L E+EKRDHRKL  E+DLF   ++ GSG+  +H KG  I + L
Sbjct: 238 YGTAWESTEAQDAYLEMLAEAEKRDHRKLGSELDLFSFPDEIGSGLPVFHPKGGVIRKEL 297

Query: 280 ISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT----- 333
             Y R R  +  YE + TP      L+  SGH D Y   M+     D+ +    T     
Sbjct: 298 EDYSRLRHAQAGYEFVYTPHATKGDLFSLSGHLDWYADGMYPPMQLDEEVDADGTVRRPA 357

Query: 334 --FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
             + LKPMNCP H  +F    +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDDA
Sbjct: 358 IDYYLKPMNCPMHNLIFRSRGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDA 417

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR-PEKRVGSDALWDDAENIMKG 450
           H++CT+EQM  E   +   ++ + +D+G +   ++LSTR P+K +GSD  W++A  +++ 
Sbjct: 418 HIYCTREQMGEEVRSLLQFVLDLLRDYGLDDFYLELSTRNPDKSIGSDEAWEEATEVLRA 477

Query: 451 V-----LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSR 505
                 LD + +            G  AFY PK     +DAIGR WQ  TIQVD  LP R
Sbjct: 478 AATSFGLDLVDDP-----------GGAAFYAPKISVQARDAIGRTWQMSTIQVDMMLPDR 526

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAV 565
           F   Y  +   K  PVMIHRA+FGSIERF G++ E++ G  P WLSP+Q +   +  +  
Sbjct: 527 FELEYTGTDGAKHRPVMIHRALFGSIERFFGVLTEHYAGAFPAWLSPVQVVGIPVADAFA 586

Query: 566 EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
           ++ Q + + L++  L  E D  ++ +  KIR H+  K+P +++ G+++    ++  R   
Sbjct: 587 DHLQGVVDTLRAAGLRAEVDHSDDRMQKKIRNHTTGKVPFMLLAGERDVEAGAVSFRFRD 646

Query: 626 STTTQKVSLLDAIPILT 642
            T    V + +A+ I+T
Sbjct: 647 GTQVNGVPVAEAVGIIT 663


>gi|213692035|ref|YP_002322621.1| threonyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
           ATCC 15697]
 gi|254783509|sp|B7GR13|SYT_BIFLI RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|213523496|gb|ACJ52243.1| threonyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
           ATCC 15697]
 gi|320458147|dbj|BAJ68768.1| threonyl-tRNA synthase [Bifidobacterium longum subsp. infantis ATCC
           15697]
          Length = 677

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 248/637 (38%), Positives = 368/637 (57%), Gaps = 51/637 (8%)

Query: 36  KKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           K  +AV ING+  DL  P+ +G ++E IT +    LA++RHS  H+MA+AVQ ++P  ++
Sbjct: 31  KNIIAVKINGENRDLYTPLADGDTVEPITLDSEDGLAIMRHSATHVMAQAVQEVYPNAKL 90

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            +GP+I+DGFYYDF  ++PF+ ++L  IEK++Q II     F ++ ++ E+A  L E   
Sbjct: 91  GVGPVIKDGFYYDFQVDKPFTPEDLKDIEKRIQRIIKSSQSFRRRSVTEEEA--LKEEAD 148

Query: 155 EAYKVEILESIPA-----------KENVTLY----RQGE--WFDLCRGPHVRSTGQVKKF 197
           + +K+E++E   A           ++ ++ Y    R G   W DLCRGPH+ +T  +K F
Sbjct: 149 QPFKIELIEDKEAHLDPAAATEISEKELSFYDNVDRDGNVVWKDLCRGPHLPNTRYIKAF 208

Query: 198 FKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFH 257
            K+ + A AYWRG    P + RIYGTAW T+ +L  Y   LEE+ KRDHRKL  EMDLF 
Sbjct: 209 -KIERSAAAYWRGSEKNPTMQRIYGTAWATKDDLKAYQTRLEEAAKRDHRKLGAEMDLFS 267

Query: 258 IAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYR 315
             ++ G G+  +H KG  +   +  Y R    K  Y  + TP +    L++ SGH   Y+
Sbjct: 268 FPDEIGPGLAVFHPKGAAVINAMEDYSREMHRKHHYSFVQTPHITKGGLYETSGHLHWYK 327

Query: 316 ANMFAVKCAD-------DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV 368
             M+     D       +  K    + LKPMNCP H  +F    +SYRELP+RL EFG+V
Sbjct: 328 DGMYPAMHLDEEYDADGNVTKPGFDYYLKPMNCPMHNLIFKSRQRSYRELPLRLFEFGTV 387

Query: 369 YRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLS 428
           YR E SG +HGL RVRG TQDD+H++CT+EQM +E   +   ++++ KDFG     ++LS
Sbjct: 388 YRYEKSGEVHGLTRVRGLTQDDSHIYCTREQMKDELTSLLTFVLNLLKDFGLSDFYLELS 447

Query: 429 TR-PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAI 487
           T+ P+K VGSD +W++A   ++ V      +    ++     G  AFYGPK     +DAI
Sbjct: 448 TKDPDKYVGSDEIWEEATRTLREV------AEASHLDLVADPGGAAFYGPKISVQARDAI 501

Query: 488 GRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           GR WQ  TIQ+DFNLP RF   Y+        PVMIHRA+FGSIERF  +++E++ G  P
Sbjct: 502 GRTWQVSTIQLDFNLPERFQLEYIAKDGTHQRPVMIHRALFGSIERFFAVLLEHYAGAFP 561

Query: 548 LWLSPIQAIVTTITSSAVEYAQEIANLLKS---HHLSIETDFRNETINYKIREHSIKKIP 604
            WL+P+Q +   +   A E+A  +A  +KS     +  E D+ ++    KIR  S  K+P
Sbjct: 562 AWLAPVQVLGVPV---ADEFAPHLAGFVKSLEDEMVRCEIDYSDDRFGKKIRNASKSKVP 618

Query: 605 IIIICGDKEASERSIGIR-RFGSTTTQKVSLLDAIPI 640
            I+I G+++ +  ++  R R GS        L+ +P+
Sbjct: 619 FILIVGEEDMNNNAVSFRFRDGSQ-------LNGVPV 648


>gi|118475741|ref|YP_892822.1| threonyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40]
 gi|118414967|gb|ABK83387.1| threonyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40]
          Length = 617

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 242/610 (39%), Positives = 367/610 (60%), Gaps = 25/610 (4%)

Query: 32  RSLAKKAVAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE 91
           R++    +A  +N ++ D       G  EI       +L VIRHSCAH+MA A++ ++P 
Sbjct: 10  RNIMSDIIAYKVNEQIVDTQSYCGNGGEEIFFDNSKEALDVIRHSCAHLMAAAIKELYPN 69

Query: 92  VQVAIGPIIEDGFYYDF-----DKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKA 146
            +  +GP IEDGFYYD      D E+   SD L +IEKKM+E+       +K   +  K+
Sbjct: 70  AKFFVGPCIEDGFYYDMRVSKSDGEKLGESD-LEEIEKKMKELALAKIDIVK--FNSTKS 126

Query: 147 RELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGA 206
               +   +  K E+L+ IP    V+LY QG + D+CRGPHV +T    +FFKL ++AGA
Sbjct: 127 EVAAKYASDDLKQEVLKRIPDGV-VSLYSQGNFEDICRGPHVPNT-IFTRFFKLTRIAGA 184

Query: 207 YWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGV 265
           Y  GD NR ML+RIYGTA+  ++ L ++++ +EE++KRDHRKL  EM  F   +  G G+
Sbjct: 185 YLGGDENREMLTRIYGTAYADKESLKEHIHIIEEAKKRDHRKLGAEMKFFTFDDTIGVGL 244

Query: 266 IFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCA 324
             W   G ++   L   + R  +   YE +  P++L    W+ SGH+ +Y+ NM+     
Sbjct: 245 PIWLPNGARLRSRLEHKLYRTHRLRGYEPVRGPEILKSDAWKISGHYANYKENMYF---- 300

Query: 325 DDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVR 384
             T+ D + + +KPMNC GH+ V+   ++SYR+LP++  E+G V+R+E SG LHGL RVR
Sbjct: 301 --TVIDEQEYGIKPMNCVGHIKVYQSEIRSYRDLPLKFFEYGVVHRHEKSGVLHGLFRVR 358

Query: 385 GFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
            FTQDDAH+FC   Q+     +I + + ++   FGF   M ++ST+P K VG DA+W+ A
Sbjct: 359 EFTQDDAHLFCMPSQIKENVYEILSFVDTLMSAFGFTYEM-EISTKPAKAVGDDAVWEIA 417

Query: 445 ENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPS 504
              +K  LD      +  +  G+  G GAFYGPK +  + DA+ R WQCGTIQVDFNLP+
Sbjct: 418 TKALKDALD------EKGLKYGIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDFNLPA 471

Query: 505 RFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA 564
           RF+  Y++ ++E+  PVM+HRA+ GS ERFIGI++E+  G LP W++P Q ++  I++  
Sbjct: 472 RFDLGYIDENNERKQPVMLHRAIMGSFERFIGILLEHTAGELPFWIAPTQVVIIPISNEH 531

Query: 565 VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRF 624
            +YA E+ +LL    +  E   +NET+N KIR    +++P+II+ GD E + R + +R  
Sbjct: 532 HKYANEVHSLLLDMDVDSEIFNKNETLNKKIRTAEKQRVPMIIVLGDNEVTNRGVALRDR 591

Query: 625 GSTTTQKVSL 634
            +   + +SL
Sbjct: 592 RAREQKDMSL 601


>gi|310287485|ref|YP_003938743.1| threonyl-tRNA synthetase [Bifidobacterium bifidum S17]
 gi|309251421|gb|ADO53169.1| threonyl-tRNA synthetase [Bifidobacterium bifidum S17]
          Length = 676

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 248/637 (38%), Positives = 367/637 (57%), Gaps = 51/637 (8%)

Query: 36  KKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           K  +AV +NG++ DL  P+ +G ++E +  +    L ++RHS  H+MA+AVQ ++P V++
Sbjct: 31  KDIIAVRLNGELRDLCTPLSDGDAVEPVAIDSEDGLGIMRHSATHVMAQAVQELFPNVKL 90

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            +GPII+DGFYYDF  ++PF+ D+L  IEK MQ I+     F ++ ++ E+A  L E   
Sbjct: 91  GVGPIIKDGFYYDFQVDEPFTPDDLKAIEKHMQRIVKSAQSFRRRVVTEEEA--LKEETD 148

Query: 155 EAYKVEILESIPAK-----------ENVTLY----RQGE--WFDLCRGPHVRSTGQVKKF 197
           + +K+E++E   A            + ++ Y    R G   W DLCRGPH+ +T  +K F
Sbjct: 149 QPFKIELIEDKEAHLDPSTATEVSGKELSFYDNVDRDGNTVWKDLCRGPHLPNTRFIKAF 208

Query: 198 FKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFH 257
            K+ + A AYWRG    P + RIYGTAW T+++L  Y   LEE+ KRDHRKL  EMDLF 
Sbjct: 209 -KIERSAAAYWRGSEKNPTMQRIYGTAWATKEDLKAYQTRLEEAAKRDHRKLGAEMDLFS 267

Query: 258 IAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYR 315
             E+ G G+  +H KG  +   +  Y R    K  Y  + TP +    L++ SGH   Y+
Sbjct: 268 FPEEIGPGLAVFHPKGAAVINAMEDYSREMHRKHHYSFVQTPHITKGGLYETSGHLHWYK 327

Query: 316 ANMFAVKCAD-------DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV 368
             M+     D       +  K    + LKPMNCP H  +F    +SYRELP+RL EFG+V
Sbjct: 328 DGMYPPMHLDEEYDADGNITKPGADYYLKPMNCPMHNLIFKSRQRSYRELPLRLFEFGTV 387

Query: 369 YRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLS 428
           YR E SG +HGL RVRG TQDD+H++CT+EQM +E   +   ++++ KDFG     ++LS
Sbjct: 388 YRYEKSGEVHGLTRVRGLTQDDSHIYCTREQMKDELTSLLTFVLNLLKDFGLSDFYLELS 447

Query: 429 TR-PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAI 487
           T+ P+K VGSD +W++A   ++ V      +    ++     G  AFYGPK     +DAI
Sbjct: 448 TKDPDKYVGSDEIWEEATRTLREV------AEASHLDLVADPGGAAFYGPKISVQARDAI 501

Query: 488 GRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           GR WQ  TIQ+DFNLP RF   Y+        PVMIHRA+FGSIERF  +++E++ G  P
Sbjct: 502 GRTWQVSTIQLDFNLPERFQLEYIAKDGTHQRPVMIHRALFGSIERFFAVLLEHYAGAFP 561

Query: 548 LWLSPIQAIVTTITSSAVEYAQEIANLLKS---HHLSIETDFRNETINYKIREHSIKKIP 604
            WL+P+Q +   +   A E+A  +A  +KS     +  E D+ ++    KIR  S  K+P
Sbjct: 562 AWLAPVQVLGVPV---ADEFAPHLAGFVKSLEDEMVRCEIDYSDDRFGKKIRNASKSKVP 618

Query: 605 IIIICGDKEASERSIGIR-RFGSTTTQKVSLLDAIPI 640
            I+I G+++ +  ++  R R GS        L+ +P+
Sbjct: 619 FILIVGEEDMNNNAVSFRFRDGSQ-------LNGVPV 648


>gi|224438525|ref|ZP_03659445.1| threonyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
 gi|313144952|ref|ZP_07807145.1| threonyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
 gi|313129983|gb|EFR47600.1| threonyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
          Length = 603

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 233/556 (41%), Positives = 349/556 (62%), Gaps = 19/556 (3%)

Query: 69  SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQE 128
           SL +IRHSCAH+MA+A++S++PE +  +GP++ +GFYYDF  +   S ++L  IE KM E
Sbjct: 37  SLEIIRHSCAHLMAQAIKSLYPEAKFFVGPVVNEGFYYDFKVDSKISEEDLPSIESKMLE 96

Query: 129 IIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           I  +  P +K  L  + A   F +  +  K  ++  IP  + +++Y QG++ DLCRGPH+
Sbjct: 97  IAKKAYPIVKSTLLRKDAEAKFAN--DELKQAVMSKIP-DDKLSVYTQGDFEDLCRGPHL 153

Query: 189 RSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRK 248
            +T ++ + FKL K+AGAY  GD    ML RIYG A+  +Q L  YL+ +EE++KRDHRK
Sbjct: 154 PNT-KLLQHFKLTKIAGAYLGGDEKAQMLIRIYGIAFADKQSLKDYLFAIEEAKKRDHRK 212

Query: 249 LAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ 306
           L +EM LF   E+ G+G+  W  KG ++ Q L   +   + +  YE +  P++L   +W+
Sbjct: 213 LGQEMGLFTFDEEIGAGLPIWLPKGARLRQNLERLLTIALNERGYEPVRGPEILKSDVWK 272

Query: 307 QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFG 366
           +SGH+D+Y+ NM+       T  D + + +KPMNC GH+ V+    +SYRELP+R  E+G
Sbjct: 273 KSGHYDNYKENMYF------TTIDEQEYGIKPMNCVGHIKVYQSSPRSYRELPLRFYEYG 326

Query: 367 SVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK 426
            V+R+E SG LHGL+RVR FTQDDAH+FC   Q+ +E   I +   SI   F F   M +
Sbjct: 327 IVHRHEKSGVLHGLLRVREFTQDDAHIFCQTNQIKDEVNHIISFTKSILDAFNFAYEM-E 385

Query: 427 LSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDA 486
           LSTRP+K +G+D +W+ A N +K  L+      +++I   +  G GAFYGPK +  + DA
Sbjct: 386 LSTRPDKSIGNDGVWESATNALKNALE------ENKIAYQIDEGGGAFYGPKIDIKITDA 439

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNL 546
           + R WQCGTIQVD NLP RF   Y + ++ +  PVMIHRA+ GS ERF+ I+ E+F G  
Sbjct: 440 LKRKWQCGTIQVDMNLPERFALSYTDENNAQVQPVMIHRAILGSFERFVAILTEHFAGEF 499

Query: 547 PLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPII 606
           PL+++P Q I+  I  + + YA+E+ N +       E   +NE++N KIR    +K+P+I
Sbjct: 500 PLFIAPTQVILIPIGDAQLGYARELRNEIIKIGGYAEIMDKNESLNKKIRLAEKQKVPLI 559

Query: 607 IICGDKEASERSIGIR 622
           ++ G KE   + + IR
Sbjct: 560 VVIGAKEVERKILAIR 575


>gi|322691278|ref|YP_004220848.1| threonyl-tRNA synthase [Bifidobacterium longum subsp. longum JCM
           1217]
 gi|320456134|dbj|BAJ66756.1| threonyl-tRNA synthase [Bifidobacterium longum subsp. longum JCM
           1217]
          Length = 677

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 250/639 (39%), Positives = 370/639 (57%), Gaps = 51/639 (7%)

Query: 36  KKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           K  +AV ING+  DL  P+ +G +++ I  +    LA++RHS  H+MA+AVQ ++P  ++
Sbjct: 31  KNIIAVKINGENRDLYTPLNDGDTVDPIALDSEDGLAIMRHSATHVMAQAVQEVYPNAKL 90

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            +GP+I+DGFYYDF  +QPF+ ++L  IEK+MQ II     F ++ ++ E+A  L E   
Sbjct: 91  GVGPVIKDGFYYDFQVDQPFTPNDLKDIEKRMQRIIKSSQSFRRRSVTEEEA--LKEEAD 148

Query: 155 EAYKVEILESIPA-----------KENVTLY----RQGE--WFDLCRGPHVRSTGQVKKF 197
           + +K+E++E   A           ++ ++ Y    R G   W DLCRGPH+ +T  +K F
Sbjct: 149 QPFKIELIEDKEAHLDPAAATEISEKELSFYDNVDRDGNVVWKDLCRGPHLPNTRYIKAF 208

Query: 198 FKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFH 257
            K+ + A AYWRG    P + R+YGTAW T+++L  Y   LEE+ KRDHRKL  EMDLF 
Sbjct: 209 -KIERSAAAYWRGSEKNPTMQRVYGTAWATKEDLKAYQTRLEEAAKRDHRKLGAEMDLFS 267

Query: 258 IAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYR 315
             ++ G G+  +H KG  +   +  Y R    K  Y  + TP +    L++ SGH   Y+
Sbjct: 268 FPDEIGPGLAVFHPKGAAVINAMEDYSREMHRKHHYSFVQTPHITKGGLYETSGHLHWYK 327

Query: 316 ANMFAVKCAD-------DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV 368
             M+     D       +  K    + LKPMNCP H  +F    +SYRELP+RL EFG+V
Sbjct: 328 DGMYPPMHLDEEKDVDGNITKPGADYYLKPMNCPMHNLIFKSRQRSYRELPLRLFEFGTV 387

Query: 369 YRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLS 428
           YR E SG +HGL RVRG TQDD+H++CT+EQM +E   +   ++++ KDFG     ++LS
Sbjct: 388 YRYEKSGEVHGLTRVRGLTQDDSHIYCTREQMKDELTSLLTFVLNLLKDFGLTDFYLELS 447

Query: 429 TR-PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAI 487
           T+ P K VGSD +W++A N +  V    K S+ + ++        AFYGPK     +DAI
Sbjct: 448 TKDPNKYVGSDEIWEEATNTLAEV---AKESNLELVDDPC---GAAFYGPKISVQARDAI 501

Query: 488 GRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           GR WQ  TIQ+DFNLP RF   Y+        PVMIHRA+FGSIERF  +++E++ G  P
Sbjct: 502 GRTWQVSTIQLDFNLPERFQLEYIAKDGTHQRPVMIHRALFGSIERFFAVLLEHYAGAFP 561

Query: 548 LWLSPIQAIVTTITSSAVEYAQEIANLLKS---HHLSIETDFRNETINYKIREHSIKKIP 604
            WL+P+Q +   +   A E+A  +A  +KS     +  E D+ ++    KIR  S  K+P
Sbjct: 562 AWLAPVQVLGVPV---ADEFAPHLAGFVKSLEDEMVRCEIDYSDDRFGKKIRNASKSKVP 618

Query: 605 IIIICGDKEASERSIGIR-RFGSTTTQKVSLLDAIPILT 642
            I+I G+++ +  ++  R R GS        L+ +P+ T
Sbjct: 619 FILIVGEEDMNNNAVSFRFRDGSQ-------LNGVPVDT 650


>gi|311064400|ref|YP_003971125.1| threonyl-tRNA synthetase [Bifidobacterium bifidum PRL2010]
 gi|310866719|gb|ADP36088.1| ThrS Threonyl-tRNA synthetase [Bifidobacterium bifidum PRL2010]
          Length = 676

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 248/637 (38%), Positives = 367/637 (57%), Gaps = 51/637 (8%)

Query: 36  KKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           K  +AV +NG++ DL  P+ +G ++E +  +    L ++RHS  H+MA+AVQ ++P V++
Sbjct: 31  KDIIAVRLNGELRDLCTPLSDGDAVEPVAIDSEDGLGIMRHSATHVMAQAVQELFPNVKL 90

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            +GPII+DGFYYDF  ++PF+ D+L  IEK MQ I+     F ++ ++ E+A  L E   
Sbjct: 91  GVGPIIKDGFYYDFQVDEPFTPDDLKAIEKHMQRIVKSAQSFRRRVVTEEEA--LKEETD 148

Query: 155 EAYKVEILESIPAK-----------ENVTLY----RQGE--WFDLCRGPHVRSTGQVKKF 197
           + +K+E++E   A            + ++ Y    R G   W DLCRGPH+ +T  +K F
Sbjct: 149 QPFKIELIEDKEAHLDPSTATEVSGKELSFYDNVDRDGNTVWKDLCRGPHLPNTRFIKAF 208

Query: 198 FKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFH 257
            K+ + A AYWRG    P + RIYGTAW T+++L  Y   LEE+ KRDHRKL  EMDLF 
Sbjct: 209 -KIERSAAAYWRGSEKNPTMQRIYGTAWATKEDLKAYQTRLEEAAKRDHRKLGAEMDLFS 267

Query: 258 IAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYR 315
             E+ G G+  +H KG  +   +  Y R    K  Y  + TP +    L++ SGH   Y+
Sbjct: 268 FPEEIGPGLAVFHPKGAAVINAMEDYSREMHRKHHYSFVQTPHITKGGLYETSGHLHWYK 327

Query: 316 ANMFAVKCAD-------DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV 368
             M+     D       +  K    + LKPMNCP H  +F    +SYRELP+RL EFG+V
Sbjct: 328 DGMYPPMHLDEEYDADGNITKPGADYYLKPMNCPMHNLIFKSRQRSYRELPLRLFEFGTV 387

Query: 369 YRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLS 428
           YR E SG +HGL RVRG TQDD+H++CT+EQM +E   +   ++++ KDFG     ++LS
Sbjct: 388 YRYEKSGEVHGLTRVRGLTQDDSHIYCTREQMKDELTSLLTFVLNLLKDFGLSDFYLELS 447

Query: 429 TR-PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAI 487
           T+ P+K VGSD +W++A   ++ V      +    ++     G  AFYGPK     +DAI
Sbjct: 448 TKDPDKYVGSDEIWEEATRTLREV------AEASHLDLVADPGGAAFYGPKISVQARDAI 501

Query: 488 GRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           GR WQ  TIQ+DFNLP RF   Y+        PVMIHRA+FGSIERF  +++E++ G  P
Sbjct: 502 GRTWQVSTIQLDFNLPERFQLEYIAKDGTHQRPVMIHRALFGSIERFFAVLLEHYAGAFP 561

Query: 548 LWLSPIQAIVTTITSSAVEYAQEIANLLKS---HHLSIETDFRNETINYKIREHSIKKIP 604
            WL+P+Q +   +   A E+A  +A  +KS     +  E D+ ++    KIR  S  K+P
Sbjct: 562 AWLAPVQVLGVPV---ADEFAPHLAGFVKSLEDEMVRCEIDYSDDRFGKKIRNASKSKVP 618

Query: 605 IIIICGDKEASERSIGIR-RFGSTTTQKVSLLDAIPI 640
            I+I G+++ +  ++  R R GS        L+ +P+
Sbjct: 619 FILIVGEEDMNNNAVSFRFRDGSQ-------LNGVPV 648


>gi|158334707|ref|YP_001515879.1| threonyl-tRNA synthetase [Acaryochloris marina MBIC11017]
 gi|158304948|gb|ABW26565.1| threonyl-tRNA synthetase [Acaryochloris marina MBIC11017]
          Length = 606

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 237/579 (40%), Positives = 359/579 (62%), Gaps = 22/579 (3%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           L  IRH+ +H+MA AVQ ++P+ QV IGP IE GFYYDFD   PF+  +L  I+K+M +I
Sbjct: 25  LKKIRHTTSHVMAMAVQKLFPDAQVTIGPWIESGFYYDFDSPTPFTDKDLKAIKKEMVKI 84

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG-EWFDLCRGPHV 188
           I +  P  ++ +S E+A++  ++  E YK+EILE +  ++ +TLY  G +W+DLC GPHV
Sbjct: 85  IKKKLPVEREEVSREEAKKRIKALGEPYKLEILEDL--EDPITLYHLGDQWWDLCAGPHV 142

Query: 189 RSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHR 247
            ST  +  K   L  VAGAYWRGD  +  L RIYGTAW T ++L ++    EE+ +RDHR
Sbjct: 143 ESTADLNPKAIALESVAGAYWRGDETKAQLQRIYGTAWETPEQLAEHKRRKEEALRRDHR 202

Query: 248 KLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLW 305
           KL +E+ LF  ++  G G+  W  KG  +   L  ++++ +I+  Y  + TP +    L+
Sbjct: 203 KLGKELGLFLFSDLVGPGLPLWTPKGTLLRSQLEDFLKQEQIQRGYLGVTTPHIARVDLF 262

Query: 306 QQSGHWDSYRANMFAVKCADDTIKDL-RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           + SGHW  Y+ +MF +   +D  +   + F +KPMNCP H+ ++   L+SYR+LP+RLAE
Sbjct: 263 KTSGHWQKYQEDMFPLMSENDADRSSEQGFVMKPMNCPFHIQIYKSELRSYRDLPMRLAE 322

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FG+VYR E SG L GL RVRGFT DD+H+F T +Q+ +E LK+ +LI+S+++    +   
Sbjct: 323 FGTVYRYEQSGELGGLTRVRGFTVDDSHLFVTPDQLDDEFLKVVDLILSVFEKLQLKNFK 382

Query: 425 VKLSTR---PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            +LS R    +K +GSD  W+ ++N ++  ++T+     + I      GE AFYGPK ++
Sbjct: 383 ARLSFRDPDSDKYIGSDEAWEKSQNAIRRAVETLGMEHFEGI------GEAAFYGPKLDF 436

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
           I +D + R+WQ GT+QVD+NLP RF+  ++     +  P+MIHRA FGS+ER IGI+IE 
Sbjct: 437 IFQDVLDREWQLGTVQVDYNLPERFDLEFMGEDGNRQRPIMIHRAPFGSLERLIGILIEE 496

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  PLWL+P Q  + T+    + +AQ +A  L++  + +  D   + +  KIR     
Sbjct: 497 YAGVFPLWLAPEQVRLLTVNDDHMPFAQAVATDLQAAGIRVSVDQSGDRLGKKIRNAEKA 556

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
           KIP++ + GDKE    S+ IR      T+    L AIP+
Sbjct: 557 KIPVMSVIGDKEVEAHSLNIR------TRASGELGAIPV 589


>gi|159489562|ref|XP_001702766.1| predicted protein [Chlamydomonas reinhardtii]
 gi|158280788|gb|EDP06545.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 579

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 243/587 (41%), Positives = 346/587 (58%), Gaps = 28/587 (4%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF--DKEQPFSS 116
           +E+ T ++  +L  IRHSCAHIMA AVQ ++  VQV +GP  + GF+YDF    + P + 
Sbjct: 1   MELKTSDESENLLRIRHSCAHIMAMAVQRLFKGVQVTVGPWTDRGFFYDFAWPADSPLTE 60

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESI--PAKENVTLY 174
            +L +I+K+M +I+  + PF+K+ +S  +A     ++ E YK+EIL+SI  PA       
Sbjct: 61  KDLKKIKKEMAKIMKANLPFVKEEVSPAEAEARIRAQGEPYKLEILQSILQPAGPKPV-- 118

Query: 175 RQGEWFDLCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQ 233
               W+DLC GPHV  TG +     +L  V GAYWRGD    ML+R+YGTAW T ++L  
Sbjct: 119 --APWWDLCAGPHVERTGDINPDAVELENVTGAYWRGDEANAMLTRVYGTAWETPEQLAA 176

Query: 234 YLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDY 291
           +    EE+ KRDHRKL  E++LF I E  G G+++WH  G  +   + S+ +   ++  Y
Sbjct: 177 FKQLKEEAAKRDHRKLGAELNLFSIQESSGGGLVYWHPPGAMVRHLIESFWKELHLQRGY 236

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           + + +P     H+ + SG        +    C +D      T+ L+PMNCP HV+V+  G
Sbjct: 237 QLVYSP-----HIAKVSGACVCVCVCVCVCVCVED-----ETYQLRPMNCPFHVSVYKDG 286

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI 411
             SYR+LP+RLAE G+VYR E SG++HGL RVRGFTQDDAH+FC   Q+  E   + +L+
Sbjct: 287 YYSYRDLPLRLAELGTVYRYERSGTMHGLFRVRGFTQDDAHIFCLPNQITTEIKGVLDLV 346

Query: 412 ISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
             I   FGF    V LSTRPEK VGSD +W  AE  +   L+      Q      V  G 
Sbjct: 347 EEILGTFGFNDYEVNLSTRPEKSVGSDEIWTTAEAALVEALNAKGWKYQ------VDAGG 400

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
           GAFYGPK +  ++DAIGR WQC T+Q+DFNLP RF+  Y +  + K  P+MIHRA+FGS+
Sbjct: 401 GAFYGPKIDIKIRDAIGRKWQCSTVQLDFNLPERFDMHYFDDAAAKQRPIMIHRAIFGSL 460

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           ERF GI+IEN+ G  PLWL+P+Q  + T+  +  EYA  +A  ++   + +E      +I
Sbjct: 461 ERFFGILIENYMGAFPLWLAPVQVRLLTVNDNLAEYAHGVAAQMRKAGVRVEV-VGQASI 519

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
              IR     K P+I + G+KEA   S+ +R +G      + + D I
Sbjct: 520 AKLIRNAEKAKTPVICVVGNKEAESNSLAVRLYGGKELGALPVQDVI 566


>gi|223039114|ref|ZP_03609404.1| threonyl-tRNA synthetase [Campylobacter rectus RM3267]
 gi|222879475|gb|EEF14566.1| threonyl-tRNA synthetase [Campylobacter rectus RM3267]
          Length = 606

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 245/615 (39%), Positives = 375/615 (60%), Gaps = 25/615 (4%)

Query: 39  VAVAINGKVCDL-SDPVREGSIE-IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAI 96
           +A  ++G + D  S   RE + E I     P +L VIRHSCAH+MA+A++ ++P+ +  +
Sbjct: 5   IAYKLDGNIVDTQSINGRENAAEPIYYGNSPDALNVIRHSCAHLMAQAIKELYPQAKFFV 64

Query: 97  GPIIEDGFYYDFDKEQP---FSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESK 153
           GP +EDGFYYDF  ++     S ++L  IE KM+E+       LK   S  KA    + K
Sbjct: 65  GPNVEDGFYYDFKVDEANSKLSDEDLEAIEAKMKELAEAKQDILKA--SSTKAFMSDKFK 122

Query: 154 KEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSN 213
            +  K E+L+ IP  E V+ Y+QG + DLCRGPH+ +T +  +FFKL +VAGAY  GD  
Sbjct: 123 DDELKQEVLKRIPEGE-VSSYKQGNFEDLCRGPHLPNT-KFLRFFKLTRVAGAYLGGDET 180

Query: 214 RPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKG 272
           R M++RIYGTA+  ++ L +++  +EE++KRDHRKL  EM LF   E+ G G+  W   G
Sbjct: 181 REMINRIYGTAFADKESLKEHIRIIEEAKKRDHRKLGVEMKLFAFDEEVGGGLPIWLPNG 240

Query: 273 WKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
            ++   L   + +  +D  YE +  P++L   +W++SGH+ +Y+ NM+       T  D 
Sbjct: 241 GRLRSKLEQILYKAHRDRGYEPVRGPELLKADVWKKSGHYANYKENMYF------TTIDE 294

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
             + +KPMNC GH+ V+   ++SYR+LP++  E+G V+R+E SG LHGL RVR F QDD+
Sbjct: 295 AEYGIKPMNCVGHIKVYQSDIRSYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFAQDDS 354

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
           H+FC   Q+    L+I      I ++FGF   M ++ST+P K +G D +W+ A   +K  
Sbjct: 355 HIFCMPSQIKENILEILKFAGKIMENFGFHYEM-EISTKPAKAIGGDEIWETATKALKEA 413

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
           LD      ++    G+  G GAFYGPK +  + DA+ R WQCGTIQVDFNLP RF+  Y+
Sbjct: 414 LD------ENGFKYGIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDFNLPERFDLGYI 467

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
           ++++E+  PVM+HRA+ GS ERFIGI+IE+  G LP +++P Q ++  I+ + ++YA+ +
Sbjct: 468 DANNERRQPVMLHRALLGSFERFIGILIEHTGGELPFFVAPTQVVIVPISDAHLDYAKTV 527

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
           A  L+   +  E   +NE++N +IR    +++P+I + GD E +  +I +R   +T  QK
Sbjct: 528 AKELRKIGVDSEIASKNESLNKRIRTAEKQRVPMIAVLGDNEVANSAIALRD-RTTREQK 586

Query: 632 VSLLDAIPILTKESL 646
              LD    L K  L
Sbjct: 587 DMKLDEFVGLLKSKL 601


>gi|224283116|ref|ZP_03646438.1| threonyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171]
 gi|313140266|ref|ZP_07802459.1| threonyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171]
 gi|313132776|gb|EFR50393.1| threonyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171]
          Length = 676

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 248/637 (38%), Positives = 367/637 (57%), Gaps = 51/637 (8%)

Query: 36  KKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           K  +AV +NG++ DL  P+ +G ++E +  +    L ++RHS  H+MA+AVQ ++P V++
Sbjct: 31  KDIIAVRLNGELRDLCTPLSDGDAVEPVAIDSEDGLGIMRHSATHVMAQAVQELFPNVKL 90

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            +GPII+DGFYYDF  ++PF+ D+L  IEK MQ I+     F ++ ++ E+A  L E   
Sbjct: 91  GVGPIIKDGFYYDFQVDEPFTPDDLKAIEKHMQRIVKSAQSFRRRVVTEEEA--LKEETD 148

Query: 155 EAYKVEILESIPAK-----------ENVTLY----RQGE--WFDLCRGPHVRSTGQVKKF 197
           + +K+E++E   A            + ++ Y    R G   W DLCRGPH+ +T  +K F
Sbjct: 149 QPFKIELIEDKEAHLDPSTATEVSGKELSFYDNVDRDGNTVWKDLCRGPHLPNTRFIKAF 208

Query: 198 FKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFH 257
            K+ + A AYWRG    P + RIYGTAW T+++L  Y   LEE+ KRDHRKL  EMDLF 
Sbjct: 209 -KIERSAAAYWRGSEKNPTMQRIYGTAWATKEDLKAYQTRLEEAAKRDHRKLGAEMDLFS 267

Query: 258 IAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYR 315
             E+ G G+  +H KG  +   +  Y R    K  Y  + TP +    L++ SGH   Y+
Sbjct: 268 FPEEIGPGLAVFHPKGAAVINAMEDYSREMHRKHHYSFVQTPHITKGGLYETSGHLHWYK 327

Query: 316 ANMFAVKCAD-------DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV 368
             M+     D       +  K    + LKPMNCP H  +F    +SYRELP+RL EFG+V
Sbjct: 328 DGMYPPMHLDEEYDADGNITKPGADYYLKPMNCPMHNLIFKSRQRSYRELPLRLFEFGTV 387

Query: 369 YRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLS 428
           YR E SG +HGL RVRG TQDD+H++CT+EQM +E   +   ++++ KDFG     ++LS
Sbjct: 388 YRYEKSGEVHGLTRVRGLTQDDSHIYCTREQMKDELTSLLTFVLNLLKDFGLSDFYLELS 447

Query: 429 TR-PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAI 487
           T+ P+K VGSD +W++A   ++ V      +    ++     G  AFYGPK     +DAI
Sbjct: 448 TKDPDKYVGSDEIWEEATRTLREV------AEASHLDLVADPGGAAFYGPKISVQARDAI 501

Query: 488 GRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           GR WQ  TIQ+DFNLP RF   Y+        PVMIHRA+FGSIERF  +++E++ G  P
Sbjct: 502 GRTWQVSTIQLDFNLPERFQLEYIAKDGTHQRPVMIHRALFGSIERFFAVLLEHYAGAFP 561

Query: 548 LWLSPIQAIVTTITSSAVEYAQEIANLLKS---HHLSIETDFRNETINYKIREHSIKKIP 604
            WL+P+Q +   +   A E+A  +A  +KS     +  E D+ ++    KIR  S  K+P
Sbjct: 562 AWLAPVQVLGVPV---ADEFAPHLAGFVKSLEDEMVRCEIDYSDDRFGKKIRNASKSKVP 618

Query: 605 IIIICGDKEASERSIGIR-RFGSTTTQKVSLLDAIPI 640
            I+I G+++ +  ++  R R GS        L+ +P+
Sbjct: 619 FILIVGEEDMNNNAVSFRFRDGSR-------LNGVPV 648


>gi|313904501|ref|ZP_07837877.1| threonyl-tRNA synthetase [Eubacterium cellulosolvens 6]
 gi|313470643|gb|EFR65969.1| threonyl-tRNA synthetase [Eubacterium cellulosolvens 6]
          Length = 591

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 232/557 (41%), Positives = 352/557 (63%), Gaps = 14/557 (2%)

Query: 70  LAVIRHSCAHIMAEAVQSIW--PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQ 127
           LAV RHS AHI+A+AV  ++   +VQ AIGP IE+G YYDF   +  ++D+   IE KM+
Sbjct: 7   LAVYRHSMAHILAKAVIELFGKEKVQYAIGPQIENGLYYDFTLPRTLTADDYKMIEDKMR 66

Query: 128 EIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE-WFDLCRGP 186
           E+I R   +  + ++ ++A ELF+ +K  +K E+++ +PA E +T+Y  G+ + DLCRGP
Sbjct: 67  EVIKRREDWTCKEVTKDEALELFKDQK--FKTELIQELPADEKITIYYTGDDYVDLCRGP 124

Query: 187 HVRSTGQVKKF-FKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           HV ++ ++    F++  ++GAYWRGD  +  L RIY TA+  + +L ++  FL E+ +RD
Sbjct: 125 HVSNSQELMNVAFEVRSISGAYWRGDETKDQLQRIYVTAFADKNQLKEFKKFLREAAERD 184

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHL 304
           H+KL  + +LF   E   G+ +W  +GWK+F +L+S+ R   ++  Y+EI+ P + +  L
Sbjct: 185 HKKLGPQQELFMFDETAPGMPYWLPRGWKLFNSLLSFWRGIHEEHGYQEISGPILSNSKL 244

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           WQ SGHW  Y+ NMF +    +   D   +A KPMNCP  + V+   L+SYR+LP R+A+
Sbjct: 245 WQTSGHWGHYKDNMFIIPGEKEDESDY--YAAKPMNCPNAILVYKSRLRSYRDLPFRVAQ 302

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
             +++R E SG L+GL RV+ F QDDAH+  T++Q+ +E   I ++   IY  FG     
Sbjct: 303 VDNIHRKEKSGELNGLFRVQMFRQDDAHILVTEDQIADEIKDIMSIATQIYGTFGL-SYG 361

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
            +LSTRP+  +G  A+WD AE  +K +L+ +       +N G    +GAFYGPK +  +K
Sbjct: 362 AELSTRPDDFMGDIAVWDKAEASLKEILNDVYGEGNYEVNEG----DGAFYGPKIDLKMK 417

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           DA+GR+WQ GTIQ+DF LP  F+  Y         PVMIHRA+FGS+ERFIGI+IEN+K 
Sbjct: 418 DALGREWQMGTIQLDFQLPLNFDMKYAAQDGTVKQPVMIHRAIFGSLERFIGILIENYKA 477

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
           + P WLSP Q  V  I +   EYA+++ + LK+  + +E D+ ++ +N KI+       P
Sbjct: 478 SFPFWLSPYQVGVVPIRTEHNEYAKKVVDALKAAGIRVEVDYADKNMNEKIKAFKTYHDP 537

Query: 605 IIIICGDKEASERSIGI 621
            II+ GDKEASE ++ I
Sbjct: 538 YIIVVGDKEASEGTVSI 554


>gi|225352131|ref|ZP_03743154.1| hypothetical protein BIFPSEUDO_03746 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225157378|gb|EEG70717.1| hypothetical protein BIFPSEUDO_03746 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 677

 Score =  461 bits (1185), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 250/635 (39%), Positives = 364/635 (57%), Gaps = 47/635 (7%)

Query: 36  KKAVAVAINGKVCDLSDPVREGSI-EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           K  +AV +NG+  DL   + +G + E I  +    LA++RHS  H+MA+AVQ I P+ ++
Sbjct: 31  KNIIAVRLNGEPRDLYTELHDGDVVEPIALDSEDGLAIMRHSATHVMAQAVQEIRPDAKL 90

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            +GP+I+DGFYYDFD E PF+ D+L +IEK+MQ II     F ++ ++ E+A  L E   
Sbjct: 91  GVGPVIKDGFYYDFDVETPFTPDDLKEIEKRMQRIIKSSQSFRRRVVTEEEA--LAEESD 148

Query: 155 EAYKVEILES------------IPAKENVTLY----RQGE--WFDLCRGPHVRSTGQVKK 196
           + YK+E+++             I  KE ++ Y    R G   W DLCRGPH+ +T  +K 
Sbjct: 149 QPYKIELIKDKEAHLDPEAATEISGKE-LSFYDNVDRDGNVVWKDLCRGPHLPNTRYIKA 207

Query: 197 FFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLF 256
           F K+ + A AYWRG    PML RIYG A+ T+++L  Y   LEE+ KRDHRKL  EMDLF
Sbjct: 208 F-KIERSAAAYWRGSEANPMLQRIYGAAFATKEDLKAYQTRLEEAAKRDHRKLGAEMDLF 266

Query: 257 HIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSY 314
              ++ G G+  +H KG  +   +  Y R    K  Y  + TP +    L++ SGH   Y
Sbjct: 267 SFPDEIGPGLAVFHPKGAAVINAMEDYSREMHRKHHYSFVQTPHITKGGLYETSGHLHWY 326

Query: 315 RANMFAVKCADD-------TIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGS 367
           +  M+     D+        +K    + LKPMNCP H  +F    +SYRELP+RL EFG+
Sbjct: 327 KDGMYPAMRLDEEKDENGNVVKQGFDYYLKPMNCPMHNLIFKSRQRSYRELPLRLFEFGT 386

Query: 368 VYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKL 427
           VYR E SG +HGL RVRG TQDD+H++CT+EQM +E   +   ++ + KDFG +   ++L
Sbjct: 387 VYRYEKSGEVHGLTRVRGLTQDDSHIYCTREQMKDELKNLLTFVLGLLKDFGLDDFYLEL 446

Query: 428 STR-PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDA 486
           ST+ P K VGSD +W++A N +  V    K S  + ++        AFYGPK     +DA
Sbjct: 447 STKDPHKYVGSDEIWEEATNTLAEV---AKESGLELVDDPC---GAAFYGPKISVQARDA 500

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNL 546
           IGR WQ  TIQ+DFNLP RF   Y+ +      PVMIHRA+FGSIERF  +++E++ G  
Sbjct: 501 IGRTWQVSTIQLDFNLPERFGLEYIAADGTHQRPVMIHRALFGSIERFFAVLLEHYAGAF 560

Query: 547 PLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPII 606
           P WL+P+Q +   +      + Q+    L+   +  E D  ++    KIR  S  K+P I
Sbjct: 561 PAWLAPVQVLGVPVADEFAPHLQQFIASLEEETVRCEIDMSDDRFGKKIRNASKSKVPFI 620

Query: 607 IICGDKEASERSIGIR-RFGSTTTQKVSLLDAIPI 640
           +I G+++ +  ++  R R GS        L+ +P+
Sbjct: 621 LIVGEEDMNNNAVSFRFRDGSQ-------LNGVPV 648


>gi|126663528|ref|ZP_01734525.1| threonine--tRNA ligase (threonine tRNA synthetase) [Flavobacteria
           bacterium BAL38]
 gi|126624476|gb|EAZ95167.1| threonine--tRNA ligase (threonine tRNA synthetase) [Flavobacteria
           bacterium BAL38]
          Length = 633

 Score =  461 bits (1185), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 245/623 (39%), Positives = 376/623 (60%), Gaps = 23/623 (3%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIEII-TPEDPRSLAVIRHSCAH 79
           AT  DVA+SIS  LA+  ++ + NG   + +  +      ++ T  D        HS +H
Sbjct: 5   ATPMDVAKSISEGLARNVISASYNGTTIETTTTLTTDGTLVLYTWNDVAGKKAFWHSTSH 64

Query: 80  IMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQIEKKMQEIIARDSPFLK 138
           +MA+A++ ++P +++ +GP I++GFYYD D  EQ  +  +  +IE ++ EI      F  
Sbjct: 65  VMAQALEELFPGIKLTLGPAIDNGFYYDVDFGEQRITDADFKKIEDRVLEISREKHEFKM 124

Query: 139 QYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFF 198
           + +S  +A +++  K   YK E++ ++     +T      +FDLCRG H+ +TG +K   
Sbjct: 125 RPVSKAEALDVY--KDNEYKTELISNL-EDGTITFCDHANFFDLCRGGHIPNTGIIKAM- 180

Query: 199 KLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI 258
           K++ VAGAYWRGD     L+R+YG ++  Q++LT YL  LEE+++RDHRKL +E+DLFH 
Sbjct: 181 KILSVAGAYWRGDEKNKQLTRVYGISFPKQKDLTDYLELLEEAKRRDHRKLGKELDLFHF 240

Query: 259 AED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           +   G G+  W  KG  +   L  ++++ + K  YE++ TP +  + L+  SGH+  Y A
Sbjct: 241 SPKVGQGLPLWLPKGAALRDRLEQFLKKAQKKAGYEQVVTPHIGMKDLYVTSGHYAKYGA 300

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
           + F       T  +   F LKPMNCP H  ++N    SY++LP R AEFG+VYR E SG 
Sbjct: 301 DSFQ---PIHTPAEGEEFLLKPMNCPHHCEIYNARPWSYKDLPKRYAEFGTVYRYEQSGE 357

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR----PE 432
           LHGL RVRGFTQDDAH+FCT +Q+  E   + +L++ ++   GFE    ++S R    P+
Sbjct: 358 LHGLTRVRGFTQDDAHIFCTPDQLDTEFKNVIDLVLYVFGSLGFENFTAQVSVRDLDNPD 417

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDR-INTGVLLGEGAFYGPKFEYILKDAIGRDW 491
           K +GS   W+ AEN        I ++++D+ +N  +  GE AFYGPK ++++KDA+GR W
Sbjct: 418 KYIGSVENWEKAEN-------AIISAAKDKGLNYVIEAGEAAFYGPKLDFMVKDALGRSW 470

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLS 551
           Q GTIQVD+NLP RF   Y  S  +   PVMIHRA FGS+ERFI I++E+  GN P+WL 
Sbjct: 471 QLGTIQVDYNLPERFELTYKGSDDKLHRPVMIHRAPFGSMERFIAILLEHTAGNFPIWLM 530

Query: 552 PIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
           P QAI+ +++     YA+++ +LL++H +    D RNETI  KIRE  + K P ++I G+
Sbjct: 531 PEQAIILSLSEKYENYAKKVLDLLENHEIRALIDNRNETIGKKIREAEMNKYPFMLIVGE 590

Query: 612 KEASERSIGIRRFGSTTTQKVSL 634
           +E    +I +R+ G      +S+
Sbjct: 591 EEEKNGTISVRQRGQEGKGNISV 613


>gi|117928565|ref|YP_873116.1| threonyl-tRNA synthetase [Acidothermus cellulolyticus 11B]
 gi|117649028|gb|ABK53130.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Acidothermus
           cellulolyticus 11B]
          Length = 685

 Score =  461 bits (1185), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 248/651 (38%), Positives = 376/651 (57%), Gaps = 43/651 (6%)

Query: 12  GSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPEDPRSL 70
           G  +  PV AT + + +       +  +AV ING + DL+  + +G  +E +  + P   
Sbjct: 41  GEPREVPVGATAATLFDD------RAVIAVRINGVLRDLATVLADGDEVEPVRIDTPDGR 94

Query: 71  AVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEII 130
           +++RHS AH++A+AVQ+++P  ++ IGP IE+GFYYDFD  QPF+ D+L +IE++M++II
Sbjct: 95  SILRHSTAHVLAQAVQALFPGTRLGIGPPIENGFYYDFDTAQPFTPDDLRRIEQRMRDII 154

Query: 131 ARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK------------ENVTLYRQGE 178
                F ++ ++ E+AR   E   E YK+E++    A             E +T+Y    
Sbjct: 155 REGQIFRRRVVTDEQART--ELAGEPYKLELISVKSAAADTEGAGAEIGGEELTIYDNLR 212

Query: 179 ------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELT 232
                 W DLCRGPH+ ST  +  F  L + A AYWRG    P L RIYGTAW ++  L 
Sbjct: 213 PDGSLAWKDLCRGPHLPSTRHIPAF-TLTRTAAAYWRGRETNPQLQRIYGTAWESRDALQ 271

Query: 233 QYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDD 290
           +YL  L E+E+RDHR+L  E+DLF   ++ GSG+  +H KG  I + + +Y R +  K  
Sbjct: 272 KYLDLLREAERRDHRRLGVELDLFSFPDEIGSGLAVFHPKGGIIRREMENYSRLQHEKAG 331

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH 350
           Y  +NTP +    L+  SGH  S+   MF     D  +    T+ LKPMNCP H+ ++  
Sbjct: 332 YLFVNTPHITKHDLFATSGHLQSFAEGMFPPFELDGGV----TYYLKPMNCPMHILIYRS 387

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
             +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDDAH+FCT+EQM  E   +   
Sbjct: 388 RGRSYRELPMRLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIFCTREQMGAELRDLLRF 447

Query: 411 IISIYKDFGFEKIMVKLSTRPE--KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
           ++ + +D+G     ++LSTR +  K VG  A W  A   ++      ++S  + +     
Sbjct: 448 VLDLLRDYGLTDFYLELSTRDDSPKFVGDPADWAQATEALEAA---ARDSGLELVPDP-- 502

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
            G  A+YGPK     +DAIGR WQ  TIQ+DFNLP RF+  Y  +   +  PVMIHRA+F
Sbjct: 503 -GGAAYYGPKISVQARDAIGRSWQISTIQLDFNLPKRFDLEYQAADGTRQRPVMIHRALF 561

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQE-IANLLKSHHLSIETDFR 587
           GSIERF G+++E++ G  P WL+P+QA+   ++ + V Y ++ +   L++  +  E D  
Sbjct: 562 GSIERFFGVLLEHYAGAFPPWLAPVQAVGIPVSDAHVPYLRDTVGASLRAAGIRYEVDDS 621

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           ++ +  KIR  + +KIP ++I GD + +  ++  R    +    V + DA+
Sbjct: 622 DDRMQKKIRNAAKQKIPYLLIAGDDDIARHAVSFRYRDGSQKNGVPIADAV 672


>gi|291456785|ref|ZP_06596175.1| threonine--tRNA ligase [Bifidobacterium breve DSM 20213]
 gi|291382062|gb|EFE89580.1| threonine--tRNA ligase [Bifidobacterium breve DSM 20213]
          Length = 677

 Score =  461 bits (1185), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 248/637 (38%), Positives = 368/637 (57%), Gaps = 51/637 (8%)

Query: 36  KKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           K  VAV +NG+  DL  P+ +G ++E IT +    LA++RHS  H+MA+AVQ ++P  ++
Sbjct: 31  KNIVAVKLNGENRDLYTPLADGDTVEPITLDSEDGLAIMRHSATHVMAQAVQEVYPNAKL 90

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            +GP+I+DGFYYDF  ++PF+ ++L  IEK+MQ II     F ++ ++ E+A  L E   
Sbjct: 91  GVGPVIKDGFYYDFQVDKPFTPEDLKDIEKRMQRIIKSSQSFRRRSVTEEEA--LKEEAD 148

Query: 155 EAYKVEILESIPA-----------KENVTLY----RQGE--WFDLCRGPHVRSTGQVKKF 197
           + +K+E++E   A           ++ ++ Y    R G   W DLCRGPH+ +T  +K F
Sbjct: 149 QPFKIELIEDKEAHLDPAAATEISEKELSFYDNVDRDGNVVWKDLCRGPHLPNTRYIKAF 208

Query: 198 FKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFH 257
            K+ + A AYWRG    P + RIYGTAW  +++L  Y   LEE+ KRDHRKL  EMDLF 
Sbjct: 209 -KIERSAAAYWRGSEKNPTMQRIYGTAWANKEDLKAYQTRLEEAAKRDHRKLGAEMDLFS 267

Query: 258 IAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYR 315
             ++ G G+  +H KG  +   +  Y R    K  Y  + TP +    L++ SGH   Y+
Sbjct: 268 FPDEIGPGLAVFHPKGAAVINAMEDYSREMHRKHHYSFVQTPHITKGGLYETSGHLHWYK 327

Query: 316 ANMFAVKCAD-------DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV 368
             M+     D       +  K    + LKPMNCP H  +F    +SYRELP+RL EFG+V
Sbjct: 328 DGMYPPMHLDEEYDEDGNVTKPGFDYYLKPMNCPMHNLIFKSRQRSYRELPLRLFEFGTV 387

Query: 369 YRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLS 428
           YR E SG +HGL RVRG TQDD+H++CT+EQM +E   +   ++++ KDFG     ++LS
Sbjct: 388 YRYEKSGEVHGLTRVRGLTQDDSHIYCTREQMKDELTSLLTFVLNLLKDFGLSDFYLELS 447

Query: 429 TR-PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAI 487
           T+ P+K VGSD +W++A   ++ V      +    ++     G  AFYGPK     +DAI
Sbjct: 448 TKDPDKYVGSDEIWEEATRTLREV------AEASHLDLVADPGGAAFYGPKISVQARDAI 501

Query: 488 GRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           GR WQ  TIQ+DFNLP RF   Y+        PVMIHRA+FGSIERF  +++E++ G  P
Sbjct: 502 GRTWQVSTIQLDFNLPERFQLEYIAKDGTHQRPVMIHRALFGSIERFFAVLLEHYAGAFP 561

Query: 548 LWLSPIQAIVTTITSSAVEYAQEIANLLKS---HHLSIETDFRNETINYKIREHSIKKIP 604
            WL+P+Q +   +   A E+A  +A  +KS     +  E D+ ++    KIR  S  K+P
Sbjct: 562 AWLAPVQVLGVPV---ADEFAPHLAGFVKSLEDEMVRCEIDYSDDRFGKKIRNASKSKVP 618

Query: 605 IIIICGDKEASERSIGIR-RFGSTTTQKVSLLDAIPI 640
            I+I G+++ +  ++  R R GS        L+ +P+
Sbjct: 619 FILIVGEEDMNNNAVSFRFRDGSQ-------LNGVPV 648


>gi|172038860|ref|YP_001805361.1| threonyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
 gi|171700314|gb|ACB53295.1| threonyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
          Length = 608

 Score =  460 bits (1184), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 238/565 (42%), Positives = 354/565 (62%), Gaps = 16/565 (2%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           L  IRH+ +H+MA AVQ ++P+ QV IGP  E GFYYDFD  +PF+  +L  I+K+M +I
Sbjct: 27  LKRIRHTASHVMAMAVQKLFPKAQVTIGPWTETGFYYDFDVPEPFTDKDLKAIKKEMIKI 86

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG-EWFDLCRGPHV 188
           I +  P +++ +S E+A++     +E YK+EILE +  +  +TLY  G +W+DLC GPHV
Sbjct: 87  IKKKLPLIREEVSAEEAKKRITELQEPYKLEILEGL--EPPITLYHLGDQWWDLCAGPHV 144

Query: 189 RSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHR 247
            +TG +  K F +  VAGAYWRGD  +  L RIYGTAW T ++L +Y    EE+ KRDHR
Sbjct: 145 ETTGDLNPKAFDIESVAGAYWRGDETKAQLQRIYGTAWETPEQLAEYKRRKEEALKRDHR 204

Query: 248 KLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLW 305
           +L +E+ LF  ++  G G+  W  KG  I  TL  ++++ ++K  Y  + TP +    L+
Sbjct: 205 RLGKELGLFIFSDPVGPGLPLWTPKGTIIRSTLEDFLKQEQLKRGYLPVVTPHIGRVDLF 264

Query: 306 QQSGHWDSYRANMFAVKCADDTIKDLRT-FALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           + SGHW +Y+ +MF +    +  K     F LKPMNCP H+ ++   L+SYR+LP+RLAE
Sbjct: 265 KISGHWQNYKEDMFPMMAETEEAKTSEMGFVLKPMNCPFHIQIYKSELRSYRDLPMRLAE 324

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FG+VYR E SG L GL RVRGFT DD+H+F T +Q+ +E L + +LI+S+++    +   
Sbjct: 325 FGTVYRYEQSGELGGLTRVRGFTVDDSHLFVTPDQLDDEFLNVVDLILSVFRSLQLKNFK 384

Query: 425 VKLSTR---PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            +LS R    +K +GS+  W+ AEN ++  + T++      ++     GE AFYGPK ++
Sbjct: 385 ARLSFRDPNSDKYIGSNEAWNKAENAIRRAVQTLE------MDYFEAEGEAAFYGPKLDF 438

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
           I +DA+ R+WQ GT+QVD+NLP RF   YV     +  PVMIHRA FGS+ER IGI+IE 
Sbjct: 439 IFQDALEREWQLGTVQVDYNLPERFELEYVGEEGNRHRPVMIHRAPFGSLERLIGILIEE 498

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G+ PLWL+P Q  +  ++   ++Y +++AN + S  +  E D   E +   IR    +
Sbjct: 499 YAGDFPLWLAPTQVRLLPVSDVQLDYVKDVANKMLSLGIRAEADTSGERLGKMIRNGEKQ 558

Query: 602 KIPIIIICGDKEASERSIGIRRFGS 626
           KIP++ I G KE    ++ IR   S
Sbjct: 559 KIPVMAIVGAKEVEANALSIRTRAS 583


>gi|15790739|ref|NP_280563.1| threonyl-tRNA synthetase [Halobacterium sp. NRC-1]
 gi|10581281|gb|AAG20043.1| threonyl-tRNA synthetase [Halobacterium sp. NRC-1]
          Length = 650

 Score =  460 bits (1184), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 240/624 (38%), Positives = 365/624 (58%), Gaps = 23/624 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           S + +T PDGS       AT  DVA  I   L +  VA  I+ ++    +P+ E   IEI
Sbjct: 12  SSVTVTLPDGSTLEVASGATVEDVAHEIGPGLGRDTVAGKIDHELVAKEEPISEDCEIEI 71

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +T +    L V+RH+ AH++A+A++   P+ ++ IGP  ++GFYYD    +   +D+L +
Sbjct: 72  VTDQSDEYLDVLRHTAAHVLAQAIRRHHPDAKLTIGPYTDEGFYYDIANVE-LDADDLDE 130

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWF 180
           I+ +   II  D    +       ARE +   +  +K EIL++  A +  V+ Y QG++ 
Sbjct: 131 IQAEAASIIDDDLDVERVEYDRADAREHYADNE--FKREILDAEAAGDGPVSFYTQGDFE 188

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLC+GPHV STG++  F ++++ + AYWRGD  R  L+R+YGTA+ T+ +L +YL   EE
Sbjct: 189 DLCKGPHVDSTGEIGGF-EVLETSAAYWRGDEERETLTRVYGTAFPTESDLQEYLARREE 247

Query: 241 SEKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           +++RDHRKL REMDLF I +  G G+  +H  G  + + L  Y+R    +  Y+E+ TP 
Sbjct: 248 AKERDHRKLGREMDLFSIPDVTGPGLPLYHPNGKTVLRELSEYVRGLNSEMGYDEVETPH 307

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW+QSGH+D+Y  +MF +   D+       + LKPMNCPGH  +FN G  SYR+L
Sbjct: 308 LFRTELWKQSGHYDNYVDDMFLLDVNDEE------YGLKPMNCPGHATIFNEGSWSYRDL 361

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           PVR  E G VYR E  G L GL RV  FT DD HVF   +Q+  E  ++ + I  +   F
Sbjct: 362 PVRYFEDGKVYRKEQRGELSGLSRVWAFTIDDGHVFARADQIEAEVRRLMDTITEVLDTF 421

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
             +   V L+TRPEK VGSD +W+ +E  ++ VLD      Q  ++  V  G+GAFYGPK
Sbjct: 422 DLD-YEVALATRPEKSVGSDDIWEQSERQLREVLD------QQGVDYDVEPGDGAFYGPK 474

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++  +DA+GR W   T+Q+DFN+P RF+  Y  S ++   PVMIHRA++GS ERF  ++
Sbjct: 475 IDFGFEDALGRSWDGPTVQLDFNMPDRFDLEYTGSDNDAHQPVMIHRALYGSYERFFMVL 534

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE++ G  P WL+P Q  +  +T   + YA  + N L  + + +E   R+ T+  KI++ 
Sbjct: 535 IEHYNGRFPTWLAPEQVRILPVTDDNLGYAHRVKNELGDYRVEVED--RDWTVGKKIQQA 592

Query: 599 SIKKIPIIIICGDKEASERSIGIR 622
               +P +++ GD E    ++ +R
Sbjct: 593 HDDNVPYMLVVGDDEEDADAVSVR 616


>gi|160914239|ref|ZP_02076460.1| hypothetical protein EUBDOL_00249 [Eubacterium dolichum DSM 3991]
 gi|158433866|gb|EDP12155.1| hypothetical protein EUBDOL_00249 [Eubacterium dolichum DSM 3991]
          Length = 610

 Score =  460 bits (1184), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 248/611 (40%), Positives = 389/611 (63%), Gaps = 23/611 (3%)

Query: 39  VAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP 98
           V++  NG+   L    +E   ++I  ++   L+V+ HSCAH+MA+AV+ ++P+ +  +GP
Sbjct: 12  VSLFFNGRRIHLKSKKKEEEKKMIDIKEHEQLSVMNHSCAHMMAQAVKRLYPQAKFWVGP 71

Query: 99  IIEDGFYYDFD-KEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAY 157
           ++ +GFYYD D  +Q    ++LA+IEK+M++I       +++ +S ++A E+F    + Y
Sbjct: 72  VVSEGFYYDIDLGDQVIKDEDLAKIEKEMKKIAKDGKRIVRKEISKDEALEMFGD--DPY 129

Query: 158 KVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPML 217
           KV++++ +    N+T Y+QGE+ DLCRGPHV S  Q+K F KL+K +GAYW+GD+N  +L
Sbjct: 130 KVDLIQDL-EDGNITCYQQGEFIDLCRGPHVESVKQLKNF-KLLKHSGAYWKGDANNKVL 187

Query: 218 SRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQ 277
            RIYG  + T +EL ++L+ LEE++KRDH+KL RE+ +F ++E   G+ F+   G  +  
Sbjct: 188 QRIYGVCFPTAEELEEHLHLLEEAKKRDHKKLGRELGIFMMSEYAPGMPFFLPNGMILRN 247

Query: 278 TLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFAL 336
            L ++      K+ Y+ I TP ++ + LW+ SGHWD+Y+ NM+ +   DD     R FA+
Sbjct: 248 ILENFWYEEHTKEHYQFIKTPIMMSKELWETSGHWDNYKENMY-ISMVDD-----REFAI 301

Query: 337 KPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT 396
           KPMNCPG +  +  GL SY++ P+R+ E G V+R+E SG+L+GL RVR FTQDDAH+F  
Sbjct: 302 KPMNCPGALLAYKAGLHSYKDFPLRMGELGQVHRHEASGALNGLFRVRTFTQDDAHIFMR 361

Query: 397 KEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE-KRVGSDALWDDAENIMKGVLDTI 455
            +Q+ +E + + + I  IY   G     ++LSTRPE K +G  A+W+ +E  +       
Sbjct: 362 PDQIESEVMSLISFIDRIYASLGL-SYRIELSTRPEEKYIGDLAIWEASEAALA---AAC 417

Query: 456 KNSSQD-RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH 514
           K++ +D ++N G    +GAFYGPK ++ +KD++GR+WQCGTIQ+D NLP RF+  YV S 
Sbjct: 418 KHAGKDYKVNPG----DGAFYGPKLDFHIKDSLGREWQCGTIQLDMNLPERFDLTYVESD 473

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTI-TSSAVEYAQEIAN 573
             K  PVM+HR +FGSIERFIGI+IE+F G+ P WL+P Q +V  +     + YA+++  
Sbjct: 474 GSKARPVMLHRVIFGSIERFIGILIEHFAGHFPTWLAPQQIMVVPVHYEKHLSYAEKVNE 533

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
           +L  +    + D RNE + Y+IRE  + KIP  I+ GD E    ++ IRR     +  + 
Sbjct: 534 MLVQNGFRSKLDARNEKLGYRIREAQLAKIPYQIVLGDGEEENGTVTIRRAQGKDSTTLP 593

Query: 634 LLDAIPILTKE 644
           L   I +L +E
Sbjct: 594 LDAFIAMLKEE 604


>gi|28493229|ref|NP_787390.1| threonyl-tRNA synthetase [Tropheryma whipplei str. Twist]
 gi|73919842|sp|Q83GK5|SYT_TROWT RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|28476270|gb|AAO44359.1| threonyl-tRNA synthetase [Tropheryma whipplei str. Twist]
          Length = 640

 Score =  460 bits (1184), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 233/597 (39%), Positives = 359/597 (60%), Gaps = 23/597 (3%)

Query: 39  VAVAINGKVCDLSDPVREGSI-EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIG 97
           VA+  + ++ DLS+ +  G + E I  + P  L ++RHSCAH++A+AVQSI+ + ++ IG
Sbjct: 14  VAMICDDRLLDLSESIPSGKVPEPIELDSPHGLDILRHSCAHVLAQAVQSIYGDAKLGIG 73

Query: 98  PIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAY 157
           P  E+GFYYDF   +PFSSD L  IE KM+EI+  D  F+++ +  + A   F  + E +
Sbjct: 74  PFTENGFYYDFSVNEPFSSDSLRVIEDKMREIVHSDQKFVRKVVDRQSAHSQF--RDEPF 131

Query: 158 KVEILESIPAKENVTLYRQGE-------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRG 210
           K+EI+ +    + +++Y   +       W D CRGPH+ ST  +   F L  V+  YWRG
Sbjct: 132 KLEIINA--TDDTLSIYYNIDADSGSVRWMDFCRGPHLPSTRFIGDAFALTHVSSVYWRG 189

Query: 211 DSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWH 269
           +S+ P + R+YGTAW + ++L  YL  +E ++  DHRKL +E+DLF + ++ G G+  +H
Sbjct: 190 NSDNPQMQRVYGTAWGSAKDLKGYLDRVELAKLVDHRKLGKELDLFSLPDEIGPGLALFH 249

Query: 270 RKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA-VKCADDT 327
            KG  I   +  Y R R +++ Y  + +P +  + L+++SGH   Y  +MF  ++   D+
Sbjct: 250 VKGGIIRSEMEQYARLRHLEEGYNFVYSPHITKRDLFERSGHLQWYGQSMFPPMRLDKDS 309

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
                 + LKPMNCP H  VF+   +SYR+LP+RLAEFG+VYR E SG++HGL RVRG T
Sbjct: 310 CSQGFDYYLKPMNCPFHSLVFSSQPRSYRQLPLRLAEFGTVYRYEQSGAIHGLARVRGLT 369

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE--KRVGSDALWDDAE 445
           QDDAH++ T+E   +E  K     IS+  D+G ++  +++STR    K +GSD  W  A 
Sbjct: 370 QDDAHIYATRESFEDEVSKALQFTISLLGDYGLDQFYIEISTRDASGKFLGSDEDWAYAT 429

Query: 446 NIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSR 505
           +I++ V       ++D        G  AFYGPK     KDAIGR WQ  TIQ+DFNLP R
Sbjct: 430 HILQKVAQDSGLQTRDDP------GGAAFYGPKISVQAKDAIGRYWQMSTIQLDFNLPER 483

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAV 565
           F  FY +   E+  P+M+HRA+FGS ERF  ++ E++ G  P WLSP Q +   +TS+ +
Sbjct: 484 FGLFYTDRAGERKRPIMVHRALFGSFERFFAVLTEHYAGAFPPWLSPEQVVALPVTSAHI 543

Query: 566 EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
            Y +E  +   S  +    D+  + +  KIR +  +KIP +++ GD++ + R++ IR
Sbjct: 544 PYLEEFVSRFSSRLIRARVDYMQDRLPKKIRSYVKEKIPFVLVAGDRDLTNRTVAIR 600


>gi|169236481|ref|YP_001689681.1| threonyl-tRNA synthetase [Halobacterium salinarum R1]
 gi|73921305|sp|Q9HP27|SYT_HALSA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|229470722|sp|B0R6G6|SYT_HALS3 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|167727547|emb|CAP14335.1| threonine--tRNA ligase [Halobacterium salinarum R1]
          Length = 640

 Score =  460 bits (1183), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 240/624 (38%), Positives = 365/624 (58%), Gaps = 23/624 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           S + +T PDGS       AT  DVA  I   L +  VA  I+ ++    +P+ E   IEI
Sbjct: 2   SSVTVTLPDGSTLEVASGATVEDVAHEIGPGLGRDTVAGKIDHELVAKEEPISEDCEIEI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +T +    L V+RH+ AH++A+A++   P+ ++ IGP  ++GFYYD    +   +D+L +
Sbjct: 62  VTDQSDEYLDVLRHTAAHVLAQAIRRHHPDAKLTIGPYTDEGFYYDIANVE-LDADDLDE 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWF 180
           I+ +   II  D    +       ARE +   +  +K EIL++  A +  V+ Y QG++ 
Sbjct: 121 IQAEAASIIDDDLDVERVEYDRADAREHYADNE--FKREILDAEAAGDGPVSFYTQGDFE 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLC+GPHV STG++  F ++++ + AYWRGD  R  L+R+YGTA+ T+ +L +YL   EE
Sbjct: 179 DLCKGPHVDSTGEIGGF-EVLETSAAYWRGDEERETLTRVYGTAFPTESDLQEYLARREE 237

Query: 241 SEKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           +++RDHRKL REMDLF I +  G G+  +H  G  + + L  Y+R    +  Y+E+ TP 
Sbjct: 238 AKERDHRKLGREMDLFSIPDVTGPGLPLYHPNGKTVLRELSEYVRGLNSEMGYDEVETPH 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW+QSGH+D+Y  +MF +   D+       + LKPMNCPGH  +FN G  SYR+L
Sbjct: 298 LFRTELWKQSGHYDNYVDDMFLLDVNDEE------YGLKPMNCPGHATIFNEGSWSYRDL 351

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           PVR  E G VYR E  G L GL RV  FT DD HVF   +Q+  E  ++ + I  +   F
Sbjct: 352 PVRYFEDGKVYRKEQRGELSGLSRVWAFTIDDGHVFARADQIEAEVRRLMDTITEVLDTF 411

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
             +   V L+TRPEK VGSD +W+ +E  ++ VLD      Q  ++  V  G+GAFYGPK
Sbjct: 412 DLD-YEVALATRPEKSVGSDDIWEQSERQLREVLD------QQGVDYDVEPGDGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++  +DA+GR W   T+Q+DFN+P RF+  Y  S ++   PVMIHRA++GS ERF  ++
Sbjct: 465 IDFGFEDALGRSWDGPTVQLDFNMPDRFDLEYTGSDNDAHQPVMIHRALYGSYERFFMVL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE++ G  P WL+P Q  +  +T   + YA  + N L  + + +E   R+ T+  KI++ 
Sbjct: 525 IEHYNGRFPTWLAPEQVRILPVTDDNLGYAHRVKNELGDYRVEVED--RDWTVGKKIQQA 582

Query: 599 SIKKIPIIIICGDKEASERSIGIR 622
               +P +++ GD E    ++ +R
Sbjct: 583 HDDNVPYMLVVGDDEEDADAVSVR 606


>gi|330861018|emb|CBX71290.1| threonyl-tRNA synthetase [Yersinia enterocolitica W22703]
          Length = 457

 Score =  460 bits (1183), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 213/449 (47%), Positives = 314/449 (69%), Gaps = 10/449 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + +    +  DVA  I   LAK  +A  +NG++ D SD +  +  + IIT +
Sbjct: 4   ITLPDGSQRQYDHAVSVLDVALDIGPGLAKACIAGRVNGELVDASDLIESDAQLAIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L ++RHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D ++  + ++L  +EK+
Sbjct: 64  DAEGLEILRHSCAHLLGHAIKQLWPDTKMAIGPVIDNGFYYDVDIDRTLTQEDLDLLEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+  +D   +K+ +S ++AR+ F ++ E YKV IL E+I   ++  LY   E+ D+CR
Sbjct: 124 MHELADKDYDVIKKKVSWQEARDTFAARGEDYKVAILDENISRDDHPGLYHHEEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +    FKL K +GAYWRGDS   ML RIYGTAW+ +++L  YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCHHFKLQKTSGAYWRGDSKNKMLQRIYGTAWSDKKQLNAYLQRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF+ L +++R K+K+  Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELETFVRMKLKEYQYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW++Y  +MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWENYAEHMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  FGFEKI
Sbjct: 357 EFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQVRDEVNSCIKMVYDMYSTFGFEKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVL 452
           +VKLSTRPEKR+GSD LW  AE+ +   L
Sbjct: 417 VVKLSTRPEKRIGSDDLWTRAEDDLAAAL 445


>gi|312794079|ref|YP_004027002.1| threonyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii
           177R1B]
 gi|312181219|gb|ADQ41389.1| threonyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii
           177R1B]
          Length = 647

 Score =  459 bits (1182), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 245/627 (39%), Positives = 375/627 (59%), Gaps = 21/627 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I +T PD  +       +  +  ++IS  L K+AVA  I+G + DL   + R+ S E++T
Sbjct: 4   IAVTLPDRKVVEAEKGISALEFIKTISMKLYKEAVACKIDGVLKDLWTSLERDCSFEVVT 63

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
                   V  H+ +HI+A+AV+ ++ + V++ IGP I++GFYYDFD E+  + + L +I
Sbjct: 64  FSSDEGKKVYWHTTSHILAQAVKRLFGDKVKLGIGPAIDNGFYYDFDVEESITMELLEKI 123

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E++MQ+II  D    +  LS ++A +L + K E YKVE++  IP  E ++ YRQGE+ DL
Sbjct: 124 EEEMQKIIKEDLKIERFELSRKEAVKLMQEKGENYKVELINDIPEGETISFYRQGEFVDL 183

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPH+ STG+VK F KL+ VAGAYWRG+S   ML RIYG ++  + EL +YL  LEE++
Sbjct: 184 CTGPHLPSTGRVKAF-KLLSVAGAYWRGNSKNKMLQRIYGISFEKKSELDEYLKKLEEAK 242

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVL 300
           KRDH ++ RE+++F  +E  G G+     KG KI Q L  ++   + K  Y    TP + 
Sbjct: 243 KRDHNRIGRELEIFTTSEVVGQGLPLLMPKGAKILQILQRFVEDEEEKRGYLLTKTPYMA 302

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
              L++ SGHWD YR  MF ++  ++ +      AL+PM CP    ++N   +SYR+LP+
Sbjct: 303 KSDLYKISGHWDHYRDGMFVIEEDENEV-----LALRPMTCPFQFLIYNSKQRSYRDLPI 357

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R +E  +++RNE SG +HGL+RVR FT  DAH+ C  +Q+  E   + +LI  I K  G 
Sbjct: 358 RYSETSTLFRNESSGEMHGLIRVRQFTLSDAHIICRPDQVEEEFKGVLDLIQYIMKTLGI 417

Query: 421 EK-IMVKLS----TRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           E  I  + S       EK + +   W+  EN MK +LD +       IN     GE AFY
Sbjct: 418 ENDIWYRFSRWDPNNKEKYIDNPEAWEKTENDMKNILDKLG------INYKEAKGEAAFY 471

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +   K+  G++    T+Q+DF L  RF+  YV+   +K  P++IHR+  G  ER +
Sbjct: 472 GPKLDIQFKNVYGKEDTIITVQIDFALAERFDMTYVDRDGQKKRPIIIHRSSIGCYERTL 531

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE + G  PLWLSP+Q  V  ++ +  EYA+ +A +LK +   +E D+R+ET+ YKI
Sbjct: 532 AMLIEKYNGAFPLWLSPVQIRVIPVSDNFNEYAKNVARILKENGFRVEEDYRSETVGYKI 591

Query: 596 REHSIKKIPIIIICGDKEASERSIGIR 622
           R+  ++KIP ++I G+KE  E ++ +R
Sbjct: 592 RDAQLQKIPYMVIVGEKEQKENTVAVR 618


>gi|169629982|ref|YP_001703631.1| threonyl-tRNA synthetase [Mycobacterium abscessus ATCC 19977]
 gi|238688903|sp|B1MCK6|SYT_MYCA9 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|169241949|emb|CAM62977.1| Threonyl-tRNA synthetase [Mycobacterium abscessus]
          Length = 684

 Score =  459 bits (1182), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 248/632 (39%), Positives = 370/632 (58%), Gaps = 44/632 (6%)

Query: 39  VAVAINGKVCDLS-DPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIG 97
           V V ++G + DLS  P  +  +E +        +VIRHS AH++A+AVQ ++P+ ++ IG
Sbjct: 39  VVVRVDGALKDLSWTPESDTEVEPVAANTEDGRSVIRHSAAHVLAQAVQELFPQAKLGIG 98

Query: 98  PIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQ-YLSHEKAR--------- 147
           P I DGFYYDF  +  F+ ++L  +EKKM++II     F ++ Y S E+A+         
Sbjct: 99  PPITDGFYYDFGIDHAFTPEDLTALEKKMKQIIKEGQRFSRRVYESVEEAQAELANEPFK 158

Query: 148 -ELFESKKEAYKVEILE----SIPAKENVTLYRQGE--WFDLCRGPHVRSTGQVKKFFKL 200
            EL   K  A   E++E     + A +N+   R GE  WFDLCRGPH+ +T  +  F +L
Sbjct: 159 LELVSDKSGADDPEVMEVGGDELSAYDNLNP-RTGEREWFDLCRGPHIPTTKHIPAF-RL 216

Query: 201 MKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAE 260
            + + AYWRG+     + R+YGTAW +Q+ L ++L  LEE+++RDHRKL  E+DLF   +
Sbjct: 217 TRSSAAYWRGNQANASMQRVYGTAWESQEALDKHLELLEEAQRRDHRKLGVELDLFSFPD 276

Query: 261 D-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANM 318
           + GSG+  +H KG  + + L  Y R K     YE +NTP +  ++L+Q SGH D Y   M
Sbjct: 277 EIGSGLPVFHPKGGIVRKELEDYSRAKHTAAGYEFVNTPHITKENLYQTSGHLDWYSDGM 336

Query: 319 F------AVKCADDTI-KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRN 371
           F      A    D T+ K  + + LKPMNCP H  ++    +SYRELP+RL EFGSVYR 
Sbjct: 337 FPPMHIDAELNEDGTVRKPGQNYYLKPMNCPMHHLIYRARGRSYRELPLRLFEFGSVYRY 396

Query: 372 EPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP 431
           E SG +HGL RVRG TQDDAH++ T+EQM  E   +   ++ +  D+G +   ++LST+ 
Sbjct: 397 EKSGVVHGLTRVRGMTQDDAHIYTTREQMHEELTSLLRFVLDLLSDYGLDDFYLELSTKD 456

Query: 432 E-KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL----GEGAFYGPKFEYILKDA 486
           E K VGSD +W++A   ++ V           +++G+ L    G  AFYGPK     KDA
Sbjct: 457 EAKFVGSDEVWEEATKTLEQVA----------LDSGLQLVPDPGGAAFYGPKISVQAKDA 506

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNL 546
           +GR WQ  TIQ+DFN+P RFN  Y  +   +  PV+IHRA+FGSIERF G++ E++ G  
Sbjct: 507 LGRSWQMSTIQLDFNMPERFNLEYTAADGTRKQPVLIHRALFGSIERFFGVLTEHYAGAF 566

Query: 547 PLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPII 606
           P WLSP+QA+   I  +   Y  +I + LK+  +  E D  ++ +N KI  H+ +++P +
Sbjct: 567 PAWLSPVQAVGIPIADAHAPYLNDIVSQLKAQGIRAEVDSSDDRMNKKIVNHTNQRVPFL 626

Query: 607 IICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           ++ GD++    ++  R    T    V   +A+
Sbjct: 627 LLAGDRDVEAGAVSFRFRDRTQVNGVPRDEAV 658


>gi|111023830|ref|YP_706802.1| threonyl-tRNA synthetase [Rhodococcus jostii RHA1]
 gi|123339593|sp|Q0S1E2|SYT_RHOSR RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|110823360|gb|ABG98644.1| threonine--tRNA ligase [Rhodococcus jostii RHA1]
          Length = 685

 Score =  459 bits (1182), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 251/653 (38%), Positives = 381/653 (58%), Gaps = 40/653 (6%)

Query: 22  TGSDVAESISRSLAKKAVAVA--INGKVCDLS-DPVREGSIEIITPEDPRSLAVIRHSCA 78
            G+ V E+   S     V V     G++ DLS  P  +  +E +        +VIRHS A
Sbjct: 21  AGTAVREAGYPSKGPDVVVVVRDAEGQLKDLSWVPDTDVEVEPVAANTDDGRSVIRHSAA 80

Query: 79  HIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLK 138
           H++A+AVQ  +PE ++ IGP I+DGFYYDF  ++PF+ ++LA +EK+M++II     F +
Sbjct: 81  HVLAQAVQQEFPEAKLGIGPPIKDGFYYDFAVDRPFTPEDLASLEKRMKKIIKGSQRFSR 140

Query: 139 QYL-SHEKARELFESKKEAYKVEILESIPAKEN----------VTLY-----RQGE--WF 180
           + + S E AR   E  KE +K+E+++     ++          +T+Y     R GE  W 
Sbjct: 141 RVVESLEDARA--ELAKEPFKLELIDDKSGIDDPEIMEVGGNELTIYDNLDPRTGEKVWG 198

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ +T  +  F KL + + AYWRG+ +   L RIYGTAW + +   Q+L  L E
Sbjct: 199 DLCRGPHIPTTKHIPAF-KLTRSSAAYWRGNQDNADLQRIYGTAWESAEAQDQHLELLAE 257

Query: 241 SEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQ 298
           +E+RDHRKL  E+DLF   ++ GSG+  +H +G  I   +  Y R R +++ YE +NTP 
Sbjct: 258 AERRDHRKLGSELDLFSFPDELGSGLPVFHPRGGIIRTEMEDYSRKRHVEEGYEFVNTPH 317

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT-------FALKPMNCPGHVAVFNHG 351
           +   HL++ SGH D YR  MF     D+ + +  T       + LKPMNCP H  +F   
Sbjct: 318 ITKGHLYEVSGHLDWYRDGMFPAMHIDEELNEDGTVRKPGQDYYLKPMNCPMHNLIFRSR 377

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI 411
            +SYRELP+RL EFGSVYR E SG +HGL RVRG TQDDAH++CT+EQM +E       +
Sbjct: 378 GRSYRELPLRLFEFGSVYRYEKSGVVHGLTRVRGMTQDDAHIYCTREQMRDELATTLQFV 437

Query: 412 ISIYKDFGFEKIMVKLSTR-PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
           + + KD+G +   ++LST+ P+K VG DA+W++A   +  V ++        +N     G
Sbjct: 438 LGLLKDYGLDDFYLELSTKNPDKFVGDDAVWEEATATLAEVAES------SGLNLVPDPG 491

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
             AFYGPK    ++DA+GR WQ  TIQ+DFNLP RF+  Y  +   K  PVMIHRA+FGS
Sbjct: 492 GAAFYGPKISVQVQDALGRTWQMSTIQLDFNLPERFDLEYTANDGTKQRPVMIHRALFGS 551

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
           IERF G++ E++ G  P WL+P+Q +   +  +  ++  ++   LK+  +  E D  ++ 
Sbjct: 552 IERFFGVLTEHYAGAFPAWLAPVQVVGIPVAETFADHLFDVVKRLKAAGVRAEVDASDDR 611

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  KI  ++ +K+P +++ G ++    ++  R    T    V + DA+ I+T+
Sbjct: 612 MQKKIFNNTAQKVPFMLLAGARDVEAGAVSFRFRDGTQVNGVPVDDAVRIVTE 664


>gi|312876378|ref|ZP_07736363.1| threonyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
 gi|311796872|gb|EFR13216.1| threonyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
          Length = 647

 Score =  459 bits (1181), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 245/627 (39%), Positives = 375/627 (59%), Gaps = 21/627 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I +T  DG +       +  +  ++IS  L K+AVA  I+G + DL   + R+ S E++T
Sbjct: 4   IAVTLLDGKVVKAEKGISALEFIKTISMKLYKEAVACKIDGVLKDLWTSLERDCSFEVVT 63

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
                   V  H+ +HI+A+AV+ ++ + V++ IGP I++GFYYDFD E+  + + L +I
Sbjct: 64  FSSDEGKKVYWHTTSHILAQAVKRLFGDKVKLGIGPAIDNGFYYDFDVEESITMELLEKI 123

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E++MQ+II  D    +  LS E++ +L + K E YKVE++  IP  E ++ YRQGE+ DL
Sbjct: 124 EEEMQKIIKEDLKIERFELSREESVKLMQEKGENYKVELINDIPEGETISFYRQGEFVDL 183

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPH+ STG+VK F KL+ VAGAYWRG+S   ML RIYG ++  + EL +YL  LEE++
Sbjct: 184 CTGPHLPSTGRVKAF-KLLSVAGAYWRGNSKNKMLQRIYGISFEKKSELDEYLKKLEEAK 242

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVL 300
           KRDH ++ RE+++F  +E  G G+     KG KI Q L  ++   + K  Y    TP + 
Sbjct: 243 KRDHNRIGRELEIFTTSEVVGQGLPLLMPKGAKILQILQRFVEDEEEKRGYLLTKTPYMA 302

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
              L++ SGHWD YR  MF ++  ++ +      AL+PM CP    ++N   +SYR+LP+
Sbjct: 303 KSDLYKISGHWDHYRDGMFVIEEDENEV-----LALRPMTCPFQFLIYNSKQRSYRDLPI 357

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R +E  +++RNE SG +HGL+RVR FT  DAH+ C  +Q+  E   + +LI  I K  G 
Sbjct: 358 RYSETSTLFRNESSGEMHGLIRVRQFTLSDAHIICRPDQVEEEFKGVLDLIQYIMKTLGI 417

Query: 421 EK-IMVKLS----TRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           E  I  + S       EK + +   W+  EN MK +LD +       IN     GE AFY
Sbjct: 418 ENDIWYRFSRWDPNNKEKYIDNPEAWEKTENDMKNILDKLG------INYKEAKGEAAFY 471

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +   K+  G++    T+Q+DF L  RF+  YV+   +K  P++IHR+  G  ER +
Sbjct: 472 GPKLDIQFKNVYGKEDTIITVQIDFALAERFDMTYVDRDGQKKRPIIIHRSSIGCYERTL 531

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE + G  PLWLSP+Q  V  ++ +  EYA+ +A +LK +   +E D+R+ET+ YKI
Sbjct: 532 AMLIEKYNGAFPLWLSPVQIRVIPVSDNFNEYAKNVARILKENGFRVEEDYRSETVGYKI 591

Query: 596 REHSIKKIPIIIICGDKEASERSIGIR 622
           R+  ++KIP ++I G+KE  E ++ +R
Sbjct: 592 RDAQLQKIPYMVIVGEKEQKENTVAVR 618


>gi|76801848|ref|YP_326856.1| threonyl-tRNA synthetase [Natronomonas pharaonis DSM 2160]
 gi|121731906|sp|Q3IRE7|SYT_NATPD RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|76557713|emb|CAI49296.1| threonine--tRNA ligase [Natronomonas pharaonis DSM 2160]
          Length = 642

 Score =  459 bits (1180), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 245/629 (38%), Positives = 374/629 (59%), Gaps = 27/629 (4%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           S+I +T PDGS       +T  DVA  I   L    VA  ++G++ D ++ + +   + I
Sbjct: 2   SEIVVTLPDGSELEMESGSTVEDVAYEIGPGLGDDTVAGVVDGELVDKAEQLTDDCELVI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +T +    L V+RHS AH+ A+A+Q + PE ++AIGP  E+GFYYD        +D+L  
Sbjct: 62  VTDQSDEYLQVLRHSAAHVFAQALQRLHPEAKLAIGPPTEEGFYYDV-TGVDLDADDLEA 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWF 180
           IE +M+ II  D    +   S E+A E++E     YK +ILE+  A E+ V+ Y Q +W 
Sbjct: 121 IEAEMETIIEADHDIERAERSREEAFEIYEDN--PYKRDILETEAADEDPVSFYTQDDWQ 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLC+GPHV STG++    +L+ +A AYWRGD +   L+R+YGTA+ ++ +L  +L   EE
Sbjct: 179 DLCQGPHVDSTGEIGAV-ELLNIAAAYWRGDEDNETLTRVYGTAFESESDLEGFLQRREE 237

Query: 241 SEKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRRKIKDD--YEEINTP 297
           ++KRDHRKL +E+DLF I +  G G+  +H  G  + + L  ++  ++ DD  YE + TP
Sbjct: 238 AKKRDHRKLGQELDLFSIPDVTGPGLPLYHPNGKAVLRELEDFVD-QLNDDQGYEFVETP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW+QSGH+++Y  +MF +   D+       + LKPMNCPGH  +FN G  SYR+
Sbjct: 297 HLFRTELWKQSGHYENYVDDMFLLDVNDEE------YGLKPMNCPGHATIFNQGNWSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LPVR AE G VYR E  G L GL RV  FT DD H+F  ++ +  E   I + I  +   
Sbjct: 351 LPVRYAENGKVYRKEQRGELSGLSRVWAFTIDDGHLFVERDAIEQEVNVIMDQIEEVLDT 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           F  +   V L+TRPEK VGSD +W+ A+  ++ VL++        ++  +  G+GAFYGP
Sbjct: 411 FDLD-YEVALATRPEKSVGSDEIWEQAQTQLRSVLESSG------MDYDIESGDGAFYGP 463

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K ++  +DA+GR+W   T+Q+DFN+P RF+  Y    +E+  PVMIHRA++GS ERF  +
Sbjct: 464 KIDFAFEDALGRNWDGPTVQLDFNMPERFDLTYTGEDNEEHRPVMIHRALYGSYERFFMV 523

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIAN-LLKSHHLSIETDFRNETINYKIR 596
           +IE+F GN P WL+P Q  +  ++   + YA+++ N  L    + IE   R+ T+  KI+
Sbjct: 524 LIEHFDGNFPTWLAPEQVRILPVSDDNIGYAKQLKNRYLDDFRVEIED--RSWTVGKKIQ 581

Query: 597 EHSIKKIPIIIICGDKEASERSIGIR-RF 624
                ++P +++ GD E    ++ +R RF
Sbjct: 582 TAHDDRVPYMLVVGDNEEEAGTVSVRDRF 610


>gi|291515296|emb|CBK64506.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Alistipes shahii
           WAL 8301]
          Length = 604

 Score =  459 bits (1180), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 237/607 (39%), Positives = 365/607 (60%), Gaps = 21/607 (3%)

Query: 50  LSDPVRE-GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF 108
           ++ P+ E  S++    +D        H+ +H++AEA+++++P ++  IGP IE+GFYYD 
Sbjct: 1   MTRPIEEDASVKFYKWDDEEGKHAFWHTSSHLLAEALEALYPGIKFGIGPAIENGFYYDV 60

Query: 109 DKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK 168
           D   P +  +L  IE KM E+       L++ +   +A + F  K + YKVE++  +   
Sbjct: 61  DSPTPITEADLPTIENKMVELSRNKEALLRREVPKAEALKTFTEKGDQYKVELITDL-ED 119

Query: 169 ENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQ 228
             ++ Y  G + DLCRGPH+ +TG +K   KL  VAGAYWRG+    ML+RIYG ++  +
Sbjct: 120 GTISFYTNGAFTDLCRGPHIPNTGYIKAL-KLTSVAGAYWRGNEKNKMLTRIYGISFPKK 178

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKI 287
             L +YL  +EE++KRDHRKL ++++LF  ++  G G+  W  KG  +   L  ++R   
Sbjct: 179 SMLDEYLAMMEEAKKRDHRKLGKDLELFTFSQRVGQGLPLWLPKGAALRDRLEQFLRGVQ 238

Query: 288 KD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA 346
           K+  Y+++ TP + ++ L+  SGH+  Y  + F       T  +   + LKPMNCP H  
Sbjct: 239 KEYGYQQVITPHIGNKELYVTSGHYAKYGKDSFQ---PIHTPIEGEEYLLKPMNCPHHCE 295

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           ++    +SY+ELPVRLAEFG+VYR E SG LHGL RVRGFTQDDAH+F   +Q+  E  +
Sbjct: 296 IYRSKPRSYKELPVRLAEFGTVYRYEQSGELHGLTRVRGFTQDDAHLFVRPDQLLEEFER 355

Query: 407 IHNLIISIYKDFGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
           + ++++ I+K   F+    ++S R     EK +GSD  W+ AE+ +      ++ + +  
Sbjct: 356 VIDIVLYIFKTLKFDNYTAQISLRDPNNKEKYIGSDENWEKAESAI------MQAAKEKG 409

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
           + T V LGE AFYGPK ++++KDAIGR WQ GTIQVD+NLP RF+  Y  +      P+M
Sbjct: 410 LTTVVELGEAAFYGPKLDFMVKDAIGRKWQLGTIQVDYNLPERFDLTYKGADDRLHRPIM 469

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSI 582
           IHRA FGS+ERF+ +++E+  G  PLWLSP Q +V  I+    +YAQ+++  L    +  
Sbjct: 470 IHRAPFGSMERFVAVLLEHTGGKFPLWLSPQQVVVLPISEKFNDYAQKVSEFLNRSDVRT 529

Query: 583 ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL---LDAIP 639
           E D RNE I  KIR++ +K+IP ++I G+KE +E  + +R  G     ++SL    D I 
Sbjct: 530 EVDDRNEKIGRKIRDNELKRIPYLLIVGEKEEAEGLVSVRAQGEGDKGQMSLEAFRDFIA 589

Query: 640 ILTKESL 646
            L KE +
Sbjct: 590 GLVKEEI 596


>gi|15827147|ref|NP_301410.1| threonyl-tRNA synthetase [Mycobacterium leprae TN]
 gi|221229625|ref|YP_002503041.1| threonyl-tRNA synthetase [Mycobacterium leprae Br4923]
 gi|2501058|sp|O07151|SYT_MYCLE RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|254783529|sp|B8ZUG9|SYT_MYCLB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|2193902|emb|CAB09620.1| ThrS [Mycobacterium leprae]
 gi|13092695|emb|CAC29964.1| threonyl-tRNA synthetase [Mycobacterium leprae]
 gi|219932732|emb|CAR70549.1| threonyl-tRNA synthetase [Mycobacterium leprae Br4923]
          Length = 702

 Score =  459 bits (1180), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 261/644 (40%), Positives = 384/644 (59%), Gaps = 50/644 (7%)

Query: 22  TGSDVAESISRSL-----AKKAVAVA--INGKVCDLSDPVREGSIEI----ITPEDPRSL 70
            GS  A ++S +      A  A+ V    +GK+ DLS  V +  +E+    +  +D RS 
Sbjct: 35  AGSTAAAAVSEAGLPTHGAPDAIVVVRDADGKLRDLSW-VPDVDVEVTPVPVNTDDGRS- 92

Query: 71  AVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEII 130
            VIRHS AH++A+AVQ ++P+ ++ IGP I DGFYYDFD  +PF+ ++L  +EK+M++I+
Sbjct: 93  -VIRHSTAHVLAQAVQDLFPQAKLGIGPPITDGFYYDFDVAEPFTPEDLKALEKRMRQIV 151

Query: 131 ARDSPFLKQ-YLSHEKARELFESKKEAYKVEIL--ESIPAK------ENVTLY-----RQ 176
                F ++ Y S E+AR   E   E YK+E++  ES  A+      + +T Y     R 
Sbjct: 152 KEGQLFSRRIYESKEQART--EWAGEPYKLELVDDESGDAEIMEVGGDELTAYDNLNARN 209

Query: 177 GE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
           GE  W DLCRGPH+ +T  +  F KL + + AYWRG+     L RIYGTAW +Q+ L ++
Sbjct: 210 GERIWGDLCRGPHIPTTKHIPAF-KLTRSSAAYWRGNQKNASLQRIYGTAWESQEALDRH 268

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYE 292
           L  + E+++RDHRKL  E+DLF   ++ GSG+  +H KG  + + +  Y RRK I+  Y+
Sbjct: 269 LEMITEAQRRDHRKLGIELDLFSFPDEIGSGLAIFHPKGSIVRREMEEYSRRKHIEAGYQ 328

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMF------AVKCADDTI-KDLRTFALKPMNCPGHV 345
            +NTP +    L+  SGH D Y   +F      A    D T+ K  + + LKPMNCP H 
Sbjct: 329 FVNTPHITKAQLFHTSGHLDWYAEGIFPPMHLDAEHNDDGTVRKPGQDYYLKPMNCPMHT 388

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +F+   +SYRELP+RL EFG++YR E SG +HGL R RGFT DD+H+FCT+EQ+  E  
Sbjct: 389 LIFSSRGRSYRELPLRLFEFGTIYRYEKSGVVHGLTRARGFTMDDSHIFCTREQLHCELA 448

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTR-PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            +   ++ +  D+G E   ++LST+ PEK VGS+ +W++A   +  V +   NS+   + 
Sbjct: 449 SLLRFVLDLLGDYGLEDFYLELSTKDPEKFVGSEEIWEEATAALAEVAE---NSTLPLVP 505

Query: 465 TGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIH 524
                G  AFYGPK    ++DA+GR WQ  TIQVDFN P RF   Y ++   +  PVMIH
Sbjct: 506 DP---GGAAFYGPKISVQVRDALGRSWQMSTIQVDFNFPERFALEYTSADGTRQRPVMIH 562

Query: 525 RAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIET 584
           RA+FGSIERF GI+ E++ G  P WL+PIQ +   +T   V Y +E+A  LKS  +  E 
Sbjct: 563 RALFGSIERFFGILTEHYAGAFPAWLAPIQVVGIPVTGEHVSYLEEVAAQLKSCGVRTEV 622

Query: 585 DFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
           D  ++ +  KI  H+ +K+P +++ GD++    S+   RFG  T
Sbjct: 623 DVSDDRMAKKIVRHTNQKVPFMLLAGDRDVRTGSVSF-RFGDRT 665


>gi|226366266|ref|YP_002784049.1| threonyl-tRNA synthetase [Rhodococcus opacus B4]
 gi|254783533|sp|C1B4B5|SYT_RHOOB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|226244756|dbj|BAH55104.1| threonyl-tRNA synthetase [Rhodococcus opacus B4]
          Length = 685

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 251/652 (38%), Positives = 379/652 (58%), Gaps = 40/652 (6%)

Query: 22  TGSDVAESISRSLAKKAVAVA--INGKVCDLS-DPVREGSIEIITPEDPRSLAVIRHSCA 78
            G+ V E+   S     V V     G + DLS  P  +  +E +        +VIRHS A
Sbjct: 21  AGTAVREAGYPSKGPDVVVVVRDAEGGLRDLSWVPDADVDVEPVAANTDDGRSVIRHSAA 80

Query: 79  HIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLK 138
           H++A+AVQ  +PE ++ IGP I+DGFYYDF  E+PF+ ++LA +EK+M++I+     F +
Sbjct: 81  HVLAQAVQQEFPEAKLGIGPPIKDGFYYDFAVERPFTPEDLANLEKRMKKIVKGSQRFSR 140

Query: 139 QYL-SHEKARELFESKKEAYKVEILESIPAKEN----------VTLY-----RQGE--WF 180
           + + S E+AR   E   E +K+E+++     ++          +T+Y     R GE  W 
Sbjct: 141 RVVDSLEEARA--ELANEPFKLELIDDKSGIDDPEIMEVGGNELTIYDNLDPRTGEKVWG 198

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ +T  +  F KL + + AYWRG+ +   L RIYGTAW + +   Q+L  L E
Sbjct: 199 DLCRGPHIPTTKHIPAF-KLTRSSAAYWRGNQDNADLQRIYGTAWESAEAQEQHLELLAE 257

Query: 241 SEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQ 298
           +E+RDHRKL  E+DLF   ++ GSG+  +H +G  I   +  Y R R +++ YE +NTP 
Sbjct: 258 AERRDHRKLGSELDLFSFPDELGSGLPVFHPRGGIIRTEMEDYSRKRHVEEGYEFVNTPH 317

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT-------FALKPMNCPGHVAVFNHG 351
           +   HL++ SGH D YR  MF     D+ + +  T       + LKPMNCP H  +F   
Sbjct: 318 ITKGHLYEVSGHLDWYRDGMFPAMHIDEELNEDGTVRKPGQDYYLKPMNCPMHNLIFRSR 377

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI 411
            +SYRELP+RL EFGSVYR E SG +HGL RVRG TQDDAH++CT+EQM +E       +
Sbjct: 378 GRSYRELPLRLFEFGSVYRYEKSGVVHGLTRVRGMTQDDAHIYCTREQMRDELATTLQFV 437

Query: 412 ISIYKDFGFEKIMVKLSTR-PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
           + + KD+G +   ++LST+ P+K VG DA+W++A   +  V ++        +N     G
Sbjct: 438 LGLLKDYGLDDFYLELSTKNPDKFVGDDAVWEEATATLAEVAES------SGLNLVPDPG 491

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
             AFYGPK    ++DA+GR WQ  TIQ+DFNLP RF+  Y  S   K  PVMIHRA+FGS
Sbjct: 492 GAAFYGPKISVQVQDALGRTWQMSTIQLDFNLPERFDLEYTASDGTKKRPVMIHRALFGS 551

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
           IERF G++ E++ G  P WL+P+Q +   +  +  ++  ++   LK+  +  E D  ++ 
Sbjct: 552 IERFFGVLTEHYAGAFPAWLAPVQVVGIPVAETFADHLFDVVKRLKAAGVRAEVDASDDR 611

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +  KI  ++ +K+P +++ G ++    ++  R    T    V + DA+ I+T
Sbjct: 612 MQKKIFNNTAQKVPFMLLAGARDVEAGAVSFRFRDGTQVNGVPVDDAVRIVT 663


>gi|317008795|gb|ADU79375.1| threonyl-tRNA synthetase [Helicobacter pylori India7]
          Length = 612

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 238/591 (40%), Positives = 360/591 (60%), Gaps = 37/591 (6%)

Query: 44  NGKVCDLSDPVR--EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE 101
           + KV  LSD ++  +G+  I   + P +L VIRHSCAH++A+++++++P+ +  +GP++E
Sbjct: 19  SAKVLGLSDGIKALKGTEPIYFDDSPLALEVIRHSCAHLLAQSLKALYPDAKFFVGPVVE 78

Query: 102 DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEI 161
           +GFYYDF      S ++L +IE KM+E         K+ L+ E+A E F  K +  K  +
Sbjct: 79  EGFYYDFKTASKISEEDLPKIEAKMKEFAKSKLAITKEVLTREQALERF--KGDELKHAV 136

Query: 162 LESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIY 221
           +  I   +   +Y+QGE+ DLC+GPH+ +T +    FKL K+AGAY  GD N  ML RIY
Sbjct: 137 MSKISG-DKFGVYQQGEFEDLCKGPHLPNT-RFLNHFKLTKLAGAYLGGDENNEMLIRIY 194

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLI 280
           G A+ T++ L  YL+ +EE++KRDHRKL  E+ LF   ++ G+G+  W  KG +      
Sbjct: 195 GIAFATKEGLKDYLFQIEEAKKRDHRKLGVELGLFSFDDEIGAGLPLWLPKGAR------ 248

Query: 281 SYMRRKIKD---------DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
             +R++I+D          YE +  P++L   +W+ SGH+D+Y+ NM+       T  D 
Sbjct: 249 --LRKRIEDLLSKALLLRGYEPVKGPEILKSDVWKISGHYDNYKENMYF------TTIDE 300

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
           + + +KPMNC GH+ V+   L SYR+LP+R  E+G V+R+E SG LHGL+RVR FTQDDA
Sbjct: 301 QEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDA 360

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
           H+FC+ EQ+ +E   I +    I + FGF   M +LSTRP K +G D +W+ A N +K  
Sbjct: 361 HIFCSFEQIQSEVSTILDFTHKIMQAFGFSYEM-ELSTRPAKSIGDDKVWEKATNALKEA 419

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
           L       + RI+  +  G GAFYGPK +  + DA+ R WQCGTIQVD NLP RF   + 
Sbjct: 420 L------KEHRIDYKIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDMNLPERFKLAFT 473

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
           N ++    PVMIHRA+ GS ERFI I+ E+F GN P +++P Q  +  I      +A ++
Sbjct: 474 NEYNHAEQPVMIHRAILGSFERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHVFAFKL 533

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
              LK H + +E   +N+++N K+R    +KIP+I++ G++E     + IR
Sbjct: 534 KEALKKHDIFVEVLDKNDSLNKKVRSAEKQKIPMILVLGNEEVESEILSIR 584


>gi|315444753|ref|YP_004077632.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Mycobacterium
           sp. Spyr1]
 gi|315263056|gb|ADT99797.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Mycobacterium
           sp. Spyr1]
          Length = 695

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 251/632 (39%), Positives = 377/632 (59%), Gaps = 55/632 (8%)

Query: 35  AKKAVAVA--INGKVCDLSDPVREGSIEIITP-----EDPRSLAVIRHSCAHIMAEAVQS 87
           A  AV V    +G++ DLS  V +  +E+ TP     ED RS  VIRHS AH++A+AVQ 
Sbjct: 35  APDAVVVVRDADGRLRDLS-WVPDTDVEV-TPVAADTEDGRS--VIRHSAAHVLAQAVQE 90

Query: 88  IWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKAR 147
           ++P+ ++ IGP I DGFYYDFD  +PF+ + L  +EKKM++I+ +D    ++ +   K  
Sbjct: 91  MFPDAKLGIGPPITDGFYYDFDVAEPFTPEHLQALEKKMRKIV-KDGQIFERRVFGSKDE 149

Query: 148 ELFESKKEAYKVEILESIPAKEN----------VTLY-------RQGEWFDLCRGPHVRS 190
              E   E YK+E+++     E+          +T Y       R+  W DLCRGPH+ +
Sbjct: 150 ARAELASEPYKLELIDDKSGAEDPEVMEVGGDELTAYDNLNPRTRERVWGDLCRGPHIPT 209

Query: 191 TGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLA 250
           T  +  F  L + + AYWRGD N   L RIYGTAW +Q+ L ++L  +EE+++RDHRKL 
Sbjct: 210 TRYIPAF-TLTRSSAAYWRGDQNNASLQRIYGTAWESQEALDRHLELIEEAQRRDHRKLG 268

Query: 251 REMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQS 308
            E+DLF   ++ GSG+  +H KG  + + L  Y RRK I+  YE +NTP +  + L+  S
Sbjct: 269 VELDLFSFPDELGSGLPVFHPKGGVVRRELEEYSRRKHIEAGYEFVNTPHITKEQLYITS 328

Query: 309 GHWDSYRANMF------AVKCADDTI-KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           GH + Y   MF      A    D T+ K  + + LKPMNCP H  ++    +SYRELP+R
Sbjct: 329 GHLEWYADGMFPPMQIDAEYNEDGTVRKPGQDYYLKPMNCPMHHLIYRSRGRSYRELPLR 388

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           L EFGSVYR E SG +HGL RVRG TQDDAH++CT+E+M +E  ++   ++ +  D+G +
Sbjct: 389 LFEFGSVYRYEKSGVIHGLTRVRGMTQDDAHIYCTREEMRDELARLLQFVLDLLADYGLD 448

Query: 422 KIMVKLSTR-PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL----GEGAFYG 476
              ++LST+ P+K VGSD LW++A   ++ V ++          +G+ L    G  AFYG
Sbjct: 449 DFYLELSTKDPDKFVGSDDLWEEATETLREVAES----------SGLALVPDPGGAAFYG 498

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK    ++DA+GR+WQ  TIQ+DFN+P RF   Y +S   +  PV+IHRA+FGSIERF G
Sbjct: 499 PKISVQVRDALGRNWQMSTIQLDFNMPDRFELEYTSSDGTRRRPVLIHRALFGSIERFFG 558

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           ++ E++ G  P+WL+P+Q +   +  +   Y   +A  L+   + +E D  ++ +  KI 
Sbjct: 559 VLTEHYAGAFPVWLAPVQVVGIPVAVAHAGYLDGVAAELRRRGIRVEVDASDDRMAKKIV 618

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
            H+ +K+P +++ GDK+    ++   RFG  T
Sbjct: 619 NHTNQKVPFMLLAGDKDVEAGAVSF-RFGDRT 649


>gi|300781050|ref|ZP_07090904.1| threonine--tRNA ligase [Corynebacterium genitalium ATCC 33030]
 gi|300532757|gb|EFK53818.1| threonine--tRNA ligase [Corynebacterium genitalium ATCC 33030]
          Length = 701

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 235/603 (38%), Positives = 356/603 (59%), Gaps = 39/603 (6%)

Query: 71  AVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEII 130
           +VIRHSCAH++A+AVQ  +P+ ++ IGP I DGFYYDFD ++PF+ ++L  +EK+M++II
Sbjct: 88  SVIRHSCAHVLAQAVQEEFPDAKLGIGPAINDGFYYDFDVKEPFTPEDLKTLEKRMKKII 147

Query: 131 ARDSPFLKQ-YLSHEKARELFESKKEAYKVEILESI----PAKENVTLYRQGE------- 178
            +   F++  Y S E+A E  + K E YK+E+++      P  +  T    G+       
Sbjct: 148 KQGQKFVRGVYASTEEAAE--DLKNEPYKLELIQDKGSVDPNSDEATEVGAGDLTHYDNV 205

Query: 179 --------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQE 230
                   W DLCRGPHV +T  +  F  L + + AYWRGD +   L RIYGTAW T+++
Sbjct: 206 NPRTDEVVWHDLCRGPHVPTTKYIPAF-ALTRSSAAYWRGDQSNAGLQRIYGTAWETKEK 264

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIK 288
           L +Y + LEE+EKRDHR+L  EMDLF   ++ GSG+  +H  G  +   + ++ R R ++
Sbjct: 265 LEEYQHMLEEAEKRDHRRLGAEMDLFSFPDEVGSGLPVFHPDGGIVRMEMENHSRKRHLE 324

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD-------DTIKDLRTFALKPMNC 341
             Y  +NTP V    L+QQSGH D Y   MF     D       + +K    +  KPMNC
Sbjct: 325 AGYSFVNTPHVTKGDLFQQSGHLDWYADGMFPPMQLDGEWDEDGNCVKQPVDYYAKPMNC 384

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
           P H  +F+   +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDDAH++CT++Q+ 
Sbjct: 385 PFHNLIFDSRGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYCTEDQLE 444

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTR-PEKRVGSDALWDDAENIMKGVLDTIKNSSQ 460
            E   +   IIS+ +D+G +   ++LST+ PEK +G D +W+ + NI++ V      +++
Sbjct: 445 QELTDVLEFIISLLQDYGLDDFYLELSTKDPEKYIGDDDIWERSTNILESV------ATR 498

Query: 461 DRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHP 520
             +         AFYGPK     +DAIGR WQ  T+Q+DFNLP RFN  Y +S   K  P
Sbjct: 499 SGLELVPDPAGAAFYGPKISVQARDAIGRTWQMSTVQLDFNLPDRFNLEYTSSDGTKQRP 558

Query: 521 VMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHL 580
           VMIHRA+FGSIERF G+++E++ G  P WL+P Q +   +      +   + + L+   +
Sbjct: 559 VMIHRALFGSIERFFGVLLEHYAGAFPAWLAPRQVVGIPVADEFAPHLDAVTDKLRKRGI 618

Query: 581 SIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
               D  ++ +  KIR H+  K+P +++ G ++    ++  R    +    V + +AI +
Sbjct: 619 RASVDHSDDRMQKKIRNHTTGKVPFMLLAGARDVEADAVSFRFLDGSQVNGVPVDEAIEL 678

Query: 641 LTK 643
           +++
Sbjct: 679 ISQ 681


>gi|120403545|ref|YP_953374.1| threonyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1]
 gi|166225469|sp|A1T868|SYT_MYCVP RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|119956363|gb|ABM13368.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Mycobacterium
           vanbaalenii PYR-1]
          Length = 691

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 243/623 (39%), Positives = 373/623 (59%), Gaps = 55/623 (8%)

Query: 44  NGKVCDLSDPVREGSIEII----TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPI 99
           +G++ DLS  V +  +++I      ED RS  VIRHS AH++A+AVQ+++P+ ++ IGP 
Sbjct: 46  DGRLRDLS-WVPDADVDVIPVTADTEDGRS--VIRHSAAHVLAQAVQALFPDAKLGIGPP 102

Query: 100 IEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQ-YLSHEKARELFESKKEAYK 158
           I DGFYYDF+  +PF+ ++L  +EK+M++I+     F ++ + S ++ARE  E   E YK
Sbjct: 103 ITDGFYYDFEVAEPFTPEDLEALEKRMRQIVKDGQLFSRRVFESKDEARE--ELANEPYK 160

Query: 159 VEILESIPAK------------ENVTLY-------RQGEWFDLCRGPHVRSTGQVKKFFK 199
           +E+++                 + +T Y       R+  W DLCRGPH+ +T  +  F K
Sbjct: 161 LELIDDKSGDLESSDEIMEIGGDELTAYDNLNPRTRERVWGDLCRGPHIPTTRYIPAF-K 219

Query: 200 LMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIA 259
           L + + AYWRGD N   L RIYGTAW +Q+ L ++L  +EE++KRDHRKL  E+DLF   
Sbjct: 220 LTRSSAAYWRGDQNNASLQRIYGTAWESQEALDRHLELIEEAQKRDHRKLGVELDLFSFP 279

Query: 260 ED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRAN 317
           ++ GSG+  +H KG  + + L  Y RRK I+  YE +NTP +  +HL+  SGH + Y   
Sbjct: 280 DELGSGLPVFHPKGGVVRRELEEYSRRKHIEAGYEFVNTPHITKEHLYITSGHLEWYADG 339

Query: 318 MFAVKCADDTIKDLRT-------FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYR 370
           MF     D    D  T       + LKPMNCP H  ++    +SYRELP+RL EFGSVYR
Sbjct: 340 MFPAMHIDAEYNDDGTVRKPGQDYYLKPMNCPMHHLIYRSRGRSYRELPLRLFEFGSVYR 399

Query: 371 NEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR 430
            E SG +HGL RVRG TQDDAH++CT+E+M +E  ++   ++ +  D+G +   ++LST+
Sbjct: 400 YEKSGVVHGLTRVRGMTQDDAHIYCTREEMRDELARLLQFVLDLLADYGLDDFYLELSTK 459

Query: 431 -PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL----GEGAFYGPKFEYILKD 485
            P+K VGSD +W++A   ++ V ++          +G+ L    G  AFYGPK    ++D
Sbjct: 460 DPDKFVGSDDMWEEATETLREVAES----------SGLHLVPDPGGAAFYGPKISVQVRD 509

Query: 486 AIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           A+GR+WQ  TIQ+DFN+P RF   Y  +   +  PV+IHRA+FGSIERF G++ E++ G 
Sbjct: 510 ALGRNWQMSTIQLDFNMPDRFELEYTAADGTRKRPVLIHRALFGSIERFFGVLTEHYAGA 569

Query: 546 LPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPI 605
            P WL+P+Q +   +    + Y   +   L++  +  E D  ++ +  KI  H+ +K+P 
Sbjct: 570 FPAWLAPVQVVGIPVADDHIRYLDGLVAQLRALGIRAEVDTSDDRMAKKIVNHTNQKVPF 629

Query: 606 IIICGDKEASERSIGIRRFGSTT 628
           +++ GD++    ++   RFG  T
Sbjct: 630 MLLAGDRDVEAEAVSF-RFGDRT 651


>gi|269795047|ref|YP_003314502.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Sanguibacter
           keddieii DSM 10542]
 gi|269097232|gb|ACZ21668.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Sanguibacter
           keddieii DSM 10542]
          Length = 676

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 243/629 (38%), Positives = 358/629 (56%), Gaps = 46/629 (7%)

Query: 44  NGKVCDLSDPVREGSI-EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIED 102
            G++ DL+    EG + E +T + P  L V+RHS AH++A+AVQ + P  ++ IGP I D
Sbjct: 47  GGELKDLASTFTEGDVVEPVTIDSPDGLDVLRHSAAHVLAQAVQQVNPTAKLGIGPPITD 106

Query: 103 GFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL 162
           GFYYDFD  +PF+ ++L  +EK M  I+     F ++ ++  +A  L +   E YK+E++
Sbjct: 107 GFYYDFDVAEPFTPEDLKALEKAMMRIVKEGQTFRRRVVTEAEA--LVDLADEPYKIELV 164

Query: 163 ----ESIPAKENVTL-------------YRQGE--WFDLCRGPHVRSTGQVKKFFKLMKV 203
                S  A E  ++              R G+  W DLCRGPH+ ST  +   F+LM+ 
Sbjct: 165 GLKGSSDTAGEGASVEVGAGELSIYQNVRRNGDVAWEDLCRGPHLPSTRLIGNGFQLMRS 224

Query: 204 AGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-G 262
           A AYWRG    P L R+YGTAW T+ EL  +L  L E+E+RDHR+L  E+DLF   ++ G
Sbjct: 225 AAAYWRGSEKNPQLQRVYGTAWPTKDELKAHLERLAEAERRDHRRLGSELDLFSFPDEIG 284

Query: 263 SGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG+  +H KG  I   +  Y R R +++ Y  +NTP +  + L+  SGH D Y   M+  
Sbjct: 285 SGLAVFHPKGGIIRSEMEQYSRKRHVEEGYSFVNTPHITKEQLFLTSGHLDWYADGMYPP 344

Query: 322 KCADDTI-------KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
              D+ +       K  + + LKPMNCP H  +F    +SYRELP+RL EFG+VYR E S
Sbjct: 345 MHLDEEVDADGTVRKAGQNYYLKPMNCPMHNLIFASRGRSYRELPLRLFEFGTVYRYEKS 404

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR-PEK 433
           G +HGL R RGFTQDDAH++CT+EQM +E     N ++ + KD+G +   ++LSTR PEK
Sbjct: 405 GVVHGLARGRGFTQDDAHIYCTREQMKDELTTSLNFVLGLLKDYGLDDFYLELSTRDPEK 464

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL----GEGAFYGPKFEYILKDAIGR 489
            VG+D  W++A   ++ V           + +G+ L    G  AFYGPK     KDAIGR
Sbjct: 465 SVGTDDAWEEATRTLEEVA----------VASGLDLVPDPGGAAFYGPKISVQAKDAIGR 514

Query: 490 DWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW 549
            WQ  TIQ+DFNLP +F+  +  +   +  PVMIHRA+FGSIERF  ++ E++ G  P W
Sbjct: 515 TWQMSTIQLDFNLPEKFDLEFAAADGTRQRPVMIHRALFGSIERFFAVLTEHYAGAFPAW 574

Query: 550 LSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIIC 609
           L+P+Q +   +     +Y  ++   L+   +  + D  ++    KIR  S +KIP ++I 
Sbjct: 575 LAPVQVLAVPVAEPFNDYLADVVAQLRKAGVRADLDDSSDRFAKKIRTASTQKIPFVLIA 634

Query: 610 GDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           G ++A   ++  R         V + +AI
Sbjct: 635 GGEDAEAGAVSFRYRDGRQENGVPVAEAI 663


>gi|291277001|ref|YP_003516773.1| threonyl-tRNA synthetase [Helicobacter mustelae 12198]
 gi|290964195|emb|CBG40041.1| threonyl-tRNA synthetase [Helicobacter mustelae 12198]
          Length = 603

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 231/567 (40%), Positives = 356/567 (62%), Gaps = 19/567 (3%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSD 117
            +EI+      SL++IRHSCAH+MA+A++ ++P+ +  +GP++++GFYYDF      S +
Sbjct: 26  GVEILFDNSQDSLSIIRHSCAHLMAQAIKELYPDAKFFVGPVVDEGFYYDFKTAHKISQE 85

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +LA+IEK+M+EI  R  P +K  ++ ++A E F+   +  K  ++  IP  ++  +Y QG
Sbjct: 86  DLAKIEKQMKEIAKRKLPIIKSTMTRQEALEKFQD--DELKQAVMSKIPG-DDFGVYAQG 142

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           ++ DLCRGPH+ +T +    FKL K+AGAY  GD +  ML+RIYG A+  ++ L  YL+ 
Sbjct: 143 DFEDLCRGPHLPNT-KFLHAFKLTKLAGAYLGGDESAEMLTRIYGIAFADKEMLNAYLHQ 201

Query: 238 LEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEIN 295
           +EE++KRDHRKL  EM LF   E+ G+G+  W   G ++ + +   + + +   DYE + 
Sbjct: 202 IEEAKKRDHRKLGVEMGLFTFDEEVGAGLPIWLPNGARLRRRIEELLTKALMIRDYEPVR 261

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
            P++L   +W+ SGH+D+Y  NM+       T  D   + LKPMNC GH+ V+   ++SY
Sbjct: 262 GPELLKSSVWKTSGHFDNYGENMYF------TTIDEVEYGLKPMNCVGHIKVYQSSVRSY 315

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP+R  E+G V+R+E SG LHGL+RVR FTQDDAH+FC   Q+  E   I      I 
Sbjct: 316 RELPLRFYEYGIVHRHEKSGVLHGLLRVREFTQDDAHIFCRPTQIKTEVSNIIAFTDKIM 375

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           + FGF   M +L+TRP+K +G DA+W+ A    + ++D ++   ++ I+  +  G GAFY
Sbjct: 376 QAFGFCYEM-ELATRPQKSIGQDAVWEVA---TQALIDALQ---ENHIHYKIDEGGGAFY 428

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  + DAIGR WQCGTIQ+D NLP RF   Y++ ++    PVMIHRA+ GS ERF 
Sbjct: 429 GPKIDIKITDAIGRKWQCGTIQIDMNLPERFALEYIDENNTAQQPVMIHRAILGSFERFS 488

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            I+ E+F G  P +++P+Q ++  IT S  +YAQ +   + +     E   +NET+N KI
Sbjct: 489 AILTEHFGGEFPFFIAPVQVVLIPITESQHQYAQSLRKKIIALGAYAEVMNKNETLNKKI 548

Query: 596 REHSIKKIPIIIICGDKEASERSIGIR 622
           R    + +P+I++ G KE +  ++ IR
Sbjct: 549 RNAEKQHVPMILVIGQKEQNSGTLAIR 575


>gi|326792022|ref|YP_004309843.1| threonyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
 gi|326542786|gb|ADZ84645.1| threonyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
          Length = 657

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 242/627 (38%), Positives = 361/627 (57%), Gaps = 19/627 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           IK+T  DGS+K      T   VAE +S  LA+ A A  +NG++ DL   +  + ++EI+T
Sbjct: 2   IKITLKDGSVKECQKGITVLGVAEELSAGLARMACAGKVNGEMVDLRTELNGDCNLEILT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
             D       RH+ AHI+A+AV+ ++PEV++AIGP IEDGFYYDFD E+ F   +  +IE
Sbjct: 62  FNDKEGKWAFRHTAAHILAQAVKRVFPEVKLAIGPAIEDGFYYDFDTERHFVEADFEKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M++I+    P  +  L  E+A +L E  +E YKVE++  +P  E +T Y+QG++ DLC
Sbjct: 122 AEMKKIVKEKLPIERFELPREEAIKLMEEAEEPYKVELIRELPEGEKITFYKQGDFVDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+ ST  V+  FK++  AGAYW+G+    ML+RIY TA+  + +L  +L  LEE++K
Sbjct: 182 AGPHLMSTKPVEA-FKILSAAGAYWKGNEKNKMLARIYATAFTKKADLAAHLEALEEAKK 240

Query: 244 RDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLD 301
           RDH KL RE+ LF   E  G G+     KG +I QTL  ++   + K  Y    TP +  
Sbjct: 241 RDHNKLGRELKLFTTDEKVGQGLPLLMPKGARIVQTLQRFVEDEEEKRGYVLTKTPLMAK 300

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             L++ SGHWD Y+  MF +    D  KD   FAL+PM CP    V+N    SYR+LP+R
Sbjct: 301 SDLYKMSGHWDHYKDGMFVL---GDEEKDKEVFALRPMTCPFQFTVYNAEQHSYRDLPIR 357

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
             E  +++RNE SG +HGL+RVR FT  + H+ CT EQ+ +E   +  LI  +    G E
Sbjct: 358 YGETSTLFRNESSGEMHGLIRVRQFTISEGHLVCTPEQLEDEFRGVIELINYMMATLGIE 417

Query: 422 K-IMVKLS----TRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
             I  + S        K +     W+  E +M+ +LD ++      IN    +GE AFYG
Sbjct: 418 NDISYRFSKWDPANTGKYINDPEAWERTEGLMRNILDHLQ------INYEEAVGEAAFYG 471

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK +   K+  G++    T+Q+DF L  R    Y+++  EK HP++IHR   G  ER + 
Sbjct: 472 PKLDIQFKNVHGKEDTIITVQIDFALGERLGMTYIDADGEKKHPLIIHRTSIGCYERTLA 531

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH-LSIETDFRNETINYKI 595
           ++IE + G  P WL+P+   V  ++    +YA E+    K H  L +E D+R E I YKI
Sbjct: 532 MLIEKYAGQFPTWLAPVAVKVLPLSDKYADYAAEVVKAFKDHGILKVEADYRTEKIGYKI 591

Query: 596 REHSIKKIPIIIICGDKEASERSIGIR 622
           RE  +++IP I++ G +E   +++ +R
Sbjct: 592 REARMERIPYIVVVGAEEMENKTVSVR 618


>gi|116515019|ref|YP_802648.1| hypothetical protein BCc_078 [Buchnera aphidicola str. Cc (Cinara
           cedri)]
 gi|116256873|gb|ABJ90555.1| threonyl-tRNA synthetase [Buchnera aphidicola str. Cc (Cinara
           cedri)]
          Length = 642

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 231/595 (38%), Positives = 370/595 (62%), Gaps = 23/595 (3%)

Query: 39  VAVAINGKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIG 97
           +A  IN ++ DL+  V   S IE+I   +   L ++R+SC  ++   ++ IWP +++A G
Sbjct: 34  IAGFINNQLSDLNTLVSHNSTIELIDENNKNFLYMLRYSCMQLLNYTLKIIWPNIKIAGG 93

Query: 98  PIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAY 157
            I E GFY DFD     +  +  +I + M + I        + ++ +K  ++ + +KE Y
Sbjct: 94  NITESGFYCDFDMPHILTKKDFNKISQNMLKKIFSSYNIFFKKITKKKILDILKKRKEIY 153

Query: 158 KVEILESIPAKENV-TLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPM 216
           ++EIL+      ++  +    ++++L   P + +    K F  L  V+GAYW  + N  M
Sbjct: 154 QIEILKKFFFDTDIINICYHEKYYELSVHPQLSNISFCKHFL-LNNVSGAYWNNNKNNKM 212

Query: 217 LSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIF 276
           L RI+  +W ++++L ++L   E+ +  DHRK+++ + L+HI ++  G+IFWH+ G+ IF
Sbjct: 213 LQRIHVISWISRKQLLEFLKKKEKLKLCDHRKISKLLSLYHIQKESPGMIFWHKNGYIIF 272

Query: 277 QTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFA 335
           + L +++R K+ +++Y E+ +P ++D+ LW++SGHW  Y  ++F  K  ++       + 
Sbjct: 273 KQLENFLRNKLFQNNYIEVKSPIIIDKSLWKKSGHWKHYNQSIFTTKSENNQ------YC 326

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC 395
           +KPMNCP HV +F +GLKSY++LP+R+AEFGS +R E SGSLHGL RVRGFTQDDAH+FC
Sbjct: 327 IKPMNCPAHVQIFKYGLKSYKDLPIRMAEFGSCHRQETSGSLHGLFRVRGFTQDDAHIFC 386

Query: 396 TKEQM---FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
           TK+Q+    N C++   L+  +Y  FGF+KI +K STRPE R+G D +WD AE  ++ VL
Sbjct: 387 TKKQIKSELNHCIR---LLFDLYHTFGFKKIFIKFSTRPENRIGKDDIWDQAEKDLELVL 443

Query: 453 DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
                  ++ +     +GEGAFYGPK E  L+D + R WQCGTIQ+DF L  + +AFY+N
Sbjct: 444 ------KKNNLFFEYQIGEGAFYGPKIEIALEDNLKRIWQCGTIQLDFYLSKQLDAFYIN 497

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIA 572
            ++ K +P++IHRA  GSIERFIGI+IE + G LP+WL PIQ  +  ++   + + + I 
Sbjct: 498 KNNIKKNPIIIHRAFLGSIERFIGILIEEYNGKLPIWLCPIQVAIINVSEKHIFFIKNIE 557

Query: 573 NLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR-RFGS 626
                +++   +D  N +I++KIR +  +K+P III GDKE     I IR RF +
Sbjct: 558 KKFLKNNIRFISDISNNSISFKIRFYLEQKVPYIIIIGDKEVKNNYITIRNRFNN 612


>gi|145224420|ref|YP_001135098.1| threonyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
 gi|189083613|sp|A4TD09|SYT_MYCGI RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|145216906|gb|ABP46310.1| Ser-tRNA(Thr) hydrolase [Mycobacterium gilvum PYR-GCK]
          Length = 695

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 250/632 (39%), Positives = 377/632 (59%), Gaps = 55/632 (8%)

Query: 35  AKKAVAVA--INGKVCDLSDPVREGSIEIITP-----EDPRSLAVIRHSCAHIMAEAVQS 87
           A  AV V    +G++ DLS  V +  +E+ TP     ED RS  VIRHS AH++A+AVQ 
Sbjct: 35  APDAVVVVRDADGRLRDLS-WVPDTDVEV-TPVAADTEDGRS--VIRHSAAHVLAQAVQE 90

Query: 88  IWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKAR 147
           ++P+ ++ IGP I DGFYYDFD  +PF+ + L  +EKKM++I+ +D    ++ +   K  
Sbjct: 91  MFPDAKLGIGPPITDGFYYDFDVAEPFTPEHLQALEKKMRKIV-KDGQIFERRVFGSKDE 149

Query: 148 ELFESKKEAYKVEILESIPAKEN----------VTLY-------RQGEWFDLCRGPHVRS 190
              E   E YK+E+++     ++          +T Y       R+  W DLCRGPH+ +
Sbjct: 150 ARAELASEPYKLELIDDKSGADDPEVMEVGGDELTAYDNLNPRTRERVWGDLCRGPHIPT 209

Query: 191 TGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLA 250
           T  +  F  L + + AYWRGD N   L RIYGTAW +Q+ L ++L  +EE+++RDHRKL 
Sbjct: 210 TRYIPAF-TLTRSSAAYWRGDQNNASLQRIYGTAWESQEALDRHLELIEEAQRRDHRKLG 268

Query: 251 REMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQS 308
            E+DLF   ++ GSG+  +H KG  + + L  Y RRK I+  YE +NTP +  + L+  S
Sbjct: 269 VELDLFSFPDELGSGLPVFHPKGGVVRRELEEYSRRKHIEAGYEFVNTPHITKEQLYITS 328

Query: 309 GHWDSYRANMF------AVKCADDTI-KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           GH + Y   MF      A    D T+ K  + + LKPMNCP H  ++    +SYRELP+R
Sbjct: 329 GHLEWYADGMFPPMQIDAEYNEDGTVRKPGQDYYLKPMNCPMHHLIYRSRGRSYRELPLR 388

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           L EFGSVYR E SG +HGL RVRG TQDDAH++CT+E+M +E  ++   ++ +  D+G +
Sbjct: 389 LFEFGSVYRYEKSGVIHGLTRVRGMTQDDAHIYCTREEMRDELARLLQFVLDLLADYGLD 448

Query: 422 KIMVKLSTR-PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL----GEGAFYG 476
              ++LST+ P+K VGSD LW++A   ++ V ++          +G+ L    G  AFYG
Sbjct: 449 DFYLELSTKDPDKFVGSDDLWEEATETLREVAES----------SGLALVPDPGGAAFYG 498

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK    ++DA+GR+WQ  TIQ+DFN+P RF   Y +S   +  PV+IHRA+FGSIERF G
Sbjct: 499 PKISVQVRDALGRNWQMSTIQLDFNMPDRFELEYTSSDGTRRRPVLIHRALFGSIERFFG 558

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           ++ E++ G  P+WL+P+Q +   +  +   Y   +A  L+   + +E D  ++ +  KI 
Sbjct: 559 VLTEHYAGAFPVWLAPVQVVGIPVADAHAGYLDGVAAELRRRGIRVEVDASDDRMAKKIV 618

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
            H+ +K+P +++ GDK+    ++   RFG  T
Sbjct: 619 NHTNQKVPFMLLAGDKDVEAGAVSF-RFGDRT 649


>gi|296139628|ref|YP_003646871.1| threonyl-tRNA synthetase [Tsukamurella paurometabola DSM 20162]
 gi|296027762|gb|ADG78532.1| threonyl-tRNA synthetase [Tsukamurella paurometabola DSM 20162]
          Length = 677

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 250/629 (39%), Positives = 359/629 (57%), Gaps = 38/629 (6%)

Query: 39  VAVAINGKVCDLS-DPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIG 97
           V    +G + DLS  P  +  +E +         VIRHS AH++A+AVQ  +P  ++ IG
Sbjct: 32  VVKTTDGTLKDLSWVPETDTEVEAVAANTDDGRNVIRHSAAHVLAQAVQDGFPGTKLGIG 91

Query: 98  PIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQ-YLSHEKARELFESKKEA 156
           P I DGFYYDFD  +PF+ ++L  +EKKM++II     F ++ Y S ++AR   E   E 
Sbjct: 92  PYITDGFYYDFDVAEPFTPEDLKNLEKKMKQIIKAGQKFSRRVYASKDEARA--ELAGEP 149

Query: 157 YKVEILESIPAKEN----------VTLY-----RQGE--WFDLCRGPHVRSTGQVKKFFK 199
           YK+E+++   A ++          +T Y     R GE  W DLCRGPHV +T  +    K
Sbjct: 150 YKLELIDDKGAADDSEVMEVGGAELTAYDNLNPRTGERIWGDLCRGPHVPTTKYIPAV-K 208

Query: 200 LMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIA 259
           L + + AYWRGD N   L RIYGTAW + +   +YL  L E+EKRDHR+L  E+DLF   
Sbjct: 209 LTRSSAAYWRGDQNNADLQRIYGTAWESPEAQDEYLELLAEAEKRDHRRLGAELDLFSFP 268

Query: 260 ED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRAN 317
           +  GSG+  +H KG  I + L  Y R R +   YE +NTP +    L++ SGH D Y+  
Sbjct: 269 DALGSGLPVFHPKGGIIRKELEEYSRQRHVDAGYEFVNTPHLTKSALYEVSGHLDWYKDG 328

Query: 318 MFAVKCAD-------DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYR 370
           MF     D       +  K  + + +KPMNCP H  +F+   +SYRELP+RL EFGSVYR
Sbjct: 329 MFPAMHLDAEYDDEGNVTKPGQDYYVKPMNCPMHNLIFDARGRSYRELPLRLFEFGSVYR 388

Query: 371 NEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR 430
            E SG +HGL RVRG TQDDAH++CTKEQM  E       ++S+ KD+G +   ++LST+
Sbjct: 389 YEKSGVIHGLTRVRGMTQDDAHIYCTKEQMHGELTTTLKFVLSLLKDYGLDDFYLELSTK 448

Query: 431 -PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGR 489
            PEK VG D +W++A   ++ V +    S  D +      G  AFYGPK     KDA+GR
Sbjct: 449 NPEKYVGDDDVWEEATKTLQQVAEA---SGLDLVPDP---GGAAFYGPKISVQAKDALGR 502

Query: 490 DWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW 549
            WQ  TIQ+DFNLP RF   Y      K  PVMIHRA+FGSIERF G++ E++ G  P W
Sbjct: 503 TWQMSTIQLDFNLPERFELEYTAPDGTKQRPVMIHRALFGSIERFFGVLTEHYAGAFPAW 562

Query: 550 LSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIIC 609
           L+P Q +   +     ++ + +   L++  +    D  ++ +  KIR H+ +K+P +++ 
Sbjct: 563 LAPEQVVGIPVAEQFGDHLETVIRKLRAEGIRAHVDHSDDRMQKKIRNHTTQKVPFMLLA 622

Query: 610 GDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           G+++    ++  R    T   +V + DA+
Sbjct: 623 GERDREAGAVSFRFRDGTQVNEVPVDDAV 651


>gi|332672963|gb|AEE69780.1| threonine--tRNA ligase [Helicobacter pylori 83]
          Length = 612

 Score =  457 bits (1176), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 238/591 (40%), Positives = 358/591 (60%), Gaps = 37/591 (6%)

Query: 44  NGKVCDLSDPVR--EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE 101
           + KV  LSD ++   G+  I   + P +L VIRHSCAH++A+++++++P+ +  +GP++E
Sbjct: 19  SAKVLGLSDGIKALNGTEPIYFDDSPLALEVIRHSCAHLLAQSLKALYPDAKFFVGPVVE 78

Query: 102 DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEI 161
           +GFYYDF      S ++L +IE KM+E         K+ L+ E+A E F  K +  K  +
Sbjct: 79  EGFYYDFKTASKISEEDLPKIEAKMKEFAKLKLAITKEVLTREQALERF--KGDELKHAV 136

Query: 162 LESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIY 221
           +  I   +   +Y+QGE+ DLC+GPH+ +T +    F+L K+AGAY  GD N  ML RIY
Sbjct: 137 MSKISG-DAFGVYQQGEFEDLCKGPHLPNT-RFLNHFRLTKLAGAYLGGDENNEMLIRIY 194

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLI 280
           G A+ T++ L  YL+ +EE++KRDHRKL  E+ LF   ++ G G+  W  KG +      
Sbjct: 195 GIAFATKEGLKDYLFQIEEAKKRDHRKLGMELGLFSFDDEIGVGLPLWLPKGAR------ 248

Query: 281 SYMRRKIKD---------DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
             +R++I+D          YE +  P++L   +W+ SGH+D+Y+ NM+       T  D 
Sbjct: 249 --LRKRIEDLLSKALLLRGYEPVKGPEILKSDVWKISGHYDNYKENMYF------TTIDE 300

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
           + + +KPMNC GH+ V+   L SYR+LP+R  E+G V+R+E SG LHGL+RVR FTQDDA
Sbjct: 301 QEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDA 360

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
           H+FC+ EQ+ +E   I +    I + FGF   M +LSTRP K +G D +W+ A N +K  
Sbjct: 361 HIFCSFEQIQSEVSAILDFTHKIMQAFGFSYEM-ELSTRPAKSIGDDKVWEKATNALKEA 419

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
           L       + RI+  +  G GAFYGPK +  + DA+ R WQCGTIQVD NLP RF   + 
Sbjct: 420 L------KEHRIDYKIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDMNLPERFKLAFT 473

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
           N H+    PVMIHRA+ GS ERFI I+ E+F GN P +++P Q  +  I      +A ++
Sbjct: 474 NEHNHAEQPVMIHRAILGSFERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHVFALKL 533

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
              LK H + +E   +N+++N K+R    +KIP+I++ G++E     + IR
Sbjct: 534 KEALKKHDIFVEVLDKNDSLNKKVRLAEKQKIPMILVLGNEEVESEILSIR 584


>gi|297623866|ref|YP_003705300.1| threonyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
 gi|297165046|gb|ADI14757.1| threonyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
          Length = 665

 Score =  457 bits (1176), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 244/648 (37%), Positives = 374/648 (57%), Gaps = 34/648 (5%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPE 65
           +T PDG     P  AT  DVA++I   LAK A+   + G++ DL   + +G+ + I+T +
Sbjct: 3   VTLPDGKRLELPAGATARDVAQAIGPGLAKAALGATVGGQLTDLLSELPDGAEVAILTKK 62

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIW------PE-VQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           D   + ++RH+ AH+MA+AV+ ++      PE +++ +GP+I++GFYYDFD  +  + D+
Sbjct: 63  DEAVVRLMRHTLAHVMAQAVRDLFVAEGYAPERIKMGVGPVIDNGFYYDFDLPRTLTPDD 122

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L +IE +M+EII    P  +  L   +A   FE + + YK+E+++++P    +T Y QG 
Sbjct: 123 LERIEARMREIIRAKLPLRRFALPRAEALARFEGR-DPYKLELIQNLPEDVPITFYEQGG 181

Query: 179 ---WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
              + DLCRGPHV +TG + + FKLM VAGAYWRGD  RPML R+YG A+ T++EL  +L
Sbjct: 182 ADGFTDLCRGPHVPNTGDLPQHFKLMSVAGAYWRGDETRPMLQRVYGVAFRTKEELEDHL 241

Query: 236 YFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKI---FQTLISYMRRKIKDDY 291
           + LEE++KRDHRKL  E+++F + +D G G+  W  +G  I    + L   M R+    Y
Sbjct: 242 WRLEEAKKRDHRKLGAELEIFTLDDDIGPGLPLWLPRGAVIVEEIEKLAKEMERRA--GY 299

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           +++ TP V  + L+ +SGH   Y  +MF     D+       + LKPMNCP H  +F   
Sbjct: 300 QQVRTPHVTKEQLFTRSGHLPYYAESMFPPMELDNV-----RYYLKPMNCPFHHKIFAAR 354

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI 411
            +SYRELP+RLAE+G+ YR E  G+L GLMRVR    +DAH++CT EQ  +E + +  L 
Sbjct: 355 PRSYRELPLRLAEYGTCYRYEDHGALMGLMRVRSMQMNDAHIYCTPEQFEDEFMGVIALY 414

Query: 412 ISIYKDFGFEKIMVKLSTRP-----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           +  ++ FG    +++LS        +K V +  LW+  E +++G L+      +  IN  
Sbjct: 415 LEYFRLFGIRDYVMRLSKHSRAGLGKKYVNNPELWEQTEAMVRGALE------RGGINFI 468

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
            +  E AFYGPK +  +   IGR++   T QVDF +P+RF   YV     +  P+ +HRA
Sbjct: 469 EVEDEAAFYGPKIDVQIYSVIGREFTLATNQVDFAVPARFGLEYVAEDGSRKTPLCLHRA 528

Query: 527 VFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF 586
              + ER +G ++E+F G+ PLWL+P Q  V  I      YAQ +   L    L  E D 
Sbjct: 529 PLSTHERLVGFLLEHFAGDFPLWLAPEQVRVVPIADRHNAYAQSLKARLAEAGLRAEADL 588

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           R E +N K+R+  + K+P  +I GDKE    ++  R       + VS+
Sbjct: 589 RGERMNAKVRDAELLKVPYTVIVGDKEVEAGALSFRSRKEPEQKGVSV 636


>gi|257459979|ref|ZP_05625083.1| threonyl-tRNA synthetase [Campylobacter gracilis RM3268]
 gi|257442420|gb|EEV17559.1| threonyl-tRNA synthetase [Campylobacter gracilis RM3268]
          Length = 607

 Score =  457 bits (1176), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 242/594 (40%), Positives = 361/594 (60%), Gaps = 29/594 (4%)

Query: 39  VAVAINGKVCDLSDPVREGS----IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           +A  +NG++ D        S    I     ED  +L VIRHSCAH++A+AV+ ++P  + 
Sbjct: 5   IAYKLNGEIYDTQSIGERASEAQPIYFDNSED--ALKVIRHSCAHLLAQAVRELYPSAKF 62

Query: 95  AIGPIIEDGFYYDF----DKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELF 150
            +GP IEDGFYYD     +  +    ++L  IEKKM+ +   +    K   + E   + +
Sbjct: 63  FVGPAIEDGFYYDMRVSKNGGEKLGEEDLKAIEKKMRALAEANLEIKKIASTKEAVAKKY 122

Query: 151 ESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRG 210
            +  +  K E+L+ IP +  V+LY QGE+ D+CRGPHV++T  +K F  L ++AGAY  G
Sbjct: 123 AN--DDLKQEVLKRIP-EGPVSLYAQGEFEDICRGPHVQNTKFLKNF-ALTRIAGAYLGG 178

Query: 211 DSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWH 269
           D  R ML+RIYG  +  +  L ++L  LEE++KRDHRKL  EM  F   E  G+G+  W 
Sbjct: 179 DEKREMLTRIYGVVFADKDSLKKHLTMLEEAKKRDHRKLGTEMKFFTFDEQIGAGLPIWL 238

Query: 270 RKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTI 328
             G ++   L   + R++ K  YE +  P++L    W+ SGH+ +Y+ NM+       TI
Sbjct: 239 PAGTRMRIKLEGRLYRQLRKRGYEPVRGPEILKSDAWKISGHYSNYKENMYFT-----TI 293

Query: 329 KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQ 388
           ++ + + +KPMNC GH+ V+   ++SYR+LP++  E+G V+R+E SG LHGL RVR FTQ
Sbjct: 294 EE-QEYGIKPMNCVGHIKVYQSEIRSYRDLPLKFCEYGVVHRHEKSGVLHGLFRVREFTQ 352

Query: 389 DDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIM 448
           DDAH+F    Q+     +I + +  + K FGFE   +++ST+P+K VG D +WD A   +
Sbjct: 353 DDAHLFVMPSQIKENVYEILDFVELLMKAFGFE-YELEISTKPQKAVGDDEVWDIATKAL 411

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
           K  LD      +  +  G+  G GAFYGPK +  + DA+GR WQCGT+QVDFNLP+RF  
Sbjct: 412 KDALD------EKGLKYGLDEGGGAFYGPKIDIKITDALGRKWQCGTVQVDFNLPARFEL 465

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYA 568
            Y++ ++EK  PVM+HRA+ GS ERF+GI++E+  G LP W+ P Q  +  I  +   YA
Sbjct: 466 GYIDENNEKKQPVMLHRAILGSFERFVGILLEHTAGELPFWICPTQVSIVPIGEAHASYA 525

Query: 569 QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           +EI NLL++  +  E   RNET+N +IR    +K+P+II+ GD E S RS+ +R
Sbjct: 526 KEILNLLRAADIDGEILDRNETLNKRIRTAEKQKVPLIIVLGDNEVSARSVALR 579


>gi|108799209|ref|YP_639406.1| threonyl-tRNA synthetase [Mycobacterium sp. MCS]
 gi|119868325|ref|YP_938277.1| threonyl-tRNA synthetase [Mycobacterium sp. KMS]
 gi|126434867|ref|YP_001070558.1| threonyl-tRNA synthetase [Mycobacterium sp. JLS]
 gi|122977050|sp|Q1B9T4|SYT_MYCSS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|166225465|sp|A3PYU0|SYT_MYCSJ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|166225466|sp|A1UF79|SYT_MYCSK RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|108769628|gb|ABG08350.1| Ser-tRNA(Thr) hydrolase [Mycobacterium sp. MCS]
 gi|119694414|gb|ABL91487.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Mycobacterium
           sp. KMS]
 gi|126234667|gb|ABN98067.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Mycobacterium
           sp. JLS]
          Length = 684

 Score =  457 bits (1175), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 246/615 (40%), Positives = 371/615 (60%), Gaps = 43/615 (6%)

Query: 44  NGKVCDLSDPVREGSIEIIT----PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPI 99
           +G++ DLS    +  +E++      ED RS  VIRHS AH++A+AVQ ++PE ++ IGP 
Sbjct: 46  DGRLRDLS-WTPDADVEVVPVPADSEDGRS--VIRHSAAHVLAQAVQDLFPEAKLGIGPP 102

Query: 100 IEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQ-YLSHEKARELFESKKEAYK 158
           I DGFYYDFD  + F+ ++L  +EKKM++I+     F ++ Y S E+AR   E   E YK
Sbjct: 103 ITDGFYYDFDVPRAFTPEDLEALEKKMRKIVKDGQLFERRVYESEEEARR--ELANEPYK 160

Query: 159 VEILESIPAKENV--------TLY-------RQGEWFDLCRGPHVRSTGQVKKFFKLMKV 203
           +E+++       V        T Y       R+  W DLCRGPH+ +T  +  F KL + 
Sbjct: 161 LELVDDKSGDPEVMEVGGDELTAYDNLNPRTRERVWGDLCRGPHIPTTKYIPAF-KLTRS 219

Query: 204 AGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-G 262
           + AYWRGD     L RIYGTAW +Q+ L ++L  +EE+++RDHRKL  E+DLF   ++ G
Sbjct: 220 SAAYWRGDQTNASLQRIYGTAWESQEALDRHLELIEEAQRRDHRKLGVELDLFSFPDELG 279

Query: 263 SGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMF-- 319
           SG+  +H KG  + + L  Y R K ++  YE +NTP +  + L+  SGH + Y   MF  
Sbjct: 280 SGLPVFHPKGGIVRKELEDYSRAKHLQAGYEFVNTPHITKEQLYVTSGHLEWYADGMFPA 339

Query: 320 ----AVKCADDTI-KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
               A   AD  + K  + + LKPMNCP H  ++    +SYRELP+RL EFGSVYR E S
Sbjct: 340 MHIDAEYDADGAVRKPGQNYYLKPMNCPMHHLIYRSRGRSYRELPLRLFEFGSVYRYEKS 399

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR-PEK 433
           G +HGL RVRG TQDDAH++ T+EQM +E   +   ++ +  D+G ++  ++LST+ P+K
Sbjct: 400 GVVHGLTRVRGMTQDDAHIYATREQMRDELTSLLQFVLDLLSDYGLDEYYLELSTKDPDK 459

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
            VGSD +WD+A   ++ V +    S  D +      G  AFYGPK    +KDA+GR+WQ 
Sbjct: 460 YVGSDEIWDEATETLREVAEA---SGLDLVPDP---GGAAFYGPKISVQVKDALGRNWQM 513

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI 553
            TIQ+DFN+P RF   Y  +   +  PV+IHRA+FGSIERF G++ E++ G  P WL+P+
Sbjct: 514 STIQLDFNMPERFELEYTAADGSRQRPVLIHRALFGSIERFFGVLTEHYAGAFPAWLAPV 573

Query: 554 QAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
           Q +   +  + + Y +++A  L+S  + +E D  ++ +  KI  H+ +++P +++ GDK+
Sbjct: 574 QVVGIPVADAHIPYLEDVAAQLRSRGVRVEIDGSDDRMAKKIVNHTNQRVPFMLLAGDKD 633

Query: 614 ASERSIGIRRFGSTT 628
            +  ++   RFG  T
Sbjct: 634 VAAGAVSF-RFGDRT 647


>gi|182419388|ref|ZP_02950640.1| threonyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237666667|ref|ZP_04526652.1| threonine--tRNA ligase [Clostridium butyricum E4 str. BoNT E
           BL5262]
 gi|182376719|gb|EDT74291.1| threonyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237657866|gb|EEP55421.1| threonine--tRNA ligase [Clostridium butyricum E4 str. BoNT E
           BL5262]
          Length = 643

 Score =  457 bits (1175), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 246/626 (39%), Positives = 363/626 (57%), Gaps = 20/626 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           IK+T  DGS+K F    +  D+A+SIS  LA+ A    INGKVCDL   V E   + I T
Sbjct: 2   IKVTLKDGSVKEFEAGVSVLDIAKSISEGLARNAFCGTINGKVCDLRTIVNEDVELSICT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +       +RHS +H++A AV+ ++PE ++AIGP I  GFYYDFD++  F+S +L ++E
Sbjct: 62  FDSQEGKDAVRHSISHVLAYAVKRLFPETKLAIGPSIATGFYYDFDRDTAFTSADLEKLE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M++II  +    K  L  ++A EL   K E YKVE++  +P  E ++ Y+ G++ DLC
Sbjct: 122 AEMKKIIKENPSIEKFELPRDEALELM--KDEPYKVELINDLPEDEIISFYKIGDFTDLC 179

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPHV S   +K   KL + AGAYW+G+    ML+RIYGTA+  + EL ++L  LEE++K
Sbjct: 180 AGPHVMSLKNIKAI-KLTRSAGAYWKGNEKNKMLTRIYGTAFLKKAELDEFLEALEEAKK 238

Query: 244 RDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLD 301
           RDH KL RE+ LF   E  G G+     KG KI QTL  ++   + K  Y    TP +  
Sbjct: 239 RDHNKLGRELKLFTTDEKVGQGLPLLMPKGAKIVQTLQRWVEDEEEKRGYVLTKTPLMAK 298

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             L++ SGHWD Y+  MF +    D  KD   FAL+PM CP    ++N    SYR+LP+R
Sbjct: 299 SDLYKVSGHWDHYKDGMFVL---GDEEKDDEVFALRPMTCPFQYTIYNAEQHSYRDLPIR 355

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF- 420
            AE  +++RNE SG +HGL+RVR FT  D H+  T EQ+  E   +  LI  + +  G  
Sbjct: 356 YAETSTLFRNEASGEMHGLIRVRQFTLADGHLIVTPEQLEEEFKGVVELIQYLMETLGIA 415

Query: 421 EKIMVKLS----TRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           EKI  + S       EK +     W+  ++ M+ +LD +K      IN      E AFYG
Sbjct: 416 EKITYRFSKWDPNNTEKYINDPDAWNHTQDTMRNILDHLK------INYVEADDEAAFYG 469

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK +   ++  G++    T+Q+DF L  RF+  Y++ + EK  P +IHR+  G  ER + 
Sbjct: 470 PKLDLQFRNVHGKEDTLFTVQIDFALAERFDMTYIDKNGEKKRPYIIHRSSIGCYERTLA 529

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           ++IE + G  P WLSP+QA +  ++    +YA+++   LK   + +ETD+R E I YKIR
Sbjct: 530 MLIEEYAGAFPTWLSPVQAKILPLSDKYNDYAEKVTKALKDKGIRVETDYRAEKIGYKIR 589

Query: 597 EHSIKKIPIIIICGDKEASERSIGIR 622
           E  +++ P I++ G+KEA    + +R
Sbjct: 590 EARLERTPYILVVGEKEAENNQVSVR 615


>gi|320528406|ref|ZP_08029568.1| threonyl-tRNA synthetase [Solobacterium moorei F0204]
 gi|320131320|gb|EFW23888.1| threonyl-tRNA synthetase [Solobacterium moorei F0204]
          Length = 591

 Score =  456 bits (1174), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 236/596 (39%), Positives = 365/596 (61%), Gaps = 26/596 (4%)

Query: 69  SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE-LAQIEKKMQ 127
           +L  + HSCAH+MA+AV+ ++P+ +  +GP++E+GFYYD D       DE LA+IEK+M+
Sbjct: 9   ALNTLNHSCAHLMAQAVKHLYPQAKFWVGPVVEEGFYYDIDLGDDVIRDEDLAKIEKEMK 68

Query: 128 EIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPH 187
           +    D   ++Q ++ E+A E F  K + YK++++  +P   ++++Y QG++ DLCRGPH
Sbjct: 69  KCAKADKRIVRQEITREEALEQF--KDDEYKIDLINRMPEGTHISMYTQGDFTDLCRGPH 126

Query: 188 VRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHR 247
             ST   + +FKL+K +GAYW+GD N  +L RIYG    TQ+EL  +L  LE++++RDHR
Sbjct: 127 TESTKNCR-YFKLIKHSGAYWKGDKNNKVLQRIYGVCLPTQEELDSHLADLEDAKQRDHR 185

Query: 248 KLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQVLDQHLW 305
           KL ++M +F  ++  G G+  W   G  + + L  Y M +++   Y+ + TP V    L+
Sbjct: 186 KLGKDMQIFMFSDIVGGGLPLWLPNGLTVRRLLSDYIMNKELARGYQHVLTPSVASTKLY 245

Query: 306 QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEF 365
           + SGH   Y+ +MF +   DD       F L+PMNCP H+ ++   L SYR+LP+R+AE 
Sbjct: 246 KISGHLAHYKDDMFPIMSRDDD-----EFVLRPMNCPEHMIIYKSQLHSYRDLPIRIAEI 300

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
            + +R E SG+L G+ R R FTQ+D+H+FCT+EQ+ +E   +  LI+ +YKDF   +   
Sbjct: 301 ANDFRFEASGALTGIERSRAFTQNDSHIFCTEEQIASEIKAVTELILDVYKDFNLNQFEF 360

Query: 426 KLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
           +LS R     EK  G+D LW+ +E+ ++ VL  +     +        GE AFYGPK + 
Sbjct: 361 RLSLRDKENTEKYFGNDDLWERSESELREVLKEMNVPYYE------AEGEAAFYGPKIDV 414

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            ++ A+G D    TIQ+D+ LP RF   YV +  EK  PV+IHRA+ GSI+RF+  ++E 
Sbjct: 415 QVRSALGHDVTLSTIQLDYQLPERFELEYVANGGEKKRPVVIHRAILGSIDRFVAFLLEE 474

Query: 542 FKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
            KG LPLWL+P QA+V  ++  A  EYA+++   L+   +  E D RNE + Y+IRE   
Sbjct: 475 TKGILPLWLAPRQAVVIPVSPEAHGEYAKKVVEELRKIGVRTELDDRNEKLGYRIREAQT 534

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL---LDAIPI-LTKESLPPDCQK 652
            K+PI ++ GD E     I +RR+GS    K+SL   L AI + + ++ L P+ QK
Sbjct: 535 NKLPIEVVVGDGEIENNGITLRRYGSRQETKMSLEEFLAAIKVEIDEKRLAPEVQK 590


>gi|302541133|ref|ZP_07293475.1| threonine-tRNA ligase [Streptomyces hygroscopicus ATCC 53653]
 gi|302458751|gb|EFL21844.1| threonine-tRNA ligase [Streptomyces himastatinicus ATCC 53653]
          Length = 659

 Score =  455 bits (1171), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 256/662 (38%), Positives = 379/662 (57%), Gaps = 43/662 (6%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLS-DPVREGSIEI 61
           SD+++     S +   V  TG+  A+  +    +  VA  + G++ DL+ +P     IE 
Sbjct: 2   SDVRVIIQRDSEREERVVTTGTTAADLFAGD--RSIVAARVGGQLKDLAYEPADGEEIEP 59

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +       L ++RHS AH+MA+AVQ ++PE ++ IGP I+DGFYYDFD E PF  ++L +
Sbjct: 60  VEITSQDGLDILRHSTAHVMAQAVQELFPEAKLGIGPPIKDGFYYDFDVETPFQPEDLKR 119

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL--------------ESIPA 167
           IEKKMQEI  R   F ++ ++ E ARE      E YK+E++                + A
Sbjct: 120 IEKKMQEIQKRGQKFSRRAVTDEAAREE--LAAEPYKLELIGLKGSAADAAEGASAEVGA 177

Query: 168 KENVTLY-----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRI 220
            E +T+Y     + G+  W DLCRGPH+ +T  +  F KLM+ A AYWRG    P L RI
Sbjct: 178 GE-LTIYDNLDAKSGDLCWKDLCRGPHLPTTRNIPAF-KLMRSAAAYWRGSEKNPQLQRI 235

Query: 221 YGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTL 279
           YGTAW T+ EL  YL FL E+EKRDHRKL  E+DLF   ++ GSG+  +H +G  I + +
Sbjct: 236 YGTAWPTKDELKAYLEFLAEAEKRDHRKLGAELDLFSFPDELGSGLAVFHPRGGVIRKEM 295

Query: 280 ISYMRRKIKDD-YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKP 338
             Y R++ ++  YE +N+P +    L++ SGH   Y   MF     +      + + LK 
Sbjct: 296 EDYSRKRHEESGYEFVNSPHITKAKLFETSGHLPHYMDGMFPPMEFEG-----QDYYLKA 350

Query: 339 MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE 398
           MNCP H  +F    +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDD+H++CTKE
Sbjct: 351 MNCPMHNLIFRARGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDSHIYCTKE 410

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLSTR--PEKRVGSDALWDDAENIMKGVLDTIK 456
           QM +E   +   ++ + +D+G     ++LSTR   +K +G    W++A   ++      K
Sbjct: 411 QMADELDNLLTFVLDLLRDYGLNDFYLELSTRDDSDKFMGEPEQWEEATEELR------K 464

Query: 457 NSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE 516
            + +  +   +  G  AFYGPK     KDAIGR WQ  TIQVDFN P+RFN  Y  +   
Sbjct: 465 AAEKQGLELVMDPGGAAFYGPKISVQAKDAIGRTWQMSTIQVDFNQPARFNLEYTAADGS 524

Query: 517 KCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLK 576
           +  PVM+HRA+FGSIERF  +++E++ G  P WL+P+QA+   I    V Y +E A   +
Sbjct: 525 RQQPVMLHRALFGSIERFFAVLLEHYAGAFPAWLAPVQAVGIPIGDGHVPYLEEFAAQAR 584

Query: 577 SHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
           +  L +E D  ++ +  KIR     K+P ++I GD++ +  ++  R    +    + + +
Sbjct: 585 AKGLRVEVDSSSDRMQKKIRNAQRSKVPFMVIAGDEDVAAGAVSFRYRDGSQKNGIPIDE 644

Query: 637 AI 638
           AI
Sbjct: 645 AI 646


>gi|227549145|ref|ZP_03979194.1| threonyl-tRNA synthetase [Corynebacterium lipophiloflavum DSM
           44291]
 gi|227078786|gb|EEI16749.1| threonyl-tRNA synthetase [Corynebacterium lipophiloflavum DSM
           44291]
          Length = 884

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 245/633 (38%), Positives = 366/633 (57%), Gaps = 48/633 (7%)

Query: 44  NGKVCDLSD-PVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIED 102
           +G++ DLS  P  + +   +        +VIRHS AH++A+AVQ+ +P  ++ IGP I+D
Sbjct: 45  DGELKDLSHIPDADATFMPVAANTELGRSVIRHSAAHVLAQAVQAEFPGTKLGIGPAIDD 104

Query: 103 GFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQ-YLSHEKARELFESKKEAYKVEI 161
           GFYYDFD  +PF+ D+L  +EK+M++II +   F++  Y S E+A E  + K E YK+E+
Sbjct: 105 GFYYDFDVAEPFTPDDLVTLEKRMKKIIKQGQKFVRGVYQSVEEAAE--DLKDEPYKLEL 162

Query: 162 LE--------SIPAKE----NVTLY-----RQGE--WFDLCRGPHVRSTGQVKKFFKLMK 202
           ++        S  A E    ++T Y     R GE  W DLCRGPHV +T  +  F  L +
Sbjct: 163 IQDKGNVDPDSDEATEVGAGDLTHYDNVNPRTGEVEWHDLCRGPHVPTTKYIPAF-ALTR 221

Query: 203 VAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED- 261
            + AYWRGD N   L RIYGTAW +++ L ++L+ L E+EKRDHR+L  EMDLF   ++ 
Sbjct: 222 SSAAYWRGDQNNAGLQRIYGTAWESKERLDEHLHMLREAEKRDHRRLGNEMDLFSFPDEL 281

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           GSG+  +H  G  I   +  + RR+ I+  Y  +NTP V    L+ +SGH D Y   MF 
Sbjct: 282 GSGLPVFHPDGGIIRLAMEDHSRRRHIEAGYSFVNTPHVTKGSLFSKSGHLDWYADGMFP 341

Query: 321 VKCAD-------DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP 373
               D       + +K  + + +KPMNCP H  +F+   +SYRELP+RL EFG+VYR E 
Sbjct: 342 PMKLDGEIDDDGNVVKQPQDYYVKPMNCPMHNLIFDSRGRSYRELPLRLFEFGTVYRYEK 401

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR-PE 432
           SG +HGL R RGFTQDDAH++CT++Q+  E   +   IIS+ KD+G     ++LST+ P+
Sbjct: 402 SGVIHGLTRARGFTQDDAHIYCTEDQLEAELTSVLEFIISLLKDYGLNDFYLELSTKDPQ 461

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL----GEGAFYGPKFEYILKDAIG 488
           K +G D +W  + +I++ V +           +G+ L       AFYGPK     +DAIG
Sbjct: 462 KYIGDDEIWQRSTDILQSVAE----------KSGLELVPDPAGAAFYGPKISVQARDAIG 511

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPL 548
           R WQ  T+Q+DFNLP RF+  Y      K  PVMIHRA+FGSIERF G+++E++ G  P 
Sbjct: 512 RTWQMSTVQLDFNLPERFDLTYTAPDGTKKRPVMIHRALFGSIERFFGVLLEHYAGAFPA 571

Query: 549 WLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIII 608
           WL+P Q +   +      +   +   L+   +  E D  ++ +  KIR H+  K+P +++
Sbjct: 572 WLAPHQVVGIPVADDFAGHLDSVTQKLRERGIRAEVDHSDDRMQKKIRNHTTSKVPFMLL 631

Query: 609 CGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            G ++    ++  R    T    V + +A+ I+
Sbjct: 632 AGARDVEADAVSFRFLDGTQVNGVPVAEAVDII 664


>gi|328710126|ref|XP_001950747.2| PREDICTED: threonyl-tRNA synthetase, cytoplasmic-like
           [Acyrthosiphon pisum]
          Length = 714

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 244/644 (37%), Positives = 377/644 (58%), Gaps = 22/644 (3%)

Query: 5   IKLTFPDGSIKNFPV-HATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
           I +TFPDG   N     +T  DVA+ IS+ LA   V   +NG++ DL  P+ ++ +++++
Sbjct: 75  ITVTFPDGKTTNAKAWQSTPYDVAKGISQGLADNTVIAKVNGELWDLDRPLEKDSTLQLL 134

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQ 121
             ++  +  V  HS AH++ EA++ I+    +  GP IE GFYYD F + +  S+ +   
Sbjct: 135 KIDNEEAQKVFWHSSAHMLGEAMERIYGGC-LCYGPPIEGGFYYDMFIENKGVSNFDFPV 193

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +E  +++I+    PF +  +S E   E+F  K   +KV IL         T+YR G   D
Sbjct: 194 MENLVKQIVKEKQPFERLEVSKEDLLEMF--KYNEFKVRILNEKVTTPTTTIYRCGPLID 251

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+R TG+VK F K++K +  YW G+S    L R+YG +++  +++ ++  F EE+
Sbjct: 252 LCRGPHIRHTGKVKAF-KVIKNSATYWEGNSTAETLQRVYGISFSDNKQMKEWEKFQEEA 310

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVL 300
            +RDHRK+ RE +LF   E   G  F+  KG  I+ TLI +++ +  K  ++E+ +P + 
Sbjct: 311 ARRDHRKIGREQELFFFHELSPGSCFFQPKGAHIYNTLIEFIKSEYRKRGFQEVVSPNIY 370

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  LWQ SGHW  Y  NMF+     +T      +ALKPMNCPGH  +F+H  +S+RELP+
Sbjct: 371 NVKLWQTSGHWAHYAENMFSFDVEKET------YALKPMNCPGHCLMFDHRNRSWRELPL 424

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+A+FG ++RNE SG+L GL RVR F QDDAH+FCT +Q+  E +   + +  +Y  FGF
Sbjct: 425 RMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCTTDQIGQEMMSSLDFLRHVYTVFGF 484

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
               ++LSTRPEK +G   +W++AE  +   L++        +N G    +GAFYGPK +
Sbjct: 485 -TFHLRLSTRPEKYLGELEMWENAEKQLADSLNSFGEPWT--LNPG----DGAFYGPKID 537

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
             + DA+ R  QC TIQ+DF LP RFN  +++   EK  PV+IHRA+FGS+ER I I+ E
Sbjct: 538 ITISDALKRQHQCATIQLDFQLPIRFNLNFISESGEKKRPVIIHRAIFGSVERMIAILTE 597

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF-RNETINYKIREHS 599
           +F G  P WLSP QAIV  +     EY++++   +       + D    +T+N KIR   
Sbjct: 598 SFAGKWPFWLSPRQAIVIPVGPQFDEYSEKVKKEIYEAGFMCDVDVDHGDTLNKKIRNAQ 657

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           + +   I++ GDKE +  ++ +R   +    + S+ + I  L K
Sbjct: 658 LAQYNFILVVGDKEKTANTVNVRTRDNNVHGEFSIEETIQRLQK 701


>gi|329939431|ref|ZP_08288767.1| threonyl-tRNA synthetase [Streptomyces griseoaurantiacus M045]
 gi|329301660|gb|EGG45554.1| threonyl-tRNA synthetase [Streptomyces griseoaurantiacus M045]
          Length = 666

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 252/648 (38%), Positives = 373/648 (57%), Gaps = 49/648 (7%)

Query: 19  VHATGSDVAESISRSLAKKAVAVAI------NGKVCDLS-DPVREGSIEIITPEDPRSLA 71
           V A G+   E++S +   ++   AI       G++ DL   P  +  +  +  ++P  L 
Sbjct: 14  VVAAGTTAGEAVSAAGLPESGPTAIVVVRDSAGRLRDLDWVPELDTKVTPVALDEPDGLN 73

Query: 72  VIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIA 131
           V+RHS AH++A+AVQ ++PE ++ IGP IE+GFYYDFD  +PF  D+L ++EK+MQEII 
Sbjct: 74  VLRHSTAHVLAQAVQDVFPEAKLGIGPPIENGFYYDFDVAKPFQPDDLKRLEKRMQEIIK 133

Query: 132 RDSPF-LKQYLSHEKARELFESKKEAYKVEILE---SIPAKE-------NVTLY-----R 175
           +   F  ++Y S E A++  +  KE YK+E+++    + A+E        +T Y     +
Sbjct: 134 QGQRFQRRRYDSLEDAKD--QLAKEPYKLELVDLKGEVDAEEVMEVGAGELTAYDNLDPK 191

Query: 176 QGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQ 233
            G   W DLCRGPH+ ST  +  F KLM+ A AYWRG+   P L RIYGTAW ++ EL  
Sbjct: 192 DGHRVWGDLCRGPHLPSTRHIPAF-KLMRSAAAYWRGNERNPQLQRIYGTAWPSRDELKA 250

Query: 234 YLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD-DY 291
           YL  LEE+ +RDHRKL  E+DLF   ++ GSG+  +H KG  + + + +Y R K ++  Y
Sbjct: 251 YLKLLEEASRRDHRKLGAELDLFSFPDEIGSGLAVFHPKGGIVRREMENYSRVKHEEAGY 310

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFA---VKCADDTIKDLRTFALKPMNCPGHVAVF 348
             +N+P +    L++ SGH   Y   MF    ++ AD        + LKPMNCP H  +F
Sbjct: 311 SFVNSPHITKGKLFETSGHLPYYADTMFPPIEMEGAD--------YYLKPMNCPFHNLIF 362

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
               +SYRELP+RL EFG+VYR E SG +HGL RVRG T DD+H++CT+EQM  E   + 
Sbjct: 363 KSRGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRVRGLTMDDSHIYCTREQMAGELTSLL 422

Query: 409 NLIISIYKDFGFEKIMVKLSTRPE--KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
             ++++ +D+G +   ++LSTR +  K +GSD  W++A   ++        +++  +   
Sbjct: 423 RFVLALLRDYGLDDFYLELSTRDDSPKFIGSDEDWEEATEALRSA------AAESGLELV 476

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
              G  AFYGPK     KDAIGR WQ  TIQVDFN P RF   Y  ++  +  PVMIHRA
Sbjct: 477 PDPGGAAFYGPKISVQAKDAIGRTWQMSTIQVDFNQPKRFGLEYSAANGGREQPVMIHRA 536

Query: 527 VFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF 586
           +FGSIERF G++ E++ G  P WL+P+Q +   I     +Y  E    L+ H +  E D 
Sbjct: 537 LFGSIERFFGVLTEHYAGAFPAWLAPVQVVGIPIREDHADYLAEFVAKLREHGIRAEVDH 596

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
            ++ +  KIR    +KIP + I GD + +  ++  R    +    V L
Sbjct: 597 SDDRMQKKIRTAQQQKIPFMAIAGDDDVNGGTVSFRYRDGSQRNGVPL 644


>gi|289705559|ref|ZP_06501951.1| threonine--tRNA ligase [Micrococcus luteus SK58]
 gi|289557788|gb|EFD51087.1| threonine--tRNA ligase [Micrococcus luteus SK58]
          Length = 672

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 257/679 (37%), Positives = 378/679 (55%), Gaps = 56/679 (8%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIE 60
           P +I LT  DG ++      TG D    + R     AV + ++G + DL+  +  G S+E
Sbjct: 4   PKNILLTV-DGELREVTHGTTGLD----LFREKPTTAV-MRVDGLLWDLAREIPAGASVE 57

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            +   +P  L V+RHS AH+MA+AVQ + P  ++ +GP I DGFY+DFD ++PF+ ++L 
Sbjct: 58  SVDITEPEGLEVLRHSTAHVMAQAVQQLRPGAKLGVGPYITDGFYFDFDVDEPFTPEDLK 117

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN---------- 170
           QI   MQ+I+     F ++ +  E AR   E   E YK+E+L    A +           
Sbjct: 118 QISSLMQKIVKSGQTFRRRVVDEETARA--EMADEPYKLELLGKKDAADTAGEGASVEVG 175

Query: 171 ---VTLY-----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRI 220
              +T+Y     + G+  W DLCRGPH+ ST  +   F L + A AYW G+     L RI
Sbjct: 176 AGEITVYDNVDRKTGDAVWCDLCRGPHLPSTKLIGNGFALTRSAAAYWLGNEKNKQLQRI 235

Query: 221 YGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTL 279
           YGTAW ++ +L  Y   L E+E+RDHRKL  E+DLF   ++ GSG+  +H +G  I + +
Sbjct: 236 YGTAWASKDDLKAYQERLAEAERRDHRKLGAELDLFSFPDELGSGLPVFHPRGGIIRKEM 295

Query: 280 ISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT----- 333
             Y RR+  +  YE + TP +  QHL++ SGH D Y   MF     D+ ++D  T     
Sbjct: 296 EDYSRRRHTEAGYEFVYTPHITKQHLYEVSGHLDWYADGMFPPMHIDE-VRDPETGEITR 354

Query: 334 ----FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
               + LKPMNCP H  ++    +SYRELP+RL EFGSVYR E SG +HGL RVRG TQD
Sbjct: 355 QGQNYYLKPMNCPMHNLIYRSRGRSYRELPLRLFEFGSVYRYEKSGVVHGLTRVRGMTQD 414

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR-PEKRVGSDALWDDAENIM 448
           DAH++CT+EQM  E     N ++ + KD+G     ++LST+ PEK VGSD +W++A   +
Sbjct: 415 DAHIYCTREQMKEELTTTLNFVLDLLKDYGLNDFYLELSTKDPEKFVGSDEIWEEATRTL 474

Query: 449 KGVLDTIKNSSQDRINTGVLL----GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPS 504
             V +           +G+ L    G  AFYGPK     +DAIGR WQ  TIQ+DFNLP 
Sbjct: 475 AEVAEA----------SGLQLVPDPGGAAFYGPKISVQARDAIGRTWQMSTIQLDFNLPE 524

Query: 505 RFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA 564
           RF+  Y  +   +  PVMIHRA+FGSIERF+G++ E++ G  P WL+P Q +   +  + 
Sbjct: 525 RFDLEYQAADGTRQRPVMIHRALFGSIERFLGVLTEHYAGAFPAWLAPEQVVAIPVAEAF 584

Query: 565 VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRF 624
            +Y  ++   L++  +    D  ++    KIR  + +K P ++I G ++    ++  R  
Sbjct: 585 NDYLDDVVAKLRAEGIRARLDDSSDRFPKKIRTAAKEKAPFVLIAGGEDREANAVSFRFR 644

Query: 625 GSTTTQKVSLLDAIPILTK 643
             T    V + +AI  + K
Sbjct: 645 DGTQDNGVPVEEAIERIVK 663


>gi|222480176|ref|YP_002566413.1| threonyl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239]
 gi|222453078|gb|ACM57343.1| threonyl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239]
          Length = 649

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 238/626 (38%), Positives = 368/626 (58%), Gaps = 21/626 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEI 61
           +D+ +  PDG+  + P  AT  DVA  I   L +  VA  I+G++ +    V +G+ IEI
Sbjct: 8   ADVTVVLPDGAELDVPAGATVEDVAFEIGPGLGRDTVAGKIDGELVEKYATVHDGARIEI 67

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +T +    L V+RHS AH+ A+A+Q + PE  + IGP  ++GFYYD         D  A 
Sbjct: 68  VTDQSDEYLTVLRHSAAHVFAQALQRLHPEATLTIGPPTDEGFYYDVTDVDLDEDDLDA- 126

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE++M EIIA D    ++  S E+A+E++   +  YK++IL+     E VT Y Q +W D
Sbjct: 127 IEEEMDEIIAADYDIEREVRSREEAKEIYADNE--YKLQILDEEADDEEVTFYVQDDWQD 184

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LC+GPHV STG++     L++V+ AYWRGD +   L+R+YGTA+ ++ +L ++L   EE+
Sbjct: 185 LCQGPHVESTGEIGAT-TLLEVSAAYWRGDEDNDTLTRVYGTAFASESDLKEHLELREEA 243

Query: 242 EKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQV 299
            +RDHRK+ +EM+LF I    G G+  +H  G  + + L ++     +++ YEE+ TP V
Sbjct: 244 LERDHRKIGQEMNLFSIPTVTGPGLPLYHPPGKTVLRELSNFANELNRENGYEEVETPHV 303

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               LW++SGH+++Y+ +MF +   D+       + LKPMNCPGH  +F+    SYR+LP
Sbjct: 304 FRTELWKKSGHYENYKDDMFLLDVNDEE------YGLKPMNCPGHATIFDQQSWSYRDLP 357

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
            R  E G VYR E  G L GL RV  FT DD H+F   +Q+  E   +  +I  + +   
Sbjct: 358 QRYFENGKVYRKEQRGELSGLSRVWSFTIDDGHLFVRPDQIRQEIESVIEMIFEVVETLD 417

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
            + + V L+TRP+K VG D +W+ AE  ++ VL++            V  G+GAFYGPK 
Sbjct: 418 LD-VEVALATRPDKSVGGDEIWESAEEQLRDVLESGGYEYD------VEPGDGAFYGPKI 470

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           ++  +DA+GR W   T+Q+DFN+P RF+  Y    +E   PVMIHRA++GS ERF  ++I
Sbjct: 471 DFGFEDALGRVWDGPTVQLDFNMPDRFDLTYTGEDNEDHQPVMIHRALYGSYERFFMVLI 530

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E+F G+ PLWL+P Q  +  ++   + YA  + N L+     +E + R+ T+  KIR   
Sbjct: 531 EHFDGDFPLWLAPEQVRILPVSDETLGYAHRVKNELEDAGFRVEVEDRDWTVGRKIRAGH 590

Query: 600 IKKIPIIIICGDKEASERSIGIR-RF 624
             ++P ++I G+ E    ++ +R RF
Sbjct: 591 DDRLPYMVIVGEDEQEAGTVSVRDRF 616


>gi|148508028|gb|ABQ75826.1| threonine--tRNA ligase [uncultured haloarchaeon]
          Length = 643

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 244/636 (38%), Positives = 365/636 (57%), Gaps = 23/636 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEI 61
           S+I +T PDG+  +    AT  DVA  I   L +  +A  ++G++ +   PV +G+ IEI
Sbjct: 2   SEIVVTLPDGAELSVSKGATVEDVAYEIGPGLGRDTIAGKVDGELVEKQTPVYDGARIEI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +T +      V+RHS AH+ A+A++ ++PE  + IGP  ++GF+YD           +  
Sbjct: 62  VTDQSDEYRRVLRHSAAHVFAQALKRLYPEALLTIGPPTDEGFHYDI-ANVDLDESAVDD 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWF 180
           IE +M++II  D P  +   + E+A E++   +  YK +IL++  A E+ V+ Y+Q E+ 
Sbjct: 121 IEAEMKDIIDADYPIERMTKTREEAFEIYADNQ--YKRDILQTEAADEDEVSFYQQDEFI 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLC GPHV STG +     L+ ++ AYWRG+ +  ML R+ GTA+ T+  L  YL   E+
Sbjct: 179 DLCEGPHVESTGDIGAV-TLLSISSAYWRGNEDNDMLVRVSGTAFETEGALEAYLERREK 237

Query: 241 SEKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           +++RDHRK+ +E++LF I +  G G+  +H  G KI   L SY     +   YE + TP 
Sbjct: 238 AKERDHRKIGQELELFSIPDVTGPGLPLYHPNGKKILNELSSYAESLNVDAGYEPVETPH 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW+ SGH+++Y  +MF +  +DD       + LKPMNCPGH  +FN    SYR+L
Sbjct: 298 LFKTELWKVSGHYENYVDDMFLLDVSDDE------YGLKPMNCPGHATIFNQQSWSYRDL 351

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           PVR  E G VYR E  G L GL RV  FT DD H+FCT EQ+  E  ++   I  +   F
Sbjct: 352 PVRYYEDGKVYRKEQRGELSGLSRVWAFTIDDGHLFCTPEQIEQEVTQVIESIQEVLNTF 411

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           G +   V L+TRPEK VGSD +W  AE+ ++ VL      +   IN  +  G+GAFYGPK
Sbjct: 412 GLDA-EVALATRPEKSVGSDEIWQQAESQLETVL------TSRGINYDLEPGDGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++  +DA+GR+W   T+Q+DFN+P RF+  Y    ++   PVMIHRA++GS ERF  ++
Sbjct: 465 IDFAFEDALGRNWDGPTVQLDFNMPDRFDLSYTGEDNQDHQPVMIHRALYGSYERFFMVL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+F G  PLWL+P Q  +  I+   + YA  + N        +E D +  T++ KIR  
Sbjct: 525 IEHFDGKFPLWLAPEQIRILPISDDQLGYAHRVKNQFDD--FRVEIDDQTRTLSRKIRAG 582

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
              +IP +II G  E    +I +R       Q V++
Sbjct: 583 QDDRIPYMIILGSDEEEAGTISVRDRFENEKQDVNI 618


>gi|84391304|ref|ZP_00991635.1| threonyl-tRNA synthetase [Vibrio splendidus 12B01]
 gi|84376593|gb|EAP93471.1| threonyl-tRNA synthetase [Vibrio splendidus 12B01]
          Length = 460

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 216/454 (47%), Positives = 314/454 (69%), Gaps = 11/454 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  DVA SI   LAK  +A  ++G+  D  D +  + S+EIIT +
Sbjct: 4   ITLPDGSQRQFDNPVSTLDVALSIGPGLAKATIAGRVDGERVDACDLIENDASLEIITAK 63

Query: 66  DP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  A++ ++PE ++AIGP I++GFYYD D E   + ++L +I+K
Sbjct: 64  DEVDGLEIVRHSCAHLLGHAIKQLFPEAKMAIGPTIDNGFYYDIDLEHSLTQEDLEKIDK 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLC 183
           +M+E+       +K+ +S ++AR+ FE++ EAYK+EIL E++   +   LY   E+ D+C
Sbjct: 124 RMKELAKTKYQVVKKKVSWQEARDAFEARGEAYKIEILDENVSKDDRPGLYHHEEYIDMC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV   G   + F L+ VAGAYWRG+S+  ML RIYGTA++ ++ L  +L  LEE+ K
Sbjct: 184 RGPHVPHMG-FCQHFTLLNVAGAYWRGNSDNKMLQRIYGTAFHDKKALKAHLVRLEEAAK 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRK+ + +DLFH+ ++  G++FWH  GW IF+ L  ++R+K+ + DY+E+  P ++D+
Sbjct: 243 RDHRKIGKHLDLFHMQQEAPGMVFWHHNGWTIFRELEVFIRQKLTEYDYQEVKGPLMMDR 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+
Sbjct: 303 VLWERSGHWDKYAEAMFT------TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRM 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHG+MRVRGFTQDDAHVFCT++Q+  E      ++   Y  FGFE 
Sbjct: 357 AEFGSCHRNEPSGALHGIMRVRGFTQDDAHVFCTEDQVQQEVKACIEMVYDTYTTFGFEN 416

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIK 456
           I+VKLSTRPE+RVGSD +WD AE  +K  L+ ++
Sbjct: 417 IVVKLSTRPEQRVGSDEMWDRAEADLKQALEAME 450


>gi|171742906|ref|ZP_02918713.1| hypothetical protein BIFDEN_02023 [Bifidobacterium dentium ATCC
           27678]
 gi|171278520|gb|EDT46181.1| hypothetical protein BIFDEN_02023 [Bifidobacterium dentium ATCC
           27678]
          Length = 708

 Score =  454 bits (1169), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 246/634 (38%), Positives = 363/634 (57%), Gaps = 45/634 (7%)

Query: 36  KKAVAVAINGKVCDLSDPVREGSI-EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           K  +AV +NG+  DL   + +G + E I  +    +A++RHS  H+MA+AVQ I P+ ++
Sbjct: 62  KNIIAVRLNGEPRDLYTELHDGDVVEPIALDSEDGVAIMRHSATHVMAQAVQEIRPDAKL 121

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            +GP+I+DGFYYDFD  +PF+ ++L  IEK+MQ II     F ++ +S ++A  L E   
Sbjct: 122 GVGPVIKDGFYYDFDVVEPFTPEDLKDIEKRMQRIIKSSQSFRRRVVSEQEA--LAEEAD 179

Query: 155 EAYKVEILESIPA-----------KENVTLY----RQGE--WFDLCRGPHVRSTGQVKKF 197
           + YK+E+++   A           ++ ++ Y    R G   W DLCRGPH+ +T  +K F
Sbjct: 180 QPYKLELIKDKEAHLDPEAATEISEKELSFYDNIDRDGNVVWKDLCRGPHLPNTRYIKAF 239

Query: 198 FKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFH 257
            K+ + A AYWRG+   PML RIYG A+ T+++L  Y   LEE+ KRDHRKL  EMDLF 
Sbjct: 240 -KIERSAAAYWRGNEANPMLQRIYGAAFATKEDLKAYQTRLEEAAKRDHRKLGAEMDLFS 298

Query: 258 IAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYR 315
             ++ G G+  +H KG  +   +  Y R    K  Y  + TP +    L++ SGH   Y+
Sbjct: 299 FPDEIGPGLAVFHPKGAAVINAMEDYSREMHRKHHYSFVQTPHITKGGLYETSGHLHWYK 358

Query: 316 ANMFAVKCAD-------DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV 368
             M+     D       + IK    + LKPMNCP H  +F    +SYRELP+RL EFG+V
Sbjct: 359 DGMYPAMRLDEEKDENGNIIKQGFDYYLKPMNCPMHNLIFKSRQRSYRELPLRLFEFGTV 418

Query: 369 YRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLS 428
           YR E SG +HGL RVRG TQDD+H++CT+EQM +E   +   ++ + KDFG +   ++LS
Sbjct: 419 YRYEKSGEVHGLTRVRGLTQDDSHIYCTREQMKDELKNLLTFVLGLLKDFGLDDFYLELS 478

Query: 429 TR-PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAI 487
           T+ P K VGSD +W++A N +  V    K S  + ++        AFYGPK     +DAI
Sbjct: 479 TKDPHKYVGSDEIWEEATNTLAEV---AKESGLELVDDPC---GAAFYGPKISVQARDAI 532

Query: 488 GRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           GR WQ  TIQ+DFNLP RF   Y+ +      PVMIHRA+FGSIERF  +++E++ G  P
Sbjct: 533 GRTWQVSTIQLDFNLPERFKLEYIAADGTHQRPVMIHRALFGSIERFFAVLLEHYAGAFP 592

Query: 548 LWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIII 607
            WL+P+Q +   +      + Q     L+   +  E D  ++    KIR  S  K+P I+
Sbjct: 593 AWLAPVQVLGVPVADEFAPHLQRFIASLEEETVRCEIDMSDDRFGKKIRNASKSKVPFIL 652

Query: 608 ICGDKEASERSIGIR-RFGSTTTQKVSLLDAIPI 640
           I G+++ +  ++  R R GS        L+ +P+
Sbjct: 653 IVGEEDMNNNAVSFRFRDGSQ-------LNGVPV 679


>gi|227495497|ref|ZP_03925813.1| threonine--tRNA ligase [Actinomyces coleocanis DSM 15436]
 gi|226831044|gb|EEH63427.1| threonine--tRNA ligase [Actinomyces coleocanis DSM 15436]
          Length = 665

 Score =  454 bits (1169), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 253/674 (37%), Positives = 376/674 (55%), Gaps = 52/674 (7%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
           +DI++   DG  K      TG D   S      K+ +A+ ++G   DLS  +  +  I+ 
Sbjct: 2   ADIQVVI-DGEEKQIAAGLTGLDYYAS-----EKEIIAMYVDGVETDLSAEIPADAEIKG 55

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           I       LA++RHSC H+MA+AVQ + P+V + IGP + DGFYYDF   +PF+ ++L +
Sbjct: 56  ININSDAGLAILRHSCTHVMAQAVQQLNPQVDLGIGPPVTDGFYYDFGNVEPFTPEDLKE 115

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-----------EN 170
           IEK M+ I+     F+++ ++ E+AR   E   + +K+ ++ +  +              
Sbjct: 116 IEKVMKRIVKEGQSFVRRVVTEEEARA--ELADQPHKLHLIGAKGSDLGEGAAVEVGGGE 173

Query: 171 VTLY----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTA 224
           +T+Y    R GE  W DLCRGPH+ +T  +   F LMK + AYW G+     L RIYGTA
Sbjct: 174 LTIYDNVRRNGEVAWSDLCRGPHIPNTKLIGNGFALMKTSAAYWLGNQKNAQLQRIYGTA 233

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM 283
           W T++EL  YL+ L E+EKRDHRKL  E+DLF   ++ GSG+  +H KG  I   +  Y 
Sbjct: 234 WPTKEELAAYLHRLSEAEKRDHRKLGTELDLFSFPDEIGSGLACFHPKGGIIRMEMEEYS 293

Query: 284 R-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADD--------TIKDLRTF 334
           R R ++  Y+ + +P +    L+++SGH   Y+  M+     D+          K  + +
Sbjct: 294 RKRHVQAGYDFVYSPHITKGALFEKSGHLSWYKDGMYPALSIDEERNPETGEITKAGQDY 353

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
            LKPMNCP H  +F    +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDDAH++
Sbjct: 354 YLKPMNCPMHNLIFASRGRSYRELPLRLFEFGTVYRYEKSGVVHGLARGRGFTQDDAHIY 413

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR-VGSDALWDDAENIMKGVLD 453
           CT+EQM +E   +   ++ + KD+G     ++LST+ E++ VG DA W++A   +  V +
Sbjct: 414 CTREQMKDELTSLLTFVLDLLKDYGLNDFYLELSTKNEEKFVGDDATWEEATRTLAEVAE 473

Query: 454 TIKNSSQDRINTGVLL----GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAF 509
                      +G+ L    G  AFYGPK     KDAIGR WQ  TIQ+DFNLP RF   
Sbjct: 474 A----------SGLQLVPDPGGAAFYGPKISVQAKDAIGRTWQMSTIQLDFNLPERFELE 523

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQ 569
           Y      +  PVMIHRA+FGSIERF  ++ E++ G  P WL+P+Q     +     +Y +
Sbjct: 524 YTAPDGTRQRPVMIHRALFGSIERFFAVLTEHYAGAFPAWLAPVQVRCIPVAEKFEDYLE 583

Query: 570 EIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           EIA  L++  + +E D  ++    KIR  S  K+P  +I G  +    ++  R    +  
Sbjct: 584 EIAKQLRAEGVRVEIDRSDDRFGKKIRNASKDKVPFTLIAGGDDVDANAVSFRLRDGSQD 643

Query: 630 QKVSLLDAIP-ILT 642
            +V + +A+  ILT
Sbjct: 644 NQVPVAEAVERILT 657


>gi|306822719|ref|ZP_07456097.1| threonine--tRNA ligase [Bifidobacterium dentium ATCC 27679]
 gi|304554264|gb|EFM42173.1| threonine--tRNA ligase [Bifidobacterium dentium ATCC 27679]
          Length = 708

 Score =  454 bits (1169), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 246/634 (38%), Positives = 363/634 (57%), Gaps = 45/634 (7%)

Query: 36  KKAVAVAINGKVCDLSDPVREGSI-EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           K  +AV +NG+  DL   + +G + E I  +    +A++RHS  H+MA+AVQ I P+ ++
Sbjct: 62  KNIIAVRLNGEPRDLYTELHDGDVVEPIALDSEDGVAIMRHSATHVMAQAVQEIRPDAKL 121

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            +GP+I+DGFYYDFD  +PF+ ++L  IEK+MQ II     F ++ +S ++A  L E   
Sbjct: 122 GVGPVIKDGFYYDFDVVEPFTPEDLKDIEKRMQRIIKSSQSFRRRVVSEQEA--LAEEAD 179

Query: 155 EAYKVEILESIPA-----------KENVTLY----RQGE--WFDLCRGPHVRSTGQVKKF 197
           + YK+E+++   A           ++ ++ Y    R G   W DLCRGPH+ +T  +K F
Sbjct: 180 QPYKLELIKDKEAHLDPEAATEISEKELSFYDNVDRDGNVVWKDLCRGPHLPNTRYIKAF 239

Query: 198 FKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFH 257
            K+ + A AYWRG+   PML RIYG A+ T+++L  Y   LEE+ KRDHRKL  EMDLF 
Sbjct: 240 -KIERSAAAYWRGNEANPMLQRIYGAAFATKEDLKAYQTRLEEAAKRDHRKLGAEMDLFS 298

Query: 258 IAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYR 315
             ++ G G+  +H KG  +   +  Y R    K  Y  + TP +    L++ SGH   Y+
Sbjct: 299 FPDEIGPGLAVFHPKGAAVINAMEDYSREMHRKHHYSFVQTPHITKGGLYETSGHLHWYK 358

Query: 316 ANMFAVKCAD-------DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV 368
             M+     D       + IK    + LKPMNCP H  +F    +SYRELP+RL EFG+V
Sbjct: 359 DGMYPAMRLDEEKDENGNIIKQGFDYYLKPMNCPMHNLIFKSRQRSYRELPLRLFEFGTV 418

Query: 369 YRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLS 428
           YR E SG +HGL RVRG TQDD+H++CT+EQM +E   +   ++ + KDFG +   ++LS
Sbjct: 419 YRYEKSGEVHGLTRVRGLTQDDSHIYCTREQMKDELKNLLTFVLGLLKDFGLDDFYLELS 478

Query: 429 TR-PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAI 487
           T+ P K VGSD +W++A N +  V    K S  + ++        AFYGPK     +DAI
Sbjct: 479 TKDPHKYVGSDEIWEEATNTLAEV---AKESGLELVDDPC---GAAFYGPKISVQARDAI 532

Query: 488 GRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           GR WQ  TIQ+DFNLP RF   Y+ +      PVMIHRA+FGSIERF  +++E++ G  P
Sbjct: 533 GRTWQVSTIQLDFNLPERFKLEYIAADGTHQRPVMIHRALFGSIERFFAVLLEHYAGAFP 592

Query: 548 LWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIII 607
            WL+P+Q +   +      + Q     L+   +  E D  ++    KIR  S  K+P I+
Sbjct: 593 AWLAPVQVLGVPVADEFAPHLQRFIASLEEETVRCEIDMSDDRFGKKIRNASKSKVPFIL 652

Query: 608 ICGDKEASERSIGIR-RFGSTTTQKVSLLDAIPI 640
           I G+++ +  ++  R R GS        L+ +P+
Sbjct: 653 IVGEEDMNNNAVSFRFRDGSQ-------LNGVPV 679


>gi|317181405|dbj|BAJ59189.1| threonyl-tRNA synthetase [Helicobacter pylori F57]
          Length = 612

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 237/591 (40%), Positives = 357/591 (60%), Gaps = 37/591 (6%)

Query: 44  NGKVCDLSDPVR--EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE 101
           + KV  LSD ++   G+  I   + P +L VIRHSCAH++A+++++++P+ +  +GP++E
Sbjct: 19  SAKVLGLSDGIKALNGTEPIYFDDSPLALEVIRHSCAHLLAQSLKALYPDAKFFVGPVVE 78

Query: 102 DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEI 161
           +GFYYDF      S ++L +IE KM+E         K+ L+ E+A E F  K +  K  +
Sbjct: 79  EGFYYDFKTASKISEEDLPKIEAKMKEFAKLKLAITKEVLTREQALERF--KGDELKHAV 136

Query: 162 LESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIY 221
           +  I   +   +Y+QGE+ DLC+GPH+ +T +    FKL K+AGAY  GD N  ML RIY
Sbjct: 137 MSKISG-DKFGVYQQGEFEDLCKGPHLPNT-RFLNHFKLTKLAGAYLGGDENNEMLIRIY 194

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLI 280
           G A+ T++ L  YL+ +EE++KRDHRKL  E+ LF   ++ G+G+  W  KG +      
Sbjct: 195 GIAFATKEGLKDYLFQIEEAKKRDHRKLGVELGLFSFDDEIGAGLPLWLPKGAR------ 248

Query: 281 SYMRRKIKD---------DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
             +R++I+D          YE +  P++L   +W+ SGH+D+Y+ NM+       T  D 
Sbjct: 249 --LRKRIEDLLSKALLLRGYEPVKGPEILKSDVWKISGHYDNYKENMYF------TTIDE 300

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
           + + +KPMNC GH+ V+   L SYR+LP+R  E+G V+R+E SG LHGL+RVR FTQDDA
Sbjct: 301 QEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDA 360

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
           H+FC+ EQ+ +E   I +    I + F F   M +LSTRP K +G D +W+ A N +K  
Sbjct: 361 HIFCSFEQIQSEVSAILDFTHKIMQAFDFSYEM-ELSTRPAKSIGDDKVWEKATNALKEA 419

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
           L       + RI+  +  G GAFYGPK +  + DA+ R WQCGTIQVD NLP RF   + 
Sbjct: 420 L------KEHRIDYKIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDMNLPERFKLAFT 473

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
           N H+    PVMIHRA+ GS ERFI I+ E+F GN P +++P Q  +  I      +A ++
Sbjct: 474 NEHNHAEQPVMIHRAILGSFERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHAFALKL 533

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
              LK   + +E   +N+++N K+R    +KIP+I++ G++E     + IR
Sbjct: 534 KEALKKRDIFVEVLDKNDSLNKKVRLAEKQKIPMILVLGNEEVETEILSIR 584


>gi|309800860|ref|ZP_07694992.1| threonine--tRNA ligase [Bifidobacterium dentium JCVIHMP022]
 gi|308222396|gb|EFO78676.1| threonine--tRNA ligase [Bifidobacterium dentium JCVIHMP022]
          Length = 677

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 246/634 (38%), Positives = 363/634 (57%), Gaps = 45/634 (7%)

Query: 36  KKAVAVAINGKVCDLSDPVREGSI-EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           K  +AV +NG+  DL   + +G + E I  +    +A++RHS  H+MA+AVQ I P+ ++
Sbjct: 31  KNIIAVRLNGEPRDLYTELHDGDVVEPIALDSEDGVAIMRHSATHVMAQAVQEIRPDAKL 90

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            +GP+I+DGFYYDFD  +PF+ ++L  IEK+MQ II     F ++ +S ++A  L E   
Sbjct: 91  GVGPVIKDGFYYDFDVVEPFTPEDLKDIEKRMQRIIKSSQSFRRRVVSEQEA--LAEEAD 148

Query: 155 EAYKVEILESIPA-----------KENVTLY----RQGE--WFDLCRGPHVRSTGQVKKF 197
           + YK+E+++   A           ++ ++ Y    R G   W DLCRGPH+ +T  +K F
Sbjct: 149 QPYKLELIKDKEAHLDPEAATEISEKELSFYDNVDRDGNVVWKDLCRGPHLPNTRYIKAF 208

Query: 198 FKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFH 257
            K+ + A AYWRG+   PML RIYG A+ T+++L  Y   LEE+ KRDHRKL  EMDLF 
Sbjct: 209 -KIERSAAAYWRGNEANPMLQRIYGAAFATKEDLKAYQTRLEEAAKRDHRKLGAEMDLFS 267

Query: 258 IAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYR 315
             ++ G G+  +H KG  +   +  Y R    K  Y  + TP +    L++ SGH   Y+
Sbjct: 268 FPDEIGPGLAVFHPKGAAVINAMEDYSREMHRKHHYSFVQTPHITKGGLYETSGHLHWYK 327

Query: 316 ANMFAVKCAD-------DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV 368
             M+     D       + IK    + LKPMNCP H  +F    +SYRELP+RL EFG+V
Sbjct: 328 DGMYPAMRLDEEKDENGNIIKQGFDYYLKPMNCPMHNLIFKSRQRSYRELPLRLFEFGTV 387

Query: 369 YRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLS 428
           YR E SG +HGL RVRG TQDD+H++CT+EQM +E   +   ++ + KDFG +   ++LS
Sbjct: 388 YRYEKSGEVHGLTRVRGLTQDDSHIYCTREQMKDELKNLLTFVLGLLKDFGLDDFYLELS 447

Query: 429 TR-PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAI 487
           T+ P K VGSD +W++A N +  V    K S  + ++        AFYGPK     +DAI
Sbjct: 448 TKDPHKYVGSDEIWEEATNTLAEV---AKESGLELVDDPC---GAAFYGPKISVQARDAI 501

Query: 488 GRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           GR WQ  TIQ+DFNLP RF   Y+ +      PVMIHRA+FGSIERF  +++E++ G  P
Sbjct: 502 GRTWQVSTIQLDFNLPERFKLEYIAADGTHQRPVMIHRALFGSIERFFAVLLEHYAGAFP 561

Query: 548 LWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIII 607
            WL+P+Q +   +      + Q     L+   +  E D  ++    KIR  S  K+P I+
Sbjct: 562 AWLAPVQVLGVPVADEFAPHLQRFIASLEEETVRCEIDMSDDRFGKKIRNASKSKVPFIL 621

Query: 608 ICGDKEASERSIGIR-RFGSTTTQKVSLLDAIPI 640
           I G+++ +  ++  R R GS        L+ +P+
Sbjct: 622 IVGEEDMNNNAVSFRFRDGSQ-------LNGVPV 648


>gi|317013544|gb|ADU80980.1| threonyl-tRNA synthetase [Helicobacter pylori Gambia94/24]
          Length = 612

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 238/591 (40%), Positives = 358/591 (60%), Gaps = 37/591 (6%)

Query: 44  NGKVCDLSDPVR--EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE 101
           + KV  LSD ++  +GS  I   + P +L VIRHSCAH++A+++++++P+ +  +GP++E
Sbjct: 19  SAKVLGLSDGIKALKGSEPIFFDDSPLALEVIRHSCAHLLAQSLKALYPDAKFFVGPVVE 78

Query: 102 DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEI 161
           +GFYYDF      S ++L +IE KM+E         K+ L+ E+A E F  K +  K  +
Sbjct: 79  EGFYYDFKTSSKISEEDLPKIEAKMKEFAKLKLAITKEVLTREQALERF--KGDELKHAV 136

Query: 162 LESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIY 221
           +  I   +   +Y+QGE+ DLC+GPH+ +T +    FKL K+AGAY  GD N  ML RIY
Sbjct: 137 MSKISG-DAFGVYKQGEFEDLCKGPHLPNT-RFLNHFKLTKLAGAYLGGDENNEMLIRIY 194

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLI 280
           G A+ T++ L  YL+ +EE++KRDHRKL  E+ LF   ++ G+G+  W  KG +      
Sbjct: 195 GIAFATKEGLKDYLFQIEEAKKRDHRKLGVELGLFSFDDEIGAGLPIWLPKGAR------ 248

Query: 281 SYMRRKIKD---------DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
             +R++I+D          YE +  P++L   +W+ SGH+D+Y+ NM+       T  D 
Sbjct: 249 --LRKRIEDLLSEALLLRGYEPVKGPEILKSDVWKISGHYDNYKENMYF------TTIDE 300

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
           + + +KPMNC GH+ V+   L SYR+LP+R  E+G V+R+E SG LHGL+RVR FTQDDA
Sbjct: 301 QEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDA 360

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
           H+FC+ EQ+ +E   I +    I + F F   M +LSTRP K +G D +W+ A N +K  
Sbjct: 361 HIFCSFEQIQSEVSAILDFTHKIMQAFDFSYEM-ELSTRPAKSIGDDEVWEKATNALKEA 419

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
           L       + RI+  +  G GAFYGPK +  + DA+ R WQCGTIQVD NLP RF   + 
Sbjct: 420 L------KEHRIDYKIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDMNLPERFKLAFT 473

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
           N H+    PVMIHRA+ GS ERFI I+ E+F GN P +++P Q  +  I      +A ++
Sbjct: 474 NEHNHAEQPVMIHRAILGSFERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHVFALKL 533

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
              LK   + +E   +N+++N K+R    +KIP+I++ G++E     + IR
Sbjct: 534 KEELKKRDIFVEALDKNDSLNKKVRLAEKQKIPMILVLGNEEMETEILSIR 584


>gi|283456070|ref|YP_003360634.1| ThrS Threonyl-tRNA synthetase [Bifidobacterium dentium Bd1]
 gi|283102704|gb|ADB09810.1| ThrS Threonyl-tRNA synthetase [Bifidobacterium dentium Bd1]
          Length = 677

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 246/634 (38%), Positives = 363/634 (57%), Gaps = 45/634 (7%)

Query: 36  KKAVAVAINGKVCDLSDPVREGSI-EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           K  +AV +NG+  DL   + +G + E I  +    +A++RHS  H+MA+AVQ I P+ ++
Sbjct: 31  KNIIAVRLNGEPRDLYTELHDGDVVEPIALDSEDGVAIMRHSATHVMAQAVQEIRPDAKL 90

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            +GP+I+DGFYYDFD  +PF+ ++L  IEK+MQ II     F ++ +S ++A  L E   
Sbjct: 91  GVGPVIKDGFYYDFDVVEPFTPEDLKDIEKRMQRIIKSSQSFRRRVVSEQEA--LAEEAD 148

Query: 155 EAYKVEILESIPA-----------KENVTLY----RQGE--WFDLCRGPHVRSTGQVKKF 197
           + YK+E+++   A           ++ ++ Y    R G   W DLCRGPH+ +T  +K F
Sbjct: 149 QPYKLELIKDKEAHLDPEAATEISEKELSFYDNIDRDGNVVWKDLCRGPHLPNTRYIKAF 208

Query: 198 FKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFH 257
            K+ + A AYWRG+   PML RIYG A+ T+++L  Y   LEE+ KRDHRKL  EMDLF 
Sbjct: 209 -KIERSAAAYWRGNEANPMLQRIYGAAFATKEDLKAYQTRLEEAAKRDHRKLGAEMDLFS 267

Query: 258 IAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYR 315
             ++ G G+  +H KG  +   +  Y R    K  Y  + TP +    L++ SGH   Y+
Sbjct: 268 FPDEIGPGLAVFHPKGAAVINAMEDYSREMHRKHHYSFVQTPHITKGGLYETSGHLHWYK 327

Query: 316 ANMFAVKCAD-------DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV 368
             M+     D       + IK    + LKPMNCP H  +F    +SYRELP+RL EFG+V
Sbjct: 328 DGMYPAMRLDEEKDENGNIIKQGFDYYLKPMNCPMHNLIFKSRQRSYRELPLRLFEFGTV 387

Query: 369 YRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLS 428
           YR E SG +HGL RVRG TQDD+H++CT+EQM +E   +   ++ + KDFG +   ++LS
Sbjct: 388 YRYEKSGEVHGLTRVRGLTQDDSHIYCTREQMKDELKNLLTFVLGLLKDFGLDDFYLELS 447

Query: 429 TR-PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAI 487
           T+ P K VGSD +W++A N +  V    K S  + ++        AFYGPK     +DAI
Sbjct: 448 TKDPHKYVGSDEIWEEATNTLAEV---AKESGLELVDDPC---GAAFYGPKISVQARDAI 501

Query: 488 GRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           GR WQ  TIQ+DFNLP RF   Y+ +      PVMIHRA+FGSIERF  +++E++ G  P
Sbjct: 502 GRTWQVSTIQLDFNLPERFKLEYIAADGTHQRPVMIHRALFGSIERFFAVLLEHYAGAFP 561

Query: 548 LWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIII 607
            WL+P+Q +   +      + Q     L+   +  E D  ++    KIR  S  K+P I+
Sbjct: 562 AWLAPVQVLGVPVADEFAPHLQRFIASLEEETVRCEIDMSDDRFGKKIRNASKSKVPFIL 621

Query: 608 ICGDKEASERSIGIR-RFGSTTTQKVSLLDAIPI 640
           I G+++ +  ++  R R GS        L+ +P+
Sbjct: 622 IVGEEDMNNNAVSFRFRDGSQ-------LNGVPV 648


>gi|78776267|ref|YP_392582.1| threonyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251]
 gi|78496807|gb|ABB43347.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Sulfurimonas
           denitrificans DSM 1251]
          Length = 602

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 231/589 (39%), Positives = 364/589 (61%), Gaps = 21/589 (3%)

Query: 38  AVAVAINGKVCDLSDPVREG--SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVA 95
           A+A+  NG++ D+      G    +I+      SL V+RHS AH+MA+A++S++P+ +  
Sbjct: 3   AIAIKHNGEIIDMQTAKECGFEGEQILLDNSEESLNVLRHSTAHLMAQAIKSLYPDAKFF 62

Query: 96  IGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKE 155
           +GP +++GFYYDF         +L  IEK+M  +  +     K  +S ++A+E F  K +
Sbjct: 63  VGPNVKEGFYYDFKTSSEIGEGDLKNIEKEMLSLAKKKYEIEKYEISMDEAKEKF--KDD 120

Query: 156 AYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRP 215
             K+ +++ IP  + V++Y+QGE+ DLCRGPH+ + G ++ +FKL K+AGAY  GDS   
Sbjct: 121 HLKLFVMQRIPG-DRVSIYKQGEFEDLCRGPHLPNIGLIR-YFKLTKIAGAYLGGDSKNE 178

Query: 216 MLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWK 274
           ML+RIYG A+  ++ L  YL  + E+EKRDHRKL  EM +F   E+ G+G   W   G +
Sbjct: 179 MLTRIYGIAFADKEALKSYLDMMAEAEKRDHRKLGAEMKMFTFREEVGAGFPIWLPAGGR 238

Query: 275 IFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           +   L S + +   K  YE +  P++L   LW+ SGH+ +Y  NM+      D I+    
Sbjct: 239 LRARLESLLFKAHRKRGYEPVRGPEMLRSDLWKTSGHYQNYGENMYFTNI--DEIE---- 292

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
           F +KPMNC GH+ ++   L SYR+LP++  E+G V+R+E +G+LHGL RVR FTQDDAH+
Sbjct: 293 FGVKPMNCVGHIKIYEEDLHSYRDLPLKYFEYGVVHRHEMTGALHGLFRVREFTQDDAHI 352

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
           FC  +Q+  + +++ + +  I   F F   M+ LST+P K VG D++W+ +   +K  +D
Sbjct: 353 FCRADQIEEQIIEVVDFVDKIMSTFEFNYKMM-LSTKPAKAVGDDSVWEVSTQALKNAMD 411

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS 513
             KN     I+ G     GAFYGPK +  + DAIGR+WQCGTIQ+DFNLPSRF   Y   
Sbjct: 412 --KNGLVYEIDEG----GGAFYGPKIDIKITDAIGREWQCGTIQLDFNLPSRFELEYNGE 465

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIAN 573
           +++K  PVMIHRA+ GS ERFIGI+ E++ G  P++++P Q  +  I  +  +YA+E+++
Sbjct: 466 NNDKIQPVMIHRAILGSFERFIGILTEHYAGEFPMFIAPTQVAIVPIAPTHNDYAKELSD 525

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
            L       E   +N+++N ++R     ++P++++ GD+E + R++ IR
Sbjct: 526 KLMDLGADSEIYSKNDSLNKRVRTAEKTRVPMLVVIGDEEVASRTVAIR 574


>gi|254778840|ref|YP_003056945.1| threonyl-tRNA synthetase [Helicobacter pylori B38]
 gi|254000751|emb|CAX28675.1| Threonyl-tRNA synthetase (Threonine--tRNA ligase) (ThrRS)
           [Helicobacter pylori B38]
          Length = 612

 Score =  454 bits (1167), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 235/583 (40%), Positives = 358/583 (61%), Gaps = 21/583 (3%)

Query: 44  NGKVCDLSDPVR--EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE 101
           + K   LSD ++  +GS  +   + P +L VIRHSCAH++A+++++++P+ +  +GP++E
Sbjct: 19  SAKALGLSDGIKALKGSEPVYFDDSPLALEVIRHSCAHLLAQSLKALYPDAKFFVGPVVE 78

Query: 102 DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEI 161
           +GFYYDF      S ++L +IE KM+E         K+ L+ E+A E F  K +  K  +
Sbjct: 79  EGFYYDFKTASKISEEDLPKIEAKMKEFAKLKLAITKEILTREQALERF--KGDELKHAV 136

Query: 162 LESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIY 221
           +  I   +   +Y+QGE+ DLC+GPH+ +T +    FKL K+AGAY  GD N  ML RIY
Sbjct: 137 MSKISG-DIFGVYQQGEFEDLCKGPHLPNT-RFLNHFKLTKLAGAYLGGDENNEMLIRIY 194

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLI 280
           G A+ T++ L  YL+ +EE++KRDHRKL  E+ LF   ++ G+G+  W  KG ++ + + 
Sbjct: 195 GIAFATKEGLKDYLFQIEEAKKRDHRKLGVELGLFSFDDEIGAGLPLWLPKGARLRKRIE 254

Query: 281 SYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPM 339
             + R +    YE +  P++L   +W+ SGH+D+Y+ NM+       T  D + + +KPM
Sbjct: 255 DLLSRALLLRGYEPVKGPEILKSDVWKISGHYDNYKENMYF------TTIDEQEYGIKPM 308

Query: 340 NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQ 399
           NC GH+ V+   L SYR+LP+R  E+G V+R+E SG LHGL+RVR FTQDDAH+FC+ EQ
Sbjct: 309 NCVGHIKVYQSTLHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDAHIFCSFEQ 368

Query: 400 MFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSS 459
           + +E   I +    I + FGF   M +LSTRP K +G D +W+ A + +K  L       
Sbjct: 369 IQSEVSAILDFTHKIMQAFGFSYEM-ELSTRPAKSIGDDEVWEKATDALKEAL------K 421

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
           + RIN  +  G GAFYGPK +  + DA+ R WQCGTIQVD NLP RF   + N ++    
Sbjct: 422 EHRINYKIDEGGGAFYGPKIDIKITDALRRKWQCGTIQVDMNLPERFKLAFTNEYNHAEQ 481

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH 579
           PVMIHRA+ GS ERFI I+ E+F GN P +++P Q  +  I      +A ++   LK H 
Sbjct: 482 PVMIHRAILGSFERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHVFALKLKEELKKHD 541

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           + +E   +N+++N K+R    +KIP+I++ G++E     + IR
Sbjct: 542 IFVEVLDKNDSLNKKVRLAEKQKIPMILVLGNEEVETEILSIR 584


>gi|319442178|ref|ZP_07991334.1| threonyl-tRNA synthetase [Corynebacterium variabile DSM 44702]
          Length = 697

 Score =  454 bits (1167), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 245/608 (40%), Positives = 354/608 (58%), Gaps = 48/608 (7%)

Query: 71  AVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEII 130
            VIRHSCAH++A+AVQ  +P  ++ IGP IE+GFYYDF+  +PF+ ++L ++EK M++II
Sbjct: 84  GVIRHSCAHVLAQAVQKEFPGTKLGIGPAIENGFYYDFEPAEPFTPEDLKKLEKSMKKII 143

Query: 131 ARDSPF-LKQYLSHEKARELFESKKEAYKVEILES-----IP--------AKENVTLY-- 174
                F  K Y S E AR   E  +E +K+E+++      IP         +  +T Y  
Sbjct: 144 KSGQKFERKAYDSVEDAR--LEYLQEPFKLELVDDKSRGDIPEGDASVEVGEGELTAYSN 201

Query: 175 ---RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQ 229
              R GE  W+DLCRGPHV +T  +  F  L + + AYWRGD ++  L RIYGTAW +++
Sbjct: 202 VNPRSGEVEWYDLCRGPHVPTTRYIPAF-ALTRTSAAYWRGDQSKAGLQRIYGTAWESKE 260

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-I 287
            L +Y   L E+EKRDHR+L  E+DLF   ++ GSG   +H  G  +   +  + RR+ I
Sbjct: 261 ALDEYQTMLAEAEKRDHRRLGSELDLFSFPDEIGSGFPVFHPDGATVRMEMEEHSRRRHI 320

Query: 288 KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV------KCADDTI-KDLRTFALKPMN 340
              Y  +NTP +    L+++SGH D Y   MF        + AD  I K    +  KPMN
Sbjct: 321 ASGYSFVNTPHITKGDLFKKSGHLDWYADGMFPAMKLDEERDADGNITKQAVDYYAKPMN 380

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
           CP H  +F    +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDDAH++CT++Q+
Sbjct: 381 CPMHNLIFASRGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYCTEDQL 440

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTR-PEKRVGSDALWDDAENIMKGVLDTIKNSS 459
             E   +   IIS+ KD+G +   ++LST+ P+K VGSD +W+ A N ++ V +      
Sbjct: 441 EVELTTVLEFIISLLKDYGLDDFYLELSTKDPKKFVGSDEVWEKATNTLRAVAE------ 494

Query: 460 QDRINTGVLL---GEGA-FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS 515
                +G+ L    EGA FYGPK     +DAIGR WQ  T+Q+DFNLP RF+  Y  S  
Sbjct: 495 ----KSGLELVPDPEGAAFYGPKISVQARDAIGRTWQMSTVQLDFNLPERFDLEYTASDG 550

Query: 516 EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLL 575
            K  PVMIHRA+FGSIERF G+++E++ G  P WL+P Q     +    + Y +E+   L
Sbjct: 551 TKQRPVMIHRALFGSIERFFGVLLEHYAGAFPAWLAPHQVTGIPVADEFIPYLEEVTAEL 610

Query: 576 KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
           + H +    D  ++ +  KIR H+  K+P +++ G ++    ++  R    T    V   
Sbjct: 611 RGHGIRAAVDTSDDRMQKKIRNHTTGKVPFMLLVGGRDVEAGAVSFRFLDGTQVNGVPKE 670

Query: 636 DAIPILTK 643
           DA+ I+ +
Sbjct: 671 DAVRIIAE 678


>gi|291299890|ref|YP_003511168.1| threonyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728]
 gi|290569110|gb|ADD42075.1| threonyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728]
          Length = 668

 Score =  454 bits (1167), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 254/659 (38%), Positives = 375/659 (56%), Gaps = 53/659 (8%)

Query: 19  VHATGSDVAESISR----SLAKKAVAVA--INGKVCDLS-DPVREGSIEIITPEDPRSLA 71
           V A G+  A++I+     +   KA+ V     G + DLS  P  E  +E +  + P  L 
Sbjct: 14  VIAAGTTCADAIAEAGLPTTGPKAIVVVRDAEGNLRDLSWAPDAEAEVEPVAIDSPDGLN 73

Query: 72  VIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIA 131
           V+RHSCAH++A+AVQ +  + ++ IGP I DGFYYDFD  +PF  D+L ++EK+MQEII 
Sbjct: 74  VLRHSCAHVLAQAVQDLHKDAKLGIGPPIRDGFYYDFDVAEPFHPDDLKKLEKRMQEIIK 133

Query: 132 RDSPF-LKQYLSHEKARELFESKKEAYKVEILE-----SIPAKE-------NVTLY---- 174
               F  +++ S + AR   E   E YK+ +++      + A E       ++T+Y    
Sbjct: 134 SGQRFSRREFASKDAARA--ELADEPYKLLLVDIKGDDEVDADEVMEVGGGDLTIYDNLD 191

Query: 175 -RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQEL 231
            + G+  W DLCRGPH+ ST  +  F KLM+ A AYW G    P L R+YGTAW ++  L
Sbjct: 192 AKSGDRVWGDLCRGPHLPSTRHIPAF-KLMRSAAAYWMGSEKNPQLQRVYGTAWPSRDAL 250

Query: 232 TQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
            ++L  LEE+ KRDHRKL  ++DLF   ++ GSG+  +H KG  I Q + SY+R++ KD 
Sbjct: 251 KEHLRMLEEAAKRDHRKLGAQLDLFSFPDELGSGLPVFHPKGGIIRQEMESYLRQRQKDA 310

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
            YE +NTP +  ++L+  SGH   Y  +MF     +        + LK MNCP H  ++ 
Sbjct: 311 GYELVNTPHITKENLFLTSGHLPYYADSMFPPMEFEGA-----EYYLKSMNCPMHNLIYR 365

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
              +SYRELP+RL+EFGSVYR E SG +HGL RVRG T DDAH++CT+EQ   E   +  
Sbjct: 366 SRGRSYRELPLRLSEFGSVYRYEKSGVVHGLTRVRGLTMDDAHIYCTEEQRDEELKSLLK 425

Query: 410 LIISIYKDFGFEKIMVKLSTR--PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGV 467
            ++ + +D+G +   ++LSTR   +K +G    W+DA   ++ V +           +G+
Sbjct: 426 FVLELLRDYGLDDFYLELSTRGDSDKFIGDPKDWEDATETLRRVAE----------ESGL 475

Query: 468 LL----GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
            L    G  AFYGPK     KDAIGR WQ  TIQ+DFN P+RF   Y  +   +  PVMI
Sbjct: 476 ELVPDPGGAAFYGPKISVQAKDAIGRTWQMSTIQIDFNQPARFELEYSAADGTRKQPVMI 535

Query: 524 HRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIE 583
           HRA+FGSIERF G++ E++ G  P WL+P+QA+   I    V Y  E    L++  +  E
Sbjct: 536 HRALFGSIERFFGVLTEHYAGAFPAWLAPVQAVGIPIRDENVPYLDEFVAKLRAEGIRAE 595

Query: 584 TDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            D  ++ +  K+R   ++KIP +++ GD +    ++  R    +    V L +A+  +T
Sbjct: 596 VDTSDDRMQKKVRNAQLQKIPFMVLAGDTDQEAGTVSFRYRDGSQRNGVPLEEAVAHVT 654


>gi|333028319|ref|ZP_08456383.1| putative threonyl-tRNA synthetase [Streptomyces sp. Tu6071]
 gi|332748171|gb|EGJ78612.1| putative threonyl-tRNA synthetase [Streptomyces sp. Tu6071]
          Length = 580

 Score =  454 bits (1167), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 243/587 (41%), Positives = 352/587 (59%), Gaps = 43/587 (7%)

Query: 81  MAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQY 140
           MA+AVQ I+PE ++ IGP ++DGFYYDFD E+PF+ ++L  +EKKMQEI  R   F ++ 
Sbjct: 1   MAQAVQEIFPEAKLGIGPPVKDGFYYDFDVEKPFTPEDLKAVEKKMQEIQKRGQRFSRRV 60

Query: 141 LSHEKARELFESKKEAYKVEIL--------ESIPAKE----NVTLY-----RQGE--WFD 181
           +S + AR   E   E YK+E++        E   A E     +T+Y     + GE  W D
Sbjct: 61  VSEDDARA--ELADEPYKLELIGLKGGSTSEDGSAVEVGGNELTIYDNLDAKTGELCWKD 118

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ +T  +  F KLM+ A AYWRG    PML RIYGTAW ++ EL  +L FL E+
Sbjct: 119 LCRGPHLPTTRLIPAF-KLMRNAAAYWRGSEKNPMLQRIYGTAWPSKDELKAHLDFLAEA 177

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQV 299
           EKRDHRKL  E+DLF   E+ G G+  +H KG  I + +  Y RR+ +++ YE + +P  
Sbjct: 178 EKRDHRKLGNELDLFSFPEEVGPGLAVFHPKGGIIRRAMEDYSRRRHEEEGYEFVYSPHT 237

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L+++SGH D Y   M+     D+ +     + LKPMNCP H  +F+   +SYRELP
Sbjct: 238 TKGALFEKSGHLDWYADGMYPPMQLDEGV----DYYLKPMNCPMHNLIFDARGRSYRELP 293

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +RL EFG+VYR E SG +HGL R RGFTQDDAH++CTKEQM  E  K    ++++ +D+G
Sbjct: 294 LRLFEFGTVYRYEKSGVVHGLTRSRGFTQDDAHIYCTKEQMAEELDKTLTFVLNLLRDYG 353

Query: 420 FEKIMVKLSTRPEKR-VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL----GEGAF 474
            +   ++LST+ EK+ VGSD +W++A   ++ V +            G+ L    G  AF
Sbjct: 354 LDDFYLELSTKDEKKFVGSDEVWEEATATLQQVAE----------KQGLPLVPDPGGAAF 403

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK     +DAIGR WQ  T+Q+DFNLP RF+  Y  +   +  PVMIHRA+FGSIERF
Sbjct: 404 YGPKISVQARDAIGRTWQMSTVQLDFNLPERFDLSYTAADGSRQRPVMIHRALFGSIERF 463

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             +++E++ G +P WL+P+QA+   +  + V Y +E A   +   L ++ D  ++ +  K
Sbjct: 464 FAVLLEHYAGAMPPWLAPVQAVGIPVGDAHVPYLKEFAAEARRKGLRVDVDASSDRMQKK 523

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           IR H  +K P ++I GD + +  ++  R    +    +   +AI  L
Sbjct: 524 IRNHQKQKTPFMVIVGDDDMNAGTVSFRHRDGSQENGIPKDEAIAKL 570


>gi|239917575|ref|YP_002957133.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Micrococcus
           luteus NCTC 2665]
 gi|281413939|ref|ZP_06245681.1| threonyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
 gi|259516574|sp|C5CBI2|SYT_MICLC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|239838782|gb|ACS30579.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Micrococcus
           luteus NCTC 2665]
          Length = 672

 Score =  454 bits (1167), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 258/679 (37%), Positives = 377/679 (55%), Gaps = 56/679 (8%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIE 60
           P +I LT  DG ++      TG D    + R     AV + ++G + DL+  +  G S+E
Sbjct: 4   PKNILLTV-DGELREVTHGTTGLD----LFREKPTTAV-MRVDGLLWDLAREIPAGASVE 57

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            +   +P  L V+RHS AH+MA+AVQ + P  ++ IGP I DGFY+DFD + PF+ ++L 
Sbjct: 58  SVDITEPEGLEVLRHSTAHVMAQAVQQLRPGAKLGIGPYITDGFYFDFDVDDPFTPEDLK 117

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN---------- 170
           QI   MQ+I+     F ++ +  E AR   E   E YK+E+L    A +           
Sbjct: 118 QISSLMQKIVKSGQAFRRRVVDEETARA--EMADEPYKLELLGKKDAADTAGEGASVEVG 175

Query: 171 ---VTLY-----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRI 220
              +T+Y     + G+  W DLCRGPH+ ST  +   F L + A AYW G+     L RI
Sbjct: 176 AGEITIYDNVDRKTGDAVWCDLCRGPHLPSTKLIGNGFALTRSAAAYWLGNEKNKQLQRI 235

Query: 221 YGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTL 279
           YGTAW ++ +L  Y   L E+E+RDHRKL  E+DLF   ++ GSG+  +H +G  I + +
Sbjct: 236 YGTAWASKDDLKAYQERLAEAERRDHRKLGAELDLFSFPDELGSGLPVFHPRGGIIRKEM 295

Query: 280 ISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT----- 333
             Y RR+  +  YE + TP +  QHL++ SGH D Y   MF     D+ ++D  T     
Sbjct: 296 EDYSRRRHTEAGYEFVYTPHITKQHLYEVSGHLDWYANGMFPPMHIDE-VRDPETGEITR 354

Query: 334 ----FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
               + LKPMNCP H  ++    +SYRELP+RL EFGSVYR E SG +HGL RVRG TQD
Sbjct: 355 QGQNYYLKPMNCPMHNLIYRSRGRSYRELPLRLFEFGSVYRYEKSGVVHGLTRVRGMTQD 414

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR-PEKRVGSDALWDDAENIM 448
           DAH++CT+EQM  E     N ++ + KD+G     ++LST+ PEK VGSD +W++A   +
Sbjct: 415 DAHIYCTREQMKEELTTTLNFVLDLLKDYGLNDFHLELSTKDPEKFVGSDEIWEEATRTL 474

Query: 449 KGVLDTIKNSSQDRINTGVLL----GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPS 504
             V +           +G+ L    G  AFYGPK     +DAIGR WQ  TIQ+DFNLP 
Sbjct: 475 AEVAEA----------SGLQLVPDPGGAAFYGPKISVQARDAIGRTWQMSTIQLDFNLPE 524

Query: 505 RFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA 564
           RF+  Y  +   +  PVMIHRA+FGSIERF+G++ E++ G  P WL+P Q +   +  + 
Sbjct: 525 RFDLEYQAADGTRQRPVMIHRALFGSIERFLGVLTEHYAGAFPAWLAPEQVVAIPVAEAF 584

Query: 565 VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRF 624
            +Y  ++   L++  +    D  ++    KIR  + +K P ++I G ++    ++  R  
Sbjct: 585 NDYLDDVVAKLRAEGIRARLDDSSDRFPKKIRTAAKEKAPFVLIAGGEDREAGAVSFRFR 644

Query: 625 GSTTTQKVSLLDAIPILTK 643
             T    V + +AI  + K
Sbjct: 645 DGTQDNGVPVEEAIERIVK 663


>gi|315586098|gb|ADU40479.1| threonine--tRNA ligase [Helicobacter pylori 35A]
 gi|317179509|dbj|BAJ57297.1| threonyl-tRNA synthetase [Helicobacter pylori F30]
          Length = 612

 Score =  454 bits (1167), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 237/591 (40%), Positives = 357/591 (60%), Gaps = 37/591 (6%)

Query: 44  NGKVCDLSDPVR--EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE 101
           + KV  LSD ++   G+  I   + P +L VIRHSCAH++A+++++++P+ +  +GP++E
Sbjct: 19  SAKVLGLSDGIKALNGTEPIYFDDSPLALEVIRHSCAHLLAQSLKALYPDAKFFVGPVVE 78

Query: 102 DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEI 161
           +GFYYDF      S ++L +IE KM+E         K+ L+ E+A E F  K +  K  +
Sbjct: 79  EGFYYDFKTASKISEEDLPKIEAKMKEFAKLKLAITKEVLTREQALERF--KGDELKHAV 136

Query: 162 LESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIY 221
           +  I   +   +Y+QGE+ DLC+GPH+ +T +    FKL K+AGAY  GD N  ML RIY
Sbjct: 137 MSKISG-DAFGVYQQGEFEDLCKGPHLPNT-RFLNHFKLTKLAGAYLGGDENNEMLIRIY 194

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLI 280
           G A+ T++ L  YL+ +EE++KRDHRKL  E+ LF   ++ G+G+  W  KG +      
Sbjct: 195 GIAFATKEGLKDYLFQIEEAKKRDHRKLGVELGLFSFDDEIGAGLPLWLPKGAR------ 248

Query: 281 SYMRRKIKD---------DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
             +R++I+D          YE +  P++L   +W+ SGH+D+Y+ NM+       T  D 
Sbjct: 249 --LRKRIEDLLSKALLLRGYEPVKGPEILKSDVWKISGHYDNYKENMYF------TTIDE 300

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
           + + +KPMNC GH+ V+   L SYR+LP+R  E+G V+R+E SG LHGL+RVR FTQDDA
Sbjct: 301 QEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDA 360

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
           H+FC+ EQ+ +E   I +    I + F F   M +LSTRP K +G D +W+ A N +K  
Sbjct: 361 HIFCSFEQIQSEVSAILDFTHKIMQAFDFSYEM-ELSTRPAKSIGDDKVWEKATNALKEA 419

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
           L       + RI+  +  G GAFYGPK +  + DA+ R WQCGTIQVD NLP RF   + 
Sbjct: 420 L------KEHRIDYKIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDMNLPERFKLAFT 473

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
           N H+    PVMIHRA+ GS ERFI I+ E+F GN P +++P Q  +  I      +A ++
Sbjct: 474 NEHNHAEQPVMIHRAILGSFERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHAFALKL 533

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
              LK   + +E   +N+++N K+R    +KIP+I++ G++E     + IR
Sbjct: 534 KEALKKRDIFVEVLDKNDSLNKKVRLAEKQKIPMILVLGNEEVETEILSIR 584


>gi|308182296|ref|YP_003926423.1| threonyl-tRNA synthetase [Helicobacter pylori PeCan4]
 gi|308064481|gb|ADO06373.1| threonyl-tRNA synthetase [Helicobacter pylori PeCan4]
          Length = 612

 Score =  453 bits (1166), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 236/591 (39%), Positives = 359/591 (60%), Gaps = 37/591 (6%)

Query: 44  NGKVCDLSDPVR--EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE 101
           + K   LSD V+   G+  I   + P +L VIRHSCAH++A+++++++P+ +  +GP++E
Sbjct: 19  SAKALGLSDGVKALNGTEPIYFDDSPLALEVIRHSCAHLLAQSLKALYPDAKFFVGPVVE 78

Query: 102 DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEI 161
           +GFYYDF      S ++L +IE KM+E         K+ L+ E+A E F  K +  K  +
Sbjct: 79  EGFYYDFKTASKISEEDLPKIEAKMKEFAKLKLAITKEVLTREQALERF--KGDELKHTV 136

Query: 162 LESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIY 221
           +  I   +   +Y+QGE+ DLC+GPH+ +T +    FKL K+AGAY  GD N  ML RIY
Sbjct: 137 MSKISG-DKFGVYQQGEFEDLCKGPHLPNT-RFLNHFKLTKLAGAYLGGDENNEMLIRIY 194

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLI 280
           G A+ T++ L  YL+ +EE++KRDHRKL  E+ LF   ++ G+G+  W  KG +      
Sbjct: 195 GIAFATKEGLKDYLFQIEEAKKRDHRKLGVELGLFSFDDEIGAGLPLWLPKGAR------ 248

Query: 281 SYMRRKIKD---------DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
             +R++I+D          YE +  P++L   +W+ SGH+D+Y+ NM+       T  D 
Sbjct: 249 --LRKRIEDLLSKALLLRGYEPVKGPEILKSDVWKISGHYDNYKENMYF------TTIDE 300

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
           + + +KPMNC GH+ V+   L SYR+LP+R  E+G V+R+E SG LHGL+RVR FTQDDA
Sbjct: 301 QEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDA 360

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
           H+FC+ EQ+ +E   I +    I + F F   M +LSTRP K +G D +W+ A N +K  
Sbjct: 361 HIFCSFEQIQSEVSAILDFTHKIMQAFDFSYEM-ELSTRPAKSIGDDKVWEKATNALKEA 419

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
           L       + RI+  +  G GAFYGPK +  + DA+ R WQCGTIQVD NLP RF   + 
Sbjct: 420 L------KEHRIDYKIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDMNLPERFKLAFT 473

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
           N ++    PVMIHRA+ GS ERFI I+ E+F GN P +++P Q  +  I      +A ++
Sbjct: 474 NEYNHAEQPVMIHRAILGSFERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHVFALKL 533

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
             +LK  ++ +E   +N+++N K+R    +KIP+I++ G++E    ++ IR
Sbjct: 534 KEVLKKRNIFVEVLDKNDSLNKKVRSAEKQKIPMILVLGNEEMETENLSIR 584


>gi|308061413|gb|ADO03301.1| threonyl-tRNA synthetase [Helicobacter pylori Cuz20]
          Length = 612

 Score =  453 bits (1166), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 238/591 (40%), Positives = 357/591 (60%), Gaps = 37/591 (6%)

Query: 44  NGKVCDLSDPVR--EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE 101
           + KV  LSD V+   G+  I   + P +L VIRHSCAH++A+++++++P+ +  +GP++E
Sbjct: 19  SAKVLGLSDGVKALNGTEPIYFDDSPLALEVIRHSCAHLLAQSLKALYPDAKFFVGPVVE 78

Query: 102 DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEI 161
           +GFYYDF      S ++L +IE KM+E         K+ L+ E+A E F  K +  K  +
Sbjct: 79  EGFYYDFKTASKISEEDLPKIEAKMKEFAKLKLTITKEVLTREQALERF--KGDELKHAV 136

Query: 162 LESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIY 221
           +  I   +   +Y+QGE+ DLC+GPH+ +T +    FKL K+AGAY  GD N  ML RIY
Sbjct: 137 MSKISG-DVFGVYQQGEFEDLCKGPHLPNT-RFLNHFKLTKLAGAYLGGDENNEMLIRIY 194

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLI 280
           G A+ T++ L  YL+ +EE++KRDHRKL  E+ LF   ++ G+G+  W  KG +      
Sbjct: 195 GIAFATKEGLKDYLFQMEEAKKRDHRKLGVELGLFSFDDEIGAGLPLWLPKGAR------ 248

Query: 281 SYMRRKIKD---------DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
             +R++I+D          YE +  P++L   +W+ SGH+D+Y+ NM+       T  D 
Sbjct: 249 --LRKRIEDLLSKALLLRGYEPVKGPEILKSDVWKISGHYDNYKENMYF------TTIDE 300

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
           + + +KPMNC GH+ V+   L SYR+LP+R  E+G V+R+E SG LHGL+RVR FTQDDA
Sbjct: 301 QEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDA 360

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
           H+FC+ EQ+ +E   I +    I + F F   M +LSTRP K +G D +W+ A N +K  
Sbjct: 361 HIFCSFEQIQSEVSAILDFTHKIMQAFDFSYEM-ELSTRPAKSIGDDKVWEKATNALKEA 419

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
           L       + RI+  +  G GAFYGPK +  + DA+ R WQCGTIQVD NLP RF   + 
Sbjct: 420 L------KEHRIDYKIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDMNLPERFKLAFT 473

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
           N H+    PVMIHRA+ GS ERFI I+ E+F GN P +++P Q  +  I      +A ++
Sbjct: 474 NEHNHAEQPVMIHRAILGSFERFIAILSEHFGGNFPFFVAPTQIALIPINEEHRAFALKL 533

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
              LK   + +E   +N+++N K+R    +KIP+I++ G++E     + IR
Sbjct: 534 KEELKKRDIFVEVLDKNDSLNKKVRLAEKQKIPMILVLGNEEVGTEILSIR 584


>gi|311113703|ref|YP_003984925.1| threonine--tRNA ligase [Rothia dentocariosa ATCC 17931]
 gi|310945197|gb|ADP41491.1| threonine--tRNA ligase [Rothia dentocariosa ATCC 17931]
          Length = 678

 Score =  453 bits (1166), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 248/639 (38%), Positives = 364/639 (56%), Gaps = 55/639 (8%)

Query: 37  KAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVA 95
           K V   +NG + DLS  + EG ++E +  ++P  L V+RHS AH+MA+AVQ    + ++ 
Sbjct: 35  KIVVARVNGTLVDLSHKLSEGDTVEPVFIDEPDGLNVLRHSAAHVMAQAVQEYRKDAKLG 94

Query: 96  IGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKE 155
           IGP I DGFY+DFD  +PF+ ++L +IEK M +II     F ++ ++H++A E  E K E
Sbjct: 95  IGPYITDGFYFDFDVAEPFTPEDLKKIEKSMIKIIKSGQLFRRRVVTHDEAVE--EMKNE 152

Query: 156 AYKVEILE-----------------SIPAKENVTLY-----RQGE--WFDLCRGPHVRST 191
            YK+E+L                   + A E +T+Y     + GE  W DLCRGPH+ +T
Sbjct: 153 PYKLELLSLSQGPGSGADAAEGASVEVGAGE-ITIYDNVHPKTGEVLWNDLCRGPHLPNT 211

Query: 192 GQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAR 251
             +   + LM+  GAYWRG    PML RIYGTAW T+ EL +Y + + E+E+RDHR+L +
Sbjct: 212 KLIANGYALMRAGGAYWRGSEKNPMLQRIYGTAWPTKDELVEYKHRIAEAERRDHRRLGK 271

Query: 252 EMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSG 309
           E+DLF   ++ G G+   H KG  I + +  Y+R R I + ++ ++TP +  + L+  SG
Sbjct: 272 ELDLFSFPKNIGPGLPVIHPKGGVIKREMEDYVRARHIAEGFQYVSTPHISKEDLFYTSG 331

Query: 310 HWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVY 369
           H   Y   MF     D+       + LK MNCP H  ++    +SYRELP+R  EFG+VY
Sbjct: 332 HLPYYADGMFPAMVLDNG-----NYRLKAMNCPMHNEIYRSRGRSYRELPLRFFEFGTVY 386

Query: 370 RNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
           R+E SG L GL RVR  TQDD+H + TKEQ  +E   + N ++S+ +DFG     ++LST
Sbjct: 387 RDEKSGVLQGLTRVRMITQDDSHSYVTKEQAPDEVRHLLNFMLSLLEDFGMTDFYLELST 446

Query: 430 R------PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL----GEGAFYGPKF 479
           R       +K +G+D  W+ A  +++ V             TG+ L    G  AFYGPK 
Sbjct: 447 RDTEGDKKDKFIGTDEQWEQATAVLEQVAQ----------ETGLELVPDPGGAAFYGPKI 496

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
               KDAIGR WQ  T+Q DFN PSRF   Y  +      PVMIH A FGSIERF+G++ 
Sbjct: 497 SVQAKDAIGRTWQMSTVQYDFNQPSRFGLEYQAADGSIQEPVMIHSAKFGSIERFLGVLT 556

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E++ G  P WLSP+Q I   +  +  +Y  EIA+ L+   + +E D+ ++    KIR  S
Sbjct: 557 EHYAGAFPAWLSPVQVICVPVAEAFNDYMTEIADKLREQGVRVEVDYGSDRFTKKIRTAS 616

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
            +K+P I+I G ++A   ++  R  G+     V + +A+
Sbjct: 617 TEKVPFILIAGGEDAEAGAVSFRFRGNKQENGVPVDEAV 655


>gi|156552955|ref|XP_001603180.1| PREDICTED: similar to threonyl-tRNA synthetase [Nasonia
           vitripennis]
          Length = 859

 Score =  453 bits (1166), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 247/644 (38%), Positives = 372/644 (57%), Gaps = 27/644 (4%)

Query: 3   SDIKLTFPDGSIKNFPVHA---TGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGS 58
           ++I +T PDG  K  P  +   T  +VA+ IS+ LA   V   +N ++ DL  P+ ++  
Sbjct: 217 TEITVTLPDG--KEVPAQSWRTTPYEVAKGISQGLADNTVIAKVNNELWDLDRPLEKDCK 274

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF--DKEQPFSS 116
           ++++  +DP + AV  HS AHI+ EA++ ++    +  GP IE+GFYYD    +++  S 
Sbjct: 275 LQLLKFDDPEAQAVFWHSSAHILGEALERVYGGC-LCYGPPIENGFYYDMFMGQDKGISQ 333

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
           ++   +E   + I+     F +  +  E   E+F  K   +KV IL+        T+YR 
Sbjct: 334 EDFPYLESLFKNIVKDKQSFERLEMKKEDLLEMF--KYNEFKVRILKEKVQTPTTTVYRC 391

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           G   DLCRGPHVR+TG++K   K+ K + AYW G++N   L R+YG ++   ++L ++  
Sbjct: 392 GPLIDLCRGPHVRNTGKIKAA-KITKSSSAYWEGNANAETLQRVYGISFPDSKQLKEWEK 450

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
           F EE+ KRDHRK+ +E +LF   E   G  F+  +G  I+ TL+ ++R + K   ++E+ 
Sbjct: 451 FQEEAAKRDHRKIGKEQELFFFHELSPGSCFFQPRGAHIYNTLVEFIRGEYKKRGFQEVV 510

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP + +  LWQ SGHW  Y  NMF+     +T      FALKPMNCPGH  +F+   +S+
Sbjct: 511 TPNIYNSKLWQTSGHWQHYSENMFSFDVEKET------FALKPMNCPGHCMIFDVRNRSW 564

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP+R+A+FG ++RNE SG+L GL RVR F QDDAH+FCT EQ+ +E L   + +  +Y
Sbjct: 565 RELPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCTSEQIKDEMLGALDFLDHVY 624

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
             FGF    + LSTRPEK +G  A+WD AE  +   LD         +N G    +GAFY
Sbjct: 625 SVFGF-TFNLCLSTRPEKFLGEVAVWDAAEKALSESLDAFGKPWT--LNPG----DGAFY 677

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  + DA+ R  QC TIQ+DF LP RFN  YVN   EK  PV+IHRA+ GS+ER I
Sbjct: 678 GPKIDITIMDALKRAHQCATIQLDFQLPIRFNLNYVNETGEKTRPVIIHRAILGSVERMI 737

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF-RNETINYK 594
            I+ E++ G  P WLSP Q +V  +  S  EYA +  + + +     E D    +T+N K
Sbjct: 738 AILTESYAGKWPFWLSPRQVMVIPVGPSLDEYATQTRDKIHAAGFMTEVDTDHGDTLNKK 797

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           IR   + +   I++ G+KE +  ++ +R   +    ++ + D I
Sbjct: 798 IRNAQLDQFNFILVVGEKEKAAGTVNVRTRDNKVHGEIGVDDLI 841


>gi|317506992|ref|ZP_07964761.1| threonyl-tRNA synthetase [Segniliparus rugosus ATCC BAA-974]
 gi|316254750|gb|EFV14051.1| threonyl-tRNA synthetase [Segniliparus rugosus ATCC BAA-974]
          Length = 683

 Score =  453 bits (1166), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 239/611 (39%), Positives = 361/611 (59%), Gaps = 45/611 (7%)

Query: 44  NGKVCDLS-DPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIED 102
           +G + DL+  P  +  +E +        +VIRHS AH++A+AVQ  +PE ++ IGP I+D
Sbjct: 46  DGALRDLAWSPEADALVEPVLANTEEGRSVIRHSAAHVLAQAVQQEFPEAKLGIGPPIKD 105

Query: 103 GFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL 162
           GFYYDF  ++ F+ ++LA++E +M++II     F ++ +  E+AR   E   E +K+E++
Sbjct: 106 GFYYDFRVDRAFTPEDLARLETRMRKIIKASQRFARRVVEVEEARA--ELAGEPFKLELI 163

Query: 163 ESIPAKEN----------VTLY-----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAG 205
                 ++          +T+Y     R GE  W DLCRGPH+ +T  +  F KL + + 
Sbjct: 164 SDKSGIDDPEVMEVGGAELTIYDNLNPRTGEREWADLCRGPHIPTTKHIPAF-KLTRSSA 222

Query: 206 AYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSG 264
           AYWRGD +R  L RIYGTAW + + L ++L  + E+E+RDHRKL  E+DLF   ++ GSG
Sbjct: 223 AYWRGDQSRDSLQRIYGTAWESAEALERHLELIAEAERRDHRKLGTELDLFSFPDELGSG 282

Query: 265 VIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKC 323
           +  +H KG  + + L  Y R K I+  YE +NTP +   HL++ SGH D Y   MF    
Sbjct: 283 LPVFHPKGGILRKELEDYSRAKHIEAGYEFVNTPHITKSHLYEVSGHLDWYADGMFPPMH 342

Query: 324 ADDTI-------KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            D  +       K  + + LKPMNCP H  +F    +SYRELP+RL EFGSVYR E SG 
Sbjct: 343 VDAELDADGAVRKPGQDYYLKPMNCPMHNLIFRSRGRSYRELPLRLFEFGSVYRYEKSGV 402

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR-V 435
           +HGL RVRG TQDDAH++CT++QM +E  K    ++ + +D+G +   ++LST+ E++ V
Sbjct: 403 IHGLTRVRGMTQDDAHIYCTRDQMKDELAKTLQFVLDLLRDYGLDDFYLELSTKDEEKFV 462

Query: 436 GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL----GEGAFYGPKFEYILKDAIGRDW 491
           GSD +W++A   +  V +           +G+ L    G  AFYGPK     KDA+GR W
Sbjct: 463 GSDEIWEEATRTLAEVAEA----------SGLTLVPDPGGAAFYGPKISVQAKDALGRTW 512

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLS 551
           Q  TIQ+DFNLP RF   Y      +  PVMIHRA+FGSIERFIG+++E++ G  P WLS
Sbjct: 513 QMSTIQLDFNLPERFGLEYTGPSGHREQPVMIHRALFGSIERFIGVLVEHYAGAFPAWLS 572

Query: 552 PIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
           P+QA+   ++   V + +   + L++  +    D  ++ +  KI  H+ +KIP +++ G 
Sbjct: 573 PVQAMGIPVSDDHVPHLRAFVDSLRAGGVRAHLDTSDDRMQKKIFTHTAQKIPFLVLAGA 632

Query: 612 KEASERSIGIR 622
           ++    ++  R
Sbjct: 633 RDVEAGTVSFR 643


>gi|18311304|ref|NP_563238.1| threonyl-tRNA synthetase [Clostridium perfringens str. 13]
 gi|110801319|ref|YP_697012.1| threonyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
 gi|168205151|ref|ZP_02631156.1| threonyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
 gi|168210374|ref|ZP_02635999.1| threonyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626]
 gi|168213233|ref|ZP_02638858.1| threonyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
 gi|168216713|ref|ZP_02642338.1| threonyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
 gi|182625789|ref|ZP_02953556.1| threonyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
 gi|22654117|sp|Q8XI02|SYT_CLOPE RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|123148532|sp|Q0TMX8|SYT_CLOP1 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|18145987|dbj|BAB82028.1| threonine-tRNA ligase [Clostridium perfringens str. 13]
 gi|110675966|gb|ABG84953.1| threonyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
 gi|170663286|gb|EDT15969.1| threonyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
 gi|170711530|gb|EDT23712.1| threonyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626]
 gi|170715283|gb|EDT27465.1| threonyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
 gi|177908945|gb|EDT71432.1| threonyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
 gi|182381219|gb|EDT78698.1| threonyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
          Length = 643

 Score =  453 bits (1166), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 245/631 (38%), Positives = 375/631 (59%), Gaps = 30/631 (4%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+T  DGSIK      +  ++A+SIS+ LA+ A    +NGKV DL   V E  S+EI T
Sbjct: 2   IKITLKDGSIKEVEAGLSIFEIAQSISQGLARNACCGILNGKVEDLRFIVNEDSSLEICT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +         H+ +H++A AV+ ++P+ ++AIGP I++GFYYDFD E+PFS+D+L ++E
Sbjct: 62  FDSKEGQHAFNHTASHVLAAAVKRLFPQDKLAIGPSIDNGFYYDFDTEKPFSADQLNKLE 121

Query: 124 KKMQEIIARDSPFLKQY-LSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           ++M++II +++P +K++ L   +A EL   K E YKVE++  +P  E ++ Y+ G++ DL
Sbjct: 122 EEMKKII-KENPEIKRFELPRNEALELM--KDEPYKVELINDLPEGEVISFYQIGDFVDL 178

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPH+ +   +K   KL++  GAYW+GD    MLSR+YGTA+  + EL  YL  LEE++
Sbjct: 179 CAGPHLMAVKPIKAV-KLLRSTGAYWKGDEKNKMLSRVYGTAFPKKSELDAYLEALEEAK 237

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKDD-----YEEINT 296
           KRDH KL RE+ +F   E+ G G+     KG +I QTL    +R I+D+     Y    T
Sbjct: 238 KRDHNKLGRELGIFTTDENVGQGLPLLMPKGARIIQTL----QRWIEDEEQRRGYVLTKT 293

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +    L++ SGHWD Y+  MF +    D  KD   FAL+PM CP   A++N    SYR
Sbjct: 294 PLMAKSDLYKISGHWDHYKDGMFVL---GDEEKDSEVFALRPMTCPFQYAIYNSTQHSYR 350

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +LPVR AE  +++RNE SG +HGL+RVR FT  D H+ CT EQ+ +E     +L+  + +
Sbjct: 351 DLPVRFAETSTLFRNESSGEMHGLIRVRQFTLADGHIVCTPEQLEDEFKNTVDLVKYVME 410

Query: 417 DFGF-EKIMVKLS----TRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
             G  + I  + S       EK +     W++ +NIM+ +L+ +       I+      E
Sbjct: 411 TLGIADDITYRFSKWDPNNTEKYINDPEAWENTQNIMREILNHLN------IDFTEADDE 464

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
            AFYGPK +   K+  G++    TIQ+DF L  RF  +Y++   EK  P +IHR+  G  
Sbjct: 465 AAFYGPKLDIQFKNVHGKEDTIITIQIDFALAERFGMYYIDKDGEKKRPYIIHRSSIGCY 524

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           ER + ++IE + G LP W++P+QA V  ++    +YA E+   L+   + +E D R E I
Sbjct: 525 ERTLAMLIEKYAGALPTWIAPVQAKVLPLSDKYADYANEVVEELRRRGVRVEADHRAEKI 584

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIR 622
            YKIRE  +++ P I++ G+KEA  + + +R
Sbjct: 585 GYKIREARLERTPYILVVGEKEAENKEVSVR 615


>gi|212715814|ref|ZP_03323942.1| hypothetical protein BIFCAT_00715 [Bifidobacterium catenulatum DSM
           16992]
 gi|212661181|gb|EEB21756.1| hypothetical protein BIFCAT_00715 [Bifidobacterium catenulatum DSM
           16992]
          Length = 677

 Score =  453 bits (1165), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 248/619 (40%), Positives = 355/619 (57%), Gaps = 36/619 (5%)

Query: 36  KKAVAVAINGKVCDLSDPVREGSI-EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           K  +AV +NG+  DL   + +G + E I  +    LA++RHS  H+MA+AVQ I P+ ++
Sbjct: 31  KNIIAVRLNGEPRDLYTELHDGDVVEPIVLDSEDGLAIMRHSATHVMAQAVQEIRPDAKL 90

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKAR------- 147
            +GP+I+DGFYYDFD E PF+ D+L +IEK+MQ II     F ++ ++ E+A        
Sbjct: 91  GVGPVIKDGFYYDFDVETPFTPDDLKEIEKRMQRIIKSSQSFRRRVVTEEEALAEEADQP 150

Query: 148 ---ELFESKKEAYKVEILESIPAKENVTLY----RQGE--WFDLCRGPHVRSTGQVKKFF 198
              EL + K+     E    I  KE ++ Y    R G   W DLCRGPH+ +T  +K F 
Sbjct: 151 YKLELIKDKEAHLDPEAATEISGKE-LSFYDNVDRDGNVVWKDLCRGPHLPNTRYIKAF- 208

Query: 199 KLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI 258
           K+ + A AYWRG    PML R+YG A+ T+++L  Y   LEE+ KRDHRKL  EMDLF  
Sbjct: 209 KIERSAAAYWRGSEANPMLQRVYGAAFATKEDLKAYQTRLEEAAKRDHRKLGAEMDLFSF 268

Query: 259 AED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
            ++ G G+  +H KG  +   +  Y R    K  Y  + TP +    L++ SGH   Y+ 
Sbjct: 269 PDEIGPGLAVFHPKGAAVINAMEDYSREMHRKHHYSFVQTPHITKGGLYETSGHLHWYKD 328

Query: 317 NMFAVKCAD-------DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVY 369
            M+     D       + IK    + LKPMNCP H  +F    +SYRELP+RL EFG+VY
Sbjct: 329 GMYPAMRLDEEKDENGNVIKQGFDYYLKPMNCPMHNLIFKSRQRSYRELPLRLFEFGTVY 388

Query: 370 RNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
           R E SG +HGL RVRG TQDD+H++CT+EQM +E   +   ++ + KDFG +   ++LST
Sbjct: 389 RYEKSGEVHGLTRVRGLTQDDSHIYCTREQMKDELKNLLTFVLGLLKDFGLDDFYLELST 448

Query: 430 R-PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIG 488
           + P K VGSD +W++A N +  V    K S  + I+        AFYGPK     +DAIG
Sbjct: 449 KDPHKYVGSDEIWEEATNTLAEV---AKESGLELIDDPC---GAAFYGPKISVQARDAIG 502

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPL 548
           R WQ  TIQ+DFNLP RF   Y+ +      PVMIHRA+FGSIERF  +++E++ G  P 
Sbjct: 503 RTWQVSTIQLDFNLPERFGLEYIAADGTHQRPVMIHRALFGSIERFFAVLLEHYAGAFPA 562

Query: 549 WLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIII 608
           WL+P+Q +   +      + Q+    L+   +  E D  ++    KIR  S  K+P I+I
Sbjct: 563 WLAPVQVLGVPVADEFAPHLQQFIASLEEETVRCEIDMSDDRFGKKIRNASKSKVPFILI 622

Query: 609 CGDKEASERSIGIR-RFGS 626
            G+++ +  ++  R R GS
Sbjct: 623 VGEEDMNNNAVSFRFRDGS 641


>gi|171910788|ref|ZP_02926258.1| threonyl-tRNA synthetase [Verrucomicrobium spinosum DSM 4136]
          Length = 652

 Score =  453 bits (1165), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 243/615 (39%), Positives = 353/615 (57%), Gaps = 69/615 (11%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           L  +RHSCAHIMA A+  IWP+ Q A GP +E GFYYDFD +   + D+  +IE +M++I
Sbjct: 17  LERLRHSCAHIMATAILRIWPDAQFAYGPPVESGFYYDFDLKHRITPDDFEKIEAEMKKI 76

Query: 130 IARDSPFLKQYLSHEKARELFESKK-----------EAYKVEILESIPAKENVTLYRQGE 178
              +  F K+ LS E+A  L ES +             +K++++  IP  E ++ Y+ GE
Sbjct: 77  AKENQKFEKRVLSREEAIALAESGRLGGLSERPGNASQFKLDLIAKIPEGEEISCYQNGE 136

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + DLC GPHV  T + K   KLM +A AY+ GD ++P L R+YGTA+ + +EL ++L  L
Sbjct: 137 FLDLCAGPHVNYTSKCKNV-KLMSIASAYYMGDESKPQLQRLYGTAFPSSEELAKHLEQL 195

Query: 239 EESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINT 296
           EE++KRDHRKL RE+ LF I E  G G+I W  KG  I Q L +++  ++ K  Y+++ T
Sbjct: 196 EEAKKRDHRKLGRELQLFAIDEKVGQGLILWLPKGAVIRQELQNFIGEELRKQGYQQVFT 255

Query: 297 PQVLDQHLWQQSGHWDSYRANMFA--------VKCAD----------------------- 325
           P +    L++ SGH+  Y+ + F+         K AD                       
Sbjct: 256 PHIGKLELYKTSGHFPYYKESQFSPVVENDELAKAADCGCSCAEVMARLEGVSKKLREEI 315

Query: 326 ------DTIKDLRT---------FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYR 370
                 DTI   R          F LKPMNCP H+ ++    KSYR+LPVRLAEFG+VYR
Sbjct: 316 NSRTGQDTITADRVMPEEDLMDGFLLKPMNCPHHIRIYAQSPKSYRDLPVRLAEFGTVYR 375

Query: 371 NEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR 430
            E SG L GL RVRGFTQDDAH+FCT++Q+  E +   +L+ ++    G     V++  R
Sbjct: 376 WEQSGELGGLTRVRGFTQDDAHLFCTEDQVEQEIMGCLSLVKTVLTTLGMSDYRVRVGLR 435

Query: 431 ---PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAI 487
                K  G+   WD AE   +    T+     +        GE AFYGPK ++++KD I
Sbjct: 436 DPDSNKYTGTAESWDKAEASCRKAASTLGVPFTEEP------GEAAFYGPKIDFVVKDVI 489

Query: 488 GRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           GR+WQ GT+QVD+N P RF+  Y+ + +    PVMIHRA FGS+ERF G++IE+F G+ P
Sbjct: 490 GREWQLGTVQVDYNNPVRFDLTYIGADNAAHRPVMIHRAPFGSMERFTGVLIEHFAGHFP 549

Query: 548 LWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIII 607
           +WL+P Q  V T++  +  +A E+ N LK+  + +  D  ++ I  KIR   I KIP ++
Sbjct: 550 VWLAPEQVRVLTVSEKSDAFANEVLNELKAKGVRVVLDQSSDKIGAKIRNAQIDKIPYML 609

Query: 608 ICGDKEASERSIGIR 622
           + G+KEA+  ++ +R
Sbjct: 610 VIGEKEANSGAVAVR 624


>gi|229817631|ref|ZP_04447913.1| hypothetical protein BIFANG_02901 [Bifidobacterium angulatum DSM
           20098]
 gi|229785420|gb|EEP21534.1| hypothetical protein BIFANG_02901 [Bifidobacterium angulatum DSM
           20098]
          Length = 677

 Score =  453 bits (1165), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 247/634 (38%), Positives = 365/634 (57%), Gaps = 45/634 (7%)

Query: 36  KKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           K  +AV +NG+  DL  P+ +G ++E I  +    +A++RHS  H+MA+AVQ I+P  ++
Sbjct: 31  KNIIAVRLNGEPRDLYTPLSDGDTVEGIALDSEDGIAIMRHSATHVMAQAVQEIYPNAKL 90

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            +GP+I+DGFYYDFD EQPF+ ++L  IEK+MQ II     F ++ ++ E+A    E   
Sbjct: 91  GVGPVIKDGFYYDFDVEQPFTPEDLKNIEKRMQRIIKSSQSFRRRVVTEEEALA--EEAD 148

Query: 155 EAYKVEILESIPA-----------KENVTLY----RQGE--WFDLCRGPHVRSTGQVKKF 197
           + YK+E+++   A           ++ ++ Y    R G   W DLCRGPH+ +T  +K F
Sbjct: 149 QPYKIELIKDKEAHLDPAAATEVSEKELSFYDNVDRDGNVVWKDLCRGPHLPNTRYIKAF 208

Query: 198 FKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFH 257
            K+ + A AYWRG    PML RIYG A+ T+++L  Y   LEE+ KRDHRKL  EMDLF 
Sbjct: 209 -KIERSAAAYWRGSEANPMLQRIYGAAFATKEDLKAYQTRLEEAAKRDHRKLGAEMDLFS 267

Query: 258 IAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYR 315
             ++ G G+  +H KG  +   +  Y R    K  Y  + TP +    L++ SGH   Y+
Sbjct: 268 FPDEIGPGLAVFHPKGAAVINAMEDYSREMHRKHHYSFVQTPHITKGGLYETSGHLHWYK 327

Query: 316 ANMFAVKCAD-------DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV 368
            +M+     D       +  K    + LKPMNCP H  +F    +SYRELP+RL EFG+V
Sbjct: 328 DSMYPPMRLDEEKDENGNVTKQGFDYYLKPMNCPMHNLIFKSRQRSYRELPLRLFEFGTV 387

Query: 369 YRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLS 428
           YR E SG +HGL RVRG TQDD+H++CT+EQM +E   +   ++ + KDFG +   ++LS
Sbjct: 388 YRYEKSGEVHGLTRVRGLTQDDSHIYCTREQMKDELKNLLTFVLGLLKDFGLDDFYLELS 447

Query: 429 TR-PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAI 487
           T+ P K VGSD +W++A N +  V    K+S  + ++        AFYGPK     +DAI
Sbjct: 448 TKDPHKYVGSDEIWEEATNTLAEV---AKDSGLELVDDPC---GAAFYGPKISVQARDAI 501

Query: 488 GRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           GR WQ  TIQ+DFNLP RF   Y+ +      PVMIHRA+FGSIERF  +++E++ G  P
Sbjct: 502 GRTWQVSTIQLDFNLPERFQLEYIAADGTHQRPVMIHRALFGSIERFFAVLLEHYAGAFP 561

Query: 548 LWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIII 607
            WL+P+Q +   +      + Q+    L+   +  E D  ++    KIR  S  K P I+
Sbjct: 562 AWLAPVQVLGVPVADEFAPHLQKFIASLEEETVRCEIDLSDDRFGKKIRNASKSKAPFIL 621

Query: 608 ICGDKEASERSIGIR-RFGSTTTQKVSLLDAIPI 640
           I G+++ +  ++  R R GS        L+ +P+
Sbjct: 622 IVGEEDMNNNAVSFRFRDGSQ-------LNGVPV 648


>gi|307103531|gb|EFN51790.1| hypothetical protein CHLNCDRAFT_56367 [Chlorella variabilis]
          Length = 594

 Score =  453 bits (1165), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 241/609 (39%), Positives = 346/609 (56%), Gaps = 62/609 (10%)

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T E+   L  IRHSCAHIMA AVQ +    QV IGP  + GF+YDFD  QP +  +L +I
Sbjct: 15  TSEESEDLLRIRHSCAHIMAMAVQRLHKGAQVTIGPWTDRGFFYDFDMPQPLTERDLPKI 74

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN---VTLYRQG-- 177
            K+MQ I+ ++ PF+++           ++  E YK+EIL+SI  ++    +T+Y  G  
Sbjct: 75  RKEMQRILKKNLPFVRE-----------DAAGEPYKLEILDSILERDPQAPITIYHIGTP 123

Query: 178 ----EWFDLCRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELT 232
                W+DLC GPHV +TG +      L  VAGAYWRGD  RPML RIYGTAW T+++L 
Sbjct: 124 GSEDHWWDLCAGPHVAATGDILPDALDLESVAGAYWRGDETRPMLQRIYGTAWQTKEQLI 183

Query: 233 QYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDD 290
            Y  F EE+  RDHR+L +E+DLF I E  G G++FWH KG  +   +  + +   ++  
Sbjct: 184 AYHRFNEEAALRDHRRLGQELDLFSINEACGGGLVFWHPKGAMVRHLVEDFWKSIHLQYG 243

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH 350
           Y  + TP +    LW+ SGH+D YR +MF                LKPMNCP H+ ++  
Sbjct: 244 YHLLFTPHIAKVDLWKTSGHFDFYRDSMF------------NQMDLKPMNCPFHITIYKQ 291

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
           G  SYR+LP++ AE G+VYR E SG++HGL R      DDAH+FC   Q+  E L + +L
Sbjct: 292 GYYSYRDLPIKWAELGTVYRYERSGTMHGLFR------DDAHIFCLPTQIEAEILGVLDL 345

Query: 411 IISIYKDFGFEK--------------IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIK 456
              +   FGF                + V LSTRP+K VGS  +WD AE+ +K  L    
Sbjct: 346 TELLLSQFGFHDFEASCKRKPPPRPCLQVNLSTRPDKFVGSPEIWDQAEHALKAALQRKG 405

Query: 457 NSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE 516
            +  + +      G GAFYGPK +  + DAIGR WQC T+Q+DFNLP RF+ FY++  + 
Sbjct: 406 WAFAEDV------GGGAFYGPKIDIKICDAIGRKWQCSTVQLDFNLPERFDMFYISDANI 459

Query: 517 KCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLK 576
           K  P+MIHRA+ GS+ERF+GI+IEN+ G  PLWL+P+Q  +  +  + + Y   +A  L+
Sbjct: 460 KERPIMIHRAILGSLERFMGILIENYAGAFPLWLAPVQCRLVPVNDAVMGYVSGVAQALQ 519

Query: 577 SHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
           +  L +E      ++   IR     KIP++ + G +EAS  ++ +R +       + + D
Sbjct: 520 AAGLRVEVS-SGLSVGKAIRAAEKDKIPVMCVVGQREASAGTVAVRTYSHGDVGCMLVED 578

Query: 637 AIPILTKES 645
            +  + K S
Sbjct: 579 LVERMAKAS 587


>gi|187932904|ref|YP_001884583.1| threonyl-tRNA synthetase [Clostridium botulinum B str. Eklund 17B]
 gi|238691610|sp|B2TIT5|SYT_CLOBB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|187721057|gb|ACD22278.1| threonine--tRNA ligase [Clostridium botulinum B str. Eklund 17B]
          Length = 643

 Score =  453 bits (1165), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 247/630 (39%), Positives = 365/630 (57%), Gaps = 28/630 (4%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           IK+T  DGS+K F    +  ++A+SIS  LA+ A    +NGKVCDL + V+E  S+ I T
Sbjct: 2   IKVTLKDGSVKEFEAGLSVYEIAKSISEGLARNACCGVVNGKVCDLREEVKEDVSLSICT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +       +RHS +H++A AV+ ++PE ++AIGP I  GFYYDFDK+  FS+ +L ++E
Sbjct: 62  FDSQEGKDAVRHSISHVLAYAVKRLFPETKLAIGPSIATGFYYDFDKDVAFSAQDLEKLE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M++II  +    K  L   +A EL   K E YKVE++  +   E ++ Y+ GE+ DLC
Sbjct: 122 AEMKKIIKENPSIEKFELPRNEALELM--KDEPYKVELINDLGEDEIISFYKLGEFTDLC 179

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPHV S   +K   KL++ AGAYW+GD    ML+RIYGTA+  + EL +YL  +EE++K
Sbjct: 180 AGPHVMSLKPIKAI-KLIRSAGAYWKGDEKNKMLTRIYGTAFLKKSELDEYLDAVEEAKK 238

Query: 244 RDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKDDYEE-----INTP 297
           RDH KL RE+ LF   E+ G G+     KG KI QTL    +R ++D+ E        TP
Sbjct: 239 RDHNKLGRELKLFTTDENVGQGLPLLMPKGAKIVQTL----QRWVEDEEERRGYVLTKTP 294

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    L++ SGHWD Y+  MF +    D  KD   FAL+PM CP    ++N    SYR+
Sbjct: 295 LMAKSDLYKISGHWDHYKDGMFVL---GDEEKDEEVFALRPMTCPFQYTIYNAEQHSYRD 351

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R  E  +++RNE SG +HGL+RVR FT  D H+  T EQ+  E   +  LI  + K 
Sbjct: 352 LPIRYGETSTLFRNESSGEMHGLIRVRQFTLADGHLIVTPEQLEEEFKGVLELIQYLMKT 411

Query: 418 FGF-EKIMVKLS----TRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
            G  E I  + S       EK +     W+  ++ M+ +LD +K      IN      E 
Sbjct: 412 LGIDEDISYRFSKWDPNNTEKYINDPEAWNKTQDTMRTILDHLK------INYVEADDEA 465

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           AFYGPK +   ++  G++    T+Q+DF L  RF+  Y++ + EK  P +IHR+  G  E
Sbjct: 466 AFYGPKLDLQCRNVHGKEDTLFTVQIDFALAERFDMSYIDKNGEKKRPYIIHRSSIGCYE 525

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
           R + ++IE + G  P WLSP+Q  V  I+    +YA+ +   L++  + IE D+R E I 
Sbjct: 526 RTLAMLIEKYAGAFPTWLSPVQVKVLPISDKYNDYAESVVKSLRNKGVRIEADYRAEKIG 585

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIR 622
           YKIRE  +++ P I++ G+KEA+   + +R
Sbjct: 586 YKIREARLERTPYILVVGEKEAANNEVSVR 615


>gi|238063845|ref|ZP_04608554.1| threonyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
 gi|237885656|gb|EEP74484.1| threonyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
          Length = 676

 Score =  453 bits (1165), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 255/649 (39%), Positives = 368/649 (56%), Gaps = 59/649 (9%)

Query: 33  SLAKKAVAVAIN--GKVCDLS-DPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIW 89
           S   KAV V  +  G + DL   P  + ++E +  + P  L V+RHS AH++A+AVQ ++
Sbjct: 32  SSGPKAVVVVRDPQGNLRDLDWVPAEDTTVEPVALDTPDGLNVLRHSTAHVLAQAVQDVF 91

Query: 90  PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSH------ 143
           PE ++ IGP IE+GFYYDF  ++PF  D+LA++EK+MQEI+     F ++  +       
Sbjct: 92  PEAKLGIGPPIENGFYYDFAVDKPFQPDDLAKLEKRMQEIVKSGQRFRRRRFASLDEAKA 151

Query: 144 EKARELF---------ESKKEAYKVEILESIPAKE----NVTLYRQGE-------WFDLC 183
           E A E F         + ++ A K E L+S    E     +T+Y   +       W DLC
Sbjct: 152 ELAAEPFKLELVDLKGDQEQGAVKGEGLDSSEVMEVGGGELTIYDNLDAKEEKVCWSDLC 211

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ +T ++   FKLM+ A AYWRG    P L R+YGTAW T+ EL  YL  LEE+ +
Sbjct: 212 RGPHLPNT-RLIGAFKLMRSAAAYWRGSEKNPQLQRVYGTAWPTRDELKAYLKLLEEAAR 270

Query: 244 RDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           RDHRKL  ++DLF   ++ GSG+  +H KG  I + + +Y R K ++  Y  +NTP +  
Sbjct: 271 RDHRKLGVDLDLFSFPDELGSGLAVFHPKGGIIRREMENYSRIKHEEAGYAFVNTPHITK 330

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
            HL++ SGH D Y   MF     +        + LKPMNCP H  +F    +SYRELP+R
Sbjct: 331 GHLYEVSGHLDWYADGMFPPMEVEGA-----NYYLKPMNCPMHDLIFRSRGRSYRELPLR 385

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           + EFG+VYR E SG +HGL RVRG TQDDAH+FCT+EQM  E   +   ++ + +D+G +
Sbjct: 386 MFEFGTVYRYEKSGVVHGLTRVRGMTQDDAHIFCTEEQMAGELKSLLAFVLELLRDYGLD 445

Query: 422 KIMVKLSTR-PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL----GEGAFYG 476
              ++LSTR PEK VG+D  W+ A   ++   +           +G+ L       AFYG
Sbjct: 446 DFYLELSTRNPEKSVGTDENWERATEALRTAAE----------ESGLHLVPDPAGAAFYG 495

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK     KDAIGR WQ  TIQVDFNLP RF   Y  +   +  PVMIHRA+FGSIERF G
Sbjct: 496 PKISVQAKDAIGRTWQMSTIQVDFNLPERFGLEYQAADGTRQRPVMIHRALFGSIERFFG 555

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           ++ E++ G  P WL+P+Q +   I     +Y +     L++  +  + D  ++ +  KIR
Sbjct: 556 VLTEHYAGAFPAWLAPVQVVGIPIREDHTDYLRGFVAALRAEGIRAQVDAGDDRMQKKIR 615

Query: 597 EHSIKKIPIIIICGDKEASERSIGIR------RFGSTTTQKVS-LLDAI 638
               +KIP ++I GD + +  ++  R      R G  T + V+ +LD +
Sbjct: 616 TAQQQKIPFMVIAGDDDVAAGTVSFRYRDGSQRNGVPTAEAVAHVLDVV 664


>gi|253567818|ref|ZP_04845229.1| threonyl-tRNA synthetase [Bacteroides sp. 1_1_6]
 gi|251841891|gb|EES69971.1| threonyl-tRNA synthetase [Bacteroides sp. 1_1_6]
          Length = 556

 Score =  453 bits (1165), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 233/565 (41%), Positives = 348/565 (61%), Gaps = 19/565 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIEIITP 64
           IK+TFPDGS++ +     G  +AESIS  LA+  +A  +NG+  DL  P+ E +  ++  
Sbjct: 2   IKITFPDGSVREYNEGVNGLQIAESISSRLAQDVLACGVNGETYDLGRPINEDADFVLYK 61

Query: 65  -EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
            +D        H+ AH++AEA+Q ++P +Q  IGP IE+GFYYD D  E      +L  I
Sbjct: 62  WDDEEGKHAFWHTSAHLLAEALQELYPGIQFGIGPAIENGFYYDVDPGEAVIKESDLPAI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E KM E+ A+    +++ +S   A ++F  + E YK E++  +    ++T Y QG + DL
Sbjct: 122 EAKMLELSAKKEAVVRESISKTDALKMFGDRGETYKCELISEL-EDGHITTYTQGAFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ +T  +K   KL  VAGAYWRG  +R ML+RIYG  +  ++ L +YL  LEE++
Sbjct: 181 CRGPHLMTTAPIKAI-KLTTVAGAYWRGHEDRKMLTRIYGITFPKKKMLDEYLVLLEEAK 239

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           KRDHRK+ +EM LF  +E  G G+  W  KG  +   L  ++RR + + DY+E+ TP + 
Sbjct: 240 KRDHRKIGKEMQLFMFSETVGKGLPMWLPKGTALRLRLQEFLRRIQTRYDYQEVITPPIG 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ L+  SGH+  Y  + F       T ++   + LKPMNCP H  ++ +  +SY++LP+
Sbjct: 300 NKLLYVTSGHYAKYGKDAFQ---PIHTPEEGEEYFLKPMNCPHHCEIYKNFPRSYKDLPL 356

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AEFG+V R E SG LHGL RVR FTQDDAH+FC  +Q+ +E L++ ++I  +++   F
Sbjct: 357 RIAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKDEFLRVMDIISIVFRSMNF 416

Query: 421 EKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           +    ++S R     EK +GSD  W+ AE  +      I+   +  +   +  GE AFYG
Sbjct: 417 QNFEAQISLRDKVNREKYIGSDDNWEKAEQAI------IEACEEKGLPAKIEYGEAAFYG 470

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK ++++KDAIGR WQ GTIQVD+NLP RF   Y+ S ++K  PVMIHRA FGS+ERF+ 
Sbjct: 471 PKLDFMVKDAIGRRWQLGTIQVDYNLPERFELEYMGSDNQKHRPVMIHRAPFGSMERFVA 530

Query: 537 IMIENFKGNLPLWLSPIQAIVTTIT 561
           ++IE+  G  PLWL+P Q  +  I+
Sbjct: 531 VLIEHTAGKFPLWLTPDQVAILPIS 555


>gi|308062983|gb|ADO04870.1| threonyl-tRNA synthetase [Helicobacter pylori Sat464]
          Length = 612

 Score =  452 bits (1164), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 237/591 (40%), Positives = 358/591 (60%), Gaps = 37/591 (6%)

Query: 44  NGKVCDLSDPVR--EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE 101
           + KV  LSD V+  +G+  I   + P +L VIRHSCAH++A+++++++P+ +  +GP++E
Sbjct: 19  SAKVLGLSDGVKALDGTEPIYFDDSPLALEVIRHSCAHLLAQSLKALYPDAKFFVGPVVE 78

Query: 102 DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEI 161
           +GFYYDF      S ++L +IE KM+E         K+ L+ E+A E F  K +  K  +
Sbjct: 79  EGFYYDFKTASKISEEDLPKIEAKMKEFAKLKLAITKEVLTREQALERF--KGDELKHAV 136

Query: 162 LESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIY 221
           +  I   +   +Y+QGE+ DLC+GPH+ +T +    FKL K+AGAY  GD N  ML RIY
Sbjct: 137 MSKISG-DAFGVYQQGEFEDLCKGPHLPNT-RFLNHFKLTKLAGAYLGGDENNEMLIRIY 194

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLI 280
           G A+ T++ L  YL+ +EE++KRDHRKL  E+ LF   ++ G+G+  W  KG +      
Sbjct: 195 GIAFATKEGLKDYLFQIEEAKKRDHRKLGVELGLFSFDDEIGAGLPLWLPKGAR------ 248

Query: 281 SYMRRKIKD---------DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
             +R++I+D          YE +  P++L   +W+ SGH+D+Y+ NM+       T  D 
Sbjct: 249 --LRKRIEDLLSKALLLRGYEPVKGPEILKSDVWKISGHYDNYKENMYF------TTIDE 300

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
           + + +KPMNC GH+ V+   L SYR+LP+R  E+G V+R+E SG LHGL+RVR FTQDDA
Sbjct: 301 QEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDA 360

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
           H+FC+ EQ+ +E   I +    I + F F   M +LSTRP K +G D +W+ A N +K  
Sbjct: 361 HIFCSFEQIQSEVSAILDFTHKIMQAFDFSYEM-ELSTRPAKSIGDDKVWEKATNALKEA 419

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
           L       + RI+  +  G GAFYGPK +  + DA+ R WQCGTIQVD NLP RF   + 
Sbjct: 420 L------KEHRIDYKIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDMNLPERFKLAFT 473

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
           N ++    PVMIHRA+ GS ERFI I+ E+F GN P +++P Q  +  I      +A ++
Sbjct: 474 NEYNHAEQPVMIHRAILGSFERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHVFALKL 533

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
              LK   + +E   +N+++N K+R    +KIP+I++ G++E     + IR
Sbjct: 534 KEALKKRDIFVEVLDKNDSLNKKVRSAEKQKIPMILVLGNEEVETEILSIR 584


>gi|169347105|ref|ZP_02866047.1| threonyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
 gi|169296788|gb|EDS78917.1| threonyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
          Length = 643

 Score =  452 bits (1163), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 244/631 (38%), Positives = 375/631 (59%), Gaps = 30/631 (4%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+T  DGSIK      +  ++A+SIS+ LA+ A    +NGKV DL   V E  S+EI T
Sbjct: 2   IKITLKDGSIKEVEAGLSIFEIAQSISQGLARNACCGILNGKVEDLRFIVNEDSSLEICT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +         H+ +H++A AV+ ++P+ ++AIGP I++GFYYDFD E+PFS+D+L ++E
Sbjct: 62  FDSKEGQHAFNHTASHVLAAAVKRLFPQDKLAIGPSIDNGFYYDFDTEKPFSADQLNKLE 121

Query: 124 KKMQEIIARDSPFLKQY-LSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           ++M++II +++P +K++ L   +A EL   + E YKVE++  +P  E ++ Y+ G++ DL
Sbjct: 122 EEMKKII-KENPEIKRFELPRNEALELM--RDEPYKVELINDLPEGEVISFYQIGDFVDL 178

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPH+ +   +K   KL++  GAYW+GD    MLSR+YGTA+  + EL  YL  LEE++
Sbjct: 179 CAGPHLMAVKPIKAV-KLLRSTGAYWKGDEKNKMLSRVYGTAFPKKSELDAYLEALEEAK 237

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKDD-----YEEINT 296
           KRDH KL RE+ +F   E+ G G+     KG +I QTL    +R I+D+     Y    T
Sbjct: 238 KRDHNKLGRELGIFTTDENVGQGLPLLMPKGARIIQTL----QRWIEDEEQRRGYVLTKT 293

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +    L++ SGHWD Y+  MF +    D  KD   FAL+PM CP   A++N    SYR
Sbjct: 294 PLMAKSDLYKISGHWDHYKDGMFVL---GDEEKDSEVFALRPMTCPFQYAIYNSTQHSYR 350

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +LPVR AE  +++RNE SG +HGL+RVR FT  D H+ CT EQ+ +E     +L+  + +
Sbjct: 351 DLPVRFAETSTLFRNESSGEMHGLIRVRQFTLADGHIVCTPEQLEDEFKNTVDLVKYVME 410

Query: 417 DFGF-EKIMVKLS----TRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
             G  + I  + S       EK +     W++ +NIM+ +L+ +       I+      E
Sbjct: 411 TLGIADDITYRFSKWDPNNTEKYINDPEAWENTQNIMREILNHLN------IDFTEADDE 464

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
            AFYGPK +   K+  G++    TIQ+DF L  RF  +Y++   EK  P +IHR+  G  
Sbjct: 465 AAFYGPKLDIQFKNVHGKEDTIITIQIDFALAERFGMYYIDKDGEKKRPYIIHRSSIGCY 524

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           ER + ++IE + G LP W++P+QA V  ++    +YA E+   L+   + +E D R E I
Sbjct: 525 ERTLAMLIEKYAGALPTWIAPVQAKVLPLSDKYADYANEVVEELRRRGVRVEADHRAEKI 584

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIR 622
            YKIRE  +++ P I++ G+KEA  + + +R
Sbjct: 585 GYKIREARLERTPYILVVGEKEAENKEVSVR 615


>gi|19552881|ref|NP_600883.1| threonyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|21324440|dbj|BAB99064.1| Threonyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
          Length = 686

 Score =  452 bits (1163), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 240/632 (37%), Positives = 359/632 (56%), Gaps = 46/632 (7%)

Query: 45  GKVCDLSD-PVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG 103
           G++ DLS  P    +   +        AVIRHSCAH++A+AVQ+ +P  ++ IGP IE+G
Sbjct: 47  GQLKDLSHVPETTATFTAVPANTDDGRAVIRHSCAHVLAQAVQAEFPGTKLGIGPAIENG 106

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE 163
           FYYDFD  +PF+ ++L  IEK+M++II     F ++ +         E K E YK+E+++
Sbjct: 107 FYYDFDAAEPFTPEDLKTIEKRMKKIIKTGQKFERR-VYESAEAAAEELKNEPYKLELIQ 165

Query: 164 SI----PAKENVTLYRQGE---------------WFDLCRGPHVRSTGQVKKFFKLMKVA 204
                 P  +  T    GE               W DLCRGPH+ +T  +  F  L + +
Sbjct: 166 DKGNVDPNSDEATEVGAGELTAYDNVNPRTSEVEWSDLCRGPHIPTTRYIPAF-ALTRSS 224

Query: 205 GAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GS 263
            AYWRGD +   L RIYGTAW  ++ L  Y   L E+EKRDHR+L  E+DLF   +D GS
Sbjct: 225 AAYWRGDQDNAGLQRIYGTAWEDKESLDAYQTMLAEAEKRDHRRLGTELDLFSFPDDLGS 284

Query: 264 GVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK 322
           G+  +H  G  +   +  + RR+ I   Y  +NTP +  Q L+++SGH   Y+  MF   
Sbjct: 285 GLPVFHPNGGIVRNEMEDHSRRRHIAAGYSFVNTPHITKQDLFERSGHLGFYKDGMFPPM 344

Query: 323 CAD-------DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
             D       +  K  + + LKPMNCP H  +F+   +SYRELP+RL EFG+VYR E SG
Sbjct: 345 QVDAEFDEDGNVTKPGQEYYLKPMNCPMHNLIFDSRGRSYRELPLRLFEFGNVYRYEKSG 404

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR-PEKR 434
            +HGL R RGFTQDDAH++CT++Q+  E   + + I+S+ +D+G +   ++LSTR P+K 
Sbjct: 405 VIHGLTRARGFTQDDAHIYCTEDQLEAELTSVLDFILSLLRDYGLDDFYLELSTRDPKKS 464

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL---GEGA-FYGPKFEYILKDAIGRD 490
           VGSD +W+ +  I+  V            N+G+ L    EGA FYGPK     +DAIGR 
Sbjct: 465 VGSDEIWERSTEILNRVA----------TNSGLELVPDPEGAAFYGPKISVQARDAIGRT 514

Query: 491 WQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL 550
           WQ  T+Q+DFN+P RFN  Y +S   K  P+MIHRA+FGSIERF G+++E++ G  P WL
Sbjct: 515 WQMSTVQLDFNMPERFNLEYTSSDGSKQQPIMIHRALFGSIERFFGVLLEHYAGAFPAWL 574

Query: 551 SPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           +P Q +   +    + + + I   L+   +  + D  ++ +  KIR H+  K+P +++ G
Sbjct: 575 APHQVMGIPVADDCIPHLETITAQLREKGIRADVDTSDDRMQKKIRNHTTGKVPFMLLAG 634

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            ++    ++  R    T    V + +AI +++
Sbjct: 635 ARDVEANAVSFRFLDGTQVNGVPVDEAIAVIS 666


>gi|163840754|ref|YP_001625159.1| threonyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
 gi|162954230|gb|ABY23745.1| threonyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
          Length = 700

 Score =  452 bits (1163), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 241/625 (38%), Positives = 359/625 (57%), Gaps = 38/625 (6%)

Query: 44  NGKVCDLSDPV-REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIED 102
           NG++ DL  P+     ++ +T +    L V+RHS AH+MA+AVQ +  + ++ IGP I D
Sbjct: 59  NGELKDLDQPLPANAQVDAVTIDSADGLDVLRHSAAHVMAQAVQQLSQDAKLGIGPYITD 118

Query: 103 GFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL 162
           GFY+DFD ++PF+ ++L Q+EK M +I+  +  F ++ +S  +A E    K E YK+E++
Sbjct: 119 GFYFDFDVDEPFTPEDLKQLEKMMLKIVNANQRFQRRVVSETEAIEAM--KDEPYKLELI 176

Query: 163 E----SIPAKEN---------VTLYRQGE------WFDLCRGPHVRSTGQVKKFFKLMKV 203
                S  A E          +T+Y   +      W DLCRGPH+ +T  +   + L + 
Sbjct: 177 GLKGGSAEAAEGASQEVGAGELTIYANLDRDENVVWQDLCRGPHLPNTKLISNAYALTRS 236

Query: 204 AGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-G 262
           + AYWRGD     L RIYGTAW T+  L  Y   + E+E+RDHRKL  E+DLF   ++ G
Sbjct: 237 SAAYWRGDQANKQLQRIYGTAWPTKDALKAYQERIAEAERRDHRKLGTELDLFSFPDELG 296

Query: 263 SGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG+  +H KG  I + +  Y R R I   YE + TP +   +L++ SGH D YR  MF  
Sbjct: 297 SGLPVFHPKGGIIRKEMEDYSRARHIAAGYEFVYTPHITKANLYEVSGHLDWYRDGMFPP 356

Query: 322 KCADDTIKDLRT-------FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
              D+ + +  T       + LKPMNCP H  +F    +SYRELP+RL EFGSVYR E S
Sbjct: 357 MHVDEELNEDGTVRKPGQDYYLKPMNCPMHNLIFRSRGRSYRELPLRLFEFGSVYRYEKS 416

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR-PEK 433
           G +HGL RVRG TQDDAH++CT++QM +E     N ++ + KD+G E   ++LST+ PEK
Sbjct: 417 GVIHGLTRVRGMTQDDAHIYCTRDQMKDELTSTLNFVLGLLKDYGLEDFYLELSTKDPEK 476

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
            VGSD +W++A   +  V      +++  ++     G  AFYGPK     +DAIGR WQ 
Sbjct: 477 YVGSDDVWEEATRTLAEV------AAESGLDLVPDPGGAAFYGPKISVQARDAIGRTWQM 530

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI 553
            TIQ+DFNLP RF   Y  +   +  PVMIHRA+FGS+ERF+ ++ E++ G  P WL+P+
Sbjct: 531 STIQLDFNLPERFELEYQAADGSRQRPVMIHRALFGSVERFMAVLTEHYAGAFPAWLAPV 590

Query: 554 QAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
           Q +   +  +  +Y  ++   L+S  +  E D  ++    KIR  S +KIP ++I G  +
Sbjct: 591 QVVGIPVAETFNDYMADVVGQLRSAGVLAELDISSDRFPKKIRTASKEKIPFVLIAGGDD 650

Query: 614 ASERSIGIRRFGSTTTQKVSLLDAI 638
               ++  R    +    V + +A+
Sbjct: 651 VEAGAVSFRFRDGSQDNGVPVAEAV 675


>gi|15611183|ref|NP_222834.1| threonyl-tRNA synthetase [Helicobacter pylori J99]
 gi|8928389|sp|Q9ZMV3|SYT_HELPJ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|4154621|gb|AAD05692.1| THREONYL-TRNA SYNTHETASE [Helicobacter pylori J99]
          Length = 612

 Score =  452 bits (1163), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 237/591 (40%), Positives = 359/591 (60%), Gaps = 37/591 (6%)

Query: 44  NGKVCDLSDPVR--EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE 101
           + KV  LSD ++  +G+  I   + P +L VIRHSCAH++A+++++++P+ +  +GP++E
Sbjct: 19  SAKVLGLSDGIKALKGTEPIYFDDSPLALEVIRHSCAHLLAQSLKALYPDAKFFVGPVVE 78

Query: 102 DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEI 161
           +GFYYDF      S ++L +IE KM+E         K+ L+ E+A E F  K +  K  +
Sbjct: 79  EGFYYDFKTTSKISEEDLPKIEAKMKEFAKSKLAITKETLTREQALERF--KGDELKHAV 136

Query: 162 LESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIY 221
           +  I   +   +Y+QGE+ DLC+GPH+ +T +    FKL K+AGAY  GD N  ML RIY
Sbjct: 137 MSKISG-DIFGVYQQGEFEDLCKGPHLPNT-RFLNHFKLTKLAGAYLGGDENNEMLIRIY 194

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLI 280
           G A+ T++ L  YL+ +EE++KRDHRKL  E+ LF   ++ G+G+  W  KG +      
Sbjct: 195 GIAFATKEGLKDYLFQIEEAKKRDHRKLGVELGLFSFDDEIGAGLPLWLPKGAR------ 248

Query: 281 SYMRRKIKD---------DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
             +R++I+D          YE +  P++L   +W+ SGH+D+Y+ NM+       T  D 
Sbjct: 249 --LRKRIEDLLSQALLLRGYEPVKGPEILKSDVWKISGHYDNYKENMYF------TTIDE 300

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
           + + +KPMNC GH+ V+   L SYR+LP+R  E+G V+R+E SG LHGL+RVR FTQDDA
Sbjct: 301 QEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDA 360

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
           H+FC+ EQ+ +E   I +    I + FGF   M +LSTRP K +G D +W+ A N +K  
Sbjct: 361 HIFCSFEQIQSEVSAILDFTHKIMQAFGFSYEM-ELSTRPAKSIGDDKVWEKATNALKEA 419

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
           L       + RI+  +  G GAFYGPK +  + DA+ R WQCGTIQVD NLP RF   + 
Sbjct: 420 L------KEHRIDYKIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDMNLPERFKLAFT 473

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
           N ++    PVMIHRA+ GS ERFI I+ E+F GN P +++P Q  +  I      +A ++
Sbjct: 474 NEYNHAEQPVMIHRAILGSFERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHVFALKL 533

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
              LK   + +E   +N+++N K+R    +KIP+I++ G++E     + IR
Sbjct: 534 KEALKKCDIFVEVLDKNDSLNKKVRLAEKQKIPMILVLGNEEVETEILSIR 584


>gi|188526926|ref|YP_001909613.1| threonyl-tRNA synthetase [Helicobacter pylori Shi470]
 gi|238691884|sp|B2URV1|SYT_HELPS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|188143166|gb|ACD47583.1| threonyl-tRNA synthetase [Helicobacter pylori Shi470]
          Length = 612

 Score =  452 bits (1163), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 237/591 (40%), Positives = 357/591 (60%), Gaps = 37/591 (6%)

Query: 44  NGKVCDLSDPVR--EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE 101
           + KV  LSD V+   G+  I   + P +L VIRHSCAH++A+++++++P+ +  +GP++E
Sbjct: 19  SAKVLGLSDGVKALNGTEPIYFDDSPLALEVIRHSCAHLLAQSLKALYPDAKFFVGPVVE 78

Query: 102 DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEI 161
           +GFYYDF      S ++L +IE KM+E         K+ L+ E+A E F  K +  K  +
Sbjct: 79  EGFYYDFKTASKISEEDLPKIEAKMKEFAKLKLAITKEVLTREQALERF--KGDELKHAV 136

Query: 162 LESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIY 221
           +  I   +   +Y+QGE+ DLC+GPH+ +T +    FKL K+AGAY  GD N  ML RIY
Sbjct: 137 MSKISG-DKFGVYQQGEFEDLCKGPHLPNT-RFLNHFKLTKLAGAYLGGDENNEMLIRIY 194

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLI 280
           G A+ T++ L  YL+ +EE++KR+HRKL  E+ LF   ++ G+G+  W  KG +      
Sbjct: 195 GIAFATKEGLKDYLFQIEEAKKRNHRKLGVELGLFSFDDEIGAGLPLWLPKGAR------ 248

Query: 281 SYMRRKIKD---------DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
             +R++I+D          YE +  P++L   +W+ SGH+D+Y+ NM+       T  D 
Sbjct: 249 --LRKRIEDLLSKALLLRGYEPVKGPEILKSDVWKISGHYDNYKENMYF------TTIDE 300

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
           + + +KPMNC GH+ V+   L SYR+LP+R  E+G V+R+E SG LHGL+RVR FTQDDA
Sbjct: 301 QEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDA 360

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
           H+FC+ EQ+ +E   I +    I + F F   M +LSTRP K +G D +W+ A N +K  
Sbjct: 361 HIFCSFEQIQSEVSAILDFTHKIMQAFDFSYEM-ELSTRPAKSIGDDKVWEKATNALKEA 419

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
           L       + RI+  +  G GAFYGPK +  + DA+ R WQCGTIQVD NLP RF   + 
Sbjct: 420 L------KEHRIDYKIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDMNLPERFKLAFT 473

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
           N H+    PVMIHRA+ GS ERFI I+ E+F GN P +++P Q  +  I      +A ++
Sbjct: 474 NEHNHAEQPVMIHRAILGSFERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHVFALKL 533

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
              LK   + +E   +N+++N K+R    +KIP+I++ G++E     + IR
Sbjct: 534 KEALKKRDIFVEVLDKNDSLNKKVRLAEKQKIPMILVLGNEEVETEILSIR 584


>gi|73919785|sp|Q8NPZ0|SYT_CORGL RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
          Length = 695

 Score =  452 bits (1163), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 240/632 (37%), Positives = 359/632 (56%), Gaps = 46/632 (7%)

Query: 45  GKVCDLSD-PVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG 103
           G++ DLS  P    +   +        AVIRHSCAH++A+AVQ+ +P  ++ IGP IE+G
Sbjct: 56  GQLKDLSHVPETTATFTAVPANTDDGRAVIRHSCAHVLAQAVQAEFPGTKLGIGPAIENG 115

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE 163
           FYYDFD  +PF+ ++L  IEK+M++II     F ++ +         E K E YK+E+++
Sbjct: 116 FYYDFDAAEPFTPEDLKTIEKRMKKIIKTGQKFERR-VYESAEAAAEELKNEPYKLELIQ 174

Query: 164 SI----PAKENVTLYRQGE---------------WFDLCRGPHVRSTGQVKKFFKLMKVA 204
                 P  +  T    GE               W DLCRGPH+ +T  +  F  L + +
Sbjct: 175 DKGNVDPNSDEATEVGAGELTAYDNVNPRTSEVEWSDLCRGPHIPTTRYIPAF-ALTRSS 233

Query: 205 GAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GS 263
            AYWRGD +   L RIYGTAW  ++ L  Y   L E+EKRDHR+L  E+DLF   +D GS
Sbjct: 234 AAYWRGDQDNAGLQRIYGTAWEDKESLDAYQTMLAEAEKRDHRRLGTELDLFSFPDDLGS 293

Query: 264 GVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK 322
           G+  +H  G  +   +  + RR+ I   Y  +NTP +  Q L+++SGH   Y+  MF   
Sbjct: 294 GLPVFHPNGGIVRNEMEDHSRRRHIAAGYSFVNTPHITKQDLFERSGHLGFYKDGMFPPM 353

Query: 323 CAD-------DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
             D       +  K  + + LKPMNCP H  +F+   +SYRELP+RL EFG+VYR E SG
Sbjct: 354 QVDAEFDEDGNVTKPGQEYYLKPMNCPMHNLIFDSRGRSYRELPLRLFEFGNVYRYEKSG 413

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR-PEKR 434
            +HGL R RGFTQDDAH++CT++Q+  E   + + I+S+ +D+G +   ++LSTR P+K 
Sbjct: 414 VIHGLTRARGFTQDDAHIYCTEDQLEAELTSVLDFILSLLRDYGLDDFYLELSTRDPKKS 473

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL---GEGA-FYGPKFEYILKDAIGRD 490
           VGSD +W+ +  I+  V            N+G+ L    EGA FYGPK     +DAIGR 
Sbjct: 474 VGSDEIWERSTEILNRVA----------TNSGLELVPDPEGAAFYGPKISVQARDAIGRT 523

Query: 491 WQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL 550
           WQ  T+Q+DFN+P RFN  Y +S   K  P+MIHRA+FGSIERF G+++E++ G  P WL
Sbjct: 524 WQMSTVQLDFNMPERFNLEYTSSDGSKQQPIMIHRALFGSIERFFGVLLEHYAGAFPAWL 583

Query: 551 SPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           +P Q +   +    + + + I   L+   +  + D  ++ +  KIR H+  K+P +++ G
Sbjct: 584 APHQVMGIPVADDCIPHLETITAQLREKGIRADVDTSDDRMQKKIRNHTTGKVPFMLLAG 643

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            ++    ++  R    T    V + +AI +++
Sbjct: 644 ARDVEANAVSFRFLDGTQVNGVPVDEAIAVIS 675


>gi|62390552|ref|YP_225954.1| threonyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|41325890|emb|CAF20053.1| THREONYL-TRNA SYNTHETASE [Corynebacterium glutamicum ATCC 13032]
          Length = 700

 Score =  452 bits (1163), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 240/632 (37%), Positives = 359/632 (56%), Gaps = 46/632 (7%)

Query: 45  GKVCDLSD-PVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG 103
           G++ DLS  P    +   +        AVIRHSCAH++A+AVQ+ +P  ++ IGP IE+G
Sbjct: 61  GQLKDLSHVPETTATFTAVPANTDDGRAVIRHSCAHVLAQAVQAEFPGTKLGIGPAIENG 120

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE 163
           FYYDFD  +PF+ ++L  IEK+M++II     F ++ +         E K E YK+E+++
Sbjct: 121 FYYDFDAAEPFTPEDLKTIEKRMKKIIKTGQKFERR-VYESAEAAAEELKNEPYKLELIQ 179

Query: 164 SI----PAKENVTLYRQGE---------------WFDLCRGPHVRSTGQVKKFFKLMKVA 204
                 P  +  T    GE               W DLCRGPH+ +T  +  F  L + +
Sbjct: 180 DKGNVDPNSDEATEVGAGELTAYDNVNPRTSEVEWSDLCRGPHIPTTRYIPAF-ALTRSS 238

Query: 205 GAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GS 263
            AYWRGD +   L RIYGTAW  ++ L  Y   L E+EKRDHR+L  E+DLF   +D GS
Sbjct: 239 AAYWRGDQDNAGLQRIYGTAWEDKESLDAYQTMLAEAEKRDHRRLGTELDLFSFPDDLGS 298

Query: 264 GVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK 322
           G+  +H  G  +   +  + RR+ I   Y  +NTP +  Q L+++SGH   Y+  MF   
Sbjct: 299 GLPVFHPNGGIVRNEMEDHSRRRHIAAGYSFVNTPHITKQDLFERSGHLGFYKDGMFPPM 358

Query: 323 CAD-------DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
             D       +  K  + + LKPMNCP H  +F+   +SYRELP+RL EFG+VYR E SG
Sbjct: 359 QVDAEFDEDGNVTKPGQEYYLKPMNCPMHNLIFDSRGRSYRELPLRLFEFGNVYRYEKSG 418

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR-PEKR 434
            +HGL R RGFTQDDAH++CT++Q+  E   + + I+S+ +D+G +   ++LSTR P+K 
Sbjct: 419 VIHGLTRARGFTQDDAHIYCTEDQLEAELTSVLDFILSLLRDYGLDDFYLELSTRDPKKS 478

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL---GEGA-FYGPKFEYILKDAIGRD 490
           VGSD +W+ +  I+  V            N+G+ L    EGA FYGPK     +DAIGR 
Sbjct: 479 VGSDEIWERSTEILNRVA----------TNSGLELVPDPEGAAFYGPKISVQARDAIGRT 528

Query: 491 WQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL 550
           WQ  T+Q+DFN+P RFN  Y +S   K  P+MIHRA+FGSIERF G+++E++ G  P WL
Sbjct: 529 WQMSTVQLDFNMPERFNLEYTSSDGSKQQPIMIHRALFGSIERFFGVLLEHYAGAFPAWL 588

Query: 551 SPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           +P Q +   +    + + + I   L+   +  + D  ++ +  KIR H+  K+P +++ G
Sbjct: 589 APHQVMGIPVADDCIPHLETITAQLREKGIRADVDTSDDRMQKKIRNHTTGKVPFMLLAG 648

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            ++    ++  R    T    V + +AI +++
Sbjct: 649 ARDVEANAVSFRFLDGTQVNGVPVDEAIAVIS 680


>gi|199599516|ref|ZP_03212905.1| Threonyl-tRNA synthetase [Lactobacillus rhamnosus HN001]
 gi|258508749|ref|YP_003171500.1| threonyl-tRNA synthetase [Lactobacillus rhamnosus GG]
 gi|199589585|gb|EDY97702.1| Threonyl-tRNA synthetase [Lactobacillus rhamnosus HN001]
 gi|257148676|emb|CAR87649.1| Threonyl-tRNA synthetase [Lactobacillus rhamnosus GG]
 gi|259650055|dbj|BAI42217.1| threonyl-tRNA synthetase [Lactobacillus rhamnosus GG]
          Length = 657

 Score =  452 bits (1162), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 239/636 (37%), Positives = 378/636 (59%), Gaps = 24/636 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           + +TFPDGS+K FP   T   + E IS SLAKKAVA  ++ ++   ++P+   G ++I+T
Sbjct: 3   LDITFPDGSVKQFPDGTTVKAITEGISNSLAKKAVAGKLDDELIAYNEPIAHSGKLQIMT 62

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
            +D   L V+R + A ++A A+++++P++    G  IEDGFYYD D+ +   S D+L  +
Sbjct: 63  KDDAEGLTVLRQTAAFVLAAALKALYPDIHFGKGQAIEDGFYYDTDRADGQVSVDDLPTV 122

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           +KKM+EII  ++      LS  +A + F  K + +K +++E+  A + +  Y+ G++ D 
Sbjct: 123 QKKMEEIIKANAALEPVVLSRAEAFDRF--KDDPFKKQLVEA--AGDPIKGYKLGDFVDF 178

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
                + S   +K F KL+ VAGAYW+G S+ PML RIYGTA+ +++ L       +E+ 
Sbjct: 179 EEKVLLPSLKDLKHF-KLLSVAGAYWQGKSSNPMLQRIYGTAYWSEKGLEDDAKRRKEAA 237

Query: 243 KRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVL 300
           +RDHR + R++DLF +  + G+G+ +W   G  I + +  Y+  ++I D YE + TP + 
Sbjct: 238 ERDHRVIGRDLDLFFVDPKVGAGLPYWMPNGATIRRVIERYIIDKEIADGYEHVYTPVLA 297

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  L++ SGHWD YR +MF        + D     L+PMNCP H+ ++NH ++SYRELP+
Sbjct: 298 NLDLYKTSGHWDHYREDMFPPM----DMGDGEMLELRPMNCPSHIQIYNHHIRSYRELPL 353

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G ++R E SG+L GL RVR  T +D H F   +Q+  E  KI  LI+ +Y+DF  
Sbjct: 354 RIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQVQEEFKKILRLIMDVYEDFNI 413

Query: 421 EKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
                +LS R     EK    D +W  +++++KG +D +       ++     GE AFYG
Sbjct: 414 TDYSFRLSYRDPKNTEKYFDDDEMWTRSQSMLKGAMDDL------HLDYYEAEGEAAFYG 467

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK +   K A+G D    TIQ+DF LP RFN  YV    E+  PVMIHR + G++ERFI 
Sbjct: 468 PKLDIQTKTALGNDETMSTIQLDFMLPERFNLTYVGKDGEEHRPVMIHRGIVGTMERFIA 527

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            + E +KG  P WL+P QA++  + +   ++Y   I   +++  L ++ D RNE + YKI
Sbjct: 528 YLTEIYKGAFPTWLAPTQAVLIPVNNDLHLDYVNRIKRQMQAAGLRVKVDDRNEKMGYKI 587

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
           RE   KKIP  ++ GDKE ++ ++ +RR+G   T++
Sbjct: 588 REAQTKKIPYTVVVGDKELNDAAVSVRRYGDEHTEE 623


>gi|297379344|gb|ADI34231.1| threonyl-tRNA synthetase [Helicobacter pylori v225d]
          Length = 612

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 236/591 (39%), Positives = 357/591 (60%), Gaps = 37/591 (6%)

Query: 44  NGKVCDLSDPVR--EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE 101
           + KV  LSD ++   G+  I   + P +L VIRHSCAH++A+++++++P+ +  +GP++E
Sbjct: 19  SAKVLGLSDGIKALNGTEPIYFDDSPLALEVIRHSCAHLLAQSLKALYPDAKFFVGPVVE 78

Query: 102 DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEI 161
           +GFYYDF      S ++L +IE KM+E         K+ L+ E+A E F  K +  K  +
Sbjct: 79  EGFYYDFKTASKISEEDLPKIEAKMKEFAKLKLAITKEVLTREQALERF--KGDELKHAV 136

Query: 162 LESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIY 221
           +  I   +   +Y+QGE+ DLC+GPH+ +T +    FKL K+AGAY  GD N  ML RIY
Sbjct: 137 MSKISG-DKFGVYQQGEFEDLCKGPHLPNT-RFLNHFKLTKLAGAYLGGDENNEMLIRIY 194

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLI 280
           G A+ T++ L  YL+ +EE++KRDHRKL  E+ LF   ++ G+G+  W  KG +      
Sbjct: 195 GIAFATKEGLKDYLFQIEEAKKRDHRKLGVELGLFSFDDEIGAGLPLWLPKGAR------ 248

Query: 281 SYMRRKIKD---------DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
             +R++I+D          YE +  P++L   +W+ SGH+D+Y+ NM+       T  D 
Sbjct: 249 --LRKRIEDLLSKALLLRGYEPVKGPEILKSDVWKISGHYDNYKENMYF------TTIDE 300

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
           + + +KPMNC GH+ V+   L SYR+LP+R  E+G V+R+E SG LHGL+RVR FTQDDA
Sbjct: 301 QEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDA 360

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
           H+FC+ EQ+ +E   I +    I + F F   M +LSTRP K +G D +W+ A N +K  
Sbjct: 361 HIFCSFEQIQSEVSAILDFTHKIMQAFDFSYEM-ELSTRPAKSIGDDKVWEKATNALKEA 419

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
           L       + RI+  +  G GAFYGPK +  + DA+ R WQCGTIQVD NLP RF   + 
Sbjct: 420 L------KEHRIDYKIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDMNLPERFKLAFT 473

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
           N ++    PVMIHRA+ GS ERFI I+ E+F GN P +++P Q  +  I      +A ++
Sbjct: 474 NEYNHAEQPVMIHRAILGSFERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHVFALKL 533

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
              LK   + +E   +N+++N K+R    +KIP+I++ G++E     + IR
Sbjct: 534 KEALKKRDIFVEVLDKNDSLNKKVRSAEKQKIPMILVLGNEEVGTEILSIR 584


>gi|217031884|ref|ZP_03437386.1| hypothetical protein HPB128_3g3 [Helicobacter pylori B128]
 gi|298736935|ref|YP_003729465.1| threonyl-tRNA synthetase [Helicobacter pylori B8]
 gi|216946353|gb|EEC24958.1| hypothetical protein HPB128_3g3 [Helicobacter pylori B128]
 gi|298356129|emb|CBI67001.1| threonyl-tRNA synthetase [Helicobacter pylori B8]
          Length = 612

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 237/591 (40%), Positives = 358/591 (60%), Gaps = 37/591 (6%)

Query: 44  NGKVCDLSDPVR--EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE 101
           + KV  LSD ++  +G+  I   + P +L VIRHSCAH++A+++++++P+ +  +GP++E
Sbjct: 19  SAKVLGLSDGIKALKGTEPIYFDDSPLALEVIRHSCAHLLAQSLKALYPDAKFFVGPVVE 78

Query: 102 DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEI 161
           +GFYYDF      S ++L +IE KM+E         K+ L+ E+A E F  K +  K  +
Sbjct: 79  EGFYYDFKTSSKISEEDLPKIEAKMKEFAKSKLAITKETLTREQALERF--KGDELKHAV 136

Query: 162 LESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIY 221
           +  I   +   +Y+QGE+ DLC+GPH+ +T +    FKL K+AGAY  GD N  ML RIY
Sbjct: 137 MSKISG-DAFGVYQQGEFEDLCKGPHLPNT-RFLNHFKLTKLAGAYLGGDENNEMLIRIY 194

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLI 280
           G A+ T++ L  YL+ +EE++KRDHRKL  E+ LF   ++ G+G+  W  KG +      
Sbjct: 195 GIAFATKEGLKDYLFQIEEAKKRDHRKLGVELGLFSFDDEIGAGLPLWLPKGAR------ 248

Query: 281 SYMRRKIKD---------DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
             +R++I+D          YE +  P++L   +W+ SGH+D+Y+ NM+       T  D 
Sbjct: 249 --LRKRIEDLLSQALLLRGYEPVKGPEILKSDVWKISGHYDNYKENMYF------TTIDE 300

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
           + + +KPMNC GH+ V+   L SYR+LP+R  E+G V+R+E SG LHGL+RVR FTQDDA
Sbjct: 301 QEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDA 360

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
           H+FC+ EQ+ +E   I +    I K F F   M +LSTRP K +G D +W+ A + +K  
Sbjct: 361 HIFCSFEQIQSEVSAILDFTHKIMKAFNFSYEM-ELSTRPTKSIGDDEVWEKATSALKEA 419

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
           L       + RI+  +  G GAFYGPK +  + DA+ R WQCGTIQVD NLP RF   + 
Sbjct: 420 L------KEHRIDYKIDEGGGAFYGPKIDIKITDALRRKWQCGTIQVDMNLPERFKLAFT 473

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
           N H+    PVMIHRA+ GS ERFI I+ E+F GN P +++P Q  +  I      +A ++
Sbjct: 474 NEHNHAEQPVMIHRAILGSFERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHVFALKL 533

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
              LK   + +E   +N+++N K+R    +KIP+I++ G++E     + IR
Sbjct: 534 KEELKKRDIFVEVLDKNDSLNKKVRLAEKQKIPMILVLGNEEVETEILSIR 584


>gi|296117779|ref|ZP_06836362.1| threonine--tRNA ligase [Corynebacterium ammoniagenes DSM 20306]
 gi|295969010|gb|EFG82252.1| threonine--tRNA ligase [Corynebacterium ammoniagenes DSM 20306]
          Length = 691

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 245/638 (38%), Positives = 369/638 (57%), Gaps = 56/638 (8%)

Query: 45  GKVCDLSDPVREGSIEIITP-----EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPI 99
           G + DL+    E S+   TP     ED R  AVIRHSCAH++A+AVQ+ +P  ++ IGP 
Sbjct: 48  GTLKDLAHVPTEDSV--FTPVAACEEDGR--AVIRHSCAHVLAQAVQAEFPGTKLGIGPA 103

Query: 100 IEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQ-YLSHEKARELFESKKEAYK 158
           IE+GFYYDF  E+PF+ ++L  IEK+M++II     F +  + S+E+A E    + E +K
Sbjct: 104 IENGFYYDFQTEEPFTPEDLKVIEKRMKKIIKTGQRFERGVFASNEEAAEAL--RDEPFK 161

Query: 159 VEILESI----PAKENVTLYRQGE---------------WFDLCRGPHVRSTGQVKKFFK 199
           +E++E      P  +  T    GE               W DLCRGPH+ +T  +  F  
Sbjct: 162 LELVEDKGNVDPNSDEATEVGSGELTYYDNVNPRSNEVEWSDLCRGPHIPTTKYIPAF-T 220

Query: 200 LMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIA 259
           L + + AYWRGD N   L RIYGTAW +++ L  Y   +EE+EKRDHR+L  E+DLF   
Sbjct: 221 LTRSSAAYWRGDQNNAGLQRIYGTAWESKESLEAYQMMMEEAEKRDHRRLGAELDLFSFP 280

Query: 260 ED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRAN 317
           +D GSG+  +H  G  +   +  + RR+ I+  Y  +NTP +  Q L+++SGH   Y+  
Sbjct: 281 DDLGSGLPVFHPNGGIVRTEMEEHSRRRHIEAGYSFVNTPHITKQDLFERSGHLGFYKDG 340

Query: 318 MFAVKCAD-------DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYR 370
           MF     D       +  K  + + LKPMNCP H  +F+   +SYRELP+RL EFG+VYR
Sbjct: 341 MFPPMHVDAEYDAEGNETKPGQDYYLKPMNCPMHNLIFDTRGRSYRELPLRLFEFGNVYR 400

Query: 371 NEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR 430
            E SG +HGL R RGFTQDDAH++CT++Q+  E   + + IIS+ +D+G +   ++LSTR
Sbjct: 401 YEKSGVIHGLTRARGFTQDDAHIYCTEDQLEEELTSVLDFIISLLQDYGLDDFYLELSTR 460

Query: 431 -PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL---GEGA-FYGPKFEYILKD 485
            P K VGS+ +W+ +  I+  V +           +G+ L    EGA FYGPK     +D
Sbjct: 461 DPNKSVGSEEIWERSTAILARVAE----------KSGLELVPDPEGAAFYGPKISVQARD 510

Query: 486 AIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           AIGR WQ  T+Q+DFN+P RFN  Y  S   K  P+MIHRA+FGSIERF G+++E++ G 
Sbjct: 511 AIGRTWQMSTVQLDFNMPERFNLEYTASDGSKKQPIMIHRALFGSIERFFGVLLEHYAGA 570

Query: 546 LPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPI 605
            P WL+P Q +   ++   V + +++   L    +  + D  ++ +  KIR H+  K+P 
Sbjct: 571 FPAWLAPHQVVGIPVSEDNVGHLEQVIAKLCKKGIRADVDTSDDRMQKKIRNHTTGKVPF 630

Query: 606 IIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +++ G ++A   ++  R    +    + + +A+ ++  
Sbjct: 631 MLLAGARDAEANAVSFRFLDGSQANGIDVDEAVELIAN 668


>gi|38233973|ref|NP_939740.1| threonyl-tRNA synthetase [Corynebacterium diphtheriae NCTC 13129]
 gi|73919783|sp|Q6NGW2|SYT_CORDI RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|38200235|emb|CAE49919.1| threonyl-tRNA synthetase [Corynebacterium diphtheriae]
          Length = 687

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 235/609 (38%), Positives = 359/609 (58%), Gaps = 41/609 (6%)

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           ED R+  VIRHSC H++A+AVQ+ +P  ++ IGP IE+GFYYDFD  +PF+ ++L ++EK
Sbjct: 71  EDGRT--VIRHSCTHVLAQAVQAEFPGTKLGIGPAIENGFYYDFDVAEPFTPEDLQKLEK 128

Query: 125 KMQEIIARDSPFLKQ-YLSHEKARELFESKKEAYKVEILES-------------IPAKEN 170
           +M++I+ +   F ++ + S  +A E    K E YK+E++               I A + 
Sbjct: 129 RMKKIVKQGQKFERRIFASVAEAEEAL--KNEPYKLELIRDKGNVDPGSDEATEIGAGDL 186

Query: 171 VTLY----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTA 224
              Y    R GE  W+DLCRGPHV +T  +  F  L + + AYWRGD +   L RIYGTA
Sbjct: 187 TGYYNVNPRTGEVDWYDLCRGPHVPTTKYIPAF-ALTRSSAAYWRGDQSLAGLQRIYGTA 245

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM 283
           W +++ L +Y   + E+EKRDHR+L  E+DLF   ++ GSG   +H  G  +   +  + 
Sbjct: 246 WESKEALEEYQLMMAEAEKRDHRRLGAELDLFSFPDEIGSGFPVFHPNGGIVRLEMEEHS 305

Query: 284 RRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD-------DTIKDLRTFA 335
           RR+ I   Y  +NTP +    L+++SGH D Y   MF     D       + +K  + + 
Sbjct: 306 RRRHINAGYSFVNTPHITKGDLFKKSGHLDFYADGMFPPMQLDGEVDEEGNVVKQAQDYY 365

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC 395
            KPMNCP H  +F    +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDDAH++C
Sbjct: 366 AKPMNCPMHNLIFASRGRSYRELPLRLFEFGTVYRYEKSGVIHGLTRARGFTQDDAHIYC 425

Query: 396 TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR-PEKRVGSDALWDDAENIMKGVLDT 454
           T++Q+  E   + + IIS+ +D+G +   ++LST+ P K VGSD +W+ + +I++ V   
Sbjct: 426 TEDQLEQELTSVLDFIISLLRDYGLDDFYLELSTKDPNKFVGSDEIWEKSTSILQRV--- 482

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH 514
              +++  +         AFYGPK     +DAIGR WQ  T+Q+DFNLP RFN  Y +S 
Sbjct: 483 ---ATKSGLELVPDPAGAAFYGPKISVQARDAIGRTWQMSTVQLDFNLPERFNLEYTSSD 539

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANL 574
             K  P+MIHRA+FGSIERF G+++E++ G  P WL+P Q I   +  S  E+ +++  +
Sbjct: 540 GSKKRPIMIHRALFGSIERFFGVLLEHYAGAFPAWLAPHQVIGIPVADSFSEHLEKVTGM 599

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           L+ + +    D  ++ +  KIR H+  K+P +++ G ++    ++  R    T    V +
Sbjct: 600 LRDNGVRASVDTSDDRMQKKIRNHTTGKVPFMLLAGARDVEANAVSFRFLDGTQINGVPV 659

Query: 635 LDAIPILTK 643
             AI ++T+
Sbjct: 660 DKAIGVITQ 668


>gi|300741607|ref|ZP_07071628.1| threonine--tRNA ligase [Rothia dentocariosa M567]
 gi|300380792|gb|EFJ77354.1| threonine--tRNA ligase [Rothia dentocariosa M567]
          Length = 677

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 248/639 (38%), Positives = 363/639 (56%), Gaps = 55/639 (8%)

Query: 37  KAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVA 95
           K V   +NG + DLS  + EG ++E +  ++P  L V+RHS AH+MA+AVQ    + ++ 
Sbjct: 35  KIVVARVNGTLVDLSHKLSEGDTVEPVFIDEPDGLNVLRHSAAHVMAQAVQEYRKDAKLG 94

Query: 96  IGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKE 155
           IGP I DGFY+DFD  +PF+ ++L +IEK M +II     F ++ ++H +A E  E K E
Sbjct: 95  IGPYITDGFYFDFDVAEPFTPEDLKKIEKSMIKIIKSGQLFRRRVVTHAEAVE--EMKNE 152

Query: 156 AYKVEILE-----------------SIPAKENVTLY-----RQGE--WFDLCRGPHVRST 191
            YK+E+L                   + A E +T+Y     + GE  W DLCRGPH+ +T
Sbjct: 153 PYKLELLSLSQGPGSGADAAEGASVEVGAGE-ITIYDNVHPKTGEVLWNDLCRGPHLPNT 211

Query: 192 GQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAR 251
             +   + LM+  GAYWRG    PML RIYGTAW T+ EL +Y + + E+E+RDHR+L +
Sbjct: 212 KLIANGYALMRAGGAYWRGSEKNPMLQRIYGTAWPTKDELVEYKHRIAEAERRDHRRLGK 271

Query: 252 EMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSG 309
           E+DLF   ++ G G+   H KG  I + +  Y+R R I + ++ ++TP +  + L+  SG
Sbjct: 272 ELDLFSFPKNIGPGLPVIHPKGGVIKREMEDYVRARHIAEGFQYVSTPHISKEDLFYTSG 331

Query: 310 HWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVY 369
           H   Y   MF     D+       + LK MNCP H  ++    +SYRELP+R  EFG+VY
Sbjct: 332 HLPYYADGMFPAMELDNG-----NYRLKAMNCPMHNEIYRSRGRSYRELPLRFFEFGTVY 386

Query: 370 RNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
           R+E SG L GL RVR  TQDD+H + TKEQ  +E   + N ++S+ +DFG     ++LST
Sbjct: 387 RDEKSGVLQGLTRVRMITQDDSHSYVTKEQAPDEVRHLLNFMLSLLEDFGMTDFYLELST 446

Query: 430 R------PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL----GEGAFYGPKF 479
           R       +K +G+D  W+ A  +++ V             TG+ L    G  AFYGPK 
Sbjct: 447 RDTEGDKKDKFIGTDEQWEQATAVLEQVAK----------ETGLELVPDPGGAAFYGPKI 496

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
               KDAIGR WQ  T+Q DFN PSRF   Y  +      PVMIH A FGSIERF+G++ 
Sbjct: 497 SVQAKDAIGRTWQMSTVQYDFNQPSRFGLEYQAADGSIQEPVMIHSAKFGSIERFLGVLT 556

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E++ G  P WLSP+Q I   +  +  +Y  EIA+ L+   + +E D+ ++    KIR  S
Sbjct: 557 EHYAGAFPAWLSPVQVICVPVAEAFNDYMTEIADKLREQGVRVEVDYGSDRFTKKIRTAS 616

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
            +K+P I+I G ++A   ++  R  G+     V + +A+
Sbjct: 617 TEKVPFILIAGGEDAEAGAVSFRFRGNKQENGVPVDEAV 655


>gi|300858607|ref|YP_003783590.1| threonyl-tRNA synthetase [Corynebacterium pseudotuberculosis FRC41]
 gi|300686061|gb|ADK28983.1| Threonyl-tRNA synthetase [Corynebacterium pseudotuberculosis FRC41]
 gi|302206319|gb|ADL10661.1| Threonyl-tRNA synthetase [Corynebacterium pseudotuberculosis C231]
 gi|302330876|gb|ADL21070.1| Threonyl-tRNA synthetase [Corynebacterium pseudotuberculosis 1002]
 gi|308276561|gb|ADO26460.1| Threonyl-tRNA synthetase [Corynebacterium pseudotuberculosis I19]
          Length = 689

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 245/630 (38%), Positives = 366/630 (58%), Gaps = 40/630 (6%)

Query: 45  GKVCDLS-DPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG 103
           G + DLS  P R+  +  +         VIRHSC H++A+AVQ+ +P  ++ IGP IE+G
Sbjct: 48  GTLRDLSFIPERDMQVTPVPANTEEGREVIRHSCTHVLAQAVQAEFPGTKLGIGPAIENG 107

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQ-YLSHEKARELFESKKEAYKVEIL 162
           FYYDFD  +PF+ ++L +IEK+M++II +   F ++ + S E+A E    K E YK+E++
Sbjct: 108 FYYDFDVAEPFTPEDLKRIEKRMKKIIKQGQKFERRTFASVEEASEAL--KNEPYKLELI 165

Query: 163 --------ESIPAKE----NVTLY-----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKV 203
                   +S  A E    ++T Y     R GE  W+DLCRGPHV +T  +  F  L + 
Sbjct: 166 RDKGNVDPDSDEATEVGAGDLTGYYNLNPRTGEVDWYDLCRGPHVPTTKYIPAF-SLTRS 224

Query: 204 AGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-G 262
           + AYWRGD +   L RIYGTAW +++ L +Y   + E+EKRDHR+L  E+DLF   ++ G
Sbjct: 225 SAAYWRGDQSLADLQRIYGTAWESKEALEEYQTMMAEAEKRDHRRLGAELDLFSFPDEIG 284

Query: 263 SGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG   +H  G  +   +  + RR+ I   Y  +NTP +    L+++SGH D Y   MF  
Sbjct: 285 SGFPVFHPNGGVVRLEMEEHSRRRHIAAGYSFVNTPHITKGDLFKKSGHLDFYADGMFPP 344

Query: 322 KCADDTI-------KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
              D  I       K  + +  KPMNCP H  +F    +SYRELP+RL EFG+VYR E S
Sbjct: 345 MQLDGEIDEDGNVTKQAQDYYAKPMNCPMHNLIFASRGRSYRELPLRLFEFGTVYRYEKS 404

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR-PEK 433
           G +HGL R RGFTQDDAH++CT++Q+  E   + + IIS+ KD+G +   ++LST+ P K
Sbjct: 405 GVIHGLTRARGFTQDDAHIYCTEDQLEAELTSVLDFIISLLKDYGLDDFYLELSTKDPNK 464

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
            VGSD +WD + +I++ V      ++Q  +         AFYGPK     +DAIGR WQ 
Sbjct: 465 FVGSDEIWDLSTSILERV------ATQSGLELVPDPAGAAFYGPKISVQARDAIGRTWQM 518

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI 553
            T+Q+DFNLP RFN  Y      K  P+MIHRA+FGSIERF G+++E++ G  P WL+P 
Sbjct: 519 STVQLDFNLPERFNLEYTAPDGSKRRPIMIHRALFGSIERFFGVLLEHYAGAFPAWLAPH 578

Query: 554 QAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
           Q I   +  + V++ +E+   L+   +  + D  ++ +  KIR H+  K+P +++ G ++
Sbjct: 579 QVIGIPVADAFVDHLEEMMAQLRQRGIRADVDTSDDRMQKKIRNHTTGKVPFMVLAGARD 638

Query: 614 ASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
               ++  R    T    V +  A+ I+ +
Sbjct: 639 VEAGAVSFRFLDGTQVNGVPVEKAVEIIDQ 668


>gi|229552552|ref|ZP_04441277.1| threonine--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
 gi|258539925|ref|YP_003174424.1| threonyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705]
 gi|229314104|gb|EEN80077.1| threonine--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
 gi|257151601|emb|CAR90573.1| Threonyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705]
          Length = 657

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 239/636 (37%), Positives = 378/636 (59%), Gaps = 24/636 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           + +TFPDGS+K FP   T   + E IS SLAKKAVA  ++ ++   ++P+   G ++I+T
Sbjct: 3   LDITFPDGSVKQFPDGTTVKAITEGISNSLAKKAVAGKLDDELIAYNEPIAHSGKLQIMT 62

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
            +D   L V+R + A ++A A+++++P++    G  IEDGFYYD D+ +   S D+L  +
Sbjct: 63  KDDAEGLTVLRQTAAFVLAAALKALYPDIHFGKGQAIEDGFYYDTDRADGQVSVDDLPTV 122

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           +KKM+EII  ++      LS  +A + F  K + +K +++E+  A + +  Y+ G++ D 
Sbjct: 123 QKKMEEIIKANAALEPVELSRAEAFDRF--KDDPFKKQLVEA--AGDPIKGYKLGDFVDF 178

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
                + S   +K F KL+ VAGAYW+G S+ PML RIYGTA+ +++ L       +E+ 
Sbjct: 179 EEKVLLPSLKDLKHF-KLLSVAGAYWQGKSSNPMLQRIYGTAYWSEKGLEDDAKRRKEAA 237

Query: 243 KRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVL 300
           +RDHR + R++DLF +  + G+G+ +W   G  I + +  Y+  ++I D YE + TP + 
Sbjct: 238 ERDHRVIGRDLDLFFVDPKVGAGLPYWMPNGATIRRVIERYIIDKEIADGYEHVYTPVLA 297

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  L++ SGHWD YR +MF        + D     L+PMNCP H+ ++NH ++SYRELP+
Sbjct: 298 NLDLYKTSGHWDHYREDMFPPM----DMGDGEMLELRPMNCPSHIQIYNHHIRSYRELPL 353

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G ++R E SG+L GL RVR  T +D H F   +Q+  E  KI  LI+ +Y+DF  
Sbjct: 354 RIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQVQEEFKKILRLIMDVYEDFNI 413

Query: 421 EKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
                +LS R     EK    D +W  +++++KG +D +       ++     GE AFYG
Sbjct: 414 TDYSFRLSYRDPKNTEKYFDDDEMWTRSQSMLKGAMDDL------HLDYYEAEGEAAFYG 467

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK +   K A+G D    TIQ+DF LP RFN  YV    E+  PVMIHR + G++ERFI 
Sbjct: 468 PKLDIQTKTALGNDETMSTIQLDFMLPERFNLTYVGKDGEEHRPVMIHRGIVGTMERFIA 527

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            + E +KG  P WL+P QA++  + +   ++Y   I   +++  L ++ D RNE + YKI
Sbjct: 528 YLTEIYKGAFPTWLAPTQAVLIPVNNDLHLDYVNRIKRQMQAAGLRVKVDDRNEKMGYKI 587

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
           RE   KKIP  ++ GDKE ++ ++ +RR+G   T++
Sbjct: 588 REAQTKKIPYTVVVGDKELNDAAVSVRRYGDEHTEE 623


>gi|296110556|ref|YP_003620937.1| threonyl-tRNA synthetase [Leuconostoc kimchii IMSNU 11154]
 gi|295832087|gb|ADG39968.1| threonyl-tRNA synthetase [Leuconostoc kimchii IMSNU 11154]
          Length = 654

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 240/647 (37%), Positives = 381/647 (58%), Gaps = 26/647 (4%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEI 61
           S++KLTFPDG++K F       +VAESIS+SLAKK+V+  +NG    ++D ++  G  ++
Sbjct: 2   SELKLTFPDGAVKTFAEGTKPLEVAESISKSLAKKSVSAKLNGDYVGMNDSIQSSGDFQL 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSI--WPEVQVAIGPIIEDGFYYDFDKE--QPFSSD 117
           IT  D  +L+++RHS +H++A+A++ I  +  +   +GP I++GFYYD D       S +
Sbjct: 62  ITTSDDEALSLLRHSASHLLAQALKRIPKFSNMHFGVGPFIDNGFYYDTDNGIGNQVSVE 121

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +  +IE  M +I+  D P + + ++ E+A E+F S  + YK+E++  +P  E +T+  QG
Sbjct: 122 DFPEIEAMMHKIVKEDLPIVSRQVTREEALEMFAS--DPYKIELITDLPVDEKITIAIQG 179

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           +  +L +G  V ST  VK F KL  VAGAYWRG S+ PM+ RIYG A   Q ++   +  
Sbjct: 180 DHVELDKGGLVPSTRWVKNF-KLTSVAGAYWRGKSSNPMMQRIYGIAEWKQADVDAEVQR 238

Query: 238 LEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEIN 295
            EE+++RDHR + R++DLF  +++ GSG+  W   G  I + +  Y+  K + + Y+ + 
Sbjct: 239 REEAKERDHRTIGRDLDLFFTSQEVGSGLPVWLPNGATIRRQVERYITDKELANGYQHVY 298

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP + + +L++ SGHWD YR +MF        + D     L+PMNCP H+ VF H  +SY
Sbjct: 299 TPVLSNLNLYKTSGHWDHYREDMFPPM----DMGDGEFLELRPMNCPSHIMVFKHKPRSY 354

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP+R+AE G ++R E SG+L GL RVR  T +D H F   E++  E   I  +++ +Y
Sbjct: 355 RELPIRIAELGMMHRYEKSGALTGLSRVREMTLNDGHTFVEPEKLEEEFKSILTMMMEVY 414

Query: 416 KDFGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
           +DF       +LS R     EK    D +W+ ++  +K  +D +K      ++     GE
Sbjct: 415 RDFNITDYRFRLSYRDPKNTEKYFDDDEMWEKSQAQLKRAMDDLK------LDYYEAEGE 468

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH-PVMIHRAVFGS 530
            AFYGPK +   K A+G +    TIQ+DF LP RFN  Y+ +  +  H PVM+HR + G+
Sbjct: 469 AAFYGPKLDVQTKTALGGEETMSTIQLDFLLPERFNLTYIGADGQDNHRPVMLHRGIVGT 528

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNE 589
           +ERF   +IE +KG  P WLSP+Q  +  +  +A  +YA  +   L++  L +  + +  
Sbjct: 529 MERFTAYLIEMYKGAFPTWLSPLQVQIIPVNLAAHGDYANAVQKELQAAGLRVNVEKKEA 588

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
            + Y IRE    K+P  ++ GD E +E+++ IR++G   TQ V+L D
Sbjct: 589 KMGYLIREAQTNKVPYTLVLGDSEVNEQTVTIRKYGEEKTQTVALAD 635


>gi|229825871|ref|ZP_04451940.1| hypothetical protein GCWU000182_01235 [Abiotrophia defectiva ATCC
           49176]
 gi|229789891|gb|EEP26005.1| hypothetical protein GCWU000182_01235 [Abiotrophia defectiva ATCC
           49176]
          Length = 604

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 235/566 (41%), Positives = 343/566 (60%), Gaps = 21/566 (3%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQE 128
           L V RHS AH++A+AV  I+ E VQ+AIGP I+DGFYYDF   +  + D+   IE KM+E
Sbjct: 7   LQVYRHSLAHVLAKAVFEIFGESVQIAIGPQIDDGFYYDFVLPRAVTEDDYKVIEDKMRE 66

Query: 129 IIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF-DLCRGPH 187
           I+ R   + ++ L+ E+A E F+ +K  +KVEI+  +P    ++ Y  G+ F DLCRGPH
Sbjct: 67  ILKRKENWTRKELTKEEALEKFKDQK--FKVEIINDLPEDAIISTYNTGDDFCDLCRGPH 124

Query: 188 VRSTGQVKKF-FKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDH 246
           + ++ ++    F++   +GAYWRGD  R  L RIY  A+ T+ EL  +L  + E+ +RDH
Sbjct: 125 IENSAELLNVAFQVKSASGAYWRGDEKRDRLQRIYVYAFPTKDELKAHLNLIREALERDH 184

Query: 247 RKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLW 305
           +KL  ++DLF   E   G+ +W  +GW+++Q LI++ R+  +K  Y+EI+ P + ++ LW
Sbjct: 185 KKLGPKLDLFMFNETAPGMPYWLPRGWRLYQELINFWRKIHVKHGYQEISAPIINNRKLW 244

Query: 306 QQSGHWDSYRANMFAVKCADD-----TIKDLR-----TFALKPMNCPGHVAVFNHGLKSY 355
             SGHW  Y  NMF +   DD     T++++      TFA KPMNCP  +  +   + SY
Sbjct: 245 LISGHWAHYVNNMFIIPGFDDDLTQRTLQNIELDSDSTFAAKPMNCPNAMLTYKRTVHSY 304

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           +ELP+R  E   ++R E SG L+GL RV+ F QDD H F  + Q+  E   +  +   IY
Sbjct: 305 KELPIRYNEIDVIHRKEKSGQLNGLFRVQEFRQDDDHTFVMESQIEEEIADVMEVADQIY 364

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
             FG      +LSTRPE  +G   +WD AE  +K +LD         +N G    +GAFY
Sbjct: 365 STFGI-TYRAELSTRPEDFMGDIEVWDRAEAALKKILDKKYGEGGYEVNEG----DGAFY 419

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +KDA+GR+WQCGTIQ+DF LP  F   Y +S      PV+IHRA+FGS ERFI
Sbjct: 420 GPKIDLQMKDALGREWQCGTIQLDFQLPHNFELTYQDSDGTIKEPVVIHRAIFGSFERFI 479

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
           GI+IEN+KG  P W+SP Q  +  I +   EYA+EI + L    + +E ++ ++ +N KI
Sbjct: 480 GILIENYKGEFPFWISPYQVAIVPIRTEHNEYAKEIEDALYEMGIRVEANYDDKNMNEKI 539

Query: 596 REHSIKKIPIIIICGDKEASERSIGI 621
           +   + K P II+ GDKE  ER++ I
Sbjct: 540 KGFKLMKDPYIIVVGDKEKEERTVSI 565


>gi|307636813|gb|ADN79263.1| threonyl tRNA sythetase [Helicobacter pylori 908]
 gi|325995402|gb|ADZ50807.1| Threonyl-tRNA synthetase [Helicobacter pylori 2018]
          Length = 612

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 238/591 (40%), Positives = 357/591 (60%), Gaps = 37/591 (6%)

Query: 44  NGKVCDLSDPVR--EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE 101
           + KV  LSD ++  +GS  I   + P +L VIRHSCAH++A+++++++P+ +  +GP++E
Sbjct: 19  SAKVLGLSDGIKALKGSEPIFFDDSPLALEVIRHSCAHLLAQSLKALYPDAKFFVGPVVE 78

Query: 102 DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEI 161
           +GFYYDF      S ++L +IE KM+E         K+ L+ E+A E F  K +  K  +
Sbjct: 79  EGFYYDFKTSSKISEEDLPKIEAKMKEFAKLKLAIAKEILTREQALERF--KGDELKHAV 136

Query: 162 LESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIY 221
           +  I   +   +Y+QGE+ DLC+GPH+ +T +    FKL K+AGAY  GD N  ML RIY
Sbjct: 137 MSKISG-DIFGVYKQGEFEDLCKGPHLPNT-RFLNHFKLTKLAGAYLGGDENNEMLIRIY 194

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLI 280
           G A+ T++ L  YL+ +EE++KRDHRKL  E+ LF   ++ G+G+  W  KG +      
Sbjct: 195 GIAFATKEGLKDYLFQIEEAKKRDHRKLGVELGLFSFDDEIGAGLPLWLPKGAR------ 248

Query: 281 SYMRRKIKD---------DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
             +R++I+D          YE +  P++L   +W+ SGH+D+Y+ NM+       T  D 
Sbjct: 249 --LRKRIEDLLSKALLLRGYEPVKGPEILKSDVWKISGHYDNYKENMYF------TTIDE 300

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
           + + +KPMNC GH+ V+   L SYR+LP+R  E+G V+R+E SG LHGL+RVR FTQDDA
Sbjct: 301 QEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDA 360

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
           H+FC+ EQ+ +E   I +    I K F F   M +LSTRP K +G D +W+ A N +K  
Sbjct: 361 HIFCSFEQIQSEVSAILDFTHKIMKAFDFSYEM-ELSTRPAKSIGDDEVWEKATNALKEA 419

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
           L       + RI+  +  G GAFYGPK +  + DA+ R WQCGTIQVD NLP RF   + 
Sbjct: 420 L------KEHRIDYKIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDMNLPERFKLAFT 473

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
           N  +    PVMIHRA+ GS ERFI I+ E+F GN P +++P Q  +  I      +A ++
Sbjct: 474 NERNHAEQPVMIHRAILGSFERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHVFALKL 533

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
              LK   + +E   +N+++N K+R    +KIP+I++ G++E     + IR
Sbjct: 534 KEELKKRDIFVEVLDKNDSLNKKVRLAEKQKIPMILVLGNEEVETEILSIR 584


>gi|154487350|ref|ZP_02028757.1| hypothetical protein BIFADO_01200 [Bifidobacterium adolescentis
           L2-32]
 gi|154083868|gb|EDN82913.1| hypothetical protein BIFADO_01200 [Bifidobacterium adolescentis
           L2-32]
          Length = 677

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 249/633 (39%), Positives = 361/633 (57%), Gaps = 43/633 (6%)

Query: 36  KKAVAVAINGKVCDLSDPVREGSI-EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           K  +AV +NG+  DL   + +G + E I  +    +A++RHS  H+MA+AVQ I P+ ++
Sbjct: 31  KNIIAVRLNGEPRDLYTELHDGDVVEPIALDSEDGVAIMRHSATHVMAQAVQEIRPDAKL 90

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKAR------- 147
            +GP+I+DGFYYDFD E PF+ ++L +IEK+MQ II     F ++ ++ E+A        
Sbjct: 91  GVGPVIKDGFYYDFDVETPFTPEDLKEIEKRMQRIIKSSQSFRRRVVTEEEALAEEADQP 150

Query: 148 ---ELFESKKEAYKVEILESIPAKENVTLY----RQGE--WFDLCRGPHVRSTGQVKKFF 198
              EL + K+     E    I  KE ++ Y    R+G   W DLCRGPH+ +T  +K F 
Sbjct: 151 YKLELIKDKEAHLDPEAATEISGKE-LSFYDNVDREGNVVWKDLCRGPHLPNTRYIKAF- 208

Query: 199 KLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI 258
           K+ + A AYWRG    PML RIYG A+ T+++L  Y   LEE+ KRDHRKL  EMDLF  
Sbjct: 209 KIERSAAAYWRGSEANPMLQRIYGAAFATKEDLKAYQTRLEEAAKRDHRKLGAEMDLFSF 268

Query: 259 AED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
            ++ G G+  +H KG  +   +  Y R    K  Y  + TP +    L++ SGH   Y+ 
Sbjct: 269 PDEIGPGLAVFHPKGAAVINAMEDYSREMHRKHHYSFVQTPHITKGGLYETSGHLQWYKD 328

Query: 317 NMFAVKCAD-------DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVY 369
           +M+     D       + IK    + LKPMNCP H  +F    +SYRELP+RL EFG+VY
Sbjct: 329 SMYPPMRLDEEKDENGNVIKQGFDYYLKPMNCPMHNLIFKSRQRSYRELPLRLFEFGTVY 388

Query: 370 RNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
           R E SG +HGL RVRG TQDD+H++CT+EQM +E   +   ++ + KDFG +   ++LST
Sbjct: 389 RYEKSGEVHGLTRVRGLTQDDSHIYCTREQMKDELKSLLTFVLGLLKDFGLDDFYLELST 448

Query: 430 R-PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIG 488
           + P K VGSD +W++A N +  V    K S  D ++        AFYGPK     +DAIG
Sbjct: 449 KDPHKYVGSDEIWEEATNTLAEV---AKESGLDLVDDPC---GAAFYGPKISVQARDAIG 502

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPL 548
           R WQ  TIQ+DFNLP RF   Y+ +      PVMIHRA+FGSIERF  +++E++ G  P 
Sbjct: 503 RTWQVSTIQLDFNLPERFKLEYIAADGTHQRPVMIHRALFGSIERFFAVLLEHYAGAFPA 562

Query: 549 WLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIII 608
           WL+P+Q +   +      + Q+    L+   +  E D  ++    KIR  S  K P I+I
Sbjct: 563 WLAPVQVLGVPVADEFAPHLQKFIASLEEETVRCEIDLSDDRFGKKIRNASKSKAPFILI 622

Query: 609 CGDKEASERSIGIR-RFGSTTTQKVSLLDAIPI 640
            G+++ +  ++  R R GS        L+ +P+
Sbjct: 623 VGEEDMNNNAVSFRFRDGSQ-------LNGVPV 648


>gi|317010401|gb|ADU84148.1| threonyl-tRNA synthetase [Helicobacter pylori SouthAfrica7]
          Length = 612

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 240/603 (39%), Positives = 360/603 (59%), Gaps = 37/603 (6%)

Query: 44  NGKVCDLSDPVR--EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE 101
           + KV  LSD V+  +G+  I   + P +L +IRHSCAH++A+++++++P+ +  +GP++E
Sbjct: 19  SAKVLGLSDGVKALKGTEPIYFDDSPLALEMIRHSCAHLLAQSLKALYPDAKFFVGPVVE 78

Query: 102 DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEI 161
           +GFYYDF      S ++L +IE KM+E         K+ L+ E+A E F  K +  K  +
Sbjct: 79  EGFYYDFKTASKISEEDLPKIEAKMKEFAKSKLAITKEVLTREQALERF--KGDELKHAV 136

Query: 162 LESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIY 221
           +  I   +   +Y+QGE+ DLC+GPH+ +T +    FKL K+AGAY  GD    ML RIY
Sbjct: 137 MSKISG-DAFGVYQQGEFEDLCKGPHLPNT-RFLNHFKLTKLAGAYLGGDEKNEMLIRIY 194

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLI 280
           G A+ T++ L  YL+ +EE++KRDHRKL  E+ LF   ++ G+G+  W  KG +      
Sbjct: 195 GIAFATKEGLKDYLFQIEEAKKRDHRKLGVELGLFSFDDEIGAGLPLWLPKGAR------ 248

Query: 281 SYMRRKIKD---------DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
             +R++I+D          YE +  P++L   +W+ SGH+D+Y+ NM+       T  D 
Sbjct: 249 --LRKRIEDLLSKALLLRGYEPVKGPEILKSDVWKISGHYDNYKENMYF------TTIDE 300

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
           + + +KPMNC GH+ V+   L SYR+LP+R  E+G V+R+E SG LHGL+RVR FTQDDA
Sbjct: 301 QEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDA 360

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
           H+FC+ EQ+ +E   I +    I K F F   M +LSTRP K +G D +W+ A N +K  
Sbjct: 361 HIFCSFEQIQSEVSAILDFTHKIMKAFDFSYEM-ELSTRPAKSIGDDKVWEKATNALKEA 419

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
           L       +  IN  +  G GAFYGPK +  + DA+ R WQCGTIQVD NLP RF   + 
Sbjct: 420 L------KEHHINYKIDEGGGAFYGPKIDIKITDALRRKWQCGTIQVDMNLPERFKLAFT 473

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
           N H+    PVMIHRA+ GS ERFI I+ E+F GN P +++P Q  +  I      +A ++
Sbjct: 474 NEHNNAEQPVMIHRAILGSFERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHGFALKL 533

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
              LK   + +E   +N+++N K+R    +KIP+I++ G++E     + IR     T  K
Sbjct: 534 KEELKKCDIFVEVLDKNDSLNKKVRLAEKQKIPMILVLGNEEVETEMLSIRDREKQTQYK 593

Query: 632 VSL 634
           + L
Sbjct: 594 MPL 596


>gi|296394216|ref|YP_003659100.1| threonyl-tRNA synthetase [Segniliparus rotundus DSM 44985]
 gi|296181363|gb|ADG98269.1| threonyl-tRNA synthetase [Segniliparus rotundus DSM 44985]
          Length = 683

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 240/616 (38%), Positives = 365/616 (59%), Gaps = 46/616 (7%)

Query: 44  NGKVCDLS-DPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIED 102
           +G + DLS  P  +  +E +        +VIRHS AH++A+AVQ  +PE ++ IGP I+D
Sbjct: 46  DGALRDLSWAPEADAEVEPVLANTEDGRSVIRHSAAHVLAQAVQQEFPEAKLGIGPPIKD 105

Query: 103 GFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL 162
           GFYYDF  ++ F+ ++LA++E +M++II     F ++ +  E+A+   E   E +K+E++
Sbjct: 106 GFYYDFRVDRAFTPEDLARLETRMRKIIKASQRFSRRVVEVEEAKA--ELANEPFKLELI 163

Query: 163 ESIPAKEN----------VTLY-----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAG 205
                 ++          +T+Y     R GE  W DLCRGPH+ +T  +  F KL + + 
Sbjct: 164 GDKSGVDDPEVMEVGGTELTVYDNLNPRTGEREWGDLCRGPHIPTTKHIPAF-KLTRSSA 222

Query: 206 AYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSG 264
           AYWRGD +R  L RIYGTAW + + L ++L  + E+E+RDHRKL  E+DLF   ++ GSG
Sbjct: 223 AYWRGDQSRDSLQRIYGTAWESAEALERHLALIAEAERRDHRKLGAELDLFSFPDELGSG 282

Query: 265 VIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKC 323
           +  +H KG  + + L  Y R K I+  YE +NTP +   HL++ SGH D Y   MF    
Sbjct: 283 LPVFHPKGGVLRKELEDYSRAKHIEAGYEFVNTPHITKSHLYEVSGHLDWYADGMFPPMH 342

Query: 324 ADDTI-------KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            D+ +       K  + + LKPMNCP H  +F    +SYRELP+RL EFGSVYR E SG 
Sbjct: 343 VDEELHEDGSVRKPGQDYYLKPMNCPMHNLIFRSRGRSYRELPLRLFEFGSVYRYEKSGV 402

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR-V 435
           +HGL RVRG TQDDAH++CT+ QM +E       ++ + +D+G +   ++LST+ E++ V
Sbjct: 403 VHGLTRVRGMTQDDAHIYCTRAQMKDELSTTLQFVLDLLRDYGLDDFYLELSTKDEQKFV 462

Query: 436 GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL----GEGAFYGPKFEYILKDAIGRDW 491
           G+D +W +A   +  V +           +G+ L    G  AFYGPK     KDA+GR W
Sbjct: 463 GADEIWAEATRTLSEVAEA----------SGLTLVPDPGGAAFYGPKISVQAKDALGRTW 512

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLS 551
           Q  TIQ+DFNLP RF+  Y      K  PVMIHRA+FGSIERFIG+++E++ G  P+WL+
Sbjct: 513 QMSTIQLDFNLPERFDLEYTGPSGHKERPVMIHRALFGSIERFIGVLVEHYAGAFPMWLA 572

Query: 552 PIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
           P+Q +   ++   V + +E  + L++  +    D  ++ +  KI  H+ +KIP +++ G 
Sbjct: 573 PVQVMGIPVSEDHVPHLREFVDSLRAGGVRAHIDSSDDRMQKKIFTHTAQKIPFLVLAGG 632

Query: 612 KEASERSIGIR-RFGS 626
           ++   +++  R R GS
Sbjct: 633 RDVEAQTVSFRFRDGS 648


>gi|213966110|ref|ZP_03394297.1| threonyl-tRNA synthetase [Corynebacterium amycolatum SK46]
 gi|213951208|gb|EEB62603.1| threonyl-tRNA synthetase [Corynebacterium amycolatum SK46]
          Length = 686

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 246/636 (38%), Positives = 365/636 (57%), Gaps = 52/636 (8%)

Query: 45  GKVCDLS-DPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG 103
           G + DLS  P  E   E +    P    VIRHS  H+MA+AVQ  +P  ++ IGP I++G
Sbjct: 44  GNLKDLSFKPEVETVFEPVPANTPDGRDVIRHSATHVMAQAVQLEFPGTKLGIGPAIDNG 103

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFES-KKEAYKVEIL 162
           FYYDF  ++PFS ++L +IEK+M++II     F  +  + E A E  E+   E YK+E++
Sbjct: 104 FYYDFRVDEPFSPEDLKRIEKRMKKIIKSGQRF--ERFAFESADEAQEALADEPYKLELI 161

Query: 163 ----------------ESIPAKENVTLYR-------QGEWFDLCRGPHVRSTGQVKKFFK 199
                           +   A   +T YR       + EWFDLCRGPHV +T  +  F K
Sbjct: 162 VEKSAGKVSEDDEANVDVGGAGTTLTGYRNVNPRTGETEWFDLCRGPHVPTTRYIPAF-K 220

Query: 200 LMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIA 259
           + + + AYWRGD +R  L R+YGTAW +++ L +YL  + E+EKRDHR+L  E+DLF   
Sbjct: 221 ITRSSAAYWRGDQSRDNLQRVYGTAWESKEALDEYLDRMLEAEKRDHRRLGSELDLFSFP 280

Query: 260 ED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRAN 317
           ++ GSG   +H KG  I   +  + RR+ I+  Y+ +NTP V    L+++SGH D Y   
Sbjct: 281 DEIGSGFPVFHVKGGIIRNEMEQHSRRRHIEAGYDFVNTPHVTKGDLFKKSGHLDFYADG 340

Query: 318 MFAVKCAD-------DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYR 370
           MF     D       +  K  + + +KPMNCP H  +F    +SYRELP+R+ EFG+VYR
Sbjct: 341 MFPPMQLDGEYDEHGNCTKAPQDYYVKPMNCPMHNLIFASRGRSYRELPIRMFEFGTVYR 400

Query: 371 NEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR 430
            E SG +HGL R RGFTQDDAH++CT++Q+  E   + + IIS+ +D+G +   ++LST+
Sbjct: 401 YEKSGVIHGLTRARGFTQDDAHIYCTEDQLEEELTNVLDFIISLLRDYGLDDFYLELSTK 460

Query: 431 PEKR-VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL----GEGAFYGPKFEYILKD 485
            EK+ VGSD +W+ +  I++ V D           +G+ L    G  AFYGPK     +D
Sbjct: 461 DEKKFVGSDEIWEKSTAILQRVADA----------SGLELVPDPGGAAFYGPKISVQARD 510

Query: 486 AIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           AIGR WQ  T+Q+DFNLP RF   Y      K  P+MIHRA+FGSIERF G+++E++ G 
Sbjct: 511 AIGRTWQMSTVQLDFNLPERFELEYTAPDGTKKRPIMIHRALFGSIERFFGVLLEHYAGA 570

Query: 546 LPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPI 605
            P WL+P Q +   +    + + ++ A  LKS  + +  D  ++ +  KIR H+  K+P 
Sbjct: 571 FPAWLAPEQVVGIPVADDCIPHLEDFAAQLKSRGIRVHVDTSDDRMQKKIRNHTQAKVPF 630

Query: 606 IIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           +I+ G ++    ++  R    T    V++  A+ I+
Sbjct: 631 MILAGARDIEAGAVSFRFLDGTQINGVAVEKAVDII 666


>gi|145295791|ref|YP_001138612.1| threonyl-tRNA synthetase [Corynebacterium glutamicum R]
 gi|140845711|dbj|BAF54710.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 686

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 240/632 (37%), Positives = 359/632 (56%), Gaps = 46/632 (7%)

Query: 45  GKVCDLSD-PVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG 103
           G++ DLS  P    +   +        AVIRHSCAH++A+AVQ+ +P  ++ IGP IE+G
Sbjct: 47  GQLKDLSHVPEATATFTAVPANTDDGRAVIRHSCAHVLAQAVQAEFPGTKLGIGPAIENG 106

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE 163
           FYYDFD  +PF+ ++L  IEK+M++II     F ++ +         E K E YK+E+++
Sbjct: 107 FYYDFDVAEPFTPEDLKTIEKRMKKIIKTGQKFERR-VYESAEAAAEELKNEPYKLELIQ 165

Query: 164 SI----PAKENVTLYRQGE---------------WFDLCRGPHVRSTGQVKKFFKLMKVA 204
                 P  +  T    GE               W DLCRGPH+ +T  +  F  L + +
Sbjct: 166 DKGNVDPNSDEATEVGAGELTAYDNVNPRTSEVEWSDLCRGPHIPTTRYIPAF-ALTRSS 224

Query: 205 GAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GS 263
            AYWRGD +   L RIYGTAW  ++ L  Y   L E+EKRDHR+L  E+DLF   +D GS
Sbjct: 225 AAYWRGDQDNAGLQRIYGTAWEDKESLDAYQTMLAEAEKRDHRRLGTELDLFSFPDDLGS 284

Query: 264 GVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK 322
           G+  +H  G  +   +  + RR+ I   Y  +NTP +  Q L+++SGH   Y+  MF   
Sbjct: 285 GLPVFHPNGGIVRNEMEDHSRRRHIAAGYSFVNTPHITKQDLFERSGHLGFYKDGMFPPM 344

Query: 323 CAD-------DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
             D       +  K  + + LKPMNCP H  +F+   +SYRELP+RL EFG+VYR E SG
Sbjct: 345 QVDAEFDEDGNVTKPGQEYYLKPMNCPMHNLIFDSRGRSYRELPLRLFEFGNVYRYEKSG 404

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR-PEKR 434
            +HGL R RGFTQDDAH++CT++Q+  E   + + I+S+ +D+G +   ++LSTR P+K 
Sbjct: 405 VIHGLTRARGFTQDDAHIYCTEDQLEAELTSVLDFILSLLRDYGLDDFYLELSTRDPKKS 464

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL---GEGA-FYGPKFEYILKDAIGRD 490
           VGSD +W+ +  I+  V            N+G+ L    EGA FYGPK     +DAIGR 
Sbjct: 465 VGSDEIWERSTEILNRVA----------TNSGLELVPDPEGAAFYGPKISVQARDAIGRT 514

Query: 491 WQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL 550
           WQ  T+Q+DFN+P RFN  Y +S   K  P+MIHRA+FGSIERF G+++E++ G  P WL
Sbjct: 515 WQMSTVQLDFNMPERFNLEYTSSDGSKQQPIMIHRALFGSIERFFGVLLEHYAGAFPAWL 574

Query: 551 SPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           +P Q +   +    + + + I   L+   +  + D  ++ +  KIR H+  K+P +++ G
Sbjct: 575 APHQVMGIPVADDCIPHLETITAQLREKGIRADVDTSDDRMQKKIRNHTTGKVPFMLLAG 634

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            ++    ++  R    T    V + +AI +++
Sbjct: 635 ARDVEANAVSFRFLDGTQVNGVPVDEAIAVIS 666


>gi|687792|gb|AAC43729.1| putative threonyl-tRNA synthetase; similar to E. coli threonyl-tRNA
           synthetase SwissProt Accession Number P00955
           [Haemophilus influenzae]
 gi|1587744|prf||2207242E ORF 4
          Length = 443

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 212/442 (47%), Positives = 306/442 (69%), Gaps = 10/442 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS + F    +  +VA+ I   LAK  +A  +NG+  D    + ++ ++EIIT +
Sbjct: 4   ITLPDGSQRQFDRPVSVLEVAQDIGAGLAKATIAGRVNGERRDACYVIEQDATLEIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ ++P+V++AIGP IE+GFYYD D ++  + +++  IEK+
Sbjct: 64  DEDGLEIIRHSCAHLLGHAIKQLFPDVKMAIGPTIENGFYYDVDLDRSLTQEDIDAIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K+ ++ ++AR+ FE + E YK+ IL E+I       LY   E+ D+CR
Sbjct: 124 MLELAKTNYDVVKKRVTWQEARDTFEKRGEPYKMAILDENIERTATPALYHHLEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +  +  + FKL KVAGAYWRGDS   ML RIYGTAW  +++L +YL  LEE+ KR
Sbjct: 184 GPHVPNM-RFCQHFKLQKVAGAYWRGDSKNKMLQRIYGTAWADKKQLAEYLTRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ + +DL+H+ E+  G++FWH  GW IF+ L +++R K+K  DY+E+  P ++D+ 
Sbjct: 243 DHRKIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW +Y   MF  +  +      R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWQNYADLMFTTQSEN------REYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+ +E      ++  IY  FGF  I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQIESEVTSCIKMVYDIYSTFGFTNI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAE 445
            VKLSTRPE R+GSD +WD AE
Sbjct: 417 AVKLSTRPENRIGSDEMWDRAE 438


>gi|308183917|ref|YP_003928050.1| threonyl-tRNA synthetase [Helicobacter pylori SJM180]
 gi|308059837|gb|ADO01733.1| threonyl-tRNA synthetase [Helicobacter pylori SJM180]
          Length = 612

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 240/603 (39%), Positives = 361/603 (59%), Gaps = 37/603 (6%)

Query: 44  NGKVCDLSDPVR--EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE 101
           + KV  LSD ++  +GS  I   + P +L VIRHSCAH++A+++++++P+ +  +GP++E
Sbjct: 19  SAKVLGLSDGIKALKGSEPIFFDDSPLALEVIRHSCAHLLAQSLKALYPDAKFFVGPVVE 78

Query: 102 DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEI 161
           + FYYDF      S ++L +IE KM+E         K+ L+ E+A E F  K +  K  +
Sbjct: 79  ERFYYDFKTSSKISEEDLPKIEAKMKEFAKLKLAITKETLTREQALERF--KGDELKHAV 136

Query: 162 LESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIY 221
           +  I   +   +Y+QGE+ DLC+GPH+ +T +    FKL K+AGAY  GD N  ML RIY
Sbjct: 137 MSKISG-DIFGVYQQGEFEDLCKGPHLPNT-RFLNHFKLTKLAGAYLGGDENNEMLIRIY 194

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLI 280
           G A+ T++ L  YL+ +EE++KRDHRKL  E+ LF   ++ G+G+  W  KG +      
Sbjct: 195 GIAFATKEGLKDYLFQIEEAKKRDHRKLGVELGLFSFDDEIGAGLPLWLPKGAR------ 248

Query: 281 SYMRRKIKD---------DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
             +R++I+D          YE +  P++L   +W+ SGH+D+Y+ NM+       T  D 
Sbjct: 249 --LRKRIEDLLSKALLLRGYEPVKGPEILKSDVWKISGHYDNYKENMYF------TTIDE 300

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
           + + +KPMNC GH+ V+   L SYR+LP+R  E+G V+R+E SG LHGL+RVR FTQDDA
Sbjct: 301 QEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDA 360

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
           H+FC+ EQ+ +E   I +    I + F F   M +LSTRP K +G D +W+ A N +K  
Sbjct: 361 HIFCSFEQIQSEVSAILDFTHKIMQAFDFSYEM-ELSTRPAKSIGDDKVWEKATNALKEA 419

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
           L       + RI+  +  G GAFYGPK +  + DA+ R WQCGTIQVD NLP RF   + 
Sbjct: 420 L------KEHRIDYKIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDMNLPERFKLAFT 473

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
           N H+    PVMIHRA+ GS ERFI I+ E+F GN P +++P Q  +  I      +A ++
Sbjct: 474 NEHNHAEQPVMIHRAILGSFERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHVFALKL 533

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
              LK   + +E   +N+++N K+R    +KIP+I++ G++E     + IR     T  K
Sbjct: 534 KEELKKRDIFVEVLDKNDSLNKKVRLAEKQKIPMILVLGNEEMETEILSIRDREKQTQYK 593

Query: 632 VSL 634
           + L
Sbjct: 594 MPL 596


>gi|256376220|ref|YP_003099880.1| threonyl-tRNA synthetase [Actinosynnema mirum DSM 43827]
 gi|255920523|gb|ACU36034.1| threonyl-tRNA synthetase [Actinosynnema mirum DSM 43827]
          Length = 682

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 242/626 (38%), Positives = 365/626 (58%), Gaps = 44/626 (7%)

Query: 45  GKVCDLS-DPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG 103
           G + DLS  P  +  +E +  +     +VIRHS AH++A+AVQ  +PE ++ IGP ++DG
Sbjct: 48  GHLRDLSWTPQVDVEVEAVAADTEDGRSVIRHSTAHVLAQAVQQQFPEAKLGIGPPVKDG 107

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE 163
           FYYDF  ++PF+ ++LA +EK+M+ I+     F ++ +    A +  E   E +K+E+++
Sbjct: 108 FYYDFQVDRPFTPEDLAALEKRMKAIVKGAQRFTRRVVESTDAAKA-ELASEPFKLELVD 166

Query: 164 ---SIPAKE-------NVTLY-----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGA 206
               +   E        +T+Y     R GE  W DLCRGPH+ +T  +  F KL +VA A
Sbjct: 167 VKGGVDTAEVMEVGGGELTIYDNLDPRSGERVWGDLCRGPHLPTTKHIPAF-KLTRVAAA 225

Query: 207 YWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGV 265
           YWRG+   P L RIYGTAW +Q+ L +++  + E+E+RDHRKL  E+DLF   ++ GSG+
Sbjct: 226 YWRGNEKNPQLQRIYGTAWESQEALDKHVELIAEAERRDHRKLGVELDLFSFPDEIGSGL 285

Query: 266 IFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCA 324
             +H +G  I + +  Y R R   + YE + +P +   +L++ SGH D YR  M+     
Sbjct: 286 AVFHPRGGIIRKAMEDYSRARHEAEGYEFVYSPHITKGNLFETSGHLDWYRDGMYPAMHL 345

Query: 325 DDTIKDLRT-------FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           D  + +  T       + LKPMNCP H  +F    +SYRELP+R+ EFGSVYR E SG +
Sbjct: 346 DAELNEDGTIRRPGQDYYLKPMNCPFHDLIFRSRGRSYRELPLRMFEFGSVYRYEKSGVI 405

Query: 378 HGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR-PEKRVG 436
           HGL RVRG TQDDAH+FCT +Q+  E   +   ++ + +D+G +   ++LSTR  EK VG
Sbjct: 406 HGLTRVRGMTQDDAHIFCTLDQVQEELKSLLAFVLGLLRDYGLDDFYLELSTRNDEKYVG 465

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLL----GEGAFYGPKFEYILKDAIGRDWQ 492
           SD LW+ A        +T++ +++D   +G+ L    G  AFYGPK     KDA+GR WQ
Sbjct: 466 SDELWETA-------TETLRVAAED---SGLELVPDPGGAAFYGPKISVQAKDALGRTWQ 515

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
             TIQ+DFNLP RF   Y      +  PVMIHRA+FGSIERF G++ E++ G  P WL+P
Sbjct: 516 MSTIQLDFNLPERFELEYTGPDGSRQRPVMIHRALFGSIERFFGVLTEHYAGAFPAWLAP 575

Query: 553 IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
           +Q +   I     ++   +A  LK H + +E D  ++ +  KIR H+ +K+P +++ G K
Sbjct: 576 VQVVGIPIADEHADHLFAVAKELKKHGVRVEIDASDDRMQKKIRNHTTQKVPFMLLAGGK 635

Query: 613 EASERSIGIRRFGSTTTQKVSLLDAI 638
           +    ++  R    T    V +  A+
Sbjct: 636 DVESGAVSFRFRDGTQINGVPVEQAV 661


>gi|260802092|ref|XP_002595927.1| hypothetical protein BRAFLDRAFT_268618 [Branchiostoma floridae]
 gi|229281179|gb|EEN51939.1| hypothetical protein BRAFLDRAFT_268618 [Branchiostoma floridae]
          Length = 681

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 258/646 (39%), Positives = 371/646 (57%), Gaps = 29/646 (4%)

Query: 2   PSDIKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           P+ IK+T PDG  +       T  D+A SIS+ LA   +   +NG V DL  P   + S+
Sbjct: 35  PTPIKVTLPDGKQLDGQAWRTTPLDIATSISKGLADNTIVSKVNGVVWDLDRPFEGDASV 94

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDE 118
           E +  +D  + AV  HS AHI+ EA++  +    +  GP IEDGFYYD   E +  SS++
Sbjct: 95  EFLKFDDEEAKAVYWHSSAHIIGEAMERHYGGC-LCYGPPIEDGFYYDMYLEGRQVSSND 153

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
              +E   + I+    PF++  +  E   ++F   K  +KV ILE        T+YR G 
Sbjct: 154 FPALETVTKSILKEKQPFVRLEMKKEDLLKMFAYNK--FKVRILEQKVTTPTTTVYRCGP 211

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLCRGPHVR TG++K    + K +  YW G ++   L R+YG ++   + L ++  F 
Sbjct: 212 LIDLCRGPHVRHTGKIKAL-HVHKNSSTYWEGKADMESLQRVYGISFPDNKMLKEWKEFQ 270

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
           E++++RDHRK+ RE +LF   E   G  F+  KG  I+  LI Y++ +  K  ++E+ +P
Sbjct: 271 EQAKERDHRKIGREQELFFFHELSPGSCFFLPKGAHIYNKLIDYIKEEYHKRGFQEVVSP 330

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  LW+ SGHWD Y  NMF+ +   +T      FALKPMNCPGH  +++   +S+RE
Sbjct: 331 NMYNVKLWKTSGHWDHYEENMFSFEVEKET------FALKPMNCPGHCLMYDVRPRSWRE 384

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE---CLKIHNLIISI 414
           LP+R+A+FG ++RNE SG+L GL RVR F QDDAH+FCT EQ+ +E   CL+  N   SI
Sbjct: 385 LPLRMADFGVLHRNELSGTLTGLTRVRRFQQDDAHIFCTMEQLEDEIEGCLEFMN---SI 441

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           Y  FGF+ + + LSTRPEK +G    WD AE  +   LD  K     ++N     G+GAF
Sbjct: 442 YTTFGFD-LKLFLSTRPEKAIGDKETWDRAEKHLASALD--KFGMPWKLNP----GDGAF 494

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIER 533
           YGPK +  + DA+ R  QC TIQ+DFN P RFN  YV+    EK  PVMIHRA+ GS+ER
Sbjct: 495 YGPKIDIQVFDALRRAHQCATIQLDFNNPERFNLTYVSGDGDEKKRPVMIHRAILGSVER 554

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETIN 592
           FI I+ ENF G  P WLSP QA++  ++    EYAQ++ N +       E D    +T+N
Sbjct: 555 FIAILCENFGGKWPFWLSPRQAMIVPVSPDQNEYAQKVRNSIHEAGFMCEADCDPGDTMN 614

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
            KIR   + +   I++ G KE    ++ +R   +    + S+ D I
Sbjct: 615 KKIRNAQLAQYNFIMVVGKKEVESGTVNVRTRDNKVHGERSVEDVI 660


>gi|298250750|ref|ZP_06974554.1| threonyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
 gi|297548754|gb|EFH82621.1| threonyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
          Length = 624

 Score =  451 bits (1159), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 239/625 (38%), Positives = 364/625 (58%), Gaps = 61/625 (9%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQ 127
           + L  +RHS AH+MA AVQ +WPE +  +GP I++GFYYD +  +  +  +L +IE+KM+
Sbjct: 14  QDLDRMRHSTAHLMAAAVQLLWPEAKFGVGPAIKNGFYYDIELPEALTPKDLGRIEQKMR 73

Query: 128 EIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL------------------ESIPAKE 169
           E+  +   + +  +  ++A E    + + YKVE+L                  E+I   E
Sbjct: 74  ELKNKKLGYDRIEVGIDEAIEEMSKRNQPYKVELLNLLKERGSTAVVQETGDAEAIGLSE 133

Query: 170 N------VTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
                  V+ Y+ G + DLCRGPHV  T  +   FKLM +AGAYWRG+ N P L R+YGT
Sbjct: 134 GQEGSTVVSFYQTGHFLDLCRGPHVEDTTHIG-VFKLMSIAGAYWRGNENNPQLQRLYGT 192

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISY 282
           A+NT++EL  YL+ LEES+KRDHR+L +E+DLF  ++  G G+  +  KG  + + L+  
Sbjct: 193 AFNTKEELDHYLWLLEESKKRDHRRLGQELDLFAFSDLVGGGLPLFTPKG-TLVRDLLEE 251

Query: 283 MRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAV--KCADDTIKDLRTFALKP 338
             + +++   Y+ ++ P +    L++ SGHW+ ++ ++F V  K  +D       F +KP
Sbjct: 252 FVQSLQEPLGYQRVHIPHITKNDLYKTSGHWEKFQEDIFHVSGKSGED-------FCMKP 304

Query: 339 MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE 398
           MNCP H  ++   ++SYRELP+RL+E  +VYR+E  G+LHGL RVR  TQDDAHVFCT +
Sbjct: 305 MNCPHHTQIYASRMRSYRELPIRLSEVTTVYRDELPGTLHGLSRVRAITQDDAHVFCTPD 364

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLST----RPEKRVGSDALWDDAENIMKGVLDT 454
           Q+  E L+I+++I + YK FG   + V+LS      PEK +G+  LW+ A+  ++ VL  
Sbjct: 365 QVQEEVLRIYSIIENFYKPFGM-TLAVRLSLWDEEHPEKYLGTPELWNSAQEQLRAVL-- 421

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH 514
                   I     +GE AFYGPK ++   DA+ R WQ  TIQ+DFNLP RFN  Y+   
Sbjct: 422 ----RMKGIEWVEEVGEAAFYGPKIDFTALDALERTWQLATIQLDFNLPERFNLEYMGPD 477

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANL 574
                PVM+HRAV GS+ERF+ ++IE++ G  P WLSP+QA++  I    ++YA ++   
Sbjct: 478 GHAARPVMLHRAVLGSVERFMSVLIEHYAGAFPTWLSPVQAMIIPIADRHLDYAYQVKQS 537

Query: 575 LKSHHLS-------IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR----- 622
           L    LS       +E D   E++  KIR   ++K+P +++ GDKEA    + +R     
Sbjct: 538 LLDVRLSSARESIRVEVDEARESMQKKIRNAQLQKVPYMLVLGDKEAENGEVNVRHRSGV 597

Query: 623 RFGSTTTQKVSLLDAIPILTKESLP 647
             G+ +   ++      ILT+  LP
Sbjct: 598 NLGTLSVSALAERIKQEILTRNDLP 622


>gi|119025818|ref|YP_909663.1| threonyl-tRNA synthetase [Bifidobacterium adolescentis ATCC 15703]
 gi|118765402|dbj|BAF39581.1| threonyl-tRNA synthetase [Bifidobacterium adolescentis ATCC 15703]
          Length = 711

 Score =  451 bits (1159), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 249/633 (39%), Positives = 361/633 (57%), Gaps = 43/633 (6%)

Query: 36  KKAVAVAINGKVCDLSDPVREGSI-EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           K  +AV +NG+  DL   + +G + E I  +    +A++RHS  H+MA+AVQ I P+ ++
Sbjct: 65  KNIIAVRLNGEPRDLYTELHDGDVVEPIALDSEDGVAIMRHSATHVMAQAVQEIRPDAKL 124

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKAR------- 147
            +GP+I+DGFYYDFD E PF+ ++L +IEK+MQ II     F ++ ++ E+A        
Sbjct: 125 GVGPVIKDGFYYDFDVETPFTPEDLKEIEKRMQRIIKSSQSFRRRVVTEEEALAEEADQP 184

Query: 148 ---ELFESKKEAYKVEILESIPAKENVTLY----RQGE--WFDLCRGPHVRSTGQVKKFF 198
              EL + K+     E    I  KE ++ Y    R+G   W DLCRGPH+ +T  +K F 
Sbjct: 185 YKLELIKDKEAHLDPEAATEISGKE-LSFYDNVDREGNVVWKDLCRGPHLPNTRYIKAF- 242

Query: 199 KLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI 258
           K+ + A AYWRG    PML RIYG A+ T+++L  Y   LEE+ KRDHRKL  EMDLF  
Sbjct: 243 KIERSAAAYWRGSEANPMLQRIYGAAFATKEDLKAYQTRLEEAAKRDHRKLGAEMDLFSF 302

Query: 259 AED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
            ++ G G+  +H KG  +   +  Y R    K  Y  + TP +    L++ SGH   Y+ 
Sbjct: 303 PDEIGPGLAVFHPKGAAVINAMEDYSREMHRKHHYSFVQTPHITKGGLYETSGHLQWYKD 362

Query: 317 NMFAVKCAD-------DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVY 369
           +M+     D       + IK    + LKPMNCP H  +F    +SYRELP+RL EFG+VY
Sbjct: 363 SMYPPMRLDEEKDENGNVIKQGFDYYLKPMNCPMHNLIFKSRQRSYRELPLRLFEFGTVY 422

Query: 370 RNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
           R E SG +HGL RVRG TQDD+H++CT+EQM +E   +   ++ + KDFG +   ++LST
Sbjct: 423 RYEKSGEVHGLTRVRGLTQDDSHIYCTREQMKDELKSLLTFVLGLLKDFGLDDFYLELST 482

Query: 430 R-PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIG 488
           + P K VGSD +W++A N +  V    K S  D ++        AFYGPK     +DAIG
Sbjct: 483 KDPHKYVGSDEIWEEATNTLAEV---AKESGLDLVDDPC---GAAFYGPKISVQARDAIG 536

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPL 548
           R WQ  TIQ+DFNLP RF   Y+ +      PVMIHRA+FGSIERF  +++E++ G  P 
Sbjct: 537 RTWQVSTIQLDFNLPERFKLEYIAADGTHQRPVMIHRALFGSIERFFAVLLEHYAGAFPA 596

Query: 549 WLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIII 608
           WL+P+Q +   +      + Q+    L+   +  E D  ++    KIR  S  K P I+I
Sbjct: 597 WLAPVQVLGVPVADEFAPHLQKFIASLEEETVRCEIDLSDDRFGKKIRNASKSKAPFILI 656

Query: 609 CGDKEASERSIGIR-RFGSTTTQKVSLLDAIPI 640
            G+++ +  ++  R R GS        L+ +P+
Sbjct: 657 VGEEDMNNNAVSFRFRDGSQ-------LNGVPV 682


>gi|260888481|ref|ZP_05899744.1| threonine--tRNA ligase [Selenomonas sputigena ATCC 35185]
 gi|330838210|ref|YP_004412790.1| threonyl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
 gi|260861678|gb|EEX76178.1| threonine--tRNA ligase [Selenomonas sputigena ATCC 35185]
 gi|329745974|gb|AEB99330.1| threonyl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
          Length = 593

 Score =  451 bits (1159), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 229/573 (39%), Positives = 348/573 (60%), Gaps = 11/573 (1%)

Query: 70  LAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQE 128
           L V RHS AH++A+AV  ++  E Q AIGP I DGFYYDF   +  ++D+L  IE+KM+E
Sbjct: 7   LHVYRHSLAHVLAKAVIEVFGKETQYAIGPEIADGFYYDFLLPRAATNDDLKTIEEKMKE 66

Query: 129 IIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF-DLCRGPH 187
           I+ R   + ++ +S + A ELF+++K  +KVE++E +P  E +T YR G+ F DLCRGPH
Sbjct: 67  ILKRKEDWKREEISKKDALELFKNQK--FKVELIEDLPDDEILTTYRTGDDFVDLCRGPH 124

Query: 188 VRSTGQVKKF-FKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDH 246
           V ++  +    ++L  ++G+YWRGD  R  L+RIY  A+ T++EL  +L F++++++RDH
Sbjct: 125 VENSAALLSVAWQLRSMSGSYWRGDEKRDQLTRIYAYAFPTKEELKAHLAFIKDAQERDH 184

Query: 247 RKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLW 305
           +K+  ++DLF   E   G+ +W  +GWK+F  L+ + R       Y+E++ P + ++ LW
Sbjct: 185 KKIGPQLDLFMFDETAPGMPYWLPRGWKLFNALLEFWRGIHEAHGYQEVSAPVINNKRLW 244

Query: 306 QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEF 365
             SGHW  Y+ NMF +  AD  I+   TFA+KPMNCP  + ++    +SYR+LP+R    
Sbjct: 245 VTSGHWAHYKENMFLIPGADGDIEADDTFAIKPMNCPNAIKIYQRKTRSYRDLPIRYNTV 304

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
             ++R E SG L+GL RV+ F QDD H F  ++Q+  E   I ++   IY   G      
Sbjct: 305 DVIHRKEKSGELNGLFRVQLFRQDDDHTFLMEDQIAAEMGDIMDIADEIYSTLGM-SCKA 363

Query: 426 KLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKD 485
           +LSTRP+  +G    W+ AE  +K +LD         +N G    +GAFYGPK +  +KD
Sbjct: 364 ELSTRPDDFMGDIETWNVAEKELKAILDRKYGEGNYEVNEG----DGAFYGPKIDLKMKD 419

Query: 486 AIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           A+GR+WQ GT+Q+DF LP  F+  Y+        PV++HRA+FGS+ERFIG++IENFKG 
Sbjct: 420 ALGREWQVGTLQLDFQLPQNFDLKYIAKDGSHKQPVVLHRAIFGSMERFIGVLIENFKGA 479

Query: 546 LPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPI 605
            P WLSP+Q  +  I     +YA+++A  L    +  E D+ ++ +  KI+     K P 
Sbjct: 480 FPFWLSPVQVGIVPIRPEHNDYAKKVAQKLFKSRVRFEVDYADKNMREKIKGFKHYKDPY 539

Query: 606 IIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           I++ GDKEA E ++ I   G+    K   LD  
Sbjct: 540 ILVLGDKEAEENTVSINVRGTNEQLKDVPLDTF 572


>gi|317179928|dbj|BAJ57714.1| threonyl-tRNA synthetase [Helicobacter pylori F32]
          Length = 612

 Score =  451 bits (1159), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 236/591 (39%), Positives = 356/591 (60%), Gaps = 37/591 (6%)

Query: 44  NGKVCDLSDPVR--EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE 101
           + KV  LSD ++   G+  I   + P +L VIRHSCAH++A+++++++P+ +  +GP++E
Sbjct: 19  SAKVLGLSDGIKALNGTEPIYFDDSPLALEVIRHSCAHLLAQSLKALYPDAKFFVGPVVE 78

Query: 102 DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEI 161
           +GFYYDF      S ++L +IE KM+E         K+ L+ E+A E F  K +  K  +
Sbjct: 79  EGFYYDFKTASKISEEDLPKIEAKMKEFAKLKLAITKEVLTREQALERF--KGDELKHAV 136

Query: 162 LESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIY 221
           +  I   +   +Y+QGE+ DLC+GPH+ +T +    FKL K+AGAY  GD N  ML RIY
Sbjct: 137 MSKISG-DKFGVYQQGEFEDLCKGPHLPNT-RFLNHFKLTKLAGAYLGGDENNEMLIRIY 194

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLI 280
           G A+ T++ L  YL+ +EE++KRDHRKL  E+ LF   ++ G+G+  W  KG +      
Sbjct: 195 GIAFATKEGLKDYLFQIEEAKKRDHRKLGVELGLFSFDDEIGAGLPLWLPKGAR------ 248

Query: 281 SYMRRKIKD---------DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
             +R++I+D          YE +  P++L   +W+ SGH+D+Y+ NM+       T  D 
Sbjct: 249 --LRKRIEDLLSKALLLRGYEPVKGPEILKSDVWKISGHYDNYKENMYF------TTIDE 300

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
           + + +KPMNC GH+ V+   L SYR+LP+R  E+G V+R+E SG LHGL+RVR FTQDDA
Sbjct: 301 QEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDA 360

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
           H+FC+ EQ+ +E   I +    I + F F   M +LSTRP K +G D +W+ A N +K  
Sbjct: 361 HIFCSFEQIQSEVSAILDFTHKIMQAFDFNYEM-ELSTRPAKSIGDDKVWEKATNALKEA 419

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
           L       + RI+  +  G GAFYGPK +  + DA+ R WQCGTIQVD NLP RF   + 
Sbjct: 420 L------KEHRIDYKIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDMNLPERFKLAFT 473

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
           N  +    PVMIHRA+ GS ERFI I+ E+F GN P +++P Q  +  I      +A ++
Sbjct: 474 NERNHAEQPVMIHRAILGSFERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHVFALKL 533

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
              LK   + +E   +N+++N K+R    +KIP+I++ G++E     + IR
Sbjct: 534 KEALKKRDIFVEVLDKNDSLNKKVRLAEKQKIPMILVLGNEEVESEILSIR 584


>gi|224541524|ref|ZP_03682063.1| hypothetical protein CATMIT_00694 [Catenibacterium mitsuokai DSM
           15897]
 gi|224525561|gb|EEF94666.1| hypothetical protein CATMIT_00694 [Catenibacterium mitsuokai DSM
           15897]
          Length = 585

 Score =  451 bits (1159), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 229/585 (39%), Positives = 357/585 (61%), Gaps = 23/585 (3%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQIEKKM 126
           + L  + HSCAH++A+AV+ ++P+ +  +GP++E+GFYYD D  +Q  S D+L +IEK+M
Sbjct: 8   KDLNTLNHSCAHVLAQAVKHLYPQAKFWVGPVVEEGFYYDIDLGDQTISDDDLPKIEKEM 67

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGP 186
           ++I       ++  +S E+A E F  K + YK++++  +     +T Y QG++ DLCRGP
Sbjct: 68  KKICKDGKRIVRHEVSKEEALEEF--KDDEYKLDLINGLEDG-TITTYSQGDFTDLCRGP 124

Query: 187 HVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDH 246
           HV  T ++ K FKL+K +GAYW+GD N  +L RIYG  + T++EL  +L  LEE+++RDH
Sbjct: 125 HV-ETVKLCKNFKLIKHSGAYWKGDKNNKVLQRIYGVCFPTKEELEAHLQLLEEAKERDH 183

Query: 247 RKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQVLDQHL 304
           RKL +E+ +F  A+  G G+  W   G+ + + L  Y M ++++  YE + TP + +  L
Sbjct: 184 RKLGKELGIFMFADIVGKGLPMWLPNGFTVRRLLSDYIMNKELELGYEHVMTPSLGNVKL 243

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           +++SGHW  Y+ +MF     DD       + L+PMNCP H+ ++   L SYR+LPVR+AE
Sbjct: 244 YKKSGHWAHYKDDMFPAMELDD-----EAYVLRPMNCPHHMVMYKSTLHSYRDLPVRIAE 298

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
             + +R E SG+L G+ R R FTQ+D+H+FC  +Q+  E   + +LI+ +YKDFGF+   
Sbjct: 299 IANDFRFEASGALTGIERARAFTQNDSHIFCRPDQIAQEFKNVAHLILDVYKDFGFKDYS 358

Query: 425 VKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
            +LS R     EK  G+D LW+ +EN ++ VL  +       +      GE AFYGPK +
Sbjct: 359 FRLSLRDKNNKEKYFGNDELWEKSENELREVLKEMD------VEFYEAEGEAAFYGPKLD 412

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
             +K A+G D    TIQ+D+ LP RF   YV+ + +K  PV+IHRA+ GS++RFI  ++E
Sbjct: 413 VQVKSALGHDVTLSTIQLDYQLPERFELTYVDENGDKVRPVVIHRAILGSLDRFIAFLLE 472

Query: 541 NFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
             KGNLPLWL+P Q  V  +      EYA+E+   L+  H  +  D R+E + Y+IRE  
Sbjct: 473 ETKGNLPLWLAPTQVQVIPVKLEYHDEYAKEVVAKLRKAHFRVNNDNRDEKLGYRIREAQ 532

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +KKIP  ++ GD E    ++  R+ G      V+  + + +L  E
Sbjct: 533 LKKIPYQLVLGDNERDNGTVTYRKHGEKKQTTVTFDEFVELLNTE 577


>gi|229828744|ref|ZP_04454813.1| hypothetical protein GCWU000342_00810 [Shuttleworthia satelles DSM
           14600]
 gi|229793338|gb|EEP29452.1| hypothetical protein GCWU000342_00810 [Shuttleworthia satelles DSM
           14600]
          Length = 597

 Score =  451 bits (1159), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 225/556 (40%), Positives = 339/556 (60%), Gaps = 13/556 (2%)

Query: 70  LAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQE 128
           L V RHS AHI+A+AV  ++ PE Q AIGP I+ GFYYDF      + D+  +IE KM+E
Sbjct: 7   LQVYRHSLAHILAKAVIELYGPETQYAIGPQIDTGFYYDFKLPASITEDDFPKIEAKMKE 66

Query: 129 IIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF-DLCRGPH 187
           I+ R   F+++ ++ ++A E+F  +K  YK EI++ +P    +T+Y+ G+ F DLCRGPH
Sbjct: 67  ILKRKEDFIREEVTRDQALEIFRDQK--YKTEIIKDLPEDAVITVYKTGDDFTDLCRGPH 124

Query: 188 VRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDH 246
           V +  ++    F +   +GAYWRGD     L RIY  A+ +++EL ++   L E+++RDH
Sbjct: 125 VDNAKELMSAAFAIRSTSGAYWRGDEKNDTLQRIYVDAFPSKEELKEHQRLLREAKERDH 184

Query: 247 RKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLW 305
           +KL   ++LF   E   G+ +W  +GWK+F  L+ Y R    + +Y EI  P + +Q LW
Sbjct: 185 KKLGPALELFMFHESAPGMPYWLPRGWKLFNALLDYWRSVHERHNYLEIAAPVINNQKLW 244

Query: 306 QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEF 365
             SGHW  Y+ NMF +    +   D   +A KPMNCP  +  + +GL+SYR+LP R+++ 
Sbjct: 245 ATSGHWGHYKENMFIIPGEKEDESDY--YAAKPMNCPNAIMFYKNGLRSYRDLPFRVSQV 302

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
             ++R E SG L+GL RV+ F QDDAH+  T++Q+ +E   I ++   IY  FG      
Sbjct: 303 DVIHRKEKSGELNGLFRVQMFRQDDAHILVTEDQIASEIADIMSIADEIYSTFGL-SFRA 361

Query: 426 KLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKD 485
           +LSTRP+  +G  A WD AE  ++ +LD +       +N G    +GAFYGPK +  +KD
Sbjct: 362 ELSTRPDDFMGDIATWDKAEAELREILDNMYGEGNYDVNEG----DGAFYGPKIDLQMKD 417

Query: 486 AIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           A+GR+WQ GTIQ+DF LP  F   Y      +  PV+IHRA+FGS+ERFIGI+IENFKG+
Sbjct: 418 ALGREWQMGTIQLDFQLPLNFGLKYAAQDGSEKQPVLIHRAIFGSMERFIGILIENFKGS 477

Query: 546 LPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPI 605
            P W+SP Q  +  I +S   YA++I   L+S  + +E D+ ++ +N KI+     + P 
Sbjct: 478 FPFWVSPYQVGIVPIRTSHNAYAEKIQEELRSMGIRVEADYADKNMNEKIKRFRTLRDPY 537

Query: 606 IIICGDKEASERSIGI 621
            ++ GDKE    ++ +
Sbjct: 538 TLVIGDKEVENGTVSV 553


>gi|15644753|ref|NP_206923.1| threonyl-tRNA synthetase [Helicobacter pylori 26695]
 gi|2501057|sp|P56071|SYT_HELPY RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|2313207|gb|AAD07192.1| threonyl-tRNA synthetase (thrS) [Helicobacter pylori 26695]
          Length = 612

 Score =  450 bits (1158), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 236/591 (39%), Positives = 357/591 (60%), Gaps = 37/591 (6%)

Query: 44  NGKVCDLSDPVR--EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE 101
           + KV  LSD ++   G+  I   + P +L VIRHSCAH++A+++++++P+ +  +GP++E
Sbjct: 19  SAKVLGLSDGIKALNGTEPIYFDDSPLALEVIRHSCAHLLAQSLKALYPDAKFFVGPVVE 78

Query: 102 DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEI 161
           +GFYYDF      S ++L +IE KM+E         K+ L+ E+A E F  K +  K  +
Sbjct: 79  EGFYYDFKTSSKISEEDLPKIEAKMKEFAKLKLAITKETLTREQALERF--KGDELKHAV 136

Query: 162 LESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIY 221
           +  I   +   +Y+QGE+ DLC+GPH+ +T +    FKL K+AGAY  GD N  ML RIY
Sbjct: 137 MSKI-GGDAFGVYQQGEFEDLCKGPHLPNT-RFLNHFKLTKLAGAYLGGDENNEMLIRIY 194

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLI 280
           G A+ T++ L  YL+ +EE++KRDHRKL  E+ LF   ++ G+G+  W  KG +      
Sbjct: 195 GIAFATKEGLKDYLFQIEEAKKRDHRKLGVELGLFSFDDEIGAGLPLWLPKGAR------ 248

Query: 281 SYMRRKIKD---------DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
             +R++I+D          YE +  P++L   +W+ SGH+D+Y+ NM+       T  D 
Sbjct: 249 --LRKRIEDLLSQALLLRGYEPVKGPEILKSDVWKISGHYDNYKENMYF------TTIDE 300

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
           + + +KPMNC GH+ V+   L SYR+LP+R  E+G V+R+E SG LHGL+RVR FTQDDA
Sbjct: 301 QEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDA 360

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
           H+FC+ EQ+ +E   I +    I + F F   M +LSTRP K +G D +W+ A N +K  
Sbjct: 361 HIFCSFEQIQSEVSAILDFTHKIMQAFDFSYEM-ELSTRPAKSIGDDKVWEKATNALKEA 419

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
           L       + RI+  +  G GAFYGPK +  + DA+ R WQCGTIQVD NLP RF   + 
Sbjct: 420 L------KEHRIDYKIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDMNLPERFKLAFT 473

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
           N ++    PVMIHRA+ GS ERFI I+ E+F GN P +++P Q  +  I      +A ++
Sbjct: 474 NEYNHAEQPVMIHRAILGSFERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHVFALKL 533

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
              LK   + +E   +N+++N K+R    +KIP+I++ G++E     + IR
Sbjct: 534 KEALKKRDIFVEVLDKNDSLNKKVRLAEKQKIPMILVLGNEEVETEILSIR 584


>gi|182414299|ref|YP_001819365.1| threonyl-tRNA synthetase [Opitutus terrae PB90-1]
 gi|177841513|gb|ACB75765.1| threonyl-tRNA synthetase [Opitutus terrae PB90-1]
          Length = 637

 Score =  450 bits (1158), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 236/605 (39%), Positives = 353/605 (58%), Gaps = 59/605 (9%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           L  +RHS +HI+A AV  ++P+ ++ IGP  + GFYYD D +  F++++L +IE +M++I
Sbjct: 6   LEELRHSGSHILATAVLRLFPDAKLDIGPPTDTGFYYDIDLDHKFTAEDLTRIEAEMKKI 65

Query: 130 IARDSPFLKQYLSHEKARELFESK-KEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
              + PFL++ +S ++A ++ +++ +E YK+  L  IPA E ++ Y+ GE+ DLC G HV
Sbjct: 66  ADENQPFLRKEVSRDEAVQIIKARGQERYKLGRLADIPADEKISFYQNGEFVDLCAGTHV 125

Query: 189 RSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRK 248
           R T ++K F KL+ +AGAY RGD     L RIYGTA+ T++EL QYL   E+++ RDHRK
Sbjct: 126 RYTSKLKAF-KLLTIAGAYHRGDEKNKQLQRIYGTAFPTKEELAQYLERQEQAKARDHRK 184

Query: 249 LAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQ 306
           L +++ LFHI ED G G++ W   G  I Q L +++  ++ K  Y+++ TP +    L++
Sbjct: 185 LGKDLKLFHIDEDVGQGLVLWTPNGAVIRQELQNFISEELRKQGYQQVFTPHIGKLELYK 244

Query: 307 QSGHWDSYRANMFA---------------VKCAD-------------------------- 325
            SGH+  Y+ + F+                 CA+                          
Sbjct: 245 TSGHFPYYKDSQFSPIFETDSLAKAIGENCSCAEAFARLEAVSANLAAQINARTGKESIA 304

Query: 326 -DTIKD----LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            D ++     L  F LKPMNCP H+ +F     SYR+LPVRLAEFG+VYR E SG L+G+
Sbjct: 305 PDRVRPDDQLLSGFMLKPMNCPHHIKIFASQPHSYRDLPVRLAEFGTVYRWEQSGELNGM 364

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR---PEKRVGS 437
            RVRGFTQDDAH+FCT+EQ+  E L   +L+  I    G     V++  R     K  G 
Sbjct: 365 TRVRGFTQDDAHLFCTEEQVAAEVLGCLSLVKIILSTLGMADYRVRVGLRDPDSNKYTGD 424

Query: 438 DALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ 497
            A WD AEN  +    T+     +        GE AFYGPK ++++KD IGR+WQ GT+Q
Sbjct: 425 AANWDKAENACREAAKTLGVPFTEEP------GEAAFYGPKIDFVIKDVIGREWQLGTVQ 478

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIV 557
           VD+NLP RF+  Y+ + ++   PVMIHRA FGS+ERF G++IE+F G+ P WL+P Q  +
Sbjct: 479 VDYNLPVRFDLSYIGADNQPHRPVMIHRAPFGSMERFCGVLIEHFAGDFPAWLAPEQVRL 538

Query: 558 TTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASER 617
             I+    +YA+ +   LK+ +     D  ++ +  KIR   I K+P  ++ G KEA   
Sbjct: 539 VPISDKVADYARALLGRLKAENFRATLDEHSDKLGAKIRRAEIDKVPYTLVIGQKEAEAN 598

Query: 618 SIGIR 622
           S+ +R
Sbjct: 599 SVSVR 603


>gi|146420108|ref|XP_001486012.1| hypothetical protein PGUG_01683 [Meyerozyma guilliermondii ATCC
           6260]
 gi|146389427|gb|EDK37585.1| hypothetical protein PGUG_01683 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 719

 Score =  450 bits (1157), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 249/657 (37%), Positives = 373/657 (56%), Gaps = 37/657 (5%)

Query: 4   DIKLTFPDGSIKNFPVHATGS-DVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           DIK+T  DGS++    + T    +A  I +S +++ V   +NG + DL  P+ +  S+E 
Sbjct: 71  DIKITLKDGSVRVGTAYETTPLSIAIDIGKSFSERQVISKVNGTLWDLERPLEDDVSLEF 130

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD--FDK-EQPFSSDE 118
           +  + P   AV  HS AH++ E+ +     + +  GP  EDGF+YD  FD  E+  +  +
Sbjct: 131 LDFDHPEGKAVFWHSSAHVLGESCECHLGGL-ICYGPPTEDGFFYDVSFDNGERVITQGD 189

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQG 177
              +EK   + I     F++  ++ E+  E+F+  K  YKV+ + + IP   + T+YR G
Sbjct: 190 FGNLEKVSTKAIKEKQKFVRLEMTKEQLLEMFKYNK--YKVKFISDKIPDGTSSTVYRCG 247

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
              DLC GPH+  TG++K F KL+K + +Y+ GD+N   L RIYG ++  ++ + ++L F
Sbjct: 248 PLIDLCLGPHIPHTGKIKSF-KLLKNSSSYFLGDANNDSLQRIYGISFPDKKLMDEHLKF 306

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINT 296
           L+E+  RDHRK+ RE +LF   E   G  FW   G +I+  L+  MR + I+ D++E+ T
Sbjct: 307 LKEAADRDHRKIGREQELFFFNEMSPGSAFWLPHGTRIYNRLVDLMRSEYIQRDFQEVIT 366

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P + +  LW+ SGHW +Y+ NMF      D+      F LKPMNCPGH  +F    +SYR
Sbjct: 367 PNMYNSKLWETSGHWGNYKENMFTFDVEKDS------FGLKPMNCPGHCLIFKSRERSYR 420

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ELP R+A+FG ++RNE SG+L GL RVR F QDDAH+FCT+EQ+ +E     + +  +Y 
Sbjct: 421 ELPWRVADFGVIHRNEFSGALSGLTRVRRFQQDDAHIFCTEEQIEDEIAGCFDFLQKVYG 480

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
            FGFE   ++LSTRPEK VG    W++AE  ++  L+      +  +N G    +GAFYG
Sbjct: 481 IFGFE-FKMELSTRPEKYVGELETWNNAEAKLESALNKFLGEGKWELNPG----DGAFYG 535

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK + ++ DA+ R +QC TIQ+DF LP+RF   +    S    PVMIHRA+ GS+ER   
Sbjct: 536 PKIDIMISDALKRSFQCATIQLDFQLPNRFELEFKAETSSHARPVMIHRAILGSVERMAA 595

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIAN-LLKSHHLSIETDFRNETINYKI 595
           I+ E+FKG  P WLSP Q +V  +     +YAQ I   L K H    + D    T+  K+
Sbjct: 596 ILTEHFKGRWPFWLSPRQILVVPVGVKYNDYAQSIQQKLSKDHAFYADVDLSGNTLQKKV 655

Query: 596 REHSIKKIPIIIICGDKEASERSIGIR--------------RFGSTTTQKVSLLDAI 638
           R   + +   I I G++E +E+S+ IR              +FG    Q  SL D +
Sbjct: 656 RSGQLLQYNFIFIVGEQEQAEQSVNIRNRDIQSEQGKNETVKFGDVVKQLKSLRDEL 712


>gi|110802298|ref|YP_699583.1| threonyl-tRNA synthetase [Clostridium perfringens SM101]
 gi|123047184|sp|Q0SQM4|SYT_CLOPS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|110682799|gb|ABG86169.1| threonine--tRNA ligase [Clostridium perfringens SM101]
          Length = 643

 Score =  450 bits (1157), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 244/631 (38%), Positives = 374/631 (59%), Gaps = 30/631 (4%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+T  DGSIK      +  ++A+SIS+ LA+ A    +NGKV DL   V E  S+EI T
Sbjct: 2   IKITLKDGSIKEVEAGLSIFEIAQSISQGLARNACCGILNGKVEDLRFIVNEDSSLEICT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +         H+ +H++A AV+ ++P+ ++AIGP I++GFYYDFD E+ FS+D+L ++E
Sbjct: 62  FDSKEGQHAFNHTASHVLAAAVKRLFPQDKLAIGPSIDNGFYYDFDTEKSFSADQLNKLE 121

Query: 124 KKMQEIIARDSPFLKQY-LSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           ++M++II +++P +K++ L   +A EL   K E YKVE++  +P  E ++ Y+ G++ DL
Sbjct: 122 EEMKKII-KENPEIKRFELPRNEALELM--KDEPYKVELINDLPEGEVISFYQIGDFVDL 178

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPH+ +   +K   KL++  GAYW+GD    MLSR+YGTA+  + EL  YL  LEE++
Sbjct: 179 CAGPHLMAVKPIKAV-KLLRSTGAYWKGDEKNKMLSRVYGTAFPKKSELDAYLEALEEAK 237

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKDD-----YEEINT 296
           KRDH KL RE+ +F   E+ G G+     KG +I QTL    +R I+D+     Y    T
Sbjct: 238 KRDHNKLGRELGIFTTDENVGQGLPLLMPKGARIIQTL----QRWIEDEEQRRGYVLTKT 293

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +    L++ SGHWD Y+  MF +    D  KD   FAL+PM CP   A++N    SYR
Sbjct: 294 PLMAKSDLYKISGHWDHYKDGMFVL---GDEEKDSEVFALRPMTCPFQYAIYNSTQHSYR 350

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +LPVR AE  +++RNE SG +HGL+RVR FT  D H+ CT EQ+ +E     +L+  + +
Sbjct: 351 DLPVRFAETSTLFRNESSGEMHGLIRVRQFTLADGHIVCTPEQLEDEFKNTVDLVKYVME 410

Query: 417 DFGF-EKIMVKLS----TRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
             G  + I  + S       EK +     W++ +NIM+ +L+ +       I+      E
Sbjct: 411 TLGIADDITYRFSKWDPNNTEKYINDPEAWENTQNIMREILNHLN------IDFTEADDE 464

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
            AFYGPK +   K+  G++    TIQ+DF L  RF  +Y++   EK  P +IHR+  G  
Sbjct: 465 AAFYGPKLDIQFKNVHGKEDTIITIQIDFALAERFGMYYIDKDGEKKRPYIIHRSSIGCY 524

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           ER + ++IE + G LP W++P+QA V  ++    +YA E+   L+   + +E D R E I
Sbjct: 525 ERTLAMLIEKYAGALPTWIAPVQAKVLPLSDKYADYANEVVEELRRRGVRVEADHRAEKI 584

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIR 622
            YKIRE  +++ P I++ G+KEA  + + +R
Sbjct: 585 GYKIREARLERTPYILVVGEKEAENKEVSVR 615


>gi|217034632|ref|ZP_03440039.1| hypothetical protein HP9810_881g25 [Helicobacter pylori 98-10]
 gi|216942927|gb|EEC22414.1| hypothetical protein HP9810_881g25 [Helicobacter pylori 98-10]
          Length = 612

 Score =  450 bits (1157), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 237/603 (39%), Positives = 359/603 (59%), Gaps = 37/603 (6%)

Query: 44  NGKVCDLSDPVR--EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE 101
           + K   LSD ++   G+  I   + P +L VIRHSCAH++A+++++++P+ +  +GP++E
Sbjct: 19  SAKALGLSDGIKALNGTEPIYFDDSPLALEVIRHSCAHLLAQSLKALYPDAKFFVGPVVE 78

Query: 102 DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEI 161
           +GFYYDF      S ++L +IE KM+E         K+ L+ E+A E F  K +  K  +
Sbjct: 79  EGFYYDFKTASKISEEDLPKIEAKMKEFAKLKLAITKEVLTREQALERF--KGDELKHAV 136

Query: 162 LESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIY 221
           +  I   +   +Y+QGE+ DLC+GPH+ +T +    FKL K+AGAY  GD N  ML RIY
Sbjct: 137 MSKISG-DKFGVYQQGEFEDLCKGPHLPNT-RFLNHFKLTKLAGAYLGGDENNEMLIRIY 194

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLI 280
           G A+ T++ L  YL+ +EE++KRDHRKL  E+ LF   ++ G+G+  W  KG +      
Sbjct: 195 GIAFATKEGLKDYLFQIEEAKKRDHRKLGVELGLFSFDDEIGAGLPLWLPKGAR------ 248

Query: 281 SYMRRKIKD---------DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
             +R++I+D          YE +  P++L   +W+ SGH+D+Y+ NM+       T  D 
Sbjct: 249 --LRKRIEDLLSKALLLRGYEPVKGPEILKSDVWKISGHYDNYKENMYF------TTIDE 300

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
           + + +KPMNC GH+ V+   L SYR+LP+R  E+G V+R+E SG LHGL+RVR FTQDDA
Sbjct: 301 QEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDA 360

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
           H+FC+ EQ+ +E   I +    I + F F   M +LSTRP K +G D +W+ A + +K  
Sbjct: 361 HIFCSFEQIQSEVSAILDFTHKIMQAFDFSYEM-ELSTRPAKSIGDDKVWEKATSALKEA 419

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
           L       + RI+  +  G GAFYGPK +  + DA+ R WQCGTIQVD NLP RF   + 
Sbjct: 420 L------KEHRIDYKIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDMNLPERFKLAFT 473

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
           N H+    PVMIHRA+ GS ERFI I+ E+F GN P +++P Q  +  I      +A ++
Sbjct: 474 NEHNHAEQPVMIHRAILGSFERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHVFALKL 533

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
              LK   + +E   +N+++N K+R    +KIP+I++ G++E     + IR        K
Sbjct: 534 KEALKKRDIFVEVLDKNDSLNKKVRLAEKQKIPMILVLGNEEVETEILSIRNREKQAQYK 593

Query: 632 VSL 634
           + L
Sbjct: 594 MPL 596


>gi|317011967|gb|ADU82575.1| threonyl-tRNA synthetase [Helicobacter pylori Lithuania75]
          Length = 612

 Score =  450 bits (1157), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 236/591 (39%), Positives = 357/591 (60%), Gaps = 37/591 (6%)

Query: 44  NGKVCDLSDPVR--EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE 101
           + KV  LSD ++  +G+  I   + P +L VIRHSCAH++A+++++++P+ +  +GP++E
Sbjct: 19  SAKVLGLSDGIKALKGTEPIYFDDSPLALEVIRHSCAHLLAQSLKALYPDAKFFVGPVVE 78

Query: 102 DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEI 161
           +GFYYDF      S ++L +IE KM+E         K+ L+ E+A E F  K +  K  +
Sbjct: 79  EGFYYDFKTASKISEEDLPKIEAKMKEFAKSKLAITKEVLTREQALERF--KGDELKHAV 136

Query: 162 LESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIY 221
           +  I   +   +Y+QGE+ DLC+GPH+ +T +    FKL K+AGAY  GD N  ML RIY
Sbjct: 137 MSKISG-DAFGVYQQGEFEDLCKGPHLPNT-RFLNHFKLTKLAGAYLGGDENNEMLIRIY 194

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLI 280
           G A+ T++ L  YL+ +EE++KRDHRKL  E+ LF   ++ G+G+  W  KG +      
Sbjct: 195 GIAFATKEGLKDYLFQIEEAKKRDHRKLGVELGLFSFDDEIGAGLPLWLPKGAR------ 248

Query: 281 SYMRRKIKD---------DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
             +R++I+D          YE +  P++L   +W+ SGH+D+Y+ NM+       T  D 
Sbjct: 249 --LRKRIEDLLSKALLLRGYEPVKGPEILKSDVWKISGHYDNYKENMYF------TTIDE 300

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
           + + +KPMNC GH+ V+   L SYR+LP+R  E+G V+R+E SG LHGL+RVR FTQDDA
Sbjct: 301 QEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDA 360

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
           H+FC+ EQ+ +E   I +    I + F F   M +LSTRP K +G D +W+ A N +K  
Sbjct: 361 HIFCSFEQIQSEVSAILDFTHKIMQAFDFSYEM-ELSTRPAKSIGDDKVWEKATNALKEA 419

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
           L       + RI+  +  G GAFYGPK +  + DA+ R WQCGTIQVD NLP RF   + 
Sbjct: 420 L------KEHRIDYKIDEGGGAFYGPKIDIKITDALRRKWQCGTIQVDMNLPERFKLAFT 473

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
           N  +    PVMIHRA+ GS ERFI I+ E+F GN P +++P Q  +  I      +A ++
Sbjct: 474 NERNHAEQPVMIHRAILGSFERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHVFALKL 533

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
              LK   + +E   +N+++N K+R    +KIP+I++ G++E     + IR
Sbjct: 534 KEALKKRDIFVEVLDKNDSLNKKVRLAEKQKIPMILVLGNEEVETEILSIR 584


>gi|109947952|ref|YP_665180.1| threonyl-tRNA synthetase [Helicobacter acinonychis str. Sheeba]
 gi|123362536|sp|Q17VZ5|SYT_HELAH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|109715173|emb|CAK00181.1| thrS [Helicobacter acinonychis str. Sheeba]
          Length = 612

 Score =  450 bits (1157), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 238/591 (40%), Positives = 356/591 (60%), Gaps = 37/591 (6%)

Query: 44  NGKVCDLSDPVR--EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE 101
           + KV  LSD V+  +GS  I   + P +L VIRHSCAH++A+++++++P+ +  +GP++E
Sbjct: 19  SAKVLGLSDGVKALKGSEPIYFDDSPLALEVIRHSCAHLLAQSLKALYPDAKFFVGPVVE 78

Query: 102 DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEI 161
           +GFYYDF      S ++L +IE KM+E         K+ L+ E+A E F  K +  K  +
Sbjct: 79  EGFYYDFKTASKISEEDLPKIEAKMKEFAKSKLAITKEVLTKEQALERF--KGDELKHAV 136

Query: 162 LESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIY 221
           +  I   +   +Y+QG + DLC+GPH+ +T +    FKL K+AGAY  GD    ML RIY
Sbjct: 137 MSKISG-DAFGVYQQGGFEDLCKGPHLPNT-RFLNHFKLTKLAGAYLGGDEKNEMLIRIY 194

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLI 280
           G A+ T++ L  YL+ +EE++KRDHRKL  E+ LF   ++ G+G+  W  KG +      
Sbjct: 195 GIAFATKEGLKDYLFQIEEAKKRDHRKLGVELGLFSFDDEIGAGLPLWLPKGAR------ 248

Query: 281 SYMRRKIKD---------DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
             +R++I+D          YE +  P++L   +W+ SGH+D+Y+ NM+       T  D 
Sbjct: 249 --LRKRIEDLLSKALLLRGYEPVKGPEILKSDVWKISGHYDNYKENMYF------TTIDE 300

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
           + + +KPMNC GH+ V+   L SYR+LP+R  E+G V+R+E SG LHGL+RVR FTQDDA
Sbjct: 301 QEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDA 360

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
           H+FC+ EQ+ +E   I +    I K F F   M +LSTRP K +G D +W+ A N +K  
Sbjct: 361 HIFCSFEQIQSEVSAILDFTHKIMKAFDFSYEM-ELSTRPAKSIGDDKVWEKATNALKEA 419

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
           L       +  IN  +  G GAFYGPK +  + DA+ R WQCGTIQVD NLP RF   + 
Sbjct: 420 L------KEHHINYKIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDMNLPERFKLAFT 473

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
           N H+    PVMIHRA+ GS ERFI I+ E+F GN P +++P Q ++  I      +A ++
Sbjct: 474 NEHNNAEQPVMIHRAILGSFERFIAILSEHFWGNFPFFVAPTQIVLIPINEEHHVFALKL 533

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
              LK   + +E   +N+++N K+R    +KIP+I++ G++E     + IR
Sbjct: 534 KEELKKRDIFVEVLDKNDSLNKKVRLAEKQKIPMILVLGNEEMETEILSIR 584


>gi|309789973|ref|ZP_07684549.1| threonyl-tRNA synthetase [Oscillochloris trichoides DG6]
 gi|308227993|gb|EFO81645.1| threonyl-tRNA synthetase [Oscillochloris trichoides DG6]
          Length = 594

 Score =  449 bits (1156), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 238/586 (40%), Positives = 356/586 (60%), Gaps = 37/586 (6%)

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIAR 132
           +RHS AH+MAEAV  I+PE +VAIGP IE GFYYDFD  +  + D+L +IE++MQ II  
Sbjct: 13  LRHSLAHVMAEAVLQIFPEGKVAIGPPIEHGFYYDFDLPRALTPDDLGEIERRMQAIIGG 72

Query: 133 DSPFLKQYLSHEKARELFESKKEAYKVEILESIPA--KEN---------VTLYRQGEWFD 181
           + PF+ + +S  +AR++F +  + YK+E+++ +     EN         ++ Y    + D
Sbjct: 73  NFPFIYREVSAAEARQIFAN--QPYKLELIDGLSKGLDENGETHHGDTVISTYTHDTFED 130

Query: 182 LCRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           LCRGPH+  TGQ+    FKLM +AGAYWRGD  +  L RIYGTAWN + EL Q+L+ LEE
Sbjct: 131 LCRGPHLEHTGQIPNDGFKLMSIAGAYWRGDEKQKQLQRIYGTAWNNKTELEQHLHNLEE 190

Query: 241 SEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           +++RDHRKL +E+ LF  +ED G G+  +  KG  +   +  Y+R  + +  Y+ + T  
Sbjct: 191 AKRRDHRKLGKELGLFFFSEDVGPGLPIFTPKGEILRYEMERYVREVQTRYGYQHVWTGN 250

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH-GLKSYRE 357
           V+ + L+ +SGH+++YR +MF      + +     F LKPMNCP H+ +FN  G+ SYR+
Sbjct: 251 VVKEQLYHRSGHYENYRDSMFPPMVESEDL----VFRLKPMNCPSHMTLFNQMGVISYRD 306

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R AEF ++YR E SG+L+GL RVR  TQDD H+FC  +Q+  E     NLI  +   
Sbjct: 307 LPMRFAEFATLYRYEDSGALNGLTRVRALTQDDCHIFCRPDQIQEEFSLALNLIREVLST 366

Query: 418 FGFEKIMVKLSTRPE--KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           + F    V+LS R +  K V  D  W+ A + ++  LD       + +      GE AFY
Sbjct: 367 YHFTDYKVRLSLRGDTGKFVADDEKWEQATSALRAALDA------NGVEYTEEAGEAAFY 420

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +++ +D +GR+WQ  TIQVDF  PSR    Y+   ++   PV++HRAV G+ ERF+
Sbjct: 421 GPKADFLARDVLGREWQLSTIQVDFIQPSRLGCEYIGEDNQPHTPVVLHRAVTGTTERFL 480

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
           G++IE++ G  PLWL+P+QA++  IT   +E AQ +   L +  + +E D   + +  KI
Sbjct: 481 GVLIEHYAGAFPLWLAPVQAVIIPITDKQMEAAQAVRQRLMAVGMRVEVDSSRDRMQGKI 540

Query: 596 REHSIKKIPIIIICGDKEASERSIGIR-RFGSTTTQKVSLLDAIPI 640
           R   ++KIP ++I G+KE    ++ +R R G         L AIP+
Sbjct: 541 RRAQLQKIPYMLIIGNKELEAGAVAVRLRSGED-------LGAIPV 579


>gi|270009374|gb|EFA05822.1| hypothetical protein TcasGA2_TC008604 [Tribolium castaneum]
          Length = 685

 Score =  449 bits (1156), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 244/623 (39%), Positives = 360/623 (57%), Gaps = 22/623 (3%)

Query: 5   IKLTFPDGSI-KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           IK+T PDG + +      T  D+A+ IS+ LA   V   +NG + DL  P+  +  +E++
Sbjct: 47  IKVTLPDGKVVEGVAWKTTAYDIAKGISQGLADNCVISKVNGVLWDLDRPLEGDCKLELL 106

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQ 121
             ++P + +V  HS AHI+ EA++ ++    +  GP IE GFYYD F +++  S+ +   
Sbjct: 107 KFDNPEAQSVFWHSTAHILGEALERVYGGC-LCYGPPIESGFYYDMFLEDKGISAGDFPY 165

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +E  M++I     PF +  +  E   E+F  K   +KV IL         T+YR G   D
Sbjct: 166 LENLMKQITKEKQPFERLEMKKEDLLEMF--KYNPFKVRILNEKVDTPTTTVYRCGPLID 223

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHVR TG++K   K+ K +  YW G ++   L R+YG ++   ++L ++  F EE+
Sbjct: 224 LCRGPHVRHTGKIKAL-KVTKNSSTYWEGKADAETLQRVYGISFPDNKQLKEWEKFQEEA 282

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVL 300
            KRDHRK+ R+ +LF   E   G  F+  +G  I+ TLI++++++  K  ++E+ +P + 
Sbjct: 283 AKRDHRKIGRDQELFFFHELSPGSCFFQPRGAHIYNTLINFIKKEYRKRGFQEVISPNIF 342

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  LWQ SGHW  Y  NMF+     D       FALKPMNCPGH  +F++  +S+RELP+
Sbjct: 343 NAKLWQVSGHWAHYADNMFSFDVEKDK------FALKPMNCPGHCLIFDNRTRSWRELPL 396

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLA+FG ++RNE SG+L GL RVR F QDDAH+FC  E +  E     + +  +Y  FGF
Sbjct: 397 RLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCALEHIKQEIKGALDFLSHVYSVFGF 456

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
               V LSTRPEK +G  A+W+ AE  +   LD             V  G+GAFYGPK +
Sbjct: 457 -TFNVVLSTRPEKYLGDLAMWEQAEKALSEGLDDFGAP------WSVNPGDGAFYGPKID 509

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
             + DA+ R  QCGTIQ+DF LP RFN  YV+   EK  PV+IHRA+ GS+ER I I+ E
Sbjct: 510 ITVHDALKRAHQCGTIQLDFQLPIRFNLSYVSESGEKKRPVIIHRAILGSVERMIAILTE 569

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF-RNETINYKIREHS 599
           +  G  P W+SP QA+V  +  +  EYAQ++   L       E D    +T+N KIR   
Sbjct: 570 SCGGKWPFWISPRQAMVIPVGPTYDEYAQDVKKKLYEAGFMAEVDTDAGDTMNKKIRNAQ 629

Query: 600 IKKIPIIIICGDKEASERSIGIR 622
           + +   I++ G+KE S +++ +R
Sbjct: 630 LAQFNFILVVGEKERSSQTVNVR 652


>gi|237785631|ref|YP_002906336.1| threonyl-tRNA synthetase [Corynebacterium kroppenstedtii DSM 44385]
 gi|237758543|gb|ACR17793.1| Threonyl-tRNA synthetase [Corynebacterium kroppenstedtii DSM 44385]
          Length = 663

 Score =  449 bits (1155), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 241/630 (38%), Positives = 359/630 (56%), Gaps = 40/630 (6%)

Query: 44  NGKVCDLS-DPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIED 102
           +G + DLS  P  +  +  +        AVIRHSC H+MA+AVQ+ +P  ++ IGP I D
Sbjct: 21  DGTIRDLSFAPTEDTEVTTVIAASDEGRAVIRHSCTHVMAQAVQAEFPGTKLGIGPAIAD 80

Query: 103 GFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQ-YLSHEKARELFESKKEAYKVEI 161
           GFYYDF  +  F+ D+L +IEK+M++II     F +  + S + ARE    K E YK+E+
Sbjct: 81  GFYYDFGTDHAFTPDDLKRIEKRMKKIIKSGQRFERVVWKSLDDAREAL--KDEPYKLEL 138

Query: 162 LES------------IPAKENVTLY-----RQGE--WFDLCRGPHVRSTGQVKKFFKLMK 202
           ++             +     +T Y     R GE  WFDLCRGPHV +T  +  F  L +
Sbjct: 139 IDDKSKGTVLDEDADLDTAGELTAYNNVNPRTGEVEWFDLCRGPHVPTTKYIAAF-ALQR 197

Query: 203 VAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED- 261
            + AYWRGD N   + RIYGTA+ +++ L +Y   +EE+E+RDHR+L  E++LF   ++ 
Sbjct: 198 SSAAYWRGDQNNDGMQRIYGTAFESKEALQEYQQRMEEAERRDHRRLGAELNLFSFPDEI 257

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           GSG   +H  G  +   +  + RR+ I+  Y  + TP +    L+Q+SGH D Y+  MF 
Sbjct: 258 GSGFPVFHPDGGIVRNEMEQHSRRRHIEAGYSFVYTPHLTKGDLFQKSGHLDFYKDGMFP 317

Query: 321 VKCAD-------DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP 373
               D       +  K  + +  KPMNCP H  +F    +SYRELP+RL EFG+VYR E 
Sbjct: 318 PMKLDEERDAEGNITKPAQDYYAKPMNCPMHNLIFASKGRSYRELPLRLFEFGTVYRYEK 377

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR-PE 432
           SG +HGL R RGFTQDDAH++CT++Q+ NE   + + IIS+ KD+G +   ++LST+ P 
Sbjct: 378 SGVIHGLTRARGFTQDDAHIYCTEDQLENELSTVLDFIISLLKDYGLDDFYLELSTKDPN 437

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
           K VGSD +W+ +  I++ V D    S  D +      G  AFYGPK     +DAIGR WQ
Sbjct: 438 KFVGSDEIWERSTEILRRVAD---KSGLDLVPDP---GGAAFYGPKISVQARDAIGRTWQ 491

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
             T+Q+DFNLP RF   Y      K  P+MIHRA+FGSIERF G+++E++ G  P WL+P
Sbjct: 492 MSTVQLDFNLPERFELEYTAPDGSKQRPIMIHRALFGSIERFFGVLLEHYAGAFPAWLAP 551

Query: 553 IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
            Q +   +      Y  E+ + L++  +  E D  ++ +  KIR H+  K P +++ G +
Sbjct: 552 HQVVGIPVADEFSPYLGEVVDKLRARGVRAEVDISDDRMQKKIRNHTTHKAPFMLLAGGR 611

Query: 613 EASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +A   ++  R    +    V +  A+ +++
Sbjct: 612 DAEAGAVSFRFLDGSQVNGVPVEKAVDVIS 641


>gi|91087799|ref|XP_967345.1| PREDICTED: similar to RH56418p [Tribolium castaneum]
          Length = 707

 Score =  449 bits (1155), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 244/623 (39%), Positives = 360/623 (57%), Gaps = 22/623 (3%)

Query: 5   IKLTFPDGSI-KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           IK+T PDG + +      T  D+A+ IS+ LA   V   +NG + DL  P+  +  +E++
Sbjct: 69  IKVTLPDGKVVEGVAWKTTAYDIAKGISQGLADNCVISKVNGVLWDLDRPLEGDCKLELL 128

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQ 121
             ++P + +V  HS AHI+ EA++ ++    +  GP IE GFYYD F +++  S+ +   
Sbjct: 129 KFDNPEAQSVFWHSTAHILGEALERVYGGC-LCYGPPIESGFYYDMFLEDKGISAGDFPY 187

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +E  M++I     PF +  +  E   E+F  K   +KV IL         T+YR G   D
Sbjct: 188 LENLMKQITKEKQPFERLEMKKEDLLEMF--KYNPFKVRILNEKVDTPTTTVYRCGPLID 245

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHVR TG++K   K+ K +  YW G ++   L R+YG ++   ++L ++  F EE+
Sbjct: 246 LCRGPHVRHTGKIKAL-KVTKNSSTYWEGKADAETLQRVYGISFPDNKQLKEWEKFQEEA 304

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVL 300
            KRDHRK+ R+ +LF   E   G  F+  +G  I+ TLI++++++  K  ++E+ +P + 
Sbjct: 305 AKRDHRKIGRDQELFFFHELSPGSCFFQPRGAHIYNTLINFIKKEYRKRGFQEVISPNIF 364

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  LWQ SGHW  Y  NMF+     D       FALKPMNCPGH  +F++  +S+RELP+
Sbjct: 365 NAKLWQVSGHWAHYADNMFSFDVEKDK------FALKPMNCPGHCLIFDNRTRSWRELPL 418

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLA+FG ++RNE SG+L GL RVR F QDDAH+FC  E +  E     + +  +Y  FGF
Sbjct: 419 RLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCALEHIKQEIKGALDFLSHVYSVFGF 478

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
               V LSTRPEK +G  A+W+ AE  +   LD             V  G+GAFYGPK +
Sbjct: 479 -TFNVVLSTRPEKYLGDLAMWEQAEKALSEGLDDFGAP------WSVNPGDGAFYGPKID 531

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
             + DA+ R  QCGTIQ+DF LP RFN  YV+   EK  PV+IHRA+ GS+ER I I+ E
Sbjct: 532 ITVHDALKRAHQCGTIQLDFQLPIRFNLSYVSESGEKKRPVIIHRAILGSVERMIAILTE 591

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF-RNETINYKIREHS 599
           +  G  P W+SP QA+V  +  +  EYAQ++   L       E D    +T+N KIR   
Sbjct: 592 SCGGKWPFWISPRQAMVIPVGPTYDEYAQDVKKKLYEAGFMAEVDTDAGDTMNKKIRNAQ 651

Query: 600 IKKIPIIIICGDKEASERSIGIR 622
           + +   I++ G+KE S +++ +R
Sbjct: 652 LAQFNFILVVGEKERSSQTVNVR 674


>gi|188588550|ref|YP_001919768.1| threonyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43]
 gi|238689641|sp|B2UYW3|SYT_CLOBA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|188498831|gb|ACD51967.1| threonyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43]
          Length = 643

 Score =  449 bits (1155), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 244/630 (38%), Positives = 364/630 (57%), Gaps = 28/630 (4%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           IK++  DGS+K F    +  ++A+SIS  LA+ A    +NGKVCDL + + E  S+ I T
Sbjct: 2   IKVSLKDGSVKEFEAGLSVYEIAKSISEGLARNACCGVVNGKVCDLRNKINEDVSLSICT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +       +RHS +H++A AV+ ++P+ ++AIGP I  GFYYDFDK+  FS+ +L ++E
Sbjct: 62  FDSQEGKDAVRHSISHVLAYAVKRLFPQTKLAIGPSIATGFYYDFDKDVAFSAQDLEKLE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M++II  +    K  L  ++A EL   K E YKVE++  +   E ++ Y+ GE+ DLC
Sbjct: 122 AEMKKIIKENPSIEKFELPRDEALELM--KDEPYKVELINDLGEDEIISFYKIGEFTDLC 179

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPHV S   +K   KL + AGAYW+GD    ML+RIYGTA+  + EL +YL  +EE++K
Sbjct: 180 AGPHVMSLKPIKAL-KLTRSAGAYWKGDEKNKMLTRIYGTAFLKKSELDEYLEAIEEAKK 238

Query: 244 RDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKDDYEE-----INTP 297
           RDH KL RE+ LF   E+ G G+     KG KI QTL    +R ++D+ E        TP
Sbjct: 239 RDHNKLGRELKLFTTDENVGQGLPLLMPKGAKIVQTL----QRWVEDEEERRGYVLTKTP 294

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    L++ SGHWD Y+  MF +    D  KD   FAL+PM CP    ++N    SYR+
Sbjct: 295 LMAKSDLYKISGHWDHYKDGMFVL---GDEEKDEEVFALRPMTCPFQYTIYNAEQHSYRD 351

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R  E  +++RNE SG +HGL+RVR FT  D H+  T EQ+  E   +  LI  + K 
Sbjct: 352 LPIRYGETSTLFRNESSGEMHGLIRVRQFTLADGHLIVTPEQLEEEFKGVLELIQYLMKT 411

Query: 418 FGF-EKIMVKLS----TRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
            G  E I  + S       EK +     W+  ++ M+ +LD +K      IN      E 
Sbjct: 412 LGIDEDISYRFSKWDPNNTEKYINDPEAWNKTQDTMRTILDHLK------INYVEADDEA 465

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           AFYGPK +   ++  G++    T+Q+DF L  RF+  Y++ + EK  P +IHR+  G  E
Sbjct: 466 AFYGPKLDLQCRNVHGKEDTLFTVQIDFALAERFDMSYIDKNGEKKRPYIIHRSSIGCYE 525

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
           R + ++IE + G  P WLSP+Q  V  I+    +YA+ +   L++  + IE D+R E I 
Sbjct: 526 RTLAMLIEKYAGAFPTWLSPVQVKVLPISDKYNDYAESVVKSLRNKGVRIEADYRAEKIG 585

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIR 622
           YKIRE  +++ P I++ G+KEA+   + +R
Sbjct: 586 YKIREARLERTPYILVVGEKEAANNEVSVR 615


>gi|84496326|ref|ZP_00995180.1| threonyl-tRNA synthetase [Janibacter sp. HTCC2649]
 gi|84383094|gb|EAP98975.1| threonyl-tRNA synthetase [Janibacter sp. HTCC2649]
          Length = 661

 Score =  449 bits (1155), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 251/659 (38%), Positives = 370/659 (56%), Gaps = 56/659 (8%)

Query: 19  VHATGSDVAESISRSLA------KKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLA 71
           VH  G + +  +  + A      +  +   +NG++ DL+  + +G ++E +T ++   L 
Sbjct: 7   VHVAGDERSVDLETTAADLFRDDRNVLVARVNGELRDLAHVLADGDTVEPVTAQEQDGLD 66

Query: 72  VIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIA 131
           V+RHS AH++A+AVQ + P+ ++ IGP + DGFYYDFD  +PF  D+L  +EK MQ+II 
Sbjct: 67  VLRHSAAHVLAQAVQQLKPDAKLGIGPPVRDGFYYDFDVAEPFQPDDLKALEKSMQKIIN 126

Query: 132 RDSPFLKQYLSHEKARELFESKKEAYKVEI--LESIPAKE------------NVTLY--- 174
               F+++ +S + A  L E K E YK E+  L+   A E             +T+Y   
Sbjct: 127 EGQTFVRREISDDDA--LVELKDEPYKCELIGLKGGSASEAADGADVEVGGAQLTIYDNV 184

Query: 175 -RQG--EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQEL 231
            R G   W DLCRGPHV ST  +   FK+M+ A AYWRG    P L R+YGTAW T++EL
Sbjct: 185 RRDGTKAWGDLCRGPHVPSTKVLGNAFKVMRSAAAYWRGSEKNPQLQRVYGTAWPTKEEL 244

Query: 232 TQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKD 289
             +L  L E+EKRDHRKL  E+DLF   ++ GSG+  +H KG  I + +  Y+RR+ I++
Sbjct: 245 RAHLERLAEAEKRDHRKLGAELDLFSFPDELGSGLPVFHPKGGVIKREMEDYVRRRHIEE 304

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
            ++ + TP +    L+  SGH   Y   MF     + +      + LK MNCP H  +F+
Sbjct: 305 GFDYVGTPHISKDGLFHTSGHLPYYADTMFPPMEFEGS-----KYQLKAMNCPMHNLIFS 359

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
              +SYRELP+R  EFGSVYR E SG +HGL RVRG TQDD+H + T EQ   E   + +
Sbjct: 360 SRGRSYRELPLRFFEFGSVYRYEKSGVVHGLTRVRGMTQDDSHSYVTAEQAPAEIKHLLD 419

Query: 410 LIISIYKDFGFEKIMVKLSTR------PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            ++S+ +DFG E   ++LSTR        K +GSD  W+ A ++++ V            
Sbjct: 420 FVLSLLRDFGLEDFYLELSTRDTEGEKSAKFIGSDEQWEVATSVLEKVA----------T 469

Query: 464 NTGVLL----GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
           ++G+ L    G  AFYGPK     +DAIGR WQ  TIQ DFN P RF   Y  S   +  
Sbjct: 470 DSGLELVADPGGAAFYGPKISVQARDAIGRTWQMSTIQYDFNQPERFGLEYQASDGSRQQ 529

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH 579
           PVMIH A FGSIERF G+++E++ G  P+WLSP+Q +   +     +Y  ++ + +K+  
Sbjct: 530 PVMIHSAKFGSIERFFGVLVEHYAGAFPVWLSPVQVLGLPVADEYNDYLWDVLSQMKAKG 589

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           + +E D  ++    KIR  S  K+P  +I G+ + S  ++  R    +    V + DAI
Sbjct: 590 IRVELDDSDDRFPKKIRNASKAKVPFALIAGEDDRSNNAVSFRYRDGSQKNGVPIEDAI 648


>gi|134098578|ref|YP_001104239.1| threonyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
 gi|291008224|ref|ZP_06566197.1| threonyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
 gi|133911201|emb|CAM01314.1| threonyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
          Length = 674

 Score =  449 bits (1155), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 252/658 (38%), Positives = 372/658 (56%), Gaps = 50/658 (7%)

Query: 22  TGSDVAESISRSLAKKAVAVAIN--GKVCDLS-DPVREGSIEIITPEDPRSLAVIRHSCA 78
            G  V E+   S    AV V  +  G + DLS  P  +  +E +        +VIRHS A
Sbjct: 9   AGEAVLEAGLPSKGADAVVVVRDHEGALRDLSWAPESDVEVEAVAACTEEGRSVIRHSAA 68

Query: 79  HIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLK 138
           H++A+AVQ +  E ++ IGP + DGFYYDFD E PF+ ++L  +EK+M++II     F +
Sbjct: 69  HVLAQAVQQLHAEAKLGIGPPVRDGFYYDFDVEHPFTPEDLQALEKRMKQIIKSGQKFSR 128

Query: 139 QYL-SHEKARELFESKKEAYKVEILESIPAKENV-------------TLY----RQGE-- 178
           + L S E ARE  E   E YK+E+++     + V             T+Y    R GE  
Sbjct: 129 RRLDSVEAARE--ELAGEPYKLELVDLKSGSDEVDTSEVMEVGGGDLTVYDNVDRHGEVV 186

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           W DLCRGPHV  T  +  F KLM+VA AYWRGD +   L R+YGTAW ++++L ++L  L
Sbjct: 187 WGDLCRGPHVPHTRYIPAF-KLMRVAAAYWRGDQSNQQLQRVYGTAWESKEKLDEHLELL 245

Query: 239 EESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
            E+E+RDHR+L  E+DLF   ++ GSG+  +H KG  I + +  Y RR+ +   YE + +
Sbjct: 246 AEAERRDHRRLGSELDLFSFPDEIGSGLPVFHPKGGIIRKEMEDYSRRRHEQAGYEFVYS 305

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADD-------TIKDLRTFALKPMNCPGHVAVFN 349
           P +    L++ SGH   Y+  MF     D+         K  + + LKPMNCP H  ++ 
Sbjct: 306 PHITKDALFKTSGHLSWYKDGMFPAMHLDEERDEDGEVRKPGQDYYLKPMNCPFHNLIYR 365

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
              +SYRELP+RL EFGSVYR E SG +HGL RVRG TQDDAH++CT EQ+ +E   + N
Sbjct: 366 SRGRSYRELPLRLFEFGSVYRYEKSGVVHGLTRVRGMTQDDAHIYCTPEQLQDELKSLLN 425

Query: 410 LIISIYKDFGFEKIMVKLSTR-PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
            ++++ +DFG +   ++LSTR  EK VG D  W  A   ++   ++          +G+ 
Sbjct: 426 FVLNLLRDFGLDDFYLELSTRNEEKYVGDDESWRVATEALREAAES----------SGLE 475

Query: 469 L----GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIH 524
           L    G  AFYGPK     KDA+GR WQ  TIQVD++LP RF   Y +S   +  P+ IH
Sbjct: 476 LVPDPGGAAFYGPKISVQAKDALGRTWQMSTIQVDYHLPDRFELEYTSSDGSRQRPIKIH 535

Query: 525 RAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIET 584
           RA+FGSIERF G++ E++ G  P WL+P+Q +   I    +++   +A  L++  + +E 
Sbjct: 536 RALFGSIERFFGVLTEHYAGAFPAWLAPVQVVGIPIADEHLDHLDRVAKALRAKGIRVEV 595

Query: 585 DFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           D  ++ +  KIR H+ +K+P +++ G K+    ++  R    T    V +  A+  L 
Sbjct: 596 DASDDRMQKKIRNHTTQKVPFLLLAGGKDVEADAVSFRFRDGTQINGVPVDTAVAALA 653


>gi|309811262|ref|ZP_07705053.1| threonine--tRNA ligase [Dermacoccus sp. Ellin185]
 gi|308434802|gb|EFP58643.1| threonine--tRNA ligase [Dermacoccus sp. Ellin185]
          Length = 665

 Score =  449 bits (1154), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 256/675 (37%), Positives = 369/675 (54%), Gaps = 55/675 (8%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SI 59
           M  +I LT  +G  +      TG+D+         K  + + I+G++ DL   + +G S+
Sbjct: 1   MSENITLTV-NGEPREVEQGTTGTDLFGG-----DKAVLVMRIDGELRDLFREIPDGASV 54

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           E +T +DP  LAV+RHS AH++A+AVQ I P  ++ IGP + DGFYYDFD  + F+ D+L
Sbjct: 55  EPVTAQDPEGLAVLRHSAAHVLAQAVQQINPSAKLGIGPPVTDGFYYDFDVAEAFTPDDL 114

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-------------ESIP 166
            ++EK MQ I+     F ++ ++   A  L E   E YK E++             E+  
Sbjct: 115 KKLEKAMQRIVNEGQTFNRRVIT--DAEGLEELAHEPYKCELIGLKGNAANAAEGAEAEV 172

Query: 167 AKENVTLY----RQG--EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRI 220
               +T+Y    R G   W DLCRGPHV ST  +   FKLM+ A AYWRG    P L RI
Sbjct: 173 GGGELTIYDNVRRDGTVAWGDLCRGPHVPSTKVLGNAFKLMRSAAAYWRGSEKNPQLQRI 232

Query: 221 YGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTL 279
           YGTAW T+ EL  YL  L E+EKRDHRKL  E+DLF   E+ G G+  +H KG  I + +
Sbjct: 233 YGTAWPTKDELKAYLERLAEAEKRDHRKLGAELDLFSFPENIGPGLPVFHPKGGIIKREM 292

Query: 280 ISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKP 338
             Y+RR+ I++ +  + TP +  + L+  SGH   Y   MF     D      + + LK 
Sbjct: 293 EDYVRRRHIEEGFSYVGTPHIAKEDLFYTSGHLPYYADGMFPPLDVDG-----QNYRLKA 347

Query: 339 MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE 398
           MNCP H  +F    +SYRELP+R  EFG+VYR+E SG L GL RVR  TQDD+H + T E
Sbjct: 348 MNCPMHNEIFRSRGRSYRELPLRFFEFGTVYRDEKSGVLSGLTRVRMITQDDSHSYVTPE 407

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLSTR------PEKRVGSDALWDDAENIMKGVL 452
           Q   E   + + I+ + +DFG     ++LSTR       +K +G+D  WD A  ++  V 
Sbjct: 408 QAPGEIKHLLDFILGLLRDFGMNDFYLELSTRDVDGDKKDKFIGTDEQWDIATKVLSDVA 467

Query: 453 DTIKNSSQDRINTGVLL----GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
                     + +G+ L    G  AFYGPK     +DAIGR WQ  TIQ DFN P+RF  
Sbjct: 468 ----------LESGLELVPDPGGAAFYGPKISVQARDAIGRTWQMSTIQYDFNQPARFGL 517

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYA 568
            Y  +   +  PVM+H A FGSIERF+G+++E++ G  P WL+P+Q +   +     +Y 
Sbjct: 518 EYQAADGSRQQPVMVHSAKFGSIERFLGVLVEHYAGAFPAWLAPVQVLAVPVAEEYYDYL 577

Query: 569 QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
           Q++A  L+   + +E D  ++    KIR  S  K P I+I G+++    ++  R    + 
Sbjct: 578 QDVAMKLREAGVRVEVDMSDDRFPKKIRNASKSKAPFILIAGEEDRDNGAVSFRFRDGSQ 637

Query: 629 TQKVSLLDAIPILTK 643
              V + DAI  +T+
Sbjct: 638 KNGVPVADAIAEITR 652


>gi|158299584|ref|XP_319682.4| AGAP008929-PA [Anopheles gambiae str. PEST]
 gi|157013587|gb|EAA14818.5| AGAP008929-PA [Anopheles gambiae str. PEST]
          Length = 761

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 244/644 (37%), Positives = 370/644 (57%), Gaps = 22/644 (3%)

Query: 5   IKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           IK+T PDG  +       T  DVA  IS+ LA   V   +N ++ DL  P+  +  ++++
Sbjct: 123 IKVTLPDGKQVDGLSWQTTPYDVARGISQGLADNTVIARVNNELWDLDRPLEGDCKLQLL 182

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQ 121
             +DP + AV  HS AHI+ EA++  +    +  GP I++GFYYD F +    S+ +   
Sbjct: 183 KFDDPDAQAVFWHSSAHILGEAMEKRYGG-HLCYGPPIDNGFYYDMFLEGSGISNQDYGA 241

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +E +++ I+    PF +  +       +FE  +  +KV IL      E  T+YR G   D
Sbjct: 242 LESEVKRIVKEKQPFERLEMKKADLLRMFEYNQ--FKVRILNEKVTTETTTVYRCGPLID 299

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHVR+TG+VK   K++K +  YW G ++   L R+YG ++   ++L ++    EE+
Sbjct: 300 LCRGPHVRNTGKVKAL-KVVKNSATYWEGKADAETLQRVYGISFPDPKQLKEWEKIQEEA 358

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVL 300
            KRDHRKL +E +LF   E   G  F+  KG  I+ TL+ ++R +  K  ++E+ +P + 
Sbjct: 359 AKRDHRKLGKEQELFFFHELSPGSCFFQPKGAHIYNTLMGFIRSEYRKRGFQEVISPNIY 418

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  LWQ SGHW  Y  NMF+ +   +T      FALKPMNCPGH  +F+H  +S+RELP+
Sbjct: 419 NAKLWQTSGHWQHYAENMFSFESEKET------FALKPMNCPGHCLMFDHRNRSWRELPL 472

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+A+FG ++RNE SG+L GL RVR F QDDAH+FC  +Q+  E     + +  +Y  FGF
Sbjct: 473 RMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCMPDQIREEITGCLDFLRHVYTIFGF 532

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
              +V LSTRPEK +G   +W++AE  +   LD      ++        G+GAFYGPK +
Sbjct: 533 TFNLV-LSTRPEKYLGEIEVWNEAEKALADSLDKFGEPWKENP------GDGAFYGPKID 585

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
             + DA+ R+ QC TIQ+DF LP RFN  Y++   EK  PV+IHRAV GS+ER I I+ E
Sbjct: 586 ITIMDALKRNHQCATIQLDFQLPIRFNLNYIDDSGEKKRPVIIHRAVLGSVERMIAILTE 645

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF-RNETINYKIREHS 599
           N+ G  P WLSP Q +V  +  +  +YA ++   L      +E D    +T+N KIR   
Sbjct: 646 NYAGKWPFWLSPRQVMVVPVGPAYDDYADQVRQRLHEAGFMVEADLDAGDTMNKKIRNAQ 705

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           + +   I++ G+KE S  ++ +R   +    +V++ D +  L+K
Sbjct: 706 LAQFNFILVVGEKERSSETVNVRTRDNKVHGEVTVNDLVTKLSK 749


>gi|210134324|ref|YP_002300763.1| threonyl-tRNA synthetase [Helicobacter pylori P12]
 gi|238065114|sp|B6JPM2|SYT_HELP2 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|210132292|gb|ACJ07283.1| threonyl-tRNA synthetase [Helicobacter pylori P12]
          Length = 612

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 235/591 (39%), Positives = 357/591 (60%), Gaps = 37/591 (6%)

Query: 44  NGKVCDLSDPVR--EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE 101
           + KV  LSD ++   G+  I   + P +L VIRHSCAH++A+++++++P+ +  +GP++E
Sbjct: 19  SAKVLGLSDGIKALNGTEPIYFDDSPLALEVIRHSCAHLLAQSLKALYPDAKFFVGPVVE 78

Query: 102 DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEI 161
           +GFYYDF      S ++L +IE KM+E         K+ L+ E+A E F  K +  K  +
Sbjct: 79  EGFYYDFKTASKISEEDLPKIEAKMKEFAKLKLAITKETLTREQALERF--KGDELKHAV 136

Query: 162 LESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIY 221
           +  I   +   +Y+QGE+ DLC+GPH+ +T +    FKL K+AGAY  GD N  ML RIY
Sbjct: 137 MSKISG-DAFGVYQQGEFEDLCKGPHLPNT-RFLNHFKLTKLAGAYLGGDENNEMLIRIY 194

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLI 280
           G A+ T++ L  YL+ +EE++KRDHRKL  E+ LF   ++ G+G+  W  KG +      
Sbjct: 195 GIAFATKEGLKDYLFQIEEAKKRDHRKLGVELGLFSFDDEIGAGLPLWLPKGAR------ 248

Query: 281 SYMRRKIKD---------DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
             +R++I+D          YE +  P++L   +W+ SGH+D+Y+ NM+       T  D 
Sbjct: 249 --LRKRIEDLLSQALLLRGYEPVKGPEILKSDVWKISGHYDNYKENMYF------TTIDE 300

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
           + + +KPMNC GH+ V+   L SYR+LP+R  E+G V+R+E SG LHGL+RVR FTQDDA
Sbjct: 301 QEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDA 360

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
           H+FC+ EQ+ +E   I +    I + F F   M +LSTRP K +G D +W+ A + +K  
Sbjct: 361 HIFCSFEQIQSEVSAILDFTHKIMQAFDFSYEM-ELSTRPAKSIGDDEVWEKATSALKEA 419

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
           L       + RI+  +  G GAFYGPK +  + DA+ R WQCGTIQVD NLP RF   + 
Sbjct: 420 L------KEHRIDYKIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDMNLPERFKLAFT 473

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
           N  +    PVMIHRA+ GS ERFI I+ E+F GN P +++P Q  +  I      +A ++
Sbjct: 474 NERNHAEQPVMIHRAILGSFERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHVFALKL 533

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
             +LK   + +E   +N+++N K+R    +KIP+I++ G++E     + IR
Sbjct: 534 KEVLKKRDIFVEVLDKNDSLNKKVRLAEKQKIPMILVLGNEEVETEILSIR 584


>gi|108562547|ref|YP_626863.1| threonyl-tRNA synthetase [Helicobacter pylori HPAG1]
 gi|123247050|sp|Q1CV33|SYT_HELPH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|107836320|gb|ABF84189.1| threonyl-tRNA synthetase [Helicobacter pylori HPAG1]
          Length = 612

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 236/591 (39%), Positives = 356/591 (60%), Gaps = 37/591 (6%)

Query: 44  NGKVCDLSDPVR--EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE 101
           + KV  LSD ++   G+  I   + P +L VIRHSCAH++A+++++++P+ +  +GP++E
Sbjct: 19  SAKVLGLSDGIKALNGTEPIYFDDSPLALEVIRHSCAHLLAQSLKALYPDAKFFVGPVVE 78

Query: 102 DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEI 161
           +GFYYDF      S ++L +IE KM+E         K+ L+ E+A E F  K +  K  +
Sbjct: 79  EGFYYDFKTASKISEEDLPKIEAKMKEFAKSKLAITKETLTREQALERF--KGDELKHAV 136

Query: 162 LESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIY 221
           +  I   +   +Y+QGE+ DLC+GPH+ +T +    FKL K+AGAY  GD N  ML RIY
Sbjct: 137 MSKISG-DIFGVYKQGEFEDLCKGPHLPNT-RFLNHFKLTKLAGAYLGGDENNEMLIRIY 194

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLI 280
           G A+ T++ L  YL+ +EE++KRDHRKL  E+ LF   ++ G+G+  W  KG +      
Sbjct: 195 GIAFATKEGLKDYLFQIEEAKKRDHRKLGVELGLFSFDDEIGAGLPLWLPKGAR------ 248

Query: 281 SYMRRKIKD---------DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
             +R++I+D          YE +  P++L   +W+ SGH+D+Y+ NM+       T  D 
Sbjct: 249 --LRKRIEDLLSQALLLRGYEPVKGPEILKSDVWKISGHYDNYKENMYF------TTIDE 300

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
           + + +KPMNC GH+ V+   L SYR+LP+R  E+G V+R+E SG LHGL+RVR FTQDDA
Sbjct: 301 QEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDA 360

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
           H+FC+ EQ+ +E   I +    I + F F   M +LSTRP K +G D +W+ A N +K  
Sbjct: 361 HIFCSFEQIQSEVSAILDFTHKIMQAFDFSYEM-ELSTRPAKSIGDDEVWEKATNALKEA 419

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
           L       + RI+  +  G GAFYGPK +  + DA+ R WQCGTIQVD NLP RF   + 
Sbjct: 420 L------KEHRIDYKIDEGGGAFYGPKIDIKITDALRRKWQCGTIQVDMNLPERFKLAFT 473

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
           N  +    PVMIHRA+ GS ERFI I+ E+F GN P +++P Q  +  I      +A ++
Sbjct: 474 NERNHAEQPVMIHRAILGSFERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHVFALKL 533

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
              LK   + +E   +N+++N K+R    +KIP+I++ G++E     + IR
Sbjct: 534 KEELKKRDIFVEVLDKNDSLNKKVRLAEKQKIPMILVLGNEEVETEILSIR 584


>gi|227488772|ref|ZP_03919088.1| threonine--tRNA ligase [Corynebacterium glucuronolyticum ATCC
           51867]
 gi|227542231|ref|ZP_03972280.1| threonine--tRNA ligase [Corynebacterium glucuronolyticum ATCC
           51866]
 gi|227091194|gb|EEI26506.1| threonine--tRNA ligase [Corynebacterium glucuronolyticum ATCC
           51867]
 gi|227182060|gb|EEI63032.1| threonine--tRNA ligase [Corynebacterium glucuronolyticum ATCC
           51866]
          Length = 689

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 243/630 (38%), Positives = 363/630 (57%), Gaps = 41/630 (6%)

Query: 45  GKVCDLS-DPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG 103
           G + DLS  P  + ++  +         VIRHS  H+MA+AVQ+ +P  ++ IGP +E+G
Sbjct: 50  GDLKDLSFTPEVDTTMTTVIAASDEGRGVIRHSATHVMAQAVQAEFPGTKLGIGPAVENG 109

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLK-QYLSHEKARELFESKKEAYKVEIL 162
           FYYDF  E+ F+ ++L +IEK+M++II     F +  + S ++AR      +E YK+E++
Sbjct: 110 FYYDFGTERSFTPEDLKKIEKRMKKIIKTGQRFERFAWESLDEARTAM--AEEPYKLELI 167

Query: 163 ES------------IPAKENVTLYR-------QGEWFDLCRGP-HVRSTGQVKKFFKLMK 202
           E             + A   +T YR       + EWFDLCRGP HV +T  +  F KL++
Sbjct: 168 EDKSKGTVLDEAADVDAHGELTGYRNVNPRTNETEWFDLCRGPAHVPTTRYIPAF-KLLR 226

Query: 203 VAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED- 261
            + AYW+GD +R  + RIYGTAW +++ L  YL  LEE+EKRDHR+L +E+DLF   ++ 
Sbjct: 227 SSAAYWKGDQSRDGMQRIYGTAWESKEALDDYLTMLEEAEKRDHRRLGQELDLFSFPDEI 286

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           GSG   +H  G  I   +  + RR+ +++ Y  +NTP +    L+Q+SGH D Y   MF 
Sbjct: 287 GSGFPVFHPDGGIIRLEMEEHSRRRHLENGYSFVNTPHITKGDLFQKSGHLDFYADGMFP 346

Query: 321 VKCAD-------DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP 373
               D       +  K  + +  KPMNCP H  ++    +SYRELP+RL EFG+VYR E 
Sbjct: 347 PMQLDGEYDEDGNCTKQPQDYYAKPMNCPMHNLIYASRGRSYRELPLRLFEFGTVYRYEK 406

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR-PE 432
           SG +HGL R RGFTQDDAH++CT+EQ+ +E   + N I+S+ KD+G     ++LST+ P 
Sbjct: 407 SGVVHGLTRARGFTQDDAHIYCTEEQLEDELTGVLNFILSLLKDYGLNDFYLELSTKDPN 466

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
           K VGSD +W+ +  I++ V    K S  + +         AFYGPK     +DAIGR WQ
Sbjct: 467 KFVGSDEIWEKSTAILERV---AKASGLELVPDPA---GAAFYGPKISVQARDAIGRTWQ 520

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
             T+Q+DFNLP RF   Y  S   K  P+MIHRA+FGSIERF G+++E++ G  P WL+P
Sbjct: 521 MSTVQLDFNLPERFELEYTASDGSKKRPIMIHRALFGSIERFFGVLLEHYAGAFPAWLAP 580

Query: 553 IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
            Q     +    V+Y + +   LK+  +  E D  ++ +  KIR H+  K+P +++ G +
Sbjct: 581 HQVTGIPVADEFVDYLEGVIGKLKAQGIRAEVDTSDDRMQKKIRNHTTGKVPFMLLAGAR 640

Query: 613 EASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +    ++  R    +    V    A+ I+T
Sbjct: 641 DQEAGAVSFRFLDGSQVNGVPADKAVEIIT 670


>gi|157115843|ref|XP_001658309.1| threonyl-tRNA synthetase [Aedes aegypti]
 gi|108883479|gb|EAT47704.1| threonyl-tRNA synthetase [Aedes aegypti]
          Length = 716

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 244/644 (37%), Positives = 372/644 (57%), Gaps = 22/644 (3%)

Query: 5   IKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           IK+T PDG  +      +T  DVA+ IS+ LA   V   +N ++ DL  P+  +  ++++
Sbjct: 78  IKVTLPDGKEVDATSWESTPYDVAKGISQGLADNTVIARVNNELWDLDRPLEGDCKLQLL 137

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQ 121
             +DP + AV  HS AHI+ EA++  +    +  GP IE+GFYYD F +    S+ +   
Sbjct: 138 KFDDPDAQAVFWHSSAHILGEAMEKRYGG-HLCYGPPIENGFYYDMFLEGSGISNQDYGA 196

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +E ++++I+    PF +  +      ++FE  +  +K+ IL      +  T+YR G   D
Sbjct: 197 LESEVKKIVKDKQPFERLEMKKSDLLKMFEYNE--FKLRILNEKVTTDTTTVYRCGPLID 254

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHVR TG+VK   K++K +  YW G ++   L RIYG ++   ++L ++    EE+
Sbjct: 255 LCRGPHVRHTGKVKAL-KVVKNSSTYWEGKADAETLQRIYGISFPEPKQLKEWEKIQEEA 313

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVL 300
            KRDHRKL +E +LF   E   G  F+  KG  I+ TL++++R +  K  ++E+ TP + 
Sbjct: 314 AKRDHRKLGKEQELFFFHELSPGSCFFQPKGAHIYNTLMNFIRDEYRKRGFQEVITPNIY 373

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  LWQ SGHW  Y  NMF+ +   +T      FALKPMNCPGH  +F+H  +S+RELP+
Sbjct: 374 NAKLWQTSGHWQHYAENMFSFESEKET------FALKPMNCPGHCLMFDHRNRSWRELPL 427

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+A+FG ++RNE SG+L GL RVR F QDDAH+FC  +Q+  E +   + +  +Y  FGF
Sbjct: 428 RMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCMPDQIKQEIIGCLDFLAHVYGVFGF 487

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
              +V LSTRPEK +G   +W++AE  +   LD      ++        G+GAFYGPK +
Sbjct: 488 TFNLV-LSTRPEKYLGDIEVWNEAEKALAESLDKFGQPWKENP------GDGAFYGPKID 540

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
             + DA+ R+ QC TIQ+DF LP RFN  Y++   EK  PV+IHRAV GS+ER I I+ E
Sbjct: 541 ITIMDALKRNHQCATIQLDFQLPIRFNLNYIDDSGEKKRPVIIHRAVLGSVERMIAILTE 600

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF-RNETINYKIREHS 599
           ++ G  P WLSP Q +V  +     +YA ++   L       E D    +T+N KIR   
Sbjct: 601 SYAGKWPFWLSPRQVMVVPVGPQYDDYADKVRQRLHEAGFMAEADLDAGDTMNKKIRNAQ 660

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           + +   I++ G+KE S  ++ +R   +    +VS+ D +  L +
Sbjct: 661 LAQFNFILVVGEKERSSETVNVRTRDNKVHGEVSVDDLVAKLRR 704


>gi|251777990|ref|ZP_04820910.1| threonine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
 gi|243082305|gb|EES48195.1| threonine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
          Length = 643

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 245/630 (38%), Positives = 365/630 (57%), Gaps = 28/630 (4%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           IK++  DGS+K F    +  ++A+SIS  LA+ A    +NGKVCDL + + E  S+ I T
Sbjct: 2   IKVSLKDGSVKEFEAGLSVYEIAKSISEGLARNACCGVVNGKVCDLRNKINEDVSLSICT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +       +RHS +H++A AV+ ++P+ ++AIGP I  GFYYDFDK+  FS+ +L ++E
Sbjct: 62  FDSQEGKDTVRHSISHVLAYAVKRLFPQTKLAIGPSITTGFYYDFDKDVAFSAQDLEKLE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M++II  +    K  L  ++A EL   K E YKVE++  +   E ++ Y+ GE+ DLC
Sbjct: 122 AEMKKIIKENPSIEKFELPRDEALELM--KDEPYKVELINDLGEDEIISFYKIGEFTDLC 179

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPHV +   +K   KL++ AGAYW+GD    ML+RIYGTA+  + EL +YL  +EE++K
Sbjct: 180 AGPHVMTLKPIKAI-KLIRSAGAYWKGDEKNKMLTRIYGTAFLKKSELDEYLEAVEEAKK 238

Query: 244 RDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKDDYEE-----INTP 297
           RDH KL RE+ LF   E+ G G+     KG KI QTL    +R I+D+ E        TP
Sbjct: 239 RDHNKLGRELKLFTTDENVGQGLPLLMPKGAKIVQTL----QRWIEDEEERRGYVLTKTP 294

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    L++ SGHWD Y+  MF +    D  KD   FAL+PM CP    ++N    SYR+
Sbjct: 295 LMAKSDLYKISGHWDHYKDGMFVL---GDEEKDEEVFALRPMTCPFQYTIYNAEQHSYRD 351

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R  E  +++RNE SG +HGL+RVR FT  D H+  T EQ+  E   +  LI  I K 
Sbjct: 352 LPIRYGETSTLFRNESSGEMHGLIRVRQFTLADGHLIVTPEQLEEEFKGVLELIKYIMKT 411

Query: 418 FGF-EKIMVKLS----TRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
            G  E I  + S       EK +     W+  ++ M+ +LD +K      I+      E 
Sbjct: 412 LGIDEDISYRFSKWDPNNTEKYINDPDAWNKTQDTMRTILDHLK------IDYVEADDEA 465

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           AFYGPK +   K+  G++    T+Q+DF L  RF+  Y++ + EK  P +IHR+  G  E
Sbjct: 466 AFYGPKLDLQFKNVHGKEDTIITLQIDFALAERFDMSYIDKNGEKKRPYIIHRSSIGCYE 525

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
           R + ++IE + G  P WLSP+Q  V  I+    +YA+ +   L++  + IE D+R E I 
Sbjct: 526 RTLAMLIEKYAGAFPTWLSPVQVKVLPISDKYNDYAESVVKSLRNKGVRIEADYRAEKIG 585

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIR 622
           YKIRE  +++ P I++ G+KEA+   + +R
Sbjct: 586 YKIREARLERTPYILVVGEKEAANSEVSVR 615


>gi|320580027|gb|EFW94250.1| Threonyl-tRNA synthetase [Pichia angusta DL-1]
          Length = 714

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 253/650 (38%), Positives = 369/650 (56%), Gaps = 30/650 (4%)

Query: 5   IKLTFPDGSIKNFPV-HATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEII 62
           IK+T  DG++K       T  D+A+ I +S  ++ V   +NG++ DL  P    S +E  
Sbjct: 69  IKVTLKDGTVKEATSWETTPFDIAKEIGKSFCERQVISKVNGELWDLERPFEADSKLEFF 128

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF---DKEQPFSSDEL 119
             + P    V  HS AHI+ E  ++ +    +  GP  EDGF+YD    + +   S ++ 
Sbjct: 129 DFDSPEGKQVFWHSSAHILGEGCENHYG-AHLCFGPPTEDGFFYDMAIDEGDYKVSQNDF 187

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES-IPAKENVTLYRQGE 178
           + IE      I    PF +  ++ ++  E+F   K  YKV +++S IP   + T+YR G 
Sbjct: 188 SDIETLCSRAIKEKQPFERLVMTKDELLEMFSYNK--YKVALIKSKIPDGTSSTVYRCGP 245

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLCRGPHV  TG+VK F K++K + +Y+ GDSN   L R+YG ++  +  + ++L FL
Sbjct: 246 LIDLCRGPHVPHTGRVKAF-KVLKNSSSYFLGDSNNDSLQRVYGVSFPDKALMKEHLKFL 304

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
           EE+  RDHRK+ RE DLF   E   G  FW   G +I+  L   +R +  K  YEE+ TP
Sbjct: 305 EEAAARDHRKIGREQDLFFFHEMSPGSCFWLPHGARIYNGLCELLRTQYRKRGYEEVITP 364

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  LW+ SGHW +Y+ NMF  +   DT      F LKPMNCPGH  +F    +SYRE
Sbjct: 365 NMYNSKLWETSGHWANYKENMFTFEVEKDT------FGLKPMNCPGHCLMFKSRERSYRE 418

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP R+A+FG ++RNE SG+L GL RVR F QDDAH+FCT++Q+ +E   + + +  IY  
Sbjct: 419 LPWRVADFGVIHRNEFSGALSGLTRVRRFQQDDAHIFCTQDQIEDEISGVFDFLQHIYGI 478

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFE   ++LSTRPEK VG    W++AE  ++  L+  K   +  +N     G+GAFYGP
Sbjct: 479 FGFE-FKMELSTRPEKYVGDIETWNNAEAKLESALN--KWGGKWELNP----GDGAFYGP 531

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFY--VNSHSEKCHPVMIHRAVFGSIERFI 535
           K + ++ DA+ R  QC TIQ+DF LP+RF   +   +  +E   PVMIHRA+ GSIER  
Sbjct: 532 KIDIMISDALKRWHQCATIQLDFQLPNRFELEFRGKDDSAEVQRPVMIHRAILGSIERMT 591

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            I+ E+F G  P WLSP Q +V  +     +YAQE+  LL++     + D    T+  K+
Sbjct: 592 AILTEHFAGKWPFWLSPRQILVVPVGVRYFDYAQEVQKLLQTEGFYADVDLSGNTLQKKV 651

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK----VSLLDAIPIL 641
           R   ++K   I I G++E +E+++ IR       Q     V L D +P L
Sbjct: 652 RTGQLQKYNFIFIVGEQEQNEKAVNIRNRDIQELQSKNDMVKLNDVLPKL 701


>gi|317176942|dbj|BAJ54731.1| threonyl-tRNA synthetase [Helicobacter pylori F16]
          Length = 612

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 235/591 (39%), Positives = 355/591 (60%), Gaps = 37/591 (6%)

Query: 44  NGKVCDLSDPVR--EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE 101
           + K   LSD ++   G+  I   + P +L VIRHSCAH++A+++++++P+ +  +GP++E
Sbjct: 19  SAKALGLSDGIKALNGTEPIYFDDSPLALEVIRHSCAHLLAQSLKALYPDAKFFVGPVVE 78

Query: 102 DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEI 161
           +GFYYDF      S ++L +IE KM+E         K+ L+ E+A E F  K +  K  +
Sbjct: 79  EGFYYDFKTASKISEEDLPKIEAKMKEFAKLKLAITKEVLTREQALERF--KGDELKHAV 136

Query: 162 LESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIY 221
           +  I   +   +Y+QGE+ DLC+GPH+ +T +    FKL K+AGAY  GD N  ML RIY
Sbjct: 137 MSKISG-DKFGVYQQGEFEDLCKGPHLPNT-RFLNHFKLTKLAGAYLGGDENNEMLIRIY 194

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLI 280
           G A+ T++ L  YL+ +EE++KRDHRKL  E+ LF   ++ G+G+  W  KG +      
Sbjct: 195 GIAFATKEGLKDYLFQIEEAKKRDHRKLGVELGLFSFNDEIGAGLPLWLPKGAR------ 248

Query: 281 SYMRRKIKD---------DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
             +R++I+D          YE +  P++L   +W+ SGH+D+Y+ NM+       T  D 
Sbjct: 249 --LRKRIEDLLSKALLLRGYEPVKGPEILKSDVWKISGHYDNYKENMYF------TTIDE 300

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
           + + +KPMNC GH+ V+   L SYR+LP+R  E+G V+R+E SG LHGL+RVR FTQDDA
Sbjct: 301 QEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDA 360

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
           H+FC+ EQ+ +E   I +    I + F F   M +LSTRP K +G D +W+ A N +K  
Sbjct: 361 HIFCSFEQIQSEVSAILDFTHKIMQAFDFSYEM-ELSTRPAKSIGDDKVWEKATNALKEA 419

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
           L       + RI+  +  G GAFYGPK +  + DA+ R WQCGTIQVD NLP RF   + 
Sbjct: 420 L------KEHRIDYKIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDMNLPERFKLAFT 473

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
           N  +    PVMIHRA+ GS ERFI I+ E+F GN P +++P Q  +  I      +A ++
Sbjct: 474 NECNHAEQPVMIHRAILGSFERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHVFALKL 533

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
              LK   + +E   +N+++N K+R    +KIP+I++ G++E     + IR
Sbjct: 534 KEELKKRDIFVEVLDKNDSLNKKVRSAEKQKIPMILVLGNEEMESEILSIR 584


>gi|308177541|ref|YP_003916947.1| threonine--tRNA ligase [Arthrobacter arilaitensis Re117]
 gi|307745004|emb|CBT75976.1| threonine--tRNA ligase [Arthrobacter arilaitensis Re117]
          Length = 671

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 246/636 (38%), Positives = 363/636 (57%), Gaps = 41/636 (6%)

Query: 36  KKAVAVAINGKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           K  V + ++G + DL+  +  G+ +  +T  DP  L V+RHS AH+MA+AVQ + P+ ++
Sbjct: 30  KDVVVMHVDGVLRDLARELEAGTTVTRVTITDPEGLEVLRHSTAHVMAQAVQQLRPDSKL 89

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            IGP I DGFY+DFD E PF+ ++L Q+EK MQ+II ++  F+++ +S E+A+   E   
Sbjct: 90  GIGPYITDGFYFDFDVEDPFTPEDLKQLEKMMQKIINQNQLFVRREVSPEEAKA--EMAN 147

Query: 155 EAYKVEILESIPAKEN-------------VTLY-----RQGE--WFDLCRGPHVRSTGQV 194
           E YK E+L    + +               T+Y     + GE  W DLCRGPH+ +T  +
Sbjct: 148 EPYKCELLAKADSADTSGEGVTVEVAAGETTIYDNVDRKSGETVWKDLCRGPHLPNTKLI 207

Query: 195 KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMD 254
           K  + L + A AYW G      L RIYGTAW T+ +L  Y   L E+E+RDHRKL  E+D
Sbjct: 208 KNAYALTRSAAAYWLGSEKNKQLQRIYGTAWPTKDDLKAYQERLAEAERRDHRKLGAELD 267

Query: 255 LFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWD 312
           LF   ++ GSG+  +H KG  I + +  Y+R R +++ ++ + TP +    L+  SGH  
Sbjct: 268 LFSFPDELGSGLPVFHPKGGIIKREMEDYVRDRHVEEGFQYVGTPHISKDGLFHTSGHLP 327

Query: 313 SYRANMFAVKCAD-------DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEF 365
            Y   MF     D       +  K  + + LK MNCP H  +F    +SYRELP+RL EF
Sbjct: 328 YYADTMFPALHIDEERDEDGNITKQGQEYRLKAMNCPMHNLIFRGRGRSYRELPLRLFEF 387

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
           G VYR E SG +HGL RVRGF+QDD+H + TKEQ   E   + N ++S+ +DFG +   +
Sbjct: 388 GHVYRYEKSGVVHGLTRVRGFSQDDSHSYVTKEQAPAEVEHLLNFMLSLLRDFGMDDFYL 447

Query: 426 KLSTR-PE--KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           +LSTR PE  K +GSD  W++A  +++ V      +++  +      G  AFYGPK    
Sbjct: 448 ELSTRDPESDKFIGSDEQWNEATAVLERV------ATESGVELVADPGGAAFYGPKISVQ 501

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
            KDAIGR WQ GT+Q DFN P+RF   Y  +   +  PVMIH A FGSIERF+G++ E++
Sbjct: 502 AKDAIGRTWQMGTVQYDFNQPARFGLEYQAADGTRQEPVMIHAAKFGSIERFLGVLTEHY 561

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WLSP+Q     +  +  +Y  E+   LK+  + +E D  ++    KIR  S  K
Sbjct: 562 AGAFPAWLSPVQVRAIPVAEAFNDYLGEVVAKLKAAGVRVELDDSSDRFPKKIRNASKDK 621

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           IP ++I G ++A   ++  R    +   +V + DA+
Sbjct: 622 IPFVLIAGGEDADANAVSFRFRDGSQENQVPVDDAV 657


>gi|261837575|gb|ACX97341.1| threonyl-tRNA synthetase [Helicobacter pylori 51]
          Length = 612

 Score =  447 bits (1150), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 236/591 (39%), Positives = 356/591 (60%), Gaps = 37/591 (6%)

Query: 44  NGKVCDLSDPVR--EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE 101
           + KV  LSD V+   G+  I   + P +L VIRHSCAH++A+++++++P+ +  +GP++E
Sbjct: 19  SAKVLGLSDGVKALNGTEPIYFDDSPLALEVIRHSCAHLLAQSLKALYPDAKFFVGPVVE 78

Query: 102 DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEI 161
           +GFYYDF      S ++L +IE KM+E         K+ L+ E+A E F  K +  K  +
Sbjct: 79  EGFYYDFKTASKISEEDLPKIEAKMKEFAKLKLAITKEVLTREQALERF--KGDELKHAV 136

Query: 162 LESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIY 221
           +  I   +   +Y+QGE+ DLC+GPH+ +T +    FKL K+AGAY  GD N  ML RIY
Sbjct: 137 MSKISG-DKFGVYQQGEFEDLCKGPHLPNT-RFLNHFKLTKLAGAYLGGDENNEMLIRIY 194

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLI 280
           G A+ T++ L  YL+ +EE++KRDHRKL  E+ LF   ++ G+G+  W  KG +      
Sbjct: 195 GIAFATKEGLKDYLFQIEEAKKRDHRKLGVELGLFGFDDEIGAGLPLWLPKGAR------ 248

Query: 281 SYMRRKIKD---------DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
             +R++I+D          YE +  P++L   +W+ SGH+D+Y+ NM+       T  D 
Sbjct: 249 --LRKRIEDLLSKALLLRGYEPVKGPEILKSDVWKISGHYDNYKENMYF------TTIDE 300

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
           + + +KPMNC GH+ V+   L SYR+LP+R  E+G V+R+E SG LHGL+RVR FTQDDA
Sbjct: 301 QEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDA 360

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
           H+FC+ EQ+ +E   I +    I + F F   M +LSTRP K +G D +W+ A + +K  
Sbjct: 361 HIFCSFEQIQSEVSAILDFTHKIMQAFDFSYEM-ELSTRPAKSIGDDKVWEKATSALKEA 419

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
           L       + RI+  +  G GAFYGPK +  + DA+ R WQCGTIQVD NLP RF   + 
Sbjct: 420 L------KEHRIDYKIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDMNLPERFKLAFT 473

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
           N  +    PVMIHRA+ GS ERFI I+ E+F GN P +++P Q  +  I      +A ++
Sbjct: 474 NERNHAEQPVMIHRAILGSFERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHVFALKL 533

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
              LK   + +E   +N+++N K+R    +KIP+I++ G++E     + IR
Sbjct: 534 KEALKKCDIFVEVLDKNDSLNKKVRLAEKQKIPMILVLGNEEVESEILSIR 584


>gi|163846770|ref|YP_001634814.1| threonyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|222524584|ref|YP_002569055.1| threonyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
 gi|163668059|gb|ABY34425.1| threonyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|222448463|gb|ACM52729.1| threonyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
          Length = 594

 Score =  447 bits (1150), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 234/596 (39%), Positives = 363/596 (60%), Gaps = 37/596 (6%)

Query: 64  PEDPRS--LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           P DP S     +RHS AH+MA+AV  I+P+ ++AIGP IE+GFYYDFD  +P + ++L++
Sbjct: 2   PVDPNSDPYYRLRHSLAHVMAQAVLEIFPDAKIAIGPPIENGFYYDFDLPRPLTPEDLSE 61

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN----------- 170
           IE++M+ IIA + PF+ + ++ E+AR++F +  + YK+E++E +    +           
Sbjct: 62  IERRMKRIIAGNHPFIYREVTAEEARQIFAN--QPYKLELIEGLAKGLDEYGETHHGDTV 119

Query: 171 VTLYRQGEWFDLCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQ 229
           ++ YRQ  + DLCRGPH+  TG++  + FKLM +AGAYWRGD     L RIYGT WNT++
Sbjct: 120 ISTYRQDTFEDLCRGPHLNHTGEINPEAFKLMSIAGAYWRGDEKNRQLQRIYGTGWNTKE 179

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KI 287
           EL  YL+ LEE+ KRDHR+L +E+ LF  ++D G G+  +  KG  I   +  ++R  + 
Sbjct: 180 ELEAYLHRLEEARKRDHRRLGKELGLFFFSDDIGPGLPIFTPKGEIIRHEMEKFVREVQT 239

Query: 288 KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
           +  Y+ + T  V+ + L+++SGH+D+YR +MF      + +     F LKPMNCP H+ +
Sbjct: 240 RYGYQHVWTGNVVKEQLYRKSGHYDNYRDSMFPPMVESEDL----VFRLKPMNCPSHMTL 295

Query: 348 FNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           +N  G+ SYR+LP+R AEF ++YR E SG+L GL RVR  TQDD H+FC  +Q+  E   
Sbjct: 296 YNQLGVISYRDLPLRFAEFATLYRYEDSGALSGLTRVRALTQDDCHIFCRPDQIQEEFSL 355

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPE--KRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
              +I  +   + F    V+LS R    K V  D  W+ A   ++  L+       + + 
Sbjct: 356 ALQVIREVLGTYQFTDYKVRLSLRGSEGKYVQDDEKWELATAALRSALEA------NGVE 409

Query: 465 TGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIH 524
              + GE AFYGPK +++ +D +GR+WQ  TIQVDF  P+R    Y+    +   PV++H
Sbjct: 410 YFEVEGEAAFYGPKADFLARDVLGREWQLSTIQVDFIQPARLGCEYIGEDDKPHTPVVLH 469

Query: 525 RAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIET 584
           RAV G+ ERF+GI+IE++ G  PLWL+P+QA+V  IT   +E+A+++   L    L +E 
Sbjct: 470 RAVTGTTERFMGILIEHYGGAFPLWLAPVQAVVIPITDKQMEFARQVRQRLFMAGLRVEL 529

Query: 585 DFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
           D   + +  KIR   ++KIP ++I G +E +  S+ +R      T+    L A+P+
Sbjct: 530 DDNRDRMQGKIRRAQLQKIPYMLIIGAREEAADSVAVR------TRAGEDLGAMPV 579


>gi|284052870|ref|ZP_06383080.1| threonyl-tRNA synthetase [Arthrospira platensis str. Paraca]
          Length = 508

 Score =  447 bits (1150), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 224/493 (45%), Positives = 323/493 (65%), Gaps = 20/493 (4%)

Query: 69  SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQE 128
            L  IRH+ +H+MA AVQ ++P+ QV IGP IE+GFYYDFD  +PF+  +L  I+K+M +
Sbjct: 26  QLKRIRHTTSHVMAMAVQKLFPKAQVTIGPWIENGFYYDFDSPEPFTEQDLKAIKKEMVK 85

Query: 129 IIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG-EWFDLCRGPH 187
           I+ R  P +++ +S E+A+   E+  E YK+EIL  +   E +T+Y  G +W+DLC GPH
Sbjct: 86  ILKRKLPVIREEVSREEAQRRIETLGEPYKLEILADL--TEPITIYHLGDQWWDLCAGPH 143

Query: 188 VRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDH 246
           V +TG +  K  +L  VAGAYWRGD  +  L RIYGTAW T ++L +Y    EE+ +RDH
Sbjct: 144 VETTGDINPKAIELESVAGAYWRGDETKAQLQRIYGTAWETPEQLAEYKRRKEEALRRDH 203

Query: 247 RKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHL 304
           R+L +E+ LF  ++  G G+  W  KG  +  TL  +++R +++  Y+ + TP +   +L
Sbjct: 204 RRLGKELGLFIFSDQVGPGLPLWTPKGTILRTTLEDFLKREQVRRGYQPVVTPHLGRVNL 263

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           ++ SGHW  YR ++F +    +       F LK MNCP HV ++   L+SYRELP+RLAE
Sbjct: 264 FKTSGHWQKYREDLFPMMGESED----EGFVLKAMNCPFHVQIYKSSLRSYRELPIRLAE 319

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK-I 423
           FG+VYR E SG L GL RVRGFTQDDAH+F T EQ+ +E LK+ +LI S+ K    ++  
Sbjct: 320 FGTVYRYEQSGELGGLTRVRGFTQDDAHLFVTPEQLDDEFLKVVDLIQSVLKKLKLDQSF 379

Query: 424 MVKLSTR---PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
             +LS R    +K +GSD  W+ AEN ++  ++T+       +N    +GE AFYGPK +
Sbjct: 380 KARLSFRDPNSDKYIGSDQAWEKAENAIRRAVETLG------MNYFEGIGEAAFYGPKLD 433

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           +I++DA+ R+WQ GT+QVD+NLP RF+  YV     +  PVMIHRA FGS+ER IGI+IE
Sbjct: 434 FIVQDALEREWQLGTVQVDYNLPERFDLEYVAEDGTRQRPVMIHRAPFGSLERLIGILIE 493

Query: 541 NFKGNLPLWLSPI 553
            + G+ PLWL+P+
Sbjct: 494 EYTGDFPLWLAPV 506


>gi|317131189|ref|YP_004090503.1| threonyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
 gi|315469168|gb|ADU25772.1| threonyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
          Length = 645

 Score =  447 bits (1150), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 243/645 (37%), Positives = 370/645 (57%), Gaps = 29/645 (4%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SI 59
           MP+   +T  DGSI+     AT   +A+ +   L K   A  I GKV DL   +++G ++
Sbjct: 1   MPN---ITLKDGSIRAVEPGATALALAKELGAGLYKAVCAARIGGKVVDLRTQLQDGDTL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           E++T +DP       H+ +HI+A+AV+ ++PEV++ IGP IEDGFYYDFD +  F+ +EL
Sbjct: 58  ELLTFDDPDGKKAFNHTASHILAQAVKRLYPEVKLTIGPAIEDGFYYDFDSDLSFTQEEL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-ENVTLYRQGE 178
           A+IE +M++I+  D P  +  L   +A +L E K E YKVE++     K E ++ Y+QGE
Sbjct: 118 AKIEAEMKKIVKEDLPIERFTLPAPEAVKLMEEKSEPYKVELINEHAGKGEPISFYKQGE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + +LC GPH+  TG+VK F KL    GAYWRGD+   ML R+YGTA+  + EL  ++  L
Sbjct: 178 FTELCAGPHLPDTGRVKAF-KLTSSTGAYWRGDAKNKMLRRVYGTAFPKKAELDAHITML 236

Query: 239 EESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINT 296
           EE+ KRDH KL RE+  F   +  G G+     KG ++ Q L  ++   + K  Y    T
Sbjct: 237 EEARKRDHNKLGRELGFFTTVDYIGQGLPVMLPKGSRVLQLLQRFVEDEEEKRGYLLTKT 296

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +    L++ SGHWD YR  MF +    D  KD   FAL+PM CP    V+ +  +SYR
Sbjct: 297 PLLAKSDLYKISGHWDHYRDGMFVL---GDEEKDDEVFALRPMTCPFQFQVYLNKKRSYR 353

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM---FNECLKIHNLIIS 413
           +LP+RL E  +++RNE SG +HGL+RVR FT  + H+ C  +Q+   F  C+ + N ++ 
Sbjct: 354 DLPMRLGETSTLFRNEASGEMHGLIRVRQFTISEGHIACRPDQLEEEFKGCVDLANFML- 412

Query: 414 IYKDFGF-EKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
             K  G  E +  + S   E    K +G+   W++ ++ M+ +LD +       I     
Sbjct: 413 --KTVGLDEDVSYRFSKWDENDRDKYIGTSEQWEEVQDRMRNILDDLG------IQYTEA 464

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
            GE AFYGPK +  +++  G++    T+Q+DF L  RF   Y ++  ++ +P +IHR   
Sbjct: 465 SGEAAFYGPKLDIQIRNVFGKEDTLITVQIDFQLAKRFEMKYTDTDGQEKYPYVIHRTSI 524

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRN 588
           G  ER + ++IE + G +P WL+P Q  V  I+     YAQ +   L++  L    D RN
Sbjct: 525 GCYERTLALLIEKYAGAMPTWLAPEQVRVLPISEKHEAYAQPVLEKLRAAGLRATVDQRN 584

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIR-RFGSTTTQKV 632
           E I Y+IRE  ++K+P +++ GD+EA E ++ +R R G   TQ V
Sbjct: 585 EKIGYRIREAQLEKVPYMLVAGDREAEEGTVSVRARVGEGGTQTV 629


>gi|294055076|ref|YP_003548734.1| threonyl-tRNA synthetase [Coraliomargarita akajimensis DSM 45221]
 gi|293614409|gb|ADE54564.1| threonyl-tRNA synthetase [Coraliomargarita akajimensis DSM 45221]
          Length = 612

 Score =  447 bits (1149), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 232/582 (39%), Positives = 350/582 (60%), Gaps = 32/582 (5%)

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           +D   L  +RHSC+H++A AV  + P+ Q+ IGP  ++GFYYD D ++   + +L  IE 
Sbjct: 2   KDMSPLEELRHSCSHVLAAAVLRLHPDTQLDIGPPTDNGFYYDIDLDKKLDASDLEAIEV 61

Query: 125 KMQEIIARDSPFLKQYLSHEKA-RELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           +M++II  +  F +   S E+A  ++ E  +E YK+  L+ IP  E V+ Y+ GE+ DLC
Sbjct: 62  EMKQIIKENQKFTRIECSREEAVAKIKEFGQERYKLGRLDDIPEGEQVSFYQNGEFIDLC 121

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            G HV  T ++K F KL+ +AGAY RGD N   L RIYGTA+ ++ EL  YL  LE+++ 
Sbjct: 122 AGSHVNYTKKIKAF-KLLSIAGAYHRGDENNKQLQRIYGTAFPSKDELADYLDKLEQAKA 180

Query: 244 RDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLD 301
           RDHRKL +E+ LFHI +  GSG++ W   G  +   L +++  ++ K  Y+++ TP +  
Sbjct: 181 RDHRKLGKELKLFHIDDSVGSGLVLWSPNGAVVRTELQNFIADELQKSGYDQVFTPHIGK 240

Query: 302 QHLWQQSGHWDSYRANMF---------------AVKCADDTIK----DLRTFALKPMNCP 342
             L++ SGH+  Y+ + F                  CAD + K    ++  + LKPMNCP
Sbjct: 241 LGLYRTSGHFPYYKESQFPPIVEPGTVEELAHEGCSCADLSNKLDSGEIDGYLLKPMNCP 300

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN 402
            H+ +F+    SYR+LPVRLAEFG+VYR E SG L+G+ RVRGFTQDDAH+FCT++Q+  
Sbjct: 301 MHIKIFDSQPHSYRDLPVRLAEFGTVYRWEQSGELNGMTRVRGFTQDDAHLFCTEDQIAE 360

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTR---PEKRVGSDALWDDAENIMKGVLDTIKNSS 459
           E     +L+  ++   G  +  V++  R     K VG  A WD AE+ ++    T+    
Sbjct: 361 EIAGCLDLVKLVFNTLGMTEYRVRIGLRDPDASKYVGDPAKWDAAEDALRSAAQTLG--- 417

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
              ++     GE AFYGPK ++++KD IGR+WQ GT+QVD+NLP RF+  Y+ + +EK  
Sbjct: 418 ---VDYTEEPGEAAFYGPKIDFVVKDVIGREWQLGTVQVDYNLPERFDLNYIGADNEKHR 474

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH 579
           PVM+HRA FGS+ERF G++IE+F GN P WL+P Q  +  +    V  A+EI  L K+  
Sbjct: 475 PVMLHRAPFGSMERFCGVLIEHFAGNFPTWLAPEQVRILPMNDDLVPQAREIEKLFKAAK 534

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
           + +  D   + +  KIR+  + K+P  ++ G KEA +  I +
Sbjct: 535 IRVTVDAIADKLGAKIRKCHVDKVPHFLVLGRKEAEDGLIKV 576


>gi|312384017|gb|EFR28854.1| hypothetical protein AND_02684 [Anopheles darlingi]
          Length = 766

 Score =  447 bits (1149), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 246/644 (38%), Positives = 372/644 (57%), Gaps = 22/644 (3%)

Query: 5   IKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           IK+T PDG  ++      T  DVA+ IS+ LA   V   +N ++ DL  P+  +  ++++
Sbjct: 36  IKVTLPDGKEVEGLCWQTTPYDVAKGISQGLADNTVIARVNNELWDLDRPLEADCKLQLL 95

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQ 121
             +DP + AV  HS AHI+ EA++  +    +  GP I++GFYYD F +    S+ +   
Sbjct: 96  KFDDPEAQAVFWHSSAHILGEAMEKRYGG-HLCYGPPIDNGFYYDMFLEGSGISNQDYGV 154

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +E +++ I+    PF +  +       +FE  +  +KV IL      E  T+YR G   D
Sbjct: 155 LESEVKRIVKEKQPFERLEMKKSDLLRMFEYNQ--FKVRILNEKVTTETTTVYRCGPLID 212

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHVR+TG+VK   K++K +  YW G ++   L R+YG ++   ++L ++    EE+
Sbjct: 213 LCRGPHVRNTGKVKAL-KVVKNSSTYWEGKADAETLQRVYGISFPDPKQLKEWERIQEEA 271

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVL 300
            KRDHRKL RE +LF   E   G  F+  KG  I+ TL++++R +  K  ++E+ +P + 
Sbjct: 272 AKRDHRKLGREQELFFFHELSPGSCFFQPKGAFIYNTLMNFIRAEYRKRGFQEVISPNIY 331

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  LWQ SGHW  Y  NMF+ +   +T      FALKPMNCPGH  +F+H  +S+RELP+
Sbjct: 332 NAKLWQTSGHWQHYAENMFSFESEKET------FALKPMNCPGHCLIFDHRNRSWRELPL 385

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+A+FG ++RNE SG+L GL RVR F QDDAH+FC  +Q+  E     + +  +Y  FGF
Sbjct: 386 RMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCMPDQIREEITGCLDFLRHVYTVFGF 445

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
              +V LSTRPEK +G   +W++AE  +   LD      ++        G+GAFYGPK +
Sbjct: 446 TFNLV-LSTRPEKYLGEIEVWNEAEKALAESLDKFGEPWKENP------GDGAFYGPKID 498

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
             + DA+ R  QC TIQ+DF LP RFN  YV+   EK  PV+IHRAV GS+ER I I+ E
Sbjct: 499 ITIMDALKRHHQCATIQLDFQLPIRFNLNYVDDSGEKKRPVIIHRAVLGSVERMIAILTE 558

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF-RNETINYKIREHS 599
           N+ G  P WLSP Q +V  +  +  EYA ++   L     ++E D    +T+N KIR   
Sbjct: 559 NYAGKWPFWLSPRQVMVVPVGPAYDEYADKVRLRLHDAGFTVEADLDAGDTMNKKIRNAQ 618

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           + +   I++ G+KE S  ++ +R   +    +V++ + +  L K
Sbjct: 619 LAQFNFILVVGEKERSSETVNVRTRDNKVHGEVTVDELVTKLAK 662


>gi|218515175|ref|ZP_03512015.1| threonyl-tRNA synthetase [Rhizobium etli 8C-3]
          Length = 328

 Score =  446 bits (1148), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 202/316 (63%), Positives = 250/316 (79%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIE 60
           M   I LTFPDGS+++FP  ATG DVAESIS+SLAK AVA+AI+G V DLSD V +G IE
Sbjct: 1   MSQAISLTFPDGSVRSFPAGATGKDVAESISKSLAKSAVAIAIDGAVRDLSDAVTDGKIE 60

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           IIT +D R+L +IRH  AH+MAEAVQ +WP  QV IGP+IE+GFYYDF K +PF+ D+L 
Sbjct: 61  IITRKDGRALELIRHDAAHVMAEAVQELWPGTQVTIGPVIENGFYYDFAKNEPFTPDDLP 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IEKKM+EIIAR++PF KQ  S EKA+E+F +K E YKVE++++IP  +++ +Y QG+WF
Sbjct: 121 KIEKKMKEIIARNAPFTKQIWSREKAKEVFAAKGEQYKVELVDAIPEGQDLKIYHQGDWF 180

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ STGQV   FKLMKVAGAYWRGDSN  MLS IYGTAW  Q +L  YL+ L E
Sbjct: 181 DLCRGPHMASTGQVGTAFKLMKVAGAYWRGDSNNAMLSHIYGTAWADQADLDNYLHMLAE 240

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVL 300
           +EKRDHRKL REMDL H  E+G GV+FWH KGW+IFQTL++YMRR++  DY+E+N PQVL
Sbjct: 241 AEKRDHRKLGREMDLLHFQEEGPGVVFWHGKGWRIFQTLVAYMRRRLAADYQEVNAPQVL 300

Query: 301 DQHLWQQSGHWDSYRA 316
           D  LW+ SGHW  Y+ 
Sbjct: 301 DTSLWETSGHWGWYQG 316


>gi|261838989|gb|ACX98754.1| threonyl-tRNA synthetase [Helicobacter pylori 52]
          Length = 612

 Score =  446 bits (1148), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 235/591 (39%), Positives = 355/591 (60%), Gaps = 37/591 (6%)

Query: 44  NGKVCDLSDPVR--EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE 101
           + K   LSD V+   G+  I   + P +L VIRHSCAH++A+++++++P+ +  +GP++E
Sbjct: 19  SAKALGLSDGVKALNGTEPIYFDDSPLALEVIRHSCAHLLAQSLKALYPDAKFFVGPVVE 78

Query: 102 DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEI 161
           +GFYYDF      S ++L +IE KM+E         K+ L+ E+A E F  K +  K  +
Sbjct: 79  EGFYYDFKTASKISEEDLPKIEAKMKEFAKLKLAITKEVLTREQALERF--KGDELKHAV 136

Query: 162 LESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIY 221
           +  I   +   +Y+QGE+ DLC+GPH+ +T +    FKL K+AGAY  GD N  ML RIY
Sbjct: 137 MSKISG-DAFGVYQQGEFEDLCKGPHLPNT-RFLNHFKLTKLAGAYLGGDENNEMLIRIY 194

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLI 280
           G A+ T++ L  YL+ +EE++KRDHRKL  E+ LF   ++ G+G+  W  KG +      
Sbjct: 195 GIAFATKEGLKDYLFQIEEAKKRDHRKLGVELGLFSFDDEIGAGLPLWLPKGAR------ 248

Query: 281 SYMRRKIKD---------DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
             +R++I+D          YE +  P++L   +W+ SGH+D+Y+ NM+       T  D 
Sbjct: 249 --LRKRIEDLLSKALLLRGYEPVKGPEILKSDVWKISGHYDNYKENMYF------TTIDE 300

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
           + + +KPMNC GH+ V+   L SYR+LP+R  E+G V+R+E SG LHGL+RVR FTQDDA
Sbjct: 301 QEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDA 360

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
           H+FC+ EQ+ +E   I +    I + F F   M +LSTRP K +G D +W+ A + +K  
Sbjct: 361 HIFCSFEQIQSEVSAILDFTHKIMQAFDFSYEM-ELSTRPAKSIGDDKVWEKATSALKEA 419

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
           L       + RI   +  G GAFYGPK +  + DA+ R WQCGTIQVD NLP RF   + 
Sbjct: 420 L------KEHRIGYKIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDMNLPERFKLAFT 473

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
           N  +    PVMIHRA+ GS ERFI I+ E+F GN P +++P Q  +  I      +A ++
Sbjct: 474 NERNHAEQPVMIHRAILGSFERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHAFALKL 533

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
             +LK   + +E   +N+++N K+R    +KIP+I++ G++E     + IR
Sbjct: 534 KEVLKKCDIFVEVLDKNDSLNKKVRLAEKQKIPMILVLGNEEVETEILSIR 584


>gi|300934571|ref|ZP_07149827.1| threonyl-tRNA synthetase [Corynebacterium resistens DSM 45100]
          Length = 706

 Score =  446 bits (1147), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 239/634 (37%), Positives = 353/634 (55%), Gaps = 48/634 (7%)

Query: 45  GKVCDLS-DPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG 103
           G + DLS  P  +  +  +  +      VIRHS AH++A+AVQ  +P  ++ IGP IE+G
Sbjct: 66  GNLRDLSWAPNHDTDVTAVPADTEEGRGVIRHSAAHVLAQAVQKEFPGTKLGIGPAIENG 125

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPF-LKQYLSHEKARELFESKKEAYKVEIL 162
           FYYDFD  +PF+ ++L +IEK M++II     F  K Y S ++AR   E   E +K E++
Sbjct: 126 FYYDFDVAEPFTPEDLNKIEKTMKKIIKSGQKFERKAYASVDEARA--EYTHEPFKTELI 183

Query: 163 ESI----PAKENVTLYRQGE---------------WFDLCRGPHVRSTGQVKKFFKLMKV 203
           +      P  +  T    GE               W+DLCRGPHV +T  +  F  + + 
Sbjct: 184 DDKGNVDPDSDEATEVGSGELTAYSNVNPRTGDVEWYDLCRGPHVPTTRYIPAF-AITRS 242

Query: 204 AGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-G 262
           + AYWRGD ++  L RIYGTAW +++ L  Y   L E+EKRDHR+L  E+DLF   ++ G
Sbjct: 243 SAAYWRGDQSKAGLQRIYGTAWESKEALESYQEMLAEAEKRDHRRLGAELDLFSFPDEIG 302

Query: 263 SGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA- 320
           SG   +H  G  +   +  + RR+ I+  Y  +NTP +    L+Q+SGH D Y   MF  
Sbjct: 303 SGFPVFHPNGGIVRLEMEEHSRRRHIESGYSFVNTPHITKGDLFQKSGHLDFYAEGMFPP 362

Query: 321 ------VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
                 V    +  K  + +  KPMNCP H  +F    +SYRELP+RL EFG+VYR E S
Sbjct: 363 MQLDGEVDAEGNVTKQAQDYYAKPMNCPMHNLIFASRGRSYRELPLRLFEFGTVYRYEKS 422

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR-PEK 433
           G +HGL R RGFTQDDAH++CT++Q+  E   +   IIS+ +D+G +   ++LST+ P K
Sbjct: 423 GVIHGLTRARGFTQDDAHIYCTEDQLEQELTTVLEFIISLLRDYGLDDFYLELSTKDPNK 482

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL----GEGAFYGPKFEYILKDAIGR 489
            VGSD +W+ +  I++ V            N+G+ L       AFYGPK     +DAIGR
Sbjct: 483 FVGSDEIWERSTEILQRVA----------TNSGLELVPDPAGAAFYGPKISVQARDAIGR 532

Query: 490 DWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW 549
            WQ  T+Q+DFNLP RFN  Y      K  P+MIHRA+FGSIERF G+++E++ G  P W
Sbjct: 533 TWQMSTVQLDFNLPERFNLEYTAPDGSKQRPIMIHRALFGSIERFFGVLLEHYAGAFPAW 592

Query: 550 LSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIIC 609
           L+P Q +   +     EY   +A+ L+   +  E D  ++ +  KIR H+  K+P +++ 
Sbjct: 593 LAPHQVVGIPVADEFNEYLDSVASDLRKRGIRAEVDTSDDRMQKKIRTHTTGKVPFMLLV 652

Query: 610 GDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           G ++    ++  R    +    V    A+ ++ +
Sbjct: 653 GGRDVEADAVSFRFLDGSQVNGVPRDRAVELIAQ 686


>gi|328866339|gb|EGG14724.1| threonyl-tRNA synthetase [Dictyostelium fasciculatum]
          Length = 706

 Score =  446 bits (1147), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 241/639 (37%), Positives = 369/639 (57%), Gaps = 23/639 (3%)

Query: 5   IKLTFPDGSI-KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           I +T PDG +   F    T  DVA+SISR LA   V+  +N +V D+S P+  + ++ + 
Sbjct: 74  ISITLPDGKVVPGFKGKTTPYDVAKSISRGLADSIVSSIVNDQVHDISRPLEGDCNLSLC 133

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF-DKEQPFSSDELAQ 121
             +         HS AH++ +A++ ++   Q+ IGP  +DGFYYD    ++  SS++   
Sbjct: 134 KFDSEAGKKTFWHSSAHVLGQALELVYGG-QLCIGPATQDGFYYDMATGDKLVSSEDYEI 192

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           I++ + +I+A   PF +  +  + A E+F+  K  YK EI+  IPA++ V+LYR G   D
Sbjct: 193 IQEVVNKIVAEKQPFERLAVPRDLALEMFKYNK--YKTEIISKIPAEDTVSLYRCGTLVD 250

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ +T  +K F K++K + AYW G +    L R+YG A+  ++++ +Y  F+EE+
Sbjct: 251 LCRGPHLPNTSYIKAF-KVVKNSSAYWLGKAENDPLQRVYGIAFPDKKQMEEYNKFMEEA 309

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVL 300
            KRDHR + +  +LF       G  F+   G +I+  L+ ++R +  +  + E+ TP + 
Sbjct: 310 AKRDHRNVGKAQELFFFHPYSPGCTFFLPHGTRIYNKLVEFIRFEYHRRGFSEVITPTMF 369

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            Q LW+QSGHW  Y  NMF VKC      D   +++KPMNCPGH  +F    +SYRELP+
Sbjct: 370 SQSLWEQSGHWAKYSENMFPVKC------DNSNYSMKPMNCPGHCLMFASRSRSYRELPI 423

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R A+FG ++RNE +G+L GL RVR F QDDAH+FCT  Q   E       +  +Y  FGF
Sbjct: 424 RFADFGVLHRNEMAGALTGLTRVRKFQQDDAHIFCTLAQTETEIKSCLEFMQHVYGIFGF 483

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           E   ++LSTRPE R+GSD +WD AE  ++  L         ++N     G+GAFYGPK +
Sbjct: 484 E-FSLELSTRPENRLGSDEMWDKAEKSLEVALTNFGKPW--KLNP----GDGAFYGPKID 536

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH-PVMIHRAVFGSIERFIGIMI 539
             + D + R  QC TIQ+DF LP RF   Y+   +E    PV+IHRA+ GS+ER + I+I
Sbjct: 537 IHITDVLKRSHQCATIQLDFQLPIRFELEYMTDKAEDLQRPVIIHRAILGSVERMMAILI 596

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E+  G  P W+SP QAI+  ++    EYA ++   +       + D  ++T+  K+RE  
Sbjct: 597 EHTGGKWPFWVSPRQAIIVPVSQQFNEYADQLQKKIVDAGFYCDVDGSDKTLPKKVREAQ 656

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           + +   I++ G KE  E ++G+R   +     +S LDA+
Sbjct: 657 LAQYNYILVVGQKEKDENTVGVRTRDNVVRDAIS-LDAL 694


>gi|160946146|ref|ZP_02093357.1| hypothetical protein PEPMIC_00108 [Parvimonas micra ATCC 33270]
 gi|158447669|gb|EDP24664.1| hypothetical protein PEPMIC_00108 [Parvimonas micra ATCC 33270]
          Length = 648

 Score =  446 bits (1147), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 228/630 (36%), Positives = 369/630 (58%), Gaps = 20/630 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCD-LSDPVREG-SIEII 62
           IK+TFPDGS+  F       DVA SIS   A+  +   +N  +   LS+ ++E  +++ +
Sbjct: 4   IKVTFPDGSVHEFEKGVKILDVAISISEGFARNVIGAVVNDDIIKGLSETLKEDCTVKFV 63

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
             ED     +  H+ +H+MA A+Q ++P+ +  IGP IE+GFYYD D E  F+ ++L +I
Sbjct: 64  KFEDKEGKEIFWHTSSHVMALAIQRLFPDTKFGIGPAIENGFYYDLDSEHKFTPEDLEKI 123

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M++I+       ++ +  + A + F  K + YK++++E       ++ Y  GE+ DL
Sbjct: 124 EAEMKKIVKEGYSVDRKEVDRDFALKYFAEKGQDYKIDLIEGFDKDAELSFYELGEFTDL 183

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+    ++K   KL+ +AGAYWRG     ML RIYG  +  +++L +YL FLE+++
Sbjct: 184 CRGPHLVDVKKIKA-VKLLSIAGAYWRGSEKNKMLQRIYGITFEKKKDLDEYLEFLEDAK 242

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVL 300
           +RDHRK+ +E+ +F I+++ G+G+ FW  KG  I + +  Y+  ++I+  YE + TP + 
Sbjct: 243 QRDHRKIGKELGIFMISQNVGAGLPFWLPKGATIRRVVERYIVDKEIECGYEHVYTPILA 302

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  L++ SGHWD Y+ +MF        + +     L+PMNCP H+ ++N+ + SY+E P+
Sbjct: 303 NVDLYKTSGHWDHYQDSMFPPM----DLGNGELLVLRPMNCPHHMEIYNNDVHSYKEFPI 358

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G ++R E SG+L GL RVR  T +DAH+F   +Q+  E  ++ NL+ S+Y+DF  
Sbjct: 359 RIAELGMMHRYEMSGTLSGLQRVREMTLNDAHIFVRPDQIKEEFTRVVNLMKSVYEDFDI 418

Query: 421 EKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           +    +LS R     EK    D +W++AE ++K  +D +     +        GE AFYG
Sbjct: 419 KNFRFRLSYRDPENKEKYFDDDEMWNNAEAMLKSAMDDLGYEYFE------AKGEAAFYG 472

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH-PVMIHRAVFGSIERFI 535
           PK +  +K AIG +    TIQ+DF LP RF+  YV    +  H PV+IHR +  ++ERF+
Sbjct: 473 PKLDVQVKTAIGLEETLSTIQLDFLLPERFDLTYVGEDGKNTHRPVVIHRGIVSTMERFV 532

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
             +IE +KG  P WL+P Q  +  I+    +YA E+        + +  D R E I  KI
Sbjct: 533 AYLIEEYKGAFPTWLAPEQVKILPISDKFNDYAYELQKEFAKKDIRVAVDDRTEKIGLKI 592

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFG 625
           RE  + KIP  +I G+ E +ER++ +R+ G
Sbjct: 593 REAQLAKIPYSLIVGENEVNERTVSVRKRG 622


>gi|254517592|ref|ZP_05129648.1| threonyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
 gi|226911341|gb|EEH96542.1| threonyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
          Length = 645

 Score =  446 bits (1147), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 253/648 (39%), Positives = 374/648 (57%), Gaps = 34/648 (5%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           IK+T  DGS+K F    +  D+A+SIS  LA+ A    +NGKV DL   V E S + I T
Sbjct: 2   IKITLKDGSVKEFEAGISVLDIAKSISEGLARNACCGIVNGKVVDLRYIVNEDSELAICT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +       +RHS +H++A AV+ ++P  ++AIGP I DGFYYDFD E  FSSD+L +IE
Sbjct: 62  FDSQEGKDALRHSVSHVLAYAVKRLYPNAKLAIGPAINDGFYYDFDVENSFSSDDLVKIE 121

Query: 124 KKMQEIIARDSPFLKQY-LSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
            +M++I+ +++P ++++ L   +A +L E   E YKVE++  +   E ++ Y+ G++ DL
Sbjct: 122 DEMRKIV-KENPSIERFELPRAEAIKLMEDANEPYKVELINDLGEDEVISFYKMGDFVDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPH+ S   VK   KL++ AGAYW+GD    MLSR+YGTA+  + +L  +L  LEE++
Sbjct: 181 CAGPHLMSLKPVKAI-KLLRSAGAYWKGDEKNKMLSRVYGTAFLKKADLDAHLEALEEAK 239

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKDDYEE-----INT 296
           KRDH KL RE+ +F   E  G G+     KG KI Q L    +R ++D+ E+       T
Sbjct: 240 KRDHNKLGRELKIFTTDEKVGQGLPLIMPKGAKIVQLL----QRWVEDEEEKRGYVFTKT 295

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +    L++ SGHWD Y+  MF +   D   KD    AL+PM CP    ++N    SYR
Sbjct: 296 PSMSKNDLFKVSGHWDHYKDGMFVLGDED---KDPEVMALRPMTCPFQYTIYNAEQHSYR 352

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM---FNECLKIHNLIIS 413
           ELP+R AE  ++YRNE SG +HGL+RVR FT  D H+ C  +Q+   F  C+++ N I+S
Sbjct: 353 ELPIRYAETSTLYRNEASGEMHGLIRVRQFTLSDGHIVCRPDQIEEEFKGCVELINHIMS 412

Query: 414 IYKDFGFEKIMVKLS----TRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL 469
                G   I  + S       +K + +   W++ + +MK +LD +       I+     
Sbjct: 413 TLGIDG--DISFRFSKWDPNNTDKYINNPEAWEETQVLMKAILDHLG------IDYVEAE 464

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG 529
           GE AFYGPK +   K+  G++    TIQ+DF L  RF+  Y++    K  P +IHR+  G
Sbjct: 465 GEAAFYGPKLDIQFKNVHGKEDTIITIQIDFALAERFDMTYIDKDGNKKRPYIIHRSSIG 524

Query: 530 SIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE 589
             ER + ++IE + G  P WL+P QAIV  I+    +YA+ I    K   + I  D+R+E
Sbjct: 525 CYERTLAMLIEKYAGAFPTWLAPTQAIVLPISDKYNDYAESIVKDFKDSGIRITADYRSE 584

Query: 590 TINYKIREHSIKKIPIIIICGDKEAS--ERSIGIRRFGSTTTQKVSLL 635
            I YKIRE  +++IP I++ G+KEA+  E S+  R+ G      VS L
Sbjct: 585 KIGYKIREARLERIPYILVVGEKEAANNEASVRSRKNGEEGALPVSEL 632


>gi|225155152|ref|ZP_03723647.1| threonyl-tRNA synthetase [Opitutaceae bacterium TAV2]
 gi|224804099|gb|EEG22327.1| threonyl-tRNA synthetase [Opitutaceae bacterium TAV2]
          Length = 646

 Score =  446 bits (1147), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 237/606 (39%), Positives = 345/606 (56%), Gaps = 60/606 (9%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           L  IRHS +HI+A A+  ++PE ++ IGP  + GFYYD D +  F+ ++LA+IE +M+++
Sbjct: 6   LEEIRHSSSHILATAILRLFPEAKLDIGPPTDSGFYYDIDLDHKFTLEDLARIEAEMKKV 65

Query: 130 IARDSPFLKQYLSHEKARELF-ESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           I  + PF +   + E+A  +  E  +E YK+  L  IPA E ++ Y+ GE+ DLC G HV
Sbjct: 66  IDENQPFRRFETTREEAERIIRERGQERYKLGRLADIPAGEAISFYQNGEFIDLCAGTHV 125

Query: 189 RSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRK 248
           R T QVK F KL+ +AGAY RGD     L RIYGTA+ ++ EL Q+L   E+++ RDHRK
Sbjct: 126 RYTKQVKAF-KLLSIAGAYHRGDEKNKQLQRIYGTAFASKDELAQFLERQEQAKLRDHRK 184

Query: 249 LAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQ 306
           L R++ LFHI ED G G+I W   G  + Q L +++  ++ K  Y ++ TP +    L++
Sbjct: 185 LGRDLKLFHIDEDVGQGLILWTPAGSVVRQELQNFISEELRKQGYSQVFTPHIGKLALYK 244

Query: 307 QSGHWDSYRANMF---------------AVKCAD-------------------------- 325
            SGH+  Y+   F                  CAD                          
Sbjct: 245 TSGHFPYYKDAQFPAIIEPDQLAQISAAGCSCADMTARLEAVSPAFAAQLNERTGTAMIG 304

Query: 326 ------DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHG 379
                 D    L  F LKPMNCP H+ +F     SYR+LPVRLAEFG+VYR E SG L+G
Sbjct: 305 ADRINPDPTALLDGFLLKPMNCPHHIKIFASQPHSYRDLPVRLAEFGTVYRWEQSGELNG 364

Query: 380 LMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR---PEKRVG 436
           + RVRGFTQDDAH+FCT+EQ+  E     +L+ ++    G     V++  R     K  G
Sbjct: 365 MTRVRGFTQDDAHLFCTEEQIAQEIQGCLSLVKTVLSTLGMADYRVRVGLRDPDSNKYTG 424

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
           +   WD AEN  +    T+     +        GE AFYGPK ++++KD IGR+WQ GT+
Sbjct: 425 AAENWDKAENACRTAAQTLGVPFTEEP------GEAAFYGPKIDFVIKDVIGREWQLGTV 478

Query: 497 QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI 556
           QVD+NLP RF+  Y+ + ++   PVMIHRA FGS+ERF G++IE+F G+ P+WL+P Q  
Sbjct: 479 QVDYNLPVRFDLSYIGADNQPHRPVMIHRAPFGSMERFCGVLIEHFAGDFPVWLAPEQVR 538

Query: 557 VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASE 616
           +  I+     Y++++ N L+   + +  D  ++ I  K+R   + KIP +I+ G KEA  
Sbjct: 539 ILPISDKVAAYSEKLYNELREAGVRVVLDSDSDKIGAKLRRAELSKIPYMIVAGQKEAEA 598

Query: 617 RSIGIR 622
            +I +R
Sbjct: 599 EAISVR 604


>gi|257055522|ref|YP_003133354.1| threonyl-tRNA synthetase [Saccharomonospora viridis DSM 43017]
 gi|256585394|gb|ACU96527.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase
           [Saccharomonospora viridis DSM 43017]
          Length = 692

 Score =  446 bits (1146), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 244/612 (39%), Positives = 356/612 (58%), Gaps = 52/612 (8%)

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           ED RS  VIRHS AH++A+AVQ  +PE ++ IGP I+DGFYYDF  ++PF+ ++L  +EK
Sbjct: 71  EDGRS--VIRHSAAHVLAQAVQQQFPEAKLGIGPPIKDGFYYDFAVDRPFTPEDLQALEK 128

Query: 125 KMQEIIARDSPFLKQYL-SHEKARELFESKKEAYKVEILE--------SIPAKE------ 169
           +M++II     F ++ + S E A+E  E   E +K+E+++        ++   E      
Sbjct: 129 RMKQIIKGAQQFSRRVVESVEAAKE--ELADEPFKLELVDLKSEQGADAVDTSEVMEVGA 186

Query: 170 -NVTLY-------RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIY 221
             +T+Y       ++  W DLCRGPHV +T  +  F KL +VA AYWRGD   P L RIY
Sbjct: 187 GELTIYDNLDPRTKERVWSDLCRGPHVPTTKYIPAF-KLTRVAAAYWRGDERNPQLQRIY 245

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLI 280
           GTAW +Q+    YL  L E+E+RDHRKL  E+DLF   E+ GSG+  +H KG  + + L 
Sbjct: 246 GTAWESQEAQDAYLEMLAEAERRDHRKLGAELDLFSFPEEIGSGLPVFHPKGGVVRKVLE 305

Query: 281 SYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT------ 333
            Y RR+ ++  YE +NTP +    L++ SGH   YR  M+     D    D  T      
Sbjct: 306 DYSRRRHEEAGYEFVNTPHITKAQLFETSGHLHWYREGMYPGMHLDAEYNDDGTVRKPGQ 365

Query: 334 -FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
            + LKPMNCP H  ++    +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDDAH
Sbjct: 366 DYFLKPMNCPMHNLIYRSRGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDAH 425

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR-PEKRVGSDALWDDAENIMKGV 451
           ++CT +QM +E   +   ++ + +D+G +   ++LSTR PEK +GSD  W+ A + ++  
Sbjct: 426 IYCTVDQMHDEIKSLLQFVLDLLRDYGLDDFYLELSTRDPEKSIGSDEDWERATDALRSA 485

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
            +    S  D +   +  G  AFY PK     KDAIGR WQ  TIQVD   P  F   Y 
Sbjct: 486 AEA---SGLDLV---LDPGGAAFYAPKISVQAKDAIGRSWQMSTIQVDLMEPELFGLEYQ 539

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
            S   K  PVMIHRA+FGSIERF G++ E++ G  P WL+P+Q +   I  + VE+ + +
Sbjct: 540 ASDGSKQQPVMIHRALFGSIERFFGVLTEHYAGAFPAWLAPVQVVGIPIADAHVEHLRGV 599

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR-RFGSTTTQ 630
              L+   + +E D  ++ +  KIR H+ +K+P +++ G ++    ++  R R GS    
Sbjct: 600 EKALRDRGIRVELDTSDDRMQKKIRTHTTQKVPFLLLAGGRDVEAGAVSFRFRDGSQ--- 656

Query: 631 KVSLLDAIPILT 642
               ++ +P+ T
Sbjct: 657 ----INGVPVAT 664


>gi|164657235|ref|XP_001729744.1| hypothetical protein MGL_3288 [Malassezia globosa CBS 7966]
 gi|159103637|gb|EDP42530.1| hypothetical protein MGL_3288 [Malassezia globosa CBS 7966]
          Length = 635

 Score =  446 bits (1146), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 236/613 (38%), Positives = 360/613 (58%), Gaps = 33/613 (5%)

Query: 25  DVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAE 83
           D+A++IS+SL+++ V   +NG + DL  P+  + ++E++  E P    V  HS AH++ E
Sbjct: 2   DIAKAISKSLSERVVISKVNGILWDLERPLEGDATLELLDFEHPEGKRVFWHSSAHVLGE 61

Query: 84  AVQSIWPEVQVAIGPIIEDGFYYDF----DKEQPFSSDELAQIEKKMQEIIARDSPFLKQ 139
           A +  +    + IGP  ++GFYY+       ++P  S++   +EK +   +    PF + 
Sbjct: 62  AAERHYG-CHLCIGPPTDEGFYYEMGMGDSGDRPVKSEDFEPLEKLIGMAVKDKQPFERA 120

Query: 140 YLSHEKARELFESKKEAYKVEILES-IPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFF 198
            L+ E+  E+F+  K  YKV I+ S IP   + T+YR G   DLC GPH+  TG++K   
Sbjct: 121 VLTKEQLLEMFKYNK--YKVHIINSKIPDGTSTTVYRCGPMIDLCVGPHIPHTGRIKAM- 177

Query: 199 KLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI 258
            ++K + +Y+ GD     L R+YG ++  ++++T+Y +FL E+ KRDHR++ RE +LF  
Sbjct: 178 TVLKNSASYFLGDQKNDSLQRLYGISFPDKKQMTEYKHFLAEAAKRDHRRIGREQELFMF 237

Query: 259 AEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRAN 317
            +   G  FW   G +I+ TL  +++ +  K  ++E+ +P + +  LW+ SGHW +Y+ +
Sbjct: 238 HDLSPGSCFWLPHGARIYNTLQDFIKSEYRKRGFDEVISPNMYNSKLWETSGHWANYKDD 297

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           MF +        D  TFALKPMNCPGH  +F    +SY+ELP+R A+FG ++RNE SG+L
Sbjct: 298 MFVLSV------DKETFALKPMNCPGHCLMFASRDRSYKELPLRFADFGVIHRNEASGAL 351

Query: 378 HGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGS 437
            GL RVR F QDDAH+FC   Q+ +E +   + + ++Y  FGF    ++LSTRPEK +G 
Sbjct: 352 SGLTRVRRFVQDDAHIFCRASQIEDEMINCFDFLQTVYGHFGF-SFKMELSTRPEKHLGD 410

Query: 438 DALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ 497
              WD AE  +   LD       + +N     G+GAFYGPK +  + DA+ R+ QC TIQ
Sbjct: 411 VETWDAAEKRLASALDRFVPGRWE-LNP----GDGAFYGPKIDITISDAMRREHQCATIQ 465

Query: 498 VDFNLPSRFNAFY--------VNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW 549
           +DF LP RFN  Y         + H+E+  PVMIHRAV GS+ERFI I+IENF G  P W
Sbjct: 466 LDFQLPQRFNLEYKTPQGGAEADKHTER--PVMIHRAVVGSLERFIAILIENFAGKWPFW 523

Query: 550 LSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIIC 609
           LSP Q +V  +T S  EYA+E+  LL       + D  + T+N KIR   + +   + + 
Sbjct: 524 LSPRQVLVVPVTQSVYEYAEEVRALLWDRGFFADADLSDNTLNKKIRNGELAQYNFVFVV 583

Query: 610 GDKEASERSIGIR 622
           G +E   RS+ +R
Sbjct: 584 GHEEKETRSVNVR 596


>gi|208434081|ref|YP_002265747.1| threonyl-tRNA synthetase [Helicobacter pylori G27]
 gi|238065115|sp|B5Z9Q1|SYT_HELPG RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|208432010|gb|ACI26881.1| threonyl-tRNA synthetase [Helicobacter pylori G27]
          Length = 612

 Score =  446 bits (1146), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 234/591 (39%), Positives = 357/591 (60%), Gaps = 37/591 (6%)

Query: 44  NGKVCDLSDPVR--EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE 101
           + KV  LSD ++  +G+  I   + P +L VIRHSCAH++A+++++++P+ +  +GP++E
Sbjct: 19  SAKVLGLSDGIKALKGTEPIYFDDSPLALEVIRHSCAHLLAQSLKALYPDAKFFVGPVVE 78

Query: 102 DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEI 161
           +GFYYDF      S ++L +IE KM+E         K+ L+ E+A E F  K +  K  +
Sbjct: 79  EGFYYDFKTASKISEEDLPKIEAKMKEFAKLKLAITKEVLTREQALERF--KGDELKHAV 136

Query: 162 LESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIY 221
           +  I   +   +Y+QGE+ DLC+GPH+ +T +    FKL K+AGAY  GD +  ML RIY
Sbjct: 137 MSKISG-DAFGVYQQGEFEDLCKGPHLPNT-RFLNHFKLTKLAGAYLGGDESNEMLIRIY 194

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLI 280
           G A+ T++ L  YL+ +EE++KRDHRKL  E+ LF   ++ G+G+  W  KG +      
Sbjct: 195 GIAFATKEGLKDYLFQIEEAKKRDHRKLGVELGLFSFDDEIGAGLPLWLPKGAR------ 248

Query: 281 SYMRRKIKD---------DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
             +R++I+D          YE +  P++L   +W+ SGH+D+Y+ NM+       T  D 
Sbjct: 249 --LRKRIEDLLSKALLLRGYEPVKGPEILKSDVWKISGHYDNYKENMYF------TTIDE 300

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
           + + +KPMNC GH+ V+   L SYR+LP+R  E+G V+R+E SG LHGL+RVR FTQDDA
Sbjct: 301 QEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDA 360

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
           H+FC+ EQ+ +E   I +    I + F F   M +LSTRP K +G D +W+ A + +K  
Sbjct: 361 HIFCSFEQIQSEVSAILDFTHKIMQAFDFSYEM-ELSTRPAKSIGDDKVWEKATSALKEA 419

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
           L       + RI+  +  G GAFYGPK +  + DA+ R WQCGTIQVD NLP RF   + 
Sbjct: 420 L------KEHRIDYKIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDMNLPERFKLAFT 473

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
           N  +    PVMIHRA+ GS ERFI I+ E+F GN P +++P Q  +  I      +A ++
Sbjct: 474 NERNHAEQPVMIHRAILGSFERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHVFALKL 533

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
              LK   + +E   +N+++N K+R    +KIP+I++ G++E     + IR
Sbjct: 534 KEALKKRDIFVEVLDKNDSLNKKVRLAEKQKIPMILVLGNEEVETEILSIR 584


>gi|302783999|ref|XP_002973772.1| hypothetical protein SELMODRAFT_442211 [Selaginella moellendorffii]
 gi|300158810|gb|EFJ25432.1| hypothetical protein SELMODRAFT_442211 [Selaginella moellendorffii]
          Length = 795

 Score =  446 bits (1146), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 232/569 (40%), Positives = 341/569 (59%), Gaps = 51/569 (8%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           I + T E    L  +RH+CAH+MA AVQ+++P+ +V IGP IE GFYYDFD ++P S  +
Sbjct: 72  IPLPTNESCEELLRMRHTCAHVMAMAVQTLYPDAKVTIGPWIEKGFYYDFDLKEPLSDKD 131

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG- 177
           L +I+K+M  II R+ P  ++ +S E+A++   S  E YK+EILE I   E +T+Y  G 
Sbjct: 132 LKKIKKEMDRIIGRNLPLRREEVSREEAKDRIMSINEKYKLEILEDIKT-EPITIYHIGN 190

Query: 178 EWFDLCRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           +W+DLC GPHV  TGQ+ +K  +L  VAGAYWRGD  R ML RIYGTAW T+++L  Y  
Sbjct: 191 DWWDLCAGPHVERTGQLNRKAIELESVAGAYWRGDVKRQMLQRIYGTAWQTEEQLKAYQT 250

Query: 237 FLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEI 294
             EE+++RDHR+L ++++LF I ED G G++FWH KG  I   +  Y ++  ++  YE +
Sbjct: 251 QKEEAKRRDHRRLGQDLELFSIQEDAGGGLVFWHPKGALIRHLIEDYWKKVHLRRGYELL 310

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMF-AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
            TP V    LW+ SGH D Y+ NMF  +K  ++       + L+PMNCP H+ ++   ++
Sbjct: 311 YTPHVAKAELWKTSGHLDFYKENMFEQIKIEEE------FYQLRPMNCPFHIQIYKDRVR 364

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYRELP++ AE                                 EQ+  E   + +L   
Sbjct: 365 SYRELPIKFAEL--------------------------------EQIRGEIKSVLDLTEE 392

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           I   FGF+   + LST+PEK VGSD +W  A   +K   D I +        G+  G GA
Sbjct: 393 ILSQFGFQNYEINLSTKPEKAVGSDDIWHKATEALK---DAISDKGW---TYGIDEGGGA 446

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  ++DAIGR WQC TIQVDFNLP RF+  YV+    +  P+MIHRA+FGSIER
Sbjct: 447 FYGPKIDLKIEDAIGRTWQCSTIQVDFNLPERFDLTYVDPSQARKQPIMIHRAIFGSIER 506

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           F+GI+IE++ G+ PLW++P+QA +  +T + + Y +++   L+   +  E     E ++ 
Sbjct: 507 FVGILIESYAGDFPLWIAPVQARLLPVTDTELPYCKQVLARLREKDIRAEIAC-GERLSK 565

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIR 622
            IR   ++KIP++ + G KE   +++ +R
Sbjct: 566 LIRNAEVQKIPLMAVVGPKEVEAQTLTVR 594


>gi|319948489|ref|ZP_08022623.1| threonyl-tRNA synthetase [Dietzia cinnamea P4]
 gi|319437856|gb|EFV92842.1| threonyl-tRNA synthetase [Dietzia cinnamea P4]
          Length = 699

 Score =  446 bits (1146), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 243/634 (38%), Positives = 361/634 (56%), Gaps = 59/634 (9%)

Query: 45  GKVCDLS-DPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG 103
           G + DLS  P  +  +E++  +     +VIRHSCAH++A+AVQ  +PE ++ IGP IE+G
Sbjct: 55  GTLRDLSWAPEADTEVELVRADTEDGRSVIRHSCAHVLAQAVQDKFPEAKLGIGPPIENG 114

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPF-LKQYLSHEKARELFESKKEAYKVEIL 162
           FYYDFD  +PF+ ++L  +EK+M++II     F  ++Y S ++AR   E   E YK+E++
Sbjct: 115 FYYDFDVAEPFTPEDLKDLEKRMKKIIKAGQRFSRREYASLDEARA--ELAGEPYKLELI 172

Query: 163 E---------------------------SIPAKENVTLYRQGE--WFDLCRGPHVRSTGQ 193
           E                           ++ A +N+   R GE  W DLCRGPH  +T  
Sbjct: 173 EDKGRADAGDESGAEALEDSEIMEVGAGALTAYDNLNP-RTGEVIWSDLCRGPHTPTTKF 231

Query: 194 VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREM 253
           +  F  L + + AYWRGD +   L RIYGTAW + + +  YL  L E+EKRDHR+L  E+
Sbjct: 232 IPAF-TLTRSSAAYWRGDQSNAGLQRIYGTAWESTEAMDAYLDRLAEAEKRDHRRLGTEL 290

Query: 254 DLFHIAED-GSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHW 311
           DLF   ++ GSG   +H +G  I   +  + +RR +   Y  +NTP V    L+++S H 
Sbjct: 291 DLFSFPDEIGSGFPVFHPRGGIIRNEMEQHSLRRHLAAGYSLVNTPHVTKGDLFRKSQHL 350

Query: 312 DSYRANMFAVKCAD-------DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
             Y   MF     D       +  K  + + +KPMNCP H  VF+   +SYRELP+R+ E
Sbjct: 351 SWYSEGMFPPMVLDAEHDADGNETKPGQDYYVKPMNCPMHNLVFDSRGRSYRELPLRMFE 410

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FG+VYR E SG +HGL R RGFTQDDAH++CT+EQM  E   + + IIS+ +D+G +   
Sbjct: 411 FGTVYRYEKSGVIHGLTRARGFTQDDAHIYCTEEQMEGEIASVLSFIISLLRDYGLDDFY 470

Query: 425 VKLSTR-PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL----GEGAFYGPKF 479
           ++LST+ PEK VG D LW+ A   ++ V            N+G+ L    G  AFYGPK 
Sbjct: 471 LELSTKDPEKYVGGDELWERATETLRRVA----------TNSGLELVPDPGGAAFYGPKI 520

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
               +DAIGR WQ  T+Q+DFNLP  F+  Y  +   K  PVMIHRA+FGSIERF  +++
Sbjct: 521 SVQARDAIGRTWQMSTVQLDFNLPELFDLTYNAADGTKKRPVMIHRALFGSIERFFAVLL 580

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E++ G  P WL+P+Q +   +  +  ++ +++ + L+   +  E D  +E +  KIR H+
Sbjct: 581 EHYAGLFPAWLAPVQVVGIPVAEAHEKHLEDVIDELRGRGIRAELDTSDERMQKKIRNHT 640

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
             K+P +++ GD++    ++  R    T    VS
Sbjct: 641 TGKVPFMLLAGDRDVEAGAVSFRFPDGTQLNGVS 674


>gi|307200699|gb|EFN80796.1| Threonyl-tRNA synthetase, cytoplasmic [Harpegnathos saltator]
          Length = 691

 Score =  446 bits (1146), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 245/649 (37%), Positives = 369/649 (56%), Gaps = 30/649 (4%)

Query: 2   PSDIKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           P+DI +  PDG  +      +T  DVA+SIS+ LA   V   +N ++ DL  P+  +  +
Sbjct: 49  PADITVMLPDGKEVSAQSWRSTPYDVAKSISQGLADNTVIAKVNNELWDLDRPLEGDCKL 108

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDE 118
           +++  +DP    V  HS AHI+ EA++ ++    +  GP IE+GFYYD    ++  S  +
Sbjct: 109 QLLKFDDPEGQQVFWHSSAHILGEAMERVYGGC-LCYGPPIENGFYYDMHLDDKGISYTD 167

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
              +E   + I+    PF +  ++ E   E+F  K   +K+ I+         T YR G 
Sbjct: 168 FPYLESLYKNIVKEKQPFERLEMTKENLLEMF--KYNEFKLRIINEKIHTPTTTAYRCGP 225

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLCRGPHVR TG+++   K+ K + AYW G++N   L R+YG ++   ++L ++    
Sbjct: 226 LIDLCRGPHVRHTGKIRAV-KITKNSSAYWEGNANAESLQRLYGISFPDNKQLKEWEKLQ 284

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
           EE+ KRDHRK+ +E +LF   E   G  F+  +G  I+ TLI ++R +  K  ++E+ +P
Sbjct: 285 EEAAKRDHRKIGKEQELFFFHELSPGSCFFQPRGAYIYNTLIDFIRSEYRKRGFQEVISP 344

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  LWQ SGHW  Y  NMF+     +T      +ALKPMNCPGH  +F+   +S+RE
Sbjct: 345 NIYNSKLWQVSGHWQHYAENMFSFDVEKET------YALKPMNCPGHCMIFDVRSRSWRE 398

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+RLA+FG ++RNE SG+L GL RVR F QDDAH+FC+ +Q+  E L   + +  +Y  
Sbjct: 399 LPLRLADFGVLHRNEMSGALTGLTRVRRFQQDDAHIFCSVDQINKEILSALDFLRHVYSV 458

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKN----SSQDRINTGVLLGEGA 473
           FGF   +  LSTRPEK +G  A+W+ AE  ++  L+T       + QD          GA
Sbjct: 459 FGFTFDLC-LSTRPEKFLGDIAIWNQAEKALEDSLNTFDEPWTLNPQD----------GA 507

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  ++DA+ R  QC TIQ+DF LP RFN  YVN   EK  PV+IHRA+ GS+ER
Sbjct: 508 FYGPKIDITIRDALKRAHQCATIQLDFQLPIRFNLSYVNESGEKVRPVIIHRAILGSVER 567

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETIN 592
            I I+ E++ G  P WLSP QA+V  + S   EYA ++   L    + +E D   N++ N
Sbjct: 568 MIAILTESYAGKWPFWLSPRQAMVVPVASQLDEYAYQVKQKLWDAGIMVEIDVDPNDSFN 627

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            KIR   + +   I++ G+KE +  ++ IR   +    ++ + D I  L
Sbjct: 628 KKIRNAQLAQFNFILVVGEKERNAGTVNIRTRDNVVHGEMGVEDLIEKL 676


>gi|194765983|ref|XP_001965104.1| GF21565 [Drosophila ananassae]
 gi|190617714|gb|EDV33238.1| GF21565 [Drosophila ananassae]
          Length = 749

 Score =  445 bits (1145), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 249/645 (38%), Positives = 367/645 (56%), Gaps = 24/645 (3%)

Query: 5   IKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG--SIEI 61
           IK+T PDG  +       T  +VA  IS+ LA   V   +NG+V DL D V EG  ++++
Sbjct: 111 IKVTLPDGKQVDATSWETTPYEVARGISQGLADNTVISKVNGEVWDL-DRVLEGNCTLQL 169

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELA 120
           +  +DP + AV  HS AHIM EA++ I+    +  GP IE+GFYYD   E +  S+++  
Sbjct: 170 LKFDDPEAQAVFWHSSAHIMGEAMERIYGG-HLCYGPPIENGFYYDMHLEGEGISTNDYG 228

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            +E  +++I+     F +  +      E+F  K   +KV IL      +  T+Y+ G   
Sbjct: 229 TMESLVKQIVKEKQNFERLEMKKSDLLEMF--KYNEFKVRILNEKVTTDRTTVYKCGSLI 286

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHVR TG+VK   K+ K +  YW G ++   L R+YG ++   ++L ++    EE
Sbjct: 287 DLCRGPHVRHTGKVKAL-KITKNSSTYWEGKADAETLQRVYGISFPDPKQLKEWEKLQEE 345

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQV 299
           + KRDHRK+ RE +LF   E   G  F+  +G  I+ TL+ +M+ +  K  ++E+ +P +
Sbjct: 346 AAKRDHRKIGREQELFFFHELSPGSCFFQPRGAHIYNTLMDFMKAEYRKRGFQEVISPNI 405

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +  LW  SGHW  Y  NMF+ +   +       FALKPMNCPGH  +F++  +S+RELP
Sbjct: 406 YNAKLWMTSGHWQHYAENMFSFEVEKEK------FALKPMNCPGHCLIFDNRNRSWRELP 459

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+A+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E       +  +Y  FG
Sbjct: 460 LRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAPEQIKSEMKGCLEFLKHVYTIFG 519

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F   +V LSTRPEK +G    W+DAE  +   L+      ++        G+GAFYGPK 
Sbjct: 520 FSFQLV-LSTRPEKYLGELEQWNDAEKALAESLNEFGMPWKENP------GDGAFYGPKI 572

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +  + DA+ R  QC TIQ+DF LP RFN  Y+    EK  PV+IHRA+ GS+ER I I+ 
Sbjct: 573 DITIMDALKRAHQCATIQLDFQLPIRFNLSYIADDGEKKRPVIIHRAILGSVERMIAILT 632

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF-RNETINYKIREH 598
           ENF G  P WLSP Q +V  +  +  +YAQ + + L +     E D    +T+N KIR  
Sbjct: 633 ENFAGKWPFWLSPRQVMVVPVGPAYDQYAQSVRDQLHAAGFMSEADCDAGDTMNKKIRNA 692

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            + +   I++ GDKE S  ++ +R   +    +VS+ + I  L K
Sbjct: 693 QLAQFNFILVVGDKERSSNTVNVRTRDNKVHGEVSVAELITKLQK 737


>gi|283457978|ref|YP_003362585.1| threonyl-tRNA synthetase [Rothia mucilaginosa DY-18]
 gi|283134000|dbj|BAI64765.1| threonyl-tRNA synthetase [Rothia mucilaginosa DY-18]
          Length = 706

 Score =  445 bits (1145), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 246/638 (38%), Positives = 362/638 (56%), Gaps = 53/638 (8%)

Query: 37  KAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVA 95
           K V   +NG + DLS  +  G S+E +   +P  L V+RHS AH+MA+AVQ    + ++ 
Sbjct: 63  KIVVARVNGVLVDLSHELSAGDSVEPVFIHEPDGLNVLRHSAAHVMAQAVQEYRKDAKLG 122

Query: 96  IGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKE 155
           IGP I DGFY+DFD  +PF+ ++L +IEK M +II     F ++ ++H++A  + E   E
Sbjct: 123 IGPYITDGFYFDFDVAEPFTPEDLKKIEKSMIKIIKSGQLFRRRVVTHDEA--VAEMANE 180

Query: 156 AYKVEILE---------------SIPAKEN-VTLY-----RQGE--WFDLCRGPHVRSTG 192
            YK+E+L                S+   E  +T+Y     + GE  W DLCRGPH+ +T 
Sbjct: 181 PYKLELLSLTQGPGSGADAAEGASVEVGEGEITIYDNVHPKTGETVWKDLCRGPHLPNTK 240

Query: 193 QVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLARE 252
            +   + LM+  GAYWRG    PML RIYGTAW T+ EL  Y   + E+E+RDHR+L RE
Sbjct: 241 LIANGYALMRAGGAYWRGSEKNPMLQRIYGTAWPTKDELVAYKERIAEAERRDHRRLGRE 300

Query: 253 MDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGH 310
           +DLF   ++ G G+   H KG  I + +  Y+R R I++ ++ ++TP +  + L+  SGH
Sbjct: 301 LDLFSFPKNIGPGLPVIHPKGGVIKREMEDYVRTRHIQEGFQYVSTPHISKEDLFYTSGH 360

Query: 311 WDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYR 370
              Y   MF     D+       + LK MNCP H  ++    +SYRELP+R  EFG+VYR
Sbjct: 361 LPYYADGMFPPMELDNG-----HYRLKAMNCPMHNEIYRSRGRSYRELPLRFFEFGTVYR 415

Query: 371 NEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR 430
           +E SG L GL RVR  TQDD+H + TKEQ  +E   +   ++S+ +DFG     ++LSTR
Sbjct: 416 DEKSGVLQGLTRVRMITQDDSHSYVTKEQAPDEVRHLLKFMLSLLEDFGMTDFYLELSTR 475

Query: 431 ------PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL----GEGAFYGPKFE 480
                  +K +G+D  W++A  +++ V             TG+ L    G  AFYGPK  
Sbjct: 476 DTEGDKKDKFIGTDEQWEEATAVLEQVAK----------ETGLELVPDPGGAAFYGPKIS 525

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
              KDAIGR WQ  T+Q DFN PSRF   Y  +      PVMIH A FGSIERF+G++ E
Sbjct: 526 VQAKDAIGRTWQMSTVQYDFNQPSRFGLEYQAADGTVQEPVMIHSAKFGSIERFLGVLTE 585

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           ++ G  P WL+P+Q I   +  +  +Y  EIA+ L++H + +E D+ ++    KIR  S 
Sbjct: 586 HYAGAFPAWLAPVQVIGVPVAEAFNDYMTEIADKLRAHGVRVEVDYGSDRFTKKIRTAST 645

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           +K+P I+I G ++A   ++  R  G+     V + +A+
Sbjct: 646 EKVPFILIAGGEDAEHGAVSFRFRGNKQENGVPVDEAV 683


>gi|187736219|ref|YP_001878331.1| threonyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835]
 gi|187426271|gb|ACD05550.1| threonyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835]
          Length = 630

 Score =  445 bits (1145), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 228/587 (38%), Positives = 350/587 (59%), Gaps = 41/587 (6%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           L  +RHSCAH++A A+  +WP+ Q+A GP +++GFYYD + +   S+++  +IE++M+++
Sbjct: 19  LERLRHSCAHVLATAICRLWPDAQLAGGPAVDNGFYYDVELDHRISTEDFERIEEEMKKV 78

Query: 130 IARDSPFLKQYLSHEKARELFES----------KKEAYKVEILESIPAKENVTLYRQGEW 179
           +  +  F K+ +S   A ++ ES          +   +K+++L  IP  E ++LYR G++
Sbjct: 79  VKENQVFQKEVISRADAMKMAESGELGALGPRSEPSRFKIDLLNDIPEDEEISLYRNGDF 138

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLC GPHV  TG  K F K+M VA A+++GD NRPML RIYGT +  + +L ++L  LE
Sbjct: 139 TDLCAGPHVGRTGNCKAF-KIMSVASAFYKGDKNRPMLQRIYGTCFPNRTQLDEHLERLE 197

Query: 240 ESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
           E+ +RDHRKL RE+ LF I E  G G+I W  KG  I ++L  ++  ++ K  Y ++ TP
Sbjct: 198 EARRRDHRKLGRELGLFCIDESVGQGLILWKPKGALIRRSLQDFITEELDKLGYSQVYTP 257

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL-------------------RTFALKP 338
            +    L++ SGH+  Y+ + +A     D ++ L                     + LKP
Sbjct: 258 NIGKLDLYRTSGHFPYYQESQYAPIPERDAMEKLSQEGASCAELFNGLATGTIEGYMLKP 317

Query: 339 MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE 398
           MNCP H+ ++ +   SYR+LPVRLAEFG+VYR E SG L G+ RVRGFTQDDAH+FCT +
Sbjct: 318 MNCPHHIKIYANDAHSYRDLPVRLAEFGTVYRWEQSGELGGMTRVRGFTQDDAHIFCTPD 377

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLSTR-PE--KRVGSDALWDDAENIMKGVLDTI 455
           Q+  E  +   ++ +I+   G     V+LS R PE  K VGS   WD AE  ++   + +
Sbjct: 378 QLAGEIRQCLGIVKTIFGTLGMTDYRVRLSMRDPESDKYVGSPENWDKAEQALREAAEWL 437

Query: 456 KNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS 515
                +        GE AFYGPK ++I++DAIGR+WQ GT+QVD+NLP RF+  Y  + +
Sbjct: 438 GADYSEEA------GEAAFYGPKIDFIVRDAIGREWQLGTVQVDYNLPERFDLHYTGADN 491

Query: 516 EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLL 575
           +   PVM+HRA FGS+ERF G++IE+F+G  P WLSP Q  V  I+    + A      L
Sbjct: 492 KPHRPVMVHRAPFGSMERFTGLLIEHFEGKFPTWLSPEQVRVLPISDKVTDVAAAHRTAL 551

Query: 576 KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
            +  + +  D   + I  KIR   + ++P +++ G +EA + ++ +R
Sbjct: 552 AARGVRVTVDETPDKIGAKIRNARLDRVPYMLVLGQREAEDGTVSVR 598


>gi|50954739|ref|YP_062027.1| threonyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07]
 gi|71657985|sp|Q6AFC3|SYT_LEIXX RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|50951221|gb|AAT88922.1| threonyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07]
          Length = 695

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 245/651 (37%), Positives = 369/651 (56%), Gaps = 50/651 (7%)

Query: 26  VAESISRSLAKKAVAVAINGKVCDLSDPVREGSI-EIITPEDPRSLAVIRHSCAHIMAEA 84
           VA+       +  VA+ +NG++ DL+  V    + E +T   P  LA++RHS AH++A+A
Sbjct: 38  VADGFEFFTDRSVVAMRVNGELKDLATIVTTTDVVEPVTIYSPDGLAILRHSTAHVLAQA 97

Query: 85  VQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHE 144
           VQ++ PE ++ IGP I DGFYYDFD  +PF+ ++L  ++K+M  I      F+++ ++ E
Sbjct: 98  VQTVNPEAKLGIGPPIADGFYYDFDVAEPFTPEDLKALDKEMSRIQRAGQRFVRRVVTDE 157

Query: 145 KARELFESKKEAYKVEIL---------ESIPAKENV-------TLY-----RQGE--WFD 181
           +AR   E   E YK+E++           +  +E+V       T+Y     + GE  W D
Sbjct: 158 EARA--ELAGEPYKLELIGLKGSDAESAEVGGEESVEVGSGELTIYDNVDPKTGETIWKD 215

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ +T  +   + L +VA AYWRG    P L RIYGTAW ++ EL  Y   +EE+
Sbjct: 216 LCRGPHLPNTRMIGNGWALTRVAAAYWRGSEKNPQLQRIYGTAWPSKDELRAYQTRMEEA 275

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQV 299
            KRDHRKL  E+DLF   ++ GSG+  +H KG  I + +  YMR R I + YE +NTP +
Sbjct: 276 AKRDHRKLGVELDLFSFPDEIGSGLAVFHPKGGIIRKEIEDYMRDRLIANGYEMVNTPHI 335

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADD-------TIKDLRTFALKPMNCPGHVAVFNHGL 352
              HL++ S H + YR  MF     D+         +  + + LKPMNCP H  +F    
Sbjct: 336 TKGHLFETSQHLNWYREGMFPPMHLDEERDAEGNVTRQGQDYYLKPMNCPMHNLIFRSRG 395

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
           +SYRELP+RL+EFG+VYR E SG+L GL RVRG TQDDAH++ T+EQ+ +E  +    ++
Sbjct: 396 RSYRELPLRLSEFGTVYRYEKSGTLSGLTRVRGLTQDDAHIYVTEEQIRDEFARQLQFVL 455

Query: 413 SIYKDFGFEKIMVKLSTR-PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL-- 469
              + +G     ++LST+ PEK VGSD  W+ A   ++ V           + +G+ L  
Sbjct: 456 ETLRGYGLTDFYLELSTKDPEKYVGSDESWETATETLREVA----------VESGLELVD 505

Query: 470 --GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAV 527
             G  AFYGPK     +DAIGR WQ  T+Q+DFN P  F   Y  +   +  P MIHRA+
Sbjct: 506 DPGGAAFYGPKISVQARDAIGRTWQLSTVQLDFNQPELFELEYNAADGTRKQPAMIHRAL 565

Query: 528 FGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR 587
            GSIERF  I++E+  G  P+WL+P Q +   +  +   +  ++   L++  +  E D  
Sbjct: 566 LGSIERFFAILLEHHAGAFPVWLAPTQVVGIPVADAYGPFLDDVIAQLRARGVRAEVDHS 625

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           ++ +  KIR H+  K+P  +I G+++AS  ++  R    T    V++ +AI
Sbjct: 626 DDRMQKKIRTHTKAKVPFQLIVGEEDASAGTVSFRFRDGTQLNGVAVDEAI 676


>gi|307721910|ref|YP_003893050.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Sulfurimonas
           autotrophica DSM 16294]
 gi|306980003|gb|ADN10038.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Sulfurimonas
           autotrophica DSM 16294]
          Length = 602

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 225/588 (38%), Positives = 361/588 (61%), Gaps = 21/588 (3%)

Query: 39  VAVAINGKVCDLSDPVREG--SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAI 96
           +A+  +G++ D       G    +I     P +L V+RHS AH+MA+A++S++P+ +  +
Sbjct: 4   IAIKKDGEIIDTQTAKELGFEGEQIHLDNSPEALEVLRHSTAHLMAQAIKSLYPDAEFYV 63

Query: 97  GPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEA 156
           GP++++GFYYDF         +L +IEK+M     +     K  ++ ++A+E F  K + 
Sbjct: 64  GPVVKEGFYYDFKTSAEIGEGDLKKIEKQMLSFAKKKYKIEKYEITMDEAKEKF--KDDH 121

Query: 157 YKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPM 216
            K+E+++ IP+ + V++Y+QG++ DLCRGPH+ + G ++ +FKL K++GAY  GDS   M
Sbjct: 122 LKLEVMKRIPS-DTVSIYKQGDFEDLCRGPHLPNIGLIR-YFKLTKISGAYLGGDSKNEM 179

Query: 217 LSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKI 275
           L+RIYG A+  ++ L  ++  L E+EKRDHRK+  EM LF   E+ G+G   W   G ++
Sbjct: 180 LTRIYGIAFADKESLKAHMEQLAEAEKRDHRKIGNEMKLFTFREEVGAGFPIWLPAGGRL 239

Query: 276 FQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
              L S + +   K  YE +  P++L   LW  SGH+ +Y  NM+          D   F
Sbjct: 240 RARLESLLFKAHRKRGYEPVRGPEMLRSDLWMTSGHYQNYGENMYFTHI------DELEF 293

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
            +KPMNC GH+ V+   L SYR+LP++  E+G V+R+E SG+LHGL RVR FTQDDAH+F
Sbjct: 294 GVKPMNCVGHIKVYEDELHSYRDLPIKYFEYGVVHRHEASGALHGLFRVREFTQDDAHIF 353

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDT 454
           C  +Q+  + +++ + +  I   F F+  M+ +ST+PEK VG D +W+ +   +K  +D 
Sbjct: 354 CRADQIEEQIIEVVDFVDKIMSTFEFDYKMM-ISTKPEKAVGDDKVWEISTQALKNAMD- 411

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH 514
            KN     I+ G     GAFYGPK +  + DAIGR+WQCGT+Q+DFNLP RF   Y    
Sbjct: 412 -KNELAYEIDEG----GGAFYGPKIDIKITDAIGREWQCGTVQLDFNLPERFKLEYNGEE 466

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANL 574
           ++K  PVMIHRA+ GS ERFIGI+ E++ G  P++++P Q  +  +  +  EYA+ +++ 
Sbjct: 467 NDKIQPVMIHRAILGSFERFIGILTEHYAGEFPMFVAPTQVAIVPVAETHKEYAKLLSDK 526

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           L   +   E   +N+++N +IR     ++P+I++ GD+E + +++ IR
Sbjct: 527 LIDINADSEIYAKNDSLNKRIRTAEKTRVPMIVVIGDEEIANKTVAIR 574


>gi|189219987|ref|YP_001940627.1| Threonyl-tRNA synthetase [Methylacidiphilum infernorum V4]
 gi|189186845|gb|ACD84030.1| Threonyl-tRNA synthetase [Methylacidiphilum infernorum V4]
          Length = 611

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 240/609 (39%), Positives = 363/609 (59%), Gaps = 41/609 (6%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           L  +RHS AH++A A+  IWPE Q+A GP +E+GFYYD + +   S  +   IE++M+ I
Sbjct: 4   LEKLRHSAAHVLAAALLEIWPEAQLAAGPPVEEGFYYDVELDHRISPQDFPAIEERMKRI 63

Query: 130 IARDSPFLKQYLSHEKAREL--------FESKK--EAYKVEILESIPAKENVTLYRQGEW 179
           I+   PF +  +S E+AR+L           +K    YK++ILESIP  E +TLY+ G +
Sbjct: 64  ISEKQPFKRIEVSREEARQLGLKGRLGALSERKIPSRYKLDILESIPENEPITLYQNGSF 123

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLC GPHV  TG +K F KL  V+ AY++GD   P L RIYGTA+ T +EL  +L  LE
Sbjct: 124 IDLCAGPHVEDTGSIKSF-KLTHVSSAYYKGDEKNPQLQRIYGTAFFTAKELEDHLKQLE 182

Query: 240 ESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
           +++KRDHRK+ +E++LF I E  G+G+  W  KG  I + L +++  ++ +  Y+ + TP
Sbjct: 183 QAKKRDHRKIGKELELFLIDERVGAGLPLWLPKGAVIRRELQNFLTEELLQRGYQLVYTP 242

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIK-------------------DLRTFALKP 338
            +    L++ SGH+  YR + F      D +K                   ++  + LKP
Sbjct: 243 HIGSLDLFRTSGHYPYYRESQFPPILDPDELKAFEDKTGSCAELANRLEKGEVGGYLLKP 302

Query: 339 MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE 398
           MNCP H+ +F+   +SYR+LPVR+AEFG+VYR E SG L GL RVRGFTQDDAH+FCT+ 
Sbjct: 303 MNCPMHIRIFDSKPRSYRDLPVRIAEFGTVYRFEKSGELSGLTRVRGFTQDDAHIFCTES 362

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLSTR---PEKRVGSDALWDDAENIMKGVLDTI 455
           Q+  E +   +L+  + +  G      +L  R    EK VGS   W  AE  ++      
Sbjct: 363 QVEGELMDCLDLVKVVIQKVGLLDTKARLGLRGEEKEKYVGSPESWKKAEEGLR------ 416

Query: 456 KNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS 515
           + +++  I+     GE AFYGPK ++++KDAIGR WQ GT+Q+D+NLP+RF+  YV    
Sbjct: 417 RAAAKSGIDFVEEPGEAAFYGPKVDFLVKDAIGRSWQLGTVQLDYNLPARFSLSYVGEDG 476

Query: 516 EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLL 575
           +   PV+IHRA FGS+ERF+ I+IE+++G+ PLWL+P Q  V  ++   + Y ++I  +L
Sbjct: 477 QLHAPVIIHRAPFGSLERFLAILIEHYEGHFPLWLAPEQVRVIPVSDGLIAYGEKIKEIL 536

Query: 576 KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
           + +   +  D +N+T+  KIR   ++K+P ++I G KE     + +R        ++SL 
Sbjct: 537 QQNRFRVSLDRKNDTLGAKIRVAQLQKVPYMLIVGKKEEQMSRVSVRTSKKGNIGEMSLD 596

Query: 636 DAIPILTKE 644
             I ++T E
Sbjct: 597 TFISLITAE 605


>gi|68536143|ref|YP_250848.1| threonyl-tRNA synthetase [Corynebacterium jeikeium K411]
 gi|123748238|sp|Q4JVC7|SYT_CORJK RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|68263742|emb|CAI37230.1| thrS [Corynebacterium jeikeium K411]
          Length = 691

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 242/629 (38%), Positives = 357/629 (56%), Gaps = 40/629 (6%)

Query: 45  GKVCDLS-DPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG 103
           G++ DLS  P ++  +  +         VIRHSCAH++A+AVQ  +P  ++ IGP I++G
Sbjct: 50  GQLRDLSWVPQQDVEVAAVPANTDEGRGVIRHSCAHVLAQAVQKEFPGTKLGIGPAIDNG 109

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPF-LKQYLSHEKARELFESKKEAYKVEIL 162
           FYYDF   +PF+ ++L ++EK M++II     F  K Y   E+AR   E   E +K E++
Sbjct: 110 FYYDFQVAEPFTPEDLNKLEKTMKKIIKSGQKFERKAYDDVEQARA--EYADEPFKTELI 167

Query: 163 --------ESIPAKE----NVTLY-----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKV 203
                   +S  A E     +T Y     R GE  W+DLCRGPHV +T  +  F  L + 
Sbjct: 168 ADKGNVDPDSDEATEVGAGELTAYSNVNPRTGEVEWYDLCRGPHVPTTRYIPAF-ALTRS 226

Query: 204 AGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-G 262
           + AYWRGD ++  L RIYGTAW +++ L +Y   + E+EKRDHR+L +E+DLF   ++ G
Sbjct: 227 SAAYWRGDQSKAGLQRIYGTAWESKEALAEYQTMMAEAEKRDHRRLGQELDLFSFPDEIG 286

Query: 263 SGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG   +H  G  +   +  + R R I   Y  +NTP V    L+Q+SGH D Y   MF  
Sbjct: 287 SGFPVFHPDGGIVRLEMEEHSRKRHIASGYSFVNTPHVTKGDLFQKSGHLDFYADGMFPP 346

Query: 322 KCAD-------DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
              D       +  K  + +  KPMNCP H  +F    +SYRELP+RL EFG+VYR E S
Sbjct: 347 MQLDGETDDEGNVTKPAQDYYAKPMNCPMHNLIFASRGRSYRELPLRLFEFGTVYRYEKS 406

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR-PEK 433
           G +HGL R RGFTQDDAH++CT++Q+  E   +   IIS+ +D+G +   ++LST+ P K
Sbjct: 407 GVIHGLTRARGFTQDDAHIYCTEDQLEQELTTVLEFIISLLRDYGLDDFYLELSTKDPNK 466

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
            VGSD +W+ +  I++ V      +++  +         AFYGPK     +DAIGR WQ 
Sbjct: 467 FVGSDEIWERSTEILERV------ATKSGLELVPDPAGAAFYGPKISVQARDAIGRTWQM 520

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI 553
            T+Q+DFNLP RFN  Y      K  P+MIHRA+FGSIERF G+++E++ G  P WL+P 
Sbjct: 521 STVQLDFNLPERFNLEYTAPDGSKQRPIMIHRALFGSIERFFGVLLEHYAGAFPAWLAPH 580

Query: 554 QAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
           Q +   +     EY +  A  L++  +  E D  ++ +  KIR H+  K+P +++ G ++
Sbjct: 581 QVVGIPVADEFNEYLENFAADLRAQGIRAEVDTSDDRMQKKIRNHTTGKVPFMLLVGGRD 640

Query: 614 ASERSIGIRRFGSTTTQKVSLLDAIPILT 642
               ++  R    T    V   DA+ I++
Sbjct: 641 VEANAVSFRFLDGTQVNGVPREDALRIIS 669


>gi|255327209|ref|ZP_05368284.1| threonine--tRNA ligase [Rothia mucilaginosa ATCC 25296]
 gi|255295827|gb|EET75169.1| threonine--tRNA ligase [Rothia mucilaginosa ATCC 25296]
          Length = 677

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 246/638 (38%), Positives = 361/638 (56%), Gaps = 53/638 (8%)

Query: 37  KAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVA 95
           K V   +NG + DLS  +  G S+E +   +P  L V+RHS AH+MA+AVQ    + ++ 
Sbjct: 34  KIVVARVNGVLVDLSHELSAGDSVEPVFIHEPDGLNVLRHSAAHVMAQAVQEYRKDAKLG 93

Query: 96  IGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKE 155
           IGP I DGFY+DFD  +PF+ ++L +IEK M +II     F ++ ++H++A  + E   E
Sbjct: 94  IGPYITDGFYFDFDVAEPFTPEDLKKIEKSMIKIIKSGQLFRRRVVTHDEA--VAEMANE 151

Query: 156 AYKVEILE---------------SIPAKEN-VTLY-----RQGE--WFDLCRGPHVRSTG 192
            YK+E+L                S+   E  +T+Y     + GE  W DLCRGPH+ +T 
Sbjct: 152 PYKLELLSLTQGPGSGADAAEGASVEVGEGEITIYDNVHPKTGETVWKDLCRGPHLPNTK 211

Query: 193 QVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLARE 252
            +   + LM+  GAYWRG    PML RIYGTAW T+ EL  Y   + E+E+RDHR+L RE
Sbjct: 212 LIANGYALMRAGGAYWRGSEKNPMLQRIYGTAWPTKDELVAYKERIAEAERRDHRRLGRE 271

Query: 253 MDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGH 310
           +DLF   ++ G G+   H KG  I + +  Y+R R I++ ++ ++TP +  + L+  SGH
Sbjct: 272 LDLFSFPKNIGPGLPVIHPKGGVIKREMEDYVRTRHIQEGFQYVSTPHISKEDLFYTSGH 331

Query: 311 WDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYR 370
              Y   MF     D+       + LK MNCP H  ++    +SYRELP+R  EFG+VYR
Sbjct: 332 LPYYADGMFPPMELDNG-----HYRLKAMNCPMHNEIYRSRGRSYRELPLRFFEFGTVYR 386

Query: 371 NEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR 430
           +E SG L GL RVR  TQDD+H + TKEQ  +E   +   ++S+ +DFG     ++LSTR
Sbjct: 387 DEKSGVLQGLTRVRMITQDDSHSYVTKEQAPDEVRHLLKFMLSLLEDFGMTDFYLELSTR 446

Query: 431 ------PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL----GEGAFYGPKFE 480
                  +K +G+D  W+ A  +++ V             TG+ L    G  AFYGPK  
Sbjct: 447 DTEGDKKDKFIGTDEQWEAATAVLEQVAK----------ETGLELVPDPGGAAFYGPKIS 496

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
              KDAIGR WQ  T+Q DFN PSRF   Y  +      PVMIH A FGSIERF+G++ E
Sbjct: 497 VQAKDAIGRTWQMSTVQYDFNQPSRFGLEYQAADGTVQEPVMIHSAKFGSIERFLGVLTE 556

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           ++ G  P WL+P+Q I   +  +  +Y  EIA+ L++H + +E D+ ++    KIR  S 
Sbjct: 557 HYAGAFPAWLAPVQVIGVPVAEAFNDYMTEIADKLRAHGVRVEVDYGSDRFTKKIRTAST 616

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           +K+P I+I G ++A   ++  R  G+     V + +A+
Sbjct: 617 EKVPFILIAGGEDAEHGAVSFRFRGNKQENGVPVDEAV 654


>gi|302866733|ref|YP_003835370.1| threonyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029]
 gi|302569592|gb|ADL45794.1| threonyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029]
          Length = 672

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 244/634 (38%), Positives = 366/634 (57%), Gaps = 50/634 (7%)

Query: 37  KAVAVAIN--GKVCDLS-DPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQ 93
           KA+ V  +  G++ DL   P  + ++E +T + P  L V+RHS AH++A+AVQ ++P+ +
Sbjct: 36  KAIVVVRDPQGQLRDLDWRPAEDVAVEPVTLDSPDGLNVLRHSTAHVLAQAVQDVFPDAK 95

Query: 94  VAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSH-EKARELFES 152
           + IGP IE+GFYYDF  ++PF  D+L ++EK+MQEI+     F ++  +  ++AR   E 
Sbjct: 96  LGIGPPIENGFYYDFGVDKPFQPDDLTKLEKRMQEIVKSGQRFRRRRFADLDEARS--EL 153

Query: 153 KKEAYKVEILE----SIPAKE-------NVTLYRQGE-------WFDLCRGPHVRSTGQV 194
             E YK+E++E     + + E        +T+Y           W DLCRGPH+ +T ++
Sbjct: 154 AAEPYKLELIEVKGEGLDSSEVMEVGGGELTIYDNLAANEDKVCWSDLCRGPHLPNT-RL 212

Query: 195 KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMD 254
              FKLM+ A AYWRG    P L R+YGTAW T+ EL  YL  LEE+ +RDHRKL  ++D
Sbjct: 213 IGAFKLMRSAAAYWRGSEKNPQLQRVYGTAWPTRDELKAYLKLLEEAARRDHRKLGADLD 272

Query: 255 LFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWD 312
           LF   ++ GSG+  +H KG  + + +  Y+R R +++ ++ + TP +  + L+  SGH  
Sbjct: 273 LFSFPDEIGSGLPVFHPKGGVLKRVMEDYVRARHVEEGFDYVGTPHISKEGLFHTSGHLP 332

Query: 313 SYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE 372
            Y+  MF     + +      + LK MNCP H  ++    +SYR+LP+RL EFG+VYR E
Sbjct: 333 YYKDTMFPPMEMEGS-----DYYLKAMNCPMHNLIYRSRGRSYRQLPIRLFEFGTVYRYE 387

Query: 373 PSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR-- 430
            SG +HGL RVRGFTQDD+H +CT+EQ  +E   +   ++S+ +DFG +   ++LSTR  
Sbjct: 388 KSGVIHGLTRVRGFTQDDSHSYCTREQAPSEIKHLLGFVLSLLRDFGIDDFYLELSTRDE 447

Query: 431 --PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL----GEGAFYGPKFEYILK 484
             P+K VGSD+ W  A  +++          Q  + TG+ L    G  AFYGPK     K
Sbjct: 448 SKPDKFVGSDSDWATATAVLE----------QCGLETGLELVPDPGGAAFYGPKISVQAK 497

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           DAIGR WQ  TIQ DFN P  F   Y  +   +  PVMIH A FGSIERFIG++ E++ G
Sbjct: 498 DAIGRTWQMSTIQYDFNQPKGFGLEYQAADGTRQQPVMIHCAKFGSIERFIGVLTEHYAG 557

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P WL+P+Q +   I     +Y  + A  L+ H +  E D  +E +  KIR    +KIP
Sbjct: 558 AFPAWLAPVQVVGIPIRDEHGDYLVDFAATLRRHGIRAEVDLGDERMQKKIRNAQQQKIP 617

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
            ++I GD + +  ++  R    +    V + +A+
Sbjct: 618 FMVIAGDDDVAAGTVSFRYRDGSQRNGVPVDEAV 651


>gi|323359943|ref|YP_004226339.1| threonyl-tRNA synthetase [Microbacterium testaceum StLB037]
 gi|323276314|dbj|BAJ76459.1| threonyl-tRNA synthetase [Microbacterium testaceum StLB037]
          Length = 666

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 240/648 (37%), Positives = 368/648 (56%), Gaps = 53/648 (8%)

Query: 36  KKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           +  VA+ +NG++ DL+  V  +  +E +T +    L+++RHS AH++A+AVQ + P+  +
Sbjct: 15  RSVVALRVNGELKDLATTVTADDEVEPVTIDSADGLSILRHSTAHVLAQAVQRVKPQANL 74

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            IGP + DGFYYDF  ++PF+ ++L  I+K+M+ I+  +  F+++ ++ ++AR   E   
Sbjct: 75  GIGPPVTDGFYYDFQVDEPFTPEDLKVIKKEMERIVRENQRFVRRVVTDDEARA--ELAD 132

Query: 155 EAYKVEILE------------------------SIPAKENVTLYRQGEWFDLCRGPHVRS 190
           E +K+E++                          +   +NVT   +  W DLCRGPHV  
Sbjct: 133 EPFKLELIGLKGGASTGSATEIAEGASVEVGAGELTIYDNVTRDGETAWKDLCRGPHVPG 192

Query: 191 TGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLA 250
           T  +   + L ++AGAYWRG    P L RIYGTAW T+ EL  Y + LEE+ KRDHRKL 
Sbjct: 193 TRLIGNGWDLTRIAGAYWRGSEKNPQLQRIYGTAWPTKDELRAYQHRLEEAAKRDHRKLG 252

Query: 251 REMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQS 308
           +E+DLF   ++ G G+  +H KG  I   +  YMR R +   YE +NTP +    L+  S
Sbjct: 253 KELDLFSFPDEIGPGLSVFHPKGGIIRYEIERYMRERLLASGYEVVNTPHITKGDLFMTS 312

Query: 309 GHWDSYRANMFAVKCADDTI-------KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           GH   Y   M+     D+ +       ++ + + LKPMNCP H  +F    +SYRELP+R
Sbjct: 313 GHLQWYADGMYPPMVLDEVVDADGHVSREGQEYYLKPMNCPFHNLIFRSRGRSYRELPLR 372

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           L+EFGSVYR E SG+L GL RVRG TQDD H++ T +Q+  E     + ++   +D+G  
Sbjct: 373 LSEFGSVYRYEKSGTLSGLTRVRGMTQDDTHIYVTADQVKGELTHSLDFVLQTLRDYGLN 432

Query: 422 KIMVKLSTRPE---KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL----GEGAF 474
              ++LST+ E   K +G D+LW +A   ++ V +           +G+ L    G  AF
Sbjct: 433 DFYLELSTKEEGNPKFIGDDSLWVEATETLREVAEA----------SGLELVPDPGGAAF 482

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK     +DAIGR WQ  TIQ+DFN P RF   Y     EK  PVMIHRA+FGS+ERF
Sbjct: 483 YGPKISVQARDAIGRTWQMSTIQLDFNQPERFELEYTGPDGEKHRPVMIHRALFGSVERF 542

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             I++E++ G  P+WLSP+Q +   + +   +Y Q I   LKS  +  E D  ++ +  K
Sbjct: 543 FAILLEHYAGAFPVWLSPVQVVAVPVAAEYGDYLQGIVADLKSKGVRAEADHSDDRMQKK 602

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           IR H+ +K+P+++I G+++ S  ++  R    T    + + +A+  +T
Sbjct: 603 IRTHTTQKVPLMLIAGEQDRSNGTVSFRFRDGTQLNGIPVDEAVARIT 650


>gi|295396075|ref|ZP_06806258.1| threonine--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030]
 gi|294971016|gb|EFG46908.1| threonine--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030]
          Length = 667

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 239/628 (38%), Positives = 356/628 (56%), Gaps = 49/628 (7%)

Query: 36  KKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           K  +A+ +NG   DL   +  G ++E I   +P  L ++RHSCAH++A+AVQ ++P  ++
Sbjct: 28  KDVIAIRLNGAPADLDRELHAGDTVEPILISEPDGLDILRHSCAHVVAQAVQELYPGSKL 87

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            IGP I DGFYYDF  E+PF+ ++L  IEKK Q I+     F +  +  ++A  +     
Sbjct: 88  GIGPYITDGFYYDFQVEEPFTPEDLKAIEKKAQRIVKEGQTFHRVVVDEDEA--IRREAN 145

Query: 155 EAYKVEILESIP----------AKENVTLY----RQGE--WFDLCRGPHVRSTGQVKKFF 198
           E +K+E+++                 +T+Y    R+GE  W DLCRGPH+ ST  +   F
Sbjct: 146 EPFKLELIQDKGKGAEGASVEVGGSELTVYENRNRKGEVVWQDLCRGPHLPSTKLIGNGF 205

Query: 199 KLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI 258
            + + + AYWRGD +   L R+YGTAW ++ +L  Y   + E+E+RDHR+L  E+DLF  
Sbjct: 206 AVTRASAAYWRGDQDNASLQRVYGTAWASKDDLKAYQVRIAEAERRDHRRLGAELDLFSF 265

Query: 259 AED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
            ++ GSG+  +H KG  I + +  Y+R R I++ +E + TP +  + L+  SGH   Y  
Sbjct: 266 PDELGSGLPVFHPKGGVIKREMEDYVRARHIEEGFEYVGTPHISKEALYYTSGHLPYYGE 325

Query: 317 NMFAVKCADDT-------IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVY 369
           NMF     D+        IK  + + LK MNCP H  ++    +SYR+LP+RL EFG+VY
Sbjct: 326 NMFPAMQVDEQRDENGEIIKQGQPYRLKAMNCPMHNLIYRSRGRSYRDLPLRLFEFGTVY 385

Query: 370 RNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
           RNE SG +HGL RVR  TQDD+H +   E   +E   + + ++S+ +DFG +   ++LST
Sbjct: 386 RNEASGVVHGLTRVRALTQDDSHSYVAVEDAASEIKHLLDFMLSLLRDFGLDDFYLELST 445

Query: 430 R------PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL----GEGAFYGPKF 479
           R        K +GSD  WD+A   ++ V             TG+ L    G  AFYGPK 
Sbjct: 446 RDAVGKKANKFIGSDEQWDEATRTLEEVARA----------TGLELVPDPGGAAFYGPKI 495

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
               +DAIGR WQ  T+Q+DFN P RF+  Y  +   +  PVMIH A FGSIERF+G++ 
Sbjct: 496 SVQARDAIGRTWQMSTVQLDFNQPERFDLEYQAADGSRKRPVMIHSAKFGSIERFLGVLT 555

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E++ G  P+WLSP+QAI+  +    + Y +EIA  LK+H + +E D   +    KIR  S
Sbjct: 556 EHYAGAFPVWLSPVQAIMVPVADEFLPYVEEIAQKLKAHGIRVEIDDSTDRFPKKIRNAS 615

Query: 600 IKKIPIIIICGDKEASERSIGIR-RFGS 626
             K+P  +I G ++    ++  R R GS
Sbjct: 616 KSKVPYTLIAGGEDRDAHAVSFRFRDGS 643


>gi|3617770|emb|CAA74705.1| threonyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 709

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 240/632 (37%), Positives = 369/632 (58%), Gaps = 29/632 (4%)

Query: 1   MPSD-IKLTFPDGSIKNFPV-HATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EG 57
           +P D IK+T PDG++K       T  D+A  IS+ LA  A+  A++  + D++ P+  + 
Sbjct: 70  LPHDPIKVTLPDGNVKEGKKWETTPMDIAAQISKGLANSALISAVDDVLWDMNRPLEGDC 129

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE--DGFYYD-FDKEQPF 114
            +E+   +  +    + HS AHI+ +A++  +   Q+ IGP     +GFYYD F  E   
Sbjct: 130 KLELFKFDSDKGRDTLWHSSAHILGQALEQEYG-CQLCIGPCTTRGEGFYYDGFYGELGL 188

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
           S +    IE    +      PF +  ++ ++A E+F      +KVE++  +PA   +T+Y
Sbjct: 189 SDNHFPSIEAGAAKAAKEAQPFERIEVTKDQALEMFSENN--FKVELINGLPADMTITVY 246

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
           R G   DLCRGPH+ +T  VK F K ++ + AYW+GD +R  L R+YG ++  Q++L +Y
Sbjct: 247 RCGPLVDLCRGPHIPNTSFVKAF-KCLRASSAYWKGDKDRESLQRVYGISYPDQKQLKKY 305

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEE 293
           L FLEE++K DHR L ++ +LF   +   G  F+   G +++  L+ +++ +     Y E
Sbjct: 306 LQFLEEAKKYDHRLLGQKQELFFSHQLSPGSYFFLPLGTRVYNRLMDFIKNQYWHRGYTE 365

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           + TP + +  LWQ SGH D+Y+ NMF          + + F LKPMNCPGH  +F H ++
Sbjct: 366 VITPNMYNMELWQTSGHADNYKDNMFTFNI------EKQEFGLKPMNCPGHCLIFQHRVR 419

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYRELP+RLA+FG ++RNE SG+L GL RVR F QDDAH+FCT EQ+  E   +   I  
Sbjct: 420 SYRELPLRLADFGVLHRNEASGALSGLTRVRRFQQDDAHIFCTTEQVKGEVQGVLEFIDY 479

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL--GE 471
           +YK FGF    +KLSTRPEK +G    WD AE  +K  ++             ++L  G+
Sbjct: 480 VYKVFGF-TYELKLSTRPEKYLGDLETWDKAEADLKEAIEAFGKP--------LVLNEGD 530

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFY-VNSHSEKCHPVMIHRAVFGS 530
           GAFYGPK +  + DA+ R +QC T+Q+DF LP RFN  Y     ++K  PVMIHRAV GS
Sbjct: 531 GAFYGPKIDITVSDAMNRKFQCATLQLDFQLPIRFNLEYAAEDEAKKSRPVMIHRAVLGS 590

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
           +ER   I++E++KG  P W+SP QAIV  I+  + +YA+++   +K     ++ D  +  
Sbjct: 591 VERMFAILLEHYKGKWPFWISPRQAIVCPISEKSQQYAEKVQKQIKDAGFYVDADLTDRK 650

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           I+ K+RE  + +   I++ G+ EA+   + +R
Sbjct: 651 IDKKVREAQLAQYNYILVVGETEAATGQVSVR 682


>gi|152993995|ref|YP_001359716.1| threonyl-tRNA synthetase [Sulfurovum sp. NBC37-1]
 gi|166225510|sp|A6QD00|SYT_SULNB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|151425856|dbj|BAF73359.1| threonyl-tRNA synthetase [Sulfurovum sp. NBC37-1]
          Length = 604

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 230/557 (41%), Positives = 349/557 (62%), Gaps = 19/557 (3%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQ 127
           +SL +IRHS AH+MA+A++ ++P+ Q  +GP++++GFYYDF   +    ++L  IEKKM+
Sbjct: 37  KSLEIIRHSTAHLMAQAIKELYPDAQFFVGPVVDEGFYYDFRVNEKIGEEDLKTIEKKMK 96

Query: 128 EIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPH 187
           E+I +     K  +S ++A + F +  +  K  +L  IP  E V++Y+QG++ DLCRGPH
Sbjct: 97  ELIKKKYKIEKYEISKDEALKKFAN--DDLKQAVLSRIP-DETVSIYKQGDFEDLCRGPH 153

Query: 188 VRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHR 247
           V +   +  F KL +VAGAY  GD N  ML+RIYG A+  ++ L  YL  +EE++KRDHR
Sbjct: 154 VPALRFLHNF-KLTRVAGAYLGGDENAEMLTRIYGIAFADKESLKSYLKMMEEAKKRDHR 212

Query: 248 KLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLW 305
           K+  EM+LF   E+ G+G+ FW  +G K+   L   + +  +  DYE +  P++L   +W
Sbjct: 213 KIGTEMELFMFNEESGAGLPFWMPQGAKLRYKLEQILHKAHLVRDYEPVRGPEILKADMW 272

Query: 306 QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEF 365
           + SGH+  Y  NM+  +       D + + +KPMNC GH+ +F    KSYR+LPV+  E+
Sbjct: 273 RTSGHYACYGENMYLTEI------DGQEYGIKPMNCIGHIQIFKQTQKSYRDLPVKYYEY 326

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
           G V+R+E SG LHGL+RVR FTQDDAH+FC  EQ+ +E L++   + S+ K F FE  M 
Sbjct: 327 GVVHRHEKSGVLHGLLRVREFTQDDAHIFCAPEQIASEVLEVVEFVDSVMKLFEFEYTM- 385

Query: 426 KLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKD 485
           ++ST+PEK +G D +W+ A    +G+ D +K +    +   +  G GAFYGPK +  + D
Sbjct: 386 EISTKPEKAIGDDEVWETA---TQGLKDALKGND---LPYTIDEGGGAFYGPKIDIKITD 439

Query: 486 AIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           AIGR WQCGTIQVDFNLP RF+  YV   + +  PVM+HRA+ GS ERFIGI+ E++ G 
Sbjct: 440 AIGRKWQCGTIQVDFNLPERFDVEYVAEDNSRKRPVMLHRAILGSFERFIGILTEHYAGE 499

Query: 546 LPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPI 605
            P +++P Q I   I+     YA  +   L    +  E   +N+++N +IR    +++P 
Sbjct: 500 FPFFIAPTQVIFVPISEGHAGYAYGLKKKLMLEGIDSEVSDKNDSLNKRIRTAEKQRVPY 559

Query: 606 IIICGDKEASERSIGIR 622
           ++I GD+E    ++ IR
Sbjct: 560 VVIIGDEEVQNNTVAIR 576


>gi|297571384|ref|YP_003697158.1| threonyl-tRNA synthetase [Arcanobacterium haemolyticum DSM 20595]
 gi|296931731|gb|ADH92539.1| threonyl-tRNA synthetase [Arcanobacterium haemolyticum DSM 20595]
          Length = 670

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 244/661 (36%), Positives = 374/661 (56%), Gaps = 53/661 (8%)

Query: 19  VHATGSDVAESISRSLAKKAVAVAINGKV----CDLSDPVREGSIEIITPEDPRSLAVIR 74
           VH   S ++ S   +  +  VA+ ++G +     DL+      ++E +   +P  L ++R
Sbjct: 9   VHECDSPLSGSEFYADQRTIVALRVDGVLKDLDTDLATLADGATVEGVDISEPDGLNILR 68

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDS 134
           HS  H++A+AVQ+ +P+V + IGP I DGFYYDF   +  + + L Q+EK M  I+    
Sbjct: 69  HSATHVLAQAVQNRFPDVNLGIGPFITDGFYYDFGNIESVTPELLKQLEKDMMRIVKEGQ 128

Query: 135 PFLKQYLSHEKARELFESKKEAYKVEILESIPAKE-----------------NVTLY--- 174
            F+++ +S + ARE  E   + YK+E++      +                  +T+Y   
Sbjct: 129 RFVRRPISDDDARE--ELASQPYKLELISLKGGSDADRDQAADGASIEVGGGELTMYDNV 186

Query: 175 -RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQEL 231
            R G+  W DLCRGPH+ ST  +   F L + + AYWRGD     L RIYGTAW ++ EL
Sbjct: 187 RRNGDVVWTDLCRGPHLPSTKLIGNGFALTRSSAAYWRGDQANDSLQRIYGTAWPSKDEL 246

Query: 232 TQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKD 289
             Y   + E+E+RDHRKL  E+DLF   ++ GSG+  +H KG  I   + +Y R+K I+ 
Sbjct: 247 RAYQERIAEAERRDHRKLGSELDLFSFPDEIGSGLAVFHPKGGIIRMEMENYSRQKHIEG 306

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAV------KCADDTI-KDLRTFALKPMNCP 342
           +Y  +NTP +   +L++ SGH D Y   M+        + AD  I K    + LKPMNCP
Sbjct: 307 NYSFVNTPHITKGNLFEVSGHLDFYADGMYPPMHMDEERDADGNITKQGADYYLKPMNCP 366

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN 402
            H  V+    +SYRELP+RL EFG+VYRNE SG +HGL R RGFTQDDAH++CT++QM +
Sbjct: 367 MHNLVYKSRGRSYRELPLRLFEFGTVYRNEASGVVHGLTRARGFTQDDAHIYCTRDQMKD 426

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTR-PEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
           E  ++   ++ + KD+G +   ++LST+ P+K VG D +W+++   ++ V +        
Sbjct: 427 ELTRLLTFVLDLLKDYGLDDFYLELSTKNPKKFVGDDDVWEESTRTLQEVAEA------- 479

Query: 462 RINTGVLL---GEGA-FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK 517
              +G+ L    EGA FYGPK     KDA+GR WQ  TIQ+DFNLP RF+  Y     E+
Sbjct: 480 ---SGLELVPDPEGAAFYGPKISVQAKDALGRTWQMSTIQLDFNLPERFDLEYTGPDGER 536

Query: 518 CHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKS 577
             PVMIHRA+FGSIERF G++ E++ G  P WL+P+Q     +  +  +Y   +A+ L++
Sbjct: 537 HRPVMIHRALFGSIERFFGVLTEHYAGAFPAWLAPVQVRCVPVADAFNDYLDSVADKLRA 596

Query: 578 HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
             + +E D  ++    KIR  S  K+P  +I G ++    ++  R    +    V++ +A
Sbjct: 597 QGVRVEVDKSDDRFPKKIRNASKDKVPFTLIAGGEDMEAGAVSFRMRDGSQDNGVAVDEA 656

Query: 638 I 638
           +
Sbjct: 657 V 657


>gi|30690426|ref|NP_198035.2| threonyl-tRNA synthetase / threonine--tRNA ligase (THRRS)
           [Arabidopsis thaliana]
 gi|27735258|sp|O04630|SYTM_ARATH RecName: Full=Threonyl-tRNA synthetase, mitochondrial; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS; Flags:
           Precursor
 gi|332006227|gb|AED93610.1| threonyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 709

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 240/632 (37%), Positives = 369/632 (58%), Gaps = 29/632 (4%)

Query: 1   MPSD-IKLTFPDGSIKNFPV-HATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EG 57
           +P D IK+T PDG++K       T  D+A  IS+ LA  A+  A++  + D++ P+  + 
Sbjct: 70  LPHDPIKVTLPDGNVKEGKKWETTPMDIAAQISKGLANSALISAVDDVLWDMNRPLEGDC 129

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE--DGFYYD-FDKEQPF 114
            +E+   +  +    + HS AHI+ +A++  +   Q+ IGP     +GFYYD F  E   
Sbjct: 130 KLELFKFDSDKGRDTLWHSSAHILGQALEQEYG-CQLCIGPCTTRGEGFYYDGFYGELGL 188

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
           S +    IE    +      PF +  ++ ++A E+F      +KVE++  +PA   +T+Y
Sbjct: 189 SDNHFPSIEAGAAKAAKEAQPFERIEVTKDQALEMFSENN--FKVELINGLPADMTITVY 246

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
           R G   DLCRGPH+ +T  VK F K ++ + AYW+GD +R  L R+YG ++  Q++L +Y
Sbjct: 247 RCGPLVDLCRGPHIPNTSFVKAF-KCLRASSAYWKGDKDRESLQRVYGISYPDQKQLKKY 305

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEE 293
           L FLEE++K DHR L ++ +LF   +   G  F+   G +++  L+ +++ +     Y E
Sbjct: 306 LQFLEEAKKYDHRLLGQKQELFFSHQLSPGSYFFLPLGTRVYNRLMDFIKNQYWHRGYTE 365

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           + TP + +  LWQ SGH D+Y+ NMF          + + F LKPMNCPGH  +F H ++
Sbjct: 366 VITPNMYNMELWQTSGHADNYKDNMFTFNI------EKQEFGLKPMNCPGHCLIFQHRVR 419

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYRELP+RLA+FG ++RNE SG+L GL RVR F QDDAH+FCT EQ+  E   +   I  
Sbjct: 420 SYRELPMRLADFGVLHRNEASGALSGLTRVRRFQQDDAHIFCTTEQVKGEVQGVLEFIDY 479

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL--GE 471
           +YK FGF    +KLSTRPEK +G    WD AE  +K  ++             ++L  G+
Sbjct: 480 VYKVFGF-TYELKLSTRPEKYLGDLETWDKAEADLKEAIEAFGKP--------LVLNEGD 530

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFY-VNSHSEKCHPVMIHRAVFGS 530
           GAFYGPK +  + DA+ R +QC T+Q+DF LP RFN  Y     ++K  PVMIHRAV GS
Sbjct: 531 GAFYGPKIDITVSDAMNRKFQCATLQLDFQLPIRFNLEYAAEDEAKKSRPVMIHRAVLGS 590

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
           +ER   I++E++KG  P W+SP QAIV  I+  + +YA+++   +K     ++ D  +  
Sbjct: 591 VERMFAILLEHYKGKWPFWISPRQAIVCPISEKSQQYAEKVQKQIKDAGFYVDADLTDRK 650

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           I+ K+RE  + +   I++ G+ EA+   + +R
Sbjct: 651 IDKKVREAQLAQYNYILVVGETEAATGQVSVR 682


>gi|300711550|ref|YP_003737364.1| threonyl-tRNA synthetase [Halalkalicoccus jeotgali B3]
 gi|299125233|gb|ADJ15572.1| threonyl-tRNA synthetase [Halalkalicoccus jeotgali B3]
          Length = 640

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 242/622 (38%), Positives = 366/622 (58%), Gaps = 22/622 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           + +T PDGS       +T  DVA  I   L +  VA  ++G+      P+ ++  IEI+T
Sbjct: 3   VTVTLPDGSELAVEAGSTVEDVAYEIGPGLGRDTVAGVVDGEFVAKEHPIEKDVEIEIVT 62

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
                 L  +RHS AH+ A+A+Q +  E  + IGP  +DGFYYD    +   +D L +I 
Sbjct: 63  ESSDEYLDALRHSAAHVFAQALQRLHSEATLTIGPWTDDGFYYDVTGVELDEAD-LEEIS 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWFDL 182
            + +EII  D P  +  +S E+A E +E     +K EILE   A E+ V+ Y Q E+ DL
Sbjct: 122 AEAEEIIEADLPIERVEMSREEAFEYYEDN--PFKREILEEEAAGEDPVSFYEQAEFRDL 179

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG++  F  L++++GAYWRG  +  ML+R+YGTA+ ++ EL ++L   E+++
Sbjct: 180 CRGPHVASTGEIGGF-ALLEISGAYWRGTEDNEMLTRVYGTAFPSESELEEFLDRREQAK 238

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           +RDHRK+ REMDLF + +   G   +H  G  I + L  Y+R +     YEE+ TP++  
Sbjct: 239 ERDHRKIGREMDLFSVPDHSPGCPHYHPNGMTIRRELEEYIRTQNDALGYEEVRTPELNK 298

Query: 302 QHLWQQSGHWDSYRA-NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           + LW++SGH D + +   F +   ++T      + LKPMNC  H  +++  ++SYR+LPV
Sbjct: 299 KELWEESGHLDFFGSEGEFFLWEENET-----EYGLKPMNCANHAYIYDQQVRSYRDLPV 353

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R +EFG+VYRNE SG L GL+RVRG TQDD H F  ++Q+  E  +   +I  IY+ F F
Sbjct: 354 RFSEFGNVYRNEQSGELSGLLRVRGMTQDDGHAFIRRDQIQTEITETLRVIEEIYEQFDF 413

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           E ++ KL T+ +  VGSD +W +A   ++  L+       + +   V  GE +FYGPK  
Sbjct: 414 E-VLYKLETKGDHAVGSDEVWAEATEALRNALEA------EGLEYDVEEGEASFYGPKIG 466

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
              +D +GR+W  GT+Q+DFN+P R +  Y    +E+  PVM+HRA+ GS ERF+G+MIE
Sbjct: 467 LDARDTLGREWTIGTVQLDFNIPERLDLSYTGEDNEEHRPVMVHRALLGSFERFMGVMIE 526

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +F G  P WL+P Q  +  I+   V YA+EI  +L    + IE   R+ TI  KI+    
Sbjct: 527 HFNGKFPTWLAPEQVRILPISDDNVAYAEEIREVLSDFRVGIED--RSWTIGKKIQTAHD 584

Query: 601 KKIPIIIICGDKEASERSIGIR 622
            ++P ++I G  E +  +I +R
Sbjct: 585 DRVPYMLIVGGNEEAAGTISVR 606


>gi|260578838|ref|ZP_05846745.1| threonine--tRNA ligase [Corynebacterium jeikeium ATCC 43734]
 gi|258603136|gb|EEW16406.1| threonine--tRNA ligase [Corynebacterium jeikeium ATCC 43734]
          Length = 667

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 242/629 (38%), Positives = 357/629 (56%), Gaps = 40/629 (6%)

Query: 45  GKVCDLS-DPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG 103
           G++ DLS  P ++  +  +         VIRHSCAH++A+AVQ  +P  ++ IGP I++G
Sbjct: 26  GQLRDLSWAPQQDVEVAAVPANTDEGRGVIRHSCAHVLAQAVQKEFPGTKLGIGPAIDNG 85

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPF-LKQYLSHEKARELFESKKEAYKVEIL 162
           FYYDF   +PF+ ++L ++EK M++II     F  K Y   E+AR   E   E +K E++
Sbjct: 86  FYYDFQVAEPFTPEDLNKLEKTMKKIIKSGQKFERKAYDDVEQARA--EYADEPFKTELI 143

Query: 163 --------ESIPAKE----NVTLY-----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKV 203
                   +S  A E     +T Y     R GE  W+DLCRGPHV +T  +  F  L + 
Sbjct: 144 ADKGNVDPDSDEATEVGAGELTAYSNVNPRTGEVEWYDLCRGPHVPTTRCIPAF-ALTRS 202

Query: 204 AGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-G 262
           + AYWRGD ++  L RIYGTAW +++ L +Y   + E+EKRDHR+L +E+DLF   ++ G
Sbjct: 203 SAAYWRGDQSKAGLQRIYGTAWESKEALAEYQTMMAEAEKRDHRRLGQELDLFSFPDEIG 262

Query: 263 SGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG   +H  G  +   +  + R R I   Y  +NTP V    L+Q+SGH D Y   MF  
Sbjct: 263 SGFPVFHPDGGIVRLEMEEHSRKRHIASGYSFVNTPHVTKGDLFQKSGHLDFYADGMFPP 322

Query: 322 KCAD-------DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
              D       +  K  + +  KPMNCP H  +F    +SYRELP+RL EFG+VYR E S
Sbjct: 323 MQLDGETDDEGNVTKPAQDYYAKPMNCPMHNLIFASRGRSYRELPLRLFEFGTVYRYEKS 382

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR-PEK 433
           G +HGL R RGFTQDDAH++CT++Q+  E   +   IIS+ +D+G +   ++LST+ P K
Sbjct: 383 GVIHGLTRARGFTQDDAHIYCTEDQLEQELTTVLEFIISLLRDYGLDDFYLELSTKDPNK 442

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
            VGSD +W+ +  I++ V      +++  +         AFYGPK     +DAIGR WQ 
Sbjct: 443 FVGSDEIWERSTEILERV------ATKSGLELVPDPAGAAFYGPKISVQARDAIGRTWQM 496

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI 553
            T+Q+DFNLP RFN  Y      K  P+MIHRA+FGSIERF G+++E++ G  P WL+P 
Sbjct: 497 STVQLDFNLPERFNLEYTAPDGSKQRPIMIHRALFGSIERFFGVLLEHYAGAFPAWLAPH 556

Query: 554 QAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
           Q +   +     EY +  A  L++  +  E D  ++ +  KIR H+  K+P +++ G ++
Sbjct: 557 QVVGIPVADEFNEYLENFAADLRAQGIRAEVDTSDDRMQKKIRNHTTGKVPFMLLVGGRD 616

Query: 614 ASERSIGIRRFGSTTTQKVSLLDAIPILT 642
               ++  R    T    V   DA+ I++
Sbjct: 617 VEANAVSFRFLDGTQVNGVPREDALRIIS 645


>gi|218563696|ref|NP_001116258.1| threonyl-tRNA synthetase, cytoplasmic isoform 1 [Danio rerio]
 gi|158253608|gb|AAI54372.1| Zgc:92586 protein [Danio rerio]
          Length = 718

 Score =  444 bits (1141), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 261/649 (40%), Positives = 371/649 (57%), Gaps = 31/649 (4%)

Query: 5   IKLTFPDGSIKNFPV-HATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEII 62
           IK+T PDG + +      T   VA  IS+ LA   V   +N  V DL  P+ E  S+  +
Sbjct: 78  IKITLPDGKVVDGESWKTTPYQVACGISQGLADNTVISKVNNGVWDLDRPLEEDCSLVFL 137

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQ 121
             +D  + AV  HS AHIM EA++ ++    +  GP IE+GFYYD +   +  SS++   
Sbjct: 138 KFDDEEAQAVYWHSSAHIMGEAMERVYGGC-LCYGPPIENGFYYDMYLDNEGVSSNDFPC 196

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +E   ++II    PF +  +  E   E+F+  K  +K  IL         T+YR G   D
Sbjct: 197 LENLCKKIIKEKQPFERLEVKKETLLEMFKYNK--FKCRILNEKVTTPTTTVYRCGPLID 254

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHVR TG++K   K+ K +  YW G ++   L RIYG ++   + L ++  F EE+
Sbjct: 255 LCRGPHVRHTGKIKAM-KIHKNSSTYWEGKADMESLQRIYGISFPDPKMLKEWEKFQEEA 313

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVL 300
           + RDHRKL RE DLF   +   G  F+  KG  I+ TLI ++R +  K  ++E+ TP + 
Sbjct: 314 KNRDHRKLGREQDLFFFHDLSPGSCFFLPKGAYIYNTLIEFIRSEYRKRGFQEVVTPNIY 373

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  LWQ SGHW  Y  NMF+ +   +       FALKPMNCPGH  +F+H  +S+RELP+
Sbjct: 374 NSKLWQTSGHWQHYSENMFSFEVEKEI------FALKPMNCPGHCLMFDHRPRSWRELPL 427

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLA+FG ++RNE SG+L GL RVR F QDDAH+FC+ +Q+ +E     + + ++Y  FGF
Sbjct: 428 RLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCSMDQIESEIKGCLDFLRTVYDVFGF 487

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL-LGEGAFYGPKF 479
               + LSTRPEK +G   +WD AE         ++NS  D     VL  G+GAFYGPK 
Sbjct: 488 -TFKLNLSTRPEKFLGEPEVWDQAEK-------QLENSLNDFGEKWVLNPGDGAFYGPKI 539

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH--SEKCHPVMIHRAVFGSIERFIGI 537
           +  +KDAIGR  QC TIQ+DF LP RFN  +V SH   +K  PV+IHRA+ GS+ER I I
Sbjct: 540 DIQIKDAIGRYHQCATIQLDFQLPIRFNLTFV-SHDGDDKKRPVIIHRAILGSVERMIAI 598

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE---TINYK 594
           + EN+ G  PLWLSP Q +V  I  +  EYAQ +    + H + + TD   +   T+N K
Sbjct: 599 LTENYGGKWPLWLSPRQVMVVPIGPTCDEYAQRVQK--EFHKVGLMTDVDLDPGCTLNKK 656

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           IR   + +   I++ G+KE S  ++ +R   +    + SL D +  L +
Sbjct: 657 IRNAQLAQYNFILVVGEKEKSSDTVNVRTRDNKVHGERSLTDCMERLKQ 705


>gi|122891384|emb|CAM13348.1| novel prtoein similar to vertebrate threonyl-tRNA synthetase (TARS,
           zgc:92586) [Danio rerio]
          Length = 718

 Score =  444 bits (1141), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 261/649 (40%), Positives = 371/649 (57%), Gaps = 31/649 (4%)

Query: 5   IKLTFPDGSIKNFPV-HATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEII 62
           IK+T PDG + +      T   VA  IS+ LA   V   +N  V DL  P+ E  S+  +
Sbjct: 78  IKITLPDGKVVDGESWKTTPYQVACGISQGLADNTVISKVNNGVWDLDRPLEEDCSLVFL 137

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQ 121
             +D  + AV  HS AHIM EA++ ++    +  GP IE+GFYYD +   +  SS++   
Sbjct: 138 KFDDEEAQAVYWHSSAHIMGEAMERVYGGC-LCYGPPIENGFYYDMYLDNEGVSSNDFPC 196

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +E   ++II    PF +  +  E   E+F+  K  +K  IL         T+YR G   D
Sbjct: 197 LENLCKKIIKEKQPFERLEVKKETLLEMFKYNK--FKCRILNEKVTTPTTTVYRCGPLID 254

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHVR TG++K   K+ K +  YW G ++   L RIYG ++   + L ++  F EE+
Sbjct: 255 LCRGPHVRHTGKIKAM-KIHKNSSTYWEGKADMESLQRIYGISFPDPKMLKEWEKFQEEA 313

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVL 300
           + RDHRKL RE DLF   +   G  F+  KG  I+ TLI ++R +  K  ++E+ TP + 
Sbjct: 314 KNRDHRKLGREQDLFFFHDLSPGSCFFLPKGAYIYNTLIEFIRSEYRKRGFQEVVTPNIY 373

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  LWQ SGHW  Y  NMF+ +   +       FALKPMNCPGH  +F+H  +S+RELP+
Sbjct: 374 NSKLWQTSGHWQHYSENMFSFEVEKEI------FALKPMNCPGHCLMFDHRPRSWRELPL 427

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLA+FG ++RNE SG+L GL RVR F QDDAH+FC+ +Q+ +E     + + ++Y  FGF
Sbjct: 428 RLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCSMDQIESEIKGCLDFLRTVYDVFGF 487

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL-LGEGAFYGPKF 479
               + LSTRPEK +G   +WD AE         ++NS  D     VL  G+GAFYGPK 
Sbjct: 488 -TFKLNLSTRPEKFLGEPEVWDQAEK-------QLENSLNDFGEKWVLNPGDGAFYGPKI 539

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH--SEKCHPVMIHRAVFGSIERFIGI 537
           +  +KDAIGR  QC TIQ+DF LP RFN  +V SH   +K  PV+IHRA+ GS+ER I I
Sbjct: 540 DIQIKDAIGRYHQCATIQLDFQLPIRFNLTFV-SHDGDDKKRPVIIHRAILGSVERMIAI 598

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE---TINYK 594
           + EN+ G  PLWLSP Q +V  I  +  EYAQ +    + H + + TD   +   T+N K
Sbjct: 599 LTENYGGKWPLWLSPRQVMVVPIGPTCDEYAQRVQK--EFHKVGLMTDVDLDPGCTLNKK 656

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           IR   + +   I++ G+KE S  ++ +R   +    + SL D +  L +
Sbjct: 657 IRNAQLAQYNFILVVGEKEKSSDTVNVRTRDNKVHGERSLTDCMERLKQ 705


>gi|225021291|ref|ZP_03710483.1| hypothetical protein CORMATOL_01310 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224946024|gb|EEG27233.1| hypothetical protein CORMATOL_01310 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 700

 Score =  444 bits (1141), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 236/628 (37%), Positives = 355/628 (56%), Gaps = 40/628 (6%)

Query: 45  GKVCDLSD-PVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG 103
           G + DLS  P  +     I        AVIRHSC H++A+AVQ  +P  ++ IGP I++G
Sbjct: 61  GHLKDLSHVPETDAEFLPIPANTAEGRAVIRHSCTHVLAQAVQQEFPGTKLGIGPAIDNG 120

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQ-YLSHEKARELFESKKEAYKVEIL 162
           FYYDFD  +PF+ ++L +IEK+M++II +   F ++ Y    +A E    K E YK+E++
Sbjct: 121 FYYDFDVAEPFTPEDLQRIEKRMKKIIKQGQKFERRVYADQAEAAEAL--KNEPYKLELI 178

Query: 163 ESI----PAKENVTLYRQGE---------------WFDLCRGPHVRSTGQVKKFFKLMKV 203
                  P  +  T    GE               W+DLCRGPHV +T  +  F  L + 
Sbjct: 179 ADKGSVDPQSDEATEVGAGELTGYYNLNPRTKAVEWYDLCRGPHVPTTKYIPAF-ALTRS 237

Query: 204 AGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-G 262
           + AYWRGD     L RIYGTAW +   L +Y + + E+EKRDHR+L +E+DLF   ++ G
Sbjct: 238 SAAYWRGDQANAGLQRIYGTAWESPDALAEYQHKMAEAEKRDHRRLGQELDLFSFPDEIG 297

Query: 263 SGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA- 320
           SG   +H  G  +   +  + RR+ I   Y  +NTP +    L+++SGH D Y   MF  
Sbjct: 298 SGFPVFHPNGGIVRLEMEEHSRRRHIAAGYSFVNTPHLTKGELFEKSGHLDFYADGMFPP 357

Query: 321 ------VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
                 V    +  K    + +KPMNCP H  +F    +SYRELP+RL EFG+VYR E S
Sbjct: 358 MKLDGEVDADGNVTKPAVDYYVKPMNCPMHNLIFASRGRSYRELPLRLFEFGTVYRYEKS 417

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR-PEK 433
           G +HGL R RGFTQDDAH++CT++Q+  E   + + +IS+ +D+G +   ++LST+ PEK
Sbjct: 418 GVIHGLTRARGFTQDDAHIYCTEDQLEAELTSVLDFVISLLRDYGLDDFYLELSTKDPEK 477

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
            VGSD +W+ +  I++ V D    S  D +      G  AFYGPK     +DAIGR WQ 
Sbjct: 478 FVGSDEIWEKSTAILQRVAD---KSGLDLVPDP---GGAAFYGPKISVQARDAIGRTWQM 531

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI 553
            T+Q+DFNLP RF+  Y      K  P+MIHRA+FGSIERF G+++E++ G  P WL+P 
Sbjct: 532 STVQLDFNLPDRFHLEYTAPDGTKKQPIMIHRALFGSIERFFGVLLEHYAGAFPAWLAPQ 591

Query: 554 QAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
           Q +   +  + V + + + N L++  +    D  ++ +  KIR ++  K+P +++ G ++
Sbjct: 592 QVMGIPVADTFVPHLESVINELQARGVRASVDTSDDRMQKKIRTYTQAKVPFMLLAGARD 651

Query: 614 ASERSIGIRRFGSTTTQKVSLLDAIPIL 641
              +++  R    +    V +  AI ++
Sbjct: 652 VEAQAVSFRFLDGSQLNGVPVAQAISLI 679


>gi|15081626|gb|AAK82468.1| AT5g26830/F2P16_90 [Arabidopsis thaliana]
 gi|29028762|gb|AAO64760.1| At5g26830/F2P16_90 [Arabidopsis thaliana]
          Length = 676

 Score =  444 bits (1141), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 240/632 (37%), Positives = 369/632 (58%), Gaps = 29/632 (4%)

Query: 1   MPSD-IKLTFPDGSIKNFPV-HATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EG 57
           +P D IK+T PDG++K       T  D+A  IS+ LA  A+  A++  + D++ P+  + 
Sbjct: 37  LPHDPIKVTLPDGNVKEGKKWETTPMDIAAQISKGLANSALISAVDDVLWDVNRPLEGDC 96

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE--DGFYYD-FDKEQPF 114
            +E+   +  +    + HS AHI+ +A++  +   Q+ IGP     +GFYYD F  E   
Sbjct: 97  KLELFKFDSDKGRDTLWHSSAHILGQALEQEYG-CQLCIGPCTTRGEGFYYDGFYGELGL 155

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
           S +    IE    +      PF +  ++ ++A E+F      +KVE++  +PA   +T+Y
Sbjct: 156 SDNHFPSIEAGAAKAAKEAQPFERIEVTKDQALEMFSENN--FKVELINGLPADMTITVY 213

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
           R G   DLCRGPH+ +T  VK F K ++ + AYW+GD +R  L R+YG ++  Q++L +Y
Sbjct: 214 RCGPLVDLCRGPHIPNTSFVKAF-KCLRASSAYWKGDKDRESLQRVYGISYPDQKQLKKY 272

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEE 293
           L FLEE++K DHR L ++ +LF   +   G  F+   G +++  L+ +++ +     Y E
Sbjct: 273 LQFLEEAKKYDHRLLGQKQELFFSHQLSPGSYFFLPLGTRVYNRLMDFIKNQYWHRGYTE 332

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           + TP + +  LWQ SGH D+Y+ NMF          + + F LKPMNCPGH  +F H ++
Sbjct: 333 VITPNMYNMELWQTSGHADNYKDNMFTFNI------EKQEFGLKPMNCPGHCLIFQHRVR 386

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYRELP+RLA+FG ++RNE SG+L GL RVR F QDDAH+FCT EQ+  E   +   I  
Sbjct: 387 SYRELPMRLADFGVLHRNEASGALSGLTRVRRFQQDDAHIFCTTEQVKGEVQGVLEFIDY 446

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL--GE 471
           +YK FGF    +KLSTRPEK +G    WD AE  +K  ++             ++L  G+
Sbjct: 447 VYKVFGF-TYELKLSTRPEKYLGDLETWDKAEADLKEAIEAFGKP--------LVLNEGD 497

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFY-VNSHSEKCHPVMIHRAVFGS 530
           GAFYGPK +  + DA+ R +QC T+Q+DF LP RFN  Y     ++K  PVMIHRAV GS
Sbjct: 498 GAFYGPKIDITVSDAMNRKFQCATLQLDFQLPIRFNLEYAAEDEAKKSRPVMIHRAVLGS 557

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
           +ER   I++E++KG  P W+SP QAIV  I+  + +YA+++   +K     ++ D  +  
Sbjct: 558 VERMFAILLEHYKGKWPFWISPRQAIVCPISEKSQQYAEKVQKQIKDAGFYVDADLTDRK 617

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           I+ K+RE  + +   I++ G+ EA+   + +R
Sbjct: 618 IDKKVREAQLAQYNYILVVGETEAATGQVSVR 649


>gi|150015183|ref|YP_001307437.1| threonyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
 gi|149901648|gb|ABR32481.1| threonyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
          Length = 643

 Score =  444 bits (1141), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 248/652 (38%), Positives = 367/652 (56%), Gaps = 28/652 (4%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           IK+T  DGSIK F    +  ++A+SIS  LA+ A    +NGKV DL   + E   + I T
Sbjct: 2   IKVTLKDGSIKEFEASLSIYEIAKSISEGLARNACCGIVNGKVEDLRKEINEDVELSICT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +       +RHS +H++A AV+ ++PE ++AIGP I  GFYYDFD+E  F++ +L ++E
Sbjct: 62  FDSQEGKDALRHSISHVLAYAVKRLFPETKLAIGPSIATGFYYDFDRESAFTAADLEKLE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +MQ+II  +    +  L   +A EL   K E YKVE++  +P  E ++ Y+ G++ DLC
Sbjct: 122 AEMQKIIKENPEISRFELPRNEALELM--KDEPYKVELINDLPENEIISFYKMGDFTDLC 179

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+ S   VK   KL + AGAYW+G+    ML+RIYGTA+  + +L  +L  LEE++K
Sbjct: 180 AGPHLMSIKSVKAI-KLTRSAGAYWKGNEKNKMLTRIYGTAFLKKSDLDAFLEALEEAKK 238

Query: 244 RDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKDDYEE-----INTP 297
           RDH KL RE+ LF   E+ G G+     KG KI Q L    +R ++D+ E+       TP
Sbjct: 239 RDHNKLGRELKLFTTDENVGQGLPLLMPKGAKIVQLL----QRWVEDEEEKRGYLLTKTP 294

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    L++ SGHWD Y+  MF +    D  KD   FAL+PM CP    ++N    SYR+
Sbjct: 295 LMAKSDLYKISGHWDHYKDGMFVL---GDEEKDDEVFALRPMTCPFQYTIYNAEQHSYRD 351

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R  E  +++RNE SG +HGL+RVR FT  D H+  T EQ+  E   +  LI  +   
Sbjct: 352 LPLRYGETSTLFRNEASGEMHGLIRVRQFTLADGHLVVTPEQLEEEFKGVLELIQYLMGT 411

Query: 418 FGF-EKIMVKLS----TRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
            G  EKI  + S       EK +     W+  ++ M+ +LD +       IN      E 
Sbjct: 412 LGIAEKITYRFSKWDPNNTEKYINDPDAWNKTQDTMRNILDHLN------INYVEADDEA 465

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           AFYGPK +   ++  G++    T+Q+DF L  RF+  YV+   EK  P +IHR+  G  E
Sbjct: 466 AFYGPKLDLQFRNVHGKEDTLFTVQIDFALAERFDMSYVDKDGEKKRPYIIHRSSIGCYE 525

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
           R + ++IE + G  P WLSP+QA V  I+    +YA+ +   LK+  + +ETD+R E I 
Sbjct: 526 RTLAMLIEEYAGAFPTWLSPVQAKVLPISDKYNDYAEAVTKALKNKGIRVETDYRAEKIG 585

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           YKIRE  +++ P I++ G+KEA+   + +R   +     V L   I  + KE
Sbjct: 586 YKIREARLERTPYILVVGEKEAANNEVSVRSRKNDDEGAVKLDAFIERIVKE 637


>gi|325997000|gb|ADZ49208.1| Threonyl-tRNA synthetase [Helicobacter pylori 2017]
          Length = 573

 Score =  443 bits (1140), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 230/568 (40%), Positives = 345/568 (60%), Gaps = 35/568 (6%)

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           + P +L VIRHSCAH++A+++++++P+ +  +GP++E+GFYYDF      S ++L +IE 
Sbjct: 3   DSPLALEVIRHSCAHLLAQSLKALYPDAKFFVGPVVEEGFYYDFKTSSKISEEDLPKIEA 62

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
           KM+E         K+ L+ E+A E F  K +  K  ++  I   +   +Y+QGE+ DLC+
Sbjct: 63  KMKEFAKLKLAIAKEILTREQALERF--KGDELKHAVMSKISG-DIFGVYKQGEFEDLCK 119

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPH+ +T +    FKL K+AGAY  GD N  ML RIYG A+ T++ L  YL+ +EE++KR
Sbjct: 120 GPHLPNT-RFLNHFKLTKLAGAYLGGDENNEMLIRIYGIAFATKEGLKDYLFQIEEAKKR 178

Query: 245 DHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD---------DYEEI 294
           DHRKL  E+ LF   ++ G+G+  W  KG +        +R++I+D          YE +
Sbjct: 179 DHRKLGVELGLFSFDDEIGAGLPLWLPKGAR--------LRKRIEDLLSKALLLRGYEPV 230

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
             P++L   +W+ SGH+D+Y+ NM+       T  D + + +KPMNC GH+ V+   L S
Sbjct: 231 KGPEILKSDVWKISGHYDNYKENMYF------TTIDEQEYGIKPMNCVGHIKVYQSALHS 284

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YR+LP+R  E+G V+R+E SG LHGL+RVR FTQDDAH+FC+ EQ+ +E   I +    I
Sbjct: 285 YRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDAHIFCSFEQIQSEVSAILDFTHKI 344

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            K F F   M +LSTRP K +G D +W+ A N +K  L       + RI+  +  G GAF
Sbjct: 345 MKAFDFSYEM-ELSTRPAKSIGDDEVWEKATNALKEAL------KEHRIDYKIDEGGGAF 397

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  + DA+ R WQCGTIQVD NLP RF   + N  +    PVMIHRA+ GS ERF
Sbjct: 398 YGPKIDIKITDALKRKWQCGTIQVDMNLPERFKLAFTNERNHAEQPVMIHRAILGSFERF 457

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
           I I+ E+F GN P +++P Q  +  I      +A ++   LK   + +E   +N+++N K
Sbjct: 458 IAILSEHFGGNFPFFVAPTQIALIPINEEHHVFALKLKEELKKRDIFVEVLDKNDSLNKK 517

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIR 622
           +R    +KIP+I++ G++E     + IR
Sbjct: 518 VRLAEKQKIPMILVLGNEEVETEILSIR 545


>gi|297808713|ref|XP_002872240.1| AT5g26830/F2P16_90 [Arabidopsis lyrata subsp. lyrata]
 gi|297318077|gb|EFH48499.1| AT5g26830/F2P16_90 [Arabidopsis lyrata subsp. lyrata]
          Length = 713

 Score =  443 bits (1140), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 244/648 (37%), Positives = 375/648 (57%), Gaps = 29/648 (4%)

Query: 1   MPSD-IKLTFPDGSIKNFPV-HATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EG 57
           +P D IK+T PDG++K       T  D+A  IS+ LA  A+  A++  + D+S P+  + 
Sbjct: 74  LPHDPIKITLPDGNVKEGKKWETTPIDIAAQISKGLANSALISAVDDVLWDMSRPLEGDC 133

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE--DGFYYD-FDKEQPF 114
            +E+   +  +    + HS AHI+ +A++  +   Q+ IGP     +GFYYD F  E   
Sbjct: 134 KLELFKFDSDKGRDTLWHSSAHILGQALEQEYG-CQLCIGPCTTRGEGFYYDGFYGELGL 192

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
           S +    IE    +      PF +  ++ ++A E+F      +KVEI+  +PA + +T+Y
Sbjct: 193 SENHFPNIEAGAAKAAKEAQPFERIEVTKDQALEMFSENN--FKVEIINDLPADKTITVY 250

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
           R G   DLCRGPH+ +T  VK F K ++ + AYWRG+  R  L R+YG ++  Q++L +Y
Sbjct: 251 RCGPLVDLCRGPHIPNTSFVKAF-KCLRASSAYWRGNKERESLQRVYGISYPDQKQLKKY 309

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEE 293
           L FLEE++K DHR L ++ +LF   +   G  F+   G +++  L+ +++++  +  Y E
Sbjct: 310 LQFLEEAKKYDHRLLGQKQELFFSHQLSPGSYFFLPLGTRVYNRLMDFIKKQYWQRGYTE 369

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           + TP + +  LW+ SGH D+Y+ NMF          + + F LKPMNCPGH  +F H ++
Sbjct: 370 VITPNMYNMALWETSGHADNYKDNMFTFNI------EKQEFGLKPMNCPGHCLIFQHRVR 423

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYRELP+RLA+FG ++RNE SG+L GL RVR F QDDAH+FCT EQ+  E   +   I  
Sbjct: 424 SYRELPMRLADFGVLHRNEASGALSGLTRVRRFQQDDAHIFCTTEQVKEEVQGVLEFIDY 483

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL--GE 471
           +YK FGF    +KLSTRPEK +G    WD AE  +K  ++             ++L  G+
Sbjct: 484 VYKVFGF-TYELKLSTRPEKYLGELETWDKAEADLKEAIEAFGKP--------LVLNEGD 534

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFY-VNSHSEKCHPVMIHRAVFGS 530
           GAFYGPK +  + DA+ R +QC T+Q+DF LP RFN  Y     ++K  PVMIHRAV GS
Sbjct: 535 GAFYGPKIDITVSDAMNRKFQCATLQLDFQLPIRFNLEYAAEDEAKKAKPVMIHRAVLGS 594

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
           +ER   I++E++KG  P W+SP QAIV  I+  + +YA+++   +      I+ D  +  
Sbjct: 595 VERMFAILLEHYKGKWPFWISPRQAIVCPISEKSQKYAEKVQKEIHDAGFYIDADLTDRK 654

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           I+ K+RE  + +   I++ G+ EA+   + +R   S      S+ D +
Sbjct: 655 IDKKVREAQLAQYNYILVVGETEAATGQVSVRLRDSAAHSVKSIEDLL 702


>gi|172040605|ref|YP_001800319.1| threonyl-tRNA synthetase [Corynebacterium urealyticum DSM 7109]
 gi|171851909|emb|CAQ04885.1| unnamed protein product [Corynebacterium urealyticum DSM 7109]
          Length = 662

 Score =  443 bits (1140), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 241/628 (38%), Positives = 359/628 (57%), Gaps = 48/628 (7%)

Query: 45  GKVCDLS-DPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG 103
           G + DL+  P  +  +  I  +      VIRHS AH++A+AVQ ++P  ++ IGP I+ G
Sbjct: 22  GNLRDLAWAPEVDTEVTAIASDTEEGRGVIRHSTAHVLAQAVQRVFPGTKLGIGPAIDGG 81

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPF-LKQYLSHEKARELFESKKEAYKVEIL 162
           FYYDFD  +PF+ ++L +IE++M++II     F  K Y S+++AR   E   E YK+E++
Sbjct: 82  FYYDFDVAEPFTPEDLKKIEREMKKIIKSGQRFERKAYSSNDEART--EYAAEPYKLELI 139

Query: 163 ES----IPAKEN--------VTLY-----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKV 203
           E      P  E         +T Y     R GE  W+DLCRGPHV +T  +  F  + + 
Sbjct: 140 EDKGNVAPDSEEAMEVGAGELTAYSNVNPRTGEVEWYDLCRGPHVPTTRYIPAF-AITRS 198

Query: 204 AGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-G 262
           + AYWRGD +   L RIYGTAW ++++L +Y + LEE+EKRDHR+L  E+DLF   ++ G
Sbjct: 199 SAAYWRGDQDNAGLQRIYGTAWESKEKLAEYQHMLEEAEKRDHRRLGAELDLFSFPDEVG 258

Query: 263 SGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG   +H  G  +   +  + RR+ +   Y  +NTP +    L+Q+SGH D Y   MF  
Sbjct: 259 SGFPVFHPNGGIVRLEMEEHSRRRHLASGYSFVNTPHITKGDLFQKSGHLDFYAEGMFPP 318

Query: 322 KCAD-------DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
              D       +  K  + +  KPMNCP H  +F    +SYRELP+RL EFG+VYR E S
Sbjct: 319 MQLDGETDEEGNVTKPGQDYYAKPMNCPMHNLIFASRGRSYRELPLRLFEFGTVYRYEKS 378

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR-PEK 433
           G +HGL R RGFTQDDAH++CT++Q+ +E   +   IIS+ +D+G +   ++LST+ P+K
Sbjct: 379 GVVHGLTRARGFTQDDAHIYCTEDQLEDELTTVLEFIISLLRDYGLDDFYLELSTKDPKK 438

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL----GEGAFYGPKFEYILKDAIGR 489
            VG+D +W+ +  I++ V +           +G+ L       AFYGPK     +DAIGR
Sbjct: 439 FVGTDEIWERSTEILQRVAE----------KSGLELVPDPAGAAFYGPKISVQARDAIGR 488

Query: 490 DWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW 549
            WQ  T+Q+DFNLP RF+  Y      K  P+MIHRA+FGSIERF G+++E++ G  P W
Sbjct: 489 TWQMSTVQLDFNLPERFDLEYTAPDGTKKRPIMIHRALFGSIERFFGVLLEHYAGAFPAW 548

Query: 550 LSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIIC 609
           L+P Q +   +     EY +E    L+   +  E D  ++ +  KIR H+  KIP +++ 
Sbjct: 549 LAPHQVMGIPVAEDFTEYLEEFVADLRKDGIRAEVDTSDDRMQKKIRTHTKGKIPFMLLV 608

Query: 610 GDKEASERSIGIRRFGSTTTQKVSLLDA 637
           G ++    ++  R    T    V   +A
Sbjct: 609 GGRDVENGAVSFRFHDGTQVNGVPREEA 636


>gi|219849385|ref|YP_002463818.1| threonyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
 gi|219543644|gb|ACL25382.1| threonyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
          Length = 594

 Score =  443 bits (1140), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 234/597 (39%), Positives = 365/597 (61%), Gaps = 39/597 (6%)

Query: 64  PEDPRS--LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           P DP+S     +RHS AH+MA+AV  I+P+ ++AIGP IE+GFYYDFD  +P + ++L +
Sbjct: 2   PVDPKSDPYYRLRHSLAHVMAQAVLEIFPDAKIAIGPPIENGFYYDFDLPRPLTPEDLTE 61

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN----------- 170
           IEK+M+ IIA + PF+ + ++ E+AR++F +  + YK+E++E +    +           
Sbjct: 62  IEKRMKRIIAGNHPFIYREVTAEEARQIFAN--QPYKLELIEGLAKGLDEYGETHHGDTV 119

Query: 171 VTLYRQGEWFDLCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQ 229
           ++ YRQ  + DLCRGPH+  TG++  + FKLM +AGAYWRGD     L RIYGT WNT++
Sbjct: 120 ISTYRQDTFEDLCRGPHLNHTGEINPEAFKLMSIAGAYWRGDEKNRQLQRIYGTGWNTKE 179

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KI 287
           EL  YL+ LEES +RDHR+L +E+ LF  ++D G G+  +  KG  I   +  ++R  + 
Sbjct: 180 ELEAYLHRLEESRRRDHRRLGKELGLFFFSDDIGPGLPIFSPKGEIIRHEMEKFVREVQT 239

Query: 288 KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
           +  Y+ + T  V+ + L+++SGH+D+YR +MF      + +     F LKPMNCP H+ +
Sbjct: 240 RYGYQHVWTGNVVKEQLYRKSGHYDNYRDSMFPPMVESEDL----IFRLKPMNCPSHMTL 295

Query: 348 FNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM---FNE 403
           +N  G+ SYR+LP+R AEF ++YR E SG+L GL RVR  TQDD H+FC  +Q+   F+ 
Sbjct: 296 YNQLGVISYRDLPLRFAEFATLYRYEDSGALSGLTRVRALTQDDCHIFCRPDQIQEEFSL 355

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            L++   ++  YK F   K+ + L  +  K V  D  W+ A   ++           + +
Sbjct: 356 ALQVIREVLGTYK-FTDYKVRLSLRGKEGKYVQDDEKWELATAALR------AALEANGV 408

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
                 GE AFYGPK +++ +D +GR+WQ  TIQVDF  P+R    Y+    +   PV++
Sbjct: 409 EYFEAEGEAAFYGPKADFLARDVLGREWQLSTIQVDFIQPARLGCEYIGEDDKPHTPVVL 468

Query: 524 HRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIE 583
           HRAV G+ ERF+GI+IE++ G  PLWL+P+QA++  IT   +EYA+++   L +  L +E
Sbjct: 469 HRAVTGTTERFMGILIEHYAGAFPLWLAPVQAVIIPITDKQMEYARKVRQRLFAAGLRVE 528

Query: 584 TDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
            D   + +  KIR   ++KIP ++I G +E S  ++ +R      T+    L A+P+
Sbjct: 529 LDENRDRMQGKIRRAQLQKIPYMLIIGAREESADAVAVR------TRAGDDLGAMPV 579


>gi|73919784|sp|Q8FPJ3|SYT_COREF RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
          Length = 694

 Score =  443 bits (1139), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 241/631 (38%), Positives = 362/631 (57%), Gaps = 44/631 (6%)

Query: 45  GKVCDLSDPVREGSIEIITP---EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE 101
           G++ DLS    E +     P   ED R  AVIRHSCAH++A+AVQ+ +P  ++ IGP IE
Sbjct: 55  GQLKDLSHVPEETATFTAVPANSEDGR--AVIRHSCAHVLAQAVQAEFPGTKLGIGPAIE 112

Query: 102 DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEI 161
           +GFYYDFD  +PF+ ++L  IEK+M++II     F ++ +         E   E YK+E+
Sbjct: 113 NGFYYDFDVAEPFTPEDLKTIEKRMKKIIKTGQKFERR-VYESTEAAAAELADEPYKLEL 171

Query: 162 LES------------------IPAKENVT-LYRQGEWFDLCRGPHVRSTGQVKKFFKLMK 202
           ++                   + A +NV     + EW DLCRGPH+ +T  +  F  L +
Sbjct: 172 IQDKGNVDPDSDEATEVGAGELTAYDNVNPRTNEVEWSDLCRGPHIPTTRYIPAF-ALTR 230

Query: 203 VAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED- 261
            + AYWRGD     L RIYGTAW ++++L +Y   L E+EKRDHR+L  E+DLF   ++ 
Sbjct: 231 SSAAYWRGDQTNAGLQRIYGTAWESKEKLDEYQTMLAEAEKRDHRRLGTELDLFSFPDEI 290

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           GSG+  +H  G  +   +  + RR+ I+  Y  +NTP      L+++SGH   Y+  MF 
Sbjct: 291 GSGLPVFHPNGAIVRLEMEEHSRRRHIQAGYSFVNTPHATKSDLFEKSGHLGFYKEGMFP 350

Query: 321 VKCAD-------DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP 373
               D       +  K  + + LKPMNCP H  +F+   +SYRELP+RL EFG+VYR E 
Sbjct: 351 PLQLDAEYDAEGNQTKPGQDYYLKPMNCPMHNLIFDSRGRSYRELPLRLFEFGTVYRYEK 410

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR-PE 432
           SG +HGL R RGFTQDDAH++CT++Q+  E   +   IIS+ KD+G +   ++LST+ P+
Sbjct: 411 SGVVHGLTRARGFTQDDAHIYCTEDQLEEELTSVLEFIISLLKDYGLDDFYLELSTKDPK 470

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA-FYGPKFEYILKDAIGRDW 491
           K VG D +W+ +  I++ V     NS  D +       EGA FYGPK     KDAIGR W
Sbjct: 471 KFVGDDEIWERSTEILQRV---ATNSGLDLVPDP----EGAAFYGPKISVQAKDAIGRTW 523

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLS 551
           Q  T+Q+DFNLP RF   Y +    K  P+MIHRA+FGSIERF G+++E++ G  P WL+
Sbjct: 524 QMSTVQLDFNLPERFELEYTSPDGSKQRPIMIHRALFGSIERFFGVLLEHYAGAFPAWLA 583

Query: 552 PIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
           P Q +   +    + + +++ + L++     E D  ++ +  KIR H+  KIP +++ G 
Sbjct: 584 PHQVVGIPVAEDFIPHLEKVVDKLRARGFRAEVDTSDDRMQKKIRTHTTGKIPFMLLAGG 643

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           ++    ++  R    T    V + +A+ +++
Sbjct: 644 RDVEADAVSFRFLDGTQVNGVPVDEAVELIS 674


>gi|315503148|ref|YP_004082035.1| threonyl-tRNA synthetase [Micromonospora sp. L5]
 gi|315409767|gb|ADU07884.1| threonyl-tRNA synthetase [Micromonospora sp. L5]
          Length = 671

 Score =  443 bits (1139), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 243/634 (38%), Positives = 365/634 (57%), Gaps = 50/634 (7%)

Query: 37  KAVAVAIN--GKVCDLS-DPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQ 93
           KA+ V  +  G++ DL   P  + ++E +T + P  L V+RHS AH++A+AVQ ++P+ +
Sbjct: 36  KAIVVVRDPQGQLRDLDWRPAEDVAVEPVTLDSPDGLNVLRHSTAHVLAQAVQDVFPDAK 95

Query: 94  VAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSH-EKARELFES 152
           + IGP IE+GFYYDF  ++PF  D+L ++EK+MQEI+     F ++  +  ++AR   E 
Sbjct: 96  LGIGPPIENGFYYDFGVDKPFQPDDLTKLEKRMQEIVKSGQRFRRRRFADLDEARS--EL 153

Query: 153 KKEAYKVEILE----SIPAKE-------NVTLYRQGE-------WFDLCRGPHVRSTGQV 194
             E YK+E++E     + + E        +T+Y           W DLCRGPH+ +T ++
Sbjct: 154 AAEPYKLELIEVKGEGLDSSEVMEVGGGELTIYDNLAANEDKVCWSDLCRGPHLPNT-RL 212

Query: 195 KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMD 254
              FKLM+ A AYWRG    P L R+YGTAW T+ EL  YL  LEE+ +RDHRKL  ++D
Sbjct: 213 IGAFKLMRSAAAYWRGSEKNPQLQRVYGTAWPTRDELKAYLKLLEEAARRDHRKLGADLD 272

Query: 255 LFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWD 312
           LF   ++ GSG+  +H KG  + + +  Y+R R +++ ++ + TP +  + L+  SGH  
Sbjct: 273 LFSFPDEIGSGLPVFHPKGGVLKRVMEDYVRARHVEEGFDYVGTPHISKEGLFHTSGHLP 332

Query: 313 SYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE 372
            Y+  MF     + +      + LK MNCP H  ++    +SYR+LP+RL EFG+VYR E
Sbjct: 333 YYKDTMFPPMEMEGS-----DYYLKAMNCPMHNLIYRSRGRSYRQLPIRLFEFGTVYRYE 387

Query: 373 PSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR-- 430
            SG +HGL RVRGFTQDD+H +CT+EQ  +E   +   ++S+ +DFG +   ++LSTR  
Sbjct: 388 KSGVIHGLTRVRGFTQDDSHSYCTREQAPSEIKHLLGFVLSLLRDFGIDDFYLELSTRDE 447

Query: 431 --PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL----GEGAFYGPKFEYILK 484
             P+K VGSD  W  A  +++          Q  + TG+ L    G  AFYGPK     K
Sbjct: 448 SKPDKFVGSDEDWATATAVLE----------QCALETGLELVPDPGGAAFYGPKISVQAK 497

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           DAIGR WQ  TIQ DFN P  F   Y  +   +  PVMIH A FGSIERFIG++ E++ G
Sbjct: 498 DAIGRTWQMSTIQYDFNQPKGFGLEYQAADGTRQQPVMIHCAKFGSIERFIGVLTEHYAG 557

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P WL+P+Q +   I     +Y  + A  L+ H +  E D  ++ +  KIR    +KIP
Sbjct: 558 AFPAWLAPVQVVGIPIRDEHGDYLVDFAATLRRHGVRAEVDLGDDRMQKKIRNAQQQKIP 617

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
            ++I GD + +  ++  R    +    V + +A+
Sbjct: 618 FMVIAGDDDVAAGTVSFRYRDGSQRNGVPVDEAV 651


>gi|25028341|ref|NP_738395.1| threonyl-tRNA synthetase [Corynebacterium efficiens YS-314]
 gi|23493626|dbj|BAC18595.1| putative threonyl-tRNA synthetase [Corynebacterium efficiens
           YS-314]
          Length = 720

 Score =  443 bits (1139), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 241/631 (38%), Positives = 362/631 (57%), Gaps = 44/631 (6%)

Query: 45  GKVCDLSDPVREGSIEIITP---EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE 101
           G++ DLS    E +     P   ED R  AVIRHSCAH++A+AVQ+ +P  ++ IGP IE
Sbjct: 81  GQLKDLSHVPEETATFTAVPANSEDGR--AVIRHSCAHVLAQAVQAEFPGTKLGIGPAIE 138

Query: 102 DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEI 161
           +GFYYDFD  +PF+ ++L  IEK+M++II     F ++ +         E   E YK+E+
Sbjct: 139 NGFYYDFDVAEPFTPEDLKTIEKRMKKIIKTGQKFERR-VYESTEAAAAELADEPYKLEL 197

Query: 162 LES------------------IPAKENVT-LYRQGEWFDLCRGPHVRSTGQVKKFFKLMK 202
           ++                   + A +NV     + EW DLCRGPH+ +T  +  F  L +
Sbjct: 198 IQDKGNVDPDSDEATEVGAGELTAYDNVNPRTNEVEWSDLCRGPHIPTTRYIPAF-ALTR 256

Query: 203 VAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED- 261
            + AYWRGD     L RIYGTAW ++++L +Y   L E+EKRDHR+L  E+DLF   ++ 
Sbjct: 257 SSAAYWRGDQTNAGLQRIYGTAWESKEKLDEYQTMLAEAEKRDHRRLGTELDLFSFPDEI 316

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           GSG+  +H  G  +   +  + RR+ I+  Y  +NTP      L+++SGH   Y+  MF 
Sbjct: 317 GSGLPVFHPNGAIVRLEMEEHSRRRHIQAGYSFVNTPHATKSDLFEKSGHLGFYKEGMFP 376

Query: 321 VKCAD-------DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP 373
               D       +  K  + + LKPMNCP H  +F+   +SYRELP+RL EFG+VYR E 
Sbjct: 377 PLQLDAEYDAEGNQTKPGQDYYLKPMNCPMHNLIFDSRGRSYRELPLRLFEFGTVYRYEK 436

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR-PE 432
           SG +HGL R RGFTQDDAH++CT++Q+  E   +   IIS+ KD+G +   ++LST+ P+
Sbjct: 437 SGVVHGLTRARGFTQDDAHIYCTEDQLEEELTSVLEFIISLLKDYGLDDFYLELSTKDPK 496

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA-FYGPKFEYILKDAIGRDW 491
           K VG D +W+ +  I++ V     NS  D +       EGA FYGPK     KDAIGR W
Sbjct: 497 KFVGDDEIWERSTEILQRV---ATNSGLDLVPDP----EGAAFYGPKISVQAKDAIGRTW 549

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLS 551
           Q  T+Q+DFNLP RF   Y +    K  P+MIHRA+FGSIERF G+++E++ G  P WL+
Sbjct: 550 QMSTVQLDFNLPERFELEYTSPDGSKQRPIMIHRALFGSIERFFGVLLEHYAGAFPAWLA 609

Query: 552 PIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
           P Q +   +    + + +++ + L++     E D  ++ +  KIR H+  KIP +++ G 
Sbjct: 610 PHQVVGIPVAEDFIPHLEKVVDKLRARGFRAEVDTSDDRMQKKIRTHTTGKIPFMLLAGG 669

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           ++    ++  R    T    V + +A+ +++
Sbjct: 670 RDVEADAVSFRFLDGTQVNGVPVDEAVELIS 700


>gi|259507396|ref|ZP_05750296.1| threonine--tRNA ligase [Corynebacterium efficiens YS-314]
 gi|259165021|gb|EEW49575.1| threonine--tRNA ligase [Corynebacterium efficiens YS-314]
          Length = 699

 Score =  442 bits (1138), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 241/631 (38%), Positives = 362/631 (57%), Gaps = 44/631 (6%)

Query: 45  GKVCDLSDPVREGSIEIITP---EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE 101
           G++ DLS    E +     P   ED R  AVIRHSCAH++A+AVQ+ +P  ++ IGP IE
Sbjct: 60  GQLKDLSHVPEETATFTAVPANSEDGR--AVIRHSCAHVLAQAVQAEFPGTKLGIGPAIE 117

Query: 102 DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEI 161
           +GFYYDFD  +PF+ ++L  IEK+M++II     F ++ +         E   E YK+E+
Sbjct: 118 NGFYYDFDVAEPFTPEDLKTIEKRMKKIIKTGQKFERR-VYESTEAAAAELADEPYKLEL 176

Query: 162 LES------------------IPAKENVT-LYRQGEWFDLCRGPHVRSTGQVKKFFKLMK 202
           ++                   + A +NV     + EW DLCRGPH+ +T  +  F  L +
Sbjct: 177 IQDKGNVDPDSDEATEVGAGELTAYDNVNPRTNEVEWSDLCRGPHIPTTRYIPAF-ALTR 235

Query: 203 VAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED- 261
            + AYWRGD     L RIYGTAW ++++L +Y   L E+EKRDHR+L  E+DLF   ++ 
Sbjct: 236 SSAAYWRGDQTNAGLQRIYGTAWESKEKLDEYQTMLAEAEKRDHRRLGTELDLFSFPDEI 295

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           GSG+  +H  G  +   +  + RR+ I+  Y  +NTP      L+++SGH   Y+  MF 
Sbjct: 296 GSGLPVFHPNGAIVRLEMEEHSRRRHIQAGYSFVNTPHATKSDLFEKSGHLGFYKEGMFP 355

Query: 321 VKCAD-------DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP 373
               D       +  K  + + LKPMNCP H  +F+   +SYRELP+RL EFG+VYR E 
Sbjct: 356 PLQLDAEYDAEGNQTKPGQDYYLKPMNCPMHNLIFDSRGRSYRELPLRLFEFGTVYRYEK 415

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR-PE 432
           SG +HGL R RGFTQDDAH++CT++Q+  E   +   IIS+ KD+G +   ++LST+ P+
Sbjct: 416 SGVVHGLTRARGFTQDDAHIYCTEDQLEEELTSVLEFIISLLKDYGLDDFYLELSTKDPK 475

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA-FYGPKFEYILKDAIGRDW 491
           K VG D +W+ +  I++ V     NS  D +       EGA FYGPK     KDAIGR W
Sbjct: 476 KFVGDDEIWERSTEILQRV---ATNSGLDLVPDP----EGAAFYGPKISVQAKDAIGRTW 528

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLS 551
           Q  T+Q+DFNLP RF   Y +    K  P+MIHRA+FGSIERF G+++E++ G  P WL+
Sbjct: 529 QMSTVQLDFNLPERFELEYTSPDGSKQRPIMIHRALFGSIERFFGVLLEHYAGAFPAWLA 588

Query: 552 PIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
           P Q +   +    + + +++ + L++     E D  ++ +  KIR H+  KIP +++ G 
Sbjct: 589 PHQVVGIPVAEDFIPHLEKVVDKLRARGFRAEVDTSDDRMQKKIRTHTTGKIPFMLLAGG 648

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           ++    ++  R    T    V + +A+ +++
Sbjct: 649 RDVEADAVSFRFLDGTQVNGVPVDEAVELIS 679


>gi|195443008|ref|XP_002069231.1| GK21088 [Drosophila willistoni]
 gi|194165316|gb|EDW80217.1| GK21088 [Drosophila willistoni]
          Length = 699

 Score =  442 bits (1137), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 247/645 (38%), Positives = 370/645 (57%), Gaps = 24/645 (3%)

Query: 5   IKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS--IEI 61
           IK+T PDG  +      +T  D+A  IS+ LA   V   +NG+V DL D V EG+  +++
Sbjct: 61  IKVTLPDGKQVDATSWESTPYDIACVISKGLADNTVISKVNGEVWDL-DRVLEGNCKLQL 119

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELA 120
           +  +DP + AV  HS AHIM EA++ ++    +  GP I+ GFYYD   + +  S+++  
Sbjct: 120 LKFDDPEAQAVFWHSSAHIMGEAMERLYGG-HLCYGPPIDGGFYYDMHLDGEGISTNDYG 178

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            +E  +++I+     F +  +      E+F  K   +KV IL      +  T+Y+ G   
Sbjct: 179 AMESLVKQIVKEKQIFERLEMKKSDLLEMF--KYNEFKVRILNEKVTSDRTTVYKCGSLI 236

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHVR+TG+VK   K+ K +  YW G ++   L R+YG ++   ++L ++    EE
Sbjct: 237 DLCRGPHVRNTGKVKAL-KITKNSSTYWEGKADAESLQRVYGISFPDPKQLKEWEKLQEE 295

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQV 299
           + KRDHRK+ RE +LF   E   G  F+  +G  I+ TL+++M+ +  K  ++E+ +P +
Sbjct: 296 AAKRDHRKIGREQELFFFHELSPGSCFFQPRGAHIYNTLMNFMKAEYRKRGFQEVISPNI 355

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +  LW  SGHW  Y  NMF+ +   +       FALKPMNCPGH  +F++  +S+RELP
Sbjct: 356 YNAKLWMTSGHWQHYAENMFSFEVEKEK------FALKPMNCPGHCLIFDNRNRSWRELP 409

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+A+FG ++RNE SG+L GL RVR F QDDAH+FCT +Q+ +E     + +  +Y  FG
Sbjct: 410 LRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCTPDQIKSEMKGCLDFLHHVYNIFG 469

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F   +V LSTRPEK +G    W+DAE  +   LD      ++        G+GAFYGPK 
Sbjct: 470 FSFQLV-LSTRPEKYLGELEQWNDAEKALAESLDEFGIPWKENP------GDGAFYGPKI 522

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +  + DA+ R  QC TIQ+DF LP RFN  Y+    EK  PV+IHRA+ GS+ER I I+ 
Sbjct: 523 DITIMDALKRAHQCATIQLDFQLPIRFNLNYIADDGEKKRPVIIHRAILGSVERMIAILT 582

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF-RNETINYKIREH 598
           EN+ G  P WLSP Q +V  +  +  EYAQ +   L +     E D    +T+N KIR  
Sbjct: 583 ENYAGKWPFWLSPRQVMVVPVGPAYDEYAQSVREQLHAAGFMSEADCDAGDTMNKKIRNA 642

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            + +   I++ GDKE S  ++ +R   +    +VS+ + I  L K
Sbjct: 643 QLAQFNFILVVGDKERSSNTVNVRTRDNKVHGEVSVAELISKLQK 687


>gi|284991611|ref|YP_003410165.1| threonyl-tRNA synthetase [Geodermatophilus obscurus DSM 43160]
 gi|284064856|gb|ADB75794.1| threonyl-tRNA synthetase [Geodermatophilus obscurus DSM 43160]
          Length = 690

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 240/645 (37%), Positives = 361/645 (55%), Gaps = 45/645 (6%)

Query: 18  PVHATGSDVAESISRSLAKKAVAVAI----NGKVCDLS-DPVREGSIEIITPEDPRSLAV 72
           P   T  D  ++    L     AV +     G + DL+  P  +  +E +    P   AV
Sbjct: 16  PAGTTAQDALKAAGTPLKGPDGAVVVRDLATGDLKDLAWAPEADAEVEPVPAASPEGRAV 75

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIAR 132
           IRHS AH++A+AVQ ++P  ++ IGP +E+GFYYDF  E+PF+ ++L  +EK+MQEI+  
Sbjct: 76  IRHSTAHVLAQAVQDLFPGTRLGIGPPVENGFYYDFAPERPFTPEDLEALEKRMQEIVKA 135

Query: 133 DSPFLKQYLSHEKARELFESKKEAYKVEIL-------------ESIPAKENVTLY----- 174
              F ++ +S   A+   E   E +K+E++             +       +T+Y     
Sbjct: 136 GQYFSRREISDADAQA--ELAHEPFKLELIGLKGGAGEAAEGADVEVGGAQLTMYDNLDP 193

Query: 175 RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELT 232
           R G+  W DLCRGPH+  T  +  F  L + A AYWRG    P L R+YGTAW +++   
Sbjct: 194 RSGDRVWTDLCRGPHLPRTSNIPAF-SLTRSAAAYWRGSEKNPQLQRVYGTAWESREAHK 252

Query: 233 QYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD-D 290
            +L  + E+E+RDHR+L  E+DLF   ++ GSG+  +H KG  + + +  Y RR+ ++  
Sbjct: 253 AHLEQVAEAERRDHRRLGAELDLFSFPDEIGSGLAVFHPKGGVVRREMEDYSRRRHEEAG 312

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADD-------TIKDLRTFALKPMNCPG 343
           Y  +NTP +    L+Q SGH + Y   M+     D+         +  + + LKPMNCP 
Sbjct: 313 YSFVNTPHITKGQLFQTSGHLEWYAEGMYPAMHLDEERDAEGKVRRQGQDYYLKPMNCPV 372

Query: 344 HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE 403
           H  VF    +SY+ELP+RL EFG+VYR E SG +HGL R RGFTQDDAH++CT EQM  E
Sbjct: 373 HNLVFRSRGRSYKELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYCTPEQMQGE 432

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTR-PEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
              +   ++ +  D+G E   ++LSTR PEK +GSD  W+ A + ++   +  + S  D 
Sbjct: 433 IRSLLQFVLDLLADYGLEDFYLELSTRNPEKSIGSDEDWERATDALR---EAAEASGLDL 489

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
           +   +  G  AFY PK     +DAIGR WQ  TIQVD  LP RF   Y  +   +  PVM
Sbjct: 490 V---LDPGGAAFYAPKISVQARDAIGRTWQMSTIQVDLMLPERFGLEYTAADGTRQRPVM 546

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSI 582
           IHRA+FGS+ERF G++ E++ G  P WL+P+Q +   +T   V Y +++A  L++  + +
Sbjct: 547 IHRALFGSMERFFGVLTEHYAGAFPAWLAPVQVVGIPVTDEQVGYLRDVALQLRARGIRV 606

Query: 583 ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR-RFGS 626
           E D  ++ +  KIR  S ++IP ++I G  +A   ++  R R GS
Sbjct: 607 EVDDSDDRMQKKIRTASKQRIPFVLIAGATDAEAGAVSFRFRDGS 651


>gi|90961470|ref|YP_535386.1| threonyl-tRNA synthetase [Lactobacillus salivarius UCC118]
 gi|122993083|sp|Q1WUN2|SYT_LACS1 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|90820664|gb|ABD99303.1| Threonyl-tRNA synthetase [Lactobacillus salivarius UCC118]
          Length = 649

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 234/642 (36%), Positives = 375/642 (58%), Gaps = 24/642 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEI 61
           S IK+TFPD S+K F    T +++A+SIS SLAKKAVA  ++G   DL+ P++E GSIEI
Sbjct: 2   SSIKITFPDNSVKEFDAGVTTAEIAKSISISLAKKAVAGKVDGNFVDLNQPLKEDGSIEI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELA 120
           IT +    L V+  + A ++A A+  ++P ++  +G + E GFY+D D  E   +  +  
Sbjct: 62  ITKDSNDGLVVLWRTAAQVLANALHELYPNMKFGMGDVTEHGFYFDTDNSESQVAETDFE 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN--VTLYRQGE 178
           +I +KM EII  + P  +   S E+A  L     + Y+ E++  +  K N  V  Y+QG+
Sbjct: 122 KISQKMSEIIKANLPIERVEFSEEEALNLVSG--DEYQEELVRDVANKNNGRVVAYKQGD 179

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+  G  + STG+VK  FKL+ VAGAYW+G S+ PML RIYGTA+  Q++L   L   
Sbjct: 180 FIDITDGVVLSSTGEVK-IFKLLSVAGAYWKGASSNPMLQRIYGTAFYKQKDLDAELQRQ 238

Query: 239 EESEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINT 296
           +E+ +RDHR +  E+DLF +  + G+G+ +W   G  I + +  Y+  +++   ++ + T
Sbjct: 239 KEARERDHRVIGNELDLFFVDPKVGAGLPYWMPNGATIRRVIERYIIDKEVAWGFQHVYT 298

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P + + +L++QSGHWD YR +MF        + D     L+PMNCP H+ V+NH  +SYR
Sbjct: 299 PVLANLNLYKQSGHWDHYREDMFPPM----DMGDGEMLELRPMNCPSHIQVYNHHKRSYR 354

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ELP+R+AE G ++R E SG+L GL RVR  T +D H F   + + +E   +  L+  +Y 
Sbjct: 355 ELPLRIAELGMMHRYEKSGALTGLSRVREMTLNDGHDFIEPDHIEDEIKTLIKLMTEVYN 414

Query: 417 DFGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
           DF       +LS R     EK    D +W+ +++ +K  +D +       +      GE 
Sbjct: 415 DFDITDYRFRLSYRDPKNTEKYFDDDEMWEKSQSKLKAAMDDMG------LEYFEAEGEA 468

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           AFYGPK +   K A+G +    TIQ+DF LP RF+  Y+ +  E+  PVM+HR +  ++E
Sbjct: 469 AFYGPKIDVQTKTALGGEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMVHRGIVSTME 528

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETI 591
           RF   + E +KG  P WL+P Q  +  + +   ++Y  ++++ L++H + +  D RNE +
Sbjct: 529 RFTAYLTEMYKGAFPTWLAPHQVDIIPVKNDLHMDYVNDLSSKLRAHGIRVTVDDRNEKM 588

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            YKIR+  + KIP  ++ GD+E S  ++ +R++G   T  ++
Sbjct: 589 GYKIRQAQVNKIPYTLVIGDEEVSNGTVTVRKYGEEKTNTMT 630


>gi|257387444|ref|YP_003177217.1| threonyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286]
 gi|257169751|gb|ACV47510.1| threonyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286]
          Length = 640

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 243/638 (38%), Positives = 372/638 (58%), Gaps = 23/638 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
           S + +T PDGS     V AT  D A  I   L    VA  ++G++ D   P+  +  +EI
Sbjct: 2   STVTVTLPDGSPLELEVGATVEDAAYEIGPGLGSDTVAGVVDGELVDKHTPLPDDADLEI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +T      + V+RHS AH+ A+A+Q ++PE ++ +GP  +DGFYYD          +L  
Sbjct: 62  VTDGADEYVDVLRHSAAHVFAQALQRLYPEAELTLGPWTDDGFYYDVTGVDLDED-DLED 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWF 180
           IE++  EIIA D    +  L  E A + +E  +  YK EIL +  A E+ V+ Y QGE++
Sbjct: 121 IEEEAHEIIAEDLDIERVMLDREAALDRYEDNE--YKQEILATEAAGEDPVSFYEQGEFY 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLC+GPHV STG++  F  L++++ +YWRG+ +   L+R+YGTA+ T++EL +YL   ++
Sbjct: 179 DLCQGPHVESTGEIGGF-ALLEMSASYWRGEEDNDTLTRVYGTAFPTEEELDEYLERRQK 237

Query: 241 SEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           +++RDHRK+ +EMDLF I E  G G+  +   G  +   L  Y+    ++  Y+E+ TP 
Sbjct: 238 AKERDHRKIGQEMDLFSIDETTGPGLPLYEPNGKTVLNELSEYVADLNREAGYDEVETPH 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    LW++SGH+D+Y  +MF +   D+       + LKPMNCPGH  +F+    SYR+L
Sbjct: 298 VFRTELWKKSGHYDNYVDDMFLLDVNDEE------YGLKPMNCPGHATIFDQKSWSYRDL 351

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R  E G VYR E  G L GL R   FT DD H+F   +Q+  E L I ++I+ I   F
Sbjct: 352 PIRYFEDGKVYRKEQRGELSGLSRTWSFTIDDGHLFVRPDQIEAEVLSIMDIILDILDTF 411

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
             +   V+ +TRPEK  GSD +W+ AE+ ++ VL+      Q+ I+  V  G+GAFYGPK
Sbjct: 412 SLD-YTVQFATRPEKSTGSDEIWEKAESQLEAVLE------QEGIDYVVEEGDGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++  +DA+GR W   T+Q+DFN+P RF+  Y    +E   PVMIHRA++GS ERF  ++
Sbjct: 465 IDFAFEDALGRHWDGPTVQLDFNMPDRFDLTYTGEDNEDHRPVMIHRALYGSYERFFMVL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE++ G  P WL+P Q  +  ++   ++Y +EIA  L    + IE   R+ T+  KI+  
Sbjct: 525 IEHYNGKFPPWLAPEQVRILPVSDDNIDYCEEIAAELDDFRVEIED--RSWTVGKKIQVA 582

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
              K+P +++ GD E +  +I +R       + + L D
Sbjct: 583 HDDKVPYMMVIGDDEEAAGTISVRDRKEREEKDLELAD 620


>gi|194861340|ref|XP_001969762.1| GG23767 [Drosophila erecta]
 gi|190661629|gb|EDV58821.1| GG23767 [Drosophila erecta]
          Length = 746

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 247/645 (38%), Positives = 366/645 (56%), Gaps = 24/645 (3%)

Query: 5   IKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG--SIEI 61
           IK+T PDG  +       T  +VA  IS+ LA   V   +NG+V DL D V EG  ++++
Sbjct: 108 IKVTLPDGKQVDATSWETTPYEVARGISQGLADNTVISKVNGEVWDL-DRVLEGNCTLQL 166

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELA 120
           +  +DP + AV  HS AHIM EA++ I+    +  GP IE+GFYYD   E +  S+++  
Sbjct: 167 LKFDDPEAQAVFWHSSAHIMGEAMERIYGG-HLCYGPPIENGFYYDMHLEGEGISTNDYG 225

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            +E  +++I+     F +  +      E+F  K   +KV IL      +  T+Y+ G   
Sbjct: 226 AMEGLVKQIVKEKQNFERLEMKKSDLLEMF--KYNEFKVRILNEKVTTDRTTVYKCGSLI 283

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHVR TG+VK   K+ K +  YW G ++   L R+YG ++   ++L ++    EE
Sbjct: 284 DLCRGPHVRHTGKVKAL-KITKNSSTYWEGKADAETLQRVYGISFPDPKQLKEWEKLQEE 342

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQV 299
           + KRDHRK+ RE +LF   E   G  F+  +G  I+ TL+ +++ +  K  ++E+ +P +
Sbjct: 343 AAKRDHRKIGREQELFFFHELSPGSCFFQPRGAHIYNTLMGFIKSEYRKRGFQEVISPNI 402

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +  LW  SGHW  Y  NMF+ +   +T      FALKPMNCPGH  +F++  +S+RELP
Sbjct: 403 YNAKLWMTSGHWQHYAENMFSFEAEKET------FALKPMNCPGHCLIFDNRNRSWRELP 456

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+A+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E       +  +Y  FG
Sbjct: 457 LRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAPEQIKSEMKGCLEFLKYVYTIFG 516

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F   +V LSTRP+  +G    W+DAE  +   L+      ++        G+GAFYGPK 
Sbjct: 517 FSFQLV-LSTRPDNYLGELEQWNDAEKALAESLNEFGMPWKENP------GDGAFYGPKI 569

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +  + DA+ R  QC TIQ+DF LP RFN  Y+    EK  PV+IHRA+ GS+ER I I+ 
Sbjct: 570 DITIMDALKRAHQCATIQLDFQLPIRFNLSYIADDGEKKRPVIIHRAILGSVERMIAILT 629

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF-RNETINYKIREH 598
           ENF G  P WLSP Q +V  +  +  +YAQ + + L       E D    +T+N KIR  
Sbjct: 630 ENFAGKWPFWLSPRQVMVVPVGPAYDQYAQSVRDQLHDAGFMSEADCDAGDTMNKKIRNA 689

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            + +   I++ GDKE S  ++ +R   +    +VS+ + I  L K
Sbjct: 690 QLAQFNFILVVGDKERSSNTVNVRTRDNKVHGEVSVAELITKLQK 734


>gi|195147146|ref|XP_002014541.1| GL19239 [Drosophila persimilis]
 gi|198473694|ref|XP_001356405.2| GA18821 [Drosophila pseudoobscura pseudoobscura]
 gi|194106494|gb|EDW28537.1| GL19239 [Drosophila persimilis]
 gi|198138068|gb|EAL33469.2| GA18821 [Drosophila pseudoobscura pseudoobscura]
          Length = 754

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 244/644 (37%), Positives = 364/644 (56%), Gaps = 22/644 (3%)

Query: 5   IKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEII 62
           IK+T PDG  +       T  DVA  IS+ LA   +   +NG+V DL   + E  S++++
Sbjct: 116 IKVTLPDGKQVDAISWETTPYDVARGISQGLADNTIISKVNGQVWDLDRVLEENCSLQLL 175

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQ 121
             +DP + AV  HS AHIM EA++ I+    +  GP IE GFYYD   E +  S+++   
Sbjct: 176 KFDDPEAQAVFWHSSAHIMGEAMERIYGG-HLCYGPPIESGFYYDMHLEGEGISTNDYGT 234

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +E  +++I+     F +  +      E+F  K   +K+ IL      +  T+Y+ G   D
Sbjct: 235 MESLVKQIVKEKQNFERLEMKKADLLEMF--KYNEFKLRILNEKVTTDRTTVYKCGSLID 292

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHVR TG+VK   K+ K +  YW G ++   L R+YG ++   ++L ++    EE+
Sbjct: 293 LCRGPHVRHTGKVKAL-KITKNSSTYWEGKADAETLQRVYGISFPDPKQLKEWEKLQEEA 351

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVL 300
            KRDHRK+ RE +LF   E   G  F+  +G  I+ TL+ +++ +  K  ++E+ +P + 
Sbjct: 352 AKRDHRKIGREQELFFFHELSPGSCFFQPRGAHIYNTLMGFIKSEYRKRGFQEVISPNIY 411

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  LW  SGHW  Y  NMF+ +   +       FALKPMNCPGH  +F+   +S+RELP+
Sbjct: 412 NAKLWMTSGHWQHYAENMFSFEAEKEK------FALKPMNCPGHCLIFDTRNRSWRELPL 465

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+A+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E       +  +Y  FGF
Sbjct: 466 RMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAPEQIKSEMKGCLEFLKHVYTIFGF 525

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
              +V LSTRPEK +G    W+DAE  ++  L+      ++        G+GAFYGPK +
Sbjct: 526 TFQLV-LSTRPEKYLGELEQWNDAEKALEESLNEFGMPWKENP------GDGAFYGPKID 578

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
             + DA+ R  QC TIQ+DF LP RFN  Y+    EK  PV+IHRA+ GS+ER I I+ E
Sbjct: 579 ITIMDALKRAHQCATIQLDFQLPIRFNLNYIADDGEKKRPVIIHRAILGSVERMIAILTE 638

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF-RNETINYKIREHS 599
           N+ G  P WLSP Q +V  +  +  +YAQ + + L +     E D    +T+N KIR   
Sbjct: 639 NYAGKWPFWLSPRQVMVVPVGPAYDQYAQTVKDQLHAAGFMSEADCDAGDTMNKKIRNAQ 698

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           + +   I++ GDKE S  ++ +R   +    +VS+ + I  L K
Sbjct: 699 LAQFNFILVVGDKERSSNTVNVRTRDNKVHGEVSVSELITKLQK 742


>gi|300214322|gb|ADJ78738.1| Threonyl-tRNA synthetase (Threonine--tRNA ligase) (ThrRS)
           [Lactobacillus salivarius CECT 5713]
          Length = 649

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 234/642 (36%), Positives = 375/642 (58%), Gaps = 24/642 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEI 61
           S IK+TFPD S+K F    T +++A+SIS SLAKKAVA  ++G   DL+ P++E GSIEI
Sbjct: 2   SSIKITFPDNSVKEFDASVTTAEIAKSISISLAKKAVAGKVDGNFVDLNQPLKEDGSIEI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELA 120
           IT +    L V+  + A ++A A+  ++P ++  +G + E GFY+D D  E   +  +  
Sbjct: 62  ITKDSNDGLVVLWRTAAQVLANALHELYPNMKFGLGDVTEHGFYFDTDNSEGQVAETDFE 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN--VTLYRQGE 178
           +I +KM EII  + P  +   S E+A  L     + Y+ E++  +  K N  V  Y+QG+
Sbjct: 122 KISQKMSEIIKANLPIERVEFSEEEALNLVSG--DEYQEELVRDVANKNNGRVVAYKQGD 179

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+  G  + STG+VK  FKL+ VAGAYW+G S+ PML RIYGTA+  Q++L   L   
Sbjct: 180 FIDITDGVVLSSTGEVK-IFKLLSVAGAYWKGASSNPMLQRIYGTAFYKQKDLDAELQRQ 238

Query: 239 EESEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINT 296
           +E+ +RDHR +  E+DLF +  + G+G+ +W   G  I + +  Y+  +++   ++ + T
Sbjct: 239 KEARERDHRVIGNELDLFFVDPKVGAGLPYWMPNGATIRRVIERYIIDKEVAWGFQHVYT 298

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P + + +L++QSGHWD YR +MF        + D     L+PMNCP H+ V+NH  +SYR
Sbjct: 299 PVLANLNLYKQSGHWDHYREDMFPPM----DMGDGEMLELRPMNCPSHIQVYNHHKRSYR 354

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ELP+R+AE G ++R E SG+L GL RVR  T +D H F   + + +E   +  L+  +Y 
Sbjct: 355 ELPLRIAELGMMHRYEKSGALTGLSRVREMTLNDGHDFIEPDHIEDEIKTLIKLMTEVYN 414

Query: 417 DFGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
           DF       +LS R     EK    D +W+ +++ +K  +D +       +      GE 
Sbjct: 415 DFDITDYRFRLSYRDPKNTEKYFDDDEMWEKSQSKLKAAMDDMG------LEYFEAEGEA 468

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           AFYGPK +   K A+G +    TIQ+DF LP RF+  Y+ +  E+  PVM+HR +  ++E
Sbjct: 469 AFYGPKIDVQTKTALGGEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMVHRGIVSTME 528

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETI 591
           RF   + E +KG  P WL+P Q  +  + +   ++Y  ++++ L++H + +  D RNE +
Sbjct: 529 RFTAYLTEMYKGAFPTWLAPHQVDIIPVKNDLHMDYVNDLSSKLRAHGIRVTVDDRNEKM 588

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            YKIR+  + KIP  ++ GD+E S  ++ +R++G   T  ++
Sbjct: 589 GYKIRQAQVNKIPYTLVIGDEEVSNGTVTVRKYGEEKTNTMT 630


>gi|305681479|ref|ZP_07404286.1| threonine--tRNA ligase [Corynebacterium matruchotii ATCC 14266]
 gi|305659684|gb|EFM49184.1| threonine--tRNA ligase [Corynebacterium matruchotii ATCC 14266]
          Length = 687

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 235/628 (37%), Positives = 354/628 (56%), Gaps = 40/628 (6%)

Query: 45  GKVCDLSD-PVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG 103
           G + DLS  P  +     I        AVIRHSC H++A+AVQ  +P  ++ IGP I++G
Sbjct: 48  GHLKDLSHVPETDAEFLPIPANTAEGRAVIRHSCTHVLAQAVQQEFPGTKLGIGPAIDNG 107

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQ-YLSHEKARELFESKKEAYKVEIL 162
           FYYDFD  +PF+ ++L +IEK+M++II +   F ++ Y    +A E    K E YK+E++
Sbjct: 108 FYYDFDVAEPFTPEDLQRIEKRMKKIIKQGQKFERRVYADQAEAAEAL--KNEPYKLELI 165

Query: 163 ESI----PAKENVTLYRQGE---------------WFDLCRGPHVRSTGQVKKFFKLMKV 203
                  P  +  T    GE               W+DLCRGPHV +T  +  F  L + 
Sbjct: 166 ADKGSVDPQSDEATEVGAGELTGYYNLNPRTKAVEWYDLCRGPHVPTTKYIPAF-ALTRS 224

Query: 204 AGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-G 262
           + AYWRGD     L RIYGTAW +   L +Y + + E+EKRDHR+L +E+DLF   ++ G
Sbjct: 225 SAAYWRGDQANAGLQRIYGTAWESPDALAEYQHKMAEAEKRDHRRLGQELDLFSFPDEIG 284

Query: 263 SGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA- 320
           SG   +H  G  +   +  + RR+ I   Y  +NTP +    L+++SGH D Y   MF  
Sbjct: 285 SGFPVFHPNGGIVRLEMEEHSRRRHIAAGYSFVNTPHLTKGELFEKSGHLDFYADGMFPP 344

Query: 321 ------VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
                 V    +  K    +  KPMNCP H  +F    +SYRELP+RL EFG+VYR E S
Sbjct: 345 MKLDGEVDADGNVTKPAVDYYTKPMNCPMHNLIFASRGRSYRELPLRLFEFGTVYRYEKS 404

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR-PEK 433
           G +HGL R RGFTQDDAH++CT++Q+  E   + + +IS+ +D+G +   ++LST+ PEK
Sbjct: 405 GVIHGLTRARGFTQDDAHIYCTEDQLEAELTSVLDFVISLLRDYGLDDFYLELSTKDPEK 464

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
            VGSD +W+ +  I++ V D    S  D +      G  AFYGPK     +DAIGR WQ 
Sbjct: 465 FVGSDEIWEKSTAILQRVAD---KSGLDLVPDP---GGAAFYGPKISVQARDAIGRTWQM 518

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI 553
            T+Q+DFNLP RF+  Y      K  P+MIHRA+FGSIERF G+++E++ G  P WL+P 
Sbjct: 519 STVQLDFNLPDRFHLEYTAPDGTKKQPIMIHRALFGSIERFFGVLLEHYAGAFPAWLAPQ 578

Query: 554 QAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
           Q +   +  + + + + + N L++  +    D  ++ +  KIR ++  K+P +++ G ++
Sbjct: 579 QVMGIPVADTFIPHLESVINELQARGVRASVDTSDDRMQKKIRTYTQAKVPFMLLAGARD 638

Query: 614 ASERSIGIRRFGSTTTQKVSLLDAIPIL 641
              +++  R    +    V +  AI ++
Sbjct: 639 VEAQAVSFRFLDGSQLNGVPVAQAISLI 666


>gi|258653602|ref|YP_003202758.1| threonyl-tRNA synthetase [Nakamurella multipartita DSM 44233]
 gi|258556827|gb|ACV79769.1| threonyl-tRNA synthetase [Nakamurella multipartita DSM 44233]
          Length = 699

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 254/667 (38%), Positives = 369/667 (55%), Gaps = 45/667 (6%)

Query: 8   TFPDGSIKNFPVHAT-GSDVAESISRSLAKKAVAVA--INGKVCDLS-DPVREGSIEIIT 63
           T P       P   T GS V  +   S   +AV V    +G++ DLS  P  +  +E + 
Sbjct: 6   TAPPAPSVRVPAGTTAGSAVRAAGLPSSGPQAVVVVRDADGRLRDLSWSPDGDVDVEPVG 65

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +     +VIRHS AH++A+AVQ  +P+ ++ IGP I+DGFYYDFD ++PF+ D+LA +E
Sbjct: 66  ADTEDGRSVIRHSAAHVLAQAVQDKFPDAKLGIGPPIKDGFYYDFDVDRPFTPDDLADLE 125

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE---------------SIPAK 168
           K+M++II     F ++ +    A    E   E YK+E+++                + A 
Sbjct: 126 KRMRKIIKSGQRFARRVVD-SPAAARAELAAEPYKLELIDLKSDAAVDGSADEAVEVGAG 184

Query: 169 ENVTLY-----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIY 221
           E +T+Y       G+  W DLCRGPHV +T  +  F +L++ A AYWRG    P L RIY
Sbjct: 185 E-LTIYDNLHAHTGDRVWGDLCRGPHVPTTRAIPAF-QLLRSAAAYWRGSEKNPQLQRIY 242

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLI 280
           GTAW + + L  Y  +  E+E+RDHRKL  E+DLF   ++ GSG+  +H KG  I + L 
Sbjct: 243 GTAWESAEALEAYQQWHAEAERRDHRKLGVELDLFSFPDELGSGLPVFHPKGGIIRKELE 302

Query: 281 SYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTI-------KDLR 332
            Y R K I   Y  + TP +    L++ SGH D Y   MF     D  +       K  +
Sbjct: 303 DYSRAKHIAAGYSFVYTPHITKAKLYEISGHLDWYADGMFPAMHLDAELGPDGEVRKPGQ 362

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
            + LKPMNCP H  +F    +SYRELP+R+ EFG+VYR E SG +HGL RVRG TQDDAH
Sbjct: 363 DYYLKPMNCPMHDLIFRSRGRSYRELPLRMFEFGAVYRYEKSGVIHGLTRVRGMTQDDAH 422

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE-KRVGSDALWDDAENIMKGV 451
           +FCT+EQM +E   +   ++ +  D+G +   ++LSTR E K VG+D  W  A   +  V
Sbjct: 423 IFCTREQMRDELTSLLRFVLELLADYGLDDYYLELSTRNEDKYVGTDENWAVATETLAEV 482

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
               + S  D ++     G  AFYGPK     +DA+GR WQ  TIQ+DFNLP RF   Y 
Sbjct: 483 ---ARESGLDLVDD---PGGAAFYGPKISVQARDALGRTWQMSTIQLDFNLPERFELEYT 536

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
                K  PVMIHRA+FGS+ERF G++ E++ G  P WLSP+Q +   +  +  +Y Q++
Sbjct: 537 GPDGSKQRPVMIHRALFGSVERFFGVLTEHYAGAFPAWLSPVQVVGIPVADAFGDYLQDV 596

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
            + L +  +  E D  ++ +  KIR H+  K+P +++ G+K+ +  ++  R    T    
Sbjct: 597 VDQLVARGIRAEADHSDDRMQKKIRTHTTAKVPFLLLAGEKDVAAGAVSFRFRDGTQING 656

Query: 632 VSLLDAI 638
           V    A+
Sbjct: 657 VPAAAAV 663


>gi|227890560|ref|ZP_04008365.1| threonyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
 gi|227867498|gb|EEJ74919.1| threonyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
          Length = 649

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 234/642 (36%), Positives = 375/642 (58%), Gaps = 24/642 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEI 61
           S IK+TFPD S+K F    T +++A+SIS SLAKKAVA  ++G   DL+ P++E GSIEI
Sbjct: 2   SSIKITFPDNSVKEFDAGVTTAEIAKSISISLAKKAVAGKVDGNFVDLNQPLKEDGSIEI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELA 120
           IT +    L V+  + A ++A A+  ++P ++  +G + E GFY+D D  E   +  +  
Sbjct: 62  ITKDSNDGLVVLWRTAAQVLANALHELYPNMKFGLGDVTEHGFYFDTDNSEGQVAETDFE 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN--VTLYRQGE 178
           +I +KM EII  + P  +   S E+A  L     + Y+ E++  +  K N  V  Y+QG+
Sbjct: 122 KISQKMSEIIKANLPIERVEFSEEEALNLVSG--DEYQEELVRDVANKNNGRVVAYKQGD 179

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+  G  + STG+VK  FKL+ VAGAYW+G S+ PML RIYGTA+  Q++L   L   
Sbjct: 180 FIDITDGVVLSSTGEVK-IFKLLSVAGAYWKGASSNPMLQRIYGTAFYKQKDLDAELQRQ 238

Query: 239 EESEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINT 296
           +E+ +RDHR +  E+DLF +  + G+G+ +W   G  I + +  Y+  +++   ++ + T
Sbjct: 239 KEARERDHRVIGNELDLFFVDPKVGAGLPYWMPNGATIRRVIERYIIDKEVAWGFQHVYT 298

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P + + +L++QSGHWD YR +MF        + D     L+PMNCP H+ V+NH  +SYR
Sbjct: 299 PVLANLNLYKQSGHWDHYREDMFPPM----DMGDGEMLELRPMNCPSHIQVYNHHKRSYR 354

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ELP+R+AE G ++R E SG+L GL RVR  T +D H F   + + +E   +  L+  +Y 
Sbjct: 355 ELPLRIAELGMMHRYEKSGALTGLSRVREMTLNDGHDFIEPDHIEDEIKTLIKLMTEVYN 414

Query: 417 DFGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
           DF       +LS R     EK    D +W+ +++ +K  +D +       +      GE 
Sbjct: 415 DFDITDYRFRLSYRDPKNTEKYFDDDEMWEKSQSKLKAAMDDMG------LEYFEAEGEA 468

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           AFYGPK +   K A+G +    TIQ+DF LP RF+  Y+ +  E+  PVM+HR +  ++E
Sbjct: 469 AFYGPKIDVQTKTALGGEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMVHRGIVSTME 528

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETI 591
           RF   + E +KG  P WL+P Q  +  + +   ++Y  ++++ L++H + +  D RNE +
Sbjct: 529 RFTAYLTEMYKGAFPTWLAPHQVDIIPVKNDLHMDYVNDLSSKLRAHGIRVTVDDRNEKM 588

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            YKIR+  + KIP  ++ GD+E S  ++ +R++G   T  ++
Sbjct: 589 GYKIRQAQVNKIPYTLVIGDEEVSNGTVTVRKYGEEKTNTMT 630


>gi|227432351|ref|ZP_03914343.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Leuconostoc
           mesenteroides subsp. cremoris ATCC 19254]
 gi|227351872|gb|EEJ42106.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Leuconostoc
           mesenteroides subsp. cremoris ATCC 19254]
          Length = 652

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 240/644 (37%), Positives = 371/644 (57%), Gaps = 26/644 (4%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEI 61
           ++I LTFPDG+IK F        VAESIS+SLAKK+V+  ING    ++D + E G  ++
Sbjct: 2   AEISLTFPDGAIKKFDEGIKPIGVAESISKSLAKKSVSGKINGSYIGMNDVITESGDFQL 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSI--WPEVQVAIGPIIEDGFYYDFDKE--QPFSSD 117
           IT  D  +L ++RHS +H++A+A++ I  +  +   +GP IE+GFYYD D       S +
Sbjct: 62  ITTSDSEALDLLRHSASHLLAQALKRIPKFANIHFGVGPFIENGFYYDTDNGAGNQVSIE 121

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +  +IE  M +I+  D P L + ++ ++A ELF    + YKVE++  +P  E +T+  QG
Sbjct: 122 DFPEIEAIMHKIVKEDLPILSREITRDEALELFAD--DPYKVELVNDLPVDEKITIAVQG 179

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           +  +L +G  V STG +K F KL  VAGAYWRGDS+ PM+ R+YGTA+    ++   +  
Sbjct: 180 DHIELDKGGLVPSTGWIKHF-KLTSVAGAYWRGDSSNPMMQRVYGTAFWKAADVEAEIAR 238

Query: 238 LEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEIN 295
            EE+++RDHR + R++DLF  +++ GSG+  W   G  I + +  Y+  K + + Y+ + 
Sbjct: 239 REEAKERDHRVIGRDLDLFFTSQEVGSGLPVWLPNGATIRRQVERYITDKELSNGYQHVY 298

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP + + +L++ SGHWD YR +MF        + D     L+PMNCP H+ VFNH  +SY
Sbjct: 299 TPVLSNLNLYKTSGHWDHYREDMFPPM----DMGDGEFLELRPMNCPSHIMVFNHKPRSY 354

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP+R+AE G ++R E SG+L GL RVR  T +D H F   E++  E   I  +++ +Y
Sbjct: 355 RELPMRIAELGMMHRYEKSGALTGLSRVREMTLNDGHTFVEPEKLEEEFKSILTMMMGVY 414

Query: 416 KDFGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
           +DF  +    +LS R     EK    D +W+ ++  +K  +D +       ++     GE
Sbjct: 415 RDFNIKNYRFRLSYRDPKNTEKYFDDDEMWEKSQKQLKTAMDDLG------LDYFEAEGE 468

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH-PVMIHRAVFGS 530
            AFYGPK +   K A+G +    TIQ+DF LP RF+  Y+       H PVM+HR + G+
Sbjct: 469 AAFYGPKLDVQTKTALGNEETLSTIQLDFLLPERFDLKYIGRDGLDNHRPVMLHRGIVGT 528

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNE 589
           +ERF   +IE +KG  P WLSP+Q  +  +   A   YA  +   L+   L    + ++ 
Sbjct: 529 MERFTAYLIEMYKGAFPTWLSPLQVQIIPVNLGAHGNYANAVQQKLQDAGLRANVETKDA 588

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            + Y IRE    KIP  ++ GD E    ++ +R++G T T  +S
Sbjct: 589 KMGYLIREAQTNKIPYTLVLGDSEVDSNTVTVRKYGDTKTVTMS 632


>gi|317125011|ref|YP_004099123.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Intrasporangium
           calvum DSM 43043]
 gi|315589099|gb|ADU48396.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Intrasporangium
           calvum DSM 43043]
          Length = 664

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 250/667 (37%), Positives = 364/667 (54%), Gaps = 45/667 (6%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI- 59
           M + I +T   GS ++     T  ++ +       +  V   +NG++ DL   V +G + 
Sbjct: 1   MSAPITVTVA-GSERSVDAQTTAGELLDQAGAG-GRDVVVARVNGELRDLFHLVADGDVV 58

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           E +T +    LAV+RHS AH++A+AVQS+ P  ++ IGP I DGFYYDFD E PF  D+L
Sbjct: 59  EPVTVDSADGLAVLRHSTAHVLAQAVQSLDPTAKLGIGPPIRDGFYYDFDVETPFHPDDL 118

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE--------------SI 165
             +EK MQ+II     F ++ ++   A E  E   E YK E++                +
Sbjct: 119 KALEKAMQKIINEGQTFERRVVTDADALE--ELAHEPYKCELVGLKGGAGDAAEGAGVEV 176

Query: 166 PAKENVTLY----RQG--EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSR 219
            A E +T+Y    R G   W DLCRGPH+ ST  +   FKLM+ A AYWRG    P L R
Sbjct: 177 GAGE-LTIYDNVRRDGTRAWGDLCRGPHIPSTKLIGNAFKLMRSAAAYWRGSEKNPQLQR 235

Query: 220 IYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQT 278
           IYGTAW T+ EL  YL  L E+E+RDHR+L  E+DLF   ++ GSG+  +H KG  I + 
Sbjct: 236 IYGTAWPTKDELKAYLDRLAEAERRDHRRLGAELDLFSFPDELGSGLPVFHPKGGVIKRE 295

Query: 279 LISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALK 337
           +  Y+RR+ I++ ++ + TP +    L+  SGH   Y   MF     +        + LK
Sbjct: 296 MEDYVRRRHIEEGFDYVGTPHITKDGLFHTSGHLPYYADTMFPPMELEGA-----KYQLK 350

Query: 338 PMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK 397
            MNCP H  ++    +SYRELP+R  EFGSVYR E SG +HGL RVRG TQDD+H + T 
Sbjct: 351 AMNCPMHNLIYQSRGRSYRELPLRFFEFGSVYRYEKSGVVHGLTRVRGMTQDDSHSYVTP 410

Query: 398 EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR------PEKRVGSDALWDDAENIMKGV 451
           EQ   E   + + ++S+ +DFG +   ++LSTR        K +GSD  W+ A  +++ V
Sbjct: 411 EQAPAEIKHLLDFVLSLLRDFGLDDFYLELSTRDTEGEKSAKFIGSDEQWEVATKVLEDV 470

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
                 ++   +      G  AFYGPK     +DAIGR WQ  TIQ DFN P RF   Y 
Sbjct: 471 ------ATASGLELVADPGGAAFYGPKISVQARDAIGRTWQMSTIQYDFNQPERFGLEYQ 524

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
            +   +  PVMIH A FGSIERF+G+++E++ G  P+WLSP+Q +   +     +Y   +
Sbjct: 525 AADGTRQQPVMIHSAKFGSIERFLGVLVEHYAGAFPVWLSPVQVLGVPVADEYADYLGGV 584

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
            + L+   + +E D  ++    KIR  S  K+P ++I G+ + +  ++  R    +    
Sbjct: 585 LDRLRRKGVRVELDASDDRFPKKIRNASKAKVPFVLIAGEDDRAADAVSFRFRDGSQKNG 644

Query: 632 VSLLDAI 638
           V + DAI
Sbjct: 645 VPIDDAI 651


>gi|242024338|ref|XP_002432585.1| Threonyl-tRNA synthetase, cytoplasmic, putative [Pediculus humanus
           corporis]
 gi|212518045|gb|EEB19847.1| Threonyl-tRNA synthetase, cytoplasmic, putative [Pediculus humanus
           corporis]
          Length = 717

 Score =  441 bits (1133), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 244/639 (38%), Positives = 369/639 (57%), Gaps = 22/639 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGS-DVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           IK+T PDG I       T   D+A+ IS+ LA   V   +NG + DL  P+  +  ++++
Sbjct: 78  IKITLPDGKIVEGESWKTSPYDIAKGISQGLADNTVIAKVNGVLWDLERPLESDCKLQLL 137

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQ 121
             +D  +  V  HS AHI+ EA++ ++    +  GP IE+GFYYD F  +   S+ +   
Sbjct: 138 KFDDEEAQQVFWHSTAHILGEALERLYGG-HLCYGPPIENGFYYDMFTPDSQVSNTDFPS 196

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE  M++I+    PF +  +  E   E+F  K   +KV IL         T+Y+ G   D
Sbjct: 197 IESLMKKIVKEKQPFERLEMKKEDLLEMF--KYNHFKVRILNEKINTPTTTVYKCGSLID 254

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHVR+TG++K F K+ K + AYW G+S    L R+YG ++   ++L ++    EE+
Sbjct: 255 LCRGPHVRNTGKIKAF-KITKNSSAYWEGNSEAESLQRVYGISFPDPKQLKEWERIQEEA 313

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVL 300
            KRDHRKL RE +L+   E   G  F++ KG  I+ TL+ ++R +  K  ++E+ TP + 
Sbjct: 314 AKRDHRKLGREQELYFFHELSPGSCFFYPKGAFIYNTLVEFIRSEYRKRGFQEVITPNIY 373

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  LW+ SGHW  Y  NMF+ +   +T      +ALKPMNCPGH  +F++  +S+RELP+
Sbjct: 374 NVKLWETSGHWQHYAENMFSFELEKET------YALKPMNCPGHCLIFDNRNRSWRELPL 427

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+A+FG ++RNE SG+L GL RVR F QDDAH+FCT  Q+ +E       + ++Y  FGF
Sbjct: 428 RMADFGVLHRNEFSGALSGLTRVRRFQQDDAHIFCTVNQIKSEISGALEFLKNVYGVFGF 487

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
               ++LSTRPEK +G   +WD AE  +   LD        ++N G    +GAFYGPK +
Sbjct: 488 -TFQLRLSTRPEKYLGEINVWDQAEKQLTESLDEF--GFPWKLNPG----DGAFYGPKID 540

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
             + DA+ R  QC TIQ+DF LP RFN  Y+    +K  PV+IHRA+ GS+ER I I+ E
Sbjct: 541 ITILDALKRAHQCATIQLDFQLPIRFNLNYIGESGDKIRPVIIHRAILGSVERMIAILTE 600

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIE-TDFRNETINYKIREHS 599
           ++ G  P WLSP Q+IV  +     EYA+++ + + +   S +  D   +T+N KIR   
Sbjct: 601 SYGGKWPFWLSPRQSIVIPVGLPFYEYAKKVKDDIFNAGFSCDFDDDEGDTMNKKIRNAQ 660

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           + +   I + G+KE +  ++ +R   +    + S+ D I
Sbjct: 661 LAQYNFIFVVGEKEKNAGTVNVRTRDNIVHGEFSVGDVI 699


>gi|195387892|ref|XP_002052626.1| GJ17652 [Drosophila virilis]
 gi|194149083|gb|EDW64781.1| GJ17652 [Drosophila virilis]
          Length = 745

 Score =  441 bits (1133), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 248/645 (38%), Positives = 367/645 (56%), Gaps = 24/645 (3%)

Query: 5   IKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG--SIEI 61
           IK+T PDG  +       T  DVA  IS+ LA   +   +NG+V DL D V EG  S+++
Sbjct: 107 IKVTLPDGKQVDATSWETTPYDVARGISQGLADNTIISKVNGEVWDL-DRVLEGDCSLQL 165

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELA 120
           +  +DP + AV  HS AHIM EA++ I+    +  GP IE GFYYD   E +  S+++  
Sbjct: 166 LKFDDPDAQAVFWHSSAHIMGEAMERIYGG-HLCYGPPIESGFYYDMHLEGEGISTNDYG 224

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            +E  +++I+     F +  +      E+F  K   +KV IL      +  T+Y+ G   
Sbjct: 225 TMETLVKQIVKEKQNFERLEMKKSDLLEMF--KYNEFKVRILNEKVTTDRTTVYKCGSLI 282

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHVR TG+VK   K+ K +  YW G ++   L R+YG ++   ++L ++    EE
Sbjct: 283 DLCRGPHVRHTGKVKAL-KITKNSSTYWEGKADAETLQRVYGISFPDPKQLKEWEKLQEE 341

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQV 299
           + KRDHRK+ RE +LF   E   G  F+  +G  I+ TL++ +R +  K  ++E+ +P +
Sbjct: 342 AAKRDHRKIGREQELFFFHELSPGSCFFQPRGAHIYNTLMNLIRGEYRKRGFQEVISPNI 401

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +  LW  SGHW  Y  NMF+ +   +       FALKPMNCPGH  +F++  +S+RELP
Sbjct: 402 YNAKLWMTSGHWQHYADNMFSFEAEKEK------FALKPMNCPGHCLIFDNRNRSWRELP 455

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+A+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E     + +  +Y  FG
Sbjct: 456 LRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAPEQIKSEMKGCLDFLRHVYTIFG 515

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F   +V LSTRP+K +G    WD AE  +   L+      ++        G+GAFYGPK 
Sbjct: 516 FSFQLV-LSTRPDKYLGELEQWDAAEKALAESLNEFGMPWKENP------GDGAFYGPKI 568

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +  + DA+ R +QC TIQ+DF LP RFN  Y+    EK  PV+IHRA+ GS+ER I I+ 
Sbjct: 569 DITIMDALKRPFQCATIQLDFQLPIRFNLNYIADDGEKKRPVIIHRAILGSVERMIAILT 628

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF-RNETINYKIREH 598
           EN+ G  P WLSP Q +V  +  +  EYA+ + + L +     E D    +T+N KIR  
Sbjct: 629 ENYAGKWPFWLSPRQVMVVPVGPAYDEYAKSVRDQLYAAGFMSEADCDAGDTMNKKIRNA 688

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            + +   I++ GDKE S  ++ +R   +    +VS+ + I  L K
Sbjct: 689 QLAQFNFILVVGDKERSSNTVNVRTRDNKVHGEVSVAELITKLQK 733


>gi|301300332|ref|ZP_07206537.1| threonine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
 gi|300852068|gb|EFK79747.1| threonine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
          Length = 649

 Score =  441 bits (1133), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 234/642 (36%), Positives = 374/642 (58%), Gaps = 24/642 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEI 61
           S IK+TFPD S+K F    T +++A+SIS SLAKKAVA  ++G   DL+ P++E GSIEI
Sbjct: 2   SSIKITFPDNSVKEFDAGVTTAEIAKSISISLAKKAVAGKVDGNFVDLNQPLKEDGSIEI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELA 120
           IT +    L V+  + A ++A A+  ++P ++  +G + E GFY+D D  E   +  +  
Sbjct: 62  ITKDSNDGLVVLWRTAAQVLANALHELYPNMKFGLGDVTEHGFYFDTDNSEGQVAETDFE 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN--VTLYRQGE 178
           +I +KM EII  + P  +   S E+A  L     + Y+ E++  +  K N  V  Y+QG+
Sbjct: 122 KISQKMSEIIKANLPIERVEFSEEEALNLVSG--DEYQEELVRDVANKNNGRVVAYKQGD 179

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+  G  + STG+VK  FKL+ VAGAYW+G S+ PML RIYGTA+  Q++L   L   
Sbjct: 180 FIDITDGVVLSSTGEVK-IFKLLSVAGAYWKGASSNPMLQRIYGTAFYKQKDLDAELQRQ 238

Query: 239 EESEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINT 296
           +E+ +RDHR +  E+DLF +  + G+G+ +W   G  I + +  Y+  +++   ++ + T
Sbjct: 239 KEARERDHRVIGNELDLFFVDPKVGAGLPYWMPNGATIRRVIERYIIDKEVAWGFQHVYT 298

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P + +  L++QSGHWD YR +MF        + D     L+PMNCP H+ V+NH  +SYR
Sbjct: 299 PVLANLSLYKQSGHWDHYREDMFPPM----DMGDGEMLELRPMNCPSHIQVYNHHKRSYR 354

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ELP+R+AE G ++R E SG+L GL RVR  T +D H F   + + +E   +  L+  +Y 
Sbjct: 355 ELPLRIAELGMMHRYEKSGALTGLSRVREMTLNDGHDFIEPDHIEDEIKTLIKLMTEVYN 414

Query: 417 DFGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
           DF       +LS R     EK    D +W+ +++ +K  +D +       +      GE 
Sbjct: 415 DFDITDYRFRLSYRDPKNTEKYFDDDEMWEKSQSKLKAAMDDMG------LEYFEAEGEA 468

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           AFYGPK +   K A+G +    TIQ+DF LP RF+  Y+ +  E+  PVM+HR +  ++E
Sbjct: 469 AFYGPKIDVQTKTALGGEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMVHRGIVSTME 528

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETI 591
           RF   + E +KG  P WL+P Q  +  + +   ++Y  ++++ L++H + +  D RNE +
Sbjct: 529 RFTAYLTEMYKGAFPTWLAPHQVDIIPVKNDLHMDYVNDLSSKLRAHGIRVTVDDRNEKM 588

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            YKIR+  + KIP  ++ GD+E S  ++ +R++G   T  ++
Sbjct: 589 GYKIRQAQVNKIPYTLVIGDEEVSNGTVTVRKYGEEKTNTMT 630


>gi|330719257|ref|ZP_08313857.1| threonyl-tRNA synthetase [Leuconostoc fallax KCTC 3537]
          Length = 654

 Score =  441 bits (1133), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 234/645 (36%), Positives = 378/645 (58%), Gaps = 26/645 (4%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
           S+++L FPDG+IK F       DVAESIS+SLAKK+V+  +NG    + D +   G  ++
Sbjct: 2   SELELVFPDGAIKTFAAGTKPLDVAESISKSLAKKSVSAKLNGAYVGMHDVIPASGQFQL 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSI--WPEVQVAIGPIIEDGFYYDFDKE--QPFSSD 117
           IT  D  +L ++RHS +H++A+A++ I  +  +   +GP IE+GFYYD D       S +
Sbjct: 62  ITTSDDEALDLLRHSASHLLAQALKRIPKFSNIHFGVGPFIENGFYYDTDNGAGNQVSVE 121

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           + A+IE  M +I+  D P + + ++ E+A  +F  K + YKVE++  +PA+E +T+  QG
Sbjct: 122 DFAEIEAMMHKIVKEDLPIVSREITREEALSMF--KDDPYKVELINDLPAEEKITIAVQG 179

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           +  +L +G  V ST  +K F KL+ VAGAYWRGDS+  M+ RIYGTA+    ++   L  
Sbjct: 180 DHIELDKGGLVPSTSWIKHF-KLVSVAGAYWRGDSSNHMMQRIYGTAFWKAADVEAELQR 238

Query: 238 LEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEIN 295
            +E+++RDHR + R++DLF  +++ GSG+  W   G  I + +  Y+  +++ +DY  + 
Sbjct: 239 RQEAKERDHRNIGRDLDLFFTSQEVGSGLPVWLPNGATIRRQVERYIVDKELSNDYLHVY 298

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP + + +L++ SGHW+ YR +MF        + D     L+PMNCP H+ ++ H  +SY
Sbjct: 299 TPILSNLNLYKTSGHWEHYREDMFPPM----DMGDGEFLELRPMNCPSHIMIYKHKPRSY 354

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP+R+AE G ++R E SG+L GL RVR  T +D H F   E++  E   I  +++ +Y
Sbjct: 355 RELPMRIAELGMMHRYEKSGALTGLSRVREMTLNDGHTFVEPEKLEEEFKSILKMMMEVY 414

Query: 416 KDFGFEKIMVKLSTRPEKRVG----SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
           +DF       +LS R  K        D +W+ ++  +K  +D +       ++     GE
Sbjct: 415 EDFNITDYRFRLSYRDPKNTAKYFDDDEMWEKSQKQLKTAMDDLG------LDYFEAEGE 468

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH-PVMIHRAVFGS 530
            AFYGPK +   K A+G +    TIQ+DF LP RF+  Y+    +  H PVM+HR + G+
Sbjct: 469 AAFYGPKLDVQTKTALGGEETLSTIQLDFLLPERFDLSYIGEDGKDNHRPVMLHRGIVGT 528

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNE 589
           +ERF   +IE +KG  P WLSP+Q  +  +   A  +YA+ I   L+   L    + ++ 
Sbjct: 529 MERFTAYLIEMYKGAFPTWLSPLQVQIIPVNLGAHGDYARRIQQQLQVAGLRANVETKDA 588

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
            + Y IRE   KK+P  ++ GD E ++ ++ +R++GS  T+ +S+
Sbjct: 589 KMGYLIREAQTKKVPYTLVLGDNEVADETVTVRQYGSEKTETISI 633


>gi|116617774|ref|YP_818145.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Leuconostoc
           mesenteroides subsp. mesenteroides ATCC 8293]
 gi|122272025|sp|Q03YF0|SYT_LEUMM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|116096621|gb|ABJ61772.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Leuconostoc
           mesenteroides subsp. mesenteroides ATCC 8293]
          Length = 652

 Score =  440 bits (1132), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 239/644 (37%), Positives = 372/644 (57%), Gaps = 26/644 (4%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEI 61
           ++I LTFPDG+IK F        VAESIS+SLAKK+V+  ING    ++D + E G  ++
Sbjct: 2   AEISLTFPDGAIKKFDEGIKPIGVAESISKSLAKKSVSGKINGSYIGMNDVITESGDFQL 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSI--WPEVQVAIGPIIEDGFYYDFDKE--QPFSSD 117
           IT  D  +L ++RHS +H++A+A++ I  +  +   +GP IE+GFYYD D       S +
Sbjct: 62  ITTSDSEALDLLRHSASHLLAQALKRIPKFANIHFGVGPFIENGFYYDTDNGAGNQVSIE 121

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +  +IE  M +I+  D P L + ++ ++A E+F    + YKVE++  +P  E +T+  QG
Sbjct: 122 DFPEIEAIMHKIVKEDLPILSREITRDEALEIFAD--DPYKVELVNDLPVDEKITIAVQG 179

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           +  +L +G  V STG +K F KL  VAGAYWRGDS+ PM+ R+YGTA+    ++   +  
Sbjct: 180 DHIELDKGGLVPSTGWIKHF-KLTSVAGAYWRGDSSNPMMQRVYGTAFWKAADVEAEIAR 238

Query: 238 LEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEIN 295
            EE+++RDHR + R++DLF  +++ GSG+  W   G  I + +  Y+  K + + Y+ + 
Sbjct: 239 REEAKERDHRVIGRDLDLFFTSQEVGSGLPVWLPNGATIRRQVERYITDKELSNGYQHVY 298

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP + + +L++ SGHWD YR +MF        + D     L+PMNCP H+ VFNH  +SY
Sbjct: 299 TPVLSNLNLYKTSGHWDHYREDMFPPM----DMGDGEFLELRPMNCPSHIMVFNHKPRSY 354

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP+R+AE G ++R E SG+L GL RVR  T +D H F   E++  E   I  +++ +Y
Sbjct: 355 RELPMRIAELGMMHRYEKSGALTGLSRVREMTLNDGHTFVEPEKLEEEFKSILTMMMGVY 414

Query: 416 KDFGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
           +DF  +    +LS R     EK    D +W+ ++  +K  +D +       ++     GE
Sbjct: 415 RDFNIKDYRFRLSYRDPKNTEKYFDDDEMWEKSQKQLKTAMDDLG------LDYFEAEGE 468

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH-PVMIHRAVFGS 530
            AFYGPK +   K A+G +    TIQ+DF LP RF+  Y+       H PVM+HR + G+
Sbjct: 469 AAFYGPKLDVQTKTALGNEETLSTIQLDFLLPERFDLKYIGRDGLDNHRPVMLHRGIVGT 528

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNE 589
           +ERF   +IE +KG  P WLSP+Q  +  +   A   YA  +   L+   L    + ++ 
Sbjct: 529 MERFTAYLIEMYKGAFPTWLSPLQVQIIPVNLGAHGNYANAVQQKLQDAGLRANVETKDA 588

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            + Y IRE    KIP  ++ GD E +  ++ +R++G T T  +S
Sbjct: 589 KMGYLIREAQTNKIPYTLVLGDSEVNSNTVTVRKYGDTKTVTMS 632


>gi|195114918|ref|XP_002002014.1| GI17149 [Drosophila mojavensis]
 gi|193912589|gb|EDW11456.1| GI17149 [Drosophila mojavensis]
          Length = 691

 Score =  440 bits (1132), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 247/645 (38%), Positives = 369/645 (57%), Gaps = 24/645 (3%)

Query: 5   IKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG--SIEI 61
           IK+T PDG  +       T  +VA  IS+ LA   V   +NG+V DL D V EG  ++++
Sbjct: 53  IKVTLPDGKQVDATAWETTPYEVARGISQGLADNTVISKVNGEVWDL-DRVLEGDCTLQL 111

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELA 120
           +  +DP + AV  HS AHIM EA++ I+    +  GP IE+GFYYD   E +  S+++  
Sbjct: 112 LKFDDPEAQAVFWHSSAHIMGEAMERIYGG-HLCYGPPIENGFYYDMHLEGEGISTNDYG 170

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            +E  +++I+     F +  +      E+F  K   +KV IL      +  T+Y+ G   
Sbjct: 171 TMETLIKQIVKEKQNFERLEMKKSDLLEMF--KYNEFKVRILNEKVTSDRTTVYKCGSLI 228

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHVR TG+VK   K+ K +  YW G ++   L R+YG ++   ++L ++    EE
Sbjct: 229 DLCRGPHVRHTGKVKAL-KITKNSSTYWEGKADAETLQRVYGISFPDPKQLKEWEKLQEE 287

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQV 299
           + KRDHRK+ RE +LF   E   G  F+  +G  I+ TL++ +R +  K  ++E+ +P +
Sbjct: 288 AAKRDHRKIGREQELFFFHELSPGSCFFQPRGAHIYNTLMNLIRGEYRKRGFQEVISPNI 347

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +  LW  SGHW  Y  NMF+ +   +       FALKPMNCPGH  +F++  +S+RELP
Sbjct: 348 YNAKLWMTSGHWQHYADNMFSFEAEKEK------FALKPMNCPGHCLIFDNRNRSWRELP 401

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+A+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E     + +  +Y  FG
Sbjct: 402 LRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAPEQIKSEMKGCLDFLRHVYTIFG 461

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F   +V LSTRP+K +G    WD AE  +   L+      ++        G+GAFYGPK 
Sbjct: 462 FSFQLV-LSTRPDKYLGELDQWDAAEKALAESLNEFGMPWKENP------GDGAFYGPKI 514

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +  + DA+ R +QC TIQ+DF LP RFN  Y+    EK  PV+IHRA+ GS+ER I I+ 
Sbjct: 515 DITIMDALKRPFQCATIQLDFQLPIRFNLNYIADDGEKRRPVIIHRAILGSVERMIAILT 574

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF-RNETINYKIREH 598
           EN+ G  P WLSP Q +V  +  +  EYA+ + + L +     E D    +T+N KIR  
Sbjct: 575 ENYAGKWPFWLSPRQVMVVPVGPAYDEYAKTVRDELYAAGFMSEVDCDAGDTMNKKIRNA 634

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            + +   I++ GDKE S +++ +R   +    +VS+ + I  L K
Sbjct: 635 QLAQFNFILVVGDKERSSKTVNVRTRDNKVHGEVSVAELISKLQK 679


>gi|195578689|ref|XP_002079196.1| GD23818 [Drosophila simulans]
 gi|194191205|gb|EDX04781.1| GD23818 [Drosophila simulans]
          Length = 747

 Score =  440 bits (1132), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 246/645 (38%), Positives = 366/645 (56%), Gaps = 24/645 (3%)

Query: 5   IKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG--SIEI 61
           IK+T PDG  +       T  +VA  IS+ LA   V   +NG+V DL D V EG  ++++
Sbjct: 109 IKVTLPDGKQVDATSWETTPYEVARGISQGLADNTVISKVNGEVWDL-DRVLEGNCTLQL 167

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELA 120
           +  +DP + AV  HS AHIM EA++ I+    +  GP IE+GFYYD   E +  S+++  
Sbjct: 168 LKFDDPEAQAVFWHSSAHIMGEAMERIYGG-HLCYGPPIENGFYYDMHLEGEGISTNDYG 226

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            +E  +++I+     F +  +      E+F  K   +KV IL      +  T+Y+ G   
Sbjct: 227 AMEGLVKQIVKEKQNFERLEMKKSDLLEMF--KYNEFKVRILNEKVTTDRTTVYKCGSLI 284

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHVR TG+VK   K+ K +  YW G ++   L R+YG ++   ++L ++    EE
Sbjct: 285 DLCRGPHVRHTGKVKAL-KITKNSSTYWEGKADAETLQRVYGISFPDPKQLKEWEKLQEE 343

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQV 299
           + KRDHRK+ RE +LF   E   G  F+  +G  I+ TL+ +++ +  K  ++E+ +P +
Sbjct: 344 AAKRDHRKIGREQELFFFHELSPGSCFFQPRGAHIYNTLMGFIKAEYRKRGFQEVISPNI 403

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +  LW  SGHW+ Y  NMF+ +   +       FALKPMNCPGH  +F++  +S+RELP
Sbjct: 404 YNAKLWMTSGHWEHYAENMFSFEAEKEK------FALKPMNCPGHCLIFDNRNRSWRELP 457

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+A+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E       +  +Y  FG
Sbjct: 458 LRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAPEQIKSEMKGCLEFLKYVYTIFG 517

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F   +V LSTRP+  +G    W+DAE  +   L+      ++        G+GAFYGPK 
Sbjct: 518 FSFQLV-LSTRPDNYLGELEQWNDAEKALAESLNEFGMPWKENP------GDGAFYGPKI 570

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +  + DA+ R  QC TIQ+DF LP RFN  Y+    EK  PV+IHRA+ GS+ER I I+ 
Sbjct: 571 DITIMDALKRAHQCATIQLDFQLPIRFNLSYIADDGEKKRPVIIHRAILGSVERMIAILT 630

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF-RNETINYKIREH 598
           ENF G  P WLSP Q +V  +  +  +YAQ + + L       E D    +T+N KIR  
Sbjct: 631 ENFAGKWPFWLSPRQVMVVPVGPAYDQYAQAVRDQLHDAGFMSEADCDAGDTMNKKIRNA 690

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            + +   I++ GDKE S  ++ +R   +    +VS+ + I  L K
Sbjct: 691 QLAQFNFILVVGDKERSSNTVNVRTRDNKVHGEVSVAELITKLQK 735


>gi|195351005|ref|XP_002042027.1| GM26732 [Drosophila sechellia]
 gi|194123851|gb|EDW45894.1| GM26732 [Drosophila sechellia]
          Length = 747

 Score =  440 bits (1132), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 246/645 (38%), Positives = 366/645 (56%), Gaps = 24/645 (3%)

Query: 5   IKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG--SIEI 61
           IK+T PDG  +       T  +VA  IS+ LA   V   +NG+V DL D V EG  ++++
Sbjct: 109 IKVTLPDGKQVDATSWETTPYEVARGISQGLADNTVISKVNGEVWDL-DRVLEGNCTLQL 167

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELA 120
           +  +DP + AV  HS AHIM EA++ I+    +  GP IE+GFYYD   E +  S+++  
Sbjct: 168 LKFDDPEAQAVFWHSSAHIMGEAMERIYGG-HLCYGPPIENGFYYDMHLEGEGISTNDYG 226

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            +E  +++I+     F +  +      E+F  K   +KV IL      +  T+Y+ G   
Sbjct: 227 AMEGLVKQIVKEKQNFERLEMKKSDLLEMF--KYNEFKVRILNEKVTTDRTTVYKCGSLI 284

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHVR TG+VK   K+ K +  YW G ++   L R+YG ++   ++L ++    EE
Sbjct: 285 DLCRGPHVRHTGKVKAL-KITKNSSTYWEGKADAETLQRVYGISFPDPKQLKEWEKLQEE 343

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQV 299
           + KRDHRK+ RE +LF   E   G  F+  +G  I+ TL+ +++ +  K  ++E+ +P +
Sbjct: 344 AAKRDHRKIGREQELFFFHELSPGSCFFQPRGAHIYNTLMGFIKAEYRKRGFQEVISPNI 403

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +  LW  SGHW+ Y  NMF+ +   +       FALKPMNCPGH  +F++  +S+RELP
Sbjct: 404 YNAKLWMTSGHWEHYAENMFSFEAEKEK------FALKPMNCPGHCLIFDNRNRSWRELP 457

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+A+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E       +  +Y  FG
Sbjct: 458 LRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAPEQIKSEMKGCLEFLKYVYTIFG 517

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F   +V LSTRP+  +G    W+DAE  +   L+      ++        G+GAFYGPK 
Sbjct: 518 FSFQLV-LSTRPDNYLGELEQWNDAEKALAESLNEFGMPWKENP------GDGAFYGPKI 570

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +  + DA+ R  QC TIQ+DF LP RFN  Y+    EK  PV+IHRA+ GS+ER I I+ 
Sbjct: 571 DITIMDALKRAHQCATIQLDFQLPIRFNLSYIADDGEKKRPVIIHRAILGSVERMIAILT 630

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF-RNETINYKIREH 598
           ENF G  P WLSP Q +V  +  +  +YAQ + + L       E D    +T+N KIR  
Sbjct: 631 ENFAGKWPFWLSPRQVMVVPVGPAYDQYAQAVRDQLHDAGFMSEADCDAGDTMNKKIRNA 690

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            + +   I++ GDKE S  ++ +R   +    +VS+ + I  L K
Sbjct: 691 QLAQFNFILVVGDKERSSNTVNVRTRDNKVHGEVSVAELITKLQK 735


>gi|254556435|ref|YP_003062852.1| threonine-tRNA ligase 1 [Lactobacillus plantarum JDM1]
 gi|308180379|ref|YP_003924507.1| threonine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ST-III]
 gi|254045362|gb|ACT62155.1| threonine-tRNA ligase 1 [Lactobacillus plantarum JDM1]
 gi|308045870|gb|ADN98413.1| threonine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ST-III]
          Length = 654

 Score =  440 bits (1131), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 239/656 (36%), Positives = 377/656 (57%), Gaps = 27/656 (4%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           + I + FPDG+ K F    T   +A+SIS SLAK++VA   N ++ D   P+  +GSIEI
Sbjct: 2   ASINVKFPDGAEKQFDAGVTTEAIAKSISPSLAKRSVAGKFNDQIVDYRQPLTTDGSIEI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE----QPFSSD 117
           I  +    L V+R + A ++A AV+ ++P +    G    +GF++D D      +  S D
Sbjct: 62  IAADSEDGLNVLRQTAAQVLANAVKQLFPNIHFGSGEGNANGFFFDTDNPDEDGKQVSED 121

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN--VTLYR 175
           +L  I  KM  II +D P  ++ LS  KA  L       Y+ +++    A  N  V +Y+
Sbjct: 122 DLEAISDKMAAIIKQDLPIEREVLS--KADALALVGDNPYQQDLVNERAAANNDQVVVYK 179

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
           QG++ DL  G  + STG+VK  FKL+ VAGAYW+G S+ PML RIYGTA+  Q++L   L
Sbjct: 180 QGDFVDLSDGAQLASTGKVK-VFKLLSVAGAYWQGKSSNPMLQRIYGTAFLKQKDLDADL 238

Query: 236 YFLEESEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEE 293
              +E+ +RDHR +  E+DLF +  + G+G+ +W   G  I + +  Y+  +++ + Y+ 
Sbjct: 239 KRRQEARERDHRVIGNELDLFFVDPKVGNGLPYWMPNGATIRRQIERYIIDKEVANGYQH 298

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           + TP + +  +++QSGHWD YR +MF        + D     L+PMNCP H+ ++NH ++
Sbjct: 299 VYTPVLANLDVYKQSGHWDHYREDMFPPM----DMGDGEQLELRPMNCPSHIQIYNHHIR 354

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYRELP+R+AE G ++R E SG+L GL RVR  T +D H F   +Q+  E  KI +L++ 
Sbjct: 355 SYRELPLRIAELGMMHRYEKSGALTGLSRVREMTLNDGHTFVALDQIEEEFKKILSLMVE 414

Query: 414 IYKDFGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL 469
           +Y+DF       +LS R     EK    DA+W+ ++ ++K  +D +       ++     
Sbjct: 415 VYEDFDISDYRFRLSYRDPENKEKYFDDDAMWERSQKMLKSAMDDMG------LDYFEAE 468

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG 529
           GE AFYGPK +   K A+G +    TIQ+DF LP RF+  YV +  E+  PVMIHR +  
Sbjct: 469 GEAAFYGPKLDVQTKTALGGEETLSTIQLDFLLPERFDLKYVGADGEEHRPVMIHRGLVS 528

Query: 530 SIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRN 588
           ++ERF+  + E +KG  P WL+P Q  +  + + A   YA+ +   L +  + +  D RN
Sbjct: 529 TMERFVAYLTEIYKGAFPTWLAPKQVTIIPVNNGAHGAYAETVRRRLAAEGVRVSIDDRN 588

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           E + YKIRE   KK+P +++ GD+E +  S+ +R++G   T+  ++   I  +T+E
Sbjct: 589 EKMGYKIRESQTKKVPYLLVVGDQEVANGSVSVRKYGEERTESEAVDMFIGAITQE 644


>gi|170036087|ref|XP_001845897.1| threonyl-tRNA synthetase [Culex quinquefasciatus]
 gi|167878588|gb|EDS41971.1| threonyl-tRNA synthetase [Culex quinquefasciatus]
          Length = 699

 Score =  440 bits (1131), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 244/647 (37%), Positives = 373/647 (57%), Gaps = 24/647 (3%)

Query: 5   IKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS--IEI 61
           I +T PDG  ++     +T  DVA+ IS+ LA   V   +N ++ DL  P+ EG+  +++
Sbjct: 61  ITVTLPDGKEVQATSWESTPYDVAKGISQGLADNTVIARVNNELWDLDRPL-EGNCKLQL 119

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQP-FSSDELA 120
           +  +DP + AV  HS AHI+ EA++  +    +  GP IE+GFYYD   E    S+ +  
Sbjct: 120 LKFDDPEAQAVFWHSSAHILGEAMEKRYGG-HLCYGPPIENGFYYDMRLEGAGISNSDYG 178

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            +E  +++I+    PF +  +      ++FE  +  +K  IL      E  T+YR G   
Sbjct: 179 ALETDVKKIVKEKQPFERLEMKKSDLLKMFEYNE--FKCRILNEKVTTETTTVYRCGPLI 236

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHVR TG+VK   K++K +  YW G ++   L R+YG ++   ++L ++    EE
Sbjct: 237 DLCRGPHVRHTGKVKAL-KVVKNSSTYWEGKADAETLQRVYGISFPDPKQLKEWEKIQEE 295

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQV 299
           + KRDHRKL +E +LF   E   G  F+  KG  I+ TL++++R +  K  ++E+ +P +
Sbjct: 296 AAKRDHRKLGKEQELFFFHELSPGSCFFQPKGAHIYNTLMNFIRAEYRKRGFQEVISPNI 355

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +  LWQ SGHW  Y  NMF+ +   +T      FALKPMNCPGH  +F+H  +S+RELP
Sbjct: 356 YNAKLWQTSGHWQHYAENMFSFESEKET------FALKPMNCPGHCLIFDHRNRSWRELP 409

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+A+FG ++RNE SG+L GL RVR F QDDAH+FC  +Q+  E     + +  +Y  FG
Sbjct: 410 LRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCMPDQIREEITGCLDFLKHVYGVFG 469

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F   +V LSTRPEK +G   +W+DAE  +   LD      ++        G+GAFYGPK 
Sbjct: 470 FTFNLV-LSTRPEKYLGEIEVWNDAEKALAESLDKFGEPWKENP------GDGAFYGPKI 522

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +  + DA+ R  QC TIQ+DF LP RFN  Y++ + EK  PV++HRA+ GS+ER I I+ 
Sbjct: 523 DITIMDALKRAHQCATIQLDFQLPIRFNLNYIDDNGEKKRPVIVHRAILGSVERMIAILT 582

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF-RNETINYKIREH 598
           EN+ G  P WLSP Q +V  +  +  EYA ++   L       E D    +T+N KIR  
Sbjct: 583 ENYAGKWPFWLSPRQIMVVPVGPAYDEYADKVRLRLHDAGFMAEADLDAGDTMNKKIRNA 642

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
            + +   I++ G+KE S  ++ +R   +    +VS+ + +  L +++
Sbjct: 643 QLAQFNFILVVGEKERSSETVNVRTRDNKVHGEVSVEELLVKLRRQA 689


>gi|302527884|ref|ZP_07280226.1| threonyl-tRNA synthetase [Streptomyces sp. AA4]
 gi|302436779|gb|EFL08595.1| threonyl-tRNA synthetase [Streptomyces sp. AA4]
          Length = 678

 Score =  440 bits (1131), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 235/587 (40%), Positives = 347/587 (59%), Gaps = 49/587 (8%)

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           ED RS  VIRHS AH++A+AVQ  +P+ ++ IGP + DGFYYDF  E+PF+ ++L ++EK
Sbjct: 71  EDGRS--VIRHSAAHVLAQAVQQEFPDAKLGIGPPVRDGFYYDFAVEKPFTPEDLQKLEK 128

Query: 125 KMQEIIARDSPFLKQ-YLSHEKARELFESKKEAYKVEILESIPAKENV------------ 171
           +M++I+     F ++ + S ++A+E  E K E +K+E+++    K+ V            
Sbjct: 129 RMKQIVKGAQQFSRRVFASTDEAKE--ELKDEPFKLELVDLKSEKDTVDTSEIMEVGGGE 186

Query: 172 -TLY-------RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
            T+Y       ++  W DLCRGPHV +T  +  F KL +VA AYWRG+   P L RIYGT
Sbjct: 187 LTIYDNLDPRTKERVWSDLCRGPHVPTTKFIPAF-KLTRVAAAYWRGNEKNPQLQRIYGT 245

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISY 282
           AW + +    +L  L E+E+RDHRKL  E+DLF   E+ GSG+  +H KG  I + L +Y
Sbjct: 246 AWESAEAQDAHLERLAEAERRDHRKLGAELDLFSFPEEIGSGLPVFHPKGGIIRRELENY 305

Query: 283 MRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
            RR+ ++  YE +NTP +    L+  SGH   Y   MF     ++       + LK MNC
Sbjct: 306 SRRRHEEAGYEFVNTPHISKGDLFHTSGHLPYYADTMFPPVQFEE-----EDYYLKAMNC 360

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
           P H  +F    +SYRELP+RL EFG+VYR E SG +HGL RVRG T DD+H++CTKEQM 
Sbjct: 361 PMHNLIFRSRGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRVRGLTMDDSHIYCTKEQMP 420

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTR--PEKRVGSDALWDDAENIMKGVLDTIKNSS 459
           +E   +   ++ +  D+G     ++LSTR   +K +G D  W++A   ++          
Sbjct: 421 SELRSLLKFVLDLLADYGLSDFYLELSTRGDSDKFIGEDWEWEEATETLR---------- 470

Query: 460 QDRINTGVLL----GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS 515
           Q  +++G+ L    G  AFYGPK     KDAIGR WQ  TIQ+DFN   RF   Y     
Sbjct: 471 QAAVDSGLELVPDPGGAAFYGPKISVQAKDAIGRTWQMSTIQLDFNQNKRFGLEYTAPDG 530

Query: 516 EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLL 575
            +  P+MIHRA+FGSIERF G++ E++ G  P WLSP+Q +   IT+  VEY + +   L
Sbjct: 531 SRQRPIMIHRALFGSIERFFGVLTEHYAGAFPAWLSPVQTVAIPITADQVEYLRGVEKAL 590

Query: 576 KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           ++  + +E D  ++ +  KIR H+ +K+P +++ G K+A   ++  R
Sbjct: 591 RAKGIRVEVDASDDRMQKKIRTHTTQKVPFLLLAGAKDAEAGAVSFR 637


>gi|299745880|ref|XP_001841372.2| tars protein [Coprinopsis cinerea okayama7#130]
 gi|298406796|gb|EAU80442.2| tars protein [Coprinopsis cinerea okayama7#130]
          Length = 720

 Score =  440 bits (1131), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 240/625 (38%), Positives = 367/625 (58%), Gaps = 22/625 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGS-DVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           +I +T PDGS +      T   DVA+ +S+SL++K V   ++ ++ DL  P+ +   +E+
Sbjct: 75  EITVTLPDGSERKATSWDTSPMDVAKEVSKSLSEKVVIAKVDDELWDLERPLEKSCKLEL 134

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELA 120
           +  + P    V  HS AH++ EA +  +    + +GP  +DGF+Y+    ++  ++ +  
Sbjct: 135 LDFDHPEGKKVFWHSSAHVLGEAAERHY-GCHLCLGPPTDDGFFYEMAINDRVVTNADYP 193

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES-IPAKENVTLYRQGEW 179
            +EK  +  +     F +  +S EK  E+F   K  YK  ++E+ +P   + T+YR G  
Sbjct: 194 ALEKISESAVKEKQKFERLVVSKEKLLEMFHYNK--YKKYLIETKVPDGTSTTVYRCGPM 251

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLC GPH+  TG++K F  + K + +Y+ GDSN   L RIYG ++  +++L++Y  FLE
Sbjct: 252 IDLCVGPHIPHTGKIKAFM-VTKNSSSYFLGDSNNDTLQRIYGISFPDKKQLSEYKKFLE 310

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQ 298
           E+ KRDHRK+ RE +L+   +   G  FW   G +I+ TL+  MR +  K  Y+E+ +P 
Sbjct: 311 EAAKRDHRKIGREQELWFFNDLSPGSCFWLPHGTRIYNTLVELMREEYFKRGYQEVISPN 370

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           + +  LW+ SGHW +Y+ +MF +    +       +ALKPMNCPGH  +F+   +SY+EL
Sbjct: 371 MYNSKLWETSGHWQNYKEDMFTLDVEKEK------WALKPMNCPGHCLIFDSRDRSYKEL 424

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG ++RNE SG+L GL RVR F QDD HVFC   Q+ +E   + + +  IY  F
Sbjct: 425 PIRMAEFGIIHRNEASGALTGLTRVRRFVQDDTHVFCMPSQLEDEISALFDFMRHIYGLF 484

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE   ++LSTRPE  +G    W+ AE+ +K  L+      Q  +N     G+GAFYGPK
Sbjct: 485 GFE-FHLELSTRPENFLGEIETWNQAEDQLKQALEK-HYPGQWELNP----GDGAFYGPK 538

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS-HSEKCHPVMIHRAVFGSIERFIGI 537
            +  ++DA+ R +QC TIQ+DF LP RFN  Y ++  SE   PV+IHRA+ GS+ERF+ I
Sbjct: 539 IDITIRDALKRSFQCATIQLDFQLPERFNLKYRSADESELTRPVIIHRAILGSLERFVAI 598

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E+F G  P WLSP Q +V  + +   EYA EIAN L S  L  + D    T+  KIR 
Sbjct: 599 VTEHFAGKWPFWLSPRQILVIPVAAPYKEYAAEIANRLTSLGLYADVDNGENTLPKKIRN 658

Query: 598 HSIKKIPIIIICGDKEASERSIGIR 622
             I +   I++ G +E   RS+ +R
Sbjct: 659 GEIAQYNFILVVGQEELDARSVNVR 683


>gi|311742315|ref|ZP_07716124.1| threonine--tRNA ligase [Aeromicrobium marinum DSM 15272]
 gi|311313943|gb|EFQ83851.1| threonine--tRNA ligase [Aeromicrobium marinum DSM 15272]
          Length = 661

 Score =  440 bits (1131), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 239/631 (37%), Positives = 360/631 (57%), Gaps = 49/631 (7%)

Query: 39  VAVAINGKVCDLSDPVREGSI-EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIG 97
           VA  ++G++ DLS  +  G + E +  + P  L ++RHS AH+MA+AVQ ++PE ++ IG
Sbjct: 36  VAARVDGELRDLSRELEAGDVVEAVAIDSPDGLDILRHSTAHVMAQAVQELFPEAKLGIG 95

Query: 98  PIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAY 157
           P I DGFYYDFD  +PF  ++L +IE +M++II     F ++ ++ ++AR   E   E Y
Sbjct: 96  PPITDGFYYDFDVAEPFVPEDLVKIESRMRKIIKEGQKFDRREVTDDQAR--VELADEPY 153

Query: 158 KVEI--LESIPAKEN-----------VTLY----RQGE--WFDLCRGPHVRSTGQVKKFF 198
           K+E+  L+S                 +T+Y    R G   W DLCRGPH+ +T ++  F 
Sbjct: 154 KLELIGLKSTAGDVAEGAGVEVGEGGLTIYDNLKRDGSVAWGDLCRGPHLPTTKRIPAF- 212

Query: 199 KLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI 258
            LM+ A AYWRGD     L R+YGTAW T++ L  +L+ +EE+++RDHR+L  E+DLF  
Sbjct: 213 TLMRSAAAYWRGDEKNKQLQRLYGTAWPTKEALEAHLFRIEEAQRRDHRRLGTELDLFSF 272

Query: 259 AED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
            ++ GSG+  +H +G  I + +  Y+RR+ I++ +E + TP +  + L+  SGH   Y  
Sbjct: 273 PDEIGSGLPVFHPRGGVIKREMEDYVRRRHIEEGFEYVGTPHIAKEGLFHTSGHLPYYGE 332

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            MF     D +      + LK MNCP H  +F    +SYRELP+R  EFG VYRNE SG 
Sbjct: 333 GMFPALDVDGS-----DYRLKAMNCPMHNLIFRSRGRSYRELPLRFFEFGHVYRNEKSGV 387

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR---PEK 433
           +HGL RVRGF QDD+H + T EQ   E   +   ++S+ +DFG +   ++LSTR    +K
Sbjct: 388 IHGLTRVRGFAQDDSHSYVTPEQAPGEIRHLLQFVLSLLRDFGLDDFYLELSTRDASKDK 447

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL----GEGAFYGPKFEYILKDAIGR 489
            +GSD  W  A  +++ V           + +G+ L    G  A+YGPK     +DAIGR
Sbjct: 448 FIGSDEDWATATKVLEDVC----------LESGLELVPDPGGAAYYGPKVSVQARDAIGR 497

Query: 490 DWQCGTIQVDFNLPS--RFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
            WQ  TIQ DFN PS  RFN  YV +   +  PVMIH A FGSIERF+G+++E++ G  P
Sbjct: 498 SWQMSTIQYDFNQPSPERFNLEYVAADGSRRQPVMIHSAKFGSIERFMGVLVEHYAGAFP 557

Query: 548 LWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIII 607
            WL+P+Q +   +     +Y   +   L++  +  E D  +E +  KIR    +K+P ++
Sbjct: 558 PWLAPVQVVGIPVAERHADYLVNLTARLRALGIRAEVDHSDERMQKKIRNAQTQKVPFML 617

Query: 608 ICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           + GD +    ++  R         V+L +AI
Sbjct: 618 LAGDNDIDGGAVSFRYRNGEQDNGVALDEAI 648


>gi|24583842|ref|NP_723726.1| Threonyl-tRNA synthetase, isoform C [Drosophila melanogaster]
 gi|28574141|ref|NP_524839.3| Threonyl-tRNA synthetase, isoform B [Drosophila melanogaster]
 gi|7297922|gb|AAF53167.1| Threonyl-tRNA synthetase, isoform B [Drosophila melanogaster]
 gi|22946308|gb|AAN10805.1| Threonyl-tRNA synthetase, isoform C [Drosophila melanogaster]
          Length = 690

 Score =  439 bits (1130), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 246/645 (38%), Positives = 365/645 (56%), Gaps = 24/645 (3%)

Query: 5   IKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG--SIEI 61
           IK+T PDG  +       T  +VA  IS+ LA   V   +NG+V DL D V EG  ++++
Sbjct: 52  IKVTLPDGKQVDATSWETTPYEVARGISQGLADNTVISKVNGEVWDL-DRVLEGNCTLQL 110

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELA 120
           +  +DP + AV  HS AHIM EA++ I+    +  GP IE+GFYYD   E +  S+++  
Sbjct: 111 LKFDDPEAQAVFWHSSAHIMGEAMERIYGG-HLCYGPPIENGFYYDMHLEGEGISTNDYG 169

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            +E  +++I+     F +  +      E+F  K   +KV IL      +  T+Y+ G   
Sbjct: 170 AMEGLVKQIVKEKQNFERLEMKKSDLLEMF--KYNEFKVRILNEKVTTDRTTVYKCGSLI 227

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHVR TG+VK   K+ K +  YW G ++   L R+YG ++   ++L ++    EE
Sbjct: 228 DLCRGPHVRHTGKVKAL-KITKNSSTYWEGKADAETLQRVYGISFPDPKQLKEWEKLQEE 286

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQV 299
           + KRDHRK+ RE +LF   E   G  F+  +G  I+ TL+ +++ +  K  ++E+ +P +
Sbjct: 287 AAKRDHRKIGREQELFFFHELSPGSCFFQPRGAHIYNTLMGFIKAEYRKRGFQEVISPNI 346

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +  LW  SGHW  Y  NMF+ +   +       FALKPMNCPGH  +F++  +S+RELP
Sbjct: 347 YNAKLWMTSGHWQHYAENMFSFEAEKEK------FALKPMNCPGHCLIFDNRNRSWRELP 400

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+A+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E       +  +Y  FG
Sbjct: 401 LRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAPEQIKSEMKGCLEFLKYVYTIFG 460

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F   +V LSTRP+  +G    W+DAE  +   L+      ++        G+GAFYGPK 
Sbjct: 461 FSFQLV-LSTRPDNYLGELEQWNDAEKALAESLNEFGMPWKENP------GDGAFYGPKI 513

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +  + DA+ R  QC TIQ+DF LP RFN  Y+    EK  PV+IHRA+ GS+ER I I+ 
Sbjct: 514 DITIMDALKRAHQCATIQLDFQLPIRFNLSYIADDGEKKRPVIIHRAILGSVERMIAILT 573

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF-RNETINYKIREH 598
           ENF G  P WLSP Q +V  +  +  +YAQ + + L       E D    +T+N KIR  
Sbjct: 574 ENFAGKWPFWLSPRQVMVVPVGPAYDQYAQSVRDQLHDAGFMSEADCDAGDTMNKKIRNA 633

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            + +   I++ GDKE S  ++ +R   +    +VS+ + I  L K
Sbjct: 634 QLAQFNFILVVGDKERSSNTVNVRTRDNKVHGEVSVAELITKLQK 678


>gi|300767159|ref|ZP_07077071.1| threonine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
 gi|300494978|gb|EFK30134.1| threonine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
          Length = 688

 Score =  439 bits (1130), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 239/656 (36%), Positives = 377/656 (57%), Gaps = 27/656 (4%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           + I + FPDG+ K F    T   +A+SIS SLAK++VA   N ++ D   P+  +GSIEI
Sbjct: 36  ASINVKFPDGAEKQFDAGVTTEAIAKSISPSLAKRSVAGKFNDQIVDYRQPLTTDGSIEI 95

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE----QPFSSD 117
           I  +    L V+R + A ++A AV+ ++P +    G    +GF++D D      +  S D
Sbjct: 96  IAADSEDGLNVLRQTAAQVLANAVKQLFPNIHFGSGEGNANGFFFDTDNPDEDGKQVSED 155

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN--VTLYR 175
           +L  I  KM  II +D P  ++ LS  KA  L       Y+ +++    A  N  V +Y+
Sbjct: 156 DLEAISDKMAAIIKQDLPIEREVLS--KADALALVGDNPYQQDLVNERAAANNDQVVVYK 213

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
           QG++ DL  G  + STG+VK  FKL+ VAGAYW+G S+ PML RIYGTA+  Q++L   L
Sbjct: 214 QGDFVDLSDGAQLASTGKVK-VFKLLSVAGAYWQGKSSNPMLQRIYGTAFLKQKDLDADL 272

Query: 236 YFLEESEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEE 293
              +E+ +RDHR +  E+DLF +  + G+G+ +W   G  I + +  Y+  +++ + Y+ 
Sbjct: 273 KRRQEARERDHRVIGNELDLFFVDPKVGNGLPYWMPNGATIRRQIERYIIDKEVANGYQH 332

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           + TP + +  +++QSGHWD YR +MF        + D     L+PMNCP H+ ++NH ++
Sbjct: 333 VYTPVLANLDVYKQSGHWDHYREDMFPPM----DMGDGEQLELRPMNCPSHIQIYNHHIR 388

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYRELP+R+AE G ++R E SG+L GL RVR  T +D H F   +Q+  E  KI +L++ 
Sbjct: 389 SYRELPLRIAELGMMHRYEKSGALTGLSRVREMTLNDGHTFVALDQIEEEFKKILSLMVE 448

Query: 414 IYKDFGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL 469
           +Y+DF       +LS R     EK    DA+W+ ++ ++K  +D +       ++     
Sbjct: 449 VYEDFDISDYRFRLSYRDPENKEKYFDDDAMWERSQKMLKSAMDDMG------LDYFEAE 502

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG 529
           GE AFYGPK +   K A+G +    TIQ+DF LP RF+  YV +  E+  PVMIHR +  
Sbjct: 503 GEAAFYGPKLDVQTKTALGGEETLSTIQLDFLLPERFDLKYVGADGEEHRPVMIHRGLVS 562

Query: 530 SIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRN 588
           ++ERF+  + E +KG  P WL+P Q  +  + + A   YA+ +   L +  + +  D RN
Sbjct: 563 TMERFVAYLTEIYKGAFPTWLAPKQVTIIPVNNGAHGAYAETVRRRLAAEGVRVSIDDRN 622

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           E + YKIRE   KK+P +++ GD+E +  S+ +R++G   T+  ++   I  +T+E
Sbjct: 623 EKMGYKIRESQTKKVPYLLVVGDQEVANGSVSVRKYGEERTESEAVDMFIGAITQE 678


>gi|195472319|ref|XP_002088448.1| Aats-thr [Drosophila yakuba]
 gi|194174549|gb|EDW88160.1| Aats-thr [Drosophila yakuba]
          Length = 747

 Score =  439 bits (1130), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 246/645 (38%), Positives = 367/645 (56%), Gaps = 24/645 (3%)

Query: 5   IKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG--SIEI 61
           IK+T PDG  +       T  +VA  IS+ LA   V   +NG+V DL D V E   ++++
Sbjct: 109 IKVTLPDGKQVDATSWETTPYEVARGISQGLADNTVISKVNGEVWDL-DRVLESNCTLQL 167

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELA 120
           +  +DP + AV  HS AHIM EA++ I+    +  GP I++GFYYD   + +  S+++  
Sbjct: 168 LKFDDPEAQAVFWHSSAHIMGEAMERIYGG-HLCYGPPIDNGFYYDMHLDGEGISTNDYG 226

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            +E  +++I+     F +  +      E+F  K   +KV IL      +  T+Y+ G   
Sbjct: 227 AMEGLVKQIVKEKQNFERLEMKKSDLLEMF--KYNEFKVRILNEKVTTDRTTVYKCGSLI 284

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHVR TG+VK   K+ K +  YW G ++   L R+YG ++   ++L ++    EE
Sbjct: 285 DLCRGPHVRHTGKVKAL-KITKNSSTYWEGKADAETLQRVYGISFPDPKQLKEWEKLQEE 343

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQV 299
           + KRDHRK+ RE +LF   E   G  F+  +G  I+ TL+S+M+ +  K  ++E+ +P +
Sbjct: 344 AAKRDHRKIGREQELFFFHELSPGSCFFQPRGAHIYNTLMSFMKAEYRKRGFQEVISPNI 403

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +  LW  SGHW  Y  NMF+ +   +T      FALKPMNCPGH  +F++  +S+RELP
Sbjct: 404 YNAKLWMTSGHWQHYAENMFSFEAEKET------FALKPMNCPGHCLIFDNRNRSWRELP 457

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+A+FG ++RNE SG+L GL RVR F QDDAH+FCT EQ+ +E       +  +Y  FG
Sbjct: 458 LRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCTPEQIKSEMKGCLEFLHHVYTIFG 517

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F   +V LSTRP+  +G    W+ AE  +   L+      ++        G+GAFYGPK 
Sbjct: 518 FSFQLV-LSTRPDNYLGELEQWNAAEKALAESLNEFGMPWKENP------GDGAFYGPKI 570

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +  + DA+ R  QC TIQ+DF LP RFN  Y+    EK  PV+IHRA+ GS+ER I I+ 
Sbjct: 571 DITIMDALKRAHQCATIQLDFQLPIRFNLSYIADDGEKKRPVIIHRAILGSVERMIAILT 630

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF-RNETINYKIREH 598
           ENF G  P WLSP Q +V  +  +  +YAQ + + L +     E D    +T+N KIR  
Sbjct: 631 ENFAGKWPFWLSPRQVMVVPVGPAYDQYAQSVRDQLHAAGFMSEADCDAGDTMNKKIRNA 690

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            + +   I++ GDKE S  ++ +R   +    +VS+ + I  L K
Sbjct: 691 QLAQFNFILVVGDKERSSNTVNVRTRDNKVHGEVSVAELITKLQK 735


>gi|147899539|ref|NP_001087812.1| threonyl-tRNA synthetase [Xenopus laevis]
 gi|51895835|gb|AAH81263.1| MGC86352 protein [Xenopus laevis]
          Length = 721

 Score =  439 bits (1130), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 252/626 (40%), Positives = 360/626 (57%), Gaps = 27/626 (4%)

Query: 5   IKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEII 62
           IK+T PDG  +      +T   +A  IS+ LA   V   +NG V DL  P+ E  ++ ++
Sbjct: 81  IKVTLPDGKQVDAESWKSTPYQIACGISQGLADNTVVAKVNGAVWDLDRPLEEDCTLALL 140

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQ 121
             +D  + AV  HS AHIM EA++ ++    +  GP IE+GFYYD +  +   SS++   
Sbjct: 141 KFDDEEAQAVYWHSSAHIMGEAMERVYGGC-LCYGPPIENGFYYDMYLDDGGVSSNDFTS 199

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +E   ++I+     F +  +S E   E+F+  K  +K  IL         T+YR G   D
Sbjct: 200 LENLCKKIMKEKQQFERLEVSKETLLEMFKYNK--FKCRILNEKVDTPTTTVYRCGPLID 257

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHVR TG++K   K+ K +  YW G ++   L R+YG ++   + L ++  F EE+
Sbjct: 258 LCRGPHVRHTGKIKAL-KVHKNSSTYWEGKADMETLQRVYGISFPDPKMLKEWEKFQEEA 316

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVL 300
           + RDHRKL +E +LF   E   G  F+  KG  I+  LI ++R++  K  ++E+ TP V 
Sbjct: 317 KNRDHRKLGKEQELFFFHELSPGSCFFLPKGAYIYNQLIGFIRQEYRKRGFQEVVTPNVY 376

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  LWQ SGHW  Y  NMF+ +   +       FALKPMNCPGH  +F+H  +S+RELP+
Sbjct: 377 NSKLWQTSGHWQHYSENMFSFEVEKEI------FALKPMNCPGHCLMFDHRPRSWRELPM 430

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+A+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+  E     + + S+Y  FGF
Sbjct: 431 RMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEEEIKSCLDFLRSVYNVFGF 490

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL-LGEGAFYGPKF 479
               + LSTRPEK +G   +W+ AE         ++NS  +     VL  G+GAFYGPK 
Sbjct: 491 -TFKLNLSTRPEKFLGDIEVWNQAEK-------QLENSLNEFGEKWVLNPGDGAFYGPKI 542

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH--SEKCHPVMIHRAVFGSIERFIGI 537
           +  +KDAIGR  QC TIQ+DF LP RFN  YV SH   +K  PV+IHRA+ GS+ER I I
Sbjct: 543 DIQIKDAIGRYHQCATIQLDFQLPIRFNLTYV-SHDGDDKKRPVIIHRAILGSVERMIAI 601

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIR 596
           + ENF G  PLWLSP Q +V  +  +  EYAQ++        L  + D     T+N KIR
Sbjct: 602 LTENFGGKWPLWLSPQQVMVVPVGPTCDEYAQQVREQFHRAGLMTDVDLDPGCTLNKKIR 661

Query: 597 EHSIKKIPIIIICGDKEASERSIGIR 622
              + +   I++ G+KE +  ++ IR
Sbjct: 662 NAQLAQYNFILVVGEKEKASETVNIR 687


>gi|300787200|ref|YP_003767491.1| threonyl-tRNA synthetase [Amycolatopsis mediterranei U32]
 gi|299796714|gb|ADJ47089.1| threonyl-tRNA synthetase [Amycolatopsis mediterranei U32]
          Length = 675

 Score =  439 bits (1130), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 238/606 (39%), Positives = 349/606 (57%), Gaps = 45/606 (7%)

Query: 44  NGKVCDLS-DPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIED 102
            GK+ DL+  P  +  +E +        +VIRHS AH++A+AVQ  +P+ ++ IGP ++D
Sbjct: 47  EGKLRDLAWVPEADAEVEPVAANTEDGRSVIRHSAAHVLAQAVQQQFPDAKLGIGPPVKD 106

Query: 103 GFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQ-YLSHEKAR----------ELFE 151
           GFYYDF  ++PF+ ++L  +EK+M++I+     F ++ + S ++AR          EL +
Sbjct: 107 GFYYDFAVDKPFTPEDLQALEKRMKQIVKGAQQFSRRVFDSVDEARKELADEPFKLELVD 166

Query: 152 SKKEAYKVEILESIPAKENVTLY-------RQGEWFDLCRGPHVRSTGQVKKFFKLMKVA 204
            K E    E++E    +  +T+Y       ++  W DLCRGPHV +T  +  F KL +VA
Sbjct: 167 LKSEVDTSEVMEV--GEGELTIYDNLDPRTKERVWSDLCRGPHVPTTKFIPAF-KLTRVA 223

Query: 205 GAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GS 263
            AYWRG    P L RIYGTAW + +    YL  + E+E+RDHRKL  E+DLF   E+ GS
Sbjct: 224 AAYWRGSEKNPQLQRIYGTAWESAEAQDAYLERIAEAERRDHRKLGAELDLFSFPEEIGS 283

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK 322
           G+  +H KG  I + L +Y RR+ ++  YE +NTP +    L+  SGH   Y   MF   
Sbjct: 284 GLPVFHPKGGIIRRELENYSRRRHEEAGYEFVNTPHISKGELFHTSGHLPYYADTMFPPV 343

Query: 323 CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMR 382
             D+       + LK MNCP H  +F    +SYRELP+RL EFG+VYR E SG +HGL R
Sbjct: 344 QFDE-----ENYYLKAMNCPMHNLIFRSRGRSYRELPLRLFEFGTVYRYEKSGVVHGLTR 398

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR--PEKRVGSDAL 440
           VRG T DD+H++CTKEQM  E   +   ++ +  D+G     ++LSTR   +K +G D  
Sbjct: 399 VRGLTMDDSHIYCTKEQMPGELRSLLKFVLDLLADYGLSDFYLELSTRGDSDKFIGEDWE 458

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLL----GEGAFYGPKFEYILKDAIGRDWQCGTI 496
           W++A   ++          Q  +++G+ L    G  AFYGPK     KDAIGR WQ  TI
Sbjct: 459 WEEATETLR----------QAAVDSGLELVPDPGGAAFYGPKISVQAKDAIGRTWQMSTI 508

Query: 497 QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI 556
           Q+DFN   RF   Y      +  PVMIHRA+FGSIERF G++ E++ G  P WLSP+Q +
Sbjct: 509 QLDFNQNKRFGLEYTAPDGSRQTPVMIHRALFGSIERFFGVLTEHYAGAFPAWLSPVQVV 568

Query: 557 VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASE 616
              IT+  VEY Q++   L++  L  E D  ++ +  KIR H+ +K+P +++ G K+   
Sbjct: 569 GIPITADQVEYLQDVEKALRAKGLRAEVDASDDRMQKKIRTHTTQKVPFMLLAGAKDVEA 628

Query: 617 RSIGIR 622
            ++  R
Sbjct: 629 GAVSFR 634


>gi|25013040|gb|AAN71609.1| RH56418p [Drosophila melanogaster]
 gi|220950596|gb|ACL87841.1| Aats-thr-PB [synthetic construct]
          Length = 711

 Score =  439 bits (1129), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 246/645 (38%), Positives = 365/645 (56%), Gaps = 24/645 (3%)

Query: 5   IKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG--SIEI 61
           IK+T PDG  +       T  +VA  IS+ LA   V   +NG+V DL D V EG  ++++
Sbjct: 73  IKVTLPDGKQVDATSWETTPYEVARGISQGLADNTVISKVNGEVWDL-DRVLEGNCTLQL 131

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELA 120
           +  +DP + AV  HS AHIM EA++ I+    +  GP IE+GFYYD   E +  S+++  
Sbjct: 132 LKFDDPEAQAVFWHSSAHIMGEAMERIYGG-HLCYGPPIENGFYYDMHLEGEGISTNDYG 190

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            +E  +++I+     F +  +      E+F  K   +KV IL      +  T+Y+ G   
Sbjct: 191 AMEGLVKQIVKEKQNFERLEMKKSDLLEMF--KYNEFKVRILNEKVTTDRTTVYKCGSLI 248

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHVR TG+VK   K+ K +  YW G ++   L R+YG ++   ++L ++    EE
Sbjct: 249 DLCRGPHVRHTGKVKAL-KITKNSSTYWEGKADAETLQRVYGISFPDPKQLKEWEKLQEE 307

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQV 299
           + KRDHRK+ RE +LF   E   G  F+  +G  I+ TL+ +++ +  K  ++E+ +P +
Sbjct: 308 AAKRDHRKIGREQELFFFHELSPGSCFFQPRGAHIYNTLMGFIKAEYRKRGFQEVISPNI 367

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +  LW  SGHW  Y  NMF+ +   +       FALKPMNCPGH  +F++  +S+RELP
Sbjct: 368 YNAKLWMTSGHWQHYAENMFSFEAEKEK------FALKPMNCPGHCLIFDNRNRSWRELP 421

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+A+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E       +  +Y  FG
Sbjct: 422 LRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAPEQIKSEMKGCLEFLKYVYTIFG 481

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F   +V LSTRP+  +G    W+DAE  +   L+      ++        G+GAFYGPK 
Sbjct: 482 FSFQLV-LSTRPDNYLGELEQWNDAEKALAESLNEFGMPWKENP------GDGAFYGPKI 534

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +  + DA+ R  QC TIQ+DF LP RFN  Y+    EK  PV+IHRA+ GS+ER I I+ 
Sbjct: 535 DITIMDALKRAHQCATIQLDFQLPIRFNLSYIADDGEKKRPVIIHRAILGSVERMIAILT 594

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF-RNETINYKIREH 598
           ENF G  P WLSP Q +V  +  +  +YAQ + + L       E D    +T+N KIR  
Sbjct: 595 ENFAGKWPFWLSPRQVMVVPVGPAYDQYAQSVRDQLHDAGFMSEADCDAGDTMNKKIRNA 654

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            + +   I++ GDKE S  ++ +R   +    +VS+ + I  L K
Sbjct: 655 QLAQFNFILVVGDKERSSNTVNVRTRDNKVHGEVSVAELITKLQK 699


>gi|24583839|ref|NP_723725.1| Threonyl-tRNA synthetase, isoform A [Drosophila melanogaster]
 gi|22946307|gb|AAF53166.2| Threonyl-tRNA synthetase, isoform A [Drosophila melanogaster]
 gi|211938559|gb|ACJ13176.1| FI05224p [Drosophila melanogaster]
          Length = 747

 Score =  439 bits (1129), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 246/645 (38%), Positives = 365/645 (56%), Gaps = 24/645 (3%)

Query: 5   IKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG--SIEI 61
           IK+T PDG  +       T  +VA  IS+ LA   V   +NG+V DL D V EG  ++++
Sbjct: 109 IKVTLPDGKQVDATSWETTPYEVARGISQGLADNTVISKVNGEVWDL-DRVLEGNCTLQL 167

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELA 120
           +  +DP + AV  HS AHIM EA++ I+    +  GP IE+GFYYD   E +  S+++  
Sbjct: 168 LKFDDPEAQAVFWHSSAHIMGEAMERIYGG-HLCYGPPIENGFYYDMHLEGEGISTNDYG 226

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            +E  +++I+     F +  +      E+F  K   +KV IL      +  T+Y+ G   
Sbjct: 227 AMEGLVKQIVKEKQNFERLEMKKSDLLEMF--KYNEFKVRILNEKVTTDRTTVYKCGSLI 284

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHVR TG+VK   K+ K +  YW G ++   L R+YG ++   ++L ++    EE
Sbjct: 285 DLCRGPHVRHTGKVKAL-KITKNSSTYWEGKADAETLQRVYGISFPDPKQLKEWEKLQEE 343

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQV 299
           + KRDHRK+ RE +LF   E   G  F+  +G  I+ TL+ +++ +  K  ++E+ +P +
Sbjct: 344 AAKRDHRKIGREQELFFFHELSPGSCFFQPRGAHIYNTLMGFIKAEYRKRGFQEVISPNI 403

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +  LW  SGHW  Y  NMF+ +   +       FALKPMNCPGH  +F++  +S+RELP
Sbjct: 404 YNAKLWMTSGHWQHYAENMFSFEAEKEK------FALKPMNCPGHCLIFDNRNRSWRELP 457

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+A+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E       +  +Y  FG
Sbjct: 458 LRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAPEQIKSEMKGCLEFLKYVYTIFG 517

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F   +V LSTRP+  +G    W+DAE  +   L+      ++        G+GAFYGPK 
Sbjct: 518 FSFQLV-LSTRPDNYLGELEQWNDAEKALAESLNEFGMPWKENP------GDGAFYGPKI 570

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +  + DA+ R  QC TIQ+DF LP RFN  Y+    EK  PV+IHRA+ GS+ER I I+ 
Sbjct: 571 DITIMDALKRAHQCATIQLDFQLPIRFNLSYIADDGEKKRPVIIHRAILGSVERMIAILT 630

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF-RNETINYKIREH 598
           ENF G  P WLSP Q +V  +  +  +YAQ + + L       E D    +T+N KIR  
Sbjct: 631 ENFAGKWPFWLSPRQVMVVPVGPAYDQYAQSVRDQLHDAGFMSEADCDAGDTMNKKIRNA 690

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            + +   I++ GDKE S  ++ +R   +    +VS+ + I  L K
Sbjct: 691 QLAQFNFILVVGDKERSSNTVNVRTRDNKVHGEVSVAELITKLQK 735


>gi|21428938|gb|AAM50188.1| GH20022p [Drosophila melanogaster]
          Length = 747

 Score =  439 bits (1128), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 246/645 (38%), Positives = 365/645 (56%), Gaps = 24/645 (3%)

Query: 5   IKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG--SIEI 61
           IK+T PDG  +       T  +VA  IS+ LA   V   +NG+V DL D V EG  ++++
Sbjct: 109 IKVTLPDGKQVDATSWETTPYEVARGISQGLADNTVISKVNGEVWDL-DRVLEGNCTLQL 167

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELA 120
           +  +DP + AV  HS AHIM EA++ I+    +  GP IE+GFYYD   E +  S+++  
Sbjct: 168 LKFDDPEAQAVFWHSSAHIMGEAMERIYGG-HLCYGPPIENGFYYDMHLEGEGISTNDYG 226

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            +E  +++I+     F +  +      E+F  K   +KV IL      +  T+Y+ G   
Sbjct: 227 AMEGLVKQIVKEKQNFERLEMKKSDLLEMF--KYNEFKVRILNEKVTTDRTTVYKCGSLI 284

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHVR TG+VK   K+ K +  YW G ++   L R+YG ++   ++L ++    EE
Sbjct: 285 DLCRGPHVRHTGKVKAL-KITKNSPTYWEGKADAETLQRVYGISFPDPKQLKEWEKLQEE 343

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQV 299
           + KRDHRK+ RE +LF   E   G  F+  +G  I+ TL+ +++ +  K  ++E+ +P +
Sbjct: 344 AAKRDHRKIGREQELFFFHELSPGSCFFQPRGAHIYNTLMGFIKAEYRKRGFQEVISPNI 403

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +  LW  SGHW  Y  NMF+ +   +       FALKPMNCPGH  +F++  +S+RELP
Sbjct: 404 YNAKLWMTSGHWQHYAENMFSFEAEKEK------FALKPMNCPGHCLIFDNRNRSWRELP 457

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+A+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E       +  +Y  FG
Sbjct: 458 LRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAPEQIKSEMKGCLEFLKYVYTIFG 517

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F   +V LSTRP+  +G    W+DAE  +   L+      ++        G+GAFYGPK 
Sbjct: 518 FSFQLV-LSTRPDNYLGELEQWNDAEKALAESLNEFGMPWKENP------GDGAFYGPKI 570

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +  + DA+ R  QC TIQ+DF LP RFN  Y+    EK  PV+IHRA+ GS+ER I I+ 
Sbjct: 571 DITIMDALKRAHQCATIQLDFQLPIRFNLSYIADDGEKKRPVIIHRAILGSVERMIAILT 630

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF-RNETINYKIREH 598
           ENF G  P WLSP Q +V  +  +  +YAQ + + L       E D    +T+N KIR  
Sbjct: 631 ENFAGKWPFWLSPRQVMVVPVGPAYDQYAQSVRDQLHDAGFMSEADCDAGDTMNKKIRNA 690

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            + +   I++ GDKE S  ++ +R   +    +VS+ + I  L K
Sbjct: 691 QLAQFNFILVVGDKERSSNTVNVRTRDNKVHGEVSVAELITKLQK 735


>gi|47575750|ref|NP_001001219.1| threonyl-tRNA synthetase [Xenopus (Silurana) tropicalis]
 gi|301626626|ref|XP_002942489.1| PREDICTED: threonyl-tRNA synthetase, cytoplasmic-like [Xenopus
           (Silurana) tropicalis]
 gi|45709710|gb|AAH67949.1| threonyl-tRNA synthetase-like 2 [Xenopus (Silurana) tropicalis]
          Length = 721

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 250/626 (39%), Positives = 362/626 (57%), Gaps = 27/626 (4%)

Query: 5   IKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEII 62
           IK+T PDG  +      +T   +A  IS+ LA   V   +NG V DL  P+ E  ++ ++
Sbjct: 81  IKVTLPDGKQVDAESWKSTPYQIACGISQGLADNTVVAKVNGSVWDLDRPLEEDCTLALL 140

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQ 121
             +D  + AV  HS AHIM EA++ ++    +  GP IE+GFYYD + ++   SS++   
Sbjct: 141 KFDDEEAQAVYWHSSAHIMGEAMERVYGGC-LCYGPPIENGFYYDMYLEDGGVSSNDFTS 199

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +E   ++I+     F +  ++ E   E+F+  K  +K  IL         T+YR G   D
Sbjct: 200 LENLCKKIMKEKQQFERLEVTKETLLEMFKYNK--FKCRILNEKVDTPTTTVYRCGPLID 257

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHVR TG++K   K+ K +  YW G ++   L R+YG ++   + L ++  F EE+
Sbjct: 258 LCRGPHVRHTGKIKAL-KVHKNSSTYWEGKADMETLQRVYGISFPDPKMLKEWEKFQEEA 316

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVL 300
           + RDHRK+ RE +LF   E   G  F+  KG  I+  LI+++R++  K  ++E+ TP V 
Sbjct: 317 KNRDHRKIGREQELFFFHELSPGSCFFLPKGAYIYNQLIAFIRQEYRKRGFQEVVTPNVY 376

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  LWQ SGHW  Y  NMF+ +   +       FALKPMNCPGH  +F+H  +S+RELP+
Sbjct: 377 NSKLWQTSGHWQHYSENMFSFEVEKEI------FALKPMNCPGHCLMFDHRPRSWRELPL 430

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+A+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+  E     + + ++Y  FGF
Sbjct: 431 RMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEEEIKSCLDFLRAVYNVFGF 490

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL-LGEGAFYGPKF 479
               + LSTRPEK +G   +W+ AE         ++NS  +     VL  G+GAFYGPK 
Sbjct: 491 -TFKLNLSTRPEKFLGDIEVWNQAEK-------QLENSLNEFGEKWVLNPGDGAFYGPKI 542

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH--SEKCHPVMIHRAVFGSIERFIGI 537
           +  +KDAIGR  QC TIQ+DF LP RFN  YV SH   +K  PV+IHRA+ GS+ER I I
Sbjct: 543 DIQIKDAIGRYHQCATIQLDFQLPIRFNLTYV-SHDGDDKKRPVIIHRAILGSVERMIAI 601

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIR 596
           + ENF G  PLWLSP Q +V  +  +  EYAQ++        L  + D     T+N KIR
Sbjct: 602 LTENFGGKWPLWLSPQQVMVVPVGPTCDEYAQQVREQFHRAGLMTDVDLDPGCTLNKKIR 661

Query: 597 EHSIKKIPIIIICGDKEASERSIGIR 622
              + +   I++ G+KE +  ++ IR
Sbjct: 662 NAQLAQYNFILVIGEKEKASGTVNIR 687


>gi|118095671|ref|XP_413774.2| PREDICTED: hypothetical protein [Gallus gallus]
          Length = 903

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 245/645 (37%), Positives = 370/645 (57%), Gaps = 23/645 (3%)

Query: 5   IKLTFPDGSIKNFPV-HATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           IK+T  DG I +      T   +A  IS+ LA  AV   +NG++ DL  P+  + ++E++
Sbjct: 263 IKITLTDGKIADGESWKTTPYQLAVGISQGLASNAVIAKVNGELWDLDRPLEGDCTLELL 322

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQ 121
           T +D  + AV  HS AHI+ EA++  +    +  GP IE+GFYYD + +++  SS E   
Sbjct: 323 TFDDQEAQAVYWHSSAHILGEAMEGYYGGC-LCYGPPIENGFYYDMYIEDRGVSSTEFPA 381

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +E + + II    PF +  +  E   ++F+  K  +K  IL         T+YR G   D
Sbjct: 382 LENRCKNIIKEKQPFERLEVKKEILLDMFKYNK--FKCRILNEKVNTPTTTVYRCGPLID 439

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHVR TG++K   K+ K +  YW G ++   L RIYG ++   + + ++  F EE+
Sbjct: 440 LCRGPHVRHTGKIKAL-KIFKNSSTYWEGKADMETLQRIYGISFPDNKMMKEWEKFQEEA 498

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVL 300
             RDHRK+ +E +LF   +   G  F+  +G  ++ TL  ++R +  + ++ E+ +P + 
Sbjct: 499 RNRDHRKIGKEQELFFFHDLSPGSCFFLPRGAFLYNTLTDFIREEYHRRNFTEVVSPNIF 558

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  LW+ SGHW  Y  NMF+ +   +T      FALKPMNCPGH  +F H  +S+RE+P+
Sbjct: 559 NSKLWETSGHWQHYSENMFSFEIEKET------FALKPMNCPGHCLMFAHRPRSWREMPL 612

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLA+FG ++RNE SG+L GL RVR F QDDAH++CT EQ+  E     + + S+Y  FGF
Sbjct: 613 RLADFGVLHRNELSGTLSGLTRVRRFQQDDAHIYCTIEQIEEEIKGCLDFLKSVYSIFGF 672

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
               + LSTRPE  +G   +WD AE  ++  LD      Q  +N     G+GAFYGPK +
Sbjct: 673 -TFQLHLSTRPENYLGELEIWDHAEKQLQNSLDNF--GVQWTLNP----GDGAFYGPKID 725

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIGIMI 539
             +KDA+GR  QC TIQ+DF LP RFN  YV     +K  PV+IHRAV GS+ER I I+ 
Sbjct: 726 IKIKDALGRYHQCATIQLDFQLPIRFNLTYVGKDGDDKKRPVIIHRAVLGSVERMIAILA 785

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF-RNETINYKIREH 598
           EN+ G  P WLSP Q +V  +  ++ EYAQ++ +         + D  ++ T+N KIR  
Sbjct: 786 ENYGGKWPFWLSPRQVMVVPVGPTSEEYAQQVCSEFFEAGFMSDVDLDQSCTLNKKIRNA 845

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            + +   I++ G+KE +  ++ +R   +    ++S+  AI  L K
Sbjct: 846 QLAQYNFILVVGEKEKANHAVNVRTRDNKVHGEISVSSAIEKLKK 890


>gi|326693745|ref|ZP_08230750.1| threonyl-tRNA synthetase [Leuconostoc argentinum KCTC 3773]
          Length = 654

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 237/647 (36%), Positives = 371/647 (57%), Gaps = 26/647 (4%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
           S+IKLTFPDG++K FP   T   VAESIS+SLAKK+V+  ++G    + D +   G  ++
Sbjct: 2   SEIKLTFPDGAVKEFPAGTTPLVVAESISKSLAKKSVSAKLDGAYVGMHDVIPASGDFQL 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSI--WPEVQVAIGPIIEDGFYYDFDKE--QPFSSD 117
           IT  D  +L ++RHS +H++A+A++ +  +  +   +GP IE+GFYYD D       + +
Sbjct: 62  ITMADDEALDLLRHSASHLLAQALKRLPKFANMHFGVGPFIENGFYYDTDNGAGNQVTVE 121

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           + A+IE  M +I   D P + + +S ++A  +F    + YKVE++  +P    +T+  QG
Sbjct: 122 DFAEIEAMMHKIAKEDLPIVSREVSRDEALAMFAD--DPYKVELISDLPEDATITIAVQG 179

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           +  +L +G  V STG +K F KL  VAGAYWRG S+ PM+ RIYG A   Q ++   L  
Sbjct: 180 DHVELDKGGLVPSTGWLKHF-KLTSVAGAYWRGKSSNPMMQRIYGIAEWKQADVEAELQR 238

Query: 238 LEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEIN 295
            EE+++RDHR + R+MDLF  +++ GSG+  W   G  I + +  Y+  K + + Y+ + 
Sbjct: 239 REEAKERDHRTIGRDMDLFFTSQEVGSGLPVWLPNGATIRRQVERYITDKELANGYQHVY 298

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP + + +L++ SGHWD YR +MF        + D     L+PMNCP H+ VF H  +SY
Sbjct: 299 TPVLSNLNLYKTSGHWDHYREDMFPPM----DMGDGEFLELRPMNCPSHIMVFKHKPRSY 354

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP+R+AE G ++R E SG+L GL RVR  T +D H F   E++  E   I  +++ +Y
Sbjct: 355 RELPIRIAELGMMHRYEKSGALTGLSRVREMTLNDGHTFVEPEKLEEEFKSILTMMMEVY 414

Query: 416 KDFGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
           +DF       +LS R     EK    D +W+ ++  +K  +D +       ++     GE
Sbjct: 415 RDFNITDYRFRLSYRDPKNTEKYFDDDEMWEKSQAQLKRAMDDLG------LDYYEAEGE 468

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH-PVMIHRAVFGS 530
            AFYGPK +   K A+G +    TIQ+DF LP RFN  Y+ +  +  H PVM+HR + G+
Sbjct: 469 AAFYGPKLDVQTKTALGNEETMSTIQLDFLLPERFNLTYIGADGQDNHRPVMLHRGIVGT 528

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNE 589
           +ERF   +IE +KG  P WL+P+Q  +  +   A   YA++I   L+   L    + ++ 
Sbjct: 529 MERFTAYLIEMYKGAFPTWLAPLQVQIIPVNLGAHGAYAEQIKKQLQDAGLRANVETKDA 588

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
            + Y IRE    KIP  ++ GD E   +++ +R++G   T  + + D
Sbjct: 589 KMGYLIREAQTNKIPYTLVLGDSEVEGQTVTVRKYGEEKTTTMPIAD 635


>gi|307169877|gb|EFN62386.1| Threonyl-tRNA synthetase, cytoplasmic [Camponotus floridanus]
          Length = 689

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 241/630 (38%), Positives = 361/630 (57%), Gaps = 30/630 (4%)

Query: 2   PSDIKLTFPDGS-IKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           P DI +T PDG  +       T  +VA++IS+ LA   V   +N ++ DL  P+  +  +
Sbjct: 47  PVDITVTLPDGKEVSAQSWRTTPYEVAKNISQGLADNTVIAKVNNELWDLDRPLEYDCKL 106

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDE 118
           +++  +D     V  HS AHI+ EA++ I+    +  GP IE+GFYYD +  ++  S+ +
Sbjct: 107 QLLKFDDAEGRQVFWHSSAHILGEAMERIYGGC-LCYGPPIENGFYYDMYIGDKGISNTD 165

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
              +E   + I     PF +  ++ +   E+F  K   +K+ I+         T+Y+ G 
Sbjct: 166 FPYLENMYKNIAKEKQPFERLVMTKKDLMEMF--KYNEFKIRIIAEKIHTPTTTVYKCGP 223

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLCRGPHVR TG++K   K+ K +  YW G++N   L RIYG ++   ++L ++  F 
Sbjct: 224 LIDLCRGPHVRHTGKIKAL-KITKNSSTYWEGNANAESLQRIYGISFPDTKQLKEWEKFQ 282

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
           EE+ KRDHRK+ +E +LF   E   G  F+  +G  I+ TL+ ++R +  K  ++E+ +P
Sbjct: 283 EEAAKRDHRKIGKEQELFFFHELSPGSCFFQPRGAYIYNTLVEFIRSEYRKRGFQEVISP 342

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  LWQ SGHW  Y  NMF+     +T      FALKPMNCPGH  +F+   +S+RE
Sbjct: 343 NIYNSKLWQTSGHWQHYAENMFSFDVEKET------FALKPMNCPGHCMIFDVRCRSWRE 396

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+A+FG ++RNE SG+L GL RVR F QDDAH+FC+ EQ+ +E +     +  +Y  
Sbjct: 397 LPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCSVEQIKDEMIAALEFLRHVYGI 456

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKN----SSQDRINTGVLLGEGA 473
           FGF    + LSTRPEK +GS  +WD AE  ++  L+        + QD          GA
Sbjct: 457 FGF-TFNLCLSTRPEKYLGSLKVWDRAEKALEESLNAFGQPWTLNPQD----------GA 505

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  L DA+ R  Q  TIQ+DF LP RFN  YVN + EK  PV+IHRA+ GS+ER
Sbjct: 506 FYGPKIDITLMDALKRAHQTATIQLDFQLPMRFNLSYVNENGEKTRPVIIHRAILGSVER 565

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF-RNETIN 592
            I I+ E++ G  P WLSP QA+V  + S   EYA E+   L    + +E D   ++T+N
Sbjct: 566 MIAILTESYGGKWPYWLSPRQAMVVPVVSQFDEYAYEVKQKLWDAGVMVEVDTDSSDTLN 625

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIR 622
            KIR   + +   I++ G+KE +  ++ IR
Sbjct: 626 KKIRNAQLAQFNFILVVGEKERNAGTVNIR 655


>gi|81429010|ref|YP_396010.1| threonyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
 gi|123742216|sp|Q38VT0|SYT_LACSS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|78610652|emb|CAI55703.1| Threonyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
          Length = 656

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 239/633 (37%), Positives = 368/633 (58%), Gaps = 24/633 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEI 61
           ++I+LTFPDG+ K F    +  DVA+SIS SLAKKA+A   NG+V DL  P+ E G+IEI
Sbjct: 2   AEIQLTFPDGAQKTFEQATSLLDVAKSISTSLAKKAIAGKFNGEVVDLQQPLLEDGAIEI 61

Query: 62  ITPEDPR-SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDEL 119
           IT +D   +L    H+ A ++A  +   +PE+Q       EDGFYYD D E    +  +L
Sbjct: 62  ITKDDQAVNLTATWHTAAFVLAATLSQHYPEMQFGEVTATEDGFYYDTDNEAGQVAVTDL 121

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +I+ +M ++I       +  +S + A++LF    + YK+ +L+ + A + V +Y+ G++
Sbjct: 122 PEIKTEMAKLIQSGEAISRVSVSKDDAKKLFAG--QTYKLALLDEVEA-DQVLVYQLGDY 178

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            D    P +     VK FF+L+ VAGAYW+G S+  ML RIYGTA+  Q+EL   L   +
Sbjct: 179 SDFSLAPMLGKVSDVK-FFELLSVAGAYWQGKSSNQMLQRIYGTAYPKQEELDADLKRRQ 237

Query: 240 ESEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTP 297
           E+++RDHR +  ++DLF +  + G+G+ +W   G  I +++  Y+  +++ + YE + TP
Sbjct: 238 EAKERDHRVIGNQLDLFFVDPKVGAGLPYWLPNGATIRRSIERYIIDKEVANGYEHVYTP 297

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  L++QSGHWD YR +MF        + D     L+PMNCP H+ V+ H  +SYRE
Sbjct: 298 ILANLDLYKQSGHWDHYREDMFPPM----DMGDGEMLELRPMNCPSHIQVYKHHPRSYRE 353

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E   I  L+I +Y D
Sbjct: 354 LPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIQDEFKSILGLMIDVYAD 413

Query: 418 FGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           F       +LS R     EK    D +W+ A+ ++KG +D +     D +      GE A
Sbjct: 414 FNINDYTFRLSYRDPANTEKYFDDDEMWNKAQAMLKGAMDDL---GLDYVEAE---GEAA 467

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +   K A+G +    TIQ+DF LP RF+  YV    E   PVMIHR +  ++ER
Sbjct: 468 FYGPKLDVQTKTAMGNEETLSTIQLDFMLPERFDLHYVGEDGEMHRPVMIHRGLVSTMER 527

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETIN 592
           F   + E +KG  P WL+P QA++  + +    +YA+ I + +    L +  D RNE + 
Sbjct: 528 FTAYLTEIYKGAFPTWLAPTQAVIIPVKNDLHYDYAKNIKDEMIKRGLRVRIDDRNEKMG 587

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
           YKIRE    KIP  ++ GD+E ++ ++ +R++G
Sbjct: 588 YKIREAQTSKIPYTLVVGDQELAQATVSVRKYG 620


>gi|149499809|ref|XP_001513531.1| PREDICTED: similar to threonyl-tRNA synthetase-like 2, partial
           [Ornithorhynchus anatinus]
          Length = 677

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 248/645 (38%), Positives = 367/645 (56%), Gaps = 23/645 (3%)

Query: 5   IKLTFPDGS-IKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           I++T  DG  I+      T   VA  IS +LA   V   +NG++ DL  P+  + ++E++
Sbjct: 37  IQITLTDGKVIEGESWKTTSYQVAAEISPALADNTVIAKVNGELWDLDRPLEGDSTLELL 96

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQ 121
           T E+  + AV  HS AHI+ EA+++ +    +  GP IE+GFYYD F +++  SS E   
Sbjct: 97  TFENEEAQAVYWHSSAHILGEAMENYYGGC-LCYGPPIENGFYYDMFLEDRGVSSTEFPS 155

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +E   + II    PF +  +S E   ++F+  K  +K  IL         T+YR G   D
Sbjct: 156 LENSCKAIIKEKQPFERLEISKEILLDMFKYNK--FKCRILNEKVDTPTTTVYRCGPLID 213

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHVR TG++K   K++K +  YW G ++   L RIYG ++   + +  +  F EE+
Sbjct: 214 LCRGPHVRHTGKIKTL-KILKNSSTYWEGKADMETLQRIYGISFPDSKMMKTWEKFQEEA 272

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVL 300
           + RDHRK+ +E +LF   +   G  F+  +G  ++ TL+ ++R +  K ++ E+ +P V 
Sbjct: 273 KNRDHRKIGKEQELFFFHDLSPGSCFFLPRGAFLYNTLLDFIREEYHKRNFTEVVSPNVY 332

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  LW+ SGHW  Y  NMF+     +T      FALKPMNCPGH  +F H  +S+RE+P+
Sbjct: 333 NSKLWETSGHWQHYSENMFSFDVEKET------FALKPMNCPGHCLMFAHRPRSWREMPI 386

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLA+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+  E       + S+Y  FGF
Sbjct: 387 RLADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCMMEQIEEEMKGCLQFLQSVYSVFGF 446

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
               + LSTRPE  +G    WD AE  ++  L         ++N     G+GAFYGPK +
Sbjct: 447 -SFQLNLSTRPENFLGEIETWDQAEKQLQNSLKEFGEPW--KLNP----GDGAFYGPKID 499

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIGIMI 539
             +KDAIGR  QC TIQ+DF LP RFN  YV+  S +K  PV+IHRA+ GS+ER I I+ 
Sbjct: 500 IKIKDAIGRYHQCATIQLDFQLPIRFNLTYVSKESDDKKRPVIIHRAILGSVERMIAILS 559

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF-RNETINYKIREH 598
           EN+ G  P WLSP Q +V  +  +  EYAQ+I +         + D  ++ T+N KIR  
Sbjct: 560 ENYGGKWPFWLSPRQVMVIPVGPTCEEYAQQIRSEFFEAGFMADVDLDQSSTLNKKIRNA 619

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            + +   I++ G+KE    ++ +R   +    ++S+  AI  L K
Sbjct: 620 QLAQYNFILVVGEKEKGNNAVNVRTRDNKIHGEISVNSAIEKLKK 664


>gi|255560023|ref|XP_002521030.1| threonyl-tRNA synthetase, putative [Ricinus communis]
 gi|223539867|gb|EEF41447.1| threonyl-tRNA synthetase, putative [Ricinus communis]
          Length = 691

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 236/617 (38%), Positives = 367/617 (59%), Gaps = 24/617 (3%)

Query: 5   IKLTFPDGSIKNFPVH-ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEII 62
           IK++ P+G++K      ++  D+A+ IS+SLA  A+   ++G + D++ P+     ++I 
Sbjct: 80  IKISLPNGTVKEGKRWISSPMDIAKEISKSLAANALIAQVDGVLWDMNRPLETNCELKIF 139

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE--DGFYYD-FDKEQPFSSDEL 119
           T +         HS AHI+ ++++  +   ++ IGP     +GFYYD F  E   + +  
Sbjct: 140 TFDSDEGRDTFWHSSAHILGQSLEMEYG-CKLCIGPCTTRGEGFYYDAFYGELGLNEEHF 198

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IE    + +A   PF +  +S E+A E+F      +KVEI+  +PA + +T+YR G  
Sbjct: 199 KKIEAGALKAVAEKQPFERIEVSREEALEIFSENN--FKVEIINDLPADKTITVYRCGPL 256

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPH+ +T  VK F   +K + AYWRG+ +R  L R+YG ++  Q+ L +Y+  LE
Sbjct: 257 VDLCRGPHIPNTSFVKAF-ACLKASSAYWRGNKDRESLQRVYGISYPDQKRLKEYIQQLE 315

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E++K DHR L  + +LF   +   G  F+   G +I+  L+ ++R + ++  YEE+ +P 
Sbjct: 316 EAKKYDHRLLGTKQELFFCHQLSPGSWFFLPHGTRIYNKLMDFIRVQYRERGYEEVKSPN 375

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           + +  LW+ SGH  +Y+ NMF ++       + + F LKPMNCPGH  +F H ++SYREL
Sbjct: 376 IYNMKLWETSGHAANYKENMFLLEI------EKQEFGLKPMNCPGHCVIFQHRVRSYREL 429

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLA+FG ++RNE SG+L GL RVR F QDDAH+FC + Q+ +E   + N I   YK F
Sbjct: 430 PLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRETQIKDEVTGVLNFIDYAYKIF 489

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF    +KLSTRPEK +G  A W+ AE+ +K  LD      Q  IN     G+GAFYGPK
Sbjct: 490 GF-TYDLKLSTRPEKYLGDLATWEKAESSLKSALDDFGKPWQ--INE----GDGAFYGPK 542

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFY-VNSHSEKCHPVMIHRAVFGSIERFIGI 537
            +  + DA+ R +QC T+Q+DF LP RF   Y     +++  PVMIHRA+ GS+ER   I
Sbjct: 543 IDISVSDALNRKFQCATLQLDFQLPDRFELEYSAEDEAKRERPVMIHRAILGSVERMFAI 602

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           ++E++KG  P WLSP QAIV  ++  + EYA ++ + +      I+ D  +  I  K+RE
Sbjct: 603 LLEHYKGKWPFWLSPRQAIVCPVSEKSQEYAVQVQDQIHKAGYYIDVDLTDRKIQKKVRE 662

Query: 598 HSIKKIPIIIICGDKEA 614
             + +   I++ G++EA
Sbjct: 663 AQLAQYNYILVVGEEEA 679


>gi|170016922|ref|YP_001727841.1| threonyl-tRNA synthetase [Leuconostoc citreum KM20]
 gi|238688955|sp|B1MXZ5|SYT_LEUCK RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|169803779|gb|ACA82397.1| Threonyl-tRNA synthetase [Leuconostoc citreum KM20]
          Length = 653

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 233/647 (36%), Positives = 376/647 (58%), Gaps = 26/647 (4%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
           S+I LTFPDG++K FP   T   VAESIS+SLAKK+V+  ++G    + D +   G  ++
Sbjct: 2   SEISLTFPDGAVKVFPEGTTPLPVAESISKSLAKKSVSAKLHGAYVGMHDMIPASGDFQL 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSI--WPEVQVAIGPIIEDGFYYDFDKE--QPFSSD 117
           IT  D  +++++RH+ +H++A+A++ I  +  +   +GP I++GFYYD D       S +
Sbjct: 62  ITTSDDEAISLLRHAASHLLAQALKRIPKFANMHFGVGPFIDNGFYYDTDNGAGNQVSVE 121

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +  +IE  M +I+  D P + + ++ E+A  +F   ++ YK+ ++  +P  E +T+  QG
Sbjct: 122 DFPEIEAMMHKIVKEDLPIVSREITREEALSMF--AEDPYKIALISDLPEDEKITIAVQG 179

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           +  +L +G  V STG +K F KL  VAGAYWRG S+ PM+ RIYG A   Q ++   +  
Sbjct: 180 DHIELDKGGLVPSTGWIKHF-KLTSVAGAYWRGKSSNPMMQRIYGVAEWKQADVDAEIQR 238

Query: 238 LEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEIN 295
            EE+++RDHR + R+MDLF  +++ GSG+  W   G  I + +  Y+  +++ + Y+ + 
Sbjct: 239 REEAKERDHRTIGRDMDLFFTSQEVGSGLPVWLPNGATIRRQVERYIIDKELANGYQHVY 298

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP + + +L++ SGHWD YR +MF        + +     L+PMNCP H+ VFNH  +SY
Sbjct: 299 TPVLSNLNLYKTSGHWDHYREDMFPPM----DMGEGEFLELRPMNCPSHIMVFNHKPRSY 354

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP+R+AE G ++R E SG+L GL RVR  T +D H F   E++  E   I  +++ +Y
Sbjct: 355 RELPIRIAELGMMHRYEKSGALTGLSRVREMTLNDGHTFVEPEKLEEEFKSILTMMMGVY 414

Query: 416 KDFGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
           +DF       +LS R     EK    D +W+ ++  +K  +D +K      ++     GE
Sbjct: 415 RDFNITDYRFRLSYRDPENTEKYFDDDDMWEKSQAQLKRAMDDLK------LDYYEAEGE 468

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH-PVMIHRAVFGS 530
            AFYGPK +   K A+G +    TIQ+DF LP RFN  Y+ +  +  H PVM+HR + G+
Sbjct: 469 AAFYGPKLDVQTKTALGSEETMSTIQLDFLLPERFNLTYIGADGQDNHRPVMLHRGIVGT 528

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNE 589
           +ERF   +IE +KG  P WLSP+Q  +  +   A  +YA +I   L++  L    + ++ 
Sbjct: 529 MERFTAYLIEMYKGAFPTWLSPLQVQIIPVNLGAHGDYANDIQAQLQAAGLRAHVETKDA 588

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
            + Y IRE    KIP  ++ GD E   +++ +R++G   T+ +   D
Sbjct: 589 KMGYLIREAQTNKIPYTLVLGDSEVDGQTVTVRKYGEEKTRTMRFAD 635


>gi|224090286|ref|XP_002193839.1| PREDICTED: threonyl-tRNA synthetase [Taeniopygia guttata]
          Length = 711

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 254/646 (39%), Positives = 366/646 (56%), Gaps = 25/646 (3%)

Query: 5   IKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEII 62
           IK+T PDG  +       T   +A  IS+ LA   V   +N  V DL  P+ E  S+E++
Sbjct: 71  IKVTLPDGKQVDAESWKTTPYQIACGISQGLADNTVIAKVNKVVWDLDRPLEEDCSLELL 130

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQ 121
             ED  + AV  HS AHIM EA++ I+    +  GP IE+GFYYD F +E   SS++ + 
Sbjct: 131 KFEDEEAQAVYWHSSAHIMGEAMERIYGGC-LCYGPPIENGFYYDMFLEEGGVSSNDFSA 189

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +E   ++I+     F +  +  E   E+F+  K  +K  IL         T+YR G   D
Sbjct: 190 LETLCKKIMKEKQAFERLEVKKETLLEMFKYNK--FKCRILNEKVNTPTTTVYRCGPLID 247

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHVR TG++K   K+ K +  YW G ++   L RIYG ++   + L ++  F EE+
Sbjct: 248 LCRGPHVRHTGKIKTI-KIHKNSSTYWEGKADMESLQRIYGISFPDTKMLKEWEKFQEEA 306

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVL 300
           + RDHRK+ R+ +LF   E   G  F+  KG  I+ TLI ++R +  K  ++E+ TP V 
Sbjct: 307 KSRDHRKIGRDQELFFFHELSPGSCFFLPKGAYIYNTLIEFIRSEYRKRGFQEVVTPNVF 366

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  LW  SGHW  Y  NMF+ +   +       FALKPMNCPGH  +F+H  +S+RELP+
Sbjct: 367 NSKLWMTSGHWQHYSDNMFSFEVEKEI------FALKPMNCPGHCLMFDHRPRSWRELPL 420

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLA+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+  E       + ++Y  FGF
Sbjct: 421 RLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEEEIKSCLGFLRTVYDVFGF 480

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
               + LSTRPEK +G   +W+ AE  ++  L+      +  +N     G+GAFYGPK +
Sbjct: 481 -SFKLNLSTRPEKYLGDIEVWNQAEKQLENSLNAFGEKWE--LNP----GDGAFYGPKID 533

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH--SEKCHPVMIHRAVFGSIERFIGIM 538
             +KDAIGR  QC TIQ+DF LP RFN  +V SH  ++K  PV+IHRA+ GS+ER I I+
Sbjct: 534 IQIKDAIGRYHQCATIQLDFQLPVRFNLTFV-SHDGNDKTRPVIIHRAILGSVERMIAIL 592

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIRE 597
            EN+ G  PLWLSP Q +V  +  +  EYAQ++           + D     T+N KIR 
Sbjct: 593 TENYGGKWPLWLSPQQVMVVPVGPACDEYAQKVRQHFHDAGFMADVDVDPGCTLNKKIRN 652

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             I +   I++ G+KE +  ++ IR   +    + ++ D +  L +
Sbjct: 653 AQIAQYNFILVVGEKEKASGTVNIRTRDNKVHGERTIADTVERLLQ 698


>gi|254569696|ref|XP_002491958.1| Threonyl-tRNA synthetase, essential cytoplasmic protein [Pichia
           pastoris GS115]
 gi|238031755|emb|CAY69678.1| Threonyl-tRNA synthetase, essential cytoplasmic protein [Pichia
           pastoris GS115]
 gi|328351547|emb|CCA37946.1| threonyl-tRNA synthetase [Pichia pastoris CBS 7435]
          Length = 712

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 246/654 (37%), Positives = 370/654 (56%), Gaps = 30/654 (4%)

Query: 3   SDIKLTFPDGSIKNFPVHATGS-DVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IE 60
           S IK+T  DG++K      T   ++A+SI +S  ++ V   +NG++ DL  P+   S +E
Sbjct: 65  SPIKITLKDGTVKEGVAWETSPFEIAKSIGKSFLERQVISKVNGELWDLERPLEADSQLE 124

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF---DKEQPFSSD 117
               E P    V  HS AH++ EA +  +    + IGP  EDGF+Y+    + E   +  
Sbjct: 125 FFDFETPEGKRVFWHSSAHVLGEACECHYG-AHLCIGPPTEDGFFYEMSIDNGESFVTQA 183

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQ 176
           +   IE   +  I     F +  LS E   ++F   K  YKV I+ E IP     T+YR 
Sbjct: 184 DFPSIEAVAKSAIKEKQKFERLVLSKEDLLKMFAYNK--YKVRIISEKIPDGTASTVYRC 241

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           G   DLC GPH+  TG++K   K++K + +Y+ GD+N   L R+YG ++  ++++ ++L 
Sbjct: 242 GPLIDLCVGPHIPHTGRIKAI-KVLKNSSSYFFGDANNDSLQRVYGISFPDKKQMDEHLK 300

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEIN 295
           FL+E+ +RDHR++ RE +LF+  E   G  FW   G +I+ TL   +R +  K  YEE+ 
Sbjct: 301 FLKEAAERDHRRIGREQELFYFNEMSPGSCFWLPHGTRIYNTLTDLLRTEYRKRGYEEVI 360

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP + +  LW+ SGHW +Y+ NMF  +   +T      F LKPMNCPGH  +F    +SY
Sbjct: 361 TPNMYNSKLWETSGHWANYKENMFTFEVEKET------FGLKPMNCPGHCLMFKSRERSY 414

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP R+A+FG ++RNE SG+L GL RVR F QDDAH+FCT++Q+ +E   I + +  IY
Sbjct: 415 RELPWRVADFGVIHRNEFSGALSGLTRVRRFQQDDAHIFCTQDQIEDEISNIFDFLKFIY 474

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
             FGFE   ++LSTRPEK VG    W++AE  ++  L+  K   +  +N     G+GAFY
Sbjct: 475 GLFGFE-FKMELSTRPEKFVGDIETWNNAEAKLENALN--KWGGKWEVNP----GDGAFY 527

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFY--VNSHSEKCHPVMIHRAVFGSIER 533
           GPK + ++ DA+ R  QC T+Q+DF LP RF   Y   +   +   PVMIHRA+ GS+ER
Sbjct: 528 GPKIDIMISDALKRWHQCATVQLDFQLPQRFELEYRTKDGQDDLTRPVMIHRAILGSVER 587

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
              I+ E+F G  P WLSP Q ++  +     +YAQ++   LK   L  + D    T+  
Sbjct: 588 MTAILTEHFAGKWPFWLSPRQVLIVPVGVKYFDYAQQVQQELKGLDLYADVDLSGNTLQK 647

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFG----STTTQKVSLLDAIPILTK 643
           KIR   +++   I I G++E +++S+ +R           + V L+D IP L +
Sbjct: 648 KIRTGQLQRYNFIFIVGEQEQNDKSVNVRNRDIQELQNKNEAVPLVDVIPKLLQ 701


>gi|325000692|ref|ZP_08121804.1| threonyl-tRNA synthetase [Pseudonocardia sp. P1]
          Length = 682

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 230/596 (38%), Positives = 345/596 (57%), Gaps = 37/596 (6%)

Query: 71  AVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEII 130
           +VIRHS AH++A+AVQ ++P+ ++ IGP + DGFYYDFD + PF+ ++L +IE  M++I+
Sbjct: 73  SVIRHSAAHVLAQAVQQLFPKARLGIGPPVTDGFYYDFDVDTPFTPEDLKKIESAMKKIV 132

Query: 131 ARDSPF-LKQYLSHEKARELFESKKEAYKVEILE----------SIPAKENVTLY----- 174
                F  +++   ++AR   E   E YK+E+++           + +   +T+Y     
Sbjct: 133 KAGQKFSRRRFADRDEARA--ELADEPYKLELVDLKGSDDSEVMEVDSSGELTVYDNVHA 190

Query: 175 RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELT 232
             G+  W DLCRGPH+ +T  V  F  L + A AYWRGD     L RIYGTAW +Q+   
Sbjct: 191 HTGDVVWSDLCRGPHLPTTKFVPAF-TLTRSAAAYWRGDQRNAQLQRIYGTAWESQEAQD 249

Query: 233 QYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDD 290
            YL  + E+E+RDHR+L  E+DLF   ++ GSG+  +H KG  + + L    R R     
Sbjct: 250 AYLERVAEAERRDHRRLGSELDLFSFPDEIGSGLPVFHPKGGVVRKELEDLSRERHAAAG 309

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD---DTIKDLR----TFALKPMNCPG 343
           YE + TP      L++ SGH D Y   M+     D   D    L+     + LKPMNCP 
Sbjct: 310 YEFVYTPHATKGQLFELSGHLDWYADGMYPPMQLDAEYDAEGQLKRPAVDYYLKPMNCPM 369

Query: 344 HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE 403
           H  +F    +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDDAH++CT++QM +E
Sbjct: 370 HNLIFASRGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYCTRDQMQDE 429

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTR-PEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
              +   ++ + +D+G +   ++LSTR PEK +GSD LW++A + ++          +D 
Sbjct: 430 IRSLLQFVLDLLRDYGLDDFYLELSTRNPEKSIGSDELWEEATDALREAAGNFGLELRDD 489

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
                  G  AFY PK     +DAIGR WQ  TIQVD  LP RF   Y      +  PVM
Sbjct: 490 P------GGAAFYAPKISVQARDAIGRYWQMSTIQVDLMLPDRFELEYTAGDGSRQRPVM 543

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSI 582
           IHRA+FGSIERF G++ E++ G  P WL+P+Q +   +T +  +Y +EIA  L++  + I
Sbjct: 544 IHRALFGSIERFFGVLTEHYAGAFPAWLAPVQVVGIPVTDTQEDYVREIAARLRAEGIRI 603

Query: 583 ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           + D  ++ +  KIR H+++K+P +++ G ++    ++  R    + T  V + DA+
Sbjct: 604 DVDAGDDRMQKKIRTHTLQKVPFLLLAGGRDVEAGAVSFRFRDGSQTNGVPVDDAV 659


>gi|227504970|ref|ZP_03935019.1| threonyl-tRNA synthetase [Corynebacterium striatum ATCC 6940]
 gi|227198420|gb|EEI78468.1| threonyl-tRNA synthetase [Corynebacterium striatum ATCC 6940]
          Length = 687

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 237/638 (37%), Positives = 363/638 (56%), Gaps = 46/638 (7%)

Query: 39  VAVAINGKVCDLS-DPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIG 97
           V    +G + DLS  P  +     +   +    AVIRHS AH+MA+AVQ+ +P  ++ IG
Sbjct: 42  VVRGTDGVLYDLSHTPAVDAEFTPVAASEEDGRAVIRHSTAHVMAQAVQAEFPGTKLGIG 101

Query: 98  PIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAY 157
           P IE+GFY+DF  ++PF+ + L  IEK+M++II     F ++  S            E +
Sbjct: 102 PAIENGFYFDFQTDEPFTPEALKAIEKRMKKIIKTGQRFERRVYS-SNEEAEAALADEPF 160

Query: 158 KVEILE--------SIPAKE----NVTLY-----RQGE--WFDLCRGPHVRSTGQVKKFF 198
           K+E+++        S  A E    ++T Y     R GE  WFDLCRGPH+ +T  +  F 
Sbjct: 161 KLELIQDKGNVDPDSDEAAEVGAGDLTHYDNINPRTGEVEWFDLCRGPHLPTTKYIPAF- 219

Query: 199 KLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI 258
            L + + AYWRGD ++  L RIYGTA+ +++ L  Y + + E+EKRDHR+L +E+DLF  
Sbjct: 220 TLTRSSAAYWRGDQSKAGLQRIYGTAFESKEALEAYQHMIAEAEKRDHRRLGQELDLFSF 279

Query: 259 AED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
            ++ GSG   +H  G  +   +  + RR+ I+D Y  ++TP +    L+++SGH D Y  
Sbjct: 280 PDEIGSGFPVFHPNGAVVRMEMEEHSRRRHIQDGYSFVSTPHLTKGDLFKKSGHLDFYAD 339

Query: 317 NMFAVKCAD-------DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVY 369
            MF     D       +  K  + +  KPMNCP H  +F    +SYRELP+RL EFG+VY
Sbjct: 340 GMFPPMQLDGEYDEDGNCTKQPQDYYAKPMNCPMHNLIFASRGRSYRELPLRLFEFGTVY 399

Query: 370 RNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
           R E SG +HGL R RGFTQDD+H++CT EQ+ +E  K+ + IIS+ KD+G +   ++LST
Sbjct: 400 RYEKSGVIHGLTRARGFTQDDSHIYCTPEQLEDELTKVLDFIISLLKDYGLDDFYLELST 459

Query: 430 R-PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL----GEGAFYGPKFEYILK 484
           + P K VGSD +W+ + +I++ V +           +G+ L       AFYGPK     +
Sbjct: 460 KDPNKYVGSDEIWERSTSILQSVAE----------KSGLELVPDPAGAAFYGPKISVQAR 509

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           DAIGR WQ  T+Q+DFNLP RF   Y  S   K  P+MIHRA+FGSIERF G+++E++ G
Sbjct: 510 DAIGRTWQMSTVQLDFNLPERFELEYTASDGTKQRPIMIHRALFGSIERFFGVLLEHYAG 569

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P WL+P Q +   +      + + IA  L+   +  + D  ++ +  KIR H+  K+P
Sbjct: 570 AFPAWLAPHQVVGIPVADEFSPHLEAIAAKLRKRGIRADVDTSDDRMQKKIRNHTTGKVP 629

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +++ G+++    ++  R    +    V + +AI ++ 
Sbjct: 630 FMLLAGERDVDANAVSFRFLDGSQVNGVPVDEAIELIA 667


>gi|301066747|ref|YP_003788770.1| threonyl-tRNA synthetase [Lactobacillus casei str. Zhang]
 gi|300439154|gb|ADK18920.1| Threonyl-tRNA synthetase [Lactobacillus casei str. Zhang]
          Length = 657

 Score =  437 bits (1124), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 236/636 (37%), Positives = 372/636 (58%), Gaps = 24/636 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           + +TFPDG++K FP   T   + E IS SLAKKAVA  ++G +    +P+   G ++I+T
Sbjct: 3   LDITFPDGNVKQFPDGTTVKAITEGISNSLAKKAVAGKLDGDLIAYDEPIAHSGQLQIMT 62

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
            +D   L V+R + A ++A A++ ++P++    G   EDGFYYD D+ +   S D+L  +
Sbjct: 63  KDDAEGLTVLRQTAAFVLAAALKDLYPDIHFGQGQATEDGFYYDTDRADGQVSVDDLPAV 122

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           +KKM+ II  ++      LS  +A + F  K + +K +++E+  A + +  Y+ G++ D 
Sbjct: 123 QKKMEAIIKENAALEPVVLSRAEAFQAF--KNDPFKKQLVEA--AGDPIKGYKLGDFVDF 178

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
                + S  +  K  KL+ VAGAYW+G S+ PML RIYGTA+ +++ L       +E+ 
Sbjct: 179 EEKVLLPSL-KDLKHLKLLSVAGAYWQGKSSNPMLQRIYGTAYWSEKGLEDDAKRRQEAA 237

Query: 243 KRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVL 300
           + DHR + R++DLF +  + G+G+ +W   G  I + +  Y+  ++I D YE + TP + 
Sbjct: 238 EHDHRVIGRDLDLFFVDPKVGAGLPYWMPNGATIRRVIERYIIDKEIADGYEHVYTPVLA 297

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  L++ SGHWD YR +MF        + D     L+PMNCP H+ ++NH ++SYRELP+
Sbjct: 298 NLDLYKTSGHWDHYREDMFPPM----DMGDGEMLELRPMNCPSHIQIYNHHIRSYRELPL 353

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G ++R E SG+L GL RVR  T +D H F   +Q+  E  KI  LI+ +Y+DF  
Sbjct: 354 RIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQVQEEFKKILRLIMDVYEDFNI 413

Query: 421 EKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
                +LS R     EK    D +W  +++++KG +D +K      ++     GE AFYG
Sbjct: 414 TDYSFRLSYRDPKNTEKYFDDDEMWTRSQSMLKGAMDDLK------LDYYEAEGEAAFYG 467

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK +   K A+G D    TIQ+DF LP RFN  YV    E+  PVMIHR + G++ERFI 
Sbjct: 468 PKLDIQTKTALGNDETMSTIQLDFMLPERFNLTYVGKDGEEHRPVMIHRGIVGTMERFIA 527

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            + E +KG  P WL+P QA++  + +   ++Y   I   + +  L ++ D RNE + YKI
Sbjct: 528 YLTEIYKGAFPTWLAPTQAVLIPVNNDLHLDYVNRIKKQMLAAGLRVKVDDRNEKMGYKI 587

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
           RE   KKIP  ++ GDKE ++ ++ +RR+G   T++
Sbjct: 588 REAQTKKIPYTVVVGDKELNDAAVSVRRYGDEHTEE 623


>gi|191638692|ref|YP_001987858.1| threonyl-tRNA synthetase [Lactobacillus casei BL23]
 gi|239632065|ref|ZP_04675096.1| ser-tRNA(Thr) hydrolase [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|238693055|sp|B3WF49|SYT_LACCB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|190712994|emb|CAQ67000.1| Threonyl-tRNA synthetase (Threonine--tRNA ligase) (ThrRS)
           [Lactobacillus casei BL23]
 gi|239526530|gb|EEQ65531.1| ser-tRNA(Thr) hydrolase [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|327382733|gb|AEA54209.1| Threonyl-tRNA synthetase [Lactobacillus casei LC2W]
 gi|327385920|gb|AEA57394.1| Threonyl-tRNA synthetase [Lactobacillus casei BD-II]
          Length = 657

 Score =  437 bits (1124), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 236/636 (37%), Positives = 372/636 (58%), Gaps = 24/636 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           + +TFPDG++K FP   T   + E IS SLAKKAVA  ++G +    +P+   G ++I+T
Sbjct: 3   LDITFPDGNVKQFPDGTTVKAITEGISNSLAKKAVAGKLDGDLIAYDEPIAHSGQLQIMT 62

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
            +D   L V+R + A ++A A++ ++P++    G   EDGFYYD D+ +   S D+L  +
Sbjct: 63  KDDAEGLTVLRQTAAFVLAAALKDLYPDIHFGQGQATEDGFYYDTDRADGQVSVDDLPTV 122

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           +KKM+ II  ++      LS  +A + F  K + +K +++E+  A + +  Y+ G++ D 
Sbjct: 123 QKKMEAIIKENAALEPVVLSRAEAFQAF--KNDPFKKQLVEA--AGDPIKGYKLGDFVDF 178

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
                + S  +  K  KL+ VAGAYW+G S+ PML RIYGTA+ +++ L       +E+ 
Sbjct: 179 EEKVLLPSL-KDLKHLKLLSVAGAYWQGKSSNPMLQRIYGTAYWSEKGLEDDAKRRQEAA 237

Query: 243 KRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVL 300
           + DHR + R++DLF +  + G+G+ +W   G  I + +  Y+  ++I D YE + TP + 
Sbjct: 238 EHDHRVIGRDLDLFFVDPKVGAGLPYWMPNGATIRRVIERYIIDKEIADGYEHVYTPVLA 297

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  L++ SGHWD YR +MF        + D     L+PMNCP H+ ++NH ++SYRELP+
Sbjct: 298 NLDLYKTSGHWDHYREDMFPPM----DMGDGEMLELRPMNCPSHIQIYNHHIRSYRELPL 353

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G ++R E SG+L GL RVR  T +D H F   +Q+  E  KI  LI+ +Y+DF  
Sbjct: 354 RIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQVQEEFKKILRLIMDVYEDFNI 413

Query: 421 EKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
                +LS R     EK    D +W  +++++KG +D +K      ++     GE AFYG
Sbjct: 414 TDYSFRLSYRDPKNTEKYFDDDEMWTRSQSMLKGAMDDLK------LDYYEAEGEAAFYG 467

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK +   K A+G D    TIQ+DF LP RFN  YV    E+  PVMIHR + G++ERFI 
Sbjct: 468 PKLDIQTKTALGNDETMSTIQLDFMLPERFNLTYVGKDGEEHRPVMIHRGIVGTMERFIA 527

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            + E +KG  P WL+P QA++  + +   ++Y   I   + +  L ++ D RNE + YKI
Sbjct: 528 YLTEIYKGAFPTWLAPTQAVLIPVNNDLHLDYVNRIKKQMLAAGLRVKVDDRNEKMGYKI 587

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
           RE   KKIP  ++ GDKE ++ ++ +RR+G   T++
Sbjct: 588 REAQTKKIPYTVVVGDKELNDAAVSVRRYGDEHTEE 623


>gi|28378228|ref|NP_785120.1| threonine--tRNA ligase 1 [Lactobacillus plantarum WCFS1]
 gi|38258333|sp|Q88WU9|SYT_LACPL RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|28271063|emb|CAD63968.1| threonine--tRNA ligase 1 [Lactobacillus plantarum WCFS1]
          Length = 654

 Score =  437 bits (1124), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 238/656 (36%), Positives = 376/656 (57%), Gaps = 27/656 (4%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           + I + FPDG+ K F    T   +A+SIS SLAK++VA   N ++ D   P+  +GSIEI
Sbjct: 2   ASINVKFPDGAEKQFDAGVTTEAIAKSISPSLAKRSVAGKFNDQIVDYRQPLTTDGSIEI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE----QPFSSD 117
           I  +    L V+R + A ++A A + ++P +    G    +GF++D D      +  S D
Sbjct: 62  IAADSEDGLNVLRQTAAQVLANAGKQLFPNIHFGSGEGNANGFFFDTDNPDEDGKQVSED 121

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN--VTLYR 175
           +L  I  KM  II +D P  ++ LS  KA  L       Y+ +++    A  N  V +Y+
Sbjct: 122 DLEAISDKMAAIIKQDLPIEREVLS--KADALALVGDNPYQQDLVNERAAANNDQVVVYK 179

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
           QG++ DL  G  + STG+VK  FKL+ VAGAYW+G S+ PML RIYGTA+  Q++L   L
Sbjct: 180 QGDFVDLSDGAQLASTGKVK-VFKLLSVAGAYWQGKSSNPMLQRIYGTAFLKQKDLDADL 238

Query: 236 YFLEESEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEE 293
              +E+ +RDHR +  E+DLF +  + G+G+ +W   G  I + +  Y+  +++ + Y+ 
Sbjct: 239 KRRQEARERDHRVIGNELDLFFVDPKVGNGLPYWMPNGATIRRQIERYIIDKEVANGYQH 298

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           + TP + +  +++QSGHWD YR +MF        + D     L+PMNCP H+ ++NH ++
Sbjct: 299 VYTPVLANLDVYKQSGHWDHYREDMFPPM----DMGDGEQLELRPMNCPSHIQIYNHHIR 354

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYRELP+R+AE G ++R E SG+L GL RVR  T +D H F   +Q+  E  KI +L++ 
Sbjct: 355 SYRELPLRIAELGMMHRYEKSGALTGLSRVREMTLNDGHTFVALDQIEEEFKKILSLMVE 414

Query: 414 IYKDFGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL 469
           +Y+DF       +LS R     EK    DA+W+ ++ ++K  +D +       ++     
Sbjct: 415 VYEDFDISDYRFRLSYRDPENKEKYFDDDAMWERSQKMLKSAMDDMG------LDYFEAE 468

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG 529
           GE AFYGPK +   K A+G +    TIQ+DF LP RF+  YV +  E+  PVMIHR +  
Sbjct: 469 GEAAFYGPKLDVQTKTALGGEETLSTIQLDFLLPERFDLKYVGADGEEHRPVMIHRGLVS 528

Query: 530 SIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRN 588
           ++ERF+  + E +KG  P WL+P Q  +  + + A   YA+ +   L +  + +  D RN
Sbjct: 529 TMERFVAYLTEIYKGAFPTWLAPKQVTIIPVNNGAHGAYAETVRRRLAAEGVRVSIDDRN 588

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           E + YKIRE   KK+P +++ GD+E +  S+ +R++G   T+  ++   I  +T+E
Sbjct: 589 EKMGYKIRESQTKKVPYLLVVGDQEVANGSVSVRKYGEERTESEAVDMFIGAITQE 644


>gi|307128591|ref|YP_003880621.1| uracil phosphoribosyltransferase [Candidatus Sulcia muelleri CARI]
 gi|306483053|gb|ADM89923.1| uracil phosphoribosyltransferase [Candidatus Sulcia muelleri CARI]
          Length = 640

 Score =  437 bits (1124), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 242/631 (38%), Positives = 375/631 (59%), Gaps = 28/631 (4%)

Query: 24  SDVAESISRSLAKKAVAVAINGKVCDL-SDPVREGSIEIITPEDPRSLAVIRHSCAHIMA 82
           SD+ E+    L+KK ++V+ING+  +L ++   +  IE  T E         HS +H++A
Sbjct: 24  SDIIEN---KLSKKIISVSINGEQKELYTNIYNDCEIEFYTWEHEMGKKAFWHSSSHLLA 80

Query: 83  EAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSD-ELAQIEKKMQEIIARDSPFLKQYL 141
           +++   +P+ ++ IGP I +GFYYD D  + F S+ +  +IE  M    ++   +   Y+
Sbjct: 81  QSILDFYPKAKLNIGPAINNGFYYDIDFGKSFFSEKDFYKIEINMLFNASKCFNYELYYI 140

Query: 142 SHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLM 201
           S  +A++ +  K   YK++IL +I  K  VT+ +   + DLCRG H+ +T  +K   K++
Sbjct: 141 SKSEAKKYY--KNNIYKLDILNNI-KKNYVTICKHDNFIDLCRGCHIPNTYFIKAV-KIL 196

Query: 202 KVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAE- 260
            ++G YW+GD N   L+RIY  +  ++++L +Y    +ES+KRDHRK+ ++++LF  +  
Sbjct: 197 NISGVYWKGDKNNKQLTRIYAISSPSKKDLDKYFLKKKESKKRDHRKIGKKLELFTFSNI 256

Query: 261 DGSGVIFWHRKGW---KIFQTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRAN 317
            G G+  W  KG+   K  +  +  + +KI   YE + TP + ++ L+  SGHW+ Y  N
Sbjct: 257 VGQGLPIWLPKGFLLKKKIENFLLNLNQKI--GYEMVTTPHIANKKLYNISGHWEKYYEN 314

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
            F    + +       F LK MNCP H  ++N+   SY++LP R AEFG+VYR E SG L
Sbjct: 315 SFNTFISPNK---EEQFLLKSMNCPHHCEIYNYKKFSYKDLPKRFAEFGTVYRYEKSGEL 371

Query: 378 HGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR--- 434
           HGL RVR FTQDDAH+FCTKEQ+  E   + ++II I++  GF K   ++S R +K+   
Sbjct: 372 HGLTRVRSFTQDDAHIFCTKEQLIEELKSVIDMIIFIFQKLGFSKYKAQISLRDKKKKYK 431

Query: 435 -VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
            +GS   W+ +E       D IK + + +I+T +  GE AFYGPK +++++D +GR+WQ 
Sbjct: 432 YIGSKEHWEKSEK------DLIKATKEKKIDTYIKYGEAAFYGPKLDFMVQDILGRNWQL 485

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI 553
           GT+QVD+NLP RFN FY N+ ++   P+MIHRA  GS+ERFI I+IEN +GN PLWLSPI
Sbjct: 486 GTVQVDYNLPERFNLFYTNNKNKLIRPIMIHRATLGSLERFIAILIENTEGNFPLWLSPI 545

Query: 554 QAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
              +  I      Y+++I NLL    +    D R E+++ KI +  I KIP+I++ GDKE
Sbjct: 546 PIRIIPILEKNFFYSKKILNLLMQLEIQSFIDSRIESLSKKIIDAEIDKIPLILVLGDKE 605

Query: 614 ASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
               S+ IR +       +SL   I  L KE
Sbjct: 606 EKLNSVSIRSYKEKKIIFLSLERFINFLKKE 636


>gi|269956448|ref|YP_003326237.1| threonyl-tRNA synthetase [Xylanimonas cellulosilytica DSM 15894]
 gi|269305129|gb|ACZ30679.1| threonyl-tRNA synthetase [Xylanimonas cellulosilytica DSM 15894]
          Length = 672

 Score =  437 bits (1123), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 240/633 (37%), Positives = 360/633 (56%), Gaps = 38/633 (6%)

Query: 36  KKAVAVAINGKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           K  V   ++G++ DL   +  G+ +E ++  +P  L V+RHS AH++A+AVQ + P+ ++
Sbjct: 35  KDVVVARVDGELWDLDRQIPVGARVEPVSVHEPDGLNVLRHSAAHVLAQAVQQVNPDAKL 94

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            IGP + DGFYYDFD E PF+ ++L  ++K M  II     F ++ ++ E+AR   E   
Sbjct: 95  GIGPPVRDGFYYDFDVETPFTPEDLKALDKAMSRIIREGQTFRRRVVTEEEARA--ELGG 152

Query: 155 EAYKVEIL---------ESIP-AKENVTLY-------RQGE---WFDLCRGPHVRSTGQV 194
           E YK+E++         ES+      +T+Y       R+ E   W DLCRGPHV ST  +
Sbjct: 153 EPYKLELIGIKGGGDAEESVEVGGAELTIYDNVRGAGRESETVVWKDLCRGPHVPSTRLI 212

Query: 195 KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMD 254
            +  +LM+ A AYWRGD     L R+YGTAW ++  L  +L  L E+E+RDHR++  E D
Sbjct: 213 GQGVQLMRSAAAYWRGDQKNAQLQRVYGTAWPSKDALKGHLERLAEAERRDHRRIGVEQD 272

Query: 255 LFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWD 312
           LF   E+ GSG+  +H KG  I + +  Y+R R I++ +  + TP +  + L+  SGH  
Sbjct: 273 LFSFHENVGSGLPLFHPKGGVIKRVMEDYVRQRHIEEGFSYVGTPHISKEDLFYTSGHLP 332

Query: 313 SYRANMF-AVKCADDTIKDLRT--FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVY 369
            Y   MF +++  DD   D     + LK MNCP H  +++   +SYRELP+RL EFGSVY
Sbjct: 333 YYGDTMFPSMEFHDDDHPDAPALKYRLKAMNCPMHNLIYSSRGRSYRELPIRLFEFGSVY 392

Query: 370 RNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
           R E  G + GL RVRG TQDD+H + T+EQ   E   + + ++S+ KDFG     ++LST
Sbjct: 393 RYEKGGVVQGLTRVRGLTQDDSHSYVTQEQAPGEVTHLLDFMLSVLKDFGLNDFYLELST 452

Query: 430 R----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKD 485
           R    P+K VGSD  W  A  I++ V    ++S  + +      G  AFYGPK     KD
Sbjct: 453 RDDSKPDKFVGSDEEWAKATAILEQVG---RDSGLELVPD---PGGAAFYGPKISVQAKD 506

Query: 486 AIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           AIGR WQ GT+Q DFN P+RF   Y      +  PVMIH A FGSIERF+G++IE++ G+
Sbjct: 507 AIGRTWQMGTVQYDFNQPARFGLEYTAPDGTRQQPVMIHSAKFGSIERFMGVLIEHYAGS 566

Query: 546 LPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPI 605
            P WL+P+Q +   +  +   Y +++   L +  +  E D  ++    KIR  S +K+P 
Sbjct: 567 FPAWLAPVQVLAVPVAEAFDGYLKDVVAQLTARGIRAEVDLSDDRFAKKIRNASKEKVPF 626

Query: 606 IIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           ++I G ++A   ++  R         V + +A+
Sbjct: 627 VLIAGGEDADAGAVSFRYRDGRQDNGVPVAEAV 659


>gi|71895375|ref|NP_001026618.1| threonyl-tRNA synthetase, cytoplasmic [Gallus gallus]
 gi|53128235|emb|CAG31282.1| hypothetical protein RCJMB04_4k14 [Gallus gallus]
          Length = 711

 Score =  437 bits (1123), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 251/644 (38%), Positives = 368/644 (57%), Gaps = 25/644 (3%)

Query: 5   IKLTFPDGSIKNFPV-HATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEII 62
           IK+T PDG + +      T   +A  IS+ LA   V   +N  V DL  P+ E  ++E++
Sbjct: 71  IKVTLPDGKLVDAESWKTTPYQIACGISQGLADNTVIAKVNKMVWDLDRPLEEDCTLELL 130

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQ 121
             ED  + AV  HS AHIM EA++ I+    +  GP IE+GFYYD F ++   SS++ + 
Sbjct: 131 KFEDEEAQAVYWHSSAHIMGEAMERIYGGC-LCYGPPIENGFYYDMFLEDGGVSSNDFSA 189

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +E   ++I+    PF +  +  E   E+F+  K  +K  IL         T+YR G   D
Sbjct: 190 LETLCKKIMKEKQPFERLEVKKETLLEMFKYNK--FKCRILNEKVNTPTTTVYRCGPLID 247

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHVR TG++K   K+ K +  YW G ++   L RIYG ++   + L ++  F EE+
Sbjct: 248 LCRGPHVRHTGKIKSI-KIHKNSSTYWEGKADMETLQRIYGISFPDAKMLKEWEKFQEEA 306

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVL 300
           + RDHRK+ R+ +LF   E   G  F+  KG  I+ TLI ++R +  K  ++E+ TP + 
Sbjct: 307 KNRDHRKIGRDQELFFFHELSPGSCFFLPKGAYIYNTLIEFIRSEYRKRGFQEVVTPNIF 366

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  LW  SGHW  Y  NMF+ +   +       FALKPMNCPGH  +F+H  +S+RELP+
Sbjct: 367 NSKLWMTSGHWQHYSENMFSFEVEKEI------FALKPMNCPGHCLMFDHRPRSWRELPL 420

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLA+FG ++RNE SG+L GL RVR F QDDAH+FC+ EQ+  E       + ++Y  FGF
Sbjct: 421 RLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCSVEQIEEEIKSCLQFLRAVYDVFGF 480

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
               + LSTRPEK +G   +W+ AE  ++  L+      +  +N     G+GAFYGPK +
Sbjct: 481 -SFKLNLSTRPEKYLGDIEVWNRAEKQLENSLNDFGEKWE--LNP----GDGAFYGPKID 533

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH--SEKCHPVMIHRAVFGSIERFIGIM 538
             +KDAIGR  QC TIQ+DF L  RFN  +V SH  ++K  PV+IHRA+ GS+ER I I+
Sbjct: 534 IQIKDAIGRYHQCATIQLDFQLSIRFNLTFV-SHDGNDKTRPVIIHRAILGSVERMIAIL 592

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIRE 597
            EN+ G  PLWLSP Q +V  +  +  EYAQ++        L  + D     T+N KIR 
Sbjct: 593 TENYGGKWPLWLSPQQVMVVPVGPTCDEYAQKVRQQFHDAGLMADIDVDPGCTLNKKIRN 652

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
             + +   I++ G+KE +  ++ IR   +    + ++ D +  L
Sbjct: 653 AQLAQYNFILVVGEKEKASGTVNIRTRDNKVHGERTIADTVKRL 696


>gi|258644607|dbj|BAI39857.1| putative threonyl-tRNA synthetase [Oryza sativa Indica Group]
          Length = 749

 Score =  436 bits (1122), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 240/648 (37%), Positives = 373/648 (57%), Gaps = 26/648 (4%)

Query: 5   IKLTFPDGSIKNFPVH-ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIEI-- 61
           I++T PDG++K+     +T  D+A+ IS  LA   +   +NG + D++ P+ EG  E+  
Sbjct: 115 IRITLPDGAVKDGKKWISTPMDIAKEISSGLANSCLIAQVNGTLWDMTRPL-EGDCELKL 173

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE--DGFYYD-FDKEQPFSSDE 118
              +         HS AHI+ E+++  +   ++ IGP     +GFYYD +  +   +   
Sbjct: 174 FKFDSNEGRDTFWHSSAHILGESLERAYG-CKLCIGPCTTRGEGFYYDAYYNDLTLNETH 232

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
              I+ + Q+ +A   PF +  +S  +A E+F   K  +KVEI+  +P  + +T+YR G 
Sbjct: 233 FGIIDAQAQKAVAEKQPFERIEVSRAEALEMFAENK--FKVEIINELPEDKTITVYRCGP 290

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLCRGPH+ +T  VK F   +K + +YWRG ++R  L R+YG ++   + L +Y + L
Sbjct: 291 LVDLCRGPHIPNTSFVKAF-ACLKASSSYWRGKADRESLQRVYGISFPDSKRLKEYKHLL 349

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE++KRDHR L +  DLF   +   G  F+   G  I+  L+ ++R++ +D  Y+E+ +P
Sbjct: 350 EEAKKRDHRLLGQTQDLFFFHQLSPGSCFFLPHGAIIYNKLMDFLRQQYRDRGYQEVLSP 409

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  LW+ SGH  +Y+ NMF  +       + + F LKPMNCPGH  +F H ++SYRE
Sbjct: 410 NIYNMQLWETSGHAANYKENMFVFEI------EKQEFGLKPMNCPGHCLMFEHRVRSYRE 463

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+A+FG ++RNE SG+L GL RVR F QDDAH+FC + Q+ +E   + + I  +Y+ 
Sbjct: 464 LPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCRESQIKDEVKAVLDFINYVYEI 523

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF K  ++LSTRPEK +G    W+ AE  +   L+      Q  IN     G+GAFYGP
Sbjct: 524 FGF-KYELELSTRPEKYLGDIETWNKAEQQLTEALNEFGKPWQ--INE----GDGAFYGP 576

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC-HPVMIHRAVFGSIERFIG 536
           K +  + DA+ R +QC T+Q+DF LP RF   Y      K   PVMIHRA+ GS+ER   
Sbjct: 577 KIDIGVFDALKRKFQCATLQLDFQLPLRFKLTYSAEDEAKLERPVMIHRAILGSVERMFA 636

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           I++E++ G  PLWLSP QAIV +I+S++VEYA+++   +      +  D  + TI  K+R
Sbjct: 637 ILLEHYNGKWPLWLSPRQAIVCSISSNSVEYAKQVRARIHEAGFHVAIDETDRTIQKKVR 696

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           E  + +   I++ G +EA    + +R         VS+ D I    +E
Sbjct: 697 EAQLAQFNYILVVGAQEAETGQVSVRVRDKAELATVSIDDIITRFKEE 744


>gi|126321714|ref|XP_001373481.1| PREDICTED: hypothetical protein [Monodelphis domestica]
          Length = 723

 Score =  436 bits (1122), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 248/625 (39%), Positives = 360/625 (57%), Gaps = 25/625 (4%)

Query: 5   IKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEII 62
           IK+T PDG  +       T   VA  IS+ LA   V   +N  V DL  P+ E  ++E++
Sbjct: 83  IKVTLPDGKQVDAESWKTTPYQVACGISQGLADNTVIAKVNKVVWDLDRPLEEDCTLELL 142

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQP-FSSDELAQ 121
             ED  + AV  HS AHIM EA++ ++    +  GP IE+GFYYD   E    SS++ + 
Sbjct: 143 KFEDEEAQAVYWHSSAHIMGEAMERVYGGC-LCYGPPIENGFYYDMYLENGGVSSNDFSA 201

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +E   ++II     F +  +  E   E+F+  K  +K  IL         T+YR G   D
Sbjct: 202 LETLCKKIIKEKQLFERLEVKKETLLEMFKYNK--FKCRILNEKVNTPTTTVYRCGPLID 259

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHVR TG++K   K+ K +  YW G ++   L R+YG ++   + L ++  F EE+
Sbjct: 260 LCRGPHVRHTGKIKTL-KIHKNSSTYWEGKADMETLQRVYGISFPDPKMLKEWEKFQEEA 318

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVL 300
           + RDHRK+ R+ +L+   E   G  F+  KG  I+ TL+ ++R +  K  ++E+ TP + 
Sbjct: 319 KNRDHRKIGRDQELYFFHELSPGSCFFMPKGAYIYNTLVEFIRNEYRKRGFQEVVTPNIY 378

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  LW  SGHW  Y  NMF+ +   +       FALKPMNCPGH  +F+H  +S+RELP+
Sbjct: 379 NSKLWLTSGHWQHYSENMFSFEVEKEI------FALKPMNCPGHCLMFDHRPRSWRELPL 432

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLA+FG ++RNE SG+L GL RVR F QDDAH+FCT EQ+  E     + + ++Y  FGF
Sbjct: 433 RLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCTMEQIEEEIKNCLDFLRTVYNVFGF 492

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
               + LSTRPEK +G   +W+ AE  ++  L+      +  +N     G+GAFYGPK +
Sbjct: 493 -SFKLNLSTRPEKFLGDVEIWNQAEKQLESSLNEFGEKWE--LNP----GDGAFYGPKID 545

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH--SEKCHPVMIHRAVFGSIERFIGIM 538
             +KDAIGR  QC TIQ+DF LP RFN  YV SH   +K  PV+IHRA+ GS+ER I I+
Sbjct: 546 IQIKDAIGRYHQCATIQLDFQLPIRFNLTYV-SHDGDDKKRPVIIHRAILGSVERMIAIL 604

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIRE 597
            EN+ G  P WLSP Q +V  +  +  EYAQ++     + +L  ++D     T+N KIR 
Sbjct: 605 TENYGGKWPFWLSPRQVMVVPVGPTCDEYAQKVQQQFHNANLMTDSDLDPGCTLNKKIRN 664

Query: 598 HSIKKIPIIIICGDKEASERSIGIR 622
             + +   I++ G+KE +  ++ IR
Sbjct: 665 AQLAQYNFILVVGEKEKTSGTVNIR 689


>gi|115475758|ref|NP_001061475.1| Os08g0295300 [Oryza sativa Japonica Group]
 gi|38175524|dbj|BAD01219.1| putative threonyl-tRNA synthetase [Oryza sativa Japonica Group]
 gi|38175707|dbj|BAD01414.1| putative threonyl-tRNA synthetase [Oryza sativa Japonica Group]
 gi|113623444|dbj|BAF23389.1| Os08g0295300 [Oryza sativa Japonica Group]
 gi|215687347|dbj|BAG91912.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 745

 Score =  436 bits (1122), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 240/648 (37%), Positives = 373/648 (57%), Gaps = 26/648 (4%)

Query: 5   IKLTFPDGSIKNFPVH-ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIEI-- 61
           I++T PDG++K+     +T  D+A+ IS  LA   +   +NG + D++ P+ EG  E+  
Sbjct: 111 IRITLPDGAVKDGKKWISTPMDIAKEISSGLANSCLIAQVNGTLWDMTRPL-EGDCELKL 169

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE--DGFYYD-FDKEQPFSSDE 118
              +         HS AHI+ E+++  +   ++ IGP     +GFYYD +  +   +   
Sbjct: 170 FKFDSNEGRDTFWHSSAHILGESLERAYG-CKLCIGPCTTRGEGFYYDAYYNDLTLNETH 228

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
              I+ + Q+ +A   PF +  +S  +A E+F   K  +KVEI+  +P  + +T+YR G 
Sbjct: 229 FGIIDAQAQKAVAEKQPFERIEVSRAEALEMFAENK--FKVEIINELPEDKTITVYRCGP 286

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLCRGPH+ +T  VK F   +K + +YWRG ++R  L R+YG ++   + L +Y + L
Sbjct: 287 LVDLCRGPHIPNTSFVKAF-ACLKASSSYWRGKADRESLQRVYGISFPDSKRLKEYKHLL 345

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE++KRDHR L +  DLF   +   G  F+   G  I+  L+ ++R++ +D  Y+E+ +P
Sbjct: 346 EEAKKRDHRLLGQTQDLFFFHQLSPGSCFFLPHGAIIYNKLMDFLRQQYRDRGYQEVLSP 405

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  LW+ SGH  +Y+ NMF  +       + + F LKPMNCPGH  +F H ++SYRE
Sbjct: 406 NIYNMQLWETSGHAANYKENMFVFEI------EKQEFGLKPMNCPGHCLMFEHRVRSYRE 459

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+A+FG ++RNE SG+L GL RVR F QDDAH+FC + Q+ +E   + + I  +Y+ 
Sbjct: 460 LPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCRESQIKDEVKAVLDFINYVYEI 519

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF K  ++LSTRPEK +G    W+ AE  +   L+      Q  IN     G+GAFYGP
Sbjct: 520 FGF-KYELELSTRPEKYLGDIETWNKAEQQLTEALNEFGKPWQ--INE----GDGAFYGP 572

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC-HPVMIHRAVFGSIERFIG 536
           K +  + DA+ R +QC T+Q+DF LP RF   Y      K   PVMIHRA+ GS+ER   
Sbjct: 573 KIDIGVFDALKRKFQCATLQLDFQLPLRFKLTYSAEDEAKLERPVMIHRAILGSVERMFA 632

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           I++E++ G  PLWLSP QAIV +I+S++VEYA+++   +      +  D  + TI  K+R
Sbjct: 633 ILLEHYNGKWPLWLSPRQAIVCSISSNSVEYAKQVRARIHEAGFHVAIDETDRTIQKKVR 692

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           E  + +   I++ G +EA    + +R         VS+ D I    +E
Sbjct: 693 EAQLAQFNYILVVGAQEAETGQVSVRVRDKAELATVSIDDIITRFKEE 740


>gi|227833256|ref|YP_002834963.1| Threonyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
 gi|262184240|ref|ZP_06043661.1| threonyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
 gi|254783518|sp|C3PGS1|SYT_CORA7 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|227454272|gb|ACP33025.1| Threonyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
          Length = 687

 Score =  436 bits (1122), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 246/671 (36%), Positives = 372/671 (55%), Gaps = 55/671 (8%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAV--AINGKVCDLS-DPVREGSIEIIT 63
           +T P G+       A G+ + E    +   +AV V    +G + DLS  P  +     + 
Sbjct: 15  ITVPAGT-------AVGAAMREHELPNKGPEAVVVVRGADGTLYDLSHTPDTDAEFTPVA 67

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
             +    AVIRHSC H+MA+AVQ+ +P  ++ IGP IE+GFY+DF   +PF+ ++L  IE
Sbjct: 68  ACEEDGRAVIRHSCGHVMAQAVQAEFPGTKLGIGPAIENGFYFDFQTAKPFTPEDLKAIE 127

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE--------SIPAKE----NV 171
           K+M++II     F ++++             E +K+E+++        S  A E    ++
Sbjct: 128 KRMKKIIKGGQRF-ERHVYASTEEAEAALANEPFKLELVQDKGNVDPDSDEAAEVGAGDL 186

Query: 172 TLY-----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTA 224
           T Y     R GE  WFDLCRGPHV +T  +  F  L + + AYWRGD  +  L RIYGTA
Sbjct: 187 THYDNVNPRTGEVEWFDLCRGPHVPTTKYIPAF-TLTRSSAAYWRGDQTKAGLQRIYGTA 245

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM 283
           + +++ L  Y   +EE+EKRDHR+L  E+DLF   ++ GSG   +H  G  +   +  + 
Sbjct: 246 FESKEALESYKTMVEEAEKRDHRRLGAELDLFSFPDEIGSGFPVFHPNGATVRMEMEEHS 305

Query: 284 RRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADD-------TIKDLRTFA 335
           RR+ I D Y  ++TP +    L+++SGH D Y   MF     D          K  + + 
Sbjct: 306 RRRHIADGYSFVSTPHLTKGDLFKKSGHLDFYADGMFPPMQLDGEWDADGYCTKQPQDYY 365

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC 395
            KPMNCP H  +F    +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDD+H++C
Sbjct: 366 AKPMNCPMHNLIFASRGRSYRELPLRLFEFGTVYRYEKSGVIHGLTRARGFTQDDSHIYC 425

Query: 396 TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR-PEKRVGSDALWDDAENIMKGVLDT 454
           T EQ+  E  K+   IIS+ KD+G +   ++LST+ P K VGSD +W+ +  I++ V + 
Sbjct: 426 TPEQLEEELTKVLEFIISLLKDYGLDDFYLELSTKDPNKYVGSDEIWERSTAILQSVAE- 484

Query: 455 IKNSSQDRINTGVLL----GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFY 510
                     +G+ L       AFYGPK     +DAIGR WQ  T+Q+DFNLP RF   Y
Sbjct: 485 ---------KSGLELVPDPAGAAFYGPKISVQARDAIGRTWQMSTVQLDFNLPERFELEY 535

Query: 511 VNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQE 570
             S   K  P+MIHRA+FGSIERF G+++E++ G  P WL+P Q +   +  +   + ++
Sbjct: 536 TASDGSKQRPIMIHRALFGSIERFFGVLLEHYAGAFPAWLAPHQVVGIPVADTFAPHLEK 595

Query: 571 IANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
           +   L+S  L  + D  ++ +  KIR H+  K+P +++ G+++    ++  R    T   
Sbjct: 596 VCAELRSRGLRADVDTSDDRMQKKIRNHTTGKVPFMLLAGERDVEADAVSFRFLDGTQVN 655

Query: 631 KVSLLDAIPIL 641
            V +  A+ ++
Sbjct: 656 GVPVEAAVNVI 666


>gi|321475248|gb|EFX86211.1| hypothetical protein DAPPUDRAFT_127463 [Daphnia pulex]
          Length = 688

 Score =  436 bits (1122), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 242/629 (38%), Positives = 357/629 (56%), Gaps = 26/629 (4%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGS-DVAESISRSLAKKAVAVAINGKVCDLSDPVREG-S 58
           +PS I++T PDG I       T   D+A  IS  LA+  V   +NGK+ DL  P+ +  +
Sbjct: 45  VPSPIQITLPDGKIVEGNSWRTSPFDIASGISAGLAENTVIAKVNGKLWDLDRPLEDSCT 104

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSD 117
           ++++  +D  +  V  HS AHI+ E+++  +    +  GP IE+GFYYD F ++Q  S+ 
Sbjct: 105 LQLLKFDDEDAQKVFWHSTAHILGESMERCYGGC-LCYGPPIENGFYYDMFIQDQQVSNF 163

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +   +E  M+  I    PF +  +  E   E+F  K   +KV IL         T YR G
Sbjct: 164 DFPVLENVMKAAIKEKQPFERLEMKKEDLLEMF--KYNEFKVRILNEKVDTPTTTAYRCG 221

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
              DLC GPHVR TG++K F ++ K +  YW G ++   L R+YG ++   ++L ++   
Sbjct: 222 PLIDLCLGPHVRHTGKIKAF-QITKNSSTYWEGKADAESLQRVYGISFPDNKQLKEWQRI 280

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
            EE+ KRDHRKL RE +LF   E   G  F+   G  I+ TL+ ++R + K   ++E+ T
Sbjct: 281 QEEAAKRDHRKLGREYELFFFHELSPGACFFTPHGAHIYNTLVEFLRNEYKQRGFQEVIT 340

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P V +  LW  SGHW  Y  NMF+ +   +T      +A+KPMNCPGH  +F+H ++S+R
Sbjct: 341 PNVYNSKLWLTSGHWQHYSENMFSFEVEKET------YAMKPMNCPGHCLLFDHRVRSWR 394

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ELP+RLA+FG ++RNE SG+L GL RVR F QDDAH+FCT  Q+ +E       +  +YK
Sbjct: 395 ELPLRLADFGVLHRNELSGALSGLTRVRRFQQDDAHIFCTMGQIKSEINGALAFLRDVYK 454

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL--GEGAF 474
            FGF    ++LSTRPEK +G    W+ AE  +   L+    +         LL  G+GAF
Sbjct: 455 IFGF-TFQLRLSTRPEKFLGEIETWNHAEKELTESLNEFGET--------WLLNPGDGAF 505

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  + DA+ R  QC TIQ+DF LP RFN  ++N   EK  PV+IHRA+ GS+ER 
Sbjct: 506 YGPKIDITIMDALRRPHQCATIQLDFQLPIRFNLSFINEAGEKEKPVIIHRAILGSVERM 565

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF-RNETINY 593
           I I+ E++ G  P WLSP Q +V  +      YAQ++   + +    I  D    +T+N 
Sbjct: 566 IAILTESYAGKWPFWLSPRQCVVVPVGPVFDGYAQQVREQIAAAGFRITADIDAGDTMNK 625

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIR 622
           KIR   + +   I++ G+KE +  ++ IR
Sbjct: 626 KIRNGQLSQHNFILVVGEKEQTNGTVNIR 654


>gi|222640294|gb|EEE68426.1| hypothetical protein OsJ_26793 [Oryza sativa Japonica Group]
          Length = 701

 Score =  436 bits (1122), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 240/648 (37%), Positives = 373/648 (57%), Gaps = 26/648 (4%)

Query: 5   IKLTFPDGSIKNFPVH-ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIEI-- 61
           I++T PDG++K+     +T  D+A+ IS  LA   +   +NG + D++ P+ EG  E+  
Sbjct: 67  IRITLPDGAVKDGKKWISTPMDIAKEISSGLANSCLIAQVNGTLWDMTRPL-EGDCELKL 125

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE--DGFYYD-FDKEQPFSSDE 118
              +         HS AHI+ E+++  +   ++ IGP     +GFYYD +  +   +   
Sbjct: 126 FKFDSNEGRDTFWHSSAHILGESLERAYG-CKLCIGPCTTRGEGFYYDAYYNDLTLNETH 184

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
              I+ + Q+ +A   PF +  +S  +A E+F   K  +KVEI+  +P  + +T+YR G 
Sbjct: 185 FGIIDAQAQKAVAEKQPFERIEVSRAEALEMFAENK--FKVEIINELPEDKTITVYRCGP 242

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLCRGPH+ +T  VK F   +K + +YWRG ++R  L R+YG ++   + L +Y + L
Sbjct: 243 LVDLCRGPHIPNTSFVKAF-ACLKASSSYWRGKADRESLQRVYGISFPDSKRLKEYKHLL 301

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE++KRDHR L +  DLF   +   G  F+   G  I+  L+ ++R++ +D  Y+E+ +P
Sbjct: 302 EEAKKRDHRLLGQTQDLFFFHQLSPGSCFFLPHGAIIYNKLMDFLRQQYRDRGYQEVLSP 361

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  LW+ SGH  +Y+ NMF  +       + + F LKPMNCPGH  +F H ++SYRE
Sbjct: 362 NIYNMQLWETSGHAANYKENMFVFEI------EKQEFGLKPMNCPGHCLMFEHRVRSYRE 415

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+A+FG ++RNE SG+L GL RVR F QDDAH+FC + Q+ +E   + + I  +Y+ 
Sbjct: 416 LPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCRESQIKDEVKAVLDFINYVYEI 475

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF K  ++LSTRPEK +G    W+ AE  +   L+      Q  IN     G+GAFYGP
Sbjct: 476 FGF-KYELELSTRPEKYLGDIETWNKAEQQLTEALNEFGKPWQ--INE----GDGAFYGP 528

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH-PVMIHRAVFGSIERFIG 536
           K +  + DA+ R +QC T+Q+DF LP RF   Y      K   PVMIHRA+ GS+ER   
Sbjct: 529 KIDIGVFDALKRKFQCATLQLDFQLPLRFKLTYSAEDEAKLERPVMIHRAILGSVERMFA 588

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           I++E++ G  PLWLSP QAIV +I+S++VEYA+++   +      +  D  + TI  K+R
Sbjct: 589 ILLEHYNGKWPLWLSPRQAIVCSISSNSVEYAKQVRARIHEAGFHVAIDETDRTIQKKVR 648

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           E  + +   I++ G +EA    + +R         VS+ D I    +E
Sbjct: 649 EAQLAQFNYILVVGAQEAETGQVSVRVRDKAELATVSIDDIITRFKEE 696


>gi|320102238|ref|YP_004177829.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Isosphaera
           pallida ATCC 43644]
 gi|319749520|gb|ADV61280.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Isosphaera
           pallida ATCC 43644]
          Length = 752

 Score =  436 bits (1122), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 262/728 (35%), Positives = 391/728 (53%), Gaps = 95/728 (13%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDP---VREGSI-- 59
           I++  PDGS++  P   T  D+A  I + LA+ AVA   +G + DL  P   +RE ++  
Sbjct: 2   IQVKLPDGSVREAPEGTTARDIAAGIGKRLAEAAVAAVADGHIIDLDRPLDAIRESTLTS 61

Query: 60  ---------------EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGF 104
                           I+TP+D  +L V+RHS AH+MA A+  ++PEV++A GP    GF
Sbjct: 62  SNGTVAPKTDQPIDLRILTPKDREALDVLRHSTAHVMARAIMRLFPEVRLAFGPTTAQGF 121

Query: 105 YYDFD-KEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVE-IL 162
           YYD     +  S ++   IE +M  I+    PF +  L   +A E  E  K+ +K+E I 
Sbjct: 122 YYDVHIPGRSLSEEDFPAIEAEMSRIVQAGEPFERFTLPVAQAIEFLEGIKQDFKIEHIT 181

Query: 163 ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYG 222
           + +     ++ YRQGE+ DLCRGPH+   G+V  F KL  +AGAYW+G ++ PML R+YG
Sbjct: 182 QELHTHGVLSFYRQGEFVDLCRGPHIPHAGKVGAF-KLTSIAGAYWKGRADGPMLQRVYG 240

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLIS 281
           TA+  +Q+L  +L  +EE++KRDHR++ +++ LF I+   GSG++ W  KG  +   L  
Sbjct: 241 TAFFNRQDLDTHLARIEEAKKRDHRRIGKDLHLFTISPLAGSGLVLWMPKGAMVRTILQQ 300

Query: 282 YMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMF-AVKCADDTIKD--------- 330
           +++ + +K  Y+ + TP +    L++ SGH+  Y  + F  +K   D  K          
Sbjct: 301 FLQDELLKRGYQPVYTPHIGRVELYKTSGHYPYYSDSQFPTLKLLSDPAKRLVEAIESGE 360

Query: 331 ----------LRTFALKPMNC----------------PGHVAVF--NHGL---------- 352
                     L    + P++                 PG  A +   HG+          
Sbjct: 361 AMDDATACRLLSEAGIPPVSVTPGSGSGGARSFTEMSPGERAAYVREHGVAEEYLLKPMN 420

Query: 353 ------------KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
                       +SYR+LPVRLAEFG+VYR E SG L GL RVRGFTQDDAH+FCT EQ+
Sbjct: 421 CPHHIEIYKAQQRSYRDLPVRLAEFGTVYRYEQSGELSGLTRVRGFTQDDAHLFCTPEQV 480

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLS-TRPE--KRVGSDA-LWDDAENIMKGVLDTIK 456
            +E  +   L   + +  G     V+LS + P+  K  G+DA +W  AE  ++ VL+ + 
Sbjct: 481 RSEFAETMRLTQFVLESLGLSDYRVRLSRSDPDDPKFQGADASIWLKAEADIRAVLEDLG 540

Query: 457 NSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE 516
               + I      GE AFYGPK +++++D +GR WQ GT+Q+D+ LP RF   Y+   + 
Sbjct: 541 LPYDEGI------GEAAFYGPKADFLVRDCLGRQWQLGTVQLDYVLPERFGLEYIGPDNA 594

Query: 517 KCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLK 576
              PVMIHRA FGS+ERF+GI+IE+F G  PLWL+P Q  V  I+    EY + + + L+
Sbjct: 595 PHRPVMIHRAPFGSMERFMGILIEHFAGAFPLWLAPEQVRVLPISDKFNEYGRTVLHTLR 654

Query: 577 SHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
              L  E D R E I  KIR+  ++KIP++++ G KEA   ++  R         VSL D
Sbjct: 655 QAGLRAELDQRPEKIGAKIRDAQLEKIPVMLVVGAKEAETGTVSYRDRVDGDRGVVSLAD 714

Query: 637 AIPILTKE 644
           A+  L +E
Sbjct: 715 AVASLRRE 722


>gi|227513539|ref|ZP_03943588.1| threonine--tRNA ligase [Lactobacillus buchneri ATCC 11577]
 gi|227083412|gb|EEI18724.1| threonine--tRNA ligase [Lactobacillus buchneri ATCC 11577]
          Length = 658

 Score =  436 bits (1121), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 234/641 (36%), Positives = 369/641 (57%), Gaps = 22/641 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEI 61
           S +   FPDGS+K F    T  D+A+SIS SL KKAVA  ++G+  + ++P+ +G  +EI
Sbjct: 13  SKLSFEFPDGSVKEFDDGVTAEDIAKSISISLGKKAVAGKVDGQFVNDNEPLHKGGKVEI 72

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELA 120
           +T +    L V+R + A ++  A+ S + +++       +DGF+ D DK E   S D+L 
Sbjct: 73  VTGDSQDGLNVLRETAAQVLKAAIASNFKDIRFGESAADDDGFFVDTDKPETQISVDQLD 132

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            + K MQ+II++D P    +LS + A  L +   + Y+ E++  I     V  +  G++ 
Sbjct: 133 SLTKSMQQIISKDLPIKVMFLSKDDA--LKQVVGDPYQTELINEIADGNQVKFFEIGDFK 190

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
            +  G  + STG+VK  FKL+ VAGAYW+G S+ PML RIY TA+N Q EL + L   +E
Sbjct: 191 SVAEGAVLPSTGKVK-IFKLLSVAGAYWQGKSSNPMLQRIYATAFNKQSELDEDLKKRQE 249

Query: 241 SEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           + +RDHR +  ++DLF +  + G+G+ +W   G  I +T+  Y+  +++ + YE + TP 
Sbjct: 250 AHERDHRVIGNQLDLFFVDPKVGAGLPYWMPNGATIRRTIERYIVDKEVANGYEHVYTPV 309

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           + +  L++QSGHW+ YR +MF        + D     L+PMNCP H+ ++NH ++SYREL
Sbjct: 310 LANLDLYKQSGHWEHYREDMFPPM----DMGDGEELELRPMNCPSHIQIYNHHIRSYREL 365

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  T +D H F   +Q+  E   I  L++ +Y DF
Sbjct: 366 PLRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQIQEEFQNILKLMVEVYHDF 425

Query: 419 GFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
                  +LS R     EK    D +W+ A++++KG +D +     D +      GE AF
Sbjct: 426 DINDYTFRLSYRDPENTEKYFDDDEMWNRAQSMLKGAMDEL---GLDYVEAE---GEAAF 479

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +   K A+G +    TIQ+DF LP RF+  YV    ++  PVMIHR +  ++ERF
Sbjct: 480 YGPKLDVQTKTALGNEETLSTIQLDFMLPERFDLHYVGEDGKQHRPVMIHRGLVSTMERF 539

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINY 593
           +  + E +KG  P WL+P Q  +  ++     +YA++I + L+   +    D R E + Y
Sbjct: 540 VAYLTEIYKGAFPTWLAPHQVKIIPVSQDKHGDYAKQINDQLRRLKIRSSVDTRAEKMGY 599

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
            IR+    KIP  ++ GD+E + +S+ +RR+G   TQ  SL
Sbjct: 600 LIRDAQTHKIPYTLVVGDEEVNGKSVSVRRYGEKETQAESL 640


>gi|303277979|ref|XP_003058283.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226460940|gb|EEH58234.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 725

 Score =  436 bits (1121), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 230/644 (35%), Positives = 377/644 (58%), Gaps = 21/644 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGS-DVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           IK+T PDG++++   + T   D+A SI + LA+ ++   ++GK  D+  P+  + ++++ 
Sbjct: 58  IKVTMPDGAVRDAVKNVTSPWDIAMSIHKKLAQASILAHVDGKDWDMRRPLEGDCALKLF 117

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQ 121
           + +DP    +  HS AH++ EA++  +    + IGP IE+GFYYD +  ++  S  E  Q
Sbjct: 118 SFDDPEGKELYWHSSAHVLGEALELEYG-ADLTIGPSIEEGFYYDCYLGDKTLSDHERTQ 176

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           I+K+M+ II    PF +  +S ++A E+F   K  +KVE++ ++P    ++ YR G   D
Sbjct: 177 IQKRMEGIIKEKQPFQRIEVSRDEALEMFLENK--FKVELITNLPEDATISCYRCGPMVD 234

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+  T  +K    + + + ++WR D  +  L R+Y   + T + + +Y   +EE+
Sbjct: 235 LCRGPHLPDTAWIKAV-TVNQCSRSHWRADVTKDPLVRVYAVTFPTDKLMKEYKLRIEEA 293

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
           +KRDHR L    +LF       G  F+   G  I+  LI++++ K  + +Y E+ TP + 
Sbjct: 294 KKRDHRVLGLHQELFFFDILSPGSCFFLPDGATIYNNLINFIKEKYWEYEYSEVVTPNIY 353

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  LW+ SGH   Y+ NMF+     +       F LKPMNCPGH  +F H  +S+RELP+
Sbjct: 354 NFDLWKTSGHAAHYKENMFSFNVEKEE------FGLKPMNCPGHCVMFGHRKRSFRELPM 407

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLA+FG ++RNE SG+LHGL RVR F QDDAH+FC  +QM +E +     +  +Y+ FG 
Sbjct: 408 RLADFGVLHRNEFSGALHGLTRVRRFQQDDAHIFCRPDQMEHELVNFMKFLDEVYEVFGL 467

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
              M KLSTRPE  +G   +W+ AE+ ++  L+  K+  + ++N G    +GAFYGPK +
Sbjct: 468 TYEM-KLSTRPEGYLGELEVWNQAEDALRNALN--KSGKEWKLNPG----DGAFYGPKID 520

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
             + DA+ R +QC T+Q+DF LP RFN  YV  ++E   P++IHRA+ GS+ER   I+ E
Sbjct: 521 ITVFDALKRRFQCATVQLDFQLPIRFNLSYVTENNEPARPIIIHRAILGSVERMFAILTE 580

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +F G  P WLSP Q ++  I+ ++ EYA E+   L+      + D  +  +  K+RE  +
Sbjct: 581 HFAGKYPYWLSPKQVMLVPISEASREYALEVKKQLRKAGHHAQVDETDRKMQKKVREAQL 640

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +    I++ G+ E + R++ +R   +    +V L + + +L +E
Sbjct: 641 EHWNYILVVGEGEKTNRTVNVRTRDNVVHGEVKLEELMTVLNEE 684


>gi|9955215|pdb|1EVK|A Chain A, Crystal Structure Of A Truncated Form Of Threonyl-Trna
           Synthetase With The Ligand Threonine
 gi|9955216|pdb|1EVK|B Chain B, Crystal Structure Of A Truncated Form Of Threonyl-Trna
           Synthetase With The Ligand Threonine
 gi|9955217|pdb|1EVL|A Chain A, Crystal Structure Of A Truncated Form Of Threonyl-Trna
           Synthetase With A Threonyl Adenylate Analog
 gi|9955218|pdb|1EVL|B Chain B, Crystal Structure Of A Truncated Form Of Threonyl-Trna
           Synthetase With A Threonyl Adenylate Analog
 gi|9955219|pdb|1EVL|C Chain C, Crystal Structure Of A Truncated Form Of Threonyl-Trna
           Synthetase With A Threonyl Adenylate Analog
 gi|9955220|pdb|1EVL|D Chain D, Crystal Structure Of A Truncated Form Of Threonyl-Trna
           Synthetase With A Threonyl Adenylate Analog
 gi|12084202|pdb|1FYF|A Chain A, Crystal Structure Of A Truncated Form Of Threonyl-Trna
           Synthetase Complexed With A Seryl Adenylate Analog
 gi|12084203|pdb|1FYF|B Chain B, Crystal Structure Of A Truncated Form Of Threonyl-Trna
           Synthetase Complexed With A Seryl Adenylate Analog
 gi|20664135|pdb|1KOG|A Chain A, Crystal Structure Of E. Coli Threonyl-Trna Synthetase
           Interacting With The Essential Domain Of Its Mrna
           Operator
 gi|20664136|pdb|1KOG|B Chain B, Crystal Structure Of E. Coli Threonyl-Trna Synthetase
           Interacting With The Essential Domain Of Its Mrna
           Operator
 gi|20664137|pdb|1KOG|C Chain C, Crystal Structure Of E. Coli Threonyl-Trna Synthetase
           Interacting With The Essential Domain Of Its Mrna
           Operator
 gi|20664138|pdb|1KOG|D Chain D, Crystal Structure Of E. Coli Threonyl-Trna Synthetase
           Interacting With The Essential Domain Of Its Mrna
           Operator
 gi|20664139|pdb|1KOG|E Chain E, Crystal Structure Of E. Coli Threonyl-Trna Synthetase
           Interacting With The Essential Domain Of Its Mrna
           Operator
 gi|20664140|pdb|1KOG|F Chain F, Crystal Structure Of E. Coli Threonyl-Trna Synthetase
           Interacting With The Essential Domain Of Its Mrna
           Operator
 gi|20664141|pdb|1KOG|G Chain G, Crystal Structure Of E. Coli Threonyl-Trna Synthetase
           Interacting With The Essential Domain Of Its Mrna
           Operator
 gi|20664142|pdb|1KOG|H Chain H, Crystal Structure Of E. Coli Threonyl-Trna Synthetase
           Interacting With The Essential Domain Of Its Mrna
           Operator
          Length = 401

 Score =  436 bits (1121), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 194/380 (51%), Positives = 270/380 (71%), Gaps = 13/380 (3%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRK+ +++DL+H+ E+  G++FWH  GW IF+ L  ++R K+K+  Y+E+  P ++D+
Sbjct: 1   RDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDR 60

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+++GHWD+Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+
Sbjct: 61  VLWEKTGHWDNYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRM 114

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+ +E      L+  +Y  FGFEK
Sbjct: 115 AEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEK 174

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+VKLSTRPEKR+GSD +WD AE  +   L+      ++ I     LGEGAFYGPK E+ 
Sbjct: 175 IVVKLSTRPEKRIGSDEMWDRAEADLAVALE------ENNIPFEYQLGEGAFYGPKIEFT 228

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D + R WQCGT+Q+DF+LPSR +A YV   +E+  PVMIHRA+ GS+ERFIGI+ E F
Sbjct: 229 LYDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEF 288

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P+Q ++  IT S  EY  E+   L +  + ++ D RNE I +KIREH++++
Sbjct: 289 AGFFPTWLAPVQVVIMNITDSQSEYVNELTQKLSNAGIRVKADLRNEKIGFKIREHTLRR 348

Query: 603 IPIIIICGDKEASERSIGIR 622
           +P +++CGDKE     + +R
Sbjct: 349 VPYMLVCGDKEVESGKVAVR 368


>gi|227510530|ref|ZP_03940579.1| threonine--tRNA ligase [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
 gi|227190182|gb|EEI70249.1| threonine--tRNA ligase [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
          Length = 658

 Score =  436 bits (1121), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 234/641 (36%), Positives = 369/641 (57%), Gaps = 22/641 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEI 61
           S +   FPDGS+K F    T  D+A+SIS SL KKAVA  ++G+  + ++P+ +G  +EI
Sbjct: 13  SKLSFEFPDGSVKEFDDGVTAEDIAKSISISLGKKAVAGKVDGQFVNDNEPLHKGGKVEI 72

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELA 120
           +T +    L V+R + A ++  A+ S + +++       +DGF+ D DK E   S D+L 
Sbjct: 73  VTGDSQDGLNVLRETAAQVLKAAIASNFKDIRFGESAADDDGFFVDTDKPETQISVDQLD 132

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            + K MQ+II++D P    +LS + A  L +   + Y+ E++  I     V  +  G++ 
Sbjct: 133 SLTKSMQQIISKDLPIKVTFLSKDDA--LKQVVGDPYQTELINEIADGNQVKFFEIGDFK 190

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
            +  G  + STG+VK  FKL+ VAGAYW+G S+ PML RIY TA+N Q EL + L   +E
Sbjct: 191 SVAEGAVLPSTGKVK-IFKLLSVAGAYWQGKSSNPMLQRIYATAFNKQSELDEDLKKRQE 249

Query: 241 SEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           + +RDHR +  ++DLF +  + G+G+ +W   G  I +T+  Y+  +++ + YE + TP 
Sbjct: 250 AHERDHRVIGNQLDLFFVDPKVGAGLPYWMPNGATIRRTIERYIVDKEVANGYEHVYTPV 309

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           + +  L++QSGHW+ YR +MF        + D     L+PMNCP H+ ++NH ++SYREL
Sbjct: 310 LANLDLYKQSGHWEHYREDMFPPM----DMGDGEELELRPMNCPSHIQIYNHHIRSYREL 365

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  T +D H F   +Q+  E   I  L++ +Y DF
Sbjct: 366 PLRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQIQEEFQNILKLMVEVYHDF 425

Query: 419 GFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
                  +LS R     EK    D +W+ A++++KG +D +     D +      GE AF
Sbjct: 426 DINDYTFRLSYRDPENTEKYFDDDEMWNRAQSMLKGAMDEL---GLDYVEAE---GEAAF 479

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +   K A+G +    TIQ+DF LP RF+  YV    ++  PVMIHR +  ++ERF
Sbjct: 480 YGPKLDVQTKTALGNEETLSTIQLDFMLPERFDLHYVGEDGKQHRPVMIHRGLVSTMERF 539

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINY 593
           +  + E +KG  P WL+P Q  +  ++     +YA++I + L+   +    D R E + Y
Sbjct: 540 VAYLTEIYKGAFPTWLAPHQVKIIPVSQDKHGDYAKQINDQLRRLKIRSSVDTRAEKMGY 599

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
            IR+    KIP  ++ GD+E + +S+ +RR+G   TQ  SL
Sbjct: 600 LIRDAQTHKIPYTLVVGDEEVNGKSVSVRRYGEKETQAESL 640


>gi|320159528|ref|YP_004172752.1| threonyl-tRNA synthetase [Anaerolinea thermophila UNI-1]
 gi|319993381|dbj|BAJ62152.1| threonyl-tRNA synthetase [Anaerolinea thermophila UNI-1]
          Length = 623

 Score =  436 bits (1121), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 228/598 (38%), Positives = 364/598 (60%), Gaps = 43/598 (7%)

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIAR 132
           +RHSC+HIMA+AV  ++P  + AIGP IEDGFYYDFD  +  + ++L  IEK+M+EII  
Sbjct: 38  VRHSCSHIMAQAVLELFPNAKYAIGPAIEDGFYYDFDLPRTLTPEDLEHIEKRMKEIIKG 97

Query: 133 DSPFLKQYLSHEKARELFESKKEAYKVEILESI----------PAKEN--VTLYRQGEWF 180
           +  F++Q +S E+AR++F  K + YK+E+++ +          P +E   +++Y+  ++ 
Sbjct: 98  NHDFIRQEVSAEEARQIF--KDQPYKLELIDGLEKGEVDEDGNPLEEKPVISIYKHDKFV 155

Query: 181 DLCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           DLCRGPHV +T ++  K  KLM+V+GAYWRGD + PML RIYGTAW T +EL QYL+ LE
Sbjct: 156 DLCRGPHVANTREINPKAVKLMQVSGAYWRGDEHNPMLQRIYGTAWETPEELEQYLWRLE 215

Query: 240 ESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTP 297
           E++KRDHRKL +E+D++   ++ G G+  W  +G  I + +    +  + K  YE + TP
Sbjct: 216 EAKKRDHRKLGKELDIYLFDDEIGPGLPLWTPRGGAIIEEIEKLAKEMEFKYGYERVRTP 275

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +  + L+ +SGH   Y  +M+        ++ +R + +KPMNCP H  +F    +SYRE
Sbjct: 276 HLAKEDLYLRSGHLPYYAESMYPPM----ELEGVRYY-VKPMNCPMHHKIFASKPRSYRE 330

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LPVRLAE+G+ YR E SG L GLMRVR    +D+H++C++EQ   E + + +L +  ++ 
Sbjct: 331 LPVRLAEYGTCYRYEKSGELFGLMRVRSMQMNDSHIYCSEEQFEQEFVGVIHLYLEYFRL 390

Query: 418 FGFEKIMVKLSTR-----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGV----L 468
           FG +  +++LST       +K V +  LW   E++++  LD          N G+    +
Sbjct: 391 FGIQDYLMRLSTHHPRGLGKKYVNNPELWRKTEDMVRKALD----------NNGIPYVEI 440

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
             E AFYGPK +  +K AIGR++   T QVDF  P RF+  ++N   E+  P++IHRA  
Sbjct: 441 ADEAAFYGPKIDVQVKSAIGREFTLATNQVDFAQPERFDLKFINEKGEEERPLIIHRAPL 500

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRN 588
            + ER IG ++E++ G  P+WLSP Q  +  IT +  EYA+++   L++  +    D  +
Sbjct: 501 STHERLIGFLLEHYAGAFPVWLSPEQVRIIPITDAQNEYAKQLERRLRALEVRATADLDS 560

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           + +N KIR+  + KIP +++ G++EA   ++ +R+     TQ+   +D    L +E +
Sbjct: 561 DRMNAKIRKAQLLKIPYMLVVGEREAQAGAVALRK--RDGTQQTLSVDEFVALLQEKI 616


>gi|116495184|ref|YP_806918.1| threonyl-tRNA synthetase [Lactobacillus casei ATCC 334]
 gi|122263399|sp|Q037Z6|SYT_LACC3 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|116105334|gb|ABJ70476.1| Ser-tRNA(Thr) hydrolase [Lactobacillus casei ATCC 334]
          Length = 657

 Score =  436 bits (1121), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 236/636 (37%), Positives = 371/636 (58%), Gaps = 24/636 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           + +TFPDG++K FP   T   + E IS SLAKKAVA  ++G +    +P+   G ++I+T
Sbjct: 3   LDITFPDGNVKQFPDGTTVKAITEGISNSLAKKAVAGKLDGDLIAYDEPIAHSGQLQIMT 62

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
            +D   L V+R + A ++A A++ ++P++    G   EDGFYYD D+ +   S D+L  +
Sbjct: 63  KDDAEGLTVLRQTAAFVLAAALKDLYPDIHFGQGQATEDGFYYDTDRADGQVSVDDLPTV 122

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           +KKM+ II  ++      LS  +A + F  K + +K +++E+  A + +  Y+ G++ D 
Sbjct: 123 QKKMEAIIKENAALEPVVLSRAEAFQAF--KNDPFKKQLVEA--AGDPIKGYKLGDFVDF 178

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
                + S  +  K  KL+ VAGAYW+G S+ PML RIYGTA+ +++ L       +E+ 
Sbjct: 179 EEKVLLPSL-KDLKHLKLLSVAGAYWQGKSSNPMLQRIYGTAYWSEKGLEDDAKRRQEAA 237

Query: 243 KRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVL 300
           + DHR + R++DLF +  + G+G+ +W   G  I + +  Y+  ++I D YE + TP + 
Sbjct: 238 EHDHRVIGRDLDLFFVDPKVGAGLPYWMPNGATIRRVIERYIIDKEIADGYEHVYTPVLA 297

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  L++ SGHWD YR +MF        + D     L+PMNCP H+ ++NH ++SYRELP+
Sbjct: 298 NLDLYKTSGHWDHYREDMFPPM----DMGDGEMLELRPMNCPSHIQIYNHHIRSYRELPL 353

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G ++R E SG+L GL RVR  T +D H F   +Q+  E  KI  LI+ +Y+DF  
Sbjct: 354 RIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQVQEEFKKILRLIMDVYEDFNI 413

Query: 421 EKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
                +LS R     EK    D +W  +++++KG +D +K      ++     GE AFYG
Sbjct: 414 TDYSFRLSYRDPKNTEKYFDDDEMWTRSQSMLKGAMDDLK------LDYYEAEGEAAFYG 467

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK +   K A+G D    TIQ+DF LP RFN  YV    E+  PVMIHR + G++ERFI 
Sbjct: 468 PKLDIQTKTALGNDETMSTIQLDFMLPERFNLTYVGKDGEEHRPVMIHRGIVGTMERFIA 527

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            + E +KG  P WL+P QA++  + +   ++Y   I   +    L ++ D RNE + YKI
Sbjct: 528 YLTEIYKGAFPTWLAPTQAVLIPVNNDLHLDYVNRIKKQMLVAGLRVKVDDRNEKMGYKI 587

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
           RE   KKIP  ++ GDKE ++ ++ +RR+G   T++
Sbjct: 588 REAQTKKIPYTVVVGDKELNDAAVSVRRYGDEHTEE 623


>gi|324505892|gb|ADY42525.1| Threonyl-tRNA synthetase [Ascaris suum]
          Length = 706

 Score =  436 bits (1121), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 244/649 (37%), Positives = 368/649 (56%), Gaps = 24/649 (3%)

Query: 2   PSDIKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           P  IK+T PDG          T  +VAE ISR LA  A+A  +NG+V DL  P   + ++
Sbjct: 60  PEAIKITLPDGKQFDGKSWRTTPFEVAEKISRGLADTAIAAKVNGEVWDLDRPFEGDATL 119

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDE 118
           +++  +D     V  HS AH++ EA +  +    +  GP + +GFYYD  KE +  S D+
Sbjct: 120 QLLKFDDEEGKQVFWHSSAHVLGEAAER-YCGAHLCYGPPLTEGFYYDMFKEGEAISPDD 178

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
             ++E+ ++  +    PF +  +S +   E+F+  K  +K+ I+         T+YR G 
Sbjct: 179 FPKLEEIVKCAVKDRQPFERLEVSKDDLLEMFKYNK--FKLRIINEKVHTPTATVYRCGP 236

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLCRGPHVR TG++K    + K + +YW G ++   L+RIYG ++   ++L ++    
Sbjct: 237 LIDLCRGPHVRHTGKIKAM-AITKTSSSYWEGRADAESLTRIYGISFPDSKQLKEWQRLQ 295

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
           EE+ KRDHRK+ R+ +LF       G  FW+ KG  I+ TL ++MR +  K  + E+ +P
Sbjct: 296 EEAAKRDHRKIGRDQELFFFHPLSPGAAFWYPKGAHIYNTLCNFMRNQYRKRGFTEVISP 355

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  LW+QSGHW  Y   MF ++   +       F LKPMNCPGH  +++H  +++ E
Sbjct: 356 NMFNSKLWEQSGHWQHYSDGMFKIEVEKEL------FGLKPMNCPGHCLMYSHMPRTHNE 409

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R A+FG ++RNE SG+L GL RVR F QDDAH+FC  +Q+ +E     + I  +Y D
Sbjct: 410 LPMRYADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCRPDQINSEIKGCIDFINYVYVD 469

Query: 418 -FGFEKIMVKLSTRPEKR-VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
            FGF    + LSTRPE+  +G  A WD AE  +K  LD   +  +  +N G    +GAFY
Sbjct: 470 VFGF-TFKLNLSTRPEEGFLGDIATWDHAEAELKKALDESGHPWE--LNPG----DGAFY 522

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  ++DA+ R  QC TIQ+DF LP RF+  Y + ++E+  PVM+HRA+ GSIER  
Sbjct: 523 GPKIDVTIQDALKRYHQCATIQLDFQLPQRFDLAYFDENNERKRPVMVHRALLGSIERMT 582

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FRNETINYK 594
            I+ ENF G  P WLSP QA V T+  S   YA+E+   L      +E D   ++T+N +
Sbjct: 583 AILTENFGGKWPFWLSPRQAKVITVHESQRVYAKEVQKKLYEAGFEVEFDEMCSDTLNKQ 642

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           IR   + +   I++ G KEA   ++ +R   +    +V L D I   T+
Sbjct: 643 IRNAQLAQFNFILVVGPKEAQNGTVNVRTRDNAVRGEVKLDDLIEKFTR 691


>gi|227524682|ref|ZP_03954731.1| threonine--tRNA ligase [Lactobacillus hilgardii ATCC 8290]
 gi|227088166|gb|EEI23478.1| threonine--tRNA ligase [Lactobacillus hilgardii ATCC 8290]
          Length = 658

 Score =  436 bits (1121), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 234/641 (36%), Positives = 369/641 (57%), Gaps = 22/641 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEI 61
           S +   FPDGS+K F    T  D+A+SIS SL KKAVA  ++G+  + ++P+ +G  +EI
Sbjct: 13  SKLSFEFPDGSVKEFDDGVTAEDIAKSISISLGKKAVAGKVDGQFVNDNEPLHKGGKVEI 72

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELA 120
           +T +    L V+R + A ++  A+ S + +++       +DGF+ D DK E   S D+L 
Sbjct: 73  VTGDSQDGLNVLRETAAQVLKAAIASNFKDIRFGESAADDDGFFVDTDKPETQISVDQLD 132

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            + K MQ+II++D P    +LS + A  L +   + Y+ E++  I     V  +  G++ 
Sbjct: 133 SLTKSMQQIISKDLPIKVTFLSKDDA--LKQVVGDPYQTELINEIADGNQVKFFEIGDFK 190

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
            +  G  + STG+VK  FKL+ VAGAYW+G S+ PML RIY TA+N Q EL + L   +E
Sbjct: 191 SVAEGAVLPSTGKVK-IFKLLSVAGAYWQGKSSNPMLQRIYATAFNKQSELDEDLKKRQE 249

Query: 241 SEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           + +RDHR +  ++DLF +  + G+G+ +W   G  I +T+  Y+  +++ + YE + TP 
Sbjct: 250 AHERDHRVIGNQLDLFFVDPKVGAGLPYWMPNGATIRRTIERYIVDKEVANGYEHVYTPV 309

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           + +  L++QSGHW+ YR +MF        + D     L+PMNCP H+ ++NH ++SYREL
Sbjct: 310 LANLDLYKQSGHWEHYREDMFPPM----DMGDGEELELRPMNCPSHIQIYNHHIRSYREL 365

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  T +D H F   +Q+  E   I  L++ +Y DF
Sbjct: 366 PLRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQIQEEFQNILKLMVEVYHDF 425

Query: 419 GFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
                  +LS R     EK    D +W+ A++++KG +D +     D +      GE AF
Sbjct: 426 DINDYTFRLSYRDPENTEKYFDDDEMWNRAQSMLKGAMDEL---GLDYVEAE---GEAAF 479

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +   K A+G +    TIQ+DF LP RF+  YV    ++  PVMIHR +  ++ERF
Sbjct: 480 YGPKLDVQTKTALGNEETLSTIQLDFMLPERFDLHYVGEDGKQHRPVMIHRGLVSTMERF 539

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINY 593
           +  + E +KG  P WL+P Q  +  ++     +YA++I + L+   +    D R E + Y
Sbjct: 540 VAYLTEIYKGAFPTWLAPHQVKIIPVSQDKHGDYAKQINDQLRRLKIRSSVDTRAEKMGY 599

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
            IR+    KIP  ++ GD+E + +S+ +RR+G   TQ  SL
Sbjct: 600 LIRDAQTHKIPYTLVVGDEEVNGKSVSVRRYGEKETQAESL 640


>gi|255325106|ref|ZP_05366212.1| threonine--tRNA ligase [Corynebacterium tuberculostearicum SK141]
 gi|255297671|gb|EET76982.1| threonine--tRNA ligase [Corynebacterium tuberculostearicum SK141]
          Length = 687

 Score =  436 bits (1120), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 239/633 (37%), Positives = 366/633 (57%), Gaps = 46/633 (7%)

Query: 44  NGKVCDLS-DPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIED 102
           +G + DLS  P  E +   +   +    AVIRHSC H+MA+AVQ+ +P  ++ IGP IE+
Sbjct: 47  DGTLFDLSHTPDTESTFTPVAASEEDGRAVIRHSCGHVMAQAVQAEFPGTKLGIGPAIEN 106

Query: 103 GFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL 162
           GFY+DF   +PF+ ++L  IEK+M++II     F ++++            +E +K+E++
Sbjct: 107 GFYFDFQTAEPFTPEDLKAIEKRMKKIIKGGQRF-ERHVYESAEEAEKALAEEPFKLELV 165

Query: 163 E--------SIPAKE----NVTLY-----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKV 203
           +        S  A E    ++T Y     R GE  WFDLCRGPHV +T  +  F  L + 
Sbjct: 166 QDKGNVDPDSDEAAEVGSGDLTHYDNINPRTGEVEWFDLCRGPHVPTTKYIPAF-TLTRS 224

Query: 204 AGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-G 262
           + AYWRGD ++  L RIYGTA+ +++ L  Y   +EE+EKRDHR+L +E+DLF   ++ G
Sbjct: 225 SAAYWRGDQSKAGLQRIYGTAFESKEALEAYQTMVEEAEKRDHRRLGQELDLFSFPDEIG 284

Query: 263 SGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG   +H  G  +   + ++ R R ++  Y  +NTP +    L+++SGH D Y   MF  
Sbjct: 285 SGFPVFHPNGATVRMEMENHSRNRHVQAGYSFVNTPHITKGDLFKKSGHLDFYADGMFPP 344

Query: 322 KCAD-------DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
              D       +T+K+ + +  KPMNCP H  +F    +SYRELP+RL EFG+VYR E S
Sbjct: 345 MQLDGEYDEEGNTVKEPQDYYAKPMNCPMHNLIFASRGRSYRELPLRLFEFGTVYRYEKS 404

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR-PEK 433
           G +HGL R RGFTQDDAH++CT+EQ+  E  K+ + IIS+ KD+G     ++LST+ P K
Sbjct: 405 GVVHGLTRARGFTQDDAHIYCTEEQLEEELTKVLDFIISLLKDYGLSDFYLELSTKDPNK 464

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL----GEGAFYGPKFEYILKDAIGR 489
            VGSD +W+ + +I++ V +           +G+ L       AFYGPK     +DAIGR
Sbjct: 465 FVGSDEIWERSTSILQSVAE----------KSGLELVPDPAGAAFYGPKISVQARDAIGR 514

Query: 490 DWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW 549
            WQ  T+Q+DFNLP RF   Y  S   K  P+MIHRA+FGSIERF G+++E++ G  P W
Sbjct: 515 TWQMSTVQLDFNLPERFELEYTASDGTKKRPIMIHRALFGSIERFFGVLLEHYAGAFPAW 574

Query: 550 LSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIIC 609
           L+P Q +   +      + +E+A  L+   +  + D  ++ +  KIR H+  K+P +++ 
Sbjct: 575 LAPHQVVGIPVADEFSPHLEEVATQLRQKGIRADVDTSDDRMQKKIRNHTTGKVPFMLVA 634

Query: 610 GDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           G ++    ++  R    T    V + +A+ ++ 
Sbjct: 635 GARDVEADAVSFRFLDGTQVNGVPVKEAVELIA 667


>gi|119716597|ref|YP_923562.1| threonyl-tRNA synthetase [Nocardioides sp. JS614]
 gi|166225470|sp|A1SJ90|SYT_NOCSJ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|119537258|gb|ABL81875.1| Ser-tRNA(Thr) hydrolase [Nocardioides sp. JS614]
          Length = 668

 Score =  436 bits (1120), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 244/674 (36%), Positives = 373/674 (55%), Gaps = 58/674 (8%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEI 61
           SD+K+       +      TG+   E          +A  +NG + DL+  + +G  +E 
Sbjct: 2   SDLKIALTHADAREERTVTTGTKAWELFQDD--PSVIAARVNGALRDLAHELADGDQVEP 59

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +  + P    ++RHS AH+MA+AVQ ++P+ ++ IGP +E+GFYYDFD + PF+  +L +
Sbjct: 60  VAIDSPDGHDILRHSTAHVMAQAVQQLFPDAKLGIGPPVENGFYYDFDVDTPFNPADLDK 119

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-------------ESIPAK 168
           IE  M++II     F ++  +   A  + E + E YK+E++             E++   
Sbjct: 120 IETAMRKIIKEGQRFSRRVTTDADA--ISELRDEPYKIELIGLKGSGASTGSTTEAVEGA 177

Query: 169 E------NVTLY----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPM 216
                   +T+Y    R G+  W DLCRGPH+ +T ++  F KLM+ A AYWRG+     
Sbjct: 178 SVEVGAGELTIYDNIRRNGDVAWSDLCRGPHLPTTKRIPAF-KLMRTAAAYWRGNEKNKQ 236

Query: 217 LSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKI 275
           L RIYGTAW ++  L ++L+ +EE+E+RDHRKL R++DLF   ++ GSG+  +H KG  I
Sbjct: 237 LQRIYGTAWESKDALEEHLHRIEEAERRDHRKLGRDLDLFSFPDEIGSGLPVFHPKGGVI 296

Query: 276 FQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
            + +  Y+R R +++ +E + TP +  + L+  SGH   Y   MF     D        +
Sbjct: 297 KRVMEDYVRQRHVEEGFEYVGTPHIAKEGLFYTSGHLPYYGEAMFPPLDVDGM-----DY 351

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
            LK MNCP H  +F    +SYRELP+RL EFG VYR+E SG +HGL RVRGF QDD+H +
Sbjct: 352 RLKAMNCPMHNLIFRSRQRSYRELPLRLFEFGHVYRHEKSGVIHGLTRVRGFAQDDSHSY 411

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKG 450
            TKEQ   E   + +  + +++DFG +   ++LSTR    P+K +GSD  W  A  +++ 
Sbjct: 412 VTKEQAPAEIKHLLDFCLGLFRDFGLDDFYLELSTRDDSKPDKFIGSDEDWAVATKVLED 471

Query: 451 VLDTIKNSSQDRINTGVLL----GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPS-- 504
           V           I +G+ L    G  A+YGPK     +DAIGR WQ  TIQ DFN PS  
Sbjct: 472 VC----------IASGLELVPDPGGAAYYGPKVSVQARDAIGRTWQMSTIQYDFNQPSAD 521

Query: 505 RFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA 564
           RF+  Y  +   +  PVMIH A FGSIERFIG+++E++ G  P WL+P+Q     I    
Sbjct: 522 RFDLHYTAADGSRQQPVMIHSAKFGSIERFIGVLVEHYAGAFPPWLAPVQVQAIPIAERH 581

Query: 565 VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRF 624
            +Y  ++A  +++  L +E D  ++ +  KIR   + K+P ++I GD + +  ++  R  
Sbjct: 582 NDYLYDVAKRMQAQGLRVEVDDSDDRMQKKIRNAQLLKVPFMMIAGDDDVAAGAVSFRYR 641

Query: 625 GSTTTQKVSLLDAI 638
                  V L +AI
Sbjct: 642 DGRQDNGVPLDEAI 655


>gi|227534800|ref|ZP_03964849.1| threonyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
 gi|227187556|gb|EEI67623.1| threonyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
          Length = 674

 Score =  436 bits (1120), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 236/636 (37%), Positives = 371/636 (58%), Gaps = 24/636 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           + +TFPDG++K FP   T   + E IS SLAKKAVA  ++G +    +P+   G ++I+T
Sbjct: 20  LDITFPDGNVKQFPDGTTVKAITEGISNSLAKKAVAGKLDGDLIAYDEPIAHSGQLQIMT 79

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
            +D   L V+R + A ++A A++ ++P++    G   EDGFYYD D+ +   S D+L  +
Sbjct: 80  KDDAEGLTVLRQTAAFVLAAALKDLYPDIHFGQGQATEDGFYYDTDRADGQVSVDDLPTV 139

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           +KKM+ II  ++      LS  +A + F  K + +K +++E+  A + +  Y+ G++ D 
Sbjct: 140 QKKMEAIIKENAALEPVVLSRAEAFQAF--KNDPFKKQLVEA--AGDPIKGYKLGDFVDF 195

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
                + S  +  K  KL+ VAGAYW+G S+ PML RIYGTA+ +++ L       +E+ 
Sbjct: 196 EEKVLLPSL-KDLKHLKLLSVAGAYWQGKSSNPMLQRIYGTAYWSEKGLEDDAKRRQEAA 254

Query: 243 KRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVL 300
           + DHR + R++DLF +  + G+G+ +W   G  I + +  Y+  ++I D YE + TP + 
Sbjct: 255 EHDHRVIGRDLDLFFVDPKVGAGLPYWMPNGATIRRVIERYIIDKEIADGYEHVYTPVLA 314

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  L++ SGHWD YR +MF        + D     L+PMNCP H+ ++NH ++SYRELP+
Sbjct: 315 NLDLYKTSGHWDHYREDMFPPM----DMGDGEMLELRPMNCPSHIQIYNHHIRSYRELPL 370

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G ++R E SG+L GL RVR  T +D H F   +Q+  E  KI  LI+ +Y+DF  
Sbjct: 371 RIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQVQEEFKKILRLIMDVYEDFNI 430

Query: 421 EKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
                +LS R     EK    D +W  +++++KG +D +K      ++     GE AFYG
Sbjct: 431 TDYSFRLSYRDPKNTEKYFDDDEMWTRSQSMLKGAMDDLK------LDYYEAEGEAAFYG 484

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK +   K A+G D    TIQ+DF LP RFN  YV    E+  PVMIHR + G++ERFI 
Sbjct: 485 PKLDIQTKTALGNDETMSTIQLDFMLPERFNLTYVGKDGEEHRPVMIHRGIVGTMERFIA 544

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            + E +KG  P WL+P QA++  + +   ++Y   I   +    L ++ D RNE + YKI
Sbjct: 545 YLTEIYKGAFPTWLAPTQAVLIPVNNDLHLDYVNRIKKQMLVAGLRVKVDDRNEKMGYKI 604

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
           RE   KKIP  ++ GDKE ++ ++ +RR+G   T++
Sbjct: 605 REAQTKKIPYTVVVGDKELNDAAVSVRRYGDEHTKE 640


>gi|197294184|ref|YP_001798725.1| threonyl-tRNA synthetase [Candidatus Phytoplasma australiense]
 gi|226701405|sp|B1V8W6|SYT_PHYAS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|171853511|emb|CAM11353.1| Threonyl-tRNA synthetase [Candidatus Phytoplasma australiense]
          Length = 641

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 234/649 (36%), Positives = 382/649 (58%), Gaps = 23/649 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           IK+   +    +FP   T  ++ ++  +   KK VA   N K  +L  P+ ++G +EI+ 
Sbjct: 2   IKINLLNHQSHSFPSKTTPLEIWKNWLKKTLKKPVAALFNQKFIELDYPLTQDGDLEILA 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQI 122
             +P+SL V+ HS AH+MA+A+Q ++P     IGP I++GFYYD D +    S  +L  I
Sbjct: 62  ESNPKSLFVLNHSTAHLMAQAIQRLYPNALFTIGPAIKEGFYYDIDFQNHSISEKDLPTI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EKKM E+   +   + + ++H++A+ LF      YK+ +LE    +E++T+  QGE+ DL
Sbjct: 122 EKKMHEVALENHSMIMKKVTHDEAKRLFSYN--PYKLILLEK-HKEEDITVCHQGEFIDL 178

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRG H+     +K F KL+K++G+Y++GD+    L+RIYGT++  +++L  YL  LEE +
Sbjct: 179 CRGGHIPKLSLIKHF-KLLKISGSYFQGDAKNKSLTRIYGTSFFKKEDLGNYLKLLEERK 237

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVL 300
           +RDH++L +++DLF  +++ G G+ FW  KG  + + +  Y+  +++   Y  + TP + 
Sbjct: 238 ERDHKRLNKKLDLFMFSQEVGLGLPFWLPKGATLRRIVERYIVDKELSHQYHHVYTPIMA 297

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  L++ SGH + Y  NMF V   ++  K      L+PMNCP H+ ++    +SY+ELP+
Sbjct: 298 NVELYRTSGHLEHYSQNMFPVMQLENKEK----IVLRPMNCPHHMMIYKKSPRSYKELPL 353

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G ++R E SG++ GL RVR    +DAH F   +Q+  E  KI NLI+ +Y+DF  
Sbjct: 354 RIAELGMMHRFEKSGAVSGLQRVREMNLNDAHNFVRPDQIEEEIKKIINLILEVYRDFKI 413

Query: 421 EKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
            K   +LS R     EK    D +W  AENI+K  +  +    ++ I      G+ AFYG
Sbjct: 414 TKYEFRLSYRDPQDKEKYFPDDNMWQHAENILKKTIQELNLPFREAI------GDAAFYG 467

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK +  +  A+G +    TIQ+DF LP +F+  +++++++ C PV+IHRA+  ++ERF+ 
Sbjct: 468 PKLDVQVLTALGNEETLSTIQLDFLLPQKFDLTFIDANNKHCRPVVIHRAIVSTLERFLS 527

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            +IE  KG  PLWL+P+Q ++  ++SS  ++Y QEI  LL S  L  E + +  T+ YKI
Sbjct: 528 HLIEENKGVFPLWLAPVQILLIPVSSSVNLKYTQEIKELLLSQGLRAEINSKEATLGYKI 587

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           RE    KIP  I+ GD E ++  I  R++G       ++   I  L +E
Sbjct: 588 REAQELKIPYQIVVGDNEIAKNLITFRKYGQKNQTTTNIETFISSLNQE 636


>gi|311739567|ref|ZP_07713402.1| threonine--tRNA ligase [Corynebacterium pseudogenitalium ATCC
           33035]
 gi|311305383|gb|EFQ81451.1| threonine--tRNA ligase [Corynebacterium pseudogenitalium ATCC
           33035]
          Length = 687

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 239/633 (37%), Positives = 366/633 (57%), Gaps = 46/633 (7%)

Query: 44  NGKVCDLS-DPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIED 102
           +G + DLS  P  E +   +   +    AVIRHSC H+MA+AVQ+ +P  ++ IGP IE+
Sbjct: 47  DGTLFDLSHTPDTESTFTPVAASEEDGRAVIRHSCGHVMAQAVQAEFPGTKLGIGPAIEN 106

Query: 103 GFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL 162
           GFY+DF   +PF+ ++L  IEK+M++II     F ++++            +E +K+E++
Sbjct: 107 GFYFDFQTAEPFTPEDLKAIEKRMKKIIKGGQRF-ERHVYESAEEAEKALAEEPFKLELV 165

Query: 163 E--------SIPAKE----NVTLY-----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKV 203
           +        S  A E    ++T Y     R GE  WFDLCRGPHV +T  +  F  L + 
Sbjct: 166 QDKGNVDPDSDEAAEVGSGDLTHYDNINPRTGEVEWFDLCRGPHVPTTKYIPAF-TLTRS 224

Query: 204 AGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-G 262
           + AYWRGD ++  L RIYGTA+ +++ L  Y   +EE+EKRDHR+L +E+DLF   ++ G
Sbjct: 225 SAAYWRGDQSKAGLQRIYGTAFESKEALEAYQTMVEEAEKRDHRRLGQELDLFSFPDEIG 284

Query: 263 SGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG   +H  G  +   + ++ R R ++  Y  +NTP +    L+++SGH D Y   MF  
Sbjct: 285 SGFPVFHPNGATVRMEMENHSRNRHVQAGYSFVNTPHITKGDLFKKSGHLDFYADGMFPP 344

Query: 322 KCAD-------DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
              D       +T+K+ + +  KPMNCP H  +F    +SYRELP+RL EFG+VYR E S
Sbjct: 345 MQLDGEYDEEGNTVKEPQDYYAKPMNCPMHNLIFASRGRSYRELPLRLFEFGTVYRYEKS 404

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR-PEK 433
           G +HGL R RGFTQDDAH++CT+EQ+  E  K+ + IIS+ KD+G     ++LST+ P K
Sbjct: 405 GVVHGLTRARGFTQDDAHIYCTEEQLEEELTKVLDFIISLLKDYGLSDFYLELSTKDPNK 464

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL----GEGAFYGPKFEYILKDAIGR 489
            VGSD +W+ + +I++ V +           +G+ L       AFYGPK     +DAIGR
Sbjct: 465 FVGSDEIWERSTSILQSVAE----------KSGLELVPDPAGAAFYGPKISVQARDAIGR 514

Query: 490 DWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW 549
            WQ  T+Q+DFNLP RF   Y  S   K  P+MIHRA+FGSIERF G+++E++ G  P W
Sbjct: 515 TWQMSTVQLDFNLPERFELEYTASDGTKKRPIMIHRALFGSIERFFGVLLEHYAGAFPAW 574

Query: 550 LSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIIC 609
           L+P Q +   +      + +E+A  L+   +  + D  ++ +  KIR H+  K+P +++ 
Sbjct: 575 LAPHQVVGIPVADEFSPHLEEVAAQLRQKGIRADVDTSDDRMQKKIRNHTTGKVPFMLVA 634

Query: 610 GDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           G ++    ++  R    T    V + +A+ ++ 
Sbjct: 635 GARDVEADAVSFRFLDGTQVNGVPVKEAVELIA 667


>gi|326431769|gb|EGD77339.1| threonyl-tRNA synthetase isoform 2 [Salpingoeca sp. ATCC 50818]
          Length = 766

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 234/638 (36%), Positives = 369/638 (57%), Gaps = 25/638 (3%)

Query: 5   IKLTFPDGSIKNFPV-HATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEII 62
           IK+T PDG + +      T  DVA+SIS  +A  AV   +N  + D++  + E  +I+ +
Sbjct: 86  IKITLPDGKVVDGESWRTTPYDVAKSISEGMANSAVVAKVNDTLFDMTRELEEDCTIKFL 145

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
             ED     V  HS AHI+ EA++ ++    +  GP I +GF+YD D  E+  +  +L  
Sbjct: 146 FFEDEDGKEVFWHSSAHILGEAME-MYFGGHLCYGPPIANGFFYDMDMGERTVNDADLKA 204

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +EK + + + +  PF +  ++ E    +FE     +K  I++    +   T+YR G   D
Sbjct: 205 VEKVVNKAVKQKQPFQRLVMTKEDLLRMFEHN--PFKQRIIKEKVTEPKTTVYRCGPLID 262

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+R TGQVK F  + K + +YW GD+    L R+Y  ++  + +L ++   +EE+
Sbjct: 263 LCRGPHIRHTGQVKAF-AVTKSSSSYWEGDAGAECLQRVYAISFPKKDQLKEWKKLMEEA 321

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVL 300
            KRDHRK+ RE  LF   +   G  F+  +G +I++TL+ +MR + I   +EE+ TP + 
Sbjct: 322 AKRDHRKIGREQQLFFFDDLSPGSCFFEPRGARIYRTLMEFMREQYITRGFEEVVTPNIF 381

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ LW+ SGHW  Y  N+F+ +  ++T      FA+KPMNCP H  +F+H  +SY+ELP+
Sbjct: 382 NKRLWETSGHWQHYAENIFSFEVENET------FAMKPMNCPSHCVMFSHRNRSYKELPL 435

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+A+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E       + ++Y  FGF
Sbjct: 436 RMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCRPEQIEDEIKGCLAFLNAVYGTFGF 495

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
               + LSTRPEK +G   +W+ AE  +   LD      + ++N     G+GAFYGPK +
Sbjct: 496 -TYELNLSTRPEKFLGDVEVWERAEASLAKALDEF--GHEWKLNP----GDGAFYGPKID 548

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC---HPVMIHRAVFGSIERFIGI 537
             + DA+ R +QC TIQ+DF LP RFN  YV +  E+     PV+IHRA+ GS+ER   I
Sbjct: 549 ITVHDALKRSFQCATIQLDFQLPIRFNLEYVPARKEEGVVYRPVIIHRAILGSVERMFAI 608

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIR 596
           + E++ G  P WLSP QA V  I     +YA+E+     +H  +++ D  +  T+  K+R
Sbjct: 609 LCEHYAGKWPFWLSPRQAQVVPIHPEFNKYAEEVRMFFHTHGFAVDVDADDSLTLQKKVR 668

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
              +++   I++ G+ E  +R++ +R    +   ++SL
Sbjct: 669 RACVEQYNFILVVGEAECKKRTVNVRTRDGSRIGELSL 706


>gi|73951029|ref|XP_857141.1| PREDICTED: similar to threonyl-tRNA synthetase-like 2 isoform 2
           [Canis familiaris]
          Length = 799

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 240/623 (38%), Positives = 361/623 (57%), Gaps = 22/623 (3%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAH 79
            T   VA  IS  LA+  V   +NG++ DL  P+  + ++E++T ++  + AV  HS AH
Sbjct: 176 TTPYQVAAEISPELAESTVVAKVNGELWDLDRPLEGDSTLELLTFDNEEAQAVYWHSSAH 235

Query: 80  IMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQIEKKMQEIIARDSPFLK 138
           I+ EA++ ++    +  GP IE+GFYYD F +++  SS EL+ +E   + II    PF +
Sbjct: 236 ILGEAME-LYYGGHLCYGPPIENGFYYDMFIEDRAVSSTELSALENICKTIIKEKQPFER 294

Query: 139 QYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFF 198
             +S E   E+F+  K  +K  IL         T+YR G   DLC+GPHVR TG++K   
Sbjct: 295 LEISKEVLLEMFKYNK--FKCRILNEKVHTSTTTVYRCGPLIDLCKGPHVRHTGKIKAI- 351

Query: 199 KLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI 258
           K+ K +  YW G+     L RIYG ++   + +  +  F EE++ RDHRK+ +E +LF  
Sbjct: 352 KIFKNSSTYWEGNPEMETLQRIYGISFPDNKMMKTWEKFQEEAKNRDHRKVGKEQELFFF 411

Query: 259 AEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRAN 317
            +   G  F+  +G  I+ TL+ ++R +  + ++ E+ +P + +  LW+ SGHW  Y  N
Sbjct: 412 HDLSPGSCFFLPRGAFIYNTLMDFIREEYHRRNFTEVLSPNMFNSKLWETSGHWQHYSEN 471

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           MF      DT      FALKPMNCPGH  +F H  +S+RE+PVRLA+FG ++RNE SG+L
Sbjct: 472 MFTFDIEKDT------FALKPMNCPGHCLMFAHRPRSWREMPVRLADFGVLHRNELSGTL 525

Query: 378 HGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGS 437
            GL RVR F QDDAH+FCT EQ+  E       + S+Y  FGF    + LSTRPE  +G 
Sbjct: 526 SGLTRVRRFQQDDAHIFCTVEQIEEEIKGCLQFLQSVYSTFGF-SFQLNLSTRPENFLGE 584

Query: 438 DALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ 497
             LWD+AE  ++  L  ++     ++N     G+GAFYGPK +  +KDAIGR  QC TIQ
Sbjct: 585 VELWDEAEKQLQNSL--VEFGKPWKMNP----GDGAFYGPKIDIKIKDAIGRYHQCATIQ 638

Query: 498 VDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI 556
           +DF LP RFN  YV+    +K +PV+IHRA+ GS+ER I I+ EN+ G  P WLSP Q +
Sbjct: 639 LDFQLPIRFNLTYVSKDGDDKRNPVIIHRAILGSVERMIAILSENYGGKWPFWLSPRQVM 698

Query: 557 VTTITSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEAS 615
           V  +  +  +YA ++++         + D  +  T+N KIR   + +   I++ G+KE +
Sbjct: 699 VIPVGPTCEKYALQVSSAFFEEGFMADVDLDHSCTLNKKIRNAQLAQYNFILVVGEKEKT 758

Query: 616 ERSIGIRRFGSTTTQKVSLLDAI 638
             ++ +R   +    ++S+  AI
Sbjct: 759 NNAVNVRTRDNKIHGEISVTSAI 781


>gi|269468318|gb|EEZ79994.1| threonyl-tRNA synthetase [uncultured SUP05 cluster bacterium]
          Length = 369

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 193/378 (51%), Positives = 266/378 (70%), Gaps = 13/378 (3%)

Query: 201 MKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAE 260
           MK+AGAYWRGDSN  ML R+YGTAW ++ +L  YLY LEE+EKRDHRK+ +  DLFH+ E
Sbjct: 1   MKLAGAYWRGDSNNEMLQRVYGTAWASKDDLKDYLYRLEEAEKRDHRKIGKTQDLFHMQE 60

Query: 261 DGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMF 319
           +  G++FWH KGW ++Q +  YMR   +D DY+E++TPQ++D+ LW++SGHWD +   MF
Sbjct: 61  EAPGMVFWHEKGWTLYQIVEQYMRSVFRDNDYKEVHTPQLIDKSLWEKSGHWDKFGDAMF 120

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHG 379
                  T  + R +A+KPMNCP H+ ++N GLKSYR+LP+RLAEFGS +RNEPSG+LHG
Sbjct: 121 T------TSSENRDYAVKPMNCPAHIQIYNQGLKSYRDLPLRLAEFGSCHRNEPSGTLHG 174

Query: 380 LMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDA 439
           +MRVR F QDD H+FCT+ Q+ +E     +L   +YK+FGFE + +KLSTRPE RVGSD 
Sbjct: 175 IMRVRNFVQDDGHIFCTENQIQDEVSTFIDLTFDVYKNFGFENVDIKLSTRPENRVGSDE 234

Query: 440 LWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVD 499
           +WD      +      +      I   +  GEGAFYGPK E++LKD + R+WQCGT+QVD
Sbjct: 235 VWD------RAEAALAEALDAKGIKWDLQEGEGAFYGPKIEFVLKDCLDREWQCGTLQVD 288

Query: 500 FNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTT 559
           F++P R NA Y+   + K  PVM+HRA+ GS+ERF+GI+IE+++G  P WL+PIQA++  
Sbjct: 289 FSMPERLNAHYIAEDNSKQTPVMLHRAIVGSLERFVGILIEHYEGAFPSWLAPIQAVILN 348

Query: 560 ITSSAVEYAQEIANLLKS 577
           I+    ++   +   LK 
Sbjct: 349 ISEKQHDFVANVEKKLKG 366


>gi|326329871|ref|ZP_08196188.1| threonine--tRNA ligase [Nocardioidaceae bacterium Broad-1]
 gi|325952338|gb|EGD44361.1| threonine--tRNA ligase [Nocardioidaceae bacterium Broad-1]
          Length = 659

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 233/609 (38%), Positives = 353/609 (57%), Gaps = 39/609 (6%)

Query: 39  VAVAINGKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIG 97
           +A  +   + DLS  + +G  +E +  +      ++RHS AH+MA+AVQ ++PE ++ IG
Sbjct: 36  IAARVGEDLKDLSYELADGDEVEGVLIDSKDGHDILRHSTAHVMAQAVQELFPEAKLGIG 95

Query: 98  PIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAY 157
           P + DGFYYDFD E PF  ++L +IE +M++II  +  F ++  S E AR   E   E Y
Sbjct: 96  PPVTDGFYYDFDVETPFVPEDLVKIESRMKKIIKANQKFSRRVTSDEDAR--VELADEPY 153

Query: 158 KVEIL-------------ESIPAKENVTLY----RQGE--WFDLCRGPHVRSTGQVKKFF 198
           K+E++             ++      +T+Y    R GE  W DLCRGPH+ +T ++  F 
Sbjct: 154 KLELIGLKGSAADAAEGADAEVGGGELTIYDNLDRNGEIAWKDLCRGPHLPTTKRIPAF- 212

Query: 199 KLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI 258
           KLM+ A AYWRGD     L RIYGTAW +++ L  +L  +EE+E+RDHRKL RE+DL+  
Sbjct: 213 KLMRSAAAYWRGDEKNKQLQRIYGTAWESKEALDAHLARIEEAERRDHRKLGRELDLYSF 272

Query: 259 AED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
            ++ GSG+  +H KG  I + +  Y+RR+ I++ +  + TP +    L+  SGH   Y  
Sbjct: 273 PDELGSGLPVFHPKGGVIKREMEDYVRRRHIEEGFSYVGTPHISKDGLFHTSGHLPYYAD 332

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            MF     +        + LK M+CP H  ++    +SYRELP+RL EFG+VYR E SG 
Sbjct: 333 TMFPPMELEGA-----KYQLKAMSCPMHNLIYKAKGRSYRELPLRLFEFGTVYRYEKSGV 387

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE---K 433
           +HGL RVRG TQDD+H + TKEQ   E   + + ++ + KDFG +   ++LSTR     K
Sbjct: 388 VHGLTRVRGLTQDDSHSYVTKEQAPAEIKHLLDFVLGVLKDFGLDDFYLELSTRDADNAK 447

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
            +GSD  W+ A  I++ V      +++  +      G  AFYGPK     +DAIGR WQ 
Sbjct: 448 FIGSDEQWETATKILEDV------ATESGLELVADPGGAAFYGPKISVQARDAIGRTWQM 501

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI 553
            TIQ DFN P+RF   Y  +   +  PVMIH A FGSIERF+G+++E++ G +P WL+P+
Sbjct: 502 STIQYDFNQPARFGLEYQAADGTRQEPVMIHSAKFGSIERFLGVLVEHYAGAMPPWLAPV 561

Query: 554 QAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
           Q +   +  +  +Y  E+A  LK+  + +E D  ++    KIR   ++KIP ++I G ++
Sbjct: 562 QVVGIPVADAFADYLYEVAGKLKAKGIRVEVDESDDRFQKKIRNAQLQKIPFMLIAGGED 621

Query: 614 ASERSIGIR 622
             + ++  R
Sbjct: 622 VEKGAVSFR 630


>gi|73951037|ref|XP_536172.2| PREDICTED: similar to threonyl-tRNA synthetase-like 2 isoform 1
           [Canis familiaris]
          Length = 802

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 240/623 (38%), Positives = 361/623 (57%), Gaps = 22/623 (3%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAH 79
            T   VA  IS  LA+  V   +NG++ DL  P+  + ++E++T ++  + AV  HS AH
Sbjct: 179 TTPYQVAAEISPELAESTVVAKVNGELWDLDRPLEGDSTLELLTFDNEEAQAVYWHSSAH 238

Query: 80  IMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQIEKKMQEIIARDSPFLK 138
           I+ EA++ ++    +  GP IE+GFYYD F +++  SS EL+ +E   + II    PF +
Sbjct: 239 ILGEAME-LYYGGHLCYGPPIENGFYYDMFIEDRAVSSTELSALENICKTIIKEKQPFER 297

Query: 139 QYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFF 198
             +S E   E+F+  K  +K  IL         T+YR G   DLC+GPHVR TG++K   
Sbjct: 298 LEISKEVLLEMFKYNK--FKCRILNEKVHTSTTTVYRCGPLIDLCKGPHVRHTGKIKAI- 354

Query: 199 KLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI 258
           K+ K +  YW G+     L RIYG ++   + +  +  F EE++ RDHRK+ +E +LF  
Sbjct: 355 KIFKNSSTYWEGNPEMETLQRIYGISFPDNKMMKTWEKFQEEAKNRDHRKVGKEQELFFF 414

Query: 259 AEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRAN 317
            +   G  F+  +G  I+ TL+ ++R +  + ++ E+ +P + +  LW+ SGHW  Y  N
Sbjct: 415 HDLSPGSCFFLPRGAFIYNTLMDFIREEYHRRNFTEVLSPNMFNSKLWETSGHWQHYSEN 474

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           MF      DT      FALKPMNCPGH  +F H  +S+RE+PVRLA+FG ++RNE SG+L
Sbjct: 475 MFTFDIEKDT------FALKPMNCPGHCLMFAHRPRSWREMPVRLADFGVLHRNELSGTL 528

Query: 378 HGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGS 437
            GL RVR F QDDAH+FCT EQ+  E       + S+Y  FGF    + LSTRPE  +G 
Sbjct: 529 SGLTRVRRFQQDDAHIFCTVEQIEEEIKGCLQFLQSVYSTFGF-SFQLNLSTRPENFLGE 587

Query: 438 DALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ 497
             LWD+AE  ++  L  ++     ++N     G+GAFYGPK +  +KDAIGR  QC TIQ
Sbjct: 588 VELWDEAEKQLQNSL--VEFGKPWKMNP----GDGAFYGPKIDIKIKDAIGRYHQCATIQ 641

Query: 498 VDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI 556
           +DF LP RFN  YV+    +K +PV+IHRA+ GS+ER I I+ EN+ G  P WLSP Q +
Sbjct: 642 LDFQLPIRFNLTYVSKDGDDKRNPVIIHRAILGSVERMIAILSENYGGKWPFWLSPRQVM 701

Query: 557 VTTITSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEAS 615
           V  +  +  +YA ++++         + D  +  T+N KIR   + +   I++ G+KE +
Sbjct: 702 VIPVGPTCEKYALQVSSAFFEEGFMADVDLDHSCTLNKKIRNAQLAQYNFILVVGEKEKT 761

Query: 616 ERSIGIRRFGSTTTQKVSLLDAI 638
             ++ +R   +    ++S+  AI
Sbjct: 762 NNAVNVRTRDNKIHGEISVTSAI 784


>gi|227872012|ref|ZP_03990397.1| threonine--tRNA ligase [Oribacterium sinus F0268]
 gi|227842155|gb|EEJ52400.1| threonine--tRNA ligase [Oribacterium sinus F0268]
          Length = 627

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 234/607 (38%), Positives = 346/607 (57%), Gaps = 45/607 (7%)

Query: 70  LAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQE 128
           L   RHS AHI+A+A+  ++ PEVQ AIGP IEDG YYDF   +  S ++   IE KM+E
Sbjct: 9   LERYRHSLAHILAKAMVELYGPEVQYAIGPQIEDGCYYDFALPKSLSEEDFKTIEDKMRE 68

Query: 129 IIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF-DLCRGPH 187
           II R   + ++ LS E A  LF+ +K  +K E+++ +PA E +++YR G+ F DLCRGPH
Sbjct: 69  IIKRREDWTREELSREAALALFDKQK--FKKELIQDLPADEVISIYRTGDDFVDLCRGPH 126

Query: 188 VRSTGQVKKF-FKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDH 246
           V ++ ++    F++  ++GAYWRGD +R  L R+Y  A+  +  L ++L +L+E+++RDH
Sbjct: 127 VENSQELMNVAFQIKSISGAYWRGDEHRDQLQRVYLFAYPDKIALKEHLKWLQEAQERDH 186

Query: 247 RKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLW 305
           +KL  ++DLF   E   G+ +W  +GWK++Q L++Y R  + K  Y EI+ P + ++ LW
Sbjct: 187 KKLGSQLDLFMFDETAPGMPYWLPRGWKMYQALLAYSRSVQAKHGYTEISAPLINNKKLW 246

Query: 306 QQSGHWDSYRANMFAVKCADDTIK----------------------------------DL 331
             SGHW  Y  NMF V      +K                                  ++
Sbjct: 247 LISGHWAHYINNMFMVPGISGWLKADADLSGVLEHPTDASLGEKIVKIQAGSVIYNRENI 306

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
            T A KPMNCP  +  +    +SY+ELP+R +E+  ++R E SG ++GL RV+ F QDD 
Sbjct: 307 DTMAAKPMNCPNAMITYKRRNRSYKELPIRYSEYDVLHRKEKSGQMNGLFRVQEFRQDDD 366

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
           H F  + Q+  E   I ++   +YK FG      +LSTRP+  +G   +WD AE  +K +
Sbjct: 367 HTFVMESQIEAEIADIISIADEVYKTFGV-TYRAELSTRPDDFMGDIEVWDRAEAALKKI 425

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
           L          IN G    +GAFYGPK +  +KDA+GR+WQCGTIQ+DF LP  F   Y 
Sbjct: 426 LTDKYGEGGFEINEG----DGAFYGPKIDLQIKDALGREWQCGTIQLDFQLPHNFGLTYQ 481

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
            +      PV+IHRA++GS+ERFIGI+IENFKG+ P WLSP Q  +  I     +Y ++I
Sbjct: 482 TAEGSTAMPVVIHRAIYGSLERFIGIIIENFKGSFPFWLSPEQVGIVPIREEHNDYGKKI 541

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
              L    +  E D+ ++ +  KI+ +   K P I++ GDKE  E+++ I   GS     
Sbjct: 542 YEALSDMGIRAEIDYSDKNMKEKIKTYKNYKNPYILVLGDKEMEEKAVSINMRGSNKQIN 601

Query: 632 VSLLDAI 638
              LDA 
Sbjct: 602 NVPLDAF 608


>gi|77735697|ref|NP_001029542.1| threonyl-tRNA synthetase, cytoplasmic [Bos taurus]
 gi|110287979|sp|Q3ZBV8|SYTC_BOVIN RecName: Full=Threonyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|73586669|gb|AAI03083.1| Threonyl-tRNA synthetase [Bos taurus]
 gi|296475710|gb|DAA17825.1| threonyl-tRNA synthetase [Bos taurus]
          Length = 723

 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 246/625 (39%), Positives = 361/625 (57%), Gaps = 25/625 (4%)

Query: 5   IKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEII 62
           IK+T PDG  +       T   +A  IS+ LA   V   +N  V DL  P+ E  ++E++
Sbjct: 83  IKVTLPDGKQVDAESWKTTPYQIACGISQGLADNTVIAKVNKAVWDLDRPLEEDCTLELL 142

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQ 121
             ED  + AV  HS AHIM EA++ ++    +  GP IE+GFYYD + +E   SS++ + 
Sbjct: 143 KFEDEEAQAVYWHSSAHIMGEAMERVYGGC-LCYGPPIENGFYYDMYLEEGGVSSNDFSS 201

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +E   ++II     F +  +  E   E+F+  K  +K  IL         T+YR G   D
Sbjct: 202 LETLCKKIIKEKQAFERLEVKKETLLEMFKYNK--FKCRILNEKVNTPTTTVYRCGPLID 259

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHVR TG++K   K+ K +  YW G S+   L RIYG ++   + L ++  F EE+
Sbjct: 260 LCRGPHVRHTGKIKTL-KIHKNSSTYWEGKSDMETLQRIYGISFPDPKMLKEWEKFQEEA 318

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVL 300
           + RDHRK+ R+ +L+   E   G  F+  KG  I+ TLI ++R +  K  ++E+ TP + 
Sbjct: 319 KNRDHRKIGRDQELYFFHELSPGSCFFLPKGAYIYNTLIEFIRSEYRKRGFQEVVTPNIY 378

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  LW  SGHW+ Y  NMF+ +   +       FALKPMNCPGH  +F+H  +S+RELP+
Sbjct: 379 NSRLWVTSGHWEHYSENMFSFEVEKEL------FALKPMNCPGHCLMFDHRPRSWRELPL 432

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+A+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E     + + ++Y  FGF
Sbjct: 433 RVADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSIFGF 492

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
               + LSTRPEK +G   +W+ AE  ++  L+      +  +N     G+GAFYGPK +
Sbjct: 493 -SFKLNLSTRPEKFLGDIEVWNQAEKQLENSLNDFGEKWE--LNP----GDGAFYGPKID 545

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH--SEKCHPVMIHRAVFGSIERFIGIM 538
             +KDAIGR  QC TIQ+DF LP RFN  +V SH   +K  PV+IHRA+ GS+ER I I+
Sbjct: 546 IQIKDAIGRYHQCATIQLDFQLPIRFNLTFV-SHDGDDKKKPVIIHRAILGSVERMIAIL 604

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIRE 597
            EN+ G  P WLSP Q +V  +  +  EYAQ++     +    ++ D     T+N KIR 
Sbjct: 605 TENYGGKWPFWLSPRQVMVVPVGPTCDEYAQKVRQQFHNAKFMVDIDLDPGCTLNKKIRN 664

Query: 598 HSIKKIPIIIICGDKEASERSIGIR 622
             + +   I++ G+KE +  ++ IR
Sbjct: 665 AQLAQYNFILVVGEKEKTSGTVNIR 689


>gi|73951033|ref|XP_857231.1| PREDICTED: similar to threonyl-tRNA synthetase-like 2 isoform 4
           [Canis familiaris]
          Length = 798

 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 238/622 (38%), Positives = 359/622 (57%), Gaps = 21/622 (3%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAH 79
            T   VA  IS  LA+  V   +NG++ DL  P+  + ++E++T ++  + AV  HS AH
Sbjct: 176 TTPYQVAAEISPELAESTVVAKVNGELWDLDRPLEGDSTLELLTFDNEEAQAVYWHSSAH 235

Query: 80  IMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQIEKKMQEIIARDSPFLK 138
           I+ EA++ ++    +  GP IE+GFYYD F +++  SS EL+ +E   + II    PF +
Sbjct: 236 ILGEAME-LYYGGHLCYGPPIENGFYYDMFIEDRAVSSTELSALENICKTIIKEKQPFER 294

Query: 139 QYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFF 198
             +S E   E+F+  K  +K  IL         T+YR G   DLC+GPHVR TG++K   
Sbjct: 295 LEISKEVLLEMFKYNK--FKCRILNEKVHTSTTTVYRCGPLIDLCKGPHVRHTGKIKAI- 351

Query: 199 KLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI 258
           K+ K +  YW G+     L RIYG ++   + +  +  F EE++ RDHRK+ +E +LF  
Sbjct: 352 KIFKNSSTYWEGNPEMETLQRIYGISFPDNKMMKTWEKFQEEAKNRDHRKVGKEQELFFF 411

Query: 259 AEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRAN 317
            +   G  F+  +G  I+ TL+ ++R +  + ++ E+ +P + +  LW+ SGHW  Y  N
Sbjct: 412 HDLSPGSCFFLPRGAFIYNTLMDFIREEYHRRNFTEVLSPNMFNSKLWETSGHWQHYSEN 471

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           MF      DT      FALKPMNCPGH  +F H  +S+RE+PVRLA+FG ++RNE SG+L
Sbjct: 472 MFTFDIEKDT------FALKPMNCPGHCLMFAHRPRSWREMPVRLADFGVLHRNELSGTL 525

Query: 378 HGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGS 437
            GL RVR F QDDAH+FCT EQ+  E       + S+Y  FGF    + LSTRPE  +G 
Sbjct: 526 SGLTRVRRFQQDDAHIFCTVEQIEEEIKGCLQFLQSVYSTFGF-SFQLNLSTRPENFLGE 584

Query: 438 DALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ 497
             LWD+AE  ++  L  ++     ++N     G+GAFYGPK +  +KDAIGR  QC TIQ
Sbjct: 585 VELWDEAEKQLQNSL--VEFGKPWKMNP----GDGAFYGPKIDIKIKDAIGRYHQCATIQ 638

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIV 557
           +DF LP RFN  Y +   +  +PV+IHRA+ GS+ER I I+ EN+ G  P WLSP Q +V
Sbjct: 639 LDFQLPIRFNLTYRSRSGKIRNPVIIHRAILGSVERMIAILSENYGGKWPFWLSPRQVMV 698

Query: 558 TTITSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASE 616
             +  +  +YA ++++         + D  +  T+N KIR   + +   I++ G+KE + 
Sbjct: 699 IPVGPTCEKYALQVSSAFFEEGFMADVDLDHSCTLNKKIRNAQLAQYNFILVVGEKEKTN 758

Query: 617 RSIGIRRFGSTTTQKVSLLDAI 638
            ++ +R   +    ++S+  AI
Sbjct: 759 NAVNVRTRDNKIHGEISVTSAI 780


>gi|328778641|ref|XP_395662.3| PREDICTED: threonyl-tRNA synthetase, cytoplasmic-like isoform 1
           [Apis mellifera]
          Length = 718

 Score =  434 bits (1115), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 236/625 (37%), Positives = 362/625 (57%), Gaps = 22/625 (3%)

Query: 3   SDIKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIE 60
           +DIK+  PDG  I     H T  ++A++IS+ LA   +   +N ++ DL  P+     +E
Sbjct: 77  TDIKVILPDGKEIIAQSWHTTPYEIAKNISQGLADNTIIAKVNNELWDLDRPLEFNCKLE 136

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDEL 119
           ++  + P +  V  HS AHI+ E ++ ++    +  GP IE+GFYYD +  ++  S+ + 
Sbjct: 137 LLKFDHPDAQQVFWHSSAHILGETMERVYGGC-LCYGPPIENGFYYDMYLDDKGISNLDF 195

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             +E   + I+    PF +  ++ E   E+F  K   +K+ I+         T+YR G  
Sbjct: 196 PFLESLYKSIVKDKQPFERLEMTKEDLLEMF--KYNEFKIRIINEKIHTPTTTVYRCGPL 253

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPH+R TG+VK   K+ K +  YW G++N   L R+YG ++   ++L ++  F E
Sbjct: 254 IDLCRGPHIRHTGKVKAI-KITKNSSTYWEGNANAESLQRVYGISFPDTKQLKEWEKFQE 312

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+ KRDHRK+ +E +LF   E   G  F+  +G  I+ TL+ ++R +  K  ++E+ TP 
Sbjct: 313 EAAKRDHRKIGKEQELFFFHELSPGSCFFQPRGAYIYNTLVEFIRSEYRKRGFQEVVTPN 372

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           + +  LWQ SGHW  Y  NMF+     +T      FALKPMNCPGH  +F+   +S+REL
Sbjct: 373 IYNNKLWQTSGHWLHYAENMFSFDVEKET------FALKPMNCPGHCMIFDVRNRSWREL 426

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+A+FG ++RNE SG+L GL RVR F QDDAH+FC+ +Q+ +E +     +  +Y  F
Sbjct: 427 PLRMADFGVLHRNEMSGALTGLTRVRRFQQDDAHIFCSVDQIKDEMIGALEFLKHVYSVF 486

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF    + LSTRPEK +G   +W+ AE  +   LD      Q +IN      +GAFYGPK
Sbjct: 487 GF-TFNLCLSTRPEKYLGDLEMWNQAEKALAESLDAF--GEQWKINPE----DGAFYGPK 539

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +  + DA+ R  QC TIQ+DF LP RFN  YVN   EK  PV+IHRA+ GS+ER I I+
Sbjct: 540 IDITIMDALKRAHQCATIQLDFQLPIRFNLSYVNEAGEKTRPVIIHRAILGSVERMIAIL 599

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIRE 597
            E++ G  P WLSP Q +V  ++S   +YA ++ + L +     E D   ++T+N KIR 
Sbjct: 600 TESYAGKWPFWLSPRQVMVIPVSSQFDDYAIQVKDKLWNDGFMAELDTDPSDTLNKKIRN 659

Query: 598 HSIKKIPIIIICGDKEASERSIGIR 622
             + +   I++ G+KE +  ++ +R
Sbjct: 660 AQLAQFNFILVVGEKELNAGTVNVR 684


>gi|27229277|ref|NP_149065.2| threonyl-tRNA synthetase, cytoplasmic [Mus musculus]
 gi|59896669|sp|Q9D0R2|SYTC_MOUSE RecName: Full=Threonyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|26373003|dbj|BAB27429.2| unnamed protein product [Mus musculus]
 gi|74177703|dbj|BAE38950.1| unnamed protein product [Mus musculus]
 gi|74195699|dbj|BAE39654.1| unnamed protein product [Mus musculus]
 gi|74223282|dbj|BAE40773.1| unnamed protein product [Mus musculus]
 gi|74225376|dbj|BAE31616.1| unnamed protein product [Mus musculus]
 gi|148671337|gb|EDL03284.1| threonyl-tRNA synthetase, isoform CRA_b [Mus musculus]
          Length = 722

 Score =  434 bits (1115), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 245/625 (39%), Positives = 359/625 (57%), Gaps = 25/625 (4%)

Query: 5   IKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           IK+T PDG  +       T   +A  IS+ LA   V   +N  V DL  P+  + ++E++
Sbjct: 82  IKVTLPDGKQVDAESWKTTPYQIACGISQGLADNTVVAKVNKVVWDLDRPLETDCTLELL 141

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQ 121
             ED  + AV  HS AHIM EA++ ++    +  GP IE+GFYYD + +E   SS++ + 
Sbjct: 142 KFEDEEAQAVYWHSSAHIMGEAMERVYGGC-LCYGPPIENGFYYDMYLEEGGVSSNDFSS 200

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +E   ++II     F +  +  E   E+F+  K  +K  IL         T+YR G   D
Sbjct: 201 LETLCKKIIKEKQTFERLEVKKETLLEMFKYNK--FKCRILNEKVNTPTTTVYRCGPLID 258

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHVR TG++K   K+ K +  YW G ++   L RIYG ++   + L ++  F EE+
Sbjct: 259 LCRGPHVRHTGKIKTL-KIHKNSSTYWEGKADMETLQRIYGISFPDPKLLKEWEKFQEEA 317

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVL 300
           + RDHRK+ R+ +L+   E   G  F+  KG  I+ TL+ ++R +  K  ++E+ TP + 
Sbjct: 318 KNRDHRKIGRDQELYFFHELSPGSCFFLPKGAYIYNTLMEFIRSEYRKRGFQEVVTPNIF 377

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  LW  SGHW  Y  NMF+ +   +       FALKPMNCPGH  +F+H  +S+RELP+
Sbjct: 378 NSRLWMTSGHWQHYSENMFSFEVEKEQ------FALKPMNCPGHCLMFDHRPRSWRELPL 431

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLA+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E     + + ++Y  FGF
Sbjct: 432 RLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSVFGF 491

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
               + LSTRPEK +G   +W+ AE  ++  L+      +  +N     G+GAFYGPK +
Sbjct: 492 -SFKLNLSTRPEKFLGDIEIWNQAEKQLENSLNEFGEKWE--LNP----GDGAFYGPKID 544

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH--SEKCHPVMIHRAVFGSIERFIGIM 538
             +KDAIGR  QC TIQ+DF LP RFN  YV SH   +K  PV++HRA+ GS+ER I I+
Sbjct: 545 IQIKDAIGRYHQCATIQLDFQLPIRFNLTYV-SHDGDDKKRPVIVHRAILGSVERMIAIL 603

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIRE 597
            EN+ G  P WLSP Q +V  +  +  EYAQ++           +TD     T+N KIR 
Sbjct: 604 TENYGGKWPFWLSPRQVMVVPVGPTCDEYAQKVRQQFHDAKFMADTDLDPGCTLNKKIRN 663

Query: 598 HSIKKIPIIIICGDKEASERSIGIR 622
             + +   I++ G+KE +  ++ IR
Sbjct: 664 AQLAQYNFILVVGEKEKASGTVNIR 688


>gi|282853974|ref|ZP_06263311.1| threonine--tRNA ligase [Propionibacterium acnes J139]
 gi|282583427|gb|EFB88807.1| threonine--tRNA ligase [Propionibacterium acnes J139]
          Length = 684

 Score =  434 bits (1115), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 240/644 (37%), Positives = 355/644 (55%), Gaps = 50/644 (7%)

Query: 36  KKAVAVAINGKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           +  VA+ ++G + DL   + +G+ +E +       L +IRHS  H+MA+AVQ ++PEV +
Sbjct: 32  RAVVAMRVDGNLVDLQRELHDGAEVEPVEATSEDGLNIIRHSATHVMAQAVQQLYPEVNL 91

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            IGP I DGFYYDF   +P + + L+++EK+M+ I+  +  F+++  + E ARE  E   
Sbjct: 92  GIGPFITDGFYYDFGNIEPVTPEVLSELEKRMKRIVKENQRFVRRVTTEESARE--ELAD 149

Query: 155 EAYKVEILESIP----------AKENVTLY----RQGE--WFDLCRGPHVRSTGQVKKFF 198
           + YK+E++ +                +T+Y    R GE  W DLCRGPHV ST  +   F
Sbjct: 150 QPYKLELIGTKGKGAEGASVEVGGGELTIYDNVRRNGEVAWKDLCRGPHVPSTKYLANAF 209

Query: 199 KLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI 258
            L K + AYW+GD     L RIYGTAW ++++L  Y   ++E+E+RDHRKL  E+DLF  
Sbjct: 210 ALTKFSAAYWKGDQANDQLQRIYGTAWASREDLAAYQQRIKEAERRDHRKLGAELDLFSF 269

Query: 259 AED-GSGVIFWHRKGWKIFQTLIS--YMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYR 315
            E+ G G++ +H KG  + + LI    + R ++  +  ++TP++    L+  SGH   Y 
Sbjct: 270 PEEIGPGLVVFHPKG-AMLRHLIEEHVIARHMEAGFNFVHTPEITKGGLFHTSGHLPYYA 328

Query: 316 ANMFAVKCAD-------DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV 368
             MF     D       +  +  + + LK MNCP H  +F    +SYRELP+R  E G  
Sbjct: 329 GTMFPPMLVDEERDEEGNVTRAGQEYYLKAMNCPMHNLIFRSRGRSYRELPLRFFEMGHD 388

Query: 369 YRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLS 428
           YR E SG +HGL R+RGF QDD+H +CT+EQ   E  K     +SI  DFG     ++LS
Sbjct: 389 YRYEKSGVVHGLTRMRGFAQDDSHTYCTREQAPGEIKKQIEFFLSILADFGLNDFYLELS 448

Query: 429 TRP------EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL----GEGAFYGPK 478
           TR       EK +GSD  W  A +     LD +  S      TG+ L    G  AFYGPK
Sbjct: 449 TRESDSAKEEKFIGSDEDWQVATD----TLDQVCRS------TGLQLVPDPGGAAFYGPK 498

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
               ++DAIGR WQ  TIQ DFN P RF+  Y  +      P+M+H A  GS+ERFIG++
Sbjct: 499 VSVQVRDAIGRTWQMSTIQYDFNQPERFDLEYAAADGTHQRPIMLHSAKLGSVERFIGVL 558

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
            E++ G  P+WLSP+Q  +  +  +  +Y    A +L SH + +ETD  ++    KIR  
Sbjct: 559 TEHYAGAFPVWLSPVQVRLVPVAEAFNDYVTGFAEVLGSHGIRVETDLSSDRFGKKIRNA 618

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           S  K+P I+I G ++A   ++  R    +    V L +A+ I+T
Sbjct: 619 SKDKVPFILIAGGEDAEAGAVSFRLRDGSQINGVVLDEAVRIIT 662


>gi|314981048|gb|EFT25142.1| threonyl-tRNA synthetase [Propionibacterium acnes HL110PA3]
 gi|315091876|gb|EFT63852.1| threonyl-tRNA synthetase [Propionibacterium acnes HL110PA4]
          Length = 689

 Score =  433 bits (1114), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 238/643 (37%), Positives = 354/643 (55%), Gaps = 48/643 (7%)

Query: 36  KKAVAVAINGKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           +  VA+ ++G + DL   + +G+ +E +       L +IRHS  H+MA+AVQ ++PEV +
Sbjct: 37  RAVVAMRVDGNLVDLQRELHDGAEVEPVEATSEDGLNIIRHSATHVMAQAVQQLYPEVNL 96

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            IGP I DGFYYDF   +P + + L+++EK+M+ I+  +  F+++  + E ARE  E   
Sbjct: 97  GIGPFITDGFYYDFGNIEPVTPEVLSELEKRMKRIVKENQRFVRRVTTEESARE--ELAD 154

Query: 155 EAYKVEILESIP----------AKENVTLY----RQGE--WFDLCRGPHVRSTGQVKKFF 198
           + YK+E++ +                +T+Y    R GE  W DLCRGPHV ST  +   F
Sbjct: 155 QPYKLELIGTKGKGAEGASVEVGGGELTIYDNVRRNGEVAWKDLCRGPHVPSTKYLANAF 214

Query: 199 KLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI 258
            L K + AYW+GD     L RIYGTAW ++++L  Y   ++E+E+RDHRKL  E+DLF  
Sbjct: 215 ALTKFSAAYWKGDQANDQLQRIYGTAWASREDLAAYQQRIKEAERRDHRKLGAELDLFSF 274

Query: 259 AED-GSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
            E+ G G++ +H KG  +   +  + + R ++  +  ++TP++    L+  SGH   Y  
Sbjct: 275 PEEIGPGLVVFHPKGAMLRHLIEEHVIARHMEAGFNFVHTPEITKGGLFHTSGHLPYYAG 334

Query: 317 NMFAVKCAD-------DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVY 369
            MF     D       +  +  + + LK MNCP H  +F    +SYRELP+R  E G  Y
Sbjct: 335 TMFPPMLVDEERDEEGNVTRAGQEYYLKAMNCPMHNLIFRSRGRSYRELPLRFFEMGHDY 394

Query: 370 RNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
           R E SG +HGL R+RGF QDD+H +CT+EQ   E  K     +SI  DFG     ++LST
Sbjct: 395 RYEKSGVVHGLTRMRGFAQDDSHTYCTREQAPGEIKKQIEFFLSILADFGLNDFYLELST 454

Query: 430 RP------EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL----GEGAFYGPKF 479
           R       EK +GSD  W  A +     LD +  S      TG+ L    G  AFYGPK 
Sbjct: 455 RESDSAKEEKFIGSDEDWQVATD----TLDQVCRS------TGLQLVPDPGGAAFYGPKV 504

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
              ++DAIGR WQ  TIQ DFN P RF+  Y  +      P+M+H A  GS+ERFIG++ 
Sbjct: 505 SVQVRDAIGRTWQMSTIQYDFNQPERFDLEYAAADGTHQRPIMLHSAKLGSVERFIGVLT 564

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E++ G  P+WLSP+Q  +  +  +  +Y    A +L SH + +ETD  ++    KIR  S
Sbjct: 565 EHYAGAFPVWLSPVQVRLVPVAEAFNDYVTGFAEVLGSHGIRVETDLSSDRFGKKIRNAS 624

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             K+P I+I G ++A   ++  R    +    V L +A+ I+T
Sbjct: 625 KDKVPFILIAGGEDAEAGAVSFRLRDGSQINGVVLDEAVRIIT 667


>gi|227503501|ref|ZP_03933550.1| threonyl-tRNA synthetase [Corynebacterium accolens ATCC 49725]
 gi|227076004|gb|EEI13967.1| threonyl-tRNA synthetase [Corynebacterium accolens ATCC 49725]
          Length = 687

 Score =  433 bits (1114), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 246/660 (37%), Positives = 378/660 (57%), Gaps = 50/660 (7%)

Query: 20  HATGSDVAESISRSLAKKAVAV--AINGKVCDLS-DPVREGSIEIITPEDPRSLAVIRHS 76
            A G+ + E    +   +AV V   ++G + DLS  P  E +   +   +    AVIRHS
Sbjct: 21  QAVGAALRELNLPNKGPEAVVVVRGVDGTLYDLSHTPDEESTFVPVAACEEDGRAVIRHS 80

Query: 77  CAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPF 136
           CAH+MA+AVQ+ +P  ++ IGP IE+GFY+DF   +PF+ ++L  +EK+M++II     F
Sbjct: 81  CAHVMAQAVQAEFPGTKLGIGPSIENGFYFDFQTAEPFTPEDLKNLEKRMKKIIKGGQRF 140

Query: 137 LKQ-YLSHEKARELFESKKEAYKVEILE--------SIPAKE----NVTLY-------RQ 176
            +  Y S  +A +  +   E +K+E+++        S  A E    ++T Y        +
Sbjct: 141 ERHTYASTAEAEQALQD--EPFKLELIQDKGNVDPDSDEAAEVGAGDLTHYDNVNPRTNE 198

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
            EWFDLCRGPHV +T  +  F  L + + AYWRGD     L RIYGTA+ ++  L  Y  
Sbjct: 199 VEWFDLCRGPHVPTTKYIPAF-ALTRSSAAYWRGDQANAGLQRIYGTAFESKDALAAYQT 257

Query: 237 FLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEI 294
            +EE+EKRDHR+L +E+DLF   ++ GSG   +H  G  +   + ++ R R ++  Y  +
Sbjct: 258 MVEEAEKRDHRRLGQELDLFSFPDEIGSGFPVFHPNGATVRMEMENHSRNRHVQAGYSFV 317

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCAD-------DTIKDLRTFALKPMNCPGHVAV 347
           NTP +    L+++SGH D Y   MF     D       +T+K+ + +  KPMNCP H  +
Sbjct: 318 NTPHITKGDLFRKSGHLDFYSDGMFPPMQLDGEYDAEGNTVKEPQDYYAKPMNCPMHNLI 377

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
           F    +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDDAH++CT+EQ+  E  ++
Sbjct: 378 FASRGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYCTEEQLEEELTQV 437

Query: 408 HNLIISIYKDFGFEKIMVKLSTR-PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
            + IIS+ +D+G     ++LST+ P K VGSD +W+ +  I++ V +           +G
Sbjct: 438 LDFIISLLEDYGLSDFYLELSTKDPNKFVGSDEIWERSTAILQSVAE----------KSG 487

Query: 467 VLL---GEGA-FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
           + L    EGA FYGPK     +DAIGR WQ  T+Q+DFNLP RF   Y  S   K  P+M
Sbjct: 488 LELVPDPEGAAFYGPKISVQARDAIGRTWQMSTVQLDFNLPERFELEYTASDGTKKRPIM 547

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSI 582
           IHRA+FGSIERF G+++E++ G  P WL+P Q +   +    V + + +A  L+   +  
Sbjct: 548 IHRALFGSIERFFGVLLEHYAGAFPAWLAPHQVMGIPVADDFVPHLEGVAAKLRRKGIRA 607

Query: 583 ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           + D  ++ +  KIR H+  K+P +++ G ++    ++  R    T    V + +A+ +++
Sbjct: 608 DVDTSDDRMQKKIRNHTTGKVPFMLVAGARDVEAGAVSFRFLDGTQVNGVPVDEAVELIS 667


>gi|281341862|gb|EFB17446.1| hypothetical protein PANDA_008118 [Ailuropoda melanoleuca]
          Length = 678

 Score =  433 bits (1114), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 245/625 (39%), Positives = 360/625 (57%), Gaps = 25/625 (4%)

Query: 5   IKLTFPDGSIKNFPV-HATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEII 62
           IK+T PDG   N      T   +A  IS+ LA   V   +N  V DL  P+ E  ++E++
Sbjct: 38  IKVTLPDGKQVNAESWKTTPYQIAYGISQGLADNTVIAKVNQVVWDLDRPLEEDCTLELL 97

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQ 121
             ED  + AV  HS AHIM EA++ ++    +  GP IE+GFYYD + +E   SS++ + 
Sbjct: 98  KFEDEEAQAVYWHSSAHIMGEAMERVYGGC-LCYGPPIENGFYYDMYLEEGGVSSNDFSS 156

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +E   ++II     F +  +  E   E+F+  K  +K  IL         T+YR G   D
Sbjct: 157 LEALCKKIIKEKQAFERLEVKKETLLEMFKYNK--FKCRILNEKVNTPTTTVYRCGPLID 214

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHVR TG++K   K+ K +  YW G ++   L RIYG ++   + L ++  F EE+
Sbjct: 215 LCRGPHVRHTGKIKTL-KIHKNSSTYWEGKADMETLQRIYGISFPDPKMLKEWEKFQEEA 273

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVL 300
           + RDHRK+ R+ +L+   E   G  F+  KG  I+ TLI ++R +  K  ++E+ +P + 
Sbjct: 274 KNRDHRKIGRDQELYFFHELSPGSCFFLPKGAYIYNTLIEFIRSEYRKRGFQEVVSPNIY 333

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  LW  SGHW  Y  NMF+ +   +       FALKPMNCPGH  +F+H  +S+RELP+
Sbjct: 334 NSRLWMTSGHWQHYSENMFSFEVEKEL------FALKPMNCPGHCLMFDHRPRSWRELPL 387

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+A+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E     + + ++Y  FGF
Sbjct: 388 RIADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAIEQIEDEIKGCLDFLRTVYNVFGF 447

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
               + LSTRPEK +G   +W+ AE  ++  L+      +  +N     G+GAFYGPK +
Sbjct: 448 -SFKLNLSTRPEKFLGDIEVWNQAEKQLENSLNEFGEKWE--LNP----GDGAFYGPKID 500

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH--SEKCHPVMIHRAVFGSIERFIGIM 538
             +KDAIGR  QC TIQ+DF LP RFN  +V SH   +K  PV++HRA+ GS+ER I I+
Sbjct: 501 IQIKDAIGRYHQCATIQLDFQLPIRFNLTFV-SHDGDDKKRPVIVHRAILGSVERMIAIL 559

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIRE 597
            ENF G  P WLSP Q +V  +  +  EYAQ++         +++ D     T+N KIR 
Sbjct: 560 TENFGGKWPFWLSPRQVMVVPVGPTCDEYAQKVRQQFHDAKFTVDIDLDPGCTLNKKIRN 619

Query: 598 HSIKKIPIIIICGDKEASERSIGIR 622
             + +   I++ G+KE +  ++ IR
Sbjct: 620 AQLAQYNFILVIGEKEKASGTVNIR 644


>gi|301768134|ref|XP_002919483.1| PREDICTED: threonyl-tRNA synthetase, cytoplasmic-like [Ailuropoda
           melanoleuca]
          Length = 723

 Score =  433 bits (1114), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 245/625 (39%), Positives = 360/625 (57%), Gaps = 25/625 (4%)

Query: 5   IKLTFPDGSIKNFPV-HATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEII 62
           IK+T PDG   N      T   +A  IS+ LA   V   +N  V DL  P+ E  ++E++
Sbjct: 83  IKVTLPDGKQVNAESWKTTPYQIAYGISQGLADNTVIAKVNQVVWDLDRPLEEDCTLELL 142

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQ 121
             ED  + AV  HS AHIM EA++ ++    +  GP IE+GFYYD + +E   SS++ + 
Sbjct: 143 KFEDEEAQAVYWHSSAHIMGEAMERVYGGC-LCYGPPIENGFYYDMYLEEGGVSSNDFSS 201

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +E   ++II     F +  +  E   E+F+  K  +K  IL         T+YR G   D
Sbjct: 202 LEALCKKIIKEKQAFERLEVKKETLLEMFKYNK--FKCRILNEKVNTPTTTVYRCGPLID 259

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHVR TG++K   K+ K +  YW G ++   L RIYG ++   + L ++  F EE+
Sbjct: 260 LCRGPHVRHTGKIKTL-KIHKNSSTYWEGKADMETLQRIYGISFPDPKMLKEWEKFQEEA 318

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVL 300
           + RDHRK+ R+ +L+   E   G  F+  KG  I+ TLI ++R +  K  ++E+ +P + 
Sbjct: 319 KNRDHRKIGRDQELYFFHELSPGSCFFLPKGAYIYNTLIEFIRSEYRKRGFQEVVSPNIY 378

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  LW  SGHW  Y  NMF+ +   +       FALKPMNCPGH  +F+H  +S+RELP+
Sbjct: 379 NSRLWMTSGHWQHYSENMFSFEVEKEL------FALKPMNCPGHCLMFDHRPRSWRELPL 432

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+A+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E     + + ++Y  FGF
Sbjct: 433 RIADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAIEQIEDEIKGCLDFLRTVYNVFGF 492

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
               + LSTRPEK +G   +W+ AE  ++  L+      +  +N     G+GAFYGPK +
Sbjct: 493 -SFKLNLSTRPEKFLGDIEVWNQAEKQLENSLNEFGEKWE--LNP----GDGAFYGPKID 545

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH--SEKCHPVMIHRAVFGSIERFIGIM 538
             +KDAIGR  QC TIQ+DF LP RFN  +V SH   +K  PV++HRA+ GS+ER I I+
Sbjct: 546 IQIKDAIGRYHQCATIQLDFQLPIRFNLTFV-SHDGDDKKRPVIVHRAILGSVERMIAIL 604

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIRE 597
            ENF G  P WLSP Q +V  +  +  EYAQ++         +++ D     T+N KIR 
Sbjct: 605 TENFGGKWPFWLSPRQVMVVPVGPTCDEYAQKVRQQFHDAKFTVDIDLDPGCTLNKKIRN 664

Query: 598 HSIKKIPIIIICGDKEASERSIGIR 622
             + +   I++ G+KE +  ++ IR
Sbjct: 665 AQLAQYNFILVIGEKEKASGTVNIR 689


>gi|152967010|ref|YP_001362794.1| threonyl-tRNA synthetase [Kineococcus radiotolerans SRS30216]
 gi|151361527|gb|ABS04530.1| threonyl-tRNA synthetase [Kineococcus radiotolerans SRS30216]
          Length = 656

 Score =  433 bits (1114), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 236/626 (37%), Positives = 359/626 (57%), Gaps = 39/626 (6%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSCAH 79
           A+G+   E  +    +  V   +NG++ DLS  + EG  +E +       LAV+RHS AH
Sbjct: 17  ASGTTAGELFAED--RDVVVARVNGELRDLSHVLAEGDEVEGVPISSEDGLAVLRHSAAH 74

Query: 80  IMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQ 139
           +MA+AV+  +PE ++ IGP I DGFY+DFD E+PF+ ++L  +EK MQ I+     F+++
Sbjct: 75  VMAQAVKQHFPEARLGIGPPIRDGFYFDFDVERPFTPEDLKVVEKTMQRIVKEGQRFVRR 134

Query: 140 YLSHEKARELFESKKEAYKVEIL----------ESIPAK---ENVTLYRQGE------WF 180
            +S ++AR   E   E YK+E++          E   A+     +T+Y   +      + 
Sbjct: 135 EVSDDEARA--EMADEPYKLELIGLKSSAGDAAEGASAEVGEGGLTIYDNLKRDDAVAFR 192

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ +T  V   F L++ A AYWRG    P L RIYGTAW ++ EL  Y   + E
Sbjct: 193 DLCRGPHLPTTRLVGIGFSLLRSAAAYWRGSEKNPQLQRIYGTAWPSKDELKAYQERVAE 252

Query: 241 SEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQ 298
           +E+RDHR+L  E+DLF   ++ GSG++ +H KG  + + +  Y+RR+ I++ +  + TP 
Sbjct: 253 AERRDHRRLGAELDLFSFPDEIGSGLVVFHPKGGVVKREMEDYVRRRHIEEGFSYVGTPH 312

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L++ SGH   Y   MF     +++      + LK MNCP H  +F    +SYREL
Sbjct: 313 ISKGGLFETSGHLPYYEDTMFPGMELENS-----KYYLKAMNCPMHNLIFRSRGRSYREL 367

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R  EFGSVYR E SG +HGL RVRG TQDD+H + T+EQ   E   + + ++ + KDF
Sbjct: 368 PLRFFEFGSVYRYEKSGVVHGLTRVRGLTQDDSHSYVTQEQAPGEIKHLLDFVLGLLKDF 427

Query: 419 GFEKIMVKLSTR--PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           G +   ++LSTR   EK +GSD  W  A  +++      + +  D +      G  AFYG
Sbjct: 428 GLDDYYLELSTRGDSEKFIGSDEEWARATEVLE---TAARETGLDLVAD---PGGAAFYG 481

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK     KDAIGR WQ  TIQ DFN P+RF   Y  +   K  PVMIH A FGS+ERF G
Sbjct: 482 PKISVQAKDAIGRTWQMSTIQYDFNQPARFELEYTAADGTKQRPVMIHSAKFGSLERFFG 541

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +++E++ G  P WL+P+Q +   +  + V + Q++A  L++  + +E D  ++ +  KIR
Sbjct: 542 VLVEHYAGAFPPWLAPVQVVGIPVADAHVPHLQDVAAALRAAGVRVEVDDTDDRMPKKIR 601

Query: 597 EHSIKKIPIIIICGDKEASERSIGIR 622
             + +KIP ++I G ++    ++  R
Sbjct: 602 TWTKQKIPFLLIAGAEDVENGAVSFR 627


>gi|297626431|ref|YP_003688194.1| Threonyl-tRNA synthetase (Threonine--tRNA ligase) (ThrRS)
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
 gi|296922196|emb|CBL56764.1| Threonyl-tRNA synthetase (Threonine--tRNA ligase) (ThrRS)
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
          Length = 680

 Score =  433 bits (1113), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 238/638 (37%), Positives = 352/638 (55%), Gaps = 49/638 (7%)

Query: 36  KKAVAVAINGKVCDLSDPVREGSI-EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           K  VA+ +NG+  DL+  +  G + E ++      L+++RHS AH+ A+A+Q I+P+ ++
Sbjct: 32  KSIVAMHLNGETVDLATQLSAGDVVEPVSMTSDEGLSIVRHSAAHVTAQALQDIFPQARL 91

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            IGP I DGFYYDF  E P S+D+L Q+EKKMQ II +   F+++ +S E+A  L E   
Sbjct: 92  GIGPPITDGFYYDFQTE-PLSADDLKQVEKKMQAIIKQRQRFVRRVVSEEEA--LREEAN 148

Query: 155 EAYKVEIL------------------ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKK 196
           E YK+E++                    +   +NVT      W DLCRGPHV +TG +K 
Sbjct: 149 EPYKLELIADKGHPSDDDNSSVEVGGNELTMYDNVTRNGTVAWRDLCRGPHVPNTGYIKA 208

Query: 197 FFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLF 256
              L K + AYWRGD +   L R+YGTAW T+ +L  Y   + E+ KRDHRKL +E+DLF
Sbjct: 209 V-ALTKTSAAYWRGDQHNAQLQRVYGTAWATRDDLKAYQTRMAEAAKRDHRKLGQELDLF 267

Query: 257 HIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSY 314
              E+ G G++ +H KG  +   + SY+ +R I   ++ ++TP +    L+  SGH   Y
Sbjct: 268 SFPEEIGPGLVVFHPKGGILRHEIESYITKRHIDAGFDLVDTPIISKGDLFHTSGHLPYY 327

Query: 315 RANMFAVKCADDTIK-------DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGS 367
              MF     D+ +          + + LK MNCP H  +F    +SYRELP+R  E G 
Sbjct: 328 ADTMFPPMTVDEEVDAEGNVRHQGQEYYLKAMNCPMHNLIFRSRGRSYRELPLRFYELGR 387

Query: 368 VYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKL 427
            +R E SG + GL R+RGFTQDD+H +CT EQ  +E   +    +SI +DFG ++  ++L
Sbjct: 388 DFRYEKSGVVQGLTRMRGFTQDDSHTYCTPEQAGDEIKMLLGFFLSILRDFGLKEFYLEL 447

Query: 428 STR---PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL----GEGAFYGPKFE 480
           STR     K +GSD  W+ A  I++   ++          TG+ L    G  AFYGPK  
Sbjct: 448 STRDASSSKFIGSDEDWEAATEILRVAAES----------TGLELVADPGGAAFYGPKVS 497

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
              KDA+GR WQ  T+Q DFN P+RF   Y  +      PVMIH A  GS+ERFIG++ E
Sbjct: 498 VQAKDALGRTWQMSTVQYDFNQPARFGLEYTAADGSHQQPVMIHCAKLGSVERFIGVLTE 557

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           ++ G  P WLSP+Q +   +      Y   IA  L+   + +E D  ++ +  KIR  + 
Sbjct: 558 HYAGAFPAWLSPVQVVGIPVAGEFNGYLDTIATRLREKGVRVEVDESDDRMQKKIRNATR 617

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           +K+P ++I G+K+   +++  R    +    V + DAI
Sbjct: 618 QKVPFMLIAGEKDREAQAVSFRFRDGSQLNGVPIDDAI 655


>gi|225574947|ref|ZP_03783557.1| hypothetical protein RUMHYD_03026 [Blautia hydrogenotrophica DSM
           10507]
 gi|225037794|gb|EEG48040.1| hypothetical protein RUMHYD_03026 [Blautia hydrogenotrophica DSM
           10507]
          Length = 667

 Score =  433 bits (1113), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 232/629 (36%), Positives = 370/629 (58%), Gaps = 28/629 (4%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T  DGS+K +  + T  ++A  IS  LA+ A A  ++G++ DL   + ++ ++ I+T  
Sbjct: 19  ITLKDGSVKEYSDNKTIYEIAYDISEGLARAACAGEVDGQIKDLRTVLNKDCTLNILTAN 78

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D + LA +RH+ +H++AEAV+ ++P  +VAIGP I+ GFYYDF+ E PFS ++L +IE++
Sbjct: 79  DEKGLAALRHTASHVLAEAVKRLYPHAKVAIGPSIDTGFYYDFECE-PFSQEDLDKIEQE 137

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M++I+   +   +  +  E+A   F+ K+E YKVE++E +P    ++ Y QG + DLC G
Sbjct: 138 MKKIVKEGAKIERYTMPREEAIAYFKEKEEPYKVELIEDLPEDAEISFYSQGGFTDLCAG 197

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PH+ ST  VK F KL+  +GAYWRGD  R ML+R+YGTA+  + EL  YL  LEE++KRD
Sbjct: 198 PHLMSTKGVKAF-KLLSSSGAYWRGDEKRQMLTRVYGTAFGKKDELKAYLEQLEEAKKRD 256

Query: 246 HRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKDD---YEEINTPQVLD 301
           H KL REM+LF   +  G G+     KG  I + L  ++   ++D+   Y    TP +  
Sbjct: 257 HNKLGREMELFTTVDVIGQGLPLLMPKGVIILKELQRWIE-DLEDNEWGYIRTKTPLMAK 315

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             L++ SGHWD Y+  MF +    D  KD   +AL+PM CP    V+     SYRELP+R
Sbjct: 316 SDLYKISGHWDHYKDGMFVL---GDEEKDKEVYALRPMTCPFQYYVYKASQHSYRELPLR 372

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM---FNECLKIHNLIISIYKDF 418
            +E  +++RNE SG +HGL RVR FT  +AH+    +Q+   F +C+++   +++     
Sbjct: 373 YSETSTLFRNEDSGEMHGLTRVRQFTITEAHLITRPDQIDEEFKKCVQLAKFVLTT---L 429

Query: 419 GFEK-IMVKLS----TRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           G +  +  +LS       EK +G    W+ ++N M+ +L+ ++      ++     GE A
Sbjct: 430 GLQDDVTYRLSKWDPNNTEKYIGDAQYWETSQNKMRELLNELE------LDFVEADGEAA 483

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +   K+  G++    TIQ+DF L  +F+ +Y++ + EK  P +IHR   G  ER
Sbjct: 484 FYGPKLDIQAKNVYGKEDTMITIQLDFALAEQFHMYYIDENGEKKMPFIIHRTSMGCYER 543

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
            +  +IE + G  P WL P Q  V  I+   ++YA ++   LK++ +    D R+E I Y
Sbjct: 544 TLAWLIEKYAGLFPTWLCPEQVRVLPISEKYLDYANQVNAQLKANGIRSSVDDRSEKIGY 603

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIR 622
           KIRE  ++K+P +++ G KE  E  + +R
Sbjct: 604 KIRESRLQKVPYMLVVGAKEEQEEKVSVR 632


>gi|55741823|ref|NP_001006977.1| threonyl-tRNA synthetase, cytoplasmic [Rattus norvegicus]
 gi|59896667|sp|Q5XHY5|SYTC_RAT RecName: Full=Threonyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|53734298|gb|AAH83914.1| Threonyl-tRNA synthetase [Rattus norvegicus]
          Length = 695

 Score =  432 bits (1111), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 244/625 (39%), Positives = 359/625 (57%), Gaps = 25/625 (4%)

Query: 5   IKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           IK+T PDG  +       T   +A  IS+ LA   V   +N  V DL  P+  + ++E++
Sbjct: 55  IKVTLPDGKQVDAESWKTTPYQIACGISQGLADNTVVAKVNKVVWDLDRPLETDCTLELL 114

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQ 121
             ED  + AV  HS AHIM EA++ ++    +  GP IE+GFYYD + +E   SS++ + 
Sbjct: 115 KFEDEEAQAVYWHSSAHIMGEAMERVYGGC-LCYGPPIENGFYYDMYLEEGGVSSNDFSS 173

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +E   ++II     F +  +  E   E+F+  K  +K  IL         T+YR G   D
Sbjct: 174 LETLCKKIIKEKQTFERLEVKKETLLEMFKYNK--FKCRILNEKVNTPTTTVYRCGPLID 231

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHVR TG++K   K+ K +  YW G ++   L RIYG ++   + L ++  F EE+
Sbjct: 232 LCRGPHVRHTGKIKTL-KIHKNSSTYWEGKADMETLQRIYGISFPDPKLLKEWEKFQEEA 290

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVL 300
           + RDHRK+ R+ +L+   E   G  F+  KG  I+ TL+ ++R +  K  ++E+ TP + 
Sbjct: 291 KNRDHRKIGRDQELYFFHELSPGSCFFLPKGAYIYNTLMEFIRSEYRKRGFQEVVTPNIF 350

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  LW  SGHW  Y  NMF+ +   +       FALKPMNCPGH  +F+H  +S+RELP+
Sbjct: 351 NSRLWMTSGHWQHYSENMFSFEVEKEQ------FALKPMNCPGHCLMFDHRPRSWRELPL 404

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLA+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E     + + ++Y  FGF
Sbjct: 405 RLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSVFGF 464

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
               + LSTRPEK +G   +W+ AE  ++  L+      +  +N     G+GAFYGPK +
Sbjct: 465 -SFKLNLSTRPEKFLGDIEIWNQAEKQLENSLNEFGEKWE--LNP----GDGAFYGPKID 517

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH--SEKCHPVMIHRAVFGSIERFIGIM 538
             +KDAIGR  QC TIQ+DF LP RFN  YV SH   +K  PV++HRA+ GS+ER I I+
Sbjct: 518 IQIKDAIGRYHQCATIQLDFQLPIRFNLTYV-SHDGDDKKRPVIVHRAILGSVERMIAIL 576

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIRE 597
            EN+ G  P WLSP Q +V  +  +  EYAQ++          ++ D     T+N KIR 
Sbjct: 577 TENYGGKWPFWLSPRQVMVVPVGPTCDEYAQKVRQEFHDAKFMVDIDLDPGCTLNKKIRN 636

Query: 598 HSIKKIPIIIICGDKEASERSIGIR 622
             + +   I++ G+KE +  ++ IR
Sbjct: 637 AQLAQYNFILVVGEKEKASGTVNIR 661


>gi|291460058|ref|ZP_06599448.1| threonine--tRNA ligase [Oribacterium sp. oral taxon 078 str. F0262]
 gi|291417399|gb|EFE91118.1| threonine--tRNA ligase [Oribacterium sp. oral taxon 078 str. F0262]
          Length = 626

 Score =  432 bits (1111), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 236/609 (38%), Positives = 348/609 (57%), Gaps = 50/609 (8%)

Query: 70  LAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQE 128
           L+V RHS AHI+A+AV  ++  +VQ AIGP +EDG YYDF   +P + +   +IE KM+E
Sbjct: 7   LSVYRHSLAHILAKAVIELYGKDVQYAIGPEVEDGCYYDFVFPRPVTEENFKEIEDKMRE 66

Query: 129 IIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF-DLCRGPH 187
           II R  P+ ++ LS ++A ELF  K + +K EI+E +P    ++ Y  G+ F DLCRGPH
Sbjct: 67  IIRRKEPWTRRELSRKEALELF--KDQRFKKEIIEDLPEDAVISAYYTGDDFVDLCRGPH 124

Query: 188 VRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDH 246
           V ++ ++    F++   +GAYWRGD +R  L RIY  A+  ++ L  +L F++E+++RDH
Sbjct: 125 VENSKELLNAAFQIKSTSGAYWRGDEHRDQLQRIYLYAFPDKEALKAHLKFVKEAQERDH 184

Query: 247 RKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLW 305
           +KL  +++LF   E   G+ +W  +GWK++Q L+ Y R  + +  Y EI  P + ++ LW
Sbjct: 185 KKLGAQLELFLFDETAPGMPYWLPRGWKMYQALLKYSREVQERHGYREIAAPLINNKKLW 244

Query: 306 QQSGHWDSYRANMFAVKCADDTIK----------------------------------DL 331
             SGHW  Y  NMF V      +K                                   +
Sbjct: 245 LISGHWAHYINNMFMVPGVSGWLKADAEIPGILENLAEQGEEPKNVKIQAGSVLYNRERM 304

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
            T A KPMNCP  +  +    +SYRELP+R +E+  ++R E SG ++GL RV+ F QDD 
Sbjct: 305 DTMAAKPMNCPNAMLTYKRKNRSYRELPIRYSEYDVLHRKEKSGQMNGLFRVQEFRQDDD 364

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
           H F  + Q+ +E   I ++   IY  FG      +LSTRPE  +G   +WD AE  +K +
Sbjct: 365 HTFVMESQIEDEIKDIISIADEIYSTFGV-SYRAELSTRPEDFMGDIEVWDRAEAALKRI 423

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
           L          IN G    +GAFYGPK +  +KDA+GR+WQCGTIQ+DF LP  F   Y 
Sbjct: 424 LTNKYGEGGFEINEG----DGAFYGPKIDLQIKDALGREWQCGTIQLDFQLPHNFGLSYQ 479

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
            +      PV+IHRA++GS+ERFIGI+IENFKG  P WLS  Q  +  I +    YA+++
Sbjct: 480 TAEGVAAMPVVIHRAIYGSLERFIGIIIENFKGVFPFWLSSEQVGIVPIRTEHNAYAKKV 539

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
            +LL+ H + +E D+    +  KI+++   K P I++ GD+EA+E ++ I   GS     
Sbjct: 540 FSLLQKHGIRVEADYSESNMKEKIKKYKNFKDPYILVLGDREAAENTVSINMRGSNRQ-- 597

Query: 632 VSLLDAIPI 640
              L+ IPI
Sbjct: 598 ---LNNIPI 603


>gi|300173545|ref|YP_003772711.1| threonyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811]
 gi|299887924|emb|CBL91892.1| Threonyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811]
          Length = 655

 Score =  432 bits (1111), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 231/647 (35%), Positives = 376/647 (58%), Gaps = 26/647 (4%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEI 61
           S + LTFPDG++K FP      +VA+SIS+SLAKK+V+  +N     ++D + E G+ ++
Sbjct: 2   SALNLTFPDGAVKVFPDGTKPIEVAQSISKSLAKKSVSAKLNDAYVGMNDILPESGNFQL 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSI--WPEVQVAIGPIIEDGFYYDFDKE--QPFSSD 117
           IT  D  +L+++RH+ +H++A+A++ +  +  +   +GP I++GFYYD D       S +
Sbjct: 62  ITTSDTEALSLLRHATSHLLAQALKRMPKFANMHFGVGPFIDNGFYYDTDNGAGNQVSVE 121

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +  +IE  M +I+  D P + + ++  +A E+F +  + YK+ ++  +P  E +T+  QG
Sbjct: 122 DFPEIEAMMHKIVKEDLPIISRQITRAEALEMFAA--DPYKLALITDLPEDEILTIAIQG 179

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           +  +L +G  V STG +K F KL  VAGAYWRG S+ PM+ RIYG +   Q ++   +  
Sbjct: 180 DHIELDKGGLVPSTGWIKHF-KLTSVAGAYWRGKSSNPMMQRIYGISEWKQADVDAEVTR 238

Query: 238 LEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEIN 295
            EE+++RDHR + R++DLF  +++ GSG+  W   G  I + +  Y+  K + + Y+ + 
Sbjct: 239 REEAKERDHRTIGRDLDLFFTSQEVGSGLPVWLPNGATIRRQVERYITDKELANGYQHVY 298

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP + + +L++ SGHWD YR +MF        + D     L+PMNCP H+ VF H  +SY
Sbjct: 299 TPVLSNLNLYKTSGHWDHYREDMFPPM----DMGDGEFLELRPMNCPSHIMVFKHKPRSY 354

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP+R+AE G ++R E SG+L GL RVR  T +D H F   E++  E   I  +++++Y
Sbjct: 355 RELPIRIAELGMMHRYEKSGALTGLSRVREMTLNDGHTFVEPEKIEEEFKSILTMMMAVY 414

Query: 416 KDFGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
           +DF       +LS R     EK    D +W+ ++  +K  +D +K      ++     GE
Sbjct: 415 RDFNITDYRFRLSYRDPKNTEKYFDDDEMWEKSQAQLKSAMDDLK------LDYYEAEGE 468

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH-PVMIHRAVFGS 530
            AFYGPK +   K A+G +    TIQ+DF LP RF+  Y+ +  +  H PVM+HR + G+
Sbjct: 469 AAFYGPKLDVQTKTALGNEETMSTIQLDFLLPERFDLTYIGADGQDNHRPVMLHRGIVGT 528

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNE 589
           +ERF   +IE +KG  P WLSP+Q  +  +   A  EYA  +   L++  L    + +  
Sbjct: 529 MERFTAYLIEMYKGAFPTWLSPLQVQIIPVNLGAHGEYADGVQKKLQAVGLRANVETKEA 588

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
            + Y IRE    KIP  ++ GD E   +++ +R++G   TQ +S +D
Sbjct: 589 KMGYLIREAQTNKIPYTLVLGDSEVDAQTVTVRKYGEEKTQTMSFID 635


>gi|315651290|ref|ZP_07904318.1| threonine--tRNA ligase [Eubacterium saburreum DSM 3986]
 gi|315486442|gb|EFU76796.1| threonine--tRNA ligase [Eubacterium saburreum DSM 3986]
          Length = 651

 Score =  432 bits (1111), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 237/656 (36%), Positives = 372/656 (56%), Gaps = 34/656 (5%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           +K+T  DGS+K +    +  D+A  IS  LA+  VA  +NG +CDL D +  +  + +I 
Sbjct: 1   MKITLKDGSVKEYESKRSIIDIARDISEGLARSVVAGEVNGVICDLRDEIESDCELNLIA 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D + L+VIRH+ +H++A+AV+ I+P+ ++AIGP I +GFYYDF+ E PFS D+L ++E
Sbjct: 61  LKDEKGLSVIRHTASHVLAQAVKRIFPQAKLAIGPSIAEGFYYDFEHE-PFSRDDLDKLE 119

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M++II       +  L  E+A +  E K E YKVE++  +P  E ++ Y+QG++ DLC
Sbjct: 120 AEMKKIIKEGEAIERFELPREEAIKFMEEKNEPYKVELIRDLPQDEKISFYKQGDFTDLC 179

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH++ T  +K F KL+  + AYWRGDSN+  L RIYGTA+NT++EL  YL  LE+ + 
Sbjct: 180 AGPHLQRTKDIKAF-KLVSSSMAYWRGDSNKARLQRIYGTAYNTKEELEAYLKHLEDIKL 238

Query: 244 RDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKDD---YEEINTPQV 299
           RDH KL REM+LF   +  G G+     KG K+ Q L  ++   ++D+   Y    TP +
Sbjct: 239 RDHNKLGREMELFTTVDVVGQGLPLMLPKGTKMIQKLQRWIE-DLEDNEWGYVRTKTPLM 297

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHWD Y+  MF +    D   D    AL+PM CP    V+ +  KSYR+LP
Sbjct: 298 AKSDLYKISGHWDHYQDGMFIL---GDPQHDGEILALRPMTCPFQYYVYKNTQKSYRDLP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
            R+ E  +++RNE SG +HGL RVR FT  + H     +Q   E     NL I + +  G
Sbjct: 355 YRMGETSTLFRNEDSGEMHGLTRVRQFTISEGHNVIRPDQAEEELQNCLNLAIYVLETLG 414

Query: 420 F-EKIMVKLS----TRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL----G 470
             + +  +LS       EK +G +A W+  +  ++ +L          +  G+      G
Sbjct: 415 LRDDVTFRLSKWDKNNKEKYLGDEAYWEGTQAALRNIL----------VEKGLPFTEADG 464

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           E AFYGPK +   K+  G++    TIQ+D  +   F+ +Y++ +  K  P ++HR   G 
Sbjct: 465 EAAFYGPKIDIQAKNVYGKEDTMITIQLDAAIAENFDLYYIDQNGAKVRPYIVHRTSLGC 524

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
            ER +  +IE + G  P WL P Q  +  I+    +YA  +   LK + +    D R E 
Sbjct: 525 YERTLAWLIEKYAGKFPTWLCPEQVRILPISDKYADYANSVLKELKKNGVDATVDTRTEK 584

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIR-RF-GSTTTQKVSLLDAIPILTKE 644
           I +KIR+  + ++P +++ G+KE +E S+ +R RF G   ++K+S  D + ++ KE
Sbjct: 585 IGFKIRDARLSRLPYMLVVGEKEEAEGSVSVRSRFAGDEGSKKLS--DFVDMICKE 638


>gi|149027310|gb|EDL82977.1| threonyl-tRNA synthetase, isoform CRA_a [Rattus norvegicus]
          Length = 722

 Score =  432 bits (1111), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 244/625 (39%), Positives = 359/625 (57%), Gaps = 25/625 (4%)

Query: 5   IKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           IK+T PDG  +       T   +A  IS+ LA   V   +N  V DL  P+  + ++E++
Sbjct: 82  IKVTLPDGKQVDAESWKTTPYQIACGISQGLADNTVVAKVNKVVWDLDRPLETDCTLELL 141

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQ 121
             ED  + AV  HS AHIM EA++ ++    +  GP IE+GFYYD + +E   SS++ + 
Sbjct: 142 KFEDEEAQAVYWHSSAHIMGEAMERVYGGC-LCYGPPIENGFYYDMYLEEGGVSSNDFSS 200

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +E   ++II     F +  +  E   E+F+  K  +K  IL         T+YR G   D
Sbjct: 201 LETLCKKIIKEKQTFERLEVKKETLLEMFKYNK--FKCRILNEKVNTPTTTVYRCGPLID 258

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHVR TG++K   K+ K +  YW G ++   L RIYG ++   + L ++  F EE+
Sbjct: 259 LCRGPHVRHTGKIKTL-KIHKNSSTYWEGKADMETLQRIYGISFPDPKLLKEWEKFQEEA 317

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVL 300
           + RDHRK+ R+ +L+   E   G  F+  KG  I+ TL+ ++R +  K  ++E+ TP + 
Sbjct: 318 KNRDHRKIGRDQELYFFHELSPGSCFFLPKGAYIYNTLMEFIRSEYRKRGFQEVVTPNIF 377

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  LW  SGHW  Y  NMF+ +   +       FALKPMNCPGH  +F+H  +S+RELP+
Sbjct: 378 NSRLWMTSGHWQHYSENMFSFEVEKEQ------FALKPMNCPGHCLMFDHRPRSWRELPL 431

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLA+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E     + + ++Y  FGF
Sbjct: 432 RLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSVFGF 491

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
               + LSTRPEK +G   +W+ AE  ++  L+      +  +N     G+GAFYGPK +
Sbjct: 492 -SFKLNLSTRPEKFLGDIEIWNQAEKQLENSLNEFGEKWE--LNP----GDGAFYGPKID 544

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH--SEKCHPVMIHRAVFGSIERFIGIM 538
             +KDAIGR  QC TIQ+DF LP RFN  YV SH   +K  PV++HRA+ GS+ER I I+
Sbjct: 545 IQIKDAIGRYHQCATIQLDFQLPIRFNLTYV-SHDGDDKKRPVIVHRAILGSVERMIAIL 603

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIRE 597
            EN+ G  P WLSP Q +V  +  +  EYAQ++          ++ D     T+N KIR 
Sbjct: 604 TENYGGKWPFWLSPRQVMVVPVGPTCDEYAQKVRQEFHDAKFMVDIDLDPGCTLNKKIRN 663

Query: 598 HSIKKIPIIIICGDKEASERSIGIR 622
             + +   I++ G+KE +  ++ IR
Sbjct: 664 AQLAQYNFILVVGEKEKASGTVNIR 688


>gi|294655282|ref|XP_002770111.1| DEHA2B10252p [Debaryomyces hansenii CBS767]
 gi|199429831|emb|CAR65481.1| DEHA2B10252p [Debaryomyces hansenii]
          Length = 733

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 236/632 (37%), Positives = 370/632 (58%), Gaps = 30/632 (4%)

Query: 5   IKLTFPDGSIKNFPVHATGS-DVAESISRSLAKKAVAVAING-KVCDLSDPVREGSIEI- 61
           I++T  DGS+K    + T   ++A SI +S A++ V   +NG ++ DL  P+ EG +++ 
Sbjct: 81  IQITLKDGSVKEGTSYETSPMEIATSIGKSFAERQVISKVNGEQLWDLERPL-EGDVKLD 139

Query: 62  -ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF---DKEQPFSSD 117
            +  E P   +V  HS AH++ E+ +  +    ++ GP  +DGF+YD    + E   +  
Sbjct: 140 FLDFEHPEGKSVFWHSSAHVLGESCECHYG-CHLSHGPPTDDGFFYDMSINNGEGAVTQA 198

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVE-ILESIPAKENVTLYRQ 176
           +   +EK   + I     F++  ++ E   ++F   K  YKV+ I + IP   + T+YR 
Sbjct: 199 DFGNLEKVSTKAIKEKQKFVRLEMTKEDLLKMFSYNK--YKVQFISDKIPDGTSTTVYRC 256

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           G   DLC GPH+  TG++K F K++K + +Y+ GD+    L R+YG ++  ++ + ++L 
Sbjct: 257 GPLIDLCVGPHIPHTGKIKAF-KVLKNSSSYFLGDAANDSLQRVYGISFPDKKLMDEHLK 315

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
           FL+E+ +RDHR++ +E +LF   E   G  FW   G +I+ TL   MR++ +   Y+E+ 
Sbjct: 316 FLKEASERDHRRIGKEQELFTFNEMSPGSAFWLPHGTRIYNTLTDLMRKEYRQRGYDEVI 375

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP + +  LW+ SGHW +Y+ NMF+ +   +T      F LKPMNCPGH  +F    +SY
Sbjct: 376 TPNMYNSKLWETSGHWGNYKENMFSFEVEKET------FGLKPMNCPGHCLMFKSRERSY 429

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP R+A+FG ++RNE SG+L GL RVR F QDDAH+FCT+EQ+ +E   + + +  IY
Sbjct: 430 RELPWRVADFGVIHRNELSGALSGLTRVRRFQQDDAHIFCTQEQIESEIGGVFDFLQKIY 489

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
             FGFE   ++LSTRPEK VG    W++AE  ++  L+T     +  +N     G+GAFY
Sbjct: 490 GVFGFE-FKMELSTRPEKYVGDIETWNNAEANLENALNTFLGKGKWELNP----GDGAFY 544

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH----PVMIHRAVFGSI 531
           GPK + ++ DA+ R +QC TIQ+DF LP+RF   Y    ++K +    PVMIHRA+ GS+
Sbjct: 545 GPKIDIMISDALKRWFQCATIQLDFQLPNRFELEYKAETNDKSNTIGRPVMIHRAILGSV 604

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLL-KSHHLSIETDFRNET 590
           ER   I+ E++KG  P WLSP Q +V  +     EYAQ + N L K +    + D    T
Sbjct: 605 ERMTAILTEHYKGKWPFWLSPRQILVVPVGVKYFEYAQSLQNKLNKEYGFYADVDVSGNT 664

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           +  K+R   + K   I I G++E  ++ + +R
Sbjct: 665 LQKKVRTGQVYKYNFIFIVGEQEQEQQGVNVR 696


>gi|194223978|ref|XP_001498225.2| PREDICTED: threonyl-tRNA synthetase [Equus caballus]
          Length = 722

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 246/626 (39%), Positives = 358/626 (57%), Gaps = 27/626 (4%)

Query: 5   IKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEII 62
           IK+T PDG  +       T   +A  IS+ LA   V   +N  V DL  P+ E  ++E++
Sbjct: 82  IKVTLPDGKQVDAESWKTTAYQIACGISQGLADNTVIAKVNKAVWDLDRPLEEDCTLELL 141

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQ 121
             ED  + AV  HS AHIM EA++ ++    +  GP IE+GFYYD +  E   SS++ + 
Sbjct: 142 KFEDEEAQAVYWHSSAHIMGEAMERVYGGC-LCYGPPIENGFYYDMYLDEGGVSSNDFSS 200

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +E   ++II     F +  +  E   E+F+  K  +K  IL         T+YR G   D
Sbjct: 201 LEGLCKKIIKEKQAFERLEVKKETLLEMFKYNK--FKCRILNEKVNTPTTTVYRCGPLID 258

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHVR TG++K   K+ K +  YW G ++   L RIYG ++   + L ++  F EE+
Sbjct: 259 LCRGPHVRHTGKIKTL-KIHKNSSTYWEGKADMETLQRIYGISFPDPKMLKEWEKFQEEA 317

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVL 300
           + RDHRK+ R+ +L+   E   G  F+  KG  I+ TLI ++R +  K  ++E+ TP + 
Sbjct: 318 KNRDHRKIGRDQELYFFHELSPGSCFFLPKGAYIYNTLIEFIRSEYRKRGFQEVVTPNIY 377

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  LW  SGHW  Y  NMF+ +   +       FALKPMNCPGH  +F+H  +S+RELP+
Sbjct: 378 NSRLWMTSGHWQHYSENMFSFEVEKEL------FALKPMNCPGHCLMFDHRPRSWRELPL 431

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+A+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E     + + ++Y  FGF
Sbjct: 432 RMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAIEQIEDEIKGCLDFLRTVYSVFGF 491

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL-LGEGAFYGPKF 479
               + LSTRPEK +G   +W+ AE         ++NS  +     VL  G+GAFYGPK 
Sbjct: 492 -SFKLNLSTRPEKFLGDIEVWNQAEK-------QLENSLNEFGEKWVLNPGDGAFYGPKI 543

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH--SEKCHPVMIHRAVFGSIERFIGI 537
           +  +KDAIGR  QC TIQ+DF LP RFN  +V SH   +K  PV++HRA+ GS+ER I I
Sbjct: 544 DIQIKDAIGRYHQCATIQLDFQLPIRFNLTFV-SHDGDDKKRPVIVHRAILGSVERMIAI 602

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIR 596
           + EN+ G  P WLSP Q +V  +  +  EYAQ++          ++ D     T+N KIR
Sbjct: 603 LTENYGGKWPFWLSPRQVMVVPVGPTCDEYAQKVRQQFHDAKFMVDVDLDPGCTLNKKIR 662

Query: 597 EHSIKKIPIIIICGDKEASERSIGIR 622
              + +   I++ G+KE +  ++ IR
Sbjct: 663 NAQLAQYNFILVVGEKEKTSGTVNIR 688


>gi|302682704|ref|XP_003031033.1| hypothetical protein SCHCODRAFT_77271 [Schizophyllum commune H4-8]
 gi|300104725|gb|EFI96130.1| hypothetical protein SCHCODRAFT_77271 [Schizophyllum commune H4-8]
          Length = 728

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 236/649 (36%), Positives = 368/649 (56%), Gaps = 25/649 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGS-DVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           +I +T PDG+ +      T    +A  IS+ LA K V   ++G++ DL  P+ +   +E+
Sbjct: 82  EITITLPDGAERKGTSWETSPMSIALEISKGLADKVVIAKVDGQLWDLERPLEKSCKLEL 141

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELA 120
           +  + P    V  HS AH++ EA +  +    + +GP  ++GF+Y+   +++P    +  
Sbjct: 142 LDFDHPEGKRVFWHSSAHVLGEAAERHY-GCHLCLGPPTDEGFFYEMAIEDRPVQPSDYP 200

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES-IPAKENVTLYRQGEW 179
            +EK  ++ I     F +  +S E   ++F   K  YK  ++++ IP  E+ T+YR G  
Sbjct: 201 ALEKVSEKAIKEKQKFERLVVSKENLLKMFNYNK--YKQYLIQTKIPDGESTTVYRCGPM 258

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLC GPH+  TG++K    + K + +Y+ GD     L RIYG ++  +++L ++  FL 
Sbjct: 259 IDLCVGPHIPHTGRIKAMM-VTKSSASYFLGDQANDTLQRIYGISFPDKKQLAEHKAFLA 317

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQ 298
           E+ KRDHRK+ RE +LF   +   G  F+   G +I+ TLI  MR +  K  Y+E+ +P 
Sbjct: 318 EAAKRDHRKIGREQELFFFHDLSPGSCFFLPHGTRIYNTLIELMRSEYFKRGYQEVISPN 377

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           + +  LW+ SGHW++Y+ +MF +    D       +ALKPMNCPGH  +F+   +SYREL
Sbjct: 378 MYNAKLWETSGHWENYKDDMFTLDIEKDN------WALKPMNCPGHCLIFDSRDRSYREL 431

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG ++RNE SG+L GL RVR F QDD H+FC   Q+  E   + + +  +Y  F
Sbjct: 432 PIRMAEFGIIHRNEASGALSGLTRVRRFVQDDTHIFCMPSQVEAEMAGLFDFMQHVYGIF 491

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE   ++LSTRPEK +G    W+ AE+ +K  L+       + +N G    +GAFYGPK
Sbjct: 492 GFE-FHLELSTRPEKYLGEVETWNAAEDQLKQALEKYYPGKWE-LNPG----DGAFYGPK 545

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +  ++DA+ R +QC TIQ+DF LP RFN  Y +++ E   P++IHRA+ GSIERF+ I 
Sbjct: 546 IDITIRDALKRAYQCATIQLDFQLPQRFNLKYRSNNEEVQRPIIIHRAILGSIERFVAIA 605

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
            E+F G  P WLSP Q +V  + +   EYA E+A  L   +L  E D  + T+  KIR  
Sbjct: 606 TEHFAGKWPFWLSPRQVLVIPVAAPYKEYASEVAETLSKANLYAEVDNSDNTLQKKIRNG 665

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQ----KVSLLDAIPILTK 643
            I +   I++ G+ E   +S+ +R      T+     + L D +  L K
Sbjct: 666 EIAQYNFILVVGETELESKSVNVRNRDDVGTKARSATIPLADIVDKLVK 714


>gi|260903858|ref|ZP_05912180.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Brevibacterium
           linens BL2]
          Length = 668

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 236/643 (36%), Positives = 358/643 (55%), Gaps = 49/643 (7%)

Query: 33  SLAKKAVAVAINGKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE 91
           S  +  VA+ ++G+  DLS  +  G  I  IT + P  L ++RHS AH+ A+AVQ ++P+
Sbjct: 25  STDRTVVAMWLDGQPVDLSRELAAGDQIAPITIDSPAGLDILRHSAAHVTAQAVQDLFPD 84

Query: 92  VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFE 151
            ++ IGP I DG+Y+DFD  +PF+ ++L  I+KK  +I+     F +  ++ ++A+    
Sbjct: 85  AKLGIGPYITDGYYFDFDVAEPFTPEDLKAIQKKAAQIVKAGQTFNRVVVTEDEAKARMA 144

Query: 152 SKKEAYKVEILESIPAKEN-----------VTLY----RQGE--WFDLCRGPHVRSTGQV 194
           +  E YK+E++    A  +           +T+Y    R+GE  W DLCRGPH+ ST  +
Sbjct: 145 N--EPYKLELINDKGAGSDDSASVEVGAGELTVYENLDRKGEIVWQDLCRGPHLPSTKLI 202

Query: 195 KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMD 254
              F + + + AYWRGD     L R+YGTAW ++++L  +   L E+E+RDHRKL  E+D
Sbjct: 203 GNGFAVTRSSAAYWRGDQANASLQRVYGTAWASKEDLKAHQDRLAEAERRDHRKLGAELD 262

Query: 255 LFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWD 312
           LF   E+ GSG+  +H KG  I + +  Y+R R I++ +E + TP +  + L+  SGH  
Sbjct: 263 LFSFPEELGSGLPVFHPKGGVIKREMEDYVRARHIEEGFEYVGTPHISKEALYYTSGHLP 322

Query: 313 SYRANMFAVKCADDT-------IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEF 365
            Y  NMF     D+        +K+   + LK MNCP H  +F    +SYRELP+RL EF
Sbjct: 323 YYGENMFPPISVDEVRDESGEIVKEGTPYRLKAMNCPMHNLIFRSRGRSYRELPLRLFEF 382

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
           G+VYR+E SG +HGL RVR  TQDD+H +  +E    E   +   ++S+ +DFG     +
Sbjct: 383 GTVYRDEASGVVHGLTRVRALTQDDSHSYVAQEDAAKEIRHLLEFVLSLLRDFGLNDFYL 442

Query: 426 KLSTRPE------KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL----GEGAFY 475
           +LSTR E      K +GSD  W +A  +++ V             TG+ L    G  AFY
Sbjct: 443 ELSTRDEDGKKKDKFIGSDEQWAEATQVLEEVAS----------ETGLELVPDPGGAAFY 492

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK     +DAIGR WQ  T+Q+DFN P RF   Y  +   +  PVMIH A FGSIERF+
Sbjct: 493 GPKVSVQARDAIGRTWQMSTVQLDFNQPERFGLEYQAADGTRKQPVMIHSAKFGSIERFM 552

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
           G++IE++ G  P+WL+P+Q     +     +Y  E+A  LK+  + +E D  ++    KI
Sbjct: 553 GVLIEHYAGAFPVWLAPVQVTCIPVAEEFNDYLAEVAAQLKAAGVRVEIDDSDDRFPKKI 612

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           R  S  K+P ++I G  +    ++  R         VS+ +A+
Sbjct: 613 RNASKSKVPFVLIAGGDDRDANAVSFRFRDGEQDNGVSVAEAV 655


>gi|114600748|ref|XP_001153418.1| PREDICTED: threonyl-tRNA synthetase isoform 2 [Pan troglodytes]
 gi|114600750|ref|XP_001153486.1| PREDICTED: threonyl-tRNA synthetase isoform 3 [Pan troglodytes]
 gi|114600752|ref|XP_001153550.1| PREDICTED: threonyl-tRNA synthetase isoform 4 [Pan troglodytes]
          Length = 664

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 246/625 (39%), Positives = 356/625 (56%), Gaps = 25/625 (4%)

Query: 5   IKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEII 62
           IK+T PDG  +       T   +A  IS+ LA   V   +N  V DL  P+ E  S+E++
Sbjct: 24  IKVTLPDGKQVDAESWKTTPYQIACGISQGLADNTVIAKVNNLVWDLDRPLEEDCSLELL 83

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQ 121
             ED  + AV  HS AHIM EA++ ++    +  GP IE+GFYYD + +E   SS++ + 
Sbjct: 84  KFEDEEAQAVYWHSSAHIMGEAMERVYGGC-LCYGPPIENGFYYDMYLEEGGVSSNDFSS 142

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +E   ++II     F +  +  E    +F+  K  +K  IL         T+YR G   D
Sbjct: 143 LEALCKKIIKEKQAFERLEVKKETLLAMFKYNK--FKCRILNEKVNTPTTTVYRCGPLID 200

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHVR TG++K   K+ K +  YW G ++   L RIYG ++   + L ++  F EE+
Sbjct: 201 LCRGPHVRHTGKIKAL-KIHKNSSTYWEGKADMETLQRIYGISFPDPKMLKEWEKFQEEA 259

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVL 300
           + RDHRK+ R+ +L+   E   G  F+  KG  I+  LI ++R +  K  ++E+ TP + 
Sbjct: 260 KNRDHRKIGRDQELYFFHELSPGSCFFLPKGAYIYNALIEFIRSEYRKRGFQEVVTPNIF 319

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  LW  SGHW  Y  NMF+ +   +       FALKPMNCPGH  +F+H  +S+RELP+
Sbjct: 320 NSRLWMTSGHWQHYSENMFSFEVEKEL------FALKPMNCPGHCLMFDHRPRSWRELPL 373

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLA+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E     + + ++Y  FGF
Sbjct: 374 RLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSVFGF 433

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
               + LSTRPEK +G   +WD AE  ++  L+      +  +N+    G+GAFYGPK +
Sbjct: 434 -SFKLNLSTRPEKFLGDIEVWDQAEKQLENSLNEFGEKWE--LNS----GDGAFYGPKID 486

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH--SEKCHPVMIHRAVFGSIERFIGIM 538
             +KDAIGR  QC TIQ+DF LP RFN  YV SH   +K  PV++HRA+ GS+ER I I+
Sbjct: 487 IQIKDAIGRYHQCATIQLDFQLPIRFNLTYV-SHDGDDKKRPVIVHRAILGSVERMIAIL 545

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIRE 597
            EN+ G  P WLSP Q +V  +  +  EYAQ++           + D     T+N KIR 
Sbjct: 546 TENYGGKWPFWLSPRQVMVVPVGPTCDEYAQKVRQQFHDAKFMADIDLDPGCTLNKKIRN 605

Query: 598 HSIKKIPIIIICGDKEASERSIGIR 622
             + +   I++ G+KE    ++ IR
Sbjct: 606 AQLAQYNFILVVGEKEKISGTVNIR 630


>gi|114600738|ref|XP_517835.2| PREDICTED: threonyl-tRNA synthetase isoform 10 [Pan troglodytes]
 gi|114600740|ref|XP_001153787.1| PREDICTED: threonyl-tRNA synthetase isoform 6 [Pan troglodytes]
 gi|114600742|ref|XP_001153971.1| PREDICTED: threonyl-tRNA synthetase, cytoplasmic isoform 9 [Pan
           troglodytes]
          Length = 723

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 244/624 (39%), Positives = 355/624 (56%), Gaps = 23/624 (3%)

Query: 5   IKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEII 62
           IK+T PDG  +       T   +A  IS+ LA   V   +N  V DL  P+ E  S+E++
Sbjct: 83  IKVTLPDGKQVDAESWKTTPYQIACGISQGLADNTVIAKVNNLVWDLDRPLEEDCSLELL 142

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQ 121
             ED  + AV  HS AHIM EA++ ++    +  GP IE+GFYYD + +E   SS++ + 
Sbjct: 143 KFEDEEAQAVYWHSSAHIMGEAMERVYGGC-LCYGPPIENGFYYDMYLEEGGVSSNDFSS 201

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +E   ++II     F +  +  E    +F+  K  +K  IL         T+YR G   D
Sbjct: 202 LEALCKKIIKEKQAFERLEVKKETLLAMFKYNK--FKCRILNEKVNTPTTTVYRCGPLID 259

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHVR TG++K   K+ K +  YW G ++   L RIYG ++   + L ++  F EE+
Sbjct: 260 LCRGPHVRHTGKIKAL-KIHKNSSTYWEGKADMETLQRIYGISFPDPKMLKEWEKFQEEA 318

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVL 300
           + RDHRK+ R+ +L+   E   G  F+  KG  I+  LI ++R +  K  ++E+ TP + 
Sbjct: 319 KNRDHRKIGRDQELYFFHELSPGSCFFLPKGAYIYNALIEFIRSEYRKRGFQEVVTPNIF 378

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  LW  SGHW  Y  NMF+ +   +       FALKPMNCPGH  +F+H  +S+RELP+
Sbjct: 379 NSRLWMTSGHWQHYSENMFSFEVEKEL------FALKPMNCPGHCLMFDHRPRSWRELPL 432

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLA+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E     + + ++Y  FGF
Sbjct: 433 RLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSVFGF 492

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
               + LSTRPEK +G   +WD AE  ++  L+      +  +N+    G+GAFYGPK +
Sbjct: 493 -SFKLNLSTRPEKFLGDIEVWDQAEKQLENSLNEFGEKWE--LNS----GDGAFYGPKID 545

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIGIMI 539
             +KDAIGR  QC TIQ+DF LP RFN  YV+    +K  PV++HRA+ GS+ER I I+ 
Sbjct: 546 IQIKDAIGRYHQCATIQLDFQLPIRFNLTYVSHDGDDKKRPVIVHRAILGSVERMIAILT 605

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIREH 598
           EN+ G  P WLSP Q +V  +  +  EYAQ++           + D     T+N KIR  
Sbjct: 606 ENYGGKWPFWLSPRQVMVVPVGPTCDEYAQKVRQQFHDAKFMADIDLDPGCTLNKKIRNA 665

Query: 599 SIKKIPIIIICGDKEASERSIGIR 622
            + +   I++ G+KE    ++ IR
Sbjct: 666 QLAQYNFILVVGEKEKISGTVNIR 689


>gi|306836251|ref|ZP_07469233.1| threonine--tRNA ligase [Corynebacterium accolens ATCC 49726]
 gi|304567843|gb|EFM43426.1| threonine--tRNA ligase [Corynebacterium accolens ATCC 49726]
          Length = 687

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 246/660 (37%), Positives = 378/660 (57%), Gaps = 50/660 (7%)

Query: 20  HATGSDVAESISRSLAKKAVAV--AINGKVCDLS-DPVREGSIEIITPEDPRSLAVIRHS 76
            A G+ + E    +   +AV V   ++G + DLS  P  E +   +   +    AVIRHS
Sbjct: 21  QAVGAALRELKLPNKGPEAVVVVRGVDGTLYDLSHTPDEESTFVPVAACEEDGRAVIRHS 80

Query: 77  CAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPF 136
           CAH+MA+AVQ+ +P  ++ IGP IE+GFY+DF   +PF+ ++L  +EK+M++II     F
Sbjct: 81  CAHVMAQAVQAEFPGTKLGIGPSIENGFYFDFQTAEPFTPEDLKNLEKRMKKIIKGGQRF 140

Query: 137 LKQ-YLSHEKARELFESKKEAYKVEILE--------SIPAKE----NVTLY-------RQ 176
            +  Y S  +A +  +   E +K+E+++        S  A E    ++T Y        +
Sbjct: 141 ERHTYASTAEAEQALQD--EPFKLELIQDKGNVDPDSDEAAEVGVGDLTHYDNVNPRTNE 198

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
            EWFDLCRGPHV +T  +  F  L + + AYWRGD     L RIYGTA+ ++  L  Y  
Sbjct: 199 VEWFDLCRGPHVPTTKYIPAF-ALTRSSAAYWRGDQANAGLQRIYGTAFESKDALAAYQT 257

Query: 237 FLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEI 294
            +EE+EKRDHR+L +E+DLF   ++ GSG   +H  G  +   + ++ R R ++  Y  +
Sbjct: 258 MVEEAEKRDHRRLGQELDLFSFPDEIGSGFPVFHPNGATVRMEMENHSRNRHVQAGYSFV 317

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCAD-------DTIKDLRTFALKPMNCPGHVAV 347
           NTP +    L+++SGH D Y   MF     D       + +K+ + +  KPMNCP H  +
Sbjct: 318 NTPHITKGDLFRKSGHLDFYSDGMFPPMQLDGEYDAEGNAVKEPQDYYAKPMNCPMHNLI 377

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
           F    +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDDAH++CT+EQ+  E  ++
Sbjct: 378 FASRGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYCTEEQLEEELTQV 437

Query: 408 HNLIISIYKDFGFEKIMVKLSTR-PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
            + IIS+ +D+G     ++LST+ P K VGSD +W+ +  I++ V +           +G
Sbjct: 438 LDFIISLLEDYGLSDFYLELSTKDPNKFVGSDEIWERSTAILQSVAE----------KSG 487

Query: 467 VLL---GEGA-FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
           + L    EGA FYGPK     +DAIGR WQ  T+Q+DFNLP RF   Y  S   K  P+M
Sbjct: 488 LELVPDPEGAAFYGPKISVQARDAIGRTWQMSTVQLDFNLPERFELEYTASDGTKKRPIM 547

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSI 582
           IHRA+FGSIERF G+++E++ G  P WL+P Q +   +    V + + +A  L+   +  
Sbjct: 548 IHRALFGSIERFFGVLLEHYAGAFPAWLAPHQVMGIPVADDFVPHLEGVAAKLRRKGIRA 607

Query: 583 ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           + D  ++ +  KIR H+  K+P +++ G ++A   ++  R    T    V + +A+ +++
Sbjct: 608 DVDTSDDRMQKKIRNHTTGKVPFMLVDGARDAEAGAVSFRFLDGTQVNGVPVDEAVELIS 667


>gi|291165911|gb|EFE27958.1| threonine--tRNA ligase [Filifactor alocis ATCC 35896]
          Length = 655

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 233/636 (36%), Positives = 363/636 (57%), Gaps = 37/636 (5%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           +K+T  DGS+K +    +  ++A  IS+ LA+ A A  I+G+V DL   + +   + I+T
Sbjct: 1   MKVTLKDGSVKEYEGSKSVYEIASDISQGLARVACAGMIDGEVVDLRTVIEQDCELSILT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P D   L  IRH+ +H++AEAV+ ++P+ ++AIGP I+ GFYYD D   PF+ ++L  +E
Sbjct: 61  PTDEEGLRTIRHTASHVLAEAVKRVFPDAKLAIGPAIDTGFYYDID-HAPFTREDLDTLE 119

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF-DL 182
           K+M++II  D    K  L  E+A +L E K E YKVE+++ +P    ++ Y+QGE F DL
Sbjct: 120 KEMKKIIKEDEKITKFELPREEAIKLMEEKNEPYKVELIQDLPEDAVISFYQQGEEFIDL 179

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPH+ ST  +K + KL+  + AYWRGDS++  L RIYGTA+N ++EL  YL +LEE +
Sbjct: 180 CAGPHLMSTKGIKAY-KLISSSMAYWRGDSDKAQLQRIYGTAFNKKEELADYLVYLEEIK 238

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD------DYEEIN 295
           KRDH KL REM+LF   +  G G+     KG K+   L    +R I+D       Y    
Sbjct: 239 KRDHNKLGREMELFTTVDVIGQGLPLLLPKGTKMVMKL----QRWIEDLEDREWGYVRTK 294

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP +    L++ SGHWD Y+  MF +   D+ + D   FAL+PM CP    V+ +  KSY
Sbjct: 295 TPLMAKSDLYRISGHWDHYKEGMFVL--GDEEV-DKEVFALRPMTCPFQYYVYKNTQKSY 351

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           R+LP R+ E  +++RNE SG +HGL RVR FT  + H     +Q   E     NL + + 
Sbjct: 352 RDLPYRMGETSTLFRNEDSGEMHGLTRVRQFTISEGHNVVRPDQAEEELQNCLNLAVYVL 411

Query: 416 KDFGFEK-IMVKLS----TRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL- 469
              G +  +  +LS       EK +G ++ W+  +  ++ +L          +  G+   
Sbjct: 412 TTLGLQDDVTFRLSKWDPNNREKYLGDESYWETTQEALRNIL----------VEKGLPFK 461

Query: 470 ---GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
              GE AFYGPK +   ++  G++    TIQ+D  +   F+ +Y++ + EK  P +IHR 
Sbjct: 462 EADGEAAFYGPKIDIQARNVYGKEDTMITIQLDCAIAENFDMYYIDQNGEKKRPYIIHRT 521

Query: 527 VFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF 586
             G  ER +  +IE + G  P WL P Q  +  I+    EYA+E+   L  + + +  D 
Sbjct: 522 SLGCYERTLAWLIEKYAGKFPTWLCPEQVRILPISDKYAEYAEEVKQELARNGVDVTVDH 581

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           R+E I +KIR+  + ++P +++ G+KEAS+R++ +R
Sbjct: 582 RSEKIGFKIRDARLNRLPYMLVVGEKEASDRTVSVR 617


>gi|242033449|ref|XP_002464119.1| hypothetical protein SORBIDRAFT_01g012680 [Sorghum bicolor]
 gi|241917973|gb|EER91117.1| hypothetical protein SORBIDRAFT_01g012680 [Sorghum bicolor]
          Length = 739

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 233/625 (37%), Positives = 366/625 (58%), Gaps = 24/625 (3%)

Query: 5   IKLTFPDGSIKNFPVH-ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           IK+T PDG+IK       T  D+A+ IS   A   +   ++  + D+  P+  +  +++ 
Sbjct: 105 IKVTLPDGAIKEGKKWITTPMDIAKEISSGFASSCLIAQVDETLWDMGRPLESDCKLQMF 164

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE--DGFYYD-FDKEQPFSSDEL 119
             +         HS AHI+ E+++  +   ++ IGP     +GFYYD + K+Q  + +  
Sbjct: 165 KFDTNEGRDTFWHSSAHILGESIERAYG-CKLCIGPCTTRGEGFYYDAYYKDQTLNEEHF 223

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IE + ++ +A   PF +  +S  +A E+F   +  +KVEI+  +P  + +T+YR G  
Sbjct: 224 GIIESQAKKAVAEKQPFERIEVSRAEALEMFAENE--FKVEIINELPEDKTITVYRCGPL 281

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPH+ +T  VK F   +K + +YWRG  +R  L R+YG ++   + LT+Y +FLE
Sbjct: 282 VDLCRGPHIPNTSFVKAF-ACLKASSSYWRGKVDRESLQRVYGISFPDSRRLTEYKHFLE 340

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E++KRDHR L +  +LF   E   G  F+   G +I+  L+ +MR++ +   Y+E+ +P 
Sbjct: 341 EAKKRDHRILGKAQELFFFHELSPGSCFFLPHGARIYNKLMDFMRQQYRARGYQEVLSPN 400

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           + +  LW+ SGH  +Y+ NMF  +       + + F LKPMNCPGH  +F + ++SYREL
Sbjct: 401 MYNMQLWETSGHAANYKENMFVFEI------EKQEFGLKPMNCPGHCLMFANRVRSYREL 454

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+A+FG ++RNE SG+L GL RVR F QDDAH+FC ++Q+ +E   + + I  +Y+ F
Sbjct: 455 PLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCREDQIKDEVKAVLDFINYVYEIF 514

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF K  ++LSTRPEK +G    W+ AE  +   L+        +IN     G+GAFYGPK
Sbjct: 515 GF-KYELELSTRPEKYLGEIETWNKAEQQLTEALNEFGKPW--KINE----GDGAFYGPK 567

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC-HPVMIHRAVFGSIERFIGI 537
            +  + DA+ R +QC T+Q+DF LP RF   Y      K   PVMIHRA+ GS+ER   I
Sbjct: 568 IDIGVFDALKRKFQCATLQLDFQLPIRFKLAYSAEDEAKIERPVMIHRAILGSVERMFAI 627

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           ++E++ G  PLWLSP QAIV +++S +VEYA+++   L       + D  + TI  K+RE
Sbjct: 628 LLEHYNGKWPLWLSPRQAIVCSVSSGSVEYAKQVLATLHEAGFHADIDASDRTIQKKVRE 687

Query: 598 HSIKKIPIIIICGDKEASERSIGIR 622
             + +   I++ G +EA   +I +R
Sbjct: 688 AQLAQFNYILVVGAQEAETGNICVR 712


>gi|52632425|gb|AAH10578.2| Threonyl-tRNA synthetase [Homo sapiens]
          Length = 723

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 243/624 (38%), Positives = 356/624 (57%), Gaps = 23/624 (3%)

Query: 5   IKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEII 62
           IK+T PDG  +       T   +A  IS+ LA   V   +N  V DL  P+ E  ++E++
Sbjct: 83  IKVTLPDGKQVDAESWKTTPYQIACGISQGLADNTVIAKVNNVVWDLDRPLEEDCTLELL 142

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQ 121
             ED  + AV  HS AHIM EA++ ++    +  GP IE+GFYYD + +E   SS++ + 
Sbjct: 143 KFEDEEAQAVYWHSSAHIMGEAMERVYGGC-LCYGPPIENGFYYDMYLEEGGVSSNDFSS 201

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +E   ++II     F +  +  E    +F+  K  +K  IL         T+YR G   D
Sbjct: 202 LEALCKKIIKEKQAFERLEVKKETLLAMFKYNK--FKCRILNEKVNTPTTTVYRCGPLID 259

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHVR TG++K   K+ K +  YW G ++   L RIYG ++   + L ++  F EE+
Sbjct: 260 LCRGPHVRHTGKIKAL-KIHKNSSTYWEGKADMETLQRIYGISFPDPKMLKEWEKFQEEA 318

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVL 300
           + RDHRK+ R+ +L+   E   G  F+  KG  I+  LI ++R +  K  ++E+ TP + 
Sbjct: 319 KNRDHRKIGRDQELYFFHELSPGSCFFLPKGAYIYNALIEFIRSEYRKRGFQEVVTPNIF 378

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  LW  SGHW  Y  NMF+ +   +       FALKPMNCPGH  +F+H  +S+RELP+
Sbjct: 379 NSRLWMTSGHWQHYSENMFSFEVEKEL------FALKPMNCPGHCLMFDHRPRSWRELPL 432

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLA+FG ++RNE SG+L GL+RVR F QDDAH+FC  EQ+ +E     + + ++Y  FGF
Sbjct: 433 RLADFGVLHRNELSGALTGLIRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSVFGF 492

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
               + LSTRPEK +G   +WD AE  ++  L+      +  +N+    G+GAFYGPK +
Sbjct: 493 -SFKLNLSTRPEKFLGDIEVWDQAEKQLENSLNEFGEKWE--LNS----GDGAFYGPKID 545

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIGIMI 539
             +KDAIGR  QC TIQ+DF LP RFN  YV+    +K  PV++HRA+ GS+ER I I+ 
Sbjct: 546 IQIKDAIGRYHQCATIQLDFQLPIRFNLTYVSHDGDDKKRPVIVHRAILGSVERMIAILT 605

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIREH 598
           EN+ G  P WLSP Q +V  +  +  EYAQ++           + D     T+N KIR  
Sbjct: 606 ENYGGKWPFWLSPRQVMVVPVGPTCDEYAQKVRQQFHDAKFMADIDLDPGCTLNKKIRNA 665

Query: 599 SIKKIPIIIICGDKEASERSIGIR 622
            + +   I++ G+KE    ++ IR
Sbjct: 666 QLAQYNFILVVGEKEKISGTVNIR 689


>gi|302671729|ref|YP_003831689.1| threonyl-tRNA synthetase ThrZ [Butyrivibrio proteoclasticus B316]
 gi|302396202|gb|ADL35107.1| threonyl-tRNA synthetase ThrZ [Butyrivibrio proteoclasticus B316]
          Length = 634

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 237/613 (38%), Positives = 349/613 (56%), Gaps = 45/613 (7%)

Query: 70  LAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQE 128
           L V RHS AH++A+AV  ++  EVQ AIGP I+DG YYDF   +  + D+   IE KM+E
Sbjct: 14  LEVYRHSMAHVLAKAVIELYGKEVQYAIGPQIDDGCYYDFVLPKAVTQDDFKTIEDKMRE 73

Query: 129 IIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE-WFDLCRGPH 187
           II R   + ++ +S  +A E+F+ +K  +K E++  +P  E +T+Y  G+ + DLCRGPH
Sbjct: 74  IIKRREDWTRKEVSKSEALEMFKDQK--FKTELINDLPEDEVITVYYTGDDYVDLCRGPH 131

Query: 188 VRSTGQVKKF-FKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDH 246
           V ++ ++    +++  V+GAYWRGD  R  LSRIY  A+ ++ EL  ++  ++E+ +RDH
Sbjct: 132 VDNSQELMNVSYQIKSVSGAYWRGDEKRDQLSRIYLYAFPSKDELKHHIKMIQEALERDH 191

Query: 247 RKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLW 305
           +K+  E+DLF   E   G+ +W  +GWK++Q L+ Y R  + +  Y EI  P V ++ LW
Sbjct: 192 KKIGAELDLFMFDETAPGMPYWLPRGWKMYQALLKYSREIQERHGYTEIAAPLVNNKKLW 251

Query: 306 QQSGHWDSYRANMFAVKC------ADDTI--------------KDLR------------- 332
             SGHW  Y  NMF V        AD  I              K+++             
Sbjct: 252 LISGHWAHYVNNMFMVPGVSGWLKADAEIPGILENNNDPTEEPKNIKIQAGSVIYNREQN 311

Query: 333 -TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
            T A KPMNCP  +  +     SY+ELP+R +E+  ++R E SG ++GL RV+ F QDD 
Sbjct: 312 DTMAAKPMNCPNAMMTYKRTNHSYKELPIRYSEYDVLHRKEKSGQMNGLFRVQEFRQDDD 371

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
           H F  + Q+  E   +  +   IY  FG      +LSTRPE  +G   +W+ AE  +K +
Sbjct: 372 HTFVMESQIKEEIADVIAIADEIYSTFGV-TYRAELSTRPEDFMGDIEVWNRAEAALKEI 430

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
           LD         IN G    +GAFYGPK +  +KDA+GR+WQCGT+Q+DF LP  F   Y 
Sbjct: 431 LDEKYGEGGYEINEG----DGAFYGPKIDLQIKDALGREWQCGTVQLDFQLPHNFGLTYQ 486

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
                   PV+IHRA++GS+ERFIGI+IENFKG  P WLSP Q  +  I     EYA+E+
Sbjct: 487 AQDGTMQMPVVIHRAIYGSLERFIGIIIENFKGVFPFWLSPYQVGIVPIRLEHNEYAKEV 546

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
              L +  + +E D+ +  +  KI++    K P I++ GDKEA+ER++ I   GS    +
Sbjct: 547 EQALMNAGIRVEADYSDNNMKEKIKKFKNYKDPYILVVGDKEAAERTVSINVRGSNKQVQ 606

Query: 632 VSLLDAIPILTKE 644
              LDA+  + K+
Sbjct: 607 NVPLDALVAMCKK 619


>gi|123981026|gb|ABM82342.1| threonyl-tRNA synthetase [synthetic construct]
 gi|123995829|gb|ABM85516.1| threonyl-tRNA synthetase [synthetic construct]
          Length = 711

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 243/624 (38%), Positives = 355/624 (56%), Gaps = 23/624 (3%)

Query: 5   IKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEII 62
           IK+T PDG  +       T   +A  IS+ LA   V   +N  V DL  P+ E  ++E++
Sbjct: 71  IKVTLPDGKQVDAESWKTTPYQIACGISQGLADNTVIAKVNNVVWDLDRPLEEDCTLELL 130

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQ 121
             ED  + AV  HS AHIM EA++ ++    +  GP IE+GFYYD + +E   SS++ + 
Sbjct: 131 KFEDEEAQAVYWHSSAHIMGEAMERVYGGC-LCYGPPIENGFYYDMYLEEGGVSSNDFSS 189

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +E   ++II     F +  +  E    +F+  K  +K  IL         T+YR G   D
Sbjct: 190 LEALCKKIIKEKQAFERLEVKKETLLAMFKYNK--FKCRILNEKVNTPTTTVYRCGPLID 247

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHVR TG++K   K+ K +  YW G ++   L RIYG ++   + L ++  F EE+
Sbjct: 248 LCRGPHVRHTGKIKAL-KIHKNSSTYWEGKADMETLQRIYGISFPDPKMLKEWEKFQEEA 306

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVL 300
           + RDHRK+ R+ +L+   E   G  F+  KG  I+  LI ++R +  K  ++E+ TP + 
Sbjct: 307 KNRDHRKIGRDQELYFFHELSPGSCFFLPKGAYIYNALIEFIRSEYRKRGFQEVVTPNIF 366

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  LW  SGHW  Y  NMF+ +   +       FALKPMNCPGH  +F+H  +S+RELP+
Sbjct: 367 NSRLWMTSGHWQHYSENMFSFEVEKEL------FALKPMNCPGHCLMFDHRPRSWRELPL 420

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLA+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E     + + ++Y  FGF
Sbjct: 421 RLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSVFGF 480

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
               + LSTRPEK +G   +WD AE  ++  L+      +  +N+    G+GAFYGPK +
Sbjct: 481 -SFKLNLSTRPEKFLGDIEVWDQAEKQLENSLNEFGEKWE--LNS----GDGAFYGPKID 533

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIGIMI 539
             +KDAIGR  QC TIQ+DF LP RFN  YV+    +K  PV++HRA+ GS+ER I I+ 
Sbjct: 534 IQIKDAIGRYHQCATIQLDFQLPIRFNLTYVSHDGDDKKRPVIVHRAILGSVERMIAILT 593

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIREH 598
           EN+ G  P WLSP Q +V  +  +  EYAQ++           + D     T+N KIR  
Sbjct: 594 ENYGGKWPFWLSPRQVMVVPVGPTCDEYAQKVRQQFHDAKFMADIDLDPGCTLNKKIRNA 653

Query: 599 SIKKIPIIIICGDKEASERSIGIR 622
            + +   I++ G+KE    ++ IR
Sbjct: 654 QLAQYNFILVVGEKEKISGTVNIR 677


>gi|74142262|dbj|BAE31895.1| unnamed protein product [Mus musculus]
          Length = 722

 Score =  431 bits (1107), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 244/625 (39%), Positives = 358/625 (57%), Gaps = 25/625 (4%)

Query: 5   IKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           IK+T PDG  +       T   +A  IS+ LA   V   +N  V DL  P+  + ++E++
Sbjct: 82  IKVTLPDGKQVDAESWKTTPYQIACGISQGLADNTVVAKVNKVVWDLDRPLETDCTLELL 141

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQ 121
             ED  + AV  HS AHIM EA++ ++    +  GP IE+GFYYD + +E   SS++ + 
Sbjct: 142 KFEDEEAQAVYWHSNAHIMGEAMERVYGGC-LCYGPPIENGFYYDMYLEEGGVSSNDFSS 200

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +E   ++II     F +  +  E   E+F+  K  +K  IL         T+YR G   D
Sbjct: 201 LETLCKKIIKEKQTFERLEVKKETLLEMFKYNK--FKCRILNEKVNTPTTTVYRCGPLID 258

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHVR TG++K   K+ K +  YW G ++   L RIYG ++   + L ++  F EE+
Sbjct: 259 LCRGPHVRHTGKIKTL-KIHKNSSTYWEGKADMETLQRIYGISFPDPKLLKEWEKFQEEA 317

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVL 300
           + RDHRK+ R+ +L+   E   G  F+  KG  I+ TL+ ++R +  K  ++E+ TP + 
Sbjct: 318 KNRDHRKIGRDQELYFFHELSPGSCFFLPKGAYIYNTLMEFIRSEYRKRGFQEVVTPNIF 377

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  LW  SGHW  Y  NMF+ +   +       FALKPMNCPGH  +F+H  +S+RELP+
Sbjct: 378 NSRLWMTSGHWQHYSENMFSFEVEKEQ------FALKPMNCPGHCLMFDHRPRSWRELPL 431

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLA+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E     + + ++Y  FGF
Sbjct: 432 RLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSVFGF 491

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
               + LSTRPEK +G   +W+ AE  ++  L+      +  +N     G+GAFYGPK +
Sbjct: 492 -SFKLNLSTRPEKFLGDIEIWNQAEKQLENSLNEFGEKWE--LNP----GDGAFYGPKID 544

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH--SEKCHPVMIHRAVFGSIERFIGIM 538
             +KDAIGR  QC TIQ+DF LP RFN  YV SH   +K  PV++HRA+ GS+ER I I+
Sbjct: 545 IQIKDAIGRYHQCATIQLDFQLPIRFNLTYV-SHDGDDKKRPVIVHRAILGSVERMIAIL 603

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIRE 597
            E + G  P WLSP Q +V  +  +  EYAQ++           +TD     T+N KIR 
Sbjct: 604 TEKYGGKWPFWLSPRQVMVVPVGPTCDEYAQKVRQQFHDAKFMADTDLDPGCTLNKKIRN 663

Query: 598 HSIKKIPIIIICGDKEASERSIGIR 622
             + +   I++ G+KE +  ++ IR
Sbjct: 664 AQLAQYNFILVVGEKEKASGTVNIR 688


>gi|38202255|ref|NP_689508.3| threonyl-tRNA synthetase, cytoplasmic [Homo sapiens]
 gi|60267755|sp|P26639|SYTC_HUMAN RecName: Full=Threonyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|33875537|gb|AAH00517.2| Threonyl-tRNA synthetase [Homo sapiens]
 gi|119631209|gb|EAX10804.1| threonyl-tRNA synthetase, isoform CRA_b [Homo sapiens]
 gi|158258124|dbj|BAF85035.1| unnamed protein product [Homo sapiens]
 gi|168277378|dbj|BAG10667.1| threonyl-tRNA synthetase [synthetic construct]
 gi|190690713|gb|ACE87131.1| threonyl-tRNA synthetase protein [synthetic construct]
          Length = 723

 Score =  431 bits (1107), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 243/624 (38%), Positives = 355/624 (56%), Gaps = 23/624 (3%)

Query: 5   IKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEII 62
           IK+T PDG  +       T   +A  IS+ LA   V   +N  V DL  P+ E  ++E++
Sbjct: 83  IKVTLPDGKQVDAESWKTTPYQIACGISQGLADNTVIAKVNNVVWDLDRPLEEDCTLELL 142

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQ 121
             ED  + AV  HS AHIM EA++ ++    +  GP IE+GFYYD + +E   SS++ + 
Sbjct: 143 KFEDEEAQAVYWHSSAHIMGEAMERVYGGC-LCYGPPIENGFYYDMYLEEGGVSSNDFSS 201

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +E   ++II     F +  +  E    +F+  K  +K  IL         T+YR G   D
Sbjct: 202 LEALCKKIIKEKQAFERLEVKKETLLAMFKYNK--FKCRILNEKVNTPTTTVYRCGPLID 259

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHVR TG++K   K+ K +  YW G ++   L RIYG ++   + L ++  F EE+
Sbjct: 260 LCRGPHVRHTGKIKAL-KIHKNSSTYWEGKADMETLQRIYGISFPDPKMLKEWEKFQEEA 318

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVL 300
           + RDHRK+ R+ +L+   E   G  F+  KG  I+  LI ++R +  K  ++E+ TP + 
Sbjct: 319 KNRDHRKIGRDQELYFFHELSPGSCFFLPKGAYIYNALIEFIRSEYRKRGFQEVVTPNIF 378

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  LW  SGHW  Y  NMF+ +   +       FALKPMNCPGH  +F+H  +S+RELP+
Sbjct: 379 NSRLWMTSGHWQHYSENMFSFEVEKEL------FALKPMNCPGHCLMFDHRPRSWRELPL 432

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLA+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E     + + ++Y  FGF
Sbjct: 433 RLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSVFGF 492

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
               + LSTRPEK +G   +WD AE  ++  L+      +  +N+    G+GAFYGPK +
Sbjct: 493 -SFKLNLSTRPEKFLGDIEVWDQAEKQLENSLNEFGEKWE--LNS----GDGAFYGPKID 545

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIGIMI 539
             +KDAIGR  QC TIQ+DF LP RFN  YV+    +K  PV++HRA+ GS+ER I I+ 
Sbjct: 546 IQIKDAIGRYHQCATIQLDFQLPIRFNLTYVSHDGDDKKRPVIVHRAILGSVERMIAILT 605

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIREH 598
           EN+ G  P WLSP Q +V  +  +  EYAQ++           + D     T+N KIR  
Sbjct: 606 ENYGGKWPFWLSPRQVMVVPVGPTCDEYAQKVRQQFHDAKFMADIDLDPGCTLNKKIRNA 665

Query: 599 SIKKIPIIIICGDKEASERSIGIR 622
            + +   I++ G+KE    ++ IR
Sbjct: 666 QLAQYNFILVVGEKEKISGTVNIR 689


>gi|218662034|ref|ZP_03517964.1| threonyl-tRNA synthetase [Rhizobium etli IE4771]
          Length = 305

 Score =  431 bits (1107), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 196/292 (67%), Positives = 239/292 (81%)

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           +P+RLAEFG V+R EPSG+LHGLMRVRGFTQDDAH+FCT EQM  ECLKI++LI+S+Y+D
Sbjct: 1   MPIRLAEFGLVHRYEPSGALHGLMRVRGFTQDDAHIFCTDEQMAAECLKINDLILSVYED 60

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF++I+VKLSTRPEKRVGSDALWD AE +M  VL TI+  S+ RI TG+L GEGAFYGP
Sbjct: 61  FGFKEIVVKLSTRPEKRVGSDALWDRAEAVMTDVLKTIEAQSEGRIKTGILPGEGAFYGP 120

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           KFEY LKDAIGR+WQCGT QVDFNLP RF AFY++S+SEK  PVMIHRA+ GS+ERF+GI
Sbjct: 121 KFEYTLKDAIGREWQCGTTQVDFNLPERFGAFYIDSNSEKTQPVMIHRAICGSMERFLGI 180

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IENF G++PLW+SP+Q +V TITS A  Y  E+A  L+   L++ETDFRNE INYKIRE
Sbjct: 181 LIENFAGHMPLWVSPLQVVVATITSEADAYGLEVAEALREAGLNVETDFRNEKINYKIRE 240

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPD 649
           HS+ K+P+II+CG KEA ER++ IRR GS     + L  A+  LT E+ PPD
Sbjct: 241 HSVTKVPVIIVCGRKEAEERTVNIRRLGSQDQVSMGLDAAVDSLTLEATPPD 292


>gi|33286920|gb|AAH55371.1| Threonyl-tRNA synthetase [Mus musculus]
          Length = 722

 Score =  431 bits (1107), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 244/625 (39%), Positives = 358/625 (57%), Gaps = 25/625 (4%)

Query: 5   IKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           IK+T PDG  +       T   +A  IS+ LA   V   +N  V DL  P+  + ++E++
Sbjct: 82  IKVTLPDGKQVDAESWKTTPYQIACGISQGLADNTVVAKVNKVVWDLDRPLETDCTLELL 141

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQ 121
             ED  + AV  HS AHIM EA++ ++    +  GP IE+GFYYD + +E   SS++ + 
Sbjct: 142 KFEDEEAQAVYWHSSAHIMGEAMERVYGGC-LCYGPPIENGFYYDMYLEEGGVSSNDFSS 200

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +E   ++II     F +  +  E   E+F+  K  +K  IL         T+YR G   D
Sbjct: 201 LETLCKKIIKEKQTFERLEVKKETLLEMFKYNK--FKCRILNEKVNTPTTTVYRCGPLID 258

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHVR TG++K   K+ K +  YW G ++   L RIYG ++   + L ++  F EE+
Sbjct: 259 LCRGPHVRHTGKIKTL-KIHKNSSTYWEGKADMETLQRIYGISFPDPKLLKEWEKFQEEA 317

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVL 300
           + RD+RK  R+ +L+   E   G  F+  KG  I+ TL+ ++R +  K  ++E+ TP + 
Sbjct: 318 KNRDYRKTGRDQELYFFHELSPGSCFFLPKGAYIYNTLMEFIRSEYRKRGFQEVVTPNIF 377

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  LW  SGHW  Y  NMF+ +   +       FALKPMNCPGH  +F+H  +S+RELP+
Sbjct: 378 NSRLWMTSGHWQHYSENMFSFEVEKEQ------FALKPMNCPGHCLMFDHRPRSWRELPL 431

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLA+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E     + + ++Y  FGF
Sbjct: 432 RLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSVFGF 491

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
               + LSTRPEK +G   +W+ AE  ++  L+      +  +N     G+GAFYGPK +
Sbjct: 492 -SFKLNLSTRPEKFLGDIEIWNQAEKQLENSLNEFGEKWE--LNP----GDGAFYGPKID 544

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH--SEKCHPVMIHRAVFGSIERFIGIM 538
             +KDAIGR  QC TIQ+DF LP RFN  YV SH   +K  PV++HRA+ GS+ER I I+
Sbjct: 545 IQIKDAIGRYHQCATIQLDFQLPIRFNLTYV-SHDGDDKKRPVIVHRAILGSVERMIAIL 603

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIRE 597
            EN+ G  P WLSP Q +V  +  +  EYAQ++           +TD     T+N KIR 
Sbjct: 604 TENYGGKWPFWLSPRQVMVVPVGPTCDEYAQKVRQQFHDAKFMADTDLDPGCTLNKKIRN 663

Query: 598 HSIKKIPIIIICGDKEASERSIGIR 622
             + +   I++ G+KE +  ++ IR
Sbjct: 664 AQLAQYNFILVVGEKEKASGTVNIR 688


>gi|85057943|ref|YP_456859.1| threonyl-tRNA synthetase [Aster yellows witches'-broom phytoplasma
           AYWB]
 gi|123738887|sp|Q2NIG3|SYT_AYWBP RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|84790048|gb|ABC65780.1| threonyl-tRNA synthetase [Aster yellows witches'-broom phytoplasma
           AYWB]
          Length = 641

 Score =  431 bits (1107), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 233/651 (35%), Positives = 380/651 (58%), Gaps = 23/651 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK++F D  I+ F    T   + +       KK VA   N +  +L  P+++ G++EI+T
Sbjct: 2   IKISFFDNQIQEFISGTTPLAIWKEHLSEHFKKPVAALFNNQPIELDFPLKKNGNLEILT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQI 122
             DP+SL V+ HS AH+MA+AV  ++P+    +GP I++GFYYD D ++   S  +   I
Sbjct: 62  ESDPKSLEVLNHSTAHLMAQAVARLYPDALFTVGPAIKEGFYYDIDFQKHTISEKDFLTI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK M +I   +    ++ +S EKA++LF      YK  +LE     + +++YRQGE+FDL
Sbjct: 122 EKVMHQISLENHKITREEISFEKAKKLFAYN--PYKQVLLEKF-RDQTISIYRQGEFFDL 178

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRG HV  T  +K F K++K++GAY++GD+    L+RIYGT++  +Q L  YL  LEE +
Sbjct: 179 CRGVHVIKTNLIKHF-KILKISGAYFQGDAKNKTLTRIYGTSFFKKQALADYLQLLEERK 237

Query: 243 KRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVL 300
           +RDH+K+ +E+DLF    E G G+ FW  KG  + + +  Y+  +++  DY  + TP + 
Sbjct: 238 ERDHKKINKELDLFMFNKEVGLGLPFWLPKGATVRRIVERYIVDKELSYDYHHVYTPIMA 297

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  L++ SGH D Y +NMF +   ++  K      L+PMNCP H+ ++     SY+ELP+
Sbjct: 298 NTELYRISGHLDHYASNMFPIMSLENGEK----LVLRPMNCPHHMMIYKKNPHSYKELPL 353

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G ++R E SG++ GL RVR  T +DAH+F   +Q+  E  KI NLI+ +Y DF  
Sbjct: 354 RIAELGMMHRFEKSGAVSGLQRVREMTLNDAHIFARPDQIKEEIKKIINLILEVYCDFNI 413

Query: 421 EKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           +   ++LS R     EK    D +W +AE  +K  +  +    ++ I      GE AFYG
Sbjct: 414 KNYELRLSYRNPNNTEKYFNDDQMWYNAEKTLKETIKELGLPFKEAI------GEAAFYG 467

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK +  + +A+G +    T+Q+DF LP +F+  ++   ++   PV+IHRAV  ++ERF+ 
Sbjct: 468 PKLDVQVFNALGNEETLSTVQLDFLLPQKFDLTFIGEDNKHHRPVVIHRAVVSTMERFLA 527

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++E  KG  PLWL+P+Q ++  +++    E++Q+I   L+  +  +E + ++ T+ YKI
Sbjct: 528 HLVEETKGVFPLWLAPVQVLLIPVSAPLHFEFSQKIKETLQLQNFRVEINSKDNTLGYKI 587

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           RE    KIP  ++ GD E     I  R++GS     + + + + +L  + L
Sbjct: 588 REAQKLKIPYQVVIGDHEMINNLITFRKYGSHLQTTIKVDEFVSLLKDKVL 638


>gi|198425233|ref|XP_002123203.1| PREDICTED: similar to novel prtoein similar to vertebrate
           threonyl-tRNA synthetase (TARS, zgc:92586) [Ciona
           intestinalis]
          Length = 630

 Score =  431 bits (1107), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 233/599 (38%), Positives = 347/599 (57%), Gaps = 27/599 (4%)

Query: 32  RSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWP 90
           + LA   +   +N  V DL  P+  +  ++++  +D  +  V  HS AHI+ EA++  + 
Sbjct: 5   QGLADNCIVAKVNDVVWDLDRPLETDAKLQLLKFDDEEAQTVYWHSTAHILGEAMERTYG 64

Query: 91  EVQVAIGPIIEDGFYYDF--DKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE 148
              +  GP IE GFYYD   D  Q    ++   +E  M+ I+    PF +  ++ E   +
Sbjct: 65  GC-LCYGPPIEQGFYYDMFMDGRQVSDKNDFPAVENVMKSILKEKQPFERLEVTKENLLK 123

Query: 149 LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYW 208
           +F      +K+ IL         T+YR G   DLCRGPHVR TG++K F +L K +  YW
Sbjct: 124 MFAYN--PFKLRILNEKVTTPTTTVYRCGPLIDLCRGPHVRHTGKIKAF-QLYKNSATYW 180

Query: 209 RGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFW 268
            G ++   L RIYG ++  ++E+ Q+  F EE+++RDHRK+ +E +LF   E   G  F+
Sbjct: 181 EGKADMESLQRIYGISFPDKKEMKQWQKFQEEAKQRDHRKIGKEQELFFFHELSPGSCFF 240

Query: 269 HRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
             +G  I+ TLIS+++ +  K  +EE+ +P + +  LW  SGHW  Y  NMF+     +T
Sbjct: 241 FPRGAFIYNTLISFIKEEYRKRGFEEVVSPNIYNSKLWMTSGHWQHYDQNMFSFSVEKET 300

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
                 FALKPMNCPGH  +F+H  +S+RELP+R A+FG ++RNE SG+L GL RVR F 
Sbjct: 301 ------FALKPMNCPGHCLMFSHRSRSWRELPIRFADFGVLHRNELSGALTGLTRVRRFQ 354

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENI 447
           QDDAH+FC  EQ+ +E     N + ++Y  FGF    + LSTRPEK +G   +WDDAE  
Sbjct: 355 QDDAHIFCRPEQIKDEMRGALNFLKAVYDTFGF-SFKLFLSTRPEKFLGDPGMWDDAEKQ 413

Query: 448 MKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFN 507
           ++  L  ++     ++N     G+GAFYGPK +  + DA+ R  QC TIQ+DF LP RFN
Sbjct: 414 LEECL--VEFDHPWKLNP----GDGAFYGPKIDIQIMDALRRPHQCATIQLDFQLPIRFN 467

Query: 508 AFYVNSHS-EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVE 566
             YV     EK  PV+IHRA+ GS+ER I I+ EN+ G  PLWLSP Q ++  ++S   E
Sbjct: 468 LNYVTGEGDEKKRPVIIHRAILGSVERMIAILTENYGGKWPLWLSPRQVMILAVSSKYDE 527

Query: 567 YAQEIANLLKSHHLSIETDFRNE---TINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           YA+ +   L+ H   I+ D   +   T+N KIR   +++   I++ G+KE +  ++ IR
Sbjct: 528 YAESVR--LRMHEAGIQVDLEKDPGLTLNKKIRTAQLEQYNFILVVGEKEETNGTVNIR 584


>gi|314923371|gb|EFS87202.1| threonyl-tRNA synthetase [Propionibacterium acnes HL001PA1]
 gi|315093365|gb|EFT65341.1| threonyl-tRNA synthetase [Propionibacterium acnes HL060PA1]
 gi|315103379|gb|EFT75355.1| threonyl-tRNA synthetase [Propionibacterium acnes HL050PA2]
 gi|327327544|gb|EGE69320.1| threonine--tRNA ligase [Propionibacterium acnes HL103PA1]
          Length = 689

 Score =  431 bits (1107), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 239/644 (37%), Positives = 354/644 (54%), Gaps = 50/644 (7%)

Query: 36  KKAVAVAINGKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           +  VA+ ++G + DL   + +G+ +E +       L +IRHS  H+MA+AVQ ++PEV +
Sbjct: 37  RAVVAMRVDGNLVDLQRELHDGAEVEPVEATSEDGLNIIRHSATHVMAQAVQQLYPEVNL 96

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            IGP I DGFYYDF   +P + + L+++EK+M+ I+  +  F+++  + E ARE  E   
Sbjct: 97  GIGPFITDGFYYDFGNIEPVTPEVLSELEKRMKRIVKENQRFVRRVTTEESARE--ELAD 154

Query: 155 EAYKVEILESIP----------AKENVTLY----RQGE--WFDLCRGPHVRSTGQVKKFF 198
           + YK+E++ +                +T+Y    R GE  W DLCRGPHV ST  +   F
Sbjct: 155 QPYKLELIGTKGKGAEGASVEVGGGELTIYDNVRRNGEVAWKDLCRGPHVPSTKYLANAF 214

Query: 199 KLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI 258
            L K + AYW+GD     L RIYGTAW ++++L  Y   ++E+E+RDHRKL  E+DLF  
Sbjct: 215 ALTKFSAAYWKGDQANDQLQRIYGTAWASREDLAAYQQRIKEAERRDHRKLGAELDLFSF 274

Query: 259 AED-GSGVIFWHRKGWKIFQTLIS--YMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYR 315
            E+ G G++ +H KG  + + LI    + R ++  +  ++TP++    L+  SGH   Y 
Sbjct: 275 PEEIGPGLVVFHPKG-AMLRHLIEEHVIARHMEAGFNFVHTPEITKGGLFHTSGHLPYYA 333

Query: 316 ANMFAVKCAD-------DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV 368
             MF     D       +  +  + + LK MNCP H  +F    +SYRELP+R  E G  
Sbjct: 334 GTMFPPMLVDEERDEEGNVTRAGQEYYLKAMNCPMHNLIFRSRGRSYRELPLRFFEMGHD 393

Query: 369 YRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLS 428
           YR E SG +HGL R+RGF QDD+H +CT+EQ   E  K     +SI  DFG     ++LS
Sbjct: 394 YRYEKSGVVHGLTRMRGFAQDDSHTYCTREQAPGEIKKQIEFFLSILADFGLNDFYLELS 453

Query: 429 TRP------EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL----GEGAFYGPK 478
           TR       EK +GSD  W  A +     LD +  S      TG+ L    G  AFYGPK
Sbjct: 454 TRESDSAKEEKFIGSDEDWQVATD----TLDQVCRS------TGLQLVPDPGGAAFYGPK 503

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
               ++DAIGR WQ  TIQ DFN P RF+  Y  +      P+M+H A  GS+ERFIG++
Sbjct: 504 VSVQVRDAIGRTWQMSTIQYDFNQPERFDLEYAAADGTHQRPIMLHSAKLGSVERFIGVL 563

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
            E++ G  P+WLSP+Q  +  +  +  +Y    A +L S  + +ETD  ++    KIR  
Sbjct: 564 TEHYAGAFPVWLSPVQVRLVPVAEAFNDYVTGFAEVLGSRGIRVETDLSSDRFGKKIRNA 623

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           S  K+P I+I G ++A   ++  R    +    V L +A+ I+T
Sbjct: 624 SKDKVPFILIAGGEDAEAGAVSFRLRDGSQINGVVLDEAVRIIT 667


>gi|314966718|gb|EFT10817.1| threonyl-tRNA synthetase [Propionibacterium acnes HL082PA2]
          Length = 689

 Score =  431 bits (1107), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 239/644 (37%), Positives = 354/644 (54%), Gaps = 50/644 (7%)

Query: 36  KKAVAVAINGKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           +  VA+ ++G + DL   + +G+ +E +       L +IRHS  H+MA+AVQ ++PEV +
Sbjct: 37  RAVVAMRVDGNLVDLQRELHDGAEVEPVEATSEDGLNIIRHSATHVMAQAVQQLYPEVNL 96

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            IGP I DGFYYDF   +P + + L+++EK+M+ I+  +  F+++  + E ARE  E   
Sbjct: 97  GIGPFITDGFYYDFGNIEPVTPEVLSELEKRMKRIVKENQRFVRRVTTEESARE--ELAD 154

Query: 155 EAYKVEILESIP----------AKENVTLY----RQGE--WFDLCRGPHVRSTGQVKKFF 198
           + YK+E++ +                +T+Y    R GE  W DLCRGPHV ST  +   F
Sbjct: 155 QPYKLELIGTKGKGAEGASVEVGGGELTIYDNVRRNGEVAWKDLCRGPHVPSTKYLANAF 214

Query: 199 KLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI 258
            L K + AYW+GD     L RIYGTAW ++++L  Y   ++E+E+RDHRKL  E+DLF  
Sbjct: 215 ALTKFSAAYWKGDQANDQLQRIYGTAWASREDLAAYQQRIKEAERRDHRKLGAELDLFSF 274

Query: 259 AED-GSGVIFWHRKGWKIFQTLIS--YMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYR 315
            E+ G G++ +H KG  + + LI    + R ++  +  ++TP++    L+  SGH   Y 
Sbjct: 275 PEEIGPGLVVFHPKG-AMLRHLIEEHVIARHMEAGFNFVHTPEITKGGLFHTSGHLPYYA 333

Query: 316 ANMFAVKCAD-------DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV 368
             MF     D       +  +  + + LK MNCP H  +F    +SYRELP+R  E G  
Sbjct: 334 GTMFPPMLVDEERDEEGNVTRAGQEYYLKAMNCPMHNLIFRSRGRSYRELPLRFFEMGHD 393

Query: 369 YRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLS 428
           YR E SG +HGL R+RGF QDD+H +CT+EQ   E  K     +SI  DFG     ++LS
Sbjct: 394 YRYEKSGVVHGLTRMRGFAQDDSHTYCTREQAPGEIKKQIEFFLSILADFGLNDFYLELS 453

Query: 429 TRP------EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL----GEGAFYGPK 478
           TR       EK +GSD  W  A +     LD +  S      TG+ L    G  AFYGPK
Sbjct: 454 TRESDSAKEEKFIGSDEDWQVATD----TLDQVCRS------TGLRLVPDPGGAAFYGPK 503

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
               ++DAIGR WQ  TIQ DFN P RF+  Y  +      P+M+H A  GS+ERFIG++
Sbjct: 504 VSVQVRDAIGRTWQMSTIQYDFNQPERFDLEYAAADGTHQRPIMLHSAKLGSVERFIGVL 563

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
            E++ G  P+WLSP+Q  +  +  +  +Y    A +L S  + +ETD  ++    KIR  
Sbjct: 564 TEHYAGAFPVWLSPVQVRLVPVAEAFNDYVTGFAEVLGSRGIRVETDLSSDRFGKKIRNA 623

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           S  K+P I+I G ++A   ++  R    +    V L +A+ I+T
Sbjct: 624 SKDKVPFILIAGGEDAEAGAVSFRLRDGSQINGVVLDEAVRIIT 667


>gi|26326983|dbj|BAC27235.1| unnamed protein product [Mus musculus]
          Length = 722

 Score =  430 bits (1106), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 244/625 (39%), Positives = 358/625 (57%), Gaps = 25/625 (4%)

Query: 5   IKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           IK+T PDG  +       T   +A  IS+ LA   V   +N  V DL  P+  + ++E++
Sbjct: 82  IKVTLPDGKQVDAESWKTTPYQIACGISQGLADNTVVAKVNKVVWDLDRPLETDCTLELL 141

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQ 121
             ED  + AV  HS AHIM EA++ ++    +  GP IE+GFYYD + +E   SS++ + 
Sbjct: 142 KFEDEEAQAVYWHSSAHIMGEAMERVYGGC-LCYGPPIENGFYYDMYLEEGGVSSNDFSS 200

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +E   ++II     F +  +  E   E+F+  K  +K  IL         T+YR G   D
Sbjct: 201 LETLCKKIIKEKQTFERLEVKKETLLEMFKYNK--FKCRILNEKVNTPTTTVYRCGPLID 258

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHVR TG++K   K+ K +  YW G ++   L RIYG ++   + L ++  F EE+
Sbjct: 259 LCRGPHVRHTGKIKTL-KIHKNSSTYWEGKADMETLQRIYGISFPDPKLLKEWEKFQEEA 317

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVL 300
           + RDHRK+ R+ +L+   E   G  F+  KG  I+ TL+ ++R +  K  ++E+ TP + 
Sbjct: 318 KNRDHRKIGRDQELYFFHELSPGSCFFLPKGAYIYNTLMEFIRSEYRKRGFQEVVTPNIF 377

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  LW  SGHW  Y  NMF+ +   +       FALKPMNCPGH  +F+H  +S+RELP+
Sbjct: 378 NSRLWMTSGHWQHYSENMFSFEVEKEQ------FALKPMNCPGHCLMFDHRPRSWRELPL 431

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLA+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E     + + ++Y  FGF
Sbjct: 432 RLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSVFGF 491

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
               + LSTRPEK +G   +W+ AE  ++  L+      +  +N     G+GAFYGPK +
Sbjct: 492 -SFKLNLSTRPEKFLGDIEIWNQAEKQLENSLNEFGEKWE--LNP----GDGAFYGPKID 544

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH--SEKCHPVMIHRAVFGSIERFIGIM 538
             +KDAIGR  QC TIQ+ F LP RFN  YV SH   +K  PV++HRA+ GS+ER I I+
Sbjct: 545 IQIKDAIGRYHQCATIQLYFQLPIRFNLTYV-SHDGDDKKRPVIVHRAILGSVERMIAIL 603

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIRE 597
            EN+ G  P WLSP Q +V  +  +  EYAQ++           +TD     T+N KIR 
Sbjct: 604 TENYGGKWPFWLSPRQVMVVPVGPTCDEYAQKVRQQFHDAKFMADTDLDPGCTLNKKIRN 663

Query: 598 HSIKKIPIIIICGDKEASERSIGIR 622
             + +   I++ G+KE +  ++ IR
Sbjct: 664 AQLAQYNFILVVGEKEKASGTVNIR 688


>gi|327330301|gb|EGE72050.1| threonine--tRNA ligase [Propionibacterium acnes HL097PA1]
          Length = 689

 Score =  430 bits (1106), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 239/644 (37%), Positives = 354/644 (54%), Gaps = 50/644 (7%)

Query: 36  KKAVAVAINGKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           +  VA+ ++G + DL   + +G+ +E +       L +IRHS  H+MA+AVQ ++PEV +
Sbjct: 37  RAVVAMRVDGNLVDLQRELHDGAEVEPVEATSEDGLNIIRHSATHVMAQAVQQLYPEVNL 96

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            IGP I DGFYYDF   +P + + L++ EK+M+ I+  +  F+++  + E ARE  E   
Sbjct: 97  GIGPFITDGFYYDFGNIEPVTPEVLSEFEKRMKRIVKENQRFVRRVTTEESARE--ELAD 154

Query: 155 EAYKVEILESIP----------AKENVTLY----RQGE--WFDLCRGPHVRSTGQVKKFF 198
           + YK+E++ +                +T+Y    R GE  W DLCRGPHV ST  +   F
Sbjct: 155 QPYKLELIGTKGKGAEGASVEVGGGELTIYDNVRRNGEVAWKDLCRGPHVPSTKYLANAF 214

Query: 199 KLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI 258
            L K + AYW+GD     L RIYGTAW ++++L  Y   ++E+E+RDHRKL  E+DLF  
Sbjct: 215 ALTKFSAAYWKGDQANDQLQRIYGTAWASREDLAAYQQRIKEAERRDHRKLGAELDLFSF 274

Query: 259 AED-GSGVIFWHRKGWKIFQTLIS--YMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYR 315
            E+ G G++ +H KG  + + LI    + R ++  +  ++TP++    L+  SGH   Y 
Sbjct: 275 PEEIGPGLVVFHPKG-AMLRHLIEEHVIARHMEAGFYFVHTPEITKGGLFHTSGHLPYYA 333

Query: 316 ANMFAVKCAD-------DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV 368
             MF     D       + I+  + + LK MNCP H  +F    +SYRELP+R  E G  
Sbjct: 334 GTMFPPMLVDEERDEEGNVIRAGQEYYLKAMNCPMHNLIFRSRGRSYRELPLRFFEMGHD 393

Query: 369 YRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLS 428
           YR E SG +HGL R+RGF QDD+H +CT+EQ   E  K     +SI  DFG     ++LS
Sbjct: 394 YRYEKSGVVHGLTRMRGFAQDDSHTYCTREQAPGEIKKQIEFFLSILADFGLNDFYLELS 453

Query: 429 TRP------EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL----GEGAFYGPK 478
           TR       EK +GSD  W  A +     LD +  S      TG+ L    G  AFYGPK
Sbjct: 454 TRESNSAKEEKFIGSDEDWQVATD----TLDQVCRS------TGLQLVPDPGGAAFYGPK 503

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
               ++DAIGR WQ  TIQ DFN P RF+  Y  +      P+M+H A  GS+ERFIG++
Sbjct: 504 VSVQVRDAIGRTWQMSTIQYDFNQPERFDLEYAAADGTHQRPIMLHSAKLGSVERFIGVL 563

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
            E++    P+WLSP+Q  +  +  +  +Y  E A +L S  + +ETD  ++    KIR  
Sbjct: 564 TEHYAAAFPVWLSPVQVRLVPVAEAFNDYVTEFAEVLGSRGIRVETDLSSDRFGKKIRNA 623

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           S +K+P I+I G ++A   ++  R    +    V L +A+ I+ 
Sbjct: 624 SKEKVPFILIAGGEDAEAGAVSFRLRDGSQVNGVVLDEAVRIIA 667


>gi|312871712|ref|ZP_07731800.1| threonine--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
 gi|312872982|ref|ZP_07733042.1| threonine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
 gi|312874225|ref|ZP_07734259.1| threonine--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
 gi|315653646|ref|ZP_07906566.1| threonine--tRNA ligase [Lactobacillus iners ATCC 55195]
 gi|325912186|ref|ZP_08174584.1| threonine--tRNA ligase [Lactobacillus iners UPII 143-D]
 gi|329920107|ref|ZP_08276938.1| threonine--tRNA ligase [Lactobacillus iners SPIN 1401G]
 gi|311090295|gb|EFQ48705.1| threonine--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
 gi|311091504|gb|EFQ49888.1| threonine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
 gi|311092654|gb|EFQ51010.1| threonine--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
 gi|315489008|gb|EFU78650.1| threonine--tRNA ligase [Lactobacillus iners ATCC 55195]
 gi|325476136|gb|EGC79304.1| threonine--tRNA ligase [Lactobacillus iners UPII 143-D]
 gi|328936561|gb|EGG33005.1| threonine--tRNA ligase [Lactobacillus iners SPIN 1401G]
          Length = 643

 Score =  430 bits (1106), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 233/646 (36%), Positives = 368/646 (56%), Gaps = 23/646 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS K F    T  +VA SI+ SLAK AVA  +N ++  L   V  +  + IIT +
Sbjct: 5   ITLPDGSKKEFNHALTIKEVASSIATSLAKSAVAGKVNDEIRPLDFVVDTDARVAIITDK 64

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L V+R++ A +        +P V++    + EDGF+ D DKE    + EL  +EK+
Sbjct: 65  DEEGLQVLRNTAAFVFEMVASKQYPSVRLGTSELEEDGFFVDTDKEDQIKASELPDLEKE 124

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           MQ+I+        + +S  +  +LF  K + YK+E+L+     + V +Y+  ++ D    
Sbjct: 125 MQKIVKNGEKIEYKIVSKSELLDLF--KDDPYKLELLKE--EADEVAVYKLEDFVDFGFN 180

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
             + +TG++K F KL+ VAGAYW+G S+ PML RI+GTA+  + +L   L   E+ ++RD
Sbjct: 181 ALLMNTGKLKHF-KLLSVAGAYWQGKSSNPMLQRIFGTAFFKEADLKADLQRREDIKERD 239

Query: 246 HRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQH 303
           HR + R++DLF +  + G+G+ +W  KG  I + +  Y+  +++ D Y+ + TP +++  
Sbjct: 240 HRTIGRDLDLFFVDPKVGAGLPYWMPKGATIRRVIERYIIDKEVADGYQHVYTPVLMNLD 299

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
            ++ SGHW  YR +MF        + D     L+PMNCP H+ ++NH ++SYRELP+R+A
Sbjct: 300 AYKTSGHWAHYREDMFPPM----DMGDGEMLELRPMNCPSHIQIYNHHIRSYRELPIRIA 355

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           E G ++R E SG+L GL RVR  T +D H F   +Q+ +E  KI  LI+ +Y+DF     
Sbjct: 356 ELGMMHRYEKSGALSGLQRVREMTLNDGHTFVELDQVQSEFAKILKLIMEVYRDFDITDY 415

Query: 424 MVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
             +LS R     +K   +D +W+ ++ ++KG +D +       +      GE AFYGPK 
Sbjct: 416 YFRLSYRDPKNTDKYFANDEMWERSQKMLKGAMDDLG------LEYVEAEGEAAFYGPKL 469

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +   K A+G D    TIQ+DF LP RFN  YV    E+  PVM+HR + G++ERFI  + 
Sbjct: 470 DIQTKTALGNDETMSTIQLDFMLPERFNLSYVGKDGEEHRPVMVHRGIVGTMERFIAYLT 529

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           E +KG  P WL+P+Q  +  + + A  EYAQ + + L       E DFRNE + YKIRE 
Sbjct: 530 EIYKGAFPTWLAPLQVKIIPVNNDAHGEYAQNVKDQLMKLGFRAEVDFRNEKLGYKIREA 589

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
             +K+P  ++ GD E    S+ +R++GS   +  +L + +  L+ +
Sbjct: 590 QTQKVPYTLVLGDDELQHNSVNVRKYGSEDQESKALSEFVSELSAD 635


>gi|331701570|ref|YP_004398529.1| threonyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
 gi|329128913|gb|AEB73466.1| threonyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
          Length = 648

 Score =  430 bits (1106), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 233/651 (35%), Positives = 374/651 (57%), Gaps = 22/651 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEI 61
           S +   FPDGS+K F    T   +A+SI+ SL KKAVA  ++GK  +  +P+ +G  IEI
Sbjct: 2   SQLSFEFPDGSVKQFDDGVTSEAIAKSIAVSLGKKAVAAKVDGKWVNNDEPLHKGGKIEI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELA 120
           +T +    L+V+R + A I+  A+ + +  +        EDGF+ D DK +   S D+L+
Sbjct: 62  VTSDSDEGLSVLRATAAQILKMAIANDFDNIHFGESDADEDGFFVDTDKPDTQISVDQLS 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            +E  M +II +D P    +LS + A ++  +  + Y+ E++++      V  ++ G++ 
Sbjct: 122 ALEDSMHKIIKQDLPIKVVFLSADDAAKV--AGDDPYQKELVKANEVNGQVKFFQIGDFQ 179

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
            +  G  + STG+VK  FKL+ VAGAYW+G S+ PML RIY TA+N Q++L   L   +E
Sbjct: 180 SIAEGAVLPSTGKVK-IFKLLSVAGAYWQGKSSNPMLQRIYATAFNKQKDLDADLEKRKE 238

Query: 241 SEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           + +RDHR +  E+DLF +  + G+G+ +W   G  I +T+  Y+  +++ + Y+ + TP 
Sbjct: 239 AHERDHRVIGNELDLFFVDPKVGAGLPYWMPNGATIRRTIERYIVDKEVANGYQHVYTPV 298

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           + +  L++QSGHWD YR +MF        + D     L+PMNCP H+ ++NH ++SYREL
Sbjct: 299 LANLDLYKQSGHWDHYREDMFPPM----DMGDGEELELRPMNCPSHIQIYNHHIRSYREL 354

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  T +D H F   +Q+  E   I NL++ +Y DF
Sbjct: 355 PLRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQIQEEFKNILNLMVEVYHDF 414

Query: 419 GFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
                  +LS R     EK    D +W  A+ ++KG +D +     D +      GE AF
Sbjct: 415 DINDYTFRLSYRDPKNTEKYFDDDEMWTRAQTMLKGAMDEM---GLDYVEAE---GEAAF 468

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +   K A+G +    TIQ+DF LP RF+  Y+    ++  PVMIHR +  ++ERF
Sbjct: 469 YGPKLDVQTKTALGNEETLSTIQLDFMLPERFDLHYIGEDGKQHRPVMIHRGLVSTMERF 528

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINY 593
           +  + E +KG  P WL+P Q  +  ++    ++YA++I + L++  +    D R E + Y
Sbjct: 529 VAYLTEIYKGAFPTWLAPHQVKIIPVSQDKHLDYAKKINDQLRALKIRSSVDTRAEKMGY 588

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            IR+    KIP  ++ GD+E S  S+ +R++G   TQ  S+ D I  ++K+
Sbjct: 589 LIRDAQTHKIPYTLVVGDEEVSGNSVSVRKYGEQDTQSESVPDFIDEVSKD 639


>gi|259500519|ref|ZP_05743421.1| threonine-tRNA ligase [Lactobacillus iners DSM 13335]
 gi|302191209|ref|ZP_07267463.1| threonyl-tRNA synthetase [Lactobacillus iners AB-1]
 gi|309807138|ref|ZP_07701115.1| threonine--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
 gi|309810241|ref|ZP_07704086.1| threonine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
 gi|259167903|gb|EEW52398.1| threonine-tRNA ligase [Lactobacillus iners DSM 13335]
 gi|308166489|gb|EFO68691.1| threonine--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
 gi|308169513|gb|EFO71561.1| threonine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
          Length = 643

 Score =  430 bits (1106), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 233/646 (36%), Positives = 368/646 (56%), Gaps = 23/646 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS K F    T  +VA SI+ SLAK AVA  +N ++  L   V  +  + IIT +
Sbjct: 5   ITLPDGSKKEFNHALTIKEVASSIATSLAKSAVAGKVNDEIRPLDFVVDTDARVAIITDK 64

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L V+R++ A +        +P V++    + EDGF+ D DKE    + EL  +EK+
Sbjct: 65  DEEGLQVLRNTAAFVFEMVASKQYPSVRLGTSELEEDGFFVDTDKEDQIKASELPDLEKE 124

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           MQ+I+        + +S  +  +LF  K + YK+E+L+     + V +Y+  ++ D    
Sbjct: 125 MQKIVKNGEKIEYKIVSKSELLDLF--KDDPYKLELLKE--EADEVAVYKLEDFVDFGFN 180

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
             + +TG++K F KL+ VAGAYW+G S+ PML RI+GTA+  + +L   L   E+ ++RD
Sbjct: 181 ALLLNTGKLKHF-KLLSVAGAYWQGKSSNPMLQRIFGTAFFKEADLKADLQRREDIKERD 239

Query: 246 HRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQH 303
           HR + R++DLF +  + G+G+ +W  KG  I + +  Y+  +++ D Y+ + TP +++  
Sbjct: 240 HRTIGRDLDLFFVDPKVGAGLPYWMPKGATIRRVIERYIIDKEVADGYQHVYTPVLMNLD 299

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
            ++ SGHW  YR +MF        + D     L+PMNCP H+ ++NH ++SYRELP+R+A
Sbjct: 300 AYKTSGHWAHYREDMFPPM----DMGDGEMLELRPMNCPSHIQIYNHHIRSYRELPIRIA 355

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           E G ++R E SG+L GL RVR  T +D H F   +Q+ +E  KI  LI+ +Y+DF     
Sbjct: 356 ELGMMHRYEKSGALSGLQRVREMTLNDGHTFVELDQVQSEFAKILKLIMEVYRDFDITDY 415

Query: 424 MVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
             +LS R     +K   +D +W+ ++ ++KG +D +       +      GE AFYGPK 
Sbjct: 416 YFRLSYRDPKNTDKYFANDEMWERSQKMLKGAMDDLG------LEYVEAEGEAAFYGPKL 469

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +   K A+G D    TIQ+DF LP RFN  YV    E+  PVM+HR + G++ERFI  + 
Sbjct: 470 DIQTKTALGNDETMSTIQLDFMLPERFNLSYVGKDGEEHRPVMVHRGIVGTMERFIAYLT 529

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           E +KG  P WL+P+Q  +  + + A  EYAQ + + L       E DFRNE + YKIRE 
Sbjct: 530 EIYKGAFPTWLAPLQVKIIPVNNDAHGEYAQNVKDQLMKLGFRAEVDFRNEKLGYKIREA 589

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
             +K+P  ++ GD E    S+ +R++GS   +  +L + +  L+ +
Sbjct: 590 QTQKVPYTLVLGDDELQHNSVNVRKYGSEDQESKALSEFVSELSAD 635


>gi|241955201|ref|XP_002420321.1| threonyl-tRNA synthetase, cytoplasmic, putative [Candida
           dubliniensis CD36]
 gi|223643663|emb|CAX41396.1| threonyl-tRNA synthetase, cytoplasmic, putative [Candida
           dubliniensis CD36]
          Length = 706

 Score =  430 bits (1106), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 235/627 (37%), Positives = 357/627 (56%), Gaps = 25/627 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGS-DVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI--EI 61
           IK+T  DG++K      T   D+A SI +S A++ V   ++GK+ D+  P+ EG +  E 
Sbjct: 59  IKITLRDGTVKEGTAFETSPMDIANSIGKSFAERQVIAKVDGKLWDMPRPL-EGDVKLEF 117

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF---DKEQPFSSDE 118
           +  E P   AV  HS AHI+ EA +  +    ++ GP  EDGF+YD    + E   +  +
Sbjct: 118 LDFEHPEGKAVFWHSSAHILGEACECHYG-CHLSHGPPTEDGFFYDMSINNGETFVTQGD 176

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQG 177
              +E+   + I     F +  ++ E+  ++F   K  YKV+ + + IP   + T+YR G
Sbjct: 177 FGNLEQVATKAIKEKQKFERLEMTKEQLLKMFHYNK--YKVKFISDKIPDGTSTTVYRCG 234

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
              DLC GPH+  +G++K F K++K + +Y+ GD++   L R+YG ++  ++ +T++L F
Sbjct: 235 PLIDLCVGPHIPHSGRIKAF-KVLKNSSSYFLGDASNDSLQRVYGISFPDKKLMTEHLKF 293

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINT 296
           L E+ +RDHRK+ RE +LF   E   G   W   G +I+ TL+  +R +  K  YEE+ T
Sbjct: 294 LAEAAERDHRKIGREQELFIFNEMSPGSAMWLPHGARIYNTLVDTLRTEYRKRGYEEVIT 353

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +    LW+ SGHW +Y+ NMF+ +   +T      F LKPMNCPGH  +F    +SYR
Sbjct: 354 PNMYSTKLWETSGHWQNYKENMFSFEVEKET------FGLKPMNCPGHCILFKSRERSYR 407

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ELP R+A+FG ++RNE SG+L GL RVR F QDDAH+FCT +Q+  E   + + +  +Y 
Sbjct: 408 ELPWRVADFGVIHRNEFSGALSGLTRVRRFQQDDAHIFCTTDQIGTEIAGVFDFLKKMYG 467

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
            FGFE   ++LSTRPEK VG    W+ AE  ++  L+      +  +N G    +GAFYG
Sbjct: 468 IFGFE-FKMELSTRPEKYVGDLETWNSAEKKLEQALNDFLGEGKWELNPG----DGAFYG 522

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK + ++ DA+ R +QC TIQ+DF LP RF   Y +       PVMIHRA+ GS+ER   
Sbjct: 523 PKIDIMISDALKRWFQCATIQLDFQLPQRFELEYKSDKGPNTRPVMIHRAILGSVERMTA 582

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH-LSIETDFRNETINYKI 595
           I+ E++KG  P WLSP Q ++  +     +YAQ++   L   +    + D    T+  KI
Sbjct: 583 ILTEHYKGKWPFWLSPRQVLIVPVGPKYYDYAQKLQKKLNDDYFFYCDVDVSGNTLPKKI 642

Query: 596 REHSIKKIPIIIICGDKEASERSIGIR 622
           R   + K   I I G+ E +  S+ +R
Sbjct: 643 RTGQLYKYNFIFIVGEDEENSESVNVR 669


>gi|291395207|ref|XP_002714160.1| PREDICTED: threonyl-tRNA synthetase-like [Oryctolagus cuniculus]
          Length = 723

 Score =  430 bits (1106), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 244/625 (39%), Positives = 358/625 (57%), Gaps = 25/625 (4%)

Query: 5   IKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEII 62
           IK+T PDG  +       T   +A  IS+ LA   V   +N  V DL  P+ E  ++E++
Sbjct: 83  IKVTLPDGKQVDAESWKTTPYQIACGISQGLADNTVIAKVNKVVWDLDRPLEEDCTLELL 142

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQ 121
             ED  + AV  HS AHIM EA++ ++    +  GP IE+GFYYD + +E   SS++ A 
Sbjct: 143 KFEDEEAQAVYWHSSAHIMGEAMERVYGGC-LCYGPPIENGFYYDMYLEEGGVSSNDFAS 201

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +E   ++I+     F +  +  E   E+F+  K  +K  IL         T+YR G   D
Sbjct: 202 LETVCKKIMKEKQAFERLEVKKETLLEMFKYNK--FKCRILNEKVNTPTTTVYRCGPLID 259

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHVR TG++K   K+ K +  YW G ++   L RIYG ++   + L ++  F EE+
Sbjct: 260 LCRGPHVRHTGKIKTL-KIHKNSSTYWEGKADMETLQRIYGISFPDPKMLKEWEKFQEEA 318

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVL 300
           + RDHRK+ R+ +L+   E   G  F+  KG  I+ TL+ ++R +  K  ++E+ TP + 
Sbjct: 319 KNRDHRKIGRDQELYFFHELSPGSCFFLPKGAYIYNTLMEFIRSEYRKRGFQEVVTPNIY 378

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  LW  SGHW  Y  NMF+ +   +       FALKPMNCPGH  +F+H  +S+RELP+
Sbjct: 379 NSRLWMTSGHWQHYSENMFSFEVEKEL------FALKPMNCPGHCLMFDHRPRSWRELPL 432

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+A+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E     + + ++Y  FGF
Sbjct: 433 RVADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYNVFGF 492

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
               + LSTRPEK +G   +W+ AE  ++  L+      +  +N     G+GAFYGPK +
Sbjct: 493 -SFKLNLSTRPEKFLGDIEVWNQAEKQLENSLNEFGEKWE--LNP----GDGAFYGPKID 545

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH--SEKCHPVMIHRAVFGSIERFIGIM 538
             +KDAIGR  QC TIQ+DF LP RFN  +V SH   +K  PV+IHRA+ GS+ER I I+
Sbjct: 546 IQIKDAIGRYHQCATIQLDFQLPIRFNLTFV-SHDGDDKKRPVIIHRAILGSVERMIAIL 604

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF-RNETINYKIRE 597
            EN+ G  P WLSP Q +V  +  +  EYAQ++           + D     T+N KIR 
Sbjct: 605 TENYGGKWPFWLSPRQVMVVPVGPTCDEYAQKVRQQFHDAKFMADIDLDAGCTLNKKIRN 664

Query: 598 HSIKKIPIIIICGDKEASERSIGIR 622
             + +   I++ G+KE +  ++ IR
Sbjct: 665 AQLAQYNFILVVGEKEKTSGTVNIR 689


>gi|255019923|ref|ZP_05291997.1| Threonyl-tRNA synthetase [Acidithiobacillus caldus ATCC 51756]
 gi|254970582|gb|EET28070.1| Threonyl-tRNA synthetase [Acidithiobacillus caldus ATCC 51756]
          Length = 454

 Score =  430 bits (1106), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 204/441 (46%), Positives = 292/441 (66%), Gaps = 13/441 (2%)

Query: 198 FKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFH 257
           FKL++VAGAYWRGD+  PML RIYGTAW TQ+EL  YL  + E+E+RDHR++ R++DLF 
Sbjct: 5   FKLLRVAGAYWRGDARNPMLQRIYGTAWATQKELDAYLAQMAEAERRDHRRIGRDLDLFS 64

Query: 258 IAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYR 315
           I ED G G++FWH +G +I + +  Y R+  ++  YE + TP +  + LW  SGH D Y 
Sbjct: 65  IQEDAGGGLVFWHPQGAQIRKVIEDYWRQAHLRGGYELLYTPHIAHEKLWFTSGHKDFYA 124

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            +MF  +  +D   +   + LKPMNCP H+ ++ + L+SYR+LP+R AE G+VYR+E SG
Sbjct: 125 DSMF--QPMED---EGEPYQLKPMNCPFHILIYKNTLRSYRDLPIRWAELGTVYRHEMSG 179

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
           +LHGLMRVRGFTQDDAH+FC  +Q+  E   +  L  +I   FGF++  V LSTRPE  V
Sbjct: 180 ALHGLMRVRGFTQDDAHIFCRPDQIEAEIAGVLALTQNILGTFGFQRYEVHLSTRPEHSV 239

Query: 436 GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGT 495
           GSD +W+ A   ++G L   +   + R++ G     GAFYGPK +  ++DAIGR WQC T
Sbjct: 240 GSDEIWETATRALEGAL--ARAGLEYRVDAG----GGAFYGPKIDLKIEDAIGRKWQCST 293

Query: 496 IQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQA 555
           IQ+DFNLP RF   YV+    +  P+M+HRA+FGSIERF GI+IE+++G  PLWL+P Q 
Sbjct: 294 IQLDFNLPQRFAMEYVDEDGSRRTPIMVHRAIFGSIERFFGILIEHYEGKFPLWLAPTQV 353

Query: 556 IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEAS 615
           +V  I+    +YAQ + + L +  L +E+D RNE I YKIR H+++++P + + G++E +
Sbjct: 354 VVLPISEHQADYAQMVQSTLGAAGLRVESDLRNEKIGYKIRAHTLRRVPFLAVVGEREKA 413

Query: 616 ERSIGIRRFGSTTTQKVSLLD 636
              + +R         + L D
Sbjct: 414 AGEVALRSRDGVDLGSLKLAD 434


>gi|62897167|dbj|BAD96524.1| threonyl-tRNA synthetase variant [Homo sapiens]
          Length = 723

 Score =  430 bits (1105), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 243/624 (38%), Positives = 354/624 (56%), Gaps = 23/624 (3%)

Query: 5   IKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEII 62
           IK+T PDG  +       T   +A  IS+ LA   V   +N  V DL  P+ E  ++E++
Sbjct: 83  IKVTLPDGKQVDAESWKTTPYQIACGISQGLADNTVIAKVNNVVWDLDRPLEEDCTLELL 142

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQ 121
             ED  + AV  HS AHIM EA++ ++    +  GP IE+GFYYD + +E   SS++   
Sbjct: 143 KFEDEEAQAVYWHSSAHIMGEAMERVYGGC-LCYGPPIENGFYYDMYLEEGGVSSNDFPS 201

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +E   ++II     F +  +  E    +F+  K  +K  IL         T+YR G   D
Sbjct: 202 LEALCKKIIKEKQAFERLEVKKETLLAMFKYNK--FKCRILNEKVNTPTTTVYRCGPLID 259

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHVR TG++K   K+ K +  YW G ++   L RIYG ++   + L ++  F EE+
Sbjct: 260 LCRGPHVRHTGKIKAL-KIHKNSSTYWEGKADMETLQRIYGISFPDPKMLKEWEKFQEEA 318

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVL 300
           + RDHRK+ R+ +L+   E   G  F+  KG  I+  LI ++R +  K  ++E+ TP + 
Sbjct: 319 KNRDHRKIGRDQELYFFHELSPGSCFFLPKGAYIYNALIEFIRSEYRKRGFQEVVTPNIF 378

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  LW  SGHW  Y  NMF+ +   +       FALKPMNCPGH  +F+H  +S+RELP+
Sbjct: 379 NSRLWMTSGHWQHYSENMFSFEVEKEL------FALKPMNCPGHCLMFDHRPRSWRELPL 432

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLA+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E     + + ++Y  FGF
Sbjct: 433 RLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSVFGF 492

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
               + LSTRPEK +G   +WD AE  ++  L+      +  +N+    G+GAFYGPK +
Sbjct: 493 -SFKLNLSTRPEKFLGDIEVWDQAEKQLENSLNEFGEKWE--LNS----GDGAFYGPKID 545

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIGIMI 539
             +KDAIGR  QC TIQ+DF LP RFN  YV+    +K  PV++HRA+ GS+ER I I+ 
Sbjct: 546 IQIKDAIGRYHQCATIQLDFQLPIRFNLTYVSHDGDDKKRPVIVHRAILGSVERMIAILT 605

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIREH 598
           EN+ G  P WLSP Q +V  +  +  EYAQ++           + D     T+N KIR  
Sbjct: 606 ENYGGKWPFWLSPRQVMVVPVGPTCDEYAQKVRQQFHDAKFMADIDLDPGCTLNKKIRNA 665

Query: 599 SIKKIPIIIICGDKEASERSIGIR 622
            + +   I++ G+KE    ++ IR
Sbjct: 666 QLAQYNFILVVGEKEKISGTVNIR 689


>gi|331090802|ref|ZP_08339649.1| threonyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_46FAA]
 gi|330399910|gb|EGG79569.1| threonyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_46FAA]
          Length = 653

 Score =  430 bits (1105), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 243/640 (37%), Positives = 361/640 (56%), Gaps = 27/640 (4%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           +K+T  DGS+K +    +  ++A  IS  LA+ A A  ING+V DL   V E  S+ I+T
Sbjct: 1   MKITLKDGSVKEYAESKSVYEIALDISEGLARAACAGEINGEVVDLRTMVEEDCSLNILT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
             D   LA +RH+ +H++AEAV+ ++PE ++AIGP I+ G+YYDF+   PFS+++LA IE
Sbjct: 61  ANDKEGLAALRHTASHVLAEAVKRLYPEAKLAIGPSIDTGYYYDFE-HAPFSNEDLATIE 119

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M++II   +   +  L   +A    E K E YKVE++  +P    ++ Y+QGE+ DLC
Sbjct: 120 KEMKKIIKEGAKIERFELPRAEAIAYMEEKGEPYKVELINDLPEDAVISFYKQGEFVDLC 179

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+ ST  VK F KL+  +GAYWRGD    ML+R+YGTA+  + EL  ++  LEE +K
Sbjct: 180 AGPHLMSTKGVKAF-KLISSSGAYWRGDEKNKMLTRVYGTAYAKKDELKAHMEHLEEIKK 238

Query: 244 RDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKDD-----YEEINTP 297
           RDH KL REM LF   +  G G+     KG  I QT    M+R ++D+     Y    TP
Sbjct: 239 RDHNKLGREMGLFTTVDVIGQGLPLLMPKGAAIIQT----MQRWVEDEEEKRGYVRTKTP 294

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +  + L+  S HW  Y+  MF +   D+  +    FAL+PM CP    V+    KSYR+
Sbjct: 295 LMAKKDLYVISDHWGHYKEGMFVL--GDEDKEGEEVFALRPMTCPFQYYVYKQSQKSYRD 352

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP R  E  +++RNE SG +HGL RVR FT  + H+  T EQ+ +E     +L       
Sbjct: 353 LPCRYGETSTLFRNEDSGEMHGLTRVRQFTISEGHLVITPEQVEDEFRGCVDLAKYCLTT 412

Query: 418 FGFEK-IMVKLS----TRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
            G E+ +  +LS       +K +G+  +WD+ E+IM+ +L+ ++      I+     GE 
Sbjct: 413 LGVEEDVTYRLSLADPDNMDKYLGTREMWDEVEDIMRKMLNHLE------IDYTEETGEA 466

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           AFYGPK +   K+  G++    TIQ+D  L  RF+  +V+   EK  P +IHR   G  E
Sbjct: 467 AFYGPKLDIQAKNVYGKEDTMITIQLDMFLAERFDMSFVDKDGEKKRPYIIHRTAMGCYE 526

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
           R +  +IE + G  P WL P Q  V  I+    +YA ++   L+++ +    D R E I 
Sbjct: 527 RTLAWLIEKYAGLFPTWLCPEQVRVLPISEKYHDYAHQVLGELRANGIKCTVDDRAEKIG 586

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIR-RFGSTTTQK 631
           YKIRE  + K+P +++ G KE  E+ + +R RF     QK
Sbjct: 587 YKIRETRLDKVPYMLVVGAKEEEEKVVSVRSRFLGDEGQK 626


>gi|301779664|ref|XP_002925249.1| PREDICTED: probable threonyl-tRNA synthetase 2, cytoplasmic-like
           [Ailuropoda melanoleuca]
          Length = 890

 Score =  430 bits (1105), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 237/623 (38%), Positives = 358/623 (57%), Gaps = 22/623 (3%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAH 79
            T   VA  IS   A+  V   +NG++ DL  P+  + ++E++T ++  + AV  HS AH
Sbjct: 267 TTPYQVAAEISPERAESTVVAKVNGELWDLDRPLEGDSTLELLTFDNEEAQAVYWHSSAH 326

Query: 80  IMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQIEKKMQEIIARDSPFLK 138
           I+ EA++ ++    +  GP IE+GFYYD F  ++  SS EL+ +E   + II    PF +
Sbjct: 327 ILGEAME-LYYGGHLCYGPPIENGFYYDMFIGDRAVSSTELSALENICKTIIKEKQPFER 385

Query: 139 QYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFF 198
             +S E   E+F+  K  +K  IL         T+YR G   DLC+GPHVR TG++K   
Sbjct: 386 LEVSKEVLLEMFKYNK--FKCRILNEKVNTPTTTVYRCGPLIDLCKGPHVRHTGKIKTI- 442

Query: 199 KLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI 258
           K+ K +  YW G+     L RIYG ++   + +  +  F EE++ RDHRK+ +E +LF  
Sbjct: 443 KIFKNSSTYWEGNPEMETLQRIYGISFPDTKMMKTWEKFQEEAKNRDHRKIGKEQELFFF 502

Query: 259 AEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRAN 317
            +   G  F+  +G  I+ TL+ ++R +  + ++ E+ +P + +  LW+ SGHW  Y  N
Sbjct: 503 HDLSPGSCFFLPRGAFIYNTLMDFIREEYHRRNFTEVLSPNMYNSRLWETSGHWQHYSEN 562

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           MF      DT      FALKPMNCPGH  +F H  +S+RE+P+R A+FG ++RNE SG+L
Sbjct: 563 MFTFDIEKDT------FALKPMNCPGHCLIFAHRPRSWREMPIRFADFGVLHRNELSGTL 616

Query: 378 HGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGS 437
            GL RVR F QDDAH+FCT EQ+  E       + S+Y  FGF    + LSTRPE  +G 
Sbjct: 617 SGLTRVRRFQQDDAHIFCTVEQIEEEINGCLQFLQSVYSTFGF-SFQLNLSTRPENFLGE 675

Query: 438 DALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ 497
             LWD+AE  ++  L  ++     ++N     G+GAFYGPK +  +KDAIGR  QC TIQ
Sbjct: 676 VELWDEAEKQLQNSL--VEFGKPWKMNP----GDGAFYGPKIDIKIKDAIGRYHQCATIQ 729

Query: 498 VDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI 556
           +DF LP RFN  YV+    +K +PV+IHRA+ GS+ER I I+ EN+ G  P WLSP Q +
Sbjct: 730 LDFQLPIRFNLTYVSKDGDDKRNPVIIHRAILGSVERMIAILSENYGGKWPFWLSPRQVM 789

Query: 557 VTTITSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEAS 615
           V  +  +  +YA ++++         + D  +  T+N KIR   + +   I++ G+KE +
Sbjct: 790 VIPVGPTCEKYALQVSSAFFEEGFMADVDLDHSCTLNKKIRNAQLAQYNFILVVGEKEKT 849

Query: 616 ERSIGIRRFGSTTTQKVSLLDAI 638
             ++ +R   +    ++S+  AI
Sbjct: 850 NNAVNVRTRDNKIHGEISVTSAI 872


>gi|210615498|ref|ZP_03290625.1| hypothetical protein CLONEX_02841 [Clostridium nexile DSM 1787]
 gi|210150347|gb|EEA81356.1| hypothetical protein CLONEX_02841 [Clostridium nexile DSM 1787]
          Length = 657

 Score =  429 bits (1104), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 241/640 (37%), Positives = 363/640 (56%), Gaps = 27/640 (4%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           +K+T  DGS+K +    +  ++A  IS  LA+ A A  +NG+V DL   V E   + I+T
Sbjct: 4   MKITLKDGSVKEYAESKSVYEIALDISEGLARAACAGEVNGEVVDLRTVVSEDCELNILT 63

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
             D + LA +RH+ +H++AEAV+ ++PE ++AIGP I+ G+YYDF+   PFS+++L  IE
Sbjct: 64  ANDEKGLAALRHTASHVLAEAVKRLYPEAKLAIGPSIDTGYYYDFE-HAPFSNEDLETIE 122

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M++II   +   +  L   +A  L E K E YKVE++  +P    ++ YRQGE+ DLC
Sbjct: 123 KEMKKIIKEGAKIERFELPRAEAIALMEEKGEPYKVELINDLPEDSVISFYRQGEFVDLC 182

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+ ST  VK F KL+  +GAYWRG+ N  ML+RIYGTA++ + EL  ++  LE+ +K
Sbjct: 183 AGPHLMSTKGVKAF-KLISSSGAYWRGNENNKMLTRIYGTAYSKKDELKAHMEHLEDIKK 241

Query: 244 RDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKDD-----YEEINTP 297
           RDH KL REM+LF   +  G G+     KG  + QT    M+R I+D+     Y    TP
Sbjct: 242 RDHNKLGREMELFTTVDVIGQGLPLLMPKGAAMVQT----MQRWIEDEEERRGYMRTKTP 297

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +  + L+  S HW  Y+  MF +   D+  +    FAL+PM CP    V+    KSYR+
Sbjct: 298 LMAKKDLYVISDHWGHYKEGMFVL--GDEEKEGEEVFALRPMTCPFQYYVYKQSQKSYRD 355

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP R  E  +++RNE SG +HGL RVR FT  + H+    +Q+ +E     +L       
Sbjct: 356 LPCRYGETSTLFRNEDSGEMHGLTRVRQFTISEGHLVIRPDQVEDEFKGCVDLAKYCLTT 415

Query: 418 FGFEK-IMVKLS----TRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
            G E+ +  +LS       +K +G+  +WD+ E++M+ +LD ++      IN     GE 
Sbjct: 416 LGVEEDVTYRLSLADPDNMDKYLGTREMWDEVEDVMRKMLDHLE------INYTEETGEA 469

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           AFYGPK +   K+  G++    TIQ+D  L  RF+  +V+   EK  P +IHR   G  E
Sbjct: 470 AFYGPKLDIQAKNVYGKEDTMITIQLDMFLAERFDMTFVDKDGEKKRPYIIHRTAMGCYE 529

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
           R +  +IE + G  P WL P Q  V  I+    +YA ++AN L+ + +    D R E I 
Sbjct: 530 RTLAWLIEKYAGLFPTWLCPEQVRVLPISEKYHDYANKVANELRGNGVKCTVDERAEKIG 589

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIR-RFGSTTTQK 631
           YKIRE  + ++P +++ G KE  E  + +R R+     QK
Sbjct: 590 YKIRETRLDRVPYMLVVGAKEEEEGVVSVRSRYLGDEGQK 629


>gi|159037395|ref|YP_001536648.1| threonyl-tRNA synthetase [Salinispora arenicola CNS-205]
 gi|157916230|gb|ABV97657.1| threonyl-tRNA synthetase [Salinispora arenicola CNS-205]
          Length = 671

 Score =  429 bits (1104), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 246/628 (39%), Positives = 354/628 (56%), Gaps = 54/628 (8%)

Query: 44  NGKVCDLS-DPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIED 102
            G++ DL   PV E  +E +  + P  LAV+RHS AH++A+AVQ ++PE ++ IGP IE+
Sbjct: 45  QGQLRDLDWTPVEETVVEPVGIDTPDGLAVLRHSTAHVLAQAVQDLFPEAKLGIGPPIEN 104

Query: 103 GFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSH-EKARELFESKKEAYKVEI 161
           GFYYDF  ++PF  ++L ++EK+MQEII     F ++   + ++AR   E   E +K+E+
Sbjct: 105 GFYYDFAVDRPFQPEDLTKLEKRMQEIIKSGQRFRRRRFRNLDEARG--ELAAEPFKLEL 162

Query: 162 LE---SIPAKENVTLYRQGE---------------WFDLCRGPHVRSTGQVKKFFKLMKV 203
           +E          V     GE               W DLCRGPH+ +T ++   FKLM+ 
Sbjct: 163 IELKGDGLDSSQVMEVGGGELTSYDNLAADADKVCWSDLCRGPHLPNT-RLIGAFKLMRS 221

Query: 204 AGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-G 262
           A AYWRG    P L R+YGTAW T+ EL  YL  LEE+ +RDHRKL  ++DLF   E+ G
Sbjct: 222 AAAYWRGSEKNPQLQRVYGTAWPTRDELKAYLRLLEEAARRDHRKLGTDLDLFSFPEEIG 281

Query: 263 SGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA- 320
           SG+  +H KG  + +T+  Y+R R I++ ++ + TP +  + L+  SGH   Y   MF  
Sbjct: 282 SGLPVFHPKGGVLKRTMEDYVRARHIEEGFDYVGTPHISKEGLFHTSGHLPYYADGMFPP 341

Query: 321 --VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLH 378
             ++ AD        + LK MNCP H  ++    +SYRELP+RL EFGSVYR+E SG +H
Sbjct: 342 MHLEGAD--------YYLKAMNCPMHNLIYRSRGRSYRELPMRLFEFGSVYRDEKSGVIH 393

Query: 379 GLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR----PEKR 434
           GL RVRGFTQDD+H +CTKEQ   E   +   ++ + +DFG    +++LSTR    P+K 
Sbjct: 394 GLTRVRGFTQDDSHSYCTKEQAPAEIKHLLAFVLGLLQDFGITDFVLELSTRDDANPDKF 453

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL----GEGAFYGPKFEYILKDAIGRD 490
           VGS   W  A  +++          Q   +TG+ L    G  AFYGPK     KDAIGR 
Sbjct: 454 VGSAEDWATATAVLE----------QCARDTGLDLVPDPGGAAFYGPKISVQAKDAIGRT 503

Query: 491 WQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL 550
           WQ  TIQ DFN P+ F   Y  +   +  PVMIH A FGSIERFIG++ E++ G  P WL
Sbjct: 504 WQMSTIQYDFNQPAGFGLEYQAADGSRQRPVMIHCAKFGSIERFIGVLTEHYAGAFPAWL 563

Query: 551 SPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           +P+Q +   I     EY       L++  +  + D  ++ +  KIR    +KIP + I G
Sbjct: 564 APVQVVGIPIREDHTEYLDGFVAGLRAAGIRAQVDAGDDRMQKKIRTAQQQKIPFMAIAG 623

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAI 638
           D + +  ++  R    +    V + +A+
Sbjct: 624 DDDVAAGTVSFRYRDGSQRNGVPVAEAV 651


>gi|325912604|ref|ZP_08174987.1| threonine--tRNA ligase [Lactobacillus iners UPII 60-B]
 gi|325478025|gb|EGC81154.1| threonine--tRNA ligase [Lactobacillus iners UPII 60-B]
          Length = 643

 Score =  429 bits (1104), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 233/646 (36%), Positives = 368/646 (56%), Gaps = 23/646 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS K F    T  +VA SI+ SLAK AVA  +N ++  L   V  +  + IIT +
Sbjct: 5   ITLPDGSKKEFNHALTIKEVASSIATSLAKSAVAGKVNDEIRPLDFVVDTDARVAIITDK 64

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L V+R++ A +        +P V++    + EDGF+ D DKE    + EL  +EK+
Sbjct: 65  DEEGLQVLRNTAAFVFEMVASKQYPSVRLGTSELEEDGFFVDTDKEDQIKASELPDLEKE 124

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           MQ+I+        + +S  +  +LF  K + YK+E+L+     + V +Y+  ++ D    
Sbjct: 125 MQKIVKNGEKIEYKIVSKSELLDLF--KDDPYKLELLKE--EADEVAVYKLEDFVDFGFN 180

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
             + +TG++K F KL+ VAGAYW+G S+ PML RI+GTA+  + +L   L   E+ ++RD
Sbjct: 181 ALLMNTGKLKHF-KLLSVAGAYWQGKSSNPMLQRIFGTAFFKEADLKADLQRREDIKERD 239

Query: 246 HRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQH 303
           HR + R++DLF +  + G+G+ +W  KG  I + +  Y+  +++ D Y+ + TP +++  
Sbjct: 240 HRTIGRDLDLFFVDPKVGAGLPYWMPKGATIRRVIERYIIDKEVADGYQHVYTPVLMNLD 299

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
            ++ SGHW  YR +MF        + D     L+PMNCP H+ ++NH ++SYRELP+R+A
Sbjct: 300 AYKTSGHWAHYREDMFPPM----DMGDGEMLELRPMNCPSHIQIYNHHIRSYRELPIRIA 355

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           E G ++R E SG+L GL RVR  T +D H F   +Q+ +E  KI  LI+ +Y+DF     
Sbjct: 356 ELGMMHRYEKSGALSGLQRVREMTLNDGHTFVELDQVQSEFAKILKLIMEVYRDFDITDY 415

Query: 424 MVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
             +LS R     +K   +D +W+ ++ ++KG +D +       +      GE AFYGPK 
Sbjct: 416 YFRLSYRDPKNTDKYFANDEMWERSQKMLKGAMDDLG------LEYVEAEGEAAFYGPKL 469

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +   K A+G D    TIQ+DF LP RFN  YV    E+  PVM+HR + G++ERFI  + 
Sbjct: 470 DIQTKTALGNDETMSTIQLDFMLPERFNLSYVGKDGEEHRPVMVHRGIVGTMERFIAYLT 529

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           E +KG  P WL+P+Q  +  + + A  EYAQ + + L       E DFRNE + YKIRE 
Sbjct: 530 EIYKGAFPTWLAPLQVKIIPVNNDAHGEYAQNVKDQLMKLGFRSEVDFRNEKLGYKIREA 589

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
             +K+P  ++ GD E    S+ +R++GS   +  +L + +  L+ +
Sbjct: 590 QTQKVPYTLVLGDDELQHNSVNVRKYGSEDQESKALSEFVSELSAD 635


>gi|168064726|ref|XP_001784310.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162664141|gb|EDQ50872.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 685

 Score =  429 bits (1104), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 231/649 (35%), Positives = 371/649 (57%), Gaps = 25/649 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGS-DVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           IK+T PDG++++     T   DVA  IS+ LA  A+   +NG + D++ P+  + ++++ 
Sbjct: 50  IKITMPDGAVRDGKKWITSPMDVAREISQGLANSALIAEVNGVLWDMTRPLEGDCTLQLH 109

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE--DGFYYD--FDKEQPFSSDE 118
             E  +      HS AHI+ ++++  +   ++ IGP     +GFYYD  +        D+
Sbjct: 110 KFESDKGRDTFWHSSAHILGQSIEMTYG-CKLCIGPCTTRGEGFYYDAFYHGLTLTEKDD 168

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
             +I+ +  + +    PF +  ++ E+A E F   +  +KVEI+  +P  + +T+YR G 
Sbjct: 169 FGKIQAQANKAVKDKQPFERIEVTREQALEFF--AENPFKVEIINELPEDKTITVYRCGP 226

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLCRGPH+ ST  VK F   ++ + +YWRG ++R  L R+YG ++   + L +YL+ +
Sbjct: 227 LVDLCRGPHIPSTSHVKAF-ACLRASASYWRGRADRESLQRVYGISYPDNKLLKEYLHNV 285

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
           EE++KRDHRKL ++ +LF   E   G  F+   G +I+  L +++R +  K  YEE+ +P
Sbjct: 286 EEAKKRDHRKLGQQQELFFFHELSPGSCFFLPHGARIYNKLQAFIRDEYRKRGYEEVVSP 345

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  LW+ SGH  +Y+ NMF  +       + + F LKPMNCPGH  +F+H ++SYRE
Sbjct: 346 NMFNMQLWETSGHAANYKDNMFTFEV------EKQEFGLKPMNCPGHCLIFDHRVRSYRE 399

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+RLA+FG ++RNE SG+L GL RVR F QDDAH+FC + Q+  E     + +   Y  
Sbjct: 400 LPLRLADFGVLHRNELSGALSGLTRVRRFQQDDAHIFCMESQLLTEVKGALDFLEFAYGV 459

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF    ++LSTRPEK +G    W+ AE  ++  L+      Q  IN      +GAFYGP
Sbjct: 460 FGF-TFELELSTRPEKYLGEIETWNRAEKALEAALNAFGKPWQ--INE----ADGAFYGP 512

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFY-VNSHSEKCHPVMIHRAVFGSIERFIG 536
           K +  + DA+ R +QC TIQ+DF LP RFN  Y     +++  PV+IHRA+ GS+ER   
Sbjct: 513 KIDITVFDALKRKFQCATIQLDFQLPIRFNLSYSTEDEAKREKPVIIHRAILGSVERMFA 572

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           I++E++ G  P WLSP Q IV  ++     YA E+ + + +     E D  +  +  KIR
Sbjct: 573 ILLEHYAGKWPFWLSPRQCIVCPVSEKFTHYAVEVRDAINAAGYFCEADVTDRKLQKKIR 632

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           E  + +   I++ G++E S++ + IR   +      S+ + +    KE+
Sbjct: 633 EAQLAQFNYILVVGEEETSKKQVNIRTRDNVVHGTKSVTELLADFQKET 681


>gi|46108732|ref|XP_381424.1| hypothetical protein FG01248.1 [Gibberella zeae PH-1]
          Length = 745

 Score =  429 bits (1104), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 246/660 (37%), Positives = 363/660 (55%), Gaps = 39/660 (5%)

Query: 4   DIKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           DI ++ P+G   K      T   VA +IS+SL ++ V   ++G++ DL+ P+ +   +E 
Sbjct: 80  DIVISLPNGKEEKGTSWETTPGAVARNISKSLFERTVISRVDGELWDLTRPLEKSCKVEF 139

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIED--GFYYDFDK--EQPFSSD 117
           +  +      V  HS AHI+ EA +  +    +  GP  ED  GFYYD     EQ  + +
Sbjct: 140 LDFDHTEGKKVFWHSSAHILGEAAERRFG-CYLCNGPPTEDPPGFYYDMANMGEQSVTEE 198

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +   +E+    I+ +  PF +  ++ E+  E+FE   E  K  I + +P     T+YR G
Sbjct: 199 DKKALEQLSNSIVKQKQPFERLEMTKEELLEMFEYS-EYKKYFIQQRVPDGTKSTVYRCG 257

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
              DLCRGPHV +TG +K F  ++K + AYW GDS    + RI G ++  ++ L +Y +F
Sbjct: 258 PLIDLCRGPHVPTTGNIKAF-SVLKNSAAYWLGDSKNESVQRIAGVSFPDKKALEEYKHF 316

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINT 296
           L E+ KR+HRK+ ++  LF   E   G  F+   G +I+  L+  ++ +  K D+EE+ +
Sbjct: 317 LAEAAKRNHRKIGQDQKLFFFDEASPGSAFFLPHGVRIYNALMDLIKGEYQKRDFEEVMS 376

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +    LW+ SGHW  Y  NMF  +   +       F LKPMNCPGH  +F H   +Y+
Sbjct: 377 PNMYKADLWKTSGHWGHYEENMFTFEVEKEK------FGLKPMNCPGHCKIFAHSDVTYK 430

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +LP R+A+FG+++RNE SG+L GL RVR F QDDAH+FCT +Q+  E     + + S+Y 
Sbjct: 431 DLPWRMADFGTLHRNEFSGALSGLTRVRRFQQDDAHIFCTVDQIREEIESAFDFLSSVYG 490

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTI--KNSSQDRINTGVLLGEGAF 474
            FGF    +KLSTRPEK VG  A WD AE  ++  L++   K  ++   N     G+GAF
Sbjct: 491 IFGF-TFKLKLSTRPEKYVGDIATWDAAEKKLEEALESFAEKTGAKWEFNP----GDGAF 545

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK----------------C 518
           YGPK +  L DA+ R+ QCGT+Q+DFNLP RF   YV +  E                  
Sbjct: 546 YGPKIDIALFDALKREHQCGTMQLDFNLPRRFKLRYVANKGETGVSDGSNPEEDLPAGYA 605

Query: 519 HPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSH 578
            PVMIHRAV GS ER  GI+ E+F G  P WLSP Q +V  +  +A +YAQE+  + K+ 
Sbjct: 606 RPVMIHRAVLGSFERMFGILTEHFGGKWPFWLSPRQVLVVPVMPAANDYAQEVQKIFKAK 665

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
            L  + D  + T   KIR+  +++   I + G +E   R++ IR     +TQ    L AI
Sbjct: 666 GLYSDVDLSSNTFQKKIRKGQLEQFNFIFVVGAEEKESRTLNIRNRDDQSTQAKGELVAI 725


>gi|312875562|ref|ZP_07735563.1| threonine--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
 gi|311088816|gb|EFQ47259.1| threonine--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
          Length = 643

 Score =  429 bits (1104), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 233/646 (36%), Positives = 367/646 (56%), Gaps = 23/646 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS K F    T  +VA SI+ SLAK AVA  +N ++  L   V  +  + IIT +
Sbjct: 5   ITLPDGSKKEFNHALTIKEVASSIATSLAKSAVAGKVNDEIRPLDFVVDTDARVAIITDK 64

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L V+R++ A +        +P V++    + EDGF+ D DKE    + EL  +EK+
Sbjct: 65  DEEGLQVLRNTAAFVFEMVASKQYPSVRLGTSELEEDGFFVDTDKEDQIKASELPDLEKE 124

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           MQ+I+        + +S  +  +LF  K + YK+E+L+     + V +Y+  ++ D    
Sbjct: 125 MQKIVKNGEKIEYKIVSKSELLDLF--KDDPYKLELLKE--EADEVAVYKLEDFVDFGFN 180

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
             + +TG++K F KL+ VAGAYW+G S+ PML RI+GTA+    +L   L   E+ ++RD
Sbjct: 181 ALLMNTGKLKHF-KLLSVAGAYWQGKSSNPMLQRIFGTAFFKDADLKADLQRREDIKERD 239

Query: 246 HRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQH 303
           HR + R++DLF +  + G+G+ +W  KG  I + +  Y+  +++ D Y+ + TP +++  
Sbjct: 240 HRTIGRDLDLFFVDPKVGAGLPYWMPKGATIRRVIERYIIDKEVADGYQHVYTPVLMNLD 299

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
            ++ SGHW  YR +MF        + D     L+PMNCP H+ ++NH ++SYRELP+R+A
Sbjct: 300 AYKTSGHWAHYREDMFPPM----DMGDGEMLELRPMNCPSHIQIYNHHIRSYRELPIRIA 355

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           E G ++R E SG+L GL RVR  T +D H F   +Q+ +E  KI  LI+ +Y+DF     
Sbjct: 356 ELGMMHRYEKSGALSGLQRVREMTLNDGHTFVELDQVQSEFAKILKLIMEVYRDFDITDY 415

Query: 424 MVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
             +LS R     +K   +D +W+ ++ ++KG +D +       +      GE AFYGPK 
Sbjct: 416 YFRLSYRDPKNTDKYFANDEMWERSQKMLKGAMDDLG------LEYVEAEGEAAFYGPKL 469

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +   K A+G D    TIQ+DF LP RFN  YV    E+  PVM+HR + G++ERFI  + 
Sbjct: 470 DIQTKTALGNDETMSTIQLDFMLPERFNLSYVGKDGEEHRPVMVHRGIVGTMERFIAYLT 529

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           E +KG  P WL+P+Q  +  + + A  EYAQ + + L       E DFRNE + YKIRE 
Sbjct: 530 EIYKGAFPTWLAPLQVKIIPVNNDAHGEYAQNVKDQLMKLGFRAEVDFRNEKLGYKIREA 589

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
             +K+P  ++ GD E    S+ +R++GS   +  +L + +  L+ +
Sbjct: 590 QTQKVPYTLVLGDDELQHNSVNVRKYGSEDQESKALSEFVSELSAD 635


>gi|313837083|gb|EFS74797.1| threonyl-tRNA synthetase [Propionibacterium acnes HL037PA2]
 gi|314927888|gb|EFS91719.1| threonyl-tRNA synthetase [Propionibacterium acnes HL044PA1]
 gi|314971856|gb|EFT15954.1| threonyl-tRNA synthetase [Propionibacterium acnes HL037PA3]
          Length = 689

 Score =  429 bits (1103), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 235/644 (36%), Positives = 354/644 (54%), Gaps = 50/644 (7%)

Query: 36  KKAVAVAINGKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           +  VA+ ++G + DL   + +G+ +E +       L +IRHS  H+MA+AVQ ++PEV +
Sbjct: 37  RAVVAMRVDGNLVDLQRELHDGAEVEPVEATSEDGLNIIRHSATHVMAQAVQQLYPEVNL 96

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            IGP I DGFYYDF   +P + + L+++EK+M+ I+  +  F+++  + E ARE  E   
Sbjct: 97  GIGPFITDGFYYDFGNIEPVTPEVLSELEKRMKRIVKENQRFVRRVTTEESARE--ELAD 154

Query: 155 EAYKVEILESIP----------AKENVTLY----RQGE--WFDLCRGPHVRSTGQVKKFF 198
           + YK+E++ +                +T+Y    R GE  W DLCRGPHV ST  +   F
Sbjct: 155 QPYKLELIGTKGKGAEGASVEVGGGELTIYDNVHRNGEVAWKDLCRGPHVPSTKYLANAF 214

Query: 199 KLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI 258
            L K + AYW+GD     L RIYGTAW ++++L  Y   ++E+E+RDHRKL  E+DLF  
Sbjct: 215 ALTKFSAAYWKGDQANDQLQRIYGTAWASREDLVAYQQRIKEAERRDHRKLGAELDLFSF 274

Query: 259 AED-GSGVIFWHRKGWKIFQTLIS--YMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYR 315
            E+ G G++ +H KG  + + LI    + R ++  +  ++TP++    L+  SGH   Y 
Sbjct: 275 PEEIGPGLVVFHPKG-AMLRHLIEEHVVARHMEAGFVFVHTPEITKGGLFHTSGHLPYYA 333

Query: 316 ANMFAVKCAD-------DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV 368
             MF     D       +  +  + + LK MNCP H  +F    +SYRELP+R  E G  
Sbjct: 334 DTMFPPMLVDEERDEQGNVTRTGQEYYLKAMNCPMHNLIFRSRGRSYRELPLRFFEMGHD 393

Query: 369 YRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLS 428
           YR E SG +HGL R+RGF QDD+H +CT+EQ   E  K     +SI  DFG     ++LS
Sbjct: 394 YRYEKSGVVHGLTRMRGFAQDDSHTYCTREQAPGEIKKQIEFFLSILADFGLNDFYLELS 453

Query: 429 TRP------EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL----GEGAFYGPK 478
           TR       EK +GSD  W  A + +  V            NTG+ L    G  AFYGPK
Sbjct: 454 TREGGSAKEEKFIGSDEDWQAATDTLDQVCR----------NTGLQLVSDPGGAAFYGPK 503

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
               +KDAIGR WQ  TIQ DFN P RF+  Y  +      P+M+H A  GS+ERFIG++
Sbjct: 504 VSVQVKDAIGRTWQMSTIQYDFNQPERFDLEYAAADGTHQRPIMLHSAKLGSVERFIGVL 563

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
            E++ G  P+WLSP+Q  +  +  +  +Y  + A +L+S  + +ETD  ++    KIR  
Sbjct: 564 TEHYAGAFPVWLSPVQVRLVPVAEAFNDYVTKFAEVLESRGIRVETDLSSDRFGKKIRNA 623

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           S +K+P ++I G ++A   ++  R    +    V+  + + I+ 
Sbjct: 624 SKEKVPFVLIAGGEDAEAGAVSFRLRDGSQVNGVARDETVRIIA 667


>gi|189055088|dbj|BAG38072.1| unnamed protein product [Homo sapiens]
          Length = 711

 Score =  429 bits (1103), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 244/625 (39%), Positives = 355/625 (56%), Gaps = 25/625 (4%)

Query: 5   IKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEII 62
           IK+T PDG  +       T   +A  IS+ LA   V   +N  V DL  P+ E  ++E++
Sbjct: 71  IKVTLPDGKQVDAESWKTTPYQIACGISQGLADNTVIAKVNNVVWDLDRPLEEDCTLELL 130

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQ 121
             ED  + AV  HS AHIM EA++ ++    +  GP IE+GFYYD + +E   SS++ + 
Sbjct: 131 KFEDEEAQAVYWHSSAHIMGEAMERVYGGC-LCYGPPIENGFYYDMYLEEGGVSSNDFSS 189

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +E   ++II     F +  +  E    +F+  K  +K  IL         T+YR G   D
Sbjct: 190 LEALCKKIIKEKQAFERLEVKKETLLAMFKYNK--FKCRILNEKVNTPTTTVYRCGPLID 247

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHVR TG++K   K+ K +  YW G ++   L RIYG ++   + L ++  F EE+
Sbjct: 248 LCRGPHVRHTGKIKAL-KIHKNSSTYWEGKADMETLQRIYGISFPDPKMLKEWEKFQEEA 306

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVL 300
           + RDHRK+ R+ +L+   E   G  F+  KG  I+  LI ++R +  K  ++E+ TP + 
Sbjct: 307 KNRDHRKIGRDQELYFFHELSPGSCFFLPKGAYIYNALIEFIRSEYRKRGFQEVVTPNIF 366

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  LW  SGHW  Y  NMF+ +   +       FALKPMNCPGH  +F+H  +S+RELP+
Sbjct: 367 NSRLWMTSGHWQHYSENMFSFEVEKEL------FALKPMNCPGHCLMFDHRPRSWRELPL 420

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLA+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E     + + ++Y  FGF
Sbjct: 421 RLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRAVYSVFGF 480

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
               + LSTRPEK +G   +WD AE  ++  L+      +  +N+    G+GAFYGPK +
Sbjct: 481 -SFKLNLSTRPEKFLGDIEVWDQAEKQLENSLNEFGEKWE--LNS----GDGAFYGPKID 533

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH--SEKCHPVMIHRAVFGSIERFIGIM 538
             +KDAIGR  QC TIQ+DF LP RFN  YV SH   +K  PV++HRA+ GS+ER I I+
Sbjct: 534 IQIKDAIGRYHQCATIQLDFQLPIRFNLTYV-SHDGDDKKRPVIVHRAILGSVERMIAIL 592

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIRE 597
            EN+ G  P WLSP Q +V  +  +  EYAQ++           + D     T+N KIR 
Sbjct: 593 TENYGGKWPFWLSPRQVMVVPVGPTCDEYAQKVRQQFHDAKFMADIDLDPGCTLNKKIRN 652

Query: 598 HSIKKIPIIIICGDKEASERSIGIR 622
             + +    ++ G+KE    ++ IR
Sbjct: 653 AQLAQYNFTLVVGEKEKISGTVNIR 677


>gi|194206357|ref|XP_001491149.2| PREDICTED: similar to threonyl-tRNA synthetase-like 2 [Equus
           caballus]
          Length = 754

 Score =  429 bits (1103), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 237/623 (38%), Positives = 358/623 (57%), Gaps = 22/623 (3%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAH 79
            T   VA  IS+ LA+  V   +NG++ DL  P+  + ++E++  +   + AV  HS AH
Sbjct: 131 TTPYQVAAEISQELAESTVVAKVNGELWDLDRPLEGDSTLELLMFDSEEAQAVYWHSSAH 190

Query: 80  IMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQIEKKMQEIIARDSPFLK 138
           I+ EA++ ++    +  GP IE+GFYYD F +++  SS EL+ +E   + II     F +
Sbjct: 191 ILGEAME-LYYGGHLCYGPPIENGFYYDMFIEDRAVSSTELSALEGMCKTIIKEKQAFER 249

Query: 139 QYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFF 198
             +S E   E+F+  K  +K  IL         T+YR G   DLC+GPHVR TG++K   
Sbjct: 250 LEVSKEVLLEMFKYNK--FKCRILNEKVNTPTTTVYRCGPLIDLCKGPHVRHTGKIKAI- 306

Query: 199 KLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI 258
           K+ K +  YW G+     L RIYG ++   + +  +  F EE++ RDHRK+ +E +LF  
Sbjct: 307 KIFKNSSTYWEGNPEMETLQRIYGISFPDNKMMKNWEKFQEEAKNRDHRKIGKEQELFFF 366

Query: 259 AEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRAN 317
            +   G  F+  +G  I+ TL+ ++R +  + ++ E+ +P + +  LW+ SGHW  Y  N
Sbjct: 367 HDLSPGSCFFLPRGAFIYNTLMDFIREEYHQRNFTEVLSPNMYNSKLWEASGHWQHYSEN 426

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           MF      DT      FALKPMNCPGH  +F H  +S+RE+P+R A+FG ++RNE SG+L
Sbjct: 427 MFTFDIEKDT------FALKPMNCPGHCLMFAHRPRSWREMPIRFADFGVLHRNELSGTL 480

Query: 378 HGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGS 437
            GL RVR F QDDAH+FCT EQ+  E       + S+Y  FGF    + LSTRPE  +G 
Sbjct: 481 SGLTRVRRFQQDDAHIFCTVEQIEEEIKGCLQFLQSVYSTFGF-SFQLNLSTRPENFLGE 539

Query: 438 DALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ 497
             LWD+AE  ++  L  ++     ++N     G+GAFYGPK +  +KDAIGR  QC TIQ
Sbjct: 540 IGLWDEAEKQLQNSL--MEFGKPWKMNP----GDGAFYGPKIDIKIKDAIGRYHQCATIQ 593

Query: 498 VDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI 556
           +DF LP RFN  YV+    +K +PV+IHRA+ GS+ER I I+ EN+ G  P WLSP Q +
Sbjct: 594 LDFQLPIRFNLTYVSKDGDDKKNPVIIHRAILGSVERMIAILSENYGGKWPFWLSPRQVM 653

Query: 557 VTTITSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEAS 615
           V  +  +  +YA +++N         + D  +  T+N KIR   + +   I++ G+KE +
Sbjct: 654 VIPVGPTCEKYALQVSNEFFEEGFMADVDLDHSCTLNKKIRNAQLAQYNFILVVGEKEKT 713

Query: 616 ERSIGIRRFGSTTTQKVSLLDAI 638
             ++ +R   +    ++S+  AI
Sbjct: 714 NNAVNVRTRDNKIHGEISVTSAI 736


>gi|224062355|ref|XP_002195014.1| PREDICTED: similar to probable threonyl-tRNA synthetase 2,
           cytoplasmic [Taeniopygia guttata]
          Length = 719

 Score =  429 bits (1103), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 239/645 (37%), Positives = 372/645 (57%), Gaps = 23/645 (3%)

Query: 5   IKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           IK+T+ DG +++      T   +A  IS+ LA  AV   +NG++ DL  P+  + ++E++
Sbjct: 79  IKITWTDGETVEGESWKTTPYQLAVGISQVLASNAVIAKVNGELWDLDRPLEGDCTLELL 138

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQ 121
           T ++  + AV  HS AHI+ EA++  +    +  GP IE+GF+YD + +++  SS E   
Sbjct: 139 TFDNEEAKAVYWHSSAHILGEAMEGYFGGC-LCYGPPIENGFHYDMYIEDRSVSSTEFPL 197

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +E + + II     F +  +  E   ++F+  K  +K  IL         T+YR G   D
Sbjct: 198 LENRCKNIIKEKQAFERLEVKKEILLDMFKYNK--FKCRILNEKVKTPTTTVYRCGPLID 255

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LC+GPHVR TG++K   K++K +  YW G S+   L RIYG ++   + + ++    EE+
Sbjct: 256 LCKGPHVRHTGKIKAL-KIIKSSSTYWEGKSDMETLQRIYGISFPDNKMMKEWEKIQEEA 314

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
           + RDHRK+ +E +LF   +   G  F+  +G  ++ TL+ ++R + +  ++ E+ +P V 
Sbjct: 315 KNRDHRKIGKEQELFFFHDLSPGSCFFLPRGAFLYNTLVDFIRGEYRRRNFTEVVSPNVF 374

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  LW+ SGHW  Y  NMF+ +   +T      FA+KPMNCPGH  +F H  +S+RELP+
Sbjct: 375 NSKLWEASGHWQHYSENMFSFEVEKET------FAIKPMNCPGHCLMFAHRPRSWRELPL 428

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLA+FG ++RNE SG+L GL RVR F QDDAH+FCT EQ+  E     + + S+Y  FGF
Sbjct: 429 RLADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCTMEQIEEEIKDCLDFLKSVYAVFGF 488

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
               + LSTRPE  +G   +WD AE  ++  L+      Q  +N     G+GAFYGPK +
Sbjct: 489 -TFQLHLSTRPENYLGDLEIWDHAEKQLQNSLNNF--GEQWNLNP----GDGAFYGPKID 541

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIGIMI 539
             +KDAIGR  QC TIQ+DF LP RFN  YV     +K  PV+IHRA+ GS+ER I I+ 
Sbjct: 542 IKIKDAIGRYHQCATIQLDFQLPIRFNLTYVGKDGDDKKRPVIIHRAILGSVERMIAILA 601

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF-RNETINYKIREH 598
           EN+ G  P WLSP Q +V  +  ++ +YAQ++ +         + D  ++ T+N KIR  
Sbjct: 602 ENYGGKWPFWLSPRQVMVVPVGPASEQYAQQVCDQFFEAGFMSDVDLDQSCTLNKKIRNA 661

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            + +   I++ G+KE +  ++ +R   +    ++S+   I  L K
Sbjct: 662 QLAQYNFILVVGEKEKANNAVNVRTRDNKVHGEISVSSTIEKLKK 706


>gi|328907347|gb|EGG27113.1| threonine--tRNA ligase [Propionibacterium sp. P08]
          Length = 684

 Score =  429 bits (1103), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 233/643 (36%), Positives = 353/643 (54%), Gaps = 48/643 (7%)

Query: 36  KKAVAVAINGKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           +  VA+ ++G + DL   + +G+ +E +       L +IRHS  H+MA+AVQ ++PEV +
Sbjct: 32  RAVVAMRVDGNLVDLQRELHDGAEVEPVEATSEDGLNIIRHSATHVMAQAVQQLYPEVNL 91

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            IGP I DGFYYDF   +P + + L+++EK+M+ I+  +  F+++  + E ARE  E   
Sbjct: 92  GIGPFITDGFYYDFGNIEPVTPEVLSELEKRMKRIVKENQRFVRRVTTEESARE--ELAD 149

Query: 155 EAYKVEILESIP----------AKENVTLY----RQGE--WFDLCRGPHVRSTGQVKKFF 198
           + YK+E++ +                +T+Y    R GE  W DLCRGPHV ST  +   F
Sbjct: 150 QPYKLELIGTKGKGAEGASVEVGGGELTIYDNVHRNGEVAWKDLCRGPHVPSTKYLANAF 209

Query: 199 KLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI 258
            L K + AYW+GD     L RIYGTAW ++++L  Y   ++E+E+RDHRKL  E+DLF  
Sbjct: 210 ALTKFSAAYWKGDQANDQLQRIYGTAWASREDLVAYQQRIKEAERRDHRKLGAELDLFSF 269

Query: 259 AED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
            E+ G G++ +H KG  +   +  ++  R ++  +  ++TP++    L+  SGH   Y  
Sbjct: 270 PEEIGPGLVVFHPKGAMLRHLIEEHVVARHMEAGFVFVHTPEITKGGLFHTSGHLPYYAD 329

Query: 317 NMFAVKCAD-------DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVY 369
            MF     D       +  +  + + LK MNCP H  +F    +SYRELP+R  E G  Y
Sbjct: 330 TMFPPMLVDEERDEQGNVTRTGQEYYLKAMNCPMHNLIFRSRGRSYRELPLRFFEMGHDY 389

Query: 370 RNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
           R E SG +HGL R+RGF QDD+H +CT+EQ   E  K     +SI  DFG     ++LST
Sbjct: 390 RYEKSGVVHGLTRMRGFAQDDSHTYCTREQAPGEIKKQIEFFLSILADFGLNDFYLELST 449

Query: 430 RP------EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL----GEGAFYGPKF 479
           R       EK +GSD  W  A + +  V            NTG+ L    G  AFYGPK 
Sbjct: 450 REGGSAKEEKFIGSDEDWQAATDTLDQVCR----------NTGLQLVSDPGGAAFYGPKV 499

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
              +KDAIGR WQ  TIQ DFN P RF+  Y  +      P+M+H A  GS+ERFIG++ 
Sbjct: 500 SVQVKDAIGRTWQMSTIQYDFNQPERFDLEYAAADGTHQRPIMLHSAKLGSVERFIGVLT 559

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E++ G  P+WLSP+Q  +  +  +  +Y  + A +L+S  + +ETD  ++    KIR  S
Sbjct: 560 EHYAGAFPVWLSPVQVRLVPVAEAFNDYVTKFAEVLESRGIRVETDLSSDRFGKKIRNAS 619

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +K+P ++I G ++A   ++  R    +    V+  + + I+ 
Sbjct: 620 KEKVPFVLIAGGEDAEAGAVSFRLRDGSQVNGVARDETVRIIA 662


>gi|313792096|gb|EFS40197.1| threonyl-tRNA synthetase [Propionibacterium acnes HL110PA1]
 gi|313801952|gb|EFS43186.1| threonyl-tRNA synthetase [Propionibacterium acnes HL110PA2]
 gi|313812897|gb|EFS50611.1| threonyl-tRNA synthetase [Propionibacterium acnes HL025PA1]
 gi|313838778|gb|EFS76492.1| threonyl-tRNA synthetase [Propionibacterium acnes HL086PA1]
 gi|314962753|gb|EFT06853.1| threonyl-tRNA synthetase [Propionibacterium acnes HL082PA1]
 gi|315077970|gb|EFT50021.1| threonyl-tRNA synthetase [Propionibacterium acnes HL053PA2]
 gi|327453186|gb|EGE99840.1| threonyl-tRNA synthetase [Propionibacterium acnes HL092PA1]
          Length = 689

 Score =  429 bits (1103), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 239/644 (37%), Positives = 353/644 (54%), Gaps = 50/644 (7%)

Query: 36  KKAVAVAINGKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           +  VA+ ++G + DL   + +G+ +E +       L +IRHS  H+MA+AVQ ++PEV +
Sbjct: 37  RAVVAMRVDGNLVDLQRELHDGAEVEPVEATSEDGLNIIRHSATHVMAQAVQQLYPEVNL 96

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            IGP I DGFYYDF   +P + + L+++EK+M+ I+  +  F+++  + E ARE  E   
Sbjct: 97  GIGPFITDGFYYDFGNIEPVTPEVLSELEKRMKRIVKENQRFVRRVTTEESARE--ELAD 154

Query: 155 EAYKVEILESIP----------AKENVTLY----RQGE--WFDLCRGPHVRSTGQVKKFF 198
           + YK+E++ +                +T+Y    R GE  W DLCRGPHV ST  +   F
Sbjct: 155 QPYKLELIGTKGKGAEGASVEVGGGELTIYDNVRRNGEVAWKDLCRGPHVPSTKYLANTF 214

Query: 199 KLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI 258
            L K + AYW+GD     L RIYGTAW +++ L  Y   ++E+E+RDHRKL  E+DLF  
Sbjct: 215 ALTKFSAAYWKGDQANDQLQRIYGTAWASREGLAAYQQRIKEAERRDHRKLGAELDLFSF 274

Query: 259 AED-GSGVIFWHRKGWKIFQTLIS--YMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYR 315
            E+ G G++ +H KG  + + LI    + R ++  +  ++TP++    L+  SGH   Y 
Sbjct: 275 PEEIGPGLVVFHPKG-AMLRHLIEEHVIARHMEAGFNFVHTPEITKGGLFHTSGHLPYYA 333

Query: 316 ANMFAVKCAD-------DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV 368
             MF     D       +  +  + + LK MNCP H  +F    +SYRELP+R  E G  
Sbjct: 334 DTMFPPMLVDEERDEEGNVTRAGQEYYLKAMNCPMHNLIFRSRGRSYRELPLRFFEMGHD 393

Query: 369 YRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLS 428
           YR E SG +HGL R+RGF QDD+H +CT+EQ   E  K     +SI  DFG     ++LS
Sbjct: 394 YRYEKSGVVHGLTRMRGFAQDDSHTYCTREQAPGEIKKQIEFFLSILADFGLNDFYLELS 453

Query: 429 TR------PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL----GEGAFYGPK 478
           TR       EK +GSD  W  A +     LD +  S      TG+ L    G  AFYGPK
Sbjct: 454 TRESDSAKKEKFIGSDEDWQVATD----TLDQVCRS------TGLQLVPDPGGAAFYGPK 503

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
               ++DAIGR WQ  TIQ DFN P RF+  Y  + S    P+M+H A  GS+ERFIG++
Sbjct: 504 VSVQVRDAIGRTWQMSTIQYDFNQPERFDLEYAAADSTHQRPIMLHSAKLGSVERFIGVL 563

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
            E++ G  P+WLSP+Q  +  +  +  +Y    A +L S  + +ETD  ++    KIR  
Sbjct: 564 TEHYAGAFPVWLSPVQVRLVPVAEAFNDYVTGFAEVLGSRGIRVETDLSSDRFGKKIRNA 623

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           S  K+P I+I G ++A   ++  R    +    V L +A+ I+ 
Sbjct: 624 SKDKVPFILIAGGEDAEAGAVSFRLRDGSQVNGVVLDEAVRIIA 667


>gi|320093816|ref|ZP_08025661.1| threonine--tRNA ligase [Actinomyces sp. oral taxon 178 str. F0338]
 gi|319979249|gb|EFW10747.1| threonine--tRNA ligase [Actinomyces sp. oral taxon 178 str. F0338]
          Length = 669

 Score =  429 bits (1102), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 231/633 (36%), Positives = 349/633 (55%), Gaps = 34/633 (5%)

Query: 36  KKAVAVAINGKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           +  VA+ ++G   DL   +  G+ +E I  + P  L ++RHS  H++A+AVQ ++P+V +
Sbjct: 29  RSVVAIKVDGAPRDLDTELEAGTRVEAIALDSPDGLDILRHSATHVLAQAVQDVFPDVDL 88

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            IGP I DGFYYDF      + + L  +EK+M+ I+     F+++ +S ++AR   E   
Sbjct: 89  GIGPFITDGFYYDFGNIDAVTPELLRDLEKRMKRIVKEGQRFVRREISEDEAR--LELAD 146

Query: 155 EAYKVEILESIP----------AKENVTLY----RQG--EWFDLCRGPHVRSTGQVKKFF 198
           + YK+E++ +                +T+Y    R G   W DLCRGPH+ ST  +   F
Sbjct: 147 QPYKLELVTTKGKGAEGASVEVGGGGLTMYDNVRRDGTVAWKDLCRGPHLPSTKLIGNGF 206

Query: 199 KLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI 258
            L K + AYW+GD N   L RIYGTAW ++ +L  Y   L+E+E+RDHR+L  E+DLF  
Sbjct: 207 ALTKSSAAYWKGDQNGDQLQRIYGTAWASKDDLVAYQERLKEAERRDHRRLGAELDLFSF 266

Query: 259 AED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
            E+ G G+  +H KG  + + +  Y+R   I + ++ + TP +    L+  SGH   Y  
Sbjct: 267 PEEIGPGLPVFHPKGGVLKRVMEDYVREAHIANGFQYVGTPHISKAELFHTSGHLPYYAD 326

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            MF     DD   + + + LK MNCP H  +F    +SYRELP+R  EFG+VYRNE SG 
Sbjct: 327 GMF--PPMDD---EGQAYYLKAMNCPMHNLIFRSRGRSYRELPLRFFEFGTVYRNEKSGV 381

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE---- 432
           L GL RVR  TQDD+H +CT EQ   E   +   ++++ KDFG E   +++STR E    
Sbjct: 382 LQGLTRVRSITQDDSHSYCTPEQAPGEVRHLLTFVLTLLKDFGMEDFYLEVSTRDEDGAK 441

Query: 433 --KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRD 490
             K +GSD  W DA  I+  +       +  R+      G  AFYGPK     KDAI R 
Sbjct: 442 KDKFIGSDEQWADATRILADIAAECAQENGLRVVDDP--GGAAFYGPKISVQAKDAIRRT 499

Query: 491 WQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL 550
           WQ  TIQ DFN P RF   Y  +   +  PVMIH A FG+IERFIG++ E++ G  P WL
Sbjct: 500 WQMSTIQYDFNQPHRFGLEYTAADGARHEPVMIHSAKFGAIERFIGVLTEHYAGAFPAWL 559

Query: 551 SPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           +P+Q  +  + S+  +Y +E+A  L+   + +ETD  ++    KIR  + +K+P  +I G
Sbjct: 560 APVQVRLVPVASAFDDYVEEVAAKLRERGIRVETDLSDDRFGKKIRNAAKEKVPFTLIAG 619

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            ++A   ++  R    +    + +  A+ ++ +
Sbjct: 620 GEDAEAGAVSFRLRDGSQHNGIPVDRAVELIAR 652


>gi|224099691|ref|XP_002311580.1| predicted protein [Populus trichocarpa]
 gi|222851400|gb|EEE88947.1| predicted protein [Populus trichocarpa]
          Length = 678

 Score =  429 bits (1102), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 231/630 (36%), Positives = 363/630 (57%), Gaps = 25/630 (3%)

Query: 1   MPSD-IKLTFPDGSIKNFPV-HATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG- 57
           +P D IK+T PDG++K      ++  D+A+ I +S+A  A+   +NG + D++ P+ +  
Sbjct: 39  LPHDSIKITLPDGTVKEGKRWESSPMDIAKEIGKSVAGNALISQVNGVLWDMNRPLEDDC 98

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE--DGFYYD-FDKEQPF 114
            ++I   E         HS AHI+ +A++  +   ++ IGP     +GFYYD F  E   
Sbjct: 99  ELKIFNFESDEGRDTFWHSSAHILGQALEMEYG-CKLCIGPCTTRGEGFYYDAFYGELGL 157

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
           + D   +I+    + +A   PF +  +S E+A E+F      +KVEI++ +PA + +T+Y
Sbjct: 158 NDDHFKKIDAAALKAVAEKQPFERIEVSREQALEMFSDNN--FKVEIIKDLPADKTITVY 215

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
           R G   DLCRGPH+ +T  VK     +K + AYWRG+ +R  L R+YG ++  ++ L +Y
Sbjct: 216 RCGPLVDLCRGPHIPNTSFVKAL-ACLKASSAYWRGNRDRESLQRVYGISYPDKKRLQEY 274

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEE 293
             FLEE++K DHR L  + +LF       G  F+   G +++  L+ +++ +  K  YEE
Sbjct: 275 KQFLEEAKKYDHRLLGIKQELFFCHPLSPGSWFFLPHGTRVYNKLMQFIKDEYRKRGYEE 334

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           + +P + +  LW+ SGH  +Y+ NMF ++  +      + F LKPMNCPGH  +F H ++
Sbjct: 335 VKSPNIFNMKLWETSGHAANYKENMFLLEIEN------QEFGLKPMNCPGHCLMFQHRVR 388

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYRELP+RLA+FG+++RNE SG+L GL RVR F QDDAH+FC K Q+ +E   +   I  
Sbjct: 389 SYRELPLRLADFGALHRNEASGALTGLTRVRRFQQDDAHIFCRKSQIKDEVRGVLEFIDY 448

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
            Y  FGF    +KLSTRPEK +G    WD+AE  +   LD      +      +  G+GA
Sbjct: 449 TYGKFGF-TYELKLSTRPEKYLGVLETWDEAEKALTEALDEFGKPWK------IDEGDGA 501

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH-PVMIHRAVFGSIE 532
           FYGPK +  + DA+ R +QC T+Q+DF LP RF   Y      +   PVMIHRA+ GS+E
Sbjct: 502 FYGPKIDISVSDALKRKFQCATLQLDFQLPDRFKLEYSAEDEARSEAPVMIHRAILGSVE 561

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
           R   I++E++KG  P WLSP QAIV  ++  +  YA ++ + +      ++ D  +  I 
Sbjct: 562 RMFAILLEHYKGKWPFWLSPRQAIVCPVSEKSQSYALQVRDQIHEAGYYVDVDATDRKIQ 621

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIR 622
            K+RE  + +   I++ G++E+    + +R
Sbjct: 622 KKVREAQLAQYNYILVVGEEESKTGQVSVR 651


>gi|289425232|ref|ZP_06427009.1| threonine--tRNA ligase [Propionibacterium acnes SK187]
 gi|289154210|gb|EFD02898.1| threonine--tRNA ligase [Propionibacterium acnes SK187]
          Length = 684

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 239/644 (37%), Positives = 353/644 (54%), Gaps = 50/644 (7%)

Query: 36  KKAVAVAINGKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           +  VA+ ++G + DL   + +G+ +E +       L +IRHS  H+MA+AVQ ++PEV +
Sbjct: 32  RAVVAMRVDGNLVDLQRELHDGAEVEPVEATSEDGLNIIRHSATHVMAQAVQQLYPEVNL 91

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            IGP I DGFYYDF   +P + + L+++EK+M+ I+  +  F+++  + E ARE  E   
Sbjct: 92  GIGPFITDGFYYDFGNIEPVTPEVLSELEKRMKRIVKENQRFVRRVTTEESARE--ELAD 149

Query: 155 EAYKVEILESIP----------AKENVTLY----RQGE--WFDLCRGPHVRSTGQVKKFF 198
           + YK+E++ +                +T+Y    R GE  W DLCRGPHV ST  +   F
Sbjct: 150 QPYKLELIGTKGKGAEGASVEVGGGELTIYDNVRRNGEVAWKDLCRGPHVPSTKYLANTF 209

Query: 199 KLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI 258
            L K + AYW+GD     L RIYGTAW +++ L  Y   ++E+E+RDHRKL  E+DLF  
Sbjct: 210 ALTKFSAAYWKGDQANDQLQRIYGTAWASREGLAAYQQRIKEAERRDHRKLGAELDLFSF 269

Query: 259 AED-GSGVIFWHRKGWKIFQTLIS--YMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYR 315
            E+ G G++ +H KG  + + LI    + R ++  +  ++TP++    L+  SGH   Y 
Sbjct: 270 PEEIGPGLVVFHPKG-AMLRHLIEEHVIARHMEAGFNFVHTPEITKGGLFHTSGHLPYYA 328

Query: 316 ANMFAVKCAD-------DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV 368
             MF     D       +  +  + + LK MNCP H  +F    +SYRELP+R  E G  
Sbjct: 329 DTMFPPMLVDEERDEEGNVTRAGQEYYLKAMNCPMHNLIFRSRGRSYRELPLRFFEMGHD 388

Query: 369 YRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLS 428
           YR E SG +HGL R+RGF QDD+H +CT+EQ   E  K     +SI  DFG     ++LS
Sbjct: 389 YRYEKSGVVHGLTRMRGFAQDDSHTYCTREQAPGEIKKQIEFFLSILADFGLNDFYLELS 448

Query: 429 TR------PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL----GEGAFYGPK 478
           TR       EK +GSD  W  A +     LD +  S      TG+ L    G  AFYGPK
Sbjct: 449 TRESDSAKKEKFIGSDEDWQVATD----TLDQVCRS------TGLQLVPDPGGAAFYGPK 498

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
               ++DAIGR WQ  TIQ DFN P RF+  Y  + S    P+M+H A  GS+ERFIG++
Sbjct: 499 VSVQVRDAIGRTWQMSTIQYDFNQPERFDLEYAAADSTHQRPIMLHSAKLGSVERFIGVL 558

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
            E++ G  P+WLSP+Q  +  +  +  +Y    A +L S  + +ETD  ++    KIR  
Sbjct: 559 TEHYAGAFPVWLSPVQVRLVPVAEAFNDYVTGFAEVLGSRGIRVETDLSSDRFGKKIRNA 618

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           S  K+P I+I G ++A   ++  R    +    V L +A+ I+ 
Sbjct: 619 SKDKVPFILIAGGEDAEAGAVSFRLRDGSQVNGVVLDEAVRIIA 662


>gi|149409915|ref|XP_001508543.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus]
          Length = 719

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 244/624 (39%), Positives = 357/624 (57%), Gaps = 23/624 (3%)

Query: 5   IKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           IK+T PDG  +       T   +A  IS+ LA   V   +N  V DL  P+  + S+E++
Sbjct: 79  IKVTLPDGKQVDAESWKTTPYQIACGISQGLADNTVIAKVNKVVWDLDRPLEGDCSLELL 138

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQP-FSSDELAQ 121
             +D  + AV  HS AHIM EA++ ++    +  GP IE+GFYYD   E    SS++ A 
Sbjct: 139 KFDDEEAQAVYWHSSAHIMGEAMERVYGGC-LCYGPPIENGFYYDMYLENGGVSSNDFAV 197

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +E   ++I+     F +  +  E   E+F+  K  +K  IL         T+YR G   D
Sbjct: 198 LESLCKKIMKEKQLFERLEVKKETLLEMFKYNK--FKCRILNEKVNTPTTTVYRCGPLID 255

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHVR TG++K   K+ K +  YW G ++   L R+YG ++   + L ++  F EE+
Sbjct: 256 LCRGPHVRHTGKIKTL-KIHKNSSTYWEGKADMETLQRVYGISFPDPKLLKEWEKFQEEA 314

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVL 300
           + RDHRK+ R+ +L+   E   G  F+  KG  I+ TLI ++R +  K  ++E+ TP + 
Sbjct: 315 KNRDHRKIGRDQELYFFHELSPGSCFFLPKGAYIYNTLIEFIRSEYRKRGFQEVVTPNIY 374

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  LW  SGHW  Y  NMF+ +   +       FALKPMNCPGH  +F+H  +S+RELP+
Sbjct: 375 NSKLWLTSGHWQHYSENMFSFEVEKEI------FALKPMNCPGHCLMFDHRPRSWRELPL 428

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLA+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+  E     + + ++Y  FGF
Sbjct: 429 RLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEEEIKSCLDFLKTVYDVFGF 488

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
               + LSTRPEK +G   +W+ AE  ++  L  I+   +  +N     G+GAFYGPK +
Sbjct: 489 -SFKLNLSTRPEKFLGDIEVWNQAEKQLENSL--IEFGEKWELNP----GDGAFYGPKID 541

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIGIMI 539
             +KDAIGR  QC TIQ+DF LP RFN  +V+    +K  PV++HRA+ GS+ER I I+ 
Sbjct: 542 IQIKDAIGRYHQCATIQLDFQLPIRFNLTFVSHDGDDKKRPVIVHRAILGSVERMIAILT 601

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIREH 598
           ENF G  PLWLSP Q +V  +  +  +YAQ++        L  + D     T+N KIR  
Sbjct: 602 ENFGGKWPLWLSPRQVMVVPVGPTCDDYAQKVRQQFHDAQLMTDVDLDPGCTLNKKIRNA 661

Query: 599 SIKKIPIIIICGDKEASERSIGIR 622
            + +   I++ G+KE +  ++ IR
Sbjct: 662 QLAQYNFILVVGEKEKTSGTVNIR 685


>gi|325263251|ref|ZP_08129986.1| threonine--tRNA ligase [Clostridium sp. D5]
 gi|324031644|gb|EGB92924.1| threonine--tRNA ligase [Clostridium sp. D5]
          Length = 653

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 241/633 (38%), Positives = 371/633 (58%), Gaps = 27/633 (4%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K+T  DGS+K +    T  D+A  IS  LA+ A A  I+G+  DL   + ++ ++ I+T
Sbjct: 1   MKITLKDGSVKEYAESKTIIDIAFDISEGLARAACAGEIDGETADLRTLIEKDCTLNILT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
             D   L V+RH+C+H++AEAV++++P+ ++AIGP I+ G+YYDFD   PFS ++L +IE
Sbjct: 61  ARDEAGLRVVRHTCSHVLAEAVKNLFPDAKLAIGPAIDTGYYYDFDA-APFSREDLDKIE 119

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M++II + +   K  L  E+A    E K E YKVE++  +P    ++ YRQG++ DLC
Sbjct: 120 KEMKKIIKKGAKLEKFTLPREEAIAFMEEKGEPYKVELIRDLPEDSVISFYRQGDFVDLC 179

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+ ST  +K F KL   +GAYWRGDSN+ ML RIYG+A+ T+ EL +YL +LEE +K
Sbjct: 180 AGPHLMSTKGIKAF-KLTSSSGAYWRGDSNKAMLQRIYGSAFATKDELNEYLQYLEEVKK 238

Query: 244 RDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKDD--YEEINTPQVL 300
           RDH KL REM+LF   +  G G+     KG KI QTL  ++  +  ++  Y    TP + 
Sbjct: 239 RDHNKLGREMELFTTVDVIGQGLPLLMPKGAKIIQTLQRWIEDEEDNNWGYIRTKTPLMA 298

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
              L+Q SGHWD Y+  MF +    D   +   FAL+PM CP    V+    KSYR+LP+
Sbjct: 299 KSDLYQISGHWDHYKDGMFVLG---DEETNKEVFALRPMTCPFQYYVYKASQKSYRDLPL 355

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM---FNECLKIHNLIISIYKD 417
           R +E  +++RNE SG +HGL RVR FT  + H+    +QM   F  CL +    ++    
Sbjct: 356 RYSETSTLFRNEDSGEMHGLTRVRQFTISEGHLIVRPDQMVEEFKGCLALAKKCLTT--- 412

Query: 418 FGFEK-IMVKLST----RPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
            G +  +   LS       EK +G   +W++ E  ++ +L  ++    +        GE 
Sbjct: 413 LGLQDDVTYHLSKWDPDNTEKYIGDAEVWNETEGHIRNILTELEVPFVEDA------GEA 466

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           AFYGPK +   K+  G++    TIQ D  L  +F+ +Y++ + +K  P +IHR   G  E
Sbjct: 467 AFYGPKVDINAKNVYGKEDTMITIQWDALLAEQFDMYYIDQNGDKVRPYIIHRTSIGCYE 526

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
           R +  +IE + G  P WL P Q  +  ++   ++YA ++ N +K++++    D R+E I 
Sbjct: 527 RTLAWLIEKYAGMFPTWLCPEQVRILPVSDKYLDYADKVENEMKANNILCTVDSRSEKIG 586

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIR-RF 624
           YKIRE  + KIP ++I G+KE +E ++ +R RF
Sbjct: 587 YKIREARLAKIPYMLIVGEKEEAEGTVSVRSRF 619


>gi|156717366|ref|NP_001096223.1| probable threonyl-tRNA synthetase 2, cytoplasmic [Xenopus
           (Silurana) tropicalis]
 gi|123909108|sp|Q0V9S0|SYTC2_XENTR RecName: Full=Probable threonyl-tRNA synthetase 2, cytoplasmic;
           AltName: Full=Threonine--tRNA ligase; Short=ThrRS;
           AltName: Full=Threonyl-tRNA synthetase-like protein 2
 gi|111307891|gb|AAI21418.1| tarsl2 protein [Xenopus (Silurana) tropicalis]
          Length = 814

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 241/643 (37%), Positives = 363/643 (56%), Gaps = 23/643 (3%)

Query: 5   IKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEII 62
           IK+T  DG  +       T   VA  IS+ LA   V   +N ++ DL  P+ + S +E++
Sbjct: 174 IKITLADGKQVDGESWKTTPYQVAIGISKGLADNVVIAKVNNELWDLDRPLEQDSNVELL 233

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQ 121
             +   + AV  HS AHI+ E +++ +    +  GP IE+GFYYD +   +  SS+E   
Sbjct: 234 KFDSEEAQAVYWHSSAHILGETMENFYGGC-LCYGPPIENGFYYDMYLDGRGVSSNEFPS 292

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +E   + II    PF +  +S +   E+F+  K  +K  IL         T+YR G   D
Sbjct: 293 LENMCKAIIKEKQPFERLEVSKDLLLEMFKYNK--FKCRILNEKVDTPTTTVYRCGPLID 350

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHVR TG++K   K+ K +  YW G ++   L RIYG ++   + + ++  F EE+
Sbjct: 351 LCRGPHVRHTGKIKTL-KIYKNSSTYWEGRADMETLQRIYGISFPDSKLMKEWEQFQEEA 409

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVL 300
           + RDHRK+ R+ +LF   +   G  F+  +G  I+ TL  +++ + +  ++ E+ +P + 
Sbjct: 410 KNRDHRKIGRDQELFFFHDLSPGSCFFLPRGAHIYNTLTDFIKGEYQIRNFTEVASPNIY 469

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  LW+ SGHW  Y  NMF+ +   +T      FALKPMNCPGH  +F H  +S+RELP+
Sbjct: 470 NSKLWEMSGHWQHYSENMFSFEVEKET------FALKPMNCPGHCLMFGHRPRSWRELPL 523

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R A+FG ++RNE SG+L GL RVR F QDDAH+FCT +Q+  E       + S+YK FGF
Sbjct: 524 RFADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCTMDQIQEEMNGCLQFLQSVYKVFGF 583

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
               + LSTRPE  +G   +W++AE  ++  L+        ++N     G+GAFYGPK +
Sbjct: 584 -TFQLHLSTRPENYLGEIEIWNEAEKQLESSLNQFGEPW--KLNP----GDGAFYGPKID 636

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIGIMI 539
             +KDAIGR  QC TIQ+DF LP RFN  YV+    +K  PV+IHRA+ GS+ER I I+ 
Sbjct: 637 IKIKDAIGRYHQCATIQLDFQLPIRFNLTYVSKDGDDKKRPVIIHRAILGSVERMIAILC 696

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREH 598
           EN+ G  P WLSP Q +V  +  S  EYAQ++   +       E D  +  T+N KIR  
Sbjct: 697 ENYGGKWPFWLSPRQVMVIPVGPSCDEYAQQVCKDVFEAGFMAEVDLDHSCTLNKKIRNA 756

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            + +   I++ G+KE ++ ++ +R   +    ++ L  AI  L
Sbjct: 757 QLAQCNFILVVGEKEKTDSAVNVRTRDNKVHGEILLTSAIEKL 799


>gi|332251674|ref|XP_003274971.1| PREDICTED: threonyl-tRNA synthetase, cytoplasmic isoform 1
           [Nomascus leucogenys]
          Length = 723

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 243/624 (38%), Positives = 354/624 (56%), Gaps = 23/624 (3%)

Query: 5   IKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEII 62
           IK+T PDG  +       T   +A  IS+ LA   V   +N  V DL  P+ E S +E++
Sbjct: 83  IKVTLPDGKQVDAESWKTTPYLIACGISQGLADNTVIAKVNNVVWDLDRPLEEDSTLELL 142

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQ 121
             ED  + AV  HS AHIM EA++ ++    +  GP IE+GFYYD + +E   SS++ + 
Sbjct: 143 KFEDEEAQAVYWHSSAHIMGEAMERVYGGC-LCYGPPIENGFYYDMYLEEGGVSSNDFSS 201

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +E   ++II     F +  +  E    +F+  K  +K  IL         T+YR G   D
Sbjct: 202 LEALCKKIIKEKQAFERLEVKKETLLAMFKYNK--FKCRILNEKVNTPTTTVYRCGPLID 259

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHVR TG++K   K+ K +  YW G ++   L RIYG ++   + L ++    EE+
Sbjct: 260 LCRGPHVRHTGKIKAL-KIHKNSSTYWEGKADMETLQRIYGISFPDPKMLKEWEKLQEEA 318

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVL 300
           + RDHRK+ R+ +L+   E   G  F+  KG  I+  LI ++R +  K  ++E+ TP + 
Sbjct: 319 KNRDHRKIGRDQELYFFHELSPGSCFFLPKGAYIYNALIEFIRSEYRKRGFQEVVTPNIF 378

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  LW  SGHW  Y  NMF+ +   +       FALKPMNCPGH  +F+H  +S+RELP+
Sbjct: 379 NSRLWMTSGHWQHYSDNMFSFEVEKEL------FALKPMNCPGHCLMFDHRPRSWRELPL 432

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLA+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E     + + ++Y  FGF
Sbjct: 433 RLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSIFGF 492

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
               + LSTRPEK +G   +WD AE  ++  L+      +  +N+    G+GAFYGPK +
Sbjct: 493 -SFKLNLSTRPEKFLGDIEVWDQAEKQLENSLNEFGEKWE--LNS----GDGAFYGPKID 545

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIGIMI 539
             +KDAIGR  QC TIQ+DF LP RFN  YV+    +K  PV++HRA+ GS+ER I I+ 
Sbjct: 546 IQIKDAIGRYHQCATIQLDFQLPIRFNLTYVSHDGDDKKRPVIVHRAILGSVERMIAILT 605

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIREH 598
           EN+ G  P WLSP Q +V  +  +  EYAQ++           + D     T+N KIR  
Sbjct: 606 ENYGGKWPFWLSPRQVMVVPVGPTCDEYAQKVRQQFHDAKFMADIDLDPGCTLNKKIRNA 665

Query: 599 SIKKIPIIIICGDKEASERSIGIR 622
            + +   I++ G+KE    ++ IR
Sbjct: 666 QLAQYNFILVVGEKEKISGTVNIR 689


>gi|1464742|gb|AAB04939.1| threonyl-tRNA synthetase [Homo sapiens]
          Length = 712

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 244/625 (39%), Positives = 354/625 (56%), Gaps = 24/625 (3%)

Query: 5   IKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEII 62
           IK+T PDG  +       T   +A  IS+ LA   V   +N  V DL  P+ E  ++E++
Sbjct: 71  IKVTLPDGKQVDAESWKTTPYQIACGISQGLADNTVIAKVNNVVWDLDRPLEEDCTLELL 130

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQ 121
             ED  + AV  HS AHIM E ++ ++    +  GP IE+GFYYD + +E   SS++ + 
Sbjct: 131 KFEDEEAQAVYWHSSAHIMGEGMERVYGGC-LCYGPPIENGFYYDMYLEEGGVSSNDFSS 189

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +E   ++II     F +  +  E    +F+  K  +K  IL         T+YR G   D
Sbjct: 190 LEALCKKIIKEKQAFERLEVKKETLLAMFKYNK--FKCRILNEKVNTPTTTVYRCGPLID 247

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHVR TG++K   K+ K +  YW G ++   L RIYG ++   + L ++  F EE+
Sbjct: 248 LCRGPHVRHTGKIKAL-KIHKNSSTYWEGKADMETLQRIYGISFPDPKMLKEWEKFQEEA 306

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVL 300
           + RDHRK+ R+ +L+   E   G  F+  KG  I+  LI ++R +  K  ++E+ TP + 
Sbjct: 307 KNRDHRKIGRDQELYFFHELSPGSCFFLPKGVYIYNALIEFIRSEYRKRGFQEVVTPNIF 366

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  LW  SGHW  Y  NMF+ +   +       FALKPMNCPGH  +F+H  +S+RELP+
Sbjct: 367 NSRLWMTSGHWQHYSENMFSFEVEKEL------FALKPMNCPGHSLMFDHRPRSWRELPL 420

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLA+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E     + + ++Y  FGF
Sbjct: 421 RLADFGGLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSVFGF 480

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
               + LSTRPEK +G   +WD AE  ++  L+      +  +N+    G+GAFYGPK +
Sbjct: 481 -SFKLNLSTRPEKFLGDIEVWDQAEKQLENSLNEFGEKWE--LNS----GDGAFYGPKID 533

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE-KCHPVMIHRAVFGSIERFIGIMI 539
             +KDAIGR  QC TIQ+DF LP RFN  YV+   E K  PV++HRA+ GS+ER I I+ 
Sbjct: 534 IQIKDAIGRYHQCATIQLDFQLPIRFNLTYVSHDGEDKKRPVIVHRAILGSVERMIAILT 593

Query: 540 ENFKGNL-PLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIRE 597
           EN+ G L P WLSP Q +V  +  +  EYAQ +           + D     T+N KIR 
Sbjct: 594 ENYGGKLAPFWLSPRQVMVVPVGPTCDEYAQNVRQQFHDAKFMADIDLDPGCTLNKKIRN 653

Query: 598 HSIKKIPIIIICGDKEASERSIGIR 622
             + +   I++ G+KE    ++ IR
Sbjct: 654 AQLAQYNFILVVGEKEKITGTVNIR 678


>gi|38570111|ref|NP_689547.2| probable threonyl-tRNA synthetase 2, cytoplasmic [Homo sapiens]
 gi|189083596|sp|A2RTX5|SYTC2_HUMAN RecName: Full=Probable threonyl-tRNA synthetase 2, cytoplasmic;
           AltName: Full=Threonine--tRNA ligase; Short=ThrRS;
           AltName: Full=Threonyl-tRNA synthetase-like protein 2
 gi|119622721|gb|EAX02316.1| threonyl-tRNA synthetase-like 2 [Homo sapiens]
 gi|124376838|gb|AAI32672.1| Threonyl-tRNA synthetase-like 2 [Homo sapiens]
 gi|187953219|gb|AAI36316.1| Threonyl-tRNA synthetase-like 2 [Homo sapiens]
          Length = 802

 Score =  427 bits (1099), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 236/607 (38%), Positives = 352/607 (57%), Gaps = 22/607 (3%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAH 79
            T   VA  IS+ LA+  V   +NG++ DL  P+  + S+E++T ++  + AV  HS AH
Sbjct: 179 TTPYQVAAEISQELAESTVIAKVNGELWDLDRPLEGDSSLELLTFDNEEAQAVYWHSSAH 238

Query: 80  IMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQIEKKMQEIIARDSPFLK 138
           I+ EA++ ++    +  GP IE+GFYYD F +++  SS EL+ +E   + II    PF +
Sbjct: 239 ILGEAME-LYYGGHLCYGPPIENGFYYDMFIEDRAVSSTELSALENICKAIIKEKQPFER 297

Query: 139 QYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFF 198
             +S E   E+F+  K  +K  IL         T+YR G   DLC+GPHVR TG++K   
Sbjct: 298 LEVSKEILLEMFKYNK--FKCRILNEKVNTATTTVYRCGPLIDLCKGPHVRHTGKIKTI- 354

Query: 199 KLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI 258
           K+ K +  YW G+     L RIYG ++   + +  +  F EE++ RDHRK+ +E +LF  
Sbjct: 355 KIFKNSSTYWEGNPEMETLQRIYGISFPDNKMMRDWEKFQEEAKNRDHRKIGKEQELFFF 414

Query: 259 AEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRAN 317
            +   G  F+  +G  I+ TL  ++R +  K D+ E+ +P + +  LW+ SGHW  Y  N
Sbjct: 415 HDLSPGSCFFLPRGAFIYNTLTDFIREEYHKRDFTEVLSPNMYNSKLWEASGHWQHYSEN 474

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           MF  +   DT      FALKPMNCPGH  +F H  +S+RE+P+R A+FG ++RNE SG+L
Sbjct: 475 MFTFEIEKDT------FALKPMNCPGHCLMFAHRPRSWREMPIRFADFGVLHRNELSGTL 528

Query: 378 HGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGS 437
            GL RVR F QDDAH+FCT EQ+  E       + S+Y  FGF    + LSTRPE  +G 
Sbjct: 529 SGLTRVRRFQQDDAHIFCTVEQIEEEIKGCLQFLQSVYSTFGF-SFQLNLSTRPENFLGE 587

Query: 438 DALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ 497
             +W++AE  ++  L  +      ++N     G+GAFYGPK +  +KDAIGR  QC TIQ
Sbjct: 588 IEMWNEAEKQLQNSL--MDFGEPWKMNP----GDGAFYGPKIDIKIKDAIGRYHQCATIQ 641

Query: 498 VDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI 556
           +DF LP RFN  YV+    +K  PV+IHRA+ GS+ER I I+ EN+ G  P WLSP Q +
Sbjct: 642 LDFQLPIRFNLTYVSKDGDDKKRPVIIHRAILGSVERMIAILSENYGGKWPFWLSPRQVM 701

Query: 557 VTTITSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEAS 615
           V  +  +  +YA ++++         + D  +  T+N KIR   + +   I++ G+KE  
Sbjct: 702 VIPVGPTCEKYALQVSSEFFEEGFMADVDLDHSCTLNKKIRNAQLAQYNFILVVGEKEKI 761

Query: 616 ERSIGIR 622
           + ++ +R
Sbjct: 762 DNAVNVR 768


>gi|170095495|ref|XP_001878968.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164646272|gb|EDR10518.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 721

 Score =  427 bits (1099), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 233/632 (36%), Positives = 364/632 (57%), Gaps = 21/632 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGS-DVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           +I +T PDGS +      T   DVA+ +S+SL+++ V   ++G++ DL  P+ +   +E+
Sbjct: 77  EIVITMPDGSERKGKSWETSPMDVAKEVSKSLSERIVIAKVDGELWDLDRPLEKACKLEL 136

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELA 120
           +  E P    V  HS AH++ EA +  +    + +GP  ++GF+Y+   +E+P ++ +  
Sbjct: 137 LDFEHPEGKKVFWHSSAHVLGEAAERHY-GCHLCLGPPTDEGFFYEMAIEERPVTNADYP 195

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES-IPAKENVTLYRQGEW 179
            +EK  +  I     F +  +S EK  E+F   K  YK  ++++ +P   + T+YR G  
Sbjct: 196 ALEKVSEAAIKEKQKFERLVVSKEKLLEMFNYNK--YKQYLIQTKVPDGTSTTVYRCGPM 253

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLC GPH+  TG++K F  + K + +Y+ GD+N   L RIYG ++  +++L  Y  FL 
Sbjct: 254 VDLCVGPHIPHTGKIKAFM-VTKNSASYFLGDANNDSLQRIYGISFPDKKQLADYKVFLA 312

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQ 298
           E+ KRDHRK+ ++ +LF   +   G  F+   G +I+ +L+  MR +  K  Y+E+ +P 
Sbjct: 313 EAAKRDHRKIGKDQELFFFNDLSPGSCFFLPHGTRIYNSLVELMRSEYFKRGYQEVISPN 372

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           + +  LW+ SGHW +Y+ +MF +    +       +ALKPMNCPGH  +F+   +SY+EL
Sbjct: 373 MYNSKLWETSGHWQNYKDDMFLLDVEKEK------WALKPMNCPGHCLIFDSRDRSYKEL 426

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG ++RNE SG+L GL RVR F QDD HVFC   Q+  E   + + +  IY  F
Sbjct: 427 PIRMAEFGIIHRNEASGALTGLTRVRRFVQDDTHVFCMPSQLEEEISMLFDFMQHIYGLF 486

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+   ++LSTRP+  +G+   WD AE  +K  L+       D +N G    +GAFYGPK
Sbjct: 487 GFD-FRLELSTRPDNYLGTIETWDQAEAQLKLALEKHYPGKWD-LNPG----DGAFYGPK 540

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +  ++DA+ R +QC TIQ+DF LP RFN  Y ++      PV+IHRA+ GS+ERFI I+
Sbjct: 541 IDITIRDALRRSFQCATIQLDFQLPERFNLKYRSAEEAHNRPVIIHRAILGSLERFIAII 600

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
            E+F G  P W+SP Q +V  + +   EYA EI   L S  L  + D    T+  KIR  
Sbjct: 601 TEHFAGKWPFWISPRQVLVIPVAAPYKEYAAEITERLTSLGLFADVDNGENTLPKKIRNG 660

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
            I +   I++ G +E   RS+ +R      T+
Sbjct: 661 EIAQYNFILVVGQEELDARSVNVRNRDDVGTK 692


>gi|309803316|ref|ZP_07697413.1| threonine--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
 gi|308164824|gb|EFO67074.1| threonine--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
          Length = 643

 Score =  427 bits (1099), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 232/646 (35%), Positives = 367/646 (56%), Gaps = 23/646 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS K F    T  +VA SI+ SLAK AVA  +N ++  L   V  +  + IIT +
Sbjct: 5   ITLPDGSKKEFNHALTIKEVASSIATSLAKSAVAGKVNDEIRPLDFVVDTDARVAIITDK 64

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L V+R++ A +        +P V++    + EDGF+ D DKE    + EL  +EK+
Sbjct: 65  DEEGLQVLRNTAAFVFEMVASKQYPSVRLGTSELEEDGFFVDTDKEDQIKASELPDLEKE 124

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           MQ+ +        + +S  +  +LF  K + YK+E+L+     + V +Y+  ++ D    
Sbjct: 125 MQKKVKNGEKIEYKIVSKSELLDLF--KDDPYKLELLKE--EADEVAVYKLEDFVDFGFN 180

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
             + +TG++K F KL+ VAGAYW+G S+ PML RI+GTA+  + +L   L   E+ ++RD
Sbjct: 181 ALLLNTGKLKHF-KLLSVAGAYWQGKSSNPMLQRIFGTAFFKEADLKADLQRREDIKERD 239

Query: 246 HRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQH 303
           HR + R++DLF +  + G+G+ +W  KG  I + +  Y+  +++ D Y+ + TP +++  
Sbjct: 240 HRTIGRDLDLFFVDPKVGAGLPYWMPKGATIRRVIERYIIDKEVADGYQHVYTPVLMNLD 299

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
            ++ SGHW  YR +MF        + D     L+PMNCP H+ ++NH ++SYRELP+R+A
Sbjct: 300 AYKTSGHWAHYREDMFPPM----DMGDGEMLELRPMNCPSHIQIYNHHIRSYRELPIRIA 355

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           E G ++R E SG+L GL RVR  T +D H F   +Q+ +E  KI  LI+ +Y+DF     
Sbjct: 356 ELGMMHRYEKSGALSGLQRVREMTLNDGHTFVELDQVQSEFAKILKLIMEVYRDFDITDY 415

Query: 424 MVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
             +LS R     +K   +D +W+ ++ ++KG +D +       +      GE AFYGPK 
Sbjct: 416 YFRLSYRDPKNTDKYFANDEMWERSQKMLKGAMDDLG------LEYVEAEGEAAFYGPKL 469

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +   K A+G D    TIQ+DF LP RFN  YV    E+  PVM+HR + G++ERFI  + 
Sbjct: 470 DIQTKTALGNDETMSTIQLDFMLPERFNLSYVGKDGEEHRPVMVHRGIVGTMERFIAYLT 529

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           E +KG  P WL+P+Q  +  + + A  EYAQ + + L       E DFRNE + YKIRE 
Sbjct: 530 EIYKGAFPTWLAPLQVKIIPVNNDAHGEYAQNVKDQLMKLGFRAEVDFRNEKLGYKIREA 589

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
             +K+P  ++ GD E    S+ +R++GS   +  +L + +  L+ +
Sbjct: 590 QTQKVPYTLVLGDDELQHNSVNVRKYGSEDQESKALSEFVSELSAD 635


>gi|313764410|gb|EFS35774.1| threonyl-tRNA synthetase [Propionibacterium acnes HL013PA1]
 gi|313772208|gb|EFS38174.1| threonyl-tRNA synthetase [Propionibacterium acnes HL074PA1]
 gi|313807564|gb|EFS46051.1| threonyl-tRNA synthetase [Propionibacterium acnes HL087PA2]
 gi|313810073|gb|EFS47794.1| threonyl-tRNA synthetase [Propionibacterium acnes HL083PA1]
 gi|313815947|gb|EFS53661.1| threonyl-tRNA synthetase [Propionibacterium acnes HL059PA1]
 gi|313818605|gb|EFS56319.1| threonyl-tRNA synthetase [Propionibacterium acnes HL046PA2]
 gi|313820374|gb|EFS58088.1| threonyl-tRNA synthetase [Propionibacterium acnes HL036PA1]
 gi|313822822|gb|EFS60536.1| threonyl-tRNA synthetase [Propionibacterium acnes HL036PA2]
 gi|313825247|gb|EFS62961.1| threonyl-tRNA synthetase [Propionibacterium acnes HL063PA1]
 gi|313827535|gb|EFS65249.1| threonyl-tRNA synthetase [Propionibacterium acnes HL063PA2]
 gi|313830403|gb|EFS68117.1| threonyl-tRNA synthetase [Propionibacterium acnes HL007PA1]
 gi|313833773|gb|EFS71487.1| threonyl-tRNA synthetase [Propionibacterium acnes HL056PA1]
 gi|314915402|gb|EFS79233.1| threonyl-tRNA synthetase [Propionibacterium acnes HL005PA4]
 gi|314918317|gb|EFS82148.1| threonyl-tRNA synthetase [Propionibacterium acnes HL050PA1]
 gi|314920127|gb|EFS83958.1| threonyl-tRNA synthetase [Propionibacterium acnes HL050PA3]
 gi|314925261|gb|EFS89092.1| threonyl-tRNA synthetase [Propionibacterium acnes HL036PA3]
 gi|314931649|gb|EFS95480.1| threonyl-tRNA synthetase [Propionibacterium acnes HL067PA1]
 gi|314955705|gb|EFT00107.1| threonyl-tRNA synthetase [Propionibacterium acnes HL027PA1]
 gi|314958104|gb|EFT02207.1| threonyl-tRNA synthetase [Propionibacterium acnes HL002PA1]
 gi|314959956|gb|EFT04058.1| threonyl-tRNA synthetase [Propionibacterium acnes HL002PA2]
 gi|314973405|gb|EFT17501.1| threonyl-tRNA synthetase [Propionibacterium acnes HL053PA1]
 gi|314976084|gb|EFT20179.1| threonyl-tRNA synthetase [Propionibacterium acnes HL045PA1]
 gi|314978527|gb|EFT22621.1| threonyl-tRNA synthetase [Propionibacterium acnes HL072PA2]
 gi|314983896|gb|EFT27988.1| threonyl-tRNA synthetase [Propionibacterium acnes HL005PA1]
 gi|314988078|gb|EFT32169.1| threonyl-tRNA synthetase [Propionibacterium acnes HL005PA2]
 gi|314989885|gb|EFT33976.1| threonyl-tRNA synthetase [Propionibacterium acnes HL005PA3]
 gi|315085609|gb|EFT57585.1| threonyl-tRNA synthetase [Propionibacterium acnes HL002PA3]
 gi|315088339|gb|EFT60315.1| threonyl-tRNA synthetase [Propionibacterium acnes HL072PA1]
 gi|315095950|gb|EFT67926.1| threonyl-tRNA synthetase [Propionibacterium acnes HL038PA1]
 gi|315101418|gb|EFT73394.1| threonyl-tRNA synthetase [Propionibacterium acnes HL046PA1]
 gi|315105605|gb|EFT77581.1| threonyl-tRNA synthetase [Propionibacterium acnes HL030PA1]
 gi|315108634|gb|EFT80610.1| threonyl-tRNA synthetase [Propionibacterium acnes HL030PA2]
 gi|327326232|gb|EGE68022.1| threonine--tRNA ligase [Propionibacterium acnes HL096PA2]
 gi|327443095|gb|EGE89749.1| threonyl-tRNA synthetase [Propionibacterium acnes HL013PA2]
 gi|327445877|gb|EGE92531.1| threonyl-tRNA synthetase [Propionibacterium acnes HL043PA2]
 gi|327448141|gb|EGE94795.1| threonyl-tRNA synthetase [Propionibacterium acnes HL043PA1]
 gi|327450737|gb|EGE97391.1| threonyl-tRNA synthetase [Propionibacterium acnes HL087PA3]
 gi|327453921|gb|EGF00576.1| threonyl-tRNA synthetase [Propionibacterium acnes HL083PA2]
 gi|328753425|gb|EGF67041.1| threonyl-tRNA synthetase [Propionibacterium acnes HL020PA1]
 gi|328754156|gb|EGF67772.1| threonyl-tRNA synthetase [Propionibacterium acnes HL087PA1]
 gi|328760808|gb|EGF74374.1| threonine--tRNA ligase [Propionibacterium acnes HL099PA1]
          Length = 689

 Score =  427 bits (1099), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 238/644 (36%), Positives = 352/644 (54%), Gaps = 50/644 (7%)

Query: 36  KKAVAVAINGKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           +  VA+ ++G + DL   + +G+ +E +       L +IRHS  H+MA+AVQ ++PEV +
Sbjct: 37  RAVVAMRVDGNLVDLQRELHDGAEVEPVEATSEDGLNIIRHSATHVMAQAVQQLYPEVNL 96

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            IGP I DGFYYDF   +P + + L+++EK+M+ I+  +  F+++  + E ARE  E   
Sbjct: 97  GIGPFITDGFYYDFGNIEPVTPEVLSELEKRMKRIVKENQRFVRRVTTEESARE--ELAD 154

Query: 155 EAYKVEILESIP----------AKENVTLY----RQGE--WFDLCRGPHVRSTGQVKKFF 198
           + YK+E++ +                +T+Y    R GE  W DLCRGPHV ST  +   F
Sbjct: 155 QPYKLELIGTKGKGAEGASVEVGGGELTIYDNVRRNGEVAWKDLCRGPHVPSTKYLANTF 214

Query: 199 KLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI 258
            L K + AYW+GD     L RIYGTAW +++ L  Y   ++E+E+RDHRKL  E+DLF  
Sbjct: 215 ALTKFSAAYWKGDQANDQLQRIYGTAWASREGLAAYQQRIKEAERRDHRKLGAELDLFSF 274

Query: 259 AED-GSGVIFWHRKGWKIFQTLIS--YMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYR 315
            E+ G G++ +H KG  + + LI    + R ++  +  ++TP++    L+  SGH   Y 
Sbjct: 275 PEEIGPGLVVFHPKG-AMLRHLIEEHVIARHMEAGFNFVHTPEITKGGLFHTSGHLPYYA 333

Query: 316 ANMFAVKCAD-------DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV 368
             MF     D       +  +  + + LK MNCP H  +F    +SYRELP+R  E G  
Sbjct: 334 DTMFPPMLVDEERDEEGNVTRAGQEYYLKAMNCPMHNLIFRSRGRSYRELPLRFFEMGHD 393

Query: 369 YRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLS 428
           YR E SG +HGL R+RGF QDD+H +CT+EQ   E  K     +SI  DFG     ++LS
Sbjct: 394 YRYEKSGVVHGLTRMRGFAQDDSHTYCTREQAPGEIKKQIEFFLSILADFGLNDFYLELS 453

Query: 429 TR------PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL----GEGAFYGPK 478
           TR       EK +GSD  W  A +     LD +  S      TG+ L    G  AFYGPK
Sbjct: 454 TRESDSAKKEKFIGSDEDWQVATD----TLDQVCRS------TGLQLVPDPGGAAFYGPK 503

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
               ++DAIGR WQ  TIQ DFN P RF+  Y  +      P+M+H A  GS+ERFIG++
Sbjct: 504 VSVQVRDAIGRTWQMSTIQYDFNQPERFDLEYAAADGTHQRPIMLHSAKLGSVERFIGVL 563

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
            E++ G  P+WLSP+Q  +  +  +  +Y    A +L S  + +ETD  ++    KIR  
Sbjct: 564 TEHYAGAFPVWLSPVQVRLVPVAEAFNDYVTGFAEVLGSRGIRVETDLSSDRFGKKIRNA 623

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           S  K+P I+I G ++A   ++  R    +    V L +A+ I+ 
Sbjct: 624 SKDKVPFILIAGGEDAEAGAVSFRLRDGSQVNGVVLDEAVRIIA 667


>gi|266623074|ref|ZP_06116009.1| threonine--tRNA ligase [Clostridium hathewayi DSM 13479]
 gi|288865169|gb|EFC97467.1| threonine--tRNA ligase [Clostridium hathewayi DSM 13479]
          Length = 691

 Score =  427 bits (1099), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 244/654 (37%), Positives = 368/654 (56%), Gaps = 29/654 (4%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
           ++K+T  DGS+K +    +  D+A  IS  LA+ A A  ++G+V DL   V R+  + I+
Sbjct: 42  EMKITLKDGSVKEYDQAVSVYDIAADISEGLARNACAGEVDGRVVDLRTMVDRDCCLNIL 101

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQP-FSSDELAQ 121
           T  DP  LA  RH+ +H++A+AV+ ++PE ++AIGP IE+GFYYDF  E P FS ++L +
Sbjct: 102 TVHDPAGLAAYRHTTSHVLAQAVKHLYPEAKLAIGPSIENGFYYDF--ETPSFSREDLDK 159

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE +M++II       +  L   +A +  E K E YKVE++  +P    ++ YRQG++ D
Sbjct: 160 IEAEMKKIIKAGEKLERFTLPRAEAVKFMEEKGEPYKVELIRDLPEDAEISFYRQGDFTD 219

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LC GPH+ ST  +K F KL   +GAYWRG     ML+R+YGT++  ++EL +YL +L   
Sbjct: 220 LCAGPHLMSTKPIKAF-KLTSSSGAYWRGSEKNAMLTRVYGTSFAKKEELNEYLEYLANI 278

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQV 299
           + RDH KL RE++LF   +  G G+     KG KI QTL  ++   + K  Y    TP +
Sbjct: 279 KNRDHNKLGRELELFATVDVIGQGLPLLMPKGAKIIQTLQRWIEDEEEKRGYMRTKTPLM 338

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             + L+  S HWD Y+  MF +    D  KD   FAL+PM CP    V+    KSYR+LP
Sbjct: 339 AKKDLYVISDHWDHYKEGMFVL---GDEEKDDEVFALRPMTCPFQYYVYKQSPKSYRDLP 395

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM---FNECLKIHNLIISIYK 416
            R  E  +++RNE SG +HGL RVR FT  + H+    +Q+   F  C+ +    ++   
Sbjct: 396 CRYGETSTLFRNEDSGEMHGLTRVRQFTISEGHLVVRPDQLEEEFKGCVDLAKYCLTT-- 453

Query: 417 DFGFEK-IMVKLST-RPEKR---VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
             G E+ +  ++S   PEK    +G+  +WD+ E  M+ +LD I     + +      GE
Sbjct: 454 -LGLEEDVTYRMSKWDPEKADHYLGNAEMWDEVEAAMRKILDDIGIEYTEEV------GE 506

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
            AFYGPK +   K+  G++    TIQ+D  L  RF+  +V+    K  P +IHR   G  
Sbjct: 507 AAFYGPKLDIQAKNVYGKEDTMITIQLDMFLAERFDMSFVDKDGTKKRPYIIHRTSMGCY 566

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           ER +  +IE ++G  P WL P Q  V  I+    +YA+++ + LKS+ +    D R E I
Sbjct: 567 ERTLAWLIEKYEGAFPTWLCPEQVRVLPISEKYHDYAEKVESELKSNGILATVDERAEKI 626

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIR-RFGSTTTQKVSLLDAIPILTKE 644
            YKIRE  + K+P +++ G KE  +  + +R RF     QK SL D I  +++E
Sbjct: 627 GYKIREARLAKLPYMLVVGQKEEEDGLVSVRSRFNGDEGQK-SLSDFIDAISRE 679


>gi|328754594|gb|EGF68210.1| threonyl-tRNA synthetase [Propionibacterium acnes HL025PA2]
          Length = 689

 Score =  427 bits (1099), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 238/644 (36%), Positives = 352/644 (54%), Gaps = 50/644 (7%)

Query: 36  KKAVAVAINGKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           +  VA+ ++G + DL   + +G+ +E +       L +IRHS  H+MA+AVQ ++PEV +
Sbjct: 37  RAVVAMRVDGNLVDLQRELHDGADVEPVEATSEDGLNIIRHSATHVMAQAVQQLYPEVNL 96

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            IGP I DGFYYDF   +P + + L+++EK+M+ I+  +  F+++  + E ARE  E   
Sbjct: 97  GIGPFITDGFYYDFGNIEPVTPEVLSELEKRMKRIVKENQRFVRRVTTEESARE--ELAD 154

Query: 155 EAYKVEILESIP----------AKENVTLY----RQGE--WFDLCRGPHVRSTGQVKKFF 198
           + YK+E++ +                +T+Y    R GE  W DLCRGPHV ST  +   F
Sbjct: 155 QPYKLELIGTKGKGAEGASVEVGGGELTIYDNVRRNGEVAWKDLCRGPHVPSTKYLANTF 214

Query: 199 KLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI 258
            L K + AYW+GD     L RIYGTAW +++ L  Y   ++E+E+RDHRKL  E+DLF  
Sbjct: 215 ALTKFSAAYWKGDQANDQLQRIYGTAWASREGLAAYQQRIKEAERRDHRKLGAELDLFSF 274

Query: 259 AED-GSGVIFWHRKGWKIFQTLIS--YMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYR 315
            E+ G G++ +H KG  + + LI    + R ++  +  ++TP++    L+  SGH   Y 
Sbjct: 275 PEEIGPGLVVFHPKG-AMLRHLIEEHVIARHMEAGFNFVHTPEITKGGLFHTSGHLPYYA 333

Query: 316 ANMFAVKCAD-------DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV 368
             MF     D       +  +  + + LK MNCP H  +F    +SYRELP+R  E G  
Sbjct: 334 DTMFPPMLVDEERDEEGNVTRAGQEYYLKAMNCPMHNLIFRSRGRSYRELPLRFFEMGHD 393

Query: 369 YRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLS 428
           YR E SG +HGL R+RGF QDD+H +CT+EQ   E  K     +SI  DFG     ++LS
Sbjct: 394 YRYEKSGVVHGLTRMRGFAQDDSHTYCTREQAPGEIKKQIEFFLSILADFGLNDFYLELS 453

Query: 429 TR------PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL----GEGAFYGPK 478
           TR       EK +GSD  W  A +     LD +  S      TG+ L    G  AFYGPK
Sbjct: 454 TRESDSAKKEKFIGSDEDWQVATD----TLDQVCRS------TGLQLVPDPGGAAFYGPK 503

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
               ++DAIGR WQ  TIQ DFN P RF+  Y  +      P+M+H A  GS+ERFIG++
Sbjct: 504 VSVQVRDAIGRTWQMSTIQYDFNQPERFDLEYAAADGTHQRPIMLHSAKLGSVERFIGVL 563

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
            E++ G  P+WLSP+Q  +  +  +  +Y    A +L S  + +ETD  ++    KIR  
Sbjct: 564 TEHYAGAFPVWLSPVQVRLVPVAEAFNDYVTGFAEVLGSRGIRVETDLSSDRFGKKIRNA 623

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           S  K+P I+I G ++A   ++  R    +    V L +A+ I+ 
Sbjct: 624 SKDKVPFILIAGGEDAEAGAVSFRLRDGSQVNGVVLDEAVRIIA 667


>gi|326533164|dbj|BAJ93554.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 711

 Score =  427 bits (1099), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 233/647 (36%), Positives = 369/647 (57%), Gaps = 24/647 (3%)

Query: 5   IKLTFPDGSIKNFPVH-ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           I++T PDG+IK      +T  D+A  IS  LA   +   +NG + D++ P+  +  +++ 
Sbjct: 77  IRVTLPDGAIKEGKKWISTPMDIATGISTGLAASCLIAQVNGVLWDMTRPLEGDCDLKLF 136

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE--DGFYYDFD-KEQPFSSDEL 119
             +         HS AHI+ E+++ ++   ++ IGP     +GFYYD   K+   +    
Sbjct: 137 KFDSNEGRDTFWHSSAHILGESLERVYG-CKLCIGPCTTRGEGFYYDAHYKDLTLNDTHF 195

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             I+K+ ++ +A   PF +  +S  +A E+F   +  +KVEI+  +P  + +T+YR G  
Sbjct: 196 GLIDKQAKKAVAEKQPFERIEVSRAEALEIFAENE--FKVEIINELPEDKTITVYRCGPL 253

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPH+ +T  VK F   +K + +YWRG ++R  L R+YG ++   + L +YL+ +E
Sbjct: 254 VDLCRGPHIPNTSFVKAF-ACLKASASYWRGKADRESLQRVYGISFPDSKRLKEYLHMIE 312

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E++KRDHR L +  +LF       G  F+   G  I+  L+ ++R++ ++  Y E+ +P 
Sbjct: 313 EAKKRDHRLLGQSQELFFFHPLSPGSCFFLPNGAIIYNKLMDFLRKEYRERGYREVLSPN 372

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           + +  LW+ SGH  +Y+ NMF  +       + + F LKPMNCPGH  +F H ++SYREL
Sbjct: 373 IYNMQLWETSGHAANYKDNMFVFEI------EKQEFGLKPMNCPGHCLMFGHKVRSYREL 426

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+A+FG ++RNE SG+L GL RVR F QDDAH+FCT+ Q+ +E       I  +YK F
Sbjct: 427 PLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCTESQIKDEVGACLEFIDYVYKIF 486

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+   ++LSTRPEK +G    W+ AE  +   L+        +IN      +GAFYGPK
Sbjct: 487 GFQ-YELELSTRPEKYLGDIETWNKAEQQLTEALNEFGKPW--KINE----ADGAFYGPK 539

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC-HPVMIHRAVFGSIERFIGI 537
            +  + DA+ R +QC T+Q+DF LP RF   Y      K   PVMIHRA+ GS+ER   I
Sbjct: 540 IDIGVFDALKRKFQCATLQLDFQLPLRFKLTYSAEDEAKLERPVMIHRAILGSVERMFAI 599

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           ++E++ G  PLWLSP QAIV  ++S+++ YA+E+   + +    ++ D  + TI  K+RE
Sbjct: 600 LLEHYNGKWPLWLSPRQAIVCCVSSNSLAYAKEVHAQIHAAGFHVDIDMTDRTIQKKVRE 659

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
             + +   I++ G KEA    + +R          S+ D I   + E
Sbjct: 660 AQLAQFNYILVVGAKEAESGKVVLRVRDKADLSTESIADVIARFSDE 706


>gi|327331893|gb|EGE73630.1| threonine--tRNA ligase [Propionibacterium acnes HL096PA3]
          Length = 689

 Score =  427 bits (1098), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 238/644 (36%), Positives = 352/644 (54%), Gaps = 50/644 (7%)

Query: 36  KKAVAVAINGKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           +  VA+ ++G + DL   + +G+ +E +       L +IRHS  H+MA+AVQ ++PEV +
Sbjct: 37  RAVVAMRVDGNLVDLQRELHDGAEVEPVEATSEDGLNIIRHSATHVMAQAVQQLYPEVNL 96

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            IGP I DGFYYDF   +P + + L+++EK+M+ I+  +  F+++  + E ARE  E   
Sbjct: 97  GIGPFITDGFYYDFGNIEPVTPEVLSELEKRMKRIVKENQRFVRRVTTEESARE--ELAD 154

Query: 155 EAYKVEILESIP----------AKENVTLY----RQGE--WFDLCRGPHVRSTGQVKKFF 198
           + YK+E++ +                +T+Y    R GE  W DLCRGPHV ST  +   F
Sbjct: 155 QPYKLELIGTKGKGAEGASVEVGGGELTIYDNVRRNGEVAWKDLCRGPHVPSTKYLANTF 214

Query: 199 KLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI 258
            L K + AYW+GD     L RIYGTAW +++ L  Y   ++E+E+RDHRKL  E+DLF  
Sbjct: 215 ALTKFSAAYWKGDQANDQLQRIYGTAWASREGLAAYQQRIKEAERRDHRKLGAELDLFSF 274

Query: 259 AED-GSGVIFWHRKGWKIFQTLIS--YMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYR 315
            E+ G G++ +H KG  + + LI    + R ++  +  ++TP++    L+  SGH   Y 
Sbjct: 275 PEEIGPGLVVFHPKG-AMLRHLIEEHVIARHMEAGFNFVHTPEITKGGLFHTSGHLPYYA 333

Query: 316 ANMFAVKCAD-------DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV 368
             MF     D       +  +  + + LK MNCP H  +F    +SYRELP+R  E G  
Sbjct: 334 DTMFPPMLVDEERDEEGNVTRAGQEYYLKAMNCPMHNLIFRSRGRSYRELPLRFFEMGHD 393

Query: 369 YRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLS 428
           YR E SG +HGL R+RGF QDD+H +CT+EQ   E  K     +SI  DFG     ++LS
Sbjct: 394 YRYEKSGVVHGLTRMRGFAQDDSHTYCTREQAPGEIKKQIEFFLSILADFGLNDFYLELS 453

Query: 429 TR------PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL----GEGAFYGPK 478
           TR       EK +GSD  W  A +     LD +  S      TG+ L    G  AFYGPK
Sbjct: 454 TRESDSAKKEKFIGSDEDWQVATD----TLDQVCRS------TGLQLVPDPGGAAFYGPK 503

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
               ++DAIGR WQ  TIQ DFN P RF+  Y  +      P+M+H A  GS+ERFIG++
Sbjct: 504 VSVQVRDAIGRTWQMSTIQYDFNQPERFDLEYAAADGTHQRPIMLHSAKLGSVERFIGVL 563

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
            E++ G  P+WLSP+Q  +  +  +  +Y    A +L S  + +ETD  ++    KIR  
Sbjct: 564 TEHYAGAFPVWLSPVQVRLVPVAEAFNDYVTGFAEVLGSRGIRVETDLSSDRFGKKIRNA 623

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           S  K+P I+I G ++A   ++  R    +    V L +A+ I+ 
Sbjct: 624 SKDKVPFILIAGGEDAEAGAVSFRLRDGSQVNGVVLDEAVRIIA 667


>gi|315080595|gb|EFT52571.1| threonyl-tRNA synthetase [Propionibacterium acnes HL078PA1]
          Length = 689

 Score =  427 bits (1098), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 238/644 (36%), Positives = 352/644 (54%), Gaps = 50/644 (7%)

Query: 36  KKAVAVAINGKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           +  VA+ ++G + DL   + +G+ +E +       L +IRHS  H+MA+AVQ ++PEV +
Sbjct: 37  RAVVAMRVDGNLVDLQRELHDGAEVEPVEATSEDGLNIIRHSATHVMAQAVQQLYPEVNL 96

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            IGP I DGFYYDF   +P + + L+++EK+M+ I+  +  F+++  + E ARE  E   
Sbjct: 97  GIGPFITDGFYYDFGNIEPVTPEVLSELEKRMKRIVKENQRFVRRVTTEESARE--ELAD 154

Query: 155 EAYKVEILESIP----------AKENVTLY----RQGE--WFDLCRGPHVRSTGQVKKFF 198
           + YK+E++ +                +T+Y    R GE  W DLCRGPHV ST  +   F
Sbjct: 155 QPYKLELIGTKGKGAEGASVEVGGGELTIYDNVRRNGEVAWKDLCRGPHVPSTKYLANTF 214

Query: 199 KLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI 258
            L K + AYW+GD     L RIYGTAW +++ L  Y   ++E+E+RDHRKL  E+DLF  
Sbjct: 215 ALTKFSAAYWKGDQANDQLQRIYGTAWASREGLAAYQQRIKEAERRDHRKLGAELDLFSF 274

Query: 259 AED-GSGVIFWHRKGWKIFQTLIS--YMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYR 315
            E+ G G++ +H KG  + + LI    + R ++  +  ++TP++    L+  SGH   Y 
Sbjct: 275 PEEIGPGLVVFHPKG-AMLRHLIEEHVIARHMEAGFNFVHTPEITKGGLFHTSGHLPYYA 333

Query: 316 ANMFAVKCAD-------DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV 368
             MF     D       +  +  + + LK MNCP H  +F    +SYRELP+R  E G  
Sbjct: 334 DTMFPPMLVDEERDEEGNVTRAGQEYYLKAMNCPMHNLIFRSRGRSYRELPLRFFEIGHD 393

Query: 369 YRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLS 428
           YR E SG +HGL R+RGF QDD+H +CT+EQ   E  K     +SI  DFG     ++LS
Sbjct: 394 YRYEKSGVVHGLTRMRGFAQDDSHTYCTREQAPGEIKKQIEFFLSILADFGLNDFYLELS 453

Query: 429 TR------PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL----GEGAFYGPK 478
           TR       EK +GSD  W  A +     LD +  S      TG+ L    G  AFYGPK
Sbjct: 454 TRESDSAKKEKFIGSDEDWQVATD----TLDQVCRS------TGLQLVPDPGGAAFYGPK 503

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
               ++DAIGR WQ  TIQ DFN P RF+  Y  +      P+M+H A  GS+ERFIG++
Sbjct: 504 VSVQVRDAIGRTWQMSTIQYDFNQPERFDLEYAAADGTHQRPIMLHSAKLGSVERFIGVL 563

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
            E++ G  P+WLSP+Q  +  +  +  +Y    A +L S  + +ETD  ++    KIR  
Sbjct: 564 TEHYAGAFPVWLSPVQVRLVPVAEAFNDYVTGFAEVLGSRGIRVETDLSSDRFGKKIRNA 623

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           S  K+P I+I G ++A   ++  R    +    V L +A+ I+ 
Sbjct: 624 SKDKVPFILIAGGEDAEAGAVSFRLRDGSQVNGVVLDEAVRIIA 667


>gi|283769478|ref|ZP_06342374.1| threonine--tRNA ligase [Bulleidia extructa W1219]
 gi|283103746|gb|EFC05132.1| threonine--tRNA ligase [Bulleidia extructa W1219]
          Length = 584

 Score =  427 bits (1098), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 224/588 (38%), Positives = 353/588 (60%), Gaps = 23/588 (3%)

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQIE 123
           E+P  L V+ HSCAH++A+AV+ ++P+ +  +GP++E+GFYYD D  ++    +++ +IE
Sbjct: 5   ENP-ELEVLNHSCAHLLAQAVKHLYPQAKFWVGPVVEEGFYYDIDLGDEVIRDEDIPKIE 63

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M++    +   ++  +S  +A + F+   + YKV+++  +P   N+++Y QG++ DLC
Sbjct: 64  KEMKKCAKDNKRIIRHEISRAEALQQFQD--DPYKVDLINRMPEDTNISMYSQGDFTDLC 121

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV ST  +K F  L   +GAYW+GD N  +L RIYG  + T  EL  YL  LEE+++
Sbjct: 122 RGPHVESTKLLKNFKLLKH-SGAYWKGDKNNKVLQRIYGVCFPTDTELEAYLQVLEEAKE 180

Query: 244 RDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQVLD 301
           RDHRKL +++ +F  +E  GSG+  W   G+ + + L  Y M ++I   YE + TP V  
Sbjct: 181 RDHRKLGKDLKMFLFSETVGSGLPMWLPNGFTVRRLLSDYIMEKEIALGYEHVLTPSVAS 240

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             L++ SGH   Y+ +MF +       +D  ++ L+PMNCP H+ ++   L SYR+LPVR
Sbjct: 241 TKLYEVSGHLAHYQEDMFPI-----MERDGDSYVLRPMNCPEHMIIYKASLHSYRDLPVR 295

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AE    +R E SG+L G+ R R FTQ+D+H+F   +Q+  E   +  LI+ +Y DFGF+
Sbjct: 296 IAEIAHDFRFEASGALTGIERSRSFTQNDSHIFLRPDQIAEEIKNVTKLILDVYNDFGFK 355

Query: 422 KIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
               +LS R     +K  G+D LW  +EN ++ VL  +K      +      GE AFYGP
Sbjct: 356 DYSFRLSLRDLNNTDKYFGNDDLWTRSENELREVLKEMK------VPYYEAEGEAAFYGP 409

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  +K A+G D    TIQ+D+ LP RF   YVN  ++K  PV+IHRA+ GS++RF+  
Sbjct: 410 KIDVQVKSALGHDVTLSTIQLDYQLPERFELEYVNKDNQKVRPVVIHRAILGSLDRFVAF 469

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           ++E  KG LPLWL+P+Q  V  + S A  +YA +I   LK   +    D RNE + Y+IR
Sbjct: 470 LLEETKGVLPLWLAPLQVEVIPVNSEAHGDYASKINRALKREGIRSHLDDRNEKLGYRIR 529

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           E  + K+PI I+ G+++    ++ +R +GS      S  D +  L ++
Sbjct: 530 EAQMNKVPIQIVVGNRDIENETVTVRTYGSKEEVTHSFKDYLNQLVEQ 577


>gi|330888315|gb|EGH20976.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. mori str.
           301020]
          Length = 402

 Score =  427 bits (1098), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 198/405 (48%), Positives = 286/405 (70%), Gaps = 12/405 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SI 59
           MP+   +T PDGS ++F    + +DVA SI   LAK  VA  ++GK+ D  D +    S+
Sbjct: 1   MPT---ITLPDGSQRSFDHAVSVADVALSIGAGLAKATVAGKVDGKLVDACDLIENDVSL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           +IITP+D   L +IRHSCAH++  AV+ ++P  ++ IGP+I+DGFYYD   E+PF+ D++
Sbjct: 58  QIITPKDQEGLEIIRHSCAHLVGHAVKQLYPTAKMVIGPVIDDGFYYDIAYERPFTPDDM 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A IE++MQ++I +D   +K+     +  E+F ++ E YK+ ++E +P ++ + LY   E+
Sbjct: 118 AAIEQRMQQLIEKDYDVIKKVTPRAEVIEVFTARHEDYKLRLVEDMPNEQAMGLYYHEEY 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            D+CRGPHV +T +  K FKL K++GAYWRGD+    L R+YGTAW  +++L  Y+  +E
Sbjct: 178 VDMCRGPHVPNT-RFLKSFKLTKLSGAYWRGDAKNEQLQRVYGTAWADKKQLAAYIQRIE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQ 298
           E+EKRDHRK+ + + LFH  E+  G++FWH +GW ++Q L  YMR+  +++ Y EI TPQ
Sbjct: 237 EAEKRDHRKIGKRLGLFHTQEEAPGMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHW +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYREL
Sbjct: 297 VVDRSLWEKSGHWANYADNMFT------TESESRDYAIKPMNCPCHVQVFNQGLKSYREL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE 403
           P+RLAEFG+ +RNEPSG+LHG+MRVRGFTQDDAH+FCT++QM  E
Sbjct: 351 PMRLAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEDQMQAE 395


>gi|218134037|ref|ZP_03462841.1| hypothetical protein BACPEC_01927 [Bacteroides pectinophilus ATCC
           43243]
 gi|217991412|gb|EEC57418.1| hypothetical protein BACPEC_01927 [Bacteroides pectinophilus ATCC
           43243]
          Length = 585

 Score =  427 bits (1098), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 219/584 (37%), Positives = 360/584 (61%), Gaps = 25/584 (4%)

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE-L 119
           ++  ++  +L  + HSCAH+MA+A++ ++P+ +  +GP++ +GFYYD D       DE +
Sbjct: 1   MVNFKEDENLNTLNHSCAHLMAQAIKHLYPQAKFWVGPVVAEGFYYDVDLGDDVIRDEDI 60

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A IEK+M++I       +++ +S E+A E+F  K + YK++++ ++    N+T Y QG++
Sbjct: 61  AAIEKEMKKIAKTGKKIIRKEISKEEALEMF--KDDEYKIDLINNL-EDGNITCYEQGDF 117

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV +  ++ + FKL++ +GAYW+GDSN  +L RIYG  + T +EL  +L  LE
Sbjct: 118 TDLCRGPHVDNV-KLCRNFKLIRHSGAYWKGDSNNKVLQRIYGVCFPTPEELEAHLQLLE 176

Query: 240 ESEKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTP 297
           E+++RDHRK+ ++M LF + +  G G+  +  KG+ I+Q L +Y++ K  K  Y  + TP
Sbjct: 177 EAKERDHRKIGKDMGLFMVDDLIGRGLPMFLPKGYVIWQELENYIKDKERKLGYLHVMTP 236

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +   +L++ SGHWD Y+ NMF     D       +F L+PMNCP H+ ++ + + SY++
Sbjct: 237 CIGTVNLYKTSGHWDHYKENMFPAMDVDG-----ESFVLRPMNCPHHMMIYANRMHSYKD 291

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+ E    +R E SG+L G+ R R F Q+DAH+F T EQ+ +E  ++ +LI S YKD
Sbjct: 292 LPIRIGEIAHDFRYESSGTLKGIERGRHFCQNDAHIFVTPEQIEDEFKRVVDLIFSTYKD 351

Query: 418 FGFEKIMVKLSTR-PEKRV---GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           FG       LS R P  +V     D +W+ AE+ ++ VL+ +     + I      GE A
Sbjct: 352 FGITDYRCVLSLRDPADKVKYHDDDEMWNKAEDALRTVLNDLGIEYTEEI------GEAA 405

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  +K A+G ++   T Q+DF LP++FN  Y++   EK  PV++HRA+ GS++R
Sbjct: 406 FYGPKLDVNVKPAVGNEYTLSTCQLDFCLPAKFNLTYIDKDGEKKTPVVLHRAILGSLDR 465

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSS---AVEYAQEIANLLKSHHLSIETDFRNET 590
           F+  ++E  KGNLP WL+P+Q  V  + +     +EYA EI + L+  ++ +E D R E 
Sbjct: 466 FMAYILEETKGNLPTWLAPVQVRVMPVKTDNEELMEYAHEICSALEEKNVRVELDDRGEK 525

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           + Y++RE  I+K+P +++ G  E  +R++  R  G   T  + L
Sbjct: 526 LGYRMREGQIQKVPYLLVIGFNEKEDRTVSYRLHGEADTTVLGL 569


>gi|227496236|ref|ZP_03926533.1| threonine--tRNA ligase [Actinomyces urogenitalis DSM 15434]
 gi|226834224|gb|EEH66607.1| threonine--tRNA ligase [Actinomyces urogenitalis DSM 15434]
          Length = 679

 Score =  427 bits (1098), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 248/674 (36%), Positives = 363/674 (53%), Gaps = 55/674 (8%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI-E 60
           P  + +T  DG+ +      TG+ + E       +  VA+ ++G+  DLS  +  G++ E
Sbjct: 3   PQQLTITL-DGAERIIEEGTTGTTLFEG-----DRDVVAMKVDGEPWDLSRELHTGAVVE 56

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            IT      L ++RHS  H+MA+AVQ I+PEV + IGP I DGFYYDF      + + L 
Sbjct: 57  PITLASQDGLNILRHSATHVMAQAVQEIFPEVNLGIGPFITDGFYYDFGNIDAVTPELLK 116

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIP-----------AKE 169
            IEK+M+ I+     F+++ +S E+ R   E   + YK+E++++                
Sbjct: 117 DIEKRMKRIVKEGQSFVRREISEEEGR--VELADQPYKLELIDTKGKGAEASASVEVGAG 174

Query: 170 NVTLY----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
            +T+Y    R GE  W DLCRGPH+ ST  + + F L K + AYW+GD +   L RIYGT
Sbjct: 175 GLTIYDNVRRNGEVAWKDLCRGPHLPSTKLIGQGFALTKSSSAYWKGDQHGDSLQRIYGT 234

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISY 282
           AW ++++L  Y   L E+ KRDHRKL  E+DLF   E+ G G++ +H KG  +   +  Y
Sbjct: 235 AWASKEDLKAYQTRLAEAAKRDHRKLGAELDLFSFPEEIGPGLVVFHPKGGMLRHEIEKY 294

Query: 283 -MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADD-------TIKDLRTF 334
            + R  +  ++ ++TP++    L+  SGH   Y   MF    AD+         K  + +
Sbjct: 295 VIERHERAGFDFVHTPEITKAGLFHTSGHLPYYADTMFPPMLADEETDAEGNVTKAGQEY 354

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
            LK MNCP H  +F    +SYRELP+RL E G  YR E SG +HGL R+RGFTQDD+H +
Sbjct: 355 YLKAMNCPMHNLIFRSRGRSYRELPLRLFEMGHDYRYEKSGVVHGLTRMRGFTQDDSHTY 414

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE------KRVGSDALWDDAENIM 448
           CT+EQ   E  K     ISI K FG     ++LSTR E      K +GSD  W+ A   +
Sbjct: 415 CTREQAPEEIKKQIEFFISILKAFGLTDFYLELSTRDEDGAKKDKFIGSDEDWEAATRTL 474

Query: 449 KGVLDTIKNSSQDRINTGVLL----GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPS 504
                     SQ   +TG+ L    G  AFYGPK    +KDAIGR WQ  TIQ DFN P 
Sbjct: 475 ----------SQVCASTGLDLVPDPGGAAFYGPKVSVQVKDAIGRTWQMSTIQYDFNQPE 524

Query: 505 RFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA 564
           RF+  Y  +      P+M+H A  GS+ERFIG++ E++ G  P WL+P+Q  +  +  + 
Sbjct: 525 RFDLEYTAADGSHQRPIMLHSAKLGSVERFIGVLTEHYAGAFPAWLAPVQVRLIPVAEAF 584

Query: 565 VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRF 624
            +Y  ++A  L+   + +ETD  ++    KIR  S +K+P  +I G ++A   ++  R  
Sbjct: 585 DDYVTQVAARLRERGVRVETDLSDDRFGKKIRNASKEKVPFTLIAGGEDAEAGAVSFRFR 644

Query: 625 GSTTTQKVSLLDAI 638
               T  V + +AI
Sbjct: 645 DGEQTNGVPVDEAI 658


>gi|328773873|gb|EGF83910.1| hypothetical protein BATDEDRAFT_18299 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 706

 Score =  427 bits (1098), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 239/624 (38%), Positives = 357/624 (57%), Gaps = 23/624 (3%)

Query: 5   IKLTFPDGSI-KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEII 62
           I++T PDG I        T  ++A+++S+SLA + V   ++G + DL  P+ +  S+E++
Sbjct: 64  IEVTLPDGRIMPGVAWETTPFEIAKTLSKSLADRVVIAKVDGVLFDLVRPMEQSCSLELL 123

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
             +      V  HS AH++ EA +  +    + IGP IE+GFYY+   E+  +  +   +
Sbjct: 124 DFDHEEGKKVFWHSSAHVLGEACELHY-GCHLCIGPPIEEGFYYEMSMERSVTLADYESL 182

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFD 181
           +   +  ++   PF +  +S E   E+F+  K  YKV I+ + IP   + T+YR G   D
Sbjct: 183 QTLAKRAVSEKQPFERLVVSKENLLEMFQDNK--YKVHIIKDKIPDNTSTTVYRCGPLID 240

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LC GPH+ +T ++K   K+ K + +Y+ G++    L R+YG ++   + + +Y  F+EE+
Sbjct: 241 LCYGPHIPNTNRIKAL-KVTKNSSSYFLGNAQNDSLQRVYGVSFPDTKLMKEYEKFVEEA 299

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVL 300
           EKRDHRK+  E +LF   +   G  F+   G +I+ TLI   R +  K  + E+ TP + 
Sbjct: 300 EKRDHRKIGTEQELFFFNDFSPGSAFFLPHGTRIYNTLIDLQRSEYRKRGFHEVVTPNMY 359

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  LW++SGHW +Y  +MFA+    +       FALKPMNCPGH  +F +  +SYRELP+
Sbjct: 360 NTKLWERSGHWANYHEDMFALDVEKEK------FALKPMNCPGHCLIFKNRDRSYRELPL 413

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLA+FG ++RNE SG+L GL RVR F QDDAH+FC  +Q+  E     + +  IY  FGF
Sbjct: 414 RLADFGVLHRNEASGALSGLTRVRRFQQDDAHIFCRLDQIGTEMEGCLDFLKHIYSIFGF 473

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
               +KLSTRPE  +G  A WD AE +++  L+  K  S   +N     G+GAFYGPK +
Sbjct: 474 -TFELKLSTRPENFLGEIATWDQAEKLLEEALN--KFGSTWSLNE----GDGAFYGPKID 526

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYV--NSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++ DA+ R  QC TIQ+DF LP RF   Y   +  ++   PVMIHRA+ GS+ER I I+
Sbjct: 527 IVISDALRRRHQCATIQLDFQLPDRFELEYRTDDPANQFSRPVMIHRAILGSVERMIAIL 586

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
            ENF G  P WLSP Q IV  I     EYA ++AN L +  L  E D  + T+  KIR  
Sbjct: 587 TENFAGKWPFWLSPRQVIVVPIAVPFNEYATKVANQLYAAGLYAEADVSDLTLKKKIRNA 646

Query: 599 SIKKIPIIIICGDKEASERSIGIR 622
            I +   I + G++E    S+  R
Sbjct: 647 EIAQWNFIFVVGEEEEKSDSVNCR 670


>gi|50842554|ref|YP_055781.1| threonyl-tRNA synthetase [Propionibacterium acnes KPA171202]
 gi|289426579|ref|ZP_06428319.1| threonine--tRNA ligase [Propionibacterium acnes J165]
 gi|295130636|ref|YP_003581299.1| threonine--tRNA ligase [Propionibacterium acnes SK137]
 gi|73919815|sp|Q6A8U3|SYT_PROAC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|50840156|gb|AAT82823.1| threonyl-tRNA synthetase [Propionibacterium acnes KPA171202]
 gi|289160223|gb|EFD08387.1| threonine--tRNA ligase [Propionibacterium acnes J165]
 gi|291376551|gb|ADE00406.1| threonine--tRNA ligase [Propionibacterium acnes SK137]
 gi|332675479|gb|AEE72295.1| threonine--tRNA ligase [Propionibacterium acnes 266]
          Length = 684

 Score =  427 bits (1098), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 238/644 (36%), Positives = 352/644 (54%), Gaps = 50/644 (7%)

Query: 36  KKAVAVAINGKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           +  VA+ ++G + DL   + +G+ +E +       L +IRHS  H+MA+AVQ ++PEV +
Sbjct: 32  RAVVAMRVDGNLVDLQRELHDGAEVEPVEATSEDGLNIIRHSATHVMAQAVQQLYPEVNL 91

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            IGP I DGFYYDF   +P + + L+++EK+M+ I+  +  F+++  + E ARE  E   
Sbjct: 92  GIGPFITDGFYYDFGNIEPVTPEVLSELEKRMKRIVKENQRFVRRVTTEESARE--ELAD 149

Query: 155 EAYKVEILESIP----------AKENVTLY----RQGE--WFDLCRGPHVRSTGQVKKFF 198
           + YK+E++ +                +T+Y    R GE  W DLCRGPHV ST  +   F
Sbjct: 150 QPYKLELIGTKGKGAEGASVEVGGGELTIYDNVRRNGEVAWKDLCRGPHVPSTKYLANTF 209

Query: 199 KLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI 258
            L K + AYW+GD     L RIYGTAW +++ L  Y   ++E+E+RDHRKL  E+DLF  
Sbjct: 210 ALTKFSAAYWKGDQANDQLQRIYGTAWASREGLAAYQQRIKEAERRDHRKLGAELDLFSF 269

Query: 259 AED-GSGVIFWHRKGWKIFQTLIS--YMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYR 315
            E+ G G++ +H KG  + + LI    + R ++  +  ++TP++    L+  SGH   Y 
Sbjct: 270 PEEIGPGLVVFHPKG-AMLRHLIEEHVIARHMEAGFNFVHTPEITKGGLFHTSGHLPYYA 328

Query: 316 ANMFAVKCAD-------DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV 368
             MF     D       +  +  + + LK MNCP H  +F    +SYRELP+R  E G  
Sbjct: 329 DTMFPPMLVDEERDEEGNVTRAGQEYYLKAMNCPMHNLIFRSRGRSYRELPLRFFEMGHD 388

Query: 369 YRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLS 428
           YR E SG +HGL R+RGF QDD+H +CT+EQ   E  K     +SI  DFG     ++LS
Sbjct: 389 YRYEKSGVVHGLTRMRGFAQDDSHTYCTREQAPGEIKKQIEFFLSILADFGLNDFYLELS 448

Query: 429 TR------PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL----GEGAFYGPK 478
           TR       EK +GSD  W  A +     LD +  S      TG+ L    G  AFYGPK
Sbjct: 449 TRESDSAKKEKFIGSDEDWQVATD----TLDQVCRS------TGLQLVPDPGGAAFYGPK 498

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
               ++DAIGR WQ  TIQ DFN P RF+  Y  +      P+M+H A  GS+ERFIG++
Sbjct: 499 VSVQVRDAIGRTWQMSTIQYDFNQPERFDLEYAAADGTHQRPIMLHSAKLGSVERFIGVL 558

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
            E++ G  P+WLSP+Q  +  +  +  +Y    A +L S  + +ETD  ++    KIR  
Sbjct: 559 TEHYAGAFPVWLSPVQVRLVPVAEAFNDYVTGFAEVLGSRGIRVETDLSSDRFGKKIRNA 618

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           S  K+P I+I G ++A   ++  R    +    V L +A+ I+ 
Sbjct: 619 SKDKVPFILIAGGEDAEAGAVSFRLRDGSQVNGVVLDEAVRIIA 662


>gi|313235460|emb|CBY19737.1| unnamed protein product [Oikopleura dioica]
          Length = 800

 Score =  427 bits (1098), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 244/646 (37%), Positives = 369/646 (57%), Gaps = 31/646 (4%)

Query: 1   MPSD-IKLTFPDGSIK-NFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EG 57
           MP + IK+T PDG++K       T  D+A+SIS  LA   V   +NG+V DL+  +  + 
Sbjct: 135 MPKNPIKVTLPDGAVKEGTSWETTPLDIAKSISSGLANVVVCAKVNGQVWDLTRKLEGDC 194

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSD 117
           SIE++   D        HS AHI+ E ++  +    +  GP IEDGFYYD        S 
Sbjct: 195 SIELLKFSDKEGKETYWHSSAHILGECMERYFGGA-LCYGPDIEDGFYYDMWMGNTTISS 253

Query: 118 E--LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENV---T 172
           E  + ++EK   +++    PF +  ++ ++  ++F  K   +K  ++    A++N+   T
Sbjct: 254 EADMPKLEKLYYQMMKEKQPFQRLNVTKQQLIDMF--KHNPFKQRLI----AEKNIGDTT 307

Query: 173 LYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELT 232
           +Y+ G   D+CRGPH+  TG+ K   KL K +  YW G +++  L R+YG  +  +++LT
Sbjct: 308 VYKCGNLIDMCRGPHLPHTGKAKAC-KLYKTSATYWEGKADQESLQRVYGITFPDKKQLT 366

Query: 233 QYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDY 291
           +++ F EE++KRDHR++  + +L+      +G  FW  +G  I+  L  ++R +  K  +
Sbjct: 367 EWVNFQEEAKKRDHRRIGTQQELWTFDPVSAGSCFWLPRGAVIYNRLQDFIRSEYRKRGF 426

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           +E+ TP + +  LW+ SGHW  Y  +MF  K  DD       +A+KPMNCPGH  +F   
Sbjct: 427 KEVVTPNIFNSELWKTSGHWQHYEDDMFTFKVEDDK------WAMKPMNCPGHCVMFGSR 480

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI 411
           L+SY+ELP+R A+FG ++RNE SG+L GL RVR F QDDAH+FC +EQ+  E     +  
Sbjct: 481 LRSYKELPLRFADFGVLHRNELSGALSGLTRVRRFQQDDAHIFCAREQIEGEITAALDFF 540

Query: 412 ISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
             +Y  FGF    + LSTRPEK +G  A WD+AE ++K  L+T  ++++ +       G+
Sbjct: 541 KFVYDTFGF-TFELNLSTRPEKYLGEVADWDEAEGMLKNALNTFCSTNETKWELNP--GD 597

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
           GAFYGPK +  + DA+ R  Q  TIQ+DF LP RF   +V  + E+  PVMIHRA+ GSI
Sbjct: 598 GAFYGPKIDIKILDALKRRHQLATIQLDFQLPQRFKLKFVRDNKEET-PVMIHRAILGSI 656

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NET 590
           ER + I+ E+F G  P WLSP Q  V  I  S V +AQ IAN L    L  E D    +T
Sbjct: 657 ERCVAILTESFGGKWPFWLSPRQVRVVPIGKSQVPFAQSIANKLFDAGLEAEADPDCADT 716

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
            NY+IR   +++   I++ GDKE    +  +R   +   Q+  +LD
Sbjct: 717 FNYRIRRAQLEQWNFILVVGDKELEAGTCAVR---TRDAQQHGVLD 759


>gi|149238003|ref|XP_001524878.1| threonyl-tRNA synthetase [Lodderomyces elongisporus NRRL YB-4239]
 gi|146451475|gb|EDK45731.1| threonyl-tRNA synthetase [Lodderomyces elongisporus NRRL YB-4239]
          Length = 754

 Score =  427 bits (1098), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 239/628 (38%), Positives = 357/628 (56%), Gaps = 26/628 (4%)

Query: 5   IKLTFPDGSIKNFPVHATGS-DVAESISRSLAKKAVAVAINGKVCDLSDPVREG--SIEI 61
           IK+T  DG+ K      T   D+A SI +S A + V   +NG++ D+  P+ EG  +++ 
Sbjct: 104 IKITLKDGTEKEGTAWETSPMDIANSIGKSFADRQVIAKVNGELWDMPRPL-EGDVTLQF 162

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF---DKEQPFSSDE 118
           +  E P   AV  HS  HI+ E+ +  +    ++ GP  +DGF+YD    D     + ++
Sbjct: 163 LDFEHPEGKAVFWHSSVHILGESCECHYG-CHLSHGPPTDDGFFYDMSINDGTTFVTQED 221

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVE-ILESIPAKENVTLYRQG 177
              +E    + I     F +  ++ E   ++F   K  YKV+ I + IP   + T+YR G
Sbjct: 222 YPSLETIATKAIKEKQTFERLEMTKEDLLKMFAYNK--YKVKFISDKIPDGTSSTVYRCG 279

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
              DLC GPH+  +G++K F K++K + +Y+ GD++   L RIYG ++  ++ +T++L F
Sbjct: 280 PLIDLCAGPHIPHSGKIKAF-KVLKNSSSYFLGDASNDSLQRIYGVSFPDKKLMTEHLKF 338

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINT 296
           L E+ +RDHRK+ RE +LF   E   G   W   G +I+ TL+  +R +  K  YEE+ T
Sbjct: 339 LAEAAERDHRKIGREQELFIFNEVSPGSAMWLPHGTRIYNTLVDTLRYEYRKRGYEEVIT 398

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +    LW+ SGHW +Y+ NMF+ +   +T      F LKPMNCPGH  +F    +SYR
Sbjct: 399 PNMYSTKLWETSGHWQNYKENMFSFEVEKET------FGLKPMNCPGHCVLFKSRERSYR 452

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ELP R+A+FG ++RNE SG+L GL RVR F QDDAH+FCT EQ+  E   + +L+  +Y 
Sbjct: 453 ELPWRVADFGVIHRNEFSGALSGLTRVRRFQQDDAHIFCTTEQIGTEIAGVFDLLKKMYG 512

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
            FGFE   ++LSTRPEK VG    W+ AE  +   LD      +  +N     G+GAFYG
Sbjct: 513 IFGFE-FKMELSTRPEKYVGDLETWNSAEEKLANALDEFLGKGKWELNP----GDGAFYG 567

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFY-VNSHSEKCHPVMIHRAVFGSIERFI 535
           PK + ++ DA+ R +QC TIQ+DF LPSRF   Y  +S++    PVMIHRA+ GS+ER  
Sbjct: 568 PKIDIMISDALKRWFQCATIQLDFQLPSRFELEYRTDSNNALERPVMIHRAILGSVERMT 627

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH-LSIETDFRNETINYK 594
            I+ E++KG  P WLSP Q ++  +     EY +++  LL + H    + D    T+  K
Sbjct: 628 AILTEHYKGKWPFWLSPRQILIVPVGPKYYEYGEKLQKLLNNEHFFYCDIDVSGNTLPKK 687

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIR 622
           +R   + K   I I G+ E    S+ IR
Sbjct: 688 VRSGQMLKYNFIFIVGEAEEQNNSVNIR 715


>gi|313246933|emb|CBY35782.1| unnamed protein product [Oikopleura dioica]
          Length = 800

 Score =  427 bits (1097), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 241/632 (38%), Positives = 363/632 (57%), Gaps = 28/632 (4%)

Query: 1   MPSD-IKLTFPDGSIK-NFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EG 57
           MP + IK+T PDG++K       T  D+A+SIS  LA   V   +NG+V DL+  +  + 
Sbjct: 135 MPKNPIKVTLPDGAVKEGTSWETTPLDIAKSISSGLANVVVCAKVNGQVWDLTRKLEGDC 194

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSD 117
           SIE++   D        HS AHI+ E ++  +    +  GP IEDGFYYD        S 
Sbjct: 195 SIELLKFSDKEGKETYWHSSAHILGECMERYFGGA-LCYGPDIEDGFYYDMWMGNTTISS 253

Query: 118 E--LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENV---T 172
           E  + ++EK   +++    PF +  ++ ++  ++F  K   +K  ++    A++N+   T
Sbjct: 254 EADMPKLEKLYYQMMKEKQPFQRLNVTKQQLIDMF--KHNPFKQRLI----AEKNIGDTT 307

Query: 173 LYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELT 232
           +Y+ G   D+CRGPH+  TG+ K   KL K +  YW G +++  L R+YG  +  +++LT
Sbjct: 308 VYKCGNLIDMCRGPHLPHTGKAKAC-KLYKTSATYWEGKADQESLQRVYGITFPDKKQLT 366

Query: 233 QYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDY 291
           +++ F EE++KRDHR++  + +L+      +G  FW  +G  I+  L  ++R +  K  +
Sbjct: 367 EWVNFQEEAKKRDHRRIGTQQELWTFDPVSAGSCFWLPRGAVIYNRLQDFIRSEYRKRGF 426

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           +E+ TP + +  LW+ SGHW  Y  +MF  K  DD       +A+KPMNCPGH  +F   
Sbjct: 427 KEVVTPNIFNSELWKTSGHWQHYEDDMFTFKVEDDK------WAMKPMNCPGHCVMFGSR 480

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI 411
           L+SY+ELP+R A+FG ++RNE SG+L GL RVR F QDDAH+FC +EQ+  E     +  
Sbjct: 481 LRSYKELPLRFADFGVLHRNELSGALSGLTRVRRFQQDDAHIFCAREQIEGEITAALDFF 540

Query: 412 ISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
             +Y  FGF    + LSTRPEK +G  A WD+AE ++K  L+T  ++++ +       G+
Sbjct: 541 KFVYDTFGF-TFELNLSTRPEKYLGEVADWDEAEGMLKNALNTFCSTNETKWELNP--GD 597

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
           GAFYGPK +  + DA+ R  Q  TIQ+DF LP RF   +V  + E+  PVMIHRA+ GSI
Sbjct: 598 GAFYGPKIDIKILDALKRRHQLATIQLDFQLPQRFKLKFVRDNKEET-PVMIHRAILGSI 656

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NET 590
           ER + I+ E+F G  P WLSP Q  V  I  S V +AQ IAN L    L  E D    +T
Sbjct: 657 ERCVAILTESFGGKWPFWLSPRQVRVVPIGKSQVPFAQSIANKLFDAGLEAEADPDCADT 716

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIR 622
            NY+IR   +++   I++ GDKE    +  +R
Sbjct: 717 FNYRIRRAQLEQWNFILVVGDKELEAGTCAVR 748


>gi|12845562|dbj|BAB26799.1| unnamed protein product [Mus musculus]
          Length = 722

 Score =  427 bits (1097), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 243/625 (38%), Positives = 356/625 (56%), Gaps = 25/625 (4%)

Query: 5   IKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           IK+T PDG  +       T   +A  IS+ LA   V   +N  V DL  P+  + ++E++
Sbjct: 82  IKVTLPDGKQVDAESWKTTPYQIACGISQGLADNTVVAKVNKVVWDLDRPLETDCTLELL 141

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQ 121
             ED  + AV  HS AHIM EA++ ++    +  G  IE+GFYYD + +E   SS++ + 
Sbjct: 142 KFEDEEAQAVYWHSSAHIMGEAMERVYGGC-LCYGSPIENGFYYDMYLEEGGVSSNDFSS 200

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +E   ++II     F +  +  E   E+F+  K  +K  IL         T+YR G   D
Sbjct: 201 LETLCKKIIKEKQTFERLEVKKETLLEMFKYNK--FKCRILNEKVNTPTTTVYRCGPLID 258

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHVR TG+ K   K+ K +  YW G ++   L RIYG ++   + L ++  F EE+
Sbjct: 259 LCRGPHVRHTGKTKTL-KIHKNSSTYWEGKADMETLQRIYGISFPDPKLLKEWEKFQEEA 317

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVL 300
           + RDH K+ R+ +L+   E   G  F+  KG  I+ TL+ ++R +  K  ++E+ TP + 
Sbjct: 318 KNRDHGKIGRDQELYFFHELSPGSCFFLPKGAYIYNTLMEFIRSEYRKRGFQEVVTPNIF 377

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  LW  SGHW  Y  NMF+ +   +       FALKPMNCPGH  +F+H  +S+RELP+
Sbjct: 378 NSRLWMTSGHWQHYSENMFSFEVEKEQ------FALKPMNCPGHCLMFDHRPRSWRELPL 431

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLA+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E     + + ++Y  FGF
Sbjct: 432 RLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSVFGF 491

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
               + LSTRPEK +G   +W+ AE  ++  L+      +  +N     G+GAFYGPK +
Sbjct: 492 -SFKLNLSTRPEKFLGDIEIWNQAEKQLENSLNEFGEKWE--LNP----GDGAFYGPKID 544

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH--SEKCHPVMIHRAVFGSIERFIGIM 538
             +KDAIGR  QC TIQ+DF LP RFN  YV SH   +K  PV++HRA+ GS+ER I I+
Sbjct: 545 IQIKDAIGRYHQCATIQLDFQLPIRFNLTYV-SHDGDDKKRPVIVHRAILGSVERMIAIL 603

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIRE 597
            EN+ G  P WLSP Q +V  +  +  EYAQ++           +TD     T+N KIR 
Sbjct: 604 TENYGGKWPFWLSPRQVMVVPVGPTCDEYAQKVRQQFHDAKFMADTDLDPGCTLNKKIRN 663

Query: 598 HSIKKIPIIIICGDKEASERSIGIR 622
             + +   I++ G+KE +  ++ IR
Sbjct: 664 AQLAQYNFILVVGEKEKASGTVNIR 688


>gi|315098581|gb|EFT70557.1| threonyl-tRNA synthetase [Propionibacterium acnes HL059PA2]
          Length = 689

 Score =  427 bits (1097), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 238/644 (36%), Positives = 351/644 (54%), Gaps = 50/644 (7%)

Query: 36  KKAVAVAINGKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           +  VA+ ++G + DL   + +G+ +E +       L +IRHS  H+MA+AVQ ++PEV +
Sbjct: 37  RAVVAMRVDGNLVDLQRELHDGAEVEPVEATSEDGLNIIRHSATHVMAQAVQQLYPEVNL 96

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            IGP I DGFYYDF   +P + + L+++EK+M+ I+  +  F+++  + E ARE  E   
Sbjct: 97  GIGPFITDGFYYDFGNIEPVTPEVLSELEKRMKRIVKENQRFVRRVTTEESARE--ELAD 154

Query: 155 EAYKVEILESIP----------AKENVTLY----RQGE--WFDLCRGPHVRSTGQVKKFF 198
           + YK+E++ +                +T+Y    R GE  W DLCRGPHV ST  +   F
Sbjct: 155 QPYKLELIGTKGKGAEGASVEVGGGELTIYDNVRRNGEVAWKDLCRGPHVPSTKYLANTF 214

Query: 199 KLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI 258
            L K + AYW+GD     L RIYGTAW ++  L  Y   ++E+E+RDHRKL  E+DLF  
Sbjct: 215 ALTKFSAAYWKGDQANDQLQRIYGTAWASRDGLAAYQQRIKEAERRDHRKLGAELDLFSF 274

Query: 259 AED-GSGVIFWHRKGWKIFQTLIS--YMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYR 315
            E+ G G++ +H KG  + + LI    + R ++  +  ++TP++    L+  SGH   Y 
Sbjct: 275 PEEIGPGLVVFHPKG-AMLRHLIEEHVIARHMEAGFNFVHTPEITKGGLFHTSGHLPYYA 333

Query: 316 ANMFAVKCAD-------DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV 368
             MF     D       +  +  + + LK MNCP H  +F    +SYRELP+R  E G  
Sbjct: 334 DTMFPPMLVDEERDEEGNVTRAGQEYYLKAMNCPMHNLIFRSRGRSYRELPLRFFEMGHD 393

Query: 369 YRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLS 428
           YR E SG +HGL R+RGF QDD+H +CT+EQ   E  K     +SI  DFG     ++LS
Sbjct: 394 YRYEKSGVVHGLTRMRGFAQDDSHTYCTREQAPGEIKKQIEFFLSILADFGLNDFYLELS 453

Query: 429 TR------PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL----GEGAFYGPK 478
           TR       EK +GSD  W  A +     LD +  S      TG+ L    G  AFYGPK
Sbjct: 454 TRESDSAKKEKFIGSDEDWQVATD----TLDQVCRS------TGLQLVPDPGGAAFYGPK 503

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
               ++DAIGR WQ  TIQ DFN P RF+  Y  +      P+M+H A  GS+ERFIG++
Sbjct: 504 VSVQVRDAIGRTWQMSTIQYDFNQPERFDLEYAAADGTHQRPIMLHSAKLGSVERFIGVL 563

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
            E++ G  P+WLSP+Q  +  +  +  +Y    A +L S  + +ETD  ++    KIR  
Sbjct: 564 TEHYAGAFPVWLSPVQVRLVPVAEAFNDYVTGFAEVLGSRGIRVETDLSSDRFGKKIRNA 623

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           S  K+P I+I G ++A   ++  R    +    V L +A+ I+ 
Sbjct: 624 SKDKVPFILIAGGEDAEAGAVSFRLRDGSQVNGVVLDEAVRIIA 667


>gi|315084265|gb|EFT56241.1| threonyl-tRNA synthetase [Propionibacterium acnes HL027PA2]
          Length = 689

 Score =  427 bits (1097), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 238/644 (36%), Positives = 351/644 (54%), Gaps = 50/644 (7%)

Query: 36  KKAVAVAINGKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           +  VA+ ++G + DL   + +G+ +E +       L +IRHS  H+MA+AVQ ++PEV +
Sbjct: 37  RAVVAMRVDGNLVDLQRELHDGAEVEPVEATSEDGLNIIRHSATHVMAQAVQQLYPEVNL 96

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            IGP I DGFYYDF   +P + + L+++EK+M+ I+  +  F+++  + E ARE  E   
Sbjct: 97  GIGPFITDGFYYDFGNIEPVTPEVLSELEKRMKRIVKENQRFVRRVTTEESARE--ELAD 154

Query: 155 EAYKVEILESIP----------AKENVTLY----RQGE--WFDLCRGPHVRSTGQVKKFF 198
           + YK+E++ +                +T+Y    R GE  W DLCRGPHV ST  +   F
Sbjct: 155 QPYKLELIGTKGKGAEGASVEVGGGELTIYDNVRRNGEVAWKDLCRGPHVPSTKYLANTF 214

Query: 199 KLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI 258
            L K + AYW+GD     L RIYGTAW +++ L  Y   ++E+E+RDHRKL  E+DLF  
Sbjct: 215 ALTKFSAAYWKGDQANDQLQRIYGTAWASREGLAAYQQRIKEAERRDHRKLGAELDLFSF 274

Query: 259 AED-GSGVIFWHRKGWKIFQTLIS--YMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYR 315
            E+ G G++ +H KG  + + LI    + R ++  +  ++TP++    L+  SGH   Y 
Sbjct: 275 PEEIGPGLVVFHPKG-AMLRHLIEEHVIARHMEAGFNFVHTPEITKGGLFHTSGHLPYYA 333

Query: 316 ANMFAVKCAD-------DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV 368
             MF     D       +  +  + + LK MNCP H  +F    +SYRELP+R  E G  
Sbjct: 334 DTMFPPMLVDEERDEEGNVTRAGQEYYLKAMNCPMHNLIFRSRGRSYRELPLRFFEMGHD 393

Query: 369 YRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLS 428
           YR E SG +HGL R+RGF QDD+H +CT+EQ   E  K     +SI  DFG     ++LS
Sbjct: 394 YRYEKSGVVHGLTRMRGFAQDDSHTYCTREQAPGEIKKQIEFFLSILADFGLNDFYLELS 453

Query: 429 TR------PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL----GEGAFYGPK 478
           TR       EK +GSD  W  A +     LD +  S      TG+ L    G  AFYGPK
Sbjct: 454 TRESDSAKKEKFIGSDEDWQVATD----TLDQVCRS------TGLQLVPDPGGAAFYGPK 503

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
               ++DAIGR WQ  TIQ DFN P RF+  Y  +      P+M+H A  GS+ERFIG++
Sbjct: 504 VSVQVRDAIGRTWQMSTIQYDFNQPERFDLEYAAADGTHQRPIMLHSAKLGSVERFIGVL 563

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
            E++ G  P+WLSP+Q  +  +  +  +Y    A +L S  + +ETD  ++    KIR  
Sbjct: 564 TEHYAGAFPVWLSPVQVRLVPVAEAFNDYVTGFAEVLGSRGIRVETDLSSDRFGKKIRNA 623

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           S  K+P I+I G ++A   ++  R    +    V L  A+ I+ 
Sbjct: 624 SKDKVPFILIAGGEDAEAGAVSFRLRDGSQVNGVVLDGAVRIIA 667


>gi|291404015|ref|XP_002718268.1| PREDICTED: threonyl-tRNA synthetase-like 2-like [Oryctolagus
           cuniculus]
          Length = 709

 Score =  426 bits (1096), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 239/626 (38%), Positives = 357/626 (57%), Gaps = 22/626 (3%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAH 79
            T   VA +ISR LA+ AV   ++G++ DL  P++ + ++E++T     + AV  HS AH
Sbjct: 86  TTPYQVAAAISRELAESAVVAKVDGELWDLDRPLQGDCTLELLTFHSEEAQAVYWHSSAH 145

Query: 80  IMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQIEKKMQEIIARDSPFLK 138
           ++ EA++ ++    +  GP IE+GFYYD F +++  SS EL  +E   + II    PF +
Sbjct: 146 VLGEAME-LYYGGHLCYGPPIENGFYYDMFIEDRAVSSTELPALENMCKAIIKERQPFER 204

Query: 139 QYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFF 198
             +S E   E+F+  K  +K  IL         T+YR G   DLC+GPHVR TG++K   
Sbjct: 205 LEVSKEVLLEMFKYNK--FKCRILNEKVDTPTTTVYRCGPLVDLCKGPHVRHTGKIKAI- 261

Query: 199 KLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI 258
           K+ K +  YW G      L RIYG ++   + +  +    EE++ RDHRK+ +E +LF  
Sbjct: 262 KIFKNSSTYWEGSPEMETLQRIYGISFPDNKMMKTWEQVQEEAKNRDHRKIGKEQELFFF 321

Query: 259 AEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRAN 317
            +   G  F+  +G  ++ TL+  +R +  K D+ E+ +P V +  LW+ SGHW  Y  N
Sbjct: 322 HDVSPGSCFFLPRGAFVYSTLMDLIREEYHKRDFLEVLSPNVYNSKLWETSGHWQHYSEN 381

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           MF  +   +T      FALKPMNCPGH  +F H  +S+RE+PVR A+FG ++RNE SG+L
Sbjct: 382 MFTFRVEKET------FALKPMNCPGHCLMFAHRPRSWREMPVRFADFGVLHRNELSGTL 435

Query: 378 HGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGS 437
            GL RVR F QDDAH+FCT EQ+  E       + S+Y  FGF    + LSTRPE  +G 
Sbjct: 436 SGLTRVRRFQQDDAHIFCTVEQIEEEIKGCLQFLQSVYSTFGF-TFQLNLSTRPENFLGE 494

Query: 438 DALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ 497
             +W +AE  ++  L  ++     ++N     G+GAFYGPK +  +KDAIGR  QC TIQ
Sbjct: 495 SEMWAEAEKQLQNSL--VEFGKPWKLNP----GDGAFYGPKIDIKIKDAIGRYHQCATIQ 548

Query: 498 VDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI 556
           +DF LP RFN  YV+    +K  PV+IHRA  GS+ER + I+ EN  G  PLWLSP Q +
Sbjct: 549 LDFQLPIRFNLTYVSKDGDDKKRPVIIHRATLGSVERMVAILSENCGGKWPLWLSPRQVM 608

Query: 557 VTTITSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEAS 615
           V  +  +  +YA ++ N         + D  +  T+N KIR   + +   I++ G+KE +
Sbjct: 609 VIPVGPTCEKYALQVYNEFFEEGFMADVDLDHSCTLNKKIRNAQLAQYNFILVVGEKEMA 668

Query: 616 ERSIGIRRFGSTTTQKVSLLDAIPIL 641
             ++ +R   +    ++S++ AI  L
Sbjct: 669 NNAVNVRTRDNKIHGEISVISAIEKL 694


>gi|114600744|ref|XP_001153847.1| PREDICTED: threonyl-tRNA synthetase isoform 7 [Pan troglodytes]
          Length = 715

 Score =  426 bits (1096), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 242/623 (38%), Positives = 351/623 (56%), Gaps = 29/623 (4%)

Query: 5   IKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEII 62
           IK+T PDG  +       T   +A  IS+ LA   V   +N  V DL  P+ E  S+E++
Sbjct: 83  IKVTLPDGKQVDAESWKTTPYQIACGISQGLADNTVIAKVNNLVWDLDRPLEEDCSLELL 142

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQ 121
             ED  + AV  HS AHIM EA++ ++    +  GP IE+GFYYD + +E   SS++ + 
Sbjct: 143 KFEDEEAQAVYWHSSAHIMGEAMERVYGGC-LCYGPPIENGFYYDMYLEEGGVSSNDFSS 201

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +E   ++II     F +  +  E    +F+  K  +K  IL         T+YR G   D
Sbjct: 202 LEALCKKIIKEKQAFERLEVKKETLLAMFKYNK--FKCRILNEKVNTPTTTVYRCGPLID 259

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHVR TG++K   K+ K +  YW G ++   L RIYG ++   + L ++  F EE+
Sbjct: 260 LCRGPHVRHTGKIKAL-KIHKNSSTYWEGKADMETLQRIYGISFPDPKMLKEWEKFQEEA 318

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVL 300
           + RDHRK+ R+ +L+   E   G  F+  KG  I+  LI ++R +  K  ++E+ TP + 
Sbjct: 319 KNRDHRKIGRDQELYFFHELSPGSCFFLPKGAYIYNALIEFIRSEYRKRGFQEVVTPNIF 378

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  LW  SGHW  Y  NMF+ +   +       FALKPMNCPGH  +F+H  +S+RELP+
Sbjct: 379 NSRLWMTSGHWQHYSENMFSFEVEKEL------FALKPMNCPGHCLMFDHRPRSWRELPL 432

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLA+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E     + + ++Y  FGF
Sbjct: 433 RLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSVFGF 492

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
               + LSTRPEK +G   +WD AE  ++  L+      +  +N+    G+GAFYGPK +
Sbjct: 493 -SFKLNLSTRPEKFLGDIEVWDQAEKQLENSLNEFGEKWE--LNS----GDGAFYGPKID 545

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
             +KDAIGR  QC TIQ+DF LP RFN  Y         PV++HRA+ GS+ER I I+ E
Sbjct: 546 IQIKDAIGRYHQCATIQLDFQLPIRFNLTYK-------RPVIVHRAILGSVERMIAILTE 598

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIREHS 599
           N+ G  P WLSP Q +V  +  +  EYAQ++           + D     T+N KIR   
Sbjct: 599 NYGGKWPFWLSPRQVMVVPVGPTCDEYAQKVRQQFHDAKFMADIDLDPGCTLNKKIRNAQ 658

Query: 600 IKKIPIIIICGDKEASERSIGIR 622
           + +   I++ G+KE    ++ IR
Sbjct: 659 LAQYNFILVVGEKEKISGTVNIR 681


>gi|145594327|ref|YP_001158624.1| threonyl-tRNA synthetase [Salinispora tropica CNB-440]
 gi|145303664|gb|ABP54246.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Salinispora
           tropica CNB-440]
          Length = 671

 Score =  426 bits (1096), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 244/630 (38%), Positives = 351/630 (55%), Gaps = 60/630 (9%)

Query: 45  GKVCDLS-DPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG 103
           G++ DL   P +E  +E +  + P  LAV+RHS AH++A+AVQ ++PE ++ IGP IE+G
Sbjct: 46  GQLRDLDWTPEQETMVEPVGIDTPDGLAVLRHSTAHVLAQAVQDLFPEAKLGIGPPIENG 105

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESK----KEAYKV 159
           FYYDF  +QPF  ++L ++EK+MQEII        Q     + R+L E++     E +K+
Sbjct: 106 FYYDFAVDQPFQPEDLTKLEKRMQEIIKS-----GQRFRRRRFRDLDEARGELAAEPFKL 160

Query: 160 EILE---SIPAKENVTLYRQGE---------------WFDLCRGPHVRSTGQVKKFFKLM 201
           E++E          V     GE               W DLCRGPH+ +T ++   FKLM
Sbjct: 161 ELIELKGDGLDSSQVMEVGGGELTSYDNLAADADKVCWSDLCRGPHLPNT-RLIGAFKLM 219

Query: 202 KVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED 261
           + A AYWRG    P L R+YGTAW T+ EL  YL  LEE+ +RDHRKL  ++DLF   ++
Sbjct: 220 RSAAAYWRGSEKNPQLQRVYGTAWPTRDELKAYLRLLEEAARRDHRKLGADLDLFSFPDE 279

Query: 262 -GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMF 319
            GSG+  +H KG  + +T+  Y+R R I++ ++ + TP +  + L+  SGH   Y   MF
Sbjct: 280 IGSGLPVFHPKGGVLKRTMEDYVRSRHIEEGFDYVGTPHISKEGLFHTSGHLPYYADGMF 339

Query: 320 A---VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
                + AD        + LK MNCP H  ++    +SYRELP+RL EFGSVYR E SG 
Sbjct: 340 PPMQFEGAD--------YYLKAMNCPMHNLIYRSRGRSYRELPMRLFEFGSVYRYEKSGV 391

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR----PE 432
           +HGL RVRGFTQDD+H +CTKEQ   E   +   ++ + +DFG     ++LSTR    P+
Sbjct: 392 IHGLTRVRGFTQDDSHSYCTKEQAPAEIKHLLAFVLGLLQDFGITDFFLELSTRDDTKPD 451

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL----GEGAFYGPKFEYILKDAIG 488
           K VGS   W  A  +++          Q   +TG+ L    G  AFYGPK     KDAIG
Sbjct: 452 KFVGSAEDWATATAVLE----------QCARDTGLELVPDPGGAAFYGPKISVQAKDAIG 501

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPL 548
           R WQ  TIQ DFN P+ F   Y  +   +  P+MIH A FGSIERFIG++ E++ G  P 
Sbjct: 502 RTWQMSTIQYDFNQPAGFGLEYQAADGTRQQPIMIHCAKFGSIERFIGVLTEHYAGAFPA 561

Query: 549 WLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIII 608
           WL+P+Q +   I +   EY       L++  +  + D  ++ +  KIR    +KIP ++I
Sbjct: 562 WLAPVQVVGIPIRAEHTEYLDGFVAALRAAGIRAQVDAGDDRMQKKIRTAQQQKIPFMVI 621

Query: 609 CGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
            GD + +  ++  R    +    V   +A+
Sbjct: 622 AGDDDVAAGTMSFRYRDGSQRNGVPAAEAV 651


>gi|225424719|ref|XP_002265302.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|296086530|emb|CBI32119.3| unnamed protein product [Vitis vinifera]
          Length = 686

 Score =  426 bits (1096), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 233/626 (37%), Positives = 363/626 (57%), Gaps = 26/626 (4%)

Query: 5   IKLTFPDGSIKNFPVHATGS-DVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIEI-- 61
           IK+T PDG++K     AT   D+A  IS+ LA  A+   +NG + D+S P+ EG  E+  
Sbjct: 52  IKITLPDGTVKEGKKWATTPLDIAREISKGLASNALISLVNGILWDMSRPL-EGDCELKL 110

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE--DGFYYD-FDKEQPFSSDE 118
            T +         HS AHI+ +A++  +   ++ IGP     +GFYYD F  E   + D 
Sbjct: 111 FTFDSDEGRDTFWHSSAHILGQALEVAYG-CKLCIGPCTTRGEGFYYDAFYGELGLNEDH 169

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
             +IE    + +    PF +  +S  +A ELF   + ++K+EI+  +P  + +T+YR G 
Sbjct: 170 FKEIESGALKAVGEKQPFERIEVSRNQALELF--SENSFKIEIINDLPEDKTITVYRCGP 227

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLCRGPH+ +T  VK F   +K + AYWRG+ +R  L R+YG ++   + L +Y+  +
Sbjct: 228 LVDLCRGPHIPNTSFVKAF-ACLKASSAYWRGNKDRESLQRVYGISYPDSKRLKEYIARI 286

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE++K DHR L  + +LF       G  F+   G +I+  L+ +++ + ++  Y E+ +P
Sbjct: 287 EEAKKYDHRLLGVKQELFFCHPLSPGSWFFLPHGGRIYNKLMEFIKAQYRERGYHEVFSP 346

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  LW+ SGH  +Y+ NMF  +       + + F LKPMNCPGH  +F H ++SYRE
Sbjct: 347 TMYNMQLWETSGHAANYKENMFVFEV------EKQEFGLKPMNCPGHCLMFEHRVRSYRE 400

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+RLA+FG ++RNE SG+L GL RVR F QDDAH+FC + Q+ +E + +   I   Y  
Sbjct: 401 LPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVMGVLEFINYAYNI 460

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF    +KLSTRPEK +G    W+ AE  +   LD  ++     IN     G+GAFYGP
Sbjct: 461 FGF-TYELKLSTRPEKYLGDLETWEKAEAALTEALD--QSGKPWEINE----GDGAFYGP 513

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFY-VNSHSEKCHPVMIHRAVFGSIERFIG 536
           K +  + DA+ R +QC T+Q+DF LPSRF+  Y     +++  PVMIHRA+ GS+ER   
Sbjct: 514 KIDISVSDALSRKFQCATLQLDFQLPSRFDLSYSAEDEAKRERPVMIHRAILGSVERMFA 573

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           I++E++KG  P WLSP QAIV  ++  +  YA ++ + +      ++ D  +  I  K+R
Sbjct: 574 ILLEHYKGKWPFWLSPRQAIVCPVSEKSQPYALKVRDQIHQAGYYVDVDTTDRKIQKKVR 633

Query: 597 EHSIKKIPIIIICGDKEASERSIGIR 622
           E  + +   I++ G++EA+   + +R
Sbjct: 634 EAQLAQYNYILVVGEEEANTGQVSVR 659


>gi|114659237|ref|XP_510628.2| PREDICTED: threonyl-tRNA synthetase-like 2 [Pan troglodytes]
          Length = 801

 Score =  426 bits (1096), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 237/611 (38%), Positives = 350/611 (57%), Gaps = 31/611 (5%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAH 79
            T   VA  IS+ LA+  V   +NG++ DL  P+  + S+E++T ++  + AV  HS AH
Sbjct: 179 TTPYQVAAEISQELAESTVIAKVNGELWDLDRPLEGDSSLELLTFDNEEAQAVYWHSSAH 238

Query: 80  IMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQIEKKMQEIIARDSPFLK 138
           I+ EA++ ++    +  G  IE+GFYYD F +++  SS EL+ +E   + II    PF +
Sbjct: 239 ILGEAME-LYYGGHLCYGLPIENGFYYDVFIEDRAVSSTELSALENICKAIIKEKQPFER 297

Query: 139 QYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFF 198
             +S E   E+F+  K  +K  IL         T+YR G   DLC+GPHVR TG++K   
Sbjct: 298 LEVSKEILLEMFKYNK--FKCRILNEKVNTATTTVYRCGPLIDLCKGPHVRHTGKIKTI- 354

Query: 199 KLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI 258
           K+ K +  YW G+     L RIYG ++   + +  +  F EE++ RDHRK+ +E +LF  
Sbjct: 355 KIFKNSSTYWEGNPEMETLQRIYGISFPDNKMMRDWEKFQEEAKNRDHRKIGKEQELFFF 414

Query: 259 AEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRAN 317
            +   G  F+  +G  I+ TL  ++R +  K D+ E+ +P + +  LW+ SGHW  Y  N
Sbjct: 415 HDLSPGSCFFLPRGAFIYNTLTDFIREEYHKRDFTEVLSPNMYNSKLWEASGHWQHYSEN 474

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           MF  +   DT      FALKPMNCPGH  +F H  +S+RE+P+R A+FG ++RNE SG+L
Sbjct: 475 MFTFEIEKDT------FALKPMNCPGHCLMFAHRPRSWREMPIRFADFGVLHRNELSGTL 528

Query: 378 HGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGS 437
            GL RVR F QDDAH+FCT EQ+  E       + S+Y  FGF    + LSTRPE  +G 
Sbjct: 529 SGLTRVRRFQQDDAHIFCTVEQIEEEIKGCLRFLQSVYSTFGF-SFQLNLSTRPENFLGE 587

Query: 438 DALWDDAENIMKGVLDTIKNSSQD-----RINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
             +W++AE         ++NS  D     ++N G    +GAFYGPK +  +KDAIGR  Q
Sbjct: 588 IEMWNEAEK-------QLQNSLMDFGEPWKMNPG----DGAFYGPKIDIKIKDAIGRYHQ 636

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
           C TIQ+DF LP RFN  Y+N       PV+IHRA+ GS+ER I I+ EN+ G  P WLSP
Sbjct: 637 CATIQLDFQLPIRFNLTYMNKVGILGRPVIIHRAILGSVERMIAILSENYGGKWPFWLSP 696

Query: 553 IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF-RNETINYKIREHSIKKIPIIIICGD 611
            Q +V  +  +  +YA ++++         + D   N T+N KIR   + +   I++ G+
Sbjct: 697 RQVMVIPVGPTCEKYALQVSSEFFEEGFMADVDLDHNCTLNKKIRNAQLAQYNFILVVGE 756

Query: 612 KEASERSIGIR 622
           KE  + ++ +R
Sbjct: 757 KEKIDNAVNVR 767


>gi|296194829|ref|XP_002745122.1| PREDICTED: threonyl-tRNA synthetase, cytoplasmic [Callithrix
           jacchus]
          Length = 723

 Score =  426 bits (1096), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 243/625 (38%), Positives = 355/625 (56%), Gaps = 25/625 (4%)

Query: 5   IKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEII 62
           IK+T PDG  +       T   +A  IS+ LA   V   +N  V DL  P+ E  ++ ++
Sbjct: 83  IKVTLPDGKQVDAESWKTTPYQIACGISQGLADNTVIAKVNNVVWDLDRPLEEDCTLALL 142

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQ 121
             ED  + AV  HS AHIM EA++ ++    +  GP IE+GFYYD + +E   SS++ + 
Sbjct: 143 KFEDEEAQAVYWHSSAHIMGEAMERVYGGC-LCYGPPIENGFYYDMYLEEGGVSSNDFSS 201

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +E   ++II     F +  +  E    +F+  K  +K  IL         T+YR G   D
Sbjct: 202 LEALCKKIIKEKQAFERLEVKKETLLAMFKYNK--FKCRILNEKVNTPTTTVYRCGPLID 259

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHVR TG++K   K+ K +  YW G ++   L RIYG ++   + L ++  F EE+
Sbjct: 260 LCRGPHVRHTGKIKAL-KIHKNSSTYWEGKADMETLQRIYGISFPDPKMLKEWEKFQEEA 318

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVL 300
           + RDHRK+ R+ +L+   E   G  F+  KG  I+  LI ++R +  K  ++E+ TP + 
Sbjct: 319 KNRDHRKIGRDQELYFFHELSPGSCFFLPKGAYIYNALIDFIRSEYRKRGFQEVVTPNIY 378

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  LW  SGHW  Y  NMF+ +   +       FALKPMNCPGH  +F+H  +S+RELP+
Sbjct: 379 NSRLWMTSGHWQHYSENMFSFEVEKEQ------FALKPMNCPGHCLMFDHRPRSWRELPL 432

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLA+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E     + +  +Y  FGF
Sbjct: 433 RLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRMVYSVFGF 492

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
               + LSTRPEK +G   +W+ AE  ++  L+      +  +N+    G+GAFYGPK +
Sbjct: 493 -SFKLNLSTRPEKFLGDIEVWNQAEKQLENSLNEFGEKWE--LNS----GDGAFYGPKID 545

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH--SEKCHPVMIHRAVFGSIERFIGIM 538
             +KDAIGR  QC TIQ+DF LP RFN  +V SH   +K  PV++HRA+ GS+ER I I+
Sbjct: 546 IQIKDAIGRYHQCATIQLDFQLPIRFNLTFV-SHDGDDKKRPVIVHRAILGSVERMIAIL 604

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIRE 597
            EN+ G  P WLSP Q +V  +  S  EYAQ++     +     + D     T+N KIR 
Sbjct: 605 TENYGGKWPFWLSPRQVMVVPVGPSCDEYAQKVRQQFHAAKFMADVDLDPGCTLNKKIRN 664

Query: 598 HSIKKIPIIIICGDKEASERSIGIR 622
             + +   I++ G+KE    ++ IR
Sbjct: 665 AQLAQYNFILVVGEKEKISGTVNIR 689


>gi|56789234|gb|AAH88355.1| TARS protein [Homo sapiens]
          Length = 682

 Score =  426 bits (1096), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 240/615 (39%), Positives = 351/615 (57%), Gaps = 23/615 (3%)

Query: 5   IKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEII 62
           IK+T PDG  +       T   +A  IS+ LA   V   +N  V DL  P+ E  ++E++
Sbjct: 83  IKVTLPDGKQVDAESWKTTPYQIACGISQGLADNTVIAKVNNVVWDLDRPLEEDCTLELL 142

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQ 121
             ED  + AV  HS AHIM EA++ ++    +  GP IE+GFYYD + +E   SS++ + 
Sbjct: 143 KFEDEEAQAVYWHSSAHIMGEAMERVYGGC-LCYGPPIENGFYYDMYLEEGGVSSNDFSS 201

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +E   ++II     F +  +  E    +F+  K  +K  IL         T+YR G   D
Sbjct: 202 LEALCKKIIKEKQAFERLEVKKETLLAMFKYNK--FKCRILNEKVNTPTTTVYRCGPLID 259

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHVR TG++K   K+ K +  YW G ++   L RIYG ++   + L ++  F EE+
Sbjct: 260 LCRGPHVRHTGKIKAL-KIHKNSSTYWEGKADMETLQRIYGISFPDPKMLKEWEKFQEEA 318

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVL 300
           + RDHRK+ R+ +L+   E   G  F+  KG  I+  LI ++R +  K  ++E+ TP + 
Sbjct: 319 KNRDHRKIGRDQELYFFHELSPGSCFFLPKGAYIYNALIEFIRSEYRKRGFQEVVTPNIF 378

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  LW  SGHW  Y  NMF+ +   +       FALKPMNCPGH  +F+H  +S+RELP+
Sbjct: 379 NSRLWMTSGHWQHYSENMFSFEVEKEL------FALKPMNCPGHCLMFDHRPRSWRELPL 432

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLA+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E     + + ++Y  FGF
Sbjct: 433 RLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSVFGF 492

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
               + LSTRPEK +G   +WD AE  ++  L+      +  +N+    G+GAFYGPK +
Sbjct: 493 -SFKLNLSTRPEKFLGDIEVWDQAEKQLENSLNEFGEKWE--LNS----GDGAFYGPKID 545

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIGIMI 539
             +KDAIGR  QC TIQ+DF LP RFN  YV+    +K  PV++HRA+ GS+ER I I+ 
Sbjct: 546 IQIKDAIGRYHQCATIQLDFQLPIRFNLTYVSHDGDDKKRPVIVHRAILGSVERMIAILT 605

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIREH 598
           EN+ G  P WLSP Q +V  +  +  EYAQ++           + D     T+N KIR  
Sbjct: 606 ENYGGKWPFWLSPRQVMVVPVGPTCDEYAQKVRQQFHDAKFMADIDLDPGCTLNKKIRNA 665

Query: 599 SIKKIPIIIICGDKE 613
            + +   I++ G+K+
Sbjct: 666 QLAQYNFILVVGEKK 680


>gi|73954351|ref|XP_536509.2| PREDICTED: similar to threonyl-tRNA synthetase [Canis familiaris]
          Length = 789

 Score =  426 bits (1096), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 246/654 (37%), Positives = 368/654 (56%), Gaps = 32/654 (4%)

Query: 5   IKLTFPDGSIKNFPV-HATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEII 62
           IK+T PDG   N      T   +A  IS+ LA   V   +N  V DL  P+ E  ++E++
Sbjct: 140 IKVTLPDGKQVNAESWKTTPYQIACGISQGLADNTVIAKVNQVVWDLDRPLEEDCTLELL 199

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQ 121
             ED  + AV  HS AHIM EA++ ++    +  GP IE+GFYYD + +E   SS++ + 
Sbjct: 200 KFEDEEAQAVYWHSSAHIMGEAMERVYGGC-LCYGPPIENGFYYDMYLEEGGVSSNDFSS 258

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +E   ++II     F +  +  E   E+F+  K  +K  IL         T+YR G   D
Sbjct: 259 LEALCKKIIKEKQTFERLEVKKETLLEMFKYNK--FKCRILNEKVNTPTTTVYRCGPLID 316

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHVR TG++K   K+ K +  YW G ++   L RIYG ++   + L ++  F EE+
Sbjct: 317 LCRGPHVRHTGKIKTL-KIHKNSSTYWEGKADMETLQRIYGISFPDPKMLKEWEKFQEEA 375

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVL 300
           + RDHRK+ R+ +L+   E   G  F+  KG  I+ TLI ++R +  K  ++E+ TP + 
Sbjct: 376 KNRDHRKIGRDQELYFFHELSPGSCFFLPKGAYIYNTLIEFIRSEYRKRGFQEVVTPNIY 435

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  LW  SGHW  Y  NMF+ +   +       FALKPMNCPGH  +F+H  +S+RELP+
Sbjct: 436 NSRLWMTSGHWQHYSENMFSFEVEKEL------FALKPMNCPGHCLMFDHRPRSWRELPL 489

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+A+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E     + + ++Y  FGF
Sbjct: 490 RIADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAIEQIEDEIKGCLDFLRTVYSIFGF 549

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
               + LSTRPEK +G   +W+ AE  ++  L+      +  +N     G+GAFYGPK +
Sbjct: 550 -SFKLNLSTRPEKYLGDIEVWNQAEKQLENSLNEFGEKWE--LNP----GDGAFYGPKID 602

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIGIMI 539
             +KDAIGR  QC TIQ+DF LP RFN  +V+    +K  PV++HRA+ GS+ER I I+ 
Sbjct: 603 IQIKDAIGRFHQCATIQLDFQLPIRFNLTFVSHDGDDKKRPVIVHRAILGSVERMIAILT 662

Query: 540 ENF---------KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NE 589
           EN+          G +P WLSP Q +V  +  +  EYAQ++          ++ D     
Sbjct: 663 ENYGGKWWFKASSGTMPFWLSPRQVMVVPVGPTCDEYAQKVRQQFHDAKFMVDIDLDPGC 722

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           T+N KIR   + +   I++ G+KE +  ++ IR   +    + ++L+ I  L +
Sbjct: 723 TLNKKIRNAQLAQYNFILVIGEKEKASGTVNIRTRDNKVHGERTILETIERLQQ 776


>gi|116490538|ref|YP_810082.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Oenococcus oeni
           PSU-1]
 gi|116091263|gb|ABJ56417.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Oenococcus oeni
           PSU-1]
          Length = 663

 Score =  426 bits (1095), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 240/650 (36%), Positives = 372/650 (57%), Gaps = 30/650 (4%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           M   IK+T PDG+ K    +    ++AESIS SLAKK+V   I+     +++ +R  G  
Sbjct: 1   MADLIKITMPDGTEKEVEQNTKPIEIAESISPSLAKKSVVAKIDDHFVGMNEGIRFSGKF 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD----KEQPFS 115
            ++T  +  +L V+RHS  H++A+A++ + P++   +G  I +GFYYD D     E+  +
Sbjct: 61  RLVTKGEDEALKVLRHSTTHLLAQALRRLHPKIHFGVGVAIANGFYYDTDDSDESEKQVA 120

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           +DE  +IE +M++++  + P   Q +S ++A ++F   ++ YK+ ++   PA + +T+ +
Sbjct: 121 ADEFPKIEAEMKKLVQANIPIQHQIVSRKEALKIF--AEDPYKIALINDFPADQEITIVK 178

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYG-TAWNTQQELTQY 234
           QG++ DL RG  V STG +K F  L  VAGAYWRG S+  M+ RIYG + WN +  L   
Sbjct: 179 QGDYTDLDRGGLVPSTGWIKHF-ALTSVAGAYWRGMSDNQMMQRIYGLSEWNPEN-LEAQ 236

Query: 235 LYFLEESEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YE 292
              LEE ++RDHR + ++M+LF    E G+G+  W   G  I +T+  Y+  K + + Y 
Sbjct: 237 KKALEERKERDHRTIGKQMELFFTNPEIGAGLPVWLPNGAAIRRTIEDYLVEKERQNGYM 296

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
            + TP V +  L+++SGHWD YR +MF    ADD         L+PMNCP H+ +F H  
Sbjct: 297 NVYTPVVSNLDLYKRSGHWDHYRDDMFPAMTADDG----EQLELRPMNCPSHIEIFEHEP 352

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
           +SYR+LP R+AEFG ++R E SG+L GL RVR  T +D H     EQ+  E   I  LI 
Sbjct: 353 RSYRDLPYRIAEFGQMHRWEKSGALTGLSRVREMTLNDGHTVVAPEQVEPEFKGILQLIR 412

Query: 413 SIYKDFGF--EKIMVKLSTRPEKRV----GSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
            +Y DFGF  +    +LS R  K        DA+W+ A+  +K  +D +       ++  
Sbjct: 413 DVYHDFGFTDQDYRFRLSYRDPKNTKKYYDDDAMWEHAQAALKRAMDDMG------LDYF 466

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
              GE AFYGPK +   K A+G +    TIQ+DF LP RF+  Y     +   PV+IHR 
Sbjct: 467 EAEGEAAFYGPKLDIQFKTALGNEETMSTIQLDFLLPERFDMKYTGEDGKDHRPVLIHRG 526

Query: 527 VFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETD 585
           V G++ERF+  +IE +KG  P WL+P+QA+V  +   A  +YA+ I + L      I+ D
Sbjct: 527 VVGTMERFVAFLIEKYKGQFPTWLAPVQAVVIPVNYGAHGDYARNIYSKLMKDGRRIKLD 586

Query: 586 FRNETINYKIREHSIK-KIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
            R+E + Y IR+  +  K P I++ GD+E  + S+ +R  GS  T+++ +
Sbjct: 587 NRDEKLGYLIRDAQVNLKTPYILVVGDQELRDNSVTVRFRGSDQTKEMKI 636


>gi|328464763|gb|EGF36081.1| threonyl-tRNA synthetase [Lactobacillus helveticus MTCC 5463]
          Length = 644

 Score =  426 bits (1095), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 233/640 (36%), Positives = 365/640 (57%), Gaps = 22/640 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPE 65
           +T PDGS K+F    T +D+A++I+ SL K AVA  +NG++  L   +   S + IIT +
Sbjct: 5   ITLPDGSKKDFEESLTIADLAQNIATSLGKAAVAGKVNGELKPLDYKLDSDSEVAIITNK 64

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L V+R + A +     +  +PE+++      EDGFY D DK+      EL ++EK 
Sbjct: 65  DEEGLDVLRATAAFVFEAVAKCEYPELRLGEHVADEDGFYVDTDKDDQIKVGELPKLEKA 124

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           MQ++I          ++  +  +L+++ K  +K E+L  +   + V  Y+ G++ D C  
Sbjct: 125 MQKVIKNGEKIEHVQIAKSELEDLYKNDK--FKSELLAKVEG-DTVDAYKLGDFVDFCFD 181

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
             + +TG++K+F KL+ VAGAYW G S+ PML RI+GTA+  + +L   L   +E ++RD
Sbjct: 182 ALLPNTGKIKQF-KLLSVAGAYWLGKSSNPMLQRIFGTAFFKEADLRADLKRRQEIKERD 240

Query: 246 HRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQH 303
           HR + R++DLF +  + G+G+ +W  KG  I + +  Y+  R++ D Y+ + TP +++  
Sbjct: 241 HRTIGRDLDLFFVDPKVGAGLPYWMPKGATIRRVVERYIIDREVADGYQHVYTPVLMNLD 300

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
            ++ SGHW  YR +MF        + D     L+PMNCP H+ +F H ++SYR+LP+R+A
Sbjct: 301 AYKTSGHWAHYRDDMFPPM----DMGDGEMLELRPMNCPSHIQIFKHHIRSYRDLPLRVA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           E G ++R E SG+L GL RVR  T +D H F   +Q+  E  KI  LI+ +YKDF     
Sbjct: 357 ELGMMHRYEKSGALSGLQRVREMTLNDGHTFVVLDQVQTEFAKILKLIMEVYKDFDITDY 416

Query: 424 MVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
             +LS R     +K   +D +W+ ++ ++KG +D +     D +      GE AFYGPK 
Sbjct: 417 YFRLSYRDPKNTDKYFANDEMWEKSQKMLKGAMDDL---GLDYVEAE---GEAAFYGPKL 470

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +   K A+G D    TIQ+DF LP RF   YV    E+  PVMIHR + G++ERFI  + 
Sbjct: 471 DIQTKTALGNDETMSTIQLDFMLPDRFGLTYVGKDGEEHRPVMIHRGIVGTMERFIAYLT 530

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           E +KG  P WL+P+QA +  + + A  EYA+++   L      +E D RNE + YKIRE 
Sbjct: 531 EIYKGAFPTWLAPVQAEIIPVNNEAHGEYAEKVRAELAKRGFRVEVDDRNEKMGYKIRES 590

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
             +K+P  ++ GD+E     + +RR+G+      SL D I
Sbjct: 591 QTQKVPYTLVLGDEEMKSGKVNLRRYGTDEEISKSLDDFI 630


>gi|156042356|ref|XP_001587735.1| hypothetical protein SS1G_10975 [Sclerotinia sclerotiorum 1980]
 gi|154695362|gb|EDN95100.1| hypothetical protein SS1G_10975 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 791

 Score =  426 bits (1094), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 251/689 (36%), Positives = 373/689 (54%), Gaps = 63/689 (9%)

Query: 5   IKLTFPDGSIK-NFPVHATGSDVAESISRSLAKKAVAVAING---KVCDLSDPVR-EGSI 59
           I +T  DGSIK       T + +AE IS+SL K+ V   +NG   ++ DL  P+  +  +
Sbjct: 83  ITITLADGSIKEGIAWETTPAQIAEGISKSLLKRTVVAKLNGDSEQLWDLERPLENDCKL 142

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD--FDKEQPFSSD 117
           E++  E+     V  HS AHI+ EA +  +    + IGP I++GFYY+     +   +  
Sbjct: 143 ELLPFENDEGRRVFWHSSAHILGEASERRF-GCSLCIGPPIDNGFYYEMGLPNQGTVTDA 201

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQ 176
           +   +EK + +I+     F +  LS +   E+F+  K  YK  I+ + I    N T+YR 
Sbjct: 202 DWQPLEKLVGQIVKEKQKFERLVLSKDDLLEMFKDNK--YKQHIIKDKIADGTNTTVYRN 259

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           G   DLCRGPHV +TG+++ F  +MK + +Y+ G+ +   L RIYG ++  ++++ ++  
Sbjct: 260 GPLIDLCRGPHVPNTGRIETF-AIMKNSASYFLGNKDNDSLQRIYGVSFPDKKQMAEHKK 318

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEIN 295
           FLEE+ KRDHRKL ++ +LF   E   G   W   G +I+ T+ S++R +  K  Y E+ 
Sbjct: 319 FLEEAAKRDHRKLGKDQELFFFHELSPGSAMWLPHGARIYNTIQSFLREEYWKRGYNEVI 378

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP + +  LW+ SGHW  Y+ +MF      D       FALKPMNCPGH  +F H  +S+
Sbjct: 379 TPNMYNSELWKTSGHWAYYKDDMFTFPVEKDV------FALKPMNCPGHCLMFGHRERSH 432

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP R+A+FG ++RNE SG+L GL RVR F QDDAH+FC ++Q+ +E   + + + +IY
Sbjct: 433 RELPWRVADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCREDQIKDEITGLFDFLRAIY 492

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
              GF    +KLSTRPEK +G    WD AE+ ++  LD    SS   +   +  G+GAFY
Sbjct: 493 GLLGF-TFKLKLSTRPEKFLGKIETWDMAEDKLRSALDEFA-SSDGGVPWELNEGDGAFY 550

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFY------------------------- 510
           GPK +  + D + R+WQC TIQ+DF LP  F   Y                         
Sbjct: 551 GPKIDITICDCLKREWQCATIQLDFQLPQNFGLEYNTGDVPTKKEEAAVKEPVVKPKKDT 610

Query: 511 ----VNSHSEKCH---------PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIV 557
                N   E+ +         PVMIHRA+ GSIERF  I+IE+F G  P WLSP Q +V
Sbjct: 611 EPEDPNVPKERVYKPLTPGCARPVMIHRAMAGSIERFTAILIEHFAGKWPFWLSPRQILV 670

Query: 558 TTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASER 617
             +     EYA+E+ ++     + I+ D    T+  KIR   + +   I + GD E + R
Sbjct: 671 IPVGVGYFEYAKEVQSIFHKQQMFIDVDLSGNTLQKKIRTGQLAQYNFIFVVGDTEMNGR 730

Query: 618 SIGIRRFGSTTTQK----VSLLDAIPILT 642
            + +R    T++Q     VSL +AI  LT
Sbjct: 731 EVNVRNRDDTSSQDRGKPVSLQEAIEKLT 759


>gi|314967879|gb|EFT11978.1| threonyl-tRNA synthetase [Propionibacterium acnes HL037PA1]
          Length = 689

 Score =  426 bits (1094), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 237/644 (36%), Positives = 352/644 (54%), Gaps = 50/644 (7%)

Query: 36  KKAVAVAINGKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           +  VA+ ++G + DL   + +G+ +E +       L +IRHS  H+MA+AVQ ++PEV +
Sbjct: 37  RAVVAMRVDGNLVDLQRELHDGAEVEPVEATSEDGLNIIRHSATHVMAQAVQQLYPEVNL 96

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            IGP I +GFYYDF   +P + + L+++EK+M+ I+  +  F+++  + E ARE  E   
Sbjct: 97  GIGPFITNGFYYDFGNIEPVTPEVLSELEKRMKRIVKENQRFVRRVTTEESARE--ELAD 154

Query: 155 EAYKVEILESIP----------AKENVTLY----RQGE--WFDLCRGPHVRSTGQVKKFF 198
           + YK+E++ +                +T+Y    R GE  W DLCRGPHV ST  +   F
Sbjct: 155 QPYKLELIGTKGKGAEGASVEVGGGELTIYDNVRRNGEVAWKDLCRGPHVPSTKYLANTF 214

Query: 199 KLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI 258
            L K + AYW+GD     L RIYGTAW +++ L  Y   ++E+E+RDHRKL  E+DLF  
Sbjct: 215 ALTKFSAAYWKGDQANDQLQRIYGTAWASREGLAAYQQRIKEAERRDHRKLGAELDLFSF 274

Query: 259 AED-GSGVIFWHRKGWKIFQTLIS--YMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYR 315
            E+ G G++ +H KG  + + LI    + R ++  +  ++TP++    L+  SGH   Y 
Sbjct: 275 PEEIGPGLVVFHPKG-AMLRHLIEEHVIARHMEAGFNFVHTPEITKGGLFHTSGHLPYYA 333

Query: 316 ANMFAVKCAD-------DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV 368
             MF     D       +  +  + + LK MNCP H  +F    +SYRELP+R  E G  
Sbjct: 334 DTMFPPMLVDEERDEEGNVTRAGQEYYLKAMNCPMHNLIFRSRGRSYRELPLRFFEMGHD 393

Query: 369 YRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLS 428
           YR E SG +HGL R+RGF QDD+H +CT+EQ   E  K     +SI  DFG     ++LS
Sbjct: 394 YRYEKSGVVHGLTRMRGFAQDDSHTYCTREQAPGEIKKQIEFFLSILADFGLNDFYLELS 453

Query: 429 TR------PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL----GEGAFYGPK 478
           TR       EK +GSD  W  A +     LD +  S      TG+ L    G  AFYGPK
Sbjct: 454 TRESDSAKKEKFIGSDEDWQVATD----TLDQVCRS------TGLQLVPDPGGAAFYGPK 503

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
               ++DAIGR WQ  TIQ DFN P RF+  Y  +      P+M+H A  GS+ERFIG++
Sbjct: 504 VSVQVRDAIGRTWQMSTIQYDFNQPERFDLEYAAADGTHQRPIMLHSAKLGSVERFIGVL 563

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
            E++ G  P+WLSP+Q  +  +  +  +Y    A +L S  + +ETD  ++    KIR  
Sbjct: 564 TEHYAGAFPVWLSPVQVRLVPVAEAFNDYVTGFAEVLGSRGIRVETDLSSDRFGKKIRNA 623

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           S  K+P I+I G ++A   ++  R    +    V L +A+ I+ 
Sbjct: 624 SKDKVPFILIAGGEDAEAGAVSFRLRDGSQVNGVVLDEAVRIIA 667


>gi|114659235|ref|XP_001144545.1| PREDICTED: probable threonyl-tRNA synthetase 2, cytoplasmic isoform
           2 [Pan troglodytes]
          Length = 802

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 236/607 (38%), Positives = 351/607 (57%), Gaps = 22/607 (3%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAH 79
            T   VA  IS+ LA+  V   +NG++ DL  P+  + S+E++T ++  + AV  HS AH
Sbjct: 179 TTPYQVAAEISQELAESTVIAKVNGELWDLDRPLEGDSSLELLTFDNEEAQAVYWHSSAH 238

Query: 80  IMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQIEKKMQEIIARDSPFLK 138
           I+ EA++ ++    +  G  IE+GFYYD F +++  SS EL+ +E   + II    PF +
Sbjct: 239 ILGEAME-LYYGGHLCYGLPIENGFYYDVFIEDRAVSSTELSALENICKAIIKEKQPFER 297

Query: 139 QYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFF 198
             +S E   E+F+  K  +K  IL         T+YR G   DLC+GPHVR TG++K   
Sbjct: 298 LEVSKEILLEMFKYNK--FKCRILNEKVNTATTTVYRCGPLIDLCKGPHVRHTGKIKTI- 354

Query: 199 KLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI 258
           K+ K +  YW G+     L RIYG ++   + +  +  F EE++ RDHRK+ +E +LF  
Sbjct: 355 KIFKNSSTYWEGNPEMETLQRIYGISFPDNKMMRDWEKFQEEAKNRDHRKIGKEQELFFF 414

Query: 259 AEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRAN 317
            +   G  F+  +G  I+ TL  ++R +  K D+ E+ +P + +  LW+ SGHW  Y  N
Sbjct: 415 HDLSPGSCFFLPRGAFIYNTLTDFIREEYHKRDFTEVLSPNMYNSKLWEASGHWQHYSEN 474

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           MF  +   DT      FALKPMNCPGH  +F H  +S+RE+P+R A+FG ++RNE SG+L
Sbjct: 475 MFTFEIEKDT------FALKPMNCPGHCLMFAHRPRSWREMPIRFADFGVLHRNELSGTL 528

Query: 378 HGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGS 437
            GL RVR F QDDAH+FCT EQ+  E       + S+Y  FGF    + LSTRPE  +G 
Sbjct: 529 SGLTRVRRFQQDDAHIFCTVEQIEEEIKGCLRFLQSVYSTFGF-SFQLNLSTRPENFLGE 587

Query: 438 DALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ 497
             +W++AE  ++  L  +      ++N     G+GAFYGPK +  +KDAIGR  QC TIQ
Sbjct: 588 IEMWNEAEKQLQNSL--MDFGEPWKMNP----GDGAFYGPKIDIKIKDAIGRYHQCATIQ 641

Query: 498 VDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI 556
           +DF LP RFN  YV+    +K  PV+IHRA+ GS+ER I I+ EN+ G  P WLSP Q +
Sbjct: 642 LDFQLPIRFNLTYVSKDGDDKKRPVIIHRAILGSVERMIAILSENYGGKWPFWLSPRQVM 701

Query: 557 VTTITSSAVEYAQEIANLLKSHHLSIETDF-RNETINYKIREHSIKKIPIIIICGDKEAS 615
           V  +  +  +YA ++++         + D   N T+N KIR   + +   I++ G+KE  
Sbjct: 702 VIPVGPTCEKYALQVSSEFFEEGFMADVDLDHNCTLNKKIRNAQLAQYNFILVVGEKEKI 761

Query: 616 ERSIGIR 622
           + ++ +R
Sbjct: 762 DNAVNVR 768


>gi|196012975|ref|XP_002116349.1| hypothetical protein TRIADDRAFT_50865 [Trichoplax adhaerens]
 gi|190580940|gb|EDV21019.1| hypothetical protein TRIADDRAFT_50865 [Trichoplax adhaerens]
          Length = 680

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 238/639 (37%), Positives = 359/639 (56%), Gaps = 28/639 (4%)

Query: 5   IKLTFPDGSIKNFPVHATGS-DVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEII 62
           IK+T PDG +       T S  VA SIS+ LA   V   +NG + DL + + E  ++E++
Sbjct: 42  IKITLPDGKVVEGESWKTTSYKVAASISQGLADNCVVAKVNGVIKDLDEALTEDCTLELL 101

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQ 121
             ++  +  V  HS AHI+ EA++  +    +  GP I +GFYYD F ++   S ++  +
Sbjct: 102 KFDNEEAQKVYWHSSAHILGEAMERYFGGC-LCYGPPIAEGFYYDMFIEKNQVSGNDFEK 160

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           ++  ++ I+    PF+K  +  E   E+F+  K  +KV ILE        T+YR G   D
Sbjct: 161 LDTIVKAILKDKQPFVKLEMKKEDLLEMFKYNK--FKVRILEERVKTPTTTVYRCGPLID 218

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHVR TG++K    L K + +YW G+     L R+YG ++   +++ ++  F EE+
Sbjct: 219 LCRGPHVRHTGKIKAM-TLTKNSSSYWEGNCEAESLQRVYGISFPDSKQMKEWKKFQEEA 277

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVL 300
            KRDHRK+ R+ +LF  +E   G  F+  +G  I+  L+  MR +  K  + E+ +P + 
Sbjct: 278 AKRDHRKIGRDQELFFFSELSPGSCFFLPRGAHIYGILMQLMRDQYRKRGFHEVLSPNIY 337

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
              LW  SGHW  Y+ +MF      D       F LKPMNCPGH  +F+H  +S+RELP+
Sbjct: 338 SSKLWMTSGHWQHYKDDMFTFDVEKDQ------FGLKPMNCPGHCVMFSHRPRSWRELPL 391

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R AEFG ++RNE SG+L GL RVR F QDDAH+FC  +Q+ +E     + +  IY   GF
Sbjct: 392 RYAEFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCRDDQVKDEIKGCLDFLKYIYDTLGF 451

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           + + + LSTRP++ +G  A WD AE  ++  LD         +  G+   +GAFYGPK +
Sbjct: 452 Q-LKLFLSTRPDEFMGEIATWDRAEQQLRESLDEFG------LKWGLKEKDGAFYGPKID 504

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC-HPVMIHRAVFGSIERFIGIMI 539
             + DA+ R  QC TIQ+DF LP+RFN  YV  + +    PV+IHRA+ GS+ER I ++ 
Sbjct: 505 IQVLDALRRPHQCATIQLDFQLPTRFNLTYVGKNGDDTLRPVIIHRAILGSVERMIAVLC 564

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIREH 598
           ENF G  P WLSP QA+V  + +   EYA ++ + L S    ++ D    +T+N K+R  
Sbjct: 565 ENFAGKWPFWLSPRQAMVIPVAAKFDEYALQVRDQLHSAGFYVDVDLAPGDTMNKKVRNA 624

Query: 599 SIKKIPIIIICGDKEASERSIGIRR-----FGSTTTQKV 632
            + +    ++ G KE   +S+ +R      +G  T  KV
Sbjct: 625 QLAQYNFSMVVGQKECENKSVNVRSRNNQVYGEQTIVKV 663


>gi|197301753|ref|ZP_03166823.1| hypothetical protein RUMLAC_00479 [Ruminococcus lactaris ATCC
           29176]
 gi|197299193|gb|EDY33723.1| hypothetical protein RUMLAC_00479 [Ruminococcus lactaris ATCC
           29176]
          Length = 655

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 244/673 (36%), Positives = 379/673 (56%), Gaps = 44/673 (6%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K+T  DGS+K +    +  D+A  IS  LA+ A A  +NG++ DL   +  +  + I+T
Sbjct: 1   MKITLKDGSVKEYSEAKSVYDIAADISSGLARVACAGEVNGEIVDLRTVIDSDCELNIVT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
             DP  L VIRH+ +H++A+AV+ ++P+ ++AIGP IEDGFYYDF+ E PFS + L ++E
Sbjct: 61  ASDPEGLKVIRHTASHVLAQAVKRLFPDAKIAIGPAIEDGFYYDFEAE-PFSRETLDKLE 119

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M++II       +  L  E+A +  + K E +KVE++E +P  E ++ Y QGE+ DLC
Sbjct: 120 AEMKKIIKEGHELKRYTLPREEAIKFMQEKNEPFKVELIEDLPEGEEISFYDQGEFVDLC 179

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+ +T  +K F KL   + AYWRGDS++  L RIYGTA+N ++EL  YL  LE++++
Sbjct: 180 AGPHLMTTKGIKAF-KLTSSSMAYWRGDSDKARLQRIYGTAFNKKEELNAYLEKLEDAKR 238

Query: 244 RDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD------DYEEINT 296
           RDH KL REM+LF   +  G G+  +  KG K    +I  ++R I+D       Y    T
Sbjct: 239 RDHNKLGREMELFTTVDVIGQGLPLFPPKGTK----MIMKLQRWIEDLEDKEWGYVRTRT 294

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +    L++ SGHWD Y+  MF +    D  KD   FAL+PM CP    V+ +  KSYR
Sbjct: 295 PLMAKSDLYKISGHWDHYKEGMFVL---GDEEKDKEVFALRPMTCPFQYYVYKNTQKSYR 351

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +LP R++E  +++R+E SG +HGL RVR FT  +AH     +Q   E     +L   +  
Sbjct: 352 DLPYRMSETSTLFRSEDSGEMHGLTRVRQFTITEAHNVIRPDQAEEELKNCFDLAYYVLS 411

Query: 417 DFGFEK-IMVKLS----TRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL-- 469
             G +  +  +LS       +K +G +  W+  +  ++ VL             GV    
Sbjct: 412 TLGLQDDVTYRLSKWDPANKKKYLGDEDYWNRTQEALREVLR----------EKGVPFVE 461

Query: 470 --GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAV 527
             GE AFYGPK +   K+  G++    TIQ+D  +   F+ +Y++ + +K  P +IHR  
Sbjct: 462 ADGEAAFYGPKIDIQAKNVYGKEDTMITIQLDCAIAENFDLYYIDQNGDKVRPYIIHRTS 521

Query: 528 FGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR 587
            G  ER +  +IE + G  P WL P Q  V  I+    EYA ++   LK + + +  D R
Sbjct: 522 MGCYERTLAWLIEKYAGKFPTWLCPEQVRVLPISEKYEEYANKVCAELKKNDIDVTVDNR 581

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIR-RF-GSTTTQKVS-LLDAI--PILT 642
           +E I +KIRE  + K+P +++ G +E ++ ++ +R RF G+  T+ +   +DAI   I T
Sbjct: 582 SEKIGFKIREARLDKLPYMLVVGQQEEADGTVSVRSRFAGNEGTKSLDEFIDAICKEIRT 641

Query: 643 KE---SLPPDCQK 652
           KE    LP + +K
Sbjct: 642 KEIRKELPEEEKK 654


>gi|73919796|sp|Q5UX65|SYT_HALMA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
          Length = 642

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 234/624 (37%), Positives = 360/624 (57%), Gaps = 23/624 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           S + +T PDG+       +T  DVA  I   L    VA  ++G++ D   P+  +  +EI
Sbjct: 2   STVTVTLPDGTPLEVERGSTVEDVAYEIGPGLGDDTVAGVVDGELVDKHAPLTADVELEI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +T      L V+RHS AH+ A+A+Q ++ + ++ IGP  ++GFYYD         D+L  
Sbjct: 62  VTESSDEYLDVLRHSAAHVFAQALQRLYSDAKLTIGPWTDNGFYYDI-TGVDIDEDDLEA 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-ENVTLYRQGEWF 180
           IE + +EII  D    ++ +  + A E +E  +  +K +ILE+  A  E V+ Y QGE+ 
Sbjct: 121 IEAEAEEIIEEDLDIERELVDRDDAFERYEDNQ--FKQDILETEAADDEEVSFYTQGEFE 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLC+GPHV STG++  F  L++++ A+WRG+     L+R+YGTA+ T+  L ++L    +
Sbjct: 179 DLCQGPHVESTGEIGGF-ALLEISAAFWRGEEENETLTRVYGTAFPTEDALDEFLEQRRK 237

Query: 241 SEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           +E+RDHRK+ +EMDLF I E  G G+  +   G KI   L  Y+    +D  Y+E+ TP 
Sbjct: 238 AEERDHRKIGQEMDLFSIDETTGPGLPLYEPNGKKILNELSDYVAGLNRDAGYDEVETPH 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    LW++SGH+++Y  +MF +   D+       + LKPMNCPGH  +F     SYR+L
Sbjct: 298 VFRTELWKKSGHYENYVDDMFLLDVNDEE------YGLKPMNCPGHATIFEQNSWSYRDL 351

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           PVR  E G VYR E  G L GL R   FT DD H+F   +Q+  E L   ++I+     F
Sbjct: 352 PVRYFEDGKVYRKEQRGELSGLSRTWAFTIDDGHLFVRPDQIEEEVLATVDIILDTLDTF 411

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
             +   V+ +TRPEK VG D +W+ AE+ ++ VL+      QD I+  V  G+GAFYGPK
Sbjct: 412 NLD-YTVQFATRPEKSVGGDEIWEKAESQLESVLE-----EQD-IDYVVEEGDGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++  +DA+GR W   T+Q+DFN+P RF+  Y    +E+  PVMIHRA++GS ERF  ++
Sbjct: 465 IDFAFEDALGRHWDGPTVQLDFNMPERFDLSYTGEDNEEHRPVMIHRALYGSYERFFMVL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
            E++ G  P WL+P Q  +  ++   + Y +EI + L    ++IE   R+ T+  KI++ 
Sbjct: 525 TEHYNGKFPPWLAPEQIRLLPVSDDNITYCEEIQDELDDFRVTIED--RSWTVGKKIQQA 582

Query: 599 SIKKIPIIIICGDKEASERSIGIR 622
              ++P + + GD E    +I +R
Sbjct: 583 HDDRVPYMCVIGDNEEEAGTISVR 606


>gi|19113156|ref|NP_596364.1| cytoplasmic threonine-tRNA ligase Trs1 (predicted)
           [Schizosaccharomyces pombe 972h-]
 gi|3183175|sp|P87144|SYTC_SCHPO RecName: Full=Threonyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|2104451|emb|CAB08788.1| cytoplasmic threonine-tRNA ligase Trs1 (predicted)
           [Schizosaccharomyces pombe]
          Length = 703

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 236/637 (37%), Positives = 364/637 (57%), Gaps = 35/637 (5%)

Query: 4   DIKLTFPDGS-IKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           +I +T PDG  IK      T   +A SIS+ LA +     +NG+  DL+ P+    ++++
Sbjct: 48  EIDITLPDGKVIKGTSWETTPISIAASISKGLADRVTVAIVNGEPWDLTRPLEASCTLKL 107

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF--DKEQPFSSDEL 119
               DP    V  HS AHI+ EA +  +    + IGP  ++GF+Y+   D  +  ++D+ 
Sbjct: 108 CDFNDPEGKRVFWHSSAHILGEATELSF-HCHLCIGPPTDEGFFYEMGIDNGRVITNDDY 166

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES-IPAKENVTLYRQGE 178
           + IE   ++ I +  PF +  +S E   E+F   K  YK  I+++ IP   + T+YR G 
Sbjct: 167 SSIESYAKQAIKQKQPFERLVISKEGLLEMFRYNK--YKQYIIQTKIPDGASTTVYRCGP 224

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLC GPHV  TG++K F  + K + +Y+ GD+    L R+YG ++   +++ +Y  FL
Sbjct: 225 LIDLCTGPHVPHTGRIKSF-AVTKNSSSYFLGDAKNDSLQRVYGISFPDNKQMQEYKTFL 283

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
            E+ KRDHRK+ R+ +LF   E   G  F+   G +I+ TL+ YMR +  K  Y+E+ TP
Sbjct: 284 AEAAKRDHRKIGRDQELFFFNEISPGSCFFLPHGARIYNTLLKYMRYQYSKRGYQEVITP 343

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + + +LW+ SGHW++Y  NMF+     +       +ALKPMNCPGH  +F    +SYR+
Sbjct: 344 NMYNVNLWKTSGHWNNYSENMFSFDIEKEK------YALKPMNCPGHCVMFKSRDRSYRD 397

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP R+A+FG ++RNE SG+L GL RVR F QDDAH+FCT +Q+ +E     + +  +Y  
Sbjct: 398 LPWRVADFGVLHRNEFSGALSGLTRVRRFQQDDAHIFCTPDQVRSEIEGCFDFLKEVYGT 457

Query: 418 FGFEKIMVKLSTRP-EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           FGF    ++LSTRP EK +G  A WD AE  +K  LD   +  +  +N     G+GAFYG
Sbjct: 458 FGF-TFHLELSTRPEEKYLGDLATWDKAEAQLKAALDA--SGYKWELNA----GDGAFYG 510

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFN-AFYVNSHSEKC----------HPVMIHR 525
           PK +  + DA+ R  QC TIQ+DF LP RF   F+  + +E+            PVM+HR
Sbjct: 511 PKIDITVFDALKRQHQCATIQLDFQLPERFQLEFHAPASAEEAKESGNNNKYTRPVMVHR 570

Query: 526 AVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD 585
           A+ GS+ER I I+ E++ G  P W+SP Q  +  ++++A  YA ++ N+L    + ++TD
Sbjct: 571 AILGSLERMIAILTEHYAGKWPFWMSPRQVCIIPVSAAAYNYADKVHNILSEADIFVDTD 630

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
             + T+  KIR   + +   I + G +E S  S+ +R
Sbjct: 631 KSDNTLPKKIRNAQLAQYNFIFVVGAEEESTNSVNVR 667


>gi|224475774|ref|YP_002633380.1| threonyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus
           TM300]
 gi|222420381|emb|CAL27195.1| threonyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus
           TM300]
          Length = 635

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 230/647 (35%), Positives = 377/647 (58%), Gaps = 23/647 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M + + +T PD          T   VA+ I  S AKKA   +I+G++ DL+  + ++  +
Sbjct: 1   MGNQVIVTLPDQRKLEVEQSTTLYQVAQQIGSSFAKKAAVASIDGELHDLNHQIEKDCQV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           E  T ED   LA IR++ ++++ EA  ++   V+VA   + ++ FY DF  E    + +L
Sbjct: 61  EFFTYEDEEGLAAIRYTLSYLVGEA--AVKYGVEVADFGVNKEQFYCDFKAENTLKAADL 118

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            ++ K + + I+ + P      S   A +LF  K   +    +E    +E V +   G++
Sbjct: 119 KEVTKTINKAISANHPIEVHEYSKLDALDLF--KDNPFMQHHIEQ--GEEPVKVAVHGDY 174

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
             +   P V +  +VK + KL  ++   W  D N   L RI G A+   + L ++  F+E
Sbjct: 175 KAVIHQPLVTNLSKVKNY-KLQSISATNWLRDVNNESLQRIAGFAFADAKALEEHQAFIE 233

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           + E+ +HR+L +E+D+F  +E   G+ F+   G  I   L + +R+ + + DYEE+ TP 
Sbjct: 234 KYEQVNHRRLGKELDIFSFSEYAPGMPFYAHNGQVIRLELQNMLRQLQFEADYEEVYTPF 293

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D+ LW+ SGHWD Y+ NM+  +       D +T+ALKPMNCPGH+ ++ + L SYR+L
Sbjct: 294 IMDETLWKNSGHWDHYQDNMYFTEV------DEQTYALKPMNCPGHMLIYKNHLHSYRDL 347

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG V+R+E SGSL+GL RVR F QDDAH+F  ++Q+ +E L +  LI  +Y  F
Sbjct: 348 PIRMAEFGQVHRHELSGSLNGLFRVRTFNQDDAHIFVRRDQIESEILDVLGLIHKVYSVF 407

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+   ++LSTRP+  +G   LWD AE  ++ +L+      Q      V   +GAFYGPK
Sbjct: 408 GFD-YSIELSTRPDDFMGEIELWDFAEQSLENMLN------QHGFKYTVNEKDGAFYGPK 460

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +  +KDA+GR  QCGT+Q+DF +P +F+  ++N   EK  PV+IHRA++GS +RFIGI+
Sbjct: 461 IDIHIKDALGRSHQCGTVQLDFQMPEKFDLTFINQAGEKERPVVIHRAIYGSSDRFIGIL 520

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +E+F GNLPLWL+P+Q  V  + +   ++  +++   LK     +E D  +E + YKIR+
Sbjct: 521 LEHFGGNLPLWLAPVQMEVILVNADLHLDAVKDLKRRLKKEGFRVELDLSDEKMGYKIRQ 580

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
             +KK+P  ++ GD E    ++ +R+ G +    +++ D +  L +E
Sbjct: 581 AHLKKVPYTLVVGDNEVENGTVAVRKRGESEEHSINVEDFVKQLKEE 627


>gi|55379994|ref|YP_137844.1| threonyl-tRNA synthetase [Haloarcula marismortui ATCC 43049]
 gi|55232719|gb|AAV48138.1| threonyl-tRNA synthetase [Haloarcula marismortui ATCC 43049]
          Length = 672

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 234/624 (37%), Positives = 360/624 (57%), Gaps = 23/624 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           S + +T PDG+       +T  DVA  I   L    VA  ++G++ D   P+  +  +EI
Sbjct: 32  STVTVTLPDGTPLEVERGSTVEDVAYEIGPGLGDDTVAGVVDGELVDKHAPLTADVELEI 91

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +T      L V+RHS AH+ A+A+Q ++ + ++ IGP  ++GFYYD         D+L  
Sbjct: 92  VTESSDEYLDVLRHSAAHVFAQALQRLYSDAKLTIGPWTDNGFYYDITGVD-IDEDDLEA 150

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-ENVTLYRQGEWF 180
           IE + +EII  D    ++ +  + A E +E  +  +K +ILE+  A  E V+ Y QGE+ 
Sbjct: 151 IEAEAEEIIEEDLDIERELVDRDDAFERYEDNQ--FKQDILETEAADDEEVSFYTQGEFE 208

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLC+GPHV STG++  F  L++++ A+WRG+     L+R+YGTA+ T+  L ++L    +
Sbjct: 209 DLCQGPHVESTGEIGGF-ALLEISAAFWRGEEENETLTRVYGTAFPTEDALDEFLEQRRK 267

Query: 241 SEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           +E+RDHRK+ +EMDLF I E  G G+  +   G KI   L  Y+    +D  Y+E+ TP 
Sbjct: 268 AEERDHRKIGQEMDLFSIDETTGPGLPLYEPNGKKILNELSDYVAGLNRDAGYDEVETPH 327

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    LW++SGH+++Y  +MF +   D+       + LKPMNCPGH  +F     SYR+L
Sbjct: 328 VFRTELWKKSGHYENYVDDMFLLDVNDEE------YGLKPMNCPGHATIFEQNSWSYRDL 381

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           PVR  E G VYR E  G L GL R   FT DD H+F   +Q+  E L   ++I+     F
Sbjct: 382 PVRYFEDGKVYRKEQRGELSGLSRTWAFTIDDGHLFVRPDQIEEEVLATVDIILDTLDTF 441

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
             +   V+ +TRPEK VG D +W+ AE+ ++ VL+      QD I+  V  G+GAFYGPK
Sbjct: 442 NLD-YTVQFATRPEKSVGGDEIWEKAESQLESVLE-----EQD-IDYVVEEGDGAFYGPK 494

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++  +DA+GR W   T+Q+DFN+P RF+  Y    +E+  PVMIHRA++GS ERF  ++
Sbjct: 495 IDFAFEDALGRHWDGPTVQLDFNMPERFDLSYTGEDNEEHRPVMIHRALYGSYERFFMVL 554

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
            E++ G  P WL+P Q  +  ++   + Y +EI + L    ++IE   R+ T+  KI++ 
Sbjct: 555 TEHYNGKFPPWLAPEQIRLLPVSDDNITYCEEIQDELDDFRVTIED--RSWTVGKKIQQA 612

Query: 599 SIKKIPIIIICGDKEASERSIGIR 622
              ++P + + GD E    +I +R
Sbjct: 613 HDDRVPYMCVIGDNEEEAGTISVR 636


>gi|296089916|emb|CBI39735.3| unnamed protein product [Vitis vinifera]
          Length = 686

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 228/625 (36%), Positives = 365/625 (58%), Gaps = 24/625 (3%)

Query: 5   IKLTFPDGSIKNFPV-HATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           IK+T PDG++K       T  D+A+ IS+ LA  A+   +NG + D+S  +  +  +++ 
Sbjct: 52  IKITLPDGTVKEGKKWETTPFDIAKEISKGLASNALISQVNGVLWDMSRALEGDCGLKLF 111

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE--DGFYYD-FDKEQPFSSDEL 119
           T +         HS AHI+ +A++  +   ++ IGP     +GFYYD F  E   + D  
Sbjct: 112 TFDSDEGRDTFWHSSAHILGQALEMEYG-CKLCIGPCTTRGEGFYYDAFYGELGLNEDHF 170

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            QIE  + + +    PF +  +S  +A E+F   + ++K+EI+  +P  + +T+YR G  
Sbjct: 171 KQIESGVLKAVGEKQPFERIEVSRNQALEMF--SENSFKIEIINDLPEDKTITVYRCGPL 228

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPH+ +T  VK F   +K + AYWRG+ +R  L R+YG ++   + L +Y+  +E
Sbjct: 229 VDLCRGPHIPNTSFVKAF-ACLKASSAYWRGNRDRESLQRVYGISYPDSKRLKEYIARIE 287

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E++K DHR L  + +LF       G  F+   G +I+  L+ +++ + ++  Y E+ +P 
Sbjct: 288 EAKKYDHRLLGVKQELFFCHPLSPGSWFFLPHGGRIYNKLMEFIKAQYRERGYHEVFSPT 347

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           + +  LW+ SGH  +Y+ NMF  +       + + F LKPMNCPGH  +F H ++SYREL
Sbjct: 348 MYNMQLWETSGHAANYKENMFVFEV------EKQEFGLKPMNCPGHCLMFEHRVRSYREL 401

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLA+FG ++RNE SG+L GL RVR F QDDAH+FC + Q+ +E + + + I   Y  F
Sbjct: 402 PLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVMGVLDFINYAYNIF 461

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF    +KLSTRPEK +G    W+ AE  +   L+  ++     IN     G+GAFYGPK
Sbjct: 462 GF-TYELKLSTRPEKYLGDLETWEKAEAALTEALN--QSGKPWEINE----GDGAFYGPK 514

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFY-VNSHSEKCHPVMIHRAVFGSIERFIGI 537
            +  + DA+ R +QC T+Q+DF LPSRF+  Y     +++  PVMIHRA+ GS+ER   I
Sbjct: 515 IDISVSDALNRKFQCATLQLDFQLPSRFDLSYSAEDEAKRERPVMIHRAILGSVERMFAI 574

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           ++E++KG  P WLSP QAIV  ++  +  YA ++ + +      ++ D  +  I  K+RE
Sbjct: 575 LLEHYKGKWPFWLSPRQAIVCPVSEKSQPYALQVRDQIHQAGYYVDVDTTDRKIQKKVRE 634

Query: 598 HSIKKIPIIIICGDKEASERSIGIR 622
             + +   I++ G++EA+ R + +R
Sbjct: 635 AQLAQYNFILVVGEEEANTRQVSVR 659


>gi|225461914|ref|XP_002265484.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 745

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 228/625 (36%), Positives = 365/625 (58%), Gaps = 24/625 (3%)

Query: 5   IKLTFPDGSIKNFPV-HATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           IK+T PDG++K       T  D+A+ IS+ LA  A+   +NG + D+S  +  +  +++ 
Sbjct: 111 IKITLPDGTVKEGKKWETTPFDIAKEISKGLASNALISQVNGVLWDMSRALEGDCGLKLF 170

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE--DGFYYD-FDKEQPFSSDEL 119
           T +         HS AHI+ +A++  +   ++ IGP     +GFYYD F  E   + D  
Sbjct: 171 TFDSDEGRDTFWHSSAHILGQALEMEY-GCKLCIGPCTTRGEGFYYDAFYGELGLNEDHF 229

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            QIE  + + +    PF +  +S  +A E+F   + ++K+EI+  +P  + +T+YR G  
Sbjct: 230 KQIESGVLKAVGEKQPFERIEVSRNQALEMF--SENSFKIEIINDLPEDKTITVYRCGPL 287

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPH+ +T  VK F   +K + AYWRG+ +R  L R+YG ++   + L +Y+  +E
Sbjct: 288 VDLCRGPHIPNTSFVKAF-ACLKASSAYWRGNRDRESLQRVYGISYPDSKRLKEYIARIE 346

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E++K DHR L  + +LF       G  F+   G +I+  L+ +++ + ++  Y E+ +P 
Sbjct: 347 EAKKYDHRLLGVKQELFFCHPLSPGSWFFLPHGGRIYNKLMEFIKAQYRERGYHEVFSPT 406

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           + +  LW+ SGH  +Y+ NMF  +       + + F LKPMNCPGH  +F H ++SYREL
Sbjct: 407 MYNMQLWETSGHAANYKENMFVFEV------EKQEFGLKPMNCPGHCLMFEHRVRSYREL 460

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLA+FG ++RNE SG+L GL RVR F QDDAH+FC + Q+ +E + + + I   Y  F
Sbjct: 461 PLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVMGVLDFINYAYNIF 520

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF    +KLSTRPEK +G    W+ AE  +   L+  ++     IN     G+GAFYGPK
Sbjct: 521 GF-TYELKLSTRPEKYLGDLETWEKAEAALTEALN--QSGKPWEINE----GDGAFYGPK 573

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFY-VNSHSEKCHPVMIHRAVFGSIERFIGI 537
            +  + DA+ R +QC T+Q+DF LPSRF+  Y     +++  PVMIHRA+ GS+ER   I
Sbjct: 574 IDISVSDALNRKFQCATLQLDFQLPSRFDLSYSAEDEAKRERPVMIHRAILGSVERMFAI 633

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           ++E++KG  P WLSP QAIV  ++  +  YA ++ + +      ++ D  +  I  K+RE
Sbjct: 634 LLEHYKGKWPFWLSPRQAIVCPVSEKSQPYALQVRDQIHQAGYYVDVDTTDRKIQKKVRE 693

Query: 598 HSIKKIPIIIICGDKEASERSIGIR 622
             + +   I++ G++EA+ R + +R
Sbjct: 694 AQLAQYNFILVVGEEEANTRQVSVR 718


>gi|34482934|emb|CAE09933.1| THREONYL-TRNA SYNTHETASE [Wolinella succinogenes]
          Length = 536

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 218/525 (41%), Positives = 325/525 (61%), Gaps = 19/525 (3%)

Query: 100 IEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKV 159
           +++GFYYDF  E     ++LA IEKKM+EI    S   +  LS E+A   F   K+  K 
Sbjct: 1   MQEGFYYDFRVESKIGEEDLAIIEKKMKEIAKNGSDIERYTLSREEAIAKF--AKDDLKQ 58

Query: 160 EILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSR 219
            ++  IP + ++++YRQGE+ DLCRGPH+ ST ++   FKL K+AGAY  GD    ML+R
Sbjct: 59  AVISRIP-EGDLSIYRQGEFEDLCRGPHLPST-KLLHAFKLTKLAGAYLGGDEKSEMLTR 116

Query: 220 IYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQT 278
           IYG A+  ++ L  YL+ +EE++KRDHRK+  EM LF   ED G+G+  W   G ++ + 
Sbjct: 117 IYGIAFADKESLNAYLHQMEEAKKRDHRKVGTEMGLFIFDEDVGAGLPIWLPAGARLRRR 176

Query: 279 LISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALK 337
           L + +    I+ +YE +  P++L   LW+ SGH+ +Y+ NM+  K       D   + +K
Sbjct: 177 LEAMLTEAHIRRNYEPVRGPEILKSDLWKISGHYQNYKENMYFTKI------DEVEYGIK 230

Query: 338 PMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK 397
           PMNC GH+ V+  G++SYRELP+R  E+G V+R+E SG LHGL+RVR FTQDDAH+FC  
Sbjct: 231 PMNCVGHIKVYGSGVRSYRELPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDAHIFCRP 290

Query: 398 EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKN 457
           EQ+ +E + I + +  I   FGF   M ++STRPEK +G +A+W+     +K  L+    
Sbjct: 291 EQIKDEVVDIVHFVDKIMSAFGFNYEM-EISTRPEKSIGDEAIWEKGTQALKEALEA--- 346

Query: 458 SSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK 517
                +  G+  G GAFYGPK +  + DAIGR WQCGT+Q+D NLP RF   Y + ++  
Sbjct: 347 ---QGLQYGIDEGGGAFYGPKIDIKITDAIGRKWQCGTVQIDMNLPERFELAYTDENNTP 403

Query: 518 CHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKS 577
             PVMIHRA+ GS ERF+ I+ E+F G  P +++P    +  I    +EYA+ +   L+ 
Sbjct: 404 QRPVMIHRAILGSFERFVAILTEHFGGEFPFFIAPTPVAIVPIGEEQLEYAKHLRLELQK 463

Query: 578 HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
             +  E   +NET+N KIR    +++P+I++ G++E +E+ + IR
Sbjct: 464 VGVYAEIHDKNETLNKKIRTVEKQRVPMIVVLGEREVNEKKVAIR 508


>gi|160935092|ref|ZP_02082478.1| hypothetical protein CLOLEP_03968 [Clostridium leptum DSM 753]
 gi|156866545|gb|EDO59917.1| hypothetical protein CLOLEP_03968 [Clostridium leptum DSM 753]
          Length = 660

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 236/634 (37%), Positives = 363/634 (57%), Gaps = 33/634 (5%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           +K+T   G++K +  + T +++A+S+   L K A A  +NG+V DL  PV E S +E++T
Sbjct: 16  VKVTLKGGAVKEYDDNVTVAEIAKSLGGGLYKAACAGKLNGRVVDLRTPVTEDSEVELLT 75

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +         H+ +HIMA+AV  ++P+   AIGP I+ GFYYDFD  +  + D+L  IE
Sbjct: 76  FDSQEGKRAYWHTTSHIMAQAVGRLFPDAVFAIGPSIDQGFYYDFDLPRNLTPDDLTAIE 135

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-ENVTLYRQGEWFDL 182
            +M++II  D P  +  L  E+A +L + K + YKVE+++    K E ++ YRQG++ DL
Sbjct: 136 SEMKKIIKEDEPLERFELEPEEAVKLMKEKGQPYKVELIQEHSGKGEKISFYRQGDFVDL 195

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPH+ STG+VK   KL    GAYWRGDS   ML R+YG ++    ELT +L  +EE++
Sbjct: 196 CAGPHLMSTGKVKAV-KLTSCTGAYWRGDSKSKMLQRVYGISFPKASELTAHLEAMEEAK 254

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKDDYEE-----INT 296
           KRDH KL RE+  F   +  G G+      G ++ Q L    +R ++D+ ++       T
Sbjct: 255 KRDHNKLGRELGYFTTCDIIGQGLPILLPNGARVIQLL----QRFVEDEEQKRGWLLTKT 310

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +    L++ SGHWD Y+  MF +    D  KD   FAL+PM CP     + +  +SYR
Sbjct: 311 PYMAKSDLYKLSGHWDHYKDGMFVL---GDEEKDDEVFALRPMTCPFQYQAYLNKKRSYR 367

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM---FNECLKIHNLIIS 413
           +LP+R  E  +++RNE SG +HGL+RVR FT  + H+ C  +Q+   F  CL++ N ++ 
Sbjct: 368 DLPLRYNETSTLFRNEASGEMHGLIRVRQFTISEGHLMCRPDQLEEEFKSCLQLANYMLE 427

Query: 414 IYKDFGF-EKIMVKLST-RPE---KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
                G  E +  + S   PE   K +G+   WD+A++ MK +LD +       I   + 
Sbjct: 428 T---LGLAEDVSYRFSQWDPEDKDKYIGTPEQWDEAQSAMKRILDHLG------IEYAIG 478

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
           +GE AFYGPK +  +K+  G++    TIQ+D  L  +F   YV++  +  +P +IHR   
Sbjct: 479 VGEAAFYGPKLDIQIKNVFGKEDTLITIQIDQLLAEKFGMEYVDADGKAKNPYIIHRTSI 538

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRN 588
           G  ER + ++IE + G LP+WL P Q  V  I+   ++ A E+   LK+  +    D RN
Sbjct: 539 GCYERTLALLIEKYAGALPMWLMPEQVRVLPISEKFLDKALEVDRELKAQGIRSTADSRN 598

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           E I YKIRE  ++KIP ++I G+KE  E  + +R
Sbjct: 599 EKIGYKIREAQMEKIPYMLIIGEKEVQENVVSVR 632


>gi|118586378|ref|ZP_01543828.1| threonyl-tRNA synthetase 1 [Oenococcus oeni ATCC BAA-1163]
 gi|118433195|gb|EAV39911.1| threonyl-tRNA synthetase 1 [Oenococcus oeni ATCC BAA-1163]
          Length = 663

 Score =  424 bits (1090), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 239/650 (36%), Positives = 372/650 (57%), Gaps = 30/650 (4%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           M   IK+T PDG+ K    +    ++AESIS SLAKK+V   I+     +++ +R  G  
Sbjct: 1   MADLIKITMPDGTEKEVEQNTKPIEIAESISPSLAKKSVVAKIDDHFVGMNEGIRFSGKF 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD----KEQPFS 115
            ++T  +  +L V+RHS  H++A+A++ + P++   +G  I +GFYYD D     E+  +
Sbjct: 61  RLVTKGEDEALKVLRHSTTHLLAQALRRLHPKIHFGVGVAIANGFYYDTDDSDESEKQVA 120

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           +DE  +IE +M++++  + P   Q +S ++A ++F   ++ YK+ ++   PA + +T+ +
Sbjct: 121 ADEFPKIEAEMKKLVQANIPIQHQIVSRKEALKIF--AEDPYKIALINDFPADQEITIVK 178

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYG-TAWNTQQELTQY 234
           QG++ DL RG  V STG +K F  L  VAGAYWRG S+  M+ RIYG + WN +  L   
Sbjct: 179 QGDYTDLDRGGLVPSTGWIKHF-ALTSVAGAYWRGMSDNQMMQRIYGLSEWNPEN-LEAQ 236

Query: 235 LYFLEESEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YE 292
              LEE ++RDHR + ++M+LF    E G+G+  W   G  I +T+  Y+  K + + Y 
Sbjct: 237 KKALEERKERDHRTIGKQMELFFTNPEIGAGLPVWLPNGAAIRRTIEDYLVEKERQNGYM 296

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
            + TP V +  L+++SGHWD YR +MF    A+D         L+PMNCP H+ +F H  
Sbjct: 297 NVYTPVVSNLDLYKRSGHWDHYRDDMFPAMTANDG----EQLELRPMNCPSHIEIFEHEP 352

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
           +SYR+LP R+AEFG ++R E SG+L GL RVR  T +D H     EQ+  E   I  LI 
Sbjct: 353 RSYRDLPYRIAEFGQMHRWEKSGALTGLSRVREMTLNDGHTVVAPEQVEPEFKGILQLIR 412

Query: 413 SIYKDFGF--EKIMVKLSTRPEKRV----GSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
            +Y DFGF  +    +LS R  K        DA+W+ A+  +K  +D +       ++  
Sbjct: 413 DVYHDFGFTDQDYRFRLSYRDPKNTKKYYDDDAMWEHAQAALKRAMDDMG------LDYF 466

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
              GE AFYGPK +   K A+G +    TIQ+DF LP RF+  Y     +   PV+IHR 
Sbjct: 467 EAEGEAAFYGPKLDIQFKTALGNEETMSTIQLDFLLPERFDMKYTGEDGKDHRPVLIHRG 526

Query: 527 VFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETD 585
           V G++ERF+  +IE +KG  P WL+P+QA+V  +   A  +YA+ I + L      I+ D
Sbjct: 527 VVGTMERFVAFLIEKYKGQFPTWLAPVQAVVIPVNYGAHGDYARNIYSKLMKDGRRIKLD 586

Query: 586 FRNETINYKIREHSIK-KIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
            R+E + Y IR+  +  K P I++ GD+E  + S+ +R  GS  T+++ +
Sbjct: 587 NRDEKLGYLIRDAQVNLKTPYILVVGDQELRDNSVTVRFRGSDQTKEMKI 636


>gi|290980243|ref|XP_002672842.1| predicted protein [Naegleria gruberi]
 gi|284086421|gb|EFC40098.1| predicted protein [Naegleria gruberi]
          Length = 720

 Score =  424 bits (1090), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 233/642 (36%), Positives = 371/642 (57%), Gaps = 49/642 (7%)

Query: 39  VAVAINGKVCDLSDPVRE---------GSIEIITPEDPRSLAVIRHSCAHIMAEAV-QSI 88
           +   INGK+ D++D   E          +IE  T E      V  HS AHI+  A+ Q  
Sbjct: 90  LVCKINGKLTDMNDTFSEILNNQESNNNNIEFFTFESVEGKEVFWHSTAHILGCALEQKF 149

Query: 89  WPEVQVAIGP---------IIEDGFYYD--FDKEQPFSSDELAQIEKKMQEIIARDSPFL 137
              +++  GP         ++  GF+Y+   +  +  ++++L ++EK MQ+++     F 
Sbjct: 150 GSSLKLCDGPPLVSKEASQVLNGGFFYEGFLENNERITTEQLEELEKFMQQVVKEKHSFQ 209

Query: 138 KQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
           K +++ E ARE+F  K   +K++I+E IP+ E +T+Y+ G   DLCRGPH+ +T  +K  
Sbjct: 210 KIHITKELAREIF--KYNQFKLDIIEKIPSGEPITMYKCGNLVDLCRGPHIPNTSMIKAV 267

Query: 198 FKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFH 257
            KL K++GAYW+GD   P+L R+YG ++   ++L  +   +EE+ KRDHR +A++ DLF 
Sbjct: 268 -KLTKLSGAYWKGDEKSPLLQRVYGISFPKAKQLEDWQTLIEEALKRDHRLIAKKQDLFF 326

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
             E   G  F+   G ++F  L+ ++R++  K  Y+E+ TPQ+  + LW+ SGHW  Y+ 
Sbjct: 327 FHEYSPGTPFFLPHGTRLFNKLVEFIRKEYRKRGYDEVITPQMFQKELWETSGHWQHYKD 386

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
           +MF V   + T     T  +KPMNCP H  +F+  ++SYRELPVRLA+F  ++RNEP GS
Sbjct: 387 DMFTV--IEGTQHKEETIGIKPMNCPAHCLMFDSKIRSYRELPVRLADFSPLHRNEPRGS 444

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD-FGFEKIMVKLSTRPEKRV 435
           L GL RVR F QDD+H+FCT +Q+ +E       +  +Y + FGF  +   LSTRPEK V
Sbjct: 445 LTGLTRVRRFHQDDSHIFCTHDQVKSEIENCLQFVKFVYSEIFGF-NLRFNLSTRPEKFV 503

Query: 436 GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGT 495
           G   +WD AE  +K  LD          N  +  G+GAFYGPK +  ++D++ R  QC T
Sbjct: 504 GDIEMWDKAEQSLKECLDG--------YNWKLNEGDGAFYGPKIDIQIEDSLQRFHQCAT 555

Query: 496 IQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQA 555
           IQ+DF LP RFN  Y + + +   PV+IHRA+ GSIERFI ++ E+  G  P WL+P Q 
Sbjct: 556 IQLDFQLPRRFNLKYQSQNDQLITPVIIHRAILGSIERFIALLTEHLSGRWPFWLNPRQC 615

Query: 556 IVTTIT---SSAVEYAQEIAN-LLKS-------HHLSIETDFRNETINYKIREHSIKKIP 604
            +  ++   +S V+Y +E+ + + K+        +  I+ D  ++T+  KIR+  + +  
Sbjct: 616 FICPVSAENASLVDYCKEVKDQIFKTAEERGVFSNYFIDVDLSDKTMKKKIRDAQVLQYN 675

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
            I++ G+KE  E+++ +R+   T    +  +DA+  + +E L
Sbjct: 676 FILVLGEKEMQEKTVSVRKRDGTLVGTMK-IDALLSMWEELL 716


>gi|145348874|ref|XP_001418868.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144579098|gb|ABO97161.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 674

 Score =  424 bits (1090), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 220/622 (35%), Positives = 360/622 (57%), Gaps = 21/622 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGS-DVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           IK+T PDG+ K+    AT   D+A  I + LA+ A+   ++G+  D+  P+  + ++ + 
Sbjct: 48  IKVTLPDGAQKDGTRFATTPFDIALGIHKKLAQSALVAKVDGEFWDMRRPLEGDCALALF 107

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQ 121
           T +D        HS AH++ EA++  +    + IGP IE+GFYYD +  E+  + ++   
Sbjct: 108 TFDDEEGKECYWHSSAHVLGEALELEYG-ADLTIGPAIEEGFYYDCYLGERTLTPEDTEI 166

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           I+ +M++II     F +  +S  +A E+FE  K  +K+E++ ++P    ++ YR G   D
Sbjct: 167 IKGRMEKIIKEKQEFQRIVVSRAEALEMFEENK--FKIELISNLPEDATISCYRCGPMVD 224

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+  T  +K    + + + A+WR D  +  L R+Y   + + + + +Y   +EE+
Sbjct: 225 LCRGPHLPDTAWLKSV-SVNQCSRAHWRADVTKDPLVRVYAVTFPSDKLMKEYTTRIEEA 283

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
           +KRDHR +    +LF       G  F+ + G +I+  L+ ++R K  + +Y+E+ TP + 
Sbjct: 284 KKRDHRTIGLNQELFFFHHLSPGSCFFQKHGARIYNNLVQFIREKYWEYEYDEVITPNIY 343

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  LW+ SGH   Y+ NMF+     +       F LKPMNCPGH  +F H  ++YRELP+
Sbjct: 344 NFDLWKTSGHAAHYKENMFSFNVEKEE------FGLKPMNCPGHCVMFAHRHRTYRELPM 397

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+A+FG ++RNE SG+LHGL RVR F QDDAH+FC ++QM  E       +  +Y+ FG 
Sbjct: 398 RVADFGVLHRNEFSGALHGLTRVRRFQQDDAHIFCREDQMEQELSGFLQFLDDVYEVFGL 457

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
              M KLSTRPE  +G   +WD AE  +K  LD  ++  + ++N G    +GAFYGPK +
Sbjct: 458 TYEM-KLSTRPEGYLGELEVWDKAEAALKSALD--RSGREWKLNEG----DGAFYGPKID 510

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
             + DA+ R +QC T+Q+DF LP RF+  YV+ ++    P++IHRA+ GS+ER   I+ E
Sbjct: 511 ITVFDALKRRFQCATVQLDFQLPIRFDLSYVDENNSSVRPIIIHRAILGSVERMFAILTE 570

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +F G  P WLSP Q ++  I+ ++ +Y  E+   L+      E D  +  +  K+RE  +
Sbjct: 571 HFAGKWPYWLSPKQVMIVPISEASRDYCYEVKRQLRKAGHFAEVDVTDRKMQKKVREAQL 630

Query: 601 KKIPIIIICGDKEASERSIGIR 622
            +   I++CG+ E +  ++ +R
Sbjct: 631 DQFNYILVCGESEKANETVNVR 652


>gi|332265240|ref|XP_003281636.1| PREDICTED: probable threonyl-tRNA synthetase 2, cytoplasmic isoform
           1 [Nomascus leucogenys]
          Length = 793

 Score =  424 bits (1089), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 236/607 (38%), Positives = 349/607 (57%), Gaps = 22/607 (3%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSCAH 79
            T   VA  IS+ LA+  V   +NG++ DL  P+   S +E++T ++  + AV  HS AH
Sbjct: 170 TTPYQVAAEISQELAESTVIAKVNGELWDLDRPLEGDSFLELLTFDNEEAQAVYWHSSAH 229

Query: 80  IMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQIEKKMQEIIARDSPFLK 138
           I+ EA++ ++    +  GP IE+GFYYD F +++  SS EL+ +E   + II    PF +
Sbjct: 230 ILGEAME-LYYGGHLCYGPPIENGFYYDMFIEDRAVSSTELSALENICKAIIKEKQPFER 288

Query: 139 QYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFF 198
             +S E   E+F+  K  +K  IL         T+YR G   DLC+GPHVR TG++K   
Sbjct: 289 LEVSKEILLEMFKCNK--FKCRILNEKVHTAATTVYRCGPLIDLCKGPHVRHTGKIKTI- 345

Query: 199 KLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI 258
           K+ K +  YW G+     L RIYG ++   + +  +    EE++ RDHRK+ +E +LF  
Sbjct: 346 KIFKNSSTYWEGNPEMETLQRIYGISFPDNKMMRNWEKSQEEAKNRDHRKIGKEQELFFF 405

Query: 259 AEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRAN 317
            +   G  F+  +G  I+ TL  ++R +  K D+ E+ +P + +  LW+ SGHW  Y  N
Sbjct: 406 HDLSPGSCFFLPRGAFIYNTLTDFIREEYHKRDFTEVLSPNMYNSKLWEASGHWQHYSEN 465

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           MF  +   DT      FALKPMNCPGH  +F H  +S+RE+P+R A+FG ++RNE SG+L
Sbjct: 466 MFTFEIEKDT------FALKPMNCPGHCLMFAHRPRSWREMPIRFADFGVLHRNELSGTL 519

Query: 378 HGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGS 437
            GL RVR F QDDAH+FCT EQ+  E       + S+Y  FGF    + LSTRPE  +G 
Sbjct: 520 SGLTRVRRFQQDDAHIFCTVEQIEEEIKGCLQFLQSVYSTFGF-SFQLNLSTRPENFLGE 578

Query: 438 DALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ 497
             +W++AE  ++  L  +      ++N     G+GAFYGPK +  +KDAIGR  QC TIQ
Sbjct: 579 IEMWNEAEKQLQSSL--MDFGEPWKMNP----GDGAFYGPKIDIKIKDAIGRYHQCATIQ 632

Query: 498 VDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI 556
           +DF LP RFN  YV+    +K  PV+IHRA+ GS+ER I I+ EN+ G  P WLSP Q +
Sbjct: 633 LDFQLPVRFNLTYVSKDGDDKKRPVIIHRAILGSVERMIAILSENYGGKWPFWLSPHQVM 692

Query: 557 VTTITSSAVEYAQEIANLLKSHHLSIETDF-RNETINYKIREHSIKKIPIIIICGDKEAS 615
           V  +  +  +YA ++++         + D   N T+N KIR   + +   I++ G+KE  
Sbjct: 693 VIPVGPACEKYALQVSSEFFEEGFMADVDLDHNCTLNKKIRNAQLAQYNFILVVGEKEKV 752

Query: 616 ERSIGIR 622
             ++ +R
Sbjct: 753 NNAVNVR 759


>gi|256825369|ref|YP_003149329.1| threonyl-tRNA synthetase [Kytococcus sedentarius DSM 20547]
 gi|256688762|gb|ACV06564.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Kytococcus
           sedentarius DSM 20547]
          Length = 660

 Score =  424 bits (1089), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 237/667 (35%), Positives = 361/667 (54%), Gaps = 56/667 (8%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           I LT  +G+ +      TG+D+         ++ VA  +NG++ DL   V +G  +E + 
Sbjct: 4   ISLTV-NGASRTAETGTTGTDLFGD-----DRRVVATRVNGELRDLYREVADGDEVEAVL 57

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            ++P  L ++RHS AH++A+AVQ  + + ++ IGP I DGFYYDFD  +PF+ ++L ++ 
Sbjct: 58  IDEPDGLDILRHSAAHVLAQAVQQEFADAKLGIGPPITDGFYYDFDVAEPFTPEDLKKLS 117

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL--------------------E 163
           K MQ II     F+++ +S   A+   E   E YKVE++                     
Sbjct: 118 KTMQRIINEGQTFVRREVSDADAQ--VELAGEPYKVELIGLKGGSAEEAAEGASAEVGGA 175

Query: 164 SIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
            +   +NV       W DLCRGPH+ ST  +   F L + A AYWRG    P L R+YGT
Sbjct: 176 QLTIYDNVRKDGTVAWGDLCRGPHLPSTKLIGNGFALTRSAAAYWRGSEKNPQLQRVYGT 235

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISY 282
           AW +++EL  Y   L E+E+RDHRKL  EMDL+   E+ G G+  +H KG  + +T+  Y
Sbjct: 236 AWPSKEELKAYQERLAEAERRDHRKLGAEMDLYSFPEEVGPGLPVFHPKGAILRRTMEDY 295

Query: 283 M-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           + +R +++ +  + TP +  + L+  SGH   Y   M  +   DD   D + + +K MNC
Sbjct: 296 VWKRHVEEGFSYVTTPHLSKEGLFHTSGHLPYYADGM--MPELDD---DGQAYRIKAMNC 350

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
           P H  ++    +SYRELP+R  EFG+VYRNE SG L GL RVR  TQDD+H + T+EQ  
Sbjct: 351 PMHNLIYRSQQRSYRELPLRYFEFGTVYRNEKSGVLQGLTRVRMITQDDSHSYVTREQAP 410

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPE------KRVGSDALWDDAENIMKGVLDTI 455
            E   + + ++S+ +DFG +   ++LSTR E      K +G+D  W +A  +++ V    
Sbjct: 411 GEVKHLLDFVLSLLRDFGMDDYYLELSTRAEEGDKKDKFIGTDEQWAEATAVLEQVA--- 467

Query: 456 KNSSQDRINTGVLL----GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
                    TG+ L    G  A+YGPK     +DAIGR WQ  TIQ DFN P RF   Y 
Sbjct: 468 -------TETGLELVPDPGGAAYYGPKISVQARDAIGRTWQMSTIQYDFNQPERFGLEYS 520

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
            +   +  PVMIH A FGSIERFIG+++E++ G  P+WL+P+Q +   +      Y +++
Sbjct: 521 AADGTRQQPVMIHSAKFGSIERFIGVLVEHYAGQFPVWLAPVQVLGVPVAEDFQPYLEDV 580

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
              +++  +  E D  ++    KIR  S  K+P  +I G ++    ++  R    +    
Sbjct: 581 LAQMRAQGIRTEIDASDDRFPKKIRNASKSKVPFTLIAGGEDRDAGAVSFRFRDGSQENG 640

Query: 632 VSLLDAI 638
           V + DAI
Sbjct: 641 VPVADAI 647


>gi|281203096|gb|EFA77297.1| threonyl-tRNA synthetase [Polysphondylium pallidum PN500]
          Length = 716

 Score =  423 bits (1088), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 228/624 (36%), Positives = 359/624 (57%), Gaps = 23/624 (3%)

Query: 5   IKLTFPDGSI-KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIEIIT 63
           IK+T PDG +   F    T   VA+ ISR LA   V+  ++ ++ D++ P+ +    ++ 
Sbjct: 83  IKITLPDGKVVDGFAGKTTPYLVAKGISRGLADAIVSSLVDEQIWDIARPLEKDCNLVLC 142

Query: 64  PEDPRS-LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF--DKEQPFSSDELA 120
             D  +      HS AHI+ +A++ I+   Q+ IGP   +GFYYD      +  SS++ A
Sbjct: 143 KFDSEAGKKTFWHSSAHILGQAMERIYGG-QLCIGPATNEGFYYDMAMSDNKIVSSEDYA 201

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            I +   +I+     F +  +  + A +LF+  K  YK EI+  IPA++ V+LYR G   
Sbjct: 202 TIVEVANKIVQEKQAFERLAVPRDLALQLFKYNK--YKTEIISKIPAEDTVSLYRCGTLV 259

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ +T  VK F  ++K + AYW G +    L R+YG A+  +++L +Y  F++E
Sbjct: 260 DLCRGPHLPNTSYVKAF-SVVKNSSAYWLGKAENDPLQRVYGIAFPDKKQLEEYQNFMKE 318

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQV 299
           +  RDHR + +  +LF       G  F+   G +I+  L+ ++R +  +  + E+ TP +
Sbjct: 319 AALRDHRNVGKNQELFFFHPYSPGCAFFLPHGTRIYNRLVEFIRHEYHRRGFTEVITPTM 378

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             Q LW++SGHW  Y  NMF +KC D      + ++LKPMNCP H  +F +  +SYRELP
Sbjct: 379 FSQQLWEESGHWAKYGENMFNLKCDD------QNYSLKPMNCPSHCLMFGNRSRSYRELP 432

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R A+FG ++RNE +G+L GL RVR F QDDAH+FCT + +  E       +  +Y  FG
Sbjct: 433 IRFADFGVLHRNELAGALTGLTRVRKFQQDDAHIFCTPDMVEQEISSCLEFMQHVYGIFG 492

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           FE   ++LSTRP+  +G+ A WD AEN ++  L+  K     ++N     G+GAFYGPK 
Sbjct: 493 FE-FQLELSTRPDNHLGTAAQWDVAENSLRDALN--KFGKPWKLNP----GDGAFYGPKI 545

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH-PVMIHRAVFGSIERFIGIM 538
           +  + D + R  QC TIQ+DF LP RF   Y+ S  E+ H PV+IHRA+ GS+ER + I+
Sbjct: 546 DIQIFDVLKRAHQCATIQLDFQLPIRFELEYMGSGPEERHRPVIIHRAILGSVERMMAIL 605

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+  G  P W+SP Q +V T++    +YA+ +   L       + D  ++T+  K+RE 
Sbjct: 606 IEHTAGKWPFWVSPRQVLVATVSEKFADYAKSVTKTLTDAGFYADVDLSDKTLPKKVREA 665

Query: 599 SIKKIPIIIICGDKEASERSIGIR 622
            + +   I++ G++E +  ++ +R
Sbjct: 666 QLSQYNYILVVGEEELNNNTVNVR 689


>gi|290889941|ref|ZP_06553027.1| hypothetical protein AWRIB429_0417 [Oenococcus oeni AWRIB429]
 gi|290480383|gb|EFD89021.1| hypothetical protein AWRIB429_0417 [Oenococcus oeni AWRIB429]
          Length = 663

 Score =  423 bits (1088), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 238/650 (36%), Positives = 372/650 (57%), Gaps = 30/650 (4%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           M   IK+T PD + K    +    ++AESIS SLAKK+V   I+     +++ +R  G  
Sbjct: 1   MADLIKITMPDDTEKEVEQNTKPIEIAESISPSLAKKSVVAKIDDHFVGMNEGIRFSGKF 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD----KEQPFS 115
            ++T  +  +L V+RHS  H++A+A++ + P++   +G  I +GFYYD D     E+  +
Sbjct: 61  RLVTKGEDEALKVLRHSTTHLLAQALRRLHPKIHFGVGVAIANGFYYDTDDSDESEKQVA 120

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           +DE  +IE +M++++  + P   Q +S ++A ++F   ++ YK+ ++   PA + +T+ +
Sbjct: 121 ADEFPKIEAEMKKLVQANIPIQHQIVSRKEALKIF--AEDPYKIALINDFPADQEITIVK 178

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYG-TAWNTQQELTQY 234
           QG++ DL RG  V STG +K F  L  VAGAYWRG S+  M+ RIYG + WN +  L   
Sbjct: 179 QGDYTDLDRGGLVPSTGWIKHF-ALTSVAGAYWRGMSDNQMMQRIYGLSEWNPEN-LEAQ 236

Query: 235 LYFLEESEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYE 292
              LEE ++RDHR + ++M+LF    E G+G+  W   G  I +T+  Y+  ++ ++ Y 
Sbjct: 237 KKALEERKERDHRTIGKQMELFFTNPEIGAGLPVWLPNGAAIRRTIEDYLVEKERQNSYM 296

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
            + TP V +  L+++SGHWD YR +MF    ADD         L+PMNCP H+ +F H  
Sbjct: 297 NVYTPVVSNLDLYKRSGHWDHYRDDMFPAMTADDG----EQLELRPMNCPSHIEIFEHEP 352

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
           +SYR+LP R+AEFG ++R E SG+L GL RVR  T +D H     EQ+  E   I  LI 
Sbjct: 353 RSYRDLPYRIAEFGQMHRWEKSGALTGLSRVREMTLNDGHTVVAPEQVEPEFKGILQLIR 412

Query: 413 SIYKDFGF--EKIMVKLSTRPEKRV----GSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
            +Y DFGF  +    +LS R  K        DA+W+ A+  +K  +D +       ++  
Sbjct: 413 DVYHDFGFTDQDYRFRLSYRDPKNTKKYYDDDAMWEHAQAALKRAMDDMG------LDYF 466

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
              GE AFYGPK +   K A+G +    TIQ+DF LP RF+  Y     +   PV+IHR 
Sbjct: 467 EAEGEAAFYGPKLDIQFKTALGNEETMSTIQLDFLLPERFDMKYTGEDGKDHRPVLIHRG 526

Query: 527 VFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETD 585
           V G++ERF+  +IE +KG  P WL+P+QA+V  +   A  +YA+ I + L      I+ D
Sbjct: 527 VVGTMERFVAFLIEKYKGQFPTWLAPVQAVVIPVNYGAHGDYARNIYSKLMKDGRRIKLD 586

Query: 586 FRNETINYKIREHSIK-KIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
            R+E + Y IR+  +  K P I++ GD+E  + S+ +R  GS  T+++ +
Sbjct: 587 NRDEKLGYLIRDAQVNLKTPYILVVGDQELRDNSVTVRFRGSDQTKEMKI 636


>gi|290989139|ref|XP_002677200.1| threonyl-tRNA synthetase [Naegleria gruberi]
 gi|284090806|gb|EFC44456.1| threonyl-tRNA synthetase [Naegleria gruberi]
          Length = 672

 Score =  423 bits (1088), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 227/646 (35%), Positives = 369/646 (57%), Gaps = 23/646 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVH-ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGS 58
           +  +I +T PD S +    +  T  D+A SIS  LA   V   +NG + D+   +  + +
Sbjct: 34  LGKEITITLPDNSTRPGKAYETTPHDIAMSISAGLAANCVVAKVNGALWDMGRALEGDCT 93

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYD-FDKEQPFSS 116
           +E++  + P +  V  HS +H+M EA++ ++ +  +  GP +EDG FYY+ +  +   S 
Sbjct: 94  LELLKFDHPEAKEVFWHSSSHVMGEAMEDVF-KCFLCKGPPLEDGGFYYEAYMGDNSVSE 152

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYR 175
            +  +++  + +II    PF +  ++  +A ELF   K  +KVEIL E +   +  ++YR
Sbjct: 153 TDYPKVKDAVTKIINEKQPFERLLITKAEALELFADNK--FKVEILSEKVKEGDYCSVYR 210

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
            G   D C+GPH+ +TG+V  F ++ K + +YWR D+++  L R+Y  ++  ++ + ++ 
Sbjct: 211 CGRLIDPCKGPHLLNTGKVTTF-EVTKNSSSYWRADASKETLQRVYAMSFPDKKLMKEWQ 269

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEI 294
             +EE++KRDHR + ++ +L+       G++F+   G ++F ++ S MR +     Y E+
Sbjct: 270 TLMEEAKKRDHRIIGKDQELWFFHPYAPGMVFFLPHGQRLFNSIQSLMRNEYWHRGYSEV 329

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
            TP V    LW+ SGHWD Y  NMF ++       D    +LKPMNCP H  +F H  +S
Sbjct: 330 QTPNVFHSDLWKTSGHWDKYAENMFVLEI------DKAQHSLKPMNCPSHCLMFKHRTRS 383

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YRELP+R A+FG ++RNE  G+L G+ R+R F QDDAH+FC  +Q+ +E +    ++  I
Sbjct: 384 YRELPIRFADFGVLHRNELKGALTGMTRLRKFQQDDAHIFCRPDQIKSEIMGALRMMQDI 443

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           YK FGF    + LSTRPEK +G  + WD+AE  ++  L+   +S Q         G+GAF
Sbjct: 444 YKIFGF-GFRLFLSTRPEKYLGEISQWDEAEGQLEAALNEFGHSWQKN------EGDGAF 496

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK + ++ DA+ R+ QC T+Q+DF LP RF+  Y      +  PV++HRA+FGS+ERF
Sbjct: 497 YGPKIDILISDALKREHQCATVQLDFQLPIRFDLTYAAEDKTESRPVIVHRAIFGSLERF 556

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
           + I  E+F G  P WLSP QAIV  +++   EYA+++   L      ++ D  +  I+ K
Sbjct: 557 LAIATEHFGGKWPFWLSPRQAIVVPVSNKCNEYAEKVQKRLHEAKYYVDVDLSSNRIDKK 616

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
           IR   + +   I++ G KE    S+ IR   S   Q V  ++ + I
Sbjct: 617 IRNAQLSQYNYILVVGPKEMESDSVNIRIRDSDKEQGVKTIEELLI 662


>gi|154300294|ref|XP_001550563.1| hypothetical protein BC1G_11336 [Botryotinia fuckeliana B05.10]
 gi|150856659|gb|EDN31851.1| hypothetical protein BC1G_11336 [Botryotinia fuckeliana B05.10]
          Length = 787

 Score =  423 bits (1087), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 248/694 (35%), Positives = 372/694 (53%), Gaps = 65/694 (9%)

Query: 2   PSD-IKLTFPDGSIK-NFPVHATGSDVAESISRSLAKKAVAVAING---KVCDLSDPV-R 55
           P D I +T  DGS+K       T + +AE IS+SL K+ V   +NG   ++ DL  P+ +
Sbjct: 79  PRDPITITLADGSVKEGIAWETTPAQIAEGISKSLLKRTVVAKLNGDSEQLWDLERPLEK 138

Query: 56  EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD--FDKEQP 113
           + ++E++  E+     V  HS AHI+ EA +  +    + IGP I++GFYY+     +  
Sbjct: 139 DCTLELLPFENEEGRRVFWHSSAHILGEASERRF-GCSLCIGPPIDNGFYYEMGLPNQGT 197

Query: 114 FSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVT 172
            +  +   +E  + +I+     F +  LS +   E+F+  K  YK  I+ + I    N T
Sbjct: 198 VTDADWKPLETLVGQIVKEKQKFERLVLSKDDLLEMFKDNK--YKQHIIKDKIADGTNTT 255

Query: 173 LYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELT 232
           +YR G   DLCRGPHV +TG+++ F  +MK + +Y+ G+     L RIYG ++  ++++ 
Sbjct: 256 VYRNGPLIDLCRGPHVPNTGRIETF-AIMKNSASYFLGNKENDSLQRIYGVSFPDKKQMA 314

Query: 233 QYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDY 291
           ++  FLEE+ KRDHRKL ++ +LF   E   G   W   G +I+ T++S++R +     Y
Sbjct: 315 EHKKFLEEAAKRDHRKLGKDQELFFFHEMSPGSAMWLPHGARIYNTIMSFLREQYWTRGY 374

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           EE+ TP + +  LW+ SGHW  Y+ +MF      DT      FALKPMNCPGH  +F H 
Sbjct: 375 EEVITPNMYNSELWKTSGHWAYYKDDMFTFPVEKDT------FALKPMNCPGHCLMFGHR 428

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI 411
            +S+RELP R+A+FG ++RNE SG+L GL RVR F QDDAH+FC ++Q+ +E   + + +
Sbjct: 429 ERSHRELPWRVADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCREDQIKDEITGLFDFL 488

Query: 412 ISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
            +IY   GF    + LSTRPEK +G    WD AE  ++  LD    ++   +   +  G+
Sbjct: 489 KAIYGLLGF-TFKLNLSTRPEKYLGKLETWDMAEEKLRSALDEFA-ATDGGVPWVLNEGD 546

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH----------------- 514
           GAFYGPK +  + D + R+WQC TIQ+DF LP  F   Y                     
Sbjct: 547 GAFYGPKIDITICDVLKREWQCATIQLDFQLPQNFGLEYNTGDVPTKKDEEAVKEPVVKP 606

Query: 515 ---------------------SEKC-HPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
                                +  C  PVMIHRA+ GSIERF  I+IE+F G  P WLSP
Sbjct: 607 KKTTEPEDPNAPPKERVYKPLTPGCARPVMIHRAMAGSIERFTAILIEHFAGKWPFWLSP 666

Query: 553 IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
            Q +V  +     EYA+E+ ++     + I+ D    T+  KIR   + +   I + GD 
Sbjct: 667 RQILVIPVGVGYFEYAKEVQSIFHKQQMFIDVDLSGNTLQKKIRTGQLAQYNFIFVVGDT 726

Query: 613 EASERSIGIRRFGSTTTQK----VSLLDAIPILT 642
           E   R + +R    T++Q     VSL +AI  LT
Sbjct: 727 EMKGREVNVRNRDDTSSQDRGKPVSLQEAIEKLT 760


>gi|68491354|ref|XP_710514.1| hypothetical protein CaO19.5685 [Candida albicans SC5314]
 gi|46431727|gb|EAK91259.1| hypothetical protein CaO19.5685 [Candida albicans SC5314]
          Length = 706

 Score =  423 bits (1087), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 233/615 (37%), Positives = 350/615 (56%), Gaps = 25/615 (4%)

Query: 5   IKLTFPDGSIKNFPVHATGS-DVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI--EI 61
           IK+T  DG+IK    + T   D+A SI +S A++ V   ++GK+ D+  P+ EG +  E 
Sbjct: 59  IKITLRDGTIKEGTAYETSPMDIANSIGKSFAERQVIAKVDGKLWDMPRPL-EGDVKLEF 117

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF---DKEQPFSSDE 118
           +  E P   AV  HS AHI+ EA +  +    ++ GP  EDGF+YD    + E   +  +
Sbjct: 118 LDFEHPEGKAVFWHSSAHILGEACECHYG-CHLSHGPPTEDGFFYDMSINNGETFVTQAD 176

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQG 177
              +E+   + I     F +  ++ E+  ++F   K  YKV+ + + IP   + T+YR G
Sbjct: 177 FGNLEQVATKAIKEKQKFERLEMTKEQLLKMFHYNK--YKVKFISDKIPDGTSTTVYRCG 234

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
              DLC GPH+  +G++K F K++K + +Y+ GD+    L R+YG ++  ++ +T++L F
Sbjct: 235 PLIDLCVGPHIPHSGRIKAF-KVLKNSSSYFLGDATNDSLQRVYGISFPDKKLMTEHLKF 293

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINT 296
           L E+ +RDHRK+ RE +LF   E   G   W   G +I+ TL+  +R +  K  YEE+ T
Sbjct: 294 LAEAAERDHRKIGREQELFIFNEMSPGSAMWLPHGARIYNTLVDTLRTEYRKRGYEEVIT 353

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +    LW+ SGHW +Y+ NMF+ +   +T      F LKPMNCPGH  +F    +SYR
Sbjct: 354 PNMYSTKLWETSGHWQNYKENMFSFEVEKET------FGLKPMNCPGHCILFKSRERSYR 407

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ELP R+A+FG ++RNE SG+L GL RVR F QDDAH+FCT +Q+  E   + + +  +Y 
Sbjct: 408 ELPWRVADFGVIHRNEFSGALSGLTRVRRFQQDDAHIFCTTDQIGTEIAGVFDFLKKMYG 467

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
            FGFE   ++LSTRPEK VG    W+ AE  ++  L+      +  +N G    +GAFYG
Sbjct: 468 IFGFE-FKMELSTRPEKYVGDLDTWNSAEKKLEQALNDFLGEGKWELNPG----DGAFYG 522

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK + ++ DA+ R +QC TIQ+DF LP RF   Y +       PVMIHRA+ GS+ER   
Sbjct: 523 PKIDIMISDALKRWFQCATIQLDFQLPQRFELEYKSDKGPNTRPVMIHRAILGSVERMTA 582

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLK-SHHLSIETDFRNETINYKI 595
           I+ E++KG  P WLSP Q ++  +     +YAQ++   L   +    + D    T+  KI
Sbjct: 583 ILTEHYKGKWPFWLSPRQILIVPVGPKYYDYAQKLQKKLNDDYFFYCDVDVSGNTLPKKI 642

Query: 596 REHSIKKIPIIIICG 610
           R   + K   I I G
Sbjct: 643 RTGQMYKYNFIFIVG 657


>gi|238882425|gb|EEQ46063.1| threonyl-tRNA synthetase [Candida albicans WO-1]
          Length = 706

 Score =  423 bits (1087), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 233/615 (37%), Positives = 350/615 (56%), Gaps = 25/615 (4%)

Query: 5   IKLTFPDGSIKNFPVHATGS-DVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI--EI 61
           IK+T  DG+IK    + T   D+A SI +S A++ V   ++GK+ D+  P+ EG +  E 
Sbjct: 59  IKITLRDGTIKEGTAYETSPMDIANSIGKSFAERQVIAKVDGKLWDMPRPL-EGDVKLEF 117

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF---DKEQPFSSDE 118
           +  E P   AV  HS AHI+ EA +  +    ++ GP  EDGF+YD    + E   +  +
Sbjct: 118 LDFEHPEGKAVFWHSSAHILGEACECHYG-CHLSHGPPTEDGFFYDMSINNGETFVTQAD 176

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQG 177
              +E+   + I     F +  ++ E+  ++F   K  YKV+ + + IP   + T+YR G
Sbjct: 177 FGNLEQVATKAIKEKQKFERLEMTKEQLLKMFHYNK--YKVKFISDKIPDGTSTTVYRCG 234

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
              DLC GPH+  +G++K F K++K + +Y+ GD+    L R+YG ++  ++ +T++L F
Sbjct: 235 PLIDLCVGPHIPHSGRIKAF-KVLKNSSSYFLGDATNDSLQRVYGISFPDKKLMTEHLKF 293

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINT 296
           L E+ +RDHRK+ RE +LF   E   G   W   G +I+ TL+  +R +  K  YEE+ T
Sbjct: 294 LAEAAERDHRKIGREQELFIFNEMSPGSAMWLPHGARIYNTLVDTLRTEYRKRGYEEVIT 353

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +    LW+ SGHW +Y+ NMF+ +   +T      F LKPMNCPGH  +F    +SYR
Sbjct: 354 PNMYSTKLWETSGHWQNYKENMFSFEVEKET------FGLKPMNCPGHCILFKSRERSYR 407

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ELP R+A+FG ++RNE SG+L GL RVR F QDDAH+FCT +Q+  E   + + +  +Y 
Sbjct: 408 ELPWRVADFGVIHRNEFSGALSGLTRVRRFQQDDAHIFCTTDQIGTEIAGVFDFLKKMYG 467

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
            FGFE   ++LSTRPEK VG    W+ AE  ++  L+      +  +N G    +GAFYG
Sbjct: 468 IFGFE-FKMELSTRPEKYVGDLDTWNSAEKKLEQALNDFLGEGKWELNPG----DGAFYG 522

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK + ++ DA+ R +QC TIQ+DF LP RF   Y +       PVMIHRA+ GS+ER   
Sbjct: 523 PKIDIMISDALKRWFQCATIQLDFQLPQRFELEYKSDKGPNTRPVMIHRAILGSVERMTA 582

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLK-SHHLSIETDFRNETINYKI 595
           I+ E++KG  P WLSP Q ++  +     +YAQ++   L   +    + D    T+  KI
Sbjct: 583 ILTEHYKGKWPFWLSPRQILIVPVGPKYYDYAQKLQKKLNDDYFFYCDVDVSGNTLPKKI 642

Query: 596 REHSIKKIPIIIICG 610
           R   + K   I I G
Sbjct: 643 RTGQMYKYNFIFIVG 657


>gi|114600754|ref|XP_001153291.1| PREDICTED: threonyl-tRNA synthetase, cytoplasmic isoform 1 [Pan
           troglodytes]
          Length = 619

 Score =  423 bits (1087), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 237/599 (39%), Positives = 345/599 (57%), Gaps = 24/599 (4%)

Query: 30  ISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIRHSCAHIMAEAVQSI 88
           +S+ LA   V   +N  V DL  P+ E  S+E++  ED  + AV  HS AHIM EA++ +
Sbjct: 5   LSQGLADNTVIAKVNNLVWDLDRPLEEDCSLELLKFEDEEAQAVYWHSSAHIMGEAMERV 64

Query: 89  WPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKAR 147
           +    +  GP IE+GFYYD + +E   SS++ + +E   ++II     F +  +  E   
Sbjct: 65  YGGC-LCYGPPIENGFYYDMYLEEGGVSSNDFSSLEALCKKIIKEKQAFERLEVKKETLL 123

Query: 148 ELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAY 207
            +F+  K  +K  IL         T+YR G   DLCRGPHVR TG++K   K+ K +  Y
Sbjct: 124 AMFKYNK--FKCRILNEKVNTPTTTVYRCGPLIDLCRGPHVRHTGKIKAL-KIHKNSSTY 180

Query: 208 WRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIF 267
           W G ++   L RIYG ++   + L ++  F EE++ RDHRK+ R+ +L+   E   G  F
Sbjct: 181 WEGKADMETLQRIYGISFPDPKMLKEWEKFQEEAKNRDHRKIGRDQELYFFHELSPGSCF 240

Query: 268 WHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADD 326
           +  KG  I+  LI ++R +  K  ++E+ TP + +  LW  SGHW  Y  NMF+ +   +
Sbjct: 241 FLPKGAYIYNALIEFIRSEYRKRGFQEVVTPNIFNSRLWMTSGHWQHYSENMFSFEVEKE 300

Query: 327 TIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
                  FALKPMNCPGH  +F+H  +S+RELP+RLA+FG ++RNE SG+L GL RVR F
Sbjct: 301 L------FALKPMNCPGHCLMFDHRPRSWRELPLRLADFGVLHRNELSGALTGLTRVRRF 354

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
            QDDAH+FC  EQ+ +E     + + ++Y  FGF    + LSTRPEK +G   +WD AE 
Sbjct: 355 QQDDAHIFCAMEQIEDEIKGCLDFLRTVYSVFGF-SFKLNLSTRPEKFLGDIEVWDQAEK 413

Query: 447 IMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF 506
            ++  L+      +  +N+    G+GAFYGPK +  +KDAIGR  QC TIQ+DF LP RF
Sbjct: 414 QLENSLNEFGEKWE--LNS----GDGAFYGPKIDIQIKDAIGRYHQCATIQLDFQLPIRF 467

Query: 507 NAFYVNSH--SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA 564
           N  YV SH   +K  PV++HRA+ GS+ER I I+ EN+ G  P WLSP Q +V  +  + 
Sbjct: 468 NLTYV-SHDGDDKKRPVIVHRAILGSVERMIAILTENYGGKWPFWLSPRQVMVVPVGPTC 526

Query: 565 VEYAQEIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
            EYAQ++           + D     T+N KIR   + +   I++ G+KE    ++ IR
Sbjct: 527 DEYAQKVRQQFHDAKFMADIDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKISGTVNIR 585


>gi|227908819|ref|NP_758514.2| probable threonyl-tRNA synthetase 2, cytoplasmic [Mus musculus]
 gi|81896660|sp|Q8BLY2|SYTC2_MOUSE RecName: Full=Probable threonyl-tRNA synthetase 2, cytoplasmic;
           AltName: Full=Threonine--tRNA ligase; Short=ThrRS;
           AltName: Full=Threonyl-tRNA synthetase-like protein 2
 gi|26334063|dbj|BAC30749.1| unnamed protein product [Mus musculus]
          Length = 790

 Score =  423 bits (1087), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 237/626 (37%), Positives = 356/626 (56%), Gaps = 22/626 (3%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAH 79
            T   VA  IS+ LA+  V   +NG + DL  P+  + ++E++  ++  + AV  HS AH
Sbjct: 167 TTPYQVAAGISKELAEHTVIAKVNGVLWDLDRPLEGDSTVELLMFDNEEAQAVYWHSSAH 226

Query: 80  IMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQIEKKMQEIIARDSPFLK 138
           I+ EA++ ++    +  GP IE+GFYYD F +++  SS EL+ +E   + II    PF +
Sbjct: 227 ILGEAME-LYYGGHLCYGPPIENGFYYDMFIEDRVVSSTELSALENICKTIIKEKQPFER 285

Query: 139 QYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFF 198
             +S +   E+F+  K  +K  IL+        T+YR G   DLC+GPHVR TG++K   
Sbjct: 286 LEVSKDTLLEMFKYNK--FKCRILKEKVDTPTTTVYRCGPLIDLCKGPHVRHTGKIKAI- 342

Query: 199 KLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI 258
           K+ K +  YW G+     L RIYG ++   + +  +  F EE++ RDHRK+ +E +LF  
Sbjct: 343 KIFKNSSTYWEGNPEMETLQRIYGISFPDSKMMKDWEKFQEEAKSRDHRKIGKEQELFFF 402

Query: 259 AEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRAN 317
            +   G  F+  +G  I+  L+ ++R +  K ++ E+ +P + +  LW+ SGHW  Y  N
Sbjct: 403 HDLSPGSCFFLPRGAFIYNALMDFIREEYHKRNFTEVLSPNMYNSKLWETSGHWQHYSNN 462

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           MF      DT      FALKPMNCPGH  +F H  +S+RE+PVR A+FG ++RNE SG+L
Sbjct: 463 MFTFDVEKDT------FALKPMNCPGHCLMFAHRPRSWREMPVRFADFGVLHRNELSGTL 516

Query: 378 HGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGS 437
            GL RVR F QDDAH+FC  EQ+  E     + + S+Y  FGF    + LSTRPE  +G 
Sbjct: 517 SGLTRVRRFQQDDAHIFCMVEQIEEEIKGCLHFLQSVYSTFGF-SFQLNLSTRPEHFLGE 575

Query: 438 DALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ 497
             +WD+AE  ++  L  ++     +IN     G+GAFYGPK +  +KDAIGR  QC TIQ
Sbjct: 576 IEIWDEAERQLQNSL--VEFGKPWKINP----GDGAFYGPKIDIKIKDAIGRYHQCATIQ 629

Query: 498 VDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI 556
           +DF LP RFN  YV+    +K  PV+IHRA+ GS+ER I I+ EN+ G  PLWLSP Q +
Sbjct: 630 LDFQLPIRFNLTYVSKDGDDKNRPVIIHRAILGSVERMIAILSENYGGKWPLWLSPRQVM 689

Query: 557 VTTITSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEAS 615
           V  +  +   YA +++          + D  +  T+N KIR   + +   I++ G+KE  
Sbjct: 690 VIPVGPACENYALQVSKECFEEGFMADVDLDDSCTLNKKIRNAQLAQYNFILVVGEKEKI 749

Query: 616 ERSIGIRRFGSTTTQKVSLLDAIPIL 641
             ++ +R   +    ++S+   I  L
Sbjct: 750 NNAVNVRTRDNKIHGEISIASVIEKL 775


>gi|150865919|ref|XP_001385328.2| threonyl-tRNA synthetase [Scheffersomyces stipitis CBS 6054]
 gi|149387175|gb|ABN67299.2| threonyl-tRNA synthetase [Scheffersomyces stipitis CBS 6054]
          Length = 730

 Score =  423 bits (1087), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 240/659 (36%), Positives = 365/659 (55%), Gaps = 42/659 (6%)

Query: 5   IKLTFPDGSIKNFPVHATGS-DVAESISRSLAKKAVAVAING-KVCDLSDPVREG-SIEI 61
           IK+T  DG++K    + T   D+A SI +S  ++ V   ING ++ DL  P+ +  +++ 
Sbjct: 78  IKITLKDGTVKEGVAYDTTPLDIATSIGKSFLERQVIAKINGSQLWDLPRPLEDDVTLDF 137

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD---KEQPFSSDE 118
           +  + P   AV  HS AHI+ EA +  +    ++ GP  EDGF+YD      E   S  +
Sbjct: 138 LDFDHPEGKAVFWHSSAHILGEACECHYGS-HLSHGPPTEDGFFYDMSINGGETSVSQSD 196

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVE-ILESIPAKENVTLYRQG 177
            + +E+   + I     F +  +S E   ++F   K  YKV+ I + IP   + T+YR G
Sbjct: 197 FSNLEQVATKAIKEKQKFERLEMSKEDLLKMFHYNK--YKVKFISDKIPDGTSTTVYRCG 254

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
              DLC GPH+  +G++K F K++K + +Y+ GDS    L R+YG ++  ++ +T +L F
Sbjct: 255 PLIDLCVGPHIPHSGRIKAF-KVLKNSSSYFLGDSANDSLQRVYGISFPDKKLMTDHLKF 313

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINT 296
           L E+ +RDHR++ +E +LF   E   G  FW   G +I+  L+ ++R + +   ++E+ T
Sbjct: 314 LAEAAERDHRRIGKEQELFFFNEMSPGSAFWLPHGTRIYNALVQFIRDEYQVRGFDEVIT 373

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P + +  LW+ SGHW +Y+ NMF      +T      F LKPMNCPGH  +F    +SYR
Sbjct: 374 PNMFNHKLWETSGHWGNYKENMFTFDVEKET------FGLKPMNCPGHCVIFKSRERSYR 427

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ELP R+A+FG ++RNE SG+L GL RVR F QDDAH+FCT +Q+ +E     + +  +Y 
Sbjct: 428 ELPWRVADFGVLHRNEFSGALSGLTRVRRFQQDDAHIFCTTDQIGSEIKGAFDFLNKVYG 487

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
            FGF+   ++LSTRPEK VG    W+ AE +++  L+  K      +N     G+GAFYG
Sbjct: 488 TFGFQ-FKMELSTRPEKYVGEIETWNSAEKMLEKSLNEFKGEGGWELNP----GDGAFYG 542

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK----CHPVMIHRAVFGSIE 532
           PK + ++ DA+ R +QC TIQ+DF LP+RF   Y    ++K      PVMIHRA+ GS+E
Sbjct: 543 PKIDIMISDALNRWFQCATIQLDFQLPNRFELEYKAETNDKGSSTSRPVMIHRAILGSVE 602

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH-LSIETDFRNETI 591
           R   I+IE++KG  P WLSP Q ++  +     EY Q++   L   +    + D    T+
Sbjct: 603 RMTAILIEHYKGKWPFWLSPRQILIVPVGPKYYEYGQKLQKELNDKYSFYADVDVSGNTL 662

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIR--------------RFGSTTTQKVSLLD 636
             KIR   + K   I I GD+E    S+ +R              +F     Q VSL D
Sbjct: 663 PKKIRTGQLYKYNFIFIVGDEEEQSASVNVRNRDIPEEQGKNAMVKFDEVVKQLVSLRD 721


>gi|149057085|gb|EDM08408.1| threonyl-tRNA synthetase-like 2, isoform CRA_a [Rattus norvegicus]
          Length = 790

 Score =  422 bits (1086), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 236/626 (37%), Positives = 353/626 (56%), Gaps = 22/626 (3%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAH 79
            T   VA  IS+ LA+  V   +NG + DL  P+  + ++E++  ++  + AV  HS AH
Sbjct: 167 TTPYQVAAGISKELAENTVIAKVNGVLWDLDRPLEGDSTVELLMFDNEEAQAVYWHSSAH 226

Query: 80  IMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQIEKKMQEIIARDSPFLK 138
           ++ EA++ ++    +  GP IE+GFYYD F  ++  SS EL+ +E   + II    PF +
Sbjct: 227 VLGEAME-LYYGGHLCYGPPIENGFYYDMFIGDRVVSSTELSALENICKTIIKEKQPFER 285

Query: 139 QYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFF 198
             +S +   E+F+  K  +K  IL+        T+YR G   DLC+GPHVR TG++K   
Sbjct: 286 LEVSKDSLLEMFKYNK--FKCRILKEKVDTPTTTVYRCGPLIDLCKGPHVRHTGKIKAI- 342

Query: 199 KLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI 258
           K+ K +  YW G+     L R+YG ++   + +  +  F EE+  RDHRK+ +E +LF  
Sbjct: 343 KIFKNSSTYWEGNPEMETLQRVYGISFPDSKMMRDWEKFQEEARSRDHRKIGKEQELFFF 402

Query: 259 AEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRAN 317
            +   G  F+  +G  I+ TL+ ++R +  K ++ E+ +P + +  LW+ SGHW  Y  N
Sbjct: 403 HDLSPGSCFFLPRGAFIYNTLMDFIREEYHKRNFTEVLSPNMYNSKLWETSGHWQHYSNN 462

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           MF      DT      FALKPMNCPGH  +F H  +S+RE+PVR A+FG ++RNE SG+L
Sbjct: 463 MFTFDIEKDT------FALKPMNCPGHCLMFAHRPRSWREMPVRFADFGVLHRNELSGTL 516

Query: 378 HGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGS 437
            GL RVR F QDDAH+FC  EQ+  E     + + S+Y  FGF    + LSTRPE  +G 
Sbjct: 517 TGLTRVRRFQQDDAHIFCMVEQIEEEIKGCLHFLQSVYSTFGF-SFQLNLSTRPEHFLGE 575

Query: 438 DALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ 497
             +WD+AE  ++  L         +IN     G+GAFYGPK +  +KDAIGR  QC TIQ
Sbjct: 576 TEIWDEAERQLQNSLTGFGKPW--KINP----GDGAFYGPKIDIKIKDAIGRYHQCATIQ 629

Query: 498 VDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI 556
           +DF LP RFN  YV+    +K  PV+IHRA+ GS+ER I I+ EN+ G  PLWLSP Q +
Sbjct: 630 LDFQLPIRFNLTYVSKDGDDKNRPVIIHRAILGSVERMIAILSENYGGKWPLWLSPRQVM 689

Query: 557 VTTITSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEAS 615
           +  +  +   YA +++          + D  +  T+N KIR   + +   I++ G+KE  
Sbjct: 690 IIPVGPACENYALQVSKECFEEGFMADVDLDDSCTLNKKIRNAQLAQYNFILVVGEKEKL 749

Query: 616 ERSIGIRRFGSTTTQKVSLLDAIPIL 641
             S+ +R   +    ++S+   I  L
Sbjct: 750 NNSVNVRTRDNKIHGEISITSVIEKL 775


>gi|90410628|ref|ZP_01218644.1| threonyl-tRNA synthetase [Photobacterium profundum 3TCK]
 gi|90328869|gb|EAS45153.1| threonyl-tRNA synthetase [Photobacterium profundum 3TCK]
          Length = 426

 Score =  422 bits (1086), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 196/424 (46%), Positives = 288/424 (67%), Gaps = 10/424 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  DVA  I   LAK  +A  +NG+  D  D +  + S+ IIT +
Sbjct: 4   ITLPDGSQRQFDNAVSTMDVAADIGPGLAKACIAGRVNGERVDACDLIENDASLAIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ ++PE ++AIGP I++GFYYD D EQ  + D++  IEK+
Sbjct: 64  DDDGLEIIRHSCAHLLGHAIKQLYPEAKMAIGPTIDNGFYYDIDLEQSLTQDDVDAIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M+E++      +K+ +S ++AR+ FE++ E YK+EIL E++   +   LY   E+ D+CR
Sbjct: 124 MKELVKTKYAVVKKKVSWQEARDAFEARGETYKIEILDENVSRDDRPGLYHHEEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV + G  + F KL+ VAGAYWRG+S+  ML RIYGTA+  ++ L  +L  LEE+ KR
Sbjct: 184 GPHVPNMGFCQHF-KLLSVAGAYWRGNSDNKMLQRIYGTAFQDKKLLKAHLTRLEEASKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ + +DLFH+ ++  G++FWH  GW IF+ L  ++R K+ + +Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKHLDLFHMQQEAPGMVFWHHNGWTIFRELEVFIREKLTEYEYQEVKGPLMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWERSGHWDKYAEAMFT------TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFG+ +RNEPSG+LHG+MRVRGFTQDDAHVFCT+ Q+  E      ++   Y+ FGF+ I
Sbjct: 357 EFGACHRNEPSGALHGIMRVRGFTQDDAHVFCTENQVQQEVTSCIKMVYDTYQTFGFDNI 416

Query: 424 MVKL 427
           ++  
Sbjct: 417 VLSF 420


>gi|193788250|dbj|BAG53144.1| unnamed protein product [Homo sapiens]
          Length = 619

 Score =  422 bits (1086), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 237/599 (39%), Positives = 345/599 (57%), Gaps = 24/599 (4%)

Query: 30  ISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIRHSCAHIMAEAVQSI 88
           +S+ LA   V   +N  V DL  P+ E  ++E++  ED  + AV  HS AHIM EA++ +
Sbjct: 5   LSQGLADNTVIAKVNNVVWDLDRPLEEDCTLELLKFEDEEAQAVYWHSSAHIMGEAMERV 64

Query: 89  WPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKAR 147
           +    +  GP IE+GFYYD + +E   SS++ + +E   ++II     F +  +  E   
Sbjct: 65  YGGC-LCYGPPIENGFYYDMYLEEGGVSSNDFSSLEALCKKIIKEKQAFERLEVKKETLL 123

Query: 148 ELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAY 207
            +F+  K  +K  IL         T+YR G   DLCRGPHVR TG++K   K+ K +  Y
Sbjct: 124 AMFKYNK--FKCRILNEKVNTPTTTVYRCGPLIDLCRGPHVRHTGKIKAL-KIHKNSSTY 180

Query: 208 WRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIF 267
           W G ++   L RIYG ++   + L ++  F EE++ RDHRK+ R+ +L+   E   G  F
Sbjct: 181 WEGKADMETLQRIYGISFPDPKMLKEWEKFQEEAKNRDHRKIGRDQELYFFHELSPGSCF 240

Query: 268 WHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADD 326
           +  KG  I+  LI ++R +  K  ++E+ TP + +  LW  SGHW  Y  NMF+ +   +
Sbjct: 241 FLPKGAYIYNALIEFIRSEYRKRGFQEVVTPNIFNSRLWMTSGHWQHYSENMFSFEVEKE 300

Query: 327 TIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
                  FALKPMNCPGH  +F+H  +S+RELP+RLA+FG ++RNE SG+L GL RVR F
Sbjct: 301 L------FALKPMNCPGHCLMFDHRPRSWRELPLRLADFGVLHRNELSGALTGLTRVRRF 354

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
            QDDAH+FC  EQ+ +E     + + ++Y  FGF    + LSTRPEK +G   +WD AE 
Sbjct: 355 QQDDAHIFCAMEQIEDEIKGCLDFLRTVYSVFGF-SFKLNLSTRPEKFLGDIEVWDQAEK 413

Query: 447 IMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF 506
            ++  L+      +  +N+    G+GAFYGPK +  +KDAIGR  QC TIQ+DF LP RF
Sbjct: 414 QLENSLNEFGEKWE--LNS----GDGAFYGPKIDIQIKDAIGRYHQCATIQLDFQLPIRF 467

Query: 507 NAFYVNSH--SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA 564
           N  YV SH   +K  PV++HRA+ GS+ER I I+ EN+ G  P WLSP Q +V  +  + 
Sbjct: 468 NLTYV-SHDGDDKKRPVIVHRAILGSVERMIAILTENYGGKWPFWLSPRQVMVVPVGPTC 526

Query: 565 VEYAQEIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
            EYAQ++           + D     T+N KIR   + +   I++ G+KE    +I IR
Sbjct: 527 DEYAQKVRQQFHDAKFMADIDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKISGTINIR 585


>gi|291519633|emb|CBK74854.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Butyrivibrio
           fibrisolvens 16/4]
          Length = 588

 Score =  422 bits (1086), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 220/596 (36%), Positives = 360/596 (60%), Gaps = 27/596 (4%)

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE-L 119
           ++  ++  SL ++ HSCAH+MA+AV+ ++P  +  +GP++E+GFYYD D      +DE +
Sbjct: 1   MVNFKEDESLNMLNHSCAHMMAQAVKHLYPNAKFWVGPVVEEGFYYDMDLGDTMLTDEDV 60

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPA-KENVTLYRQGE 178
           A IEK+M+++        ++ +S  +A E+F  K + YK++++ ++    + ++ Y QG+
Sbjct: 61  AAIEKEMKKVAKSGCKIYRREISKAEALEMF--KDDPYKIDLINNMDEDTQTISCYDQGD 118

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + DLCRGPHV +  ++ ++FKL+K +GAYW+GD+   +L+R+YG  + TQ++L ++L  L
Sbjct: 119 FTDLCRGPHVDNV-KLCRYFKLIKHSGAYWKGDAENQVLNRVYGVCFPTQEQLDEHLALL 177

Query: 239 EESEKRDHRKLAREMDLFHIAED--GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
           EE+++RDHRK+ ++M LF +A+D  G G+  +   G+ I+  L +Y+R K +   Y  + 
Sbjct: 178 EEAKERDHRKIGKDMQLF-MADDLIGRGLPMYLPNGYTIWTELENYIRNKERKLGYLHVM 236

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP V    L+Q SGHWD Y+ NMF     +       +F L+PMNCP H+ +F +   SY
Sbjct: 237 TPCVGTVQLYQTSGHWDHYKENMFPAMEVEG-----ESFVLRPMNCPHHMRIFANRPHSY 291

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           +ELP+R+AE    +R E SG+L G+ R R F Q+D+H+FCT+EQ+ +E   + +LI S Y
Sbjct: 292 KELPIRIAEIAHDFRFESSGTLKGIERGRHFCQNDSHIFCTQEQIKSEVKSVCDLIFSTY 351

Query: 416 KDFGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
           +DFG       LS R     +K    D +W+ AE  ++  L  I     + I      GE
Sbjct: 352 EDFGITDYRCVLSLRDPADTKKYHQDDEMWNTAEQALRETLTEIGIEFTEEI------GE 405

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
            AFYGPK +  +K AIG +    T Q+DF LP++F+  Y ++ S K  PV+IHRA+ GS+
Sbjct: 406 AAFYGPKLDVNVKPAIGNEITLSTCQLDFCLPAKFDLTYTDADSNKQTPVVIHRAILGSL 465

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVE---YAQEIANLLKSHHLSIETDFRN 588
           +RF+  ++E  KGNLPLWL+P Q  V  + +   +   YAQ++ + L    + +E D R+
Sbjct: 466 DRFMAYILEETKGNLPLWLAPTQVKVLPVKNDDADLNAYAQKLVDALADADVRVEFDTRS 525

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           E + YK+RE  I+K+P + + G  E +E ++  R  G   T  V   + + ++  E
Sbjct: 526 EKLGYKMREAQIQKVPYLAVLGKNEEAEGTVSYRLHGEHGTTTVKFDEFVELIVNE 581


>gi|332030887|gb|EGI70523.1| Threonyl-tRNA synthetase, cytoplasmic [Acromyrmex echinatior]
          Length = 714

 Score =  422 bits (1086), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 232/624 (37%), Positives = 357/624 (57%), Gaps = 22/624 (3%)

Query: 4   DIKLTFPD-GSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           +I +T PD  +I       T  DVA+SIS+ LA   V   +N ++ DL  P+  +  +++
Sbjct: 75  NITVTLPDEKNISAQSWRTTPYDVAKSISQGLADNTVIAKVNNELWDLDRPLEFDCKLQL 134

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELA 120
           +  +D     V  HS AH++ EA++ ++    +  GP IE+GFYYD +  ++  S+ +  
Sbjct: 135 LKFDDVEGQQVFWHSSAHVLGEAMERVYGGC-LCYGPPIENGFYYDMYLGDKGISNTDFP 193

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            +E   + I+    PF +  ++ E   E+F  K   +KV I+         T YR G   
Sbjct: 194 YLEGLYKNIVKEKQPFERLEMTKEDLLEMF--KYNEFKVRIINERIQTPTTTAYRCGPLI 251

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHVR TG++K   K+ K +  YW G+ N   L R+YG ++   ++L ++  F EE
Sbjct: 252 DLCRGPHVRHTGKIKAM-KITKNSSTYWEGNVNAESLQRLYGISFPDTKQLKEWEKFQEE 310

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQV 299
           + KRDHRK+ +E +L+   E   G  F+  +G  I+ TL+ ++R +  K  ++E+ TP +
Sbjct: 311 AAKRDHRKIGKEQELYFFHELSPGSCFFQPRGAYIYNTLVDFIRSEYRKRGFQEVVTPNI 370

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +  LWQ SGHW  Y  NMF+     +T      FALKPMNCPGH  +F+   +S+RELP
Sbjct: 371 FNSKLWQTSGHWQHYAENMFSFDVEKET------FALKPMNCPGHCMIFDVRCRSWRELP 424

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R A+FG ++RNE SG+L GL+RVR F QDDAH+FC+ +Q+ +E     + +  +Y   G
Sbjct: 425 IRFADFGVLHRNELSGALTGLIRVRRFQQDDAHIFCSIDQIKDEINGALDFLWHVYSILG 484

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F    + LSTRPEK +G   +W++AE  ++  L+         +N      +GAFYGPK 
Sbjct: 485 F-TFSLCLSTRPEKFLGDIKVWNEAEKALEESLNAFGQPWS--LNPE----DGAFYGPKI 537

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +  + DA+ R  Q  TIQ+DF LP RFN  YVN   EK  P++IHRA+ GS+ER I I+ 
Sbjct: 538 DVTILDALKRPHQTATIQLDFQLPIRFNLSYVNEAGEKTRPIIIHRAILGSVERMIAILT 597

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIREH 598
           E++ G  P W+SP QA+V  + S   +YA E+   L    + +E D   ++T+N KIR  
Sbjct: 598 ESYGGKWPYWISPRQAMVVPVASQFDDYAFEVKQKLWDAGVMVEIDIDPSDTLNKKIRNA 657

Query: 599 SIKKIPIIIICGDKEASERSIGIR 622
            + +   I++ G+KE +  ++ IR
Sbjct: 658 QLAQFNFILVVGEKERNAGTVNIR 681


>gi|291521022|emb|CBK79315.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Coprococcus
           catus GD/7]
          Length = 585

 Score =  422 bits (1085), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 217/584 (37%), Positives = 354/584 (60%), Gaps = 25/584 (4%)

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE-L 119
           ++  ++   L ++ HSCAH+MA+A++ ++P+ +  +GP++ +GFYYD D       DE +
Sbjct: 1   MVNFKEDEQLKMLNHSCAHLMAQAIKHLYPQAKFWVGPVVAEGFYYDVDLGDDVIRDEDI 60

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A IEK+M+++       ++  +S E+A E+F  K + YK++++  +    N++ Y QG++
Sbjct: 61  AAIEKEMKKVAKSGKKIVRHEISKEEALEMF--KDDEYKIDLINGLEDG-NISCYTQGDF 117

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV +  ++ + FKL++ +GAYW+GDS   +L RIYG  + T +EL  +L  LE
Sbjct: 118 TDLCRGPHVDNV-KLCRHFKLLRHSGAYWKGDSKNKVLQRIYGVCFPTAEELEAHLQLLE 176

Query: 240 ESEKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           E+++RDHRK+ ++M+LF + +  G G+  +  KG+ I+Q L +Y++ K +   Y+ + TP
Sbjct: 177 EAKERDHRKIGKDMELFMVDDLVGRGLPMFLPKGYTIWQELENYIKEKERKLGYQHVMTP 236

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            V   +L++ SGHWD Y+ NMF     DD       F L+PMNCP H+ ++ +   SYR+
Sbjct: 237 CVGTVNLYKTSGHWDHYKENMFPAMEVDD-----EAFVLRPMNCPHHMMIYANKRHSYRD 291

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+ E    +R E SG+L G+ R R F Q+DAH+F T EQ+ +E  ++ +LI S Y+D
Sbjct: 292 LPIRIGEIAHDFRYEASGTLKGIERGRHFCQNDAHLFVTPEQIKDEISRVVDLIFSTYED 351

Query: 418 FGFEKIMVKLSTR-PEKRV---GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           FG       LS R PE +      D +W+ AEN ++ V++ +     + I      GE A
Sbjct: 352 FGITDYRCVLSLRDPEDKAKYHDDDEMWNKAENALREVMNELGLEYTEEI------GEAA 405

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  +K A+G +    T Q+DF LP++F   YV+   E   PV++HRA+ GS++R
Sbjct: 406 FYGPKLDVNVKPAVGNEITLSTCQLDFCLPAKFQLTYVDKDGEMKTPVVLHRAILGSLDR 465

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVE---YAQEIANLLKSHHLSIETDFRNET 590
           F+  ++E  KGNLP WL+PIQ  V  + +   +   YA EI  LL++ ++ ++ D R E 
Sbjct: 466 FMAYILEETKGNLPTWLAPIQVKVMPVKTDDDDLNAYANEICELLEAQNVRVDLDDRAEK 525

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           + Y++RE  I+K+P +++ G  E   R++  R  G   T  V L
Sbjct: 526 LGYRMREGQIQKVPYLLVIGFNEKDNRTVSYRLHGEKDTTVVGL 569


>gi|119631208|gb|EAX10803.1| threonyl-tRNA synthetase, isoform CRA_a [Homo sapiens]
          Length = 619

 Score =  422 bits (1085), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 236/599 (39%), Positives = 345/599 (57%), Gaps = 24/599 (4%)

Query: 30  ISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIRHSCAHIMAEAVQSI 88
           +S+ LA   V   +N  V DL  P+ E  ++E++  ED  + AV  HS AHIM EA++ +
Sbjct: 5   LSQGLADNTVIAKVNNVVWDLDRPLEEDCTLELLKFEDEEAQAVYWHSSAHIMGEAMERV 64

Query: 89  WPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKAR 147
           +    +  GP IE+GFYYD + +E   SS++ + +E   ++II     F +  +  E   
Sbjct: 65  YGGC-LCYGPPIENGFYYDMYLEEGGVSSNDFSSLEALCKKIIKEKQAFERLEVKKETLL 123

Query: 148 ELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAY 207
            +F+  K  +K  IL         T+YR G   DLCRGPHVR TG++K   K+ K +  Y
Sbjct: 124 AMFKYNK--FKCRILNEKVNTPTTTVYRCGPLIDLCRGPHVRHTGKIKAL-KIHKNSSTY 180

Query: 208 WRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIF 267
           W G ++   L RIYG ++   + L ++  F EE++ RDHRK+ R+ +L+   E   G  F
Sbjct: 181 WEGKADMETLQRIYGISFPDPKMLKEWEKFQEEAKNRDHRKIGRDQELYFFHELSPGSCF 240

Query: 268 WHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADD 326
           +  KG  I+  LI ++R +  K  ++E+ TP + +  LW  SGHW  Y  NMF+ +   +
Sbjct: 241 FLPKGAYIYNALIEFIRSEYRKRGFQEVVTPNIFNSRLWMTSGHWQHYSENMFSFEVEKE 300

Query: 327 TIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
                  FALKPMNCPGH  +F+H  +S+RELP+RLA+FG ++RNE SG+L GL RVR F
Sbjct: 301 L------FALKPMNCPGHCLMFDHRPRSWRELPLRLADFGVLHRNELSGALTGLTRVRRF 354

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
            QDDAH+FC  EQ+ +E     + + ++Y  FGF    + LSTRPEK +G   +WD AE 
Sbjct: 355 QQDDAHIFCAMEQIEDEIKGCLDFLRTVYSVFGF-SFKLNLSTRPEKFLGDIEVWDQAEK 413

Query: 447 IMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF 506
            ++  L+      +  +N+    G+GAFYGPK +  +KDAIGR  QC TIQ+DF LP RF
Sbjct: 414 QLENSLNEFGEKWE--LNS----GDGAFYGPKIDIQIKDAIGRYHQCATIQLDFQLPIRF 467

Query: 507 NAFYVNSH--SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA 564
           N  YV SH   +K  PV++HRA+ GS+ER I I+ EN+ G  P WLSP Q +V  +  + 
Sbjct: 468 NLTYV-SHDGDDKKRPVIVHRAILGSVERMIAILTENYGGKWPFWLSPRQVMVVPVGPTC 526

Query: 565 VEYAQEIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
            EYAQ++           + D     T+N KIR   + +   I++ G+KE    ++ IR
Sbjct: 527 DEYAQKVRQQFHDAKFMADIDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKISGTVNIR 585


>gi|260103159|ref|ZP_05753396.1| threonine-tRNA ligase [Lactobacillus helveticus DSM 20075]
 gi|260083018|gb|EEW67138.1| threonine-tRNA ligase [Lactobacillus helveticus DSM 20075]
          Length = 644

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 232/640 (36%), Positives = 364/640 (56%), Gaps = 22/640 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPE 65
           +T PDGS K+F    T +D+A++I+ SL K AVA  +NG++  L   +   S + IIT +
Sbjct: 5   ITLPDGSKKDFEESLTIADLAQNIATSLGKAAVAGKVNGELKPLDYKLDSDSEVAIITNK 64

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L V+R + A +     +  +PE+++      EDGFY D DK+      EL ++EK 
Sbjct: 65  DEEGLDVLRATAAFVFEAVAKCEYPELRLGEHVADEDGFYVDTDKDDQIKVGELPKLEKA 124

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           MQ++I          ++  +  +L+++ K  +K E+L  +   + V  Y+ G++ D    
Sbjct: 125 MQKVIKNGEKIEHVQIAKSELEDLYKNDK--FKSELLAKVEG-DTVDAYKLGDFVDFGFD 181

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
             + +TG++K+F KL+ VAGAYW G S+ PML RI+GTA+  + +L   L   +E ++RD
Sbjct: 182 ALLPNTGKIKQF-KLLSVAGAYWLGKSSNPMLQRIFGTAFFKEADLKADLKRRQEIKERD 240

Query: 246 HRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQH 303
           HR + R++DLF +  + G+G+ +W  KG  I + +  Y+  R++ D Y+ + TP +++  
Sbjct: 241 HRTIGRDLDLFFVDPKVGAGLPYWMPKGATIRRVVERYIIDREVADGYQHVYTPVLMNLD 300

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
            ++ SGHW  YR +MF        + D     L+PMNCP H+ +F H ++SYR+LP+R+A
Sbjct: 301 AYKTSGHWAHYRDDMFPPM----DMGDGEMLELRPMNCPSHIQIFKHHIRSYRDLPLRVA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           E G ++R E SG+L GL RVR  T +D H F   +Q+  E  KI  LI+ +YKDF     
Sbjct: 357 ELGMMHRYEKSGALSGLQRVREMTLNDGHTFVVLDQVQTEFAKILKLIMEVYKDFDITDY 416

Query: 424 MVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
             +LS R     +K   +D +W+ ++ ++KG +D +     D +      GE AFYGPK 
Sbjct: 417 YFRLSYRDPKNTDKYFANDEMWEKSQKMLKGAMDDL---GLDYVEAE---GEAAFYGPKL 470

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +   K A+G D    TIQ+DF LP RF   YV    E+  PVMIHR + G++ERFI  + 
Sbjct: 471 DIQTKTALGNDETMSTIQLDFMLPDRFGLTYVGKDGEEHRPVMIHRGIVGTMERFIAYLT 530

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           E +KG  P WL+P+QA +  + + A  EYA+++   L      +E D RNE + YKIRE 
Sbjct: 531 EIYKGAFPTWLAPVQAEIIPVNNEAHGEYAEKVRAELAKRGFRVEVDDRNEKMGYKIRES 590

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
             +K+P  ++ GD+E     + +RR+G+      SL D I
Sbjct: 591 QTQKVPYTLVLGDEEMKSGKVNLRRYGTDEEISKSLDDFI 630


>gi|2191162|gb|AAB61048.1| Similar to threonyl-tRNA synthetase; coded for by A. thaliana cDNA
           R65376 [Arabidopsis thaliana]
          Length = 702

 Score =  422 bits (1084), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 235/643 (36%), Positives = 359/643 (55%), Gaps = 58/643 (9%)

Query: 1   MPSD-IKLTFPDGSIKNFPV-HATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EG 57
           +P D IK+T PDG++K       T  D+A  IS+ LA  A+  A++  + D++ P+  + 
Sbjct: 70  LPHDPIKVTLPDGNVKEGKKWETTPMDIAAQISKGLANSALISAVDDVLWDMNRPLEGDC 129

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSS 116
            +E+   +  +    + HS AHI+ +                   GFYYD F  E   S 
Sbjct: 130 KLELFKFDSDKGRDTLWHSSAHILGQ-------------------GFYYDGFYGELGLSD 170

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
           +    IE    +      PF +  ++ ++A E+F      +KVE++  +PA   +T+YR 
Sbjct: 171 NHFPSIEAGAAKAAKEAQPFERIEVTKDQALEMFSENN--FKVELINGLPADMTITVYRC 228

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           G   DLCRGPH+ +T  VK F K ++ + AYW+GD +R  L R+YG ++  Q++L +YL 
Sbjct: 229 GPLVDLCRGPHIPNTSFVKAF-KCLRASSAYWKGDKDRESLQRVYGISYPDQKQLKKYLQ 287

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEIN 295
           FLEE++K DHR L ++ +LF   +   G  F+   G +++  L+ +++ +     Y E+ 
Sbjct: 288 FLEEAKKYDHRLLGQKQELFFSHQLSPGSYFFLPLGTRVYNRLMDFIKNQYWHRGYTEVI 347

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP + +  LWQ SGH D+Y+ NMF          + + F LKPMNCPGH  +F H ++SY
Sbjct: 348 TPNMYNMELWQTSGHADNYKDNMFTFNI------EKQEFGLKPMNCPGHCLIFQHRVRSY 401

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP+RLA+FG ++RNE SG+L GL RVR F QDDAH+FCT EQ+  E   +   I  +Y
Sbjct: 402 RELPMRLADFGVLHRNEASGALSGLTRVRRFQQDDAHIFCTTEQVKGEVQGVLEFIDYVY 461

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL--GEGA 473
           K FGF    +KLSTRPEK +G    WD AE  +K  ++             ++L  G+GA
Sbjct: 462 KVFGF-TYELKLSTRPEKYLGDLETWDKAEADLKEAIEAFGKP--------LVLNEGDGA 512

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFY-VNSHSEKCHPVMIHRAVFGSIE 532
           FYGPK +  + DA+ R +QC T+Q+DF LP RFN  Y     ++K  PVMIHRAV GS+E
Sbjct: 513 FYGPKIDITVSDAMNRKFQCATLQLDFQLPIRFNLEYAAEDEAKKSRPVMIHRAVLGSVE 572

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
           R   I++E++KG  P W+SP QAIV  I+  + +YA+++   +K     ++ D  +  I+
Sbjct: 573 RMFAILLEHYKGKWPFWISPRQAIVCPISEKSQQYAEKVQKQIKDAGFYVDADLTDRKID 632

Query: 593 YK-------------IREHSIKKIPIIIICGDKEASERSIGIR 622
            K             +RE  + +   I++ G+ EA+   + +R
Sbjct: 633 KKVNDFGSCSKFCSVVREAQLAQYNYILVVGETEAATGQVSVR 675


>gi|50310653|ref|XP_455348.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49644484|emb|CAG98056.1| KLLA0F05918p [Kluyveromyces lactis]
          Length = 744

 Score =  422 bits (1084), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 237/639 (37%), Positives = 352/639 (55%), Gaps = 38/639 (5%)

Query: 5   IKLTFPDGSIKNFPVHATGS-DVAESISRSLAKKAVAVAINGKVCDLSDPVR-----EGS 58
           + +   DGS K      T   D+A+ IS+S +++     +NG++ DL  P+      E  
Sbjct: 86  LTVVLKDGSTKEATAWETSPMDIAQQISKSFSERQCISKVNGELWDLERPLEGNEGDELK 145

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF------DKEQ 112
           +E    E      V  HS AH++ EA +       + +GP  +DGF+Y+F      D + 
Sbjct: 146 VEFFDFESDTGKKVFWHSSAHVLGEACECNLG-AHICLGPPTDDGFFYEFACRDSMDADS 204

Query: 113 P---FSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES-IPAK 168
           P    S  +   +E   + +I +   F +  +S E   ++F   K  YK  ++ + IP  
Sbjct: 205 PERTVSQADFPNLESVSKNVIKQKQRFERLVMSKENLLKMFHYSK--YKTYLVSTKIPDG 262

Query: 169 ENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQ 228
              T+YR G   DLC GPH+  TG++K F KL+K +  Y+ GD+N   L RIYG ++  +
Sbjct: 263 GATTVYRCGSLIDLCTGPHIPHTGRIKAF-KLLKNSSCYFLGDNNNDSLQRIYGISFPDK 321

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI- 287
           + +  +L FL E+  RDHRK+ RE +LF+  E   G  FW   G +I+ TL+  +R +  
Sbjct: 322 KLMDAHLKFLAEASMRDHRKIGREQELFYFNEMSPGSCFWLPHGTRIYNTLVDLLRSEYR 381

Query: 288 KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
           K  Y+E+ TP + +  LW+ SGHW +Y+ NMF+ +   +T      F LKPMNCPGH  +
Sbjct: 382 KRGYDEVITPNMYNSKLWETSGHWANYKENMFSFEVEKET------FGLKPMNCPGHCLM 435

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
           F    +SYRELP R+A+FG ++RNE SG+L GL RVR F QDDAH+FCT++Q+ NE   I
Sbjct: 436 FKARERSYRELPWRVADFGVIHRNEFSGALSGLTRVRRFQQDDAHIFCTQDQIENEIANI 495

Query: 408 HNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGV 467
            + +  +Y  FGFE   ++LSTRPEK VG    W++AE+ ++  L           N  +
Sbjct: 496 FDFLKYVYGVFGFE-FKMELSTRPEKYVGELETWNNAESKLETALKKWGG------NWEL 548

Query: 468 LLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC----HPVMI 523
             G+GAFYGPK + ++ DA+ R  QC TIQ+DF LP+RF   +     E       PVMI
Sbjct: 549 NPGDGAFYGPKIDIMISDALKRWHQCATIQLDFQLPNRFELEFKTKELEGSDNYERPVMI 608

Query: 524 HRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIE 583
           HRA+ GS+ER   I+ E+F G  P WLSP Q +V  +     EYAQE+ + +       +
Sbjct: 609 HRAILGSVERMTAILTEHFAGKWPFWLSPRQILVVPVGVKFQEYAQEVRDKMVEAGFYAD 668

Query: 584 TDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
            D    T+  K+R   + K   I I G++E +E+S+ IR
Sbjct: 669 VDLTGNTLQKKVRNGQMLKYNFIFIVGEQEMTEKSVNIR 707


>gi|308805817|ref|XP_003080220.1| putative threonyl-tRNA synthetase (ISS) [Ostreococcus tauri]
 gi|116058680|emb|CAL54387.1| putative threonyl-tRNA synthetase (ISS) [Ostreococcus tauri]
          Length = 673

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 232/646 (35%), Positives = 367/646 (56%), Gaps = 44/646 (6%)

Query: 5   IKLTFPDGSIKNFPVHATGS-DVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           I +T PDG +K     AT   DVA SI + LA+ A+   ++G+  D+  P+  + ++++ 
Sbjct: 52  IAVTLPDGGVKAGVRFATTPYDVAMSIHKKLAQNALVAKVDGEFWDMRRPLEGDCALQMF 111

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQ 121
           T +D        HS AH++ EA++  +    + IGP IE+GFYYD F  E+  + D+ A 
Sbjct: 112 TFDDAEGKECYWHSSAHVLGEALELEYG-ADLTIGPAIEEGFYYDCFLGERTLNPDDTAT 170

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           I+ +M++II     F +  +S  +A E+FE  K  +K+E++  +P    ++ YR G   D
Sbjct: 171 IKARMEKIIGEKQEFQRIVVSRAEALEMFEENK--FKLELIGGLPEDATISCYRCGPMVD 228

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+  TG +K    + + + A+WR D  +  L R+Y   + T + + +Y+  +EE+
Sbjct: 229 LCRGPHLPDTGHLKAV-AVTQCSRAHWRADVTKDPLVRVYAVTFPTDKLMKEYVTRIEEA 287

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
           +KRDHR +    +LF   +   G  F+ + G +I+ +L+ Y++ K  + +Y+E+ TP + 
Sbjct: 288 KKRDHRTIGLNQELFFFHQLSPGSCFFQKYGARIYNSLVGYIKEKYWEYEYDEVITPTL- 346

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
             HL                  C  +       F LKPMNCPGH  +F H  +S+RELP+
Sbjct: 347 --HL-----------------TCRKEE------FGLKPMNCPGHCVMFAHRHRSFRELPM 381

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+A+FG ++RNE SG+L GL RVR F QDDAH+FC ++QM  E L     +  +Y  FG 
Sbjct: 382 RVADFGVLHRNEFSGALSGLTRVRRFQQDDAHIFCREDQMEQELLGFLRFLDDVYTVFGL 441

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD-RINTGVLLGEGAFYGPKF 479
           E  M KLSTRPE  +G   +WD AE  +   L+    S +D ++N G    +GAFYGPK 
Sbjct: 442 EYEM-KLSTRPEGYLGELEVWDKAEAALTAALN---RSGRDWKLNPG----DGAFYGPKI 493

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +  + DA+ R +QC T+Q+DF LP RF+  YV+ ++E   P++IHRA+ GS+ER  GI+ 
Sbjct: 494 DITVFDALKRRFQCATVQLDFQLPIRFDLSYVDENNEPTRPIIIHRAILGSVERMFGILT 553

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAV-EYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           E+F G  P WLSP Q ++  I+ SA  EY  E+  +L+     +E D  +  +  K+RE 
Sbjct: 554 EHFAGKWPFWLSPKQVMIVPISDSASGEYCMEVKRMLRKEGFHVEVDNSDRKMQKKVREA 613

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            +++   I++CG+ E   R++ +R   +    +  + D I +L KE
Sbjct: 614 QLEQFNYILVCGESEKVNRTVNVRTRDNKVHGEHKVEDLITVLNKE 659


>gi|302922168|ref|XP_003053410.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256734351|gb|EEU47697.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 741

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 241/661 (36%), Positives = 361/661 (54%), Gaps = 39/661 (5%)

Query: 4   DIKLTFPDGSIKNFPV-HATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           +I ++ P+G          T   +A+ IS+SL ++ V   ++G++ DL+ P+ +   +E+
Sbjct: 76  EITISLPNGKEHTGTSWETTPFSIAKGISKSLLERTVISIVDGELWDLTRPLEKSCKLEL 135

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIED--GFYYDFDK--EQPFSSD 117
           +  E P    V  HS AHI+ EA +  +    +  GP  ED  GFYYD     EQ  + +
Sbjct: 136 LDFEHPEGKKVFWHSSAHILGEAAERRF-GCYLCNGPPTEDPPGFYYDMANMGEQVIADE 194

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFE-SKKEAYKVEILESIPAKENVTLYRQ 176
           +   +E+    II +  PF +  ++ ++  E+F+ SK + Y +   + +P     T+YR 
Sbjct: 195 DKKALEQLSNSIIKQKQPFERLEMTKDELLEMFKYSKYKEYFIN--QRVPDGTKSTVYRC 252

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           G   DLCRGPHV +TG +K F  +++ + AYW GDSN   + RI G ++  +++L +Y +
Sbjct: 253 GPLIDLCRGPHVPTTGNIKAF-SVLRNSAAYWLGDSNNESVQRIAGISFPDKKQLEEYKH 311

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEIN 295
           FL E+ KR+HRK+ ++  LF   E   G  F+   G +I+  L+  ++ +  K  + E+ 
Sbjct: 312 FLAEAAKRNHRKIGQDQKLFFFDEVSPGSTFFLPHGVRIYNALMDLLKGEYRKRGFTEVM 371

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           +P V    LW+ SGHW  Y  NMF      +       + LKPMNCPGH  +F H   SY
Sbjct: 372 SPNVYKSDLWKISGHWGHYEENMFTFDVEKER------YGLKPMNCPGHCKIFAHSDVSY 425

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           ++LP R+A+FG ++RNE SG+L GL RVR F QDDAH+FCT +Q+ +E     + + ++Y
Sbjct: 426 KDLPWRMADFGVLHRNEFSGALSGLTRVRRFQQDDAHIFCTVDQIRDEIESAFDFLSAVY 485

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
             FGF    +KLSTRPEK VG  A WD AE  ++  L++    +  +       G+GAFY
Sbjct: 486 GLFGF-SFKLKLSTRPEKYVGDIATWDIAEQKLQEALESFAKKTNAKWEFNP--GDGAFY 542

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK----------------CH 519
           GPK +  L DA+ RD QCGTIQ+DFNLP RF   YV    E                   
Sbjct: 543 GPKIDITLYDALRRDHQCGTIQLDFNLPRRFKLRYVAGKDESGVSDGSDPSEDLPAGYSR 602

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH 579
           PVMIHRAV GS ER  G++ E+F G  P WLSP Q +V  +  +  +YA+EI  + +   
Sbjct: 603 PVMIHRAVLGSFERMFGVLAEHFAGKWPFWLSPRQILVVPVMPAVNDYAKEIQQIFQEKE 662

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
           L I+ D  + T   KIR   +++   I + G +EA  R++ IR      TQ    L  +P
Sbjct: 663 LYIDVDLSSNTFQKKIRTGQLEQYNFIFVVGAEEAKSRTVNIRNRDDQATQTKGEL--VP 720

Query: 640 I 640
           I
Sbjct: 721 I 721


>gi|241678425|ref|XP_002412596.1| threonyl-tRNA synthetase, putative [Ixodes scapularis]
 gi|215506398|gb|EEC15892.1| threonyl-tRNA synthetase, putative [Ixodes scapularis]
          Length = 692

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 246/657 (37%), Positives = 361/657 (54%), Gaps = 27/657 (4%)

Query: 5   IKLTFPDGSIKNFPVHATG--SDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           IK+T PDG + +     T   +  AE IS+ LA   V   ++G + DL  P+  + S+++
Sbjct: 52  IKVTLPDGRVLDAQSWKTTPYTLAAEGISKGLADSVVIAKVDGVLWDLDRPLEADCSLQL 111

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD--FDKEQPFSSDEL 119
           +  +DP    V  HS AHIM EA++ I+    +  GP IE GFYYD   D  Q  S+ + 
Sbjct: 112 LKFDDPEGQQVFWHSSAHIMGEALERIYGGC-LCYGPPIEGGFYYDMHLDGGQGVSAVDH 170

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IE+ M+ I+    PF +  L  E+   +F+     +KV IL+        T+YR G  
Sbjct: 171 PSIEQLMRSIVKEKQPFERLELPKEELLRMFQYN--PFKVRILQEKVTTPTTTVYRCGPL 228

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHVR TG+VK   ++ K + AYW G ++   L R+YG ++   ++L ++  F E
Sbjct: 229 IDLCRGPHVRHTGKVKAL-QVTKNSSAYWEGKADAEALQRVYGISFPDAKQLKEWQKFQE 287

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+ KRDHRK+ RE +LF   E   G  F+   G  I+ TL+  ++ +  K  ++E+ TP 
Sbjct: 288 EAAKRDHRKIGREQELFFFHELSPGSCFFQPNGAYIYNTLVDMIKAEYNKRGFQEVVTPN 347

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           + +  LW  SGHW  Y+ NMF+     +T      FALKPMNCPGH  +F+   +S+REL
Sbjct: 348 MYNSKLWLTSGHWQHYQDNMFSFDVEKET------FALKPMNCPGHCLMFDVRPRSWREL 401

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+A+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E       +  IY  F
Sbjct: 402 PLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCASEQIASEMKGALEFLKHIYSIF 461

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF    +KLSTRPE  +G   +W+DAE  ++  L+         +N G    +GAFYGPK
Sbjct: 462 GF-TFKLKLSTRPEGFLGDIEVWNDAEKQLEQSLNDFGYPWT--LNPG----DGAFYGPK 514

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +  + DA+ R  QC TIQ+DF LP RFN  Y++   EK  PV+IHRA+ GS+ER I I+
Sbjct: 515 IDITIMDALRRQHQCATIQLDFQLPIRFNLSYISETGEKKRPVIIHRAILGSVERMIAIL 574

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIRE 597
            EN+ G  P WLSP Q  +  +     +YA E+   L +     + D     T+N KIR 
Sbjct: 575 TENYGGKWPFWLSPRQVTMVPVGPMYDDYALEVKRQLCAAGFRCDADLDPGNTMNKKIRN 634

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT--KESLPPDCQK 652
             + +    I+ G    +  ++ +R   +    + S+ D I   +  K    PD ++
Sbjct: 635 AQLDQYN-FILGGLPAKTSGTVNVRTRDNKVHGEFSVADVIERFSRLKREFVPDSEE 690


>gi|238855713|ref|ZP_04646009.1| threonine--tRNA ligase [Lactobacillus jensenii 269-3]
 gi|260665499|ref|ZP_05866346.1| threonyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
 gi|282934764|ref|ZP_06340004.1| threonine--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|313471817|ref|ZP_07812309.1| threonine--tRNA ligase [Lactobacillus jensenii 1153]
 gi|238831659|gb|EEQ24000.1| threonine--tRNA ligase [Lactobacillus jensenii 269-3]
 gi|239528573|gb|EEQ67574.1| threonine--tRNA ligase [Lactobacillus jensenii 1153]
 gi|260560767|gb|EEX26744.1| threonyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
 gi|281301175|gb|EFA93479.1| threonine--tRNA ligase [Lactobacillus jensenii 208-1]
          Length = 643

 Score =  421 bits (1081), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 229/636 (36%), Positives = 364/636 (57%), Gaps = 23/636 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPE 65
           +T PDGS K+F    +  D+A+ IS SL K AVA  ++G+V  ++  + + S + I+T +
Sbjct: 5   ITLPDGSKKDFDQAVSVLDLAKGISTSLGKAAVAAKVDGEVKSVNFMLEKDSEVAILTDK 64

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   LAV+R + A ++  A Q+ +PE+++      EDGF+ D DKE      EL ++EK 
Sbjct: 65  DEAGLAVLRDTVAFLLEAAAQAKYPELRLGEHEANEDGFFVDTDKEDQIKVTELPELEKA 124

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           + ++I          +   +    F  K + +K+E+L+S    + V  ++ G++ D    
Sbjct: 125 IAKLIKNGQAIEPVMVKKSELEAQF--KNDPFKMELLKS--EGDEVAAFKMGDFVDFGFA 180

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
             + ++G+VK F KL+ VAGAYW+G S+ PML R++GTA+  + +L   L    E ++RD
Sbjct: 181 ALLPNSGKVKHF-KLLSVAGAYWQGKSSNPMLQRLFGTAFFKEADLEADLKRRAEIKERD 239

Query: 246 HRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQH 303
           HR + R++DLF +  + G+G+ +W  KG  I + +  Y+  +++ D Y+ + TP +++  
Sbjct: 240 HRTIGRDLDLFFVDPKVGAGLPYWMPKGATIRRVIERYIIDKELADGYQHVYTPVLMNLD 299

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
            ++ SGHW  YR +MF        + D     L+PMNCP H+ V+ H ++SYRELP+R+A
Sbjct: 300 AYKTSGHWAHYREDMFPPM----DMGDGEMLELRPMNCPSHIQVYKHHIRSYRELPIRIA 355

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           E G ++R E SG+L GL RVR  T +D H F   EQ+  E  KI  LI+ +YKDF     
Sbjct: 356 ELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALEQVQEEFAKILKLIMDVYKDFDITDY 415

Query: 424 MVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
             +LS R     +K   +D +W+ ++ ++KG +D +     D +      GE AFYGPK 
Sbjct: 416 YFRLSYRDPKNTDKYFANDEMWERSQKMLKGAMDDL---GLDYVEAE---GEAAFYGPKL 469

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +   K A+G D    TIQ+DF LP RF+  YV    E+  PVMIHR + G++ERFI  + 
Sbjct: 470 DIQTKTALGNDETMSTIQLDFMLPERFDLSYVGQDGEEHRPVMIHRGIVGTMERFIAYLT 529

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           E +KG  P WL+P Q  +  +   A  EYA+++ + L  H    E DFRNE + YKIRE 
Sbjct: 530 EIYKGAFPTWLAPEQVEIIPVNLDAHGEYAKKVRDELLKHGFRAEVDFRNEKMGYKIRES 589

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
             +K+P  ++ GD E +  ++ +R +G+   + +SL
Sbjct: 590 QTQKVPYTLVLGDDEMNSNAVNVRPYGTEKQESMSL 625


>gi|282934500|ref|ZP_06339755.1| threonine--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|281301447|gb|EFA93736.1| threonine--tRNA ligase [Lactobacillus jensenii 208-1]
          Length = 644

 Score =  421 bits (1081), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 231/636 (36%), Positives = 367/636 (57%), Gaps = 23/636 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPE 65
           +T PDGS KNF    +  D+A+ IS SL K AVA  ++G+V  ++  + + S + I+T +
Sbjct: 6   ITLPDGSKKNFDQAVSVLDLAKGISTSLGKAAVAAKVDGEVKPVNFMLEKDSEVAILTDK 65

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   LAV+R + A ++  A Q+ +PE+++      EDGF+ D DKE      EL ++EK 
Sbjct: 66  DEAGLAVLRDTVAFLLEAAAQAKYPELRLGEHEANEDGFFVDTDKEDQIKITELPELEKA 125

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           + ++I        + +  +K+    E K + +K+E+L+S    + V  ++ G++ D    
Sbjct: 126 IVKLIKNGQAI--EPVMVKKSELEAEFKNDPFKMELLKS--EGDEVAAFKMGDFVDFGFK 181

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
             + ++G+VK F KL+ VAGAYW+G S+ PML R++GTA+  + +L   L    E ++RD
Sbjct: 182 ALLPNSGKVKHF-KLLSVAGAYWQGKSSNPMLQRLFGTAFFKETDLEADLKRRAEIKERD 240

Query: 246 HRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQH 303
           HR + R++DLF +  + G+G+ +W  KG  I + +  Y+  +++ D Y+ + TP +++  
Sbjct: 241 HRTIGRDLDLFFVDPKVGAGLPYWMPKGATIRRVIERYIIDKELADGYQHVYTPVLMNLD 300

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
            ++ SGHW  YR +MF        + D     L+PMNCP H+ V+ H ++SYRELP+R+A
Sbjct: 301 AYKTSGHWAHYREDMFPPM----DMGDGEMLELRPMNCPSHIQVYKHHIRSYRELPIRIA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           E G ++R E SG+L GL RVR  T +D H F   EQ+  E  KI  LI+ +YKDF     
Sbjct: 357 ELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALEQVQEEFAKILKLIMDVYKDFDITDY 416

Query: 424 MVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
             +LS R     +K   +D +W+ ++ ++KG +D +     D +      GE AFYGPK 
Sbjct: 417 YFRLSYRDPKNTDKYFANDEMWERSQKMLKGAMDDL---GLDYVEAE---GEAAFYGPKL 470

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +   K A+G D    TIQ+DF LP RF+  YV    E+  PVMIHR + G++ERFI  + 
Sbjct: 471 DIQTKTALGNDETMSTIQLDFMLPERFDLSYVGQDGEEHRPVMIHRGIVGTMERFIAYLT 530

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           E +KG  P WL+P Q  +  +   A  EYA+++ + L  H    E DFRNE + YKIRE 
Sbjct: 531 EIYKGAFPTWLAPEQVEIIPVNLDAHGEYAKKVRDELLKHGFRAEVDFRNEKMGYKIRES 590

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
             +K+P  ++ GD E +  ++ +R +G+   + +SL
Sbjct: 591 QTQKVPYTLVLGDDEMNSNAVNVRPYGTEKQESMSL 626


>gi|332821648|ref|XP_003310808.1| PREDICTED: threonyl-tRNA synthetase, cytoplasmic [Pan troglodytes]
          Length = 756

 Score =  421 bits (1081), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 234/596 (39%), Positives = 342/596 (57%), Gaps = 22/596 (3%)

Query: 32  RSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWP 90
           + LA   V   +N  V DL  P+ E  S+E++  ED  + AV  HS AHIM EA++ ++ 
Sbjct: 144 QGLADNTVIAKVNNLVWDLDRPLEEDCSLELLKFEDEEAQAVYWHSSAHIMGEAMERVYG 203

Query: 91  EVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKAREL 149
              +  GP IE+GFYYD + +E   SS++ + +E   ++II     F +  +  E    +
Sbjct: 204 GC-LCYGPPIENGFYYDMYLEEGGVSSNDFSSLEALCKKIIKEKQAFERLEVKKETLLAM 262

Query: 150 FESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWR 209
           F+  K  +K  IL         T+YR G   DLCRGPHVR TG++K   K+ K +  YW 
Sbjct: 263 FKYNK--FKCRILNEKVNTPTTTVYRCGPLIDLCRGPHVRHTGKIKAL-KIHKNSSTYWE 319

Query: 210 GDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWH 269
           G ++   L RIYG ++   + L ++  F EE++ RDHRK+ R+ +L+   E   G  F+ 
Sbjct: 320 GKADMETLQRIYGISFPDPKMLKEWEKFQEEAKNRDHRKIGRDQELYFFHELSPGSCFFL 379

Query: 270 RKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTI 328
            KG  I+  LI ++R +  K  ++E+ TP + +  LW  SGHW  Y  NMF+ +   +  
Sbjct: 380 PKGAYIYNALIEFIRSEYRKRGFQEVVTPNIFNSRLWMTSGHWQHYSENMFSFEVEKEL- 438

Query: 329 KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQ 388
                FALKPMNCPGH  +F+H  +S+RELP+RLA+FG ++RNE SG+L GL RVR F Q
Sbjct: 439 -----FALKPMNCPGHCLMFDHRPRSWRELPLRLADFGVLHRNELSGALTGLTRVRRFQQ 493

Query: 389 DDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIM 448
           DDAH+FC  EQ+ +E     + + ++Y  FGF    + LSTRPEK +G   +WD AE  +
Sbjct: 494 DDAHIFCAMEQIEDEIKGCLDFLRTVYSVFGF-SFKLNLSTRPEKFLGDIEVWDQAEKQL 552

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
           +  L+      +  +N+    G+GAFYGPK +  +KDAIGR  QC TIQ+DF LP RFN 
Sbjct: 553 ENSLNEFGEKWE--LNS----GDGAFYGPKIDIQIKDAIGRYHQCATIQLDFQLPIRFNL 606

Query: 509 FYVNSHS-EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEY 567
            YV+    +K  PV++HRA+ GS+ER I I+ EN+ G  P WLSP Q +V  +  +  EY
Sbjct: 607 TYVSHDGDDKKRPVIVHRAILGSVERMIAILTENYGGKWPFWLSPRQVMVVPVGPTCDEY 666

Query: 568 AQEIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           AQ++           + D     T+N KIR   + +   I++ G+KE    ++ IR
Sbjct: 667 AQKVRQQFHDAKFMADIDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKISGTVNIR 722


>gi|315604309|ref|ZP_07879375.1| threonine--tRNA ligase [Actinomyces sp. oral taxon 180 str. F0310]
 gi|315314015|gb|EFU62066.1| threonine--tRNA ligase [Actinomyces sp. oral taxon 180 str. F0310]
          Length = 677

 Score =  421 bits (1081), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 246/659 (37%), Positives = 356/659 (54%), Gaps = 48/659 (7%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
           MP DI L   DG  +  P   TG+   E  +RS+    VA+ +NG   DL+  + EG+ +
Sbjct: 1   MP-DISLVI-DGQPETVPAGTTGTAWFEK-NRSV----VAIKVNGVARDLASALEEGTTV 53

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           E IT E    L ++RHS  H++A+AVQ ++P+V + IGP I DGFYYDF      + + L
Sbjct: 54  EAITLESEDGLNILRHSATHVLAQAVQDVFPDVNLGIGPFITDGFYYDFGNIDAVTPELL 113

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIP----------AKE 169
            ++EK+M+ II     F+++ +  + AR   E   + YK+E++ +               
Sbjct: 114 RELEKRMKRIIKEGQRFVRREIGEDDAR--VELADQPYKLELVTTKGKGAEGASVEVGAG 171

Query: 170 NVTLY----RQG--EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
           ++T+Y    R G   W DLCRGPH+ ST  +   F L K + AYW+GD N   L RIYGT
Sbjct: 172 SLTMYDNVRRDGTVAWKDLCRGPHLPSTNLIGNGFALTKSSAAYWKGDQNGDQLQRIYGT 231

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISY 282
           AW ++++L  Y   ++E+E+RDHR+L  E+DLF   E+ G G++ +H KG  +   + SY
Sbjct: 232 AWASKEDLVAYQERIKEAERRDHRRLGVELDLFSFPEEIGPGLVVFHPKGGILRHEIESY 291

Query: 283 MR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD-------DTIKDLRTF 334
           +  R  +  ++ ++TP++    L+  SGH   Y   MF     D       +  K  + +
Sbjct: 292 VTDRHKRAGFDFVHTPEISKGGLFHTSGHLPYYADTMFPPMLVDEERDADGNVTKAGQEY 351

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
            LK MNCP H  +F    +SYRELP+R  E G  YR E SG +HGL R+RGFTQDD+H +
Sbjct: 352 YLKAMNCPMHNLIFRSRGRSYRELPLRFYELGHDYRYEKSGVVHGLTRMRGFTQDDSHTY 411

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE------KRVGSDALWDDAENIM 448
           CT EQ   E        +SI   FG +   ++LSTR E      K +GSD  W  A    
Sbjct: 412 CTPEQASQEIRTQIEFFLSILSAFGLKDFYLELSTRDEDGKKKDKFIGSDEDWAAA---T 468

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
           K + D    +  D +      G  AFYGPK    +KDAIGR WQ  TIQ DFN P RF+ 
Sbjct: 469 KALQDACAATGLDLVPD---PGGAAFYGPKVSVQVKDAIGRTWQMSTIQYDFNQPERFDL 525

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYA 568
            Y  +   +  PVMIH A  GS+ERFIG++ E++ G  P WLSP+Q  +  +  +   Y 
Sbjct: 526 EYTAADGTRQRPVMIHSAKLGSVERFIGVLTEHYAGAFPAWLSPVQVRLIPVAEAFDGYV 585

Query: 569 QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR-RFGS 626
            ++A  L+   + +ETD  ++    KIR  S  KIP  +I G ++    ++  R R GS
Sbjct: 586 ADVAAKLRERGVRVETDLSDDRFGKKIRNASKDKIPFTLIAGGEDVEAGAVSFRLRDGS 644


>gi|154482657|ref|ZP_02025105.1| hypothetical protein EUBVEN_00330 [Eubacterium ventriosum ATCC
           27560]
 gi|149736433|gb|EDM52319.1| hypothetical protein EUBVEN_00330 [Eubacterium ventriosum ATCC
           27560]
          Length = 667

 Score =  420 bits (1080), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 232/633 (36%), Positives = 365/633 (57%), Gaps = 23/633 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K+T  DGS+K +    + +D+A  I+  L + A A  ++G+V DL   + ++ ++ I+T
Sbjct: 15  MKVTLKDGSVKEYSEPMSVNDIAFDIAGGLGRAACAGEVDGEVVDLRTTIDKDCTLNILT 74

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D    A  RH+ +H+MAEAV++++PE ++AIGP I+ GFYYDF+ E PFS ++L +IE
Sbjct: 75  FKDEAGKAAYRHTASHVMAEAVKNLFPEAKLAIGPSIDTGFYYDFEHE-PFSREDLDKIE 133

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M++II + +   +  L  E A +  E + E YKVE+++ +P    ++ Y QGE+ DLC
Sbjct: 134 AEMKKIIKKGARLERFTLPREDAIKYMEDRNEPYKVELIKDLPEGSTISFYSQGEFVDLC 193

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+ +T  +K F K++  + AYWRGDS++  L RIY TA++++ EL +YL  LE+++ 
Sbjct: 194 AGPHLMNTKSIKAF-KIISSSMAYWRGDSSKARLQRIYATAFDSKDELNKYLEELEDAKN 252

Query: 244 RDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKDD---YEEINTPQV 299
           RDH KL REM+LF   +  G G+     KG ++ Q L  ++   ++D+   Y    TP +
Sbjct: 253 RDHNKLGREMELFTTVDVIGQGLPLLMPKGQRMIQKLQRWIE-DLEDNEWGYVRTKTPLM 311

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHWD Y+  MF +    D  KD   FAL+PM CP    V+    KSYR+LP
Sbjct: 312 AKSDLYKISGHWDHYKDGMFVL---GDEEKDKEVFALRPMTCPFQYYVYKASQKSYRDLP 368

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
            R  E  +++RNE SG +HGL RVR FT  + H+    +QM  E      L     +  G
Sbjct: 369 CRYGETSTLFRNEDSGEMHGLTRVRQFTISEGHLIVRPDQMVEEFKNCIALAQYCLQTLG 428

Query: 420 FEK-IMVKLST-RPEKR---VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            E+ +   LS   PE R   +G   +W++ E  ++ VL+ +     + I      GE AF
Sbjct: 429 LEEDVTYHLSKWDPENREKYIGEPEVWNETEQDIRNVLNELNIPFVEDI------GEAAF 482

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +   K+  G++    TIQ D  L  +F+ +Y++ + EK  P +IHR   G  ER 
Sbjct: 483 YGPKVDINAKNVYGKEDTMITIQWDALLAEQFDMYYIDENGEKKRPYIIHRTSIGCYERT 542

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
           +  +IE + G  P WL P Q  V  I+   VEYA ++A  LK + + +  D R+E I YK
Sbjct: 543 LAWLIEKYAGKFPTWLCPEQVRVLPISDKYVEYADKVAAELKKNGIDVTVDSRSEKIGYK 602

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIR-RFGS 626
           IRE  + K+P +++ G +E ++ ++ +R RF  
Sbjct: 603 IREARLDKLPYMLVVGQQEEADETVSVRSRFAG 635


>gi|161507864|ref|YP_001577828.1| theronyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
 gi|172048343|sp|A8YWE1|SYT_LACH4 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|160348853|gb|ABX27527.1| Theronyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
          Length = 644

 Score =  420 bits (1080), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 232/640 (36%), Positives = 363/640 (56%), Gaps = 22/640 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPE 65
           +T PDGS K+F    T +D+A++I+ SL K AVA  +NG++  L   +   S + IIT +
Sbjct: 5   ITLPDGSKKDFEESLTIADLAQNIATSLGKAAVAGKVNGELKPLDYKLDSDSEVAIITNK 64

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L V+R + A +     +  +PE+++      E GFY D DK+      EL ++EK 
Sbjct: 65  DEEGLDVLRATAAFVFEAVAKCEYPELRLGEHVADEGGFYVDTDKDDQIKVGELPKLEKA 124

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           MQ++I          ++  +  EL+++ K  +K E+L  +   + V  Y+ G++ D    
Sbjct: 125 MQKVIKNGEKIEHVQIAKSELEELYKNDK--FKSELLAKVEG-DTVDAYKLGDFVDFGFD 181

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
             + +TG++K+F KL+ VAGAYW G S+ PML RI+GTA+  + +L   L   +E ++RD
Sbjct: 182 ALLPNTGKIKQF-KLLSVAGAYWLGKSSNPMLQRIFGTAFFKEADLKADLKRRQEIKERD 240

Query: 246 HRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQH 303
           HR + R++DLF +  + G+G+ +W  KG  I + +  Y+  R++ D Y+ + TP +++  
Sbjct: 241 HRTIGRDLDLFFVDPKVGAGLPYWMPKGATIRRAVERYIIDREVADGYQHVYTPVLMNLD 300

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
            ++ SGHW  YR +MF        + D     L+PMNCP H+ +F H ++SYR+LP+R+A
Sbjct: 301 AYKTSGHWAHYRDDMFPPM----DMGDGEMLELRPMNCPSHIQIFKHHIRSYRDLPLRVA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           E G ++R E SG+L GL RVR  T +D H F   +Q+  E  KI  LI+ +YKDF     
Sbjct: 357 ELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQVQTEFAKILKLIMEVYKDFDITDY 416

Query: 424 MVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
             +LS R     +K   +D +W+ ++ ++KG +D +     D +      GE AFYGPK 
Sbjct: 417 YFRLSYRDPKNTDKYFANDEMWEKSQKMLKGAMDDL---GLDYVEAE---GEAAFYGPKL 470

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +   K A+G D    TIQ+DF LP RF   YV    E+  PVMIHR + G++ERFI  + 
Sbjct: 471 DIQTKTALGNDETMSTIQLDFMLPDRFGLTYVGKDGEEHRPVMIHRGIVGTMERFIAYLT 530

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           E +KG  P WL+P+QA +  + + A  EYA+++   L      +E D RNE + YKIRE 
Sbjct: 531 EIYKGAFPTWLAPVQAEIIPVNNEAHGEYAEKVRAELAKRGFRVEVDDRNEKMGYKIRES 590

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
             +K+P  ++ GD+E     + +RR+G+      SL D I
Sbjct: 591 QTQKVPYTLVLGDEEMKSGKVNLRRYGTDEEISKSLDDFI 630


>gi|256850831|ref|ZP_05556220.1| threonyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260661042|ref|ZP_05861956.1| threonyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
 gi|256615893|gb|EEU21081.1| threonyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260547979|gb|EEX23955.1| threonyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
          Length = 643

 Score =  420 bits (1080), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 231/636 (36%), Positives = 367/636 (57%), Gaps = 23/636 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPE 65
           +T PDGS KNF    +  D+A+ IS SL K AVA  ++G+V  ++  + + S + I+T +
Sbjct: 5   ITLPDGSKKNFDQAVSVLDLAKGISTSLGKAAVAAKVDGEVKPVNFMLEKDSEVAILTDK 64

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   LAV+R + A ++  A Q+ +PE+++      EDGF+ D DKE      EL ++EK 
Sbjct: 65  DEAGLAVLRDTVAFLLEAAAQAKYPELRLGEHEANEDGFFVDTDKEDQIKITELPELEKA 124

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           + ++I        + +  +K+    E K + +K+E+L+S    + V  ++ G++ D    
Sbjct: 125 IVKLIKNGQAI--EPVMVKKSELEAEFKNDPFKMELLKS--EGDEVAAFKMGDFVDFGFK 180

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
             + ++G+VK F KL+ VAGAYW+G S+ PML R++GTA+  + +L   L    E ++RD
Sbjct: 181 ALLPNSGKVKHF-KLLSVAGAYWQGKSSNPMLQRLFGTAFFKETDLEADLKRRAEIKERD 239

Query: 246 HRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQH 303
           HR + R++DLF +  + G+G+ +W  KG  I + +  Y+  +++ D Y+ + TP +++  
Sbjct: 240 HRTIGRDLDLFFVDPKVGAGLPYWMPKGATIRRVIERYIIDKELADGYQHVYTPVLMNLD 299

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
            ++ SGHW  YR +MF        + D     L+PMNCP H+ V+ H ++SYRELP+R+A
Sbjct: 300 AYKTSGHWAHYREDMFPPM----DMGDGEMLELRPMNCPSHIQVYKHHIRSYRELPIRIA 355

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           E G ++R E SG+L GL RVR  T +D H F   EQ+  E  KI  LI+ +YKDF     
Sbjct: 356 ELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALEQVQEEFAKILKLIMDVYKDFDITDY 415

Query: 424 MVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
             +LS R     +K   +D +W+ ++ ++KG +D +     D +      GE AFYGPK 
Sbjct: 416 YFRLSYRDPKNTDKYFANDEMWERSQKMLKGAMDDL---GLDYVEAE---GEAAFYGPKL 469

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +   K A+G D    TIQ+DF LP RF+  YV    E+  PVMIHR + G++ERFI  + 
Sbjct: 470 DIQTKTALGNDETMSTIQLDFMLPERFDLSYVGQDGEEHRPVMIHRGIVGTMERFIAYLT 529

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           E +KG  P WL+P Q  +  +   A  EYA+++ + L  H    E DFRNE + YKIRE 
Sbjct: 530 EIYKGAFPTWLAPEQVEIIPVNLDAHGEYAKKVRDELLKHGFRAEVDFRNEKMGYKIRES 589

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
             +K+P  ++ GD E +  ++ +R +G+   + +SL
Sbjct: 590 QTQKVPYTLVLGDDEMNSNAVNVRPYGTEKQESMSL 625


>gi|331001642|ref|ZP_08325165.1| threonyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str.
           F0167]
 gi|330413363|gb|EGG92730.1| threonyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str.
           F0167]
          Length = 651

 Score =  420 bits (1080), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 238/656 (36%), Positives = 370/656 (56%), Gaps = 34/656 (5%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K+T  DGSIK +    +  D+A+ IS  LA+  VA  +NG   DL D +  +  + +IT
Sbjct: 1   MKITLKDGSIKEYESKKSIIDIAKDISEGLARNVVAGEVNGVKHDLRDEIDSDCELNLIT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D  +L+VIRHS +H++AEAV+ ++PE ++AIGP I +GFYYDFD E PFS ++L ++E
Sbjct: 61  IKDKEALSVIRHSASHVLAEAVKRVFPEAKLAIGPSIAEGFYYDFDHE-PFSREDLDKLE 119

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M++II   +   K  L  E+A +  + K E YKVE+++ +P  E ++ Y+QG++ DLC
Sbjct: 120 AEMKKIIKEGAHIEKFELPREEAIKFMKEKGEPYKVELIQDLPEDEKISFYKQGDFTDLC 179

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH++ T  +K F KL+  + AYWRGDSN+  L RIYGTA+N+++EL  +L  LE+ + 
Sbjct: 180 AGPHLQRTKDIKAF-KLISSSMAYWRGDSNKAKLQRIYGTAYNSKEELEAHLKHLEDIKL 238

Query: 244 RDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKDD---YEEINTPQV 299
           RDH KL REM+LF   +  G G+     KG K+ Q L  ++   ++D+   Y    TP +
Sbjct: 239 RDHNKLGREMELFTTVDVIGQGLPLMLPKGTKMIQKLQRWIE-DLEDNEWGYVRTKTPLM 297

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHWD Y+  MF +    D   D    AL+PM CP    V+ +  KSYR+LP
Sbjct: 298 AKSDLYKISGHWDHYQDGMFIL---GDPQNDGEILALRPMTCPFQYYVYKNTQKSYRDLP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
            R+ E  +++RNE SG +HGL RVR FT  + H     +Q   E     NL I +    G
Sbjct: 355 YRMGETSTLFRNEDSGEMHGLTRVRQFTISEGHNVIRPDQAEEELQNCLNLAIYVLDILG 414

Query: 420 F-EKIMVKLS----TRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL----G 470
             + +  +LS        K +G DA W+  +  ++ +L          +  G+      G
Sbjct: 415 LRDDVTFRLSKWDKNNKGKYLGDDAYWEGTQAALRNIL----------VEKGLPFTEADG 464

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           E AFYGPK +   K+  G++    TIQ+D  +   F+ +Y++    K  P ++HR   G 
Sbjct: 465 EAAFYGPKIDIQAKNVYGKEDTMITIQLDAAIAENFDLYYIDQSGAKVRPYIVHRTSLGC 524

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
            ER +  +IE + G  P WL   Q  +  I+    EYA  +   LK + +    D R E 
Sbjct: 525 YERTLAWLIEKYAGKFPTWLCAEQVRILPISDKYAEYANIVLKELKKNGVDATVDTRTEK 584

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIR-RF-GSTTTQKVSLLDAIPILTKE 644
           I +KIR+  + ++P +++ G+KE +E S+ +R RF G   ++K+S  D + ++ KE
Sbjct: 585 IGFKIRDARLSRLPYMLVVGEKEEAEGSVSVRSRFAGDEGSKKLS--DFVDMICKE 638


>gi|24657723|gb|AAH39225.1| Threonyl-tRNA synthetase-like 2 [Mus musculus]
          Length = 790

 Score =  420 bits (1080), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 236/626 (37%), Positives = 355/626 (56%), Gaps = 22/626 (3%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAH 79
            T   VA  IS+ LA+  V   +NG + DL  P+  + ++E++  ++  + AV  HS AH
Sbjct: 167 TTPYQVAAGISKELAEHTVIAKVNGVLWDLDRPLEGDSTVELLMFDNEEAQAVYWHSSAH 226

Query: 80  IMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQIEKKMQEIIARDSPFLK 138
           I+ EA++ ++    +  GP IE+GFYYD F +++  SS EL+ +E   + II    PF +
Sbjct: 227 ILGEAME-LYYGGHLCYGPPIENGFYYDMFIEDRVVSSTELSALENICKTIIKEKQPFER 285

Query: 139 QYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFF 198
             +S +   E+F+  K  +K  IL+        T+YR G   DLC+GPHVR TG++K   
Sbjct: 286 LEVSKDTLLEMFKYNK--FKCRILKEKVDTPTTTVYRCGPLIDLCKGPHVRHTGKIKAI- 342

Query: 199 KLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI 258
           K+ K +  YW G+     L RIYG ++   + +  +    EE++ RDHRK+ +E +LF  
Sbjct: 343 KIFKNSSTYWEGNPEMETLQRIYGISFPDSKMMKDWEKIQEEAKSRDHRKIGKEQELFFF 402

Query: 259 AEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRAN 317
            +   G  F+  +G  I+  L+ ++R +  K ++ E+ +P + +  LW+ SGHW  Y  N
Sbjct: 403 HDLSPGSCFFLPRGAFIYNALMDFIREEYHKRNFTEVLSPNMYNSKLWETSGHWQHYSNN 462

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           MF      DT      FALKPMNCPGH  +F H  +S+RE+PVR A+FG ++RNE SG+L
Sbjct: 463 MFTFDVEKDT------FALKPMNCPGHCLMFAHRPRSWREMPVRFADFGVLHRNELSGTL 516

Query: 378 HGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGS 437
            GL RVR F QDDAH+FC  EQ+  E     + + S+Y  FGF    + LSTRPE  +G 
Sbjct: 517 SGLTRVRRFQQDDAHIFCMVEQIEEEIKGCLHFLQSVYSTFGF-SFQLNLSTRPEHFLGE 575

Query: 438 DALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ 497
             +WD+AE  ++  L  ++     +IN     G+GAFYGPK +  +KDAIGR  QC TIQ
Sbjct: 576 IEIWDEAERQLQNSL--VEFGKPWKINP----GDGAFYGPKIDIKIKDAIGRYHQCATIQ 629

Query: 498 VDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI 556
           +DF LP RFN  YV+    +K  PV+IHRA+ GS+ER I I+ EN+ G  PLWLSP Q +
Sbjct: 630 LDFQLPIRFNLTYVSKDGDDKNRPVIIHRAILGSVERMIAILSENYGGKWPLWLSPRQVM 689

Query: 557 VTTITSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEAS 615
           V  +  +   YA +++          + D  +  T+N KIR   + +   I++ G+KE  
Sbjct: 690 VIPVGPACENYALQVSKECFEEGFMADVDLDDSCTLNKKIRNAQLAQYNFILVVGEKEKI 749

Query: 616 ERSIGIRRFGSTTTQKVSLLDAIPIL 641
             ++ +R   +    ++S+   I  L
Sbjct: 750 NNAVNVRTRDNKIHGEISIASVIEKL 775


>gi|297205704|ref|ZP_06923099.1| threonine--tRNA ligase [Lactobacillus jensenii JV-V16]
 gi|297148830|gb|EFH29128.1| threonine--tRNA ligase [Lactobacillus jensenii JV-V16]
          Length = 656

 Score =  420 bits (1080), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 231/636 (36%), Positives = 367/636 (57%), Gaps = 23/636 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPE 65
           +T PDGS KNF    +  D+A+ IS SL K AVA  ++G+V  ++  + + S + I+T +
Sbjct: 18  ITLPDGSKKNFDQAVSVLDLAKGISTSLGKAAVAAKVDGEVKPVNFMLEKDSEVAILTDK 77

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   LAV+R + A ++  A Q+ +PE+++      EDGF+ D DKE      EL ++EK 
Sbjct: 78  DEAGLAVLRDTVAFLLEAAAQAKYPELRLGEHEANEDGFFVDTDKEDQIKITELPELEKA 137

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           + ++I        + +  +K+    E K + +K+E+L+S    + V  ++ G++ D    
Sbjct: 138 IVKLIKNGQAI--EPVMVKKSELEAEFKNDPFKMELLKS--EGDEVAAFKMGDFVDFGFK 193

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
             + ++G+VK F KL+ VAGAYW+G S+ PML R++GTA+  + +L   L    E ++RD
Sbjct: 194 ALLPNSGKVKHF-KLLSVAGAYWQGKSSNPMLQRLFGTAFFKETDLEADLKRRAEIKERD 252

Query: 246 HRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQH 303
           HR + R++DLF +  + G+G+ +W  KG  I + +  Y+  +++ D Y+ + TP +++  
Sbjct: 253 HRTIGRDLDLFFVDPKVGAGLPYWMPKGATIRRVIERYIIDKELADGYQHVYTPVLMNLD 312

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
            ++ SGHW  YR +MF        + D     L+PMNCP H+ V+ H ++SYRELP+R+A
Sbjct: 313 AYKTSGHWAHYREDMFPPM----DMGDGEMLELRPMNCPSHIQVYKHHIRSYRELPIRIA 368

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           E G ++R E SG+L GL RVR  T +D H F   EQ+  E  KI  LI+ +YKDF     
Sbjct: 369 ELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALEQVQEEFAKILKLIMDVYKDFDITDY 428

Query: 424 MVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
             +LS R     +K   +D +W+ ++ ++KG +D +     D +      GE AFYGPK 
Sbjct: 429 YFRLSYRDPKNTDKYFANDEMWERSQKMLKGAMDDL---GLDYVEAE---GEAAFYGPKL 482

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +   K A+G D    TIQ+DF LP RF+  YV    E+  PVMIHR + G++ERFI  + 
Sbjct: 483 DIQTKTALGNDETMSTIQLDFMLPERFDLSYVGQDGEEHRPVMIHRGIVGTMERFIAYLT 542

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           E +KG  P WL+P Q  +  +   A  EYA+++ + L  H    E DFRNE + YKIRE 
Sbjct: 543 EIYKGAFPTWLAPEQVEIIPVNLDAHGEYAKKVRDELLKHGFRAEVDFRNEKMGYKIRES 602

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
             +K+P  ++ GD E +  ++ +R +G+   + +SL
Sbjct: 603 QTQKVPYTLVLGDDEMNSNAVNVRPYGTEKQESMSL 638


>gi|332251678|ref|XP_003274973.1| PREDICTED: threonyl-tRNA synthetase, cytoplasmic isoform 3
           [Nomascus leucogenys]
          Length = 619

 Score =  420 bits (1079), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 236/599 (39%), Positives = 344/599 (57%), Gaps = 24/599 (4%)

Query: 30  ISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSCAHIMAEAVQSI 88
           +S+ LA   V   +N  V DL  P+ E S +E++  ED  + AV  HS AHIM EA++ +
Sbjct: 5   LSQGLADNTVIAKVNNVVWDLDRPLEEDSTLELLKFEDEEAQAVYWHSSAHIMGEAMERV 64

Query: 89  WPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKAR 147
           +    +  GP IE+GFYYD + +E   SS++ + +E   ++II     F +  +  E   
Sbjct: 65  YGGC-LCYGPPIENGFYYDMYLEEGGVSSNDFSSLEALCKKIIKEKQAFERLEVKKETLL 123

Query: 148 ELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAY 207
            +F+  K  +K  IL         T+YR G   DLCRGPHVR TG++K   K+ K +  Y
Sbjct: 124 AMFKYNK--FKCRILNEKVNTPTTTVYRCGPLIDLCRGPHVRHTGKIKAL-KIHKNSSTY 180

Query: 208 WRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIF 267
           W G ++   L RIYG ++   + L ++    EE++ RDHRK+ R+ +L+   E   G  F
Sbjct: 181 WEGKADMETLQRIYGISFPDPKMLKEWEKLQEEAKNRDHRKIGRDQELYFFHELSPGSCF 240

Query: 268 WHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADD 326
           +  KG  I+  LI ++R +  K  ++E+ TP + +  LW  SGHW  Y  NMF+ +   +
Sbjct: 241 FLPKGAYIYNALIEFIRSEYRKRGFQEVVTPNIFNSRLWMTSGHWQHYSDNMFSFEVEKE 300

Query: 327 TIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
                  FALKPMNCPGH  +F+H  +S+RELP+RLA+FG ++RNE SG+L GL RVR F
Sbjct: 301 L------FALKPMNCPGHCLMFDHRPRSWRELPLRLADFGVLHRNELSGALTGLTRVRRF 354

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
            QDDAH+FC  EQ+ +E     + + ++Y  FGF    + LSTRPEK +G   +WD AE 
Sbjct: 355 QQDDAHIFCAMEQIEDEIKGCLDFLRTVYSIFGF-SFKLNLSTRPEKFLGDIEVWDQAEK 413

Query: 447 IMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF 506
            ++  L+      +  +N+    G+GAFYGPK +  +KDAIGR  QC TIQ+DF LP RF
Sbjct: 414 QLENSLNEFGEKWE--LNS----GDGAFYGPKIDIQIKDAIGRYHQCATIQLDFQLPIRF 467

Query: 507 NAFYVNSH--SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA 564
           N  YV SH   +K  PV++HRA+ GS+ER I I+ EN+ G  P WLSP Q +V  +  + 
Sbjct: 468 NLTYV-SHDGDDKKRPVIVHRAILGSVERMIAILTENYGGKWPFWLSPRQVMVVPVGPTC 526

Query: 565 VEYAQEIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
            EYAQ++           + D     T+N KIR   + +   I++ G+KE    ++ IR
Sbjct: 527 DEYAQKVRQQFHDAKFMADIDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKISGTVNIR 585


>gi|328855773|gb|EGG04898.1| hypothetical protein MELLADRAFT_37217 [Melampsora larici-populina
           98AG31]
          Length = 687

 Score =  420 bits (1079), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 234/632 (37%), Positives = 352/632 (55%), Gaps = 29/632 (4%)

Query: 5   IKLTFPDGSIK-NFPVHATGSDVAESISRSLAKKAV--AVAINGK----VCDLSDPVREG 57
           I +  P G  K       T  ++A  +S+SLA++ V   V + G     + DL  P+ + 
Sbjct: 34  ILVQLPTGEPKEGISWETTPMEIARGLSKSLAERIVIAEVTLEGVAKPILWDLLRPLEQS 93

Query: 58  -SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF----DKEQ 112
            S+ ++  E      V  HS AH++ EA +  +    + IGP  +DGF+Y+       ++
Sbjct: 94  CSMRLLDFESEEGKRVFWHSSAHVLGEAAERHY-GCHLCIGPPTDDGFFYEMGMGVSGDR 152

Query: 113 PFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES-IPAKENV 171
              + +   +EK  +  I     F +  +S +   E+F   K  YK  I+ S IP   + 
Sbjct: 153 SVQNADYHPLEKVAESAIKEKQRFERLVISKKSLLEMFAYNK--YKTHIINSKIPDGTST 210

Query: 172 TLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQEL 231
           T+YR G   DLC GPH+ +TG +K F  ++K + +Y+ GDS    L RIYG ++  ++ +
Sbjct: 211 TVYRCGPMIDLCVGPHIPNTGYIKSF-SILKNSASYFLGDSANDSLQRIYGISFPDKKAM 269

Query: 232 TQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDD 290
            +Y  FLEE+ KRDHRK+ ++ +LF   E   G  FW   G +I+ TL+ +++ +  K  
Sbjct: 270 AEYKKFLEEAAKRDHRKIGKDQELFFFHEMSPGSCFWLPHGTRIYNTLVEFLKSEYRKRG 329

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH 350
           Y+E+ +P + +  LW  SGHW++Y  NMF ++   +T      FALKPMNCPGH  +F  
Sbjct: 330 YDEVISPNMYNSKLWNTSGHWENYSENMFKLEIEKET------FALKPMNCPGHCLIFGS 383

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
             +SYRELP+R+A+FG V+RNE SG+L GL RVR F QDDAH FCT +Q+ +E   I + 
Sbjct: 384 KDRSYRELPLRMADFGVVHRNEASGALSGLTRVRRFCQDDAHHFCTTDQIDSEVAGIFDF 443

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
           + ++Y   GF    +KLSTRP+  +G  A+W++AE  +   LD      +  ++ G    
Sbjct: 444 LKTVYGMLGF-TYKLKLSTRPDNYIGDLAVWNEAEKRLSSALDKFVGPGEWDVDPG---- 498

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           +GAFYGPK +  + DA+ R  QC TIQ+DF LP RF   Y     E+  PVMIHRA+ GS
Sbjct: 499 DGAFYGPKIDITISDALKRRHQCATIQLDFQLPERFKLQYRTDQGERKRPVMIHRAIMGS 558

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
           +ERF  I+ E+F G  P WLSP Q +V  + ++   YAQE+A  L    L  + D  + T
Sbjct: 559 VERFTAILTEHFGGKWPFWLSPRQVLVIPVAATHKAYAQEVAQKLWDAGLYADADMTDAT 618

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           +  KIR   +     II+ G +E   RS+ +R
Sbjct: 619 LPKKIRNGEVSSYNFIIVVGSEEVESRSVNVR 650


>gi|194374367|dbj|BAG57079.1| unnamed protein product [Homo sapiens]
          Length = 756

 Score =  420 bits (1079), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 233/596 (39%), Positives = 342/596 (57%), Gaps = 22/596 (3%)

Query: 32  RSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWP 90
           + LA   V   +N  V DL  P+ E  ++E++  ED  + AV  HS AHIM EA++ ++ 
Sbjct: 144 QGLADNTVIAKVNNVVWDLDRPLEEDCTLELLKFEDEEAQAVYWHSSAHIMGEAMERVYG 203

Query: 91  EVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKAREL 149
              +  GP IE+GFYYD + +E   SS++ + +E   ++II     F +  +  E    +
Sbjct: 204 GC-LCYGPPIENGFYYDMYLEEGGVSSNDFSSLEALCKKIIKEKQAFERLEVKKETLLAM 262

Query: 150 FESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWR 209
           F+  K  +K  IL         T+YR G   DLCRGPHVR TG++K   K+ K +  YW 
Sbjct: 263 FKYNK--FKCRILNEKVNTPTTTVYRCGPLIDLCRGPHVRHTGKIKAL-KIHKNSSTYWE 319

Query: 210 GDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWH 269
           G ++   L RIYG ++   + L ++  F EE++ RDHRK+ R+ +L+   E   G  F+ 
Sbjct: 320 GKADMETLQRIYGISFPDPKMLKEWEKFQEEAKNRDHRKIGRDQELYFFHELSPGSCFFL 379

Query: 270 RKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTI 328
            KG  I+  LI ++R +  K  ++E+ TP + +  LW  SGHW  Y  NMF+ +   +  
Sbjct: 380 PKGAYIYNALIEFIRSEYRKRGFQEVVTPNIFNSRLWMTSGHWQHYSENMFSFEVEKEL- 438

Query: 329 KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQ 388
                FALKPMNCPGH  +F+H  +S+RELP+RLA+FG ++RNE SG+L GL RVR F Q
Sbjct: 439 -----FALKPMNCPGHCLMFDHRPRSWRELPLRLADFGVLHRNELSGALTGLTRVRRFQQ 493

Query: 389 DDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIM 448
           DDAH+FC  EQ+ +E     + + ++Y  FGF    + LSTRPEK +G   +WD AE  +
Sbjct: 494 DDAHIFCAMEQIEDEIKGCLDFLRTVYSVFGF-SFKLNLSTRPEKFLGDIEVWDQAEKQL 552

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
           +  L+      +  +N+    G+GAFYGPK +  +KDAIGR  QC TIQ+DF LP RFN 
Sbjct: 553 ENSLNEFGEKWE--LNS----GDGAFYGPKIDIQIKDAIGRYHQCATIQLDFQLPIRFNL 606

Query: 509 FYVNSHS-EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEY 567
            YV+    +K  PV++HRA+ GS+ER I I+ EN+ G  P WLSP Q +V  +  +  EY
Sbjct: 607 TYVSHDGDDKKRPVIVHRAILGSVERMIAILTENYGGKWPFWLSPRQVMVVPVGPTCDEY 666

Query: 568 AQEIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           AQ++           + D     T+N KIR   + +   I++ G+KE    ++ IR
Sbjct: 667 AQKVRQQFHDAKFMADIDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKISGTVNIR 722


>gi|168334535|ref|ZP_02692696.1| threonyl-tRNA synthetase [Epulopiscium sp. 'N.t. morphotype B']
          Length = 635

 Score =  419 bits (1078), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 223/559 (39%), Positives = 328/559 (58%), Gaps = 27/559 (4%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDS 134
           H+ +H++A AV++++P + +AIGP I++GFYYDFD E+ FS +ELA+IE +M++I+    
Sbjct: 55  HTASHVLAHAVKNLYPTISLAIGPAIDNGFYYDFDAEKHFSDEELAKIEAEMKKIVKAKH 114

Query: 135 PFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQV 194
           P +K  L  +KA EL   K E YK+E++  +PA   +T Y+QG++ DLC GPH+ +T QV
Sbjct: 115 PIVKFALPKDKALELM--KDEPYKIELINELPADAEITFYKQGDFVDLCAGPHLSNTKQV 172

Query: 195 KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMD 254
           + F KL   AGAYWRG+    ML RIYGTA+  +  LT+YL  +EE++KRDH KL RE+ 
Sbjct: 173 EAF-KLTSCAGAYWRGNEKNKMLYRIYGTAFPKKAMLTEYLAAVEEAKKRDHNKLGRELK 231

Query: 255 LFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKDDYEE-----INTPQVLDQHLWQQS 308
           LF   E  G G+     KG K+ QTL    +R I+D  EE       TP +    L++ S
Sbjct: 232 LFATDETVGQGLPLIMPKGAKVIQTL----QRWIEDLEEENGYLLTKTPNMAKNDLYKIS 287

Query: 309 GHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV 368
           GHW  Y+  MF +   +   KD    AL+PM CP    ++     SYR+LP+R AE  ++
Sbjct: 288 GHWSHYKDGMFVMGNEE---KDDEIIALRPMTCPFQFMIYKQEQHSYRDLPIRYAETATL 344

Query: 369 YRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK-IMVKL 427
            RNE SG +HGL+RVR FT  D H+ CT +Q+  E   + +LI  I K  G +K I  + 
Sbjct: 345 ARNESSGEMHGLIRVRQFTLADGHIVCTPDQLETEFKNVVDLIKYIMKTLGIDKDISYRF 404

Query: 428 ST----RPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           S       EK + +   W+  E IMK +LD +K   ++  N      E AFYGPK +   
Sbjct: 405 SKWSPEFKEKYIDNPEAWETTETIMKNILDHLKIDYKEAEN------EAAFYGPKLDVQF 458

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           K+  G++    T+Q+DF L  RFN  YV++  EK  P +IHR+  G  ER + ++IE + 
Sbjct: 459 KNVHGKEDTIITVQIDFALAERFNMTYVDADGEKKLPYIIHRSSLGCYERTLAMLIEKYA 518

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P    +  I+    +YA E+A  L+ + + +E D R E I YKIRE   +++
Sbjct: 519 GAFPTWLAPTAVKILPISDKYADYAAEVAATLRKNKILVEIDQRTEKIGYKIREARNERV 578

Query: 604 PIIIICGDKEASERSIGIR 622
           P I++ G  E   +++ +R
Sbjct: 579 PYIVVVGADEMENKTVSVR 597


>gi|321252491|ref|XP_003192424.1| threonine-tRNA ligase [Cryptococcus gattii WM276]
 gi|317458892|gb|ADV20637.1| Threonine-tRNA ligase, putative [Cryptococcus gattii WM276]
          Length = 771

 Score =  419 bits (1078), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 235/636 (36%), Positives = 359/636 (56%), Gaps = 33/636 (5%)

Query: 5   IKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGK-VCDLSDPVREG-SIEI 61
           I +TFPDG +++      T   +A+ IS SLA + +   +N + + DL+ P+    S+ +
Sbjct: 115 ITITFPDGKTVQGTSWETTPLQIAKDISPSLADRVIIAKVNNQQLWDLTRPLEASCSLAL 174

Query: 62  ITPEDP----RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFD--KEQPF 114
           +  + P     +  V  HS AH++ EA +  +    +  GP +E+G F+YD      +  
Sbjct: 175 LDFDSPDNSYEARQVFWHSSAHVLGEACERRYEGCCLGYGPPLEEGGFFYDMGLANGRTI 234

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVE-ILESIPAKENVTL 173
           S D+   IE   +  +    PF +  L  E   E+F+  K  YK   I + +P   + T+
Sbjct: 235 SQDDYKPIEDVCKAAVKEKQPFERLELPKEVLLEMFKYNK--YKQHYIQDKVPDGTSSTV 292

Query: 174 YRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQ 233
           YR G   DLC GPHV  TG++K    + K + +Y+ GD+      R+YG ++    ++ +
Sbjct: 293 YRCGPLIDLCLGPHVPHTGRIKSL-AVTKNSSSYFLGDAKNDTFQRVYGMSFPDNAQMKE 351

Query: 234 YLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYE 292
           Y  +LEE+ KRDHRK+ ++ +LF   +   G  F+   G +I+ TL+++++ +  K  + 
Sbjct: 352 YKKYLEEAAKRDHRKIGKDQELFVFNDLSPGSAFFLPMGMRIYNTLMTFIKEEYFKRGFS 411

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+ +P + + +LW+ SGHW +Y  +MF +K  +D       FALKPMNCPGH  +F+   
Sbjct: 412 EVGSPNIFNANLWKTSGHWQNYAEDMFQLKVDEDQ------FALKPMNCPGHCLIFDARE 465

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
           +SY+ELP+R AEFG ++RNE SG+L GL RVR F QDDAH+FCT +Q+  E       + 
Sbjct: 466 RSYKELPLRFAEFGVLHRNEASGALSGLTRVRRFVQDDAHIFCTPDQVEAELYSAFEFLD 525

Query: 413 SIYKDFGFEKIMVKLSTR-PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
           ++YK FGF    V LSTR P+K +G   LW+ AEN ++ VL+          N  V   +
Sbjct: 526 AVYKPFGF-TYKVGLSTRNPKKWMGELELWNKAENTLREVLEQKVPG-----NWHVNEED 579

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH-----SEKCHPVMIHRA 526
            AFYGPK ++ L DA+ R+WQCGTIQ+DFNLP RFN  Y ++      ++   PVMIHRA
Sbjct: 580 AAFYGPKLDFQLTDALKRNWQCGTIQLDFNLPERFNLKYHSAEQSPDGTQFARPVMIHRA 639

Query: 527 VFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF 586
           + GS+ERFI I+ E+  G  PLWLSP Q +V  +     EYAQ++A   +   L  E D 
Sbjct: 640 ILGSLERFIAIITESTGGKWPLWLSPRQVVVIPVAKPFTEYAQKVAKTFQEAGLYAEVDL 699

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
            + T+N KIR     +   I++ G  E   +++ IR
Sbjct: 700 TDNTLNKKIRNAQTAQWNFIMVVGQDELDAQAVNIR 735


>gi|300120854|emb|CBK21096.2| unnamed protein product [Blastocystis hominis]
          Length = 767

 Score =  419 bits (1077), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 244/651 (37%), Positives = 356/651 (54%), Gaps = 48/651 (7%)

Query: 4   DIKLTFPDGSIKNFPV-HATGSDVAESISRSLAKKAVAVAI------------------- 43
           DI +T PDG++K       T   +AE IS+ LA+  V+  +                   
Sbjct: 106 DITITLPDGAVKTGKSWETTPLMIAEGISKGLAQHVVSARVLYEDASICSSCVNTEEPEE 165

Query: 44  -------NGKVCDLSDPVREGSIEI--ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
                   G++ DL+ P+ EG+ ++  +  ED    A   HS AHI+ EA+++++  V +
Sbjct: 166 RESCDEEEGELWDLTRPL-EGNCKLWLLKFEDKGGKATFWHSSAHILGEAMENLYG-VDL 223

Query: 95  AIGPIIEDGFYYD-FDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESK 153
            IGP + DGFYYD +  +   S  E   IE +   II     F +  L+  +A ELF  K
Sbjct: 224 CIGPALTDGFYYDAYFGKMTVSEAECKDIEAEANRIIKEKQRFDRCELTKAQALELF--K 281

Query: 154 KEAYKVEILES-IPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDS 212
              +K  I+ S +P     T+YR G   DLC GPH+ ST  VK F  ++K +  YW GD+
Sbjct: 282 HNPFKTSIIRSKVPDGATTTVYRCGSLIDLCMGPHLPSTALVKGF-AVVKNSACYWLGDA 340

Query: 213 NRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKG 272
               L R+YG ++   +EL ++  F EE++K DHR+L  + DLF   E   G  F+  KG
Sbjct: 341 ENDTLQRVYGISFPDAKELKEWKKFQEEAKKNDHRRLGEQQDLFFFHELSPGSCFFLPKG 400

Query: 273 WKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
             I+  LI ++R +  +  Y E+ +P V +  LW  SGH   YR +MF   C DDT    
Sbjct: 401 AYIYNKLIEFIRHEYHERGYTEVVSPNVYNLELWNISGHASHYRDSMFLFNC-DDT---- 455

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
             + LKPMNCPGH  +F H + SYRELP+R A+FG ++RNE SG+L+GL RVR F QDDA
Sbjct: 456 -EYGLKPMNCPGHCLMFKHAMHSYRELPIRFADFGVLHRNELSGALNGLTRVRRFQQDDA 514

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
           H+FC  +Q+  E   + + +  +Y  FG     ++LSTRP+K +G  ALW  AE  +   
Sbjct: 515 HIFCRPDQIKQEVSGVLDFMRHVYGIFGM-SFNLELSTRPKKAMGDLALWQQAEASLTES 573

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
           L+        ++N G    +GAFYGPK +  + DA+ R  Q  TIQ+DF LP RF   Y 
Sbjct: 574 LNEFIGEGNWKVNPG----DGAFYGPKIDIKVMDALHRVHQTATIQLDFQLPIRFELEYK 629

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
            +      PVM+HRA+ GS+ER   I++E+FKG  P WLSP QAIV  + ++ +EYAQ++
Sbjct: 630 KADGSMERPVMVHRAILGSVERSFAILLEHFKGKWPFWLSPRQAIVIPVNATCMEYAQKV 689

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
              L  ++   E D    T+N  +RE  + +   I++ G+KEA   ++ IR
Sbjct: 690 RQRLWDNYFQAEVDDTGRTLNKMVREAQLAQFNYILVVGNKEAETDTVTIR 740


>gi|156838419|ref|XP_001642915.1| hypothetical protein Kpol_411p2 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156113495|gb|EDO15057.1| hypothetical protein Kpol_411p2 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 729

 Score =  419 bits (1077), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 238/641 (37%), Positives = 355/641 (55%), Gaps = 40/641 (6%)

Query: 5   IKLTFPDGS-IKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-----EGS 58
           +K+   DG+ +       +  D+A +IS+SL  +     +NG + DL  P+      E  
Sbjct: 69  LKVILKDGAQVDATSWETSPMDIARNISKSLPDRLCIAKVNGDLWDLERPLEGNENDEIK 128

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD--------- 109
           +E++  E      V  HS AH++ EA +       +  GP  EDGF+Y+F          
Sbjct: 129 LELLDFESDEGKRVFWHSSAHVLGEACECNLG-AHINYGPPTEDGFFYEFAARDSLKDPK 187

Query: 110 --KEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES-IP 166
             +E+  S  +   +E   + +I     F +  +S E   E+F+  K  YK  ++E+ IP
Sbjct: 188 ECEERTVSQADFPNLEGVAKNVIKEKQKFERLVMSKEDLLEMFKYSK--YKTYLVETKIP 245

Query: 167 AKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWN 226
              + T+Y+ G+  DLC GPH+  TG++K F KL+K +  Y+ GD+    L R+YG ++ 
Sbjct: 246 DGTSTTVYKCGKLIDLCVGPHIPHTGRIKAF-KLLKNSACYFLGDATNESLQRVYGISFP 304

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
            ++ +  +L FLEE+ KRDHR+L +E +LF   E   G  FW   G +I+ TL+  MR +
Sbjct: 305 DKKLMDAHLKFLEEAAKRDHRRLGKEQELFLFNEMSPGSCFWLPHGTRIYSTLVDMMRTE 364

Query: 287 I-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
             K  YEE+ TP + +  LW+ SGHW +Y+ NMF  +   +T      + LKPMNCPGH 
Sbjct: 365 YRKRGYEEVITPNMYNSKLWETSGHWANYKENMFTFEVEKET------YGLKPMNCPGHC 418

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +F    +SYRELP R+A+FG ++RNE SG+L GL RVR F QDDAH+FCT++Q+  E  
Sbjct: 419 LMFKSRERSYRELPWRVADFGVIHRNEYSGALSGLTRVRRFQQDDAHIFCTQDQIEGEIE 478

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
            I N +  +Y  FGFE   ++LSTRPEK VG    W++AE  ++  L+  K      +N 
Sbjct: 479 NIFNFLQFVYGVFGFE-FKMELSTRPEKYVGELETWNNAEAKLQSALE--KWGGDWELNP 535

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFN-AFYVNSHSEKCH---PV 521
               G+GAFYGPK + ++ DA+ R  QC TIQ+DF LP+RF   F    + E  +   PV
Sbjct: 536 ----GDGAFYGPKIDIMISDALKRWHQCATIQLDFQLPNRFELEFKAKDNQENENYERPV 591

Query: 522 MIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLS 581
           MIHRA+ GS+ER   I+ E+F G  P WLSP Q +V  +     EYAQE+ + L +    
Sbjct: 592 MIHRAILGSVERMTAILTEHFAGKWPFWLSPRQVLVVPVGVKYQEYAQEVRDKLHAAGFY 651

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
            + D    T+  K+R   + K   I I G+ E + +++ IR
Sbjct: 652 ADVDLSGNTLQKKVRTGQLLKYNFIFIVGEDELTNKTVNIR 692


>gi|291545263|emb|CBL18372.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Ruminococcus sp.
           18P13]
          Length = 646

 Score =  419 bits (1076), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 233/630 (36%), Positives = 354/630 (56%), Gaps = 25/630 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           I+LT  DGSI+      + ++V + I   L K A  V ING+V DL   + E  S E++T
Sbjct: 2   IELTLKDGSIRQAEAGQSAAEVIKGIGMGLYKAACCVKINGEVKDLRTVLTENCSFEVMT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +         H+ +HI+A+AV+ ++PE ++AIGP I++GFYYDFD E+PF++DEL +IE
Sbjct: 62  FDSIEGKKAFWHTASHILAQAVKRLYPEAKLAIGPAIDNGFYYDFDVEKPFTADELVKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-ENVTLYRQGEWFDL 182
            +M++I+    P  +  L   +A +  E   E YKVE+      K E ++ Y+QG++ DL
Sbjct: 122 AEMKQIVKEGIPLEQFELPPAEALKKLEEMGEPYKVELCSEHAGKGEPISFYKQGDFTDL 181

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPH+ +T  VK F KL+   GAYWRG     MLSRIYGTA+    EL  YL  LEE++
Sbjct: 182 CAGPHLMTTAPVKAF-KLLSCTGAYWRGSEKNKMLSRIYGTAYPKAAELEAYLKQLEEAK 240

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVL 300
            RDH KL RE++LF   +  G G+     KG ++ Q L  ++   + +  Y    TP + 
Sbjct: 241 LRDHNKLGRELELFTTVDCIGQGLPIMLPKGARVIQLLQRFVEDEEQRRGYLLTKTPLMA 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
              L++ SGHWD Y+  MF +    D  KD   FAL+PM CP    VF +  +SYR+LP+
Sbjct: 301 KSDLYKISGHWDHYKEGMFVL---GDEEKDKEVFALRPMTCPFQYQVFLNRPRSYRDLPM 357

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM---FNECLKIHNLIISIYKD 417
           RL E  +++RNE SG +HGL+RVR FT  + H+    EQ+   F  CL++ N +++    
Sbjct: 358 RLGETSTLFRNEDSGEMHGLIRVRQFTISEGHLILRPEQLEDEFRGCLELANYMLTT--- 414

Query: 418 FGF-EKIMVKLS----TRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
            G  + +  + S       EK +G+   WD+A+  MK +LD +       I+  + + E 
Sbjct: 415 LGLADDVTYRFSQWDPNNTEKYIGTPEQWDEAQGAMKKILDHLG------IHYTIGIDEA 468

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           AFYGPK +  +K+  G++    TIQ+D  L   F   Y +    K  P +IHR   G  E
Sbjct: 469 AFYGPKLDIQIKNVHGKEDTLITIQIDQMLAQLFGMEYTDVDGTKRRPYIIHRTSLGCYE 528

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
           R + ++IE + G  PLWL+P Q  +  I    ++Y  E+A  L++  + I  D R E + 
Sbjct: 529 RTLALLIEKYAGAFPLWLAPEQVKLIPIADRHMDYTLELARKLEAAGMRITVDDRAEKVG 588

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIR 622
           YKIR+  ++K+P ++  GD E   +++ +R
Sbjct: 589 YKIRQAVLEKVPYMLTIGDNEVESKTVSVR 618


>gi|126277226|ref|XP_001373323.1| PREDICTED: hypothetical protein [Monodelphis domestica]
          Length = 806

 Score =  419 bits (1076), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 241/645 (37%), Positives = 360/645 (55%), Gaps = 23/645 (3%)

Query: 5   IKLTFPDGSI-KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEII 62
           IK+   DG I +      T   VA  IS+ LA   V   +N ++ DL  P+ E S +E++
Sbjct: 166 IKIMLIDGKIVEGESWKTTPYQVAAGISQGLADNTVIAKVNDELWDLDRPLEEDSTLELL 225

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQ 121
             ++  + AV  HS AHI+ EA++S +    +  GP IE+GFY+D F +++  SS E   
Sbjct: 226 RFDNEEAQAVYWHSSAHILGEAMESYYGGC-LCYGPPIENGFYFDMFIEDRGVSSTEFPT 284

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +E   + I+     F +  +  E   E+F+  K  +K  IL         T+YR G   D
Sbjct: 285 LENMCKTIMKEKQRFERLEIKKEILLEMFKYNK--FKCRILNEKVDTPTTTVYRCGPLID 342

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHVR TG++K   K+ K +  YW G ++   L RIYG ++   + +  +  F EE+
Sbjct: 343 LCRGPHVRHTGKIKAI-KIFKNSSTYWEGKADMETLQRIYGISFPDNKMMKTWEKFQEEA 401

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVL 300
           + RDHRK+ +E +LF   +   G  F+  +G  I+ TL+ +++ +  + ++ E+ +P V 
Sbjct: 402 KNRDHRKIGKEQELFFFHDLSPGSCFFLPRGAFIYNTLMDFIKEEYHRRNFTEVISPNVY 461

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  LW+ SGHW  Y  NMF+     +T      FALKPMNCPGH  +F H  +S+RE+P+
Sbjct: 462 NSKLWETSGHWQHYSENMFSFDIEKET------FALKPMNCPGHCLMFAHRPRSWREMPI 515

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLA+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+  E       + S+Y  FGF
Sbjct: 516 RLADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCRMEQIEEEMKGCLEFLQSVYTVFGF 575

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
               + LSTRPE  +G   +W+ AE  ++  L         ++N     G+GAFYGPK +
Sbjct: 576 -SFQLNLSTRPENFLGEIEIWNQAEEQLQNSLKEFGKPW--KLNP----GDGAFYGPKID 628

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIGIMI 539
             +KDAIGR  QC TIQ+DF LP RFN  YV+  S +K  PV+IHRA+ GS+ER I I+ 
Sbjct: 629 IKIKDAIGRYHQCATIQLDFQLPIRFNLTYVSKDSDDKTRPVIIHRAILGSVERMIAILS 688

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF-RNETINYKIREH 598
           EN+ G  P WLSP Q +V  +  +  EYA +I+          + D  ++ T+N KIR  
Sbjct: 689 ENYGGKWPFWLSPCQVMVIPVGPTCEEYALQISKEFFEAGFMADVDLDQSCTLNKKIRNA 748

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            + +   I++ G+KE    ++ +R   +    + S++  I  L K
Sbjct: 749 QLAQYNFILVVGEKEKLNNAVNVRTRDNKIHGEASVVSTISKLKK 793


>gi|116333673|ref|YP_795200.1| threonyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
 gi|122269640|sp|Q03RK3|SYT_LACBA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|116099020|gb|ABJ64169.1| Threonyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
          Length = 647

 Score =  419 bits (1076), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 229/640 (35%), Positives = 369/640 (57%), Gaps = 23/640 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
           +DI + FPDG++K FP   T +DVA+SIS SLAKKAVA  ++G++ D   P+  +GSIEI
Sbjct: 2   ADISIKFPDGAVKAFPAGTTPADVAKSISISLAKKAVAAKLDGQLVDYLTPLASDGSIEI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELA 120
           +T +    L V+R++ A ++  A++  +P +++      EDGF+ D DK+ Q  S DEL 
Sbjct: 62  VTKDSDDGLTVLRNTTAALLRIALKKEFPAIRLGKVSADEDGFFVDTDKDDQQVSVDELD 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            +   ++++++      +  +S   A    +  +  +   ++ ++   ++V   + G++ 
Sbjct: 122 ALAVIVEKLVSDKLDIERITVSKADALADAKDDQ--FTTALINAVDG-DSVPFLKIGDYQ 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
            L  G  + +TG VKKF KL+ VAGAYW+G S+ PML RIYGTA+  Q +L   L   +E
Sbjct: 179 ILSDGAQLTNTGDVKKF-KLLSVAGAYWQGKSSNPMLQRIYGTAFYKQADLDADLARRQE 237

Query: 241 SEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           + +RDHR +  ++DLF +  + G+G+ +W   G  I +T+  Y+  +++ + Y+ + TP 
Sbjct: 238 ARERDHRVIGNQLDLFFVDPKVGAGLPYWMPNGATIRRTIERYIIDKEVSNGYQHVYTPV 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           + +  L++QSGHW  YR +MF        + D     L+PMNCP H+ V+NH ++SYREL
Sbjct: 298 LANLDLYKQSGHWAHYREDMFPPM----DMGDGEMLELRPMNCPSHIQVYNHHIRSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  T +D H F   EQ+ +E   I +L++ +Y DF
Sbjct: 354 PLRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVAPEQIQDEFKSILDLMVKVYADF 413

Query: 419 GFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
             +    +LS R     EK    D +W++A+ ++KG +D +     +        GE AF
Sbjct: 414 DIKDYTFRLSYRDPKNTEKYFDDDEMWNNAQAMLKGAMDDLGLPYVEA------EGEAAF 467

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +   K A+G +    TIQ+DF LP RF+  YV +  E+  PVMIHR +  ++ERF
Sbjct: 468 YGPKLDVQTKTALGNEETLSTIQLDFMLPERFDLHYVGADGEEHRPVMIHRGLVSTMERF 527

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINY 593
              + E +KG  P WL+P Q  +  ++      YA ++A  LK+  + +  D R E + Y
Sbjct: 528 TAYLTEIYKGAFPTWLAPKQVTIIPVSEEKHGAYADKLAAELKAADIRVNVDKRGEKMGY 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            IR+    KIP  ++ G+ E S  S+ +R++G   T  +S
Sbjct: 588 LIRDAQTHKIPYTLVVGEDEMSNGSVSVRKYGENQTTSMS 627


>gi|47226601|emb|CAG08617.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 677

 Score =  419 bits (1076), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 242/619 (39%), Positives = 351/619 (56%), Gaps = 34/619 (5%)

Query: 5   IKLTFPDGSIKNFPV-HATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEII 62
           IK+T P G + +      T   VA  IS+ LA   V   +N  V DL  P+ E  +++++
Sbjct: 74  IKVTLPGGKVVDAESWRTTPYQVACGISQGLADNTVIAKVNNDVWDLDRPLEEDCTLQLL 133

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQ 121
             +D  + AV  HS AHI+ EA++ ++    +  GP IE+GFYYD F + +  SS++   
Sbjct: 134 KFDDEEAQAVYWHSSAHILGEAMERVYGGC-LCYGPPIENGFYYDMFLENEGVSSNDFPC 192

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +E   ++II    PF +  +  E   E+F+  K  +K  IL         T+YR G   D
Sbjct: 193 LENLCKKIIKEKQPFERLEIKKETLLEMFKYNK--FKCRILNEKVTTPTTTVYRCGPLID 250

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHVR TG++K   K+ K +  YW G ++   L RIYG ++   + L ++  F EE+
Sbjct: 251 LCRGPHVRHTGKIKAL-KIHKNSSTYWEGKADMESLQRIYGISFPDPKMLKEWEKFQEEA 309

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
           + RDHRKL RE +LF   +   G  F+  KG  I+ TLI ++R + +   ++E+ +P + 
Sbjct: 310 KNRDHRKLGREQELFFFHDLSPGSCFFLPKGAFIYNTLIEFIRSEYRRRGFQEVVSPNIY 369

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  LWQ SGHW  Y  NMF+ +   +T      FALKPMNCPGH  +F+H  +S+RELP+
Sbjct: 370 NSKLWQTSGHWQHYSENMFSFESEKET------FALKPMNCPGHCLMFDHRPRSWRELPL 423

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+A+FG ++RNE SG+L GL RVR F QDDAH+FC+ +Q+  E     + + ++Y  FGF
Sbjct: 424 RMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCSMDQIEGEIKGCLDFLRTVYNVFGF 483

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL-LGEGAFYGPKF 479
               + LSTRPEK +G   +WD AE         ++NS  +     VL  G+GAFYGPK 
Sbjct: 484 -TFKLNLSTRPEKFLGDPDVWDQAEK-------QLENSLNEFGEKWVLNPGDGAFYGPKI 535

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV-NSHSEKCHPVMIHRAVFGSIERFIGIM 538
           +  +KDAIGR  QC TIQ+DF LP RFN  +V +   +K  PV+IHRA+ GS+ER I I+
Sbjct: 536 DIQIKDAIGRYHQCATIQLDFQLPIRFNLTFVGHDGDDKNRPVIIHRAILGSVERMIAIL 595

Query: 539 IENFKGNL---------PLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-N 588
            ENF G           PLWLSP Q ++  +  +  EYAQ++     S     + D    
Sbjct: 596 TENFGGKWWAVSEGTRRPLWLSPTQVMIVPVGPTCEEYAQKVRQDFHSSGFMTDVDLDPG 655

Query: 589 ETINYKIREHSIKKIPIII 607
            T+N KIR   + +   I+
Sbjct: 656 CTLNKKIRNAQLAQYNFIL 674


>gi|332251676|ref|XP_003274972.1| PREDICTED: threonyl-tRNA synthetase, cytoplasmic isoform 2
           [Nomascus leucogenys]
          Length = 756

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 233/596 (39%), Positives = 341/596 (57%), Gaps = 22/596 (3%)

Query: 32  RSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWP 90
           + LA   V   +N  V DL  P+ E S +E++  ED  + AV  HS AHIM EA++ ++ 
Sbjct: 144 QGLADNTVIAKVNNVVWDLDRPLEEDSTLELLKFEDEEAQAVYWHSSAHIMGEAMERVYG 203

Query: 91  EVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKAREL 149
              +  GP IE+GFYYD + +E   SS++ + +E   ++II     F +  +  E    +
Sbjct: 204 GC-LCYGPPIENGFYYDMYLEEGGVSSNDFSSLEALCKKIIKEKQAFERLEVKKETLLAM 262

Query: 150 FESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWR 209
           F+  K  +K  IL         T+YR G   DLCRGPHVR TG++K   K+ K +  YW 
Sbjct: 263 FKYNK--FKCRILNEKVNTPTTTVYRCGPLIDLCRGPHVRHTGKIKAL-KIHKNSSTYWE 319

Query: 210 GDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWH 269
           G ++   L RIYG ++   + L ++    EE++ RDHRK+ R+ +L+   E   G  F+ 
Sbjct: 320 GKADMETLQRIYGISFPDPKMLKEWEKLQEEAKNRDHRKIGRDQELYFFHELSPGSCFFL 379

Query: 270 RKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTI 328
            KG  I+  LI ++R +  K  ++E+ TP + +  LW  SGHW  Y  NMF+ +   +  
Sbjct: 380 PKGAYIYNALIEFIRSEYRKRGFQEVVTPNIFNSRLWMTSGHWQHYSDNMFSFEVEKEL- 438

Query: 329 KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQ 388
                FALKPMNCPGH  +F+H  +S+RELP+RLA+FG ++RNE SG+L GL RVR F Q
Sbjct: 439 -----FALKPMNCPGHCLMFDHRPRSWRELPLRLADFGVLHRNELSGALTGLTRVRRFQQ 493

Query: 389 DDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIM 448
           DDAH+FC  EQ+ +E     + + ++Y  FGF    + LSTRPEK +G   +WD AE  +
Sbjct: 494 DDAHIFCAMEQIEDEIKGCLDFLRTVYSIFGF-SFKLNLSTRPEKFLGDIEVWDQAEKQL 552

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
           +  L+      +  +N+    G+GAFYGPK +  +KDAIGR  QC TIQ+DF LP RFN 
Sbjct: 553 ENSLNEFGEKWE--LNS----GDGAFYGPKIDIQIKDAIGRYHQCATIQLDFQLPIRFNL 606

Query: 509 FYVNSHS-EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEY 567
            YV+    +K  PV++HRA+ GS+ER I I+ EN+ G  P WLSP Q +V  +  +  EY
Sbjct: 607 TYVSHDGDDKKRPVIVHRAILGSVERMIAILTENYGGKWPFWLSPRQVMVVPVGPTCDEY 666

Query: 568 AQEIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           AQ++           + D     T+N KIR   + +   I++ G+KE    ++ IR
Sbjct: 667 AQKVRQQFHDAKFMADIDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKISGTVNIR 722


>gi|330800299|ref|XP_003288175.1| threonyl-tRNA synthetase [Dictyostelium purpureum]
 gi|325081805|gb|EGC35308.1| threonyl-tRNA synthetase [Dictyostelium purpureum]
          Length = 713

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 236/649 (36%), Positives = 359/649 (55%), Gaps = 26/649 (4%)

Query: 5   IKLTFPDGS-IKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           I +T PDG  I       T  DVA+ ISR LA   V+  +N ++ D+S P+  +  +E+ 
Sbjct: 80  ILITLPDGKVIHGVKNKTTPYDVAKGISRGLADSIVSSIVNEQIHDISRPLEGDCKLELC 139

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
             +         HS AHI+ +A++ ++   Q+ IGP   +GFYYD    E+  S+++   
Sbjct: 140 KFDTDAGKKTFWHSSAHILGQAMERVYGG-QLCIGPATSEGFYYDMAMGEKIVSAEDYKL 198

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           I +   +I+    PF +  +  + A  +F+  K  YK EI+  IPA E V+LYR G   D
Sbjct: 199 INEVAMKIVQEKQPFERLAVPRDVALTMFKYNK--YKTEIISKIPASETVSLYRCGTLVD 256

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV +T  VK F  ++K + AYW G +    L R+YG A+  ++++ +Y  F++E+
Sbjct: 257 LCRGPHVPNTSYVKAF-SVIKNSSAYWLGKAENDTLQRVYGIAFPDKKQMEEYENFMKEA 315

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
             RDHR + R  +LF       G  F+   G +I+  L+ ++R +  +  + E+ +P V 
Sbjct: 316 ALRDHRNIGRAQELFFFHPFSPGSAFFLPHGTRIYNKLVDFIRAEYHNRGFSEVISPSVF 375

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            Q LW+QSGHW  Y  NMF +        D  TF+LKPMNCPGH  +F    +SYRELP+
Sbjct: 376 SQKLWEQSGHWAKYSENMFNIPV------DKETFSLKPMNCPGHCLMFGSRQRSYRELPL 429

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R A+FG ++RNE +G+L GL RVR F QDDAH+FCT + + NE       +  +Y  FGF
Sbjct: 430 RFADFGVLHRNELAGALTGLTRVRKFQQDDAHIFCTVDMIENEINSCLEFMQHVYGIFGF 489

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           E   + LSTRPE  +G  + W++AE  ++  L+      Q  +N     G+GAFYGPK +
Sbjct: 490 E-FQLNLSTRPENFLGEISQWNEAEKSLEKALNRFGKPWQ--LNP----GDGAFYGPKID 542

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE--KCHPVMIHRAVFGSIERFIGIM 538
             + D + R  QC TIQ+DF LP RF+  Y +  +   K  PV+IHRA+ GS+ER + I+
Sbjct: 543 IQIYDCLKRAHQCATIQLDFQLPIRFDLEYQSDDATDVKKRPVIIHRAILGSVERMMAIL 602

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           +E+  G  P W+SP QAIV T+     EY  ++A  +       + D  ++TI  K+RE 
Sbjct: 603 MEHTAGKWPFWVSPRQAIVVTVAKQHNEYGHKVAKQISELGYYCDIDESDKTIGKKVREA 662

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS---LLDAIPILTKE 644
            + +   I++ G +E     + +R   +     +S   L+    +L+KE
Sbjct: 663 QLAQYNYILVVGQEEIDNNKVNVRTRDNVVRGSISVEELVAEFAVLSKE 711


>gi|312984108|ref|ZP_07791455.1| threonine--tRNA ligase [Lactobacillus crispatus CTV-05]
 gi|310894462|gb|EFQ43537.1| threonine--tRNA ligase [Lactobacillus crispatus CTV-05]
          Length = 644

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 229/640 (35%), Positives = 359/640 (56%), Gaps = 22/640 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS K+F    +  +VA SI+ SL K AV   +NG V  L   +  +  + I+T +
Sbjct: 5   ITLPDGSEKDFDKAVSVKEVASSIATSLGKAAVGAKVNGVVKPLDYEIDNDVEVAILTDK 64

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L ++R + A  +    ++ +PE+++      E GFY D DK+      EL ++EK 
Sbjct: 65  DEEGLDILRATAAFALEAVAKNKYPELRLGQHVADEGGFYVDTDKDDQIKVTELPELEKA 124

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M++++          +   +  ++F  K + YK ++L+ I A + V  Y+ G++ D    
Sbjct: 125 MEKLVKSGQAIEHVLMDKSELEDIF--KDDPYKTDLLKKIDA-DKVDAYKLGDFVDFGFD 181

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
             + +TG++K F KL+ VAGAYW G S+ PML RI+GTA+  +  L + L    E ++RD
Sbjct: 182 ALLSNTGKIKHF-KLLSVAGAYWLGKSSNPMLQRIFGTAFFKEAALKEDLKRRAEIKERD 240

Query: 246 HRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQH 303
           HR + R++DLF +  + G+G+ +W  KG  I + +  Y+  R++ D Y+ + TP +++  
Sbjct: 241 HRTIGRDLDLFFVDPKVGAGLPYWMPKGATIRRVVERYIIDREVADGYQHVYTPVLMNLD 300

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
            ++ SGHW  YR +MF        + D     L+PMNCP H+ ++ H ++SYR+LP+R+A
Sbjct: 301 AYKTSGHWAHYRDDMFPPM----DMGDGEMLELRPMNCPSHIQIYKHHIRSYRDLPLRVA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           E G ++R E SG+L GL RVR  T +D H F   +Q+  E  KI  LI+ +YKDF     
Sbjct: 357 ELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQVQTEFAKILKLIMDVYKDFDITDY 416

Query: 424 MVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
             +LS R     +K   +D +W+ ++ ++KG +D +     D +      GE AFYGPK 
Sbjct: 417 YFRLSYRDPKNTDKYFANDEMWERSQKMLKGAMDDL---GLDYVEAE---GEAAFYGPKL 470

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +   K A+G D    TIQ+DF LP RF   YV    E+  PVMIHR + G++ERFI  + 
Sbjct: 471 DIQTKTALGNDETMSTIQLDFMLPERFGLTYVGQDGEEHRPVMIHRGIVGTMERFIAYLT 530

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           E +KG  P WL+PIQA +  + + A  EYA+++   L      +E D RNE + YKIRE 
Sbjct: 531 EIYKGAFPTWLAPIQAEIIPVNNDAHGEYAEKVRQELAKRGFRVEVDNRNEKMGYKIRES 590

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
             +K+P  ++ GD+E    S+ +RR+G+      SL D I
Sbjct: 591 QTQKVPYTLVLGDEEMKNGSVNVRRYGTDEEISKSLTDFI 630


>gi|323487567|ref|ZP_08092859.1| hypothetical protein HMPREF9474_04610 [Clostridium symbiosum
           WAL-14163]
 gi|323399124|gb|EGA91530.1| hypothetical protein HMPREF9474_04610 [Clostridium symbiosum
           WAL-14163]
          Length = 653

 Score =  417 bits (1071), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 233/632 (36%), Positives = 358/632 (56%), Gaps = 24/632 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T  DGS + +    +  D+A  IS  LA+ A A  ++G+  DL   V ++ S+ I+T  
Sbjct: 3   ITLKDGSQREYTEPKSIIDIAFDISEGLARAACAGELDGRTVDLRTVVEKDSSLNILTAR 62

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           DP  L+ +RH+C+H++AEAV+ + P+ ++ IGP IE+GFYYDFD E PF+ ++L  +EK+
Sbjct: 63  DPEGLSAMRHTCSHVLAEAVKRMRPQAKLTIGPSIENGFYYDFDTE-PFTREDLDNLEKE 121

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG-EWFDLCR 184
           M++II       K  L+ E A  L E + E YKVE+++ +P  E ++ YRQG ++ DLC 
Sbjct: 122 MKKIIKEGQKLEKFTLTREAAIRLMEERDEPYKVELIQELPENEEISFYRQGGDFTDLCA 181

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPH+ ST  +K F KL+  + AYWRGDS++  L RIYGTA+ +++EL  YL  LE+ +KR
Sbjct: 182 GPHLMSTKPIKAF-KLISSSMAYWRGDSSKAQLQRIYGTAFASKEELNAYLEHLEDIKKR 240

Query: 245 DHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKDD---YEEINTPQVL 300
           DH KL REM LF   +  G G+      G KI Q L  ++   ++D+   Y    TP + 
Sbjct: 241 DHNKLGREMRLFTTVDVIGQGLPLLMPNGVKIVQRLQRWVE-DLEDNEWGYIRTKTPLMA 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
              L++ SGHWD Y+  MF +    D   D   FAL+PM CP    V+ +   SYRELP+
Sbjct: 300 KSDLYKISGHWDHYKDGMFVL---GDEETDKEVFALRPMTCPFQYYVYKNDQHSYRELPL 356

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R +E  +++RNE SG +HGL RVR FT  + H+    +Q+  E     +L +      G 
Sbjct: 357 RYSETSTLFRNEDSGEMHGLTRVRQFTISEGHLIIRPDQVEEELAGCLDLAVHCLTTLGL 416

Query: 421 EK-IMVKLST----RPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           +  +  +LS       EK +G +  W+  +  ++ +L   KN      +     GE AFY
Sbjct: 417 QDDVTYRLSKWDPDNREKYLGDEEYWEKTQGKIRDLL-VEKNVPFTEAD-----GEAAFY 470

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +   K+  G++    TIQ+D  +   F+ ++++ + +K  P +IHR   G  ER +
Sbjct: 471 GPKIDIQAKNVYGKEDTMITIQLDCAIAENFDMYFIDQNGDKVRPYVIHRTSMGCYERTL 530

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
             +IE + G  P WL P Q  V  I+     YA E+A  LK + +    D R+E I YKI
Sbjct: 531 AWLIEKYAGKFPTWLCPEQVRVLPISDKYESYAGEVAKELKKNGVFCSVDNRSEKIGYKI 590

Query: 596 REHSIKKIPIIIICGDKEASERSIGIR-RFGS 626
           RE  + KIP +++ G +E +++++ +R RF  
Sbjct: 591 RETRLDKIPYMLVVGQQEEADKAVSVRSRFAG 622


>gi|219520186|gb|AAI43944.1| TARSL2 protein [Homo sapiens]
          Length = 766

 Score =  417 bits (1071), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 232/592 (39%), Positives = 342/592 (57%), Gaps = 22/592 (3%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAH 79
            T   VA  IS+ LA+  V   +NG++ DL  P+  + S+E++T ++  + AV  HS AH
Sbjct: 179 TTPYQVAAEISQELAESTVIAKVNGELWDLDRPLEGDSSLELLTFDNEEAQAVYWHSSAH 238

Query: 80  IMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQIEKKMQEIIARDSPFLK 138
           I+ EA++ ++    +  GP IE+GFYYD F +++  SS EL+ +E   + II    PF +
Sbjct: 239 ILGEAME-LYYGGHLCYGPPIENGFYYDMFIEDRAVSSTELSALENICKAIIKEKQPFER 297

Query: 139 QYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFF 198
             +S E   E+F+  K  +K  IL         T+YR G   DLC+GPHVR TG++K   
Sbjct: 298 LEVSKEILLEMFKYNK--FKCRILNEKVNTATTTVYRCGPLIDLCKGPHVRHTGKIKTI- 354

Query: 199 KLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI 258
           K+ K +  YW G+     L RIYG ++   + +  +  F EE++ RDHRK+ +E +LF  
Sbjct: 355 KIFKNSSTYWEGNPEMETLQRIYGISFPDNKMMRDWEKFQEEAKNRDHRKIGKEQELFFF 414

Query: 259 AEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRAN 317
            +   G  F+  +G  I+ TL  ++R +  K D+ E+ +P + +  LW+ SGHW  Y  N
Sbjct: 415 HDLSPGSCFFLPRGAFIYNTLTDFIREEYHKRDFTEVLSPNMYNSKLWEASGHWQHYSEN 474

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           MF  +   DT      FALKPMNCPGH  +F H  +S+RE+P+R A+FG ++RNE SG+L
Sbjct: 475 MFTFEIEKDT------FALKPMNCPGHCLMFAHRPRSWREMPIRFADFGVLHRNELSGTL 528

Query: 378 HGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGS 437
            GL RVR F QDDAH+FCT EQ+  E       + S+Y  FGF    + LSTRPE  +G 
Sbjct: 529 SGLTRVRRFQQDDAHIFCTVEQIEEEIKGCLQFLQSVYSTFGF-SFQLNLSTRPENFLGE 587

Query: 438 DALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ 497
             +W++AE  ++  L  +      ++N     G+GAFYGPK +  +KDAIGR  QC TIQ
Sbjct: 588 IEMWNEAEKQLQNSL--MDFGEPWKMNP----GDGAFYGPKIDIKIKDAIGRYHQCATIQ 641

Query: 498 VDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI 556
           +DF LP RFN  YV+    +K  PV+IHRA+ GS+ER I I+ EN+ G  P WLSP Q +
Sbjct: 642 LDFQLPIRFNLTYVSKDGDDKKRPVIIHRAILGSVERMIAILSENYGGKWPFWLSPRQVM 701

Query: 557 VTTITSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIII 607
           V  +  +  +YA ++++         + D  +  T+N KIR   + +   I+
Sbjct: 702 VIPVGPTCEKYALQVSSEFFEEGFMADVDLDHSCTLNKKIRNAQLAQYNFIL 753


>gi|320534417|ref|ZP_08034899.1| threonyl-tRNA synthetase [Actinomyces sp. oral taxon 171 str.
           F0337]
 gi|320133364|gb|EFW25830.1| threonyl-tRNA synthetase [Actinomyces sp. oral taxon 171 str.
           F0337]
          Length = 678

 Score =  416 bits (1070), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 242/670 (36%), Positives = 357/670 (53%), Gaps = 51/670 (7%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI-EIIT 63
           I++T  DG+ +     +TG+ + +   +      VA+ +NG+  DL   V  G++ E IT
Sbjct: 2   IEITL-DGAPRTIEAGSTGALLLQDAVKK--DGVVAMRVNGEPWDLERQVPAGAVVEPIT 58

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
                 L ++RHS  H+MA+AVQ ++P V + IGP I DGFYYDF      + + L +IE
Sbjct: 59  LSSEDGLNILRHSATHVMAQAVQEMFPGVNLGIGPFITDGFYYDFGAIDAVTPEMLREIE 118

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKE----------NVTL 173
           K+M+ I+     F+++ ++  + RE  E   + YK+E++ +  A             +T+
Sbjct: 119 KRMKRIVKEGQRFVRRDITEAQGRE--ELADQPYKLELITTKGAGAEGASVEVGAGGLTM 176

Query: 174 Y----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNT 227
           Y    R G   W DLCRGPH+ ST  + + F L K + AYW+GD +   L RIYGTAW T
Sbjct: 177 YDNVRRDGSVAWTDLCRGPHLPSTRLIGQGFALTKSSSAYWKGDQSGDSLQRIYGTAWAT 236

Query: 228 QQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RR 285
           + EL  Y   L E+ KRDHR+L  E+DL+   E+ G G++ +H KG  +   +  Y+  R
Sbjct: 237 KDELKAYQTRLAEAAKRDHRRLGAELDLYSFPEEIGPGLVVFHPKGAMLRHQIEQYVVDR 296

Query: 286 KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD-------DTIKDLRTFALKP 338
            +   ++ ++TP++    L+  SGH   Y   MF    AD       +  K  + + LK 
Sbjct: 297 HLDYGFDFVHTPEISKGGLFHTSGHLPYYADTMFPPMLADEERDAEGNITKAGQEYYLKA 356

Query: 339 MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE 398
           MNCP H  VF    +SYRELP+R  E G  YR E SG +HGL R+RGFTQDD+H +CT +
Sbjct: 357 MNCPMHNLVFRSRGRSYRELPLRFFEMGHDYRYEKSGVVHGLTRMRGFTQDDSHTYCTPD 416

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE------KRVGSDALWDDAENIMKGVL 452
           Q   E     +  +SI K FG     ++LSTR E      K +GSDA WD A   ++   
Sbjct: 417 QAGEEIRAQIDFFLSILKAFGLTDFHLELSTRDEEGAKKDKFIGSDADWDAATQALQNAC 476

Query: 453 DTIKNSSQDRINTGVLL----GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
           D           +G+ +    G  AFYGPK    +KDAIGR WQ  TIQ DFN P RF+ 
Sbjct: 477 DA----------SGLEVVPDPGGAAFYGPKVSVQVKDAIGRTWQMSTIQYDFNQPERFDL 526

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYA 568
            Y  +      P+MIH A  GS+ERFIG++ E++ G  P WLSP+Q  +  +  +   Y 
Sbjct: 527 EYTAADGTHQRPIMIHSAKLGSVERFIGVLTEHYAGAFPTWLSPVQVRLIPVAEAFDTYV 586

Query: 569 QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
            ++A  L++  + +E D  ++    KIR  S  KIP  +I G ++A   ++  R      
Sbjct: 587 DDVAARLRAKGVRVEVDHSDDRFGKKIRNASKDKIPFTLIAGGEDAEAGAVSFRFRDGQQ 646

Query: 629 TQKVSLLDAI 638
           T  V + +A+
Sbjct: 647 TNGVPVEEAV 656


>gi|255071725|ref|XP_002499537.1| predicted protein [Micromonas sp. RCC299]
 gi|226514799|gb|ACO60795.1| predicted protein [Micromonas sp. RCC299]
          Length = 722

 Score =  416 bits (1069), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 228/622 (36%), Positives = 362/622 (58%), Gaps = 21/622 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGS-DVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           IK+  PDG+IK      T   D+A  I + LA+ ++   ++G+  D+  P+  + S+++ 
Sbjct: 54  IKVVMPDGAIKEGIKFVTSPWDIAMGIHKKLAQGSLLAHVDGQDWDMRRPLEGDCSLKLF 113

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQ 121
             +DP    +  HS AH++ EA++  +    + IGP IE+GFYYD F  E+  S+ E   
Sbjct: 114 GFDDPEGKELYWHSSAHVLGEALELEYG-ADLTIGPSIEEGFYYDCFLGERTLSASETDG 172

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           I+K+M+ II    PF +  +S  +A E+F+  K  +KVE++ ++P    ++ YR G   D
Sbjct: 173 IQKRMEAIIKEKQPFQRIVVSRAEALEMFQENK--FKVELISNLPEDATISCYRCGPMVD 230

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+  T  +K    + + + A+WR D  +  L R+Y   +  ++ + +Y   +EE+
Sbjct: 231 LCRGPHLPDTAWIKTV-SVNQCSRAHWRADVTKDPLVRVYAVTFPDKKLMAEYKLRIEEA 289

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
           +KRDHR +    +LF       G  F+  +G KI+  L+ ++R K  + +Y+E+ TP V 
Sbjct: 290 KKRDHRLIGLNQELFFFHTLSPGSCFFLPQGAKIYNKLMEFIREKYWEYEYDEVITPNVY 349

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  LW+ SGH   Y+ NMF+         +   F LKPMNCPGH  +F +  +S+RELP+
Sbjct: 350 NFDLWKTSGHAAHYKENMFSFDV------EKAEFGLKPMNCPGHCVMFGNRKRSFRELPM 403

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLA+FG ++RNE SG+LHGL RVR F QDDAH+FC ++QM  E      ++  IY+ FG 
Sbjct: 404 RLADFGVLHRNEFSGALHGLTRVRRFQQDDAHIFCRQDQMEKELAAFVKMLDEIYEVFGL 463

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
              M KLSTRPE  +G    W+ AE  ++  L+      + ++N G    +GAFYGPK +
Sbjct: 464 TYEM-KLSTRPEGYLGELETWNKAEAALEAALNG--TGKEWKLNPG----DGAFYGPKID 516

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
             + DA+ R +QC T+Q+DF LP RFN  YV+  +E   P++IHRA+ GS+ER   I+ E
Sbjct: 517 ITVFDALKRRFQCATVQLDFQLPIRFNLSYVSEANEPERPIIIHRAILGSVERMFAILTE 576

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +F G  P WLSP Q ++  I+  + +YA E+ ++L+      E D  +  +  K+RE  +
Sbjct: 577 HFAGKWPFWLSPRQVMIVPISEQSRDYAHEVRSVLRKEGFYCEVDDSDRKMQKKVREAQL 636

Query: 601 KKIPIIIICGDKEASERSIGIR 622
           ++   I++ G+ E + R++ IR
Sbjct: 637 EQWNYILVVGEGEKTNRTVNIR 658


>gi|240143521|ref|ZP_04742122.1| threonine--tRNA ligase [Roseburia intestinalis L1-82]
 gi|257204557|gb|EEV02842.1| threonine--tRNA ligase [Roseburia intestinalis L1-82]
 gi|291540396|emb|CBL13507.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Roseburia
           intestinalis XB6B4]
          Length = 591

 Score =  416 bits (1069), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 226/591 (38%), Positives = 366/591 (61%), Gaps = 28/591 (4%)

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQIE 123
           ED R L  + HSCAH+MA+AV+ ++P  +  +GP++++GFYYD D  +   + D +A IE
Sbjct: 6   EDER-LNTLNHSCAHVMAQAVKHLYPNAKFWVGPVVKEGFYYDIDLGDTAVNDDVIAAIE 64

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M+++        ++ +S  +A ELF  K + YK+++++ +    N+++Y QG++ DLC
Sbjct: 65  KEMKKVCKEGKKIYRREISKAEALELF--KDDEYKLDLIDGL-EDGNISVYDQGDFTDLC 121

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +T ++ K FKL+K +G YW+GD+N  ++ RIYG  + T +EL ++L  LEE++ 
Sbjct: 122 RGPHVDNT-KLCKNFKLIKYSGVYWKGDANNHVMQRIYGVCFPTAEELEEHLKLLEEAKD 180

Query: 244 RDHRKLAREMDLFHIAED--GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVL 300
           RDHRK+ +EM LF +++D  G G+  +  KG+ ++Q L +Y++ K  K  Y  + TP V 
Sbjct: 181 RDHRKIGKEMHLF-MSDDLVGRGLPMFLPKGYTVWQELENYIKAKERKLGYLHVMTPCVG 239

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
             +L++ SGHWD Y+ NMF     +       +F L+PMNCP H+ ++ + + SY++LP+
Sbjct: 240 TVNLYKTSGHWDHYKENMFPAMEVEG-----ESFVLRPMNCPHHMMIYANRMHSYKDLPI 294

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+ E    +R E SG+L G+ R R F Q+DAH+F T EQ+ +E  K+  LI   YKDF  
Sbjct: 295 RIGEIAHDFRFEASGTLKGIERGRHFCQNDAHLFVTPEQIESEFAKVVELIFDTYKDFNI 354

Query: 421 EKIMVKLSTR-PEKRV---GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
                 LS R PE +V     D +W++AEN ++ VLD I     + I      GE AFYG
Sbjct: 355 TDYRCVLSLRDPEDKVKYHDDDEMWNNAENALRKVLDDIGIEYTEEI------GEAAFYG 408

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK +  +K AIG ++   T Q+DF LP++FN  Y++S   K  PV++HRA+ GS++RF+ 
Sbjct: 409 PKLDVNVKPAIGNEYTLSTCQLDFCLPAKFNLSYIDSDGTKKTPVVLHRAILGSLDRFMA 468

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVE---YAQEIANLLKSHHLSIETDFRNETINY 593
            ++E  KGNLPLWL+P+QA +  + +   E   Y+ ++   L  + + +E D RNE + Y
Sbjct: 469 YILEETKGNLPLWLAPVQAKILPVKNEDEELNAYSHDLYKYLDDNGIRVEIDERNEKLGY 528

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +IRE  ++K+P +++ G  EA++ ++  R  G   +  VS  D + +L ++
Sbjct: 529 RIREAQMEKVPYLLVLGKNEAADGTVSYRLHGEQNSTTVSREDFLALLKED 579


>gi|270290442|ref|ZP_06196667.1| threonyl-tRNA synthetase [Pediococcus acidilactici 7_4]
 gi|304384676|ref|ZP_07367022.1| threonine--tRNA ligase [Pediococcus acidilactici DSM 20284]
 gi|270281223|gb|EFA27056.1| threonyl-tRNA synthetase [Pediococcus acidilactici 7_4]
 gi|304328870|gb|EFL96090.1| threonine--tRNA ligase [Pediococcus acidilactici DSM 20284]
          Length = 647

 Score =  416 bits (1069), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 232/644 (36%), Positives = 361/644 (56%), Gaps = 28/644 (4%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
           ++IK+ FPDGS+K F    T  ++A+SI  SLAK AVA  +N ++ +L  P+ ++G +EI
Sbjct: 2   AEIKIEFPDGSVKPFGAGVTVLEIAKSIGTSLAKNAVAGKVNDELVNLDQPLDQDGKVEI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELA 120
           IT +      V  +S A ++  A++SI+PE+++     IE GFY D DKE Q  S DEL 
Sbjct: 62  ITKDSEDGQLVNWNSAALVLTSAIKSIYPEIRIGEIGNIEHGFYADTDKEGQQISVDELP 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR-QGEW 179
            IE KM+++I        + LS E A  L +   + Y+ ++++       V +Y   G  
Sbjct: 122 AIEDKMKDMIQAKVALSHEMLSVEDA--LAKVDSDPYQAKLVKKNAKDGKVNVYDVDGSL 179

Query: 180 F--DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
              D    P         K  KL+ VAGAYW G S+ PML RIYGT++  Q++L   L  
Sbjct: 180 IVSDCVALPDASGL----KAIKLLSVAGAYWEGKSSNPMLQRIYGTSFFNQKDLDAELAR 235

Query: 238 LEESEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEIN 295
            +E+ +RDHR +  ++DLF +  E G+G+ +W   G  I +T+  Y+  ++++  Y+ + 
Sbjct: 236 QKEARERDHRVIGNDLDLFFVDPEVGAGLPYWMPNGATIRRTIERYIIDKEVQHGYQHVY 295

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP +++   ++ SGHW  YR +MF        + D     L+PMNCP H+ V+ H ++SY
Sbjct: 296 TPVLMNLDAYKTSGHWQHYREDMFPPM----DMGDGEMLELRPMNCPSHIQVYKHHIRSY 351

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP+R+AE G ++R E SG+L GL RVR  T +D H F   +Q+  E  K+  L++ +Y
Sbjct: 352 RELPLRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVAPDQIQEEFKKVLQLMVEVY 411

Query: 416 KDFGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
           +DF       +LS R     EK    D +W+ +++++K  +D +     D +      GE
Sbjct: 412 RDFDITDYTFRLSYRDPENTEKYFDDDEMWNHSQSMLKAAMDDL---GLDYVEAE---GE 465

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
            AFYGPK +   K A+G +    TIQ+DF LP +F+  YV +  E+  PVMIHR +  ++
Sbjct: 466 AAFYGPKLDVQTKTALGNEETLSTIQLDFMLPKQFDLHYVGADGEEHRPVMIHRGLVSTM 525

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNET 590
           ERF   +IE +KG  P WL+P Q  +  +      EYA ++   +    + +E D RNE 
Sbjct: 526 ERFTAYLIEMYKGAFPTWLAPKQVTIIPVKDDLHGEYADKLREQMADQDIRVEVDHRNEK 585

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           + YKIRE   +KIP I++ GD E    ++ +RR+G   +Q VS+
Sbjct: 586 MGYKIREAQTQKIPYILVVGDNEMDSNAVSVRRYGEDDSQTVSV 629


>gi|71021529|ref|XP_760995.1| hypothetical protein UM04848.1 [Ustilago maydis 521]
 gi|46100879|gb|EAK86112.1| hypothetical protein UM04848.1 [Ustilago maydis 521]
          Length = 759

 Score =  416 bits (1069), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 230/631 (36%), Positives = 351/631 (55%), Gaps = 29/631 (4%)

Query: 5   IKLTFPDGSIKNFPVHATGS-DVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           I +T PDGS +    + T   D+A+ IS+SL+++ V   ++  + DL  P+  +  +E+ 
Sbjct: 108 ITVTMPDGSTRQGICYETSPMDIAKQISKSLSERIVISKVDDNLWDLERPLEADCKLELF 167

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF----DKEQPFSSDE 118
             + P    V  HS AH++ EA +  +    + IGP  E+GF+Y+       E+  S  +
Sbjct: 168 DFDSPEGKRVFWHSSAHVLGEACEKHY-GCHLCIGPPTEEGFFYEMAMGDSGERMISQSD 226

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES-IPAKENVTLYRQG 177
              +E  ++        F +  +S E+  E+F   K  YK  I++S IP   + T+YR G
Sbjct: 227 FGALETLIKNATKEKQKFERLVVSKEQLLEMFNYNK--YKQHIIQSKIPDGTSTTVYRCG 284

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
              DLC GPH+  TG++K    ++K + +Y+ GD N   L R+YG ++   +++++Y  F
Sbjct: 285 PMIDLCVGPHIPHTGRIKAM-TVLKNSASYFLGDQNNDSLQRLYGISFPDAKQMSEYKQF 343

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
           L E+ KRDHRK+ +E +LF   E   G  FW   G +I+ TL  +++ + +   ++E+ T
Sbjct: 344 LLEAAKRDHRKIGKEQELFMFHELSPGSCFWLPHGARIYNTLQEFLKSEYRQRGFDEVVT 403

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P + +  LWQ SGHW +Y+ +MF +        D   FALKPMNCPGH  +F    +SY+
Sbjct: 404 PNMYNSKLWQTSGHWQNYKDDMFVLGV------DKEQFALKPMNCPGHCLMFASRDRSYK 457

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ELP+RLA+FG ++RNE SG+L GL RVR F QDDAH+FC   Q+  E     + +  +Y 
Sbjct: 458 ELPLRLADFGVIHRNEASGALSGLTRVRRFCQDDAHIFCMSSQIEQEMAGCFDFLERVYG 517

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
            FGFE   ++LSTRPEK +G    W+ AE  +   LD       + +N     G+GAFYG
Sbjct: 518 LFGFE-FKLELSTRPEKFLGDIETWNAAEARLGAALDKFVPGKWE-LNP----GDGAFYG 571

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH-----PVMIHRAVFGSI 531
           PK +  + DA+ R +QC TIQ+DF LP +F   Y  + S+        PVMIHRAV GS+
Sbjct: 572 PKIDITISDAMRRHFQCATIQLDFQLPQQFKLEYRTAVSQGGETQAERPVMIHRAVVGSL 631

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           ERFI I+ E+F G  P WLSP Q +V  +T++  +YA+ +   L       + D  + T+
Sbjct: 632 ERFIAILTEHFAGKWPFWLSPRQLLVVPVTNTVFDYAKSVQQRLWDQGFFADVDLSDNTL 691

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIR 622
             KIR   I +   + + G +E    S+ IR
Sbjct: 692 PKKIRNGEIAQYNFVFVVGHEEMQTNSVNIR 722


>gi|225016667|ref|ZP_03705859.1| hypothetical protein CLOSTMETH_00576 [Clostridium methylpentosum
           DSM 5476]
 gi|224950631|gb|EEG31840.1| hypothetical protein CLOSTMETH_00576 [Clostridium methylpentosum
           DSM 5476]
          Length = 646

 Score =  416 bits (1068), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 229/648 (35%), Positives = 365/648 (56%), Gaps = 31/648 (4%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           IK+T   G++K F    + +D+A+S+   L K A A  I GK CDL  PV E   +EI+T
Sbjct: 2   IKVTLKGGTVKEFEPGVSIADIAKSLGMGLYKAACAGKIGGKACDLRTPVTEDCEVEILT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            ++        H+ +HI+A+AV+ ++P  ++AIGP +E+GFYYD + E+ F+ ++L +IE
Sbjct: 62  FDNVDGKHAFWHTASHILAQAVKRLYPNAKLAIGPAVENGFYYDIENEKGFTPEDLTKIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-ENVTLYRQGEWFDL 182
            +M++I+          L  ++A +L +   E YKVE+ +    K E ++ Y+QGE+ DL
Sbjct: 122 AEMKKIVKSGLELECFSLEPDEAVKLMQEAGEPYKVELAKEHAEKGEKISFYKQGEFVDL 181

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPH+ S   VK   KL +  GAYWRGD+N   L RIYGTA+    EL  YL  +EE++
Sbjct: 182 CAGPHLMSVSPVKAI-KLTQATGAYWRGDANNAQLVRIYGTAFPKASELEAYLAAVEEAK 240

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVL 300
           KRDH  + R++  F   +  G G+     KG ++ Q L  ++   + K  Y    TP   
Sbjct: 241 KRDHNVIGRKLGYFTTVDVIGQGLPVLLPKGARVIQILQRFVEDEEEKRGYLLTKTPYFA 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
               ++ SGHW  YR  MF +    D  KD   FAL+PM CP     + + ++SYR+LP+
Sbjct: 301 KSDFYKISGHWQHYREGMFVM---GDEEKDKEVFALRPMTCPFQFQAYLNEMRSYRDLPL 357

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM---FNECLKIHNLIISIYKD 417
           R  E  +++RNE SG +HGL+RVR FT  + H+ C  +Q+   F +CL++   ++     
Sbjct: 358 RYNETSTLFRNEASGEMHGLIRVRQFTISEGHLACRPDQVEEEFKQCLELAKFMLET--- 414

Query: 418 FGF-EKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
            G  E +  + S   E    K +GS   W++ +N+M+G+L+ ++      ++     GE 
Sbjct: 415 LGLDEDVTYRFSKWDENNRDKYIGSAEEWENVQNLMRGILNHLE------LDYTEADGEA 468

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           AFYGPK +  +K+  G++    TIQ+DF L SRF+  Y ++  +K +P +IHR   G  E
Sbjct: 469 AFYGPKLDIQIKNVYGKEDTLITIQIDFQLASRFDMVYTDTDGQKKYPYVIHRTSLGCYE 528

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
           R + +++E + G LPLW++P QA +  I     + A    + L+   L +E D R+E I 
Sbjct: 529 RTLALLLEKYAGALPLWIAPEQARILPIGERQHDAAYACRDELRKAGLRVEVDDRSEKIG 588

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
           YKIRE  ++KIP +++ GDKE    ++ +R      ++K   + A+P+
Sbjct: 589 YKIREAQLEKIPYMLVIGDKEVEANAVSVR------SRKHGEMGAMPV 630


>gi|114600756|ref|XP_001153674.1| PREDICTED: threonyl-tRNA synthetase isoform 5 [Pan troglodytes]
          Length = 641

 Score =  416 bits (1068), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 232/571 (40%), Positives = 333/571 (58%), Gaps = 22/571 (3%)

Query: 5   IKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEII 62
           IK+T PDG  +       T   +A  IS+ LA   V   +N  V DL  P+ E  S+E++
Sbjct: 83  IKVTLPDGKQVDAESWKTTPYQIACGISQGLADNTVIAKVNNLVWDLDRPLEEDCSLELL 142

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQ 121
             ED  + AV  HS AHIM EA++ ++    +  GP IE+GFYYD + +E   SS++ + 
Sbjct: 143 KFEDEEAQAVYWHSSAHIMGEAMERVYGGC-LCYGPPIENGFYYDMYLEEGGVSSNDFSS 201

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +E   ++II     F +  +  E    +F+  K  +K  IL         T+YR G   D
Sbjct: 202 LEALCKKIIKEKQAFERLEVKKETLLAMFKYNK--FKCRILNEKVNTPTTTVYRCGPLID 259

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHVR TG++K   K+ K +  YW G ++   L RIYG ++   + L ++  F EE+
Sbjct: 260 LCRGPHVRHTGKIKAL-KIHKNSSTYWEGKADMETLQRIYGISFPDPKMLKEWEKFQEEA 318

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVL 300
           + RDHRK+ R+ +L+   E   G  F+  KG  I+  LI ++R +  K  ++E+ TP + 
Sbjct: 319 KNRDHRKIGRDQELYFFHELSPGSCFFLPKGAYIYNALIEFIRSEYRKRGFQEVVTPNIF 378

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  LW  SGHW  Y  NMF+ +   +       FALKPMNCPGH  +F+H  +S+RELP+
Sbjct: 379 NSRLWMTSGHWQHYSENMFSFEVEKEL------FALKPMNCPGHCLMFDHRPRSWRELPL 432

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLA+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E     + + ++Y  FGF
Sbjct: 433 RLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSVFGF 492

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
               + LSTRPEK +G   +WD AE  ++  L+      +  +N+    G+GAFYGPK +
Sbjct: 493 -SFKLNLSTRPEKFLGDIEVWDQAEKQLENSLNEFGEKWE--LNS----GDGAFYGPKID 545

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIGIMI 539
             +KDAIGR  QC TIQ+DF LP RFN  YV+    +K  PV++HRA+ GS+ER I I+ 
Sbjct: 546 IQIKDAIGRYHQCATIQLDFQLPIRFNLTYVSHDGDDKKRPVIVHRAILGSVERMIAILT 605

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQE 570
           EN+ G  P WLSP Q +V  +  +  EYAQ+
Sbjct: 606 ENYGGKWPFWLSPRQVMVVPVGPTCDEYAQK 636


>gi|323692292|ref|ZP_08106531.1| threonyl-tRNA synthetase [Clostridium symbiosum WAL-14673]
 gi|323503617|gb|EGB19440.1| threonyl-tRNA synthetase [Clostridium symbiosum WAL-14673]
          Length = 653

 Score =  416 bits (1068), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 232/632 (36%), Positives = 357/632 (56%), Gaps = 24/632 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T  DGS + +    +  D+A  IS  LA+ A A  ++G+  DL   V ++ S+ I+T  
Sbjct: 3   ITLKDGSQREYTEPKSIIDIAFDISEGLARAACAGELDGRTVDLRTVVEKDSSLNILTAR 62

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           DP  L+ +RH+C+H++AEAV+ + P+ ++ IGP IE+GFYYDFD E PF+ ++L  +EK+
Sbjct: 63  DPEGLSAMRHTCSHVLAEAVKRMRPQAKLTIGPSIENGFYYDFDTE-PFTREDLDNLEKE 121

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG-EWFDLCR 184
           M++II       K  L+ E A  L E + E YK E+++ +P  E ++ YRQG ++ DLC 
Sbjct: 122 MKKIIKEGQKLEKFTLTREAAIRLMEERDEPYKAELIQELPENEEISFYRQGGDFTDLCA 181

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPH+ ST  +K F KL+  + AYWRGDS++  L RIYGTA+ +++EL  YL  LE+ +KR
Sbjct: 182 GPHLMSTKPIKAF-KLISSSMAYWRGDSSKAQLQRIYGTAFASKEELNAYLEHLEDIKKR 240

Query: 245 DHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKDD---YEEINTPQVL 300
           DH KL REM LF   +  G G+      G KI Q L  ++   ++D+   Y    TP + 
Sbjct: 241 DHNKLGREMRLFTTVDVIGQGLPLLMPNGVKIVQRLQRWVE-DLEDNEWGYIRTKTPLMA 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
              L++ SGHWD Y+  MF +    D   D   FAL+PM CP    V+ +   SYRELP+
Sbjct: 300 KSDLYKISGHWDHYKDGMFVL---GDEETDKEVFALRPMTCPFQYYVYKNDQHSYRELPL 356

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R +E  +++RNE SG +HGL RVR FT  + H+    +Q+  E     +L +      G 
Sbjct: 357 RYSETSTLFRNEDSGEMHGLTRVRQFTISEGHLIIRPDQVEEELAGCLDLAVHCLTTLGL 416

Query: 421 EK-IMVKLST----RPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           +  +  +LS       EK +G +  W+  +  ++ +L   KN      +     GE AFY
Sbjct: 417 QDDVTYRLSKWDPDNREKYLGDEEYWEKTQGKIRDLL-VEKNVPFTEAD-----GEAAFY 470

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +   K+  G++    TIQ+D  +   F+ ++++ + +K  P +IHR   G  ER +
Sbjct: 471 GPKIDIQAKNVYGKEDTMITIQLDCAIAENFDMYFIDQNGDKVRPYVIHRTSMGCYERTL 530

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
             +IE + G  P WL P Q  V  I+     YA E+A  LK + +    D R+E I YKI
Sbjct: 531 AWLIEKYAGKFPTWLCPEQVRVLPISDKYESYAGEVAKELKKNGVFCSVDNRSEKIGYKI 590

Query: 596 REHSIKKIPIIIICGDKEASERSIGIR-RFGS 626
           RE  + KIP +++ G +E +++++ +R RF  
Sbjct: 591 RETRLDKIPYMLVVGQQEEADKAVSVRSRFAG 622


>gi|325957298|ref|YP_004292710.1| threonyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
 gi|325333863|gb|ADZ07771.1| threonyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
 gi|327184028|gb|AEA32475.1| threonyl-tRNA synthetase [Lactobacillus amylovorus GRL 1118]
          Length = 644

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 230/640 (35%), Positives = 356/640 (55%), Gaps = 22/640 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS K F    +  DVA SI+ SL K AV   +NG+V  L   +  +  I I+T +
Sbjct: 5   VTLPDGSKKEFDKAVSVKDVASSIATSLGKAAVGAKVNGQVKPLDYEIDSDVEIAILTDK 64

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L ++R + A  +    +  +PE+++      E GFY D DK+      EL ++EK 
Sbjct: 65  DEEGLDILRATAAFALEAVAKKKYPELRLGEHVADEGGFYVDTDKKDQIKVTELPELEKA 124

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M++++          +   +  +++  K + YK E+L+ +   + V  Y+ G++ D    
Sbjct: 125 MEKLVKSGQAIEHVEMDKSELEDIY--KDDPYKSELLKKVEG-DKVDAYKLGDFVDFGFD 181

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
             + +TG++K F KL+ VAGAYW G S+ PML RI+GTA+  +  L   L    E ++RD
Sbjct: 182 ALLPNTGKIKHF-KLLSVAGAYWLGKSSNPMLQRIFGTAFFKEAALKDDLKRRAEIKERD 240

Query: 246 HRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQH 303
           HR + R++DLF +  + G+G+ +W  KG  I + +  Y+  R++ D Y+ + TP +++  
Sbjct: 241 HRTIGRDLDLFFVDPKVGAGLPYWMPKGATIRRVVERYIIDREVADGYQHVYTPVLMNLD 300

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
            ++ SGHW  YR +MF        + D     L+PMNCP H+ ++ H ++SYR+LP+R+A
Sbjct: 301 AYKTSGHWAHYRDDMFPPM----DMGDGEMLELRPMNCPSHIQIYKHHIRSYRDLPLRVA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           E G ++R E SG+L GL RVR  T +D H F   +Q+ +E  KI  LI+ +YKDF     
Sbjct: 357 ELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQVQDEFAKILKLIMDVYKDFDITDY 416

Query: 424 MVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
             +LS R     EK   +D +W+ ++ ++KG +D +     D +      GE AFYGPK 
Sbjct: 417 YFRLSYRDPKNTEKYFANDEMWERSQKMLKGAMDDL---GLDYVEAE---GEAAFYGPKL 470

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +   K A+G D    TIQ+DF LP RF   YV    E+  PVMIHR + G++ERFI  + 
Sbjct: 471 DIQTKTALGNDETMSTIQLDFMLPERFGLTYVGQDGEEHRPVMIHRGIVGTMERFIAYLT 530

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           E +KG  P WL+PIQA +  + + A  EYA+++   L       E D RNE + YKIRE 
Sbjct: 531 EIYKGAFPTWLAPIQAEIIPVNNDAHGEYAEKVRQELAKRGFRAEVDNRNEKMGYKIRES 590

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
             +K+P  ++ GD+E    S+ +RR+G+      SL D I
Sbjct: 591 QTQKVPYTLVLGDEEMKNGSVNVRRYGTDEEISKSLDDFI 630


>gi|291550699|emb|CBL26961.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Ruminococcus
           torques L2-14]
          Length = 650

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 240/627 (38%), Positives = 360/627 (57%), Gaps = 25/627 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T  DGS K +    +  DVA  IS  LA+ A A  ++G+V DL   + ++  + I+T  
Sbjct: 3   ITLKDGSKKEYSEAKSVIDVAFDISEGLARAACAGEVDGEVVDLRTVLDKDCELNILTAR 62

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D + LAV+RH+ +H+MAEAVQ+++PE +VAIGP I+ GFYYDF+  Q FS D+L  IEK+
Sbjct: 63  DEKGLAVLRHTASHVMAEAVQTLFPEAKVAIGPSIDTGFYYDFEC-QSFSRDDLDAIEKE 121

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M++II + +   +   S E A   F+ K E YKVE++E +P  E ++ Y QG+W DLC G
Sbjct: 122 MKKIIKKGAKIERFTKSREDAIAFFKEKNEPYKVELIEDLPEGEEISFYSQGDWVDLCAG 181

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PH+ ST  +K F KL+  +GAYWRGD N+ ML+RIYGTA+ T+ EL ++L  LEE++KRD
Sbjct: 182 PHLMSTKGIKAF-KLLSSSGAYWRGDENKHMLTRIYGTAYATKDELKEHLTQLEEAKKRD 240

Query: 246 HRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQH 303
           H KL REM LF   +  G G+      G  I Q L  ++   + K  Y    TP +    
Sbjct: 241 HNKLGREMKLFTTVDVIGQGLPLIMPNGVIIMQELQRWIEDEEAKRGYIRTKTPLMAKSD 300

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           L++ SGHWD Y+  MF +    D  KD   FAL+PM CP    V+     SYR+LP+R  
Sbjct: 301 LYKISGHWDHYKEGMFVL---GDEEKDKEVFALRPMTCPFQYYVYKAEQHSYRDLPLRYG 357

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM---FNECLKIHNLIISIYKDFGF 420
           E  +++RNE SG +HGL RVR FT  + H+    +QM   F +C+ +    + +    G 
Sbjct: 358 ETSTLFRNEDSGEMHGLTRVRQFTISEGHLVVRPDQMVKEFKDCIALAQYCLQV---LGV 414

Query: 421 EK-IMVKLS----TRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           E+ +   LS    T  +K +G+  +W++ E  ++ +L  +     + +      GE AFY
Sbjct: 415 EEDVTYHLSKWDPTDTKKYIGAPEVWEETEGHIRTMLQELNIPFVEDV------GEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +   K+  G++    TIQ D  L  +F+ +Y++ + +K  P +IHR   G  ER +
Sbjct: 469 GPKVDINAKNVYGKEDTMITIQWDALLAEQFDMYYIDENGDKQRPYIIHRTSVGCYERTL 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
             +IE + G  P WL P Q  V  I+    +YA ++   LK  ++    D R+E + YKI
Sbjct: 529 AWLIEKYAGMFPTWLCPEQVRVIPISDKYNDYAAKVEAQLKEANIRCSVDGRSEKMGYKI 588

Query: 596 REHSIKKIPIIIICGDKEASERSIGIR 622
           RE  + ++P ++I G KE  E+ + +R
Sbjct: 589 REARLNRVPYLLIVGAKEEEEQKVSVR 615


>gi|58337807|ref|YP_194392.1| threonyl-tRNA synthetase [Lactobacillus acidophilus NCFM]
 gi|227904456|ref|ZP_04022261.1| theronyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
 gi|73919799|sp|Q5FIW3|SYT_LACAC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|58255124|gb|AAV43361.1| theronyl-tRNA synthetase [Lactobacillus acidophilus NCFM]
 gi|227867831|gb|EEJ75252.1| theronyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
          Length = 644

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 229/640 (35%), Positives = 359/640 (56%), Gaps = 22/640 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS K F    +  +VA SI+ SL K AV   +NG+V  L   +  +  I IIT +
Sbjct: 5   VTLPDGSKKEFDKAVSVKEVASSIATSLGKAAVGAKVNGQVKPLDYEIDSDVEIAIITDK 64

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L ++R + A       +  +PE+++      E GFY D DK+      EL ++EK 
Sbjct: 65  DEEGLDILRATAAFAFEAVAKKKYPELRLGQHVADEGGFYVDTDKKDQIKVTELPELEKA 124

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+++I    P     +   +  E+F  K + +K ++L+ I + + V  Y+ G++ D    
Sbjct: 125 MEKLIKSGQPIEHVVMDKSELEEMF--KDDPFKSDLLKKIDS-DKVDAYKLGDFVDFGFD 181

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
             + +TG++K F KL+ VAGAYW G S+ PML RI+GTA+  +  L + L    E ++RD
Sbjct: 182 ALLPNTGKIKHF-KLLSVAGAYWLGKSSNPMLQRIFGTAFFKEAALKEDLKRRAEIKERD 240

Query: 246 HRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQH 303
           HR + R++DLF +  + G+G+ +W  KG  I + +  Y+  R++ D Y+ + TP +++  
Sbjct: 241 HRTIGRDLDLFFVDPKVGAGLPYWMPKGATIRRVVERYIIDREVADGYKHVYTPVLMNLD 300

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
            ++ SGHW  YR +MF        + D     L+PMNCP H+ ++ H ++SYR+LP+R+A
Sbjct: 301 AYKTSGHWAHYRDDMFPPM----DMGDGEMLELRPMNCPSHIQIYKHHIRSYRDLPLRVA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           E G ++R E SG+L GL RVR  T +D H F   +Q+ +E  KI  LI+ +Y+DF     
Sbjct: 357 ELGMMHRYEKSGALSGLQRVREMTLNDGHTFVELDQVQSEFAKILKLIMDVYRDFDITDY 416

Query: 424 MVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
             +LS R     +K   +D +W+ ++ ++KG +D +     D +      GE AFYGPK 
Sbjct: 417 YFRLSYRDPKNTDKYFANDEMWERSQKMLKGAMDDL---GLDYVEAE---GEAAFYGPKL 470

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +   K A+G D    TIQ+DF LP RF   YV    E+  PVM+HR + G++ERFI  + 
Sbjct: 471 DIQTKTALGNDETMSTIQLDFMLPERFGLTYVGKDGEEHRPVMVHRGIVGTMERFIAYLT 530

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           E +KG  P WL+P+QA +  + + A  EYA+++   L      +E D RNE + YKIRE 
Sbjct: 531 EIYKGAFPTWLAPVQAEIIPVNNEAHGEYAEKVRQELAKRGFRVEVDDRNEKMGYKIRES 590

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
             +K+P  ++ GD+E    S+ +RR+G+      SL D I
Sbjct: 591 QTQKVPYTLVLGDEEMKNGSVNVRRYGTDEEISKSLDDFI 630


>gi|323466103|gb|ADX69790.1| Threonyl-tRNA synthetase 1 [Lactobacillus helveticus H10]
          Length = 661

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 230/640 (35%), Positives = 361/640 (56%), Gaps = 22/640 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPE 65
           +T PDGS K+F    T +D+A +I+ SL K AVA  +NG++  L   +   S + IIT +
Sbjct: 22  ITLPDGSKKDFEESLTIADLAHNIATSLGKAAVAGKVNGELKPLDYKLDSDSEVAIITNK 81

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L V+R + A +     +  +PE+++      E GFY D DK+      EL ++EK 
Sbjct: 82  DEEGLDVLRATAAFVFEAVAKCEYPELRLGEHVADEGGFYVDTDKDDQIKVGELPKLEKA 141

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           MQ++I          ++  +  +L+++ K  +K E+L  +   + V  Y+ G++ D    
Sbjct: 142 MQKVIKNGEKIEHVQIAKSELEDLYKNDK--FKSELLAKVEG-DTVDAYKLGDFVDFGFD 198

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
             + +TG++K+F KL+ VAGAYW G S+ PML RI+GTA+  + +L   L   +E ++RD
Sbjct: 199 ALLPNTGKIKQF-KLLSVAGAYWLGKSSSPMLQRIFGTAFFKEADLKADLKRRQEIKERD 257

Query: 246 HRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQH 303
           HR + R++DLF +  + G+G+ +W  KG  I + +  Y+  R++ D Y+ + TP +++  
Sbjct: 258 HRTIGRDLDLFFVDPKVGAGLPYWMPKGATIRRVVERYIIDREVADGYQHVYTPVLMNLD 317

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
            ++ SGHW  YR +MF        + D     L+PMNCP H+ +F H ++SYR+LP+R+A
Sbjct: 318 AYKTSGHWAHYRDDMFPPM----DMGDGEMLELRPMNCPSHIQIFKHHIRSYRDLPLRVA 373

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           E G ++R E SG+L GL RVR  T +D H F   +Q+  E  KI  LI+ +YKDF     
Sbjct: 374 ELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQVQTEFAKILKLIMDVYKDFDITDY 433

Query: 424 MVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
             +LS R     +K   +D +W+ ++ ++KG +D +     D +      GE AFYGPK 
Sbjct: 434 YFRLSYRDPKNTDKYFANDEMWEKSQKMLKGAMDDL---GLDYVEAE---GEAAFYGPKL 487

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +   K A+G D    TIQ+DF LP RF   YV    E+  PVMIHR + G++ERFI  + 
Sbjct: 488 DIQTKTALGNDETMSTIQLDFMLPDRFGLTYVGKDGEEHRPVMIHRGIVGTMERFIAYLT 547

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           E +KG  P WL+P+QA +  + + A  EYA+++   L      +E D RNE + YKIRE 
Sbjct: 548 EIYKGAFPTWLAPVQAEIIPVNNEAHGEYAEKVRAELAKRGFRVEVDDRNEKMGYKIRES 607

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
             +K+P  ++ GD+E     + +R +G+      SL D I
Sbjct: 608 QTQKVPYTLVLGDEEMKSGKVNVRCYGTDEEISKSLDDFI 647


>gi|329945633|ref|ZP_08293366.1| threonine--tRNA ligase [Actinomyces sp. oral taxon 170 str. F0386]
 gi|328528636|gb|EGF55601.1| threonine--tRNA ligase [Actinomyces sp. oral taxon 170 str. F0386]
          Length = 683

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 234/636 (36%), Positives = 345/636 (54%), Gaps = 48/636 (7%)

Query: 39  VAVAINGKVCDLSDPVREGSI-EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIG 97
           VA+ +NG+  DL   V  G++ E IT      L ++RHS  H+MA+AVQ ++P+V + IG
Sbjct: 38  VAMRVNGEPWDLDRQVPAGAVVEPITLASEDGLNILRHSATHVMAQAVQEMFPQVNLGIG 97

Query: 98  PIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAY 157
           P I DGFYYDF      + + L +IEK+M+ I+     F+++ ++  + RE  E   + Y
Sbjct: 98  PFITDGFYYDFGAIDAVTPEMLREIEKRMKHIVKEGQRFVRRDITEAQGRE--ELADQPY 155

Query: 158 KVEILESIPAKE----------NVTLY----RQGE--WFDLCRGPHVRSTGQVKKFFKLM 201
           K+E++ +  A             +T+Y    R G   W DLCRGPH+ ST  + + F L 
Sbjct: 156 KLELITTKGAGAEGASVEVGAGGLTMYDNVRRDGSVAWTDLCRGPHLPSTRLIGQGFALT 215

Query: 202 KVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED 261
           K + AYW+GD +   L RIYGTAW ++ +L  Y   L E+ KRDHRKL  E+DL+   E+
Sbjct: 216 KSSSAYWKGDQSGDSLQRIYGTAWASKDDLKAYQTRLAEAAKRDHRKLGAELDLYSFPEE 275

Query: 262 -GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMF 319
            G G++ +H KG  +   +  Y+  + +D  ++ ++TP++    L+  SGH   Y   MF
Sbjct: 276 IGPGLVVFHPKGAMLRHQIEQYVVDRHQDYGFDFVHTPEISKGGLFHTSGHLPYYADTMF 335

Query: 320 AVKCAD-------DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE 372
               AD       +  K  + + LK MNCP H  +F    +SYRELP+R  E G  YR E
Sbjct: 336 PPMLADEERDGQGNITKAGQEYYLKAMNCPMHNLIFRSRGRSYRELPLRFFEMGHDYRYE 395

Query: 373 PSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
            SG +HGL R+RGFTQDD+H +CT EQ   E     +  +SI K FG     ++LSTR E
Sbjct: 396 KSGVVHGLTRMRGFTQDDSHTYCTPEQAGEEIRAQIDFFLSILKAFGLTDFYLELSTRDE 455

Query: 433 ------KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL----GEGAFYGPKFEYI 482
                 K +GSDA W  A   ++   D           +G+ +    G  AFYGPK    
Sbjct: 456 DGAKKDKFIGSDADWAAATRALQDACDA----------SGLEVVPDPGGAAFYGPKVSVQ 505

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDAIGR WQ  TIQ DFN P RF+  Y  +      P+MIH A  GS+ERFIG++ E++
Sbjct: 506 VKDAIGRTWQMSTIQYDFNQPERFDLEYTAADGTHQRPIMIHSAKLGSVERFIGVLTEHY 565

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WLSP+Q  +  +  +  +Y  ++A  L++  + +E D  ++    KIR  S  K
Sbjct: 566 AGAFPTWLSPVQVRLIPVAEAFDDYVDDVAAQLRAQGVRVEVDHSDDRFGKKIRNASKDK 625

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           IP  +I G ++A   ++  R      T  V++ +A+
Sbjct: 626 IPFTLIAGGEDAEAGAVSFRFRDGEQTNGVAVKEAV 661


>gi|238922273|ref|YP_002935787.1| threonyl-tRNA synthetase [Eubacterium eligens ATCC 27750]
 gi|238873945|gb|ACR73653.1| threonyl-tRNA synthetase [Eubacterium eligens ATCC 27750]
          Length = 591

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 226/591 (38%), Positives = 366/591 (61%), Gaps = 28/591 (4%)

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQIE 123
           ED R L  + HSCAH+MA+AV+ ++P  +  +GP++++GFYYD D  +   + D +  IE
Sbjct: 6   EDER-LNTLNHSCAHVMAQAVKHLYPHAKFWVGPVVKEGFYYDIDLGDNVINDDAIEAIE 64

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M++I        ++ +S E+A E+F  K + YK++++  +    N+T+Y QG++ DLC
Sbjct: 65  KEMKKICKEGKKIYRREVSKEEALEMF--KDDMYKLDLISGL-EDGNITVYDQGDFTDLC 121

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +T ++ K FKL+K +G YW+GD++  ++ RIYG  + T +EL ++L  LEE+++
Sbjct: 122 RGPHVDNT-KLCKNFKLVKYSGVYWKGDASNHVMQRIYGVCFPTAEELEEHLKLLEEAKE 180

Query: 244 RDHRKLAREMDLFHIAED--GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVL 300
           RDHRK+ +EM+LF +++D  G G+  +  KG+ ++Q L +Y++ K  K  Y  + TP V 
Sbjct: 181 RDHRKIGKEMELF-MSDDLIGRGLPMFLPKGYTVWQELENYIKDKERKLGYLHVMTPCVG 239

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
             +L++ SGHWD Y+ NMF     +       +F L+PMNCP H+ ++ + + SY++LP+
Sbjct: 240 TVNLYKTSGHWDHYKENMFPAMEVEG-----ESFVLRPMNCPHHMMIYANKMHSYKDLPI 294

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+ E    +R E SG+L G+ R R F Q+DAH+F T EQ+ +E  K+ +LI   YKDF  
Sbjct: 295 RIGEIAHDFRFEASGTLKGIERGRHFCQNDAHLFVTPEQIESEFAKVVDLIFETYKDFNI 354

Query: 421 EKIMVKLSTR-PEKRV---GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
                 LS R PE +V     D +W++AEN ++ VL+ I     + I      GE AFYG
Sbjct: 355 TDYRCVLSLRDPEDKVKYHDDDEMWNNAENALRKVLNDIGIEYTEEI------GEAAFYG 408

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK +  +K AIG ++   T Q+DF LPS+FN  Y++   ++  PV++HRA+ GS++RF+ 
Sbjct: 409 PKLDVNVKPAIGNEYTLSTCQLDFCLPSKFNLTYIDKDGQRKTPVVLHRAILGSLDRFMA 468

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVE---YAQEIANLLKSHHLSIETDFRNETINY 593
            ++E  KGNLPLWL+P+QA +  + +   E   YA  + + L  + + +E D R E + Y
Sbjct: 469 YILEETKGNLPLWLAPVQATILPVKNEDEELNAYAHGLYDYLADNGIRVEIDERAEKLGY 528

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           ++RE  +KKIP +I+ G  EA++ ++  R  G   +  VS  + + +L  E
Sbjct: 529 RVREAQVKKIPYLIVLGKNEAADGTVSYRLHGEQKSTTVSKDEFVAMLKDE 579


>gi|291525280|emb|CBK90867.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Eubacterium
           rectale DSM 17629]
 gi|291529262|emb|CBK94848.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Eubacterium
           rectale M104/1]
          Length = 657

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 238/656 (36%), Positives = 367/656 (55%), Gaps = 32/656 (4%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K+T  DGS K +    +  ++A+ IS  LA+ A A  ++G++ DL   + ++ ++ IIT
Sbjct: 1   MKITLKDGSSKEYSEAKSVYEIAKDISEGLARAACAGEVDGEIVDLRTVLDKDCTLNIIT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
             D   L VIRH+ +H++A+AV++++P+ ++ IGP I+DGFYYDFD  QPFS ++L  +E
Sbjct: 61  ASDEEGLRVIRHTASHVLAQAVKNLFPDAKITIGPAIDDGFYYDFDS-QPFSREDLDALE 119

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M++II +     +  L  E+A +  + K E YKVE++E +P  E ++ Y QG + DLC
Sbjct: 120 AEMKKIIKQGHEITRFTLPREEAIKFMKEKDEPYKVELIEELPEGEEISFYDQGGFVDLC 179

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+ ST  VK F KL   + AYWRGDSN+  L RIYGTA+N +++L  +L  +EE++K
Sbjct: 180 AGPHLMSTKGVKAF-KLTASSMAYWRGDSNKARLHRIYGTAYNKKEDLKAHLERMEEAKK 238

Query: 244 RDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD------DYEEINT 296
           RDH KL REM+LF   +  G G+     KG K    +I  ++R I+D       Y    T
Sbjct: 239 RDHNKLGREMELFTTVDVIGQGLPLMMPKGTK----MIMKLQRWIEDLEDKEWGYVRTKT 294

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD--LRTFALKPMNCPGHVAVFNHGLKS 354
           P +    L++ SGHWD Y   MF +    D  KD      AL+PM CP    V+     S
Sbjct: 295 PLMAKSDLYKISGHWDHYLDGMFVLG---DPEKDGEEEVMALRPMTCPFQYYVYKAKQHS 351

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YR+LP R+ E  +++RNE SG +HGL RVR FT  + H     +Q   E     NL   +
Sbjct: 352 YRDLPYRMGETSTLFRNEDSGEMHGLTRVRQFTISEGHNVIRPDQCEEELKACFNLNRYV 411

Query: 415 YKDFGFEK-IMVKLST----RPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL 469
            K  G E  +  +LS       EK +G D  W+  + +++ +L       ++ +      
Sbjct: 412 LKVLGLENDVTYRLSKWDPKNTEKYLGDDEYWNSTQEVLRNIL------IEENVPFVEAD 465

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG 529
           GE AFYGPK +   K+  G++    TIQ+D  +   F+ +Y++ + +K  P +IHR   G
Sbjct: 466 GEAAFYGPKIDIQAKNVYGKEDTMVTIQLDCAIAENFDLYYIDQNGDKIRPYIIHRTSLG 525

Query: 530 SIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE 589
             ER +  +IE++ G  P WL P Q  V  I+    +YA+++A+ LK + + +  D R E
Sbjct: 526 CYERTLAWLIEHYAGKFPTWLCPEQVRVLPISEKYADYAKKVADELKRNDVDVTVDNRAE 585

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIR-RFGSTTTQKVSLLDAIPILTKE 644
            I YKIRE  + K+P +++ G  E ++ ++ +R RF      K  L D I  + KE
Sbjct: 586 KIGYKIREARMDKLPYMLVVGADEEADGTVSVRSRFEGNEGVK-PLSDFIDQICKE 640


>gi|50555740|ref|XP_505278.1| YALI0F11231p [Yarrowia lipolytica]
 gi|49651148|emb|CAG78085.1| YALI0F11231p [Yarrowia lipolytica]
          Length = 755

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 235/635 (37%), Positives = 355/635 (55%), Gaps = 34/635 (5%)

Query: 5   IKLTFPDGSIKNFPVHATGS-DVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           I +T  DG+ K      T   D+ ++IS+SL  + V   +NG++ D+  P+  +  +E +
Sbjct: 99  IVVTLKDGTPKEATAWETSPMDICKTISKSLPDQTVIAKVNGELWDMERPLEGDAKLEFL 158

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF---DKEQPFSSDEL 119
                    V  HS AH++ EA +  +    + IGP  EDGF+Y+    + +    + + 
Sbjct: 159 DFNSDEGKRVFWHSSAHVLGEATERHYG-AHLCIGPPTEDGFFYEMSIDNGDTHVQACDY 217

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES-IPAKENVTLYRQGE 178
             +E   +  I     F +  LS E   ++F   K  YKVE+++  IP   + T+YR G 
Sbjct: 218 DPLETVAKSAIKDKQKFERLVLSKENLLKMFAYNK--YKVELIQKKIPDGTSTTVYRCGP 275

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLC GPH+  TG++K F KL+K + +Y+ GD +   L RI+G ++  ++ +T++L FL
Sbjct: 276 LIDLCVGPHIPHTGKIKAF-KLLKNSSSYFLGDKDNDSLQRIFGISFPDKKLMTEHLKFL 334

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
           EE+ KRDHRK+ RE +LF   +   G  FW   G +I+  L   +R++  K  YEE+ TP
Sbjct: 335 EEAAKRDHRKIGREQELFLFNDMSPGSCFWLPHGARIYSALTDLLRKEYRKRGYEEVITP 394

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  LW+ SGHW +Y+ +MF  +   +       F LKPMNCPGH  +F    +SY+E
Sbjct: 395 NMYNSKLWETSGHWQNYKDDMFTFEIEKEK------FGLKPMNCPGHCLMFKARDRSYKE 448

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP R+A+FG ++RNE SG+L GL RVR F QDDAH+FC   Q+ +E   I + +  IY  
Sbjct: 449 LPWRVADFGVIHRNEASGALTGLTRVRRFQQDDAHIFCMPSQIQSEITGIFDFLKKIYTI 508

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFE   +KLSTRP+K VG    W+DAE  ++  L+  K  +   +N     G+GAFYGP
Sbjct: 509 FGFE-FKMKLSTRPDKYVGEIETWNDAEKQLEEALN--KWGANWELNP----GDGAFYGP 561

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK----------CHPVMIHRAV 527
           K + ++ DA+ R  QC TIQ+DF LP+RF+  + NS +              PVMIHRA+
Sbjct: 562 KIDIVISDALHRWHQCATIQLDFQLPNRFDLNFKNSAAMGEGEADSAALYTRPVMIHRAI 621

Query: 528 FGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR 587
           +GS ER   I+ E+F G  P WLSP Q +V  +     +YAQE+ + L       + D  
Sbjct: 622 YGSFERMTAILCEHFAGKWPFWLSPRQVLVIPVGPKYNDYAQEVRDELVDAGFFADVDNG 681

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
             T+  K+RE  +K+     I G++E + +S+ IR
Sbjct: 682 PNTLQKKVREAQLKQYNFTFIVGEEEKTAKSVNIR 716


>gi|313124186|ref|YP_004034445.1| threonyl-tRNA synthetase 1 [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
 gi|312280749|gb|ADQ61468.1| Threonyl-tRNA synthetase 1 [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
          Length = 643

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 228/648 (35%), Positives = 368/648 (56%), Gaps = 27/648 (4%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           LT PDGS K F V  + +D+A SIS SLAK AVA  ++G++  L   +  +  + I+T +
Sbjct: 5   LTLPDGSKKEFDVAVSVADLASSISTSLAKNAVAGKVDGEIKPLDFQLDADHEVAILTNK 64

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L+V+R + A ++   V+  +PE+++    + EDGF+ + DKE      EL  +EK 
Sbjct: 65  DAEGLSVLRATVAFVLEALVKDKYPEIKLGQAEVSEDGFFIETDKEDQIKVTELPDLEKA 124

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN--VTLYRQGEWFDLC 183
           +Q+ I          ++  +  E F  K + YK E+L    AKE   V  Y+ G++ D  
Sbjct: 125 LQKAIKNGEAIEHVQVAKSELAEAF--KDDPYKSELL----AKEGDVVDAYKLGDFVDFG 178

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
               + +TG++KKF KL+ VAGAYW+G S+ PML RI+GTA+  + +L   L    E ++
Sbjct: 179 FSALLPNTGKIKKF-KLLSVAGAYWKGKSSNPMLQRIFGTAFFKEADLEADLKRRAEIKE 237

Query: 244 RDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLD 301
           RDHR + R++DLF +  + G+G+ +W  KG  I + +  Y+  +++   Y+ + TP +++
Sbjct: 238 RDHRTIGRDLDLFFVDPKVGAGLPYWMPKGATIRRIIERYIVDKEVAAGYQHVYTPVLMN 297

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
              ++ SGHW  YR +MF        + +     L+PMNCP H+ ++ H ++SYRELP+R
Sbjct: 298 LDAYKTSGHWAHYREDMFPPM----DMGEGEMLELRPMNCPSHIQIYKHHIRSYRELPIR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AE G ++R E SG+L GL RVR  T +D H F   +Q+  E  +   +I+ +Y DF   
Sbjct: 354 IAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQVQEEFARTLQIIMDVYHDFDIN 413

Query: 422 KIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
               +LS R     +K   +D +W+ +++++K  +D +     D +      GE AFYGP
Sbjct: 414 DYYFRLSYRDPKNTDKYFANDEMWERSQSMLKAAMDDM---GLDYVEAE---GEAAFYGP 467

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +   K A+G D    TIQ+DF LP RF   Y+ +  E+  PVMIHR + G++ERFI  
Sbjct: 468 KLDIQTKTALGNDETMSTIQLDFMLPERFELSYIGADGEEHRPVMIHRGIVGTMERFIAY 527

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           + E +KG  P WL+P+QA +  +   A  +YA+++ + L +     E DFRNE + YKIR
Sbjct: 528 LTEIYKGAFPTWLAPVQAEIIPVNLDAHSDYAKKVRDELVAKGFRAEIDFRNEKLGYKIR 587

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           E   +K+P  ++ GD E +  ++ +R +G+      SL + +  L+K+
Sbjct: 588 ESQTQKVPYTLVLGDDEMNAGTVNVRPYGTEEQNSESLAEFMDKLSKD 635


>gi|256273733|gb|EEU08659.1| Ths1p [Saccharomyces cerevisiae JAY291]
          Length = 734

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 234/640 (36%), Positives = 350/640 (54%), Gaps = 39/640 (6%)

Query: 5   IKLTFPDGSIKNFPV-HATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-----EGS 58
           +K+   DG++K       T  D+A+ IS+SLA +     ING++ DL  P       E  
Sbjct: 75  LKIVLKDGAVKEATSWETTPMDIAKGISKSLADRLCISKINGQLWDLDRPFEGEANEEIK 134

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF---------- 108
           +E++  E      V  HS AH++ E+ +       + +GP  +DGF+Y+           
Sbjct: 135 LELLDFESDEGKKVFWHSSAHVLGESCECHLG-AHICLGPPTDDGFFYEMAVRDSMKDIS 193

Query: 109 -DKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES-IP 166
              E+  S  +   +E   + +I +   F +  +S E   ++F   K  YK  ++++ +P
Sbjct: 194 ESPERTVSQADFPGLEGVAKNVIKQKQKFERLVMSKEDLLKMFHYSK--YKTYLVQTKVP 251

Query: 167 AKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWN 226
                T+YR G+  DLC GPH+  TG++K F KL+K +  Y+ GD+    L R+YG ++ 
Sbjct: 252 DGGATTVYRCGKLIDLCVGPHIPHTGRIKAF-KLLKNSSCYFLGDATNDSLQRVYGISFP 310

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
            ++ +  +L FL E+  RDHRK+ +E +LF   E   G  FW   G +I+ TL+  +R +
Sbjct: 311 DKKLMDAHLKFLAEASMRDHRKIGKEQELFLFNEMSPGSCFWLPHGTRIYNTLVDLLRTE 370

Query: 287 I-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
             K  YEE+ TP + +  LW+ SGHW +Y+ NMF  +   +T      F LKPMNCPGH 
Sbjct: 371 YRKRGYEEVITPNMYNSKLWETSGHWANYKENMFTFEVEKET------FGLKPMNCPGHC 424

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +F    +SYRELP R+A+FG ++RNE SG+L GL RVR F QDDAH+FCT +Q+ +E  
Sbjct: 425 LMFKSRERSYRELPWRVADFGVIHRNEFSGALSGLTRVRRFQQDDAHIFCTHDQIESEIE 484

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
            I N +  IY  FGFE   ++LSTRPEK VG    WD AE+ ++  L           N 
Sbjct: 485 NIFNFLQYIYGVFGFE-FKMELSTRPEKYVGKIETWDAAESKLESALKKWGG------NW 537

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK---CHPVM 522
            +  G+GAFYGPK + ++ DA+ R  QC TIQ+DF LP+RF   + +   +      PVM
Sbjct: 538 EINAGDGAFYGPKIDIMISDALRRWHQCATIQLDFQLPNRFELEFKSKDQDSESYERPVM 597

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSI 582
           IHRA+ GS+ER   I+ E+F G  P WLSP Q +V  +      YA+++ N L       
Sbjct: 598 IHRAILGSVERMTAILTEHFAGKWPFWLSPRQVLVVPVGVKYQGYAEDVRNKLHDAGFYA 657

Query: 583 ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           + D    T+  K+R   + K   I I G++E +E+S+ IR
Sbjct: 658 DVDLTGNTLQKKVRNGQMLKYNFIFIVGEQEMNEKSVNIR 697


>gi|238924616|ref|YP_002938132.1| threonyl-tRNA synthetase [Eubacterium rectale ATCC 33656]
 gi|238876291|gb|ACR75998.1| threonyl-tRNA synthetase [Eubacterium rectale ATCC 33656]
          Length = 676

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 238/656 (36%), Positives = 367/656 (55%), Gaps = 32/656 (4%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K+T  DGS K +    +  ++A+ IS  LA+ A A  ++G++ DL   + ++ ++ IIT
Sbjct: 20  MKITLKDGSSKEYSEAKSVYEIAKDISEGLARAACAGEVDGEIVDLRTVLDKDCTLNIIT 79

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
             D   L VIRH+ +H++A+AV++++P+ ++ IGP I+DGFYYDFD  QPFS ++L  +E
Sbjct: 80  ASDEEGLRVIRHTASHVLAQAVKNLFPDAKITIGPAIDDGFYYDFDS-QPFSREDLDALE 138

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M++II +     +  L  E+A +  + K E YKVE++E +P  E ++ Y QG + DLC
Sbjct: 139 AEMKKIIKQGHEITRFTLPREEAIKFMKEKDEPYKVELIEELPEGEEISFYDQGGFVDLC 198

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+ ST  VK F KL   + AYWRGDSN+  L RIYGTA+N +++L  +L  +EE++K
Sbjct: 199 AGPHLMSTKGVKAF-KLTASSMAYWRGDSNKARLHRIYGTAYNKKEDLKAHLERMEEAKK 257

Query: 244 RDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD------DYEEINT 296
           RDH KL REM+LF   +  G G+     KG K    +I  ++R I+D       Y    T
Sbjct: 258 RDHNKLGREMELFTTVDVIGQGLPLMMPKGTK----MIMKLQRWIEDLEDKEWGYVRTKT 313

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD--LRTFALKPMNCPGHVAVFNHGLKS 354
           P +    L++ SGHWD Y   MF +    D  KD      AL+PM CP    V+     S
Sbjct: 314 PLMAKSDLYKISGHWDHYLDGMFVLG---DPEKDGEEEVMALRPMTCPFQYYVYKAKQHS 370

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YR+LP R+ E  +++RNE SG +HGL RVR FT  + H     +Q   E     NL   +
Sbjct: 371 YRDLPYRMGETSTLFRNEDSGEMHGLTRVRQFTISEGHNVIRPDQCEEELKACFNLNRYV 430

Query: 415 YKDFGFEK-IMVKLST----RPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL 469
            K  G E  +  +LS       EK +G D  W+  + +++ +L       ++ +      
Sbjct: 431 LKVLGLENDVTYRLSKWDPKNTEKYLGDDEYWNSTQEVLRNIL------IEENVPFVEAD 484

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG 529
           GE AFYGPK +   K+  G++    TIQ+D  +   F+ +Y++ + +K  P +IHR   G
Sbjct: 485 GEAAFYGPKIDIQAKNVYGKEDTMVTIQLDCAIAENFDLYYIDQNGDKIRPYIIHRTSLG 544

Query: 530 SIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE 589
             ER +  +IE++ G  P WL P Q  V  I+    +YA+++A+ LK + + +  D R E
Sbjct: 545 CYERTLAWLIEHYAGKFPTWLCPEQVRVLPISEKYADYAKKVADELKRNDVDVTVDNRAE 604

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIR-RFGSTTTQKVSLLDAIPILTKE 644
            I YKIRE  + K+P +++ G  E ++ ++ +R RF      K  L D I  + KE
Sbjct: 605 KIGYKIREARMDKLPYMLVVGADEEADGTVSVRSRFEGNEGVK-PLSDFIDQICKE 659


>gi|67538984|ref|XP_663266.1| hypothetical protein AN5662.2 [Aspergillus nidulans FGSC A4]
 gi|40743565|gb|EAA62755.1| hypothetical protein AN5662.2 [Aspergillus nidulans FGSC A4]
 gi|259484865|tpe|CBF81451.1| TPA: threonyl-tRNA synthetase, putative (AFU_orthologue;
           AFUA_4G13700) [Aspergillus nidulans FGSC A4]
          Length = 722

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 225/655 (34%), Positives = 358/655 (54%), Gaps = 44/655 (6%)

Query: 4   DIKLTFPDGSIKNFPVHA---TGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           ++ L   DG+    P  A   T + + + + + ++   V   ++G++ DL  P+  E ++
Sbjct: 56  NVTLQLGDGNTTTIPSKAWETTPAQLLKHVPKEISADIVIAKVDGQLWDLGRPLEGECTV 115

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF--DKEQPFSSD 117
             +   DP    V  HS AH + EA +  +    ++ GP    GF+YD      +     
Sbjct: 116 SYVPFSDPEGREVFWHSSAHCLGEACECEYG-CMLSHGPPTPQGFFYDMAMPDNRVVKES 174

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +   ++ +  +I      F +  ++ E  R++F   K  YK+  ++ +   E  T+YR G
Sbjct: 175 DWKTLDNRANKIFKEKQSFDRLEVTKENLRKMFAYSK--YKLHYIDKLVTGEKSTVYRCG 232

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
              DLCRGPH++STG+VK F K+M+ + AY+ GD N   L RI G A+  ++++ ++L F
Sbjct: 233 TLVDLCRGPHIQSTGKVKTF-KIMQNSSAYFLGDQNNDSLQRIRGVAFPDKKQMAEHLKF 291

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINT 296
           LEE+EKR+H ++A+E +LF   +   G  F    G +IF  L S +R +  K  Y+E+ T
Sbjct: 292 LEEAEKRNHLRIAKEQELFFFDDVSPGCPFLLPNGVRIFNALQSLLRSEYRKRGYQEVQT 351

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P + D  +W+ SGHW  Y+ +MF +        + R +ALKPMNCPGH  +F H  +SYR
Sbjct: 352 PNMYDVGIWKTSGHWAHYKDDMFKLDV------EKREWALKPMNCPGHFVLFGHRERSYR 405

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ELP+R+A+FG ++RNE SG+LHGL RVR F QDD H+FCT +Q+ +E   + + + SIY 
Sbjct: 406 ELPLRIADFGVLHRNEASGALHGLTRVRKFQQDDTHIFCTHDQIESEIEGLFDFLQSIYG 465

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
            FGF    +KLSTRPEK +G    W+ AE  +K  +   K       +  +  G+GAFYG
Sbjct: 466 LFGF-TFKLKLSTRPEKYLGELETWNYAEEQLKKAMTKFKGD-----DWTIDEGDGAFYG 519

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE-------------------- 516
           PK +  + DA+ R++QC TIQ+D+  P  F   Y+                         
Sbjct: 520 PKIDITIADALKREFQCATIQLDYQAPLNFKLEYMTGEKTQATQEEAKKEADPKSNEPAP 579

Query: 517 -KCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLL 575
            +  PV+IHRA+ GS ERF+GI+ E+F G  P W+SP Q ++  +  +  +YA+E+  +L
Sbjct: 580 GRARPVVIHRAIIGSFERFLGIITEHFGGKWPFWISPRQVLIVPVMPAVNDYAREVQKIL 639

Query: 576 KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
           ++  L ++ D    T+  KIR   + +   I++ G +E   RS+ IR    T++Q
Sbjct: 640 QNDKLYVDVDVTGNTLQKKIRTGQLAQYNFILVVGAEEKESRSVNIRNRDDTSSQ 694


>gi|309364909|emb|CAP23504.2| CBR-TARS-1 protein [Caenorhabditis briggsae AF16]
          Length = 729

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 224/624 (35%), Positives = 352/624 (56%), Gaps = 23/624 (3%)

Query: 5   IKLTFPDGSI-KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           I++T PDG + +      T  ++AE IS+ LA+ AV   +NG V DL  P     ++E++
Sbjct: 86  IEITLPDGKVHEGKSWRTTPFEIAERISKGLAEAAVISKVNGVVWDLDRPFEGNATLELL 145

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQ 121
             ED  +  V  HS AH++ EA++  +    +  GP I++GFYYD + + +    ++  +
Sbjct: 146 KFEDDEAKQVFWHSSAHVLGEAMER-YCGGHLCYGPPIQEGFYYDMWHENRTICPEDFPK 204

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           I++ ++  +     F +  ++ E   E+F  K   +KV I++        T+YR G   D
Sbjct: 205 IDQIVKAAVKDKQKFERLEMTKEDLLEMF--KYNEFKVRIIKEKINTPKTTVYRCGPLID 262

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHVR TG+VK    + K + +YW G ++   L R+YG ++   ++L ++    EE+
Sbjct: 263 LCRGPHVRHTGKVKAM-AITKNSSSYWEGKADAESLQRLYGISFPDSKQLKEWQKLQEEA 321

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
            KRDHRKL +E DLF   +   G  FW+ KG  I+  L+ ++R++ +   + E+ TP + 
Sbjct: 322 AKRDHRKLGKEQDLFFFHQLSPGSAFWYPKGAHIYNKLVDFIRKQYRRRGFTEVITPNMY 381

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ LW+ SGHW  Y  +MF ++   +       F LKPMNCPGH  +F H   +Y ELP 
Sbjct: 382 NKKLWETSGHWQHYSEDMFKIEVEKEE------FGLKPMNCPGHCLMFGHMPHTYNELPF 435

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY-KDFG 419
           R A+FG ++RNE SG+L GL RVR F QDDAH+FC ++Q+  E  +  + +   Y K FG
Sbjct: 436 RFADFGVLHRNEMSGALTGLTRVRRFQQDDAHIFCRQDQISEEIKQCLDFLEYAYEKVFG 495

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F    + LSTRPE  +G    WD AE  +   L+             +  G+GAFYGPK 
Sbjct: 496 F-TFKLNLSTRPEGFLGKIETWDQAEADLTEALNATGRK------WALNPGDGAFYGPKI 548

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +  ++DA+ R++QC TIQ+DF LP++F+  Y +   EK  PVMIHRAV GS+ER   I+ 
Sbjct: 549 DITIQDALKRNFQCATIQLDFQLPNQFDLSYFDEKGEKQRPVMIHRAVLGSVERMTAILT 608

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FRNETINYKIREH 598
           E++ G  P WLSP Q  + T+  S  +YA+++   +      +E D F  +T+N ++R  
Sbjct: 609 ESYGGKWPFWLSPRQCKIITVHESVRDYAKDVKKQIFDAGFEVEYDEFCGDTMNKQVRNS 668

Query: 599 SIKKIPIIIICGDKEASERSIGIR 622
            + +   I++ G KE    ++ +R
Sbjct: 669 QLAQFNFILVLGAKEKENGTVNVR 692


>gi|302386675|ref|YP_003822497.1| threonyl-tRNA synthetase [Clostridium saccharolyticum WM1]
 gi|302197303|gb|ADL04874.1| threonyl-tRNA synthetase [Clostridium saccharolyticum WM1]
          Length = 653

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 231/638 (36%), Positives = 355/638 (55%), Gaps = 26/638 (4%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           +K+T  DGS+K +    +  D+A  IS  LA+ A A  ++GKV DL   +  + S+ I+T
Sbjct: 1   MKITLKDGSVKEYEHAMSVIDIASDISEGLARNACAGEVDGKVVDLRTVIDGDCSLSILT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
             DP  L+  RH+ +HI+A+AV+ ++P+ ++AIGP IE+GFYYDFD    FS ++L +IE
Sbjct: 61  VSDPAGLSAYRHTASHILAQAVKRLYPQAKLAIGPSIENGFYYDFDIPS-FSREDLDKIE 119

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M++II       +  L  E+A +  E K E YKVE+++ +P    ++ YRQGE+ DLC
Sbjct: 120 DEMKKIIKEGVKIERFTLPREEAIKFMEEKGEPYKVELIQDLPEGAEISFYRQGEFTDLC 179

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+ +T  +K + KL+  +GAYWRG     ML+R+YGTA+  ++EL ++L +L   + 
Sbjct: 180 AGPHLMNTKSIKAY-KLISSSGAYWRGSEKNAMLTRVYGTAFAKKEELNEHLEYLASIKN 238

Query: 244 RDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLD 301
           RDH KL R++++F   +  G G+     KG KI QTL  ++   + K  Y    TP +  
Sbjct: 239 RDHNKLGRDLEIFATVDVIGQGLPLLMPKGAKIVQTLQRWIEDEEEKRGYMRTKTPLMAK 298

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + L+  S HWD Y+  MF +   +    D   FAL+PM CP    V+    KSYR+LP R
Sbjct: 299 KDLYIISDHWDHYKEGMFVLGNEE---TDDEVFALRPMTCPFQYYVYKQSQKSYRDLPCR 355

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM---FNECLKIHNLIISIYKDF 418
             E  +++RNE SG +HGL RVR FT  + H+    +Q+   F  C+ +    ++     
Sbjct: 356 YGETSTLFRNEDSGEMHGLTRVRQFTISEGHLIVRPDQIEEEFKGCVDLAKYCLTT---L 412

Query: 419 GFE-KIMVKLS----TRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           G E  +  ++S       +  +G+  +WD+ E++M+ +LD I       I      GE A
Sbjct: 413 GLEGDVTYRMSKWDPNNADHYLGTPEMWDEVEDMMRKILDHIG------IQYTEAAGEAA 466

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +   K+  G++    TIQ+D  L  RF+  +V+    K  P +IHR   G  ER
Sbjct: 467 FYGPKLDIQAKNVYGKEDTMITIQLDMFLAERFDMSFVDKDGTKKRPYIIHRTSMGCYER 526

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
            +  +IE ++G  P WL P Q  +  I+    EYA ++A  LK + +    D R E I Y
Sbjct: 527 TLAWLIEKYEGAFPTWLCPEQVRILPISEKYHEYAGKVAAQLKENGILATVDERAEKIGY 586

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIR-RFGSTTTQ 630
           KIRE  + K+P +++ G KE  E  + +R RF     Q
Sbjct: 587 KIREARLSKLPYMLVVGQKEEEEGVVSVRSRFNGDEGQ 624


>gi|323337178|gb|EGA78432.1| Ths1p [Saccharomyces cerevisiae Vin13]
          Length = 734

 Score =  414 bits (1063), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 235/640 (36%), Positives = 351/640 (54%), Gaps = 39/640 (6%)

Query: 5   IKLTFPDGSIKNFPV-HATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-----EGS 58
           +K+   DG++K       T  D+A+ IS+SLA +     +NG++ DL  P       E  
Sbjct: 75  LKIVLKDGAVKEATSWETTPMDIAKGISKSLADRLCISKVNGQLWDLDRPFEGEANEEIK 134

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF---------- 108
           +E++  E      V  HS AH++ E+ +       + +GP  +DGF+Y+           
Sbjct: 135 LELLDFESDEGKKVFWHSSAHVLGESCECHLG-AHICLGPPTDDGFFYEMAVRDSMKDIS 193

Query: 109 -DKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES-IP 166
              E+  S  +   +E   + +I +   F +  +S E   ++F   K  YK  ++++ +P
Sbjct: 194 ESPERTVSQADFPGLEGVAKNVIKQKQKFERLVMSKEDLLKMFHYSK--YKTYLVQTKVP 251

Query: 167 AKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWN 226
                T+YR G+  DLC GPH+  TG++K F KL+K +  Y+ GD+    L R+YG ++ 
Sbjct: 252 DGGATTVYRCGKLIDLCVGPHIPHTGRIKAF-KLLKNSSCYFLGDATNDSLQRVYGISFP 310

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
            ++ +  +L FL E+  RDHRK+ +E +LF   E   G  FW   G +I+ TL+  +R +
Sbjct: 311 DKKLMDAHLKFLAEASMRDHRKIGKEQELFLFNEMSPGSCFWLPHGTRIYNTLVDLLRTE 370

Query: 287 I-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
             K  YEE+ TP + +  LW+ SGHW +Y+ NMF  +   +T      F LKPMNCPGH 
Sbjct: 371 YRKRGYEEVITPNMYNSKLWETSGHWANYKENMFTFEVEKET------FGLKPMNCPGHC 424

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +F    +SYRELP R+A+FG ++RNE SG+L GL RVR F QDDAH+FCT +Q+ +E  
Sbjct: 425 LMFKSRERSYRELPWRVADFGVIHRNEFSGALSGLTRVRRFQQDDAHIFCTHDQIESEIE 484

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
            I N +  IY  FGFE   ++LSTRPEK VG    WD AE+ ++  L   K      IN 
Sbjct: 485 NIFNFLQYIYGVFGFE-FKMELSTRPEKYVGKIETWDAAESKLESALK--KWGGNWEINA 541

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK---CHPVM 522
               G+GAFYGPK + ++ DA+ R  QC TIQ+DF LP+RF   + +   +      PVM
Sbjct: 542 ----GDGAFYGPKIDIMISDALRRWHQCATIQLDFQLPNRFELEFKSKDQDSESYERPVM 597

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSI 582
           IHRA+ GS+ER   I+ E+F G  P WLSP Q +V  +      YA+++ N L       
Sbjct: 598 IHRAILGSVERMTAILTEHFAGKWPFWLSPRQVLVVPVGVKYQGYAEDVRNKLHDAGFYA 657

Query: 583 ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           + D    T+  K+R   + K   I I G++E +E+S+ IR
Sbjct: 658 DVDLTGNTLQKKVRNGQMLKYNFIFIVGEQEMNEKSVNIR 697


>gi|268532388|ref|XP_002631322.1| C. briggsae CBR-TRS-1 protein [Caenorhabditis briggsae]
          Length = 704

 Score =  414 bits (1063), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 224/624 (35%), Positives = 352/624 (56%), Gaps = 23/624 (3%)

Query: 5   IKLTFPDGSI-KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           I++T PDG + +      T  ++AE IS+ LA+ AV   +NG V DL  P     ++E++
Sbjct: 62  IEITLPDGKVHEGKSWRTTPFEIAERISKGLAEAAVISKVNGVVWDLDRPFEGNATLELL 121

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQ 121
             ED  +  V  HS AH++ EA++  +    +  GP I++GFYYD + + +    ++  +
Sbjct: 122 KFEDDEAKQVFWHSSAHVLGEAMER-YCGGHLCYGPPIQEGFYYDMWHENRTICPEDFPK 180

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           I++ ++  +     F +  ++ E   E+F  K   +KV I++        T+YR G   D
Sbjct: 181 IDQIVKAAVKDKQKFERLEMTKEDLLEMF--KYNEFKVRIIKEKINTPKTTVYRCGPLID 238

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHVR TG+VK    + K + +YW G ++   L R+YG ++   ++L ++    EE+
Sbjct: 239 LCRGPHVRHTGKVKAM-AITKNSSSYWEGKADAESLQRLYGISFPDSKQLKEWQKLQEEA 297

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
            KRDHRKL +E DLF   +   G  FW+ KG  I+  L+ ++R++ +   + E+ TP + 
Sbjct: 298 AKRDHRKLGKEQDLFFFHQLSPGSAFWYPKGAHIYNKLVDFIRKQYRRRGFTEVITPNMY 357

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ LW+ SGHW  Y  +MF ++   +       F LKPMNCPGH  +F H   +Y ELP 
Sbjct: 358 NKKLWETSGHWQHYSEDMFKIEVEKEE------FGLKPMNCPGHCLMFGHMPHTYNELPF 411

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY-KDFG 419
           R A+FG ++RNE SG+L GL RVR F QDDAH+FC ++Q+  E  +  + +   Y K FG
Sbjct: 412 RFADFGVLHRNEMSGALTGLTRVRRFQQDDAHIFCRQDQISEEIKQCLDFLEYAYEKVFG 471

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F    + LSTRPE  +G    WD AE  +   L+             +  G+GAFYGPK 
Sbjct: 472 F-TFKLNLSTRPEGFLGKIETWDQAEADLTEALNATGRK------WALNPGDGAFYGPKI 524

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +  ++DA+ R++QC TIQ+DF LP++F+  Y +   EK  PVMIHRAV GS+ER   I+ 
Sbjct: 525 DITIQDALKRNFQCATIQLDFQLPNQFDLSYFDEKGEKQRPVMIHRAVLGSVERMTAILT 584

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FRNETINYKIREH 598
           E++ G  P WLSP Q  + T+  S  +YA+++   +      +E D F  +T+N ++R  
Sbjct: 585 ESYGGKWPFWLSPRQCKIITVHESVRDYAKDVKKQIFDAGFEVEYDEFCGDTMNKQVRNS 644

Query: 599 SIKKIPIIIICGDKEASERSIGIR 622
            + +   I++ G KE    ++ +R
Sbjct: 645 QLAQFNFILVLGAKEKENGTVNVR 668


>gi|151943085|gb|EDN61420.1| threonyl-tRNA synthetase [Saccharomyces cerevisiae YJM789]
          Length = 734

 Score =  414 bits (1063), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 233/640 (36%), Positives = 350/640 (54%), Gaps = 39/640 (6%)

Query: 5   IKLTFPDGSIKNFPV-HATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-----EGS 58
           +K+   DG++K       T  D+A+ IS+SLA +     +NG++ DL  P       E  
Sbjct: 75  LKIVLKDGAVKEATSWETTPMDIAKGISKSLADRLCISKVNGQLWDLDRPFEGEANEEIK 134

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF---------- 108
           +E++  E      V  HS AH++ E+ +       + +GP  +DGF+Y+           
Sbjct: 135 LELLDFESDEGKKVFWHSSAHVLGESCECHLG-AHICLGPPTDDGFFYEMAVRDSMKDIS 193

Query: 109 -DKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES-IP 166
              E+  S  +   +E   + +I +   F +  +S E   ++F   K  YK  ++++ +P
Sbjct: 194 ESPERTVSQADFPGLEGVAKNVIKQKQKFERLVMSKEDLLKMFHYSK--YKTYLVQTKVP 251

Query: 167 AKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWN 226
                T+YR G+  DLC GPH+  TG++K F KL+K +  Y+ GD+    L R+YG ++ 
Sbjct: 252 DGGATTVYRCGKLIDLCVGPHIPHTGRIKAF-KLLKNSSCYFLGDATNDSLQRVYGISFP 310

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
            ++ +  +L FL E+  RDHRK+ +E +LF   E   G  FW   G +I+ TL+  +R +
Sbjct: 311 DKKLMDAHLKFLAEASMRDHRKIGKEQELFLFNEMSPGSCFWLPHGTRIYNTLVDLLRTE 370

Query: 287 I-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
             K  YEE+ TP + +  LW+ SGHW +Y+ NMF  +   +T      F LKPMNCPGH 
Sbjct: 371 YRKRGYEEVITPNMYNSKLWETSGHWANYKENMFTFEVEKET------FGLKPMNCPGHC 424

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +F    +SYRELP R+A+FG ++RNE SG+L GL RVR F QDDAH+FCT +Q+ +E  
Sbjct: 425 LMFKSRERSYRELPWRVADFGVIHRNEFSGALSGLTRVRRFQQDDAHIFCTHDQIESEIE 484

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
            I N +  IY  FGFE   ++LSTRPEK VG    WD AE+ ++  L           N 
Sbjct: 485 NIFNFLQYIYGVFGFE-FKMELSTRPEKYVGKIETWDAAESKLESALKKWGG------NW 537

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK---CHPVM 522
            +  G+GAFYGPK + ++ DA+ R  QC TIQ+DF LP+RF   + +   +      PVM
Sbjct: 538 EINAGDGAFYGPKIDIMISDALRRWHQCATIQLDFQLPNRFELEFKSKDQDSESYERPVM 597

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSI 582
           IHRA+ GS+ER   I+ E+F G  P WLSP Q +V  +      YA+++ N L       
Sbjct: 598 IHRAILGSVERMTAILTEHFAGKWPFWLSPRQVLVVPVGVKYQGYAEDVRNKLHDAGFYA 657

Query: 583 ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           + D    T+  K+R   + K   I I G++E +E+S+ IR
Sbjct: 658 DVDLTGNTLQKKVRNGQMLKYNFIFIVGEQEMNEKSVNIR 697


>gi|45185649|ref|NP_983365.1| ACL039Wp [Ashbya gossypii ATCC 10895]
 gi|44981367|gb|AAS51189.1| ACL039Wp [Ashbya gossypii ATCC 10895]
          Length = 724

 Score =  414 bits (1063), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 242/652 (37%), Positives = 357/652 (54%), Gaps = 40/652 (6%)

Query: 1   MP-SDIKLTFPDGSIKNFPVHATGS-DVAESISRSLAKKAVAVAINGKVCDLSDPVREGS 58
           MP + I +   DGS K      T   D+A+ IS+S A +     +NG++ DL  P+ EGS
Sbjct: 62  MPRAAISVVLKDGSEKPAVAWETSPMDIAQQISKSFADRQCISKVNGELWDLERPL-EGS 120

Query: 59  ------IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF---- 108
                 +E    E      V  HS AH++ EA +       + +GP  +DGF+Y+F    
Sbjct: 121 EGDHLKLEFFDFESNEGRRVFWHSAAHVLGEACECNLG-AHICLGPPTDDGFFYEFACKD 179

Query: 109 --DKEQP---FSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE 163
             D + P    S  +   +E   ++ I     F +  ++ E   ++F   K  YK  +++
Sbjct: 180 SMDPDAPERTVSQADFPNLETVAKQAIKEKQRFERLVMTKEDLLKMFHYSK--YKTYLVQ 237

Query: 164 S-IPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYG 222
           + IP   + T+YR G+  DLC GPH+  TG++K F KL+K +  Y+ GDS    L R+YG
Sbjct: 238 TKIPDGGSTTVYRSGKLIDLCVGPHIPHTGRIKAF-KLLKNSSCYFLGDSENDTLQRVYG 296

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISY 282
            A+  ++ +  +L FLEE+ KRDHRK+ RE +LF   E   G  FW   G +I+  L+  
Sbjct: 297 IAFPDKKLMDAHLKFLEEAAKRDHRKIGREQELFMFNEMSPGSCFWLPHGTRIYNNLVEL 356

Query: 283 MRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           +R +  K  YEE+ TP + +  LW+ SGHW +Y+ NMF  +   ++      F LKPMNC
Sbjct: 357 LRNEYRKRGYEEVITPNMYNSKLWETSGHWANYKENMFTFEVEKES------FGLKPMNC 410

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
           PGH  +F    +SYRELP R+A+FG ++RNE SG+L GL RVR F QDDAH+FC ++Q+ 
Sbjct: 411 PGHCVMFKSRERSYRELPWRVADFGVIHRNEFSGALSGLTRVRRFQQDDAHIFCAQDQIE 470

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E   + + +  +Y  FGFE   ++LSTRPE  VG    W++AE  ++  L+  K     
Sbjct: 471 TEIEGLFDFLKYVYGVFGFE-FKLELSTRPENYVGDLETWNNAEARLESALN--KWGGDW 527

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV---NSHSEKC 518
            IN     G+GAFYGPK + ++ DA+ R  QC TIQ+DF LP+RF   Y    N  +   
Sbjct: 528 EINE----GDGAFYGPKIDIMISDALKRWHQCATIQLDFQLPNRFELEYKGKGNDENAYE 583

Query: 519 HPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSH 578
            PVMIHRA+ GS+ER   I+ E++ G  P WLSP Q +V  +     +YAQ+I + L   
Sbjct: 584 RPVMIHRALLGSVERMTAILTEHYAGKWPFWLSPRQVLVVPVGVKYQDYAQQIRDKLVGA 643

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
               + D  + T+  K+R   + K   I + G++E +E S+ IR    T  Q
Sbjct: 644 GFYADADLGSNTLQKKVRTGQMLKYNFIFVVGEQEMNENSVNIRNRDVTDLQ 695


>gi|332844839|ref|XP_003314929.1| PREDICTED: probable threonyl-tRNA synthetase 2, cytoplasmic isoform
           3 [Pan troglodytes]
          Length = 766

 Score =  414 bits (1063), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 232/592 (39%), Positives = 341/592 (57%), Gaps = 22/592 (3%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAH 79
            T   VA  IS+ LA+  V   +NG++ DL  P+  + S+E++T ++  + AV  HS AH
Sbjct: 179 TTPYQVAAEISQELAESTVIAKVNGELWDLDRPLEGDSSLELLTFDNEEAQAVYWHSSAH 238

Query: 80  IMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQIEKKMQEIIARDSPFLK 138
           I+ EA++ ++    +  G  IE+GFYYD F +++  SS EL+ +E   + II    PF +
Sbjct: 239 ILGEAME-LYYGGHLCYGLPIENGFYYDVFIEDRAVSSTELSALENICKAIIKEKQPFER 297

Query: 139 QYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFF 198
             +S E   E+F+  K  +K  IL         T+YR G   DLC+GPHVR TG++K   
Sbjct: 298 LEVSKEILLEMFKYNK--FKCRILNEKVNTATTTVYRCGPLIDLCKGPHVRHTGKIKTI- 354

Query: 199 KLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI 258
           K+ K +  YW G+     L RIYG ++   + +  +  F EE++ RDHRK+ +E +LF  
Sbjct: 355 KIFKNSSTYWEGNPEMETLQRIYGISFPDNKMMRDWEKFQEEAKNRDHRKIGKEQELFFF 414

Query: 259 AEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRAN 317
            +   G  F+  +G  I+ TL  ++R +  K D+ E+ +P + +  LW+ SGHW  Y  N
Sbjct: 415 HDLSPGSCFFLPRGAFIYNTLTDFIREEYHKRDFTEVLSPNMYNSKLWEASGHWQHYSEN 474

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           MF  +   DT      FALKPMNCPGH  +F H  +S+RE+P+R A+FG ++RNE SG+L
Sbjct: 475 MFTFEIEKDT------FALKPMNCPGHCLMFAHRPRSWREMPIRFADFGVLHRNELSGTL 528

Query: 378 HGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGS 437
            GL RVR F QDDAH+FCT EQ+  E       + S+Y  FGF    + LSTRPE  +G 
Sbjct: 529 SGLTRVRRFQQDDAHIFCTVEQIEEEIKGCLRFLQSVYSTFGF-SFQLNLSTRPENFLGE 587

Query: 438 DALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ 497
             +W++AE  ++  L  +      ++N     G+GAFYGPK +  +KDAIGR  QC TIQ
Sbjct: 588 IEMWNEAEKQLQNSL--MDFGEPWKMNP----GDGAFYGPKIDIKIKDAIGRYHQCATIQ 641

Query: 498 VDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI 556
           +DF LP RFN  YV+    +K  PV+IHRA+ GS+ER I I+ EN+ G  P WLSP Q +
Sbjct: 642 LDFQLPIRFNLTYVSKDGDDKKRPVIIHRAILGSVERMIAILSENYGGKWPFWLSPRQVM 701

Query: 557 VTTITSSAVEYAQEIANLLKSHHLSIETDF-RNETINYKIREHSIKKIPIII 607
           V  +  +  +YA ++++         + D   N T+N KIR   + +   I+
Sbjct: 702 VIPVGPTCEKYALQVSSEFFEEGFMADVDLDHNCTLNKKIRNAQLAQYNFIL 753


>gi|190406293|gb|EDV09560.1| threonyl-tRNA synthetase [Saccharomyces cerevisiae RM11-1a]
 gi|259147177|emb|CAY80430.1| Ths1p [Saccharomyces cerevisiae EC1118]
 gi|323333154|gb|EGA74554.1| Ths1p [Saccharomyces cerevisiae AWRI796]
 gi|323354584|gb|EGA86420.1| Ths1p [Saccharomyces cerevisiae VL3]
          Length = 734

 Score =  414 bits (1063), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 233/640 (36%), Positives = 350/640 (54%), Gaps = 39/640 (6%)

Query: 5   IKLTFPDGSIKNFPV-HATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-----EGS 58
           +K+   DG++K       T  D+A+ IS+SLA +     +NG++ DL  P       E  
Sbjct: 75  LKIVLKDGAVKEATSWETTPMDIAKGISKSLADRLCISKVNGQLWDLDRPFEGEANEEIK 134

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF---------- 108
           +E++  E      V  HS AH++ E+ +       + +GP  +DGF+Y+           
Sbjct: 135 LELLDFESDEGKKVFWHSSAHVLGESCECHLG-AHICLGPPTDDGFFYEMAVRDSMKDIS 193

Query: 109 -DKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES-IP 166
              E+  S  +   +E   + +I +   F +  +S E   ++F   K  YK  ++++ +P
Sbjct: 194 ESPERTVSQADFPGLEGVAKNVIKQKQKFERLVMSKEDLLKMFHYSK--YKTYLVQTKVP 251

Query: 167 AKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWN 226
                T+YR G+  DLC GPH+  TG++K F KL+K +  Y+ GD+    L R+YG ++ 
Sbjct: 252 DGGATTVYRCGKLIDLCVGPHIPHTGRIKAF-KLLKNSSCYFLGDATNDSLQRVYGISFP 310

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
            ++ +  +L FL E+  RDHRK+ +E +LF   E   G  FW   G +I+ TL+  +R +
Sbjct: 311 DKKLMDAHLKFLAEASMRDHRKIGKEQELFLFNEMSPGSCFWLPHGTRIYNTLVDLLRTE 370

Query: 287 I-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
             K  YEE+ TP + +  LW+ SGHW +Y+ NMF  +   +T      F LKPMNCPGH 
Sbjct: 371 YRKRGYEEVITPNMYNSKLWETSGHWANYKENMFTFEVEKET------FGLKPMNCPGHC 424

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +F    +SYRELP R+A+FG ++RNE SG+L GL RVR F QDDAH+FCT +Q+ +E  
Sbjct: 425 LMFKSRERSYRELPWRVADFGVIHRNEFSGALSGLTRVRRFQQDDAHIFCTHDQIESEIE 484

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
            I N +  IY  FGFE   ++LSTRPEK VG    WD AE+ ++  L           N 
Sbjct: 485 NIFNFLQYIYGVFGFE-FKMELSTRPEKYVGKIETWDAAESKLESALKKWGG------NW 537

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK---CHPVM 522
            +  G+GAFYGPK + ++ DA+ R  QC TIQ+DF LP+RF   + +   +      PVM
Sbjct: 538 EINAGDGAFYGPKIDIMISDALRRWHQCATIQLDFQLPNRFELEFKSKDQDSESYERPVM 597

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSI 582
           IHRA+ GS+ER   I+ E+F G  P WLSP Q +V  +      YA+++ N L       
Sbjct: 598 IHRAILGSVERMTAILTEHFAGKWPFWLSPRQVLVVPVGVKYQGYAEDVRNKLHDAGFYA 657

Query: 583 ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           + D    T+  K+R   + K   I I G++E +E+S+ IR
Sbjct: 658 DVDLTGNTLQKKVRNGQMLKYNFIFIVGEQEMNEKSVNIR 697


>gi|14318437|ref|NP_116578.1| Ths1p [Saccharomyces cerevisiae S288c]
 gi|730881|sp|P04801|SYTC_YEAST RecName: Full=Threonyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|556869|emb|CAA86092.1| threonyl-tRNA synthetase [Saccharomyces cerevisiae]
 gi|285812573|tpg|DAA08472.1| TPA: Ths1p [Saccharomyces cerevisiae S288c]
          Length = 734

 Score =  414 bits (1063), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 233/640 (36%), Positives = 350/640 (54%), Gaps = 39/640 (6%)

Query: 5   IKLTFPDGSIKNFPV-HATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-----EGS 58
           +K+   DG++K       T  D+A+ IS+SLA +     +NG++ DL  P       E  
Sbjct: 75  LKIVLKDGAVKEATSWETTPMDIAKGISKSLADRLCISKVNGQLWDLDRPFEGEANEEIK 134

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF---------- 108
           +E++  E      V  HS AH++ E+ +       + +GP  +DGF+Y+           
Sbjct: 135 LELLDFESDEGKKVFWHSSAHVLGESCECHLG-AHICLGPPTDDGFFYEMAVRDSMKDIS 193

Query: 109 -DKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES-IP 166
              E+  S  +   +E   + +I +   F +  +S E   ++F   K  YK  ++++ +P
Sbjct: 194 ESPERTVSQADFPGLEGVAKNVIKQKQKFERLVMSKEDLLKMFHYSK--YKTYLVQTKVP 251

Query: 167 AKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWN 226
                T+YR G+  DLC GPH+  TG++K F KL+K +  Y+ GD+    L R+YG ++ 
Sbjct: 252 DGGATTVYRCGKLIDLCVGPHIPHTGRIKAF-KLLKNSSCYFLGDATNDSLQRVYGISFP 310

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
            ++ +  +L FL E+  RDHRK+ +E +LF   E   G  FW   G +I+ TL+  +R +
Sbjct: 311 DKKLMDAHLKFLAEASMRDHRKIGKEQELFLFNEMSPGSCFWLPHGTRIYNTLVDLLRTE 370

Query: 287 I-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
             K  YEE+ TP + +  LW+ SGHW +Y+ NMF  +   +T      F LKPMNCPGH 
Sbjct: 371 YRKRGYEEVITPNMYNSKLWETSGHWANYKENMFTFEVEKET------FGLKPMNCPGHC 424

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +F    +SYRELP R+A+FG ++RNE SG+L GL RVR F QDDAH+FCT +Q+ +E  
Sbjct: 425 LMFKSRERSYRELPWRVADFGVIHRNEFSGALSGLTRVRRFQQDDAHIFCTHDQIESEIE 484

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
            I N +  IY  FGFE   ++LSTRPEK VG    WD AE+ ++  L           N 
Sbjct: 485 NIFNFLQYIYGVFGFE-FKMELSTRPEKYVGKIETWDAAESKLESALKKWGG------NW 537

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK---CHPVM 522
            +  G+GAFYGPK + ++ DA+ R  QC TIQ+DF LP+RF   + +   +      PVM
Sbjct: 538 EINAGDGAFYGPKIDIMISDALRRWHQCATIQLDFQLPNRFELEFKSKDQDSESYERPVM 597

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSI 582
           IHRA+ GS+ER   I+ E+F G  P WLSP Q +V  +      YA+++ N L       
Sbjct: 598 IHRAILGSVERMTAILTEHFAGKWPFWLSPRQVLVVPVGVKYQGYAEDVRNKLHDAGFYA 657

Query: 583 ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           + D    T+  K+R   + K   I I G++E +E+S+ IR
Sbjct: 658 DVDLTGNTLQKKVRNGQMLKYNFIFIVGEQEMNEKSVNIR 697


>gi|326773248|ref|ZP_08232531.1| threonine--tRNA ligase [Actinomyces viscosus C505]
 gi|326636478|gb|EGE37381.1| threonine--tRNA ligase [Actinomyces viscosus C505]
          Length = 683

 Score =  414 bits (1063), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 240/670 (35%), Positives = 356/670 (53%), Gaps = 51/670 (7%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI-EIIT 63
           I++T  DG+ +      TG+ + +   +      VA+ +NG+  DL   V  G++ E IT
Sbjct: 7   IEITL-DGAPRTIEAGITGALLLQDTVKK--DGVVAMRVNGEPWDLERQVPAGAVVEPIT 63

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
                 L ++RHS  H+MA+AVQ ++P+V + IGP I DGFYYDF      + + L +IE
Sbjct: 64  LSSEDGLNILRHSATHVMAQAVQEMFPDVNLGIGPFITDGFYYDFGAIDAVTPEMLREIE 123

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKE----------NVTL 173
           K+M+ I+     F+++ ++  + RE  E   + YK+E++ +  A             +T+
Sbjct: 124 KRMKRIVKEGQRFVRRDITEAEGRE--ELADQPYKLELITTKGAGAEGASVEVGAGGLTM 181

Query: 174 Y----RQG--EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNT 227
           Y    R G   W DLCRGPH+ ST  + + F L K + AYW+GD +   L RIYGTAW +
Sbjct: 182 YDNVRRDGTVAWTDLCRGPHLPSTRLIGQGFALTKSSSAYWKGDQSGDSLQRIYGTAWAS 241

Query: 228 QQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RR 285
           + +L  Y   L E+ KRDHRKL  E+DL+   E+ G G++ +H KG  +   +  Y+  R
Sbjct: 242 KDDLKAYQTRLAEAAKRDHRKLGAELDLYSFPEEIGPGLVVFHPKGAMLRHQIEQYVVDR 301

Query: 286 KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD-------DTIKDLRTFALKP 338
            +   ++ ++TP++    L+  SGH   Y   MF    AD       +  K  + + LK 
Sbjct: 302 HLDYGFDFVHTPEISKGGLFHTSGHLPYYADTMFPPMLADEERDAEGNITKAGQEYYLKA 361

Query: 339 MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE 398
           MNCP H  +F    +SYRELP+R  E G  YR E SG +HGL R+RGFTQDD+H +CT E
Sbjct: 362 MNCPMHNLIFRSRGRSYRELPLRFFEMGHDYRYEKSGVVHGLTRMRGFTQDDSHTYCTPE 421

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE------KRVGSDALWDDAENIMKGVL 452
           Q   E     +  +SI K FG     ++LSTR E      K +GSDA W  A   ++   
Sbjct: 422 QAGEEIRAQIDFFLSILKAFGLTDFYLELSTRDEDGAKKDKFIGSDADWTAATQALQDAC 481

Query: 453 DTIKNSSQDRINTGVLL----GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
           D           +G+ +    G  AFYGPK    +KDAIGR WQ  TIQ DFN P RF+ 
Sbjct: 482 DA----------SGLEVVPDPGGAAFYGPKVSVQVKDAIGRTWQMSTIQYDFNQPERFDL 531

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYA 568
            Y  +      P+MIH A  GS+ERFIG++ E++ G  P WLSP+Q  +  +  +   Y 
Sbjct: 532 EYTAADGTHQRPIMIHSAKLGSVERFIGVLTEHYAGAFPAWLSPVQVRLIPVAEAFDAYV 591

Query: 569 QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
            ++A  L++  + +E D  ++    KIR  S  KIP  +I G ++A   ++  R      
Sbjct: 592 DDVAAQLRAQGVRVEVDHSDDRFGKKIRNTSKDKIPFTLIAGGEDAEAGAVSFRFRDGQQ 651

Query: 629 TQKVSLLDAI 638
           T  V + +A+
Sbjct: 652 TNGVPVKEAV 661


>gi|207344345|gb|EDZ71519.1| YIL078Wp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 689

 Score =  414 bits (1063), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 235/640 (36%), Positives = 351/640 (54%), Gaps = 39/640 (6%)

Query: 5   IKLTFPDGSIKNFPV-HATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-----EGS 58
           +K+   DG++K       T  D+A+ IS+SLA +     +NG++ DL  P       E  
Sbjct: 30  LKIVLKDGAVKEATSWETTPMDIAKGISKSLADRLCISKVNGQLWDLDRPFEGEANEEIK 89

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF---------- 108
           +E++  E      V  HS AH++ E+ +       + +GP  +DGF+Y+           
Sbjct: 90  LELLDFESDEGKKVFWHSSAHVLGESCECHLG-AHICLGPPTDDGFFYEMAVRDSMKDIS 148

Query: 109 -DKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES-IP 166
              E+  S  +   +E   + +I +   F +  +S E   ++F   K  YK  ++++ +P
Sbjct: 149 ESPERTVSQADFPGLEGVAKNVIKQKQKFERLVMSKEDLLKMFHYSK--YKTYLVQTKVP 206

Query: 167 AKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWN 226
                T+YR G+  DLC GPH+  TG++K F KL+K +  Y+ GD+    L R+YG ++ 
Sbjct: 207 DGGATTVYRCGKLIDLCVGPHIPHTGRIKAF-KLLKNSSCYFLGDATNDSLQRVYGISFP 265

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
            ++ +  +L FL E+  RDHRK+ +E +LF   E   G  FW   G +I+ TL+  +R +
Sbjct: 266 DKKLMDAHLKFLAEASMRDHRKIGKEQELFLFNEMSPGSCFWLPHGTRIYNTLVDLLRTE 325

Query: 287 I-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
             K  YEE+ TP + +  LW+ SGHW +Y+ NMF  +   +T      F LKPMNCPGH 
Sbjct: 326 YRKRGYEEVITPNMYNSKLWETSGHWANYKENMFTFEVEKET------FGLKPMNCPGHC 379

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +F    +SYRELP R+A+FG ++RNE SG+L GL RVR F QDDAH+FCT +Q+ +E  
Sbjct: 380 LMFKSRERSYRELPWRVADFGVIHRNEFSGALSGLTRVRRFQQDDAHIFCTHDQIESEIE 439

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
            I N +  IY  FGFE   ++LSTRPEK VG    WD AE+ ++  L   K      IN 
Sbjct: 440 NIFNFLQYIYGVFGFE-FKMELSTRPEKYVGKIETWDAAESKLESALK--KWGGNWEINA 496

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK---CHPVM 522
               G+GAFYGPK + ++ DA+ R  QC TIQ+DF LP+RF   + +   +      PVM
Sbjct: 497 ----GDGAFYGPKIDIMISDALRRWHQCATIQLDFQLPNRFELEFKSKDQDSESYERPVM 552

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSI 582
           IHRA+ GS+ER   I+ E+F G  P WLSP Q +V  +      YA+++ N L       
Sbjct: 553 IHRAILGSVERMTAILTEHFAGKWPFWLSPRQVLVVPVGVKYQGYAEDVRNKLHDAGFYA 612

Query: 583 ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           + D    T+  K+R   + K   I I G++E +E+S+ IR
Sbjct: 613 DVDLTGNTLQKKVRNGQMLKYNFIFIVGEQEMNEKSVNIR 652


>gi|4619|emb|CAA26666.1| unnamed protein product [Saccharomyces cerevisiae]
          Length = 734

 Score =  414 bits (1063), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 233/640 (36%), Positives = 350/640 (54%), Gaps = 39/640 (6%)

Query: 5   IKLTFPDGSIKNFPV-HATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-----EGS 58
           +K+   DG++K       T  D+A+ IS+SLA +     +NG++ DL  P       E  
Sbjct: 75  LKIVLKDGAVKEATSWETTPMDIAKGISKSLADRLCISKVNGQLWDLDRPFEGEANEEIK 134

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF---------- 108
           +E++  E      V  HS AH++ E+ +       + +GP  +DGF+Y+           
Sbjct: 135 LELLDFESDEGKKVFWHSSAHVLGESCECHLG-AHICLGPPTDDGFFYEMAVRDSMKDIS 193

Query: 109 -DKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES-IP 166
              E+  S  +   +E   + +I +   F +  +S E   ++F   K  YK  ++++ +P
Sbjct: 194 ESPERTVSQADFPGLEGVAKNVIKQKQKFERLVMSKEDLLKMFHYSK--YKTYLVQTKVP 251

Query: 167 AKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWN 226
                T+YR G+  DLC GPH+  TG++K F KL+K +  Y+ GD+    L R+YG ++ 
Sbjct: 252 DGGATTVYRCGKLIDLCVGPHIPHTGRIKAF-KLLKNSSCYFLGDATNDSLQRVYGISFP 310

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
            ++ +  +L FL E+  RDHRK+ +E +LF   E   G  FW   G +I+ TL+  +R +
Sbjct: 311 DKKLMDAHLKFLAEASMRDHRKIGKEQELFLFNEMSPGSCFWLPHGTRIYNTLVDLLRTE 370

Query: 287 I-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
             K  YEE+ TP + +  LW+ SGHW +Y+ NMF  +   +T      F LKPMNCPGH 
Sbjct: 371 YRKRGYEEVITPNMYNSKLWETSGHWANYKENMFTFEVEKET------FGLKPMNCPGHC 424

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +F    +SYRELP R+A+FG ++RNE SG+L GL RVR F QDDAH+FCT +Q+ +E  
Sbjct: 425 LMFKSRERSYRELPWRVADFGVIHRNEFSGALSGLTRVRRFQQDDAHIFCTHDQIESEIE 484

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
            I N +  IY  FGFE   ++LSTRPEK VG    WD AE+ ++  L           N 
Sbjct: 485 NIFNFLQYIYGVFGFE-FEMELSTRPEKYVGKIETWDAAESKLESALKKWGG------NW 537

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK---CHPVM 522
            +  G+GAFYGPK + ++ DA+ R  QC TIQ+DF LP+RF   + +   +      PVM
Sbjct: 538 EINAGDGAFYGPKIDIMISDALRRWHQCATIQLDFQLPNRFELEFKSKDQDSESYERPVM 597

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSI 582
           IHRA+ GS+ER   I+ E+F G  P WLSP Q +V  +      YA+++ N L       
Sbjct: 598 IHRAILGSVERMTAILTEHFAGKWPFWLSPRQVLVVPVGVKYQGYAEDVRNKLHDAGFYA 657

Query: 583 ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           + D    T+  K+R   + K   I I G++E +E+S+ IR
Sbjct: 658 DVDLTGNTLQKKVRNGQMLKYNFIFIVGEQEMNEKSVNIR 697


>gi|308509394|ref|XP_003116880.1| CRE-TARS-1 protein [Caenorhabditis remanei]
 gi|308241794|gb|EFO85746.1| CRE-TARS-1 protein [Caenorhabditis remanei]
          Length = 749

 Score =  413 bits (1062), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 227/636 (35%), Positives = 354/636 (55%), Gaps = 23/636 (3%)

Query: 5   IKLTFPDGSIKNFPV-HATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           I++T PDG + +      T  ++AE IS+ LA+ AV   +NG V DL  P     ++E++
Sbjct: 106 IEITLPDGKVHDGKSWRTTPFEIAEKISKGLAEAAVISKVNGVVWDLDRPFEGNATLELL 165

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQ 121
             ED  +  V  HS AH++ EA++  +    +  GP IE+GFYYD + + +  S ++  +
Sbjct: 166 KFEDDEAKQVFWHSSAHVLGEAMER-YCGGHLCYGPPIEEGFYYDMWHENRTISPEDFPK 224

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           I++ ++  +     F +  ++ E   E+F  K   +KV I++        T+YR G   D
Sbjct: 225 IDQIVKAAVKDKQKFERLEMTKENLLEMF--KYNEFKVRIIKEKINTPKTTVYRCGPLID 282

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHVR TG+VK    + K + +YW G ++   L R+YG ++   ++L ++    EE+
Sbjct: 283 LCRGPHVRHTGKVKAM-AITKNSSSYWEGKADAESLQRLYGISFPDSKQLKEWQKLQEEA 341

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
            KRDHRKL +E DLF       G  FW+ KG  I+  L+ ++R++ +   + E+ TP + 
Sbjct: 342 AKRDHRKLGKEQDLFFFHPLSPGSAFWYPKGAHIYNKLVDFIRKQYRRRGFTEVITPNMY 401

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ LW+ SGHW  Y  +MF ++   +       F LKPMNCPGH  +F H   +Y ELP 
Sbjct: 402 NKKLWETSGHWQHYSEDMFKIEVEKEE------FGLKPMNCPGHCLMFGHMPHTYNELPF 455

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY-KDFG 419
           R A+FG ++RNE SG+L GL RVR F QDDAH+FC K+Q+  E  +  + +   Y K FG
Sbjct: 456 RFADFGVLHRNEMSGALTGLTRVRRFQQDDAHIFCRKDQIAEEIKQCLDFLEYAYEKVFG 515

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F    + LSTRPE  +G    W+ AE  +   L+             +  G+GAFYGPK 
Sbjct: 516 F-TFKLNLSTRPEGFLGEIETWNQAEADLTEALNATGRK------WALNPGDGAFYGPKI 568

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +  ++DA+ R++QC TIQ+DF LP++F+  Y +   EK  PVMIHRAV GS+ER   I+ 
Sbjct: 569 DITIQDALKRNFQCATIQLDFQLPNQFDLSYFDEKGEKQRPVMIHRAVLGSVERMTAILT 628

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIREH 598
           E++ G  P WLSP Q  + T+  S  +YA ++   +      +E D    +T+N ++R  
Sbjct: 629 ESYGGKWPFWLSPRQCKIITVHESVRDYASDVKKKIFEAGFEVEYDATCGDTMNKQVRNS 688

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
            + +   I++ G KE    ++ +R   +    +V L
Sbjct: 689 QLAQFNFILVIGAKEKENGTVNVRTRDNAVRGEVPL 724


>gi|225026720|ref|ZP_03715912.1| hypothetical protein EUBHAL_00972 [Eubacterium hallii DSM 3353]
 gi|224955955|gb|EEG37164.1| hypothetical protein EUBHAL_00972 [Eubacterium hallii DSM 3353]
          Length = 650

 Score =  413 bits (1062), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 234/656 (35%), Positives = 361/656 (55%), Gaps = 38/656 (5%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPE 65
           +   DGS K +    +  D+A+ IS  LA+ A A  +NG+  DL   V E S + I+T  
Sbjct: 3   IRLKDGSEKEYAQPMSVLDIAKDISEGLARNACAGQVNGETVDLRTVVSEDSDLNILTFN 62

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D       RH+ +H++A+AV+ ++PE ++AIGP IEDGFYYDFD   P + ++L  IEK+
Sbjct: 63  DEEGKLAFRHTASHVLAQAVKRLYPEAKLAIGPAIEDGFYYDFDM-APLTREDLDAIEKE 121

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+++I  + P  +  L  E+A    + K E YKVE++E +P    ++ Y+QG++ DLC G
Sbjct: 122 MKKVIKENPPIERYELPREEAIAYMKEKDEPYKVELIEDLPEDATISFYKQGDFTDLCAG 181

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PH+ S   +K F KL   +GAYWRG+ N  ML+RIYGTA+  + +L + L +LEE + RD
Sbjct: 182 PHLMSVKPIKAF-KLTASSGAYWRGNENNKMLTRIYGTAYTKKADLEERLKYLEEIKLRD 240

Query: 246 HRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKDD---YEEINTPQVLD 301
           H +L REM+LF   +  G G+     KG KI QTL  ++   ++D+   Y    TP +  
Sbjct: 241 HNRLGREMELFTTVDVIGQGLPLLLPKGAKIIQTLQRWIE-DLEDNEWGYVRTKTPLMAK 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             L++ SGHWD Y+  MF +    D   D    AL+PM CP     + +  KSYR+LP R
Sbjct: 300 SDLYKISGHWDHYKEGMFVL---GDEENDKEVLALRPMTCPFQYYCYKNTQKSYRDLPYR 356

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE---CLKIHNLIISIYKDF 418
           ++E  +++RNE SG +HGL RVR FT  + H+    +Q  +E   CL +    + +    
Sbjct: 357 MSETSTLFRNEDSGEMHGLTRVRQFTISEGHLIIRPDQTNDELKGCLHLAQYCLGV---L 413

Query: 419 GFEK-IMVKLS----TRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL---- 469
           G +  +  +LS       EK +G D  W+  ++ ++ +L          ++ GV      
Sbjct: 414 GVQDDVTYRLSKWDPNNKEKYLGDDEYWETTQDAIRNIL----------VDQGVPFVEAE 463

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG 529
           GE AFYGPK +   K+  G++    TIQ+D  +   F+ +Y++ + +K  P +IHR   G
Sbjct: 464 GEAAFYGPKIDIQAKNVYGKEDTMITIQLDCAIAENFDMYYIDQNGDKQRPYVIHRTSMG 523

Query: 530 SIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE 589
             ER +  +IE + G  P WL P Q  V  I+    +YA+E+   LK + +    D R+E
Sbjct: 524 CYERTLAWLIEKYAGKFPTWLCPEQVRVLPISEKFADYAEEVNKELKRNGILSTVDNRSE 583

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIR-RFGSTTTQKVSLLDAIPILTKE 644
            I YKIRE  ++K+P +++ G +E     + +R RF     QK  L D I  + +E
Sbjct: 584 KIGYKIREARLQKLPYMLVVGAQEQETGKVSVRSRFAGDEGQK-DLKDFISAICEE 638


>gi|325068893|ref|ZP_08127566.1| threonine--tRNA ligase [Actinomyces oris K20]
          Length = 683

 Score =  413 bits (1062), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 240/670 (35%), Positives = 357/670 (53%), Gaps = 51/670 (7%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI-EIIT 63
           I++T  DG+ +     +TG  + +   +      VA+ +NG+  DL   V  G++ E IT
Sbjct: 7   IEITL-DGAPRTIEAGSTGVLLLQDAVKK--DGVVAMRVNGEPWDLERQVPAGAVVEPIT 63

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
                 L ++RHS  H+MA+AVQ ++P+V + IGP I DGFYYDF      + + L +IE
Sbjct: 64  LASEDGLNILRHSATHVMAQAVQEMFPDVNLGIGPFITDGFYYDFGAIDAVTPEMLREIE 123

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKE----------NVTL 173
           K+M+ I+     F+++ ++ ++  E  E   + YK+E++ +  A             +T+
Sbjct: 124 KRMKRIVKEGQRFVRRDITEDQGSE--ELADQPYKLELITTKGAGAEGASVEVGAGGLTM 181

Query: 174 Y----RQG--EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNT 227
           Y    R G   W DLCRGPH+ ST  + + F L K + AYW+GD +   L RIYGTAW T
Sbjct: 182 YDNVRRDGTVAWTDLCRGPHLPSTRLIGQGFALTKSSSAYWKGDQSGDSLQRIYGTAWAT 241

Query: 228 QQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK 286
           + +L  Y   L E+ KRDHRKL  E+DL+   E+ G G++ +H KG  +   +  Y+  +
Sbjct: 242 KDDLKAYQTRLAEAAKRDHRKLGAELDLYSFPEEIGPGLVVFHPKGAMLRHQIEQYVVDR 301

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD-------DTIKDLRTFALKP 338
            +D  ++ ++TP++    L+  SGH   Y   MF    AD       +  K  + + LK 
Sbjct: 302 HQDYGFDFVHTPEISKGGLFHTSGHLPYYADTMFPPMLADEERDAEGNITKAGQEYYLKA 361

Query: 339 MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE 398
           MNCP H  +F    +SYRELP+R  E G  YR E SG +HGL R+RGFTQDD+H +CT E
Sbjct: 362 MNCPMHNLIFRSRGRSYRELPLRFFEMGHDYRYEKSGVVHGLTRMRGFTQDDSHTYCTPE 421

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE------KRVGSDALWDDAENIMKGVL 452
           Q   E     +  +SI K FG     ++LSTR E      K +GSDA W  A   ++   
Sbjct: 422 QAGEEIRAQIDFFLSILKAFGLTDFYLELSTRDEDGAKKDKFIGSDADWAAATQALQDAC 481

Query: 453 DTIKNSSQDRINTGVLL----GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
           D           +G+ +    G  AFYGPK    +KDAIGR WQ  TIQ DFN P RF+ 
Sbjct: 482 DA----------SGLEVVPDPGGAAFYGPKVSVQVKDAIGRTWQMSTIQYDFNQPERFDL 531

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYA 568
            Y  +      P+MIH A  GS+ERFIG++ E++ G  P WLSP+Q  +  +  +   Y 
Sbjct: 532 EYTAADGTHQRPIMIHSAKLGSVERFIGVLTEHYAGAFPAWLSPVQVRLIPVAEAFDAYV 591

Query: 569 QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
            ++A  L++  + +E D  ++    KIR  S  KIP  +I G ++A   ++  R      
Sbjct: 592 DDVAAQLRAQGVRVEVDHSDDRFGKKIRNASKDKIPFTLIAGGEDAEAGAVSFRFRDGQQ 651

Query: 629 TQKVSLLDAI 638
           T  V + +A+
Sbjct: 652 TNGVPVKEAV 661


>gi|213389878|gb|ACJ46005.1| threonyl tRNA synthetase [Palm lethal yellowing phytoplasma]
          Length = 641

 Score =  413 bits (1062), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 228/650 (35%), Positives = 384/650 (59%), Gaps = 25/650 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I +      I++FP   T  ++      +L  K +A   N ++ +L+  + + G +EI+T
Sbjct: 2   INIKLNKNLIQSFPCKITPIEIIRQNYFNLDSKPIAALFNNELIELNREIDQNGCLEIMT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQI 122
            +D RS+ ++ HS AH++A+AV+ I+P+  + IGP I++GFYYD D  +   S + L +I
Sbjct: 62  IKDQRSIEILNHSTAHLLAQAVKRIFPKSLLNIGPTIKEGFYYDIDFLDYHISENSLIEI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK M  I  R   +    ++ ++A ELF +    YK+++LE I  +  V++Y QGE+FDL
Sbjct: 122 EKMMHLISKRKIRYYSYEINIKEAYELFSN--NPYKIQLLEEI-QESKVSVYFQGEFFDL 178

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRG H+ +T  ++ F KL+K++G+Y +G+S    L+RIYG ++   +EL  YL  LEE +
Sbjct: 179 CRGIHLINTNIIQNF-KLLKISGSYLKGNSLNKKLTRIYGISFFHPKELKNYLKLLEERK 237

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVL 300
           ++DH+ + +E + F +  D G G   W  KG  I + +  Y+  ++++ DY+ + TP + 
Sbjct: 238 QKDHKNINKEQEFFMLTPDVGLGFPLWLPKGATIRRIIERYIVNKELEYDYQHVYTPVLA 297

Query: 301 DQHLWQQSGHWDSYRANMFAV-KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           +  L+Q SGH   Y+ NMF + K  +D         L+PMNCP H+ +F   L+SY++LP
Sbjct: 298 NIELYQTSGHLKLYKENMFPIMKLQND-----EKIVLRPMNCPHHMMIFKKKLRSYKDLP 352

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
            ++AE G ++R E SG++ GL R R  T +DAH+F T+ Q+ NE +KI N I  +YKDF 
Sbjct: 353 FKIAELGMMHRYEHSGAVSGLQRTRAMTLNDAHIFITENQIENEIIKIINFIFEVYKDFN 412

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
             +    LSTR     +K   ++ +W  +E I+K +L  +K   ++ +      G+ AFY
Sbjct: 413 ITEYYFNLSTRDVNNKKKYFENELIWQRSEFILKNILTELKIPFKESV------GDAAFY 466

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +  A+  +    T+Q+DF LP +FN  YV S +++ +P++IHRA+  ++ERF+
Sbjct: 467 GPKIDIQVLTALNNEETLSTVQLDFLLPKKFNLTYVGSDNKEHNPILIHRAIISTLERFV 526

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITS-SAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             +IE  KG  PLWL+P+Q ++  I +   ++Y Q+I  + K ++   E + ++ +++YK
Sbjct: 527 AFLIEKNKGFFPLWLAPVQVVLIPINNIKYLKYTQKINKIFKKNNFRSEINDKDNSLSYK 586

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IRE    KIP  I+ G+KE    ++  R + S  +Q VS+ + I I  K+
Sbjct: 587 IRESQKNKIPYQIVIGEKELLNSTLTFREYRSNLSQTVSIEEFIDIFNKK 636


>gi|160878906|ref|YP_001557874.1| threonyl-tRNA synthetase [Clostridium phytofermentans ISDg]
 gi|160427572|gb|ABX41135.1| threonyl-tRNA synthetase [Clostridium phytofermentans ISDg]
          Length = 652

 Score =  413 bits (1061), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 236/662 (35%), Positives = 367/662 (55%), Gaps = 41/662 (6%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K+T  DGS+K +       D+A+ IS  LA+ A A  ++GKV DL   V ++  + I+T
Sbjct: 1   MKITLKDGSVKEYSESMQIIDIAKDISEGLARMACAAELDGKVVDLRTEVSKDAELSILT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
             D    A  RH+ +H++A+AV+ ++P+ ++AIGP I+ GFYYDFD   PF    L  +E
Sbjct: 61  FNDDGGKAAYRHTTSHVLAQAVKRLYPDAKIAIGPSIDTGFYYDFDV-APFDRAALDALE 119

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           ++M++II   +   +  L   +A +  E K+E YKVE++  +P    ++ Y QG++ DLC
Sbjct: 120 QEMKKIIKEGAEITRFTLPRAEAIKFMEEKEEPYKVELIRDLPEDSVISFYSQGDFVDLC 179

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+ ST  +K   KL+  +GAYWRG     ML+R+YGTA+    +L ++L  LE+ +K
Sbjct: 180 AGPHLMSTKNIKAI-KLINSSGAYWRGSEKNKMLTRVYGTAFTKNADLEEFLNHLEDIKK 238

Query: 244 RDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKDD-----YEEINTP 297
           RDH KL REM+LF   +  G G+     KG K+ QTL    +R I+D+     Y    TP
Sbjct: 239 RDHNKLGREMELFATVDVIGQGLPLLMPKGAKMIQTL----QRWIEDEEERRGYMRTKTP 294

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +  + L++ S HW+ Y+  MF +   D+  ++   FAL+PM CP    V+    KSYR+
Sbjct: 295 LLAKKDLYEISDHWNHYKEGMFVL--GDEEDENAEVFALRPMTCPFQYYVYKQSQKSYRD 352

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM---FNECLKIHNLIISI 414
           LP R  E  +++RNE SG +HGL RVR FT  + H+  T EQ+   F  C+ +    ++ 
Sbjct: 353 LPCRYGETSTLFRNEDSGEMHGLTRVRQFTISEGHLIVTPEQLEEEFKGCVDLAKYCLTT 412

Query: 415 YKDFGF-EKIMVKLS----TRPEKRVGSDALWDDAENIMKGVLDTI--KNSSQDRINTGV 467
               G  + +  +LS        K +G++  W+  +N+M+ +L+ I    + +D      
Sbjct: 413 ---LGLADDVTYRLSKWDPNNQGKYLGNEETWNKVQNMMRDILNHIGLDFTEED------ 463

Query: 468 LLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAV 527
             GE AFYGPK +   K+  G++    TIQ+D  L  RF+  Y++++ EK  P +IHR  
Sbjct: 464 --GEAAFYGPKLDIQAKNVYGKEDTMITIQLDMFLADRFDMTYIDANGEKKRPYIIHRTS 521

Query: 528 FGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR 587
            G  ER +  +IE + G  P WL P Q  +  I+    +YA+ +   L  + + +  D R
Sbjct: 522 MGCYERTLAWLIEKYAGKFPTWLCPEQVRILPISEKYSDYAKMVEKELLDNGVLVTVDNR 581

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRR--FGSTTTQKVS-LLDAI--PILT 642
            E I YKIRE  + ++P +++ G KEA E  + +R    G    +KVS  +DAI   I T
Sbjct: 582 AEKIGYKIREARLDRVPYMLVVGQKEAEEGLVSVRSRYLGDEGQKKVSDFVDAICKEIRT 641

Query: 643 KE 644
           KE
Sbjct: 642 KE 643


>gi|291398043|ref|XP_002715638.1| PREDICTED: threonyl-tRNA synthetase 2, mitochondrial [Oryctolagus
           cuniculus]
          Length = 718

 Score =  413 bits (1061), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 227/635 (35%), Positives = 348/635 (54%), Gaps = 28/635 (4%)

Query: 5   IKLTFPDGS-IKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEII 62
           IK++ P G  +     + T   +A+ IS +LA  AVA  +NG++ DL  P+   S +  +
Sbjct: 61  IKISLPGGQKVDAVAWNTTPYQLAQQISSTLADTAVAAQVNGELYDLERPLETDSDLRFL 120

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF--DKEQPFSSDELA 120
           T + P   AV  HS  H++  A +     V +  GP  E GFY+DF   KE+     EL 
Sbjct: 121 TFDSPEGKAVFWHSSTHVLGAAAEQFLGAV-LCRGPSTECGFYHDFFLGKERTVQGSELP 179

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            +E+  QE  A   PF +   S ++ R+LF  K   +K+ ++E        T+Y  G   
Sbjct: 180 VLERICQEFAASAQPFRRLEASRDQLRQLF--KDNPFKLHVIEEKVTGPQATVYGCGTLV 237

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+R TGQ+ +  KL+  + + WR       L R+ G ++ T   L  +  + E+
Sbjct: 238 DLCRGPHLRHTGQIGEI-KLLTNSSSLWRSSGLPETLQRVSGISFPTTALLRAWEAWREQ 296

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQV 299
           +E RDHR++ +E +LF   E   G  F+  +G +++  L++++R +     + E+ TP +
Sbjct: 297 AELRDHRRIGKEQELFFFHELSPGSCFFLPRGTRVYNALVAFIRAEYAHRGFSEVKTPTL 356

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADD-----------TIKDLRTFALKPMNCPGHVAVF 348
               LW++SGHW+ Y+ +MFA++ +D            T +   T ALKPMNCP H  +F
Sbjct: 357 FSTKLWEKSGHWEHYKEDMFALQPSDSDSSACSQSDHPTSQPPDTLALKPMNCPAHCLMF 416

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
            H  +S+RELP+RLA+FG+++R E SGSL GL R+R F QDDAH+FC  +Q+  E     
Sbjct: 417 AHRPRSWRELPLRLADFGALHRAEASGSLGGLTRLRCFQQDDAHIFCAPDQLEAEIYGCL 476

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
           + + S+Y   GF    + LSTRP   +G   LWD AE +++  L+             + 
Sbjct: 477 DFLRSVYAVLGF-SFHLALSTRPSGFLGEPCLWDQAEQLLQQSLEAFGEPWD------LS 529

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
            G+GAFYGPK +  L+DA+GR  QCGTIQ+DF LP RF+  Y         PV+IHRAV 
Sbjct: 530 PGDGAFYGPKIDVHLRDALGRPHQCGTIQLDFQLPLRFDLQYKGQAGNLERPVLIHRAVL 589

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR- 587
           GS+ER +G++ E+  G  PLWLSP Q  V  + +   EYA+E+   L++  L+ + D   
Sbjct: 590 GSVERLLGVLAESCGGKWPLWLSPFQVAVIPVGTEQEEYAREVQQTLQAAGLASDLDADP 649

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
             T++ ++R   +       + G KE S R++ +R
Sbjct: 650 GLTLSRRVRRAQLAHYNFQFVVGRKEQSNRTVNVR 684


>gi|262047409|ref|ZP_06020366.1| threonyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
 gi|260572383|gb|EEX28946.1| threonyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
          Length = 644

 Score =  413 bits (1061), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 227/640 (35%), Positives = 357/640 (55%), Gaps = 22/640 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS K+F    +  +VA SI+ SL K AV   +NG V  L   +  +  + I+T +
Sbjct: 5   ITLPDGSKKDFDKAVSVKEVASSIATSLGKAAVGAKVNGVVKPLDYEIDNDVEVAILTDK 64

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L ++R + A  +    ++ +PE+++      E GFY D DK+      EL ++EK 
Sbjct: 65  DEEGLDILRATAAFALEAVAKNKYPELRLGQHVADEGGFYVDTDKDDQIKVTELPELEKA 124

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M++++          +   +  ++F  K + YK ++L+ I A + V  Y+ G++ D    
Sbjct: 125 MEKLVKSGQAIEHVVMDKSELEDIF--KDDPYKTDLLKKIDA-DKVDAYKLGDFVDFGFD 181

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
             + +TG++K F KL+ VAGAYW G S+ PML RI+GTA+  +  L + L    E ++RD
Sbjct: 182 ALLPNTGKIKHF-KLLSVAGAYWLGKSSNPMLQRIFGTAFFKEAALKEDLKRRAEIKERD 240

Query: 246 HRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQH 303
           HR ++R++DLF +  + G+G+ +W  KG  I + +  Y+  R++ D Y+ + TP +++  
Sbjct: 241 HRTISRDLDLFFVDPKVGAGLPYWMPKGATIRRVVERYIIDREVADGYQHVYTPVLMNLD 300

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
            ++ SGHW  YR +MF        + D     L+PMNCP H+ ++ H ++SYR+LP+R+A
Sbjct: 301 AYKTSGHWAHYRDDMFPPM----DMGDGEMLELRPMNCPSHIQIYKHHIRSYRDLPLRVA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           E G ++R E SG+L GL RVR  T +D H F   +Q+  E  KI  LI+ +YKDF     
Sbjct: 357 ELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQVQTEFAKILKLIMDVYKDFDITDY 416

Query: 424 MVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
             +LS R     +K   +D +W+ ++ ++KG +D +     D +      GE AFYGPK 
Sbjct: 417 YFRLSYRDPKNTDKYFANDEMWERSQKMLKGAMDDL---GLDYVEAE---GEAAFYGPKL 470

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +   K A+G D    TIQ+DF LP RF   YV    E+  PVMIHR + G++ERFI  + 
Sbjct: 471 DIQTKTALGNDETMSTIQLDFMLPERFGLTYVGQDGEEHRPVMIHRGIVGTMERFIAYLT 530

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           E +KG  P WL+P+Q  +  +   A  EYA+++   L       E D RNE + YKIRE 
Sbjct: 531 EIYKGAFPTWLAPVQVEIIPVNLDAHGEYAEKVRQELAKRGFRAEVDTRNEKMGYKIRES 590

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
             +K+P  ++ GD+E    S+ +RR+G+      SL D I
Sbjct: 591 QTQKVPYTLVLGDEEMKNGSVNVRRYGTDEEISKSLTDFI 630


>gi|329667761|gb|AEB93709.1| threonyl-tRNA synthetase [Lactobacillus johnsonii DPC 6026]
          Length = 643

 Score =  413 bits (1061), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 228/640 (35%), Positives = 356/640 (55%), Gaps = 23/640 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPE 65
           +T PDGS K+F    +  ++A SI+ SL K AV   ING +  L   V E     IIT +
Sbjct: 5   VTLPDGSKKDFDKAVSVKELASSIATSLGKAAVGAKINGVMKPLDYIVDEDVEAAIITDK 64

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L ++R + A ++    +  +PE+++ +    E GF+ D DKE      EL ++EK 
Sbjct: 65  DEEGLDILRATAAFLLEAVAKRKYPELRLGMHEADEGGFFVDTDKEDQIKVTELPELEKA 124

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           MQ+ I          +   +  E+F  K + +K+++L+    ++ V +Y+ G++ D    
Sbjct: 125 MQKAIKNGEKIEYTSMKKSELEEIF--KDDQFKLDLLKD--EEDEVAVYKLGDFVDFGFD 180

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
             + +TG++K F KL+ VAGAYW G S+ PML RI+GTA+  +  L + L    E ++RD
Sbjct: 181 ALLPNTGKIKNF-KLLSVAGAYWLGKSSNPMLQRIFGTAFFKKAALDEDLKRRAEIKERD 239

Query: 246 HRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQH 303
           HR + R++DLF +  + G+G+ +W  KG  I + +  Y+  +++ D YE + TP +++  
Sbjct: 240 HRTIGRDLDLFFVDPKVGAGLPYWMPKGATIRRVVERYIVDKEVADGYEHVYTPVLMNVD 299

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
            ++ SGHW  YR +MF        + D     L+PMNCP H+ ++ H ++SYRELP+R+A
Sbjct: 300 AYKTSGHWAHYRDDMFPPM----DMGDGEMLELRPMNCPSHIQIYKHHIRSYRELPIRIA 355

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           E G ++R E SG+L GL RVR  T +D H F   +Q+  E  K+  LI+ +YKDF     
Sbjct: 356 ELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQIREEFAKVLKLIMDVYKDFDITDY 415

Query: 424 MVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
             +LS R     +K   +D +W+ +++++K  +D +     D +      GE AFYGPK 
Sbjct: 416 YFRLSYRDPKNTDKYYANDEMWETSQSMLKAAMDDL---GLDYVEAE---GEAAFYGPKL 469

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +   K A+G D    TIQ+DF LP RF   YV    E+  PVMIHR + G++ERFI  + 
Sbjct: 470 DIQTKTALGNDETMSTIQLDFMLPERFGLTYVGQDGEEHRPVMIHRGIVGTMERFIAYLT 529

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           E +KG  P WL+P+QA +  +   A  EYA ++   L       E D RNE + YKIRE 
Sbjct: 530 EIYKGAFPTWLAPVQAEIIPVNEEAHGEYADKVRAELAKRGFRAEVDHRNEKLGYKIRES 589

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
             +K+P  ++ GD+E +   + +RR+G+      SL D I
Sbjct: 590 QTQKVPYTLVLGDEEMNANGVNVRRYGTEEQISKSLDDFI 629


>gi|260589197|ref|ZP_05855110.1| threonine--tRNA ligase [Blautia hansenii DSM 20583]
 gi|260540278|gb|EEX20847.1| threonine--tRNA ligase [Blautia hansenii DSM 20583]
          Length = 658

 Score =  413 bits (1061), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 246/653 (37%), Positives = 368/653 (56%), Gaps = 27/653 (4%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPE 65
           +T  DGS K +    +  ++A  IS  LA+ A A  +NG+V DL   V E   + I+T  
Sbjct: 3   ITLKDGSKKEYAESKSVYEIALDISEGLARAACAGEVNGEVVDLRTQVSEDCELNILTAN 62

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D + LA +RH+ +H++AEAV++++PE ++AIGP I+ GFYYDFD E  FS +EL  +EK+
Sbjct: 63  DEKGLAALRHTASHVLAEAVKNLYPEAKLAIGPSIDTGFYYDFDHES-FSREELDALEKE 121

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M++II + +   +  +  E+A +  E K E YKVE+++ +P  E ++ Y QG++ DLC G
Sbjct: 122 MKKIIKKGAKIQRYTMPREEAIKFMEEKGEDYKVELIKDLPEGEEISFYSQGDFVDLCAG 181

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PH+ ST  VK F KL+  +GAYWRGD    MLSRIYGTA++ + EL +YL  LEE++KRD
Sbjct: 182 PHLMSTKGVKAF-KLISSSGAYWRGDEKNKMLSRIYGTAFSKKDELNEYLEQLEEAKKRD 240

Query: 246 HRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKDD---YEEINTPQVLD 301
           H KL REM LF   +  G G+     KG  + + L  ++   ++D+   Y    TP +  
Sbjct: 241 HNKLGREMGLFTTVDVIGQGLPLLMPKGVIMLKELQRWIE-DLEDNEWGYVRTKTPLMAK 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             L++ SGHWD Y+  MF +    D  KD   FAL+PM CP    V+     SYRELP+R
Sbjct: 300 NDLYKISGHWDHYKEGMFVL---GDEEKDKEVFALRPMTCPFQYYVYKANQHSYRELPIR 356

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
             E  +++RNE SG +HGL RVR FT  + H+    +QM  E      L     +  G E
Sbjct: 357 YGETSTLFRNEDSGEMHGLTRVRQFTISEGHLIVRPDQMVEEFKGCLALAKHCLETLGVE 416

Query: 422 K-IMVKLST----RPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           + +   LS       EK +G   +W++ E  ++ +L  +     + +      GE AFYG
Sbjct: 417 EDVTYHLSKWDPENKEKYIGEPEVWEETEGHIRNILTELGVPFVEDV------GEAAFYG 470

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK +   K+  G++    TIQ D  L  +F+ +Y++ + +K  P +IHR   G  ER + 
Sbjct: 471 PKVDINAKNVYGKEDTMITIQWDALLAEQFDMYYIDENGDKKRPYIIHRTSMGCYERTLA 530

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
            +IE + G  P WL P Q  V  I+    +YA E+   LK++ +    D R+E I YKIR
Sbjct: 531 WLIEKYAGLFPTWLCPEQVRVLPISEKYGDYANEVQKQLKANGIRSSVDNRSEKIGYKIR 590

Query: 597 EHSIKKIPIIIICGDKEASERSIGIR-RFGSTTTQKV--SLLDAI--PILTKE 644
           E  ++K+P +++ G KE  ++ + +R R+     QK     +DAI   I TKE
Sbjct: 591 EARLEKVPYMLVVGAKEEEDKVVSVRSRYLGDEGQKTLSEFIDAICKEIRTKE 643


>gi|50294994|ref|XP_449908.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49529222|emb|CAG62888.1| unnamed protein product [Candida glabrata]
          Length = 726

 Score =  413 bits (1061), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 237/641 (36%), Positives = 350/641 (54%), Gaps = 40/641 (6%)

Query: 5   IKLTFPDGSIKNFPV-HATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-----EGS 58
           I +   DG+ K       T  D+A  IS+SLA +     +NG + DL  P       E  
Sbjct: 66  ITIVLKDGAKKEATAWETTPMDIARGISKSLADRLCIAKVNGDLWDLERPFEGKENEEIK 125

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF--------DK 110
           +E+   E      V  HS AH++ EA +       + +GP  +DGF+Y+         DK
Sbjct: 126 LELFDFESDEGRRVFWHSSAHVLGEACECNLG-AHICLGPPTDDGFFYEMALKDTLKEDK 184

Query: 111 ---EQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFE-SKKEAYKVEILESIP 166
              E+  S  +   +E   + +I     F +  +S E   ++F  SK + Y V+    IP
Sbjct: 185 DAEERTISQADFPNLEGVAKNVIKEKQKFERLVMSKEDLLKMFHYSKFKTYLVQT--KIP 242

Query: 167 AKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWN 226
              + T+Y+ G+  DLC GPH+  TG++K F KL+K + +Y+ GD+N   L R+YG ++ 
Sbjct: 243 DGGSTTVYKCGKLIDLCVGPHIPHTGRIKAF-KLLKNSSSYFLGDANNESLQRVYGISFP 301

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
            ++ +  +L FL E+  RDHRK+ +E +LF   E   G  FW   G +I+ TL+  +R +
Sbjct: 302 DKKLMDAHLKFLAEASMRDHRKIGKEQELFLFNEMSPGSCFWLPHGTRIYNTLVDLLRSE 361

Query: 287 I-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
             K  YEE+ TP + +  LW+ SGHW +Y+ NMF  +   +T      F LKPMNCPGH 
Sbjct: 362 YRKRGYEEVITPNMYNSKLWETSGHWANYKENMFTFEVEKET------FGLKPMNCPGHC 415

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +F    +SYRELP R+A+FG ++RNE SG+L GL RVR F QDDAH+FCT++Q+  E  
Sbjct: 416 LMFKARERSYRELPWRVADFGVIHRNEFSGALSGLTRVRRFQQDDAHIFCTQDQIEQEIE 475

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
            I + +  +Y  FGFE   ++LSTRPEK VG    WD AE  ++  L+    + +  +N 
Sbjct: 476 NIFDFLKFMYGVFGFE-FKMELSTRPEKYVGELETWDAAEKKLENALNKWGGAWE--LNP 532

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH----PV 521
               G+GAFYGPK + ++ DA+ R  QC TIQ+DF LP RF   +    +E+      PV
Sbjct: 533 ----GDGAFYGPKIDIMISDALRRWHQCATIQLDFQLPQRFELEFKAKDTEESENYERPV 588

Query: 522 MIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLS 581
           MIHRA+ GS+ER   I+ E+F G  P WLSP Q +V  +     EYAQ++ + + +    
Sbjct: 589 MIHRAILGSVERMTAILTEHFAGKWPFWLSPRQILVVPVGVKYQEYAQQVRDKMHNAGFY 648

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
            + D    T+  K+R   + K   I I G+ E +E S+ IR
Sbjct: 649 ADVDLTGNTLQKKVRTGQLMKYNFIFIVGETEMNENSVNIR 689


>gi|207742945|ref|YP_002259337.1| threonyl-trna synthetase protein [Ralstonia solanacearum IPO1609]
 gi|206594340|emb|CAQ61267.1| probable threonyl-trna synthetase protein [Ralstonia solanacearum
           IPO1609]
          Length = 379

 Score =  412 bits (1060), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 200/380 (52%), Positives = 271/380 (71%), Gaps = 9/380 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           I +T PDGS + FP   T ++VA+SI   LAK A+A  I+G + D S  + +   + I+T
Sbjct: 2   IAITLPDGSRREFPGPVTVAEVAQSIGAGLAKAALAGRIDGHLVDTSFKIEQSVDLAIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   L VIRHS AH++A AV+ + P+ QV IGP+IE+GFYYDF  ++PF+ ++L  IE
Sbjct: 62  DKDADGLDVIRHSTAHLLAYAVKELHPDAQVTIGPVIENGFYYDFAYKRPFTPEDLVAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           KKM E+  +D    ++  S  +A +LFE   E YK EI+ SIP  + + LYR+G + DLC
Sbjct: 122 KKMAELAKKDEKVTREVWSRNEAVKLFEGMGEKYKAEIIASIPEDQEIGLYREGSFVDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV STG++ K FKLMKVAGAYWRGDSN  ML RIYGTAW  +++   YL+ LEE+EK
Sbjct: 182 RGPHVPSTGKL-KVFKLMKVAGAYWRGDSNNEMLQRIYGTAWAKKEDQEAYLHMLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ E+  G++FWH KGW+I+Q +  YMR ++    Y E+ TPQV+D+
Sbjct: 241 RDHRKLGKQLDLFHLQEEAPGMVFWHPKGWQIWQAVEQYMRGRLAGAGYSEVRTPQVMDR 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW +Y+ NMF       T  + R +A+KPMNCPGHV +FNHGL+SYR+LP+RL
Sbjct: 301 TLWEHSGHWQNYKENMFV------TESEKREYAIKPMNCPGHVQIFNHGLRSYRDLPLRL 354

Query: 363 AEFGSVYRNEPSGSLHGLMR 382
           AEFG+ +RNEPSG+LHGL R
Sbjct: 355 AEFGANHRNEPSGALHGLKR 374


>gi|268319910|ref|YP_003293566.1| threonyl-tRNA synthetase 1 [Lactobacillus johnsonii FI9785]
 gi|262398285|emb|CAX67299.1| threonyl-tRNA synthetase 1 [Lactobacillus johnsonii FI9785]
          Length = 643

 Score =  412 bits (1060), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 228/640 (35%), Positives = 356/640 (55%), Gaps = 23/640 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPE 65
           +T PDGS K+F    +  ++A SI+ SL K AV   ING +  L   V E     IIT +
Sbjct: 5   VTLPDGSKKDFDKAVSVKELASSIATSLGKAAVGAKINGVMKPLDYIVDEDVDAAIITDK 64

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L ++R + A ++    +  +PE+++ +    E GF+ D DKE      EL ++EK 
Sbjct: 65  DEEGLDILRATAAFLLEAVAKRKYPELRLGMHEADEGGFFVDTDKEDQIKVTELPELEKA 124

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           MQ+ I          +   +  E+F  K + +K+++L+    ++ V +Y+ G++ D    
Sbjct: 125 MQKAIKNGEKIEYTSMKKSELEEIF--KDDQFKLDLLKD--EEDEVAVYKLGDFVDFGFD 180

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
             + +TG++K F KL+ VAGAYW G S+ PML RI+GTA+  +  L + L    E ++RD
Sbjct: 181 ALLPNTGKIKNF-KLLSVAGAYWLGKSSNPMLQRIFGTAFFKKAALDEDLKRRAEIKERD 239

Query: 246 HRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQH 303
           HR + R++DLF +  + G+G+ +W  KG  I + +  Y+  +++ D YE + TP +++  
Sbjct: 240 HRTIGRDLDLFFVDPKVGAGLPYWMPKGATIRRVVERYIVDKEVADGYEHVYTPVLMNVD 299

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
            ++ SGHW  YR +MF        + D     L+PMNCP H+ ++ H ++SYRELP+R+A
Sbjct: 300 AYKTSGHWAHYRDDMFPPM----DMGDGEMLELRPMNCPSHIQIYKHHIRSYRELPIRIA 355

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           E G ++R E SG+L GL RVR  T +D H F   +Q+  E  K+  LI+ +YKDF     
Sbjct: 356 ELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQIREEFAKVLKLIMDVYKDFDITDY 415

Query: 424 MVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
             +LS R     +K   +D +W+ +++++K  +D +     D +      GE AFYGPK 
Sbjct: 416 YFRLSYRDPKNTDKYYANDEMWEKSQSMLKAAMDDL---GLDYVEAE---GEAAFYGPKL 469

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +   K A+G D    TIQ+DF LP RF   YV    E+  PVMIHR + G++ERFI  + 
Sbjct: 470 DIQTKTALGNDETMSTIQLDFMLPERFGLTYVGQDGEEHRPVMIHRGIVGTMERFIAYLT 529

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           E +KG  P WL+P+QA +  +   A  EYA ++   L       E D RNE + YKIRE 
Sbjct: 530 EIYKGAFPTWLAPVQAEIIPVNEEAHGEYADKVRAELAKRGFRAEVDHRNEKLGYKIRES 589

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
             +K+P  ++ GD+E +   + +RR+G+      SL D I
Sbjct: 590 QTQKVPYTLVLGDEEMNANGVNVRRYGTEEQISKSLDDFI 629


>gi|71984184|ref|NP_001022033.1| Threonyl tRNA Synthetase family member (trs-1) [Caenorhabditis
           elegans]
 gi|1711653|sp|P52709|SYTC_CAEEL RecName: Full=Threonyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|3875006|emb|CAA93762.1| C. elegans protein C47D12.6a, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 725

 Score =  412 bits (1060), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 227/636 (35%), Positives = 357/636 (56%), Gaps = 23/636 (3%)

Query: 5   IKLTFPDGSIKNFPV-HATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           I++T PDG I        T  ++AE IS+ LA+ AV   +NG V DL  P      +E++
Sbjct: 82  IQITLPDGKIHEGKTWRTTPFEIAERISKGLAEAAVIAKVNGAVWDLDRPFEGNAKLELL 141

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQ 121
             +D  +  V  HS AH++ EA++  +    +  GP I++GFYYD + + +    D+  +
Sbjct: 142 KFDDDEAKQVFWHSSAHVLGEAMER-YCGGHLCYGPPIQEGFYYDMWHENRTICPDDFPK 200

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           I++ ++  +     F +  ++ E   E+F  K   +KV I+         T+YR G   D
Sbjct: 201 IDQIVKAAVKDKQKFERLEMTKEDLLEMF--KYNEFKVRIITEKIHTPKTTVYRCGPLID 258

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHVR TG+VK    + K + +YW G ++   L R+YG ++   ++L ++    EE+
Sbjct: 259 LCRGPHVRHTGKVKAM-AITKNSSSYWEGKADAESLQRLYGISFPDSKQLKEWQKLQEEA 317

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
            KRDHRKL +E DLF   +   G  FW+ KG  I+  L+ ++R++ +   + E+ TP + 
Sbjct: 318 AKRDHRKLGKEHDLFFFHQLSPGSAFWYPKGAHIYNKLVDFIRKQYRRRGFTEVITPNMY 377

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ LW+ SGHW  Y  +MF ++   +       F LKPMNCPGH  +F H   +Y ELP 
Sbjct: 378 NKKLWETSGHWQHYSEDMFKIEVEKEE------FGLKPMNCPGHCLMFGHMPHTYNELPF 431

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY-KDFG 419
           R A+FG ++RNE SG+L GL RVR F QDDAH+FC ++Q+  E  +  + +   Y K FG
Sbjct: 432 RFADFGVLHRNEMSGALTGLTRVRRFQQDDAHIFCRQDQISEEIKQCLDFLEYAYEKVFG 491

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F    + LSTRPE  +G+   WD AE  +   L+   +  +  +N G    +GAFYGPK 
Sbjct: 492 F-TFKLNLSTRPEGFLGNIETWDKAEADLTNALNA--SGRKWVLNPG----DGAFYGPKI 544

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +  ++DA+ R++QC TIQ+DF LP++F+  Y +   EK  PVMIHRAV GS+ER   I+ 
Sbjct: 545 DITIQDALKRNFQCATIQLDFQLPNQFDLSYFDEKGEKQRPVMIHRAVLGSVERMTAILT 604

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIREH 598
           E++ G  P WLSP Q  + T+  S  +YA ++   +      IE +    +T+N ++R+ 
Sbjct: 605 ESYGGKWPFWLSPRQCKIITVHESVRDYANDVKKQIFEAGFEIEYEENCGDTMNKQVRKA 664

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
            + +   I++ G KE    ++ +R   +    +V+L
Sbjct: 665 QLAQFNFILVIGAKEKENGTVNVRTRDNAVRGEVAL 700


>gi|71984192|ref|NP_001022034.1| Threonyl tRNA Synthetase family member (trs-1) [Caenorhabditis
           elegans]
 gi|30145813|emb|CAD89723.1| C. elegans protein C47D12.6b, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 684

 Score =  412 bits (1060), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 227/636 (35%), Positives = 357/636 (56%), Gaps = 23/636 (3%)

Query: 5   IKLTFPDGSIKNFPV-HATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           I++T PDG I        T  ++AE IS+ LA+ AV   +NG V DL  P      +E++
Sbjct: 41  IQITLPDGKIHEGKTWRTTPFEIAERISKGLAEAAVIAKVNGAVWDLDRPFEGNAKLELL 100

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQ 121
             +D  +  V  HS AH++ EA++  +    +  GP I++GFYYD + + +    D+  +
Sbjct: 101 KFDDDEAKQVFWHSSAHVLGEAMER-YCGGHLCYGPPIQEGFYYDMWHENRTICPDDFPK 159

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           I++ ++  +     F +  ++ E   E+F  K   +KV I+         T+YR G   D
Sbjct: 160 IDQIVKAAVKDKQKFERLEMTKEDLLEMF--KYNEFKVRIITEKIHTPKTTVYRCGPLID 217

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHVR TG+VK    + K + +YW G ++   L R+YG ++   ++L ++    EE+
Sbjct: 218 LCRGPHVRHTGKVKAM-AITKNSSSYWEGKADAESLQRLYGISFPDSKQLKEWQKLQEEA 276

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
            KRDHRKL +E DLF   +   G  FW+ KG  I+  L+ ++R++ +   + E+ TP + 
Sbjct: 277 AKRDHRKLGKEHDLFFFHQLSPGSAFWYPKGAHIYNKLVDFIRKQYRRRGFTEVITPNMY 336

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ LW+ SGHW  Y  +MF ++   +       F LKPMNCPGH  +F H   +Y ELP 
Sbjct: 337 NKKLWETSGHWQHYSEDMFKIEVEKEE------FGLKPMNCPGHCLMFGHMPHTYNELPF 390

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY-KDFG 419
           R A+FG ++RNE SG+L GL RVR F QDDAH+FC ++Q+  E  +  + +   Y K FG
Sbjct: 391 RFADFGVLHRNEMSGALTGLTRVRRFQQDDAHIFCRQDQISEEIKQCLDFLEYAYEKVFG 450

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F    + LSTRPE  +G+   WD AE  +   L+   +  +  +N G    +GAFYGPK 
Sbjct: 451 F-TFKLNLSTRPEGFLGNIETWDKAEADLTNALNA--SGRKWVLNPG----DGAFYGPKI 503

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +  ++DA+ R++QC TIQ+DF LP++F+  Y +   EK  PVMIHRAV GS+ER   I+ 
Sbjct: 504 DITIQDALKRNFQCATIQLDFQLPNQFDLSYFDEKGEKQRPVMIHRAVLGSVERMTAILT 563

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIREH 598
           E++ G  P WLSP Q  + T+  S  +YA ++   +      IE +    +T+N ++R+ 
Sbjct: 564 ESYGGKWPFWLSPRQCKIITVHESVRDYANDVKKQIFEAGFEIEYEENCGDTMNKQVRKA 623

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
            + +   I++ G KE    ++ +R   +    +V+L
Sbjct: 624 QLAQFNFILVIGAKEKENGTVNVRTRDNAVRGEVAL 659


>gi|213403436|ref|XP_002172490.1| threonyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
 gi|212000537|gb|EEB06197.1| threonyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
          Length = 699

 Score =  412 bits (1059), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 237/636 (37%), Positives = 359/636 (56%), Gaps = 35/636 (5%)

Query: 5   IKLTFPDGSIKNFPV-HATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEII 62
           I +T PDGS +       T  D+A SIS+ LA + V   +N ++ DL+ P+ +  +++++
Sbjct: 45  ITVTLPDGSTREATSWETTPMDIAVSISKGLADRTVISKVNDQLWDLTRPLEDSCTLKLL 104

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF--DKEQPFSSDELA 120
              DP    V  HS AHI+ EA + +     + IGP   DGF+Y+   D  +  ++++  
Sbjct: 105 DFNDPEGKRVFWHSSAHILGEASE-LHFGCHLCIGPPTTDGFFYEMAIDDNKTVTTEDYP 163

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES-IPAKENVTLYRQGEW 179
            +E   +  I +  PF +  +S E   ++F+  K  YK  I+ES IP   + T+YR G  
Sbjct: 164 ALEALAKNAIKQKQPFERLIVSKENLLKMFKHNK--YKQHIIESKIPDGTSTTVYRCGPL 221

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLC GPHV  TG+VK F  +MK + +Y+ GD+    L RIYG ++   +++++Y  FL 
Sbjct: 222 IDLCVGPHVPHTGRVKAF-AVMKNSSSYFLGDAKNDSLQRIYGVSFPDNKQMSEYKKFLA 280

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+ KRDHRK+ RE DLF   E   G  F+   G +I+  LI+++R + K   ++E+ TP 
Sbjct: 281 EAAKRDHRKIGREQDLFFFHELSPGSCFFLPHGARIYNQLIAWIREQYKIRGFQEVITPN 340

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           + +  LW+ SGHW++Y  NMF+ +   D       FALKPMNCPGH  ++    +SYR+L
Sbjct: 341 MYNVDLWKTSGHWNNYAENMFSFEIEKDK------FALKPMNCPGHCLIYKSRDRSYRDL 394

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P R A+FG ++RNE SG+L GL RVR F QDDAH+FC  +Q+ +E     + +  +Y  F
Sbjct: 395 PWRCADFGVLHRNEFSGALTGLTRVRRFQQDDAHIFCRPDQVRSEIENCFDFLKYVYGVF 454

Query: 419 GFEKIMVKLSTRP-EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           GF    ++LSTRP EK +G    W+ AE  +K  LD   +  +  +N     G+GAFYGP
Sbjct: 455 GF-TFHLELSTRPEEKYLGDLETWNKAEAQLKAALDA--SGYEWELNE----GDGAFYGP 507

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFN-AFYVNSHSEKC----------HPVMIHRA 526
           K +  + DA+ R  QC TIQ+DF LP RF   F+  +  ++            PVMIHRA
Sbjct: 508 KIDITVFDALKRQHQCATIQLDFQLPERFELEFHGTTEGDEAADSTNKNKYIRPVMIHRA 567

Query: 527 VFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF 586
           + GS+ER I I+ E++ G  P WLSP Q  V  ++++A +YA ++   L    L  + D 
Sbjct: 568 ILGSVERMIAILTEHYGGKWPFWLSPRQVSVVPVSAAAFDYANKVQKRLFDAGLFADVDT 627

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
            + T+  KIR   + +   I + G +E    S+ IR
Sbjct: 628 SDNTLPKKIRNAQLSQYNFIFVVGAEEEKTNSVNIR 663


>gi|327288851|ref|XP_003229138.1| PREDICTED: threonyl-tRNA synthetase, cytoplasmic-like [Anolis
           carolinensis]
          Length = 706

 Score =  412 bits (1059), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 232/625 (37%), Positives = 342/625 (54%), Gaps = 50/625 (8%)

Query: 5   IKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEII 62
           I+++ PDG +++      T   VA  IS+S AK AVA  +NG + DL  P+ E  S+E +
Sbjct: 87  IRISLPDGETLEGEARRTTPYQVALRISQSRAKGAVAARVNGTLHDLDRPLEEDASLEFV 146

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF--DKEQPFSSDELA 120
             +     A+  HS AHI+  A +  +  + +  GP  E GF+YD   D E+  S  +L 
Sbjct: 147 DFDARDGQALFWHSSAHILGGAAERFYGAL-LCHGPSTEHGFFYDMYMDGERTVSGKDLP 205

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            +++  Q+II    PF +  +S E   +LF+  K  +K+ I+          +YR G   
Sbjct: 206 ALQEICQDIIEEQCPFERLEVSREDLMQLFKHNK--FKLRIISEKVRTPTAIVYRCGTSI 263

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHVR TG+++   KL+K A AYW+GD ++  L RIYG ++ +  +LT++    EE
Sbjct: 264 DLCRGPHVRHTGEIRAL-KLLKNASAYWKGDPSQETLQRIYGISFPSSAQLTEWERTQEE 322

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQV 299
           + +RDHR++ +E +LF   E   G  F+  KG  I+ TL+ +++ + +K  + E+ TP +
Sbjct: 323 AARRDHRRIGKEQELFFFHELSPGSCFFLPKGAHIYTTLVDFIKSEYLKRGFSEVITPNI 382

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +  LW+ SGHW  Y  NMF+ +   +T      FALKPMNCPGH  +F H  +S+RELP
Sbjct: 383 FNSKLWETSGHWQHYEENMFSFRLEGET------FALKPMNCPGHCLMFGHRPRSWRELP 436

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +RLA+FG ++RNEPSG+L GL RVR F QDDAH+FC  +Q+  E     + + ++Y  FG
Sbjct: 437 LRLADFGVLHRNEPSGALSGLTRVRRFQQDDAHIFCAMDQLEGEIRSCLDFLQAVYSVFG 496

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F  +   LSTRPEK +G   LWD AE +                                
Sbjct: 497 F-TLRFYLSTRPEKFLGEIHLWDQAELV-------------------------------- 523

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC-HPVMIHRAVFGSIERFIGIM 538
           +  +KDA+GR  QC TIQ+DF +P RF+  Y +        PVMIHRAV GS+ER + ++
Sbjct: 524 DIQIKDALGRFHQCATIQLDFQMPIRFDLSYTSKEGATPERPVMIHRAVLGSVERMMAVL 583

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIRE 597
            EN+ G  P WLSP Q +V  +   A  YA EI         + + D     T+N KIR 
Sbjct: 584 AENYGGKWPFWLSPSQIMVIPVGPDAESYAHEIHQTFHQAGFTTDVDLDPGTTLNRKIRN 643

Query: 598 HSIKKIPIIIICGDKEASERSIGIR 622
             + +     + G KE S R++ +R
Sbjct: 644 AQLAQYNFQFVVGRKEMSNRTLNVR 668


>gi|58263294|ref|XP_569057.1| threonine-tRNA ligase [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|134108684|ref|XP_776995.1| hypothetical protein CNBB5220 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50259678|gb|EAL22348.1| hypothetical protein CNBB5220 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57223707|gb|AAW41750.1| threonine-tRNA ligase, putative [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 772

 Score =  412 bits (1059), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 234/636 (36%), Positives = 354/636 (55%), Gaps = 33/636 (5%)

Query: 5   IKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGK-VCDLSDPVREG-SIEI 61
           I +TFPDG +++      T   +A+ IS SLA + +   +N + + DL+ P+    S+ +
Sbjct: 116 ITITFPDGKTVQATSWETTPLQLAKDISPSLADRVIIAKVNNQQLWDLTRPLEASCSLAL 175

Query: 62  ITPEDP----RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFD--KEQPF 114
           +  + P     +  V  HS AH++ EA +  +    +  GP +E+G F+YD      +  
Sbjct: 176 LDFDSPDNNYEARQVFWHSSAHVLGEACERRYEGCCLGYGPPLEEGGFFYDMSLANGRTI 235

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVE-ILESIPAKENVTL 173
           S D+   IE   +  +    PF +  L  E   E+F+  K  YK   I + +P   + T+
Sbjct: 236 SQDDYKPIEDVCKAAVKEKQPFERLELPKEVLLEMFKYNK--YKQHYIQDKVPDGTSSTV 293

Query: 174 YRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQ 233
           YR G   DLC GPHV  TG++K    + K + +Y+ GD+      R+YG ++    ++ +
Sbjct: 294 YRCGPLIDLCLGPHVPHTGRIKSL-AVTKNSSSYFLGDAKNDTFQRVYGMSFPDNAQMKE 352

Query: 234 YLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYE 292
           Y  +LEE+ KRDHRK+ ++ +LF   +   G  F+   G +I+ TL+S+++ +  K  + 
Sbjct: 353 YKKYLEEAAKRDHRKIGKDQELFIFNDLSPGSAFFLPMGMRIYNTLMSFIKDEYFKRGFS 412

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+ +P + + +LW+ SGHW +Y  +MF +K       D    ALKPMNCPGH  +F+   
Sbjct: 413 EVGSPNIFNANLWKTSGHWQNYAEDMFQLKA------DEEQLALKPMNCPGHCLIFDARE 466

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
           +SY+ELP+R AEFG ++RNE SG+L GL RVR F QDDAH+FCT +Q+  E       + 
Sbjct: 467 RSYKELPLRFAEFGVLHRNEASGALSGLTRVRRFVQDDAHIFCTPDQVEAELYSAFEFLD 526

Query: 413 SIYKDFGFEKIMVKLSTR-PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
           ++YK FGF    V LSTR P+K +G   LW+ AE  ++ VL+          N  V   +
Sbjct: 527 AVYKPFGF-TYKVGLSTRNPKKWMGDLELWNKAEGTLREVLEQKVPG-----NWHVNEED 580

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH-----SEKCHPVMIHRA 526
            AFYGPK ++ L DA+ R WQCGTIQ+DFNLP RFN  Y +       ++   PVMIHRA
Sbjct: 581 AAFYGPKLDFQLTDALKRSWQCGTIQLDFNLPERFNLKYHSPEQNPDGTQFARPVMIHRA 640

Query: 527 VFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF 586
           + GS+ERFI I+ E+  G  PLWLSP Q +V  +     EYAQ++A   +   L  E D 
Sbjct: 641 ILGSLERFIAIITESTGGKWPLWLSPRQVVVIPVAKPFTEYAQKVAKTFQEAGLYAEVDL 700

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
            + T+N KIR     +   I++ G  E   +++ IR
Sbjct: 701 TDNTLNKKIRNAQTAQWNFIMVVGQDELDAQAVNIR 736


>gi|325685802|gb|EGD27875.1| threonine--tRNA ligase [Lactobacillus delbrueckii subsp. lactis DSM
           20072]
          Length = 643

 Score =  412 bits (1059), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 227/648 (35%), Positives = 368/648 (56%), Gaps = 27/648 (4%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           LT PDGS K F V  + +D+A SIS SLAK AVA  ++G++  L   +  +  + I+T +
Sbjct: 5   LTLPDGSKKEFDVAVSVADLASSISTSLAKNAVAGKVDGEIKPLDFQLDADYEVAILTNK 64

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L+V+R + A ++   V+  +PE+++    + EDGF+ + DKE      EL  +EK 
Sbjct: 65  DAEGLSVLRATVAFVLEALVKDKYPEIKLGQAEVSEDGFFIETDKEDQIKVTELPDLEKA 124

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN--VTLYRQGEWFDLC 183
           +Q+ I          ++  +  E F  K + YK E+L    AKE   V  Y+ G++ D  
Sbjct: 125 LQKAIKNGEAIEHVQVAKSELAEAF--KDDPYKSELL----AKEGDVVDAYKLGDFVDFG 178

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
               + +TG++KKF KL+ VAGAYW+G S+ P+L RI+GTA+  + +L   L    E ++
Sbjct: 179 FSALLPNTGKIKKF-KLLSVAGAYWKGKSSNPILQRIFGTAFFKEADLEADLKRRAEIKE 237

Query: 244 RDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLD 301
           RDHR + R++DLF +  + G+G+ +W  KG  I + +  Y+  +++   Y+ + TP +++
Sbjct: 238 RDHRTIGRDLDLFFVDPKVGAGLPYWMPKGATIRRIIERYIVDKEVAAGYQHVYTPVLMN 297

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
              ++ SGHW  YR +MF        + +     L+PMNCP H+ ++ H ++SYRELP+R
Sbjct: 298 LDAYKTSGHWAHYREDMFPPMG----MGEGEMLELRPMNCPSHIQIYKHHIRSYRELPIR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AE G ++R E SG+L GL RVR  T +D H F   +Q+  E  +   +I+ +Y DF   
Sbjct: 354 IAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQVQEEFARTLQIIMDVYHDFDIN 413

Query: 422 KIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
               +LS R     +K   +D +W+ +++++K  +D +     D +      GE AFYGP
Sbjct: 414 DYYFRLSYRDPKNTDKYFANDEMWERSQSMLKAAMDDM---GLDYVEAE---GEAAFYGP 467

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +   K A+G D    TIQ+DF LP RF   Y+ +  E+  PVMIHR + G++ERFI  
Sbjct: 468 KLDIQTKTALGNDETMSTIQLDFMLPERFELSYIGADGEEHRPVMIHRGIVGTMERFIAY 527

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           + E +KG  P WL+P+QA +  +   A  +YA+++ + L +     E DFRNE + YKIR
Sbjct: 528 LTEIYKGAFPTWLAPVQAEIIPVNLDAHSDYAKKVRDELVAKGFRAEIDFRNEKLGYKIR 587

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           E   +K+P  ++ GD E +  ++ +R +G+      SL + +  L+K+
Sbjct: 588 ESQTQKVPYTLVLGDDEMNAGTVNVRPYGTEEQNSESLAEFMDKLSKD 635


>gi|316965047|gb|EFV49888.1| threonyl-tRNA synthetase, cytoplasmic [Trichinella spiralis]
          Length = 714

 Score =  412 bits (1059), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 226/623 (36%), Positives = 352/623 (56%), Gaps = 24/623 (3%)

Query: 5   IKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEII 62
           I +T PDG  ++      +  D+   ++  +  + +   ++G + DL  P+ +  +++ +
Sbjct: 58  ITVTLPDGKEVEAMAWRTSPLDIMTKLN--MGGRPIVSKVDGVLWDLERPLEKSCNLQFL 115

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQ 121
             +D     V  HS AH++ EA + ++    +  GP IE+GFYYD F  ++  +++++ +
Sbjct: 116 LFDDDEGKQVFWHSTAHVLGEAAERLFG-CCLCYGPPIENGFYYDMFMDDRTVTAEDMDK 174

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +EK M+  I    PF +  L  E+  E+F  K   +K+ ILE+       T YR G   D
Sbjct: 175 LEKIMKAAIDGKQPFERLELKKEELMEMF--KYNPFKLRILENKVKTPTTTAYRCGPLID 232

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHVR TG +  F K+ K +  +W GDS+   L R+YG ++   ++L  +    EE+
Sbjct: 233 LCRGPHVRHTGLLNSF-KITKNSSTFWEGDSSMESLQRVYGVSFPNSKQLKLWEKMREEA 291

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVL 300
             RDHRKL R+ +LF   E   G  F+  +G  I+ TL+ ++R++  K  + E+ TP + 
Sbjct: 292 ASRDHRKLGRQQELFIFHELSPGSAFFFPRGAYIYNTLVEFLRKQYRKRGFREVITPNIY 351

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  LW+ SGHW  Y  NMF ++   +       F LKPMNCPGH  +F  GL++Y+ELP+
Sbjct: 352 NSRLWETSGHWQHYAKNMFKIEIEKEL------FGLKPMNCPGHCLMFATGLRTYKELPL 405

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R A+FG ++RNE SG+L GL RVR F QDDAH+FC ++Q+ +E     + +  +Y+  GF
Sbjct: 406 RFADFGVLHRNELSGALSGLTRVRRFQQDDAHIFCRQDQIASEIEGCLDFLRFVYETLGF 465

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
             + + LSTRP+  +G    WD+AE  ++  L+  K      +   +  G+GAFYGPK +
Sbjct: 466 -SMKLYLSTRPDDFMGDVKTWDEAEAQLQCALEKFK------LPWTLNAGDGAFYGPKID 518

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
            I+ DA+ R  QC TIQ+DF LP RF+  YV+ +  K  PV+IHRAV GSIER I ++ E
Sbjct: 519 IIVLDAMQRQHQCATIQLDFQLPVRFDLHYVDENHVKQRPVIIHRAVLGSIERMIAVLTE 578

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF-RNETINYKIREHS 599
           NF G  P WLSP QA+V  +     +YA ++   +       + D   ++T+  KIR   
Sbjct: 579 NFAGKWPFWLSPRQAMVIPVHPEFDDYALQVQQKIFDAGFECDVDVDASDTMKKKIRNAQ 638

Query: 600 IKKIPIIIICGDKEASERSIGIR 622
           + K   I++ G KE    S+ IR
Sbjct: 639 LGKWNFILVVGAKEKENSSVNIR 661


>gi|300812909|ref|ZP_07093302.1| threonine--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
 gi|300496107|gb|EFK31236.1| threonine--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
          Length = 643

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 226/648 (34%), Positives = 367/648 (56%), Gaps = 27/648 (4%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           LT PDGS K F    + +D+A SIS SLAK A+A  ++G++  L   +  +  + I+T +
Sbjct: 5   LTLPDGSKKEFDAAVSVADLASSISTSLAKNALAGKVDGEIKPLDFQLDADHEVAILTNK 64

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L+V+R + A ++   V+  +PE+++    + EDGF+ + DKE      EL  +EK 
Sbjct: 65  DAEGLSVLRATVAFVLEALVKDKYPEIKLGQAEVSEDGFFIETDKEDQIKVTELPDLEKA 124

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN--VTLYRQGEWFDLC 183
           +Q+ I          ++  +  E F  K + YK E+L    AKE   V  Y+ G++ D  
Sbjct: 125 LQKAIKNGEAIEHVQVAKSELAEAF--KDDPYKSELL----AKEGDVVNAYKLGDFVDFG 178

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
               + +TG++KKF KL+ VAGAYW+G S+ PML RI+GTA+  + +L   L    E ++
Sbjct: 179 FSALLPNTGKIKKF-KLLSVAGAYWKGKSSNPMLQRIFGTAFFKEADLEADLKRRAEIKE 237

Query: 244 RDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLD 301
           RDHR + R++DLF +  + G+G+ +W  KG  I + +  Y+  +++   Y+ + TP +++
Sbjct: 238 RDHRTIGRDLDLFFVDPKVGAGLPYWMPKGATIRRIIERYIVDKEVAAGYQHVYTPVLMN 297

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
              ++ SGHW  YR +MF        + +     L+PMNCP H+ ++ H ++SYRELP+R
Sbjct: 298 LDAYKTSGHWAHYREDMFPPM----DMGEGEMLELRPMNCPSHIQIYKHHIRSYRELPIR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AE G ++R E SG+L GL RVR  T +D H F   +Q+  E  +   +I+ +Y DF   
Sbjct: 354 IAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQVQEEFARTLQIIMDVYHDFDIN 413

Query: 422 KIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
               +LS R     +K   +D +W+ +++++K  +D +     D +      GE AFYGP
Sbjct: 414 DYYFRLSYRDPKNTDKYFANDEMWERSQSMLKAAMDDM---GLDYVEAE---GEAAFYGP 467

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +   K A+G D    TIQ+DF LP RF   Y+ +  E+  PVMIHR + G++ERFI  
Sbjct: 468 KLDIQTKTALGNDETMSTIQLDFMLPERFELSYIGADGEEHRPVMIHRGIVGTMERFIAY 527

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           + E +KG  P WL+P+QA +  +   A  +YA+++ + L +     E DFRNE + YKIR
Sbjct: 528 LTEIYKGAFPTWLAPVQAEIIPVNLDAHSDYAKKVRDELVAKGFRAEIDFRNEKLGYKIR 587

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           E   +K+P  ++ GD E +  ++ +R +G+      SL + +  L+K+
Sbjct: 588 ESQTQKVPYTLVLGDDEMNAGTVNVRPYGTEEQNSESLAEFMDKLSKD 635


>gi|331082613|ref|ZP_08331736.1| threonyl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA]
 gi|330400232|gb|EGG79874.1| threonyl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA]
          Length = 658

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 246/653 (37%), Positives = 367/653 (56%), Gaps = 27/653 (4%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPE 65
           +T  DGS K +    +  ++A  IS  LA+ A A  +NG+V DL   V E   + I+T  
Sbjct: 3   ITLKDGSKKEYAESKSVYEIALDISEGLARAACAGEVNGEVVDLRTQVSEDCELNILTAN 62

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D + LA +RH+ +H++AEAV++++PE ++AIGP I+ GFYYDFD E  FS +EL  +EK+
Sbjct: 63  DEKGLAALRHTASHVLAEAVKNLYPEAKLAIGPSIDTGFYYDFDHES-FSREELDALEKE 121

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M++II + +   +  +  E+A +  E K E YKVE+++ +P  E ++ Y QG++ DLC G
Sbjct: 122 MKKIIKKGAKIQRYTMPREEAIKFMEEKGEDYKVELIKDLPEGEEISFYSQGDFVDLCAG 181

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PH+ ST  VK F KL+  +GAYWRGD    MLSRIYGTA++ + EL +YL  LEE++KRD
Sbjct: 182 PHLMSTKGVKAF-KLISSSGAYWRGDEKNKMLSRIYGTAFSKKDELNEYLEQLEEAKKRD 240

Query: 246 HRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKDD---YEEINTPQVLD 301
           H KL REM LF   +  G G+     KG  + + L  ++   ++D+   Y    TP +  
Sbjct: 241 HNKLGREMGLFTTVDVIGQGLPLLMPKGVIMLKELQRWIE-DLEDNEWGYVRTKTPLMAK 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             L++ SGHWD Y+  MF +    D  KD   FAL+PM CP    V+     SYRELP+R
Sbjct: 300 NDLYKISGHWDHYKEGMFVL---GDEEKDKEVFALRPMTCPFQYYVYKANQHSYRELPIR 356

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF- 420
             E  +++RNE SG +HGL RVR FT  + H+    +QM  E      L     +  G  
Sbjct: 357 YGETSTLFRNEDSGEMHGLTRVRQFTISEGHLIVRPDQMVEEFKGCLALAKHCLETLGVA 416

Query: 421 EKIMVKLST----RPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           E +   LS       EK +G   +W++ E  ++ +L  +     + +      GE AFYG
Sbjct: 417 EDVTYHLSKWDPENKEKYIGEPEVWEETEGHIRNILTELGVPFVEDV------GEAAFYG 470

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK +   K+  G++    TIQ D  L  +F+ +Y++ + +K  P +IHR   G  ER + 
Sbjct: 471 PKVDINAKNVYGKEDTMITIQWDALLAEQFDMYYIDENGDKKRPYIIHRTSMGCYERTLA 530

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
            +IE + G  P WL P Q  V  I+    +YA E+   LK++ +    D R+E I YKIR
Sbjct: 531 WLIEKYAGLFPTWLCPEQVRVLPISEKYGDYANEVQKQLKANGIRSSVDNRSEKIGYKIR 590

Query: 597 EHSIKKIPIIIICGDKEASERSIGIR-RFGSTTTQKV--SLLDAI--PILTKE 644
           E  ++K+P +++ G KE  ++ + +R R+     QK     +DAI   I TKE
Sbjct: 591 EARLEKVPYMLVVGAKEEEDKVVSVRSRYLGDEGQKTLSEFIDAICKEIRTKE 643


>gi|75764566|ref|ZP_00744025.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|74487945|gb|EAO51702.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
          Length = 445

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 196/441 (44%), Positives = 304/441 (68%), Gaps = 15/441 (3%)

Query: 196 KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDL 255
           K F+L  V+GAYWRGDSN  +L RIYG A+++Q+EL +YL+F+EE+ KR+HRKL  E++L
Sbjct: 2   KAFQLTHVSGAYWRGDSNNQVLQRIYGVAFSSQKELEEYLHFVEEAAKRNHRKLGSELEL 61

Query: 256 FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSY 314
           F  +E+  G+ F+  KG  I   L +++R   K+ +Y+E+ TP +++Q +W++SGHW  Y
Sbjct: 62  FMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQEVWERSGHWGHY 121

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
           + NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R+ EFG V+R+E S
Sbjct: 122 KDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIRMCEFGQVHRHEFS 175

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
           G+L+GL+RVR F QDDAH+F T +Q+ +E   +   I  +YK FGFE   V+LSTRPE  
Sbjct: 176 GALNGLLRVRTFCQDDAHLFVTPKQIEDEIKSVMAQIDYVYKTFGFE-YEVELSTRPEDS 234

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           +G D LW+ AE  ++ VL ++  + + R+N G    +GAFYGPK ++ +KDA+ R  QCG
Sbjct: 235 MGDDKLWEQAEAALENVLQSL--NYKYRLNEG----DGAFYGPKIDFHIKDALNRSHQCG 288

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQ 554
           TIQ+DF +P +F+  Y++ +++K  PV+IHRAV GS++RF+ I+IE+F G  P W++P+Q
Sbjct: 289 TIQLDFQMPEKFDLNYIDENNDKKRPVVIHRAVLGSLDRFLAILIEHFGGAFPAWVAPVQ 348

Query: 555 AIVTTITSSAVE-YAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
             V  ++++  E Y  E+A+ L    + +E D R+E + YKIRE  ++K+P  ++ GDKE
Sbjct: 349 VKVVPVSNAVHEQYCSEVAHKLAQAGVRVEQDARDEKLGYKIREAQMQKVPYFLVIGDKE 408

Query: 614 ASERSIGIRRFGSTTTQKVSL 634
               ++ +R++G   ++ V+L
Sbjct: 409 MESGAVNVRKYGEEKSEVVAL 429


>gi|42519522|ref|NP_965452.1| threonyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
 gi|73919800|sp|Q74IC0|SYT_LACJO RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|41583811|gb|AAS09418.1| threonyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
          Length = 643

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 228/640 (35%), Positives = 355/640 (55%), Gaps = 23/640 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPE 65
           +T PDGS K+F    +  ++A SI+ SL K AV   ING +  L   V E     IIT +
Sbjct: 5   VTLPDGSKKDFDKAVSVKELASSIATSLGKAAVGAKINGVMKPLDYIVDEDVEAAIITDK 64

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L ++R + A ++    +  +PE+++ +    E GF+ D DKE      EL  +EK 
Sbjct: 65  DEEGLDILRATAAFLLEAVAKRKYPELRLGMHEADEGGFFVDTDKEDQIKVTELPDLEKA 124

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           MQ+ I          +   +  E+F  K + +K+++L+    ++ V +Y+ G++ D    
Sbjct: 125 MQKAIKNGEKIEYTSMKKSELEEIF--KDDQFKLDLLKD--EEDEVAVYKLGDFVDFGFD 180

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
             + +TG++K F KL+ VAGAYW G S+ PML RI+GTA+  +  L + L    E ++RD
Sbjct: 181 ALLPNTGKIKNF-KLLSVAGAYWLGKSSNPMLQRIFGTAFFKKAALDEDLKRRAEIKERD 239

Query: 246 HRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQH 303
           HR + R++DLF +  + G+G+ +W  KG  I + +  Y+  +++ D YE + TP +++  
Sbjct: 240 HRTIGRDLDLFFVDPKVGAGLPYWMPKGATIRRVVERYIVDKEVADGYEHVYTPVLMNVD 299

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
            ++ SGHW  YR +MF        + D     L+PMNCP H+ ++ H ++SYRELP+R+A
Sbjct: 300 AYKTSGHWAHYRDDMFPPM----DMGDGEMLELRPMNCPSHIQIYKHHIRSYRELPIRIA 355

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           E G ++R E SG+L GL RVR  T +D H F   +Q+  E  K+  LI+ +YKDF     
Sbjct: 356 ELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQIREEFAKVLKLIMDVYKDFDITDY 415

Query: 424 MVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
             +LS R     +K   +D +W+ +++++K  +D +     D +      GE AFYGPK 
Sbjct: 416 YFRLSYRDPKNTDKYYANDEMWETSQSMLKAAMDDL---GLDYVEAE---GEAAFYGPKL 469

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +   K A+G D    TIQ+DF LP RF   YV    E+  PVMIHR + G++ERFI  + 
Sbjct: 470 DIQTKTALGNDETMSTIQLDFMLPERFGLTYVGQDGEEHRPVMIHRGIVGTMERFIAYLT 529

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           E +KG  P WL+P+QA +  +   A  EYA ++   L       E D RNE + YKIRE 
Sbjct: 530 EIYKGAFPTWLAPVQAEIIPVNEEAHGEYADKVRAELAKRGFRAEVDHRNEKLGYKIRES 589

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
             +K+P  ++ GD+E +   + +RR+G+      SL D I
Sbjct: 590 QTQKVPYTLVLGDEEMNANGVNVRRYGTEEQISKSLDDFI 629


>gi|224539835|ref|ZP_03680374.1| hypothetical protein BACCELL_04745 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224518545|gb|EEF87650.1| hypothetical protein BACCELL_04745 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 519

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 210/522 (40%), Positives = 319/522 (61%), Gaps = 17/522 (3%)

Query: 129 IIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           ++A+    +++ +S   A + F  + E YK E++  +     +T Y QG + DLCRGPH+
Sbjct: 1   LVAKKEAVVRESISKTDALKKFGDRGENYKCELISEL-EDGRITTYTQGAFTDLCRGPHL 59

Query: 189 RSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRK 248
            +T  +K   KLM VAGAYWRG  +R M++RIYG  +  ++ L +YL  LEE++KRDHRK
Sbjct: 60  MTTAPIKAI-KLMSVAGAYWRGHEDRKMMTRIYGITFPKKKMLDEYLAMLEEAKKRDHRK 118

Query: 249 LAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQ 306
           + +EMDLF  ++  G G+  W  KG  +   L  ++RR + + DY+E+ TP + ++ L+ 
Sbjct: 119 IGKEMDLFMFSDTVGKGLPMWLPKGTALRLRLQEFLRRIQARYDYQEVITPPIGNKLLYI 178

Query: 307 QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFG 366
            SGH+  Y  + F       T ++   + LKPMNCP H  ++ +  +SY++LP+RLAEFG
Sbjct: 179 TSGHYAKYGKDSFQ---PIHTPEEGEEYFLKPMNCPHHCMIYKNSPRSYKDLPLRLAEFG 235

Query: 367 SVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK 426
           +V R E SG LHGL RVR FTQDDAH+FC  +Q+ +E L++ ++I  +++   F  +  +
Sbjct: 236 TVCRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKDEFLRVMDIISIVFRSMDFANVEAQ 295

Query: 427 LSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           +S R     EK +GSD  W+ AE         I+   +  ++  +  GE AFYGPK +++
Sbjct: 296 ISLRDKVNREKYIGSDENWERAEQ------SIIEACEEKGLSARIEYGEAAFYGPKLDFM 349

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDAIGR WQ GTIQVD+NLP RF   Y  + ++K  PVMIHRA FGS+ERF+ ++IE+ 
Sbjct: 350 VKDAIGRRWQLGTIQVDYNLPERFELEYTGADNQKHRPVMIHRAPFGSMERFVAVLIEHT 409

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  PLWL+P Q  +  I+    +YAQE+   LK + +    D RNE I  KIR++ +K+
Sbjct: 410 AGKFPLWLTPEQVAILPISEKFNDYAQEVKKFLKQYDIRAIVDERNEKIGRKIRDNELKR 469

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IP ++I G+KEA  R + +R+ G      +   +   IL +E
Sbjct: 470 IPYMLIVGEKEAENREVSVRKQGEGDKGTMKFEEFAKILNEE 511


>gi|315038857|ref|YP_004032425.1| threonyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
 gi|312276990|gb|ADQ59630.1| threonyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
          Length = 645

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 229/640 (35%), Positives = 355/640 (55%), Gaps = 22/640 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS K F    +  DVA SI+ SL K AV   +NG+V  L   +  +  I I+T +
Sbjct: 5   VTLPDGSKKEFDKAVSVKDVASSIATSLGKAAVGAKVNGQVKPLDYEIDSDVEIAILTDK 64

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L ++R + A  +    +  +PE+++      E GFY D DK+      EL ++EK 
Sbjct: 65  DEEGLDILRATAAFALEAVAKKKYPELRIGEHVADEGGFYVDTDKKDQIKVTELPELEKA 124

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M++++          +   +  +++  K + YK E+L+ +   + V  Y+ G++ D    
Sbjct: 125 MEKLVKSGQAIEHVEMDKSELEDIY--KDDPYKSELLKKVEG-DKVDAYKLGDFVDFGFD 181

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
             + +TG++K F KL+ VAGAYW G S+ PML RI+GTA+  +  L   L    E ++ D
Sbjct: 182 ALLPNTGKIKHF-KLLSVAGAYWLGKSSNPMLQRIFGTAFFKEAALKDDLKRRAEIKECD 240

Query: 246 HRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQH 303
           HR + R++DLF +  + G+G+ +W  KG  I + +  Y+  R++ D Y+ + TP +++  
Sbjct: 241 HRTIGRDLDLFFVDPKVGAGLPYWMPKGATIRRVVERYIIDREVADGYQHVYTPVLMNLD 300

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
            ++ SGHW  YR +MF        + D     L+PMNCP H+ ++ H ++SYR+LP+R+A
Sbjct: 301 AYKTSGHWAHYRDDMFPPM----DMGDGEMLELRPMNCPSHIQIYKHHIRSYRDLPLRVA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           E G ++R E SG+L GL RVR  T +D H F   +Q+ +E  KI  LI+ +YKDF     
Sbjct: 357 ELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQVQDEFAKILKLIMDVYKDFDITDY 416

Query: 424 MVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
             +LS R     EK   +D +W+ ++ ++KG +D +     D +      GE AFYGPK 
Sbjct: 417 YFRLSYRDPKNTEKYFANDEMWERSQKMLKGAMDDL---GLDYVEAE---GEAAFYGPKL 470

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +   K A+G D    TIQ+DF LP RF   YV    E+  PVMIHR + G++ERFI  + 
Sbjct: 471 DIQTKTALGNDETMSTIQLDFMLPERFGLTYVGQDGEEHRPVMIHRGIVGTMERFIAYLT 530

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           E +KG  P WL+PIQA +  + + A  EYA+++   L       E D RNE + YKIRE 
Sbjct: 531 EIYKGAFPTWLAPIQAEIIPVNNDAHGEYAEKVRQELAKRGFRAEVDNRNEKMGYKIRES 590

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
             +K+P  ++ GD+E    S+ +RR+G+      SL D I
Sbjct: 591 QTQKVPYTLVLGDEEMKNGSVNVRRYGTDEEISKSLDDFI 630


>gi|300361194|ref|ZP_07057371.1| threonine--tRNA ligase [Lactobacillus gasseri JV-V03]
 gi|300353813|gb|EFJ69684.1| threonine--tRNA ligase [Lactobacillus gasseri JV-V03]
          Length = 643

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 228/641 (35%), Positives = 359/641 (56%), Gaps = 25/641 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIE--IITP 64
           +T PDGS K+F    +  ++A SI+ SL K AV   ING++  L D V +  +E  IIT 
Sbjct: 5   VTLPDGSKKDFDKAVSVKELASSIATSLGKAAVGAKINGEMKPL-DYVVDEDVEAAIITD 63

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           +D   L ++R + A ++    +  +PE+++ +    E GF+ D DKE      EL ++EK
Sbjct: 64  KDEEGLDILRATAAFLLEAIAKRKYPELRLGMHEADEGGFFVDTDKEDQIKITELPELEK 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
           +MQ+ I          +   +  ++F  K + +K+++L+    K+ V +Y+ G++ D   
Sbjct: 124 EMQKAIKNGEKIEYTSMKKSELEDIF--KDDQFKLDLLKD--EKDEVAVYKLGDFVDFGF 179

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
              + +TG++K F KL+ VAGAYW G S+ PML RI+GTA+  +  L + L    E ++R
Sbjct: 180 EALLPNTGKIKNF-KLLSVAGAYWLGKSSNPMLQRIFGTAFFKKAALDEDLKRRAEIKER 238

Query: 245 DHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQ 302
           DHR + R++DLF +  + G+G+ +W  KG  I + +  Y+  +++ D YE + TP +++ 
Sbjct: 239 DHRTIGRDLDLFFVDPKVGAGLPYWMPKGATIRRVVERYIVDKEVADGYEHVYTPVLMNV 298

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             ++ SGHW  YR +MF        + D     L+PMNCP H+ ++ H ++SYRELP+R+
Sbjct: 299 DAYKTSGHWAHYRDDMFPPM----DMGDGEMLELRPMNCPSHIQIYKHHIRSYRELPIRI 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AE G ++R E SG+L GL RVR  T +D H F   +Q+  E  K+  LI+ +YKDF    
Sbjct: 355 AELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQIREEFAKVLKLIMDVYKDFDITD 414

Query: 423 IMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
              +LS R     +K   +D +W+ +++++K  +D +     D +      GE AFYGPK
Sbjct: 415 YYFRLSYRDPKNTDKYYANDEMWEKSQSMLKAAMDDL---GLDYVEAE---GEAAFYGPK 468

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +   K A+G D    TIQ+DF LP RF   YV    E+  PVMIHR + G++ERFI  +
Sbjct: 469 LDIQTKTALGNDETMSTIQLDFMLPERFGLTYVGQDGEEHRPVMIHRGIVGTMERFIAYL 528

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
            E +KG  P WL+P+QA +  +   A   YA ++   L       E D RNE + YKIRE
Sbjct: 529 TEIYKGAFPTWLAPVQAEIIPVNEEAHGAYADKVREELAKRGFRAEVDHRNEKLGYKIRE 588

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
              +K+P  ++ GD E +   + +RR+G+      SL D I
Sbjct: 589 SQTQKVPYTLVLGDDEMNANGVNVRRYGTEEQISKSLDDFI 629


>gi|227892831|ref|ZP_04010636.1| theronyl-tRNA synthetase [Lactobacillus ultunensis DSM 16047]
 gi|227865333|gb|EEJ72754.1| theronyl-tRNA synthetase [Lactobacillus ultunensis DSM 16047]
          Length = 645

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 229/640 (35%), Positives = 350/640 (54%), Gaps = 22/640 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPE 65
           +T PDGS K+F    +  D+A SI+ SL K AV   +NG V  L   +     + I+T +
Sbjct: 5   ITLPDGSKKDFDKAVSVKDLASSIATSLGKAAVGAKVNGAVKPLDYEINSDVEVAILTDK 64

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L ++R + A  +    +  +PE+ +      E GFY D DK+      EL  +EK 
Sbjct: 65  DEEGLDILRATAAFALEAVAKKKYPELHLGEHVADEGGFYVDTDKKDQIKVTELPDLEKA 124

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           MQ++I          ++  +  +++  K + YK  +L  +   + V  Y+ G++ D    
Sbjct: 125 MQKLIKSGQAIEHVEMAKSELADMY--KDDPYKSALLNKVEG-DKVDAYKLGDFVDFGFD 181

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
             + +TG++K F KL+ VAGAYW G S+ PML RI+GTA+  +  L   L    E ++RD
Sbjct: 182 ALLPNTGKIKHF-KLLSVAGAYWLGKSSNPMLQRIFGTAFFKESALKDDLKRRAEIKERD 240

Query: 246 HRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQH 303
           HR + R++DLF +  + G+G+ +W  KG  I + +  Y+  R++ D Y+ + TP +++  
Sbjct: 241 HRTIGRDLDLFFVDPKVGAGLPYWMPKGATIRRVVERYIIDREVADGYDHVYTPVLMNLD 300

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
            ++ SGHW  YR +MF        + D     L+PMNCP H+ +F H ++SYR+LP+R+A
Sbjct: 301 AYKTSGHWAHYRDDMFPPM----DMGDGEMLELRPMNCPSHIQIFKHHIRSYRDLPLRVA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           E G ++R E SG+L GL RVR  T +D H F   +Q+ +E  KI  LI+ +YKDF     
Sbjct: 357 ELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQVQDEFAKILKLIMDVYKDFDITDY 416

Query: 424 MVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
             +LS R     EK   +D +W+ ++ ++KG +D +     D +      GE AFYGPK 
Sbjct: 417 YFRLSYRDPKNTEKYFANDEMWERSQKMLKGAMDDL---GLDYVEAE---GEAAFYGPKL 470

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +   K A+G D    TIQ+DF LP RF   YV    E+  PVMIHR + G++ERFI  + 
Sbjct: 471 DIQTKTALGNDETMSTIQLDFMLPERFGLTYVGQDGEEHRPVMIHRGIVGTMERFIAYLT 530

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           E +KG  P WL+PIQA +  + + A  EYA+++   L       E D RNE + YKIRE 
Sbjct: 531 EIYKGAFPTWLAPIQAEIIPVNNEAHGEYAEKVRQELAKRGFRAEVDDRNEKMGYKIRES 590

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
             +K+P  ++ GD E     + +RR+G+      SL D I
Sbjct: 591 QTQKVPYTLVLGDDEMKSGKVNVRRYGTDEEISKSLDDFI 630


>gi|116630042|ref|YP_815214.1| threonyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323]
 gi|238853770|ref|ZP_04644136.1| threonine--tRNA ligase [Lactobacillus gasseri 202-4]
 gi|282851336|ref|ZP_06260701.1| threonine--tRNA ligase [Lactobacillus gasseri 224-1]
 gi|311110329|ref|ZP_07711726.1| threonine--tRNA ligase [Lactobacillus gasseri MV-22]
 gi|122273021|sp|Q041U6|SYT_LACGA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|116095624|gb|ABJ60776.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Lactobacillus
           gasseri ATCC 33323]
 gi|238833579|gb|EEQ25850.1| threonine--tRNA ligase [Lactobacillus gasseri 202-4]
 gi|282557304|gb|EFB62901.1| threonine--tRNA ligase [Lactobacillus gasseri 224-1]
 gi|311065483|gb|EFQ45823.1| threonine--tRNA ligase [Lactobacillus gasseri MV-22]
          Length = 643

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 228/641 (35%), Positives = 359/641 (56%), Gaps = 25/641 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIE--IITP 64
           +T PDGS K+F    +  ++A SI+ SL K AV   ING++  L D V +  +E  IIT 
Sbjct: 5   VTLPDGSKKDFDKAVSVKELASSIATSLGKAAVGAKINGEMKPL-DYVVDEDVEAAIITD 63

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           +D   L ++R + A ++    +  +PE+++ +    E GF+ D DKE      EL ++EK
Sbjct: 64  KDEEGLNILRATAAFLLEAIAKRKYPELRLGMHEADEGGFFVDTDKEDQIKITELPELEK 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
           +MQ+ I          +   +  ++F  K + +K+++L+    K+ V +Y+ G++ D   
Sbjct: 124 EMQKAIKNGEKIEYTSMKKSELEDIF--KDDQFKLDLLKD--EKDEVAVYKLGDFVDFGF 179

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
              + +TG++K F KL+ VAGAYW G S+ PML RI+GTA+  +  L + L    E ++R
Sbjct: 180 EALLPNTGKIKNF-KLLSVAGAYWLGKSSNPMLQRIFGTAFFKKAALDEDLKRRAEIKER 238

Query: 245 DHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQ 302
           DHR + R++DLF +  + G+G+ +W  KG  I + +  Y+  +++ D YE + TP +++ 
Sbjct: 239 DHRTIGRDLDLFFVDPKVGAGLPYWMPKGATIRRVVERYIVDKEVADGYEHVYTPVLMNV 298

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             ++ SGHW  YR +MF        + D     L+PMNCP H+ ++ H ++SYRELP+R+
Sbjct: 299 DAYKTSGHWAHYRDDMFPPM----DMGDGEMLELRPMNCPSHIQIYKHHIRSYRELPIRI 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AE G ++R E SG+L GL RVR  T +D H F   +Q+  E  K+  LI+ +YKDF    
Sbjct: 355 AELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQIREEFAKVLKLIMDVYKDFDITD 414

Query: 423 IMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
              +LS R     +K   +D +W+ +++++K  +D +     D +      GE AFYGPK
Sbjct: 415 YYFRLSYRDPKNTDKYYANDEMWEKSQSMLKAAMDDL---GLDYVEAE---GEAAFYGPK 468

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +   K A+G D    TIQ+DF LP RF   YV    E+  PVMIHR + G++ERFI  +
Sbjct: 469 LDIQTKTALGNDETMSTIQLDFMLPERFGLTYVGQDGEEHRPVMIHRGIVGTMERFIAYL 528

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
            E +KG  P WL+P+QA +  +   A   YA ++   L       E D RNE + YKIRE
Sbjct: 529 TEIYKGAFPTWLAPVQAEIIPVNEEAHGAYADKVREELAKRGFRAEVDHRNEKLGYKIRE 588

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
              +K+P  ++ GD E +   + +RR+G+      SL D I
Sbjct: 589 SQTQKVPYTLVLGDDEMNANGVNVRRYGTEEQISKSLDDFI 629


>gi|295425303|ref|ZP_06818006.1| threonine--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
 gi|295065079|gb|EFG55984.1| threonine--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
          Length = 659

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 231/640 (36%), Positives = 357/640 (55%), Gaps = 22/640 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS K+F  + + +D+A  I+ SL K AVA  +NG++  L   +  +  + IIT +
Sbjct: 20  ITLPDGSKKDFDENLSIADLAHKIATSLGKAAVAGKVNGQIEPLDYELDSDAEVAIITDK 79

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L V+R + A +     ++ +P++ +      E GFY D DK+      EL ++EK 
Sbjct: 80  DKEGLDVLRATAAFLFEAVAKAKYPKLHLGEHVTDEGGFYVDTDKDDQIKIGELPELEKA 139

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M++ I          +S     +  E K + YK  +L  I   + V  Y+ G++ D    
Sbjct: 140 MEKAIKNGEKIEHVRVSKSDLED--EYKDDPYKSALLAKID-DDVVDAYKLGDFVDFGFD 196

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
             + +TG++K F KL+ VAGAYW G S+ PML RI+GTA+  + +L   L   +E ++RD
Sbjct: 197 ALLPNTGKIKHF-KLLSVAGAYWGGKSSNPMLQRIFGTAFFKEADLKADLKRRQEIKERD 255

Query: 246 HRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQH 303
           HR + R++DLF +  + G+G+ +W  KG  I + +  Y+  R++ D Y+ + TP +++  
Sbjct: 256 HRTIGRDLDLFFVDPKVGAGLPYWMPKGATIRRVVERYIIDREVADGYQHVYTPVLMNLD 315

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
            ++ SGHW  YR +MF        + D     L+PMNCP H+ +F H ++SYR+LP+R+A
Sbjct: 316 AYKTSGHWAHYRDDMFPPM----DMGDGEMLELRPMNCPSHIQIFKHHIRSYRDLPLRVA 371

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           E G ++R E SG+L GL RVR  T +D H F   +Q+ +E  KI  LI+ +YKDF     
Sbjct: 372 ELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQVQDEFAKILKLIMDVYKDFDITDY 431

Query: 424 MVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
             +LS R     +K   +D +W+ ++ ++KG +D +     D +      GE AFYGPK 
Sbjct: 432 YFRLSYRDPKNTQKYFANDEMWERSQKMLKGAMDDL---GLDYVEAE---GEAAFYGPKL 485

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +   K A+G D    TIQ+DF LP RF   YV    E+  PVMIHR + G++ERFI  + 
Sbjct: 486 DIQTKTALGNDETMSTIQLDFMLPDRFGLTYVGKDGEEHRPVMIHRGIVGTMERFIAYLT 545

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           E +KG  P WL+PIQA +  + + A  EYA+++   L       E D RNE + YKIRE 
Sbjct: 546 EIYKGAFPTWLAPIQAEIIPVNNDAHGEYAEKVRQELAKRGFRAEVDNRNEKLGYKIRES 605

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
             +K+P  ++ GD+E    S+ +RR+G+      SL D I
Sbjct: 606 QTQKVPYTLVLGDEEMKSNSVNVRRYGTDEEISKSLDDFI 645


>gi|310796349|gb|EFQ31810.1| threonyl-tRNA synthetase [Glomerella graminicola M1.001]
          Length = 791

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 238/699 (34%), Positives = 371/699 (53%), Gaps = 72/699 (10%)

Query: 5   IKLTFPDGSIKNFPVH-ATGSDVAESISRSLAKKAVAVAIN---GKVCDLSDPVREG-SI 59
           I +T PDGS++    +  T  ++A+SIS SL K+ V   ++    ++ DL  P+ +   +
Sbjct: 81  ITITMPDGSVRQGTSYETTPGEIAKSISNSLYKRTVVARLDSDENQLWDLDRPLEKSCKL 140

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD--FDKEQPFSSD 117
           E++  +D +   V  HS AHI+ EA +  +    + IGP +++GFYY+          + 
Sbjct: 141 ELLNFDDEQGKQVFWHSSAHILGEACERRF-GCSLCIGPPVDNGFYYEMALPGGAAVQAS 199

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQ 176
           +   +E  +  I+     F +  L+ E+  E+F   K  YK  I+ + IP     T+YR 
Sbjct: 200 DWKPLESIVGSIVKEKQKFERLELTKEQLLEMFSYNK--YKQHIINDKIPDGTKTTVYRN 257

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           G   DLCRGPHV ST +++ F  +MK + +Y+ G      L R+YG ++ +++EL  +  
Sbjct: 258 GPLIDLCRGPHVPSTDRIEAF-SIMKNSASYFLGSQENDSLQRVYGVSFPSKKELAAHKK 316

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEIN 295
           +LEE+  RDHRKL ++  LF   E   G   W   G +I+ TL++Y++ +  K DY E+ 
Sbjct: 317 WLEEAAARDHRKLGQDQQLFFFHELSPGSAMWLPHGARIYNTLLAYIKEQYFKRDYHEVI 376

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           +P + +  LW+ SGHWD Y+ +MF +        D   F LKPMNCPGH  +F H  K+Y
Sbjct: 377 SPNMYNAELWKISGHWDHYKDDMFVIDV------DKEKFGLKPMNCPGHCLMFAHTPKAY 430

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
            +LP R+A+FG ++RNE SG+L GL RVR F QDDAH+FC ++Q+ +E   + + +  +Y
Sbjct: 431 HQLPWRVADFGVLHRNEASGALSGLTRVRRFQQDDAHIFCREDQIKSEISNLFDFLREMY 490

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
              GF    ++LSTRPEK +G    W+ AE+++K  LD     ++  +   +  G+GAFY
Sbjct: 491 GLLGF-TFKLRLSTRPEKYLGELETWNRAEDMLKQALDEFA-LTEAGVPWTLNEGDGAFY 548

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH--------------------- 514
           GPK +  + D + R+WQC TIQ+DF LP  F   YV++                      
Sbjct: 549 GPKIDIKIMDVLNREWQCATIQLDFQLPQNFGLEYVSADAPAKSKEEAPAAPKAPEVKVK 608

Query: 515 -------------------------SEKCH-PVMIHRAVFGSIERFIGIMIENFKGNLPL 548
                                    +  C  PV+IHRA+ GSIERF GI+IE+F G  P 
Sbjct: 609 DPQAIIDSAAGVGEEKEKKRTIKPLTNGCQRPVIIHRAMAGSIERFTGILIEHFAGKWPF 668

Query: 549 WLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIII 608
           WLSP Q +V  +    VEYA+E+    K   + ++ D    T+  KIR   + +   I +
Sbjct: 669 WLSPRQIMVIPVGKGFVEYAEEVQATFKKQGMWVDVDLSGNTLPKKIRSAQLSQYNFIFV 728

Query: 609 CGDKEASERSIGIRRFGSTTTQK----VSLLDAIPILTK 643
            GD+E   + + IR    T++Q     V +++A+  L K
Sbjct: 729 VGDEEMKHKQVNIRYRDDTSSQDRGKPVDVIEAVERLKK 767


>gi|82753545|ref|XP_727721.1| threonyl-tRNA synthetase [Plasmodium yoelii yoelii str. 17XNL]
 gi|23483702|gb|EAA19286.1| threonyl-tRNA synthetase, putative [Plasmodium yoelii yoelii]
          Length = 930

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 238/710 (33%), Positives = 378/710 (53%), Gaps = 98/710 (13%)

Query: 4   DIKLTFPDGSIKNFPVHATGS-DVAESISRSLAKKAVAVAI------NGKVCDLSD---- 52
           +I +   DGSIK    + T    +A  IS+ L++ ++   I      N  +CD+ D    
Sbjct: 208 EINIELLDGSIKTGQKNITTPYQIASQISKKLSENSIVAEIIYLDNVNLNLCDIEDDEND 267

Query: 53  -----PVREG-------------SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
                  +EG              I+ +  E P+   +  HS AHI+  +++ ++    +
Sbjct: 268 ETNVDQSQEGILWDMNVPLIGNCKIKFLGIETPQGKKIFWHSSAHILGSSLEKLYGGY-L 326

Query: 95  AIGPIIEDGFYYD-FDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESK 153
            IGP + +GFYYD +       S+   +IE +  +++  +  F K   + E+  ELF  K
Sbjct: 327 TIGPALNEGFYYDIYLGNNSIISENYNKIENEYNKLVKENVEFEKMICTKEEVLELF--K 384

Query: 154 KEAYKVEILESIPAKEN--VTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGD 211
              +K+E+++S    +N   ++Y+ G + DLC GPH+++TG+VK F K++K + AYW G+
Sbjct: 385 YNPFKIELIKSKIKNDNEKTSVYKCGNFIDLCLGPHIKNTGKVKAF-KVLKNSSAYWLGN 443

Query: 212 SNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHR 270
            N   L R+YG ++  + ELT Y+ F+EE++KRDHR + + ++LF   ++ S G  FW  
Sbjct: 444 KNNDSLQRVYGISFQKKTELTDYIKFIEEAKKRDHRNVGKNLNLFFFEKETSPGSGFWFS 503

Query: 271 KGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
            G KI+  LI +MR++ +   Y+E+ TP +    LW+ SGH+ +Y+  MF     +    
Sbjct: 504 HGAKIYNKLIEFMRKEYRIRKYDEVITPNIFSCDLWKTSGHYQNYKNCMFIFNIEN---- 559

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
             + + +KPMNCPGH  +F     SY+ LP+RLA+FG ++RNE +GSL GL RVR F QD
Sbjct: 560 --KEWGMKPMNCPGHCLIFKQLNASYKSLPIRLADFGVLHRNEITGSLSGLTRVRRFQQD 617

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMK 449
           DAH+FC+ + +  E + +   I  +Y  FGF K  + LSTRP K +G    WD AE  +K
Sbjct: 618 DAHIFCSLDHIKTEVVNVLQFIFFVYNLFGF-KYDLYLSTRPPKYIGDIETWDFAEKSLK 676

Query: 450 GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAF 509
             L+    + + ++N     G+GAFYGPK + +L+D++ R  QCGT+Q+DF LP RFN  
Sbjct: 677 EALELA--NVKWKLNE----GDGAFYGPKIDIVLRDSLNRSHQCGTVQLDFQLPIRFNLQ 730

Query: 510 Y---------------VNSHSEKC--------------------------------HPVM 522
           Y               VN+ +                                    P++
Sbjct: 731 YKNKEYGVGQETDSNLVNNSNTDVIEKKEDSTLENIDNNQDPINNQPGGVLKKGFDRPII 790

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSI 582
           IHRA+ GS+ERF+ I++E+  G  P WLSP QAIV  I+    EYA+ I  +L ++   +
Sbjct: 791 IHRAILGSVERFVAILVEHTSGKFPFWLSPRQAIVLPISDKFNEYAKYIHTVLTNNLFDV 850

Query: 583 ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
           + D    T+N KIRE  +K+   I++ G+KE S  ++ +R   +   QKV
Sbjct: 851 DVDISVNTLNKKIREAQLKQYNFILVVGEKEISTNTVTVRDRDNPNDQKV 900


>gi|227877040|ref|ZP_03995129.1| theronyl-tRNA synthetase [Lactobacillus crispatus JV-V01]
 gi|256843644|ref|ZP_05549132.1| threonyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|256850110|ref|ZP_05555540.1| threonyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
 gi|293381761|ref|ZP_06627738.1| threonyl-tRNA synthetase [Lactobacillus crispatus 214-1]
 gi|227863358|gb|EEJ70788.1| theronyl-tRNA synthetase [Lactobacillus crispatus JV-V01]
 gi|256615064|gb|EEU20265.1| threonyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|256713082|gb|EEU28073.1| threonyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
 gi|290921681|gb|EFD98706.1| threonyl-tRNA synthetase [Lactobacillus crispatus 214-1]
          Length = 644

 Score =  411 bits (1056), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 226/640 (35%), Positives = 355/640 (55%), Gaps = 22/640 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS K+F    +  +VA SI+ SL K AV   +NG V  L   +  +  + I+T +
Sbjct: 5   ITLPDGSKKDFDKAVSVKEVASSIATSLGKAAVGAKVNGVVKPLDYEIDNDVEVAILTDK 64

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L ++R + A  +    ++ +PE+++      E GFY D DK+      EL ++EK 
Sbjct: 65  DEEGLDILRATAAFALEAVAKNKYPELRLGQHVADEGGFYVDTDKDDQIKVTELPELEKA 124

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M++++          +   +  ++F  K + YK ++L+ I A + V  Y+ G++ D    
Sbjct: 125 MEKLVKSGQAIEHVVMDKSELEDIF--KDDPYKTDLLKKIDA-DKVDAYKLGDFVDFGFD 181

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
             + +TG++K F KL+ VAGAYW G S+ PML RI+GTA+  +  L + L    E ++RD
Sbjct: 182 ALLPNTGKIKHF-KLLSVAGAYWLGKSSNPMLQRIFGTAFFKEAALKEDLKRRAEIKERD 240

Query: 246 HRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQH 303
           HR + R++D F +  + G+G+ +W  KG  I + +  Y+  R++ D Y+ + TP +++  
Sbjct: 241 HRTIGRDLDFFFVDPKVGAGLPYWMPKGATIRRVVERYIIDREVADGYQHVYTPVLMNLD 300

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
            ++ SGHW  YR +MF        + D     L+PMNCP H+ ++ H ++SYR+LP+R+A
Sbjct: 301 AYKTSGHWAHYRDDMFPPM----DMGDGEMLELRPMNCPSHIQIYKHHIRSYRDLPLRVA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           E G ++R E SG+L GL RVR  T +D H F   +Q+  E  KI  LI+ +YKDF     
Sbjct: 357 ELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQVQTEFAKILKLIMDVYKDFDITDY 416

Query: 424 MVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
             +LS R     +K   +D +W+ ++ ++KG +D +     D +      GE AFYGPK 
Sbjct: 417 YFRLSYRDPKNTDKYFANDEMWERSQKMLKGAMDDL---GLDYVEAE---GEAAFYGPKL 470

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +   K A+G D    TIQ+DF LP RF   YV    E+  PVMIHR + G++ERFI  + 
Sbjct: 471 DIQTKTALGNDETMSTIQLDFMLPERFGLTYVGQDGEEHRPVMIHRGIVGTMERFIAYLT 530

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           E +KG  P WL+P+Q  +  +   A  EYA+++   L       E D RNE + YKIRE 
Sbjct: 531 EIYKGAFPTWLAPVQVKIIPVNLDAHGEYAEKVRQELAKRGFRAEVDTRNEKMGYKIRES 590

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
             +K+P  ++ GD+E    S+ +RR+G+      SL D I
Sbjct: 591 QTQKVPYTLVLGDEEMKNGSVNVRRYGTDEEISKSLTDFI 630


>gi|116514446|ref|YP_813352.1| threonyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
 gi|116093761|gb|ABJ58914.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Lactobacillus
           delbrueckii subsp. bulgaricus ATCC BAA-365]
 gi|325126146|gb|ADY85476.1| Threonyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus 2038]
          Length = 643

 Score =  411 bits (1056), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 226/648 (34%), Positives = 366/648 (56%), Gaps = 27/648 (4%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           L  PDGS K F    + +D+A SIS SLAK AVA  ++G++  L   +  +  + I+T +
Sbjct: 5   LILPDGSKKEFDAAVSVADLASSISTSLAKNAVAGKVDGEIKPLDFQLDTDHEVAILTNK 64

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L+V+R + A ++   V+  +PE+++    + EDGF+ + DKE      EL  +EK 
Sbjct: 65  DAEGLSVLRATVAFVLEALVKDKYPEIKLGQAEVSEDGFFIETDKEDQIKVTELPDLEKA 124

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN--VTLYRQGEWFDLC 183
           +Q+ I          ++  +  E F  K + YK E+L    AKE   V  Y+ G++ D  
Sbjct: 125 LQKAIKNGEAIEHVQVAKSELAEAF--KDDPYKSELL----AKEGDVVDAYKLGDFVDFG 178

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
               + +TG++KKF KL+ VAGAYW+G S+ PML RI+GTA+  + +L   L    E ++
Sbjct: 179 FSALLPNTGKIKKF-KLLSVAGAYWKGKSSNPMLQRIFGTAFFKEADLEADLKRRAEIKE 237

Query: 244 RDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLD 301
           RDHR + R++DLF +  + G+G+ +W  KG  I + +  Y+  +++   Y+ + TP +++
Sbjct: 238 RDHRTIGRDLDLFFVDPKAGAGLPYWMPKGATIRRIIERYIVDKEVAAGYQHVYTPVLMN 297

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
              ++ SGHW  YR +MF        + +     L+PMNCP H+ ++ H ++SYRELP+R
Sbjct: 298 LDAYKTSGHWAHYREDMFPPM----DMGEGEMLELRPMNCPSHIQIYKHHIRSYRELPIR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AE G ++R E SG+L GL RVR  T +D H F   +Q+  E  +   +I+ +Y DF   
Sbjct: 354 IAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQVQEEFARTLQIIMDVYHDFDIN 413

Query: 422 KIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
               +LS R     +K   +D +W+ +++++K  +D +     D +      GE AFYGP
Sbjct: 414 DYYFRLSYRDPKNTDKYFANDEMWERSQSMLKAAMDDM---GLDYVEAE---GEAAFYGP 467

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +   K A+G D    TIQ+DF LP RF   Y+ +  E+  PVMIHR + G++ERFI  
Sbjct: 468 KLDIQTKTALGNDETMSTIQLDFMLPERFELSYIGADGEEHRPVMIHRGIVGTMERFIAY 527

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           + E +KG  P WL+P+QA +  +   A  +YA+++ + L +     E DFRNE + YKIR
Sbjct: 528 LTEIYKGAFPTWLAPVQAEIIPVNLDAHSDYAKKVRDELVAKGFRAEIDFRNEKLGYKIR 587

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           E   +K+P  ++ GD E +  ++ +R +G+      SL + +  L+K+
Sbjct: 588 ESQTQKVPYTLVLGDDEMNAGTVNVRPYGTEEQNSESLAEFMDKLSKD 635


>gi|104774352|ref|YP_619332.1| threonyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|103423433|emb|CAI98306.1| Threonyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
          Length = 643

 Score =  410 bits (1055), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 226/648 (34%), Positives = 366/648 (56%), Gaps = 27/648 (4%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           L  PDGS K F    + +D+A SIS SLAK AVA  ++G++  L   +  +  + I+T +
Sbjct: 5   LILPDGSKKEFDAAVSVADLASSISTSLAKNAVAGKVDGEIKPLDFQLDTDHEVAILTNK 64

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L+V+R + A ++   V+  +PE+++    + EDGF+ + DKE      EL  +EK 
Sbjct: 65  DAEGLSVLRATVAFVLEALVKDKYPEIKLGQAEVSEDGFFIETDKEDQIKVTELPDLEKA 124

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN--VTLYRQGEWFDLC 183
           +Q+ I          ++  +  E F  K + YK E+L    AKE   V  Y+ G++ D  
Sbjct: 125 LQKAIKNGEAIEHVQVAKSELAEAF--KDDPYKSELL----AKEGDVVDAYKLGDFVDFG 178

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
               + +TG++KKF KL+ VAGAYW+G S+ PML RI+GTA+  + +L   L    E ++
Sbjct: 179 FSALLPNTGKIKKF-KLLSVAGAYWKGKSSNPMLQRIFGTAFFKEADLEADLKRRAEIKE 237

Query: 244 RDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLD 301
           RDHR + R++DLF +  + G+G+ +W  KG  I + +  Y+  +++   Y+ + TP +++
Sbjct: 238 RDHRTIGRDLDLFFVDPKAGAGLPYWMPKGATIRRIIERYIVDKEVAAGYQHVYTPVLMN 297

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
              ++ SGHW  YR +MF        + +     L+PMNCP H+ ++ H ++SYRELP+R
Sbjct: 298 LDAYKTSGHWAHYREDMFPPM----DMGEGEMLELRPMNCPSHIQIYKHHIRSYRELPIR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AE G ++R E SG+L GL RVR  T +D H F   +Q+  E  +   +I+ +Y DF   
Sbjct: 354 IAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQVQEEFARTLQIIMDVYHDFDIN 413

Query: 422 KIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
               +LS R     +K   +D +W+ +++++K  +D +     D +      GE AFYGP
Sbjct: 414 DYYFRLSYRDPKNTDKYFANDEMWERSQSMLKAAMDDM---GLDYVEAE---GEAAFYGP 467

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +   K A+G D    TIQ+DF LP RF   Y+ +  E+  PVMIHR + G++ERFI  
Sbjct: 468 KLDIQTKTALGNDETMSTIQLDFMLPERFELSYIGADGEEHRPVMIHRGIVGTMERFIAY 527

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           + E +KG  P WL+P+QA +  +   A  +YA+++ + L +     E DFRNE + YKIR
Sbjct: 528 LTEIYKGAFPTWLAPVQAEIIPVNLDAHSDYAKKVRDELVAKGFRAEIDFRNEKLGYKIR 587

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           E   +K+P  ++ GD E +  ++ +R +G+      SL + +  L+K+
Sbjct: 588 ESQTQKVPYTLVLGDDEMNAGTVNVRPYGTEEQNSESLAEFMGKLSKD 635


>gi|221056250|ref|XP_002259263.1| threonine--trna ligase [Plasmodium knowlesi strain H]
 gi|193809334|emb|CAQ40036.1| threonine--trna ligase, putative [Plasmodium knowlesi strain H]
          Length = 888

 Score =  410 bits (1055), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 229/632 (36%), Positives = 354/632 (56%), Gaps = 69/632 (10%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSD 117
           IE +  E+  +     HS AHI+  +++ ++    + IGP +++GFYYD +  +   +++
Sbjct: 246 IEFLNLENEEAKKTFWHSSAHILGSSLEKLFGGY-LTIGPPLKEGFYYDIYLGDFSITNE 304

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES-IPAKENVTLYRQ 176
           +  +IE++  ++I +++ F K   + ++  ELF+     +K+E+++S IP  +  ++Y+ 
Sbjct: 305 DYKKIEEEFNKLIKQNAEFEKLICTKDEVMELFQY--NPFKLELIKSKIPENKKTSVYKC 362

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           G + DLC GPH++STG+ K F K++K + AYW G+ N   L RIYG  +  + EL  YL 
Sbjct: 363 GNFIDLCLGPHIKSTGKAKAF-KVLKNSAAYWLGNKNNDSLQRIYGITFQKKTELNDYLN 421

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRRKIK-DDYEEI 294
           FLEE++KRDHR + +++  F   +D S G  FW   G KI+  L+ ++RR+ +   Y+E+
Sbjct: 422 FLEEAKKRDHRNVGKKLHFFFFDKDTSPGSCFWLPHGAKIYNKLVDFIRREYRIRMYDEV 481

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
            TP V    LW+ SGH+ +Y+  MF          + + + +KPMNCPGH  +F     S
Sbjct: 482 ITPNVFSCDLWRTSGHYQNYKDCMFIFNV------EQKEWGMKPMNCPGHCIMFKQLNAS 535

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YR LP+RLA+FG ++RNE SGSL GL RVR F QDD+H+FCT +Q+  E L   + I  I
Sbjct: 536 YRSLPIRLADFGVLHRNEISGSLSGLTRVRRFQQDDSHIFCTFDQIKEEVLNTLHFIFFI 595

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           Y  FGF K  + LSTRP+K +G+ + WD AE  +K  L++   S   +IN     G+GAF
Sbjct: 596 YDLFGF-KYELFLSTRPKKFIGNISTWDFAEQGLKDALNSANISW--KINE----GDGAF 648

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH-------------------- 514
           YGPK + +L+D+I R  QCGTIQ+DF LP RFN  Y N                      
Sbjct: 649 YGPKIDILLRDSINRTHQCGTIQLDFQLPCRFNLQYKNKDFGALNEGDNAESGTMKREEV 708

Query: 515 SEKC----------------------------HPVMIHRAVFGSIERFIGIMIENFKGNL 546
           +EK                              PV+IHRA+ GS+ERF+ I+IE+  G L
Sbjct: 709 AEKGEGNQPSQNKGSDTNLPTDTAEQLKKGFDRPVIIHRAILGSVERFVAILIEHTAGKL 768

Query: 547 PLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPII 606
           P W+SP QAIV  ++    +YA  +   L +H   +E D    T+N KIRE  + +   I
Sbjct: 769 PFWISPRQAIVLPVSDKFNDYANYVYQTLNNHFFDVEIDTSLNTLNKKIREAQLNQFNFI 828

Query: 607 IICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           ++ G+KE +  ++ +R        +V  L+ +
Sbjct: 829 LVVGEKELTTNTVTVRNRDDQNNHEVCSLEEL 860


>gi|68070445|ref|XP_677134.1| threonine--tRNA ligase [Plasmodium berghei strain ANKA]
 gi|56497130|emb|CAH95381.1| threonine--tRNA ligase, putative [Plasmodium berghei]
          Length = 780

 Score =  410 bits (1054), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 240/710 (33%), Positives = 378/710 (53%), Gaps = 98/710 (13%)

Query: 4   DIKLTFPDGSIKNFPVHATGS-DVAESISRSLAKKAVAVA------INGKVCDL------ 50
           +I +   DGSIK    + T    +A  IS+ L++ ++         IN  +CD+      
Sbjct: 58  EINIELLDGSIKIGQKNVTTPYQIASQISKKLSENSIVAKVIYLDNINLNLCDIENDHFE 117

Query: 51  ---SDPVREG-------------SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
              +D  + G              I+ +  E      V  HS AHI+  +++ ++    +
Sbjct: 118 EKDNDKSQAGILWDMNVPLIGNCKIKFLGIETIEGKKVFWHSSAHILGSSLEKLYGGY-L 176

Query: 95  AIGPIIEDGFYYD-FDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESK 153
            IGP + +GFYYD +       S+   +IE +  +++  +  F K   + E+  ELF  K
Sbjct: 177 TIGPALSEGFYYDIYLGNNSILSENYNKIENEYNKLVKENVEFEKMVCTKEEVLELF--K 234

Query: 154 KEAYKVEILESIPAKEN--VTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGD 211
              +K+E+++S    +N   ++Y+ G++ DLC GPH+++TG+VK F K++K + AYW G+
Sbjct: 235 YNPFKIELIKSKIRNDNEKTSVYKCGDFIDLCLGPHIKNTGKVKAF-KVLKNSSAYWLGN 293

Query: 212 SNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHR 270
            N   L R+YG ++  + ELT Y+ F+EE++KRDHR + + ++LF   ++ S G  FW  
Sbjct: 294 KNNDSLQRVYGISFQKKTELTDYIKFIEEAKKRDHRNVGKNLNLFFFEKETSPGSGFWFA 353

Query: 271 KGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
            G KI+  LI +MR++ +   YEE+ TP +    LW+ SGH+ +Y+  MF     +    
Sbjct: 354 HGAKIYNKLIEFMRKEYRIRKYEEVITPNIFSCDLWKTSGHYQNYKNCMFIFNIEN---- 409

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
             + + +KPMNCPGH  +F     SY+ LP+RLA+FG ++RNE +GSL GL RVR F QD
Sbjct: 410 --KEWGMKPMNCPGHCLIFKQLNASYKSLPIRLADFGVLHRNEITGSLSGLTRVRRFQQD 467

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMK 449
           DAH+FC+ + +  E + +   I  +Y  FGF K  + LSTRP K +G    W+ AE  +K
Sbjct: 468 DAHIFCSLDHIKTEVVNVLQFIFFVYNLFGF-KYDLYLSTRPPKYIGDIDTWNFAEKSLK 526

Query: 450 GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAF 509
             L+    + + ++N     G+GAFYGPK + +LKD++ R  QCGT+Q+DF LP RFN  
Sbjct: 527 EALELA--NVEWKLNE----GDGAFYGPKIDIVLKDSLNRSHQCGTVQLDFQLPIRFNLQ 580

Query: 510 Y-----------------------------------------VNSHSEKC------HPVM 522
           Y                                         +NS S          P++
Sbjct: 581 YKNKEYGVGQETDSNLVNDSNIDPIEKKEDSTLENIDNNEDAINSQSTAILKKGFDRPII 640

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSI 582
           IHRA+ GS+ERF+ I++E+  G  P WLSP QAIV  I+    EYA+ I N+L ++   +
Sbjct: 641 IHRAILGSVERFVAILVEHTSGKFPFWLSPRQAIVLPISDKFNEYAKYIHNVLTNNLFDV 700

Query: 583 ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
           + D    T+N KIRE  +K+   I++ G+KE S  ++ +R   +   QKV
Sbjct: 701 DVDISVNTLNKKIREAQLKQYNFILVVGEKEISTNTVTVRDRDNPNDQKV 750


>gi|330932301|ref|XP_003303723.1| hypothetical protein PTT_16056 [Pyrenophora teres f. teres 0-1]
 gi|311320083|gb|EFQ88182.1| hypothetical protein PTT_16056 [Pyrenophora teres f. teres 0-1]
          Length = 776

 Score =  410 bits (1053), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 241/682 (35%), Positives = 365/682 (53%), Gaps = 66/682 (9%)

Query: 5   IKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAING-----KVCDLSDPVREG- 57
           I +T  DG +I+      + +D+A +I++SL ++ V   ++       + DL  P+ +  
Sbjct: 87  ITITLEDGKNIEGESWVTSPADIARNIAKSLFERTVVARLDKGTPEETLWDLERPLEKSC 146

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSD 117
            +E++  +DP    V  HS AHI+ EA +  +    + IGP IEDGFYY+       + D
Sbjct: 147 KLELLPFDDPEGKKVFWHSSAHILGEASERRFG-CDLCIGPPIEDGFYYEMALPDNAAVD 205

Query: 118 --ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLY 174
             +   +E  +  I+    PF +  LS +   E+F+S K  YK  I+ + I    + T+Y
Sbjct: 206 PADHKPLETIVSSIVKEKQPFERLTLSKDDLLEMFKSNK--YKQHIIKDKIADGTSTTVY 263

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
           R G   DLCRGPHV  TG++K+F K+MK + +Y+ GD+    L RIYG ++  +  +  +
Sbjct: 264 RNGPLIDLCRGPHVPHTGRIKQF-KVMKNSASYFLGDAKNDSLQRIYGVSFPDKDAMQAH 322

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEE 293
           L FLEE+ KRDHRK+ +E +LF   E   G  F+   G  I+ TL +++R +     Y+E
Sbjct: 323 LKFLEEAAKRDHRKIGKEQELFFFHEFSPGSCFFLPHGQIIYNTLQAFLREEYWNRGYQE 382

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           + +P + +  LW+ SGHW  Y  +MF      +       +ALKPMNCPGH  +F H  +
Sbjct: 383 VGSPNMYNSALWKISGHWQHYADDMFTFDVEKEK------WALKPMNCPGHCLIFKHRER 436

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYRELP+R+A+FG ++RNE SG+L GL RVR F QDD HVFCT++Q+  E   + + + +
Sbjct: 437 SYRELPIRMADFGILHRNEASGALTGLTRVRRFQQDDTHVFCTQDQITEEISALFDFLRA 496

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD--TIKNSSQDRINTGVLLGE 471
           +Y  FGF    +KLSTRPE  +G    WD AE  +   L+  T    S   +N     G+
Sbjct: 497 VYGKFGF-TFKMKLSTRPEGFLGDIETWDKAEGKLTEALNQFTAAGGSAWELNP----GD 551

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS---------------HSE 516
           GAFYGPK +  + DA+ R++QC TIQ+DF LP++F   Y+ S               H E
Sbjct: 552 GAFYGPKIDITISDALKREFQCATIQLDFQLPNQFELEYMTSEVIPVKNKDQLQEGGHIE 611

Query: 517 K-----------------------CHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI 553
           +                         PVMIHRA++GS ERFI I+ E+F G  P WLSP 
Sbjct: 612 QKKEKLEGADVTIPKKIKEPQPGYARPVMIHRAIYGSFERFIAILTEHFAGRWPFWLSPR 671

Query: 554 QAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
           Q ++  +   A +Y +E+   L+ H L  + D    T+  KIR   +     I++ G +E
Sbjct: 672 QVMIIPVMPGANDYVKEVQAELRKHRLHADIDISGNTMQKKIRTAQLALYNFIMVVGAEE 731

Query: 614 ASERSIGIRRFGSTTTQKVSLL 635
              R++  R      TQ+  ++
Sbjct: 732 QQARAVNWRNRDDQETQQRGVI 753


>gi|115389848|ref|XP_001212429.1| threonyl-tRNA synthetase [Aspergillus terreus NIH2624]
 gi|114194825|gb|EAU36525.1| threonyl-tRNA synthetase [Aspergillus terreus NIH2624]
          Length = 713

 Score =  409 bits (1052), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 223/660 (33%), Positives = 360/660 (54%), Gaps = 41/660 (6%)

Query: 4   DIKLTFPDGSIKNFPVHA---TGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           ++ L   +G+    P  A   T   + +++ + ++   V   ++G++ DL+ P+ RE ++
Sbjct: 52  NVTLDLGNGNTSVVPAKAWETTPGQLLKNVPKEVSASVVIAKVDGELFDLNRPLERECTV 111

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF--DKEQPFSSD 117
             +  E P    V  HS AH + EA +  +    ++ GP    GF+YD      +     
Sbjct: 112 AYVPFEHPEGREVFWHSSAHCLGEACECQY-GCLLSHGPPTPQGFFYDMAMPDNRVVRES 170

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           + + ++ K   I      F +  +S E  +++F   K  YK+  ++ +   E  T+YR G
Sbjct: 171 DWSSLDSKASRIFKEKQSFDRLEVSKENLKKMFAYSK--YKLHYIDKLVTGEKSTVYRCG 228

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
              DLCRGPH+++TG++K F K+M+ + AY+ GD     L RI G A+  ++++ ++L F
Sbjct: 229 TLVDLCRGPHIQNTGKIKTF-KIMQNSSAYFLGDQTNDSLQRIRGVAFPDKKQMQEHLKF 287

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINT 296
           LEE+EKR+H ++ ++ +LF   +   G  F    G KIF  L + +R +  K  Y+E+ T
Sbjct: 288 LEEAEKRNHLRIGKDQELFFFDDVSPGCAFLLPNGTKIFNALQTLLRSEYRKRGYQEVQT 347

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P + D  +W+ SGHW  Y+ +MF +        + R +ALKPMNCPGH  +F H  +SYR
Sbjct: 348 PNMYDVGIWKTSGHWAHYKDDMFKLDV------EKREWALKPMNCPGHFVLFGHRERSYR 401

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ELP+R+A+FG ++RNE SG+L GL RVR F QDD H+FCT++Q+ +E   + + + SIY 
Sbjct: 402 ELPLRIADFGVLHRNEASGALSGLTRVRKFQQDDTHIFCTQDQIMSEIEGLFDFLQSIYG 461

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
            FGF    +KLSTRPEK +G    W+ AE  +K  +   K       +  +  G+GAFYG
Sbjct: 462 LFGF-TFKLKLSTRPEKYLGELETWNYAEEQLKAAMTKFKGD-----DWTIDEGDGAFYG 515

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE----------------KCHP 520
           PK +  + DA+ R++QC TIQ+D+  P  F   Y+                     +  P
Sbjct: 516 PKIDITIADALKREFQCATIQLDYQAPLNFKLEYMTHERADVKDGETAKPGEPGPGRARP 575

Query: 521 VMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHL 580
           V+IHRA+ GS ERF+GI+IE+F G  P W+SP Q ++  +  +  +Y +E+  +L+   L
Sbjct: 576 VVIHRAIIGSFERFLGILIEHFGGKWPFWISPRQILIVPVMPAVNDYVEELQTILRGDKL 635

Query: 581 SIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
           +++ D    T+  KIR   + +   I + G  E   RS+ IR      TQK  ++  IP+
Sbjct: 636 NVDIDISGNTMQKKIRNGQLAQYNFIFVVGASEKESRSVNIRNRDDPATQKQGVM--IPL 693


>gi|160894708|ref|ZP_02075483.1| hypothetical protein CLOL250_02259 [Clostridium sp. L2-50]
 gi|156863642|gb|EDO57073.1| hypothetical protein CLOL250_02259 [Clostridium sp. L2-50]
          Length = 591

 Score =  409 bits (1052), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 220/586 (37%), Positives = 361/586 (61%), Gaps = 27/586 (4%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQIEKKMQE 128
           L  + HSCAH+MA+AV+ ++P  +  +GP++++GFYYD D  +   + D +A IEK+M++
Sbjct: 10  LNTLNHSCAHVMAQAVKHLYPHAKFWVGPVVKEGFYYDIDLGDDVVNDDVIAAIEKEMKK 69

Query: 129 IIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           I        ++ ++  +A E+F  K + YK++++E +    N+T+Y QG++ DLCRGPHV
Sbjct: 70  ICKESKKIYRREVTKAEALEMF--KDDFYKLDLIEGL-EDGNITVYDQGDFTDLCRGPHV 126

Query: 189 RSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRK 248
            +T ++ K FKL+K +G YW+GD+   ++ RIYG  + T +EL ++L  LEE++ RDHRK
Sbjct: 127 DNT-KLCKNFKLVKYSGVYWKGDAKNHVMQRIYGVCFPTAEELEEHLKLLEEAKDRDHRK 185

Query: 249 LAREMDLFHIAED--GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLW 305
           + +EM+LF +++D  G G+  +  KG+ ++Q L +Y++ K  K  Y  + TP V   +L+
Sbjct: 186 IGKEMNLF-MSDDLVGRGLPMFLPKGYIVWQELENYIKNKERKLGYRHVMTPCVGTVNLY 244

Query: 306 QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEF 365
           + SGHWD Y+ NMF     +       +F L+PMNCP H+ ++ + + SY++LP+R+ E 
Sbjct: 245 KTSGHWDHYKDNMFPAMEVEG-----ESFVLRPMNCPHHMMIYANKMHSYKDLPIRIGEI 299

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
              +R E SG+L G+ R R F Q+DAH+F T EQ+ +E  ++ +LI   YKDF       
Sbjct: 300 AHDFRFEASGTLKGIERGRHFCQNDAHLFVTPEQIESEFKQVVDLIFDTYKDFNITDYRC 359

Query: 426 KLSTR-PEKRV---GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            LS R PE +V     D +W+ AE+ ++ VLD I     + I      GE AFYGPK + 
Sbjct: 360 VLSLRDPEDKVKYHDDDEMWNTAEDALRKVLDDIGIEYTEEI------GEAAFYGPKLDV 413

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +K AIG ++   T Q+DF LP++FN  Y++    K  PV++HRA+ GS++RF+  ++E 
Sbjct: 414 NVKPAIGNEYTLSTCQLDFCLPAKFNLTYIDKDGTKKTPVVLHRAILGSLDRFMAYILEE 473

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVE---YAQEIANLLKSHHLSIETDFRNETINYKIREH 598
            KGNLPLWL+P+QA +  + +   E   YA E+ + L  +++ +E D R E + Y++R  
Sbjct: 474 TKGNLPLWLAPVQARILPVKNEDEELNAYAHELYDFLDDNNIRVEIDERAEKLGYRVRAA 533

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            ++K+P +II G  E +++++  R  G   T  V + + + +L  E
Sbjct: 534 QVEKVPYLIILGKNEVNDKTVSYRLHGEQKTTTVPMDEFLAMLQDE 579


>gi|227889526|ref|ZP_04007331.1| threonyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
 gi|227850004|gb|EEJ60090.1| threonyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
          Length = 643

 Score =  409 bits (1052), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 223/628 (35%), Positives = 352/628 (56%), Gaps = 23/628 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPE 65
           +T PDGS K+F    +  ++A SI+ SL K AV   ING +  L   V E  +  IIT +
Sbjct: 5   VTLPDGSKKDFDKAVSVKELASSIATSLGKAAVGAKINGVMKPLDYIVDEDVNAAIITDK 64

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L ++R + A ++    +  +PE+++ +    E GF+ D DKE      EL ++EK 
Sbjct: 65  DEEGLDILRATAAFLLEAVAKRKYPELRLGMHEADEGGFFVDTDKEDQIKVTELPELEKA 124

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           MQ+ I          +   +  E+F  K + +K+++L+    ++ V +Y+ G++ D    
Sbjct: 125 MQKAIKNGEKIEYTSMKKSELEEIF--KDDQFKLDLLKD--EEDEVAVYKLGDFVDFGFD 180

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
             + +TG++K F KL+ VAGAYW G S+ PML RI+GTA+  +  L + L    E ++RD
Sbjct: 181 ALLPNTGKIKNF-KLLSVAGAYWLGKSSNPMLQRIFGTAFFKKAALDEDLKRRAEIKERD 239

Query: 246 HRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQH 303
           HR + R++DLF +  + G+G+ +W  KG  I + +  Y+  +++ D YE + TP +++  
Sbjct: 240 HRTIGRDLDLFFVDPKVGAGLPYWMPKGATIRRVVERYIVDKEVADGYEHVYTPVLMNVD 299

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
            ++ SGHW  YR +MF        + D     L+PMNCP H+ ++ H ++SYRELP+R+A
Sbjct: 300 AYKTSGHWAHYRDDMFPPM----DMGDGEMLELRPMNCPSHIQIYKHHIRSYRELPIRIA 355

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           E G ++R E SG+L GL RVR  T +D H F   +Q+  E  K+  LI+ +YKDF     
Sbjct: 356 ELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQIREEFAKVLKLIMDVYKDFDITDY 415

Query: 424 MVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
             +LS R     +K   +D +W+ +++++K  +D +     D +      GE AFYGPK 
Sbjct: 416 YFRLSYRDPKNTDKYYANDEMWERSQSMLKAAMDDL---GLDYVEAE---GEAAFYGPKL 469

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +   K A+G D    TIQ+DF LP RF   YV    E+  PVMIHR + G++ERFI  + 
Sbjct: 470 DIQTKTALGNDETMSTIQLDFMLPERFGLTYVGQDGEEHRPVMIHRGIVGTMERFIAYLT 529

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           E +KG  P WL+P+QA +  +   A   YA ++   L       E D RNE + YKIRE 
Sbjct: 530 EIYKGAFPTWLAPVQAEIIPVNEEAHGAYADKVREELAKRGFRAEVDHRNEKLGYKIRES 589

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGS 626
             +K+P  ++ GD+E +   + +RR+G+
Sbjct: 590 QTQKVPYTLVLGDEEMNANGVNVRRYGT 617


>gi|19074578|ref|NP_586084.1| THREONYL tRNA SYNTHETASE [Encephalitozoon cuniculi GB-M1]
 gi|74697534|sp|Q8SRH2|SYTC_ENCCU RecName: Full=Probable threonyl-tRNA synthetase, cytoplasmic;
           AltName: Full=Threonine--tRNA ligase; Short=ThrRS
 gi|19069220|emb|CAD25688.1| THREONYL tRNA SYNTHETASE [Encephalitozoon cuniculi GB-M1]
          Length = 640

 Score =  409 bits (1051), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 223/589 (37%), Positives = 348/589 (59%), Gaps = 25/589 (4%)

Query: 36  KKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           K  ++  I+G   D+S  + ++  +E++T ED  +  +  HS AH++  A+ +++P+ ++
Sbjct: 35  KDVISCRIDGVYSDMSSEILKDCKLELMTFEDDGARDIFWHSSAHVLGNALVNLYPDAKL 94

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
             GP IE+GF+YD D   P SS++  +IE++M +I+ ++  F +   S E+  E +  + 
Sbjct: 95  VHGPPIEEGFFYDVDVTDPISSEDYEKIEEEMVKIMKKNYRFERVIKSKEELLEAY--RD 152

Query: 155 EAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNR 214
              K   +     KE+ ++YR G++FD+C GPH+RSTG +K   K++K + AY+  D N 
Sbjct: 153 NPCKTHFIMKGVDKES-SVYRNGDFFDMCLGPHIRSTGVIKAV-KVLKNSSAYFLNDPNL 210

Query: 215 PMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWK 274
             L RIY   + ++  + +YL   EE+++RDHRK+  E+DLF  ++   G  F+   G  
Sbjct: 211 KSLQRIYAITFPSKGMMDEYLKRKEEAKERDHRKIGTELDLFFFSKYSPGSCFFLPNGTT 270

Query: 275 IFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           ++ TLI ++R +  K  ++E+ TP +    LW++SGH  +Y+ NMF ++          T
Sbjct: 271 MYNTLIEFLREEYRKRGFKEVITPNIFCTQLWEESGHLQNYKENMFIIEGD--------T 322

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
           FALKPMNCPGH  +F H   S+R+LP+RLA+FG ++RNE SG+L GL RVR F QDDAH+
Sbjct: 323 FALKPMNCPGHCVMFRHQDHSFRDLPLRLADFGVLHRNELSGTLTGLTRVRRFQQDDAHI 382

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
           FCTK+Q+  E       +  +Y  FGF   +V LSTRPEK +GS   WD AE  +   +D
Sbjct: 383 FCTKDQVKEEIKGCLEFLSFVYGVFGFRFELV-LSTRPEKYLGSVDEWDRAEKALADAMD 441

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS 513
             +++   +IN     G+GAFYGPK +  L DA+GR  QC TIQ+DF LP RF   Y +S
Sbjct: 442 --ESNMPFKINA----GDGAFYGPKIDITLHDALGRRIQCATIQLDFQLPQRFELKYRDS 495

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIAN 573
             +   PV+IHRA+ GSIER I I++E+F   LP W+SP Q  +  + +   +Y  ++ +
Sbjct: 496 DGQCRTPVIIHRAILGSIERMIAIILESFGKRLPFWISPRQIAIVNMGNP--DYVGKVRS 553

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           +L    L +  D    T++ +IR        ++ + G KEA    I IR
Sbjct: 554 VLARFRLDVIDD--GNTLSKRIRTAETSGYALVCVVGKKEAEANEINIR 600


>gi|323339586|ref|ZP_08079860.1| threonine--tRNA ligase [Lactobacillus ruminis ATCC 25644]
 gi|323092981|gb|EFZ35579.1| threonine--tRNA ligase [Lactobacillus ruminis ATCC 25644]
          Length = 685

 Score =  409 bits (1051), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 225/645 (34%), Positives = 362/645 (56%), Gaps = 21/645 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIEIITP 64
           ++L FPDG++K F   AT  DVA SIS SLAKKAV   ++GK+ DL+  + +GSIEI+  
Sbjct: 42  MELKFPDGTVKEFEDGATVKDVAASISMSLAKKAVCGKLDGKLVDLNQKLSDGSIEIVAK 101

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQIE 123
           +       + H+ A ++A A+  ++P V+   G + E GFY+D DKE       +  ++ 
Sbjct: 102 DSDDGRIALWHTAAVVLAAALHDLYPNVKFGEGGVTEHGFYFDTDKEDGQVGEADFEKLT 161

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           KKM+EI+        +++ ++    L   + + Y+ EI++       V  ++     D  
Sbjct: 162 KKMEEIVKAKEKI--EFVEYDLDEALKLVENDEYQTEIVKENAEDGKVYGHKLLNHVDFT 219

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
               +   G+VK  FK++ VAGAYW+G S+ PML RIYGTA++ Q+EL + L   +E+ +
Sbjct: 220 SPVSLEDAGKVK-VFKVLSVAGAYWKGASSNPMLQRIYGTAFSKQKELDEELKRQQEAHE 278

Query: 244 RDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLD 301
           RDHR +   +DLF +  + G+G+ +W   G  I +T+  Y+  +++   YE + TP + +
Sbjct: 279 RDHRVIGNNLDLFFVDPKVGAGLPYWMPNGATIRRTIERYIIDKEVSWGYEHVYTPILAN 338

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             L++QSGHWD YR +MF        + D     L+PMNCP H+ ++N  ++SYR+LP+R
Sbjct: 339 VDLYKQSGHWDHYREDMFPPM----DMGDGELLELRPMNCPSHIQIYNRHIRSYRDLPLR 394

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AE G ++R E SG+L GL RVR  T +D H F T +Q+  E  +   L++ +Y DF   
Sbjct: 395 IAELGMMHRYEKSGALTGLSRVREMTLNDGHTFVTPDQIEAEFKRTLQLMVEVYHDFNIN 454

Query: 422 KIMVKLSTRPEKRV----GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
               +LS R  K        D +W+ ++ ++K  +D +       +      GE AFYGP
Sbjct: 455 DYRFRLSYRDPKNTHKYYDDDEMWEKSQRMLKAAMDDLG------LEYFEAEGEAAFYGP 508

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +   K A+G +    TIQ+DF LP RF+  YV +  E+  PVMIHR +  ++ERF   
Sbjct: 509 KLDVQTKTALGGEETLSTIQLDFLLPERFDLKYVGADGEEHRPVMIHRGIVSTMERFTAY 568

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           + E +KG  P WL+P Q  V  +      +YA+++A+ L +  + +  D RNE + YKIR
Sbjct: 569 LTEMYKGAFPTWLAPKQVEVIPVNLDLHTDYARKLASALAARQIRVSVDDRNEKMGYKIR 628

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           +  + K+P  ++ GD E  + ++ +RR+G   T+ ++  D   IL
Sbjct: 629 QAQVNKVPYTLVVGDNEKEQGTVTVRRYGQEKTETMAFDDFKKIL 673


>gi|33519811|ref|NP_878643.1| threonyl-tRNA synthetase [Candidatus Blochmannia floridanus]
 gi|33504156|emb|CAD83418.1| threonyl-tRNA synthetase [Candidatus Blochmannia floridanus]
          Length = 410

 Score =  409 bits (1050), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 181/387 (46%), Positives = 268/387 (69%), Gaps = 13/387 (3%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           ++ +K DHR L+ ++DL+H+ ED  G++FWH  GW IFQ L +++R+K++   Y+E+ +P
Sbjct: 5   QKIKKYDHRNLSHQLDLYHLQEDAPGMVFWHVNGWTIFQELKNFIRKKLQQYQYQEVKSP 64

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW+++GHWD+Y  ++F     +      R + +KPMNCPGH+ +FNHGLK+Y++
Sbjct: 65  TMIDRVLWKKTGHWDNYYEHIFTTDSEN------RKYCIKPMNCPGHIQIFNHGLKTYKD 118

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNE SGSLHGLMR+R FTQDDAH+FC   Q+ NE      ++  IY  
Sbjct: 119 LPIRMAEFGSCHRNELSGSLHGLMRIREFTQDDAHIFCALTQIPNELYHCIKMMYDIYHV 178

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           F F+KI+VKLSTRP+KR+G D++WD AE  +  VL       Q+ I       +GAFYGP
Sbjct: 179 FNFKKIIVKLSTRPKKRIGEDSVWDVAEQYLSDVL------KQNNIEFTYQPNDGAFYGP 232

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+IL D++ R WQCGTIQ+DF LP    + Y+++++    PV+IHRAV GSIERFIG+
Sbjct: 233 KIEFILLDSLKRSWQCGTIQLDFTLPKLLESKYIDNNNSYQTPVIIHRAVLGSIERFIGV 292

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E + G  P WL+PIQ I+  +T   + Y  E+A  L + +  ++ D RNETI++KIR 
Sbjct: 293 ITEEYLGFFPTWLAPIQIIIMNVTDGQISYVIELAKKLSNKNFRVKIDLRNETISFKIRS 352

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRF 624
           H I +IP ++ICG+ E +++++ IR F
Sbjct: 353 HIIHRIPYMLICGNAEMNQKTVSIRTF 379


>gi|308160139|gb|EFO62643.1| Threonyl-tRNA synthetase [Giardia lamblia P15]
          Length = 695

 Score =  409 bits (1050), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 235/643 (36%), Positives = 364/643 (56%), Gaps = 46/643 (7%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESI--SRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +TFPDG     P   T  DVA+ +  ++ +  K +A   + ++ D+S  + +   +E +T
Sbjct: 31  VTFPDGKTTEIPAAFTALDVAKQVVKNKKVYSKFLAAVRDDEIIDMSARLGKTCKLEFLT 90

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD--FDKEQPFSSDELAQ 121
            +DPR+  V  HS AH++  A++  + +  +  GP I+ GF+YD  F+       + L Q
Sbjct: 91  FDDPRAREVFWHSSAHLLGYALEKTF-QAHLGHGPAIDSGFFYDAFFENSLKMEPESLIQ 149

Query: 122 IEKKMQEIIAR------DSP---FLKQYLSHEKARELFESKKEAYKVEILESIPAKENVT 172
           ++K   EI+ +      DSP   F +  ++ ++A +LF   K   ++ I + +   E  +
Sbjct: 150 LDKAAAEIVKQAAAAPSDSPVRRFTRLEVTKQEALDLFSYSKLKSEL-ISDHVQDGEMCS 208

Query: 173 LYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELT 232
           +Y+ G++ D CRGPH+   G ++ F K M  + AY++GD NR  + R+Y  A+ ++ +L 
Sbjct: 209 VYQCGDFVDFCRGPHIPDLGLIQAF-KCMYSSAAYFKGDQNRESMQRVYAVAFPSKDQLD 267

Query: 233 QYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DY 291
           +++  LEE+++RDHR LA+EMDLF   +   G   +   G +I++ L +++R  + + DY
Sbjct: 268 KHIELLEEAKRRDHRNLAKEMDLFMTHKYAPGAPMFMNNGTRIYRKLEAFIRELLHEFDY 327

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           EE+ TP  L+  LW  SGH   Y+ NMF ++  + T      + LKPMNCP H  ++ + 
Sbjct: 328 EEVMTPTFLNTDLWGISGHLQHYKENMFLLERKEKTDPQ---YGLKPMNCPCHCLLYKNQ 384

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI 411
             S +ELP+R+AEFG V+RNE SG+L GL RV  F QDDAH+FCT +Q+  E   +   I
Sbjct: 385 HHSVQELPIRMAEFGVVHRNELSGALSGLTRVVRFEQDDAHIFCTVDQIEQEMTGLIEFI 444

Query: 412 ISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL-- 469
             +Y  FG +   + LS RPEK++GSD LWD AE  ++ VL           NTG+    
Sbjct: 445 KRVYTPFGID-FALSLSLRPEKKMGSDELWDRAEGTLRKVL----------TNTGLDFKE 493

Query: 470 --GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPS--RFNAFYVNSHSEKC------H 519
             G+GAFYGPK +  L DA+GR  QCGTIQ+DFNLPS  RF+  Y + + EK       H
Sbjct: 494 NPGDGAFYGPKIDVHLTDALGRQHQCGTIQLDFNLPSKDRFDLLY-SVYDEKTGSVKQEH 552

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTI-TSSAVEYAQEIANLLKSH 578
           PVMIHRA+ GS+ERF+ I+IEN  G  P W+SP Q +V  +     + YA+ +     S 
Sbjct: 553 PVMIHRAILGSVERFMAILIENTGGRFPFWISPRQIMVIPLHGGDIIAYAKTVRERYHSK 612

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
              ++ D  +E +  KI     KK   I++ G +E    S+ +
Sbjct: 613 GYFVDLDVSSEKMEKKIAVAWNKKYNFIMVVGAQEKGTCSVAL 655


>gi|295693387|ref|YP_003601997.1| threonyl-tRNA synthetase [Lactobacillus crispatus ST1]
 gi|295031493|emb|CBL50972.1| Threonyl-tRNA synthetase [Lactobacillus crispatus ST1]
          Length = 645

 Score =  409 bits (1050), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 225/640 (35%), Positives = 353/640 (55%), Gaps = 22/640 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPE 65
           +T PDGS K+F    +  +VA SI+ SL K AV   +NG V  L   +     + I+T +
Sbjct: 5   ITLPDGSKKDFDKAVSVKEVASSIATSLGKAAVGAKVNGVVKPLDYEIDNNVEVAILTDK 64

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L ++R + A  +    ++ +PE+++      E GFY D DK+      EL ++EK 
Sbjct: 65  DEEGLDILRATAAFALEAVAKNKYPELRLGQHVADEGGFYVDTDKDDQIKVTELPELEKA 124

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+++I          +   +  ++F  K + YK ++L+ I + + V  Y+ G++ D    
Sbjct: 125 MEKLIKSGQAIEDVVMDKSELEDIF--KDDPYKSDLLKEIDS-DKVDAYKLGDFVDFGFD 181

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
             + +TG++K F KL+ VAGAYW G S+ PML RI+GTA+  +  L + L    E ++RD
Sbjct: 182 ALLPNTGKIKHF-KLLSVAGAYWLGKSSNPMLQRIFGTAFFKEAALKEDLKRRAEIKERD 240

Query: 246 HRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQH 303
           HR + R++DLF +  + G+G+ +W  KG  I + +  Y+  R++ D Y+ + TP +++  
Sbjct: 241 HRTIGRDLDLFFVDPKVGAGLPYWMPKGATIRRVVERYIIDREVADGYQHVYTPVLMNLD 300

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
            ++ SGHW  YR +MF        + D     L+PMNCP H+ ++ H ++SYR+LP+R+A
Sbjct: 301 AYKTSGHWAHYRDDMFPPM----DMGDGEMLELRPMNCPSHIQIYKHHIRSYRDLPLRVA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           E G ++R E SG+L GL RVR  T +D H F   +Q+  E  KI  LI+ +YKDF     
Sbjct: 357 ELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQVQTEFAKILKLIMDVYKDFDITDY 416

Query: 424 MVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
             +LS R     +K   +D +W+ ++ ++KG +D +     D +      GE AFYGPK 
Sbjct: 417 YFRLSYRDPKNTDKYFANDEMWERSQKMLKGAMDDL---GLDYVEAE---GEAAFYGPKL 470

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +   K A+G D    TIQ+DF LP RF   YV    E+  PVMIHR + G++ERFI  + 
Sbjct: 471 DIQTKTALGNDETMSTIQLDFMLPERFGLTYVGQDGEEHRPVMIHRGIVGTMERFIAYLT 530

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           E +KG  P WL+P+Q  +  +   A  EYA+++   L       E D RNE + YKIRE 
Sbjct: 531 EIYKGAFPTWLAPVQVEIIPVNLDAHGEYAEKVRQELAKRGFRAEVDTRNEKMGYKIRES 590

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
             +K+P  ++ GD E     + +R +G+     +SL D I
Sbjct: 591 QTQKVPYTLVLGDDEMKANGVNVRPYGTDQENSMSLDDFI 630


>gi|159109673|ref|XP_001705100.1| Threonyl-tRNA synthetase [Giardia lamblia ATCC 50803]
 gi|157433179|gb|EDO77426.1| Threonyl-tRNA synthetase [Giardia lamblia ATCC 50803]
          Length = 695

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 236/643 (36%), Positives = 363/643 (56%), Gaps = 46/643 (7%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESI--SRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +T PDG     P   T  DVA+ +  ++ +  K +A   + +V D+S  + +   +E +T
Sbjct: 31  VTLPDGKTTEIPASFTALDVAKQVVKNKKVYSKFLAAVRDDEVIDMSARLGKTCKLEFLT 90

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD--FDKEQPFSSDELAQ 121
            +DPR+  V  HS AH++  A++  + +  +  GP I+ GF+YD  F+       + L Q
Sbjct: 91  FDDPRAREVFWHSSAHLLGYALEKTF-QAHLGHGPAIDSGFFYDAFFENSLKMEPESLLQ 149

Query: 122 IEKKMQEIIAR------DSP---FLKQYLSHEKARELFESKKEAYKVEILESIPAKENVT 172
           ++K   EI+ +      DSP   F +  ++ ++A +LF   K   ++ I + +   E  +
Sbjct: 150 LDKAAAEIVKQAAAAPGDSPVRRFTRLEVTKQEALDLFSYSKLKSEL-ISDHVQDGEMCS 208

Query: 173 LYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELT 232
           +Y+ G++ D CRGPH+   G ++ F K M  + AY++GD NR  + R+Y  A+ ++ +L 
Sbjct: 209 VYQCGDFVDFCRGPHIPDLGLIQAF-KCMYSSAAYFKGDQNRESMQRVYAVAFPSKDQLD 267

Query: 233 QYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DY 291
           +++  LEE+++RDHR LA+EMDLF   +   G   +   G +I++ L +++R  + + DY
Sbjct: 268 KHIELLEEAKRRDHRNLAKEMDLFMTHKYAPGAPMFMNNGTRIYRKLEAFIRELLHEFDY 327

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           EE+ TP  L+  LW  SGH   Y+ NMF ++  + T      + LKPMNCP H  ++ + 
Sbjct: 328 EEVMTPTFLNTDLWGISGHLQHYKENMFLLERKEKTDPQ---YGLKPMNCPCHCLLYKNQ 384

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI 411
             S +ELP+R+AEFG V+RNE SG+L GL RV  F QDDAH+FCT +Q+  E   +   I
Sbjct: 385 HHSVQELPIRMAEFGVVHRNELSGALSGLTRVVRFEQDDAHIFCTVDQIEQEMTGLIEFI 444

Query: 412 ISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL-- 469
             +Y  FG +   + LS RPEK++GSD LWD AE  ++ VL           NTG+    
Sbjct: 445 KRVYTPFGID-FALSLSLRPEKKMGSDELWDRAEGTLRKVL----------TNTGLDFKE 493

Query: 470 --GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPS--RFNAFYVNSHSEKC------H 519
             G+GAFYGPK +  L DA+GR  QCGTIQ+DFNLPS  RF+  Y + + EK       H
Sbjct: 494 NPGDGAFYGPKIDVHLTDALGRQHQCGTIQLDFNLPSKDRFDLLY-SVYDEKTGSVKQEH 552

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTI-TSSAVEYAQEIANLLKSH 578
           PVMIHRA+ GS+ERF+ I+IEN  G  P W+SP Q +V  +     V YA+ +     S 
Sbjct: 553 PVMIHRAILGSVERFMAILIENTGGRFPFWISPRQIVVIPLHGEDIVAYAKTVRERYHSK 612

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
              ++ D  +E +  KI     KK   I++ G +E    S+ +
Sbjct: 613 GYFVDLDISSEKMEKKIAVAWNKKYNFIMVVGAQEKGTCSVAL 655


>gi|189091896|ref|XP_001929781.1| hypothetical protein [Podospora anserina S mat+]
 gi|27803058|emb|CAD60761.1| unnamed protein product [Podospora anserina]
 gi|188219301|emb|CAP49281.1| unnamed protein product [Podospora anserina S mat+]
          Length = 783

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 237/678 (34%), Positives = 355/678 (52%), Gaps = 62/678 (9%)

Query: 4   DIKLTFPDGSIK-NFPVHATGSDVAESISRSLAKKAVAVAINGKVC-DLSDPVREG-SIE 60
           DI +T PDG+IK       T +++A+ IS SL K+ V   I+G+   DL  P+ +   +E
Sbjct: 75  DITITMPDGTIKVGKSYETTPAEIAKGISNSLFKRTVVARIDGETLWDLERPLEKSCKLE 134

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD--FDKEQPFSSDE 118
           ++   D +   V  HS AHI+ EA +  +    + IGP +++GFYY+          S +
Sbjct: 135 LLDFNDDQGKFVFWHSSAHILGEACERRFG-CSLCIGPPVDNGFYYEMALPDGAAVQSTD 193

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQG 177
            A +E  + +++    PF +  +S E   ++F   K  YK  I+ + I      T+YR G
Sbjct: 194 WAPLENIVSKVVKEKQPFQRLEMSKEDLLKMFAYNK--YKQHIIKDKIEDGTKTTVYRNG 251

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
              DLCRGPHV  TG+++ F  +MK + +Y+ GD+N   L RIYG ++  ++++  +  F
Sbjct: 252 PLIDLCRGPHVPDTGRIEAF-AIMKNSSSYFLGDANNDSLQRIYGVSFPDKKQMAAHKKF 310

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINT 296
           LEE+ KRDHR + ++ +LF+  E   G   W   G +I   ++ Y++ +     Y+E+ T
Sbjct: 311 LEEAAKRDHRLIGKQQELFYFEECSPGSAMWLPHGMRIHNAIMDYIKEEYWARGYDEVMT 370

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P + +  LW+QSGH   Y+ +MF +        D   F LKPMNCP H  +F H  +S++
Sbjct: 371 PNMFNVSLWEQSGHLAHYKEDMFLLDV------DKEQFGLKPMNCPAHAMMFRHRERSHK 424

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ELP+RLA+FG ++RNE SG+L GL RVR F QDDAH+FC ++Q+  E   + + +   Y 
Sbjct: 425 ELPLRLADFGVLHRNEASGALSGLTRVRRFQQDDAHIFCREDQIKEEVADLFDFMRKFYG 484

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD-RINTGVLLGEGAFY 475
             G     +KLSTRPEK +G    WD AE+ +K  LD    S +D  ++  +  G+GAFY
Sbjct: 485 ILGL-TFKLKLSTRPEKFLGEIETWDRAESRLKEALDEFAASDKDGGVSWELNPGDGAFY 543

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH--------------------- 514
           GPK +  + D + R WQC TIQ+DF  P  F+  Y                         
Sbjct: 544 GPKIDIAVLDCLNRPWQCATIQLDFQQPQNFSLEYQTGEAVHKGETKAAVEEPAPPAPEA 603

Query: 515 ---------------------SEKC-HPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
                                S  C  PVMIHRA+ GSIERF  I+ E+F G  P W+SP
Sbjct: 604 EAEKDKDGKEKKKPLLIKKALSPGCARPVMIHRAMAGSIERFTAILAEHFAGKWPFWMSP 663

Query: 553 IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
            Q IV  +    ++YA+E+A LLK      + D    T+  KIR   + +   + + GD 
Sbjct: 664 RQVIVIPVGMGFLDYAKEVAALLKKEKFYADVDSSGNTLQKKIRNGQLAQYNFVFVVGDD 723

Query: 613 EASERSIGIRRFGSTTTQ 630
           E   R + IR    T+TQ
Sbjct: 724 EMRNRKVNIRYRDDTSTQ 741


>gi|73981327|ref|XP_860843.1| PREDICTED: similar to threonyl-tRNA synthetase-like 1 isoform 6
           [Canis familiaris]
          Length = 701

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 222/624 (35%), Positives = 346/624 (55%), Gaps = 23/624 (3%)

Query: 5   IKLTFPDGS-IKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEII 62
           IK+T P G  +     + T   +A+ +S ++A   VA  +NG++ DL  P+   S ++ +
Sbjct: 61  IKITLPGGQKVDAVAWNTTPYQLAQQMSSTVADTVVAAQVNGELYDLERPLETDSDLKFL 120

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF--DKEQPFSSDELA 120
           T       AV  HS  H++  A + +   V +  GP  E GFY+DF   KE+     EL 
Sbjct: 121 TFSSAEGKAVFWHSSTHVLGAAAEQLLGAV-LCRGPSTECGFYHDFFLGKERTVRGSELP 179

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            +E+  QE++A   PF +  +S ++ R+LF  K   +K+ ++E        T+Y  G   
Sbjct: 180 ALEQICQELVAAAHPFRRLEVSQDQLRQLF--KDNPFKLRLIEEKVTGPTATVYGCGMLV 237

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+R TGQ+    KL+  + + WR       L R+ G ++ T +EL  +  +  E
Sbjct: 238 DLCRGPHLRHTGQIGGL-KLLTNSSSLWRSSGTPETLQRVSGISFPTVEELRAWEEWKGE 296

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQV 299
           +E RDHR++ +  +LF   E   G  F+  +G +++  L++++R +  +  + E+ TP +
Sbjct: 297 AELRDHRRIGKAQELFFFHELSPGSCFFLPRGTRVYNALVAFIRAEYTRRGFSEVKTPTL 356

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               LW+ SGHW+ Y+ +MF +  + DT+      ALKPMNCP H  +F H  +S+RELP
Sbjct: 357 FSAKLWELSGHWEHYQEDMFVLHHSTDTL------ALKPMNCPAHCLMFAHRPRSWRELP 410

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +RLA+FG ++R E SGSL GL R+R F QDDAH+FC  +Q+  E     + + S+Y   G
Sbjct: 411 LRLADFGVLHRAEASGSLGGLTRLRCFQQDDAHIFCAPDQLEEEIQGCLDFLRSVYAVLG 470

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F    + LSTRP   +G   LWD AE +++  L+        +       G+GAFYGPK 
Sbjct: 471 F-SFRLALSTRPSGFLGESCLWDQAEQVLQRALEEFGEPWDLKP------GDGAFYGPKI 523

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +  L DA+GR  QCGTIQ+DF LP RF+  Y         PV+IHRAV GS+ER +G++ 
Sbjct: 524 DVHLHDALGRPHQCGTIQLDFQLPLRFDLQYKGQAGVLERPVLIHRAVLGSVERMLGVLA 583

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREH 598
           E++ G  PLWLSP Q +V  + +   EYA+E    L++  L  + D  +  T++ ++R  
Sbjct: 584 ESYGGKWPLWLSPFQVVVIPVGAEQEEYAREAQQRLQAAGLVCDLDADSGLTLSRRVRRA 643

Query: 599 SIKKIPIIIICGDKEASERSIGIR 622
            +       + G KE S++++ IR
Sbjct: 644 QLAHYNFQFVVGQKEQSKKTVNIR 667


>gi|47220916|emb|CAG03123.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 822

 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 236/670 (35%), Positives = 359/670 (53%), Gaps = 69/670 (10%)

Query: 5   IKLTFPDGS-IKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
           I +  P G  +K      T   +A  +SRSLA++AV   + G++ DL  P+ ++ S+E +
Sbjct: 136 ISVELPGGRRLKGRAWITTPYQLACQVSRSLAQEAVVCRVGGQLWDLDRPLEQDCSLEFL 195

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD--FDKEQPFSSDELA 120
             +   + AV  HS AH++ EA++  +    +  GP +E+GFYYD   D ++  SS EL 
Sbjct: 196 CFDHEDAQAVYWHSSAHVLGEAMERFYGGC-LCYGPPVENGFYYDMFLDGQRGVSSTELG 254

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            +E   + ++    PF +  +S E   E+F+  +  +K  IL+   +    T+YR G   
Sbjct: 255 DLEALCRTVMKEKQPFERLEVSKEALLEMFQYNQ--FKCRILKEKVSGATTTVYRCGPLI 312

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHVR TG++K   KL K + AYW G S+   L R+YG ++   + L ++  F EE
Sbjct: 313 DLCRGPHVRHTGRIKAL-KLYKSSSAYWEGRSDMETLQRVYGISFPDSKMLKEWERFQEE 371

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFW-------HRKGWKIFQTLIS------------ 281
           ++KRDHRK+ ++ +LF   +   G  F            W+    L+S            
Sbjct: 372 AKKRDHRKIGKDQELFFFHDLSPGSCFLPCPEERTSTTPWRSSSGLVSLTHIVCTMAAWP 431

Query: 282 ---------------------------YMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSY 314
                                      +     +  ++E+ TP + ++ LW+ SGHW  Y
Sbjct: 432 TPACPSSGSLGPEVWPAGCGVADGVWLFQEEYWRRGFQEVATPNIYNRKLWETSGHWQHY 491

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
             NMF+    +D       FALKPMNCPGH  VF+   +S+RELP+RLA+FG ++RNE S
Sbjct: 492 GHNMFSFPVEEDV------FALKPMNCPGHCLVFSQRPRSWRELPLRLADFGVLHRNELS 545

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
           G+L GL RVR F QDDAH+FCT EQ+ +E     + +  +YK FGF    + LSTRPEK 
Sbjct: 546 GTLTGLTRVRRFQQDDAHIFCTVEQIESEMKGCLDFLRCVYKVFGF-SFQLHLSTRPEKF 604

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           +G  A+W+ AE  ++  L+        ++N     G+GAFYGPK +  ++DAIGR  QC 
Sbjct: 605 LGDIAVWNQAEKQLESSLNQFGEPW--KLNP----GDGAFYGPKIDIKIQDAIGRYHQCA 658

Query: 495 TIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI 553
           T+Q+DF LP RFN  +V     ++  PV+IHRAV GS+ER + I+ EN+ G  PLWLSP 
Sbjct: 659 TVQLDFQLPLRFNLTFVGKDGDDRGQPVIIHRAVLGSVERMVAILTENYAGKWPLWLSPR 718

Query: 554 QAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET-INYKIREHSIKKIPIIIICGDK 612
           Q +V  +  +  +YA+++        L  + D  +   +N KIR   + +   I++ G+K
Sbjct: 719 QVMVVPVNPACEDYARKVCKQFTEAGLMADVDLDSGCLLNRKIRNAQLAQYNFILVVGEK 778

Query: 613 EASERSIGIR 622
           E    S+ +R
Sbjct: 779 EKMTNSVNVR 788


>gi|225550529|ref|ZP_03771478.1| threonine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
 gi|225379683|gb|EEH02045.1| threonine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
          Length = 580

 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 217/590 (36%), Positives = 353/590 (59%), Gaps = 30/590 (5%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSD---ELAQI 122
           DP+    + HS AH++A A+   +P + +AIGP I++GFYYDF+   P +S    +L +I
Sbjct: 5   DPK----LNHSAAHVLAMALTKFYPNLSLAIGPAIDEGFYYDFNLNDPNTSITPIDLLKI 60

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M++I A+   F  + +S+E+A++LF++ K  YK++I+E    K ++++Y  G+WFDL
Sbjct: 61  EKEMKKIAAQALTFDYEQVSYEQAKDLFKNNK--YKLDIIEENKNK-SLSIYHSGKWFDL 117

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C+GPHV +T ++K   KL+ +AG+YWRGD+N   L RIYG A+N Q +L  YL  L+E +
Sbjct: 118 CKGPHVENTKEIKAI-KLLNIAGSYWRGDANNDQLIRIYGVAFNDQAQLDAYLVDLQERK 176

Query: 243 KRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           +RDHRK+ ++++LF      G G+  W   G  I   +  ++   + + +++ + TP + 
Sbjct: 177 ERDHRKIGKDLNLFTFNNLAGQGLPIWLPNGTIIKSQVQKFINEVEFQFNFDTVITPILG 236

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
              L++ SGHWD Y+ N+F+    D+ +       L+PM CP H  V+++ L+SYR LP+
Sbjct: 237 SIDLYKTSGHWDHYKDNIFSPVQIDNEV-----LILRPMTCPHHTLVYSNELRSYRSLPI 291

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RL+E   ++R E SG L G  RVR    +D HVFC  +Q+ +E +    +I    +  G 
Sbjct: 292 RLSEHSILHRYESSGGLTGFERVREMILEDCHVFCRPDQIEHEVINAFKMIQEAQEGLGI 351

Query: 421 EKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           +   + LS       EK      +W+ ++N ++ +L         +I    ++GE AFYG
Sbjct: 352 KTFEIHLSLNDPNDKEKYYDDPQMWEHSQNALRKML------KDHKIPYKEMVGEAAFYG 405

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK ++ +K  + R     TIQ+DF LP+RFN  Y+N ++E+  PVMIH  + G+ ER + 
Sbjct: 406 PKIDFQVKTVLNRIITVSTIQLDFLLPNRFNLSYINENNEQSTPVMIHIGIIGTYERLLA 465

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKI 595
           I++E  KG LPLWLSP+Q ++  +  +   +YA+E+   L+ H +    D RNE ++ KI
Sbjct: 466 ILLEQTKGVLPLWLSPVQVVIIPVNENLHADYAKELNAKLRKHLVRSSLDLRNERLSKKI 525

Query: 596 REHSIKKIPIIIICGDKE-ASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           RE  I+KIP  I+ GD+E  +++ +  RR+GS  T  VS+ D I +L  +
Sbjct: 526 REAQIQKIPYQIVVGDEEIKNDKMVTYRRYGSEETTTVSVDDFIKVLEND 575


>gi|255710799|ref|XP_002551683.1| KLTH0A05192p [Lachancea thermotolerans]
 gi|238933060|emb|CAR21241.1| KLTH0A05192p [Lachancea thermotolerans]
          Length = 740

 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 235/641 (36%), Positives = 347/641 (54%), Gaps = 40/641 (6%)

Query: 5   IKLTFPDGSIKNFPV-HATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV--REGS--- 58
           IK+   DGS K       T  D+A+ I++S   K      NG++ DL  P+  +EG    
Sbjct: 80  IKVVLKDGSEKEATAWETTPMDIAKQIAKSFPDKQCISKANGQLWDLERPLEGKEGDEVK 139

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD--------- 109
           +E    +      V  HS AH++ EA +       + +GP  EDGF+Y+F          
Sbjct: 140 LEFFDFDSDEGKRVFWHSSAHVLGEACECNLG-AHICLGPPTEDGFFYEFAVKNAPNAPA 198

Query: 110 --KEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFE-SKKEAYKVEILESIP 166
              E+  S ++   +E   + +I     F +  +S E   ++F  SK + Y V     +P
Sbjct: 199 DAPERTVSQNDFPALESVSKNVIKEKQKFERLVMSKEDLLKMFHYSKFKTYLVST--KVP 256

Query: 167 AKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWN 226
              + T+YR G+  DLC GPH+  TG++K F KL+K +  Y+ GDSN   L RIYG ++ 
Sbjct: 257 DGGSTTVYRCGKLIDLCVGPHIPHTGRIKAF-KLLKNSSCYFLGDSNNDSLQRIYGISFP 315

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
            ++ +  +L FL E+  RDHRK+ RE +LF+  E   G  FW   G +I+  L+  MR +
Sbjct: 316 DKKLMDAHLKFLAEASMRDHRKIGREQELFYFNEMSPGSCFWLPHGTRIYNNLVDLMRAE 375

Query: 287 I-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
             K  ++E+ TP + +  LW+ SGHW +Y+ NMF  +   +T      F LKPMNCPGH 
Sbjct: 376 YRKRGFDEVITPNMYNSKLWETSGHWGNYKENMFTFEVEKET------FGLKPMNCPGHC 429

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +F    +SY+ELP R+A+FG ++RNE SG+L GL RVR F QDDAH+FC + Q+  E  
Sbjct: 430 ILFKSRERSYKELPWRVADFGVIHRNEFSGALTGLTRVRRFQQDDAHIFCAQNQIEQEIE 489

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
              + +  +Y  FGFE   ++LSTRPEK VG    W++AE  ++  L           N 
Sbjct: 490 NCFSFLQYVYGVFGFE-FKMELSTRPEKFVGEIETWNNAEAKLESALRKWGG------NW 542

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH----PV 521
            +  G+GAFYGPK +  + DA+ R  QC TIQ+DF LP+RF   + +  +++      PV
Sbjct: 543 ELNPGDGAFYGPKIDIKISDALRRWHQCATIQLDFQLPNRFELEFKSKDNQENENYERPV 602

Query: 522 MIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLS 581
           MIHRA+ GS+ER   I+ E+F G  P WLSP Q +V  +     EYAQE+ + L      
Sbjct: 603 MIHRAILGSVERMTAILTEHFAGKWPFWLSPRQVLVVPVGVKYQEYAQEVRDKLCEQDFY 662

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
            + D    T+  K+R   + K   I I G++E +E+S+ IR
Sbjct: 663 ADVDLTGNTLQKKVRNGQMLKYNFIFIVGEQEMTEKSVNIR 703


>gi|66806197|ref|XP_636821.1| threonyl-tRNA synthetase [Dictyostelium discoideum AX4]
 gi|74852684|sp|Q54J66|SYTC1_DICDI RecName: Full=Probable threonyl-tRNA synthetase 1, cytoplasmic;
           AltName: Full=Threonine--tRNA ligase; Short=ThrRS
 gi|60465220|gb|EAL63315.1| threonyl-tRNA synthetase [Dictyostelium discoideum AX4]
          Length = 710

 Score =  407 bits (1047), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 230/644 (35%), Positives = 362/644 (56%), Gaps = 30/644 (4%)

Query: 5   IKLTFPDG----SIKNFPVHATGSDVAESISRSLAKKAVAVAING-KVCDLSDPVR-EGS 58
           I +T PDG     IKN     T  D+A+ ISR LA   V+  +NG ++ D+S P+  + +
Sbjct: 76  INVTLPDGKVVAGIKN---KTTPYDIAKGISRGLADSIVSSKVNGEQIWDISRPLEADCN 132

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSD 117
           +++   +         HS AHI+ +A++ I+   Q+ IGP   +GFYYD    ++  S++
Sbjct: 133 LQLCKFDSEEGKKTFWHSSAHILGQAMERIYGG-QLCIGPATSEGFYYDMAMGDKIVSAE 191

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +   I +  Q+I+    PF +  +  + A  +F+  K  YK EI+  IP ++ V+LYR G
Sbjct: 192 DYKLINEVAQKIVQEKQPFERLAVPRDIALTMFKFNK--YKTEIISKIPQEDTVSLYRCG 249

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
              DLCRGPHV +T  +K F  + K + AYW G +    L R+YG ++  ++++ +Y  F
Sbjct: 250 TLVDLCRGPHVPNTSYIKSF-AVTKNSSAYWLGKAENDDLQRVYGISFPDKKQMEEYENF 308

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINT 296
           + E+  RDHR + +  +LF       G  F+   G +I+  L+ ++R +  +  + E+ +
Sbjct: 309 MREAALRDHRNVGKAQELFFFHPYSPGSAFFLPHGTRIYNKLVEFIREEYHRRGFTEVIS 368

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +  Q LW+QSGHW  Y  NMF +    D       F+LKPMNCPGH  +F    +SYR
Sbjct: 369 PSIFSQKLWEQSGHWQKYSENMFVLPVDKDN------FSLKPMNCPGHCLMFGSRQRSYR 422

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ELP+R A+FG ++RNE +G+L GL RVR F QDDAH+FCT E + +E       +  +Y 
Sbjct: 423 ELPLRFADFGVLHRNELAGALTGLTRVRKFQQDDAHIFCTTEMIEDEINSCLGFMQYVYG 482

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
            FGFE   ++LSTRP+  +G  A WD AE  ++  L+  K     ++N      +GAFYG
Sbjct: 483 IFGFE-FGLELSTRPDNFLGEIAQWDIAEASLEKALN--KFGKPWKLNP----KDGAFYG 535

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE--KCHPVMIHRAVFGSIERF 534
           PK +  + D + R  QC TIQ+DF LP RF+  Y +  +   K  PV+IHRA+ GS+ER 
Sbjct: 536 PKIDIHITDCLKRSHQCATIQLDFQLPIRFDLEYQSDDAAELKKRPVIIHRAILGSVERM 595

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
           + I+IE+  G  PLW+SP QAIV T+  +  EY Q++   +       + D  ++TI+ K
Sbjct: 596 MAILIEHTGGKWPLWVSPRQAIVVTVNKTHNEYGQKVCKEISDAGFYCDIDDSDKTISKK 655

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           +RE  + +   I++ G +E +  ++ +R   +     +++ D I
Sbjct: 656 VREAQLAQYNYILVVGQEEINGNTVNVRTRDNVVRGSLTVNDLI 699


>gi|170575688|ref|XP_001893343.1| threonyl-tRNA synthetase, cytoplasmic [Brugia malayi]
 gi|158600735|gb|EDP37841.1| threonyl-tRNA synthetase, cytoplasmic, putative [Brugia malayi]
          Length = 685

 Score =  407 bits (1047), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 231/641 (36%), Positives = 356/641 (55%), Gaps = 36/641 (5%)

Query: 5   IKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           IK+T PDG  ++      T   +AE ISR  A  AV   +NG+V DL  P   + +++I+
Sbjct: 54  IKITLPDGKELEGESWRTTPLMIAEQISRGFADSAVVAKVNGEVWDLDRPFECDATLQIL 113

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQ 121
             +D      +   C                +  GP I +GFYYD  KE    + D+  +
Sbjct: 114 KFDDDEGKQAMERYCGG-------------HLCYGPPISEGFYYDMWKEGSTITPDDFPK 160

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +E+ ++ ++    PF +  +S E   E+F+  K  +KV I+         T+YR G   D
Sbjct: 161 LEQIVKCVVKDKQPFERLVVSKEDLLEMFKYNK--FKVRIINEKITTPFTTVYRCGPLID 218

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHVR TG+VK    ++K + +YW G S+   L RIYG ++   ++L ++    EE+
Sbjct: 219 LCRGPHVRHTGKVKAL-TVVKTSSSYWEGRSDAESLIRIYGISFPDSKQLKEWQKLQEEA 277

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVL 300
            KRDHRK+ R+ +L+       G  FW+ KG  I+ TL +++R++  K  + E+ +P + 
Sbjct: 278 AKRDHRKIGRDQELYFFHPLSPGSAFWYPKGAHIYNTLCNFIRKEYRKRGFTEVISPNMY 337

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  LW+QSGHW+ Y  NMF +    +T      F LKPMNCPGH  +++H  +++ ELP+
Sbjct: 338 NSKLWEQSGHWEHYSDNMFKIDIEKET------FGLKPMNCPGHCLMYSHMPRTHNELPL 391

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD-FG 419
           R A+FG ++RNE SG+L GL RVR F QDDAH+FC ++Q+  E +   + +   Y D FG
Sbjct: 392 RYADFGVLHRNEMSGALTGLTRVRRFQQDDAHIFCRQDQVVEEIMGCIDFLKYAYLDVFG 451

Query: 420 FEKIMVKLSTRPE-KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           F    + LSTRPE   +G    W+ AE+ ++  L+   +  +  +N G    +GAFYGPK
Sbjct: 452 F-TFKLNLSTRPEVGYLGDIETWNAAEDKLREALNA--SGHKWELNPG----DGAFYGPK 504

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +  ++DA+ R  QC TIQ+DF LP RF+  Y + ++E+  PVMIHRA+ GSIER   I+
Sbjct: 505 IDITIQDALRRLHQCATIQLDFQLPVRFDLSYFDENNERQRPVMIHRALLGSIERMTAIL 564

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF-RNETINYKIRE 597
            EN+ G  P WLSP QA V T+  S  +Y +++   +      +E D   ++T+N +IR 
Sbjct: 565 AENYGGKWPFWLSPRQAKVITVHESQNDYGRKVQQEIYEAGFEVEFDVDSSDTLNKQIRN 624

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
             I +   I++ G  EA   ++ +R   +    +V L D I
Sbjct: 625 AQIAQFNFILVVGPAEARNGTVNVRTRDNAVRGEVKLEDLI 665


>gi|185179115|ref|ZP_02964840.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str.
           ATCC 27817]
 gi|188024051|ref|ZP_02996803.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str.
           ATCC 27819]
 gi|188518364|ref|ZP_03003871.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str.
           ATCC 33695]
 gi|225551314|ref|ZP_03772260.1| threonine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
 gi|184209012|gb|EDU06055.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str.
           ATCC 27817]
 gi|188019085|gb|EDU57125.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str.
           ATCC 27819]
 gi|188998237|gb|EDU67334.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str.
           ATCC 33695]
 gi|225379129|gb|EEH01494.1| threonine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
          Length = 580

 Score =  407 bits (1047), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 217/590 (36%), Positives = 352/590 (59%), Gaps = 30/590 (5%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSD---ELAQI 122
           DP+    + HS AH++A A+   +P + +AIGP I++GFYYDF+   P +S    +L +I
Sbjct: 5   DPK----LNHSAAHVLAMALTKFYPNLSLAIGPAIDEGFYYDFNLNDPNTSITPIDLLKI 60

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M++I A+   F  + +S+E+A++LF++ K  YK++I+E    K  +++Y  G+WFDL
Sbjct: 61  EKEMKKIAAQALTFDYEQVSYEQAKDLFKNNK--YKLDIIEENKNKP-LSIYHSGKWFDL 117

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C+GPHV +T ++K   KL+ +AG+YWRGD+N   L RIYG A+N Q +L  YL  L+E +
Sbjct: 118 CKGPHVENTKEIKAI-KLLNIAGSYWRGDANNDQLIRIYGVAFNDQAQLDAYLVDLQERK 176

Query: 243 KRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           +RDHRK+ ++++LF      G G+  W   G  I   +  ++   + + +++ + TP + 
Sbjct: 177 ERDHRKIGKDLNLFTFNNLAGQGLPIWLPNGTIIKSQVQKFINEVEFQFNFDTVITPILG 236

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
              L++ SGHWD Y+ N+F+    D+ +       L+PM CP H  V+++ L+SYR LP+
Sbjct: 237 SIDLYKTSGHWDHYKDNIFSPVQIDNEV-----LILRPMTCPHHTLVYSNELRSYRSLPI 291

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RL+E   ++R E SG L G  RVR    +D HVFC  +Q+ +E +    +I    +  G 
Sbjct: 292 RLSEHSILHRYESSGGLTGFERVREMILEDCHVFCRPDQIEHEVINAFKMIQEAQEGLGI 351

Query: 421 EKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           +   + LS       EK      +W+ ++N ++ +L         +I    ++GE AFYG
Sbjct: 352 KTFEIHLSLNDPNDKEKYYDDPQMWEHSQNTLRKML------KDHKIPYKEMVGEAAFYG 405

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK ++ +K  + R     TIQ+DF LP+RFN  Y+N ++E+  PVMIH  + G+ ER + 
Sbjct: 406 PKIDFQVKTVLNRIITVSTIQLDFLLPNRFNLSYINENNEQSTPVMIHIGIIGTYERLLA 465

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKI 595
           I++E  KG LPLWLSP+Q ++  +  +   +YA+E+   L+ H +    D RNE ++ KI
Sbjct: 466 ILLEQTKGVLPLWLSPVQVVIIPVNENLHADYAKELNAKLRKHLVRSSLDLRNERLSKKI 525

Query: 596 REHSIKKIPIIIICGDKE-ASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           RE  I+KIP  I+ GD+E  +++ +  RR+GS  T  VS+ D I +L  +
Sbjct: 526 REAQIQKIPYQIVVGDEEIKNDKMVTYRRYGSEETTTVSVDDFIKVLEND 575


>gi|171920625|ref|ZP_02695822.2| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str.
           ATCC 33698]
 gi|188524282|ref|ZP_03004325.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str.
           ATCC 33696]
 gi|195867906|ref|ZP_03079904.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str.
           ATCC 33175]
 gi|198273446|ref|ZP_03205982.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str.
           ATCC 27816]
 gi|209554092|ref|YP_002284982.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str.
           ATCC 33699]
 gi|238065120|sp|B5ZC42|SYT_UREU1 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|171903344|gb|EDT49633.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str.
           ATCC 33698]
 gi|195660016|gb|EDX53396.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str.
           ATCC 33696]
 gi|195660383|gb|EDX53642.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str.
           ATCC 33175]
 gi|198249966|gb|EDY74746.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str.
           ATCC 27816]
 gi|209541593|gb|ACI59822.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str.
           ATCC 33699]
          Length = 580

 Score =  407 bits (1046), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 217/590 (36%), Positives = 352/590 (59%), Gaps = 30/590 (5%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSD---ELAQI 122
           DP+    + HS AH++A A+   +P + +AIGP I++GFYYDF+   P +S    +L +I
Sbjct: 5   DPK----LNHSAAHVLAMALTKFYPNLSLAIGPAIDEGFYYDFNLNDPNTSITPIDLLKI 60

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M++I A+   F  + +S+E+A++LF++ K  YK++I+E    K  +++Y  G+WFDL
Sbjct: 61  EKEMKKIAAQALTFDYEQVSYEQAKDLFKNNK--YKLDIIEENKNKP-LSIYHSGKWFDL 117

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C+GPHV +T ++K   KL+ +AG+YWRGD+N   L RIYG A+N Q +L  YL  L+E +
Sbjct: 118 CKGPHVENTKEIKAI-KLLNIAGSYWRGDANNDQLIRIYGVAFNDQAQLDAYLVDLQERK 176

Query: 243 KRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           +RDHRK+ ++++LF      G G+  W   G  I   +  ++   + + +++ + TP + 
Sbjct: 177 ERDHRKIGKDLNLFTFNNLAGQGLPIWLPNGTIIKSQVQKFINEVEFQFNFDTVITPILG 236

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
              L++ SGHWD Y+ N+F+    D+ +       L+PM CP H  V+++ L+SYR LP+
Sbjct: 237 SIDLYKTSGHWDHYKDNIFSPVQIDNEV-----LILRPMTCPHHTLVYSNELRSYRSLPI 291

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RL+E   ++R E SG L G  RVR    +D HVFC  +Q+ +E +    +I    +  G 
Sbjct: 292 RLSEHSILHRYESSGGLTGFERVREMILEDCHVFCRPDQIEHEVINAFKMIQEAQEGLGI 351

Query: 421 EKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           +   + LS       EK      +W+ ++N ++ +L         +I    ++GE AFYG
Sbjct: 352 KTFEIHLSLNDPNDKEKYYDDPQMWEHSQNALRKML------KDHKIPYKEMVGEAAFYG 405

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK ++ +K  + R     TIQ+DF LP+RFN  Y+N ++E+  PVMIH  + G+ ER + 
Sbjct: 406 PKIDFQVKTVLNRIITVSTIQLDFLLPNRFNLSYINENNEQSTPVMIHIGIIGTYERLLA 465

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKI 595
           I++E  KG LPLWLSP+Q ++  +  +   +YA+E+   L+ H +    D RNE ++ KI
Sbjct: 466 ILLEQTKGVLPLWLSPVQVVIIPVNENLHADYAKELNAKLRKHLVRSSLDLRNERLSKKI 525

Query: 596 REHSIKKIPIIIICGDKE-ASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           RE  I+KIP  I+ GD+E  +++ +  RR+GS  T  VS+ D I +L  +
Sbjct: 526 REAQIQKIPYQIVVGDEEIKNDKMVTYRRYGSEETTTVSVDDFIKVLEND 575


>gi|302855151|ref|XP_002959075.1| hypothetical protein VOLCADRAFT_70347 [Volvox carteri f.
           nagariensis]
 gi|300255572|gb|EFJ39869.1| hypothetical protein VOLCADRAFT_70347 [Volvox carteri f.
           nagariensis]
          Length = 563

 Score =  407 bits (1046), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 223/579 (38%), Positives = 327/579 (56%), Gaps = 49/579 (8%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD--KEQPFSS 116
           +E+ T ++   L  IRHSCAHIMA AVQ ++  VQV IGP  + GF+YDF    + P + 
Sbjct: 1   MELKTSDESEQLLRIRHSCAHIMAMAVQRLYKGVQVTIGPWTDRGFFYDFHWPADSPITE 60

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
            +L +I+K+M +II  D PF+++ ++ E+A     +  E YK+EIL+SI  ++ +T    
Sbjct: 61  KDLKKIKKEMAKIIRADLPFVREEVTPEEAEARIRAAGEPYKLEILQSI-LQQPLTEPFI 119

Query: 177 GEWFDLCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
             W+DLC GPHV  TG +     +L  +AGAYWRG+    ML+RIYGTAW T ++L  Y 
Sbjct: 120 TPWWDLCAGPHVNRTGDINPDAVELESIAGAYWRGNEQNEMLTRIYGTAWETPEQLKAYE 179

Query: 236 YFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEE 293
              EE+ KRDHRKL  E++LF I E+ G G+++WH KG  +   + ++ +   +   Y+ 
Sbjct: 180 QLKEEAAKRDHRKLGTELNLFSIQENSGGGLVYWHPKGALVRHLIETFWKELHLSRGYQL 239

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           + +P +    LW+ SGH + Y+ NM+     +D      ++ L+PMNCP H++V+  G  
Sbjct: 240 VYSPHIAKADLWRTSGHLEFYKENMYEQMKVED-----ESYQLRPMNCPFHISVYKDGYY 294

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYR+LP+RLAE G+VYR E SG++HGL RVRGFTQDDAH+FC   Q+ +E   + +L+  
Sbjct: 295 SYRDLPLRLAELGTVYRYERSGTMHGLFRVRGFTQDDAHIFCLPNQITSEIKGVLDLVEE 354

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
               FGF +  + LSTRPEK VG D +W  AE  +      ++       N  V  G GA
Sbjct: 355 TLGTFGFHEYEINLSTRPEKSVGDDVIWSTAEAAL------VEALGAKGWNYQVDAGGGA 408

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  ++DAIGR WQC TIQ+DFNLP R                     VF     
Sbjct: 409 FYGPKIDIKIRDAIGRKWQCSTIQLDFNLPERL--------------------VFA---- 444

Query: 534 FIGIMIENFKGNLPLWLSPI------QAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR 587
            + I +  F    P +L+        Q  + T+  +  EYA+++A  +K   + +E    
Sbjct: 445 -VAITLTPFSAETPAFLNCCVLPFVRQVRLLTVNDTVAEYARDVAAQMKRAGIRVEV-VG 502

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS 626
             ++   IR     KIP+I + G KEA   S+ +R +G 
Sbjct: 503 EASMGKLIRNAEKAKIPVICVVGVKEADGNSLSVRLYGG 541


>gi|253744023|gb|EET00284.1| Threonyl-tRNA synthetase [Giardia intestinalis ATCC 50581]
          Length = 695

 Score =  407 bits (1046), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 236/645 (36%), Positives = 362/645 (56%), Gaps = 46/645 (7%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESI--SRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
           + +T PDG     P  +T  DVA+ I  ++ +  K +A A + +V D+S  + +   +E 
Sbjct: 29  LTVTLPDGKTAEVPAASTALDVAKQIIKNKKVYSKFLAAARDDEVIDMSARLGKSCKLEF 88

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD--FDKEQPFSSDEL 119
           ++ +DPR+  V  HS AH++  A++  + +  +  GP I+ GF+YD  F+       + L
Sbjct: 89  LSFDDPRAKEVFWHSSAHLLGYALEKAF-QAHLGHGPAIDSGFFYDAFFENSLKMEPENL 147

Query: 120 AQIEKKMQEIIAR------DSP---FLKQYLSHEKARELFESKKEAYKVEILESIPAKEN 170
            Q++K   EI+ +      DSP   F +  ++ ++A +LF   K   ++ I + +   E 
Sbjct: 148 VQLDKTAAEIVKQASAAPGDSPIRRFTRLEVTKQEALDLFSYSKLKSEL-ISDHVKDGEM 206

Query: 171 VTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQE 230
            ++Y+ G++ D CRGPH+     ++ F K M  + AY++GD NR  + R+Y  A+ ++ +
Sbjct: 207 CSVYQCGDFVDFCRGPHIPDLSLIQAF-KCMYSSAAYFKGDQNRESMQRVYAVAFPSKDQ 265

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
           L +++  LEE+++RDHR LA+EMDLF   +   G   +   G +I++ L +++R  + + 
Sbjct: 266 LDKHIELLEEAKRRDHRNLAKEMDLFMTHKYAPGAPMFMNNGTRIYRKLEAFIRELLHEF 325

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
           DYEE+ TP  L+  LW  SGH   Y+ NMF ++  + T      + LKPMNCP H  ++ 
Sbjct: 326 DYEEVMTPTFLNTDLWGISGHLQHYKENMFLLERKEKTDPQ---YGLKPMNCPCHCLLYK 382

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
               S +ELP+R+AEFG V+RNE SG+L GL RV  F QDDAH+FCT +Q+  E   +  
Sbjct: 383 SHHHSVQELPIRMAEFGVVHRNELSGALSGLTRVVRFEQDDAHIFCTVDQIEQEMTGLIE 442

Query: 410 LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL 469
            I  +Y  FG     + LS RPEK++GSD LWD AE  ++ VL           NTG+  
Sbjct: 443 FIKRVYTPFGI-AFALSLSLRPEKKMGSDELWDRAEGTLRKVL----------TNTGLDF 491

Query: 470 ----GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPS--RFNAFYVNSHSEKC----- 518
               G+GAFYGPK +  L DA+GR  QCGTIQ+DFNLPS  RF+  Y + + EK      
Sbjct: 492 KENPGDGAFYGPKIDVHLTDALGRQHQCGTIQLDFNLPSKERFDLLY-SVYDEKTTSVKY 550

Query: 519 -HPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVE-YAQEIANLLK 576
            HPVMIHRA+ GS+ERF+ I+IEN  G  P W+SP Q IV  +    +  YA+ +     
Sbjct: 551 EHPVMIHRAILGSVERFMAILIENTGGRFPFWISPRQIIVIPLHGEEIATYAKTVRERYH 610

Query: 577 SHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
           S    ++ D   E +  KI     KK   I++ G +E    S+ +
Sbjct: 611 SKGYYVDIDMSPEKMEKKIAVAWSKKYNFIMVVGAQEKETGSVAL 655


>gi|320590732|gb|EFX03175.1| threonyl-tRNA synthetase [Grosmannia clavigera kw1407]
          Length = 752

 Score =  407 bits (1046), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 230/677 (33%), Positives = 365/677 (53%), Gaps = 73/677 (10%)

Query: 4   DIKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           DI +T PDG +I          D+A  IS+SLA + V   ++G + DL  P+  +  + +
Sbjct: 50  DITVTLPDGRTIPGTAWETRPYDIARGISKSLADRTVISRVDGDLWDLMRPLEADAQVSL 109

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF-----------DK 110
           +  ED  +  V  HS AHI+ EA +  +    +  GP  ++GF+YDF           + 
Sbjct: 110 LDFEDDEAKQVYWHSSAHILGEAAEKAF-GCHLCFGPPTDEGFFYDFGMPAEDGQGRPNH 168

Query: 111 EQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES-IPAKE 169
               + D+  ++   M  I+    PF +  ++     E+F+  K  YK  ++ S IP   
Sbjct: 169 HSTVTDDDHKRLSSLMDGIVRERQPFERLVMTKADLLEMFKFNK--YKQVLINSKIPDGT 226

Query: 170 NVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQ 229
           + T+YR G   DLCRGPHV  T ++K F  ++K + +Y+ GD+    L R+YG ++  ++
Sbjct: 227 STTVYRCGPLIDLCRGPHVVDTSRIKAF-AVLKHSASYFLGDAKNDSLQRVYGISFPDKK 285

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-K 288
            L+ Y+ FLEE+ K+DHR++ ++ +LF   +   G  F+   G +IF  L  ++  +  K
Sbjct: 286 LLSDYMKFLEEAAKKDHRRIGQDQELFFFHKLSPGSPFFLPHGMRIFNALKEFILSEYHK 345

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
            DY E+ +P + +  LW+ SGHW+ Y+ +MF ++       + + +ALKPMNCPGH  +F
Sbjct: 346 RDYVEVMSPNMFNADLWRTSGHWEHYQEDMFTLEV------EKQQWALKPMNCPGHCVIF 399

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
               +SYRELP+R+AEFG ++RNE SG+L GL RVR F QDD+H+FC ++Q+ +E   + 
Sbjct: 400 GSRERSYRELPLRMAEFGILHRNEASGALSGLTRVRRFIQDDSHIFCEEDQIGSEIRDLF 459

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD--TIKNSSQDRINTG 466
           + + ++Y   G  K  +KLSTRPEK +G+   WD AE  ++  L+  T ++ ++  +N  
Sbjct: 460 DFLRTVYGKLGM-KFRLKLSTRPEKYLGNLETWDKAEATLQHALEEFTKESGAEWSLNP- 517

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK--------- 517
              G+GAFYGPK +  + DA+ R  QC T+Q+DF LP +FN  Y+ + S           
Sbjct: 518 ---GDGAFYGPKIDIQIMDALRRWHQCATLQLDFQLPQQFNLSYMTAASSNSDGKAEAKT 574

Query: 518 --------------------------------CHPVMIHRAVFGSIERFIGIMIENFKGN 545
                                             PVMIHRAV GS ERFI  + E+F G 
Sbjct: 575 VETKPVEAETKDGKDDSKAVTASAAQTLAPGYSRPVMIHRAVLGSFERFIATLSEHFAGK 634

Query: 546 LPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPI 605
            P WLSP Q ++  + + A +Y +E+  +LK+    +++D    T+N KIR   + +   
Sbjct: 635 WPFWLSPRQILLVPVMADAEDYVREVQKVLKARGFYVDSDLGANTMNKKIRNGQVLQYNF 694

Query: 606 IIICGDKEASERSIGIR 622
           I + G KE  +RS+ IR
Sbjct: 695 IFVLGSKEMQDRSVSIR 711


>gi|189200603|ref|XP_001936638.1| threonyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187983737|gb|EDU49225.1| threonyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 768

 Score =  407 bits (1046), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 237/662 (35%), Positives = 355/662 (53%), Gaps = 65/662 (9%)

Query: 24  SDVAESISRSLAKKAVAVAING-----KVCDLSDPVREG-SIEIITPEDPRSLAVIRHSC 77
           +D+A +I++SL ++ V   ++       + DL  P+ +   +E++  +DP    V  HS 
Sbjct: 99  ADIARNIAKSLFERTVVARLDKGTPEETLWDLERPLEKSCKLELLPFDDPEGKKVFWHSS 158

Query: 78  AHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSD--ELAQIEKKMQEIIARDSP 135
           AHI+ EA +  +    + IGP IEDGFYY+       + D  +   +E  +  I+    P
Sbjct: 159 AHILGEASERRF-GCDLCIGPPIEDGFYYEMALPDNAAVDPADHKPLETIVSSIVKEKQP 217

Query: 136 FLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQV 194
           F +  LS +   E+F+S K  YK  I+ + I      T+YR G   DLCRGPHV  TG++
Sbjct: 218 FERLTLSKDDLLEMFKSNK--YKQHIIKDKIADGTFTTVYRNGPLIDLCRGPHVPHTGRI 275

Query: 195 KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMD 254
           K+F K+MK + +Y+ GD+    L RIYG ++  +  +  +L FLEE+ KRDHRK+ +E +
Sbjct: 276 KQF-KVMKNSASYFLGDAKNDSLQRIYGVSFPDKDAMQAHLKFLEEAAKRDHRKIGKEQE 334

Query: 255 LFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDS 313
           LF   E   G  F+   G  I+ TL +++R +     Y+E+ +P + +  LW+ SGHW  
Sbjct: 335 LFFFHEFSPGSCFFLPHGQIIYNTLQAFLREEYWNRGYQEVGSPNMYNSALWKISGHWQH 394

Query: 314 YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP 373
           Y  +MF      +       +ALKPMNCPGH  +F H  +SYRELP+R+A+FG ++RNE 
Sbjct: 395 YADDMFTFDVEKEK------WALKPMNCPGHCLIFKHRERSYRELPIRMADFGILHRNEA 448

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
           SG+L GL RVR F QDD HVFCT++Q+  E   + + + ++Y  FGF    +KLSTRPE 
Sbjct: 449 SGALTGLTRVRRFQQDDTHVFCTQDQITEEISALFDFLRAVYGKFGF-TFKMKLSTRPEG 507

Query: 434 RVGSDALWDDAENIMKGVLD--TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDW 491
            +G    WD AE  +   L+  T    S   +N     G+GAFYGPK +  + DA+ R++
Sbjct: 508 FLGDIETWDKAEAKLTEALNQFTAAGGSAWELNP----GDGAFYGPKIDITISDALKREF 563

Query: 492 QCGTIQVDFNLPSRFNAFYVNS---------------HSEK------------------- 517
           QC TIQ+DF LP++F   Y+ S               H E+                   
Sbjct: 564 QCATIQLDFQLPNQFELEYMTSEVIPVKNKDQPQEGGHIEQKKEKLEGADVTIPKKIKEP 623

Query: 518 ----CHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIAN 573
                 PVMIHRA++GS ERFI I+ E+F G  P WLSP Q +V  +   A +Y +E+  
Sbjct: 624 QPGYARPVMIHRAIYGSFERFIAILTEHFAGRWPFWLSPRQVMVIPVMPGANDYVKEVQA 683

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            L+ H L  + D    T+  KIR   +     I++ G +E   R++  R      TQ+  
Sbjct: 684 ELRKHRLHADIDISGNTMQKKIRTAQLALYNFIMVVGAEEQQARAVNWRNRDDQETQQRG 743

Query: 634 LL 635
           ++
Sbjct: 744 VI 745


>gi|312218414|emb|CBX98360.1| similar to threonyl-tRNA synthetase [Leptosphaeria maculans]
          Length = 784

 Score =  407 bits (1045), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 246/694 (35%), Positives = 362/694 (52%), Gaps = 82/694 (11%)

Query: 4   DIKLTFPDGSI-KNFPVHATGSDVAESISRSLAKKAVAVAING-----KVCDLSDPVREG 57
           DI +T  DG I +      + +++A +IS+SL ++ V   ++       + DL  P+ + 
Sbjct: 80  DISITLEDGKIIQGKSWETSPAEIARNISKSLFERTVVARLDKGTPEETLWDLERPLEKS 139

Query: 58  -SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF---DKEQP 113
             +E++  + P    V  HS AHI+ EA +  +    + IGP IEDGFYY+    D    
Sbjct: 140 CKLELLPFDHPEGKKVFWHSSAHILGEASERRYG-CDLCIGPPIEDGFYYEMALPDGAAV 198

Query: 114 FSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVT 172
             SD    +E  +  I+     F +  LS     E+F+S K  YK  I+ + IP     T
Sbjct: 199 EQSDH-KPLETIVNSIVKEKQVFQRLTLSKHDLLEMFKSNK--YKQHIIKDKIPDGTFTT 255

Query: 173 LYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELT 232
           +YR G   DLCRGPHV  TG++K+F K+MK + +Y+ GD+    L RIYG ++  +  + 
Sbjct: 256 VYRNGPLIDLCRGPHVPHTGRIKQF-KIMKNSASYFLGDAANDSLQRIYGVSFPDKDAMQ 314

Query: 233 QYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDY 291
            +L FLEE+ KRDHRK+ ++ +LF   E   G  F+   G  I+ TL +++R +     Y
Sbjct: 315 AHLKFLEEAAKRDHRKIGKDQELFFFHEFSPGSCFFLPHGQIIYNTLQAFLREEYWNRGY 374

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           +E+ +P + +  LW+ SGHW  Y  +MF      +       +ALKPMNCPGH  +F H 
Sbjct: 375 QEVGSPNMYNSALWKISGHWQHYADDMFTFDVEKEK------WALKPMNCPGHCLIFKHR 428

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI 411
            +SYRELP+R+A+FG ++RNE SG+L GL RVR F QDD HVFCT++Q+  E L + + +
Sbjct: 429 ERSYRELPIRMADFGILHRNEASGALTGLTRVRRFQQDDTHVFCTQDQINEEILALFDFL 488

Query: 412 ISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD--TIKNSSQDRINTGVLL 469
            ++Y  FGF    +KLSTRPE  +G    W+ AE  +   LD  T        +N     
Sbjct: 489 KAVYGKFGF-TFKLKLSTRPEGFLGDIDTWNQAEAKLTQALDEFTAGGGGAWELNP---- 543

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-------------- 515
           G+GAFYGPK +  + DA+ R++QC TIQ+DF LP++F   Y+ S                
Sbjct: 544 GDGAFYGPKIDITISDALKREFQCATIQLDFQLPNQFELEYMTSEGAATKPKEEKVKAEQ 603

Query: 516 -----------EKCH---------------------------PVMIHRAVFGSIERFIGI 537
                      EK H                           PVMIHRA++GS ERFI I
Sbjct: 604 QKVEKKAEQPKEKDHIDQKKDNLGGQVAIPKEIRPPQPGYARPVMIHRAIYGSFERFIAI 663

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E+F G  P WLSP Q +V  +  SA +Y +E+   L+ HHL  + D    T+  KIR 
Sbjct: 664 LTEHFAGRWPFWLSPRQVMVIPVMPSANDYVKEVQAELRKHHLHADIDISGNTMQKKIRT 723

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
             +     I++ G +E   R++  R      TQ+
Sbjct: 724 AQLSLYNFIMVVGAEEQKARAVNWRNRDDQETQQ 757


>gi|145230123|ref|XP_001389370.1| threonyl-tRNA synthetase, cytoplasmic [Aspergillus niger CBS
           513.88]
 gi|134055485|emb|CAK44000.1| unnamed protein product [Aspergillus niger]
          Length = 718

 Score =  407 bits (1045), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 227/664 (34%), Positives = 363/664 (54%), Gaps = 45/664 (6%)

Query: 4   DIKLTFPDGSIKNFPVHA-----TGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EG 57
           +IK+T   G   +  V A     T + + +++ + L+   V   +  ++ DLS P+  E 
Sbjct: 53  EIKVTIELGDGNSIDVTANAWETTPAQLLKNVPKELSANVVLARVGKELWDLSRPLEGEC 112

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF--DKEQPFS 115
           ++  +  + P    V  HS AH + EA +  +    ++ GP    GF+YD      +   
Sbjct: 113 TVSYVPFDHPEGREVFWHSSAHCLGEACECEY-GCLLSHGPPTPQGFFYDMAMPDNRVVR 171

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
             +   +++    I      F +  ++ E  +++F   K  YK+  ++ +   E  T+YR
Sbjct: 172 ETDWPSLDRHANRIFKEKQSFDRLEVTKENLKKMFAYSK--YKLHYIDKLVTGEKSTVYR 229

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
            G   DLCRGPH++STG+VK F K+M+ + AY+ GD +   L RI G A+  ++++ ++L
Sbjct: 230 CGSLVDLCRGPHIQSTGKVKTF-KIMQNSSAYFLGDQSNDSLQRIRGVAFPDKKQMQEHL 288

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEI 294
            FLEE+EKR+H KL +E +LF   E   G  F    G KIF  L S +R +  K  Y+E+
Sbjct: 289 KFLEEAEKRNHVKLGKEQELFFFDEVSPGCPFLLPNGTKIFNALQSLLRSEYRKRGYQEV 348

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
            TP + D  +W+ SGHW  Y+ +MF +        + R +ALKPMNCPGH  +F H  +S
Sbjct: 349 QTPNMYDVGIWKTSGHWAHYKDDMFKLDV------EKREWALKPMNCPGHFVLFGHRERS 402

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YRELP+R+A+FG ++RNE SG+L GL RVR F QDD H+FCT++Q+ +E   + + + +I
Sbjct: 403 YRELPLRIADFGVLHRNEASGALSGLTRVRKFQQDDTHIFCTQDQITSEIEGLFDFLQAI 462

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           Y  FGF    +KLSTRPEK +G    W+ AE  +K  +   K +     +  +  G+GAF
Sbjct: 463 YGLFGF-TFKLKLSTRPEKYLGELETWNYAEEQLKAAMTKFKGN-----DWTIDEGDGAF 516

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE------------------ 516
           YGPK +  + DA+ R++QC TIQ+D+  P  F   Y+++                     
Sbjct: 517 YGPKIDITIADALKREFQCATIQLDYQAPINFKLEYMSNEKASADAAKEGEAKPNEPGPG 576

Query: 517 KCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLK 576
           +  PV+IHRA+ GS ERF+GI+IE+F G  P W+SP Q ++  +  +  +Y +E+  +L+
Sbjct: 577 RARPVVIHRAIIGSFERFLGILIEHFGGKWPFWISPRQILIVPVMPAVNDYVEELQTILR 636

Query: 577 SHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
              L+++ D    T+  KIR   +++   I + G  E   R++ IR      TQK  ++ 
Sbjct: 637 GDKLNVDIDLSGNTMQKKIRTGQLQQYNFIFVVGASEKESRTVNIRNRDDPATQKQGVM- 695

Query: 637 AIPI 640
            IP+
Sbjct: 696 -IPL 698


>gi|289620774|emb|CBI52508.1| unnamed protein product [Sordaria macrospora]
          Length = 792

 Score =  407 bits (1045), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 234/678 (34%), Positives = 356/678 (52%), Gaps = 64/678 (9%)

Query: 4   DIKLTFPDGSIKNFPVH-ATGSDVAESISRSLAKKAVAVAINGKVC-DLSDPVREG-SIE 60
           DI +T PDGS K    +  T +++A+SIS SL K+ V   I+G+   DL  P+ +   +E
Sbjct: 78  DILITMPDGSTKAGKAYETTPAEIAKSISNSLFKRTVVARIDGETLWDLERPLEKSCKLE 137

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD--FDKEQPFSSDE 118
           ++   D +   V  HS AH++ EA +  +    + IGP +++GFYY+          S +
Sbjct: 138 LLDFNDDQGKFVFWHSSAHVLGEACERRF-GCSLCIGPPVDNGFYYEMALPGGAAVQSSD 196

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQG 177
            A +E  + +I+    PF +  +S E   ++F      YK  I+ + IP     T+YR G
Sbjct: 197 WAPLENIVTKIVKEKQPFQRLEMSKEDLLKMFAYN--PYKQHIIKDKIPDGTRTTVYRNG 254

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
              DLCRGPHV  T +++ F  +MK + +Y+ GD+N   L RIYG ++  ++++  +  F
Sbjct: 255 PLIDLCRGPHVPDTSRIEAF-AIMKNSSSYFLGDANNDSLQRIYGVSFPDKKQMAAHKKF 313

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINT 296
           LEE+ KRDHR + ++ +LF+  E   G   W   G +I   ++ Y++ +  K  Y+E+ T
Sbjct: 314 LEEAAKRDHRLIGKQQELFYFEECSPGSAMWLPHGMRINNAIMEYIKEEYWKRGYDEVMT 373

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P + +  LW+QSGH   Y+ +MF +        D   F LKPMNCP H  +F H  +S++
Sbjct: 374 PNMFNTSLWEQSGHLAHYKDDMFILDV------DKEQFGLKPMNCPAHAMMFRHRDRSHK 427

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ELP+RLA+FG ++RNE SG+L GL RVR F QDDAH+FC ++Q+  E   + + + S Y 
Sbjct: 428 ELPLRLADFGVLHRNEASGALSGLTRVRRFQQDDAHIFCREDQIKAEVADLFDFMKSFYG 487

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
             G     +KLSTRPEK +G    WD AE  +K  L+    S+          G+GAFYG
Sbjct: 488 MLGL-TFKLKLSTRPEKYMGEIETWDRAEARLKEALNEFTASTGGTWELNE--GDGAFYG 544

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK------------------- 517
           PK +  + D + R WQC TIQ+DF  P  F+  Y+ + ++                    
Sbjct: 545 PKIDIAVLDCLNRPWQCATIQLDFQQPINFSLEYMTAETQAKQDESKLAPKAPEPEAPKE 604

Query: 518 -------------------------CHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
                                      PVMIHRA+ GSIERF  I+ E+F G  P W+SP
Sbjct: 605 EEAPKEGEDKKKKPLLVKKPLAPGCARPVMIHRAMAGSIERFTAILAEHFAGKWPFWMSP 664

Query: 553 IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
            Q +V  +    ++YA+E+A  LK   + ++ D    T+  KIR   + +   I + GD 
Sbjct: 665 RQVMVIPVGMGFLDYAKEVALTLKKEKIHVDVDSSGNTLQKKIRSAQLAQYNFIFVVGDD 724

Query: 613 EASERSIGIRRFGSTTTQ 630
           E + R + IR    T+TQ
Sbjct: 725 EKTNRKVNIRYRDDTSTQ 742


>gi|114559271|ref|XP_001168925.1| PREDICTED: threonyl-tRNA synthetase-like 1 isoform 8 [Pan
           troglodytes]
          Length = 701

 Score =  407 bits (1045), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 232/627 (37%), Positives = 344/627 (54%), Gaps = 23/627 (3%)

Query: 2   PSDIKLTFPDGS-IKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
           P  IK++ P G  I     + T   +A  IS +LA  AVA  +NG+  DL  P+   S +
Sbjct: 58  PRTIKISLPGGQKIDAVAWNTTPYQLARQISSTLADTAVAAQVNGEPYDLERPLETDSDL 117

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF--DKEQPFSSD 117
             +T + P   AV  HS  H++  A +     V +  GP  E GFY+DF   KE+     
Sbjct: 118 RFLTFDSPEGKAVFWHSSTHVLGAAAEQFLGAV-LCRGPSTEYGFYHDFFLGKERTIRGS 176

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           EL  +E+  QE+ A   PF +   S ++ R+LF  K   +K+ ++E        T+Y  G
Sbjct: 177 ELPVLERICQELTAAARPFRRLEASRDQLRQLF--KDNPFKLHLIEEKVTGPTATVYGCG 234

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
              DLC+GPH+R TGQ+     L   +  +    +    L R+ G ++ T + L  +  +
Sbjct: 235 TLVDLCQGPHLRHTGQIGGLKLLSNSSSLWRSSGAPE-TLQRVSGISFPTTELLRAWEAW 293

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
            EE+E RDHR++ +E +LF   E   G  F+  +G +++  L++++R +     + E+ T
Sbjct: 294 REEAELRDHRRIGKEQELFFFHELSPGSCFFLPRGTRVYNALVAFIRAEYAHRGFSEVKT 353

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +    LW+QSGHW+ Y+ +MFAV+   DT+      ALKPMNCP H  +F H  +S+R
Sbjct: 354 PTLFSTKLWEQSGHWEHYQEDMFAVQHITDTL------ALKPMNCPAHCLMFAHRPRSWR 407

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ELP+RLA+FG+++R E SG L GL R+R F QDDAH+FCT +Q+  E     + + S+Y 
Sbjct: 408 ELPLRLADFGALHRAEASGGLGGLTRLRCFQQDDAHIFCTTDQLEAEIQSCLDFLRSVYA 467

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
             GF    + LSTRP   +G   LWD AE ++K  L          +N+G    +GAFYG
Sbjct: 468 VLGF-SFRLALSTRPSGFLGDPCLWDQAEQVLKQALKEFGEPWD--LNSG----DGAFYG 520

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK +  L DA+GR  QCGTIQ+DF LP RF+  Y         PV+IHRAV GS+ER +G
Sbjct: 521 PKIDVHLHDALGRPHQCGTIQLDFQLPLRFDLQYKGQAGALERPVLIHRAVLGSVERLLG 580

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKI 595
           ++ E+  G  PLWLSP Q +V  + S   EYA+E    L++  L  + D  +  T++ +I
Sbjct: 581 VLAESCGGKWPLWLSPFQVVVIPVGSEQEEYAKEAQQSLRAAGLVSDLDADSGLTLSRRI 640

Query: 596 REHSIKKIPIIIICGDKEASERSIGIR 622
           R   +       + G KE S+R++ IR
Sbjct: 641 RRAQLAHYNFQFVVGQKEQSKRTVNIR 667


>gi|71033673|ref|XP_766478.1| threonyl-tRNA synthetase [Theileria parva strain Muguga]
 gi|68353435|gb|EAN34195.1| threonyl-tRNA synthetase,  putative [Theileria parva]
          Length = 779

 Score =  406 bits (1044), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 223/612 (36%), Positives = 352/612 (57%), Gaps = 30/612 (4%)

Query: 49  DLSDPVREGS-IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD 107
           D+  P  +   +E +     +   V  HS AHI+  A+++ +    + IGP +  GFYYD
Sbjct: 181 DMHRPFEDSCKVEFLDFNSEQGQHVYWHSSAHILGSALETCFGGF-LTIGPALSSGFYYD 239

Query: 108 -FDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES-I 165
            +        +++  +   ++ +   +SPF +   + E+A EL   K   +KV+++++ +
Sbjct: 240 VYLGNNSVKPEDVKPLLSHVEALTNLNSPFERLVCTKEEALELM--KYNPFKVQLIKNKV 297

Query: 166 PAKENVTLYRQGEWFDLCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTA 224
           P  EN   YR G++ DLCRGPH+ +T  V+   F + K++ +YW  ++    L R+YG +
Sbjct: 298 PDGENTVCYRCGDFVDLCRGPHIPTTSMVRANSFDVTKISSSYWLSNAKSDTLQRVYGIS 357

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM 283
           +  +++L  Y + +EE+++RDHR +  ++ LF+     S G  FW   G KI+  L+ +M
Sbjct: 358 FPEKEQLKMYKHRIEEAKQRDHRTIGTDLKLFYFDTVHSPGSCFWLPNGAKIYNRLVEFM 417

Query: 284 RRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
           R   +   Y+E+ TP +    LW+QSGH+D+Y+ NM+     D        + +KPMNCP
Sbjct: 418 RDNYRIRGYQEVITPNIFSCDLWKQSGHYDNYKENMYLFNLED------TEWGMKPMNCP 471

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN 402
           GH  +F H   SY++LP+RLA+FG ++RNE +GSL GL RVR F QDDAH+FCT+EQ+  
Sbjct: 472 GHCLMFKHLFLSYKQLPLRLADFGVLHRNELTGSLSGLTRVRRFQQDDAHIFCTREQIME 531

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
           E L I   I  +Y  F F +   KLST+P K +G + LW+ AE  ++  L+  K  ++  
Sbjct: 532 EVLNILTFIGKVYSLFDF-RYEFKLSTKPAKALGDNELWEVAEKSLEEALN--KTGAKWI 588

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFY-----VNSHSEK 517
           +N     G+GAFYGPK + +L D + R+ QCGTIQ+DFNLP RFN  Y      ++ + +
Sbjct: 589 LNP----GDGAFYGPKIDVVLFDCLDREHQCGTIQLDFNLPIRFNLEYRDKSESSAENVR 644

Query: 518 C---HPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANL 574
           C    PV+IHRA+FGSIERF+ I++E  KG LP WLSP Q +   IT S ++YA E+   
Sbjct: 645 CGFNRPVIIHRAIFGSIERFVAIVLEQTKGKLPFWLSPNQLLFIPITDSHLDYALELYEK 704

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
             +   +++ D  N TIN KI+    ++   + I GD+E   R++ +R   S     VSL
Sbjct: 705 FNALGYNVDVDRSNNTINKKIKFGQQQRWNYMGIVGDREVETRTVSLRPRDSDEQNVVSL 764

Query: 635 LDAIPILTKESL 646
            + + +   + L
Sbjct: 765 DELVKLFESQQL 776


>gi|153870648|ref|ZP_02000004.1| threonyl-tRNA synthetase, class IIa [Beggiatoa sp. PS]
 gi|152072888|gb|EDN69998.1| threonyl-tRNA synthetase, class IIa [Beggiatoa sp. PS]
          Length = 390

 Score =  406 bits (1044), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 182/375 (48%), Positives = 265/375 (70%), Gaps = 13/375 (3%)

Query: 249 LAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHLWQQ 307
           + +++DLFH+ E+  G++FWH KGW+I+  + +Y+R  ++   Y+E++TPQ++D+ LW++
Sbjct: 1   MGKQLDLFHVQEEAPGMVFWHDKGWQIYIIIQNYIRHLLRQHHYQEVHTPQLVDRSLWEK 60

Query: 308 SGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGS 367
           SGHWD +  +MF  +  +      R +A+KPMNCP H+ +FN GLKSYR+LP+RLAEFGS
Sbjct: 61  SGHWDKFGDDMFVTQSEN------REYAVKPMNCPCHIQIFNQGLKSYRDLPLRLAEFGS 114

Query: 368 VYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKL 427
            +RNE SG+LHGLMR+RGF QDDAH+FCT +Q+  E     +L+  +Y DFGF+ I++KL
Sbjct: 115 CHRNEASGTLHGLMRIRGFVQDDAHIFCTDDQIQQEVSDFIDLLFKVYTDFGFKNILIKL 174

Query: 428 STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAI 487
           STRPEKRVGSD +WD AE  ++  L+  K      +   +  GEGAFYGPK E++LKD +
Sbjct: 175 STRPEKRVGSDEVWDKAEKALELALNNKK------LAWDLQPGEGAFYGPKIEFVLKDCL 228

Query: 488 GRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
            R WQCGTIQVDF++P R  A Y+ +   K  PVM+HRA+ GS+ERFIG++IE + G LP
Sbjct: 229 DRVWQCGTIQVDFSMPDRLGATYIAADGSKQVPVMLHRAILGSLERFIGVLIEEYAGALP 288

Query: 548 LWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIII 607
           LWL+P+Q ++  IT    +YA++I   L      +E+D RNE I +KIREH+++KIP ++
Sbjct: 289 LWLAPVQVVILNITDEHADYAKQIEVKLLKEGFRVESDLRNEKIGFKIREHTLQKIPYLL 348

Query: 608 ICGDKEASERSIGIR 622
           I G +E   + + +R
Sbjct: 349 IIGGREIETQQVTVR 363


>gi|269219392|ref|ZP_06163246.1| threonine--tRNA ligase [Actinomyces sp. oral taxon 848 str. F0332]
 gi|269211185|gb|EEZ77525.1| threonine--tRNA ligase [Actinomyces sp. oral taxon 848 str. F0332]
          Length = 709

 Score =  406 bits (1043), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 229/655 (34%), Positives = 353/655 (53%), Gaps = 46/655 (7%)

Query: 36  KKAVAVAINGKVCDLSDPVR---EGSI-EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE 91
           K  VA+ ++G++ DL+  +    EG++ E +       L ++RHS AH++A+AVQ ++P+
Sbjct: 28  KNVVALRVDGELKDLATDLASLPEGAVVEGVDVSSDDGLNILRHSTAHVLAQAVQQVFPD 87

Query: 92  VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFE 151
             + IGP I DGFYYDF      + + L  +EK+M+ I+     F ++ ++   A    E
Sbjct: 88  ANLGIGPFITDGFYYDFGNIDAVTPELLRDLEKRMKRIVKEGQTFRRREIADADAAA--E 145

Query: 152 SKKEAYKVEILESIPAKEN----------VTLY----RQGE--WFDLCRGPHVRSTGQVK 195
              + YK+E++ +  A             +T+Y    R G   W DLCRGPH+ ST  + 
Sbjct: 146 LAGQPYKLELVGTKGAGAEGASVEVGGAALTMYDNCSRDGSVVWTDLCRGPHLPSTRFIG 205

Query: 196 KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDL 255
             F L K + AYW+GD     L RIYGTAW T+ EL  Y   + E+E+RDHR+L  E+DL
Sbjct: 206 NGFALTKASAAYWKGDQAGDRLQRIYGTAWPTKDELAAYQKRIAEAERRDHRRLGAELDL 265

Query: 256 FHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDS 313
           F   E+ G G++ +H KG  +   + SY+ RR +++ ++ ++TP++    L+  SGH   
Sbjct: 266 FSFPEEIGPGLVVFHPKGGILRHIVESYVTRRHLEEGFDFVHTPEISKGGLFHTSGHLPY 325

Query: 314 YRANMFAVKCADD-------TIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFG 366
           Y   MF     D+         +  + + LK MNCP H  +F    +SYRELP+R  E G
Sbjct: 326 YADTMFPPMKVDEERGADGEVTRAGQDYYLKAMNCPMHNLIFRSRGRSYRELPLRFFEMG 385

Query: 367 SVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK 426
             YR E SG +HGL R+RGFTQDD+H +CT EQ   E   + N  + I +DFG     ++
Sbjct: 386 HDYRYEKSGVVHGLTRMRGFTQDDSHTYCTPEQAKGEIEMLLNFFLDILRDFGLTDFYLE 445

Query: 427 LSTRPE-----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
           LSTR E     K +GSD  W  A  I++   +    +  D +      G  AFYGPK   
Sbjct: 446 LSTRDEGKKKDKFIGSDEDWAAATRILE---EACAATGLDLVPD---PGGAAFYGPKVSV 499

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+GR WQ  T+Q DFN P RF+  Y      +  PVMIH A  GS+ERFIG++ E+
Sbjct: 500 QVKDALGRTWQMSTVQYDFNQPERFDLEYTAPDGSRRRPVMIHSAKLGSVERFIGVLTEH 559

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  P WL+P+QA +  +  +   Y +E+A  L++  + ++ D  ++    KIR  + +
Sbjct: 560 YAGAFPAWLAPVQARLVPVAEAFNPYCEEVAAKLRAAGIRVDVDLSDDRFGKKIRNAAKE 619

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP----ILTKESLPPDCQK 652
           KIP  +I G ++A   ++  R         VS+ +A+     ++ +    P C++
Sbjct: 620 KIPFTLIAGGEDAEAEAVSFRYRDGHQENGVSVDEAVAHIGRVVARRVNDPACER 674


>gi|12847728|dbj|BAB27683.1| unnamed protein product [Mus musculus]
          Length = 723

 Score =  406 bits (1043), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 230/641 (35%), Positives = 350/641 (54%), Gaps = 40/641 (6%)

Query: 5   IKLTFPDGS-IKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           IK++ P+G  +     + T   +A  IS +LA  AVA  +NG++ DL  P+  +  +  +
Sbjct: 66  IKISLPEGQKVDAVAWNTTPYQLAHQISVTLADTAVAAEVNGELYDLDRPLETDCHLRFL 125

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF--DKEQPFSSDELA 120
           T + P   AV  HS AH++  A +     V +  GP  E GFY+DF   KE+   S EL 
Sbjct: 126 TFDSPEGKAVFWHSSAHVLGAAAEQQLGAV-LCRGPSTESGFYHDFFLGKERTVRSAELP 184

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            +E+  QE+IA   PF +   S ++ R+LF  K   +K+ ++E        T+Y  G   
Sbjct: 185 ILERICQELIAAAQPFRRLEASRDQLRQLF--KDNHFKLHLIEEKVTGPTATVYGCGMSV 242

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+R TGQ+    KL+  + A WR       L R+ G ++   + L  +    E 
Sbjct: 243 DLCRGPHLRHTGQIGAL-KLLTNSSALWRSLGAPETLQRVSGISFPKVELLRNWEARREA 301

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQV 299
           +E RDHR++ +E +LF   E   G  F+  +G +++  L++++R +  +  + E+ TP +
Sbjct: 302 AELRDHRRIGKEQELFFFHELSPGSCFFLPRGTRVYNALVAFIRAEYARRGFSEVKTPTL 361

Query: 300 LDQHLWQQSGHWDSYRANMFAVK-----------------CADDTIKDLRTFALKPMNCP 342
               LW+QSGHW+ YRA+MF++K                 C  DT+      ALKPMNCP
Sbjct: 362 FSTKLWEQSGHWEHYRADMFSLKPPGTDGVDNSQSGHPARCPKDTL------ALKPMNCP 415

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN 402
            H  +F H  +S+RELPVRLA+FG+++R E SGSL GL R+  F QDDAH+FC   Q+  
Sbjct: 416 AHCLMFAHRPRSWRELPVRLADFGALHRAEASGSLGGLTRLWRFQQDDAHIFCAPHQLEA 475

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
           E     + +  +Y   GF    + LSTRP   +G   LWD AE +++  L+         
Sbjct: 476 EIQGCLDFLRCVYSVLGF-SFHLALSTRPPGFLGEPRLWDQAEQVLQQALEKFGEPWD-- 532

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
           +N G    +GAFYGPK +  L DA+GR  QCGTIQ+DF LP RF+  Y         PV+
Sbjct: 533 LNPG----DGAFYGPKIDVHLHDALGRPHQCGTIQLDFQLPLRFDLQYKGPAGTPECPVL 588

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSI 582
           IHRAV GS+ER +G++ E+  G  PLWLSP+Q +V  + +   EYA+++   L++  L  
Sbjct: 589 IHRAVLGSVERLLGVLAESCGGKWPLWLSPLQVVVIPVRTEQEEYARQVQQCLQAAGLVS 648

Query: 583 ETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           + D  +  T++ ++R   +       + G +E S+R++ +R
Sbjct: 649 DLDADSGLTLSRRVRRAQLAHYNFQFVVGQREQSQRTVNVR 689


>gi|303310925|ref|XP_003065474.1| threonyl-tRNA synthetase, cytoplasmic, putative [Coccidioides
           posadasii C735 delta SOWgp]
 gi|240105136|gb|EER23329.1| threonyl-tRNA synthetase, cytoplasmic, putative [Coccidioides
           posadasii C735 delta SOWgp]
 gi|320034634|gb|EFW16577.1| threonyl-tRNA synthetase [Coccidioides posadasii str. Silveira]
          Length = 757

 Score =  406 bits (1043), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 226/648 (34%), Positives = 348/648 (53%), Gaps = 54/648 (8%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGK-VCDLSDPV-REGSIEIITPEDPRSLAVIRHSCA 78
           +T     + I + L+   V   ++GK + DL  P+ R+  +  +  + P    V  HS A
Sbjct: 98  STPGSFLKDIPKELSSNVVIAKLDGKQLWDLDRPLERDCRVSYLPFDSPEGREVFWHSSA 157

Query: 79  HIMAEAVQSIWPEVQVAIGPIIEDGFYYD--FDKEQPFSSDELAQIEKKMQEIIARDSPF 136
           H++ EA +  +    ++ GP    GF+YD            +   ++ +   I      F
Sbjct: 158 HVLGEAAECEY-GCMLSHGPPTAQGFFYDMALPDNGVVKESDWPSLDSRSARIFKEKQSF 216

Query: 137 LKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKK 196
            +  +S E  R++F   K  YK+  + ++   E+ T+YR G   DLCRGPH+++TG++K 
Sbjct: 217 DRLEVSKENLRKMFGYSK--YKMHYINNLVEGESSTVYRCGTLVDLCRGPHIQNTGKIKA 274

Query: 197 FFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLF 256
             K+M+ + AY+ GD +   L RI G A+  ++ L ++L FLEE+EKR+H K+ +E +LF
Sbjct: 275 M-KIMQNSSAYFLGDQSNDSLQRIRGVAFPDKKSLQEHLKFLEEAEKRNHLKIGKEQELF 333

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYR 315
              E   G  F    G KIF  L   +R +  K  Y+E+ +P + D  LW+ SGHW+ Y+
Sbjct: 334 FFDEVSPGCPFLLPNGTKIFNALQKLLRTEYRKRGYQEVQSPNMYDVGLWRTSGHWNHYK 393

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            +MF +        + R +ALKPMNCPGH  +FNH  +SYRELP+R+A+FG ++RNE SG
Sbjct: 394 DDMFKLAV------EKREWALKPMNCPGHCIMFNHRERSYRELPLRMADFGVLHRNEASG 447

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
           +LHGL RVR F QDD H+FCT++Q+  E   + + + +IY  FGF    +KLSTRPEK +
Sbjct: 448 ALHGLTRVRKFQQDDTHIFCTEDQITQEIEGLFDFLRAIYGLFGF-SFKLKLSTRPEKYL 506

Query: 436 GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGT 495
           G    WD AE  +K  L   K S  +     +  G+GAFYGPK +  ++DA+ R++QC T
Sbjct: 507 GKLETWDFAEAQLKEALTRFKGSDWE-----IDEGDGAFYGPKIDITIQDALKREFQCAT 561

Query: 496 IQVDFNLPSRFNAFYVNSHSEK---------------------------------CHPVM 522
           IQ+D+ LP  F   Y+ +   K                                   PVM
Sbjct: 562 IQLDYQLPQNFKLEYMTNEIAKPKAPEPKKEESGPREGGDSKAADSDDGVPGPGRARPVM 621

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSI 582
           IHRA+ GS ERF GI+IE+F G  P WLSP Q ++  +  +  +Y +E+  +L+   L++
Sbjct: 622 IHRAIIGSFERFFGILIEHFGGKWPFWLSPRQILIVPVMPAVYDYVEELQGILRGDKLNV 681

Query: 583 ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
           + D    T+  KIR   + +   I + G +E   R++ IR     ++Q
Sbjct: 682 DIDVSGNTLQKKIRNGQLAQYNFIFVVGAQEKETRTVNIRNRDDPSSQ 729


>gi|332220153|ref|XP_003259222.1| PREDICTED: threonyl-tRNA synthetase, mitochondrial isoform 1
           [Nomascus leucogenys]
          Length = 718

 Score =  406 bits (1043), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 233/638 (36%), Positives = 351/638 (55%), Gaps = 28/638 (4%)

Query: 2   PSDIKLTFP-DGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
           P  IK++ P D  I     + T   +A  IS +LA  AVA  +NG+  DL  P+   S +
Sbjct: 58  PRTIKISLPGDQKIDAVAWNTTPYQLARQISSTLADTAVAAQVNGEPYDLERPLETDSDL 117

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF--DKEQPFSSD 117
             +T + P   AV  HS  H++  A +     V +  GP  E GFY+DF   KE+     
Sbjct: 118 RFLTFDSPEGKAVFWHSSTHVLGAAAEQFLGAV-LCRGPSTEYGFYHDFFLGKERTIRGS 176

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           EL  +E+  QE+ A   PF +   S ++ R+LF  K   +K+ ++E        T+Y  G
Sbjct: 177 ELPVLERICQELTAAAQPFRRLEASRDQLRQLF--KDNPFKLHLIEERVTGPTATVYGCG 234

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
              DLC+GPH+R TGQ+     L   +  +    +    L R+ G ++ T + L  +  +
Sbjct: 235 TLVDLCQGPHLRHTGQIGGLKLLSNSSSLWRSSGAPE-TLQRVSGISFPTTELLRAWEAW 293

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINT 296
            EE+E RDHR++ +E +LF   E   G  F+  +G +++  L++++R +  +  + E+ T
Sbjct: 294 REEAELRDHRRIGKEQELFFFHELSPGSCFFLPRGTRVYNALVAFIRAEYARRGFSEVKT 353

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKC----------ADDTIKDLR-TFALKPMNCPGHV 345
           P +    LW+QSGHW+ Y+ +MFAV+           +DD+ + +  T ALKPMNCP H 
Sbjct: 354 PTLFSTKLWEQSGHWEHYQEDMFAVQPPGSDRPPSSQSDDSTRHITDTLALKPMNCPAHC 413

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +F H  +S+RELP+RLA+FG+++R E SGSL GL R+R F QDDAH+FCT +Q+  E  
Sbjct: 414 LMFAHRPRSWRELPLRLADFGALHRAEASGSLRGLTRLRCFQQDDAHIFCTTDQLEAEIQ 473

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
              + + S+Y   GF    + LSTRP   +G   LWD AE ++K  L          +N+
Sbjct: 474 SCLDFLRSVYAVLGF-SFRLALSTRPSGFLGDPCLWDQAEQVLKQALKEFGEPWD--LNS 530

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
           G    +GAFYGPK +  L DA+GR  QCGTIQ+DF LP RF+  Y         PV+IHR
Sbjct: 531 G----DGAFYGPKIDVHLHDALGRPHQCGTIQLDFQLPLRFDLQYKGQAGALERPVLIHR 586

Query: 526 AVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD 585
           AV GS+ER +G++ E+  G  PLWLSP Q +V  + +   EYA+E    L++  L  + D
Sbjct: 587 AVLGSMERLLGVLAESCGGKWPLWLSPFQVVVIPVGTEQEEYAREAQQSLQAAGLVSDLD 646

Query: 586 FRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
             +  T++ +IR+  +       + G KE S+R++ IR
Sbjct: 647 ADSGLTLSRRIRQAQLAHYNFQFVVGQKEQSKRTVNIR 684


>gi|311246798|ref|XP_003122346.1| PREDICTED: probable threonyl-tRNA synthetase 2, cytoplasmic-like
           [Sus scrofa]
          Length = 801

 Score =  406 bits (1043), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 229/623 (36%), Positives = 349/623 (56%), Gaps = 22/623 (3%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAH 79
            T   VA  IS+ LA+ AV   +NG++ DL  P+  + ++E++T ++  + AV  HS AH
Sbjct: 178 TTPYQVAAEISQELAESAVIAKVNGELWDLDRPLEGDSTLELLTFDNEEAQAVYWHSSAH 237

Query: 80  IMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQIEKKMQEIIARDSPFLK 138
           ++ EA++  +        P  ++GFY D F +++  SS EL  ++   + II    PF +
Sbjct: 238 VLGEAMELHFGGHLCCSTPT-DEGFYCDMFTEDRAVSSTELPALQSTCEAIIKEQQPFER 296

Query: 139 QYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFF 198
             +S E   ++F+  K  +K  IL         T+YR G   DLC+GPHVR TG+     
Sbjct: 297 LEVSKEVLLDMFKYNK--FKCRILNEKIKTPTTTVYRCGPLVDLCKGPHVRHTGKTNAI- 353

Query: 199 KLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI 258
           K+ K A  YW  +     L R+YG ++   Q +T +    EE++ RDHRK+ +E +LF  
Sbjct: 354 KIFKSASTYWEDNPEMETLQRVYGISFPDDQMMTDWEKLQEEAKTRDHRKIGKEQELFFF 413

Query: 259 AEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRAN 317
            +   G  F+  +G  I+  L+ ++R +  +  + E+ +P +    LW+ SGHW  YR N
Sbjct: 414 HDLSPGSCFFLPRGAFIYNALMDFIREEYHQRSFTEVLSPNMYSSKLWEASGHWQHYREN 473

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           MF      D  KD  TFALKPMNCPGH  +F H  +S+RE+P+R A+FG ++RNE S +L
Sbjct: 474 MFTF----DVDKD--TFALKPMNCPGHCLMFAHRPRSWREMPIRFADFGVLHRNELSETL 527

Query: 378 HGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGS 437
             L  VR F QDDAH+FCT EQ+  E       + S+Y  FGF    + LSTRPE  +G 
Sbjct: 528 SSLTHVRRFQQDDAHIFCTVEQIEEEIKGCLKFLQSVYSTFGF-SFQLNLSTRPEDFLGE 586

Query: 438 DALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ 497
            A+WD+AE  ++  L       + +       G+GAFYGPK +  +KDAIGR  QC TIQ
Sbjct: 587 VAIWDEAEKQLQNSLVEFGKPWKMKP------GDGAFYGPKIDIKIKDAIGRYHQCATIQ 640

Query: 498 VDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI 556
           +DF LP RFN  YV+    +K +PV+IHRA+ GS+ER I I+ EN++G  P WLSP Q I
Sbjct: 641 LDFQLPIRFNLTYVSKEGDDKKNPVIIHRAILGSVERMIAILSENYEGKWPFWLSPRQVI 700

Query: 557 VTTITSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEAS 615
           V  +  +  +YA +++N         + D  +  T+N KI+   + +   I++ G+KE +
Sbjct: 701 VIPVGPACEKYALQVSNEFLEEGFMADVDLDHSCTLNKKIQNAQLAQYNFILVVGEKEKA 760

Query: 616 ERSIGIRRFGSTTTQKVSLLDAI 638
             ++ ++   +    ++S+  AI
Sbjct: 761 NNAVSVQTRDNKIHGEISVTSAI 783


>gi|254692865|ref|NP_082207.2| threonyl-tRNA synthetase, mitochondrial isoform 1 [Mus musculus]
 gi|118597388|sp|Q3UQ84|SYTM_MOUSE RecName: Full=Threonyl-tRNA synthetase, mitochondrial; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS; AltName:
           Full=Threonyl-tRNA synthetase-like 1; Flags: Precursor
 gi|74216488|dbj|BAE25159.1| unnamed protein product [Mus musculus]
 gi|187956085|gb|AAI47502.1| Threonyl-tRNA synthetase 2, mitochondrial (putative) [Mus musculus]
          Length = 723

 Score =  405 bits (1042), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 230/641 (35%), Positives = 350/641 (54%), Gaps = 40/641 (6%)

Query: 5   IKLTFPDGS-IKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           IK++ P+G  +     + T   +A  IS +LA  AVA  +NG++ DL  P+  +  +  +
Sbjct: 66  IKISLPEGQKVDAVAWNTTPYQLAHQISVTLADTAVAAEVNGELYDLDRPLETDCHLRFL 125

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF--DKEQPFSSDELA 120
           T + P   AV  HS AH++  A +     V +  GP  E GFY+DF   KE+   S EL 
Sbjct: 126 TFDSPEGKAVFWHSSAHVLGAAAEQQLGAV-LCRGPSTESGFYHDFFLGKERTVRSAELP 184

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            +E+  QE+IA   PF +   S ++ R+LF  K   +K+ ++E        T+Y  G   
Sbjct: 185 ILERICQELIAAAQPFRRLEASRDQLRQLF--KDNHFKLHLIEEKVTGPTATVYGCGMSV 242

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+R TGQ+    KL+  + A WR       L R+ G ++   + L  +    E 
Sbjct: 243 DLCRGPHLRHTGQIGAL-KLLTNSSALWRSLGAPETLQRVSGISFPKVELLRNWEARREA 301

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQV 299
           +E RDHR++ +E +LF   E   G  F+  +G +++  L++++R +  +  + E+ TP +
Sbjct: 302 AELRDHRRIGKEQELFFFHELSPGSCFFLPRGTRVYNALVAFIRAEYARRGFSEVKTPTL 361

Query: 300 LDQHLWQQSGHWDSYRANMFAVK-----------------CADDTIKDLRTFALKPMNCP 342
               LW+QSGHW+ YRA+MF++K                 C  DT+      ALKPMNCP
Sbjct: 362 FSTKLWEQSGHWEHYRADMFSLKPPGTDGVDNSQSGHPARCPKDTL------ALKPMNCP 415

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN 402
            H  +F H  +S+RELPVRLA+FG+++R E SGSL GL R+  F QDDAH+FC   Q+  
Sbjct: 416 AHCLMFAHRPRSWRELPVRLADFGALHRAEASGSLGGLTRLWRFQQDDAHIFCAPHQLEA 475

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
           E     + +  +Y   GF    + LSTRP   +G   LWD AE +++  L+         
Sbjct: 476 EIQGCLDFLRCVYSVLGF-SFHLALSTRPPGFLGEPRLWDQAEQVLQQALEKFGEPWD-- 532

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
           +N G    +GAFYGPK +  L DA+GR  QCGTIQ+DF LP RF+  Y         PV+
Sbjct: 533 LNPG----DGAFYGPKIDVHLHDALGRPHQCGTIQLDFQLPLRFDLQYKGPAGTPECPVL 588

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSI 582
           IHRAV GS+ER +G++ E+  G  PLWLSP+Q +V  + +   EYA+++   L++  L  
Sbjct: 589 IHRAVLGSVERLLGVLAESCGGKWPLWLSPLQVVVIPVRTEQEEYARQVQQCLQAAGLVS 648

Query: 583 ETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           + D  +  T++ ++R   +       + G +E S+R++ +R
Sbjct: 649 DLDADSGLTLSRRVRRAQLAHYNFQFVVGQREQSQRTVNVR 689


>gi|114559283|ref|XP_001168777.1| PREDICTED: threonyl-tRNA synthetase-like 1 isoform 3 [Pan
           troglodytes]
          Length = 666

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 233/638 (36%), Positives = 348/638 (54%), Gaps = 28/638 (4%)

Query: 2   PSDIKLTFPDGS-IKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
           P  IK++ P G  I     + T   +A  IS +LA  AVA  +NG+  DL  P+   S +
Sbjct: 6   PRTIKISLPGGQKIDAVAWNTTPYQLARQISSTLADTAVAAQVNGEPYDLERPLETDSDL 65

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF--DKEQPFSSD 117
             +T + P   AV  HS  H++  A +     V +  GP  E GFY+DF   KE+     
Sbjct: 66  RFLTFDSPEGKAVFWHSSTHVLGAAAEQFLGAV-LCRGPSTEYGFYHDFFLGKERTIRGS 124

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           EL  +E+  QE+ A   PF +   S ++ R+LF  K   +K+ ++E        T+Y  G
Sbjct: 125 ELPVLERICQELTAAARPFRRLEASRDQLRQLF--KDNPFKLHLIEEKVTGPTATVYGCG 182

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
              DLC+GPH+R TGQ+     L   +  +    +    L R+ G ++ T + L  +  +
Sbjct: 183 TLVDLCQGPHLRHTGQIGGLKLLSNSSSLWRSSGAPE-TLQRVSGISFPTTELLRAWEAW 241

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
            EE+E RDHR++ +E +LF   E   G  F+  +G +++  L++++R +     + E+ T
Sbjct: 242 REEAELRDHRRIGKEQELFFFHELSPGSCFFLPRGTRVYNALVAFIRAEYAHRGFSEVKT 301

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKC----------ADDTIKDLR-TFALKPMNCPGHV 345
           P +    LW+QSGHW+ Y+ +MFAV+           +DD+ + +  T ALKPMNCP H 
Sbjct: 302 PTLFSTKLWEQSGHWEHYQEDMFAVQPPGSDRPPSSQSDDSTRHITDTLALKPMNCPAHC 361

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +F H  +S+RELP+RLA+FG+++R E SG L GL R+R F QDDAH+FCT +Q+  E  
Sbjct: 362 LMFAHRPRSWRELPLRLADFGALHRAEASGGLGGLTRLRCFQQDDAHIFCTTDQLEAEIQ 421

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
              + + S+Y   GF    + LSTRP   +G   LWD AE ++K  L          +N+
Sbjct: 422 SCLDFLRSVYAVLGF-SFRLALSTRPSGFLGDPCLWDQAEQVLKQALKEFGEPWD--LNS 478

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
           G    +GAFYGPK +  L DA+GR  QCGTIQ+DF LP RF+  Y         PV+IHR
Sbjct: 479 G----DGAFYGPKIDVHLHDALGRPHQCGTIQLDFQLPLRFDLQYKGQAGALERPVLIHR 534

Query: 526 AVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD 585
           AV GS+ER +G++ E+  G  PLWLSP Q +V  + S   EYA+E    L++  L  + D
Sbjct: 535 AVLGSVERLLGVLAESCGGKWPLWLSPFQVVVIPVGSEQEEYAKEAQQSLRAAGLVSDLD 594

Query: 586 FRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
             +  T++ +IR   +       + G KE S+R++ IR
Sbjct: 595 ADSGLTLSRRIRRAQLAHYNFQFVVGQKEQSKRTVNIR 632


>gi|293192627|ref|ZP_06609581.1| threonine--tRNA ligase [Actinomyces odontolyticus F0309]
 gi|292820134|gb|EFF79131.1| threonine--tRNA ligase [Actinomyces odontolyticus F0309]
          Length = 677

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 239/673 (35%), Positives = 356/673 (52%), Gaps = 47/673 (6%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
           MP DI L   DG  +  P   TG+   E      ++  VA+ ++G   DL  P   G+ +
Sbjct: 1   MP-DISLVI-DGHEQTVPAGTTGTTWFEK-----SRDVVAIKVDGTPRDLETPFEAGTTV 53

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           E IT      L ++RHS  H++A+AVQ ++P+V + IGP I DGFYYDF      + + L
Sbjct: 54  EAITLASEDGLNILRHSATHVLAQAVQDVFPDVNLGIGPFITDGFYYDFGNIDAVTPELL 113

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIP----------AKE 169
             +EK+M+ I+     F+++ +S E+A    E  ++ YK+E++ +               
Sbjct: 114 RDLEKRMKRIVKEGQRFVRREISEEEAVV--ELAEQPYKLELVTTKGKGAEGASVEVGGG 171

Query: 170 NVTLY----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
            +T+Y    R G   W DLCRGPH+ ST  +   F L K + AYW+GD     L RIYGT
Sbjct: 172 TLTMYDNVRRDGSVAWKDLCRGPHLPSTKLIGNGFALTKASAAYWKGDQAGDQLQRIYGT 231

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISY 282
           AW ++++L  Y   ++E+E+RDHR+L  E+DL+   E+ G G++ +H KG  +   + SY
Sbjct: 232 AWASKEDLVAYQERIKEAERRDHRRLGAELDLYSFPEEIGPGLVVFHPKGGILRHEIESY 291

Query: 283 MRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD-------DTIKDLRTF 334
           +  + K   ++ ++TP++    L+  SGH   Y   MF     D       +  K  + +
Sbjct: 292 VTDRHKAAGFDFVHTPEISKGGLFHTSGHLPYYADTMFPPMLVDEERDEDGNVTKAGQEY 351

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
            LK MNCP H  +F    +SYRELP+R  E G  YR E SG +HGL R+RGFTQDD+H +
Sbjct: 352 YLKAMNCPMHNLIFRSRGRSYRELPLRFYELGHDYRYEKSGVVHGLTRMRGFTQDDSHTY 411

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE------KRVGSDALWDDAENIM 448
           CT EQ   E        +SI   FG +   ++LSTR E      K +GSD  W  A    
Sbjct: 412 CTPEQASEEIRTQIAFFLSILSAFGLKDFYLELSTRDEDGKKKDKFIGSDEDWAAA---T 468

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
           K + D    +  D +      G  AFYGPK    +KDAIGR WQ  TIQ DFN P RF+ 
Sbjct: 469 KALEDACAATGLDLVPD---PGGAAFYGPKVSVQVKDAIGRTWQMSTIQYDFNQPDRFDL 525

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYA 568
            Y  +   +  PVMIH A  GS+ERFIG++ E++ G  P WLSP+Q  +  +  +   Y 
Sbjct: 526 EYTAADGSRQRPVMIHSAKLGSVERFIGVLTEHYAGAFPAWLSPVQVRLIPVAEAFDGYV 585

Query: 569 QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
           +++A  L+   + +ETD  ++    KIR  S  KIP  +I G ++    ++  R    + 
Sbjct: 586 KDVAAKLRERGVRVETDLSDDRFGKKIRNASKDKIPFTLIAGGEDVEAGAVSFRLRDGSQ 645

Query: 629 TQKVSLLDAIPIL 641
              V++  A+ ++
Sbjct: 646 HNGVAVDRAVELI 658


>gi|114559269|ref|XP_001168944.1| PREDICTED: threonyl-tRNA synthetase, mitochondrial isoform 9 [Pan
           troglodytes]
          Length = 718

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 233/638 (36%), Positives = 348/638 (54%), Gaps = 28/638 (4%)

Query: 2   PSDIKLTFPDGS-IKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
           P  IK++ P G  I     + T   +A  IS +LA  AVA  +NG+  DL  P+   S +
Sbjct: 58  PRTIKISLPGGQKIDAVAWNTTPYQLARQISSTLADTAVAAQVNGEPYDLERPLETDSDL 117

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF--DKEQPFSSD 117
             +T + P   AV  HS  H++  A +     V +  GP  E GFY+DF   KE+     
Sbjct: 118 RFLTFDSPEGKAVFWHSSTHVLGAAAEQFLGAV-LCRGPSTEYGFYHDFFLGKERTIRGS 176

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           EL  +E+  QE+ A   PF +   S ++ R+LF  K   +K+ ++E        T+Y  G
Sbjct: 177 ELPVLERICQELTAAARPFRRLEASRDQLRQLF--KDNPFKLHLIEEKVTGPTATVYGCG 234

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
              DLC+GPH+R TGQ+     L   +  +    +    L R+ G ++ T + L  +  +
Sbjct: 235 TLVDLCQGPHLRHTGQIGGLKLLSNSSSLWRSSGAPE-TLQRVSGISFPTTELLRAWEAW 293

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
            EE+E RDHR++ +E +LF   E   G  F+  +G +++  L++++R +     + E+ T
Sbjct: 294 REEAELRDHRRIGKEQELFFFHELSPGSCFFLPRGTRVYNALVAFIRAEYAHRGFSEVKT 353

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKC----------ADDTIKDLR-TFALKPMNCPGHV 345
           P +    LW+QSGHW+ Y+ +MFAV+           +DD+ + +  T ALKPMNCP H 
Sbjct: 354 PTLFSTKLWEQSGHWEHYQEDMFAVQPPGSDRPPSSQSDDSTRHITDTLALKPMNCPAHC 413

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +F H  +S+RELP+RLA+FG+++R E SG L GL R+R F QDDAH+FCT +Q+  E  
Sbjct: 414 LMFAHRPRSWRELPLRLADFGALHRAEASGGLGGLTRLRCFQQDDAHIFCTTDQLEAEIQ 473

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
              + + S+Y   GF    + LSTRP   +G   LWD AE ++K  L          +N+
Sbjct: 474 SCLDFLRSVYAVLGF-SFRLALSTRPSGFLGDPCLWDQAEQVLKQALKEFGEPWD--LNS 530

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
           G    +GAFYGPK +  L DA+GR  QCGTIQ+DF LP RF+  Y         PV+IHR
Sbjct: 531 G----DGAFYGPKIDVHLHDALGRPHQCGTIQLDFQLPLRFDLQYKGQAGALERPVLIHR 586

Query: 526 AVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD 585
           AV GS+ER +G++ E+  G  PLWLSP Q +V  + S   EYA+E    L++  L  + D
Sbjct: 587 AVLGSVERLLGVLAESCGGKWPLWLSPFQVVVIPVGSEQEEYAKEAQQSLRAAGLVSDLD 646

Query: 586 FRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
             +  T++ +IR   +       + G KE S+R++ IR
Sbjct: 647 ADSGLTLSRRIRRAQLAHYNFQFVVGQKEQSKRTVNIR 684


>gi|260901781|ref|ZP_05910176.1| threonine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
 gi|308108104|gb|EFO45644.1| threonine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
          Length = 386

 Score =  404 bits (1039), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 186/388 (47%), Positives = 258/388 (66%), Gaps = 13/388 (3%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRA 316
           + ++  G++FWH  GW IF+ L  ++R K+ + DY+E+  P ++D+ LW++SGHWD Y  
Sbjct: 1   MQQEAPGMVFWHHNGWSIFRDLEVFVRDKLNEYDYQEVKGPLMMDRVLWERSGHWDKYAD 60

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+AEFGS +RNEPSG+
Sbjct: 61  AMFT------TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGA 114

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
           LHG+MRVRGFTQDDAH+FCT+ Q+  E      ++   Y+ FGF+ I+VKLSTRPEKRVG
Sbjct: 115 LHGIMRVRGFTQDDAHIFCTESQIQEEVTSCIKMVYDTYQTFGFDNIVVKLSTRPEKRVG 174

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
           SD +WD +E  +K  L++++      I   +  GEGAFYGPK E+ L D + R WQCGT+
Sbjct: 175 SDEIWDQSEEALKQSLESME------IPYEIQEGEGAFYGPKIEFTLYDCLDRAWQCGTV 228

Query: 497 QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI 556
           Q+DFNLP R  A YV  ++E+  PVMIHRA+ GS+ERFIGI+IE + G  P WL+P QA+
Sbjct: 229 QLDFNLPGRLGATYVGENNERLVPVMIHRAILGSLERFIGILIEEYAGFFPTWLAPEQAV 288

Query: 557 VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASE 616
           +  IT     Y QEI   L+   +  + D RNE I +KIREH++K++P +++ GD+E   
Sbjct: 289 LMNITDKQSGYVQEIVQKLQKSGIRAKADLRNEKIGFKIREHTLKRVPYMLVVGDQEMEA 348

Query: 617 RSIGIRRFGSTTTQKVSLLDAIPILTKE 644
             I +R        K  + D I  +  E
Sbjct: 349 GEIAVRTRKGKDLGKFKVDDFIAYIQDE 376


>gi|238504300|ref|XP_002383381.1| threonyl-tRNA synthetase, putative [Aspergillus flavus NRRL3357]
 gi|317138130|ref|XP_001816697.2| threonyl-tRNA synthetase, cytoplasmic [Aspergillus oryzae RIB40]
 gi|220690852|gb|EED47201.1| threonyl-tRNA synthetase, putative [Aspergillus flavus NRRL3357]
          Length = 721

 Score =  404 bits (1039), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 222/646 (34%), Positives = 356/646 (55%), Gaps = 44/646 (6%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAH 79
            T + + +++ + L+   V   ++ ++ DLS P+  + ++  +  EDP    V  HS AH
Sbjct: 74  TTPAQLLKNVPKELSATIVLAKVDNELWDLSRPLEGDCTVSYVRFEDPEGREVFWHSSAH 133

Query: 80  IMAEAVQSIWPEVQVAIGPIIEDGFYYDF--DKEQPFSSDELAQIEKKMQEIIARDSPFL 137
            + EA +  +  + ++ GP    GF+YD      +     +   ++K    +      F 
Sbjct: 134 CLGEACECEYGCL-LSHGPPTPQGFFYDMAMPDNRVVRETDWPALDKHANRVFKEKQSFD 192

Query: 138 KQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
           +  ++ E  +++F   K  YK+  ++ +   E  T+YR G   DLCRGPH+++TG++K F
Sbjct: 193 RLEVTKENLKKMFAYSK--YKLHYIDKLVTGEKSTVYRCGTLVDLCRGPHIQNTGKIKTF 250

Query: 198 FKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFH 257
            K+M+ + AY+ GD +   L RI G A+  ++++ ++L FLEE+EKR+H K+ +E +LF 
Sbjct: 251 -KIMQNSSAYFLGDQSNDSLQRIRGVAFPDKKQMQEHLKFLEEAEKRNHVKIGKEQELFF 309

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
             E   G  F    G KIF  L + +R +  K  Y+E+ TP + D  +W+ SGHW  Y+ 
Sbjct: 310 FDEVSPGCPFLLPNGTKIFNALQTLLRSEYRKRGYQEVQTPNMYDVGIWKTSGHWAHYKD 369

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
           +MF +        + R +ALKPMNCPGH  +F H  +SYRELP+RLA+FG ++RNE SG+
Sbjct: 370 DMFKLDV------EKREWALKPMNCPGHFVLFGHRERSYRELPLRLADFGVLHRNEASGA 423

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
           L GL RVR F QDD H+FCT++Q+ +E   + + + SIY  FGF    +KLSTRPEK +G
Sbjct: 424 LSGLTRVRKFQQDDTHIFCTQDQITSEIEGLFDFLQSIYGLFGF-TFKLKLSTRPEKYLG 482

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
               W+ AE  +K  +   K       +  +  G+GAFYGPK +  + DA+ R++QC TI
Sbjct: 483 ELETWNYAEEQLKAAMTKFKGD-----DWTIDEGDGAFYGPKIDITIADALKREFQCATI 537

Query: 497 QVDFNLPSRFNAFYV------------------NSHSE----KCHPVMIHRAVFGSIERF 534
           Q+D+  P  F   Y+                  N  SE    +  PV+IHRA+ GS ERF
Sbjct: 538 QLDYQAPINFKLEYMSNEKADKSQAAAESAEGENKSSEPGPGRARPVVIHRAIIGSFERF 597

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
           +GI+ E+F G  P W+SP Q ++  +  +  +Y +E+  +L+   L+++ D    T+  K
Sbjct: 598 LGILTEHFGGKWPFWISPRQILIVPVMPAVNDYVEELQTILRGDKLNVDIDISGNTMQKK 657

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
           IR   + +   I + G +E   R++ IR      TQK  ++  IP+
Sbjct: 658 IRTGQLAQYNFIFVVGAQEKEARTVNIRNRDDPATQKQGVM--IPL 701


>gi|320167861|gb|EFW44760.1| threonyl-tRNA synthetase [Capsaspora owczarzaki ATCC 30864]
          Length = 726

 Score =  404 bits (1039), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 237/629 (37%), Positives = 342/629 (54%), Gaps = 28/629 (4%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS--IEIITPEDPRSLAVIRHSCA 78
           +T   +AE++ ++     +A  +NG+V DL D V E    +E +T ED  + AV  HS A
Sbjct: 94  STPQSIAETMFKNTDHIIIA-KVNGEVFDL-DRVLEADCKLEFLTWEDDEAKAVFWHSSA 151

Query: 79  HIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQIEKKMQEIIARDSPFL 137
           H++ E+++  +    +  GP I++GFYYD   E +     E   I K  + I      F 
Sbjct: 152 HMLGESLELQYGGC-LCYGPPIDEGFYYDMHLENRTVLPGEFGNINKLTERIAKEKQQFE 210

Query: 138 KQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
           +  LS     E+F  K   +K  I+      +  T+YR G   DLCRGPHVR TG+VK F
Sbjct: 211 RLELSKADLLEMF--KYNTFKQRIINERVTTDRTTVYRCGPLIDLCRGPHVRHTGKVKSF 268

Query: 198 FKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFH 257
             + K + +YW G ++   L R+YG ++   + +  +  F  E+ KRDHRKL  E  LF 
Sbjct: 269 -AVTKSSASYWEGKADAETLQRVYGVSFPDVKMMKDWEKFQLEAAKRDHRKLGTEQSLFF 327

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
             E   G  F+   G +I+ TL+ ++R +     + E+ TP + +  LWQQSGHW  Y  
Sbjct: 328 FHELSPGSCFFLPHGTRIYNTLMEFIRSEYWARGFTEVITPNMYNSKLWQQSGHWQHYAE 387

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
           NMF+     +       FALKPMNCPGH  +F+   +S++ELP+R A+FG ++RNE SG+
Sbjct: 388 NMFSFDIEKEK------FALKPMNCPGHCLMFDQAFRSHKELPIRFADFGVLHRNEASGA 441

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
           L GL RVR F QDDAH+FC    + NE       + ++Y  FGF    +KLSTRPE  +G
Sbjct: 442 LTGLTRVRRFQQDDAHIFCKPSDIANEIDNALAFLKAVYTVFGF-TFQLKLSTRPEGFLG 500

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
             ALWD AE  ++  L+  K  +  ++N G    +GAFYGPK +  + DA+ R  QC TI
Sbjct: 501 DIALWDKAEKQLEESLN--KFGAPWKLNPG----DGAFYGPKIDITIMDALRRSHQCATI 554

Query: 497 QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI 556
           Q+DF LP RF   Y      +  PV+IHRA+ GS+ER I I+ ENF G  P WLSP QA+
Sbjct: 555 QLDFQLPIRFGLKYQAPDGTEQTPVIIHRAILGSVERMIAILTENFAGKWPFWLSPRQAL 614

Query: 557 VTTITSSAVEYAQEIANLLKSHHLSIETD-FRNETINYKIREHSIKKIPIIIICGDKEAS 615
           V  ++    +YA E+   L      ++ D + +ET+N K+R   + +   I++ G +E  
Sbjct: 615 VIAVSKDCNDYAHEVQKQLHDAGFHVDYDLWPDETLNKKVRNAQLAQYNFILVVGARERE 674

Query: 616 ERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            RS  +R    T   KV     IP L  E
Sbjct: 675 SRSANVR----TRDNKVHGERTIPQLIAE 699


>gi|169617674|ref|XP_001802251.1| hypothetical protein SNOG_12019 [Phaeosphaeria nodorum SN15]
 gi|111059311|gb|EAT80431.1| hypothetical protein SNOG_12019 [Phaeosphaeria nodorum SN15]
          Length = 779

 Score =  404 bits (1039), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 239/700 (34%), Positives = 365/700 (52%), Gaps = 75/700 (10%)

Query: 4   DIKLTFPDGSI-KNFPVHATGSDVAESISRSLAKKAVAVAING-----KVCDLSDPVREG 57
           +I ++  DG I +      + +D+A  IS+SL ++ V   ++       + DL  P+ + 
Sbjct: 84  NINISLGDGKIIEGKSWETSPADIARGISKSLFERTVIARLDKGTPEETLWDLERPLEKS 143

Query: 58  -SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD--FDKEQPF 114
             +E++  +DP    V  HS AHI+ EA +  +    + IGP +EDGFYY+    ++   
Sbjct: 144 CKLELLPFDDPEGKKVFWHSSAHILGEASERRF-GCDLCIGPPVEDGFYYEMALPEKAAV 202

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTL 173
              +   +E  +  I+     F +  LS E   E+F+S    YK  I+ + I    + T+
Sbjct: 203 EQADYKPLETIVNNIVKEKQVFQRLVLSKEDLLEMFKSN--PYKQHIIKDKIADGTSTTV 260

Query: 174 YRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQ 233
           YR G   DLCRGPHV  TG++K+F K+MK + +Y+ GD+N   L RIYG ++  +  +  
Sbjct: 261 YRNGPLIDLCRGPHVPHTGRIKQF-KVMKNSASYFLGDANNDSLQRIYGVSFPDKDAMQA 319

Query: 234 YLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYE 292
           +L FLEE+ KRDHRK+ +E +LF   E   G  F+   G  IF TL +++R +     Y+
Sbjct: 320 HLKFLEEAAKRDHRKIGKEQELFFFHEASPGSPFFLPHGQIIFNTLQAFLREEYWNRGYQ 379

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+ +P +    LW+ SGHW  Y  +MF      +       + LKPMNCPGH  +F H  
Sbjct: 380 EVQSPNMYSSALWKVSGHWQHYHEDMFTFDVEKEK------WGLKPMNCPGHALIFKHRE 433

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
           +SYRELP+R+A+FG ++RNE SG+L GL RVR F QDD H+FCT++Q+  E   + + + 
Sbjct: 434 RSYRELPIRMADFGVLHRNEASGALTGLTRVRRFQQDDTHIFCTQDQITEEIFGLFDFLR 493

Query: 413 SIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD--TIKNSSQDRINTGVLLG 470
           ++Y  FGF    +KLSTRP+  +G    W+ AE  +   L+  T +   Q  +N     G
Sbjct: 494 AVYGKFGF-TFKLKLSTRPDGFLGEVETWNKAEAKLTEALNQFTAEGGGQWELNP----G 548

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK------------- 517
           +GAFYGPK +  + DA+ R++QC TIQ+DF LP++F   Y+ S                 
Sbjct: 549 DGAFYGPKIDITISDALKREFQCATIQLDFQLPNQFELEYMTSEVAAAKPKEEKAKEEPA 608

Query: 518 ------------------------------CHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
                                           PVMIHRA++GS ERFI I+ E+F G  P
Sbjct: 609 PKDAPAPVEQKKEAADPNAPKKIQPPQPGYARPVMIHRAIYGSFERFIAIITEHFAGRWP 668

Query: 548 LWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIII 607
            WLSP Q +V  +  SA +Y +E+  +L+ +    + D    T+  KIR   +     I+
Sbjct: 669 FWLSPRQVMVIPVMPSANDYVKEVQAVLRKNKFHADIDVSGNTMQKKIRTAQLSLYNFIM 728

Query: 608 ICGDKEASERSIGIRRFGSTTTQK----VSLLDAIPILTK 643
           + G +E   R++  R      TQ+    V L +A+  L K
Sbjct: 729 VVGAEEQKARAVNWRNRDDQATQQRGEIVPLDEAVEKLCK 768


>gi|83764551|dbj|BAE54695.1| unnamed protein product [Aspergillus oryzae]
          Length = 717

 Score =  404 bits (1038), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 222/646 (34%), Positives = 356/646 (55%), Gaps = 44/646 (6%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAH 79
            T + + +++ + L+   V   ++ ++ DLS P+  + ++  +  EDP    V  HS AH
Sbjct: 70  TTPAQLLKNVPKELSATIVLAKVDNELWDLSRPLEGDCTVSYVRFEDPEGREVFWHSSAH 129

Query: 80  IMAEAVQSIWPEVQVAIGPIIEDGFYYDF--DKEQPFSSDELAQIEKKMQEIIARDSPFL 137
            + EA +  +  + ++ GP    GF+YD      +     +   ++K    +      F 
Sbjct: 130 CLGEACECEYGCL-LSHGPPTPQGFFYDMAMPDNRVVRETDWPALDKHANRVFKEKQSFD 188

Query: 138 KQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
           +  ++ E  +++F   K  YK+  ++ +   E  T+YR G   DLCRGPH+++TG++K F
Sbjct: 189 RLEVTKENLKKMFAYSK--YKLHYIDKLVTGEKSTVYRCGTLVDLCRGPHIQNTGKIKTF 246

Query: 198 FKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFH 257
            K+M+ + AY+ GD +   L RI G A+  ++++ ++L FLEE+EKR+H K+ +E +LF 
Sbjct: 247 -KIMQNSSAYFLGDQSNDSLQRIRGVAFPDKKQMQEHLKFLEEAEKRNHVKIGKEQELFF 305

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
             E   G  F    G KIF  L + +R +  K  Y+E+ TP + D  +W+ SGHW  Y+ 
Sbjct: 306 FDEVSPGCPFLLPNGTKIFNALQTLLRSEYRKRGYQEVQTPNMYDVGIWKTSGHWAHYKD 365

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
           +MF +        + R +ALKPMNCPGH  +F H  +SYRELP+RLA+FG ++RNE SG+
Sbjct: 366 DMFKLDV------EKREWALKPMNCPGHFVLFGHRERSYRELPLRLADFGVLHRNEASGA 419

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
           L GL RVR F QDD H+FCT++Q+ +E   + + + SIY  FGF    +KLSTRPEK +G
Sbjct: 420 LSGLTRVRKFQQDDTHIFCTQDQITSEIEGLFDFLQSIYGLFGF-TFKLKLSTRPEKYLG 478

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
               W+ AE  +K  +   K       +  +  G+GAFYGPK +  + DA+ R++QC TI
Sbjct: 479 ELETWNYAEEQLKAAMTKFKGD-----DWTIDEGDGAFYGPKIDITIADALKREFQCATI 533

Query: 497 QVDFNLPSRFNAFYV------------------NSHSE----KCHPVMIHRAVFGSIERF 534
           Q+D+  P  F   Y+                  N  SE    +  PV+IHRA+ GS ERF
Sbjct: 534 QLDYQAPINFKLEYMSNEKADKSQAAAESAEGENKSSEPGPGRARPVVIHRAIIGSFERF 593

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
           +GI+ E+F G  P W+SP Q ++  +  +  +Y +E+  +L+   L+++ D    T+  K
Sbjct: 594 LGILTEHFGGKWPFWISPRQILIVPVMPAVNDYVEELQTILRGDKLNVDIDISGNTMQKK 653

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
           IR   + +   I + G +E   R++ IR      TQK  ++  IP+
Sbjct: 654 IRTGQLAQYNFIFVVGAQEKEARTVNIRNRDDPATQKQGVM--IPL 697


>gi|20070344|ref|NP_079426.2| threonyl-tRNA synthetase, mitochondrial precursor [Homo sapiens]
 gi|74752395|sp|Q9BW92|SYTM_HUMAN RecName: Full=Threonyl-tRNA synthetase, mitochondrial; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS; AltName:
           Full=Threonyl-tRNA synthetase-like 1; Flags: Precursor
 gi|12802990|gb|AAH00541.1| Threonyl-tRNA synthetase 2, mitochondrial (putative) [Homo sapiens]
 gi|14603040|gb|AAH09997.1| Threonyl-tRNA synthetase 2, mitochondrial (putative) [Homo sapiens]
 gi|55958996|emb|CAI15488.1| threonyl-tRNA synthetase 2, mitochondrial (putative) [Homo sapiens]
 gi|119573933|gb|EAW53548.1| threonyl-tRNA synthetase-like 1, isoform CRA_a [Homo sapiens]
 gi|168275836|dbj|BAG10638.1| threonyl-tRNA synthetase [synthetic construct]
          Length = 718

 Score =  404 bits (1038), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 233/638 (36%), Positives = 348/638 (54%), Gaps = 28/638 (4%)

Query: 2   PSDIKLTFPDGS-IKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
           P  IK++ P G  I     + T   +A  IS +LA  AVA  +NG+  DL  P+   S +
Sbjct: 58  PRTIKISLPGGQKIDAVAWNTTPYQLARQISSTLADTAVAAQVNGEPYDLERPLETDSDL 117

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF--DKEQPFSSD 117
             +T + P   AV  HS  H++  A +     V +  GP  E GFY+DF   KE+     
Sbjct: 118 RFLTFDSPEGKAVFWHSSTHVLGAAAEQFLGAV-LCRGPSTEYGFYHDFFLGKERTIRGS 176

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           EL  +E+  QE+ A   PF +   S ++ R+LF  K   +K+ ++E        T+Y  G
Sbjct: 177 ELPVLERICQELTAAARPFRRLEASRDQLRQLF--KDNPFKLHLIEEKVTGPTATVYGCG 234

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
              DLC+GPH+R TGQ+     L   +  +    +    L R+ G ++ T + L  +  +
Sbjct: 235 TLVDLCQGPHLRHTGQIGGLKLLSNSSSLWRSSGAPE-TLQRVSGISFPTTELLRVWEAW 293

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
            EE+E RDHR++ +E +LF   E   G  F+  +G +++  L++++R +     + E+ T
Sbjct: 294 REEAELRDHRRIGKEQELFFFHELSPGSCFFLPRGTRVYNALVAFIRAEYAHRGFSEVKT 353

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKC----------ADDTIKDLR-TFALKPMNCPGHV 345
           P +    LW+QSGHW+ Y+ +MFAV+           +DD+ + +  T ALKPMNCP H 
Sbjct: 354 PTLFSTKLWEQSGHWEHYQEDMFAVQPPGSDRPPSSQSDDSTRHITDTLALKPMNCPAHC 413

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +F H  +S+RELP+RLA+FG+++R E SG L GL R+R F QDDAH+FCT +Q+  E  
Sbjct: 414 LMFAHRPRSWRELPLRLADFGALHRAEASGGLGGLTRLRCFQQDDAHIFCTTDQLEAEIQ 473

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
              + + S+Y   GF    + LSTRP   +G   LWD AE ++K  L          +N+
Sbjct: 474 SCLDFLRSVYAVLGF-SFRLALSTRPSGFLGDPCLWDQAEQVLKQALKEFGEPWD--LNS 530

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
           G    +GAFYGPK +  L DA+GR  QCGTIQ+DF LP RF+  Y         PV+IHR
Sbjct: 531 G----DGAFYGPKIDVHLHDALGRPHQCGTIQLDFQLPLRFDLQYKGQAGALERPVLIHR 586

Query: 526 AVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD 585
           AV GS+ER +G++ E+  G  PLWLSP Q +V  + S   EYA+E    L++  L  + D
Sbjct: 587 AVLGSVERLLGVLAESCGGKWPLWLSPFQVVVIPVGSEQEEYAKEAQQSLRAAGLVSDLD 646

Query: 586 FRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
             +  T++ +IR   +       + G KE S+R++ IR
Sbjct: 647 ADSGLTLSRRIRRAQLAHYNFQFVVGQKEQSKRTVNIR 684


>gi|225374732|ref|ZP_03751953.1| hypothetical protein ROSEINA2194_00352 [Roseburia inulinivorans DSM
           16841]
 gi|225213424|gb|EEG95778.1| hypothetical protein ROSEINA2194_00352 [Roseburia inulinivorans DSM
           16841]
          Length = 594

 Score =  404 bits (1038), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 219/586 (37%), Positives = 357/586 (60%), Gaps = 27/586 (4%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE-LAQIEKKMQE 128
           L  + HSCAH+MA+AV+ ++P+ +  +GP++++GFYYD D      +DE +A IEK+M++
Sbjct: 13  LNTLNHSCAHVMAQAVKHLYPQAKFWVGPVVKEGFYYDIDLGDDIINDEAIAAIEKEMKK 72

Query: 129 IIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           +        ++ +S  +A E+F  K + YK++++E +    N+++Y QG++ DLCRGPHV
Sbjct: 73  VCKEGKKIYRREISKAEAMEMF--KDDPYKLDLIEGL-EDGNISVYDQGDFTDLCRGPHV 129

Query: 189 RSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRK 248
            +T ++ K FKL+K +G YW+GD+N  ++ RIYG  + T +EL ++L  LEE++ RDHRK
Sbjct: 130 DNT-KLCKNFKLVKYSGVYWKGDANNHVMQRIYGVCFPTPEELEEHLKLLEEAKDRDHRK 188

Query: 249 LAREMDLFHIAED--GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLW 305
           + +EM+LF +++D  G G+  +  KG+ ++Q L +Y++ K  K  Y  + TP V   +L+
Sbjct: 189 IGKEMNLF-MSDDLVGRGLPMFLPKGYTVWQELENYIKAKERKLGYLHVMTPCVGTVNLY 247

Query: 306 QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEF 365
           + SGHWD Y+ NMF     +       +F L+PMNCP H+ ++ + + SY++LP+R+ E 
Sbjct: 248 KTSGHWDHYKDNMFPAMEVEG-----ESFVLRPMNCPHHMMIYANRMHSYKDLPIRIGEI 302

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
              +R E SG+L G+ R R F Q+DAH+F T EQ+ +E  ++ +LI   YKDF       
Sbjct: 303 AHDFRFEASGTLKGIERGRHFCQNDAHLFVTPEQIESEFSQVVDLIFDTYKDFNITDYRC 362

Query: 426 KLSTR-PEKRV---GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            LS R P  +V     D +W+ AEN ++ VLD +     + I      GE AFYGPK + 
Sbjct: 363 VLSLRDPADKVKYHDDDEMWNTAENALRKVLDDLGIDYTEEI------GEAAFYGPKLDV 416

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +K AIG ++   T Q+DF LP +FN  Y++    K  PV++HRA+ GS++RF+  ++E 
Sbjct: 417 NVKPAIGNEYTLSTCQLDFCLPEKFNLTYIDKDGTKKTPVVLHRAILGSLDRFMAYILEE 476

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVE---YAQEIANLLKSHHLSIETDFRNETINYKIREH 598
            KGNLPLWL+P+QA +  + +   E   Y+ E+ + L  + + +E D R E + Y++R  
Sbjct: 477 TKGNLPLWLAPVQARIIPVKNEDEELNAYSHELLSYLDENGIRVEIDERAEKLGYRVRAA 536

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            ++K+P +II G  E  + ++  R  G   T  V   + + +L  E
Sbjct: 537 QVEKVPYLIILGKNEVKDGTVSYRLHGEQATTTVPKEEFLAMLKDE 582


>gi|73981325|ref|XP_850160.1| PREDICTED: similar to threonyl-tRNA synthetase-like 1 isoform 2
           [Canis familiaris]
          Length = 721

 Score =  404 bits (1038), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 223/637 (35%), Positives = 347/637 (54%), Gaps = 32/637 (5%)

Query: 5   IKLTFPDGS-IKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEII 62
           IK+T P G  +     + T   +A+ +S ++A   VA  +NG++ DL  P+   S ++ +
Sbjct: 64  IKITLPGGQKVDAVAWNTTPYQLAQQMSSTVADTVVAAQVNGELYDLERPLETDSDLKFL 123

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF--DKEQPFSSDELA 120
           T       AV  HS  H++  A + +   V +  GP  E GFY+DF   KE+     EL 
Sbjct: 124 TFSSAEGKAVFWHSSTHVLGAAAEQLLGAV-LCRGPSTECGFYHDFFLGKERTVRGSELP 182

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            +E+  QE++A   PF +  +S ++ R+LF  K   +K+ ++E        T+Y  G   
Sbjct: 183 ALEQICQELVAAAHPFRRLEVSQDQLRQLF--KDNPFKLRLIEEKVTGPTATVYGCGMLV 240

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+R TGQ+    KL+  + + WR       L R+ G ++ T +EL  +  +  E
Sbjct: 241 DLCRGPHLRHTGQIGGL-KLLTNSSSLWRSSGTPETLQRVSGISFPTVEELRAWEEWKGE 299

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQV 299
           +E RDHR++ +  +LF   E   G  F+  +G +++  L++++R +  +  + E+ TP +
Sbjct: 300 AELRDHRRIGKAQELFFFHELSPGSCFFLPRGTRVYNALVAFIRAEYTRRGFSEVKTPTL 359

Query: 300 LDQHLWQQSGHWDSYRANMFAVK-------------CADDTIKDLRTFALKPMNCPGHVA 346
               LW+ SGHW+ Y+ +MF ++             C+     D  T ALKPMNCP H  
Sbjct: 360 FSAKLWELSGHWEHYQEDMFVLQPPGSDRLASSLSVCSTSHSTD--TLALKPMNCPAHCL 417

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           +F H  +S+RELP+RLA+FG ++R E SGSL GL R+R F QDDAH+FC  +Q+  E   
Sbjct: 418 MFAHRPRSWRELPLRLADFGVLHRAEASGSLGGLTRLRCFQQDDAHIFCAPDQLEEEIQG 477

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
             + + S+Y   GF    + LSTRP   +G   LWD AE +++  L+        +    
Sbjct: 478 CLDFLRSVYAVLGF-SFRLALSTRPSGFLGESCLWDQAEQVLQRALEEFGEPWDLKP--- 533

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
              G+GAFYGPK +  L DA+GR  QCGTIQ+DF LP RF+  Y         PV+IHRA
Sbjct: 534 ---GDGAFYGPKIDVHLHDALGRPHQCGTIQLDFQLPLRFDLQYKGQAGVLERPVLIHRA 590

Query: 527 VFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF 586
           V GS+ER +G++ E++ G  PLWLSP Q +V  + +   EYA+E    L++  L  + D 
Sbjct: 591 VLGSVERMLGVLAESYGGKWPLWLSPFQVVVIPVGAEQEEYAREAQQRLQAAGLVCDLDA 650

Query: 587 RNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
            +  T++ ++R   +       + G KE S++++ IR
Sbjct: 651 DSGLTLSRRVRRAQLAHYNFQFVVGQKEQSKKTVNIR 687


>gi|119194837|ref|XP_001248022.1| threonyl-tRNA synthetase, cytoplasmic [Coccidioides immitis RS]
          Length = 757

 Score =  404 bits (1038), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 225/648 (34%), Positives = 348/648 (53%), Gaps = 54/648 (8%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGK-VCDLSDPV-REGSIEIITPEDPRSLAVIRHSCA 78
           +T     + I + L+   V   ++GK + DL  P+ R+  +  +  +      V  HS A
Sbjct: 98  STPGSFLKDIPKELSSNVVIAKLDGKQLWDLDRPLERDCRVSYLPFDSAEGREVFWHSSA 157

Query: 79  HIMAEAVQSIWPEVQVAIGPIIEDGFYYD--FDKEQPFSSDELAQIEKKMQEIIARDSPF 136
           H++ EA +  +    ++ GP    GF+YD      +     +   ++ +   I      F
Sbjct: 158 HVLGEAAECEY-GCMLSHGPPTAQGFFYDMALPDNRVVKESDWPSLDSRSARIFKEKQSF 216

Query: 137 LKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKK 196
            +  +S E  R++F   K  YK+  + ++   E+ T+YR G   DLCRGPH+++TG++K 
Sbjct: 217 DRLEVSKENLRKMFSYSK--YKMHYINNLVEGESSTVYRCGTLVDLCRGPHIQNTGKIKA 274

Query: 197 FFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLF 256
             K+M+ + AY+ GD +   L RI G A+  ++ L ++L FLEE+EKR+H K+ +E +LF
Sbjct: 275 M-KIMQNSSAYFLGDQSNDSLQRIRGVAFPDKKSLQEHLKFLEEAEKRNHLKIGKEQELF 333

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYR 315
              E   G  F    G KIF  L   +R +  K  Y+E+ +P + D  LW+ SGHW+ Y+
Sbjct: 334 FFDEVSPGCPFLLPNGTKIFNALQKLLRTEYRKRGYQEVQSPNMYDVGLWRTSGHWNHYK 393

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            +MF +        + R +ALKPMNCPGH  +FNH  +SYRELP+R+A+FG ++RNE SG
Sbjct: 394 DDMFKLAV------EKREWALKPMNCPGHCIMFNHRERSYRELPLRMADFGVLHRNEASG 447

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
           +LHGL RVR F QDD H+FCT++Q+  E   + + + +IY  FGF    +KLSTRPEK +
Sbjct: 448 ALHGLTRVRKFQQDDTHIFCTEDQITQEIEGLFDFLRAIYGLFGF-SFKLKLSTRPEKYL 506

Query: 436 GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGT 495
           G    WD AE  +K  L   K S  +     +  G+GAFYGPK +  ++DA+ R++QC T
Sbjct: 507 GKLETWDFAEAQLKEALTRFKGSDWE-----IDEGDGAFYGPKIDITIQDALKREFQCAT 561

Query: 496 IQVDFNLPSRFNAFYVNSHSEK---------------------------------CHPVM 522
           IQ+D+ LP  F   Y+ +   K                                   PVM
Sbjct: 562 IQLDYQLPQNFKLEYMTNEIAKPKAPEPKKEESGPREGGDSKAADSDDGVPGPGRARPVM 621

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSI 582
           IHRA+ GS ERF GI+IE+F G  P WLSP Q ++  +  +  +Y +E+  +L+   L++
Sbjct: 622 IHRAIIGSFERFFGILIEHFGGKWPFWLSPRQILIVPVMPAVYDYVEELQGILRGDKLNV 681

Query: 583 ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
           + D    T+  KIR   + +   I + G +E   R++ IR     ++Q
Sbjct: 682 DIDVSGNTLQKKIRNGQLAQYNFIFVVGAQEKETRTVNIRNRDDPSSQ 729


>gi|39644807|gb|AAH07824.2| TARS2 protein [Homo sapiens]
          Length = 709

 Score =  404 bits (1038), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 233/638 (36%), Positives = 348/638 (54%), Gaps = 28/638 (4%)

Query: 2   PSDIKLTFPDGS-IKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
           P  IK++ P G  I     + T   +A  IS +LA  AVA  +NG+  DL  P+   S +
Sbjct: 49  PRTIKISLPGGQKIDAVAWNTTPYQLARQISSTLADTAVAAQVNGEPYDLERPLETDSDL 108

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF--DKEQPFSSD 117
             +T + P   AV  HS  H++  A +     V +  GP  E GFY+DF   KE+     
Sbjct: 109 RFLTFDSPEGKAVFWHSSTHVLGAAAEQFLGAV-LCRGPSTEYGFYHDFFLGKERTIRGS 167

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           EL  +E+  QE+ A   PF +   S ++ R+LF  K   +K+ ++E        T+Y  G
Sbjct: 168 ELPVLERICQELTAAARPFRRLEASRDQLRQLF--KDNPFKLHLIEEKVTGPTATVYGCG 225

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
              DLC+GPH+R TGQ+     L   +  +    +    L R+ G ++ T + L  +  +
Sbjct: 226 TLVDLCQGPHLRHTGQIGGLKLLSNSSSLWRSSGAPE-TLQRVSGISFPTTELLRVWEAW 284

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
            EE+E RDHR++ +E +LF   E   G  F+  +G +++  L++++R +     + E+ T
Sbjct: 285 REEAELRDHRRIGKEQELFFFHELSPGSCFFLPRGTRVYNALVAFIRAEYAHRGFSEVKT 344

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKC----------ADDTIKDLR-TFALKPMNCPGHV 345
           P +    LW+QSGHW+ Y+ +MFAV+           +DD+ + +  T ALKPMNCP H 
Sbjct: 345 PTLFSTKLWEQSGHWEHYQEDMFAVQPPGSDRPPSSQSDDSTRHITDTLALKPMNCPAHC 404

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +F H  +S+RELP+RLA+FG+++R E SG L GL R+R F QDDAH+FCT +Q+  E  
Sbjct: 405 LMFAHRPRSWRELPLRLADFGALHRAEASGGLGGLTRLRCFQQDDAHIFCTTDQLEAEIQ 464

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
              + + S+Y   GF    + LSTRP   +G   LWD AE ++K  L          +N+
Sbjct: 465 SCLDFLRSVYAVLGF-SFRLALSTRPSGFLGDPCLWDQAEQVLKQALKEFGEPWD--LNS 521

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
           G    +GAFYGPK +  L DA+GR  QCGTIQ+DF LP RF+  Y         PV+IHR
Sbjct: 522 G----DGAFYGPKIDVHLHDALGRPHQCGTIQLDFQLPLRFDLQYKGQAGALERPVLIHR 577

Query: 526 AVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD 585
           AV GS+ER +G++ E+  G  PLWLSP Q +V  + S   EYA+E    L++  L  + D
Sbjct: 578 AVLGSVERLLGVLAESCGGKWPLWLSPFQVVVIPVGSEQEEYAKEAQQSLRAAGLVSDLD 637

Query: 586 FRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
             +  T++ +IR   +       + G KE S+R++ IR
Sbjct: 638 ADSGLTLSRRIRRAQLAHYNFQFVVGQKEQSKRTVNIR 675


>gi|62897187|dbj|BAD96534.1| threonyl-tRNA synthetase-like 1 variant [Homo sapiens]
          Length = 718

 Score =  404 bits (1038), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 233/638 (36%), Positives = 347/638 (54%), Gaps = 28/638 (4%)

Query: 2   PSDIKLTFPDGS-IKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
           P  IK++ P G  I     + T   +A  IS +LA  AVA  +NG+  DL  P+   S +
Sbjct: 58  PRTIKISLPGGQKIDAVAWNTTPYQLARQISSTLADTAVAAQVNGEPYDLERPLETDSDL 117

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF--DKEQPFSSD 117
             +T + P   AV  HS  H++  A +     V +  GP  E GFY+DF   KE+     
Sbjct: 118 RFLTFDSPEGKAVFWHSSTHVLGAAAEQFLGAV-LCRGPSTEYGFYHDFFLGKERTIRGS 176

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           EL  +E+  QE+ A   PF +   S ++ R+LF  K   +K+ ++E        T+Y  G
Sbjct: 177 ELPVLERICQELTAAARPFRRLEASRDQLRQLF--KDNPFKLHLIEEKVTGPTATVYGCG 234

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
              DLC+GPH+R TGQ+     L   +  +         L R+ G ++ T + L  +  +
Sbjct: 235 TLVDLCQGPHLRHTGQIGGLKLLSNSSSLWRSSGPPE-TLQRVSGISFPTTELLRVWEAW 293

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
            EE+E RDHR++ +E +LF   E   G  F+  +G +++  L++++R +     + E+ T
Sbjct: 294 REEAELRDHRRIGKEQELFFFHELSPGSCFFLPRGTRVYNALVAFIRAEYAHRGFSEVKT 353

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKC----------ADDTIKDLR-TFALKPMNCPGHV 345
           P +    LW+QSGHW+ Y+ +MFAV+           +DD+ + +  T ALKPMNCP H 
Sbjct: 354 PTLFSTKLWEQSGHWEHYQEDMFAVQPPGSDRPPSSQSDDSTRHITDTLALKPMNCPAHC 413

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +F H  +S+RELP+RLA+FG+++R E SG L GL R+R F QDDAH+FCT +Q+  E  
Sbjct: 414 LMFAHRPRSWRELPLRLADFGALHRAEASGGLGGLTRLRCFQQDDAHIFCTTDQLEAEIQ 473

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
              + + S+Y   GF    + LSTRP   +G   LWD AE ++K  L          +N+
Sbjct: 474 SCLDFLRSVYAVLGF-SFRLALSTRPSGFLGDPCLWDQAEQVLKQALKEFGEPWD--LNS 530

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
           G    +GAFYGPK +  L DA+GR  QCGTIQ+DF LP RF+  Y         PV+IHR
Sbjct: 531 G----DGAFYGPKIDVHLHDALGRPHQCGTIQLDFQLPLRFDLQYKGQAGALGRPVLIHR 586

Query: 526 AVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD 585
           AV GS+ER +G++ E+  G  PLWLSP Q +V  + S   EYA+E    L++  L  + D
Sbjct: 587 AVLGSVERLLGVLAESCGGKWPLWLSPFQVVVIPVGSEQEEYAKEAQQSLRAAGLVSDLD 646

Query: 586 FRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
             +  T++ +IR   +       + G KE S+R++ IR
Sbjct: 647 ADSGLTLSRRIRRAQLAHYNFQFVVGQKEQSKRTVNIR 684


>gi|154508918|ref|ZP_02044560.1| hypothetical protein ACTODO_01429 [Actinomyces odontolyticus ATCC
           17982]
 gi|153798552|gb|EDN80972.1| hypothetical protein ACTODO_01429 [Actinomyces odontolyticus ATCC
           17982]
          Length = 677

 Score =  404 bits (1037), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 239/673 (35%), Positives = 355/673 (52%), Gaps = 47/673 (6%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
           MP DI L   DG  +  P   TG+   E      ++  VA+ ++G   DL  P   G+ +
Sbjct: 1   MP-DISLVI-DGHEQTVPAGTTGTTWFEK-----SRDVVAIKVDGTPRDLETPFEAGTTV 53

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           E IT      L ++RHS  H++A+AVQ ++P+V + IGP I DGFYYDF      + + L
Sbjct: 54  EAITLASEDGLNILRHSATHLLAQAVQDVFPDVNLGIGPFITDGFYYDFGNIDAVTPELL 113

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIP----------AKE 169
             +EK+M+ I+     F+++ +S E+A    E  ++ YK+E++ +               
Sbjct: 114 RDLEKRMKRIVKEGQRFVRREISEEEAVV--ELAEQPYKLELVTTKGKGAEGASVEVGGG 171

Query: 170 NVTLY----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
            +T+Y    R G   W DLCRGPH+ ST  +   F L K + AYW+GD     L RIYGT
Sbjct: 172 TLTMYDNVRRDGSVAWKDLCRGPHLPSTKLIGNGFALTKASAAYWKGDQAGDQLQRIYGT 231

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISY 282
           AW ++ +L  Y   ++E+E+RDHR+L  E+DL+   E+ G G++ +H KG  +   + SY
Sbjct: 232 AWASKDDLVAYQERIKEAERRDHRRLGAELDLYSFPEEIGPGLVVFHPKGGILRHEIESY 291

Query: 283 MRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD-------DTIKDLRTF 334
           +  + K   ++ ++TP++    L+  SGH   Y   MF     D       +  K  + +
Sbjct: 292 VTDRHKAAGFDFVHTPEISKGGLFHTSGHLPYYADTMFPPMLVDEERDEDGNVTKAGQEY 351

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
            LK MNCP H  +F    +SYRELP+R  E G  YR E SG +HGL R+RGFTQDD+H +
Sbjct: 352 YLKAMNCPMHNLIFRSRGRSYRELPLRFYELGHDYRYEKSGVVHGLTRMRGFTQDDSHTY 411

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE------KRVGSDALWDDAENIM 448
           CT EQ   E        +SI   FG +   ++LSTR E      K +GSD  W  A    
Sbjct: 412 CTPEQASEEIRTQIEFFLSILSAFGLKDFYLELSTRDEDGKKKDKFIGSDEDWAAA---T 468

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
           K + D    +  D +      G  AFYGPK    +KDAIGR WQ  TIQ DFN P RF+ 
Sbjct: 469 KALEDACAATGLDLVPD---PGGAAFYGPKVSVQVKDAIGRTWQMSTIQYDFNQPDRFDL 525

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYA 568
            Y  +   +  PVMIH A  GS+ERFIG++ E++ G  P WLSP+Q  +  +  +   Y 
Sbjct: 526 EYTAADGSRQRPVMIHSAKLGSVERFIGVLTEHYAGAFPAWLSPVQVRLIPVAEAFDGYV 585

Query: 569 QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
           +++A  L+   + +ETD  ++    KIR  S  KIP  +I G ++    ++  R    + 
Sbjct: 586 KDVAAKLRERGVRVETDLSDDRFGKKIRNASKDKIPFTLIAGGEDVEAGAVSFRLRDGSQ 645

Query: 629 TQKVSLLDAIPIL 641
              V++  A+ ++
Sbjct: 646 HNGVAVDRAVELI 658


>gi|160943529|ref|ZP_02090762.1| hypothetical protein FAEPRAM212_01020 [Faecalibacterium prausnitzii
           M21/2]
 gi|158445208|gb|EDP22211.1| hypothetical protein FAEPRAM212_01020 [Faecalibacterium prausnitzii
           M21/2]
 gi|295103777|emb|CBL01321.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Faecalibacterium
           prausnitzii SL3/3]
          Length = 594

 Score =  404 bits (1037), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 218/591 (36%), Positives = 347/591 (58%), Gaps = 26/591 (4%)

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQI 122
           P+D + L VIRH+ AH+MA+A++ ++P+   A GP  E+GFYYD D  +Q  S ++LA I
Sbjct: 14  PQD-QELHVIRHTAAHVMAQAIKRLYPQADFAFGPATENGFYYDVDLGDQKLSDEDLANI 72

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M++I+  + P     L   +A +L E ++E YKVE +  +  +   + ++QGE+ D+
Sbjct: 73  EKEMRKIVKENLPIKPFILPRAEAEKLMEERQEHYKVEHMADLADETEFSFFQQGEYVDM 132

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPH+  T  +K F K+ + +GAYW+ D    ML+RI G A+  Q+EL  +    +E+ 
Sbjct: 133 CIGPHLTYTKALKAF-KITQQSGAYWKNDKENKMLTRINGVAFRNQEELDAWEKEQQEAR 191

Query: 243 KRDHRKLAREMDLFHIAED--GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQV 299
           +RDHRK+ +EM LF + +D  G G+  +   G+ ++Q L +Y++ K +   Y  + TP +
Sbjct: 192 ERDHRKIGKEMGLF-MTDDLVGRGLPMFLPAGYTVWQELENYIKEKERARGYLHVMTPCI 250

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
              +L++ SGHWD YR NMF     +       ++ L+PMNCP H+ ++ +   SYR+LP
Sbjct: 251 GTVNLYKTSGHWDHYRENMFPAMEMEG-----ESYVLRPMNCPHHMMIYANRPHSYRDLP 305

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+ E    +R E SG+L G+ R R F Q+DAH+FCT EQ+ +E   + +LI  +YKDF 
Sbjct: 306 MRIGEIAHDFRYESSGTLKGIERGRHFCQNDAHLFCTPEQIKSEVANVCDLIFEVYKDFN 365

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                  LS R     +K    DA+W+ AE  ++ VL  +       I+    +GE AFY
Sbjct: 366 ITDYRCVLSLRDPADKKKYHDDDAMWNHAEQALREVLTELG------IHFTEEIGEAAFY 419

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G ++   T Q+DF LP++F+  YV+    +  PV++HRA+ GS++RF+
Sbjct: 420 GPKLDVNVKPAVGAEYTLSTCQLDFCLPAKFHLTYVDKDGSEKTPVVLHRAILGSLDRFM 479

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
             +IE  KG  P WL+P Q  V  ++   +EYAQ++   L    + +  D  N+ I YKI
Sbjct: 480 AYLIEETKGKFPTWLAPTQVKVLPVSEKTLEYAQDVTEKLSDAGIRVVLDDDNQKIGYKI 539

Query: 596 R-EHSIKKIPIIIICGDKEASERSIGIR-RFGSTTTQKVSLLDAIPILTKE 644
           R    + ++P +++ G KEA   +I +R R G T   ++SL D I  +T E
Sbjct: 540 RAAQQVDRVPYMLVLGAKEAEAGNISVRDRKGETA--EMSLEDFIAKVTTE 588


>gi|153217256|ref|ZP_01951020.1| threonyl-tRNA synthetase [Vibrio cholerae 1587]
 gi|124113711|gb|EAY32531.1| threonyl-tRNA synthetase [Vibrio cholerae 1587]
          Length = 410

 Score =  404 bits (1037), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 191/413 (46%), Positives = 282/413 (68%), Gaps = 11/413 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS ++F    +  +VA+SI   LAK  +A  +NG   D  D +  + S+EIIT +
Sbjct: 4   ITLPDGSQRHFDNPVSTLEVAQSIGPGLAKATIAGRVNGVRVDACDLIEHDASLEIITTK 63

Query: 66  DP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  A++ ++P  ++AIGP I+ GFYYD D EQ  S ++L +IE 
Sbjct: 64  DEIDGLEIVRHSCAHLLGHALKQLYPNAKMAIGPTIDSGFYYDIDLEQSLSQEDLEKIEA 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLC 183
           +M E+       +K+ +S ++AR+ FES+ E+YK+EIL E++   +   LY   E+ D+C
Sbjct: 124 RMVELAKTKYAVVKKKVSWQEARDTFESRGESYKMEILDENVARDDRPGLYHHEEYIDMC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV   G  + F KL+ +AGAYWRG+S+  ML RIYGTA++ ++ L  +L  LEE+ K
Sbjct: 184 RGPHVPHMGFCQNF-KLLNIAGAYWRGNSDNKMLQRIYGTAFHDKKALQAHLTRLEEAAK 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRK+ +++DLFH+ ++  G++FWH  GW IF+ L  ++R+K+ +  Y+E+  P ++D+
Sbjct: 243 RDHRKIGKQLDLFHMQQEAPGMVFWHHNGWSIFRDLEIFIRQKLNEYGYQEVKGPLMMDR 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y   MF       T  + R +A+KPMNCPGH+ +FN GLKSYR+LP+R+
Sbjct: 303 VLWERSGHWDKYADAMFT------TSSENREYAIKPMNCPGHIQIFNQGLKSYRDLPLRM 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           AEFGS +RNEPSGSLHG+MRVRGFTQDDAH+FCT++Q+  E      ++   Y
Sbjct: 357 AEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTEDQIQQEVTSCIKMVYDTY 409


>gi|67605980|ref|XP_666722.1| threonyl-tRNA synthetase [Cryptosporidium hominis TU502]
 gi|54657772|gb|EAL36495.1| threonyl-tRNA synthetase [Cryptosporidium hominis]
          Length = 763

 Score =  404 bits (1037), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 230/625 (36%), Positives = 346/625 (55%), Gaps = 49/625 (7%)

Query: 46  KVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGF 104
           ++ D + P+  +  +EI+T +      V  HS +HI+ + +++ +   QV IGP +  GF
Sbjct: 136 RLWDATRPLEGDCELEILTFDSLEGSGVFWHSSSHILGQCLENEYG-AQVTIGPALNPGF 194

Query: 105 YYD-FDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVE-IL 162
           YYD +      S+ E + IE   + II+    F +   + E+A ELF  K   +KV  I+
Sbjct: 195 YYDSYMGTHSVSNTEYSDIENCAKTIISEKQQFERLQCNKEEALELF--KDNPFKVSLIM 252

Query: 163 ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYG 222
             IP     T+YR G + DLC GPH+  TG VK F K+ K +G  W G++    L R+YG
Sbjct: 253 SKIPDGAQTTIYRCGSFVDLCTGPHIPHTGIVKAF-KVTKNSGCNWLGNTENDALQRVYG 311

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLIS 281
            ++  ++ L +YL  LEE++KRDHR L   + LF    + S G  FW   G +++  L+ 
Sbjct: 312 VSFPDKKRLDEYLNMLEEAKKRDHRLLGSNLQLFFFDSNVSPGSCFWLPAGARLYNKLMD 371

Query: 282 YMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
           ++R + +  ++ E+ TP +    LW+ SGH+ +Y+ NMF     +      + + LKPMN
Sbjct: 372 FIRSEYRIREFTEVITPNIFSCDLWKTSGHYFAYKENMFIFDVEE------KEWGLKPMN 425

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
           CPGH  +F H   SYR+LP+RLA+FG ++RNE SG+L+GL RVR F QDDAH+FCT EQ+
Sbjct: 426 CPGHCVMFKHMNPSYRQLPIRLADFGVLHRNEFSGALNGLTRVRRFQQDDAHIFCTPEQI 485

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQ 460
             E  K  + +  IY   GF   +  LST P++ +G++  W +AEN +K  LD  K    
Sbjct: 486 QEEVFKALDFLFFIYGQLGFTFDLF-LSTMPKEHLGTEEQWKEAENALKSALD--KTGRD 542

Query: 461 DRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFY---------- 510
            ++N     G+GAFYGPK + +L DA+ R  QCGTIQ+DF LP RFN  Y          
Sbjct: 543 WKLNP----GDGAFYGPKIDIMLWDALKRQHQCGTIQLDFQLPIRFNLQYRTDENISEES 598

Query: 511 VNSHSEKCH-----------------PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI 553
            N      H                 PV+IHRA+ GS+ER   +++E+  G LP WLSP 
Sbjct: 599 TNQEQPPSHQNADQNPDNSLKQGYKRPVIIHRAILGSVERMSAVILEHTGGKLPFWLSPR 658

Query: 554 QAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
           QAIV +I+   VEYA+ +   L      +  D+   TIN KIRE  + +   +++ G+ E
Sbjct: 659 QAIVLSISEKTVEYAKSVERELSRRGFDVSGDYSAATINKKIRESQLLQWNYMLVIGENE 718

Query: 614 ASERSIGIRRFGSTTTQKVSLLDAI 638
           A ++ + +R   +T  Q++  LD +
Sbjct: 719 ARDKKVTLRCRDTTIPQELLTLDQL 743


>gi|194246566|ref|YP_002004205.1| Threonyl-tRNA synthetase [Candidatus Phytoplasma mali]
 gi|254783531|sp|B3R0I8|SYT_PHYMT RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|193806923|emb|CAP18352.1| Threonyl-tRNA synthetase [Candidatus Phytoplasma mali]
          Length = 640

 Score =  404 bits (1037), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 222/632 (35%), Positives = 371/632 (58%), Gaps = 29/632 (4%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKK---AVAVAINGKVCDLSDPVRE-GSIE 60
           IK+   +G  + F   + G+DV   I + L K    AVA   N K+ +L+ P++E G++E
Sbjct: 2   IKIKLKNGLEEYF---SCGTDVLTIIKKYLKKSEKTAVAAFFNQKLIELNTPLKEDGTLE 58

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDEL 119
           II  +   SL ++ H+ +H+M  A+   +P +    G   E+GFYYD D +E   S+ + 
Sbjct: 59  IINFKHIESLKMLNHTTSHLMLHALSIKYPNILPTSGNFNEEGFYYDIDFQEHKISNHDF 118

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM +I  +    LK+  ++E+A E+F  K   YK E+L+    K+ + +Y+QG++
Sbjct: 119 DSIEKKMHQIAEKKLDILKKEFTYEQALEIF--KNNHYKKELLQENKNKK-INIYKQGDF 175

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLC   H+ +T  +K +FKL+K++GAY++G+SNR  + RIYGT++  + +L  +L  L+
Sbjct: 176 IDLCSDLHIINTKLIK-YFKLLKISGAYFKGNSNRKQIIRIYGTSFFNRNDLNNHLKILQ 234

Query: 240 ESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTP 297
           E +  DH+ + ++++ F ++++ G G+ FW  KG  I + +  Y+  +++   YE + TP
Sbjct: 235 ERKMSDHKYINKDLNFFMLSQEVGLGLPFWLSKGSTIRRIIERYIVDKELIGGYEHVYTP 294

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + + +++  SGH + YR NMF      +  K    + L+PMNCP H+ ++ + + SY+E
Sbjct: 295 VIANINIYSTSGHLEHYRDNMFPAMNMPNGEK----YVLRPMNCPHHMMIYKNKIYSYKE 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AE G ++R E SG++ GL RVR  T +DAH+F   +Q+  E  KI N I  +Y+D
Sbjct: 351 LPIRIAELGMMHRLEKSGAVSGLERVREMTLNDAHIFIRTDQIKEEFKKIVNFIQEVYRD 410

Query: 418 FGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           F     + +LS R     +K    D +W+ AENI+K ++  +K      +N   + GE A
Sbjct: 411 FDINNYIFRLSYRDPLDKKKYFNDDEMWNKAENILKEIMLELK------LNFTEVQGEAA 464

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  +  A+G +    ++Q+DF LP RFN  YV    +K  P++IHR +  ++ER
Sbjct: 465 FYGPKLDVQVLTALGHEETLSSVQIDFLLPKRFNLTYVGEDGKKYSPILIHRCIVSTMER 524

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
           F   ++E +KG  P WL+P+Q I+  I   + + YAQ+I ++L  +   +E + ++ T++
Sbjct: 525 FFSYLLERYKGFFPFWLAPLQVILIPINLDNHLIYAQKIKSILLKNGFRVEINQKDSTLS 584

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRF 624
           YKIRE    KIP  I+ GDKE  +  I  R +
Sbjct: 585 YKIREAQKWKIPYQIVIGDKEIKDDIITFREY 616


>gi|196000905|ref|XP_002110320.1| hypothetical protein TRIADDRAFT_22327 [Trichoplax adhaerens]
 gi|190586271|gb|EDV26324.1| hypothetical protein TRIADDRAFT_22327 [Trichoplax adhaerens]
          Length = 603

 Score =  404 bits (1037), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 220/599 (36%), Positives = 349/599 (58%), Gaps = 23/599 (3%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT-PEDPRSLAVIRHSCA 78
            T  +VA++IS+ L+K+ V   ++  + DL  P+  + S++++   +DP +  V  HS +
Sbjct: 18  TTPLEVAQAISKQLSKEVVVAVVDNSIWDLQAPLTNDCSLKLLKFRDDPLAKQVFWHSSS 77

Query: 79  HIMAEAVQSIWPE---VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSP 135
           H++  A++ ++     VQ+  GP +E G              +L ++EK   +++  +  
Sbjct: 78  HLLGYAMEKLYGSEVPVQLCNGPPLEQG-------NVSLPEGDLNKLEKIAVDLVKENLS 130

Query: 136 FLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVK 195
           F +  L+   A E+F  +   YK+EI++ +   + +T Y+ G++ DLCRGPH+  TG +K
Sbjct: 131 FERIELTINAALEMF--RYNPYKIEIIKKLDPGDTITAYKCGDFIDLCRGPHLPRTGMIK 188

Query: 196 KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDL 255
               + K +  +  GD++   L R+YG A+  +  L  +L   +E+++RDHR + ++  L
Sbjct: 189 AI-AMTKESSVHKSGDTSSAQLQRVYGIAFPKKDLLKDWLKMQQEAKERDHRTIGKDQKL 247

Query: 256 FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSY 314
           F       G  F    G +I   L ++++ + +   Y E+ TP   +Q LW QSGHWD Y
Sbjct: 248 FFFNPLSPGNAFLLPHGLRIINKLKNFLKDEYRVRGYHEVETPLTFNQELWVQSGHWDHY 307

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
             +MF ++      ++  + +LKPMNCPGH  +F +   SYR+LPVRLAEF +++R+EPS
Sbjct: 308 SDDMFRLQSDPQDHENRGSISLKPMNCPGHCLIFGNERHSYRDLPVRLAEFSALHRDEPS 367

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
           GSL GL R+R F QDDAH+FCTK+Q+  E     +LI   Y  F F   M KLSTRPE  
Sbjct: 368 GSLGGLTRLRQFHQDDAHIFCTKDQIGEEVQDCLDLINKAYSIFDFNYTM-KLSTRPEGY 426

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           +G  A+W++AEN +  +L++     +  +N     G+GAFYGPK + +++DAIGR  Q  
Sbjct: 427 LGETAVWEEAENRLVNILNS--TGKEWSVND----GDGAFYGPKIDVMIQDAIGRSHQTA 480

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQ 554
           TIQ+DF LP RFN  ++NS  E  HPV+IHRA+FGS ERF+GI+IE+  GN P W+SP Q
Sbjct: 481 TIQLDFQLPKRFNLQFMNSSGELEHPVIIHRAIFGSFERFLGILIEHTAGNWPFWISPRQ 540

Query: 555 AIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
             V +++    +YA+EI + LK + L  + D  +  +N KIR   +     I + G +E
Sbjct: 541 VSVCSVSERHNDYAREICDSLKINGLYADLDITDVVLNRKIRLSRLAGYNYIAVVGKEE 599


>gi|258568114|ref|XP_002584801.1| threonyl-tRNA synthetase [Uncinocarpus reesii 1704]
 gi|237906247|gb|EEP80648.1| threonyl-tRNA synthetase [Uncinocarpus reesii 1704]
          Length = 756

 Score =  403 bits (1036), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 226/658 (34%), Positives = 353/658 (53%), Gaps = 56/658 (8%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGK-VCDLSDPV-REGSIEIITPEDPRSLAVIRHSCA 78
           +T     + I +  +   V   ++GK + DL  P+ R+  +  +  + P    V  HS A
Sbjct: 97  STPGSFLKDIPKEFSSNVVIAKLDGKQLWDLDRPLERDCRVSYLPFDSPEGREVFWHSSA 156

Query: 79  HIMAEAVQSIWPEVQVAIGPIIEDGFYYD--FDKEQPFSSDELAQIEKKMQEIIARDSPF 136
           H++ EA +  +    ++ GP    GF+YD            +   ++ +  +I      F
Sbjct: 157 HVLGEAAECEY-GCMLSHGPPTAQGFFYDMALPNNGVVKESDWPSLDSRSSKIFKEKQSF 215

Query: 137 LKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKK 196
            +  +S E  +++F   K  YK+  + ++   E+ T+YR G   DLCRGPH++STG++K 
Sbjct: 216 DRLEVSKEDLKKMFSYSK--YKMHYINNLVEGESSTVYRCGTLVDLCRGPHIQSTGKIKA 273

Query: 197 FFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLF 256
             K+M+ + AY+ GD +   L RI G A+  ++ L  +L FLEE+EKR+H K+ +E +LF
Sbjct: 274 M-KIMQNSSAYFLGDQSNDSLQRIRGVAFPDKKSLQGHLKFLEEAEKRNHLKIGKEQELF 332

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYR 315
              E   G  F    G KIF +L   +R +  K  Y+E+ +P + D  LW+ SGHW+ Y+
Sbjct: 333 FFDEVSPGCPFLLPNGTKIFNSLQKLLRTEYRKRGYQEVQSPNMYDVGLWRTSGHWNHYK 392

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            +MF +        + R +ALKPMNCPGH  +FNH  +SYRELP+R+A+FG ++RNE SG
Sbjct: 393 DDMFKLAV------EKREWALKPMNCPGHCIMFNHRERSYRELPLRMADFGVLHRNEASG 446

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
           +LHGL RVR F QDD H+FCT++Q+  E   + + + +IY  FGF    +KLSTRPEK +
Sbjct: 447 ALHGLTRVRKFQQDDTHIFCTEDQITQEIEGLFDFLRAIYGLFGFS-FKLKLSTRPEKYL 505

Query: 436 GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGT 495
           G    W+ AE  +K  L   K S  +     +  G+GAFYGPK +  ++DA+ R++QC T
Sbjct: 506 GKLETWNFAEAQLKEALTRFKGSDWE-----IDEGDGAFYGPKIDITIQDALKREFQCAT 560

Query: 496 IQVDFNLPSRFNAFYVNSHS---------------------------------EKCHPVM 522
           IQ+D+ LP  F   Y+ + +                                  +  PVM
Sbjct: 561 IQLDYQLPQNFKLEYMTNETGRPKATDAKKDETSPKGDDDNPSPDSDDGTPGPGRARPVM 620

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSI 582
           IHRA+ GS ERF GI+IE+F G  P WLSP Q ++  +  +  +Y +E+  +L+   L++
Sbjct: 621 IHRAIIGSFERFFGILIEHFGGKWPFWLSPRQILIVPVMPAVYDYVEELQGILRGDKLNV 680

Query: 583 ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
           + D    T+  KIR   + +   I + G +E   R++ IR     ++Q    L  IP+
Sbjct: 681 DIDVSGNTLQKKIRNGQLAQYNFIFVVGAQEKETRTVNIRNRDDPSSQAKGSL--IPL 736


>gi|302816171|ref|XP_002989765.1| hypothetical protein SELMODRAFT_130418 [Selaginella moellendorffii]
 gi|300142542|gb|EFJ09242.1| hypothetical protein SELMODRAFT_130418 [Selaginella moellendorffii]
          Length = 647

 Score =  403 bits (1036), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 218/617 (35%), Positives = 343/617 (55%), Gaps = 29/617 (4%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIEIIT 63
           D ++ +P   +   P+     D+A  IS+  A   V   +NG + D+  P+ E    ++ 
Sbjct: 40  DGEVVYPGRRLLTTPL-----DIARLISKKKAADYVIAQVNGTLWDMGRPLEEDCTLVLY 94

Query: 64  P-EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE--DGFYYD--FDKEQPFSSDE 118
             +D +      HS AHI+ E+++  +   ++ IGP     +GFYYD  ++  +  + + 
Sbjct: 95  AFKDEQGRDTFWHSSAHILGESLEQAYG-CKLCIGPCTTRGEGFYYDAFYEDGRTLNEEN 153

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
              ++ ++ + +    PF +  ++ ++A E+F   +  +KVEI+  +P    +T+YR G 
Sbjct: 154 FPAVQSQVTKAVQESQPFERIQVTRQQALEIFSDNQ--FKVEIINDLPEDAVITVYRCGP 211

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLCRGPH+ +T  VK F   +K +  YW+G   R  L R+YG ++   Q L  Y+   
Sbjct: 212 LVDLCRGPHIPNTSYVKAF-SCLKASACYWKGKQERESLQRVYGISYPDNQSLKAYMTKY 270

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
           EE++KRDHR L +   LF   E   G  F+  KG  ++  L+ ++R +  K  ++E+ TP
Sbjct: 271 EEAKKRDHRLLGKNQQLFFFHELSPGSAFFLPKGTIVYNKLLQFIRSEYRKRGFDEVVTP 330

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  LW+QSGH   Y+ NMF  +       + + F LKPMNCPGH  +F H ++SYRE
Sbjct: 331 NIYNMKLWEQSGHAAHYKENMFVFEI------EKQEFGLKPMNCPGHCLLFQHRVRSYRE 384

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+A+FG ++RNE SG+L GL RVR F+QDDAH+FC + Q+++E     + +  +Y  
Sbjct: 385 LPLRIADFGVLHRNELSGALTGLTRVRRFSQDDAHIFCMESQVYDEVKGCLDFLDYVYTI 444

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF    +KLSTRPE  +G  +LWD AE  +   L+      Q  +N     G+GAFYGP
Sbjct: 445 FGF-TYDLKLSTRPENFLGESSLWDRAEGALADALNAHAKPWQ--MNE----GDGAFYGP 497

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC-HPVMIHRAVFGSIERFIG 536
           K +  + DA+ R +QC TIQ+DF  P RF   Y      K   PV+IHRA+ GSIER   
Sbjct: 498 KIDIQVSDALNRKFQCATIQLDFQSPIRFKLSYSAEDEAKIERPVIIHRAILGSIERMFA 557

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           I++E+  G  P WLSP QAIV TI+    +YA+E+   L +    ++ D  +  ++ K+R
Sbjct: 558 ILLEDNAGKWPFWLSPRQAIVLTISEKFKDYAEEVRAKLHAAGFEVDVDVSDRKVDKKVR 617

Query: 597 EHSIKKIPIIIICGDKE 613
           E  +     +++ G  E
Sbjct: 618 EAQMAHYNYLLVVGAME 634


>gi|295664831|ref|XP_002792967.1| threonyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
 gi|226278488|gb|EEH34054.1| threonyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
          Length = 764

 Score =  403 bits (1036), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 224/640 (35%), Positives = 353/640 (55%), Gaps = 53/640 (8%)

Query: 25  DVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIRHSCAHIMAE 83
           D+ + IS ++    VA   + ++ DL  P+ R+  +  +  +      V  HS AH++ E
Sbjct: 116 DIPKEISSTVV---VAKLDDKELWDLDRPLERDCRVSFLPFDSSEGREVFWHSSAHVLGE 172

Query: 84  AVQSIWPEVQVAIGPIIEDGFYYDFDKE--QPFSSDELAQIEKKMQEIIARDSPFLKQYL 141
           A +  +    ++ GP    GF+YD   E        +   ++ K   I     PF +  +
Sbjct: 173 ACECYY-GCLLSHGPPTPQGFFYDMALEPGHVVKESDWPALDSKSARIFKEKQPFDRLEV 231

Query: 142 SHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLM 201
           S E  +++F   K  YK+  + ++   E+ T+YR G   DLCRGPH+++TG++K   K+M
Sbjct: 232 SKENLKKMFAYSK--YKLHYINNLVEGESSTVYRCGTLVDLCRGPHIQNTGKIK-VMKIM 288

Query: 202 KVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED 261
           + + AY+ GD +   L RI G A+  ++++ ++L FLEE+EKR+H ++ +E DLF   E 
Sbjct: 289 QNSAAYFLGDQSNDTLQRIRGVAFPDKKQMQEHLKFLEEAEKRNHLRIGKEQDLFFFDEV 348

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
             G  F    G KI   L S +R +  K  Y+E+ +P + D  +W+QSGHW  Y+ +MF 
Sbjct: 349 SPGCPFLLPNGTKIINALQSLLRAEYRKRGYQEVQSPNMYDVGIWRQSGHWAHYKDDMFK 408

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +        + R +ALKPMNCPGH  +F H  +SYRELP+R+A+FG ++RNE SG+LHGL
Sbjct: 409 LDV------EKREWALKPMNCPGHAVMFGHRERSYRELPLRIADFGVLHRNEASGALHGL 462

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            RVR F QDD H+FCT++Q+  E   + + + S+Y  FGF    +KLSTRPEK +G    
Sbjct: 463 TRVRKFQQDDTHIFCTEDQIMQEIDGLFDFLRSVYGLFGF-SFKLKLSTRPEKYMGKLET 521

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDF 500
           W+ AE  ++  L   K +  +     V  G+GAFYGPK +  ++DA+ R++QC TIQ+D+
Sbjct: 522 WNYAEEQLRAALTKFKGNDWE-----VDEGDGAFYGPKIDITIQDALKREFQCATIQLDY 576

Query: 501 NLPSRFNAFYV--------------------------NSHSE----KCHPVMIHRAVFGS 530
            +P  F   Y+                          NS SE    +  PV+IHRA+ GS
Sbjct: 577 QMPVNFKLEYMTGETGAKAKPADKTTEDAANPDAPSTNSSSEPGPGRARPVVIHRAIIGS 636

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
            ERF+GI+IE+F G  P WLSP Q ++  +  +  +Y +E+  +L+   L+++ D    T
Sbjct: 637 FERFLGIIIEHFGGKWPFWLSPRQILIVPVMPAVNDYVEELREILRGDKLNVDIDISGNT 696

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
           +  KIR   I +   I + G +E + R++ IR     ++Q
Sbjct: 697 MQKKIRSGQIAQYNFIFVVGAQEKATRTVNIRNRDDPSSQ 736


>gi|319760484|ref|YP_004124422.1| threonyl-tRNA synthetase [Candidatus Blochmannia vafer str. BVAF]
 gi|318039198|gb|ADV33748.1| threonyl-tRNA synthetase [Candidatus Blochmannia vafer str. BVAF]
          Length = 411

 Score =  403 bits (1036), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 183/391 (46%), Positives = 269/391 (68%), Gaps = 19/391 (4%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
            ++ +K+DHR L+ ++DLFH  +D  G+IFWH+ GW IFQ L  ++R+K++   Y+E+ +
Sbjct: 5   FQQYKKKDHRTLSNQLDLFHTQDDAPGMIFWHKNGWIIFQELKKFIRKKLQQYQYQEVKS 64

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P ++DQ LW+++GHWD+Y  ++F       T  + RT+ +KPMNCPGH+ +FN+G+KSY+
Sbjct: 65  PIMIDQELWKKTGHWDNYYEHIFI------TASENRTYCIKPMNCPGHIQIFNYGIKSYK 118

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM---FNECLKIHNLIIS 413
           +LP+R+AEFG  +RNEPSGSLHGLMR+R FTQDDAH+FC+ EQ+    N C+K   ++  
Sbjct: 119 DLPLRIAEFGHCHRNEPSGSLHGLMRIREFTQDDAHIFCSIEQIPTELNYCIK---MMYD 175

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           +Y  FGF+KI+VKLSTRP KR+G D++WD  E  +  +L       +  I       +GA
Sbjct: 176 VYHTFGFKKIIVKLSTRPIKRIGEDSIWDITEQCLVHIL------QKKNIEFTYQPQDGA 229

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK E+IL D++ R WQCGT+Q+DF+LP    A Y++++++   PVMIHRA+ GSIER
Sbjct: 230 FYGPKIEFILLDSLKRAWQCGTVQLDFSLPKLLKAKYIDNNNKYQIPVMIHRAILGSIER 289

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           FIG++ E + G LP WL+P Q ++  +T +   Y   IAN LK  +  ++ D RNE I  
Sbjct: 290 FIGLITEEYSGFLPTWLAPTQIVLMNVTDAQSLYVTNIANRLKFENFRVQIDLRNEKIGC 349

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRF 624
           KIR H++ ++P +IICG+ E    +I IR F
Sbjct: 350 KIRLHTMHRVPYMIICGNSEVDHGTISIRTF 380


>gi|303390083|ref|XP_003073273.1| threonyl-tRNA synthetase [Encephalitozoon intestinalis ATCC 50506]
 gi|303302418|gb|ADM11913.1| threonyl-tRNA synthetase [Encephalitozoon intestinalis ATCC 50506]
          Length = 646

 Score =  403 bits (1035), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 228/614 (37%), Positives = 354/614 (57%), Gaps = 29/614 (4%)

Query: 36  KKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           K  ++  ING   D+   +  +  +E +T ED  +  +  HS AHI+  A+ +++P+ ++
Sbjct: 35  KDVISCKINGIYSDMVVEIPGDCELEFLTFEDNGAREIFWHSSAHILGNALVNLYPDAKL 94

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
             GP  E+GF+YD D +   SS++  +IE +M +I+ ++  F K   S E+    +  K 
Sbjct: 95  VHGPPTEEGFFYDVDIKDSISSEDYQKIEMEMLKIMKKNYRFEKVIKSKEELLNAY--KD 152

Query: 155 EAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNR 214
              K   ++    KE+ ++YR G++FD+C GPHV STG VK   K++K + AY+  D + 
Sbjct: 153 NPCKTHFIKKGVDKES-SVYRNGDFFDMCLGPHVLSTGVVKAV-KVLKNSSAYFLNDPSL 210

Query: 215 PMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWK 274
             L RIY   + +++ L +YL   EE+ +RDHRK+  E+DLF  ++   G  F+   G  
Sbjct: 211 KSLQRIYAITFPSKEMLQEYLKRKEEAMERDHRKIGTELDLFFFSKYSPGSCFFLPNGAI 270

Query: 275 IFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           ++ TLI ++R +  K  ++E+ TP +    LW++SGH  +Y+ NMF ++  +        
Sbjct: 271 MYNTLIEFLREEYRKRGFKEVITPNIFCTKLWEESGHLQNYKENMFLIEGDN-------- 322

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
           FALKPMNCPGH  +F H   S+R+LP+RLA+FG ++RNE SG+L GL RVR F QDDAH+
Sbjct: 323 FALKPMNCPGHCVMFKHQDHSFRDLPLRLADFGVLHRNELSGTLTGLTRVRRFQQDDAHI 382

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
           FCT++Q+  E       +  +Y  FGF K  + LSTRPEK +GS   W++AE ++   +D
Sbjct: 383 FCTRDQVKGEIKGCLEFLSFVYGVFGF-KFELVLSTRPEKYLGSIDEWNNAEKVLAEAMD 441

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS 513
             ++    +IN     G+GAFYGPK +  L DA+GR  QC TIQ+DF LP RF   Y +S
Sbjct: 442 --ESGMSFKINE----GDGAFYGPKIDITLHDALGRKIQCATIQLDFQLPQRFELKYRDS 495

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIAN 573
             +   PV+IHRA+ GSIER I I++E+F   LP W+SP Q  +  I    ++Y ++I +
Sbjct: 496 DGQCKTPVIIHRAILGSIERMIAIILESFGKKLPFWISPRQ--IAIINMGNLDYVEKIKS 553

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRF----GSTTT 629
           +L    L +  D    T+N +IR        ++ + G+KEA    I IR      G  + 
Sbjct: 554 VLSKFRLDVIDD--GNTMNKRIRTAETCGYSLVCVVGEKEAKTDEINIRLSKSGKGGKSN 611

Query: 630 QKVSLLDAIPILTK 643
           + + L +   IL +
Sbjct: 612 ENIGLYELRDILDR 625


>gi|302820128|ref|XP_002991732.1| hypothetical protein SELMODRAFT_134156 [Selaginella moellendorffii]
 gi|300140413|gb|EFJ07136.1| hypothetical protein SELMODRAFT_134156 [Selaginella moellendorffii]
          Length = 647

 Score =  403 bits (1035), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 218/617 (35%), Positives = 343/617 (55%), Gaps = 29/617 (4%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIEIIT 63
           D ++ +P   +   P+     D+A  IS+  A   V   +NG + D+  P+ E    ++ 
Sbjct: 40  DGEVVYPGRRLLTTPL-----DIARLISKKKAADYVIAQVNGTLWDMGRPLEEDCTLVLY 94

Query: 64  P-EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE--DGFYYD--FDKEQPFSSDE 118
             +D +      HS AHI+ E+++  +   ++ IGP     +GFYYD  ++  +  + + 
Sbjct: 95  AFKDEQGRDTFWHSSAHILGESLEQAYG-CKLCIGPCTTRGEGFYYDAFYEDGRTLNEEN 153

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
              ++ ++ + +    PF +  ++ ++A E+F   +  +KVEI+  +P    +T+YR G 
Sbjct: 154 FPAVQSQVTKAVQESQPFERIQVTRQQALEIFSDNQ--FKVEIINDLPEDAVITVYRCGP 211

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLCRGPH+ +T  VK F   +K +  YW+G   R  L R+YG ++   Q L  Y+   
Sbjct: 212 LVDLCRGPHIPNTSYVKAF-SCLKASACYWKGKQERESLQRVYGISYPDNQSLKAYMTKY 270

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
           EE++KRDHR L +   LF   E   G  F+  KG  ++  L+ ++R +  K  ++E+ TP
Sbjct: 271 EEAKKRDHRLLGKNQQLFFFHELSPGSAFFLPKGTIVYNKLLQFIRSEYRKRGFDEVVTP 330

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  LW+QSGH   Y+ NMF  +       + + F LKPMNCPGH  +F H ++SYRE
Sbjct: 331 NIYNMKLWEQSGHAAHYKENMFVFEI------EKQEFGLKPMNCPGHCLLFQHRVRSYRE 384

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+A+FG ++RNE SG+L GL RVR F+QDDAH+FC + Q+++E     + +  +Y  
Sbjct: 385 LPLRIADFGVLHRNELSGALTGLTRVRRFSQDDAHIFCMESQVYDEVKGCLDFLDYVYTI 444

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF   + KLSTRPE  +G  ALWD AE  +   L+      Q  +N     G+GAFYGP
Sbjct: 445 FGFTYDL-KLSTRPENFLGESALWDRAEGALADALNAHAKPWQ--MNE----GDGAFYGP 497

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH-PVMIHRAVFGSIERFIG 536
           K +  + DA+ R +QC TIQ+DF  P RF   Y      K   PV+IHRA+ GS+ER   
Sbjct: 498 KIDIQVSDALNRKFQCATIQLDFQSPIRFKLSYSAEDEAKIERPVIIHRAILGSVERMFA 557

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           I++E+  G  P WLSP QAIV TI+    +YA+E+   L +    ++ D  +  ++ K+R
Sbjct: 558 ILLEDNVGKWPFWLSPRQAIVLTISEKFKDYAEEVRAKLHAAGFEVDVDVSDRKVDKKVR 617

Query: 597 EHSIKKIPIIIICGDKE 613
           E  +     +++ G  E
Sbjct: 618 EAQMAHYNYLLVVGAME 634


>gi|39725443|emb|CAE45679.1| Threonyl-tRNA synthetase [Streptomyces parvulus]
          Length = 675

 Score =  403 bits (1035), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 224/611 (36%), Positives = 345/611 (56%), Gaps = 40/611 (6%)

Query: 44  NGKVCDLS-DPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIED 102
           +G + DL   P  +  +E +       L V+RHS AH++A+AVQ +WPE ++ IGP IE+
Sbjct: 47  SGALRDLDWTPDSDVEVEAVALSSEDGLTVLRHSTAHVLAQAVQQLWPEARLGIGPPIEN 106

Query: 103 GFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLK-QYLSHEKARELFESKKEAYKVEI 161
           GFYYDFD E+PF  ++L ++E++M+EII     F + ++   E AR   E  KE YK+E+
Sbjct: 107 GFYYDFDVERPFQPEDLERVEQRMKEIIKSGQRFCRREFPDREAARA--ELAKEPYKLEL 164

Query: 162 LE---SIPAKE-------NVTLY-----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVA 204
           ++    + A E       ++T+Y     R G+  W DLCRGPH+ ST  +  F KL++ A
Sbjct: 165 VDLKGDVDAAEAMEVGGSDLTIYDNLDARTGDVCWSDLCRGPHLPSTRLIPAF-KLLRNA 223

Query: 205 GAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI-AEDGS 263
            AYWRG    P L RIYGTAW T+ EL  +L  LEE+ KRDHR++  E+DLF    E G 
Sbjct: 224 AAYWRGSEKNPQLQRIYGTAWPTRDELKSHLAALEEAAKRDHRRIGEELDLFAFNKEIGR 283

Query: 264 GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK 322
           G+  W   G  I   L  + R+ + K  Y+ + TP +  + L+  SGH   Y  +++A  
Sbjct: 284 GLPLWLPNGAIIRDELEDWARKTERKLGYKRVVTPHITQEDLYYLSGHLPYYAEDLYAPI 343

Query: 323 CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMR 382
             D        + LKPMNCP H  V+     SYR+LP ++AE+G+VYR E SG LHG+MR
Sbjct: 344 DIDG-----EKYYLKPMNCPHHHMVYKARPHSYRDLPYKVAEYGTVYRFERSGQLHGMMR 398

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR----PEKRVGSD 438
            RGF+Q+DAH++CT +Q  ++ L++  +    Y+  G     + L+ R     +K    +
Sbjct: 399 TRGFSQNDAHIYCTADQAKDQFLEVMRMHADYYRTLGISDFYMVLALRDSANKDKYHDDE 458

Query: 439 ALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
            +W+DAE I +  ++      +  I   + LG  A YGPK +++++   G+++   T QV
Sbjct: 459 QMWEDAERITREAME------ESDIPFQIDLGGAAHYGPKVDFMIRAVTGKEFAASTNQV 512

Query: 499 DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVT 558
           D   P RF   Y +S   +   V+IHRA  GS ERF   + E+F G  P+WL+P Q  + 
Sbjct: 513 DLYTPQRFGLTYHDSDGTEKPVVVIHRAPLGSHERFTAYLTEHFAGAFPVWLAPEQVRII 572

Query: 559 TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERS 618
            I     +YA+E+ ++L    +  + D  +  +N K+R    +KIP++++ G +EA +R+
Sbjct: 573 PIVEELTDYAEEVRDMLLDADVRADVDAGDGRLNAKVRAAVTRKIPLVVVVGRREAEQRT 632

Query: 619 IGIR-RFGSTT 628
           + +R R G  T
Sbjct: 633 VTVRDRSGEET 643


>gi|261203861|ref|XP_002629144.1| threonyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
 gi|239586929|gb|EEQ69572.1| threonyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
          Length = 747

 Score =  402 bits (1034), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 223/652 (34%), Positives = 350/652 (53%), Gaps = 58/652 (8%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGK-VCDLSDPV-REGSIEIITPEDPRSLAVIRHSCA 78
            T       I + ++   V   ++GK + DL  P+ R+  +  +  +      V  HS A
Sbjct: 84  TTPGSFLRDIPKEISSTVVIAKLDGKELWDLDRPLERDCRVTFLPFDSVEGREVFWHSSA 143

Query: 79  HIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE--LAQIEKKMQEIIARDSPF 136
           H++ EA +  +    ++ GP    GF+YD   E      E     ++ K   I     PF
Sbjct: 144 HVLGEACECHY-GCLLSHGPPTPQGFFYDMALESGHVVKEGDWPALDAKAARIFKEKQPF 202

Query: 137 LKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKK 196
            +  +S E  +++F   K  YK+  + ++   E+ T+YR G   DLCRGPH++ TG++K 
Sbjct: 203 DRLEVSKEDLKKMFAYSK--YKLHYINNLVEGESSTVYRCGTLVDLCRGPHIQHTGKIK- 259

Query: 197 FFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLF 256
             K+M+ + AY+ GD +   L RI G A+  ++++ ++L FLEE+EKR+H ++ ++ DLF
Sbjct: 260 IMKIMQNSAAYFLGDQSNDALQRIRGVAFPDKKQMQEHLKFLEEAEKRNHLRIGKDQDLF 319

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYR 315
              E   G  F    G KIF  L   +R + +K  Y+E+ +P + D  +W+QSGHW  Y+
Sbjct: 320 FFDEVSPGCPFLLPNGTKIFNALQKLLRSEYLKRGYQEVQSPNMYDVGIWRQSGHWQHYK 379

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            +MF +        + RT+ALKPMNCPGH  +F H  +SYRELP+R+A+FG ++RNE SG
Sbjct: 380 DDMFKLDI------EKRTWALKPMNCPGHAIMFGHKERSYRELPIRMADFGVLHRNEASG 433

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
           +LHGL RVR F QDD H+FCT++Q+  E   + + + +IY  FGF    +KLSTRPEK +
Sbjct: 434 ALHGLTRVRKFQQDDTHIFCTEDQIMKEIDGLFDFLRAIYGLFGFS-FKLKLSTRPEKYM 492

Query: 436 GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGT 495
           G    W+ AE+ ++  L   K +  +     V  G+GAFYGPK +  ++DA+ R++QC T
Sbjct: 493 GKIETWNYAEDQLRAALTKFKGNDWE-----VEEGDGAFYGPKIDITIQDALKREFQCAT 547

Query: 496 IQVDFNLPSRFNAFYVNSHS-------------------------------------EKC 518
           IQ+D+ +P  F   Y+   +                                      + 
Sbjct: 548 IQLDYQMPVNFKLEYMTGETGAKAKPTEKPAENPDEKPAGDAAKPDAPPTNSDEPGPGRA 607

Query: 519 HPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSH 578
            PV+IHRA+ GS ERF GI+IE+F G  P WLSP Q ++  +  +  +Y +E+  +LK  
Sbjct: 608 RPVVIHRAIIGSFERFFGIIIEHFGGKWPFWLSPRQILIVPVMPAINDYVEELQQILKGD 667

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
            L+++ D    T+  KIR   I +   I + G +E S R++ IR     ++Q
Sbjct: 668 KLNVDIDISGNTMQKKIRTGQIAQYNFIFVVGAQEKSTRTVNIRNRDDPSSQ 719


>gi|66362768|ref|XP_628350.1| threonyl-tRNA synthetase (RNA binding domain TGS+HxxxH+tRNA
           synthetase) [Cryptosporidium parvum Iowa II]
 gi|46229397|gb|EAK90215.1| threonyl-tRNA synthetase (RNA binding domain TGS+HxxxH+tRNA
           synthetase) [Cryptosporidium parvum Iowa II]
          Length = 763

 Score =  402 bits (1034), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 230/625 (36%), Positives = 346/625 (55%), Gaps = 49/625 (7%)

Query: 46  KVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGF 104
           ++ D + P+  +  +EI+T +      V  HS +HI+ + +++ +   QV IGP +  GF
Sbjct: 136 RLWDATRPLEGDCELEILTFDSLEGSGVFWHSSSHILGQCLENEYG-AQVTIGPALNPGF 194

Query: 105 YYD-FDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVE-IL 162
           YYD +      S+ E + IE   + II+    F +   + E+A ELF  K   +KV  I+
Sbjct: 195 YYDSYMGTHSVSNTEYSDIENCAKTIISEKQQFERLQCNKEEALELF--KDNPFKVSLIM 252

Query: 163 ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYG 222
             IP     T+YR G + DLC GPH+  TG VK F K+ K +G  W G++    L R+YG
Sbjct: 253 SKIPDGAQTTIYRCGSFVDLCTGPHIPHTGIVKAF-KVTKNSGCNWLGNTENDALQRVYG 311

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLIS 281
            ++  ++ L +YL  LEE++KRDHR L   + LF    + S G  FW   G +++  L+ 
Sbjct: 312 VSFPDKKRLDEYLNMLEEAKKRDHRLLGSNLQLFFFDSNVSPGSCFWLPAGARLYNKLMD 371

Query: 282 YMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
           ++R + +  ++ E+ TP +    LW+ SGH+ +Y+ NMF     +      + + LKPMN
Sbjct: 372 FIRNEYRIREFTEVITPNIFSCDLWKTSGHYFAYKENMFIFDVEE------KEWGLKPMN 425

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
           CPGH  +F H   SYR+LP+RLA+FG ++RNE SG+L+GL RVR F QDDAH+FCT EQ+
Sbjct: 426 CPGHCVMFKHMNPSYRQLPIRLADFGVLHRNEFSGALNGLTRVRRFQQDDAHIFCTPEQI 485

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQ 460
             E  K  + +  IY   GF   +  LST P++ +G++  W +AEN +K  LD  K    
Sbjct: 486 QEEVFKALDFLFFIYGQLGFTFDLF-LSTMPKEHLGTEEQWKEAENALKSALD--KTGRD 542

Query: 461 DRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFY---------- 510
            ++N     G+GAFYGPK + +L DA+ R  QCGTIQ+DF LP RFN  Y          
Sbjct: 543 WKLNP----GDGAFYGPKIDIMLWDALKRQHQCGTIQLDFQLPIRFNLQYRTDENISEES 598

Query: 511 VNSHSEKCH-----------------PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI 553
            N      H                 PV+IHRA+ GS+ER   +++E+  G LP WLSP 
Sbjct: 599 TNQEQPPSHQNADQNPDNSLKQGYRRPVIIHRAILGSVERMSAVILEHTGGKLPFWLSPR 658

Query: 554 QAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
           QAIV +I+   VEYA+ +   L      +  D+   TIN KIRE  + +   +++ G+ E
Sbjct: 659 QAIVLSISEKTVEYAKSVERELCRRGFDVSGDYSAATINKKIRESQLLQWNYMLVIGENE 718

Query: 614 ASERSIGIRRFGSTTTQKVSLLDAI 638
           A ++ + +R   +T  Q++  LD +
Sbjct: 719 ARDKKVTLRCRDTTIPQELLTLDQL 743


>gi|239608840|gb|EEQ85827.1| threonyl-tRNA synthetase [Ajellomyces dermatitidis ER-3]
          Length = 747

 Score =  402 bits (1034), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 223/652 (34%), Positives = 350/652 (53%), Gaps = 58/652 (8%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGK-VCDLSDPV-REGSIEIITPEDPRSLAVIRHSCA 78
            T       I + ++   V   ++GK + DL  P+ R+  +  +  +      V  HS A
Sbjct: 84  TTPGSFLRDIPKEISSTVVIAKLDGKELWDLDRPLERDCRVTFLPFDSVEGREVFWHSSA 143

Query: 79  HIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE--LAQIEKKMQEIIARDSPF 136
           H++ EA +  +    ++ GP    GF+YD   E      E     ++ K   I     PF
Sbjct: 144 HVLGEACECHY-GCLLSHGPPTPQGFFYDMALESGHVVKEGDWPALDAKAARIFKEKQPF 202

Query: 137 LKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKK 196
            +  +S E  +++F   K  YK+  + ++   E+ T+YR G   DLCRGPH++ TG++K 
Sbjct: 203 DRLEVSKEDLKKMFAYSK--YKLHYINNLVEGESSTVYRCGTLVDLCRGPHIQHTGKIK- 259

Query: 197 FFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLF 256
             K+M+ + AY+ GD +   L RI G A+  ++++ ++L FLEE+EKR+H ++ ++ DLF
Sbjct: 260 IMKIMQNSAAYFLGDQSNDALQRIRGVAFPDKKQMQEHLKFLEEAEKRNHLRIGKDQDLF 319

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYR 315
              E   G  F    G KIF  L   +R + +K  Y+E+ +P + D  +W+QSGHW  Y+
Sbjct: 320 FFDEVSPGCPFLLPNGTKIFNALQKLLRSEYLKRGYQEVQSPNMYDVGIWRQSGHWQHYK 379

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            +MF +        + RT+ALKPMNCPGH  +F H  +SYRELP+R+A+FG ++RNE SG
Sbjct: 380 DDMFKLDI------EKRTWALKPMNCPGHAIMFGHKERSYRELPIRMADFGVLHRNEASG 433

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
           +LHGL RVR F QDD H+FCT++Q+  E   + + + +IY  FGF    +KLSTRPEK +
Sbjct: 434 ALHGLTRVRKFQQDDTHIFCTEDQIMKEIDGLFDFLRAIYGLFGF-SFKLKLSTRPEKYM 492

Query: 436 GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGT 495
           G    W+ AE+ ++  L   K +  +     V  G+GAFYGPK +  ++DA+ R++QC T
Sbjct: 493 GKIETWNYAEDQLRAALTKFKGNDWE-----VEEGDGAFYGPKIDITIQDALKREFQCAT 547

Query: 496 IQVDFNLPSRFNAFYVNSHS-------------------------------------EKC 518
           IQ+D+ +P  F   Y+   +                                      + 
Sbjct: 548 IQLDYQMPVNFKLEYMTGETGAKAKPTEKPAENPDEKPAGDAAKPDAPPTNSDEPGPGRA 607

Query: 519 HPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSH 578
            PV+IHRA+ GS ERF GI+IE+F G  P WLSP Q ++  +  +  +Y +E+  +LK  
Sbjct: 608 RPVVIHRAIIGSFERFFGIIIEHFGGKWPFWLSPRQILIVPVMPAINDYVEELQQILKGD 667

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
            L+++ D    T+  KIR   I +   I + G +E S R++ IR     ++Q
Sbjct: 668 KLNVDIDISGNTMQKKIRTGQIAQYNFIFVVGAQEKSTRTVNIRNRDDPSSQ 719


>gi|223938078|ref|ZP_03629976.1| threonyl-tRNA synthetase [bacterium Ellin514]
 gi|223893292|gb|EEF59755.1| threonyl-tRNA synthetase [bacterium Ellin514]
          Length = 618

 Score =  402 bits (1033), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 216/580 (37%), Positives = 336/580 (57%), Gaps = 31/580 (5%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           L  +RHSCAH++A A+  +WP+ Q A GP +E+GFYYD +     S ++  +IE +M++ 
Sbjct: 21  LERVRHSCAHVLATAILRLWPDAQFAAGPPVENGFYYDVELSHRISPEDFEKIEAEMKKE 80

Query: 130 IARDSPFLKQYLSHEKARELFESKKEA----------YKVEILESIPAKENVTLYRQGEW 179
              ++ F K  ++ E+A +  ++ + A          +K++I+++IP  E ++ Y+ G++
Sbjct: 81  TKANNTFEKVVVTREQAIKDAQTGRLAALGERGTPSKFKLDIVQNIPENEPISYYKNGDF 140

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLC GPHV  TG +  F KL  VA AY++GD   P L RIYGTA+  + E+  Y   LE
Sbjct: 141 LDLCAGPHVMRTGNIGAF-KLTHVASAYYKGDEKNPQLQRIYGTAFKNKTEMEAYFTMLE 199

Query: 240 ESEKRDHRKLAREMDLFHIAED--GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINT 296
           E++KRDHRK+ +EM LF I  +  G G+  W  KG  I + L +  +  +    Y  + T
Sbjct: 200 EAKKRDHRKIGQEMGLFAIDTEYVGPGLPLWLPKGTMIVEELENLAKETEFAAGYVRVKT 259

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAV----KCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           P +  + +++ SGH   Y  +MF      +   D+ ++   + LK MNCP H  +F    
Sbjct: 260 PHLAKEKMYKTSGHLPYYAESMFPPMELKEKGGDSNEEAERYYLKAMNCPHHHRIFAAEP 319

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
            SYR+LP+RLAE+G+ YR E SG L GLMRVR    +DAH++CT+EQ  +E   ++ + +
Sbjct: 320 HSYRDLPLRLAEYGTCYRYEQSGELFGLMRVRSLNMNDAHIYCTEEQFADEFNAVNEMYL 379

Query: 413 SIYKDFGFEKIMVKLSTRPEKRVGSD-----ALWDDAENIMKGVLDTIKNSSQDRINTGV 467
             +K FG EK  ++ ST   KR+G        LW   E++++ VL  +KN+    IN   
Sbjct: 380 KYFKIFGLEKYQMRFSTHDPKRLGDKFVNEPELWKKTEDMVRNVL--VKNN----INFVE 433

Query: 468 LLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAV 527
           +  E AFYGPK +  +  AIGR++   T QVDF +P++F   Y +  + +  P+ IHRA 
Sbjct: 434 VPNEAAFYGPKIDVQVWSAIGREFTIATNQVDFAVPAKFGLTYRDRDNTEKTPLCIHRAP 493

Query: 528 FGSIERFIGIMIENFKGNLPLWLSPIQAIVTTI--TSSAVEYAQEIANLLKSHHLSIETD 585
            G+ ERFIG +IE++ GN PLWL+P Q  V TI    + V YA+ IAN L+++ +  ETD
Sbjct: 494 LGTHERFIGFLIEHYAGNFPLWLAPDQVRVLTIGDDEALVNYAKLIANELRANMVRCETD 553

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
           FR + I  KI E    K+  +++ G ++    ++ +R  G
Sbjct: 554 FRTDPIKAKIAEAEQTKVHTMLVIGPRDMEAGNVSVRLHG 593


>gi|327356150|gb|EGE85007.1| threonyl-tRNA synthetase [Ajellomyces dermatitidis ATCC 18188]
          Length = 770

 Score =  402 bits (1033), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 223/652 (34%), Positives = 350/652 (53%), Gaps = 58/652 (8%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGK-VCDLSDPV-REGSIEIITPEDPRSLAVIRHSCA 78
            T       I + ++   V   ++GK + DL  P+ R+  +  +  +      V  HS A
Sbjct: 107 TTPGSFLRDIPKEISSTVVIAKLDGKELWDLDRPLERDCRVTFLPFDSVEGREVFWHSSA 166

Query: 79  HIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE--LAQIEKKMQEIIARDSPF 136
           H++ EA +  +    ++ GP    GF+YD   E      E     ++ K   I     PF
Sbjct: 167 HVLGEACECHY-GCLLSHGPPTPQGFFYDMALESGHVVKEGDWPALDAKAARIFKEKQPF 225

Query: 137 LKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKK 196
            +  +S E  +++F   K  YK+  + ++   E+ T+YR G   DLCRGPH++ TG++K 
Sbjct: 226 DRLEVSKEDLKKMFAYSK--YKLHYINNLVEGESSTVYRCGTLVDLCRGPHIQHTGKIK- 282

Query: 197 FFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLF 256
             K+M+ + AY+ GD +   L RI G A+  ++++ ++L FLEE+EKR+H ++ ++ DLF
Sbjct: 283 IMKIMQNSAAYFLGDQSNDALQRIRGVAFPDKKQMQEHLKFLEEAEKRNHLRIGKDQDLF 342

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYR 315
              E   G  F    G KIF  L   +R + +K  Y+E+ +P + D  +W+QSGHW  Y+
Sbjct: 343 FFDEVSPGCPFLLPNGTKIFNALQKLLRSEYLKRGYQEVQSPNMYDVGIWRQSGHWQHYK 402

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            +MF +        + RT+ALKPMNCPGH  +F H  +SYRELP+R+A+FG ++RNE SG
Sbjct: 403 DDMFKLDI------EKRTWALKPMNCPGHAIMFGHKERSYRELPIRMADFGVLHRNEASG 456

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
           +LHGL RVR F QDD H+FCT++Q+  E   + + + +IY  FGF    +KLSTRPEK +
Sbjct: 457 ALHGLTRVRKFQQDDTHIFCTEDQIMKEIDGLFDFLRAIYGLFGF-SFKLKLSTRPEKYM 515

Query: 436 GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGT 495
           G    W+ AE+ ++  L   K +  +     V  G+GAFYGPK +  ++DA+ R++QC T
Sbjct: 516 GKIETWNYAEDQLRAALTKFKGNDWE-----VEEGDGAFYGPKIDITIQDALKREFQCAT 570

Query: 496 IQVDFNLPSRFNAFYVNSHS-------------------------------------EKC 518
           IQ+D+ +P  F   Y+   +                                      + 
Sbjct: 571 IQLDYQMPVNFKLEYMTGETGAKAKPTEKPAENPDEKPAGDAAKPDAPPTNSDEPGPGRA 630

Query: 519 HPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSH 578
            PV+IHRA+ GS ERF GI+IE+F G  P WLSP Q ++  +  +  +Y +E+  +LK  
Sbjct: 631 RPVVIHRAIIGSFERFFGIIIEHFGGKWPFWLSPRQILIVPVMPAINDYVEELQQILKGD 690

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
            L+++ D    T+  KIR   I +   I + G +E S R++ IR     ++Q
Sbjct: 691 KLNVDIDISGNTMQKKIRTGQIAQYNFIFVVGAQEKSTRTVNIRNRDDPSSQ 742


>gi|313112983|ref|ZP_07798626.1| threonyl-tRNA synthetase [Faecalibacterium cf. prausnitzii KLE1255]
 gi|310624703|gb|EFQ08015.1| threonyl-tRNA synthetase [Faecalibacterium cf. prausnitzii KLE1255]
          Length = 594

 Score =  402 bits (1033), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 214/579 (36%), Positives = 342/579 (59%), Gaps = 24/579 (4%)

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQI 122
           P+D + L VIRH+ AHIMA+A++ ++P+   A GP  E+GFYYD D  +Q  S ++LA I
Sbjct: 14  PQD-QELHVIRHTAAHIMAQAIKRLYPQADFAFGPATENGFYYDVDLGDQKLSDEDLANI 72

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M++I+  + P     L   +A +L E +KE YK+E +  +  +   + ++QGE+ D+
Sbjct: 73  EKEMRKIVKENLPIKPFILPRAEAVKLMEERKENYKIEHMADLADETEFSFFQQGEYVDM 132

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPH+  T  +K F K+ + +GAYW+ D    ML+RI G A+  Q+EL  +    +E+ 
Sbjct: 133 CIGPHLTYTKALKAF-KITQQSGAYWKNDKENKMLTRINGVAFRNQEELDAWEKEQQEAR 191

Query: 243 KRDHRKLAREMDLFHIAED--GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQV 299
           +RDHRK+ +EM LF + +D  G G+  +   G+ ++Q L +Y++ K +   Y  + TP +
Sbjct: 192 ERDHRKIGKEMGLF-MTDDLVGRGLPMFLPAGYTVWQELENYIKEKERARGYLHVMTPCI 250

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
              +L++ SGHWD YR NMF     +       ++ L+PMNCP H+ ++ +   SYR+LP
Sbjct: 251 GTVNLYKTSGHWDHYRENMFPAMEMEG-----ESYVLRPMNCPHHMMIYANRPHSYRDLP 305

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+ E    +R E SG+L G+ R R F Q+DAH+FCT EQ+ +E   + +LI  +YKDF 
Sbjct: 306 MRIGEIAHDFRYESSGTLKGIERGRHFCQNDAHLFCTPEQIKSEVANVCDLIFEVYKDFN 365

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                  LS R     +K    DA+W+ AE  ++ VL  +       I+    +GE AFY
Sbjct: 366 ITDYRCVLSLRDPADKKKYHDDDAMWNHAEQALREVLTELG------IHFTEEIGEAAFY 419

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G ++   T Q+DF LP++F+  YV+    +  PV++HRA+ GS++RF+
Sbjct: 420 GPKLDVNVKPAVGAEYTLSTCQLDFCLPAKFHLTYVDKDGTEKTPVVLHRAILGSLDRFM 479

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
             +IE  KG  P WL+P Q  V  ++   ++YA+ +   L    + +  D  N+ I YKI
Sbjct: 480 AYLIEETKGKFPTWLAPTQVKVLPVSEKTLDYAEGVTEKLVEAGVRVVLDDDNQKIGYKI 539

Query: 596 RE-HSIKKIPIIIICGDKEASERSIGIR-RFGSTTTQKV 632
           RE   + ++P +++ G KEA   +I +R R G TTT ++
Sbjct: 540 REAQQVDRVPYMLVLGAKEAEAGNISVRDRKGETTTMEL 578


>gi|257440090|ref|ZP_05615845.1| threonine--tRNA ligase [Faecalibacterium prausnitzii A2-165]
 gi|257197442|gb|EEU95726.1| threonine--tRNA ligase [Faecalibacterium prausnitzii A2-165]
          Length = 611

 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 217/582 (37%), Positives = 344/582 (59%), Gaps = 30/582 (5%)

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQI 122
           P+D + L VIRH+ AHIMA+A++ ++PE   A GP  E+GFYYD D  +   + D+LA I
Sbjct: 29  PQD-QELHVIRHTAAHIMAQAIKRLYPEADFAFGPATENGFYYDVDLGDTKLTDDDLANI 87

Query: 123 EKKMQEIIARD---SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           EK+M++I   +    PF+   L  ++A +L E ++E YK+E +  +  +   + ++QGE+
Sbjct: 88  EKEMRKICKENLAIKPFI---LPRDEAVKLMEERQEHYKIEHMADLADETEFSFFQQGEY 144

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            D+C GPH+  T  +K F K+ + +GAYW+ D    ML+RI G A++ Q+EL  +    +
Sbjct: 145 VDMCIGPHLTYTKALKAF-KITQQSGAYWKNDKENKMLTRINGVAFHNQEELEAWEKEQQ 203

Query: 240 ESEKRDHRKLAREMDLFHIAED--GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
           E+ +RDHRK+ +EM LF + +D  G G+  +   G+ ++Q L +Y++ K +   Y  + T
Sbjct: 204 EARERDHRKIGKEMGLF-MTDDLVGRGLPMFLPAGYTVWQELENYIKEKERARGYLHVMT 262

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +   +L++ SGHWD YR NMF     +       ++ L+PMNCP H+ ++ +   SYR
Sbjct: 263 PCIGTVNLYKTSGHWDHYRENMFPAMEMEG-----ESYVLRPMNCPHHMMIYANRPHSYR 317

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +LP+R+ E    +R E SG+L G+ R R F Q+DAH+FCT EQ+ +E   + NLI   YK
Sbjct: 318 DLPMRIGEIAHDFRYESSGTLKGIERGRHFCQNDAHLFCTPEQIKSEVADVCNLIFETYK 377

Query: 417 DFGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
           DF        LS R     +K    DA+W+ AEN ++ VL  +       I+    +GE 
Sbjct: 378 DFKITDYRCVLSLRDPADKKKYHDDDAMWNHAENALREVLTELG------IHFTEEIGEA 431

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           AFYGPK +  +K A+G ++   T Q+DF LP++F+  YV+    +  PV++HRA+ GS++
Sbjct: 432 AFYGPKLDVNVKPAVGAEYTLSTCQLDFCLPAKFHLTYVDKDGSEKTPVVLHRAILGSLD 491

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
           RF+  +IE  KG  P WL+P+Q  V  ++   +EYA+ I   L    + +  D  N+ I 
Sbjct: 492 RFMAYLIEETKGKFPTWLAPVQVKVLPVSEKTLEYAESITEKLVEAGVRVALDDDNQKIG 551

Query: 593 YKIR-EHSIKKIPIIIICGDKEASERSIGIR-RFGSTTTQKV 632
           YKIR    + ++P +++ G KEA   ++ +R R G TTT +V
Sbjct: 552 YKIRAAQQVDRVPYMLVLGAKEAEAGNLSVRDRKGETTTMEV 593


>gi|85093975|ref|XP_959801.1| threonyl-tRNA synthetase [Neurospora crassa OR74A]
 gi|28921255|gb|EAA30565.1| threonyl-tRNA synthetase [Neurospora crassa OR74A]
          Length = 788

 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 232/679 (34%), Positives = 355/679 (52%), Gaps = 65/679 (9%)

Query: 4   DIKLTFPDGSIKNFPVH-ATGSDVAESISRSLAKKAVAVAINGKVC-DLSDPVREG-SIE 60
           DI +T PDG+ K    +  T +++A+ IS SL K+ V   I+G+   DL  P+ +   +E
Sbjct: 78  DILITMPDGTTKTGKAYETTPAEIAKGISNSLFKRTVVARIDGETLWDLERPLEKSCKLE 137

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD--FDKEQPFSSDE 118
           ++   D +   V  HS AHI+ EA +  +    + IGP +++GFYY+          S +
Sbjct: 138 LLDFNDDQGKFVFWHSSAHILGEACERRFG-CSLCIGPPVDNGFYYEMALPGGAAVQSSD 196

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQG 177
            A +E  + +I+    PF +  +S E   ++F      YK  I+ + IP     T+YR G
Sbjct: 197 WAPLENIVTKIVKEKQPFQRLEMSKEDLLKMFAYN--PYKQHIIKDKIPDGTRTTVYRNG 254

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
              DLCRGPHV  T +++ F  +MK + +Y+ GD+N   L RIYG ++  ++++  +  F
Sbjct: 255 PLIDLCRGPHVPDTSRIEAF-AIMKNSSSYFLGDANNDSLQRIYGVSFPDKKQMAAHKKF 313

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINT 296
           LEE+ KRDHR + ++ +LF+  E   G   W   G +I   ++ Y++ +  K  Y+E+ T
Sbjct: 314 LEEAAKRDHRLIGKQQELFYFEECSPGSAMWLPHGMRINNAIMEYIKEEYWKRGYDEVMT 373

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P + +  LW+QSGH   Y+ +MF +        D   F LKPMNCP H  +F H  +S++
Sbjct: 374 PNMFNVALWEQSGHLAHYKDDMFILDV------DKEQFGLKPMNCPAHAMMFRHRDRSHK 427

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ELP+RLA+FG ++RNE SG+L GL RVR F QDDAH+FC ++Q+  E   + + + S Y 
Sbjct: 428 ELPLRLADFGVLHRNEASGALSGLTRVRRFQQDDAHIFCREDQIKAEVADLFDFMKSFYG 487

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
             G     +KLSTRPEK +G    WD AE  +K  L+    ++          G+GAFYG
Sbjct: 488 MLGL-TFKLKLSTRPEKYMGEIETWDRAEARLKEALNEFVAATGGTWELNE--GDGAFYG 544

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK------------------- 517
           PK +  + D + R WQC TIQ+DF  P  F+  Y+ + ++                    
Sbjct: 545 PKIDIAVLDCLNRPWQCATIQLDFQQPINFSLEYMTADAQAKQDEDKAASKAAKPEAPKE 604

Query: 518 --------------------------CHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLS 551
                                       PVMIHRA+ GSIERF  I+ E+F G  P W+S
Sbjct: 605 EEEAPKEGEEKKKKALLVKKPLTAGCARPVMIHRAMAGSIERFTAILAEHFAGKWPFWMS 664

Query: 552 PIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
           P Q +V  +    ++YA+E+A  LK   + ++ D    T+  KIR   + +   I + GD
Sbjct: 665 PRQVMVIPVGMGFLDYAKEVALTLKKEKIHVDVDSSGNTLQKKIRSAQLAQYNFIFVVGD 724

Query: 612 KEASERSIGIRRFGSTTTQ 630
            E + R + IR    T+TQ
Sbjct: 725 DEKTNRKVNIRYRDDTSTQ 743


>gi|254580109|ref|XP_002496040.1| ZYRO0C09086p [Zygosaccharomyces rouxii]
 gi|238938931|emb|CAR27107.1| ZYRO0C09086p [Zygosaccharomyces rouxii]
          Length = 716

 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 233/640 (36%), Positives = 352/640 (55%), Gaps = 39/640 (6%)

Query: 5   IKLTFPDGSIKNFPVHATGS-DVAESISRSLAKKAVAVAINGKVCDLSDPV-----REGS 58
           +K+   DGSIK      T   D+A+SI++SL  K     ++G++ DL  P      +E  
Sbjct: 57  LKIVLRDGSIKEATAWETAPMDIAKSIAKSLPDKLCIAKVDGQLWDLERPFEGTEGQELR 116

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD--------- 109
           +E++  E      V  HS AH++ EA +       +  GP  +DGF+YD           
Sbjct: 117 LELLDFESKEGQQVFWHSSAHVLGEACECNLG-AHICFGPPTDDGFFYDMAVRDSLNPKA 175

Query: 110 KEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES-IPAK 168
           +E+  S  +   +E   +  I +   F +  ++ E   ++F   K  YK  ++++ +P  
Sbjct: 176 EEKTVSQADFPNLEGVAKNAIKQKQKFERLLMTKEDLLKMFSYSK--YKTYLIQTKVPDG 233

Query: 169 ENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQ 228
            + T+YR G   DLC GPH+  TG++K F K++K + +Y+ GDSN   L RIYG ++  +
Sbjct: 234 GSSTVYRCGPLIDLCMGPHIPHTGRIKAF-KILKNSASYFLGDSNNESLQRIYGISFPDK 292

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI- 287
           + +  +L FLEE+  RDHR++ RE +LF   E   G  FW   G +I+ TL+  ++ +  
Sbjct: 293 KLMDAHLKFLEEASLRDHRRIGREQELFMFNEMSPGSCFWLPHGTRIYSTLVDLLKNEYR 352

Query: 288 KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
           K  YEE+ TP + +  LW+ SGHW  Y+ NMF  +   +       + LKPMNCPGH  +
Sbjct: 353 KRGYEEVITPNMYNSKLWETSGHWGHYKENMFTFEVEKEM------YGLKPMNCPGHALM 406

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
           F    +SYRELP R+A+FG ++RNE SG+L GL RVR F QDDAH+FC  +Q+  E  +I
Sbjct: 407 FKSRERSYRELPWRVADFGVIHRNEFSGALTGLTRVRRFQQDDAHIFCRSDQIGQEIERI 466

Query: 408 HNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGV 467
            + +  IY  FGFE   ++LSTRPEK VG    W+ AE  ++  L+  K   +  +N   
Sbjct: 467 FDFLSFIYGVFGFE-FKMELSTRPEKYVGKLETWNAAEATLEAALN--KWGGKWELNP-- 521

Query: 468 LLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK-----CHPVM 522
              +GAFYGPK + ++ DA+ R  QC TIQ+DF LP RF   Y +  ++        PVM
Sbjct: 522 --ADGAFYGPKIDIMISDALRRWHQCATIQLDFQLPDRFALEYKSKDNDNEGETYERPVM 579

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSI 582
           IHRA+ GS+ER   I+ E+F G  P WLSP Q +V  +      YAQE+ + + +     
Sbjct: 580 IHRAILGSVERMTAILTEHFAGKWPFWLSPRQILVVPVGVKYQPYAQEVRDKMHNAGFYA 639

Query: 583 ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           + D    T+  K+R   + K   I I G++E +E+S+ IR
Sbjct: 640 DVDLSGNTLQKKVRNGQMLKYNFIFIVGEQEMNEKSVNIR 679


>gi|322697146|gb|EFY88929.1| threonyl-tRNA synthetase, putative [Metarhizium acridum CQMa 102]
          Length = 759

 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 233/674 (34%), Positives = 359/674 (53%), Gaps = 72/674 (10%)

Query: 22  TGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHI 80
           T   + + +++ +A +AV   +NG+V DL+ P+  + ++  ++ +DP   AV  HS AH+
Sbjct: 78  TPGQLLKHVAKVIASEAVVAKVNGEVWDLTRPLEADCAVSYLSSKDPEGRAVFWHSAAHV 137

Query: 81  MAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD-----SP 135
           + EA +  +    ++ GP    GF+YD    +    D + + ++   E +A+       P
Sbjct: 138 LGEACEHQF-GCMLSHGPPTNMGFFYDMAMRE---GDAVKETDRPALEALAKKFFKEKQP 193

Query: 136 FLKQYLSHEKARELFESKKEAYKVEILES-IPAKENVTLYRQGEWFDLCRGPHVRSTGQV 194
           F +  ++ E  R+LF   K  YK+  +E  +P   + T+YR G   DLC GPH+++T Q+
Sbjct: 194 FERVEIAKEDLRKLFGYSK--YKMHYIEKFVPDGGSTTVYRNGSLVDLCTGPHIQNTKQI 251

Query: 195 KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMD 254
             F K+M  + AY+ GD     L RI G A+    ++ ++L +LEE++KRDH+ + +   
Sbjct: 252 SAF-KIMGNSSAYFLGDQANDSLQRISGVAFPKNDQMKEWLTYLEEAKKRDHQLIGKNQK 310

Query: 255 LFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDS 313
           LF  +    G  F+   G +IF  + + +R +     Y+E+++P + D  LW+ SGHWD 
Sbjct: 311 LFWFSPLSPGSPFFLPHGTRIFNAIQAMLREQYWMRGYDEVHSPLMYDAQLWKTSGHWDH 370

Query: 314 YRANMFAV--------------KCADDTIKDL-------------------RTFALKPMN 340
           Y+ +MF V                  D  KD                    R FALKPMN
Sbjct: 371 YQEDMFRVPLKHTHGAAPDASAASGPDASKDANKPADKDGENAEVAKLEQERLFALKPMN 430

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
           CPGH  +F    +SYR LP R+A+F  ++RNE SG+L GL RVR F QDDAH+FCT +Q+
Sbjct: 431 CPGHALMFASEERSYRSLPWRVADFSVLHRNEASGALTGLTRVRKFQQDDAHIFCTIDQV 490

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQ 460
            +E   +   +  +Y  FGF    +KLSTRP+  +G  + WD AE+ +K  L   K    
Sbjct: 491 TDELRGLFKFMTHVYTMFGF-PFKLKLSTRPDSYMGKLSDWDAAEDRLKKALQEFKGDDW 549

Query: 461 DRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK--- 517
             IN     G+GAFYGPK +  + DA+GR++QC TIQ+DF LP  FN  Y  + S     
Sbjct: 550 -VINP----GDGAFYGPKIDVTVHDALGREFQCATIQLDFQLPQNFNLLYRTNESTADRA 604

Query: 518 --------------CHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSS 563
                           PVMIHRAV GS ERF+GI+IE+F G  P WLSP Q +V  I   
Sbjct: 605 KGEGEEEGDIPSGMARPVMIHRAVIGSFERFMGILIEHFAGKWPFWLSPRQVMVIPIMKD 664

Query: 564 AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR- 622
           A +YA+E+ ++L    L  + D    T+  KIR   + +   +++ G +E  +R++ IR 
Sbjct: 665 AEDYAREVRDILHDAKLYADVDVSGNTLQKKIRAAQLAQYNFVMVVGAEEIEKRAVNIRN 724

Query: 623 RFGSTTTQKVSLLD 636
           R   ++ QK +++D
Sbjct: 725 RDDPSSQQKGAMID 738


>gi|62078811|ref|NP_001014062.1| threonyl-tRNA synthetase, mitochondrial precursor [Rattus
           norvegicus]
 gi|81884372|sp|Q68FW7|SYTM_RAT RecName: Full=Threonyl-tRNA synthetase, mitochondrial; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS; AltName:
           Full=Threonyl-tRNA synthetase-like 1; Flags: Precursor
 gi|51259375|gb|AAH79154.1| Threonyl-tRNA synthetase 2, mitochondrial (putative) [Rattus
           norvegicus]
          Length = 723

 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 230/641 (35%), Positives = 345/641 (53%), Gaps = 40/641 (6%)

Query: 5   IKLTFPDGS-IKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           IK++ P+G  +     + T   +A+ IS +LA  AVA  +NG++ DL  P+  +  +  +
Sbjct: 66  IKISLPEGQKVDAVAWNTTPYQLAQQISSTLADTAVAAEVNGELYDLDRPLETDCHLRFL 125

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF--DKEQPFSSDELA 120
           T + P   AV   S AH++  A +     V +  GP  E GFY DF   KE+   S EL 
Sbjct: 126 TFDSPEGKAVFWRSSAHVLGAAAEQHLGAV-LCRGPSTESGFYLDFFLGKERTVRSTELP 184

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            +E+  QEII    PF +   S  + R+LF  K   +K+ ++E        T+Y  G   
Sbjct: 185 TLERICQEIITAAQPFRRLEASRGQLRQLF--KDNHFKLHVIEEKVTGTTATVYGCGMSV 242

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLC+GPH+R TGQ+    KL+  + A WR       L R+ G ++   + L  +    EE
Sbjct: 243 DLCQGPHLRHTGQIGAL-KLLTNSSALWRSSEAPETLQRVSGISFPKAELLRNWEARREE 301

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQV 299
           +E RDHR++ +E +LF   E   G  F+  +G +I+  L++++R +  +  + E+ TP +
Sbjct: 302 AELRDHRRIGKEQELFFFHELSPGSCFFLPRGTRIYNALVAFIRAEYARRGFSEVKTPTL 361

Query: 300 LDQHLWQQSGHWDSYRANMFAVK-----------------CADDTIKDLRTFALKPMNCP 342
               LW+QSGHW+ YRA+MF++K                 C  DT+      ALKPMNCP
Sbjct: 362 FSTKLWEQSGHWEHYRAHMFSLKPPGTDGVDSSQSGHPARCPKDTL------ALKPMNCP 415

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN 402
            H  +F H  +S+RELPVRLA+FG ++R E SGSL GL R+  F QDDAH+FC   Q+  
Sbjct: 416 AHCLMFAHRPRSWRELPVRLADFGVLHRAEASGSLGGLTRLWRFQQDDAHIFCAPSQLEA 475

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
           E     + + S+Y   GF    + LSTRP   +G   LWD AE +++  L+         
Sbjct: 476 EIRGCLDFLRSVYSVLGF-SFHLALSTRPPGFLGEPHLWDQAEKVLQQALEEFGEPWN-- 532

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
           +N G    +GAFYGPK +  L DA+GR  QCGTIQ+DF LP RF+  Y         PV+
Sbjct: 533 LNPG----DGAFYGPKIDVHLHDALGRPHQCGTIQLDFQLPLRFDLQYKGPAGAPECPVL 588

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSI 582
           IHRAV GS+ER +G++ E+  G  PLWLSP Q +V  + +   +YA+++   L++  L  
Sbjct: 589 IHRAVLGSVERLLGVLAESCGGRWPLWLSPFQVVVIPVRTEQEDYARQVQQCLQAAGLVS 648

Query: 583 ETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           + D     T++ ++R   +       + G +E S+ S+ +R
Sbjct: 649 DLDADCGLTLSRRVRRAQLAHYNFQFVVGQREQSQMSVNVR 689


>gi|91226476|ref|ZP_01261225.1| threonyl-tRNA synthetase [Vibrio alginolyticus 12G01]
 gi|91189108|gb|EAS75389.1| threonyl-tRNA synthetase [Vibrio alginolyticus 12G01]
          Length = 410

 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 190/414 (45%), Positives = 282/414 (68%), Gaps = 11/414 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPE 65
           +T PDGS + F    +  +VA+SI   LAK  +A  +NG   D  D + E  S+EIIT +
Sbjct: 4   ITLPDGSQRQFDNPVSTMEVAQSIGPGLAKATIAGRVNGNRVDACDLIEEDASLEIITVK 63

Query: 66  DP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  A++ ++P+ ++AIGP I++GFYYD D ++  + ++L +IEK
Sbjct: 64  DEVDGLEIVRHSCAHLLGHALKQLYPQAKMAIGPTIDNGFYYDIDLDESLTQEDLEKIEK 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLC 183
           +M+E+       +K+ +S ++AR+ FES+ E YKVEIL E++   +   LY   E+ D+C
Sbjct: 124 RMKELAKTKYEVVKKKVSWQEARDTFESRGEPYKVEILDENVSRDDRPGLYHHEEYIDMC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +     + F L+ VAGAYWRG+S+  ML RIYGTA++ ++ L  +L  LEE+ K
Sbjct: 184 RGPHVPNMS-FCQHFTLLNVAGAYWRGNSDNKMLQRIYGTAFHDKKALKAHLTRLEEAAK 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRK+ +++DLFH+ ++  G++FWH  GW IF+ L  ++R K+ +  Y+E+  P ++D+
Sbjct: 243 RDHRKIGKQLDLFHMQQEAPGMVFWHHNGWSIFRDLEVFIRAKLDEYGYQEVKGPLMMDR 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+
Sbjct: 303 VLWERSGHWDKYADAMFT------TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRM 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           AEFGS +RNEPSG+LHG+MRVRGFTQDDAH+FCT+ Q+  E      ++   Y+
Sbjct: 357 AEFGSCHRNEPSGALHGIMRVRGFTQDDAHIFCTESQIQEEVTNCIKMVYDTYQ 410


>gi|325188237|emb|CCA22777.1| unnamed protein product [Albugo laibachii Nc14]
          Length = 756

 Score =  401 bits (1031), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 214/562 (38%), Positives = 320/562 (56%), Gaps = 21/562 (3%)

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQIE 123
           ED R   V  HS AHI+ EA++ +     + IGP +E GFYYD F     +   E + +E
Sbjct: 183 EDGR--MVFWHSSAHILGEAMEQL-KGCFLTIGPPVEGGFYYDAFMGNIAWQESEWSVLE 239

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES-IPAKENVTLYRQGEWFDL 182
           K  Q+I+  +  F +  L+ E+A ELF      +K +++ + IP     T YR G   DL
Sbjct: 240 KTCQKIVKENQNFERLVLTREEALELFADN--VFKTQLIATKIPEGGKTTAYRCGSLIDL 297

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG+VK    + K +  YW G +    L R+YG ++ ++ +L ++ +F  E+ 
Sbjct: 298 CRGPHVPSTGRVKAL-AITKTSSTYWLGKTTNDSLQRVYGVSFPSKAQLKEWKHFQAEAT 356

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHR+L    DL+       G  FW   G  IF  L+ ++R + ++  Y E+ TP + +
Sbjct: 357 KRDHRRLGLSQDLYFFHSLSPGSAFWLPNGAHIFSKLLEFLRAQYRERGYNEVITPNMFN 416

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             LW  SGH   Y+ NMF  +       + + FALKPMNCP H  +F+H L+SYRELP+R
Sbjct: 417 MELWNTSGHAAHYKENMFVFEV------ESQEFALKPMNCPSHCLMFDHRLRSYRELPIR 470

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
            A+FG ++RNE SG+L GL RVR F QDDAH+FC ++Q+  E +     +  +Y  F   
Sbjct: 471 YADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCREDQIKKEIIDFLQFMKFVYDTFDI- 529

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
           +  ++LSTRP K +G    W+ AE  +   LD     +Q R N     G+GAFYGPK + 
Sbjct: 530 RFQLELSTRPAKAMGELEQWNRAEAQLASALDEFIGKNQWRENP----GDGAFYGPKIDI 585

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC-HPVMIHRAVFGSIERFIGIMIE 540
           ++ DA+ R  QC T+Q+DF LP RFN  Y +   E    P++IHRA++GS+ERFI +++E
Sbjct: 586 MITDALNRQHQCATVQLDFQLPIRFNLKYRSDDEEGFKRPIIIHRAIYGSLERFIAVLVE 645

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           ++    P WLSP Q ++ T+ ++ VEY  ++   +      +E +   +T+N KIRE  +
Sbjct: 646 HYAAKFPFWLSPRQILIVTVGAAFVEYGYQVKEAIFRAGFQVEIEDSGKTLNKKIREGQL 705

Query: 601 KKIPIIIICGDKEASERSIGIR 622
                I++ G KE   +S+ IR
Sbjct: 706 AHYNFILVVGAKEQETQSVNIR 727


>gi|301089746|ref|XP_002895146.1| threonyl-tRNA synthetase [Phytophthora infestans T30-4]
 gi|262101719|gb|EEY59771.1| threonyl-tRNA synthetase [Phytophthora infestans T30-4]
          Length = 744

 Score =  401 bits (1030), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 236/681 (34%), Positives = 362/681 (53%), Gaps = 61/681 (8%)

Query: 5   IKLTFPDGSIK-NFPVHATGSDVAESISRSLAKKAV------------------------ 39
           IK+T PDG++K       T  DVA  IS+ LA + V                        
Sbjct: 70  IKITLPDGAVKEGIAWQTTPLDVALGISQGLADQVVVARVTYRGKPEDPFSVTAADVDGN 129

Query: 40  ------------AVAINGKVCDLSDP-VREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQ 86
                       AVA + ++ D+  P + +  +E++   D     V  HS AHI+ E+++
Sbjct: 130 EASDKAGESCCGAVADSSELWDVFRPLIGDCRLELLKFNDAEGRMVFWHSSAHILGESLE 189

Query: 87  SIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEK 145
           +I     + IGP +E GFYYD +   +     +L+ IEK  Q+++     F +  LS E+
Sbjct: 190 TI-KGAHLTIGPPVEGGFYYDSYMGTETIPESDLSVIEKACQKVVKDKQKFERIVLSKEE 248

Query: 146 ARELFESKKEAYKVEILES-IPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVA 204
           A E+F      +K +I+ + IP     T YR G   DLCRGPHV  TG++K    + + +
Sbjct: 249 ALEMFADN--VFKTQIISTKIPDGGKTTAYRCGPLIDLCRGPHVPHTGKIKAL-AVTRTS 305

Query: 205 GAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKL--AREMDLFHIAEDG 262
            ++W G +    L R+YG ++  + ++ ++ +F  E+ KRDHR+L  + E+  FH    G
Sbjct: 306 SSHWLGKTTNDALQRVYGISFPDKNKMKEWKHFQAEAAKRDHRRLGVSEELFFFHSLSPG 365

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG  FW   G  I+  L+ ++R + +   Y EI TP + +  LW  SGH   Y+ NMF  
Sbjct: 366 SG--FWLPHGSAIYFKLLKFIREQYRARGYTEIITPNIYNMELWNISGHAQHYKENMFVF 423

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
                   + + +ALKPMNCP    +F+   +SYRELP+RLA+ G ++RNE SG+L GL 
Sbjct: 424 DV------EGQEYALKPMNCPAASLMFDFRQRSYRELPIRLADCGVLHRNELSGALTGLT 477

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALW 441
           RVR F QDDAH+FC  +Q+  E L     +  +Y  FG E   ++LSTRPEK +G    W
Sbjct: 478 RVRRFQQDDAHIFCRDDQIKKEVLDFLTFMKYVYDVFGIE-FNLELSTRPEKAMGELEQW 536

Query: 442 DDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFN 501
           + AE  +   LD    + +  +N     G+GAFYGPK + ++ DA+ R  QC T+Q+DF 
Sbjct: 537 ERAETQLAQALDEFVGAGKWVVNP----GDGAFYGPKIDIMITDALKRQHQCATVQLDFQ 592

Query: 502 LPSRFNAFYVNSHSEKC-HPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTI 560
           LP RFN  Y    +E    PV+IHRA++GS+ERF+ +++E++ G  P WLSP Q ++ T+
Sbjct: 593 LPIRFNLKYRTDDAENFKRPVIIHRAIYGSLERFVAVLVEHYAGKFPFWLSPRQILIVTV 652

Query: 561 TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
            ++ V+Y  E+ + L      +E D   +T+N KIRE  +     I++ G  E   RS+ 
Sbjct: 653 GAAFVDYGYEVKDALFRAGFDVEIDDSGKTLNKKIREGQMAHYNFILVVGAHEKETRSVN 712

Query: 621 IRRFGSTTTQKVSLLDAIPIL 641
           IR   +      +L +AI + 
Sbjct: 713 IRTRDNKVRGTKTLEEAISMF 733


>gi|70993228|ref|XP_751461.1| threonyl-tRNA synthetase [Aspergillus fumigatus Af293]
 gi|66849095|gb|EAL89423.1| threonyl-tRNA synthetase, putative [Aspergillus fumigatus Af293]
 gi|159125604|gb|EDP50721.1| threonyl-tRNA synthetase, putative [Aspergillus fumigatus A1163]
          Length = 737

 Score =  401 bits (1030), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 227/662 (34%), Positives = 361/662 (54%), Gaps = 47/662 (7%)

Query: 4   DIKLTFPDGSIKNFPVHA---TGSDVAESISRSLAKKAVAVAINGK-VCDLSDPV-REGS 58
           ++ L   DG+    P  A   T       + + ++   V   I+GK + DL+ P+ R+ +
Sbjct: 70  NVLLDLGDGNPSPVPAKAWETTPGSFLRDVPKDISANVVLAKIDGKELWDLNRPLERDCT 129

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF---DKEQPFS 115
           +  +  + P    V  HS AH + EA +  +    ++ GP    GF+YD    D      
Sbjct: 130 VSYVPFDSPEGREVFWHSSAHCLGEACECEY-GCLLSHGPPTPQGFFYDMAMPDNRVVRE 188

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           SD  A ++ +   I      F +  ++ E  +++F   K  YK+  ++ +   E  T+YR
Sbjct: 189 SDWPA-LDSRASRIFKEKQSFDRLEVTKENLKKMFAYSK--YKLHYIDKLVTGEKSTVYR 245

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
            G   DLCRGPH+++TG++K F K+M+ + AY+ GD N   L RI G A+  ++++ ++L
Sbjct: 246 CGTLVDLCRGPHIQNTGKIKTF-KIMQNSSAYFLGDQNNDSLQRIRGVAFPDKKQMQEHL 304

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEI 294
            FLEE+EKR+H ++ ++ +LF   E   G  F    G KIF  L + +R +  K  Y+E+
Sbjct: 305 KFLEEAEKRNHLRIGKDQELFFFDEVSPGCPFLLPNGTKIFNALQALLRAEYRKRGYQEV 364

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
            TP + D  +W++SGHW  Y+ +MF +        + R +ALKPMNCPGH  +F H  +S
Sbjct: 365 QTPNMYDVGIWKRSGHWAHYKDDMFKLDV------EKREWALKPMNCPGHFVLFGHRERS 418

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YRELP+R+A+FG ++RNE SG+L GL RVR F QDD H+FCT++Q+ +E   + + + SI
Sbjct: 419 YRELPLRIADFGVLHRNEASGALSGLTRVRKFQQDDTHIFCTQDQIASEIEGLFDFLQSI 478

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           Y  FGF    +KLSTRPEK +G    W+ AE  +K  +   K       +  +  G+GAF
Sbjct: 479 YGLFGF-TFKLKLSTRPEKYLGDLETWNYAEEQLKSAMTKFKGK-----DWTIDEGDGAF 532

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV----------NSHSE-------- 516
           YGPK +  + DA+ R++QC TIQ+D+  P  F   Y+          +S +E        
Sbjct: 533 YGPKIDITIADALKREFQCATIQLDYQAPINFKLEYMTNEKGQAVMEDSKNEGETKSNEP 592

Query: 517 ---KCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIAN 573
              +  PV+IHRA+ GS ERF+GI+IE+F G  P W+SP Q ++  +  +  +Y +E+  
Sbjct: 593 GPGRARPVVIHRAIIGSFERFLGILIEHFGGKWPFWISPRQILIVPVMPAVNDYVEELQQ 652

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
           +L+   L+++ D    T+  KIR   + +   I + G +E   RS+ IR      TQ   
Sbjct: 653 ILRGDKLNVDIDISGNTMQKKIRTGQLAQYNFIFVVGAQEKESRSVNIRNRDDPATQHKG 712

Query: 634 LL 635
           ++
Sbjct: 713 VM 714


>gi|257076511|ref|ZP_05570872.1| threonyl-tRNA synthetase [Ferroplasma acidarmanus fer1]
          Length = 668

 Score =  400 bits (1029), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 230/647 (35%), Positives = 357/647 (55%), Gaps = 57/647 (8%)

Query: 17  FPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPEDPRSLAVIRH 75
           F +H  G    E +        VA     K+ DLSD   + G +E I    P    ++ H
Sbjct: 7   FNIHK-GEQFQEIVPEKSGHSIVAARFLNKLYDLSDVAPDNGEVEFIQINSPEGEKILLH 65

Query: 76  SCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSP 135
           S AH++A A+  ++P+         ED FYYDF+  +P S ++   IE+KMQE++  + P
Sbjct: 66  STAHLLANAIVDLYPDALPNTSNESEDTFYYDFNM-KPVSIEDFPLIEEKMQELVQANIP 124

Query: 136 FLKQYLSHEKARELFESKKEAYKVE-ILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQV 194
            +++ L   +  + F   K  YK++ I E++P  EN ++Y QG + + CRGPHV STG +
Sbjct: 125 IMRKILPKNEILKEFSYNK--YKLDKINENVPDGENSSIYIQGNYKEFCRGPHVPSTGYI 182

Query: 195 KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMD 254
             F KL+ ++   + GD N+  + RIYGTA+  +++L  +L   EE+ KRDHRK+ +EMD
Sbjct: 183 GAF-KLLSISSTNYEGDVNKDKMIRIYGTAFPDKKQLKAFLLRREEAIKRDHRKIGQEMD 241

Query: 255 LFHI-AEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWD 312
           LF    E   G+ F+   G  I   LI+YM+    K  +EE+ T       +W+QSGH+ 
Sbjct: 242 LFTFDNERAPGMPFYAPNGAIIRNELINYMKELNEKSGWEEVWTAHAFKDIIWKQSGHYY 301

Query: 313 SYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE 372
            Y+ +MF       T+ +   + LKPMNCPGH+A+F   + SYR++PV+ +E G+VYR E
Sbjct: 302 KYKDDMFLF-----TLPNGDNYGLKPMNCPGHIAIFQRSVYSYRDMPVKYSEAGTVYRYE 356

Query: 373 PSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD-FGFEKIMVKLST-- 429
            SG + GL R RGFT DD H F  ++Q+F+E + +  +I SI+K   G E+I   LS   
Sbjct: 357 KSGEMGGLTRPRGFTIDDGHGFVREDQIFDETISLLKIIPSIFKTILGTEEITYDLSVMD 416

Query: 430 --RPE-------------------------------KRVGSD-ALWDDAENIMKGVLDTI 455
              PE                               + + SD ++WD+A   ++  L+ +
Sbjct: 417 KQHPENYLMSYECSSCGEKFMLRAASQEYKCPACGSENLNSDFSMWDNATENLRRALEEL 476

Query: 456 KNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS 515
           K      +      GE AFYGPK +  +KDA+GR WQ  TIQ+DF +P+ F+ +Y++ + 
Sbjct: 477 K------LKYTEYPGEAAFYGPKIDVHIKDALGRLWQLSTIQIDFFMPANFDLYYIDKND 530

Query: 516 EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLL 575
            K  PV+IHRA++GS ERFI I++E+F G LPLWL+P+QA +  ++ +  EYA EI   L
Sbjct: 531 TKVRPVIIHRAIYGSYERFIAILLEHFNGKLPLWLTPLQAYIIPVSEAYNEYATEINKKL 590

Query: 576 KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           +   +  + D  + TI+ KI+     +   I++ G+KE +  S+ +R
Sbjct: 591 REKGIRSKVDISDGTISKKIKLIRTMRPSYILVVGEKELANNSVSVR 637


>gi|295698321|ref|YP_003602976.1| threonyl-tRNA synthetase [Candidatus Riesia pediculicola USDA]
 gi|291157332|gb|ADD79777.1| threonyl-tRNA synthetase [Candidatus Riesia pediculicola USDA]
          Length = 414

 Score =  400 bits (1029), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 185/410 (45%), Positives = 276/410 (67%), Gaps = 17/410 (4%)

Query: 237 FLEESEK-RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEI 294
           F   +EK +DHR + R+++LF+  ++  G +FW+  G  IFQ L  Y+R K+K+  Y+E+
Sbjct: 8   FSNHTEKEQDHRSIGRQLELFYFDQNSPGSVFWNPNGLIIFQELKRYIRLKLKEYQYQEV 67

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
            TP++L + LW+++GH  +Y   MF V          R + LKPMNCPGH+ +F   ++S
Sbjct: 68  KTPEILHKSLWKKTGHLQNYEKYMFKVSSES------RKYCLKPMNCPGHIKIFQQKIRS 121

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YR+LP+R+AEFG+ +RNE SGSLHGLMRVR FTQDDAH+FCTKEQ+F E  K   ++  +
Sbjct: 122 YRDLPLRIAEFGNCHRNELSGSLHGLMRVREFTQDDAHIFCTKEQVFEEIKKCIGMVQEV 181

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           YK FGF+KI ++L+TRP++R+G +  WD AE+I++  L+             +L   GAF
Sbjct: 182 YKTFGFKKISIRLATRPKQRIGEEKYWDYAESILEKALEK---------EFDLLPENGAF 232

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK E+ L D + R+WQCGTIQ+DF LP +   FY++  ++K HP++IHRA+ GSIERF
Sbjct: 233 YGPKIEFTLHDRLEREWQCGTIQLDFLLPIQLGVFYIDQKNKKQHPMIIHRAILGSIERF 292

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
           IGI+IE++ G LP WLSPIQ +V +++   + ++++I   +K   + +  D +NE IN K
Sbjct: 293 IGILIEHYSGYLPTWLSPIQVVVISVSKKYINFSKKIVQRIKYAGIRVYHDLKNEKINLK 352

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IR+HSI KIP I++CG+KE    S+ IRR      + +S+ + I +++ E
Sbjct: 353 IRKHSINKIPYIVLCGEKEEKTGSVSIRRKLEKVIKTISIENFIKMVSSE 402


>gi|322709352|gb|EFZ00928.1| threonyl-tRNA synthetase, putative [Metarhizium anisopliae ARSEF
           23]
          Length = 759

 Score =  400 bits (1029), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 232/674 (34%), Positives = 359/674 (53%), Gaps = 72/674 (10%)

Query: 22  TGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHI 80
           T   + + +++ +A +AV   +NG+V DL+ P+  + ++  ++ +DP   AV  HS AH+
Sbjct: 78  TPGQLLKHVAKVIASEAVVAKVNGEVWDLTRPLEADCAVSYLSSKDPEGRAVFWHSAAHV 137

Query: 81  MAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD-----SP 135
           + EA +  +    ++ GP    GF+YD    +    D + + ++   E +A+       P
Sbjct: 138 LGEACEHQF-GCMLSHGPPTNMGFFYDMAMRE---GDAVKETDRPALEALAKKFFKEKQP 193

Query: 136 FLKQYLSHEKARELFESKKEAYKVEILES-IPAKENVTLYRQGEWFDLCRGPHVRSTGQV 194
           F +  ++ E  R+LF   K  YK+  +E  +P   + T+YR G   DLC GPH+++T Q+
Sbjct: 194 FERVEIAKEDLRKLFGYSK--YKMHYIEKFVPDGGSTTVYRNGSLVDLCTGPHIQNTKQI 251

Query: 195 KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMD 254
             F K+M  + AY+ GD     L RI G A+    ++ ++L +LEE++KRDH+ + +   
Sbjct: 252 SAF-KIMGNSSAYFLGDQANDSLQRISGVAFPKNDQMKEWLTYLEEAKKRDHQLIGKNQK 310

Query: 255 LFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDS 313
           LF  +    G  F+   G +IF  + + +R +     Y+E+++P + D  LW+ SGHWD 
Sbjct: 311 LFWFSPLSPGSPFFLPHGTRIFNAIQTMLREQYWMRGYDEVHSPLMYDVQLWKTSGHWDH 370

Query: 314 YRANMF--------------AVKCADDTIKDL-------------------RTFALKPMN 340
           Y+ +MF               V    D  KD                    R FALKPMN
Sbjct: 371 YQEDMFRVPLKHTHGAAPDAPVASGPDAAKDADKPAGKDGENAEVAKLEQERLFALKPMN 430

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
           CPGH  +F    +SYR LP R+A+F  ++RNE SG+L GL RVR F QDDAH+FCT +Q+
Sbjct: 431 CPGHALMFASEERSYRSLPWRVADFSVLHRNEASGALTGLTRVRKFQQDDAHIFCTIDQV 490

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQ 460
            +E   +   +  +Y  FGF    +KLSTRP+  +G  + WD AE+ +K  L   K    
Sbjct: 491 TDELRGLFKFMTHVYTMFGF-PFKLKLSTRPDSYMGKLSDWDAAEDRLKKALQEFKGDDW 549

Query: 461 DRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK--- 517
             IN     G+GAFYGPK +  + DA+GR++QC TIQ+DF LP  FN  Y  + S     
Sbjct: 550 -VINP----GDGAFYGPKIDVTVNDALGREFQCATIQLDFQLPQNFNLLYRTNESTADRA 604

Query: 518 --------------CHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSS 563
                           PVMIHRAV GS +RF+GI+IE+F G  P WLSP Q +V  I   
Sbjct: 605 KGEGEEEGGIPSGMARPVMIHRAVIGSFDRFMGIIIEHFGGKWPFWLSPRQVMVIPIMKD 664

Query: 564 AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR- 622
           A +YA+E+ ++L    L  + D    T+  KIR   + +   +++ G +E  +R++ IR 
Sbjct: 665 AEDYAREVRDILHDAKLYADVDVSGNTLQKKIRAAQLAQYNFVMVVGAEEIEKRAVNIRN 724

Query: 623 RFGSTTTQKVSLLD 636
           R   ++ QK +++D
Sbjct: 725 RDDPSSQQKGAMID 738


>gi|294886613|ref|XP_002771785.1| threonyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
 gi|239875547|gb|EER03601.1| threonyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
          Length = 820

 Score =  400 bits (1028), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 240/690 (34%), Positives = 367/690 (53%), Gaps = 85/690 (12%)

Query: 1   MPSD-IKLTFPDGSIK-NFPVHATGSDVAESISRSLAKKAVAVAI---------NGKVCD 49
           +P D I +  PDG+ K       T  D+A  IS+ LA   VA  I         +  V D
Sbjct: 77  LPKDPITIVLPDGTQKEGRKFETTPLDIAIGISKGLANSVVAAKILYTEPVDSMDQTVWD 136

Query: 50  LSDPVREGS--IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD 107
           LS P+ EGS  +E++  + P       HS AHI+ EA++  +    + IGP +E+GFYYD
Sbjct: 137 LSRPL-EGSCKLELLKFDSPEGKDTFWHSSAHILGEAMEQEYG-CYLTIGPPLENGFYYD 194

Query: 108 -FDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES-I 165
            F        ++  +IEK++  I+  D  F +  ++ E+A ELF      +K++++ + +
Sbjct: 195 GFFGNLKLGPNDYEKIEKRIDSIVKSDQKFQRLVVTKEEALELFAYN--PFKLQLISTKV 252

Query: 166 PAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAW 225
           P     ++YR G   DLCRGPH+  TG  K F+ + K + AYW G +    L R+Y  ++
Sbjct: 253 PDGSLTSVYRIGSLVDLCRGPHLPRTGIAKAFW-VNKNSQAYWLGKAENDSLQRVYAISF 311

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMR 284
            T++ L +Y   +EE+ KRDHR + ++ DLF      S G  FW   G  I+  L+ ++R
Sbjct: 312 PTEKMLKEYKRNVEEAMKRDHRLIGKKQDLFFFHPTMSPGSCFWTSHGAVIYNKLVDFIR 371

Query: 285 RKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPG 343
           R+ +   ++E+ TP +  + L+QQSGH  +Y+ NM+++    +T      + LKPMNCPG
Sbjct: 372 REYRLRGFDEVITPNIFSEALFQQSGHCGNYKDNMYSMNIEGET------WFLKPMNCPG 425

Query: 344 HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE 403
           H  +F+  ++SY+ELP+R+A+FG ++RNE SG+L GL RVR F QDDAH+FC  +Q+ +E
Sbjct: 426 HCMIFDQKVRSYKELPIRMADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCRPDQVQDE 485

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            +     +  +Y  FGF+   V LSTRP+K +GS A+WD AE+ +K  L+         I
Sbjct: 486 IVHALEFLKFVYNTFGFD-FSVCLSTRPKKAIGSRAIWDTAESGLKNALEACG------I 538

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC----- 518
           +  +  G+GAFYGPK +  L+DA+ R  QCGTIQ+DFNLP RFN  Y  + +E+      
Sbjct: 539 DYDLNPGDGAFYGPKIDIRLRDALNRYHQCGTIQLDFNLPIRFNLQYRIAETEESGDAHA 598

Query: 519 ---------------------------------------------HPVMIHRAVFGSIER 533
                                                         PVMIHRA+ GSIER
Sbjct: 599 ASEAANSPVDEQQKGSTQSSAAVENVGSKAKADEITLGELKHGFERPVMIHRAILGSIER 658

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
              I+ E+F G  P WLSP Q +V  ++    +YA  +   L       + D    T+N 
Sbjct: 659 CTAILTEHFGGKWPFWLSPRQVMVVPVSDKYSDYADYVRKQLVRLGYEADADLSTRTMNK 718

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRR 623
           K+RE  +     I + G+KE ++ ++ +R+
Sbjct: 719 KVREAQVAAFNYIAVVGEKEQNDLTVTLRK 748


>gi|84998192|ref|XP_953817.1| threonyl-tRNA synthetase [Theileria annulata]
 gi|65304814|emb|CAI73139.1| threonyl-tRNA synthetase, putative [Theileria annulata]
          Length = 743

 Score =  400 bits (1027), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 226/628 (35%), Positives = 355/628 (56%), Gaps = 46/628 (7%)

Query: 49  DLSDPVREGS-IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD 107
           D+  P  +   +E +     +   V  HS AHI+  A+++ +    + IGP +  GFYYD
Sbjct: 129 DMHRPFEDSCKVEFLDFNSEQGQHVYWHSSAHILGSALETCFGGF-LTIGPALSSGFYYD 187

Query: 108 -FDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES-I 165
            +        +++  +   ++ +   +SPF +   + E+A EL   K   +KV+++++ +
Sbjct: 188 VYLGNNSVKPEDVKPLLSHVEALTNLNSPFERLVCTKEEALELM--KYNPFKVQLIKNKV 245

Query: 166 PAKENVTLYRQGEWFDLCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTA 224
           P  EN   YR G++ DLCRGPH+ +T  V+   F + K++ +YW  ++    L R+YG +
Sbjct: 246 PDGENTVCYRCGDFVDLCRGPHIPTTSMVRANSFDVTKISSSYWLSNAKSDTLQRVYGIS 305

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM 283
           +  +++L  Y   +EE+++RDHR +  ++ LF+     S G  FW   G KI+  L+ +M
Sbjct: 306 FPEKEQLKMYKNRIEEAKQRDHRTIGTDLKLFYFDTVHSPGSCFWLPNGAKIYNRLVEFM 365

Query: 284 RRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
           R   +   Y+E+ TP +    LW+QSGH+D+Y+ NM+     D        + +KPMNCP
Sbjct: 366 RDNYRVRGYQEVITPNIFSCDLWKQSGHYDNYKENMYLFNLED------TEWGMKPMNCP 419

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN 402
           GH  +F H   SY++LP+RLA+FG ++RNE +GSL GL RVR F QDDAH+FCT+EQ+ +
Sbjct: 420 GHCLMFKHLFLSYKQLPLRLADFGVLHRNELTGSLSGLTRVRRFQQDDAHIFCTREQIMD 479

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
           E L I   I  +Y  F F +   KLST+P K +G D LW+ AE  ++  L+  K  ++  
Sbjct: 480 EVLNILTFIGKVYSLFDF-RYEFKLSTKPAKALGEDELWEIAEKSLEEALN--KTGTKWT 536

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFY-----VNSHSEK 517
           +N     G+GAFYGPK + +L D + R+ QCGTIQ+DFNLP RFN  Y      ++ + +
Sbjct: 537 MNP----GDGAFYGPKIDVVLFDCLDREHQCGTIQLDFNLPIRFNLEYRDKSESSAENVR 592

Query: 518 C---HPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIA-- 572
           C    PV+IHRA+FGSIERF+ I++E  KG LP WLSP Q +   IT + ++YA E+   
Sbjct: 593 CGFNRPVIIHRAIFGSIERFVAIVLEQTKGKLPFWLSPNQLLFIPITDNHLDYALELYEK 652

Query: 573 -NLLKSHH-------------LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERS 618
            N L S+               +++ D  N TIN KI+    ++   + I GD+E   R+
Sbjct: 653 FNALGSNTNYIILIMIINGLGYNVDVDKSNNTINKKIKFGQQQRWNYMGIVGDREVETRT 712

Query: 619 IGIRRFGSTTTQKVSLLDAIPILTKESL 646
           + +R   S     +SL D + +   + L
Sbjct: 713 VSLRPRDSDEQNVISLDDLVKLFESQQL 740


>gi|293396370|ref|ZP_06640648.1| threonine-tRNA ligase [Serratia odorifera DSM 4582]
 gi|291421159|gb|EFE94410.1| threonine-tRNA ligase [Serratia odorifera DSM 4582]
          Length = 387

 Score =  400 bits (1027), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 181/391 (46%), Positives = 263/391 (67%), Gaps = 19/391 (4%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRA 316
           + E+  G++FWH  GW IF+ L +++R K+K+  Y+E+  P ++D+ LW+++GHW++Y+ 
Sbjct: 1   MQEEAPGMVFWHNDGWTIFRELEAFVRMKLKEYQYQEVKGPFMMDRVLWEKTGHWENYKD 60

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+ EFGS +RNEPSGS
Sbjct: 61  AMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMGEFGSCHRNEPSGS 114

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQM---FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
           LHGLMRVRGFTQDDAH+FCT++Q+    NEC++   ++  +Y  FGFEKI VKLSTRPEK
Sbjct: 115 LHGLMRVRGFTQDDAHIFCTEDQVRAEVNECIR---MVYDVYGTFGFEKIAVKLSTRPEK 171

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
           R+G+D +W  AE  +   L      +++ I      GEGAFYGPK E+ L D + R WQC
Sbjct: 172 RIGTDDMWTRAEEDLAAAL------TENGIPFEYQPGEGAFYGPKIEFTLHDCLDRAWQC 225

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI 553
           GT+Q+DF LP R  A YV  ++E+  PVMIHRA+ GS+ERFIGI+ E + G  P W++P+
Sbjct: 226 GTVQLDFFLPGRLGASYVGENNERVVPVMIHRAILGSMERFIGILTEEYAGFYPTWIAPV 285

Query: 554 QAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
           Q +V  IT S  +Y Q++   L+   + ++ D RNE I +KIREH+++++P +++CGDKE
Sbjct: 286 QVVVMNITDSQSDYVQQLTKKLQDAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKE 345

Query: 614 ASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
                + +R         + + + +  L KE
Sbjct: 346 VEAGKVAVRTRRGKDLGSLDVNEVVDKLQKE 376


>gi|13358098|ref|NP_078372.1| threonyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|170761869|ref|YP_001752619.1| threonyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           27815]
 gi|171920446|ref|ZP_02690665.2| threonyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC
           27813]
 gi|183508529|ref|ZP_02958053.1| threonyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC
           33697]
 gi|186701866|ref|ZP_02971526.1| threonyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC
           27818]
 gi|13959578|sp|Q9PPV6|SYT_UREPA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|189083629|sp|B1AJH5|SYT_UREP2 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|11271125|pir||H82878 threonyl-tRNA synthetase UU534 [imported] - Ureaplasma urealyticum
 gi|6899538|gb|AAF30947.1|AE002152_6 threonyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|168827446|gb|ACA32708.1| threonyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           27815]
 gi|171902899|gb|EDT49188.1| threonyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC
           27813]
 gi|182675966|gb|EDT87871.1| threonyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC
           33697]
 gi|186701170|gb|EDU19452.1| threonyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC
           27818]
          Length = 580

 Score =  400 bits (1027), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 213/580 (36%), Positives = 343/580 (59%), Gaps = 26/580 (4%)

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSD---ELAQIEKKMQEI 129
           + HS AH++A A+   +P + +AIGP I++GFYYDF+   P +S    +L +IEK+M++I
Sbjct: 8   LNHSAAHLLAMALTKFYPNLSLAIGPTIDEGFYYDFNLNDPNTSITPLDLLKIEKEMKKI 67

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
             +   F  + +++EKA+ELF+  K  YK++I+E      ++++Y  G+WFDLC+GPHV+
Sbjct: 68  TTQALTFDYEQVTYEKAKELFKHNK--YKLDIIEQ-NKNNSLSIYHSGKWFDLCKGPHVQ 124

Query: 190 STGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKL 249
           +T ++K   KL+ +AG+YWRGD+N   L RIYG A++ Q +L  YL  L+E ++RDHRK+
Sbjct: 125 NTKEIKAI-KLLNIAGSYWRGDANNDQLIRIYGVAFSDQDQLDAYLKDLQERKERDHRKI 183

Query: 250 AREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQ 307
            ++++LF      G G+  W   G  I   +  ++   + + +++ + TP +    L++ 
Sbjct: 184 GKDLNLFTFNNLAGQGLPIWLPNGTIIKNQVQKFINEVEFQFNFDTVITPILGSIDLYKT 243

Query: 308 SGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGS 367
           SGHWD Y+ N+F+    D+ I       L+PM CP H  V+++ L+SYR LP+RL+E   
Sbjct: 244 SGHWDHYKDNIFSPVQIDNEI-----LVLRPMTCPHHTLVYSNELRSYRSLPIRLSEHSI 298

Query: 368 VYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKL 427
           ++R E SG L G  RVR    +D HVFC  +Q+ +E +    +I    +  G +   + L
Sbjct: 299 LHRYESSGGLTGFERVREMILEDCHVFCRFDQIEHEVINAFKMIQEAQEGLGIKTFEIHL 358

Query: 428 STR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           S       EK      +W+ ++N+++ +L          I    ++GE AFYGPK ++ +
Sbjct: 359 SLNDPNDKEKYYDDPQMWEQSQNVLRKML------KDHNIPYKEMVGEAAFYGPKIDFQV 412

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           K  + R     TIQ+DF LP+RFN  Y+N  +E+  PVMIH  + G+ ER + I++E  K
Sbjct: 413 KTVLNRIITVSTIQLDFLLPNRFNLTYINESNEQSVPVMIHIGIIGTYERLLAILLEQTK 472

Query: 544 GNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
           G LPLWLSPIQ ++  +  +   +Y +E+   L+ H +    D RNE ++ KIRE  I+K
Sbjct: 473 GILPLWLSPIQVVIIPVNENLHTDYVKELNIKLRKHLIRSNVDLRNERLSKKIREAQIQK 532

Query: 603 IPIIIICGDKE-ASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           IP  I+ GD+E  + + +  R +GS  T  VS+ D I +L
Sbjct: 533 IPYQIVIGDEEIKNNKMVTYRCYGSEKTTTVSITDFINML 572


>gi|209879794|ref|XP_002141337.1| threonyl-tRNA synthetase family protein [Cryptosporidium muris
           RN66]
 gi|209556943|gb|EEA06988.1| threonyl-tRNA synthetase family protein [Cryptosporidium muris
           RN66]
          Length = 743

 Score =  400 bits (1027), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 238/700 (34%), Positives = 377/700 (53%), Gaps = 69/700 (9%)

Query: 5   IKLTFPDGSIKNFPVHATGS-DVAESISRSLAKKAVAVAI-------------------- 43
           I +T  DGSI++     T   D+A++IS+ L ++ +   I                    
Sbjct: 60  ISITLADGSIRSGIRFLTSPMDIAKTISKRLVEECIVANIRYITPIESNISVIETDFEEC 119

Query: 44  ----------NGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEV 92
                       K+ D++ P+  +  ++++  +   + +V  HS AHI+ + +++ +  +
Sbjct: 120 LTSNYDKDIQGWKLWDMTRPLETDCELKLLKFDTLEAKSVFWHSSAHILGQCMENEFGSL 179

Query: 93  QVAIGPIIEDGFYYD-FDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFE 151
            + IGP +  GFYYD +      S D+   IE+  +++I+    F +   S E+A ELF+
Sbjct: 180 -LTIGPALSPGFYYDSYMGNNSVSKDDYPIIEQCAKKVISEKQSFERLVCSKEEALELFQ 238

Query: 152 SKKEAYKVEILES-IPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRG 210
                +K+ ++ S +P     T+YR G + DLC GPHV  TG +K F K+ K +   W G
Sbjct: 239 DN--PFKLSLISSKVPENGKTTVYRCGNFIDLCMGPHVPHTGIIKAF-KITKNSACNWLG 295

Query: 211 DSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWH 269
            +    L R+YG ++  ++ L  Y+ FLEE +KRDHR +   ++LF    + S G  FW 
Sbjct: 296 CTENDSLQRVYGISYPDKKSLDDYIEFLEEVKKRDHRVIGSNLNLFFFDTNASVGSCFWL 355

Query: 270 RKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTI 328
             G +I+  +I ++R + +   +EE+ TP +    LW+ SGH+ +Y+ NMF  +      
Sbjct: 356 PPGARIYNKMIEFIRSEYRIRGFEEVVTPNIFSCDLWKTSGHYFAYKENMFLFEV----- 410

Query: 329 KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQ 388
            + + + LKPMNCPGH  +F H   SY++LP+R+A+FG ++RNE SG+L+GL RVR F Q
Sbjct: 411 -EKKEWGLKPMNCPGHCIIFRHMNPSYKQLPIRMADFGVLHRNELSGALNGLTRVRRFQQ 469

Query: 389 DDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIM 448
           DDAH+FCT EQ+ +E       +  +Y   GF    + L T P++ +G+   W+DAEN +
Sbjct: 470 DDAHIFCTAEQIQSEVFAALEFLFFVYDKLGF-SFNLYLGTMPKEHLGTREKWEDAENSL 528

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
           K  L+  +   Q ++N     G+GAFYGPK + +L DA+ R  QCGTIQ+DF LP RFN 
Sbjct: 529 KLALN--RTGYQWKVNE----GDGAFYGPKIDIMLWDALKRPHQCGTIQLDFQLPIRFNL 582

Query: 509 FYVNSHSEKCH----------------PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
            Y +  +                    PV+IHRA+ GSIER + +++EN  G LP WLSP
Sbjct: 583 QYRSDDNILTEGGDHNLDEELKPGYKRPVIIHRAILGSIERMVAVILENTGGKLPFWLSP 642

Query: 553 IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
            QAIV  I+  + +YA+ I + L      +  D+ + TIN KIRE  + +   ++I G+ 
Sbjct: 643 RQAIVLPISEKSHDYAKSIESELCCMGYDVGADYSSSTINRKIREAQLLQWNFMLIVGEN 702

Query: 613 EASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           EA   SI +R   S+T+Q+  +L  +    K   PP   K
Sbjct: 703 EAKSGSITVRSRDSSTSQRNMILSDLIAEFKLLGPPRSDK 742


>gi|330685703|gb|EGG97342.1| threonine--tRNA ligase [Staphylococcus epidermidis VCU121]
          Length = 523

 Score =  399 bits (1026), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 206/510 (40%), Positives = 314/510 (61%), Gaps = 20/510 (3%)

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K  ++I+  +    ++ ++ ++A+  F  K + YK+E++++IP  ENVTLY QGE+ DLC
Sbjct: 2   KNNEKIVDENHKIERKVVTRDEAKAFF--KDDPYKLELIDAIPEDENVTLYSQGEFTDLC 59

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RG HV ST ++K+F KL+  AGAYWRGDSN  ML RIYGTA+  +++L  +L  LEE ++
Sbjct: 60  RGVHVPSTSKIKEF-KLLSTAGAYWRGDSNNKMLQRIYGTAFFDKKDLKAHLEMLEERKE 118

Query: 244 RDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLD 301
           RDHRK+ ++++LF  ++  G+G+  W   G  I + +  Y+  +++   Y+ + TP + +
Sbjct: 119 RDHRKIGKDLELFANSQLVGAGLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLAN 178

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             L++ SGHWD Y+ +MF     D+T        L+PMNCP H+ V+N+   SYRELP+R
Sbjct: 179 VDLYKTSGHWDHYQEDMFPPMKLDET----EEMVLRPMNCPHHMMVYNNKPHSYRELPIR 234

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AE G+++R E SG++ GL RVRG T +D+H+F   +Q+  E  ++ N+I  +YKDFGFE
Sbjct: 235 IAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVNMIQDVYKDFGFE 294

Query: 422 KIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
               +LS R     EK    D +W+ AEN++K   D +  S ++ I      GE AFYGP
Sbjct: 295 DYRFRLSYRDPEDKEKYFDDDEMWNKAENMIKEAADELGLSYEEAI------GEAAFYGP 348

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  +K A+G++    T Q+DF LP RF   Y+    E   PV+IHR V  ++ERF+  
Sbjct: 349 KLDVQVKTAMGKEETLSTAQLDFLLPERFELTYIGQDGEHHRPVVIHRGVVSTMERFVAF 408

Query: 538 MIENFKGNLPLWLSPIQA-IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           + E  KG  P WL+P Q  I+        +YA+ I + LKS  + +E D RNE + YKIR
Sbjct: 409 LTEETKGAFPTWLAPKQVEIIPVNLDLHYDYAKSIQDELKSQGVRVEIDDRNEKMGYKIR 468

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGS 626
           E  ++KIP  I+ GDKE     + +R++GS
Sbjct: 469 EAQMQKIPYQIVVGDKEVENNEVNVRKYGS 498


>gi|119499848|ref|XP_001266681.1| threonyl-tRNA synthetase, putative [Neosartorya fischeri NRRL 181]
 gi|119414846|gb|EAW24784.1| threonyl-tRNA synthetase, putative [Neosartorya fischeri NRRL 181]
          Length = 737

 Score =  399 bits (1025), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 226/662 (34%), Positives = 359/662 (54%), Gaps = 47/662 (7%)

Query: 4   DIKLTFPDGSIKNFPVHA---TGSDVAESISRSLAKKAVAVAINGK-VCDLSDPV-REGS 58
           ++ L   DG+    P  A   T       + + ++   V   I+GK + DL+ P+ R+ +
Sbjct: 70  NVLLDLGDGNPSPVPAKAWETTPGSFLRDVPKDISANVVLAKIDGKELWDLNRPLERDCT 129

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF---DKEQPFS 115
           +  +  + P    V  HS AH + EA +  +    ++ GP    GF+YD    D      
Sbjct: 130 VSYVLFDSPEGREVFWHSSAHCLGEACECEY-GCLLSHGPPTPQGFFYDMAMPDNRVVRE 188

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           SD  A ++ +   I      F +  ++ E  +++F   K  YK+  ++ +   E  T+YR
Sbjct: 189 SDWPA-LDSRASRIFKEKQSFDRLEVTKENLKKMFAYSK--YKLHYIDKLVTGEKSTVYR 245

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
            G   DLCRGPH+++TG++K F K+M+ + AY+ GD     L RI G A+  ++++ ++L
Sbjct: 246 CGTLVDLCRGPHIQNTGKIKTF-KIMQNSSAYFLGDQTNDSLQRIRGVAFPDKKQMQEHL 304

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEI 294
            FLEE+EKR+H ++ ++ +LF   E   G  F    G KIF  L + +R +  K  Y+E+
Sbjct: 305 KFLEEAEKRNHLRIGKDQELFFFDEVSPGCPFLLPNGTKIFNALQALLRAEYRKRGYQEV 364

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
            TP + D  +W++SGHW  Y+ +MF +        + R +ALKPMNCPGH  +F H  +S
Sbjct: 365 QTPNMYDVGIWKRSGHWAHYKDDMFKLDV------EKREWALKPMNCPGHFVLFGHRERS 418

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YRELP+R+A+FG ++RNE SG+L GL RVR F QDD H+FCT++Q+ +E   + + + SI
Sbjct: 419 YRELPLRIADFGVLHRNEASGALSGLTRVRKFQQDDTHIFCTQDQIASEIEGLFDFLQSI 478

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           Y  FGF    +KLSTRPEK +G    W+ AE  +K  +   K       +  +  G+GAF
Sbjct: 479 YGLFGF-TFKLKLSTRPEKYLGELETWNYAEEQLKSAMTKFKGK-----DWTIDEGDGAF 532

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN----------SHSE-------- 516
           YGPK +  + DA+ R++QC TIQ+D+  P  F   Y+           S +E        
Sbjct: 533 YGPKIDITIADALKREFQCATIQLDYQAPINFKLEYMTNEKGQAVMEESKTEGETKSNEP 592

Query: 517 ---KCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIAN 573
              +  PV+IHRA+ GS ERF+GI+IE+F G  P W+SP Q ++  +  +  +Y +E+  
Sbjct: 593 GPGRARPVVIHRAIIGSFERFLGILIEHFGGKWPFWISPRQILIVPVMPAVNDYVEELQQ 652

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
           +L+   L+++ D    T+  KIR   + +   I + G +E   RS+ IR      TQ   
Sbjct: 653 ILRGDKLNVDIDISGNTMQKKIRTGQLAQYNFIFVVGAQEKESRSVNIRNRDDPATQNKG 712

Query: 634 LL 635
           ++
Sbjct: 713 VM 714


>gi|301767961|ref|XP_002919352.1| PREDICTED: threonyl-tRNA synthetase, mitochondrial-like [Ailuropoda
           melanoleuca]
          Length = 718

 Score =  399 bits (1025), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 225/635 (35%), Positives = 347/635 (54%), Gaps = 28/635 (4%)

Query: 5   IKLTFPDGS-IKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEII 62
           IK++ P G  +     + T   +A+ IS +LA  AVA  +NG++ DL  P+   S +  +
Sbjct: 61  IKISLPGGQKVDAVAWNTTPYQLAKHISSTLADMAVAAQVNGELYDLERPLETDSDLRFL 120

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF--DKEQPFSSDELA 120
           T       AV  HS  H++  A + +   V +  GP  E GFY+DF   KE+     EL 
Sbjct: 121 TFSSAEGKAVFWHSSTHVLGAAAEQLLGAV-LCRGPSTECGFYHDFFLGKERTVRGSELP 179

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            +E+  QE+ A   PF +  +S ++ R+LF  K   +K+ +++        T+Y  G   
Sbjct: 180 ALERICQELAAAAQPFRRLEVSQDQLRQLF--KDNPFKLRLIKEKVTGPTATVYGCGMLV 237

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLC+GPH+R TGQ+    KL+  + + WR       L R+ G ++ T +EL  +  + EE
Sbjct: 238 DLCQGPHLRHTGQIGGL-KLLTNSSSLWRSSGASETLQRVSGISFPTAKELRAWEEWKEE 296

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQV 299
           +E RDHR++ +  +LF   E   G  F+  +G +++ TL++++R +  +  + E+ TP +
Sbjct: 297 AELRDHRRIGKAQELFFFHELSPGSCFFLPRGTRVYNTLVAFIRAEYTRRGFSEVKTPTL 356

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADD-----------TIKDLRTFALKPMNCPGHVAVF 348
               LW+ SGHW+ Y+ +MF ++               T     T ALKPMNCP H  +F
Sbjct: 357 FSAKLWELSGHWEHYQEDMFTLQPPGSDRLASSPSDHPTSHPTDTLALKPMNCPAHCLMF 416

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
            H  +S+RELP+RLA+FG+++R E SGSL GL R+R F QDDAH+FC  +Q+  E     
Sbjct: 417 AHRPRSWRELPLRLADFGALHRAEASGSLGGLTRLRCFQQDDAHIFCAPDQLEAEIRSCL 476

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
           + + S+Y   GF    + LSTRP   +G   +WD AE +++  L+         +N G  
Sbjct: 477 DFLRSVYAVLGF-SFRLALSTRPSGFLGEPCVWDQAEQVLQRALEEFGEPWD--LNPG-- 531

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
             +GAFYGPK +  L+DA+GR  QCGTIQ+DF LP RF   Y         PV+IHRAV 
Sbjct: 532 --DGAFYGPKIDVHLRDALGRPHQCGTIQLDFQLPLRFGLQYKGQAGVPERPVLIHRAVL 589

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR- 587
           GS+ER +G++ E+  G  PLWLSP Q +V  + +   EYA+E+   L++  L  + D   
Sbjct: 590 GSVERMLGVLAESCGGKWPLWLSPFQVVVIPVGTEQEEYAREVQQRLQAAGLVCDLDADL 649

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
             T++ ++R   +       + G KE S+R++ IR
Sbjct: 650 GLTLSRRVRRAQLTHYNFQFVVGQKEQSKRTVNIR 684


>gi|281352894|gb|EFB28478.1| hypothetical protein PANDA_008019 [Ailuropoda melanoleuca]
          Length = 718

 Score =  399 bits (1024), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 225/635 (35%), Positives = 347/635 (54%), Gaps = 28/635 (4%)

Query: 5   IKLTFPDGS-IKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEII 62
           IK++ P G  +     + T   +A+ IS +LA  AVA  +NG++ DL  P+   S +  +
Sbjct: 61  IKISLPGGQKVDAVAWNTTPYQLAKHISSTLADMAVAAQVNGELYDLERPLETDSDLRFL 120

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF--DKEQPFSSDELA 120
           T       AV  HS  H++  A + +   V +  GP  E GFY+DF   KE+     EL 
Sbjct: 121 TFSSAEGKAVFWHSSTHVLGAAAEQLLGAV-LCRGPSTECGFYHDFFLGKERTVRGSELP 179

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            +E+  QE+ A   PF +  +S ++ R+LF  K   +K+ +++        T+Y  G   
Sbjct: 180 ALERICQELAAAAQPFRRLEVSQDQLRQLF--KDNPFKLRLIKEKVTGPTATVYGCGMLV 237

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLC+GPH+R TGQ+    KL+  + + WR       L R+ G ++ T +EL  +  + EE
Sbjct: 238 DLCQGPHLRHTGQIGGL-KLLTNSSSLWRSSGASETLQRVSGISFPTAKELRAWEEWKEE 296

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQV 299
           +E RDHR++ +  +LF   E   G  F+  +G +++ TL++++R +  +  + E+ TP +
Sbjct: 297 AELRDHRRIGKAQELFFFHELSPGSCFFLPRGTRVYNTLVAFIRAEYTRRGFSEVKTPTL 356

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADD-----------TIKDLRTFALKPMNCPGHVAVF 348
               LW+ SGHW+ Y+ +MF ++               T     T ALKPMNCP H  +F
Sbjct: 357 FSAKLWELSGHWEHYQEDMFTLQPPGSDRLASSPSDHPTSHPTDTLALKPMNCPAHCLMF 416

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
            H  +S+RELP+RLA+FG+++R E SGSL GL R+R F QDDAH+FC  +Q+  E     
Sbjct: 417 AHRPRSWRELPLRLADFGALHRAEASGSLGGLTRLRCFQQDDAHIFCAPDQLEAEIRSCL 476

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
           + + S+Y   GF    + LSTRP   +G   +WD AE +++  L+         +N G  
Sbjct: 477 DFLRSVYAVLGF-SFRLALSTRPSGFLGEPCVWDQAEQVLQRALEEFGEPWD--LNPG-- 531

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
             +GAFYGPK +  L+DA+GR  QCGTIQ+DF LP RF   Y         PV+IHRAV 
Sbjct: 532 --DGAFYGPKIDVHLRDALGRPHQCGTIQLDFQLPLRFGLQYKGQAGVPERPVLIHRAVL 589

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR- 587
           GS+ER +G++ E+  G  PLWLSP Q +V  + +   EYA+E+   L++  L  + D   
Sbjct: 590 GSVERMLGVLAESCGGKWPLWLSPFQVVVIPVGTEQEEYAREVQQRLQAAGLVCDLDADL 649

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
             T++ ++R   +       + G KE S+R++ IR
Sbjct: 650 GLTLSRRVRRAQLTHYNFQFVVGQKEQSKRTVNIR 684


>gi|218200880|gb|EEC83307.1| hypothetical protein OsI_28676 [Oryza sativa Indica Group]
          Length = 716

 Score =  399 bits (1024), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 226/647 (34%), Positives = 358/647 (55%), Gaps = 53/647 (8%)

Query: 5   IKLTFPDGSIKNFPVH-ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIEI-- 61
           I++T PDG++K+     +T  D+A+ IS  LA   +   +NG + D++ P+ EG  E+  
Sbjct: 111 IRITLPDGAVKDGKKWISTPMDIAKEISSGLANSCLIAQVNGTLWDMTRPL-EGDCELKL 169

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE--DGFYYD-FDKEQPFSSDE 118
              +         HS AHI+ E+++  +   ++ IGP     +GFYYD +  +   +   
Sbjct: 170 FKFDSNEGRDTFWHSSAHILGESLERAYG-CKLCIGPCTTRGEGFYYDAYYNDLTLNETH 228

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
              I+ + Q+ +A   PF +  +S  +A E+F   K  +KVEI+  +P  + +T+YR G 
Sbjct: 229 FGIIDAQAQKAVAEKQPFERIEVSRAEALEMFAENK--FKVEIINELPEDKTITVYRCGP 286

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLCRGPH+ +T  VK F   +K + +YWRG ++R  L R+YG ++   + L +Y + L
Sbjct: 287 LVDLCRGPHIPNTSFVKAF-ACLKASSSYWRGKADRESLQRVYGISFPDSKRLKEYKHLL 345

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE++KRDHR L +  DLF   +   G  F+   G  I+  L+ ++R++ +D  Y+E+ +P
Sbjct: 346 EEAKKRDHRLLGQTQDLFFFHQLSPGSCFFLPHGAIIYNKLMDFLRQQYRDRGYQEVLSP 405

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  LW+ SGH  +Y+ NMF  +       + + F LKPMNCPGH  +F H ++SYRE
Sbjct: 406 NIYNMQLWETSGHAANYKENMFVFEI------EKQEFGLKPMNCPGHCLMFEHRVRSYRE 459

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+A+FG ++RNE SG+L GL RVR F QDDAH+FC + Q+ +E   + + I  +Y+ 
Sbjct: 460 LPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCRESQIKDEVKAVLDFINYVYEI 519

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF K  ++LSTRPEK +G    W+ AE  +   L+      Q  IN     G+GAFYGP
Sbjct: 520 FGF-KYELELSTRPEKYLGDIETWNKAEQQLTEALNEFGKPWQ--INE----GDGAFYGP 572

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  + DA+ R +QC T+Q                            A+ GS+ER   I
Sbjct: 573 KIDIGVFDALKRKFQCATLQ----------------------------AILGSVERMFAI 604

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           ++E++ G  PLWLSP QAIV +I+S++VEYA+++   +      +  D  + TI  K+RE
Sbjct: 605 LLEHYNGKWPLWLSPRQAIVCSISSNSVEYAKQVRARIHEAGFHVAIDETDRTIQKKVRE 664

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
             + +   I++ G +EA    + +R         VS+ D I    +E
Sbjct: 665 AQLAQFNYILVVGAQEAETGQVSVRVRDKAELATVSIDDIITRFKEE 711


>gi|226293450|gb|EEH48870.1| threonyl-tRNA synthetase [Paracoccidioides brasiliensis Pb18]
          Length = 738

 Score =  399 bits (1024), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 219/639 (34%), Positives = 350/639 (54%), Gaps = 52/639 (8%)

Query: 25  DVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIRHSCAHIMAE 83
           D+ + IS ++    VA   + ++ DL  P+ R+  +  +  +      V  HS AH++ E
Sbjct: 91  DIPKEISSTVV---VAKLDDKELWDLDRPLERDCRVSFLPFDSSEGREVFWHSSAHVLGE 147

Query: 84  AVQSIWPEVQVAIGPIIEDGFYYDFDKE--QPFSSDELAQIEKKMQEIIARDSPFLKQYL 141
           A +  +    ++ GP    GF+YD   E        +   ++ K   I     PF +  +
Sbjct: 148 ACECYY-GCLLSHGPPTPQGFFYDMALEPGHVVKESDWPALDSKSVRIFKEKQPFDRLEV 206

Query: 142 SHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLM 201
           S E  +++F   K  +K+  + ++   E+ T+YR G   DLCRGPH+++TG++K   K+M
Sbjct: 207 SKENLKKMFAYSK--FKLHYINNLVEGESSTVYRCGTLVDLCRGPHIQNTGKIK-VMKIM 263

Query: 202 KVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED 261
           + + AY+ GD +   L RI G A+  ++++ ++L FLEE+EKR+H ++ +E DLF   E 
Sbjct: 264 QNSAAYFLGDQSNDTLQRIRGVAFPDKKQMQEHLKFLEEAEKRNHLRIGKEQDLFFFDEV 323

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
             G  F    G KI   L S +R +  K  Y+E+ +P + D  +W+QSGHW  Y+ +MF 
Sbjct: 324 SPGCPFLLPNGTKIINALQSLLRAEYRKRGYQEVQSPNMYDVGIWRQSGHWAHYKDDMFK 383

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +        + R +ALKPMNCPGH  +F H  +SYRELP+R+A+FG ++RNE SG+LHGL
Sbjct: 384 LDV------EKREWALKPMNCPGHAVMFGHRERSYRELPLRIADFGVLHRNEASGALHGL 437

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            RVR F QDD H+FCT++Q+  E   + + + S+Y  FGF    +KLSTRPEK +G    
Sbjct: 438 TRVRKFQQDDTHIFCTEDQIMQEIDGLFDFLRSVYGLFGF-SFKLKLSTRPEKYMGKLET 496

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDF 500
           W+ AE  ++  L   K +  +     V  G+GAFYGPK +  ++DA+ R++QC TIQ+D+
Sbjct: 497 WNYAEEQLRAALTKFKGNDWE-----VDEGDGAFYGPKIDITIQDALKREFQCATIQLDY 551

Query: 501 NLPSRFNAFYVNSHS-----------------------------EKCHPVMIHRAVFGSI 531
            +P  F   Y+   +                              +  PV+IHRA+ GS 
Sbjct: 552 QMPVNFKLEYMTGETGAKAKPADKTTEDAANPDAPSTSSNEPGPGRARPVVIHRAIIGSF 611

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           ERF+GI+IE+F G  P WLSP Q ++  +  +  +Y +E+  +L+   L+++ D    T+
Sbjct: 612 ERFLGIIIEHFGGKWPFWLSPRQILIVPVMPAVNDYVEELREILRGDKLNVDIDISGNTM 671

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
             KIR   I +   I + G +E + R++ IR     ++Q
Sbjct: 672 QKKIRSGQIAQYNFIFVVGAQEKATRTVNIRNRDDPSSQ 710


>gi|58700004|ref|ZP_00374566.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|58533480|gb|EAL57917.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
          Length = 342

 Score =  398 bits (1023), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 182/353 (51%), Positives = 251/353 (71%), Gaps = 12/353 (3%)

Query: 253 MDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHW 311
           MDLFHI E+  G +FWH +G+ ++  L SY+R+K I + Y E+ TP ++ + LW++SGHW
Sbjct: 1   MDLFHIQEEAVGQVFWHEQGYILYNVLESYIRKKLINNGYFEVKTPILVSKELWEKSGHW 60

Query: 312 DSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRN 371
           D +R NMF V  ++      +  A+KPMNCP HV +FN   +SYR+LP+R+AEFG+ +RN
Sbjct: 61  DKFRENMFIVDESES-----KKLAIKPMNCPCHVQIFNSHTRSYRDLPIRMAEFGTCHRN 115

Query: 372 EPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP 431
           E SGSLHGLMRVRGFTQDDAH+FC +EQ+ +E +K  +L+  +Y + GF +I VK S RP
Sbjct: 116 ESSGSLHGLMRVRGFTQDDAHIFCMEEQVNSETIKFCDLLKEVYSELGFNEISVKFSDRP 175

Query: 432 EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDW 491
           + R G D +WD AE   K +L+ +K +    ++  +  GEGAFYGPK E++LKDAIGR W
Sbjct: 176 DVRAGDDEVWDRAE---KALLEAVKEAG---LSYELSPGEGAFYGPKLEFVLKDAIGRSW 229

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLS 551
           QCGT+QVDF LP R  AFY+ +   K HPVM+HRA+ G+ ERFIGI+IEN+ G  P+WL+
Sbjct: 230 QCGTLQVDFILPERLGAFYIGADGHKHHPVMLHRAILGTFERFIGILIENYAGKFPVWLA 289

Query: 552 PIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
           P Q  + TIT+ A  YA +I+N+LK   + ++TD  NE I+YKIR HS+ K+P
Sbjct: 290 PTQLAILTITNEADGYATKISNVLKEQGVRVKTDLTNEKISYKIRLHSLNKVP 342


>gi|225684056|gb|EEH22340.1| threonyl-tRNA synthetase [Paracoccidioides brasiliensis Pb03]
          Length = 738

 Score =  398 bits (1023), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 219/639 (34%), Positives = 350/639 (54%), Gaps = 52/639 (8%)

Query: 25  DVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIRHSCAHIMAE 83
           D+ + IS ++    VA   + ++ DL  P+ R+  +  +  +      V  HS AH++ E
Sbjct: 91  DIPKEISSTVV---VAKLDDKELWDLDRPLERDCRVSFLPFDSSEGREVFWHSSAHVLGE 147

Query: 84  AVQSIWPEVQVAIGPIIEDGFYYDFDKE--QPFSSDELAQIEKKMQEIIARDSPFLKQYL 141
           A +  +    ++ GP    GF+YD   E        +   ++ K   I     PF +  +
Sbjct: 148 ACECYY-GCLLSHGPPTPQGFFYDMALEPGHVVKESDWPALDSKSVRIFKEKQPFDRLEV 206

Query: 142 SHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLM 201
           S E  +++F   K  +K+  + ++   E+ T+YR G   DLCRGPH+++TG++K   K+M
Sbjct: 207 SKENLKKMFAYSK--FKLHYINNLIEGESSTVYRCGTLVDLCRGPHIQNTGKIK-VMKIM 263

Query: 202 KVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED 261
           + + AY+ GD +   L RI G A+  ++++ ++L FLEE+EKR+H ++ +E DLF   E 
Sbjct: 264 QNSAAYFLGDQSNDTLQRIRGVAFPDKKQMQEHLKFLEEAEKRNHLRIGKEQDLFFFDEV 323

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
             G  F    G KI   L S +R +  K  Y+E+ +P + D  +W+QSGHW  Y+ +MF 
Sbjct: 324 SPGCPFLLPNGTKIINALQSLLRAEYRKRGYQEVQSPNMYDVGIWRQSGHWAHYKDDMFK 383

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +        + R +ALKPMNCPGH  +F H  +SYRELP+R+A+FG ++RNE SG+LHGL
Sbjct: 384 LDV------EKREWALKPMNCPGHAVMFGHRERSYRELPLRIADFGVLHRNEASGALHGL 437

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            RVR F QDD H+FCT++Q+  E   + + + S+Y  FGF    +KLSTRPEK +G    
Sbjct: 438 TRVRKFQQDDTHIFCTEDQIMQEIDGLFDFLRSVYGLFGF-SFKLKLSTRPEKYMGKLET 496

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDF 500
           W+ AE  ++  L   K +  +     V  G+GAFYGPK +  ++DA+ R++QC TIQ+D+
Sbjct: 497 WNYAEEQLRAALTKFKGNDWE-----VDEGDGAFYGPKIDITIQDALKREFQCATIQLDY 551

Query: 501 NLPSRFNAFYVNSHS-----------------------------EKCHPVMIHRAVFGSI 531
            +P  F   Y+   +                              +  PV+IHRA+ GS 
Sbjct: 552 QMPVNFKLEYMTGETGAKAKPADKTTEDAANPDAPSTSSNEPGPGRARPVVIHRAIIGSF 611

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           ERF+GI+IE+F G  P WLSP Q ++  +  +  +Y +E+  +L+   L+++ D    T+
Sbjct: 612 ERFLGIIIEHFGGKWPFWLSPRQILIVPVMPAVNDYVEELREILRGDKLNVDIDISGNTM 671

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
             KIR   I +   I + G +E + R++ IR     ++Q
Sbjct: 672 QKKIRSGQIAQYNFIFVVGAQEKATRTVNIRNRDDPSSQ 710


>gi|156086662|ref|XP_001610740.1| threonyl-tRNA synthetase [Babesia bovis T2Bo]
 gi|154797993|gb|EDO07172.1| threonyl-tRNA synthetase, putative [Babesia bovis]
          Length = 736

 Score =  398 bits (1023), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 225/612 (36%), Positives = 338/612 (55%), Gaps = 32/612 (5%)

Query: 49  DLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD 107
           DL  P+  + ++   T E P+   V  HS AH++  A+++++    + IGP +  GFYYD
Sbjct: 128 DLYRPLECDCTVRFHTFESPKGQHVFWHSSAHLLGSALETLYG-AYITIGPALSQGFYYD 186

Query: 108 -FDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESI 165
            +     F  D++A I +++  +    SPF +   S E+A EL   K   +KVE++ + +
Sbjct: 187 CYLGNNTFKPDDMALITEQVSTVTKTKSPFQRLVCSKEEALELM--KHNPFKVELIRKKV 244

Query: 166 PAKENVTLYRQGEWFDLCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTA 224
           P   +   YR G++ DLCRGPH+  T  V  K   + K +  YW   +    L R+YG +
Sbjct: 245 PDGSSTVCYRCGDFVDLCRGPHLPFTTSVHHKAMTVTKFSSCYWLSKNTADSLQRVYGIS 304

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM 283
           +  + +L  Y   +E+++  DHR L   ++LFH     S G  FW   G KI+  L+ +M
Sbjct: 305 FPKEAQLKAYERRIEDAKANDHRLLGTTLNLFHFDNIHSPGSCFWLPNGAKIYNRLVDFM 364

Query: 284 RRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
           R   +   Y+E+ TP +    LW+ SGH+D+Y+ NM+          D   + +K MNCP
Sbjct: 365 RENYRLRGYQEVITPNIYSCELWKTSGHYDNYKENMYMFTV------DEAEWGMKGMNCP 418

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN 402
           GH  +F H   SYR+LP+R A+FG ++RNE +GSL GL RVR F QDDAH+FCT EQ+  
Sbjct: 419 GHCLMFKHMNPSYRQLPLRFADFGVLHRNELTGSLSGLTRVRRFQQDDAHIFCTPEQISA 478

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD- 461
           E L +   I  +Y  F FE    KLST+P K +G D LW+ AE    G+ D ++   +  
Sbjct: 479 EVLSMLKFIDDVYSLFNFE-YNFKLSTKPAKALGDDELWNKAE---AGLQDALEKCGRPW 534

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK---- 517
            +N     G+GAFYGPK + IL D++ R+ QCGT+Q+DFNLP RFN  Y +  SE     
Sbjct: 535 TLNP----GDGAFYGPKIDVILLDSLEREHQCGTVQLDFNLPIRFNLGYRDKDSEDNTDC 590

Query: 518 ----CHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIAN 573
                 PV++HRA+FGS+ERFI I+IE+ KG LP WLSP Q  V  I+   ++YA +I  
Sbjct: 591 KRGYSRPVIVHRAIFGSLERFIAIVIEHMKGKLPFWLSPTQVAVLPISDKHLDYANKIYR 650

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            L     +   D    T+N KI+ +  ++   ++I GD+E    ++ +R   S   + ++
Sbjct: 651 KLLHLGYNCYVDSSANTMNKKIKLNQAQRYNYMLILGDREVETETVSVRAMDSQDNEVLT 710

Query: 634 LLDAIPILTKES 645
           L      L  E+
Sbjct: 711 LEQLYAKLADEA 722


>gi|297297312|ref|XP_001086926.2| PREDICTED: probable threonyl-tRNA synthetase 2, cytoplasmic-like
           [Macaca mulatta]
          Length = 708

 Score =  398 bits (1023), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 226/607 (37%), Positives = 333/607 (54%), Gaps = 48/607 (7%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAH 79
            T   VA  IS+ LA+  V   +NG++ DL  P+  + S+E++T ++  + AV  HS AH
Sbjct: 111 TTPYQVAAEISQELAESTVIAKVNGELWDLDRPLEGDSSLELLTFDNEEAQAVYWHSSAH 170

Query: 80  IMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQIEKKMQEIIARDSPFLK 138
           I+ EA++ ++    +  GP IE+GFYYD F +++  SS EL+ +E   + II    PF +
Sbjct: 171 ILGEAME-LYYGGHLCYGPPIENGFYYDMFIEDRAVSSTELSALENICKAIIKEKQPFER 229

Query: 139 QYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFF 198
             +S E   E+F+  K  +K  IL         T+YR G   DLC+GPHVR TG++K   
Sbjct: 230 LEVSKEILLEMFKYNK--FKCRILNEKVDTATTTVYRCGPLIDLCKGPHVRHTGKIKTI- 286

Query: 199 KLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI 258
           K+ K +  YW G+     L RIYG ++   + +  +  F EE++ RDHRK+ +E +LF  
Sbjct: 287 KIFKNSSTYWEGNPEMETLQRIYGISFPDNKMMRNWEKFQEEAKNRDHRKIGKEQELFFF 346

Query: 259 AEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRAN 317
            +   G  F+  +G  I+ TL+ ++R +  K D+ E+ +P + +  LW+ SGHW  Y  N
Sbjct: 347 HDLSPGSCFFLPRGAFIYNTLMDFIREEYHKRDFTEVLSPNMYNSKLWEASGHWQHYSEN 406

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           MF  +   DT      FALKPMNCPGH  +F H  +S+RE+P+R A+FG ++RNE SG+L
Sbjct: 407 MFTFEIEKDT------FALKPMNCPGHCLMFAHRPRSWREMPMRFADFGVLHRNELSGTL 460

Query: 378 HGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGS 437
            GL RVR F QDDAH+FCT EQ+  E       + S+Y  FGF    + LSTRPE  +G 
Sbjct: 461 SGLTRVRRFQQDDAHIFCTVEQIEEEIKGCLQFLQSVYSTFGF-SFQLNLSTRPENFLGE 519

Query: 438 DALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ 497
             +W++AE                                K       AIGR  QC TIQ
Sbjct: 520 IEMWNEAE--------------------------------KXXXXXXXAIGRYHQCATIQ 547

Query: 498 VDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI 556
           +DF LP RFN  YV+    +K  PV+IHRA+ GS+ER I I+ EN+ G  P WLSP Q +
Sbjct: 548 LDFQLPIRFNLTYVSKDGDDKKRPVIIHRAILGSVERMIAILSENYGGKWPFWLSPRQVM 607

Query: 557 VTTITSSAVEYAQEIANLLKSHHLSIETDF-RNETINYKIREHSIKKIPIIIICGDKEAS 615
           V  +  +  +YA ++++         + D   N T+N KIR   + +   I++ G+KE  
Sbjct: 608 VIPVGPTCEKYALQVSSEFFEEGFMADVDLDHNCTLNKKIRNAQLAQYNFILVVGEKEKI 667

Query: 616 ERSIGIR 622
             ++ +R
Sbjct: 668 NNAVNVR 674


>gi|255947314|ref|XP_002564424.1| Pc22g03830 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211591441|emb|CAP97671.1| Pc22g03830 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 741

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 228/655 (34%), Positives = 353/655 (53%), Gaps = 40/655 (6%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
           DI    P  S+       T       + + L+   V   +NG++ DL+ P+ ++ S+ ++
Sbjct: 81  DIGDGNPPSSVPAKAFETTPGSFLRDVPKDLSANIVIAKVNGELWDLNRPLEKDCSVLLV 140

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF---DKEQPFSSDEL 119
              +P +     HS AH++  A +  +    ++ GP    GF+YD    D      +D  
Sbjct: 141 PFSNPEARETFFHSSAHVLGLASECEY-GCLLSHGPPTPQGFFYDMAMPDGRVVREADWK 199

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A ++ +          F +  +S E  +++F   K  YK+  ++ +   E+ T+YR G  
Sbjct: 200 A-LDIRASRSFKEKQSFDRLEVSKENLKKMFAYSK--YKLHYIDKLVTGESSTVYRNGTL 256

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPH+++TG++K F K+M+ + AY+ GD +   L RI G A+  ++ + ++L FLE
Sbjct: 257 VDLCRGPHIQNTGKIKAF-KIMQNSSAYFLGDQSNDSLQRIRGVAFPDKKLMAEHLKFLE 315

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+EKR+H ++ +E +LF   E   G  F    G KIF  L S +R +  K  Y+E+ TP 
Sbjct: 316 EAEKRNHLRIGKEQELFFFDEASPGCPFLLPNGTKIFNQLQSLLRSEYRKRGYQEVQTPN 375

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           + D  +W+ SGHW  Y+ +MF +        + R +ALKPMNCPGH  +F H  +SYREL
Sbjct: 376 MYDVGVWKTSGHWAHYKDDMFKLDV------EKREWALKPMNCPGHFILFGHRERSYREL 429

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+A+FG ++RNE SG+L GL R R F QDD HV     Q+ +E   + + + SIY  F
Sbjct: 430 PMRIADFGVLHRNEASGALSGLTRCRKFQQDDCHVVLASHQIMSEVEGLFDFLQSIYGLF 489

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF    +KLSTRPEK +G+   WD AE+ +K  L   K      IN     G+GAFYGPK
Sbjct: 490 GF-TFKLKLSTRPEKYMGALETWDHAEDQLKKALTKFKGDDWT-INE----GDGAFYGPK 543

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN---SHSE---------------KCHP 520
            +  + DAI R++QC TIQ+D+  P  F   Y+    S +E               +  P
Sbjct: 544 IDITIADAIQREFQCATIQLDYQAPINFKMEYMTKEQSQAEQPKEGETKGDELAPGRARP 603

Query: 521 VMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHL 580
           V+IHRA+ GS ERF+GI+IE+F G  P W+SP Q ++  +  +  +YA+E+  +L+   L
Sbjct: 604 VVIHRAIIGSFERFLGILIEHFGGKWPFWISPRQILIVPVMPAVNDYAEELQKILQGDKL 663

Query: 581 SIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
           S++ D    T+  KIR   + +   I + G  E   RS+ +R      TQK  ++
Sbjct: 664 SVDIDISGNTMQKKIRTGQLAQYNFIFVVGASERETRSVNVRNRDDPATQKQGVM 718


>gi|295093898|emb|CBK82989.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Coprococcus sp.
           ART55/1]
          Length = 587

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 213/585 (36%), Positives = 354/585 (60%), Gaps = 26/585 (4%)

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPF--SSDE 118
           ++  ++   L  + HSCAH+MA+A++ ++P+ +  +GP++ +GFYYD D         ++
Sbjct: 1   MVNFKEDEQLKTLNHSCAHLMAQAIKHLYPQAKFWVGPVVAEGFYYDVDLGDDVIRGEED 60

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           LA IEK+M++I       +++ +S E+A E+F  K + YK++++  +     +T Y QG+
Sbjct: 61  LAAIEKEMKKIAKSGKKIIRKEISKEEALEMF--KDDEYKLDLINGL-EDGTITCYEQGD 117

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + DLCRGPHV +  ++ + FKL++ +GAYW+GDS   +L RIYG  + T++EL ++L  L
Sbjct: 118 FTDLCRGPHVDNV-KLCRNFKLIRHSGAYWKGDSKNKVLQRIYGVCFPTKEELEEHLQLL 176

Query: 239 EESEKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINT 296
           EE+++RDHRK+ ++M LF + +  G G+  +  KG+ ++Q L +Y++RK  K  Y  + T
Sbjct: 177 EEAKERDHRKIGKDMQLFMVDDLVGRGLPMFLPKGYTVWQELENYIKRKERKLGYLHVMT 236

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P V   +L++ SGHWD Y+ NMF     +       +F L+PMNCP H+ ++ + + SY+
Sbjct: 237 PCVGTVNLYKTSGHWDHYKDNMFPAMEMEG-----ESFVLRPMNCPHHMMIYANKMHSYK 291

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +LP+R+AE    +R E SG+L G+ R R F Q+D+H+F T +Q+  E   +  LI   YK
Sbjct: 292 DLPIRIAEIAHDFRFEASGTLKGIERGRHFCQNDSHIFVTPDQIEEEFAGVVKLIFDTYK 351

Query: 417 DFGFEKIMVKLSTR-PEKRV---GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
           DFG       LS R PE +V     D +W+ AEN ++ VLD I     + I      GE 
Sbjct: 352 DFGITDYRCVLSLRDPEDKVKYHDDDEMWNKAENALRKVLDDIGIDYTEEI------GEA 405

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           AFYGPK +  +K A+G ++   T Q+DF LP++F+  Y++   EK  PV++HRA+ GS++
Sbjct: 406 AFYGPKLDVNVKPAVGNEYTLSTCQLDFCLPAKFDLKYIDKDGEKKTPVVLHRAILGSLD 465

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITS---SAVEYAQEIANLLKSHHLSIETDFRNE 589
           RF+  ++E  KGNLP WL+P+Q  V  + +     + YA ++ + L +  + +E D R E
Sbjct: 466 RFMAYILEETKGNLPTWLAPVQVRVMPVKTDNEDLMAYAHKVVDALDAIDVRVELDDRAE 525

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
            + Y++RE  ++K+P +++ G  EA   ++  R  G   T  + L
Sbjct: 526 KLGYRMREGQVQKVPYLLVIGFNEAENGTVSYRLHGEADTTVLPL 570


>gi|71892130|ref|YP_277862.1| threonyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus
           str. BPEN]
 gi|71796236|gb|AAZ40987.1| threonyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus
           str. BPEN]
          Length = 408

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 175/394 (44%), Positives = 265/394 (67%), Gaps = 13/394 (3%)

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
           +K DHR LA+++ L+H  +D  G++FWH+ GW + Q L   +R ++K+  Y+E+ +P ++
Sbjct: 6   KKNDHRNLAKQLHLYHTQKDAPGMVFWHQNGWILLQELKKIIRTQLKEYKYQEVKSPTMI 65

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  LW+++GHWD+Y  ++F       T  +   + +KPMNCPGH+ +FN G+KSY++LP 
Sbjct: 66  NHTLWKKTGHWDNYHEHIFT------TSSESHEYCIKPMNCPGHIQIFNQGIKSYKDLPY 119

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AEFG+ +RNEPSGSLHGLMR R FTQDD H+FCTK Q+F+E      ++  IY  FGF
Sbjct: 120 RIAEFGNCHRNEPSGSLHGLMRTREFTQDDGHIFCTKTQIFDELNHCIKMMYDIYNTFGF 179

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           + I+VKLSTRP KR+G+D++WD AE  +  VL     S Q + N      +GAFYGPK E
Sbjct: 180 KTILVKLSTRPAKRIGTDSIWDTAEQHLSTVLQHNNISFQYQPN------DGAFYGPKIE 233

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           + L D++ R WQCGTIQ+DF+LP+  NA Y++ H+ +  PVMIHRA+ GS+ERFIG++ E
Sbjct: 234 FALLDSLDRTWQCGTIQLDFSLPNLLNARYIDRHNSRVVPVMIHRAILGSMERFIGLITE 293

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
            + G  P WL+P Q ++  +T    EY   I   L +  +  + D RNE I +KIR +++
Sbjct: 294 EYAGFFPTWLAPTQVVLMNVTDQQSEYVSVIEKKLINKKIRTKVDLRNEKIGFKIRYYTL 353

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           ++IP ++ICG+KE ++ ++ IR +   T +  ++
Sbjct: 354 QRIPYMLICGNKEMNQNTVAIRTYRGQTLKNCNI 387


>gi|313633110|gb|EFS00008.1| threonyl-tRNA synthetase [Listeria seeligeri FSL N1-067]
          Length = 485

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 202/493 (40%), Positives = 305/493 (61%), Gaps = 19/493 (3%)

Query: 159 VEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLS 218
           +E++E+IPA E VT+Y QGE+FDLCRG HV STG+++  FKL+ VAGAYWRGDSN  ML 
Sbjct: 1   LELIEAIPADETVTIYTQGEFFDLCRGVHVPSTGKIQ-VFKLLSVAGAYWRGDSNNKMLQ 59

Query: 219 RIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQ 277
           RIYGTA+  +  L +++   +E+++RDHRKL +E++LF +  E G G+  W  KG  I +
Sbjct: 60  RIYGTAFFDKNGLKEFIQMQKEAKERDHRKLGKELELFTNSIEVGQGLPLWLPKGATIRR 119

Query: 278 TLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFAL 336
            +  Y+  ++ +  Y  + TP + +  L++ SGHWD Y  +MF     D+         L
Sbjct: 120 VIERYIVDKEERLGYNHVYTPIMANVELYKTSGHWDHYHEDMFPTMKMDN-----EELVL 174

Query: 337 KPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT 396
           +PMNCP H+ ++ + + SYRELP+R+AE G ++R E SG+L GL RVRG T +DAHVF  
Sbjct: 175 RPMNCPHHMMIYKNDIHSYRELPIRIAELGMMHRYEMSGALSGLQRVRGMTLNDAHVFVR 234

Query: 397 KEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVL 452
            +Q+ +E  ++  LI+ +YKDF  +    +LS R     EK    DA+WD A+ ++K  +
Sbjct: 235 PDQIKDEFKRVVELILEVYKDFDIKDYSFRLSYRDPKNTEKYFDDDAMWDKAQAMLKSAM 294

Query: 453 DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
           D +     D        GE AFYGPK +  +K AIG++    T+Q+DF LP RF+  Y+ 
Sbjct: 295 DEM---GMDYFEAD---GEAAFYGPKLDVQVKTAIGKEETLSTVQLDFLLPERFDLTYIG 348

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEI 571
              EK  PV+IHR V  ++ERF+  +IE +KG  P WL+P+Q  +  + + A ++YA+ +
Sbjct: 349 EDGEKHRPVVIHRGVVSTMERFVAYLIEEYKGAFPTWLAPVQMELIPVNADAHLDYAKGV 408

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
            + L+   L +E D RNE + YKIRE   KKIP  ++ GD+E    ++ +RR+GS  ++ 
Sbjct: 409 QDKLQRAGLRVEVDDRNEKLGYKIREAQTKKIPYALVLGDQEMESGTVNVRRYGSKDSET 468

Query: 632 VSLLDAIPILTKE 644
           + L   I  + +E
Sbjct: 469 MELDTFISQVVQE 481


>gi|295101322|emb|CBK98867.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Faecalibacterium
           prausnitzii L2-6]
          Length = 594

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 215/582 (36%), Positives = 340/582 (58%), Gaps = 30/582 (5%)

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQI 122
           P+D + L VIRH+ AH+MA+A++ ++PE   A GP  E+GFYYD D  +   + ++LA I
Sbjct: 14  PQD-QELHVIRHTAAHVMAQAIKRLYPEADFAFGPATENGFYYDVDLGDTKLTDEDLANI 72

Query: 123 EKKMQEIIARD---SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           EK+M +I   +    PF+   L   +A +L E + E YKVE +  +  +   + ++QGE+
Sbjct: 73  EKEMHKITKENLAIKPFI---LPRAEAVKLMEERHENYKVEHMADLADETEFSFFQQGEY 129

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            D+C GPH+  T  +K F K+ + +GAYW+ D    ML+RI G A++ Q+EL  +    +
Sbjct: 130 VDMCIGPHLTYTKALKAF-KITQQSGAYWKNDKENRMLTRINGVAFHNQEELDAWEKEQQ 188

Query: 240 ESEKRDHRKLAREMDLFHIAED--GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
           E+ +RDHRK+ +EM LF + +D  G G+  +   G+ ++Q L +Y++ K +   Y  + T
Sbjct: 189 EARERDHRKIGKEMGLF-MTDDLVGRGLPMFLPAGYTVWQELENYIKEKERARGYLHVMT 247

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +   +L++ SGHWD YR NMF     +       ++ L+PMNCP H+ ++ +   SYR
Sbjct: 248 PCIGTVNLYKTSGHWDHYRENMFPAMEMEG-----ESYVLRPMNCPHHMMIYANRPHSYR 302

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +LP+R+ E    +R E SG+L G+ R R F Q+DAH+FCT EQ+ +E   + NLI   YK
Sbjct: 303 DLPMRIGEIAHDFRYESSGTLKGIERGRHFCQNDAHLFCTPEQIKSEVADVCNLIFETYK 362

Query: 417 DFGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
           DF        LS R     +K    DA+W+ AEN ++ VL  +     + I      GE 
Sbjct: 363 DFNITDYRCVLSLRDPADKKKYHDDDAMWNHAENALREVLTELGIHFTEEI------GEA 416

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           AFYGPK +  +K A+G ++   T Q+DF LP++F+  YV+    +  PV++HRA+ GS++
Sbjct: 417 AFYGPKLDVNVKPAVGAEYTLSTCQLDFCLPAKFHLTYVDKDGTEKTPVVLHRAILGSLD 476

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
           RF+  +IE  KG  P WL+P+Q  V  ++   +EY++ I   L    + +  D  N+ I 
Sbjct: 477 RFMAYLIEETKGKFPTWLAPVQVKVLPVSEKTLEYSEAITEKLVEAGVRVALDDDNQKIG 536

Query: 593 YKIR-EHSIKKIPIIIICGDKEASERSIGIR-RFGSTTTQKV 632
           YKIR    + ++P +++ G KEA   ++ +R R G TTT +V
Sbjct: 537 YKIRAAQQVDRVPYMLVLGAKEAEAGNVSVRDRKGETTTMEV 578


>gi|225560803|gb|EEH09084.1| threonyl-tRNA synthetase [Ajellomyces capsulatus G186AR]
          Length = 750

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 219/656 (33%), Positives = 350/656 (53%), Gaps = 62/656 (9%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGK-VCDLSDPV-REGSIEIITPEDPRSLAVIRHSCA 78
            T       I + ++   V   ++GK + DL  P+ R+  +  +  +      V  HS A
Sbjct: 83  TTPGSFLRDIPKEISSTVVIAKLDGKELWDLDRPLERDCRVTFLPFDSIEGREVFWHSSA 142

Query: 79  HIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE--QPFSSDELAQIEKKMQEIIARDSPF 136
           H++ EA +  +    ++ GP    GF+YD   E        +   ++ K   I     PF
Sbjct: 143 HVLGEACECYY-GCLLSHGPPTPQGFFYDMALEPGHVVKESDWPALDTKAARIFKEKQPF 201

Query: 137 LKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKK 196
            +  +S    +++F   K  YK+  + ++   E+ T+YR G   DLCRGPH+++TG++K 
Sbjct: 202 DRLEVSKSDLKKMFAYSK--YKLHYINNLVEGESSTVYRCGTLVDLCRGPHIQNTGKIK- 258

Query: 197 FFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLF 256
             K+M+ + AY+ GD +   L RI G A+  ++++ ++L FLEE+EKR+H ++ ++ DLF
Sbjct: 259 IMKIMQNSAAYFLGDQSNDALQRIRGVAFPDKKQMQEHLKFLEEAEKRNHLRIGKDQDLF 318

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYR 315
              E   G  F    G KIF  L + +R +  K  Y+E+ +P + D  +W+QSGHW  Y+
Sbjct: 319 FFDEVSPGCPFLLPNGTKIFNALQALLRSEYRKRGYQEVQSPNMYDVGIWRQSGHWQHYK 378

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            +MF +        + RT+ALKPMNCPGH  +F H  +SYRELP+R+A+FG ++RNE SG
Sbjct: 379 DDMFKLDI------EKRTWALKPMNCPGHAIMFGHRERSYRELPLRIADFGVLHRNEASG 432

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
           +LHGL RVR F QDD H+FC ++Q+  E   + + + +IY  FGF    +KLSTRPEK +
Sbjct: 433 ALHGLTRVRKFQQDDTHIFCAEDQIMQEIDGLFDFLRAIYGLFGF-SFKLKLSTRPEKYM 491

Query: 436 GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGT 495
           G    W++AE+ ++  +   K +  +     V  G+GAFYGPK +  ++DA+ R++QC T
Sbjct: 492 GKLETWNNAEDQLRAAMTKFKGNDWE-----VDEGDGAFYGPKIDVTIQDALKREFQCAT 546

Query: 496 IQVDFNLPSRFNAFYVNSHS---------------------------------------- 515
           IQ+D+ +P  F   Y+   +                                        
Sbjct: 547 IQLDYQMPVNFKLEYMTGETGAKAKPEEKSAGAPAAKTADKPAGDAAKPDVPPTNSDEPG 606

Query: 516 -EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANL 574
             +  PV+IHRA+ GS ERF GI+IE+F G  P WLSP Q ++  +  +  +Y +E+  +
Sbjct: 607 PGRARPVVIHRAIIGSFERFFGIIIEHFGGKWPFWLSPRQILIVPVMPAVNDYVEELQRI 666

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
           LK   L+++ D    T+  KIR   I +   I + G +E S R++ IR     ++Q
Sbjct: 667 LKEDKLNVDIDISGNTMQKKIRTGQIAQYNFIFVVGAEEKSTRTVNIRNRDDPSSQ 722


>gi|163814284|ref|ZP_02205673.1| hypothetical protein COPEUT_00435 [Coprococcus eutactus ATCC 27759]
 gi|158449919|gb|EDP26914.1| hypothetical protein COPEUT_00435 [Coprococcus eutactus ATCC 27759]
          Length = 587

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 213/585 (36%), Positives = 354/585 (60%), Gaps = 26/585 (4%)

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPF--SSDE 118
           ++  ++   L  + HSCAH+MA+A++ ++P+ +  +GP++ +GFYYD D         ++
Sbjct: 1   MVNFKEDEQLKTLNHSCAHLMAQAIKHLYPQAKFWVGPVVAEGFYYDVDLGDDVIRGEED 60

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           LA IEK+M++I       +++ +S E+A E+F  K + YK++++  +     +T Y QG+
Sbjct: 61  LAAIEKEMKKIAKSGKKIIRKEISKEEALEMF--KDDEYKLDLINGL-EDGTITCYEQGD 117

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + DLCRGPHV +  ++ + FKL++ +GAYW+GDS   +L RIYG  + T++EL ++L  L
Sbjct: 118 FTDLCRGPHVDNV-KLCRNFKLIRHSGAYWKGDSKNKVLQRIYGVCFPTKEELEEHLQLL 176

Query: 239 EESEKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINT 296
           EE+++RDHRK+ ++M LF + +  G G+  +  KG+ ++Q L +Y++RK  K  Y  + T
Sbjct: 177 EEAKERDHRKIGKDMQLFMVDDLVGRGLPMFLPKGYTVWQELENYIKRKERKLGYLHVMT 236

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P V   +L++ SGHWD Y+ NMF     +       +F L+PMNCP H+ ++ + + SY+
Sbjct: 237 PCVGTVNLYKTSGHWDHYKDNMFPAMEMEG-----ESFVLRPMNCPHHMMIYANKMHSYK 291

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +LP+R+AE    +R E SG+L G+ R R F Q+D+H+F T +Q+  E   +  LI   YK
Sbjct: 292 DLPIRIAEIAHDFRFEASGTLKGIERGRHFCQNDSHIFVTPDQIEEEFAGVVKLIFDTYK 351

Query: 417 DFGFEKIMVKLSTR-PEKRV---GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
           DFG       LS R PE +V     D +W+ AEN ++ VLD I     + I      GE 
Sbjct: 352 DFGITDYRCVLSLRDPEDKVKYHDDDEMWNKAENALRRVLDDIGIDYTEEI------GEA 405

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           AFYGPK +  +K A+G ++   T Q+DF LP++F+  Y++   EK  PV++HRA+ GS++
Sbjct: 406 AFYGPKLDVNVKPAVGNEYTLSTCQLDFCLPAKFDLKYIDKDGEKKTPVVLHRAILGSLD 465

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITS---SAVEYAQEIANLLKSHHLSIETDFRNE 589
           RF+  ++E  KGNLP WL+P+Q  V  + +     + YA ++ + L +  + +E D R E
Sbjct: 466 RFMAYILEETKGNLPTWLAPVQVRVMPVKTDNEDLMAYAHKVVDALDAIDVRVELDDRAE 525

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
            + Y++RE  ++K+P +++ G  EA   ++  R  G   T  + L
Sbjct: 526 KLGYRMREGQVQKVPYLLVIGFNEAENGTVSYRLHGEADTTVLPL 570


>gi|121708695|ref|XP_001272218.1| threonyl-tRNA synthetase, putative [Aspergillus clavatus NRRL 1]
 gi|119400366|gb|EAW10792.1| threonyl-tRNA synthetase, putative [Aspergillus clavatus NRRL 1]
          Length = 743

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 220/661 (33%), Positives = 357/661 (54%), Gaps = 45/661 (6%)

Query: 4   DIKLTFPDGSIKNFPVHA---TGSDVAESISRSLAKKAVAVAINGK-VCDLSDPV-REGS 58
           ++ L   +GS    P  A   T       + + ++   V   I+GK + DL+ P+ R+ S
Sbjct: 76  NVTLDLGNGSPSPVPAKAWETTPGSFLRDVPKDISANVVLAKIDGKELWDLNRPLERDCS 135

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF--DKEQPFSS 116
           +  +  +      V  HS AH + EA +  +    ++ GP    GF+YD    + +    
Sbjct: 136 VSFVPFDSLEGREVFWHSSAHCLGEACECEY-GCLLSHGPPTPQGFFYDMAMPENRVVKE 194

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
            +   ++ +   I      F +  ++ E  +++F   K  YK+  ++ +   E  T+YR 
Sbjct: 195 SDWPALDSRASRIFKEKQSFDRLEVTKENLKKMFAYSK--YKLHYIDKLVTGEKSTVYRC 252

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           G   DLCRGPH+++TG++K F K+M+ + AY+ GD +   L RI G A+  +++++++L 
Sbjct: 253 GSLVDLCRGPHIQNTGKIKTF-KIMQNSSAYFLGDQSNDSLQRIRGVAFPDKKQMSEHLK 311

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEIN 295
           FLEE+EKR+H ++ ++ +LF   E   G  F    G KIF  L + +R +  K  Y+E+ 
Sbjct: 312 FLEEAEKRNHLRIGKDQELFFFDEVSPGCPFLLPNGTKIFNALQALLRSEYRKRGYQEVQ 371

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP + D  +W+ SGHW  Y+ +MF +        + R +ALKPMNCPGH  +F H  +SY
Sbjct: 372 TPNMYDVGVWKTSGHWAHYKDDMFKLDV------EKREWALKPMNCPGHFVLFGHRERSY 425

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP+R+A+FG ++RNE SG+L GL RVR F QDD H+FCT++Q+ +E   + + + SIY
Sbjct: 426 RELPLRIADFGVLHRNEASGALSGLTRVRKFQQDDTHIFCTQDQISSEIEGLFDFLQSIY 485

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
             FGF    +KLSTRPEK +G    W+ AE  +K  +   K +     +  +  G+GAFY
Sbjct: 486 GLFGF-TFKLKLSTRPEKYLGDLDTWNYAEEQLKSAMTKFKGA-----DWTIDEGDGAFY 539

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-------------------- 515
           GPK +  + DA+ R++QC TIQ+D+  P  F   Y+ +                      
Sbjct: 540 GPKIDITIADALKREFQCATIQLDYQAPINFKLEYMTNEKGQAVMEESKKEGETKSNEPG 599

Query: 516 -EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANL 574
             +  PV+IHRA+ GS ERF+GI+IE+F G  P W+SP Q ++  +  +  +Y +E+  +
Sbjct: 600 PGRARPVVIHRAIIGSFERFLGILIEHFGGKWPFWISPRQILIVPVMPAVNDYVEELQQI 659

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           L+   L+++ D    T+  KIR   + +   I + G +E   RS+ IR      TQ   +
Sbjct: 660 LRGDKLNVDIDISGNTMQKKIRTGQLAQYNFIFVVGAQEKESRSVNIRNRDDPATQNKGV 719

Query: 635 L 635
           +
Sbjct: 720 M 720


>gi|116492462|ref|YP_804197.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Pediococcus
           pentosaceus ATCC 25745]
 gi|122266074|sp|Q03GB7|SYT_PEDPA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|116102612|gb|ABJ67755.1| Ser-tRNA(Thr) hydrolase [Pediococcus pentosaceus ATCC 25745]
          Length = 648

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 229/651 (35%), Positives = 356/651 (54%), Gaps = 22/651 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           ++I + FPDGS+K F    +  D+A+SIS SLAKKAVA  ING +  L   + E   IEI
Sbjct: 2   TEINIEFPDGSVKPFEQGVSILDIAKSISTSLAKKAVAGKINGALVRLDQAINENVKIEI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELA 120
           +T +      V  +S A ++  A++SI+P V        E GFY D DK +Q  S D+L 
Sbjct: 62  VTKDSEDGNIVNWNSAALVLTSAIESIYPGVHFGEIGNGEHGFYVDTDKVDQQISVDQLP 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IE KM++II          +S E+A  L     + Y+ +I++       V++Y      
Sbjct: 122 AIEDKMKDIIKSKISLKHSEISVEEA--LASVDGDPYQAKIVKRNEKNGKVSVYDVDGKI 179

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
            +     + ST  +K   KL+ VAGAYW G S+ PML RIYGT++  Q++L   L   +E
Sbjct: 180 IVSDNVALLSTSDMKAV-KLLSVAGAYWEGKSSNPMLQRIYGTSFYKQKDLEAELERQKE 238

Query: 241 SEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           + +RDHR +   +DLF +  + G+G+ +W   G  I +++  Y+  +++K  Y+ + TP 
Sbjct: 239 AHERDHRVIGNNLDLFFVDPKVGAGLPYWMPNGATIRRSIERYIIDKEVKHGYQHVYTPV 298

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +++   ++ SGHW  YR +MF        + D     L+PMNCP H+ V+ H ++SYREL
Sbjct: 299 LMNLDAYKTSGHWQHYREDMFPPM----DMGDGEMLELRPMNCPSHIQVYKHHIRSYREL 354

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  T +D H F   +Q+  E  K+  L++ +Y+DF
Sbjct: 355 PIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVAPDQIQAEFKKVLQLMVEVYRDF 414

Query: 419 GFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
                  +LS R     EK    D +W+ +++++K  +D +     D +      GE AF
Sbjct: 415 NITDYTFRLSYRDPANTEKYFDDDEMWNKSQSMLKAAMDDL---GLDYVEAE---GEAAF 468

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +   K A+G +    TIQ+DF LP +F+  YV +  E+  PVMIHR +  ++ERF
Sbjct: 469 YGPKLDVQTKTALGNEETLSTIQLDFMLPKQFDLHYVGADGEEHRPVMIHRGLVSTMERF 528

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINY 593
              +IE +KG  P WL+P Q  +  +       YA ++   +    + +E D RNE + Y
Sbjct: 529 TAYLIEMYKGAFPTWLAPKQVTIIPVKDDLHGAYADKLREEMVDKDIRVEVDHRNEKMGY 588

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIRE   +KIP I++ GD E    S+ +R +G   ++  +  D I  + +E
Sbjct: 589 KIREAQTQKIPYILVVGDNELENNSVSVRHYGEDDSKNEASADFINNIVRE 639


>gi|153812461|ref|ZP_01965129.1| hypothetical protein RUMOBE_02860 [Ruminococcus obeum ATCC 29174]
 gi|149831386|gb|EDM86474.1| hypothetical protein RUMOBE_02860 [Ruminococcus obeum ATCC 29174]
          Length = 657

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 229/627 (36%), Positives = 352/627 (56%), Gaps = 25/627 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T  DGS K +    +  D+A  IS  LA+ A A  +NG+V DL   +  +  + I+T +
Sbjct: 3   ITLKDGSKKEYSEAKSVIDIAYDISEGLARAACAGEVNGEVVDLRTVLDSDCELNILTAK 62

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D + LAV+RH+ +H++A+AVQ+++PE +VAIGP I+ GFYYDF  E PFS ++L +IEK+
Sbjct: 63  DEKGLAVLRHTASHVLAQAVQTLYPEAKVAIGPSIDTGFYYDFAHE-PFSREDLDEIEKE 121

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M++II + +   +   S E A   F+ K E YKVE++E +P  E ++ Y QG+W DLC G
Sbjct: 122 MKKIIKKGAKIERFTKSREDAIAFFKEKNEPYKVELIEDLPEGEEISFYSQGDWTDLCAG 181

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PH+ S   VK F KL+  + AYWRG     ML+RIYGTA+ T+ EL ++L  +EE++KRD
Sbjct: 182 PHLMSVKGVKAF-KLLSSSSAYWRGSEKNAMLTRIYGTAYATKDELKEHLEQMEEAKKRD 240

Query: 246 HRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQH 303
           H KL REM +F   +  G G+      G  + Q L  ++   + K  Y    TP +    
Sbjct: 241 HNKLGREMKIFTTVDVIGQGLPLIMPNGVIMMQELQRWIEDEETKRGYVRTKTPLMAKSD 300

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           L++ SGHWD Y+  MF +    D   D   FAL+PM CP    V+     SYR+LP+R  
Sbjct: 301 LYKISGHWDHYKDGMFVL---GDEETDKEVFALRPMTCPFQYYVYKAEQHSYRDLPLRYG 357

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM---FNECLKIHNLIISIYKDFGF 420
           E  +++RNE SG +HGL RVR FT  + H+    +QM   F +C+ +    + +    G 
Sbjct: 358 ETSTLFRNEDSGEMHGLTRVRQFTISEGHLIVRPDQMVKEFKDCIALAQYCLQV---LGV 414

Query: 421 EK-IMVKLS----TRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           E+ +   LS       EK +G   +W++ E  ++ +L+ +     + +      GE AFY
Sbjct: 415 EEDVTYHLSKWDPNNREKYIGEPEVWNETEEDIRQMLEELNIPFTEDV------GEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +   K+  G++    TIQ D  L  +F+ +Y++ + +K  P +IHR   G  ER +
Sbjct: 469 GPKVDINAKNVYGKEDTMITIQWDALLAEQFDMYYIDENGDKKRPCIIHRTSMGCYERTL 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
             +IE + G  P WL P Q  V  I+     YA ++   +K   +    D R+E + YKI
Sbjct: 529 AWLIEKYAGMFPTWLCPEQVRVIPISEKFNAYADKVEAQMKEAGIRCSVDRRSEKMGYKI 588

Query: 596 REHSIKKIPIIIICGDKEASERSIGIR 622
           RE  ++++P +++ G KE  E  + +R
Sbjct: 589 REARLERVPYMLVVGAKEEEEGKVSVR 615


>gi|261328034|emb|CBH11011.1| threonyl-tRNA synthetase, putative [Trypanosoma brucei gambiense
           DAL972]
          Length = 799

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 242/750 (32%), Positives = 372/750 (49%), Gaps = 138/750 (18%)

Query: 1   MPSDIKLTFPDGSIKNFPVHA---TGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-E 56
           M S I +T  DG  K  P  +   T  D+A+ +S SLA++ VA  +N ++ DL+ P   +
Sbjct: 47  MQSPISITLNDG--KQLPATSWLTTPIDIAKKLSNSLAERVVAARVNEEIWDLTRPFEGD 104

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFS 115
            ++E++  +D  +  V  HS +H++  A++ ++ + ++++GP +E+G F+Y+ +  +P +
Sbjct: 105 ATLELLDWDDADARHVFWHSSSHVLGYALERVF-QTRLSVGPALEEGGFFYEGETNRPVT 163

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES-IPAKENVTLY 174
             +   IE  MQE++    PF +  +  E A  LF+  +  +K +IL S +P     T+Y
Sbjct: 164 EADYTTIETAMQELVKMKVPFQRLTVKKEDALRLFQYTE--FKSKILASKVPENGTCTVY 221

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
           R G   D CRGPH+  TG+VK F  L K + +Y+ G +   +L R+YG ++  Q  LT++
Sbjct: 222 RCGNLIDPCRGPHLPDTGRVKSF-SLTKNSSSYFEGKAENAVLQRVYGISFPKQTMLTEW 280

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEE 293
               EE+ +RDHR + R   LFH  E   G  FW   G +I+ TLI + R++ +   +EE
Sbjct: 281 KKLQEEAARRDHRTIGRHQQLFHFHEASPGNAFWLPHGARIYNTLIEFQRKQYRRRGFEE 340

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           + +P +    LW  SGHWD Y  NMF +    +         +KPMNCPGH  +F     
Sbjct: 341 VVSPNMFSSRLWMVSGHWDKYADNMFLINVEKED------HGMKPMNCPGHCLMFAMQPH 394

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII- 412
           SYRELP+R A+FG ++RNE SG+L GL RVR F QDDAH+FC  +Q+ +E   IH+ +I 
Sbjct: 395 SYRELPIRYADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCRMDQVKDE---IHSALIF 451

Query: 413 --SIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDT---IKNSSQDRINTGV 467
              +Y   GF K  +K STRPE ++GSD +WD+AE+ ++  L++   I +   D  N G 
Sbjct: 452 LKDVYDVLGF-KFFLKHSTRPENKLGSDEMWDEAESYLQAALNSFCGIPDELPDPFNKGS 510

Query: 468 LL-----------------------------------------------GEGAFYGPKFE 480
                                                            G+GAFYGPK +
Sbjct: 511 TFVYDGRKESVKKLRAMLKKRGDKKNDENSPADDVWPGPTHEDAWEENTGDGAFYGPKID 570

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYV-----------NSHSEKCH---------- 519
            +++DA+ R  QC TIQ+DFNLP RF   Y               + +CH          
Sbjct: 571 IVVEDALRRRHQCATIQLDFNLPKRFGLKYTLPSNAAGDDGPAPKATECHKDPNAELKAD 630

Query: 520 ------------------------------------PVMIHRAVFGSIERFIGIMIENFK 543
                                               PVMIHRA+FGS+ER I I+ E++ 
Sbjct: 631 KPEGKVETAAGAPKSSYEKAAHELNIDQRLDANQARPVMIHRAIFGSLERCIAILCEHYG 690

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G+ P WLSP Q IV  ++     YAQ + +   +     + D    T+  KIR   + + 
Sbjct: 691 GDWPFWLSPRQVIVVPVSLENAAYAQTVRDTFFAAGFFADVDNGTATLEKKIRNAELARY 750

Query: 604 PIIIICGDKEASERSIGI-----RRFGSTT 628
             I++ G  E   +S+ +     RR G+ T
Sbjct: 751 NFILVVGQAEQEGQSVNVRTRDNRRHGTKT 780


>gi|72388976|ref|XP_844783.1| threonyl-tRNA synthetase [Trypanosoma brucei TREU927]
 gi|62176044|gb|AAX70165.1| threonyl-tRNA synthetase, putative [Trypanosoma brucei]
 gi|70801317|gb|AAZ11224.1| threonyl-tRNA synthetase, putative [Trypanosoma brucei brucei
           strain 927/4 GUTat10.1]
          Length = 799

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 242/750 (32%), Positives = 372/750 (49%), Gaps = 138/750 (18%)

Query: 1   MPSDIKLTFPDGSIKNFPVHA---TGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-E 56
           M S I +T  DG  K  P  +   T  D+A+ +S SLA++ VA  +N ++ DL+ P   +
Sbjct: 47  MQSPISITLNDG--KQLPATSWLTTPIDIAKKLSNSLAERVVAARVNEEIWDLTRPFEGD 104

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFS 115
            ++E++  +D  +  V  HS +H++  A++ ++ + ++++GP +E+G F+Y+ +  +P +
Sbjct: 105 ATLELLDWDDADARHVFWHSSSHVLGYALERVF-QTRLSVGPALEEGGFFYEGETNRPVT 163

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES-IPAKENVTLY 174
             +   IE  MQE++    PF +  +  E A  LF+  +  +K +IL S +P     T+Y
Sbjct: 164 EADYTTIETAMQELVKMKVPFQRLTVKKEDALRLFQYTE--FKSKILASKVPENGTCTVY 221

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
           R G   D CRGPH+  TG+VK F  L K + +Y+ G +   +L R+YG ++  Q  LT++
Sbjct: 222 RCGNLIDPCRGPHLPDTGRVKSF-SLTKNSSSYFEGKAENAVLQRVYGISFPKQTMLTEW 280

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEE 293
               EE+ +RDHR + R   LFH  E   G  FW   G +I+ TLI + R++ +   +EE
Sbjct: 281 KKLQEEAARRDHRTIGRHQQLFHFHEASPGNAFWLPHGARIYNTLIEFQRKQYRRRGFEE 340

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           + +P +    LW  SGHWD Y  NMF +    +         +KPMNCPGH  +F     
Sbjct: 341 VVSPNMFSSRLWMVSGHWDKYADNMFLINVEKED------HGMKPMNCPGHCLMFAMQPH 394

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII- 412
           SYRELP+R A+FG ++RNE SG+L GL RVR F QDDAH+FC  +Q+ +E   IH+ +I 
Sbjct: 395 SYRELPIRYADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCRMDQVKDE---IHSALIF 451

Query: 413 --SIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDT---IKNSSQDRINTGV 467
              +Y   GF K  +K STRPE ++GSD +WD+AE+ ++  L++   I +   D  N G 
Sbjct: 452 LKDVYDVLGF-KFFLKHSTRPENKLGSDEMWDEAESYLQAALNSFCGIPDELPDPFNKGS 510

Query: 468 LL-----------------------------------------------GEGAFYGPKFE 480
                                                            G+GAFYGPK +
Sbjct: 511 TFVYDGRKESVKKLRAMLKKRGDKKNDENSPADDVWPGPTHEDAWEENTGDGAFYGPKID 570

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYV-----------NSHSEKCH---------- 519
            +++DA+ R  QC TIQ+DFNLP RF   Y               + +CH          
Sbjct: 571 IVVEDALRRRHQCATIQLDFNLPKRFGLKYTLPSNAAGDDGPAPKATECHKDPNAELKAD 630

Query: 520 ------------------------------------PVMIHRAVFGSIERFIGIMIENFK 543
                                               PVMIHRA+FGS+ER I I+ E++ 
Sbjct: 631 KPEGKVEAAAGAPKSSYEKAAHELNIDQRLDANQARPVMIHRAIFGSLERCIAILCEHYG 690

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G+ P WLSP Q IV  ++     YAQ + +   +     + D    T+  KIR   + + 
Sbjct: 691 GDWPFWLSPRQVIVVPVSLENAAYAQTVRDTFFAAGFFADVDNGTATLEKKIRNAELARY 750

Query: 604 PIIIICGDKEASERSIGI-----RRFGSTT 628
             I++ G  E   +S+ +     RR G+ T
Sbjct: 751 NFILVVGQAEQEGQSVNVRTRDNRRHGTKT 780


>gi|260437371|ref|ZP_05791187.1| threonine--tRNA ligase [Butyrivibrio crossotus DSM 2876]
 gi|292810283|gb|EFF69488.1| threonine--tRNA ligase [Butyrivibrio crossotus DSM 2876]
          Length = 651

 Score =  397 bits (1020), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 226/639 (35%), Positives = 347/639 (54%), Gaps = 29/639 (4%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPE 65
           +T  DGS K +    +  D+A+ IS  LA+ A A  I+GKV DL   V E  ++ I+T  
Sbjct: 3   VTLKDGSKKEYSEAMSVIDIAKDISEGLARNACAGEIDGKVVDLRTVVSEDCNLNILTFN 62

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D        H+ +H++AEAV+ ++P+ ++ IGP I++GFYYDFD    F    L  +E +
Sbjct: 63  DEAGKKAYWHTTSHVLAEAVKRLYPDAKLTIGPSIDEGFYYDFDC-PAFDRAALDNLEAE 121

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M++II   +   +  L  E+A +  E + E YKVE++  +P    ++ YRQG++ DLC G
Sbjct: 122 MKKIIKEGASLERFELPREEAIKFMEDRGEPYKVELINDLPEDAVISFYRQGDFVDLCAG 181

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PH+ ST  +K   KL   + AYWRG+SN  +L+RIYG ++    +L  YL  LE+ ++RD
Sbjct: 182 PHLMSTKAIKAV-KLTASSAAYWRGNSNNKVLTRIYGISFTKNDDLKAYLEHLEDIKRRD 240

Query: 246 HRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKDD-----YEEINTPQV 299
           H KL REM+LF   +  G G+     KG +I +TL    +R I+D+     Y    TP +
Sbjct: 241 HNKLGREMELFTTVDVIGQGLPLIMPKGERIIRTL----QRWIEDEEDSRGYVRTKTPLM 296

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHWD Y+  MF +    D  KD   FAL+PM CP    V+    KSYR+LP
Sbjct: 297 AKSDLYKISGHWDHYKDGMFVLG---DEEKDKEVFALRPMTCPFQYYVYKASQKSYRDLP 353

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM---FNECLKIHNL---IIS 413
           +R  E  +++RNE SG +HGL RVR FT  + H+    +QM   F +C+ +       + 
Sbjct: 354 LRYGETSTLFRNEDSGEMHGLTRVRQFTISEGHLIVRPDQMVKEFKDCIALAQYCLRTLG 413

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           + +D  +       +    K +G   +W+D E  ++ VL+ +K    + I      GE A
Sbjct: 414 VEEDVTYHLSRWDPANPGNKYIGKPEVWEDTEQHIRNVLNELKIPFVEDI------GEAA 467

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +   K+  G++    TIQ D  L  +F+ +Y++   +K  P +IHR   G  ER
Sbjct: 468 FYGPKVDINAKNVYGKEDTMITIQWDALLAEQFDMYYIDEKGDKVRPYIIHRTSMGCYER 527

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
            +  +IE + G  P WL P Q  V  I+    +YA  +A  ++ H + +E D R E + Y
Sbjct: 528 TLAWLIEKYAGMFPTWLCPEQVRVLPISDKYADYADSVAAKIREHKIYVEADHRAEKLGY 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIR-RFGSTTTQK 631
           KIR+  + ++P I++ G+KE     + +R RF     QK
Sbjct: 588 KIRDARLARVPYILVVGEKEQETGVVSVRSRFLGDEGQK 626


>gi|148706886|gb|EDL38833.1| threonyl-tRNA synthetase-like 1 [Mus musculus]
          Length = 630

 Score =  397 bits (1020), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 222/612 (36%), Positives = 336/612 (54%), Gaps = 39/612 (6%)

Query: 33  SLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE 91
           +LA  AVA  +NG++ DL  P+  +  +  +T + P   AV  HS AH++  A +     
Sbjct: 2   TLADTAVAAEVNGELYDLDRPLETDCHLRFLTFDSPEGKAVFWHSSAHVLGAAAEQQLGA 61

Query: 92  VQVAIGPIIEDGFYYDF--DKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKAREL 149
           V +  GP  E GFY+DF   KE+   S EL  +E+  QE+IA   PF +   S ++ R+L
Sbjct: 62  V-LCRGPSTESGFYHDFFLGKERTVRSAELPILERICQELIAAAQPFRRLEASRDQLRQL 120

Query: 150 FESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWR 209
           F  K   +K+ ++E        T+Y  G   DLCRGPH+R TGQ+    KL+  + A WR
Sbjct: 121 F--KDNHFKLHLIEEKVTGPTATVYGCGMSVDLCRGPHLRHTGQIGAL-KLLTNSSALWR 177

Query: 210 GDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWH 269
                  L R+ G ++   + L  +    E +E RDHR++ +E +LF   E   G  F+ 
Sbjct: 178 SLGAPETLQRVSGISFPKVELLRNWEARREAAELRDHRRIGKEQELFFFHELSPGSCFFL 237

Query: 270 RKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK------ 322
            +G +++  L++++R +  +  + E+ TP +    LW+QSGHW+ YRA+MF++K      
Sbjct: 238 PRGTRVYNALVAFIRAEYARRGFSEVKTPTLFSTKLWEQSGHWEHYRADMFSLKPPGTDG 297

Query: 323 -----------CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRN 371
                      C  DT+      ALKPMNCP H  +F H  +S+RELPVRLA+FG+++R 
Sbjct: 298 VDNSQSGHPARCPKDTL------ALKPMNCPAHCLMFAHRPRSWRELPVRLADFGALHRA 351

Query: 372 EPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP 431
           E SGSL GL R+  F QDDAH+FC   Q+  E     + +  +Y   GF    + LSTRP
Sbjct: 352 EASGSLGGLTRLWRFQQDDAHIFCAPHQLEAEIQGCLDFLRCVYSVLGF-SFHLALSTRP 410

Query: 432 EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDW 491
              +G   LWD AE +++  L+         +N G    +GAFYGPK +  L DA+GR  
Sbjct: 411 PGFLGEPRLWDQAEQVLQQALEKFGEPWD--LNPG----DGAFYGPKIDVHLHDALGRPH 464

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLS 551
           QCGTIQ+DF LP RF+  Y         PV+IHRAV GS+ER +G++ E+  G  PLWLS
Sbjct: 465 QCGTIQLDFQLPLRFDLQYKGPAGTPECPVLIHRAVLGSVERLLGVLAESCGGKWPLWLS 524

Query: 552 PIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICG 610
           P+Q +V  + +   EYA+++   L++  L  + D  +  T++ ++R   +       + G
Sbjct: 525 PLQVVVIPVRTEQEEYARQVQQCLQAAGLVSDLDADSGLTLSRRVRRAQLAHYNFQFVVG 584

Query: 611 DKEASERSIGIR 622
            +E S+R++ +R
Sbjct: 585 QREQSQRTVNVR 596


>gi|242791014|ref|XP_002481676.1| threonyl-tRNA synthetase, putative [Talaromyces stipitatus ATCC
           10500]
 gi|218718264|gb|EED17684.1| threonyl-tRNA synthetase, putative [Talaromyces stipitatus ATCC
           10500]
          Length = 724

 Score =  397 bits (1020), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 226/624 (36%), Positives = 348/624 (55%), Gaps = 46/624 (7%)

Query: 25  DVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIRHSCAHIMAE 83
           DV + IS ++    +A   + ++ DL+ P+ R+  +  +  + P    V  HS AH + E
Sbjct: 85  DVPKEISANIV---IAKIDDKELWDLNRPLERDCKLSYLPFDHPEGRDVFWHSSAHCLGE 141

Query: 84  AVQSIWPEVQVAIGPIIEDGFYYDF---DKEQPFSSDELAQIEKKMQEIIARDSPFLKQY 140
           A +  +  + ++ GP    GF+YD    +      SD  A ++KK  +I      F +  
Sbjct: 142 ACELEFGCL-LSHGPPTPQGFFYDMAMPNGRAVLPSD-WAPLDKKANQIFKERQSFDRLE 199

Query: 141 LSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKL 200
           +S E  +++F   K  YK+  + ++   E  T+YR G   DLCRGPH+++T ++K F K+
Sbjct: 200 VSKENLKKMFAYSK--YKLHYINNLVEGEKSTVYRCGTLVDLCRGPHIQNTNKIKAF-KI 256

Query: 201 MKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAE 260
           M+ + AY+ GD +   L RI G A+  +  + ++L FLEE+EKR+H+K+ +E +LF   +
Sbjct: 257 MQNSSAYFLGDQSNDSLQRIRGVAFPDKNGMKEHLKFLEEAEKRNHQKIGKEQELFFFDD 316

Query: 261 DGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMF 319
              G  F    G KIF  L   +R +  K  Y+E+ TP + D  +W+ SGHW  Y  +MF
Sbjct: 317 VSPGCPFLLPHGTKIFNALQKLLRAEYRKRGYQEVQTPNMYDVGIWKTSGHWAHYSDDMF 376

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHG 379
            +        + R +ALKPMNCPGH  +F H  +SYRELP+R+A+FG ++RNE SG+LHG
Sbjct: 377 KLDV------EKREWALKPMNCPGHFMLFGHRERSYRELPLRIADFGVLHRNEASGALHG 430

Query: 380 LMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDA 439
           L RVR F QDD+H+FCT EQ+ +E   I + + S+Y  FGF    +KLSTRPEK +G   
Sbjct: 431 LTRVRKFQQDDSHIFCTSEQITSEIEGIFDFLKSVYGLFGF-TFKLKLSTRPEKYMGELE 489

Query: 440 LWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVD 499
            W+ AE  ++  L+  K    + IN     G+GAFYGPK +  + DA+ RD+QC TIQ+D
Sbjct: 490 AWNYAEEQLRQALNNFKGDDWE-INE----GDGAFYGPKIDITISDALKRDFQCATIQLD 544

Query: 500 FNLPSRFNAFYVN---------------------SHSEKCHPVMIHRAVFGSIERFIGIM 538
           +  P  F   Y+                      S++ +  PV+IHRA+ GS ERF+GI+
Sbjct: 545 YQAPINFKLEYITNEKQAGSDAKANKDDTEKAKESNANRARPVVIHRAIIGSFERFLGIL 604

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+F G  P WLSP Q ++  +  +  +YA+E+   L +   +++ D    T+  KIR  
Sbjct: 605 IEHFAGKWPFWLSPRQILIVPVMPALNDYAKELQENLLADKFNVDVDVSGNTLQKKIRTG 664

Query: 599 SIKKIPIIIICGDKEASERSIGIR 622
            + +   I + G +E   RS+ IR
Sbjct: 665 QLAQYNFIFVVGAQEKESRSVNIR 688


>gi|325120065|emb|CBZ55617.1| hypothetical protein NCLIV_060420 [Neospora caninum Liverpool]
          Length = 781

 Score =  397 bits (1019), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 250/724 (34%), Positives = 378/724 (52%), Gaps = 98/724 (13%)

Query: 4   DIKLTFPDGSIKNFPVHATGS-DVAESISRSLAKKAVAV-----------AINGK----- 46
           +I +  PDGS K+   + T   D+A  IS+SLA  ++             AI        
Sbjct: 60  EISIELPDGSKKSGTAYETSPYDIALEISKSLADASLVAKVLYEPGVGTEAITAADDEEE 119

Query: 47  --VC--------------DLSDPVREGS--IEIITPEDPRSLAVIRHSCAHIMAEAVQSI 88
              C              D+  P+ EGS  ++++  +   +  V  HS AHI+ +A+++ 
Sbjct: 120 ECACGEHEESQDDKWILFDMRRPL-EGSCKLQLLKFDSDEAKHVFWHSSAHILGQAIEAT 178

Query: 89  WPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKAR 147
           +   Q+ +GP + +GFYYD +      + +   ++E     +I  D PF +   S  +A 
Sbjct: 179 FG-AQLTVGPALTNGFYYDAYMGNATVTEESYGRLEAAAANVIKADQPFCRLVCSKAEAL 237

Query: 148 ELFESKKEAYKVEILES-IPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGA 206
           ELF      +KV+++ S IP   + T+YR G   DLCRGPHV STG+VK F ++ K +  
Sbjct: 238 ELFADN--PFKVQLISSKIPEGGSTTVYRCGALVDLCRGPHVPSTGKVKAF-QVTKHSAT 294

Query: 207 YWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGS-GV 265
           YW G  N   L R+YG ++  ++ L +YL  +EE++KRDHR L + + LF    + S G 
Sbjct: 295 YWLGRQNLDSLQRVYGVSFPDKKLLKEYLKLVEEAKKRDHRMLGQNLHLFFFDTNVSPGS 354

Query: 266 IFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCA 324
            FW   G K++  L ++MR + +   ++E+ +P +    LW+ SGH+ +Y+ NM+     
Sbjct: 355 CFWLPDGAKVYNKLCAFMREEYRFRGFQEVISPNIFSCDLWKMSGHYQNYKENMYLFDV- 413

Query: 325 DDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVR 384
                + + + LKPMNCPGH  +F H   SYR+LP+RLA+FG ++RNE SGSL GL RVR
Sbjct: 414 -----EGKEWGLKPMNCPGHCIMFKHLAPSYRQLPLRLADFGVLHRNELSGSLTGLTRVR 468

Query: 385 GFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
            F QDDAH+FC  +Q+  E     N +  +Y  FGF    + LSTRP+K +G  +LWD A
Sbjct: 469 RFQQDDAHIFCRMDQVKQEVADALNFLFFVYDQFGF-SFELFLSTRPKKALGDRSLWDAA 527

Query: 445 ENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPS 504
           E  +K  L+      Q  +N     G+GAFYGPK +  L DA+ R  QCGTIQ+DF LP 
Sbjct: 528 EGALKEALEETGRPWQ--LNP----GDGAFYGPKIDIRLWDALKRPHQCGTIQLDFQLPI 581

Query: 505 RFNAFY------VNSHSEK----------------------------------CHPVMIH 524
           RFN  Y      V +  EK                                    PV+IH
Sbjct: 582 RFNLQYRTQDEAVAASREKAKDEKSEKRTENGDEPEATKEEEFGVEQPLRPGMARPVIIH 641

Query: 525 RAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIET 584
           RA+ GSIER   ++IE+  G LP WLSP Q IV  I+    +YA  + ++L S    +  
Sbjct: 642 RAILGSIERMCAVVIEHTGGKLPFWLSPRQCIVLPISDKVNDYATSVRDVLHSCGYEVGL 701

Query: 585 DFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV-SLLDAIPILTK 643
           D  N T+N KIRE  +++   +++ G+KE +++++ +R       Q V S+ D + +  K
Sbjct: 702 DVSNNTVNKKIREAQLQQWNYLLVVGEKERADKTVTVRDRADPEHQHVLSMEDLLQLFEK 761

Query: 644 ESLP 647
           + +P
Sbjct: 762 QGMP 765


>gi|291542490|emb|CBL15600.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Ruminococcus
           bromii L2-63]
          Length = 648

 Score =  397 bits (1019), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 216/633 (34%), Positives = 352/633 (55%), Gaps = 29/633 (4%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I +    G++K F    T +++A+SI   L K      ++G +CDL  P+ ++  +E++T
Sbjct: 2   INVELKGGAVKEFENGTTPAEIAKSIGAGLYKSVCCAKVDGDLCDLRTPLGKDCKVELLT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            ++        H+ +H++A+AV+ ++P  + AIGP +++GFYYDFD E+PFS ++L +I+
Sbjct: 62  FDNVDGQKTFWHTASHVLAQAVKRLYPNAKCAIGPAVDNGFYYDFDVEKPFSPEDLEKIK 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-ENVTLYRQGEWFDL 182
            +M++I+       +  LS E+A +  E   E YKVE+++    K E++T Y+QGE+ DL
Sbjct: 122 AEMKKIVKSGLELERVELSPEEAEKKLEEMNEPYKVELVKEHSDKGEHITFYKQGEFIDL 181

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPH+ S   +K   +L    GAYWRGD+N   L R+YG A+     L ++L  LEE++
Sbjct: 182 CAGPHLMSVAPIKAI-ELTACTGAYWRGDANNAQLCRVYGVAFPKASMLEEHLKKLEEAK 240

Query: 243 KRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEE------IN 295
            RDH KL RE++ F   +  G G+     KG ++ Q L  ++     +D E+        
Sbjct: 241 LRDHNKLGRELEYFTTVDYVGQGLPILLPKGARVVQLLQRWV-----EDVEQSKGCLLTK 295

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP +  + L++ SGHWD Y   MF +    D  K+   FAL+PM CP    V+ +  +SY
Sbjct: 296 TPLLAKRDLYKISGHWDHYLDGMFVLGDPHDEEKE--CFALRPMTCPFQYQVYLNKQRSY 353

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM---FNECLKIHNLI- 411
           R+LP+RL E  +++RNE SG +HGL+RVR FT  + H     +Q+   F  CL++     
Sbjct: 354 RDLPMRLTETSTLFRNEASGEMHGLIRVRQFTISEGHYILRPDQLEQEFKGCLELAKYFL 413

Query: 412 --ISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL 469
             + + ++  F         +  K  G+   W++++ +MK +LD +       ++  + +
Sbjct: 414 DTVGLLENCTFRFSQWDPENKNNKYEGTKEQWEESQAVMKTILDDLD------VDYEIGI 467

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG 529
            E AFYGPK +   K+  G++    TIQ+D  L  RF  +Y++   +K  P +IHR   G
Sbjct: 468 DEAAFYGPKLDIQYKNVFGKEDTIVTIQIDMLLAERFGMYYIDKDGQKKLPYIIHRTSLG 527

Query: 530 SIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE 589
             ER +  MIE F G +PLWL+P Q  +  I    VEYAQ IA+ L S  + +  D R+E
Sbjct: 528 CFERTLAYMIERFAGVMPLWLAPEQIRLLPIKEGNVEYAQGIADRLTSLGMRVTVDSRDE 587

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
            I  KI+   +++IP I++ GD E +  ++ +R
Sbjct: 588 NIGPKIKAARLERIPYILVIGDNEMNSSTVTVR 620


>gi|269860011|ref|XP_002649729.1| threonyl-tRNA synthetase [Enterocytozoon bieneusi H348]
 gi|263511674|sp|B7XIA1|SYTC_ENTBH RecName: Full=Probable threonyl-tRNA synthetase, cytoplasmic;
           AltName: Full=Threonine--tRNA ligase; Short=ThrRS
 gi|220066924|gb|EED44394.1| threonyl-tRNA synthetase [Enterocytozoon bieneusi H348]
          Length = 634

 Score =  396 bits (1017), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 226/628 (35%), Positives = 362/628 (57%), Gaps = 29/628 (4%)

Query: 21  ATGSDVAESISRSLAKK-AVAVAINGKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSCA 78
           ++G+ + E IS     K  +A AI+G + D++  + E   IE+   +      V  HS A
Sbjct: 17  SSGTILQELISTHYPNKNIIACAIDGIMADINTEINENQKIELYDFDSKEGQHVYWHSSA 76

Query: 79  HIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLK 138
           HI+  A+ +++ + ++  GP +++GFYYD D E+P   ++ A IEK+MQ II ++  F K
Sbjct: 77  HILGNALVNLY-QCKLVNGPALDEGFYYDIDIERPIREEDFADIEKEMQRIINKNIDFRK 135

Query: 139 QYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFF 198
           + +  +   +++  K   YKV  + +IP    +++Y   E++D+C+GPH++STG VK F 
Sbjct: 136 KMIKKDDLLKMY--KDNDYKVHFINNIPDNL-ISVYYNDEFYDMCQGPHIQSTGLVKAF- 191

Query: 199 KLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI 258
           K++K +  Y+   ++  +L RIYG ++  +  L +Y   ++++++ DHRK+ +E++L+  
Sbjct: 192 KILKSSSCYFLNSADNQILQRIYGISFPNKTLLKEYEEKVQKAKEMDHRKIGKELNLYFF 251

Query: 259 AEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRAN 317
            E   G  FW   G  I+  L+ ++R++ IK  ++E+ TP +    LW++SGH+ +Y+ N
Sbjct: 252 HEYSPGSCFWLPDGVVIYNRLMEFLRKEYIKRGFKEVITPNIFHIDLWKESGHYQNYKEN 311

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           ++ +   D        FALKPMNCPGH  +F    +SY+ELP+R A+FG ++RNE SGSL
Sbjct: 312 IYGISGED--------FALKPMNCPGHCIIFKSVERSYKELPLRYADFGVLHRNECSGSL 363

Query: 378 HGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGS 437
            GL RVR F QDDAH+F +K  +  E       + ++Y  F F K  + LSTRP K +G+
Sbjct: 364 TGLTRVRRFQQDDAHIFTSKSSIKEEIENAIGFLKTVYSIFNF-KYELFLSTRPTKFLGT 422

Query: 438 DALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ 497
              WD AE  +K  +  I +     +N G    +GAFYGPK + IL D + R  QC TIQ
Sbjct: 423 IEEWDVAEKSLKDAI--IDSGHTYTLNEG----DGAFYGPKIDIILHDILNRKIQCATIQ 476

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIV 557
           +DF LP RF+  + N       PV+IHRA+ GS ERFI I+IE++  +LP WL P Q  +
Sbjct: 477 LDFQLPQRFDLKFKNELGMYETPVIIHRAILGSFERFIAILIESYGKHLPFWLHPRQVGL 536

Query: 558 TTITSSAVEYA----QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
            TI      Y     + + N++    +   TD + +T+N KIR+ ++    II I GDKE
Sbjct: 537 VTIDCKHENYMYTVEKSMLNVVLDLGIRKYTDPK-DTLNKKIRKATLDGCKIICILGDKE 595

Query: 614 ASERSIGIRRFGSTTTQKV-SLLDAIPI 640
             +  + +R    T T K+  LL+ I +
Sbjct: 596 MEKNEVNVRIGNKTRTYKIEELLEKIKV 623


>gi|296814972|ref|XP_002847823.1| threonyl-tRNA synthetase [Arthroderma otae CBS 113480]
 gi|238840848|gb|EEQ30510.1| threonyl-tRNA synthetase [Arthroderma otae CBS 113480]
          Length = 739

 Score =  396 bits (1017), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 223/651 (34%), Positives = 345/651 (52%), Gaps = 56/651 (8%)

Query: 20  HATGSDVAESISRSLAKKAVAVAINGK-VCDLSDPV-REGSIEIITPEDPRSLAVIRHSC 77
            +T     + I + ++   V   ++GK + DL  P+ R+  I  +  +      V  HS 
Sbjct: 77  QSTPGSFLKDIPKEISSSVVIAKLDGKELWDLDRPLERDCRIRFLPFDSAEGREVFWHSS 136

Query: 78  AHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF--DKEQPFSSDELAQIEKKMQEIIARDSP 135
           AH + EA +  +    ++ GP    GF+YD         +  +   ++ K   I      
Sbjct: 137 AHALGEACECQY-GCLLSHGPPTAHGFFYDMAIPNGGVVTQGDWPSLDSKTTRIFKEKQS 195

Query: 136 FLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVK 195
           F +  +S E  +++F   K  YK+  ++++   E+ T+YR G   DLCRGPH+++TG++K
Sbjct: 196 FDRLEVSKENLKKMFGYSK--YKLHYIDNLIEGESSTVYRCGTLVDLCRGPHIQNTGKIK 253

Query: 196 KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDL 255
              K+M+ + AY+ GD     L RI G A+  ++ L ++L F+EE+EKR+H+K+ +E +L
Sbjct: 254 AM-KIMQNSSAYFLGDQTNDALQRIRGVAFPDKKLLQEHLKFMEEAEKRNHQKIGKEQEL 312

Query: 256 FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSY 314
           F   E   G  F    G KIF  L   +R +  K  Y+E+ +P + D  +W+QSGHW  Y
Sbjct: 313 FFFDEVSPGCPFLLPNGTKIFNALQKLLRTEYRKRGYQEVQSPNMYDVGIWRQSGHWAHY 372

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
           + +MF +        + R +ALKPMNCPGH  +F H  +SYRELP+R+A+FG ++RNE S
Sbjct: 373 KDDMFKLDV------EKRDWALKPMNCPGHCIMFGHRERSYRELPLRMADFGVLHRNEAS 426

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
           G+LHGL RVR F QDD H+FCT  Q+  E   + + + +IY  FGF    +KLSTRPEK 
Sbjct: 427 GALHGLTRVRKFQQDDTHIFCTDNQIMEEIEGLFDFLRAIYGLFGFS-FKLKLSTRPEKY 485

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           +G    WD AE  ++  L   K +  D     +  G+GAFYGPK +  + DA+ R+ QC 
Sbjct: 486 LGKLETWDYAEAQLREALTKFKGADWD-----IDEGDGAFYGPKIDITISDALKREHQCA 540

Query: 495 TIQVDFNLPSRFNAFYVNSHS-----------------------------------EKCH 519
           TIQ+D+ LP  F   Y+   +                                    +  
Sbjct: 541 TIQLDYQLPLNFKLEYMTGETVPKSAAPADPQAEAKPEDDSKRAQAPTADPAAPGPGRAR 600

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH 579
           PV+IHRA+ GS ERF GI+IE+F G  P WLSP Q ++  + +SA +Y +E+  +L+   
Sbjct: 601 PVVIHRAIIGSFERFFGILIEHFGGKWPFWLSPRQILIVPVMASANDYVEELQEILRGDK 660

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
           L+++ D    T+  KIR   + +   I + G +E   RS+ IR     ++Q
Sbjct: 661 LNVDIDLSGHTMQKKIRNGQLAQYNFIFVVGAQEKESRSVNIRNRDDPSSQ 711


>gi|73951035|ref|XP_857273.1| PREDICTED: similar to threonyl-tRNA synthetase-like 2 isoform 5
           [Canis familiaris]
          Length = 687

 Score =  396 bits (1017), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 216/527 (40%), Positives = 313/527 (59%), Gaps = 20/527 (3%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAH 79
            T   VA  IS  LA+  V   +NG++ DL  P+  + ++E++T ++  + AV  HS AH
Sbjct: 176 TTPYQVAAEISPELAESTVVAKVNGELWDLDRPLEGDSTLELLTFDNEEAQAVYWHSSAH 235

Query: 80  IMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQIEKKMQEIIARDSPFLK 138
           I+ EA++ ++    +  GP IE+GFYYD F +++  SS EL+ +E   + II    PF +
Sbjct: 236 ILGEAME-LYYGGHLCYGPPIENGFYYDMFIEDRAVSSTELSALENICKTIIKEKQPFER 294

Query: 139 QYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFF 198
             +S E   E+F+  K  +K  IL         T+YR G   DLC+GPHVR TG++K   
Sbjct: 295 LEISKEVLLEMFKYNK--FKCRILNEKVHTSTTTVYRCGPLIDLCKGPHVRHTGKIKAI- 351

Query: 199 KLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI 258
           K+ K +  YW G+     L RIYG ++   + +  +  F EE++ RDHRK+ +E +LF  
Sbjct: 352 KIFKNSSTYWEGNPEMETLQRIYGISFPDNKMMKTWEKFQEEAKNRDHRKVGKEQELFFF 411

Query: 259 AEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRAN 317
            +   G  F+  +G  I+ TL+ ++R +  + ++ E+ +P + +  LW+ SGHW  Y  N
Sbjct: 412 HDLSPGSCFFLPRGAFIYNTLMDFIREEYHRRNFTEVLSPNMFNSKLWETSGHWQHYSEN 471

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           MF      DT      FALKPMNCPGH  +F H  +S+RE+PVRLA+FG ++RNE SG+L
Sbjct: 472 MFTFDIEKDT------FALKPMNCPGHCLMFAHRPRSWREMPVRLADFGVLHRNELSGTL 525

Query: 378 HGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGS 437
            GL RVR F QDDAH+FCT EQ+  E       + S+Y  FGF    + LSTRPE  +G 
Sbjct: 526 SGLTRVRRFQQDDAHIFCTVEQIEEEIKGCLQFLQSVYSTFGF-SFQLNLSTRPENFLGE 584

Query: 438 DALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ 497
             LWD+AE  ++  L  ++     ++N     G+GAFYGPK +  +KDAIGR  QC TIQ
Sbjct: 585 VELWDEAEKQLQNSL--VEFGKPWKMNP----GDGAFYGPKIDIKIKDAIGRYHQCATIQ 638

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           +DF LP RFN  Y +   +K +PV+IHRA+ GS+ER I I+ EN+ G
Sbjct: 639 LDFQLPIRFNLTYFDDGDDKRNPVIIHRAILGSVERMIAILSENYGG 685


>gi|313637683|gb|EFS03062.1| threonyl-tRNA synthetase [Listeria seeligeri FSL S4-171]
          Length = 483

 Score =  395 bits (1016), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 201/491 (40%), Positives = 303/491 (61%), Gaps = 19/491 (3%)

Query: 161 ILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRI 220
           ++E+IPA E VT+Y QGE+FDLCRG HV STG+++  FKL+ VAGAYWRGDSN  ML RI
Sbjct: 1   LIEAIPADETVTIYTQGEFFDLCRGVHVPSTGKIQ-VFKLLSVAGAYWRGDSNNKMLQRI 59

Query: 221 YGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTL 279
           YGTA+  +  L +++   +E+++RDHRKL +E++LF +  E G G+  W  KG  I + +
Sbjct: 60  YGTAFFDKNGLKEFIQMQKEAKERDHRKLGKELELFTNSIEVGQGLPLWLPKGATIRRVI 119

Query: 280 ISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKP 338
             Y+  ++ +  Y  + TP + +  L++ SGHWD Y  +MF     D+         L+P
Sbjct: 120 ERYIVDKEERLGYNHVYTPIMANVELYKTSGHWDHYHEDMFPTMKMDN-----EELVLRP 174

Query: 339 MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE 398
           MNCP H+ ++ + + SYRELP+R+AE G ++R E SG+L GL RVRG T +DAHVF   +
Sbjct: 175 MNCPHHMMIYKNDIHSYRELPIRIAELGMMHRYEMSGALSGLQRVRGMTLNDAHVFVRPD 234

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDT 454
           Q+ +E  ++  LI+ +YKDF  +    +LS R     EK    DA+WD A+ ++K  +D 
Sbjct: 235 QIKDEFKRVVELILEVYKDFDIKDYSFRLSYRDPKNTEKYFDDDAMWDKAQAMLKSAMDE 294

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH 514
           +     D        GE AFYGPK +  +K AIG++    T+Q+DF LP RF+  Y+   
Sbjct: 295 M---GMDYFEAD---GEAAFYGPKLDVQVKTAIGKEETLSTVQLDFLLPERFDLTYIGED 348

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIAN 573
            EK  PV+IHR V  ++ERF+  +IE +KG  P WL+P+Q  +  + + A ++YA+ + +
Sbjct: 349 GEKHRPVVIHRGVVSTMERFVAYLIEEYKGAFPTWLAPVQMELIPVNADAHLDYAKGVQD 408

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            L+   L +E D RNE + YKIRE   KKIP  ++ GD+E    ++ +RR+GS  ++ + 
Sbjct: 409 KLQRAGLRVEVDDRNEKLGYKIREAQTKKIPYALVLGDQEMESGTVNVRRYGSKDSETME 468

Query: 634 LLDAIPILTKE 644
           L   I  + +E
Sbjct: 469 LDTFISQVVQE 479


>gi|326477787|gb|EGE01797.1| threonyl-tRNA synthetase [Trichophyton equinum CBS 127.97]
          Length = 763

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 229/661 (34%), Positives = 352/661 (53%), Gaps = 58/661 (8%)

Query: 20  HATGSDVAESISRSLAKKAVAVAINGK-VCDLSDPV-REGSIEIITPEDPRSLAVIRHSC 77
           H+T     + I + L+   V   ++GK + DL  P+ R+  I  +  +      V  HS 
Sbjct: 101 HSTPGSFLKDIPKELSSSVVIAKLDGKELWDLDRPLERDCRIRYLPFDSVEGREVFWHSS 160

Query: 78  AHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQP--FSSDELAQIEKKMQEIIARDSP 135
           AH + EA +  +    ++ GP    GF+YD    +    +  +   ++ K  +I      
Sbjct: 161 AHALGEACECQY-GCLLSHGPPTAQGFFYDMAIPEGGVVTQADYPLLDAKTAKIFKEKQS 219

Query: 136 FLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVK 195
           F +  +S E  +++F   K  YK+  ++++   E+ T+YR G   DLCRGPH+++TG++K
Sbjct: 220 FDRLEVSKENLKKMFGYSK--YKLHYIDNLVEGESSTVYRCGTLVDLCRGPHIQNTGKIK 277

Query: 196 KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDL 255
              K+ + + AY+ GD     L RI G A+  ++ L ++L FLEE+EKR+H K+ +E +L
Sbjct: 278 AM-KITQNSSAYFLGDQTNDALQRIRGVAFPDKKLLQEHLKFLEEAEKRNHLKIGKEQEL 336

Query: 256 FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSY 314
           F   E   G  F    G KIF  L   +R +  K  Y+E+ +P + D  +W+QSGHW  Y
Sbjct: 337 FFFDEVSPGCPFLLPNGTKIFNALQKLLRTEYRKRGYQEVQSPNMYDVGIWRQSGHWAHY 396

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
           + +MF +        + R +ALKPMNCPGH  +F H  +SYRELP+R+A+FG ++RNE S
Sbjct: 397 KDDMFKLDV------EKRDWALKPMNCPGHCIMFGHRERSYRELPLRMADFGVLHRNEAS 450

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
           G+LHGL RVR F QDD H+FCT  Q+  E   + + + +IY  FGF    +KLSTRPEK 
Sbjct: 451 GALHGLTRVRKFQQDDTHIFCTDNQIMEEIEGLFDFLRAIYGLFGF-SFKLKLSTRPEKY 509

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           +G    WD AE  ++  L   K +  +     +  G+GAFYGPK +  + DA+ R+ QC 
Sbjct: 510 LGKLETWDFAEAQLREALTKFKGADWE-----IDEGDGAFYGPKIDITISDALKREHQCA 564

Query: 495 TIQVDFNLPSRFNAFYV------------NSHSE-----------------------KCH 519
           TIQ+D+ LP  F   Y+            N  +E                       +  
Sbjct: 565 TIQLDYQLPLNFKLEYMTGETIPKSAAPANPKAEAKPEGDSNPTQAQPSDSSTPGPGRAR 624

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH 579
           PV+IHRA+ GS ERF GI+IE+F G  P WLSP Q ++  + +SA +Y +E+  +L+   
Sbjct: 625 PVVIHRAIIGSFERFFGILIEHFGGKWPFWLSPRQILIVPVMASANDYVEELQEILRGDK 684

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
           L+++ D    T+  KIR   + +   I + G +E   RS+ IR     ++Q    L  IP
Sbjct: 685 LNVDIDLSGHTMQKKIRNGQLAQYNFIFVVGAQEKESRSVNIRNRDDPSSQTKGSL--IP 742

Query: 640 I 640
           +
Sbjct: 743 L 743


>gi|302656156|ref|XP_003019834.1| hypothetical protein TRV_06122 [Trichophyton verrucosum HKI 0517]
 gi|291183606|gb|EFE39210.1| hypothetical protein TRV_06122 [Trichophyton verrucosum HKI 0517]
          Length = 764

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 224/652 (34%), Positives = 346/652 (53%), Gaps = 57/652 (8%)

Query: 20  HATGSDVAESISRSLAKKAVAVAINGK-VCDLSDPV-REGSIEIITPEDPRSLAVIRHSC 77
           H+T     + I + L+   V   ++GK + DL  P+ R+  I  +  +      V  HS 
Sbjct: 101 HSTPGSFLKDIPKELSSSVVIAKLDGKELWDLDRPLERDCRIRYLPFDSVEGREVFWHSS 160

Query: 78  AHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQP--FSSDELAQIEKKMQEIIARDSP 135
           AH + EA +  +    ++ GP    GF+YD    +    +  +   ++ K  +I      
Sbjct: 161 AHALGEACECQY-GCLLSHGPPTAQGFFYDMAIPEGGVVTQADYPSLDAKTAKIFKEKQS 219

Query: 136 FLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVK 195
           F +  +S E  +++F   K  YK+  ++++   E+ T+YR G   DLCRGPH+++TG++K
Sbjct: 220 FDRLEVSKENLKKMFGYSK--YKLHYIDNLIEGESSTVYRCGTLVDLCRGPHIQNTGKIK 277

Query: 196 KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDL 255
              K+ + + AY+ GD     L RI G A+  ++ L ++L FLEE+EKR+H K+ +E +L
Sbjct: 278 AM-KITQNSSAYFLGDQTNDALQRIRGVAFPDKKLLQEHLKFLEEAEKRNHLKIGKEQEL 336

Query: 256 FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSY 314
           F   E   G  F    G KIF  L   +R +  K  Y+E+ +P + D  +W+QSGHW  Y
Sbjct: 337 FFFDEVSPGCPFLLPNGTKIFNALQKLLRTEYRKRGYQEVQSPNMYDVGIWRQSGHWAHY 396

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
           + +MF +        + R +ALKPMNCPGH  +F H  +SYRELP+R+A+FG ++RNE S
Sbjct: 397 KDDMFKLDV------EKRDWALKPMNCPGHCIMFGHRERSYRELPLRMADFGVLHRNEAS 450

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
           G+LHGL RVR F QDD H+FCT  Q+  E   + + + +IY  FGF    +KLSTRPEK 
Sbjct: 451 GALHGLTRVRKFQQDDTHIFCTDNQIMEEIEGLFDFLRAIYGLFGF-SFKLKLSTRPEKY 509

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           +G    WD AE  ++  L   K +  +     +  G+GAFYGPK +  + DA+ R+ QC 
Sbjct: 510 LGKLETWDFAEAQLREALTKFKGADWE-----IDEGDGAFYGPKIDITISDALKREHQCA 564

Query: 495 TIQVDFNLPSRFNAFYVNSHS------------------------------------EKC 518
           TIQ+D+ LP  F   Y+   +                                     + 
Sbjct: 565 TIQLDYQLPLNFKLEYMTGETVPKSAAPATSKAEAKPAEGDSNPAQAQPSDSSTPGPGRA 624

Query: 519 HPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSH 578
            PV+IHRA+ GS ERF GI+IE+F G  P WLSP Q ++  + +SA +Y +E+  +L+  
Sbjct: 625 RPVVIHRAIIGSFERFFGILIEHFGGKWPFWLSPRQILIVPVMASANDYVEELQEILRGD 684

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
            L+++ D    T+  KIR   + +   I + G +E   RS+ IR     ++Q
Sbjct: 685 KLNVDIDLSGHTMQKKIRNGQLAQYNFIFVVGAQEKESRSVNIRNRDDPSSQ 736


>gi|302497531|ref|XP_003010766.1| hypothetical protein ARB_03468 [Arthroderma benhamiae CBS 112371]
 gi|291174309|gb|EFE30126.1| hypothetical protein ARB_03468 [Arthroderma benhamiae CBS 112371]
          Length = 764

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 224/652 (34%), Positives = 346/652 (53%), Gaps = 57/652 (8%)

Query: 20  HATGSDVAESISRSLAKKAVAVAINGK-VCDLSDPV-REGSIEIITPEDPRSLAVIRHSC 77
           H+T     + I + L+   V   ++GK + DL  P+ R+  I  +  +      V  HS 
Sbjct: 101 HSTPGSFLKDIPKELSSSVVIAKLDGKELWDLDRPLERDCRIRYLPFDSVEGREVFWHSS 160

Query: 78  AHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQP--FSSDELAQIEKKMQEIIARDSP 135
           AH + EA +  +    ++ GP    GF+YD    +    +  +   ++ K  +I      
Sbjct: 161 AHALGEACECQY-GCLLSHGPPTAQGFFYDMAIPEGGVVTQADYPSLDAKTAKIFKEKQS 219

Query: 136 FLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVK 195
           F +  +S E  +++F   K  YK+  ++++   E+ T+YR G   DLCRGPH+++TG++K
Sbjct: 220 FDRLEVSKENLKKMFGYSK--YKLHYIDNLIEGESSTVYRCGTLVDLCRGPHIQNTGKIK 277

Query: 196 KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDL 255
              K+ + + AY+ GD     L RI G A+  ++ L ++L FLEE+EKR+H K+ +E +L
Sbjct: 278 AM-KITQNSSAYFLGDQTNDALQRIRGVAFPDKKLLQEHLKFLEEAEKRNHLKIGKEQEL 336

Query: 256 FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSY 314
           F   E   G  F    G KIF  L   +R +  K  Y+E+ +P + D  +W+QSGHW  Y
Sbjct: 337 FFFDEVSPGCPFLLPNGTKIFNALQKLLRTEYRKRGYQEVQSPNMYDVGIWRQSGHWAHY 396

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
           + +MF +        + R +ALKPMNCPGH  +F H  +SYRELP+R+A+FG ++RNE S
Sbjct: 397 KDDMFKLDV------EKRDWALKPMNCPGHCIMFGHRERSYRELPLRMADFGVLHRNEAS 450

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
           G+LHGL RVR F QDD H+FCT  Q+  E   + + + +IY  FGF    +KLSTRPEK 
Sbjct: 451 GALHGLTRVRKFQQDDTHIFCTDNQIMEEIEGLFDFLRAIYGLFGF-SFKLKLSTRPEKY 509

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           +G    WD AE  ++  L   K +  +     +  G+GAFYGPK +  + DA+ R+ QC 
Sbjct: 510 LGKLETWDFAEAQLREALTKFKGADWE-----IDEGDGAFYGPKIDITISDALKREHQCA 564

Query: 495 TIQVDFNLPSRFNAFYVNSHS------------------------------------EKC 518
           TIQ+D+ LP  F   Y+   +                                     + 
Sbjct: 565 TIQLDYQLPLNFKLEYMTGEAVPKSAAPATSKAEAKPAEGDSNPAQAQPSDSSTPGPGRA 624

Query: 519 HPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSH 578
            PV+IHRA+ GS ERF GI+IE+F G  P WLSP Q ++  + +SA +Y +E+  +L+  
Sbjct: 625 RPVVIHRAIIGSFERFFGILIEHFGGKWPFWLSPRQILIVPVMASANDYVEELQEILRGD 684

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
            L+++ D    T+  KIR   + +   I + G +E   RS+ IR     ++Q
Sbjct: 685 KLNVDIDLSGHTMQKKIRNGQLAQYNFIFVVGAQEKESRSVNIRNRDDPSSQ 736


>gi|253580110|ref|ZP_04857377.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251848629|gb|EES76592.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 653

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 230/627 (36%), Positives = 349/627 (55%), Gaps = 25/627 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T  DGS K +    +  D+A  IS  LA+ A A  +NG+V DL   +  +  + I+T +
Sbjct: 3   VTLKDGSKKEYAEAKSVIDIAYDISEGLARAACAGEVNGEVVDLRTVIDSDCELNILTAK 62

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D + LAV+RH+ +H++A+AVQ+++P+ +VAIGP I+ GFYYDFD   PFS D+L  IEK+
Sbjct: 63  DEKGLAVLRHTASHVLAQAVQTLFPDAKVAIGPSIDTGFYYDFDC-PPFSRDDLDAIEKE 121

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M++II + +   +   S E A   F+ K E YKVE++E +P    ++ Y QG+W DLC G
Sbjct: 122 MKKIIKKGAKIERFTKSREDAIAYFQEKNEPYKVELIEDLPEGSEISFYSQGDWTDLCAG 181

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PH+ S   VK F KL+  + AYWRG     ML+RIYGTA+ ++ EL ++L  +EE++KRD
Sbjct: 182 PHLMSVKGVKAF-KLLSSSSAYWRGSEKNAMLTRIYGTAYASKDELKEHLEQMEEAKKRD 240

Query: 246 HRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQH 303
           H KL REM +F   +  G G+      G  + Q L  ++   + K  Y    TP +    
Sbjct: 241 HNKLGREMKIFTTVDVIGQGLPLIMPNGVIMMQELQRWIEDEETKRGYIRTKTPLMAKSD 300

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           L++ SGHWD Y+  MF +    D   D   FAL+PM CP    V+     SYR+LP+R  
Sbjct: 301 LYKISGHWDHYKEGMFVL---GDEETDKEVFALRPMTCPFQYYVYKAEQHSYRDLPLRYG 357

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM---FNECLKIHNLIISIYKDFGF 420
           E  +++RNE SG +HGL RVR FT  + H+    +QM   F +C+ +    + +    G 
Sbjct: 358 ETSTLFRNEDSGEMHGLTRVRQFTISEGHLIVRPDQMVKEFKDCIALAQYCLQV---LGV 414

Query: 421 EK-IMVKLS----TRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           E+ +   LS       EK +G   +W+  E  ++ +L+ +     + +      GE AFY
Sbjct: 415 EEDVTYHLSKWDPNNREKYIGDAEVWNQTEAHIRQMLEELNIPFTEDV------GEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +   K+  G++    TIQ D  L  +F+ +Y++ + EK  P +IHR   G  ER +
Sbjct: 469 GPKVDINAKNVYGKEDTMITIQWDALLAEQFDMYYIDENGEKQRPYIIHRTSMGCYERTL 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
             +IE + G  P WL P Q  V  I+     YA ++   LK + +    D R+E + YKI
Sbjct: 529 AWLIEKYAGMFPTWLCPEQVRVIPISEKFHNYAAKVEAQLKENGIRCSVDQRSEKMGYKI 588

Query: 596 REHSIKKIPIIIICGDKEASERSIGIR 622
           RE  + ++P ++I G KE  E  + +R
Sbjct: 589 REARLARVPYMLIVGAKEEEEGKVSVR 615


>gi|48477666|ref|YP_023372.1| threonyl-tRNA synthetase [Picrophilus torridus DSM 9790]
 gi|48430314|gb|AAT43179.1| threonyl-tRNA synthetase [Picrophilus torridus DSM 9790]
          Length = 710

 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 228/649 (35%), Positives = 359/649 (55%), Gaps = 59/649 (9%)

Query: 23  GSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPEDPRSLAVIRHSCAHIM 81
           G   ++ +   L ++ VA  +N ++ DLSD V E G  E+I       L ++RHS AH++
Sbjct: 57  GQKFSDLVPEKLNQRIVAARMNKRLFDLSDSVPEDGDAELIDVYSDDGLIILRHSAAHVL 116

Query: 82  AEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYL 141
           A AV  ++  +        ++GFYYDFD  QP S+D+  +IE KM++II ++    K  +
Sbjct: 117 ANAVVELYNALPNTSNEN-QEGFYYDFDM-QPISTDDFPKIEDKMKDIIDKNIKIEKYTM 174

Query: 142 SHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLM 201
             +    LF  K   YK++ +    A ++ T+YR+G++++ CRGPHV STG +K F KL+
Sbjct: 175 KKDDILNLF--KNNPYKIDKINK-NADDDATVYREGDYYEFCRGPHVPSTGFIKAF-KLL 230

Query: 202 KVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI-AE 260
            +A   + G+ N   + RIYGTA+  ++ L ++L   EE+ KRDHR++ +EMDLF    E
Sbjct: 231 SIASTTYNGEINGKRMIRIYGTAFPDKKMLNEFLKNREEAMKRDHRRIGQEMDLFIFDTE 290

Query: 261 DGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMF 319
              G+ F+   G  I   LI YM     +++++E+ T  V    +W+QSGH+D Y+ +MF
Sbjct: 291 RAPGMPFYTPNGAVIRNELIKYMGEINARNNWQEVWTAHVFRDLIWKQSGHYDKYKNDMF 350

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHG 379
             +     +++   + LKPMNCPGH+ +F  G+ SYR++PV+  E G+VYR E SG + G
Sbjct: 351 LFQ-----LENGEHYGLKPMNCPGHITIFQRGIYSYRDMPVKYCEPGTVYRYEKSGEMGG 405

Query: 380 LMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK------DFGFEKIMVKLSTRPEK 433
           L R RGFT DD H F  ++Q+  E   +  +I  ++       +F F+ + V     PE 
Sbjct: 406 LTRPRGFTIDDGHGFLRQDQILEEVSSLLGMIHEVFNTILGNVEFSFD-LSVMDKNSPEN 464

Query: 434 ----------------RVGSD----------------ALWDDAENIMKGVLDTIKNSSQD 461
                           R GS                 ++WD A   ++  L++       
Sbjct: 465 YLIEYKCRNCGNVFMLRAGSSKIECPKCSSKDLEMDFSMWDAATENLRKALES------R 518

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
            +N     GE AFYGPK +  +KDA+ R WQ  TIQ+DF +P  F+ +Y+NS  +K  PV
Sbjct: 519 NLNYKEYPGEAAFYGPKIDVHVKDALNRFWQLSTIQLDFFMPINFDLYYINSDGKKERPV 578

Query: 522 MIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLS 581
           +IHRA++GS ERFI I++E++ G LP WLSPIQ+ V  ++ +  EYA+ I +L   +++ 
Sbjct: 579 IIHRAIYGSYERFIAILLEHYNGKLPTWLSPIQSYVIPVSENYNEYAESINSLFVKNNIR 638

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
            + D  +ETI+ KI+     +   II+ G+KE   +S+ IR     T +
Sbjct: 639 SKIDLSSETISKKIKMIRKMRPSYIIVVGEKEEHNKSVSIRNRKDKTIE 687


>gi|167957086|ref|ZP_02544160.1| threonyl-tRNA synthetase [candidate division TM7 single-cell
           isolate TM7c]
          Length = 603

 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 224/594 (37%), Positives = 344/594 (57%), Gaps = 57/594 (9%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQIEKKMQE 128
           L  +RHS AHIMA+AVQ +WP+ +  +GP IE+GFYYD +      S D L +IEK+M++
Sbjct: 6   LKSMRHSLAHIMAQAVQRLWPQAKFGVGPAIENGFYYDIYLDGATISEDSLPKIEKEMRK 65

Query: 129 IIARDSPFLKQYLSHEKARELFESKKEAYKVEILESI----------------------P 166
           II+ + PF ++ ++ ++A +  +  ++ +K+E+L  +                      P
Sbjct: 66  IISANYPFERRDVAIDEAIDWAKENQQNFKIELLNDLKRSGTTVASELSGEDIGSANEAP 125

Query: 167 AK-ENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAW 225
           +K + V+LY QG++ DLCRG HV STG+V  F KL KVAGAYWRG+ N   + RIYG A+
Sbjct: 126 SKVKAVSLYSQGDYVDLCRGGHVDSTGKVGAF-KLTKVAGAYWRGNENNLQMQRIYGVAF 184

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMR 284
            TQ+EL +YL  +E +++RDHRKL R++DL+  +   G G+  +  +G  + + +  Y  
Sbjct: 185 ATQEELDEYLENIEIAKQRDHRKLGRDLDLYTTSPLVGVGLPLFTPRGTILREVMSQYSN 244

Query: 285 R-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPG 343
           + + K  +E++ TP +  + L+++SGHW  +   +F VK  + + +     ALKPMNCP 
Sbjct: 245 QLRQKFGFEKVWTPHITKKDLYEKSGHWAKFGEELFLVKSQETSDE----MALKPMNCPH 300

Query: 344 HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE 403
           H  +F    +SYR++PVR  E  + YR+E +G L GL RVR  TQDD+HVFC  +Q+  E
Sbjct: 301 HTQIFASRPRSYRDMPVRYLETTTDYRDEKTGELGGLSRVRSLTQDDSHVFCRPDQIEEE 360

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDA------LWDDAENIMKGVLDTIKN 457
              I+NL+ S  ++  +E I +KL  R   R  SD+      LWD A+  +K  ++ +  
Sbjct: 361 ---INNLL-SAAREL-YESIDMKLRVRLSYRDDSDSYLGDIDLWDSAQGQLKSAVERVG- 414

Query: 458 SSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK 517
                ++     GE AFYGPK +++  DAIGR+ Q  T+Q+DF  P RF   YV+ +   
Sbjct: 415 -----LDYFEQEGEAAFYGPKIDFMATDAIGREHQVATVQLDFVQPQRFGLEYVDINGNS 469

Query: 518 CHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLL-- 575
             PVM+H A+ GSIERF+ + IE+  G  P W +P Q  + TI  S + Y  +I  +L  
Sbjct: 470 TTPVMVHCALLGSIERFLSVFIEHTGGWFPFWAAPEQVRILTINDSVLGYVDKITTILSE 529

Query: 576 -------KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
                  K + +   +D RNE++  KIRE +  KIP+ +I G K+     + IR
Sbjct: 530 TTLTKPVKYNDVRFTSDIRNESLGKKIREATSMKIPVQLIVGPKDMEAGEVSIR 583


>gi|156120825|ref|NP_001095559.1| probable threonyl-tRNA synthetase 2, cytoplasmic [Bos taurus]
 gi|189083595|sp|A6QNM8|SYTC2_BOVIN RecName: Full=Probable threonyl-tRNA synthetase 2, cytoplasmic;
           AltName: Full=Threonine--tRNA ligase; Short=ThrRS;
           AltName: Full=Threonyl-tRNA synthetase-like protein 2
 gi|151556799|gb|AAI48907.1| TARSL2 protein [Bos taurus]
 gi|296475416|gb|DAA17531.1| threonyl-tRNA synthetase-like 2 [Bos taurus]
          Length = 724

 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 225/569 (39%), Positives = 330/569 (57%), Gaps = 22/569 (3%)

Query: 5   IKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           I +   DG ++K      T   VA  IS+ LA+  V   +NG++ DL  P+  + ++E++
Sbjct: 160 ITVRVADGRTVKGEAWKTTPYQVAAEISQELAETTVVAKVNGELWDLDRPLEGDATVELL 219

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQ 121
           T ED  + AV  HS AH++ EA++  +  + +   P  +  F+YD + +++  SS EL  
Sbjct: 220 TFEDEEARAVYWHSSAHVLGEALELHYGGL-LCCSPPGDGSFHYDVYLEDRAVSSAELPV 278

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +E   Q II    PF +  +S +   +LF+  K  +K  IL+   A    T+YR G   +
Sbjct: 279 LESMCQAIIKEQQPFERLEVSTKVLLDLFKYNK--FKCRILKEKVATPTTTVYRCGPLVE 336

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LC+GPHVR TG +K   K+ K + AYW  +    ML R+YG ++  +Q +  +    EE+
Sbjct: 337 LCKGPHVRHTGTIK-VIKIFKNSLAYWADNPEMEMLQRVYGVSFPDEQRMAAWEELQEEA 395

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVL 300
             RDHR + +E +LF   +   G  F+  +G  I+ TLI ++R +  + ++ E+ +P + 
Sbjct: 396 RARDHRTIGKEQELFFFHDLSPGSCFFLPRGACIYNTLIDFIREQHHQRNFTEVLSPNMY 455

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
              LW+ SGHW  Y  NMF      D  KD  TFALKPMNCPGH  +F H  +S+RE+P+
Sbjct: 456 SCKLWEASGHWQHYSENMFTF----DIDKD--TFALKPMNCPGHCLMFAHRPRSWREMPI 509

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLA+FG ++RNEPSG+L GL  VR F QDDAH+FCT  Q+  E       + S+Y  FGF
Sbjct: 510 RLADFGVLHRNEPSGALSGLTCVRRFQQDDAHIFCTVGQLEEEIKGCLQFLQSVYSTFGF 569

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
               + LSTRPE  +G   LWD+AE  ++  L  ++     +IN     GEGAFYGPK +
Sbjct: 570 -SFQLNLSTRPENFLGKIELWDEAEKQLQNSL--MEFGKPWKINP----GEGAFYGPKID 622

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIGIMI 539
             +KDA+GR  QC TIQ+DF LP RFN  YV+    +K +PV+IH+A+ GS+ER I I+ 
Sbjct: 623 LEIKDALGRYHQCATIQLDFQLPIRFNLTYVSKDGDDKKNPVIIHQAILGSVERMIAILS 682

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYA 568
           EN+ G  P WLSP Q +V  +  +  +YA
Sbjct: 683 ENYGGKWPFWLSPRQVMVIPVGPTCEKYA 711


>gi|296228691|ref|XP_002759919.1| PREDICTED: threonyl-tRNA synthetase, mitochondrial isoform 1
           [Callithrix jacchus]
          Length = 718

 Score =  394 bits (1013), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 228/654 (34%), Positives = 350/654 (53%), Gaps = 28/654 (4%)

Query: 2   PSDIKLTFPDGS-IKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
           P  IK++ P G  +     + T   +A  IS +LA  AVA  +NG++ DL  P+   S +
Sbjct: 58  PRTIKISLPGGQKVDAVAWNTTPYQLARQISSTLADTAVAAQVNGELYDLERPLETDSDL 117

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF--DKEQPFSSD 117
             +T + P   AV  HS  H++  A +     V +  GP  E+GFY+DF   KE+     
Sbjct: 118 RFLTFDSPEGKAVFWHSSTHVLGAAAEQFLGAV-LCRGPSTENGFYHDFFLGKERTIRGS 176

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           EL  +E+  QE+ A   PF +   S ++   LF  K   +K+ ++E        T+Y  G
Sbjct: 177 ELPVLERICQELTAAAQPFRRLEASRDQLHRLF--KDNPFKLHLIEEKITGPTATVYGCG 234

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
              DLCRGPH+R TGQ+     L   +  +    +    L R+ G ++ T + L  +  +
Sbjct: 235 TLVDLCRGPHLRHTGQIGGLKLLSNSSSLWRSSGAPE-TLQRVSGISFPTAELLRAWEAW 293

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINT 296
            E++  +DHR++ +E +LF   E   G  F+  +G +++  L++++R +  +  + E+ T
Sbjct: 294 REKAGLQDHRRIGKEQELFFFHELSPGSCFFLPRGTRVYNALVAFIRAEYARRGFFEVKT 353

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVK-----------CADDTIKDLRTFALKPMNCPGHV 345
           P +    LW+QSGHW+ Y+ +MFAV+               T     T ALKPMNCP H 
Sbjct: 354 PTLFSTKLWEQSGHWEHYQEDMFAVQPPGSDRPASSQSDHSTRHTTDTLALKPMNCPAHC 413

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +F H  +S+RELP+RLA+FG+++R E SG L GL R+R F QDDAH+FCT +Q+  E  
Sbjct: 414 LMFAHRPRSWRELPLRLADFGALHRAEASGGLCGLTRLRCFQQDDAHIFCTTDQLEAEIQ 473

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
              + + S+Y   GF    + LSTRP   +G   LWD AE +++  L          +N+
Sbjct: 474 SCLDFLRSVYAVLGF-SFRLALSTRPSGFLGDPCLWDQAEQVLQQALKEFGEPWD--LNS 530

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
           G    +GAFYGPK +  L DA+GR  QCGTIQ+DF LP RF+  Y         PV+IHR
Sbjct: 531 G----DGAFYGPKIDVHLHDALGRPHQCGTIQLDFQLPLRFDLQYKGQAGALERPVLIHR 586

Query: 526 AVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD 585
           AV GS+ER +G++ E+ +G  PLWLSP Q +V  + +   EYA+E    L++  L  + D
Sbjct: 587 AVLGSVERLLGVLAESCRGKWPLWLSPFQVVVIPVGTEQEEYARETQQSLQAAGLVCDLD 646

Query: 586 FRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
             +  T++ +IR   +       + G KE S+ ++ IR   +    + SL +A+
Sbjct: 647 ADSRLTLSRRIRRAQLAHYNFQFVVGQKEQSKSTVNIRTRDNRLLGEWSLPEAV 700


>gi|315054053|ref|XP_003176401.1| threonyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
 gi|311338247|gb|EFQ97449.1| threonyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
          Length = 765

 Score =  394 bits (1012), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 225/654 (34%), Positives = 345/654 (52%), Gaps = 59/654 (9%)

Query: 20  HATGSDVAESISRSLAKKAVAVAINGK-VCDLSDPV-REGSIEIITPEDPRSLAVIRHSC 77
           H+T     + I + L+   V   ++GK + DL  P+ R+  I  +  +      V  HS 
Sbjct: 100 HSTPGSFLKDIPKELSSSVVIAKLDGKELWDLDRPLERDCRIRYLPFDSVEGREVFWHSS 159

Query: 78  AHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQP--FSSDELAQIEKKMQEIIARDSP 135
           AH + EA +  +    ++ GP    GF+YD    +       +   ++ K  +I      
Sbjct: 160 AHALGEACECHY-GCLLSHGPPTAQGFFYDMAIPEGGVVHQTDYPALDAKTAKIFKEKQS 218

Query: 136 FLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVK 195
           F +  +S +  +++F   K  YK+  ++++   E+ T+YR G   DLCRGPH+++TG++K
Sbjct: 219 FDRLEVSKDNLKKMFGYSK--YKLHYIDNLVEGESSTVYRCGTLVDLCRGPHIQNTGKIK 276

Query: 196 KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDL 255
              K+ + + AY+ GD     L RI G A+  ++ L ++L FLEE+EKR+H K+ +E +L
Sbjct: 277 AM-KITQNSSAYFLGDQTNDALQRIRGVAFPDKKLLQEHLKFLEEAEKRNHLKIGKEQEL 335

Query: 256 FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSY 314
           F   E   G  F    G KIF  L   +R +  K  Y+E+ +P + D  +W+QSGHW  Y
Sbjct: 336 FFFDEVSPGCPFLLPNGTKIFNALQKLLRTEYRKRGYQEVQSPNMYDVGIWRQSGHWAHY 395

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
           + +MF +        + R +ALKPMNCPGH  +F H  +SYRELP+R+A+FG ++RNE S
Sbjct: 396 KDDMFKLDV------EKRDWALKPMNCPGHCIMFGHRERSYRELPLRMADFGVLHRNEAS 449

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
           G+LHGL RVR F QDD H+FCT  Q+  E   + + + +IY  FGF    +KLSTRPEK 
Sbjct: 450 GALHGLTRVRKFQQDDTHIFCTDNQIIGEIEGLFDFLRAIYGLFGFS-FKLKLSTRPEKY 508

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           +G    WD AE  ++  L   K +  +     +  G+GAFYGPK +  + DA+ R+ QC 
Sbjct: 509 LGKLETWDFAEAQLREALTKFKGAEWE-----IDEGDGAFYGPKIDITISDALKREHQCA 563

Query: 495 TIQVDFNLPSRFNAFYV--------------------------------------NSHSE 516
           TIQ+D+ LP  F   Y+                                      N    
Sbjct: 564 TIQLDYQLPLNFKLEYMTGETIPKSAAPAAPQAPQAEAKPEGGSNSSQAQPSDSSNPGPG 623

Query: 517 KCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLK 576
           +  PVMIHRA+ GS ERF GI+IE+F G  P WLSP Q ++  + +SA +Y +E+  +L+
Sbjct: 624 RARPVMIHRAIIGSFERFFGILIEHFGGKWPFWLSPRQILIVPVMASANDYVEELQEILR 683

Query: 577 SHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
              L+++ D    T+  KIR   + +   I + G +E   RS+ IR     ++Q
Sbjct: 684 GDKLNVDIDLSGHTMQKKIRNGQLAQYNFIFVVGAQEKESRSVNIRNRDDPSSQ 737


>gi|327308738|ref|XP_003239060.1| threonyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
 gi|326459316|gb|EGD84769.1| threonyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
          Length = 764

 Score =  394 bits (1012), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 224/652 (34%), Positives = 346/652 (53%), Gaps = 57/652 (8%)

Query: 20  HATGSDVAESISRSLAKKAVAVAINGK-VCDLSDPV-REGSIEIITPEDPRSLAVIRHSC 77
           H+T     + I + L+   V   ++GK + DL  P+ R+  I  +  +      V  HS 
Sbjct: 101 HSTPGSFLKDIPKELSSSVVIAKLDGKELWDLDRPLERDCRIRYLPFDSVEGREVFWHSS 160

Query: 78  AHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQP--FSSDELAQIEKKMQEIIARDSP 135
           AH + EA +  +    ++ GP    GF+YD    +    +  +   ++ K  +I      
Sbjct: 161 AHALGEACECQY-GCLLSHGPPTAQGFFYDMAIPEGGVVTQADYPLLDAKTAKIFKEKQS 219

Query: 136 FLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVK 195
           F +  +S E  +++F   K  YK+  ++++   E+ T+YR G   DLCRGPH+++TG++K
Sbjct: 220 FDRLEVSKENLKKMFGYSK--YKLHYIDNLIEGESSTVYRCGTLVDLCRGPHIQNTGKIK 277

Query: 196 KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDL 255
              K+ + + AY+ GD     L RI G A+  ++ L ++L FLEE+EKR+H K+ +E +L
Sbjct: 278 AM-KITQNSSAYFLGDQTNDALQRIRGVAFPDKKLLQEHLKFLEEAEKRNHLKIGKEQEL 336

Query: 256 FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSY 314
           F   E   G  F    G KIF  L   +R +  K  Y+E+ +P + D  +W+QSGHW  Y
Sbjct: 337 FFFDEVSPGCPFLLPNGTKIFNALQKLLRTEYRKRGYQEVQSPNMYDVGIWRQSGHWAHY 396

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
           + +MF +        + R +ALKPMNCPGH  +F H  +SYRELP+R+A+FG ++RNE S
Sbjct: 397 KDDMFKLDV------EKRDWALKPMNCPGHCIMFGHRERSYRELPLRMADFGVLHRNEAS 450

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
           G+LHGL RVR F QDD H+FCT  Q+  E   + + + +IY  FGF    +KLSTRPEK 
Sbjct: 451 GALHGLTRVRKFQQDDTHIFCTDNQIMEEIEGLFDFLRAIYGLFGFS-FKLKLSTRPEKY 509

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           +G    WD AE  ++  L   K +  +     +  G+GAFYGPK +  + DA+ R+ QC 
Sbjct: 510 LGKLETWDFAEAQLREALTKFKGADWE-----IDEGDGAFYGPKIDITISDALKREHQCA 564

Query: 495 TIQVDFNLPSRFNAFYVNSHS------------------------------------EKC 518
           TIQ+D+ LP  F   Y+   +                                     + 
Sbjct: 565 TIQLDYQLPLNFKLEYMTGETVPKSAAPATSKAEAKPAEGDSNPAQAQPSDSSTPGPGRA 624

Query: 519 HPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSH 578
            PV+IHRA+ GS ERF GI+IE+F G  P WLSP Q ++  + +SA +Y +E+  +L+  
Sbjct: 625 RPVVIHRAIIGSFERFFGILIEHFGGKWPFWLSPRQILIVPVMASANDYVEELQEILRGD 684

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
            L+++ D    T+  KIR   + +   I + G +E   RS+ IR     ++Q
Sbjct: 685 KLNVDIDLSGHTMQKKIRNGQLAQYNFIFVVGAQEKESRSVNIRNRDDPSSQ 736


>gi|149200279|ref|ZP_01877300.1| threonyl-tRNA synthetase [Lentisphaera araneosa HTCC2155]
 gi|149136643|gb|EDM25075.1| threonyl-tRNA synthetase [Lentisphaera araneosa HTCC2155]
          Length = 603

 Score =  394 bits (1012), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 221/590 (37%), Positives = 334/590 (56%), Gaps = 21/590 (3%)

Query: 69  SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQIEKKMQ 127
           +L  IRHS AH++A+AVQ ++P+V++  GP IE GFYYDFD  E+ F+ ++L +IEK+M+
Sbjct: 6   NLYKIRHSMAHVLAQAVQEVYPKVKLGFGPPIETGFYYDFDFSEEEFAENKLKEIEKRMK 65

Query: 128 EIIARDSPFLKQYLSHEKARELFESKKEA-YKVEILESIPAK--ENVTLYRQGEWFDLCR 184
           +II R   F       E A    E   E  YK+E + ++ ++  E  + Y  G + DLC 
Sbjct: 66  KIIGRKQEFHYSETDIEGAVAKLEDLGEGEYKIENVRNLHSRGVEKFSFYENGNFADLCE 125

Query: 185 GPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           GPHV +TG +  K FKL +VAGAYW G      L+RIY   + T +EL  +L     +E+
Sbjct: 126 GPHVETTGDLPAKAFKLDRVAGAYWLGSEKNKQLTRIYALCFETPEELQSFLERRRIAEQ 185

Query: 244 RDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
            DH+KL +E+D+FH  E  G G+  W   G  I   +  Y R  ++K  Y+ ++TP +  
Sbjct: 186 FDHKKLGKELDIFHFDEKVGKGLALWMPNGTIIRDEIEKYAREMEMKYGYQRVSTPHIAS 245

Query: 302 QHLWQQSGHWDSYRANMF---AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           + L+Q SGH   Y  +MF    +   DD  ++   + LK MNCP H  +++   +SY+EL
Sbjct: 246 EKLFQTSGHLPYYADSMFPPMELNEGDDA-ENSEKYYLKAMNCPYHHLIYSARPRSYKEL 304

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P RL E+G+ YR E SG L GL+RVR  T +DAHV+ T++Q   E   +  + +  Y+ F
Sbjct: 305 PYRLCEYGTCYRYEKSGELSGLLRVRCMTMNDAHVYLTEDQFEEEFRSMVKMYMEFYETF 364

Query: 419 GFEKIMVKLSTR--PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
            F     +LS R   +K VG  A+WD AE ++  V+D +       +   V  GE AFYG
Sbjct: 365 KFSDYSFRLSVRDDSDKFVGDPAVWDQAEALLAKVMDELG------LEYFVGEGEAAFYG 418

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFN--LPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           PK +   K+ +GR+    TIQVDF      +F   YV+S + +  P++IHRA   + ERF
Sbjct: 419 PKIDVQFKNLMGREETLSTIQVDFQSACKEKFALKYVDSDNTEKEPIIIHRAPLSTHERF 478

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
           I  ++E + G  P W +P+Q  +  +  S +E+   IAN L      +E D  N T N K
Sbjct: 479 ISFIMEYYGGAFPAWCAPVQVCILPVQDSCMEFTNSIANELTRDLYRVEIDDSNNTFNKK 538

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IR ++ +KIPI++I G++E ++ ++ +RR+GS     VS  + + I   E
Sbjct: 539 IRTNTKRKIPILLIIGEQEVADNTVTVRRYGSRDQITVSRDEFVAIFKAE 588


>gi|256372009|ref|YP_003109833.1| threonyl-tRNA synthetase [Acidimicrobium ferrooxidans DSM 10331]
 gi|256008593|gb|ACU54160.1| threonyl-tRNA synthetase [Acidimicrobium ferrooxidans DSM 10331]
          Length = 623

 Score =  394 bits (1012), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 224/617 (36%), Positives = 345/617 (55%), Gaps = 30/617 (4%)

Query: 36  KKAVAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVA 95
           +   A + +G++ DL D    G+  ++    P    V+RHS AH++A+A+  +WP   +A
Sbjct: 9   RPVAARSDDGELVDL-DRAGPGAT-LVAASTPEGRQVLRHSGAHVVAKAISRLWPGTHLA 66

Query: 96  IGPIIEDGFYYDFD--KEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESK 153
           +GP  E+GF+YD +    +    D+LA I  +++ I+A D PF +  L  ++AR   +  
Sbjct: 67  VGPATEEGFFYDVELPGGRSLDDDDLAAIAAEVERIVAADEPFERIELELDEARR--QLA 124

Query: 154 KEAYKVEILESIPAKEN---------VTLYRQG-EWFDLCRGPHVRSTGQVKKFFKLMKV 203
            + +K+EIL+ I A E          V++YR G ++ DLCRGPHV STG +    +L++V
Sbjct: 125 DQPFKLEILDRIAAGEAETDAASGSAVSIYRTGADFIDLCRGPHVPSTGHLSAL-RLLRV 183

Query: 204 AGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIA-EDG 262
           +GAYWRGD + P L R+ GTA+ + + L  +L  + E+E+RDHR+L +E  LF    E G
Sbjct: 184 SGAYWRGDEHGPRLQRVAGTAFESPEALEAWLTQIAEAERRDHRRLGQEQRLFFFPREIG 243

Query: 263 SGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
            G+  +   G  +   L  + RR      Y  + TP V    L++ SGH   YR +M+  
Sbjct: 244 GGLPVFEPDGAWVRYRLEEFSRRIHFAAGYVPVWTPHVTRGALFELSGHLGWYRESMYPA 303

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
              DD       + LKPM+CP H+  +    +SYRELP+RL E  +VYR E SG+LHGL 
Sbjct: 304 MELDDE-----EYFLKPMSCPMHILAYRQHPRSYRELPLRLFELATVYRYERSGTLHGLA 358

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALW 441
           RVR  TQDDAH+FC  +Q+ +E   + +L + +   FG      +LSTRP K VGSD  W
Sbjct: 359 RVRSLTQDDAHIFCRGDQLADELTGVLDLAMRLLGAFGLNDFEAELSTRPAKSVGSDEDW 418

Query: 442 DDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFN 501
           + A +  +  L+      +  +   V  GEGAFY PK +  L+DAIGR WQ  T+QVD  
Sbjct: 419 EFATSAARSALE------RSGLTYRVAEGEGAFYAPKIDIHLRDAIGRRWQLSTVQVDLQ 472

Query: 502 LPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT 561
           LP RF+  Y  + +    P MIHRA+FGS+ERF+ I+IE+F G LP WL      +  + 
Sbjct: 473 LPQRFDLGYQGADNRMERPFMIHRALFGSVERFLAILIEHFDGELPPWLVREPVRILPVA 532

Query: 562 SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
             A  +A+E+   L +  +  +    +E +  ++R    +++P I++ G+ + +  S+G+
Sbjct: 533 HEAAGWAEEVRAALVAAGVGAQVVAADEPLGARVRRARTERVPYIVVVGNDDVAAHSVGL 592

Query: 622 RRFGSTTTQKVSLLDAI 638
            R   +  + V+L  AI
Sbjct: 593 TRPDRSQARGVALETAI 609


>gi|20429011|emb|CAC79651.1| threonyl-tRNA synthetase [Oryza sativa Japonica Group]
          Length = 531

 Score =  394 bits (1012), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 206/525 (39%), Positives = 312/525 (59%), Gaps = 18/525 (3%)

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           I+ + Q+ +A   PF +  +S  +A E+F   K  +KVEI+  +P  + +T+YR G   D
Sbjct: 18  IDAQAQKAVAEKQPFERIEVSRAEALEMFAENK--FKVEIINELPEDKTITVYRCGPLVD 75

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ +T  VK F   +K + +YWRG ++R  L R+YG ++   + L +Y + LEE+
Sbjct: 76  LCRGPHIPNTSFVKAF-ACLKASSSYWRGKADRESLQRVYGISFPDSKRLKEYKHLLEEA 134

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
           +KRDHR L +  DLF   +   G  F+   G  I+  L+ ++R++ +D  Y+E+ +P + 
Sbjct: 135 KKRDHRLLGQTQDLFFFHQLSPGSCFFLPHGAIIYNKLMDFLRQQYRDRGYQEVLSPNIY 194

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  LW+ SGH  +Y+ NMF  +       + + F LKPMNCPGH  +F H ++SYRELP+
Sbjct: 195 NMQLWETSGHAANYKENMFVFEI------EKQEFGLKPMNCPGHCLMFEHRVRSYRELPL 248

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+A+FG ++RNE SG+L GL RVR F QDDAH+FC + Q+ +E   + + I  +Y+ FGF
Sbjct: 249 RMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCRESQIKDEVKAVLDFINYVYEIFGF 308

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
            K  ++LSTRPEK +G    W+ AE  +   L+      Q  IN     G+GAFYGPK +
Sbjct: 309 -KYELELSTRPEKYLGDIETWNKAEQQLTEALNEFGKPWQ--INE----GDGAFYGPKID 361

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC-HPVMIHRAVFGSIERFIGIMI 539
             + DA+ R +QC T+Q+DF LP RF   Y      K   PVMIHRA+ GS+ER   I++
Sbjct: 362 IGVFDALKRKFQCATLQLDFQLPLRFKLTYSAEDEAKLERPVMIHRAILGSVERMFAILL 421

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E++ G  PLWLSP QAIV +I+S++VEYA+++   +      +  D  + TI  K+RE  
Sbjct: 422 EHYNGKWPLWLSPRQAIVCSISSNSVEYAKQVRVRIHEAGFHVAIDETDRTIQKKVREAQ 481

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           + +   I++ G +EA    + +R         VS+ D I    +E
Sbjct: 482 LAQFKYILVVGAQEAETGQVSVRVRDKAELATVSIDDIITRFKEE 526


>gi|312077291|ref|XP_003141239.1| threonyl-tRNA synthetase [Loa loa]
 gi|307763596|gb|EFO22830.1| threonyl-tRNA synthetase [Loa loa]
          Length = 681

 Score =  394 bits (1012), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 226/641 (35%), Positives = 356/641 (55%), Gaps = 29/641 (4%)

Query: 5   IKLTFPDGSIKNFPV-HATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           I++T PDG +        T   +AE ISR  A  AV   +NG+V DL  P   + +++I+
Sbjct: 43  IEITLPDGKVLGGESWRTTPLMIAEQISRGFADSAVVAKVNGEVWDLDRPFECDATLQIL 102

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQ 121
             +D     V  HS AHIM EA++  +    +  GP I +GFYYD  KE    + D+  +
Sbjct: 103 KFDDDEGKQVFWHSSAHIMGEAMER-YCGGHLCYGPPILEGFYYDMWKEGSAITPDDFPK 161

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +E+ ++ ++    PF +  +S E   ++F+  K  +KV I+         T+YR G   D
Sbjct: 162 LEQIIKCVVKDKQPFERLVVSKEDLLQMFKYNK--FKVRIINEKITTPFTTVYRCGPLID 219

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHVR TG+VK    ++K + +YW G S+   L RIYG ++   ++L ++    EE+
Sbjct: 220 LCRGPHVRHTGKVKAL-SVIKTSSSYWEGRSDAESLIRIYGISFPDSKQLKEWQRLQEEA 278

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVL 300
            KRDHRK+ R+ +L+       G  FW+ KG  I+ +L +++R++  K  + E+ +P + 
Sbjct: 279 AKRDHRKIGRDQELYFFHPLSPGSAFWYPKGAHIYNSLCNFIRKEYRKRGFTEVISPNMY 338

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  LW+QSGHW+ Y  NMF +    +T      F LKPMNCPGH  +++H  +++ ELP+
Sbjct: 339 NSKLWEQSGHWEHYSDNMFKIDIEKET------FGLKPMNCPGHCLMYSHMPRTHNELPL 392

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD-FG 419
           R A+FG ++R +    +  +     F QDDAH+FC ++Q+  E +   + +   Y D FG
Sbjct: 393 RYADFGVLHRKKTVEEITII-----FQQDDAHIFCRQDQVVEEIMNCIDFLKYAYNDVFG 447

Query: 420 FEKIMVKLSTRPE-KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           F    + LSTRPE   +G    W+ AE+ +K  L+   +  +  +N G    +GAFYGPK
Sbjct: 448 F-TFKLNLSTRPEVGYLGDIETWNSAEDKLKEALNA--SGHKWELNPG----DGAFYGPK 500

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +  ++DA+ R  QC TIQ+DF LP RF+  Y + +SE+  PVMIHRA+ GSIER   I+
Sbjct: 501 IDITIQDALRRLHQCATIQLDFQLPIRFDLSYFDENSERQRPVMIHRALLGSIERMTAIL 560

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF-RNETINYKIRE 597
            EN+ G  P WLSP QA V T+  S  +Y + +   +      +E D   ++T+N +IR 
Sbjct: 561 AENYGGKWPFWLSPRQAKVITVHESQNDYGRVVQRKIYEAGFEVEFDADSSDTLNKQIRN 620

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
             + +   I++ G  EA   ++ +R   +    ++ L D I
Sbjct: 621 AQLAQFNFILVVGPTEARNGTVNVRTRDNAVRGEIKLEDLI 661


>gi|296489553|gb|DAA31666.1| threonyl-tRNA synthetase, mitochondrial [Bos taurus]
          Length = 718

 Score =  392 bits (1007), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 226/635 (35%), Positives = 346/635 (54%), Gaps = 28/635 (4%)

Query: 5   IKLTFPDGS-IKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEII 62
           IK++ P G  +       T   +A+ IS +LA  AVA  +NG+  DL  P+   S +  +
Sbjct: 61  IKISLPGGQKVDAVAWKTTPYQLAQQISSNLADTAVAAQVNGEPYDLERPLETDSDLRFL 120

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF--DKEQPFSSDELA 120
           T +  +   V  HS  H++  A + +   V +  GP  E GFY+DF   KE+     EL 
Sbjct: 121 TFDSAQGKKVFWHSSTHVLGAAAEQLLGAV-LCQGPSTECGFYHDFFLGKERTVKGSELP 179

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            +E+  QE+ A   PF +   S  + R+LF  K   +K+ ++E        T+Y  G   
Sbjct: 180 VLERFCQELTAAAQPFRRLEASRAQLRQLF--KDNPFKLRLIEEKVTGPTATVYGCGMLV 237

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+R TGQ+    KL+  + + W+       L R+ G ++ T +EL  +  + EE
Sbjct: 238 DLCRGPHLRHTGQIGGL-KLLSNSSSVWKFPDAPETLQRVSGISFPTAEELRAWEEWREE 296

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQV 299
           +E RDHR++ +E +LF   E   G  F+  +G +++  L+++++ +  +  + E+ TP +
Sbjct: 297 AELRDHRRIGKEQELFFFHELSPGSCFFLPRGTRVYNALVAFIKAEYTRRGFSEVKTPTL 356

Query: 300 LDQHLWQQSGHWDSYRANMFAVK-----------CADDTIKDLRTFALKPMNCPGHVAVF 348
               LW+ SGHW+ YR +MFA++                     T ALKPMNCP H  +F
Sbjct: 357 FSAKLWELSGHWEHYREDMFALQPPGLDRPSSSQSDHSASPHTDTLALKPMNCPAHCLMF 416

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
            H  +S+RELP+RLA+FG+++R E SGSL GL R+R F QDDAH+FC  +Q+  E     
Sbjct: 417 AHRPRSWRELPLRLADFGALHRAEASGSLGGLTRLRCFQQDDAHIFCAPDQLEAEIRGCL 476

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
           + + S+Y   GF   M  LSTRP   +G   LWD AE +++  L+    +  D     + 
Sbjct: 477 DFLHSVYTILGFSFHMA-LSTRPSGFLGEPCLWDQAEQVLQQALEEF-GAPWD-----IS 529

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
            G+GAFYGPK +  ++DA+GR  QCGTIQ+DF LP RF+  Y         PV+IHRAV 
Sbjct: 530 PGDGAFYGPKIDVHVRDALGRPHQCGTIQLDFQLPLRFDLQYKGQLGALERPVLIHRAVL 589

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRN 588
           GS+ER +G++ E+  G  PLWLSP Q +V  + +   EYA+E    L++  L  + D  +
Sbjct: 590 GSVERMLGVLAESCGGKWPLWLSPFQVVVIPVGTEQEEYAREAQQSLRAAGLVGDLDADS 649

Query: 589 E-TINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
             T++ +IR   +       + G +E S+R++ IR
Sbjct: 650 GLTLSRRIRRAQLAHYNFQFVVGQREQSKRTVNIR 684


>gi|297663737|ref|XP_002810324.1| PREDICTED: LOW QUALITY PROTEIN: threonyl-tRNA synthetase,
           mitochondrial-like [Pongo abelii]
          Length = 719

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 227/638 (35%), Positives = 343/638 (53%), Gaps = 27/638 (4%)

Query: 2   PSDIKLTFPDGS-IKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
           P  IK++ P G  I     + T   +A  IS +LA  AVA  +NG+  DL  P+   S +
Sbjct: 58  PRTIKISLPGGQKIDAVAWNTTPYQLARQISSTLADTAVAAQVNGEPYDLERPLETDSDL 117

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF--DKEQPFSSD 117
             +T + P   AV  HS  H++  A +     V +  GP  E GFY+DF   KE+     
Sbjct: 118 RFLTFDSPEGKAVFWHSSTHVLGAAAEQFLGAV-LCRGPSTEYGFYHDFFLGKERTIRGS 176

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           EL  +E+  QE+ A   PF     +       F  +   +K+ ++E        T+Y  G
Sbjct: 177 ELPVLERICQELTAAAQPFPGGLEAFTDLPSTF-FQDNPFKLHLIEERVTGPTATVYGCG 235

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
              DLC+GPH+R TGQ+     L   +  +    +    L R+ G ++ T + L  +  +
Sbjct: 236 TLVDLCQGPHLRHTGQIGGLKLLSNSSSLWRSSGAPE-TLQRVSGISFPTTELLRAWEAW 294

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINT 296
            EE+E RDHR++ +E +LF   E   G  F+  +G +++  L++++R +  +  + E+ T
Sbjct: 295 REEAELRDHRRIGKEQELFFFHELSPGSCFFLPRGTRVYNALVAFIRAEYARRGFSEVKT 354

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKC----------ADDTIKDLR-TFALKPMNCPGHV 345
           P +    LW+QSGHW+ Y+ +MFAV+           +DD+ + +  T ALKPMNCP H 
Sbjct: 355 PTLFSTKLWKQSGHWEHYQEDMFAVQPPGSDRPPSSQSDDSTRHITDTLALKPMNCPAHC 414

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +F H  +S+RELP+RLA+FG+++R E SG L GL R+R F QDDAH+FCT +Q+  E  
Sbjct: 415 LMFAHRPRSWRELPLRLADFGALHRAEASGGLGGLTRLRCFQQDDAHIFCTTDQLEAEIQ 474

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
              + + S+Y   GF    + LSTRP   +G   LWD AE ++K  L          +N+
Sbjct: 475 SCLDFLRSVYAVLGF-SFHLALSTRPSGFLGDPCLWDQAEQVLKQALKEFGEPWD--LNS 531

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
           G    +GAFYGPK +  L DA+GR  QCGTIQ+DF LP RF+  Y         PV+IHR
Sbjct: 532 G----DGAFYGPKIDVHLHDALGRPHQCGTIQLDFQLPLRFDLQYKGQAGALERPVLIHR 587

Query: 526 AVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD 585
           AV GS+ER +G++ E+  G  PLWLSP Q +V  + +   EYA+E    L++  L  + D
Sbjct: 588 AVLGSVERLLGVLAESCGGKWPLWLSPFQVVVIPVGTEQEEYAKEAQQSLRAAGLVSDLD 647

Query: 586 FRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
             +  T++ ++R   +       + G KE S+R++ IR
Sbjct: 648 ADSGLTLSRRVRRAQLAHYNFQFVVGQKEQSKRTVNIR 685


>gi|295109520|emb|CBL23473.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Ruminococcus
           obeum A2-162]
          Length = 653

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 227/627 (36%), Positives = 350/627 (55%), Gaps = 25/627 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T  DGS K +    +  D+A  IS  LA+ A A  +NG+V DL   +  +  + I+T +
Sbjct: 3   ITLKDGSKKEYFEAKSVIDIAYDISEGLARAACAGEVNGEVVDLRTVLDSDCELNILTAK 62

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D + LAV+RH+ +H++A+AVQ+++PE +VAIGP I+ GFYYDF  E PFS ++L  IEK+
Sbjct: 63  DEKGLAVLRHTASHVLAQAVQNLYPEAKVAIGPSIDTGFYYDFAHE-PFSREDLDAIEKE 121

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M++II + +   +   S E A   F+ K E YKVE++E +P    ++ Y QG+W DLC G
Sbjct: 122 MKKIIKKGAKIERFTKSREDAIAYFKEKNEPYKVELIEDLPEDAEISFYSQGDWTDLCAG 181

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PH+ S   VK F KL+  + AYWRG     ML+RIYGTA+ ++ EL ++L  +EE+++RD
Sbjct: 182 PHLMSVKGVKAF-KLLSSSSAYWRGSEKNAMLTRIYGTAYASKDELKEHLEQMEEAKRRD 240

Query: 246 HRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQH 303
           H KL REM +F   +  G G+      G  + Q L  ++   + K  Y    TP +    
Sbjct: 241 HNKLGREMKIFTTVDVIGQGLPLIMPNGVIMMQELQRWIEDEETKRGYVRTKTPLMAKSD 300

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           L++ SGHWD Y+  MF +    D   D   FAL+PM CP    V+     SYR+LP+R  
Sbjct: 301 LYKISGHWDHYKDGMFVL---GDEENDKEVFALRPMTCPFQYYVYKAEQHSYRDLPLRYG 357

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM---FNECLKIHNLIISIYKDFGF 420
           E  +++RNE SG +HGL RVR FT  + H+    +QM   F +C+ +    + +    G 
Sbjct: 358 ETSTLFRNEDSGEMHGLTRVRQFTISEGHLIVRPDQMVKEFKDCIALAQYCLQV---LGV 414

Query: 421 EK-IMVKLS----TRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           E+ +   LS    T  EK +G   +W++ E  ++ +L  +     + +      GE AFY
Sbjct: 415 EEDVTYHLSKWDPTNREKYIGEPEVWEETEGHIRQMLQELNIPFTEDV------GEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +   K+  G++    TIQ D  L  +F+ +Y++ + +K  P +IHR   G  ER +
Sbjct: 469 GPKVDINAKNVYGKEDTMITIQWDALLAEQFDMYYIDENGDKKRPYIIHRTSMGCYERTL 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
             +IE + G  P WL P Q  V  I+     YA ++   +K   +    D R+E + YKI
Sbjct: 529 AWLIEKYAGMFPTWLCPEQVRVIPISEKFNAYADKVEAQMKEAGIRCSVDRRSEKMGYKI 588

Query: 596 REHSIKKIPIIIICGDKEASERSIGIR 622
           RE  ++++P +++ G KE  E  + +R
Sbjct: 589 REARLERVPYMLVVGAKEEEEGKVSVR 615


>gi|261368006|ref|ZP_05980889.1| threonine--tRNA ligase [Subdoligranulum variabile DSM 15176]
 gi|282569994|gb|EFB75529.1| threonine--tRNA ligase [Subdoligranulum variabile DSM 15176]
          Length = 596

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 213/593 (35%), Positives = 344/593 (58%), Gaps = 27/593 (4%)

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQI 122
           P+D + L V+RH+ AHIMA+A++ ++PE   A GP  E+GFYYD D  +   + ++LA I
Sbjct: 14  PQD-QELHVLRHTAAHIMAQAIKRLYPEADFAFGPATENGFYYDVDLGDTKLTDEDLAAI 72

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M++I   + P     L  ++A +L + ++E YK+E +  +  +   + ++QGE+ D+
Sbjct: 73  EKEMRKICKENLPIKPFILPRDEALKLMQERQEHYKIEHMSDLADETEFSFFQQGEYVDM 132

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPH+  T  +K F K+ + +GAYW+ D    ML+RI G A++ Q+EL ++    +E+ 
Sbjct: 133 CIGPHLTYTKALKAF-KITQQSGAYWKNDKENKMLTRINGVAFHNQEELEEWEKQQQEAR 191

Query: 243 KRDHRKLAREMDLFHIAED--GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQV 299
           +RDHRK+ +EM LF + +D  G G+  +   G+ ++Q L  Y+++K ++  Y  + TP +
Sbjct: 192 ERDHRKIGKEMRLF-MTDDLVGRGLPMFLPNGYIVWQQLEDYIKQKERERGYLHVMTPCI 250

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
              +L++ SGHWD YR NMF     +       ++ L+PMNCP H+ ++ +   SYR+LP
Sbjct: 251 GTVNLYRTSGHWDHYRENMFPAMEMEG-----ESYVLRPMNCPHHMMIYANQPHSYRQLP 305

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+ E    +R E SG+L G+ R R F Q+DAH+F T EQ+ +E   +  LI  +YKDF 
Sbjct: 306 IRIGEIAHDFRYESSGTLKGIERGRHFCQNDAHLFVTPEQIKDEVAAVCALIFDVYKDFH 365

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                  LS R     +K    DA+W+ AE  ++ VL  +     + I      GE AFY
Sbjct: 366 ITDYRCVLSLRDPADKKKYHDDDAMWNHAEQALREVLTELGIQFTEEI------GEAAFY 419

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G ++   T Q+DF LP++F+  YV+    +  PV++HRA+ GS++RF+
Sbjct: 420 GPKLDVNVKPAVGAEYTLSTCQLDFCLPAKFHLTYVDKDGSEKTPVVLHRAILGSLDRFM 479

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
             +IE  KG  P WL+P+Q  V  ++   ++YA+E+ + LK+  +    D  NE I YKI
Sbjct: 480 AYLIEETKGRFPTWLAPVQVKVLPVSEKTLDYAREVNDKLKAAGIRAVLDESNEKIGYKI 539

Query: 596 R-EHSIKKIPIIIICGDKEASERSIGIR-RFGSTTTQKVSLLDAIPILTKESL 646
           R      + P +++ G KE    +I +R R G TT      LDA     K+ +
Sbjct: 540 RLAQQEDRAPYMLVLGAKEVEAGNISVRNRKGETTAMD---LDAFVAQVKDEI 589


>gi|205356549|ref|ZP_03223312.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CG8421]
 gi|205345554|gb|EDZ32194.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CG8421]
          Length = 510

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 206/505 (40%), Positives = 312/505 (61%), Gaps = 20/505 (3%)

Query: 145 KARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVA 204
           K+  L + + +  K E+L  IP    V++Y+QGE+ DLCRGPHV +T +  +FFKL +VA
Sbjct: 18  KSEALAKFQNDDLKQEVLLRIPDG-AVSIYKQGEFEDLCRGPHVPNT-KFLRFFKLTRVA 75

Query: 205 GAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GS 263
           GAY  GD  R ML+RIYGTA+  ++ L +YL  +EE++KRDHRKL  E+ LF   ++ G 
Sbjct: 76  GAYLGGDEKREMLTRIYGTAFADKESLKEYLTIIEEAKKRDHRKLGTELKLFTFDDEIGG 135

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           G+  W   G ++ ++ + +M  KI     YE +  P++L    W+ SGH+ +Y+ NM+  
Sbjct: 136 GLPIWLSNGARL-RSKLEHMLYKIHRLRGYEPVRGPELLKADAWKISGHYANYKENMYFT 194

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           +       D + + +KPMNC GH+ ++   ++SYR+LP++  E+G V+R+E SG LHGL 
Sbjct: 195 QI------DEQEYGIKPMNCVGHIKIYQSDVRSYRDLPLKFFEYGVVHRHEKSGVLHGLF 248

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALW 441
           RVR FTQDDAH+FC   Q+  + L+I   + ++ K F F   M ++ST+PEK +G D +W
Sbjct: 249 RVREFTQDDAHIFCMPSQIKEQVLEILAFVDNLMKLFDFSYEM-EISTKPEKAIGDDEIW 307

Query: 442 DDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFN 501
           + A   +K  LD      +  +  G+  G GAFYGPK +  + DA+ R WQCGTIQVDFN
Sbjct: 308 EIATKALKEALD------EQGLKYGIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDFN 361

Query: 502 LPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT 561
           LPSRF   Y +S +EK  PVM+HRA+ GS ERFIGI+ E+  G  P +++P    +  I 
Sbjct: 362 LPSRFKLEYTDSDNEKKQPVMLHRAILGSFERFIGILTEHCAGEFPFFIAPTAVGIVPIG 421

Query: 562 SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
            + + YA+EI   L   ++  E   +NE+++ KIR    +K+P+I++ GD E ++RS+ +
Sbjct: 422 EAHIAYAKEIQKELLELNIDSEVYEKNESLSKKIRIAEKQKLPMILVLGDDEVAKRSVAL 481

Query: 622 RRFGSTTTQKVSLLDAIPILTKESL 646
           R   +   + +S LD    L KE +
Sbjct: 482 RDRRAKEQKNLS-LDEFIKLVKEKM 505


>gi|331232891|ref|XP_003329107.1| threonyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309308097|gb|EFP84688.1| threonyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 765

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 235/648 (36%), Positives = 342/648 (52%), Gaps = 61/648 (9%)

Query: 5   IKLTFPDGSIKN-FPVHATGSDVAESISRSLAKKAV--AVAINGK----VCDLSDPVREG 57
           I +  P G  K       T  ++A S+S+SLA++ V   V + G     + DL  P+   
Sbjct: 112 IMVQLPQGDPKEAVSWQTTPLEIARSLSKSLAERIVIAEVTLPGVAKPILWDLERPLESS 171

Query: 58  -SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSS 116
            S+ ++  E      V  HS AH++ EA +  +    + IGP  ++GF+Y          
Sbjct: 172 CSLRLLDFETDEGKRVFWHSSAHVLGEAAEKHY-GCHLCIGPPTDEGFFY---------- 220

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES-IPAKENVTLYR 175
            E+       + I A D P L      +K  E+    K  YK  ++ S IP   + T+YR
Sbjct: 221 -EMGMGLSGERAIQATDYPSL------QKLAEMAIYNK--YKTYLINSKIPDGSSTTVYR 271

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLM-----------KVAGAYWRGDSNRPMLSRIYGTA 224
            G   DLC GPH+ +TGQ+K F  L            K + +Y+ GDS    L RIYG +
Sbjct: 272 CGPMIDLCVGPHIPNTGQIKAFSVLKICANLFASHNEKNSASYFLGDSANDSLQRIYGIS 331

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR 284
           +  ++ + +Y  FLEE+ KRDHRK+ ++ DLF   E   G  FW   G +I+ TL+ + +
Sbjct: 332 FPDKKAMAEYKKFLEEAAKRDHRKIGKDQDLFFFHELSPGSCFWLPHGTRIYNTLVEFFK 391

Query: 285 RKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPG 343
            +  K  Y+E+ +P + +  LWQ SGHW++Y  +MF +    +T      F LKPMNCPG
Sbjct: 392 SEYRKRGYDEVISPNMYNAKLWQTSGHWENYADSMFKLDIEKET------FGLKPMNCPG 445

Query: 344 HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE 403
           H  +F    +SYRELP+R+A+FG ++RNE SG+L GL RVR F QDDAH FCT EQ+ +E
Sbjct: 446 HCLIFGSRDRSYRELPIRMADFGVLHRNEASGALSGLTRVRRFCQDDAHHFCTTEQIDSE 505

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              I +L+ ++Y   GF    +KLSTRP+  +G   +W+ AE  +   LD      +  +
Sbjct: 506 MAGIFDLLKTVYGMLGF-TYKLKLSTRPDNYIGDLEVWNLAEKRLGQALDEFVGPGEWDV 564

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-------- 515
           +     G+GAFYGPK +  + DA+ R  QC TIQ+DF LP RF   Y             
Sbjct: 565 DP----GDGAFYGPKIDITISDALKRRHQCATIQLDFQLPERFKLQYRTDQGGQGAEAGA 620

Query: 516 -EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANL 574
            E+  PVMIHRA+ GS+ERF  I+ E+F G  P WLSP Q +V  + +    YAQE+A  
Sbjct: 621 EERKRPVMIHRAIMGSVERFTAILTEHFAGKWPFWLSPRQVMVIPVAAPHKAYAQEVAQK 680

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           L    L  + D  + T+  KIR   +     I++ G +E   RS+ +R
Sbjct: 681 LWDAGLYADADMSDATLPKKIRNGEVASYNFILVVGSEELESRSVNVR 728


>gi|156120539|ref|NP_001095415.1| threonyl-tRNA synthetase, mitochondrial [Bos taurus]
 gi|152941102|gb|ABS44988.1| threonyl-tRNA synthetase-like 1 [Bos taurus]
          Length = 718

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 226/635 (35%), Positives = 345/635 (54%), Gaps = 28/635 (4%)

Query: 5   IKLTFPDGS-IKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEII 62
           IK++ P G  +       T   +A+ IS +LA  AVA  +NG+  DL  P+   S +  +
Sbjct: 61  IKISLPGGQKVDAVAWKTTPYQLAQQISSNLADTAVAAQVNGEPYDLERPLETDSDLRFL 120

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF--DKEQPFSSDELA 120
           T +  +   V  HS  H++  A + +   V +  GP  E GFY+DF   KE+     EL 
Sbjct: 121 TFDSAQGKKVFWHSSTHVLGAAAEQLLGAV-LCQGPSTECGFYHDFFLGKERTVKGSELP 179

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            +E+  QE+ A   PF +   S  + R+LF  K    K+ ++E        T+Y  G   
Sbjct: 180 VLERFCQELTAAAQPFRRLEASRAQLRQLF--KDNPLKLRLIEEKVTGPTATVYGCGMLV 237

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+R TGQ+    KL+  + + W+       L R+ G ++ T +EL  +  + EE
Sbjct: 238 DLCRGPHLRHTGQIGGL-KLLSNSSSVWKFPDAPETLQRVSGISFPTAEELRAWEEWREE 296

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQV 299
           +E RDHR++ +E +LF   E   G  F+  +G +++  L+++++ +  +  + E+ TP +
Sbjct: 297 AELRDHRRIGKEQELFFFHELSPGSCFFLPRGTRVYNALVAFIKAEYTRRGFSEVKTPTL 356

Query: 300 LDQHLWQQSGHWDSYRANMFAVK-----------CADDTIKDLRTFALKPMNCPGHVAVF 348
               LW+ SGHW+ YR +MFA++                     T ALKPMNCP H  +F
Sbjct: 357 FSAKLWELSGHWEHYREDMFALQPPGLDRPSSSQSDHSASPHTDTLALKPMNCPAHCLMF 416

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
            H  +S+RELP+RLA+FG+++R E SGSL GL R+R F QDDAH+FC  +Q+  E     
Sbjct: 417 AHRPRSWRELPLRLADFGALHRAEASGSLGGLTRLRCFQQDDAHIFCAPDQLEAEIRGCL 476

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
           + + S+Y   GF   M  LSTRP   +G   LWD AE +++  L+    +  D     + 
Sbjct: 477 DFLHSVYTILGFSFHMA-LSTRPSGFLGEPCLWDQAEQVLQQALEEF-GAPWD-----IS 529

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
            G+GAFYGPK +  ++DA+GR  QCGTIQ+DF LP RF+  Y         PV+IHRAV 
Sbjct: 530 PGDGAFYGPKIDVHVRDALGRPHQCGTIQLDFQLPLRFDLQYKGQLGALERPVLIHRAVL 589

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRN 588
           GS+ER +G++ E+  G  PLWLSP Q +V  + +   EYA+E    L++  L  + D  +
Sbjct: 590 GSVERMLGVLAESCGGKWPLWLSPFQVVVIPVGTEQEEYAREAQQSLRAAGLVGDLDADS 649

Query: 589 E-TINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
             T++ +IR   +       + G +E S+R++ IR
Sbjct: 650 GLTLSRRIRRAQLAHYNFQFVVGQREQSKRTVNIR 684


>gi|197097988|ref|NP_001125825.1| threonyl-tRNA synthetase, cytoplasmic [Pongo abelii]
 gi|55729334|emb|CAH91401.1| hypothetical protein [Pongo abelii]
          Length = 563

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 216/547 (39%), Positives = 317/547 (57%), Gaps = 23/547 (4%)

Query: 81  MAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQIEKKMQEIIARDSPFLKQ 139
           M EA++ ++    +  GP IE+GFYYD + +E   SS++ + +E   ++II     F + 
Sbjct: 1   MGEAMERVYGGC-LCYGPPIENGFYYDMYLEEGGVSSNDFSSLEALCKKIIKEKQAFERL 59

Query: 140 YLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFK 199
            +  E    +F+  K  +K  IL         T+YR G   DLCRGPHVR TG++K   K
Sbjct: 60  EVKKETLLAMFKYNK--FKCRILNEKVNTPTTTVYRCGPLIDLCRGPHVRHTGKIKAL-K 116

Query: 200 LMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIA 259
           + K +  YW G ++   L RIYG ++   + L ++  F EE++ RDHRK+ R+ +L+   
Sbjct: 117 IHKNSSTYWEGKADMETLQRIYGISFPDPKMLKEWEKFQEEAKNRDHRKIGRDQELYFFH 176

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANM 318
           E   G  F+  KG  I+  LI ++R +  K  ++E+ TP + +  LW  SGHW  Y  NM
Sbjct: 177 ELSPGSCFFLPKGAYIYNALIEFIRSEYRKRGFQEVVTPNIFNSRLWMTSGHWQHYSENM 236

Query: 319 FAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLH 378
           F+ +   +       FALKPMNCPGH  +F+H  +S+RELP+RLA+FG ++RNE SG+L 
Sbjct: 237 FSFEVEKEL------FALKPMNCPGHCLMFDHRPRSWRELPLRLADFGVLHRNELSGALT 290

Query: 379 GLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD 438
           GL RVR F QDDAH+FC  EQ+ +E     + + ++Y  FGF    + LSTRPEK +G  
Sbjct: 291 GLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSVFGF-SFKLNLSTRPEKFLGDI 349

Query: 439 ALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
            +WD AE  ++  L+      +  +N+    G+GAFYGPK +  +KDAIGR  QC TIQ+
Sbjct: 350 EVWDQAEKQLENSLNEFGEKWE--LNS----GDGAFYGPKIDIQIKDAIGRYHQCATIQL 403

Query: 499 DFNLPSRFNAFYVNSH--SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI 556
           DF LP RFN  YV SH   +K  PV++HRA+ GS+ER I I+ EN+ G  P WLSP Q +
Sbjct: 404 DFQLPIRFNLTYV-SHDGDDKKRPVIVHRAILGSVERMIAILTENYGGKWPFWLSPRQVM 462

Query: 557 VTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEAS 615
           V  +  +  EYAQ++           + D     T+N KIR   + +  +I++ G+KE  
Sbjct: 463 VVPVGPTCDEYAQKVRQQFHDAKFMADIDLDPGCTLNKKIRNAQLAQYNLILVVGEKEKI 522

Query: 616 ERSIGIR 622
             ++ IR
Sbjct: 523 SGTVNIR 529


>gi|126313772|ref|XP_001370758.1| PREDICTED: similar to Threonyl-tRNA synthetase-like 1 [Monodelphis
           domestica]
          Length = 717

 Score =  390 bits (1003), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 217/617 (35%), Positives = 340/617 (55%), Gaps = 26/617 (4%)

Query: 22  TGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHI 80
           T   VA  IS +LA  AVA  +NG   D+  P+  +  I+ +T + P   A+  HS AH+
Sbjct: 77  TPYQVALQISSTLADTAVAARVNGVAYDMDRPLEGDADIDFLTFDSPEGKALFWHSSAHV 136

Query: 81  MAEAVQSIWPEVQVAIGPIIEDGFYYD--FDKEQPFSSDELAQIEKKMQEIIARDSPFLK 138
           +  A + +   + +  GP    GFY+D      +     EL  +E+  Q I+A   PF +
Sbjct: 137 LGAAAEHLLSAL-LCRGPSTSCGFYHDIALQGNRTVRGSELPILEQTCQRIVAAAHPFRR 195

Query: 139 QYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFF 198
              S E+  +LF  K   +K++++E    ++  T+Y  G   DLC+GPH+R TGQ+    
Sbjct: 196 LVASREQLCQLF--KDNPFKLQLIEDKVKEQMATVYGCGTSVDLCKGPHLRHTGQIGVLK 253

Query: 199 KLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI 258
            L   + ++      +  L R+YG ++ T + L  +    EE+  RDHR++ ++ +LF  
Sbjct: 254 LLTNSSSSWIGSSGVQEPLQRVYGISFPTSEGLRAWEKQREEAAARDHRRIGKDQELFFF 313

Query: 259 AEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRAN 317
            E   G  F+  +G +++  L++++R +  +  + E+ TP +    LW+QSGHW  Y  +
Sbjct: 314 HELSPGSCFFLPRGTRVYNALMTFIRDEYARRGFSEVRTPTLFSTKLWEQSGHWKHYSGD 373

Query: 318 MFAVKCAD-DTIKDLRT----------FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFG 366
           MF ++  D D   D +            ALKPMNCP H  +F H  +S+RELP+RLA+FG
Sbjct: 374 MFVLRPPDPDGPADCQNNCSTNHPQSMLALKPMNCPAHCLIFAHRPRSWRELPLRLADFG 433

Query: 367 SVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK 426
           +++R E SG L GL R+R F QDDAH+FC ++Q+ +E     + + S+Y  FGF   +V 
Sbjct: 434 ALHRTEASGGLGGLTRLRRFQQDDAHIFCAQDQLESEIRGCLDFLRSVYTVFGFSFHLV- 492

Query: 427 LSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDA 486
           LSTRP   +G   LWD AE I++  LD         +N G    +GAFYGPK +  ++DA
Sbjct: 493 LSTRPSSFLGESFLWDQAEQILQQALDEFGEPWD--LNPG----DGAFYGPKIDVHIQDA 546

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNL 546
           +GR  QCGTIQ+DF LP RF   Y+        PV+IHRAV GS+ER +G++ EN+ G  
Sbjct: 547 LGRPHQCGTIQLDFQLPLRFGLQYMGQAGVLERPVLIHRAVLGSVERMLGVLTENYGGKW 606

Query: 547 PLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPI 605
           PLWLSP+QA+V  + +    YA+E+   L++  L+ + D     T++ ++R   + +   
Sbjct: 607 PLWLSPLQAMVIPVGAEQEGYAREVQEALQAAGLAGDLDKDPSLTLSRRVRRAQLSQYNF 666

Query: 606 IIICGDKEASERSIGIR 622
             + G +E S  ++ IR
Sbjct: 667 QFVVGPREQSRGTVNIR 683


>gi|294901580|ref|XP_002777422.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
 gi|239885058|gb|EER09238.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
          Length = 836

 Score =  390 bits (1002), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 225/633 (35%), Positives = 343/633 (54%), Gaps = 74/633 (11%)

Query: 47  VCDLSDPVREGS--IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGF 104
           V DLS P+ EGS  +E++  + P       HS AHI+ EA++  +    + IGP +E+GF
Sbjct: 150 VWDLSRPL-EGSCKLELLKFDSPEGKDTFWHSSAHILGEALEQEYG-CYLTIGPPLENGF 207

Query: 105 YYD-FDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE 163
           YYD F        ++  +IEK++  I+  D  F +  ++ E+A ELF      +K++++ 
Sbjct: 208 YYDGFYGNHKLGPNDYEKIEKRIASIVKEDQKFQRLVVTKEEALELFAYN--PFKLQLIS 265

Query: 164 S-IPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYG 222
           + +P     ++YR G   DLCRGPH+  TG V K F + K + AYW G +    L R+Y 
Sbjct: 266 TKVPDGSLTSVYRIGSLVDLCRGPHLPRTG-VAKAFWVNKNSQAYWLGKAENDSLQRVYA 324

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLIS 281
            ++ T++ L +Y   +EE+ KRDHR + ++ DLF      S G  FW   G  I+  L+ 
Sbjct: 325 ISFPTEKMLKEYKKNVEEAMKRDHRLIGKKQDLFFFHPTMSPGSCFWTSHGAVIYNKLVD 384

Query: 282 YMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
           ++RR+ +   ++E+ TP +  + L+QQSGH  +Y+ NM+++    +T      + LKPMN
Sbjct: 385 FIRREYRLRGFDEVITPNIFSEALFQQSGHCGNYKDNMYSMNIEGET------WYLKPMN 438

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
           CPGH  +F+  ++SY+ELP+R+A+FG ++RNE SG+L GL RVR F QDDAH+FC  +Q+
Sbjct: 439 CPGHCMIFDQKVRSYKELPIRMADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCRPDQV 498

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQ 460
            +E       +  +Y  FGF+   V LSTRP+K +GS A+WD AEN +K  L+       
Sbjct: 499 QDEITHALEFLKFVYNTFGFD-FSVCLSTRPKKAIGSRAIWDTAENGLKNALEACG---- 553

Query: 461 DRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFY---------- 510
             I+  +  G+GAFYGPK +  L+DA+ R  QCGTIQ+DFNLP RFN  Y          
Sbjct: 554 --IDYDLNPGDGAFYGPKIDIRLRDALNRYHQCGTIQLDFNLPIRFNLQYRTAETEESGD 611

Query: 511 -----------VNSHSEKC-----------------------------HPVMIHRAVFGS 530
                       + H EK                               PVM+HRA+ GS
Sbjct: 612 AHSVSEAANSPADDHQEKAGQNSAAVENVGSKAKADEITLGELKHGFERPVMVHRAILGS 671

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
           IER   I+ E++ G  P WLSP Q +V  ++    +YA  +   L       + D    T
Sbjct: 672 IERCTAILTEHYGGKWPFWLSPRQVMVVPVSDKYSDYADYLRKQLVRLGYEADADLSTRT 731

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRR 623
           +N K+RE  +     I + G+KE ++ ++ +R+
Sbjct: 732 MNKKVREAQVAAYNYIAVVGEKEQNDLTVTLRK 764


>gi|294948976|ref|XP_002785990.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
 gi|239900098|gb|EER17786.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
          Length = 836

 Score =  390 bits (1002), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 224/633 (35%), Positives = 343/633 (54%), Gaps = 74/633 (11%)

Query: 47  VCDLSDPVREGS--IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGF 104
           V DLS P+ EGS  +E++  + P       HS AHI+ EA++  +    + IGP +E+GF
Sbjct: 150 VWDLSRPL-EGSCKLELLKFDSPEGKDTFWHSSAHILGEALEQEYG-CYLTIGPPLENGF 207

Query: 105 YYD-FDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE 163
           YYD F        ++  +IEK++  I+  D  F +  ++ E+A ELF      +K++++ 
Sbjct: 208 YYDGFYGNHKLGPNDYEKIEKRIASIVKEDQKFQRLVVTKEEALELFAYN--PFKLQLIS 265

Query: 164 S-IPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYG 222
           + +P     ++YR G   DLCRGPH+  TG  K F+ + K + AYW G +    L R+Y 
Sbjct: 266 TKVPDGSLTSVYRIGSLVDLCRGPHLPRTGVAKAFW-VNKNSQAYWLGKAENDSLQRVYA 324

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLIS 281
            ++ T++ L +Y   +EE+ KRDHR + ++ DLF      S G  FW   G  I+  L+ 
Sbjct: 325 ISFPTEKMLKEYKKNVEEAMKRDHRLIGKKQDLFFFHPTMSPGSCFWTSHGAVIYNKLVD 384

Query: 282 YMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
           ++RR+ +   ++E+ TP +  + L+QQSGH  +Y+ NM+++    +T      + LKPMN
Sbjct: 385 FIRREYRLRGFDEVITPNIFSEALFQQSGHCGNYKDNMYSMNIEGET------WYLKPMN 438

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
           CPGH  +F+  ++SY+ELP+R+A+FG ++RNE SG+L GL RVR F QDDAH+FC  +Q+
Sbjct: 439 CPGHCMIFDQKVRSYKELPIRMADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCRPDQV 498

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQ 460
            +E       +  +Y  FGF+   V LSTRP+K +GS A+WD AEN +K  L+       
Sbjct: 499 QDEITHALEFLKFVYNTFGFD-FSVCLSTRPKKAIGSRAIWDTAENGLKNALEACG---- 553

Query: 461 DRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFY---------- 510
             I+  +  G+GAFYGPK +  L+DA+ R  QCGTIQ+DFNLP RFN  Y          
Sbjct: 554 --IDYDLNPGDGAFYGPKIDIRLRDALNRYHQCGTIQLDFNLPIRFNLQYRTAETEESGD 611

Query: 511 -----------VNSHSEKC-----------------------------HPVMIHRAVFGS 530
                       + H EK                               PVM+HRA+ GS
Sbjct: 612 VHSVSEAANSPADDHQEKAGQNSAAVENVGSKAKADEITLGELKHGFERPVMVHRAILGS 671

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
           IER   I+ E++ G  P WLSP Q +V  ++    +YA  +   L       + D    T
Sbjct: 672 IERCTAILTEHYGGKWPFWLSPRQVMVVPVSDKYSDYADYLRKQLVRLGYEADADLSTRT 731

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRR 623
           +N K+RE  +     I + G+KE ++ ++ +R+
Sbjct: 732 MNKKVREAQVAAYNYIAVVGEKEQNDLTVTLRK 764


>gi|302829308|ref|XP_002946221.1| hypothetical protein VOLCADRAFT_102823 [Volvox carteri f.
           nagariensis]
 gi|300269036|gb|EFJ53216.1| hypothetical protein VOLCADRAFT_102823 [Volvox carteri f.
           nagariensis]
          Length = 691

 Score =  390 bits (1001), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 220/649 (33%), Positives = 360/649 (55%), Gaps = 44/649 (6%)

Query: 3   SDIKLTFPDG----SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EG 57
           + IK+  PDG    ++K     AT  D+A+ IS SLAKK V   ++G+  DL  P+  + 
Sbjct: 52  AQIKVIMPDGKERSAVKGV---ATPMDIAKEISASLAKKVVVAEVDGQPWDLLRPLEGDC 108

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSS 116
           ++++ + +D        HS AH++ + ++  +  V + IGP +++GFYYD +   +  + 
Sbjct: 109 ALKLFSFDDAEGRDAFWHSSAHVLGQVLELEFG-VDLTIGPALDEGFYYDCYMGNRTLAE 167

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
            + ++IEK+ +  +     F +  +S ++A  +F+  K  +K+EI++ +PA   +T+YR 
Sbjct: 168 GDKSRIEKRYEAAVKESQKFQRVVVSRDEALSMFQENK--FKIEIIQGLPADATITVYRV 225

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           G   DLC GPH+ ST  +K    +  ++ A+WRGD  R  L R+YG  +   + L +Y +
Sbjct: 226 GPMVDLCSGPHLPSTSYLKAA-AVTSMSRAFWRGDVKREPLQRVYGITFPEPKLLKEYQH 284

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEIN 295
            +EE++KRDHR L  + +LF       G  F+   G +I+ TL+S++R K  K +YEE+ 
Sbjct: 285 RIEEAKKRDHRVLGVQQELFFFHPLSPGSCFFLPHGARIYNTLMSFIREKYWKYEYEEVI 344

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP + +  LW+ SGH D YR NMFA +       +   + LKPMNCPGH  +F +  +SY
Sbjct: 345 TPNIYNFDLWRTSGHADHYRENMFAFEI------EKAEYGLKPMNCPGHCLMFANRTRSY 398

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP+RLA+FG ++RNE SG+L GL RV                  +E      L+  +Y
Sbjct: 399 RELPLRLADFGVLHRNEFSGALQGLTRV-----------------MSEVQGFLKLLGEVY 441

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
             FG +  M  LSTRPE  +G   LW+ AE  +   L++     +  +N G    +GAFY
Sbjct: 442 DVFGLDYTMA-LSTRPEGYLGDIELWNRAETALTEALNS--TGREWVLNPG----DGAFY 494

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  + DA+ R +QC T+Q+DF LP RF   Y +       PV++HRAV GS+ER  
Sbjct: 495 GPKIDITVYDALRRKFQCATVQLDFQLPIRFGLEYASESGTLERPVIVHRAVLGSVERMF 554

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            I+ E+F G  P WL+P Q +V  I+ ++ +YA ++   L++  L ++ D  +  +  K+
Sbjct: 555 AILTEHFAGKWPFWLNPRQVMVVPISENSSQYAFDVRRELRAAGLHVDVDASDRKMQKKV 614

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           RE  + +   I++ G+ E +E+++ +R   +       L D   ++ +E
Sbjct: 615 REAQLAQYNYILVVGEAEKAEQTVNVRTRDNVVHGMFKLEDVRTLMVEE 663


>gi|212534744|ref|XP_002147528.1| threonyl-tRNA synthetase, putative [Penicillium marneffei ATCC
           18224]
 gi|210069927|gb|EEA24017.1| threonyl-tRNA synthetase, putative [Penicillium marneffei ATCC
           18224]
          Length = 724

 Score =  389 bits (1000), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 226/652 (34%), Positives = 354/652 (54%), Gaps = 49/652 (7%)

Query: 3   SDIKLTFPDGSIKNFPV-----HATGSDVAESISRSLAKKAVAVAINGK-VCDLSDPV-R 55
           SDI +T   G  K   +      +T     + I + ++   V   I+ K + DL+ P+ +
Sbjct: 54  SDITITLDIGDGKPSTIIGKSWESTPGAFLKDIPKEISTNIVIAKIDDKELWDLNRPLEK 113

Query: 56  EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF---DKEQ 112
           +  +  +  + P    V  HS AH + EA +  +    ++ GP    GF+YD    +   
Sbjct: 114 DCKVSYLPFDHPEGRDVFWHSSAHCLGEACELEFG-CLLSHGPPTPQGFFYDMAIPNGRA 172

Query: 113 PFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVT 172
              SD  A ++KK  +I      F +  ++ E  +++F   K  YK+  + ++   E  T
Sbjct: 173 VLPSD-WAPLDKKAAQIFKERQSFDRLEVTKENLKKMFAYSK--YKLHYINNLVEGEKST 229

Query: 173 LYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELT 232
           +YR G   DLCRGPH+++T ++K F K+M+ + AY+ GD +   L RI G A+  +  + 
Sbjct: 230 VYRCGTLVDLCRGPHIQNTNKIKTF-KIMQNSSAYFLGDQSNDSLQRIRGVAFPDKNGMK 288

Query: 233 QYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDY 291
           ++L FLEE+EKR+H+K+ +E +LF   +   G  F    G KIF  L   +R +  K  Y
Sbjct: 289 EHLKFLEEAEKRNHQKIGKEQELFFFDDVSPGCPFLLPNGTKIFNALQKLLRSEYRKRGY 348

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           +E+ TP + D  +W+ SGHW  Y  +MF +        + R +ALKPMNCPGH  +F H 
Sbjct: 349 QEVQTPNMYDVSIWKTSGHWAHYSDDMFKLDV------EKREWALKPMNCPGHFMLFGHR 402

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI 411
            +SYRELP+R+A+FG ++RNE SG+L GL RVR F QDD H+FCT EQ+ +E   + + +
Sbjct: 403 ERSYRELPLRIADFGVLHRNEASGALSGLTRVRKFQQDDTHIFCTAEQISSEIEGLFDFL 462

Query: 412 ISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
            SIY  FGF    +KLSTRPEK +G    W+ AE+ ++  L+       + IN     G+
Sbjct: 463 KSIYGLFGF-TFKLKLSTRPEKYMGELEAWNYAEDQLRQALNKFMGDDWE-INE----GD 516

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE--------------- 516
           GAFYGPK +  + DA+ R++QC TIQ+D+  P  F   Y+ +  +               
Sbjct: 517 GAFYGPKIDITIADALKREFQCATIQLDYQAPINFKLEYITNEKQASADPKANNDGAEKA 576

Query: 517 ------KCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQE 570
                 +  PV+IHRA+ GS ERF+GI+IE+F G  P W+SP Q ++  +  +  +YA+E
Sbjct: 577 KETNVNRARPVVIHRAIIGSFERFLGILIEHFAGKWPFWISPRQILIVPVMPALNDYAKE 636

Query: 571 IANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           +  +L +  L+++ D    T+  KIR   + +   I + G +E   RS+ IR
Sbjct: 637 LQQILLADKLNVDVDVSGNTLQKKIRTGQLAQYNFIFVVGAQERDSRSVNIR 688


>gi|325679048|ref|ZP_08158642.1| threonine--tRNA ligase [Ruminococcus albus 8]
 gi|324109172|gb|EGC03394.1| threonine--tRNA ligase [Ruminococcus albus 8]
          Length = 648

 Score =  389 bits (1000), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 219/650 (33%), Positives = 354/650 (54%), Gaps = 19/650 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           IKLT  DGS+K        S++ + I   L K A  V ING+V DL   +  +   E++T
Sbjct: 2   IKLTLKDGSVKEIEQAMPASEIIKGIGMGLYKAACVVKINGEVKDLRTVIDSDCEFEVLT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +  +      H+ +H+MA+AV++++P+ ++  GP  E+GFYYDF  E+PF+  +L +I+
Sbjct: 62  FDSKQGKETFWHTASHLMAQAVKNLYPDAKLGRGPATENGFYYDFQVEKPFAPADLEKIQ 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-ENVTLYRQGEWFDL 182
            +M+ +        +  LSH++A +L + K E +K+E++E   +K E ++ YRQG++ DL
Sbjct: 122 AEMKRLAKEGYELERFELSHDEAVKLMQEKNEDFKLELIEKHDSKGEKLSFYRQGDFVDL 181

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPH+ S   +K   KL +  GAYW    +   +SRIYGTA+     L ++L  +EE++
Sbjct: 182 CAGPHIMSVAPIKAV-KLTQCTGAYWGKVEDGIQMSRIYGTAYPKASMLEEHLKQMEEAK 240

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVL 300
            RDH KL RE+D F   +  G G+     KG K+ QTL  ++   + +  Y+   TP + 
Sbjct: 241 LRDHNKLGRELDYFTTVDYIGQGLPILLPKGAKVIQTLQRWIEDEEYRRGYQLTKTPFMS 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            + L++ SGHWD YR  MF +   DD  K+   FAL+PM CP    VF +  +SYR+LP+
Sbjct: 301 KRELYKISGHWDHYRDGMFILGDPDDETKE--CFALRPMTCPFQYQVFLNRKRSYRDLPM 358

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM---FNECLKIHNL---IISI 414
           RL E  +++R E SG +HGL+RVR FT  + H+    EQ+   F  CL +       I +
Sbjct: 359 RLGETSTLFRKEDSGEMHGLIRVRQFTISEGHLIIRPEQLEDEFKGCLALAKYCLETIGL 418

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            +D  +       +    K  G+   W++A+  MK +LD I       ++  + + E AF
Sbjct: 419 AEDVSYRFSQWDPANPNNKYEGTAEQWEEAQGAMKKILDDIG------LDYEIGIDEAAF 472

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K+  G++    TIQ+D  +  +F   YV+   +   P +IHR   G  ER 
Sbjct: 473 YGPKLDIQIKNVFGKEDTLITIQIDMQIAKKFGMEYVDKDGKMKMPYIIHRTSVGCYERT 532

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
           + ++IE + G LPLWL+P Q  +  I     +YA E+A  ++   + +E D  ++ I  K
Sbjct: 533 LALLIEKYAGVLPLWLAPEQVRILPIKPEHNDYAYELAEEMRDLGMRVEVDGEDDNIGPK 592

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           I++    ++P + I GD E  +R++ +R         + + DAI  L +E
Sbjct: 593 IKQARFDRVPYMFIIGDNEVKDRTVTVRSRKEGELPAMPVADAIAKLKEE 642


>gi|156354210|ref|XP_001623293.1| predicted protein [Nematostella vectensis]
 gi|156209976|gb|EDO31193.1| predicted protein [Nematostella vectensis]
          Length = 559

 Score =  389 bits (1000), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 212/561 (37%), Positives = 323/561 (57%), Gaps = 25/561 (4%)

Query: 94  VAIGPIIEDGFYYDFDKE-QPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFES 152
           +  GP IE+G+YYD   E +  SS++ + ++   ++I     PF +  +  E   E+F  
Sbjct: 9   LCYGPPIEEGYYYDMHLEGRQVSSNDFSSLDNLTKKITKEKQPFERLEMKKEDLLEMF-- 66

Query: 153 KKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDS 212
           K   +K  IL +       T+YR G   DLCRGPHVR TG++K    + K +  YW G+ 
Sbjct: 67  KYNEFKCRILNNKVKTPTTTVYRCGPLIDLCRGPHVRHTGKIKSI-AVTKNSATYWEGNC 125

Query: 213 NRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKG 272
               L RIYG ++   +++ ++  F EE+ KRDHRK+ R+ +LF   E   G  F+  KG
Sbjct: 126 EAESLQRIYGISFPNDKQMKEWKKFQEEAAKRDHRKIGRDQELFFFHELSPGSCFFLPKG 185

Query: 273 WKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
             I+ TLI++++ +  K  ++E+ +P +    LW+ SGHW  Y  +MF+ +   ++    
Sbjct: 186 AVIYNTLINFIKEQYWKRGFQEVVSPNIYSTKLWETSGHWQHYSEHMFSFEVEKES---- 241

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
             +ALKPMNCPGH  +F+H  +S+RELP+R+A+FG ++RNE SG+L GL RVR F QDDA
Sbjct: 242 --YALKPMNCPGHCLMFDHRPRSWRELPLRMADFGVLHRNELSGTLSGLTRVRRFQQDDA 299

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
           H+FCT +Q+  E +   + +  +Y  FGF    + LSTRPEK +G   LW+ AE  ++  
Sbjct: 300 HIFCTADQIGQEIISCLDFLKHVYGVFGF-TFKLNLSTRPEKYLGKIELWNQAEKELEAA 358

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
           L+    +    +N     G+GAFYGPK +  ++DA+ R  QC TIQ+DF LP RFN  YV
Sbjct: 359 LNGFGQAWV--LNP----GDGAFYGPKIDIQIQDALRRYHQCATIQLDFQLPERFNLTYV 412

Query: 512 NSHS-EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQE 570
                E+  PV++HRA+ GS+ER I I+ E+F G  P WLSP QAIV  I     EYAQ+
Sbjct: 413 TGEGDERKRPVIVHRAILGSVERMIAILTESFGGKWPFWLSPRQAIVIPIGPKYDEYAQK 472

Query: 571 IAN--LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
           + +  L   +H+  + D    T+N K+R   + +   I + G+KEA+  ++ +R   +  
Sbjct: 473 VMSDILAAGYHVDADLD-HGTTLNKKVRNAQLAQYNFIFVVGEKEATTGTVNVRTRDNKV 531

Query: 629 TQKVS---LLDAIPILTKESL 646
             + S   +L+    LT E +
Sbjct: 532 HGEFSVEAVLNKFATLTSERV 552


>gi|111219789|ref|YP_710583.1| threonyl-tRNA synthetase [Frankia alni ACN14a]
 gi|111147321|emb|CAJ58970.1| Threonyl-tRNA synthetase (Threonine--tRNA ligase) [Frankia alni
           ACN14a]
          Length = 682

 Score =  389 bits (998), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 222/615 (36%), Positives = 336/615 (54%), Gaps = 40/615 (6%)

Query: 45  GKVCDLSD-PVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG 103
           G + DL+  P  +  +  +    P  LAV+RHS AH+MA+AVQ ++ E ++ IGP IE+G
Sbjct: 46  GTLRDLTAVPAVDTEVTAVPMSSPDGLAVLRHSTAHVMAQAVQDLFDEARLGIGPPIENG 105

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKAR-----------ELFES 152
           FYYDFD  +PF +++L +I+ +M+EI+ +   F ++ L+  +A            EL + 
Sbjct: 106 FYYDFDVPKPFQAEDLERIQARMREIVKQGQRFRRRVLTSREAAREELAAEPFKLELVDI 165

Query: 153 KKEAYKVEILESIPAKENVTLY-----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAG 205
           K EA      E       +T+Y     R GE  W DLCRGPH+ ST  +  F  L++ + 
Sbjct: 166 KGEASGAAATEV--GSGELTMYDNVDPRSGEVVWTDLCRGPHLPSTHLIPAF-ALLRNSA 222

Query: 206 AYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIA-EDGSG 264
           AYWRGD   P L RIYGTAW T+  L +YL  L E+ KRDHR++  ++DLF  + E G G
Sbjct: 223 AYWRGDEKNPQLQRIYGTAWPTRPALKEYLTALAEAAKRDHRRIGEDLDLFAFSPEIGKG 282

Query: 265 VIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKC 323
           +  W   G  I   L  + R+  +   Y  + TP +  + L+  SGH   Y  +++A   
Sbjct: 283 LPLWLPNGTIIRDELEGWARQTERRLGYRRVVTPHITQEDLYFLSGHLPYYAEDLYAPIQ 342

Query: 324 ADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRV 383
            +        + LKPMNCP H  V+    KSYRELP ++AE+G+VYR E SG LHGLMR 
Sbjct: 343 IEG-----ENYYLKPMNCPHHHMVYKARPKSYRELPYKIAEYGTVYRFERSGQLHGLMRA 397

Query: 384 RGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP---EKRVGSDA- 439
           RGFTQ+DAH++CT+EQ   + L++  +    Y+  G     + L+ R      +   DA 
Sbjct: 398 RGFTQNDAHIYCTREQAKEQFLEVMRMHDEYYRALGITDFYMVLALRDPANTTKYHDDAQ 457

Query: 440 LWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVD 499
           +W+DAE I +  +D      +  I     LG  A YGPK ++I++   G+++   T QVD
Sbjct: 458 MWEDAERITREAMD------ESGIPYVEELGGAAHYGPKVDFIIRSVTGKEFAASTNQVD 511

Query: 500 FNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTT 559
              P RF+  Y ++       V+IHRA  GS ERF+  + E+F G  P+WL+P Q  V  
Sbjct: 512 LYTPQRFDLKYHDADGTDKQVVVIHRAPLGSHERFVAFLTEHFGGAFPVWLAPEQVRVIP 571

Query: 560 ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSI 619
           I     EYA+ ++  L    + ++ D  +  +  ++R    +KIP+I++ G +E  E S+
Sbjct: 572 IMPELDEYAETVSQALLDADVRVDVDASDGRLPARVRTAVTRKIPLIVVVGRREVEEGSV 631

Query: 620 GIR-RFGSTTTQKVS 633
            +R R G  T+  ++
Sbjct: 632 SVRDRSGQETSMPLA 646


>gi|67475342|ref|XP_653365.1| threonyl-tRNA synthetase [Entamoeba histolytica HM-1:IMSS]
 gi|56470308|gb|EAL47979.1| threonyl-tRNA synthetase, putative [Entamoeba histolytica
           HM-1:IMSS]
          Length = 676

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 212/606 (34%), Positives = 337/606 (55%), Gaps = 22/606 (3%)

Query: 43  INGKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE 101
           +NGK+ DL+ P  E S +E +  ++  +  V  HS AH++ EA+++ + +  +  GP   
Sbjct: 82  VNGKLWDLTRPFEEDSTVEYLGFDNQEAHDVFWHSSAHLLGEAMETQY-KCYLHTGPATA 140

Query: 102 DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEI 161
             F+YD       S+ +  +++  ++  +     F +  ++ E+A ++F      YKV+I
Sbjct: 141 IDFFYDCKMNGAISAADFKKLQSLIEGYVREHQVFTRIEITKEEALKMFAYN--PYKVKI 198

Query: 162 LESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIY 221
           +E +P    +T Y+ G + DLCRGPH+ +   +K   K++     +  G +   +L RI+
Sbjct: 199 IEKLPEGSTITAYKNGSFVDLCRGPHLANAASIKAI-KILSSGSVHLDGTATGDLLQRIH 257

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLIS 281
             ++ T+  L +Y+   EE++KRDHR + R+ DLF       G  FW   G +I+  L+ 
Sbjct: 258 AVSFPTKDLLKEYIKRAEEADKRDHRLIGRQQDLFFFHVLSPGSCFWLPHGTRIYNKLVE 317

Query: 282 YMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
            MR + +   Y+E+ TP +    LW+ SGHW  Y+ +MF+ +C      + +TFALKPMN
Sbjct: 318 LMRSEYRVLGYQEVITPNIFLSTLWETSGHWQHYKDDMFSFEC------EKQTFALKPMN 371

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
           CPGH  +F    +SYRELP+R AEFG ++RNE +G+LHGL RVR F QDD+H+FCT +Q+
Sbjct: 372 CPGHCVMFASKKRSYRELPLRYAEFGVLHRNELTGALHGLTRVRRFVQDDSHIFCTMDQI 431

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR-VGSDALWDDAENIMKGVLDTIKNSS 459
            +E   + NL+  IYK FGF K  + LSTR EK+ +G    W+ AE ++  VL+      
Sbjct: 432 ESEVTGVLNLMKKIYKIFGF-KTEIALSTRNEKKFMGEIETWNKAEAMLTQVLN------ 484

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC- 518
              +   +  G+GAFYGPK +  ++DA+GR  Q  T+Q+DF LP RF   Y++    +  
Sbjct: 485 DSHLPFVINAGDGAFYGPKIDIRIEDALGRKHQVATVQLDFQLPLRFKLDYMSEDPNQPL 544

Query: 519 -HPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKS 577
             PVM+HRAV GSIERF  I+ E+  G  P WLSP Q +V T++    EY  ++   L  
Sbjct: 545 KTPVMVHRAVLGSIERFTAILTEHLAGKWPFWLSPRQVMVCTVSEKYNEYGAKVTKELND 604

Query: 578 HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
                + D  +  +  KIR   + +   I++ G++E    S+ +R   +    KV   + 
Sbjct: 605 AGFYADLDDSDNKLPKKIRNAQVAQYNFILVIGEEELVSNSVNVRTRENKVEGKVEFKEF 664

Query: 638 IPILTK 643
           I  L +
Sbjct: 665 IKHLKQ 670


>gi|167389590|ref|XP_001739012.1| threonyl-tRNA synthetase, cytoplasmic [Entamoeba dispar SAW760]
 gi|165897485|gb|EDR24628.1| threonyl-tRNA synthetase, cytoplasmic, putative [Entamoeba dispar
           SAW760]
          Length = 676

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 212/606 (34%), Positives = 337/606 (55%), Gaps = 22/606 (3%)

Query: 43  INGKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE 101
           +NGK+ DL+ P  E S +E +  ++  +  V  HS AH++ EA+++ + +  +  GP   
Sbjct: 82  VNGKLWDLTRPFEEDSTVEYLGFDNQEAHDVFWHSSAHLLGEAMETQY-KCYLHTGPATA 140

Query: 102 DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEI 161
             F+YD       S+ +  +++  ++  +     F +  ++ E+A ++F      YKV+I
Sbjct: 141 IDFFYDCKMNGAISATDFKKLQSLIEGYVREHQVFTRIEITKEEALKMFAYN--PYKVKI 198

Query: 162 LESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIY 221
           +E +P    +T Y+ G + DLCRGPH+ +   +K   K++     +  G +   +L R++
Sbjct: 199 IEKLPEGSTITAYKNGSFVDLCRGPHLANAASIKAI-KILSSGSVHLDGTATGDLLQRVH 257

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLIS 281
             ++ T+  L +Y+   EE++KRDHR + R+ DLF       G  FW   G +I+  L+ 
Sbjct: 258 AVSFPTKDLLKEYIKRAEEADKRDHRLIGRQQDLFFFHVLSPGSCFWLPHGTRIYNKLVQ 317

Query: 282 YMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
            +R + +   Y+E+ TP +    LW+ SGHW  Y+ +MF+ +C      + +TFALKPMN
Sbjct: 318 LIRSEYRVLGYQEVITPNIFLSTLWETSGHWQHYKDDMFSFEC------EKQTFALKPMN 371

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
           CPGH  +F    +SYRELP+R AEFG ++RNE +G+LHGL RVR F QDD+H+FCT +Q+
Sbjct: 372 CPGHCVMFASKKRSYRELPLRYAEFGVLHRNELTGALHGLTRVRRFVQDDSHIFCTMDQI 431

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR-VGSDALWDDAENIMKGVLDTIKNSS 459
            +E   + NL+  IYK FGF K  + LSTR EK+ +G    W+ AE ++  VL+      
Sbjct: 432 ESEVTGVLNLMKKIYKIFGF-KTEIALSTRNEKKFMGEIETWNKAEAMLTQVLN------ 484

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC- 518
              +   +  G+GAFYGPK +  ++DA+GR  Q  T+Q+DF LP RF   Y++    +  
Sbjct: 485 DSHLPFVINPGDGAFYGPKIDIRIEDALGRKHQVATVQLDFQLPLRFKLDYMSEDPNQPL 544

Query: 519 -HPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKS 577
             PVM+HRAV GSIERF  I+ E+  G  P WLSP Q +V T++    EY  +I   L  
Sbjct: 545 KTPVMVHRAVLGSIERFTAILTEHLAGKWPFWLSPRQVMVCTVSEKYNEYGAKITKELND 604

Query: 578 HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
                + D  +  +  KIR   + +   I++ G++E    S+ +R   S    KV   + 
Sbjct: 605 AGFYADLDDSDNKLPKKIRNAQVAQYNFILVIGEEELVSNSVNVRTRKSKVEGKVEFSEF 664

Query: 638 IPILTK 643
           I  L +
Sbjct: 665 IKHLKQ 670


>gi|294941858|ref|XP_002783275.1| threonyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
 gi|239895690|gb|EER15071.1| threonyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
          Length = 908

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 223/633 (35%), Positives = 344/633 (54%), Gaps = 74/633 (11%)

Query: 47  VCDLSDPVREGS--IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGF 104
           V DLS P+ EGS  +E++  + P       HS AHI+ EA++  +    + IGP +E+GF
Sbjct: 151 VWDLSRPL-EGSCKLELLKFDSPEGKDTFWHSSAHILGEAMEQEYG-CYLTIGPPLENGF 208

Query: 105 YYD-FDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE 163
           YYD F        ++  +IEK++  I+  D  F +  ++ E+A ELF      +K++++ 
Sbjct: 209 YYDGFFGNLKLGPNDYEKIEKRIDSIVKSDQKFQRLVVTKEEALELFAYN--PFKLQLIS 266

Query: 164 S-IPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYG 222
           + +P     ++YR G   DLCRGPH+  TG  K F+ + K + AYW G +    L R+Y 
Sbjct: 267 TKVPDGSLTSVYRIGSLVDLCRGPHLPRTGIAKAFW-VNKNSQAYWLGKAENDSLQRVYA 325

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLIS 281
            ++ T++ L +Y   +EE+ KRDHR + ++ DLF      S G  FW   G  I+  L+ 
Sbjct: 326 ISFPTEKMLKEYKRNVEEAMKRDHRLIGKKQDLFFFHPTMSPGSCFWTSHGAVIYNKLVD 385

Query: 282 YMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
           ++RR+ +   ++E+ TP +  + L+QQSGH  +Y+ NM+++    +T      + LKPMN
Sbjct: 386 FIRREYRLRGFDEVITPNIFSEALFQQSGHCGNYKDNMYSMNIEGET------WFLKPMN 439

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
           CPGH  +F+  ++SY+ELP+R+A+FG ++RNE SG+L GL RVR F QDDAH+FC  +Q+
Sbjct: 440 CPGHCMIFDQKVRSYKELPIRMADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCRPDQV 499

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQ 460
            +E +     +  +Y  FGF+   V LSTRP+K +GS A+WD AE+ +K  L+       
Sbjct: 500 QDEIVHALEFLKFVYNTFGFD-FSVCLSTRPKKAIGSRAIWDTAESGLKNALEACG---- 554

Query: 461 DRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC-- 518
             I+  +  G+GAFYGPK +  L+DA+ R  QCGTIQ+DFNLP RFN  Y  + +E+   
Sbjct: 555 --IDYDLNPGDGAFYGPKIDIRLRDALNRYHQCGTIQLDFNLPIRFNLQYRIAETEESGD 612

Query: 519 ------------------------------------------------HPVMIHRAVFGS 530
                                                            PVMIHRA+ GS
Sbjct: 613 AHAASEAANSPVNDQQKGSTQSSAAVENVGSKAKADEITLGELRHGFERPVMIHRAILGS 672

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
           IER   I+ E+F G  P WLSP Q +V  ++    +YA  +   L       + D    T
Sbjct: 673 IERCTAILTEHFGGKWPFWLSPRQVMVVPVSDKYSDYADYVRKQLVRLGYEADADLSTRT 732

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRR 623
           +N K+RE  +     I + G+KE ++ ++ +R+
Sbjct: 733 MNKKVREAQVAAFNYIAVVGEKEQNDLTVTLRK 765


>gi|148675292|gb|EDL07239.1| threonyl-tRNA synthetase-like 2, isoform CRA_b [Mus musculus]
          Length = 559

 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 214/553 (38%), Positives = 315/553 (56%), Gaps = 20/553 (3%)

Query: 93  QVAIGPIIEDGFYYD-FDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFE 151
            +  GP IE+GFYYD F +++  SS EL+ +E   + II    PF +  +S +   E+F+
Sbjct: 8   HLCYGPPIENGFYYDMFIEDRVVSSTELSALENICKTIIKEKQPFERLEVSKDTLLEMFK 67

Query: 152 SKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGD 211
             K  +K  IL+        T+YR G   DLC+GPHVR TG++K   K+ K +  YW G+
Sbjct: 68  YNK--FKCRILKEKVDTPTTTVYRCGPLIDLCKGPHVRHTGKIKAI-KIFKNSSTYWEGN 124

Query: 212 SNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRK 271
                L RIYG ++   + +  +  F EE++ RDHRK+ +E +LF   +   G  F+  +
Sbjct: 125 PEMETLQRIYGISFPDSKMMKDWEKFQEEAKSRDHRKIGKEQELFFFHDLSPGSCFFLPR 184

Query: 272 GWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G  I+  L+ ++R +  K ++ E+ +P + +  LW+ SGHW  Y  NMF      DT   
Sbjct: 185 GAFIYNALMDFIREEYHKRNFTEVLSPNMYNSKLWETSGHWQHYSNNMFTFDVEKDT--- 241

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
              FALKPMNCPGH  +F H  +S+RE+PVR A+FG ++RNE SG+L GL RVR F QDD
Sbjct: 242 ---FALKPMNCPGHCLMFAHRPRSWREMPVRFADFGVLHRNELSGTLSGLTRVRRFQQDD 298

Query: 391 AHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKG 450
           AH+FC  EQ+  E     + + S+Y  FGF    + LSTRPE  +G   +WD+AE  ++ 
Sbjct: 299 AHIFCMVEQIEEEIKGCLHFLQSVYSTFGF-SFQLNLSTRPEHFLGEIEIWDEAERQLQN 357

Query: 451 VLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFY 510
            L  ++     +IN     G+GAFYGPK +  +KDAIGR  QC TIQ+DF LP RFN  Y
Sbjct: 358 SL--VEFGKPWKINP----GDGAFYGPKIDIKIKDAIGRYHQCATIQLDFQLPIRFNLTY 411

Query: 511 VNSHS-EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQ 569
           V+    +K  PV+IHRA+ GS+ER I I+ EN+ G  PLWLSP Q +V  +  +   YA 
Sbjct: 412 VSKDGDDKNRPVIIHRAILGSVERMIAILSENYGGKWPLWLSPRQVMVIPVGPACENYAL 471

Query: 570 EIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
           +++          + D  +  T+N KIR   + +   I++ G+KE    ++ +R   +  
Sbjct: 472 QVSKECFEEGFMADVDLDDSCTLNKKIRNAQLAQYNFILVVGEKEKINNAVNVRTRDNKI 531

Query: 629 TQKVSLLDAIPIL 641
             ++S+   I  L
Sbjct: 532 HGEISIASVIEKL 544


>gi|194384006|dbj|BAG59361.1| unnamed protein product [Homo sapiens]
          Length = 602

 Score =  387 bits (995), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 213/534 (39%), Positives = 309/534 (57%), Gaps = 22/534 (4%)

Query: 94  VAIGPIIEDGFYYD-FDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFES 152
           +  GP IE+GFYYD + +E   SS++ + +E   ++II     F +  +  E    +F+ 
Sbjct: 52  LCYGPPIENGFYYDMYLEEGGVSSNDFSSLEALCKKIIKEKQAFERLEVKKETLLAMFKY 111

Query: 153 KKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDS 212
            K  +K  IL         T+YR G   DLCRGPHVR TG++K   K+ K +  YW G +
Sbjct: 112 NK--FKCRILNEKVNTPTTTVYRCGPLIDLCRGPHVRHTGKIKAL-KIHKNSSTYWEGKA 168

Query: 213 NRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKG 272
           +   L RIYG ++   + L ++  F EE++ RDHRK+ R+ +L+   E   G  F+  KG
Sbjct: 169 DMETLQRIYGISFPDPKMLKEWEKFQEEAKNRDHRKIGRDQELYFFHELSPGSCFFLPKG 228

Query: 273 WKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
             I+  LI ++R +  K  ++E+ TP + +  LW  SGHW  Y  NMF+ +   +     
Sbjct: 229 AYIYNALIEFIRSEYRKRGFQEVVTPNIFNSRLWMTSGHWQHYSENMFSFEVEKEL---- 284

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
             FALKPMNCPGH  +F+H  +S+RELP+RLA+FG ++RNE SG+L GL RVR F QDDA
Sbjct: 285 --FALKPMNCPGHCLMFDHRPRSWRELPLRLADFGVLHRNELSGALTGLTRVRRFQQDDA 342

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
           H+FC  EQ+ +E     + + ++Y  FGF    + LSTRPEK +G   +WD AE  ++  
Sbjct: 343 HIFCAMEQIEDEIKGCLDFLRTVYSVFGFS-FKLNLSTRPEKFLGDIEVWDQAEKQLENS 401

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
           L+      +  +N+    G+GAFYGPK +  +KDAIGR  QC TIQ+DF LP RFN  YV
Sbjct: 402 LNEFGEKWE--LNS----GDGAFYGPKIDIQIKDAIGRYHQCATIQLDFQLPIRFNLTYV 455

Query: 512 NSH--SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQ 569
            SH   +K  PV++HRA+ GS+ER I I+ EN+ G  P WLSP Q +V  +  +  EYAQ
Sbjct: 456 -SHDGDDKKRPVIVHRAILGSVERMIAILTENYGGKWPFWLSPRQVMVVPVGPTCDEYAQ 514

Query: 570 EIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           ++           + D     T+N KIR   + +   I++ G+KE    ++ IR
Sbjct: 515 KVRQQFHDAKFMADIDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKISGTVNIR 568


>gi|219113513|ref|XP_002186340.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|209583190|gb|ACI65810.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 766

 Score =  387 bits (995), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 217/639 (33%), Positives = 354/639 (55%), Gaps = 33/639 (5%)

Query: 2   PSDIKLTFPDGSI-------KNFPV-HATGSDVAESISRSLAKKAVAVAINGKVCDLSDP 53
           P+ I++  PDG +       +NF     T  DVA  I++ LA  A     N  + D++ P
Sbjct: 116 PTPIRVVMPDGKVLEQDQEGQNFRAWQTTPWDVARVIAQGLADAATVARENQLLWDMTRP 175

Query: 54  V--REGSIEIITPEDPR-SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FD 109
           +      +E++  ED + +  V  HS AH+M EA++ ++   ++ IGP +  GFYYD + 
Sbjct: 176 LVGNVAKLELLKFEDDQDAKTVFWHSSAHMMGEALEHLYG-CKLTIGPPLAGGFYYDSYM 234

Query: 110 KEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES-IPAK 168
            +  F  ++ + +E ++ +II +   F +  ++ E+  ELF      +KV IL + +P  
Sbjct: 235 GKDAFREEDYSPVEGEVGKIIKQKQKFERLVITKEEGLELFADN--PFKVNILTTKVPDG 292

Query: 169 ENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQ 228
              T+Y+ G+  DLCRGPH+  TG+VK F    + +   W GD+N   L R+YG ++  +
Sbjct: 293 SRTTVYKCGDLIDLCRGPHLSHTGKVKAF-AATRHSATNWLGDTNNDTLQRMYGISFPDK 351

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK 288
           + L  +    E++++RDHR++A + DL    +  +G  FW   G +I+  LI +++    
Sbjct: 352 KMLKVWKENQEKAKERDHRRIAAKQDLIMFHDLSAGSAFWLPHGARIYNKLIDFIKSHYW 411

Query: 289 D-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
           +  Y+EI TP + +  LW +SGH   Y+  MF   C D    + + +A+KPMNCPGH  +
Sbjct: 412 NRGYDEIITPNIYNLDLWHKSGHALHYKDAMF---CFD---VEGQEWAMKPMNCPGHCLM 465

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
           F + ++SYR+LP+R A+FG ++RNE SG+L GL RVR F QDDAH++C ++Q+  E +  
Sbjct: 466 FANSIRSYRDLPLRFADFGVLHRNELSGALTGLTRVRRFQQDDAHIYCREDQIEKEVVDA 525

Query: 408 HNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGV 467
            N +  +Y  FG     ++LSTRP+K +G  ALW+ AE  +   +D        R+N   
Sbjct: 526 LNFMKDVYDTFGM-TYKLELSTRPQKALGDVALWERAEEALANAMDMFAGKGGWRVNP-- 582

Query: 468 LLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK----CHPVMI 523
             G+GAFYGPK +  + DA+ R  QC T+Q+DF LP RF+  Y  +  E+      PVMI
Sbjct: 583 --GDGAFYGPKIDIKVMDAMDRVHQCATVQLDFQLPIRFDLQYTTASKEEGQQFARPVMI 640

Query: 524 HRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIE 583
           HRA+ GS+ER   ++ E++ G  P WLSP Q ++  + +   +Y+++I   L +    ++
Sbjct: 641 HRAMLGSVERMFAVLCEHYGGKWPFWLSPRQVMLVPVHAEFFDYSEDIRAKLHAEGFYVD 700

Query: 584 TDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
            D    T   K+R   + +     + G  E +  S+ IR
Sbjct: 701 VDTSKNTFQKKVRNAQVAQYNFQFVVGKAEVANGSVNIR 739


>gi|294941856|ref|XP_002783274.1| threonyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
 gi|239895689|gb|EER15070.1| threonyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
          Length = 837

 Score =  387 bits (994), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 223/633 (35%), Positives = 344/633 (54%), Gaps = 74/633 (11%)

Query: 47  VCDLSDPVREGS--IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGF 104
           V DLS P+ EGS  +E++  + P       HS AHI+ EA++  +    + IGP +E+GF
Sbjct: 151 VWDLSRPL-EGSCKLELLKFDSPEGKDTFWHSSAHILGEAMEQEYG-CYLTIGPPLENGF 208

Query: 105 YYD-FDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE 163
           YYD F        ++  +IEK++  I+  D  F +  ++ E+A ELF      +K++++ 
Sbjct: 209 YYDGFFGNLKLGPNDYEKIEKRIDSIVKSDQKFQRLVVTKEEALELFAYN--PFKLQLIS 266

Query: 164 S-IPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYG 222
           + +P     ++YR G   DLCRGPH+  TG  K F+ + K + AYW G +    L R+Y 
Sbjct: 267 TKVPDGSLTSVYRIGSLVDLCRGPHLPRTGIAKAFW-VNKNSQAYWLGKAENDSLQRVYA 325

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLIS 281
            ++ T++ L +Y   +EE+ KRDHR + ++ DLF      S G  FW   G  I+  L+ 
Sbjct: 326 ISFPTEKMLKEYKRNVEEAMKRDHRLIGKKQDLFFFHPTMSPGSCFWTSHGAVIYNKLVD 385

Query: 282 YMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
           ++RR+ +   ++E+ TP +  + L+QQSGH  +Y+ NM+++    +T      + LKPMN
Sbjct: 386 FIRREYRLRGFDEVITPNIFSEALFQQSGHCGNYKDNMYSMNIEGET------WFLKPMN 439

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
           CPGH  +F+  ++SY+ELP+R+A+FG ++RNE SG+L GL RVR F QDDAH+FC  +Q+
Sbjct: 440 CPGHCMIFDQKVRSYKELPIRMADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCRPDQV 499

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQ 460
            +E +     +  +Y  FGF+   V LSTRP+K +GS A+WD AE+ +K  L+       
Sbjct: 500 QDEIVHALEFLKFVYNTFGFD-FSVCLSTRPKKAIGSRAIWDTAESGLKNALEACG---- 554

Query: 461 DRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC-- 518
             I+  +  G+GAFYGPK +  L+DA+ R  QCGTIQ+DFNLP RFN  Y  + +E+   
Sbjct: 555 --IDYDLNPGDGAFYGPKIDIRLRDALNRYHQCGTIQLDFNLPIRFNLQYRIAETEESGD 612

Query: 519 ------------------------------------------------HPVMIHRAVFGS 530
                                                            PVMIHRA+ GS
Sbjct: 613 AHAASEAANSPVNDQQKGSTQSSAAVENVGSKAKADEITLGELRHGFERPVMIHRAILGS 672

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
           IER   I+ E+F G  P WLSP Q +V  ++    +YA  +   L       + D    T
Sbjct: 673 IERCTAILTEHFGGKWPFWLSPRQVMVVPVSDKYSDYADYVRKQLVRLGYEADADLSTRT 732

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRR 623
           +N K+RE  +     I + G+KE ++ ++ +R+
Sbjct: 733 MNKKVREAQVAAFNYIAVVGEKEQNDLTVTLRK 765


>gi|301095894|ref|XP_002897046.1| threonyl-tRNA synthetase [Phytophthora infestans T30-4]
 gi|262108475|gb|EEY66527.1| threonyl-tRNA synthetase [Phytophthora infestans T30-4]
          Length = 725

 Score =  387 bits (993), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 218/602 (36%), Positives = 338/602 (56%), Gaps = 36/602 (5%)

Query: 44  NGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPII-E 101
            G++ DL  P++ G+++++        +V  HS AH++ +A++  + + +++  GP + E
Sbjct: 110 TGEILDLRAPLQPGTLQLLDFSSDEGKSVFWHSSAHVLGQALEDKYQDKIRLTDGPPLKE 169

Query: 102 DGFYYDFDKEQPFSSDE--LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKV 159
            GF+Y+   +   +  E    ++ + +++I+    PF +  ++ E A +LF      +K 
Sbjct: 170 GGFFYEMFLQDGLTVSETDFDELSRSIKKIVKARQPFERLQVTREFADKLFAYSD--FKR 227

Query: 160 EILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSR 219
           ++L  IP  E ++LYR G   DLCRGPHV  TG +  F ++ +   ++W G   + +L R
Sbjct: 228 DMLHKIPEGEAISLYRCGPLIDLCRGPHVPHTGMLSSF-EITRCGASHWEG---KELLQR 283

Query: 220 IYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTL 279
           +Y  ++    +L ++ +  EE++KRDHR + R   LF       G  F+   G ++F TL
Sbjct: 284 VYAISFPNNTQLKEWRHLQEEAKKRDHRLIGRAQQLFMFHPLSPGSSFFLPHGTRVFNTL 343

Query: 280 ISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK---CADDTIKD----- 330
             ++RR+ +   Y+E+ TP +  + LW+ SGH  +Y  +MF V      DD  ++     
Sbjct: 344 ADFIRREYRRRGYDEVITPLIFKKELWETSGHLQNYHDDMFMVSQGIATDDACEEHGHTH 403

Query: 331 ------LRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPSGSLHGLMRV 383
                    F LKPMNCPGH  +F    K SYRELPVRLA+F +++RNE SG+L GL RV
Sbjct: 404 SHGEEEYDQFGLKPMNCPGHCLLFREAKKYSYRELPVRLADFSALHRNEASGALTGLTRV 463

Query: 384 RGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDD 443
           R F QDDAH+FCT  Q+ +E     + I  +Y  F F K  ++LSTRPEK +G   LWDD
Sbjct: 464 RRFHQDDAHIFCTAAQVQSEMSLALDFIKHVYGIFDF-KFNLRLSTRPEKYMGDLELWDD 522

Query: 444 AENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLP 503
           AE+ ++  LD             V  G+GAFYGPK + ++ DA+ R  QCGTIQ+DF LP
Sbjct: 523 AEDQLRLALDDFGQPWT------VNEGDGAFYGPKIDIVVTDALQRQHQCGTIQLDFQLP 576

Query: 504 SRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSS 563
             F   Y  +  E   P++IHRAV GSIER + I+IE+  G  PLWLSP Q  V  I  +
Sbjct: 577 INFELEYDGADGEAHTPIIIHRAVLGSIERMMAILIEHTGGKWPLWLSPRQVAVLPIAEA 636

Query: 564 AVEYAQEIANLLK---SHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
             EYA E+A+ L+   +  L ++    ++T+N +IRE  +     I++ GDKE +   + 
Sbjct: 637 HREYAYEVASTLQNATARGLYVDVQDGSKTLNKRIREAQVAGYNYILVVGDKEQASGEVN 696

Query: 621 IR 622
           IR
Sbjct: 697 IR 698


>gi|123449736|ref|XP_001313584.1| threonyl-tRNA synthetase family protein [Trichomonas vaginalis G3]
 gi|121895473|gb|EAY00655.1| threonyl-tRNA synthetase family protein [Trichomonas vaginalis G3]
          Length = 709

 Score =  386 bits (991), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 222/621 (35%), Positives = 347/621 (55%), Gaps = 38/621 (6%)

Query: 40  AVAIN-GKVCDLSDPVREG-SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIG 97
           A AIN  ++ DLS P+  G +I  +  +DPR   V  HS AH++  A+++   +V++AIG
Sbjct: 84  AAAINLEEMWDLSRPITHGDNITFVNFDDPRGKEVFWHSSAHVLGAAIETHL-QVEIAIG 142

Query: 98  PIIEDGFYYDFDKE--QPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKE 155
           P  E GF+YD++    Q  + + L +IEK    I      + ++  + E+A E+F S   
Sbjct: 143 PAGEKGFFYDYEPREGQEVTPETLKEIEKAAISICNHKVDYERKMCTREEALEIFSSNH- 201

Query: 156 AYKVEILES-IPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNR 214
            YK EIL + +   E V+LYR G + DLCRGPH+ +   +  ++ +M V+   W GD+N+
Sbjct: 202 -YKTEILTNRVAPGELVSLYRTGTFIDLCRGPHLINAAPIASWW-VMDVSACIWNGDANK 259

Query: 215 PMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWK 274
            M  RI    +  ++++T++  FLEE+ KRDHRKL  ++ LF   E   G  F++ +G  
Sbjct: 260 KM-RRIRAITFPKKEQMTEHKKFLEEAAKRDHRKLGTDLGLFFFHEWSPGCAFFYPEGCL 318

Query: 275 IFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD-------- 325
           +++ L+S +R++ +K  + E+ TP +    L++ SGHW  YR +MF  K  D        
Sbjct: 319 MYRRLMSMIRQQYLKRQFVEVITPNIFYDDLFKTSGHWAHYRDDMFHFKVDDGAPTEEEL 378

Query: 326 ------DTI--KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
                 D +  K +R   +KPMNCPGH  VF   ++SY+E+P+R+AEFG ++RNE +G+L
Sbjct: 379 AAQDAKDPVAQKAVREMGMKPMNCPGHCLVFRSKVRSYKEMPIRMAEFGVLHRNEATGAL 438

Query: 378 HGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGS 437
            GL RVR F QDDAH+F   +Q+  E     + +  +Y  FG E      +   EK +G 
Sbjct: 439 TGLTRVRRFVQDDAHIFARYDQIGEEISDGLDFMTEVYGYFGMELEFTLSTINMEKYMGD 498

Query: 438 DALWDDAENIMK-GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
             +W++A N+++  ++D  KN ++         GE AFYGPK + ++KD +GR  Q  TI
Sbjct: 499 LKVWENATNMLRQALIDNKKNFTE-------APGEAAFYGPKIDVLVKDCLGRRHQLATI 551

Query: 497 QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI 556
           Q+DF LP +F+  YV++  +   PVMIHRAV GS+ERFI I IE+F G  P W+SP Q  
Sbjct: 552 QLDFQLPEKFDLTYVDAELKPQRPVMIHRAVLGSLERFIAIAIEHFAGKFPFWMSPRQIC 611

Query: 557 V---TTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
           +          ++Y +EI +++     ++E     E++N KI         + +I GD+E
Sbjct: 612 IIPQNMTKEGQMKYIKEIYDMMHLEGFAVEIADGPESMNKKIVNAFKMSNNVALIIGDRE 671

Query: 614 ASERSIGIRRFGSTTTQKVSL 634
              RS+  R  G      V L
Sbjct: 672 VESRSVAARWRGENAPTVVPL 692


>gi|323450323|gb|EGB06205.1| hypothetical protein AURANDRAFT_29703 [Aureococcus anophagefferens]
          Length = 750

 Score =  385 bits (990), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 223/651 (34%), Positives = 355/651 (54%), Gaps = 34/651 (5%)

Query: 5   IKLTFPDGSIKNFPVHATGS-DVAESISRSLAKKAVAVAINGKVC-----DLSDPVREGS 58
           I++T PDG++K    H T   D+A  IS+ LA + V VA  G V      DL  P+ EG 
Sbjct: 85  IEITLPDGTVKPGVAHETSPLDIALGISKQLAGR-VCVARAGDVVKPVLWDLPRPL-EGD 142

Query: 59  --IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFS 115
             +E++  E P    V  HS AH++  A++  +   +++IGP +E GFYYD +   +  S
Sbjct: 143 CRLELLDFESPEGKMVFWHSAAHLLGAALEQKY-GAKLSIGPPVEGGFYYDAYIGNETIS 201

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES-IPAKENVTLY 174
             E   I+ ++ +I+   + F +  L+  +  ++F      +K  I+++ +P     T Y
Sbjct: 202 DKEFKDIQARVAKIVNAKAKFERLALTKAELLDMFAYNP--FKSAIIQNKVPDGAMTTAY 259

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
           R G   DLC GP V   G+VK F ++++ + AYW G +    L R+YG A+  ++ LT++
Sbjct: 260 RSGPIIDLCMGPQVPDAGRVKAF-EVLRASSAYWLGKTENDTLQRVYGVAFPDKKGLTKH 318

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEE 293
              L E+ KRDHRK+     LF   +   G  F+   G +I+  LI++++ +    +Y E
Sbjct: 319 KAMLAEAAKRDHRKVGGAQKLFFFDQLSPGSAFFEPHGARIYNGLIAFIKDQYWLREYTE 378

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           + TP V +  LW  SGH   Y+ +MF   C D    +   F +KPMNCPGH  +F H ++
Sbjct: 379 VVTPNVYNFDLWHTSGHALHYKDDMF---CFD---VEGAEFGMKPMNCPGHCLMFKHDVR 432

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           S+R+LP+R A+FG ++RNE SG+L GL RVR F QDD H+FC ++Q+  E       +  
Sbjct: 433 SWRDLPMRYADFGVLHRNELSGALSGLTRVRRFQQDDGHIFCREDQVEEEVRGALEFMKH 492

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           +Y  FG     ++LSTRP+K +G  A+WD AE  +   +D        R+N     G+GA
Sbjct: 493 VYDVFGM-GYRLELSTRPKKALGDKAVWDRAEAALASAMDAFAGKGGWRVNP----GDGA 547

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFY-VNSHSEK-----CHPVMIHRAV 527
           FYGPK +  + DA+ R  QC TIQ+DF LP RF+  Y V   S +       P++IHRA+
Sbjct: 548 FYGPKIDIKVTDALERVHQCATIQLDFQLPIRFDLKYRVGDTSGEEGGAVTRPIIIHRAM 607

Query: 528 FGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR 587
            GS+ER + ++ E++ G  P W+SP Q  V  +  +  +YA+ +   +++    ++ D  
Sbjct: 608 LGSVERMMAVLTEHWGGKWPFWISPRQVCVIPVGPTNFDYARAVRKTIRAARFFVDVDDS 667

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
             T+  K+R   + +   I++ GD E S+ ++ +R   +T    V L D +
Sbjct: 668 GNTLPKKVRNAQLAQYNFILVVGDNEVSDGTVTVRTRANTVEGTVPLADFV 718


>gi|193216931|ref|YP_002000173.1| threonyl-tRNA synthetase [Mycoplasma arthritidis 158L3-1]
 gi|193002254|gb|ACF07469.1| threonyl-tRNA synthetase [Mycoplasma arthritidis 158L3-1]
          Length = 579

 Score =  385 bits (989), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 207/572 (36%), Positives = 322/572 (56%), Gaps = 32/572 (5%)

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIAR 132
           + HS +H++A A+  ++P  ++AIGP I++GFYYDF+ E+P    +L +IEK+M ++  +
Sbjct: 7   LNHSTSHLLAAAILKLYPNTKLAIGPAIDEGFYYDFEFEKPLLESDLPKIEKQMHKLAEQ 66

Query: 133 DSPFLKQYLSHEKARELFESKKEAYKVEILESIPA-KENVTLY-------RQGEWFDLCR 184
                  Y+  +   + +    + YK E+ E +   K+ +T Y       ++  + DLC 
Sbjct: 67  G------YVMEKVDVQNYNFDNQPYKKEMFEELKKDKKEITFYAYIHPKTKENLFVDLCV 120

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           G HV ST ++K F KL+ +AGAYWRGDS   ML+RIYGT W +Q+EL +YL  +EE ++R
Sbjct: 121 GNHVESTKEIKHF-KLLSLAGAYWRGDSKNKMLTRIYGTCWESQKELEEYLALVEERKER 179

Query: 245 DHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQVLDQ 302
           DHRK+ +++++F +++  G G   W   G KI   +  Y ++   K  ++E+ TP   ++
Sbjct: 180 DHRKIGKDLNIFAVSQLSGQGFPIWLEDGMKIHNAIRDYVLKLDRKFGFKEVLTPHFGEK 239

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            L++ SGHWD Y+ +MF     D+      T   +PM CP H+ ++N   +SYR+LP+R 
Sbjct: 240 KLYEISGHWDHYQEDMFTPIKMDN-----ETLVARPMTCPHHIVLYNMTRRSYRDLPIRY 294

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           +E   +YR E SG+L GL RVR     + HVF  K+Q+  E   ++N+I     DF  + 
Sbjct: 295 SEQSRLYRYEKSGALSGLERVRSMDLTEGHVFVRKDQIKAEFKHLYNMIQKALSDFDIQV 354

Query: 423 IMVKLSTR-PEKRV---GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
             V LS R P   V     D +W+ AE  +K VL  +K      I     +GE AFYGPK
Sbjct: 355 DHVSLSLRDPNNSVKFFNDDKMWNQAEADLKEVLKELK------IEYKEFIGEAAFYGPK 408

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++ +K  + +     T+Q+DF LP+RF   YV+   E   PV+IHR + G+ ERFI I+
Sbjct: 409 IDFQVKTVLNKIITMSTLQLDFLLPARFEMKYVDDKEEFQTPVLIHRGLIGTYERFIAIL 468

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           +E  KG LP WLSP Q  +  I     +Y Q++        ++   D R+E IN KIRE 
Sbjct: 469 LEQTKGVLPYWLSPRQVTILPIVDEVNDYCQKLYEEFIDLGINANVDLRSERINKKIREA 528

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
            + K   II+ G  E +  ++ +R +GS  T+
Sbjct: 529 QLLKTKFIIVIGKNEIANNTLAVRAYGSEETK 560


>gi|301061986|ref|ZP_07202704.1| threonine--tRNA ligase [delta proteobacterium NaphS2]
 gi|300443910|gb|EFK07957.1| threonine--tRNA ligase [delta proteobacterium NaphS2]
          Length = 483

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 206/498 (41%), Positives = 309/498 (62%), Gaps = 31/498 (6%)

Query: 14  IKNFPVHATGSDV----AESISRSLA---------KKAVAVAINGKVCDLSDPVREGS-I 59
           +  F V   G D     AE++S + A          + VAV ING   DLS  + + + +
Sbjct: 1   MSTFSVGIKGKDFHQVEAETLSAAEALAHLKVGGLDRVVAVKINGVPGDLSAGLGDKTEL 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           E I       L ++RHS +H+MA AV+ ++P V+V IGP I+DGFYYDFD ++PF  D+L
Sbjct: 61  EPIYLHSDEGLEILRHSTSHVMAMAVRELFPGVKVTIGPAIKDGFYYDFDYKRPFKEDDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             +E+KM EII  D PF ++  +  +A   F+++ E YKVE++E + A E V+LY QG +
Sbjct: 121 PLVEEKMHEIIEADLPFTRKETAVSEALAFFKAQGEDYKVELIEDLDA-EMVSLYTQGSF 179

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPH+ STG +K  F L+K AGAYWRGD +RPMLSRIYG  ++ +++L ++L+ LE
Sbjct: 180 TDLCRGPHIPSTGMIKA-FHLIKTAGAYWRGDEHRPMLSRIYGVGFSDRKQLKKHLHMLE 238

Query: 240 ESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTP 297
           E+ KR+H KL  +++LF   E+ G+G++ WH  G  +   L  + +   +K  Y     P
Sbjct: 239 EARKRNHVKLGAQLELFSTYEEVGAGMVVWHPNGAMLRHLLEEFEIAEHLKRGYALARGP 298

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           +VL   LW++SGH+ +YR NM+  +       D +++ +KPMNC  H+ ++   ++SYR+
Sbjct: 299 EVLKTDLWKKSGHFANYRENMYFTEI------DGQSYGMKPMNCLSHMLIYGSKIRSYRD 352

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP R  E G+V+R+E SG LHGL RVR FTQDDAH+ CT  Q+ +E   + + +  +   
Sbjct: 353 LPRRYFELGTVHRHERSGVLHGLFRVREFTQDDAHILCTPGQLNDEIKGVLDFVREVMGI 412

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           F F+   +++STRPEK +GSD  W+ A   ++  +D ++   +  IN     G+GAFYGP
Sbjct: 413 FQFD-YELEISTRPEKSIGSDEDWELATQALEKAMDELQLDYE--INE----GDGAFYGP 465

Query: 478 KFEYILKDAIGRDWQCGT 495
           K +  L+DA+GR WQC T
Sbjct: 466 KIDVKLEDALGRKWQCAT 483


>gi|269114879|ref|YP_003302642.1| threonyl-tRNA synthetase (threonine-tRNAligase, thrRS) [Mycoplasma
           hominis]
 gi|268322504|emb|CAX37239.1| Threonyl-tRNA synthetase (Threonine-tRNAligase, ThrRS) [Mycoplasma
           hominis ATCC 23114]
          Length = 579

 Score =  384 bits (986), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 209/574 (36%), Positives = 317/574 (55%), Gaps = 30/574 (5%)

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIAR 132
           + HS +H++A A+  ++P  ++AIGP IE+GFYYDF+ E P    +L  IEK M+E+   
Sbjct: 7   LNHSASHLLAAAILKLYPNAKLAIGPAIEEGFYYDFEFENPILESDLPNIEKVMKELAKE 66

Query: 133 DSPFLK------QYLSHEKARELFES-KKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
                K       + +    +EL+E  KKE  ++   +    K    L+      DLC G
Sbjct: 67  GYEMRKVGIEQYSFENQPYKKELYEEFKKEGKEITFFQYWNPKTKEILFT-----DLCAG 121

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
            H+ ++ ++K +FKL+ +AGAYWRGDS   ML+RIYGT W T+ EL +YL  L E ++RD
Sbjct: 122 GHIENSREIK-YFKLLGIAGAYWRGDSKNKMLTRIYGTCWETKDELAKYLDILRERKERD 180

Query: 246 HRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQVLDQH 303
           HRK+ R+++LF   +  G G  FW   G KI   +  Y ++   K  + E+ TP   ++ 
Sbjct: 181 HRKIGRDLNLFTFNQLGGQGFPFWLEDGMKIHNAIRDYVLKLDKKFGFREVLTPHFGEKK 240

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           L++ SGHW  Y+  MFA    D+      T   +PM CP H+ +FN   +SY++LP+R +
Sbjct: 241 LYEISGHWAHYQDTMFAPIKMDN-----ETLVARPMTCPHHIILFNSTRRSYKDLPIRYS 295

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           E   +YR E SG+L GL RVRG    + H+F   +Q+ +E   ++ +I+   KDF  E  
Sbjct: 296 EQSRLYRYEASGALSGLERVRGMDLTEGHIFVRPDQIRSEFKHLYKMILQALKDFNIEID 355

Query: 424 MVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
            + LS R     +K   +D +W+ AEN ++ VL  +       I     +GE AFYGPK 
Sbjct: 356 HISLSLRDPQDTQKFFQNDEMWNKAENDLREVLGELN------IKYKEFIGEAAFYGPKV 409

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           ++ +K A+ R     T+Q+DF LPSRF   +V+S+ +   PV+IHR + G+ ERFI  ++
Sbjct: 410 DFQVKTALNRIITMSTLQLDFLLPSRFEMKFVDSNEQFVTPVLIHRGLIGTYERFIATLL 469

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E  KG LP WLSP Q  +  I     E AQ++ N       ++  D R E IN KIR+  
Sbjct: 470 EQTKGVLPFWLSPRQITIIPINDELNEKAQDLYNEFLDEDFNVNIDIRPERINKKIRDAQ 529

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
           I K   I++ G KE    ++ +R +G   ++  S
Sbjct: 530 ILKTKFIVVIGKKEIETNTLSVREYGKDDSKTYS 563


>gi|261880448|ref|ZP_06006875.1| threonine-tRNA ligase [Prevotella bergensis DSM 17361]
 gi|270332871|gb|EFA43657.1| threonine-tRNA ligase [Prevotella bergensis DSM 17361]
          Length = 521

 Score =  384 bits (986), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 202/520 (38%), Positives = 315/520 (60%), Gaps = 18/520 (3%)

Query: 132 RDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRST 191
           +D P +++ +    A + F +  + YKVE ++       ++ Y QG + DLCRGPH+ ST
Sbjct: 3   KDEPVVRREVGKADAMKEFNADGQTYKVEHIDQDLKDGTISTYTQGNFTDLCRGPHLVST 62

Query: 192 GQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAR 251
           G +K   K+  VAGA+WRGD+NR  ++RIYG  +  ++ L +YL  LEE++KRDHRK+ +
Sbjct: 63  GSIKAI-KITSVAGAFWRGDANREQMTRIYGITFPKKKMLDEYLLMLEEAKKRDHRKIGK 121

Query: 252 EMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSG 309
           EM+LF  +E  G G+  W  KG ++   L   +R+ +K  +Y+E+  P +  ++L+  SG
Sbjct: 122 EMELFMFSERVGKGLPIWLPKGTQLRLRLQELLRKLLKPYNYQEVIAPGIGSKNLYVTSG 181

Query: 310 HWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVY 369
           H+  Y  + F       T ++   + LKPMNCP H  ++    +SY++LP+R+AEFG+V 
Sbjct: 182 HYAHYGKDAFQ---PIRTPEEDEEYMLKPMNCPHHCEIYARKPRSYKDLPLRIAEFGTVM 238

Query: 370 RNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
           R E SG LHGL RVR FTQDDAH+F   EQ+  E   + ++I  ++  FGF+    ++S 
Sbjct: 239 RYEKSGELHGLTRVRSFTQDDAHIFVRPEQVKAEFENVIDIIQKVFAIFGFDNYEAQISL 298

Query: 430 R----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDR-INTGVLLGEGAFYGPKFEYILK 484
           R     +K +GSD +W++++N        I+ + Q++ +     +GE AFYGPK ++++K
Sbjct: 299 RDPKDTDKYIGSDEIWEESQN-------AIREACQEKGMKAREEIGEAAFYGPKLDFMVK 351

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           DAIGR WQ GTIQVD+NLP RF   Y    + K  PVMIHRA FGS+ERF  ++IE+  G
Sbjct: 352 DAIGRRWQLGTIQVDYNLPERFKLEYTAEDNSKQVPVMIHRAPFGSLERFTAVLIEHTAG 411

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
           + PLWL+P Q  +  I+    +YA E+     ++ +    D RNE I  KIR++ +K++P
Sbjct: 412 HFPLWLTPDQVAILPISEKFNDYALEVKKHFDANDVRAYIDDRNEKIGRKIRDNELKRVP 471

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            ++I G+KEA+E  + +R+ G      + + D I  +  E
Sbjct: 472 YMVIVGEKEANEGLVSMRKQGGGEQASMKITDFIQRIKDE 511


>gi|167422088|ref|ZP_02313841.1| threonyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|166958900|gb|EDR55921.1| threonyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
          Length = 369

 Score =  383 bits (983), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 172/348 (49%), Positives = 245/348 (70%), Gaps = 13/348 (3%)

Query: 276 FQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           F+ L +++R K+K+  Y+E+  P ++D+ LW+++GHW++Y  +MF       T  + R +
Sbjct: 1   FRELETFVRMKLKEYQYQEVKGPFMMDRVLWEKTGHWENYAEHMFT------TSSENREY 54

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
            +KPMNCPGHV +FN GLKSYR+LP+R+AEFGS +RNEPSG+LHGLMRVRGFTQDDAHVF
Sbjct: 55  CIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHVF 114

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDT 454
           CT+EQ+ +E      ++  +Y  FGFEKI+VKLSTRPEKR+GSD LW  AE+ +   L  
Sbjct: 115 CTEEQVRDEVNSCIKMVYDMYSTFGFEKIVVKLSTRPEKRIGSDELWTRAEDDLAAAL-- 172

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH 514
               +++ I      GEGAFYGPK E+ L D + R WQCGT+Q+DF+LP R +A Y+  +
Sbjct: 173 ----TENGIPFDYQPGEGAFYGPKIEFTLHDCLDRAWQCGTVQLDFSLPGRLSASYIGEN 228

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANL 574
           +++  PVMIHRA+ GS+ERFIGI+ E + G  P WL+P+Q +V  IT S  +Y Q++   
Sbjct: 229 NDRQVPVMIHRAILGSMERFIGILTEEYAGFFPTWLAPVQVVVMNITDSQSDYVQQVTKK 288

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           L+   +  + D RNE I +KIREH+++++P +++CGDKE     I +R
Sbjct: 289 LQDAGIRAKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKIAVR 336


>gi|16081463|ref|NP_393810.1| threonyl-tRNA synthetase [Thermoplasma acidophilum DSM 1728]
 gi|22654139|sp|Q9HL99|SYT_THEAC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|10639503|emb|CAC11475.1| threonine--tRNA ligase related protein [Thermoplasma acidophilum]
          Length = 660

 Score =  382 bits (982), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 239/650 (36%), Positives = 358/650 (55%), Gaps = 61/650 (9%)

Query: 36  KKAVAVAINGKVCDLSDPVREGSIEII--TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQ 93
           K  VAV I+  + DL D V E  ++ I  +      L ++RHS AH++A AV +++P+  
Sbjct: 21  KNVVAVKIDSVLHDLRD-VAERDVDAIPVSVYSDDGLYILRHSAAHLLANAVTNLYPDAL 79

Query: 94  VAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESK 153
              GP++E+GFYYDFD  +P   ++LA+IE +M+ I   + P   + + ++KA  L    
Sbjct: 80  PNTGPVVENGFYYDFDM-KPIGEEDLAKIEDEMRRIQKENVPI--ERIVYQKADLLRIFA 136

Query: 154 KEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSN 213
           K  YK+ I+E     +  ++YRQG + DLC GPHV STG +K F KL+ +A A ++ D +
Sbjct: 137 KNPYKIRIIED-NVSDASSVYRQGNFVDLCLGPHVPSTGYIKAF-KLLNIASAVYKHDES 194

Query: 214 RPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDL-FHIAEDGSGVIFWHRKG 272
           +  L RIYGTA+  ++ L QYL  LEE+++RDHR++  EMDL    +E   G   + + G
Sbjct: 195 K-TLVRIYGTAFPDEKLLKQYLNNLEEAKRRDHRRIIAEMDLAVFNSEWAPGFPLYTQYG 253

Query: 273 WKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
             I + L+SYM     K+ + ++ TP V    +W+QSGH+  YR NM+       T+ D 
Sbjct: 254 QTIRKELLSYMDSMNRKNGWFDVWTPHVFRDTIWKQSGHYAKYRPNMYLF-----TLPDG 308

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
            ++ +KPMNCPGH+A+F+    SYR+LPVR +E G+VYR E SG + GL R R FTQDD 
Sbjct: 309 DSYGIKPMNCPGHIAIFSRRKYSYRDLPVRYSEPGTVYRYEKSGEVGGLTRPRAFTQDDG 368

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKD-FGFEKIMVKLST--------------------R 430
           H F   +Q+ +E   +  ++  ++   FG  ++   LS                     R
Sbjct: 369 HAFLRMDQIGDEIRTLLTMVKDVFTILFGNIELSFDLSVIDRDHPENYLVSYVCRNCGYR 428

Query: 431 PEKRVGSD---------------ALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
            E   G+D               ++WD+A   ++  L ++       I      GE AFY
Sbjct: 429 IEGARGTDIECPVCHSHDLEPDLSVWDNATEQLRDALKSMG------IEYKEYPGEAAFY 482

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +KDAIGR WQ  TIQ+DF +P  F   Y NS  ++   VMIHRA++GS ER +
Sbjct: 483 GPKIDVHVKDAIGRMWQLSTIQLDFFMPVNFGLTYTNSEGKEDRVVMIHRAIYGSYERVM 542

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            I++E++ G LP WL+PIQ  V  I+S+  EYA+ +   L  H +  E D   ET++ KI
Sbjct: 543 AILLEHYAGKLPTWLTPIQTYVVPISSNFDEYARHVHEELIRHGIRSEIDTSQETVSKKI 602

Query: 596 REHSIKKIPIIIICGDKEASERSIGIR-RFGSTTTQKVSLLDAIPILTKE 644
           +     +   II+ G KE    S+  R R G + T   SL + I ++ KE
Sbjct: 603 KLIHPYRPAYIIVVGSKEMETNSVTARNREGKSKT--YSLSEFIDVVKKE 650


>gi|291533300|emb|CBL06413.1| threonyl-tRNA synthetase [Megamonas hypermegale ART12/1]
          Length = 423

 Score =  380 bits (977), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 189/409 (46%), Positives = 260/409 (63%), Gaps = 14/409 (3%)

Query: 216 MLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKI 275
           ML R+YGTA+  Q +L  YL  LEE+ KRDHRKL +E+DLF + E+G G  F+H  G  I
Sbjct: 1   MLQRVYGTAFEKQADLDAYLKMLEEAAKRDHRKLGKELDLFSLHEEGPGFPFFHPNGMVI 60

Query: 276 FQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
              LI+Y R   +   Y+EI TP ++++ LW+ SGHWD Y+ NM+  K       D   +
Sbjct: 61  RNELINYWREVHRQFGYQEIKTPMIMNRKLWETSGHWDHYKENMYFTKI------DGEDY 114

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           A+KPMNCPG + V+     SYR+LP+RL E G V+R+E SG+LHGLMRVR FTQDDAH+F
Sbjct: 115 AIKPMNCPGGMLVYLTQQHSYRDLPLRLGELGLVHRHELSGALHGLMRVRNFTQDDAHIF 174

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDT 454
               Q+ +E  ++ +L   +Y  FG      +LSTRPE  +GSD +W+ A N ++  L+ 
Sbjct: 175 MLPNQIEDEIQRVIDLFDKVYSTFGL-TYHAELSTRPEDSMGSDEVWETATNALRNALE- 232

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH 514
                +  IN G    +GAFYGPK ++ L D+IGR WQCGTIQ+D  +P +F+  Y+   
Sbjct: 233 -HRGLKYVINEG----DGAFYGPKIDFHLTDSIGRTWQCGTIQLDMLMPEKFDLTYIGED 287

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANL 574
            +K  PVMIHR V+GSIERFIGI+IEN+ G  P WL+P+Q  +  I+   V+YA EI   
Sbjct: 288 GQKHRPVMIHRVVYGSIERFIGILIENYAGAFPAWLAPVQVKILPISDKYVDYAYEIKRK 347

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRR 623
           +    + +E D RNE I YKIRE  +KK+P  II G+ E   ++I +R+
Sbjct: 348 MFDLGIRVEVDDRNEKIGYKIREAQVKKVPYSIIVGESELENKNISVRK 396


>gi|323142407|ref|ZP_08077233.1| threonine--tRNA ligase [Phascolarctobacterium sp. YIT 12067]
 gi|322413100|gb|EFY03993.1| threonine--tRNA ligase [Phascolarctobacterium sp. YIT 12067]
          Length = 597

 Score =  380 bits (977), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 206/559 (36%), Positives = 315/559 (56%), Gaps = 21/559 (3%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDS 134
           H+C+H++A+A++ + P+V++AIGP I++GFYYDFD   PF+ ++LA +E +M++I     
Sbjct: 20  HTCSHVLAQAMKRLHPDVKLAIGPSIDNGFYYDFDTPAPFTPEDLAALEGEMRKICKEKL 79

Query: 135 PFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQV 194
              +  L   +A +  E K+E YKVE++  +P    ++ Y+QG++ DLC GPH+ STG++
Sbjct: 80  KLERFELPRAEAVKFMEEKEEPYKVELINDLPEDAVISFYKQGDFTDLCAGPHLDSTGRI 139

Query: 195 K-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREM 253
           K    KL    GAYWRGDSNR ML RIYG A+  ++EL  YL    E+ KRDH KL R++
Sbjct: 140 KGNAIKLTSATGAYWRGDSNRKMLQRIYGIAFPKKEELDAYLEQQAEALKRDHNKLGRDL 199

Query: 254 DLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHW 311
           + F   +  G G+     KG ++ Q L  ++   + K  Y    TP +  + L++ SGHW
Sbjct: 200 EYFTTVDYIGQGLPILLPKGARVIQLLQRWVEDVEQKRGYLLTKTPLMAKRDLYRISGHW 259

Query: 312 DSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRN 371
           D Y   MF +    D  K+   FAL+PM CP    VF +  +SYRELP+RL E  +++RN
Sbjct: 260 DHYLDGMFILGDPHDETKE--CFALRPMTCPFQYQVFLNRQRSYRELPMRLGETSTLFRN 317

Query: 372 EPSGSLHGLMRVRGFTQDDAHVFCTKEQM---FNECLKIHNLIISIYKDFGFEKIMVKLS 428
           E SG +HGL+RVR FT  + H+    +Q+   F  CL +    +        +K   + S
Sbjct: 318 EDSGEMHGLIRVRQFTISEGHLILRPDQLEEEFKGCLDLAKYCLETVG--MLDKCTFRFS 375

Query: 429 ----TRPEKRV-GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
                 P  +  G+   WD A+  MK +LD +       +N  V   E AFYGPK +   
Sbjct: 376 QWNPANPNNKYEGTAEQWDHAQAAMKKILDDLG------VNYEVGFDEAAFYGPKLDIQF 429

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            +  G++    TIQ+D  L  +F  +YV+ + EK  P +IHR   G  ER +  +IE + 
Sbjct: 430 HNVFGKEDTIVTIQIDMLLAEKFGMYYVDENGEKKLPYIIHRTSLGCYERTLAYLIETYA 489

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G LP W++P Q     +T  AV+Y  E+A+ L+++      D RNE I  KIRE  ++KI
Sbjct: 490 GALPTWMAPEQVRFLPVTDRAVDYCYELAHKLEANGYRATVDARNEKIGKKIREGQLEKI 549

Query: 604 PIIIICGDKEASERSIGIR 622
           P +++ GD++    ++  R
Sbjct: 550 PYMLVVGDRDMENNTVSPR 568


>gi|317057674|ref|YP_004106141.1| threonyl-tRNA synthetase [Ruminococcus albus 7]
 gi|315449943|gb|ADU23507.1| threonyl-tRNA synthetase [Ruminococcus albus 7]
          Length = 648

 Score =  380 bits (975), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 214/650 (32%), Positives = 353/650 (54%), Gaps = 19/650 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           IKLT  DGS++        S++ + I   L K A  V ING++ DL   +  +   E++T
Sbjct: 2   IKLTLKDGSVREIESAMPASEIIKGIGMGLYKAACVVKINGEIKDLRTVIDSDCEFEVLT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +  +      H+ +H++A+AV++++P+ ++  GP  E+GFYYDF  E+PF+  +L +I+
Sbjct: 62  FDSKQGKETFWHTASHLLAQAVKNLYPDAKLGRGPATENGFYYDFKVEKPFAPADLEKIQ 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-ENVTLYRQGEWFDL 182
            +M+++        +  LS ++A +L E K E +KVE+++   +K E ++ Y+QG++ DL
Sbjct: 122 AEMKKLAKEGFELERFELSRDEAVKLMEEKGENFKVELIDKHDSKGEKLSFYKQGDFVDL 181

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPH+ S   +K   KL +  GAYW    +   +SRIYGTA+     L ++L  +EE++
Sbjct: 182 CAGPHIMSVAPIKAI-KLTQCTGAYWGKAEDGIQMSRIYGTAYPKASMLEEHLKQMEEAK 240

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVL 300
            RDH KL RE++ F   +  G G+     KG K+ QTL  ++   + K  Y+   TP + 
Sbjct: 241 LRDHNKLGRELEYFTTVDYIGQGLPILLPKGAKVIQTLQRWIEDEEYKRGYQLTKTPFMS 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            + L++ SGHWD YR  MF +   DD  K+   FAL+PM CP    VF +  +SYR+LP+
Sbjct: 301 KRELYKISGHWDHYRDGMFILGDPDDETKE--CFALRPMTCPFQYQVFLNRKRSYRDLPM 358

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM---FNECLKIHNL---IISI 414
           RL E  +++RNE SG +HGL+RVR FT  + H+    EQ+   F  CL +       I +
Sbjct: 359 RLGETSTLFRNEDSGEMHGLIRVRQFTISEGHLILRPEQLEEEFKGCLDLAKYCLETIGL 418

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            +D  +       +    K  G+   W++A+  MK +LD I       ++  + + E AF
Sbjct: 419 AEDVSYRFSQWDPANPNNKYEGTAEQWEEAQGAMKKILDDIG------LDYEIGIDEAAF 472

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K+  G++    TIQ+D  +  +F   YV+   +   P +IHR   G  ER 
Sbjct: 473 YGPKLDIQIKNVFGKEDTLITIQIDMQIAKKFGMEYVDKDGKMKMPYIIHRTSVGCYERT 532

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
           + ++IE + G LPLWL+P Q  +  I     +YA ++A  ++   + +E D  ++ I  K
Sbjct: 533 LALLIEKYAGVLPLWLAPEQVRILPIKPEHNDYAYDLAEEMRDLGMRVEVDAEDDNIGPK 592

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           I++    ++P + I GD E  + ++ +R         +   DAI  L +E
Sbjct: 593 IKQARFDRVPYMFIIGDNEVKDGTVTVRSRKEGELPAMPAADAIAKLKEE 642


>gi|302404307|ref|XP_002999991.1| threonyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
 gi|261361173|gb|EEY23601.1| threonyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
          Length = 790

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 223/673 (33%), Positives = 350/673 (52%), Gaps = 59/673 (8%)

Query: 5   IKLTFPDGSIK-NFPVHATGSDVAESISRSLAKKAVAVAIN---GKVCDLSDPVREG-SI 59
           I++T PDG+IK       T  ++A+ IS SL K+ V   +N    ++ DL  P+     +
Sbjct: 89  IEITMPDGTIKAGTSWETTPGEIAKGISNSLYKRTVVARLNKDPNQLWDLDRPLEASCKL 148

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD--FDKEQPFSSD 117
           E++  +D +   V  HS AHI+ EA +  +    + IGP +++GFYY+          + 
Sbjct: 149 ELLNFDDEQGKQVFWHSSAHILGEACERRF-GCSLCIGPPVDNGFYYEMALPGGASVQAS 207

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQ 176
           +   +E  +  I+     F +  ++ ++  E+F   K  YK  I+ + I      T+YR 
Sbjct: 208 DWKPLESIVGSIVKEKQKFERLEMTKDELLEMFSYNK--YKQHIIKDKIADGTKTTVYRN 265

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           G   DLCRGPHV ST +++ F  +MK + +Y+ G      L R+YG ++ +++EL  +  
Sbjct: 266 GPLIDLCRGPHVPSTERIEAF-SIMKNSASYFLGSQENDSLQRVYGVSFPSKKELAAHKK 324

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEIN 295
           +LEE+  RDHRKL  +  LF   E   G   W   G +I+ TL++Y++ +  K DY E+ 
Sbjct: 325 WLEEAAARDHRKLGEQQQLFFFHELSPGSAMWLPHGARIYNTLMAYIKEQYFKRDYHEVI 384

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP + +  LW+ SGHW  Y+ +MF +        D   FALKPMNCPGH  +F H  K+Y
Sbjct: 385 TPNMYNSDLWKVSGHWAHYKDDMFVMDV------DKEQFALKPMNCPGHCLMFGHAPKAY 438

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
            +LP R+A+FG ++RNE SG+L GL RVR F QDDAH+FC ++Q+  E   + + + S+Y
Sbjct: 439 HQLPWRVADFGVLHRNEASGALSGLTRVRRFQQDDAHIFCREDQIGQEITNLFDFLRSMY 498

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
              GF    ++LSTRP+K +G  A WD AE+++K  LD    +++  +   +  G+GAFY
Sbjct: 499 SLLGF-TYKLRLSTRPDKFMGERATWDRAEDMLKVALDEFA-ATEGGVAWELNEGDGAFY 556

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK--------CHPVMIHRAV 527
           GPK +  + D + R+WQC TIQ+DF LP  F   YV + S            P +  +  
Sbjct: 557 GPKIDIKILDCLNREWQCATIQLDFQLPINFGLEYVTADSAAKTKEDAAIKGPEVKAKEP 616

Query: 528 FGSIE------------------------------RFIGIMIENFKGNLPLWLSPIQAIV 557
              +E                              R   I+IE+F G  P+WLSP Q  +
Sbjct: 617 EAVVESAAAAAAPAAADGKEPAKKQLRMSKPLTWKRPPRILIEHFGGKWPMWLSPRQIQI 676

Query: 558 TTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASER 617
             +     EYA+E+  + K     ++ D   ET+  K+R   + +   + I GD+E   R
Sbjct: 677 IPVGRGFFEYAEEVQKIFKDAGFWVDVDLSGETLQKKVRRAQLAQYNFVFIVGDEEMKGR 736

Query: 618 SIGIRRFGSTTTQ 630
            + +R    T++Q
Sbjct: 737 QVNVRYRDDTSSQ 749


>gi|254692867|ref|NP_001157089.1| threonyl-tRNA synthetase, mitochondrial isoform 2 [Mus musculus]
 gi|14290460|gb|AAH08995.1| Tars2 protein [Mus musculus]
          Length = 697

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 221/641 (34%), Positives = 335/641 (52%), Gaps = 66/641 (10%)

Query: 5   IKLTFPDGS-IKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           IK++ P+G  +     + T   +A  IS +LA  AVA  +NG++ DL  P+  +  +  +
Sbjct: 66  IKISLPEGQKVDAVAWNTTPYQLAHQISVTLADTAVAAEVNGELYDLDRPLETDCHLRFL 125

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF--DKEQPFSSDELA 120
           T + P   AV  HS AH++  A +     V +  GP  E GFY+DF   KE+   S EL 
Sbjct: 126 TFDSPEGKAVFWHSSAHVLGAAAEQQLGAV-LCRGPSTESGFYHDFFLGKERTVRSAELP 184

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            +E+  QE+IA   PF +   S ++ R+LF  K   +K+ ++E        T+Y  G   
Sbjct: 185 ILERICQELIAAAQPFRRLEASRDQLRQLF--KDNHFKLHLIEEKVTGPTATVYGCGMSV 242

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+R TGQ+    KL+  + A WR       L R+ G ++   + L  +    E 
Sbjct: 243 DLCRGPHLRHTGQIGAL-KLLTNSSALWRSLGAPETLQRVSGISFPKVELLRNWEARREA 301

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQV 299
           +E RDHR++ +E +LF   E   G  F+  +G +++  L++++R +  +  + E+ TP +
Sbjct: 302 AELRDHRRIGKEQELFFFHELSPGSCFFLPRGTRVYNALVAFIRAEYARRGFSEVKTPTL 361

Query: 300 LDQHLWQQSGHWDSYRANMFAVK-----------------CADDTIKDLRTFALKPMNCP 342
               LW+QSGHW+ YRA+MF++K                 C  DT+      ALKPMNCP
Sbjct: 362 FSTKLWEQSGHWEHYRADMFSLKPPGTDGVDNSQSGHPARCPKDTL------ALKPMNCP 415

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN 402
            H  +F H  +S+RELPVRLA+FG+++R E SGSL GL R+  F QDDAH+FC   Q+  
Sbjct: 416 AHCLMFAHRPRSWRELPVRLADFGALHRAEASGSLGGLTRLWRFQQDDAHIFCAPHQLEA 475

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
           E     + +  +Y   GF    + LSTRP   +G   LWD AE I               
Sbjct: 476 EIQGCLDFLRCVYSVLGF-SFHLALSTRPPGFLGEPRLWDQAEQI--------------- 519

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
                            +  L DA+GR  QCGTIQ+DF LP RF+  Y         PV+
Sbjct: 520 -----------------DVHLHDALGRPHQCGTIQLDFQLPLRFDLQYKGPAGTPECPVL 562

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSI 582
           IHRAV GS+ER +G++ E+  G  PLWLSP+Q +V  + +   EYA+++   L++  L  
Sbjct: 563 IHRAVLGSVERLLGVLAESCGGKWPLWLSPLQVVVIPVRTEQEEYARQVQQCLQAAGLVS 622

Query: 583 ETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           + D  +  T++ ++R   +       + G +E S+R++ +R
Sbjct: 623 DLDADSGLTLSRRVRRAQLAHYNFQFVVGQREQSQRTVNVR 663


>gi|47459403|ref|YP_016265.1| threonyl-tRNA synthetase [Mycoplasma mobile 163K]
 gi|47458733|gb|AAT28054.1| threonyl-tRNA synthetase [Mycoplasma mobile 163K]
          Length = 579

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 208/580 (35%), Positives = 334/580 (57%), Gaps = 39/580 (6%)

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIAR 132
           + H+ +H++A AV  ++P  ++  GP I++GFYYDF  E+P   ++L +I+K+MQ+I  +
Sbjct: 7   LNHTASHLLATAVLKLFPNTKLGFGPAIDEGFYYDFKFEKPLLEEDLKKIKKEMQKITKQ 66

Query: 133 DSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-ENVTLYRQGE-------WFDLCR 184
           +      Y+  +   E F + ++ +K E+ + +  K ENVT Y   +       + DLC 
Sbjct: 67  N------YILEKHHGEDFFNSEKPFKKELYDELKQKGENVTFYAIKDPRLNKIIFNDLCL 120

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           G H+++  +VK F +L+ +AGAYWRG+S++  L+RIYGTAW TQ+EL QYL  L+E ++R
Sbjct: 121 GNHIQNVSEVKHF-ELLSIAGAYWRGNSDKEQLTRIYGTAWETQEELDQYLDLLKERKER 179

Query: 245 DHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLI-SYMRRKIKDDYEEINTPQVLDQ 302
           DHR +A+ +DLF  +   G G   W   G KI   ++ + +    +  ++E++TP V +Q
Sbjct: 180 DHRTIAKNLDLFMFSPLSGLGFPIWLENGMKIKNAIMKTVLELDDRYGFDEVHTPIVGEQ 239

Query: 303 HLWQQSGHWDSYRANMFA-VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
            L++ SGHW  Y+ +M+  +K  ++ +       L+PM CP H+ +FN  L SYR+LP R
Sbjct: 240 KLYETSGHWAHYKDDMYPPIKVENENL------ILRPMTCPHHILIFNSRLYSYRDLPKR 293

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
            +E   ++R+E SG+L G  RVR     + H+F  K Q+ +E   ++ +I      FG +
Sbjct: 294 FSEQSWLFRHEKSGALTGFERVRALQLTEGHIFARKSQIVDEFKHLYKMINEALSIFGIK 353

Query: 422 KIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
              V  S R     EK    D LW+ AE  ++ VL  +K      I    ++GE AFYGP
Sbjct: 354 IDYVSFSRRDPKDKEKFYQDDKLWETAEKDLETVLKELK------IEYKEMIGEAAFYGP 407

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K ++ ++  +  +    T+Q+DF LP +F+  YVN ++E+  PV+IHR + G+ ERF+ I
Sbjct: 408 KIDFQVRTVLNHEITMSTLQLDFLLPEKFDMSYVNENNEREKPVLIHRGLIGTYERFLSI 467

Query: 538 MIENFKGNLPLWLSPIQ---AIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
           ++E  KG  P WL+P Q   A+V       +EYA  +   LKS    +  D R+E ++ K
Sbjct: 468 LLEQNKGVFPFWLAPKQFAIAVVNPNDKMQIEYADSVYKTLKSKKFHVYFDNRDERLSKK 527

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFG--STTTQKV 632
           IRE  I K   I + G++EA  ++I IR +G  STTT  +
Sbjct: 528 IREAQISKTKYIFVIGEEEAKTKTITIRAYGEESTTTSTI 567


>gi|73981321|ref|XP_860741.1| PREDICTED: similar to threonyl-tRNA synthetase-like 1 isoform 4
           [Canis familiaris]
          Length = 695

 Score =  377 bits (968), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 215/637 (33%), Positives = 333/637 (52%), Gaps = 58/637 (9%)

Query: 5   IKLTFPDGS-IKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEII 62
           IK+T P G  +     + T   +A+ +S ++A   VA  +NG++ DL  P+   S ++ +
Sbjct: 64  IKITLPGGQKVDAVAWNTTPYQLAQQMSSTVADTVVAAQVNGELYDLERPLETDSDLKFL 123

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF--DKEQPFSSDELA 120
           T       AV  HS  H++  A + +   V +  GP  E GFY+DF   KE+     EL 
Sbjct: 124 TFSSAEGKAVFWHSSTHVLGAAAEQLLGAV-LCRGPSTECGFYHDFFLGKERTVRGSELP 182

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            +E+  QE++A   PF +  +S ++ R+LF  K   +K+ ++E        T+Y  G   
Sbjct: 183 ALEQICQELVAAAHPFRRLEVSQDQLRQLF--KDNPFKLRLIEEKVTGPTATVYGCGMLV 240

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+R TGQ+    KL+  + + WR       L R+ G ++ T +EL  +  +  E
Sbjct: 241 DLCRGPHLRHTGQIGGL-KLLTNSSSLWRSSGTPETLQRVSGISFPTVEELRAWEEWKGE 299

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQV 299
           +E RDHR++ +  +LF   E   G  F+  +G +++  L++++R +  +  + E+ TP +
Sbjct: 300 AELRDHRRIGKAQELFFFHELSPGSCFFLPRGTRVYNALVAFIRAEYTRRGFSEVKTPTL 359

Query: 300 LDQHLWQQSGHWDSYRANMFAVK-------------CADDTIKDLRTFALKPMNCPGHVA 346
               LW+ SGHW+ Y+ +MF ++             C+     D  T ALKPMNCP H  
Sbjct: 360 FSAKLWELSGHWEHYQEDMFVLQPPGSDRLASSLSVCSTSHSTD--TLALKPMNCPAHCL 417

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           +F H  +S+RELP+RLA+FG ++R E SGSL GL R+R F QDDAH+FC  +Q+  E   
Sbjct: 418 MFAHRPRSWRELPLRLADFGVLHRAEASGSLGGLTRLRCFQQDDAHIFCAPDQLEEEIQG 477

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
             + + S+Y   GF    + LSTRP   +G   LWD AE I                   
Sbjct: 478 CLDFLRSVYAVLGF-SFRLALSTRPSGFLGESCLWDQAEQI------------------- 517

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
                        +  L DA+GR  QCGTIQ+DF LP RF+  Y         PV+IHRA
Sbjct: 518 -------------DVHLHDALGRPHQCGTIQLDFQLPLRFDLQYKGQAGVLERPVLIHRA 564

Query: 527 VFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF 586
           V GS+ER +G++ E++ G  PLWLSP Q +V  + +   EYA+E    L++  L  + D 
Sbjct: 565 VLGSVERMLGVLAESYGGKWPLWLSPFQVVVIPVGAEQEEYAREAQQRLQAAGLVCDLDA 624

Query: 587 RNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
            +  T++ ++R   +       + G KE S++++ IR
Sbjct: 625 DSGLTLSRRVRRAQLAHYNFQFVVGQKEQSKKTVNIR 661


>gi|83859100|ref|ZP_00952621.1| threonyl-tRNA synthetase [Oceanicaulis alexandrii HTCC2633]
 gi|83852547|gb|EAP90400.1| threonyl-tRNA synthetase [Oceanicaulis alexandrii HTCC2633]
          Length = 613

 Score =  376 bits (965), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 219/605 (36%), Positives = 329/605 (54%), Gaps = 48/605 (7%)

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           RHS AH+MA A++ +WP  +  +GP    GFYYD   E+P + ++L +IEK+M+E+  + 
Sbjct: 12  RHSAAHLMAAAIKDLWPNAKFGVGPATATGFYYDIQLEEPLTVEDLPKIEKRMKELRKKK 71

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEIL-----------------ESIPAK--ENVTLY 174
             F  +    ++A +    + + +KVE+L                 ES+  +  + +T Y
Sbjct: 72  KKFYCEAHGIDEAIDYMAKEGQDFKVELLKLLRDKGSTAIAKETGDESVAGEGLDEITFY 131

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
           R G++ DLCRGPHV  +GQV +F KL  +AGAYWRGD+N   L RI+  A+ T++EL   
Sbjct: 132 RTGDFVDLCRGPHVDHSGQVGEF-KLRSIAGAYWRGDANNAQLQRIHALAFETKEELEAE 190

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYE 292
           +  LEE  KRDHRK+ +E+ LF + E+ G+G+  W   G  I   L    R  + +  Y+
Sbjct: 191 VTRLEEQAKRDHRKIGKELGLFTLVEEVGAGLPMWLPAGNVIRDELEKLARITEHRAGYK 250

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
            ++TP +    L+ +SGH   Y  +M+A    D+     + + L+PMNCP H  ++ H  
Sbjct: 251 RVSTPHITKGDLYHRSGHLPYYAEDMYAPIMIDE-----QEYYLRPMNCPHHHMIYAHDQ 305

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
            SYR+LPVRL+E+G VYR E SG L GLMRVRGF Q+DAH++C  +Q  +E L + ++  
Sbjct: 306 WSYRDLPVRLSEYGQVYRYEASGGLSGLMRVRGFCQNDAHIYCRPDQAKDEFLAVMHMHA 365

Query: 413 SIYKDFGFEKIMVKLS----TRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
             Y+ FG +   ++LS       +K V     W  A +I+K  +D      ++      +
Sbjct: 366 DYYRLFGIQDFWMRLSLPDMENLDKYVDDAEGWKTALSILKQAMDESGYPYKE------V 419

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
            GE AFYGPK ++++K  +G ++   T Q+DF    RFN  Y      K    +IHRA  
Sbjct: 420 EGEAAFYGPKVDFMVKSVVGTEYAISTNQLDFMATKRFNLVYTAEDGSKQPVYVIHRAPM 479

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLL-------KSHHLS 581
           GS ERF   +IE++ G  P WLSP QA+V  I     EYAQ + + L        +  + 
Sbjct: 480 GSHERFAAFLIEHYAGKFPTWLSPTQAVVIPIADRHEEYAQTVRDQLFFSEVDSVNTGIR 539

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRR--FGSTTTQKVSLLDAIP 639
            ETDF +E +  KIR    ++IP +++ GD EA    + +R    G   T KV   D I 
Sbjct: 540 TETDFASERMQKKIRNAQHRQIPYMLVVGDAEAENGEVAVRHRDHGDMGTMKVE--DLIA 597

Query: 640 ILTKE 644
            + KE
Sbjct: 598 RIAKE 602


>gi|296203929|ref|XP_002749128.1| PREDICTED: probable threonyl-tRNA synthetase 2, cytoplasmic-like
           [Callithrix jacchus]
          Length = 726

 Score =  376 bits (965), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 208/539 (38%), Positives = 307/539 (56%), Gaps = 24/539 (4%)

Query: 92  VQVAIGPIIEDGFY----YDFDKE-QPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKA 146
           V+VA G  +E   +    Y    E +  SS EL+ +E   + II    PF +  +S E  
Sbjct: 170 VRVADGQTVEGEVWKTTPYQVAAEIRAVSSTELSALENICKVIIKEKQPFERLEVSKEIL 229

Query: 147 RELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGA 206
            E+F+  K  +K  IL    +    T+YR G   DLC+GPHVR TG++K   K+ K +  
Sbjct: 230 LEMFKYNK--FKCRILNEKVSTATTTVYRCGPLIDLCKGPHVRHTGKIKTI-KIFKNSST 286

Query: 207 YWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVI 266
           YW G+     L RIYG ++   + +  +  F EE++ RDHRK+ +E +LF   +   G  
Sbjct: 287 YWEGNPEMETLQRIYGISFPDNKMMRNWEKFQEEAKNRDHRKIGKEQELFFFHDLSPGSC 346

Query: 267 FWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD 325
           F+  +G  I+ TL+ ++R +  K D+ E+ +P + +  LW+ SGHW  Y  NMF  +   
Sbjct: 347 FFLPRGAFIYNTLVDFIREEYHKRDFTEVLSPNMFNSKLWEASGHWQHYSENMFTFEIEK 406

Query: 326 DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRG 385
           DT      FALKPMNCPGH  +F H  +S+RE+P+R A+FG ++RNE SG+L GL RVR 
Sbjct: 407 DT------FALKPMNCPGHCLMFAHRPRSWREMPIRFADFGVLHRNELSGTLSGLTRVRR 460

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
           F QDDAH+FCT EQ+  E       + S+Y  FGF    + LSTRPE  +G   +W++AE
Sbjct: 461 FQQDDAHIFCTVEQIEEEIKGCLQFLQSVYSTFGF-SFQLNLSTRPENFLGEIEMWNEAE 519

Query: 446 NIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSR 505
             ++  L  ++     ++N     G+GAFYGPK +  +KDAIGR  QC TIQ+DF LP R
Sbjct: 520 KQLQNSL--MEFGEPWKMNP----GDGAFYGPKIDIKIKDAIGRYHQCATIQLDFQLPIR 573

Query: 506 FNAFYVNSHS-EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA 564
           FN  YV+    +K  PV+IHRA+ GS+ER I I+ EN+ G  P WLSP Q +V  +  + 
Sbjct: 574 FNLTYVSKDGDDKKRPVIIHRAILGSVERMIAILSENYGGKWPFWLSPRQVMVIPVGPTC 633

Query: 565 VEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
            +YA ++++         + D  +  T+N KIR   + +   I++ G+KE    ++ +R
Sbjct: 634 EKYALQVSSEFFEEGFMADIDLDHSCTLNKKIRNAQLAQYNFILVVGEKEKINNAVNVR 692


>gi|240047776|ref|YP_002961164.1| threonyl-tRNA synthetase [Mycoplasma conjunctivae HRC/581]
 gi|239985348|emb|CAT05361.1| Threonyl-tRNA synthetase [Mycoplasma conjunctivae]
          Length = 578

 Score =  375 bits (964), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 216/598 (36%), Positives = 339/598 (56%), Gaps = 53/598 (8%)

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIAR 132
           + HS +H++A A+++++P+V++  GP  ++GFYYDF+   P S+ +L +IEK M+++++ 
Sbjct: 10  LNHSTSHLLALAIKTLYPDVKLGFGPSTKEGFYYDFEFSTPISNLDLPKIEKLMKKLVSS 69

Query: 133 DSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-ENVTLY-----RQGEWF-DLCRG 185
           +     Q L  +     F +  + YK E+LE   ++ +N+T Y     +    F DLC G
Sbjct: 70  NL----QILQTDGKNIDFST--QIYKKELLEEFESQNKNITFYSIVDAKNNILFEDLCVG 123

Query: 186 PHVRSTGQVK--KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            HV   G++K  K FKL+ +AGAYWRGDS    L+RIYGT+W+TQ+EL  +L  LEE ++
Sbjct: 124 GHV---GEIKNIKHFKLLNIAGAYWRGDSKNIQLTRIYGTSWHTQEELNSFLALLEERKE 180

Query: 244 RDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRRKIKDD---------YEE 293
           RDHRK+ +E+ +F   +  G G   W   G KI          KIKD          + E
Sbjct: 181 RDHRKIGKELKIFTFTKWFGLGFPVWLENGMKI--------HNKIKDKILAFDKRYGFRE 232

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFA-VKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           + TP   ++HL++ SGH   YR +MF  +K   D +        +PM CP H+ +F+   
Sbjct: 233 VLTPHFGEKHLYETSGHLAHYRDDMFEPIKAESDYL------IPRPMTCPHHIVLFDKAQ 286

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
            SYR+LP R++E   +YR E SG+L GL RVR     + H+F +++Q+F+EC  +  +I 
Sbjct: 287 CSYRQLPYRISEQSRLYRFEKSGALTGLERVRSMDLTEGHIFVSRKQIFDECKHLFTMIE 346

Query: 413 SIYKDFGFEKIMVKLSTR-PE---KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
            +   F  +   +  S R PE   K    + +W+DAEN +K  LD+      ++I     
Sbjct: 347 EVLDFFEIKIDYISFSRRDPEDKSKFYDDEQMWNDAENDLKKFLDSHNVKYVEKI----- 401

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
            GE AFYGPK ++ +K A+ ++    T+Q+DF LP +FN ++ N ++EK  PV+IHR + 
Sbjct: 402 -GEAAFYGPKIDFQIKTALNKEITISTLQLDFLLPKKFNIYFNNENNEKETPVLIHRGLI 460

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRN 588
           G+ ERFI I++E  KG LP WLSP Q  V  I     +YA+ + + L  ++  +E D R+
Sbjct: 461 GTYERFISILLEQTKGVLPFWLSPKQVSVIPILPKHDDYAEFVRSELAKNNFEVEVDTRD 520

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           E I  KIRE  I+K+   +I GD E   + I  R +G   +   SL + I +L  +++
Sbjct: 521 ERITKKIREAQIQKVKYQLIIGDSEVENQKITYREYGKQESTTTSLDEFIKLLNSQNV 578


>gi|54020620|ref|YP_116116.1| threonyl-tRNA synthetase [Mycoplasma hyopneumoniae 232]
 gi|53987793|gb|AAV27994.1| threonyl-tRNA synthetase [Mycoplasma hyopneumoniae 232]
          Length = 579

 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 203/587 (34%), Positives = 339/587 (57%), Gaps = 41/587 (6%)

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIAR 132
           + HS +H++A A++ ++P+V+  IGP+ +DGFYYDFD     S  +  +IEK M++++++
Sbjct: 9   LNHSSSHLLALAIKILYPDVKFGIGPVFDDGFYYDFDLSVSISQSDFPKIEKLMKKLVSK 68

Query: 133 DSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-ENVTLY-----RQGEWF-DLCRG 185
           +   +      E   +  + + + YK E+   +  K E +T +     +    F DLC G
Sbjct: 69  NLKIV------ETDGKNLDFQNQIYKAELKNDLEKKGEKITYFSIVDSKNNILFEDLCYG 122

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
            H+ S G+++ F KL+K+AGAYW+GDS    L+RIYGT+W++++ L ++L  L+E ++RD
Sbjct: 123 NHLESLGKIQNF-KLLKIAGAYWKGDSKNKQLTRIYGTSWDSKENLDKFLGILQERQERD 181

Query: 246 HRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD-----DYEEINTPQV 299
           HRK+  ++ LF  +   G G   W   G +I+  +    R+KI +      ++E+ TP  
Sbjct: 182 HRKIGAKLKLFTFSSYFGHGFPVWLENGMRIYNKI----RQKILEFDRNYGFKEVLTPHF 237

Query: 300 LDQHLWQQSGHWDSYRANMF-AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
             + L++ SGH   YR +MF  +K  ++ +        +PM CP H+ +F+  L SYR L
Sbjct: 238 GHKELYKISGHLLHYRDDMFKGLKIENEEL------IPRPMTCPHHIILFSQQLFSYRNL 291

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P R++E   +YR E SG+L GL RVR     + H+F +K Q+F+E   +  +I  +   F
Sbjct: 292 PYRISEQSRLYRYEKSGALLGLERVRAMDLTEGHIFVSKSQIFSEISHLFQMISEVLDFF 351

Query: 419 GFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
             +   +  S R     +K    D +WD AE  +K  L+      Q++IN    +GE AF
Sbjct: 352 KVQIFYISFSKRDPKNKDKFFQDDQMWDQAEADLKQFLE------QNKINYIEKIGEAAF 405

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK ++ +K A+ ++    T+Q+DF LP +F   ++N H++K  P++IHR + G+ ERF
Sbjct: 406 YGPKIDFQVKTALNKELTISTLQLDFLLPKKFKISFINEHNKKETPILIHRGLIGTYERF 465

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
           I +++E  KGNLP W+SP Q IV  +     ++AQ+I  +L     + E D R+E I+ K
Sbjct: 466 IALLLEQSKGNLPFWISPKQIIVIPVAEKHNDFAQKIHKILFDLGFNSEIDLRSERISRK 525

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           IRE +++KI   +I GD+E ++  I  R+FGS    ++SL+D + +L
Sbjct: 526 IREANLEKINFQVIIGDEEITKNEITYRKFGSPELFRISLVDFVDLL 572


>gi|149057086|gb|EDM08409.1| threonyl-tRNA synthetase-like 2, isoform CRA_b [Rattus norvegicus]
          Length = 708

 Score =  373 bits (958), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 204/530 (38%), Positives = 298/530 (56%), Gaps = 19/530 (3%)

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
           SS EL+ +E   + II    PF +  +S +   E+F+  K  +K  IL+        T+Y
Sbjct: 180 SSTELSALENICKTIIKEKQPFERLEVSKDSLLEMFKYNK--FKCRILKEKVDTPTTTVY 237

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
           R G   DLC+GPHVR TG++K   K+ K +  YW G+     L R+YG ++   + +  +
Sbjct: 238 RCGPLIDLCKGPHVRHTGKIKAI-KIFKNSSTYWEGNPEMETLQRVYGISFPDSKMMRDW 296

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEE 293
             F EE+  RDHRK+ +E +LF   +   G  F+  +G  I+ TL+ ++R +  K ++ E
Sbjct: 297 EKFQEEARSRDHRKIGKEQELFFFHDLSPGSCFFLPRGAFIYNTLMDFIREEYHKRNFTE 356

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           + +P + +  LW+ SGHW  Y  NMF      DT      FALKPMNCPGH  +F H  +
Sbjct: 357 VLSPNMYNSKLWETSGHWQHYSNNMFTFDIEKDT------FALKPMNCPGHCLMFAHRPR 410

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           S+RE+PVR A+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+  E     + + S
Sbjct: 411 SWREMPVRFADFGVLHRNELSGTLTGLTRVRRFQQDDAHIFCMVEQIEEEIKGCLHFLQS 470

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           +Y  FGF    + LSTRPE  +G   +WD+AE  ++  L         +IN     G+GA
Sbjct: 471 VYSTFGF-SFQLNLSTRPEHFLGETEIWDEAERQLQNSLTGFGKPW--KINP----GDGA 523

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIE 532
           FYGPK +  +KDAIGR  QC TIQ+DF LP RFN  YV+    +K  PV+IHRA+ GS+E
Sbjct: 524 FYGPKIDIKIKDAIGRYHQCATIQLDFQLPIRFNLTYVSKDGDDKNRPVIIHRAILGSVE 583

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE-TI 591
           R I I+ EN+ G  PLWLSP Q ++  +  +   YA +++          + D  +  T+
Sbjct: 584 RMIAILSENYGGKWPLWLSPRQVMIIPVGPACENYALQVSKECFEEGFMADVDLDDSCTL 643

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           N KIR   + +   I++ G+KE    S+ +R   +    ++S+   I  L
Sbjct: 644 NKKIRNAQLAQYNFILVVGEKEKLNNSVNVRTRDNKIHGEISITSVIEKL 693


>gi|15829217|ref|NP_326577.1| threonyl-tRNA synthetase [Mycoplasma pulmonis UAB CTIP]
 gi|22654134|sp|Q98PH6|SYT_MYCPU RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|14090161|emb|CAC13919.1| THREONYL-TRNA SYNTHETASE 1 (THREONINE--TRNA LIGASE) (THRRS)
           [Mycoplasma pulmonis]
          Length = 589

 Score =  373 bits (957), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 212/576 (36%), Positives = 324/576 (56%), Gaps = 34/576 (5%)

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIAR 132
           + H+ +H++A A+  ++P V++  GP IE+GFYYDF+ E P S  EL +IEK M+++ + 
Sbjct: 19  LNHTTSHLLAAAIVQLYPNVKLGFGPAIEEGFYYDFEFENPLSKLELLKIEKLMKKLASM 78

Query: 133 DSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-ENVTLYRQGE------WFDLCRG 185
           +   +K   S+      ++   + YK E+ + +  K + +T Y   +      + DLC G
Sbjct: 79  NLKMVKVDGSN------YDFTNKPYKKELYDELKQKGQEITFYSLVDTNGKEIFTDLCAG 132

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
            HV ST ++  F KL+ +AGAYWRG+SN   L+RIYG+++  + EL  YL  +E+ ++RD
Sbjct: 133 GHVESTSKINNF-KLLSLAGAYWRGNSNNIQLTRIYGSSFYKKDELENYLKVIEDRKERD 191

Query: 246 HRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTL---ISYMRRKIKDDYEEINTPQVLD 301
           HRK+ + + +F  +   G G   W +KG  I + +   I Y+ RK    +EE+ +P   +
Sbjct: 192 HRKIGKNLGIFTFSSLSGLGFPIWLKKGMLIKRAIEKEILYLDRKY--GFEEVLSPHFGE 249

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + L+ +SGH   Y+  MF     ++          +PM CP H+ +++   +SYRELP+R
Sbjct: 250 ESLYIKSGHLAHYQETMFKSLEVEN-----EKLIPRPMTCPHHIIIYDAFPRSYRELPLR 304

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           L+E   +YR E SG+L GL RVR     + H+F  ++Q+ +E L + NLI    K F  +
Sbjct: 305 LSEQSRLYRYEKSGALTGLERVRTMDLTEGHIFIRQDQIKDEVLNMINLIQETLKIFKIK 364

Query: 422 KIMVKLSTR---PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
              V LS R    EK    D +WD AE+ +K +LD      Q++I+  V  GE AFYGPK
Sbjct: 365 IDHVALSLRDNDKEKFFDDDQMWDQAESALKEILD------QNKIDYIVEKGEAAFYGPK 418

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++ +K  +       TIQ+DF LP +FN  Y+     K  P+MIHR + G+ ERF+ I+
Sbjct: 419 IDFQVKTVLNNIITMSTIQLDFLLPRKFNISYIAPDGSKQTPLMIHRGLIGTYERFVSIL 478

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           +E  KGN P WLSP Q IV  I     EYA EI + +   + ++E D R+ETIN KIRE 
Sbjct: 479 LEQTKGNFPFWLSPSQVIVLPIAKEFKEYAFEIYSKIFKQNFNVEIDNRDETINKKIREA 538

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
            I K    II G +E   ++I IR +G   T  + L
Sbjct: 539 QINKYKYQIIIGKQEMENKTIAIREYGKVQTITMDL 574


>gi|62320472|dbj|BAD94986.1| putative protein [Arabidopsis thaliana]
          Length = 426

 Score =  373 bits (957), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 187/415 (45%), Positives = 270/415 (65%), Gaps = 17/415 (4%)

Query: 216 MLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWK 274
           ML RIYGTAW ++++L  YL+F EE+++RDHR++ +++DLF I  E G G++FWH KG  
Sbjct: 1   MLQRIYGTAWESEEQLKAYLHFKEEAKRRDHRRIGQDLDLFSIQDEAGGGLVFWHPKG-A 59

Query: 275 IFQTLI--SYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           I + +I  S+ +  ++  Y+ I TP V    LW+ SGH D YR NM+     +D +    
Sbjct: 60  IVRNIIEESWKKMHVEHGYDLIYTPHVAKADLWKISGHLDFYRENMYDQMEIEDEL---- 115

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
            + L+PMNCP H+ ++    +SYR+LP+R+AE G+VYR E SGSLHGL RVRGFTQDDAH
Sbjct: 116 -YQLRPMNCPYHILLYQRKRQSYRDLPIRVAELGTVYRYELSGSLHGLFRVRGFTQDDAH 174

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
           +FC ++Q+ +E   + +L   I   FGF K  V LSTRPEK VG D +W+ A   ++  L
Sbjct: 175 IFCLEDQIKDEIRGVLDLTEEILSRFGFNKYEVNLSTRPEKSVGGDDIWEKATCALRDAL 234

Query: 453 DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
           D    S +      V  G GAFYGPK +  ++DA+GR WQC TIQVDFNLP RF+  YV+
Sbjct: 235 DDRGWSYE------VDEGGGAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDITYVD 288

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIA 572
           ++S+K  P+MIHRAV GS+ERF G++IE++ G+ PLWLSP+Q  V  +T + +E+ +E++
Sbjct: 289 TNSDKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPVQVRVLPVTDNQLEFCKEVS 348

Query: 573 NLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR-RFGS 626
             L++  +  E     E +   IR    +KIP++ + G KE    ++ +R RFG 
Sbjct: 349 KKLRACGVRAEL-CHGERLPKLIRNAETQKIPLMAVVGPKEVETGTVTVRSRFGG 402


>gi|291537165|emb|CBL10277.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Roseburia
           intestinalis M50/1]
          Length = 494

 Score =  372 bits (956), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 203/504 (40%), Positives = 319/504 (63%), Gaps = 25/504 (4%)

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQIE 123
           ED R L  + HSCAH+MA+AV+ ++P  +  +GP++++GFYYD D  +   + D +A IE
Sbjct: 6   EDER-LNTLNHSCAHVMAQAVKHLYPNAKFWVGPVVKEGFYYDIDLGDTAVNDDVIAAIE 64

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M+++        ++ +S  +A ELF  K + YK+++++ +    N+++Y QG++ DLC
Sbjct: 65  KEMKKVCKEGKKIYRREISKAEALELF--KDDEYKLDLIDGL-EDGNISVYDQGDFTDLC 121

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +T ++ K FKL+K +G YW+GD+N  ++ RIYG  + T +EL ++L  LEE++ 
Sbjct: 122 RGPHVDNT-KLCKNFKLIKYSGVYWKGDANNHVMQRIYGVCFPTAEELEEHLKLLEEAKD 180

Query: 244 RDHRKLAREMDLFHIAED--GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVL 300
           RDHRK+ +EM LF +++D  G G+  +  KG+ ++Q L +Y++ K  K  Y  + TP V 
Sbjct: 181 RDHRKIGKEMHLF-MSDDLVGRGLPMFLPKGYTVWQELENYIKAKERKLGYLHVMTPCVG 239

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
             +L++ SGHWD Y+ NMF     +       +F L+PMNCP H+ ++ + + SY++LP+
Sbjct: 240 TVNLYKTSGHWDHYKENMFPAMEVEG-----ESFVLRPMNCPHHMMIYANRMHSYKDLPI 294

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+ E    +R E SG+L G+ R R F Q+DAH+F T EQ+ +E  K+  LI   YKDF  
Sbjct: 295 RIGEIAHDFRFEASGTLKGIERGRHFCQNDAHLFVTPEQIESEFAKVVELIFDTYKDFNI 354

Query: 421 EKIMVKLSTR-PEKRV---GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
                 LS R PE +V     D +W++AEN ++ VLD I     + I      GE AFYG
Sbjct: 355 TDYRCVLSLRDPEDKVKYHDDDEMWNNAENALRKVLDDIGIEYTEEI------GEAAFYG 408

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK +  +K AIG ++   T Q+DF LP++FN  Y++S   K  PV++HRA+ GS++RF+ 
Sbjct: 409 PKLDVNVKPAIGNEYTLSTCQLDFCLPAKFNLSYIDSDGTKKTPVVLHRAILGSLDRFMA 468

Query: 537 IMIENFKGNLPLWLSPIQAIVTTI 560
            ++E  KGNLPLWL+P+QA +  +
Sbjct: 469 YILEETKGNLPLWLAPVQAKILPV 492


>gi|237844903|ref|XP_002371749.1| threonyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
 gi|211969413|gb|EEB04609.1| threonyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
          Length = 844

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 230/646 (35%), Positives = 352/646 (54%), Gaps = 65/646 (10%)

Query: 49  DLSDPVREGS--IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYY 106
           D+  P+ EGS  ++++  +   +  V  HS AHI+ +A+++ +   Q+ +GP + +GFYY
Sbjct: 201 DMKRPL-EGSCRLQLLKFDSDEAKHVFWHSSAHILGQAIEATF-GAQLTVGPALTNGFYY 258

Query: 107 D-FDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES- 164
           D +  +   + +   ++E     +I  D  F +   S  +A ELF      +KV+++ S 
Sbjct: 259 DAYMGDAKVTEESYGRLEAAAAAVIKEDQAFRRLVCSKAEALELFADN--PFKVQLIASK 316

Query: 165 IPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTA 224
           IP     T+Y  G   DLCRGPH+ STG+VK F +++K + +YW G  +   L R+YG +
Sbjct: 317 IPEHGLTTVYCCGSLVDLCRGPHIPSTGKVKAF-QVIKHSASYWLGRQHLDSLQRVYGVS 375

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM 283
           +  ++ L  YL  LEE++KRDHR L + + LF    + S G  FW   G K++  L  +M
Sbjct: 376 FPDKKLLKDYLKLLEEAKKRDHRVLGQNLHLFFFDTNVSPGSCFWLPDGAKVYNKLCMFM 435

Query: 284 RRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
           R + +   ++E+ +P +    LW+ SGH+ +Y+ NM+          + + + LKPMNCP
Sbjct: 436 REEYRFRGFQEVISPNIFSCDLWKVSGHYQNYKENMYLFDV------EGKEWGLKPMNCP 489

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN 402
           GH  +F H   SYR+LP+RLA+FG ++RNE SGSL GL RVR F QDDAH+FC  +Q+  
Sbjct: 490 GHCIMFKHLAPSYRQLPLRLADFGVLHRNELSGSLTGLTRVRRFQQDDAHIFCRLDQVKE 549

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
           E     N +  +Y  FGF    + LSTRP+K +G  A+WD AE  +K  L+      Q  
Sbjct: 550 EVADALNFLFFVYDQFGF-SFELFLSTRPKKALGERAVWDSAEAALKAALEETGRPWQ-- 606

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV----------- 511
           +N     G+GAFYGPK +  L DA+ R  QCGTIQ+DF LP RFN  Y            
Sbjct: 607 LNP----GDGAFYGPKIDIRLWDALKRPHQCGTIQLDFQLPIRFNLQYRTQDEAVAGARD 662

Query: 512 --------------NSHSEK---------------CHPVMIHRAVFGSIERFIGIMIENF 542
                         + H +K                 PV+IHRA+ GSIER   ++IE+ 
Sbjct: 663 KAKEDKETGEKRTDSEHEQKEEEAFGVELPLRPGMARPVIIHRAILGSIERMCAVVIEHT 722

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G LP WLSP Q IV  I+    +YA  + ++L S    +  D  N T+N KIRE  +++
Sbjct: 723 GGKLPFWLSPKQCIVLPISDKVNDYAASVRDVLHSCGYEVGLDVSNNTVNKKIREAQLQQ 782

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKV-SLLDAIPILTKESLP 647
              +++ G+KE +++++ +R       QKV S+ D + +  K+ +P
Sbjct: 783 WNYLLVVGEKERADKTVTVRDRADPEHQKVLSMEDLLTLFEKQGMP 828


>gi|72080917|ref|YP_287975.1| threonyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448]
 gi|71914041|gb|AAZ53952.1| threonyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448]
          Length = 579

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 203/587 (34%), Positives = 337/587 (57%), Gaps = 41/587 (6%)

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIAR 132
           + HS +H++A A++ ++P V+  IGP+ +DGFYYDFD     S  +  +IEK M++++++
Sbjct: 9   LNHSSSHLLALAIKILYPGVKFGIGPVFDDGFYYDFDFSVSISQSDFPKIEKLMKKLVSK 68

Query: 133 DSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-ENVTLY-----RQGEWF-DLCRG 185
           +   +      E   +  + + + YK E+   +  K E +T +     +    F DLC G
Sbjct: 69  NLKIV------ETDGKNLDFQNQTYKAELKSDLEKKGEKITYFSIVDSKNNILFEDLCYG 122

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
            H+ S G+++ F KL+K+AGAYW+GDS    L+RIYGT+W++++ L ++L  L+E ++RD
Sbjct: 123 NHLESLGKIQNF-KLLKIAGAYWKGDSKNKQLTRIYGTSWDSKENLDKFLGILQERQERD 181

Query: 246 HRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD-----DYEEINTPQV 299
           HRK+  ++ LF  +   G G   W   G +I+  +    R+KI +      + E+ TP  
Sbjct: 182 HRKIGAKLKLFTFSSYFGLGFPVWLENGMRIYNKI----RQKILEFDRNYGFREVLTPHF 237

Query: 300 LDQHLWQQSGHWDSYRANMF-AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
             + L++ SGH   YR +MF  +K  ++ +        +PM CP H+ +F+  L SYR L
Sbjct: 238 GHKELYKISGHLLHYRDDMFKGLKIENEEL------IPRPMTCPHHIILFSQQLFSYRNL 291

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P R++E   +YR E SG+L GL RVR     + H+F +K Q+F+E   +  +I  +   F
Sbjct: 292 PYRISEQSRLYRYEKSGALLGLERVRAMDLTEGHIFVSKSQIFSEISHLFQMISEVLDFF 351

Query: 419 GFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
             +   +  S R     +K    D +W+ AE  +K  LD      Q++IN    +GE AF
Sbjct: 352 KVQIFYISFSKRDPKNKDKFFQDDQMWEQAEADLKQFLD------QNKINYIEKIGEAAF 405

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK ++ +K A+ ++    T+Q+DF LP +F   ++N H++K  P++IHR + G+ ERF
Sbjct: 406 YGPKIDFQVKTALNKELTISTLQLDFLLPEKFKISFINEHNKKETPILIHRGLIGTYERF 465

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
           I +++E  KGNLP W+SP Q IV  +     ++AQ+I  +L     + E D R+E I+ K
Sbjct: 466 IALLLEQSKGNLPFWISPKQIIVIPVAEKHNDFAQKIHKILFDLGFNSEIDLRSERISRK 525

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           IRE +++KI   +I GD+E ++  I  R+FGS    ++SL+D + +L
Sbjct: 526 IREANLEKINFQVIIGDEEIAKNEITYRKFGSPELFRISLVDFVDLL 572


>gi|13542113|ref|NP_111801.1| threonyl-tRNA synthetase [Thermoplasma volcanium GSS1]
 gi|22654129|sp|Q978W0|SYT_THEVO RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|14325544|dbj|BAB60447.1| tRNA synthetase Thr [Thermoplasma volcanium GSS1]
          Length = 660

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 221/635 (34%), Positives = 353/635 (55%), Gaps = 59/635 (9%)

Query: 36  KKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           KK +AV    K  DL +   E  +++ +  +    L ++RHS AH++A AV +++PE   
Sbjct: 21  KKVIAVKKGDKFLDLDEIAGEDEAVQPVYLDSEDGLYILRHSAAHLLANAVTNLFPEALP 80

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
             GP++E+GFYYDFD  +P + ++L++IE++M+ I+  + P  +   S ++  ++F   K
Sbjct: 81  NTGPVVENGFYYDFDM-KPITEEDLSKIEEEMKRIVKENVPIRRMIYSKDELLKIFS--K 137

Query: 155 EAYKVEIL-ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSN 213
             YK+ I+ E++  K +V  Y+QG + DLC GPHV STG +K F KL+ +A A ++ D +
Sbjct: 138 NPYKIRIINENVEGKSSV--YQQGNFVDLCLGPHVPSTGYIKAF-KLLSIASAVYKYDES 194

Query: 214 RPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDL-FHIAEDGSGVIFWHRKG 272
           + ++ RIYGTA+  ++ L +YL  LEE++KRDHRK+  EMDL    +E   G   +   G
Sbjct: 195 KNLV-RIYGTAFPDEKSLRRYLENLEEAKKRDHRKIIAEMDLAVFNSEWAPGFPMYTPNG 253

Query: 273 WKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
             I + LI YM     K+ + ++ TP V    +W+QSGH+  Y+ NM+        + D 
Sbjct: 254 QIIRKELIKYMDYVNGKNGWTDVWTPHVFKDTIWKQSGHYAKYKPNMYLF-----VLPDG 308

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
            ++ +KPMNCPGH+A+F     SYR+LPV+ +E G+VYR E SG + GL R R FTQDD 
Sbjct: 309 DSYGIKPMNCPGHIAIFARRKYSYRDLPVKYSEPGTVYRYEKSGEVGGLTRPRAFTQDDG 368

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKD-FGFEKIMVKLS--------------------TR 430
           H F   +Q+  E   +  ++   +   FG  ++   LS                     R
Sbjct: 369 HEFIRMDQIVGEIKTLLGMVRETFTTVFGNIEMAFDLSVIDKEHPENYLLSYVCKDCGNR 428

Query: 431 PEKRVGSD---------------ALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
            E   G+D               + WD+A   ++  +D++  + ++        GE AFY
Sbjct: 429 VEGLRGTDIECPVCHSHNMDPDFSTWDNATEQLRQAMDSMGITYKE------YPGEAAFY 482

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +KDA+GR WQ  TIQVDF +P  F   Y NS  ++   V+IHRA++GS ERF+
Sbjct: 483 GPKIDVHVKDALGRMWQLSTIQVDFFMPINFGLTYTNSEGKEERVVIIHRAIYGSYERFM 542

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            I++E+F G LP WL+PIQ  V  + ++  EYA+++   L    +    D   +T++ KI
Sbjct: 543 AILLEHFAGKLPTWLTPIQTYVIPVGTANAEYARKVNKSLLDAGIRSVVDDGPDTVSKKI 602

Query: 596 REHSIKKIPIIIICGDKEASERSIGIR-RFGSTTT 629
           +    ++   I++ G KE  + ++ +R R G + T
Sbjct: 603 KMIHDQRPSYIVVVGAKEEQDNTVTVRNRAGKSKT 637


>gi|304373385|ref|YP_003856594.1| Threonyl-tRNA synthetase [Mycoplasma hyorhinis HUB-1]
 gi|304309576|gb|ADM22056.1| Threonyl-tRNA synthetase [Mycoplasma hyorhinis HUB-1]
          Length = 581

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 209/588 (35%), Positives = 331/588 (56%), Gaps = 41/588 (6%)

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIAR 132
           + HS +H++A AV  ++P+VQ+  GP  ++GFYYDF    P S  +L +IEK MQ++ A 
Sbjct: 8   LNHSASHLLALAVIKLFPDVQLGFGPATDEGFYYDFKFVNPLSEHDLIKIEKMMQKL-AN 66

Query: 133 DSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKE-NVTLYR-----QGEWF--DLCR 184
           ++  +KQ L  +      +  K+ +K E+L+   ++   +T +      + E+   DLC 
Sbjct: 67  NNFVMKQTLGTQ-----IDFSKQIFKKELLDQFTSENRKITFFSIVNPTKNEYLFEDLCA 121

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           G H+ +  Q+K F KL+ +AGAYWRG      L+RIYGTAW+T++EL ++L+ L+E ++R
Sbjct: 122 GGHIENMKQIKHF-KLLSIAGAYWRGKVENEQLTRIYGTAWDTKEELEEFLHILQERKER 180

Query: 245 DHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRRKI-----KDDYEEINTPQ 298
           DHRKL +E+ LF   +  G G   W   G KI    ++ ++ KI     K  ++E+ TP 
Sbjct: 181 DHRKLGKELKLFTFNKLFGQGFPIWLEDGMKI----VNKIKEKILFYDKKYGFKEVFTPH 236

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
             +Q L++ SGH+  Y+ +MF     +           +PM CP H+ +F+   KSYREL
Sbjct: 237 FGEQKLYEISGHFTHYKEDMFGALVVEG-----ENLIPRPMTCPHHIILFDTFKKSYREL 291

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P R++E   +YR E SG+L GL RVR     + H+F  K Q+ +E   ++ +I  + K F
Sbjct: 292 PYRISEQSRLYRYEKSGALTGLERVRSMLLTEGHIFVAKTQIVDEFKHLYQMISEVLKFF 351

Query: 419 GFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
             E   V  S R     EK    D +W+ AE+ ++ VL  +    Q++I      GE AF
Sbjct: 352 KIEVNYVSFSKRDPENKEKFFDDDQMWNQAESDLEKVLKELGVEYQEKI------GEAAF 405

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK ++ +K  +  +    T+Q+DF LP +F+  ++N  + K  P++IHR + G+ ERF
Sbjct: 406 YGPKIDFQIKTVLNHEITISTLQLDFLLPKKFDISFINQDNAKETPILIHRGLIGTYERF 465

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINY 593
           + I++E  KG LP WLSP Q +V  I +S   ++A EIA  L+  + ++  D RNE IN 
Sbjct: 466 VSILLEQTKGILPFWLSPKQFVVIPIENSKHSDFALEIAKKLEELNFNVTVDDRNERINK 525

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           KIRE  ++K    II GD+E   ++I  R +G   +  ++  D I  +
Sbjct: 526 KIREAQMQKTKFQIIVGDQEVENKNITYREYGQQNSNTLNFEDLIKFI 573


>gi|39942942|ref|XP_361008.1| conserved hypothetical protein [Magnaporthe oryzae 70-15]
 gi|58257459|gb|AAW69351.1| threonyl-tRNA synthetase-like protein [Magnaporthe grisea]
 gi|145009886|gb|EDJ94542.1| conserved hypothetical protein [Magnaporthe oryzae 70-15]
          Length = 812

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 204/516 (39%), Positives = 305/516 (59%), Gaps = 21/516 (4%)

Query: 5   IKLTFPDGSIKNFPV-HATGSDVAESISRSLAKKAVAVAING---KVCDLSDPV-REGSI 59
           I +T PDGSIKN      T +D+A+ IS SL K+ V   ++G   ++ DL  P+ R   +
Sbjct: 88  ITITMPDGSIKNGTAWETTPADIAKGISNSLFKRTVVARLDGDKEQLWDLERPLERSCKL 147

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD--FDKEQPFSSD 117
           E++   DP+   V  HS AHI+ EA +  +    + IGP +++GFYY+          S 
Sbjct: 148 ELLDFSDPQGQFVFWHSSAHILGEAAERRF-GCSLCIGPPVDNGFYYEMALPDGAAVQSS 206

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQ 176
           +   +E  + +I+     F +  LS E   E+F+  K  YK  I+ + I      T+YR 
Sbjct: 207 DWKPLETLVSKIVKEKQKFERLVLSKEDLLEMFKYNK--YKQHIIKDKIADGTKTTVYRN 264

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           G   DLCRGPHV  TG+++ F  +MK + +Y+ GD +   L RIYG ++ T+++LT+Y  
Sbjct: 265 GPLIDLCRGPHVPDTGRIEAF-AIMKNSASYFLGDKDNDSLQRIYGVSFPTKKQLTEYQK 323

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEIN 295
           FLEE+ KRDHR++ ++ +LF   +   G   W   G +I+ TL+SY+R    + +YEE+ 
Sbjct: 324 FLEEAAKRDHRRIGKDQELFFFHDYSPGSAMWLPHGTRIYNTLLSYIREIYWEKNYEEVI 383

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP + +  LW+QSGHW  Y+ +MF +K   DT      F LKPMNCPGH  +F H  +S+
Sbjct: 384 TPNIYNADLWKQSGHWQFYKDDMFVIKDEKDT------FGLKPMNCPGHALMFAHRERSH 437

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP R+A+FG ++RNE SG+L GL RVR F QDDAH+FC ++Q+ +E L + + +  +Y
Sbjct: 438 RELPWRVADFGVLHRNEASGALSGLTRVRRFQQDDAHIFCREDQIKDEILDLFDFLRKMY 497

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
              G     ++LSTRPEK +G+   WD AE  ++  LD    +S+  +   +  G+GAFY
Sbjct: 498 TVMGL-TFKLRLSTRPEKYMGAIETWDKAEESLRQALDEFA-ASEGGVAWELNAGDGAFY 555

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
           GPK +  + D + R+WQC TIQ+DF  P  FN  Y+
Sbjct: 556 GPKIDIAIMDCLNREWQCATIQLDFVQPQNFNLEYM 591



 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)

Query: 518 CHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKS 577
             PVMIHRA+ GSIERF GI+ E++ G  PLWLSP Q +V  +     +YA+E+ ++ K 
Sbjct: 658 ARPVMIHRAMAGSIERFTGILCEHYAGKWPLWLSPRQILVVPVGKGFYDYAEEVRSIFKK 717

Query: 578 HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK----VS 633
             + ++ D    T+  KIR   + +   I + G +E + R + +R      TQ     ++
Sbjct: 718 AKMFVDVDTSGNTLMKKIRTGQLAQYNFIFVVGAEEMNGRQVNVRNRDDPATQDRGQPIA 777

Query: 634 LLDAIPILTK 643
           L +A+  L K
Sbjct: 778 LEEALEKLAK 787


>gi|221480967|gb|EEE19381.1| threonyl-tRNA synthetase, putative [Toxoplasma gondii GT1]
 gi|221501688|gb|EEE27452.1| threonyl-tRNA synthetase, putative [Toxoplasma gondii VEG]
          Length = 844

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 230/646 (35%), Positives = 351/646 (54%), Gaps = 65/646 (10%)

Query: 49  DLSDPVREGS--IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYY 106
           D+  P+ EGS  ++++  +   +  V  HS AHI+ +A+++ +   Q+ +GP + +GFYY
Sbjct: 201 DMKRPL-EGSCRLQLLKFDSDEAKHVFWHSSAHILGQAIEATF-GAQLTVGPALTNGFYY 258

Query: 107 D-FDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES- 164
           D +  +   + +   ++E     +I  D  F +   S  +A ELF      +KV+++ S 
Sbjct: 259 DAYMGDAKVTEESYGRLEAAAAAVIKEDQAFRRLVCSKAEALELFADN--PFKVQLIASK 316

Query: 165 IPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTA 224
           IP     T+Y  G   DLCRGPH+ STG+VK F ++ K + +YW G  +   L R+YG +
Sbjct: 317 IPEHGLTTVYCCGSLVDLCRGPHIPSTGKVKAF-QVTKHSASYWLGRQHLDSLQRVYGVS 375

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM 283
           +  ++ L  YL  LEE++KRDHR L + + LF    + S G  FW   G K++  L  +M
Sbjct: 376 FPDKKLLKDYLKLLEEAKKRDHRVLGQNLHLFFFDTNVSPGSCFWLPDGAKVYNKLCMFM 435

Query: 284 RRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
           R + +   ++E+ +P +    LW+ SGH+ +Y+ NM+          + + + LKPMNCP
Sbjct: 436 REEYRFRGFQEVISPNIFSCDLWKVSGHYQNYKENMYLFDV------EGKEWGLKPMNCP 489

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN 402
           GH  +F H   SYR+LP+RLA+FG ++RNE SGSL GL RVR F QDDAH+FC  +Q+  
Sbjct: 490 GHCIMFKHLAPSYRQLPLRLADFGVLHRNELSGSLTGLTRVRRFQQDDAHIFCRLDQVKE 549

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
           E     N +  +Y  FGF    + LSTRP+K +G  A+WD AE  +K  L+      Q  
Sbjct: 550 EVADALNFLFFVYDQFGF-SFELFLSTRPKKALGERAVWDSAEAALKAALEETGRPWQ-- 606

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV----------- 511
           +N     G+GAFYGPK +  L DA+ R  QCGTIQ+DF LP RFN  Y            
Sbjct: 607 LNP----GDGAFYGPKIDIRLWDALKRPHQCGTIQLDFQLPIRFNLQYRTQDEAVAGARD 662

Query: 512 --------------NSHSEK---------------CHPVMIHRAVFGSIERFIGIMIENF 542
                         + H +K                 PV+IHRA+ GSIER   ++IE+ 
Sbjct: 663 KAKEDKETGEKRTDSEHEQKEEEAFGVELPLRPGMARPVIIHRAILGSIERMCAVVIEHT 722

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G LP WLSP Q IV  I+    +YA  + ++L S    +  D  N T+N KIRE  +++
Sbjct: 723 GGKLPFWLSPKQCIVLPISDKVNDYAASVRDVLHSCGYEVGLDVSNNTVNKKIREAQLQQ 782

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKV-SLLDAIPILTKESLP 647
              +++ G+KE +++++ +R       QKV S+ D + +  K+ +P
Sbjct: 783 WNYLLVVGEKERADKTVTVRDRADPEHQKVLSMEDLLTLFEKQGMP 828


>gi|168070814|ref|XP_001786949.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162660100|gb|EDQ48237.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 375

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 177/388 (45%), Positives = 266/388 (68%), Gaps = 14/388 (3%)

Query: 216 MLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKI 275
           ML RIYGTA+  + +L ++L+ LEE++KRDHRKL +E++LF  +E+  G+ F+  KG  +
Sbjct: 1   MLQRIYGTAFPNKAQLDEHLHMLEEAKKRDHRKLGKELELFMFSEEAPGMPFYLPKGMTV 60

Query: 276 FQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
              L  + R  ++++ Y+E+ TP +++  LW+QSGHW+ Y+ NM+  +  D       TF
Sbjct: 61  RTELEQFSRELQLQEGYQEVRTPLMMNNRLWEQSGHWEHYKDNMYFSEVDD------ATF 114

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           ALKPMNCPGH+ +F + L SYRELP+R+ EFG V+R+E SG+L+G+MRVR F QDDAH++
Sbjct: 115 ALKPMNCPGHMLIFKNTLHSYRELPIRMMEFGQVHRHEFSGALNGMMRVRTFCQDDAHLY 174

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDT 454
              EQ+ +E  +  +LI  +Y  FGFE   ++LSTRPE  +GS+ LWD AE  ++ VLD 
Sbjct: 175 VMPEQIEDEINQAISLIGRMYDIFGFE-YKIELSTRPEDSMGSEELWDQAERALQNVLD- 232

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH 514
            +   Q RIN G    +GAFYGPK ++ + DA+ R WQCGTIQ+DF +P +F+  Y+   
Sbjct: 233 -RRGVQYRINEG----DGAFYGPKIDFHILDALKRSWQCGTIQLDFQMPEKFDLTYIGED 287

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANL 574
           S K  PV+IHRA++GSI+RFIGI+ E++ G  PLWL+P+Q  +  ++    +YA ++ + 
Sbjct: 288 SLKHRPVVIHRAIYGSIDRFIGILTEHYAGAFPLWLAPVQVKLLPVSDHYADYALQVQSQ 347

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKK 602
           L++  + +ETD R+E + YKIRE  ++K
Sbjct: 348 LRAAGIRVETDLRSEKLGYKIREAQMEK 375


>gi|330723715|gb|AEC46085.1| threonyl-tRNA synthetase [Mycoplasma hyorhinis MCLD]
          Length = 581

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 209/588 (35%), Positives = 331/588 (56%), Gaps = 41/588 (6%)

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIAR 132
           + HS +H++A AV  ++P+VQ+  GP  ++GFYYDF    P S  +L +IEK MQ++ A 
Sbjct: 8   LNHSASHLLALAVIKLFPDVQLGFGPATDEGFYYDFKFVNPLSEHDLIKIEKMMQKL-AN 66

Query: 133 DSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKE-NVTLYR-----QGEWF--DLCR 184
           ++  +KQ L  +      +  K+ +K E+L+   ++   +T +      + E+   DLC 
Sbjct: 67  NNFVMKQTLGTQ-----IDFSKQIFKKELLDKFTSENRKITFFSIVNPTKNEYLFEDLCA 121

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           G H+ +  Q+K F KL+ +AGAYWRG      L+RIYGTAW+T++EL ++L+ L+E ++R
Sbjct: 122 GGHIENMKQIKHF-KLLSIAGAYWRGKVENEQLTRIYGTAWDTKEELEEFLHILQERKER 180

Query: 245 DHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRRKI-----KDDYEEINTPQ 298
           DHRKL +E+ LF   +  G G   W   G KI    ++ ++ KI     K  ++E+ TP 
Sbjct: 181 DHRKLGKELKLFTFNKLFGQGFPIWLEDGMKI----VNKIKEKILFYDKKYGFKEVFTPH 236

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
             +Q L++ SGH+  Y+ +MF     +           +PM CP H+ +F+   KSYREL
Sbjct: 237 FGEQKLYEISGHFAHYKEDMFGALVVEG-----ENLIPRPMTCPHHIILFDTFKKSYREL 291

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P R++E   +YR E SG+L GL RVR     + H+F  K Q+ +E   ++ +I  + K F
Sbjct: 292 PYRISEQSRLYRYEKSGALTGLERVRSMLLTEGHIFVAKTQIVDEFKHLYQMISEVLKFF 351

Query: 419 GFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
             E   V  S R     EK    D +W+ AE+ ++ VL  +    Q++I      GE AF
Sbjct: 352 KIEVNYVSFSKRDPENKEKFFDDDQMWNQAESDLEKVLKELGVEYQEKI------GEAAF 405

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK ++ +K  +  +    T+Q+DF LP +F+  ++N  + K  P++IHR + G+ ERF
Sbjct: 406 YGPKIDFQIKTVLNHEITISTLQLDFLLPKKFDISFINQDNAKETPILIHRGLIGTYERF 465

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINY 593
           + I++E  KG LP WLSP Q +V  I +S   ++A EIA  L+  + ++  D RNE IN 
Sbjct: 466 VSILLEQTKGILPFWLSPKQFVVIPIENSKHSDFALEIAKKLEELNFNVTVDDRNERINK 525

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           KIRE  ++K    II GD+E   ++I  R +G   +  ++  D I  +
Sbjct: 526 KIREAQMQKTKFQIIVGDQEVENKNITYREYGQQNSNTLNFEDLIKFI 573


>gi|195035423|ref|XP_001989177.1| GH11579 [Drosophila grimshawi]
 gi|193905177|gb|EDW04044.1| GH11579 [Drosophila grimshawi]
          Length = 493

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 196/493 (39%), Positives = 287/493 (58%), Gaps = 16/493 (3%)

Query: 153 KKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDS 212
           K   +KV IL      +  T+Y+ G   DLCRGPHVR TG+VK   K+ K +  YW G +
Sbjct: 3   KYNEFKVRILNEKVTTDRTTVYKCGSLIDLCRGPHVRHTGKVKAL-KITKNSSTYWEGKA 61

Query: 213 NRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKG 272
           +   L R+YG ++   ++L ++    EE+ KRDHRK+ RE +LF   E   G  F+  +G
Sbjct: 62  DAESLQRVYGISFPDPKQLKEWEKLQEEAAKRDHRKIGREQELFFFHELSPGSCFFQPRG 121

Query: 273 WKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
             I+ TL++ +R +  K  ++E+ +P + +  LW  SGHW  Y  NMF+ +   +     
Sbjct: 122 AHIYNTLMNLIRGEYRKRGFQEVISPNIYNAKLWMTSGHWQHYADNMFSFEAEKEK---- 177

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
             FALKPMNCPGH  +F++  +S+RELP+R+A+FG ++RNE SG+L GL RVR F QDDA
Sbjct: 178 --FALKPMNCPGHCLIFDNRNRSWRELPLRMADFGVLHRNELSGALTGLTRVRRFQQDDA 235

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
           H+FC  EQ+ +E     + +  +Y  FGF   +V LSTRPE+ +G    WD AE  +   
Sbjct: 236 HIFCAPEQIKSEMKGCLDFLRHVYTIFGFSFQLV-LSTRPEQYLGELEQWDAAEKALAES 294

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
           LD      ++        G+GAFYGPK +  + DA+ R +QC TIQ+DF LP RFN  Y+
Sbjct: 295 LDEFGMPWKEN------HGDGAFYGPKIDITIMDALKRPFQCATIQLDFQLPIRFNLNYI 348

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
               EK  PV+IHRA+ GS+ER I I+ EN+ G  P WLSP Q +V  +  +  EYA+ +
Sbjct: 349 ADDGEKKRPVIIHRAILGSVERMIAILTENYAGKWPFWLSPRQVMVVPVGPAYDEYAKSV 408

Query: 572 ANLLKSHHLSIETDF-RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
            + L +     E+D    +T+N KIR   + +   I++ GDKE S  ++ +R   +    
Sbjct: 409 RDQLYAAGFMSESDCDAGDTMNKKIRNAQLAQFNFILVVGDKERSSNTVNVRTRDNKVHG 468

Query: 631 KVSLLDAIPILTK 643
           +VS+ + I  L K
Sbjct: 469 EVSVAELISKLQK 481


>gi|256848462|ref|ZP_05553904.1| threonyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
 gi|256714729|gb|EEU29708.1| threonyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
          Length = 601

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 198/588 (33%), Positives = 325/588 (55%), Gaps = 21/588 (3%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFS 115
           G +  I  +   S A +R   A ++   +   +  +++      +D F+ D DK+ Q  S
Sbjct: 11  GEVNKIDKDSAESAAALRQMAALMLKAVLADKYDGIRLGDAVAEDDQFWVDSDKDDQQVS 70

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           +DEL  +E  ++++   D+    +++  +    L + K + +  E++        V +Y 
Sbjct: 71  ADELEGLEADIKKLAKNDAKV--EFVERDVNDALADVKNDKFSTELINDHAKNGKVAMYN 128

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
            G  + +   P +   G V K FKL+ VAGAYW+G S+ PML RIYGTA+  + +L + L
Sbjct: 129 LGNAYAVAEAP-ILVYGDVVKNFKLLSVAGAYWKGMSSNPMLQRIYGTAFYKKDDLAEDL 187

Query: 236 YFLEESEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEE 293
              +E+++RDHR +  ++DLF +  + G+G+ +W  KG  I +T+  Y+  R++ D YE 
Sbjct: 188 KKRQEAKERDHRVIGNQLDLFFVDPKVGAGLPYWLPKGAAIRRTIERYIIDREVADGYEH 247

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           + TP +++   ++ SGHW+ YR +MF        + D     L+PMNCP H+ V+ H L+
Sbjct: 248 VYTPVLMNLDAYKTSGHWEHYRDDMFPPM----DMGDGEMLELRPMNCPSHIQVYKHHLR 303

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYR+LP+R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  KI  LI+S
Sbjct: 304 SYRDLPLRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQIRSEFAKILKLIMS 363

Query: 414 IYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL 469
           +YKDF       +LS R  K V     +D +W+ +++++K  +D +       ++     
Sbjct: 364 VYKDFDITDYSFRLSLRDPKNVKKYYANDEMWEKSQSMLKQAMDDLS------LDYYEAE 417

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG 529
           GE AFYGPK +   K A+G D    TIQ+DF LP RF   YV    ++  PVMIHR V G
Sbjct: 418 GEAAFYGPKLDIQTKTALGNDETMSTIQLDFMLPERFGLTYVGKDGQEHMPVMIHRGVVG 477

Query: 530 SIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRN 588
           ++ERF+  + E +KG  P WL+P Q  +  ++     +YA ++   L++  + +  D RN
Sbjct: 478 TMERFVAYLTEIYKGAFPTWLAPEQVHIIPVSDDKHGDYADQLGAELRAAKIRVNVDHRN 537

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
           E + YKIRE   +K+P  ++ GD E +  S+ +R++G      +S  D
Sbjct: 538 EKMGYKIREAQTQKVPYTLVVGDDEMANGSVSVRKYGEKEQNSMSKQD 585


>gi|71893938|ref|YP_279384.1| threonyl-tRNA synthetase [Mycoplasma hyopneumoniae J]
 gi|71852065|gb|AAZ44673.1| threonyl-tRNA synthetase [Mycoplasma hyopneumoniae J]
          Length = 579

 Score =  371 bits (952), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 202/587 (34%), Positives = 338/587 (57%), Gaps = 41/587 (6%)

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIAR 132
           + HS +H++A A++ ++P V+  IGP+ +DGFYYDFD     S  +  +IEK M++++++
Sbjct: 9   LNHSSSHLLALAIKILYPGVKFGIGPVFDDGFYYDFDLSVSISQSDFPKIEKLMKKLVSK 68

Query: 133 DSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-ENVTLY-----RQGEWF-DLCRG 185
           +   +      E   +  + + + YK E+   +  K E +T +     +    F DLC G
Sbjct: 69  NLKIV------ETDGKNLDFQNQIYKAELKNDLEKKGEKITYFSIVDSKNNILFEDLCYG 122

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
            H+ S G+++ F KL+K+AGAYW+GDS    L+RIYGT+W++++ L ++L  L+E ++RD
Sbjct: 123 NHLESLGKIQNF-KLLKIAGAYWKGDSKNKQLTRIYGTSWDSKENLDKFLGILQERQERD 181

Query: 246 HRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD-----DYEEINTPQV 299
           HRK+  ++ LF  +   G G   W   G +I+  +    R+KI +      ++E+ TP  
Sbjct: 182 HRKIGAKLKLFTFSSYFGHGFPVWLENGMRIYNKI----RQKILEFDRNYGFKEVLTPHF 237

Query: 300 LDQHLWQQSGHWDSYRANMF-AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
             + L++ SGH   YR +MF  +K  ++ +        +PM CP H+ +F+  L SYR L
Sbjct: 238 GHKELYKISGHLLHYRDDMFKGLKIENEEL------IPRPMTCPHHIILFSQQLFSYRNL 291

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P R++E   +YR E SG+L GL RVR     + H+F +K Q+F+E   +  +I  +   F
Sbjct: 292 PYRISEQSRLYRYEKSGALLGLERVRAMDLTEGHIFVSKSQIFSEISHLFQMISEVLDFF 351

Query: 419 GFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
             +   +  S R     +K    D +W+ AE  +K  LD      Q++IN    +GE AF
Sbjct: 352 KVQIFYISFSKRDPKNKDKFFQDDQMWEQAEADLKQFLD------QNKINYIEKIGEAAF 405

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK ++ +K A+ ++    T+Q+DF LP +F   ++N +++K  P++IHR + G+ ERF
Sbjct: 406 YGPKIDFQVKTALNKELTISTLQLDFLLPEKFKISFINEYNKKETPILIHRGLIGTYERF 465

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
           I +++E  KGNLP W+SP Q IV  +     ++AQ+I  +L     + E D R+E I+ K
Sbjct: 466 IALLLEQSKGNLPFWISPKQIIVIPVAEKHNDFAQKIHKILFDLGFNSEIDLRSERISRK 525

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           IRE +++KI   +I GD+E ++  I  R+FGS    ++SL+D + +L
Sbjct: 526 IREANLEKINFQVIIGDEEITKNEITYRKFGSPELFRISLVDFVDLL 572


>gi|148671336|gb|EDL03283.1| threonyl-tRNA synthetase, isoform CRA_a [Mus musculus]
          Length = 544

 Score =  370 bits (950), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 201/500 (40%), Positives = 291/500 (58%), Gaps = 21/500 (4%)

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGP 186
           ++II     F +  +  E   E+F+  K  +K  IL         T+YR G   DLCRGP
Sbjct: 28  KKIIKEKQTFERLEVKKETLLEMFKYNK--FKCRILNEKVNTPTTTVYRCGPLIDLCRGP 85

Query: 187 HVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDH 246
           HVR TG++K   K+ K +  YW G ++   L RIYG ++   + L ++  F EE++ RDH
Sbjct: 86  HVRHTGKIKTL-KIHKNSSTYWEGKADMETLQRIYGISFPDPKLLKEWEKFQEEAKNRDH 144

Query: 247 RKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLW 305
           RK+ R+ +L+   E   G  F+  KG  I+ TL+ ++R +  K  ++E+ TP + +  LW
Sbjct: 145 RKIGRDQELYFFHELSPGSCFFLPKGAYIYNTLMEFIRSEYRKRGFQEVVTPNIFNSRLW 204

Query: 306 QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEF 365
             SGHW  Y  NMF+ +   +       FALKPMNCPGH  +F+H  +S+RELP+RLA+F
Sbjct: 205 MTSGHWQHYSENMFSFEVEKEQ------FALKPMNCPGHCLMFDHRPRSWRELPLRLADF 258

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
           G ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E     + + ++Y  FGF    +
Sbjct: 259 GVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSVFGFS-FKL 317

Query: 426 KLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKD 485
            LSTRPEK +G   +W+ AE  ++  L+      +  +N     G+GAFYGPK +  +KD
Sbjct: 318 NLSTRPEKFLGDIEIWNQAEKQLENSLNEFGEKWE--LNP----GDGAFYGPKIDIQIKD 371

Query: 486 AIGRDWQCGTIQVDFNLPSRFNAFYVNSH--SEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           AIGR  QC TIQ+DF LP RFN  YV SH   +K  PV++HRA+ GS+ER I I+ EN+ 
Sbjct: 372 AIGRYHQCATIQLDFQLPIRFNLTYV-SHDGDDKKRPVIVHRAILGSVERMIAILTENYG 430

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIREHSIKK 602
           G  P WLSP Q +V  +  +  EYAQ++           +TD     T+N KIR   + +
Sbjct: 431 GKWPFWLSPRQVMVVPVGPTCDEYAQKVRQQFHDAKFMADTDLDPGCTLNKKIRNAQLAQ 490

Query: 603 IPIIIICGDKEASERSIGIR 622
              I++ G+KE +  ++ IR
Sbjct: 491 YNFILVVGEKEKASGTVNIR 510


>gi|326476791|gb|EGE00801.1| threonyl-tRNA synthetase [Trichophyton tonsurans CBS 112818]
          Length = 753

 Score =  369 bits (947), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 223/661 (33%), Positives = 342/661 (51%), Gaps = 68/661 (10%)

Query: 20  HATGSDVAESISRSLAKKAVAVAINGK-VCDLSDPV-REGSIEIITPEDPRSLAVIRHSC 77
           H+T     + I + L+   V   ++GK + DL  P+ R+  I  +  +      V  HS 
Sbjct: 101 HSTPGSFLKDIPKELSSSVVIAKLDGKELWDLDRPLERDCRIRYLPFDSVEGREVFWHSS 160

Query: 78  AHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQP--FSSDELAQIEKKMQEIIARDSP 135
           AH + EA +  +    ++ GP    GF+YD    +    +  +   ++ K  +I      
Sbjct: 161 AHALGEACECQY-GCLLSHGPPTAQGFFYDMAIPEGGVVTQADYPLLDAKTAKIFKEKQS 219

Query: 136 FLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVK 195
           F +  +S E  +++F   K  YK+  ++++   E+ T+YR G   DL          Q+K
Sbjct: 220 FDRLEVSKENLKKMFGYSK--YKLHYIDNLVEGESSTVYRCGTLVDL----------QIK 267

Query: 196 KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDL 255
              K+ + + AY+ GD     L RI G A+  ++ L ++L FLEE+EKR+H K+ +E +L
Sbjct: 268 AM-KITQNSSAYFLGDQTNDALQRIRGVAFPDKKLLQEHLKFLEEAEKRNHLKIGKEQEL 326

Query: 256 FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSY 314
           F   E   G  F    G KIF  L   +R +  K  Y+E+ +P + D  +W+QSGHW  Y
Sbjct: 327 FFFDEVSPGCPFLLPNGTKIFNALQKLLRTEYRKRGYQEVQSPNMYDVGIWRQSGHWAHY 386

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
           + +MF +        + R +ALKPMNCPGH  +F H  +SYRELP+R+A+FG ++RNE S
Sbjct: 387 KDDMFKLDV------EKRDWALKPMNCPGHCIMFGHRERSYRELPLRMADFGVLHRNEAS 440

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
           G+LHGL RVR F QDD H+FCT  Q+  E   + + + +IY  FGF    +KLSTRPEK 
Sbjct: 441 GALHGLTRVRKFQQDDTHIFCTDNQIMEEIEGLFDFLRAIYGLFGF-SFKLKLSTRPEKY 499

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           +G    WD AE  ++  L   K +  +     +  G+GAFYGPK +  + DA+ R+ QC 
Sbjct: 500 LGKLETWDFAEAQLREALTKFKGADWE-----IDEGDGAFYGPKIDITISDALKREHQCA 554

Query: 495 TIQVDFNLPSRFNAFYV------------NSHSE-----------------------KCH 519
           TIQ+D+ LP  F   Y+            N  +E                       +  
Sbjct: 555 TIQLDYQLPLNFKLEYMTGETIPKSAAPANPKAEAKPEGDSNPTQAQPSDSSTPGPGRAR 614

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH 579
           PV+IHRA+ GS ERF GI+IE+F G  P WLSP Q ++  + +SA +Y +E+  +L+   
Sbjct: 615 PVVIHRAIIGSFERFFGILIEHFGGKWPFWLSPRQILIVPVMASANDYVEELQEILRGDK 674

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
           L+++ D    T+  KIR   + +   I + G +E   RS+ IR     ++Q    L  IP
Sbjct: 675 LNVDIDLSGHTMQKKIRNGQLAQYNFIFVVGAQEKESRSVNIRNRDDPSSQTKGSL--IP 732

Query: 640 I 640
           +
Sbjct: 733 L 733


>gi|224002114|ref|XP_002290729.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220974151|gb|EED92481.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 791

 Score =  369 bits (947), Expect = e-99,   Method: Compositional matrix adjust.
 Identities = 222/684 (32%), Positives = 351/684 (51%), Gaps = 77/684 (11%)

Query: 1   MPSDIKLTFPDG--------SIKNFPVHATGSDVAESISRSLAKKAVAVAIN-------- 44
           +P DI++T PDG         +K      T  DVA +I+R LA       +         
Sbjct: 96  VPVDIEVTLPDGKVLSEDKEGVKYQAWRTTPFDVAATIARGLADNTSVARVTYTAYVSDY 155

Query: 45  -------GKVCDLSDPVRE------------------------GSIEIIT----PEDPRS 69
                  G V  L++ + E                        GS+  +      +D  +
Sbjct: 156 NPEEDGMGGVDTLAESMAELEINDADEDKSKLTMLWDMTRPLVGSVSKMEFLKFEDDVDA 215

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF-----DKEQPFSSDELAQIEK 124
             V  HS AH+M EA++ ++   ++ IGP +  GFYYD        +     ++   +E 
Sbjct: 216 RTVFWHSSAHVMGEALERLYGS-RLTIGPPLAGGFYYDSYMGDSSSDGALKEEDYKPVEA 274

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES-IPAKENVTLYRQGEWFDLC 183
           ++Q+I+     F +  ++ E+A ++F      +K +I+ + I      T+YR G+  DLC
Sbjct: 275 EVQKIVKSKQKFERLVVTKEEALDMFAGN--PFKEQIISTKIADGSRTTVYRCGDLVDLC 332

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +TG++K F    + +   W GD++   L R+YG ++  ++ L  +    E++++
Sbjct: 333 RGPHVPNTGRIKAF-AATRHSATNWLGDTDNDSLQRMYGISFPDKKMLKVWQENQEKAKE 391

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQ 302
           RDHR++A++ DL    E  +G  FW   G +I+  LI +++    +  Y+EI TP + + 
Sbjct: 392 RDHRRIAQQQDLVMFHELSAGSAFWLPHGARIYNKLIEFIKEHYWRRGYDEIITPNIYNL 451

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW QSGH   Y+  MF   C D   K+   +A+KPMNCPGH  +F   ++SYR+LP+R 
Sbjct: 452 DLWHQSGHAMHYKDAMF---CFDVEGKE---WAMKPMNCPGHCLMFAGKIRSYRDLPIRF 505

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           A+FG ++RNE SG+L GL RVR F QDDAH++C ++Q+ +E L   + + S+Y  FG   
Sbjct: 506 ADFGVLHRNELSGALSGLTRVRRFQQDDAHIYCREDQIEDEVLGALDFMKSVYDTFGM-T 564

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             ++LSTRP K +G   LWD AE  +   +DT       R N     G+GAFYGPK +  
Sbjct: 565 YKLELSTRPAKALGDKELWDRAEAALARAMDTFAGKGGWRENP----GDGAFYGPKIDIK 620

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK----CHPVMIHRAVFGSIERFIGIM 538
           + DA+ R  QC T+Q+DF LP RF   Y     EK      PVM+HRA+ GS+ER   ++
Sbjct: 621 VMDAMERVHQCATVQLDFQLPIRFGLEYNTGSKEKGSEFARPVMVHRAMLGSVERMFAVL 680

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
            E++ G  PLWLSP Q +V  I     +Y+Q + + L +     + D    T   K+R  
Sbjct: 681 CEHYGGKWPLWLSPRQVMVVPIHKDWNDYSQGVRDKLHAEGFYADVDLSKATFQKKVRNA 740

Query: 599 SIKKIPIIIICGDKEASERSIGIR 622
            +++    ++ G+ E    ++ IR
Sbjct: 741 QVEQYNFQLVVGEAEVKNDTVNIR 764


>gi|322502963|emb|CBZ38047.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 788

 Score =  369 bits (946), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 231/745 (31%), Positives = 368/745 (49%), Gaps = 115/745 (15%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGS-DVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGS 58
           M + IK++ PDG + +     T   D+A+ +S SL  K +   +N  + DL+ P   +  
Sbjct: 44  MKAPIKVSLPDGKVMDAESWVTCPLDIAKRLSNSLPDKVIVARVNEALWDLTRPFEADCQ 103

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSD 117
           +E++  +D  +  V  HS +H++  A++ I+ + ++++GP +E+G F+Y+    +P S  
Sbjct: 104 LELLDWDDKDAREVFWHSSSHVLGYALERIF-DTKLSVGPALEEGGFFYEGLTNRPVSES 162

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES-IPAKENVTLYRQ 176
           +   IE  MQE++ +  P+ +  +S E A  LF   +  +K +IL S +P   + T+YR 
Sbjct: 163 DYKAIESAMQELVKQKMPYQRLEVSKEDALRLFGYTE--FKSKILASKVPDGGSCTVYRC 220

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           G   D CRGPH+  TG+VK F  + K + +Y+ G +   +L R+YG ++     LT++  
Sbjct: 221 GMLIDPCRGPHLPDTGRVKAF-AVTKNSSSYFEGKAENEVLQRVYGISFPKNPMLTEWKT 279

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
             EE+ KRDHR + R+ +LF+  E   G  FW   G +I+ TL+ ++R+K +   ++E+ 
Sbjct: 280 IQEEAAKRDHRVIGRQQNLFNFHEVSPGSAFWLPHGTRIYNTLVEFLRKKYRRCGFQEVI 339

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           +P +    LW  SGHW+ Y  NMF  KC  +       F LKPMNCPGH  +F     SY
Sbjct: 340 SPNMYSSKLWMVSGHWEKYADNMFCTKCEKED------FGLKPMNCPGHCIMFASQPHSY 393

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           +ELP+R A+FG ++RNE SG+L GL RVR F QDDAH+FC  +Q+ +E       +  +Y
Sbjct: 394 KELPIRYADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCRMDQITDEMEGQMQFLSDVY 453

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTI-------------------- 455
              GF K     STRP  ++GSDALWD +E+ ++  L+                      
Sbjct: 454 GVLGF-KFYFYHSTRPANKLGSDALWDQSESYLRTALNRFCGIPEELPDPLHPDQRFHYD 512

Query: 456 ---------------------KNSSQDRINTG----VLLGEGAFYGPKFEYILKDAIGRD 490
                                 N+ +   N G       G+GAFYGPK + +++DA+ R 
Sbjct: 513 GKPDSVKKMKALMKKAERCEDPNAWKGPTNGGDGWIENAGDGAFYGPKIDIVVEDALRRR 572

Query: 491 WQCGTIQVDFNLPSRFNAFYVNSHSEK-------------CHPVM----------IHRAV 527
            QC TIQ+DFNLPSRF   Y    +EK               P +          + +  
Sbjct: 573 HQCATIQLDFNLPSRFGLKYTLPAAEKDETTVSPTEKQKHADPALTASSPAVEDCVSKPK 632

Query: 528 FGSIE---RFIGI----------------------------MIENFKGNLPLWLSPIQAI 556
            G+ E   R +GI                            + E+F G+ P WLSP Q +
Sbjct: 633 PGTYEAAVRDLGIDLELDANQARPVMIHRAILGSLERSIAILCEHFGGDWPFWLSPRQVM 692

Query: 557 VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASE 616
           V  +++S  EY+Q++ + +       + D    T++ KIR     +   I++ G KE   
Sbjct: 693 VVPVSASNYEYSQQVRDTMHDAGFHADVDNGAATLDKKIRNAEKARYNFILVVGQKEQDA 752

Query: 617 RSIGIRRFGSTTTQKVSLLDAIPIL 641
            ++ IR  G       SL++A+  L
Sbjct: 753 TAVNIRARGEKRLGNKSLVEAVQWL 777


>gi|315123806|ref|YP_004065810.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|315017528|gb|ADT65621.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
          Length = 457

 Score =  369 bits (946), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 190/468 (40%), Positives = 289/468 (61%), Gaps = 19/468 (4%)

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           +CRGPHV +T +  +FFKL +VAGAY  GD  R ML+RIYGTA+  ++ L +YL  +EE+
Sbjct: 1   MCRGPHVPNT-KFLRFFKLTRVAGAYLGGDEKREMLTRIYGTAFADKESLKEYLTIIEEA 59

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEINTPQ 298
           +KRDHRKL  E+ LF   ++ G G+  W   G ++ ++ + +M  KI     YE +  P+
Sbjct: 60  KKRDHRKLGTELKLFTFDDEIGGGLPIWLSNGARL-RSKLEHMLYKIHRLRGYEPVRGPE 118

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L    W+ SGH+ +Y+ NM+  +       D + + +KPMNC GH+ ++   ++SYR+L
Sbjct: 119 LLKADAWKISGHYANYKENMYFTQI------DEQEYGIKPMNCVGHIKIYQSDVRSYRDL 172

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P++  E+G V+R+E SG LHGL RVR FTQDDAH+FC   Q+  + L+I   + ++ K F
Sbjct: 173 PLKFFEYGVVHRHEKSGVLHGLFRVREFTQDDAHIFCMPSQIKEQVLEILAFVDNLMKLF 232

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
            F   M ++ST+PEK +G D +W+ A   +K  L+      +  +  G+  G GAFYGPK
Sbjct: 233 DFSYEM-EISTKPEKAIGDDEIWEIATKALKEALN------EQGLKYGIDEGGGAFYGPK 285

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +  + DA+ R WQCGT+QVDFNLPSRF   Y +S +EK  PVM+HRA+ GS ERFIGI+
Sbjct: 286 IDIKITDALKRKWQCGTVQVDFNLPSRFKLEYTDSDNEKKQPVMLHRAILGSFERFIGIL 345

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
            E+  G  P +++P    +  I  + + YA+EI   L   ++  E   +NE+++ KIR  
Sbjct: 346 TEHCAGEFPFFIAPTAVGIVPIGEAHIAYAKEIQKELLELNIDSEVYEKNESLSKKIRIA 405

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
             +K+P+I++ GD E  +RS+ +R   +   + +S LD    L KE +
Sbjct: 406 EKQKLPMILVLGDDEVVKRSVALRDRRAKEQKNLS-LDEFIKLVKEKM 452


>gi|316976611|gb|EFV59868.1| threonyl-tRNA synthetase, cytoplasmic [Trichinella spiralis]
          Length = 1190

 Score =  368 bits (945), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 215/635 (33%), Positives = 336/635 (52%), Gaps = 47/635 (7%)

Query: 5   IKLTFPDGS-IKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
           I +T PDG  ++      +  D+   ++  +  + +   ++G + DL  P+ +  +++ +
Sbjct: 58  ITVTLPDGKEVEAMAWRTSPLDIMTKLN--MGGRPIVSKVDGVLWDLERPLEKSCNLQFL 115

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQ 121
             +D     V  HS AH++ EA + ++    +  GP IE+GFYYD F  ++  +++++ +
Sbjct: 116 LFDDDEGKQVFWHSTAHVLGEAAERLFG-CCLCYGPPIENGFYYDMFMDDRTVTAEDMDK 174

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           + K M+  I    PF +  L  E+  E+F  K   +K+ ILE+       T YR G   D
Sbjct: 175 LAKIMKAAIDGKQPFERLELKKEELMEMF--KYNPFKLRILENKVKTPTTTAYRCGPLID 232

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHVR TG +  F K+ K +  +W GDS+   L R+YG ++   ++L  +    EE+
Sbjct: 233 LCRGPHVRHTGLLNSF-KITKNSSTFWEGDSSMESLQRVYGVSFPNSKQLKLWEKMREEA 291

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVL 300
             RDHRKL R+ +LF   E   G  F+  +G  I+ TL+ ++R++  K  + E+ TP + 
Sbjct: 292 ASRDHRKLGRQQELFIFHELSPGSAFFFPRGAYIYNTLVEFLRKQYRKRGFREVITPNIY 351

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  LW+ SGHW  Y  NMF ++   +       F LKPMNCPGH  +             
Sbjct: 352 NSRLWETSGHWQHYAKNMFKIEIEKEL------FGLKPMNCPGHCLI------------- 392

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
                     NE SG+L GL RVR F QDDAH+FC ++Q+ +E     + +  +Y+  GF
Sbjct: 393 ----------NELSGALSGLTRVRRFQQDDAHIFCRQDQIASEIEGCLDFLRFVYETLGF 442

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
             + + LSTRP+  +G    WD+AE  ++  L+  K      +   +  G+GAFYGPK +
Sbjct: 443 S-MKLYLSTRPDDFMGDVKTWDEAEAQLQCALEKFK------LPWTLNAGDGAFYGPKID 495

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
            I+ DA+ R  QC TIQ+DF LP RF+  YV+ +  K  PV+IHRAV GSIER I ++ E
Sbjct: 496 IIVLDAMQRQHQCATIQLDFQLPVRFDLHYVDENHVKQRPVIIHRAVLGSIERMIAVLTE 555

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF-RNETINYKIREHS 599
           NF G  P WLSP QA+V  +     +YA ++   +       + D   ++T+  KIR   
Sbjct: 556 NFAGKWPFWLSPRQAMVIPVHPEFDDYALQVQQKIFDAGFECDVDVDASDTMKKKIRNAQ 615

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           + K   I++ G KE    S+ IR   +    + SL
Sbjct: 616 LGKWNFILVVGAKEKENSSVNIRTRDNAVLGEYSL 650


>gi|71655606|ref|XP_816364.1| threonyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener]
 gi|70881486|gb|EAN94513.1| threonyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 817

 Score =  367 bits (942), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 225/742 (30%), Positives = 362/742 (48%), Gaps = 134/742 (18%)

Query: 1   MPSDIKLTFPDGSIKNFPVHA---TGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG 57
           M + I +T PDG  K  P  +   T  D+A+ +S S A++ +   +N ++ DL+  V EG
Sbjct: 60  MQAPITITLPDG--KQLPATSWLTTPIDIAKRLSNSQAERVIVARVNDELWDLTR-VFEG 116

Query: 58  --SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPF 114
             ++E++  +DP +  V  HS +H++  A++ ++   ++++GP +E+G F+Y+ D  +P 
Sbjct: 117 DATLELLDWDDPEARHVFWHSSSHVLGYALERVF-HTRLSVGPALEEGGFFYEGDTGRPL 175

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES-IPAKENVTL 173
           S  +   IE  MQE++    P+  Q L+  KA  L       +K +IL S +P     T+
Sbjct: 176 SETDYKSIEIAMQELVKMKMPY--QRLTVSKADALLLFGYTEFKSKILASKVPENGFCTV 233

Query: 174 YRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQ 233
           YR G   D CRGPH+  TG+VK F  + K + +Y+ G +   +L R+YG ++  Q  LT+
Sbjct: 234 YRCGHLIDPCRGPHLPDTGRVKAF-AVTKNSSSYFEGKAENAVLQRVYGISFPKQTMLTE 292

Query: 234 YLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYE 292
           +     E+ +RDHR + R+  LF   E   G  FW   G +I+  L+ + R++ +   +E
Sbjct: 293 WKALQAEAARRDHRNIGRQQQLFGFHEVSPGSAFWLPHGARIYNALVEFQRKQYRRRGFE 352

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+ +P +    LW  SGHWD Y  NMF +      + +     +KPMNCPGH  ++    
Sbjct: 353 EVVSPNMFSSKLWMVSGHWDKYADNMFRI------VVEKEDHGMKPMNCPGHCIMYAMQQ 406

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
            SY+ELP+R A+FG ++RNE SG+L GL RVR F QDDAH+FC  +Q+  E       + 
Sbjct: 407 HSYKELPIRYADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCRMDQVQEEIQGALVFLD 466

Query: 413 SIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDT------------------ 454
            +Y+  GF K  +K +TRPE ++G++ +WD AE  ++  L++                  
Sbjct: 467 DVYRTLGF-KFFLKHATRPENKLGTEEMWDQAEAYLRAALNSFCGIPEHLPDPFKEGATF 525

Query: 455 ---------------IKNSSQDRINTGVL---------------------LGEGAFYGPK 478
                          +K  + +R N                          G+GAFYGPK
Sbjct: 526 TFDGRRDSVKKLRALLKKQAANRENKDTEKKEEKDDEWKGPTHADAWEENTGDGAFYGPK 585

Query: 479 FEYILKDAIGRDWQCGTIQVDFN----------LPS------------------------ 504
            + +++DA+ R  QC T+Q+DFN          LP+                        
Sbjct: 586 IDIVVEDALRRRHQCATVQLDFNLPQRFGLKYTLPTSTVEGGAGAEAKEHHADPNAPKVG 645

Query: 505 --------------RFNAFYVNSHSEKC----------HPVMIHRAVFGSIERFIGIMIE 540
                          F + Y  +  E C           PVMIHRA+FGS+ER I I+ E
Sbjct: 646 TDATTAEGKPEAEDEFLSSYEKAAKELCIDRRLDANQARPVMIHRAIFGSLERCIAILCE 705

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           ++ G  PLWLSP Q IV  +++    YA ++ +   +     + D  N T++ KIR   +
Sbjct: 706 HYGGEWPLWLSPRQVIVIPVSAENTAYATKVRDAFYADGFHADVDSGNATLDKKIRNAEV 765

Query: 601 KKIPIIIICGDKEASERSIGIR 622
            +   I + G  E   +++ +R
Sbjct: 766 ARYNFIFVVGQVEEETQTVNVR 787


>gi|289642063|ref|ZP_06474216.1| threonyl-tRNA synthetase [Frankia symbiont of Datisca glomerata]
 gi|289508136|gb|EFD29082.1| threonyl-tRNA synthetase [Frankia symbiont of Datisca glomerata]
          Length = 610

 Score =  366 bits (940), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 201/576 (34%), Positives = 312/576 (54%), Gaps = 32/576 (5%)

Query: 69  SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQE 128
           +L   RHS AH++A AV   +P+ ++ +GP   DGFYYDF   +P + ++LA ++++++ 
Sbjct: 15  TLYAKRHSVAHLLAHAVLEKFPDAKLGVGPPTRDGFYYDFALPRPLTPEDLAGLQERVRA 74

Query: 129 IIARDSPFLKQYLSHEKARELFESKKEAYKVEIL------------ESIPAKENVTLYRQ 176
           +I     F +  L+ ++A   F    +  K+E++            E I     +++Y  
Sbjct: 75  LIRDGVRFERHELTTDEAVTRF--ADQPLKLELIRDIVAGGVDDNGEPIEGPVELSVYES 132

Query: 177 GEWFDLCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
           G++ DLCRGPH+  +  +      L++V+GAYWRGD  R  L RIYGT  ++ +EL  YL
Sbjct: 133 GDFEDLCRGPHIEDSSAIHPDAVALLRVSGAYWRGDEKRQQLQRIYGTVMDSPKELRHYL 192

Query: 236 YFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEE 293
           + LEE++KRDHR +   +DLF  +   G G+  W   G  +   L ++ R  +    Y+ 
Sbjct: 193 WQLEEAKKRDHRVIGEALDLFAFSPAVGKGLPLWLPNGTIVRDELETWAREVERAHGYQR 252

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           I TP +    L+  SGH   Y  ++++    D        + LKPMNCP H  V+    +
Sbjct: 253 IVTPHITKSDLYYISGHLPYYADDLYSPIDIDG-----EEYYLKPMNCPHHHMVYKARPR 307

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYRELP+RLAE+G+VYR E SG L G+MRVRGF+Q+DAH++CT+EQ  +E L +  L   
Sbjct: 308 SYRELPLRLAEYGTVYRYERSGQLFGMMRVRGFSQNDAHIYCTREQAIDEFLAVMRLHAL 367

Query: 414 IYKDFGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL 469
            Y   G E   + L+ R     EK  G + +W +AE I +   D ++ S    I     +
Sbjct: 368 YYDKLGIEDYHMVLALRDPKNTEKYHGDELMWQEAERITR---DAMEQSGIPYIED---I 421

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG 529
           G  A YGPK +++L    GR++   T QVD  +P +F   + N H E    V++HRA  G
Sbjct: 422 GGAAHYGPKVDFVLTSVTGREFAASTNQVDLYMPEQFGLTFTNRHGEAEQAVVLHRAPLG 481

Query: 530 SIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE 589
           S ERF+  +IE+F G  P+WL+P+Q  V  I+    + A  +   L    +  E D  + 
Sbjct: 482 SHERFVAFLIEHFAGAFPVWLAPVQVRVVPISDRQADGAAAVWRRLVDAGIRAELDDSDN 541

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
           T+  KIR    +K+P + + GD+E    S+ +R  G
Sbjct: 542 TMQAKIRRAEQQKVPYVAVIGDRELENDSVSVRARG 577


>gi|308189939|ref|YP_003922870.1| threonine--tRNA ligase [Mycoplasma fermentans JER]
 gi|319777220|ref|YP_004136871.1| threonyl-tRNA synthetase [Mycoplasma fermentans M64]
 gi|238809889|dbj|BAH69679.1| hypothetical protein [Mycoplasma fermentans PG18]
 gi|307624681|gb|ADN68986.1| threonine--tRNA ligase [Mycoplasma fermentans JER]
 gi|318038295|gb|ADV34494.1| Threonyl-tRNA synthetase [Mycoplasma fermentans M64]
          Length = 582

 Score =  366 bits (940), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 204/589 (34%), Positives = 335/589 (56%), Gaps = 37/589 (6%)

Query: 72  VIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIA 131
           ++ H+ +H++  AV+ ++PEV++  GP  E+GFYYDF+ ++P S +EL++IEK M+++ +
Sbjct: 8   LLNHTTSHLLGAAVEKLYPEVKLGFGPATEEGFYYDFEFKEPLSVNELSKIEKLMKKLAS 67

Query: 132 RDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-ENVTLY-------RQGEWFDLC 183
           R+       ++ +   + ++ K + YK E+ + + A+ + +T Y       ++  + DLC
Sbjct: 68  RN------LVTIQIPEKDYDFKNKPYKKELYDELKAQGKKITFYALQDPLNKEIIFKDLC 121

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            G HV ST +V K FKL+ +AGAYWRG+S+   L+RIYGT+W+ ++EL  YL  L + ++
Sbjct: 122 AGGHVEST-KVIKNFKLLSIAGAYWRGNSDNIQLTRIYGTSWSKKEELDNYLAILADRKE 180

Query: 244 RDHRKLAREMDLFHIAED-GSGVIFWHRKGWKI---FQTLISYMRRKIKDDYEEINTPQV 299
           RDHRKL +EM +F +    G G   W   G  I    + L+  M RK    + E+ TP  
Sbjct: 181 RDHRKLGKEMKIFAMHPLCGQGFPIWLEDGMYIHNEIKNLVLKMDRKY--GFTEVLTPHF 238

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             + L++ SGH   Y+ +MFA    ++          +PM CP H+  +N   +SYR+LP
Sbjct: 239 GSEDLYKTSGHLAHYKDDMFAPLVIEN-----ERLIPRPMTCPHHIVCYNLEKRSYRDLP 293

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R +E   +YR E SG+L GL RVRG    + H+F  ++Q+  E   ++ LI    K F 
Sbjct: 294 IRYSEQSQLYRYEKSGALTGLERVRGMLLTEGHLFVREDQIEQEIKSMYQLIEETLKIFN 353

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
            +   + LS R     EK    + +W+ AE ++K  LD +       +    ++GE AFY
Sbjct: 354 IDISYISLSLRDKNDKEKYFNDNKMWNSAEKMLKKALDDMG------VKYTTVVGEAAFY 407

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +  A+G +    TIQ+DF  P  F+  Y + + ++  PVMIHR + G+ ERF+
Sbjct: 408 GPKIDIQIDTALGHEITVSTIQLDFLQPKNFDITYTDKNGKEARPVMIHRGLIGTYERFV 467

Query: 536 GIMIENFKGNLPLWLSPIQ-AIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I++E  KGNLP WL+P Q  I+    +  ++Y++ I N L + +  ++ D R+E +N K
Sbjct: 468 AILLEQTKGNLPFWLAPKQITIIPVNLNENLDYSRNIFNRLWNCNFRVKIDDRDERLNKK 527

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           IRE  + K    +I G  E  +++I  R +G   T+ V++ + I ILTK
Sbjct: 528 IREAQMSKSKYQVILGANEEKDKTISYREYGKEDTKTVTVEEFINILTK 576


>gi|259502210|ref|ZP_05745112.1| threonine-tRNA ligase [Lactobacillus antri DSM 16041]
 gi|259169828|gb|EEW54323.1| threonine-tRNA ligase [Lactobacillus antri DSM 16041]
          Length = 600

 Score =  365 bits (937), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 190/586 (32%), Positives = 328/586 (55%), Gaps = 22/586 (3%)

Query: 56  EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPF 114
           +GS++ I  +    L  +R   + ++ +++   +  +++      EDGF+ D DK+ Q  
Sbjct: 10  DGSVKKIDRDSEEGLQALRKLASLLLKDSLHQEFKGIRLGESVADEDGFHVDSDKDDQQV 69

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
           S+DEL+ ++     ++A+      +++  +    L E K + Y  E+++       V +Y
Sbjct: 70  SADELSALQ---DALLAKAKDAKVEFVEADLDDALAEVKDDPYSSELIKEAAKDGKVAMY 126

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
           + G+   +  G  +   G   K  KL+ VAGAYW+G S+ PML R+YGT + ++  L + 
Sbjct: 127 QVGDVKAVADGD-IMVYGDAIKHLKLLSVAGAYWKGMSSNPMLQRVYGTVFFSKDALDED 185

Query: 235 LYFLEESEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYE 292
           +   +E+ + DHR +  ++DLF +  + G+G+ +W  KG  I +T+  Y+  R++ D YE
Sbjct: 186 MKKRQEAREHDHRVIGNQLDLFFVDPKVGAGLPYWMPKGATIRRTIERYIIDREVADGYE 245

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
            + TP +++   ++ SGHW+ YR +MF        + D     ++PMNCP H+ ++ H +
Sbjct: 246 HVYTPVLMNLDAYKTSGHWEHYRDDMFPPM----DMGDGEMLEIRPMNCPSHIQIYKHHI 301

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
           +SYR+LP+R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  KI NLI+
Sbjct: 302 RSYRDLPMRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVAVDQIRDEFAKILNLIM 361

Query: 413 SIYKDFGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
            +YKDF       +LS R     EK  G+D +WD+++ ++K  +D +       ++    
Sbjct: 362 DVYKDFDITDYSFRLSLRDPKNKEKYYGNDEMWDESQKLLKAAMDDLN------LDYYEA 415

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
            GE AFYGPK +   K A+G D    TIQ+DF  P RF   YV    ++  PVMIHR + 
Sbjct: 416 EGEAAFYGPKLDIQTKTALGNDETMSTIQLDFMQPDRFGLSYVGKDGKEHMPVMIHRGIV 475

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFR 587
           G++ERF+  + E +KG  P WL+P Q  +  ++     +YA+++A+ +K+  + +  D R
Sbjct: 476 GTMERFVAYLTEIYKGAFPTWLAPEQVHIIPVSDEKHGDYAKQLADKMKAAQIRVVVDDR 535

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
           NE + YKIRE   +K+P  ++ GD E  + ++ +R++G      +S
Sbjct: 536 NEKMGYKIREAQTQKVPYTLVVGDDEVKDNAVSVRKYGEEAQNSMS 581


>gi|146100812|ref|XP_001468953.1| threonyl-tRNA synthetase [Leishmania infantum]
 gi|134073322|emb|CAM72048.1| putative threonyl-tRNA synthetase [Leishmania infantum JPCM5]
          Length = 788

 Score =  364 bits (935), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 229/745 (30%), Positives = 367/745 (49%), Gaps = 115/745 (15%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGS-DVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGS 58
           M + IK++ PDG + +     T   D+A+ +S SL  K +   +N  + DL+ P   +  
Sbjct: 44  MKAPIKVSLPDGKVMDAESWVTCPLDIAKRLSNSLPDKVIVARVNEALWDLTRPFEADCQ 103

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSD 117
           +E++  ++  +  V  HS +H++  A++ I+ + ++++GP +E+G F+Y+    +P S  
Sbjct: 104 LELLDWDEKDAREVFWHSSSHVLGYALERIF-DTKLSVGPALEEGGFFYEGLTNRPVSES 162

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES-IPAKENVTLYRQ 176
           +   IE  MQE++ +  P+ +  +S E A  LF   +  +K +IL S +P   + T+YR 
Sbjct: 163 DYKAIESAMQELVKQKMPYQRLEVSKEDALRLFGYTE--FKSKILASKVPDGGSCTVYRC 220

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           G   D CRGPH+  TG+VK F  + K + +Y  G +   +L R+YG ++     LT++  
Sbjct: 221 GMLIDPCRGPHLPDTGRVKAF-AVTKNSSSYLEGKAENEVLQRVYGISFPKNPMLTEWKT 279

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
             EE+ KRDHR + R+ +LF+  E   G  FW   G +I+ TL+ ++R+K +   ++E+ 
Sbjct: 280 IQEEAAKRDHRVIGRQQNLFNFHEVSPGSAFWLPHGARIYNTLVEFLRKKYRRCGFQEVI 339

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           +P +    LW  SGHW+ Y  NMF  KC  +       F LKPMNCPGH  +F     SY
Sbjct: 340 SPNMYSSKLWMVSGHWEKYADNMFCTKCEKED------FGLKPMNCPGHCIMFASQPHSY 393

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           +ELP+R A+FG ++RNE SG+L GL RVR F QDDAH+FC  +Q+ +E       +  +Y
Sbjct: 394 KELPIRYADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCRMDQITDEMEGQMQFLSDVY 453

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTI-------------------- 455
              GF K     STRP  ++GS+ALWD +E+ ++  L+                      
Sbjct: 454 GVLGF-KFYFYHSTRPANKLGSEALWDQSESYLRTALNRFCGIPEELPDPLHPDQRFHYD 512

Query: 456 ---------------------KNSSQDRINTG----VLLGEGAFYGPKFEYILKDAIGRD 490
                                 N+ +   N G       G+GAFYGPK + +++DA+ R 
Sbjct: 513 GKPDSVKKMKALMKKAERCEDPNAWKGPTNGGDGWIENAGDGAFYGPKIDIVVEDALRRR 572

Query: 491 WQCGTIQVDFNLPSRFNAFYVNSHSEK-------------CHPVM----------IHRAV 527
            QC TIQ+DFNLPSRF   Y    +EK               P +          + +  
Sbjct: 573 HQCATIQLDFNLPSRFGLKYTLPAAEKDETTVSPTEKQKHADPALTASSPAVEDCVSKPK 632

Query: 528 FGSIE---RFIGI----------------------------MIENFKGNLPLWLSPIQAI 556
            G+ E   R +GI                            + E+F G+ P WLSP Q +
Sbjct: 633 PGTYEAAVRDLGIDLELDANQARPVMIHRAILGSLERSIAILCEHFGGDWPFWLSPRQVM 692

Query: 557 VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASE 616
           V  +++S  EY+Q++ + +       + D    T++ KIR     +   I++ G KE   
Sbjct: 693 VVPVSASNYEYSQQVRDTMHDAGFHADVDNGAATLDKKIRNAEKARYNFILVVGQKEQDA 752

Query: 617 RSIGIRRFGSTTTQKVSLLDAIPIL 641
            ++ IR  G       SL++A+  L
Sbjct: 753 TAVNIRARGEKRLGNKSLVEAVQWL 777


>gi|227543651|ref|ZP_03973700.1| threonine--tRNA ligase [Lactobacillus reuteri CF48-3A]
 gi|300908708|ref|ZP_07126171.1| threonine--tRNA ligase [Lactobacillus reuteri SD2112]
 gi|227186362|gb|EEI66433.1| threonine--tRNA ligase [Lactobacillus reuteri CF48-3A]
 gi|300894115|gb|EFK87473.1| threonine--tRNA ligase [Lactobacillus reuteri SD2112]
          Length = 627

 Score =  364 bits (935), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 200/586 (34%), Positives = 326/586 (55%), Gaps = 21/586 (3%)

Query: 56  EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPF 114
           +GS++ I  +   SL  +R   A ++  A++  +  +++      EDGF+ D DK+ Q  
Sbjct: 36  DGSVKKIDRDSQESLEALRKLSALMLKAALKQEFKGIRLGEAVADEDGFHVDSDKDNQQV 95

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
           S+DEL  +E  ++ +   D       +  E+A  L E K + +  E++        V +Y
Sbjct: 96  SADELPALEDVIKGMAKNDVKVEFVEVPVEEA--LAEVKDDRFSTELINENAKDGKVAMY 153

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
           + G+         +   G V K  +L+ VAGAYW+G S+ PML RIYGT +  +  L + 
Sbjct: 154 QLGD-VKAVADDDILLYGNVVKNLRLLSVAGAYWKGMSSNPMLQRIYGTVFYKKDALEED 212

Query: 235 LYFLEESEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYE 292
           L   +E+++RDHR +  ++DLF +  + G+G+ +W  KG  I +T+  Y+  R++ D Y+
Sbjct: 213 LKKRQEAKERDHRVIGNQLDLFFVDPKVGAGLPYWLPKGATIRRTIERYIIDREVADGYQ 272

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
            + TP +++   ++ SGHW+ YR +MF        + D     L+PMNCP H+ V+ H +
Sbjct: 273 HVYTPVLMNLDAYKTSGHWEHYRDDMFPPM----DMGDGEMLELRPMNCPSHIQVYKHHI 328

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
           +SYR+LP+R+AE G ++R E SG+L GL RVR  T +D H F T +Q+ +E  KI  LI+
Sbjct: 329 RSYRDLPLRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVTLDQIRSEFAKILKLIM 388

Query: 413 SIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
           S+Y+DF       +LS R  K V     +D +W+ +++++K  +D +       ++    
Sbjct: 389 SVYEDFDITDYSFRLSLRDPKNVKKYYANDEMWEKSQSMLKSAMDDLN------LDYYEA 442

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
            GE AFYGPK +   K A+G D    TIQ+DF LP RF   YV    ++  PVMIHR V 
Sbjct: 443 EGEAAFYGPKLDIQTKTALGNDETMSTIQLDFMLPERFGLSYVGQDGKEHQPVMIHRGVV 502

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFR 587
           G++ERF+  + E +KG  P WL+P Q  +  +   A  EYA  +A  +K+ ++ +  D R
Sbjct: 503 GTMERFMAYLTEIYKGAFPTWLAPEQVHIIPVNEEAHGEYADNLAKKMKAANIRVNVDHR 562

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
           NE + YKIRE   +K+P  ++ GD E +   + +R++G     ++S
Sbjct: 563 NEKMGYKIREAQTQKVPYTLVVGDDEKNNNGVSVRKYGEKEQNEMS 608


>gi|168702447|ref|ZP_02734724.1| threonyl-tRNA synthetase [Gemmata obscuriglobus UQM 2246]
          Length = 620

 Score =  364 bits (934), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 211/603 (34%), Positives = 331/603 (54%), Gaps = 42/603 (6%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           DP +L  +RHS AH++A+AV   +P+ +  IGP  E GFYYDFD +   +  EL  I  +
Sbjct: 20  DP-ALYKLRHSLAHVLAQAVVEKFPQAKPTIGPPNEYGFYYDFDLDVNPTEGELEWIANR 78

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-----------VTLY 174
           M++II     F  + +S ++ R LF  K   YK+E+++ +   ++           +T+Y
Sbjct: 79  MKQIIKGKHAFKVREISADEGRALF--KDNPYKLELIDGLTKGQDEYGNASAAAPVLTVY 136

Query: 175 RQGEWFDLCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQ 233
           +Q  + DLCRGPHV +T  +  K FK+ +V G+YWRGDS    L R + TAW +  +L  
Sbjct: 137 QQDTFVDLCRGPHVEATNDLDPKGFKIQQVTGSYWRGDSKNKSLKRFHATAWASGDDLKA 196

Query: 234 YLYFLEESEKRDHRKLAREMDLF-HIAEDGSGVIFWHRKGW---KIFQTLIS-YMRRKIK 288
           +L  LEE+ KRDHRK+ RE+DLF +    GSG      KG    ++ +T I+ Y RR   
Sbjct: 197 HLARLEEAAKRDHRKVGRELDLFANEPVFGSGFPMLLPKGATIRRLLETFITDYERRA-- 254

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
             Y  + TP +  + L++ SGHWD Y+ +MF      +   D     L+PM CP H+ V+
Sbjct: 255 -GYLHVFTPDIAKKELYKISGHWDHYKDSMFPPMDMGEGGNDDEELCLRPMCCPHHIQVY 313

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
               +SYR+LP+R+AE G++YR E SG + GL RVR  T +DAH+F   +Q+ +E   + 
Sbjct: 314 KSKARSYRDLPIRIAELGNMYRFERSGVVGGLSRVRCMTLNDAHLFVRPDQVKHEIAGVL 373

Query: 409 NLIISIYKDFGFEKIMVKLSTRPE-------KRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            L+   Y D G  +   +LS   +       K V + A+W+ +  +++ VL        +
Sbjct: 374 QLMKKAYADLGITEYRFRLSKNADPDGPPSDKYVDNPAMWESSTKMLREVLQESGMPFFE 433

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
             N      E AFYGPK +  +KD +GR+    TIQ D +LP++F   Y +S      PV
Sbjct: 434 AWN------EAAFYGPKIDVQVKDVMGREETLSTIQADQHLPAKFELEYKDSDDTPKRPV 487

Query: 522 MIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLS 581
           MIHR V  ++ER +  +IE + G  P+WL+P+Q  +  I      +AQ++ + L      
Sbjct: 488 MIHRGVISTMERMMSYLIELYAGAFPVWLAPVQVAIVPIADRHFAFAQKLGDELLDKDYR 547

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR-RFGSTTTQK-----VSLL 635
           ++ D  ++ +  KIR+  ++KIP I++ GDKE    ++ +R R G+    K     V++L
Sbjct: 548 VDVDLGDKRMQAKIRDAQLQKIPYILVIGDKEMEANAVAVRLRDGTDLGAKPAAEFVAML 607

Query: 636 DAI 638
           +A+
Sbjct: 608 EAV 610


>gi|73951031|ref|XP_857184.1| PREDICTED: similar to threonyl-tRNA synthetase-like 2 isoform 3
           [Canis familiaris]
          Length = 711

 Score =  363 bits (933), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 189/471 (40%), Positives = 279/471 (59%), Gaps = 17/471 (3%)

Query: 171 VTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQE 230
            T+YR G   DLC+GPHVR TG++K   K+ K +  YW G+     L RIYG ++   + 
Sbjct: 237 TTVYRCGPLIDLCKGPHVRHTGKIKAI-KIFKNSSTYWEGNPEMETLQRIYGISFPDNKM 295

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KD 289
           +  +  F EE++ RDHRK+ +E +LF   +   G  F+  +G  I+ TL+ ++R +  + 
Sbjct: 296 MKTWEKFQEEAKNRDHRKVGKEQELFFFHDLSPGSCFFLPRGAFIYNTLMDFIREEYHRR 355

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
           ++ E+ +P + +  LW+ SGHW  Y  NMF      DT      FALKPMNCPGH  +F 
Sbjct: 356 NFTEVLSPNMFNSKLWETSGHWQHYSENMFTFDIEKDT------FALKPMNCPGHCLMFA 409

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
           H  +S+RE+PVRLA+FG ++RNE SG+L GL RVR F QDDAH+FCT EQ+  E      
Sbjct: 410 HRPRSWREMPVRLADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCTVEQIEEEIKGCLQ 469

Query: 410 LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL 469
            + S+Y  FGF    + LSTRPE  +G   LWD+AE  ++  L  ++     ++N     
Sbjct: 470 FLQSVYSTFGF-SFQLNLSTRPENFLGEVELWDEAEKQLQNSL--VEFGKPWKMNP---- 522

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVF 528
           G+GAFYGPK +  +KDAIGR  QC TIQ+DF LP RFN  YV+    +K +PV+IHRA+ 
Sbjct: 523 GDGAFYGPKIDIKIKDAIGRYHQCATIQLDFQLPIRFNLTYVSKDGDDKRNPVIIHRAIL 582

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRN 588
           GS+ER I I+ EN+ G  P WLSP Q +V  +  +  +YA ++++         + D  +
Sbjct: 583 GSVERMIAILSENYGGKWPFWLSPRQVMVIPVGPTCEKYALQVSSAFFEEGFMADVDLDH 642

Query: 589 E-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
             T+N KIR   + +   I++ G+KE +  ++ +R   +    ++S+  AI
Sbjct: 643 SCTLNKKIRNAQLAQYNFILVVGEKEKTNNAVNVRTRDNKIHGEISVTSAI 693


>gi|148545068|ref|YP_001272438.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Lactobacillus
           reuteri DSM 20016]
 gi|148532102|gb|ABQ84101.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Lactobacillus
           reuteri DSM 20016]
          Length = 601

 Score =  363 bits (932), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 199/586 (33%), Positives = 326/586 (55%), Gaps = 21/586 (3%)

Query: 56  EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPF 114
           +GS++ I  +    L  +R   A ++  A++  +  +++      EDGF+ D DK+ Q  
Sbjct: 10  DGSVKKIDRDSQEGLEALRKLSALMLKAALKQEFKGIRLGEAVADEDGFHVDSDKDNQQV 69

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
           S+DEL  +E  ++ +   D       +  E+A  L E K + +  E++        V +Y
Sbjct: 70  SADELPALEDVIKGMAKNDVKVEFVEVPVEEA--LAEVKDDRFSTELINENAKDGKVAMY 127

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
           + G+         +   G V K  +L+ VAGAYW+G S+ PML RIYGT +  +  L + 
Sbjct: 128 QLGD-VKAVADDDILLYGNVVKNLRLLSVAGAYWKGMSSNPMLQRIYGTVFYKKDALEED 186

Query: 235 LYFLEESEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYE 292
           L   +E+++RDHR +  ++DLF +  + G+G+ +W  KG  I +T+  Y+  R++ D Y+
Sbjct: 187 LKKRQEAKERDHRVIGNQLDLFFVDPKVGAGLPYWLPKGATIRRTIERYIIDREVADGYQ 246

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
            + TP +++   ++ SGHW+ YR +MF        + D     L+PMNCP H+ V+ H +
Sbjct: 247 HVYTPVLMNLDAYKTSGHWEHYRDDMFPPM----DMGDGEMLELRPMNCPSHIQVYKHHI 302

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
           +SYR+LP+R+AE G ++R E SG+L GL RVR  T +D H F T +Q+ +E  KI  LI+
Sbjct: 303 RSYRDLPLRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVTLDQIRSEFAKILKLIM 362

Query: 413 SIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
           S+Y+DF       +LS R  K V     +D +W+ +++++K  +D +       ++    
Sbjct: 363 SVYEDFDITDYSFRLSLRDPKNVKKYYANDEMWEKSQSMLKSAMDDLN------LDYYEA 416

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
            GE AFYGPK +   K A+G D    TIQ+DF LP RF   YV    ++  PVMIHR V 
Sbjct: 417 EGEAAFYGPKLDIQTKTALGNDETMSTIQLDFMLPERFGLSYVGQDGKEHQPVMIHRGVV 476

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFR 587
           G++ERF+  + E +KG  P WL+P Q  +  +   A  EYA ++A  +K+ ++ +  D R
Sbjct: 477 GTMERFMAYLTEIYKGAFPTWLAPEQVHIIPVNEEAHGEYADDLAKKMKAANIRVNVDHR 536

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
           NE + YKIRE   +K+P  ++ GD E +   + +R++G     ++S
Sbjct: 537 NEKMGYKIREAQTQKVPYTLVVGDDEKNNNGVSVRKYGEKEQNEMS 582


>gi|184154400|ref|YP_001842741.1| threonyl-tRNA synthase [Lactobacillus reuteri JCM 1112]
 gi|227364219|ref|ZP_03848315.1| threonine--tRNA ligase [Lactobacillus reuteri MM2-3]
 gi|325683422|ref|ZP_08162938.1| threonine--tRNA ligase [Lactobacillus reuteri MM4-1A]
 gi|183225744|dbj|BAG26261.1| threonyl-tRNA synthase [Lactobacillus reuteri JCM 1112]
 gi|227070764|gb|EEI09091.1| threonine--tRNA ligase [Lactobacillus reuteri MM2-3]
 gi|324977772|gb|EGC14723.1| threonine--tRNA ligase [Lactobacillus reuteri MM4-1A]
          Length = 627

 Score =  363 bits (932), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 199/586 (33%), Positives = 326/586 (55%), Gaps = 21/586 (3%)

Query: 56  EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPF 114
           +GS++ I  +    L  +R   A ++  A++  +  +++      EDGF+ D DK+ Q  
Sbjct: 36  DGSVKKIDRDSQEGLEALRKLSALMLKAALKQEFKGIRLGEAVADEDGFHVDSDKDNQQV 95

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
           S+DEL  +E  ++ +   D       +  E+A  L E K + +  E++        V +Y
Sbjct: 96  SADELPALEDVIKGMAKNDVKVEFVEVPVEEA--LAEVKDDRFSTELINENAKDGKVAMY 153

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
           + G+         +   G V K  +L+ VAGAYW+G S+ PML RIYGT +  +  L + 
Sbjct: 154 QLGD-VKAVADDDILLYGNVVKNLRLLSVAGAYWKGMSSNPMLQRIYGTVFYKKDALEED 212

Query: 235 LYFLEESEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYE 292
           L   +E+++RDHR +  ++DLF +  + G+G+ +W  KG  I +T+  Y+  R++ D Y+
Sbjct: 213 LKKRQEAKERDHRVIGNQLDLFFVDPKVGAGLPYWLPKGATIRRTIERYIIDREVADGYQ 272

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
            + TP +++   ++ SGHW+ YR +MF        + D     L+PMNCP H+ V+ H +
Sbjct: 273 HVYTPVLMNLDAYKTSGHWEHYRDDMFPPM----DMGDGEMLELRPMNCPSHIQVYKHHI 328

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
           +SYR+LP+R+AE G ++R E SG+L GL RVR  T +D H F T +Q+ +E  KI  LI+
Sbjct: 329 RSYRDLPLRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVTLDQIRSEFAKILKLIM 388

Query: 413 SIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
           S+Y+DF       +LS R  K V     +D +W+ +++++K  +D +       ++    
Sbjct: 389 SVYEDFDITDYSFRLSLRDPKNVKKYYANDEMWEKSQSMLKSAMDDLN------LDYYEA 442

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
            GE AFYGPK +   K A+G D    TIQ+DF LP RF   YV    ++  PVMIHR V 
Sbjct: 443 EGEAAFYGPKLDIQTKTALGNDETMSTIQLDFMLPERFGLSYVGQDGKEHQPVMIHRGVV 502

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFR 587
           G++ERF+  + E +KG  P WL+P Q  +  +   A  EYA ++A  +K+ ++ +  D R
Sbjct: 503 GTMERFMAYLTEIYKGAFPTWLAPEQVHIIPVNEEAHGEYADDLAKKMKAANIRVNVDHR 562

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
           NE + YKIRE   +K+P  ++ GD E +   + +R++G     ++S
Sbjct: 563 NEKMGYKIREAQTQKVPYTLVVGDDEKNNNGVSVRKYGEKEQNEMS 608


>gi|194467309|ref|ZP_03073296.1| threonyl-tRNA synthetase [Lactobacillus reuteri 100-23]
 gi|194454345|gb|EDX43242.1| threonyl-tRNA synthetase [Lactobacillus reuteri 100-23]
          Length = 601

 Score =  363 bits (931), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 199/586 (33%), Positives = 325/586 (55%), Gaps = 21/586 (3%)

Query: 56  EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPF 114
           +GS++ I  +    L  +R   A ++  A++  +  +++      EDGF+ D DK+ Q  
Sbjct: 10  DGSVKKIDRDSQEGLEALRKLSALMLKAALKQEFKGIRLGEAVADEDGFHVDSDKDNQQV 69

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
           S+DEL  +E  ++ +   D       +  E+A  L E K + +  E++        V +Y
Sbjct: 70  SADELPALEDVIKGMAKNDVKVEFVEVPVEEA--LAEVKDDRFSTELINENAKDGKVAMY 127

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
           + G+         +   G V K  +L+ VAGAYW+G S+ PML RIYGT +  +  L + 
Sbjct: 128 QLGD-VKAVADDDILLYGNVVKNLRLLSVAGAYWKGMSSNPMLQRIYGTVFYKKDALEED 186

Query: 235 LYFLEESEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYE 292
           L   +E+++RDHR +  ++DLF +  + G+G+ +W  KG  I +T+  Y+  R++ D Y+
Sbjct: 187 LKKRQEAKERDHRVIGNQLDLFFVDPKVGAGLPYWLPKGATIRRTIERYIIDREVADGYQ 246

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
            + TP +++   ++ SGHW+ YR +MF        + D     L+PMNCP H+ V+ H +
Sbjct: 247 HVYTPVLMNLDAYKTSGHWEHYRDDMFPPM----DMGDGEMLELRPMNCPSHIQVYKHHI 302

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
           +SYR+LP+R+AE G ++R E SG+L GL RVR  T +D H F T +Q+ +E  KI  LI+
Sbjct: 303 RSYRDLPLRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVTLDQIRSEFAKILKLIM 362

Query: 413 SIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
           S+Y+DF       +LS R  K V     +D +W+ +++++K  +D +       ++    
Sbjct: 363 SVYEDFDITDYSFRLSLRDPKNVKKYYANDEMWEKSQSMLKSAMDDLN------LDYYEA 416

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
            GE AFYGPK +   K A+G D    TIQ+DF LP RF   YV    ++  PVMIHR V 
Sbjct: 417 EGEAAFYGPKLDIQTKTALGNDETMSTIQLDFMLPERFGLSYVGQDGKEHQPVMIHRGVV 476

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFR 587
           G++ERF+  + E +KG  P WL+P Q  +  +   A  EYA  +A  +K+ ++ +  D R
Sbjct: 477 GTMERFMAYLTEIYKGAFPTWLAPEQVHIIPVNEEAHGEYADNLAKKMKAANIRVNVDHR 536

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
           NE + YKIRE   +K+P  ++ GD E +   + +R++G     ++S
Sbjct: 537 NEKMGYKIREAQTQKVPYTLVVGDDEKNNNGVSVRKYGEKEQNEMS 582


>gi|322495387|emb|CBZ30691.1| putative threonyl-tRNA synthetase [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 787

 Score =  362 bits (930), Expect = 7e-98,   Method: Compositional matrix adjust.
 Identities = 228/745 (30%), Positives = 360/745 (48%), Gaps = 121/745 (16%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGS-DVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGS 58
           M + IK++ PDG + +     T   D+A  +S SL  K +   +N  + DL+ P   +  
Sbjct: 43  MKAPIKVSLPDGKVMDAESWVTCPRDIARRLSNSLPDKVIVARVNEALWDLTRPFEADCQ 102

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSD 117
           +E++  +D  +  V  HS +H++  A++ I+ + ++++GP +E+G F+Y+    +P S  
Sbjct: 103 LELLDWDDKDAREVFWHSSSHVLGYALERIF-DTKLSVGPALEEGGFFYEGLTNRPVSES 161

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES-IPAKENVTLYRQ 176
           +   IE  MQE++ +  P+ +  +S E A  LF   +  +K +IL S +P   + T+YR 
Sbjct: 162 DYKAIESAMQELVKQKMPYQRLEVSKEDALRLFGYTE--FKSKILASKVPDGGSCTVYRC 219

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           G   D CRGPH+  TG+VK F  + K + +Y+ G +   +L R+YG ++     LT++  
Sbjct: 220 GMLIDPCRGPHLPDTGRVKAF-AVTKNSSSYFEGKAENEVLQRVYGISFPKNPMLTEWKM 278

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
             EE+ KRDHR + R+ +LF+  E   G  FW   G +I+ TL+ ++R+K +   ++E+ 
Sbjct: 279 IQEEAAKRDHRVIGRQQNLFNFHEVSPGSAFWLPHGARIYNTLVEFLRKKYRCCGFQEVI 338

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           +P +    LW  SGHW+ Y  NMF  KC  +       F LKPMNCPGH  +F     SY
Sbjct: 339 SPNMYSSKLWMVSGHWEKYADNMFCTKCEKED------FGLKPMNCPGHCIMFASQPHSY 392

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           +ELP+R A+FG ++RNE SG+L GL RVR F QDDAH+FC  +Q+ +E       +  +Y
Sbjct: 393 KELPIRYADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCRMDQITDEMEGQMQFLSDVY 452

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTI-------------------- 455
              GF K     STRP  ++GSDALWD +E+ ++  L+                      
Sbjct: 453 GVLGF-KFYFYHSTRPANKLGSDALWDQSESYLRTALNRFCGIPEELPDPLHPDQRFHYD 511

Query: 456 ----------------------------KNSSQDRINTGVLLGEGAFYGPKFEYILKDAI 487
                                        N S+  I      G+GAFYGPK + +++DA+
Sbjct: 512 GKPDSVKKMKMLMKKAERSEDPNAWKGPTNGSEGWIENA---GDGAFYGPKIDIVVEDAL 568

Query: 488 GRDWQCGTIQVDFNLPSRFNAFYVNSHSEK----CHPVMIHR------------------ 525
            R  QC TIQ+DFNLPSRF   Y    +EK      P    R                  
Sbjct: 569 RRRHQCATIQLDFNLPSRFGLKYTLPTAEKDEATVGPTEKRRHADPASTASSPAVAEGES 628

Query: 526 ----AVFGSIERFIGIMIE----------------------------NFKGNLPLWLSPI 553
                 + +  R +GI +E                            +F G+ P WLSP 
Sbjct: 629 KPKPGTYEAAVRDLGIDLELDANQARPVMIHRAILGSLERSIAILCEHFGGDWPFWLSPR 688

Query: 554 QAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
           Q +V  +++S  EY+Q++ + +       + D    T++ KIR     +   I++ G +E
Sbjct: 689 QVMVVPVSASNYEYSQQVRDTMHDAGFHADVDNGAATLDKKIRNAEKARYNFILVVGQQE 748

Query: 614 ASERSIGIRRFGSTTTQKVSLLDAI 638
                + IR  G       SL +A+
Sbjct: 749 QDATGVNIRARGERRLGNKSLEEAL 773


>gi|227529941|ref|ZP_03959990.1| threonine--tRNA ligase [Lactobacillus vaginalis ATCC 49540]
 gi|227350126|gb|EEJ40417.1| threonine--tRNA ligase [Lactobacillus vaginalis ATCC 49540]
          Length = 601

 Score =  362 bits (930), Expect = 8e-98,   Method: Compositional matrix adjust.
 Identities = 197/586 (33%), Positives = 326/586 (55%), Gaps = 21/586 (3%)

Query: 56  EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPF 114
           +GS++ I  +    L  +R   A ++  A++  +  +++      EDGF+ D DK+ Q  
Sbjct: 10  DGSVKKIDRDSKEGLQALRKLSALMLKVALKQEFKGIRLGEAVADEDGFHVDSDKDNQQV 69

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
           S+DEL  +E  ++ +   D+    +++       L E + + +  E+++       V +Y
Sbjct: 70  SADELPALEDVIKGMAKNDAKV--EFVEVPVEDALTEVEADRFSSELIKESAKDGKVAMY 127

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
           + G+         +   G V K  +L+ VAGAYW+G S+ PML RIYGT +  +  L + 
Sbjct: 128 QLGD-VKAVADDDILLYGDVVKNLRLLSVAGAYWKGMSSNPMLQRIYGTVFYKKDALEED 186

Query: 235 LYFLEESEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYE 292
           L   +E+++RDHR +  ++DLF +  + G+G+ +W  KG  I +T+  Y+  R++ D Y+
Sbjct: 187 LKKRQEAKERDHRVIGNQLDLFFVDPKVGAGLPYWMPKGATIRRTIERYIIDREVADGYK 246

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
            + TP +++   ++ SGHW+ YR +MF        + D     L+PMNCP H+ ++ H +
Sbjct: 247 HVYTPVLMNLDAYKTSGHWEHYRDDMFPPM----DMGDGEMLELRPMNCPSHIQIYKHHI 302

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
           +SYR+LP+R+AE G ++R E SG+L GL RVR  T +D H F T +Q+ +E  KI  LI+
Sbjct: 303 RSYRDLPLRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVTLDQIRSEFAKILRLIM 362

Query: 413 SIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
            +YKDF       +LS R  K V     +D +W+ +++++K  +D +       ++    
Sbjct: 363 DVYKDFDITDYSFRLSLRDPKNVKKYYANDEMWEKSQSMLKKAMDDLN------LDYYEA 416

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
            GE AFYGPK +   K A+G D    TIQ+DF LP RF   YV    ++  PVMIHR V 
Sbjct: 417 EGEAAFYGPKLDIQTKTALGNDETMSTIQLDFMLPERFGLTYVGQDGKEHQPVMIHRGVV 476

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFR 587
           G++ERFI  + E +KG  P WL+P Q  +  +   A  EYA E+A  +K+ ++ +  D R
Sbjct: 477 GTMERFIAYLTEIYKGAFPTWLAPEQVHIIPVNEDAHGEYADELAKKMKAANIRVVVDHR 536

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
           NE + YKIRE   +K+P  ++ GD E +   + +R++G     ++S
Sbjct: 537 NEKMGYKIRESQTQKVPYTLVVGDDEKANNGVSVRKYGEKEQNEMS 582


>gi|72547539|ref|XP_843247.1| threonyl-tRNA synthetase [Leishmania major strain Friedlin]
 gi|323363762|emb|CBZ12768.1| putative threonyl-tRNA synthetase [Leishmania major strain
           Friedlin]
          Length = 787

 Score =  362 bits (930), Expect = 8e-98,   Method: Compositional matrix adjust.
 Identities = 227/742 (30%), Positives = 365/742 (49%), Gaps = 115/742 (15%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGS-DVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGS 58
           M + IK++ PDG + +     T   D+A+ +S SL  K +   +N  + DL+ P   +  
Sbjct: 43  MKAPIKVSLPDGKVMDAESWVTCPLDIAKRLSNSLPDKVIVARVNEALWDLTRPFEADCQ 102

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSD 117
           +E++   +  +  V  HS +H++  A++ I+ + ++++GP +E+G F+Y+    +P S  
Sbjct: 103 LELLDWAEKDAREVFWHSSSHVLGYALERIF-DTKLSVGPALEEGGFFYEGLTNRPVSES 161

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES-IPAKENVTLYRQ 176
           +   IE  MQE++ +  P+ +  +S E A  LF   +  +K +IL S +P   + T+YR 
Sbjct: 162 DYKAIESAMQELVKQKMPYQRLEVSKEDALRLFGYTE--FKSKILASKVPDGGSCTVYRC 219

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           G   D CRGPH+  TG+VK F  + K + +Y+ G +   +L R+YG ++     LT++  
Sbjct: 220 GMLIDPCRGPHLPDTGRVKAF-AVTKNSSSYFEGKAENEVLQRVYGISFPKNPMLTEWKT 278

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
             EE+ KRDHR + R+ +LF+  E   G  FW   G +I+ TL+ ++R+K +   ++E+ 
Sbjct: 279 IQEEAAKRDHRVIGRQQNLFNFHEVSPGSAFWLPHGARIYNTLVEFLRKKYRRCGFQEVI 338

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           +P +    LW  SGHW+ Y  +MF  KC  +       F LKPMNCPGH  +F     SY
Sbjct: 339 SPNMYSSKLWMVSGHWEKYADSMFCTKCEKED------FGLKPMNCPGHCIMFASQPHSY 392

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           +ELP+R A+FG ++RNE SG+L GL RVR F QDDAH+FC  +Q+ +E       +  +Y
Sbjct: 393 KELPIRYADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCRMDQITDEMEGQMQFLSDVY 452

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTI-------------------- 455
              GF K     STRP  ++GSDALWD +E+ ++  L+                      
Sbjct: 453 GVLGF-KFYFYHSTRPANKLGSDALWDQSESYLRTALNRFCGIPEELPDPLHPDQRFHYD 511

Query: 456 ---------------------KNSSQDRINTG----VLLGEGAFYGPKFEYILKDAIGRD 490
                                 N+ +   N G      +G+GAFYGPK + +++DA+ R 
Sbjct: 512 GKPDSVKKMKALMKKAERSEDPNAWKGPTNGGDGWIENVGDGAFYGPKIDIVVEDALRRR 571

Query: 491 WQCGTIQVDFNLPSRFNAFYVNSHSEKCH---------------PVMIHRAV-------- 527
            QC TIQ+DFNLPSRF   Y    +EK                 P     AV        
Sbjct: 572 HQCATIQLDFNLPSRFGLKYTLPAAEKDETTVGPTEKQRHADPAPTASSPAVAEGESKPK 631

Query: 528 ---FGSIERFIGIMIE----------------------------NFKGNLPLWLSPIQAI 556
              + +  R +GI +E                            +F G+ P WLSP Q +
Sbjct: 632 PGKYEAAVRDLGIDLELDANQARPVMIHRAILGSLERSIAILCEHFGGDWPFWLSPRQVM 691

Query: 557 VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASE 616
           V  +++S  EY+Q++ + +      ++ D    T++ KIR     +   I++ G +E   
Sbjct: 692 VVPVSASNYEYSQQVRDTIHDAGFHVDVDNGAATLDKKIRNAEKARYNFILVVGQQEQDA 751

Query: 617 RSIGIRRFGSTTTQKVSLLDAI 638
             + IR  G       SL++A+
Sbjct: 752 TGVSIRARGEKRLGNKSLVEAV 773


>gi|144574986|gb|AAZ43589.2| threonyl-tRNA synthetase [Mycoplasma synoviae 53]
          Length = 580

 Score =  362 bits (929), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 203/571 (35%), Positives = 319/571 (55%), Gaps = 39/571 (6%)

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIAR 132
           + H+ +H++A AV  ++PE ++  GP   +GFYYDF+ ++P S  EL +IEK M+++ +R
Sbjct: 7   LNHTTSHLLAAAVLKLFPETKLGFGPATSEGFYYDFEFKEPLSDSELLKIEKMMKKLASR 66

Query: 133 DSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-ENVTLY-------RQGEWFDLCR 184
           +    +  LS       +    + YK E+     ++ + VT Y       ++  + DLC 
Sbjct: 67  NLKMKQVSLSD------YSFDNQPYKKELYNEFKSQNKEVTFYTLADPLNKEKVFTDLCA 120

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           G HV  T  +K F KL+ +AGAYWRG+S+   L+RIYGT+W T++EL ++L  L++ ++R
Sbjct: 121 GGHVEDTKHIKHF-KLLSLAGAYWRGNSDNIQLTRIYGTSWETKEELDEFLAILKDRKER 179

Query: 245 DHRKLAREMDLFHIAE-DGSGVIFWHRKGWKI---FQTLISYMRRKIKDDYEEINTPQVL 300
           DHRK+ +EM LF      G G  FW   G  I    + L+  M +K    + E+ TP   
Sbjct: 180 DHRKIGKEMKLFTFNPLGGQGFPFWLEDGMHIHNEIRNLVLKMDKKY--GFTEVLTPHFG 237

Query: 301 DQHLWQQSGHWDSYRANMFA-VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           ++ L++ SGH D Y+ +MF  + C ++ +        +PM CP H+ +F    +SYR+LP
Sbjct: 238 EEKLYKISGHLDHYKDDMFKPIVCENERL------IPRPMTCPHHIILFGSEKRSYRDLP 291

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R +E   +YR E SG+L GL RVR     + H+F  K+Q+  E  K+  LI      F 
Sbjct: 292 IRYSEQSQLYRYEKSGALTGLERVRSMLLTEGHLFVRKDQIAQEFKKMFELISDTLNAFK 351

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
            +   V LS R     EK   +D +WD AE  +K ++  +    +++I      GE AFY
Sbjct: 352 IKINYVSLSLRDKADKEKYYANDQMWDAAEFELKKIIKELGIKYEEKI------GEAAFY 405

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +  A+  +    TIQ+DF LP +F   Y NS + +  PV+IHR + G+ ERFI
Sbjct: 406 GPKVDIQILTALNHEVTVSTIQLDFLLPQKFEISYTNSENNEEVPVLIHRGLIGTYERFI 465

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IE  KGNLP WL+P Q  +  +  +   EYA+E+ + L +  +  + DFRNE ++ K
Sbjct: 466 SILIEQTKGNLPFWLAPKQVTIIPVNENTDYEYAKEVNDKLLALDIRSKVDFRNERLSKK 525

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFG 625
           +RE  I K    +I G+ E + ++I  RR+G
Sbjct: 526 VREAQISKSKFQVILGEAEKTNKTISYRRYG 556


>gi|71894192|ref|YP_278300.1| threonyl-tRNA synthetase [Mycoplasma synoviae 53]
          Length = 581

 Score =  362 bits (929), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 203/571 (35%), Positives = 319/571 (55%), Gaps = 39/571 (6%)

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIAR 132
           + H+ +H++A AV  ++PE ++  GP   +GFYYDF+ ++P S  EL +IEK M+++ +R
Sbjct: 8   LNHTTSHLLAAAVLKLFPETKLGFGPATSEGFYYDFEFKEPLSDSELLKIEKMMKKLASR 67

Query: 133 DSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-ENVTLY-------RQGEWFDLCR 184
           +    +  LS       +    + YK E+     ++ + VT Y       ++  + DLC 
Sbjct: 68  NLKMKQVSLSD------YSFDNQPYKKELYNEFKSQNKEVTFYTLADPLNKEKVFTDLCA 121

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           G HV  T  +K F KL+ +AGAYWRG+S+   L+RIYGT+W T++EL ++L  L++ ++R
Sbjct: 122 GGHVEDTKHIKHF-KLLSLAGAYWRGNSDNIQLTRIYGTSWETKEELDEFLAILKDRKER 180

Query: 245 DHRKLAREMDLFHIAE-DGSGVIFWHRKGWKI---FQTLISYMRRKIKDDYEEINTPQVL 300
           DHRK+ +EM LF      G G  FW   G  I    + L+  M +K    + E+ TP   
Sbjct: 181 DHRKIGKEMKLFTFNPLGGQGFPFWLEDGMHIHNEIRNLVLKMDKKY--GFTEVLTPHFG 238

Query: 301 DQHLWQQSGHWDSYRANMFA-VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           ++ L++ SGH D Y+ +MF  + C ++ +        +PM CP H+ +F    +SYR+LP
Sbjct: 239 EEKLYKISGHLDHYKDDMFKPIVCENERL------IPRPMTCPHHIILFGSEKRSYRDLP 292

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R +E   +YR E SG+L GL RVR     + H+F  K+Q+  E  K+  LI      F 
Sbjct: 293 IRYSEQSQLYRYEKSGALTGLERVRSMLLTEGHLFVRKDQIAQEFKKMFELISDTLNAFK 352

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
            +   V LS R     EK   +D +WD AE  +K ++  +    +++I      GE AFY
Sbjct: 353 IKINYVSLSLRDKADKEKYYANDQMWDAAEFELKKIIKELGIKYEEKI------GEAAFY 406

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +  A+  +    TIQ+DF LP +F   Y NS + +  PV+IHR + G+ ERFI
Sbjct: 407 GPKVDIQILTALNHEVTVSTIQLDFLLPQKFEISYTNSENNEEVPVLIHRGLIGTYERFI 466

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IE  KGNLP WL+P Q  +  +  +   EYA+E+ + L +  +  + DFRNE ++ K
Sbjct: 467 SILIEQTKGNLPFWLAPKQVTIIPVNENTDYEYAKEVNDKLLALDIRSKVDFRNERLSKK 526

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFG 625
           +RE  I K    +I G+ E + ++I  RR+G
Sbjct: 527 VREAQISKSKFQVILGEAEKTNKTISYRRYG 557


>gi|310823910|ref|YP_003956268.1| threonyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|309396982|gb|ADO74441.1| Threonyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
          Length = 397

 Score =  362 bits (929), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 172/384 (44%), Positives = 243/384 (63%), Gaps = 13/384 (3%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQH 303
           DHR L   +DLFH+ E+  G++FWH +G+ ++Q L   +RR++    Y E+ TPQVL Q 
Sbjct: 6   DHRALGDRLDLFHLQEEAPGMVFWHPRGFVLYQLLEERVRRELASGGYREVRTPQVLGQR 65

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           +W+ SGHW ++R  MF +   +      R FA+KP++CPGH+ +F     S+R LP+R+A
Sbjct: 66  IWESSGHWQNFRHGMFVLDDGE------RPFAMKPVSCPGHIQLFQRLAPSFRSLPLRMA 119

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFG V+RNE SG+LHGL R+R FTQDD H+FC +EQ+ +E       + + Y+ FGFE  
Sbjct: 120 EFGLVHRNESSGALHGLFRLRQFTQDDGHIFCMEEQVADEVAAFCRSLRAFYRGFGFEDA 179

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            V  S+RP +R G DALWD AE  +      +       ++  +  GEGAFYGPK E+IL
Sbjct: 180 QVAFSSRPAQRAGDDALWDRAEAALLEAAGRVG------LDCRMQPGEGAFYGPKLEFIL 233

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           KD  GRDWQCGTIQ+DF LP RF+  YV+S  EK  P M+HRA+FGS+ERF+GI++E+ +
Sbjct: 234 KDRSGRDWQCGTIQLDFVLPERFDLHYVDSGGEKRRPAMLHRAIFGSVERFLGILLEHHQ 293

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G LP WL+P Q  V  + + +  YA E+   L +  L +E D R ET++ +I E     +
Sbjct: 294 GVLPAWLAPEQVRVLPVGADSHAYAAEVQEHLLAAGLRVEADARGETLSRRILEAHQDAV 353

Query: 604 PIIIICGDKEASERSIGIRRFGST 627
           P  ++ G +E + RSI IR  G  
Sbjct: 354 PFAVLVGPREQAGRSIQIRERGGA 377


>gi|58699329|ref|ZP_00374107.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|58534152|gb|EAL58373.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
          Length = 356

 Score =  362 bits (929), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 173/364 (47%), Positives = 250/364 (68%), Gaps = 12/364 (3%)

Query: 5   IKLTF-PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           I++TF  +  +K +    TG D+ +     + K+A+A  +NG++ DLS  +  +  IE+I
Sbjct: 2   IRITFSAEQKVKEYSGKVTGFDILQP---DVLKEAIAFKVNGELHDLSREIEADAEIEVI 58

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
              D   L +IRH  AHIMA+AV+ ++P  Q+ IGP I+DGFYYDF   + F++D+L  I
Sbjct: 59  QLSDEAGLDIIRHDAAHIMAQAVKELFPNTQITIGPTIQDGFYYDFATGRTFTTDDLTAI 118

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EKKM+EI+  +  F+++  + ++A + F    E YKV+I+ SIP  EN+T+YRQG++ DL
Sbjct: 119 EKKMKEIVKSNHRFVREVWTRKQAIDFFSDIGEKYKVDIISSIPEGENLTVYRQGDFIDL 178

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH  STG+VK  FKLMKVAGAYWRGD+  PML RIYGTAW  + EL  YL  L+E+E
Sbjct: 179 CRGPHSPSTGRVKA-FKLMKVAGAYWRGDAKGPMLQRIYGTAWRNKDELNAYLECLKEAE 237

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLD 301
           KRDHRK+A++MDLFHI E+  G +FWH +G+ ++  L SY+R+K I + Y E+ TP ++ 
Sbjct: 238 KRDHRKIAKDMDLFHIQEEAVGQVFWHEQGYILYNVLESYIRKKLINNGYFEVKTPILVS 297

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW++SGHWD +R NMF V  ++      +  A+KPMNCP HV +FN   +SYR+LP+R
Sbjct: 298 KELWEKSGHWDKFRENMFIVDESES-----KKLAIKPMNCPCHVQIFNSHTRSYRDLPIR 352

Query: 362 LAEF 365
           +A+ 
Sbjct: 353 MADL 356


>gi|312870359|ref|ZP_07730484.1| threonine--tRNA ligase [Lactobacillus oris PB013-T2-3]
 gi|311094060|gb|EFQ52379.1| threonine--tRNA ligase [Lactobacillus oris PB013-T2-3]
          Length = 600

 Score =  361 bits (927), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 191/586 (32%), Positives = 325/586 (55%), Gaps = 22/586 (3%)

Query: 56  EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPF 114
           +GS++ I  +    L  +R   + ++ +++   +  +++      E+GF+ D DK EQ  
Sbjct: 10  DGSVKKIDRDSEEGLQALRKLASLLLKDSLHQEFKGIRLGESVADENGFHVDSDKDEQQV 69

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
           S+DEL+ ++     ++A+      +++  +    L E K + Y  E+++       V +Y
Sbjct: 70  SADELSALQ---DALLAKAKNAKVEFVEVDLDDALAEVKDDPYSSELIKEAAKDGKVAMY 126

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
           + G+         +   G   K  KL+ VAGAYW+G S+ PML RIYGT +  ++ L + 
Sbjct: 127 QVGD-VKAVADDDILLYGDAIKHLKLLSVAGAYWKGMSSNPMLQRIYGTVFFNKEALDED 185

Query: 235 LYFLEESEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYE 292
           +   +E+ + DHR +  ++DLF +  + G+G+ +W  KG  I +T+  Y+  R++ D YE
Sbjct: 186 MKKRQEAREHDHRVIGNQLDLFFVDPKVGAGLPYWMPKGATIRRTIERYIIDREVADGYE 245

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
            + TP +++   ++ SGHW+ YR +MF        + D     ++PMNCP H+ ++ H +
Sbjct: 246 HVYTPVLMNLDAYKTSGHWEHYRDDMFPPM----DMGDGEMLEIRPMNCPSHIQIYKHHI 301

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
           +SYR+LP+R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  KI NLI+
Sbjct: 302 RSYRDLPMRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVAVDQIRDEFAKILNLIM 361

Query: 413 SIYKDFGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
            +YKDF       +LS R     EK  G+D +WD+++ ++K  +D +       ++    
Sbjct: 362 DVYKDFDITDYSFRLSLRDPKNKEKYYGNDEMWDESQKLLKAAMDDLN------LDYYEA 415

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
            GE AFYGPK +   K A+G D    TIQ+DF  P RF   YV    ++  PVMIHR + 
Sbjct: 416 EGEAAFYGPKLDIQTKTALGNDETMSTIQLDFMQPDRFGLSYVGKDGKEHMPVMIHRGIV 475

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFR 587
           G++ERF+  + E +KG  P WL+P Q  +  ++     +YAQ++A+ +K+  + +  D R
Sbjct: 476 GTMERFVAYLTEIYKGAFPTWLAPEQVHIIPVSEEKHGDYAQKLADKMKAAQIRVVVDDR 535

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
           NE + YKIRE   +K+P  ++ GD E    ++ +R++G      +S
Sbjct: 536 NEKMGYKIREAQTQKVPYTLVVGDDEVKNNAVSVRKYGEDAQNSMS 581


>gi|240280652|gb|EER44156.1| threonyl-tRNA synthetase [Ajellomyces capsulatus H143]
 gi|325089093|gb|EGC42403.1| threonyl-tRNA synthetase [Ajellomyces capsulatus H88]
          Length = 733

 Score =  361 bits (926), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 209/656 (31%), Positives = 336/656 (51%), Gaps = 79/656 (12%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGK-VCDLSDPV-REGSIEIITPEDPRSLAVIRHSCA 78
            T       I + ++   V   ++GK + DL  P+ R+  +  +  +      V  HS A
Sbjct: 83  TTPGSFLRDIPKEISSTVVIAKLDGKELWDLDRPLERDCRVTFLPFDSIEGREVFWHSSA 142

Query: 79  HIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE--QPFSSDELAQIEKKMQEIIARDSPF 136
           H++ EA +  +    ++ GP    GF+YD   E        +   ++ K   I     PF
Sbjct: 143 HVLGEACECYY-GCLLSHGPPTPQGFFYDMALEPGHVVKESDWPALDTKAARIFKEKQPF 201

Query: 137 LKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKK 196
            +  +S    +++F   K  YK+  + ++   E+ T+YR G   DLCRGPH+++TG++K 
Sbjct: 202 DRLEVSKSDLKKMFAYSK--YKLHYINNLVEGESSTVYRCGTLVDLCRGPHIQNTGKIK- 258

Query: 197 FFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLF 256
             K+M+ + AY+ GD +   L RI G A+  ++++ ++L FLEE+EKR+H ++ ++ DLF
Sbjct: 259 IMKIMQNSAAYFLGDQSNDALQRIRGVAFPDKKQMQEHLKFLEEAEKRNHLRIGKDQDLF 318

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYR 315
              E   G  F    G KIF  L + +R +  K  Y+E+ +P + D  +W+QSGHW  Y+
Sbjct: 319 FFDEVSPGCPFLLPNGTKIFNALQALLRSEYRKRGYQEVQSPNMYDVGIWRQSGHWQHYK 378

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            +MF +        + RT+ALKPMNCPGH  +F H  +SYRELP+R+A+FG ++RNE SG
Sbjct: 379 DDMFKLDI------EKRTWALKPMNCPGHAIMFGHRERSYRELPLRIADFGVLHRNEASG 432

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
           +LHGL R+                   E   + + + +IY  FGF    +KLSTRPEK +
Sbjct: 433 ALHGLTRI-----------------MQEIDGLFDFLRAIYGLFGFS-FKLKLSTRPEKYM 474

Query: 436 GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGT 495
           G    W+ AE+ ++  +   K +  +     V  G+GAFYGPK +  ++DA+ R++QC T
Sbjct: 475 GKLETWNYAEDQLRAAMTKFKGNDWE-----VDEGDGAFYGPKIDVTIQDALKREFQCAT 529

Query: 496 IQVDFNLPSRFNAFYVNSHS---------------------------------------- 515
           IQ+D+ +P  F   Y+   +                                        
Sbjct: 530 IQLDYQMPVNFKLEYMTGETGAKAKPEEKSAGAPAAKTADKPAGDAAKPDVPPTNSDEPG 589

Query: 516 -EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANL 574
             +  PV+IHRA+ GS ERF GI+IE+F G  P WLSP Q ++  +  +  +Y +E+  +
Sbjct: 590 PGRARPVVIHRAIIGSFERFFGIIIEHFGGKWPFWLSPRQILIVPVMPAVNDYVEELQRI 649

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
           LK   L+++ D    T+  KIR   I +   I + G +E S R++ IR     ++Q
Sbjct: 650 LKGDKLNVDIDISGNTMQKKIRTGQIAQYNFIFVVGAQEKSTRTVNIRNRDDPSSQ 705


>gi|296423870|ref|XP_002841475.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295637715|emb|CAZ85666.1| unnamed protein product [Tuber melanosporum]
          Length = 658

 Score =  361 bits (926), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 221/644 (34%), Positives = 334/644 (51%), Gaps = 98/644 (15%)

Query: 4   DIKLTFPDGSI-KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
           DI ++ PDG +        T S +A  IS+SL +K V   ++G V DL  P  + G++E+
Sbjct: 86  DITISLPDGKVVAGKSWETTPSSIARGISKSLFEKTVIAKVDGNVWDLERPFEKSGTLEL 145

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD--FDKEQPFSSDEL 119
           +  EDP    V  HS AH++ EA +  +    + +GP  +DGF+Y+    + +  ++ + 
Sbjct: 146 LDFEDPEGRRVFWHSSAHVLGEAAERRFG-CHLCLGPPTDDGFFYEMGLGEGEVVTATDY 204

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             +E   Q+ I    PF +                          IP   + T+YR G  
Sbjct: 205 KPLETIAQKAIKEKQPFERL-------------------------IPDGTSTTVYRCGPL 239

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLC GPHV +TG++K F ++MK + +Y+ GD+    L RIYG ++  +++L ++   LE
Sbjct: 240 IDLCVGPHVPNTGRIKAF-QVMKNSSSYFLGDAINDSLQRIYGVSFPDKKQLEEHKKLLE 298

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+ KRDHRK+ +E +LF   E   G  F+   G +I+ TL+ Y+R++  K  YEE+ TP 
Sbjct: 299 EAAKRDHRKIGKEQELFFFHELSPGSCFFLPHGTRIYNTLVGYLRQEYWKRGYEEVITPN 358

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           + +  LW+ SGHW +Y+ NMF  +   D       + LKPMNCPGH  +F H  +SYREL
Sbjct: 359 MYNAKLWETSGHWQNYQENMFTFEVEKDK------YGLKPMNCPGHCLLFGHRERSYREL 412

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P R+A+FG ++RNE SG+L GL RVR F QDD HVFCT+EQ+ +E   + + + ++Y   
Sbjct: 413 PWRVADFGVIHRNEFSGALTGLTRVRRFQQDDTHVFCTEEQVGSEIHGLFDFLKTVYGLL 472

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD--TIKNSSQDRINTGVLLGEGAFYG 476
           GF    +KLSTRPEK VG  A WD AE  +   LD  T     +  +N     G+GAFYG
Sbjct: 473 GF-TFKLKLSTRPEKFVGDIATWDSAEAQLTKALDEFTAGGGGKWEMNP----GDGAFYG 527

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK +  + DA+ R+                                 H+++ GS+ERFI 
Sbjct: 528 PKIDITISDALRRE---------------------------------HQSILGSVERFIA 554

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           I+ E+F G  P WLSP Q +V  + ++A  Y  EI  L     L +++ + + T++    
Sbjct: 555 ILTEHFGGKWPFWLSPRQILVIPVMAAANNYVLEIQKL----RLGLDS-YNSTTLS---- 605

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
                    +   G +E   RS+ IR   +  TQ    L  +PI
Sbjct: 606 ---------LAFVGAEEEESRSVNIRNRDNKETQNKGEL--VPI 638


>gi|187921760|ref|YP_001890792.1| threonyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
 gi|187720198|gb|ACD21421.1| threonyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
          Length = 404

 Score =  361 bits (926), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 176/406 (43%), Positives = 259/406 (63%), Gaps = 14/406 (3%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHR +  ++DLFH  E+G G++FWH +GW++++ L  Y+R +++   + EI TPQ+L + 
Sbjct: 5   DHRVIGNKLDLFHQQEEGVGMVFWHPRGWELYRVLEVYVRARMRRAGFREIRTPQLLARS 64

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SGHW+ + A M+++  A++     R   LKPM+CP HV VFN  ++SYRELPVR +
Sbjct: 65  LWEKSGHWEKFGAAMYSLADAEEG----RALCLKPMSCPCHVQVFNQRVRSYRELPVRYS 120

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFG+ +R+EPSGSL GL R R F QDDAHVFCT+ Q+  E  +   L+ ++Y D GF + 
Sbjct: 121 EFGACHRDEPSGSLEGLKRTRAFVQDDAHVFCTEAQIEVEVGRFCALLRTVYADLGFPRF 180

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            V L+TRP  R G D  WD AE+ +         +    +   VL GEGAFYGPK E+ L
Sbjct: 181 KVALATRPAMRAGDDQTWDRAEDALA------NAARAAGLEFEVLEGEGAFYGPKLEFHL 234

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D+  R WQCGTIQ+DF LP R +A +VN  +E+  PVMIH AV GS+ERFI +++E+ +
Sbjct: 235 LDSRARSWQCGTIQLDFVLPERLDAEFVNERNERERPVMIHHAVLGSMERFIAMLLEHHE 294

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G LP+WL+P Q +V TI+ +   YAQE+   L    +    D R E +  KI +   K++
Sbjct: 295 GWLPVWLAPEQVVVATISETNRAYAQEVMQALDDAGVRAVLDSRPERLEKKIVDAREKQV 354

Query: 604 PIIIICGDKEASERSIGIR-RFGSTTTQKVSLLDAIPILTKESLPP 648
           P++++ G ++  +++I IR R G   T  VS ++A+  L   +L P
Sbjct: 355 PLLVVVGSRDERDQTISIRLRDGRQMT--VSFVEAVERLRSMALTP 398


>gi|154278048|ref|XP_001539849.1| threonyl-tRNA synthetase [Ajellomyces capsulatus NAm1]
 gi|150413434|gb|EDN08817.1| threonyl-tRNA synthetase [Ajellomyces capsulatus NAm1]
          Length = 733

 Score =  361 bits (926), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 209/656 (31%), Positives = 336/656 (51%), Gaps = 79/656 (12%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGK-VCDLSDPV-REGSIEIITPEDPRSLAVIRHSCA 78
            T       I + ++   V   ++GK + DL  P+ R+  +  +  +      V  HS A
Sbjct: 83  TTPGSFLRDIPKEISSTVVIAKLDGKELWDLDRPLERDCRVTFLPFDSIEGREVFWHSSA 142

Query: 79  HIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE--QPFSSDELAQIEKKMQEIIARDSPF 136
           H++ EA +  +    ++ GP    GF+YD   E        +   ++ K   I     PF
Sbjct: 143 HVLGEACECYY-GCLLSHGPPTPQGFFYDMALEPGHVVKESDWPALDTKAARIFKEKQPF 201

Query: 137 LKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKK 196
            +  +S    +++F   K  YK+  + ++   E+ T+YR G   DLCRGPH+++TG++K 
Sbjct: 202 DRLEVSKSDLKKMFAYSK--YKLHYINNLVEGESSTVYRCGTLVDLCRGPHIQNTGKIK- 258

Query: 197 FFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLF 256
             K+M+ + AY+ GD +   L RI G A+  ++++ ++L FLEE+EKR+H ++ ++ DLF
Sbjct: 259 IMKIMQNSAAYFLGDQSNDALQRIRGVAFPDKKQMQEHLKFLEEAEKRNHLRIGKDQDLF 318

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYR 315
              E   G  F    G KIF  L + +R +  K  Y+E+ +P + D  +W+QSGHW  Y+
Sbjct: 319 FFDEVSPGCPFLLPNGTKIFNALQALLRSEYRKRGYQEVQSPNMYDVGIWRQSGHWQHYK 378

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            +MF +        + RT+ALKPMNCPGH  +F H  +SYRELP+R+A+FG ++RNE SG
Sbjct: 379 DDMFKLDI------EKRTWALKPMNCPGHAIMFGHRERSYRELPLRIADFGVLHRNEASG 432

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
           +LHGL R+                   E   + + + +IY  FGF    +KLSTRPEK +
Sbjct: 433 ALHGLTRI-----------------MQEIDGLFDFLRAIYGLFGFS-FKLKLSTRPEKYM 474

Query: 436 GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGT 495
           G    W+ AE+ ++  +   K +  +     V  G+GAFYGPK +  ++DA+ R++QC T
Sbjct: 475 GKLETWNYAEDQLRAAMTKFKGNDWE-----VDEGDGAFYGPKIDVTIQDALKREFQCAT 529

Query: 496 IQVDFNLPSRFNAFYVNSHS---------------------------------------- 515
           IQ+D+ +P  F   Y+   +                                        
Sbjct: 530 IQLDYQMPVNFKLEYMTGETGAKAKPEEKSAGAPAAKTADRPAGDAAKPDVPPTNSDEPG 589

Query: 516 -EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANL 574
             +  PV+IHRA+ GS ERF GI+IE+F G  P WLSP Q ++  +  +  +Y +E+  +
Sbjct: 590 PGRARPVVIHRAIIGSFERFFGIIIEHFGGKWPFWLSPRQILIVPVMPAVNDYVEELQRI 649

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
           LK   L+++ D    T+  KIR   I +   I + G +E S R++ IR     ++Q
Sbjct: 650 LKGDKLNVDIDISGNTMQKKIRTGQIAQYNFIFVVGAQEKSTRTVNIRNRDDPSSQ 705


>gi|313678529|ref|YP_004056269.1| threonine--tRNA ligase [Mycoplasma bovis PG45]
 gi|312950500|gb|ADR25095.1| threonine--tRNA ligase [Mycoplasma bovis PG45]
          Length = 582

 Score =  360 bits (925), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 193/586 (32%), Positives = 328/586 (55%), Gaps = 33/586 (5%)

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIAR 132
           + H+ +H++  AV+ ++P V++  GP  ++GFYYDFD  +P S +EL +IEK M+++ +R
Sbjct: 9   LNHTTSHLLGAAVEMLYPNVKLGFGPATDEGFYYDFDFAEPLSENELGKIEKLMKKLASR 68

Query: 133 DSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-ENVTLY-------RQGEWFDLCR 184
           +   +K       + + ++   + YK E+ + + ++ + +T Y       ++  + DLC 
Sbjct: 69  NLVTIKI------SEDEYDFANKPYKKELYDELKSQNKEITFYALQDPLNKEIVFKDLCA 122

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           G H+ ST  +K F KL+ +AGAYWRGDS    L+RIYGT+W T+ EL +YL  L + ++R
Sbjct: 123 GNHIESTKNIKNF-KLLSIAGAYWRGDSKNKQLTRIYGTSWETKDELDKYLALLSDRKER 181

Query: 245 DHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQVLDQ 302
           DHRK+ ++M +F  +   G G   W   G  I   + +  ++   K  + E+ TP    +
Sbjct: 182 DHRKIGKDMKIFTFSPLAGQGFPIWLENGMYIHNEIKNLVLKLDKKYGFTEVLTPHFGAE 241

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            L++ SGH   Y+ +MF     ++      T   +PM CP H+ V+N    SYR+LP+R 
Sbjct: 242 LLYKTSGHLAHYKDDMFKPLLVEN-----ETLIPRPMTCPHHIIVYNTEKHSYRDLPIRY 296

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           +E   +YR E SG+L GL RVRG    + H+F   +Q+ +E  +++  I  I   F  E 
Sbjct: 297 SEQSQLYRYEKSGALTGLERVRGMLLTEGHLFVRYDQIASEVKRMYKQIKEILSIFNIEI 356

Query: 423 IMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
             + LS R     +K   +D++W+ AE +++  L+ +K      +    + GE AFYGPK
Sbjct: 357 SYISLSLRDLNNKDKYFNNDSIWNKAEVMLEKALNDMK------VKYKKVEGEAAFYGPK 410

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +  +  A+G +    TIQ+DF  P +F+  Y++ ++++  P+MIHR + G+ ERF+ I+
Sbjct: 411 IDIQIDTALGHEITVSTIQLDFLQPEKFDLSYIDKNNKEVRPIMIHRGLIGTYERFVAIL 470

Query: 539 IENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +E  KGNLP W++P QA +  +  S  ++YA+++A  L +    ++ D  +E +N KIR 
Sbjct: 471 LEQTKGNLPFWIAPKQATIIPVNLSENLKYAKKVAKKLLNSDFRVKIDDSDERLNKKIRN 530

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             + K    +I G  E +  ++  R +G   T  VS+ D I +L K
Sbjct: 531 AQVSKSKFQLILGSNEMNSNTVSYREYGKEETTTVSINDFIKLLKK 576


>gi|260662523|ref|ZP_05863418.1| threonyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN]
 gi|260553214|gb|EEX26157.1| threonyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN]
          Length = 627

 Score =  360 bits (925), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 198/593 (33%), Positives = 329/593 (55%), Gaps = 24/593 (4%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFS 115
           G++E +  E   SL  +R   A ++   +Q  +  +++      ED F+ D DK+ Q  S
Sbjct: 37  GTVEKVDRESKESLDALRQVAALLLKAVLQDQFKGIRLGEAVAEEDQFFVDSDKDNQQVS 96

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           +DEL  +E+ ++++   +       +S + A +  E   + +  E+L+       V+LY+
Sbjct: 97  ADELEGLERAVKKLAKENLKIELVKVSVDDAVKAVEG--DQFSSELLKENAEDGQVSLYK 154

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
            G+   L + P +     VK   KL+ VAGAYW+G S+ PML RIYGT +  +++L   L
Sbjct: 155 MGDATILAQAPIMLYANLVKNV-KLLSVAGAYWKGMSSNPMLQRIYGTVFFKKEDLEADL 213

Query: 236 YFLEESEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEE 293
              +E+ +RDHR +  ++DLF +  + G+G+ +W  KG  I +T+  Y + +++ D YE 
Sbjct: 214 KARQEARERDHRVIGNQLDLFFVDPKVGAGLPYWMPKGSTIRRTIERYVIDKEVGDGYEH 273

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           + TP +++   ++ SGHWD YR +MF        + D     L+PMNCP H+ ++ H ++
Sbjct: 274 VYTPVLMNLDAYKTSGHWDHYREDMFPPM----DMGDGELLELRPMNCPSHIQIYKHHIR 329

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYRELP+R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  KI  LI+ 
Sbjct: 330 SYRELPLRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQIQDEFAKILKLIMD 389

Query: 414 IYKDFGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL 469
           +YKDF       +LS R     EK   +D +W+ +++++K  +D++       ++     
Sbjct: 390 VYKDFNINDYTFRLSYRDPKNTEKYFANDEMWERSQSMLKAAMDSMG------LDYYEAE 443

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG 529
           GE AFYGPK +   K A+G D    TIQ+DF LP +F+  YV    ++  PVMIHR V G
Sbjct: 444 GEAAFYGPKLDIQTKTALGNDETMSTIQLDFMLPEKFDLHYVGEDGKQHRPVMIHRGVVG 503

Query: 530 SIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRN 588
           ++ERF+  + E +KG  P WL+P Q  +  ++     +YA ++A   ++  L    D R+
Sbjct: 504 TMERFVAYLTEIYKGAFPTWLAPNQVNIIPVSDEKHGDYADDLAREFRAAQLRTVVDHRS 563

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG---STTTQKVSLLDAI 638
           E + YKIRE   +K+P  ++ G+ E +  ++ +R++G     +  K   LD I
Sbjct: 564 EKMGYKIRESQTQKVPYTLVVGEDEVANGTVSVRKYGEKDQVSMSKQDFLDLI 616


>gi|78060370|ref|YP_366945.1| threonyl-tRNA synthetase, class IIA [Burkholderia sp. 383]
 gi|77964920|gb|ABB06301.1| Threonyl-tRNA synthetase, class IIa [Burkholderia sp. 383]
          Length = 477

 Score =  359 bits (922), Expect = 7e-97,   Method: Compositional matrix adjust.
 Identities = 175/413 (42%), Positives = 256/413 (61%), Gaps = 17/413 (4%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQH 303
           DHR L  ++ LFH  ++G G++FWH +GW +++ L  Y+R +++   + EI TPQ+L + 
Sbjct: 71  DHRILGNKLGLFHQQQEGPGMVFWHPRGWALYRVLEDYVRMRMRRAGFREIRTPQLLARS 130

Query: 304 LWQQSGHWDSYRANMFAVK-------CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           LW++SGHWD + + M+A+         AD    D     LKPM+CP HV VFN GL+SYR
Sbjct: 131 LWERSGHWDKFGSQMYALPDRSPIEPSADVDHDDALALCLKPMSCPCHVQVFNQGLRSYR 190

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ELP+R +EFG+ +R+EPSGSL GL R R F QDDAHVFCTK Q+ NE  +  NL+ ++Y 
Sbjct: 191 ELPIRYSEFGACHRDEPSGSLEGLKRTRAFVQDDAHVFCTKSQIENEVARFCNLLRAVYA 250

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           D GF  + V L+TRP +R G +A+WD      +        +    +   +  GEGAFYG
Sbjct: 251 DLGFSSVTVALATRPMQRAGEEAVWD------QAEASLAAAARAAGLEFELSEGEGAFYG 304

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK E+ L D  GR+WQCGTIQ+DF LP R NA ++N+ + +  PVM+H AV GS+ERFI 
Sbjct: 305 PKLEFKLADRRGREWQCGTIQLDFVLPGRLNAHFINAENVQETPVMLHHAVLGSMERFIA 364

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           I++E+++G LP+WL+P Q +V +I+ +   YA  +  +L    L +  D R E +  KI 
Sbjct: 365 ILLEHYEGWLPVWLAPEQIVVASISDAHAPYAMRVVQMLDDAGLRVVADCRAERLERKII 424

Query: 597 EHSIKKIPIIIICGDKEASERSIGIR-RFGSTTTQKVSLLDAIPILTKESLPP 648
           +    +IP +I  G ++    ++ IR R G   T  + L +AI +L+ E+  P
Sbjct: 425 DARKLQIPFLIAVGARDERNGTVSIRNRNGDQVT--LPLDEAITVLSCEAKAP 475


>gi|319653813|ref|ZP_08007907.1| threonyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
 gi|317394349|gb|EFV75093.1| threonyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
          Length = 399

 Score =  358 bits (920), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 182/407 (44%), Positives = 261/407 (64%), Gaps = 14/407 (3%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQ 298
           E+EK +HRKL +E++LF   E+  G+ F+   G  +   L SY RRK  +  Y+EI TP 
Sbjct: 2   EAEKINHRKLGQELELFTSMEEAPGMPFFLPNGMVMRNELESYWRRKHQRAGYQEIKTPI 61

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++ Q LW+QSGHW+ Y  NM+          D + +A+KPMNCPG + VFN   +SYREL
Sbjct: 62  MMKQELWEQSGHWNHYHENMYFSNV------DEQNYAIKPMNCPGAILVFNSKRRSYREL 115

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R AE G V+R+E SGSL+GL+RVR FTQDDAH+F   +Q+  E  KI  LI   Y  F
Sbjct: 116 PLRYAELGLVHRHELSGSLNGLLRVRSFTQDDAHLFVMADQIEAEIDKILVLIDEFYSHF 175

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+   V+LSTRPE+ +GS  +W+ AE  ++ VL   KN     +N  +  G+GAFYGPK
Sbjct: 176 GFD-YKVELSTRPEEYMGSQEMWERAEGALESVL---KNKG---VNYQINPGDGAFYGPK 228

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++ + D++GR WQCGTIQ+DF +P +FN  YV   ++   P+MIHRA+FGS+ERF+ I+
Sbjct: 229 IDFHILDSLGRSWQCGTIQLDFQMPQKFNCAYVGEDNKLHLPIMIHRAIFGSVERFMAIL 288

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+F G+ PLWLSP+QA +  I+ S  EYA  + + L+   +  E DFR E +  KIRE 
Sbjct: 289 IEHFAGDFPLWLSPVQAKIIPISDSHAEYADYVKSQLEEAGIRAEADFRTEKMGLKIREA 348

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           + +K+P +++ GDKE  ++S+ +R+        +S+ D I     E+
Sbjct: 349 AKQKVPYMLVIGDKEMEQQSLSLRKRKEGNIGVMSIKDVIERFINET 395


>gi|114559273|ref|XP_001168878.1| PREDICTED: threonyl-tRNA synthetase-like 1 isoform 6 [Pan
           troglodytes]
          Length = 684

 Score =  358 bits (920), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 221/638 (34%), Positives = 330/638 (51%), Gaps = 62/638 (9%)

Query: 2   PSDIKLTFPDGS-IKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
           P  IK++ P G  I     + T   +A  IS +LA  AVA  +NG+  DL  P+   S +
Sbjct: 58  PRTIKISLPGGQKIDAVAWNTTPYQLARQISSTLADTAVAAQVNGEPYDLERPLETDSDL 117

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF--DKEQPFSSD 117
             +T + P   AV  HS  H++  A +     V +  GP  E GFY+DF   KE+     
Sbjct: 118 RFLTFDSPEGKAVFWHSSTHVLGAAAEQFLGAV-LCRGPSTEYGFYHDFFLGKERTIRGS 176

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           EL  +E+  QE+ A   PF +   S ++ R+LF  K   +K+ ++E        T+Y  G
Sbjct: 177 ELPVLERICQELTAAARPFRRLEASRDQLRQLF--KDNPFKLHLIEEKVTGPTATVYGCG 234

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
              DLC+GPH+R TGQ+     L   +  +    +    L R+ G ++ T + L  +  +
Sbjct: 235 TLVDLCQGPHLRHTGQIGGLKLLSNSSSLWRSSGAPE-TLQRVSGISFPTTELLRAWEAW 293

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
            EE+E RDHR++ +E +LF   E   G  F+  +G +++  L++++R +     + E+ T
Sbjct: 294 REEAELRDHRRIGKEQELFFFHELSPGSCFFLPRGTRVYNALVAFIRAEYAHRGFSEVKT 353

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKC----------ADDTIKDLR-TFALKPMNCPGHV 345
           P +    LW+QSGHW+ Y+ +MFAV+           +DD+ + +  T ALKPMNCP H 
Sbjct: 354 PTLFSTKLWEQSGHWEHYQEDMFAVQPPGSDRPPSSQSDDSTRHITDTLALKPMNCPAHC 413

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +F H  +S+RELP+RLA+FG+++R E SG L GL R+R F QDDAH+FCT +Q+  E  
Sbjct: 414 LMFAHRPRSWRELPLRLADFGALHRAEASGGLGGLTRLRCFQQDDAHIFCTTDQLEAEIQ 473

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
              + + S+Y   GF    + LSTRP   +G   LWD AE ++K  L          +N+
Sbjct: 474 SCLDFLRSVYAVLGF-SFRLALSTRPSGFLGDPCLWDQAEQVLKQALKEFGEPWD--LNS 530

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
               G+GAFYGPK +  L DA+GR  QCGTIQ+DF LP RF+  Y               
Sbjct: 531 ----GDGAFYGPKIDVHLHDALGRPHQCGTIQLDFQLPLRFDLQY--------------- 571

Query: 526 AVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD 585
                            KG  PLWLSP Q +V  + S   EYA+E    L++  L  + D
Sbjct: 572 -----------------KG--PLWLSPFQVVVIPVGSEQEEYAKEAQQSLRAAGLVSDLD 612

Query: 586 FRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
             +  T++ +IR   +       + G KE S+R++ IR
Sbjct: 613 ADSGLTLSRRIRRAQLAHYNFQFVVGQKEQSKRTVNIR 650


>gi|297697604|ref|XP_002825941.1| PREDICTED: probable threonyl-tRNA synthetase 2, cytoplasmic-like
           [Pongo abelii]
          Length = 707

 Score =  358 bits (918), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 185/455 (40%), Positives = 269/455 (59%), Gaps = 17/455 (3%)

Query: 171 VTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQE 230
            T+YR G   DLC+GPHVR TG++K   K+ K +  YW G+     L RIYG ++   + 
Sbjct: 233 TTVYRCGPLIDLCKGPHVRHTGKIKTI-KIFKNSSTYWEGNPEMETLQRIYGISFPDNKM 291

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KD 289
           +  +  F EE++ RDHRK+ +E +LF   +   G  F+  +G  I+ TL  ++R +  K 
Sbjct: 292 MRNWEKFQEEAKNRDHRKIGKEQELFFFHDLSPGSCFFLPRGAFIYNTLTDFIREEYHKR 351

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
           D+ E+ +P + +  LW+ SGHW  Y  NMF  +   DT      FALKPMNCPGH  +F 
Sbjct: 352 DFTEVLSPNMYNSKLWEASGHWQHYSENMFTFEIEKDT------FALKPMNCPGHCLMFA 405

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
           H  +S+RE+P+R A+FG ++RNE SG+L GL RVR F QDDAH+FCT EQ+  E      
Sbjct: 406 HRPRSWREMPIRFADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCTVEQIEEEIKGCLQ 465

Query: 410 LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL 469
            + S+Y  FGF    + LSTRPE  +G   +W++AE  ++  L  +      ++N     
Sbjct: 466 FLQSVYSTFGF-SFQLNLSTRPENFLGEIEMWNEAEKQLQNSL--MDFGEPWKMNP---- 518

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVF 528
           G+GAFYGPK +  +KDAIGR  QC TIQ+DF LP RFN  YV+    +K  PV+IHRA+ 
Sbjct: 519 GDGAFYGPKIDIKIKDAIGRYHQCATIQLDFQLPIRFNLTYVSKDGDDKKRPVIIHRAIL 578

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF-R 587
           GS+ER I I+ EN+ G  P WLSP Q +V  +  +  +YA ++++         + D   
Sbjct: 579 GSVERMIAILSENYGGKWPFWLSPRQVMVIPVGPTCEKYALQVSSEFFEEGFMADVDLDH 638

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           N T+N KIR   + +   I++ G+KE  + ++ +R
Sbjct: 639 NCTLNKKIRNAQLAQYNFILVVGEKEKIDNAVNVR 673


>gi|153824261|ref|ZP_01976928.1| threonyl-tRNA synthetase [Vibrio cholerae B33]
 gi|126518216|gb|EAZ75441.1| threonyl-tRNA synthetase [Vibrio cholerae B33]
          Length = 345

 Score =  357 bits (916), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 167/342 (48%), Positives = 244/342 (71%), Gaps = 12/342 (3%)

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYR 175
           ++L +IE +M E+       +K+ +S ++AR+ FES+ E+YK+EIL E++   +   LY 
Sbjct: 2   EDLEKIEARMVELAKTKYAVVKKKVSWQEARDTFESRGESYKMEILDENVARDDRPGLYH 61

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
             E+ D+CRGPHV   G  + F KL+ +AGAYWRG+S+  ML RIYGTA++ ++ L  +L
Sbjct: 62  HEEYIDMCRGPHVPHMGFCQNF-KLLNIAGAYWRGNSDNKMLQRIYGTAFHDKKALQAHL 120

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEI 294
             LEE+ KRDHRK+ +++DLFH+ ++  G++FWH  GW IF+ L  ++R+K+ +  Y+E+
Sbjct: 121 TRLEEAAKRDHRKIGKQLDLFHMQQEAPGMVFWHHNGWSIFRDLEIFIRQKLNEYGYQEV 180

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
             P ++D+ LW++SGHWD Y   MF       T  + R +A+KPMNCPGH+ +FN GLKS
Sbjct: 181 KGPLMMDRVLWERSGHWDKYADAMFT------TSSENREYAIKPMNCPGHIQIFNQGLKS 234

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YR+LP+R+AEFGS +RNEPSGSLHG+MRVRGFTQDDAH+FCT++Q+  E      ++   
Sbjct: 235 YRDLPLRMAEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTEDQIQQEVTSCIKMVYDT 294

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIK 456
           Y  FGF+ I+VKLSTRPEKRVGSD +WD +E   + ++D++K
Sbjct: 295 YTTFGFQNIVVKLSTRPEKRVGSDEIWDKSE---QALIDSLK 333


>gi|114659241|ref|XP_001144153.1| PREDICTED: hypothetical protein [Pan troglodytes]
 gi|332844841|ref|XP_001144319.2| PREDICTED: probable threonyl-tRNA synthetase 2, cytoplasmic isoform
           1 [Pan troglodytes]
          Length = 707

 Score =  357 bits (916), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 185/455 (40%), Positives = 269/455 (59%), Gaps = 17/455 (3%)

Query: 171 VTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQE 230
            T+YR G   DLC+GPHVR TG++K   K+ K +  YW G+     L RIYG ++   + 
Sbjct: 233 TTVYRCGPLIDLCKGPHVRHTGKIKTI-KIFKNSSTYWEGNPEMETLQRIYGISFPDNKM 291

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KD 289
           +  +  F EE++ RDHRK+ +E +LF   +   G  F+  +G  I+ TL  ++R +  K 
Sbjct: 292 MRDWEKFQEEAKNRDHRKIGKEQELFFFHDLSPGSCFFLPRGAFIYNTLTDFIREEYHKR 351

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
           D+ E+ +P + +  LW+ SGHW  Y  NMF  +   DT      FALKPMNCPGH  +F 
Sbjct: 352 DFTEVLSPNMYNSKLWEASGHWQHYSENMFTFEIEKDT------FALKPMNCPGHCLMFA 405

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
           H  +S+RE+P+R A+FG ++RNE SG+L GL RVR F QDDAH+FCT EQ+  E      
Sbjct: 406 HRPRSWREMPIRFADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCTVEQIEEEIKGCLR 465

Query: 410 LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL 469
            + S+Y  FGF    + LSTRPE  +G   +W++AE  ++  L  +      ++N     
Sbjct: 466 FLQSVYSTFGF-SFQLNLSTRPENFLGEIEMWNEAEKQLQNSL--MDFGEPWKMNP---- 518

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVF 528
           G+GAFYGPK +  +KDAIGR  QC TIQ+DF LP RFN  YV+    +K  PV+IHRA+ 
Sbjct: 519 GDGAFYGPKIDIKIKDAIGRYHQCATIQLDFQLPIRFNLTYVSKDGDDKKRPVIIHRAIL 578

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF-R 587
           GS+ER I I+ EN+ G  P WLSP Q +V  +  +  +YA ++++         + D   
Sbjct: 579 GSVERMIAILSENYGGKWPFWLSPRQVMVIPVGPTCEKYALQVSSEFFEEGFMADVDLDH 638

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           N T+N KIR   + +   I++ G+KE  + ++ +R
Sbjct: 639 NCTLNKKIRNAQLAQYNFILVVGEKEKIDNAVNVR 673


>gi|146340273|ref|YP_001205321.1| putative threonine tRNA synthetase (fragment) [Bradyrhizobium sp.
           ORS278]
 gi|146193079|emb|CAL77090.1| putative threonine tRNA synthetase (fragment) [Bradyrhizobium sp.
           ORS278]
          Length = 409

 Score =  357 bits (916), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 174/405 (42%), Positives = 247/405 (60%), Gaps = 14/405 (3%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHR L   +DL+HI ED  G++FWH +G  +++ L +++R K++   Y E+ TPQ+L   
Sbjct: 5   DHRSLGPRLDLWHIQEDAPGMVFWHPRGHALYRVLENFIRGKMRRLGYAEVRTPQLLPLD 64

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW QSGHW+ + A MFA+   +      R  ALKPM+CP HV +FN  L+S+RELP+R A
Sbjct: 65  LWMQSGHWEKFGAQMFALGEGE------RAMALKPMSCPCHVQIFNRNLRSWRELPLRYA 118

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +R+EPSG+LHGLMR RGF QDDAHVFC  + +  E  +   L+  +Y  FGF+  
Sbjct: 119 EFGSCHRDEPSGALHGLMRTRGFEQDDAHVFCRADDVAGEVARFAALLSEVYAAFGFDAP 178

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            V LSTRP+ R GSDA WD AE  +     +        ++  +  GEGAFYGPK E+ L
Sbjct: 179 EVSLSTRPQLRAGSDASWDWAEQALAEAARSCG------LSYAIQPGEGAFYGPKLEFAL 232

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D +GR WQCGT+Q+D  LP R  A YV +H  +  PV+IH AV GSI RFI +++E+  
Sbjct: 233 RDRLGRSWQCGTVQLDSVLPERLGASYVAAHGARATPVLIHHAVLGSIGRFIAMLLEHHA 292

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G LP WLSP Q  V  IT   ++ A ++  LL S  L        ET++ +I       I
Sbjct: 293 GALPFWLSPDQVAVVPITRDQLDDALKLRELLFSAELRAVLSADGETLSRRIVAAHAASI 352

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
           P++ + G +EA++ ++ +R    TT+  ++   A+  L + + PP
Sbjct: 353 PVVAVVGAREAAQGTVSLRERDGTTS-VLTWDRAVSTLRERNRPP 396


>gi|149030652|gb|EDL85689.1| threonyl-tRNA synthetase-like 1, isoform CRA_a [Rattus norvegicus]
          Length = 617

 Score =  357 bits (915), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 216/641 (33%), Positives = 320/641 (49%), Gaps = 89/641 (13%)

Query: 5   IKLTFPDGS-IKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           IK++ P+G  +     + T   +A+ IS +LA  AVA  +NG++ DL  P+  +  +  +
Sbjct: 9   IKISLPEGQKVDAVAWNTTPYQLAQQISSTLADTAVAAEVNGELYDLDRPLETDCHLRFL 68

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF--DKEQPFSSDELA 120
           T + P   AV   S AH++  A +     V +  GP  E GFY DF   KE+   S EL 
Sbjct: 69  TFDSPEGKAVFWRSSAHVLGAAAEQHLGAV-LCRGPSTESGFYLDFFLGKERTVRSTELP 127

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            +E+  QEII    PF +   S  + R+LF  K   +K+ ++E        T+Y  G   
Sbjct: 128 TLERICQEIITAAQPFRRLEASRGQLRQLF--KDNHFKLHVIEEKVTGTTATVYGCGMSV 185

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLC+GPH+R TGQ+                                              
Sbjct: 186 DLCQGPHLRHTGQIGAL------------------------------------------- 202

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQV 299
                  KL  E +LF   E   G  F+  +G +I+  L++++R +  +  + E+ TP +
Sbjct: 203 -------KLLTEQELFFFHELSPGSCFFLPRGTRIYNALVAFIRAEYARRGFSEVKTPTL 255

Query: 300 LDQHLWQQSGHWDSYRANMFAVK-----------------CADDTIKDLRTFALKPMNCP 342
               LW+QSGHW+ YRA+MF++K                 C  DT+      ALKPMNCP
Sbjct: 256 FSTKLWEQSGHWEHYRAHMFSLKPPGTDGVDSSQSGHPARCPKDTL------ALKPMNCP 309

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN 402
            H  +F H  +S+RELPVRLA+FG ++R E SGSL GL R+  F QDDAH+FC   Q+  
Sbjct: 310 AHCLMFAHRPRSWRELPVRLADFGVLHRAEASGSLGGLTRLWRFQQDDAHIFCAPSQLEA 369

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
           E     + + S+Y   GF    + LSTRP   +G   LWD AE +++  L+         
Sbjct: 370 EIRGCLDFLRSVYSVLGF-SFHLALSTRPPGFLGEPHLWDQAEKVLQQALEEFGEPWN-- 426

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
           +N G    +GAFYGPK +  L DA+GR  QCGTIQ+DF LP RF+  Y         PV+
Sbjct: 427 LNPG----DGAFYGPKIDVHLHDALGRPHQCGTIQLDFQLPLRFDLQYKGPAGAPECPVL 482

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSI 582
           IHRAV GS+ER +G++ E+  G  PLWLSP Q +V  + +   +YA+++   L++  L  
Sbjct: 483 IHRAVLGSVERLLGVLAESCGGRWPLWLSPFQVVVIPVRTEQEDYARQVQQCLQAAGLVS 542

Query: 583 ETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           + D     T++ ++R   +       + G +E S+ S+ +R
Sbjct: 543 DLDADCGLTLSRRVRRAQLAHYNFQFVVGQREQSQMSVNVR 583


>gi|299783724|gb|ADJ41722.1| Threonyl-tRNA synthase [Lactobacillus fermentum CECT 5716]
          Length = 601

 Score =  356 bits (914), Expect = 7e-96,   Method: Compositional matrix adjust.
 Identities = 196/593 (33%), Positives = 332/593 (55%), Gaps = 21/593 (3%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFS 115
           G++E +  E   SL  +R   A ++  A+Q  +  +++      ED F+ D DK+ Q  S
Sbjct: 11  GTVEKVDRESKESLDALRQVAALLLKAALQDQFKGIRLGEAVAEEDQFFVDSDKDNQQVS 70

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           +DEL  +E+ ++++   +       +S + A +  E   + +  E+L+       V+LY+
Sbjct: 71  ADELEGLERAVKKLAKENLKIELVKVSVDDAVKAVEG--DQFSSELLKENAEDGQVSLYK 128

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
            G+   L + P +     VK   KL+ VAGAYW+G S+ PML RIYGT +  +++L   L
Sbjct: 129 MGDATILAQAPIMLYANLVKNV-KLLSVAGAYWKGMSSNPMLQRIYGTVFFKKEDLEADL 187

Query: 236 YFLEESEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEE 293
              +E+ +RDHR +  ++DLF +  + G+G+ +W  KG  I +T+  Y + +++ D YE 
Sbjct: 188 KARQEARERDHRVIGNQLDLFFVDPKVGAGLPYWMPKGSTIRRTIERYVIDKEVGDGYEH 247

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           + TP +++ + ++ SGHWD YR +MF        + D     L+PMNCP H+ ++ H ++
Sbjct: 248 VYTPVLMNLNAYKTSGHWDHYREDMFPPM----DMGDGELLELRPMNCPSHIQIYKHHIR 303

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYRELP+R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  KI  LI+ 
Sbjct: 304 SYRELPLRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQIQDEFAKILKLIMD 363

Query: 414 IYKDFGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL 469
           +YKDF       +LS R     EK   +D +W+ +++++K  +D++       ++     
Sbjct: 364 VYKDFNINDYTFRLSYRDPKNTEKYFANDEMWERSQSMLKAAMDSMG------LDYYEAE 417

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG 529
           GE AFYGPK +   K A+G D    TIQ+DF LP +F+  YV    ++  P+MIHR V G
Sbjct: 418 GEAAFYGPKLDIQTKTALGNDETMSTIQLDFMLPEKFDLHYVGEDGKQHRPIMIHRGVVG 477

Query: 530 SIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRN 588
           ++ERF+  + E +KG  P WL+P Q  +  ++     +YA ++A   ++  L    D R+
Sbjct: 478 TMERFVAYLTEIYKGAFPTWLAPNQVNIIPVSDEKHGDYADDLAREFRAAQLRTVVDHRS 537

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           E + YKIRE   +K+P  ++ G+ E +  ++ +R++G      +S  D + ++
Sbjct: 538 EKMGYKIRESQTQKVPYTLVVGEDEVANGTVSVRKYGEKDQVSMSKQDFLDLI 590


>gi|158340035|ref|YP_001521204.1| threonyl-tRNA synthetase [Acaryochloris marina MBIC11017]
 gi|158310276|gb|ABW31891.1| threonyl-tRNA synthetase [Acaryochloris marina MBIC11017]
          Length = 439

 Score =  356 bits (913), Expect = 7e-96,   Method: Compositional matrix adjust.
 Identities = 172/416 (41%), Positives = 262/416 (62%), Gaps = 14/416 (3%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E++  DHR+LAR+MDLFH  E   G++FWH +G ++F+++  +MR+  +   +EE+ +P 
Sbjct: 30  ETKMADHRELARDMDLFHFEEHSPGMVFWHPQGLRLFRSIEDFMRQVYQGHGFEEVRSPI 89

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT-------FALKPMNCPGHVAVFNHG 351
            L++ LW++S HW+ +R  MF V   +  I D          +ALKPM+CP H+A++   
Sbjct: 90  ALNRSLWERSRHWEKFRQGMFVVGSVEADIDDESALSVISPDYALKPMSCPAHIAIYQSR 149

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI 411
            +SYRE P+RL EFG  +RNE SG+L G MR+R F QDDAH+FC    +  E     N++
Sbjct: 150 KRSYRENPMRLMEFGICHRNELSGTLSGCMRLRQFVQDDAHIFCRASDVQREISNFLNMV 209

Query: 412 ISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
             +Y  FG+++  +++S RPE+R+GSD LWD AE+++   + ++ +S +   N      E
Sbjct: 210 QQVYVAFGYDQFSLQISLRPEQRLGSDHLWDQAESVLVKAVQSLGHSYKLAPN------E 263

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
           GAFYGPK E  L+D +GR WQCGTIQVDFNLP  F   +VN   E   PVM+H+A+ GS+
Sbjct: 264 GAFYGPKLEISLQDQLGRSWQCGTIQVDFNLPQVFELAFVNELGELERPVMLHQAILGSL 323

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           ER+IGI++E+  G LP+W +P Q  V +I++ A  +A+ I   L+     +E   +N TI
Sbjct: 324 ERWIGILLEHHSGALPIWAAPTQVAVASISNKASAWAETIFFRLRQLGARVELHNQNRTI 383

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLP 647
           + KIR  S +KIP+I I G++EA  + + +R  G+   Q++SL +    L   S+P
Sbjct: 384 SKKIRGLSKRKIPLIAIVGEQEAMSQRLNLRCLGALKQQEMSLAELEQKLADLSMP 439


>gi|16552114|dbj|BAB71241.1| unnamed protein product [Homo sapiens]
          Length = 707

 Score =  356 bits (913), Expect = 7e-96,   Method: Compositional matrix adjust.
 Identities = 184/455 (40%), Positives = 269/455 (59%), Gaps = 17/455 (3%)

Query: 171 VTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQE 230
            T+YR G   DLC+GPHVR TG++K   K+ K +  YW G+     L RIYG ++   + 
Sbjct: 233 TTVYRCGPLIDLCKGPHVRHTGKIKTI-KIFKNSSTYWEGNPEMETLQRIYGISFPDNKM 291

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KD 289
           +  +  F EE++ RDHRK+ +E +LF   +   G  F+  +G  I+ TL  ++R +  K 
Sbjct: 292 MRDWEKFQEEAKNRDHRKIGKEQELFFFHDLSPGSCFFLPRGAFIYNTLTDFIREEYHKR 351

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
           D+ E+ +P + +  LW+ SGHW  Y  NMF  +   DT      FALKPMNCPGH  +F 
Sbjct: 352 DFTEVLSPNMYNSKLWEASGHWQHYSENMFTFEIEKDT------FALKPMNCPGHCLMFA 405

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
           H  +S+RE+P+R A+FG ++RNE SG+L GL RVR F QDDAH+FCT EQ+  E      
Sbjct: 406 HRPRSWREMPIRFADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCTVEQIEEEIKGCLQ 465

Query: 410 LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL 469
            + S+Y  FGF    + LSTRPE  +G   +W++AE  ++  L  +      ++N     
Sbjct: 466 FLQSVYSTFGF-SFQLNLSTRPENFLGEIEMWNEAEKQLQNSL--MDFGEPWKMNP---- 518

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVF 528
           G+GAFYGPK +  +KDAIGR  QC TIQ+DF LP RFN  YV+    +K  PV+IHRA+ 
Sbjct: 519 GDGAFYGPKIDIKIKDAIGRYHQCATIQLDFQLPIRFNLTYVSKDGDDKKRPVIIHRAIL 578

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRN 588
           GS+ER I I+ EN+ G  P WLSP Q +V  +  +  +YA ++++         + D  +
Sbjct: 579 GSVERMIAILSENYGGKWPFWLSPRQVMVIPVGPTCEKYALQVSSEFFEEGFMADVDLDH 638

Query: 589 E-TINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
             T+N KIR   + +   I++ G+KE  + ++ +R
Sbjct: 639 SCTLNKKIRNAQLAQYNFILVVGEKEKIDNAVNVR 673


>gi|302816173|ref|XP_002989766.1| hypothetical protein SELMODRAFT_447798 [Selaginella moellendorffii]
 gi|300142543|gb|EFJ09243.1| hypothetical protein SELMODRAFT_447798 [Selaginella moellendorffii]
          Length = 564

 Score =  356 bits (913), Expect = 9e-96,   Method: Compositional matrix adjust.
 Identities = 200/578 (34%), Positives = 315/578 (54%), Gaps = 53/578 (9%)

Query: 55  REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE--DGFYYD--FDK 110
           ++ + + +  +D +      HS AHI+ E+++  +   ++ IGP     +GFYYD  ++ 
Sbjct: 9   KKKAADYVIAQDEQGRDTFWHSSAHILGESLEQAYG-CKLCIGPCTTRGEGFYYDAFYED 67

Query: 111 EQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN 170
            +  + +    ++ ++ + +    PF +  ++ ++A E+F   +  +KVEI+  +P    
Sbjct: 68  GRTLNEENFPAVQSQVTKAVQESQPFERIQVTRQQALEIFSDNQ--FKVEIINDLPEDAV 125

Query: 171 VTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQE 230
           +T+YR G   DLCRGPH+ +T  VK F  L     AY                       
Sbjct: 126 ITVYRCGPLVDLCRGPHIPNTSYVKAFSCLK----AY----------------------- 158

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KD 289
           +T+Y    EE++KRDHR L +   LF   E   G  F+  KG  ++  L+ ++R +  K 
Sbjct: 159 MTKY----EEAKKRDHRLLGKNQQLFFFHELSPGSAFFLPKGTIVYNKLLQFIRSEYRKR 214

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
            ++E+ TP + +  LW+QSGH   Y+ NMF  +       + + F LKPMNCPGH  +F 
Sbjct: 215 GFDEVVTPNIYNMKLWEQSGHAAHYKENMFVFEI------EKQEFGLKPMNCPGHCLLFQ 268

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
           H ++SYRELP+R+A+FG ++RNE SG+L GL RVR F+QDDAH+FC + Q+++E     +
Sbjct: 269 HRVRSYRELPLRIADFGVLHRNELSGALTGLTRVRRFSQDDAHIFCMESQVYDEVKGCLD 328

Query: 410 LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL 469
            +  +Y  FGF    +KLSTRPE  +G  +LWD AE  +   L+      Q  +N     
Sbjct: 329 FLDYVYTIFGF-TYDLKLSTRPENFLGESSLWDRAEGALADALNAHAKPWQ--MNE---- 381

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC-HPVMIHRAVF 528
           G+GAFYGPK +  + DA+ R +QC TIQ+DF  P RF   Y      K   PV+IHRA+ 
Sbjct: 382 GDGAFYGPKIDIQVSDALNRKFQCATIQLDFQSPIRFKLSYSAEDEAKIERPVIIHRAIL 441

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRN 588
           GSIER   I++E+  G  P WLSP QAIV TI+    +YA+E+   L +    ++ D  +
Sbjct: 442 GSIERMFAILLEDNAGKWPFWLSPRQAIVLTISEKFKDYAEEVRAKLHAAGFEVDVDVSD 501

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS 626
             ++ K+RE  +     +++ G  E  +  + +R  GS
Sbjct: 502 RKVDKKVREAQMAHYNYLLVVGAMEQEKGEVNVRTRGS 539


>gi|255066457|ref|ZP_05318312.1| threonine--tRNA ligase [Neisseria sicca ATCC 29256]
 gi|255049337|gb|EET44801.1| threonine--tRNA ligase [Neisseria sicca ATCC 29256]
          Length = 322

 Score =  355 bits (912), Expect = 9e-96,   Method: Compositional matrix adjust.
 Identities = 159/297 (53%), Positives = 213/297 (71%), Gaps = 6/297 (2%)

Query: 327 TIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
           T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+RLAEFGS +RNEPSG+LHGLMRVRGF
Sbjct: 4   TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALHGLMRVRGF 63

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
            QDDAH+FCT++Q+ +E    + L++ IYK FGF  + VKLS RPEKR GSD +WD AE 
Sbjct: 64  VQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFHDVSVKLSLRPEKRAGSDDVWDKAEQ 123

Query: 447 IMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF 506
            ++  L          +    L GEGAFYGPK EY +KDA+GR WQCGT+Q+DF LP R 
Sbjct: 124 GLREALTACG------VEWDELPGEGAFYGPKIEYHVKDALGRSWQCGTLQLDFVLPERL 177

Query: 507 NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVE 566
           +A YV  ++++  PVM+HRA+ GS+ERFIGI+IEN  G+ PLWL+P+Q ++  IT +  +
Sbjct: 178 DAEYVTENNDRARPVMLHRAILGSLERFIGILIENHAGSFPLWLAPVQMVIMNITENQAD 237

Query: 567 YAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRR 623
           Y +E+A  L++    +E D RNE I YKIR++S  + P  I+ GDKE  E  + +RR
Sbjct: 238 YCREVAAKLQAAGFRVELDLRNEKIGYKIRDNSQYRFPYQIVVGDKEKQENKVAVRR 294


>gi|184156306|ref|YP_001844646.1| threonyl-tRNA synthase [Lactobacillus fermentum IFO 3956]
 gi|183227650|dbj|BAG28166.1| threonyl-tRNA synthase [Lactobacillus fermentum IFO 3956]
          Length = 634

 Score =  355 bits (912), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 199/593 (33%), Positives = 330/593 (55%), Gaps = 24/593 (4%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFS 115
           G++E +  E   SL  +R   A ++  A+Q  +  +++      ED F+ D DK+ Q  S
Sbjct: 44  GTVEKVDRESKESLDALRQVAALLLKAALQDQFKGIRLGEAVAEEDQFFVDSDKDNQQVS 103

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           +DEL  +E+ ++++   +       +S + A +  E   + +  E+L+       V+LY+
Sbjct: 104 ADELEGLERAVKKLAKENLKIELVKVSVDDAVKAVEG--DQFSSELLKENAEDGQVSLYK 161

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
            G+   L + P +     VK   KL+ VAGAYW+G S+ PML RIYGT +  +++L   L
Sbjct: 162 MGDATILAQAPIMLYANLVKNV-KLLSVAGAYWKGMSSNPMLQRIYGTVFFKKEDLEADL 220

Query: 236 YFLEESEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEE 293
              +E+ +RDHR +  ++DLF +  + G+G+ +W  KG  I +T+  Y + +++ D YE 
Sbjct: 221 KARQEARERDHRVIGNQLDLFFVDPKVGAGLPYWMPKGSTIRRTIERYVIDKEVGDGYEH 280

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           + TP +++   ++ SGHWD YR +MF        + D     L+PMNCP H+ ++ H ++
Sbjct: 281 VYTPVLMNLDAYKTSGHWDHYREDMFPPM----DMGDGELLELRPMNCPSHIQIYKHHIR 336

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYRELP+R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  KI  LI+ 
Sbjct: 337 SYRELPLRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQIQDEFAKILKLIMD 396

Query: 414 IYKDFGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL 469
           +YKDF       +LS R     EK   +D +W+ +++++K  +D++       ++     
Sbjct: 397 VYKDFNINDYTFRLSYRDPKNTEKYFANDEMWERSQSMLKAAMDSMG------LDYYEAE 450

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG 529
           GE AFYGPK +   K A+G D    TIQ+DF LP +F+  YV    ++  PVMIHR V G
Sbjct: 451 GEAAFYGPKLDIQTKTALGNDETMSTIQLDFMLPEKFDLHYVGEDGKQHRPVMIHRGVVG 510

Query: 530 SIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRN 588
           ++ERF+  + E +KG  P WL+P Q  +  ++     +YA ++A   ++  L    D R+
Sbjct: 511 TMERFVAYLTEIYKGAFPTWLAPNQVNIIPVSDEKHGDYADDLAREFRAAQLRTVVDHRS 570

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG---STTTQKVSLLDAI 638
           E + YKIRE   +K+P  ++ G+ E +  ++ +R++G     +  K   LD I
Sbjct: 571 EKMGYKIRESQTQKVPYTLVVGEDEVANGTVSVRKYGEKDQVSMSKQDFLDLI 623


>gi|227514102|ref|ZP_03944151.1| threonine--tRNA ligase [Lactobacillus fermentum ATCC 14931]
 gi|227087473|gb|EEI22785.1| threonine--tRNA ligase [Lactobacillus fermentum ATCC 14931]
          Length = 634

 Score =  355 bits (911), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 199/593 (33%), Positives = 330/593 (55%), Gaps = 24/593 (4%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFS 115
           G++E +  E   SL  +R   A ++  A+Q  +  +++      ED F+ D DK+ Q  S
Sbjct: 44  GTVEKVDRESKESLDALRQVAALLLKAALQDQFKGIRLGEAVAEEDQFFVDSDKDNQQVS 103

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           +DEL  +E+ ++++   +       +S + A +  E   + +  E+L+       V+LY+
Sbjct: 104 ADELEGLERAVKKLAKENLKIELVKVSVDDAVKAVEG--DQFSSELLKENAEDGQVSLYK 161

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
            G+   L + P +     VK   KL+ VAGAYW+G S+ PML RIYGT +  +++L   L
Sbjct: 162 MGDTTILAQAPIMLYANLVKNV-KLLSVAGAYWKGMSSNPMLQRIYGTVFFKKEDLEADL 220

Query: 236 YFLEESEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEE 293
              +E+ +RDHR +  ++DLF +  + G+G+ +W  KG  I +T+  Y + +++ D YE 
Sbjct: 221 KARQEARERDHRVIGNQLDLFFVDPKVGAGLPYWMPKGSTIRRTIERYVIDKEVGDGYEH 280

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           + TP +++   ++ SGHWD YR +MF        + D     L+PMNCP H+ ++ H ++
Sbjct: 281 VYTPVLMNLDAYKTSGHWDHYREDMFPPM----DMGDGELLELRPMNCPSHIQIYKHHIR 336

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYRELP+R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  KI  LI+ 
Sbjct: 337 SYRELPLRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQIQDEFAKILKLIMD 396

Query: 414 IYKDFGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL 469
           +YKDF       +LS R     EK   +D +W+ +++++K  +D++       ++     
Sbjct: 397 VYKDFNINDYTFRLSYRDPKNTEKYFANDEMWERSQSMLKAAMDSMG------LDYYEAE 450

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG 529
           GE AFYGPK +   K A+G D    TIQ+DF LP +F+  YV    ++  PVMIHR V G
Sbjct: 451 GEAAFYGPKLDIQTKTALGNDETMSTIQLDFMLPEKFDLHYVGEDGKQHRPVMIHRGVVG 510

Query: 530 SIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRN 588
           ++ERF+  + E +KG  P WL+P Q  +  ++     +YA ++A   ++  L    D R+
Sbjct: 511 TMERFVAYLTEIYKGAFPTWLAPNQVNIIPVSDEKHGDYADDLAREFRAAQLRTVVDHRS 570

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG---STTTQKVSLLDAI 638
           E + YKIRE   +K+P  ++ G+ E +  ++ +R++G     +  K   LD I
Sbjct: 571 EKMGYKIRESQTQKVPYTLVVGEDEVANGTVSVRKYGEKDQVSMSKQDFLDLI 623


>gi|320165002|gb|EFW41901.1| Tarsl2 protein [Capsaspora owczarzaki ATCC 30864]
          Length = 777

 Score =  355 bits (910), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 221/669 (33%), Positives = 330/669 (49%), Gaps = 93/669 (13%)

Query: 39  VAVAINGKVCDLSDPV-------------REGSIEIITPEDPRSLAVIRHSCAHIMAEAV 85
           V   +NGK  DL+ P+                 +E+++ +   +  V  HS AH++  A+
Sbjct: 93  VTCTVNGKPWDLTRPLALFINEHAQDAPSSTLEVELLSFDSNAAKHVAWHSAAHVLGAAM 152

Query: 86  QSIW-PEVQVAIGPII-EDGFYYD---FDKEQPFSSDELAQIEKKMQEIIARDSPFLKQY 140
           + ++  +V +  GP I E GF+Y+    +     S+ +LA +  K    I+   P+ +  
Sbjct: 153 EEVYGDDVVLCDGPAISEGGFFYEGMLANGRGSISTTDLAPLVAKATAFISAKHPYQRVS 212

Query: 141 LSHEKARELFES---KKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
           +S   A  +F     K+   +     + P+   +++YR G++ DLCRGPH+ +TG V   
Sbjct: 213 VSVADALAMFPENPFKQHFIRKAAAAAAPSSPLISIYRCGDFVDLCRGPHIINTGVVGAI 272

Query: 198 FKLMKVAGAYWRGDSNRPM--------LSRIYGTAWNTQQELTQYLYFLEESEKRDHRKL 249
                V+ A W                L R+YG ++     L +++   EE++ RDHR +
Sbjct: 273 -TFHAVSAAEWASPLASAPAALPSPIPLQRVYGISFPKAAMLKEWVTAREEAKLRDHRLI 331

Query: 250 --AREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQ 306
             A+++ +FH    GS  +  H  G KI   L  Y+R   I   Y+E++TP V  + LW+
Sbjct: 332 GAAQQLFMFHPYSPGSAFMLPH--GMKIISRLQEYIRLAYIHYGYQEVSTPIVYSKELWE 389

Query: 307 QSGHWDSYRANMFAVKCA----------------------DDTIKDLRTFALKPMNCPGH 344
            SGH   Y  +MFAV                         D       T ALKPMNCPGH
Sbjct: 390 TSGHLQHYAQDMFAVTGGLTPAAPAAGAAAGAAGHSHHHADSDASSDATQALKPMNCPGH 449

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +F     SYRELP+RLA+F  ++RNE  G+L GL RVR F QDDAH+FCT EQ+  E 
Sbjct: 450 CLIFQRKHYSYRELPIRLADFSPLHRNEAKGALSGLTRVRRFHQDDAHIFCTPEQIQAEI 509

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
           L +   +  +Y   GF +  +KLSTRPE  VGS   WD AE+ +K  L     S     N
Sbjct: 510 LNVLGFVREVYGRLGFSEFTLKLSTRPESFVGSIEQWDYAESCLKDALQQTCGS-----N 564

Query: 465 TGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIH 524
             +  G+GAFYGPK +  ++DAIGR  Q  T+Q+DF LP RF   Y +++ +   PVMIH
Sbjct: 565 WTLNPGDGAFYGPKIDITIRDAIGRQHQTATVQLDFQLPQRFGLRYFDANQQAHTPVMIH 624

Query: 525 RAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLK-------- 576
           RAV GS+ER   I+IEN  G  PLWLSP Q  V ++  S  EYA E+   L+        
Sbjct: 625 RAVLGSLERMFAILIENTAGRWPLWLSPRQVAVCSVDPSVNEYAAEVCKQLEKVSLRLPG 684

Query: 577 -----------------------SHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
                                  +  L +E D  +  ++ KIR+  + +   I++ G +E
Sbjct: 685 SVFEVKNNVTTDSSAATPNGSSSAFALQVEADLSDNRLSKKIRDAQVSQFNYIVVTGARE 744

Query: 614 ASERSIGIR 622
           A++R++ +R
Sbjct: 745 AADRTLNVR 753


>gi|291320287|ref|YP_003515549.1| threonyl tRNA synthetase [Mycoplasma agalactiae]
 gi|290752620|emb|CBH40593.1| Threonyl tRNA synthetase [Mycoplasma agalactiae]
          Length = 582

 Score =  355 bits (910), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 190/586 (32%), Positives = 326/586 (55%), Gaps = 33/586 (5%)

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIAR 132
           + H+ +H++  AVQ ++P V++  GP  ++GFYYDFD  +  S +EL +IEK M+++ +R
Sbjct: 9   LNHTTSHLLGAAVQILYPNVKLGFGPATDEGFYYDFDFAEALSENELGKIEKLMKKLASR 68

Query: 133 DSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-ENVTLY-------RQGEWFDLCR 184
           +   +K       + + ++   + YK E+ + + ++ + +T Y       ++  + DLC 
Sbjct: 69  NLVTIKI------SEDEYDFANKPYKKELYDELKSQGKEITFYALQDPLNKEIVFKDLCA 122

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           G H+ ST  +K F KL+ +AGAYWRGD+    L+RIYGT+W ++ EL +YL  L + ++R
Sbjct: 123 GNHIESTKNIKNF-KLLSIAGAYWRGDNKNKQLTRIYGTSWESKDELDKYLALLADRKER 181

Query: 245 DHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQVLDQ 302
           DHRK+ ++M +F  +   G G   W   G  I   + +  ++   K  + E+ TP    +
Sbjct: 182 DHRKIGKDMKIFTFSPLAGQGFPIWLENGMYIHNEIKNLVLKLDKKYGFTEVLTPHFGAE 241

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            L++ SGH   Y+ +MF     ++      T   +PM CP H+ V+N    SYR+LP+R 
Sbjct: 242 LLYKTSGHLAHYKDDMFKPLLVEN-----ETLIPRPMTCPHHIIVYNTEKHSYRDLPIRY 296

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           +E   +YR E SG+L GL RVRG    + H+F   +Q+ +E  +++  I  I   F  E 
Sbjct: 297 SEQSQLYRYEKSGALTGLERVRGMLLTEGHLFVRYDQIASEVKRMYKQIKEILSIFNIEI 356

Query: 423 IMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
             + LS R     +K   +D++W+ AE++++  L+ +K      +    + GE AFYGPK
Sbjct: 357 SYISLSLRDSNNKDKYFNNDSIWNKAESMLEKALNDMK------VKYKKVEGEAAFYGPK 410

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +  +  A+G +    TIQ+DF  P +F+  Y++ ++++  P+MIHR + G+ ERF+ I+
Sbjct: 411 IDIQIDTALGHEITVSTIQLDFLQPEKFDLSYIDKNNKEVRPIMIHRGLIGTYERFVAIL 470

Query: 539 IENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +E  KGNLP W++P Q  +  +  S  + YA+++A  L +    ++ D  +E +N KIR 
Sbjct: 471 LEQTKGNLPFWIAPKQVTIIPVNLSENLSYAKKVAKKLLNSDFRVKIDDSDERLNKKIRN 530

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             + K    +I G  E +  ++  R +G   T  VS+ D I +L K
Sbjct: 531 AQVSKSKFQLILGSNEMNSNTVSYREYGKEETTTVSINDFIKLLKK 576


>gi|332265242|ref|XP_003281637.1| PREDICTED: probable threonyl-tRNA synthetase 2, cytoplasmic isoform
           2 [Nomascus leucogenys]
          Length = 713

 Score =  354 bits (908), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 184/455 (40%), Positives = 267/455 (58%), Gaps = 17/455 (3%)

Query: 171 VTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQE 230
            T+YR G   DLC+GPHVR TG++K   K+ K +  YW G+     L RIYG ++   + 
Sbjct: 239 TTVYRCGPLIDLCKGPHVRHTGKIKTI-KIFKNSSTYWEGNPEMETLQRIYGISFPDNKM 297

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KD 289
           +  +    EE++ RDHRK+ +E +LF   +   G  F+  +G  I+ TL  ++R +  K 
Sbjct: 298 MRNWEKSQEEAKNRDHRKIGKEQELFFFHDLSPGSCFFLPRGAFIYNTLTDFIREEYHKR 357

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
           D+ E+ +P + +  LW+ SGHW  Y  NMF  +   DT      FALKPMNCPGH  +F 
Sbjct: 358 DFTEVLSPNMYNSKLWEASGHWQHYSENMFTFEIEKDT------FALKPMNCPGHCLMFA 411

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
           H  +S+RE+P+R A+FG ++RNE SG+L GL RVR F QDDAH+FCT EQ+  E      
Sbjct: 412 HRPRSWREMPIRFADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCTVEQIEEEIKGCLQ 471

Query: 410 LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL 469
            + S+Y  FGF    + LSTRPE  +G   +W++AE  ++  L  +      ++N     
Sbjct: 472 FLQSVYSTFGF-SFQLNLSTRPENFLGEIEMWNEAEKQLQSSL--MDFGEPWKMNP---- 524

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVF 528
           G+GAFYGPK +  +KDAIGR  QC TIQ+DF LP RFN  YV+    +K  PV+IHRA+ 
Sbjct: 525 GDGAFYGPKIDIKIKDAIGRYHQCATIQLDFQLPVRFNLTYVSKDGDDKKRPVIIHRAIL 584

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF-R 587
           GS+ER I I+ EN+ G  P WLSP Q +V  +  +  +YA ++++         + D   
Sbjct: 585 GSVERMIAILSENYGGKWPFWLSPHQVMVIPVGPACEKYALQVSSEFFEEGFMADVDLDH 644

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           N T+N KIR   + +   I++ G+KE    ++ +R
Sbjct: 645 NCTLNKKIRNAQLAQYNFILVVGEKEKVNNAVNVR 679


>gi|294155633|ref|YP_003560017.1| threonine--tRNA ligase [Mycoplasma crocodyli MP145]
 gi|291600202|gb|ADE19698.1| threonine--tRNA ligase [Mycoplasma crocodyli MP145]
          Length = 580

 Score =  353 bits (907), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 196/591 (33%), Positives = 329/591 (55%), Gaps = 37/591 (6%)

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIAR 132
           + H+ +H++  AV+ ++P V++  GP I++GFYYDF+  +  S  EL++IEK+M++  +R
Sbjct: 7   LNHTTSHLLGAAVEKLYPNVKLGFGPAIDEGFYYDFEFTEALSDTELSKIEKQMKKFASR 66

Query: 133 DSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLY-------RQGEWFDLCR 184
           +    K   SH      ++ K + YK E+  E I AK++VT Y        +  + DLC 
Sbjct: 67  NLVMKKVDKSH------YDFKNKPYKKELYDELIKAKKDVTFYALVDPLNNEEIFVDLCA 120

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           G H+  T ++K F KL+ ++GAYWRG+S+   L+RIYGT+W +++EL QYL  LE+ ++R
Sbjct: 121 GNHIEDTKKIKNF-KLLNLSGAYWRGNSDNIQLTRIYGTSWYSKEELDQYLAILEDRKER 179

Query: 245 DHRKLAREMDLFHIAE-DGSGVIFWHRKGWKI---FQTLISYMRRKIKDDYEEINTPQVL 300
           DHRK+ +EM LF  ++  G G   W   G  I    + LI  M RK    + E+ TP   
Sbjct: 180 DHRKIGKEMKLFTFSKLAGQGFPIWLEDGMAIHNEVKKLILKMDRKY--GFREVLTPHFG 237

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ L++ SGH   Y+ +MF     +           +PM CP H+  +    +SYR+LP+
Sbjct: 238 EETLYKISGHLAHYKDDMFKPLEVEG-----EKLYPRPMTCPHHIICYKTEKRSYRDLPI 292

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R +E   +YR E SG+L GL RVRG    + H+F   +Q+ NE   +++LI         
Sbjct: 293 RYSEQSQLYRYEKSGALTGLERVRGMLLTEGHIFLRPDQIENEFKTMYSLIKETLDLLKI 352

Query: 421 EKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           +   + LS R     EK    D +W+++E  ++ VL+ +    ++++      GE AFYG
Sbjct: 353 KINYISLSLRDKNDKEKYFDDDKMWNNSEEQLRKVLNDLNVQYEEKV------GEAAFYG 406

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK +  +  ++G +    T+Q+DF LP+RF   Y +    +  PV++HR + G+ ERF+ 
Sbjct: 407 PKIDIQIFTSLGHEITISTLQLDFLLPTRFEMKYTDKDGNEKTPVLLHRGLIGTYERFVA 466

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITS-SAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++E  KG LP WL+P Q  +  +   + + Y++EI N L  H   +  D R E ++ K+
Sbjct: 467 TLLEQTKGVLPFWLAPKQVTIIPVHEINNLTYSKEIYNTLFDHDFRVSLDDREERLSKKM 526

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           RE  I K    +I GD+E + ++I  R++G  +T   ++ + I ++ ++ +
Sbjct: 527 REAQISKSKYQLILGDEEQNNKTISYRKYGENSTTTTTIDEFIKMINEDRM 577


>gi|148377610|ref|YP_001256486.1| threonyl-tRNA synthetase [Mycoplasma agalactiae PG2]
 gi|148291656|emb|CAL59042.1| Threonyl tRNA synthetase [Mycoplasma agalactiae PG2]
          Length = 582

 Score =  353 bits (905), Expect = 7e-95,   Method: Compositional matrix adjust.
 Identities = 189/586 (32%), Positives = 324/586 (55%), Gaps = 33/586 (5%)

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIAR 132
           + H+ +H++  AV++++P V++  GP  ++GFYYDFD  +P S +EL +IEK M+++ +R
Sbjct: 9   LNHTTSHLLGAAVETLYPNVKLGFGPATDEGFYYDFDFAEPLSENELGKIEKLMKKLASR 68

Query: 133 DSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-ENVTLY-------RQGEWFDLCR 184
           +   +K           ++   + YK E+ + + ++ + +T Y       ++  + DLC 
Sbjct: 69  NLVTVKI------DENQYDFANKPYKKELYDELKSQGKEITFYALQDPLNKELVFKDLCA 122

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           G H+ ST  +K F KL+ +AGAYWRGD+    L+RIYGT+W ++ EL +YL  L + ++R
Sbjct: 123 GNHIESTKNIKNF-KLLSIAGAYWRGDNKNRQLTRIYGTSWESKDELDKYLALLADRKER 181

Query: 245 DHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQVLDQ 302
           DHRK+ ++M +F  +   G G   W   G  I   + +  ++   K  + E+ TP    +
Sbjct: 182 DHRKIGKDMKIFTFSPLAGQGFPIWLENGMYIHNEIRNLVLKLDKKYGFTEVLTPHFGAE 241

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            L++ SGH   Y+ +MF     ++      T   +PM CP H+ V+N    SYR+LP+R 
Sbjct: 242 LLYKTSGHLAHYKDDMFKPLLVEN-----ETLIPRPMTCPHHIIVYNTEKHSYRDLPIRY 296

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           +E   +YR E SG+L GL RVRG    + H+F   +Q+ +E  +++  I  +   F  E 
Sbjct: 297 SEQSQLYRYEKSGALTGLERVRGMLLTEGHLFVKYDQIASEVKRMYKQIKEMLSIFNIEI 356

Query: 423 IMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
             + LS R     +K   +D++W+ AE +++  L  +K      +N   + GE AFYGPK
Sbjct: 357 SYISLSLRDSNNKDKYFNNDSIWNKAEAMLEKALKDMK------VNYTKVEGEAAFYGPK 410

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +  +  A+G +    TIQ+DF  P +F+  Y++ ++++  P+MIHR + G+ ERF+ I+
Sbjct: 411 IDIQIDTALGHEITVSTIQLDFLQPEKFDLSYIDKNNKEVRPIMIHRGLIGTYERFVAIL 470

Query: 539 IENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +E  KGNLP W++P Q  +  +     + Y +++A  L ++   ++ D  +E +N KIR 
Sbjct: 471 LEQTKGNLPFWIAPKQVTIIPVNLEENLAYVKKVAKKLLNNDFRVKIDDSDERLNKKIRN 530

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             + K    +I G  E +  +I  R +G   T  VS+ D I +L K
Sbjct: 531 AQVSKSKFQLILGSNEMNSNTISYREYGKEETTTVSINDFIKLLKK 576


>gi|323446287|gb|EGB02506.1| hypothetical protein AURANDRAFT_59726 [Aureococcus anophagefferens]
          Length = 452

 Score =  353 bits (905), Expect = 7e-95,   Method: Compositional matrix adjust.
 Identities = 175/409 (42%), Positives = 249/409 (60%), Gaps = 13/409 (3%)

Query: 216 MLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWK 274
           ML RIYGTAW    +L ++   LEE++KRDHR L +++DLF I E  G G+ FWH +G +
Sbjct: 1   MLQRIYGTAWQENWQLAEHKRRLEEAKKRDHRVLGKKLDLFSIQEAAGGGLCFWHPRGAR 60

Query: 275 IFQTL-ISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           I   +  ++     +  YE + TP + +  LW+ SGH+D Y   MF     D    +   
Sbjct: 61  IRMLMEDTWKAAHERGGYELLVTPHIANVDLWKTSGHFDFYAEGMF-----DQMDVEKEQ 115

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
           + LKPMNCP H  V+   L+SYR+LP R AE G+VYR E SG+L GLMRVRGFTQDDAH+
Sbjct: 116 YQLKPMNCPFHCLVYKDQLRSYRDLPFRWAELGTVYRYERSGTLQGLMRVRGFTQDDAHI 175

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
           FCT EQ+ +E + +  L   I   FGF+   + LSTRP+K VGSD +W  A   +KG LD
Sbjct: 176 FCTPEQLEDEIVAVLELTEEILSKFGFDDYELMLSTRPDKAVGSDEIWTKATAALKGALD 235

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS 513
                 +   + GV  G GAFYGPK +  +KDA+GR WQC T+Q DFNLP RF   Y  +
Sbjct: 236 ------RKGWDHGVDEGGGAFYGPKIDLKIKDALGRQWQCSTVQCDFNLPERFELEYRAA 289

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIAN 573
             +   P+M+HRA+FGS+ERF  I++E+  G+LPLWL+P Q  +  +T  A ++++ +A 
Sbjct: 290 SGQAERPIMVHRAIFGSLERFFAILLESCGGDLPLWLAPTQMRLLPVTDDARDFSKAVAA 349

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
                 +  E D   + +N +IR    +++PI+ + G+KE +   + +R
Sbjct: 350 KAAQRGIRCEIDSGKDRLNKQIRNAETQRVPIMCVVGEKEMASGDLAVR 398


>gi|207723063|ref|YP_002253475.1| threonyl-trna synthetase protein [Ralstonia solanacearum MolK2]
 gi|206588254|emb|CAQ18812.1| threonyl-trna synthetase protein [Ralstonia solanacearum MolK2]
          Length = 344

 Score =  352 bits (904), Expect = 9e-95,   Method: Compositional matrix adjust.
 Identities = 173/346 (50%), Positives = 238/346 (68%), Gaps = 9/346 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           I +T PDGS + FP   T ++VA+SI   LAK A+A  I+G + D S  + +   + I+T
Sbjct: 2   IAITLPDGSRREFPGPVTVAEVAQSIGAGLAKAALAGRIDGHLVDTSFKIEQSVDLAIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   L VIRHS AH++A AV+ + P+ QV IGP+IE+GFYYDF  ++PF+ ++L  IE
Sbjct: 62  DKDADGLDVIRHSTAHLLAYAVKELHPDAQVTIGPVIENGFYYDFAYKRPFTPEDLVAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           KKM E+  +D    ++     +A +LFE   E YK EI+ SIP  + + LYR+G + DLC
Sbjct: 122 KKMAELAKKDEKVTREVWRRNEAVKLFEGMGEKYKAEIIASIPEDQEIGLYREGSFVDLC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV STG++ K FKLMKVAGAYWRGDSN  ML RIYGTAW  +++   YL+ LEE+EK
Sbjct: 182 RGPHVPSTGKL-KVFKLMKVAGAYWRGDSNNEMLQRIYGTAWAKKEDQEAYLHMLEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ E+  G++FWH KGW+I+Q +  YMR ++    Y E+ TPQV+D+
Sbjct: 241 RDHRKLGKQLDLFHLQEEAPGMVFWHPKGWQIWQAVEQYMRGRLAGAGYSEVRTPQVMDR 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
            LW+ SGHW +Y+ NMF       T  + R +A+KPMNCPGHV +F
Sbjct: 301 TLWEHSGHWQNYKENMFV------TESEKREYAIKPMNCPGHVQIF 340


>gi|293363452|ref|ZP_06610209.1| threonine--tRNA ligase [Mycoplasma alligatoris A21JP2]
 gi|292552972|gb|EFF41725.1| threonine--tRNA ligase [Mycoplasma alligatoris A21JP2]
          Length = 580

 Score =  352 bits (904), Expect = 9e-95,   Method: Compositional matrix adjust.
 Identities = 200/589 (33%), Positives = 324/589 (55%), Gaps = 37/589 (6%)

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIAR 132
           + H+ +H++  AV+ ++P V++  GP I +GFYYDF+  +  S  EL++IEK M+++ +R
Sbjct: 7   LNHTTSHLLGAAVEKLYPGVKLGFGPAISEGFYYDFEFLEALSDTELSKIEKFMKKLASR 66

Query: 133 DSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLY-------RQGEWFDLCR 184
           +    +   SH      FE+K   YK E+  E +   + +T Y       ++  + DLC 
Sbjct: 67  NLVMQQVDQSHYS----FENK--PYKKELYDELVKQGKTITFYALVDPLSKEEIFVDLCA 120

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           G H   T ++K F KL+ ++GAYWRGDSN   L+RIYGT+W+T++EL  YL  L++ ++R
Sbjct: 121 GNHTEDTKKIKNF-KLLNLSGAYWRGDSNNIQLTRIYGTSWDTKEELATYLEILKDRKER 179

Query: 245 DHRKLAREMDLFHIAE-DGSGVIFWHRKGWKI---FQTLISYMRRKIKDDYEEINTPQVL 300
           DHRK+ +EM LF  ++  G G+  W   G  I    + L+  M +K    + E+ TP   
Sbjct: 180 DHRKIGKEMKLFAFSKLSGQGLPIWLEDGMAIHNEIKNLVLKMDKKY--GFREVLTPHFG 237

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ L++ SGH   Y+ +MF     +           +PM CP H+  +N   +SYR+LP+
Sbjct: 238 EETLYKISGHLAHYKDDMFKPIVVEG-----ERLIPRPMTCPHHIICYNMEKRSYRDLPI 292

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R +E   +YR E SG+L GL RVRG    + H+F   +Q+ +E   ++ LI         
Sbjct: 293 RYSEQSQLYRYEKSGALTGLERVRGMLLTEGHIFLRPDQIESEFKTMYALIKETLDLLKI 352

Query: 421 EKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           +   + LS R     EK    D +W+ +E  ++ VLD +    +++I      GE AFYG
Sbjct: 353 KINYISLSLRDKEDKEKYFDDDKMWNSSEAQLRKVLDDLNIEYEEKI------GEAAFYG 406

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK +  +  ++G +    T+Q+DF LPSRF   Y +   E+  PV++HR + G+ ERF+ 
Sbjct: 407 PKIDIQIFTSLGHEITISTLQLDFLLPSRFEMKYTDKDGEEKTPVLLHRGLIGTYERFVA 466

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITS-SAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++E  KGNLP WL+P Q  V  +   +  EYA+E+   L ++ +  + D R E ++ K+
Sbjct: 467 TLLEQTKGNLPFWLAPKQVTVIPVHEINNYEYAKEVNEFLFANDIRTKLDDREERLSKKM 526

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           RE  I K    +I GDKE   ++I  R++G  +T   SL   + +L  +
Sbjct: 527 REAQISKSKYQLILGDKEQESKTISYRKYGEDSTTTTSLEKFLEMLNND 575


>gi|62422036|gb|AAX82600.1| putative threonyl-tRNA synthetase [Lactobacillus reuteri]
          Length = 601

 Score =  352 bits (904), Expect = 9e-95,   Method: Compositional matrix adjust.
 Identities = 196/586 (33%), Positives = 322/586 (54%), Gaps = 21/586 (3%)

Query: 56  EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPF 114
           +GS++ I  +   SL  +R   A ++  A++  +  +++      EDGF+ D DK+ Q  
Sbjct: 10  DGSVKKIDRDSQESLEALRKLSALMLKAALKQEFKGIRLGEAVADEDGFHVDSDKDNQQV 69

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
           S+DEL  +E  ++ +   D       +  E+A  L E K + +  E++        V +Y
Sbjct: 70  SADELPALEDVIKGMAKNDVKVEFVEVPVEEA--LAEVKDDRFSTELINENAKDGKVAMY 127

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
           + G+         +   G V K  +L+ VAGAYW+G S+ PML RIYGT +  +  L + 
Sbjct: 128 QLGD-VKAVADDDILLYGNVVKNLRLLSVAGAYWKGMSSNPMLQRIYGTVFYKKDALEED 186

Query: 235 LYFLEESEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYE 292
           L   +E+++RDHR +  ++DLF +  + G+G+ +W  KG  I +T+  Y+  R++ D ++
Sbjct: 187 LKKRQEAKERDHRVIGNQLDLFFVDPKVGAGLPYWLPKGATIRRTIERYIIDREVADGHQ 246

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
            + TP +++   ++ SGHW  YR +MF        + D      +PMNCP H+ V+ H +
Sbjct: 247 HVYTPVLMNLDAYKTSGHWAHYRDDMFPPM----DMGDGEMLESRPMNCPSHIQVYKHHI 302

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
           +SYR+LP+R+AE G ++R E SG+L GL RVR  T +D H F T +Q+ +E  KI  LI+
Sbjct: 303 RSYRDLPLRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVTLDQIRSEFAKILKLIM 362

Query: 413 SIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
           S+Y+DF       +LS R  K V     +D +W+ +++++K  +D +       ++    
Sbjct: 363 SVYEDFDITDYSFRLSLRDPKNVKKYYANDEMWEKSQSMLKSAMDDLN------LDYYEA 416

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
            GE AFYGPK +   K A+G D    TIQ+DF LP RF   YV    ++  PVMIHR V 
Sbjct: 417 EGEAAFYGPKLDIQTKTALGNDETMSTIQLDFMLPERFGLSYVGQDGKEHQPVMIHRGVV 476

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFR 587
           G++ERF+  + E +KG  P WL+P Q  +  +   A  EYA  +A  +K+ ++ +    R
Sbjct: 477 GTMERFMAYLTEIYKGAFPTWLAPEQVHIIPVNEEAHGEYADNLAKKMKAANIRVNVAHR 536

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
           NE + YKIRE   +K+P  ++ GD E +   + + ++G     ++S
Sbjct: 537 NEKMGYKIREAQTQKVPYTLVVGDDEKNSNGVSVSKYGEKEQNEMS 582


>gi|167589762|ref|ZP_02382150.1| tRNA synthetase, class II (G, H, P and S) [Burkholderia ubonensis
           Bu]
          Length = 406

 Score =  352 bits (904), Expect = 9e-95,   Method: Compositional matrix adjust.
 Identities = 174/405 (42%), Positives = 245/405 (60%), Gaps = 14/405 (3%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHR L  ++DLFH  ++  G +FWH +G  +++ +  Y+R +++   + E+ TPQ+  + 
Sbjct: 5   DHRVLGNKLDLFHQQDESPGAVFWHPRGMALYRVVEEYIRERMRQAGFAEVRTPQIASRA 64

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+QSGHW+ +  NMF++        D + F LKPM+CP HV VF  G +SYR+LPVR +
Sbjct: 65  LWEQSGHWEKFGRNMFSLD------SDGQPFCLKPMSCPCHVQVFKRGSRSYRDLPVRYS 118

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFG+V+R EPSGSLHGLMR R FTQDDAHV C ++Q+  E  +   L+ +IY DFGF++ 
Sbjct: 119 EFGAVHRAEPSGSLHGLMRARAFTQDDAHVLCMEDQVEAEVARFCRLLKTIYADFGFDRF 178

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            V LSTRP  R G DALWD +E+++     +        ++  +  GEGAFYGPK E+ L
Sbjct: 179 DVALSTRPSVRAGDDALWDRSESMLALAARSAG------LHFEIQQGEGAFYGPKLEFHL 232

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D  GR WQCGTIQ+DF LP R  A YV+    K  PVM+H AV GS+ERFIGI++E+ +
Sbjct: 233 LDRQGRKWQCGTIQLDFVLPERLGATYVSESGAKATPVMLHHAVLGSLERFIGILLEHHE 292

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G LP WL+P Q +V  I   A  +A   A   ++    +  DFR E +  KI +      
Sbjct: 293 GWLPTWLAPDQIVVANIGDEARPFADSAALAFETIGCRVLRDFRPERLPRKIFDARELAA 352

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
           PI  + G KEA   ++ + R  +     +S+ DA+  L K    P
Sbjct: 353 PIFAVAGPKEAQSGAVSL-RLRNGERHALSIGDALAYLEKRVCAP 396


>gi|110004597|emb|CAK98934.1| probable threonyl-trna synthetase 1 protein [Spiroplasma citri]
          Length = 638

 Score =  352 bits (903), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 211/650 (32%), Positives = 346/650 (53%), Gaps = 25/650 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           IK+T PDG ++ F    T   +A SI+ SL K A      G+V  L   V  +G++EIIT
Sbjct: 2   IKITLPDGQVREFNTPQTIHAIASSIASSLGKAAFGGVFAGQVRGLDYLVTTDGTLEIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            + P +LA++ ++ A I A+A+ +++P  ++A     +D F  DFD E      +L+ ++
Sbjct: 62  DKSPLALAILHYTTALITAKAITNLYPTAKIAKIAAQDDTFLVDFDVEPHLKETDLSALD 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           +++ ++I  +        +   A++ + +    Y +       A++    Y  G    L 
Sbjct: 122 QEVTKLINNNLVIKPVLGALADAKKWYNNN--PYLLTFCAETGAEQGG--YLLGNELYLP 177

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
               V S   + K  KL  +AGAYW+ D+   ML R+ G++  +++   Q L+  EE  +
Sbjct: 178 NTYPVTSLKHI-KVLKLWSLAGAYWQDDAKNKMLQRLTGSSHFSRELFEQVLFAYEERRE 236

Query: 244 RDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLD 301
           RDHRK+ +++++F   +  G G+  W   G  + + L  Y+R K  + D+ E++TP +  
Sbjct: 237 RDHRKIGKDLEIFTFDKLVGPGLPIWLPNGMALKKVLQEYIREKEWEYDFTEVDTPVIGT 296

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             +++ SGHWD Y+ NMFA    ++ I  LR     PM CP H+AV+N+  +SYRELP+R
Sbjct: 297 SEMYKISGHWDHYQENMFAPMAQNNEISVLR-----PMACPHHIAVYNYKQRSYRELPLR 351

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM---FNECLKIHNLIISIYK-D 417
           +AE   ++R E SGSL GL RVR     D+H+F   +Q+   F  C K+ N +++  K  
Sbjct: 352 IAEHAILHRYETSGSLTGLERVRMMQLTDSHIFLRHDQLKEEFKRCFKLINEVLTDLKIT 411

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
             +  + ++     EK    + +W+ AE +++  LD +K      I    ++GE AFYGP
Sbjct: 412 VDYYSLSLRDPANKEKYYDDNQMWNHAEQMLQEALDDLK------IPYVPMIGEAAFYGP 465

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  +K A+  +    T+Q DF LP +FN  Y++    K  PVM+HR + G+ ERFI I
Sbjct: 466 KLDIQIKTALNHEITVSTLQFDFLLPKKFNLSYIDETGAKAMPVMLHRGLIGTYERFIAI 525

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           ++E  KG LP WL+P Q ++  + +   +EY  E+    K   L    D R+E ++YKIR
Sbjct: 526 LLEQTKGVLPFWLAPKQIVIIPVNNEHHLEYVNELHQQFKKLKLRTTIDDRDERLSYKIR 585

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           E  + KIP  I+ GD+E  ++ I  R +G    Q  +  D   IL  E +
Sbjct: 586 EAQVAKIPYQIVIGDQERDKKMITYRIYGQ-EDQITTTFDKFIILINEQI 634


>gi|114559277|ref|XP_001168750.1| PREDICTED: threonyl-tRNA synthetase-like 1 isoform 2 [Pan
           troglodytes]
          Length = 635

 Score =  351 bits (900), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 193/520 (37%), Positives = 291/520 (55%), Gaps = 23/520 (4%)

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
             EL  +E+  QE+ A   PF +   S ++ R+LF  K   +K+ ++E        T+Y 
Sbjct: 92  GSELPVLERICQELTAAARPFRRLEASRDQLRQLF--KDNPFKLHLIEEKVTGPTATVYG 149

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
            G   DLC+GPH+R TGQ+     L   +  +    +    L R+ G ++ T + L  + 
Sbjct: 150 CGTLVDLCQGPHLRHTGQIGGLKLLSNSSSLWRSSGAPE-TLQRVSGISFPTTELLRAWE 208

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEI 294
            + EE+E RDHR++ +E +LF   E   G  F+  +G +++  L++++R +     + E+
Sbjct: 209 AWREEAELRDHRRIGKEQELFFFHELSPGSCFFLPRGTRVYNALVAFIRAEYAHRGFSEV 268

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKC----------ADDTIKDLR-TFALKPMNCPG 343
            TP +    LW+QSGHW+ Y+ +MFAV+           +DD+ + +  T ALKPMNCP 
Sbjct: 269 KTPTLFSTKLWEQSGHWEHYQEDMFAVQPPGSDRPPSSQSDDSTRHITDTLALKPMNCPA 328

Query: 344 HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE 403
           H  +F H  +S+RELP+RLA+FG+++R E SG L GL R+R F QDDAH+FCT +Q+  E
Sbjct: 329 HCLMFAHRPRSWRELPLRLADFGALHRAEASGGLGGLTRLRCFQQDDAHIFCTTDQLEAE 388

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
                + + S+Y   GF    + LSTRP   +G   LWD AE ++K  L          +
Sbjct: 389 IQSCLDFLRSVYAVLGF-SFRLALSTRPSGFLGDPCLWDQAEQVLKQALKEFGEPWD--L 445

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
           N+G    +GAFYGPK +  L DA+GR  QCGTIQ+DF LP RF+  Y         PV+I
Sbjct: 446 NSG----DGAFYGPKIDVHLHDALGRPHQCGTIQLDFQLPLRFDLQYKGQAGALERPVLI 501

Query: 524 HRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIE 583
           HRAV GS+ER +G++ E+  G  PLWLSP Q +V  + S   EYA+E    L++  L  +
Sbjct: 502 HRAVLGSVERLLGVLAESCGGKWPLWLSPFQVVVIPVGSEQEEYAKEAQQSLRAAGLVSD 561

Query: 584 TDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
            D  +  T++ +IR   +       + G KE S+R++ IR
Sbjct: 562 LDADSGLTLSRRIRRAQLAHYNFQFVVGQKEQSKRTVNIR 601


>gi|284173635|ref|ZP_06387604.1| threonyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
 gi|261600981|gb|ACX90584.1| threonyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
          Length = 545

 Score =  349 bits (895), Expect = 9e-94,   Method: Compositional matrix adjust.
 Identities = 179/504 (35%), Positives = 293/504 (58%), Gaps = 22/504 (4%)

Query: 154 KEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSN 213
           K+A    +L ++P + N  +Y+ G    +        T    K+F+++ ++  +    + 
Sbjct: 52  KKAISKNVLANVPIENNQVVYK-GNKVSIVEDKVSIPTNLNPKYFEILNISTHH---PNP 107

Query: 214 RPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKG 272
                RI G A+ T+++L  YL +LE++E+ DHR +  ++DLF   E+ GSG++ +H KG
Sbjct: 108 NEQYVRIRGVAFETEEQLKDYLTWLEKAEETDHRLIGEKLDLFSFHEEAGSGLVLFHPKG 167

Query: 273 WKIFQTLISYMRRKIKDD--YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
             +   LI++MR +I D   Y+E+ T  VL   +W+ SGH+  YR  +       D    
Sbjct: 168 QTLRNELITFMR-EINDSMGYQEVYTSHVLKTDIWKISGHYTLYRDKLIVFNMEGDE--- 223

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
              + +KPMNCP H+ ++    ++YR+LP+R +EFG VYR E  G L+GL+RVRGF QDD
Sbjct: 224 ---YGVKPMNCPAHILIYKSKPRTYRDLPIRFSEFGHVYRWEKKGELYGLLRVRGFVQDD 280

Query: 391 AHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK--LSTRPEKRVGSDALWDDAENIM 448
            H+F  ++Q+  E   + +  + ++  FGF+   +K  LSTRP++ +GSD LW+ A N +
Sbjct: 281 GHIFLKEDQLKEEIKMLISKTVEVWHKFGFKDDDIKPYLSTRPDESIGSDELWEKATNAL 340

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
              L       +  +  G+   EGAFYGPK ++ ++D++GR WQ  TIQVDFNLP RF  
Sbjct: 341 ISAL------QESGLKFGIKEKEGAFYGPKIDFEIRDSLGRWWQLSTIQVDFNLPERFKL 394

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYA 568
            Y++    K  PVM+HRA++GSI+RF+ I++E+FKG LP WLSP+Q  V  IT    EYA
Sbjct: 395 EYIDKDGTKKRPVMVHRAIYGSIDRFVAILLEHFKGKLPTWLSPVQVKVLPITDEVNEYA 454

Query: 569 QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
           +++ N ++   +  E D+  ET++ +I+    + +P I+I G KEAS+ ++ +R  G+  
Sbjct: 455 EKVLNDMRKRRIRAEIDYAGETLSRRIKNAYDQGVPYILIVGKKEASQGTVTVRARGNIE 514

Query: 629 TQKVSLLDAIPILTKESLPPDCQK 652
            + V     + ++  E    D ++
Sbjct: 515 VRNVKFEKFLDLMITEITQRDVEQ 538


>gi|238618767|ref|YP_002913592.1| threonyl-tRNA synthetase [Sulfolobus islandicus M.16.4]
 gi|259516721|sp|C4KKV9|SYT_SULIK RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|238379836|gb|ACR40924.1| threonyl-tRNA synthetase [Sulfolobus islandicus M.16.4]
          Length = 545

 Score =  348 bits (893), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 181/504 (35%), Positives = 292/504 (57%), Gaps = 22/504 (4%)

Query: 154 KEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSN 213
           K+A    +L ++P + N  +Y+ G    +       ST    K+F+++ ++  +    + 
Sbjct: 52  KKAINENVLANVPIENNQIVYK-GNKVSIIEDKVSISTNLNPKYFEILNISTHH---PNP 107

Query: 214 RPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKG 272
                RI G A+ T+++L  YL +LE++E+ DHR +  ++DLF   E+ GSG++ +H KG
Sbjct: 108 NEQYVRIRGVAFETEEQLKDYLTWLEKAEETDHRLIGEKLDLFSFHEEAGSGLVLFHPKG 167

Query: 273 WKIFQTLISYMRRKIKDD--YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
             I   LI++MR +I D   Y+E+ T  V    +W+ SGH+  YR  +       D    
Sbjct: 168 QTIRNELIAFMR-EINDSMGYQEVYTSHVFKTDIWKISGHYTLYRDKLIVFNMEGDE--- 223

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
              + +KPMNCP H+ ++    ++YR+LP+R +EFG VYR E  G L+GL+RVRGF QDD
Sbjct: 224 ---YGVKPMNCPAHILIYKSKPRTYRDLPIRFSEFGHVYRWEKKGELYGLLRVRGFVQDD 280

Query: 391 AHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK--LSTRPEKRVGSDALWDDAENIM 448
            H+F  ++Q+  E   + +  + ++  FGF+   +K  LSTRP++ +GSD LW+ A N +
Sbjct: 281 GHIFLREDQLMEEIKMLISKTVEVWHKFGFKDDDIKPYLSTRPDESIGSDELWEKATNAL 340

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
              L       +  +  G+   EGAFYGPK ++ ++D++GR WQ  TIQVDFNLP RF  
Sbjct: 341 ISAL------QESGLKFGIKEKEGAFYGPKIDFEIRDSLGRWWQLSTIQVDFNLPERFKL 394

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYA 568
            Y++    K  PVM+HRA++GSI+RF+ I++E+FKG LP WLS +Q  V  IT    EYA
Sbjct: 395 EYIDKDGIKKRPVMVHRAIYGSIDRFVAILLEHFKGKLPTWLSSVQVRVLPITDEVNEYA 454

Query: 569 QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
           +++ N ++   +  E D+  ET++ +I+    + +P I+I G KEASE ++ +R  G+  
Sbjct: 455 EKVLNDMRKRRIRAEIDYAGETLSKRIKNAYDQGVPYILIVGKKEASEGTVTVRARGNIE 514

Query: 629 TQKVSLLDAIPILTKESLPPDCQK 652
            + V     + +L  E    D ++
Sbjct: 515 VRNVKFEKFLELLITEIAQRDVEQ 538


>gi|108757584|ref|YP_630572.1| threonyl-tRNA synthetase [Myxococcus xanthus DK 1622]
 gi|108461464|gb|ABF86649.1| threonyl-tRNA synthetase [Myxococcus xanthus DK 1622]
          Length = 400

 Score =  348 bits (892), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 153/383 (39%), Positives = 241/383 (62%), Gaps = 13/383 (3%)

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVL 300
           ++ DHR L + +DLFH+ E+  G++FWH +G  +++ L  ++R++++ + Y+E+ TPQ+ 
Sbjct: 3   DEHDHRALGQRLDLFHLQEEAPGMVFWHPRGLVLYRLLEEHVRQRMRREGYQEVRTPQLY 62

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            Q LW++SGHWD++R NMF V+         R   +KP++CPGH+ +      SYR+LP+
Sbjct: 63  AQPLWERSGHWDNFRENMFLVE------DGARHLGVKPVSCPGHIELVQRMAPSYRDLPL 116

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RL EFG V+R EP G+LHGL R+R FTQDD H+FC + Q+  E ++    +   Y  FGF
Sbjct: 117 RLGEFGLVHRAEPGGALHGLFRLRQFTQDDGHIFCAEPQVVPEVVRFARSLKDFYAGFGF 176

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           + + V  S RP  R G D LWD AE+ +      +  + +  +   +  GEGAFYGPK E
Sbjct: 177 DDVQVAFSGRPASRAGRDELWDKAESWL------LLAAKEAGLQCHMQPGEGAFYGPKLE 230

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           ++LKD +GR WQCGTIQ+D  LP RF+  YV++   +  PVM+HRA+ GS+ERFIG+M+E
Sbjct: 231 FVLKDRLGRAWQCGTIQLDLVLPERFDLHYVDASGARVRPVMLHRALLGSLERFIGVMLE 290

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +  G LP WL+P Q +V ++   A +YA+  A  L+        D R E+++ K+ +   
Sbjct: 291 HHGGALPPWLAPQQVVVASVGEGAADYAERFAAKLQEAGCRASVDRRGESLSRKVLDAHA 350

Query: 601 KKIPIIIICGDKEASERSIGIRR 623
             +P +++ G +E +  ++ +R+
Sbjct: 351 AGVPWLVVAGAREVAAGNVRLRQ 373


>gi|194210848|ref|XP_001916146.1| PREDICTED: similar to threonyl-tRNA synthetase 2, mitochondrial
           [Equus caballus]
          Length = 667

 Score =  347 bits (891), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 211/635 (33%), Positives = 318/635 (50%), Gaps = 78/635 (12%)

Query: 5   IKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEII 62
           IK+  P G  +     + T   +A+ IS +LA  AVA  +NG+  DL  P+ + S +  +
Sbjct: 60  IKIALPGGHKVDAVAWNTTPYQLAQQISSTLADTAVAAEVNGEPYDLERPLEKDSDLRFL 119

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF--DKEQPFSSDELA 120
           T +     AV  HS  H++  A + +   V +  GP  E GFY+DF   KE+     +L 
Sbjct: 120 TFDSAEGKAVFWHSSTHVLGSAAEQLLGAV-LCRGPSTECGFYHDFFLGKERTVRGSDLP 178

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            +E+  +++ A   PF +   S ++ R+LF  K   +K+ ++E        T+Y  G   
Sbjct: 179 LLEQFCRKLAAAAQPFRRLEASQDQLRQLF--KDNPFKLRLIEEKVTGPKATVYGCGMLV 236

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLC+GPH+R TGQ+                                              
Sbjct: 237 DLCQGPHLRHTGQIGAL------------------------------------------- 253

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQV 299
                  KL  E +LF   E   G  F+  +G +++  L++++R +  +  + E+ TP +
Sbjct: 254 -------KLLTEQELFFFHELSPGSCFFLPRGTRVYNALVAFIRAEYSRRGFSEVKTPTL 306

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADD-----------TIKDLRTFALKPMNCPGHVAVF 348
               LW+ SGHW+ Y+ +MFA++               T     T ALKPMNCP H  +F
Sbjct: 307 FSTKLWELSGHWEHYQEDMFALQPPGSDRPTGSQSDHSTSHPTDTLALKPMNCPAHCLMF 366

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
            H  +S+RELP+RLA+FG ++R E SGSL GL R+R F QDDAH+FC  +Q+  E     
Sbjct: 367 AHRPRSWRELPLRLADFG-LHRAEVSGSLGGLTRLRRFQQDDAHIFCAPDQLEAEIRGCL 425

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
           + + SIY   GF    + LSTRP   +G   LWD AE +++  L+         +N G  
Sbjct: 426 DFLRSIYAVLGF-SFRLALSTRPSGFLGEPCLWDQAEQVLQQALEEFGEPWD--LNPG-- 480

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
             +GAFYGPK +  L DA+GR  QCGTIQ+DF LP RF+  Y        HPV+IHRAV 
Sbjct: 481 --DGAFYGPKIDVHLHDALGRSHQCGTIQLDFQLPLRFDLQYKGQAGALEHPVLIHRAVL 538

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRN 588
           GS+ER +G++ E+  G  PLWLSP Q +V  + +    YA+E    L++  L  + D  +
Sbjct: 539 GSVERMLGMLAESCGGKWPLWLSPFQVVVIPVGTEQEGYAREAQRSLQAAGLVCDLDADS 598

Query: 589 E-TINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
             T++ ++R   +       + G KE S+R++ IR
Sbjct: 599 GLTLSRRVRRAQLAHYNFQFVVGQKEQSKRTVNIR 633


>gi|229583844|ref|YP_002842345.1| threonyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
 gi|259516679|sp|C3N1B5|SYT_SULIA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|228018893|gb|ACP54300.1| threonyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
 gi|323476419|gb|ADX81657.1| threonyl-tRNA synthetase [Sulfolobus islandicus HVE10/4]
          Length = 545

 Score =  347 bits (891), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 181/504 (35%), Positives = 292/504 (57%), Gaps = 22/504 (4%)

Query: 154 KEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSN 213
           K+A    +L ++P + N  +Y+ G    +       ST    K+F+++ ++  +    + 
Sbjct: 52  KKAINENVLANVPIENNQIVYK-GNKVSIIEDKVSISTNLNPKYFEILNISTHH---PNP 107

Query: 214 RPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKG 272
                RI G A+ T+++L  YL +LE++E+ DHR +  ++DLF   E+ GSG++ +H KG
Sbjct: 108 NEQYVRIRGVAFETEEQLKDYLTWLEKAEETDHRLIGEKLDLFSFHEEAGSGLVLFHPKG 167

Query: 273 WKIFQTLISYMRRKIKDD--YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
             I   LI++MR +I D   Y+E+ T  V    +W+ SGH+  YR  +       D    
Sbjct: 168 QTIRNELIAFMR-EINDSMGYQEVYTSHVFKTDIWKISGHYTLYRDKLIVFNMEGDE--- 223

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
              + +KPMNCP H+ ++    ++YR+LP+R +EFG VYR E  G L+GL+RVRGF QDD
Sbjct: 224 ---YGVKPMNCPAHILIYKSKPRTYRDLPIRFSEFGHVYRWEKKGELYGLLRVRGFVQDD 280

Query: 391 AHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK--LSTRPEKRVGSDALWDDAENIM 448
            H+F  ++Q+  E   + +  + ++  FGF+   +K  LSTRP++ +GSD LW+ A N +
Sbjct: 281 GHIFLREDQLREEIKMLISKTVEVWHKFGFKDDDIKPYLSTRPDESIGSDELWEKATNAL 340

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
              L       +  +  G+   EGAFYGPK ++ ++D++GR WQ  TIQVDFNLP RF  
Sbjct: 341 ISAL------QESGLKFGIKEKEGAFYGPKIDFEIRDSLGRWWQLSTIQVDFNLPERFKL 394

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYA 568
            Y++    K  PVM+HRA++GSI+RF+ I++E+FKG LP WLS +Q  V  IT    EYA
Sbjct: 395 EYIDKDGIKKRPVMVHRAIYGSIDRFVAILLEHFKGKLPTWLSSVQVRVLPITDEVNEYA 454

Query: 569 QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
           +++ N ++   +  E D+  ET++ +I+    + +P I+I G KEASE ++ +R  G+  
Sbjct: 455 EKVLNDMRKRRIRAEIDYAGETLSKRIKNAYDQGVPYILIVGKKEASEGTVTVRARGNIE 514

Query: 629 TQKVSLLDAIPILTKESLPPDCQK 652
            + V     + +L  E    D ++
Sbjct: 515 VRNVKFEKFLELLITEIAQRDVEQ 538


>gi|301626888|ref|XP_002942619.1| PREDICTED: threonyl-tRNA synthetase, cytoplasmic-like [Xenopus
           (Silurana) tropicalis]
          Length = 683

 Score =  347 bits (890), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 202/606 (33%), Positives = 318/606 (52%), Gaps = 69/606 (11%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIRHSCAH 79
            T  D+A   S SLA+ AVA  +NG + DL+ P+ E  ++E +T +     A+  HS AH
Sbjct: 109 TTPYDIALQTSPSLARSAVAARVNGALYDLNRPLEEDCAVEFLTFDSREGQAIFWHSSAH 168

Query: 80  IMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQIEKKMQEIIARDSPFLK 138
           I+  A++  + E  +  GP  E+G++YD +          L  +E   +++I +  PF +
Sbjct: 169 ILGLALEQHY-EGCLCHGPSTENGYFYDIYLPNSTVLGSHLPDLETVCKDVIKQKLPFQR 227

Query: 139 QYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFF 198
             ++ E   ELF+  K  +K+  +E        T+YR G   DLCRGPHVR TGQ++   
Sbjct: 228 IEVAREDLLELFKYNK--FKIRTIED-KVDTCTTVYRCGSLVDLCRGPHVRHTGQIRAL- 283

Query: 199 KLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI 258
           KL+K + ++WR D  +  L R+YG ++   ++L ++    EE+  RDHRK+ R+ +L+  
Sbjct: 284 KLLKNSSSFWRSDPTQEALQRVYGISFPEGKQLKEWEKAQEEAINRDHRKIGRDQELYFF 343

Query: 259 AEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRAN 317
            +   G  F+  +G  I+  LI +++ +  K  + E+ TP + +  LW+ SGHW+ Y  N
Sbjct: 344 HDLSPGSCFFLPRGAHIYNVLIDFIKSEYRKRGFTEVITPNMYNNKLWETSGHWEHYGKN 403

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           MF+    ++T      F+LKPMNCPGH  +F+H  +S+RELP+RLA+FG ++RNE SG+L
Sbjct: 404 MFSFTVEEET------FSLKPMNCPGHCLMFDHRPRSWRELPLRLADFGVLHRNELSGTL 457

Query: 378 HGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGS 437
            GL RVR F QDDAH+FC+ EQ+  E     + + ++Y  FGF    + LSTRPE+ +G 
Sbjct: 458 SGLTRVRRFQQDDAHIFCSMEQLEGEINGCLDFLRTVYSVFGF-TFKLFLSTRPEQFMGE 516

Query: 438 DALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ 497
           + +W  AE  ++  L+                                            
Sbjct: 517 EEVWQQAEAELEKSLN-------------------------------------------- 532

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIV 557
             F LP    A           PVMIHRAV GS+ER + I+ EN+ G  PLWLSP Q +V
Sbjct: 533 -GFGLPKADGAVE--------RPVMIHRAVLGSVERMLAILAENYGGKWPLWLSPFQVMV 583

Query: 558 TTITSSAVEYAQEIANLLKSHHLSIETDF-RNETINYKIREHSIKKIPIIIICGDKEASE 616
             +  +   YA ++  ++      ++ D     T+N KIR+  + +   I++ GDKE   
Sbjct: 584 IPVGPNVESYAYKVQRMIHDAGFMVDLDTDHGTTLNKKIRKAQVAQYNFILVVGDKEKQN 643

Query: 617 RSIGIR 622
            ++ +R
Sbjct: 644 STVNVR 649


>gi|227826680|ref|YP_002828459.1| threonyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
 gi|259516736|sp|C3MUC7|SYT_SULIM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|227458475|gb|ACP37161.1| threonyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
          Length = 545

 Score =  347 bits (889), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 181/504 (35%), Positives = 292/504 (57%), Gaps = 22/504 (4%)

Query: 154 KEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSN 213
           K+A    +L ++P + N  +Y+ G    +       ST    K+F+++ ++  +    + 
Sbjct: 52  KKAINENVLANVPIENNQIVYK-GNKVSIIEDKVSISTNLNPKYFEILNISTHH---PNP 107

Query: 214 RPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKG 272
                RI G A+ T+++L  YL +LE++E+ DHR +  ++DLF   E+ GSG++ +H KG
Sbjct: 108 NEQYVRIRGVAFETEEQLKDYLTWLEKAEETDHRLIGEKLDLFSFHEEAGSGLVLFHPKG 167

Query: 273 WKIFQTLISYMRRKIKDD--YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
             I   LI++MR +I D   Y+E+ T  V    +W+ SGH+  YR  +       D    
Sbjct: 168 QTIRNELIAFMR-EINDSMGYQEVYTSHVFKTDIWKISGHYTLYRDKLIVFNMEGDE--- 223

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
              + +KPMNCP H+ ++    ++YR+LP+R +EFG VYR E  G L+GL+RVRGF QDD
Sbjct: 224 ---YGVKPMNCPAHILIYKSKPRTYRDLPIRFSEFGHVYRWEKKGELYGLLRVRGFVQDD 280

Query: 391 AHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK--LSTRPEKRVGSDALWDDAENIM 448
            H+F  ++Q+  E   + +  + ++  FGF+   +K  LSTRP++ +GSD LW+ A N +
Sbjct: 281 GHIFLREDQLREEIKMLISKTVEVWHKFGFKDDDIKPYLSTRPDESIGSDELWEKATNAL 340

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
              L       +  +  G+   EGAFYGPK ++ ++D++GR WQ  TIQVDFNLP RF  
Sbjct: 341 ISAL------QESGLKFGIKEKEGAFYGPKIDFEIRDSLGRWWQLSTIQVDFNLPERFKL 394

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYA 568
            Y++    K  PVM+HRA++GSI+RF+ I++E+FKG LP WLS +Q  V  IT    EYA
Sbjct: 395 EYIDKDGIKKRPVMVHRAIYGSIDRFVAILLEHFKGKLPTWLSSVQVRVLPITDEVNEYA 454

Query: 569 QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
           +++ N ++   +  E D+  ET++ +I+    + +P I+I G KEASE ++ +R  G+  
Sbjct: 455 EKVLNDMRKRRIRAEIDYAGETLSKRIKNAYDQGVPYILIVGKKEASEGTVTVRARGNIE 514

Query: 629 TQKVSLLDAIPILTKESLPPDCQK 652
            + V     + +L  E    D ++
Sbjct: 515 VRNVKFEKFLELLITEIGQRDVEQ 538


>gi|302788105|ref|XP_002975822.1| hypothetical protein SELMODRAFT_267898 [Selaginella moellendorffii]
 gi|300156823|gb|EFJ23451.1| hypothetical protein SELMODRAFT_267898 [Selaginella moellendorffii]
          Length = 420

 Score =  347 bits (889), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 171/410 (41%), Positives = 256/410 (62%), Gaps = 22/410 (5%)

Query: 216 MLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWK 274
           ML RIYGTAW T+++L  Y    EE+++RDHR+L +++++F I ED G G++FWH KG  
Sbjct: 1   MLQRIYGTAWQTEEQLKAYQTQKEEAKRRDHRRLGQDLEIFSIQEDAGGGLVFWHPKGAL 60

Query: 275 IFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMF-AVKCADDTIKDLR 332
           I   +  Y ++  ++  YE + TP +    LW++SGH D Y+ NMF  +K  ++      
Sbjct: 61  IRHLIEDYWKKVHLRRGYELLYTPHIAKAELWKRSGHLDFYKENMFEQIKIEEEF----- 115

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
            + L+PMNCP H+ ++   ++SYRELP++ AE G+VYR E SG+LHGL R      DDAH
Sbjct: 116 -YQLRPMNCPFHIQIYKDRVRSYRELPIKFAELGTVYRYELSGALHGLFR------DDAH 168

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
           +FC  EQ+  E   + +L   I   FGF+   + LST+PEK VGSD +W  A   +K   
Sbjct: 169 IFCLPEQIRGEIKSVLDLTEEILSQFGFQNYEINLSTKPEKAVGSDDIWHKATEALK--- 225

Query: 453 DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
           D I +        G+  G GAFYGPK +  ++DAIGR WQC TIQVDFNLP RF+  YV+
Sbjct: 226 DAISDKGW---TYGIDEGGGAFYGPKIDLKIEDAIGRKWQCSTIQVDFNLPERFDLTYVD 282

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIA 572
               +  P+MIHRA+FGSIERF+GI+IE++ G+ PLW++P+QA +  +T + + Y +++ 
Sbjct: 283 PSQARKQPIMIHRAIFGSIERFVGILIESYAGDFPLWIAPVQARLLPVTDTELPYCKQVL 342

Query: 573 NLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
             L+   +  E     E ++  IR   ++KIP++ + G KE   +++ +R
Sbjct: 343 ARLREKDIRAEIAC-GERLSKLIRNAEVQKIPLMAVVGPKEVEAQTLTVR 391


>gi|47479652|gb|AAH69346.1| TARSL2 protein [Homo sapiens]
 gi|47480952|gb|AAH69811.1| TARSL2 protein [Homo sapiens]
          Length = 466

 Score =  346 bits (888), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 180/445 (40%), Positives = 264/445 (59%), Gaps = 17/445 (3%)

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLC+GPHVR TG++K   K+ K +  YW G+     L RIYG ++   + +  +  F EE
Sbjct: 2   DLCKGPHVRHTGKIKTI-KIFKNSSTYWEGNPEMETLQRIYGISFPDNKMMRDWEKFQEE 60

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQV 299
           ++ RDHRK+ +E +LF   +   G  F+  +G  I+ TL  ++R +  K D+ E+ +P +
Sbjct: 61  AKNRDHRKIGKEQELFFFHDLSPGSCFFLPRGAFIYNTLTDFIREEYHKRDFTEVLSPNM 120

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +  LW+ SGHW  Y  NMF  +   DT      FALKPMNCPGH  +F H  +S+RE+P
Sbjct: 121 YNSKLWEASGHWQHYSENMFTFEIEKDT------FALKPMNCPGHCLMFAHRPRSWREMP 174

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R A+FG ++RNE SG+L GL RVR F QDDAH+FCT EQ+  E       + S+Y  FG
Sbjct: 175 IRFADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCTVEQIEEEIKGCLQFLQSVYSTFG 234

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F    + LSTRPE  +G   +W++AE  ++  L  +      ++N     G+GAFYGPK 
Sbjct: 235 F-SFQLNLSTRPENFLGEIEMWNEAEKQLQNSL--MDFGEPWKMNP----GDGAFYGPKI 287

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIGIM 538
           +  +KDAIGR  QC TIQ+DF LP RFN  YV+    +K  PV+IHRA+ GS+ER I I+
Sbjct: 288 DIKIKDAIGRYHQCATIQLDFQLPIRFNLTYVSKDGDDKKRPVIIHRAILGSVERMIAIL 347

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIRE 597
            EN+ G  P WLSP Q +V  +  +  +YA ++++         + D  +  T+N KIR 
Sbjct: 348 SENYGGKWPFWLSPRQVMVIPVGPTCEKYALQVSSEFFEEGFMADVDLDHSCTLNKKIRN 407

Query: 598 HSIKKIPIIIICGDKEASERSIGIR 622
             + +   I++ G+KE  + ++ +R
Sbjct: 408 AQLAQYNFILVVGEKEKIDNAVNVR 432


>gi|254993456|ref|ZP_05275646.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL J2-064]
          Length = 445

 Score =  346 bits (887), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 175/442 (39%), Positives = 268/442 (60%), Gaps = 18/442 (4%)

Query: 200 LMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLF-HI 258
           L+ VAGAYWRGDSN  ML RIYGTA+  +  L +++   +E+++RDHRKL +E+DLF + 
Sbjct: 1   LLSVAGAYWRGDSNNKMLQRIYGTAFFDKNGLKEFIQMQKEAKERDHRKLGKELDLFANS 60

Query: 259 AEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRAN 317
            E G G+  W  KG  I + +  Y+  ++ +  Y  + TP + +  L++ SGHWD Y  +
Sbjct: 61  IEVGQGLPLWLPKGATIRRVIERYIVDKEERLGYNHVYTPIMANVELYKTSGHWDHYHED 120

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           MF     D+         L+PMNCP H+ ++ + + SYRELP+R+AE G ++R E SG+L
Sbjct: 121 MFPTMKMDN-----EELVLRPMNCPHHMMIYKNDIHSYRELPIRIAELGMMHRYEMSGAL 175

Query: 378 HGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR----PEK 433
            GL RVRG T +DAHVF   +Q+ +E  ++  LI+ +YKDF  +    +LS R     EK
Sbjct: 176 SGLQRVRGMTLNDAHVFVRPDQIKDEFKRVVELILEVYKDFDIKDYSFRLSYRDPKNTEK 235

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
               DA+W+ A+ ++K  +D ++      ++     GE AFYGPK +  +K AIG++   
Sbjct: 236 YFDDDAMWEKAQAMLKSAMDEME------MDYFEAEGEAAFYGPKLDVQVKTAIGKEETL 289

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI 553
            T+Q+DF LP RF+  Y+    EK  PV+IHR V  ++ERF+  +IE +KG  P WL+P+
Sbjct: 290 STVQLDFLLPERFDLTYIGEDGEKHRPVVIHRGVVSTMERFVAYLIEEYKGAFPTWLAPV 349

Query: 554 QAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
           Q  +  + + A ++YA+ + + L+   L  E D RNE + YKIRE   KKIP  ++ GD+
Sbjct: 350 QMELIPVNADAHLDYAKGVQDKLQRAGLRAEVDDRNEKLGYKIREAQTKKIPYALVLGDQ 409

Query: 613 EASERSIGIRRFGSTTTQKVSL 634
           E    S+ +RR+GS  ++ + L
Sbjct: 410 EVEAGSVNVRRYGSKDSETMDL 431


>gi|325527705|gb|EGD04994.1| threonyl-tRNA synthetase [Burkholderia sp. TJI49]
          Length = 406

 Score =  346 bits (887), Expect = 9e-93,   Method: Compositional matrix adjust.
 Identities = 170/405 (41%), Positives = 247/405 (60%), Gaps = 14/405 (3%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHR L  +++LFH  ++  G IFWH +G  + + +  Y+R +++   + E+ TPQ++ + 
Sbjct: 5   DHRVLGNKLELFHQQDESPGAIFWHPRGMVLLRVVEDYIRARMRQAGFSEVRTPQIIARS 64

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+QSGHW+ +   MF+++  D      R + LKPM+CP HV +F  G++SYR+LPVR +
Sbjct: 65  LWEQSGHWEKFGRGMFSLQSDD------RPYCLKPMSCPCHVQIFRKGVRSYRDLPVRYS 118

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFG+V+R EPSG+LHGLMR R FTQDDAHV C  +Q+  E  +   L+ SIY DFGF   
Sbjct: 119 EFGAVHRAEPSGALHGLMRARAFTQDDAHVLCRPDQVEAEVARFCMLLKSIYADFGFGGF 178

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            V LSTRP  R G +A+WD AE ++         +    ++  V  GEGAFYGPK E+ L
Sbjct: 179 DVALSTRPAVRAGDEAVWDRAEAMLA------SAARAAGLDFSVRAGEGAFYGPKLEFHL 232

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D  GR WQCGTIQ+DF LP R  A YV     +  PVM+H AV GS+ERFIG+++E+++
Sbjct: 233 LDRQGRQWQCGTIQLDFVLPERLGAAYVAEDGARAVPVMLHHAVLGSLERFIGVLLEHYE 292

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G LP WL+P Q +V  I      +A  +A+  ++    +  DFR E +  KI +      
Sbjct: 293 GWLPTWLAPDQIVVANIGHDERAFADRVASAFEAIGCRVLRDFRAERLPRKIFDARALAA 352

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
           PI+ + G KEA   ++ + R  +  +Q +SL DA+  L + +  P
Sbjct: 353 PIVAVTGRKEALAGAVSL-RMRNGESQVLSLADALAHLKQHAHAP 396


>gi|323473769|gb|ADX84375.1| threonyl-tRNA synthetase [Sulfolobus islandicus REY15A]
          Length = 545

 Score =  345 bits (886), Expect = 9e-93,   Method: Compositional matrix adjust.
 Identities = 180/504 (35%), Positives = 291/504 (57%), Gaps = 22/504 (4%)

Query: 154 KEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSN 213
           K+A    +L ++P + N  +Y+ G    +       S     K+F+++ ++  +    + 
Sbjct: 52  KKAINENVLANVPIENNQIVYK-GNKVSIIEDKVSISNNLNPKYFEILNISTHH---PNP 107

Query: 214 RPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKG 272
                RI G A+ T+++L  YL +LE++E+ DHR +  ++DLF   E+ GSG++ +H KG
Sbjct: 108 NEQYVRIRGVAFETEEQLKDYLTWLEKAEETDHRLIGEKLDLFSFHEEAGSGLVLFHPKG 167

Query: 273 WKIFQTLISYMRRKIKDD--YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
             I   LI++MR +I D   Y+E+ T  V    +W+ SGH+  YR  +       D    
Sbjct: 168 QTIRNELIAFMR-EINDSMGYQEVYTSHVFKTDIWKISGHYTLYRDKLIVFNMEGDE--- 223

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
              + +KPMNCP H+ ++    ++YR+LP+R +EFG VYR E  G L+GL+RVRGF QDD
Sbjct: 224 ---YGVKPMNCPAHILIYKSKPRTYRDLPIRFSEFGHVYRWEKKGELYGLLRVRGFVQDD 280

Query: 391 AHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK--LSTRPEKRVGSDALWDDAENIM 448
            H+F  ++Q+  E   + +  + ++  FGF+   +K  LSTRP++ +GSD LW+ A N +
Sbjct: 281 GHIFLREDQLREEIKMLISKTVEVWHKFGFKDDDIKPYLSTRPDESIGSDELWEKATNAL 340

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
              L       +  +  G+   EGAFYGPK ++ ++D++GR WQ  TIQVDFNLP RF  
Sbjct: 341 ISAL------QESGLKFGIKEKEGAFYGPKIDFEIRDSLGRWWQLSTIQVDFNLPERFKL 394

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYA 568
            Y++    K  PVM+HRA++GSI+RF+ I++E+FKG LP WLS +Q  V  IT    EYA
Sbjct: 395 EYIDKDGIKKRPVMVHRAIYGSIDRFVAILLEHFKGKLPTWLSSVQVRVLPITDEVNEYA 454

Query: 569 QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
           +++ N ++   +  E D+  ET++ +I+    + +P I+I G KEASE ++ +R  G+  
Sbjct: 455 EKVLNDMRKRRIRAEIDYAGETLSKRIKNAYDQGVPYILIVGKKEASEGTVTVRARGNIE 514

Query: 629 TQKVSLLDAIPILTKESLPPDCQK 652
            + V     + +L  E    D ++
Sbjct: 515 VRNVKFEKFLELLITEIAQRDVEQ 538


>gi|297279894|ref|XP_002808285.1| PREDICTED: LOW QUALITY PROTEIN: threonyl-tRNA synthetase,
           mitochondrial-like [Macaca mulatta]
          Length = 669

 Score =  345 bits (886), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 215/638 (33%), Positives = 321/638 (50%), Gaps = 77/638 (12%)

Query: 2   PSDIKLTFPDGS-IKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
           P  IK++ P G  I     + T   +A  IS +LA  AVA  +NG+  DL  P+   S +
Sbjct: 58  PRTIKISLPGGQKIDAVAWNTTPYQLARQISSTLADTAVAAQVNGEPYDLERPLETDSDL 117

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF--DKEQPFSSD 117
             +T + P   AV  HS  H++  A +     V +  GP  E GFY+DF     +     
Sbjct: 118 RFLTFDSPEGKAVFWHSSTHVLGAAAEQFLGAV-LCRGPSTEYGFYHDFFLGNGRTVRGS 176

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           EL  +E+  QE+ A   PF          R L  S+          S+            
Sbjct: 177 ELPVLERICQELTAAAQPF----------RRLEASRXXXXXXXNSSSL------------ 214

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
            W         RS+G  +    L +V+G                  ++ T + L+ +  +
Sbjct: 215 -W---------RSSGAPE---TLQRVSG-----------------ISFPTTELLSAWEAW 244

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINT 296
            EE+E RDHR++ +E +LF   E   G  F+  +G +++  L++++R +  +  + E+ T
Sbjct: 245 REEAELRDHRRIGKEQELFFFHELSPGSCFFLPRGTRVYNALVAFIRAEYARRGFSEVKT 304

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCA-----------DDTIKDLRTFALKPMNCPGHV 345
           P +    LW+QSGHW+ Y+ +MFAV+ +           D T       ALKPMNCP H 
Sbjct: 305 PTLFSTKLWEQSGHWEHYQEDMFAVQPSGSDRPASSQSDDSTRHTTDILALKPMNCPAHC 364

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +F H  +S+RELP+RLA+FG+++R E SG L GL R+R F QDDAH+FCT +Q+  E  
Sbjct: 365 LMFAHRPRSWRELPLRLADFGALHRAEASGGLGGLTRLRCFQQDDAHIFCTTDQLEAEIQ 424

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
              + + S+Y   GF    + LSTRP   +G   LWD AE +++  L          +N+
Sbjct: 425 SCLDFLRSVYAVLGF-SFRLALSTRPSGFLGDPCLWDQAEQVLQRALKEFGEPWD--LNS 481

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
               G+GAFYGPK +  L DA+GR  QCGTIQ+DF LP RF+  Y         PV+IHR
Sbjct: 482 ----GDGAFYGPKIDVHLHDALGRPHQCGTIQLDFQLPLRFDLQYKGQAGALERPVLIHR 537

Query: 526 AVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD 585
           AV GS+ER +G++ E+  G  PLWLSP Q +V  + +   EYA+E    L++  L  + D
Sbjct: 538 AVLGSVERLLGVLAESCGGKWPLWLSPFQVVVIPVGTEQEEYAREAQQSLRAAGLVSDLD 597

Query: 586 FRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
             +  T++ +IR   +       + G KE S+R++ IR
Sbjct: 598 ADSGLTLSRRIRRAQLAHYNFQFVVGQKEQSKRTVNIR 635


>gi|307103976|gb|EFN52232.1| hypothetical protein CHLNCDRAFT_49107 [Chlorella variabilis]
          Length = 570

 Score =  345 bits (885), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 210/623 (33%), Positives = 320/623 (51%), Gaps = 84/623 (13%)

Query: 25  DVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAE 83
           +VA  IS+ LAKK V   ++G V DL  P+  + ++++++ ED     V +         
Sbjct: 2   EVANQISKGLAKKCVVAKVDGCVWDLLRPLEGDCALQLLSFEDAEGKEVAQKRAGQAEFG 61

Query: 84  AVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSH 143
           A        Q AIGP    GF Y          D         +E I     F +  +S 
Sbjct: 62  A--------QPAIGPRSGRGFLYGL-----LLGD---------KETIKERQVFERVVVSR 99

Query: 144 EKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKV 203
           E+A  +FE  K  +KVEI+  +PA   ++LY+ G   DLC GPHV +TG +K        
Sbjct: 100 EEALSMFEENK--FKVEIISDLPADAVISLYKVGPMVDLCHGPHVPNTGLLKA------- 150

Query: 204 AGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGS 263
                R D NR  L R+Y   +  ++EL +Y + +EE++KRDHR                
Sbjct: 151 -----RADVNREPLQRVYAITFPDEKELKEYQHRMEEAKKRDHRN--------------- 190

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMF--AV 321
            V F  +K W+                YEE+ TP + +  LW+ SGH D YR NMF  +V
Sbjct: 191 -VDFMRQKYWEY--------------GYEEVVTPNIFNFDLWKVSGHADHYRENMFLFSV 235

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           + A+        + LKPMNCPGH  +F +  +SYRELP+RLA+FG ++RNE SG+L GL 
Sbjct: 236 EKAE--------WGLKPMNCPGHCLMFANRNRSYRELPLRLADFGVLHRNEFSGALQGLT 287

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALW 441
           RVR F QDDAH+FC ++Q+  E      ++  +Y  FG +  M  LSTRPE  +G   +W
Sbjct: 288 RVRRFQQDDAHIFCRQDQVKAEISSYLKMMGEVYDAFGLDYKMA-LSTRPEGYLGELEVW 346

Query: 442 DDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFN 501
           + AE  ++  L+      +  +N G    +GAFYGPK +  + DA+ R +QC T+Q+DF 
Sbjct: 347 NQAEAALEEALNATGREWE--MNPG----DGAFYGPKIDITVFDALRRKYQCATVQLDFQ 400

Query: 502 LPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT 561
            P RFN  YV     +  PV++HRA+ GS ER   I+ E++ G  PLW+SP Q ++  I+
Sbjct: 401 FPIRFNLEYVAEDGSRQRPVIVHRAILGSAERMFAILTEHWGGKWPLWISPRQVMIVPIS 460

Query: 562 SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
            +  +YA  +   L+S    ++ D  +  +  K+RE  + +   I++ G++E    ++ +
Sbjct: 461 EAVYDYASAVRRQLRSAGFHVDADMADRKMQKKVREAQLSQYNYILVVGEEERVAGTVNV 520

Query: 622 RRFGSTTTQKVSLLDAIPILTKE 644
           R   +      SL   I ++++E
Sbjct: 521 RTRDNQVHGMHSLAGVIDVMSRE 543


>gi|328774228|gb|EGF84265.1| hypothetical protein BATDEDRAFT_8061 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 581

 Score =  345 bits (884), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 206/585 (35%), Positives = 317/585 (54%), Gaps = 44/585 (7%)

Query: 71  AVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           +V+ HS AH++  A++S +  +  +  GP  + GF+YD          E  +I  K Q++
Sbjct: 2   SVLYHSTAHLLGWALESHYGDDCLLTNGPATDQGFFYDS------LLIEGGEIRTKQQKV 55

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
             +   F    ++ + A  +F      +K+  L  IPA E V+LYR G++ DLCRGPHV 
Sbjct: 56  STQHLAFTCIQVTRDVAARMF--AYSPFKLSYLSKIPASETVSLYRCGDFIDLCRGPHVL 113

Query: 190 STGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKL 249
           +T  + K  KL+    + W+  S    LSR+ G ++++ + L ++    +E+ KRDHR +
Sbjct: 114 NTKAINKV-KLLHTGASQWQTISPHS-LSRVSGISFSSGKALREWTLQRQEASKRDHRLI 171

Query: 250 AREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQS 308
            ++  LF+ +    G  F+   G +I Q L  ++R +  K  ++EI TP V ++ LW++S
Sbjct: 172 GQKQSLFYFSPLSLGAPFFLPHGTRIIQRLTDFLRHEYRKYGFDEIVTPLVFNKSLWEKS 231

Query: 309 GHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV 368
           GHW +Y+ ++       D + D    ALKPMNCPGH  +F+   +SYR+LP+R AEF  +
Sbjct: 232 GHWKNYKEDITV-----DQLNDADIQALKPMNCPGHCLLFSSTSRSYRDLPIRYAEFSPL 286

Query: 369 YRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY-KDFGFEKIMVKL 427
           +RNE SG+L GL RVR F QDD H+FCT  Q+  E       I ++Y K   F +  + L
Sbjct: 287 HRNEASGALTGLTRVRKFHQDDGHIFCTPSQIAQEIQSTLKFIDTMYTKILHFPQYTLAL 346

Query: 428 STRPEK-RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDA 486
           STRPE   VG+   W+ AE  +K  L          IN     G+GAFYGPK +  ++DA
Sbjct: 347 STRPESGHVGTLTQWEAAETALKEALTQFGKPWT--INH----GDGAFYGPKIDIKVRDA 400

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHS-----EKCHPVMIHRAVFGSIERFIGIMIEN 541
           IGRD Q  T+Q+DF LP +F   Y    +         PVMIHRAV GS+ER + I+ E+
Sbjct: 401 IGRDHQTATVQLDFQLPKQFQLQYSTGKTGPEDAAMETPVMIHRAVLGSVERMLAILAEH 460

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLK-----------SHHLSIETDFRNET 590
           + G  P W+SP QAIV     +  EYAQ + N +            S +  IE D  +  
Sbjct: 461 YGGKWPFWMSPRQAIVIPTNKTLNEYAQSVKNNIANPSELDGSNSCSAYYHIEVDDSDHL 520

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
           ++ ++RE  + +   I++ GDKE    ++ +R   S T +++ L+
Sbjct: 521 LSKRVREAQLLQFNYILVVGDKEQETGTVNVR---SRTGKQLGLM 562


>gi|227829326|ref|YP_002831105.1| threonyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
 gi|259516733|sp|C3MKT5|SYT_SULIL RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|227455773|gb|ACP34460.1| threonyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
          Length = 545

 Score =  344 bits (883), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 180/504 (35%), Positives = 291/504 (57%), Gaps = 22/504 (4%)

Query: 154 KEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSN 213
           K+A    +L ++  + N  +Y+ G    +       ST    K+F+++ ++  +    + 
Sbjct: 52  KKAINENVLANVSIENNQIVYK-GNKVSIIEDKVSISTNLNPKYFEILNISTHH---PNP 107

Query: 214 RPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKG 272
                RI G A+ T+++L  YL +LE++E+ DHR +  ++DLF   E+ GSG++ +H KG
Sbjct: 108 NEQYVRIRGVAFETEEQLKDYLTWLEKAEETDHRLIGEKLDLFSFHEEAGSGLVLFHPKG 167

Query: 273 WKIFQTLISYMRRKIKDD--YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
             I   LI++MR +I D   Y+E+ T  V    +W+ SGH+  YR  +       D    
Sbjct: 168 QTIRNELIAFMR-EINDSMGYQEVYTSHVFKTDIWKISGHYTLYRDKLIVFNMEGDE--- 223

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
              + +KPMNCP H+ ++    ++YR+LP+R +EFG VYR E  G L+GL+RVRGF QDD
Sbjct: 224 ---YGVKPMNCPAHILIYKSKPRTYRDLPIRFSEFGHVYRWEKKGELYGLLRVRGFVQDD 280

Query: 391 AHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK--LSTRPEKRVGSDALWDDAENIM 448
            H+F  ++Q+  E   + +  + ++  FGF+   +K  LSTRP++ +GSD LW+ A N +
Sbjct: 281 GHIFLREDQLREEIKMLISKTVEVWHKFGFKDDDIKPYLSTRPDESIGSDELWEKATNAL 340

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
              L       +  +  G+   EGAFYGPK ++ ++D++GR WQ  TIQVDFNLP RF  
Sbjct: 341 ISAL------QESGLKFGIKEKEGAFYGPKIDFEIRDSLGRWWQLSTIQVDFNLPERFKL 394

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYA 568
            Y++    K  PVM+HRA++GSI+RF+ I++E+FKG LP WLS +Q  V  IT    EYA
Sbjct: 395 EYIDKDGIKKRPVMVHRAIYGSIDRFVAILLEHFKGKLPTWLSSVQVRVLPITDEVNEYA 454

Query: 569 QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
           +++ N ++   +  E D+  ET++ +I+    + +P I+I G KEASE ++ +R  G+  
Sbjct: 455 EKVLNDMRKRRIRAEIDYAGETLSKRIKNAYDQGVPYILIVGKKEASEGTVTVRARGNIE 514

Query: 629 TQKVSLLDAIPILTKESLPPDCQK 652
            + V     + +L  E    D ++
Sbjct: 515 VRNVKFEKFLELLITEIAQRDVEQ 538


>gi|15899227|ref|NP_343832.1| threonyl-tRNA synthetase [Sulfolobus solfataricus P2]
 gi|229578099|ref|YP_002836497.1| threonyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
 gi|229583311|ref|YP_002841710.1| threonyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
 gi|22654132|sp|Q97VW8|SYT_SULSO RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|259516740|sp|C3NMY1|SYT_SULIN RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|259516744|sp|C3N9B3|SYT_SULIY RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|13815789|gb|AAK42622.1| Threonyl-tRNA synthetase (thrS) [Sulfolobus solfataricus P2]
 gi|228008813|gb|ACP44575.1| threonyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
 gi|228014027|gb|ACP49788.1| threonyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
          Length = 545

 Score =  344 bits (882), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 180/504 (35%), Positives = 291/504 (57%), Gaps = 22/504 (4%)

Query: 154 KEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSN 213
           K+A    +L ++  + N  +Y+ G    +       ST    K+F+++ ++  +    + 
Sbjct: 52  KKAINENVLANVSIENNQIVYK-GNKVSIIEDKVSISTNLNPKYFEILNISTHH---PNP 107

Query: 214 RPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKG 272
                RI G A+ T+++L  YL +LE++E+ DHR +  ++DLF   E+ GSG++ +H KG
Sbjct: 108 NEQYVRIRGVAFETEEQLKDYLSWLEKAEETDHRLIGEKLDLFSFHEEAGSGLVLFHPKG 167

Query: 273 WKIFQTLISYMRRKIKDD--YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
             I   LI++MR +I D   Y+E+ T  V    +W+ SGH+  YR  +       D    
Sbjct: 168 QTIRNELIAFMR-EINDSMGYQEVYTSHVFKTDIWKISGHYTLYRDKLIVFNMEGDE--- 223

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
              + +KPMNCP H+ ++    ++YR+LP+R +EFG VYR E  G L+GL+RVRGF QDD
Sbjct: 224 ---YGVKPMNCPAHILIYKSKPRTYRDLPIRFSEFGHVYRWEKKGELYGLLRVRGFVQDD 280

Query: 391 AHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK--LSTRPEKRVGSDALWDDAENIM 448
            H+F  ++Q+  E   + +  + ++  FGF+   +K  LSTRP++ +GSD LW+ A N +
Sbjct: 281 GHIFLREDQLREEIKMLISKTVEVWHKFGFKDDDIKPYLSTRPDESIGSDELWEKATNAL 340

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
              L       +  +  G+   EGAFYGPK ++ ++D++GR WQ  TIQVDFNLP RF  
Sbjct: 341 ISAL------QESGLKFGIKEKEGAFYGPKIDFEIRDSLGRWWQLSTIQVDFNLPERFKL 394

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYA 568
            Y++    K  PVM+HRA++GSI+RF+ I++E+FKG LP WLS +Q  V  IT    EYA
Sbjct: 395 EYIDKDGIKKRPVMVHRAIYGSIDRFVAILLEHFKGKLPTWLSSVQVRVLPITDEVNEYA 454

Query: 569 QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
           +++ N ++   +  E D+  ET++ +I+    + +P I+I G KEASE ++ +R  G+  
Sbjct: 455 EKVLNDMRKRRIRAEIDYAGETLSKRIKNAYDQGVPYILIVGKKEASEGTVTVRARGNIE 514

Query: 629 TQKVSLLDAIPILTKESLPPDCQK 652
            + V     + +L  E    D ++
Sbjct: 515 VRNVKFEKFLELLITEIAQRDVEQ 538


>gi|284996685|ref|YP_003418452.1| threonyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5]
 gi|284444580|gb|ADB86082.1| threonyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5]
          Length = 545

 Score =  344 bits (882), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 180/504 (35%), Positives = 291/504 (57%), Gaps = 22/504 (4%)

Query: 154 KEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSN 213
           K+A    +L ++  + N  +Y+ G    +       ST    K+F+++ ++  +    + 
Sbjct: 52  KKAINENVLANVSIENNQIVYK-GNKVSIIEDKVSISTNLNPKYFEILNISTHH---PNP 107

Query: 214 RPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKG 272
                RI G A+ T+++L  YL +LE++E+ DHR +  ++DLF   E+ GSG++ +H KG
Sbjct: 108 NEQYVRIRGVAFETEEQLKDYLTWLEKAEETDHRLIGEKLDLFSFHEEAGSGLVLFHPKG 167

Query: 273 WKIFQTLISYMRRKIKDD--YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
             I   LI++MR +I D   Y+E+ T  V    +W+ SGH+  YR  +       D    
Sbjct: 168 QTIRNELIAFMR-EINDSMGYQEVYTSHVFKTDIWKISGHYTLYRDKLIVFNMEGDE--- 223

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
              + +KPMNCP H+ ++    ++YR+LP+R +EFG VYR E  G L+GL+RVRGF QDD
Sbjct: 224 ---YGVKPMNCPAHILIYKSKPRTYRDLPIRFSEFGHVYRWEKKGELYGLLRVRGFVQDD 280

Query: 391 AHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK--LSTRPEKRVGSDALWDDAENIM 448
            H+F  ++Q+  E   + +  + ++  FGF+   +K  LSTRP++ +GSD LW+ A N +
Sbjct: 281 GHIFLREDQLREEIKMLISKTVEVWHKFGFKDDDIKPYLSTRPDESIGSDELWEKATNAL 340

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
              L       +  +  G+   EGAFYGPK ++ ++D++GR WQ  TIQVDFNLP RF  
Sbjct: 341 ISAL------QESGLKFGIKEKEGAFYGPKIDFEIRDSLGRWWQLSTIQVDFNLPERFKL 394

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYA 568
            Y++    K  PVM+HRA++GSI+RF+ I++E+FKG LP WLS +Q  V  IT    EYA
Sbjct: 395 EYIDKDGIKKRPVMVHRAIYGSIDRFVAIILEHFKGKLPTWLSSVQVRVLPITDEVNEYA 454

Query: 569 QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
           +++ N ++   +  E D+  ET++ +I+    + +P I+I G KEASE ++ +R  G+  
Sbjct: 455 EKVLNDMRKRRIRAEIDYAGETLSKRIKNAYDQGVPYILIVGKKEASEGTVTVRARGNIE 514

Query: 629 TQKVSLLDAIPILTKESLPPDCQK 652
            + V     + +L  E    D ++
Sbjct: 515 VRNVKFEKFLELLITEIAQRDVEQ 538


>gi|309805191|ref|ZP_07699243.1| threonine--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
 gi|308165425|gb|EFO67656.1| threonine--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
          Length = 461

 Score =  343 bits (881), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 175/462 (37%), Positives = 272/462 (58%), Gaps = 18/462 (3%)

Query: 190 STGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKL 249
           +TG++K F KL+ VAGAYW+G S+ PML RI+GTA+    +L   L   E+ ++RDHR +
Sbjct: 3   NTGKLKHF-KLLSVAGAYWQGKSSNPMLQRIFGTAFFKDADLKADLQRREDIKERDHRTI 61

Query: 250 AREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQ 307
            R++DLF +  + G+G+ +W  KG  I + +  Y+  +++ D Y+ + TP +++   ++ 
Sbjct: 62  GRDLDLFFVDPKVGAGLPYWMPKGATIRRVIERYIIDKEVADGYQHVYTPVLMNLDAYKT 121

Query: 308 SGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGS 367
           SGHW  YR +MF        + D     L+PMNCP H+ ++NH ++SYRELP+R+AE G 
Sbjct: 122 SGHWAHYREDMFPPM----DMGDGEMLELRPMNCPSHIQIYNHHIRSYRELPIRIAELGM 177

Query: 368 VYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKL 427
           ++R E SG+L GL RVR  T +D H F   +Q+ +E  KI  LI+ +Y+DF       +L
Sbjct: 178 MHRYEKSGALSGLQRVREMTLNDGHTFVELDQVQSEFAKILKLIMEVYRDFDITDYYFRL 237

Query: 428 STR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           S R     +K   +D +W+ ++ ++KG +D +       +      GE AFYGPK +   
Sbjct: 238 SYRDPKNTDKYFANDEMWERSQKMLKGAMDDLG------LEYVEAEGEAAFYGPKLDIQT 291

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           K A+G D    TIQ+DF LP RFN  YV    E+  PVM+HR + G++ERFI  + E +K
Sbjct: 292 KTALGNDETMSTIQLDFMLPERFNLSYVGKDGEEHRPVMVHRGIVGTMERFIAYLTEIYK 351

Query: 544 GNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
           G  P WL+P+Q  +  + + A  EYAQ + + L       E DFRNE + YKIRE   +K
Sbjct: 352 GAFPTWLAPLQVKIIPVNNDAHGEYAQNVKDQLMKLGFRAEVDFRNEKLGYKIREAQTQK 411

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P  ++ GD E    S+ +R++GS   +  +L + +  L+ +
Sbjct: 412 VPYTLVLGDDELQHNSVNVRKYGSEDQESKALSEFVSELSAD 453


>gi|294499151|ref|YP_003562851.1| threonyl-tRNA synthetase [Bacillus megaterium QM B1551]
 gi|294349088|gb|ADE69417.1| threonyl-tRNA synthetase [Bacillus megaterium QM B1551]
          Length = 405

 Score =  343 bits (879), Expect = 7e-92,   Method: Compositional matrix adjust.
 Identities = 173/406 (42%), Positives = 256/406 (63%), Gaps = 14/406 (3%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQ 298
           E+EKR+H+KL +E++LF   E+  G+ F+   G  I   L +Y ++K  K  Y+EI TP 
Sbjct: 6   EAEKRNHQKLGQELELFMSIEEAPGMPFFLPNGMIIRNELENYWKQKHYKAGYQEIKTPI 65

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++ Q LW+QSGHW+ Y  NM+          D + +A+KPMNCPG + +F+   +SYREL
Sbjct: 66  MMKQELWEQSGHWEHYHENMYFSNV------DEQNYAIKPMNCPGAILLFSSKRRSYREL 119

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R AE G V+R+E SGSL+GL+RVR FTQDDAH+F    Q+  E  +I   I   Y  F
Sbjct: 120 PIRYAELGLVHRHELSGSLNGLLRVRSFTQDDAHLFVELSQIEAEISRILAFIHDFYSHF 179

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+   V+LSTRPEK +G+   W+ AE  ++ VL      S+  ++  V  G+GAFYGPK
Sbjct: 180 GFD-YKVELSTRPEKFMGNIETWNQAEKSLQSVL------SEKGLDYQVNEGDGAFYGPK 232

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++ + D++GR WQCGT+Q+DF +P +F+  Y+   ++   PVMIHRA++GS+ERF+ I+
Sbjct: 233 IDFHILDSLGRSWQCGTVQLDFLMPEKFDCMYIGEDNKPHRPVMIHRAIYGSVERFMAIL 292

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+++G  PLWL+P+Q  +  I    VEYA ++ + L+     +E D R E I  KIRE 
Sbjct: 293 IEHYEGQFPLWLAPVQLKLLPIAPPHVEYAYKVKHELELKGYRVEVDDRIEKIGLKIREA 352

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            ++K+P + + GDKE    S+ +R+ G      VS+ +A   L KE
Sbjct: 353 EMQKVPYMAVIGDKEVENESLAMRKHGKKNIGTVSMEEAAVHLNKE 398


>gi|134292577|ref|YP_001116313.1| threonyl-tRNA synthetase [Burkholderia vietnamiensis G4]
 gi|134135734|gb|ABO56848.1| threonyl-tRNA synthetase [Burkholderia vietnamiensis G4]
          Length = 402

 Score =  342 bits (878), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 171/401 (42%), Positives = 241/401 (60%), Gaps = 15/401 (3%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHR L  ++DLFH  ++  G IFWH +G  +++ +  Y+R +++   + E+ TPQ+L + 
Sbjct: 5   DHRVLGNKLDLFHQQDESPGGIFWHPRGMVLYRVIEEYIRVRMRQAGFSEVRTPQILSRD 64

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SGHW+ +  NMF+++       D   + LKPM+CP HV +F  G +SYR+LP+R  
Sbjct: 65  LWERSGHWEKFGPNMFSLE------SDRNPYCLKPMSCPCHVQIFKKGSRSYRDLPIRYC 118

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFG+V+R EPSG+LHGLMR R FTQDDAHV C  +Q+ +E  +   L+ +IY DFGF + 
Sbjct: 119 EFGAVHRAEPSGALHGLMRARAFTQDDAHVLCLPDQIEDEVARFCKLLKAIYADFGFGEC 178

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            V LSTRP  R G DA+WD +E ++         +    +   +L GEGAFYGPK E+ L
Sbjct: 179 DVALSTRPPVRAGDDAVWDRSEAMLA------SAARAAGLEFAILAGEGAFYGPKLEFHL 232

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D  GR WQCGTIQ+DF LP R  A YV     K  PVM+H AV GS+ERFIGI++E+++
Sbjct: 233 VDRQGRKWQCGTIQLDFVLPERLGASYVAEDGAKATPVMLHHAVLGSLERFIGILLEHYE 292

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G LP WL+P Q +V  I      +A   A+  +     +  DFR E +  KI + +    
Sbjct: 293 GWLPTWLAPDQIVVANIGDDHRAFADRAASAFEDIGCRVLRDFRAERLPRKIFDATELAA 352

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           PI+ I G KEA    + +R  G    Q V  +DA     K+
Sbjct: 353 PIVAIAGRKEALAGEVSLRMRGG--EQHVMTIDAALAFLKQ 391


>gi|124804231|ref|XP_001347941.1| threonine -- tRNA ligase, putative [Plasmodium falciparum 3D7]
 gi|23496195|gb|AAN35854.1|AE014840_2 threonine -- tRNA ligase, putative [Plasmodium falciparum 3D7]
          Length = 1013

 Score =  342 bits (878), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 185/469 (39%), Positives = 282/469 (60%), Gaps = 22/469 (4%)

Query: 49  DLSDPVREGS-IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD 107
           DL+ P+     +E I  +      +  HS AHI+  +++ ++    + IGP +++GFYYD
Sbjct: 335 DLNVPLLGNCRVEFINIQSEEGQKIFWHSSAHILGSSLEKLFGGF-LTIGPALKEGFYYD 393

Query: 108 -FDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES-I 165
            F      ++++  +IE +  +++  + PF K   + E+A ELF+     +K+E++ S I
Sbjct: 394 IFLNNFSINNEDYKRIEDEFNKLVKDNVPFEKVICTKEEALELFDY--NPFKLELIRSKI 451

Query: 166 PAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAW 225
           P  +  ++YR G + DLC GPH+++TG+VK F K++K + AYW G      L R+YG ++
Sbjct: 452 PDNKKTSVYRCGNFIDLCLGPHIKNTGKVKTF-KVLKNSSAYWLGQKENDSLQRVYGISF 510

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMR 284
             + EL +YL FLEE++KRDHR + + ++LF   ++ S G  FW   G KI+  LI ++R
Sbjct: 511 QKKSELVEYLKFLEEAKKRDHRNVGKILNLFFFEKETSPGSCFWLPHGSKIYNKLIEFIR 570

Query: 285 RKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPG 343
           ++ +   YEE+ +P V    LW+ SGH+ +Y+  MF     +      + + +KPMNCPG
Sbjct: 571 KEYRIRKYEEVISPNVFSCDLWKTSGHYQNYKDCMFLFNVEN------KEWGMKPMNCPG 624

Query: 344 HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE 403
           H  +F     SYR LPVRLA+FG ++RNE SGSL GL RVR F QDD+H+FC+ E +  E
Sbjct: 625 HCLMFKQLNVSYRSLPVRLADFGVLHRNEISGSLSGLTRVRRFQQDDSHIFCSMEHIKQE 684

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            L   N +  +Y  FGF K  + LSTRP+K +G  + W+ AE  +K  L     + Q +I
Sbjct: 685 VLNTLNFLFYVYNLFGF-KYELFLSTRPKKFIGQISTWNLAEQHLKDALYAA--NVQWKI 741

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
           N     G+GAFYGPK + ++KD++ R  QCGTIQ+DF LP RFN  Y N
Sbjct: 742 NE----GDGAFYGPKIDILVKDSLNRTHQCGTIQLDFQLPVRFNLQYKN 786



 Score = 91.7 bits (226), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 43/113 (38%), Positives = 66/113 (58%)

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH 579
           P++IHRA+ GS+ERF+ I+IE+  G LP WLSP QAIV  I     +YA  +   L ++ 
Sbjct: 868 PIIIHRAILGSVERFVAILIEHTAGKLPFWLSPRQAIVLPIGDKYNDYANYVYETLHNNM 927

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
             ++ D    T+N KIRE  +K+   I++ G+KE +  ++ +R       Q V
Sbjct: 928 FDVDLDTSVNTLNKKIREAQLKQFNYILVVGEKELTTNTVTLRDRDDQNNQHV 980


>gi|330834508|ref|YP_004409236.1| threonyl-tRNA synthetase [Metallosphaera cuprina Ar-4]
 gi|329566647|gb|AEB94752.1| threonyl-tRNA synthetase [Metallosphaera cuprina Ar-4]
          Length = 562

 Score =  341 bits (874), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 178/447 (39%), Positives = 266/447 (59%), Gaps = 19/447 (4%)

Query: 196 KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDL 255
           K+FK++ V+  +    S R  L R+ G A+ T ++L  YL +LE++ + DHR +   MDL
Sbjct: 110 KYFKIINVSVHH---PSERAQLVRVRGVAFETDEQLQDYLQWLEKASETDHRIIGERMDL 166

Query: 256 FHI-AEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDS 313
           F    E G G++ +H KG  I   +ISYMR       Y+E+ T  V    LW+ SGH+D+
Sbjct: 167 FSFHDETGPGLVLFHPKGQLIRNEMISYMREINSSMGYQEVYTSHVFRTVLWKISGHYDT 226

Query: 314 YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP 373
           YR  M      DD +       +KPMNCP H+ ++   ++SYR+LP+R +EFG+VYR E 
Sbjct: 227 YRDKMLIFNKDDDEL------GIKPMNCPAHILIYKSRVRSYRDLPLRFSEFGNVYRWEK 280

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF--EKIMVKLSTRP 431
            G L+GL+R RGFTQDD H+F  ++Q+ +E   + N  + +   FGF  + + + LSTRP
Sbjct: 281 KGELYGLLRTRGFTQDDGHIFLREDQIRDEVKTLINKTLEVLNKFGFRGDDVRINLSTRP 340

Query: 432 EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDW 491
           ++ +GSD  W+ A N +  VL  +   +Q  I       EGAFYGPK ++ ++D++ R W
Sbjct: 341 DESIGSDEQWEKATNSLLNVLKEL--GTQFIIKEK----EGAFYGPKIDFDIRDSLNRWW 394

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLS 551
           Q  TIQVDFNLP RF   YV+    K  PVMIHRA++GS++R I I++E+F+G LP WLS
Sbjct: 395 QLSTIQVDFNLPERFKLEYVDEDGSKKRPVMIHRAIYGSLDRMIAILLEHFRGRLPAWLS 454

Query: 552 PIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
           P+Q  +  I+    EYA +I  +L+ + +  E D   ET++ +I+    + +P ++I G 
Sbjct: 455 PVQVRILPISEENQEYANKILVMLRENGIRGELDPSGETLSKRIKRAYDEGVPYLVIVGR 514

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAI 638
           KEA E  + IR  G+   + V L D I
Sbjct: 515 KEALEEKVTIRSRGNVEVKGVPLKDFI 541


>gi|115376687|ref|ZP_01463915.1| threonyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|115366304|gb|EAU65311.1| threonyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
          Length = 372

 Score =  339 bits (870), Expect = 7e-91,   Method: Compositional matrix adjust.
 Identities = 162/364 (44%), Positives = 230/364 (63%), Gaps = 13/364 (3%)

Query: 265 VIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKC 323
           ++FWH +G+ ++Q L   +RR++    Y E+ TPQVL Q +W+ SGHW ++R  MF +  
Sbjct: 1   MVFWHPRGFVLYQLLEERVRRELASGGYREVRTPQVLGQRIWESSGHWQNFRHGMFVLDD 60

Query: 324 ADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRV 383
            +      R FA+KP++CPGH+ +F     S+R LP+R+AEFG V+RNE SG+LHGL R+
Sbjct: 61  GE------RPFAMKPVSCPGHIQLFQRLAPSFRSLPLRMAEFGLVHRNESSGALHGLFRL 114

Query: 384 RGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDD 443
           R FTQDD H+FC +EQ+ +E       + + Y+ FGFE   V  S+RP +R G DALWD 
Sbjct: 115 RQFTQDDGHIFCMEEQVADEVAAFCRSLRAFYRGFGFEDAQVAFSSRPAQRAGDDALWDR 174

Query: 444 AENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLP 503
           AE  +      +       ++  +  GEGAFYGPK E+ILKD  GRDWQCGTIQ+DF LP
Sbjct: 175 AEAALLEAAGRVG------LDCRMQPGEGAFYGPKLEFILKDRSGRDWQCGTIQLDFVLP 228

Query: 504 SRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSS 563
            RF+  YV+S  EK  P M+HRA+FGS+ERF+GI++E+ +G LP WL+P Q  V  + + 
Sbjct: 229 ERFDLHYVDSGGEKRRPAMLHRAIFGSVERFLGILLEHHQGVLPAWLAPEQVRVLPVGAD 288

Query: 564 AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRR 623
           +  YA E+   L +  L +E D R ET++ +I E     +P  ++ G +E + RSI IR 
Sbjct: 289 SHAYAAEVQEHLLAAGLRVEADARGETLSRRILEAHQDAVPFAVLVGPREQAGRSIQIRE 348

Query: 624 FGST 627
            G  
Sbjct: 349 RGGA 352


>gi|156098721|ref|XP_001615376.1| threonyl-tRNA synthetase [Plasmodium vivax SaI-1]
 gi|148804250|gb|EDL45649.1| threonyl-tRNA synthetase, putative [Plasmodium vivax]
          Length = 912

 Score =  339 bits (869), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 182/458 (39%), Positives = 275/458 (60%), Gaps = 21/458 (4%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSD 117
           IE +  E   +     HS AHI+  +++ ++    + IGP +++GFYYD +  +   +++
Sbjct: 254 IEFLNVEHEEAKKAFWHSSAHILGSSLEKLFGGY-LTIGPPLKEGFYYDIYLGDFSITNE 312

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES-IPAKENVTLYRQ 176
              ++E +  ++I  ++ F K   + E+  +LF+     +K+E++ + IP  +  ++Y+ 
Sbjct: 313 HYKKVEDEFSKLIKENAEFEKLICTKEEVMDLFQYN--PFKLELIRTKIPEGKKTSVYKC 370

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           G + DLC GPH++STG+ K F K++K + AYW G+ N   L R+YG  +  + EL  YL 
Sbjct: 371 GNFIDLCLGPHIKSTGKAKAF-KVLKNSAAYWLGNKNNESLQRVYGITFQKKTELNDYLN 429

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRRKIKDD-YEEI 294
           FLEE++KRDHR + +++  F   +D S G  FW   G KI+  LI ++RR+ +   Y+E+
Sbjct: 430 FLEEAKKRDHRNVGKKLHFFFFDKDTSPGSCFWLPHGAKIYNKLIDFVRREYRIRLYDEV 489

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
            TP V    LW+ SGH+ +Y+  MF          + + + +KPMNCPGH  +F     S
Sbjct: 490 ITPNVFSCDLWRTSGHYQNYKDCMFIFNV------EQKEWGMKPMNCPGHCVMFKQLNAS 543

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YR LP+RLA+FG ++RNE SGSL GL RVR F QDD+H+FCT EQ+  E L   + I  I
Sbjct: 544 YRSLPIRLADFGVLHRNEISGSLSGLTRVRRFQQDDSHIFCTFEQIKEEVLGTLHFIFFI 603

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           Y  FGF K  + LSTRP+K +G+ + WD AE  +K  L++        I   +  G+GAF
Sbjct: 604 YDLFGF-KYELFLSTRPKKFIGNISTWDFAEQALKDALNSAN------IPWKLNEGDGAF 656

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
           YGPK + +LKD+I R  QCGTIQ+DF LP RFN  Y N
Sbjct: 657 YGPKIDILLKDSINRTHQCGTIQLDFQLPCRFNLQYKN 694



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 43/119 (36%), Positives = 69/119 (57%)

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH 579
           PV+IHRA+ GS+ERF+ I+IE+  G LP W+SP QAIV  ++    +YA  +   L +H 
Sbjct: 766 PVIIHRAILGSVERFVAILIEHTAGKLPFWISPRQAIVLPVSDKFNDYAHYVHQTLNNHL 825

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
             +E D    T+N KIRE  + +   I++ G+KE +  ++ +R        +V  L+ +
Sbjct: 826 FDVEIDTSLNTLNKKIREAQLNQFNFILVVGEKELTTNTVTVRNRDDQNNHEVCSLEEL 884


>gi|328876049|gb|EGG24413.1| threonyl-tRNA synthetase [Dictyostelium fasciculatum]
          Length = 786

 Score =  338 bits (867), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 232/695 (33%), Positives = 358/695 (51%), Gaps = 71/695 (10%)

Query: 5   IKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEII 62
           I +  PDG  I+     +T   +A SIS+SLAK ++   ++G    L+  +  G S+E++
Sbjct: 102 IDIGLPDGRKIEGKKGESTPLIIASSISKSLAKSSLLAKLDGIPLSLTSVLEHGGSLELL 161

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQS------------------IWPEVQVAIG-PIIEDG 103
             E         +S + ++A A++                   I    Q  I   ++ DG
Sbjct: 162 DFESEEGRRCFWYSSSIVLAMAMRKHILSTYYNNNQQQQQHQVIITANQANITKSLLLDG 221

Query: 104 FYYDF---DKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVE 160
           F  D    D        ++  I+K M  I+  ++ F ++ +S +   +L       Y ++
Sbjct: 222 FQADIYLSDTSVTIKETDVKSIKKIMDTIVKENNIFKREKVSKQSLIDLLNKGNNKYGLD 281

Query: 161 ILESIPAKE----NVTLYRQG--EWFDLCRGPH--------VRSTGQVKKFFKLMKVAGA 206
            LE+I   E     V   + G  E+  +C G          + STG +K F  L   A  
Sbjct: 282 ELENIKENEINIIRVAYKKNGDEEFIVICNGQDNQLGLDCTLPSTGYIKAFDILRNSAVV 341

Query: 207 YWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVI 266
             R D +   L R+ G ++ +  +L  +    E + + DHR + RE +LF       G  
Sbjct: 342 GSRADMSH--LQRLAGISFPSNSQLDLFREQQELAAQLDHRNIGREQELFFFHPYSPGSC 399

Query: 267 FWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD 325
           F+   G K++  L+S++R + +   Y+E+ TP +  Q LW+ SGHW +Y+ NMF+ +C  
Sbjct: 400 FFLPHGAKVYNKLLSFLRGEYRRRGYQEVITPNIYSQKLWEVSGHWQNYKDNMFSFQC-- 457

Query: 326 DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRG 385
               D  T++LKPMNCPGH  ++ H ++SY+ELP+R A+FG ++RNE  GSL GL RVR 
Sbjct: 458 ----DHTTYSLKPMNCPGHCLMYAHRVRSYKELPMRYADFGVLHRNETHGSLTGLTRVRR 513

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP-EKRVGSDALWDDA 444
           F QDDAH+FC  +Q+  E     + +  +Y+ FGF    ++LSTRP E  +G    W+ A
Sbjct: 514 FQQDDAHIFCRTDQIEEEMRACLDFLQYVYRVFGF-TFSLELSTRPKEGYLGDLDTWNRA 572

Query: 445 ENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPS 504
           EN ++ VL+        R+N     G+GAFYGPK +  +KDA GR  QC TIQ+DF LP 
Sbjct: 573 ENALEQVLNE-SFRGHWRLNE----GDGAFYGPKIDIHIKDANGRSHQCATIQLDFQLPQ 627

Query: 505 RFNAFYVNSH------------SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
           RFN  +  S             S+   PVMIHRA+FGS ER + I+IE+ KG  P WLSP
Sbjct: 628 RFNLEFTTSGVAETDDPSALAPSKFERPVMIHRAIFGSTERMLAILIEHTKGKWPFWLSP 687

Query: 553 IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGD 611
            Q +VT+I  +  EYA++I   L      ++ D   ++TI  K+R+  I K   +I+ G+
Sbjct: 688 RQVLVTSIGDAHNEYAEKIRQDLHLAGYEVDIDTSAHKTIKKKLRDAIILKYNYVIVVGN 747

Query: 612 KEASERSIGIRRF-GSTTTQKV---SLLDAIPILT 642
           +E +  ++ +RR  G +T Q +   SLLD + I T
Sbjct: 748 EEVTNNTVSVRRRDGDSTPQSMSLSSLLDELQIKT 782


>gi|262341223|ref|YP_003284078.1| threonine--tRNA ligase [Blattabacterium sp. (Blattella germanica)
           str. Bge]
 gi|262272560|gb|ACY40468.1| threonine--tRNA ligase [Blattabacterium sp. (Blattella germanica)
           str. Bge]
          Length = 424

 Score =  338 bits (867), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 174/413 (42%), Positives = 253/413 (61%), Gaps = 15/413 (3%)

Query: 239 EESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINT 296
           E+    DHRK+ +++  F  ++  GSG+  W  +G  +   L  ++   + K  YE + T
Sbjct: 11  EDPNTIDHRKIGKKLKFFIFSDKVGSGLPLWLPRGTILRNNLEEFLTDIQKKSGYEMVVT 70

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +  + L+ QSGHW  Y  + F       T ++   F LKPMNCP H  V+     SYR
Sbjct: 71  PHIGHKKLYIQSGHWRKYGKDNFK---PIQTPREEEEFLLKPMNCPHHCEVYRSQEWSYR 127

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +LP R AEFG+VYR E SG LHGL RVR FTQDDAH+FCT +Q+  E  K+ NL+  +++
Sbjct: 128 DLPKRFAEFGTVYRYEQSGELHGLTRVRSFTQDDAHIFCTYDQVLEEFKKVINLVFYVFR 187

Query: 417 DFGFEKIMVKLSTRPEKRV----GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
             GF +  V++S R   ++    GS+  W+ AE   K +L+ +K   +++I   +  GE 
Sbjct: 188 CLGFSEYTVRISLRDTSKIDNYIGSEKNWEKAE---KAILNAVK---EEKIKASINYGEA 241

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           AFYGPK ++++KD++GR WQ GTIQVD+NLP RF+ +Y   ++EKC PVMIHRA FGS+E
Sbjct: 242 AFYGPKLDFLIKDSLGRSWQLGTIQVDYNLPERFDLYYKGKNNEKCRPVMIHRAPFGSLE 301

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
           R I I+IE+ KGNLPLWL+P Q ++  I+   + YA++I NL+ ++++ +  D RNE IN
Sbjct: 302 RMIAIVIEHTKGNLPLWLAPNQGVILPISDKYIVYAKKILNLMLNYNIRVFVDSRNEKIN 361

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
            KIR+   KKIP +II G+KE     I +RR G       S+   I  +  E+
Sbjct: 362 KKIRDSEEKKIPYMIILGEKEEKNEMISLRRHGLGHIGTFSISKGIETIFNET 414


>gi|89100585|ref|ZP_01173444.1| threonyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
 gi|89084689|gb|EAR63831.1| threonyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
          Length = 423

 Score =  338 bits (866), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 170/409 (41%), Positives = 256/409 (62%), Gaps = 14/409 (3%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+EKR+HRKL  E++LF   E+  G+ F+  KG ++   L +  ++K  K  Y E+ TP 
Sbjct: 25  EAEKRNHRKLGAELELFMFREEAPGMPFYLPKGMQVRNILENLWKQKHHKAGYHEVKTPI 84

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++ Q LW+QSGHWD Y  NM+  K       D   +A+KPM+CPG V +++   +SYREL
Sbjct: 85  MMKQALWEQSGHWDHYHENMYFSKV------DEHDYAIKPMSCPGAVLIYSSKRRSYREL 138

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R AE G V+R+E SGSL+GL+RVR FTQDDAH+F  ++Q+  E  K+  L+   Y  F
Sbjct: 139 PLRYAELGLVHRHELSGSLNGLLRVRSFTQDDAHLFVREDQIKEEAAKVLELVHEFYSLF 198

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE   V+LSTRPE+ +GS+  W+ AE  ++ VL   +      IN+G    +GAFYGPK
Sbjct: 199 GFE-YKVELSTRPEEFMGSEETWNLAEASLESVLQ--ERGIPFEINSG----DGAFYGPK 251

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++ + D++GR WQCGT+Q+DF +P +F   Y+   +    P+MIHRA++GSIERF+ I+
Sbjct: 252 IDFHITDSLGRSWQCGTVQLDFQMPEQFGCQYIGEDNLAHRPIMIHRAIYGSIERFLAIL 311

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE++ G+ P WLSP+QA+V  ++ + + YA E+   L+     I+ D R E +  KIRE 
Sbjct: 312 IEHYAGDFPFWLSPVQAMVLPVSEAHIGYALEVKARLEEAGCRIDIDSRAEKLGLKIREA 371

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLP 647
            ++K+P +II G+KE  +    +R+ G+     + L + +     E  P
Sbjct: 372 ELQKVPYMIIIGEKEIEQGGAALRKKGAGNLGVLHLQELLDRFRDEDRP 420


>gi|332797162|ref|YP_004458662.1| threonyl-tRNA synthetase [Acidianus hospitalis W1]
 gi|332694897|gb|AEE94364.1| threonyl-tRNA synthetase [Acidianus hospitalis W1]
          Length = 542

 Score =  337 bits (865), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 174/453 (38%), Positives = 268/453 (59%), Gaps = 19/453 (4%)

Query: 196 KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDL 255
           K+F+++ ++  +   D       RI G A+ T+++L  Y+ +LE++ + DHR L  +MDL
Sbjct: 89  KYFEILNISVHHPTPDKQ---YVRIRGVAFETEEQLKDYMNWLEKASETDHRILGEKMDL 145

Query: 256 FHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDS 313
           F   E+ G G++ +H KG  I   LI YM+       Y+E+ T  V    LW+ SGH++ 
Sbjct: 146 FSFPEEAGPGLVLYHPKGQIIRNELIDYMKEINASMGYQEVYTTHVYRTILWKISGHYEM 205

Query: 314 YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP 373
           Y+  M      D+ +       +KPMNCP H+ ++    +SY++LP+R +EFG+VYR E 
Sbjct: 206 YKDKMLIFTHDDEEL------GIKPMNCPAHILIYKSRTRSYKDLPIRFSEFGNVYRWEQ 259

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF--EKIMVKLSTRP 431
            G L+GL+RVRGFTQDD HVF  ++Q+ NE   + +  + +   FGF  + + + LSTRP
Sbjct: 260 KGELYGLLRVRGFTQDDGHVFLREDQLENEVKMLISKTLEVLAKFGFKGDDVRINLSTRP 319

Query: 432 EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDW 491
           ++ +G+D  W+ A N +   L ++    Q      V   EGAFYGPK ++ ++D++GR W
Sbjct: 320 DESIGTDEQWEKATNALVNALRSLNLKYQ------VKEKEGAFYGPKIDFDIRDSLGRWW 373

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLS 551
           Q  TIQVDFNLP RF   YV+    K  PVM+HRA++GSI+RF+ I++E+FKG LP WLS
Sbjct: 374 QLSTIQVDFNLPERFKLEYVDKDGSKKRPVMVHRAIYGSIDRFLAILLEHFKGKLPTWLS 433

Query: 552 PIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
           PIQ  +  I     EYA+++ + L S  +  E D   ET++ +I++     +P I+I G 
Sbjct: 434 PIQVRILPINPEVREYAEKVLSKLVSVKIRAEIDSEEETLSKRIKKAYDDGVPYILIIGK 493

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KEA   S+ IR  G+   + V L   +  ++KE
Sbjct: 494 KEAESNSVTIRARGNIEVKGVPLDKCVDAISKE 526


>gi|146304348|ref|YP_001191664.1| threonyl-tRNA synthetase [Metallosphaera sedula DSM 5348]
 gi|172046910|sp|A4YH38|SYT_METS5 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|145702598|gb|ABP95740.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Metallosphaera
           sedula DSM 5348]
          Length = 541

 Score =  337 bits (863), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 171/443 (38%), Positives = 266/443 (60%), Gaps = 19/443 (4%)

Query: 196 KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDL 255
           ++FK++ ++  +    S    L RI G A+ T++++  YL +LE++ + DHR +   MDL
Sbjct: 89  RYFKVLNISVHH---PSANVQLVRIRGIAFETKEQMDDYLQWLEKASETDHRIIGERMDL 145

Query: 256 FHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDS 313
           F   E+ G G++ +H KG  I   +I+YMR       Y+E+ T  V    LW+ SGH+D+
Sbjct: 146 FSFHEESGPGLVLFHPKGQLIRNEMINYMREINASMGYQEVYTSHVFRTVLWKISGHYDT 205

Query: 314 YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP 373
           YR  M   +  DD +       +KPMNCP H+ ++   ++SYR+LP+R +EFG+VYR E 
Sbjct: 206 YRDKMLIFQKDDDEL------GIKPMNCPAHILIYKSRVRSYRDLPIRFSEFGNVYRWEK 259

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF--EKIMVKLSTRP 431
            G L+GL+R RGFTQDD H+F  ++Q+ +E   +    + +   FGF  E + + LSTRP
Sbjct: 260 KGELYGLLRTRGFTQDDGHIFLREDQLKDEVKNLVRKTLDVLGKFGFKGEDVRINLSTRP 319

Query: 432 EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDW 491
           ++ +GSD  W+ A    K +LD +K  +   +   V   EGAFYGPK ++ ++D++ R W
Sbjct: 320 DESIGSDEQWEKA---TKALLDVLKELNVPYV---VKEKEGAFYGPKIDFDIRDSLNRWW 373

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLS 551
           Q  TIQVDFNLP RF   YV+    K  PVM+HRA++GS++R I I++E+F+G LP WLS
Sbjct: 374 QLSTIQVDFNLPERFKLEYVDEDGSKKRPVMVHRAIYGSLDRMIAILLEHFRGKLPTWLS 433

Query: 552 PIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
           P+Q  V  I+   ++YA+ + ++L    +  E D   ET++ +I+      +P ++I G 
Sbjct: 434 PVQVRVLPISEDNLDYAKRVMDVLVQRGIRTEIDPSGETLSKRIKRGYDDGVPYLVIVGR 493

Query: 612 KEASERSIGIRRFGSTTTQKVSL 634
           KEASE  + IR  G+   + V L
Sbjct: 494 KEASEEKVTIRARGNVEIKGVPL 516


>gi|154344603|ref|XP_001568243.1| threonyl-tRNA synthetase [Leishmania braziliensis MHOM/BR/75/M2904]
 gi|134065580|emb|CAM43350.1| putative threonyl-tRNA synthetase [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 789

 Score =  336 bits (861), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 197/562 (35%), Positives = 300/562 (53%), Gaps = 63/562 (11%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGS-DVAESISRSLAKKAVAVAINGKVCDLSDPVREGS- 58
           M + IK+T PDG + +     T   D+A+ +S SL  K +   +N  + DL+ P+ EG  
Sbjct: 44  MKAPIKVTLPDGKVMDAESWVTRPLDIAKCLSNSLPDKVIVARVNEALWDLTRPL-EGDC 102

Query: 59  -IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFSS 116
            +E++  +D  +  V  HS +H++  A++ I+ + ++++GP + E GF+Y+    +P S 
Sbjct: 103 HLELLDWDDEDAHEVFWHSSSHVLGYALERIF-DTKLSVGPALKEGGFFYEGLTNRPVSE 161

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES-IPAKENVTLYR 175
            +   IE  MQE++ +  P+ +  +S E A  LF   +  +K +IL S +P     T+YR
Sbjct: 162 SDYKAIESAMQELVKQKMPYQRLEVSKEDALRLFGYTE--FKSKILASKVPDGGTCTVYR 219

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
            G   D CRGPH+  TG+VK F  + K + +Y+ G +   +L R+YG ++     LT++ 
Sbjct: 220 CGMLIDPCRGPHLPDTGRVKAF-AVTKNSSSYFEGKAENEVLQRVYGISFPKNIMLTEWK 278

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEI 294
              EE+ KRDHR + R+ +LF   E   G  FW   G +I+ TL+ ++R+K +   ++E+
Sbjct: 279 MIQEEAAKRDHRVIGRQQNLFTFNEVSPGSAFWLPHGARIYNTLVEFLRKKYRRCGFQEV 338

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
            +P +    LW  SGHW+ Y  NMF  KC  +       F LKPMNCPGH  +F     S
Sbjct: 339 ISPNMYSSKLWMVSGHWEKYADNMFCTKCEKED------FGLKPMNCPGHCIMFASQPHS 392

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YRELP+R A+FG ++RNE SG+L GL RVR F QDDAH+FC  +Q+ +E       +  +
Sbjct: 393 YRELPIRYADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCRMDQITDEMEGQMQFLSDV 452

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTI------------------- 455
           Y   GF K     STRP  ++GSDALWD +E+ ++  L+                     
Sbjct: 453 YGVLGF-KFYFYHSTRPANKLGSDALWDQSESYLRAALNRFCGIPEELPDPLRPDQRFCY 511

Query: 456 ----------------------KNSSQDRINTG----VLLGEGAFYGPKFEYILKDAIGR 489
                                  N+ +   N G       G+GAFYGPK + +++DA+ R
Sbjct: 512 DGKPESVKKMKILMKKVEHSEDPNAWKGPTNGGEGWIENAGDGAFYGPKIDIVVEDALRR 571

Query: 490 DWQCGTIQVDFNLPSRFNAFYV 511
             QC TIQ+DFNLPSRF   Y 
Sbjct: 572 RHQCATIQLDFNLPSRFGLKYT 593



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 68/129 (52%)

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANL 574
           + +  PVMIHRA+ GS+ER I I+ E+F G+ P WLSP Q +V  +++S   YAQ++ + 
Sbjct: 652 ANQARPVMIHRAILGSLERSIAILCEHFGGDWPFWLSPRQVMVVPVSASNYGYAQKVRDT 711

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           +       + D    T++ KIR     +   I++ G +E    S+ IR  G       SL
Sbjct: 712 MHDAGFYADVDNGAATLDKKIRNSEKARYNFILVVGQQEQDATSVNIRARGERRLGNKSL 771

Query: 635 LDAIPILTK 643
            + +   T+
Sbjct: 772 AEVVQWFTE 780


>gi|13435498|gb|AAH04621.1| Tars protein [Mus musculus]
          Length = 457

 Score =  336 bits (861), Expect = 9e-90,   Method: Compositional matrix adjust.
 Identities = 179/438 (40%), Positives = 261/438 (59%), Gaps = 19/438 (4%)

Query: 189 RSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRK 248
           R TG++K   K+ K +  YW G ++   L RIYG ++   + L ++  F EE++ RDHRK
Sbjct: 1   RHTGKIKTL-KIHKNSSTYWEGKADMETLQRIYGISFPDPKLLKEWEKFQEEAKNRDHRK 59

Query: 249 LAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQ 307
           + R+ +L+   E   G  F+  KG  I+ TL+ ++R +  K  ++E+ TP + +  LW  
Sbjct: 60  IGRDQELYFFHELSPGSCFFLPKGAYIYNTLMEFIRSEYRKRGFQEVVTPNIFNSRLWMT 119

Query: 308 SGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGS 367
           SGHW  Y  NMF+ +   +       FALKPMNCPGH  +F+H  +S+RELP+RLA+FG 
Sbjct: 120 SGHWQHYSENMFSFEVEKEQ------FALKPMNCPGHCLMFDHRPRSWRELPLRLADFGV 173

Query: 368 VYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKL 427
           ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E     + + ++Y  FGF    + L
Sbjct: 174 LHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSVFGF-SFKLNL 232

Query: 428 STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAI 487
           STRPEK +G   +W+ AE  ++  L+      +  +N     G+GAFYGPK +  +KDAI
Sbjct: 233 STRPEKFLGDIEIWNQAEKQLENSLNEFGEKWE--LNP----GDGAFYGPKIDIQIKDAI 286

Query: 488 GRDWQCGTIQVDFNLPSRFNAFYVNSH--SEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           GR  QC TIQ+DF LP RFN  YV SH   +K  PV++HRA+ GS+ER I I+ EN+ G 
Sbjct: 287 GRYHQCATIQLDFQLPIRFNLTYV-SHDGDDKKRPVIVHRAILGSVERMIAILTENYGGK 345

Query: 546 LPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIREHSIKKIP 604
            P WLSP Q +V  +  +  EYAQ++           +TD     T+N KIR   + +  
Sbjct: 346 WPFWLSPRQVMVVPVGPTCDEYAQKVRQQFHDAKFMADTDLDPGCTLNKKIRNAQLAQYN 405

Query: 605 IIIICGDKEASERSIGIR 622
            I++ G+KE +  ++ IR
Sbjct: 406 FILVVGEKEKASGTVNIR 423


>gi|322796311|gb|EFZ18882.1| hypothetical protein SINV_16250 [Solenopsis invicta]
          Length = 807

 Score =  335 bits (860), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 211/642 (32%), Positives = 323/642 (50%), Gaps = 86/642 (13%)

Query: 2   PSDIKLTFPDGS-IKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           P++I +T PDG  I       T  DVA+ IS+ LA   V   +N ++ DL  P+  +  +
Sbjct: 230 PANITVTLPDGKKISGKSWRTTPYDVAKGISQGLADNTVIAKVNNELWDLDRPLESDCKL 289

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDE 118
           +++  ++P    V  HS AH++ EA++ ++    +  GP IE+GFYYD +  +Q  S+ +
Sbjct: 290 QLLKFDEPEGQQVFWHSSAHVLGEAMERVYGGC-LCYGPPIENGFYYDMYLGDQGISNAD 348

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
              +E   + I+     F +  ++ E   E+F  K   +KV I+         T YR   
Sbjct: 349 FPYLESLYKNIVKEKQQFERLEMTKEDLLEMF--KYNEFKVRIINERIHTPTTTAYR--- 403

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
               C     R  G+                                       Q LYF 
Sbjct: 404 ----CAKRDHRKIGK--------------------------------------EQELYF- 420

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
                            FH  E   G  F+  +G  I+ TL+ ++R +  K  ++E+ TP
Sbjct: 421 -----------------FH--ELSPGSCFFQPRGAYIYNTLMEFIRSEYRKRGFQEVITP 461

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  LWQ SGHW  Y  NMF+     +      TFALKPMNCPGH  +F+   +S+RE
Sbjct: 462 NIYNSKLWQTSGHWQHYAENMFSFDVEKE------TFALKPMNCPGHCLIFDVRCRSWRE 515

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+RLA+FG ++RNE SG+L GL RVR F QDDAH+FC+ EQ+ +E     + +  +Y  
Sbjct: 516 LPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCSIEQIKDEISGALDFLWHVYSV 575

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
            GF    + LSTRPEK +G   +W++AE  ++  L+             +   +GAFYGP
Sbjct: 576 LGF-TFNLCLSTRPEKFMGDIEVWNEAEKALEESLNAFGQP------WSLNPEDGAFYGP 628

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  + DA+ R  Q  TIQ+DF LP RFN  YVN   EK  PV+IHRA+ GS+ER I I
Sbjct: 629 KIDITIMDALKRAHQTATIQLDFQLPIRFNLSYVNEAGEKTRPVIIHRAILGSVERMIAI 688

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF-RNETINYKIR 596
           + E++ G  P WLSP QA+V  + S   +YA E+   L    + +E D   ++T+N KIR
Sbjct: 689 VTESYGGKWPYWLSPRQAMVVPVASQFDDYAYEVKQKLWDAGVMVEVDTDSSDTLNKKIR 748

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
              + +   I++ G+KE +  ++ +R   +T   ++++ + I
Sbjct: 749 NAQLAQFNFILVVGEKERNAGTVNVRTRDNTVHGEIAVDELI 790


>gi|115359784|ref|YP_776922.1| tRNA synthetase, class II (G, H, P and S) [Burkholderia ambifaria
           AMMD]
 gi|115285072|gb|ABI90588.1| tRNA synthetase, class II (G, H, P and S) [Burkholderia ambifaria
           AMMD]
          Length = 402

 Score =  335 bits (859), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 168/409 (41%), Positives = 242/409 (59%), Gaps = 14/409 (3%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQH 303
           DHR L  ++DLFH  ++  G IFWH +G  +++ +  Y+R +++   + E+ TPQ++ + 
Sbjct: 5   DHRVLGNKLDLFHQQDESPGAIFWHPRGMVLYRVVEEYIRVRMRQAAFAEVRTPQIVSRD 64

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+QSGHW+ +  NMF+++       D   + LKPM+CP HV +F  G +SYR+LP+R +
Sbjct: 65  LWEQSGHWEKFGRNMFSLE------SDNNPYCLKPMSCPCHVQIFKKGSRSYRDLPIRYS 118

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFG+V+R EPSG+LHGLMR R FTQDDAHV C  +Q+  E  +   L+ +IY DFGF + 
Sbjct: 119 EFGAVHRAEPSGALHGLMRARAFTQDDAHVLCMPDQVEIEVARFCVLLKTIYADFGFGEF 178

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            V LSTRP  R G DA+WD +E ++         +    ++  +  GEGAFYGPK E+ L
Sbjct: 179 DVALSTRPAVRAGDDAVWDRSEAMLA------SAARAAGLDFAIQAGEGAFYGPKLEFHL 232

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D  GR WQCGTIQ+DF LP R  A YV     K  PVM+H AV GS+ERFIGI++E+++
Sbjct: 233 FDRQGRKWQCGTIQLDFVLPERLGAAYVAEDGAKATPVMLHHAVLGSLERFIGILLEHYE 292

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G LP WL+P Q +V  I      +A   A   +     +  DFR E +  KI +      
Sbjct: 293 GWLPTWLAPDQIVVANIGKDDRAFADNTAFAFEDIGCRVLRDFRAERLPRKIFDARELAA 352

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           PI+ I G KEA    + + R        +++ DA+  L + +  P   +
Sbjct: 353 PIVAIAGRKEALAGEVSL-RLRDGEQHVLTINDALAYLKQHACVPSATR 400


>gi|254692871|ref|NP_001157090.1| threonyl-tRNA synthetase, mitochondrial isoform 3 [Mus musculus]
          Length = 642

 Score =  335 bits (858), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 177/485 (36%), Positives = 269/485 (55%), Gaps = 33/485 (6%)

Query: 157 YKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPM 216
           +K+ ++E        T+Y  G   DLCRGPH+R TGQ+    KL+  + A WR       
Sbjct: 138 FKLHLIEEKVTGPTATVYGCGMSVDLCRGPHLRHTGQIGAL-KLLTNSSALWRSLGAPET 196

Query: 217 LSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIF 276
           L R+ G ++   + L  +    E +E RDHR++ +E +LF   E   G  F+  +G +++
Sbjct: 197 LQRVSGISFPKVELLRNWEARREAAELRDHRRIGKEQELFFFHELSPGSCFFLPRGTRVY 256

Query: 277 QTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK------------- 322
             L++++R +  +  + E+ TP +    LW+QSGHW+ YRA+MF++K             
Sbjct: 257 NALVAFIRAEYARRGFSEVKTPTLFSTKLWEQSGHWEHYRADMFSLKPPGTDGVDNSQSG 316

Query: 323 ----CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLH 378
               C  DT+      ALKPMNCP H  +F H  +S+RELPVRLA+FG+++R E SGSL 
Sbjct: 317 HPARCPKDTL------ALKPMNCPAHCLMFAHRPRSWRELPVRLADFGALHRAEASGSLG 370

Query: 379 GLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD 438
           GL R+  F QDDAH+FC   Q+  E     + +  +Y   GF    + LSTRP   +G  
Sbjct: 371 GLTRLWRFQQDDAHIFCAPHQLEAEIQGCLDFLRCVYSVLGF-SFHLALSTRPPGFLGEP 429

Query: 439 ALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
            LWD AE +++  L+         +N G    +GAFYGPK +  L DA+GR  QCGTIQ+
Sbjct: 430 RLWDQAEQVLQQALEKFGEPWD--LNPG----DGAFYGPKIDVHLHDALGRPHQCGTIQL 483

Query: 499 DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVT 558
           DF LP RF+  Y         PV+IHRAV GS+ER +G++ E+  G  PLWLSP+Q +V 
Sbjct: 484 DFQLPLRFDLQYKGPAGTPECPVLIHRAVLGSVERLLGVLAESCGGKWPLWLSPLQVVVI 543

Query: 559 TITSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASER 617
            + +   EYA+++   L++  L  + D  +  T++ ++R   +       + G +E S+R
Sbjct: 544 PVRTEQEEYARQVQQCLQAAGLVSDLDADSGLTLSRRVRRAQLAHYNFQFVVGQREQSQR 603

Query: 618 SIGIR 622
           ++ +R
Sbjct: 604 TVNVR 608


>gi|149001905|ref|ZP_01826859.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
 gi|147759714|gb|EDK66704.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
          Length = 435

 Score =  334 bits (857), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 169/426 (39%), Positives = 254/426 (59%), Gaps = 17/426 (3%)

Query: 216 MLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWK 274
           M+ RIYGTAW  +++L  YL   EE+++RDHRKL +E+DLF I+++ G G+ FW   G  
Sbjct: 1   MMQRIYGTAWFEKKDLKNYLQMREEAKERDHRKLGKELDLFMISQEVGQGLPFWLPNGAT 60

Query: 275 IFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           I + L  Y+  +++   Y+ + TP +    L++ SGHWD Y+ +MF        + D   
Sbjct: 61  IRRELERYIVNKELASGYQHVYTPPLASVELYKTSGHWDHYQEDMFPTM----DMGDGEE 116

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
           F L+PMNCP H+ VF H + SYRELP+R+AE G ++R E SG+L GL RVR  + +D H+
Sbjct: 117 FVLRPMNCPHHIQVFKHHVHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHL 176

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR----PEKRVGSDALWDDAENIMK 449
           F T EQ+  E  +   LII +Y+DF       +LS R      K   +D +W++A+ +++
Sbjct: 177 FVTPEQIQEEFQRALQLIIDVYEDFNLTDYRFRLSLRDPQDTHKYFDNDEMWENAQTMLR 236

Query: 450 GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAF 509
             LD +       ++     GE AFYGPK +  +K A+G++    TIQ+DF LP RF+  
Sbjct: 237 AALDEMG------VDYFEAEGEAAFYGPKLDIQIKTALGKEETLSTIQLDFLLPERFDLK 290

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYA 568
           Y+ +  E   PVMIHR V  ++ERF  I+IEN+KG  P WL+P Q  +  +++   V+YA
Sbjct: 291 YIGADGEDHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYA 350

Query: 569 QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
            E+A  L+   +  + D RNE + +KIR     KIP  +I GDKE  + ++ +RR+G   
Sbjct: 351 WEVAKKLRDRGVRADVDERNEKMQFKIRASQTSKIPYQLIVGDKEMEDETVNVRRYGQKE 410

Query: 629 TQKVSL 634
           TQ VS+
Sbjct: 411 TQTVSV 416


>gi|152996743|ref|YP_001341578.1| tRNA synthetase class II (G H P and S) [Marinomonas sp. MWYL1]
 gi|150837667|gb|ABR71643.1| tRNA synthetase class II (G H P and S) [Marinomonas sp. MWYL1]
          Length = 395

 Score =  333 bits (855), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 160/381 (41%), Positives = 243/381 (63%), Gaps = 11/381 (2%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           + HR+LA ++DLFH  +   G++FWH  GW +FQ +  +MRR  +   ++E+ TPQ++ +
Sbjct: 2   KTHRELAEQLDLFHSEQQAPGMLFWHPNGWHLFQNIQEHMRRCYRQYGFKEVRTPQLMKK 61

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW  SGH D Y  +MF      +   D + +ALKPM+CP H+ ++  G+ SYR+LP++L
Sbjct: 62  ELWHISGHMDMYAQDMF---FGGEQNGD-QEYALKPMSCPAHILMYKRGVHSYRDLPLKL 117

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG V+RNE SGSL+G +R+R FTQDDAHVFC   Q+  E  +       IY D+G++ 
Sbjct: 118 FEFGLVHRNESSGSLNGCLRLRQFTQDDAHVFCAWSQVKQEVGQFLQRAKQIYNDYGYQA 177

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + VK+ST+PEK +G DA W  AE+I+K      +    + +   + +GEGAFYGPK E  
Sbjct: 178 LEVKISTQPEKALGDDASWRRAEDILK------EACQAENVPFDIQVGEGAFYGPKIELA 231

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+DA+GR WQCGTIQ+DFNLP RF   + N   +   P+++H+AV+GSIER+IGI++E  
Sbjct: 232 LQDAVGRIWQCGTIQLDFNLPDRFELEFDNEQGKAEQPIILHQAVYGSIERWIGILLEVS 291

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
           +G LP W+ P    + ++  S ++YA ++   L+   +++  +F + ++  KI+     K
Sbjct: 292 QGVLPEWIHPQPVALVSVNDSVLDYANQLRAELEQQGINVSCEFGDHSVGRKIKRSFELK 351

Query: 603 IPIIIICGDKEASERSIGIRR 623
           IP III G++EA    + IRR
Sbjct: 352 IPNIIIIGEQEAQAGKLTIRR 372


>gi|281211698|gb|EFA85860.1| threonyl-tRNA synthetase [Polysphondylium pallidum PN500]
          Length = 730

 Score =  332 bits (852), Expect = 9e-89,   Method: Compositional matrix adjust.
 Identities = 208/656 (31%), Positives = 344/656 (52%), Gaps = 51/656 (7%)

Query: 5   IKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV--REGSIEI 61
           I +  PDG  I      +T   VA +IS+SLA + +   +NGK+  + + +  RE ++E+
Sbjct: 85  IDIILPDGRKINGQKGVSTPFSVARTISKSLANRVLLSRVNGKLHGIGEALNERESNVEL 144

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQS-------IWPEVQVAIGPIIEDGFYYD--FDKEQ 112
           +  E+  +      S + + A A          I     +     ++DG+  D    + +
Sbjct: 145 LDFENDDARRCFWLSSSIVTAAAAMQHFGSNSFITHHNYLLTNNALQDGYQVDMYLPENR 204

Query: 113 PFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFE----SKKEAYKVEILESIPAK 168
             +  ++  I+K M  +I  D PF ++ ++ +++ E+F+    +       +I+E +   
Sbjct: 205 TITESDIKSIQKIMTTLIQSDKPFTRKSITKKQSLEIFKVYIINNNFKNDGDIVEIVEFN 264

Query: 169 ENVTLYRQGEWFDLCRGPHVRSTGQVK--KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWN 226
             +TL        + + P + S+G++K  +  K   + G+     +  P L R+ G ++ 
Sbjct: 265 GFITL--------VDKIPTLMSSGKLKCIELTKNSSIVGSL----AALPTLQRLSGISFP 312

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
            +++L  +     ++ + DHR + R+ +LF       G  F+   G +I+  L S++R +
Sbjct: 313 EKEQLAVWKDLQHQAAQLDHRNIGRDQELFFFHPYSPGSCFFLPHGTRIYNKLHSFLRSE 372

Query: 287 I-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
             K  +EE+ TP +  Q LW+ SGHW +Y+ NMF  +C      D  +++LKPMNCPGH 
Sbjct: 373 YRKRGFEEVITPNIYSQKLWETSGHWQNYKDNMFGFQC------DHTSYSLKPMNCPGHC 426

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +F H   SY++LP+R+A+FG ++RNE  GSL GL RVR F QDDAH+FC  +Q+  E  
Sbjct: 427 LMFAHKSHSYKDLPMRIADFGVLHRNETHGSLTGLTRVRRFQQDDAHIFCRADQIREEIQ 486

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
           K    +  +Y  FGF    ++LSTRP   +G   +W+ AE  ++ VL+      + R+N 
Sbjct: 487 KCLEFMQFVYDKFGFS-FSLELSTRPTPFLGDVDMWNRAEASLESVLNEF--GREWRVNP 543

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
           G    +GAFYGPK +  +KDA G+  QC TIQ+DF LP RF   Y  + S    PVMIHR
Sbjct: 544 G----DGAFYGPKIDIHIKDANGKSHQCATIQLDFQLPIRFGLEYTAADSRAERPVMIHR 599

Query: 526 AVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA-------VEYAQEIANLLKSH 578
           A+FGS ER + I+IE+ KG  PLWLSP Q  +  ++ ++        +Y   +   L   
Sbjct: 600 AIFGSTERMMAILIEHTKGKWPLWLSPRQIFIAPVSVNSDGSGGPYNDYLNAVKQRLFDA 659

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
              I++D  ++TIN K+RE    +   +++ G +E    +I IRR  ST    ++L
Sbjct: 660 GYHIDSDLSDKTINKKLREAITLRYNYLVVIGKEEQDNNTITIRRRDSTDQITLTL 715


>gi|83645563|ref|YP_433998.1| threonyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
 gi|83633606|gb|ABC29573.1| Threonyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
          Length = 415

 Score =  330 bits (847), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 159/412 (38%), Positives = 254/412 (61%), Gaps = 19/412 (4%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQ 302
           ++HR +A E+DLFH    G G+ FWH +GW++F+T+ +++R   + + ++E+ TPQ L +
Sbjct: 2   KNHRDIAEELDLFHSEAQGPGMAFWHPRGWRMFRTVKNHIRAAYEAESFQEVATPQFLKR 61

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW+ Y  +MF      +  +    +ALKPM+CP H+ ++  G++SY+ LP+RL
Sbjct: 62  ELWETSGHWEKYADDMFVGAGFGEEPE----YALKPMSCPAHILLYKRGVRSYKSLPLRL 117

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG V+RNE SG+L+GLMR+R FTQDDAHVFC  +Q+  E          +Y D+G+ +
Sbjct: 118 FEFGLVHRNERSGALNGLMRLRQFTQDDAHVFCRWDQVSQEIQAFLRRAERVYADYGYGR 177

Query: 423 IMVKLSTRPEK-RVGSDALWDDAENIMKGVLDTIKNS--SQDRINTGVLLGEGAFYGPKF 479
             V +STRP++   G+   W+ AE ++             Q+        GEGAFYGPK 
Sbjct: 178 PQVFISTRPQRDYFGAPEDWERAELMLAEACAAASAEFVRQE--------GEGAFYGPKI 229

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           E  LKD  GR WQ GTIQ+DFN+P RF+  Y+++  E+  PV++H+AV+GSIER+IG+++
Sbjct: 230 ELALKDGQGRQWQMGTIQLDFNMPERFDLHYIDAAGERRRPVILHQAVYGSIERWIGVLL 289

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E ++  LP W+ P   ++ ++   AV Y + +  LL+ H + +E D  N+++  K++   
Sbjct: 290 ETYQAALPAWVHPQPVVLASVGQDAVAYCESVGELLRRHGVPVEMDLANDSLAKKMKVLR 349

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLP-PDC 650
             K P+++I G +E +  SI +RR G    Q ++  D +  + +E+L   DC
Sbjct: 350 RYKTPLVLIAGAQEMANDSIVVRRRGG--EQALASRDELVAIVREALSVADC 399


>gi|298709340|emb|CBJ31276.1| ATP binding / tRNA ligase/ threonine-tRNA ligase [Ectocarpus
           siliculosus]
          Length = 470

 Score =  329 bits (844), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 170/375 (45%), Positives = 245/375 (65%), Gaps = 20/375 (5%)

Query: 53  PVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ 112
           P  EGS E++          IRH+ AH+MA AVQ ++P  QV IGP I++GFYYDF  E+
Sbjct: 97  PTNEGSPELLK---------IRHTSAHVMAMAVQRLFPGTQVTIGPWIDNGFYYDFYNEE 147

Query: 113 PFSSD-ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENV 171
              +D +L +I+K+M +II +  P +++ ++ E+AR   E+  E +K+EIL+SI   E +
Sbjct: 148 TTMTDSDLKKIKKEMDKIIRQKLPLVREEVTREEARSRIEALGEPFKLEILDSIKT-EPI 206

Query: 172 TLYRQG-EWFDLCRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQ 229
           TLY  G +W+DLC GPHV +TG + +K  +L  +AGAYWRGD NRP L RIYGTAW    
Sbjct: 207 TLYHVGDQWWDLCAGPHVETTGDLPQKGIELQTLAGAYWRGDENRPALQRIYGTAWENPA 266

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKI 287
           +L ++   + E+++RDHR L +++DLF + ED G G++FWH KG  I   + ++ + + +
Sbjct: 267 QLKEHKRRMVEAKRRDHRVLGKKLDLFSLQEDAGGGLVFWHPKGSTIRMLIENFWKAQHL 326

Query: 288 KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
              YE + TP V +  LW+ SGH+D Y+  MF     D    +   + +KPMNCP H  V
Sbjct: 327 DKGYELLYTPHVANLDLWKTSGHFDFYKDGMF-----DQMDVEGDQYQIKPMNCPFHCLV 381

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
           +   L+SYRELP+R AE G+VYR E SG+LHGLMRVRGFTQDDAH+FC  EQ+ +E + +
Sbjct: 382 YKDDLRSYRELPIRWAEMGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQLEDEIISV 441

Query: 408 HNLIISIYKDFGFEK 422
            +L  +I   FGF++
Sbjct: 442 LDLTEAILSRFGFDR 456


>gi|326674558|ref|XP_002664809.2| PREDICTED: threonyl-tRNA synthetase, cytoplasmic-like, partial
           [Danio rerio]
          Length = 441

 Score =  329 bits (843), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 174/438 (39%), Positives = 257/438 (58%), Gaps = 19/438 (4%)

Query: 210 GDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWH 269
           G S    + R+ G ++ +++E  Q+    EE+ +RDHR++ +  +LF   +   G  F+ 
Sbjct: 8   GSSEASGILRMIGVSFPSEREREQWEKEQEEARRRDHRRIGKAQELFFFHDVSPGSCFFM 67

Query: 270 RKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTI 328
            KG  I+ TL  +++ + +   + E+ TP +    LW++SGHW  Y  NMF+V       
Sbjct: 68  PKGAHIYNTLTDFIKSEYRRRGFSEVVTPTLFSTALWERSGHWQHYSENMFSVS------ 121

Query: 329 KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQ 388
            +  TFALKPMNCP H  +F   L+S+RE+P+R A+FG+++RNE SG+L GL RVR F Q
Sbjct: 122 SETHTFALKPMNCPAHCVMFEQRLRSWREMPIRWADFGALHRNEASGTLGGLTRVRRFCQ 181

Query: 389 DDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIM 448
           DDAH+FCT EQ+  E     + + S+Y+ FGF      LSTRP   +G  ALWD AE  +
Sbjct: 182 DDAHIFCTPEQLEQEITACLDFVRSVYRVFGF-SFHCLLSTRPASSMGDSALWDCAEQQL 240

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
           +  L   +   +  +N G    +GAFYGPK + +++DA+GR  QC TIQ+DF LP RFN 
Sbjct: 241 ESSLKLFQERWE--LNPG----DGAFYGPKIDILIRDALGRQHQCATIQLDFQLPIRFNL 294

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYA 568
            YV +  +   P+MIHRAV GS+ER I I+ ENF G  P WLSP Q +V  +  S+  YA
Sbjct: 295 QYVGADGQMKRPIMIHRAVLGSLERMIAILAENFGGKWPFWLSPAQVMVVPVGGSSEAYA 354

Query: 569 QEIANLLKSHHL--SIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR-RFG 625
           Q++ + L+       I+ D  N T+N KIR   + +   I + G+KE+   ++ +R R G
Sbjct: 355 QQVVSRLREAGFMADIDDDHGN-TLNKKIRSAQLAQYNYIFVVGEKESECGTVSVRTRAG 413

Query: 626 STTTQKVSLLDAIPILTK 643
               QK +L D +  LT+
Sbjct: 414 QQIGQK-TLEDVMKTLTQ 430


>gi|297844762|ref|XP_002890262.1| hypothetical protein ARALYDRAFT_889225 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297336104|gb|EFH66521.1| hypothetical protein ARALYDRAFT_889225 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 620

 Score =  329 bits (843), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 195/607 (32%), Positives = 317/607 (52%), Gaps = 63/607 (10%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPI--IEDGFYYD--FDKEQP 113
           S+EI   +  +      HS AHI+ +A++  +   ++ IGP   I++GFYYD  +  +  
Sbjct: 10  SVEIFGFDSVQGRDTFWHSSAHILGQALEQEYG-CKLCIGPCKTIDEGFYYDAFYHGDLG 68

Query: 114 FSSDELAQIEKK----------MQEIIA---------------------RDSPFLKQYLS 142
            + D    IE+           +  +I                         PF +  ++
Sbjct: 69  LNDDHFPHIEEGAAKSALVWLLLVTVICLLNVVCHPIFSVPILFISTSQEGQPFERILVT 128

Query: 143 HEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLM 201
            ++A E+F      +KVEI+ +++   E  T+YR G   DLCRGPH+ +T  VK F K +
Sbjct: 129 KDQALEMFSDN--LFKVEIINDNLAEDETTTVYRCGPLVDLCRGPHIPNTSFVKAF-KCL 185

Query: 202 KVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED 261
           K + A+W+GD +R  L R+YG ++   ++L  YL  +EE++  DHR   ++ +LF     
Sbjct: 186 KASSAHWKGDKDRESLQRVYGISYPDDKQLKDYLKSIEEAKIYDHRLSGQQQELFFSHPL 245

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
             G   +   G +++  L+ + +++  K  Y E+ TP +     W+ S H + Y+ NMF 
Sbjct: 246 SPGNCIYLPHGTRVYNKLMEFFKKEYWKMGYTEVITPVIYTMDFWETSRHAEYYQKNMFK 305

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +      +  +  + +K MNC GH  +F H +    +LP++LA+FG +Y+NE S  L GL
Sbjct: 306 LDFQTPGLTVIHNYGIKHMNCQGHCLMFRHSV----QLPIKLADFGPLYQNEASEDLSGL 361

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            RVR F QDDAH+FC++ Q+  E   I + +   Y  FGF    +KLSTRP+K +G    
Sbjct: 362 TRVRQFQQDDAHIFCSETQVKEEVRGILDFVDYAYTKFGF-TYELKLSTRPKKYLGDLEK 420

Query: 441 WDDAENIMKGVLDT-----IKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGT 495
           WD AE  ++  L+      +KN            G+G FYGPK +  + DA+ R +QC T
Sbjct: 421 WDKAEKDLEEALNDFGKTWVKNK-----------GDGEFYGPKIDITVYDAMKRKFQCAT 469

Query: 496 IQVDFNLPSRFNAFY-VNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQ 554
           IQ+DF+LP RF   Y     +E    V+IHRAV GS+ER   I++E +KG LP WLSP Q
Sbjct: 470 IQLDFHLPDRFKLEYSAEDETEIESSVLIHRAVLGSVERLFAILLEQYKGKLPFWLSPRQ 529

Query: 555 AIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
           AIV +++  +  YA ++ + +      ++ D  + T++ K++E  + +   I+  GD+EA
Sbjct: 530 AIVCSVSEDSRSYANKVRDQIHEAGYYVDVDTTDRTVSEKVQEAQVAQYNYILAVGDEEA 589

Query: 615 SERSIGI 621
               + +
Sbjct: 590 RTGQVTV 596


>gi|114559279|ref|XP_001168807.1| PREDICTED: threonyl-tRNA synthetase-like 1 isoform 4 [Pan
           troglodytes]
          Length = 657

 Score =  328 bits (842), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 200/585 (34%), Positives = 306/585 (52%), Gaps = 41/585 (7%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSD 117
           +I+I  P   +  AV  ++  + +A  + S   +  VA     E      +D E+P  +D
Sbjct: 60  TIKISLPGGQKIDAVAWNTTPYQLARQISSTLADTAVAAQVNGEP-----YDLERPLETD 114

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY--- 174
              +        +  DSP  K    H     +  +  E +   +L   P+ E    +   
Sbjct: 115 SDLRF-------LTFDSPEGKAVFWHSST-HVLGAAAEQFLGAVLCRGPSTEYGFYHDFF 166

Query: 175 ----RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQE 230
               R G   DLC+GPH+R TGQ+     L   +  +    +    L R+ G ++ T + 
Sbjct: 167 LGKERCGTLVDLCQGPHLRHTGQIGGLKLLSNSSSLWRSSGAPE-TLQRVSGISFPTTEL 225

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
           L  +  + EE+E RDHR++ +E +LF   E   G  F+  +G +++  L++++R +    
Sbjct: 226 LRAWEAWREEAELRDHRRIGKEQELFFFHELSPGSCFFLPRGTRVYNALVAFIRAEYAHR 285

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKC----------ADDTIKDLR-TFALKP 338
            + E+ TP +    LW+QSGHW+ Y+ +MFAV+           +DD+ + +  T ALKP
Sbjct: 286 GFSEVKTPTLFSTKLWEQSGHWEHYQEDMFAVQPPGSDRPPSSQSDDSTRHITDTLALKP 345

Query: 339 MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE 398
           MNCP H  +F H  +S+RELP+RLA+FG+++R E SG L GL R+R F QDDAH+FCT +
Sbjct: 346 MNCPAHCLMFAHRPRSWRELPLRLADFGALHRAEASGGLGGLTRLRCFQQDDAHIFCTTD 405

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNS 458
           Q+  E     + + S+Y   GF    + LSTRP   +G   LWD AE ++K  L      
Sbjct: 406 QLEAEIQSCLDFLRSVYAVLGF-SFRLALSTRPSGFLGDPCLWDQAEQVLKQALKEFGEP 464

Query: 459 SQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC 518
               +N+G    +GAFYGPK +  L DA+GR  QCGTIQ+DF LP RF+  Y        
Sbjct: 465 WD--LNSG----DGAFYGPKIDVHLHDALGRPHQCGTIQLDFQLPLRFDLQYKGQAGALE 518

Query: 519 HPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSH 578
            PV+IHRAV GS+ER +G++ E+  G  PLWLSP Q +V  + S   EYA+E    L++ 
Sbjct: 519 RPVLIHRAVLGSVERLLGVLAESCGGKWPLWLSPFQVVVIPVGSEQEEYAKEAQQSLRAA 578

Query: 579 HLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
            L  + D  +  T++ +IR   +       + G KE S+R++ IR
Sbjct: 579 GLVSDLDADSGLTLSRRIRRAQLAHYNFQFVVGQKEQSKRTVNIR 623



 Score = 60.8 bits (146), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 54/109 (49%), Gaps = 3/109 (2%)

Query: 2   PSDIKLTFPDGS-IKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
           P  IK++ P G  I     + T   +A  IS +LA  AVA  +NG+  DL  P+   S +
Sbjct: 58  PRTIKISLPGGQKIDAVAWNTTPYQLARQISSTLADTAVAAQVNGEPYDLERPLETDSDL 117

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF 108
             +T + P   AV  HS  H++  A +     V +  GP  E GFY+DF
Sbjct: 118 RFLTFDSPEGKAVFWHSSTHVLGAAAEQFLGAV-LCRGPSTEYGFYHDF 165


>gi|146169598|ref|XP_001017218.2| threonyl-tRNA synthetase family protein [Tetrahymena thermophila]
 gi|146145134|gb|EAR96973.2| threonyl-tRNA synthetase family protein [Tetrahymena thermophila
           SB210]
          Length = 882

 Score =  328 bits (842), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 183/469 (39%), Positives = 268/469 (57%), Gaps = 21/469 (4%)

Query: 46  KVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGF 104
           +V DL  P+  + ++E+I  E      V  HS AH++ +A++  +  V + IGP + +GF
Sbjct: 142 EVYDLERPLEGDCTLELIDFECQEGREVFWHSSAHMLGQALELNYG-VHLCIGPPLANGF 200

Query: 105 YYD-FDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE 163
           +YD +   +  S D  A+IEK   ++ +   PF +  L+ ++A ELF  K   +KV+++ 
Sbjct: 201 FYDSYMGNEKISQDNFAEIEKTFAKVASEKQPFQRVILTKKQALELF--KHNPFKVQLIT 258

Query: 164 S-IPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYG 222
           + IP     T Y+ G+  DLC GPH+  TG VK F K+ K + AYW G +    L R+YG
Sbjct: 259 NKIPDNAITTAYKCGKLIDLCTGPHLPHTGYVKAF-KVEKNSAAYWLGKNTNDGLQRVYG 317

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISY 282
            A+ +++EL  ++   EE  KRDHR + ++ +LF   +   G  F++  G  I+  L+  
Sbjct: 318 IAFPSKKELDAHVLRQEELAKRDHRNIGKQQELFTFHQFSPGCAFFYPNGAHIYNKLMEV 377

Query: 283 MRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           +R++ K   Y E+ TP + D  LW+ SGHWD Y+ NMF +K       D      KPMNC
Sbjct: 378 LRKQYKIRGYSEVITPNLFDAQLWKISGHWDKYKENMFLLK------NDNEEHGFKPMNC 431

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
           P H  +F+   +SYR+LP+R A+FG ++RNE  G+L GL RVR F QDDAH+FCT +Q+ 
Sbjct: 432 PAHCLMFDSIQRSYRDLPLRYADFGVLHRNEVHGALSGLTRVRRFQQDDAHIFCTMDQIM 491

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E     + I  +Y  FGF K  + LSTRP+  +G   +WD AEN +K  L+        
Sbjct: 492 EEIKNALDFIDYMYSLFGF-KYSLALSTRPDNYIGEIEMWDQAENALKKGLEAFGKP--- 547

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFY 510
                +   +GAFYGPK +  L DA  R  QCGTIQ+DFNLP RFN  Y
Sbjct: 548 ---WAIKAKDGAFYGPKIDIQLYDAFDRGHQCGTIQLDFNLPIRFNLQY 593



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 39/112 (34%), Positives = 62/112 (55%)

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH 579
           PV++HRAV GS ERF+ I+ E   G  P WLSP Q I+  IT+   ++AQ++A+ LK   
Sbjct: 675 PVILHRAVIGSFERFLAILCEQTAGKWPFWLSPKQLIICPITAKVNDFAQDVADRLKVEG 734

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
             +  D    TI  K+R   +++   I + G++E     + +R   +T  Q+
Sbjct: 735 YKVAVDLSESTIQKKVRNAQLEQYNYIAVVGEEEKRGGYVDLRARDTTKDQE 786


>gi|145511956|ref|XP_001441900.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124409161|emb|CAK74503.1| unnamed protein product [Paramecium tetraurelia]
          Length = 609

 Score =  328 bits (840), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 196/612 (32%), Positives = 321/612 (52%), Gaps = 46/612 (7%)

Query: 33  SLAKKAVAVAINGK-----VCDLSDPVREG-SIEIITPEDPRSLAVIRHSCAHIMAEAVQ 86
           S+ K A    +  K     + DL+  +++  +IE +   +  +  V  HS AH++   + 
Sbjct: 27  SVPKDAFIAKVTNKDGSTSLHDLNREIKQDCTIEFLDFSNQDARRVFWHSSAHVLGAILS 86

Query: 87  SIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ-IEKKMQEIIARDSPFLKQYLSHEK 145
               E++   GP  E+GFYY    ++    D+L Q IE+ +++   +   F  Q +S  +
Sbjct: 87  KFGAELE--FGPSTENGFYYQCKMDKEIELDQLNQEIEQYLKQ---KKHLFEIQSISQNE 141

Query: 146 ARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAG 205
           A +LF   K +YK+  ++   A +   +Y+  ++ DLC+GPH+  T ++ K   ++  + 
Sbjct: 142 ALQLFS--KNSYKLSKIKQT-AFQQYQIYKLDDFIDLCKGPHIDHTNRIYKL--IINHSQ 196

Query: 206 AYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGV 265
            Y           R  G A+   +   +Y    ++ ++ DHR + +   LF   +   G 
Sbjct: 197 PYQNS-------YRYQGIAFPNSKLFQEY----QKQQECDHRHIGKHQHLFVFNKLAPGS 245

Query: 266 IFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCA 324
            F+   G KI+  LI  +R++ ++  Y+E+ TPQ+ ++ LW+QSGH D Y  N++     
Sbjct: 246 AFFLPHGTKIYNKLIEMIRKEYRERGYQEVITPQLFNKELWKQSGHLDKYAENIYMTHD- 304

Query: 325 DDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVR 384
                      LKPMNCPGH  ++     SY+ELP+R A+FG ++RNE  G+L GL RVR
Sbjct: 305 -------HQMGLKPMNCPGHCLLYKTLQHSYKELPIRFADFGVLHRNEVHGTLTGLTRVR 357

Query: 385 GFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
            FTQDDAH+FCT EQ+  E     + +  +Y  FGF   +  LSTRP+K +G   +WD+A
Sbjct: 358 KFTQDDAHIFCTIEQIQQEIKNTLDFLSRVYGRFGFTWELT-LSTRPDKYIGDLQIWDEA 416

Query: 445 ENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPS 504
           E  ++  L   + +           G+GAFYGPK + +++D   +  QCGTIQ+DFNLP 
Sbjct: 417 ERQLRIALSDTQYTENP--------GDGAFYGPKIDVLIRDHNQKQHQCGTIQLDFNLPE 468

Query: 505 RFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA 564
           RF+  Y + + +   PVMIHRA+ GSIER + I+ E + G  P WLSP Q ++  ++  +
Sbjct: 469 RFDLTYHHENDKFSRPVMIHRAILGSIERMMAILTEQYNGKWPFWLSPRQVMIIPVSEIS 528

Query: 565 VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRF 624
            +YA+EI + L      +E +   +T+  +IR+  +     II  G KE    ++ +R  
Sbjct: 529 KQYAKEIYDQLYKLGFEVELEDTEQTLGKRIRKGEMLHFNYIITVGAKEQESNTVDVRER 588

Query: 625 GSTTTQKVSLLD 636
           G     +   LD
Sbjct: 589 GDNHKHQSMKLD 600


>gi|255582427|ref|XP_002532001.1| threonyl-tRNA synthetase, putative [Ricinus communis]
 gi|223528332|gb|EEF30374.1| threonyl-tRNA synthetase, putative [Ricinus communis]
          Length = 658

 Score =  328 bits (840), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 173/368 (47%), Positives = 243/368 (66%), Gaps = 19/368 (5%)

Query: 29  SISRSLAKKAVAVAINGKVCDLSDPVREGSIEIITP--EDPRSLAVIRHSCAHIMAEAVQ 86
           SIS ++A    A      + +  D  +E + +I+ P  E    L  IRH+CAH+MA AVQ
Sbjct: 62  SISTAVATTESAPVAQNDIAE--DTQKEETEKIVLPTNESSEKLLRIRHTCAHVMAMAVQ 119

Query: 87  SIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKA 146
            ++PE +V IGP IE+GFYYDFD E P +  +L +I+K+M  II ++ P +++ +S E+A
Sbjct: 120 KVYPEAKVTIGPWIENGFYYDFDME-PLTDKDLKRIKKEMDRIIGQNLPLVREEVSREEA 178

Query: 147 RELFESKKEAYKVEILESIPAKENVTLYRQG-EWFDLCRGPHVRSTGQV-KKFFKLMKVA 204
           ++   +  E YK+EIL+SI  ++ +T+Y  G EW+DLC GPHV STG + +K  +L  VA
Sbjct: 179 QKRIMAVNEPYKMEILDSI-KEDPITIYHIGDEWWDLCAGPHVESTGNINRKAVELESVA 237

Query: 205 GAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIA-EDGS 263
           GAYWRGD  RPML RIYGTAW  + +L  YL+F EE+++RDHR+L +++DLF I  E G 
Sbjct: 238 GAYWRGDEKRPMLQRIYGTAWENENQLKAYLHFKEEAKRRDHRRLGQDLDLFSIQDEAGG 297

Query: 264 GVIFWHRKGWKIFQTLI--SYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMF-A 320
           G++FWH KG  I + +I  S+ +  I+ DY+ + TP V    LW+ SGH D YR NM+  
Sbjct: 298 GLVFWHPKG-AIVRHIIEDSWKKIHIEHDYDLLYTPHVAKADLWKISGHLDFYRENMYDQ 356

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +K  D+       + L+PMNCP H+ V+   L SYR+ P+R+AE G+VYR E SGSLHGL
Sbjct: 357 MKIEDE------NYQLRPMNCPYHILVYKRKLNSYRDFPIRVAELGTVYRYELSGSLHGL 410

Query: 381 MRVRGFTQ 388
            RVRGFTQ
Sbjct: 411 FRVRGFTQ 418



 Score =  125 bits (315), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 62/131 (47%), Positives = 88/131 (67%), Gaps = 2/131 (1%)

Query: 496 IQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQA 555
           +QVDFNLP RF+  YV+S+SEK  P+MIHRAV GS+ERF G++IE++ G+ PLWLSPIQ 
Sbjct: 504 MQVDFNLPQRFDITYVDSNSEKKRPIMIHRAVLGSMERFFGVLIEHYAGDFPLWLSPIQV 563

Query: 556 IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEAS 615
            V  +T + +EY +E+ + LK + +  E  F  E +   IR    +KIP++ + G KE  
Sbjct: 564 RVLPVTDTQLEYCREVTSKLKENGIRTEL-FHGERLPKLIRNAEKQKIPLMAVVGPKEVE 622

Query: 616 ERSIGIR-RFG 625
            +S+ IR RF 
Sbjct: 623 TQSVTIRSRFS 633


>gi|148982342|ref|ZP_01816719.1| threonyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
 gi|145960522|gb|EDK25885.1| threonyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
          Length = 304

 Score =  327 bits (839), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 153/300 (51%), Positives = 201/300 (67%), Gaps = 6/300 (2%)

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           V +FN GLKSYR+LP+R+AEFGS +RNEPSG+LHG+MRVRGFTQDDAHVFCT++Q+  E 
Sbjct: 1   VQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGIMRVRGFTQDDAHVFCTEDQVQQEV 60

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
                ++   Y  FGFE I+VKLSTRPE+RVGSD +WD AE  +K  L++++      I 
Sbjct: 61  KACIEMVYDTYTTFGFENIVVKLSTRPEQRVGSDEMWDRAEADLKLALESME------IA 114

Query: 465 TGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIH 524
             +  GEGAFYGPK E+ L D + R WQCGT+Q+DF LP R  A YV   +E+  PVMIH
Sbjct: 115 YEIQEGEGAFYGPKIEFTLHDCLDRAWQCGTVQLDFALPERLGATYVGEDNERHTPVMIH 174

Query: 525 RAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIET 584
           RA+ GS+ERFIGI+IE + G  P WL+P QA+V  IT    EY QEI   L+     ++ 
Sbjct: 175 RAILGSLERFIGILIEEYAGFFPTWLAPEQAVVMGITDKQSEYVQEITKKLQKSGFRVKA 234

Query: 585 DFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           D RNE I +KIREH++K++P +++CGD+E     I +R        K  + D I  +  E
Sbjct: 235 DLRNEKIGFKIREHTLKRVPFMLVCGDQEMEAGEIAVRTRKGKDLGKFKVDDFISYIQAE 294


>gi|160876899|ref|YP_001556215.1| tRNA synthetase class II [Shewanella baltica OS195]
 gi|160862421|gb|ABX50955.1| tRNA synthetase class II (G H P and S) [Shewanella baltica OS195]
 gi|315269103|gb|ADT95956.1| tRNA synthetase class II (G H P and S) [Shewanella baltica OS678]
          Length = 398

 Score =  327 bits (838), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 155/398 (38%), Positives = 239/398 (60%), Gaps = 17/398 (4%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQ 302
           + HR++A ++DLFH      G+IFWH  GW +F+ +  +MRR  + + +EE+NTP  + +
Sbjct: 2   KTHREIAEQLDLFHSEPQAPGMIFWHPNGWALFRDIQEHMRRVYRRNGFEEVNTPVFMKK 61

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LWQ SGH D +  NMF         +++  + LKPM+CP H+ +F  G+ S+R+LP+RL
Sbjct: 62  ELWQTSGHMDMFAENMFF----GGGKENMGEYVLKPMSCPAHILLFKRGVHSHRDLPLRL 117

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG V+RNE SGSL+G +R R FTQDDAHVFC   Q   E          +Y D+G+  
Sbjct: 118 FEFGLVHRNESSGSLNGCLRARQFTQDDAHVFCCWSQAEEEICGFLQRAKQVYGDYGYHN 177

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + VK+ST+PEK +GSD  W  A+ ++            +  +     GEGAFYGPK E  
Sbjct: 178 LDVKISTKPEKALGSDEQWCRAQKLLDSACQI------EGFDAEYQAGEGAFYGPKIELS 231

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D++GR WQCGTIQ DFNLP RF+  Y N   E   PV++H+A++GSIER++GI++E  
Sbjct: 232 LTDSMGRRWQCGTIQFDFNLPERFDVQYTNEQGEFERPVIMHQAMYGSIERWLGILLEVS 291

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
           +GNLP WL P+   + ++  S  ++ +++A L  +  + +  D    ++  K++    +K
Sbjct: 292 QGNLPDWLHPVPVAIASVNESNSQFVRQLAALCLARDMRVLVDISQNSVARKMKRFHKQK 351

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
           +P I+  GDKE +E+ + ++       +K  ++  IP+
Sbjct: 352 VPYILTVGDKEEAEKCVSVK------CRKDGVMTHIPL 383


>gi|217974767|ref|YP_002359518.1| tRNA synthetase class II [Shewanella baltica OS223]
 gi|217499902|gb|ACK48095.1| tRNA synthetase class II (G H P and S) [Shewanella baltica OS223]
          Length = 398

 Score =  327 bits (838), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 155/398 (38%), Positives = 239/398 (60%), Gaps = 17/398 (4%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQ 302
           + HR++A ++DLFH      G+IFWH  GW +F+ +  +MRR  + + +EE+NTP  + +
Sbjct: 2   KTHREIAEQLDLFHSEPQAPGMIFWHPNGWVLFRDIQEHMRRVYRRNGFEEVNTPVFMKK 61

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LWQ SGH D +  NMF         +++  + LKPM+CP H+ +F  G+ S+R+LP+RL
Sbjct: 62  ELWQTSGHMDMFAENMFF----GGGKENMDEYVLKPMSCPAHILLFKRGVHSHRDLPLRL 117

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG V+RNE SGSL+G +R R FTQDDAHVFC   Q   E          +Y D+G+  
Sbjct: 118 FEFGLVHRNESSGSLNGCLRARQFTQDDAHVFCCWSQAEEEIRGFLQRAKQVYGDYGYHN 177

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + VK+ST+PEK +GSD  W  A+ ++            +  +     GEGAFYGPK E  
Sbjct: 178 LDVKISTKPEKALGSDEQWCRAQKLLDSACQI------EGFDAEYQAGEGAFYGPKIELS 231

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D++GR WQCGTIQ DFNLP RF+  Y N   E   PV++H+A++GSIER++GI++E  
Sbjct: 232 LTDSMGRRWQCGTIQFDFNLPERFDVHYTNEQGEFERPVIMHQAMYGSIERWLGILLEVS 291

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
           +GNLP WL P+   + ++  S  ++ +++A L  +  + +  D    ++  K++    +K
Sbjct: 292 QGNLPDWLHPVPVAIASVNESNSQFVRQLATLCLARDMRVLVDISQNSVARKMKRFHKQK 351

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
           +P I+  GDKE +E+ + ++       +K  ++  IP+
Sbjct: 352 VPYILTVGDKEEAEKCVSVK------CRKDGVMTHIPL 383


>gi|126172877|ref|YP_001049026.1| tRNA synthetase class II (G H P and S) [Shewanella baltica OS155]
 gi|125996082|gb|ABN60157.1| tRNA synthetase, class II (G, H, P and S) [Shewanella baltica
           OS155]
          Length = 403

 Score =  327 bits (837), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 152/380 (40%), Positives = 232/380 (61%), Gaps = 11/380 (2%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQ 302
           + HR++A ++DLFH      G+IFWH  GW +F+ +  +MRR  + + +EE+NTP  + +
Sbjct: 2   KTHREIAEQLDLFHSEPQAPGMIFWHPNGWALFRDIQEHMRRVYRRNGFEEVNTPVFMKK 61

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LWQ SGH D +  NMF         +++  + LKPM+CP H+ +F  G+ S+R+LP+RL
Sbjct: 62  ELWQTSGHMDMFAENMFF----GGGKENIDEYVLKPMSCPAHILLFKRGVHSHRDLPLRL 117

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG V+RNE SGSL+G +R R FTQDDAHVFC   Q   E          +Y D+G+  
Sbjct: 118 FEFGLVHRNESSGSLNGCLRARQFTQDDAHVFCCWSQAEEEIRGFLQRAKQVYGDYGYHN 177

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + VK+ST+PEK +GSD  W  A+ ++            +  +     GEGAFYGPK E  
Sbjct: 178 LDVKISTKPEKSLGSDEQWCRAQKLLDSACHI------EGFDAEYQAGEGAFYGPKIELS 231

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D++GR WQCGTIQ DFNLP RF+  Y N   E   PV++H+A++GSIER++GI++E  
Sbjct: 232 LTDSMGRRWQCGTIQFDFNLPERFDVQYANEQGEFERPVIMHQAMYGSIERWLGILLEVS 291

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
           +GNLP+WL P+   + ++  S  ++ +++A L  +  + +  D    ++  K++    +K
Sbjct: 292 QGNLPVWLHPVPVAIASVNESNSQFVRQLATLCLARDIRVLVDISQNSVARKMKRFHKQK 351

Query: 603 IPIIIICGDKEASERSIGIR 622
           +P I+  GDKE +E  + ++
Sbjct: 352 VPYILTVGDKEEAENRVSVK 371


>gi|304410724|ref|ZP_07392342.1| tRNA synthetase class II (G H P and S) [Shewanella baltica OS183]
 gi|307304819|ref|ZP_07584569.1| tRNA synthetase class II (G H P and S) [Shewanella baltica BA175]
 gi|304351208|gb|EFM15608.1| tRNA synthetase class II (G H P and S) [Shewanella baltica OS183]
 gi|306912221|gb|EFN42645.1| tRNA synthetase class II (G H P and S) [Shewanella baltica BA175]
          Length = 403

 Score =  326 bits (836), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 152/380 (40%), Positives = 232/380 (61%), Gaps = 11/380 (2%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQ 302
           + HR++A ++DLFH      G+IFWH  GW +F+ +  +MRR  + + +EE+NTP  + +
Sbjct: 2   KTHREIAEQLDLFHSEPQAPGMIFWHPNGWALFRDIQEHMRRVYRRNGFEEVNTPVFMKK 61

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LWQ SGH D +  NMF         +++  + LKPM+CP H+ +F  G+ S+R+LP+RL
Sbjct: 62  ELWQTSGHMDMFAENMFF----GGGKENIDEYVLKPMSCPAHILLFKRGVHSHRDLPLRL 117

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG V+RNE SGSL+G +R R FTQDDAHVFC   Q   E          +Y D+G+  
Sbjct: 118 FEFGLVHRNESSGSLNGCLRARQFTQDDAHVFCCWSQAEEEIRGFLQRAKQVYGDYGYHN 177

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + VK+ST+PEK +GSD  W  A+ ++            +  +     GEGAFYGPK E  
Sbjct: 178 LDVKISTKPEKALGSDEQWCRAQKLLDSACQI------EGFDAEYQAGEGAFYGPKIELS 231

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D++GR WQCGTIQ DFNLP RF+  Y N   E   PV++H+A++GSIER++GI++E  
Sbjct: 232 LTDSMGRRWQCGTIQFDFNLPERFDVQYANEQGEFERPVIMHQAMYGSIERWLGILLEVS 291

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
           +GNLP WL P+   + ++  S  ++ +++A L  +  + +  D    ++  K++    +K
Sbjct: 292 QGNLPDWLHPVPVAIASVNESNSQFVRQLAALCLARDMRVLVDISQNSVARKMKRFHKQK 351

Query: 603 IPIIIICGDKEASERSIGIR 622
           +P I+  GDKE +E+ + ++
Sbjct: 352 VPYILTVGDKEEAEKCVSVK 371


>gi|15921207|ref|NP_376876.1| threonyl-tRNA synthetase [Sulfolobus tokodaii str. 7]
 gi|22654128|sp|Q973C8|SYT_SULTO RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|15621992|dbj|BAB65985.1| 540aa long hypothetical threonyl-tRNA synthetase [Sulfolobus
           tokodaii str. 7]
          Length = 540

 Score =  325 bits (834), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 165/431 (38%), Positives = 256/431 (59%), Gaps = 18/431 (4%)

Query: 219 RIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQ 277
           RI G  +  ++EL QYL +LEE  + DHR +   +DLF    E   G+  +H KG  I +
Sbjct: 108 RIRGVGFEKKEELDQYLKWLEEVSEYDHRIIGERLDLFSFPDETAPGLALFHYKGQIIRK 167

Query: 278 TLISYMRRKIKDD--YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFA 335
            L+ +M  +I +   Y+E+ T ++    LW+ SGH+D Y+  M   K  D+ +       
Sbjct: 168 ELMKFME-EINESMGYQEVFTAEIYRSILWKTSGHYDYYKDKMVLFKMEDEEL------G 220

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC 395
           LKPMNCP H+ ++    +SY++LP+R +EFG V+R E  G L+GL+RVRGF QDD H+F 
Sbjct: 221 LKPMNCPAHILIYKSKTRSYKDLPIRFSEFGLVFRWEKRGELYGLLRVRGFVQDDGHIFL 280

Query: 396 TKEQMFNECLKIHNLIISIYKDFGF--EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
           T++Q+ +E   +    I +   FGF  + + + LSTRP++ +GSD LW+ A N +   L+
Sbjct: 281 TEDQIKDEVKMLVKKTIDVLSIFGFKGDDVRINLSTRPDESIGSDELWEKATNALVSALN 340

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS 513
            +       I   V   EGAFYGPK ++ ++D++GR WQ  TIQVDFNLP RF   Y++ 
Sbjct: 341 ELG------IKYIVKEKEGAFYGPKIDFDIRDSLGRWWQLSTIQVDFNLPERFKLEYIDK 394

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIAN 573
              +  PVMIHRA++GSIERF+ I++E+F+G LP WLSP+Q  +  I+    +YA  + +
Sbjct: 395 DGSRKRPVMIHRAIYGSIERFMAILLEHFRGKLPTWLSPVQVRILPISKDVEDYALNLLS 454

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            LK + + +E D  +ET++ +I++   + +P +II G KE  E  + +R   +   + V 
Sbjct: 455 KLKENKIRVELDMSDETLSKRIKKAYDEGVPYMIIVGKKEREEGKVTVRGRNNVEIRGVK 514

Query: 634 LLDAIPILTKE 644
             D +  L +E
Sbjct: 515 FDDFLKALLEE 525


>gi|159476198|ref|XP_001696198.1| hypothetical protein CHLREDRAFT_167047 [Chlamydomonas reinhardtii]
 gi|158282423|gb|EDP08175.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 688

 Score =  325 bits (834), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 199/624 (31%), Positives = 326/624 (52%), Gaps = 37/624 (5%)

Query: 5   IKLTFPDGSIKNFPVHATGS-DVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           IK+  PDG  +      T   D+A+ IS SLAKK V   ++G   DL+ P+  + ++++ 
Sbjct: 46  IKVIMPDGKERAAVQGVTTPMDIAKEISASLAKKVVVADVDGHAWDLARPLEGDCALKLF 105

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQ 121
           + +D        HS AH++ +A++  +  V + IGP +E+GFYYD F  ++  +  + A+
Sbjct: 106 SFDDTEGKDAFWHSSAHLLGQALELEFG-VDLTIGPALEEGFYYDCFMGDRTLTEADKAR 164

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +EK+++  +     F +  ++ E+A  +FE  K  +K+EI++ +PA   +T+YR G   D
Sbjct: 165 LEKRIEGSVKESQKFQRVVVTREEALSMFEENK--FKIEIIQGLPADATITIYRVGPMVD 222

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LC GPH+ ST  +K    + +++ A+WRGD  R  L R+YG  +   + L  Y + +EE+
Sbjct: 223 LCSGPHLPSTSYMKAI-SVTQMSRAFWRGDVKREPLQRVYGVTFPDSKLLKDYQHRMEEA 281

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVL 300
           +KRDHR +  + +LF       G  F+   G +I+  L+ Y+R +  + +YEE+ TP + 
Sbjct: 282 KKRDHRVVGVQQELFFFHPLSPGSCFFLPHGARIYNNLVGYIREKYWEYEYEEVITPNIY 341

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  LW+ SGH D YR NMF+         + + F LKPMNCP                P 
Sbjct: 342 NFDLWKTSGHADHYRENMFSFDI------EKQEFGLKPMNCPARAL----------HAPD 385

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM--FNECLKIHNLIISIYKDF 418
           RL           +  L+             + F +   M    E      L+  +Y+ F
Sbjct: 386 RLGTLSP----HTTTLLYPHRPPPPPPPVPGYAFTSLVIMSVMAEVQGFLKLLGEVYEVF 441

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           G +  M  LSTRPE  +G   LW+ AE  +   L++   +    +N     G+GAFYGPK
Sbjct: 442 GLDCTMA-LSTRPEGYLGDIELWNKAEQALTDALNSTGKAWV--LNP----GDGAFYGPK 494

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +  + DA+ R +QC T+Q+DF LP RF   Y +       PV++HRAV GS+ER   I+
Sbjct: 495 IDITVYDALRRKFQCATVQLDFQLPIRFGLEYASEAGTLERPVIVHRAVLGSVERMFAIL 554

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
            E+F G  P WL+P Q +V  I+ ++VEYA  +   L+S  L  + D  +  +  K+RE 
Sbjct: 555 TEHFAGKWPFWLNPRQVMVVPISENSVEYAFTVRKELRSAGLHCDVDSTDRKMQKKVREA 614

Query: 599 SIKKIPIIIICGDKEASERSIGIR 622
            + +   I++ G+ E + +++ +R
Sbjct: 615 QLAQYNYILVVGEAEKTAQTVNVR 638


>gi|153002179|ref|YP_001367860.1| tRNA synthetase class II (G H P and S) [Shewanella baltica OS185]
 gi|151366797|gb|ABS09797.1| tRNA synthetase class II (G H P and S) [Shewanella baltica OS185]
          Length = 398

 Score =  325 bits (833), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 157/398 (39%), Positives = 242/398 (60%), Gaps = 17/398 (4%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQ 302
           + HR++A ++DLFH      G+IFWH  GW +F+ +  ++RR  + + +EE+NTP  + +
Sbjct: 2   KTHREIAEQLDLFHSEPQAPGMIFWHPNGWALFRDIQEHIRRVYRRNGFEEVNTPVFMKK 61

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LWQ SGH D +  NMF         +++  + LKPM+CP H+ +F  G+ S+R+LP+RL
Sbjct: 62  ELWQTSGHMDMFAENMFF----GGGKENIDEYVLKPMSCPAHILLFKRGVHSHRDLPLRL 117

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG V+RNE SGSL+G +R R FTQDDAHVFC   Q   E          +Y D+G+  
Sbjct: 118 FEFGLVHRNESSGSLNGCLRARQFTQDDAHVFCCWSQAEEEIRGFLQRAKQVYGDYGYHN 177

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + VK+ST+PEK +GSD  W  A+ +    LD+   S  +  +     GEGAFYGPK E  
Sbjct: 178 LDVKISTKPEKALGSDEQWRRAQKL----LDSACYS--EGFDAEYQAGEGAFYGPKIELS 231

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D++GR WQCGTIQ DFNLP RF+  Y N   E   PV++H+A++GSIER++GI++E  
Sbjct: 232 LTDSMGRCWQCGTIQFDFNLPERFDVQYTNEQGEFERPVIMHQAMYGSIERWLGILLEVS 291

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
           +GNLP WL P+   + ++  S  ++ +++A L  +  + +  D    ++  K++    +K
Sbjct: 292 QGNLPDWLHPVPVAIASVNESNSQFVRQLATLCLARDMRVLVDISQNSVARKMKRFHKQK 351

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
           +P I+  GDKE +E+ + ++       +K  ++  IP+
Sbjct: 352 VPYILTVGDKEEAEKCVSVK------CRKDGVMTHIPL 383


>gi|261749266|ref|YP_003256951.1| threonyl-tRNA synthetase [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
 gi|261497358|gb|ACX83808.1| threonyl-tRNA synthetase [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
          Length = 408

 Score =  325 bits (833), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 169/413 (40%), Positives = 253/413 (61%), Gaps = 27/413 (6%)

Query: 245 DHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           DHRK+ +++  F  ++  G+G+  W  +G    + L  ++   + K  YE I TP +  +
Sbjct: 10  DHRKIGKKLKFFIFSDRVGTGLPLWLPRGTIFRRNLEEFLTDIQKKSGYEMIMTPHIGHK 69

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRT------FALKPMNCPGHVAVFNHGLKSYR 356
            L+ +SGHWD Y           D+ K ++T      F LKPMNCP H  V+     SYR
Sbjct: 70  KLYVRSGHWDKY---------GKDSFKPIQTPHSEEEFLLKPMNCPHHCEVYRSQEWSYR 120

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +LP R AEFG+VYR E SG LHGL RVR FTQDDAH+FCT +Q+  E  K+ NL+  +++
Sbjct: 121 DLPKRFAEFGTVYRYEQSGELHGLTRVRCFTQDDAHIFCTYDQLLEEFKKVINLVFYVFR 180

Query: 417 DFGFEKIMVKLSTRPEKRV----GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
             GF +  +++S R  K++    GSD  W+ AEN +      I+   +++++  +  GE 
Sbjct: 181 RLGFLEYTIRVSLRDPKKIHNYIGSDKNWEMAENAI------IQAVKEEKLDASLHYGEA 234

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           AFYGPK ++++KD++ R+WQ GTIQVD+NLP RF+ +Y   ++E+  PVMIHRA  GS+E
Sbjct: 235 AFYGPKLDFLIKDSLDRNWQLGTIQVDYNLPERFDLYYKGKNNERHRPVMIHRAPLGSLE 294

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
           R I I+IE+ KGNLPLWL P QA++  I+   + YA++I NL+ +H++ +  D RNE I+
Sbjct: 295 RLIAILIEHTKGNLPLWLVPNQAVILPISDKYIIYAKKILNLMLNHNIRVFLDERNEKID 354

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
            KIR+    KIP +II G+KE   + I +RR G       ++ + I  + KE+
Sbjct: 355 KKIRDSEENKIPYMIILGEKEEKNKMISLRRHGLGHIGIFTISNGIDAIFKET 407


>gi|145534943|ref|XP_001453210.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124420921|emb|CAK85813.1| unnamed protein product [Paramecium tetraurelia]
          Length = 609

 Score =  324 bits (831), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 196/614 (31%), Positives = 321/614 (52%), Gaps = 50/614 (8%)

Query: 33  SLAKKAVAVAINGK-----VCDLSDPVREG-SIEIITPEDPRSLAVIRHSCAHIMAEAVQ 86
           S+ K A    +  K     + DL+  +++  +IE +   +  +  V  HS AH++   + 
Sbjct: 27  SVPKDAFIAKVTNKDGSTSLHDLNRELKQDCTIEFLDFSNQDARRVFWHSSAHVLGAILS 86

Query: 87  SIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ-IEKKMQEIIARDSPFLKQYLSHEK 145
               E++   GP  E+GFYY    ++    D+L Q IE+ +++   +   F  Q +S ++
Sbjct: 87  KFGAELE--FGPSTENGFYYQCKLDKEIELDQLNQEIEQYLKQ---KKHLFEIQSISQDE 141

Query: 146 ARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAG 205
           A +LF   K AYK+  ++   A +N  +Y+  ++ DLC+GPH+  T ++ K         
Sbjct: 142 ALQLF--NKNAYKLSKIKQT-AFQNYQIYKLDDFVDLCKGPHIDHTNRIYKLII------ 192

Query: 206 AYWRGDSNRPMLS--RIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGS 263
                + ++P  +  R  G A+   +    Y    ++  + DHR + ++  LF   +   
Sbjct: 193 -----NHSQPFQNSYRYQGIAFPNSKLYQDY----QKQMECDHRHIGKQNHLFVFNKLAP 243

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK 322
           G  F+   G KI+  L+  +R++ ++  Y+E+ TPQ+  + LW+QSGH D Y  N++   
Sbjct: 244 GSAFFLPHGTKIYNKLVEMIRKEYRERGYQEVITPQLFHKDLWKQSGHLDKYAENIYMTH 303

Query: 323 CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMR 382
                        LKPMNCPGH  ++     SY+ELP+R A+FG ++RNE  G+L GL R
Sbjct: 304 D--------HQMGLKPMNCPGHCLLYKTLQHSYKELPIRFADFGVLHRNEVHGTLTGLTR 355

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWD 442
           VR FTQDDAH+FCT EQ+  E     + +  +Y  FGF   +  LSTRP+K +G   +WD
Sbjct: 356 VRKFTQDDAHIFCTIEQIQQEIKNTLDFLSKVYGRFGFTWELT-LSTRPDKYIGDLQIWD 414

Query: 443 DAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNL 502
           +AE  ++  L     +           G+GAFYGPK + +++D   +  QCGTIQ+DFNL
Sbjct: 415 EAERQLRIALSDTPYTENP--------GDGAFYGPKIDVLIRDHNQKQHQCGTIQLDFNL 466

Query: 503 PSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITS 562
           P RF+  Y + + +   PVMIHRA+ GSIER + I+ E + G  P WLSP Q ++  ++ 
Sbjct: 467 PERFDLTYHHENDKFSRPVMIHRAILGSIERMMAILTEQYNGRWPFWLSPRQVLIIPVSE 526

Query: 563 SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
            + +YA+EI + L      +E +   +T+  +IR+  +     I+  G KE    ++ +R
Sbjct: 527 VSKQYAKEIYDQLYKLGFEVELEDSEQTLGKRIRKGEMLHFNYILTLGAKEQESNTVDVR 586

Query: 623 RFGSTTTQKVSLLD 636
             G     +   LD
Sbjct: 587 ERGDNHKHQSMKLD 600


>gi|116179548|ref|XP_001219623.1| hypothetical protein CHGG_00402 [Chaetomium globosum CBS 148.51]
 gi|88184699|gb|EAQ92167.1| hypothetical protein CHGG_00402 [Chaetomium globosum CBS 148.51]
          Length = 716

 Score =  323 bits (827), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 219/700 (31%), Positives = 327/700 (46%), Gaps = 137/700 (19%)

Query: 4   DIKLTFPDGSIKNFPVH-ATGSDVAESISRSLAKKAVAVAINGK-VCDLSDPVREG-SIE 60
           +I +T PDG++K    +  T +D+A+ IS SL K+ V   I+G+ + D+  P+ +   +E
Sbjct: 72  EILITMPDGTVKPGKAYETTPADIAKGISNSLYKRTVVARIDGEHLWDIERPIEKSCKLE 131

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD--FDKEQPFSSDE 118
           ++   D +   V                           +++GFYY+          S +
Sbjct: 132 LLDFNDDQGKFVFS-------------------------VDNGFYYEMALPGGAAVQSTD 166

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQG 177
            A +E  + +I+    PF +  +S E   ++F      YKV I+ + I      T+YR G
Sbjct: 167 WAPLESIVTKIVKEKQPFQRLEMSKENLLKMFAYN--PYKVHIINDKIADGTRTTVYRNG 224

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
               L                           GD+N   L RIYG ++  ++++  +  F
Sbjct: 225 PLIFL---------------------------GDANNDSLQRIYGVSFPDKKQMAAHKKF 257

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINT 296
           LEE+ KRDHR + ++ +LF+  E   G   W   G +I   ++ Y+R +  K DY+E+ T
Sbjct: 258 LEEAAKRDHRLIGKQQELFYFEESSPGSAMWLPHGMRINNAIMDYIREEYWKRDYDEVMT 317

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P + +  LW+QSGH   Y+ +MF +        D   F LKPMNCPGH           +
Sbjct: 318 PNMFNVSLWEQSGHLAHYKEDMFLLDV------DKEQFGLKPMNCPGH-----------K 360

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ELP+RLA+FG ++RNE SG+L GL RVR F QDDAH+FC ++Q+  E   + + + S Y 
Sbjct: 361 ELPLRLADFGVLHRNEASGALSGLTRVRRFQQDDAHIFCREDQIKEEVADLFDFMSSFYG 420

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
             G     +KLSTRP+K +G  + WD AE  +K  L+    ++ + +   +  G+GAFYG
Sbjct: 421 MLGL-TFKLKLSTRPDKFMGEISTWDSAEARLKEALNEFA-AANEGVTWELNAGDGAFYG 478

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS--------------------- 515
           PK +     A+ R WQC TIQ+DF  P  F+  Y  + S                     
Sbjct: 479 PKVDI----AVLRQWQCATIQLDFQQPINFSLEYQTAESVQKDKKDAAPAPAPAPAPVPA 534

Query: 516 --------EK--------------------CHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
                   EK                      PVMIHRA+ GSIERF  I+ E+F G  P
Sbjct: 535 PVPDGTAEEKKDGREKKKPLLVKKPLAPGCARPVMIHRAMAGSIERFTAILAEHFAGKWP 594

Query: 548 LWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIII 607
            W+SP Q IV  +    + YA+E+A LLK     ++ D    T+  KIR   + +     
Sbjct: 595 YWMSPRQVIVIPVGMGFLGYAKEVAALLKKERFHVDVDSSGNTLQKKIRNGQLAQYNFCF 654

Query: 608 ICGDKEASERSIGIRRFGSTTTQK----VSLLDAIPILTK 643
           + GD E   R + IR    T+TQ     V L DAI  L K
Sbjct: 655 VVGDDEMRNRKVNIRYRDDTSTQARDVPVDLEDAIEKLRK 694


>gi|50364993|ref|YP_053418.1| threonyl-tRNA synthetase [Mesoplasma florum L1]
 gi|50363549|gb|AAT75534.1| threonyl-tRNA synthetase [Mesoplasma florum L1]
          Length = 644

 Score =  322 bits (825), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 201/643 (31%), Positives = 331/643 (51%), Gaps = 27/643 (4%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K+   DGSIK F        +AE+I+ SL K   A  +NG+   +   + ++ ++E+IT
Sbjct: 1   MKIKLLDGSIKEFDQATNVRTIAETIAISLKKATAAAKVNGRYVSVDYVIEKDSNLELIT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYY--DFDKEQPFSSDELAQ 121
                    + ++ A +   A+  ++ +V++A     ED   Y   F+ E     +EL  
Sbjct: 61  NRHEDFYKTLNYTAAFVTGVAISELYKDVKLAKVLYKEDELEYGITFEVEPRIGLEELQN 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWF 180
           I+ K+ +II  +S  L + +  ++A E+F  K   Y++ +  E       +T+Y      
Sbjct: 121 IQNKVNQIIKNES-ILSKEMDLKEAEEIF--KGNQYQLHLAKEMFETYGEITVYTLNGVS 177

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
            + + P   +   +K   ++ ++ G YW  DS   ML +++G A  + + L+     LE+
Sbjct: 178 IVSKHPITLNLKNIK-VVEVQQLTGEYWLNDSKNIMLQKVHGMAAESIETLSSKKEILED 236

Query: 241 SEKRDHRKLAREMDLF---HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
              RDHR + + + +F   H+   G G+  W   G  + + +  Y++ K  + DY  + T
Sbjct: 237 RRSRDHRIINKTLKIFGFDHLV--GPGLPLWMPNGTIVKEEIKKYLKEKEWEYDYINVTT 294

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +    L+++SGHWD Y  +MF          +   F L+PMNCP HVAV+    +SYR
Sbjct: 295 PVIGTVELYKKSGHWDHYGEDMFQPFNGGSGSDE--QFILRPMNCPHHVAVYKQEQRSYR 352

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +LP+R+AE    +R E SGSL GL RVR     D+H+F   +Q+  E   I+ LI  + +
Sbjct: 353 DLPLRIAEHALQHRYESSGSLTGLERVRAMELTDSHIFVRPDQVEAEFKSIYKLITEVLE 412

Query: 417 DFGFEKIMVKLSTR-PEKRVG---SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
            F  +   + LS R PE +V     D +WD+AE  ++ VL  +       I+    +GE 
Sbjct: 413 TFNIQIDYLSLSLRDPEDKVKYYQDDKMWDEAEAALEKVLQDL------NIDYKKCIGEA 466

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           AFYGPK +  +K A   +    TIQ+DF LP +F+  Y++ + E   P+MIHR + G+ E
Sbjct: 467 AFYGPKLDIQIKTAQNHEITVSTIQLDFLLPKKFDVTYIDQNQEFKAPIMIHRGLIGTYE 526

Query: 533 RFIGIMIENFKGNLPLWLSPIQ-AIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           RFI  ++E  KG LPLWL+P Q  I+   +   +EYA E+   LK   +    D R+E +
Sbjct: 527 RFIATLLEQTKGVLPLWLAPNQIEIIPVGSEENIEYANEVKKQLKKDFIRTHVDLRDERL 586

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           +YKIR+    KIP  ++ GD+E  + S+  R++GS     + L
Sbjct: 587 SYKIRDAQTSKIPYQLVLGDQERKDNSVTYRQYGSEQQTTIKL 629


>gi|145511255|ref|XP_001441555.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124408805|emb|CAK74158.1| unnamed protein product [Paramecium tetraurelia]
          Length = 937

 Score =  321 bits (822), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 183/500 (36%), Positives = 283/500 (56%), Gaps = 20/500 (4%)

Query: 25  DVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAE 83
           DV    + S A   +    +  + DL+ P+  + S+E+++ +D     V  HS AHI+  
Sbjct: 111 DVDHEETSSQASSTIHQKPDYLIWDLTRPLEGDCSLELLSFDDKNGQEVFWHSSAHILGA 170

Query: 84  AVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLS 142
           A++ I+    + IGP IE GF+YD +  +   + ++  +IEK  Q+++A    F +  L+
Sbjct: 171 ALEEIYG-CHLCIGPAIEGGFFYDCYIGDIKVTQNDYVKIEKAAQDLVAAKQEFQRAILT 229

Query: 143 HEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMK 202
            E+  E+F S     ++ I   IP     T YR G   DLC GPH+ +T  VK F ++ K
Sbjct: 230 KEECLEIFGSNPFKRQL-ITNKIPDGSLTTAYRCGNLIDLCTGPHLPNTSYVKAF-QITK 287

Query: 203 VAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDG 262
            + AYW G +    L R+YG  +  ++ L +Y+   +E  +RDHR + ++ +L+   +  
Sbjct: 288 NSAAYWLGKNTNDDLQRVYGITFPNKKLLDEYVKIQKELAQRDHRNVGKKQNLYLFHQLS 347

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
            G  F++  G  I+ TL++++RR+     Y+E+ +P + +  LW+ SGH+D Y+ N+F +
Sbjct: 348 PGSAFFYPSGAHIYNTLMNFLRRQYYIRGYQEVISPNIFNAQLWKISGHYDKYKENLFFI 407

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
              ++       + LKPMNCPGH  +F+    SYR+LP+R A+FG ++RNE  G+L GL 
Sbjct: 408 NMGEEG-----EYGLKPMNCPGHCLMFDMVQHSYRDLPIRFADFGVLHRNEVHGALTGLT 462

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALW 441
           RVR F QDDAH+FC  +Q+ +E     + +  IY  FGFE   + LSTRPEK +G+  +W
Sbjct: 463 RVRRFQQDDAHIFCRMDQIQDEIKNCLDFLSYIYSLFGFE-FKLYLSTRPEKFLGTKDVW 521

Query: 442 DDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFN 501
           D+AE  ++  L   K      IN     G+GAFYGPK +  L DA  R+ QCGTIQ+DFN
Sbjct: 522 DNAEYQLEQGLK--KFGKHFEINP----GDGAFYGPKIDVKLYDAYKREHQCGTIQLDFN 575

Query: 502 LPSRFNAFYVNSHSEKCHPV 521
           LP RFN  +    SE  H V
Sbjct: 576 LPERFNLQF--RASEDVHEV 593



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 71/131 (54%), Gaps = 5/131 (3%)

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH 579
           PV+IHRA+ GS+ER I ++ E   G  P WLSP Q I+  +++   + A++I+  L+   
Sbjct: 731 PVIIHRAILGSLERMIAVLTEQCGGKWPFWLSPKQLILCPVSAYYRDVAEKISARLRLEG 790

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
            ++ TD  ++T+  K+R   ++    + + G++E     I IR     T  ++  L  IP
Sbjct: 791 YTVNTDESDQTLAKKVRNAQVQYYNFVGVIGEEEVRTGVIDIRDCEKNT--RIGKL-TIP 847

Query: 640 ILTK--ESLPP 648
            L K  ESL P
Sbjct: 848 QLCKFFESLKP 858


>gi|50959620|gb|AAH74887.1| TARSL2 protein [Homo sapiens]
          Length = 441

 Score =  320 bits (821), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 167/420 (39%), Positives = 246/420 (58%), Gaps = 16/420 (3%)

Query: 206 AYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGV 265
            YW G+     L RIYG ++   + +  +  F EE++ RDHRK+ +E +LF   +   G 
Sbjct: 1   TYWEGNPEMETLQRIYGISFPDNKMMRDWEKFQEEAKNRDHRKIGKEQELFFFHDLSPGS 60

Query: 266 IFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCA 324
            F+  +G  I+ TL  ++R +  K D+ E+ +P + +  LW+ SGHW  Y  NMF  +  
Sbjct: 61  CFFLPRGAFIYNTLTDFIREEYHKRDFTEVLSPNMYNSKLWEASGHWQHYSENMFTFEIE 120

Query: 325 DDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVR 384
            DT      FALKPMNCPGH  +F H  +S+RE+P+R A+FG ++RNE SG+L GL RVR
Sbjct: 121 KDT------FALKPMNCPGHCLMFAHRPRSWREMPIRFADFGVLHRNELSGTLSGLTRVR 174

Query: 385 GFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
            F QDDAH+FCT EQ+  E       + S+Y  FGF    + LSTRPE  +G   +W++A
Sbjct: 175 RFQQDDAHIFCTVEQIEEEIKGCLQFLQSVYSTFGF-SFQLNLSTRPENFLGEIEMWNEA 233

Query: 445 ENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPS 504
           E  ++  L  +      ++N     G+GAFYGPK +  +KDAIGR  QC TIQ+DF LP 
Sbjct: 234 EKQLQNSL--MDFGEPWKMNP----GDGAFYGPKIDIKIKDAIGRYHQCATIQLDFQLPI 287

Query: 505 RFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSS 563
           RFN  YV+    +K  PV+IHRA+ GS+ER I I+ EN+ G  P WLSP Q +V  +  +
Sbjct: 288 RFNLTYVSKDGDDKKRPVIIHRAILGSVERMIAILSENYGGKWPFWLSPRQVMVIPVGPT 347

Query: 564 AVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
             +YA ++++         + D  +  T+N KIR   + +   I++ G+KE  + ++ +R
Sbjct: 348 CEKYALQVSSEFFEEGFMADVDLDHSCTLNKKIRNAQLAQYNFILVVGEKEKIDNAVNVR 407


>gi|295099750|emb|CBK88839.1| threonyl-tRNA synthetase [Eubacterium cylindroides T2-87]
          Length = 391

 Score =  320 bits (820), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 164/395 (41%), Positives = 240/395 (60%), Gaps = 16/395 (4%)

Query: 253 MDLFHIAEDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHW 311
           M LF ++E   G+  +   G  +   L  +      K  Y+ I TP ++ + LW+ SGHW
Sbjct: 1   MGLFTVSEYAPGMPIFLPNGMILRNILEQFWYEEHTKAGYQFIKTPIMMSKELWETSGHW 60

Query: 312 DSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRN 371
           + Y+ NM+       T+ D R FA+KPMNCPG + V+N  L SY+ELP R+ E G V+R+
Sbjct: 61  EHYKENMYT------TMVDDREFAIKPMNCPGALLVYNSSLHSYKELPYRIGELGQVHRH 114

Query: 372 EPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP 431
           E SG+L+GL RVR FTQDDAH+F T +Q+ +E   +  LI  IY  FG     ++LSTRP
Sbjct: 115 EASGALNGLFRVRTFTQDDAHLFVTPDQIESEVKNVLGLIDRIYSVFGL-PYDIELSTRP 173

Query: 432 EK-RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRD 490
           E   +GS+ +W  +E  +      I    + ++N G    +GAFYGPK +  +KD++GR 
Sbjct: 174 ESGYIGSEEIWQKSEEALANA--CIHAGKEYKVNPG----DGAFYGPKLDIHIKDSLGRV 227

Query: 491 WQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL 550
           WQCGTIQ+D NLP RF   YV+    K  PVM+HR ++GSIERFIGI+IE+F G+ PLWL
Sbjct: 228 WQCGTIQLDMNLPERFGCTYVDKDGSKKTPVMLHRVIYGSIERFIGILIEHFAGHFPLWL 287

Query: 551 SPIQAIVTTI-TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIIC 609
           +P Q +V  +     +EYAQ++   L+   + +E D RNE + Y++RE  + K+P  I+ 
Sbjct: 288 APRQFVVIPVHQEKHLEYAQKVVKALQDAGMRVELDDRNEKLGYRVREAQMSKVPYQIVV 347

Query: 610 GDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           GD EA   ++ IR+ G   ++ ++L +A+    KE
Sbjct: 348 GDGEAENETVTIRQSGKKESKTMALNEALEKFVKE 382


>gi|167536887|ref|XP_001750114.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163771443|gb|EDQ85110.1| predicted protein [Monosiga brevicollis MX1]
          Length = 550

 Score =  320 bits (819), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 186/577 (32%), Positives = 303/577 (52%), Gaps = 44/577 (7%)

Query: 50  LSDPVREG-SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF 108
           ++ P+ E  +++ +  +D        HS AHI+  A++  +    +  GP I+DGF+YD 
Sbjct: 1   MTRPLEEDCTLQFLKFDDEEGRDTFWHSSAHILGLAMEHYFGG-NLCYGPPIKDGFFYDM 59

Query: 109 D-KEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPA 167
           +  ++  S ++   +E    +      PF +  +S E    +F+  +  +K  +++    
Sbjct: 60  EMGDRHVSEEDFKTLESLATKATKAKYPFQRLIVSKENLLRMFQ--ENPFKQRLIKERIQ 117

Query: 168 KENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNT 227
           +   T+YR G   DLC GPH+R+TGQ+K F+ + K +  YW G ++   L R+Y  ++  
Sbjct: 118 EAATTVYRCGPLIDLCHGPHIRNTGQIKAFW-VHKCSSTYWEGKADAETLQRVYAVSFPD 176

Query: 228 QQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK- 286
           ++ L  +   L E+ KRDHRK+ RE +LF   +   G  F+  +G +I++TL+  +R + 
Sbjct: 177 KKMLKDHKELLAEAAKRDHRKIGREQELFFFHDLSPGSCFFLPRGARIYRTLMEMIREQY 236

Query: 287 IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA 346
           IK  + E+ TP + +++LW+ SGHW  Y+ N+F+ +   +       FA+KPMNCP H  
Sbjct: 237 IKRGFSEVVTPNIFNKNLWETSGHWQHYQENIFSFEVEKEI------FAMKPMNCPSHCI 290

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           +F H  +SYRELP+R A+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+  E   
Sbjct: 291 MFGHRKRSYRELPLRFADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCEPEQIEEEIKG 350

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
             + +  +Y  FGFE   + LSTRPEK +G   +W+ AE+ ++  L++  +     IN  
Sbjct: 351 CLDFLNEVYGIFGFE-FELHLSTRPEKYLGEIEVWNRAESALESALNSCGHPWS--INP- 406

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
              G+GAFYGPK +  + DA+ R  Q   +                            R 
Sbjct: 407 ---GDGAFYGPKIDIKVTDALRRQHQVRPLCCSGE-----------------------RD 440

Query: 527 VFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF 586
           ++ S  R   I+ E+  G  P WLSP QAIV  +     EYA+E+         +I+ D 
Sbjct: 441 LWASPLRMFAILCEHTGGKWPFWLSPRQAIVIPVAPQYNEYAKEVQAFFHLKDYAIDIDD 500

Query: 587 RNET-INYKIREHSIKKIPIIIICGDKEASERSIGIR 622
              T +  K+R   +     I + GD EA+ +++ +R
Sbjct: 501 STATQLQKKVRNACVAHYNFIFVVGDSEANHKTVNVR 537


>gi|149027311|gb|EDL82978.1| threonyl-tRNA synthetase, isoform CRA_b [Rattus norvegicus]
          Length = 433

 Score =  320 bits (819), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 169/410 (41%), Positives = 246/410 (60%), Gaps = 18/410 (4%)

Query: 217 LSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIF 276
           L RIYG ++   + L ++  F EE++ RDHRK+ R+ +L+   E   G  F+  KG  I+
Sbjct: 4   LQRIYGISFPDPKLLKEWEKFQEEAKNRDHRKIGRDQELYFFHELSPGSCFFLPKGAYIY 63

Query: 277 QTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFA 335
            TL+ ++R +  K  ++E+ TP + +  LW  SGHW  Y  NMF+ +   +       FA
Sbjct: 64  NTLMEFIRSEYRKRGFQEVVTPNIFNSRLWMTSGHWQHYSENMFSFEVEKEQ------FA 117

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC 395
           LKPMNCPGH  +F+H  +S+RELP+RLA+FG ++RNE SG+L GL RVR F QDDAH+FC
Sbjct: 118 LKPMNCPGHCLMFDHRPRSWRELPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFC 177

Query: 396 TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTI 455
             EQ+ +E     + + ++Y  FGF    + LSTRPEK +G   +W+ AE  ++  L+  
Sbjct: 178 AMEQIEDEIKGCLDFLRTVYSVFGF-SFKLNLSTRPEKFLGDIEIWNQAEKQLENSLNEF 236

Query: 456 KNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH- 514
               +  +N     G+GAFYGPK +  +KDAIGR  QC TIQ+DF LP RFN  YV SH 
Sbjct: 237 GEKWE--LNP----GDGAFYGPKIDIQIKDAIGRYHQCATIQLDFQLPIRFNLTYV-SHD 289

Query: 515 -SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIAN 573
             +K  PV++HRA+ GS+ER I I+ EN+ G  P WLSP Q +V  +  +  EYAQ++  
Sbjct: 290 GDDKKRPVIVHRAILGSVERMIAILTENYGGKWPFWLSPRQVMVVPVGPTCDEYAQKVRQ 349

Query: 574 LLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
                   ++ D     T+N KIR   + +   I++ G+KE +  ++ IR
Sbjct: 350 EFHDAKFMVDIDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKASGTVNIR 399


>gi|71418959|ref|XP_811024.1| threonyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener]
 gi|70875641|gb|EAN89173.1| threonyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 816

 Score =  320 bits (819), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 186/573 (32%), Positives = 299/573 (52%), Gaps = 76/573 (13%)

Query: 1   MPSDIKLTFPDGSIKNFPVHA---TGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG 57
           M + I +T PDG  K  P  +   T  D+A+ +S S A++ +   +N ++ DL+  V EG
Sbjct: 59  MQAPITITLPDG--KQLPATSWLTTPIDIAKRLSNSQAERVIVARVNDELWDLTR-VFEG 115

Query: 58  --SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPF 114
             ++E++  +DP +  V  HS +H++  A++ ++   ++++GP +E+G F+Y+ D  +P 
Sbjct: 116 DATLELLDWDDPEARHVFWHSSSHVLGYALERVF-HTRLSVGPALEEGGFFYEGDTGRPL 174

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES-IPAKENVTL 173
           S  +   IE  MQE++    P+ +  +S   A  LF   +  +K +IL S +P     T+
Sbjct: 175 SETDYKSIEIAMQELVKMKMPYQRLTVSKADALRLFGYTE--FKSKILASKVPENGFCTV 232

Query: 174 YRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQ 233
           YR G   D CRGPH+  TG+VK F  + K + +Y+ G +   +L R+YG ++  Q  LT+
Sbjct: 233 YRCGHLIDPCRGPHLPDTGRVKAF-AVTKNSSSYFEGKAENAVLQRVYGISFPKQTMLTE 291

Query: 234 YLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYE 292
           +     E+ +RDHR + R+  LF   E   G  FW   G +I+  L+ + R++ +   +E
Sbjct: 292 WKALQAEAARRDHRNIGRQQQLFGFHEVSPGSAFWLPHGARIYNALVEFQRKQYRRRGFE 351

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+ +P +    LW  SGHWD Y  NMF +      + +     +KPMNCPGH  ++    
Sbjct: 352 EVVSPNMFSSKLWMVSGHWDKYADNMFRI------VVEKEDHGMKPMNCPGHCIMYAMQQ 405

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
            SY+ELP+R A+FG ++RNE SG+L GL RVR F QDDAH+FC  +Q+  E       + 
Sbjct: 406 HSYKELPIRYADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCRMDQVQEEIRGALVFLD 465

Query: 413 SIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDT------------------ 454
            +Y+  GF K  +K +TRPE ++G++ +WD AE  ++  L++                  
Sbjct: 466 DVYRTLGF-KFFLKHATRPENKLGTEEMWDQAEAYLRAALNSFCGIPEHLPDPFKEGATF 524

Query: 455 ---------------IKNSSQDRINTGVLLGE---------------------GAFYGPK 478
                          +K  + +R N      E                     GAFYGPK
Sbjct: 525 TFDGRRDTVKKLRALLKKQAANRENKDTEKKEEKDDEWKGPTHAEAWEENTGDGAFYGPK 584

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
            + +++DA+ R  QC T+Q+DFNLP RF   Y 
Sbjct: 585 IDIVVEDALRRRHQCATVQLDFNLPQRFGLKYT 617



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 61/108 (56%)

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANL 574
           + +  PVMIHRA+FGS+ER I I+ E++ G  PLWLSP Q IV  +++    YA ++ + 
Sbjct: 679 ANQARPVMIHRAIFGSLERCIAILCEHYGGEWPLWLSPRQVIVIPVSAENTAYATKVRDA 738

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
             +     + D  N T++ KIR   + +   I + G  E   +++ +R
Sbjct: 739 FYADGFHADVDSGNATLDKKIRNAEVARYNFIFVVGQVEEEAQTVNVR 786


>gi|322819645|gb|EFZ26679.1| threonyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 816

 Score =  319 bits (817), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 186/573 (32%), Positives = 299/573 (52%), Gaps = 76/573 (13%)

Query: 1   MPSDIKLTFPDGSIKNFPVHA---TGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG 57
           M + I +T PDG  K  P  +   T  D+A+ +S S A++ +   +N ++ DL+  V EG
Sbjct: 59  MQAPITITLPDG--KQLPATSWLTTPIDIAKRLSNSQAERVIVARVNDELWDLTR-VFEG 115

Query: 58  --SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPF 114
             ++E++  +DP +  V  HS +H++  A++ ++   ++++GP +E+G F+Y+ D  +P 
Sbjct: 116 DATLELLDWDDPEARHVFWHSSSHVLGYALERVF-HTRLSVGPALEEGGFFYEGDTGRPL 174

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES-IPAKENVTL 173
           S  +   IE  MQE++    P+ +  +S   A  LF   +  +K +IL S +P     T+
Sbjct: 175 SETDYKSIEIAMQELVKMKMPYQRLTVSKADALRLFGYTE--FKSKILASKVPENGFCTV 232

Query: 174 YRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQ 233
           YR G   D CRGPH+  TG+VK F  + K + +Y+ G +   +L R+YG ++  Q  LT+
Sbjct: 233 YRCGHLIDPCRGPHLPDTGRVKAF-AVTKNSSSYFEGKAENAVLQRVYGISFPKQTMLTE 291

Query: 234 YLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYE 292
           +     E+ +RDHR + R+  LF   E   G  FW   G +I+  L+ + R++ +   +E
Sbjct: 292 WKALQAEAARRDHRNIGRQQQLFGFHEVSPGSAFWLPHGARIYNALVEFQRKQYRRRGFE 351

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+ +P +    LW  SGHWD Y  NMF +      + +     +KPMNCPGH  ++    
Sbjct: 352 EVVSPNMFSSKLWMVSGHWDKYADNMFRI------VVEKEDHGMKPMNCPGHCIMYAMQQ 405

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
            SY+ELP+R A+FG ++RNE SG+L GL RVR F QDDAH+FC  +Q+  E       + 
Sbjct: 406 HSYKELPIRYADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCRMDQVQEEIRGALVFLD 465

Query: 413 SIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDT------------------ 454
            +Y+  GF K  +K +TRPE ++G++ +WD AE  ++  L++                  
Sbjct: 466 DVYRTLGF-KFFLKHATRPENKLGTEEMWDQAEAYLRAALNSFCGIPEHLPDPFKEGTTF 524

Query: 455 ---------------IKNSSQDRINTGVLLGE---------------------GAFYGPK 478
                          +K  + +R N      E                     GAFYGPK
Sbjct: 525 TFDGRRDSVKKLRALLKKQAANRENKDTDKKEEKDDEWKGPTHAEAWEENTGDGAFYGPK 584

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
            + +++DA+ R  QC T+Q+DFNLP RF   Y 
Sbjct: 585 IDIVVEDALRRRHQCATVQLDFNLPQRFGLKYT 617



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 61/108 (56%)

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANL 574
           + +  PVMIHRA+FGS+ER I I+ E++ G  PLWLSP Q IV  +++    YA ++ + 
Sbjct: 679 ANQARPVMIHRAIFGSLERCIAILCEHYGGEWPLWLSPRQVIVIPVSAENTTYATKVRDA 738

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
             +     + D  N T++ KIR   + +   I + G  E   +++ +R
Sbjct: 739 FYADGFHADVDSGNATLDKKIRNAEVARYNFIFVVGQVEEETQTVNVR 786


>gi|156978155|ref|YP_001449061.1| threonyl-tRNA synthetase [Vibrio harveyi ATCC BAA-1116]
 gi|156529749|gb|ABU74834.1| hypothetical protein VIBHAR_06960 [Vibrio harveyi ATCC BAA-1116]
          Length = 394

 Score =  314 bits (805), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 152/392 (38%), Positives = 236/392 (60%), Gaps = 11/392 (2%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQ 302
           + HR++A ++DLFH      G+IFWH  GW++F+++ S+MR    +  ++E+NTP  + Q
Sbjct: 2   KTHREIAEQLDLFHSEPQAPGMIFWHPNGWRLFESIKSHMRSVYHRSGFQEVNTPVFMKQ 61

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LWQ+SGH D +  NMF     +        + LKPM+CP H+ ++  G+ S+++LP++L
Sbjct: 62  ELWQKSGHIDMFSENMFFGGNQEQQ----SGYVLKPMSCPAHILLYKRGVHSHKDLPIKL 117

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG V+RNE SGSL+G +R R FTQDDAHVFC  EQ  +E  +       +Y  +G+E 
Sbjct: 118 FEFGLVHRNESSGSLNGCLRARQFTQDDAHVFCQWEQAEDEVRQFLQRARKVYAAYGYEH 177

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I VK+ST+PEK +G D  W  A++I+      +     ++ +T +  GEGAFYGPK E  
Sbjct: 178 IEVKVSTKPEKALGDDEDWIRAQDIL------VSACIHEKFHTELQDGEGAFYGPKIELS 231

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D++GR WQCGTIQ DFNL  RF+  + +       PV++H+A++GS+ER+IGI++E  
Sbjct: 232 LTDSMGRSWQCGTIQFDFNLAKRFDVKFTSEEGTFEAPVIMHQAMYGSVERWIGILLEMS 291

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
           +G+LPLWL P    + ++  S   +A+ +A+ L    +    D    ++  K++    KK
Sbjct: 292 QGDLPLWLHPQPVAIASVNHSNCHFAKIVADRLLDIDIHALLDLSKSSMGRKMKRFHKKK 351

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           IP +I  GD E     + I+     +  +VS+
Sbjct: 352 IPFVISIGDYEVENDVVSIKNRKEASETQVSM 383


>gi|255514109|gb|EET90372.1| threonyl-tRNA synthetase [Candidatus Micrarchaeum acidiphilum
           ARMAN-2]
          Length = 560

 Score =  312 bits (800), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 170/435 (39%), Positives = 249/435 (57%), Gaps = 21/435 (4%)

Query: 218 SRIYGTAWNTQQELTQY--LYFLEESE-----KRDHRKLAREMDLFHIAEDGSGVIFWHR 270
           SR YG A   QQ+  +   L  +++SE     +RDHR +   +DL+   E    +++WH 
Sbjct: 131 SRSYGAATAQQQKRPRKVDLSIVKKSEWTGLPERDHRSIGESLDLYSFQEVSPSMVYWHP 190

Query: 271 KGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
            G  I+Q LI +MR   +  DY+EI+TP + +  LW  SGH D Y+ NMF +   DD   
Sbjct: 191 NGRIIYQQLIEFMRGMERLYDYKEISTPALANIALWHVSGHIDYYKDNMFII---DDGSS 247

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
           +   F LKPMNCP  + ++     SY+ELP R A F  +YR E SG+L GL RV+  TQD
Sbjct: 248 E---FGLKPMNCPSTILIYKSRRWSYKELPFRTAIFDKLYRREVSGALSGLFRVQELTQD 304

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMK 449
           D H+F + E +  E   +  L+  +Y  FG  K   KLST P++ +G + LWD A   +K
Sbjct: 305 DGHIFVSAEGVEKEITLLLELVKRVYGVFGL-KYYAKLSTMPDEHLGDEELWDKATESIK 363

Query: 450 GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAF 509
             L+T  N  +  I       EGAFYGPK ++ ++D+ GR WQC TIQ+D+ LP RF   
Sbjct: 364 RALET--NGMKYEIKEK----EGAFYGPKIDFDIEDSQGRLWQCATIQLDYQLPKRFGIV 417

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQ 569
           Y     ++  PV+IHRA+ GSIERF+GI++E+++G LPLWLSP+QA V +I+     YA+
Sbjct: 418 YTGEDGKEHTPVIIHRAILGSIERFVGILVEHYQGKLPLWLSPVQARVISISEENNSYAE 477

Query: 570 EIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
            +   +K   +  E D  + T+ YKIR   ++KIP I++ G++E  + SI +R       
Sbjct: 478 SVFEKIKLEGIRAEMDGSDHTLEYKIRSAQMQKIPYIVVIGNREREKGSISVRMRSGKQE 537

Query: 630 QKVSLLDAIPILTKE 644
             + L   +  + KE
Sbjct: 538 NGIKLEPLLESIKKE 552


>gi|89101224|ref|ZP_01174050.1| threonyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
 gi|89084053|gb|EAR63228.1| threonyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
          Length = 408

 Score =  311 bits (798), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 152/405 (37%), Positives = 248/405 (61%), Gaps = 18/405 (4%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEI 294
            LEE+++RDHRK+ +E+DLF  ++  G G+  W  KG  I + +  Y+  ++ +  YE +
Sbjct: 2   LLEEAKERDHRKIGKELDLFMTSQKVGQGLPMWLPKGATIRRIVERYIVDKEQRLGYEHV 61

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
            TP + +  L++ SGHWD Y+ +MF V   D+         L+PMNCP H+ ++ + + S
Sbjct: 62  YTPVMANVELYKTSGHWDHYQEDMFPVMEMDN-----EELVLRPMNCPHHMMIYKNSIHS 116

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YRELP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+  E  ++ +LI+ +
Sbjct: 117 YRELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEEFKRVVHLILEV 176

Query: 415 YKDFGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
           YKDF  E    +LS R     EK    D +W+ A++++K  +D +       ++     G
Sbjct: 177 YKDFNIEDYSFRLSYRDPQDTEKYFNDDEMWEKAQSMLKEAMDELG------LDYYEAEG 230

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           E AFYGPK + ++K A+G++    T Q+DF LP RF+  YV    ++  PV+IHR V  +
Sbjct: 231 EAAFYGPKLDVMVKTALGKEETLSTAQLDFLLPERFDLSYVGEDGKQHRPVVIHRGVVST 290

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNE 589
           +ERF+  +IE +KG  P WL+P+Q  V  ++  A  +YA+++   L++    +E D RNE
Sbjct: 291 MERFVAFLIEEYKGAFPTWLAPVQVQVIPVSPDAHFDYAKKVQEELQAQGYRVELDARNE 350

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
            I YKIRE  ++KIP +++ GDKE S+ ++ +R++G   ++ +S 
Sbjct: 351 KIGYKIREAQMQKIPYMLVLGDKEVSDNAVNVRKYGEQKSETMSF 395


>gi|162452628|ref|YP_001614995.1| hypothetical protein sce4352 [Sorangium cellulosum 'So ce 56']
 gi|161163210|emb|CAN94515.1| thrS [Sorangium cellulosum 'So ce 56']
          Length = 753

 Score =  310 bits (795), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 155/372 (41%), Positives = 224/372 (60%), Gaps = 15/372 (4%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRK--IKDDYEEINTPQVLDQHLWQQSGHWDSYR 315
           + E G+G++ W  KG  + +T+I    RK  +++ Y+ + +P +    LW+ SGHWD YR
Sbjct: 370 VEEIGAGLVMWLPKG-GLLRTIIEDQWRKMHLEEGYDIVYSPHIAKADLWKTSGHWDFYR 428

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
             MF+    D        +  KPMNCP H+ +     +SYRE P+RLAE G+VYR E +G
Sbjct: 429 EGMFSPMSVDG-----HDYCCKPMNCPFHILMVKSRTRSYREFPMRLAELGTVYRYEAAG 483

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
            +HGLMRVRGFTQDDAH+FC  +Q+  E  ++   I+ + + FGFE+  + LSTRPEK V
Sbjct: 484 VMHGLMRVRGFTQDDAHLFCRADQVEQEIHRVLRFILKMLRTFGFEQFDINLSTRPEKYV 543

Query: 436 GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGT 495
           G    W  AE+ + G L  +       +   V  G GAFYGPK +  L DA+ R WQC T
Sbjct: 544 GGLEDWAKAESTLAGALKALG------LEYTVDPGGGAFYGPKIDIKLVDALDRRWQCST 597

Query: 496 IQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQA 555
           +Q DFN P RF   +VN+  E   P+M+HRA+ GSIERFIG+++E+  G LP WLSP QA
Sbjct: 598 LQYDFNNPERFTLGFVNAKGELEQPIMLHRALLGSIERFIGVLLEHHAGALPAWLSPEQA 657

Query: 556 IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEAS 615
            V T++    ++A+++   L++H +       +E +  KIRE  ++KIP +++ GDKE  
Sbjct: 658 RVVTVSDKHNDHAEQVTQALRAHGIRASFVRSSEKLGAKIREAQVEKIPHMLVIGDKEVE 717

Query: 616 ERSIGIR-RFGS 626
            +   +R R GS
Sbjct: 718 AKGATVRLRDGS 729



 Score =  167 bits (423), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 93/259 (35%), Positives = 153/259 (59%), Gaps = 7/259 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPE 65
           +  PDG +       T  D A +IS  LA+  V   ++G++ DL  P+R+G+ +E++  +
Sbjct: 5   VVLPDGKVLALEDGNTAFDAARAISPRLAEAVVVARVDGEIQDLRVPLRDGAKLELLKAD 64

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFD-KEQPFSSDELAQIE 123
            P     I HS  H+MA AV  ++P  +V +GP    D FYYDFD   + F+  +L  IE
Sbjct: 65  TPEGRDTINHSAEHLMATAVLRLFPGAKVTMGPKNHGDEFYYDFDVAGRTFTPSDLEMIE 124

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFES--KKEAYKVEILESIPAKENVTLYRQGEWFD 181
            +++++I +   F    +  + A   FES  +K  YK EIL  IP ++++++YR GE+ D
Sbjct: 125 AEVKKLIEQKIKFELHSVHKKNALTYFESLGQKNEYKEEILSWIP-EDSISIYRCGEFVD 183

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           +CRGPH+   G +K F K+   + AYWR D+ +  L R+ G A+  + +L +Y+  LEE+
Sbjct: 184 ICRGPHLPHAGFIKGF-KITSSSAAYWRADATKQSLQRVRGVAFPNKDDLDKYVRRLEEA 242

Query: 242 EKRDHRKLAREMDLFHIAE 260
           +KRDHR L R+++L+ ++E
Sbjct: 243 KKRDHRTLGRDLELYLVSE 261


>gi|70607029|ref|YP_255899.1| threonyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
 gi|68567677|gb|AAY80606.1| threonine-tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
          Length = 552

 Score =  310 bits (794), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 159/454 (35%), Positives = 261/454 (57%), Gaps = 20/454 (4%)

Query: 196 KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDL 255
           K+F+++ ++  +    S      R+ G  +  +++L  YL +LE+  + DHR +   +DL
Sbjct: 99  KYFQILSISVHH---PSPEKQYVRVLGVGFEKEEQLKDYLNWLEKVSEYDHRIIGDRLDL 155

Query: 256 FHIAEDGS-GVIFWHRKGWKIFQTLISYMRRKIKDD--YEEINTPQVLDQHLWQQSGHWD 312
           F   E+   GV+ +H  G  I + ++ +M  +I D   Y+E+ T  V    LW+ SGH+D
Sbjct: 156 FSFPEEAPPGVVLFHPNGQIIRKEMMRFME-EINDSMGYKEVYTSHVYRSLLWKISGHYD 214

Query: 313 SYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE 372
            Y+  M   +  +D         +KPMNCP H+ ++   ++SY++LP+R +EFG VYR E
Sbjct: 215 YYKDKMLLFEIDND-----EELGIKPMNCPAHILIYKSKVRSYKDLPIRFSEFGHVYRWE 269

Query: 373 PSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF--EKIMVKLSTR 430
             G L+GL+RVRGFTQDD H+F  ++Q+ +E   +    + +   FGF  + + V LSTR
Sbjct: 270 KKGELYGLLRVRGFTQDDGHIFLREDQIKDEIKLLMKKTLDVLAIFGFKGDDVRVNLSTR 329

Query: 431 PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRD 490
           P++ +G+D  W+ A + +   L+ +       I   V   EGAFYGPK ++ ++D++ R 
Sbjct: 330 PDESIGTDEQWNKATDALISALNELN------IKYEVKEKEGAFYGPKIDFDIRDSLSRW 383

Query: 491 WQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL 550
           WQ  TIQVDFNLP RF   YV+    K  PVM+HRA++GSI+RF+ I++E+F+G LP WL
Sbjct: 384 WQLSTIQVDFNLPERFKLEYVDKDGSKKRPVMVHRAIYGSIDRFMAILLEHFRGKLPTWL 443

Query: 551 SPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           SPIQ  V  IT    +Y   +   L+ + + ++ D   ET++ +I++     +P +II G
Sbjct: 444 SPIQVRVLPITDEIEDYGNSLMAKLRENKIRVDMDSGEETLSKRIKKAYDDGVPYLIIVG 503

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            KE  E  + +R  G+   + +++   +  L +E
Sbjct: 504 RKEKDEGKVTVRARGNIEIRGINVEKFVQALVEE 537


>gi|326936120|ref|XP_003214106.1| PREDICTED: threonyl-tRNA synthetase, mitochondrial-like, partial
           [Meleagris gallopavo]
          Length = 550

 Score =  310 bits (793), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 181/549 (32%), Positives = 279/549 (50%), Gaps = 39/549 (7%)

Query: 76  SCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQIEKKMQEIIARDS 134
           S A I+  AV+  +    +      EDGF+ D    ++     EL  +E           
Sbjct: 5   SSAFILGAAVEQFYGAT-ICSTVATEDGFFCDAHMGDRTVQRSELPVLEDACMAFAHSQH 63

Query: 135 PFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQV 194
           PF +   + E+  ELF  K  +++++ +E        T+YR G    LCRGP +  TG +
Sbjct: 64  PFERLEATREELLELF--KHNSFQLQRIEEEVTSPMATVYRCGPLLQLCRGPLLPHTGLI 121

Query: 195 KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMD 254
               +++  + A+W+G S R  L RI   A+ + QEL  +    + +  RDHR++ +E +
Sbjct: 122 GAL-RVLTSSAAFWQGPSGRLSLQRIAAIAFPSTQELEAWQQDQDAAALRDHRRIGKEQE 180

Query: 255 LFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDS 313
           LF       G  F+  +G  I+ TLI ++R + +   + E+ TP +    LW+ SGHW  
Sbjct: 181 LFFFHALSPGSCFFLPRGAHIYNTLIDFIRSEYQARGFSEVVTPNIFSPRLWELSGHWQH 240

Query: 314 YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP 373
           Y A+MF+     +T+      +LKPMNCP H  +F H  +S+RELP+RLA+FG ++RNEP
Sbjct: 241 YSAHMFSFTAGTETL------SLKPMNCPAHCLMFAHRPRSWRELPLRLADFGVLHRNEP 294

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
            GSL GL RVR F QDDAH+FC  EQ+  E     + + SIY   GF    + L+TRP+ 
Sbjct: 295 PGSLTGLTRVRRFQQDDAHIFCALEQLEAEIGACLDFVRSIYATLGF-SFQMALATRPDG 353

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
            +G  A WD AE  ++  L       +      +  G+GAFYGPK +  ++DA+GR  QC
Sbjct: 354 FLGDAATWDRAEQQLEKSLQDFGEPWE------LSQGDGAFYGPKIDIRIQDALGRHHQC 407

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI 553
           GTIQ+DF +P RF   Y ++      PV+IHRAV GS+ER + +M E+  G    W + +
Sbjct: 408 GTIQLDFQMPERFGLEYASAAGGTARPVLIHRAVLGSVERMVAVMAESCGGK---WGTSV 464

Query: 554 QAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
            A++      A                 ++ D    T+  KIR   +      ++ G +E
Sbjct: 465 HAMLRRDGVMA----------------DLDAD-AGATLGRKIRRAQLTHYNFQLVVGRRE 507

Query: 614 ASERSIGIR 622
               ++ +R
Sbjct: 508 QEHGTVSVR 516


>gi|76363445|sp|Q4J9C4|SYT_SULAC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
          Length = 549

 Score =  309 bits (792), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 159/454 (35%), Positives = 261/454 (57%), Gaps = 20/454 (4%)

Query: 196 KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDL 255
           K+F+++ ++  +    S      R+ G  +  +++L  YL +LE+  + DHR +   +DL
Sbjct: 96  KYFQILSISVHH---PSPEKQYVRVLGVGFEKEEQLKDYLNWLEKVSEYDHRIIGDRLDL 152

Query: 256 FHIAEDGS-GVIFWHRKGWKIFQTLISYMRRKIKDD--YEEINTPQVLDQHLWQQSGHWD 312
           F   E+   GV+ +H  G  I + ++ +M  +I D   Y+E+ T  V    LW+ SGH+D
Sbjct: 153 FSFPEEAPPGVVLFHPNGQIIRKEMMRFME-EINDSMGYKEVYTSHVYRSLLWKISGHYD 211

Query: 313 SYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE 372
            Y+  M   +  +D         +KPMNCP H+ ++   ++SY++LP+R +EFG VYR E
Sbjct: 212 YYKDKMLLFEIDND-----EELGIKPMNCPAHILIYKSKVRSYKDLPIRFSEFGHVYRWE 266

Query: 373 PSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF--EKIMVKLSTR 430
             G L+GL+RVRGFTQDD H+F  ++Q+ +E   +    + +   FGF  + + V LSTR
Sbjct: 267 KKGELYGLLRVRGFTQDDGHIFLREDQIKDEIKLLMKKTLDVLAIFGFKGDDVRVNLSTR 326

Query: 431 PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRD 490
           P++ +G+D  W+ A + +   L+ +       I   V   EGAFYGPK ++ ++D++ R 
Sbjct: 327 PDESIGTDEQWNKATDALISALNELN------IKYEVKEKEGAFYGPKIDFDIRDSLSRW 380

Query: 491 WQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL 550
           WQ  TIQVDFNLP RF   YV+    K  PVM+HRA++GSI+RF+ I++E+F+G LP WL
Sbjct: 381 WQLSTIQVDFNLPERFKLEYVDKDGSKKRPVMVHRAIYGSIDRFMAILLEHFRGKLPTWL 440

Query: 551 SPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           SPIQ  V  IT    +Y   +   L+ + + ++ D   ET++ +I++     +P +II G
Sbjct: 441 SPIQVRVLPITDEIEDYGNSLMAKLRENKIRVDMDSGEETLSKRIKKAYDDGVPYLIIVG 500

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            KE  E  + +R  G+   + +++   +  L +E
Sbjct: 501 RKEKDEGKVTVRARGNIEIRGINVEKFVQALVEE 534


>gi|16553656|dbj|BAB71554.1| unnamed protein product [Homo sapiens]
          Length = 433

 Score =  309 bits (792), Expect = 9e-82,   Method: Compositional matrix adjust.
 Identities = 163/409 (39%), Positives = 241/409 (58%), Gaps = 16/409 (3%)

Query: 217 LSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIF 276
           L RIYG ++   + +  +  F EE++ RDHRK+ +E +LF   +   G  F+  +G  I+
Sbjct: 4   LQRIYGISFPDNKMMRDWEKFQEEAKNRDHRKIGKEQELFFFHDLSPGSCFFLPRGAFIY 63

Query: 277 QTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFA 335
            TL  ++R +  K D+ E+ +P + +  LW+ SGHW  Y  NMF  +   DT      FA
Sbjct: 64  NTLTDFIREEYHKRDFTEVLSPNMYNSKLWEASGHWQHYSENMFTFEIEKDT------FA 117

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC 395
           LKPMNCPGH  +F H  +S+RE+P+R A+FG ++RNE SG+L GL  VR F QDDAH+FC
Sbjct: 118 LKPMNCPGHCLMFAHRPRSWREMPIRCADFGVLHRNELSGTLSGLTGVRRFQQDDAHIFC 177

Query: 396 TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTI 455
           T EQ+  E       + S+Y  FGF    + LSTRPE  +G   +W++AE  ++  L  +
Sbjct: 178 TVEQIEEEIKGCLQFLQSVYSTFGF-SFQLNLSTRPENFLGEIEMWNEAEKQLQNSL--M 234

Query: 456 KNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS 515
                 ++N     G+GAFYGPK +  +KDAIGR  QC TIQ+DF LP RFN  YV+   
Sbjct: 235 DFGEPWKMNP----GDGAFYGPKIDIKIKDAIGRYHQCATIQLDFQLPIRFNLTYVSKDG 290

Query: 516 -EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANL 574
            +K  PV+IHRA+ GS+ER I I+ EN+ G  P WLSP Q +V  +  +  +YA ++++ 
Sbjct: 291 DDKKRPVIIHRAILGSVERMIAILSENYGGKWPFWLSPRQVMVIPVGPTCEKYALQVSSE 350

Query: 575 LKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
                   + D  +  T+N KIR   + +   I++ G+KE  + ++ +R
Sbjct: 351 FFEEGFMADVDLDHSCTLNKKIRNAQLAQYNFILVVGEKEKIDNAVNVR 399


>gi|153839391|ref|ZP_01992058.1| threonyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
 gi|149747086|gb|EDM58074.1| threonyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
          Length = 345

 Score =  309 bits (792), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 149/346 (43%), Positives = 229/346 (66%), Gaps = 11/346 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPE 65
           +T PDGS + F    +  +VA+SI   LAK  +A  +NG   D  D + E  S+EIIT +
Sbjct: 4   ITLPDGSQRQFDNPVSTMEVAQSIGPGLAKATIAGRVNGNRVDACDLIEEDASLEIITVK 63

Query: 66  DP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  A++ ++P+ ++AIGP I++GFYYD D ++  + ++L +IEK
Sbjct: 64  DEVDGLEIVRHSCAHLLGHALKQLYPQAKMAIGPTIDNGFYYDIDLDESLTQEDLEKIEK 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLC 183
           +M+E+       +K+ +S ++AR+ FES+ E YKVEIL E++   +   LY   E+ D+C
Sbjct: 124 RMKELAKTKYEVVKKKVSWQEARDTFESRGEPYKVEILDENVSRDDRPGLYHHEEYIDMC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV + G   + F L+ VAGAYWRG+S+  ML RIYGTA++ ++ L  +L  LEE+ K
Sbjct: 184 RGPHVPNMG-FCQHFTLLNVAGAYWRGNSDNKMLQRIYGTAFHDKKALKAHLTRLEEAAK 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRK+ +++DLFH+ ++  G++FWH  GW IF+ L  ++R K+ + DY+E+  P ++D+
Sbjct: 243 RDHRKIGKQLDLFHMQQEAPGMVFWHHNGWSIFRDLEVFVRDKLNEYDYQEVKGPLMMDR 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
            LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV + 
Sbjct: 303 VLWERSGHWDKYADAMFT------TSSENREYAIKPMNCPGHVQIL 342


>gi|212696507|ref|ZP_03304635.1| hypothetical protein ANHYDRO_01045 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212676492|gb|EEB36099.1| hypothetical protein ANHYDRO_01045 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 390

 Score =  309 bits (791), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 157/394 (39%), Positives = 235/394 (59%), Gaps = 16/394 (4%)

Query: 253 MDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHLWQQSGHW 311
           M+LF   E+  G  F+   G  +   L+++    + ++ Y EI TP ++++ LW +SGHW
Sbjct: 1   MNLFSFHEEAPGFPFFKENGMILRHELLNWWTDVLAENGYGEIQTPLIMNEELWHRSGHW 60

Query: 312 DSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRN 371
           D Y+ NM+  K       D   +A+KPMNCPG V V+     SYR+LP+RLAE+G V+R+
Sbjct: 61  DHYKENMYFTKI------DGENYAVKPMNCPGSVLVYGEEPHSYRDLPIRLAEYGQVHRH 114

Query: 372 EPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP 431
           E SG+LHGL RVR FTQDDAHV+C   Q+ +E  K+ +L   +Y  FGF K  ++LSTRP
Sbjct: 115 ELSGALHGLFRVRTFTQDDAHVYCLPSQVKDEVFKMIDLADLLYSTFGF-KYKIELSTRP 173

Query: 432 EKRVGSDALWDDAENIMKGVLDTIKNSSQD-RINTGVLLGEGAFYGPKFEYILKDAIGRD 490
           +  +G    WD AE   K + D +K    D +IN      +GAFYGPK ++ L+DA  R 
Sbjct: 174 DDFMGKIEEWDFAE---KALEDALKERGIDYQINPK----DGAFYGPKIDFHLEDAAKRT 226

Query: 491 WQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL 550
           WQCGTIQ+DF LP  F+  Y++ + EK  PVM+HRA+ GS+ERFIG + E F G  PLW+
Sbjct: 227 WQCGTIQLDFQLPQNFDLTYIDENGEKKRPVMLHRALLGSVERFIGSVTEQFAGRFPLWI 286

Query: 551 SPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           +P Q  +  ++    ++A ++A  +K     ++ D R+E + YKIR+  + +   +++ G
Sbjct: 287 NPKQVAIIPVSDKFADFADDLAEKIKKAGYRVDVDHRSEGVGYKIRQAQLMRTNYMLVVG 346

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           + E     + +R      T+ VS  + I  L +E
Sbjct: 347 ENEEKSGKLTVRNRDGEETKDVSFEEFIEKLNQE 380


>gi|145529349|ref|XP_001450463.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124418074|emb|CAK83066.1| unnamed protein product [Paramecium tetraurelia]
          Length = 930

 Score =  309 bits (791), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 169/470 (35%), Positives = 269/470 (57%), Gaps = 18/470 (3%)

Query: 47  VCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY 105
           + DL+ P+  +  +E+++ +D     V  HS +HI+  A++ ++    + IGP I+ GF+
Sbjct: 132 IWDLTRPLEGDCQLELLSFDDNNGKEVFWHSSSHILGSALEEVYG-CHLCIGPAIDGGFF 190

Query: 106 YD-FDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES 164
           YD +  +   + ++  +IEK   ++ A    F +  L+ ++  ELF +     ++ I   
Sbjct: 191 YDCYIGDYKVTQNDYVKIEKAASDLAASKQEFQRAVLTKDECLELFGTNPFKRQL-ITNK 249

Query: 165 IPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTA 224
           IP     T Y+ G   DLC GPH+ +T  VK F ++ K + AYW G +    L R+YG +
Sbjct: 250 IPEGAMTTAYKCGNLIDLCTGPHLPNTSYVKAF-QVTKNSAAYWLGKNTNDDLQRVYGVS 308

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR 284
           + +++ L +Y+   +E   RDHR + ++ +L+   +   G  F++  G  I+ TL++++R
Sbjct: 309 FPSKKLLDEYVKIQKELALRDHRNVGKKQNLYLFHQLSPGSAFFYPSGAHIYNTLMNFLR 368

Query: 285 RKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPG 343
           R+     Y+E+ +P + +  LW+ SGH+D Y+ N+F +   ++       + LKPMNCPG
Sbjct: 369 RQYYIRGYQEVISPNIFNAQLWKISGHYDKYKENLFFINMGEEG-----EYGLKPMNCPG 423

Query: 344 HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE 403
           H  +F+    SYR+LPVR A+FG ++RNE  G+L GL RVR F QDDAH+FC  +Q+  E
Sbjct: 424 HCLMFDMIQHSYRDLPVRFADFGVLHRNEVHGALSGLTRVRRFQQDDAHIFCRMDQIQEE 483

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
                + +  IY  FGFE   + LSTRPEK +G+  +WD+AE  ++  L       +   
Sbjct: 484 IKSCLDFLSYIYSLFGFE-FKLYLSTRPEKFLGTKEVWDNAEYQLEQGLKKFGKPFE--- 539

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS 513
              V  G+GAFYGPK +  L DA  R+ QCGTIQ+DFNLP RFN  Y  S
Sbjct: 540 ---VNPGDGAFYGPKIDVKLYDAYKREHQCGTIQLDFNLPERFNLQYRAS 586



 Score = 74.3 bits (181), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 71/131 (54%), Gaps = 5/131 (3%)

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH 579
           PV++HRA+ GS+ER I ++ E   G  P WLSP Q ++  +++   + A++IA  L+   
Sbjct: 718 PVIVHRAILGSLERMIAVLTEQCGGKWPFWLSPKQLVLCPVSAYYKDVAEKIAARLRLEG 777

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
            ++ TD  ++T+  K+R   I+    + + G++E     I +R     T  ++  L  IP
Sbjct: 778 YTVTTDEADQTLAKKVRNAQIQYFNFVGVIGEEEVKAGVIDVRDCEKNT--RIGKL-TIP 834

Query: 640 ILTK--ESLPP 648
            L K  ESL P
Sbjct: 835 QLCKFFESLKP 845


>gi|329943296|ref|ZP_08292070.1| threonyl-tRNA synthetase [Chlamydophila psittaci Cal10]
 gi|328814843|gb|EGF84833.1| threonyl-tRNA synthetase [Chlamydophila psittaci Cal10]
          Length = 379

 Score =  307 bits (787), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 161/358 (44%), Positives = 226/358 (63%), Gaps = 15/358 (4%)

Query: 267 FWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD 325
           F+H +G  I+  LI Y +R  +   Y+EI TPQ++++ LW+ SGHW +YR NM+ +K  D
Sbjct: 3   FFHPRGMIIWDALIGYWKRLHQLAGYKEIQTPQLMNRSLWEVSGHWSNYRENMYTLKIDD 62

Query: 326 DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRG 385
           +       +A+KPMNCPG +  +   L SY++ P+R+AE G V+R E SG+L GLMRVR 
Sbjct: 63  ED------YAIKPMNCPGCMLYYKTRLHSYKQFPLRIAEIGHVHRYEVSGALSGLMRVRA 116

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDA 444
           F QDDAHVF T EQ+  E L I +L+  +Y  FG E   ++LSTRPEK  +GSD LW+ A
Sbjct: 117 FHQDDAHVFLTPEQVEEETLNILHLVSELYSTFGLE-YHLELSTRPEKATIGSDELWELA 175

Query: 445 ENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPS 504
              ++  L  I +++   IN G    +GAFYGPK +  +KDAI R WQCGTIQ+D  LP 
Sbjct: 176 TAALERAL--INSNTPFIINPG----DGAFYGPKIDIHVKDAIQRTWQCGTIQLDMFLPE 229

Query: 505 RFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA 564
           RF   Y N+  EK  PVM+HRA+FGSIERF+GI+IE+FKG  PLWLSP    + T+    
Sbjct: 230 RFELEYTNAQGEKSTPVMLHRALFGSIERFLGILIEHFKGRFPLWLSPEHIRLITVADRH 289

Query: 565 VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
              AQ++A   +   L +  D  NE+++ KIR     ++  ++  GD+E  + ++ IR
Sbjct: 290 QPRAQKLATAWQKLGLIVTVDDSNESVSKKIRNAQNMQVNYMVTLGDREIEQNTLAIR 347


>gi|326437267|gb|EGD82837.1| threonyl-tRNA synthetase 1 [Salpingoeca sp. ATCC 50818]
          Length = 604

 Score =  306 bits (785), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 182/545 (33%), Positives = 283/545 (51%), Gaps = 33/545 (6%)

Query: 103 GFYYD--FDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVE 160
           GF+Y+      Q  ++D LAQ+EK M E+        +  ++ E+A ++F          
Sbjct: 8   GFFYEGHLKHGQTVNTDALAQVEKHMHELCRLQHDLQRIDVTPEQALDVFCDNPFKQHFI 67

Query: 161 ILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVK-KFFKLMKVAGAY--WRG------- 210
                  + ++++Y+   + DLC GPH+R+      K   L   + A   W G       
Sbjct: 68  HRAQQQGETSISIYKLASFVDLCEGPHIRNLRPFSSKTIALTSTSQAEFDWSGREEMKPD 127

Query: 211 --DSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFW 268
             D++ P L+R YG  + ++Q    +   +EE EK +H  + + + +F   +   G  F+
Sbjct: 128 NWDTHTP-LTRTYGICFPSKQMFRHWKRDVEEREKYNHSAVGKSLSIFMQHDTSPGAPFF 186

Query: 269 HRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
              G ++   L   +RR+ +   YEE+ TP V  Q LW+ SGHWD YR +M+ V   D+ 
Sbjct: 187 LPHGVRLLHRLTDLIRRQFRIRGYEEVMTPLVFSQKLWETSGHWDHYRDDMYRVMGFDEK 246

Query: 328 IKDLRTF----------ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
                             LKPMNCP H  +F H  +S+ +LP+RL EF +++RNE SG+L
Sbjct: 247 SSGNGGNDDDDDDEYLRGLKPMNCPAHCLIFKHTKRSHHDLPLRLGEFSALHRNEASGAL 306

Query: 378 HGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGS 437
            GL RVR F QDDAH+FCT+EQ+  E     + + ++Y   GF   +   STRP++  G 
Sbjct: 307 AGLTRVRQFHQDDAHIFCTEEQIQQEVAGCLDFVRTVYDACGFTYSLT-FSTRPDEFTGD 365

Query: 438 DALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ 497
            + WD AE  ++  LD         I+  +  G+GAFYGPK +  L+D +GR  Q  TIQ
Sbjct: 366 ISTWDRAEAQLRACLDAAH------IDFDINEGDGAFYGPKIDVYLEDRMGRRHQSATIQ 419

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIV 557
           +DF LP RF+  + ++   +  PV+IHRA+ GS+ER   +++E+ +G+LPLW SP Q  V
Sbjct: 420 LDFQLPQRFDLNFTDAAMMQQRPVIIHRAILGSLERMTAVLLEHTRGHLPLWCSPRQVAV 479

Query: 558 TTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASER 617
            +++S++   A  +   L S  L  ET   + TI  K+R     K   II+ GD+EA   
Sbjct: 480 LSVSSASRAAAAAVHRQLVSDGLHAETFLEDTTIARKVRAAEQLKFNAIIVVGDEEAKTG 539

Query: 618 SIGIR 622
              +R
Sbjct: 540 KFSVR 544


>gi|313665156|ref|YP_004047027.1| threonine--tRNA ligase [Mycoplasma leachii PG50]
 gi|312949904|gb|ADR24500.1| threonine--tRNA ligase [Mycoplasma leachii PG50]
          Length = 639

 Score =  305 bits (780), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 191/652 (29%), Positives = 327/652 (50%), Gaps = 30/652 (4%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           +K+   DGSIK +    +  D++  I     K  +   IN ++ D++  ++ + S+E+IT
Sbjct: 1   MKIKLLDGSIKEYNQEISVKDISLEIG---LKNVIGAKINDQLFDINYLIKNDCSLELIT 57

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVA-IGPIIEDGFYYDFDKEQPFSSDELAQI 122
            +      ++  + A I + A+ ++ P  Q        E  F   FD       D+L  I
Sbjct: 58  NKSKEYDLMLNLTAAFITSYAINNLKPISQAENFYNADEMEFSTTFDTNPRLVLDDLKNI 117

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           +  + +++  +           KA E+  +  + Y  +  +       V +Y   +++ +
Sbjct: 118 QTNINQLLTSNLEIKSHIYDLNKALEILNNDYQKYLAK--QMYEKYHYVKVYSINDFYMV 175

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
                + +   +K    + ++ G+YW  D N  ML R +G    +  EL      LE+  
Sbjct: 176 INNALILNPNFIK-VIDIEQLTGSYWLNDKNNIMLQRAHGLCATSNSELKNKKVILEDRR 234

Query: 243 KRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVL 300
            RDHR + + +++F   +  G+G+  W   G+ +   +  Y+R+K  + DY  + TP + 
Sbjct: 235 SRDHRLINKTLNIFGFDQLVGAGLPLWLPNGFIVKNEIEKYLRQKEWEYDYIPVETPPIG 294

Query: 301 DQHLWQQSGHWDSYRANMF----AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
              L++ SGHWD Y  +MF      K +D+       F L+PMNCP H+AV+    +SYR
Sbjct: 295 TVELYKTSGHWDHYGEDMFQPFNGGKGSDEQ------FILRPMNCPHHIAVYKQEQRSYR 348

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +LP+R+ E    +R E SGSL GL RVRG    D+H+F   +Q+ +E    + LI  + K
Sbjct: 349 DLPLRICEHAIQHRFESSGSLTGLERVRGMKLTDSHIFVRSDQIEDEFRSTYKLISEVLK 408

Query: 417 DFGFEKIMVKLSTR-PEKRVG---SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
            F  +   + LS R P  +V     D +WD AE+ ++ VL  +    + RI      G+ 
Sbjct: 409 TFNIQIDYLSLSLRDPNDKVKFYKDDLMWDKAESSLEKVLIDLGLKYEKRI------GDA 462

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           AFYGPK +  +K A   +    TIQ+DF +P++F+  Y++   +   P+MIHR + G+ E
Sbjct: 463 AFYGPKLDIQIKTAQNHEITVSTIQLDFLMPNKFDLIYIDKDQKLVRPIMIHRGLIGTYE 522

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
           RFI  ++E  KG LPLWL+P Q  +  I+ S +EYA  I   LK   +    D R+E ++
Sbjct: 523 RFIATLLEQTKGVLPLWLAPKQVEIIPISESNLEYANLIHQKLKKEFIRSHIDLRDERLS 582

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           YKIR+   KK+P  ++ G+KE    +I  R++GS     +S+ + + +L ++
Sbjct: 583 YKIRDAQTKKVPYQLVLGNKEVENNTITYRQYGSEKQITISIQEFVDMLKQQ 634


>gi|70952361|ref|XP_745354.1| threonine--tRNA ligase [Plasmodium chabaudi chabaudi]
 gi|56525650|emb|CAH82048.1| threonine--tRNA ligase, putative [Plasmodium chabaudi chabaudi]
          Length = 505

 Score =  304 bits (779), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 174/521 (33%), Positives = 270/521 (51%), Gaps = 84/521 (16%)

Query: 200 LMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIA 259
           ++K +  YW GD N   L R+YG ++  + ELT Y+ F+ E  KRDHR + + ++LF   
Sbjct: 1   VLKNSSPYWLGDKNNDSLQRVYGISFQKKTELTDYIKFIGEG-KRDHRNVGKNLNLFFFE 59

Query: 260 ED---GSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYR 315
           ++   GSG  FW   G  I+  LI +MR++ +   YEE+ TP +    LW+ SGH+ +Y+
Sbjct: 60  KETLPGSG--FWFTHGANIYNKLIEFMRKEYRIRKYEEVITPNIFSCDLWKTSGHYQNYK 117

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
             MF     +      + + +KPMNCPGH  +F     SY+ LP+RLA+FG ++RNE +G
Sbjct: 118 NCMFIFNIEN------KEWGMKPMNCPGHCLIFKQLNASYKSLPIRLADFGVLHRNEITG 171

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
           SL GL RVR F QDDAH+FC+ + +  E + +   I  +Y  FGF K  + LSTRP K +
Sbjct: 172 SLSGLTRVRRFQQDDAHIFCSLDHIKTEVINVLQFIFYVYNLFGF-KYDLYLSTRPPKYI 230

Query: 436 GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGT 495
           G    W+ AE  +K  L+    + + ++N G    +GAFYGPK + +L+D++ R  QCGT
Sbjct: 231 GDINTWNFAEQSLKEALELA--NVKWKLNEG----DGAFYGPKIDIVLRDSLNRTHQCGT 284

Query: 496 IQVD------FNLPSRFNAFYVNSHSEKC------------------------------- 518
           +Q+D      FNL  +   + V   ++                                 
Sbjct: 285 VQLDFQLPIRFNLQYKNKEYGVGQETDSNLVNQSNKDANEKKEDSTMGNAGNNDEQNKLD 344

Query: 519 ------------------HPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTI 560
                              P++IHRA+ GS+ERF+ I++E+  G  P WLSP QAIV  I
Sbjct: 345 GENAGNNQPGGELKKGFDRPIIIHRAILGSVERFVAILVEHTSGKFPFWLSPRQAIVLPI 404

Query: 561 TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
           +    EYA+ I ++L ++   ++ D    T+N KIRE  +K+   I++ G+KE S  ++ 
Sbjct: 405 SDKFNEYAKYIHDVLTNNLFDVDVDISVNTLNKKIREAQLKQYNFILVVGEKELSTNTVT 464

Query: 621 IRRFGSTTTQKVSLLDAIPILTK---------ESLPPDCQK 652
           +R   +   QK ++ + +    K           +PP  QK
Sbjct: 465 VRDRDNPNDQKYTIQELVNNFKKMLDINSVKLNEIPPFIQK 505


>gi|83319726|ref|YP_424209.1| threonyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum
           ATCC 27343]
 gi|83283612|gb|ABC01544.1| threonyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum
           ATCC 27343]
          Length = 639

 Score =  304 bits (779), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 192/652 (29%), Positives = 328/652 (50%), Gaps = 30/652 (4%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           +K+   DGSIK +    +  D++  I     K  +   IN ++ D++  ++ +  +E+IT
Sbjct: 1   MKIKLLDGSIKEYNQEISVKDISLEIG---LKNVIGAKINDQLFDINYLIKNDCDLELIT 57

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAI-GPIIEDGFYYDFDKEQPFSSDELAQI 122
            +      ++  + A I + A+ ++    Q  I     E  F   F+ E     D+L  I
Sbjct: 58  NKSKEYDLMLNLTAAFITSYAINNLKSISQAEIFYNADEMEFSTTFNTEPRLVLDDLKNI 117

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           +  +  ++  +           KA E+  +  + Y  +  +       V +Y   +++ +
Sbjct: 118 QTNINNLLTSNLEIKSNIYDLNKALEILNNDYQKYLAK--QMYEKYHYVKVYSINDFYMV 175

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
                + ++  +K    + ++ G+YW  D N  ML R++G    +  EL      LE+  
Sbjct: 176 VNKALILNSNFIK-IIDIEQLTGSYWLNDKNNIMLQRVHGLCATSSSELKNKKVILEDRR 234

Query: 243 KRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVL 300
            RDHR + + +++F   +  G+G+  W   G+ +   +  Y+R+K  + DY  + TP + 
Sbjct: 235 SRDHRLINKRLNIFGFDQLVGAGLPLWLPNGFIVKNEIEKYLRQKEWEYDYIPVETPPIG 294

Query: 301 DQHLWQQSGHWDSYRANMF----AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
              L++ SGHWD Y  +MF      K +D+       F L+PMNCP H+AV+    +SYR
Sbjct: 295 TVELYKTSGHWDHYGEDMFQPFNGGKGSDEQ------FILRPMNCPHHIAVYKQEQRSYR 348

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +LP+R+ E    +R E SGSL GL RVRG    D+H+F   +Q+ +E    + LI  + K
Sbjct: 349 DLPLRICEHAIQHRFESSGSLTGLERVRGMKLTDSHIFVRSDQIEDEFRSTYKLISEVLK 408

Query: 417 DFGFEKIMVKLSTR-PEKRVG---SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
            F  +   + LS R P  +V     D +WD AE+ ++ VL  +    + RI      G+ 
Sbjct: 409 TFNIQIDYLSLSLRDPNDKVKFYKDDLMWDKAESSLEKVLIDLGLKYEKRI------GDA 462

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           AFYGPK +  +K A   +    TIQ+DF +P++F+  Y++   +   P+MIHR + G+ E
Sbjct: 463 AFYGPKLDIQIKTAQNHEITVSTIQLDFLMPNKFDLTYIDKDQKLVRPIMIHRGLIGTYE 522

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
           RFI  ++E  KG LPLWL+P Q  +  I+ S +EYA  I   LK   +    D R+E ++
Sbjct: 523 RFIATLLEQTKGVLPLWLAPKQVEIIPISESNLEYANLIHQKLKKEFIRSHIDLRDERLS 582

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           YKIR+   KK+P  ++ G+KE    +I  R++GS     VS+ + I +L ++
Sbjct: 583 YKIRDAQTKKVPYQLVLGNKEVENNTITYRQYGSDAQITVSIQEFIDMLKQQ 634


>gi|255066456|ref|ZP_05318311.1| threonine--tRNA ligase [Neisseria sicca ATCC 29256]
 gi|255049336|gb|EET44800.1| threonine--tRNA ligase [Neisseria sicca ATCC 29256]
          Length = 310

 Score =  304 bits (778), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 136/302 (45%), Positives = 211/302 (69%), Gaps = 3/302 (0%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           + +T PDGS++ +    T + +A SI   LAK  VA  +NGK+ D  DP+ E S ++IIT
Sbjct: 2   LNITLPDGSVRQYESPVTVAQIAASIGAGLAKATVAGKVNGKLVDACDPITEDSTVQIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A IE
Sbjct: 62  PKDQEGVEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M+E+IA+D   +K      +  ++F+ + E YK+ ++E +P  E + +Y   E+ D+C
Sbjct: 122 ARMKELIAQDYNVIKIMTPRAETIKIFQDRGEEYKLRLIEDMPEVEAMGMYHHQEYVDMC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +T +  K FKL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+EK
Sbjct: 182 RGPHVPNT-RFLKNFKLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKAYIQRIEEAEK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ ++  G++FWH KGW ++QT+  +MR+++    Y+E+ TPQ++D+
Sbjct: 241 RDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQTIEQHMRKELNAAGYKEVKTPQIMDK 300

Query: 303 HL 304
           +L
Sbjct: 301 NL 302


>gi|329577159|gb|EGG58629.1| threonine--tRNA ligase [Enterococcus faecalis TX1467]
          Length = 412

 Score =  304 bits (778), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 155/399 (38%), Positives = 238/399 (59%), Gaps = 18/399 (4%)

Query: 239 EESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINT 296
           EE+++RDHRKL +E+DLF ++++ GSG+ FW  KG  I +T+  Y+  ++I   Y+ + T
Sbjct: 3   EEAKERDHRKLGKELDLFMVSQEVGSGLPFWLPKGATIRRTIERYIVDKEISLGYQHVYT 62

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P + D  L++ SGHWD Y  +MF        + D     L+PMNCP H+ V+ + + SYR
Sbjct: 63  PIMADVELYKTSGHWDHYHEDMFPPM----DMGDGEMLVLRPMNCPHHMMVYKNDIHSYR 118

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ELP+R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  +   L++++Y 
Sbjct: 119 ELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVAVYA 178

Query: 417 DFGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
           DF       +LS R     +K    DA+W+ A+ ++K  +D ++      ++     GE 
Sbjct: 179 DFNITDYRFRLSYRDPNNTDKYFDDDAMWEKAQAMLKAAMDELE------LDYFEAEGEA 232

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH-PVMIHRAVFGSI 531
           AFYGPK +  +K A+G +    TIQ+DF LP RF+  YV    E  H PV+IHR +  ++
Sbjct: 233 AFYGPKLDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTM 292

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNET 590
           ERF+  + E +KG  P WL+PIQA +  ++  A  EYA EI   L++  L +E D RNE 
Sbjct: 293 ERFVAYLTEVYKGAFPTWLAPIQATIIPVSVEAHSEYAYEIKERLQAQGLRVEVDDRNEK 352

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           + YKIR    +K+P  ++ GDKE  + ++ +RR+GS  T
Sbjct: 353 MGYKIRASQTQKVPYQLVVGDKEMEDATVNVRRYGSKET 391


>gi|42560810|ref|NP_975261.1| threonine-tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str.
           PG1]
 gi|42492306|emb|CAE76903.1| threonine-tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str.
           PG1]
 gi|301321098|gb|ADK69741.1| threonine--tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str.
           Gladysdale]
          Length = 639

 Score =  303 bits (776), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 192/652 (29%), Positives = 326/652 (50%), Gaps = 30/652 (4%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           +K+   DGSIK +    +  D++  I     K  +   IN ++ D++  ++ + S+E+IT
Sbjct: 1   MKIKLLDGSIKEYNQEISVKDISLEIG---LKNVIGAKINDQLFDINYLIKNDCSLELIT 57

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVA-IGPIIEDGFYYDFDKEQPFSSDELAQI 122
            +      ++  + A I + A+ ++ P  Q        E  F   FD       D+L  I
Sbjct: 58  NKSKEYDLMLNLTAAFITSYAINNLKPISQAENFYNADEMEFSTTFDTNPRLVLDDLKNI 117

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           +  + +++  +           KA E+  +  + Y  E  +       V +Y   +++ +
Sbjct: 118 QTNINQLLTSNLEIKFHIYDLNKALEILNNDYQKYLAE--QMYEKYHYVKVYSINDFYMV 175

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
                + +   VK    + ++ G+YW  D N  ML R++G    +  EL      LE+  
Sbjct: 176 INNALILNPNFVK-VIDVEQLTGSYWLNDKNNIMLQRVHGLCATSNSELKNKKVILEDRR 234

Query: 243 KRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVL 300
            RDHR + + +++F   +  G+G+  W   G+ +   +  Y+R+K  + DY  + TP + 
Sbjct: 235 SRDHRLINKTLNIFGFDQLVGAGLPLWLPNGFIVKNEIEKYLRQKEWEYDYIPVETPPIG 294

Query: 301 DQHLWQQSGHWDSYRANMF----AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
              L++ SGHWD Y  +MF      K +D+       F L+PMNCP H+AV+    +SYR
Sbjct: 295 TVELYKTSGHWDHYGEDMFQPFNGGKGSDEQ------FILRPMNCPHHIAVYKQEQRSYR 348

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +LP+R+ E    +R E SGSL GL RVRG    D+H+F   +Q+ +E    + LI  +  
Sbjct: 349 DLPLRICEHAIQHRFESSGSLTGLERVRGMKLTDSHIFVRSDQIEDEFRSTYKLISEVLN 408

Query: 417 DFGFEKIMVKLSTR-PEKRVG---SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
            F  +   + LS R P  +V     D +WD AE+ ++ VL  +    + RI      G+ 
Sbjct: 409 TFNIQIDYLSLSLRDPNDKVKFYKDDLMWDKAESSLEKVLIDLGLKYEKRI------GDA 462

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           AFYGPK +  +K A   +    TIQ+DF +P++F+  Y++   +   P+MIHR + G+ E
Sbjct: 463 AFYGPKLDIQIKTAQNHEITVSTIQLDFLMPNKFDLTYIDKDQKLVRPIMIHRGLIGTYE 522

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
           RFI  ++E  KG LPLWL P Q  +  I+ S +EYA  I   LK   +    D R+E ++
Sbjct: 523 RFIATLLEQTKGVLPLWLVPKQVEIIPISESNLEYANLIHQKLKKEFIRSHIDLRDERLS 582

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           YKIR+   KK+P  ++ G+KE    +I  R++GS     +S+ + + +L ++
Sbjct: 583 YKIRDAQTKKVPYQLVLGNKEVENNTITYRQYGSEKQITISIQEFVDMLKQQ 634


>gi|331703296|ref|YP_004399983.1| Threonine tRNA ligase [Mycoplasma mycoides subsp. capri LC str.
           95010]
 gi|328801851|emb|CBW54004.1| Threonine tRNA ligase [Mycoplasma mycoides subsp. capri LC str.
           95010]
          Length = 639

 Score =  301 bits (771), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 190/652 (29%), Positives = 326/652 (50%), Gaps = 30/652 (4%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           +K+   DGSIK +    +  D++  I     K  +   IN ++ D++  +++   +E+IT
Sbjct: 1   MKIKLLDGSIKEYNQEISVKDISSEIG---LKNVIGAKINDQLFDINYLIKDDCDLELIT 57

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVA-IGPIIEDGFYYDFDKEQPFSSDELAQI 122
            +      ++  + A I + A+ ++    Q        E  F   F+ E     D+L  I
Sbjct: 58  NKSKEYDLMLNLTAAFITSYAINNLKSINQAENFYNADEMEFSTTFNTEPRLVLDDLKNI 117

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           +  +  ++  +           KA E+  +  + Y  +  +       V +Y   +++ +
Sbjct: 118 QTNINNLLTSNLEIKSNIYDLNKALEILNNDYQKYLAK--QMYEKYHYVKVYSINDFYMV 175

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
                + ++  +K    + ++ G+YW  D N  ML R++G    +  EL      LE+  
Sbjct: 176 VNKALILNSNFIK-IIDIEQLTGSYWLNDKNNIMLQRVHGLCATSSSELKNKKVILEDRR 234

Query: 243 KRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVL 300
            RDHR + + +++F   +  G+G+  W   G+ +   +  Y+R+K  + DY  + TP + 
Sbjct: 235 SRDHRLINKTLNIFGFDQLVGAGLPLWLPNGFIVKNEIEKYLRQKEWEYDYIPVETPPIG 294

Query: 301 DQHLWQQSGHWDSYRANMF----AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
              L++ SGHWD Y  +MF      K +D+       F L+PMNCP H+AV+    +SYR
Sbjct: 295 TVELYKTSGHWDHYGEDMFQPFNGGKGSDEQ------FILRPMNCPHHIAVYKQEQRSYR 348

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +LP+R+ E    +R E SGSL GL RVRG    D+H+F   +Q+ +E    + LI  + K
Sbjct: 349 DLPLRICEHAIQHRFESSGSLTGLERVRGMKLTDSHIFVRSDQIEDEFRSTYKLISEVLK 408

Query: 417 DFGFEKIMVKLSTR-PEKRVG---SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
            F  +   + LS R P  +V     D +WD AE+ ++ VL  +    + RI      G+ 
Sbjct: 409 TFNIQIDYLSLSLRDPNDKVKFYKDDLMWDKAESSLEKVLIDLGLKYEKRI------GDA 462

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           AFYGPK +  +K A   +    TIQ+DF +P++F+  Y++   +   P+MIHR + G+ E
Sbjct: 463 AFYGPKLDIQIKTAQNHEITVSTIQLDFLMPNKFDLTYIDKDQKLVRPIMIHRGLIGTYE 522

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
           RFI  ++E  KG LPLWL+P Q  +  I+ S +EYA  I   LK   +    D R+E ++
Sbjct: 523 RFIATLLEQTKGVLPLWLAPKQVEIIPISESNLEYANLIHQKLKKEFIRSHIDLRDERLS 582

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           YKIR+   KK+P  ++ G+KE    +I  R++GS     V + + I +L ++
Sbjct: 583 YKIRDAQTKKVPYQLVLGNKEVENNTITYRQYGSDAQITVPIQEFIDMLKQQ 634


>gi|330802268|ref|XP_003289141.1| hypothetical protein DICPUDRAFT_35169 [Dictyostelium purpureum]
 gi|325080808|gb|EGC34348.1| hypothetical protein DICPUDRAFT_35169 [Dictyostelium purpureum]
          Length = 679

 Score =  301 bits (770), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 206/659 (31%), Positives = 344/659 (52%), Gaps = 48/659 (7%)

Query: 6   KLTFPDGSIKNFPV-HATGSDVAESISRSLAKKAVAVAIN-GKVCDLSDPV--REGSIEI 61
           K+   DG I +F   + T  D+ + I +S  K  +   +N  ++ +L +P+   + +IE 
Sbjct: 32  KVRLNDGRILDFDQDNITPQDIIKKIGKSNFKHTLTSRVNSNQLVNLKEPIELNDFNIEF 91

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEV-QVAIGPIIEDGFYYD--FDKEQ-PFSSD 117
           +  ED        ++ + ++A A++  +    + ++  +++  F+ D  F K       +
Sbjct: 92  LDFEDLEVRKAFWNTSSLVLAAAIKEHYKNTTEFSVDSVLQGSFFVDVYFSKSSMTIKEE 151

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN---VTLY 174
           ++ +I+K M+  I ++    K  +  +KA+ LF          IL++    EN     + 
Sbjct: 152 DIKRIKKIMEHFIKQNEAIQKFAIPQDKAKLLF-----CTNPAILKTFTEGENKDVQVID 206

Query: 175 RQGEWFDLCRGPHVRSTGQVKKF--FKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELT 232
             G +F L +   +    +++     K   V G     D +   L RI G ++  + ++ 
Sbjct: 207 LNGHYF-LEKFKPLEPIAKIQSLDLIKNSSVVG----DDPSYTKLQRIVGISFPEKAQMK 261

Query: 233 QYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DY 291
            +    +++  RDHR + +  +LF       G  F+   G KI+  L++++R + +   Y
Sbjct: 262 NWEDLSKKASLRDHRLIGKNQELFFFHPFSPGSCFFLPHGTKIYNKLLNFLRSEYRRRGY 321

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           +E+ TP +  Q LW+QSGHW +Y+ NMF+ +C      D   ++LKPMNCPGH  +F H 
Sbjct: 322 QEVITPNIYSQKLWEQSGHWQNYKDNMFSFEC------DHTHYSLKPMNCPGHCLMFAHR 375

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI 411
            +SY+ELP+R+A+FG ++RNE  GSL GL RVR F QDDAH+FCT + +  E  +  + +
Sbjct: 376 QRSYKELPMRIADFGVLHRNESHGSLTGLTRVRRFQQDDAHIFCTPDMIREEIAQCLDFM 435

Query: 412 ISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
             +Y  F F    ++LSTRP+  +G   +WD AEN +  VL T    +Q +IN      +
Sbjct: 436 KFVYSVFNF-TFHLELSTRPDSFLGDIEVWDKAENALSQVL-TEFCGNQWKINP----KD 489

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV--------NSHSEKCHPVMI 523
           GAFYGPK +  LKDA G+  QC TIQ+DF LP RFN  Y         N  S    PVMI
Sbjct: 490 GAFYGPKIDIHLKDANGKSHQCATIQLDFQLPIRFNLEYNDGKKEETENQQSAVNRPVMI 549

Query: 524 HRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKS--HHLS 581
           HRA+FGS+ER + I++E+  G  P WLSP Q IV +++ +   +A EI + L      + 
Sbjct: 550 HRALFGSVERMMAILMEHTGGKWPFWLSPRQCIVVSVSKAFNNHALEIQSKLNQSMVDID 609

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT--TQKVSLLDAI 638
           ++ D  +  I  K+ E +  +   II+ G +E+    + +R   S +   +K+S+ D +
Sbjct: 610 VDVDISDNLIAKKVFEATHLQYNYIIVIGQEESDSGILSVRERDSKSKENRKLSIDDLL 668


>gi|256384406|gb|ACU78976.1| threonine--tRNA ligase [Mycoplasma mycoides subsp. capri str. GM12]
 gi|256385238|gb|ACU79807.1| threonine--tRNA ligase [Mycoplasma mycoides subsp. capri str. GM12]
 gi|296455488|gb|ADH21723.1| threonine--tRNA ligase [synthetic Mycoplasma mycoides JCVI-syn1.0]
          Length = 639

 Score =  300 bits (767), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 193/653 (29%), Positives = 327/653 (50%), Gaps = 32/653 (4%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           +K+   DGSIK +    +  D++  I     K  +   IN ++ D++  ++ +  +E+IT
Sbjct: 1   MKIKLLDGSIKEYNQEISIKDISSEIG---LKNVIGAKINDQLFDINYLIKNDCDLELIT 57

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVA-IGPIIEDGFYYDFDKEQPFSSDELAQI 122
            +      ++  + A I + A+ S     Q        E  F   FD E     D+L  I
Sbjct: 58  NKSKEYDLMLNLTAAFITSYAINSFKSISQAENFYNADEMEFSTTFDTEPRLVLDDLKNI 117

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWFD 181
           +  +  ++  +           KA E+  +    Y+  + + +  K N V +Y   +++ 
Sbjct: 118 QTNINNLLTSNLEIKSNIYDLNKALEILNND---YQKHLAKQMYEKYNYVKVYSINDFYM 174

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           +     + ++  +K    + ++ G+YW  D N  ML R++G    +  EL      LE+ 
Sbjct: 175 VIDKALILNSNFIK-IIDIEQLTGSYWLNDKNNIMLQRVHGLCATSSSELKNKKVILEDR 233

Query: 242 EKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQV 299
             RDHR + + +++F   +  G+G+  W   G+ +   +  Y+R+K  + DY  + TP +
Sbjct: 234 RSRDHRLINKTLNIFGFDQLVGAGLPLWLPNGFIVKNEIEKYLRQKEWEYDYIPVETPPI 293

Query: 300 LDQHLWQQSGHWDSYRANMF----AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
               L++ SGHWD Y  +MF      K +D+       F L+PMNCP H+AV+    +SY
Sbjct: 294 GTVELYKTSGHWDHYGEDMFQPFNGGKGSDEQ------FILRPMNCPHHIAVYKQEQRSY 347

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           R+LP+R+ E    +R E SGSL GL RVRG    D+H+F   +Q+ +E    + LI  + 
Sbjct: 348 RDLPLRICEHAIQHRFESSGSLTGLERVRGMKLTDSHIFVRSDQIEDEFRSTYKLISEVL 407

Query: 416 KDFGFEKIMVKLSTR-PEKRVG---SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
           K F  +   + LS R P  +V     D +WD AE+ ++ VL  +    + RI      G+
Sbjct: 408 KTFNIQIDYLSLSLRDPNDKVKFYKDDLMWDKAESSLEKVLIDLGLKYEKRI------GD 461

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
            AFYGPK +  +K A   +    TIQ+DF +P++F+  Y++   +   P+MIHR + G+ 
Sbjct: 462 AAFYGPKLDIQIKTAQNHEITVSTIQLDFLMPNKFDLTYIDKDQKLVRPIMIHRGLIGTY 521

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           ERFI  ++E  KG L LWL+P Q  +  I+ S +EYA  I   LK   +    D R+E +
Sbjct: 522 ERFIATLLEQTKGVLSLWLAPKQVEIIPISESNLEYANLIHQKLKKEFIRSHIDLRDERL 581

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +YKIR+   KK+P  ++ G+KE    +I  R++GS     V + + I +L ++
Sbjct: 582 SYKIRDAQTKKVPYQLVLGNKEVENNTITYRQYGSDAQITVPIQEFIDMLKQQ 634


>gi|328351896|emb|CCA38295.1| threonyl-tRNA synthetase [Pichia pastoris CBS 7435]
          Length = 454

 Score =  299 bits (765), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 159/411 (38%), Positives = 238/411 (57%), Gaps = 24/411 (5%)

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQV 299
           S   ++  +A +  L+ I  +  G +F+   G ++F  L+ +M+ ++ K  ++E+ TP +
Sbjct: 34  SSATNNMSIALKQQLYMIDSNSPGSVFFLPHGTRLFNKLVQFMKIQQKKHGFDEVITPLI 93

Query: 300 LDQHLWQQSGHWDSYRANMFAVK---CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
             + LW+ SGHWD+Y+ +M+ V+    +    KD  TF LKPMNCPGH  ++    +S  
Sbjct: 94  YKKKLWEISGHWDNYKEDMYRVEGNEVSHGDAKDEETFGLKPMNCPGHCLIYKRFDRSIN 153

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ELP+R +++ S++RNE SG+L GL RVR F QDD H+FCT+EQ+  E +K  +LI  +Y 
Sbjct: 154 ELPIRYSDWSSLHRNEASGALTGLTRVRRFHQDDGHIFCTQEQISAEIMKTLHLIKLVYG 213

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
            FG     + LSTRP+  VG+   W+ AE  +K VLD +  SS       +  G+GAFYG
Sbjct: 214 VFGLSDYTLMLSTRPDNYVGTLEEWNSAETQLKSVLDQVAPSSW-----SIREGDGAFYG 268

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK + + +D   R+ Q GTIQ+DF LP RF   Y     +   P+MIHRAVFGSIERF+ 
Sbjct: 269 PKIDILSRDNYSREHQIGTIQLDFQLPHRFELKYRPHEGDFKPPIMIHRAVFGSIERFMA 328

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLK-------------SHHLSIE 583
           ++I++++G  P W++P QA++  I SS V  A E+ +LL              +H   I+
Sbjct: 329 LLIDHYQGKWPFWMNPRQAVIIPINSSHVGKANEVRDLLSGRSNDYETLDDLVNHQFDID 388

Query: 584 TDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS--TTTQKV 632
            D R ET+ Y+ R+   K    II+ GDKE     I +R   S   TT+ V
Sbjct: 389 IDSRAETVGYRTRDALNKSYSYIILVGDKELENNVISLRSRDSRKVTTKTV 439


>gi|254568978|ref|XP_002491599.1| Mitochondrial threonyl-tRNA synthetase [Pichia pastoris GS115]
 gi|238031396|emb|CAY69319.1| Mitochondrial threonyl-tRNA synthetase [Pichia pastoris GS115]
          Length = 461

 Score =  299 bits (765), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 159/411 (38%), Positives = 238/411 (57%), Gaps = 24/411 (5%)

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQV 299
           S   ++  +A +  L+ I  +  G +F+   G ++F  L+ +M+ ++ K  ++E+ TP +
Sbjct: 41  SSATNNMSIALKQQLYMIDSNSPGSVFFLPHGTRLFNKLVQFMKIQQKKHGFDEVITPLI 100

Query: 300 LDQHLWQQSGHWDSYRANMFAVK---CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
             + LW+ SGHWD+Y+ +M+ V+    +    KD  TF LKPMNCPGH  ++    +S  
Sbjct: 101 YKKKLWEISGHWDNYKEDMYRVEGNEVSHGDAKDEETFGLKPMNCPGHCLIYKRFDRSIN 160

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ELP+R +++ S++RNE SG+L GL RVR F QDD H+FCT+EQ+  E +K  +LI  +Y 
Sbjct: 161 ELPIRYSDWSSLHRNEASGALTGLTRVRRFHQDDGHIFCTQEQISAEIMKTLHLIKLVYG 220

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
            FG     + LSTRP+  VG+   W+ AE  +K VLD +  SS       +  G+GAFYG
Sbjct: 221 VFGLSDYTLMLSTRPDNYVGTLEEWNSAETQLKSVLDQVAPSSW-----SIREGDGAFYG 275

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK + + +D   R+ Q GTIQ+DF LP RF   Y     +   P+MIHRAVFGSIERF+ 
Sbjct: 276 PKIDILSRDNYSREHQIGTIQLDFQLPHRFELKYRPHEGDFKPPIMIHRAVFGSIERFMA 335

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLK-------------SHHLSIE 583
           ++I++++G  P W++P QA++  I SS V  A E+ +LL              +H   I+
Sbjct: 336 LLIDHYQGKWPFWMNPRQAVIIPINSSHVGKANEVRDLLSGRSNDYETLDDLVNHQFDID 395

Query: 584 TDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS--TTTQKV 632
            D R ET+ Y+ R+   K    II+ GDKE     I +R   S   TT+ V
Sbjct: 396 IDSRAETVGYRTRDALNKSYSYIILVGDKELENNVISLRSRDSRKVTTKTV 446


>gi|307069528|ref|YP_003878005.1| putative threonyl-tRNA synthetase [Candidatus Zinderia insecticola
           CARI]
 gi|306482788|gb|ADM89659.1| putative threonyl-tRNA synthetase [Candidatus Zinderia insecticola
           CARI]
          Length = 467

 Score =  298 bits (763), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 149/384 (38%), Positives = 242/384 (63%), Gaps = 22/384 (5%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI--KDDYEEINTPQVLDQ 302
           DHR L ++ +LF   +   G+IFW++ G+ I++ +  Y+R  I  K +Y+EI TP +L  
Sbjct: 73  DHRILYKKNNLFFFKKKMPGLIFWNKNGYIIWKNINKYIRNNIYIKYNYKEIKTPIILRD 132

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
           + W+++ HW+ Y+ NMF +K  +      + +ALKPMNCPGH+ ++N+   SY++LP++ 
Sbjct: 133 YFWKKTKHWNYYKKNMFLLKTKN------KKYALKPMNCPGHIQIYNYKKISYKKLPLKY 186

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            E G  +RNE +GSLHG++R++ F QDD H+FC K Q+  E +K +N+   +YK+F F+ 
Sbjct: 187 GEIGECFRNEYTGSLHGILRLKNFNQDDGHIFCKKNQILLELIKFNNICKKVYKNFNFKN 246

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVL----DTIKNSSQDRINTGVLLGEGAFYGPK 478
           I +KLS RP+K++G++ LW+ +E I+  ++      IKN  ++          GAFYGPK
Sbjct: 247 IKIKLSLRPKKKIGNNYLWNLSEKILLKIILFFNIKIKNIEKN----------GAFYGPK 296

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            EY LKD   + WQCGTIQ+DF +    N  Y N ++ K + +++HRA+ GSIERFIGI+
Sbjct: 297 IEYYLKDLNKKIWQCGTIQIDFIISKILNLNYNNKYNIKKNIIILHRAILGSIERFIGIL 356

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IEN KG +P +L PIQ ++  I +  ++Y   I  +LK +   I+    N  ++ K++++
Sbjct: 357 IENNKGYIPFYLIPIQIVIININNKILKYTNNIIKILKKNKFRIKKIINNNNLSLKLKKY 416

Query: 599 SIKKIPIIIICGDKEASERSIGIR 622
              K    I+ G+KE  ++SI ++
Sbjct: 417 FSYKSYFCILIGNKENKKKSIFLK 440


>gi|71899804|ref|ZP_00681954.1| TGS [Xylella fastidiosa Ann-1]
 gi|71730395|gb|EAO32476.1| TGS [Xylella fastidiosa Ann-1]
          Length = 332

 Score =  298 bits (762), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 146/336 (43%), Positives = 220/336 (65%), Gaps = 11/336 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAING-KVCDLSDPVREGSI-EII 62
           I +T PDGS + F    +   VA +I   LAK  +A  I+G  + D SD +   +I  II
Sbjct: 2   ITITLPDGSRREFEGPVSVMQVAHAIGPGLAKATIAGQIDGGHLVDASDLIEHDAILRII 61

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TPED  +L +IRHSCAH++  AV+ ++PE ++ IGP+I DGFYYD   ++PF+ ++LA I
Sbjct: 62  TPEDQEALEIIRHSCAHLVGHAVKQLYPEAKMVIGPVIADGFYYDIYSKRPFTPEDLAAI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESI-PAKENVTLYRQGEWFD 181
           E++M E+IA+D   +K   +      LF+ + E YK+ ++E + P    + +Y   E+ D
Sbjct: 122 EQRMVELIAQDYDVVKHITARHDVVRLFKERGEDYKLRLIEDMGPEVTAMGIYHHQEYVD 181

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           +CRGPHV +T +  K F+L +++GAYWRGD+    L RIYGTAW  +++L  Y+  L+++
Sbjct: 182 MCRGPHVPNT-RFLKAFRLTRISGAYWRGDTKNEQLQRIYGTAWADKKQLEAYMQRLQDA 240

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVL 300
           EKRDHRK+ +  DLFH+ E+G G++FWH KGW I+QT+ +Y+RR  ++  Y E+  PQ+L
Sbjct: 241 EKRDHRKIGKAQDLFHLQEEGPGLVFWHPKGWVIWQTIENYIRRVYRNSGYGELRCPQIL 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFAL 336
           D  LWQ+SGHWD+Y+ NMF       T  + RT+A+
Sbjct: 301 DVSLWQKSGHWDNYKENMFF------TDSEKRTYAV 330


>gi|27262218|gb|AAN87390.1| Threonyl-tRNA synthetase [Heliobacillus mobilis]
          Length = 311

 Score =  295 bits (754), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 145/307 (47%), Positives = 201/307 (65%), Gaps = 9/307 (2%)

Query: 339 MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE 398
           MNCPG + V+ + + SYR+LP+R+AE G V+R+E SG+LHGLMRVR FTQDDAH+F    
Sbjct: 1   MNCPGSMLVYKNSIHSYRDLPLRMAELGLVHRHEISGALHGLMRVRCFTQDDAHIFMLPS 60

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNS 458
           Q+  E + + +L+   YK FGF+   ++LST+PEK +GSD +W+ A + ++   D +K+ 
Sbjct: 61  QIKEEIMGVIDLVDRFYKTFGFD-YHIELSTKPEKAMGSDEIWELATSSLE---DALKSK 116

Query: 459 SQD-RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK 517
             D +IN G    +GAFYGPK ++ LKD +GR WQCGTIQ+DF +P RF+  YV    +K
Sbjct: 117 GMDYKINPG----DGAFYGPKIDFHLKDCLGRTWQCGTIQLDFQMPERFDLTYVGEDGQK 172

Query: 518 CHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKS 577
             PVMIHR VFGSIERFIGI+ E+F G  P WL+P+Q  V  IT     YAQ++   L  
Sbjct: 173 HRPVMIHRVVFGSIERFIGILTEHFAGAFPAWLAPVQVRVLPITDRHHAYAQKVLAHLAE 232

Query: 578 HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
             +  E D RNE I YKIRE  +KKIP +++ GDKEA   ++ +R++G        L + 
Sbjct: 233 RGIRAEVDDRNEKIGYKIREGQVKKIPYLLVVGDKEAENGAVAVRKYGEGDKGACGLDEF 292

Query: 638 IPILTKE 644
             +L +E
Sbjct: 293 TKMLIEE 299


>gi|224613500|gb|ACN60329.1| Threonyl-tRNA synthetase, cytoplasmic [Salmo salar]
          Length = 383

 Score =  294 bits (753), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 153/365 (41%), Positives = 212/365 (58%), Gaps = 15/365 (4%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK 322
           G  F+  KG  I+ TL  +++ + +   + E+ TP +    LW++SGHW+ Y  NMF V 
Sbjct: 4   GSCFFLPKGAHIYNTLADFIKTEYRRRGFHEVVTPTLYSTALWERSGHWEHYSENMFTV- 62

Query: 323 CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMR 382
                  D  T+ALKPMNCP H  +F   ++S+RELP+R A+FG+++RNE SG+L GL R
Sbjct: 63  -----TGDTHTYALKPMNCPAHCLMFEQRVRSWRELPLRWADFGALHRNELSGALGGLTR 117

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWD 442
           VR F QDDAH+FCT EQ+  E +   + + S+Y+ FGF      LSTRP   +G  ALWD
Sbjct: 118 VRRFCQDDAHIFCTPEQLEEEIMACLDFVRSVYRVFGF-SFHCLLSTRPTPCLGEHALWD 176

Query: 443 DAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNL 502
            AE  ++  L       Q  +N G    +GAFYGPK +  +KDAIGR  QC TIQ+DF L
Sbjct: 177 HAEQQLERSLQQFGERWQ--LNPG----DGAFYGPKIDIQIKDAIGRQHQCATIQLDFQL 230

Query: 503 PSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITS 562
           P RF+  YV    E   PVM+HRAV GS+ER I I+ ENF G  PLWLSP Q I+  +  
Sbjct: 231 PIRFDLQYVGGDGETHRPVMVHRAVLGSLERMIAILAENFGGKWPLWLSPAQVIIIPVGG 290

Query: 563 SAVEYAQEIANLLKSHHLSIET-DFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
            +  YAQ++    +      +  D +  T+N KIR   + +   I + G+KE    ++ +
Sbjct: 291 GSETYAQQVVRQFREAGFMADVDDDQGATLNKKIRSAQLAQYNYIFVVGEKECESGTVSV 350

Query: 622 RRFGS 626
           R  G 
Sbjct: 351 RTRGG 355


>gi|153839390|ref|ZP_01992057.1| threonyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
 gi|149747085|gb|EDM58073.1| threonyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
          Length = 287

 Score =  294 bits (753), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 137/283 (48%), Positives = 186/283 (65%), Gaps = 6/283 (2%)

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AEFGS +RNEPSG+LHG+MRVRGFTQDDAH+FCT+ Q+  E      ++   Y+ FGF+
Sbjct: 1   MAEFGSCHRNEPSGALHGIMRVRGFTQDDAHIFCTESQIQEEVTSCIKMVYDTYQTFGFD 60

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            I+VKLSTRPEKRVGSD +WD +E  +K  L++++      I   +  GEGAFYGPK E+
Sbjct: 61  NIVVKLSTRPEKRVGSDEIWDQSEEALKQSLESME------IPYEIQEGEGAFYGPKIEF 114

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L D + R WQCGT+Q+DFNLP R  A YV  ++E+  PVMIHRA+ GS+ERFIGI+IE 
Sbjct: 115 TLYDCLDRAWQCGTVQLDFNLPGRLGATYVGENNERLVPVMIHRAILGSLERFIGILIEE 174

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  P WL+P QA++  IT     Y QEI   L+   +  + D RNE I +KIREH++K
Sbjct: 175 YAGFFPTWLAPEQAVLMNITDKQSGYVQEIVQKLQKSGIRAKADLRNEKIGFKIREHTLK 234

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           ++P +++ GD+E     I +R        K  + D I  +  E
Sbjct: 235 RVPYMLVVGDQEMEAGEIAVRTRKGKDLGKFKVDDFIAYIQDE 277


>gi|313247748|emb|CBY15872.1| unnamed protein product [Oikopleura dioica]
          Length = 538

 Score =  293 bits (749), Expect = 9e-77,   Method: Compositional matrix adjust.
 Identities = 163/452 (36%), Positives = 260/452 (57%), Gaps = 24/452 (5%)

Query: 43  INGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE 101
           I+ K  DL+  +  + SIE++   D        HS AHI+ E ++  +    +  GP IE
Sbjct: 103 ISEKFWDLTRKLEGDCSIELLKFSDKEGKETYWHSSAHILGECMERYFGGA-LCYGPDIE 161

Query: 102 DGFYYDFDKEQPFSSDE--LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKV 159
           DGFYYD        S E  + ++EK   +++    PF +  ++ ++  ++F  K   +K 
Sbjct: 162 DGFYYDMWMGNTTISSEADMPKLEKLYYQMMKEKQPFQRLNVTKQQLIDMF--KHNPFKQ 219

Query: 160 EILESIPAKENV---TLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPM 216
            ++    A++N+   T+Y+ G   D+CRGPH+  TG+ K   KL K +  YW G +++  
Sbjct: 220 RLI----AEKNIGDTTVYKCGNLIDMCRGPHLPHTGKAKAC-KLYKTSATYWEGKADQES 274

Query: 217 LSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIF 276
           L R+YG  +  +++LT+++ F EE++KRDHR++  + +L+      +G  FW  +G  I+
Sbjct: 275 LQRVYGITFPDKKQLTEWVNFQEEAKKRDHRRIGTQQELWTFDPVSAGSCFWLPRGAVIY 334

Query: 277 QTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFA 335
             L  ++R +  K  ++E+ TP + +  LW+ SGHW  Y  +MF  K  DD       +A
Sbjct: 335 NRLQDFIRSEYRKRGFKEVVTPNIFNSELWKTSGHWQHYEDDMFTFKVEDDK------WA 388

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC 395
           +KPMNCPGH  +F   L+SY+ELP+R A+FG ++RNE SG+L GL RVR F QDDAH+FC
Sbjct: 389 MKPMNCPGHCVMFGSRLRSYKELPLRFADFGVLHRNELSGALSGLTRVRRFQQDDAHIFC 448

Query: 396 TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTI 455
            +EQ+  E     +    +Y  FGF    + LSTRPEK +G  A WD+AE ++K  L+T 
Sbjct: 449 AREQIEGEITAALDFFKFVYDTFGF-TFELNLSTRPEKYLGEVADWDEAEGMLKNALNTF 507

Query: 456 KNSSQDRINTGVLLGEGAFYGPKFEYILKDAI 487
            ++++ +       G+GAFYGPK +  + DA+
Sbjct: 508 CSTNETKWELNP--GDGAFYGPKIDIKILDAL 537


>gi|50543472|ref|XP_499902.1| YALI0A09427p [Yarrowia lipolytica]
 gi|49645767|emb|CAG83829.1| YALI0A09427p [Yarrowia lipolytica]
          Length = 461

 Score =  292 bits (748), Expect = 9e-77,   Method: Compositional matrix adjust.
 Identities = 155/413 (37%), Positives = 239/413 (57%), Gaps = 19/413 (4%)

Query: 247 RKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLW 305
           + ++    L+ I+ +  G  F+   G +I+  L  +MR +++   ++EI++P +    LW
Sbjct: 48  KSISDRQQLYWISPESPGSAFFLPHGQRIYSRLGEFMRLQLRVFGFQEISSPIMYKNSLW 107

Query: 306 QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEF 365
           +QSGHW+ ++ +MF V+   +       F+LKPMNCPGH  +FN   +SYRELP+R ++F
Sbjct: 108 KQSGHWEKFQDDMFRVQPGHEETSVEEEFSLKPMNCPGHCLLFNSLKRSYRELPLRYSDF 167

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
             ++RNE SG+L GL RVR F QDD H+FCT EQ+ +E  +   L+   Y  FG E   V
Sbjct: 168 SPLHRNEASGALSGLTRVRRFHQDDGHIFCTPEQVESEISRALKLVQQTYNTFGLEISRV 227

Query: 426 KLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD-RINTGVLLGEGAFYGPKFEYILK 484
            LSTRPE  +G    W+DAE  +  VLD+   S     +N     G+GAFYGPK + ++K
Sbjct: 228 VLSTRPETFIGDIEQWNDAEKALTSVLDSWSVSKGKWELNA----GDGAFYGPKIDILVK 283

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D  G++ Q  T Q+DF LP RF   Y ++      PVM+HRAV+GS+ERF+ I+I++++G
Sbjct: 284 DKHGKEHQTATTQLDFQLPERFQLKYFDASETAQRPVMVHRAVYGSLERFLAILIDHYEG 343

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLL--------KSHHLSIET-----DFRNETI 591
             PLWLSP Q +V  +  +  E+A+++A  L        +S  LS  T     D R+ET+
Sbjct: 344 KWPLWLSPRQCMVLPVGEAQNEFAEKVAAQLSGLPSITDQSTPLSASTLFCDVDTRSETL 403

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
             KI++   +    I + GDKE  E  + +++ G    Q +++ +A     KE
Sbjct: 404 GQKIKQARNEGYSYIAVIGDKEMQEGKVTVQKPGKKDRQLLTVDEARDFFHKE 456


>gi|26553728|ref|NP_757662.1| threonyl-tRNA synthetase [Mycoplasma penetrans HF-2]
 gi|26453735|dbj|BAC44066.1| threonyl-tRNA synthetase [Mycoplasma penetrans HF-2]
          Length = 566

 Score =  292 bits (747), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 181/585 (30%), Positives = 312/585 (53%), Gaps = 38/585 (6%)

Query: 73  IRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIA 131
           + ++ A I  +AVQ I  +  ++A   ++E GF+ +F   Q  SS + ++IEK+M+++I+
Sbjct: 7   LNNTAAQIAFKAVQRILKDDFEIASSGMLEYGFFIEFKTSQSISSKDFSKIEKEMKKVIS 66

Query: 132 RDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN--VTLYRQGEWFDLCRGPHVR 189
                     S EK  E+    K    +   + +  +EN   T  + G+ F+      + 
Sbjct: 67  ----------SGEKIEEI----KSLNSINKYQKVFKEENKESTFIKIGKDFENVSAFEIE 112

Query: 190 STGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKL 249
                 K FKL  + G+YW+ +++   L+RI G A+ T++EL ++  ++EE + RDHRK+
Sbjct: 113 DNVNKVKIFKLTNIGGSYWQNNASLDQLTRISGVAFTTKEELEEWDKYMEEIKSRDHRKI 172

Query: 250 AREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQ 307
            ++M++F  + D G G+  W   G  I + +  ++     K+ +  I+TP +  + L+ +
Sbjct: 173 GQDMEIFDFSNDIGQGLPIWLPNGEIIKKEIKKFLWSIFSKEKFLFIDTPILGSKELYIK 232

Query: 308 SGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGS 367
           SGHW+ Y+ N F     D+      TF L+PM CP H+  FN    SY+ELP  + E   
Sbjct: 233 SGHWEHYKENNFPPMEVDN-----ETFMLRPMTCPHHLTYFNLKPHSYKELPYAICEDSK 287

Query: 368 VYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKL 427
           ++R E SG L GL RVR     D H+    +Q+ +   +++N++  ++K    +   V L
Sbjct: 288 LHRYESSGGLIGLERVRTMELFDCHIITKPDQIEDVIRQLNNILKIVHKRMNIKIDRVDL 347

Query: 428 STR-PEKRV---GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           S R P+ +V     D +W  +E  ++ +L  +   + +      + GE AFYGPK ++ +
Sbjct: 348 SLRDPKDKVKYHDDDKMWKSSEKQLRDILKKLNYKAME------IEGEAAFYGPKIDFQV 401

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           K  +G+     TIQ+DF LP RF+  Y++ ++ K  PV+IH  V G+ ERFI  ++   K
Sbjct: 402 KTNLGKIITISTIQLDFLLPERFDVEYIDENNTKKRPVLIHFGVIGTYERFIATLLSQTK 461

Query: 544 GNLPLWLSPIQ-AIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
           G LP WL+P+Q +I+    +  ++Y ++IA+ L+ +++ ++ D  NE +  KIRE  I K
Sbjct: 462 GLLPFWLAPVQISIIPVNNNIHLDYCKKIASELEENNIRVKLDDSNERLAKKIREAQISK 521

Query: 603 IPIIIICGDKEASERSIGIRRF---GSTTTQKVSLLDAIPILTKE 644
           IP  ++ GD E     I  R++    STT +    +D I  L KE
Sbjct: 522 IPFQLVIGDNEIKNNEITYRKYSEENSTTLKFNEFIDFIKKLKKE 566


>gi|49168658|emb|CAE02700.1| putative threonyl tRNA synthase [Yarrowia lipolytica]
          Length = 461

 Score =  291 bits (746), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 155/413 (37%), Positives = 239/413 (57%), Gaps = 19/413 (4%)

Query: 247 RKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLW 305
           + ++    L+ I+ +  G  F+   G +I+  L  +MR +++   ++EI++P +    LW
Sbjct: 48  KSISDRQQLYWISPESPGSAFFLPHGQRIYSRLGEFMRLQLRVFGFQEISSPIMYKNSLW 107

Query: 306 QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEF 365
           +QSGHW+ ++ +MF V+   +       F+LKPMNCPGH  +FN   +SYRELP+R ++F
Sbjct: 108 KQSGHWEKFQDDMFRVQPGHEETSVEEEFSLKPMNCPGHCLLFNSLKRSYRELPLRYSDF 167

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
             ++RNE SG+L GL RVR F QDD H+FCT EQ+ +E  +   L+   Y  FG E   V
Sbjct: 168 SPLHRNEASGALIGLTRVRRFHQDDGHIFCTPEQVESEISRALKLVQQTYNTFGLEISRV 227

Query: 426 KLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD-RINTGVLLGEGAFYGPKFEYILK 484
            LSTRPE  +G    W+DAE  +  VLD+   S     +N     G+GAFYGPK + ++K
Sbjct: 228 VLSTRPETFIGDIEQWNDAEKALTSVLDSWSVSKGKWELNA----GDGAFYGPKIDILVK 283

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D  G++ Q  T Q+DF LP RF   Y ++      PVM+HRAV+GS+ERF+ I+I++++G
Sbjct: 284 DKHGKEHQTATTQLDFQLPERFQLKYFDASETAQRPVMVHRAVYGSLERFLAILIDHYEG 343

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLL--------KSHHLSIET-----DFRNETI 591
             PLWLSP Q +V  +  +  E+A+++A  L        +S  LS  T     D R+ET+
Sbjct: 344 KWPLWLSPRQCMVLPVGEAQNEFAEKVAAQLSGLPSITDQSTPLSASTLFCDVDTRSETL 403

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
             KI++   +    I + GDKE  E  + +++ G    Q +++ +A     KE
Sbjct: 404 GQKIKQARNEGYSYIAVIGDKEMQEGKVTVQKPGKKDRQLLTVDEARDFFHKE 456


>gi|167465772|ref|ZP_02330861.1| threonine-tRNA ligase [Paenibacillus larvae subsp. larvae
           BRL-230010]
          Length = 419

 Score =  291 bits (746), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 148/399 (37%), Positives = 235/399 (58%), Gaps = 17/399 (4%)

Query: 233 QYLYFLEESEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYM-RRKIKDD 290
           ++L+ LEE++KRDHRKL +++ +F  + E G G+  W   G  I +TL  Y+   + K  
Sbjct: 2   EHLHLLEEAKKRDHRKLGKDLKIFSFSREVGQGLPLWLPNGATIRRTLERYIVDLEEKLG 61

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH 350
           Y+ + TP + +  L++ SGHW+ YR +MF     D+         L+PMNCP H+ V+ +
Sbjct: 62  YQHVYTPVLANVDLYKTSGHWEHYREDMFPPMQLDN-----EELVLRPMNCPHHMMVYKN 116

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
            L SYR+LP+R+AE G+++R E SG+L GL RVR  T +DAH+FC  +Q+  E  ++  L
Sbjct: 117 ELHSYRDLPIRIAELGTMHRYEMSGALTGLHRVRAMTLNDAHIFCRPDQIKEEFARVITL 176

Query: 411 IISIYKDFGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           I  +Y DFG      +LS R     +K   +D +W+ ++ ++K V++ +      R+   
Sbjct: 177 IRQVYADFGITDYRFRLSYRDPQDTDKYFPNDEMWEMSQRMLKEVVEEL------RLPYY 230

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
              GE AFYGPK +  +K A+ ++    T Q+DF LP RF   YV    +K  PV+IHR 
Sbjct: 231 EAEGEAAFYGPKLDVQIKTALKKEETLSTAQLDFLLPERFELEYVGEDGQKHRPVVIHRG 290

Query: 527 VFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF 586
           +  ++ER    ++ENF G LP WL P+QA +  ++S+  +YA+E+ + LK   + +  D 
Sbjct: 291 IVSTMERMTAFLLENFAGALPTWLCPVQAKILPVSSAFNDYAKEMEDRLKQAGIRVAADL 350

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
           RNE + YKIRE  ++K+P +++ G+ E    S  +RR G
Sbjct: 351 RNEKLGYKIRESQLEKVPFMLVVGENEKQSGSFSVRRRG 389


>gi|66821029|ref|XP_644046.1| threonyl-tRNA synthetase [Dictyostelium discoideum AX4]
 gi|75016778|sp|Q8MP20|SYTC2_DICDI RecName: Full=Probable threonyl-tRNA synthetase 2, cytoplasmic;
           AltName: Full=Threonine--tRNA ligase; Short=ThrRS
 gi|21240667|gb|AAM44378.1| hypothetical protein [Dictyostelium discoideum]
 gi|60472212|gb|EAL70165.1| threonyl-tRNA synthetase [Dictyostelium discoideum AX4]
          Length = 698

 Score =  291 bits (745), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 200/662 (30%), Positives = 330/662 (49%), Gaps = 87/662 (13%)

Query: 11  DGSIKNFPVHATGSDVAESISRSLAKKAVAVAING-KVCDLSDPV----REGSIEIITPE 65
           DG I  F    T   +A  I++++ K+++   +NG K+  + + +    ++ +IE +  E
Sbjct: 46  DGRIFKFEDKQTPLTIANKINKTIGKQSILSRLNGNKLISMKEIIEMSGKDYNIEFLNFE 105

Query: 66  ---DPR-------SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-----FYYDF-- 108
              D R       SL + R +  +   E  +         + P   D      FY D   
Sbjct: 106 EHSDARICFWNSSSLVLARATMEYFKNENKEIELINFGHLVNPQTADNINQGTFYIDIFF 165

Query: 109 -DKEQPFSSDELAQIEKKMQEIIARDSPF--LKQYLSHEKA---RELFESKKEAYKVEIL 162
            DK Q    +++ +I+K M+ I+ R+  F  LK     +         +  +  +K   L
Sbjct: 166 KDKNQTIKDNDINKIKKIMEYIVKRNDKFEILKNDQQDQDQDQEESFIKFGEFKFKNNFL 225

Query: 163 ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYG 222
               +   V+L       DL +   V   G  K++                   L RI G
Sbjct: 226 TIDSSNSIVSL-------DLIKNSSV--VGPNKEY-----------------SELQRIVG 259

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISY 282
            ++ ++ ++  ++   + +  RDHR + ++ +LF       G  F+   G KI+  L+ +
Sbjct: 260 ISFPSKDQMNNWVEIQKIAALRDHRVIGKDQELFFFHPFSPGSCFFLPHGTKIYNKLLQF 319

Query: 283 MRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           +R +  K  Y+E+ +P + +Q LW+ SGHWD+Y+ NMF+ +C      D   ++LKPMNC
Sbjct: 320 LRLEYRKRGYQEVISPNIYNQKLWETSGHWDNYKDNMFSFEC------DHTQYSLKPMNC 373

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
           PGH  ++ H  +SY+ELP+R+A+FG ++RNE  GSL GL RVR F QDDAH+FCT + + 
Sbjct: 374 PGHCLMYAHRARSYKELPMRIADFGVLHRNETHGSLSGLTRVRRFQQDDAHIFCTPDMIR 433

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E  +  + +  +Y  F F    ++LSTRP+  +G  ++W+ AE  +  VL T     + 
Sbjct: 434 EEIKQCLDFMKYVYTIFNF-TFHLELSTRPDSYLGELSVWEKAETSLSQVL-TEFCGDKW 491

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS-------- 513
            IN     G+GAFYGPK +  LKDA G++ QC TIQ+DF LP RFN  Y           
Sbjct: 492 TINH----GDGAFYGPKIDIHLKDANGKNHQCATIQLDFQLPIRFNLEYSGGLNNNNNNN 547

Query: 514 -----------HSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITS 562
                      ++    PVMIHRA+FGS+ER + I++E+  G  P WLSP Q IV  +++
Sbjct: 548 NNNEEINDNNNNNSLNRPVMIHRALFGSVERMMAILMEHTAGKWPFWLSPRQCIVIPVSN 607

Query: 563 SAVEYAQEIANLLKSHHLSIETDFRN-ETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
              ++AQEI + +      ++ D  + + ++ KIRE ++ +   II+ G +E     + +
Sbjct: 608 KFNQFAQEIQSKINLAGYDVDVDLNDSKLLSKKIREATVSQYNYIIVVGQEEIDTNILNV 667

Query: 622 RR 623
           R+
Sbjct: 668 RK 669


>gi|224129118|ref|XP_002320505.1| predicted protein [Populus trichocarpa]
 gi|222861278|gb|EEE98820.1| predicted protein [Populus trichocarpa]
          Length = 322

 Score =  291 bits (744), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 140/305 (45%), Positives = 199/305 (65%), Gaps = 7/305 (2%)

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
           + L+PMNCP H+ ++   L SYR+ P+R+AE G+VYR E SGSLHGL RVRGFTQDDAH+
Sbjct: 12  YQLRPMNCPYHILLYKRKLNSYRDFPIRVAELGTVYRYELSGSLHGLFRVRGFTQDDAHI 71

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
           FC ++Q+ +E   + +L   I   FGF +  V LSTRPEK VG D +W+ A + ++  LD
Sbjct: 72  FCLEDQIKDEIRGVLDLTEEILLQFGFRRYEVNLSTRPEKSVGDDDIWEKATSALRDALD 131

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS 513
               S Q      +  G GAFYGPK +  ++DA+GR WQC TIQVDFNLP RF+  YV+S
Sbjct: 132 DKGWSFQ------IDEGGGAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDVTYVDS 185

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIAN 573
           ++EK  P+MIHRAV GS+ERF G++IE++ G+ PLWLSP+Q  +  +T + +EY +E+ +
Sbjct: 186 NTEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPVQVRILPVTDTQLEYCKEVIS 245

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            LK + +  E   + E +   IR    +KIP++ + G KEA  +++ IR   S     + 
Sbjct: 246 KLKGNGIRAEV-CQGERLPKLIRNAEKQKIPLMAVVGPKEAETQTVTIRSRFSGEVGTIE 304

Query: 634 LLDAI 638
           + D I
Sbjct: 305 IDDFI 309


>gi|260775804|ref|ZP_05884700.1| threonyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
 gi|260608220|gb|EEX34389.1| threonyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
          Length = 392

 Score =  290 bits (743), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 141/381 (37%), Positives = 231/381 (60%), Gaps = 17/381 (4%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           +HRK+ +++ LF I+E  SG++ W+ KG ++++ + +Y+R   K   Y E+ +P + +  
Sbjct: 4   EHRKIGKQLKLFDISESVSGMVDWYPKGHELYRKVQAYIRSVQKRYGYHEVRSPVLANHS 63

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           +W  SGH + Y  NMF V             ++KPM+CP H+++FN  + SYRELP R+A
Sbjct: 64  VWTTSGHNEKYGENMFHVP--------EHNLSVKPMSCPFHISMFNELVSSYRELPYRIA 115

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK- 422
           EFG  +RNE SGSL+GL R+R F QDD H+FC ++Q+ +E      ++  +Y+ FGF + 
Sbjct: 116 EFGLCHRNESSGSLNGLFRLRAFNQDDGHIFCQEQQIKDELKHFCAMLFEMYEHFGFSRK 175

Query: 423 -IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            I VK+S RP+ ++GSD LW  +E  ++  LD +       I   +L GEGAFYG K E+
Sbjct: 176 DISVKISLRPKNKIGSDELWSRSELYLQEGLDELG------IGYELLPGEGAFYGAKVEF 229

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            LKD++ R WQCGT Q+DF L  +F++ ++N   +  +PV++HRA  GS+ERFI I++E+
Sbjct: 230 SLKDSLDRHWQCGTFQLDFFLSEKFDSSFINELGDSEYPVVLHRAALGSLERFIAILLEH 289

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +KG LP+  +P   ++  +T     Y  E+   L +  ++   D  + ++ Y++R+    
Sbjct: 290 YKGRLPVQFNPYAVVLVPLTVEHQAYCHELQEQLGAMGIACIIDDSDNSVGYRVRQSYKM 349

Query: 602 KIPIIIICGDKEASERSIGIR 622
           K   +I+ GD E     +G++
Sbjct: 350 KCNYLIVIGDDELKSDVLGLK 370


>gi|221122393|ref|XP_002164939.1| PREDICTED: similar to threonyl-tRNA synthetase, partial [Hydra
           magnipapillata]
          Length = 801

 Score =  290 bits (743), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 159/403 (39%), Positives = 233/403 (57%), Gaps = 15/403 (3%)

Query: 3   SDIKLTFPDGS-IKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS--I 59
           S IK+   DG  I      +T   +A+ IS+ LA  AV   +NG++ DL D V EG   I
Sbjct: 77  SPIKIVLLDGKEIDGLAWQSTPYHIAQGISQGLADNAVIAKVNGELWDL-DRVLEGDCKI 135

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           E +  E      V  HS AHI+ EA++  +    +  GP IE+GFYYD   E+  S+ + 
Sbjct: 136 EFLKFEQTEGQQVFWHSSAHILGEAMERHYGGC-LCYGPPIEEGFYYDMWTEKLVSTHDF 194

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             +E  ++ +I    PF +  +  E   ++FE  +  +K+ I+         T+YR G  
Sbjct: 195 GNLETLIKNVIKDKQPFERLEMKKEDLLKMFEYNE--FKLRIINEKITTPTTTVYRCGPL 252

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHVR TG+VK    + K +  YW G+ +   L RIYG ++   + L ++ +F E
Sbjct: 253 IDLCRGPHVRHTGKVKAM-AVTKNSATYWEGNKDAETLQRIYGISFPNDKLLKEWKHFQE 311

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+ KRDHRK+ +E +LF   +   G  F+  KG  I+ TL+S++R +  +  ++E+ TP 
Sbjct: 312 EAAKRDHRKIGKEQELFFFNDLSPGSAFFLPKGAFIYNTLVSFIRSEYNNRGFQEVITPN 371

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW+QSGHW  Y  NMF+ +   +       FALKPMNCPGH  +FN+  +S+REL
Sbjct: 372 MFSTKLWEQSGHWQHYATNMFSFEVEKER------FALKPMNCPGHCVMFNNRPRSWREL 425

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
           P+R A+FG ++RNE SG+L GL RVR F QDDAH+FCT +Q+F
Sbjct: 426 PLRFADFGVLHRNELSGTLTGLTRVRRFQQDDAHIFCTMDQVF 468



 Score =  134 bits (336), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 75/178 (42%), Positives = 98/178 (55%), Gaps = 43/178 (24%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINT 296
           F EE+ KRDHRK+ +                              Y  R     ++E+ T
Sbjct: 474 FQEEAAKRDHRKIGKS----------------------------EYNNR----GFQEVIT 501

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +    LW+QSGHW  Y  NMF+ +   +       FALKPMNCPGH  +FN+  +S+R
Sbjct: 502 PNMFSTKLWEQSGHWQHYATNMFSFEVEKER------FALKPMNCPGHCVMFNNRPRSWR 555

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           ELP+R A+FG ++RNE SG+L GL RVR F QDDAH+FCT +Q  +E LK    IISI
Sbjct: 556 ELPLRFADFGVLHRNELSGTLTGLTRVRRFQQDDAHIFCTMDQ--DEVLK---RIISI 608


>gi|147835150|emb|CAN65675.1| hypothetical protein VITISV_002010 [Vitis vinifera]
          Length = 342

 Score =  289 bits (740), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 151/319 (47%), Positives = 206/319 (64%), Gaps = 17/319 (5%)

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GP V  T   +K  +L  VAGAYWRGD  + ML RIYGTAW  +++L  YL+F EE+++R
Sbjct: 38  GPQV--TLCNRKAVELESVAGAYWRGDEKKQMLQRIYGTAWENEEQLKAYLHFKEEAKRR 95

Query: 245 DHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLI--SYMRRKIKDDYEEINTPQVLD 301
           DHR+L  ++DLF I  E G G++FWH KG  I + +I  S+ +  I+  Y+ + TP V  
Sbjct: 96  DHRRLGIDLDLFSIQDEAGGGLVFWHPKG-AIVRHIIEDSWKKIHIEHGYDLLYTPHVAR 154

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             LW+ SGH D YR NM++    +D +     + L+PMNCP H+ ++   L SYR+ P+R
Sbjct: 155 ADLWKTSGHLDFYRENMYSQITIEDEL-----YQLRPMNCPYHILIYKRKLHSYRDFPIR 209

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AE G+VYR E SGSLHGL RVRGFTQDDAH+FC ++Q+ +E   + +LI  I   FGF 
Sbjct: 210 VAELGTVYRYELSGSLHGLFRVRGFTQDDAHIFCLEDQIKDEIRGVLDLIEEILLQFGFS 269

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
           K  V LSTRPEK VG+D +W+ A + ++  LD    S   RI+     G GAFYGPK + 
Sbjct: 270 KYEVNLSTRPEKAVGADDIWEKATSALRDALDDKGWSY--RIDE----GGGAFYGPKIDL 323

Query: 482 ILKDAIGRDWQCGTIQVDF 500
            ++DA+GR WQC TIQ  +
Sbjct: 324 KIEDALGRKWQCSTIQASY 342


>gi|218506204|ref|ZP_03504082.1| threonyl-tRNA synthetase [Rhizobium etli Brasil 5]
          Length = 213

 Score =  289 bits (740), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 129/184 (70%), Positives = 156/184 (84%)

Query: 389 DDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIM 448
           DDAH+FCT EQM  ECLKI++LI+S+Y+DFGF++I+VKLSTRPEKRVGSDALWD AE +M
Sbjct: 1   DDAHIFCTDEQMAAECLKINDLILSVYEDFGFKEIVVKLSTRPEKRVGSDALWDRAEAVM 60

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
             VL TI+  S+ RI TG+L GEGAFYGPKFEY LKDAIGR+WQCGT QVDFNLP RF A
Sbjct: 61  TDVLKTIEAQSEGRIKTGILPGEGAFYGPKFEYTLKDAIGREWQCGTTQVDFNLPERFGA 120

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYA 568
           FY++S+SEK  PVMIHRA+ GS+ERF+GI+IENF G++PLW+SP+Q +V TITS A  Y 
Sbjct: 121 FYIDSNSEKTQPVMIHRAICGSMERFLGILIENFAGHMPLWVSPLQVVVATITSEADAYG 180

Query: 569 QEIA 572
            E+A
Sbjct: 181 LEVA 184


>gi|147835152|emb|CAN65677.1| hypothetical protein VITISV_002012 [Vitis vinifera]
          Length = 435

 Score =  288 bits (737), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 151/317 (47%), Positives = 205/317 (64%), Gaps = 17/317 (5%)

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GP V  T   +K  +L  VAGAYWRGD  + ML RIYGTAW  +++L  YL+F EE+++R
Sbjct: 39  GPQV--TLCNRKAVELESVAGAYWRGDEKKQMLQRIYGTAWENEEQLKAYLHFKEEAKRR 96

Query: 245 DHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLI--SYMRRKIKDDYEEINTPQVLD 301
           DHR+L  ++DLF I  E G G++FWH KG  I + +I  S+ +  I+  Y+ + TP V  
Sbjct: 97  DHRRLGIDLDLFSIQDEAGGGLVFWHPKG-AIVRHIIEDSWKKIHIEHGYDLLYTPHVAR 155

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             LW+ SGH D YR NM++    +D +     + L+PMNCP H+ ++   L SYR+ P+R
Sbjct: 156 ADLWKTSGHLDFYRENMYSQITIEDEL-----YQLRPMNCPYHILIYKRKLHSYRDFPIR 210

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AE G+VYR E SGSLHGL RVRGFTQDDAH+FC ++Q+ +E   + +LI  I   FGF 
Sbjct: 211 VAELGTVYRYELSGSLHGLFRVRGFTQDDAHIFCLEDQIKDEIRGVLDLIEEILLQFGFS 270

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
           K  V LSTRPEK VG+D +W+ A + ++  LD    S   RI+     G GAFYGPK + 
Sbjct: 271 KYEVNLSTRPEKAVGADDIWEKATSALRDALDDKGWSY--RIDE----GGGAFYGPKIDL 324

Query: 482 ILKDAIGRDWQCGTIQV 498
            ++DA+GR WQC TIQ 
Sbjct: 325 KIEDALGRKWQCSTIQA 341


>gi|213580910|ref|ZP_03362736.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
          Length = 234

 Score =  287 bits (735), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 130/239 (54%), Positives = 177/239 (74%), Gaps = 11/239 (4%)

Query: 173 LYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELT 232
           +Y   E+ D+CRGPHV +  +    FKLMK AGAYWRGDSN  ML RIYGTAW  ++ L 
Sbjct: 1   MYHHEEYVDMCRGPHVPNM-RFCHHFKLMKTAGAYWRGDSNNKMLQRIYGTAWADKKALN 59

Query: 233 QYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DY 291
            YL  LEE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF+ L  ++R K+K+  Y
Sbjct: 60  AYLQRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQY 119

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           +E+  P ++D+ LW+++GHWD+Y+  MF       T  + R + +KPMNCPGHV +FN G
Sbjct: 120 QEVKGPFMMDRVLWEKTGHWDNYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQG 173

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM---FNECLKI 407
           LKSYR+LP+R+AEFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT+EQ+    N C+++
Sbjct: 174 LKSYRDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQIRDEVNACIRM 232


>gi|54309341|ref|YP_130361.1| putative threonyl-tRNA synthetase [Photobacterium profundum SS9]
 gi|46913777|emb|CAG20559.1| putative threonyl-tRNA synthetase [Photobacterium profundum SS9]
          Length = 325

 Score =  287 bits (734), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 137/318 (43%), Positives = 206/318 (64%), Gaps = 4/318 (1%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  DVA  I   LAK  +A  +NG+  D  D +  + S+ IIT +
Sbjct: 4   ITLPDGSQRQFDNAVSTMDVAADIGPGLAKACIAGRVNGERVDACDLIENDASLAIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ ++PE ++AIGP I++GFYYD D EQ  + D++  IEK+
Sbjct: 64  DEDGLEIIRHSCAHLLGHAIKQLYPEAKMAIGPTIDNGFYYDIDLEQSLTQDDVDAIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M+E++      +K+ +S ++AR+ FE++ E YK+EIL E++   +   LY   E+ D+CR
Sbjct: 124 MKELVKTKYAVVKKKVSWQEARDAFEARGETYKIEILDENVSRDDRPGLYHHEEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV + G   + FKL+ VAGAYWRGDS+  ML RIYGTA+  ++ L  +L  LEE+ KR
Sbjct: 184 GPHVPNMG-FCQHFKLLSVAGAYWRGDSDNKMLQRIYGTAFQDKKLLKAHLTRLEEASKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQH 303
           DHR +   +DLFH+  +  G++FWH  GW IF+ L  ++R K+ K +Y+E+  P ++D+ 
Sbjct: 243 DHRTIGEHLDLFHMQHESPGMVFWHHNGWTIFRELQLFIREKLTKYEYQEVKGPLMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAV 321
           LW++S HWD Y   MF  
Sbjct: 303 LWERSSHWDKYAHAMFTT 320


>gi|45190711|ref|NP_984965.1| AER105Wp [Ashbya gossypii ATCC 10895]
 gi|44983690|gb|AAS52789.1| AER105Wp [Ashbya gossypii ATCC 10895]
          Length = 457

 Score =  286 bits (732), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 161/448 (35%), Positives = 248/448 (55%), Gaps = 40/448 (8%)

Query: 217 LSRIYGTAWNTQQELTQYLYFLEESEKRD-----HRKLAREMDLFHIAEDGSGVIFWHRK 271
           L  +    W   ++  Q  Y    S   D      R+++   DL+       G  F+   
Sbjct: 3   LPLVRARPWGGARKSIQKRYVASTSADNDTAAVVAREVSSRQDLYLTDPISPGSTFFLPN 62

Query: 272 GWKIFQTLISYMR--RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
           G K+F  LI +M+  ++ K  ++E+ TP +  + LW+QSGHW++Y+ +MF V+  +D  K
Sbjct: 63  GTKVFNKLIQFMKLQQQNKFGFQEVITPLIYRKSLWEQSGHWENYKDDMFRVE-GNDCAK 121

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
           +   + LKPMNCPGH  +F    +SY ELP+R ++F  ++RNE SG+L GL RVR F QD
Sbjct: 122 E--EYGLKPMNCPGHCVMFKRFDRSYTELPLRFSDFSPLHRNEASGALSGLTRVRKFHQD 179

Query: 390 DAHVFCTKEQMFNE---CLKIHNLIISIYKDFG-----FEKIMVKLSTRPEKRVGSDALW 441
           D H+FCT EQ+  E   CL++ +L        G      E   + LSTRPEK VG   +W
Sbjct: 180 DGHIFCTPEQVEGEIEKCLQLVDLCYGSVLPLGETSDRAELYTMCLSTRPEKYVGELDVW 239

Query: 442 DDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFN 501
           + AE+++K +LD   +  Q  IN G    +GAFYGPK +  +KD  G+  Q  TIQ+DF 
Sbjct: 240 NHAESVLKSILDN--SGKQWSINEG----DGAFYGPKVDIKVKDHTGKYHQVATIQLDFQ 293

Query: 502 LPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT 561
           LP RF+  Y ++ +    P+MIHRAVFGS+ERF+ +++++ KGN P WL+P Q +V  ++
Sbjct: 294 LPERFDMRYKDADNTYKRPIMIHRAVFGSVERFMALLLDSNKGNWPFWLNPHQCMVLPVS 353

Query: 562 SSAVEYAQEIANL----------------LKSHHLSIETDFRNETINYKIREHSIKKIPI 605
           +S  E  Q    L                L S H + E D R+E++ Y++R+   +K   
Sbjct: 354 ASNGEMVQAAKALVDKLCGRDTSSTKPVELNSFHFNAEIDLRDESVGYRLRDAISRKYSY 413

Query: 606 IIICGDKEASERSIGIRRFGSTTTQKVS 633
           I++ G +E ++  + +R   S+  Q +S
Sbjct: 414 IVLIGARELAQNKVAVRSRDSSKIQMMS 441


>gi|209969467|dbj|BAG80638.1| hypothetic protein [Streptococcus parauberis]
          Length = 395

 Score =  286 bits (731), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 148/381 (38%), Positives = 219/381 (57%), Gaps = 16/381 (4%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANM 318
           E G G+ FW   G  I +TL  Y+  K +   Y+ + TP +    L++ SGHW+ Y+ +M
Sbjct: 5   EVGQGLPFWLPNGATIRRTLERYITDKELASGYQHVYTPPMASVELYKTSGHWEHYQEDM 64

Query: 319 FAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLH 378
           F        + D   F L+PMNCP H+ V+ + + SYRELP+R+AE G ++R E SG+L 
Sbjct: 65  FPTM----DMGDGEEFVLRPMNCPHHIQVYKNHVHSYRELPIRIAELGMMHRYEKSGALS 120

Query: 379 GLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR----PEKR 434
           GL RVR  T +D H+F T EQ+  E  +   LII +Y+DF       +LS R      K 
Sbjct: 121 GLQRVREMTLNDGHLFVTPEQIQEEFQRALQLIIDVYEDFNLTDYRFRLSYRDPKDTHKY 180

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
             +D +W++A+ ++K  LD +       ++     GE AFYGPK +  +K A+G +    
Sbjct: 181 YDNDEMWENAQAMLKAALDEMG------VDYFEAEGEAAFYGPKLDIQVKTALGNEETLS 234

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQ 554
           TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF  I+IE +KG  P WL+P Q
Sbjct: 235 TIQLDFLLPERFDLKYIGADGEEHRPVMIHRGVISTMERFTAILIETYKGAFPTWLAPHQ 294

Query: 555 AIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
             V  I++ A ++YA E+A  L+   +  + D RNE + YKIR     KIP  +I GDKE
Sbjct: 295 VTVIPISNEAHIDYAWEVAKTLRDRGIRADVDDRNEKMQYKIRASQTSKIPYQLIVGDKE 354

Query: 614 ASERSIGIRRFGSTTTQKVSL 634
             ++++ +RR+GS  T   S+
Sbjct: 355 MEDKAVNVRRYGSKATHTESI 375


>gi|326926536|ref|XP_003209455.1| PREDICTED: probable threonyl-tRNA synthetase 2, cytoplasmic-like,
           partial [Meleagris gallopavo]
          Length = 635

 Score =  285 bits (730), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 155/399 (38%), Positives = 233/399 (58%), Gaps = 14/399 (3%)

Query: 5   IKLTFPDGSIKNFPV-HATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           IK+T  DG I +      T   +A  IS+ LA  AV   +NG++ DL  P+  + ++E++
Sbjct: 62  IKITLTDGKIVDGESWKTTPYQLAVGISQGLASNAVIAKVNGELWDLDRPLEGDCTLELL 121

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQ 121
           T +D  + AV  HS AHI+ EA++  +    +  GP IE+GFYYD + +++  SS E   
Sbjct: 122 TFDDEEAQAVYWHSSAHILGEAMEGFYGGC-LCYGPPIENGFYYDMYIEDRGVSSTEFPA 180

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +E + + II    PF +  +  E   ++F+  K  +K  IL         T+YR G   D
Sbjct: 181 LENRCKNIIKEKQPFERLEVKKEILLDMFKYNK--FKCRILNEKVNTPTTTVYRCGPLID 238

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHVR TG++K   K+ K +  YW G ++   L RIYG ++   + + ++  F EE+
Sbjct: 239 LCRGPHVRHTGKIKAL-KIFKNSSTYWEGKADMETLQRIYGISFPDNKMMKEWEKFQEEA 297

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVL 300
             RDHRK+ +E +LF   +   G  F+  +G  ++ TL  ++R +  K ++ E+ +P + 
Sbjct: 298 RNRDHRKIGKEQELFFFHDLSPGSCFFLPRGAFLYNTLTDFIREEYHKRNFTEVVSPNIF 357

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  LW+ SGHW  Y  NMF+     +T      FALKPMNCPGH  +F H  +S+RE+P+
Sbjct: 358 NSKLWETSGHWQHYSENMFSFDIEKET------FALKPMNCPGHCLMFAHRPRSWREMPL 411

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQ 399
           RLA+FG ++RNE SG+L GL RVR F QDDAH+FCT EQ
Sbjct: 412 RLADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCTIEQ 450



 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 61/163 (37%), Positives = 92/163 (56%), Gaps = 2/163 (1%)

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE-KCHPVMIHRAVFGSIERFIGIMIEN 541
           +KDA+GR  QC TIQ+DF LP RFN  YV    + K  PV+IHRAV GS+ER I I+ EN
Sbjct: 460 IKDALGRYHQCATIQLDFQLPIRFNLTYVGKDGDDKKRPVIIHRAVLGSVERMIAILAEN 519

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF-RNETINYKIREHSI 600
           + G  P WLSP Q +V  +  ++  YAQ++           + D  ++ T+N KIR   +
Sbjct: 520 YGGKWPFWLSPRQVMVVPVGPTSEGYAQQVCTEFFEAGFMTDVDLDQSCTLNKKIRNAQL 579

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +   I++ G+KE +  ++ +R   +    ++ +  AI  L K
Sbjct: 580 AQYNFILVVGEKEKANHAVNVRTRDNKVHGEILVSSAIEKLKK 622


>gi|221109010|ref|XP_002168836.1| PREDICTED: hypothetical protein, partial [Hydra magnipapillata]
          Length = 384

 Score =  285 bits (728), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 150/390 (38%), Positives = 233/390 (59%), Gaps = 11/390 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           IK+T PDGS++ F    T  DVA++IS   A+  ++ + N    + S P+  +G++ + T
Sbjct: 2   IKVTLPDGSVREFAQGVTPMDVAKNISEGFARNVISASYNDTTIETSTPLTTDGNLTLYT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQI 122
             D        HS +H+MA+A++ ++  +++ +GP I++GFYYD D  +   +  +  +I
Sbjct: 62  WNDKEGKKAFWHSTSHVMAQALEEMYSGIKLTLGPAIDNGFYYDVDFGDNKITDADFKKI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E ++ EI      F  + +S  +A E++  K   YK E++ ++     +T      +FDL
Sbjct: 122 EDRVLEISREKHEFKMRSVSKAEALEVY--KNNEYKTELISNL-EDGTITFCDHANFFDL 178

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRG H+ +TG +K   K+M +AGAYWRGD     L+R+YGT++  Q++LT YL  LEE++
Sbjct: 179 CRGGHIPNTGIIKAV-KIMSIAGAYWRGDEKNKQLTRVYGTSFPKQKDLTDYLELLEEAK 237

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           +RDHRKL +E+DLFH ++  G G+  W  KG  +   L  ++++ + K  YE++ TP + 
Sbjct: 238 RRDHRKLGKELDLFHFSQRVGQGLPLWLPKGAALRDRLEQFLKKAQKKAGYEQVVTPHIG 297

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            + L+  SGH+  Y A+ F       T  +   F LKPMNCP H  ++N    SY++LP 
Sbjct: 298 QKELYVTSGHYAKYGADSFQPIT---TPAEGEEFLLKPMNCPHHCEIYNSRPWSYKDLPK 354

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
           R AEFG+VYR E SG LHGL RVRGFTQDD
Sbjct: 355 RYAEFGTVYRYEQSGELHGLTRVRGFTQDD 384


>gi|164659836|ref|XP_001731042.1| hypothetical protein MGL_2041 [Malassezia globosa CBS 7966]
 gi|159104940|gb|EDP43828.1| hypothetical protein MGL_2041 [Malassezia globosa CBS 7966]
          Length = 815

 Score =  285 bits (728), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 171/466 (36%), Positives = 239/466 (51%), Gaps = 65/466 (13%)

Query: 211 DSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHR 270
           +S +P+L R+ G ++ + Q+L QY   + E EK DHR L     LF   +   G  F   
Sbjct: 290 ESTQPLL-RVRGISFPSAQDLQQYSARMSELEKSDHRHLGIAQGLFFAHDSSPGSPFVMP 348

Query: 271 KGWKIFQTLISYMRRKIKD-----DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD 325
            G +    L+  + R I+D      Y+E+ TPQ+    LW+QSGHW+ YR +MF+ +   
Sbjct: 349 HGMR----LLRKVERVIRDLYDTFGYDEVQTPQLFRSSLWKQSGHWEKYREDMFSAQGFS 404

Query: 326 DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRG 385
                   F LKPMNCPGH  +F H  +SYRELP+RLAEF  ++RNE SG+L GL RVR 
Sbjct: 405 CCGAHDDVFGLKPMNCPGHCVMFAHQPRSYRELPMRLAEFSPLHRNEASGALSGLTRVRR 464

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF-EKIMVKLSTRPEKRVGSDALWDDA 444
           F QDDAHVFCT  Q+  E   + +++   Y+ FGF ++  + LSTRP   +G    WD A
Sbjct: 465 FHQDDAHVFCTPAQVATEIESMLHMLSLAYRVFGFGDRFELVLSTRPPNFLGQVEAWDHA 524

Query: 445 ENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPS 504
           E  +K  LD   +     +N     G+GAFYGPK +  L DA+GR  Q  TIQ+DF LP 
Sbjct: 525 EASLKEALDA--SGKPWTLNE----GDGAFYGPKIDIRLVDAMGRKHQTATIQLDFQLPE 578

Query: 505 RFNAFYVNS----HSEK-----CHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQA 555
           RF   Y  S     +E+       PVMIHRA+ GS ERF+ I++E  KG  P WLSP QA
Sbjct: 579 RFGLEYATSSQVPSTEQVRPGYARPVMIHRAILGSFERFLAILVEQCKGWWPFWLSPRQA 638

Query: 556 IVTTITS-------SAVEYAQEIANLLKSH-----------------HLSIETDFRN--- 588
           +V    S       +  +YA  +   L  H                 H +++   R    
Sbjct: 639 VVIPAFSGNEETHQAVADYAAHVQYTLSGHTHETRETRSPFLSPTMAHQTLQVPSRTRFQ 698

Query: 589 ------------ETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
                       +T+  K+R   + +    +I G +EA  R++ +R
Sbjct: 699 IELPPQSLVPAGDTLGKKVRHAQLSRFNFFLIVGPQEAKNRTVSVR 744


>gi|255730209|ref|XP_002550029.1| threonyl-tRNA synthetase, mitochondrial precursor [Candida
           tropicalis MYA-3404]
 gi|240131986|gb|EER31544.1| threonyl-tRNA synthetase, mitochondrial precursor [Candida
           tropicalis MYA-3404]
          Length = 455

 Score =  284 bits (726), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 154/407 (37%), Positives = 231/407 (56%), Gaps = 29/407 (7%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQ 298
           ES  + +  ++ +  L+       G IF+   G +I   LI +M+ ++ K  ++E+ TP 
Sbjct: 27  ESSTQSNHAISTKQLLYTTDPVSPGSIFFLPHGTRILNKLIQFMKNQQTKYGFQEVITPL 86

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT-------FALKPMNCPGHVAVFNHG 351
           +    LW++SGHWD+Y+ +MF V   +D  K+  T       + LKPMNCP H  +F   
Sbjct: 87  IFKTKLWKKSGHWDNYKDDMFKV-VGNDLSKEEHTDNIEEHEYGLKPMNCPSHCMIFAKF 145

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI 411
            +SY+ELP+R ++F S++RNE SG+L GL RVR F QDD H+FC+  Q+  E      LI
Sbjct: 146 DRSYQELPIRYSDFSSLHRNEASGALSGLTRVRRFHQDDGHIFCSMSQIDQEIKNTLTLI 205

Query: 412 ISIYKDFGFEKIMVKLSTRP-EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
              YK FG + I   LSTRP EK +G    W+ AE+ +K VL++     Q  I      G
Sbjct: 206 KDTYKVFGIDDIEFYLSTRPEEKYIGDIETWNKAEDQLKNVLNSTAGEGQWSIRE----G 261

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH-PVMIHRAVFG 529
           +GAFYGPK + +LKDA G+  Q GTIQ+DF LP+RF   YV     + H P+++HRAV+G
Sbjct: 262 DGAFYGPKIDVLLKDAFGKKHQVGTIQLDFQLPNRFELKYVGEDGNRDHQPILVHRAVYG 321

Query: 530 SIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANL--------------L 575
           S+ERF  I++++++G  P W++P QAI+  I  S V+ A+ +                 L
Sbjct: 322 SLERFFAILLDHYQGKWPFWINPRQAIIIPINESHVQAAESLQQKLGGDLLNSDESIAPL 381

Query: 576 KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
            S++  ++ D R ETI  + +E   K    II+ GDKE +  +  +R
Sbjct: 382 TSYNFYVDIDKRGETIGARTKEAIQKGYSYIILIGDKEITNGTFAVR 428


>gi|60416072|gb|AAH90718.1| Zgc:92586 protein [Danio rerio]
          Length = 359

 Score =  284 bits (726), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 156/362 (43%), Positives = 218/362 (60%), Gaps = 23/362 (6%)

Query: 288 KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
           K  ++E+ TP + +  LWQ SGHW  Y  NMF+ +   +       FALKPMNCPGH  +
Sbjct: 2   KRGFQEVVTPNIYNSKLWQTSGHWQHYSENMFSFEVEKEI------FALKPMNCPGHCLM 55

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
           F+H  +S+RELP+RLA+FG ++RNE SG+L GL RVR F QDDAH+FC+ +Q+ +E    
Sbjct: 56  FDHRPRSWRELPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCSMDQIESEIKGC 115

Query: 408 HNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGV 467
            + + ++Y  FGF    + LSTRPEK +G   +WD AE         ++NS  D     V
Sbjct: 116 LDFLRTVYDVFGF-TFKLNLSTRPEKFLGEPEVWDQAEK-------QLENSLNDFGEKWV 167

Query: 468 L-LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH--SEKCHPVMIH 524
           L  G+GAFYGPK +  +KDAIGR  QC TIQ+DF LP RFN  +V SH   +K  PV+IH
Sbjct: 168 LNPGDGAFYGPKIDIQIKDAIGRYHQCATIQLDFQLPIRFNLTFV-SHDGDDKKRPVIIH 226

Query: 525 RAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIET 584
           RA+ GS+ER I I+ EN+ G  PLWLSP Q +V  I  +  EYAQ +    + H + + T
Sbjct: 227 RAILGSVERMIAILTENYGGKWPLWLSPRQVMVVPIGPTCDEYAQRVQK--EFHKVGLMT 284

Query: 585 DFRNE---TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           D   +   T+N KIR   + +   I++ G+KE S  ++ +R   +    + SL D +  L
Sbjct: 285 DVDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKSSDTVNVRTRDNKVHGERSLTDCMERL 344

Query: 642 TK 643
            +
Sbjct: 345 KQ 346


>gi|260942551|ref|XP_002615574.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
 gi|238850864|gb|EEQ40328.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
          Length = 453

 Score =  283 bits (725), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 147/384 (38%), Positives = 225/384 (58%), Gaps = 29/384 (7%)

Query: 264 GVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV- 321
           G IF+   G +IF  L+ +M+ +++K  ++E+ TP +    LW+ SGHWD+Y+ +MF V 
Sbjct: 47  GSIFFLPHGTRIFNKLVHFMKNQQLKYGFQEVITPLIYKTKLWEVSGHWDNYKDDMFKVI 106

Query: 322 -----KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
                K  D     L  + LKPMNCPGH  +F+   +SY ELP+RL++F S++RNE SG+
Sbjct: 107 GNDLTKEKDSEEAHLHEYGLKPMNCPGHCLIFSKFERSYNELPIRLSDFSSLHRNEASGA 166

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK---IMVKLSTRPEK 433
           L GL RVR F QDD H+FC  +Q+  E     NLI   Y  FG +    +   LSTRPEK
Sbjct: 167 LSGLTRVRRFHQDDGHIFCEMDQIHQEITNTINLIKDTYNVFGIDSTKDVDFFLSTRPEK 226

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
            +G    WD+AE+ +  VLDT    ++  I      G+GAFYGPK + +L DA  +  Q 
Sbjct: 227 FIGDAQTWDEAESQLASVLDTTAGKNKWSIRE----GDGAFYGPKIDILLTDAFNKKHQV 282

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEK-CHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
           GTIQ+DF LP+RF   Y++ + ++   P+MIHRAVFGS+ERF  I++++++G  P W++P
Sbjct: 283 GTIQLDFQLPARFELKYISRNGDRDNQPIMIHRAVFGSLERFFAILLDHYQGKWPFWINP 342

Query: 553 IQAIVTTITSSAVEYAQEIANLL--------------KSHHLSIETDFRNETINYKIREH 598
            QAI+  ++    E A+++   L                ++  ++ D R+ET+  +I++ 
Sbjct: 343 RQAIIIPVSDKHHEAAEKLQKQLVGDIVNSESSIAPMTGYNFFVDVDRRSETVGNRIKDA 402

Query: 599 SIKKIPIIIICGDKEASERSIGIR 622
             K    I++ GDK+    ++ IR
Sbjct: 403 VKKGYSYILMVGDKDIENGTVAIR 426


>gi|260896982|ref|ZP_05905478.1| threonine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
 gi|308087658|gb|EFO37353.1| threonine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
          Length = 290

 Score =  283 bits (723), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 132/275 (48%), Positives = 179/275 (65%), Gaps = 6/275 (2%)

Query: 370 RNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
           RNEPSG+LHG+MRVRGFTQDDAH+FCT+ Q+  E      ++   Y+ FGF+ I+VKLST
Sbjct: 12  RNEPSGALHGIMRVRGFTQDDAHIFCTESQIQEEVTSCIKMVYDTYQTFGFDNIVVKLST 71

Query: 430 RPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGR 489
           RPEKRVGSD +WD +E  +K  L++++      I   +  GEGAFYGPK E+ L D + R
Sbjct: 72  RPEKRVGSDEIWDQSEEALKQSLESME------IPYEIQEGEGAFYGPKIEFTLYDCLDR 125

Query: 490 DWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW 549
            WQCGT+Q+DFNLP R  A YV  ++E+  PVMIHRA+ GS+ERFIGI+IE + G  P W
Sbjct: 126 AWQCGTVQLDFNLPGRLGATYVGENNERLVPVMIHRAILGSLERFIGILIEEYAGFFPTW 185

Query: 550 LSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIIC 609
           L+P QA++  IT     Y QEI   L+   +  + D RNE I +KIREH++K++P +++ 
Sbjct: 186 LAPEQAVLMNITDKQSGYVQEIVQKLQKSGIRAKADLRNEKIGFKIREHTLKRVPYMLVV 245

Query: 610 GDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           GD+E     I +R        K  + D I  +  E
Sbjct: 246 GDQEMEAGEIAVRTRKGKDLGKFKVDDFIAYIQDE 280


>gi|332967802|gb|EGK06905.1| threonine--tRNA ligase [Desmospora sp. 8437]
          Length = 279

 Score =  282 bits (721), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 139/291 (47%), Positives = 194/291 (66%), Gaps = 14/291 (4%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRA 316
            +E+  G+ F+  KG  I   L S+ R+  K+  Y+E+ TP +++Q LW+QSGHWD YR 
Sbjct: 2   FSEEAPGMPFYLPKGMTIRNELESFSRKLQKEAGYQEVRTPLMMNQRLWEQSGHWDHYRE 61

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
           NM+          D   F++KPMNCPGH+ VF HG++SYR+LP+RLAEFG V+R+E SG+
Sbjct: 62  NMYFTHV------DETAFSIKPMNCPGHMLVFKHGIRSYRDLPLRLAEFGQVHRHELSGA 115

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
           LHG+ RVR FTQDDAH+F   +Q+  E      L+  IY  FGF    V+LSTRPE  +G
Sbjct: 116 LHGMFRVRTFTQDDAHIFVRPDQIEAEVQAAMQLVDRIYSVFGF-PYTVELSTRPEDSMG 174

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
           S+ LW+ AE  +K VLD  ++  + RIN     GEGAFYGPK ++ ++DA+ R  QC TI
Sbjct: 175 SEQLWNQAETALKNVLD--QSGVEYRINE----GEGAFYGPKIDFHIRDALKRSHQCATI 228

Query: 497 QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           Q+DF +P +F+  YV   + +  PV+IHRA+FGSI+RFIG+++E+  G  P
Sbjct: 229 QLDFQMPEKFDLSYVGEGNGRHRPVVIHRAIFGSIDRFIGVLVEHTGGAFP 279


>gi|303318040|ref|XP_003069022.1| threonyl-tRNA synthetase, putative [Coccidioides posadasii C735
           delta SOWgp]
 gi|240108703|gb|EER26877.1| threonyl-tRNA synthetase, putative [Coccidioides posadasii C735
           delta SOWgp]
 gi|320036822|gb|EFW18760.1| threonyl-tRNA synthetase [Coccidioides posadasii str. Silveira]
          Length = 598

 Score =  281 bits (718), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 158/417 (37%), Positives = 225/417 (53%), Gaps = 46/417 (11%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHR +  + DLF       G  ++H  G  IF  L+S++R + K   +EE+ TP +  + 
Sbjct: 132 DHRIIGTDQDLFGSTPFSPGSPYFHPDGAHIFNKLMSFLRAQYKQYGFEEVITPTMYKKS 191

Query: 304 LWQQSGHWDSYRANMFAVK-------CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           LW++SGHW  Y+ +M+ V+         D  I +   + LKPMNCPGH  +F    +SYR
Sbjct: 192 LWEKSGHWHIYKDDMYEVRGRGATGQTVDVEIGEDEQYGLKPMNCPGHCVLFASKTRSYR 251

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
            LPVR AEF  ++RNE SGSL GL RVR F QDD H+FC  EQ+  E         S+  
Sbjct: 252 SLPVRFAEFSPLHRNEISGSLSGLTRVRRFHQDDGHIFCRPEQIEREIELTLQFTESVLS 311

Query: 417 DFGFEKIMVKLSTRPEKR-VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
            FG E   + LSTRPEK  +GS ALW+DAEN +K  LD  K+     IN     G+GAFY
Sbjct: 312 TFGLEDYRLVLSTRPEKDYLGSLALWNDAENQLKDALD--KSGKPWHINE----GDGAFY 365

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE-------KCHPVMIHRAVF 528
           GPK +  ++D+ G+  Q  TIQ+D NLP RF   YV   +E       K  PV+IHRA+F
Sbjct: 366 GPKIDLQIRDSRGKYHQLSTIQLDMNLPQRFGLEYVVPGTETDVNGPRKATPVLIHRAIF 425

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQAIVTTITS--SAVEYAQEIANLLKSHH------- 579
           GS+ERF  ++ E++ G  P WLSP Q I+ T+ +    +  AQ +A+ ++ +        
Sbjct: 426 GSLERFFALLAEHYNGRWPFWLSPRQGIILTVNNDPQVLRTAQTVASGMRGYQSLTFNES 485

Query: 580 ---------------LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
                            I+ D  + ++  KIRE   +K  ++ + G  + S  S+G+
Sbjct: 486 EVVATPGLLYPAQATFQIDVDTSSRSLGKKIREAMGRKYKLVFVIGPSDVSNGSVGV 542


>gi|300120318|emb|CBK19872.2| unnamed protein product [Blastocystis hominis]
          Length = 414

 Score =  280 bits (717), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 148/411 (36%), Positives = 237/411 (57%), Gaps = 24/411 (5%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTP 297
           + E+++RDHR + +++++     +  G +F+  +G   +  L+ Y++     +YEEI +P
Sbjct: 1   MREAKERDHRVVGKKLEMLLFDGNSPGNVFFLDRGLFTYSRLVEYLKSHYLQEYEEIASP 60

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR- 356
            +   +LW+ SGH+D YR+NMF V   DD  KD  TF LKPMNCP H  V+ H  +SYR 
Sbjct: 61  LLFKSNLWKISGHYDHYRSNMFQVNTRDD--KDEETF-LKPMNCPSHCIVYAHKGRSYRS 117

Query: 357 ---------ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
                    +LP+R AEF +++R E SG+L GL R+  F QDD H+FC K+Q+  E   +
Sbjct: 118 SLWLAVTSSDLPIRYAEFTAIHRQENSGALGGLTRLNMFHQDDGHIFCRKDQISQEISTL 177

Query: 408 HNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGV 467
            + I S+Y   GF+   V LST+P   VG    W D E  ++ +L+ +       ++  V
Sbjct: 178 LSTIKSLYSKLGFDFSFV-LSTQPSDSVGQSDEWKDTEAQLRSILEKLG------LDYSV 230

Query: 468 LLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAV 527
             G+GAFY PK + +++D+I R  QCGTIQ+D  LP +F   + N+  E   PV+IHRA+
Sbjct: 231 EEGDGAFYAPKIDVLIQDSIRRYHQCGTIQLDVQLPKKFGLKFRNADGEFETPVLIHRAI 290

Query: 528 FGSIERFIGIMIENFKGNLPLWLSPIQ-AIVTTITSSAVEYAQEIANLL---KSHHLSIE 583
           +GS+ERF+G+ IE+  G  PL  SP Q A++     S +E+ +E+A  L    S  L ++
Sbjct: 291 YGSLERFLGVYIEHCNGRFPLCFSPYQIALLPVSDPSHLEFCREVAEQLTNGNSDKLRVD 350

Query: 584 TDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
                 ++  +IRE ++K    ++  G++E   +++ +R  GS   Q +S+
Sbjct: 351 ERMMGRSLGKRIRECTMKHYNYMVTVGEEEVKSKTLSVRSRGSKDIQHISV 401


>gi|156842346|ref|XP_001644541.1| hypothetical protein Kpol_1052p30 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156115186|gb|EDO16683.1| hypothetical protein Kpol_1052p30 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 463

 Score =  280 bits (715), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 152/388 (39%), Positives = 233/388 (60%), Gaps = 38/388 (9%)

Query: 264 GVIFWHRKGWKIFQTLISYMR--RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           G +F+   G KIF  L+ +M+  ++ K  ++E+ TP +  + LW+QSGHW++Y+ +MF V
Sbjct: 58  GSVFFLPNGAKIFNKLVQFMKLQQEHKFGFKEVITPIIYRKSLWEQSGHWENYKEDMFKV 117

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           +  D + ++   + LKPMNCPGH  +F    +SY ELP+RL++F  ++RNE SG+L GL 
Sbjct: 118 EGQDISKEE---YGLKPMNCPGHCMIFKKFDRSYHELPLRLSDFSPLHRNEASGALSGLT 174

Query: 382 RVRGFTQDDAHVFCTKEQMFNE---CLKIHNLIISIYKDFGFEK------IMVKLSTRPE 432
           RVR F QDD H+FCTKEQ+  E   CLK+ +L  S   +F   K       ++KLSTRP+
Sbjct: 175 RVRKFHQDDGHIFCTKEQVEEEIIKCLKMVDLCYSRVFNFNKSKNNDSSSYIIKLSTRPD 234

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
           K +G   +W+ AE+ +K +L+  K+  +  IN G    +GAFYGPK + ++KD   +  Q
Sbjct: 235 KYIGDLEIWNHAEDTLKSILE--KSGKKWDINEG----DGAFYGPKIDILVKDHNNKTHQ 288

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
             TIQ+DF LP RFN  Y +  +    P+MIHRA FGS+ERFI ++I++ +G  P WL+P
Sbjct: 289 VATIQLDFQLPERFNLRYKDKDNSYKRPIMIHRAAFGSLERFIAMLIDSNEGKWPFWLNP 348

Query: 553 IQAI---VTTITSSAVEYAQEIANLLK---------------SHHLSIETDFRNETINYK 594
            QA+   V T   S V  ++++A+ L+               S H +++ D R+E + Y+
Sbjct: 349 RQAMIIPVNTKIKSHVSESKQLASKLRGESADLDDLTPVPFNSFHFNVDVDLRSEPVGYR 408

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIR 622
           I++  +K    +II GD+E       IR
Sbjct: 409 IKDAIMKNYSYLIIIGDEEVETGRYAIR 436


>gi|50306435|ref|XP_453191.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49642325|emb|CAH00287.1| KLLA0D02772p [Kluyveromyces lactis]
          Length = 461

 Score =  279 bits (714), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 155/397 (39%), Positives = 234/397 (58%), Gaps = 37/397 (9%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKDDY--EEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           G IF+   G KIF  L+S+M+ + ++ Y  +E+ TP +  + LW+QSGHW++Y+ +MF V
Sbjct: 60  GSIFFLPNGTKIFNKLVSFMKLQQQNKYGFQEVVTPLIYRKTLWEQSGHWENYKDDMFRV 119

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           +  D + ++   + LKPMNCPGH  VF    +SY ELP+R ++F  ++RNE SG+L GL 
Sbjct: 120 EGNDVSKEE---YGLKPMNCPGHCVVFKRFDRSYNELPLRFSDFSPLHRNEASGALSGLT 176

Query: 382 RVRGFTQDDAHVFCTKEQMFNE---CLKIHNL----IISIYKDFGFEKIMVKLSTRPEKR 434
           RVR F QDD H+FCT +Q+  E   CL++ ++    +  I  D       + LSTRPEK 
Sbjct: 177 RVRKFHQDDGHIFCTPDQVRQEIQKCLELVDMCYTKVFPISGDSKQAAYSLTLSTRPEKY 236

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           VG   +WD AE+++K   DT+++  Q         G+GAFYGPK + ++ D  G+  Q  
Sbjct: 237 VGDIEVWDHAEDVLK---DTLQSWGQPWTTNE---GDGAFYGPKIDILVNDHTGKSHQVA 290

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQ 554
           TIQ+DF LP RF+  + +  +    P+MIHRAVFGS+ERF+ I+I++ KG  P WL+P Q
Sbjct: 291 TIQLDFQLPERFDLQFKDKDNSYKRPIMIHRAVFGSVERFMAILIDSSKGKWPFWLNPNQ 350

Query: 555 AIVTTITSS---AVEYAQEIANLLK-------------SHHLSIETDFRNETINYKIREH 598
            +V  + +     +E A +  N L+             S H S++ D R+E+++ +IRE 
Sbjct: 351 CMVIPVKTEDEKIMELAFKTVNSLRGENSDPKSPIPLNSFHFSVDMDARDESVSKRIREA 410

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
             K    II+ GDKE     + IR   +  ++KV LL
Sbjct: 411 IKKHYSYIIMIGDKEVEAGKVAIR---TRESKKVDLL 444


>gi|126138470|ref|XP_001385758.1| mitochondrial threonyl tRNA synthetase [Scheffersomyces stipitis
           CBS 6054]
 gi|126093036|gb|ABN67729.1| mitochondrial threonyl tRNA synthetase [Scheffersomyces stipitis
           CBS 6054]
          Length = 449

 Score =  279 bits (714), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 153/416 (36%), Positives = 234/416 (56%), Gaps = 37/416 (8%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQ 298
           ES  ++++ ++ +  L+       G IF+   G +IF  L+ +M+ ++ K  ++E+ TP 
Sbjct: 11  ESSTQNNQTISNKQLLYTTDPLTPGSIFFLPHGTRIFNKLVQFMKNQQTKYGFQEVITPL 70

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCAD--------------DTIKDLRTFALKPMNCPGH 344
           +    LW+ SGHW +Y+ +MF V   D              D  + L  + LKPMNCPGH
Sbjct: 71  IYKSKLWETSGHWQNYKDDMFKVVGNDVSKEHDIHNEQYSHDKSEGLHEYGLKPMNCPGH 130

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +F+   +SY ELP+RL++F S++RNE SG+L GL RVR F QDD H+FC   Q+  E 
Sbjct: 131 CLIFSKFDRSYNELPIRLSDFSSLHRNEASGALSGLTRVRRFHQDDGHIFCEMGQINQEI 190

Query: 405 LKIHNLIISIYKDFGF--EKIMVKLSTRPEKR-VGSDALWDDAENIMKGVLDTIKNSSQD 461
               NLI   YK FG   + I   LSTRPE++ +G    W+ AE  +K VLDT       
Sbjct: 191 HNTINLIKGTYKVFGIGEKDIEYFLSTRPEEKFMGDIETWNMAEEQLKNVLDTAAGQGNW 250

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK-CHP 520
           +IN     G GAFYGPK + +L DA  +  Q GTIQ+DF LP+RF+  YV     +   P
Sbjct: 251 QINE----GGGAFYGPKIDVLLTDAFNKKHQVGTIQLDFQLPARFDLKYVAEDGTRDNQP 306

Query: 521 VMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLK---- 576
           +M+HRAVFGS+ERF  I++++++G  P W++P QA++  + +S VE A+++  +L     
Sbjct: 307 IMVHRAVFGSLERFFAILLDHYQGKWPFWINPRQAVIVPVNASHVEAAEKLHKMLSGDII 366

Query: 577 ----------SHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
                      ++  ++ D R ET+  +I++   K    II+ GDK+    ++ IR
Sbjct: 367 NSVNDISPITGYNFYVDVDRRAETVGSRIKDAVQKGYSYIIMIGDKDIKNGTVAIR 422


>gi|332220155|ref|XP_003259223.1| PREDICTED: threonyl-tRNA synthetase, mitochondrial isoform 2
           [Nomascus leucogenys]
          Length = 588

 Score =  279 bits (714), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 146/353 (41%), Positives = 207/353 (58%), Gaps = 23/353 (6%)

Query: 282 YMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKC----------ADDTIKDL 331
           Y RR     + E+ TP +    LW+QSGHW+ Y+ +MFAV+           +DD+ + +
Sbjct: 213 YARR----GFSEVKTPTLFSTKLWEQSGHWEHYQEDMFAVQPPGSDRPPSSQSDDSTRHI 268

Query: 332 R-TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
             T ALKPMNCP H  +F H  +S+RELP+RLA+FG+++R E SGSL GL R+R F QDD
Sbjct: 269 TDTLALKPMNCPAHCLMFAHRPRSWRELPLRLADFGALHRAEASGSLRGLTRLRCFQQDD 328

Query: 391 AHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKG 450
           AH+FCT +Q+  E     + + S+Y   GF    + LSTRP   +G   LWD AE ++K 
Sbjct: 329 AHIFCTTDQLEAEIQSCLDFLRSVYAVLGF-SFRLALSTRPSGFLGDPCLWDQAEQVLKQ 387

Query: 451 VLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFY 510
            L          +N+G    +GAFYGPK +  L DA+GR  QCGTIQ+DF LP RF+  Y
Sbjct: 388 ALKEFGEPWD--LNSG----DGAFYGPKIDVHLHDALGRPHQCGTIQLDFQLPLRFDLQY 441

Query: 511 VNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQE 570
                    PV+IHRAV GS+ER +G++ E+  G  PLWLSP Q +V  + +   EYA+E
Sbjct: 442 KGQAGALERPVLIHRAVLGSMERLLGVLAESCGGKWPLWLSPFQVVVIPVGTEQEEYARE 501

Query: 571 IANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
               L++  L  + D  +  T++ +IR+  +       + G KE S+R++ IR
Sbjct: 502 AQQSLQAAGLVSDLDADSGLTLSRRIRQAQLAHYNFQFVVGQKEQSKRTVNIR 554



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/156 (33%), Positives = 79/156 (50%), Gaps = 5/156 (3%)

Query: 2   PSDIKLTFP-DGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
           P  IK++ P D  I     + T   +A  IS +LA  AVA  +NG+  DL  P+   S +
Sbjct: 58  PRTIKISLPGDQKIDAVAWNTTPYQLARQISSTLADTAVAAQVNGEPYDLERPLETDSDL 117

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF--DKEQPFSSD 117
             +T + P   AV  HS  H++  A +     V +  GP  E GFY+DF   KE+     
Sbjct: 118 RFLTFDSPEGKAVFWHSSTHVLGAAAEQFLGAV-LCRGPSTEYGFYHDFFLGKERTIRGS 176

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESK 153
           EL  +E+  QE+ A   PF +   S ++ R+LF+++
Sbjct: 177 ELPVLERICQELTAAAQPFRRLEASRDQLRQLFKAE 212


>gi|114600746|ref|XP_001153909.1| PREDICTED: hypothetical protein isoform 8 [Pan troglodytes]
          Length = 641

 Score =  278 bits (711), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 143/337 (42%), Positives = 202/337 (59%), Gaps = 15/337 (4%)

Query: 288 KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
           K  ++E+ TP + +  LW  SGHW  Y  NMF+ +   +       FALKPMNCPGH  +
Sbjct: 284 KRGFQEVVTPNIFNSRLWMTSGHWQHYSENMFSFEVEKEL------FALKPMNCPGHCLM 337

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
           F+H  +S+RELP+RLA+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E    
Sbjct: 338 FDHRPRSWRELPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDEIKGC 397

Query: 408 HNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGV 467
            + + ++Y  FGF    + LSTRPEK +G   +WD AE  ++  L+      +  +N+  
Sbjct: 398 LDFLRTVYSVFGF-SFKLNLSTRPEKFLGDIEVWDQAEKQLENSLNEFGEKWE--LNS-- 452

Query: 468 LLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRA 526
             G+GAFYGPK +  +KDAIGR  QC TIQ+DF LP RFN  YV+    +K  PV++HRA
Sbjct: 453 --GDGAFYGPKIDIQIKDAIGRYHQCATIQLDFQLPIRFNLTYVSHDGDDKKRPVIVHRA 510

Query: 527 VFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF 586
           + GS+ER I I+ EN+ G  P WLSP Q +V  +  +  EYAQ++           + D 
Sbjct: 511 ILGSVERMIAILTENYGGKWPFWLSPRQVMVVPVGPTCDEYAQKVRQQFHDAKFMADIDL 570

Query: 587 R-NETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
               T+N KIR   + +   I++ G+KE    ++ IR
Sbjct: 571 DPGCTLNKKIRNAQLAQYNFILVVGEKEKISGTVNIR 607



 Score =  110 bits (274), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 71/194 (36%), Positives = 103/194 (53%), Gaps = 6/194 (3%)

Query: 5   IKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEII 62
           IK+T PDG  +       T   +A  IS+ LA   V   +N  V DL  P+ E  S+E++
Sbjct: 83  IKVTLPDGKQVDAESWKTTPYQIACGISQGLADNTVIAKVNNLVWDLDRPLEEDCSLELL 142

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQ 121
             ED  + AV  HS AHIM EA++ ++    +  GP IE+GFYYD + +E   SS++ + 
Sbjct: 143 KFEDEEAQAVYWHSSAHIMGEAMERVYGGC-LCYGPPIENGFYYDMYLEEGGVSSNDFSS 201

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +E   ++II     F +  +  E    +F+  K  +K  IL         T+YR G   D
Sbjct: 202 LEALCKKIIKEKQAFERLEVKKETLLAMFKYNK--FKCRILNEKVNTPTTTVYRCGPLID 259

Query: 182 LCRGPHVRSTGQVK 195
           LCRGPHVR TG++K
Sbjct: 260 LCRGPHVRHTGKIK 273


>gi|68468847|ref|XP_721482.1| hypothetical protein CaO19.2984 [Candida albicans SC5314]
 gi|68469391|ref|XP_721210.1| hypothetical protein CaO19.10501 [Candida albicans SC5314]
 gi|46443119|gb|EAL02403.1| hypothetical protein CaO19.10501 [Candida albicans SC5314]
 gi|46443402|gb|EAL02684.1| hypothetical protein CaO19.2984 [Candida albicans SC5314]
          Length = 455

 Score =  278 bits (711), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 152/407 (37%), Positives = 231/407 (56%), Gaps = 29/407 (7%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQ 298
           ES  + +  ++ +  L+       G IF+   G +I   LI +M+ ++ K  ++E+ TP 
Sbjct: 27  ESSTQSNHVISSKQLLYTTDPTSPGSIFFLPHGTRILNKLIQFMKNQQTKYGFQEVVTPL 86

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT-------FALKPMNCPGHVAVFNHG 351
           +    LW++SGHWD+Y+ +MF V   +D  K+  T       + LKPMNCP H  +F   
Sbjct: 87  IFKTKLWKKSGHWDNYKDDMFKV-VGNDITKEEYTDNIEEHEYGLKPMNCPSHCMIFAKF 145

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI 411
            +SY+ELPVR ++F S++RNE SG+L GL RVR F QDD H+FC+ +Q+  E      LI
Sbjct: 146 DRSYQELPVRYSDFSSLHRNEASGALSGLTRVRRFHQDDGHIFCSMDQIDGEIKNTLELI 205

Query: 412 ISIYKDFGFEKIMVKLSTRPE-KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
              Y  FG  +I   LSTRPE K +G    WD AE+ +K VL    NS+    N     G
Sbjct: 206 KDTYNVFGINEIEFYLSTRPEDKFIGEIETWDIAESQLKNVL----NSTAGEGNWATREG 261

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH-PVMIHRAVFG 529
           +GAFYGPK + +LKDA  +  Q GTIQ+DF LP+RF   YV    ++ H P+++HRAVFG
Sbjct: 262 DGAFYGPKIDVLLKDAFNKKHQVGTIQLDFQLPNRFELKYVGEDGKRDHQPILVHRAVFG 321

Query: 530 SIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLS-------- 581
           S+ERF  I++++++G  P W++P QA++  I  S V  A+E+   L  + +S        
Sbjct: 322 SLERFFAILLDHYQGKWPFWINPRQALIVPINESHVPVAEELQKKLSGNIVSCDNAIAPL 381

Query: 582 ------IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
                 ++ D R ET+  + ++   K    +I+ GDK+ +  +  +R
Sbjct: 382 TGFNFHVDIDKRGETVGARTKDAIQKGYSYLIMIGDKDIANGTFAVR 428


>gi|114559281|ref|XP_001168852.1| PREDICTED: threonyl-tRNA synthetase, mitochondrial isoform 5 [Pan
           troglodytes]
 gi|10434068|dbj|BAB14117.1| unnamed protein product [Homo sapiens]
 gi|55958997|emb|CAI15489.1| threonyl-tRNA synthetase 2, mitochondrial (putative) [Homo sapiens]
 gi|119573934|gb|EAW53549.1| threonyl-tRNA synthetase-like 1, isoform CRA_b [Homo sapiens]
          Length = 588

 Score =  278 bits (710), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 143/344 (41%), Positives = 202/344 (58%), Gaps = 19/344 (5%)

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKC----------ADDTIKDLR-TFALKPM 339
           + E+ TP +    LW+QSGHW+ Y+ +MFAV+           +DD+ + +  T ALKPM
Sbjct: 218 FSEVKTPTLFSTKLWEQSGHWEHYQEDMFAVQPPGSDRPPSSQSDDSTRHITDTLALKPM 277

Query: 340 NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQ 399
           NCP H  +F H  +S+RELP+RLA+FG+++R E SG L GL R+R F QDDAH+FCT +Q
Sbjct: 278 NCPAHCLMFAHRPRSWRELPLRLADFGALHRAEASGGLGGLTRLRCFQQDDAHIFCTTDQ 337

Query: 400 MFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSS 459
           +  E     + + S+Y   GF    + LSTRP   +G   LWD AE ++K  L       
Sbjct: 338 LEAEIQSCLDFLRSVYAVLGF-SFRLALSTRPSGFLGDPCLWDQAEQVLKQALKEFGEPW 396

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
              +N+G    +GAFYGPK +  L DA+GR  QCGTIQ+DF LP RF+  Y         
Sbjct: 397 D--LNSG----DGAFYGPKIDVHLHDALGRPHQCGTIQLDFQLPLRFDLQYKGQAGALER 450

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH 579
           PV+IHRAV GS+ER +G++ E+  G  PLWLSP Q +V  + S   EYA+E    L++  
Sbjct: 451 PVLIHRAVLGSVERLLGVLAESCGGKWPLWLSPFQVVVIPVGSEQEEYAKEAQQSLRAAG 510

Query: 580 LSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           L  + D  +  T++ +IR   +       + G KE S+R++ IR
Sbjct: 511 LVSDLDADSGLTLSRRIRRAQLAHYNFQFVVGQKEQSKRTVNIR 554



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/156 (33%), Positives = 79/156 (50%), Gaps = 5/156 (3%)

Query: 2   PSDIKLTFPDGS-IKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
           P  IK++ P G  I     + T   +A  IS +LA  AVA  +NG+  DL  P+   S +
Sbjct: 58  PRTIKISLPGGQKIDAVAWNTTPYQLARQISSTLADTAVAAQVNGEPYDLERPLETDSDL 117

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF--DKEQPFSSD 117
             +T + P   AV  HS  H++  A +     V +  GP  E GFY+DF   KE+     
Sbjct: 118 RFLTFDSPEGKAVFWHSSTHVLGAAAEQFLGAV-LCRGPSTEYGFYHDFFLGKERTIRGS 176

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESK 153
           EL  +E+  QE+ A   PF +   S ++ R+LF+++
Sbjct: 177 ELPVLERICQELTAAARPFRRLEASRDQLRQLFKAE 212


>gi|3859700|emb|CAA21975.1| mitochondrial threonyl tRNA synthetase [Candida albicans]
          Length = 455

 Score =  278 bits (710), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 152/407 (37%), Positives = 230/407 (56%), Gaps = 29/407 (7%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQ 298
           ES  + +  ++ +  L+       G IF+   G +I   LI +M+ ++ K  ++E+ TP 
Sbjct: 27  ESSTQSNHVISSKQLLYTTDPTSPGSIFFLPHGTRILNKLIQFMKNQQTKYGFQEVVTPL 86

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT-------FALKPMNCPGHVAVFNHG 351
           +    LW++SGHWD+Y+ +MF V   +D  K+  T       + LKPMNCP H  +F   
Sbjct: 87  IFKTKLWKKSGHWDNYKDDMFKV-VGNDITKEEYTDNIEEHEYGLKPMNCPSHCMIFAKF 145

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI 411
            +SY+ELPVR ++F S++RNE SG+L GL RVR F QDD H+FC+ +Q+  E      LI
Sbjct: 146 DRSYQELPVRYSDFSSLHRNEASGALSGLTRVRRFHQDDGHIFCSMDQIDGEIKNTLELI 205

Query: 412 ISIYKDFGFEKIMVKLSTRPE-KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
              Y  FG  +I   LSTRPE K +G    WD AE+ +K VL    NS+    N     G
Sbjct: 206 KDTYNVFGINEIEFYLSTRPEDKFIGEIETWDIAESQLKNVL----NSTAGEGNWATREG 261

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH-PVMIHRAVFG 529
           +GAFYGPK + +LKDA  +  Q GTIQ+DF LP+RF   YV    ++ H P+++HRAVFG
Sbjct: 262 DGAFYGPKIDVLLKDAFNKKHQVGTIQLDFQLPNRFELKYVGEDGKRDHQPILVHRAVFG 321

Query: 530 SIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLS-------- 581
           S+ERF  I++++++G  P W++P QA++  I  S V  A+E+   L    +S        
Sbjct: 322 SLERFFAILLDHYQGKWPFWINPRQALIVPINESHVPVAEELQKKLSGDIVSCDNAIAPL 381

Query: 582 ------IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
                 ++ D R ET+  + ++   K    +I+ GDK+ +  +  +R
Sbjct: 382 TGFTFHVDIDKRGETVGARTKDAIQKGYSYLIMIGDKDIANGTFAVR 428


>gi|238879230|gb|EEQ42868.1| threonyl-tRNA synthetase, mitochondrial precursor [Candida albicans
           WO-1]
          Length = 455

 Score =  277 bits (709), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 152/407 (37%), Positives = 230/407 (56%), Gaps = 29/407 (7%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQ 298
           ES  + +  ++ +  L+       G IF+   G +I   LI +M+ ++ K  ++E+ TP 
Sbjct: 27  ESSTQSNHVISSKQLLYTTDPTSPGSIFFLPHGTRILNKLIQFMKNQQTKYGFQEVVTPL 86

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT-------FALKPMNCPGHVAVFNHG 351
           +    LW++SGHWD+Y+ +MF V   +D  K+  T       + LKPMNCP H  +F   
Sbjct: 87  IFKTKLWKKSGHWDNYKDDMFKV-VGNDITKEEYTDNIEEHEYGLKPMNCPSHCMIFAKF 145

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI 411
            +SY+ELPVR ++F S++RNE SG+L GL RVR F QDD H+FC+ +Q+  E      LI
Sbjct: 146 DRSYQELPVRYSDFSSLHRNEASGALSGLTRVRRFHQDDGHIFCSMDQIDGEIKNTLELI 205

Query: 412 ISIYKDFGFEKIMVKLSTRPE-KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
              Y  FG  +I   LSTRPE K +G    WD AE+ +K VL    NS+    N     G
Sbjct: 206 KDTYNVFGINEIEFYLSTRPEDKFIGEIETWDIAESQLKNVL----NSTAGEGNWATREG 261

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH-PVMIHRAVFG 529
           +GAFYGPK + +LKDA  +  Q GTIQ+DF LP+RF   YV    ++ H P+++HRAVFG
Sbjct: 262 DGAFYGPKIDVLLKDAFNKKHQVGTIQLDFQLPNRFELKYVGEDGKRDHQPILVHRAVFG 321

Query: 530 SIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLS-------- 581
           S+ERF  I++++++G  P W++P QA++  I  S V  A+E+   L    +S        
Sbjct: 322 SLERFFAILLDHYQGKWPFWINPRQALIVPINESHVPVAEELQKKLSGDIVSCDNAIAPL 381

Query: 582 ------IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
                 ++ D R ET+  + ++   K    +I+ GDK+ +  +  +R
Sbjct: 382 TGFNFHVDIDKRGETVGARTKDAIQKGYSYLIMIGDKDIANGTFAVR 428


>gi|241948445|ref|XP_002416945.1| threonyl-trna synthetase, mitochondrial precursor, putative
           [Candida dubliniensis CD36]
 gi|223640283|emb|CAX44533.1| threonyl-trna synthetase, mitochondrial precursor, putative
           [Candida dubliniensis CD36]
          Length = 455

 Score =  277 bits (709), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 152/408 (37%), Positives = 234/408 (57%), Gaps = 30/408 (7%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTP 297
           E S + +H   ++++ L+       G IF+   G +I   LI +M+ ++ K  ++E+ TP
Sbjct: 27  ESSTQSNHVISSKQL-LYTTDPTSPGSIFFLPHGTRILNKLIQFMKNQQTKYGFQEVVTP 85

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT-------FALKPMNCPGHVAVFNH 350
            +    LW++SGHWD+Y+ +MF V   +D  K+  T       + LKPMNCP H  +F  
Sbjct: 86  LIFKTKLWKKSGHWDNYKDDMFKV-VGNDITKEEHTDNIEEHEYGLKPMNCPSHCMIFAK 144

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
             +SY+ELPVR ++F S++RNE SG+L GL RVR F QDD H+FC+ +Q+  E     +L
Sbjct: 145 FDRSYQELPVRYSDFSSLHRNEASGALSGLTRVRRFHQDDGHIFCSMDQIDGEIKNTLDL 204

Query: 411 IISIYKDFGFEKIMVKLSTRPE-KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL 469
           I   Y  FG  +I   LSTRPE K +G+   WD AE  +K VL    N++    N  +  
Sbjct: 205 IKDTYNVFGINEIEFYLSTRPEDKFIGNIDTWDIAELQLKNVL----NATAGEGNWSIRE 260

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH-PVMIHRAVF 528
           G+GAFYGPK + +LKDA  +  Q GTIQ+DF LP+RF   YV    ++ H P+++HRAVF
Sbjct: 261 GDGAFYGPKIDVLLKDAFNKKHQVGTIQLDFQLPNRFELKYVGEDGKRDHQPILVHRAVF 320

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLS------- 581
           GS+ERF  I++++++G  P W++P QA++  I  S V  A+E+   L    +S       
Sbjct: 321 GSLERFFAILLDHYQGKWPFWINPRQALIVPINESHVPVAEELQKKLSGDIISCDKSIAP 380

Query: 582 -------IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
                  ++ D R ET+  + ++   K    +I+ GDK+ +  +  +R
Sbjct: 381 LTGFNFHVDVDKRGETVGARTKDAIQKGYSYLIMIGDKDIANGTFAVR 428


>gi|114559275|ref|XP_001168898.1| PREDICTED: threonyl-tRNA synthetase-like 1 isoform 7 [Pan
           troglodytes]
          Length = 636

 Score =  277 bits (708), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 143/344 (41%), Positives = 202/344 (58%), Gaps = 19/344 (5%)

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKC----------ADDTIKDLR-TFALKPM 339
           + E+ TP +    LW+QSGHW+ Y+ +MFAV+           +DD+ + +  T ALKPM
Sbjct: 266 FSEVKTPTLFSTKLWEQSGHWEHYQEDMFAVQPPGSDRPPSSQSDDSTRHITDTLALKPM 325

Query: 340 NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQ 399
           NCP H  +F H  +S+RELP+RLA+FG+++R E SG L GL R+R F QDDAH+FCT +Q
Sbjct: 326 NCPAHCLMFAHRPRSWRELPLRLADFGALHRAEASGGLGGLTRLRCFQQDDAHIFCTTDQ 385

Query: 400 MFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSS 459
           +  E     + + S+Y   GF    + LSTRP   +G   LWD AE ++K  L       
Sbjct: 386 LEAEIQSCLDFLRSVYAVLGF-SFRLALSTRPSGFLGDPCLWDQAEQVLKQALKEFGEPW 444

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
              +N+G    +GAFYGPK +  L DA+GR  QCGTIQ+DF LP RF+  Y         
Sbjct: 445 D--LNSG----DGAFYGPKIDVHLHDALGRPHQCGTIQLDFQLPLRFDLQYKGQAGALER 498

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH 579
           PV+IHRAV GS+ER +G++ E+  G  PLWLSP Q +V  + S   EYA+E    L++  
Sbjct: 499 PVLIHRAVLGSVERLLGVLAESCGGKWPLWLSPFQVVVIPVGSEQEEYAKEAQQSLRAAG 558

Query: 580 LSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           L  + D  +  T++ +IR   +       + G KE S+R++ IR
Sbjct: 559 LVSDLDADSGLTLSRRIRRAQLAHYNFQFVVGQKEQSKRTVNIR 602



 Score =  107 bits (268), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 68/197 (34%), Positives = 100/197 (50%), Gaps = 7/197 (3%)

Query: 2   PSDIKLTFPDGS-IKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
           P  IK++ P G  I     + T   +A  IS +LA  AVA  +NG+  DL  P+   S +
Sbjct: 58  PRTIKISLPGGQKIDAVAWNTTPYQLARQISSTLADTAVAAQVNGEPYDLERPLETDSDL 117

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF--DKEQPFSSD 117
             +T + P   AV  HS  H++  A +     V +  GP  E GFY+DF   KE+     
Sbjct: 118 RFLTFDSPEGKAVFWHSSTHVLGAAAEQFLGAV-LCRGPSTEYGFYHDFFLGKERTIRGS 176

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           EL  +E+  QE+ A   PF +   S ++ R+LF  K   +K+ ++E        T+Y  G
Sbjct: 177 ELPVLERICQELTAAARPFRRLEASRDQLRQLF--KDNPFKLHLIEEKVTGPTATVYGCG 234

Query: 178 EWFDLCRGPHVRSTGQV 194
              DLC+GPH+R TGQ+
Sbjct: 235 TLVDLCQGPHLRHTGQI 251


>gi|58700192|ref|ZP_00374690.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|58533291|gb|EAL57792.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
          Length = 246

 Score =  276 bits (705), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 126/244 (51%), Positives = 175/244 (71%), Gaps = 9/244 (3%)

Query: 216 MLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKI 275
           ML RIYGTAW  + EL  YL  L+E+EKRDHRK+A++MDLFHI E+  G +FWH +G+ +
Sbjct: 1   MLQRIYGTAWRNKDELNAYLECLKEAEKRDHRKIAKDMDLFHIQEEAVGQVFWHEQGYIL 60

Query: 276 FQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           +  L SY+R+K I + Y E+ TP ++ + LW++SGHWD +R NMF V  ++      +  
Sbjct: 61  YNVLESYIRKKLINNGYFEVKTPILVSKELWEKSGHWDKFRENMFIVDESES-----KKL 115

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           A+KPMNCP HV +FN   +SYR+LP+R+AEFG+ +RNE SGSLHGLMRVRGFTQDDAH+F
Sbjct: 116 AIKPMNCPCHVQIFNSHTRSYRDLPIRMAEFGTCHRNESSGSLHGLMRVRGFTQDDAHIF 175

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDT 454
           C +EQ+ +E +K  +L+  +Y + GF +I VK S RP+ R G D +WD AE   K +L+ 
Sbjct: 176 CMEEQVNSETIKFCDLLKEVYSELGFNEISVKFSDRPDVRAGDDEVWDRAE---KALLEA 232

Query: 455 IKNS 458
           +K +
Sbjct: 233 VKEA 236


>gi|114559285|ref|XP_001168667.1| PREDICTED: threonyl-tRNA synthetase-like 1 isoform 1 [Pan
           troglodytes]
 gi|55958998|emb|CAI15490.1| threonyl-tRNA synthetase 2, mitochondrial (putative) [Homo sapiens]
          Length = 443

 Score =  275 bits (704), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 143/344 (41%), Positives = 202/344 (58%), Gaps = 19/344 (5%)

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKC----------ADDTIKDLR-TFALKPM 339
           + E+ TP +    LW+QSGHW+ Y+ +MFAV+           +DD+ + +  T ALKPM
Sbjct: 73  FSEVKTPTLFSTKLWEQSGHWEHYQEDMFAVQPPGSDRPPSSQSDDSTRHITDTLALKPM 132

Query: 340 NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQ 399
           NCP H  +F H  +S+RELP+RLA+FG+++R E SG L GL R+R F QDDAH+FCT +Q
Sbjct: 133 NCPAHCLMFAHRPRSWRELPLRLADFGALHRAEASGGLGGLTRLRCFQQDDAHIFCTTDQ 192

Query: 400 MFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSS 459
           +  E     + + S+Y   GF    + LSTRP   +G   LWD AE ++K  L       
Sbjct: 193 LEAEIQSCLDFLRSVYAVLGF-SFRLALSTRPSGFLGDPCLWDQAEQVLKQALKEFGEPW 251

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
              +N+G    +GAFYGPK +  L DA+GR  QCGTIQ+DF LP RF+  Y         
Sbjct: 252 D--LNSG----DGAFYGPKIDVHLHDALGRPHQCGTIQLDFQLPLRFDLQYKGQAGALER 305

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH 579
           PV+IHRAV GS+ER +G++ E+  G  PLWLSP Q +V  + S   EYA+E    L++  
Sbjct: 306 PVLIHRAVLGSVERLLGVLAESCGGKWPLWLSPFQVVVIPVGSEQEEYAKEAQQSLRAAG 365

Query: 580 LSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           L  + D  +  T++ +IR   +       + G KE S+R++ IR
Sbjct: 366 LVSDLDADSGLTLSRRIRRAQLAHYNFQFVVGQKEQSKRTVNIR 409


>gi|320583490|gb|EFW97703.1| Mitochondrial threonyl-tRNA synthetase [Pichia angusta DL-1]
          Length = 427

 Score =  275 bits (704), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 146/401 (36%), Positives = 231/401 (57%), Gaps = 21/401 (5%)

Query: 249 LAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQ 307
           +A +  L+ I     G +F+   G +IF  L+ +M+ ++ K  + E+ +P +  + LW+ 
Sbjct: 19  IATKQQLYMIDASSPGSVFFLPHGTRIFNRLVQFMKIQQEKHGFTEVISPLMYKKDLWET 78

Query: 308 SGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGS 367
           SGHWD+Y  +MF V+    + K    + LKPMNCPGH  +F    +S+ ELP+RL+++ S
Sbjct: 79  SGHWDNYAEDMFRVESNSSSNKLEAVYGLKPMNCPGHCVIFGRFARSHHELPIRLSDWSS 138

Query: 368 VYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKL 427
           ++RNEPSG+L GL RVR F QDD H+FC+K Q+  E  K   LI   Y  FGF+K  + L
Sbjct: 139 LHRNEPSGALTGLTRVRRFHQDDGHIFCSKSQVGAEIGKTLQLIRLCYSVFGFQKYRMML 198

Query: 428 STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAI 487
           STRPE  +G+   W++AEN ++  LD          N  +   +GAFYGPK + ++ D  
Sbjct: 199 STRPETHIGTVEEWEEAENELQKALDRHAGPE----NWAIRDKDGAFYGPKIDVLVTDRT 254

Query: 488 GRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           G++ Q  T+Q+DF LP RF   Y   H  +  P+M+HRAVFGS+ERF+ ++++ ++G  P
Sbjct: 255 GKEHQAATVQLDFQLPQRFQLEYQGEHGPET-PIMVHRAVFGSVERFMALLMDEYEGKWP 313

Query: 548 LWLSPIQAIVTTITSSAVEYAQ------------EIANLLKSHHLSIETDFRNETINYKI 595
            WLSP QA++  +  + +EY++            ++A  L+  +  ++ D R ET+  + 
Sbjct: 314 FWLSPRQAVIIPVNETHLEYSRGIQEKLGGQQDLDVACSLRDVNYYVDVDSRAETVGLRT 373

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
           ++   K    II+ GD+E     I +R   S   +KV  +D
Sbjct: 374 KDAIQKGYNYIILVGDREVQSGKIAVR---SRDNRKVQTMD 411


>gi|38537103|gb|AAR23527.1| threonyl-tRNA synthetase [Homo sapiens]
          Length = 443

 Score =  275 bits (704), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 143/344 (41%), Positives = 202/344 (58%), Gaps = 19/344 (5%)

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKC----------ADDTIKDLR-TFALKPM 339
           + E+ TP +    LW+QSGHW+ Y+ +MFAV+           +DD+ + +  T ALKPM
Sbjct: 73  FSEVKTPTLFSTKLWEQSGHWEHYQEDMFAVQPPGSDRPPSSQSDDSTRHITDTLALKPM 132

Query: 340 NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQ 399
           NCP H  +F H  +S+RELP+RLA+FG+++R E SG L GL R+R F QDDAH+FCT +Q
Sbjct: 133 NCPAHCLMFAHRPRSWRELPLRLADFGALHRAEASGGLGGLTRLRCFQQDDAHIFCTTDQ 192

Query: 400 MFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSS 459
           +  E     + + S+Y   GF    + LSTRP   +G   LWD AE ++K  L       
Sbjct: 193 LEAEIQSCLDFLRSVYAVLGF-SFRLALSTRPSGFLGDPCLWDQAEQVLKQALKEFGEPW 251

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
              +N+G    +GAFYGPK +  L DA+GR  QCGTIQ+DF LP RF+  Y         
Sbjct: 252 D--LNSG----DGAFYGPKIDVHLHDALGRPHQCGTIQLDFQLPLRFDLQYKGQAGALER 305

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH 579
           PV+IHRAV GS+ER +G++ E+  G  PLWLSP Q +V  + S   EYA+E    L++  
Sbjct: 306 PVLIHRAVLGSVERLLGVLAESCGGKWPLWLSPFQVVVIPVGSEQEEYAKEARQSLRAAG 365

Query: 580 LSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           L  + D  +  T++ +IR   +       + G KE S+R++ IR
Sbjct: 366 LVSDLDADSGLTLSRRIRRAQLAHYNFQFVVGQKEQSKRTVNIR 409


>gi|62078771|ref|NP_001014042.1| probable threonyl-tRNA synthetase 2, cytoplasmic [Rattus
           norvegicus]
 gi|54035500|gb|AAH83878.1| Threonyl-tRNA synthetase-like 2 [Rattus norvegicus]
          Length = 553

 Score =  275 bits (702), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 149/387 (38%), Positives = 224/387 (57%), Gaps = 13/387 (3%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAH 79
            T   VA  IS+ LA+  V   +NG + DL  P+  + ++E++  ++  + AV  HS AH
Sbjct: 167 TTPYQVAAGISKELAENTVIAKVNGVLWDLDRPLEGDSTVELLMFDNEEAQAVYWHSSAH 226

Query: 80  IMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQIEKKMQEIIARDSPFLK 138
           ++ EA++ ++    +  GP IE+GFYYD F  ++  SS EL+ +E   + II    PF +
Sbjct: 227 VLGEAME-LYYGGHLCYGPPIENGFYYDMFIGDRVVSSTELSALENICKTIIKEKQPFER 285

Query: 139 QYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFF 198
             +S +   E+F+  K  +K  IL+        T+YR G   DLC+GPHVR TG++K   
Sbjct: 286 LEVSKDSLLEMFKYNK--FKCRILKEKVDTPTTTVYRCGPLIDLCKGPHVRHTGKIKAI- 342

Query: 199 KLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI 258
           K+ K +  YW G+     L R+YG ++   + +  +  F EE+  RDHRK+ +E +LF  
Sbjct: 343 KIFKNSSTYWEGNPEMETLQRVYGISFPDSKMMRDWEKFQEEARSRDHRKIGKEQELFFF 402

Query: 259 AEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRAN 317
            +   G  F+  +G  I+ TL+ ++R +  K ++ E+ +P + +  LW+ SGHW  Y  N
Sbjct: 403 HDLSPGSCFFLPRGAFIYNTLMDFIREEYHKRNFTEVLSPNMYNSKLWETSGHWQHYSNN 462

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           MF      DT      FALKPMNCPGH  +F H  +S+RE+PVR A+FG ++RNE SG+L
Sbjct: 463 MFTFDIEKDT------FALKPMNCPGHCLMFAHRPRSWREMPVRFADFGVLHRNELSGTL 516

Query: 378 HGLMRVRGFTQDDAHVFCTKEQMFNEC 404
            GL RVR F QDDAH+FC  EQ+   C
Sbjct: 517 TGLTRVRRFQQDDAHIFCMVEQLKLPC 543


>gi|50420561|ref|XP_458817.1| DEHA2D08206p [Debaryomyces hansenii CBS767]
 gi|49654484|emb|CAG86963.1| DEHA2D08206p [Debaryomyces hansenii]
          Length = 474

 Score =  273 bits (698), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 148/417 (35%), Positives = 235/417 (56%), Gaps = 37/417 (8%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTP 297
           +ES  + +  ++ +  L+       G IF+   G +IF  L+ +M+ +++K  ++E+ TP
Sbjct: 35  KESSTQANHAISNKQLLYTTDSLTPGSIFFLPHGTRIFNKLVHFMKNQQLKYGFQEVITP 94

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCAD-------------DTIKDLRTFALKPMNCPGH 344
            +    LW+ SGHW++Y+ +MF V   D             D  + L  + LKPMNCPGH
Sbjct: 95  LIYKTKLWEMSGHWENYKEDMFKVVGNDLSKEEDISHEHNHDDSEGLHDYGLKPMNCPGH 154

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +F+   +SY ELP+R ++F S++RNE SG+L GL RVR F QDD H+FC   Q+ +E 
Sbjct: 155 CLIFSKFERSYNELPIRYSDFSSLHRNEASGALSGLTRVRRFHQDDGHIFCELYQIQDEI 214

Query: 405 LKIHNLIISIYKDFGFEKIM---VKLSTRP-EKRVGSDALWDDAENIMKGVLDTIKNSSQ 460
               NLI   YK FG + +      LSTRP +K +G    W+DAE+ +  VLD    ++ 
Sbjct: 215 TNTINLIKDTYKVFGIDSVKDVEFFLSTRPTDKFMGDITTWNDAESQLTNVLD----NTA 270

Query: 461 DRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK-CH 519
            R N  +  G+GAFYGPK + +LKDA  +  Q GTIQ+DF LPSRF   Y++    +   
Sbjct: 271 GRGNWSIREGDGAFYGPKIDILLKDAFDKKHQVGTIQLDFQLPSRFKLNYISKDGNRDNQ 330

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLL---- 575
           P+MIHRAVFGS+ERF  I++++++G  P W++P QA++  +  +  + A  +   L    
Sbjct: 331 PIMIHRAVFGSLERFFAILLDHYQGKWPFWINPRQAVIIPVNDTHHDAAVALQKKLVGDI 390

Query: 576 ----------KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
                       ++  ++ D R+ET+  +I++ + K    I++ GDK+    ++ IR
Sbjct: 391 MDDTVEVSPMTGYNFYVDVDSRSETVGNRIKDATQKGYSYILMLGDKDLQNGTVAIR 447


>gi|207742946|ref|YP_002259338.1| threonyl-trna synthetase protein [Ralstonia solanacearum IPO1609]
 gi|206594341|emb|CAQ61268.1| probable threonyl-trna synthetase protein [Ralstonia solanacearum
           IPO1609]
          Length = 268

 Score =  273 bits (697), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 123/252 (48%), Positives = 166/252 (65%), Gaps = 6/252 (2%)

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
           +LHGLMRVRGF QDDAH+FCT+ Q+  E    ++L  S+Y+DFGFE + VKL+ RP+KR 
Sbjct: 1   ALHGLMRVRGFVQDDAHIFCTEGQIMAEAKDFNDLAFSVYEDFGFENVAVKLALRPDKRA 60

Query: 436 GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGT 495
           G+D +WD AE  ++  L       ++      L GEGAFYGPK EY +KDAIGR WQCGT
Sbjct: 61  GTDEIWDHAEEGLRTALRACGVEWEE------LPGEGAFYGPKVEYHIKDAIGRSWQCGT 114

Query: 496 IQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQA 555
           +Q+D  LP R  A YV   + +  PVM+HRA+ GS ERF+GI++EN  G LPLWL+P Q 
Sbjct: 115 LQLDLVLPERLGAEYVAEDNSRKRPVMLHRAILGSFERFLGILLENHAGALPLWLAPEQV 174

Query: 556 IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEAS 615
           +V +I  +  EYA+ +A  L+        D RNE I YKIREHS++K+P +++ GDKE  
Sbjct: 175 VVMSIADAHAEYAETVAQSLQKQGFRASADLRNEKITYKIREHSLQKVPYLVVVGDKERD 234

Query: 616 ERSIGIRRFGST 627
              + +R  G+ 
Sbjct: 235 GNQVAVRARGNV 246


>gi|296228693|ref|XP_002759920.1| PREDICTED: threonyl-tRNA synthetase, mitochondrial isoform 2
           [Callithrix jacchus]
          Length = 588

 Score =  272 bits (695), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 169/471 (35%), Positives = 240/471 (50%), Gaps = 65/471 (13%)

Query: 182 LCRGPHVRSTGQVKKFF--KLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           LCRGP   + G    FF  K   + G      S  P+L RI        QELT       
Sbjct: 151 LCRGPSTEN-GFYHDFFLGKERTIRG------SELPVLERIC-------QELT------- 189

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQV 299
            +  +  R+L    D  H                ++F+    Y RR     + E+ TP +
Sbjct: 190 -AAAQPFRRLEASRDQLH----------------RLFKA--EYARR----GFFEVKTPTL 226

Query: 300 LDQHLWQQSGHWDSYRANMFAVK-----------CADDTIKDLRTFALKPMNCPGHVAVF 348
               LW+QSGHW+ Y+ +MFAV+               T     T ALKPMNCP H  +F
Sbjct: 227 FSTKLWEQSGHWEHYQEDMFAVQPPGSDRPASSQSDHSTRHTTDTLALKPMNCPAHCLMF 286

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
            H  +S+RELP+RLA+FG+++R E SG L GL R+R F QDDAH+FCT +Q+  E     
Sbjct: 287 AHRPRSWRELPLRLADFGALHRAEASGGLCGLTRLRCFQQDDAHIFCTTDQLEAEIQSCL 346

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
           + + S+Y   GF    + LSTRP   +G   LWD AE +++  L          +N+G  
Sbjct: 347 DFLRSVYAVLGF-SFRLALSTRPSGFLGDPCLWDQAEQVLQQALKEFGEPWD--LNSG-- 401

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
             +GAFYGPK +  L DA+GR  QCGTIQ+DF LP RF+  Y         PV+IHRAV 
Sbjct: 402 --DGAFYGPKIDVHLHDALGRPHQCGTIQLDFQLPLRFDLQYKGQAGALERPVLIHRAVL 459

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRN 588
           GS+ER +G++ E+ +G  PLWLSP Q +V  + +   EYA+E    L++  L  + D  +
Sbjct: 460 GSVERLLGVLAESCRGKWPLWLSPFQVVVIPVGTEQEEYARETQQSLQAAGLVCDLDADS 519

Query: 589 E-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
             T++ +IR   +       + G KE S+ ++ IR   +    + SL +A+
Sbjct: 520 RLTLSRRIRRAQLAHYNFQFVVGQKEQSKSTVNIRTRDNRLLGEWSLPEAV 570



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 79/156 (50%), Gaps = 5/156 (3%)

Query: 2   PSDIKLTFPDGS-IKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
           P  IK++ P G  +     + T   +A  IS +LA  AVA  +NG++ DL  P+   S +
Sbjct: 58  PRTIKISLPGGQKVDAVAWNTTPYQLARQISSTLADTAVAAQVNGELYDLERPLETDSDL 117

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF--DKEQPFSSD 117
             +T + P   AV  HS  H++  A +     V +  GP  E+GFY+DF   KE+     
Sbjct: 118 RFLTFDSPEGKAVFWHSSTHVLGAAAEQFLGAV-LCRGPSTENGFYHDFFLGKERTIRGS 176

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESK 153
           EL  +E+  QE+ A   PF +   S ++   LF+++
Sbjct: 177 ELPVLERICQELTAAAQPFRRLEASRDQLHRLFKAE 212


>gi|295704482|ref|YP_003597557.1| threonyl-tRNA synthetase [Bacillus megaterium DSM 319]
 gi|294802141|gb|ADF39207.1| threonyl-tRNA synthetase [Bacillus megaterium DSM 319]
          Length = 296

 Score =  271 bits (693), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 137/304 (45%), Positives = 197/304 (64%), Gaps = 14/304 (4%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQ 298
           E+EKR+H+KL +E++LF   E+  G+ F+   G  +   L +Y ++K  K  Y+EI TP 
Sbjct: 6   EAEKRNHQKLGQELELFMSMEEAPGMPFFLPNGMIVRNELENYWKQKHYKAGYQEIKTPI 65

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++ Q LW+QSGHW+ Y  NM+          D + +A+KPMNCPG + +FN   +SYREL
Sbjct: 66  MMKQELWEQSGHWEHYHENMYFSNV------DKQNYAIKPMNCPGAILLFNSKRRSYREL 119

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           PVR AE G V+R+E SGSL+GL+RVR FTQDDAH+F    Q+  E  +I   I   Y  F
Sbjct: 120 PVRYAELGLVHRHELSGSLNGLLRVRSFTQDDAHLFVELSQIEAEISRILAFIHDFYSHF 179

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+   V+LSTRPEK +G    W+ AE  ++ VL  I+     ++N     G+GAFYGPK
Sbjct: 180 GFD-YKVELSTRPEKFMGDIETWNQAEKSLQSVL--IEKGLDYQVNE----GDGAFYGPK 232

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++ + D++GR WQCGT+Q+DF +P +F+  Y+   ++   PVMIHRA++GS+ERF+ I+
Sbjct: 233 IDFHILDSLGRSWQCGTVQLDFLMPEKFDCMYIGEDNKPHRPVMIHRAIYGSVERFMAIL 292

Query: 539 IENF 542
           IE  
Sbjct: 293 IEQL 296


>gi|289617913|emb|CBI55490.1| unnamed protein product [Sordaria macrospora]
          Length = 497

 Score =  270 bits (691), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 155/425 (36%), Positives = 226/425 (53%), Gaps = 43/425 (10%)

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVL 300
           E  DHR L  + +LF  +    G   +   G +IF  L+ Y+R++ +   ++E+ TP + 
Sbjct: 51  EAPDHRDLGTQQELFMTSIYSPGSPIFLPNGARIFNRLVEYLRKQYVHYGFQEVITPTIY 110

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT------FALKPMNCPGHVAVFNHGLKS 354
            + LW +SGH ++Y  +MF V     +  D+        + LKPMNCPGH  +F    +S
Sbjct: 111 KKALWAKSGHLENYADDMFTVTSTSPSRADVTEAGEVDEYGLKPMNCPGHCLIFAAQKRS 170

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YR+LP+R A+F  ++RNE SG+L GL RVR F QDD H+FC   Q+ +E  K    I  +
Sbjct: 171 YRDLPIRYADFSPLHRNEISGALSGLTRVRRFHQDDGHIFCRPNQIEDEISKTLEFIRRV 230

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           YKDF      +KLSTRPE  +GS   W+ AE  +K  LDT  +     +N     G+GAF
Sbjct: 231 YKDFRLGSYRLKLSTRPENYMGSLEDWEHAEGSLKRALDT--SGEPWTLNE----GDGAF 284

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE------------------ 516
           YGPK + ILKD+ G++ Q  TIQ+DF LP RF   Y     E                  
Sbjct: 285 YGPKIDVILKDSDGKEHQTATIQLDFQLPKRFELEYQAPAPELEAKGETTTDPELLAVSG 344

Query: 517 KCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSS--AVEYAQEIANL 574
              PVMIHRAV GS ER   ++IE+F G  P WL+P QAIV T+  S   +++A++   +
Sbjct: 345 PVRPVMIHRAVLGSAERMFALLIEHFNGKWPFWLNPRQAIVLTVNDSEPVLQFARKTQRV 404

Query: 575 L------KSH----HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRF 624
           L       SH     L+I+ D    +++ KIRE   +   ++I+ G K+ +  ++ +   
Sbjct: 405 LLGTDSADSHVSPSGLAIDLDDSARSLSLKIREAKTRGYGMVIVVGPKDVANGTVAVDAT 464

Query: 625 GSTTT 629
           G   T
Sbjct: 465 GGLHT 469


>gi|146413645|ref|XP_001482793.1| hypothetical protein PGUG_04748 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 379

 Score =  270 bits (690), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 148/357 (41%), Positives = 211/357 (59%), Gaps = 15/357 (4%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKD 289
           L  YL  +  S   +H  ++ +  L+       G IF+   G +I   LI +M+ ++++ 
Sbjct: 14  LRHYLANVPLSTNTNH-AISVKQQLYTTDPVTPGSIFFLPHGTRIMNKLIQFMKHQQMRY 72

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK---CADDTIKDLRTFALKPMNCPGHVA 346
            +EE+ TP +    LW+ SGHWD+YR +MF V      +     L  + LKPMNCPGH  
Sbjct: 73  GFEEVITPLIYKNQLWKTSGHWDNYRDDMFKVTGNVVHEHEDPQLHEYGLKPMNCPGHCV 132

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           +F+   +SY E P+RL++F S++RNE SG+L GL RVR F QDD H+FC  +Q+ +E   
Sbjct: 133 IFSKFERSYNEFPIRLSDFSSLHRNEASGALSGLTRVRRFHQDDGHIFCEFDQVEDEISN 192

Query: 407 IHNLIISIYKDFGF--EKIMVKLSTRPE-KRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             NLI+  YK FG    +I   LSTRPE K +G  + W+ AE  +  VL    NS    I
Sbjct: 193 TVNLILESYKVFGIPSNEIKFTLSTRPEDKYIGEISTWEKAEEKLSNVLTNSGNSWT--I 250

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH-SEKCHPVM 522
           N     G+GAFYGPK +  L DA G+  Q GTIQ+DF LP+RF+  Y++ H S +  P+M
Sbjct: 251 NP----GDGAFYGPKIDVQLTDAFGKAHQVGTIQLDFQLPARFDLKYIDKHGSRENRPIM 306

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH 579
           IHRAVFGS+ERF  I++++++G  P WL+P QA++  +  S V  AQEI   +   H
Sbjct: 307 IHRAVFGSLERFFAILLDHYQGKWPFWLNPRQALIIPVNDSHVSAAQEIKKQISGRH 363


>gi|190348228|gb|EDK40650.2| hypothetical protein PGUG_04748 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 379

 Score =  270 bits (689), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 142/324 (43%), Positives = 199/324 (61%), Gaps = 14/324 (4%)

Query: 264 GVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK 322
           G IF+   G +I   LI +M+ ++++  +EE+ TP +    LW+ SGHWD+YR +MF V 
Sbjct: 46  GSIFFLPHGTRIMNKLIQFMKHQQMRYGFEEVITPLIYKNQLWKTSGHWDNYRDDMFKVT 105

Query: 323 ---CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHG 379
                +     L  + LKPMNCPGH  +F+   +SY E P+RL++F S++RNE SG+L G
Sbjct: 106 GNVVHEHEDPQLHEYGLKPMNCPGHCVIFSKFERSYNEFPIRLSDFSSLHRNEASGALSG 165

Query: 380 LMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF--EKIMVKLSTRPE-KRVG 436
           L RVR F QDD H+FC  +Q+ +E     NLI+  YK FG    +I   LSTRPE K +G
Sbjct: 166 LTRVRRFHQDDGHIFCEFDQVEDEISNTVNLILESYKVFGIPSNEIKFTLSTRPEDKYIG 225

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
             + W+ AE  +  VL    NS    IN     G+GAFYGPK +  L DA G+  Q GTI
Sbjct: 226 EISTWEKAEEKLSNVLTNSGNSWT--INP----GDGAFYGPKIDVQLTDAFGKAHQVGTI 279

Query: 497 QVDFNLPSRFNAFYVNSH-SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQA 555
           Q+DF LP+RF+  Y++ H S +  P+MIHRAVFGS+ERF  I++++++G  P WL+P QA
Sbjct: 280 QLDFQLPARFDLKYIDKHGSRENRPIMIHRAVFGSLERFFAILLDHYQGKWPFWLNPRQA 339

Query: 556 IVTTITSSAVEYAQEIANLLKSHH 579
           ++  +  S V  AQEI   +   H
Sbjct: 340 LIIPVNDSHVSAAQEIKKQISGRH 363


>gi|148675291|gb|EDL07238.1| threonyl-tRNA synthetase-like 2, isoform CRA_a [Mus musculus]
          Length = 365

 Score =  270 bits (689), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 143/357 (40%), Positives = 208/357 (58%), Gaps = 12/357 (3%)

Query: 93  QVAIGPIIEDGFYYD-FDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFE 151
            +  GP IE+GFYYD F +++  SS EL+ +E   + II    PF +  +S +   E+F+
Sbjct: 8   HLCYGPPIENGFYYDMFIEDRVVSSTELSALENICKTIIKEKQPFERLEVSKDTLLEMFK 67

Query: 152 SKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGD 211
             K  +K  IL+        T+YR G   DLC+GPHVR TG++K   K+ K +  YW G+
Sbjct: 68  YNK--FKCRILKEKVDTPTTTVYRCGPLIDLCKGPHVRHTGKIKAI-KIFKNSSTYWEGN 124

Query: 212 SNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRK 271
                L RIYG ++   + +  +  F EE++ RDHRK+ +E +LF   +   G  F+  +
Sbjct: 125 PEMETLQRIYGISFPDSKMMKDWEKFQEEAKSRDHRKIGKEQELFFFHDLSPGSCFFLPR 184

Query: 272 GWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G  I+  L+ ++R +  K ++ E+ +P + +  LW+ SGHW  Y  NMF      DT   
Sbjct: 185 GAFIYNALMDFIREEYHKRNFTEVLSPNMYNSKLWETSGHWQHYSNNMFTFDVEKDT--- 241

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
              FALKPMNCPGH  +F H  +S+RE+PVR A+FG ++RNE SG+L GL RVR F QDD
Sbjct: 242 ---FALKPMNCPGHCLMFAHRPRSWREMPVRFADFGVLHRNELSGTLSGLTRVRRFQQDD 298

Query: 391 AHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENI 447
           AH+FC  EQ+  E     + + S+Y  FGF    + LSTRPE  +G   +WD+AE +
Sbjct: 299 AHIFCMVEQIEEEIKGCLHFLQSVYSTFGF-SFQLNLSTRPEHFLGEIEIWDEAERV 354


>gi|71019463|ref|XP_759962.1| hypothetical protein UM03815.1 [Ustilago maydis 521]
 gi|46099508|gb|EAK84741.1| hypothetical protein UM03815.1 [Ustilago maydis 521]
          Length = 536

 Score =  269 bits (688), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 158/433 (36%), Positives = 228/433 (52%), Gaps = 61/433 (14%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEINTPQVLDQ 302
           DHR + +   LF   E   G  F    G ++ +  +  + R + D   Y+E+ +PQ+   
Sbjct: 65  DHRSIGKAQTLFLTHESSPGTPFILPHGMRLARK-VERVVRDLYDVYGYDEVQSPQLYKT 123

Query: 303 HLWQQSGHWDSYRANMFAVKCADD----TIKDLRT-----------------------FA 335
            LW++SGHWD+YR +MFA +   +    +I D RT                       F 
Sbjct: 124 SLWKRSGHWDNYRDDMFAAEGYKERFSSSIDDRRTSCCSIHPPTSATEATAANAEDESFG 183

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC 395
           LKPMNCPGH  +F    +SYR+LP+R AEF  ++RNE SG+L GL RVR F QDDAHVFC
Sbjct: 184 LKPMNCPGHCLIFGSSERSYRDLPIRYAEFSPLHRNEASGALTGLTRVRRFHQDDAHVFC 243

Query: 396 TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTI 455
             +Q+  E   + +++ S Y  FGF    + LSTRPE  +GS   WD AE  ++  LD  
Sbjct: 244 RPDQVAVEINSMLSMLTSAYDTFGFSDFELVLSTRPESFIGSVEEWDRAEAGLRQALDA- 302

Query: 456 KNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS 515
            +  +  +N     G+GAFYGPK +  L D  GR  Q  TIQ+DF LP RF+  Y +  +
Sbjct: 303 -SGRKWEMNA----GDGAFYGPKIDIHLVDGQGRRHQTATIQLDFQLPRRFDLSYADPAA 357

Query: 516 ----EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIV---TTITSSAVEYA 568
               E+  PVMIHRA+ GS+ERF+ I+IE   G  P WLSP QAI+   TT   +  EY 
Sbjct: 358 KQTNERSVPVMIHRAILGSVERFMAILIEQTAGWWPFWLSPRQAIIIPATTNNPALTEYV 417

Query: 569 QEIANLL-------------KSHHLS-----IETDFRNETINYKIREHSIKKIPIIIICG 610
           +++   L                HL      +E++ +NE +   +R+  + +   I++ G
Sbjct: 418 EKLHKFLSLGIHPDAPPSSSSERHLQRFFVDVESNPQNEKLGKLVRKAQLARYNYILVVG 477

Query: 611 DKEASERSIGIRR 623
           +KE    +I +R+
Sbjct: 478 EKEMHTNTINVRK 490


>gi|19114946|ref|NP_594034.1| mitochondrial threonine-tRNA ligase [Schizosaccharomyces pombe
           972h-]
 gi|3183172|sp|O13969|SYTM_SCHPO RecName: Full=Probable threonyl-tRNA synthetase, mitochondrial;
           AltName: Full=Threonine--tRNA ligase; Short=ThrRS;
           Flags: Precursor
 gi|2330792|emb|CAB11266.1| mitochondrial threonine-tRNA ligase [Schizosaccharomyces pombe]
          Length = 473

 Score =  268 bits (686), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 145/407 (35%), Positives = 232/407 (57%), Gaps = 31/407 (7%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           ES   DHR +A    L+  +    G IF+   G +I+  L+ ++R + +   +EEI TP 
Sbjct: 42  ESTLNDHRTIAARQKLYTTSILTPGSIFFLPHGTRIYNRLVDFLRAQYQIHGFEEIITPL 101

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR--TFALKPMNCPGHVAVFNHGLKSYR 356
           +  + LW++SGHW +Y   +F V+ + +   +    T+ LKPMNCPGH  V+    +SY+
Sbjct: 102 IFKKDLWEKSGHWQNYEKEIFRVEESRNVEDEHSNATYGLKPMNCPGHCIVYASTERSYK 161

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ELP+R A+F  ++RNE SG+L GL R+R F QDD H+FC+ E + +E       +  +Y 
Sbjct: 162 ELPLRFADFSPLHRNEASGALSGLTRLRCFHQDDGHIFCSPESIKDEIKNTLTFVKQVYS 221

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
             G  K+ + LSTRPE+ +GS   W++AEN   G+ + ++ S +  I   +  G+GAFYG
Sbjct: 222 LLGMNKLKLYLSTRPEEHIGSLDTWNEAEN---GLREALQESGETWI---INEGDGAFYG 275

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV-----NSHSEKC--HPVMIHRAVFG 529
           PK + ++ DA G+  Q  TIQ+DFNLP RF  +Y      N+ SEK    PVMIHRA+FG
Sbjct: 276 PKIDVMVADARGKWHQTATIQLDFNLPQRFKLYYRTDAGDNAGSEKLIKQPVMIHRAIFG 335

Query: 530 SIERFIGIMIENFKGNLPLWLSPIQAIVTTI--TSSAVEYAQEIANLLKSHHLS------ 581
           S+ERF+GI+IE+  G+ P WLSP  A++  +  T   + YA+++   L +  ++      
Sbjct: 336 SLERFMGILIEHLNGHWPFWLSPRHAVILPVNQTDRILTYAKQVQKELSNQEVNESEFLP 395

Query: 582 -------IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
                  ++ +   ++I  ++RE  +      I+ G+ E  +  + +
Sbjct: 396 LNKNTYYVDINAEAQSIGKRLRESRLLNYNYEIVIGEDEVDKEILSV 442


>gi|254579094|ref|XP_002495533.1| ZYRO0B13596p [Zygosaccharomyces rouxii]
 gi|238938423|emb|CAR26600.1| ZYRO0B13596p [Zygosaccharomyces rouxii]
          Length = 454

 Score =  268 bits (685), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 145/385 (37%), Positives = 219/385 (56%), Gaps = 35/385 (9%)

Query: 264 GVIFWHRKGWKIFQTLISYMR--RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           G IF+   G KIF  LI +M+  ++ K  ++E+ TP +  + LW+QSGHWD+Y+ +MF V
Sbjct: 52  GSIFFLPNGTKIFNKLIQFMKLQQQFKYGFKEVVTPLIYRKSLWEQSGHWDNYKEDMFRV 111

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           +  D + ++   + LKPMNCPGH  VF    +SY ELP+RL++F  ++RNE SG+L GL 
Sbjct: 112 EGHDTSKEE---YGLKPMNCPGHCMVFKRFDRSYSELPLRLSDFSPLHRNEASGALSGLT 168

Query: 382 RVRGFTQDDAHVFCTKEQMFNE---CLKIHNL----IISIYKDFGFEKIMVKLSTRPEKR 434
           RVR F QDD H+FCT +Q+ +E   CLK+ ++    +  +  +   E   ++LSTRPE  
Sbjct: 169 RVRKFHQDDGHIFCTPDQVESEIAKCLKLVDMCYTKVFPLSPELANEVYTLELSTRPEHF 228

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           +G   +WD AE ++K +L+      +  +N      +GAFYGPK +  + D  G+  Q  
Sbjct: 229 IGDVKVWDYAETVLKNILNKFGKPWE--LNE----ADGAFYGPKIDIKVTDHTGKYHQVA 282

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQ 554
           TIQ+DF LP RF+  Y +  +    P+MIHRAVFGS+ERF+ I+I++  G  P WL+P Q
Sbjct: 283 TIQLDFQLPERFDLKYKDRDNTYKRPIMIHRAVFGSVERFMAILIDSNHGKWPFWLNPRQ 342

Query: 555 AIVTTITSSAVEYAQEIANL-----------------LKSHHLSIETDFRNETINYKIRE 597
           A++  + +          +L                 L S H + + D R E + Y+I++
Sbjct: 343 AMIIPVNTKRQGQVDACKDLFLKLRGQGNENSTDPIPLNSFHFNADLDERPEPVGYRIKD 402

Query: 598 HSIKKIPIIIICGDKEASERSIGIR 622
             +K    +II GDKE       IR
Sbjct: 403 ALMKNYSYLIIIGDKEVETGRYAIR 427


>gi|169621989|ref|XP_001804404.1| hypothetical protein SNOG_14207 [Phaeosphaeria nodorum SN15]
 gi|111057324|gb|EAT78444.1| hypothetical protein SNOG_14207 [Phaeosphaeria nodorum SN15]
          Length = 542

 Score =  267 bits (683), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 154/426 (36%), Positives = 229/426 (53%), Gaps = 55/426 (12%)

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHL 304
           HR LA+  +LF  +    G       G  +FQ L S++R +     ++E+ TP +  + L
Sbjct: 73  HRTLAQVHNLFITSPFSPGSPLILPNGAYVFQKLQSFLRAQYPQFGFQEVITPIIYKKSL 132

Query: 305 WQQSGHWDSYRANMFAVKCADDT-------IKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           W++SGHW++Y  +MF+V+    T       + +   F LKPMNCPGH  +F   +KSYR+
Sbjct: 133 WEKSGHWENYAEDMFSVQGRGATGQTEKAQVGEDEEFGLKPMNCPGHCLLFRDEIKSYRD 192

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R A+F +++RNE SGSL GL RVR F QDDAH+FC  +Q+  E  +    +  +Y  
Sbjct: 193 LPIRYADFSALHRNEVSGSLTGLTRVRRFHQDDAHIFCRPDQILPEIEQTLKFVGMVYNT 252

Query: 418 FGFEKIMVKLSTRPEKR-VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           FG     + LSTRP+   +G+   WD AE  +   LD+I   S+  IN     G+GAFYG
Sbjct: 253 FGLGPYKLLLSTRPKDSFIGTIEEWDRAEKQLSTALDSI--GSEWAINE----GDGAFYG 306

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE----------------KCHP 520
           PK + ILKD+ G++ Q  TIQ+DF LP RF+  Y  S  E                   P
Sbjct: 307 PKIDIILKDSNGKEHQTATIQLDFQLPQRFDLQYQASPEELEAGTQTTMDTGLDPSLRRP 366

Query: 521 VMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA-----VEYAQEIANLL 575
           VMIHRA++GSIERF+ ++IE++ G  P WLSP  A + ++ S A     +E  + + + L
Sbjct: 367 VMIHRAIYGSIERFMALLIEHYAGKYPFWLSPRPATILSLNSDANVQAHIERVKAVLSGL 426

Query: 576 KSH-------------------HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASE 616
           + H                   HL I+ D  + ++  K+ E   KK   +I+ G KEA  
Sbjct: 427 QPHDAPSTASSSSPKPLPLSTIHLPIDVDISDRSLGKKVAEARSKKYNHMIVVGGKEAEN 486

Query: 617 RSIGIR 622
            ++ ++
Sbjct: 487 DAVNLK 492


>gi|164427281|ref|XP_964988.2| threonyl-tRNA synthetase, mitochondrial precursor [Neurospora
           crassa OR74A]
 gi|157071680|gb|EAA35752.2| threonyl-tRNA synthetase, mitochondrial precursor [Neurospora
           crassa OR74A]
          Length = 498

 Score =  267 bits (683), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 152/423 (35%), Positives = 222/423 (52%), Gaps = 45/423 (10%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQH 303
           DHR L  + +LF  +    G   +   G +IF  L+ Y+R++ +   ++E+ TP +  + 
Sbjct: 55  DHRDLGTQQELFMTSIYSPGSPIFLPNGARIFNRLVEYLRKQYVHYGFQEVITPTIYKKA 114

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRT------FALKPMNCPGHVAVFNHGLKSYRE 357
           LW +SGH ++Y  +MF V     +  D+        + LKPMNCPGH  +F    +SYR+
Sbjct: 115 LWAKSGHLENYADDMFTVTSTSPSRADVTEAGEADEYGLKPMNCPGHCLIFAAQKRSYRD 174

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R A+F  ++RNE SG+L GL RVR F QDD H+FC   Q+ +E  K    I  +YKD
Sbjct: 175 LPIRYADFSPLHRNEISGALSGLTRVRRFHQDDGHIFCRPNQIEDEISKTLEFIRRVYKD 234

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD-RINTGVLLGEGAFYG 476
           F      +KLSTRPE  +GS   W+ AE  +K  LD   NS +   +N     G+GAFYG
Sbjct: 235 FRLGSYRLKLSTRPENHIGSLEDWEHAEGSLKRALD---NSGEPWTLNE----GDGAFYG 287

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE------------------KC 518
           PK + ILKD+ G++ Q  TIQ+DF LP RF   Y     E                    
Sbjct: 288 PKIDVILKDSDGKEHQTATIQLDFQLPKRFELEYQAPAPELEAKGETTTDPELLAVSGPV 347

Query: 519 HPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSS--AVEYAQEIANLL- 575
            PVMIHRAV GS ER   ++IE++ G  P WL+P Q IV T+  S   +++A+    +L 
Sbjct: 348 RPVMIHRAVLGSAERMFALLIEHYNGKWPFWLNPRQGIVLTVNDSEPVLQFARNTQKVLL 407

Query: 576 ---------KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS 626
                        L+++ D    +++ KIRE   K   +II+ G K+ +  ++ +   G 
Sbjct: 408 GTDSADVHVSPSGLAVDLDDSARSLSLKIREAKTKGYGMIIVVGPKDIANGTVTVDATGG 467

Query: 627 TTT 629
             T
Sbjct: 468 LQT 470


>gi|145529361|ref|XP_001450469.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124418080|emb|CAK83072.1| unnamed protein product [Paramecium tetraurelia]
          Length = 769

 Score =  267 bits (682), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 138/344 (40%), Positives = 205/344 (59%), Gaps = 14/344 (4%)

Query: 171 VTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQE 230
            T Y+ G   DLC GPH+ +T  VK F ++ K + AYW G +    L R+YG ++ +++ 
Sbjct: 95  TTAYKCGNLIDLCTGPHLPNTSYVKAF-QVTKNSAAYWLGKNTNDDLQRVYGVSFPSKKL 153

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-D 289
           L +Y+   +E   RDHR + ++ +L+   +   G  F++  G  I+ TL++++RR+    
Sbjct: 154 LDEYVKIQKELALRDHRNVGKKQNLYLFHQLSPGSAFFYPSGAHIYNTLMNFLRRQYYIR 213

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
            Y+E+ +P + +  LW+ SGH+D Y+ N+F +   ++       + LKPMNCPGH  +F+
Sbjct: 214 GYQEVISPNIFNAQLWKISGHYDKYKENLFFINMGEEG-----EYGLKPMNCPGHCLMFD 268

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
               SYR+LPVR A+FG ++RNE  G+L GL RVR F QDDAH+FC  +Q+  E     +
Sbjct: 269 MIQHSYRDLPVRFADFGVLHRNEVHGALSGLTRVRRFQQDDAHIFCRMDQIQEEIKSCLD 328

Query: 410 LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL 469
            +  IY  FGFE   + LSTRPEK +G+  +WD+AE  ++  L       +      V  
Sbjct: 329 FLSYIYSLFGFE-FKLYLSTRPEKFLGTKEVWDNAEYQLEQGLKKFGKPFE------VNP 381

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS 513
           G+GAFYGPK +  L DA  R+ QCGTIQ+DFNLP RFN  Y  S
Sbjct: 382 GDGAFYGPKIDVKLYDAYKREHQCGTIQLDFNLPERFNLQYRAS 425



 Score = 74.3 bits (181), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 71/131 (54%), Gaps = 5/131 (3%)

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH 579
           PV++HRA+ GS+ER I ++ E   G  P WLSP Q ++  +++   + A++IA  L+   
Sbjct: 557 PVIVHRAILGSLERMIAVLTEQCGGKWPFWLSPKQLVLCPVSAYYKDVAEKIAARLRLEG 616

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
            ++ TD  ++T+  K+R   I+    + + G++E     I +R     T  ++  L  IP
Sbjct: 617 YTVTTDEADQTLAKKVRNAQIQYFNFVGVIGEEEVKAGVIDVRDCEKNT--RIGKL-TIP 673

Query: 640 ILTK--ESLPP 648
            L K  ESL P
Sbjct: 674 QLCKFFESLKP 684


>gi|38567275|emb|CAE76565.1| related to threonine--tRNA ligase [Neurospora crassa]
          Length = 497

 Score =  266 bits (681), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 152/423 (35%), Positives = 222/423 (52%), Gaps = 45/423 (10%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQH 303
           DHR L  + +LF  +    G   +   G +IF  L+ Y+R++ +   ++E+ TP +  + 
Sbjct: 54  DHRDLGTQQELFMTSIYSPGSPIFLPNGARIFNRLVEYLRKQYVHYGFQEVITPTIYKKA 113

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRT------FALKPMNCPGHVAVFNHGLKSYRE 357
           LW +SGH ++Y  +MF V     +  D+        + LKPMNCPGH  +F    +SYR+
Sbjct: 114 LWAKSGHLENYADDMFTVTSTSPSRADVTEAGEADEYGLKPMNCPGHCLIFAAQKRSYRD 173

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R A+F  ++RNE SG+L GL RVR F QDD H+FC   Q+ +E  K    I  +YKD
Sbjct: 174 LPIRYADFSPLHRNEISGALSGLTRVRRFHQDDGHIFCRPNQIEDEISKTLEFIRRVYKD 233

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD-RINTGVLLGEGAFYG 476
           F      +KLSTRPE  +GS   W+ AE  +K  LD   NS +   +N     G+GAFYG
Sbjct: 234 FRLGSYRLKLSTRPENHIGSLEDWEHAEGSLKRALD---NSGEPWTLNE----GDGAFYG 286

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE------------------KC 518
           PK + ILKD+ G++ Q  TIQ+DF LP RF   Y     E                    
Sbjct: 287 PKIDVILKDSDGKEHQTATIQLDFQLPKRFELEYQAPAPELEAKGETTTDPELLAVSGPV 346

Query: 519 HPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSS--AVEYAQEIANLL- 575
            PVMIHRAV GS ER   ++IE++ G  P WL+P Q IV T+  S   +++A+    +L 
Sbjct: 347 RPVMIHRAVLGSAERMFALLIEHYNGKWPFWLNPRQGIVLTVNDSEPVLQFARNTQKVLL 406

Query: 576 ---------KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS 626
                        L+++ D    +++ KIRE   K   +II+ G K+ +  ++ +   G 
Sbjct: 407 GTDSADVHVSPSGLAVDLDDSARSLSLKIREAKTKGYGMIIVVGPKDIANGTVTVDATGG 466

Query: 627 TTT 629
             T
Sbjct: 467 LQT 469


>gi|73981323|ref|XP_860781.1| PREDICTED: similar to threonyl-tRNA synthetase-like 1 isoform 5
           [Canis familiaris]
          Length = 636

 Score =  266 bits (679), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 138/355 (38%), Positives = 199/355 (56%), Gaps = 27/355 (7%)

Query: 282 YMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK-------------CADDTI 328
           Y RR     + E+ TP +    LW+ SGHW+ Y+ +MF ++             C+    
Sbjct: 261 YTRR----GFSEVKTPTLFSAKLWELSGHWEHYQEDMFVLQPPGSDRLASSLSVCSTSHS 316

Query: 329 KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQ 388
            D  T ALKPMNCP H  +F H  +S+RELP+RLA+FG ++R E SGSL GL R+R F Q
Sbjct: 317 TD--TLALKPMNCPAHCLMFAHRPRSWRELPLRLADFGVLHRAEASGSLGGLTRLRCFQQ 374

Query: 389 DDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIM 448
           DDAH+FC  +Q+  E     + + S+Y   GF    + LSTRP   +G   LWD AE ++
Sbjct: 375 DDAHIFCAPDQLEEEIQGCLDFLRSVYAVLGF-SFRLALSTRPSGFLGESCLWDQAEQVL 433

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
           +  L+        +       G+GAFYGPK +  L DA+GR  QCGTIQ+DF LP RF+ 
Sbjct: 434 QRALEEFGEPWDLKP------GDGAFYGPKIDVHLHDALGRPHQCGTIQLDFQLPLRFDL 487

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYA 568
            Y         PV+IHRAV GS+ER +G++ E++ G  PLWLSP Q +V  + +   EYA
Sbjct: 488 QYKGQAGVLERPVLIHRAVLGSVERMLGVLAESYGGKWPLWLSPFQVVVIPVGAEQEEYA 547

Query: 569 QEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           +E    L++  L  + D  +  T++ ++R   +       + G KE S++++ IR
Sbjct: 548 REAQQRLQAAGLVCDLDADSGLTLSRRVRRAQLAHYNFQFVVGQKEQSKKTVNIR 602



 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 102/194 (52%), Gaps = 7/194 (3%)

Query: 5   IKLTFPDGS-IKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEII 62
           IK+T P G  +     + T   +A+ +S ++A   VA  +NG++ DL  P+   S ++ +
Sbjct: 61  IKITLPGGQKVDAVAWNTTPYQLAQQMSSTVADTVVAAQVNGELYDLERPLETDSDLKFL 120

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF--DKEQPFSSDELA 120
           T       AV  HS  H++  A + +   V +  GP  E GFY+DF   KE+     EL 
Sbjct: 121 TFSSAEGKAVFWHSSTHVLGAAAEQLLGAV-LCRGPSTECGFYHDFFLGKERTVRGSELP 179

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            +E+  QE++A   PF +  +S ++ R+LF  K   +K+ ++E        T+Y  G   
Sbjct: 180 ALEQICQELVAAAHPFRRLEVSQDQLRQLF--KDNPFKLRLIEEKVTGPTATVYGCGMLV 237

Query: 181 DLCRGPHVRSTGQV 194
           DLCRGPH+R TGQ+
Sbjct: 238 DLCRGPHLRHTGQI 251


>gi|282898000|ref|ZP_06305995.1| Threonyl-tRNA synthetase, class IIa [Raphidiopsis brookii D9]
 gi|281197144|gb|EFA72045.1| Threonyl-tRNA synthetase, class IIa [Raphidiopsis brookii D9]
          Length = 332

 Score =  266 bits (679), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 132/327 (40%), Positives = 192/327 (58%), Gaps = 16/327 (4%)

Query: 318 MFAVKCADDTIKDL-RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
           MF +   ++  K L + F LKPMNCP H+ ++   L+SYRELP+RLAEFG+VYR E SG 
Sbjct: 1   MFPMMAENEESKALDQGFVLKPMNCPFHIQIYKSELRSYRELPMRLAEFGTVYRYEQSGE 60

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR---PEK 433
           L GL RVRGFT DD+H+F T EQ+  E L + +LI+++++    +    +LS R    +K
Sbjct: 61  LGGLTRVRGFTVDDSHLFVTPEQLDGEFLNVVDLILTVFRSLQLKNFKARLSFRDPTSDK 120

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
            +G D +WD AE  ++     ++    D       +GE AFYGPK ++I  D + R+WQ 
Sbjct: 121 YIGGDEVWDKAEGAIR---RAVQQLGMDHFEG---IGEAAFYGPKLDFIFSDVLEREWQL 174

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI 553
           GT+QVD+NLP RF+  YV     +  PVMIHRA FGS+ER IGI+IE + G+ PLWL+P+
Sbjct: 175 GTVQVDYNLPERFDLEYVAEDGSRKRPVMIHRAPFGSLERLIGILIEEYAGDFPLWLAPV 234

Query: 554 QAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
           Q  +  +    +E+ +EIA  +    +  + D   + +   IR     KIP++ + G KE
Sbjct: 235 QIRLLPVGEQQIEFTKEIARKMTELGIRAQADLSGDRLAKLIRNGEKDKIPVMAVVGAKE 294

Query: 614 ASERSIGIRRFGSTTTQKVSLLDAIPI 640
               S+ IR      T+    L  IP+
Sbjct: 295 VETNSLSIR------TRASGELGVIPV 315


>gi|149244270|ref|XP_001526678.1| threonyl-tRNA synthetase, mitochondrial precursor [Lodderomyces
           elongisporus NRRL YB-4239]
 gi|146449072|gb|EDK43328.1| threonyl-tRNA synthetase, mitochondrial precursor [Lodderomyces
           elongisporus NRRL YB-4239]
          Length = 486

 Score =  265 bits (678), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 147/405 (36%), Positives = 218/405 (53%), Gaps = 50/405 (12%)

Query: 264 GVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK 322
           G IF+   G +I   LI +M+ ++IK  + E+ TP +    LW++SGHWD+Y+ +MF V 
Sbjct: 59  GSIFFLPHGTRILNKLIQFMKNQQIKYGFHEVVTPLIFKTKLWKKSGHWDNYKDDMFKVV 118

Query: 323 CADDTIKDL-----------------------------RTFALKPMNCPGHVAVFNHGLK 353
             D + +++                               + LKPMNCPGH  +F+   +
Sbjct: 119 GNDKSKEEVVVVLAPTVQSESLTDDGNDSALQEAFEEEHEYGLKPMNCPGHCMIFSKFER 178

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SY ELP+R ++F S++RNE SG+L GL RVR F QDD H+FC    +  E     NLI  
Sbjct: 179 SYNELPIRYSDFSSLHRNEASGALSGLTRVRRFHQDDGHIFCDMSHIDQEIANTLNLIKD 238

Query: 414 IYKDFGFEKIMVKLSTRP-EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
            Y  FG +KI   LSTRP EK +G    WD AE  +K VLD     S  + N  V  G+G
Sbjct: 239 TYSIFGIDKIEYYLSTRPEEKYIGEIETWDAAELKLKQVLD----RSAGKGNWQVREGDG 294

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH-SEKCHPVMIHRAVFGSI 531
           AFYGPK + +L DA G+  Q  TIQ+DF LP RF+  Y++   S    P++IHRAVFGS+
Sbjct: 295 AFYGPKIDVLLTDAFGKKHQVATIQLDFQLPKRFDLKYISEDGSRNNQPILIHRAVFGSL 354

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI--------------ANLLKS 577
           ERF  I++++++G  P W++P QAI+  +  +    A+E+               + L  
Sbjct: 355 ERFFAILLDHYQGKWPFWINPRQAIIIPVNETHTARAEELQRKLCGDIINTNDPVSPLTG 414

Query: 578 HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           ++  ++ D R  TI  + ++   K    +II GDK+ +  +  +R
Sbjct: 415 YNFHVDVDKRPATIGMRTKDAIQKGYSYLIIIGDKDIANGTYAVR 459


>gi|50286281|ref|XP_445569.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49524874|emb|CAG58480.1| unnamed protein product [Candida glabrata]
          Length = 462

 Score =  265 bits (678), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 154/426 (36%), Positives = 240/426 (56%), Gaps = 41/426 (9%)

Query: 247 RKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEINTPQVLDQHL 304
           ++++    LF   +   G  F+   G KI+  L+S+M+ + K    ++E+ TP +  + L
Sbjct: 40  QEVSNRQRLFITDQITPGSAFFLPNGTKIYNKLVSFMKTQQKHLFGFKEVITPLIYRKSL 99

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W+QSGHW++Y+ +MF V+  D T ++   + LKPMNCPGH  +FN    SY +LP+R ++
Sbjct: 100 WEQSGHWENYKEDMFRVEGNDLTKEE---YGLKPMNCPGHCVIFNRFDHSYNDLPIRYSD 156

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE---CLKIHNLI------ISIY 415
           F  ++RNE SG+L GL RVR F QDD H+FCT +Q+  E   CLK+ ++       IS  
Sbjct: 157 FSPLHRNEASGALSGLTRVRMFHQDDGHIFCTPDQVEVEILNCLKLVDMCYTKVFPISGE 216

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           +    +   + LSTRPE  +G    WD AE +++ VL+  K+S   ++N G    +GAFY
Sbjct: 217 QSKSKDSYEIHLSTRPEHYIGELESWDHAEEVLRSVLE--KSSKPWKLNAG----DGAFY 270

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK + ++KD  G+  Q  TIQ+DF LP RFN  Y +  +    P+MIHRAV GS+ERF+
Sbjct: 271 GPKLDIMVKDHHGKQHQVATIQLDFQLPQRFNLRYKDRDNSYKRPIMIHRAVLGSVERFM 330

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSS---AVEYAQEIANLLKSH-------------H 579
            +++E+  G  P WL+P QAIV  + ++    V+ A+++ + L+               H
Sbjct: 331 AMLVESNGGKWPFWLNPNQAIVIPLNTNNEEQVKMAKQLHDKLRGKLEIEDNLKPVPISH 390

Query: 580 LS--IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
           +S   + D R E + Y+I++   K    +II GD E   +   +R   + T     L+D 
Sbjct: 391 VSYNADIDIRAEPVGYRIKDAITKNYSYLIIVGDNEVKAQKFSVRTRENRTP---VLMDT 447

Query: 638 IPILTK 643
             IL K
Sbjct: 448 NEILEK 453


>gi|6322654|ref|NP_012727.1| Mst1p [Saccharomyces cerevisiae S288c]
 gi|549032|sp|P07236|SYTM_YEAST RecName: Full=Threonyl-tRNA synthetase, mitochondrial; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS; Flags:
           Precursor
 gi|486345|emb|CAA82038.1| MST1 [Saccharomyces cerevisiae]
 gi|285813075|tpg|DAA08972.1| TPA: Mst1p [Saccharomyces cerevisiae S288c]
          Length = 462

 Score =  265 bits (678), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 141/402 (35%), Positives = 223/402 (55%), Gaps = 37/402 (9%)

Query: 249 LAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR--RKIKDDYEEINTPQVLDQHLWQ 306
           +++  DLF       G +F+   G KIF  LI +M+  +K K  + E+ TP +  + LW+
Sbjct: 42  VSQRQDLFMTDPLSPGSMFFLPNGAKIFNKLIEFMKLQQKFKFGFNEVVTPLIYKKTLWE 101

Query: 307 QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFG 366
           +SGHW++Y  +MF V+  D+  ++   + LKPMNCPGH  +F    +SY ELP+R ++F 
Sbjct: 102 KSGHWENYADDMFKVETTDEEKEE---YGLKPMNCPGHCLIFGKKDRSYNELPLRFSDFS 158

Query: 367 SVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY-KDFGFEK--- 422
            ++RNE SG+L GL R+R F QDD H+FCT  Q+ +E      LI  +Y K F F K   
Sbjct: 159 PLHRNEASGALSGLTRLRKFHQDDGHIFCTPSQVKSEIFNSLKLIDIVYNKIFPFVKGGS 218

Query: 423 -----IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
                  +  STRP+  +G   +W+ AE ++K +L+  ++    ++N G    +GAFYGP
Sbjct: 219 GAESNYFINFSTRPDHFIGDLKVWNHAEQVLKEILE--ESGKPWKLNPG----DGAFYGP 272

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K + ++ D + +  Q  TIQ+DF LP RF+  + +  +    P+MIHRA FGSIERF+ +
Sbjct: 273 KLDIMVTDHLRKTHQVATIQLDFQLPERFDLKFKDQDNSYKRPIMIHRATFGSIERFMAL 332

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANL-----------------LKSHHL 580
           +I++ +G  P WL+P QA++  + +  V+       L                 L   H 
Sbjct: 333 LIDSNEGRWPFWLNPYQAVIIPVNTKNVQQLDMCTALQKKLRNELEADDMEPVPLNDWHF 392

Query: 581 SIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           +++ D RNE + Y+I+   +K    +II GD+E   +   IR
Sbjct: 393 NVDLDIRNEPVGYRIKSAILKNYSYLIIVGDEEVQLQKYNIR 434


>gi|151941725|gb|EDN60086.1| mitochondrial aminoacyl-tRNA synthetase, threonine [Saccharomyces
           cerevisiae YJM789]
 gi|190409649|gb|EDV12914.1| threonyl-tRNA synthetase, mitochondrial precursor [Saccharomyces
           cerevisiae RM11-1a]
 gi|323304221|gb|EGA57996.1| Mst1p [Saccharomyces cerevisiae FostersB]
 gi|323308307|gb|EGA61553.1| Mst1p [Saccharomyces cerevisiae FostersO]
 gi|323332690|gb|EGA74095.1| Mst1p [Saccharomyces cerevisiae AWRI796]
 gi|323354220|gb|EGA86064.1| Mst1p [Saccharomyces cerevisiae VL3]
          Length = 462

 Score =  265 bits (677), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 141/402 (35%), Positives = 223/402 (55%), Gaps = 37/402 (9%)

Query: 249 LAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR--RKIKDDYEEINTPQVLDQHLWQ 306
           +++  DLF       G +F+   G KIF  LI +M+  +K K  + E+ TP +  + LW+
Sbjct: 42  VSQRQDLFMTDPLSPGSMFFLPNGAKIFNKLIEFMKLQQKFKFGFNEVVTPLIYKKTLWE 101

Query: 307 QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFG 366
           +SGHW++Y  +MF V+  D+  ++   + LKPMNCPGH  +F    +SY ELP+R ++F 
Sbjct: 102 KSGHWENYADDMFKVETTDEEKEE---YGLKPMNCPGHCLIFGKKDRSYNELPLRFSDFS 158

Query: 367 SVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY-KDFGFEK--- 422
            ++RNE SG+L GL R+R F QDD H+FCT  Q+ +E      LI  +Y K F F K   
Sbjct: 159 PLHRNEASGALSGLTRLRKFHQDDGHIFCTPSQVKSEIFNSLKLIDIVYNKIFPFVKGGS 218

Query: 423 -----IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
                  +  STRP+  +G   +W+ AE ++K +L+  ++    ++N G    +GAFYGP
Sbjct: 219 GAESNYFINFSTRPDHFIGDLKVWNHAEQVLKEILE--ESGKPWKLNPG----DGAFYGP 272

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K + ++ D + +  Q  TIQ+DF LP RF+  + +  +    P+MIHRA FGSIERF+ +
Sbjct: 273 KLDIMVTDHLRKTHQVATIQLDFQLPERFDLKFKDQDNSYKRPIMIHRATFGSIERFMAL 332

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANL-----------------LKSHHL 580
           +I++ +G  P WL+P QA++  + +  V+       L                 L   H 
Sbjct: 333 LIDSNEGRWPFWLNPYQAVIIPVNTKNVQQLDMCTALQKKLRNEREADDMEPVPLNDWHF 392

Query: 581 SIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           +++ D RNE + Y+I+   +K    +II GD+E   +   IR
Sbjct: 393 NVDLDIRNEPVGYRIKSAILKNYSYLIIVGDEEVQLQKYNIR 434


>gi|323336851|gb|EGA78113.1| Mst1p [Saccharomyces cerevisiae Vin13]
 gi|323347699|gb|EGA81963.1| Mst1p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 462

 Score =  265 bits (677), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 141/402 (35%), Positives = 223/402 (55%), Gaps = 37/402 (9%)

Query: 249 LAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR--RKIKDDYEEINTPQVLDQHLWQ 306
           +++  DLF       G +F+   G KIF  LI +M+  +K K  + E+ TP +  + LW+
Sbjct: 42  VSQRQDLFMTDPLSPGSMFFLPNGAKIFNKLIEFMKLQQKFKFGFNEVVTPLIYKKTLWE 101

Query: 307 QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFG 366
           +SGHW++Y  +MF V+  D+  ++   + LKPMNCPGH  +F    +SY ELP+R ++F 
Sbjct: 102 KSGHWENYADDMFKVETTDEEKEE---YGLKPMNCPGHCLIFGKKDRSYNELPLRFSDFS 158

Query: 367 SVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY-KDFGFEK--- 422
            ++RNE SG+L GL R+R F QDD H+FCT  Q+ +E      LI  +Y K F F K   
Sbjct: 159 PLHRNEASGALSGLTRLRKFHQDDGHIFCTPSQVKSEIFNSLKLIDIVYNKIFPFVKGGS 218

Query: 423 -----IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
                  +  STRP+  +G   +W+ AE ++K +L+  ++    ++N G    +GAFYGP
Sbjct: 219 GAESNYFINFSTRPDHFIGDLKVWNHAEQVLKEILE--ESGKPWKLNPG----DGAFYGP 272

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K + ++ D + +  Q  TIQ+DF LP RF+  + +  +    P+MIHRA FGSIERF+ +
Sbjct: 273 KLDIMVTDHLRKTHQVATIQLDFQLPERFDLKFKDQDNSYKRPIMIHRATFGSIERFMAL 332

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANL-----------------LKSHHL 580
           +I++ +G  P WL+P QA++  + +  V+       L                 L   H 
Sbjct: 333 LIDSNEGRWPFWLNPYQAVIIPVNTKNVQQLDMCTALQKKLRNEREADDMEPVPLNDWHF 392

Query: 581 SIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           +++ D RNE + Y+I+   +K    +II GD+E   +   IR
Sbjct: 393 NVDLDIRNEPVGYRIKSAILKNYSYLIIVGDEEVQLQKYNIR 434


>gi|259147648|emb|CAY80898.1| Mst1p [Saccharomyces cerevisiae EC1118]
          Length = 462

 Score =  265 bits (677), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 141/402 (35%), Positives = 223/402 (55%), Gaps = 37/402 (9%)

Query: 249 LAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR--RKIKDDYEEINTPQVLDQHLWQ 306
           +++  DLF       G +F+   G KIF  LI +M+  +K K  + E+ TP +  + LW+
Sbjct: 42  VSQRQDLFMTDPLSPGSMFFLPNGAKIFNKLIEFMKLQQKFKFGFNEVVTPLIYKKTLWE 101

Query: 307 QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFG 366
           +SGHW++Y  +MF V+  D+  ++   + LKPMNCPGH  +F    +SY ELP+R ++F 
Sbjct: 102 KSGHWENYADDMFKVETTDEEKEE---YGLKPMNCPGHCLIFGKKDRSYNELPLRFSDFS 158

Query: 367 SVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY-KDFGFEK--- 422
            ++RNE SG+L GL R+R F QDD H+FCT  Q+ +E      LI  +Y K F F K   
Sbjct: 159 PLHRNEASGALSGLTRLRKFHQDDGHIFCTPSQVKSEIFNSLKLIDIVYNKIFPFVKGGS 218

Query: 423 -----IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
                  +  STRP+  +G   +W+ AE ++K +L+  ++    ++N G    +GAFYGP
Sbjct: 219 GAESNYFINFSTRPDHFIGDLKVWNHAEQVLKEILE--ESGKPWKLNPG----DGAFYGP 272

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K + ++ D + +  Q  TIQ+DF LP RF+  + +  +    P+MIHRA FGSIERF+ +
Sbjct: 273 KLDIMVTDHLRKTHQVATIQLDFQLPERFDLKFKDQDNSYKRPIMIHRATFGSIERFMAL 332

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANL-----------------LKSHHL 580
           +I++ +G  P WL+P QA++  + +  V+       L                 L   H 
Sbjct: 333 LIDSNEGRWPFWLNPYQAVIIPVNTKNVQQLDMCTALQKKLRNEREADDMEPVPLNDWHF 392

Query: 581 SIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           +++ D RNE + Y+I+   +K    +II GD+E   +   IR
Sbjct: 393 NVDLDIRNEPVGYRIKSAILKNYSYLIIVGDEEVQLQKYNIR 434


>gi|297294085|ref|XP_001089812.2| PREDICTED: threonyl-tRNA synthetase, cytoplasmic-like, partial
           [Macaca mulatta]
          Length = 400

 Score =  263 bits (673), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 131/286 (45%), Positives = 182/286 (63%), Gaps = 14/286 (4%)

Query: 288 KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
           K  ++E+ TP + +  LW  SGHW  Y  NMF+ +   +       FALKPMNCPGH  +
Sbjct: 98  KRGFQEVVTPNIFNSRLWMTSGHWQHYSENMFSFEVEKEL------FALKPMNCPGHCLM 151

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
           F+H  +S+RELP+RLA+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E    
Sbjct: 152 FDHRPRSWRELPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDEIKGC 211

Query: 408 HNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGV 467
            + + ++Y  FGF    + LSTRPEK +G   +WD AE  ++  L+      +  +N+  
Sbjct: 212 LDFLRTVYSVFGF-SFKLNLSTRPEKFLGDIEVWDQAEKQLENSLNEFGEKWE--LNS-- 266

Query: 468 LLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRA 526
             G+GAFYGPK +  +KDAIGR  QC TIQ+DF LP RFN  YV+    +K  PV++HRA
Sbjct: 267 --GDGAFYGPKIDIQIKDAIGRYHQCATIQLDFQLPIRFNLTYVSHDGDDKKRPVIVHRA 324

Query: 527 VFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIA 572
           + GS+ER I I+ EN+ G  P WLSP Q +V  +  +  EYAQ+++
Sbjct: 325 ILGSVERMIAILTENYGGKWPFWLSPRQVMVVPVGPTCDEYAQKVS 370


>gi|172012|gb|AAA34808.1| thr-tRNA-synthetase [Saccharomyces cerevisiae]
          Length = 462

 Score =  263 bits (671), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 140/402 (34%), Positives = 222/402 (55%), Gaps = 37/402 (9%)

Query: 249 LAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR--RKIKDDYEEINTPQVLDQHLWQ 306
           +++  DLF       G +F+   G KIF  LI +M+  +K K  + E+ TP +  + LW+
Sbjct: 42  VSQRQDLFMTDPLSPGSMFFLPNGAKIFNKLIEFMKLQQKFKFGFNEVVTPLIYKKTLWE 101

Query: 307 QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFG 366
           +SGHW++Y  +MF V+  D+  ++   + LKPMNCPGH  +F    +SY ELP+R ++F 
Sbjct: 102 KSGHWENYADDMFKVETTDEEKEE---YGLKPMNCPGHCLIFGKKDRSYNELPLRFSDFS 158

Query: 367 SVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY-KDFGFEK--- 422
            ++RNE SG+L GL R+R F QDD H+FCT  Q+ +E      LI  +Y K F F K   
Sbjct: 159 PLHRNEASGALSGLTRLRKFHQDDGHIFCTPSQVKSEIFNSLKLIDIVYNKIFPFVKGGS 218

Query: 423 -----IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
                  +  STRP+  +G   +W+ AE ++K +L+  ++    ++N      +GAFYGP
Sbjct: 219 GAESNYFINFSTRPDHFIGDLKVWNHAEQVLKEILE--ESGKPWKLNPS----DGAFYGP 272

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K + ++ D + +  Q  TIQ+DF LP RF+  + +  +    P+MIHRA FGSIERF+ +
Sbjct: 273 KLDIMVTDHLRKTHQVATIQLDFQLPERFDLKFKDQDNSYKRPIMIHRATFGSIERFMAL 332

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANL-----------------LKSHHL 580
           +I++ +G  P WL+P QA++  + +  V+       L                 L   H 
Sbjct: 333 LIDSNEGRWPFWLNPYQAVIIPVNTKNVQQLDMCTALQKKLRNELEADDMEPVPLNDWHF 392

Query: 581 SIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           +++ D RNE + Y+I+   +K    +II GD+E   +   IR
Sbjct: 393 NVDLDIRNEPVGYRIKSAILKNYSYLIIVGDEEVQLQKYNIR 434


>gi|255714212|ref|XP_002553388.1| KLTH0D15620p [Lachancea thermotolerans]
 gi|238934768|emb|CAR22950.1| KLTH0D15620p [Lachancea thermotolerans]
          Length = 453

 Score =  262 bits (669), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 149/415 (35%), Positives = 234/415 (56%), Gaps = 34/415 (8%)

Query: 249 LAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR--RKIKDDYEEINTPQVLDQHLWQ 306
           ++ +  LF       G +F+   G KIF  L+++M+  ++ K  ++E+ TP +  + LW+
Sbjct: 37  VSAKQQLFMTDPVSPGSVFFLPNGTKIFNKLVNFMKLQQQNKFGFQEVITPLIYRKSLWE 96

Query: 307 QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFG 366
           QSGHW++Y+ +MF V+  D   ++   + LKPMNCPGH  VF    +SY ELP+R ++F 
Sbjct: 97  QSGHWENYKEDMFRVEGQDLQKEE---YGLKPMNCPGHCMVFKRFARSYNELPLRYSDFS 153

Query: 367 SVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE---CLKIHNLIISIYKDFGFEKI 423
            ++RNE SG+L GL RVR F QDD H+FC  EQ+ +E   C+K+ +L  +     G    
Sbjct: 154 PLHRNEASGALSGLTRVRKFHQDDGHIFCIPEQVESEITKCIKMLDLCYTKVFPLGRGNT 213

Query: 424 ----MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
                ++LSTRPE  VG  ++W+ AE I++G+L+  K+     IN G    +GAFYGPK 
Sbjct: 214 PTDYELRLSTRPEHYVGDVSVWNHAEAILEGILN--KSGKVWSINAG----DGAFYGPKI 267

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           + +L D   +  Q  TIQ+DF LP RF+  Y +  +    P+MIHRAVFGS+ERF+ ++I
Sbjct: 268 DVLLADHNNKQHQVATIQLDFQLPERFDLKYKDKDNTFKRPIMIHRAVFGSVERFMAMLI 327

Query: 540 ENFKGNLPLWLSPIQAIVTTITS---SAVEYAQEIANLLK-------------SHHLSIE 583
           ++ +G  P WL+P Q ++  + +   + V  A ++A  L+             S H +++
Sbjct: 328 DSNEGKWPFWLNPHQCMIVPLNTKNEALVHKANDLARALRGEDTPADEPVKLNSFHFNVD 387

Query: 584 TDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
            D R E   Y+I+E   K    +I+ G KE       IR   S   + ++L + I
Sbjct: 388 IDDRAEPTGYRIKEAIEKNYSFLIMVGTKEIESGKYAIRTRESRDLEHLTLDEII 442


>gi|189197599|ref|XP_001935137.1| threonyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187981085|gb|EDU47711.1| threonyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 542

 Score =  261 bits (667), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 153/427 (35%), Positives = 228/427 (53%), Gaps = 55/427 (12%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHR LA+  +LF  +    G       G  +FQ L S++R +     ++E+ TP +  + 
Sbjct: 72  DHRTLAQTHNLFITSPYSPGSPLILPNGAYVFQKLQSFLRAQYPQFGFQEVITPIIYKKS 131

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIK-------DLRTFALKPMNCPGHVAVFNHGLKSYR 356
           LW++SGHW++Y  +MF+V+    T +       +   F LKPMNCPGH  +F   +KSYR
Sbjct: 132 LWEKSGHWENYAEDMFSVQGRGTTAQIPEAEGGEDGEFGLKPMNCPGHCLLFRDEIKSYR 191

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +LPVRLA+F +++RNE SG+L GL RVR F QDDAH+FC  +Q+  E  +    +  +Y+
Sbjct: 192 DLPVRLADFSALHRNEISGALTGLTRVRRFHQDDAHIFCRPDQILAEIEQTLKFVAMVYR 251

Query: 417 DFGFEKIMVKLSTRPEKR-VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
            FG     + LSTRP+   +G+   WD AE  +   L+ I   S+  IN     G+GAFY
Sbjct: 252 TFGLGPYKLLLSTRPKDNFIGTVEEWDRAEEQLTTALNNI--GSEWAINE----GDGAFY 305

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE----------------KCH 519
           GPK + ILKD+ G++ Q  TIQ+DF LP RF+  Y  S  E                   
Sbjct: 306 GPKIDIILKDSNGKEHQTATIQLDFQLPQRFDLQYQASPEELEAGSQTSMDAGLDPTLRR 365

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA-----VEYAQEIANL 574
           PV++HRA++GSIERF+ ++IE++ G  P WLSP  AI+ ++ ++A     V   Q + + 
Sbjct: 366 PVIVHRAIYGSIERFMALLIEHYVGKYPFWLSPRPAIILSLNNNAEVLEHVSRVQSVLSG 425

Query: 575 LKSH-------------------HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEAS 615
           LK+                     L ++ D  +  +  KI E   KK   II+ G  E  
Sbjct: 426 LKAADPPSQVSTSSPKPLPLSTIQLPVDVDTSSRPLAKKIAEARSKKYNHIIVVGGNEVQ 485

Query: 616 ERSIGIR 622
             S+ ++
Sbjct: 486 TGSVNMQ 492


>gi|225629811|ref|ZP_03787740.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Muscidifurax
           uniraptor]
 gi|225591334|gb|EEH12445.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Muscidifurax
           uniraptor]
          Length = 260

 Score =  260 bits (664), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 127/262 (48%), Positives = 179/262 (68%), Gaps = 6/262 (2%)

Query: 5   IKLTFP-DGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           +++TF  +  +K +     G D+   +     K+A+A  +NG++ DLS  +  +  IE+I
Sbjct: 2   VRITFSTEQKVKEYSGKVIGFDI---LQPDALKEAIAFKVNGELHDLSREIEADAEIEVI 58

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
              D   L +IRH  AHIMA+AV+ ++P  Q+ IGP I+DGFYYDF   + F++D+L  I
Sbjct: 59  QLSDEAGLDIIRHDAAHIMAQAVKELFPNTQITIGPTIQDGFYYDFATGRTFTTDDLTAI 118

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EKKM+EI+  +  F+++  + ++A + F    E YKV+I+ SIP  EN+T+YRQG++ DL
Sbjct: 119 EKKMKEIVKSNHRFVREVWTRKQAIDFFSGIGEKYKVDIISSIPEGENLTVYRQGDFIDL 178

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH  STG+VK  FKLMKVAGAYWRGD+  PML RIYGTAW  + EL  YL  L+E+E
Sbjct: 179 CRGPHSPSTGRVKA-FKLMKVAGAYWRGDAKGPMLQRIYGTAWRNKDELNAYLECLKEAE 237

Query: 243 KRDHRKLAREMDLFHIAEDGSG 264
           KRDHRK+A++MDLFHI E+  G
Sbjct: 238 KRDHRKIAKDMDLFHIQEEAVG 259


>gi|330935757|ref|XP_003305117.1| hypothetical protein PTT_17864 [Pyrenophora teres f. teres 0-1]
 gi|311318063|gb|EFQ86830.1| hypothetical protein PTT_17864 [Pyrenophora teres f. teres 0-1]
          Length = 528

 Score =  259 bits (662), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 152/427 (35%), Positives = 226/427 (52%), Gaps = 55/427 (12%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHR LA+  +LF  +    G       G  +FQ L S++R +     ++E+ TP +  + 
Sbjct: 58  DHRTLAQTHNLFITSPYSPGSPLILPNGAYVFQKLQSFLRAQYPQFGFQEVITPIIYKKS 117

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIK-------DLRTFALKPMNCPGHVAVFNHGLKSYR 356
           LW++SGHW++Y  +MF+V+    T +       +   F LKPMNCPGH  +F   +KSYR
Sbjct: 118 LWEKSGHWENYAEDMFSVQGRGTTAQIPEAEGGEDGEFGLKPMNCPGHCLLFRDEIKSYR 177

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +LPVRLA+F +++RNE SG+L GL RVR F QDDAH+FC  +Q+  E  +    +  +Y+
Sbjct: 178 DLPVRLADFSALHRNEISGALTGLTRVRRFHQDDAHIFCRPDQILAEIEQTLKFVAMVYR 237

Query: 417 DFGFEKIMVKLSTRPEKR-VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
            FG     + LSTRP+   +G+   WD AE  +   L+ I   S+  IN     G+GAFY
Sbjct: 238 TFGLGPYKLLLSTRPKDSFIGTVEEWDRAEEQLTTALNNI--GSEWAINE----GDGAFY 291

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE----------------KCH 519
           GPK + ILKD+ G++ Q  TIQ+DF LP RF+  Y  S  E                   
Sbjct: 292 GPKIDIILKDSNGKEHQTATIQLDFQLPQRFDLQYQASPEELEAGSQTSMDAGLDQTLRR 351

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA-----VEYAQEIANL 574
           PV++HRA++GSIERF+ ++IE++ G  P WLSP  A + ++  +A     V   Q + + 
Sbjct: 352 PVIVHRAIYGSIERFMALLIEHYAGKYPFWLSPRPATILSLNDNAEVLEHVSRVQSVLSG 411

Query: 575 LKSH-------------------HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEAS 615
           LK+                     L ++ D  +  +  KI E   KK   II+ G  E  
Sbjct: 412 LKAADPPEQVSTSLPKPLPLSTIQLPVDVDTSSRPLAKKIAEARTKKYNHIIVVGLNEVQ 471

Query: 616 ERSIGIR 622
             S+ ++
Sbjct: 472 TGSVNMQ 478


>gi|258578341|ref|XP_002543352.1| threonyl-tRNA synthetase [Uncinocarpus reesii 1704]
 gi|237903618|gb|EEP78019.1| threonyl-tRNA synthetase [Uncinocarpus reesii 1704]
          Length = 653

 Score =  259 bits (661), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 153/422 (36%), Positives = 224/422 (53%), Gaps = 53/422 (12%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHR +    DLF  +    G   +   G  I   L++++R + +   ++E+ TP +  + 
Sbjct: 185 DHRTIGAAQDLFATSLYSPGSPLFQPNGTHILNKLLAFLRAQYRQYGFQEVLTPTIYKKS 244

Query: 304 LWQQSGHWDSYRANMFAVKCADDT-------IKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           LW+ SGHW +Y+ +M+ V+    T       I +  ++ LKPMNCPGH  +F     SYR
Sbjct: 245 LWELSGHWQNYKDDMYEVRGRGATGETTHGEIGEDESYGLKPMNCPGHCLLFKSQKWSYR 304

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +LPVR A+F  ++RNE SGSL GL RVR F QDD H+FC  +Q+  E         ++ K
Sbjct: 305 DLPVRYADFSPLHRNEVSGSLSGLTRVRRFHQDDGHIFCRPQQIGREIQLALKFTDTVMK 364

Query: 417 DFGFEKIMVKLSTRPEKR-VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
            FG  +  + LSTRPEK  +GS  LWD AE  +K  L+  K+     IN     G+GAFY
Sbjct: 365 TFGLGEYKLVLSTRPEKDFIGSLELWDAAEKQLKDALE--KSGRNWEINE----GDGAFY 418

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE---------KCHPVMIHRA 526
           GPK ++ L+D+ G+  Q  TIQ+D NLP RF   Y+    E         K  PV+IHRA
Sbjct: 419 GPKIDFQLQDSDGKFHQLSTIQLDMNLPQRFGLEYMVPEGEEDYNASTDGKGTPVLIHRA 478

Query: 527 VFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITS------SAVEYA------------ 568
           +FGS+ERF  ++IE++ G  P WLSP QAI+ T+        +A E A            
Sbjct: 479 IFGSLERFFALLIEHYNGRWPFWLSPRQAIILTVNQDDDVLKAADEAAAKMCGYQRIPFH 538

Query: 569 ---------QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSI 619
                    Q ++ L  S H++++   R  ++  KIRE  I K  +I + G K  ++ S+
Sbjct: 539 EANELEAPSQPLSPLQPSFHVTVDKSAR--SLAKKIREAQIMKYNLIFVIGPKNLADGSV 596

Query: 620 GI 621
            +
Sbjct: 597 DV 598


>gi|47221603|emb|CAF97868.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 604

 Score =  259 bits (661), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 146/436 (33%), Positives = 225/436 (51%), Gaps = 50/436 (11%)

Query: 252 EMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGH 310
           + +LF   +   G  F+  KG  I+ TL  +++ + +   + E+ TP +    LW++SGH
Sbjct: 164 DQELFFFNDVSPGSCFFLPKGAHIYNTLTDFIKGEYRRRGFTEVVTPTLYSTALWERSGH 223

Query: 311 WDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYR 370
           W+ Y  NMF V     T +   T+ALKPMNCP H  +F   ++S++ELP+R A+FG+++R
Sbjct: 224 WEHYSDNMFTV-----TSEGSHTYALKPMNCPAHCLMFEQRVRSWKELPLRWADFGALHR 278

Query: 371 NEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR 430
           NE SG+L GL RVR F QDDAH+FC  EQ+  E +   + +  +Y+ FGF      LSTR
Sbjct: 279 NELSGALGGLTRVRRFCQDDAHIFCAPEQLETEIVSCLDFVRHVYQVFGF-SFHCLLSTR 337

Query: 431 PEKRVGSDALWDDAENIM-------------------KGVLDTIKNSSQD-------RIN 464
           P   +G    WD+AE                      + +L T     +D       R +
Sbjct: 338 PTPCLGEPEQWDNAEQGAAAGEEPAAVWPTLGAEPRRRSLLWTKGEQEEDLGPGPGRRRS 397

Query: 465 TGVLLGEGA-------------FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
            G    + +                P+ +  ++DAIGR  QC TIQ+DF LP RF+  YV
Sbjct: 398 VGYFTSQSSPDEGEEGRQTRSCVLSPQIDIQIRDAIGRQHQCATIQLDFQLPLRFDLQYV 457

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
               +   PVMIHRAV GS+ER I I+ ENF G  PLWLSP Q +V  +   +  Y++++
Sbjct: 458 GPDGQLHRPVMIHRAVLGSLERMIAILAENFGGKWPLWLSPAQVMVIPVGGDSESYSKQV 517

Query: 572 ANLLKS-HHLSIETDFRNE---TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGST 627
           + +++   H     D  ++   T+N KIR   + +   I + G+KE+  R++ +R  G  
Sbjct: 518 SGVVQEFRHAGFMVDLNSDQGATLNKKIRSAQLSQYNYIFVVGEKESESRTVSVRSRGGK 577

Query: 628 TTQKVSLLDAIPILTK 643
              +    + +  LT+
Sbjct: 578 QLGRRPTEEVLTSLTQ 593


>gi|119186087|ref|XP_001243650.1| hypothetical protein CIMG_03091 [Coccidioides immitis RS]
          Length = 560

 Score =  258 bits (660), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 150/410 (36%), Positives = 214/410 (52%), Gaps = 55/410 (13%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHR +  + DLF       G  ++H  G  IF  L+S++R + K   +EE+ TP +  + 
Sbjct: 117 DHRIIGTDQDLFGSTPFSPGSPYFHPDGAHIFNKLMSFLRAQYKQYGFEEVITPTMYKKS 176

Query: 304 LWQQSGHWDSYRANMFAVK-------CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           LW++SGHW  Y+ +M+ V+         D  I +   + LKPMNCPGH  +F    +SYR
Sbjct: 177 LWEKSGHWYIYKDDMYEVRGRGATGQTVDVEIGEDEQYGLKPMNCPGHCVLFASKTRSYR 236

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
            LPVR AEF  ++RNE SGSL GL RVR F QDD H+FC  EQ+  E         S+  
Sbjct: 237 SLPVRFAEFSPLHRNEISGSLSGLTRVRRFHQDDGHIFCRPEQIEREIELTLQFTESVLS 296

Query: 417 DFGFEKIMVKLSTRPEKR-VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
            FG E   + LSTRPEK  +GS ALW+DAEN +K  LD  K+     IN     G+GAFY
Sbjct: 297 TFGLEDYRLVLSTRPEKDYLGSLALWNDAENQLKDALD--KSGKPWHINE----GDGAFY 350

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  ++D+ G+  Q  TIQ+D NLP RF                   A+FGS+ERF 
Sbjct: 351 GPKIDLQIRDSRGKYHQLSTIQLDMNLPQRFGL----------------EAIFGSLERFF 394

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITS--SAVEYAQEIANLLKSHH-------------- 579
            ++ E++ G  P WLSP Q I+ T+ +    +  AQ +A+ ++ +               
Sbjct: 395 ALLAEHYNGRWPFWLSPRQGIILTVNNDPQVLRTAQTVASGMRGYQSLTFNESEVVATPG 454

Query: 580 --------LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
                     I+ D  + ++  KIRE   +K  +I + G  + S  S+G+
Sbjct: 455 LLYPAQATFQIDVDTSSRSLGKKIREAMGRKYKLIFVIGPSDVSNGSVGV 504


>gi|295664016|ref|XP_002792560.1| threonyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
 gi|226278674|gb|EEH34240.1| threonyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
          Length = 559

 Score =  258 bits (659), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 157/450 (34%), Positives = 225/450 (50%), Gaps = 61/450 (13%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHR +    DLF  +    G   +   G  I   L S++R +     + E+ TP +  + 
Sbjct: 74  DHRVVGTAQDLFTTSVYSPGSPLFLPNGTHILNKLTSFLRAQYAQYGFREVLTPSIYKKS 133

Query: 304 LWQQSGHWDSYRANMFAVK-------CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           LW+ SGHW +Y+ +M+ V+        A+  I +  ++ LKPMNCPGH  +F     SYR
Sbjct: 134 LWEVSGHWQNYKDDMYEVRGRGASGETAEGEIGEDESYGLKPMNCPGHCLLFKSQNHSYR 193

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ELP+R A+F  ++RNE SGSL GL RVR F QDD H+FC  +Q+ +E         ++  
Sbjct: 194 ELPLRYADFSPLHRNEISGSLSGLTRVRRFHQDDGHIFCRPQQIGSEIESALRFTDTVMN 253

Query: 417 DFGFEKIMVKLSTRPEKR-VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
            FGF K  + LSTRPE+  +GS  LWD AE  ++  L+  KN     +N     G+GAFY
Sbjct: 254 TFGFNKYRLVLSTRPERDFIGSIELWDSAERQLRDALE--KNGRSWELNE----GDGAFY 307

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE---------KCHPVMIHRA 526
           GPK +  ++D+ G+  Q  TIQ+D NLP RF   Y  +  E         K  PV+IHRA
Sbjct: 308 GPKIDMQVQDSDGKFHQLSTIQLDMNLPQRFELGYAVAEGEEDYNPATPGKAMPVLIHRA 367

Query: 527 VFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA--VEYAQEIANLLKSHHL---- 580
           +FGS+ERF  ++IEN+ G  P WLSP Q I+ T++     V+ A++ A  +  + +    
Sbjct: 368 IFGSLERFFALLIENYNGRWPFWLSPRQGIILTVSQDEKLVQAAEDAATKISGYPVHRNG 427

Query: 581 -----------------------SIETDFRNETINYKIREHSIKKIPIIIICGDKEASER 617
                                   I+ D    ++  KIRE    K  +I + G+K   + 
Sbjct: 428 ELNSNSNSTAQPLKPISPAQTTFRIDVDTSARSLGKKIREAKKMKYNLIFVLGEKNLGDG 487

Query: 618 SIGIRRFGSTTT--------QKVSLLDAIP 639
           SI I   G T             SLLD  P
Sbjct: 488 SIDIDLTGLTVVGLGNSEGRTTNSLLDNTP 517


>gi|226295138|gb|EEH50558.1| threonyl-tRNA synthetase [Paracoccidioides brasiliensis Pb18]
          Length = 559

 Score =  257 bits (656), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 159/463 (34%), Positives = 228/463 (49%), Gaps = 62/463 (13%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHR +    DLF  +    G   +   G  I   L S++R +     + E+ TP +  + 
Sbjct: 74  DHRVVGTAQDLFTTSVYSPGSPLFLPNGTHILNKLTSFLRAQYAQYGFREVLTPSIYKKS 133

Query: 304 LWQQSGHWDSYRANMFAVK-------CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           LW+ SGHW +Y+ +M+ V+        A   I +  ++ LKPMNCPGH  +F     SYR
Sbjct: 134 LWEVSGHWQNYKDDMYEVRGRGASGETAKGEIGEDESYGLKPMNCPGHCLLFKSQNHSYR 193

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ELP+R A+F  ++RNE SGSL GL RVR F QDD H+FC  +Q+ +E         ++  
Sbjct: 194 ELPLRYADFSPLHRNEISGSLSGLTRVRRFHQDDGHIFCRPQQIGSEIESALRFTDTVMN 253

Query: 417 DFGFEKIMVKLSTRPEKR-VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
            FGF K  + LSTRPE+  +GS  LWD AE  ++  L+  KN     +N     G+GAFY
Sbjct: 254 TFGFNKYRLVLSTRPERDFIGSIELWDSAERQLRDALE--KNGRSWELNE----GDGAFY 307

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE---------KCHPVMIHRA 526
           GPK +  ++D+ G+  Q  TIQ+D NLP RF   Y  +  E         K  PV+IHRA
Sbjct: 308 GPKIDMQVQDSDGKFHQLSTIQLDMNLPQRFELGYAVAEGEEDYNPATPGKAMPVLIHRA 367

Query: 527 VFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA--VEYAQEIANLLKSHHL---- 580
           +FGS+ERF  ++IEN+ G  P WLSP Q I+ T++     ++ A++ A  +  + +    
Sbjct: 368 IFGSLERFFALLIENYNGRWPFWLSPRQGIILTVSQDEKLLQAAEDAATKMSGYPVHRNG 427

Query: 581 -----------------------SIETDFRNETINYKIREHSIKKIPIIIICGDKEASER 617
                                   I+ D    ++  KIRE    K  +I + G+K   + 
Sbjct: 428 ELNSNSNSTAQPLKPISPAQTTFRIDVDTSARSLGKKIREAKKMKYNLIFVLGEKNLGDG 487

Query: 618 SIGIRRFGSTTT--------QKVSLLDAIPILTKESLPPDCQK 652
           SI I   G T             SLLD  P     + PPD   
Sbjct: 488 SIDIDLTGLTVVGLGNSEGRTANSLLDNTPCWDVTN-PPDSNN 529


>gi|171687735|ref|XP_001908808.1| hypothetical protein [Podospora anserina S mat+]
 gi|170943829|emb|CAP69481.1| unnamed protein product [Podospora anserina S mat+]
          Length = 514

 Score =  257 bits (656), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 146/421 (34%), Positives = 222/421 (52%), Gaps = 40/421 (9%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQH 303
           DHR L     LF  +    G  F+   G +IF  L+S++R + ++  +EE+ TP +  + 
Sbjct: 79  DHRTLGLHQKLFTTSIYSPGSAFFLPSGTRIFNRLVSFLRNQYVRYGFEEVITPLIYKKD 138

Query: 304 LWQQSGHWDSYRANMFAVKCA-----DDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           LW +SGH ++Y  +M+ V  A     ++T +  R + LKPMNCPGH  +F+   +S+R+L
Sbjct: 139 LWAKSGHLENYAQDMYTVTGARHASPEETEETDREYGLKPMNCPGHCLIFSSQKRSFRDL 198

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R A+F  ++RNE +GSL GL RVR F QDD H+FC   Q+  E  K    +   Y   
Sbjct: 199 PIRYADFSPLHRNENTGSLTGLTRVRRFHQDDGHIFCRPVQIEEEIKKSLEFVKHTYATL 258

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           G     + LSTRPE+ +GS   W++AEN +K  LD  K+ +   +N     G+GAFYGPK
Sbjct: 259 GLGPYRLALSTRPEQYIGSLEDWENAENALKRALD--KSGTDWTVNE----GDGAFYGPK 312

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE------------------KCHP 520
            + +L+D+ G++ Q  TIQ+DF LP RF   Y+    E                     P
Sbjct: 313 IDIVLRDSHGKEHQTATIQLDFQLPKRFELEYIAPAPELEQKGETTTDPELLASFGPVRP 372

Query: 521 VMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTI--TSSAVEYAQEIANLL--- 575
           VMIHRAV GS+ER + ++IE++ G  PLWL+P Q  + T+  T   VE+A  +   L   
Sbjct: 373 VMIHRAVLGSVERLMALLIEHYDGKYPLWLNPNQIKIITLNDTEPVVEWATRVRERLLGI 432

Query: 576 -----KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
                   H +++ D     I  K  E     + +++  G  E   +S+ +     T ++
Sbjct: 433 ADGDVTPTHFAVDLDTSARPIAVKKAEAVSAGVSVVVTIGASEVEGKSLSVDMSAVTGSR 492

Query: 631 K 631
           K
Sbjct: 493 K 493


>gi|225677700|gb|EEH15984.1| threonyl-tRNA synthetase [Paracoccidioides brasiliensis Pb03]
          Length = 559

 Score =  257 bits (656), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 159/463 (34%), Positives = 228/463 (49%), Gaps = 62/463 (13%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHR +    DLF  +    G   +   G  I   L S++R +     + E+ TP +  + 
Sbjct: 74  DHRVVGTAQDLFTTSVYSPGSPLFLPNGTHILNKLTSFLRAQYAQYGFREVLTPSIYKKS 133

Query: 304 LWQQSGHWDSYRANMFAVK-------CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           LW+ SGHW +Y+ +M+ V+        A   I +  ++ LKPMNCPGH  +F     SYR
Sbjct: 134 LWEVSGHWQNYKDDMYEVRGRGASGETAKGEIGEDESYGLKPMNCPGHCLLFKSQNHSYR 193

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ELP+R A+F  ++RNE SGSL GL RVR F QDD H+FC  +Q+ +E         ++  
Sbjct: 194 ELPLRYADFSPLHRNEISGSLSGLTRVRRFHQDDGHIFCRPQQIGSEIESALRFTDTVMN 253

Query: 417 DFGFEKIMVKLSTRPEKR-VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
            FGF K  + LSTRPE+  +GS  LWD AE  ++  L+  KN     +N     G+GAFY
Sbjct: 254 TFGFNKYRLVLSTRPERDFIGSIELWDSAERQLRDALE--KNGRSWELNE----GDGAFY 307

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE---------KCHPVMIHRA 526
           GPK +  ++D+ G+  Q  TIQ+D NLP RF   Y  +  E         K  PV+IHRA
Sbjct: 308 GPKIDMQVQDSDGKFHQLSTIQLDMNLPQRFELGYAVAEGEEDYNPATPGKAMPVLIHRA 367

Query: 527 VFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA--VEYAQEIANLLKSHHL---- 580
           +FGS+ERF  ++IEN+ G  P WLSP Q I+ T++     ++ A++ A  +  + +    
Sbjct: 368 IFGSLERFFALLIENYNGRWPFWLSPRQGIILTVSQDEKLLQAAEDAATKMSGYPVHRNG 427

Query: 581 -----------------------SIETDFRNETINYKIREHSIKKIPIIIICGDKEASER 617
                                   I+ D    ++  KIRE    K  +I + G+K   + 
Sbjct: 428 ELNSNSNSTAQPLKPISPAQTTFRIDVDTSARSLGKKIREAKKMKYNLIFVLGEKNLGDG 487

Query: 618 SIGIRRFGSTTT--------QKVSLLDAIPILTKESLPPDCQK 652
           SI I   G T             SLLD  P     + PPD   
Sbjct: 488 SIDIDLTGLTVVGLGNSEGRTANSLLDNTPCWDVTN-PPDSNN 529


>gi|312217649|emb|CBX97596.1| hypothetical protein [Leptosphaeria maculans]
          Length = 829

 Score =  256 bits (654), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 154/418 (36%), Positives = 219/418 (52%), Gaps = 55/418 (13%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHR LA   DLF  +    G       G  +FQ L +++R +     +EE+ TP +  + 
Sbjct: 97  DHRTLAETHDLFITSPYSPGSPLLLPNGAYVFQKLQAFLRAQYPQFGFEEVITPIIYKKS 156

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIK-------DLRTFALKPMNCPGHVAVFNHGLKSYR 356
           LW++SGHW +Y  +MF+V+    T +       D   F LKPMNCPGH  +F   + SYR
Sbjct: 157 LWEKSGHWQNYAEDMFSVQGRGATAEIPQAEAEDNGEFGLKPMNCPGHCILFRDKVMSYR 216

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
            LPVR A+F +++RNE SG+L GL RVR F QDDAH+FC  +Q+  E  +    +  +Y 
Sbjct: 217 NLPVRYADFSALHRNEISGALTGLTRVRRFHQDDAHIFCRPDQILAEIEQTLKFVGMVYN 276

Query: 417 DFGFEKIMVKLSTRP-EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
            FG     + LSTRP E  +G+   WD AE  +   LD I   S+  +N     G+GAFY
Sbjct: 277 TFGLGPYKLLLSTRPKENFIGTIEEWDRAEAQLSTALDNI--GSEWAVNE----GDGAFY 330

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFY------VNSHSEKC----------H 519
           GPK + ILKD+ G++ Q  TIQ+DF LP RF+  Y      + + SE             
Sbjct: 331 GPKIDIILKDSNGKEHQTATIQLDFQLPQRFDLQYQASPEEIEAGSEMSMDAGLDTSLRR 390

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA-----VEYAQEIANL 574
           PVMIHRA++GSIERF+ ++IE++ G  P WLSP  AI+ ++ S       V + Q + + 
Sbjct: 391 PVMIHRAIYGSIERFMALLIEHYAGKYPFWLSPRPAIILSLNSDPKLLQHVSHIQAVLSG 450

Query: 575 LKSH-------------------HLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
           +K+                     L I+ D  +  +  KI E    K   II+ G +E
Sbjct: 451 VKASKEPVVSPPSDPKPLPLSTIQLPIDIDTSSRPLGKKIAEARTNKYNHIIVVGGRE 508


>gi|119494491|ref|XP_001264141.1| threonyl-tRNA synthetase [Neosartorya fischeri NRRL 181]
 gi|119412303|gb|EAW22244.1| threonyl-tRNA synthetase [Neosartorya fischeri NRRL 181]
          Length = 530

 Score =  256 bits (654), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 152/426 (35%), Positives = 222/426 (52%), Gaps = 46/426 (10%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQH 303
           D+R L    DLF  +    G   +   G  +   LIS++R + ++  + E+ TP +  + 
Sbjct: 65  DYRALGTAQDLFTTSIYSPGSPLFLPNGTHVINRLISFLRTQYLQYGFREVLTPTIYKRS 124

Query: 304 LWQQSGHWDSYRANMFAVKC------ADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           LW+ SGHW +Y+ +M+ VK       AD    +  ++ LKPMNCPGH  +F     SYRE
Sbjct: 125 LWEVSGHWQNYKDDMYEVKGRGATGEADGETGEDESYGLKPMNCPGHCLLFKSQNHSYRE 184

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R A+F  ++RNE SG+L GL RVR F QDD H+FC  +Q+  E       +  +   
Sbjct: 185 LPIRYADFSPLHRNEISGALSGLTRVRRFHQDDGHIFCRPQQIKGEIASALGFVDMVMTT 244

Query: 418 FGFEKIMVKLSTRPEKR-VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           FG     + LSTRPEK  +GS  LWD AE  ++  LD   NS ++     +  G+GAFYG
Sbjct: 245 FGLGPYRLVLSTRPEKDFIGSLELWDSAETQLREALD---NSGRE---WAMNEGDGAFYG 298

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE---------KCHPVMIHRAV 527
           PK +  L+D  G+  Q  TIQ+D NLP RF   Y  +  E         +  PV++HRA 
Sbjct: 299 PKIDIQLQDQAGKYHQLSTIQLDMNLPQRFGLEYQVAEGEEDYNPATPGRATPVLVHRAN 358

Query: 528 FGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITS--SAVEYAQEIA------------- 572
           FGS+ERF+ ++IE + G  P WLSP Q I+ T+    + ++ AQE A             
Sbjct: 359 FGSLERFLALLIEQYAGRWPFWLSPRQGIILTVNQDEAVLQQAQEAAAKISGFRPHVASK 418

Query: 573 -NLLKSHHLS-------IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRF 624
            N+     LS       I+ D  ++T+  KI+     K  +I I G K+ ++ SI +   
Sbjct: 419 DNVTSPKPLSSVDSTYLIDVDTSSQTLGKKIQRAKQMKYNLIFILGPKDVADSSITVDVT 478

Query: 625 GSTTTQ 630
           G   T+
Sbjct: 479 GQMQTK 484


>gi|302924192|ref|XP_003053833.1| hypothetical protein NECHADRAFT_31483 [Nectria haematococca mpVI
           77-13-4]
 gi|256734774|gb|EEU48120.1| hypothetical protein NECHADRAFT_31483 [Nectria haematococca mpVI
           77-13-4]
          Length = 485

 Score =  256 bits (653), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 151/469 (32%), Positives = 239/469 (50%), Gaps = 60/469 (12%)

Query: 209 RGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR---DHRKLAREMDLFHIAEDGSGV 265
           R  + R  L+      W     L++   + ++ EKR   DHRKL  + +LF  +    G 
Sbjct: 3   RSRTARAALTASVKRPWTCPTCLSRRRLYSQKPEKREPPDHRKLGLQQELFISSIYSPGS 62

Query: 266 IFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK-- 322
             +   G +IF  L+ ++R++ ++  +EE+ TP +  + LW +SGH ++Y  +M+AV+  
Sbjct: 63  PIFLPNGARIFNRLVDFLRKQYVRYGFEEVITPTIYKKSLWAKSGHLENYADDMYAVRGN 122

Query: 323 ----------CADDTIKDLRT-------FALKPMNCPGHVAVFNHGLKSYRELPVRLAEF 365
                     C     ++L+        + LKPMNCPGH  +F     SYR+LP+R A+F
Sbjct: 123 TEQPPAEHDGCCGSHPENLKPEDEEEGDYGLKPMNCPGHCLIFASKRHSYRDLPIRYADF 182

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF-EKIM 424
             ++RNE SG+L GL RVR F QDD H+FC   Q+  E  K  + +  +Y    F     
Sbjct: 183 SPLHRNEISGALSGLTRVRRFHQDDGHIFCRPCQVEEEIKKTLDFVKVVYTVLRFGASYR 242

Query: 425 VKLSTRPEKR-VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           + LSTRP+   +G++  W  AEN +K  LD         +  GV  G+GAFYGPK + +L
Sbjct: 243 LALSTRPKDHYIGTEEEWAQAENALKRALDA------SGMEWGVKEGDGAFYGPKIDIVL 296

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE------------------KCHPVMIHR 525
            D+ G++ Q  TIQ+DF LP RF   Y     E                     PVMIHR
Sbjct: 297 TDSDGKEHQTATIQLDFQLPKRFELEYQAPAPEYEARGETTEDPALLAEYGPVRPVMIHR 356

Query: 526 AVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA--VEYAQEIANLLKSHH---- 579
           AV GS+ER + ++IE + G  P WL+P QAI+ T+ +S   +++A+ + ++L  H+    
Sbjct: 357 AVLGSVERLMALLIEKYDGKWPFWLNPRQAIILTVNTSTPVLDWAEHVRDVLVGHNKQNV 416

Query: 580 -----LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRR 623
                L+++ D     +  KI+E        I++ GD++   + + + R
Sbjct: 417 FRPTGLAVDVDTTARPLGAKIKEARTNGYGQILVVGDEDVKNKQVALGR 465


>gi|116180492|ref|XP_001220095.1| hypothetical protein CHGG_00874 [Chaetomium globosum CBS 148.51]
 gi|88185171|gb|EAQ92639.1| hypothetical protein CHGG_00874 [Chaetomium globosum CBS 148.51]
          Length = 758

 Score =  256 bits (653), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 140/400 (35%), Positives = 217/400 (54%), Gaps = 48/400 (12%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           GS ++  +  G +IF  LI ++R++ ++  ++E+ TP +  + LW +SGH ++Y  +M+ 
Sbjct: 8   GSPILLPN--GARIFNRLIDFLRQQYVRYGFQEVITPTIYKKALWAKSGHLENYSDDMYT 65

Query: 321 VKCADDTIKDLR------TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
           V     +  ++        + LKPMNCPGH  +F    +SYR+LP+R A+F  ++RNE S
Sbjct: 66  VTSTSPSRAEVTDRGEEAEYGLKPMNCPGHCLIFASQTRSYRDLPIRYADFSPLHRNEIS 125

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
           G+L GL RVR F QDD H+FC   Q+ +E  K  + +   Y   G     + LSTRPE+ 
Sbjct: 126 GALSGLTRVRRFHQDDGHIFCRPSQIRDEIAKTLDFVRLTYGVLGLGPYRLVLSTRPEQY 185

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           +GS+  W  AE+ ++  L  + +  Q  IN     G+GAFYGPK + ILKD+ G++ Q  
Sbjct: 186 IGSEEDWTQAESALREAL--VGSRLQYTINP----GDGAFYGPKIDIILKDSDGKEHQTA 239

Query: 495 TIQVDFNLPSRFNAFYVNSHSE------------------KCHPVMIHRAVFGSIERFIG 536
           TIQ+DF LP RFN  Y     E                     PV+IHRAV GS ER + 
Sbjct: 240 TIQLDFQLPKRFNLEYTAPAPEFEKRGAITTDAELLAEYGPVQPVLIHRAVLGSAERLMA 299

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSS--AVEYAQEIANLL-------------KSHHLS 581
           ++IE++KG  P WL+P QAIV T+ +S     +A++  ++L                 L+
Sbjct: 300 LLIEHYKGKWPFWLNPRQAIVITVNNSEPVANWARQTRDILLGVSASTSTIEAASPTGLA 359

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
           I+ D  N  +  K+RE   K   +II  G ++   +++G+
Sbjct: 360 IDIDDSNRGVELKVREAKTKGYGLIIGVGPRDVETKTVGV 399


>gi|70996464|ref|XP_752987.1| threonyl-tRNA synthetase [Aspergillus fumigatus Af293]
 gi|66850622|gb|EAL90949.1| threonyl-tRNA synthetase [Aspergillus fumigatus Af293]
 gi|159131721|gb|EDP56834.1| threonyl-tRNA synthetase [Aspergillus fumigatus A1163]
          Length = 535

 Score =  255 bits (652), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 153/427 (35%), Positives = 222/427 (51%), Gaps = 48/427 (11%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQH 303
           D+R L    DLF  +    G   +   G  +   LIS++R + ++  + E+ TP +  + 
Sbjct: 70  DYRALGTAQDLFTTSIYSPGSPLFLPNGTHVINRLISFLRTQYLQYGFREVLTPTIYKRS 129

Query: 304 LWQQSGHWDSYRANMFAVKC------ADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           LW+ SGHW +Y+ +M+ VK       AD    +  ++ LKPMNCPGH  +F     SYRE
Sbjct: 130 LWEVSGHWQNYKDDMYEVKGRGATGEADGETGEDESYGLKPMNCPGHCLLFKSQNHSYRE 189

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R A+F  ++RNE SG+L GL RVR F QDD H+FC  +Q+  E       +  +   
Sbjct: 190 LPIRYADFSPLHRNEISGALSGLTRVRRFHQDDGHIFCRPQQIKGEIASALGFVDMVMTT 249

Query: 418 FGFEKIMVKLSTRPEKR-VGSDALWDDAENIMKGVLDTIKNSSQD-RINTGVLLGEGAFY 475
           FG     + LSTRPEK  +GS  LWD AE  ++  LD   NS ++  +N     G+GAFY
Sbjct: 250 FGLGPYRLVLSTRPEKDFIGSLELWDSAEAQLREALD---NSGREWAMNE----GDGAFY 302

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE---------KCHPVMIHRA 526
           GPK +  L+D  G+  Q  TIQ+D NLP RF   Y  +  E         +  PV++HRA
Sbjct: 303 GPKIDIQLQDQAGKYHQLSTIQLDMNLPQRFGLEYQVAEGEEDYNPATPGRATPVLVHRA 362

Query: 527 VFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITS--SAVEYAQEIA------------ 572
            FGS+ERF+ ++IE + G  P WLSP Q I+ T+    + ++ AQE A            
Sbjct: 363 NFGSLERFLALLIEQYAGRWPFWLSPRQGIILTVNQDEAVLQQAQEAAAKISGYRPLVAG 422

Query: 573 --NLLKSHHLS-------IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRR 623
             N      LS       I+ D  ++T+  KI+     K  +I I G K+ ++ SI +  
Sbjct: 423 QDNATSPKPLSSVDSTYLIDVDTSSQTLGKKIQRAKQMKYNLIFILGPKDVADSSITVDV 482

Query: 624 FGSTTTQ 630
            G   T+
Sbjct: 483 TGQMQTK 489


>gi|54400362|ref|NP_001005932.1| threonyl-tRNA synthetase, cytoplasmic isoform 2 [Danio rerio]
 gi|53734186|gb|AAH83525.1| Zgc:92586 [Danio rerio]
          Length = 624

 Score =  255 bits (652), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 140/311 (45%), Positives = 193/311 (62%), Gaps = 17/311 (5%)

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
           FALKPMNCPGH  +F+H  +S+RELP+RLA+FG ++RNE SG+L GL RVR F QDDAH+
Sbjct: 307 FALKPMNCPGHCLMFDHRPRSWRELPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHI 366

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
           FC+ +Q+ +E     + + ++Y  FGF    + LSTRPEK +G   +WD AE        
Sbjct: 367 FCSMDQIESEIKGCLDFLRTVYDVFGF-TFKLNLSTRPEKFLGEPEVWDQAEK------- 418

Query: 454 TIKNSSQDRINTGVL-LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
            ++NS  D     VL  G+GAFYGPK +  +KDAIGR  QC TIQ+DF LP RFN  +V 
Sbjct: 419 QLENSLNDFGEKWVLNPGDGAFYGPKIDIQIKDAIGRYHQCATIQLDFQLPIRFNLTFV- 477

Query: 513 SH--SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQE 570
           SH   +K  PV+IHRA+ GS+ER I I+ EN+ G  PLWLSP Q +V  I  +  EYAQ 
Sbjct: 478 SHDGDDKKRPVIIHRAILGSVERMIAILTENYGGKWPLWLSPRQVMVVPIGPTCDEYAQR 537

Query: 571 IANLLKSHHLSIETDFRNE---TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGST 627
           +    + H + + TD   +   T+N KIR   + +   I++ G+KE S  ++ +R   + 
Sbjct: 538 VQK--EFHKVGLMTDVDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKSSDTVNVRTRDNK 595

Query: 628 TTQKVSLLDAI 638
              + SL D +
Sbjct: 596 VHGERSLTDCM 606



 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/224 (36%), Positives = 117/224 (52%), Gaps = 7/224 (3%)

Query: 5   IKLTFPDGSIKNFPV-HATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEII 62
           IK+T PDG + +      T   VA  IS+ LA   V    N  V DL  P+ E  S+  +
Sbjct: 78  IKITLPDGKVVDGESWKTTPYQVACGISQGLADNTVISKANNGVWDLDRPLEEDCSLVFL 137

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQ 121
             +D  + AV  HS AHIM EA++ ++    +  GP IE+GFYYD +   +  SS++   
Sbjct: 138 KFDDEEAQAVYWHSSAHIMGEAMERVYGGC-LCYGPPIENGFYYDMYLDNEGVSSNDFPC 196

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +E   ++II    PF +  +  E   E+F+  K  +K  IL         T+YR G   D
Sbjct: 197 LENLCKKIIKEKQPFERLEVKKETLLEMFKYNK--FKCRILNEKVTTPTTTVYRCGPLID 254

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAW 225
           LCRGPHVR TG++K   K+ K +  YW G ++   L RIYG ++
Sbjct: 255 LCRGPHVRHTGKIKA-MKIHKNSSTYWEGKADMESLQRIYGISF 297


>gi|213407904|ref|XP_002174723.1| threonyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
 gi|212002770|gb|EEB08430.1| threonyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
          Length = 464

 Score =  254 bits (650), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 141/414 (34%), Positives = 219/414 (52%), Gaps = 33/414 (7%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHR +A    LF I     G I++   G +I  ++ +++R + +   ++E+ TP +    
Sbjct: 39  DHRSIAARQKLFTINHLSPGSIYFLPHGTRIINSITNFLRTQYEVLGFKEVITPLIYKPE 98

Query: 304 LWQQSGHWDSYRANMFAVKCADDT--IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           LW++SGH   Y+ NMF V    ++   KD  +F LKPMNCP H  +F    +SY+ELP+R
Sbjct: 99  LWKRSGHLSKYKENMFFVTSEHNSEDQKDSSSFGLKPMNCPAHCLLFAEEERSYKELPLR 158

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
            A+F +++R E SG+L GL R+R F QDD H+FC ++Q++ E  K    I   Y  F   
Sbjct: 159 FADFSTLHRYEASGALSGLTRLRSFHQDDGHIFCRRDQVYAEIQKDLLFIKKFYALFHMN 218

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            +   LSTRP   +G    WD AE I++ VL      ++  +N    +G+GAFYGPK + 
Sbjct: 219 DLTFHLSTRPTDYIGEADQWDHAERILEKVL------TESGMNWKRKVGDGAFYGPKIDV 272

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE-------KCHPVMIHRAVFGSIERF 534
            ++D  GR  Q  TIQ+DF LP RF   +   H +       +C PV+IHRAV GS+ERF
Sbjct: 273 HVRDTYGRSQQTATIQLDFQLPKRFQLRFRTEHGDNRLLQQYEC-PVLIHRAVLGSLERF 331

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSS--AVEYAQEIANLLKSHHLS----------- 581
           +GI+IE+  G  P W+SP  AI+ T+  +   + YA+E+   L  ++ S           
Sbjct: 332 LGILIEHLNGKWPFWISPRHAIILTLNQNQDVMAYAKEVQKTLSLNNRSFQAGLLPLNTF 391

Query: 582 ---IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
              ++ D     +  ++ E         I+ G KE    ++ +   GS   +++
Sbjct: 392 VFHVDLDCNAAPLGRRLNEARKLDYNYEIVIGTKETENHTLAVSERGSNANRRM 445


>gi|315043510|ref|XP_003171131.1| threonyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
 gi|311344920|gb|EFR04123.1| threonyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
          Length = 523

 Score =  253 bits (646), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 157/433 (36%), Positives = 228/433 (52%), Gaps = 44/433 (10%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHR L    DLF  +    G   +   G  I   LIS++R + +   + E+ TP +  Q 
Sbjct: 60  DHRALGTAQDLFTNSIYSPGSPLFRPNGTHILNKLISFLRAQYRQYGFREVLTPNIYKQS 119

Query: 304 LWQQSGHWDSYRANMFAVKCADDT--IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           LW+ SGHW +Y+ +M+ V    DT    +  T+ LKPMNCPGH  +F     SYRELPVR
Sbjct: 120 LWEVSGHWQNYKDDMYEVGGRGDTGDSTENETYGLKPMNCPGHCLLFKSQKHSYRELPVR 179

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF- 420
            A+F  ++RNE SGSL GL RVR F QDD H+FC   Q+ +E         ++ + FG  
Sbjct: 180 YADFSPLHRNEVSGSLSGLTRVRRFHQDDGHIFCRPGQIGSEIQLALKFADTVLQTFGLA 239

Query: 421 EKIMVKLSTRPEKR-VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           +   + LSTRPEK  +GS   W++AE  ++  LD    S +  +N     G+GAFYGPK 
Sbjct: 240 DGYRLVLSTRPEKDFIGSLEQWENAEQQLRQALDNSGLSWE--LNE----GDGAFYGPKI 293

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFY-VNSHSE--------KCHPVMIHRAVFGS 530
           +  ++D+ G+  Q  TIQ+D NLP RF   Y V   SE        +  PV+IHRA+FGS
Sbjct: 294 DLQIQDSQGKYHQLSTIQLDMNLPQRFGLEYLVPEGSEEYDPATGGRATPVLIHRAIFGS 353

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIA------NLLKSHHLS--- 581
           +ERF  ++IE + G  P WLSP QAI+ T+     + A+++         + S H S   
Sbjct: 354 LERFFALLIERYNGQWPFWLSPHQAILLTVGKGLEQAAEDVVAKVSGFEPITSTHPSSTG 413

Query: 582 -----------IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR---RFGST 627
                      ++ D  + ++  KI +    +  ++ I G K  +E S+ I    + G  
Sbjct: 414 LPLSPLQPTFNVDLDLASRSLPKKIHDAHAARYNLVFIMGPKNLAEGSVDIDLSGQIGGK 473

Query: 628 TTQKV-SLLDAIP 639
           T  ++ +LLD IP
Sbjct: 474 TEDEIKALLDGIP 486


>gi|255024220|ref|ZP_05296206.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL J1-208]
          Length = 279

 Score =  253 bits (645), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 123/278 (44%), Positives = 190/278 (68%), Gaps = 4/278 (1%)

Query: 45  GKVCDLSDPVRE-GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG 103
           G++ DL  P+ E G+IEI+TP+   +L ++RHS AH+MA+A++ ++P+V+  +GP I+ G
Sbjct: 1   GELLDLVTPIHEDGAIEIVTPDHEDALGILRHSTAHLMAQALKRLYPDVKFGVGPAIDTG 60

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE 163
           FYYD D E   S + L +IEK+MQ+I+  + P  ++ +S E+A + F++  + YK+E++E
Sbjct: 61  FYYDIDTEAVISDESLVEIEKEMQKIVRENIPIEREVVSREEAIKRFKAIGDQYKLELIE 120

Query: 164 SIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
           +IP  E VT+Y QGE+FDLCRG HV STG++ + FKL+ VAGAYWRGDSN  ML RIYGT
Sbjct: 121 AIPEDETVTIYTQGEFFDLCRGVHVPSTGKI-QVFKLLSVAGAYWRGDSNNKMLQRIYGT 179

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISY 282
           A+  +  L +++   +E+++RDHRKL +E+DLF +  E G G+  W  KG  I + +  Y
Sbjct: 180 AFFDKNGLKEFIQMQKEAKERDHRKLGKELDLFTNSVEVGQGLPLWLPKGATIRRVIERY 239

Query: 283 M-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMF 319
           +  ++ +  Y  + TP + +  L++ SGHWD Y   MF
Sbjct: 240 IVDKEERLGYNHVYTPIMANVELYKTSGHWDHYDDGMF 277


>gi|240274490|gb|EER38006.1| threonyl-tRNA synthetase [Ajellomyces capsulatus H143]
          Length = 550

 Score =  253 bits (645), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 154/455 (33%), Positives = 228/455 (50%), Gaps = 68/455 (14%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHR +  E +LF  ++   G   +   G  I   L S++R +     + E+ TP +  + 
Sbjct: 90  DHRVVGTEQELFVTSQYSPGSPLFLPNGTHILNKLTSFLRAQYTQYGFLEVLTPSIYKKS 149

Query: 304 LWQQSGHWDSYRANMFAVK--------CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           LW+ SGHW +Y+ +M+ V+         A+  I +  ++ LKPMNCPGH  +F     SY
Sbjct: 150 LWKVSGHWQNYKDDMYEVRGRNATGEQTAETQIGEDESYGLKPMNCPGHCLLFKSQNHSY 209

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP+R A+F  ++RNE SGSL GL RVR F QDD H+FC  +Q+ +E         ++ 
Sbjct: 210 RELPLRYADFSPLHRNEISGSLSGLTRVRRFHQDDGHIFCRPQQIGSEIESALKFTDTVM 269

Query: 416 KDFGFEKIMVKLSTRPEKR-VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           + FGFE   + LSTRPEK  +GS  LWD AE  ++  L+  K+     +N     G+GAF
Sbjct: 270 RTFGFENYRLVLSTRPEKDFIGSVELWDSAERQLRDALE--KSGRSWELNH----GDGAF 323

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE---------KCHPVMIHR 525
           YGPK +  ++D+ G+  Q  TIQ+D NLP RF   Y     E         K  PV+IHR
Sbjct: 324 YGPKIDMQIQDSDGKFHQLSTIQLDMNLPQRFELEYAVPEGEEDYNPETPGKAVPVLIHR 383

Query: 526 AVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT------------------------ 561
           A+FGS+ERF  ++IEN+ G  P WLSP Q I+ T++                        
Sbjct: 384 AIFGSLERFFALLIENYNGRWPFWLSPRQGIILTVSQDEKLLQAADDAAAKMSGYRRVLS 443

Query: 562 -----SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASE 616
                +S     + ++    +  + ++T  R  ++  KIRE    K  +I + G+K   +
Sbjct: 444 SSGDANSTTGPPKPLSPARTTFRIDLDTSAR--SLGKKIREAKKMKYNLIFVLGEKNLVD 501

Query: 617 RSIGIRRFG------------STTTQKVSLLDAIP 639
            S+ +   G            S  T  + LLDA P
Sbjct: 502 GSVDVDLGGQMMMALGKGGVNSGATSHLHLLDATP 536


>gi|38639683|ref|NP_943452.1| theronyl-tRNA synthetase [Klebsiella pneumoniae]
 gi|38016781|gb|AAR07802.1| theronyl-tRNA synthetase [Klebsiella pneumoniae]
 gi|238549656|dbj|BAH66007.1| theronyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
          Length = 345

 Score =  253 bits (645), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 122/271 (45%), Positives = 168/271 (61%), Gaps = 6/271 (2%)

Query: 379 GLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD 438
           G + +     ++A   CT EQ+  EC  I +L++ IYK FGFE++ +KLSTRPEKR+GSD
Sbjct: 77  GTLNIITLFDEEALDPCTLEQLEGECKSILHLVLDIYKQFGFEEVEIKLSTRPEKRMGSD 136

Query: 439 ALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
             WD  EN +   L+      Q  +N G    EGAFYGPK E++L+DAIGRDWQCGT+QV
Sbjct: 137 TDWDRLENALSASLEA--QGLQWSVNPG----EGAFYGPKLEFVLRDAIGRDWQCGTLQV 190

Query: 499 DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVT 558
           D NLP RF+  Y+        PVM+HRA+FGS+ERF GI++E++ G LP WLSP+QA+V 
Sbjct: 191 DMNLPDRFDIGYIAEDGSTKRPVMLHRALFGSLERFTGILLEHYAGKLPAWLSPVQAVVM 250

Query: 559 TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERS 618
           TIT     YA+++   L+   L  ETD RNE I YKIRE ++ +IP ++I GD E +   
Sbjct: 251 TITDKQHRYAEQVLKALRRKGLRCETDLRNEKIGYKIREQTLARIPFLLIIGDAEENAAR 310

Query: 619 IGIRRFGSTTTQKVSLLDAIPILTKESLPPD 649
           + +R         + L +A   +     PP+
Sbjct: 311 VTVRDRTGKCMGTLLLNEAADCIEMCCRPPE 341



 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 6/83 (7%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +  T PDGS+K      T  +VAESI  S+AK AV   I+G+  DL + V + G++ IIT
Sbjct: 24  LTFTLPDGSLKLVRKGTTLQNVAESIDSSVAKNAVYAEIDGQYIDLIEAVQKSGTLNIIT 83

Query: 64  -----PEDPRSLAVIRHSCAHIM 81
                  DP +L  +   C  I+
Sbjct: 84  LFDEEALDPCTLEQLEGECKSIL 106


>gi|212531825|ref|XP_002146069.1| threonyl-tRNA synthetase [Penicillium marneffei ATCC 18224]
 gi|210071433|gb|EEA25522.1| threonyl-tRNA synthetase [Penicillium marneffei ATCC 18224]
          Length = 541

 Score =  253 bits (645), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 157/486 (32%), Positives = 240/486 (49%), Gaps = 52/486 (10%)

Query: 182 LCRGPHVRST---GQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
            CR  H+R+     + +   ++  VA   +     RP+  R   ++ +  Q         
Sbjct: 7   FCRRQHLRTNISWSRNRIVPEVASVAAVRYCSCHARPLTPRRQDSSASRPQSTDATSNAQ 66

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
             +   DHR L    +LF  +    G   +   G  I   LI ++R + +   + E+ TP
Sbjct: 67  PSTPAADHRILGTAQELFTSSPYSPGSPLFLPNGTHIINKLIGFLRAQYRQYGFREVLTP 126

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDT------IKDLRTFALKPMNCPGHVAVFNHG 351
            +  + LW+ SGHW +Y+ +M+ V+    T      + +   + LKPMNCPGH  +F   
Sbjct: 127 NIYKKSLWEISGHWQNYKDDMYEVRGRGATGETEGELGEDEQYGLKPMNCPGHCLLFKSQ 186

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI 411
             SYR+LPVR A+F  ++RNE SGSL GL RVR F QDD H+FC  +Q+  E       +
Sbjct: 187 NHSYRDLPVRYADFSPLHRNEISGSLSGLTRVRRFHQDDGHIFCRPQQIGKEIDLALTFV 246

Query: 412 ISIYKDFGFEKIMVKLSTRPEKR-VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
             + K FG  K  + LSTRPEK  +GS  LWD AE  ++  LD  K+     +N     G
Sbjct: 247 NMVMKTFGLPKYNLVLSTRPEKDFIGSLELWDSAEEQLRQALD--KSGLPWELNE----G 300

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE---------KCHPV 521
           +GAFYGPK +  L+D+ G+  Q  TIQ+D NLP RF   Y  +  E         K  PV
Sbjct: 301 DGAFYGPKIDIQLQDSDGKYHQLSTIQLDLNLPQRFELEYQVAEGEPDYDPNTPGKATPV 360

Query: 522 MIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITS----------SAVEYA--- 568
           +IHRA+FGS+ERF+ ++IE + G  P WLSP Q I+ T+ S          +A +++   
Sbjct: 361 LIHRAIFGSLERFLALLIERYAGRWPFWLSPRQGIILTVQSDEPVLRLAEEAAAKFSGYD 420

Query: 569 -------------QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEAS 615
                        Q+ A L       I+ D  + +++ KI+     K  +I + G K  +
Sbjct: 421 TIIPRLHSEDAELQQPAPLTSEPTFLIDIDSSSRSLSKKIQRAKSMKYNLIFVVGSKNLA 480

Query: 616 ERSIGI 621
           ++++ +
Sbjct: 481 DKTMDV 486


>gi|121700783|ref|XP_001268656.1| threonyl-tRNA synthetase [Aspergillus clavatus NRRL 1]
 gi|119396799|gb|EAW07230.1| threonyl-tRNA synthetase [Aspergillus clavatus NRRL 1]
          Length = 532

 Score =  252 bits (644), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 150/427 (35%), Positives = 218/427 (51%), Gaps = 48/427 (11%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQH 303
           D+R L    DLF  +    G   +   G  +   LIS++R + ++  + E+ TP +  + 
Sbjct: 67  DYRALGTAQDLFTTSVYSPGSPLFLPNGTHVINRLISFLRTQYLQYGFREVLTPTIYKRS 126

Query: 304 LWQQSGHWDSYRANMFAVKC------ADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           LW+ SGHW +Y+ +M+ V+       AD    +  ++ LKPMNCPGH  +F     SYRE
Sbjct: 127 LWEVSGHWQNYKDDMYEVRGRGATGEADGEAGEDESYGLKPMNCPGHCLLFKSQNHSYRE 186

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R A+F  ++RNE SGSL GL RVR F QDD H+FC  +Q+  E       +  +   
Sbjct: 187 LPIRYADFSPLHRNEVSGSLSGLTRVRRFHQDDGHIFCRPQQIKGEIASALGFVDMVMTT 246

Query: 418 FGFEKIMVKLSTRPEKR-VGSDALWDDAENIMKGVLDTIKNSSQD-RINTGVLLGEGAFY 475
           FG     + LSTRPEK  +GS  LWD AE  ++  LD   NS ++  +N     G+GAFY
Sbjct: 247 FGLGPYRLVLSTRPEKDFIGSLELWDSAEAQLREALD---NSGREWAMNE----GDGAFY 299

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE---------KCHPVMIHRA 526
           GPK +  L+D  G+  Q  TIQ+D NLP RF   Y  +  E         +  PV++HRA
Sbjct: 300 GPKIDIQLQDQAGKYHQLSTIQLDMNLPQRFGLEYQVAEGEEDYDPATPGRATPVLVHRA 359

Query: 527 VFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITS--SAVEYAQEIANLLKSHH----- 579
            FGS+ERF+ ++IE + G  P WLSP Q I+ T+    + +  A E A  L         
Sbjct: 360 NFGSLERFLALLIEQYGGRWPFWLSPRQGIILTVNQDEAVLTQAHEAAAQLSGFRPLVAG 419

Query: 580 ----------------LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRR 623
                             I+ D  ++T+  KI+     K  +I I G K+ ++ SI +  
Sbjct: 420 QNDAKTPRPLSSVDSTFLIDVDTSSQTLGKKIQRAKQMKYNLIFILGPKDVADSSITVDV 479

Query: 624 FGSTTTQ 630
            G   T+
Sbjct: 480 TGQLQTK 486


>gi|168998640|ref|YP_001687908.1| hypothetical protein pK2044_00390 [Klebsiella pneumoniae
           NTUH-K2044]
          Length = 333

 Score =  252 bits (644), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 122/271 (45%), Positives = 168/271 (61%), Gaps = 6/271 (2%)

Query: 379 GLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD 438
           G + +     ++A   CT EQ+  EC  I +L++ IYK FGFE++ +KLSTRPEKR+GSD
Sbjct: 65  GTLNIITLFDEEALDPCTLEQLEGECKSILHLVLDIYKQFGFEEVEIKLSTRPEKRMGSD 124

Query: 439 ALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
             WD  EN +   L+      Q  +N G    EGAFYGPK E++L+DAIGRDWQCGT+QV
Sbjct: 125 TDWDRLENALSASLEA--QGLQWSVNPG----EGAFYGPKLEFVLRDAIGRDWQCGTLQV 178

Query: 499 DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVT 558
           D NLP RF+  Y+        PVM+HRA+FGS+ERF GI++E++ G LP WLSP+QA+V 
Sbjct: 179 DMNLPDRFDIGYIAEDGSTKRPVMLHRALFGSLERFTGILLEHYAGKLPAWLSPVQAVVM 238

Query: 559 TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERS 618
           TIT     YA+++   L+   L  ETD RNE I YKIRE ++ +IP ++I GD E +   
Sbjct: 239 TITDKQHRYAEQVLKALRRKGLRCETDLRNEKIGYKIREQTLARIPFLLIIGDAEENAAR 298

Query: 619 IGIRRFGSTTTQKVSLLDAIPILTKESLPPD 649
           + +R         + L +A   +     PP+
Sbjct: 299 VTVRDRTGKCMGTLLLNEAADCIEMCCRPPE 329



 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 6/83 (7%)

Query: 5  IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
          +  T PDGS+K      T  +VAESI  S+AK AV   I+G+  DL + V + G++ IIT
Sbjct: 12 LTFTLPDGSLKLVRKGTTLQNVAESIDSSVAKNAVYAEIDGQYIDLIEAVQKSGTLNIIT 71

Query: 64 -----PEDPRSLAVIRHSCAHIM 81
                 DP +L  +   C  I+
Sbjct: 72 LFDEEALDPCTLEQLEGECKSIL 94


>gi|325090828|gb|EGC44138.1| threonyl-tRNA synthetase [Ajellomyces capsulatus H88]
          Length = 578

 Score =  251 bits (642), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 155/463 (33%), Positives = 230/463 (49%), Gaps = 68/463 (14%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQH 303
           DHR +  E +LF  ++   G   +   G  I   L S++R +  K  + E+ TP +  + 
Sbjct: 90  DHRVVGTEQELFVTSQYSPGSPLFLPNGTHILNKLTSFLRAQYTKYGFLEVLTPSIYKKS 149

Query: 304 LWQQSGHWDSYRANMFAVK--------CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           LW+ SGHW +Y+ +M+ V+         A+  I +  ++ LKPMNCPGH  +F     SY
Sbjct: 150 LWKVSGHWQNYKDDMYEVRGRNATGEQTAETQIGEDESYGLKPMNCPGHCLLFKSQNHSY 209

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP+R A+F  ++RNE SGSL GL RVR F QDD H+FC  +Q+ +E         ++ 
Sbjct: 210 RELPLRYADFSPLHRNEISGSLSGLTRVRRFHQDDGHIFCRPQQIGSEIESALKFTDTVM 269

Query: 416 KDFGFEKIMVKLSTRPEKR-VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           + FGFE   + LSTRPEK  +GS  LWD AE  ++  L+  K+     +N     G+GAF
Sbjct: 270 RTFGFENYRLVLSTRPEKDFIGSVELWDSAERQLRDALE--KSGRSWELNH----GDGAF 323

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE---------KCHPVMIHR 525
           YGPK +  ++D+ G+  Q  TIQ+D NLP RF   Y     E         K  PV+IHR
Sbjct: 324 YGPKIDMQIQDSDGKFHQLSTIQLDMNLPQRFELEYTVPEGEEDYNPETPGKAVPVLIHR 383

Query: 526 AVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT------------------------ 561
           A+FGS+ERF  ++IEN+ G  P WLSP Q I+ T++                        
Sbjct: 384 AIFGSLERFFALLIENYNGRWPFWLSPRQGIILTVSQDEKLLQAADDAAAKMSGYRRVLS 443

Query: 562 -----SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASE 616
                +S     + ++    +  + ++T  R  ++  KIRE    K  +I + G+K   +
Sbjct: 444 SSGDANSTTGPPKPLSPARTTFRIDLDTSAR--SLGKKIREAKKMKYNLIFVLGEKNLVD 501

Query: 617 RSIGIRRFG------------STTTQKVSLLDAIPILTKESLP 647
            S+ +   G            S  T  + LLD  P      +P
Sbjct: 502 GSVDVDLGGQMMMALEKGGVNSGATSHLHLLDDTPCWDFTGVP 544


>gi|290559258|gb|EFD92597.1| Anticodon-binding domain protein [Candidatus Parvarchaeum
           acidophilus ARMAN-5]
          Length = 329

 Score =  251 bits (642), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 123/304 (40%), Positives = 192/304 (63%), Gaps = 10/304 (3%)

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
           +ALKPMNCP    +F    +SYRELP+RL+++G ++R E  G+L GL R R   Q+D+HV
Sbjct: 13  YALKPMNCPFSAILFKSKTRSYRELPMRLSDYGFLHRYELEGTLDGLFRTRLMEQNDSHV 72

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
           +  ++Q+ +E +++ +++   Y  F  + I +KL+TRPEKR+G + LWD AE I+K  LD
Sbjct: 73  YVMEDQIESEMMRMFDIMDDTYNPFDLKPI-IKLATRPEKRIGDEELWDKAEKILKETLD 131

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRD---WQCGTIQVDFNLPSRFNAFY 510
                 +   N  +  G+GAFYGPK +    D  G+    +   TIQ+DFNL  RF+A Y
Sbjct: 132 ------KRGYNYEIKEGDGAFYGPKIDIYALDFSGKPEDAYAVSTIQLDFNLAVRFDAKY 185

Query: 511 VNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQE 570
           + S +++  P++IHR++ GSI RF+GI++EN KG+LP W+SP+Q  V TIT    +YA+ 
Sbjct: 186 IGSDNKEHFPIVIHRSIMGSIGRFMGIILENSKGDLPFWISPVQVRVLTITEKNAKYAEN 245

Query: 571 IANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
           +   LK + + ++++  + T+ YKIR+  ++KIP III G KE  + +I +R     T  
Sbjct: 246 VIKKLKENGIRVDSELDSGTLEYKIRKGQLEKIPYIIIIGSKEEEKNTISVRNRKGKTDY 305

Query: 631 KVSL 634
            + L
Sbjct: 306 NIDL 309


>gi|145230415|ref|XP_001389516.1| threonyl-tRNA synthetase [Aspergillus niger CBS 513.88]
 gi|134055633|emb|CAK37279.1| unnamed protein product [Aspergillus niger]
          Length = 526

 Score =  251 bits (642), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 151/427 (35%), Positives = 215/427 (50%), Gaps = 54/427 (12%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTP 297
           + S   D+R L    DLF  +    G   +   G  I   LI+++R + ++  + E+ TP
Sbjct: 55  QSSTPADYRALGTSQDLFTTSVYSPGSPLFLPNGTHIINKLITFLRTQYLQYGFREVLTP 114

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKC------ADDTIKDLRTFALKPMNCPGHVAVFNHG 351
            +  + LW+ SGHW +Y+ +M+ V+        D    +  ++ LKPMNCPGH  +F   
Sbjct: 115 TIYKRSLWEVSGHWQNYKDDMYEVRGRGATGDTDGEAGEDESYGLKPMNCPGHCLLFKSQ 174

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI 411
             SYRELP+R A+F  ++RNE SGSL GL RVR F QDD H+FC  +Q+  E       +
Sbjct: 175 THSYRELPIRYADFSPLHRNEVSGSLSGLTRVRRFHQDDGHIFCRPQQIKGEIASALGFV 234

Query: 412 ISIYKDFGFEKIMVKLSTRPEKR-VGSDALWDDAENIMKGVLDTIKNSSQDRINTG---- 466
             +   FG     + LSTRPEK  +GS  LW+ AE  ++  LD          NTG    
Sbjct: 235 DLVMTTFGLGPYRLVLSTRPEKDFIGSLELWNSAEAQLREALD----------NTGREWA 284

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE---------K 517
           +  G+GAFYGPK +  L+D  G+  Q  TIQ+D NLP RF   Y  +  E         K
Sbjct: 285 MNEGDGAFYGPKIDIQLQDKAGKYHQLSTIQLDMNLPQRFGLEYQVAEGEEDYNPETPGK 344

Query: 518 CHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITS--SAVEYAQEIA--- 572
             PVMIHRA FGS+ERF+ ++IE + G  P WLSP Q IV T+    + V+ A E A   
Sbjct: 345 ATPVMIHRANFGSLERFLALLIEEYAGRWPFWLSPRQGIVLTVNQDEAVVQQAHEAAAKI 404

Query: 573 ---NLLKSHHLS---------------IETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
                L+   +                I+ D   +++N KI+     K  +I I G K+ 
Sbjct: 405 SGFRALQPGQMGTDAPQPISSVDSTFLIDVDSSGQSLNKKIQRAKHMKYNLIFILGPKDV 464

Query: 615 SERSIGI 621
           +   I +
Sbjct: 465 AASRITV 471


>gi|224084293|ref|XP_002191292.1| PREDICTED: hypothetical protein [Taeniopygia guttata]
          Length = 447

 Score =  251 bits (641), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 138/415 (33%), Positives = 216/415 (52%), Gaps = 49/415 (11%)

Query: 210 GDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWH 269
           G +    L R+   A+ + QEL Q+    +E+ +RDHR++ ++ +LF   +   G  F+ 
Sbjct: 46  GGAGGQSLQRVAAVAFPSAQELEQWQRAQDEAAQRDHRRIGKDQELFFFHKFSPGSCFFL 105

Query: 270 RKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTI 328
            +G  ++ TL+ ++R + +   + E+ TP +    LW+ SGHW  Y  ++F+V  A + +
Sbjct: 106 PRGAHVYNTLVEFIRSEYRARGFSEVVTPNLFSPRLWELSGHWQHYSPHIFSVPAAPEPL 165

Query: 329 KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQ 388
                 +LKPMNCP H  +F H  +S+RELP+RLA+FG ++RNEP G+L GL RVR F Q
Sbjct: 166 ------SLKPMNCPAHCLMFAHRPRSWRELPLRLADFGVLHRNEPPGTLTGLTRVRRFQQ 219

Query: 389 DDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIM 448
           DDAH+FCT EQ+ +E     + I ++Y   GF    + L+TRP+  +G    WD AE  +
Sbjct: 220 DDAHIFCTLEQVSSEIDSSLDFIRTVYAVLGF-SFRLALATRPDGFLGDPETWDRAEQQL 278

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
           +  L       +      +  G+GAFYGPK +  ++DA+GR  QCGTIQ+DF +P RF  
Sbjct: 279 ERSLQNFGQPWE------LSPGDGAFYGPKIDIRIRDALGRHHQCGTIQLDFQMPERFEL 332

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYA 568
            Y                                    PLWLSP+QA+V   T    +YA
Sbjct: 333 EYAR----------------------------------PLWLSPLQAMVIPQTPEVEDYA 358

Query: 569 QEIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           +E+  +L+   L  + D     T+  KIR   +      ++ G +E    ++ +R
Sbjct: 359 REVQAVLRRGGLLADLDGDPGTTLARKIRRAQLTHYNFQLVVGRREREHGTVSVR 413


>gi|332967848|gb|EGK06946.1| threonine--tRNA ligase [Desmospora sp. 8437]
          Length = 246

 Score =  251 bits (641), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 120/245 (48%), Positives = 169/245 (68%), Gaps = 3/245 (1%)

Query: 5   IKLTFPDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEII 62
           + +  PDGS++ F     T  +VAESISR LAKKA+A  ++GK  DLS  V +G+ + I+
Sbjct: 3   VSIQLPDGSVRQFEGKRVTVREVAESISRGLAKKAIAGQVDGKTVDLSREVSDGAEVRIL 62

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T EDP  L V RHS  H+MA+AV+ ++  V++ IGP+IEDGFYYD D  QP ++D+L +I
Sbjct: 63  TLEDPEGLEVYRHSATHLMAQAVKRLFSGVKLGIGPVIEDGFYYDMDLPQPLTADDLPKI 122

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M+ I   D P  ++ ++ E+A  ++E   +  K+E++  +P  E +TLY QGE+FDL
Sbjct: 123 EDEMRRIAKEDLPIARRVVTREEALRIYEEAGDELKLELIRELPEDEEITLYEQGEFFDL 182

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG++K  FKL+ VAGAYWRGDS   ML R+YG+ W  Q +L  YL  LEE++
Sbjct: 183 CRGPHVPSTGKLKN-FKLLSVAGAYWRGDSENQMLQRVYGSIWPKQAQLEAYLKQLEEAK 241

Query: 243 KRDHR 247
           +RDHR
Sbjct: 242 ERDHR 246


>gi|13508292|ref|NP_110242.1| threonyl-tRNA synthetase [Mycoplasma pneumoniae M129]
 gi|2501059|sp|P75225|SYT_MYCPN RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|1673960|gb|AAB95937.1| threonyl-tRNA synthetase [Mycoplasma pneumoniae M129]
 gi|301633413|gb|ADK86967.1| threonine--tRNA ligase [Mycoplasma pneumoniae FH]
          Length = 564

 Score =  251 bits (640), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 162/566 (28%), Positives = 281/566 (49%), Gaps = 34/566 (6%)

Query: 80  IMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQ 139
           ++   +++ +P+VQ     + E  FY DF  E+ FS  E  Q+E+ +     + +  ++ 
Sbjct: 7   LLQSWLKANYPQVQFGSYGVQEGEFYLDFKVEKSFSIKEFEQLEQDLNAYFNQLNNVVQT 66

Query: 140 YLSHEKARELFESKKEAYKVEILESIPAKENV--TLYRQGEWFDLCRGPHVRSTGQVKKF 197
            +   K+ + F++  + +   ++ESI +   V  T+  Q  W      P  +     + F
Sbjct: 67  KIDKTKSLKFFQA--DPFTTTLIESIESNSLVVTTVNEQTFWVHDLVLPLPK-----QGF 119

Query: 198 FKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFH 257
            KL+ V+  Y+ GD  +P L R+ G    ++++L   +   E+  + DHR + + +++F 
Sbjct: 120 VKLLNVSANYFLGDPTKPQLQRLVGIFAASKEQLKSLIAANEQKYQNDHRAIGKRLEIFT 179

Query: 258 IAE-DGSGVIFWHRKGW---KIFQTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDS 313
                G+G   W  KG    KI    + Y  +++   ++ +++P + +  L++ SGH+  
Sbjct: 180 FDPLVGAGFPIWLEKGAVLKKIIGDFVHY--QQLMFGFKTVSSPVLANLELYKISGHYVH 237

Query: 314 YRANMF-AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE 372
           Y  +MF +VK  +  +       L+PM CP H  +F H  +SY+ELP R  E   ++R E
Sbjct: 238 YSEDMFPSVKLENQMM------MLRPMTCPHHCLIFKHKRRSYKELPQRFCEDSILHRFE 291

Query: 373 PSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLS---- 428
            SG L GL RVR  T  D H+FC  +Q+  E      LI ++   FGF    + L+    
Sbjct: 292 ASGGLTGLERVRCMTLLDNHIFCRTDQIKAEIKNAFKLIQTVNNKFGFSFDRIDLALHDP 351

Query: 429 TRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIG 488
               K + +D LW ++E+ ++ V   +       +   + +G  AFYGPK ++  K A+ 
Sbjct: 352 NNKAKFIDNDQLWANSESQIESVFKEL------NVPYKIDVGAAAFYGPKIDFQFKTALN 405

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPL 548
           +     TIQ+DF LP RF   Y +  S    PV+IH  + G+ ERFI  ++E   GNLPL
Sbjct: 406 KMITIATIQLDFLLPERFELRYFDEQSNAQTPVIIHVGIVGTYERFIAALLEKTHGNLPL 465

Query: 549 WLSPIQAIVTTITSSAVE-YAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIII 607
           W++P+Q +V  +     E  A+++   L   ++ +  D   + +  K+R   + KIP+ I
Sbjct: 466 WMAPVQVVVIPVNIDKHEKAAKKLYQKLLKENIRVSLDESEDRLGKKVRTAIVNKIPLQI 525

Query: 608 ICGDKEASERS-IGIRRFGSTTTQKV 632
           I GDKE  + + I  R F     QK+
Sbjct: 526 IVGDKEMQDLTRITCRGFKGEKVQKL 551


>gi|46107732|ref|XP_380925.1| hypothetical protein FG00749.1 [Gibberella zeae PH-1]
          Length = 499

 Score =  251 bits (640), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 143/395 (36%), Positives = 215/395 (54%), Gaps = 50/395 (12%)

Query: 225 WNTQQELTQYLYFLEESEKR---DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLIS 281
           W  Q+ L+   ++ +++EKR   DHRKL  + +LF  +    G   +   G +IF  L+ 
Sbjct: 19  WACQKCLSHSRFYSQKTEKREPPDHRKLGLQQELFISSIYSPGSPIFLPNGARIFNRLVD 78

Query: 282 YMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK-----------CADDTIK 329
           ++R++ ++  +EE+ TP +  + LW +SGH ++Y  +M+AV+           C     +
Sbjct: 79  FLRKQYVRYGFEEVITPTIYKKSLWAKSGHLENYADDMYAVRGNTEPPPQHDGCCGSHQE 138

Query: 330 DLRT-------FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMR 382
            L+        + LKPMNCPGH  +F     SYR+LPVR A+F  ++RNE SG+L GL R
Sbjct: 139 YLKPEEEEEGDYGLKPMNCPGHCLIFASKRHSYRDLPVRYADFSPLHRNEISGALSGLTR 198

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF-EKIMVKLSTRPEKR-VGSDAL 440
           VR F QDD H+FC   Q+  E  K  + +  +Y    F     + LSTRP+   +G++A 
Sbjct: 199 VRRFHQDDGHIFCRPSQVEEEIKKTLDFVKVVYTVLRFGASYRLALSTRPKDHYIGTEAE 258

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDF 500
           WD AE+ +K  LD         +  GV  G+GAFYGPK + +L D+ G+D Q  TIQ+DF
Sbjct: 259 WDQAESALKRALDA------SGMEWGVKEGDGAFYGPKIDIVLTDSDGKDHQTATIQLDF 312

Query: 501 NLPSRFNAFYVNSHSE------------------KCHPVMIHRAVFGSIERFIGIMIENF 542
            LP RF   Y     E                     PVMIHRAV GS+ER + ++IE +
Sbjct: 313 QLPKRFELEYQAPAPEYEARGETTEDPALLAEYGPVRPVMIHRAVLGSVERLMALLIEKY 372

Query: 543 KGNLPLWLSPIQAIVTTITSSA--VEYAQEIANLL 575
            G  P WL+P QAIV T+ +S   +++A+ + ++L
Sbjct: 373 DGKWPFWLNPRQAIVLTVNTSTTVLDWAEHVRDVL 407


>gi|255957075|ref|XP_002569290.1| Pc21g23230 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211591001|emb|CAP97220.1| Pc21g23230 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 515

 Score =  250 bits (639), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 151/445 (33%), Positives = 223/445 (50%), Gaps = 45/445 (10%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQH 303
           DHR L    +LF  +    G   +   G  +   LIS++R + ++  + E+ TP +  + 
Sbjct: 51  DHRALGTAQELFTSSVYSPGSPLFLPNGTHVVNKLISFLRTQYLQYGFREVLTPTIYKKS 110

Query: 304 LWQQSGHWDSYRANMFAVKC------ADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           LW+ SGHW +Y+ +M+ V        AD  + +  ++ LKPMNCPGH  +F     SYR+
Sbjct: 111 LWEISGHWQNYKDDMYEVTGRGASGEADGEVGEDESYGLKPMNCPGHCLLFKSQNHSYRD 170

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           +PVR A+F  ++RNE SGSL GL RVR F QDD H+FC ++Q+ +E       +    K 
Sbjct: 171 MPVRYADFSPLHRNEVSGSLTGLTRVRRFHQDDGHIFCRRQQIKSEIASALGFVDMAMKT 230

Query: 418 FGFEKIMVKLSTRPEKR-VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           FG     + LSTRPE   +G+  +WD+AE  ++  LD+     +  +N     G+GAFYG
Sbjct: 231 FGLGPYRLVLSTRPETDYIGTLEMWDNAEMQLREALDS--TGREWALNE----GDGAFYG 284

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK---------CHPVMIHRAV 527
           PK +  L+D  G+  Q  TIQ+D NLP RF   Y  + SE            PVMIHRA+
Sbjct: 285 PKIDIQLQDQAGKYHQLSTIQLDMNLPQRFGLEYQVAESEPDYNPATPGVATPVMIHRAI 344

Query: 528 FGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITS--SAVEYAQEIANLLKSHH------ 579
           FGS+ERF+ ++IE   G+ P WLSP QAIV T+    + V  AQE A             
Sbjct: 345 FGSLERFLALLIEQHGGHWPFWLSPRQAIVLTVNQDDAVVRQAQEAAAKFAGFRALLNDG 404

Query: 580 --------------LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
                           ++ D   +T+  KI+     K  +I I G ++ ++  I +   G
Sbjct: 405 TAEPPRPLSSVDSTFLVDVDTSAQTLGKKIQRAKQMKYNLIFILGSRDLADGGITVDVTG 464

Query: 626 STTTQKVSLLDAIPILTKESLPPDC 650
              ++       +  L K  L  D 
Sbjct: 465 QMQSKTDKDAQTLQALIKARLGSDA 489


>gi|225561384|gb|EEH09664.1| threonyl-tRNA synthetase [Ajellomyces capsulatus G186AR]
          Length = 577

 Score =  250 bits (639), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 154/463 (33%), Positives = 229/463 (49%), Gaps = 68/463 (14%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHR +  E +LF  ++   G   +   G  I   L S++R +     + E+ TP +  + 
Sbjct: 89  DHRVVGTEQELFVTSQYSPGSPLFLPNGTHILNKLTSFLRAQYTQYGFLEVLTPSIYKKS 148

Query: 304 LWQQSGHWDSYRANMFAVK--------CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           LW+ SGHW +Y+ +M+ V+         A+  I +  ++ LKPMNCPGH  +F     SY
Sbjct: 149 LWKVSGHWQNYKDDMYEVRGRNATGEQTAETQIGEDESYGLKPMNCPGHCLLFKSQNHSY 208

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP+R A+F  ++RNE SGSL GL RVR F QDD H+FC  +Q+ +E         ++ 
Sbjct: 209 RELPLRYADFSPLHRNEISGSLSGLTRVRRFHQDDGHIFCRPQQIGSEIESALKFTDTVM 268

Query: 416 KDFGFEKIMVKLSTRPEKR-VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           + FGFE   + LSTRPEK  +GS  LWD AE  ++  L+  K+     +N     G+GAF
Sbjct: 269 RTFGFENYRLVLSTRPEKDFIGSVELWDSAERQLRDALE--KSGRSWELNH----GDGAF 322

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE---------KCHPVMIHR 525
           YGPK +  ++D+ G+  Q  TIQ+D NLP RF   Y     E         K  PV+IHR
Sbjct: 323 YGPKIDMQIQDSDGKFHQLSTIQLDMNLPQRFELEYAVPEGEEDYNPETPGKAVPVLIHR 382

Query: 526 AVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT------------------------ 561
           A+FGS+ERF  ++IEN+ G  P WLSP Q I+ T++                        
Sbjct: 383 AIFGSLERFFALLIENYNGRWPFWLSPRQGIILTVSQDEKLLQAADDAAAKMSGYQRVLS 442

Query: 562 -----SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASE 616
                +S     + ++    +  + ++T  R  ++  KIRE    K  +I + G+K   +
Sbjct: 443 SSGDANSTTGPPKPLSPARTTFRIDLDTSAR--SLGKKIREAKKMKYNLIFVLGEKNLVD 500

Query: 617 RSIGIRRFG------------STTTQKVSLLDAIPILTKESLP 647
            S+ +   G            S  T  + LLD  P      +P
Sbjct: 501 GSVDVDLGGQMMMTLGKGGVNSGATSHLHLLDDTPCWDFTGVP 543


>gi|67517326|ref|XP_658540.1| hypothetical protein AN0936.2 [Aspergillus nidulans FGSC A4]
 gi|40746809|gb|EAA65965.1| hypothetical protein AN0936.2 [Aspergillus nidulans FGSC A4]
 gi|259488776|tpe|CBF88493.1| TPA: threonyl-tRNA synthetase (AFU_orthologue; AFUA_1G16210)
           [Aspergillus nidulans FGSC A4]
          Length = 523

 Score =  250 bits (638), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 151/416 (36%), Positives = 214/416 (51%), Gaps = 45/416 (10%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQH 303
           D+R L    DLF  +    G   +   G  I   LIS++R + ++  + E+ TP +  Q 
Sbjct: 59  DYRALGTAQDLFTTSIYSPGSPLFLPNGTHIINKLISFLRTQYLQYGFREVLTPTIYKQS 118

Query: 304 LWQQSGHWDSYRANMFAVK---CADDT---IKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           LW+ SGHW +Y+ +M+ V+      DT     +  ++ LKPMNCPGH  +F     SYRE
Sbjct: 119 LWEVSGHWQNYKDDMYEVRGRGAMGDTEGEAGENESYGLKPMNCPGHCLLFKSQNHSYRE 178

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R A+F  ++RNE SGSL GL RVR F QDD H+FC  +Q+  E       +  +   
Sbjct: 179 LPIRYADFSPLHRNEISGSLSGLTRVRRFHQDDGHIFCRPQQIKGEIKSALGFVDLVMTT 238

Query: 418 FGFEKIMVKLSTRPEKR-VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           FG     + LSTRPEK  +G   LWD AE  ++  LD      Q   N  +  G+GAFYG
Sbjct: 239 FGLGPYRLVLSTRPEKDFIGDLQLWDSAEAQLREALD------QTGKNWAINEGDGAFYG 292

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE---------KCHPVMIHRAV 527
           PK +  L+D  G+  Q  TIQ+D NLP RF   Y  +  E         +  PV+IHRA 
Sbjct: 293 PKIDIQLQDQAGKYHQLSTIQLDMNLPRRFELEYQVAEGEEDYNPATPGRATPVLIHRAN 352

Query: 528 FGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITS--SAVEYAQEIANLLKS-------- 577
           FGS+ERF+ ++IE + G  P WLSP Q I+ T+    + V+ A E A  +          
Sbjct: 353 FGSLERFLALLIEQYSGRWPFWLSPRQGIILTVNQDDAVVKQAHEAAAQISGFKALDQNA 412

Query: 578 -----HHLS-------IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
                  LS       I+ D  ++T++ KI+     K  +I I G K+ +E  I +
Sbjct: 413 ADGIPQPLSATDSTFLIDVDTSSQTLSKKIQRAKQMKYNLIFILGPKDLAEGRISV 468


>gi|261191482|ref|XP_002622149.1| threonyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
 gi|239589915|gb|EEQ72558.1| threonyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
          Length = 569

 Score =  249 bits (635), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 156/455 (34%), Positives = 230/455 (50%), Gaps = 69/455 (15%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQH 303
           DHR +    +LF  +    G   +   G  I   L S++R + I+  + E+ TP +  + 
Sbjct: 82  DHRVVGTAQELFTTSPYSPGSPLFLPNGTHILNKLTSFLRAQYIQYGFREVLTPSIYKKS 141

Query: 304 LWQQSGHWDSYRANMFAVK--------CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           LW+ SGHW +Y+ +M+ V+         A   I +  ++ LKPMNCPGH  +F     SY
Sbjct: 142 LWEVSGHWQNYKDDMYEVRGRGATGEQTAGTEIGEDESYGLKPMNCPGHCLLFKSQNHSY 201

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE---CLKIHNLII 412
           RELP+R A+F  ++RNE SGSL GL RVR F QDD H+FC  +Q+ +E    LK  + ++
Sbjct: 202 RELPLRYADFSPLHRNEISGSLSGLTRVRRFHQDDGHIFCRPQQIGSEIESALKFTDTVM 261

Query: 413 SIYKDFGFEKIMVKLSTRPEKR-VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
           +I   FGFE   + LSTRPE   +GS  LW+ AE  ++  L+  K+     +N     G+
Sbjct: 262 NI---FGFENYRLVLSTRPEADFIGSLELWESAERQLRNALE--KSGRSWELNE----GD 312

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH---------PVM 522
           GAFYGPK +  ++D+ G+  Q  TIQ+D NLP RF   Y  +  E+ +         PV+
Sbjct: 313 GAFYGPKIDMQVQDSDGKFHQLSTIQLDMNLPQRFELEYAVAEGEEDYNPETPGRAVPVL 372

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSS-----AVEYAQEIANLLKS 577
           IHRA+FGS+ERF  ++IE + G  P WLSP Q I+ T++       A E A    +  ++
Sbjct: 373 IHRAIFGSLERFFALLIEKYNGRWPFWLSPRQGIILTVSQDEKLLRAAEDAAAKMSGYQA 432

Query: 578 HH-----------------------LSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
           H                         SI+ D     +  KIRE    K  +I + G+K  
Sbjct: 433 HSSSEDANSTTTTGPLKPLSPARTTFSIDLDTSARPLGKKIREAKEMKYNLIFVLGEKNL 492

Query: 615 SERSIGIRRFG----------STTTQKVSLLDAIP 639
           ++ S+ +   G          S  T  + LLD  P
Sbjct: 493 ADGSVDVDLGGQMLLEKGVGNSKATNHLHLLDDTP 527


>gi|154282499|ref|XP_001542045.1| hypothetical protein HCAG_02216 [Ajellomyces capsulatus NAm1]
 gi|150410225|gb|EDN05613.1| hypothetical protein HCAG_02216 [Ajellomyces capsulatus NAm1]
          Length = 582

 Score =  248 bits (634), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 133/336 (39%), Positives = 192/336 (57%), Gaps = 25/336 (7%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHR +  E +LF  ++   G   +   G  I   L S++R +     + E+ TP +  + 
Sbjct: 94  DHRVVGTEQELFVTSQYSPGSPLFLPNGTHILNKLTSFLRAQYTQYGFLEVLTPSIYKKS 153

Query: 304 LWQQSGHWDSYRANMFAVK--------CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           LW+ SGHW +Y+ +M+ V+         A+  I +  ++ LKPMNCPGH  +F     SY
Sbjct: 154 LWKVSGHWQNYKDDMYEVRGRNATGEQTAETQIGEDESYGLKPMNCPGHCLLFKSQNHSY 213

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP+R A+F  ++RNE SGSL GL RVR F QDD H+FC  +Q+ +E         ++ 
Sbjct: 214 RELPLRYADFSPLHRNEISGSLSGLTRVRRFHQDDGHIFCRPQQIGSEIESALKFTDTVM 273

Query: 416 KDFGFEKIMVKLSTRPEKR-VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           + FGFE   + LSTRPEK  +GS  LWD AE  ++  L+  K+     +N     G+GAF
Sbjct: 274 RTFGFENYRLVLSTRPEKDFIGSVELWDSAERQLRDALE--KSGRSWELNH----GDGAF 327

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH---------PVMIHR 525
           YGPK +  ++D+ G+  Q  TIQ+D NLP RF   Y     E+ +         PV+IHR
Sbjct: 328 YGPKIDMQIQDSDGKFHQLSTIQLDMNLPQRFELEYAVPEGEEDYDPETPGRAVPVLIHR 387

Query: 526 AVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT 561
           A+FGS+ERF  ++IEN+ G  P WLSP Q I+ T++
Sbjct: 388 AIFGSLERFFALLIENYNGRWPFWLSPRQGIILTVS 423


>gi|239612679|gb|EEQ89666.1| threonyl-tRNA synthetase [Ajellomyces dermatitidis ER-3]
 gi|327351753|gb|EGE80610.1| threonyl-tRNA synthetase [Ajellomyces dermatitidis ATCC 18188]
          Length = 569

 Score =  248 bits (634), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 151/437 (34%), Positives = 226/437 (51%), Gaps = 59/437 (13%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQH 303
           DHR +    +LF  +    G   +   G  I   L S++R + I+  + E+ TP +  + 
Sbjct: 82  DHRVVGTAQELFTTSPYSPGSPLFLPNGTHILNKLTSFLRAQYIQYGFREVLTPSIYKKS 141

Query: 304 LWQQSGHWDSYRANMFAVK--------CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           LW+ SGHW +Y+ +M+ V+         A+  I +  ++ LKPMNCPGH  +F     SY
Sbjct: 142 LWEVSGHWQNYKDDMYEVRGRGATGEQTAETEIGEDESYGLKPMNCPGHCLLFKSQNHSY 201

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE---CLKIHNLII 412
           RELP+R A+F  ++RNE SGSL GL RVR F QDD H+FC  +Q+ +E    LK  + ++
Sbjct: 202 RELPLRYADFSPLHRNEISGSLSGLTRVRRFHQDDGHIFCRPQQIGSEIESALKFTDTVM 261

Query: 413 SIYKDFGFEKIMVKLSTRPEKR-VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
           +I   FGFE   + LSTRPE   +GS  LW+ AE  ++  L+  K+     +N     G+
Sbjct: 262 NI---FGFENYRLVLSTRPEADFIGSLELWESAERQLRNALE--KSGRSWELNE----GD 312

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH---------PVM 522
           GAFYGPK +  ++D+ G+  Q  TIQ+D NLP RF   Y  +  E+ +         PV+
Sbjct: 313 GAFYGPKIDMQVQDSDGKFHQLSTIQLDMNLPQRFELEYAVAEGEEDYNPETPGRAVPVL 372

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSS-----AVEYAQEIANLLKS 577
           IHRA+FGS+ERF  ++IE + G  P WLSP Q I+ T++       A E A    +  ++
Sbjct: 373 IHRAIFGSLERFFALLIEKYNGRWPFWLSPRQGIILTVSQDEKLLRAAEDAAAKMSGYQA 432

Query: 578 HH-----------------------LSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
           H                         SI+ D     +  KIRE    K  +I + G+K  
Sbjct: 433 HSSSEDANSTTTTGPLKPLSPARTTFSIDLDTSARPLGKKIREAKEMKYNLIFVLGEKNL 492

Query: 615 SERSIGIRRFGSTTTQK 631
           ++ S+ +   G    +K
Sbjct: 493 ADGSVDVDLGGQMLLEK 509


>gi|326471753|gb|EGD95762.1| threonyl-tRNA synthetase [Trichophyton tonsurans CBS 112818]
          Length = 511

 Score =  248 bits (634), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 153/436 (35%), Positives = 224/436 (51%), Gaps = 47/436 (10%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHR L    DLF  +    G   +   G  I   LI+++R + K   + E+ TP +  Q 
Sbjct: 45  DHRALGTAQDLFTNSIYSPGSPLFRPNGTHILNKLITFLRAQYKQYGFREVLTPNIYKQS 104

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRT-----FALKPMNCPGHVAVFNHGLKSYREL 358
           LW+ SGHW +Y+ +M+ V    DT +   T     + LKPMNCPGH  +F     SYREL
Sbjct: 105 LWEVSGHWQNYKDDMYEVGGRGDTGETSETSENEIYGLKPMNCPGHCLLFKSQKHSYREL 164

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           PVR A+F  ++RNE SGSL GL RVR F QDD H+FC   Q+ +E         ++ + F
Sbjct: 165 PVRYADFSPLHRNEVSGSLSGLTRVRRFHQDDGHIFCRPGQIGSEIQLALKFADTVLQTF 224

Query: 419 GF-EKIMVKLSTRPEKR-VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           G  +   + LSTRPEK  +GS   W++AE  ++  LD    S +  +N     G+GAFYG
Sbjct: 225 GLADGYRLVLSTRPEKDFIGSLEQWENAEQQLRQALDNSGLSWE--LNE----GDGAFYG 278

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFY-VNSHSE--------KCHPVMIHRAV 527
           PK +  ++D+ G+  Q  TIQ+D NLP RF   Y V   SE        +  PV+IHRA+
Sbjct: 279 PKIDLQIQDSQGKYHQLSTIQLDMNLPQRFELEYLVPEGSEEYDPATGGRATPVLIHRAI 338

Query: 528 FGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH-------- 579
           FGS+ERF  ++IE + G  P WLSP QAI+ TI     + A++    +            
Sbjct: 339 FGSLERFFALLIERYNGQWPFWLSPRQAILLTIGKGLEQAAEDAVAKISGFEPITSSRPS 398

Query: 580 ------------LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI----RR 623
                        +++ D  + ++  KI +    +  ++ I G K  ++ S+ I    + 
Sbjct: 399 STGLPLSPLQPTFNVDLDLASRSLPKKIHDAHAARYNLVFIMGPKNVADGSVDIDLSGQV 458

Query: 624 FGSTTTQKVSLLDAIP 639
            G +  +  +LLD IP
Sbjct: 459 GGKSEDEIKALLDGIP 474


>gi|296820624|ref|XP_002849971.1| threonyl-tRNA synthetase [Arthroderma otae CBS 113480]
 gi|238837525|gb|EEQ27187.1| threonyl-tRNA synthetase [Arthroderma otae CBS 113480]
          Length = 520

 Score =  247 bits (631), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 149/433 (34%), Positives = 223/433 (51%), Gaps = 44/433 (10%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHR L    +LF  +    G   +   G  I   LIS++R + +   + E+ TP +  Q 
Sbjct: 57  DHRALGTAQELFTNSIYSPGSPLFRPNGTHILNKLISFLRAQYRQYGFREVLTPNIYKQS 116

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIK--DLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           LW+ SGHW +Y+ +M+ V    +T +  +  T+ LKPMNCPGH  +F     SYRELPVR
Sbjct: 117 LWEVSGHWQNYKDDMYEVGGRGNTAEATEDETYGLKPMNCPGHCLLFKSQKHSYRELPVR 176

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF- 420
            A+F  ++RNE SGSL GL RVR F QDD H+FC   Q+  E         ++ + FG  
Sbjct: 177 YADFSPLHRNEVSGSLSGLTRVRRFHQDDGHIFCRPGQIGGEIQLALKFADTVLQTFGLA 236

Query: 421 EKIMVKLSTRPEKR-VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           +   + LSTRPEK  +G    W++AE  ++  LD    S +  +N     G+GAFYGPK 
Sbjct: 237 DGYRLVLSTRPEKDFIGCLEQWENAEQQLRQALDDSGLSWE--LNE----GDGAFYGPKI 290

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFY-VNSHSE--------KCHPVMIHRAVFGS 530
           +  ++D+ G+  Q  TIQ+D NLP RF   Y V   SE        +  PV+IHRA+FGS
Sbjct: 291 DLQIQDSQGKYHQLSTIQLDMNLPQRFELEYLVPEGSEEYDPATGGRATPVLIHRAIFGS 350

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH----------- 579
           +ERF  ++IE + G  P WLSP QAI+ T+     + A+++   +               
Sbjct: 351 LERFFALLIERYSGQWPFWLSPRQAILLTVGKGLEQAAEDVVAKISGFEPITASRPSKSG 410

Query: 580 ---------LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
                     +++ D  + ++  KI +    +  ++ I G K  +  S+ I   G  ++Q
Sbjct: 411 LPLSPLQPTFNVDLDLASRSLPKKIHDAHTARYNLVFIMGPKNLANGSVDIDFSGQVSSQ 470

Query: 631 K----VSLLDAIP 639
                 +LLD +P
Sbjct: 471 SEDEIKALLDGVP 483


>gi|12045236|ref|NP_073047.1| threonyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|1351178|sp|P47615|SYT_MYCGE RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|3844963|gb|AAC71602.1| threonyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|166078630|gb|ABY79248.1| threonyl-tRNA synthetase [synthetic Mycoplasma genitalium JCVI-1.0]
          Length = 564

 Score =  247 bits (630), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 157/521 (30%), Positives = 271/521 (52%), Gaps = 27/521 (5%)

Query: 102 DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEI 161
           D FY DF   + FS+ + A+IE  +  + ++     ++++S ++A   FE+  +  K  +
Sbjct: 29  DEFYLDFYINENFSTKQFAKIESDLNSLSSKLEGISQKFVSLDEALSFFEND-QFTKNLL 87

Query: 162 LESIPAKENVTLYRQGE-WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRI 220
            +S   K  +T +     W +      ++     K F KL+ V+  Y+ GD ++  L RI
Sbjct: 88  KKSNLNKFKITFFENKHFWIEDLTLTFIK-----KSFIKLLNVSVNYFLGDPSQLQLQRI 142

Query: 221 YGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTL 279
            G    +++EL Q +   EE  K+DHR L ++++LF      G+G+  W  KG  +   +
Sbjct: 143 NGIFAQSKKELEQLIKENEERLKKDHRSLGKQLELFSFDPLIGAGLPIWLAKGTTLRNII 202

Query: 280 ISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMF-AVKCADDTIKDLRTFALK 337
            +++  +++   +  + +P + +  L++ SGH+  Y+ +MF A+K       D +   L+
Sbjct: 203 GNFVHHQQLLFGFNTVCSPVLANIELFKISGHYQHYKEDMFPAIKL------DSQAMMLR 256

Query: 338 PMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK 397
           PM CP H  +F     SY+++P R +E   ++R E SG L GL RVR  T  D H+FC  
Sbjct: 257 PMTCPHHCLIFKQKRYSYKKMPQRFSEDSILHRFEASGGLIGLERVRCMTLLDNHIFCRA 316

Query: 398 EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGVLD 453
           +Q+ +E     NLI  + K FGF    + LS    K     + +  LW ++E+ M+ VL 
Sbjct: 317 DQIKSEIKNAFNLIQKVNKKFGFIFDRIDLSLHDPKNQSKFIDNPGLWRESESQMENVLK 376

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS 513
            +    Q  I      G  AFYGPK ++  K    +     TIQ+DF LP +F+  Y++ 
Sbjct: 377 DLNIQYQKEI------GAAAFYGPKIDFQFKTIFKKMITIATIQLDFLLPEKFDLTYIDK 430

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIA 572
            +    PV+IH  + G+ ERFI  ++E   GN PLWL+P+QA++  +     ++ A+++ 
Sbjct: 431 KNTLKKPVIIHVGIIGTYERFIAALLEKTSGNFPLWLAPVQAVIIPVNIQKHLKAAKKLY 490

Query: 573 NLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
           N L   ++ +  D   + +  K+R+  I+KIP+ +I GDKE
Sbjct: 491 NKLLKENIRVNLDDNQDRLAKKVRQAIIEKIPLQLIVGDKE 531


>gi|119573935|gb|EAW53550.1| threonyl-tRNA synthetase-like 1, isoform CRA_c [Homo sapiens]
          Length = 344

 Score =  246 bits (629), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 128/301 (42%), Positives = 179/301 (59%), Gaps = 9/301 (2%)

Query: 324 ADDTIKDLR-TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMR 382
           +DD+ + +  T ALKPMNCP H  +F H  +S+RELP+RLA+FG+++R E SG L GL R
Sbjct: 17  SDDSTRHITDTLALKPMNCPAHCLMFAHRPRSWRELPLRLADFGALHRAEASGGLGGLTR 76

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWD 442
           +R F QDDAH+FCT +Q+  E     + + S+Y   GF    + LSTRP   +G   LWD
Sbjct: 77  LRCFQQDDAHIFCTTDQLEAEIQSCLDFLRSVYAVLGF-SFRLALSTRPSGFLGDPCLWD 135

Query: 443 DAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNL 502
            AE ++K  L          +N+G    +GAFYGPK +  L DA+GR  QCGTIQ+DF L
Sbjct: 136 QAEQVLKQALKEFGEPWD--LNSG----DGAFYGPKIDVHLHDALGRPHQCGTIQLDFQL 189

Query: 503 PSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITS 562
           P RF+  Y         PV+IHRAV GS+ER +G++ E+  G  PLWLSP Q +V  + S
Sbjct: 190 PLRFDLQYKGQAGALERPVLIHRAVLGSVERLLGVLAESCGGKWPLWLSPFQVVVIPVGS 249

Query: 563 SAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGI 621
              EYA+E    L++  L  + D  +  T++ +IR   +       + G KE S+R++ I
Sbjct: 250 EQEEYAKEAQQSLRAAGLVSDLDADSGLTLSRRIRRAQLAHYNFQFVVGQKEQSKRTVNI 309

Query: 622 R 622
           R
Sbjct: 310 R 310


>gi|311273543|ref|XP_003133916.1| PREDICTED: threonyl-tRNA synthetase, cytoplasmic-like [Sus scrofa]
          Length = 328

 Score =  246 bits (629), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 127/291 (43%), Positives = 180/291 (61%), Gaps = 9/291 (3%)

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
           FALKPMNCPGH  +F+H  +S+RELP+R+A+FG ++RNE SG+L GL RVR F QDDAH+
Sbjct: 11  FALKPMNCPGHCLMFDHRPRSWRELPLRIADFGVLHRNELSGALTGLTRVRRFQQDDAHI 70

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
           FC  EQ+ +E     + + ++Y  FGF    + LSTRPEK +G   +W+ AE  ++  L+
Sbjct: 71  FCAMEQIEDEIKGCLDFLRTVYSIFGF-SFKLNLSTRPEKFLGDIEVWNQAEKQLENSLN 129

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS 513
                 +  +N     G+GAFYGPK +  +KDAIGR  QC TIQ+D  LP RFN  +V+ 
Sbjct: 130 EFGEKWE--LNP----GDGAFYGPKIDIQIKDAIGRYHQCATIQLDXQLPIRFNLTFVSP 183

Query: 514 HS-EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIA 572
              +K  PV+IHRA+ GS+ER I I+ EN+ G  P WLSP Q +V  +  +  EYAQ++ 
Sbjct: 184 DGDDKKRPVIIHRAILGSVERMIAILTENYGGKWPFWLSPRQVMVVPVGPTCDEYAQKVQ 243

Query: 573 NLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
                    ++ D     T+N KIR   + +   I++ G+KE S  ++ IR
Sbjct: 244 QQFHDAKFMVDIDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKSSGTVNIR 294


>gi|238484021|ref|XP_002373249.1| threonyl-tRNA synthetase [Aspergillus flavus NRRL3357]
 gi|220701299|gb|EED57637.1| threonyl-tRNA synthetase [Aspergillus flavus NRRL3357]
          Length = 526

 Score =  246 bits (629), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 148/417 (35%), Positives = 214/417 (51%), Gaps = 50/417 (11%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQH 303
           D+R L    DLF  +    G   +   G  +   L+S++R + ++  + E+ TP +  + 
Sbjct: 61  DYRALGTAQDLFTTSIYSPGSPLFLPNGTHVINKLVSFLRTQYLQYGFREVLTPTIYKRS 120

Query: 304 LWQQSGHWDSYRANMFAVKC------ADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           LW+ SGHW +Y+ +M+ V+        +    +  ++ LKPMNCPGH  +F     SYRE
Sbjct: 121 LWEVSGHWQNYKDDMYEVRGRGAMGETEGEAGEDESYGLKPMNCPGHCLLFKSQNHSYRE 180

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R A+F  ++RNE SGSL GL RVR F QDD H+FC  +Q+ +E       +  +   
Sbjct: 181 LPIRYADFSPLHRNEVSGSLSGLTRVRRFHQDDGHIFCRPQQIKSEIASALGFVDMVMTT 240

Query: 418 FGFEKIMVKLSTRPEKR-VGSDALWDDAENIMKGVLDTIKNSSQD-RINTGVLLGEGAFY 475
           FG     + LSTRPEK  +GS  LWD AE+ ++  LD   NS ++  +N     G+GAFY
Sbjct: 241 FGLGPYRLVLSTRPEKDFIGSLELWDSAESQLREALD---NSGREWALNE----GDGAFY 293

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE---------KCHPVMIHRA 526
           GPK +  L+D  G+  Q  TIQ+D NLP RF   Y  +  E         +  PV++HRA
Sbjct: 294 GPKIDIQLQDQAGKYHQLSTIQLDMNLPQRFGLEYQVAEGEEDYNPATPGRARPVLVHRA 353

Query: 527 VFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSS------------------AVEYA 568
            FGSIERF+ ++IE + G  P WLSP Q IV T+                     A+E  
Sbjct: 354 NFGSIERFLALLIEQYAGRWPFWLSPRQGIVLTVNQDEKVLQQAHEAAAKISGFRALEPG 413

Query: 569 QEIAN------LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSI 619
           Q   N       + S  L I+ D   +T+  KI+     K   I I G K+ +E  +
Sbjct: 414 QSGNNAPQPLSFVDSTFL-IDVDDSPQTLGKKIQRAKQMKYNFIFIVGPKDVAESRV 469


>gi|169767186|ref|XP_001818064.1| threonyl-tRNA synthetase [Aspergillus oryzae RIB40]
 gi|83765919|dbj|BAE56062.1| unnamed protein product [Aspergillus oryzae]
          Length = 526

 Score =  246 bits (628), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 148/417 (35%), Positives = 214/417 (51%), Gaps = 50/417 (11%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQH 303
           D+R L    DLF  +    G   +   G  +   L+S++R + ++  + E+ TP +  + 
Sbjct: 61  DYRALGTAQDLFTTSIYSPGSPLFLPNGTHVINKLVSFLRTQYLQYGFREVLTPTIYKRS 120

Query: 304 LWQQSGHWDSYRANMFAVKC------ADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           LW+ SGHW +Y+ +M+ V+        +    +  ++ LKPMNCPGH  +F     SYRE
Sbjct: 121 LWEVSGHWQNYKDDMYEVRGRGAMGETEGEAGEDESYGLKPMNCPGHCLLFKSQNHSYRE 180

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R A+F  ++RNE SGSL GL RVR F QDD H+FC  +Q+ +E       +  +   
Sbjct: 181 LPIRYADFSPLHRNEVSGSLSGLTRVRRFHQDDGHIFCRPQQIKSEIASALGFVDMVMTT 240

Query: 418 FGFEKIMVKLSTRPEKR-VGSDALWDDAENIMKGVLDTIKNSSQD-RINTGVLLGEGAFY 475
           FG     + LSTRPEK  +GS  LWD AE+ ++  LD   NS ++  +N     G+GAFY
Sbjct: 241 FGLGPYRLVLSTRPEKDFIGSLELWDSAESQLREALD---NSGREWALNE----GDGAFY 293

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE---------KCHPVMIHRA 526
           GPK +  L+D  G+  Q  TIQ+D NLP RF   Y  +  E         +  PV++HRA
Sbjct: 294 GPKIDIQLQDQAGKYHQLSTIQLDMNLPQRFGLEYQVAEGEEDYNPATPGRARPVLVHRA 353

Query: 527 VFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSS------------------AVEYA 568
            FGSIERF+ ++IE + G  P WLSP Q IV T+                     A+E  
Sbjct: 354 NFGSIERFLALLIEQYAGRWPFWLSPRQGIVLTVNQDEKVLQQAHEAAAKISGFRALEPG 413

Query: 569 QEIAN------LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSI 619
           Q   N       + S  L I+ D   +T+  KI+     K   I I G K+ +E  +
Sbjct: 414 QSGNNAPQPLSFVDSTFL-IDVDDSPQTLGKKIQRAKQMKYNFIFIVGPKDVAESRV 469


>gi|310789927|gb|EFQ25460.1| threonyl-tRNA synthetase [Glomerella graminicola M1.001]
          Length = 526

 Score =  246 bits (628), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 143/450 (31%), Positives = 222/450 (49%), Gaps = 73/450 (16%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQ 298
           E +  DHRKL    +LF  +    G   +   G ++F  L+ ++RR+ +   +EE+ TP 
Sbjct: 48  EHDLPDHRKLGIRQELFTTSVYSPGSPIFLPNGTRVFNRLVDFLRRQYVHYGFEEVITPN 107

Query: 299 VLDQHLWQQSGHWDSYRANMFAVK-------------CADD--------TIKDLRT---- 333
           +  + LW++SGH  +Y  +M+ V              C  D        + +  RT    
Sbjct: 108 IYKKSLWERSGHLQNYADDMYTVTSRARAPEEKAAGCCGADGRSPPHEGSGETARTAEGE 167

Query: 334 ---FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
              + LKPMNCPGH  +F    +SYR+LP+R A+F  ++RNE SG+L GL RVR F QDD
Sbjct: 168 DDDYGLKPMNCPGHCLIFASKTRSYRDLPIRFADFSPLHRNEISGALSGLTRVRRFHQDD 227

Query: 391 AHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP-EKRVGSDALWDDAENIMK 449
            H+FC   Q+  E  K  + + ++Y   G +     LSTRP +  +G+DA W+ AE  ++
Sbjct: 228 GHIFCRPIQIREEVFKTLDFMKTVYGALGLDYFDFALSTRPADHYIGTDAEWERAEGQLR 287

Query: 450 GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAF 509
             L+      Q  +   V  G+GAFYGPK + +L D+ G+  Q GTIQ+DF LP RFN  
Sbjct: 288 DALE------QAGLKYTVKEGDGAFYGPKIDVMLHDSHGKSHQAGTIQLDFQLPQRFNLE 341

Query: 510 YVNSHSE--------------------KCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW 549
           Y     +                       PVM+HRA+ GS+ER + ++IE +KG  P W
Sbjct: 342 YKAPAPKLEAQGLPLEKADPAELETYGSVTPVMVHRAILGSVERLMALLIEEYKGKWPFW 401

Query: 550 LSPIQAIVTTI--TSSAVEYAQEIANLLKSHH---------------LSIETDFRNETIN 592
           L+P Q ++ T+  T   V +A EI + L  H                 +++ D    ++ 
Sbjct: 402 LNPRQCVILTLNDTEPVVRWASEIKDTLTGHDRVRDPNKPVQPRPTGFAVDIDVSPRSLQ 461

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIR 622
            K+ E   K   +I + G K    +++ ++
Sbjct: 462 KKLAEAIEKGYGLIAVVGKKNVENQTVTVQ 491


>gi|327293177|ref|XP_003231285.1| threonyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
 gi|326466401|gb|EGD91854.1| threonyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
          Length = 526

 Score =  244 bits (624), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 153/440 (34%), Positives = 223/440 (50%), Gaps = 55/440 (12%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHR L    DLF  +    G   +   G  I   LI+++R + K   + E+ TP +  Q 
Sbjct: 60  DHRALGTAQDLFTNSIYSPGSPLFRPNGTHILNKLITFLRAQYKQYGFREVLTPNIYKQS 119

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRT-----FALKPMNCPGHVAVFNHGLKSYREL 358
           LW+ SGHW +Y+ +M+ V    DT     T     + LKPMNCPGH  +F     SYREL
Sbjct: 120 LWEVSGHWQNYKDDMYEVGGRGDTGDTGETSENEIYGLKPMNCPGHCLLFKSQKHSYREL 179

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           PVR A+F  ++RNE SGSL GL RVR F QDD H+FC   Q+ +E         ++ + F
Sbjct: 180 PVRYADFSPLHRNEVSGSLSGLTRVRRFHQDDGHIFCRPGQIGSEIQLALKFADTVLQTF 239

Query: 419 GF-EKIMVKLSTRPEKR-VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL----GEG 472
           G  +   + LSTRPEK  +GS   W++AE  ++  LD          N+G+      G+G
Sbjct: 240 GLADGYRLVLSTRPEKDFIGSLEQWENAEQQLRQALD----------NSGLSWELNEGDG 289

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFY-VNSHSE--------KCHPVMI 523
           AFYGPK +  ++D+ G+  Q  TIQ+D NLP RF   Y V   SE        +  PV+I
Sbjct: 290 AFYGPKIDLQIQDSQGKYHQLSTIQLDMNLPQRFELDYLVPEGSEEYDPATGGRATPVLI 349

Query: 524 HRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH---- 579
           HRA+FGS+ERF  ++IE + G  P WLSP QAI+ TI     + A++    +        
Sbjct: 350 HRAIFGSLERFFALLIERYNGQWPFWLSPRQAILLTIGKGLEQTAEDAVAKISGFEPITS 409

Query: 580 ----------------LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI-- 621
                            +++ D  + ++  KI +    +  ++ I G K  ++ S+ I  
Sbjct: 410 SRPSSTGLPLSPLQPTFNVDLDLASRSLPKKIHDAHAARYNLVFIMGPKNVADGSVDIDL 469

Query: 622 --RRFGSTTTQKVSLLDAIP 639
             +  G +  +  +LLD IP
Sbjct: 470 SGQVGGKSEDEIKALLDGIP 489


>gi|145534462|ref|XP_001452975.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124420675|emb|CAK85578.1| unnamed protein product [Paramecium tetraurelia]
          Length = 1348

 Score =  243 bits (621), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 131/385 (34%), Positives = 219/385 (56%), Gaps = 12/385 (3%)

Query: 49  DLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD 107
           DL+ P+  +  +E+++ +D     V  HS +HI+  A++ ++    + IGP I+ GF+YD
Sbjct: 134 DLTRPLEGDCQLELLSFDDNNGKEVFWHSSSHILGSALEEVYG-CHLCIGPAIDGGFFYD 192

Query: 108 -FDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIP 166
            +  +   + ++  +IEK   ++ A    F +  L+ ++  ELF +     ++ I   IP
Sbjct: 193 CYIGDYKVTQNDYVKIEKAASDLAASKQEFQRAVLTKDECLELFGTNPFKRQL-ITNKIP 251

Query: 167 AKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWN 226
                T Y+ G   DLC GPH+ +T  VK F ++ K + AYW G +    L R+YG ++ 
Sbjct: 252 EGAMTTAYKCGNLIDLCTGPHLPNTSYVKAF-QVTKNSAAYWLGKNTNDDLQRVYGVSFP 310

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +++ L +Y+   +E   RDHR + ++ +L+   +   G  F++  G  I+ TL++++RR+
Sbjct: 311 SKKLLDEYVKIQKELALRDHRNVGKKQNLYLFHQLSPGSAFFYPSGAHIYNTLMNFLRRQ 370

Query: 287 IK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
                Y+E+ +P + +  LW+ SGH+D Y+ N+F +   ++       + LKPMNCPGH 
Sbjct: 371 YYIRGYQEVISPNIFNAQLWKISGHYDKYKENLFFINMGEEG-----EYGLKPMNCPGHC 425

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +F+    SYR+LPVR A+FG ++RNE  G+L GL RVR F QDDAH+FC  +Q+  E  
Sbjct: 426 LMFDMIQHSYRDLPVRFADFGVLHRNEVHGALSGLTRVRRFQQDDAHIFCRMDQIQEEIK 485

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTR 430
              + +  IY  FGFE   + LSTR
Sbjct: 486 SCLDFLSYIYSLFGFE-FKLYLSTR 509


>gi|284931186|gb|ADC31124.1| threonyl-tRNA synthetase [Mycoplasma gallisepticum str. F]
          Length = 573

 Score =  243 bits (620), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 159/565 (28%), Positives = 283/565 (50%), Gaps = 24/565 (4%)

Query: 90  PEVQVAIGPIIEDGFYYDF-DKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE 148
           P ++     + + GFY D+  +    + ++  ++ K + ++ +   P   + +  + A +
Sbjct: 21  PSIKFGQMSVNDQGFYLDYLSQTLNINPEDFNKLIKSLAKLCSSAQPISLKTVDLKIANQ 80

Query: 149 LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYW 208
           L     + Y +E++     K           + L     V +T  VK F     V GAY+
Sbjct: 81  LLSD--QPYLLELINEAKEKTVNLATVDNHHYYLPMAQLVDNTKLVKAF-NFQSVGGAYF 137

Query: 209 RGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAE-DGSGVIF 267
           +GD +  ++ R+ G  +   + +  YL  +EE ++RDHR++ + ++LF   +  G G+  
Sbjct: 138 KGDKDNLVMVRLNGFGFENDKVMQDYLEIIEEQKQRDHRRINKILELFTFNQLAGPGMPI 197

Query: 268 WHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADD 326
           W   G  + Q +  Y+   + K  +  +NTP + +  L+++SGH++ Y  +MF      D
Sbjct: 198 WLPNGQIVRQLIGDYVHSVQKKFGFMAVNTPILGNVDLYKKSGHYNHYAKDMFPELALLD 257

Query: 327 TIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
             K      L+PM CP H  V+ +  ++Y +LP+RL+E   ++R E SG L GL RVR  
Sbjct: 258 GDK----MMLRPMTCPHHCLVYLNKPRNYYDLPMRLSEDALLHRYEASGGLTGLERVRAM 313

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG--FEKIMVKLSTRPEKR--VGSDALWD 442
           T  D H+FC  +Q+  E L  + +I  +   F   F +I + L    +K+  + ++ +W 
Sbjct: 314 TLLDNHIFCRLDQIKTEILNAYQVIKEVIGTFNLKFHRIDLSLHDPNDKQSFIDNEQMWA 373

Query: 443 DAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNL 502
            +EN ++  L  +      ++      GE AFYGPK ++ +K A+ +     TIQ+DF+L
Sbjct: 374 RSENQLEDALKDLGLEYTKQV------GEAAFYGPKIDFQVKTALNKIITVSTIQLDFSL 427

Query: 503 PS--RFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTI 560
           PS  +F+  Y    +     V+IH  + G+ ERF+  ++E  KG L LWL+P QA++  +
Sbjct: 428 PSEEKFDIKYKTKDNTYEQGVIIHLGIIGTYERFVATLLEQTKGALDLWLAPKQAVIIPV 487

Query: 561 TSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERS- 618
            +S  +E   ++   L +  L +  D R+E +N KIR+H + KIP+ II GD E      
Sbjct: 488 NNSVHLEGCNQLLEKLLAKDLRVTVDSRDERLNKKIRDHQVNKIPVQIIVGDNELKNPDL 547

Query: 619 IGIRRFGSTTTQKVSLLDAIPILTK 643
           I  R +G   + ++ L   I +  K
Sbjct: 548 ITYRLYGQEDSNQLELTKFIELFKK 572


>gi|31544379|ref|NP_852957.1| threonyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)]
 gi|81572846|sp|Q7NBT5|SYT_MYCGA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|31541223|gb|AAP56525.1| threonyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)]
 gi|284930421|gb|ADC30360.1| threonyl-tRNA synthetase [Mycoplasma gallisepticum str. R(high)]
          Length = 573

 Score =  243 bits (620), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 159/565 (28%), Positives = 283/565 (50%), Gaps = 24/565 (4%)

Query: 90  PEVQVAIGPIIEDGFYYDF-DKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE 148
           P ++     + + GFY D+  +    + ++  ++ K + ++ +   P   + +  + A +
Sbjct: 21  PSIKFGQMSVNDQGFYLDYLSQTLNINPEDFNKLIKSLAKLCSSAQPISLKTVDLKIANQ 80

Query: 149 LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYW 208
           L     + Y +E++     K           + L     V +T  VK F     V GAY+
Sbjct: 81  LLSD--QPYLLELINEAKEKTVNLATVDNHHYYLPMAQLVDNTKLVKAF-NFQSVGGAYF 137

Query: 209 RGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAE-DGSGVIF 267
           +GD +  ++ R+ G  +   + +  YL  +EE ++RDHR++ + ++LF   +  G G+  
Sbjct: 138 KGDKDNLVMVRLNGFGFENDKVMQDYLEIIEEQKQRDHRRINKILELFTFNQLAGPGMPI 197

Query: 268 WHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADD 326
           W   G  + Q +  Y+   + K  +  +NTP + +  L+++SGH++ Y  +MF      D
Sbjct: 198 WLPNGQIVRQLIGDYVHSVQKKFGFMAVNTPILGNVDLYKKSGHYNHYAKDMFPELALLD 257

Query: 327 TIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
             K      L+PM CP H  V+ +  ++Y +LP+RL+E   ++R E SG L GL RVR  
Sbjct: 258 GDK----MMLRPMTCPHHCLVYLNKPRNYYDLPMRLSEDALLHRYEASGGLTGLERVRAM 313

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG--FEKIMVKLSTRPEKR--VGSDALWD 442
           T  D H+FC  +Q+  E L  + +I  +   F   F +I + L    +K+  + ++ +W 
Sbjct: 314 TLLDNHIFCRLDQIKTEILNAYQVIKEVIGTFNLKFHRIDLSLHDPNDKQSFIDNEQMWA 373

Query: 443 DAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNL 502
            +EN ++  L  +      ++      GE AFYGPK ++ +K A+ +     TIQ+DF+L
Sbjct: 374 RSENQLEDALKDLGLEYTKQV------GEAAFYGPKIDFQVKTALNKIITVSTIQLDFSL 427

Query: 503 PS--RFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTI 560
           PS  +F+  Y    +     V+IH  + G+ ERF+  ++E  KG L LWL+P QA++  +
Sbjct: 428 PSEEKFDIKYKTKDNTYEQGVIIHLGIIGTYERFVATLLEQTKGALDLWLAPKQAVIIPV 487

Query: 561 TSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERS- 618
            +S  +E   ++   L +  L +  D R+E +N KIR+H + KIP+ II GD E      
Sbjct: 488 NNSVHLEGCNQLLEKLLARDLRVTVDSRDERLNKKIRDHQVNKIPVQIIIGDNELKNPDL 547

Query: 619 IGIRRFGSTTTQKVSLLDAIPILTK 643
           I  R +G   + ++ L   I +  K
Sbjct: 548 ITYRLYGQEDSNQLELTKFIELFKK 572


>gi|312601535|gb|ADQ90790.1| Threonyl-tRNA synthetase [Mycoplasma hyopneumoniae 168]
          Length = 370

 Score =  243 bits (619), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 127/356 (35%), Positives = 205/356 (57%), Gaps = 17/356 (4%)

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMF-AVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
           ++E+ TP    + L++ SGH   YR +MF  +K  ++ +        +PM CP H+ +F+
Sbjct: 20  FKEVLTPHFGHKELYKISGHLLHYRDDMFKGLKIENEEL------IPRPMTCPHHIILFS 73

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
             L SYR LP R++E   +YR E SG+L GL RVR     + H+F +K Q+F+E   +  
Sbjct: 74  QQLFSYRNLPYRISEQSRLYRYEKSGALLGLERVRAMDLTEGHIFVSKSQIFSEISHLFQ 133

Query: 410 LIISIYKDFGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
           +I  +   F  +   +  S R     +K    D +WD AE  +K  L+      Q++IN 
Sbjct: 134 MISEVLDFFKVQIFYISFSKRDPKNKDKFFQDDQMWDQAEADLKQFLE------QNKINY 187

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
              +GE AFYGPK ++ +K A+ ++    T+Q+DF LP +F   ++N H++K  P++IHR
Sbjct: 188 IEKIGEAAFYGPKIDFQVKTALNKELTISTLQLDFLLPEKFKISFINEHNKKETPILIHR 247

Query: 526 AVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD 585
            + G+ ERFI +++E  KGNLP W+SP Q IV  +     ++AQ+I  +L     + E D
Sbjct: 248 GLIGTYERFIALLLEQSKGNLPFWISPKQIIVIPVAEKHNDFAQKIHKILFDLGFNSEID 307

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            R+E I+ KIRE +++KI   +I GD+E ++  I  R+FGS    ++SL+D + +L
Sbjct: 308 LRSERISRKIREANLEKINFQVIIGDEEITKNEITYRKFGSPELFRISLVDFVDLL 363


>gi|224027144|ref|ZP_03645510.1| hypothetical protein BACCOPRO_03905 [Bacteroides coprophilus DSM
           18228]
 gi|224020380|gb|EEF78378.1| hypothetical protein BACCOPRO_03905 [Bacteroides coprophilus DSM
           18228]
          Length = 326

 Score =  243 bits (619), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 127/331 (38%), Positives = 200/331 (60%), Gaps = 9/331 (2%)

Query: 39  VAVAINGKVCDLSDPVREGSIEIITP-EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIG 97
           +A  +NG+  DL+ P+ E +  ++   ED        H+ AH++AEA+Q ++P +Q  IG
Sbjct: 1   MACGVNGETIDLNRPISEDANFVLYKWEDEEGKHAFWHTSAHLLAEALQELYPGIQFGIG 60

Query: 98  PIIEDGFYYDFDK-EQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEA 156
           P IE+GFYYD D  E      +L  IEKKM E+ A+    ++Q ++ + A ++F  + E 
Sbjct: 61  PAIENGFYYDVDPGEAVIKEGDLPAIEKKMAELAAKKETLVRQSIAKDDALKMFGERGET 120

Query: 157 YKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPM 216
           YK E++  +    ++T Y QG + DLCRGPH+ ST  +K   KL+ VAGAYWRG  +R  
Sbjct: 121 YKCELISEL-EDGHITTYTQGAFTDLCRGPHLMSTAPIKAI-KLLSVAGAYWRGQEDRKQ 178

Query: 217 LSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKI 275
           ++RIYG  +  ++ L +YL  LEE++KRDHRK+ +EMDLF  ++  G G+  W  KG  +
Sbjct: 179 MTRIYGITFPKKKMLDEYLVMLEEAKKRDHRKIGKEMDLFMFSDTVGKGLPMWLPKGTAL 238

Query: 276 FQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
              L  ++RR + + DY+E+  P + ++ L+  SGH+  Y  + F       T ++   +
Sbjct: 239 RLRLQDFLRRIQARYDYQEVICPPIGNKLLYVTSGHYAKYGKDAFQ---PIHTPEEGEEY 295

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEF 365
            LKPMNCP H  ++ +  +SYR+LP+R+AEF
Sbjct: 296 FLKPMNCPHHCMIYKNSPRSYRDLPLRIAEF 326


>gi|156053914|ref|XP_001592883.1| hypothetical protein SS1G_05805 [Sclerotinia sclerotiorum 1980]
 gi|154703585|gb|EDO03324.1| hypothetical protein SS1G_05805 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 536

 Score =  242 bits (618), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 143/433 (33%), Positives = 226/433 (52%), Gaps = 51/433 (11%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHR+L  E +LF  +    G   +  KG ++F+ L  ++  +     +EE+ TP +  + 
Sbjct: 64  DHRQLGIEQELFTTSPYSPGSPLFLPKGARMFKALTEFLSAQYSHFGFEEVITPTIYKKS 123

Query: 304 LWQQSGHWDSYRANMFAV---KCADDTIKDLR----TFALKPMNCPGHVAVFNHGLKSYR 356
           LW++SGHW++Y  +M++V     + +T++  +     + LKPMNCPGH  +F    +SYR
Sbjct: 124 LWEKSGHWENYAEDMYSVIGRGASGETVEGQKGENEEYGLKPMNCPGHCLIFASKQRSYR 183

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           E+P+R  +F  ++RNE SG+L GL RVR F QDD H+FC   Q+  E  K    +   Y 
Sbjct: 184 EMPIRYTDFSPLHRNEISGALSGLTRVRRFHQDDGHIFCRPSQIKEEISKTLEFVKMTYS 243

Query: 417 DFGFE-KIMVKLSTRP-EKRVGSDALWDDAENIMKGVLDTIKNSSQD-RINTGVLLGEGA 473
             G      + LSTRP +  +G+   WD+AE  +K  LD   NS ++  +N     G+GA
Sbjct: 244 TLGLGMNYRLVLSTRPSDHYIGTKEEWDNAEKALKQSLD---NSGREWTMNE----GDGA 296

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFY------VNSHSEKCH-------- 519
           FYGPK + ILKD+ G++ Q  TIQ+DF LP RF   Y      + +  E  H        
Sbjct: 297 FYGPKIDIILKDSDGKEHQTATIQLDFQLPKRFELEYQAPAPEIEAKGEITHDPILLAKQ 356

Query: 520 ----PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLL 575
               PV+IHRA+ GS+ER + ++IE++ G  P WL+P +  + T+  S V          
Sbjct: 357 GPVTPVLIHRAILGSVERMMALLIEHYNGRWPFWLNPSKVTILTVNDSEVVVKYAKVVKK 416

Query: 576 K----SHH-----------LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
           +    SHH           + IE D    ++  KI E   K+   II+ G++   ++++ 
Sbjct: 417 QLAHHSHHNLFPRSRHAVEIPIELDDSPRSLKKKISEAKRKRYGAIIVIGNQNVDDKTVT 476

Query: 621 IRRFGSTTTQKVS 633
           +   G   ++ +S
Sbjct: 477 VDLSGIPESEHLS 489


>gi|322707504|gb|EFY99082.1| threonyl-tRNA synthetase [Metarhizium anisopliae ARSEF 23]
          Length = 563

 Score =  241 bits (616), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 146/450 (32%), Positives = 231/450 (51%), Gaps = 70/450 (15%)

Query: 233 QYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDY 291
           QY    E+ E  DHRK+  + +LF  +    G   +   G +IF  LI ++R++  +  +
Sbjct: 101 QYSQKPEKREPPDHRKIGLQQELFITSAYSPGSPIFLPNGARIFNRLIDFIRKQYARYGF 160

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKC-------------------ADDTIKDLR 332
           +E+ TP +  + LW +SGH ++Y  +M+ V                     A+  ++   
Sbjct: 161 QEVITPTIYKKALWAKSGHLENYADDMYTVTGNTSTPDKDGGGCCGGDHGPAEPDLEADN 220

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
            + LKPMNCPGH  +F   + SYRELPVR A+F  ++RNE SG+L GL RVR F QDD H
Sbjct: 221 EYGLKPMNCPGHCLIFASRVHSYRELPVRYADFSPLHRNEISGALSGLTRVRRFHQDDGH 280

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV----KLSTRPEKR-VGSDALWDDAENI 447
           +FC   Q+  E  K  + +  +Y   G  ++ V     LSTRP+   +G++  W+ AE+ 
Sbjct: 281 IFCRPSQVEEEIKKTLDFVKVVY---GVLRLGVGYRLALSTRPKDHFIGTEDEWNRAEDR 337

Query: 448 MKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFN 507
           +K  LD+  +  +  IN     G+GAFYGPK + ++KD+ G++ Q  TIQ+DF LP RF 
Sbjct: 338 LKMALDS--SGMEWSINE----GDGAFYGPKIDIVIKDSDGKEHQTATIQLDFQLPKRFA 391

Query: 508 AFYVNSHSE------------------KCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW 549
             Y     E                     PVMIHRAV GS+ER + ++IE++ G  P W
Sbjct: 392 LEYQAPAPEYEARGETTNDPVLLAEYGPVRPVMIHRAVLGSVERLMALLIESYDGKWPFW 451

Query: 550 LSPIQAIVTTITSS--AVEYAQEIANLL----------------KSHHLSIETDFRNETI 591
           L+P QAI+ T+ +S   +++A E+  +L                    L+++ D+   ++
Sbjct: 452 LNPRQAIILTVNTSRPVLDWADEVKEILLGLKKEAGQTSTEGPVNPTGLAVDVDYSARSL 511

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGI 621
             KIRE  I     I++ G+++     + +
Sbjct: 512 GSKIREARINGYSQILVVGEEDVKHGQVSL 541


>gi|207343684|gb|EDZ71074.1| YKL194Cp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 358

 Score =  241 bits (616), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 123/325 (37%), Positives = 194/325 (59%), Gaps = 20/325 (6%)

Query: 249 LAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR--RKIKDDYEEINTPQVLDQHLWQ 306
           +++  DLF       G +F+   G KIF  LI +M+  +K K  + E+ TP +  + LW+
Sbjct: 42  VSQRQDLFMTDPLSPGSMFFLPNGAKIFNKLIEFMKLQQKFKFGFNEVVTPLIYKKTLWE 101

Query: 307 QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFG 366
           +SGHW++Y  +MF V+  D+  ++   + LKPMNCPGH  +F    +SY ELP+R ++F 
Sbjct: 102 KSGHWENYADDMFKVETTDEEKEE---YGLKPMNCPGHCLIFGKKDRSYNELPLRFSDFS 158

Query: 367 SVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY-KDFGFEK--- 422
            ++RNE SG+L GL R+R F QDD H+FCT  Q+ +E      LI  +Y K F F K   
Sbjct: 159 PLHRNEASGALSGLTRLRKFHQDDGHIFCTPSQVKSEIFNSLKLIDIVYNKIFPFVKGGS 218

Query: 423 -----IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
                  +  STRP+  +G   +W+ AE ++K +L+  ++    ++N G    +GAFYGP
Sbjct: 219 GAESNYFINFSTRPDHFIGDLKVWNHAEQVLKEILE--ESGKPWKLNPG----DGAFYGP 272

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K + ++ D + +  Q  TIQ+DF LP RF+  + +  +    P+MIHRA FGSIERF+ +
Sbjct: 273 KLDIMVTDHLRKTHQVATIQLDFQLPERFDLKFKDQDNSYKRPIMIHRATFGSIERFMAL 332

Query: 538 MIENFKGNLPLWLSPIQAIVTTITS 562
           +I++ +G  P WL+P QA++  + +
Sbjct: 333 LIDSNEGRWPFWLNPYQAVIIPVNT 357


>gi|167520264|ref|XP_001744471.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163776802|gb|EDQ90420.1| predicted protein [Monosiga brevicollis MX1]
          Length = 473

 Score =  240 bits (613), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 147/453 (32%), Positives = 228/453 (50%), Gaps = 51/453 (11%)

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWR-----------GDSNRPM-LSRIYGTAWNTQQELT 232
           GPH+ ST       K    +   W+           G  +R   L R++  A+ TQ+E+ 
Sbjct: 1   GPHIGSTSHFAAL-KTTNQSSVAWKPSEPAYFTAPAGHEDREYKLQRVHAVAFPTQKEMK 59

Query: 233 QYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDY- 291
           QY   LE +++R H+ + +E  LF +     G  FW   G +IF+ L + +R  +  +Y 
Sbjct: 60  QYEARLEMAKQRTHQHIGQEQKLFFLDARSPGAPFWLPHGLRIFKRLEALVR-GVHSNYG 118

Query: 292 -EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH 350
            EE+ +P V  QHLW  SGHW+ Y  +M  ++  +D   +    ALKPMNCP H  +F+H
Sbjct: 119 FEEVKSPLVYKQHLWNTSGHWEHYSEDMTVLQHKED---EEVCQALKPMNCPAHCIMFSH 175

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
              SYRELP+R AE  +++RNE SG+L GL RVR F QDD H+FC  +Q+ +E  +    
Sbjct: 176 EPHSYRELPLRFAEHSALHRNEASGALSGLTRVRQFHQDDGHIFCRPDQVSSEVARCLEA 235

Query: 411 IISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL 469
           I  +Y   G     V LSTRPE   VGS  +W     +    +  I+             
Sbjct: 236 IGVVYARLGLTPTAV-LSTRPETGYVGSLEIWC---ALRSSFIIDIR------------- 278

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG 529
                        ++DA+GR  Q  TIQ+DFN+P RF   Y +       PV+IHRAV G
Sbjct: 279 -------------VRDAMGRTHQTATIQLDFNMPMRFELSYKDEDGAPQTPVLIHRAVLG 325

Query: 530 SIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE 589
           S ER + ++ E + G  PL LSP Q ++  ++     YA ++ + L+     ++ D    
Sbjct: 326 SFERMMALLTEQYWGRWPLHLSPRQLLILPVSEKHASYAWDVYHELQPFG-HVDVDDSPV 384

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           +++ +I +  + +   + + GD+E +  ++ IR
Sbjct: 385 SLSKRIAQQRVLRHNYVAVVGDEEVANDTLSIR 417


>gi|58699832|ref|ZP_00374451.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|58533650|gb|EAL58030.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
          Length = 236

 Score =  240 bits (613), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 112/235 (47%), Positives = 157/235 (66%), Gaps = 6/235 (2%)

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
           +L+  +Y + GF +I VK S RP+ R G D +WD AE   K +L+ +K +    ++  + 
Sbjct: 3   DLLKEVYSELGFNEISVKFSDRPDVRAGDDEVWDRAE---KALLEAVKEAG---LSYELS 56

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
            GEGAFYGPK E++LKDAIGR WQCGT+QVDF LP R  AFY+ +   K HPVM+HRA+ 
Sbjct: 57  PGEGAFYGPKLEFVLKDAIGRSWQCGTLQVDFILPERLGAFYIGADGHKHHPVMLHRAIL 116

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRN 588
           G+ ERFIGI+IEN+ G  P+WL+P Q  + TIT+ A  YA +I+N+LK   + ++TD  N
Sbjct: 117 GTFERFIGILIENYAGKFPVWLAPTQLAILTITNEADGYATKISNVLKEQGVRVKTDLTN 176

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           E I+YKIR HS+ K+PI+ I G  E + +++ +R  GS   +  SL  AI +L K
Sbjct: 177 EKISYKIRLHSLNKVPILWIVGKNEVTSKTVSVRNLGSERQESFSLEKAIELLLK 231


>gi|322696936|gb|EFY88721.1| putative threonine--tRNA ligase [Metarhizium acridum CQMa 102]
          Length = 491

 Score =  240 bits (612), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 145/450 (32%), Positives = 230/450 (51%), Gaps = 70/450 (15%)

Query: 233 QYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDY 291
           QY    E+ E  DHRK+  + +LF  +    G   +   G +IF  LI ++R++  +  +
Sbjct: 29  QYSQKPEKREPPDHRKIGLQQELFITSAYSPGSPIFLPNGARIFNRLIDFIRKQYARYGF 88

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVK-------------CADD------TIKDLR 332
           +E+ TP +  + LW +SGH ++Y  +M+ V              C  D        +   
Sbjct: 89  QEVITPTIYKKALWAKSGHLENYADDMYTVTGNASTPGKDTGGCCGSDHGPVEPDSEADN 148

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
            + LKPMNCPGH  +F   ++SYRELPVR A+F  ++RNE SG+L GL RVR F QDD H
Sbjct: 149 EYGLKPMNCPGHCLIFASKVRSYRELPVRYADFSPLHRNEVSGALSGLTRVRRFHQDDGH 208

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV----KLSTRPEKR-VGSDALWDDAENI 447
           +FC   Q+  E  K  + + ++Y   G  ++ V     LSTRP+   +G++  W+ AE+ 
Sbjct: 209 IFCRPSQVEEEIKKTLDFVKAVY---GVLRLGVGYRLALSTRPKDHFIGTEDEWNRAEDR 265

Query: 448 MKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFN 507
           +K  LD+  +  +  IN      +GAFYGPK + ++KD+ G++ Q  TIQ+DF LP RF 
Sbjct: 266 LKTALDS--SGMEWSINE----ADGAFYGPKIDIVIKDSDGKEHQTATIQLDFQLPKRFA 319

Query: 508 AFYVNSHSE------------------KCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW 549
             Y     E                     PVMIHRAV GS+ER + ++IE++ G  P W
Sbjct: 320 LEYQAPAPEYEARGETTNDPILLAEYGPVRPVMIHRAVLGSVERLMALLIESYDGKWPFW 379

Query: 550 LSPIQAIVTTITSS--AVEYAQEIANLL----------------KSHHLSIETDFRNETI 591
           L+P QAI+ T+ +S   +++A E+  +L                    L+++ D+   ++
Sbjct: 380 LNPRQAIILTVNTSRPVLDWADEVKEILLGLRKEAGQTSTEGPVNPTGLAVDVDYSARSL 439

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGI 621
             KIRE        I++ G+++     + +
Sbjct: 440 GSKIREARTNGYSQILVVGEEDVKHGQVSL 469


>gi|242774039|ref|XP_002478362.1| threonyl-tRNA synthetase [Talaromyces stipitatus ATCC 10500]
 gi|218721981|gb|EED21399.1| threonyl-tRNA synthetase [Talaromyces stipitatus ATCC 10500]
          Length = 532

 Score =  239 bits (611), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 145/416 (34%), Positives = 213/416 (51%), Gaps = 55/416 (13%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHR L    +LF  +    G   +   G  I   LI ++R + +   + E+ TP +  + 
Sbjct: 78  DHRVLGTAQELFTSSSYSPGSPLFLPNGTHIINKLIGFLRAQYRQYGFREVLTPNIYKKS 137

Query: 304 LWQQSGHWDSYRANMFAVKCADDT------IKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           LW+ SGHW +Y+ +M+ V+    T      + +   + LKPMNCPGH  +F     SYR+
Sbjct: 138 LWEISGHWQNYKDDMYEVRGRGATGETEGELGEDEQYGLKPMNCPGHCLLFKSQNHSYRD 197

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LPVR A+F  ++RNE SGSL GL RVR F QDD H+FC  +Q+  E       +  + K 
Sbjct: 198 LPVRYADFSPLHRNEISGSLSGLTRVRRFHQDDGHIFCRPQQIGKEIDLALAFVNMVMKT 257

Query: 418 FGFEKIMVKLSTRPEKR-VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           FG  K  + LSTRPEK  +GS  LWD+   +   + +                G+GAFYG
Sbjct: 258 FGLPKYTLVLSTRPEKDFIGSLELWDNKSGLPWELNE----------------GDGAFYG 301

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE---------KCHPVMIHRAV 527
           PK +  L+D+ G+  Q  TIQ+D NLP RF   Y  +  E         K  PV+IHRA+
Sbjct: 302 PKIDIQLQDSDGKYHQLSTIQLDLNLPQRFELEYQVAEGEPDYNPNTPGKATPVLIHRAI 361

Query: 528 FGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSS------AVEYAQEIAN-------- 573
           FGS+ERF+ I+IE + G  P WLSP Q I+ T+ +       A E A +I+         
Sbjct: 362 FGSLERFLAILIELYAGRWPFWLSPRQGIILTVQNDEPVLRLAEEAAAKISGYRSIDVEA 421

Query: 574 --LLKSHHLS------IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
             LL+   ++      I+ D  + +++ KI+     K  +I + G K  ++ SI +
Sbjct: 422 TELLQPAPIASDPTFLIDVDSSSRSLSKKIQRAKSMKYNLIFVVGSKNLADNSIDV 477


>gi|302499120|ref|XP_003011556.1| hypothetical protein ARB_02109 [Arthroderma benhamiae CBS 112371]
 gi|291175108|gb|EFE30916.1| hypothetical protein ARB_02109 [Arthroderma benhamiae CBS 112371]
          Length = 533

 Score =  239 bits (611), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 147/417 (35%), Positives = 216/417 (51%), Gaps = 47/417 (11%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK 322
           G   +   G  I   LI+++R + K   + E+ TP +  Q LW+ SGHW +Y+ +M+ V 
Sbjct: 86  GSPLFRPNGTHILNKLITFLRAQYKQYGFREVLTPNIYKQSLWEVSGHWQNYKDDMYEVG 145

Query: 323 CADDTIKDLRT-----FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
              DT +   T     + LKPMNCPGH  +F     SYRELPVR A+F  ++RNE SGSL
Sbjct: 146 GRGDTGEASETSENEIYGLKPMNCPGHCLLFKSQKHSYRELPVRYADFSPLHRNEVSGSL 205

Query: 378 HGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF-EKIMVKLSTRPEKR-V 435
            GL RVR F QDD H+FC   Q+ +E         ++ + FG  E   + LSTRPEK  +
Sbjct: 206 SGLTRVRRFHQDDGHIFCRPGQIGSEIQLALKFADTVLQTFGLAEGYRLVLSTRPEKDFI 265

Query: 436 GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGT 495
           GS   W++AE  ++  LD    S +  +N     G+GAFYGPK +  ++D+ G+  Q  T
Sbjct: 266 GSLEQWENAEQQLRQALDNSGLSWE--LNE----GDGAFYGPKIDLQIQDSQGKYHQLST 319

Query: 496 IQVDFNLPSRFNAFY-VNSHSE--------KCHPVMIHRAVFGSIERFIGIMIENFKGNL 546
           IQ+D NLP RF   Y V   SE        +  PV+IHRA+FGS+ERF  ++IE + G  
Sbjct: 320 IQLDMNLPQRFELEYLVPEGSEEYDPATGGRATPVLIHRAIFGSLERFFALLIERYNGQW 379

Query: 547 PLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH--------------------LSIETDF 586
           P WLSP QAI+ TI     + A++    +                         +++ D 
Sbjct: 380 PFWLSPRQAILLTIGKGIEQAAEDAVAKISGFEPITSSRPSSTGLPLSPLQPTFNVDLDL 439

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGI----RRFGSTTTQKVSLLDAIP 639
            + ++  KI +    +  ++ I G K  ++ S+ I    +  G +  +  +LLD IP
Sbjct: 440 ASRSLPKKIHDAHAARYNLVFIMGPKNVADGSVDIDLSGQVGGKSEDEIKALLDGIP 496


>gi|256274272|gb|EEU09179.1| Mst1p [Saccharomyces cerevisiae JAY291]
          Length = 429

 Score =  239 bits (611), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 129/393 (32%), Positives = 206/393 (52%), Gaps = 52/393 (13%)

Query: 249 LAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR--RKIKDDYEEINTPQVLDQHLWQ 306
           +++  DLF       G +F+   G KIF  LI +M+  +K K  + E+ TP +  + LW+
Sbjct: 42  VSQRQDLFMTDPLSPGSMFFLPNGAKIFNKLIEFMKLQQKFKFGFNEVVTPLIYKKTLWE 101

Query: 307 QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFG 366
           +SGHW++Y  +MF V+  D+  ++   + LKPMNCPGH  +F    +SY ELP+R ++F 
Sbjct: 102 KSGHWENYADDMFKVETTDEEKEE---YGLKPMNCPGHCLIFGKKDRSYNELPLRFSDFS 158

Query: 367 SVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK 426
            ++RNE SG+L GL R+R F QDD           N                        
Sbjct: 159 PLHRNEASGALSGLTRLRKFHQDDGRSGAESNYFIN------------------------ 194

Query: 427 LSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDA 486
            STRP+  +G   +W+ AE ++K +L+  ++    ++N G    +GAFYGPK + ++ D 
Sbjct: 195 FSTRPDHFIGDLKVWNHAEQVLKEILE--ESGKPWKLNPG----DGAFYGPKLDIMVTDH 248

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNL 546
           + +  Q  TIQ+DF LP RF+  + +  +    P+MIHRA FGSIERF+ ++I++ +G  
Sbjct: 249 LRKTHQVATIQLDFQLPERFDLKFKDQDNSYKRPIMIHRATFGSIERFMALLIDSNEGRW 308

Query: 547 PLWLSPIQAIVTTITSSAVEYAQEIANL-----------------LKSHHLSIETDFRNE 589
           P WL+P QA++  + +  V+       L                 L   H +++ D RNE
Sbjct: 309 PFWLNPYQAVIIPVNTKNVQQLDMCTALQKKLRNEREADDMEPVPLNDWHFNVDLDIRNE 368

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
            + Y+I+   +K    +II GD+E   +   IR
Sbjct: 369 PVGYRIKSAILKNYSYLIIVGDEEVQLQKYNIR 401


>gi|255732025|ref|XP_002550936.1| threonyl-tRNA synthetase [Candida tropicalis MYA-3404]
 gi|240131222|gb|EER30782.1| threonyl-tRNA synthetase [Candida tropicalis MYA-3404]
          Length = 1059

 Score =  239 bits (610), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 121/284 (42%), Positives = 165/284 (58%), Gaps = 6/284 (2%)

Query: 340  NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQ 399
            NCPGH  +F    +SYR+LP R+A+FG ++RNE SG+L GL RVR F QDDAH+FCT +Q
Sbjct: 744  NCPGHAVMFKSRERSYRDLPWRVADFGVIHRNEFSGALSGLTRVRRFQQDDAHIFCTADQ 803

Query: 400  MFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSS 459
            +  E   + +L+  +Y  FGFE  M +LSTRPEK VG    W+ AE  ++  LD      
Sbjct: 804  IGTEIAGVFDLLKKMYGIFGFEFKM-ELSTRPEKYVGDLETWNGAEQKLEQALDEFLGKG 862

Query: 460  QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
            +  +N G    +GAFYGPK + ++ DA+ R +QC TIQ+DF LP RF   Y         
Sbjct: 863  KWELNPG----DGAFYGPKIDIMISDALKRWFQCATIQLDFQLPHRFELEYKTDKGPTSR 918

Query: 520  PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH 579
            PVMIHRA+ GS+ER   I+ E++KG  P WLSP Q ++  +     +YAQ +   L   H
Sbjct: 919  PVMIHRAILGSVERMTAILTEHYKGKWPFWLSPRQILIVPVGPKYYDYAQTLQKRLNDEH 978

Query: 580  -LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
                + D    T+  KIR   + K   I I GD+E    S+ +R
Sbjct: 979  SFYCDVDVSGNTLPKKIRTGQMYKYNFIFIVGDEEEKSNSVNVR 1022



 Score =  214 bits (546), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 121/344 (35%), Positives = 194/344 (56%), Gaps = 17/344 (4%)

Query: 5   IKLTFPDGSIKNFPVHATGS-DVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           IK+T  DGSIK    + T   D+A SI +S A++ V   ++GK+ D+  P+  +  +E +
Sbjct: 67  IKVTLKDGSIKEGTAYETSPMDIASSIGKSFAERQVIAKVDGKLWDMPRPLEGDAKLEFL 126

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF---DKEQPFSSDEL 119
             E P   AV  HS AHI+ EA +  +    +  GP  +DGF+YD    + E   +  + 
Sbjct: 127 DFEHPEGKAVFWHSSAHILGEACECHYG-CHLTHGPPTDDGFFYDMSINNGETAVTQADF 185

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVE-ILESIPAKENVTLYRQGE 178
             +E+   + I     F +  L+ E+  E+F+  K  YK++ I + IP   + T+YR G 
Sbjct: 186 PSLEQVATKAIKEKQKFERLELTKEQLLEMFKYNK--YKIKFISDKIPDGTSTTVYRCGP 243

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLC GPH+  +G++K F K++K + +Y+ GDSN   L R+YG ++  ++ +T++L FL
Sbjct: 244 LIDLCVGPHIPQSGRIKAF-KVLKNSASYFLGDSNNDSLQRVYGISFPDKKLMTEHLKFL 302

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
            E+ +RDHRK+ +E +LF  +E   G   W   G +I+ TL+  +R +  K  Y+E+ TP
Sbjct: 303 AEAAERDHRKIGKEQELFFFSEMSPGSAMWLPHGTRIYNTLVETLREEYRKRGYDEVITP 362

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
            +    LW+ SGHW +Y+ NMF+ +   +      TF LKPMNC
Sbjct: 363 NMYSTKLWETSGHWQNYKENMFSFEVEKE------TFGLKPMNC 400


>gi|302653826|ref|XP_003018730.1| hypothetical protein TRV_07235 [Trichophyton verrucosum HKI 0517]
 gi|291182401|gb|EFE38085.1| hypothetical protein TRV_07235 [Trichophyton verrucosum HKI 0517]
          Length = 533

 Score =  238 bits (607), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 146/417 (35%), Positives = 216/417 (51%), Gaps = 47/417 (11%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK 322
           G   +   G  I   LI+++R + K   + E+ TP +  Q LW+ SGHW +Y+ +M+ V 
Sbjct: 86  GSPLFRPNGTHILNKLITFLRAQYKQYGFREVLTPNIYKQSLWEVSGHWQNYKDDMYEVG 145

Query: 323 CADDTIKDLRT-----FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
              DT +   T     + LKPMNCPGH  +F     SYRELPVR A+F  ++RNE SGSL
Sbjct: 146 GRGDTGETSDTSENEIYGLKPMNCPGHCLLFKSQKHSYRELPVRYADFSPLHRNEVSGSL 205

Query: 378 HGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF-EKIMVKLSTRPEKR-V 435
            GL RVR F QDD H+FC   Q+ +E         ++ + FG  +   + LSTRPEK  +
Sbjct: 206 SGLTRVRRFHQDDGHIFCRPGQIGSEIQLALKFADTVLQTFGLADGYRLVLSTRPEKDFI 265

Query: 436 GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGT 495
           GS   W++AE  ++  LD    S +  +N     G+GAFYGPK +  ++D+ G+  Q  T
Sbjct: 266 GSLEQWENAEQQLRQALDNSGLSWE--LNE----GDGAFYGPKIDLQIQDSQGKYHQLST 319

Query: 496 IQVDFNLPSRFNAFY-VNSHSE--------KCHPVMIHRAVFGSIERFIGIMIENFKGNL 546
           IQ+D NLP RF   Y V   SE        +  PV+IHRA+FGS+ERF  ++IE + G  
Sbjct: 320 IQLDMNLPQRFELEYLVPEGSEEYDPATGGRATPVLIHRAIFGSLERFFALLIERYNGQW 379

Query: 547 PLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH--------------------LSIETDF 586
           P WLSP QAI+ TI     + A++    +                         +++ D 
Sbjct: 380 PFWLSPRQAILLTIGKGLEQAAEDAVAKISGFEPITSSRPSSTGLPLSPLQPTFNVDLDL 439

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGI----RRFGSTTTQKVSLLDAIP 639
            + ++  KI +    +  ++ I G K  ++ S+ I    +  G +  +  +LLD IP
Sbjct: 440 ASRSLPKKIHDAHAARYNLVFIMGPKNVADGSVDIDLSGQVGGKSEDEIKALLDGIP 496


>gi|255030614|ref|ZP_05302565.1| threonyl-tRNA synthetase [Listeria monocytogenes LO28]
          Length = 303

 Score =  236 bits (602), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 115/293 (39%), Positives = 178/293 (60%), Gaps = 11/293 (3%)

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           ++ + + SYRELP+R+AE G ++R E SG+L GL RVRG T +DAHVF   +Q+ +E  +
Sbjct: 3   IYKNDIHSYRELPIRIAELGMMHRYEMSGALSGLQRVRGMTLNDAHVFVRPDQIKDEFKR 62

Query: 407 IHNLIISIYKDFGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
           +  LI+ +YKDF       +LS R     EK    DA+W+ A+ ++K  +D ++      
Sbjct: 63  VVELILEVYKDFDITDYSFRLSYRDPKNTEKYFDDDAMWEKAQAMLKSAMDEME------ 116

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
           ++     GE AFYGPK +  +K AIG++    T+Q+DF LP RF+  Y+    EK  PV+
Sbjct: 117 MDYFEAEGEAAFYGPKLDVQVKTAIGKEETLSTVQLDFLLPERFDLTYIGEDGEKHRPVV 176

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLS 581
           IHR V  ++ERF+  +IE +KG  P WL+P+Q  +  + + A ++YA+ + + L+   L 
Sbjct: 177 IHRGVVSTMERFVAYLIEEYKGAFPTWLAPVQMEIIPVNADAHLDYAKGVQDKLQRAGLR 236

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
            E D RNE + YKIRE   KKIP  ++ GD+E    S+ +RR+GS  ++ + L
Sbjct: 237 AEVDDRNEKLGYKIREAQTKKIPYALVLGDQEVEAGSVNVRRYGSKDSETMDL 289


>gi|296422769|ref|XP_002840931.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295637158|emb|CAZ85122.1| unnamed protein product [Tuber melanosporum]
          Length = 459

 Score =  236 bits (602), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 147/389 (37%), Positives = 204/389 (52%), Gaps = 37/389 (9%)

Query: 245 DHRKLAREMDLF--HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD 301
           DHR LA   DL   H    GS +   H  G +IF  LIS++R +     YEE+ TP +  
Sbjct: 56  DHRLLAAAQDLLITHPVSPGSPLFLPH--GSRIFNKLISFIRSQYTLYGYEEVITPTIYK 113

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH--GLKSYRELP 359
           + LW+ SGHW++Y  +MF V+  ++       F LKPMNCPGH  +F H  G  S R+LP
Sbjct: 114 KSLWETSGHWENYNEHMFKVEAGEE-------FGLKPMNCPGHCLLFKHAAGKLSLRDLP 166

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           VR A+F  ++RNE SGSL GL RVR F QDDAH+FC   Q+  E       I ++YK F 
Sbjct: 167 VRYADFSPLHRNENSGSLSGLTRVRRFHQDDAHIFCRPSQISQEISSTLRFIQTVYKVFH 226

Query: 420 FEKIMVKLSTRP-EKRVGSDALWDDAENIMKGVLDTIKNSSQD-RINTGVLLGEGAFYGP 477
                ++LSTRP E  +GS   WD AE  +K  LD    S QD  IN     G+GAFYGP
Sbjct: 227 LPPYKLRLSTRPKEGYMGSLEEWDRAEAALKASLD---KSGQDWAINE----GDGAFYGP 279

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI-- 535
           K + IL D+ G++ Q  TIQ+DF LP R    Y         P    + +  +    +  
Sbjct: 280 KIDTILTDSDGKEHQTATIQLDFQLPRRLGLNYFAP-----APAAEQKGILSTDPEQLKE 334

Query: 536 -GIMIENFKGNLPLWLSPIQAIV--TTITSSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
            G +  ++ G  P WLSP QAIV    +T   V YA+ ++        +++ D     ++
Sbjct: 335 SGFVTPHYNGKWPFWLSPRQAIVIPVAMTDEIVAYARAMSR----RTFNVDIDESGGLLS 390

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGI 621
            K+R   IK    II+ G+K    +++ +
Sbjct: 391 RKVRAARIKHYNYIIVVGEKNLQAKTVSL 419


>gi|309808038|ref|ZP_07701957.1| putative threonine--tRNA ligase [Lactobacillus iners LactinV
           01V1-a]
 gi|308168721|gb|EFO70820.1| putative threonine--tRNA ligase [Lactobacillus iners LactinV
           01V1-a]
          Length = 377

 Score =  236 bits (601), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 130/369 (35%), Positives = 216/369 (58%), Gaps = 12/369 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS K F    T  ++A SI+ SLAK AVA  +N ++  L   V  +  + IIT +
Sbjct: 5   ITLPDGSKKEFNHALTIKEIASSIATSLAKSAVAGKVNDEIRPLDFVVDTDARVAIITDK 64

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L V+R++ A +        +P V++    + EDGF+ D DKE    + EL  +EK+
Sbjct: 65  DEEGLQVLRNTAAFVFEMVASKQYPSVRLGTSELEEDGFFVDTDKEDQIKASELPDLEKE 124

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           MQ+I+        + +S  +  +LF  K + YK+E+L+     + V +Y+  ++ D    
Sbjct: 125 MQKIVKNGEKIEYKIVSKSELLDLF--KDDPYKLELLKE--EADEVAVYKLEDFVDFGFN 180

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
             + +TG++K F KL+ VAGAYW+G S+ PML RI+GTA+  + +L   L   E+ ++RD
Sbjct: 181 ALLMNTGKLKHF-KLLSVAGAYWQGKSSNPMLQRIFGTAFFKEADLKADLQRREDIKERD 239

Query: 246 HRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQVLDQH 303
           HR + R++DLF +  + G+G+ +W  KG  I + +  Y + +++ D Y+ + TP +++  
Sbjct: 240 HRTIGRDLDLFFVDPKVGAGLPYWMPKGATIRRVIERYIIDKEVADGYQHVYTPVLMNLD 299

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
            ++ SGHW  YR +MF        + D     L+PMNCP H+ ++NH ++SYRELP+R+A
Sbjct: 300 AYKTSGHWAHYREDMFPPM----DMGDGEMLELRPMNCPSHIQIYNHHIRSYRELPIRIA 355

Query: 364 EFGSVYRNE 372
           E G ++R++
Sbjct: 356 ELGMMHRSK 364


>gi|154295615|ref|XP_001548242.1| hypothetical protein BC1G_13078 [Botryotinia fuckeliana B05.10]
 gi|150843958|gb|EDN19151.1| hypothetical protein BC1G_13078 [Botryotinia fuckeliana B05.10]
          Length = 442

 Score =  235 bits (599), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 135/389 (34%), Positives = 203/389 (52%), Gaps = 48/389 (12%)

Query: 275 IFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAV---KCADDTIKD 330
           +F+ L  ++  +     +EE+ TP +  + LW++SGHW++Y  +M++V     + +TI  
Sbjct: 1   MFKALTEFLSAQYSHFGFEEVITPTIYKKSLWEKSGHWENYAEDMYSVVGRGASGETIGG 60

Query: 331 LR----TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
            +     + LKPMNCPGH  +F    +SYRE+PVR  +F  ++RNE SG+L GL RVR F
Sbjct: 61  QKGENEEYGLKPMNCPGHCLIFASKQRSYREMPVRYTDFSPLHRNEISGALSGLTRVRRF 120

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP-EKRVGSDALWDDAE 445
            QDD H+FC   Q+  E       +  +Y   G     + LSTRP +  +G+   WD+AE
Sbjct: 121 HQDDGHIFCRPSQIGKEISGTLEFVRMVYTTLGLGPYRLALSTRPSDHYIGTKEEWDNAE 180

Query: 446 NIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSR 505
             +K  LD  K+     +N     G+GAFYGPK + ILKD+ G++ Q  TIQ+DF LP R
Sbjct: 181 TALKQSLD--KSGQPWTMNE----GDGAFYGPKIDVILKDSDGKEHQTATIQLDFQLPKR 234

Query: 506 FNAFYVNSHSE------------------KCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           F   Y     E                     PV+IHRA+ GS+ER + ++IE++ G+ P
Sbjct: 235 FELEYQAPAPEIEAKGETTDDPILLAKQGPVAPVLIHRAILGSVERMMALLIEHYNGHWP 294

Query: 548 LWLSPIQAIVTTITSS--AVEYAQEIANLL----------KSHH---LSIETDFRNETIN 592
            WL+P + I+ T+  S   V YA  +   L          KS H   + IE D    ++ 
Sbjct: 295 FWLNPSKVIILTVNDSEEVVSYANRVKMQLGQGAYHDSWPKSRHSIEVPIELDDSPRSVK 354

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGI 621
            KI E   K+   II+ G+K     ++ +
Sbjct: 355 KKISEAKRKRFGAIIVIGNKNVENNTVTV 383


>gi|224023751|ref|ZP_03642117.1| hypothetical protein BACCOPRO_00467 [Bacteroides coprophilus DSM
           18228]
 gi|224016973|gb|EEF74985.1| hypothetical protein BACCOPRO_00467 [Bacteroides coprophilus DSM
           18228]
          Length = 285

 Score =  235 bits (599), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 117/275 (42%), Positives = 168/275 (61%), Gaps = 10/275 (3%)

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
           G+V R E SG LHGL RVR FTQDDAH+FC  +Q+ +E L++ ++I  ++K   FE    
Sbjct: 1   GTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKDEFLRVMDIISIVFKSMNFENFEA 60

Query: 426 KLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
           ++S R     EK +GSD  W+ AE  +      I+   +  +   V  GE AFYGPK ++
Sbjct: 61  QISLRDKVNREKYIGSDENWEKAEQAI------IEACEEKGLPAKVEYGEAAFYGPKLDF 114

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
           ++KDAIGR WQ GTIQVD+NLP RF   Y+ S ++K  PVMIHRA FGS+ERF+ ++IE+
Sbjct: 115 MVKDAIGRRWQLGTIQVDYNLPERFQLEYMGSDNQKHRPVMIHRAPFGSMERFVAVLIEH 174

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G  PLWL+P Q  +  ++    EYA  +   LK + +    D RNE I  KIR++ +K
Sbjct: 175 TAGKFPLWLTPDQVAILPVSEKYNEYADHVRLELKKNDIRAIVDDRNEKIGRKIRDNEMK 234

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
           +IP ++I G+KEA    + +R+ G      + + D
Sbjct: 235 RIPYMLIVGEKEAENEEVSVRKQGEGDQGTMKIED 269


>gi|302865324|ref|YP_003833961.1| threonyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029]
 gi|302568183|gb|ADL44385.1| threonyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029]
          Length = 404

 Score =  234 bits (598), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 131/385 (34%), Positives = 211/385 (54%), Gaps = 23/385 (5%)

Query: 245 DHRKLAREMDLFHIAED--GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           DHR+L R+++LF +++   G+G+  W   G      +  Y+R  + +  Y+ + +P +  
Sbjct: 3   DHRRLGRDLELF-VSDPLAGAGLPIWLPAGAAARHAVEEYVRELERRAGYQHVYSPPLGK 61

Query: 302 QHLWQQSGHWDSYRANMFAVK--CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           + L++ SGH   +  +MF      ADD       F L+P  CP H  VF    +SYRELP
Sbjct: 62  RELFELSGHLGYFADDMFPPMRLSADDE------FVLRPALCPHHALVFRARGRSYRELP 115

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G +YR E SG L GL RVR  + +DAH FC  EQ+ +E  +I  LI   +   G
Sbjct: 116 LRVAELGGMYRAERSGVLGGLSRVRAISLNDAHNFCALEQVGDEVREILRLIGEAHAALG 175

Query: 420 FEKIMVKLSTR-PEKR-VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
                ++LS R P++R VG DA W  AE +++  LD +              GE AFYGP
Sbjct: 176 VRPAGLRLSLRGPDQRYVGDDAGWARAEELLRAALDGVDVVEAP--------GEAAFYGP 227

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  + DA GR+    T+Q+DF+ P RF+  Y +S   +  PVM+HR++ GS+ER    
Sbjct: 228 KIDIQIVDAAGRESTISTVQLDFDKPERFDLSYTDSDGRRKRPVMVHRSLVGSMERLFAY 287

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE  +G  P W +P+Q ++  + ++ V+ A  +A   ++  L  E D    ++  +IR+
Sbjct: 288 LIEVHEGAFPAWYAPVQLLLLPVDAAQVDAAVGLARRAEAAGLRAEVDHAG-SLGARIRD 346

Query: 598 HSIKKIPIIIICGDKEASERSIGIR 622
            S +++P   + G +EA++ S+ +R
Sbjct: 347 ASRRRVPYTGVLGPREAADGSVSLR 371


>gi|302552824|ref|ZP_07305166.1| threonyl-tRNA synthetase [Streptomyces viridochromogenes DSM 40736]
 gi|302470442|gb|EFL33535.1| threonyl-tRNA synthetase [Streptomyces viridochromogenes DSM 40736]
          Length = 416

 Score =  234 bits (597), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 132/384 (34%), Positives = 198/384 (51%), Gaps = 20/384 (5%)

Query: 245 DHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           DHR+L RE+DLF      G+G+ +W   G  +  TL  Y+R  + +  Y  + +P +  +
Sbjct: 13  DHRRLGRELDLFDTDPLMGAGLPYWLPDGAIVRHTLEEYVREAERRAGYRHVYSPVLGKR 72

Query: 303 HLWQQSGHWDSYRANMFA-VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
            L++ SGHWD Y  +MF  ++   + +       L+P  CP H  ++     SYRELP+R
Sbjct: 73  ELYEISGHWDHYSEDMFPPMELGAEQV------LLRPSLCPHHALIYRSRSHSYRELPLR 126

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AE G +YR+E SG L GL RVR  T +DAH+FCT EQ   E      LI   Y D G  
Sbjct: 127 MAELGGMYRSELSGVLGGLTRVRAITLNDAHIFCTLEQAVEEARSALELIGRAYADLGIR 186

Query: 422 KIMVKLSTRPE--KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
               +LS   E  K V    LW  A  +++ VLD         I      GE AFYGPK 
Sbjct: 187 PARYRLSLPGEGGKYVADPELWRRATALLREVLDG------SGIRYEAAEGEAAFYGPKI 240

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +  + D  GR+    T+Q+DF+ P RF+  Y+     K  PVM+HR++ GS+ER +  ++
Sbjct: 241 DVQITDPAGREATLSTVQIDFHQPERFDLHYIGPDGAKHRPVMVHRSIIGSVERAVAHLV 300

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIE-TDFRNETINYKIREH 598
           E+  G  P WL+P+Q  +  +     E+A E+A   +   L  E  D    T+  +IR  
Sbjct: 301 ESHGGAFPPWLAPVQLAILPVADEQAEHAHELARRARDLGLRAEVADPAEGTLAARIR-- 358

Query: 599 SIKKIPIIIICGDKEASERSIGIR 622
           + + +P   + G +EA+   + +R
Sbjct: 359 AARLVPYQAVIGAREAAAGLVAVR 382


>gi|159036441|ref|YP_001535694.1| threonyl-tRNA synthetase [Salinispora arenicola CNS-205]
 gi|157915276|gb|ABV96703.1| threonyl-tRNA synthetase [Salinispora arenicola CNS-205]
          Length = 405

 Score =  233 bits (594), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 133/405 (32%), Positives = 213/405 (52%), Gaps = 21/405 (5%)

Query: 245 DHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           DHR+L RE+ LF      G+G+  W   G      +  Y+R  + +  ++ + TP +  +
Sbjct: 3   DHRRLGRELGLFTSDPLAGAGLPLWLPAGAAARHAVEEYIRELERQAGHQHVLTPPLGKR 62

Query: 303 HLWQQSGHWDSYRANMFAVK--CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            L++ SGH D +  +MF      ADD       F L+P  CP H  V+    +S R+LP+
Sbjct: 63  ELFELSGHLDFFADDMFPPMRLSADDE------FVLRPALCPHHALVYRSRGRSRRDLPL 116

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G +YR E SG L GL RVR  + +DAH FCT +Q+  E  +I  LI   +   G 
Sbjct: 117 RIAELGGMYRAERSGVLGGLARVRAISLNDAHNFCTLDQVGAEVAEILRLIREAHAALGV 176

Query: 421 EKIMVKLSTRP--EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
                +LS R   E+ VG +A W+ AE +++  LD ++ +          +GE AFYGPK
Sbjct: 177 RPAGYRLSLRGPGERYVGDEADWERAEELLRAALDGVEYTEG--------VGEAAFYGPK 228

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +  + D+ GR+    T+Q+DF+ P RF+  YV+S   +  PVM+HR++ GS+ER  G +
Sbjct: 229 IDIQVVDSAGRESTLSTVQLDFDKPERFDLSYVDSGGARRRPVMVHRSLVGSMERLFGYL 288

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE  +G  P W +P+Q +V  I +     A+  A   ++  L  E   RN ++  +IRE 
Sbjct: 289 IEVHEGTFPAWYAPVQLVVLPIAAGQDSAAETFAAAGQAAGLRAEV-HRNGSLGGRIREA 347

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  +IP   + G +EA+   + +R     +   +   +AI ++ +
Sbjct: 348 ARARIPYAAVVGPREAAVGQVSLRLRDGRSLAPLPAAEAIALVAR 392


>gi|213582472|ref|ZP_03364298.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
          Length = 238

 Score =  231 bits (590), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 107/231 (46%), Positives = 150/231 (64%), Gaps = 6/231 (2%)

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           +Y  FGFEKI+VKLSTRP+KR+GSD +WD AE  +   L+      ++ I     LGEGA
Sbjct: 3   MYSTFGFEKIVVKLSTRPDKRIGSDEMWDRAEADLAVALE------ENNIPFEYQLGEGA 56

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK E+ L D + R WQCGT+Q+DF+LPSR +A YV   +E+  PVMIHRA+ GS+ER
Sbjct: 57  FYGPKIEFTLYDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMER 116

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           FIGI+ E F G  P WL+P+Q +V  IT S  EY  E+   L++  + ++ D RNE I +
Sbjct: 117 FIGILTEEFAGFFPTWLAPVQVVVMNITDSQSEYVNELTQKLQNAGIRVKADLRNEKIGF 176

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIREH+++++P +++CGDKE     + +R         + + D I  L +E
Sbjct: 177 KIREHTLRRVPYMLVCGDKEVEAGKVAVRTRRGKDLGSLDVNDVIEKLQQE 227


>gi|207724051|ref|YP_002254449.1| threonyl-trna synthetase protein [Ralstonia solanacearum MolK2]
 gi|206589260|emb|CAQ36222.1| threonyl-trna synthetase protein [Ralstonia solanacearum MolK2]
          Length = 243

 Score =  230 bits (587), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 105/225 (46%), Positives = 143/225 (63%), Gaps = 6/225 (2%)

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
           E    ++L  S+Y+DFGFE + VKL+ RP+KR G+D +WD AE  ++  L       ++ 
Sbjct: 3   EAKDFNDLAFSVYEDFGFENVAVKLALRPDKRAGTDEIWDHAEEGLRTALRACGVEWEE- 61

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
                L GEGAFYGPK EY +KDAIGR WQCGT+Q+D  LP R  A YV   + +  PVM
Sbjct: 62  -----LPGEGAFYGPKVEYHIKDAIGRSWQCGTLQLDLVLPERLGAEYVAEDNSRKRPVM 116

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSI 582
           +HRA+ GS ERF+GI++EN  G LPLWL+P Q +V +I  +  EYAQ +A  L+      
Sbjct: 117 LHRAILGSFERFLGILLENHAGALPLWLAPEQVVVMSIADAHAEYAQTVAQSLQKQGFRA 176

Query: 583 ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGST 627
             D RNE I YKIREHS++K+P +++ GDKE     + +R  G+ 
Sbjct: 177 SADLRNEKITYKIREHSLQKVPYLVVVGDKERDGNQVAVRARGNV 221


>gi|284031321|ref|YP_003381252.1| threonyl-tRNA synthetase [Kribbella flavida DSM 17836]
 gi|283810614|gb|ADB32453.1| threonyl-tRNA synthetase [Kribbella flavida DSM 17836]
          Length = 417

 Score =  230 bits (586), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 139/398 (34%), Positives = 205/398 (51%), Gaps = 32/398 (8%)

Query: 245 DHRKLAREMDLFHIAED---GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           DHRKL RE+ LF    D   G+G+ +    G  I Q L SY+   + +  Y+ + +P + 
Sbjct: 3   DHRKLGRELGLFD--SDPLIGAGLPYLLPAGAAIRQALESYVAELERRSGYQHVYSPVLG 60

Query: 301 DQHLWQQSGHWDSYRANMFA-VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            + L++ SGHW  Y  +M+  +K  ++ +       L+P  CP H  ++     SYRELP
Sbjct: 61  KRELYELSGHWSHYSDDMYPPMKVGEEEV------VLRPSLCPHHALIYRSRAHSYRELP 114

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           VR AE G +YR+E SG L GL RVR    +D H+FCT +Q+ +E     +LI+  Y D G
Sbjct: 115 VRYAELGGMYRSELSGVLGGLTRVRAIQLNDGHIFCTLDQVADEARAALDLILRAYGDLG 174

Query: 420 FEKIMVKLSTRP---------EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
                  LS             K VG    WD +  +++ VLD      ++        G
Sbjct: 175 LRPARFLLSLPAADARIGDPASKYVGDAESWDRSAALLREVLDEAGVQYEEAP------G 228

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           E AFYGPK +  + DA GR+    TIQ+DF+ P+RF   Y+ +   K  PVM+HRA+ GS
Sbjct: 229 EAAFYGPKIDVQIADAAGRESTLSTIQIDFHQPARFELDYIGADGNKHRPVMVHRAIIGS 288

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE- 589
           +ER I  +IE   G LP WL+P+Q +V  I+ +  +YA EI        L  E    +E 
Sbjct: 289 LERVIAQLIELHGGALPGWLAPVQLVVLPISDAEEKYAAEITRRAVDRGLRAELAHADEG 348

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIR-RFGS 626
           T+  +IRE+ +  +P   + G +E     + +R R GS
Sbjct: 349 TLGARIRENRL--VPYQAVIGARELEAGQLAVRDRSGS 384


>gi|320586315|gb|EFW98994.1| threonyl-tRNA synthetase [Grosmannia clavigera kw1407]
          Length = 524

 Score =  230 bits (586), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 133/418 (31%), Positives = 213/418 (50%), Gaps = 47/418 (11%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQH 303
           DHR L  + +LF  +    G   +   G ++F  L+ ++R++ ++  ++E+ TP +  + 
Sbjct: 76  DHRDLGVQQELFTTSIYSPGSPIFLPNGARVFNRLVDFLRKQYVRYGFQEVITPTIYKKA 135

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRT--------------FALKPMNCPGHVAVFN 349
           LW +SGH ++Y  +MF V  A     + R               + LKPMNCPGH  +F 
Sbjct: 136 LWAKSGHLENYADDMFTVTSASLATGERRGEGGATPGPQDLEDEYGLKPMNCPGHCLIFA 195

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
               SYR+LP+R A+F  ++R+E SG+L GL RVR F QDD HVFC  +Q+  E     +
Sbjct: 196 AQRHSYRDLPIRYADFSPLHRDELSGALSGLTRVRRFHQDDGHVFCRPDQVEAEIRATLD 255

Query: 410 LIISIYKDFGFEKIMVKLSTRP--EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGV 467
            +   Y   G     + LSTRP     +G+   WD AE+ ++  LD   ++        V
Sbjct: 256 FVRHTYDVLGLGPYRLVLSTRPLDGHLIGTADDWDAAEDALRRALDHSHSAWT------V 309

Query: 468 LLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFY------VNSHSEKCHPV 521
             G+GAFYGPK + +L+D+ G++ Q  T+Q+DF LP RF   Y        +  E   PV
Sbjct: 310 SPGDGAFYGPKIDVVLRDSDGKEHQTATVQLDFQLPKRFALTYQEAVPKTKAEVEAARPV 369

Query: 522 MIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSS--AVEYAQEIANLLKSHH 579
           +IHRAV GS+ER + ++IE++ G  P WL+P Q  V T+  S   V +A+ +  +L    
Sbjct: 370 LIHRAVLGSVERLMALLIEHYDGRWPFWLNPRQVAVLTVNDSEPVVAFARHVQAVLNGTA 429

Query: 580 ----------------LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
                            +++ D    T+  K+RE   K    +++ G K+ +  ++ +
Sbjct: 430 ETQDVPLGSLSAPTLLAAVDLDDSARTLPLKVREARSKGYGAVVVVGPKDVARGTVAV 487


>gi|330888316|gb|EGH20977.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. mori str.
           301020]
          Length = 250

 Score =  229 bits (584), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 106/242 (43%), Positives = 156/242 (64%), Gaps = 12/242 (4%)

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNS 458
           +M  E      L + +Y DFGF+ I +KLSTRPEKRVGSD LWD AE  +   LD+    
Sbjct: 1   KMKAESAAFIKLTLDVYADFGFKDIELKLSTRPEKRVGSDELWDRAETALASALDSAG-- 58

Query: 459 SQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC 518
               +   +  GEGAFYGPK E+ LKD +GR WQCGT+Q+DFNLP R +A YV+  + + 
Sbjct: 59  ----LPYDLQPGEGAFYGPKIEFSLKDCLGRVWQCGTLQLDFNLPIRLSAEYVSEDNSRK 114

Query: 519 HPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSH 578
           +PVM+HRA+ GS ERFIGI+IE+++G  P WL+P QA++  IT    ++A E+   L   
Sbjct: 115 NPVMLHRAILGSFERFIGILIEHYEGAFPAWLAPTQAVIMNITDKQADFALEVEKTLAES 174

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
               ++D RNE I +KIREH++ K+P +++ GD+E   +++ +R      T++ + L ++
Sbjct: 175 GFRAKSDLRNEKIGFKIREHTLLKVPYLLVIGDREVEMQTVAVR------TREGADLGSM 228

Query: 639 PI 640
           P+
Sbjct: 229 PV 230


>gi|315501868|ref|YP_004080755.1| tRNA synthetase class ii (g h p and s) [Micromonospora sp. L5]
 gi|315408487|gb|ADU06604.1| tRNA synthetase class II (G H P and S) [Micromonospora sp. L5]
          Length = 404

 Score =  229 bits (583), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 130/385 (33%), Positives = 211/385 (54%), Gaps = 23/385 (5%)

Query: 245 DHRKLAREMDLFHIAED--GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           DHR+L R+++LF +++   G+G+  W   G      +  Y+R  + +  Y+ + +P +  
Sbjct: 3   DHRRLGRDLELF-VSDPLAGAGLPIWLPAGAAARHAVEEYVRELERRAGYQHVYSPPLGK 61

Query: 302 QHLWQQSGHWDSYRANMFAVK--CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           + L+++SGH   +  +MF      ADD       F L+P  CP H  VF    +SYRELP
Sbjct: 62  RELFERSGHLGYFADDMFPPMRLSADDE------FVLRPALCPHHALVFRARGRSYRELP 115

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G +YR E SG L GL RVR  + +DAH FC  EQ+ +E  +I  LI   +   G
Sbjct: 116 LRVAELGGMYRAERSGVLGGLSRVRAISLNDAHNFCALEQVGDEVREILRLIGEAHAALG 175

Query: 420 FEKIMVKLSTR-PEKR-VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
                ++LS R P++R VG DA W  AE +++  LD +              GE AFYGP
Sbjct: 176 VRPAGLRLSLRGPDQRYVGDDAGWARAEELLRAALDGVDVVEAP--------GEAAFYGP 227

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  + DA GR+    T+Q+DF+ P RF+  Y +S   +  PVM+HR++ GS+ER    
Sbjct: 228 KIDIQIVDAAGRESTISTVQLDFDKPERFDLSYTDSDGRRKRPVMVHRSLVGSMERLFAY 287

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE  +G  P W +P+Q ++  + ++  + A  +A   ++  L  E D    ++  +IR+
Sbjct: 288 LIEVHEGAFPAWYAPVQLLLLPVDAAQADAAVGLARRAEAAGLRAEVDHAG-SLGARIRD 346

Query: 598 HSIKKIPIIIICGDKEASERSIGIR 622
            S +++P   + G +EA++ S+ +R
Sbjct: 347 ASRRRVPYTGVLGPREAADGSVSLR 371


>gi|42523294|ref|NP_968674.1| hypothetical protein Bd1807 [Bdellovibrio bacteriovorus HD100]
 gi|39575499|emb|CAE79667.1| thrS [Bdellovibrio bacteriovorus HD100]
          Length = 416

 Score =  228 bits (580), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 136/413 (32%), Positives = 215/413 (52%), Gaps = 27/413 (6%)

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           ++DHR+L + +  FH  E  G+G+  W   G  I   L    R  +    Y+ + +P + 
Sbjct: 15  QKDHRELNQYLSYFHSDESIGAGLPLWLPAGVVIRDELEKLARELEFLAGYQRVVSPHLA 74

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            + L+ QSGH   Y  +M+     ++       + L+PM CP H  +F+  L SYRELP+
Sbjct: 75  KEDLYHQSGHLPYYEDSMYPSMDLENV-----RYRLRPMCCPHHHKIFSAKLHSYRELPL 129

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLAE+G VYR E SG+L GLMRVRG  Q+DAH++  + Q+  E  K+  +    Y+  G 
Sbjct: 130 RLAEYGQVYRYEGSGALSGLMRVRGLCQNDAHLYVRQNQVKVEIHKVLEMYQKAYRILGI 189

Query: 421 EKIMVKLSTRPEKRVGS-----DALWDDAENIMKGVLDTIKNSSQDRINTGVLL----GE 471
               ++LS   E    S     + LWD AE I++ VL          + +G+      GE
Sbjct: 190 SDYRLRLSRGVEAEEASQKYVANPLWDWAEGILREVL----------VESGLPFFEAPGE 239

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
            AFYGPK +  +    G++    T+QVDF    RF+  ++N    K  PV++HRA  GS 
Sbjct: 240 AAFYGPKIDVQIMSVHGKEESASTVQVDFISAERFDLSFINEEGHKERPVILHRAPLGSH 299

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           ER + ++IE ++G  PLWLSP Q  +  +     E A+ +  LL +  + +  D R E++
Sbjct: 300 ERMVALLIELYQGAFPLWLSPEQVRIVPLADRHQEAAEGLRLLLHNSFIRVRVDDRAESL 359

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           + K+ E   +K+  +++ GDKE       ++R G+ + Q VS  + + +L  E
Sbjct: 360 SRKMAECWQEKVHSVVVIGDKELQAGKFSLQRRGA-SAQSVSAQELLSLLQNE 411


>gi|89100404|ref|ZP_01173268.1| threonyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
 gi|89084923|gb|EAR64060.1| threonyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
          Length = 234

 Score =  227 bits (579), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 112/235 (47%), Positives = 162/235 (68%), Gaps = 2/235 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSI 59
           M   IKLTFPDG++K FP   +  DVA SIS  L KKA+A  +NG + DL  P+ E GSI
Sbjct: 1   MSELIKLTFPDGAVKEFPKGTSTEDVAASISPGLKKKALAGKLNGIMYDLRRPIEEDGSI 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EI+T     +L V+RHS AH+MA+A++ +    +  +GP+IE GFYYD D E+  + ++L
Sbjct: 61  EIVTQGSDEALEVLRHSTAHLMAQAIKRLHKGAKFGVGPVIEGGFYYDVDLEESLTPEDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEK+M +I+  +    ++ +S E+A E F+   + YK+E++E+IP  E VTLY QG++
Sbjct: 121 PLIEKEMAKIVNENIDVHRKAVSREEAVEFFKEIGDEYKLELIEAIPEGETVTLYEQGDF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
            DLCRG HV STG++K+ FKL+ +AGAYWRGDS+  ML RIYGTA+  +++L ++
Sbjct: 181 TDLCRGVHVPSTGKIKE-FKLLSIAGAYWRGDSDNKMLQRIYGTAFFKKEDLAEH 234


>gi|76664827|emb|CAJ17850.1| threonyl-tRNA synthetase [Candidatus Phytoplasma solani]
          Length = 302

 Score =  227 bits (579), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 115/310 (37%), Positives = 199/310 (64%), Gaps = 11/310 (3%)

Query: 77  CAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQIEKKMQEIIARDSP 135
            AH+MA+A++ ++P+  + IGP I++GFYYD D ++   S ++ A IEK M++I   + P
Sbjct: 1   TAHLMAQAIKRLYPQALLTIGPAIKEGFYYDIDFQKHDISKNDFAAIEKMMKQISLENHP 60

Query: 136 FLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVK 195
            +++ +S++KA+E+F +    YK+ +LE    +E +++Y QGE+FDLCRG H+  T  + 
Sbjct: 61  IIREEVSYQKAKEIFANN--PYKIVLLEK-HKEEVISIYHQGEFFDLCRGGHLLKTS-LM 116

Query: 196 KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDL 255
           K FKL+K++G+Y++ ++    L+RIYGT++  +Q L  +L  LEE ++RDH++L +E+DL
Sbjct: 117 KHFKLLKISGSYFQSNAKNQTLTRIYGTSFFQKQALIDHLQLLEERKQRDHKRLNKELDL 176

Query: 256 FHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDS 313
           F  +++ G G+ F   KG  + + +  Y+  +++  +Y  + TP + +  L++ SGH + 
Sbjct: 177 FMFSKEVGLGLPFLLPKGATLRRIVERYIVDKELSYEYHHVYTPIMTNTELYRISGHLEH 236

Query: 314 YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP 373
           Y  NMF V   +          L+PMNCP H+ ++    +SY+ELP R+AE G ++R E 
Sbjct: 237 YAENMFPVMRLESG----EQLVLRPMNCPHHMIIYKKTPRSYKELPFRIAELGMMHRFEK 292

Query: 374 SGSLHGLMRV 383
           SG++ GL RV
Sbjct: 293 SGAVSGLQRV 302


>gi|226320444|ref|ZP_03796010.1| threonyl-tRNA synthetase [Borrelia burgdorferi 29805]
 gi|226234086|gb|EEH32801.1| threonyl-tRNA synthetase [Borrelia burgdorferi 29805]
          Length = 263

 Score =  227 bits (579), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 114/249 (45%), Positives = 165/249 (66%), Gaps = 5/249 (2%)

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           RHS AH+MAEAV  ++P  ++AIGP I+DGFYYDF+ ++  + D L  IE +M+EI+   
Sbjct: 15  RHSIAHVMAEAVLDLFPNTKIAIGPPIKDGFYYDFEFKKQITEDSLLDIENRMREILKTG 74

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQ 193
           S F K+ +S E+A E+F  K E YK++++++   +  V++Y+   + DLCRGPHV +  +
Sbjct: 75  SSFEKEIISVEQALEIF--KDEPYKIDLIKNFDLQNEVSIYKSHNFVDLCRGPHVENMNK 132

Query: 194 VK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLARE 252
           +  K FKL  +AGAYWRG    PML+RIYGT WN ++EL  YL   EE +KRDHRKL +E
Sbjct: 133 IDPKAFKLTSIAGAYWRGSEKNPMLTRIYGTLWNNEKELRSYLNLREEIKKRDHRKLGKE 192

Query: 253 MDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGH 310
           +DLF I E+ G G++F+H  G KI   +  + R +  K+ Y+ + TP +    LWQ SGH
Sbjct: 193 LDLFSIHEEIGPGLVFFHPNGAKIRALIEDFWREEHSKNGYDILFTPHIGKSWLWQTSGH 252

Query: 311 WDSYRANMF 319
            D Y+ +MF
Sbjct: 253 LDFYKDSMF 261


>gi|226304250|ref|YP_002764208.1| threonyl-tRNA synthetase [Rhodococcus erythropolis PR4]
 gi|226183365|dbj|BAH31469.1| putative threonyl-tRNA synthetase [Rhodococcus erythropolis PR4]
          Length = 406

 Score =  222 bits (566), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 127/374 (33%), Positives = 196/374 (52%), Gaps = 18/374 (4%)

Query: 245 DHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQ 302
           DHR+L R+++ F      G+G+  W   G  I   L  +   +  +   + + TP +  +
Sbjct: 4   DHRELGRDLEFFATTPIVGAGLPLWLPDGAVIRNELEKFAAEQAARSGCQGVYTPVMAKK 63

Query: 303 HLWQQSGHWDSYRANMFA-VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
            L+++SGHW  +  +MF  +K   ++      F L+P NCP H  VF    +SYRELP R
Sbjct: 64  ELYERSGHWSKFSEDMFPEMKIGGES------FLLRPANCPHHAQVFAARGRSYRELPFR 117

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           + E GS++R+E SG L GL RVR    DDAHVFC++EQ+  E +   + I   Y   G  
Sbjct: 118 VRELGSMFRSELSGVLSGLSRVRQINLDDAHVFCSREQVQAEVIVALDAIERCYSTLGIA 177

Query: 422 KIMVKLSTR--PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           +   +LS R    + +G+D  W DAE+ ++G L+         I      GE AFYGPK 
Sbjct: 178 ERKYRLSIRGGEGQYLGTDEQWADAEDHLRGALNARS------IEYVEAKGEAAFYGPKI 231

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +  ++DA GR+    T+Q+DFN P RF+  Y      K  PVMIHR + GS+ER   ++I
Sbjct: 232 DVQVRDAHGREETLSTVQLDFNQPERFDLEYTAEDGSKVRPVMIHRGLLGSMERMTALLI 291

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E F+G +P WL+P Q  +  +       A+ +   L++  + +     + ++  +IRE  
Sbjct: 292 ERFEGRMPPWLAPNQVSILPVGDRHQVEAERLRADLEARDVRVAI-APDGSLGRRIREAR 350

Query: 600 IKKIPIIIICGDKE 613
             + P I + GD E
Sbjct: 351 THRDPYIAVIGDNE 364


>gi|21222189|ref|NP_627968.1| threonyl tRNA synthetase [Streptomyces coelicolor A3(2)]
 gi|10432482|emb|CAC10316.1| putative threonyl tRNA synthetase [Streptomyces coelicolor A3(2)]
          Length = 430

 Score =  222 bits (565), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 132/401 (32%), Positives = 203/401 (50%), Gaps = 26/401 (6%)

Query: 225 WNTQQELTQYLYFLEESEKRDH--RKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLIS 281
           W   +E T +      S  RDH  R+L RE+ LF      G+G+ +W   G  +  TL  
Sbjct: 6   WTVPRETTVHDRNHARSHDRDHDHRRLGRELALFDTDPLMGAGLPYWLPDGAVVRHTLEE 65

Query: 282 YMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK--CADDTIKDLRTFALKP 338
           Y+R  + +  Y  + +P +  + L++ SGHW+ YR +MF      A++ +       L+P
Sbjct: 66  YVREAERRAGYRHVYSPVLGKRELYEISGHWEHYRDDMFPPMELGAEEVV-------LRP 118

Query: 339 MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE 398
             CP H  V+    +SYRELP+R+AE G++YR+EPSG L GL RVR    +DAH+FCT +
Sbjct: 119 SLCPHHALVYRSRARSYRELPLRIAELGAMYRSEPSGVLGGLSRVRAIHLNDAHIFCTPD 178

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE--KRVGSDALWDDAENIMKGVLDTIK 456
           Q   E      LI   + D G      +LS      K V    LW  A  +++  LD + 
Sbjct: 179 QAAAEARAALGLIRRAHADLGIRAARHRLSLPGPGGKYVADPELWRRATALLEEALDGLP 238

Query: 457 NSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE 516
             + +        GE AFYGPK +  ++DA GR+    T+Q+DF+ P RF   Y+     
Sbjct: 239 YEAVE--------GEAAFYGPKIDVQIEDAAGRESTLSTVQIDFHQPERFGLRYLGPDGA 290

Query: 517 KCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLK 576
           +  PVM+HR+V GS+ER +  +IE   G  P WL+P+Q +V  +  +  E A  +     
Sbjct: 291 RHRPVMVHRSVIGSVERAVAHLIEAHGGAFPAWLAPVQLVVLPVAGAQREAAYALVRQAT 350

Query: 577 SHHLSIE-TDFRNETINYKIREHSIKKIPIIIICGDKEASE 616
              L  E  D    ++  ++R  + +K+P   + G +EA +
Sbjct: 351 DLGLRAEVADPERGSLGARVR--AARKVPYQAVIGVREAQD 389


>gi|297201097|ref|ZP_06918494.1| threonyl-tRNA synthetase [Streptomyces sviceus ATCC 29083]
 gi|197712117|gb|EDY56151.1| threonyl-tRNA synthetase [Streptomyces sviceus ATCC 29083]
          Length = 413

 Score =  222 bits (565), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 126/384 (32%), Positives = 193/384 (50%), Gaps = 16/384 (4%)

Query: 245 DHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           DHR+L RE+DLF      G+G+ +W   G  +   L  Y+R   +   Y  + +P +  +
Sbjct: 6   DHRRLGRELDLFDTDPLMGAGLPYWLPDGAVVRHVLEEYVRETERAAGYRHVYSPVLGKR 65

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            L++ SGHWD Y  +MF          +     L+P  CP H  ++     SYRELP+R 
Sbjct: 66  ELYEISGHWDHYSDDMFPPMRLGGGEGEGEEVVLRPSLCPHHALIYRSRSHSYRELPLRF 125

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AE G +YR+E SG L GL RVR    +DAH+FCT EQ   E      LI   Y D G   
Sbjct: 126 AELGGMYRSELSGVLGGLTRVRSIQLNDAHIFCTPEQAVAEARAALALIRRAYDDLGIRA 185

Query: 423 IMVKLSTRPE---KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
              +LS   +   K V    LW  A  +++ VLD I+  S +        GE AFYGPK 
Sbjct: 186 ARYRLSLPGDGDGKFVPDPELWRRATALLEEVLDGIEYESVE--------GEAAFYGPKI 237

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +  + D  GR+    T+Q+DF+ P RF+  Y+     K  PVM+HR++ GS+ER +  +I
Sbjct: 238 DVQISDPAGRESTLSTVQIDFHQPERFDLHYIGRDGRKHRPVMVHRSIIGSVERAVAHLI 297

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIE-TDFRNETINYKIREH 598
           E   G  P+WL+P+Q ++  +     E A ++    ++  +  E +   + T+  ++R  
Sbjct: 298 EAHGGAFPVWLAPVQLVILPVAEEQEERAHDLVRRAEARGIRAELSGPGHGTLGARVR-- 355

Query: 599 SIKKIPIIIICGDKEASERSIGIR 622
           + + +P   + G +EA      +R
Sbjct: 356 AARLVPYQAVIGQREADAGCAAVR 379


>gi|302545670|ref|ZP_07298012.1| threonine-tRNA ligase [Streptomyces hygroscopicus ATCC 53653]
 gi|302463288|gb|EFL26381.1| threonine-tRNA ligase [Streptomyces himastatinicus ATCC 53653]
          Length = 403

 Score =  222 bits (565), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 124/387 (32%), Positives = 194/387 (50%), Gaps = 18/387 (4%)

Query: 245 DHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQ 302
           DHRKL RE+ LF      G+G+ +W   G  + + L  Y+R  + +  Y  + +P +  +
Sbjct: 3   DHRKLGRELGLFGTDPLIGAGLPYWLPDGAAVREALEEYIRAEERRAGYRHVYSPVLGKR 62

Query: 303 HLWQQSGHWDSYRANMFA-VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
            L++ SGHW  YR +MF  +    + +       L+P  CP H  ++    +SYRELP+R
Sbjct: 63  ELYEVSGHWAHYRDDMFPPMDVGGEEV------VLRPSLCPHHAVIYRSRARSYRELPLR 116

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AE G +YR E SG L GL RVR    +DAH+FC  EQ+  E      +I   Y+  G  
Sbjct: 117 MAELGGMYRAELSGVLGGLTRVRAIQLNDAHIFCALEQVAGEVEGALGMIRRAYEAMGIR 176

Query: 422 KIMVKLSTRPE--KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
            +  +LS   +  K V    +W+ +  ++  VL  +    +      V  GE AFYGPK 
Sbjct: 177 AVRYRLSLPGDSGKFVAGSEVWERSVGVLGEVLRRVGVPYE------VGKGEAAFYGPKI 230

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +  + D  GR++   T+QVDF+ P RF   YV +   K  PVM+HR++ GS+ER +  ++
Sbjct: 231 DVQVADGAGREFTLSTVQVDFHQPERFGLQYVGADGAKHRPVMVHRSIIGSVERAVAQLV 290

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E   G  P WL+P+Q +V  ++     +A+          L    D   E  +   R   
Sbjct: 291 EVHGGAFPGWLAPVQVVVLPVSEGEAGHAEAFVERCVERGLRARVDG-PERGSLGARVRG 349

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGS 626
            + +P  ++ G KEA+E  + +R  G 
Sbjct: 350 ARLVPYQVVIGAKEAAEGQVALRLRGG 376


>gi|325141961|gb|EGC64399.1| Threonyl and Alanyl tRNA synthetase second additional domain
           protein [Neisseria meningitidis 961-5945]
          Length = 234

 Score =  221 bits (564), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 102/228 (44%), Positives = 154/228 (67%), Gaps = 2/228 (0%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           + +T PDGS++ +    T + +A SI   LAK AVA  +NGK+ D  DP+ E S ++IIT
Sbjct: 2   LNITLPDGSVRQYESPVTVAQIAASIGAGLAKAAVAGRVNGKLVDACDPIVEDSAVQIIT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A IE
Sbjct: 62  PKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAIE 121

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M+E+IA+D   +K      +A ++F+ + E YK+ +++ +P  E + +Y   E+ D+C
Sbjct: 122 ARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLIDDMPEVEAMGMYHHQEYVDMC 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQEL 231
           RGPHV +T +  K FKL K+AGAYWRGDSN  ML RIYGTAW   Q +
Sbjct: 182 RGPHVPNT-RFLKNFKLTKLAGAYWRGDSNNEMLQRIYGTAWANVQAM 228


>gi|294632148|ref|ZP_06710708.1| threonyl-tRNA synthetase [Streptomyces sp. e14]
 gi|292835481|gb|EFF93830.1| threonyl-tRNA synthetase [Streptomyces sp. e14]
          Length = 442

 Score =  221 bits (564), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 128/391 (32%), Positives = 201/391 (51%), Gaps = 22/391 (5%)

Query: 239 EESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINT 296
           EE+   DHRKL RE+DLF      G+G+ +W   G  +  TL  Y+R  + +  Y  + +
Sbjct: 31  EETAMHDHRKLGRELDLFDTDPLLGAGLPYWLPDGATVRHTLEEYIRDAERRAGYRHVYS 90

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL--RTFALKPMNCPGHVAVFNHGLKS 354
           P +  + L++ SGHWD Y  +MF          DL      L+P  CP H  ++     S
Sbjct: 91  PVLGKRELYEISGHWDHYSDDMF-------PPMDLGGEQVVLRPSLCPHHAVIYRSRAHS 143

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           +RELP+R+AE G +YR+E SG L GL RVR    +DAH+FCT +Q+  E      +I   
Sbjct: 144 HRELPLRMAELGGMYRSELSGVLGGLTRVRAIQLNDAHIFCTLDQVAEEAGAALEMIRRA 203

Query: 415 YKDFGFEKIMVKLSTRPE--KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
           Y+  G      +LS      K V +   W  A  ++  VLD      +  +      GE 
Sbjct: 204 YEALGVTPARYRLSLPGPGGKYVAAPEKWRRATALLTEVLD------RSGLPYEAAEGEA 257

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           AFYGPK +  + D+ GR+    T+QVDF+ P RF+  Y+ +   +  PVM+HR++ GS+E
Sbjct: 258 AFYGPKIDVQVADSAGRESTLSTVQVDFHQPERFDLHYIGADGARHRPVMVHRSIIGSVE 317

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE-TI 591
           R +  ++E   G  P WL+P+Q +V  ++++ +  A+ +A       L  E       T+
Sbjct: 318 RAVAHLVEAHGGAFPAWLAPVQLVVLPVSAAELPQAEALARRCTDLGLRAEIAAPERGTL 377

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIR 622
             +IR  + + +P   + G KEA++  + +R
Sbjct: 378 GARIR--ASRLVPYQAVIGAKEATDDHVSLR 406


>gi|229494206|ref|ZP_04387969.1| threonyl-tRNA synthetase [Rhodococcus erythropolis SK121]
 gi|229318568|gb|EEN84426.1| threonyl-tRNA synthetase [Rhodococcus erythropolis SK121]
          Length = 406

 Score =  221 bits (563), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 127/374 (33%), Positives = 195/374 (52%), Gaps = 18/374 (4%)

Query: 245 DHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQ 302
           DHR+L R+++ F      G+G+  W   G  I   L  +   +  +     + TP +  +
Sbjct: 4   DHRELGRDLEFFATTPIVGAGLPLWLPDGAVIRNELEKFAAEQAARSGCRGVYTPVMAKK 63

Query: 303 HLWQQSGHWDSYRANMFA-VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
            L+++SGHW  +  +MF  +K   ++      F L+P NCP H  VF    +SYRELP R
Sbjct: 64  ELYERSGHWSKFSDDMFPEMKIGGES------FLLRPANCPHHAQVFAARGRSYRELPFR 117

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           + E GS++R+E SG L GL RVR    DDAHVFC++EQ+  E +   + I   Y   G  
Sbjct: 118 VRELGSMFRSELSGVLSGLSRVRQINLDDAHVFCSREQVQAEVIVALDAIERCYSTLGIA 177

Query: 422 KIMVKLSTR--PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           +   +LS R    + +G+D  W DAE+ ++G L+         I      GE AFYGPK 
Sbjct: 178 ERKYRLSIRGGEGQYLGTDEQWADAEDHLRGALNARS------IEYVEAKGEAAFYGPKI 231

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +  ++DA GR+    T+Q+DFN P RF+  Y      K  PVMIHR + GS+ER   ++I
Sbjct: 232 DVQVRDAHGREETLSTVQLDFNQPERFDLEYTAEDGSKVRPVMIHRGLLGSMERMTALLI 291

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E F+G +P WL+P Q  +  +       A+ +   L++  + +     + ++  +IRE  
Sbjct: 292 ERFEGRMPPWLAPNQVSILPVGDRHQVEAERLRADLEARDVRVAI-APDGSLGRRIREAR 350

Query: 600 IKKIPIIIICGDKE 613
             + P I + GD E
Sbjct: 351 THRDPYIAVIGDNE 364


>gi|163840211|ref|YP_001624616.1| threonyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
 gi|162953687|gb|ABY23202.1| threonyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
          Length = 453

 Score =  220 bits (560), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 122/405 (30%), Positives = 211/405 (52%), Gaps = 18/405 (4%)

Query: 245 DHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQVLDQ 302
           DHR+L RE+DLF      G G+  W   G  I   L    +   ++  Y+ + +P +  +
Sbjct: 52  DHRQLGRELDLFASNPLIGPGLPLWLPDGAVIRTELEKLAVEESLRSGYQRVYSPVLAKR 111

Query: 303 HLWQQSGHWDSYRANMFA-VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
            L+++SG W  +  +MF  ++  ++ +       L+P NCP H  +F     S+RELP+R
Sbjct: 112 ELYERSGRWAKFSEDMFPPLRIGNEEL------VLRPANCPHHAMLFAARPHSWRELPIR 165

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
            AE GS++R+E SG L GL RVR    DD HVFCT EQ  +E ++    I + Y   G E
Sbjct: 166 YAELGSMFRSELSGVLSGLSRVRQINLDDCHVFCTPEQAQSEVVRGIQAISAGYSILGLE 225

Query: 422 KIMVKLSTRPEKR--VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
               +LS R       GS + W  AE+++K  LD +       +    + GE AFYGPK 
Sbjct: 226 PDYFRLSARDSGTSFAGSASDWAAAESVLKAALDELG------LPYRRVAGEAAFYGPKI 279

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +    DA G++    T+Q+DF  P RF+  Y+        P+M+HR +FG++ER + ++I
Sbjct: 280 DVQFFDAAGKEETLSTVQLDFVQPERFDLAYIGDDGAAHRPMMVHRGLFGAMERTVALLI 339

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E  +G +P WL+P+Q  V  ++ +      EI+    +  + +  D  + ++  ++R+ S
Sbjct: 340 EKHQGKMPPWLAPVQLAVLPVSDTQAARCAEISAQALAAGIRVIVD-HDGSVGSRVRKTS 398

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            +++  + + G +E+    + +   G+   Q + + +AI ++ ++
Sbjct: 399 QRRVSWLAVVGSQESESGKLSLSIPGARPAQLLPVTEAIELMRQK 443


>gi|158314451|ref|YP_001506959.1| threonyl-tRNA synthetase [Frankia sp. EAN1pec]
 gi|158109856|gb|ABW12053.1| threonyl-tRNA synthetase [Frankia sp. EAN1pec]
          Length = 428

 Score =  218 bits (554), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 130/389 (33%), Positives = 198/389 (50%), Gaps = 18/389 (4%)

Query: 239 EESEKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINT 296
           EE+   DHRKL RE+DLF      G+G+ +W   G  +  TL  Y+R  + +  Y+ + +
Sbjct: 9   EETTMHDHRKLGRELDLFDTDPLIGAGLPYWLPDGAAVRHTLEEYIRTAERRAGYQHVYS 68

Query: 297 PQVLDQHLWQQSGHWDSYRANMFA-VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P +  + L++ SGHW  Y  +MF  +    + I       L+P  CP H  ++     SY
Sbjct: 69  PVLGKRELYEISGHWSHYSDDMFPPMDLGGEQI------VLRPSLCPHHALIYRSRSHSY 122

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           R+LP+R+AE G +YR+E SG L GL RVR    +DAH+FCT +Q+ +E     ++I   Y
Sbjct: 123 RDLPLRIAELGGMYRSELSGVLGGLTRVRAIHLNDAHIFCTLDQVADEARNALDMIRHAY 182

Query: 416 KDFGFEKIMVKLSTRPE--KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           +  G      +LS      K V +  LW  +  ++  VLD      Q  +      GE A
Sbjct: 183 EALGITPRRYRLSLPGPGGKYVAAPELWQRSTALLTDVLD------QAGLPYEAAEGEAA 236

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  + D  GR+    TIQVDF+ P +F+  Y+   S +  PVM+HR++ GS+ER
Sbjct: 237 FYGPKIDVQIIDGAGRESTLSTIQVDFHQPEQFDLHYIGPDSARHRPVMVHRSIIGSVER 296

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
            +  +IE   G  P WL+P Q +V  IT S +  A  +A       L  +     E  + 
Sbjct: 297 AVAHLIEQHGGAFPAWLAPTQIVVLPITDSELPNAAALARQCTDLGLRAQI-IGPERGSL 355

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIR 622
             R    K +P   + G +E+++  I +R
Sbjct: 356 GARVRQSKLVPYQAVIGAQESTDGHIALR 384


>gi|312198148|ref|YP_004018209.1| threonyl-tRNA synthetase [Frankia sp. EuI1c]
 gi|311229484|gb|ADP82339.1| threonyl-tRNA synthetase [Frankia sp. EuI1c]
          Length = 411

 Score =  217 bits (553), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 130/388 (33%), Positives = 204/388 (52%), Gaps = 28/388 (7%)

Query: 245 DHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           DHRKL RE+DLF      G+G+ +W   G  +  TL  Y+R  + +  Y+ + +P +  +
Sbjct: 3   DHRKLGRELDLFDTDPLIGAGLPYWLPDGATVRHTLEEYIRAVERRAGYQHVYSPVLGKR 62

Query: 303 HLWQQSGHWDSYRANMFA-VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
            L++ SGHW  Y  +MF  +    + +       L+P  CP H  ++     SYRELP+R
Sbjct: 63  ELYEISGHWSHYSDDMFPPMDLGGEQV------VLRPSLCPHHALIYRSRSHSYRELPLR 116

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AE G +YR+E SG L GL RVR    +DAH+FCT EQ+ +E     +LI   Y+  G  
Sbjct: 117 IAELGGMYRSELSGVLGGLTRVRAIQLNDAHIFCTLEQVADEARAALDLIRHAYEALGLT 176

Query: 422 KIMVKLSTRPE--KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
               +LS      K V +  LW  +  ++  VLD      +  +      GE AFYGPK 
Sbjct: 177 PSRYRLSLPGPGGKYVAAPDLWRRSVALLTEVLD------RSGLPYEAAEGEAAFYGPKI 230

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +  + D  GR+    T+Q+DF+ P RF+  YV     +  PVM+HR++ GS+ER +  ++
Sbjct: 231 DVQVTDGAGRESTLSTVQIDFHQPERFDLRYVGPDGARHRPVMVHRSIIGSVERAVAHLL 290

Query: 540 ENFKGNLPLWLSPIQAIVTTITSS----AVEYAQEIANL-LKSHHLSIETDFRNETINYK 594
           E   G LP WL+PIQ ++  I++S    AV   +  A+L L++  L  +      ++  +
Sbjct: 291 EQHGGALPAWLAPIQLVILPISASELPAAVALTRRCADLGLRAQVLGPD----RGSLGAR 346

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIR 622
           +R    + +P   + G KEAS+  + +R
Sbjct: 347 VR--LARLVPYQAVLGAKEASDGHVSLR 372


>gi|145613850|ref|XP_363396.2| hypothetical protein MGG_01322 [Magnaporthe oryzae 70-15]
 gi|145020862|gb|EDK04991.1| hypothetical protein MGG_01322 [Magnaporthe oryzae 70-15]
          Length = 367

 Score =  217 bits (553), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 117/301 (38%), Positives = 166/301 (55%), Gaps = 27/301 (8%)

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
           + LKPMNCPGH  +F   L+SYR+LP+R A+F  ++RNE SG+L GL RVR F QDD H+
Sbjct: 23  YGLKPMNCPGHCLIFASQLRSYRDLPIRYADFSPLHRNEVSGALSGLTRVRRFHQDDGHI 82

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR-VGSDALWDDAENIMKGVL 452
           FC   Q+  E  +  + + + Y         + LSTRPE   +G  A WD AE  +K  L
Sbjct: 83  FCRPSQIEEEIRQTLSFVKTTYDTLKLGPYRLVLSTRPEDHYIGELAEWDQAETALKAAL 142

Query: 453 DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFY-- 510
           D++    +  +N     G+GAFYGPK + IL+D+ G++ Q  T+Q+DF LP RF   Y  
Sbjct: 143 DSL--GERWTLNP----GDGAFYGPKIDIILQDSDGKEHQTATVQLDFQLPKRFELEYQA 196

Query: 511 -------VNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSS 563
                   N+ +    PVMIHRAV GS+ER + ++IE++ G  P WL+P Q +V T+  +
Sbjct: 197 PPPENGDANATALLERPVMIHRAVLGSVERLMALLIEHYNGKWPFWLNPRQVMVVTVNDT 256

Query: 564 AVEYA-----------QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
           A   A           QE   +  S  L+I+ D    ++  KIRE   K    I+  G+ 
Sbjct: 257 ARVVAKAFAVRNQLLGQEEGEVAASSQLAIDIDDSARSLPLKIREAKSKGYGAIVTVGNH 316

Query: 613 E 613
           E
Sbjct: 317 E 317


>gi|329577160|gb|EGG58630.1| TGS domain protein [Enterococcus faecalis TX1467]
          Length = 238

 Score =  217 bits (552), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 105/223 (47%), Positives = 157/223 (70%), Gaps = 5/223 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           I +TFPDG++K F    T  DVA+SIS SLAKKA+A   NG + DL  P+ E GS+EI+T
Sbjct: 18  IHITFPDGAVKPFDSGVTTFDVAKSISNSLAKKALAGKFNGVLIDLDRPIAEDGSLEIVT 77

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
           P+   +L ++RHS AH+MA A++ ++P ++  +GP I+ GFYYD D  E P ++++L  I
Sbjct: 78  PDHEDALGILRHSSAHLMANALRRLFPNIKFGVGPAIDSGFYYDTDNGESPVTAEDLPAI 137

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M +I+  ++P +++ +S  +A ELF    + YKVE++  +P  E +T+Y QG++ DL
Sbjct: 138 EAEMMKIVKENNPIVRKEISRAEALELFAD--DPYKVELITDLPEDEIITVYDQGDFVDL 195

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAW 225
           CRG HV STG++ + FKL+ VAGAYWRG+S+  M+ RIYGTA+
Sbjct: 196 CRGVHVPSTGRI-QVFKLLSVAGAYWRGNSDNHMMQRIYGTAF 237


>gi|73981319|ref|XP_860710.1| PREDICTED: similar to threonyl-tRNA synthetase-like 1 isoform 3
           [Canis familiaris]
          Length = 304

 Score =  217 bits (552), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 111/277 (40%), Positives = 162/277 (58%), Gaps = 8/277 (2%)

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           +F H  +S+RELP+RLA+FG ++R E SGSL GL R+R F QDDAH+FC  +Q+  E   
Sbjct: 1   MFAHRPRSWRELPLRLADFGVLHRAEASGSLGGLTRLRCFQQDDAHIFCAPDQLEEEIQG 60

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
             + + S+Y   GF    + LSTRP   +G   LWD AE +++  L+        +    
Sbjct: 61  CLDFLRSVYAVLGF-SFRLALSTRPSGFLGESCLWDQAEQVLQRALEEFGEPWDLKP--- 116

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
              G+GAFYGPK +  L DA+GR  QCGTIQ+DF LP RF+  Y         PV+IHRA
Sbjct: 117 ---GDGAFYGPKIDVHLHDALGRPHQCGTIQLDFQLPLRFDLQYKGQAGVLERPVLIHRA 173

Query: 527 VFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF 586
           V GS+ER +G++ E++ G  PLWLSP Q +V  + +   EYA+E    L++  L  + D 
Sbjct: 174 VLGSVERMLGVLAESYGGKWPLWLSPFQVVVIPVGAEQEEYAREAQQRLQAAGLVCDLDA 233

Query: 587 RNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
            +  T++ ++R   +       + G KE S++++ IR
Sbjct: 234 DSGLTLSRRVRRAQLAHYNFQFVVGQKEQSKKTVNIR 270


>gi|145593399|ref|YP_001157696.1| tRNA synthetase, class II (G, H, P and S) [Salinispora tropica
           CNB-440]
 gi|145302736|gb|ABP53318.1| tRNA synthetase, class II (G, H, P and S) [Salinispora tropica
           CNB-440]
          Length = 405

 Score =  215 bits (548), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 124/384 (32%), Positives = 207/384 (53%), Gaps = 21/384 (5%)

Query: 245 DHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           DHR+L R++ LF      G+G+  W   G      +  Y+R  + +  Y+ + TP +  +
Sbjct: 3   DHRRLGRDLGLFTSDPLAGAGLPLWLPAGAAARHAVEEYLRDLERQAGYQHVVTPPLGRR 62

Query: 303 HLWQQSGHWDSYRANMFAVK--CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            L+++SGH D +   MF      ADD +       L+P  CP H  V+    +S+R+LP+
Sbjct: 63  ELFERSGHLDHFAEEMFPPMRLSADDEL------VLRPSLCPHHALVYRCRGRSWRDLPL 116

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G +YR E SG L GL RVR  + +DAH FC  EQ+  E  +I  LI   +   G 
Sbjct: 117 RIAEMGGMYRAERSGVLGGLARVRAISLNDAHNFCALEQVGAEVAEILRLIRVAHAALGV 176

Query: 421 EKIMVKLSTRP--EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
                +LS R   ++ VG +  W  AE +++  LD ++ +          +G  AFYGPK
Sbjct: 177 RPAGFRLSLRGSGQRYVGEEDDWARAEELLRAALDGVEYTED--------VGAAAFYGPK 228

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +  ++DA GR+W   T+Q+DF+ P RF+  Y++S   +  PV++HR++ GS+ER    +
Sbjct: 229 IDIQVEDAAGREWTLSTVQLDFDKPERFDLSYIDSGGARRRPVLVHRSLVGSMERLFSYL 288

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE  +G  P+W +P+Q +V  + ++    A E+    ++  L  E D R+ ++  +IR+ 
Sbjct: 289 IEVHEGAFPVWYAPVQLVVLPVAAAQDGAADEVVAAARAAGLRAEVD-RSGSLGGRIRDA 347

Query: 599 SIKKIPIIIICGDKEASERSIGIR 622
           +  +IP + + G +EA+   + +R
Sbjct: 348 AQARIPYVAVVGPREAAAGHVLLR 371


>gi|86742091|ref|YP_482491.1| threonyl-tRNA synthetase [Frankia sp. CcI3]
 gi|86568953|gb|ABD12762.1| threonyl-tRNA synthetase [Frankia sp. CcI3]
          Length = 438

 Score =  215 bits (548), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 126/403 (31%), Positives = 197/403 (48%), Gaps = 33/403 (8%)

Query: 245 DHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           DHRKL RE++LF      GSG+ +W   G  +  TL  Y+R  + +  Y  + +P +  +
Sbjct: 3   DHRKLGRELELFDTDPLIGSGLPYWLPAGAVVRHTLEEYIRGVERRAGYRHVYSPVLGKR 62

Query: 303 HLWQQSGHWDSYRANMF----------------AVKCADDTIKDLR----TFALKPMNCP 342
            L++ SGHW  YR +MF                  +   + +   R       L+P  CP
Sbjct: 63  ELYEISGHWSHYRDDMFPPMDLSGERLGGERLGGERLGGERLGGERLGGEQMVLRPSLCP 122

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN 402
            H  ++     SYR+LP+R+AE G +YR+E SG L GL RVR    +DAH+FC  EQ+ +
Sbjct: 123 HHALIYRSRAHSYRDLPLRMAELGGMYRSELSGVLGGLTRVRAIQLNDAHIFCAPEQVAD 182

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRPE--KRVGSDALWDDAENIMKGVLDTIKNSSQ 460
           E      LI   Y   G      +LS      K VG   +W  +  ++  VLD    + +
Sbjct: 183 EARAALELIREAYGALGVSPARYRLSLPGPGGKYVGDPGMWRRSAALLTEVLDAAGVAYE 242

Query: 461 DRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHP 520
                  + GE AFYGPK +  + D+ GR+    T+Q+DF+ P RF+  Y         P
Sbjct: 243 ------AVEGEAAFYGPKIDVQIVDSAGREATLSTVQIDFHQPERFDLRYAGPDGAMRRP 296

Query: 521 VMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHL 580
           VM+HR+V GS+ER +  +IE+  G  P WL+P+Q +   I+ + V +A  +        L
Sbjct: 297 VMVHRSVIGSVERAVAHLIESHGGAFPPWLAPVQLVALPISDAEVPHALALVRQAADRGL 356

Query: 581 SIETDF-RNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
             E    +  T+  ++R  + + +P   I G +EA++  + +R
Sbjct: 357 RAEAAGPQRGTLGARVR--AARLVPYQAIIGAREAADERVSLR 397


>gi|115397539|ref|XP_001214361.1| threonyl-tRNA synthetase, mitochondrial precursor [Aspergillus
           terreus NIH2624]
 gi|114192552|gb|EAU34252.1| threonyl-tRNA synthetase, mitochondrial precursor [Aspergillus
           terreus NIH2624]
          Length = 380

 Score =  215 bits (547), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 121/317 (38%), Positives = 168/317 (52%), Gaps = 36/317 (11%)

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
           ++ LKPMNCPGH  +F     SYRELP+R A+F  ++RNE SGSL GL RVR F QDD H
Sbjct: 13  SYGLKPMNCPGHCLLFKSQNHSYRELPIRYADFSPLHRNEVSGSLSGLTRVRRFHQDDGH 72

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR-VGSDALWDDAENIMKGV 451
           +FC  +Q+  E       +  +   FG     + LSTRPEK  +GS ALWD AE  ++  
Sbjct: 73  IFCRPQQIKGEIASALGFVDMVMTTFGLGPYRLVLSTRPEKDFIGSLALWDSAEAQLREA 132

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
           LD+     +  +N     G+GAFYGPK +  L+D  G+  Q  TIQ+D NLP RF   Y 
Sbjct: 133 LDS--TGREWAMNE----GDGAFYGPKIDIQLQDQTGKYHQLSTIQLDMNLPQRFGLEYQ 186

Query: 512 NSHSE---------KCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITS 562
            +  E         +  PV++HRA FGS+ERF+ ++IE + G  P WLSP Q I+ T+  
Sbjct: 187 VAEGEEDYNPATPGRATPVLVHRANFGSLERFLALLIEQYAGRWPFWLSPRQGIILTVNQ 246

Query: 563 --SAVEYAQEIANLLKSHH------------------LSIETDFRNETINYKIREHSIKK 602
             + V+ AQE A ++                        I+ D  + T+  KI+     K
Sbjct: 247 DEAVVQQAQEAAGMISGFRALRPGDGTPTPLSSVDSTFLIDVDTSSTTLGKKIQRAKQMK 306

Query: 603 IPIIIICGDKEASERSI 619
             +I I G K+ ++  I
Sbjct: 307 YNLIFILGPKDVAQSRI 323


>gi|39939231|ref|NP_950997.1| threonyl-tRNA synthetase [Onion yellows phytoplasma OY-M]
 gi|39722340|dbj|BAD04830.1| threonyl-tRNA synthetase [Onion yellows phytoplasma OY-M]
          Length = 308

 Score =  214 bits (545), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 108/310 (34%), Positives = 179/310 (57%), Gaps = 15/310 (4%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANM 318
           E G G+ FW  KG  + + +  Y+  +++  DY  + TP + +  L++ SGH D Y +NM
Sbjct: 5   EVGLGLPFWLPKGATVRRIVERYIVDKELSYDYHHVYTPIMANTELYRISGHLDHYASNM 64

Query: 319 FAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLH 378
           F +     T+++     L+PMNCP H+ ++     SY+ELP+R+AE G ++R E SG++ 
Sbjct: 65  FPIM----TLENGEKLVLRPMNCPHHMMIYKKTPHSYKELPLRIAELGMMHRFEKSGAVS 120

Query: 379 GLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR----PEKR 434
           GL RVR  T +DAH+F   +Q+  E  KI NLI+ +Y+DF  +   ++LS R     EK 
Sbjct: 121 GLQRVREMTLNDAHIFACPDQIKEEMKKIINLILEVYRDFNIKNYELRLSYRDPNDTEKY 180

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
              D +W  AE  +K  +  +    ++ I      GE AFYGPK +  +  A+G +    
Sbjct: 181 FNDDQMWHHAEKTLKETIQELSLPFKEAI------GEAAFYGPKLDVQVFTALGNEETLS 234

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQ 554
           T+Q+DF LP +F+  ++   ++   PV+IHRAV  ++ERF+  ++E  KG  PLW +P+Q
Sbjct: 235 TVQLDFLLPQKFDLTFIGEDNKHHRPVVIHRAVVSTMERFLAHLVEETKGVFPLWFAPVQ 294

Query: 555 AIVTTITSSA 564
            ++  +++ +
Sbjct: 295 VLLIPVSAPS 304


>gi|256786722|ref|ZP_05525153.1| threonyl tRNA synthetase [Streptomyces lividans TK24]
 gi|289770616|ref|ZP_06529994.1| threonyl-tRNA synthetase [Streptomyces lividans TK24]
 gi|289700815|gb|EFD68244.1| threonyl-tRNA synthetase [Streptomyces lividans TK24]
          Length = 421

 Score =  213 bits (543), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 124/375 (33%), Positives = 192/375 (51%), Gaps = 24/375 (6%)

Query: 249 LAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQ 306
           L RE+ LF      G+G+ +W   G  +  TL  Y+R  + +  Y  + +P +  + L++
Sbjct: 23  LGRELALFDTDPLMGAGLPYWLPDGAVVRHTLEEYVREAERRAGYRHVYSPVLGKRELYE 82

Query: 307 QSGHWDSYRANMFAVK--CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
            SGHW+ YR +MF      A++ +       L+P  CP H  V+    +SYRELP+R+AE
Sbjct: 83  ISGHWEHYRDDMFPPMELGAEEVV-------LRPSLCPHHALVYRSRARSYRELPLRIAE 135

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
            G++YR+EPSG L GL RVR    +DAH+FCT +Q   E      LI   + D G     
Sbjct: 136 LGAMYRSEPSGVLGGLSRVRAIHLNDAHIFCTPDQAAAEARAALGLIRRAHADLGIRAAR 195

Query: 425 VKLSTRPE--KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
            +LS      K V    LW  A  +++  LD +   + +        GE AFYGPK +  
Sbjct: 196 HRLSLPGPGGKYVADPELWRRATALLEEALDGLPYEAVE--------GEAAFYGPKIDVQ 247

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           ++DA GR+    T+Q+DF+ P RF   Y+     +  PVM+HR+V GS+ER +  +IE  
Sbjct: 248 IEDAAGRESTLSTVQIDFHQPERFGLRYLGPDGARHRPVMVHRSVIGSVERAVAHLIEAH 307

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIE-TDFRNETINYKIREHSIK 601
            G  P WL+P+Q +V  +  +  E A  +        L  E  D    ++  ++R  + +
Sbjct: 308 GGAFPAWLAPVQLVVLPVAGAQREAAYALVRQATDLGLRAEVADPERGSLGARVR--AAR 365

Query: 602 KIPIIIICGDKEASE 616
           K+P   + G +EA +
Sbjct: 366 KVPYQAVIGAREAQD 380


>gi|54023348|ref|YP_117590.1| putative threonyl-tRNA synthetase [Nocardia farcinica IFM 10152]
 gi|54014856|dbj|BAD56226.1| putative threonyl-tRNA synthetase [Nocardia farcinica IFM 10152]
          Length = 419

 Score =  213 bits (543), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 117/384 (30%), Positives = 205/384 (53%), Gaps = 20/384 (5%)

Query: 245 DHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           DHRKL RE+DLF      GSG+ +W   G  +   L  Y+R  + +  Y  +++P +  +
Sbjct: 20  DHRKLGRELDLFDTDPLIGSGLPYWLPSGGALRHALEEYIRTAEHRAGYRHVHSPVLGKR 79

Query: 303 HLWQQSGHWDSYRANMFA-VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
            L++ SGHW  YR +M+  +    + +       L+P  CP H  ++     SYRELP+R
Sbjct: 80  ELYEISGHWAHYREDMYPPMDVGGEQV------VLRPSLCPHHALIYRSRSHSYRELPLR 133

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF- 420
           +AE G++YR E SG L GL RVR    +DAH+FCT++Q+  E      +I   +   G  
Sbjct: 134 IAELGAMYRAELSGVLGGLSRVRAIHLNDAHIFCTEDQVGAEVHAALAMIARAHAALGIA 193

Query: 421 -EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
             +  + L     K V + A+W+ A  ++   ++ ++ +  D         E AFYGPK 
Sbjct: 194 PHRFRLSLPGPGGKYVPNPAMWERATGVL---VEALRAAGIDYEPAD---DEAAFYGPKI 247

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +    D+ GR++   T+QVDF+ P +F+  Y+ +   K  PVM+HR++ GS+ER +  ++
Sbjct: 248 DVQFLDSAGREFTLSTVQVDFHQPEQFDLCYIGADGAKHRPVMVHRSIIGSVERAVAHLV 307

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREH 598
           E   G  P+WL+P Q +V  +       A+++  +L++  +  E    ++ ++  +IR  
Sbjct: 308 EVHGGAFPVWLAPTQVVVLPLAGEQHAAAEDVVRVLRAADVRAELAGHDQGSLGARIR-- 365

Query: 599 SIKKIPIIIICGDKEASERSIGIR 622
           + +++P  ++ G KE +  ++ +R
Sbjct: 366 AGRQVPYQVVVGPKEVAAGTLAVR 389


>gi|297191715|ref|ZP_06909113.1| threonyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC
           25486]
 gi|197721430|gb|EDY65338.1| threonyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 408

 Score =  213 bits (543), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 130/410 (31%), Positives = 201/410 (49%), Gaps = 32/410 (7%)

Query: 245 DHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           DHRKL RE+ LF      G+G+ +W   G  +  TL  Y+R  + +  Y  + +P +  +
Sbjct: 3   DHRKLGRELGLFDTDPLIGAGLPYWLPDGATVRHTLEEYIRSAERRAGYRHVYSPVLGKR 62

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDL--RTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            L++ SGHW  Y  +MF          DL      L+P  CP H  ++     SYRELP+
Sbjct: 63  ELYEISGHWAHYSDDMF-------PPMDLGGEQVVLRPSLCPHHAVIYRSRSHSYRELPL 115

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G +YR+E SG L GL RVR    +DAH+FCT +Q+  E      +I   Y+  G 
Sbjct: 116 RMAELGGMYRSELSGVLGGLTRVRAIQLNDAHIFCTLDQVAEEARAALEMIRRAYEALGI 175

Query: 421 EKIMVKLSTRPE--KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
                +LS      K V +   W  +  ++  VLD      +  +      GE AFYGPK
Sbjct: 176 TPARYRLSLPGPGGKYVAAPEKWKRSTALLTDVLD------RSGLPYEAAEGEAAFYGPK 229

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +  + D  GR+    T+QVDF+ P +F+  Y+ +   +  PVM+HR++ GS+ER +  +
Sbjct: 230 IDVQVTDGAGRESTLSTVQVDFHQPEQFDLHYIGADGARHRPVMVHRSIIGSVERAVAHL 289

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIE-TDFRNETINYKIRE 597
           IE   G  P WL+P Q  +  I+ + + +A  +A       L  E       T+  ++RE
Sbjct: 290 IEQHGGAFPAWLAPTQVAILPISDAELPHAAALARRCAGLGLRAEIAGPERGTLGARVRE 349

Query: 598 HSIKKIPIIIICGDKEASERSIGIR----------RFGSTTTQKVSLLDA 637
              + +P   + G KEA++  + +R            G   T+ V+L+DA
Sbjct: 350 --ARLVPYQAVIGAKEAADDHVALRLRGGRRLDPQPVGEVLTRIVALVDA 397


>gi|1711654|sp|P52833|SYT_PSESY RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|1171431|gb|AAB05013.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. syringae]
          Length = 227

 Score =  213 bits (542), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 98/218 (44%), Positives = 144/218 (66%), Gaps = 12/218 (5%)

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I +KLSTRPEKRVGSD LWD AE+ +   LD+            +  GEGAFYGPK E+ 
Sbjct: 2   IELKLSTRPEKRVGSDELWDRAESALASALDSAGQPYD------LQPGEGAFYGPKIEFS 55

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LKD +GR WQCGT+Q+DFNLP R +A YV+  + + +PVM+HRA+ GS ERFIGI+IE++
Sbjct: 56  LKDCLGRVWQCGTLQLDFNLPIRLSAEYVSEDNSRKNPVMLHRAILGSFERFIGILIEHY 115

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
           +G  P WL+P QA++  IT    ++A E+   L       ++D RNE I +KIREH++ K
Sbjct: 116 EGAFPAWLAPTQAVIMNITDKQADFALEVEKTLAESGFRAKSDLRNEKIGFKIREHTLLK 175

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
           +P +++ GD+E   +++ +R      T++ + L ++P+
Sbjct: 176 VPYLLVIGDREVEMQTVAVR------TREGADLGSMPV 207


>gi|290981498|ref|XP_002673467.1| predicted protein [Naegleria gruberi]
 gi|284087051|gb|EFC40723.1| predicted protein [Naegleria gruberi]
          Length = 670

 Score =  213 bits (541), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 176/640 (27%), Positives = 310/640 (48%), Gaps = 47/640 (7%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           +I +T     +K      +   +A  +S   +   +   INGK+ D++  +  +G +E  
Sbjct: 30  EITITIDKDVVKGKAFETSPYKIASDLSNDQSMDHLIAKINGKLWDMNRELEGDGRLEFC 89

Query: 63  TP-EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIED-----GFYY-DFDKE--QP 113
           +   D     V + S A ++  AV+ ++ +  V+ G ++ED     GF+Y +F  E  + 
Sbjct: 90  SDWNDLEVRRVFKRSSAFVLGAAVEQVF-KCLVSGGAVLEDDYGKGGFFYENFMDEVVRN 148

Query: 114 FSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVT 172
            S ++ ++I+K++++II    PF +  +   +A ELF   K  +K+E+L E     + + 
Sbjct: 149 SSINDHSKIKKEIEKIIEEKHPFERLIVRKYEALELFAGNK--FKIELLNEKFKDDDFLC 206

Query: 173 LYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELT 232
           +YR G + D   GPH+  TGQ+  F     ++   +  D+ R +L R YG ++ T Q   
Sbjct: 207 VYRCGCFIDTSVGPHLLHTGQIASF---EIISNTRFLSDTKREIL-RFYGISFPTVQLKE 262

Query: 233 QYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDY 291
           ++    ++ +  DH+K+ ++ +L+       G++     G +I  ++ S +R    +  +
Sbjct: 263 EWKIMTQKLKLCDHKKVGKDQELWFFHPHAPGMVSLLPHGKRICNSVQSQLREAYWRYGF 322

Query: 292 EEINTPQVLDQHLWQ-QSGH----WDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA 346
            E+ +P VL++ LW  QSG     W  Y    FA++       D   + LKP N P H  
Sbjct: 323 AEVQSPIVLNKDLWYYQSGSRNQWWQQYN---FALEI------DKEYYILKPYNKPIHCI 373

Query: 347 VFNHGLKSYRELPVRLAEFGSVY-RNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           ++ +  +SYR+LP+R  EFGSV+  N     L+G  R+R F +D++ +FC  +Q   E L
Sbjct: 374 MYRNKSRSYRDLPIRYVEFGSVFPDNIKPFRLNG--RLRSFQKDESTIFCQSDQTKKEVL 431

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNS-SQDRIN 464
               ++ S+Y  FGFE  +V  ST+P    G +  W   E I++  L ++ +   +D   
Sbjct: 432 NCLQMMGSVYNKFGFEFKIV-FSTKPVSFYGDNLEWIKLEGILETALKSLGHEWERDE-- 488

Query: 465 TGVLLGEGAFYGPKFEYILKDAIGR-DWQCGTIQVDFNLPSRFNAFYVNS-HSEKCHPVM 522
                G     GP+ E+ + D + R  + CG IQ+D   P  FN  Y +S +S +  P+ 
Sbjct: 489 -----GGAPSLGPRIEFYVSDNLKRFIYLCGIIQMDLMTPRFFNLTYTSSDNSAESKPIC 543

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSI 582
           I   +  + E F+ +  E + G  P WLSP QAI+  I     EYA  + + +      +
Sbjct: 544 ISSTILNNTETFMALSAERYGGKWPFWLSPRQAIIIPICEKCSEYANNVKDRIHQAGYYV 603

Query: 583 ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           + D    TI  KIR   + +   I+I G  E     + +R
Sbjct: 604 DVDMSFHTIEKKIRNAHLAQYNYILIIGVSEMETDCVNVR 643


>gi|307328733|ref|ZP_07607905.1| threonyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113]
 gi|306885682|gb|EFN16696.1| threonyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113]
          Length = 412

 Score =  212 bits (539), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 121/384 (31%), Positives = 195/384 (50%), Gaps = 20/384 (5%)

Query: 245 DHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQ 302
           DHRKL RE+ LF      G+G+ +W   G  +  TL  Y+R  + +  Y  + +P +  +
Sbjct: 3   DHRKLGRELGLFDTDPLIGAGLPYWLPDGATVRHTLEEYIRDAERRAGYRHVYSPVLGKR 62

Query: 303 HLWQQSGHWDSYRANMFA-VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
            L++ SGHW  Y  +MF  ++   + +       L+P  CP H  ++     SYRELP+R
Sbjct: 63  ELYELSGHWSHYSDDMFPPMELGAEQV------VLRPSLCPHHAVIYRSRGHSYRELPLR 116

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AE G +YR+E SG L GL RVR    +DAH+FCT +Q+ +E      +I   Y+  G  
Sbjct: 117 MAELGGMYRSELSGVLGGLTRVRAIQLNDAHIFCTLDQVADEAGAALEMIRRAYEALGMT 176

Query: 422 KIMVKLSTRPE--KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
               +LS      K V +  +W  +  ++  VLD      +       + GE AFYGPK 
Sbjct: 177 PARYRLSLPGPGGKYVAAPEMWRRSTALLTDVLDGSGLPYE------AVEGEAAFYGPKI 230

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +  + D  GR+    T+QVDF+ P +F+  Y+     +  PVM+HR++ GS+ER +  +I
Sbjct: 231 DVQVADGAGRESTLSTVQVDFHQPEQFDLHYIGPDGARHRPVMVHRSIIGSVERAVAHLI 290

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIE-TDFRNETINYKIREH 598
           E   G  P WL+P Q +V  I+ + + +A+ +        L  E       ++  +IRE 
Sbjct: 291 EEHGGAFPAWLAPTQLVVLPISEAELPHAEALVRRCVDLGLRAELAGPERGSLGARIRE- 349

Query: 599 SIKKIPIIIICGDKEASERSIGIR 622
             + +P   + G +EA +  + +R
Sbjct: 350 -ARLVPYQAVVGAREAGDDRVALR 372


>gi|226330398|ref|ZP_03805916.1| hypothetical protein PROPEN_04316 [Proteus penneri ATCC 35198]
 gi|225201193|gb|EEG83547.1| hypothetical protein PROPEN_04316 [Proteus penneri ATCC 35198]
          Length = 238

 Score =  211 bits (538), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 96/203 (47%), Positives = 132/203 (65%), Gaps = 6/203 (2%)

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
            +KI+VKLSTRPEKR+G DALWD AE       D  K  + + I      GEGAFYGPK 
Sbjct: 9   LKKIVVKLSTRPEKRIGEDALWDIAEA------DLAKALTDNNIEFEYQPGEGAFYGPKI 62

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           E+ L D + R WQCGT+Q+DF+LP R  A YV  ++E+  PVM+HRAV GS+ERFIGI+ 
Sbjct: 63  EFTLYDCLDRAWQCGTVQLDFSLPGRLGASYVAENNERKVPVMLHRAVLGSLERFIGILT 122

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E + G  P WL+P Q +V  IT    +Y Q++   L+   +  + D RNE I +KIREH+
Sbjct: 123 EEYAGFFPTWLAPQQVVVMNITDGQADYVQKLVKELQDAGIRAKADLRNEKIGFKIREHT 182

Query: 600 IKKIPIIIICGDKEASERSIGIR 622
           ++++P +++CGDKE     + +R
Sbjct: 183 LRRVPYMLVCGDKEVESGKVAVR 205


>gi|188590702|ref|YP_001920953.1| threonyl-tRNA synthetase 1 [Clostridium botulinum E3 str. Alaska
           E43]
 gi|188500983|gb|ACD54119.1| threonyl-tRNA synthetase 1 [Clostridium botulinum E3 str. Alaska
           E43]
          Length = 344

 Score =  211 bits (537), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 104/323 (32%), Positives = 187/323 (57%), Gaps = 15/323 (4%)

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           +++ +GH++ Y  +M+    A D       + ++ + CP H A+F    +SY+ELP+R+ 
Sbjct: 1   MYETTGHYNKYSKDMYPSFYAYD-----EDYVMRSVTCPNHYAIFLQQERSYKELPLRIT 55

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK- 422
           E  ++ R + S  L GL R   FT +DAH+FC+++ +  E LKI + I  +   FG    
Sbjct: 56  EMSTLIRKDRSSELSGLYRTNTFTLNDAHIFCSQDNIELEFLKIIDFIKCVNDKFGISSH 115

Query: 423 IMVKLSTRP---EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           +  +LS      +K + +++LW  +ENI++ +L+      +  ++  +   +  FYGPK 
Sbjct: 116 VRYRLSFSDFSNDKYIKNESLWKKSENILESILN------KSDLDFFISKDKACFYGPKL 169

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           + ++++  G+++   T+Q+DF LP +FN +++N++ EK  PV+IHRA+  SIER I  + 
Sbjct: 170 DVLIENYNGKEYILTTVQLDFILPGKFNVYFINNNFEKEQPVVIHRALPFSIERTIAFLT 229

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E ++G  P WL+P Q ++   T   ++Y+Q+I   LK   + IE D R+   N KI++ +
Sbjct: 230 EYYQGIFPFWLAPEQVVIIPTTLDNIKYSQQIEYHLKEIDIRIECDLRDTRFNKKIKQAT 289

Query: 600 IKKIPIIIICGDKEASERSIGIR 622
           + + P I+I GDKE+    + IR
Sbjct: 290 LNRTPYIVIVGDKESKNNMVTIR 312


>gi|300790769|ref|YP_003771060.1| threonyl-tRNA synthetase [Amycolatopsis mediterranei U32]
 gi|299800283|gb|ADJ50658.1| threonyl-tRNA synthetase [Amycolatopsis mediterranei U32]
          Length = 390

 Score =  211 bits (536), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 123/380 (32%), Positives = 191/380 (50%), Gaps = 20/380 (5%)

Query: 245 DHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           DHRKL RE+ LF      G+G+ +W   G  +  +L  Y+R  + +  Y+ +++P +  +
Sbjct: 3   DHRKLGRELGLFGTDPLIGAGLPYWLPDGAIVRHSLEEYVRNLERRAGYQHVHSPVLGKR 62

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            L++ SGHW  YR  M+                L+P  CP H  ++    +SYRELP+R+
Sbjct: 63  ELYEISGHWSHYRDEMYPPMDVGGE-----QLVLRPSLCPHHALIYRSRGRSYRELPLRM 117

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AE G +YR+E SG L GL RVR    +DAHVFCT +Q+  E      LI   Y   G   
Sbjct: 118 AEIGGMYRSELSGVLGGLSRVRAIQLNDAHVFCTLDQVEAEAAAALALIRRAYDALGISP 177

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
              +LS            W  A  I++ VLD +   + +        GE AFYGPK +  
Sbjct: 178 ARYRLSLPGPGGKYVPGNWAGAVEILRSVLDDLPYDAAE--------GEAAFYGPKIDVQ 229

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           + D  GR+    T+QVDF+ P+RF   YV +   K  PVM+HR++ GS+ER +  +IE  
Sbjct: 230 IADGAGRESTLSTVQVDFHQPARFGLEYVGADGAKHRPVMVHRSIIGSVERAVAQLIEVH 289

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P+Q  +  +++  V YA+E+          I ++    ++  +IR+  +  
Sbjct: 290 GGAFPAWLAPVQLRLLPVSAVEVPYAREVLERCGDVRAEIASE---GSLGARIRDGRL-- 344

Query: 603 IPIIIICGDKEASERSIGIR 622
           +P   + G  E +   + +R
Sbjct: 345 VPYQAVIGPAEVAAGQLSVR 364


>gi|332967807|gb|EGK06908.1| threonine--tRNA ligase [Desmospora sp. 8437]
          Length = 295

 Score =  210 bits (534), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 110/306 (35%), Positives = 183/306 (59%), Gaps = 17/306 (5%)

Query: 248 KLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLW 305
           KL +E+ +F ++++ G G+  W   G  I + +  Y+  K +   Y+ + TP +    L+
Sbjct: 1   KLGKELKIFTLSQEVGQGLPLWLPNGATIRRIIERYIIDKEERLGYQHVYTPHLASVELY 60

Query: 306 QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEF 365
           + SGHWD Y  +M+     D+         L+PMNCP H+ ++ + LKSYR LPVR+AE 
Sbjct: 61  KISGHWDHYHEDMYPPMKMDN-----EELVLRPMNCPHHMMIYKNDLKSYRNLPVRIAEL 115

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
           G ++R+E SG+L GL RVR  T +DAH+FC  +Q+ +E +++  LI  +Y+DFG +    
Sbjct: 116 GMMHRHEMSGALSGLQRVRAMTLNDAHIFCRPDQIKSEFIRVVQLIEEVYRDFGIKDFWY 175

Query: 426 KLSTR-PE---KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
           +LS R PE   K V +D +W+ ++ +++  +D +     D +      GE AFYGPK + 
Sbjct: 176 RLSYRDPEDKKKYVQNDEMWETSQRMLREAMDEM---GVDYVEAE---GEAAFYGPKLDV 229

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            ++ A+G+D    T+Q+DF+LP++F   Y+    +   PV+IHR + G++ERF+  ++E 
Sbjct: 230 QVQTALGKDETLSTVQMDFHLPNQFGLEYIGEDGQPHRPVVIHRGIVGTMERFVAFLLEY 289

Query: 542 FKGNLP 547
           +KG LP
Sbjct: 290 YKGVLP 295


>gi|256394768|ref|YP_003116332.1| threonyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
 gi|256360994|gb|ACU74491.1| threonyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
          Length = 409

 Score =  209 bits (531), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 127/402 (31%), Positives = 201/402 (50%), Gaps = 22/402 (5%)

Query: 243 KRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           + DHR+L RE+ LF      G+G+ +W   G  +   +  Y+R  + +  Y+ + +P + 
Sbjct: 5   QHDHRRLGRELGLFDTDPLIGAGLPYWLPDGAVVRHAVEEYIRSVERRAGYQHVYSPVLG 64

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDL--RTFALKPMNCPGHVAVFNHGLKSYREL 358
            + L++ SGHW  Y  +MF          DL      L+P  CP H  ++     SYREL
Sbjct: 65  KRELYEISGHWSHYSEDMF-------PPMDLGAEQMVLRPSLCPTHALIYRSRAHSYREL 117

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R+E SG+L GL RVR  T +DAH+FCT EQ+  E      LI   Y+  
Sbjct: 118 PLRMAEIGGMFRSEMSGALGGLTRVRAITLNDAHIFCTLEQVAQEAQDALKLIRDAYEAL 177

Query: 419 GFEKIMVKLSTRPE--KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           G E   ++LS      K V    +W  A  +++ VLD         +      GE AFYG
Sbjct: 178 GIEAARIRLSLPGPGGKYVDKPQMWQRATAMLREVLDA------SGLAYEEAEGEAAFYG 231

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK +  + D  GR+    T+Q+DF+ P +F   Y+ +   +  PVM+HR++ GS+ER + 
Sbjct: 232 PKIDIQIADPAGRESTLSTVQIDFHQPEQFALEYIGADGARHRPVMVHRSIVGSMERVVA 291

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIE-TDFRNETINYKI 595
            +IE   G  P WL+P+Q  V  +       A+   +L     L  E  D    ++  +I
Sbjct: 292 HLIEQHGGAFPAWLAPVQVAVLPVGEDEAGAARAFHDLCLDLGLRSELMDPERGSLGARI 351

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
           RE  +  +P   + G +EA+  ++ IR       + +S+ +A
Sbjct: 352 REARL--VPYQAVIGGREAAADAVAIRLRDGRKLEPMSVAEA 391


>gi|213026905|ref|ZP_03341352.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 168

 Score =  209 bits (531), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 101/183 (55%), Positives = 130/183 (71%), Gaps = 17/183 (9%)

Query: 312 DSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRN 371
           D+Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+AEFGS +RN
Sbjct: 1   DNYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRN 54

Query: 372 EPSGSLHGLMRVRGFTQDDAHVFCTKEQM--FNECLKIHNLIISIYKDFGFEKIMVKLST 429
           EPSG+LHGLMRVRGFTQDDAH+FCT+EQ+   N C++   ++  +Y  FGFEKI+VKLST
Sbjct: 55  EPSGALHGLMRVRGFTQDDAHIFCTEEQIHEVNACIR---MVYDMYSTFGFEKIVVKLST 111

Query: 430 RPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGR 489
           RP+KR+GSD +WD AE  +   L+      ++ I     LGEGAFYGPK E+ L D + R
Sbjct: 112 RPDKRIGSDEMWDRAEADLAVALE------ENNIPFEYQLGEGAFYGPKIEFTLYDCLDR 165

Query: 490 DWQ 492
            WQ
Sbjct: 166 AWQ 168


>gi|155061091|gb|ABS90481.1| threonyl-tRNA synthetase [Streptomyces albus]
          Length = 439

 Score =  208 bits (530), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 122/390 (31%), Positives = 196/390 (50%), Gaps = 20/390 (5%)

Query: 239 EESEKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINT 296
           +E+   DHR+L RE++LF      G+G+ +W   G  +   L  Y+R  + +  Y  + +
Sbjct: 31  KETTMHDHRRLGRELELFDTDPLIGAGLPYWLPDGAAVRHALEEYVRAAERRAGYRHVYS 90

Query: 297 PQVLDQHLWQQSGHWDSYRANMFA-VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P +  + L++ SGHW  Y  +MF  ++   + +       L+P  CP H  ++    +S+
Sbjct: 91  PVLGKRELYEISGHWSHYSEDMFPPMEVGGEQM------LLRPSLCPHHALIYRSRPRSH 144

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP+R+AE G +YR E SG L GL RVR    +DAHVFCT +Q   E      +I   Y
Sbjct: 145 RELPLRMAELGGMYRAELSGVLGGLSRVRSIHLNDAHVFCTLDQAAGEARAALEMIGRAY 204

Query: 416 KDFGFEKIMVKLSTRPE--KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           +  G      +LS      K V     W  +  ++  VLD    + +       + GE A
Sbjct: 205 EALGIRPARFRLSLPGPGGKYVADPEKWRRSTALLTEVLDASGVAYE------AVEGEAA 258

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  + D  GR+    T+QVDF+ P RF   Y+ +      PVMIHR+V GS+ER
Sbjct: 259 FYGPKIDVQIADGQGRESTLSTVQVDFHQPERFGLRYIGADGAGHRPVMIHRSVIGSVER 318

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIE-TDFRNETIN 592
            +  ++E   G  P WL+P+Q  V  +T + V   +       +  L  E  D    ++ 
Sbjct: 319 AVAHLVEEHGGAFPAWLAPVQIAVLPVTGAQVPDGEAFLRRCAALGLRAEQADPGRGSLG 378

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIR 622
            +IR  + + +P  ++ G++EA++  + +R
Sbjct: 379 ARIR--AARLVPYQVVIGEEEAADGRVALR 406


>gi|134100182|ref|YP_001105843.1| putative threonyl-tRNA synthetase [Saccharopolyspora erythraea NRRL
           2338]
 gi|291006599|ref|ZP_06564572.1| putative threonyl-tRNA synthetase [Saccharopolyspora erythraea NRRL
           2338]
 gi|133912805|emb|CAM02918.1| putative threonyl-tRNA synthetase [Saccharopolyspora erythraea NRRL
           2338]
          Length = 405

 Score =  207 bits (527), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 116/332 (34%), Positives = 177/332 (53%), Gaps = 17/332 (5%)

Query: 245 DHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQ 302
           DHRKL RE+ LF      G+G+ +W   G  +  TL  Y+R  + +  Y+ + +P +  +
Sbjct: 3   DHRKLGRELGLFDSDPLIGAGLPYWLPDGALVRHTLEEYIRDAERRAGYQHVYSPVLGKR 62

Query: 303 HLWQQSGHWDSYRANMFA-VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
            L++ SGHWD YR +MF  ++   + +       L+P  CP H  ++     SYRELP+R
Sbjct: 63  ELYEISGHWDHYRDDMFPPMRLGAEQV------VLRPSLCPHHALIYRSRSHSYRELPLR 116

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AE G +YR+E SG L GL RVR    +DAH+FCT EQ+  E      LI   Y   G  
Sbjct: 117 MAELGGMYRSELSGVLGGLTRVRAIHLNDAHIFCTLEQVAEEAAAALELIRRAYDALGIR 176

Query: 422 KIMVKLSTRPE--KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
               +LS      K V +  +W  A  ++  VLD      +       + GE AFYGPK 
Sbjct: 177 AARYRLSLPGSGGKYVAAPRMWQRAAALLVDVLDRCGVVYES------VEGEAAFYGPKI 230

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +  + D+ GR+    T+QVDF+ P RF+  Y+    ++  PVM+HR++ GS+ER +  ++
Sbjct: 231 DVQVADSAGREATLSTVQVDFHQPDRFDLHYIGGDGDRHRPVMVHRSIIGSVERAVAHLV 290

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
           E   G  P WL+P Q +V  ++ +  E A+ +
Sbjct: 291 ELHGGAFPAWLAPTQLVVLPVSDAEAEQARAL 322


>gi|297850190|ref|XP_002892976.1| hypothetical protein ARALYDRAFT_472010 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338818|gb|EFH69235.1| hypothetical protein ARALYDRAFT_472010 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 458

 Score =  206 bits (525), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 109/274 (39%), Positives = 160/274 (58%), Gaps = 7/274 (2%)

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
           NH      ELP+R+A+FG ++RNE SG+L G+ RVR F QDDAH+FC  +Q+  E   + 
Sbjct: 161 NHFPNIEAELPIRMADFGVLHRNEESGALSGMTRVRRFVQDDAHIFCRVDQVGEEVKGVL 220

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
           + I  +YK FGF    +KLST  +K +G    WD AE  ++  LD         IN G  
Sbjct: 221 DFIDYVYKIFGF-TYELKLSTPEKKYIGDLETWDKAEKDLEKALDNFGKPWV--INKG-- 275

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
             +GAFYGPK +  + DA+ R +QC T+Q+DF LP+ F   Y+   +EK  PVMIHRAV 
Sbjct: 276 --DGAFYGPKIDITVSDAMKRKFQCATLQLDFQLPACFKLKYITKKNEKERPVMIHRAVL 333

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRN 588
           GSIER   I++E++KG  P WLSP QAIV +++     YA+++   ++     ++ D  +
Sbjct: 334 GSIERMFAILLEHYKGIWPFWLSPRQAIVCSLSEDYSSYAKQVQKQIQEAGYYVDIDESD 393

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
            +I  K+ +        I++ G KEA+   + +R
Sbjct: 394 RSICKKVADARAAPYNYILVVGQKEATTGQVTVR 427


>gi|302528111|ref|ZP_07280453.1| threonyl-tRNA synthetase [Streptomyces sp. AA4]
 gi|302437006|gb|EFL08822.1| threonyl-tRNA synthetase [Streptomyces sp. AA4]
          Length = 415

 Score =  206 bits (525), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 119/334 (35%), Positives = 172/334 (51%), Gaps = 25/334 (7%)

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAED---GSGVIFWHRKGWKIFQTLISYMRR-KIKDD 290
           L F EE+   DHRKL RE+ LF    D   G+G+ +    G  I   L  Y+R  + +  
Sbjct: 6   LAFREETAMPDHRKLGRELGLF--GSDPLIGAGLPYLLPDGAAIRHVLEEYVREVERRAG 63

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFA-VKCADDTIKDLRTFALKPMNCPGHVAVFN 349
           Y+ +++P +  + L++ SGHW  YR +MF  +    + +       L+P  CP H  ++ 
Sbjct: 64  YQHVSSPVLGKRELYELSGHWAHYREDMFPPMDLGGEQV------VLRPSLCPHHALIYR 117

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
               S+RELP+RLAE G +YR E SG L GL RVR    +DAH+FC  EQ+  E      
Sbjct: 118 SRAHSHRELPLRLAELGGMYRAELSGVLGGLSRVRAIQLNDAHIFCLPEQVGAEVRGALE 177

Query: 410 LIISIYKDFGFEKIMVKLSTRPEKR---VGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           LI  + +D G +    +LS  P+ R    G+   WD A  ++   LD I+          
Sbjct: 178 LIRRVCQDLGLKPARYRLSL-PDNRGKYAGAAEAWDRAAEVLVEALDGIEYERGP----- 231

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
              GE AFYGPK +  L D+ GR+    T+Q+D + P +F   YV        PV++HRA
Sbjct: 232 ---GEAAFYGPKIDVQLADSSGRESTLSTVQIDLHQPEQFGLEYVGPDGRAHRPVLVHRA 288

Query: 527 VFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTI 560
           V GS+ER +  +IE   G  P WL+P+Q  V  +
Sbjct: 289 VLGSLERVLAQLIEEHGGAFPPWLAPVQVAVLPV 322


>gi|156937646|ref|YP_001435442.1| Ser-tRNA(Thr) hydrolase [Ignicoccus hospitalis KIN4/I]
 gi|156566630|gb|ABU82035.1| Ser-tRNA(Thr) hydrolase [Ignicoccus hospitalis KIN4/I]
          Length = 462

 Score =  206 bits (524), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 121/379 (31%), Positives = 205/379 (54%), Gaps = 34/379 (8%)

Query: 272 GWKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
           G  + +T + ++  K   +  Y  + TP +    L++ +GH   Y+ NMF +    D   
Sbjct: 46  GGGVLRTALKHVLHKYHARKGYYVVETPIIARTTLYELTGHLKFYKENMFLLNIEGDE-- 103

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYR---ELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
               +A+KPMNCP HV +F + L+ Y    +LP ++ E G+V+R E +G+L GL+RVR F
Sbjct: 104 ----YAIKPMNCPFHVLIFMNLLQKYSSKVKLPFKIFETGTVHRYEIAGALRGLLRVRAF 159

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF-----EKIMVKLSTRPEKRVGSD--- 438
           TQDDAH+F  +E +    +++  ++  +Y+   +     E + ++LS   + ++G +   
Sbjct: 160 TQDDAHLFSPEEHVEASLMEVFEMMKDVYEKLFYIPVTSETVKLRLSLSDKSKIGEEFMG 219

Query: 439 --ALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
              +W+ AE  +  V + +K      I      GE AFYGPK + ++ +  G++WQ GT 
Sbjct: 220 EPEMWEFAEEKLFKVAEEVKRKYG--IEFFAEEGEAAFYGPKLDVVVYEEGGKEWQIGTA 277

Query: 497 QVDFNLPSRF--NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQ 554
           Q DFNLP RF  +     +H    +  MIHRA+ GS+ERF+GI +E FKG LP  L+P+Q
Sbjct: 278 QFDFNLPKRFKLHELIKETHGLDANLYMIHRALLGSLERFLGIYLEMFKGRLPFSLAPLQ 337

Query: 555 AIVTTITSS-------AVEYAQEIANLLKSHHLSIETDFRNET-INYKIRE-HSIKKIPI 605
            +V  IT+          E + ++ N LK + + + +    +T ++  +R+  S  K P+
Sbjct: 338 VLVIEITTGNEEVDKKIKELSSKVVNSLKENEIRVASLTSTKTHLSRDVRKVESTVKPPL 397

Query: 606 IIICGDKEASERSIGIRRF 624
           I+  G +EA E ++  R +
Sbjct: 398 ILYIGGREAEESAVVARPY 416


>gi|117164481|emb|CAJ88027.1| putative threonyl tRNA synthetase [Streptomyces ambofaciens ATCC
           23877]
          Length = 411

 Score =  206 bits (524), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 121/390 (31%), Positives = 196/390 (50%), Gaps = 24/390 (6%)

Query: 241 SEKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           + + DHRKL RE+ LF      G+G+ +W   G  +  +L  Y+R  + +  Y  + +P 
Sbjct: 2   ATQHDHRKLGRELGLFDTDPLIGAGLPYWLPDGAAVRYSLEEYIRAAERRAGYRHVYSPV 61

Query: 299 VLDQHLWQQSGHWDSYRANMFA-VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           +  + L++ SGHW  Y  +MF  +    + +       L+P  CP H  ++     SYRE
Sbjct: 62  LGKRELYEISGHWAHYSDDMFPPMDLGGEQV------VLRPSLCPHHAVIYRSRSHSYRE 115

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AE G +YR+E SG L GL RVR    +DAH+FCT +Q+  E      +I   Y+ 
Sbjct: 116 LPLRMAELGGMYRSELSGVLGGLTRVRAIQLNDAHIFCTLDQVAGEAQAALEMIRQAYEA 175

Query: 418 FGFEKIMVKLS--TRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
            G      +LS      K V     W  +  ++  VLD      +  +      GE AFY
Sbjct: 176 LGITPTRYRLSLPGPGAKYVADPEKWQRSTALLTDVLD------RSGLPYEAAQGEAAFY 229

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  + D  GR+    T+QVDF+ P RF+  Y+ +   K  PVM+HR++ GS+ER +
Sbjct: 230 GPKIDVQVTDGAGRESTLSTVQVDFHQPERFDLHYIGADGGKHRPVMVHRSIIGSVERAV 289

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE---TIN 592
             +IE   G  P WL+P Q +V  I+ +  E+    A   ++  L +  +       ++ 
Sbjct: 290 AHLIEQHGGAFPAWLAPTQLVVLPISDT--EWPNAAALAERAAGLGLRAEIAGPERGSLG 347

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIR 622
            ++RE   + +P   + G +EA++  + +R
Sbjct: 348 ARVRE--ARLVPYQAVIGAREAADDHVALR 375


>gi|255019069|ref|ZP_05291195.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL F2-515]
          Length = 188

 Score =  205 bits (522), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 94/188 (50%), Positives = 139/188 (73%), Gaps = 2/188 (1%)

Query: 39  VAVAINGKVCDLSDPVRE-GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIG 97
           +A  +NG++ DL  P+ E G+IEI+TP+   +L ++RHS AH+MA+A++ ++P+V+  +G
Sbjct: 1   LAGKLNGELLDLVTPIHEDGAIEIVTPDHEDALGILRHSTAHLMAQALKRLYPDVKFGVG 60

Query: 98  PIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAY 157
           P IE GFYYD D E   S + L +IEK+MQ+I+  + P  ++ +S E+A + F++  + Y
Sbjct: 61  PAIESGFYYDIDTEAVISDESLVEIEKEMQKIVRENVPIEREVVSREEAIKRFKAIGDQY 120

Query: 158 KVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPML 217
           K+E++E+IP  E VT+Y QGE+FDLCRG HV STG++ + FKL+ VAGAYWRGDSN  ML
Sbjct: 121 KLELIEAIPEDETVTIYTQGEFFDLCRGVHVPSTGKI-QVFKLLSVAGAYWRGDSNNKML 179

Query: 218 SRIYGTAW 225
            RIYGTA+
Sbjct: 180 QRIYGTAF 187


>gi|289746410|ref|ZP_06505788.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987]
 gi|289686938|gb|EFD54426.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987]
          Length = 337

 Score =  205 bits (521), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 121/330 (36%), Positives = 184/330 (55%), Gaps = 30/330 (9%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVA--INGKVCDLS-DPVREGS 58
           PS  ++  P G+     V   G      + R     A+ V    +G + DLS  P  +  
Sbjct: 16  PSQARIRVPAGTTAATAVGEAG------LPRRGTPDAIVVVRDADGNLRDLSWVPDVDTD 69

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           I  +        +VIRHS AH++A+AVQ ++P+ ++ IGP I DGFYYDFD  +PF+ ++
Sbjct: 70  ITPVAANTDDGRSVIRHSTAHVLAQAVQELFPQAKLGIGPPITDGFYYDFDVPEPFTPED 129

Query: 119 LAQIEKKMQEIIARDSPFLKQ-YLSHEKARELFESKKEAYKVEILESIPAK--------E 169
           LA +EK+M++I+     F ++ Y S E+AR   E   E YK+E+++             +
Sbjct: 130 LAALEKRMRQIVKEGQLFDRRVYESTEQARA--ELANEPYKLELVDDKSGDAEIMEVGGD 187

Query: 170 NVTLY-------RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYG 222
            +T Y       R+  W DLCRGPH+ +T  +   FKL + + AYWRGD     L RIYG
Sbjct: 188 ELTAYDNLNPRTRERVWGDLCRGPHIPTTKHIPA-FKLTRSSAAYWRGDQKNASLQRIYG 246

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLIS 281
           TAW +Q+ L ++L F+EE+++RDHRKL  E+DLF   ++ GSG+  +H KG  + + L  
Sbjct: 247 TAWESQEALDRHLEFIEEAQRRDHRKLGVELDLFSFPDEIGSGLAVFHPKGGIVRRELED 306

Query: 282 YMRRK-IKDDYEEINTPQVLDQHLWQQSGH 310
           Y RRK  +  Y+ +N+P +    L+  SGH
Sbjct: 307 YSRRKHTEAGYQFVNSPHITKAQLFHTSGH 336


>gi|215404566|ref|ZP_03416747.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987]
          Length = 342

 Score =  204 bits (520), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 121/330 (36%), Positives = 184/330 (55%), Gaps = 30/330 (9%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVA--INGKVCDLS-DPVREGS 58
           PS  ++  P G+     V   G      + R     A+ V    +G + DLS  P  +  
Sbjct: 21  PSQARIRVPAGTTAATAVGEAG------LPRRGTPDAIVVVRDADGNLRDLSWVPDVDTD 74

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           I  +        +VIRHS AH++A+AVQ ++P+ ++ IGP I DGFYYDFD  +PF+ ++
Sbjct: 75  ITPVAANTDDGRSVIRHSTAHVLAQAVQELFPQAKLGIGPPITDGFYYDFDVPEPFTPED 134

Query: 119 LAQIEKKMQEIIARDSPFLKQ-YLSHEKARELFESKKEAYKVEILESIPAK--------E 169
           LA +EK+M++I+     F ++ Y S E+AR   E   E YK+E+++             +
Sbjct: 135 LAALEKRMRQIVKEGQLFDRRVYESTEQARA--ELANEPYKLELVDDKSGDAEIMEVGGD 192

Query: 170 NVTLY-------RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYG 222
            +T Y       R+  W DLCRGPH+ +T  +   FKL + + AYWRGD     L RIYG
Sbjct: 193 ELTAYDNLNPRTRERVWGDLCRGPHIPTTKHIPA-FKLTRSSAAYWRGDQKNASLQRIYG 251

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLIS 281
           TAW +Q+ L ++L F+EE+++RDHRKL  E+DLF   ++ GSG+  +H KG  + + L  
Sbjct: 252 TAWESQEALDRHLEFIEEAQRRDHRKLGVELDLFSFPDEIGSGLAVFHPKGGIVRRELED 311

Query: 282 YMRRK-IKDDYEEINTPQVLDQHLWQQSGH 310
           Y RRK  +  Y+ +N+P +    L+  SGH
Sbjct: 312 YSRRKHTEAGYQFVNSPHITKAQLFHTSGH 341


>gi|326331281|ref|ZP_08197573.1| threonine--tRNA ligase [Nocardioidaceae bacterium Broad-1]
 gi|325950914|gb|EGD42962.1| threonine--tRNA ligase [Nocardioidaceae bacterium Broad-1]
          Length = 411

 Score =  204 bits (518), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 129/403 (32%), Positives = 197/403 (48%), Gaps = 20/403 (4%)

Query: 245 DHRKLAREMDLFHIAED---GSGVIFWHRKGWKIF---QTLISYMRRKIKDDYEEINTPQ 298
           DHR L R++ +F  A D   GSG+  W   G  +F   + L + + R   D    + TP 
Sbjct: 4   DHRDLNRDLAIF--ATDPLAGSGLPLWLPDGAVVFAELEQLAADLARA--DGCVPVKTPV 59

Query: 299 VLDQHLWQQSGHWDSYRANMFA-VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           +  + L+++SGHW  +  +MF  +     +  +     L+P NCP H  V+     SYRE
Sbjct: 60  LGKRALFERSGHWAKFADDMFPPMAVGSGSAGEEDDLVLRPANCPHHALVYRARPHSYRE 119

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LPVRL E   ++R E SG L GL RVR    DD HVFC  +Q+  E  K  +  +     
Sbjct: 120 LPVRLHELAPMFRAERSGVLSGLSRVRQINLDDTHVFCRPDQVAEEAAKALSSALRAQDI 179

Query: 418 FGFEKIMVKLSTRPEKR--VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
            G     V+LS R      +GS   W  AE  ++      K +S+  +      GE AFY
Sbjct: 180 LGLRVDYVRLSLRDSSPSYLGSAEQWHGAEGALR------KAASEAGVEVVEAPGEAAFY 233

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  + D  G +    T+QVDFN P RF+  Y  +   +   VM+HR   GS+ER  
Sbjct: 234 GPKLDLQVVDPRGHEETIATVQVDFNQPERFDLTYDAADGSRQRVVMVHRGTVGSMERVT 293

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
             ++E ++G LPLWL+P+Q  V  ++SS    A+ + + L +  L    D    ++  +I
Sbjct: 294 AAVLERYQGRLPLWLAPVQLAVLPVSSSQDRAARALVDALVAEGLRPRLDPEG-SLGARI 352

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           RE   ++ P+I + G  EA    + +R   +   ++V   D +
Sbjct: 353 RESRRRREPLIAVIGAVEAEAGEVQVRDVAAGVERRVGAADLV 395


>gi|311273541|ref|XP_003133917.1| PREDICTED: threonyl-tRNA synthetase, cytoplasmic-like [Sus scrofa]
          Length = 384

 Score =  204 bits (518), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 117/316 (37%), Positives = 175/316 (55%), Gaps = 13/316 (4%)

Query: 32  RSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWP 90
           + LA   V   +N  V DL  P+ E  ++E++  ED  + AV  HS AHIM EA++ ++ 
Sbjct: 70  QGLADNTVVAKVNKVVWDLDRPLEEDCTLELLKFEDEEAQAVYWHSSAHIMGEAMERVYG 129

Query: 91  EVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKAREL 149
              +  GP IE+GFYYD + +E   SS++ + +E   ++II     F +  +  E   E+
Sbjct: 130 GC-LCYGPPIENGFYYDMYLEEGGVSSNDFSSLEALCKKIIKEKQAFERLEIKKETLLEM 188

Query: 150 FESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWR 209
           F+  K  +K  IL         T+YR G   DLCRGPHVR TG++K   K+ K +  YW 
Sbjct: 189 FKYNK--FKCRILNEKVNTPTTTVYRCGPLIDLCRGPHVRHTGKIKTL-KIHKNSSTYWE 245

Query: 210 GDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWH 269
           G ++   L RIYG ++   + L ++  F EE++ RDHRK+ R+ +L+   E   G  F+ 
Sbjct: 246 GKADMETLQRIYGISFPDPKMLKEWEKFQEEAKNRDHRKIGRDQELYFFHELSPGSCFFL 305

Query: 270 RKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTI 328
            KG  I+ TLI ++R +  K  ++E+ TP + +  LW  SGHW  Y  NMF+ +   +  
Sbjct: 306 PKGAYIYNTLIDFIRSEYRKRGFQEVVTPNIYNSRLWVTSGHWQHYSDNMFSFEVEKE-- 363

Query: 329 KDLRTFALKPMNCPGH 344
                FALKPMNCPGH
Sbjct: 364 ----LFALKPMNCPGH 375


>gi|118102209|ref|XP_001233746.1| PREDICTED: hypothetical protein [Gallus gallus]
          Length = 510

 Score =  200 bits (508), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 111/327 (33%), Positives = 175/327 (53%), Gaps = 12/327 (3%)

Query: 76  SCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQIEKKMQEIIARDS 134
           S + ++  AVQ  +    +      EDGF+ D    ++     EL  +E+          
Sbjct: 96  SSSFVLGAAVQQFY-GATICSTVTTEDGFFCDAHMGDRTVQRSELPVLEESCMAFARSQH 154

Query: 135 PFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQV 194
            F +   + E+  ELF  K  +++++ +E        T+YR G    LCRGP +  TG +
Sbjct: 155 CFERLEATREELLELF--KHNSFQLQRIEEEVMTPTATVYRCGPLLQLCRGPLLPHTGLI 212

Query: 195 KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMD 254
               +++  + A+W+G S R  L RI   A+ + QEL  +    + +  RDHR++ +E +
Sbjct: 213 GAL-RVLTGSAAFWQGPSGRLSLQRIAAIAFPSTQELQAWQQAQDAAALRDHRRIGKEQE 271

Query: 255 LFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDS 313
           LF       G  F+  +G  I+ TL+ ++R + +   + E+ TP +    LW+ SGHW  
Sbjct: 272 LFFFHALSPGSCFFLPRGAHIYNTLVDFIRSEYQVRGFNEVVTPNIFSPRLWELSGHWQH 331

Query: 314 YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP 373
           Y A+MF+     +T+      +LKPMNCP H  +F H  +S+RELP+RLA+FG ++RNEP
Sbjct: 332 YSAHMFSFTAGTETL------SLKPMNCPAHCLMFAHRPRSWRELPLRLADFGVLHRNEP 385

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQM 400
            GSL GL RVR F Q+DAH+FC  EQ+
Sbjct: 386 PGSLTGLTRVRRFQQEDAHIFCALEQL 412


>gi|196230369|ref|ZP_03129231.1| threonyl-tRNA synthetase [Chthoniobacter flavus Ellin428]
 gi|196225299|gb|EDY19807.1| threonyl-tRNA synthetase [Chthoniobacter flavus Ellin428]
          Length = 692

 Score =  199 bits (507), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 108/299 (36%), Positives = 167/299 (55%), Gaps = 13/299 (4%)

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
           + LK MNCP H  +F    +SYR+LP+RLAE+G+ YR E SG L GLMRVR    +DAH+
Sbjct: 375 YYLKAMNCPHHHKLFAAVPRSYRDLPLRLAEYGTCYRYEQSGELFGLMRVRSMQMNDAHI 434

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG-----SDALWDDAENIM 448
           +CT+EQ  +E   ++ + +  +  FG +K +++ ST    ++G     +  LW   E+++
Sbjct: 435 YCTEEQFESEFRAVNEMYLKYFAIFGIDKYVMRFSTHDPAKLGQKFVDNSELWLKTEDMV 494

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
           +GVL       +  IN   +  E AFYGPK +  +  AIGR++   T QVDF +P+RF  
Sbjct: 495 RGVL------QRTGINFIEVPNEAAFYGPKIDVQVWSAIGREFTIATNQVDFAVPARFGL 548

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA--VE 566
            Y +  +    P+ IHRA  G+ ERF+G +IE++ GN PLWLSP Q  V  I      V 
Sbjct: 549 TYKDRDNTSKTPLCIHRAPLGTHERFVGFLIEHYAGNFPLWLSPEQVRVLPIGDEEPLVN 608

Query: 567 YAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
           YA+ I   L++  +    D  ++ I  KI      K+  +++ G ++    ++ +R  G
Sbjct: 609 YAKAIQAELRAAGVRANLDSSSDPIKAKIASAEQMKVHTMLVLGHRDLEAGNVSVRVHG 667



 Score =  186 bits (471), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 96/263 (36%), Positives = 149/263 (56%), Gaps = 14/263 (5%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           L  +RHS AH++A A+  IWPE Q A GP +E+GFYYD +     S D+  +IE++M++ 
Sbjct: 17  LERLRHSAAHVLATAILRIWPEAQFAAGPPVENGFYYDLEMPHRISPDDFLKIEEEMKKE 76

Query: 130 IARDSPFLKQYLSHEKARELFESKK-----------EAYKVEILESIPAKENVTLYRQGE 178
           I  +  F +  +S ++A  L  S +             +K+  L  IP  E ++LY+ G+
Sbjct: 77  IKANHVFERTAVSRDEAIALANSGRLGGLSERPGNVSKFKIGNLADIPEGEEISLYKNGD 136

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + DLC GPHV  TG +  F +L  VA AY++GD   P L RIYGTA+  + E+  Y   L
Sbjct: 137 FLDLCAGPHVMRTGNIGAF-RLTSVASAYYKGDEKNPQLQRIYGTAFKNKTEMEAYFTML 195

Query: 239 EESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINT 296
           EE++KRDHRKL +E++LF   +D G G+  W  +G  + + L    +  +    Y+ + T
Sbjct: 196 EEAKKRDHRKLGKELELFCFDDDVGPGLPLWLPRGTVLIEELEKLAKETEFAGGYDRVRT 255

Query: 297 PQVLDQHLWQQSGHWDSYRANMF 319
           P +  ++++  SGH   Y  +MF
Sbjct: 256 PVLARENMYLTSGHLPYYAESMF 278


>gi|229030088|ref|ZP_04186151.1| Threonyl-tRNA synthetase [Bacillus cereus AH1271]
 gi|228731210|gb|EEL82129.1| Threonyl-tRNA synthetase [Bacillus cereus AH1271]
          Length = 236

 Score =  199 bits (506), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 93/222 (41%), Positives = 147/222 (66%), Gaps = 8/222 (3%)

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           +YK FGFE   V+LSTRPE  +G D LW+ AE  ++ VL ++    + R+N G    +GA
Sbjct: 7   VYKTFGFE-YEVELSTRPEDSMGDDKLWEQAEASLENVLHSL--DYKYRLNEG----DGA 59

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK ++ +KDA+ R  QCGTIQ+DF +P +F+  Y++  +EK  PV+IHRAV GS++R
Sbjct: 60  FYGPKIDFHIKDALNRSHQCGTIQLDFQMPEKFDLNYIDEKNEKRRPVVIHRAVLGSLDR 119

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETIN 592
           F+ I+IE+F G  P W++P+Q  V  ++++  V+YA+ +A  L    + +E D R E + 
Sbjct: 120 FLAILIEHFGGVFPAWVAPVQVKVIPVSNAVHVQYAEAVAEKLAQAGVRVERDMREEKLG 179

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           YKIRE  ++K+P +++ GDKE    ++ +R++G   ++ V L
Sbjct: 180 YKIREAQMQKVPYVLVIGDKEMENGAVNVRKYGEEKSEVVEL 221


>gi|318061953|ref|ZP_07980674.1| threonyl-tRNA synthetase [Streptomyces sp. SA3_actG]
          Length = 407

 Score =  198 bits (503), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 124/410 (30%), Positives = 199/410 (48%), Gaps = 20/410 (4%)

Query: 245 DHRKLAREMDLFHIAED---GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           DH +L R + L+    D   G+G+ +    G  +   L  Y+R  ++ D Y+ +++P + 
Sbjct: 11  DHHRLGRALGLY--GTDPLLGAGLPYLLPDGASVRHALEEYVRGLEVADGYQHVHSPVLG 68

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            Q L+ +SGHW  YRA+MF              F L+P  CP H  ++    +SYRELP+
Sbjct: 69  KQELYVRSGHWAHYRADMFPPMEVGGE-----HFVLRPSLCPHHALIYRAQARSYRELPL 123

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G ++R EPSG+L GL RVR    +DAH+FC  E +  E      LI + Y+  G 
Sbjct: 124 RIAELGGMFRAEPSGTLGGLTRVRAIHLNDAHLFCAPESLAGEVAGALALIRTAYRALGL 183

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIM-KGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
                +LS       G DA +  AE +  +      +  +   ++     GE AFYGPK 
Sbjct: 184 APSRYRLSL-----PGEDAKYALAEGVWERSAAALAEALAGAGLDWEEERGEAAFYGPKI 238

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +   +DA GR++   T+Q DF+ P+ F   Y  +   +  PVM+HR+V GS+ER +  +I
Sbjct: 239 DVQARDAAGREFTLSTVQADFHQPTAFGLDYRAADGSRPRPVMVHRSVLGSLERVLARLI 298

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIET-DFRNETINYKIREH 598
           E   G  P WL+P+Q  V  +     E A+      ++  L          T+  ++R+ 
Sbjct: 299 EVHGGAFPAWLAPVQVGVVPVGEEQEEAAESFVRRCRAAGLRARRYPAHAGTLAARVRQ- 357

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
             + +P + + G +EA+   + +RR            +A+ +L   S  P
Sbjct: 358 -ARLVPHLAVLGAREAAAGEVALRRRDGERLPARPEAEAVALLVAGSGVP 406


>gi|38048079|gb|AAR09942.1| similar to Drosophila melanogaster CG5353 [Drosophila yakuba]
          Length = 205

 Score =  198 bits (503), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 100/210 (47%), Positives = 134/210 (63%), Gaps = 7/210 (3%)

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           ALKPMNCPGH  +F++  +S+RELP+R+A+FG ++RNE SG+L GL RVR F QDDAH+F
Sbjct: 1   ALKPMNCPGHCLIFDNRNRSWRELPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIF 60

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDT 454
           CT EQ+ +E       +  +Y  FGF   +V LSTRP+  +G    W+ AE  +   L+ 
Sbjct: 61  CTPEQIKSEMKGCLEFLHHVYTIFGFSFQLV-LSTRPDNYLGELEQWNAAEKALAESLNE 119

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH 514
                ++        G+GAFYGPK +  + DA+ R  QC TIQ+DF LP RFN  Y+   
Sbjct: 120 FGMPWKENP------GDGAFYGPKIDITIMDALKRAHQCATIQLDFQLPIRFNLSYIADD 173

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
            EK  PV+IHRA+ GS+ER I I+ ENF G
Sbjct: 174 GEKKRPVIIHRAILGSVERMIAILTENFAG 203


>gi|226330401|ref|ZP_03805919.1| hypothetical protein PROPEN_04319 [Proteus penneri ATCC 35198]
 gi|225201196|gb|EEG83550.1| hypothetical protein PROPEN_04319 [Proteus penneri ATCC 35198]
          Length = 242

 Score =  197 bits (502), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 100/239 (41%), Positives = 147/239 (61%), Gaps = 3/239 (1%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  DVA  I   LAK  +A  +NG++ D  + +  + ++ IIT +
Sbjct: 4   ITLPDGSQRQFENAVSVMDVAADIGPGLAKACIAGRVNGELVDACELIEHDANLAIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ +WP+ ++AIGP+IE+GFYYD D +   + ++L  +EK+
Sbjct: 64  DDEGLEIIRHSCAHLLGHAIKQLWPQTKMAIGPVIENGFYYDVDLDHSLTQEDLETLEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   D   +K+ +S  +ARE F S+ E YKV IL E+I       LY   E+ D+CR
Sbjct: 124 MLELAKTDYDVIKKRVSWAEARETFVSRGEDYKVAILDENISQDSQPGLYHHQEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           GPHV +  +    FKL K+AGAYWRG+S+  ML RIYGTAW  ++ +   L  L  S K
Sbjct: 184 GPHVPNM-RFCHNFKLQKIAGAYWRGNSDNKMLQRIYGTAWADKKTVKSLLRSLRRSCK 241


>gi|321309543|ref|YP_004191872.1| threonyl-tRNA synthetase [Mycoplasma haemofelis str. Langford 1]
 gi|319801387|emb|CBY92033.1| threonyl-tRNA synthetase [Mycoplasma haemofelis str. Langford 1]
          Length = 501

 Score =  197 bits (501), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 119/389 (30%), Positives = 201/389 (51%), Gaps = 17/389 (4%)

Query: 239 EESEKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEI-NT 296
           EE  ++DHR + + + +F      G+G+  W  +G  I + + +Y+ R  +++   I +T
Sbjct: 72  EEVHEKDHRGIGKNLRIFDFDPLIGAGMPIWLERGHLIKEEIKNYINRIQRNNGIAIVST 131

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P++  + L+Q SGHWD Y+ NMF       +++    + L+PM CP H+ ++    +  +
Sbjct: 132 PELGKKELYQTSGHWDHYQENMFPSL----SLEGEGEYILRPMTCPHHIILYKKQKRHEK 187

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +LP+   E   ++R E SG L GL R R     D H+FC K Q+F    K+  +I  I +
Sbjct: 188 QLPIAFGENARLHRYEYSGGLFGLERTRCMELIDTHLFCAKNQIFESLDKVFGIIQDIKE 247

Query: 417 DFGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
            F  E   + LS R     +K    + LW  +E  +K  LD+ K    + I      G+ 
Sbjct: 248 AFEIEYHSIVLSLRDVNNKDKFFDDENLWSLSEGSLKEFLDSKKIEYVEGI------GDA 301

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           AFYGPK ++ ++   G+     TIQ+DF+LP +F   Y     +   P+MIH  + G++E
Sbjct: 302 AFYGPKIDFQIETYAGKIITISTIQLDFSLPQKFELKYTGMDEKDHEPIMIHVGIIGTLE 361

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           RFI  ++E   G LP WLSP Q  +  +   S ++  +++ N  +S ++ +E D    ++
Sbjct: 362 RFIAYLLERNNGWLPFWLSPTQVTLIPVNRDSHLDSVRKLENFYRSKNIRVEVDQSGLSL 421

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIG 620
             KI +   K+    +I GDKEA E ++ 
Sbjct: 422 GKKIAKAIEKRSFGFMIVGDKEAQELNVA 450


>gi|229819712|ref|YP_002881238.1| tRNA synthetase class II (G H P and S) [Beutenbergia cavernae DSM
           12333]
 gi|229565625|gb|ACQ79476.1| tRNA synthetase class II (G H P and S) [Beutenbergia cavernae DSM
           12333]
          Length = 409

 Score =  197 bits (501), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 110/335 (32%), Positives = 170/335 (50%), Gaps = 15/335 (4%)

Query: 245 DHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQVLDQ 302
           DHR+L R++ LF   AE G+G+  W   G  I   L ++ + + +      + TP +  +
Sbjct: 4   DHRRLGRDLGLFATSAEVGAGLPLWLPDGAVIRGELEAFSLEQALASGCRRVYTPVLAKR 63

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            L+++SGHW  +   MF      +      +  L+P+NCP H  VF    +SYR+LP RL
Sbjct: 64  SLFERSGHWAKFSGEMFP-----EMPLGGESLVLRPVNCPHHTQVFAAEGRSYRDLPFRL 118

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AE GS++R+E SG + GL RVR    DDAH FC  +Q+ +E       I   Y   G + 
Sbjct: 119 AEVGSMFRSELSGVVGGLSRVRQINLDDAHSFCAPDQVADEVALALRAIRHCYDVLGIDV 178

Query: 423 IMVKLSTRPEKR--VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
              +LS R +    +G DA W  +E  ++  LD +     +R+      GE A YGPK +
Sbjct: 179 AYYRLSVRGDSGSYLGDDASWHRSERYLREALDEL-GLPYERVE-----GEAAIYGPKID 232

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
             + DA GR+    T+QVD  +P RF   Y      +  PV++HR +  S+ER   +++E
Sbjct: 233 VQVADARGREETLSTVQVDEQMPGRFGLTYTGDDGARHRPVLVHRGLLSSMERMTALLVE 292

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLL 575
              G +P WL+P+Q  V  +     + A  + + L
Sbjct: 293 LHDGRMPTWLAPVQVRVLPVADRHADAAGALRDEL 327


>gi|56966069|pdb|1TJE|A Chain A, Crystal Structure Of The Editing Domain Of Threonyl-Trna
           Synthetase
 gi|56966071|pdb|1TKE|A Chain A, Crystal Structure Of The Editing Domain Of Threonyl-Trna
           Synthetase Complexed With Serine
 gi|56966072|pdb|1TKG|A Chain A, Crystal Structure Of The Editing Domain Of Threonyl-Trna
           Synthetase Complexed With An Analog Of Seryladenylate
 gi|56966073|pdb|1TKY|A Chain A, Crystal Structure Of The Editing Domain Of Threonyl-Trna
           Synthetase Complexed With Seryl-3'-Aminoadenosine
          Length = 224

 Score =  197 bits (501), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 95/221 (42%), Positives = 143/221 (64%), Gaps = 3/221 (1%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D  D +  +  + IIT +
Sbjct: 4   ITLPDGSQRHYDHAVSPMDVALDIGPGLAKACIAGRVNGELVDACDLIENDAQLSIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ +WP  ++AIGP+I++GFYYD D ++  + +++  +EK+
Sbjct: 64  DEEGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVIDNGFYYDVDLDRTLTQEDVEALEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+  ++   +K+ +S  +ARE F ++ E+YKV IL E+I   +   LY   E+ D+CR
Sbjct: 124 MHELAEKNYDVIKKKVSWHEARETFANRGESYKVSILDENIAHDDKPGLYFHEEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAW 225
           GPHV +  +    FKLMK AGAYWRGDSN  ML RIYGTAW
Sbjct: 184 GPHVPNM-RFCHHFKLMKTAGAYWRGDSNNKMLQRIYGTAW 223


>gi|15220911|ref|NP_173238.1| threonyl-tRNA synthetase, putative / threonine--tRNA ligase,
           putative [Arabidopsis thaliana]
 gi|85701287|sp|Q8GZ45|SYTC_ARATH RecName: Full=Probable threonyl-tRNA synthetase, cytoplasmic;
           AltName: Full=Threonine--tRNA ligase; Short=ThrRS
 gi|9665073|gb|AAF97275.1|AC034106_18 Strong similarity to threonyl-tRNA synthetase from Arabidopsis
           thaliana gb|Y14329 and is a member of the tRNA
           synthetase PF|00587 class II
 gi|332191535|gb|AEE29656.1| threonyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 458

 Score =  197 bits (501), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 103/274 (37%), Positives = 155/274 (56%), Gaps = 7/274 (2%)

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
           NH      +LP+R+AEFG ++RNE SG+L G+ RVR F QDDAH+FC  +Q+  E   + 
Sbjct: 161 NHFPNIEAKLPIRMAEFGVLHRNEDSGALGGMTRVRRFVQDDAHIFCRVDQVEEEVKGVL 220

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
           + I  +Y+ FGF    + LSTRP+  +G    W  AEN ++  LD             + 
Sbjct: 221 DFIDYVYRIFGF-TYELTLSTRPKDHIGDLETWAKAENDLEKALDDFGKPWV------IK 273

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
            G+GAFYGPK +  + DA  R +QC TIQ+DF LP+ F   Y++  +E   PVMIH AV 
Sbjct: 274 EGDGAFYGPKIDITVSDARNRKFQCATIQLDFQLPACFKLKYLSEKNEMEAPVMIHSAVL 333

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRN 588
           GSIER   I++E++KG  P WLSP QAIV +++     YA+++   +      ++ D  +
Sbjct: 334 GSIERMFAILLEHYKGIWPFWLSPRQAIVCSLSEDCSSYAKQVQKQINEVGYYVDIDESD 393

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
            ++  K+ +        I++ G KE +   + +R
Sbjct: 394 RSLRKKVADARDAPYNYILVVGQKEVATGQVTVR 427



 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 69/133 (51%), Gaps = 9/133 (6%)

Query: 2   PSD-IKLTF-PDGSIKNFPVHATGS-DVAESISRSLAKKAVAVAINGKVCDLSDPVR-EG 57
           P D IK+T  PDG  K      T   D+A  IS+ LAK A+  ++N  + D++ P+  + 
Sbjct: 39  PHDPIKITLLPDGIEKEGRRWETSPMDIAVQISKGLAKSALVSSVNHVLWDMNRPLEGDC 98

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPI--IEDGFYYD--FDKEQP 113
           S+EI   +  +      HS AHI+ +A++  +   ++ IGP    ++GFYYD  +  E  
Sbjct: 99  SLEIFGFDSDQGRNTFWHSSAHILGQALEQEYG-CKLCIGPCEPRDEGFYYDSLYYGELG 157

Query: 114 FSSDELAQIEKKM 126
            + +    IE K+
Sbjct: 158 LNDNHFPNIEAKL 170


>gi|254230539|ref|ZP_04923908.1| threonyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|151936930|gb|EDN55819.1| threonyl-tRNA synthetase [Vibrio sp. Ex25]
          Length = 254

 Score =  196 bits (499), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 100/238 (42%), Positives = 155/238 (65%), Gaps = 4/238 (1%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPE 65
           +T PDGS + F    +  +VA+SI   LAK  +A  +NG   D  D + E  S+EIIT +
Sbjct: 17  ITLPDGSQRQFDNPVSTMEVAQSIGPGLAKATIAGRVNGNRVDACDLIEEDASLEIITVK 76

Query: 66  DP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  A++ ++P+ ++AIGP I++GFYYD D ++  + ++L +IEK
Sbjct: 77  DEVDGLEIVRHSCAHLLGHALKQLYPQAKMAIGPTIDNGFYYDIDLDESLTQEDLEKIEK 136

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLC 183
           +M+E+       +K+ +S ++AR+ FES+ E YKVEIL E++   +   LY   E+ D+C
Sbjct: 137 RMKELAKTKYEVVKKKVSWQEARDTFESRGEPYKVEILDENVSRDDRPGLYHHEEYIDMC 196

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           RGPHV +     + F L+ VAGAYWRG+S+  ML RIYGTA++ ++ L  +L  LEE+
Sbjct: 197 RGPHVPNM-SFCQHFTLLNVAGAYWRGNSDNKMLQRIYGTAFHDKKALKAHLTRLEEA 253


>gi|302348085|ref|YP_003815723.1| threonyl-tRNA synthetase [Acidilobus saccharovorans 345-15]
 gi|302328497|gb|ADL18692.1| threonyl-tRNA synthetase [Acidilobus saccharovorans 345-15]
          Length = 467

 Score =  195 bits (496), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 135/446 (30%), Positives = 222/446 (49%), Gaps = 49/446 (10%)

Query: 241 SEKRDHRKLAREMDL-----FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-------- 287
           S+++DH   A+++D+       I+  G+ V      G  +F     Y+R  +        
Sbjct: 2   SQEKDHMDYAQDLDIAARPDLTISVLGTDVGSLLGHGIPLFTIGGGYLRSALSQILVNFH 61

Query: 288 -KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA 346
            +  Y    TP V    L++ SGH   Y+ NMF  +       + + +A+KPMNCP H+ 
Sbjct: 62  ARRGYYIAETPIVSSGALFELSGHMGYYKQNMFVFQV------EGKEYAVKPMNCPFHIL 115

Query: 347 VFNHGLKSYR---ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE 403
           +F   +  +R    LP ++ E G V+R EPSGS++GL+R R FTQDDAH+    +   N 
Sbjct: 116 IFLSEVTRHRNKVSLPFKVFEVGRVHRLEPSGSVYGLLRSRSFTQDDAHIITLGKDAVNV 175

Query: 404 CLKIHNLIISIY-KDFGFE----KIMVKLSTRPEKRVGSDAL-----WDDAENIMKGVLD 453
              + + +I+IY K F  E     + ++LS   + ++G+D +     W+ AE+ ++G L+
Sbjct: 176 ITSVFDEMITIYSKLFNVEMNPSTVTLRLSLSDKSKIGTDFMGTKDEWEKAEDFLRGALE 235

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAI---GRDWQCGTIQVDFNLPSRFNAFY 510
            I +    R       GE AFYGPK + ++K      G++WQ GTIQ DFNLP RF  F 
Sbjct: 236 AIASKYGLRYTAAE--GEAAFYGPKIDVLVKLGSGQEGKEWQLGTIQFDFNLPRRFKIFD 293

Query: 511 VNSHSEKCHPV-MIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQ 569
                     V +IHRA+ GSIERF+G  ++N+KG LP  L+P+Q  V  I +   E+ +
Sbjct: 294 AAKELYGSEDVYIIHRALIGSIERFLGAYLDNYKGRLPFVLAPLQFAVLAIKAGD-EFDK 352

Query: 570 EIANL-LKSHHLSIETDFRN---ETINYKIRE-----HSIKKIPIIIICGDKEASERSIG 620
            + +  L  H   +   FR+   ET    +        S  K   I+  G +E  + S+ 
Sbjct: 353 RVEDFALSLHRALVAKGFRSGYGETTRTSLSGDVRLLESGPKPAAIVYVGRREIEKGSVT 412

Query: 621 IRRFGSTTTQKVSLLDAIPILTKESL 646
           +  +   + ++ S+  + P+   +++
Sbjct: 413 VSIYEGGSRRQTSVNASDPLGAADAI 438


>gi|309808028|ref|ZP_07701947.1| anticodon binding domain protein [Lactobacillus iners LactinV
           01V1-a]
 gi|308168711|gb|EFO70810.1| anticodon binding domain protein [Lactobacillus iners LactinV
           01V1-a]
          Length = 275

 Score =  194 bits (493), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 98/273 (35%), Positives = 150/273 (54%), Gaps = 11/273 (4%)

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR----PE 432
           + GL RVR  T +D H F   +Q+ +E  KI  LI+ +Y+DF       +LS R     +
Sbjct: 1   MSGLQRVREMTLNDGHTFVELDQVQSEFAKILKLIMEVYRDFDITDYYFRLSYRDPKNTD 60

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
           K   +D +W+ ++ ++KG +D +       +      GE AFYGPK +   K A+G D  
Sbjct: 61  KYFANDEMWERSQKMLKGAMDDLG------LEYVEAEGEAAFYGPKLDIQTKTALGNDET 114

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
             TIQ+DF LP RFN  YV    E+  PVM+HR + G++ERFI  + E +KG  P WL+P
Sbjct: 115 MSTIQLDFMLPERFNLSYVGKDGEEHRPVMVHRGIVGTMERFIAYLTEIYKGAFPTWLAP 174

Query: 553 IQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
           +Q  +  + + A  EYAQ + + L       E DFRNE + YKIRE   +K+P  ++ GD
Sbjct: 175 LQVKIIPVNNDAHGEYAQNVKDQLMKLGFRAEVDFRNEKLGYKIREAQTQKVPYTLVLGD 234

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            E    S+ +R++GS   +  +L + +  L+ +
Sbjct: 235 DELQHNSVNVRKYGSEDQESKALSEFVSELSAD 267


>gi|149001904|ref|ZP_01826858.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
 gi|147759713|gb|EDK66703.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
          Length = 223

 Score =  192 bits (487), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 94/207 (45%), Positives = 147/207 (71%), Gaps = 6/207 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           I +TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  + E GSIEI+T
Sbjct: 2   INITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGSIEIVT 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQI 122
           P+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D      S+++L +I
Sbjct: 62  PDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNTAGQISNEDLPRI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKE-NVTLYRQGEWFD 181
           E++MQ+I+  + P +++ ++ ++ARE+F  K + YK+E++E     E  +T+YRQGE+ D
Sbjct: 122 EEEMQKIVKENFPSIREEVTKDEAREIF--KNDPYKLELIEEHSEDEGGLTIYRQGEYVD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYW 208
           LCRGPHV STG++ + F L+ VAGAYW
Sbjct: 180 LCRGPHVPSTGRI-QIFHLLHVAGAYW 205


>gi|212696508|ref|ZP_03304636.1| hypothetical protein ANHYDRO_01046 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212676493|gb|EEB36100.1| hypothetical protein ANHYDRO_01046 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 230

 Score =  192 bits (487), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 93/228 (40%), Positives = 143/228 (62%), Gaps = 4/228 (1%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           IK+  PD S+K +    +  DV + IS  L + AV   +NGKV   ++P+ E S  +++ 
Sbjct: 3   IKIKLPDESVKEYEKGVSVGDVTKDISEGLFRSAVGAVVNGKVMGYAEPINEDSDFKVVK 62

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            ED     +  H+ +H+MA A++ +WPE + AIGP I++GFYYD D E  F  ++L +IE
Sbjct: 63  FEDKEGKEIFWHTSSHLMAAAIKEMWPEAKFAIGPAIDNGFYYDIDLEHRFVPEDLPKIE 122

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE--WFD 181
            KM+EI  +D   +++ +S  +A E F+ + + YKVE++E +P  E +TLY  G+  + D
Sbjct: 123 AKMKEIAKKDLKMVRKEISRAEALEYFKKENQEYKVELIEDLPEDELITLYEMGDNVFVD 182

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQ 229
           LC+GPH+ ST  +K   KL  +AGAYWRGDS+R ML RIYG ++  + 
Sbjct: 183 LCKGPHLLSTKSIKA-VKLNSIAGAYWRGDSDRKMLQRIYGISFEKKN 229


>gi|260899056|ref|ZP_05907497.1| threonine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
 gi|308088693|gb|EFO38388.1| threonine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
          Length = 229

 Score =  191 bits (486), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 96/226 (42%), Positives = 149/226 (65%), Gaps = 4/226 (1%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPE 65
           +T PDGS + F    +  +VA+SI   LAK  +A  +NG   D  D + E  S+EIIT +
Sbjct: 4   ITLPDGSQRQFDNPVSTMEVAQSIGPGLAKATIAGRVNGNRVDACDLIEEDASLEIITVK 63

Query: 66  DP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  A++ ++P+ ++AIGP I++GFYYD D ++  + ++L +IEK
Sbjct: 64  DEVDGLEIVRHSCAHLLGHALKQLYPQAKMAIGPTIDNGFYYDIDLDESLTQEDLEKIEK 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLC 183
           +M+E+       +K+ +S ++AR+ FES+ E YKVEIL E++   +   LY   E+ D+C
Sbjct: 124 RMKELAKTKYEVVKKKVSWQEARDTFESRGEPYKVEILDENVSRDDRPGLYHHEEYIDMC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQ 229
           RGPHV + G   + F L+ VAGAYWRG+S+  ML RIYGTA++ ++
Sbjct: 184 RGPHVPNMG-FCQHFTLLNVAGAYWRGNSDNKMLQRIYGTAFHDKK 228


>gi|90410627|ref|ZP_01218643.1| threonyl-tRNA synthetase [Photobacterium profundum 3TCK]
 gi|90328868|gb|EAS45152.1| threonyl-tRNA synthetase [Photobacterium profundum 3TCK]
          Length = 195

 Score =  190 bits (483), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 85/175 (48%), Positives = 114/175 (65%)

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG 529
           GEGAFYGPK E+ L D + R WQCGT+Q+DF LP R  A YV   +E+  PVMIHRA+ G
Sbjct: 10  GEGAFYGPKIEFTLHDCLDRAWQCGTVQLDFALPERLGATYVGEDNERHTPVMIHRAILG 69

Query: 530 SIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE 589
           S+ERFIGI+IE + G  P WL+P QA+V  IT S  EYAQEI   L+   + +  D RNE
Sbjct: 70  SLERFIGILIEEYAGFFPTWLAPQQAVVMNITDSQSEYAQEIVKKLQKCGIRVNADLRNE 129

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            I +KIREH++K++P +++CGDKE     I +R        K+ + + +  L +E
Sbjct: 130 KIGFKIREHTLKRVPYMLVCGDKEVEAGEIAVRTRKGKDLGKLKIDELVAFLQQE 184


>gi|302518216|ref|ZP_07270558.1| LOW QUALITY PROTEIN: threonyl-tRNA synthetase [Streptomyces sp.
           SPB78]
 gi|302427111|gb|EFK98926.1| LOW QUALITY PROTEIN: threonyl-tRNA synthetase [Streptomyces sp.
           SPB78]
          Length = 448

 Score =  189 bits (479), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 105/310 (33%), Positives = 160/310 (51%), Gaps = 13/310 (4%)

Query: 245 DHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           DH +L R + L+      G+G+ +    G  +   L  Y+R  ++ D Y+ +++P +  Q
Sbjct: 11  DHHRLGRALGLYGTDPLLGAGLPYLLPDGASVRHALEEYVRGLEVADGYQHVHSPVLGKQ 70

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            L+ +SGHW  YRA+MF              F L+P  CP H  ++    +SYRELP+R+
Sbjct: 71  ELYVRSGHWAHYRADMFPPMEVGGE-----HFVLRPSLCPHHALIYRAQARSYRELPLRI 125

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AE G ++R EPSG+L GL RVR    +DAH+FC  E +  E      LI + Y+  G   
Sbjct: 126 AELGGMFRAEPSGTLGGLTRVRAIHLNDAHLFCAPESLAGEVAGALALIRTAYRALGLAP 185

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIM-KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              +LS       G DA +  AE +  +      +  +   ++     GE AFYGPK + 
Sbjct: 186 SRYRLSL-----PGEDAKYALAEGVWERSAAALAEALAGAGLDWEEERGEAAFYGPKIDV 240

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
             +DA GR++   T+Q DF+ P+ F   Y  +   +  PVM+HR+V GS+ER +  +IE 
Sbjct: 241 QARDAAGREFTLSTVQADFHQPAAFGLDYRAADGSRPRPVMVHRSVLGSLERVLARLIEV 300

Query: 542 FKGNLPLWLS 551
             G  P WL+
Sbjct: 301 HGGAFPAWLA 310


>gi|318079886|ref|ZP_07987218.1| threonyl-tRNA synthetase [Streptomyces sp. SA3_actF]
          Length = 368

 Score =  188 bits (478), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 106/312 (33%), Positives = 161/312 (51%), Gaps = 17/312 (5%)

Query: 245 DHRKLAREMDLFHIAED---GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           DH +L R + L+    D   G+G+ +    G  +   L  Y+R  ++ D Y+ +++P + 
Sbjct: 11  DHHRLGRALGLY--GTDPLLGAGLPYLLPDGASVRHALEEYVRGLEVADGYQHVHSPVLG 68

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            Q L+ +SGHW  YRA+MF              F L+P  CP H  ++    +SYRELP+
Sbjct: 69  KQELYVRSGHWAHYRADMFPPMEVGGE-----HFVLRPSLCPHHALIYRAQARSYRELPL 123

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G ++R EPSG+L GL RVR    +DAH+FC  E +  E      LI + Y+  G 
Sbjct: 124 RIAELGGMFRAEPSGTLGGLTRVRAIHLNDAHLFCAPESLAGEVAGALALIRTAYRALGL 183

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIM-KGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
                +LS       G DA +  AE +  +      +  +   ++     GE AFYGPK 
Sbjct: 184 APSRYRLSL-----PGEDAKYALAEGVWERSAAALAEALAGAGLDWEEERGEAAFYGPKI 238

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +   +DA GR++   T+Q DF+ P+ F   Y  +   +  PVM+HR+V GS+ER +  +I
Sbjct: 239 DVQARDAAGREFTLSTVQADFHQPTAFGLDYRAADGSRPRPVMVHRSVLGSLERVLARLI 298

Query: 540 ENFKGNLPLWLS 551
           E   G  P WL+
Sbjct: 299 EVHGGAFPAWLA 310


>gi|118431208|ref|NP_147510.2| threonyl-tRNA synthetase [Aeropyrum pernix K1]
 gi|150421682|sp|Q9YDW0|SYT1_AERPE RecName: Full=Probable threonyl-tRNA synthetase 1; AltName:
           Full=Threonine--tRNA ligase 1; Short=ThrRS 1
 gi|262118516|pdb|3A32|A Chain A, Crystal Structure Of Putative Threonyl-Trna Synthetase
           Thrrs-1 From Aeropyrum Pernix
 gi|116062532|dbj|BAA79787.2| threonyl-tRNA synthetase [Aeropyrum pernix K1]
          Length = 471

 Score =  188 bits (478), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 135/429 (31%), Positives = 212/429 (49%), Gaps = 40/429 (9%)

Query: 234 YLYFLEESEKRDHRK--LAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDD 290
           Y Y L+ + K D R     RE   F     G+GV  +   G  I   L   + +   +  
Sbjct: 12  YAYELDITVKPDSRVPVFNREFATF----TGAGVPLFSLGGGPIRYALAEVLAKFHARRG 67

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH 350
           Y  + TP +    L++ SGH + YR NM+          +   FA+KPMNCP H+ +F +
Sbjct: 68  YYVVETPIIASTELFKVSGHIEFYRNNMYLFDI------EGHEFAVKPMNCPYHILLFLN 121

Query: 351 GLKSYRE---LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN---EC 404
            +  +R    LP ++ EFG V+R EPSGS++GL+RVRGFTQDDAH+     ++ +   + 
Sbjct: 122 EVAKHRSKLPLPFKVFEFGRVHRYEPSGSIYGLLRVRGFTQDDAHIIVPGGRVIDVVYDV 181

Query: 405 LKIHNLIISIYKDFGF--EKIMVKLSTRPEKRVGSDAL-----WDDAENIMKGVLDTIKN 457
            +   L++      G   E   V+LS   +  +G + +     W+ AE  ++     I  
Sbjct: 182 FEEMKLVLERLFKLGVSSETFKVRLSMSDKSLIGKEFMGSKEEWEGAEEALREAASRINE 241

Query: 458 SSQDRINTGVLLGEGAFYGPKFEYIL---KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH 514
                I+   L GE AFYGPK ++I+   +  + ++WQ GTIQ DFNLP RF  + V   
Sbjct: 242 KYG--IDIVELEGEAAFYGPKLDFIMMVEESGVSKEWQMGTIQFDFNLPRRFRLYDVVRE 299

Query: 515 SEKCHPV-MIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQ-AIVTTITSSAV-----EY 567
                 V +IHRA+ GSIERF+G+ +E+ +G +P  L+PIQ A++   T   V     + 
Sbjct: 300 EFGIEEVYIIHRALLGSIERFLGVYLEHRRGRMPFTLAPIQFAVIAVKTGGEVDREIEDL 359

Query: 568 AQEIANLLKSHHLSIETDFRNET-INYKIRE-HSIKKIPIIIICGDKEASERSIGIRRFG 625
           A  IA  L      +     ++T ++  +R   S  K  + +  G KE  E+ + +R F 
Sbjct: 360 ASSIAKGLLDKGFRVAVKGSSKTGLSSDVRHIESTAKPAVNVFIGAKEVREKVLDVRVFD 419

Query: 626 STTTQKVSL 634
             + ++  L
Sbjct: 420 LESMKRRRL 428


>gi|295839715|ref|ZP_06826648.1| threonine-tRNA ligase [Streptomyces sp. SPB74]
 gi|295827624|gb|EDY46892.2| threonine-tRNA ligase [Streptomyces sp. SPB74]
          Length = 425

 Score =  187 bits (476), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 122/418 (29%), Positives = 199/418 (47%), Gaps = 26/418 (6%)

Query: 241 SEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           + + DH +L R + L+      G+G+ +    G  +   L  Y+R  ++   Y+ +++P 
Sbjct: 25  APEHDHHRLGRALGLYGTDPLLGAGLPYLLPDGASVRHALEEYVRALEVAGGYQHVHSPV 84

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT----FALKPMNCPGHVAVFNHGLKS 354
           +  Q L+ +SGHW  YRA         DT+  +      F L+P  CP H  ++    +S
Sbjct: 85  LGKQELYVRSGHWAHYRA---------DTLPPMEVGGEHFVLRPGLCPHHALIYRARARS 135

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YR+LP+R+AE G ++R EPSG+L GL RVR    +DAH+FC  E +  E      LI + 
Sbjct: 136 YRDLPLRVAELGGMFRAEPSGTLGGLTRVRAIHLNDAHLFCAPESLAAEVAGALALIRTA 195

Query: 415 YKDFGFEKIMVKLSTRPE--KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
           Y+  G      +LS   E  K   ++  W   E     + + +  S  D        GE 
Sbjct: 196 YRALGLAPSRYRLSLPGEGAKYALAEGGW---ERAAAALAEALAASGLDWEEE---RGEA 249

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           AFYGPK +   +DA GR++   T+Q DF+ P+ F   Y  +   +  PVM+HR+V GS+E
Sbjct: 250 AFYGPKIDVQARDAAGREFTLSTVQADFHQPAAFGLDYRAADGSRPRPVMVHRSVLGSLE 309

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIET-DFRNETI 591
           R +  +IE   G  P WL+P+Q  V  +     E A+      ++  L          T+
Sbjct: 310 RVLARLIEVHGGAFPAWLAPVQVGVVPVGEEQEEAAESFVRRCRAAGLRARRYPAHAGTL 369

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPD 649
             ++R    + +P + + G +EA+   + +RR            +A+ +L   S  P+
Sbjct: 370 AARVRR--ARLVPHLAVLGAREAAAGEVALRRRDGERLPARPEAEAVALLVAGSAIPE 425


>gi|299471018|emb|CBN78879.1| threonine--tRNA ligase [Ectocarpus siliculosus]
          Length = 704

 Score =  187 bits (475), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 118/417 (28%), Positives = 205/417 (49%), Gaps = 58/417 (13%)

Query: 4   DIKLTFPDGS-IKNFPVHATGSDVAESISRSLAKKAVAVAI------------------- 43
           +I +  PDG+  K      T  D+A+ IS++LAK+ V   +                   
Sbjct: 113 EISVVLPDGTEKKGVSYETTPMDIAKGISKNLAKEVVVAEVRYSSRIEDDEQNVSSADGM 172

Query: 44  ------------------------NGKVCDLSDP-VREGSIEIITPEDPRSLAVIRHSCA 78
                                   + ++ D+  P +    + ++  ED  +  V  HS A
Sbjct: 173 EAEGSDEEEEGGGCGHDHGDKEDASAELWDMLRPLIGNCRLRLLKFEDKEAQTVFWHSSA 232

Query: 79  HIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQIEKKMQEIIARDSPFL 137
           H +  A++       +  GP +++GF+YD +         +L  ++K++         F 
Sbjct: 233 HCLGFALEKKLG-CHLTHGPPVDNGFFYDCYMGGSAVGEKDLKDLDKEVTRCCKAKQTFD 291

Query: 138 KQYLSHEKARELFESKKEAYKVEILES-IPAKENVTLYRQGEWFDLCRGPHVRSTGQVKK 196
           +  L+ E+A ++F+    A+K E + + IP   + T+YR G++ DLCRGPHV  +  ++ 
Sbjct: 292 RLVLTKEEALDMFDYN--AFKKEYINTRIPDGGSTTVYRNGDFVDLCRGPHVPYSTMIQA 349

Query: 197 FFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLF 256
           F   ++ +   W G      L R+YG A+ ++ ++ ++  F E+++KRDHR++  + DLF
Sbjct: 350 F-NSIRTSSTNWLGKVTNDPLQRVYGVAFPSKDQMKKFNEFQEQAKKRDHRRVGVQQDLF 408

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYR 315
                  G  F+   G +I+  L+ ++R +  K  YEE+ TP + +  LW+QSGH   Y+
Sbjct: 409 FFHPLSPGSAFFLPHGTRIYNRLMEFIRSEYWKRGYEEVTTPNMYNMDLWEQSGHAAHYK 468

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE 372
             MF          + + F LKPMNCPGH  +F+ G+KS+RELP+R A+FG ++RNE
Sbjct: 469 DAMFRFPV------EGQEFGLKPMNCPGHCIMFSQGVKSWRELPLRYADFGVLHRNE 519



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 57/174 (32%), Positives = 85/174 (48%), Gaps = 26/174 (14%)

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE-----------------------KCHPV 521
           DA+ R  QC T+Q+DF LP RFN  Y     E                       +  PV
Sbjct: 522 DAMERVHQCATVQLDFQLPIRFNLKYSAGTEEHGDAKPEAAKPAEGGGSEAKPAGEKRPV 581

Query: 522 MIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLS 581
           MIHRA+ GS+ER I ++ E++ G  P WLSP QA++  +     +YA  + + L +    
Sbjct: 582 MIHRAMLGSLERMIAVLTEHYGGKWPFWLSPRQALIVPVAQKYNDYATNVKDRLHNAGFY 641

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
           ++ +  N+T+N K+RE    K   I++ G+ E     + +R  G    QKVS L
Sbjct: 642 VDVETSNKTLNKKVREGVTAKYNYILVVGEAEEEADEVNLRGKGQ---QKVSDL 692


>gi|167422237|ref|ZP_02313990.1| threonyl-tRNA synthetase (Threonine--tRNA ligase)(ThrRS) [Yersinia
           pestis biovar Orientalis str. MG05-1020]
 gi|166958743|gb|EDR55764.1| threonyl-tRNA synthetase (Threonine--tRNA ligase)(ThrRS) [Yersinia
           pestis biovar Orientalis str. MG05-1020]
          Length = 219

 Score =  187 bits (474), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 91/217 (41%), Positives = 139/217 (64%), Gaps = 3/217 (1%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D SD +  +  + IIT +
Sbjct: 4   ITLPDGSQRHYDHAVSVLDVALDIGPGLAKACIAGRVNGELVDASDLIESDAQLAIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L ++RHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D E   + ++LA +EK+
Sbjct: 64  DAEGLEILRHSCAHLLGHAIKQLWPDTKMAIGPVIDNGFYYDVDIEHTLTQEDLALLEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+  +D   +K+ +S ++AR+ F ++ E YKV IL E+I   +   LY   E+ D+CR
Sbjct: 124 MHELADKDYDVIKKKVSWQEARDTFAARGEDYKVAILDENISRDDRPGLYHHEEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIY 221
           GPHV +  +    FKL K +GAYWRGDS   ML RIY
Sbjct: 184 GPHVPNM-RFCHHFKLQKTSGAYWRGDSKNKMLQRIY 219


>gi|91229885|ref|ZP_01262956.1| threonyl-tRNA synthetase [Vibrio alginolyticus 12G01]
 gi|91187354|gb|EAS73721.1| threonyl-tRNA synthetase [Vibrio alginolyticus 12G01]
          Length = 208

 Score =  184 bits (467), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 87/204 (42%), Positives = 122/204 (59%), Gaps = 6/204 (2%)

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDF 500
           WD +E  +K  L+++       I   +  GEGAFYGPK E+ L D + R WQCGT+Q+DF
Sbjct: 1   WDQSEEALKQSLESMD------IPYEIQEGEGAFYGPKIEFTLYDCLDRAWQCGTVQLDF 54

Query: 501 NLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTI 560
           NLP R  A YV  ++E+  PVMIHRA+ GS+ERFIGI+IE + G  P WL+P QA++  I
Sbjct: 55  NLPGRLGATYVGENNERLVPVMIHRAILGSLERFIGILIEEYAGFFPTWLAPEQAVLMNI 114

Query: 561 TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
           T     Y QEI   L+   +  + D RNE I +KIREH++K++P +++ GD+E     I 
Sbjct: 115 TDKQSGYVQEIVQKLQKSGIRAKADLRNEKIGFKIREHTLKRVPYMLVVGDQEMEAGEIA 174

Query: 621 IRRFGSTTTQKVSLLDAIPILTKE 644
           +R        K  + D I  +  E
Sbjct: 175 VRTRKGKDLGKFKVDDFIAYIQDE 198


>gi|261883755|ref|ZP_06007794.1| threonyl-tRNA synthetase [Campylobacter fetus subsp. venerealis
           str. Azul-94]
          Length = 225

 Score =  183 bits (465), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 86/206 (41%), Positives = 131/206 (63%), Gaps = 6/206 (2%)

Query: 429 TRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIG 488
           T+P K VG DA+W+ A   +K  LD      +  +  G+  G GAFYGPK +  + DA+ 
Sbjct: 10  TKPAKAVGDDAVWEIATKALKDALD------EKGLKYGIDEGGGAFYGPKIDIKITDALK 63

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPL 548
           R WQCGTIQVDFNLP+RF+  Y++ ++E+  PVM+HRA+ GS ERFIGI++E+  G LP 
Sbjct: 64  RKWQCGTIQVDFNLPARFDLGYIDENNERKQPVMLHRAIMGSFERFIGILLEHTAGELPF 123

Query: 549 WLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIII 608
           W++P Q ++  I++   +YA E+ +LL    +  E   +NET+N KIR    +++P+II+
Sbjct: 124 WIAPTQVVIIPISNEHHKYANEVHSLLLDMDVDSEIFNKNETLNKKIRTAEKQRVPMIIV 183

Query: 609 CGDKEASERSIGIRRFGSTTTQKVSL 634
            GD E + R + +R   +   + +SL
Sbjct: 184 LGDNEVTNRGVALRDRRAREQKDMSL 209


>gi|282898001|ref|ZP_06305996.1| Threonyl-tRNA synthetase [Raphidiopsis brookii D9]
 gi|281197145|gb|EFA72046.1| Threonyl-tRNA synthetase [Raphidiopsis brookii D9]
          Length = 224

 Score =  181 bits (460), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 97/221 (43%), Positives = 142/221 (64%), Gaps = 5/221 (2%)

Query: 81  MAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQY 140
           MA AVQ ++P+ QV IGP IE+GFYYDFD  +PFS  +L  I+K+M +II R  P +++ 
Sbjct: 1   MAMAVQKLFPKAQVTIGPWIENGFYYDFDNPEPFSDKDLKAIQKEMVKIINRKLPLIREE 60

Query: 141 LSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG-EWFDLCRGPHVRSTGQVK-KFF 198
           +S E+A++  E  +E YK+EIL  I  +E +T+Y  G EW+DLC GPHV +T  +  K  
Sbjct: 61  VSREEAKKRIEKIQEPYKLEILADI-KQEPITIYHLGDEWWDLCAGPHVENTKDINPKAI 119

Query: 199 KLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI 258
           +L  VAGAYWRGD  +  L RIY TAW T ++L +Y    EE+ +RDHRK+ +E+ LF  
Sbjct: 120 ELESVAGAYWRGDETKAQLQRIYATAWETPEQLGEYKRRKEEALRRDHRKIGKELGLFIF 179

Query: 259 AED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTP 297
           ++  G G+  W  KG  +   L  ++++ ++K  Y  + TP
Sbjct: 180 SDPVGPGLPLWTPKGTLLRSILEDFLKKEQLKRGYLPVVTP 220


>gi|255027300|ref|ZP_05299286.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL J2-003]
          Length = 181

 Score =  181 bits (459), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 83/181 (45%), Positives = 130/181 (71%), Gaps = 1/181 (0%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           +K+TFPDG++K F    + +D+A SIS  L KKA+A  +NG++ DL  P+ E G+IEI+T
Sbjct: 1   MKITFPDGAVKEFEPGVSTADIAASISPGLKKKALAGKLNGELLDLVTPIHEDGAIEIVT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+   +L ++RHS AH+MA+A++ ++P+V+  +GP IE GFYYD D E   S + L +IE
Sbjct: 61  PDHEDALGILRHSTAHLMAQALKRLYPDVKFGVGPAIESGFYYDIDTEAVISDESLVEIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+MQ+I+  + P  ++ +S E+A + F++  + YK+E++E+IP  E VT+Y QGE+FDLC
Sbjct: 121 KEMQKIVRENVPIEREVVSREEAIKRFKAIGDQYKLELIEAIPEDETVTIYTQGEFFDLC 180

Query: 184 R 184
           R
Sbjct: 181 R 181


>gi|330861019|emb|CBX71291.1| hypothetical protein YEW_JY42990 [Yersinia enterocolitica W22703]
          Length = 195

 Score =  181 bits (458), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 73/153 (47%), Positives = 107/153 (69%)

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG 529
           GEGAFYGPK E+ L D + R WQCGT+Q+DF+LP R +A Y+  ++++  PVMIHRA+ G
Sbjct: 10  GEGAFYGPKIEFTLHDCLDRAWQCGTVQLDFSLPGRLSASYIGENNDRQVPVMIHRAILG 69

Query: 530 SIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE 589
           S+ERFIGI+ E + G  P WL+P+Q +V  IT S  +Y Q++   L+   +  + D RNE
Sbjct: 70  SMERFIGILTEEYAGFFPTWLAPVQVVVMNITDSQSDYVQQVTKKLQDAGIRAKADLRNE 129

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
            I +KIREH+++++P +++CGDKE     I +R
Sbjct: 130 KIGFKIREHTLRRVPYMLVCGDKEVESGKIAVR 162


>gi|238591358|ref|XP_002392585.1| hypothetical protein MPER_07812 [Moniliophthora perniciosa FA553]
 gi|215458845|gb|EEB93515.1| hypothetical protein MPER_07812 [Moniliophthora perniciosa FA553]
          Length = 210

 Score =  180 bits (457), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 90/216 (41%), Positives = 131/216 (60%), Gaps = 8/216 (3%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KD 289
           +T +  +L E+ KRDHRK+ RE +LF   +   G  FW   G +I+  L+  +R +  K 
Sbjct: 1   MTAHKEWLAEAAKRDHRKIGREQELFFFNDVSPGSCFWLPHGTRIYNNLVELLRSEYWKR 60

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
            Y+E+ +P + +  LW+ SGHW +Y   MF +    +       +ALKPMNCPGH  +F+
Sbjct: 61  GYQEVISPNMFNTKLWETSGHWQNYTDGMFVLDVEKEK------WALKPMNCPGHCIIFD 114

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
              +SY+ELP+R+AEFG ++RNE SG+L GL RVR F QDD HVFC   Q+  E  ++ +
Sbjct: 115 SRDRSYKELPIRMAEFGIIHRNEASGALTGLTRVRRFVQDDTHVFCMPSQIEEEIGRLFD 174

Query: 410 LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
            +  +Y  FGFE   ++LSTRPE  +G    W+ AE
Sbjct: 175 FMQHVYGLFGFE-FHLELSTRPENFLGDIKTWEVAE 209


>gi|262118515|pdb|3A31|A Chain A, Crystal Structure Of Putative Threonyl-Trna Synthetase
           Thrrs-1 From Aeropyrum Pernix (Selenomethionine
           Derivative)
          Length = 471

 Score =  179 bits (455), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 134/429 (31%), Positives = 207/429 (48%), Gaps = 40/429 (9%)

Query: 234 YLYFLEESEKRDHRK--LAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDD 290
           Y Y L+ + K D R     RE   F     G+GV  +   G  I   L   + +   +  
Sbjct: 12  YAYELDITVKPDSRVPVFNREFATF----TGAGVPLFSLGGGPIRYALAEVLAKFHARRG 67

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH 350
           Y  + TP +    L++ SGH + YR N +          +   FA+KP NCP H+ +F +
Sbjct: 68  YYVVETPIIASTELFKVSGHIEFYRNNXYLFDI------EGHEFAVKPXNCPYHILLFLN 121

Query: 351 GLKSYRE---LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN---EC 404
            +  +R    LP ++ EFG V+R EPSGS++GL+RVRGFTQDDAH+     ++ +   + 
Sbjct: 122 EVAKHRSKLPLPFKVFEFGRVHRYEPSGSIYGLLRVRGFTQDDAHIIVPGGRVIDVVYDV 181

Query: 405 LKIHNLIISIYKDFGF--EKIMVKLSTRPEKRV-----GSDALWDDAENIMKGVLDTIKN 457
            +   L++      G   E   V+LS   +  +     GS   W+ AE  ++     I  
Sbjct: 182 FEEXKLVLERLFKLGVSSETFKVRLSXSDKSLIGKEFXGSKEEWEGAEEALREAASRINE 241

Query: 458 SSQDRINTGVLLGEGAFYGPKFEYIL---KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH 514
                I+   L GE AFYGPK ++I    +  + ++WQ GTIQ DFNLP RF  + V   
Sbjct: 242 KYG--IDIVELEGEAAFYGPKLDFIXXVEESGVSKEWQXGTIQFDFNLPRRFRLYDVVRE 299

Query: 515 SEKCHPV-MIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQ-AIVTTITSSAV-----EY 567
                 V +IHRA+ GSIERF+G+ +E+ +G  P  L+PIQ A++   T   V     + 
Sbjct: 300 EFGIEEVYIIHRALLGSIERFLGVYLEHRRGRXPFTLAPIQFAVIAVKTGGEVDREIEDL 359

Query: 568 AQEIANLLKSHHLSIETDFRNET-INYKIRE-HSIKKIPIIIICGDKEASERSIGIRRFG 625
           A  IA  L      +     ++T ++  +R   S  K  + +  G KE  E+ + +R F 
Sbjct: 360 ASSIAKGLLDKGFRVAVKGSSKTGLSSDVRHIESTAKPAVNVFIGAKEVREKVLDVRVFD 419

Query: 626 STTTQKVSL 634
             + ++  L
Sbjct: 420 LESXKRRRL 428


>gi|325990107|ref|YP_004249806.1| threonyl-tRNA synthetase [Mycoplasma suis KI3806]
 gi|323575192|emb|CBZ40857.1| Threonyl-tRNA synthetase [Mycoplasma suis]
          Length = 425

 Score =  175 bits (444), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 115/410 (28%), Positives = 201/410 (49%), Gaps = 14/410 (3%)

Query: 245 DHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEINTPQVLD 301
           DHR + +   LF+ +++ GSG  FW  +G+K+ + +  Y+    +D      + TP +  
Sbjct: 17  DHRAVGKNKGLFYFSKEIGSGFSFWASEGYKLREIIKRYINDFQRDICGINLVQTPILGK 76

Query: 302 QHLWQQSGHWDSYRANMF-AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
             ++Q++GH   Y  N+F A+K      K+   + L+PM CP H+ +    + SY++LP 
Sbjct: 77  TEIYQKTGHLPLYDENIFPAMK------KEGEEWILRPMTCPHHILLAKEVIMSYKQLPY 130

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
            + E   ++R E SG L GL RVR     D H+F   E   +        + ++   F  
Sbjct: 131 LMGENSCLHRYEYSGGLLGLKRVRAMELIDTHIFVLPEHCEDMIKSSLEWVWTLLNKFRI 190

Query: 421 EKIMVKLSTRPEKR--VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
               + L+TR  K+  + S   W+  E I+         S    ++     GE AFYGPK
Sbjct: 191 RIKEIVLATRSSKQKYLISGDEWNQTEEILFSATKEWIKSKNISVSLVRKEGEAAFYGPK 250

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++   D+  +++   T+Q+D  +P +     ++++    +P +IH  + G++ERFI  +
Sbjct: 251 IDFNAVDSSNQEFTISTVQLDSQMPKKLEFSILDANQNSINPWIIHLGLIGTLERFIAYL 310

Query: 539 IENFKGNLPLWLSPIQ-AIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +E++ G LP WL P Q +I+T    S+    +E+     S+    + D R+E I+ KI  
Sbjct: 311 LEDWGGKLPFWLLPTQISILTVRIDSSRPELKELIKKFSSYGFRAKLDLRDERISKKIVN 370

Query: 598 HSIKKIPIIIICGDKEASERS-IGIRRFGSTTTQKVSLLDAIPILTKESL 646
              ++IP  II G+KE      I  R  G    +++S  D I  L++E +
Sbjct: 371 AVNERIPFQIIIGEKELQNLDLINFRELGKEGEKQLSFSDFINYLSQEEI 420


>gi|242208348|ref|XP_002470025.1| predicted protein [Postia placenta Mad-698-R]
 gi|220730925|gb|EED84775.1| predicted protein [Postia placenta Mad-698-R]
          Length = 470

 Score =  173 bits (438), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 140/481 (29%), Positives = 214/481 (44%), Gaps = 73/481 (15%)

Query: 165 IPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTA 224
           +P   + T+YR G   DLC GPH+  T  ++              G +   +L RIYG  
Sbjct: 3   VPDGSSTTVYRCGAMIDLCVGPHIPHTVSIQS-----------PHGYNVNDLLQRIYGIL 51

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR 284
           +  + +L++Y  FL E+ +R+HRK+ +E  LF   +   G  FW   G  ++ TL+  MR
Sbjct: 52  FPDKTQLSEYKEFLAEAARREHRKIGKEQKLFFFNDLSPGGYFWRPHGTHVYNTLVELMR 111

Query: 285 RK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPG 343
            + IK  Y+E+ +  +                       CA   +++    ALK MN PG
Sbjct: 112 SEYIKRGYQEVVSCNI---------------------DLCALAELQE--RHALKLMNFPG 148

Query: 344 HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE 403
           H  +F+   +SY+ELP+ +AEF  V+RNE SG+L GL RV  F QDD HVFC   Q    
Sbjct: 149 HCLIFDSRDRSYKELPICMAEFWIVHRNEVSGTLTGLTRVCRFVQDDMHVFCMPSQE--- 205

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEK--RVGSDALWDDAENIMKGVLDTIKNSSQD 461
             +I+NL      DF  + IM    +      R G    W      M+ +  +I+ S   
Sbjct: 206 -EEIYNLF-----DF-MQHIMTSSDSTSVSSCRRGLTTTWARLRRGMR-LRTSIEESLGQ 257

Query: 462 RINTGVLLGEG-AFYGPKF------EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH 514
            I+  V  G       P        ++ ++ A   + +  +    F L  R      ++ 
Sbjct: 258 AISRPVTSGRSIPATAPSTARRSTSQFAMRCAAHFNARTSSSTSSFRLKYRSADDTASAD 317

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANL 574
                PV+IHRA+ GS+E FI I+ E+F      WLSP+QA+V        EYA E+A  
Sbjct: 318 KPPSRPVIIHRAILGSLEWFIAIITEHFARKWLFWLSPLQALVV-----PTEYASEVAQK 372

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIII-------------ICGDKEASERSIGI 621
           L    L  + D  +  +  +IR+  I +    +             + G +E   RS+ I
Sbjct: 373 LSDLRLFADVDSGDNVLPIEIRDSEITQYDFTLTRIAETQCNHYMTVLGQEELGGRSVNI 432

Query: 622 R 622
           R
Sbjct: 433 R 433


>gi|226321240|ref|ZP_03796773.1| Threonyl-tRNA synthetase [Borrelia burgdorferi 29805]
 gi|226233369|gb|EEH32117.1| Threonyl-tRNA synthetase [Borrelia burgdorferi 29805]
          Length = 231

 Score =  173 bits (438), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 86/228 (37%), Positives = 134/228 (58%), Gaps = 6/228 (2%)

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           ++  FGF      LST+P+K VG+D+ W+ +  +++  L      S   +   +  G GA
Sbjct: 1   MWSKFGFSNPKAYLSTKPDKSVGNDSDWEMSLKVLEETL------SDFEVPYEIDKGGGA 54

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  + D++ R+WQ  TIQ DFNLP RFN  Y     ++  P MIHRA+ GSIER
Sbjct: 55  FYGPKIDLKIVDSLEREWQMSTIQFDFNLPERFNMTYTAEDGKEKRPFMIHRALLGSIER 114

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           F GI++E++ G  PLWLSP+Q ++  + +   +YA ++ N  K+  + I+ D  +  +N 
Sbjct: 115 FFGILVEHYGGAFPLWLSPVQVVIIPVNNIVEDYAIKVFNKFKNEGIRIKLDNSSSRMNA 174

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           KIRE+  KKIP + I G++EA+E  I IR   +     + L +A+  +
Sbjct: 175 KIREYQAKKIPYMFIIGEREATEERISIRTRTNEQINGIKLDEALKFI 222


>gi|325973664|ref|YP_004250728.1| threonyl-tRNA synthetase [Mycoplasma suis str. Illinois]
 gi|323652266|gb|ADX98348.1| threonyl-tRNA synthetase [Mycoplasma suis str. Illinois]
          Length = 424

 Score =  173 bits (438), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 118/412 (28%), Positives = 201/412 (48%), Gaps = 18/412 (4%)

Query: 245 DHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEINTPQVLD 301
           DHR + +    F+ +++ GSG  FW  +G+K+ + +  Y+    +D      + TP +  
Sbjct: 16  DHRTVGKNKGFFYFSKEIGSGFSFWASEGYKLREIIKRYINDFQRDICGINLVQTPILGK 75

Query: 302 QHLWQQSGHWDSYRANMF-AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
             ++Q++GH   Y  N+F A+K      K+   + L+PM CP H+ +    + SY++LP 
Sbjct: 76  TEIYQKTGHLPLYDENIFPAMK------KEGEEWILRPMTCPHHILLAKEVIMSYKQLPY 129

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
            + E   ++R E SG L GL RVR     D H+F   E   +        + ++   F  
Sbjct: 130 LMGENSCLHRYEYSGGLLGLKRVRAMELIDTHIFVLPEHCKDMIKSSLEWVWTLLNKFRI 189

Query: 421 EKIMVKLSTRPEKR--VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
               + L+TR  K+  + S   W+  E I+         S    ++     GE AFYGPK
Sbjct: 190 RIKEIVLATRSSKQKYLISGDEWNQTEEILFSATKEWIASKNISVSLVRKEGEAAFYGPK 249

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSR--FNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
            ++   D+  +++   T+Q+D  +P +  F+  Y N +S   +P +IH  + G++ERFI 
Sbjct: 250 IDFNAVDSSNQEFTISTVQLDSQMPKKLEFSILYANQNS--INPWIIHLGLIGTLERFIA 307

Query: 537 IMIENFKGNLPLWLSPIQ-AIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++E++ G LP WL P Q +I+T    S+     E+     S+    + D R+E I+ KI
Sbjct: 308 YLLEDWGGKLPFWLLPTQISILTVRIDSSRHELNELIKKFSSYGFRAKLDLRDERISKKI 367

Query: 596 REHSIKKIPIIIICGDKEASERS-IGIRRFGSTTTQKVSLLDAIPILTKESL 646
                ++IP  II G+KE      I  R  G    +++S  D I  L++E +
Sbjct: 368 VNAVNERIPFQIIIGEKELQNLDLINFRELGKEGEKQLSFSDFINYLSQEEV 419


>gi|237842799|ref|XP_002370697.1| threonyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
 gi|211968361|gb|EEB03557.1| threonyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
          Length = 1223

 Score =  172 bits (436), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 137/501 (27%), Positives = 216/501 (43%), Gaps = 155/501 (30%)

Query: 242  EKRDHRKLAREMDLFHI--AED--GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
            E++DHR+L REM LF +  A D    G +F   +G ++   L S + +  +   ++++ T
Sbjct: 699  ERKDHRELGREMGLFVLPPASDVGAVGPVFLP-EGRQLLANLKSVLAQHQRLLQFQQVET 757

Query: 297  PQVLDQHLWQQSGHWDSYRANMFAVKCA-----------------------DDTIKDLRT 333
            P +    LW++SGHW  YR NM+ V  +                       D   KD  T
Sbjct: 758  PSLAQSGLWRRSGHWTHYRENMWTVSASPRDEEKEKEENGDKPRDATASSLDPEAKDSPT 817

Query: 334  --------------------------------FALKPMNCPGHVA-VFNHGLKSY----- 355
                                             +LKPM+CP H++ VF + L +      
Sbjct: 818  GGKRDSEEEREEERRREIENEGGDQQKDSVFRLSLKPMSCPLHLSYVFPYLLVTSSSPRH 877

Query: 356  ------------------------------RELPVRLAEFGSVYRNEPSGSLHGLMRVRG 385
                                          R LP+R++EFG V+R E   +L GL R+R 
Sbjct: 878  DVSLSTSPSPVTSKEEGALERETRAKAEVSRHLPLRISEFGRVFRRERRSALCGLFRLRE 937

Query: 386  FTQDDAHVFCTKEQMFNECLKIHNLIISIY-KDFGF--EKIMVKLSTRPEKRV-GSDA-- 439
            FTQDD H+ CT+EQ   E       I+ +Y + FG   E + V L +RP K    SDA  
Sbjct: 938  FTQDDGHILCTREQAVEEIKVQLASILHLYVQVFGISPEGVKVSLGSRPAKASRRSDASA 997

Query: 440  ------LWDDAEN-IMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
                  LW  AE  +++   + + N+S          G GAFYGPK ++ L D  GR WQ
Sbjct: 998  DSEDEKLWTQAEAWLLEAAREVLPNASSVETEE----GGGAFYGPKLDFSLSDVQGRWWQ 1053

Query: 493  CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
             GT+Q                       V+IHRA  GS+ERF+ +++E   G+LP+WL+P
Sbjct: 1054 TGTLQPL---------------------VLIHRAAVGSLERFLALLLELRNGDLPVWLAP 1092

Query: 553  IQAIVTTITSSA---VEYAQEIANLLKSH----------------HLSIETDFRNETINY 593
            ++A+V  ++  +    EYA+ +A +L+                     +  D R   +N 
Sbjct: 1093 VKAVVCPVSVQSREIREYAERVATVLRESVAPSGFSAEKEGSEDTATGVFVDLRPLHLNT 1152

Query: 594  KIRE-HSIKKIPIIIICGDKE 613
            K+++    ++IP++ + G ++
Sbjct: 1153 KLKDLLGRRRIPLLFLVGPRD 1173


>gi|221485669|gb|EEE23950.1| threonyl-tRNA synthetase, putative [Toxoplasma gondii GT1]
          Length = 1151

 Score =  171 bits (432), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 131/447 (29%), Positives = 197/447 (44%), Gaps = 138/447 (30%)

Query: 242  EKRDHRKLAREMDLFHI--AED--GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
            E++DHR+L REM LF +  A D    G +F   +G ++   L S + +  +   ++++ T
Sbjct: 695  ERKDHRELGREMGLFVLPPASDVGAVGPVFLP-EGRQLLANLKSVLAQHQRLLQFQQVET 753

Query: 297  PQVLDQHLWQQSGHWDSYRANMFAVKCA-----------------------DDTIKDLRT 333
            P +    LW++SGHW  YR NM+ V  +                       D   KD  T
Sbjct: 754  PSLAQSGLWRRSGHWTHYRENMWTVSASPRDEEKEKEESGDKPRDATASNLDPEAKDSPT 813

Query: 334  --------------------------------FALKPMNCPGHVA-VFNHGLKSY----- 355
                                             +LKPM+CP H++ VF + L +      
Sbjct: 814  GGKRDSEEEREEERRREIENEGGDQQKDSVFRLSLKPMSCPLHLSYVFPYLLVTSSSPRH 873

Query: 356  ------------------------------RELPVRLAEFGSVYRNEPSGSLHGLMRVRG 385
                                          R LP+R++EFG V+R E   +L GL R+R 
Sbjct: 874  DVSLSTSPSPVTSKEEGALERETRAKAEVSRHLPLRISEFGRVFRRERRSALCGLFRLRE 933

Query: 386  FTQDDAHVFCTKEQMFNECLKIHNLIISIY-KDFGF--EKIMVKLSTRPEKRV-GSDA-- 439
            FTQDD H+ CT+EQ   E       I+ +Y + FG   E + V L +RP K    SDA  
Sbjct: 934  FTQDDGHILCTREQAVEEIKVQLASILHLYVQVFGISPECVKVSLGSRPAKASRRSDASA 993

Query: 440  ------LWDDAEN-IMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
                  LW  AE  +M+   + + N+S          G GAFYGPK ++ L D  GR WQ
Sbjct: 994  DSEDEKLWTQAEAWLMEAAREVLPNASSVETEE----GGGAFYGPKLDFSLSDVQGRWWQ 1049

Query: 493  CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
             GT+Q                       V+IHRA  GS+ERF+ +++E   G+LP+WL+P
Sbjct: 1050 TGTLQPL---------------------VLIHRAAVGSLERFLALLLELRNGDLPVWLAP 1088

Query: 553  IQAIVTTITSSA---VEYAQEIANLLK 576
            ++A+V  ++  +    EYA+ +A +L+
Sbjct: 1089 VKAVVCPVSVQSREIREYAERVATVLR 1115


>gi|301303992|ref|ZP_07210110.1| threonyl and Alanyl tRNA synthetase second additional domain
           protein [Escherichia coli MS 124-1]
 gi|300840789|gb|EFK68549.1| threonyl and Alanyl tRNA synthetase second additional domain
           protein [Escherichia coli MS 124-1]
          Length = 209

 Score =  168 bits (426), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 81/191 (42%), Positives = 124/191 (64%), Gaps = 3/191 (1%)

Query: 25  DVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIRHSCAHIMAE 83
           DVA  I   LAK  +A  +NG++ D  D +  +  + IIT +D   L +IRHSCAH++  
Sbjct: 2   DVALDIGPGLAKACIAGRVNGELVDACDLIENDAQLSIITAKDEEGLEIIRHSCAHLLGH 61

Query: 84  AVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSH 143
           A++ +WP  ++AIGP+I++GFYYD D ++  + +++  +EK+M E+  ++   +K+ +S 
Sbjct: 62  AIKQLWPHTKMAIGPVIDNGFYYDVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVSW 121

Query: 144 EKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMK 202
            +ARE F ++ E+YKV IL E+I   +   LY   E+ D+CRGPHV +  +    FKLMK
Sbjct: 122 HEARETFANRGESYKVSILDENIAHDDKPGLYFHEEYVDMCRGPHVPNM-RFCHHFKLMK 180

Query: 203 VAGAYWRGDSN 213
            AGAYWRGDSN
Sbjct: 181 TAGAYWRGDSN 191


>gi|121728093|ref|ZP_01681130.1| threonyl-tRNA synthetase [Vibrio cholerae V52]
 gi|121629641|gb|EAX62062.1| threonyl-tRNA synthetase [Vibrio cholerae V52]
          Length = 208

 Score =  167 bits (424), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 86/206 (41%), Positives = 131/206 (63%), Gaps = 4/206 (1%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS ++F    +  +VA+SI   LAK  +A  +NG   D  D +  + S+EIIT +
Sbjct: 4   ITLPDGSQRHFDNPVSTLEVAQSIGPGLAKATIAGRVNGARVDACDLIEHDASLEIITTK 63

Query: 66  DP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  A++ ++P  ++AIGP I+ GFYYD D EQ  S ++L +IE 
Sbjct: 64  DEVDGLEIVRHSCAHLLGHALKQLYPNAKMAIGPTIDSGFYYDIDLEQSLSQEDLEKIEA 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLC 183
           +M E+       +K+ +S ++AR+ FES+ E+YK+EIL E++   +   LY   E+ D+C
Sbjct: 124 RMVELAKTKYAVVKKKVSWQEARDTFESRGESYKMEILDENVARDDRPGLYHHEEYIDMC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWR 209
           RGPHV   G  +  FKL+ +AGAYWR
Sbjct: 184 RGPHVPHMGFCQN-FKLLNIAGAYWR 208


>gi|118566325|gb|ABL01534.1| tRNA synthetase [Mycosphaerella fijiensis]
          Length = 182

 Score =  167 bits (424), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 81/189 (42%), Positives = 121/189 (64%), Gaps = 8/189 (4%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQ 302
           RDHRK+ ++ +LF   +   G  F+   G  I+ +L++Y++ +  +  Y+E+ +P + + 
Sbjct: 1   RDHRKIGQDQELFFFHQMSPGSAFFLPHGMIIYNSLMAYLKEEYWRRGYQEVASPNMYNS 60

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+QSGHW  Y  +MF      D       +ALKPMNCPGH  +F H  +SYRELP+R+
Sbjct: 61  ALWKQSGHWQHYHEDMFTFDVEKDK------WALKPMNCPGHCLLFAHRERSYRELPMRI 114

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           A+FG ++RNE SG+L GL RVR F QDD H+FCT+ Q+  E   + + ++++Y  FGF K
Sbjct: 115 ADFGILHRNEASGALTGLTRVRRFQQDDTHIFCTEAQIEQEINGLFDFMMAVYGRFGF-K 173

Query: 423 IMVKLSTRP 431
             +KLSTRP
Sbjct: 174 FRMKLSTRP 182


>gi|92111808|gb|ABE73648.1| threonyl-tRNA synthetase [Streptococcus salivarius]
          Length = 165

 Score =  167 bits (423), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 77/168 (45%), Positives = 124/168 (73%), Gaps = 5/168 (2%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQIEKKMQE 128
           L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D E    S+++L++IE++M++
Sbjct: 1   LPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNEAGQISNEDLSRIEEEMKK 60

Query: 129 IIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKE-NVTLYRQGEWFDLCRGPH 187
           I+  + P +++ ++ ++ARE+F  K + YK+E++E     E  +T+YRQGE+ DLCRGPH
Sbjct: 61  IVKENFPSIREEVTKDEAREIF--KNDPYKLELIEEHSEDEGGLTIYRQGEYVDLCRGPH 118

Query: 188 VRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
           V STG++ + F L+ VAGAYWRG+S+  M+ RIYGTAW  +++L  YL
Sbjct: 119 VPSTGRI-QVFHLLNVAGAYWRGNSDNAMMQRIYGTAWFDKKDLKAYL 165


>gi|256070953|ref|XP_002571806.1| threonyl-tRNA synthetase [Schistosoma mansoni]
 gi|238656954|emb|CAZ28036.1| threonyl-tRNA synthetase, putative [Schistosoma mansoni]
          Length = 563

 Score =  167 bits (423), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 95/289 (32%), Positives = 151/289 (52%), Gaps = 10/289 (3%)

Query: 32  RSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWP 90
           ++LA+ AV   +NG++ DL  P  +  S+EI   +      V  HS AH++ EA++  + 
Sbjct: 41  KTLAEHAVIAKVNGELWDLLRPFEKNSSLEIYNFDHKDGQYVFWHSSAHVLGEALERCY- 99

Query: 91  EVQVAIGPIIEDGFYYDF----DKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKA 146
              +  GP IE+GFYYD      +      ++L+ +E     I   + PF +  +  E  
Sbjct: 100 SGHLCYGPPIEEGFYYDMWVPNQQHSGLRPEDLSIVENVCHSICKENQPFERLEMKKEDL 159

Query: 147 RELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGA 206
            ++F   +  +K  I+         T+YR G   DLCRGPHVR TG +K    + K + +
Sbjct: 160 LKMFAYNE--FKCRIIHEKIDTPTTTVYRCGPLIDLCRGPHVRHTGCIKAL-SVTKCSSS 216

Query: 207 YWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVI 266
           YW G ++   L R+YG ++   + L ++ +  EE+ KRDHRKL  E  LF   E   G  
Sbjct: 217 YWEGRTDAETLQRVYGVSFPDPKRLKEWKHIQEEAAKRDHRKLGVEQKLFFFHELSPGSC 276

Query: 267 FWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSY 314
           F+   G  I+ TL+S++R +  K  ++E+ TP + +  LW+QSGHW  Y
Sbjct: 277 FFLPAGAHIYNTLVSFIRSEYWKRGFQEVITPNIYNSALWEQSGHWQHY 325



 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 66/187 (35%), Positives = 99/187 (52%), Gaps = 35/187 (18%)

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFY------------------- 510
           G+GAFYGPK +  + DA+ R  QC TIQ+DF LP RFN  Y                   
Sbjct: 344 GDGAFYGPKIDINIMDALRRRHQCATIQLDFQLPVRFNLSYASETDNPSGSDNNCNNISN 403

Query: 511 ----VNSHSEKCH---------PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIV 557
               +++H E  +         PV+IHRA+ GS+ER I I+ E++ G  P WLSP Q +V
Sbjct: 404 TTNGISNHHEPINHQTDLNTHRPVIIHRAILGSVERIIAILTESYGGKWPFWLSPRQVLV 463

Query: 558 TTITSSAVEYAQEIANLLK--SHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEAS 615
             + S+  EYA ++ N L      +S++TD    T+N KIR   + +   I++ G+KE +
Sbjct: 464 VPVVSACDEYAIDVKNRLHDAGFMVSVDTD-PGRTLNKKIRNGQLLQNNFILVVGEKEIA 522

Query: 616 ERSIGIR 622
             ++ +R
Sbjct: 523 NGTVNVR 529


>gi|92111782|gb|ABE73635.1| threonyl-tRNA synthetase [Streptococcus salivarius]
 gi|92111784|gb|ABE73636.1| threonyl-tRNA synthetase [Streptococcus salivarius]
 gi|92111788|gb|ABE73638.1| threonyl-tRNA synthetase [Streptococcus salivarius]
 gi|92111790|gb|ABE73639.1| threonyl-tRNA synthetase [Streptococcus salivarius]
 gi|92111792|gb|ABE73640.1| threonyl-tRNA synthetase [Streptococcus salivarius]
 gi|92111794|gb|ABE73641.1| threonyl-tRNA synthetase [Streptococcus salivarius]
 gi|92111796|gb|ABE73642.1| threonyl-tRNA synthetase [Streptococcus salivarius]
 gi|92111798|gb|ABE73643.1| threonyl-tRNA synthetase [Streptococcus salivarius]
 gi|92111800|gb|ABE73644.1| threonyl-tRNA synthetase [Streptococcus salivarius]
 gi|92111802|gb|ABE73645.1| threonyl-tRNA synthetase [Streptococcus salivarius]
 gi|92111804|gb|ABE73646.1| threonyl-tRNA synthetase [Streptococcus salivarius]
 gi|92111806|gb|ABE73647.1| threonyl-tRNA synthetase [Streptococcus salivarius]
 gi|92111814|gb|ABE73651.1| threonyl-tRNA synthetase [Streptococcus salivarius]
 gi|92111816|gb|ABE73652.1| threonyl-tRNA synthetase [Streptococcus vestibularis]
 gi|92111818|gb|ABE73653.1| threonyl-tRNA synthetase [Streptococcus vestibularis]
 gi|92111820|gb|ABE73654.1| threonyl-tRNA synthetase [Streptococcus salivarius]
          Length = 165

 Score =  166 bits (421), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 77/168 (45%), Positives = 123/168 (73%), Gaps = 5/168 (2%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQIEKKMQE 128
           L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D E    S+++L +IE++M++
Sbjct: 1   LPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNEAGQISNEDLPRIEEEMKK 60

Query: 129 IIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKE-NVTLYRQGEWFDLCRGPH 187
           I+  + P +++ ++ ++ARE+F  K + YK+E++E     E  +T+YRQGE+ DLCRGPH
Sbjct: 61  IVKENFPSIREEVTKDEAREIF--KNDPYKLELIEEHSEDEGGLTIYRQGEYVDLCRGPH 118

Query: 188 VRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
           V STG++ + F L+ VAGAYWRG+S+  M+ RIYGTAW  +++L  YL
Sbjct: 119 VPSTGRI-QVFHLLNVAGAYWRGNSDNAMMQRIYGTAWFDKKDLKAYL 165


>gi|92111786|gb|ABE73637.1| threonyl-tRNA synthetase [Streptococcus vestibularis]
 gi|92111810|gb|ABE73649.1| threonyl-tRNA synthetase [Streptococcus salivarius]
 gi|92111822|gb|ABE73655.1| threonyl-tRNA synthetase [Streptococcus vestibularis]
          Length = 165

 Score =  165 bits (418), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 76/168 (45%), Positives = 123/168 (73%), Gaps = 5/168 (2%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQIEKKMQE 128
           L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D +    S+++L +IE++M++
Sbjct: 1   LPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNQAGQISNEDLPRIEEEMKK 60

Query: 129 IIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKE-NVTLYRQGEWFDLCRGPH 187
           I+  + P +++ ++ ++ARE+F  K + YK+E++E     E  +T+YRQGE+ DLCRGPH
Sbjct: 61  IVKENFPSIREEVTKDEAREIF--KNDPYKLELIEEHSEDEGGLTIYRQGEYVDLCRGPH 118

Query: 188 VRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
           V STG++ + F L+ VAGAYWRG+S+  M+ RIYGTAW  +++L  YL
Sbjct: 119 VPSTGRI-QVFHLLNVAGAYWRGNSDNAMMQRIYGTAWFDKKDLKAYL 165


>gi|220961898|gb|ACL93386.1| threonyl-tRNA synthetase [Streptococcus thermophilus]
          Length = 165

 Score =  164 bits (416), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 75/168 (44%), Positives = 123/168 (73%), Gaps = 5/168 (2%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQIEKKMQE 128
           L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D +    S+++L +IE++M++
Sbjct: 1   LPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNQSGQISNEDLPRIEEEMKK 60

Query: 129 IIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKE-NVTLYRQGEWFDLCRGPH 187
           I+  + P +++ ++ ++ARE+F  K + YK+E++E     +  +T+YRQGE+ DLCRGPH
Sbjct: 61  IVKENFPSIREEVTKDEAREIF--KNDPYKLELIEEHSEDDGGLTIYRQGEYVDLCRGPH 118

Query: 188 VRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
           V STG++ + F L+ VAGAYWRG+S+  M+ RIYGTAW  +++L  YL
Sbjct: 119 VPSTGRI-QIFHLLNVAGAYWRGNSDNAMMQRIYGTAWFDKKDLKAYL 165


>gi|92111812|gb|ABE73650.1| threonyl-tRNA synthetase [Streptococcus salivarius]
          Length = 165

 Score =  164 bits (416), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 76/168 (45%), Positives = 122/168 (72%), Gaps = 5/168 (2%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQIEKKMQE 128
           L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D +    S+++L +IE++M++
Sbjct: 1   LPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNQAGQISNEDLPRIEEEMKK 60

Query: 129 IIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKE-NVTLYRQGEWFDLCRGPH 187
           I+  + P +++ ++ ++ARE+F  K + YK+E++E     E  +T+YRQGE+ DLCRGPH
Sbjct: 61  IVKENFPSIREEVTKDEAREIF--KNDPYKLELIEEHSEDEGGLTIYRQGEYVDLCRGPH 118

Query: 188 VRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
           V STG++ + F L+ VAGAYWRG+S   M+ RIYGTAW  +++L  YL
Sbjct: 119 VPSTGRI-QVFHLLNVAGAYWRGNSENAMMQRIYGTAWFDKKDLKSYL 165


>gi|220961890|gb|ACL93382.1| threonyl-tRNA synthetase [Streptococcus thermophilus]
 gi|220961894|gb|ACL93384.1| threonyl-tRNA synthetase [Streptococcus thermophilus]
 gi|220961896|gb|ACL93385.1| threonyl-tRNA synthetase [Streptococcus thermophilus]
          Length = 165

 Score =  164 bits (415), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 75/168 (44%), Positives = 123/168 (73%), Gaps = 5/168 (2%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQIEKKMQE 128
           L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D +    S+++L +IE++M++
Sbjct: 1   LPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNQAGQISNEDLPRIEEEMKK 60

Query: 129 IIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKE-NVTLYRQGEWFDLCRGPH 187
           I+  + P +++ ++ ++ARE+F  K + YK+E++E     +  +T+YRQGE+ DLCRGPH
Sbjct: 61  IVKENFPSIREEVTKDEAREIF--KNDPYKLELIEEHSEDDGGLTIYRQGEYVDLCRGPH 118

Query: 188 VRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
           V STG++ + F L+ VAGAYWRG+S+  M+ RIYGTAW  +++L  YL
Sbjct: 119 VPSTGRI-QIFHLLNVAGAYWRGNSDNAMMQRIYGTAWFDKKDLKAYL 165


>gi|220961892|gb|ACL93383.1| threonyl-tRNA synthetase [Streptococcus thermophilus]
          Length = 165

 Score =  163 bits (413), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 75/168 (44%), Positives = 122/168 (72%), Gaps = 5/168 (2%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQIEKKMQE 128
           L ++RHS AH+ A+A + ++P++   +GP IEDGFYYD D +    S+++L +IE++M++
Sbjct: 1   LPILRHSAAHLFAQAARRLFPDIHFGVGPAIEDGFYYDTDNQAGQISNEDLPRIEEEMKK 60

Query: 129 IIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKE-NVTLYRQGEWFDLCRGPH 187
           I+  + P +++ ++ ++ARE+F  K + YK+E++E     +  +T+YRQGE+ DLCRGPH
Sbjct: 61  IVKENFPSIREEVTKDEAREIF--KNDPYKLELIEEHSEDDGGLTIYRQGEYVDLCRGPH 118

Query: 188 VRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
           V STG++ + F L+ VAGAYWRG+S+  M+ RIYGTAW  +++L  YL
Sbjct: 119 VPSTGRI-QIFHLLNVAGAYWRGNSDNAMMQRIYGTAWFDKKDLKAYL 165


>gi|213022828|ref|ZP_03337275.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 167

 Score =  160 bits (406), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 69/156 (44%), Positives = 101/156 (64%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPL 548
           R WQCGT+Q+DF+LPSR +A YV   +E+  PVMIHRA+ GS+ERFIGI+ E F G  P 
Sbjct: 1   RAWQCGTVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAGFFPT 60

Query: 549 WLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIII 608
           WL+P+Q +V  IT S  EY  E+   L++  + ++ D RNE I +KIREH+++++P +++
Sbjct: 61  WLAPVQVVVMNITDSQSEYVNELTQKLQNAGIRVKADLRNEKIGFKIREHTLRRVPYMLV 120

Query: 609 CGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           CGDKE     + +R         + + D I  L +E
Sbjct: 121 CGDKEVEAGKVAVRTRRGKDLGSLDVNDVIEKLQQE 156


>gi|163785549|ref|ZP_02180122.1| threonyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159879181|gb|EDP73112.1| threonyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 222

 Score =  159 bits (401), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 78/188 (41%), Positives = 123/188 (65%), Gaps = 5/188 (2%)

Query: 36  KKAVAVAINGKVCDLSDPVRE-GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIW--PEV 92
           K  V   +N ++ D+  P+R+ G++  +TP+D  SL ++RHS AHIMA+A++ ++   +V
Sbjct: 35  KNVVGGVLNDEIIDVHTPIRQSGNLRFLTPKDKESLEILRHSLAHIMAQALKELYGTDKV 94

Query: 93  QVAIGPIIEDGFYYDFDKE-QPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFE 151
            + IGP  + GF+YD + E +  + ++L  IE+KM+EII RD    +Q L  E+A +LFE
Sbjct: 95  HLGIGPTTDVGFFYDVEVEGKRLTEEDLPVIEEKMKEIIQRDCLIERQELPREEALQLFE 154

Query: 152 SKKEAYKVEILE-SIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRG 210
           + KE YKV+++   IP    +++Y+Q ++ DLCRGPH+ STG+    FKL  +AGAYW+G
Sbjct: 155 NMKEIYKVDLIRHDIPETAPISIYKQCDFVDLCRGPHIPSTGKAPTSFKLFSIAGAYWKG 214

Query: 211 DSNRPMLS 218
               PML 
Sbjct: 215 KETNPMLQ 222


>gi|330977709|gb|EGH77612.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. aptata str. DSM
           50252]
          Length = 174

 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 64/142 (45%), Positives = 99/142 (69%)

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           + LKD +GR WQCGT+Q+DFNLP R +A YV+  + + +PVM+HRA+ GS ERFIGI+IE
Sbjct: 1   FCLKDCLGRVWQCGTLQLDFNLPIRLSAEYVSEDNSRKNPVMLHRAILGSFERFIGILIE 60

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +++G  P WL+P QA++  IT    ++A E+   L       ++D RNE I +KIREH++
Sbjct: 61  HYEGAFPAWLAPTQAVIMNITDKQADFALEVEKTLAESGFRAKSDLRNEKIGFKIREHTL 120

Query: 601 KKIPIIIICGDKEASERSIGIR 622
            K+P +++ GD+E   +++ +R
Sbjct: 121 LKVPYLLVIGDREVEMQTVAVR 142


>gi|46446335|ref|YP_007700.1| putative threonine-tRNA ligase [Candidatus Protochlamydia
           amoebophila UWE25]
 gi|46399976|emb|CAF23425.1| putative threonine-tRNA ligase [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 553

 Score =  157 bits (397), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 129/534 (24%), Positives = 239/534 (44%), Gaps = 43/534 (8%)

Query: 103 GFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL 162
           GFYYDF  +Q   ++ ++ IE  ++ +I  + P     +  E A+ LF+   + +  E+ 
Sbjct: 9   GFYYDFIFQQKVDNNLVSLIEVHLKTLIKENHPIQALSMMRENAQALFDHHDQPFLAEL- 67

Query: 163 ESIPAKENVTLYRQ-GEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIY 221
            +   +EN+    Q  +++ LC  P + ST ++    KL+++       +    +++R+ 
Sbjct: 68  -AGEKEENIVEILQFKQFYGLCSFPLISSTEEIG-VVKLLELDFRQEEREGETLVVTRLL 125

Query: 222 GTAWNTQQELTQYLYFLEE-SEKRDHRKLAREMDLFHIAEDGSGV-IFWHRKGWKIFQTL 279
           GT++   Q+L Q+L   +   +K+DHR+L  +++LF   E  + +   WH KG  +   L
Sbjct: 126 GTSFPDNQKLKQFLKLYDSYRKKKDHRQLGSDLNLFSFPEKLTALECVWHPKGNLLLMLL 185

Query: 280 ISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALK 337
             ++ ++      +E +NTP V++ H ++            F V            +   
Sbjct: 186 KEWVTKEFSKIGKWEPVNTPYVVNSHFFK------------FNVDYLPTVEMGTEEYVFS 233

Query: 338 PMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK 397
           P     H  +F    K   +LP+   E+   Y         GL    G++ D + +F + 
Sbjct: 234 PSPLIQHHYLFKRKKKDSSDLPIHFFEWAKKYVLSTHPLKEGLFNAVGWSGDFSTIFSSD 293

Query: 398 EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE--KRVGSDALWDDAENIMKGVLDTI 455
           EQ+  E +     I  I + FGFE     +++R +  K     A  D  E I+   L T+
Sbjct: 294 EQLNQEFISSLQFIEQIIRIFGFEARWCLVTSRQKSFKFRQEKAAIDRIEKILS--LCTL 351

Query: 456 KNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN--- 512
               QD              GP+ E  + D IGR+W    + +        +  Y+    
Sbjct: 352 SYPLQDE-----HFESDCLEGPRLELRVADEIGREWVISALTL-------ISIHYLKKDK 399

Query: 513 ---SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQ 569
                +E   P +I R ++ S++R I ++IE F+G+ PLWL+P Q  +  +   ++ YA+
Sbjct: 400 TEKQENEITIPFVIVRQIWESLDRLIALLIERFEGSFPLWLAPEQVRILAVGEGSLSYAR 459

Query: 570 EIANLLKSHHLSIETDFRNET-INYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           +I    +S  L +  DF+  T +  KI     +K+P ++I G++E    +I  R
Sbjct: 460 QIETRCRSQGLRVGVDFKKSTKLGEKIHLAEKEKVPYLLIIGEQEIKRNAITFR 513


>gi|167948462|ref|ZP_02535536.1| threonyl-tRNA synthetase [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 170

 Score =  157 bits (396), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 68/160 (42%), Positives = 106/160 (66%), Gaps = 6/160 (3%)

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           + L+D + R WQ GTIQ+DF++P R  A Y+   + K  PVM+HRAV GS+ERFIGI+IE
Sbjct: 1   FSLRDCLERVWQLGTIQLDFSMPERLGAHYIAEDNSKQVPVMLHRAVLGSLERFIGILIE 60

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           ++ G++PLWLSP+Q +V  IT    +YA+     L+     +E+D RNE I +KIREH++
Sbjct: 61  HYAGSMPLWLSPVQVVVMNITDRQAKYAENSVKALREAGFRVESDLRNEKIGFKIREHTL 120

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
            ++P +++ GD+E  + S+ +R      T+K   L ++P+
Sbjct: 121 MRVPYLLVVGDREMEQGSLAVR------TRKGEDLGSMPL 154


>gi|326675882|ref|XP_002665325.2| PREDICTED: probable threonyl-tRNA synthetase 2, cytoplasmic,
           partial [Danio rerio]
          Length = 464

 Score =  156 bits (395), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 84/216 (38%), Positives = 124/216 (57%), Gaps = 9/216 (4%)

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
           + + S+Y  FGF    + LSTRP+K +G +ALW+ AE  ++  L+        ++N G  
Sbjct: 222 DFLRSVYSVFGFS-FQLHLSTRPQKFLGDEALWNQAEKQLENSLNEFGEPW--KLNPG-- 276

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE-KCHPVMIHRAV 527
             +GAFYGPK +  +KDAIGR  QC TIQ+DF LP RFN  YV    + +  PV+IHRA+
Sbjct: 277 --DGAFYGPKIDINIKDAIGRYHQCATIQLDFQLPIRFNLTYVGKDGDDRDRPVIIHRAI 334

Query: 528 FGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR 587
            GS+ER I I+ EN+ G  PLWLSP Q ++  +  S  EYA+++           + D  
Sbjct: 335 LGSVERMIAILTENYAGKWPLWLSPRQVMLVPVNPSLEEYAKQVCKRFVEAGFMADADLD 394

Query: 588 NET-INYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           +   +N KIR   + +   I++ G+KE    S+ +R
Sbjct: 395 SSCLLNKKIRNAQLAQYNFILVVGEKERLSNSVNVR 430



 Score =  135 bits (339), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 85/286 (29%), Positives = 143/286 (50%), Gaps = 27/286 (9%)

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
           SS E + +E   + I+    PF +  +  E   E+F+  K  +K  IL      +  T+Y
Sbjct: 3   SSTEFSDLELICRNIMKEKQPFERLEVKKETLLEMFKYNK--FKCRILNEKVTTDTTTVY 60

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
           R G   DLCRGPHVR TG++K F K+ K +  YW G S+   L RIYG ++   + L ++
Sbjct: 61  RCGPLIDLCRGPHVRHTGKIKAF-KIYKNSSTYWEGRSDMETLQRIYGISFPDSKMLKEW 119

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEE 293
             F EE++ RDHRK+ ++ +LF   +   G  F+  +G  I+ TL+ ++R +  +  ++E
Sbjct: 120 ERFQEEAKSRDHRKIGKDQELFFFHDLSPGSCFFLPRGAFIYNTLMDFIRGEYSRRGFQE 179

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMF----------AVKCADDTIKDLRT---------F 334
           + TP + +  LW+ SGHW  Y  ++            +K   D ++ + +          
Sbjct: 180 VATPNIYNSRLWETSGHWQLYTQSILESGQKLSIGSEMKGCLDFLRSVYSVFGFSFQLHL 239

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS-GSLHG 379
           + +P    G  A++N   K   +L   L EFG  ++  P  G+ +G
Sbjct: 240 STRPQKFLGDEALWNQAEK---QLENSLNEFGEPWKLNPGDGAFYG 282


>gi|39884|emb|CAA28636.1| unnamed protein product [Bacillus subtilis]
          Length = 180

 Score =  155 bits (392), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 72/180 (40%), Positives = 122/180 (67%), Gaps = 1/180 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSI 59
           M   +K+TFPDG++K F    T  D+A SIS  L KK++A  +NGK  DL  P+ E G++
Sbjct: 1   MSDMVKITFPDGAVKEFAKGTTTEDIAASISPGLKKKSLAGKLNGKEIDLRTPINEDGTV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT      L ++RHS AH++A+A++ I+ +V+  +GP+IE+GFYYD + ++  + ++L
Sbjct: 61  EIITEGSEEGLQIMRHSAAHLLAQAIKRIYKDVKFGVGPVIENGFYYDVEMDEAITPEDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IEK+M++I+  + P +++ +S E+A+  F    +  K+E+L++IP  E V++Y QGE+
Sbjct: 121 PKIEKEMKKIVNANLPIVRKEVSREEAKARFAEIGDDLKLELLDAIPEGETVSIYEQGEF 180


>gi|213023484|ref|ZP_03337931.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 149

 Score =  154 bits (390), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 74/150 (49%), Positives = 102/150 (68%), Gaps = 3/150 (2%)

Query: 157 YKVEIL-ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRP 215
           YKV IL E+I   +   LY   E+ D+CRGPHV +  +    FKLMK AGAYWRGDSN  
Sbjct: 1   YKVSILDENIAHDDKPGLYHHEEYVDMCRGPHVPNM-RFCHHFKLMKTAGAYWRGDSNNK 59

Query: 216 MLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKI 275
           ML RIYGTAW  ++ L  YL  LEE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW I
Sbjct: 60  MLQRIYGTAWADKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTI 119

Query: 276 FQTLISYMRRKIKD-DYEEINTPQVLDQHL 304
           F+ L  ++R K+K+  Y+E+  P ++D+ L
Sbjct: 120 FRELEVFVRSKLKEYQYQEVKGPFMMDRVL 149


>gi|145532881|ref|XP_001452193.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124419876|emb|CAK84796.1| unnamed protein product [Paramecium tetraurelia]
          Length = 428

 Score =  152 bits (384), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 81/283 (28%), Positives = 156/283 (55%), Gaps = 6/283 (2%)

Query: 47  VCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY 105
           + DL+ P+  +  +E+++ +D     V  HS +HI+  A++ ++    + IGP I+ GF+
Sbjct: 132 IWDLTRPLEGDCQLELLSFDDNNGKEVFWHSSSHILGSALEEVYG-CHLCIGPAIDGGFF 190

Query: 106 YD-FDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES 164
           YD +  +   + ++  +IEK   ++ A    F +  L+ ++  ELF +     ++ I   
Sbjct: 191 YDCYIGDYKVTQNDYVKIEKAASDLAASKQEFQRAVLTKDECLELFGTNPFKRQL-ITNK 249

Query: 165 IPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTA 224
           IP     T Y+ G   DLC GPH+ +T  VK F ++ K + AYW G +    L R+YG +
Sbjct: 250 IPEGAMTTAYKCGNLIDLCTGPHLPNTSYVKAF-QVTKNSAAYWLGKNTNDDLQRVYGVS 308

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR 284
           + +++ L +Y+   +E   RDHR + ++ +L+   +   G  F++  G  I+ TL++++R
Sbjct: 309 FPSKKLLDEYVKIQKELALRDHRNVGKKQNLYLFHQLSPGSAFFYPSGAHIYNTLMNFLR 368

Query: 285 RKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADD 326
           R+     Y+E+ +P + +  LW+ SGH+D Y+ N+F +   ++
Sbjct: 369 RQYYIRGYQEVISPNIFNAQLWKISGHYDKYKENLFFINMGEE 411


>gi|255027702|ref|ZP_05299688.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL J2-003]
          Length = 204

 Score =  151 bits (382), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 73/196 (37%), Positives = 118/196 (60%), Gaps = 7/196 (3%)

Query: 440 LWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVD 499
           +W+ A+ ++K  +D ++      ++     GE AFYGPK +  +K AIG++    T+Q+D
Sbjct: 1   MWEKAQAMLKSAMDEME------MDYFEAEGEAAFYGPKLDVQVKTAIGKEETLSTVQLD 54

Query: 500 FNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTT 559
           F LP RF+  Y+    EK  PV+IHR V  ++ERF+  +IE +KG  P WL+P+Q  +  
Sbjct: 55  FLLPERFDLTYIGEDGEKHRPVVIHRGVVSTMERFVAYLIEEYKGAFPTWLAPVQMEIIP 114

Query: 560 ITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERS 618
           + + A ++YA+ + + L+   L  E D RNE + YKIRE   KKIP  ++ GD+E    S
Sbjct: 115 VNADAHLDYAKGVQDKLQRAGLRAEVDDRNEKLGYKIREAQTKKIPYALVLGDQEVEAGS 174

Query: 619 IGIRRFGSTTTQKVSL 634
           + +RR+GS  ++ + L
Sbjct: 175 VNVRRYGSKDSETMDL 190


>gi|325120136|emb|CBZ55690.1| putative threonyl-tRNA synthetase [Neospora caninum Liverpool]
          Length = 608

 Score =  150 bits (380), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 104/337 (30%), Positives = 155/337 (45%), Gaps = 76/337 (22%)

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           R LP+R++EFG V+R E   +L GL R+R FTQDD H+ CT+ Q   E     + I+ +Y
Sbjct: 212 RHLPLRISEFGRVFRRERRSALCGLFRLREFTQDDGHILCTRSQAVGEITSQLSSILQLY 271

Query: 416 -KDFGF--EKIMVKLSTRPEK---------RVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            + FG   E I V L TRP K            + ALW +AE+ +   LD       +  
Sbjct: 272 FRVFGIAPELIKVSLGTRPAKASTLPAGAADSANAALWREAESWL---LDAAARVLPENF 328

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-------- 515
                 G GAFYGPK ++ L DA GR WQ GTIQVD   P      +   HS        
Sbjct: 329 KVEREEGGGAFYGPKLDFSLPDARGRRWQTGTIQVDLLQPPGLERVFSRRHSTLYPSPPS 388

Query: 516 ---------------------------EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPL 548
                                           V+IHRA  GS+ERF+ +++E   G LPL
Sbjct: 389 SSSSPSSSSRSPASFSRSPSSPSSLPSSCLPLVLIHRAAVGSLERFLALLLELRNGELPL 448

Query: 549 WLSPIQAIVTTITSSAVE---YAQEIANLLK--------------------SHHLSIETD 585
           W++P++A V  ++  + E   YAQ++A LL+                    +    +  D
Sbjct: 449 WIAPVKAAVCPVSVHSRESQHYAQKVARLLRRSLDSSGAFEKEEIEERGEQASTSGVLVD 508

Query: 586 FRNETINYKIRE-HSIKKIPIIIICGDKEASERSIGI 621
            R   +N K+++    ++IP++ + G +E  E++ G+
Sbjct: 509 LRPLHLNTKLKDLLGRRRIPLLFLVGPRE--EKTEGV 543



 Score = 43.5 bits (101), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 14/34 (41%), Positives = 24/34 (70%)

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCA 324
           ++E+ TP +    LW++SGHW  YRANM+ ++ +
Sbjct: 43  FQEVATPSLAQTGLWRRSGHWTHYRANMWTIEAS 76


>gi|12224878|emb|CAC21664.1| hypothetical protein [Homo sapiens]
          Length = 235

 Score =  150 bits (378), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 80/199 (40%), Positives = 112/199 (56%), Gaps = 7/199 (3%)

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           + LSTRP   +G   LWD AE ++K  L          +N+G    +GAFYGPK +  L 
Sbjct: 9   LALSTRPSGFLGDPCLWDQAEQVLKQALKEFGEPWD--LNSG----DGAFYGPKIDVHLH 62

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           DA+GR  QCGTIQ+DF LP RF+  Y         PV+IHRAV GS+ER +G++ E+  G
Sbjct: 63  DALGRPHQCGTIQLDFQLPLRFDLQYKGQAGALERPVLIHRAVLGSVERLLGVLAESCGG 122

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKI 603
             PLWLSP Q +V  + S   EYA+E    L++  L  + D  +  T++ +IR   +   
Sbjct: 123 KWPLWLSPFQVVVIPVGSEQEEYAKEAQQSLRAAGLVSDLDADSGLTLSRRIRRAQLAHY 182

Query: 604 PIIIICGDKEASERSIGIR 622
               + G KE S+R++ IR
Sbjct: 183 NFQFVVGQKEQSKRTVNIR 201


>gi|321468238|gb|EFX79224.1| hypothetical protein DAPPUDRAFT_245240 [Daphnia pulex]
          Length = 192

 Score =  149 bits (376), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 81/195 (41%), Positives = 114/195 (58%), Gaps = 10/195 (5%)

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
           L GL RVR F QDDAH+FC   Q+ +E   I+  +  +   FGF    ++LSTRPEK +G
Sbjct: 7   LSGLTRVRRFQQDDAHIFCIMGQIKSE---INGALAFLRDIFGF-TFQLRLSTRPEKFLG 62

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
               W+ AE  +   L+   ++ Q  +N G    +GAFYGPK +  + DA+ R  QC TI
Sbjct: 63  EIETWNHAEKELTESLNEFGDTWQ--LNPG----DGAFYGPKIDITIMDALRRPHQCATI 116

Query: 497 QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI 556
           Q++F LP RFN  ++N   EK  PV+IHRA+ GS++  I I+ E + G  P WLSP Q +
Sbjct: 117 QLEFQLPIRFNLSFINEAGEKEKPVIIHRAILGSVQHMIAILTEIYAGKWPFWLSPRQCV 176

Query: 557 VTTITSSAVEYAQEI 571
           V  +      YAQ++
Sbjct: 177 VVLVGPVFHGYAQQV 191


>gi|254692873|ref|NP_001157091.1| threonyl-tRNA synthetase, mitochondrial isoform 4 [Mus musculus]
 gi|74218920|dbj|BAE37840.1| unnamed protein product [Mus musculus]
          Length = 423

 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 93/284 (32%), Positives = 149/284 (52%), Gaps = 8/284 (2%)

Query: 5   IKLTFPDGS-IKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           IK++ P+G  +     + T   +A  IS +LA  AVA  +NG++ DL  P+  +  +  +
Sbjct: 66  IKISLPEGQKVDAVAWNTTPYQLAHQISVTLADTAVAAEVNGELYDLDRPLETDCHLRFL 125

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF--DKEQPFSSDELA 120
           T + P   AV  HS AH++  A +     V +  GP  E GFY+DF   KE+   S EL 
Sbjct: 126 TFDSPEGKAVFWHSSAHVLGAAAEQQLGAV-LCRGPSTESGFYHDFFLGKERTVRSAELP 184

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            +E+  QE+IA   PF +   S ++ R+LF  K   +K+ ++E        T+Y  G   
Sbjct: 185 ILERICQELIAAAQPFRRLEASRDQLRQLF--KDNHFKLHLIEEKVTGPTATVYGCGMSV 242

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+R TGQ+    KL+  + A WR       L R+ G ++   + L  +    E 
Sbjct: 243 DLCRGPHLRHTGQIGAL-KLLTNSSALWRSLGAPETLQRVSGISFPKVELLRNWEARREA 301

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR 284
           +E RDHR++ +E +LF   E   G  F+  +G +++  L++++R
Sbjct: 302 AELRDHRRIGKEQELFFFHELSPGSCFFLPRGTRVYNALVAFIR 345



 Score = 43.1 bits (100), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 10/86 (11%)

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
            F   E     CL   + +  +Y   GF    + LSTRP   +G   LWD AE +++  L
Sbjct: 342 AFIRLEAEIQGCL---DFLRCVYSVLGF-SFHLALSTRPPGFLGEPRLWDQAEQVLQQAL 397

Query: 453 DTIKNSSQDRINTGVLLGEGAFYGPK 478
           +  K      +N     G+GAFYGPK
Sbjct: 398 E--KFGEPWDLNP----GDGAFYGPK 417


>gi|218200879|gb|EEC83306.1| hypothetical protein OsI_28675 [Oryza sativa Indica Group]
          Length = 306

 Score =  148 bits (374), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 85/232 (36%), Positives = 125/232 (53%), Gaps = 8/232 (3%)

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           I + F    ++V L  RPEK +G    W+ AE  +   L+      Q  IN G    +GA
Sbjct: 77  ILESFTGMSLVVHLQ-RPEKYLGDIETWNKAEQQLTEALNEFGKPWQ--INEG----DGA 129

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC-HPVMIHRAVFGSIE 532
           FYGPK +  + DA+ R +QC T+Q+DF LP RF   Y      K   PVMIHRA+ GS+E
Sbjct: 130 FYGPKIDIGVFDALKRKFQCATLQLDFQLPLRFKLTYSAEDEAKLERPVMIHRAILGSVE 189

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
           R   I++E++ G  PLWLSP QAIV +I+S++VEYA+++   +      +  D  + TI 
Sbjct: 190 RMFAILLEHYNGKWPLWLSPRQAIVCSISSNSVEYAKQVRARIHEAGFHVAIDETDRTIQ 249

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            K+RE  + +   I++ G +EA    + +R         VS+ D I    +E
Sbjct: 250 KKVREAQLAQFNYILVVGAQEAETGQVSVRVRDKAELATVSIDDIITRFKEE 301


>gi|145532883|ref|XP_001452194.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124419877|emb|CAK84797.1| unnamed protein product [Paramecium tetraurelia]
          Length = 299

 Score =  146 bits (368), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 78/160 (48%), Positives = 100/160 (62%), Gaps = 7/160 (4%)

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYR+LPVR A+FG ++RNE  G+L GL RVR F QDDAH+FC  +Q+  E     + +  
Sbjct: 5   SYRDLPVRFADFGVLHRNEVHGALSGLTRVRRFQQDDAHIFCRMDQIQEEIKSCLDFLSY 64

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           IY  FGFE   + LSTRPEK +G+  +WD+AE  ++  L       +      V  G+GA
Sbjct: 65  IYSLFGFE-FKLYLSTRPEKFLGTKEVWDNAEYQLEQGLKKFGKPFE------VNPGDGA 117

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS 513
           FYGPK +  L DA  R+ QCGTIQ+DFNLP RFN  Y  S
Sbjct: 118 FYGPKIDVKLYDAYKREHQCGTIQLDFNLPERFNLQYRAS 157


>gi|153217652|ref|ZP_01951333.1| threonyl-tRNA synthetase [Vibrio cholerae 1587]
 gi|124113402|gb|EAY32222.1| threonyl-tRNA synthetase [Vibrio cholerae 1587]
          Length = 159

 Score =  144 bits (364), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 66/149 (44%), Positives = 93/149 (62%)

Query: 496 IQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQA 555
           +Q+DFNLP+R  A YV   +E+  PVMIHRA+ GS+ERFIGI+IE + G  P WL+P QA
Sbjct: 1   MQLDFNLPTRLGATYVGESNERLIPVMIHRAILGSLERFIGILIEEYAGFFPTWLAPEQA 60

Query: 556 IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEAS 615
           +V  IT    +YA E+A  L+   +  + D RNE I +KIREH++K++P +++CGD+E  
Sbjct: 61  VVVNITDKQADYAHEVAQKLQKCGIRAKADLRNEKIGFKIREHTLKRVPYMLVCGDQEME 120

Query: 616 ERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
              I +R        K  L D I  +  E
Sbjct: 121 ADEIAVRTRKGKDLGKFKLDDFIAHIQAE 149


>gi|255019144|ref|ZP_05291270.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL F2-515]
          Length = 182

 Score =  144 bits (364), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 73/182 (40%), Positives = 114/182 (62%), Gaps = 7/182 (3%)

Query: 239 EESEKRDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINT 296
           +E+++RDHRKL +E++LF +  E G G+  W  KG  I + +  Y+  ++ +  Y  + T
Sbjct: 1   KEAKERDHRKLGKELELFTNSIEVGQGLPLWLPKGATIRRVIERYIVDKEERLGYNHVYT 60

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P + +  L++ SGHWD Y  +MF     D+         L+PMNCP H+ ++ + + SYR
Sbjct: 61  PIMANVELYKTSGHWDHYHEDMFPTMKMDN-----EELVLRPMNCPHHMMIYKNDIHSYR 115

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ELP+R+AE G ++R E SG+L GL RVRG T +DAHVF   +Q+ +E  ++  LI+ +YK
Sbjct: 116 ELPIRIAELGMMHRYEMSGALSGLQRVRGMTLNDAHVFVRPDQIKDEFKRVVELILEVYK 175

Query: 417 DF 418
           DF
Sbjct: 176 DF 177


>gi|282890618|ref|ZP_06299141.1| hypothetical protein pah_c022o225 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281499615|gb|EFB41911.1| hypothetical protein pah_c022o225 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 556

 Score =  144 bits (363), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 135/566 (23%), Positives = 247/566 (43%), Gaps = 26/566 (4%)

Query: 85  VQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHE 144
           ++ ++P VQ+    I + GFYYD    QP +   L  IE+++ ++        + ++  E
Sbjct: 2   LRDLFPNVQLVQSGINQVGFYYDCLFPQPVTETLLPLIEERLWQLCKNPPAIQEMHMMRE 61

Query: 145 KARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKV 203
            A   F+   +++  ++ E+  A+EN V L R  +++DL     +     ++    L   
Sbjct: 62  NAVHFFQHHGQSFHAQLAEN--AEENIVELIRMADFYDLYAETEIPDPTVIRAVKILSFS 119

Query: 204 AGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGS 263
               +     +  + R++G A+  + E+  +L      +K  H  L +EM+LF  A   S
Sbjct: 120 EKEIYNASFGKLRVIRLFGAAFLQRDEMKVFLKKWTRHKKNQHVHLGQEMELFLPAGISS 179

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD-QHLWQQSGHWDSYRANMFAV 321
            V  W  +G  +   ++ +       + Y++I    +L  +H   +       R   + V
Sbjct: 180 WV--WLPRGESLRAAVLKWCENGYAANGYQKIGMTGLLPLEHFSFKPSVEKKIREQSWIV 237

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           +      K+   + L P             L S+   P+R  E    +    S  L GL+
Sbjct: 238 E------KEEEEYVL-PSTQLSSAFFAASALCSF---PLRFFESEKRFSPAASDQLDGLL 287

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALW 441
           + +     +A++FC  EQ+ +E +     I    K FGFE     L  + EK   +   W
Sbjct: 288 KSQTCEMSNAYLFCLTEQVLHELISSLQFIEETVKVFGFEA-QWYLYPKAEKNAAAKKQW 346

Query: 442 DDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFN 501
             A   +   L          +N  V     ++ GP+ E  L D++ R W+   ++ D  
Sbjct: 347 PQAIAFLHEALKFC------HLNYQVEEAFSSWRGPRIEVKLFDSLNRQWKGPQLEFDLF 400

Query: 502 LPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT 561
               F A    +   +  P +I     GS ER+I ++IE  +G LP WL+P Q  +  I 
Sbjct: 401 SAESF-ALASQAKGLQSTPWVIRWTALGSTERWIALLIEQNEGRLPFWLAPEQVRIFPIG 459

Query: 562 SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
              +EYA++I  L+ + +L +  D R   +  KI + + +++P ++I GDKE  E  + +
Sbjct: 460 EKVIEYAKKIQVLMLNQNLRVAIDKRQHPLAEKIYDATRQRVPYLVIVGDKEERENRLTV 519

Query: 622 RRFGSTTTQK-VSLLDAIPILTKESL 646
           R F   T +  V + D + +L+KE+L
Sbjct: 520 RSFDDKTAKTDVEIKDFLALLSKENL 545


>gi|221118771|ref|XP_002157095.1| PREDICTED: similar to predicted protein, partial [Hydra
           magnipapillata]
          Length = 204

 Score =  144 bits (362), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 67/154 (43%), Positives = 98/154 (63%), Gaps = 2/154 (1%)

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE-KCHPVMIHRAVF 528
           G+GAFYGPK +  ++DA+ R  QC TIQ+DF LP RFN  YV+   + +  PV+IHRA+ 
Sbjct: 18  GDGAFYGPKIDIQIRDALRRYHQCATIQLDFQLPERFNLTYVSGEGDDQKRPVIIHRAIL 77

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRN 588
           GS+ER I I+ EN+ G  P WLSPIQA+V  +++   EYAQ++   L+   + +  D   
Sbjct: 78  GSVERMIAILTENYGGKWPFWLSPIQAVVIPVSNKFDEYAQKVHRFLQDFRVDVNLD-AG 136

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           ET+N KIR   +     I++ GDKE +  ++ +R
Sbjct: 137 ETLNKKIRNAQLMHYNFILVVGDKEMTSNTVNVR 170


>gi|221502959|gb|EEE28669.1| threonyl-tRNA synthetase, putative [Toxoplasma gondii VEG]
          Length = 377

 Score =  143 bits (361), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 96/295 (32%), Positives = 143/295 (48%), Gaps = 77/295 (26%)

Query: 334 FALKPMNCPGHVA-VFNHGLKSY-----------------------------------RE 357
            +LKPM+CP H++ VF + L +                                    R 
Sbjct: 72  LSLKPMSCPLHLSYVFPYLLVTSSSPRHDVSLSTSPSPVTSKEEGALERETRAKAEVSRH 131

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY-K 416
           LP+R++EFG V+R E   +L GL R+R FTQDD H+ CT+EQ   E       I+ +Y +
Sbjct: 132 LPLRISEFGRVFRRERRSALCGLFRLREFTQDDGHILCTREQAVEEIKVQLASILHLYVQ 191

Query: 417 DFGF--EKIMVKLSTRPEKRV-GSDA--------LWDDAEN-IMKGVLDTIKNSSQDRIN 464
            FG   E + V L +RP K    SDA        LW  AE  +++   + + N+S     
Sbjct: 192 VFGISPEGVKVSLGSRPAKASRRSDASADSEDEKLWTQAEAWLLEAAREVLPNASSVETE 251

Query: 465 TGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIH 524
                G GAFYGPK ++ L D  GR WQ GT+Q                       V+IH
Sbjct: 252 E----GGGAFYGPKLDFSLSDVQGRWWQTGTLQ---------------------PLVLIH 286

Query: 525 RAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA---VEYAQEIANLLK 576
           RA  GS+ERF+ +++E   G+LP+WL+P++A+V  ++  +    EYA+ +A +L+
Sbjct: 287 RAAVGSLERFLALLLELRNGDLPVWLAPVKAVVCPVSVQSREIREYAERVATVLR 341


>gi|270610574|ref|ZP_06221671.1| threonine--tRNA ligase [Haemophilus influenzae HK1212]
 gi|270318077|gb|EFA29334.1| threonine--tRNA ligase [Haemophilus influenzae HK1212]
          Length = 151

 Score =  142 bits (357), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 59/124 (47%), Positives = 85/124 (68%)

Query: 499 DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVT 558
           DF LP R +A YV   + +  PVMIHRA+ GSIERFIGI+ E + G  P WL+P QA+V 
Sbjct: 1   DFALPGRLDATYVAEDNSRKTPVMIHRAILGSIERFIGIITEEYAGFFPAWLAPTQAVVM 60

Query: 559 TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERS 618
            IT S  +Y Q++A  L    L ++TD RNE + +KIREH+++++P +++CGDKE +E  
Sbjct: 61  NITDSQADYVQKVAKQLSDVGLRVKTDLRNEKVGFKIREHTLRRVPYMLVCGDKEIAEGK 120

Query: 619 IGIR 622
           + +R
Sbjct: 121 VAVR 124


>gi|4972787|gb|AAD34790.1|AF136400_4 threonyl-tRNA synthetase [Pseudomonas fluorescens]
          Length = 161

 Score =  141 bits (355), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 57/129 (44%), Positives = 88/129 (68%)

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI 553
           GT+Q+DFNLP R  A YV+  + + HPVM+HRA+ GS ERF+GI+IE+++G  P WL+P 
Sbjct: 1   GTLQLDFNLPIRLGAEYVSEDNSRKHPVMLHRAILGSFERFVGILIEHYEGAFPAWLAPT 60

Query: 554 QAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
           QA+V  IT    ++A E+   L       ++D RNE I +KIREH++ K+P +++ GD+E
Sbjct: 61  QAVVMNITDKQADFALEVEKTLNQSGFRAKSDLRNEKIGFKIREHTLLKVPYLLVIGDRE 120

Query: 614 ASERSIGIR 622
              +++ +R
Sbjct: 121 VEMQTVAVR 129


>gi|329943295|ref|ZP_08292069.1| threonyl and Alanyl tRNA synthetase second additional domain
           protein [Chlamydophila psittaci Cal10]
 gi|328814842|gb|EGF84832.1| threonyl and Alanyl tRNA synthetase second additional domain
           protein [Chlamydophila psittaci Cal10]
          Length = 236

 Score =  140 bits (352), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 76/204 (37%), Positives = 113/204 (55%), Gaps = 6/204 (2%)

Query: 17  FPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIRH 75
            P   T +D A  I  S       V IN ++ DLS  + EG ++  +T  DP    +  H
Sbjct: 13  LPEGTTAADFASKIKNS--HYFAGVVINDQIKDLSTTLNEGDTLRFVTFTDPEGREIFLH 70

Query: 76  SCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSP 135
           + AHI+A+A+  +WP+    IGP+I+ GFYYDF      S D+   IE  M +I      
Sbjct: 71  TSAHILAQAILRLWPDAIPTIGPVIDQGFYYDF-ANLSISEDDFLMIENMMGQISEAKFA 129

Query: 136 FLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVK 195
             K+  ++ K   L E     +KVE+++ +P  E++T Y QGE+ DLCRGPH+ ST  VK
Sbjct: 130 VQKKTFNN-KQEALNEFANNPFKVELIQELPEGESITAYSQGEFMDLCRGPHLPSTAPVK 188

Query: 196 KFFKLMKVAGAYWRGDSNRPMLSR 219
             FKL++ + AYWRG S++ + S+
Sbjct: 189 A-FKLLRTSAAYWRGGSSKRIFSK 211


>gi|294463365|gb|ADE77216.1| unknown [Picea sitchensis]
          Length = 215

 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 74/217 (34%), Positives = 119/217 (54%), Gaps = 8/217 (3%)

Query: 431 PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRD 490
           PEK +G    W  AE  +   L+      Q  IN G    +GAFYGPK +  + DA+ R 
Sbjct: 2   PEKHLGDLETWQRAEAALTEALNAFGKPWQ--INEG----DGAFYGPKIDITVFDALKRK 55

Query: 491 WQCGTIQVDFNLPSRFNAFY-VNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW 549
           +QC TIQ+DF LP RF+  Y     +++  PVMIHRA+ GS+ER + I++E++ G  P W
Sbjct: 56  FQCATIQLDFQLPIRFDLSYSTEDEAKRERPVMIHRAILGSVERMLAILLEHYAGKWPFW 115

Query: 550 LSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIIC 609
           LSP QAIV  ++  + +YA  + + +      ++ D  +  I  KIRE  + +   I++ 
Sbjct: 116 LSPRQAIVCPVSEKSSDYALRVRDQIHQAGYYVDVDTSDRKIQKKIREAQLAQYNYILVV 175

Query: 610 GDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           G++EA+   + + R    +  +V  +D +  L +E +
Sbjct: 176 GEEEANTGQVSV-RIRDKSAHEVRSMDELLKLFREEI 211


>gi|255031032|ref|ZP_05302983.1| threonyl-tRNA synthetase [Listeria monocytogenes LO28]
          Length = 160

 Score =  138 bits (347), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 72/161 (44%), Positives = 110/161 (68%), Gaps = 3/161 (1%)

Query: 139 QYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFF 198
           + +S E+A + F++  + YK+E++E+IP  E VT+Y QGE+FDLCRG HV STG+++  F
Sbjct: 1   EVVSREEAIKRFKAIGDQYKLELIEAIPEDETVTIYTQGEFFDLCRGVHVPSTGKIQ-VF 59

Query: 199 KLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLF-H 257
           KL+ VAGAYWRGDSN  ML RIYGTA+  +  L +++   +E+++RDHRKL +E++LF +
Sbjct: 60  KLLSVAGAYWRGDSNNKMLQRIYGTAFFDKNGLKEFIQMQKEAKERDHRKLGKELELFTN 119

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTP 297
             E G G+  W  KG  I + +  Y+  ++ +  Y  + TP
Sbjct: 120 SIEVGQGLPLWLPKGATIRRVIERYIVDKEERLGYNHVYTP 160


>gi|226330399|ref|ZP_03805917.1| hypothetical protein PROPEN_04317 [Proteus penneri ATCC 35198]
 gi|225201194|gb|EEG83548.1| hypothetical protein PROPEN_04317 [Proteus penneri ATCC 35198]
          Length = 87

 Score =  137 bits (345), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 59/87 (67%), Positives = 72/87 (82%), Gaps = 6/87 (6%)

Query: 339 MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE 398
           MNCPGHV +F  GL+SYR+LP+R+AEFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT+E
Sbjct: 1   MNCPGHVQIFKQGLRSYRDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEE 60

Query: 399 QMF---NECLKIHNLIISIYKDFGFEK 422
           Q+    N+C+K   LI  +Y  FGFEK
Sbjct: 61  QILSEVNDCIK---LIYDVYSTFGFEK 84


>gi|288932143|ref|YP_003436203.1| threonyl-tRNA synthetase [Ferroglobus placidus DSM 10642]
 gi|288894391|gb|ADC65928.1| threonyl-tRNA synthetase [Ferroglobus placidus DSM 10642]
          Length = 618

 Score =  137 bits (344), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 116/460 (25%), Positives = 215/460 (46%), Gaps = 38/460 (8%)

Query: 193 QVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD------- 245
           +V K  K  + A +YW   +    L  +    +   ++L +++ +  E EKR        
Sbjct: 138 EVTKALKDEEKAVSYWYILTEDKKLVEVDKFDFTNYEKLRKFVKY--EMEKRRAVDKIPP 195

Query: 246 HRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           H +L R ++L    E   SG + ++ KG  +   + S++  K  D    E+ TP + D+ 
Sbjct: 196 HVELMRRLELADYEEASDSGHLKYYPKGRLVKSLIESFVTEKCVDFGAMEVETPIMYDRA 255

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
                 + + + A  + +K       D R F L+   C G   +  +G+  YR LP+R+ 
Sbjct: 256 HPTLRKYLERFPARQYIIKG------DKRDFFLRFAACFGQFLIAANGVIPYRSLPLRMY 309

Query: 364 EFGSV-YRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFE 421
           E     +R E  G L GL R+R FT  D H      E+   E  + + L + + K+ G  
Sbjct: 310 ELTRYSFRKEQRGELVGLRRLRAFTMPDMHTIVKDMEEAKREFFEQYKLSVEVLKELGIY 369

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
               +++ R    V  D  +++ ++ +  ++D +K      I   +      ++  KFE+
Sbjct: 370 PEDYEVAIR----VTKD-FFEENKDFIYSLVDVLKKP----ILIEMWDRRFFYFVLKFEF 420

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
              DA+ +     T+Q+D     R+  +Y +   EK  P+++H +  G++ER +  ++E 
Sbjct: 421 NFVDALDKASALSTVQIDVENAERYGIYYYDEKGEKRTPLILHCSASGAVERVMYALLEK 480

Query: 542 F-----KGNLPL---WLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
                 KG LP+   WLSP Q  V  ++   ++ A E+A +LK + + ++ D R ET++ 
Sbjct: 481 AHMEMEKGKLPMLPVWLSPTQVRVIPVSERHMDRALEVAEVLKKNKIRVDVDDREETVSK 540

Query: 594 KIREHSIKKIPIIIICGDK--EASERSIGIRRFGSTTTQK 631
           KIR+ + + IP I + GDK  E+ + ++ +R   +   QK
Sbjct: 541 KIRDAATEWIPYIAVIGDKELESGKLTVTVRSESTLKEQK 580


>gi|20093982|ref|NP_613829.1| threonyl-tRNA synthetase [Methanopyrus kandleri AV19]
 gi|22654113|sp|Q8TXW5|SYT_METKA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|19886944|gb|AAM01759.1| Threonyl-tRNA synthetase [Methanopyrus kandleri AV19]
          Length = 624

 Score =  136 bits (342), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 101/392 (25%), Positives = 178/392 (45%), Gaps = 24/392 (6%)

Query: 242 EKRDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQV 299
           E+  H KL RE ++  H      G + W+ KG  + + L  Y+   + D     + TP +
Sbjct: 194 EEPAHVKLMREKEICDHEPAADVGHVRWYPKGHVVRRCLAEYVENLMADLGAAVVETPVM 253

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            D        H D +    + ++  +      R   L+   C G   +      S R LP
Sbjct: 254 YDLSEDAIREHADKFGERQYRIRAGN------RALMLRYAACFGAFRLLADTTLSRRHLP 307

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDF 418
           +++ E    +R E SG + GL R+R FT  D H  C   ++   E L+   L + +  D 
Sbjct: 308 LKIYELSQSFRLEQSGEVVGLKRLRAFTMPDLHTVCADMDEAVEEFLEQAKLCLEVGLDL 367

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           G E  +V  +T    +   + L + AE + K   D         +   VL     ++  K
Sbjct: 368 GLEYEVVFRTTEKFLKERKEVLEELAEAMEKAYGDA------KPVLVEVLPERKHYWECK 421

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++   D++GR  +  T+Q+D     RF   Y +   ++ HPV++H +  GS+ER I  +
Sbjct: 422 VDFAFIDSLGRPIENPTVQIDVESGRRFGITYADESGDERHPVILHCSPTGSLERVICAI 481

Query: 539 IE-NFK--------GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE 589
           +E  +K          LP WLSP+QA V  ++   +E A+++   LKS    ++ D R+E
Sbjct: 482 LEGQYKRFEQEGKLPTLPTWLSPVQARVIPVSEKVLEEAEKVFEELKSEGFRVDLDDRDE 541

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGI 621
            +  KIR+   + +P +I+ G++E  + ++ +
Sbjct: 542 PVGRKIRDAGEEWVPYVIVIGEEEVKKGTLSV 573


>gi|328725988|ref|XP_003248697.1| PREDICTED: probable threonyl-tRNA synthetase 2, cytoplasmic-like
           [Acyrthosiphon pisum]
          Length = 180

 Score =  135 bits (339), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 73/181 (40%), Positives = 106/181 (58%), Gaps = 7/181 (3%)

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +A+F  + RNE  G+L GL  V+ F  DDAH+FCT E++  E +   + +  +Y  F F 
Sbjct: 5   MADFRVIQRNELLGALTGLTHVQRFQLDDAHIFCTTEEIGQEMMSSLDFLRHVYTVFRF- 63

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
               +LS RPEK +G   +  +AE   K + D++    +      V   +GAFYGPK + 
Sbjct: 64  TFQFRLSARPEKYLGELEMLKNAE---KQLADSLNLFCKPWTLNPV---DGAFYGPKIDI 117

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            + DA+ R  QC TIQ+DF LP RFN  +++   EK   V+IHRA+FGS+ER I I+ E+
Sbjct: 118 TISDALKRQHQCATIQLDFQLPIRFNLNFISESGEKKRSVIIHRAIFGSVERMIAILTES 177

Query: 542 F 542
           F
Sbjct: 178 F 178


>gi|58700029|ref|ZP_00374583.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|58533457|gb|EAL57902.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
          Length = 121

 Score =  135 bits (339), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 60/114 (52%), Positives = 84/114 (73%), Gaps = 3/114 (2%)

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           + +FN   +SYR+LP+R+AEFG+ +RNE SGSLHGLMRVRGFTQDDAH+FC +EQ+ +E 
Sbjct: 1   MQIFNSHTRSYRDLPIRMAEFGTCHRNESSGSLHGLMRVRGFTQDDAHIFCMEEQVNSET 60

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNS 458
           +K  +L+  +Y + GF +I VK S RP+ R G D +WD AE   K +L+ +K +
Sbjct: 61  IKFCDLLKEVYSELGFNEISVKFSDRPDVRAGDDEVWDRAE---KALLEAVKEA 111


>gi|156333655|ref|XP_001619379.1| hypothetical protein NEMVEDRAFT_v1g151543 [Nematostella vectensis]
 gi|156202462|gb|EDO27279.1| predicted protein [Nematostella vectensis]
          Length = 175

 Score =  134 bits (338), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 74/174 (42%), Positives = 100/174 (57%), Gaps = 8/174 (4%)

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E +   + +  +Y  FGF    + LSTRPEK +G   LW+ AE  ++  L+        
Sbjct: 6   QEIISCLDFLKHVYGVFGF-TFKLNLSTRPEKYLGKIELWNQAEKELEAALNGFGQPWV- 63

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHP 520
            +N G    +GAFYGPK +  ++DA+ R  QC TIQ+DF LP RFN  YV     E+  P
Sbjct: 64  -LNPG----DGAFYGPKIDIQIQDALRRYHQCATIQLDFQLPERFNLTYVTGEGDERKRP 118

Query: 521 VMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANL 574
           V++HRA+ GS+ER I I+ E+F G  P WLSP QAIV  I     EYAQ++  L
Sbjct: 119 VIVHRAILGSVERMIAILTESFGGKWPFWLSPRQAIVIPIGPKYDEYAQKVCCL 172


>gi|121730168|ref|ZP_01682562.1| threonyl-tRNA synthetase [Vibrio cholerae V52]
 gi|121628087|gb|EAX60627.1| threonyl-tRNA synthetase [Vibrio cholerae V52]
          Length = 153

 Score =  134 bits (337), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 62/143 (43%), Positives = 87/143 (60%)

Query: 502 LPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT 561
           LP+R  A YV   +E+  PVMIHRA+ GS+ERFIGI+IE + G  P WL+P QA+V  IT
Sbjct: 1   LPTRLGATYVGESNERLIPVMIHRAILGSLERFIGILIEEYAGFFPTWLAPEQAVVVNIT 60

Query: 562 SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
               +YA E+A  L+   +  + D RNE I +KIREH++K++P +++CGD+E     I +
Sbjct: 61  DKQADYAHEVAQKLQKCGIRAKADLRNEKIGFKIREHTLKRVPYMLVCGDQEMEAGEIAV 120

Query: 622 RRFGSTTTQKVSLLDAIPILTKE 644
           R        K  L D I  +  E
Sbjct: 121 RTRKGKDLGKFKLDDFIAHIQAE 143


>gi|153870647|ref|ZP_02000003.1| threonyl-tRNA synthetase [Beggiatoa sp. PS]
 gi|152072887|gb|EDN69997.1| threonyl-tRNA synthetase [Beggiatoa sp. PS]
          Length = 191

 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 65/157 (41%), Positives = 101/157 (64%), Gaps = 1/157 (0%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPE 65
           +T PDGS + F    T +DVA SI   LAK A+A  IN ++ D S  + +   + IIT  
Sbjct: 4   ITLPDGSQRQFENPITVADVATSIGPGLAKAAIAGKINDRLVDTSTMIEDDVQLAIITDR 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           DP  L +IRHSCAH+MA+AV+S++P  QV IGP++E GFYYDF  E+ FS ++L +I+ K
Sbjct: 64  DPDGLEIIRHSCAHLMAQAVKSLFPTAQVTIGPVVEHGFYYDFAYEKSFSPEDLEKIQAK 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL 162
           M+E++A++    +  +S  +A + F    +  ++++L
Sbjct: 124 MEELVAQNFTVTRSVMSRHEAIQFFRGLAKNIRLKLL 160


>gi|327401820|ref|YP_004342659.1| threonyl-tRNA synthetase [Archaeoglobus veneficus SNP6]
 gi|327317328|gb|AEA47944.1| threonyl-tRNA synthetase [Archaeoglobus veneficus SNP6]
          Length = 615

 Score =  131 bits (330), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 107/382 (28%), Positives = 183/382 (47%), Gaps = 33/382 (8%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG + ++ KG  I   L +++ +K I+    E+ TP +  +       + + + A  + +
Sbjct: 213 SGHMRYYPKGRLIKSLLETFVTQKCIEYGAMEVETPIMYSREHPTLRRYLERFPARQYII 272

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV-YRNEPSGSLHGL 380
           K       D R F L+   C G   + +    +Y+ LP+R+ E     +R E  G L GL
Sbjct: 273 KG------DKREFFLRFAACFGQFLMCSDATITYKNLPLRMYELTRYSFRKEQRGELVGL 326

Query: 381 MRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDA 439
            R+R FT  D H      EQ   E    + L +   K+ G E    +++ R    V  D 
Sbjct: 327 RRLRAFTMPDMHTLTKDMEQAKQEFFNQYKLSVETLKEIGLEPEDYEVAIR----VTKD- 381

Query: 440 LWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVD 499
            +++ +  +  ++D +K      I   +      ++  KFE+   DA+ +     T+Q+D
Sbjct: 382 FYNENKEFVHSLVDVLKKP----ILVEMWDQRFFYFVLKFEFNFVDALEKASALSTVQID 437

Query: 500 FNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF-----KGNLPL---WLS 551
                R++  YVN   EK HP ++H +  G+IER I  ++E       KG LP+   WLS
Sbjct: 438 VENAERYDITYVNEKGEKEHPFILHCSASGAIERCIYALLEKAYMEKEKGKLPMLPVWLS 497

Query: 552 PIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
           P Q  +  ++   V+YA E+A   K + + ++ D R+ET+  KIR+ S++ IP I + G+
Sbjct: 498 PTQVRIIPVSEKYVDYAIEVAK--KMNGVRVDVDDRDETLGKKIRDASMEWIPYIAVVGE 555

Query: 612 KEASE--RSIGIRRFGSTTTQK 631
            E +E   ++ IR   S +TQK
Sbjct: 556 NEVNEGYLTVTIR---SESTQK 574


>gi|213580235|ref|ZP_03362061.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
          Length = 168

 Score =  130 bits (327), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 59/158 (37%), Positives = 103/158 (65%), Gaps = 1/158 (0%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D SD +  + ++ IIT +
Sbjct: 4   ITLPDGSQRHYDHPVSPMDVALDIGPGLAKATIAGRVNGELVDASDLIENDATLSIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ +WP  ++AIGP++++GFYYD D ++  + +++  +EK+
Sbjct: 64  DEEGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVVDNGFYYDVDLDRTLTQEDVEALEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE 163
           M E+  ++   +K+ +S  +ARE F  + E+YKV IL+
Sbjct: 124 MHELAEKNYDVIKKKVSWHEARETFVKRGESYKVSILD 161


>gi|145590982|ref|YP_001152984.1| threonyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
 gi|166225486|sp|A4WIW5|SYT_PYRAR RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|145282750|gb|ABP50332.1| aminoacyl-transfer RNA synthetase, class II [Pyrobaculum
           arsenaticum DSM 13514]
          Length = 608

 Score =  130 bits (326), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 89/330 (26%), Positives = 149/330 (45%), Gaps = 36/330 (10%)

Query: 310 HWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVY 369
           H   +   ++ V+   D I       L+   C    A+    + SYR LP  L E    Y
Sbjct: 263 HARLFGERLYVVESDTDLI-------LRYAACFQQFAMVKDWVISYRHLPFGLLEIADSY 315

Query: 370 RNEPSGSLHGLMRVRGFTQDDAHVFCT--KEQMFNECLKIHNLIISIYKDFGFEKIMVKL 427
           R+E  G    L R+R F   D H+F    KE M     K+H +I       G   +    
Sbjct: 316 RHEQPGETVLLFRLRRFYMPDLHIFTKDLKEAM-EVTFKLHEVIFREIGKLGRTYV---- 370

Query: 428 STRPEKRVGSDALWDDAENIMKG---VLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
                      +L++  E+  KG    L  +       I   +L G+  ++    E+ + 
Sbjct: 371 -----------SLYNVTEDFYKGHREYLVELARREGKPILVRILPGQKYYWVLNVEFHIV 419

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D +GR  +  T Q+D     RF   YV+ +++  +PV+IH A+ GS+ER++  + +    
Sbjct: 420 DELGRPREIATFQIDVGNAQRFGIKYVDENNQVRYPVIIHTAILGSVERYLYAVFDTMAK 479

Query: 545 --------NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                    LP WLSP+Q  V  ++   ++YA  +A+LL++  + ++ D R ET++ KIR
Sbjct: 480 MEKEGKTPRLPTWLSPVQTRVIPVSKENLKYAMAVADLLEAEGIRVDVDDREETLSKKIR 539

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGS 626
           +     +P II+ G KE +E ++ +R  G 
Sbjct: 540 DAETAWVPYIIVVGSKEEAEGTVTVRERGG 569


>gi|44662849|gb|AAS47506.1| threonyl tRNA synthetase [Meiothermus silvanus DSM 9946]
          Length = 149

 Score =  129 bits (325), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 63/150 (42%), Positives = 95/150 (63%), Gaps = 12/150 (8%)

Query: 72  VIRHSCAHIMAEAVQSIW------PE-VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           + RH+ AH+MA+AV+  +      P+ V++AIGP+IE+GFYYD D  +P    +L +IE 
Sbjct: 1   IFRHTLAHVMAQAVREFFAAKGFDPDAVKLAIGPVIENGFYYDIDPPEPLGEGDLPEIEA 60

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE----WF 180
           +M +I+  +    +  L  E+A   FE  K+ YK E+++ +P    ++ Y QGE    + 
Sbjct: 61  RMHQIVKENLELRRFVLPREEALRRFEG-KDPYKTELIQDLPEGVEISFYAQGEGTHGFT 119

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRG 210
           DLCRGPHV STG++  +FKL  +AGAYWRG
Sbjct: 120 DLCRGPHVPSTGRIPPYFKLTHIAGAYWRG 149


>gi|11498158|ref|NP_069384.1| threonyl-tRNA synthetase [Archaeoglobus fulgidus DSM 4304]
 gi|3334363|sp|O29703|SYT_ARCFU RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|2650076|gb|AAB90685.1| threonyl-tRNA synthetase (thrS) [Archaeoglobus fulgidus DSM 4304]
          Length = 619

 Score =  129 bits (325), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 105/423 (24%), Positives = 196/423 (46%), Gaps = 37/423 (8%)

Query: 246 HRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           H +  R ++L  +  A D SG I ++ KG  +   L  ++ RK  D    E+ TP + D+
Sbjct: 197 HVEYMRRLELADYEPASD-SGHIRYYPKGRLVKTLLEQFITRKCIDYGAMEVETPIMYDR 255

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
           +      + + + A  + +K       D R F L+   C G   + +    +YR LP+++
Sbjct: 256 NHPTLRRYLERFPARQYIIKG------DKREFFLRFAACFGQFLMLSSSTITYRNLPLKI 309

Query: 363 AEFGSV-YRNEPSGSLHGLMRVRGFTQDDAHVFC-----TKEQMFNECLKIHNLIISIYK 416
            E     +R E  G L GL R+R FT  D H         KE+ FN+    + L + + +
Sbjct: 310 YELTRYSFRKEQRGELVGLRRLRAFTMPDMHTVAKDMEQAKEEFFNQ----YRLSVEVLR 365

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           + G E    +++ R  K       +++    +  ++D +K      I   +      ++ 
Sbjct: 366 EIGLEPEDYEVAVRITK-----DFYEENREFVHSLVDILKKP----ILIEMWDHRFFYFV 416

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
            KFE+   DA+ +     T+Q+D     R+   +V+S  ++ HP ++H +V G++ER + 
Sbjct: 417 LKFEFNFVDALDKASALSTVQIDVENAERYGITFVDSDGKEKHPYILHCSVSGAVERVMY 476

Query: 537 IMIENFK-----GNLPL---WLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRN 588
            ++E  K     G LP+   WLSP Q  V  ++   V+ A +IA+ +  + + ++ D RN
Sbjct: 477 ALLEKAKFMLDEGRLPMLPVWLSPTQVRVIPVSERFVDAAIKIADDIARNGIRVDVDDRN 536

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
           ET+  KIR+   + IP I + G+KE     + +     +T ++   ++       E +  
Sbjct: 537 ETLGKKIRDAQTEWIPYIAVVGEKEIESGKLAVTVRAESTQKEQKRVEMSAEELAERVRS 596

Query: 649 DCQ 651
           +C+
Sbjct: 597 ECE 599


>gi|84393193|ref|ZP_00991956.1| threonyl-tRNA synthetase [Vibrio splendidus 12B01]
 gi|84376159|gb|EAP93044.1| threonyl-tRNA synthetase [Vibrio splendidus 12B01]
          Length = 147

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 61/137 (44%), Positives = 83/137 (60%)

Query: 508 AFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEY 567
           A YV   +E+  PVMIHRA+ GS+ERFIGI+IE + G  P WL+P QAIV  IT    EY
Sbjct: 1   ATYVGEDNERHTPVMIHRAILGSLERFIGILIEEYAGFFPTWLAPEQAIVMGITDKQSEY 60

Query: 568 AQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGST 627
            QEIA  L+     ++ D RNE I +KIREH++K++P +++CGD+E     I +R     
Sbjct: 61  VQEIAKKLQKSGFRVKADLRNEKIGFKIREHTLKRVPFMLVCGDQEMEAGEIAVRTRKGK 120

Query: 628 TTQKVSLLDAIPILTKE 644
              K  + D I  +  E
Sbjct: 121 DLGKFKVDDFISYIQAE 137


>gi|44662851|gb|AAS47507.1| threonyl tRNA synthetase [Meiothermus ruber DSM 1279]
          Length = 149

 Score =  129 bits (324), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 62/150 (41%), Positives = 98/150 (65%), Gaps = 12/150 (8%)

Query: 72  VIRHSCAHIMAEAVQSIWPE-------VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           + RH+ AH++A+AV+ ++ E       V++AIGP+IE+GFYYD D  +P   ++L  IE+
Sbjct: 1   IFRHTLAHVLAQAVRELYTERGYRPEEVKLAIGPVIENGFYYDMDVPEPIRGEDLPIIEE 60

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE----WF 180
           KM+ I+A + P  +  L  E+A + + +  + YK E+++ +P  E ++ Y QG+    + 
Sbjct: 61  KMRRIVAANLPLKRFVLPREEALKRY-AGIDPYKTELIQDLPESEELSFYAQGDDTYGFT 119

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRG 210
           DLCRGPHV STG++   FKL  +AGAYWRG
Sbjct: 120 DLCRGPHVPSTGRIPPHFKLTGIAGAYWRG 149


>gi|242398481|ref|YP_002993905.1| Threonyl-tRNA synthetase [Thermococcus sibiricus MM 739]
 gi|259516775|sp|C6A1R1|SYT_THESM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|242264874|gb|ACS89556.1| Threonyl-tRNA synthetase [Thermococcus sibiricus MM 739]
          Length = 625

 Score =  127 bits (320), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 107/411 (26%), Positives = 183/411 (44%), Gaps = 29/411 (7%)

Query: 241 SEKRDHRKLAREMDLFHIAEDGS--GVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTP 297
           +E+  H K+  E +L    E+GS  G + ++ KG  I   L +Y+  K I+    E+ TP
Sbjct: 202 TEEPPHVKIMLEQELVDY-EEGSDPGNLRYYPKGRLIKSLLENYVTDKVIEYGAMEVETP 260

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + D        + + + A  + VK  D      + F L+   C G   +      SYR 
Sbjct: 261 IMYDFEHPALEKYLNRFPARQYVVKSGD------KRFFLRFAACFGQFLIKKDATISYRH 314

Query: 358 LPVRLAEFGSV-YRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIY 415
           LP+R+ E     +R E  G L GL R+R FT  D H      +Q   E  K + L + + 
Sbjct: 315 LPLRMYELTRYSFRREKRGELSGLRRLRAFTMPDMHTVAKNLQQAMEEFKKQYKLSMEVL 374

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           K  G      +++ R      ++  W++ ++ +  +   I       +   +      ++
Sbjct: 375 KGVGLTPEDYEVAIR-----FTEDFWNENKDFIVDLAGIIGKP----VLIEMWKQRFFYF 425

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
             KFE+   D + +     T+Q+D     RF   Y +   ++ +P+++H +  G+IER +
Sbjct: 426 ILKFEFNFVDNLDKAAALSTVQIDVENSQRFGITYYDEEGQEKYPLLLHCSPSGAIERVM 485

Query: 536 --------GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR 587
                    IM +  K   PLWLSPIQ  +  ++   ++YA  IA  L+   +  + D R
Sbjct: 486 YAILEKQAKIMKKGKKPMYPLWLSPIQVRIIPVSEKYLDYALYIAGKLEGAKIRADVDDR 545

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           NE +N KIRE   + IP II+ G+ E     I +R+       ++ + D I
Sbjct: 546 NERLNKKIREAEKEWIPYIIVVGENEKRMGVITVRKREDNKQYEIQVEDLI 596


>gi|54309339|ref|YP_130359.1| putative tRNA synthetase [Photobacterium profundum SS9]
 gi|46913775|emb|CAG20557.1| putative tRNA synthetase [Photobacterium profundum SS9]
          Length = 145

 Score =  127 bits (318), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 58/130 (44%), Positives = 82/130 (63%)

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANL 574
           +E+  PVMIHRA+ GS+ERFIGI+IE + G  P WLSP QA+V  IT S  EY QEI   
Sbjct: 5   NERHTPVMIHRAILGSLERFIGILIEEYAGFFPTWLSPQQAVVMNITDSQSEYVQEIVKK 64

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           L+   + +  D RNE I +KIREH++K++P +++CGDKE     I +R        K+ +
Sbjct: 65  LQKCGIRVNADLRNEKIGFKIREHTLKRVPYMLVCGDKEVEAGEIAVRTRKGKDLGKLKI 124

Query: 635 LDAIPILTKE 644
            + +  L +E
Sbjct: 125 DELVAFLQQE 134


>gi|116754480|ref|YP_843598.1| threonyl-tRNA synthetase [Methanosaeta thermophila PT]
 gi|121694718|sp|A0B8D4|SYT_METTP RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|116665931|gb|ABK14958.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Methanosaeta
           thermophila PT]
          Length = 619

 Score =  126 bits (316), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 111/418 (26%), Positives = 194/418 (46%), Gaps = 39/418 (9%)

Query: 236 YFLEESEKRD----HRKLAREMDLFHIAEDGS--GVIFWHRKGWKIFQTLISYMR-RKIK 288
           Y +E+S   D    H +L R ++L    E GS  G + ++ KG  +   L SY+  R ++
Sbjct: 188 YEIEKSRAVDRIPPHVELMRRLELVDY-EPGSDPGNMRYYPKGRLVKSLLESYVTDRALE 246

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
               E+ TP + D        + D + A  +A++       D +   L+   C G   + 
Sbjct: 247 MGAMEVETPVMYDMDHPTLKKYLDRFPARQYAIEA------DKKHLFLRFAACFGQFLMG 300

Query: 349 NHGLKSYRELPVRLAEFGSV-YRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLK 406
           +    SYR LP+R+ E     +R E  G L GL R+R FT  D H FC        E  K
Sbjct: 301 HDMTFSYRSLPLRMFELTRYSFRREQRGELVGLRRLRAFTMPDMHTFCGDMSSAMEEFRK 360

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
            +   IS+ +D G +    +++ R  K       +++ +  ++G++D +     D+    
Sbjct: 361 QYEASISVLRDAGLDLKDYEVAIRFTK-----DFYENNKTFIEGLVDIV-----DKPVLI 410

Query: 467 VLLGEGAFYGP-KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
            +  E  FY   KFE+   DA+ +     T+Q+D     R++  YV++   +  P+++H 
Sbjct: 411 EMWDERFFYFVLKFEFNFVDALDKASALSTVQIDVENAERYDIGYVDAEGNRQRPIILHC 470

Query: 526 AVFGSIERFIGIMIEN-----FKGNLPL---WLSPIQAIVTTITSSAVEYAQEIANLLKS 577
           +  G+IER +  ++E        G LP+   WLSP Q  +  +       A E+A  L  
Sbjct: 471 SPSGAIERLMYALLEKQAMIAANGGLPMLPTWLSPTQVRIIPVAERHHARAMEVAEQL-- 528

Query: 578 HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR-RFGSTTTQKVSL 634
            +  ++ D R+ET+  KIR+   + +P + + GD+E S   + +  R  ST+ QK+ +
Sbjct: 529 -NFRVDVDDRDETVGKKIRDAGREWVPYVAVVGDEELSTGLLTVTVRSESTSNQKIKM 585


>gi|167044354|gb|ABZ09032.1| putative anticodon binding domain protein [uncultured marine
           crenarchaeote HF4000_APKG6C9]
          Length = 616

 Score =  125 bits (315), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 95/392 (24%), Positives = 185/392 (47%), Gaps = 36/392 (9%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKDDYE--EINTPQVLDQHLWQQSGHWDSYRANMFA 320
           SG + ++  G  I   +  Y+  K++D Y   E+ TP + D H      +++ + A  ++
Sbjct: 216 SGNMRFYPNGRLIKSQIEQYVTDKVRD-YGGIEVETPIMYDSHHPSMESYFNRFPARQYS 274

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV-YRNEPSGSLHG 379
           +        + R   L+   C G   + +    SY+ LP +L E     +R E SG L G
Sbjct: 275 IDS------EGRHLFLRFSACFGQFLMASDFQLSYKNLPYKLYELTRYSFRREQSGELVG 328

Query: 380 LMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD 438
           L R+R FT  D H FC    Q  +E  K  +L   +    G E+   +   R      ++
Sbjct: 329 LRRLRAFTMPDCHAFCKDMPQAIDEFGKRFDLSREVLSGLGIEENDYETGIR-----FTE 383

Query: 439 ALWDDAENIMKGVLDTIKNSSQDRINTGVLL---GEGAFYGP-KFEYILKDAIGRDWQCG 494
             ++  + ++K ++         ++   VL+    E  FY   K+E+   D +GR     
Sbjct: 384 DFYNKNKELIKQMVS--------KVGKPVLVEMWKEKFFYFVLKWEFNFVDDLGRASALS 435

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF--------KGNL 546
           T Q+D     R+   + +  +E+ +P+++H +  G++ER I  ++E F        +   
Sbjct: 436 TDQIDVENAKRYGITFTDEKNEQQYPIILHNSPSGAVERVIYALLEKFAKQIKDGKRPQF 495

Query: 547 PLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPII 606
           PLWL+PIQ  +  +    +E++ ++AN L   ++ ++ D RN+TI  +IR+   + I  +
Sbjct: 496 PLWLAPIQVRLIPLKDDFLEFSSDLANKLTEQNIRVDIDDRNDTIGKRIRDAEKEWISYV 555

Query: 607 IICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           ++ G++E +  S+ +R   +   +++S+ D +
Sbjct: 556 LVIGEREVNSSSLSVRDRTTGDVRQLSIEDFV 587


>gi|305663857|ref|YP_003860145.1| threonyl-tRNA synthetase [Ignisphaera aggregans DSM 17230]
 gi|304378426|gb|ADM28265.1| threonyl-tRNA synthetase [Ignisphaera aggregans DSM 17230]
          Length = 617

 Score =  125 bits (315), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 94/349 (26%), Positives = 156/349 (44%), Gaps = 34/349 (9%)

Query: 310 HWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVY 369
           H + +   M+ V+  +D       + L+   C    ++    + SYR+LP+ + E    Y
Sbjct: 262 HAELFGERMYEVRIDNDR------YILRFAACYQQFSILKDWVLSYRDLPMGMFEIADSY 315

Query: 370 RNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLS 428
           R E  G L    R+R F   D H+     E+     + + N I+   +  G E       
Sbjct: 316 RYEQRGELVLGFRLRRFHMPDLHILTKDLEEAKRIAMIVRNKIVEEARKIGRE------- 368

Query: 429 TRPEKRVGSDALWDDAENIMKGVLDTIKN--SSQDRINTGVLLGEGAFYGP-KFEYILKD 485
                     A+++  E+      + I     ++ +    VL   G +Y     EYI+ D
Sbjct: 369 --------YQAIYNITEDFFNTNFEYIVELVRAEGKPVLVVLYPPGLYYWVINVEYIIID 420

Query: 486 AIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI------ 539
            + R  +  T Q+D     RF   YV+ +  + HP++IH A+ GS+ER+I ++       
Sbjct: 421 ELKRPREIATWQIDVGNAKRFGIKYVDENGVERHPIIIHTAILGSVERYIYMVFDTVARS 480

Query: 540 --ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
             EN    LPLWLSPIQ  V  I+   + YA  +A  L  H + ++ D R+E++  KIR+
Sbjct: 481 ESENKPPTLPLWLSPIQVRVIPISKETLTYAINVAKELSRHGIRVDIDDRDESLGKKIRD 540

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
             I+ IP +I+ G++E    +I + R      Q+V  +D    L  E L
Sbjct: 541 AGIEWIPYVIVIGEREMKTGTINV-RIRKDGIQRVMHIDEFIKLINEEL 588


>gi|149191774|ref|ZP_01870012.1| threonyl-tRNA synthetase [Vibrio shilonii AK1]
 gi|148834354|gb|EDL51353.1| threonyl-tRNA synthetase [Vibrio shilonii AK1]
          Length = 146

 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 53/113 (46%), Positives = 77/113 (68%)

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQ 569
           YV+ ++E+  PVMIHRA+ GS+ERFIGI+IE + G  P WLSP QA++  IT    +Y Q
Sbjct: 2   YVDENNERQVPVMIHRAILGSLERFIGILIEEYAGFFPTWLSPEQAVIMNITDKQSDYVQ 61

Query: 570 EIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           E+   L+   +  + D RNE I +KIREH++K+IP +++CGD+E     I +R
Sbjct: 62  EVTQKLQKSGIRAKADLRNEKIGFKIREHTLKRIPYMLVCGDQEMEAGEIAVR 114


>gi|254172046|ref|ZP_04878722.1| threonyl-tRNA synthetase [Thermococcus sp. AM4]
 gi|214033942|gb|EEB74768.1| threonyl-tRNA synthetase [Thermococcus sp. AM4]
          Length = 624

 Score =  125 bits (313), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 102/406 (25%), Positives = 179/406 (44%), Gaps = 29/406 (7%)

Query: 246 HRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           H KL  E +L  +    DG G + ++ KG  I   L  Y+  K+ +    E+ TP + D 
Sbjct: 206 HVKLMLEHELVDYEPGSDG-GNLRYYPKGRLIKGLLEQYVTEKVVEYGAMEVETPIMYDF 264

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
                  + + + A  + VK  D      + F L+   C G   +    + SYR LP+R+
Sbjct: 265 EHPALEKYLNRFPARQYIVKSGD------KKFFLRFAACFGQFLIKKDAIISYRHLPLRM 318

Query: 363 AEFGSV-YRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGF 420
            E     +R E SG L GL R+R FT  D H      +Q  +E  K + L + + +  G 
Sbjct: 319 YELTRYSFRREKSGELSGLRRLRAFTMPDMHTVAKDLKQAMDEFKKQYKLSMEVLRGVGL 378

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
                +++ R      +   W++  + +  +   I       +          ++  KFE
Sbjct: 379 TPDDYEVAIR-----FTRDFWEENRDFIVELAKIIGKPVLIEMWDQRFF----YFILKFE 429

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           +   D + +     T+Q+D     RF   Y +   ++ +P+++H +  G+IER +  ++E
Sbjct: 430 FNFVDNLDKAAALSTVQIDVENAERFGITYYDEEGKERYPLILHCSPSGAIERVMYAILE 489

Query: 541 N--------FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
                     K   PLWLSPIQ  V  ++   ++YA  +A  L+   + ++ D  N+ +N
Sbjct: 490 KQAKLQAQGKKPAFPLWLSPIQVRVIPVSDDVMDYALYVAGKLEGAKIRVDVDDTNDRLN 549

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
            KIR+   + IP II+ G  E  + ++ +RR       ++ L D I
Sbjct: 550 KKIRKAEKEWIPYIIVVGKNEKEQNTVTVRRREDGKQLEMQLEDLI 595


>gi|14590578|ref|NP_142646.1| threonyl-tRNA synthetase [Pyrococcus horikoshii OT3]
 gi|8928366|sp|O58430|SYT_PYRHO RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|3257107|dbj|BAA29790.1| 625aa long hypothetical threonyl-tRNA synthetase [Pyrococcus
           horikoshii OT3]
          Length = 625

 Score =  125 bits (313), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 105/391 (26%), Positives = 173/391 (44%), Gaps = 29/391 (7%)

Query: 246 HRKLAREMDLFHIAEDGS--GVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQ 302
           H KL  E +L    E GS  G + ++ KG  I   L  Y+  K I+    E+ TP + D 
Sbjct: 207 HVKLMLEHELVDY-EPGSDPGNLRYYPKGRLIKSLLEQYVTEKVIEYGAMEVETPVMYDF 265

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
                  + + + A  + V   D      + + L+   C G   +    + SYR LP+R+
Sbjct: 266 EHPALEKYLNRFPARQYIVLSGD------KKYFLRFAACFGQFLISKDAVISYRHLPLRM 319

Query: 363 AEFGSV-YRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGF 420
            E     +R E  G L GL R+R FT  D H      EQ  +E  K   L + + K  G 
Sbjct: 320 YELTRYSFRREKRGELSGLRRLRAFTMPDMHTLAKDLEQAKDEFKKQFKLSMEVLKGVGL 379

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
                +++ R      ++  W +  + +  ++  I       +          ++  KFE
Sbjct: 380 TPEDYEVAIR-----FTEDFWKENRDFIVELVKIIGKPVLIEMWKQRFF----YFILKFE 430

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI----- 535
           +   D + +     T+Q+D     RF   Y + + E+ +P+++H +  G+IER +     
Sbjct: 431 FNFVDNLDKAAALSTVQIDVENAERFGIKYYDENGEEKYPLILHCSPSGAIERVMYAILE 490

Query: 536 ---GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
               +M E  K  LPLWLSPIQ  V  ++   ++YA  IA  L+   + ++ D  +E +N
Sbjct: 491 KQAKLMQEGKKPMLPLWLSPIQVRVIPVSEEYLDYALYIAGKLEGARIRVDVDDEDERLN 550

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRR 623
            KIR    + IP I++ G KE    +I +RR
Sbjct: 551 KKIRRAEKEWIPYIVVVGAKEKESGTITVRR 581


>gi|222833149|gb|EEE71626.1| predicted protein [Populus trichocarpa]
          Length = 152

 Score =  124 bits (312), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 56/116 (48%), Positives = 79/116 (68%), Gaps = 4/116 (3%)

Query: 502 LPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT 561
           +P R +A YV    ++  PVM+HRA+ GS+ERFIGI+IE   G +P WL+P+QA V  IT
Sbjct: 1   MPERLDAEYVGEDGDRHRPVMLHRAIVGSLERFIGILIEQHAGAMPTWLAPVQAAVLNIT 60

Query: 562 SSAVEYAQEIANLLK----SHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
            +  +Y +E+A  L+    +  L + TD RNE I YKIREHS++K+P I++ GDKE
Sbjct: 61  DAQADYVREVAQKLQKAFPNQGLRVATDLRNEKITYKIREHSLQKLPYILVAGDKE 116


>gi|119873200|ref|YP_931207.1| threonyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
 gi|166225488|sp|A1RV82|SYT_PYRIL RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|119674608|gb|ABL88864.1| Anticodon-binding domain protein [Pyrobaculum islandicum DSM 4184]
          Length = 609

 Score =  124 bits (312), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 86/326 (26%), Positives = 153/326 (46%), Gaps = 28/326 (8%)

Query: 310 HWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVY 369
           H   +   ++ V+   D I       L+   C    A+    + SY+ LP  + E    Y
Sbjct: 264 HARLFGERLYVVESDTDLI-------LRYAACFQQFAMVKDWVISYKHLPFGVIEIADSY 316

Query: 370 RNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLS 428
           R+E  G    L R+R F   D H+F     +  +   K+H +I    +  G  +  V L 
Sbjct: 317 RHEQPGETVLLFRLRRFFMPDLHIFTRDMAEAIDISFKLHEVIFREIEKLG--RTYVSLY 374

Query: 429 TRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIG 488
              E+       + + +N +   ++  K   +  I   +L G+  ++    E+ + D +G
Sbjct: 375 NVTEE------FYKEYKNYL---IELAKREGKP-ILVRILPGQKYYWVLNVEFHIIDELG 424

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG---- 544
           R  +  T Q+D     RF   YV+ +++  +PV+IH A+ GS+ER++ ++ +        
Sbjct: 425 RPREIATFQIDIGNAKRFGIKYVDENNQVRYPVIIHTAILGSVERYLYVVFDTMAKAEKA 484

Query: 545 ----NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
                LP WLSP+Q  +  IT   ++YA EIA+ L++  + ++ D R+ET++ KIR+  +
Sbjct: 485 GKIPRLPTWLSPVQVRIIPITRDNLKYAVEIADKLETEGIRVDIDDRDETLSKKIRDAEV 544

Query: 601 KKIPIIIICGDKEASERSIGIRRFGS 626
             IP I + G KE +E  + +R  G 
Sbjct: 545 SWIPYICVVGSKEETEGVLSVRERGG 570


>gi|41614972|ref|NP_963470.1| threonyl-tRNA synthetase [Nanoarchaeum equitans Kin4-M]
 gi|73919808|sp|Q74MP3|SYT_NANEQ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|40068696|gb|AAR39031.1| NEQ177 [Nanoarchaeum equitans Kin4-M]
          Length = 633

 Score =  124 bits (312), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 89/318 (27%), Positives = 146/318 (45%), Gaps = 24/318 (7%)

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
           D   F L+   C    A+      SY+ +P  + E    YR E  G +    R+R F   
Sbjct: 303 DKSVFVLRYAACFQQFAIAKDLTLSYKNVPFGMLEVADSYRFEQPGEVVLAFRLRKFYMP 362

Query: 390 DAHVFCTK-----EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
           D HVF        EQ  N   KI   I  I +D+   ++++ +++  +       +    
Sbjct: 363 DLHVFTKDLDEAVEQFLNMHKKIMEEIKKIGRDY---ELLINVASFEDYEKYKYIIEQIY 419

Query: 445 ENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPS 504
           +++ K +L  I   S  R           ++    EY + D +GR  + GT Q+D +   
Sbjct: 420 KDVKKPLLLAIYPKSDQR-----------YWIINIEYHIIDVLGRPREIGTTQIDLHNSK 468

Query: 505 RFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF----KGNLPLWLSPIQAIVTTI 560
           RF   Y++    + H +++H A+ GSIER+I  + +      K  LP W+SP+Q  V  +
Sbjct: 469 RFGIKYIDKDGSEKHVIILHNAILGSIERYIYALFDTALRKEKPVLPFWISPVQVRVIPV 528

Query: 561 TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
           +   +EYA++IA  L+S    +E D R+ET+N KI++     +P II+ G+KE     I 
Sbjct: 529 SEKYLEYAEQIAKELES-KFRVELDDRDETLNKKIKDAESLWVPYIIVIGEKEIKNNKIT 587

Query: 621 IRRFGSTTTQKVSLLDAI 638
           +R        + SL D I
Sbjct: 588 VRDRYENKVYETSLEDLI 605


>gi|325048295|emb|CBX25717.1| hypothetical protein [Trichinella spiralis]
          Length = 310

 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 77/250 (30%), Positives = 132/250 (52%), Gaps = 10/250 (4%)

Query: 5   IKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEII 62
           I +T PDG  ++      +  D+   ++  +  + +   ++G + DL  P+ +  +++ +
Sbjct: 58  ITVTLPDGKEVEAMAWRTSPLDIMTKLN--MGGRPIVSKVDGVLWDLERPLEKSCNLQFL 115

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQ 121
             +D     V  HS AH++ EA + ++    +  GP IE+GFYYD F  ++  +++++ +
Sbjct: 116 LFDDDEGKQVFWHSTAHVLGEAAERLFG-CCLCYGPPIENGFYYDMFMDDRTVTAEDMDK 174

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           + K M+  I    PF +  L  E+  E+F  K   +K+ ILE+       T YR G   D
Sbjct: 175 LAKIMKAAIDGKQPFERLELKKEELMEMF--KYNPFKLRILENKVKTPTTTAYRCGPLID 232

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHVR TG +   FK+ K +  +W GDS+   L R+YG ++   ++L  +     E+
Sbjct: 233 LCRGPHVRHTGLLNS-FKITKNSSTFWEGDSSMESLQRVYGVSFPNSKQLN-FGKDEGEA 290

Query: 242 EKRDHRKLAR 251
             RDHRKL R
Sbjct: 291 ASRDHRKLGR 300


>gi|212223522|ref|YP_002306758.1| threonyl-tRNA synthetase [Thermococcus onnurineus NA1]
 gi|229558459|sp|B6YTH4|SYT_THEON RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|212008479|gb|ACJ15861.1| Threonyl-tRNA synthetase [Thermococcus onnurineus NA1]
          Length = 627

 Score =  123 bits (308), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 101/406 (24%), Positives = 180/406 (44%), Gaps = 29/406 (7%)

Query: 246 HRKLAREMDLFHIAEDGS--GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           H ++  E +L    E GS  G + ++ KG  I   L  Y+  K+ +    E+ TP + D 
Sbjct: 209 HVRIMLEQELVDY-EPGSDPGNLRYYPKGRLIKGLLEQYVTEKVVEYGAMEVETPIMYDF 267

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
                  + + + A  + VK  D      + F L+   C G   +    + SYR LP+R+
Sbjct: 268 EHPALEKYLNRFPARQYIVKSGD------KKFFLRFAACFGQFLIKKDAIISYRNLPLRM 321

Query: 363 AEFGSV-YRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGF 420
            E     +R E SG L GL R+R FT  D H      +Q   E  K + L + + K  G 
Sbjct: 322 YELTRYSFRREKSGELSGLRRLRAFTMPDMHTVARDLKQAMAEFKKQYKLSMEVLKGVGL 381

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
                +++ R      ++  W++  + +  +   I       +   +      ++  KFE
Sbjct: 382 TPEDYEVAIR-----FTEDFWNENRDFIVELAKIIGKP----VLIEMWKQRFFYFILKFE 432

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           +   D + +     T+Q+D     RF   Y +   ++ +P+++H +  G+IER +  ++E
Sbjct: 433 FNFVDNLDKAAALSTVQIDVENAERFGITYYDEDGKEKYPLILHCSPSGAIERVMYAILE 492

Query: 541 N--------FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
                     K   PLWLSPIQ  V  ++   ++YA  +A  L+   + ++ D  ++ +N
Sbjct: 493 KQAKLQSKGIKPMFPLWLSPIQVRVIPVSEEVLDYALYVAGKLEGAKIRVDVDDTSDRLN 552

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
            KIR+   + IP +I+ G  E  + +I +RR       ++ L D I
Sbjct: 553 KKIRKAEKEWIPYVIVVGRNEKEQNTITVRRRSDGKQGEMQLEDLI 598


>gi|126465876|ref|YP_001040985.1| threonyl-tRNA synthetase [Staphylothermus marinus F1]
 gi|166225505|sp|A3DN67|SYT_STAMF RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|126014699|gb|ABN70077.1| threonyl-tRNA synthetase [Staphylothermus marinus F1]
          Length = 614

 Score =  123 bits (308), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 88/325 (27%), Positives = 149/325 (45%), Gaps = 21/325 (6%)

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
           D   F L+   C    A+    + SY+ LP  + E    YR E  G L+   R+R F   
Sbjct: 278 DNEKFVLRYAACHQQFAMLRDWIISYKNLPFGMFEVADSYRLEQRGELNLCFRLRKFYMP 337

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMK 449
           D H+     +  NE +KI  ++         +KI+ +++    K V    +  D  +  +
Sbjct: 338 DLHIL---NRDLNEAIKISRIVQ--------DKILEEIAKIGRKYVALYNVTSDFFDKYR 386

Query: 450 GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAF 509
            +L          +   V+     ++    EY + D + R  +  T Q+D     RFN  
Sbjct: 387 DILIEFVRRENYPVLVSVIPSGIYYWVLNVEYHIIDNLNRPREIATFQIDIGNGERFNIT 446

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMI--------ENFKGNLPLWLSPIQAIVTTIT 561
           Y +   EK HPV+IH A+ G IERFI  +         E     +P WL+P+Q  +  I 
Sbjct: 447 YTDEKGEKHHPVIIHTAIIGGIERFIYTIFDTAALMEKEGKTPYIPTWLAPVQVRIIPIK 506

Query: 562 SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
           +  ++YA+++A  +++    ++ D R E++  KIR+   + IP I++ G++E    +I +
Sbjct: 507 NEYLDYAEKVAEKIENAGFRVDIDDRGESLGKKIRDAGREWIPYIVVIGEREVRSNTINV 566

Query: 622 RRFGSTTTQKVSLLDA-IPILTKES 645
            R   T  QKV + D  I IL +E+
Sbjct: 567 -RIRRTNDQKVMVTDELIRILEEET 590


>gi|167945769|ref|ZP_02532843.1| Threonyl-tRNA synthetase, class IIa [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 165

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 61/147 (41%), Positives = 92/147 (62%), Gaps = 1/147 (0%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPE 65
           +T PDGS + F    +  +VA  I   LAK  +A  +NG++ D S  +   S + IIT  
Sbjct: 18  ITLPDGSTRRFDNPVSVYEVAADIGPGLAKATLAGRVNGELVDASFLMEADSELAIITSR 77

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D  +L ++RH  AH+MA+AVQ ++P  QV IGP IE+GFYYDF +E+PF+ D+L +IE++
Sbjct: 78  DEAALELMRHDAAHVMAQAVQELYPGTQVTIGPAIENGFYYDFAREEPFTPDDLKKIEQR 137

Query: 126 MQEIIARDSPFLKQYLSHEKARELFES 152
           M EI+ RD P  ++     +A + F +
Sbjct: 138 MHEIVKRDLPLQREVWDRAEAIKNFRA 164


>gi|224178769|ref|XP_002199495.1| PREDICTED: hypothetical protein, partial [Taeniopygia guttata]
          Length = 333

 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 70/211 (33%), Positives = 120/211 (56%), Gaps = 6/211 (2%)

Query: 43  INGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE 101
           +NG++ DL  P+  + ++E++T ++  + AV  HS AHI+ EA++  +    +  GP IE
Sbjct: 3   VNGELWDLDRPLEGDCTLELLTFDNEEAKAVYWHSSAHILGEAMEGYFGGC-LCYGPPIE 61

Query: 102 DGFYYD-FDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVE 160
           +GF+YD + +++  SS E   +E + + II     F +  +  E   ++F+  K  +K  
Sbjct: 62  NGFHYDMYIEDRSVSSTEFPLLENRCKNIIKEKQAFERLEVKKEILLDMFKYNK--FKCR 119

Query: 161 ILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRI 220
           IL         T+YR G   DLC+GPHVR TG++K   K++K +  YW G S+   L RI
Sbjct: 120 ILNEKVKTPTTTVYRCGPLIDLCKGPHVRHTGKIKAL-KIIKSSSTYWEGKSDMETLQRI 178

Query: 221 YGTAWNTQQELTQYLYFLEESEKRDHRKLAR 251
           YG ++   + + ++    EE++ RDHRK+ +
Sbjct: 179 YGISFPDNKMMKEWEKIQEEAKNRDHRKIGK 209



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 51/99 (51%), Positives = 67/99 (67%), Gaps = 1/99 (1%)

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           +F H  +S+RELP+RLA+FG ++RNE SG+L GL RVR F QDDAH+FCT EQ+  E   
Sbjct: 235 MFAHRPRSWRELPLRLADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCTMEQIEEEIKD 294

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
             + + S+Y  FGF    + LSTRPE  +G   +WD AE
Sbjct: 295 CLDFLKSVYAVFGF-TFQLHLSTRPENYLGDLEIWDHAE 332


>gi|284161285|ref|YP_003399908.1| threonyl-tRNA synthetase [Archaeoglobus profundus DSM 5631]
 gi|284011282|gb|ADB57235.1| threonyl-tRNA synthetase [Archaeoglobus profundus DSM 5631]
          Length = 618

 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 111/457 (24%), Positives = 203/457 (44%), Gaps = 44/457 (9%)

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYW---RGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           +L R   V    +V +  K  +   +YW     D     + +   T +   ++  +Y   
Sbjct: 126 ELSRSIVVEEEKEVTQALKAEEKVKSYWFILTPDKELVEVEKFDFTGYENLRKFARY--- 182

Query: 238 LEESEKR-------DHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-I 287
             E EKR        H +L + +++  +  A D SG + ++ KG  I   L  ++  K I
Sbjct: 183 --EMEKRRAVDKIPPHVELMKRLEIADYEPASD-SGHLRYYPKGRLIKSLLEEFVTLKCI 239

Query: 288 KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
           +    E+ TP + D+       + + + A  + +K       D R F L+   C G   +
Sbjct: 240 EYGAMEVETPIMYDRSHPTLRRYLERFPARQYIIKG------DKREFFLRFAACFGQFLI 293

Query: 348 FNHGLKSYRELPVRLAEFGSV-YRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECL 405
            +  + +Y+ LP++L E     +R E  G L GL R+R FT  D H F    EQ   E  
Sbjct: 294 AHDSVITYKNLPMKLYELTRYSFRKEQRGELVGLRRLRAFTMPDMHTFVRDMEQAKQEFF 353

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
             + L + + K  G +    +++ R  K       ++  +  +  ++D ++      I  
Sbjct: 354 NQYKLSVEVLKGIGIDPEDYEVAVRVTK-----DFYEQNKEFIHSLVDILRKP----ILV 404

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
            +      ++  KFE+   DA+ +     T+Q+D     R++  YV+ + EK  P+++H 
Sbjct: 405 EMWDQRFFYFVLKFEFNFVDALEKASALSTVQIDVENAERYDISYVDENGEKKRPLILHC 464

Query: 526 AVFGSIERFIGIMIENFKGN--------LPLWLSPIQAIVTTITSSAVEYAQEIANLLKS 577
           ++ G+IER +  ++E    N        LP+WLSP Q  V  ++   ++ A E+AN L  
Sbjct: 465 SLSGAIERCMYALLEKAHMNMERGKLPMLPVWLSPTQVRVIPVSERYLDRAIEVANELSR 524

Query: 578 HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
             +  + D R+ET+  KIR+   + IP + + G+ E 
Sbjct: 525 RGIRADVDDRDETLGKKIRDAGREWIPYVAVIGEDEV 561


>gi|240103065|ref|YP_002959374.1| threonyl-tRNA synthetase [Thermococcus gammatolerans EJ3]
 gi|259516771|sp|C5A5J8|SYT_THEGJ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|239910619|gb|ACS33510.1| Threonyl-tRNA synthetase (thrS) [Thermococcus gammatolerans EJ3]
          Length = 626

 Score =  122 bits (306), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 107/409 (26%), Positives = 182/409 (44%), Gaps = 35/409 (8%)

Query: 246 HRKLAREMDLFHIAEDGS--GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           H +L  E +L    E GS  G + ++ KG  I   L  Y+  K+ +    E+ TP + D 
Sbjct: 208 HVRLMLEHELVDY-EPGSDAGNLRYYPKGRLIKGLLEQYVTEKVVEYGAMEVETPIMYDF 266

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
                  + + + A  + VK  D      + F L+   C G   +    + SYR LP+R+
Sbjct: 267 EHPALEKYLNRFPARQYIVKSGD------KKFFLRFAACFGQFLIKKDAIISYRNLPLRM 320

Query: 363 AEFGSV-YRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGF 420
            E     +R E SG L GL R+R FT  D H      +Q  +E  K + L + + +  G 
Sbjct: 321 YELTRYSFRREKSGELSGLRRLRAFTMPDMHTVAKDLKQAMDEFKKQYKLSMEVLRGVGL 380

Query: 421 EKIMVKLSTRPEK---RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
                +++ R          D + + A+ I K VL  + +    R    +L         
Sbjct: 381 TPDDYEVAIRFTHDFWEANKDFIVELAKIIGKPVLIEMWDQ---RFFYFIL--------- 428

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           KFE+   D + +     T+Q+D     RF   Y +   ++ +P+++H +  G+IER +  
Sbjct: 429 KFEFNFVDNLDKAAALSTVQIDVENAERFGITYYDEEGKERYPLILHCSPSGAIERVMYA 488

Query: 538 MIEN--------FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE 589
           ++E          K   PLWLSPIQ  V  ++   ++YA  +A  L+   + ++ D  N+
Sbjct: 489 ILEKQAKLQAQGKKPMFPLWLSPIQVRVIPVSDDVLDYALYVAGKLEGAKIRVDVDDTND 548

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
            +N KIR+   + +P II+ G  E  + ++ +RR       ++ L D I
Sbjct: 549 RLNKKIRKAEKEWVPYIIVVGKNEKEQNTVTVRRREDGKQVEMQLEDLI 597


>gi|119719664|ref|YP_920159.1| threonyl-tRNA synthetase [Thermofilum pendens Hrk 5]
 gi|166225513|sp|A1RY76|SYT_THEPD RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|119524784|gb|ABL78156.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Thermofilum
           pendens Hrk 5]
          Length = 608

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 87/306 (28%), Positives = 139/306 (45%), Gaps = 23/306 (7%)

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
           D +   L+   C    A+      SYR+LP    E    YR E  G L    R+R F   
Sbjct: 275 DEKKLILRYAACHQQFAMVKDWEISYRDLPFGAFEVADSYRLEQPGELLLCFRLRKFYMP 334

Query: 390 DAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIM 448
           D HVFC    +      +IH+ I    +  G + + +   TR       D L    E   
Sbjct: 335 DLHVFCKDLAEAMEVSFRIHSKIYEEIRKLGRDYVSIYNLTRSFLEQHRDYLKRLVEMEG 394

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGP-KFEYILKDAIGRDWQCGTIQVDFNLPSRFN 507
           K VL                + EG +Y     EY + D +GR  + GT Q+D     RF 
Sbjct: 395 KPVLLH-------------FVPEGKYYWVINVEYNIIDELGRPREIGTFQIDVGNAERFG 441

Query: 508 AFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG--------NLPLWLSPIQAIVTT 559
             YV+ ++ + +PV+IH A+ GS+ER++  +++            +LPLWLSP+Q  V  
Sbjct: 442 ITYVDENNTRRYPVIIHTAIIGSLERYVFAVLDTAAKKARAGEVPSLPLWLSPVQVRVIP 501

Query: 560 ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSI 619
            +S  ++ A  IA+ L+   + ++ D R E++  +IR+  +K IP +++ G +EA    +
Sbjct: 502 HSSEYLKLADSIADKLEEQGIRVDVDDREESLAKRIRDAEVKWIPYVVVVGKREAESGKL 561

Query: 620 GIRRFG 625
            +R  G
Sbjct: 562 TVRVRG 567


>gi|18312849|ref|NP_559516.1| threonyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
 gi|22654124|sp|Q8ZWK4|SYT_PYRAE RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|18160337|gb|AAL63698.1| threonyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
          Length = 608

 Score =  121 bits (304), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 89/320 (27%), Positives = 147/320 (45%), Gaps = 24/320 (7%)

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC 395
           L+   C    A+    + SY+ LP  + E    YR+E  G    L R+R F   D H+F 
Sbjct: 282 LRYAACFQQFAMAKDWVISYKHLPFGMLEIADSYRHEQPGETVLLFRLRRFYMPDLHIFT 341

Query: 396 T--KEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
              KE M     K+H +I       G   + +   T    +   D L + A    K +L 
Sbjct: 342 KDLKEAM-EVTYKLHEVIFREIGKLGRTYVSLYNVTEGFYKNHRDYLVELARREGKPIL- 399

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS 513
                        VL G+  ++    E+ + D +GR  +  T Q+D     RF   YV+ 
Sbjct: 400 -----------VRVLPGQKYYWVLNVEFHIVDELGRPREIATFQIDVGNAQRFGIKYVDE 448

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIMIENFKG--------NLPLWLSPIQAIVTTITSSAV 565
           +++  +PV+IH A+ GS+ER++  + +             LP WLSP+Q  V  ++   +
Sbjct: 449 NNQIKYPVIIHTAILGSVERYLYAVFDTMAKMEKEGKVPRLPTWLSPVQVRVIPVSKENL 508

Query: 566 EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
           +YA  IA++L++  + ++ D R ET++ KIR+     IP I++ G KE +E  I +R  G
Sbjct: 509 KYAISIADVLEAEGIRVDIDDREETLSKKIRDAETSWIPYIVVVGSKEEAEGVIAVRERG 568

Query: 626 STTTQKVSLLDAIPILTKES 645
                K+ L + +  L  E+
Sbjct: 569 G-GQYKIRLEELVKKLKDET 587


>gi|21229406|ref|NP_635328.1| threonyl-tRNA synthetase [Methanosarcina mazei Go1]
 gi|34395862|sp|Q8PRY4|SYT_METMA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|20907999|gb|AAM33000.1| Threonyl-tRNA synthetase [Methanosarcina mazei Go1]
          Length = 634

 Score =  121 bits (304), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 115/453 (25%), Positives = 207/453 (45%), Gaps = 51/453 (11%)

Query: 194 VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR------DHR 247
           V +  K    A +YWR  +    L  + G       +L Q++ + E S+ R       H 
Sbjct: 158 VSEALKAEGTARSYWRILTPDGELHEVEGFDLTPYPKLQQFVNY-EISKSRAVERAPPHV 216

Query: 248 KLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDY--EEINTPQVLDQH 303
           +L R ++L  +    D SG + ++ KG ++ ++L+      +  ++   E+ TP + D +
Sbjct: 217 ELMRRLELADYEPGSD-SGNMRYYPKG-RLVKSLLENYVLDVATEFGAMEVETPLMYDMN 274

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRL 362
                 + D + A  ++++       D R   L+   C G   + NH +  SY+ LP+R+
Sbjct: 275 HPTLKKYLDRFPARQYSIES------DKRHMFLRFAACFGQF-LMNHDMTISYKNLPLRM 327

Query: 363 AEFGSV-YRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGF 420
            E     +R E  G L GL R+R FT  D H  C   +Q  N+  + ++L IS+ ++ G 
Sbjct: 328 IEMTRYSFRKEQRGELVGLRRLRAFTMPDMHTLCEDMDQAVNQFKEQYDLCISVLENVGI 387

Query: 421 E----KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
                ++ ++  TR       D + + A+ + K VL  + ++   R    VL        
Sbjct: 388 HINDYEVAIRF-TRDFYEANKDLVVNMAKTVNKPVLVEMWDT---RFFYFVL-------- 435

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
            KFE+   DA+ +     T+Q+D     R++  YVN+  +   P ++H +  G+IER I 
Sbjct: 436 -KFEFNFVDALAKASALSTVQIDVENAERYDISYVNADGKLERPTVLHCSPSGAIERCIY 494

Query: 537 IMIENFKGN--------LPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRN 588
            ++E             LP+WLSP Q  +  I+   + +A+E+A  L       + D   
Sbjct: 495 ALLEKAAMETEEGKVPMLPVWLSPTQVRIVPISEKHIAFAEEVAKKLDFRVDVDDRDL-- 552

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
            +I  K+RE   + +P +++ GDKE  E +I +
Sbjct: 553 -SIGKKVREAGREWVPYVVVIGDKEMEESTINV 584


>gi|530417|emb|CAA83730.1| Thr-tRNA Synthetase 1 [Mycoplasma capricolum subsp. capricolum ATCC
           27343]
          Length = 320

 Score =  121 bits (303), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 80/292 (27%), Positives = 137/292 (46%), Gaps = 15/292 (5%)

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE 163
           F   F  E     D+L  I+  +  ++  +           KA E+  +  + Y  +  +
Sbjct: 37  FSTTFXTEPRLVLDDLKNIQTNINNLLTSNLEIKSNIYDLNKALEILNNDYQKYLAK--Q 94

Query: 164 SIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
                  V +Y   +++ +     + ++  +K    + ++ G+YW  D N  ML R++G 
Sbjct: 95  MYEKYHYVKVYSINDFYMVVNXALILNSNFIK-IIDIEQLTGSYWLNDKNNIMLQRVHGL 153

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISY 282
              +  EL      LE+   RDHR + + +++F   +  G+G+  W   G+ +   +  Y
Sbjct: 154 CATSSSELKNKKVILEDRRSRDHRLINKRLNIFGFDQLVGAGLPLWLPNGFIVKNEIEKY 213

Query: 283 MRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMF----AVKCADDTIKDLRTFALK 337
           +R+K  + DY  + TP +    L++ SGHWD Y  + F      K +D+       F L+
Sbjct: 214 LRQKEWEYDYIPVETPPIGTVELYKTSGHWDHYGEDXFQPFNGGKGSDEQ------FILR 267

Query: 338 PMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
           PMNCP  +AV+N   + YR+LP+R+ E    +R E SGSL GL RV   T D
Sbjct: 268 PMNCPHXIAVYNTNKEXYRDLPLRICEHAIHHRFESSGSLTGLERVXDETTD 319


>gi|171185199|ref|YP_001794118.1| threonyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta]
 gi|229558458|sp|B1YD09|SYT_THENV RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|170934411|gb|ACB39672.1| Threonyl-tRNA synthetase editing domain protein [Thermoproteus
           neutrophilus V24Sta]
          Length = 609

 Score =  121 bits (303), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 79/305 (25%), Positives = 142/305 (46%), Gaps = 31/305 (10%)

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC 395
           L+   C    A+    + SYR+LP  + E    YR E  G    L R+R F   D H+F 
Sbjct: 283 LRYAACFQQFAMVKDWVISYRQLPFGMLEVADSYRLEQPGETVLLFRLRRFYMPDLHIFT 342

Query: 396 TK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD--ALWDDAENIMKG-- 450
               +      ++H    +I+++ G              ++G    +L++  E+  K   
Sbjct: 343 KDLAEAMEVTFRLHE---AIFREIG--------------KLGRTYVSLYNVTEDFYKAHR 385

Query: 451 -VLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAF 509
             L  +       I   VL G+  ++    E+ + D +GR  +  T Q+D     RF   
Sbjct: 386 QYLVELARREGKPILVRVLPGQKYYWVLNVEFHIIDELGRPREIATFQIDVGNAQRFGIK 445

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK--------GNLPLWLSPIQAIVTTIT 561
           YV+ +++  +PV+IH A+ GS+ER++  + +             LP WLSP+Q  +  IT
Sbjct: 446 YVDENNQTRYPVIIHTAILGSVERYLYAVFDTLARAEKEGKAPRLPTWLSPVQVRIIPIT 505

Query: 562 SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
              ++YA E+A+  ++  + ++ D R+ET++ +IR+  +  +P I + G KE +E  + +
Sbjct: 506 RDNLKYAVEVADKFEAEGIRVDVDDRDETLSKRIRDAEVAWVPYICVVGSKEEAEGVVSV 565

Query: 622 RRFGS 626
           R  G 
Sbjct: 566 RERGG 570


>gi|73670405|ref|YP_306420.1| threonyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro]
 gi|121729403|sp|Q467V2|SYT_METBF RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|72397567|gb|AAZ71840.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Methanosarcina
           barkeri str. Fusaro]
          Length = 635

 Score =  121 bits (303), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 115/452 (25%), Positives = 205/452 (45%), Gaps = 49/452 (10%)

Query: 194 VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR------DHR 247
           V +  K    A +YWR  +    L  I         +L Q++ + E S+ R       H 
Sbjct: 159 VSEALKAEDTAKSYWRILTPDGELREIENFDLTPYPKLQQFVDY-EISKSRAVERAPPHV 217

Query: 248 KLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDY--EEINTPQVLDQH 303
           +L R ++L  +    D SG + ++ KG ++ + L+      +  D+   E+ TP + D +
Sbjct: 218 ELMRRLELADYEPGSD-SGNMRYYPKG-RLIKALLENYVLDVATDFGAMEVETPIMYDMN 275

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRL 362
                 + D + A  ++++       D R   L+   C G   + NH +  SYR LP+R+
Sbjct: 276 HPTLKKYLDRFPARQYSIES------DKRQMFLRFAACFGQF-LMNHDMTISYRNLPLRM 328

Query: 363 AEFGSV-YRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGF 420
            E     +R E  G L GL R+R FT  D H  C   +Q  ++  K ++L I + ++ G 
Sbjct: 329 IEMTRYSFRKEQRGELVGLRRLRAFTMPDMHSLCEDMDQAVDQFKKQYDLCIDVLENIGI 388

Query: 421 EKIMVKLSTRPEK---RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
                +++ R  K       + + + A  + K VL  + ++   R    VL         
Sbjct: 389 HIKDYEVAIRFTKDFYESNKELIVNMARTVNKPVLVEMWDT---RFFYFVL--------- 436

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           KFE+   DA+ +     T+Q+D     R++  YVN+  +   P ++H +  G+IER I  
Sbjct: 437 KFEFNFVDALAKASALSTVQIDVENAERYDISYVNADGKLERPTVLHCSPSGAIERCIYA 496

Query: 538 MIENFKGN--------LPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE 589
           ++E             LP+WLSP Q  +  I+   V +A+E++  L      ++ D R+ 
Sbjct: 497 LLEKAAMETEEGKVPMLPVWLSPTQVRIVPISEKHVAFAEEVSQKLDCR---VDIDDRDL 553

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGI 621
           +I  K+RE   + +P +++ GDKE  + +I +
Sbjct: 554 SIGKKVREAGREWVPYVVVIGDKEIEDGTINV 585


>gi|84490351|ref|YP_448583.1| threonyl-tRNA synthetase [Methanosphaera stadtmanae DSM 3091]
 gi|121731075|sp|Q2NE13|SYT_METST RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|84373670|gb|ABC57940.1| ThrS [Methanosphaera stadtmanae DSM 3091]
          Length = 614

 Score =  121 bits (303), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 110/446 (24%), Positives = 196/446 (43%), Gaps = 50/446 (11%)

Query: 225 WNTQQELTQYLYFLEESEKRD------HRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQ 277
           +N + +  + L   EE + +D      H +L RE +L         G I W+ KG  +  
Sbjct: 174 YNYKNKTLRQLVDHEEGKTKDTGKQPPHVRLMREKELASNEPAADVGHIRWYPKGKLVKD 233

Query: 278 TLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFAL 336
            L  Y+ + + +     + TP + D        H + +    + +K         R   L
Sbjct: 234 LLSDYVYQLVTQRGAMPVETPVMYDLANPAIREHAEKFGERQYRLKTKH------RELML 287

Query: 337 KPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV-YRNEPSGSLHGLMRVRGFTQDDAHVFC 395
           +   C G   +      +++ +PV + E  +  +R E  G + GL R+R FT  D H  C
Sbjct: 288 RFACCFGAFRILADSFLTWKNMPVGIYELSTFSFRFERQGEVVGLKRLRAFTMPDFHSVC 347

Query: 396 TKEQMFNE--------CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENI 447
             +    E        C +     + ++ +  F             RV  D  +D+ E+ 
Sbjct: 348 LNDDHAREVFANQVDMCAQTET-DLDVHYEVAF-------------RVTQD-FFDENEDW 392

Query: 448 MKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFN 507
           +K V   +KN+ +  +   V+     ++  K ++   D +GR  +  T+Q+D     RF 
Sbjct: 393 IKEV---VKNNIKKPVLLEVIPKMKHYWNAKVDFAAIDDLGRPIENPTVQMDIQSAKRFG 449

Query: 508 AFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF---KGN---LPLWLSPIQAIVTTIT 561
             Y++ + E+ +P ++H +  GSIER I  ++E     KGN   LPLWL+P Q  +  +T
Sbjct: 450 ITYLDENEEQQYPTILHCSPTGSIERVICSLLEKTSTDKGNKPSLPLWLAPTQVRIIPVT 509

Query: 562 SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
            + ++YA+EI   ++  ++ ++ D   E +  KIR    + IP  I+ GD E    SI +
Sbjct: 510 DNHLDYAKEIYQQIRDSNIRVDIDDTAERVGKKIRNAGKEWIPYTIVVGDNEVENNSISV 569

Query: 622 RRFGSTTTQKVSLLD---AIPILTKE 644
            R    T +++S+ D    I  LTK+
Sbjct: 570 NRRVDNTKEEISIEDLAEEIHTLTKD 595


>gi|148979936|ref|ZP_01815794.1| threonyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
 gi|145961540|gb|EDK26842.1| threonyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
          Length = 156

 Score =  121 bits (303), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 61/153 (39%), Positives = 98/153 (64%), Gaps = 2/153 (1%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  DVA SI   LAK  +A  ++G+  D  D +  + S+EIIT +
Sbjct: 4   ITLPDGSQRQFDNPVSTLDVALSIGPGLAKATIAGRVDGERVDACDLIENDASLEIITAK 63

Query: 66  DP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  AV+ ++PE ++AIGP I++GFYYD D E   + ++L +IEK
Sbjct: 64  DEVDGLEIVRHSCAHLLGHAVKQLFPEAKMAIGPTIDNGFYYDIDLEHSLTQEDLEKIEK 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAY 157
           +M+E+       +K+ +S ++AR+ FE++ E Y
Sbjct: 124 RMKELAKTKYQVVKKKVSWQEARDAFEARGETY 156


>gi|57641105|ref|YP_183583.1| threonyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
 gi|73919819|sp|Q5JGC8|SYT_PYRKO RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|57159429|dbj|BAD85359.1| Threonyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
          Length = 626

 Score =  120 bits (302), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 112/409 (27%), Positives = 180/409 (44%), Gaps = 35/409 (8%)

Query: 246 HRKLAREMDLFHIAEDGS--GVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQ 302
           H +L  E +L    E GS  G + ++ KG  I   L  Y+  K I+    E+ TP + D 
Sbjct: 208 HVRLMLEQELVDY-EPGSDAGNLRYYPKGRLIKSLLEQYVTEKVIEYGAMEVETPIMYDF 266

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
                  + + + A  + VK  D      + F L+   C G   +      SYR LP+R+
Sbjct: 267 EHPALEKYLNRFPARQYVVKSGD------KKFFLRFAACFGQFLIKKDATISYRNLPLRM 320

Query: 363 AEFGSV-YRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGF 420
            E     +R E SG L GL R+R FT  D H      +Q  +E  K + L + + K  G 
Sbjct: 321 YELTRYSFRREKSGELSGLRRLRAFTMPDMHTVARDLKQAMDEFKKQYKLSMEVLKGVGL 380

Query: 421 --EKIMVKLS-TRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
             E   V +  TR       D + + A+ I K VL  + +    R    +L         
Sbjct: 381 TPEDYEVAIRFTRDFWEQNRDFIVELAKIIGKPVLIEMWDQ---RFFYFIL--------- 428

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           KFE+   D + +     T+Q+D     RF   Y +   ++  P+++H +  G+IER +  
Sbjct: 429 KFEFNFVDNLDKAAALSTVQIDVENAERFGIKYYDEEGKERTPLILHCSPSGAIERVMYA 488

Query: 538 MIEN--------FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE 589
           ++E          K   PLWLSPIQ  V  ++   ++YA  +A  L+   + ++ D   +
Sbjct: 489 ILEKQAKLQEKGIKPMYPLWLSPIQVRVIPVSDEVMDYALYVAGKLEGAKIRVDVDDTGD 548

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
            +N KIR+   + IP II+ G  E  + ++ +RR       ++ L D I
Sbjct: 549 RLNKKIRKAEKEWIPYIIVVGRNEKEQNTVTVRRRSDGRQVEMQLEDLI 597


>gi|296242499|ref|YP_003649986.1| threonyl-tRNA synthetase editing domain-containing protein
           [Thermosphaera aggregans DSM 11486]
 gi|296095083|gb|ADG91034.1| Threonyl-tRNA synthetase editing domain protein [Thermosphaera
           aggregans DSM 11486]
          Length = 613

 Score =  120 bits (302), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 89/339 (26%), Positives = 162/339 (47%), Gaps = 22/339 (6%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
           A +F  +  +  + + R F L+   C    A+    + SY  LP    E    YR E  G
Sbjct: 264 AELFGDRLYEVGLDEDR-FVLRYAACHQQFAMLRDWVISYSHLPFGAFEVADSYRLEQRG 322

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
            +    R+R F   D H+F    +   E +++  ++         EKI+ +      K V
Sbjct: 323 EVALCFRLRKFYMPDLHIF---NKNLEEAVRVSRIVQ--------EKILEEAGKLGRKYV 371

Query: 436 G-SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
              +   D  EN  + +L+ ++  +   +   V+ G   ++    EY + D + R  +  
Sbjct: 372 ALYNVTSDFLENHRQELLEFVRRENYP-VLLAVIPGGIYYWVLNVEYHIIDNLKRPREIA 430

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF---KGN-----L 546
           T Q+D     RFN  +V+   EK HPV+IH A+ G +ER+I ++++     + N     +
Sbjct: 431 TFQIDVGNGRRFNITFVDEKGEKHHPVIIHTAILGGVERYIYMILDTAAIAEANGQTPYI 490

Query: 547 PLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPII 606
           P W+SP+QA +  ++   VE+A +IA  L++    ++ D R+ET+  KIR+   + IP I
Sbjct: 491 PTWISPVQARIIPVSKEYVEHALKIAVELQNQGFRVDVDDRDETLGKKIRDAGREWIPYI 550

Query: 607 IICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           ++ G++E    ++ +R   S   + +SL +   IL +E+
Sbjct: 551 VVVGEREVKTNTLNVRIRRSNDQKAMSLEEFARILREET 589


>gi|297527450|ref|YP_003669474.1| threonyl-tRNA synthetase [Staphylothermus hellenicus DSM 12710]
 gi|297256366|gb|ADI32575.1| threonyl-tRNA synthetase [Staphylothermus hellenicus DSM 12710]
          Length = 614

 Score =  120 bits (301), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 87/325 (26%), Positives = 148/325 (45%), Gaps = 21/325 (6%)

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
           D   F L+   C    A+    + SY+ LP  + E    YR E  G L+   R+R F   
Sbjct: 278 DNEKFVLRYAACHQQFAMLRDWIISYKNLPFGMFEVADSYRLEQRGELNLCFRLRKFYMP 337

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMK 449
           D H+     +  +E +K+  ++         +KI+ +++    K V    +  D     +
Sbjct: 338 DLHIL---NKDLDEAIKMSRIVQ--------DKILEEIAKIGRKYVALYNVTSDFFEKHR 386

Query: 450 GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAF 509
            VL          +   V+     ++    EY + D + R  +  T Q+D     RFN  
Sbjct: 387 DVLIEFVRRENYPVLVSVIPSGIYYWVLNVEYHIIDNLNRPREIATFQIDIGNGKRFNIT 446

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMI--------ENFKGNLPLWLSPIQAIVTTIT 561
           Y +   EK HPV+IH A+ G IERFI  +         E     +P WL+P+Q  +  I 
Sbjct: 447 YTDEKGEKHHPVIIHTAIIGGIERFIYTIFDTAALMEREGKTPYIPTWLAPVQVRIIPIK 506

Query: 562 SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
           +  ++YA+++A  +++    ++ D R E++  KIR+   + IP I++ G++E    +I +
Sbjct: 507 NKYLDYAEKVAEKIENAGFRVDIDDRGESLGKKIRDAGREWIPYIVVIGEREVKSNTINV 566

Query: 622 RRFGSTTTQKVSLLDA-IPILTKES 645
            R   T  QKV + D  I IL +E+
Sbjct: 567 -RIRRTNDQKVMVTDELIRILEEET 590


>gi|38569901|gb|AAR24471.1| predicted threonyl-tRNA synthetase [uncultured crenarchaeote
           DeepAnt-EC39]
          Length = 616

 Score =  120 bits (301), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 94/392 (23%), Positives = 184/392 (46%), Gaps = 36/392 (9%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKDDYE--EINTPQVLDQHLWQQSGHWDSYRANMFA 320
           SG + ++  G  I   +  Y+  KI++ Y   E+ TP + D H      +++ + A  ++
Sbjct: 216 SGNMRFYPNGRLIKSQIEQYVTDKIRN-YGGIEVETPIMYDSHHPSMESYFNRFPARQYS 274

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV-YRNEPSGSLHG 379
           +          +   L+   C G   + +    SY+ LP +L E     +R E SG L G
Sbjct: 275 IDSEG------KHLFLRFAACFGQFLMASDFQLSYKNLPYKLYELTRYSFRREQSGELVG 328

Query: 380 LMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD 438
           L R+R FT  D H FC    Q  +E  K  +L   +    G E+   ++  R      ++
Sbjct: 329 LRRLRAFTMPDCHAFCKDMSQAIDEFRKRFDLSREVLSGLGIEENDYEVGIR-----FTE 383

Query: 439 ALWDDAENIMKGVLDTIKNSSQDRINTGVLL---GEGAFYGP-KFEYILKDAIGRDWQCG 494
             +++ ++++K ++         ++   VL+    E  FY   K+E+   D +G+     
Sbjct: 384 DFYNENKDLIKQLVS--------KVGKPVLIEMWKEKFFYFVLKWEFNFIDNLGKASSLS 435

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNL-------- 546
           T Q+D     R+   + +  +E+ HP+++H +  G++ER I  ++E     +        
Sbjct: 436 TDQIDVENGKRYGITFTDEKNEQQHPIILHNSPSGAVERVIYALLEKSAMQIKDGKIPQF 495

Query: 547 PLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPII 606
           PLWL+PIQ  +  +    +E+A  +A+ L   ++ ++ D RN+TI  +IR+   + I  +
Sbjct: 496 PLWLAPIQVRLIPLKDDFLEFASNLASKLTEQNIRVDIDDRNDTIGKRIRDAEKEWINYV 555

Query: 607 IICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           ++ G+KE +  S+ +R   +   +++S  D +
Sbjct: 556 LVIGEKEMNSSSLSVRDRTTGDVRQLSTEDFV 587


>gi|268323272|emb|CBH36860.1| threonyl-tRNA synthetase [uncultured archaeon]
          Length = 626

 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 102/405 (25%), Positives = 182/405 (44%), Gaps = 35/405 (8%)

Query: 236 YFLEESEKR-------DHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +F+ ESEKR        H +L + +++  +  A D   + F+  KG  I   L  Y+R+ 
Sbjct: 186 FFVYESEKRREVDKIPPHVELMKRLEIADYEPASDPGNMRFYP-KGKLIKGLLEDYVRKS 244

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           + +    E+ TP +          + + + A  +++        DL    L+   C G  
Sbjct: 245 VSEYGAVEVETPIMYSTGHPALKDYLERFPARQYSM-VGKGGKPDL---FLRFSACFGQF 300

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +      SY+ LP+++ E    +R E  G L GL R+R FT  D H  C    +  +E 
Sbjct: 301 LMSKDMSISYKNLPLKIFELAPSFRKEKRGELVGLRRLRKFTMPDMHTLCRDMNEALDEF 360

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            K +   I + +  GF     +++ R  K       + DA    KG ++ +   +   + 
Sbjct: 361 KKQYEFCIQVLEGIGFSTSDYEVAIRFTKE------FYDAN---KGFVEDLVQIAGKPVL 411

Query: 465 TGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIH 524
                    ++  KFE+   DA+G+     T+Q+D     R+   Y++++ EK  P+++H
Sbjct: 412 IECWDQRFFYFVLKFEFNFVDALGKASALSTVQIDVENAERYGITYIDANGEKKRPIILH 471

Query: 525 RAVFGSIERFIGIMIE--------NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLK 576
            +  G+IER I  ++E         F   LPLWLSP Q  +  +    +EY   I   L 
Sbjct: 472 CSPSGAIERCIYALLEKAYLEKEGGFMPMLPLWLSPTQLRILPVAERHLEYIDSILPAL- 530

Query: 577 SHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
            + + ++ D R ET++ KIR+   + IP + + GDKE   +++ +
Sbjct: 531 -NGIRVDVDDREETVSKKIRDAGREWIPYVAVVGDKEVENKTLSV 574


>gi|320101395|ref|YP_004176987.1| threonyl-tRNA synthetase [Desulfurococcus mucosus DSM 2162]
 gi|319753747|gb|ADV65505.1| threonyl-tRNA synthetase [Desulfurococcus mucosus DSM 2162]
          Length = 611

 Score =  119 bits (299), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 91/326 (27%), Positives = 155/326 (47%), Gaps = 33/326 (10%)

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
           F L+   C    A+    + SY+E+P    E    YR E  G L    R+R F   D H+
Sbjct: 279 FVLRYAACHQQFAMLRDWVISYKEMPFGAFEVADSYRLEQRGELALCFRLRKFYMPDLHI 338

Query: 394 FCTKEQMFNECLKIHNLIIS-IYKDFGFEKIMVKLSTRPEKRVGSD--ALWDDAENIMKG 450
                   NE +++   + S I+++ G              +VG    AL++  +  ++ 
Sbjct: 339 LTRD---INEAIEVSMRVQSKIHEEAG--------------KVGRSYVALYNITDEFLEK 381

Query: 451 VLDTIKNSSQDRINTGVLLG---EGAFYGP-KFEYILKDAIGRDWQCGTIQVDFNLPSRF 506
             D +    + R    VLL     G +Y     EY + D + R  +  T Q+D    +RF
Sbjct: 382 YRDKLVEFVK-REKYPVLLAVIPSGIYYWVLNVEYHIVDNLNRPREIATFQIDVGNGARF 440

Query: 507 NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF-----KGN---LPLWLSPIQAIVT 558
           N  YV+   EK HPV+IH A+ G +ER+I ++++       KG    +P W+SP+QA V 
Sbjct: 441 NITYVDEKGEKHHPVIIHTAILGGVERYIYMVLDTAALMEAKGQTPYIPTWMSPVQARVI 500

Query: 559 TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERS 618
            ++    E+A ++A  L S    ++ D R+ET+  KIR+   + +P II+ G++E +  +
Sbjct: 501 PVSREFNEHAFKVAGELASRGFRVDVDDRDETLGKKIRDAGREWVPYIIVIGEREVATGT 560

Query: 619 IGIRRFGSTTTQKVSLLDAIPILTKE 644
           + +R   S   + + L + I +L +E
Sbjct: 561 LNVRVRRSNDQKVMRLEEFIDLLNRE 586


>gi|294496278|ref|YP_003542771.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase
           [Methanohalophilus mahii DSM 5219]
 gi|292667277|gb|ADE37126.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase
           [Methanohalophilus mahii DSM 5219]
          Length = 631

 Score =  119 bits (299), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 112/452 (24%), Positives = 200/452 (44%), Gaps = 49/452 (10%)

Query: 194 VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREM 253
           V +  K    A +YW+  +   +L  + G  +N    L  ++   E S+ R   K+   +
Sbjct: 155 VSEALKAESTARSYWKVLTPDGVLHDVDGFNFNDHANLGTFVDH-EISKSRAVEKVPPHV 213

Query: 254 DLFHIAE-------DGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQVLDQHLW 305
           +L    E         SG + ++ KG  I   L  Y +    ++   E+ TP + D +  
Sbjct: 214 ELMRRLEIADYEPGSDSGNMRYYPKGRLIKSLLERYVLDSSSREGAMEVETPLMYDMNHP 273

Query: 306 QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEF 365
               + D + A  ++++       D R   L+   C G   + +    S+  LP+++ E 
Sbjct: 274 TLKKYLDRFPARQYSIES------DKRHMFLRFAACFGQFLMSHDMTISHHNLPMKMVEL 327

Query: 366 GSV-YRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFE-- 421
               +R E  G L GL R+R FT  D H  C   +Q   +  + + + I + KD G +  
Sbjct: 328 TRYSFRKEQRGELVGLRRLRAFTMPDMHTMCGDMDQAVEQFGRQYQMSIDVLKDVGIDVS 387

Query: 422 --KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY--GP 477
             ++ ++L TR       D +   A+ + K VL              V + E  F+    
Sbjct: 388 DYEVAIRL-TRDFYEENKDFITALAKKVNKPVL--------------VEMWEKRFFYFVL 432

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           KFE+   DA+ +     T+Q+D     R++  Y++   E   PV++H +  G+IER I  
Sbjct: 433 KFEFNFVDALKKASALSTVQIDVENAERYDIKYIDQAGEAKRPVVLHCSPSGAIERCIYS 492

Query: 538 MIE--NFKGN------LPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE 589
           ++E  + K        LP+WLSP Q  V  I    +E+A+E+A+ ++     ++ D R E
Sbjct: 493 LLEKASMKAEGGEVPMLPVWLSPTQVRVIPIAERHMEFAEEVASRIQCR---VDIDDREE 549

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGI 621
           T+  KIR    + +P +++ GD+EA    + +
Sbjct: 550 TVGKKIRNAGQEWVPYVVVVGDREAESGKVNV 581


>gi|44662847|gb|AAS47505.1| threonyl tRNA synthetase [Deinococcus grandis]
          Length = 144

 Score =  119 bits (299), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 58/146 (39%), Positives = 88/146 (60%), Gaps = 9/146 (6%)

Query: 72  VIRHSCAHIMAEAVQSIWP-------EVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           + RHS  H+M+ AV   +         ++  +GP IE+G+Y DFD  +P   ++L +IEK
Sbjct: 1   IFRHSLGHVMSRAVGEYYKGKGYGADAIKRGVGPSIENGWYQDFDLPEPLKEEDLPEIEK 60

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
            M++II R   F ++ +S  KA  L +   + YK E++  +P  E +T Y QG++ DLCR
Sbjct: 61  IMRDIITRGLDFTRREIS--KAEGLAQFPHDPYKQELIAGLPEDEPITFYTQGDYTDLCR 118

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRG 210
           GPH  +TG++   FKLM  +GAYWRG
Sbjct: 119 GPHFPNTGKLPGAFKLMSTSGAYWRG 144


>gi|14521542|ref|NP_127018.1| threonyl-tRNA synthetase [Pyrococcus abyssi GE5]
 gi|14548274|sp|Q9UZ14|SYT_PYRAB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|5458761|emb|CAB50248.1| thrS threonyl-tRNA synthetase [Pyrococcus abyssi GE5]
          Length = 625

 Score =  119 bits (299), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 101/391 (25%), Positives = 173/391 (44%), Gaps = 29/391 (7%)

Query: 246 HRKLAREMDLFHIAEDGS--GVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQ 302
           H KL  E +L    E GS  G + ++ KG  I   L  Y+  K I+    E+ TP + D 
Sbjct: 207 HVKLMLEHELVDY-EPGSDPGNLRYYPKGRLIKSLLEQYVTEKVIEYGAMEVETPIMYDF 265

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
                  + + + A  + V   D      + + L+   C G   +    + SYR LP+R+
Sbjct: 266 EHPALEKYLNRFPARQYIVLSGD------KRYFLRFAACFGQFMIKKDAIISYRNLPLRM 319

Query: 363 AEFGSV-YRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGF 420
            E     +R E  G L GL R+R FT  D H      EQ   E  K   L + + +  G 
Sbjct: 320 YELTRYSFRREKRGELSGLRRLRAFTMPDMHTLAKDIEQAKEEFKKQFKLSMEVLEGVGL 379

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
                +++ R      ++  W + ++ +  ++  I       +   +      ++  KFE
Sbjct: 380 TPEDYEVAIR-----FTEDFWKEHKDFIVELVKLIGKP----VLIEMWKQRFFYFILKFE 430

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI----- 535
           +   D + +     T+Q+D     RF   Y + + E+ +P+++H +  G+IER +     
Sbjct: 431 FNFVDNLDKAAALSTVQIDVENAERFGITYYDENGEEKYPLILHCSPSGAIERVMYAILE 490

Query: 536 ---GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
               +M E  K   PLWLSPIQ  V  ++   ++YA  +A  L+   + ++ D  +E +N
Sbjct: 491 KQAKLMNEGKKPMFPLWLSPIQVRVIPVSEEYLDYALYVAGKLEGAKIRVDVDDEDERLN 550

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRR 623
            KIR    + IP I++ G +E    +I +RR
Sbjct: 551 KKIRRAEKEWIPYIVVVGAREKENGTITVRR 581


>gi|213028506|ref|ZP_03342953.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 148

 Score =  119 bits (299), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 53/145 (36%), Positives = 94/145 (64%), Gaps = 1/145 (0%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D SD +  + ++ IIT +
Sbjct: 4   ITLPDGSQRHYDHPVSPMDVALDIGPGLAKATIAGRVNGELVDASDLIENDATLSIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ +WP  ++AIGP++++GFYYD D ++  + +++  +EK+
Sbjct: 64  DEEGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVVDNGFYYDVDLDRTLTQEDVEALEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELF 150
           M E+  ++   +K+ +S  +ARE F
Sbjct: 124 MHELAEKNYDVIKKKVSWHEARETF 148


>gi|118575454|ref|YP_875197.1| threonyl-tRNA synthetase [Cenarchaeum symbiosum A]
 gi|166223332|sp|A0RU76|SYT_CENSY RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|118193975|gb|ABK76893.1| threonyl-tRNA synthetase [Cenarchaeum symbiosum A]
          Length = 615

 Score =  119 bits (298), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 89/363 (24%), Positives = 163/363 (44%), Gaps = 25/363 (6%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+ TP + D +      +++ + A  +++        + ++  L+   C G   +     
Sbjct: 246 EVETPIMYDSNHPSMVSYFNRFPARQYSIDS------EGKSLFLRFAACFGQFLMAGDYQ 299

Query: 353 KSYRELPVRLAEFGSV-YRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNL 410
            SY+ LP RL E     +R E SG L GL R+R FT  D H FCT   Q   E      L
Sbjct: 300 LSYKNLPFRLYELTRYSFRREQSGELVGLRRLRAFTMPDCHAFCTDMAQAVREAGVRFEL 359

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
              +    G +    +++ R  +   ++      E + +     +    ++R    VL  
Sbjct: 360 SRDVIGQLGLDAADYEMAIRLTEEFYAENGGAVREMVRRHGRPVLVEMWKERFFYFVL-- 417

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
                  K+E+   D  G+     T Q+D     R+   +V+ ++ + HPV++H +  G+
Sbjct: 418 -------KWEFNYIDGAGKASALSTDQIDVENGKRYGIEFVDENNGRQHPVILHNSPSGA 470

Query: 531 IERFIGIMIE--------NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSI 582
           IER I  ++E          K  LPLWLSP+QA +  +    V  A E+A  +  H +  
Sbjct: 471 IERVIYTLLEKAAADSARGTKPELPLWLSPVQARIIPVGEELVRNATELAKEMAGHGIRA 530

Query: 583 ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           + D RNE++  +IRE   + +  I++ G+KEA+   + +R   +  + ++ L D +  + 
Sbjct: 531 DVDDRNESMGKRIREAEKEWVRYILVVGEKEAASGRLSVRDRRTGKSTEMGLDDLVEAVR 590

Query: 643 KES 645
           +++
Sbjct: 591 EQT 593


>gi|291235359|ref|XP_002737612.1| PREDICTED: AGAP008929-PA-like, partial [Saccoglossus kowalevskii]
          Length = 314

 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 54/142 (38%), Positives = 86/142 (60%), Gaps = 7/142 (4%)

Query: 204 AGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGS 263
           +  YW G ++   L RIYG ++   ++L ++ +F EE+ KRDHRK+ R+ +L+   E   
Sbjct: 2   SATYWEGKADAESLQRIYGISFPDTKQLKEWKHFQEEAAKRDHRKIGRDQELYFFHELSP 61

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK 322
           G  F+H KG  I+ TLI+Y++ + +   ++E+ +P + +  LW+ SGHW  Y  NMF+ +
Sbjct: 62  GSCFFHPKGAHIYNTLINYIKSEYRTRGFQEVVSPNIYNSKLWETSGHWQHYAENMFSFE 121

Query: 323 CADDTIKDLRTFALKPMNCPGH 344
                  +   FALKPMNCPGH
Sbjct: 122 ------SEKEKFALKPMNCPGH 137


>gi|161528434|ref|YP_001582260.1| threonyl-tRNA synthetase [Nitrosopumilus maritimus SCM1]
 gi|238686913|sp|A9A2B1|SYT_NITMS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|160339735|gb|ABX12822.1| threonyl-tRNA synthetase [Nitrosopumilus maritimus SCM1]
          Length = 621

 Score =  118 bits (296), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 85/354 (24%), Positives = 159/354 (44%), Gaps = 25/354 (7%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+ TP + D        +++ + A  + +        + +   L+   C G   + N   
Sbjct: 252 EVETPIMYDSEHPSMVSYFNRFPARQYNIDS------EGKKLFLRFAACFGQFLMANQFQ 305

Query: 353 KSYRELPVRLAEFGSV-YRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNL 410
            SY+ LP +L E     +R E SG L GL R+R FT  D H FC    Q  +E     +L
Sbjct: 306 MSYKNLPYKLYELTRYSFRREQSGELVGLRRLRAFTMPDCHAFCKDIPQAVDEIKVRFDL 365

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
             S+ K+ G ++    ++ R           +D  N  K  ++ +       +   +   
Sbjct: 366 SQSVLKELGIDESDYDMAIR---------FTEDFYNENKSAIEELVKKHGRPVLVEMWKE 416

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           +  ++  K+E+   D +G+     T Q+D     R+   +V+ ++   HP+++H +  G+
Sbjct: 417 KFFYFVLKWEFNFIDNLGKASALSTDQIDVENGDRYGIEFVDENNTAQHPIILHNSPSGA 476

Query: 531 IERFIGIMIENF--------KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSI 582
           IER I  ++E          K  LPLWL+P Q  +  +     ++   + + + + ++ +
Sbjct: 477 IERIIYALLEKAADDSKKGKKPQLPLWLAPTQVRIIPLKEEFYDFCNNLCDKISAQNVRV 536

Query: 583 ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
           + D RNE+I  +IRE   + I  I++ G+KEA   ++ IR   +   ++VS  D
Sbjct: 537 DVDDRNESIGKRIREAEKEWIQYILVIGEKEAGSENLSIRDRQTGNVREVSFDD 590


>gi|254167669|ref|ZP_04874520.1| threonyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|289596979|ref|YP_003483675.1| threonyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|197623478|gb|EDY36042.1| threonyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|289534766|gb|ADD09113.1| threonyl-tRNA synthetase [Aciduliprofundum boonei T469]
          Length = 612

 Score =  118 bits (295), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 102/412 (24%), Positives = 187/412 (45%), Gaps = 40/412 (9%)

Query: 246 HRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLIS-YMRRKIKD-DYEEINTPQVLD 301
           H KL R ++L  +    D SG + ++ KG K+ + LI  Y+  K+ D    ++ TP + D
Sbjct: 196 HVKLMRSLELADYEPGSD-SGNMRYYPKG-KLIKALIEDYVENKVIDYGAMQVETPIMYD 253

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
            +      + + + A  + V    D       + L+   C G   + +    SYR LP+R
Sbjct: 254 FNHPSLKSYLNRFPARQYIVLSGKDK------YFLRFAACFGQFLMMHDATISYRNLPLR 307

Query: 362 LAEFGS-VYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFG 419
           L E     +R E  G L GL R+R FT  D H       Q   E  + + + I + KDFG
Sbjct: 308 LYEMAKYAFRREQKGELSGLRRLRAFTMPDMHTLAADMPQAMEEFKRQYEMAIEVLKDFG 367

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL---GEGAFYG 476
            E    +++ R      +   +++ ++ ++ ++  +        N  VL+    E  FY 
Sbjct: 368 LELGDYEVAIR-----FTRDFYEENKDFIRELVKLV--------NRPVLIQMWDERFFYF 414

Query: 477 P-KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
             KFE+   D++ +     T+Q+D     R+   Y + +  + +P ++H +  G++ER +
Sbjct: 415 VLKFEFNFVDSLNKAAALSTVQIDVENAERYGITYYDENGNERYPYILHCSPSGAVERIL 474

Query: 536 GIMIENF--------KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR 587
             M+E          K  LP+WLSP Q  +  +    +  + +  +  +S    ++ D R
Sbjct: 475 YAMLEKADMDAKMGKKPKLPVWLSPTQVRIIPVKDDFIGCSIQEMDYFRSEEFRVDIDDR 534

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIR-RFGSTTTQKVSLLDAI 638
           + +++ KIR+   + IP I++ G+KE  +  + +R R G     K   L A+
Sbjct: 535 DLSVSRKIRDAEKEWIPYIVVIGEKEKEKDILTVRIRGGGVKEMKREELLAL 586


>gi|20091717|ref|NP_617792.1| threonyl-tRNA synthetase [Methanosarcina acetivorans C2A]
 gi|22654112|sp|Q8TLX7|SYT_METAC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|19916894|gb|AAM06272.1| threonyl-tRNA synthetase [Methanosarcina acetivorans C2A]
          Length = 635

 Score =  118 bits (295), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 114/471 (24%), Positives = 213/471 (45%), Gaps = 51/471 (10%)

Query: 194 VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR------DHR 247
           V +  K    A +YWR  +    L  +         +L Q++ + E S+ R       H 
Sbjct: 159 VSEALKAEGTARSYWRILTPDGELHEVETFDLTPYPKLQQFVNY-EISKSRAVERAPPHV 217

Query: 248 KLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDY--EEINTPQVLDQH 303
           +L R ++L  +    D SG + ++ KG ++ ++L+      +  ++   E+ TP + D +
Sbjct: 218 ELMRRLELADYEPGSD-SGNMRYYPKG-RLVKSLLENYVLDVATEFGAMEVETPLMYDMN 275

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRL 362
                 + D + A  ++++       D R   L+   C G   + NH +  SY+ LP+R+
Sbjct: 276 HPTLKKYLDRFPARQYSIES------DKRQMFLRFAACFGQF-LMNHDMTISYKNLPLRM 328

Query: 363 AEFGSV-YRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGF 420
            E     +R E  G L GL R+R FT  D H  C    Q  ++  + ++L I + ++ G 
Sbjct: 329 IEMTRYSFRKEQRGELVGLRRLRAFTMPDMHTLCEDMNQAVSQFKEQYDLCIDVLENVGI 388

Query: 421 E----KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
                ++ ++  TR       + + + A+ + K VL  + ++   R    VL        
Sbjct: 389 HIDDYEVAIRF-TRDFYESNKELVVNMAKTVNKPVLVEMWDT---RFFYFVL-------- 436

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
            KFE+   DA+ +     T+Q+D     R++  YVN+  +   P+++H +  G+IER I 
Sbjct: 437 -KFEFNFVDALAKASALSTVQIDVENAERYDISYVNADGKLERPIVLHCSPSGAIERCIY 495

Query: 537 IMIENFKGN--------LPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRN 588
            ++E             LP+WLSP Q  +  I+   + +A+E++  L      ++ D R+
Sbjct: 496 ALLEKAAMETEEGKVPMLPVWLSPTQVRIVPISEKHLAFAEEVSKKLDCR---VDIDDRD 552

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
            +I  K+RE   + +P +++ GDKE  E +I +     +   K S +   P
Sbjct: 553 LSIGKKVREAGREWVPYVVVIGDKEMEEGTINVTVRAESEQNKPSKVQITP 603


>gi|330685707|gb|EGG97346.1| TGS domain protein [Staphylococcus epidermidis VCU121]
          Length = 121

 Score =  118 bits (295), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 55/111 (49%), Positives = 77/111 (69%), Gaps = 1/111 (0%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           I + FPDG+ K F    T  D+A+SIS  L KKAVA   NG++ DL+ P+ E G IEI+T
Sbjct: 4   INIQFPDGNSKAFDKGTTTEDIAQSISPGLRKKAVAGKFNGQMVDLTRPLEEDGEIEIVT 63

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPF 114
           P    +L V+RHS AH+MA+A++ ++ +V+  +GP+IE GFYYDFD E+ F
Sbjct: 64  PGSDEALEVLRHSTAHLMAQALKRLYGDVKFGVGPVIEGGFYYDFDTEEKF 114


>gi|18977723|ref|NP_579080.1| threonyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
 gi|22654114|sp|Q8U176|SYT_PYRFU RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|18893458|gb|AAL81475.1| threonyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
          Length = 625

 Score =  117 bits (294), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 104/395 (26%), Positives = 178/395 (45%), Gaps = 37/395 (9%)

Query: 246 HRKLAREMDLFHIAEDGS--GVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQ 302
           H +L  E +L    E GS  G + ++ KG  I   L  Y+  K I+    E+ TP + D 
Sbjct: 207 HVRLMLEHELVDY-EPGSDPGNLRYYPKGRLIKSLLEQYVSEKVIEYGAMEVETPIMYDF 265

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
                  + + + A  + V   D      + + L+   C G   +      SYR LP+R+
Sbjct: 266 EHPALEKYLNRFPARQYIVLSGD------KRYFLRFAACFGQFMISKDATISYRNLPLRM 319

Query: 363 AEFGSV-YRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGF 420
            E     +R E  G L GL R+R FT  D H      EQ  +E  K   L + +    G 
Sbjct: 320 YELTRYSFRREKRGELSGLRRLRAFTMPDMHTLAKDIEQAKDEFKKQFKLSMEVLGGVGL 379

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL---GEGAFYG- 476
                +++ R      ++  W++ ++    +++ +K      I   VL+    +  FY  
Sbjct: 380 TPDDYEVAIR-----FTEDFWNEHKDF---IIELVK-----LIGKPVLIEMWKQRFFYFI 426

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI- 535
            KFE+   D + +     T+Q+D     RF   Y + + E+ +P+++H +  G+IER + 
Sbjct: 427 LKFEFNFVDNLDKAAALSTVQIDVENAERFGITYYDENGEEKYPLILHCSPSGAIERVMY 486

Query: 536 -------GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRN 588
                   +M E  K   PLWLSPIQ  V  ++   ++YA  +A  ++   + ++ D  +
Sbjct: 487 AILEKQAKLMQEGKKPMFPLWLSPIQVRVIPVSKEYLDYALYVAGKIEGARIRVDVDDED 546

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRR 623
           E ++ KIR    + IP I++ G+KE    +I +RR
Sbjct: 547 ERLSKKIRRAEKEWIPYIVVVGEKEKETGTITVRR 581


>gi|254167083|ref|ZP_04873936.1| threonyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|197623939|gb|EDY36501.1| threonyl-tRNA synthetase [Aciduliprofundum boonei T469]
          Length = 612

 Score =  117 bits (294), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 102/412 (24%), Positives = 187/412 (45%), Gaps = 40/412 (9%)

Query: 246 HRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLIS-YMRRKIKD-DYEEINTPQVLD 301
           H KL R ++L  +    D SG + ++ KG K+ + LI  Y+  K+ D    ++ TP + D
Sbjct: 196 HVKLMRSLELADYEPGSD-SGNMRYYPKG-KLIKALIEDYVENKVIDYGAMQVETPIMYD 253

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
            +      + + + A  + V    D       + L+   C G   + +    SYR LP+R
Sbjct: 254 FNHPSLKSYLNRFPARQYIVLSGKDK------YFLRFAACFGQFLMMHDATISYRNLPLR 307

Query: 362 LAEFGS-VYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFG 419
           L E     +R E  G L GL R+R FT  D H       Q   E  + + + I + KDFG
Sbjct: 308 LYEMAKYAFRREQKGELSGLRRLRAFTMPDMHTLAADMPQAMEEFKRQYEMAIKVLKDFG 367

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL---GEGAFYG 476
            E    +++ R      +   +++ ++ ++ ++  +        N  VL+    E  FY 
Sbjct: 368 LELGDYEVAIR-----FTRDFYEENKDFIRELVKLV--------NRPVLIQMWDERFFYF 414

Query: 477 P-KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
             KFE+   D++ +     T+Q+D     R+   Y + +  + +P ++H +  G++ER +
Sbjct: 415 VLKFEFNFVDSLNKAAALSTVQIDVENAERYGITYYDENGNEKYPYILHCSPSGAVERIL 474

Query: 536 GIMIENF--------KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR 587
             M+E          K  LP+WLSP Q  +  +    +  + +  +  +S    ++ D R
Sbjct: 475 YAMLEKADMDAKKGKKPKLPVWLSPTQVRIIPVKDDFIGCSIQEMDYFRSEGFRVDIDDR 534

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIR-RFGSTTTQKVSLLDAI 638
           + +++ KIR+   + IP I++ G+KE  +  + +R R G     K   L A+
Sbjct: 535 DLSVSRKIRDAEKEWIPYIVVIGEKEKEKDILTVRIRGGGVKEMKREELLAL 586


>gi|332158991|ref|YP_004424270.1| threonyl-tRNA synthetase [Pyrococcus sp. NA2]
 gi|331034454|gb|AEC52266.1| threonyl-tRNA synthetase [Pyrococcus sp. NA2]
          Length = 625

 Score =  117 bits (293), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 105/395 (26%), Positives = 178/395 (45%), Gaps = 37/395 (9%)

Query: 246 HRKLAREMDLFHIAEDGS--GVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQ 302
           H KL  E +L    E GS  G + ++ KG  I   L  Y+  K I+    E+ TP + D 
Sbjct: 207 HVKLMLEHELVDY-EPGSDPGNLRYYPKGRLIKSLLEQYVTEKVIEYGAMEVETPVMYDF 265

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
                  + + + A  + V   D      + + L+   C G   +    + SY+ LP+R+
Sbjct: 266 EHPALEKYLNRFPARQYIVLSGD------KRYFLRFAACFGQFLISKDAVISYKHLPLRM 319

Query: 363 AEFGSV-YRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGF 420
            E     +R E  G L GL R+R FT  D H      EQ   E  K   L + + +  G 
Sbjct: 320 YELTRYSFRREKRGELSGLRRLRAFTMPDMHTLAKDLEQAKEEFKKQFKLSMEVLEGVGL 379

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL---GEGAFYG- 476
                +++ R      ++  W +  +    +++ +K      I   VL+    +  FY  
Sbjct: 380 TPDDYEVAIR-----FTEDFWKENRDF---IIELVK-----LIGKPVLIEMWKQRFFYFI 426

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI- 535
            KFE+   D + +     T+Q+D     RF   Y + + E+ +P+++H +  G+IER + 
Sbjct: 427 LKFEFNFVDNLDKAAALSTVQIDVENAERFGIKYYDENGEERYPLILHCSPSGAIERVMY 486

Query: 536 -------GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRN 588
                   +M +  K  LP+WLSPIQ  V  +++  ++YA  +A  L+   + ++ D  +
Sbjct: 487 AILEKQAKLMQQGKKPMLPVWLSPIQVRVIPVSNDFLDYALYVAGKLEGAKIRVDVDDED 546

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRR 623
           E +N KIR    + IP I++ G KE    +I +RR
Sbjct: 547 ERLNKKIRRAEKEWIPYIVVVGAKEKETGTIMVRR 581


>gi|65319683|ref|ZP_00392642.1| COG0441: Threonyl-tRNA synthetase [Bacillus anthracis str. A2012]
          Length = 154

 Score =  117 bits (292), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 59/148 (39%), Positives = 97/148 (65%), Gaps = 1/148 (0%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N ++ DL   + E + +EIIT
Sbjct: 6   IEIKFPDGSVKEFVXGITLEEIAGSISSSLKKKAVAGNVNDELYDLRRNIEENAEVEIIT 65

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +    + + RHS AHI+A+AV+ ++ ++ + +GP+IE+GFYYD D     + ++L +IE
Sbjct: 66  IDSNEGVEIARHSAAHILAQAVKRLYGDINLGVGPVIENGFYYDMDLPSSVNVEDLRKIE 125

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFE 151
           K+M++II  +    +  +S E+A +LF+
Sbjct: 126 KEMKKIINENIKVERVEVSREEAAKLFQ 153


>gi|329765249|ref|ZP_08256829.1| threonyl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
 gi|329138155|gb|EGG42411.1| threonyl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
          Length = 624

 Score =  116 bits (291), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 105/437 (24%), Positives = 195/437 (44%), Gaps = 38/437 (8%)

Query: 206 AYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR------DHRKLAREMDL--FH 257
           +YW+  S    LS I G    T+    + L   E ++KR       H  L ++M +  + 
Sbjct: 161 SYWKILSPDGTLSNI-GDFDFTKYPKLEILAKYESAKKRAVDEPPPHVALMKKMGIADYE 219

Query: 258 IAEDGSGVIFWHRKGWKIFQTLIS-YMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
            A D   + F+     ++ ++LI  Y+  ++K+    E+ TP + D H      +++ + 
Sbjct: 220 PASDSGNMRFF--PNGRLIKSLIERYVTDRVKEYGGYEVETPIMYDSHHPSMVSYFNRFP 277

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV-YRNEPS 374
           A  + +        + +   L+   C G   + N    SY+ LP +L E     +R E S
Sbjct: 278 ARQYNIDS------EGKKLFLRFAACFGQFLMANEYQLSYKNLPYKLYELTRYSFRREQS 331

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
           G L GL R+R FT  D H FC   EQ   E     +L  ++ K+ G      +++ R   
Sbjct: 332 GELVGLRRLRAFTMPDCHAFCKDIEQSIKEIKVRFDLSRNVLKELGIVDSDYEMAIR--- 388

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
                   +D  N  K  ++ +       +   +   +  ++  K+E+   D++G+    
Sbjct: 389 ------FTEDFYNENKSSIEELVKKHGRPVLVEMWKEKFFYFVLKWEFNFVDSMGKASAL 442

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF--------KGN 545
            T Q+D    +R+   +V+ H+ + HP+++H +  G+IER + +++E          K  
Sbjct: 443 STDQIDVENGNRYGIEFVDEHNVRKHPIILHNSPSGAIERIVYVLLEKAAQDIKEGRKPQ 502

Query: 546 LPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPI 605
            PLWL+P Q  V  +          + + L S ++ ++ D RNE+I  +IR+     I  
Sbjct: 503 FPLWLAPTQVRVIPLKEEFSSICDTLVDKLSSFNIRVDIDDRNESIGKRIRDAEKDWIRY 562

Query: 606 IIICGDKEASERSIGIR 622
            ++ G+KEA+  ++ IR
Sbjct: 563 TLVIGEKEANSENLSIR 579


>gi|315230254|ref|YP_004070690.1| threonyl-tRNA synthetase [Thermococcus barophilus MP]
 gi|315183282|gb|ADT83467.1| threonyl-tRNA synthetase [Thermococcus barophilus MP]
          Length = 625

 Score =  115 bits (289), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 107/410 (26%), Positives = 182/410 (44%), Gaps = 37/410 (9%)

Query: 246 HRKLAREMDLFHIAEDGS--GVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQ 302
           H K+  E +L    E GS  G + ++ KG  I   L  Y+  K I+    E+ TP + D 
Sbjct: 207 HVKIMLEQELVDY-EPGSDPGNLRYYPKGRLIKSLLEQYVTEKVIEYGAMEVETPIMYDF 265

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
                  + + + A  + VK  D      + + L+   C G   +      SY+ LP+R+
Sbjct: 266 EHPALEKYLNRFPARQYIVKSGD------KKYFLRFAACFGQFLIKKDATISYKHLPLRM 319

Query: 363 AEFGSV-YRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGF 420
            E     +R E  G L GL R+R FT  D H      +Q   E  K + L + + K  G 
Sbjct: 320 YELTRYSFRREKRGELSGLRRLRAFTMPDMHTVAKDLKQAMEEFKKQYKLSMEVLKGVGL 379

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL---GEGAFYG- 476
                +++ R      ++  W++ ++    V++ +K      I   VL+    +  FY  
Sbjct: 380 TPDDYEVAIR-----FTEDFWNENKDF---VVELVKI-----IGKPVLIEMWKQRFFYFI 426

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
            KFE+   D + +     T+Q+D     RF   Y +   ++ HP+++H +  G+IER + 
Sbjct: 427 LKFEFNFVDNLDKAAALSTVQIDVENAERFGITYYDEDGKEKHPLILHCSPSGAIERVMY 486

Query: 537 IMIEN--------FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRN 588
            ++E          K   PLWLSPIQ  V  +    ++YA  IA  L+   + ++ D  +
Sbjct: 487 AILEKQAKLRNQGKKPMYPLWLSPIQVRVIPVNEDYLDYALYIAGKLEGARIRVDVDDTS 546

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           + +  KIR+   + IP II+ G+ E  +  I +R+       ++ L D I
Sbjct: 547 DRLTKKIRKAEKEWIPYIIVVGENEKRQGIITVRKREDGKQYEMQLEDLI 596


>gi|325957845|ref|YP_004289311.1| threonyl-tRNA synthetase [Methanobacterium sp. AL-21]
 gi|325329277|gb|ADZ08339.1| threonyl-tRNA synthetase [Methanobacterium sp. AL-21]
          Length = 614

 Score =  115 bits (287), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 109/417 (26%), Positives = 178/417 (42%), Gaps = 53/417 (12%)

Query: 221 YGTAWNTQQELTQYLYFLEES--EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQ 277
           Y    N  ++L  Y     ES  E+  H K+ RE  L         G + W+ KG  I  
Sbjct: 175 YNFENNDLKKLVDYELGRGESTGEEPPHVKIMREKHLADYEPSADVGHLRWYPKGRLIRD 234

Query: 278 TLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFAL 336
            L  Y+   + +     + TP + D        H + +    + +   +      +   L
Sbjct: 235 LLADYVYNLVTERGAMPVETPIMYDLADDAIRVHAEKFGERQYRMGTKN------KELML 288

Query: 337 KPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV-YRNEPSGSLHGLMRVRGFTQDDAHVFC 395
           +   C G   V +    +++ LPV + E  +  +R E  G + GL R+RGFT  D H  C
Sbjct: 289 RYACCFGAFRVLSDSFLTWKNLPVGIYELSTYSFRLEKKGEVVGLKRLRGFTMPDLHTVC 348

Query: 396 TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE--KRVGSDALWDDAENIMKGVLD 453
                                    +  MV+   + +  K+ G D L  + E IM+   D
Sbjct: 349 AD----------------------VDHAMVEFDGQIDMCKQTGID-LEVNYEVIMRATKD 385

Query: 454 TIKN------SSQDRINTGVLLG----EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLP 503
             +       SS D+I   VLL        ++  K ++   D +GR  +  TIQ+D    
Sbjct: 386 FFEENKEWVFSSADKIGKPVLLEILPERKHYWIAKMDFAAIDYLGRPIENPTIQIDVESG 445

Query: 504 SRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE------NFKGN-LPLWLSPIQAI 556
            RF   Y++    + HP++IH +  GSIER I  ++E      NF+   LP+WL+P Q  
Sbjct: 446 ERFGITYIDPDENEVHPIIIHCSPTGSIERVICSLLEKSAIERNFRPPMLPIWLTPSQVR 505

Query: 557 VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
           V  I     +YAQ+I   ++  ++ ++ D R+ET+  KIR  +   +P +I+ GD+E
Sbjct: 506 VIPIAERHNDYAQDIVQKIRDQNVRVDLDERHETVGKKIRNAAGDWVPYVIVIGDRE 562


>gi|154150426|ref|YP_001404044.1| threonyl-tRNA synthetase [Candidatus Methanoregula boonei 6A8]
 gi|166223354|sp|A7I6P0|SYT_METB6 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|153998978|gb|ABS55401.1| threonyl-tRNA synthetase [Methanoregula boonei 6A8]
          Length = 614

 Score =  115 bits (287), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 100/388 (25%), Positives = 167/388 (43%), Gaps = 28/388 (7%)

Query: 246 HRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQVLDQ 302
           H  L R  +L  +  A D  G + W  KG  I   +  Y +   +      + TP + D 
Sbjct: 199 HVDLMRSKELVDYEPASD-VGCMRWMPKGKLIRDLMADYVLALLLPYGATPVETPVMYDL 257

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
                  H D +    +  K  +      R   L+   C G  ++      S   LP+++
Sbjct: 258 GDKAIYEHADKFGERQYRFKSNN------RDMMLRFAACFGMFSIMRDMHISKNTLPMKM 311

Query: 363 AEFGSV-YRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
            E  +  +R+E  G + GL R+R FT  D H  CT      +C +   L I       FE
Sbjct: 312 YELSTYSFRHEQKGEVIGLKRLRCFTMPDMHSLCTDMPEAMKCFE-EQLAIGWQTGRDFE 370

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
             +V  + R  K+      +D+ E  +K ++      S   +   +L     ++  K + 
Sbjct: 371 TKLVA-AFRCTKK-----FYDENEAWVKKIV----KESDCPMLIEILSERVHYWEAKIDL 420

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
              D   R  +  T+Q+D    +RFN  Y        +P ++H +  GS+ER I  ++EN
Sbjct: 421 AAIDGQNRPIENPTVQIDVESSTRFNIKYFKDDGTPVYPPILHCSPTGSVERVICAILEN 480

Query: 542 FKGN----LPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
                   LP WLSP+QA V  +      YAQEI + L +  +  + D R+E++  K+RE
Sbjct: 481 ISTQKVPALPTWLSPVQARVVPVAERHTAYAQEICDALNAQGIRCDLDERDESVGKKVRE 540

Query: 598 HSIKKIPIIIICGDKEASER--SIGIRR 623
             +  +P +I+ GD+E + +  ++ IRR
Sbjct: 541 AGMDWVPYVIVIGDEEMASKKLTVTIRR 568


>gi|304313817|ref|YP_003848964.1| threonyl-tRNA synthetase [Methanothermobacter marburgensis str.
           Marburg]
 gi|302587276|gb|ADL57651.1| threonyl-tRNA synthetase [Methanothermobacter marburgensis str.
           Marburg]
          Length = 605

 Score =  114 bits (286), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 97/396 (24%), Positives = 171/396 (43%), Gaps = 31/396 (7%)

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQV 299
           E+  H +L RE  L         G + W+ +G  I   L  Y+   +  +    + TP +
Sbjct: 191 EEPPHVRLMREKGLADYEPSADVGHLRWYPRGRLIRDLLADYVYMLVTSEGAMPVETPIM 250

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            D        H + +    +        +K+ +   L+   C G   + +    +++ LP
Sbjct: 251 YDLEDEAIRVHAEKFGERQY-------RMKNKKELMLRYACCFGAFRILSDSFLTWKNLP 303

Query: 360 VRLAEFGSV-YRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKD 417
             + E  +  +R E  G + GL R+RGFT  D H  C   EQ   E      + +   +D
Sbjct: 304 ASIYELSTYSFRLEKKGEVVGLKRLRGFTMPDLHTVCADLEQALTEFAGQVEMCMKTGED 363

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
                 ++  +TR      SD +   A+ I K +L  +  S +             ++  
Sbjct: 364 LQVNYEVIFRATREFYEEYSDWVHSVADRIGKPILLELLPSRKH------------YWIA 411

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K ++   D +GR  +  T+Q+D     RF   YVNS  E+ +P+++H +  GSIER I  
Sbjct: 412 KMDFAAIDYLGRPIENPTVQIDVESGERFGITYVNSDEEEVNPIILHCSPTGSIERVICS 471

Query: 538 MIENFK-------GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
           ++E            LP+WLSP Q  V  I    +E+A+ + + + ++ +  + D R ET
Sbjct: 472 LLEKTAIEMDEKPPMLPVWLSPTQVRVLPIAERHLEFAESLVSEMTANDVRADLDDRAET 531

Query: 591 INYKIREHSIKKIPIIIICGDKEASER-SIGIRRFG 625
           +  KIR  +   +P +++ GD E   + ++ IR  G
Sbjct: 532 LGKKIRNAAQDWVPYVVVVGDSELEGKLTVNIRSTG 567


>gi|147920005|ref|YP_686240.1| threonyl-tRNA synthetase [uncultured methanogenic archaeon RC-I]
 gi|121683020|sp|Q0W3X9|SYT_UNCMA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|110621636|emb|CAJ36914.1| threonyl-tRNA synthetase [uncultured methanogenic archaeon RC-I]
          Length = 641

 Score =  114 bits (285), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 110/401 (27%), Positives = 183/401 (45%), Gaps = 54/401 (13%)

Query: 246 HRKLAREMDLFHIAEDGS--GVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQVLDQ 302
           H +L R ++L    E GS  G + W+ KG  +   L  + +    K    E+ TP + D 
Sbjct: 217 HVELMRRLELADY-EPGSDPGNMRWYPKGRAMKNMLEQFVLSEAAKKGAMEVETPIMYDM 275

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVR 361
                  + D + A  + V      I D +   L+   C G   + NH +  SYR LP++
Sbjct: 276 EHPTLKKYLDRFPARQYTV------IADKKNLFLRFAACFGQF-LMNHDMTISYRNLPLK 328

Query: 362 LAEFGSV-YRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG- 419
           + E     +R E  G L GL R+R FT  D H  CT              +    K+FG 
Sbjct: 329 MIELTRYSFRKEQRGELVGLRRLRAFTMPDMHTLCTD-------------MDGAIKEFGD 375

Query: 420 -FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQ------DRINTGVLLG-- 470
            +E  +  L T     +G D +  D E  ++   D   N++        R    V++   
Sbjct: 376 QYEMCINTLDT-----IGID-IKTDYEVAIRFTKDFYNNNTPFIQSLVKRAGKPVIVEMW 429

Query: 471 -EGAFYGP-KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
            E  FY   KFE+   D++ +     T+Q+D     R++  YV+ +  +  P+++H +  
Sbjct: 430 EERFFYFVLKFEFNYIDSLNKASALSTVQIDVENAERYDINYVDQNGNRQRPIILHCSPS 489

Query: 529 GSIERFI-GIM----IENFKGN---LPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHL 580
           G+IER I G++    +E+ KG    LP+WLSP Q  + TI+   V +A+ +A+  +  ++
Sbjct: 490 GAIERCIYGLLEKEAMESEKGAVPMLPVWLSPTQVRIVTISEKHVPFAEALAD--RMCNV 547

Query: 581 SIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
            ++ D R ET+  KIR+   + IP ++  GD E +   I +
Sbjct: 548 RVDIDDREETVGKKIRDAGKEWIPYVVTIGDAEMNGDKIPV 588


>gi|148643274|ref|YP_001273787.1| threonyl-tRNA synthetase [Methanobrevibacter smithii ATCC 35061]
 gi|166225460|sp|A5UMJ1|SYT_METS3 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|148552291|gb|ABQ87419.1| threonyl-tRNA synthetase, ThrS [Methanobrevibacter smithii ATCC
           35061]
          Length = 608

 Score =  114 bits (284), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 106/409 (25%), Positives = 175/409 (42%), Gaps = 44/409 (10%)

Query: 246 HRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQ 302
           H KL RE +L  +  A D  G + W  KG  +   L  Y+   + D     I TP   D 
Sbjct: 196 HVKLMREKELCDYESASD-VGNLKWFPKGRLVRDLLADYVYNLVVDQGAMPIETPIFYD- 253

Query: 303 HLWQQSGHWDSYRANMFAVKCAD-----DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
                    D+   N+ A K  +     DT K+L    L+   C G   V      +++ 
Sbjct: 254 --------LDNEAINVHAAKFGERQYRTDTKKNL---MLRFACCFGAFRVMADPFITWKN 302

Query: 358 LPVRLAEFGSV-YRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIY 415
           LP +L E  +  +R E  G + GL R+R FT  D H FC        E  K  ++ I   
Sbjct: 303 LPAKLYELSTYSFRFEKKGEVVGLKRLRAFTMPDFHSFCADMNSTLEEFSKQTDMCIQTG 362

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
            D      ++  +T+       D ++   + I K VL              +L     ++
Sbjct: 363 VDLDVNYEIIFRATKDFYDENKDWMYSIGKKIGKPVL------------LEILPERKHYW 410

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
             K ++   D +GR  +  T+Q+D     RF+  Y+    ++ +P ++H +  GSIER I
Sbjct: 411 SCKIDFAAIDYLGRPIENPTVQIDVESGKRFDITYLGEDGKEHYPTILHCSPTGSIERVI 470

Query: 536 GIMIENFKGNL-------PLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRN 588
             ++E     L       P WLSPI+  + T+     ++A E+ + + + ++ ++ D R+
Sbjct: 471 CSLLEKTAIELDEKAPMLPTWLSPIEVRIITVGEDHKDFANELYDKINAENIRVDVDDRD 530

Query: 589 ETINYKIREHSIKKIPIIIICGD--KEASERSIGIRRFGSTTTQKVSLL 635
           E++  KIR  + + IP I + GD  KE+   S+ +R  G      V  L
Sbjct: 531 ESVGKKIRNAATEWIPYIFVVGDNEKESGVFSVTVRETGEKVDMTVDEL 579


>gi|159041076|ref|YP_001540328.1| threonyl-tRNA synthetase [Caldivirga maquilingensis IC-167]
 gi|189083601|sp|A8MBZ5|SYT_CALMQ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|157919911|gb|ABW01338.1| threonyl-tRNA synthetase [Caldivirga maquilingensis IC-167]
          Length = 613

 Score =  113 bits (283), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 87/300 (29%), Positives = 137/300 (45%), Gaps = 33/300 (11%)

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT--KE 398
           C    A+    + SYR LP+ + E    YR E  G      R+R F   D H+F    KE
Sbjct: 292 CFQQFAMIKDWVLSYRNLPLGMLEIADSYRYEQPGETVLCFRLRRFYMPDLHIFVKDLKE 351

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD--ALWDDAENIM---KGVLD 453
            M +  L++H  I        FE+I         +R+G D  +L++ ++      K  L 
Sbjct: 352 AM-DVGLRLHAKI--------FEEI---------RRIGRDYVSLYNVSKEFFDQNKDYLV 393

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS 513
            +       I   VL G   ++    EY + D + R  +  T Q D     RF   Y + 
Sbjct: 394 ELARREGKPILVRVLEGAKYYWVLNVEYHIIDELKRPREIATFQFDIGNAQRFGIKYRDE 453

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIMIENFKGN--------LPLWLSPIQAIVTTITSSAV 565
            +   +PV+IH A+ GSIERFI  +++    N        LP W++P+Q  V  ++S   
Sbjct: 454 GNNIKYPVIIHTAILGSIERFIFALLDTAAINEANGKVPALPTWITPVQVRVIPVSSGYN 513

Query: 566 EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
           E A E+A  ++     +E D R+ET+  KIR+     +P I++ G++EA   S+ +R  G
Sbjct: 514 EGAIELARRIEEAGFRVEVDDRDETVGRKIRDAETLWVPYIVVFGEREAKTGSLSVRVRG 573


>gi|218884527|ref|YP_002428909.1| threonyl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n]
 gi|218766143|gb|ACL11542.1| threonyl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n]
          Length = 614

 Score =  113 bits (282), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 91/324 (28%), Positives = 148/324 (45%), Gaps = 29/324 (8%)

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
           F L+   C    A+    + SY++LP  + E    YR E  G L    R+R F   D H+
Sbjct: 282 FILRYAACHQQFAMLRDWVISYKDLPFGVFEVADSYRLEQRGELALCFRLRKFYMPDLHI 341

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD-ALWDDAENIMKGVL 452
                +   E + +              ++  K+     K   S  AL++  +  ++   
Sbjct: 342 LT---RNIGEAIDVSM------------RVQAKIHEEAGKAGRSYVALYNITDEFLEKYR 386

Query: 453 DTIKNSSQDRINTGVLLG---EGAFYGP-KFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
           D +    + R    VLL     G +Y     EY + D + R  +  T Q+D     RFN 
Sbjct: 387 DKLVEFVK-REKYPVLLAVIPSGIYYWVLNVEYHIIDNLKRPREIATFQIDVGNGRRFNI 445

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFI------GIMIENFKGN--LPLWLSPIQAIVTTI 560
            YV+   EK HPV+IH A+ G +ER+I      G +IE       +P W+SP+Q  +  +
Sbjct: 446 AYVDEKGEKHHPVIIHTALLGGVERYIYMVLDTGALIEASGQTPYIPTWMSPVQVRIVPV 505

Query: 561 TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
           +    E+A +IA  + SH   ++ D R+ET+  KIR+   + IP II+ G++E +  +I 
Sbjct: 506 SKEYNEHAFKIAGEILSHGFRVDVDDRDETLGKKIRDAGKEWIPYIIVVGEREVNTGTIN 565

Query: 621 IRRFGSTTTQKVSLLDAIPILTKE 644
           IR   S   + + L + I +L +E
Sbjct: 566 IRVRRSNDQRVMKLEEFIKLLEEE 589


>gi|312137209|ref|YP_004004546.1| ser-tRNA(thr) hydrolase ;threonyl-tRNA synthetase [Methanothermus
           fervidus DSM 2088]
 gi|311224928|gb|ADP77784.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Methanothermus
           fervidus DSM 2088]
          Length = 608

 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 86/328 (26%), Positives = 151/328 (46%), Gaps = 30/328 (9%)

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV-YRNEPSGSLHGLMRVRGF 386
           I + +   L+   C G   +       +++LPV++ E  +  +R E  G + GL R+R F
Sbjct: 272 IHNKKELMLRYACCFGAFKILADSFLRWKDLPVKIYELSTYSFRLEQRGEVVGLKRLRSF 331

Query: 387 TQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
           T  D H  C   +Q   E  K   + +   +D       +KL+ +   R   D   ++ E
Sbjct: 332 TMPDLHTVCRDMQQALEEFEKQVEMCLKAAED-------LKLNHKAIFRFTKDFYEENKE 384

Query: 446 NIMKGVLDTIKNSSQDRINTGVLL----GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFN 501
            I          S   +IN  +L+        ++  K ++   D++GR  +  T+Q+D  
Sbjct: 385 WI---------KSLSRKINEPILIELLPKRKHYWVAKIDFAAVDSLGRPIENSTVQIDVE 435

Query: 502 LPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE--------NFKGNLPLWLSPI 553
              RFN  Y++   +   PV++H +  GSIER I  ++E        N    LP+WLSPI
Sbjct: 436 SGKRFNISYLDEDGKNKFPVILHCSPTGSIERVICSLLEENAKKINNNKLPMLPVWLSPI 495

Query: 554 QAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
              V  ++   V+YA +I   + S+ +  + D  NET++ K+R    + IP + + GDKE
Sbjct: 496 HVRVIPVSEKHVDYAIDIVKKINSYGIRADIDDTNETVSKKVRNAGKEWIPYVAVIGDKE 555

Query: 614 ASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            SE  + +    +   +++ L + I I+
Sbjct: 556 ISEDELTVTIRENDEKRELKLEELIEIV 583


>gi|261403652|ref|YP_003247876.1| threonyl-tRNA synthetase [Methanocaldococcus vulcanius M7]
 gi|261370645|gb|ACX73394.1| threonyl-tRNA synthetase [Methanocaldococcus vulcanius M7]
          Length = 620

 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 109/431 (25%), Positives = 192/431 (44%), Gaps = 48/431 (11%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
           +E ++  H K  +E D+    E    G   W+ KG  I   L  Y+   + D     + T
Sbjct: 191 KEHDEPPHVKFIKEKDICSYEEASDPGHFRWYPKGKLIRDLLADYVYNLVVDMGAMPVET 250

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P + D        H D +    +  +  +      +   L+   C G   +        R
Sbjct: 251 PIMYDLGNPAIREHADKFGERQYRFRQGN------KELMLRFAACFGQFMMKKDMYLLPR 304

Query: 357 ELPVRLAEFGSV-YRNEPSGSLHGLMRVRGFTQDDAHVFCTK--------EQMFNECLKI 407
            LP++L E  +  +R E  G L GL R+R FT  D H  C          E+ F ECL+ 
Sbjct: 305 YLPLKLYELSTYSFRYEQRGELVGLKRLRCFTMPDMHTVCLDLKQAMEEFEKQFWECLRT 364

Query: 408 -HNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
             +L +S    F F K                  +D+  +    +    K+ +   I   
Sbjct: 365 GDDLNLSYSVIFRFTK----------------DFFDEHRDWFFKIAKEYKSKTGKDIILE 408

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
           +L     ++  K +  + D++GR  +  T+Q+D     RFN   V+++  + +P+++H +
Sbjct: 409 ILPKRKHYWVGKVDIAVIDSLGRPIENPTVQIDVESAKRFN-IKVHTNEGEIYPIILHCS 467

Query: 527 VFGSIERFI-GIM----IENFKGN---LPLWLSPIQAIVTTITSSAVEYAQEIANLLKSH 578
             GSIER + G++    IE  +GN   LP+WLSPIQ  V  I     +YA ++A  LK +
Sbjct: 468 PTGSIERVLCGLLEKAAIEAERGNAPMLPVWLSPIQVRVIPIAERHYDYALKVAEKLKDN 527

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDK--EASERSIGIRRFGSTT---TQKVS 633
            + ++ D R ++++ KIR      IP +++ GD+  E+ + ++ +R+  +      +K+S
Sbjct: 528 KIRVDVDDREDSVSKKIRNAGRDWIPYVVVIGDEEMESDKLTVTVRKKSTLKKPHKEKMS 587

Query: 634 LLDAIPILTKE 644
           L + I ++ KE
Sbjct: 588 LEELIELIQKE 598


>gi|15679452|ref|NP_276569.1| threonyl-tRNA synthetase [Methanothermobacter thermautotrophicus
           str. Delta H]
 gi|3334360|sp|O27504|SYT_METTH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|2622569|gb|AAB85930.1| threonyl-tRNA synthetase [Methanothermobacter thermautotrophicus
           str. Delta H]
          Length = 605

 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 97/396 (24%), Positives = 171/396 (43%), Gaps = 31/396 (7%)

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQV 299
           E+  H +L RE  L         G + W+ +G  I   L  Y+   +  +    + TP +
Sbjct: 191 EEPPHVRLMREKGLADYEPSADVGHLRWYPRGRLIRDLLADYVYMLVTSEGAMPVETPIM 250

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            D        H + +    +        +K+ +   L+   C G   + +    +++ LP
Sbjct: 251 YDLEDEAIRVHAEKFGERQY-------RMKNRKELMLRYACCFGAFRILSDSFLTWKNLP 303

Query: 360 VRLAEFGSV-YRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKD 417
             + E  +  +R E  G + GL R+RGFT  D H  C   +Q   E  +   + +   +D
Sbjct: 304 ASIYELSTYSFRLEKKGEVVGLKRLRGFTMPDLHTVCADLDQSLEEFARQVEMCMRTGQD 363

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
                 ++  +T        + + + A+ I K VL  I  S +             ++  
Sbjct: 364 LQVNYEVIFRATADFYEEYREWVHEVADKIGKPVLLEILPSRKH------------YWIA 411

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K ++   D +GR  +  T+Q+D     RF   YVNS  E+ +P+++H +  GSIER I  
Sbjct: 412 KMDFAAIDYLGRPIENPTVQIDVESGERFGITYVNSDEEEVNPIILHCSPTGSIERVICS 471

Query: 538 MIENFK-------GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
           ++E            LPLWLSP Q  V  I    +EYA ++ + L +  +  + D R+ET
Sbjct: 472 LLEKTAIEMDEKPPMLPLWLSPTQVRVLPIAERHMEYASDLVSELIAADVRADLDDRSET 531

Query: 591 INYKIREHSIKKIPIIIICGDKEASER-SIGIRRFG 625
           +  KIR  +   +P +++ GD E   + ++ +R  G
Sbjct: 532 LGKKIRNAAQDWVPYVVVIGDSEMEGKLTVNVRETG 567


>gi|91773300|ref|YP_565992.1| threonyl-tRNA synthetase [Methanococcoides burtonii DSM 6242]
 gi|121684342|sp|Q12WD4|SYT_METBU RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|91712315|gb|ABE52242.1| Threonyl-tRNA synthetase [Methanococcoides burtonii DSM 6242]
          Length = 635

 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 94/376 (25%), Positives = 171/376 (45%), Gaps = 41/376 (10%)

Query: 263 SGVIFWHRKGWKIFQTLIS--YMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           SG + ++ KG ++ ++LI    +    K    E+ TP + D +      + D + A  ++
Sbjct: 234 SGNMRYYPKG-RLMKSLIENFVLEESSKIGAMEVETPLMYDMNHPTLKKYLDRFPARQYS 292

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSV-YRNEPSGSLH 378
           ++       D R   L+   C G   + NH +  SY+ LP+++ E     +R E  G L 
Sbjct: 293 IES------DKRHMFLRFAACFGQF-LMNHDMTISYKNLPLKMIEMTRYSFRKEQRGELV 345

Query: 379 GLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGS 437
           GL R+R FT  D H  C   E   ++  + +++ I I +  G +    +++ R  +    
Sbjct: 346 GLRRLRAFTMPDMHTLCPDMEAAISQFGEQYSMCIDILRKIGIDVSDFEVAIRFTRE--- 402

Query: 438 DALWDDAENIMKGVLDTIKNSSQDRINTGVLL----GEGAFYGPKFEYILKDAIGRDWQC 493
              +DD    +  +          +++  VL+        ++  KFE+   DAI +    
Sbjct: 403 --FYDDNREFITEL--------AKKVDKPVLVEMWDTRFFYFVLKFEFNFVDAIAKASAL 452

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK--------GN 545
            T+Q+D     R++  YV+++ +   P ++H +  G+IER I  ++E            N
Sbjct: 453 STVQIDVENAERYDINYVDANGKINRPTILHCSPSGAIERCIYALLEKAAMDAEEGKVPN 512

Query: 546 LPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPI 605
           LP+WLSP Q  V  I    +++AQE+A+ L       + D R ET+  KIR+   + IP 
Sbjct: 513 LPVWLSPTQVRVIPIAERHMDFAQEVADSLLCR---ADIDDREETVGKKIRDAGREWIPY 569

Query: 606 IIICGDKEASERSIGI 621
           + + GD E     + +
Sbjct: 570 VAVIGDSEVESGKVTV 585


>gi|315425261|dbj|BAJ46929.1| threonyl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum]
          Length = 593

 Score =  112 bits (279), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 96/416 (23%), Positives = 180/416 (43%), Gaps = 24/416 (5%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTP 297
           L E  + +H K+ R + +       SG + +  +G  I+  +  Y  + ++    E+  P
Sbjct: 172 LNEVSEPEHGKVLRRLGIDWEELSDSGHMHYGPEGTIIYDLISDYASKIVR----ELGFP 227

Query: 298 Q--VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
              V   +L+          A++F  +     + D R + ++   C    A+  + + SY
Sbjct: 228 VYFVKGTNLFSLESRPIREHASLFGQRMYKVEV-DGRPYVMRYAACFQQFALARNWVISY 286

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISI 414
           R LP  + E    YR E  G L    R+R  +  D HVFC    +      KIH+ I S 
Sbjct: 287 RSLPFGMFEVADSYRLEQRGELVLGFRLRKMSMPDLHVFCRDIPEALQIVEKIHDKIYSE 346

Query: 415 YKDFGFEKI-MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
            +  G +   +  L++R          +++     + +L   K   +  + +        
Sbjct: 347 IEKLGRDYYSLYNLTSR--------KFFEENRGFFQKLL---KREKKPVLLSFYPENSSY 395

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           ++    EY + D  GR  + GT+Q+D     RF   YV    EK +PV++H A+ G++ER
Sbjct: 396 YWVLNIEYHIIDKFGRPREIGTVQIDVGNAERFGITYVEKDGEKKYPVILHSALIGTVER 455

Query: 534 FIGIMIEN----FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE 589
           ++  +++         LP WL P Q  +  +     + A ++A  +  + + ++ D R E
Sbjct: 456 YLYAVVDTALSKTPPTLPTWLCPTQLRILPLNEKYNKRAVQLAEKITKYGIRVDVDDRPE 515

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           T+  K+ E     IP +   G KEA + ++ IR  G    +++ L   + ++ KE+
Sbjct: 516 TLAKKVYEAETSWIPYVATLGPKEAKKGTLAIRIRGKKGVKQMRLKPLVKLIQKET 571


>gi|327311872|ref|YP_004338769.1| threonyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
 gi|326948351|gb|AEA13457.1| threonyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
          Length = 612

 Score =  112 bits (279), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 91/352 (25%), Positives = 159/352 (45%), Gaps = 45/352 (12%)

Query: 310 HWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVY 369
           H   +   ++ V+   D+I       L+   C    A+    + SYR LP  + E    Y
Sbjct: 265 HAKLFGERLYIVETDVDSI-------LRYAACFQQFAMAKDWVISYRNLPFGMLEIADSY 317

Query: 370 RNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL----KIHNLIISIYKDFGFEKIMV 425
           R E  G    L R+R F   D H+F       NE +    K+H  I        FE+I  
Sbjct: 318 RYEQPGETVLLFRLRRFYMPDLHIFTKN---LNEAIEVTYKLHEKI--------FEEI-- 364

Query: 426 KLSTRPEKRVGSD--ALWDDAENIMKGVLDTIKNSSQDR---INTGVLLGEGAFYGPKFE 480
                  +++  D  +L++      KG  D +   ++     I   +L  +  ++    E
Sbjct: 365 -------RKINRDYVSLYNITAEFYKGHKDYLVELAKREGKPILLRILPEQKYYWVLNVE 417

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           + + D +GR  +  T Q+D     RF   Y++  ++  +PV+IH A+ GS+ER+I  + +
Sbjct: 418 FHIIDELGRPREIATFQIDVGNAMRFGIKYIDEENKVKYPVIIHTAILGSVERYIFALFD 477

Query: 541 NF-----KGN---LPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
                  +G    LP W++P+Q  +  +    +  A ++A+ L+   + ++ D R ET++
Sbjct: 478 TAALMEKRGEVPRLPTWITPVQVRIIPVNREYLRPASDLADELERRGIRVDIDDREETLS 537

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            KIR+   + IP II+ G KEAS   + +R  G    Q +S  D + ++ KE
Sbjct: 538 RKIRDAEREWIPYIIVIGQKEASSNMLTVRIRGKGQVQ-MSRQDLVEVVEKE 588


>gi|315425492|dbj|BAJ47154.1| threonyl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum]
 gi|315427484|dbj|BAJ49088.1| threonyl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum]
 gi|315427502|dbj|BAJ49105.1| threonyl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum]
          Length = 608

 Score =  112 bits (279), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 96/416 (23%), Positives = 180/416 (43%), Gaps = 24/416 (5%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTP 297
           L E  + +H K+ R + +       SG + +  +G  I+  +  Y  + ++    E+  P
Sbjct: 187 LNEVSEPEHGKVLRRLGIDWEELSDSGHMHYGPEGTIIYDLISDYASKIVR----ELGFP 242

Query: 298 Q--VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
              V   +L+          A++F  +     + D R + ++   C    A+  + + SY
Sbjct: 243 VYFVKGTNLFSLESRPIREHASLFGQRMYKVEV-DGRPYVMRYAACFQQFALARNWVISY 301

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISI 414
           R LP  + E    YR E  G L    R+R  +  D HVFC    +      KIH+ I S 
Sbjct: 302 RSLPFGMFEVADSYRLEQRGELVLGFRLRKMSMPDLHVFCRDIPEALQIVEKIHDKIYSE 361

Query: 415 YKDFGFEKI-MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
            +  G +   +  L++R          +++     + +L   K   +  + +        
Sbjct: 362 IEKLGRDYYSLYNLTSR--------KFFEENRGFFQKLL---KREKKPVLLSFYPENSSY 410

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           ++    EY + D  GR  + GT+Q+D     RF   YV    EK +PV++H A+ G++ER
Sbjct: 411 YWVLNIEYHIIDKFGRPREIGTVQIDVGNAERFGITYVEKDGEKKYPVILHSALIGTVER 470

Query: 534 FIGIMIEN----FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE 589
           ++  +++         LP WL P Q  +  +     + A ++A  +  + + ++ D R E
Sbjct: 471 YLYAVVDTALSKTPPTLPTWLCPTQLRILPLNEKYNKRAVQLAEKITKYGIRVDVDDRPE 530

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           T+  K+ E     IP +   G KEA + ++ IR  G    +++ L   + ++ KE+
Sbjct: 531 TLAKKVYEAETSWIPYVATLGPKEAKKGTLAIRIRGKKGVKQMRLKPLVKLIQKET 586


>gi|222445506|ref|ZP_03608021.1| hypothetical protein METSMIALI_01146 [Methanobrevibacter smithii
           DSM 2375]
 gi|222435071|gb|EEE42236.1| hypothetical protein METSMIALI_01146 [Methanobrevibacter smithii
           DSM 2375]
          Length = 608

 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 105/409 (25%), Positives = 175/409 (42%), Gaps = 44/409 (10%)

Query: 246 HRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQ 302
           H KL RE +L  +  A D  G + W  KG  +   L  Y+   + D     I TP   D 
Sbjct: 196 HVKLMREKELCDYESASD-VGNLKWFPKGRLVRDLLADYVYNLVVDQGAMPIETPIFYD- 253

Query: 303 HLWQQSGHWDSYRANMFAVKCAD-----DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
                    D+   N+ A K  +     DT K+L    L+   C G   V      +++ 
Sbjct: 254 --------LDNEAINVHAAKFGERQYRTDTKKNL---MLRFACCFGAFRVMADPFITWKN 302

Query: 358 LPVRLAEFGSV-YRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIY 415
           LP +L E  +  +R E  G + GL R+R FT  D H FC        E  K  ++ I   
Sbjct: 303 LPAKLYELSTYSFRFEKKGEVVGLKRLRAFTMPDFHSFCADMNSTLEEFSKQTDMCIQTG 362

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
            D      ++  +T+       + ++   + I K VL              +L     ++
Sbjct: 363 VDLDVNYEIIFRATKDFYDENKEWMYSIGKKIGKPVL------------LEILPERKHYW 410

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
             K ++   D +GR  +  T+Q+D     RF+  Y+    ++ +P ++H +  GSIER I
Sbjct: 411 SCKIDFAAIDYLGRPIENPTVQIDVESGKRFDITYLGEDGKEHYPTILHCSPTGSIERVI 470

Query: 536 GIMIENFKGNL-------PLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRN 588
             ++E     L       P WLSPI+  + T+     ++A E+ + + + ++ ++ D R+
Sbjct: 471 CSLLEKTAIELDEKAPMLPTWLSPIEVRIITVGEDHKDFANELYDKINAENIRVDVDDRD 530

Query: 589 ETINYKIREHSIKKIPIIIICGD--KEASERSIGIRRFGSTTTQKVSLL 635
           E++  KIR  + + IP I + GD  KE+   S+ +R  G      V  L
Sbjct: 531 ESVGKKIRNAATEWIPYIFVVGDNEKESGVFSVTVRETGEKVDMTVDEL 579


>gi|261349933|ref|ZP_05975350.1| threonine--tRNA ligase [Methanobrevibacter smithii DSM 2374]
 gi|288860716|gb|EFC93014.1| threonine--tRNA ligase [Methanobrevibacter smithii DSM 2374]
          Length = 608

 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 105/409 (25%), Positives = 175/409 (42%), Gaps = 44/409 (10%)

Query: 246 HRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQ 302
           H KL RE +L  +  A D  G + W  KG  +   L  Y+   + D     I TP   D 
Sbjct: 196 HVKLMREKELCDYESASD-VGNLKWFPKGRLVRDLLADYVYNLVVDQGAMPIETPIFYD- 253

Query: 303 HLWQQSGHWDSYRANMFAVKCAD-----DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
                    D+   N+ A K  +     DT K+L    L+   C G   V      +++ 
Sbjct: 254 --------LDNEAINVHAAKFGERQYRTDTKKNL---MLRFACCFGAFRVMADPFITWKN 302

Query: 358 LPVRLAEFGSV-YRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIY 415
           LP +L E  +  +R E  G + GL R+R FT  D H FC        E  K  ++ I   
Sbjct: 303 LPAKLYELSTYSFRFEKKGEVVGLKRLRAFTMPDFHSFCADMNSTLEEFSKQTDMCIQTG 362

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
            D      ++  +T+       + ++   + I K VL              +L     ++
Sbjct: 363 VDLDVNYEIIFRATKDFYDENKEWMYSIGKKIGKPVL------------LEILPERKHYW 410

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
             K ++   D +GR  +  T+Q+D     RF+  Y+    ++ +P ++H +  GSIER I
Sbjct: 411 SCKIDFAAIDYLGRPIENPTVQIDVESGKRFDITYLGEDGKEHYPTILHCSPTGSIERVI 470

Query: 536 GIMIENFKGNL-------PLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRN 588
             ++E     L       P WLSPI+  + T+     ++A E+ + + + ++ ++ D R+
Sbjct: 471 CSLLEKTAIELDEKAPMLPTWLSPIEVRIITVGEDHKDFANELYDKINAENIRVDVDDRD 530

Query: 589 ETINYKIREHSIKKIPIIIICGD--KEASERSIGIRRFGSTTTQKVSLL 635
           E++  KIR  + + IP I + GD  KE+   S+ +R  G      V  L
Sbjct: 531 ESVGKKIRNAATEWIPYIFVVGDNEKESGVFSVTVRETGEKVDMTVDEL 579


>gi|126459249|ref|YP_001055527.1| threonyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
 gi|166225487|sp|A3MTU4|SYT_PYRCJ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|126248970|gb|ABO08061.1| aminoacyl-transfer RNA synthetase, class II [Pyrobaculum
           calidifontis JCM 11548]
          Length = 607

 Score =  110 bits (275), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 73/296 (24%), Positives = 131/296 (44%), Gaps = 21/296 (7%)

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC 395
           L+   C    A+    + SYR LP  + E    YR+E  G    L R+R F   D H+F 
Sbjct: 281 LRYAACFQQFAMAKDWVISYRNLPFGMLEIADSYRHEQPGETVVLFRLRRFYMPDLHIFT 340

Query: 396 TK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDT 454
               +      K+H  I       G   + +   T    +   D L + A    K +L  
Sbjct: 341 KDLAEAVEVSYKVHEAIFREIGKLGRTYVSLYNVTEEFYKSHRDYLVELARREGKPIL-- 398

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH 514
                       +L  +  ++    EY + D +GR  +  T Q+D     RF   YV+ +
Sbjct: 399 ----------VRILPTQKYYWVLNVEYHIVDELGRPREIATFQIDVGNAQRFGIKYVDEN 448

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIENFKG--------NLPLWLSPIQAIVTTITSSAVE 566
           ++  +PV+IH A+ GS+ER++  + +             LP WL+P+Q  +  +    ++
Sbjct: 449 NQVKYPVIIHTAIIGSVERYLYAVFDTIAKAEREGKTPRLPTWLAPVQVRIIPVARDNLK 508

Query: 567 YAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           +A E+A+ L+   + ++ D R+ET++ +IR+     +P + + G KE    ++ +R
Sbjct: 509 FAMEVADKLEEAGIRVDVDDRDETLSKRIRDAETSWVPYVCVVGSKEEETGTLSVR 564


>gi|298674446|ref|YP_003726196.1| threonyl-tRNA synthetase [Methanohalobium evestigatum Z-7303]
 gi|298287434|gb|ADI73400.1| threonyl-tRNA synthetase [Methanohalobium evestigatum Z-7303]
          Length = 637

 Score =  110 bits (275), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 92/366 (25%), Positives = 168/366 (45%), Gaps = 37/366 (10%)

Query: 263 SGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG + ++ +G  I   L +Y +   I+    E+ TP + D +      + D + A  +++
Sbjct: 236 SGNLRYYPRGRFIKSLLENYVLDEAIRSGAMEVETPIMYDMNHPTLKKYLDRFPARQYSI 295

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV-YRNEPSGSLHGL 380
           +       D R   L+   C G   + +    SY+ LP+++ E     +R E  G L G+
Sbjct: 296 ES------DKRRLFLRFAACFGQFLMSHDMTISYKNLPLKMVEMTRYSFRKEQRGELVGM 349

Query: 381 MRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFE----KIMVKLSTRPEKRV 435
            R+R FT  D H FC   +Q  +E    + + I+   + G +    ++ ++  TR     
Sbjct: 350 KRLRSFTMPDMHTFCEDMDQSISEFDDQYKMCINTLDNIGVDVDDYEVAIRF-TRDFYEN 408

Query: 436 GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGT 495
             D + + A+ + K VL  + ++   R    VL         KFE+   DA+G+     T
Sbjct: 409 NKDFITEMAKTVNKPVLVEMWDT---RFFYFVL---------KFEFNFIDALGKASALST 456

Query: 496 IQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN--------LP 547
           +Q+D      ++  Y++ + E   P M+H +  G+IER I  ++E             LP
Sbjct: 457 VQIDVENAETYDISYIDRNGESKRPTMLHCSPSGAIERCIYALLEKNAMKIDNGEVPMLP 516

Query: 548 LWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIII 607
           +WLSP Q  +  +     ++A++I   L   +  ++ D R +T+  KIRE   + IP ++
Sbjct: 517 VWLSPTQVRIIPVHEHHFDFAEKIYEQL---NCRVDIDDREDTVGKKIREAGREWIPYVV 573

Query: 608 ICGDKE 613
           + GD+E
Sbjct: 574 VIGDRE 579


>gi|288561385|ref|YP_003424871.1| threonyl-tRNA synthetase ThrS [Methanobrevibacter ruminantium M1]
 gi|288544095|gb|ADC47979.1| threonyl-tRNA synthetase ThrS [Methanobrevibacter ruminantium M1]
          Length = 608

 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 104/418 (24%), Positives = 180/418 (43%), Gaps = 39/418 (9%)

Query: 246 HRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           H K+ RE +L  + IA D  G + W+ KG  +   L  Y+   + D     I TP   D 
Sbjct: 197 HVKIMREKELCDYEIASD-IGNLKWYPKGRLVRDLLADYVYNFVVDLGAMPIETPIFYDL 255

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
                  H   +    +       T KDL    L+   C G   V      +++ LP ++
Sbjct: 256 ANDAIREHAAKFGERQYKTA----TKKDL---MLRFACCFGAFRVLGDSFLTWKNLPAKV 308

Query: 363 AEFGSV-YRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
            E  +  +R E  G + GL R+R FT  D H FC               +    ++F  +
Sbjct: 309 YELSTYSFRFEKRGEVVGLKRLRAFTMPDMHSFCAD-------------MPQALEEFDAQ 355

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG----EGAFYGP 477
             M  + T  +  V  +A++   E+  +   + ++ +++ RI   +LL        ++  
Sbjct: 356 VDMC-VQTGVDLDVNYEAIFRATEDFYEENKEWMEATAK-RIGKPLLLEILPERKHYWSC 413

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K ++   D +GR  +  T+Q+D     RF   Y++      +P+++H +  GS+ER I  
Sbjct: 414 KIDFAAIDYLGRPIENPTVQIDVESGKRFGIEYIDEEENPQNPIILHCSPTGSVERVICS 473

Query: 538 MIENFKGN------LPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           ++EN          LP WLSP Q  +  I    +EYA ++A+ + + ++ ++ D  ++ +
Sbjct: 474 LLENTAKEDGKAPMLPTWLSPSQVRILPIGEKHLEYANQLADKIAAENIRVDLDNSDDRV 533

Query: 592 NYKIREHSIKKIPIIIICGDKEASER--SIGIRRFGSTTTQKVSLLDAIPILTKESLP 647
             KIR  S + +P II+ GDKE      S+ +R  G         L A      E +P
Sbjct: 534 GKKIRSASKEWVPYIIVIGDKEVENDVYSVTVRESGEKVDMTAEELIAEVKAKTEGMP 591


>gi|282163066|ref|YP_003355451.1| threonyl-tRNA synthetase [Methanocella paludicola SANAE]
 gi|282155380|dbj|BAI60468.1| threonyl-tRNA synthetase [Methanocella paludicola SANAE]
          Length = 636

 Score =  108 bits (270), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 112/472 (23%), Positives = 204/472 (43%), Gaps = 71/472 (15%)

Query: 176 QGEWFDLCRG--PHVRSTG-----QVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQ 228
           +G   ++C G  P V S       ++K +F +M V G           L       +   
Sbjct: 141 EGSTINICAGEKPEVVSEAVKNEEKLKSYFYVMDVDGT----------LKDPKTFDYKGH 190

Query: 229 QELTQYLYFLEESEKR------DHRKLAREMDLFHIAEDGS--GVIFWHRKGWKIFQTLI 280
           ++L  ++ + E ++KR       H +L R ++L    E GS  G + ++ KG  +   L 
Sbjct: 191 EKLKAFVDY-EMAKKRAVDRVPPHVELMRRLELADY-EPGSDPGNMRFYPKGRMVKNLLE 248

Query: 281 SY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPM 339
           +Y +    K    E+ TP + D        + D + A  + V      I D +   L+  
Sbjct: 249 NYVLMEAAKKGAMEVETPIMYDMEHPTLKKYLDRFPARQYTV------IADKKNLFLRFA 302

Query: 340 NCPGHVAVFNHGLKSYRELPVRLAEFGSV-YRNEPSGSLHGLMRVRGFTQDDAHVFCTK- 397
            C G   + +    SY+ LP+++ E     +R E  G L GL R+R FT  D H  C   
Sbjct: 303 ACFGQFLMSHDMTISYKNLPLKMIELTRYSFRKEQRGELVGLRRLRAFTMPDMHTLCADM 362

Query: 398 -------EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKG 450
                     +  C+   + I    KD+   ++ ++ +            +D  +  +KG
Sbjct: 363 AGATSEFRDQYEMCINTLDTIGLTLKDY---EVAIRFTR---------DFYDQNKGFIKG 410

Query: 451 VLDTIKNSSQDRINTGVLLGEGAFYGP-KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAF 509
           +   +K + +  +    +  +  FY   KFE+   D++ +     T+Q+D     R++  
Sbjct: 411 L---VKRAGKPVVIE--MWDQRFFYFVLKFEFNFIDSLDKASALSTVQIDVENAERYDIT 465

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGI-----MIENFKGN---LPLWLSPIQAIVTTIT 561
           YV+    K +P ++H +  G+IER I        +E+ KG    LP+WLSP Q  + +++
Sbjct: 466 YVDQDGSKKYPTILHCSPSGAIERCIYAQLEKQFMESEKGQVPMLPVWLSPTQVRIISLS 525

Query: 562 SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
               +Y + +A  L+ + + I  D R ET++ K+R+   + IP ++  GD E
Sbjct: 526 DRHADYCRRLAGELRPNRVDI--DDREETVSKKVRDAGKEWIPYVVTIGDAE 575


>gi|213863101|ref|ZP_03386356.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
          Length = 86

 Score =  108 bits (269), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 46/86 (53%), Positives = 60/86 (69%)

Query: 491 WQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL 550
           WQCGT+Q+DF+LPSR +A YV   +E+  PVMIHRA+ GS+ERFIGI+ E F G  P WL
Sbjct: 1   WQCGTVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAGFFPTWL 60

Query: 551 SPIQAIVTTITSSAVEYAQEIANLLK 576
           +P+Q ++  IT S  EY  E+   L 
Sbjct: 61  APVQVVIMNITDSQSEYVNELTQKLS 86


>gi|77026364|gb|ABA61842.1| hypothetical threonine tRNA synthetase [Pimelobacter simplex]
          Length = 256

 Score =  108 bits (269), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 62/163 (38%), Positives = 94/163 (57%), Gaps = 22/163 (13%)

Query: 49  DLSDPVREGS-IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD 107
           DLS  + +G  +E +    P  L ++RHS AH++A+AVQ ++PE ++ IGP I+DGFYYD
Sbjct: 95  DLSYALADGDEVEGVLIGSPDGLDILRHSTAHVLAQAVQQVFPEAKLGIGPPIQDGFYYD 154

Query: 108 FDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL----- 162
           FD E PF  ++L ++E +M++II  +  F ++  + E A  L E   E YKVE++     
Sbjct: 155 FDVETPFVPEDLVKLETRMRKIIKENQRFDRRVTTDEDA--LVELADEPYKVELIGLKGN 212

Query: 163 --------ESIPAKENVTLY----RQGE--WFDLCRGPHVRST 191
                    +      +T+Y    R GE  W DLCRGPH+ +T
Sbjct: 213 AGEAAEGAAAEVGAGELTIYDNINRNGEVAWKDLCRGPHLPTT 255


>gi|224539754|ref|ZP_03680293.1| hypothetical protein BACCELL_04663 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224518632|gb|EEF87737.1| hypothetical protein BACCELL_04663 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 131

 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 54/130 (41%), Positives = 82/130 (63%), Gaps = 2/130 (1%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIEIITP 64
           IK+TFPDGS++ +    TG  +AESIS  LA++ +A  +NG++ DL  P+ E +  ++  
Sbjct: 2   IKITFPDGSVREYNEGVTGLQIAESISSRLAQEVLACGVNGEIYDLGRPINEDAEFVLYK 61

Query: 65  -EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQI 122
            ED +      H+ AH++AEA+Q ++P +Q  IGP IE+GFYYD D  E      +L  I
Sbjct: 62  WEDEQGKHAFWHTSAHLLAEALQELYPGIQFGIGPAIENGFYYDVDPGEAVIKESDLPAI 121

Query: 123 EKKMQEIIAR 132
           E KM E++A+
Sbjct: 122 EAKMAELVAK 131


>gi|260900771|ref|ZP_05909166.1| threonine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
 gi|308110613|gb|EFO48153.1| threonine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
          Length = 134

 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 51/125 (40%), Positives = 83/125 (66%), Gaps = 2/125 (1%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPE 65
           +T PDGS + F    +  +VA+SI   LAK  +A  +NG   D  D + E  S+EIIT +
Sbjct: 4   ITLPDGSQRQFDNPVSTMEVAQSIGPGLAKATIAGRVNGSRVDACDLIEEDASLEIITVK 63

Query: 66  DP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  A++ ++P+ ++AIGP I++GFYYD D ++  + ++L +IEK
Sbjct: 64  DEVDGLEIVRHSCAHLLGHALKQLYPQAKMAIGPTIDNGFYYDIDLDESLTQEDLEKIEK 123

Query: 125 KMQEI 129
           +M+E+
Sbjct: 124 RMKEL 128


>gi|150401612|ref|YP_001325378.1| threonyl-tRNA synthetase [Methanococcus aeolicus Nankai-3]
 gi|166223353|sp|A6UW94|SYT_META3 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|150014315|gb|ABR56766.1| threonyl-tRNA synthetase [Methanococcus aeolicus Nankai-3]
          Length = 630

 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 100/370 (27%), Positives = 161/370 (43%), Gaps = 40/370 (10%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           +G   W+ KG  I   L  Y+   + +++   + TP + D        H D +    +  
Sbjct: 226 AGHFRWYPKGKLIRDLLQDYVYNMVVENNGMPVETPVMYDLGNKAIKEHADKFGERQYRF 285

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV-YRNEPSGSLHGL 380
           K  +   KDL    L+   C G   +        + LP++L E  +  +R E  G L GL
Sbjct: 286 KQGN---KDL---MLRFAACFGQFMMKKDMYILPKHLPLKLYELSTYSFRYEQRGELVGL 339

Query: 381 MRVRGFTQDDAHVFC--TK------EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
            R+RGFT  D H  C  TK      E  F  CLK  + + + Y                 
Sbjct: 340 KRLRGFTMPDMHTVCKDTKQTIEEFENQFWMCLKTGDDLNTPYSTIF------------- 386

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
            R   D   ++ E   K   +  +   +D I   ++     ++  K +  + D+ GR  +
Sbjct: 387 -RFTEDFFEENKEWFFKVAKEYKEKYGKDVI-LELIPERKHYWVGKVDMAVIDSFGRPIE 444

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN------- 545
             T+Q+D     RFN   V+  +EK +PV++H +  GSIER +  ++E    +       
Sbjct: 445 NPTVQIDVESAKRFN-IVVHDGNEKTYPVILHCSPTGSIERVLCGLLEKASLDADAGAPP 503

Query: 546 -LPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
            LP+WLSPIQA V  +  +  EYA  +A  L+ + +  + D R E++  KIR      +P
Sbjct: 504 MLPVWLSPIQARVIPVADAHSEYALSVAKKLRENGIRADFDDREESVGKKIRNAGKDWVP 563

Query: 605 IIIICGDKEA 614
            +I+ GDKE 
Sbjct: 564 FVIVIGDKEV 573


>gi|269966331|ref|ZP_06180418.1| Threonyl-tRNA synthetase [Vibrio alginolyticus 40B]
 gi|269829070|gb|EEZ83317.1| Threonyl-tRNA synthetase [Vibrio alginolyticus 40B]
          Length = 146

 Score =  107 bits (267), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 51/125 (40%), Positives = 83/125 (66%), Gaps = 2/125 (1%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPE 65
           +T PDGS + F    +  +VA+SI   LAK  +A  +NG   D  D + E  S+EIIT +
Sbjct: 4   ITLPDGSQRQFDNPVSTMEVAQSIGPGLAKATIAGRVNGNRVDACDLIEEDASLEIITVK 63

Query: 66  DP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  A++ ++P+ ++AIGP I++GFYYD D ++  + ++L +IEK
Sbjct: 64  DEVDGLEIVRHSCAHLLGHALKQLYPQAKMAIGPTIDNGFYYDIDLDESLTQEDLEKIEK 123

Query: 125 KMQEI 129
           +M+E+
Sbjct: 124 RMKEL 128


>gi|254508889|ref|ZP_05120998.1| threonyl-tRNA synthetase [Vibrio parahaemolyticus 16]
 gi|219548203|gb|EED25219.1| threonyl-tRNA synthetase [Vibrio parahaemolyticus 16]
          Length = 129

 Score =  107 bits (266), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 45/97 (46%), Positives = 66/97 (68%)

Query: 526 AVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD 585
           A+ GS+ERFIGI+IE + G  P WLSP QA++  IT    +YAQE+A  L+   +  + D
Sbjct: 1   AILGSLERFIGILIEEYFGFFPTWLSPEQAVIMNITDKQADYAQEVAQKLQKVGIRAKAD 60

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
            RNE I +KIREH++K++P +++CGD+E     I +R
Sbjct: 61  LRNEKIGFKIREHTLKRVPYMLVCGDQEMEAGEIAVR 97


>gi|296084982|emb|CBI28397.3| unnamed protein product [Vitis vinifera]
          Length = 149

 Score =  107 bits (266), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 57/136 (41%), Positives = 84/136 (61%), Gaps = 9/136 (6%)

Query: 216 MLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWK 274
           ML RIYGTAW  +++L  YL+F EE+++RDHR+L  ++DLF I  E G G++FWH KG  
Sbjct: 1   MLQRIYGTAWENEEQLKAYLHFKEEAKRRDHRRLGIDLDLFSIQDEAGGGLVFWHPKG-A 59

Query: 275 IFQTLI--SYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           I + +I  S+ +  I+  Y+ + TP V    LW+ SGH D YR NM++    +D +    
Sbjct: 60  IVRHIIEDSWKKIHIEHGYDLLYTPHVARADLWKTSGHLDFYRENMYSQITIEDEL---- 115

Query: 333 TFALKPMNCPGHVAVF 348
            + L+PMN   H+  F
Sbjct: 116 -YQLRPMNWEMHLCFF 130


>gi|289472550|gb|ADC97460.1| putative threonyl-tRNA synthetase [Amblyomma hebraeum]
          Length = 209

 Score =  106 bits (265), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 71/200 (35%), Positives = 101/200 (50%), Gaps = 10/200 (5%)

Query: 3   SDIKLTFPDGSIKNFPVHA---TGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-S 58
           + I +T PDG  K  P  +   T   +A  IS+ LA   V   +N  + DL  P+ E  S
Sbjct: 7   APITVTLPDG--KQVPAESWKTTPYQIAAGISKGLADNVVIAKVNKVLWDLDRPLEEDCS 64

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQP-FSSD 117
           +E++  ED     V  HS AH++ EA++ ++    +  GP IE GFYYD   +Q   S+ 
Sbjct: 65  LELLKFEDKEGEQVFWHSSAHVLGEALERLYGGC-LCYGPPIEGGFYYDMHLDQGGVSAV 123

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +   IE  M+ I+    PF +  L  E    +F+     +KV IL+        T+YR G
Sbjct: 124 DHPSIEGLMRNIVKERQPFERLELPKEDLLRMFQYN--PFKVRILQEKVQTPTTTVYRCG 181

Query: 178 EWFDLCRGPHVRSTGQVKKF 197
              DLCRGPHVR TG+VK  
Sbjct: 182 PLIDLCRGPHVRHTGKVKAL 201


>gi|256810117|ref|YP_003127486.1| threonyl-tRNA synthetase [Methanocaldococcus fervens AG86]
 gi|256793317|gb|ACV23986.1| threonyl-tRNA synthetase [Methanocaldococcus fervens AG86]
          Length = 618

 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 107/432 (24%), Positives = 191/432 (44%), Gaps = 48/432 (11%)

Query: 239 EESEKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
           +E ++  H K  +E D+    E   +G   W+ KG  I   L  Y+   + +     + T
Sbjct: 189 KEHDEPPHVKFIKEKDICSYEEASDAGHFRWYPKGKLIRDLLADYVYNMVVNLGAMPVET 248

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P + D        H D +    +  +  +      +   L+   C G   +        R
Sbjct: 249 PIMYDLGNPAIREHADKFGERQYRFRQGN------KELMLRFAACFGQFMMKKDMYLLPR 302

Query: 357 ELPVRLAEFGSV-YRNEPSGSLHGLMRVRGFTQDDAHVFCTK--------EQMFNECLKI 407
            LP++L E  +  +R E  G L GL R+R FT  D H  C          E+ F ECLK 
Sbjct: 303 YLPLKLYELSTYSFRYEQRGELVGLKRLRCFTMPDMHTVCLDLKQAMEEFEKQFWECLKT 362

Query: 408 -HNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
             +L +S    F F K                  +++  +    +    KN     +   
Sbjct: 363 GDDLDLSYSVIFRFTKY----------------FFEEHRDWFFKIAKEYKNKYGKDVILE 406

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
           +L     ++  K +  + D++GR  +  T+Q+D     RFN   V+++  + +P+++H +
Sbjct: 407 ILPKRKHYWVGKVDIAVIDSLGRPIENPTVQIDVESAKRFN-IKVHTNEGEVYPIILHCS 465

Query: 527 VFGSIERFI-GIM----IENFKGN---LPLWLSPIQAIVTTITSSAVEYAQEIANLLKSH 578
             GSIER + G++    IE  KG    LP+WLSPIQ  V  +     +YA +IA  L+ +
Sbjct: 466 PTGSIERVLCGLLEKAAIEAEKGKAPMLPVWLSPIQVRVIPVAERHYDYALKIAEKLREN 525

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKE--ASERSIGIRRFGSTT---TQKVS 633
           ++  + D R ++++ KIR    + IP +++ GD+E  + E ++ +R   +      +K++
Sbjct: 526 NIRADFDDREDSVSKKIRNAGKEWIPYVVVVGDEEMDSGELTVTVREKSTLKKPHKEKMT 585

Query: 634 LLDAIPILTKES 645
           L + I  + KE+
Sbjct: 586 LDELIDKIKKET 597


>gi|124027839|ref|YP_001013159.1| threonyl-tRNA synthetase [Hyperthermus butylicus DSM 5456]
 gi|166223348|sp|A2BLF3|SYT_HYPBU RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|123978533|gb|ABM80814.1| Threonyl-tRNA synthetase [Hyperthermus butylicus DSM 5456]
          Length = 625

 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 76/313 (24%), Positives = 151/313 (48%), Gaps = 42/313 (13%)

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
           D +   ++   C    ++    + SYR+LP+ + E    YR E SG +    R+R F   
Sbjct: 280 DKKHLVMRYAACHQQFSMLKDYVLSYRDLPLGMFEIADSYRLEQSGEVTLCFRLRRFYMP 339

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG---------SDAL 440
           D H+     +   E +KI              + + K+  R  +++G         ++  
Sbjct: 340 DLHILA---RSVEEAVKI-------------AEELQKIIHREAEKLGQTYYAVYNVTEDF 383

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP-KFEYILKDAIGRDWQCGTIQVD 499
           W++  N++   L+ ++   +  + T  +   G +Y     EY + D+ GR  +  T Q D
Sbjct: 384 WEEKRNLL---LELVRRDGKPALIT--VYPAGIYYWVVNVEYHIVDSAGRPREIATFQFD 438

Query: 500 FNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-----NFKGN---LPLWLS 551
                RF   YV+ ++++ +PV+IH A+ GSIER+I ++ +       +G    +P WL+
Sbjct: 439 VGNAKRFGIRYVDENNKEHYPVIIHTALIGSIERYIYMVFDAAVKMERRGQTPYIPTWLA 498

Query: 552 PIQAIVTTITSSA---VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIII 608
           PIQ  +  +  S+   + +A+++A+LL+ H + ++ D R  ++  +IR+ + + IP I +
Sbjct: 499 PIQVRLIPVNPSSEQQLSHAEKVASLLERHLIRVDIDDRQLSLGRRIRDAAREWIPYIAV 558

Query: 609 CGDKEASERSIGI 621
            GD+E    ++ +
Sbjct: 559 IGDREVETGTVNV 571


>gi|297712850|ref|XP_002832939.1| PREDICTED: threonyl-tRNA synthetase, cytoplasmic-like [Pongo
           abelii]
          Length = 177

 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 56/121 (46%), Positives = 75/121 (61%), Gaps = 7/121 (5%)

Query: 432 EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDW 491
           EK  G   +WD AE  ++  L+      +  +N+G    +GAFYGPK +  +KDAIGR  
Sbjct: 60  EKFFGDIEVWDQAEKQLENSLNEFGEKWE--LNSG----DGAFYGPKIDIQIKDAIGRYH 113

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL 550
           QC TIQ+DF LP RFN  YV+    +K  PV++HRA+ GS+ER I I+ EN+ G  P WL
Sbjct: 114 QCATIQLDFQLPIRFNLTYVSHDGDDKKKPVIVHRAILGSVERMIAILTENYGGKWPFWL 173

Query: 551 S 551
           S
Sbjct: 174 S 174


>gi|289472546|gb|ADC97458.1| putative threonyl-tRNA synthetase [Amblyomma americanum]
          Length = 209

 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/200 (35%), Positives = 101/200 (50%), Gaps = 10/200 (5%)

Query: 3   SDIKLTFPDGSIKNFPVHA---TGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-S 58
           + I +T PDG  K  P  +   T   +A  IS+ LA   V   +N  + DL  P+ E  +
Sbjct: 7   APITVTLPDG--KQVPAESWKTTPYQIAAGISKGLADNVVIAKVNKVLWDLDRPLEEDCT 64

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQP-FSSD 117
           +E++  ED     V  HS AH++ EA++ ++    +  GP IE GFYYD   +Q   S+ 
Sbjct: 65  LELLKFEDKEGEQVFWHSSAHVLGEALERLYGGC-LCYGPPIEGGFYYDMHVDQGGVSAV 123

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +   IE  M+ I+    PF +  L  E    +F+     +KV IL+        T+YR G
Sbjct: 124 DHPSIEGLMRNIVKERQPFERLELPKEDLLRMFQYN--PFKVRILQEKVQTPTTTVYRCG 181

Query: 178 EWFDLCRGPHVRSTGQVKKF 197
              DLCRGPHVR TG+VK  
Sbjct: 182 PLIDLCRGPHVRHTGKVKAL 201


>gi|289472544|gb|ADC97457.1| putative threonyl-tRNA synthetase [Amblyomma americanum]
          Length = 209

 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/200 (35%), Positives = 101/200 (50%), Gaps = 10/200 (5%)

Query: 3   SDIKLTFPDGSIKNFPVHA---TGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-S 58
           + I +T PDG  K  P  +   T   +A  IS+ LA   V   +N  + DL  P+ E  +
Sbjct: 7   APITVTLPDG--KQVPAESWKTTPYQIAAGISKGLADNVVIAKVNKVLWDLDRPLEEDCT 64

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQP-FSSD 117
           +E++  ED     V  HS AH++ EA++ ++    +  GP IE GFYYD   +Q   S+ 
Sbjct: 65  LELLKFEDKEGEQVFWHSSAHVLGEALERLYGGC-LCYGPPIEGGFYYDMHVDQGGVSAV 123

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +   IE  M+ I+    PF +  L  E    +F+     +KV IL+        T+YR G
Sbjct: 124 DHPSIEGLMRNIVKERQPFERLELPKEDLLRMFQYN--PFKVRILQEKVQTPTTTVYRCG 181

Query: 178 EWFDLCRGPHVRSTGQVKKF 197
              DLCRGPHVR TG+VK  
Sbjct: 182 PLIDLCRGPHVRHTGKVKAL 201


>gi|218458539|ref|ZP_03498630.1| threonyl-tRNA synthetase [Rhizobium etli Kim 5]
          Length = 104

 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 50/91 (54%), Positives = 63/91 (69%)

Query: 559 TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERS 618
           TITS A  Y  E+A  L+   L++ETDFRNE INYKIREHS+ K+P+II+CG KEA ER+
Sbjct: 1   TITSEADAYGLEVAEALREAGLNVETDFRNEKINYKIREHSVTKVPVIIVCGRKEAEERT 60

Query: 619 IGIRRFGSTTTQKVSLLDAIPILTKESLPPD 649
           + IRR GS     + L  A+  LT E+ PPD
Sbjct: 61  VNIRRLGSQDQVSMGLDAAVESLTLEATPPD 91


>gi|8039795|sp|Q58597|SYT_METJA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
          Length = 620

 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 106/432 (24%), Positives = 190/432 (43%), Gaps = 48/432 (11%)

Query: 239 EESEKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
           +E ++  H K  +E D+    E    G   W+ KG  +   L  Y+   + +     + T
Sbjct: 191 KEHDEPPHVKFIKEKDICSYEEASDPGHFRWYPKGKLMRDLLADYVYNLVVNMGAMPVET 250

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P + D        H D +    +  +  +      +   L+   C G   +        R
Sbjct: 251 PIMYDLGNPAIREHADKFGERQYRFRQGN------KELMLRFAACFGQFMMKKDMYLLPR 304

Query: 357 ELPVRLAEFGSV-YRNEPSGSLHGLMRVRGFTQDDAHVFCTK--------EQMFNECLKI 407
            LP++L E  +  +R E  G L GL R+R FT  D H  C          E+ F ECLK 
Sbjct: 305 YLPLKLYELSTYSFRYEQRGELVGLKRLRCFTMPDMHTVCLNLEQAMEEFEKQFWECLKT 364

Query: 408 -HNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
             +L +S    F F K                  +D+  +    +    KN     +   
Sbjct: 365 GDDLNLSYSVIFRFTK----------------DFFDEHRDWFFKIAKEYKNKYGKDVILE 408

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
           +L     ++  K +  + D++GR  +  T+Q+D     RF+   V+++  + +P+++H +
Sbjct: 409 ILPKRKHYWVGKVDIAVIDSLGRPIENPTVQIDVESAKRFD-IKVHTNEGEIYPIILHCS 467

Query: 527 VFGSIERFI-GIM----IENFKGN---LPLWLSPIQAIVTTITSSAVEYAQEIANLLKSH 578
             GSIER + G++    IE  KGN   LP+WLSPIQ  V  +     +YA ++A  L+ +
Sbjct: 468 PTGSIERVLCGLLEKAAIEAEKGNAPMLPVWLSPIQVRVIPVAERHYDYALKVAEKLREN 527

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDK--EASERSIGIRR---FGSTTTQKVS 633
           ++  + D R E+++ KIR    + +P +++ GD+  E+ + ++ IR          +K++
Sbjct: 528 NIRADFDDREESVSKKIRNAGKEWVPYVVVIGDEEMESDKLTVTIREKSTLKKPYKEKMT 587

Query: 634 LLDAIPILTKES 645
           L + I  + KE+
Sbjct: 588 LDELIERIKKET 599


>gi|15669383|ref|NP_248192.1| threonyl-tRNA synthetase [Methanocaldococcus jannaschii DSM 2661]
 gi|1591826|gb|AAB99201.1| threonyl-tRNA synthetase (thrS) [Methanocaldococcus jannaschii DSM
           2661]
          Length = 624

 Score =  105 bits (262), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 106/432 (24%), Positives = 190/432 (43%), Gaps = 48/432 (11%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
           +E ++  H K  +E D+    E    G   W+ KG  +   L  Y+   + +     + T
Sbjct: 195 KEHDEPPHVKFIKEKDICSYEEASDPGHFRWYPKGKLMRDLLADYVYNLVVNMGAMPVET 254

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P + D        H D +    +  +  +      +   L+   C G   +        R
Sbjct: 255 PIMYDLGNPAIREHADKFGERQYRFRQGN------KELMLRFAACFGQFMMKKDMYLLPR 308

Query: 357 ELPVRLAEFGSV-YRNEPSGSLHGLMRVRGFTQDDAHVFCTK--------EQMFNECLKI 407
            LP++L E  +  +R E  G L GL R+R FT  D H  C          E+ F ECLK 
Sbjct: 309 YLPLKLYELSTYSFRYEQRGELVGLKRLRCFTMPDMHTVCLNLEQAMEEFEKQFWECLKT 368

Query: 408 -HNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
             +L +S    F F K                  +D+  +    +    KN     +   
Sbjct: 369 GDDLNLSYSVIFRFTK----------------DFFDEHRDWFFKIAKEYKNKYGKDVILE 412

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
           +L     ++  K +  + D++GR  +  T+Q+D     RF+   V+++  + +P+++H +
Sbjct: 413 ILPKRKHYWVGKVDIAVIDSLGRPIENPTVQIDVESAKRFD-IKVHTNEGEIYPIILHCS 471

Query: 527 VFGSIERFI-GIM----IENFKGN---LPLWLSPIQAIVTTITSSAVEYAQEIANLLKSH 578
             GSIER + G++    IE  KGN   LP+WLSPIQ  V  +     +YA ++A  L+ +
Sbjct: 472 PTGSIERVLCGLLEKAAIEAEKGNAPMLPVWLSPIQVRVIPVAERHYDYALKVAEKLREN 531

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDK--EASERSIGIRR---FGSTTTQKVS 633
           ++  + D R E+++ KIR    + +P +++ GD+  E+ + ++ IR          +K++
Sbjct: 532 NIRADFDDREESVSKKIRNAGKEWVPYVVVIGDEEMESDKLTVTIREKSTLKKPYKEKMT 591

Query: 634 LLDAIPILTKES 645
           L + I  + KE+
Sbjct: 592 LDELIERIKKET 603


>gi|54309340|ref|YP_130360.1| hypothetical protein PBPRA2160 [Photobacterium profundum SS9]
 gi|46913776|emb|CAG20558.1| hypothetical protein PBPRA2160 [Photobacterium profundum SS9]
          Length = 79

 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 45/71 (63%), Positives = 56/71 (78%)

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AEFG+ +RNEPSG+LHGLMRVRGFTQDDAHVFCT+ Q+  E      ++   Y+ FGF+
Sbjct: 7   MAEFGACHRNEPSGALHGLMRVRGFTQDDAHVFCTENQVQQEVTSCIKMVYDTYQTFGFD 66

Query: 422 KIMVKLSTRPE 432
            I+VKLSTRPE
Sbjct: 67  NIVVKLSTRPE 77


>gi|307354084|ref|YP_003895135.1| threonyl-tRNA synthetase [Methanoplanus petrolearius DSM 11571]
 gi|307157317|gb|ADN36697.1| threonyl-tRNA synthetase [Methanoplanus petrolearius DSM 11571]
          Length = 610

 Score =  105 bits (261), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 76/290 (26%), Positives = 128/290 (44%), Gaps = 22/290 (7%)

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV-YRNEPSGSLHGLMRVRGFTQDD 390
           R   L+   C G  ++ +    S   LP+++ E  +  +R+E  G   GL R+R FT  D
Sbjct: 277 RNMMLRFAACFGMFSIMHDMHISPNTLPMKMYELSTYSFRHEQKGECIGLKRLRAFTMPD 336

Query: 391 AHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKG 450
            H  C       EC +              E++M+   T  +      A++   E+  K 
Sbjct: 337 MHSMCLDMNQTLECFE--------------EQLMMGWQTGKDLEYPLAAVFRCTEDFYKD 382

Query: 451 VLDTIKN---SSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFN 507
             + +K     S+  +    L     ++  K +    D  GR  +  T+Q+D     RF+
Sbjct: 383 HEEWVKKIVRMSEVPVLIETLSDRVHYWIAKIDLAAIDGQGRPIENPTVQIDVESAERFD 442

Query: 508 AFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTITSS 563
             Y +  +E+  P +IH +  GSIER I  ++EN        LP+WLSP Q  +  ++S 
Sbjct: 443 IKYYSVRNEEVRPPIIHCSPTGSIERVICALLENTASQEVPMLPVWLSPTQVRILPVSSK 502

Query: 564 AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
             EYA E+   +    +  + D R E++  KIRE  +  +P +++ GD E
Sbjct: 503 HTEYAGELCKKINGAGVRCDFDDREESVGKKIREAGMDWVPYVVVVGDSE 552


>gi|289192307|ref|YP_003458248.1| threonyl-tRNA synthetase [Methanocaldococcus sp. FS406-22]
 gi|288938757|gb|ADC69512.1| threonyl-tRNA synthetase [Methanocaldococcus sp. FS406-22]
          Length = 620

 Score =  104 bits (260), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 104/421 (24%), Positives = 181/421 (42%), Gaps = 59/421 (14%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
           +E ++  H K  +E D+    E    G   W+ KG  I   L  Y+   +       + T
Sbjct: 191 KEHDEPPHVKFIKEKDICSYEEASDPGHFRWYPKGKLIRDLLADYVYNLVVSMGAMPVET 250

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P + D        H D +    +  +  +      R   L+   C G   +        R
Sbjct: 251 PIMYDLGNKAIREHADKFGERQYRFRQGN------RELMLRFAACFGQFMMKKDMYLLPR 304

Query: 357 ELPVRLAEFGSV-YRNEPSGSLHGLMRVRGFTQDDAHVFCTK--------EQMFNECLKI 407
            LP++L E  +  +R E  G L GL R+R FT  D H  C          E+ F ECLK 
Sbjct: 305 YLPLKLYELSTYSFRYEQRGELVGLKRLRCFTMPDMHTVCLNLEQAMEEFEKQFWECLKT 364

Query: 408 -------HNLIISIYKDFGFE--KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNS 458
                  +++I    KDF  E      K++   + + G D + +        +L   K+ 
Sbjct: 365 GDDLNLSYSVIFRFTKDFFDEHRDWFFKIAKEYKSKYGKDVILE--------ILPKRKHY 416

Query: 459 SQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC 518
              +++  V+                D++GR  +  T+Q+D     RF+   V+++  + 
Sbjct: 417 WVGKVDIAVI----------------DSLGRPIENPTVQIDVESAKRFD-IKVHTNEGEV 459

Query: 519 HPVMIHRAVFGSIERFI-GIM----IENFKGN---LPLWLSPIQAIVTTITSSAVEYAQE 570
           +P+++H +  GSIER + G++    IE  +GN   LP+WLSPIQ  V  +     +YA +
Sbjct: 460 YPIILHCSPTGSIERVLCGLLEKAAIEAKEGNAPMLPVWLSPIQVRVIPVAERHYDYALK 519

Query: 571 IANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
           +A  L+  ++  + D R E+++ KIR    + IP +++ GD+E     + +     +T +
Sbjct: 520 VAEKLRESNIRADFDDREESVSKKIRNAGKEWIPYVVVVGDEEMESGKLTVTIREKSTLK 579

Query: 631 K 631
           K
Sbjct: 580 K 580


>gi|303243566|ref|ZP_07329908.1| threonyl-tRNA synthetase [Methanothermococcus okinawensis IH1]
 gi|302486127|gb|EFL49049.1| threonyl-tRNA synthetase [Methanothermococcus okinawensis IH1]
          Length = 631

 Score =  104 bits (259), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 99/405 (24%), Positives = 175/405 (43%), Gaps = 61/405 (15%)

Query: 246 HRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQ 302
           H K  RE ++  +  + D +G   W+ KG  I   L  Y+   + +++   + TP + D 
Sbjct: 209 HVKYIREKEICDYEPSSD-AGHFRWYPKGKLIRDLLEDYVYNMVVENNGMPVETPVMYDL 267

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
                  H D +    +  K  +      +   L+   C G   +        + LP++L
Sbjct: 268 GNKAIREHADKFGERQYRFKQGN------KELMLRFAACFGQFMMKKDMYILPKHLPLKL 321

Query: 363 AEFGSV-YRNEPSGSLHGLMRVRGFTQDDAHVFCTK--------EQMFNECLKI------ 407
            E  +  +R E  G L GL R+R FT  D H  C          E  F  CLK       
Sbjct: 322 YELSTYSFRYEQRGELVGLKRLRAFTMPDMHTVCYDIKQAMEEFENQFWMCLKTGDDLNT 381

Query: 408 -HNLIISIYKDFGFE--KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            +++I    KDF  E  +   K++   +++ G D + +        +L   K+    +++
Sbjct: 382 PYSIIFRYTKDFFDENKEWFFKIAKEYKEKYGKDVILE--------LLPKRKHYWVGKVD 433

Query: 465 TGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIH 524
             V+                D+ GR  +  T+Q+D     RFN   V+  +EK +P+++H
Sbjct: 434 MAVI----------------DSFGRPIENPTVQIDVESAKRFN-IVVHDGNEKIYPIILH 476

Query: 525 RAVFGSIERFIGIMIENFKGN--------LPLWLSPIQAIVTTITSSAVEYAQEIANLLK 576
            +  GS+ER +  ++E    +        LP+WLSPIQ  V  ++ +  +YA  IA  L+
Sbjct: 477 CSPTGSVERVLCGLLEKASMDAEAGAPPMLPVWLSPIQVRVIPVSDAHNDYALNIAKKLR 536

Query: 577 SHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
            +++ ++ D R E++  KIR      IP +++ GD+E     + I
Sbjct: 537 ENNIRVDYDDREESVGKKIRNAGKDWIPYVVVIGDEEVKNNILTI 581


>gi|307595064|ref|YP_003901381.1| Threonyl-tRNA synthetase editing domain-containing protein
           [Vulcanisaeta distributa DSM 14429]
 gi|307550265|gb|ADN50330.1| Threonyl-tRNA synthetase editing domain protein [Vulcanisaeta
           distributa DSM 14429]
          Length = 621

 Score =  104 bits (259), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 135/296 (45%), Gaps = 22/296 (7%)

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQ 399
           C    A+    + SYR++P+ + E    YR E  G      R+R F   D H+F    + 
Sbjct: 296 CFQQFAMIRDWVLSYRDIPIGMLEVADSYRYEQPGETVLCFRLRRFYMPDLHIFTRDLKN 355

Query: 400 MFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSS 459
                LK+H +I    +  G + + +   T+       D L + A+   K +L       
Sbjct: 356 AMEVALKLHEVIFREIRKLGRDYVSLYNVTKQFYDEHRDYLIELAKREGKPIL------- 408

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
                  V+  +  ++    E+ + D + R  +  T Q D     RF   Y + + E  +
Sbjct: 409 -----VRVMPEQKYYWVLNVEFHIVDELRRPREIATFQFDVGNAQRFGIKYRDENGEVKY 463

Query: 520 PVMIHRAVFGSIERFIGIMIENF-----KG---NLPLWLSPIQAIVTTITSSAVEYAQEI 571
           PV+IH A+ GS+ER+I  +++       +G    LP W+SP+Q  V  I+   + +A +I
Sbjct: 464 PVIIHTAIIGSVERYIYALLDTAAIAESRGEVPRLPTWVSPVQVRVIPISKEHLAFANDI 523

Query: 572 ANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS 626
           A+ L+   + ++ D R +ET+  ++R+     +P I++ GD+E     + +R  G+
Sbjct: 524 ASKLEDRMIRVDIDDRFDETLAKRVRDAETFWVPYIVVVGDREVKTGKLSVRVRGT 579


>gi|325969299|ref|YP_004245491.1| threonyl-tRNA synthetase [Vulcanisaeta moutnovskia 768-28]
 gi|323708502|gb|ADY01989.1| threonyl-tRNA synthetase [Vulcanisaeta moutnovskia 768-28]
          Length = 621

 Score =  103 bits (257), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 75/295 (25%), Positives = 134/295 (45%), Gaps = 22/295 (7%)

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQ 399
           C    A+    + SYR++P+ + E    YR E  G      R+R F   D H+F    + 
Sbjct: 296 CFQQFAMIKDWVLSYRDIPIGMLEVADSYRYEQPGETVLCFRLRRFYMPDLHIFTKDLKN 355

Query: 400 MFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSS 459
             +  LK+H +I    +  G + + +   T+       D L + A+   K +L       
Sbjct: 356 AMDVALKLHEIIFREVRKLGRDYVSLYNVTKQFYDEHRDYLIELAKREGKPML------- 408

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
                  ++  +  ++    E+ + D + R  +  T Q D     RF   Y + + E  +
Sbjct: 409 -----IRIMPEQKYYWVLNVEFHIVDELRRPREIATFQFDVGNAQRFGIKYRDENGEIRY 463

Query: 520 PVMIHRAVFGSIERFIGIMIENF-----KG---NLPLWLSPIQAIVTTITSSAVEYAQEI 571
           PV+IH A+ GS+ER+I  +++       KG    LP W+SPIQ  V  I+   + +A EI
Sbjct: 464 PVIIHTAIIGSVERYIYALLDTAAITESKGEIPRLPTWVSPIQVRVIPISKEHLTFANEI 523

Query: 572 ANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
            + L+   + ++ D R +ET+  ++R+     +P I++ GD+E     + +R  G
Sbjct: 524 VSRLEDRMIRVDIDDRFDETLAKRVRDAETFWVPYIVVIGDREVKTGKLSVRVRG 578


>gi|289472548|gb|ADC97459.1| putative threonyl-tRNA synthetase [Amblyomma cajennense]
          Length = 209

 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 69/200 (34%), Positives = 100/200 (50%), Gaps = 10/200 (5%)

Query: 3   SDIKLTFPDGSIKNFPVHA---TGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-S 58
           + I +T PDG  K  P  +   T   +A  IS+ LA   V   +N  + DL  P+ E  +
Sbjct: 7   APITVTLPDG--KQVPAESWKTTPYQIAAGISKGLADNVVIAKVNKVLWDLDRPLEEDCT 64

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQP-FSSD 117
           +E++  ED     V  HS AH++ EA++ ++    +  GP IE GFYYD   +Q   S+ 
Sbjct: 65  LELLKFEDKEGEQVFWHSSAHVLGEALERLYGGC-LCYGPPIEGGFYYDMHVDQGGVSAV 123

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +   IE  M+ I+    PF +  L  E    +F+     +KV IL+        T+Y  G
Sbjct: 124 DHPSIEGLMRNIVKERQPFERLELPKEDLLRMFQYN--PFKVRILQEKVQTPTTTVYGCG 181

Query: 178 EWFDLCRGPHVRSTGQVKKF 197
              DLCRGPHVR TG+VK  
Sbjct: 182 PLIDLCRGPHVRHTGKVKAL 201


>gi|257051518|ref|YP_003129351.1| threonyl-tRNA synthetase [Halorhabdus utahensis DSM 12940]
 gi|256690281|gb|ACV10618.1| threonyl-tRNA synthetase [Halorhabdus utahensis DSM 12940]
          Length = 620

 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 90/391 (23%), Positives = 166/391 (42%), Gaps = 28/391 (7%)

Query: 240 ESEKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           E E+  H  L +E  L    E    G + W+ +G  +   L+ Y+   + D     + TP
Sbjct: 202 EGEEPPHVDLMQEKGLVGYDELSDVGNLRWYPRGKLVRDALMEYVNDLVVDYGGMPVETP 261

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + D        H   +    +  +  D      R   L+   C G  ++      S  +
Sbjct: 262 IMYDLGARSIDEHAGKFGERQYRFESGD------RRMMLRFAACFGQFSIMRDMHISVND 315

Query: 358 LPVRLAEFGSV-YRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIY 415
           LP+R+ E  +  +R E  G + GL R+R FT  D H    + EQ   E  K   L +   
Sbjct: 316 LPLRVYEMSTYSFRREQRGEVTGLKRLRAFTMPDMHTATESMEQAREELRKQAELALQTS 375

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           +D         L+  P  R+  +  ++D E  ++ V+  +   S   I    +     ++
Sbjct: 376 EDL-------DLNYEPAIRMTRE-FYEDNEAWVEDVVAELGKPSLIEI----IPERHHYW 423

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
             K ++   D +GR  +  T+Q+D     RF+  Y +  ++  HP ++H +  G IER +
Sbjct: 424 SAKIDFAAIDGLGRPIENPTVQIDVESAERFDIEYTDG-TDSHHPPILHYSPSGGIERVL 482

Query: 536 GIMIENFKG----NLPLWLSPIQA-IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
             ++E+        LP WLSP Q   +     S ++Y + + + L+   +  + D R+E+
Sbjct: 483 AALLEDTASMDTPQLPTWLSPTQVRFIPVNPDSHLDYCEGLVDELEDADVRADIDDRDES 542

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGI 621
           +  +I +     +P  ++ GD+E    +IG+
Sbjct: 543 VGKRIAKAETDWVPYYVVVGDREIEGETIGV 573


>gi|330507458|ref|YP_004383886.1| threonyl-tRNA synthetase [Methanosaeta concilii GP-6]
 gi|328928266|gb|AEB68068.1| threonyl-tRNA synthetase [Methanosaeta concilii GP-6]
          Length = 621

 Score =  102 bits (253), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 96/385 (24%), Positives = 169/385 (43%), Gaps = 40/385 (10%)

Query: 246 HRKLAREMDLFHIAEDGS--GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           H +L R ++L    E GS  G + ++ KG  +   L + +  K  D    E+ TP + D 
Sbjct: 202 HVELMRRLELVDY-EPGSDSGNMRYYPKGRLVKSLLETLVLEKAADMGAMEVETPIMYDM 260

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
                  + D + A  + +        D R   L+   C G   + +    SY+ LP+++
Sbjct: 261 EHPTLKKYLDRFPARQYQIDS------DKRKLFLRFAACFGQFLMGHDMSISYKSLPLKM 314

Query: 363 AEFGSV-YRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGF 420
            E     +R E  G L G+ R+R FT  D H           E  K +   IS+ K+ G 
Sbjct: 315 IEMTRYSFRREQRGELVGIRRLRAFTMPDMHTMSRDMHSAIEEFRKQYLASISVLKEVGL 374

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL---GEGAFYGP 477
           E    +++ R  +       + + +  + G++D IK          VL+    E  FY  
Sbjct: 375 EVEDYEVAIRFTR-----DFYKENQEFIAGLVDIIKKP--------VLIEMWDERFFYFV 421

Query: 478 -KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
            KFE+   D + +     T+Q+D     R++  Y++    +  P+++H +  G+IER + 
Sbjct: 422 LKFEFNFVDTMDKASALSTVQIDVENAERYDINYIDESGARRRPILLHCSPSGAIERVMY 481

Query: 537 IMIE-----NFKGNLPL---WLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRN 588
            ++E     + +G LP+   WLSP Q  +  +     E A  +A +L       + D R+
Sbjct: 482 AILEKAARLSLQGKLPMLETWLSPTQVRIIPVAERHQERALALAGIL---GFRTDIDDRD 538

Query: 589 ETINYKIREHSIKKIPIIIICGDKE 613
           ET+  KIR+   + +P + + GD+E
Sbjct: 539 ETVGKKIRDAGREWVPYVAVIGDEE 563


>gi|110770771|ref|XP_001123266.1| PREDICTED: translation initiation factor IF-3-like, partial [Apis
           mellifera]
          Length = 283

 Score =  102 bits (253), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 42/97 (43%), Positives = 67/97 (69%)

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G+ PLWL+P+Q +V TI +    YA+E+  LLK+  + +E D RNE IN KIREHS++
Sbjct: 2   YAGHFPLWLAPVQVVVATIVNDVENYAREVVALLKAQGIRVELDDRNEKINAKIREHSLQ 61

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
            +P+I++ G KEA ER + +RR G  + + ++L +A+
Sbjct: 62  HVPVILVIGRKEAEERHLAVRRLGGKSQEIMALNEAM 98


>gi|213163803|ref|ZP_03349513.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E00-7866]
          Length = 118

 Score =  102 bits (253), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 43/114 (37%), Positives = 75/114 (65%), Gaps = 1/114 (0%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D SD +  + ++ IIT +
Sbjct: 4   ITLPDGSQRHYDHPVSPMDVALDIGPGLAKATIAGRVNGELVDASDLIENDATLSIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           D   L +IRHSCAH++  A++ +WP  ++AIGP++++GFYYD D ++  + +++
Sbjct: 64  DEEGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVVDNGFYYDVDLDRTLTQEDV 117


>gi|261880449|ref|ZP_06006876.1| threonine-tRNA ligase [Prevotella bergensis DSM 17361]
 gi|270332786|gb|EFA43572.1| threonine-tRNA ligase [Prevotella bergensis DSM 17361]
          Length = 136

 Score =  100 bits (250), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 51/134 (38%), Positives = 83/134 (61%), Gaps = 3/134 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           IK+TFPD S++ +    TG  +A+SIS +LA+  V+ AING+  +L+ P+ E  SI +  
Sbjct: 2   IKITFPDKSVREYEPGVTGFQIAQSISPALARDVVSCAINGETTELNRPINEDSSITLYK 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF--DKEQPFSSDELAQ 121
            +D        H+ AH++AEA++ ++P +Q   GP IE+GF+YD    + Q  S ++  +
Sbjct: 62  FDDDEGKHTFWHTSAHLLAEALKELYPGIQFGFGPAIENGFFYDVMPAEGQTISENDFPR 121

Query: 122 IEKKMQEIIARDSP 135
           IE KM+E+  +D P
Sbjct: 122 IEAKMRELAKKDEP 135


>gi|219851928|ref|YP_002466360.1| threonyl-tRNA synthetase [Methanosphaerula palustris E1-9c]
 gi|254783527|sp|B8GHN2|SYT_METPE RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|219546187|gb|ACL16637.1| threonyl-tRNA synthetase [Methanosphaerula palustris E1-9c]
          Length = 609

 Score =  100 bits (250), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 91/388 (23%), Positives = 159/388 (40%), Gaps = 28/388 (7%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK 322
           G + W  +G  +   L  Y+   + +     + TP + D        H D +    +  K
Sbjct: 214 GNLRWLPRGKIVRDLLADYVLHMVLEYGGSPVETPVMYDLGDKAIYEHADKFGERQYRFK 273

Query: 323 CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV-YRNEPSGSLHGLM 381
             +      R   L+   C G  ++      S   LP+++ E  +  +R+E  G + GL 
Sbjct: 274 SGN------RNMMLRFAACFGMFSIMRDMHISPNTLPIKMYELSTYSFRHEQRGEVIGLK 327

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLKIH-NLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           R+R FT  D H  C   +    C +    L     +DF  E + V   TR          
Sbjct: 328 RLRAFTMPDMHSLCLDMEGALHCFEEQLRLGWKSGEDFETELVGVFRCTR--------GF 379

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDF 500
           ++  EN +K ++      S+  +   +L     ++  K +    D  GR  +  T+Q+D 
Sbjct: 380 YEKYENWVKSIV----AESRVPMLIEILSDRVHYWIAKVDLAAIDGQGRPIENPTVQIDV 435

Query: 501 NLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAI 556
              +RF+  Y +   E  HP ++H +  GSIER I  ++EN        LP WL+P Q  
Sbjct: 436 ESSTRFDIKY-HLDGEVVHPPILHCSPTGSIERVICALLENTANQSVPQLPAWLAPTQVR 494

Query: 557 VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK--EA 614
           +  +      +A E+   L    +  + D R E++  K+RE  +  +P +I+ GD   E 
Sbjct: 495 LIPVAERHTSFADELCTRLNKAQIRTDLDDREESVGKKVREAGMDWVPYVIVIGDAEMET 554

Query: 615 SERSIGIRRFGSTTTQKVSLLDAIPILT 642
            + ++ IR+           LD   ++T
Sbjct: 555 GKLTVTIRKLSEPRVPHKEQLDVEELIT 582


>gi|121535634|ref|ZP_01667440.1| TGS domain protein [Thermosinus carboxydivorans Nor1]
 gi|121305804|gb|EAX46740.1| TGS domain protein [Thermosinus carboxydivorans Nor1]
          Length = 136

 Score =  100 bits (249), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 50/132 (37%), Positives = 82/132 (62%), Gaps = 5/132 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEI 61
           S +++   DG+I+      T   +AESISR LAK A+   ++G+V DL+  + +G  +E 
Sbjct: 2   SKLQIILKDGAIREVEPGTTLMQLAESISRGLAKSALVAKLDGQVVDLAYRLNKGGKVEF 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +T ED      +RHS +HI+A+AV+ ++ +V++ IGP I  GFYYDFD    F+ D+L  
Sbjct: 62  LTFEDEEGKGALRHSASHILAQAVKRLYGDVKLGIGPAIATGFYYDFDTTHTFTPDDL-- 119

Query: 122 IEKKMQEIIARD 133
             +K+Q++  +D
Sbjct: 120 --EKIQDVNGKD 129


>gi|56295619|emb|CAH04860.1| partial threonyl-tRNA synthetase (HrrS) [uncultured archaeon]
          Length = 478

 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 95/379 (25%), Positives = 170/379 (44%), Gaps = 36/379 (9%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKDDYE--EINTPQVL---DQHLWQQSGHWDSYRAN 317
           SG   ++ KG+ IFQ L  +      + ++  +I++P +    D  + +Q+G   ++   
Sbjct: 89  SGNFRFYPKGYLIFQLLHDWANEIAVNRFKALQIDSPLLYAWDDPQIREQAG---TFHER 145

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
            ++V+  D      R F L+     G   +      SYR LP+R+ EF   +R E SG L
Sbjct: 146 HYSVRPPDSD----REFILRFAGDFGLFKIMKDATISYRNLPLRMYEFSKSFRYERSGEL 201

Query: 378 HGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
            GL R+R F   D H FC   E+ + E  +++     +    G E  +V           
Sbjct: 202 SGLKRLRAFHMPDIHCFCRDMEEGWTEYQELYRNYSDLADASGVEYAIVFRIV------- 254

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
            ++ +++  +    ++D +K S+Q      VL     ++  K E+   D+     Q  T+
Sbjct: 255 -ESFYNENRS---RIVDLVKYSNQPAF-IEVLSEAKHYWAVKNEFQGVDSTRGCIQLSTV 309

Query: 497 QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF----KGNLPLWLSP 552
           Q+D      +   Y +   +K   ++ H ++ GSIER+   ++E      +  LP+WLSP
Sbjct: 310 QLDVKDAQVYGIDYTDRDGKKKGCIICHSSI-GSIERWYYSLLEEALKKEQPTLPVWLSP 368

Query: 553 IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
            Q  +  ++   +EY +     L    +  + D  +ET+  KI + S + IP + + GD+
Sbjct: 369 TQVRIIPVSEKQLEYCR----YLDIDGVRYDVDDSDETLAKKIAKASTEWIPYVAVVGDR 424

Query: 613 EASE--RSIGIRRFGSTTT 629
           EA     S+ IR  G   T
Sbjct: 425 EAESGVLSVSIRETGKRVT 443


>gi|126178716|ref|YP_001046681.1| threonyl-tRNA synthetase [Methanoculleus marisnigri JR1]
 gi|166225444|sp|A3CTJ9|SYT_METMJ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|125861510|gb|ABN56699.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Methanoculleus
           marisnigri JR1]
          Length = 611

 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 90/357 (25%), Positives = 149/357 (41%), Gaps = 31/357 (8%)

Query: 268 WHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADD 326
           W  +G  I   L  Y+  ++ D     + TP + D      + H   +    +  K  + 
Sbjct: 219 WMPRGKLIRDLLSDYVLTQVLDYGGMPVETPVMYDLGDAAIAEHAAKFGERQYRFKSGN- 277

Query: 327 TIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV-YRNEPSGSLHGLMRVRG 385
                R   L+   C G  ++ +    S   LP++L E  +  +R+E  G + GL R+R 
Sbjct: 278 -----RDMMLRFAACFGMFSIMHDMHISPNTLPMKLYELSTYSFRHEQKGEVIGLKRLRA 332

Query: 386 FTQDDAHVFCTKEQ----MFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALW 441
           FT  D H  C         F E L I        +D     + V   TR          +
Sbjct: 333 FTMPDMHTLCRDMDGALTAFEEQLAIG---WKTGEDLETPLVGVFRCTR--------DFF 381

Query: 442 DDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFN 501
           +  E  +KG++      S   +   VL     ++  K +    DA GR  +  T+Q+D  
Sbjct: 382 EQYELWVKGIV----AKSGVPMLIEVLSERTHYWIAKVDLAAIDAQGRPIENPTVQIDVE 437

Query: 502 LPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG----NLPLWLSPIQAIV 557
              RF+  Y      + HP ++H +  GSIER I  M+E        + P WL+P Q  +
Sbjct: 438 SADRFDIKYYAPDGTEVHPPILHCSPTGSIERVICAMLEGTAAQEVPSFPTWLAPTQVRL 497

Query: 558 TTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
             +    + +A+EI   L +  +  + D R+E++N KIRE  +  +P + + GD+EA
Sbjct: 498 VPVAERHICFAEEIDTRLNAAGIRADVDDRDESVNKKIREAGMDWVPYVAVIGDQEA 554


>gi|106364390|dbj|BAE95216.1| predicted threonyl-tRNA synthetase [unclutured Candidatus
           Nitrosocaldus sp.]
          Length = 685

 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 100/466 (21%), Positives = 190/466 (40%), Gaps = 94/466 (20%)

Query: 239 EESEKRDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINT 296
           E  E+  H +L + + +  H     +G + ++ KG  I   +  Y+ RK I+    E+ T
Sbjct: 211 EVDEEPPHVRLMKRLAIADHEPASDAGNLRFYPKGRLIKSLIEQYVTRKVIEYGAVEVET 270

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P + D      + +++ + A  + ++       + + F L+   C G   +      SY+
Sbjct: 271 PIMYDVEHPSLASYFNRFPARQYMIES------EGKEFFLRFAACFGQFLMAKDFTISYK 324

Query: 357 ELPVRLAEFGSV-YRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISI 414
            LP+++ E     +R E SG L GL R+R FT  D H  C   EQ   E LK   L   +
Sbjct: 325 HLPLKIYELTRYSFRREKSGELVGLRRLRAFTMPDCHALCRDIEQAKQEMLKRLELSKQV 384

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQ------DRINTGVL 468
            +  G                   +L DD E  ++   D    +         RI   VL
Sbjct: 385 IEGLGI------------------SLMDDVEVAIRVTSDFYNENRGFIAELVRRIGKPVL 426

Query: 469 LGEGA----FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIH 524
           L E +    ++  K+E+   D + +     T Q+D    +R+  ++V+    + +P+++H
Sbjct: 427 LEEWSERFFYFVLKWEFNFVDNLAKASALSTDQIDVENGARYGIYFVDEDGSRKNPIILH 486

Query: 525 RAVFGSIERFIGIMIENF-----KGN---LPLWLSPIQAIVTTITSSA------------ 564
            +  G++ER +  ++E       +G    LPLWLSP Q  +  +++              
Sbjct: 487 NSPSGAVERVMYALLEKAYRMQKEGKTPMLPLWLSPTQVRLIPVSTRGAVKGSSSSSNNN 546

Query: 565 ------------------------------------VEYAQEIANLLKSHHLSIETDFRN 588
                                               ++Y   I + L+   + ++ D R+
Sbjct: 547 NKDDGDGGRSGESSMGVEANSNSSSNSSNNVSSITYLDYCNSIMHRLERSSIRVDIDDRD 606

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           E++  +IRE  ++ IP I++ G+KE +   + +R   S   +++S+
Sbjct: 607 ESVGKRIREAEMEWIPYIVVVGEKEIASDRLSVRDRASGKVREMSV 652


>gi|45357977|ref|NP_987534.1| threonyl-tRNA synthetase [Methanococcus maripaludis S2]
 gi|73919806|sp|Q6M057|SYT_METMP RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|44920734|emb|CAF29970.1| Threonyl-tRNA synthetase [Methanococcus maripaludis S2]
          Length = 622

 Score = 98.2 bits (243), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 74/268 (27%), Positives = 121/268 (45%), Gaps = 19/268 (7%)

Query: 356 RELPVRLAEFGSV-YRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI-IS 413
           + LP+RL E  +  +R E  G L GL R+R FT  D H  C   +   E  +    + + 
Sbjct: 306 KHLPLRLYELSTYSFRYEQRGELVGLKRLRAFTMPDMHTVCMDMKQAMEAFEDQLWMGLK 365

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
              DF     ++        R   D   ++ E       +  +   +D I   +L G   
Sbjct: 366 TGDDFKTPYAIIF-------RFTQDFFDENKEWFFAMAKEYKQKYGKDAI-LEILSGRKH 417

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           ++  K +  + D+ GR  +  T+Q+D     RF    V+   +K HP+++H +  GS+ER
Sbjct: 418 YWVGKVDMAVVDSFGRPIENPTVQIDVESAERF-GIVVHDGDKKVHPIILHCSPTGSVER 476

Query: 534 FIGIMIENFKGN--------LPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD 585
            +  ++EN   N        LP WL+PIQA V  +     EYA E+ N L+S  +  + D
Sbjct: 477 VLCGLLENAYLNTLENKPPALPTWLTPIQARVIPVGDKHEEYALEVVNKLRSSGIRADFD 536

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKE 613
            R E++  KIR      +  +++ GD E
Sbjct: 537 DREESMGKKIRNAGTDWVNYVVVIGDSE 564


>gi|32307624|gb|AAP79217.1| threonyl-tRNA synthetase [Bigelowiella natans]
          Length = 147

 Score = 96.7 bits (239), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 41/113 (36%), Positives = 67/113 (59%)

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQ 569
           YV+   +K  P+M+HRA+FGSIERF GI++EN  G+ P+WLSP+Q  V  +T     + +
Sbjct: 4   YVSKDGKKERPIMVHRAIFGSIERFFGILVENTAGDFPVWLSPVQLKVLPVTDDFRPFCE 63

Query: 570 EIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           ++    K+  +  E D  ++ +   IR   ++KIP++ + G KE     + IR
Sbjct: 64  DVVKKAKALGIRAEIDSSDDRLGKMIRNAELEKIPVVAVVGQKEIDSNQLAIR 116


>gi|256092161|ref|XP_002581846.1| threonyl-tRNA synthetase [Schistosoma mansoni]
 gi|238668125|emb|CAZ38086.1| threonyl-tRNA synthetase, putative [Schistosoma mansoni]
          Length = 91

 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 41/77 (53%), Positives = 58/77 (75%)

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
           +TF LKPMNCPGH  ++   ++S++ELP+R A+FG ++RNE SG+L GL RVR F QDDA
Sbjct: 11  QTFGLKPMNCPGHCLMYAKEIRSHKELPLRFADFGVLHRNEFSGALSGLTRVRRFQQDDA 70

Query: 392 HVFCTKEQMFNECLKIH 408
           H+FC ++Q+ N    +H
Sbjct: 71  HIFCREDQVTNSFEIVH 87


>gi|262043501|ref|ZP_06016622.1| tetraacyldisaccharide 4'-kinase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259039164|gb|EEW40314.1| tetraacyldisaccharide 4'-kinase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 123

 Score = 95.5 bits (236), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 40/92 (43%), Positives = 60/92 (65%)

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
           +ERF GI++E++ G LP WLSP+QA+V TIT     YA+++   L+   L  E D RNE 
Sbjct: 1   LERFTGILLEHYVGKLPAWLSPVQAVVMTITDKQHHYAEQVLKALRKKGLRCEADLRNEK 60

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           I +KIRE ++ +IP ++I GD E +   + +R
Sbjct: 61  IGFKIREQTLARIPFLLIVGDAEENAARVTVR 92


>gi|150403333|ref|YP_001330627.1| threonyl-tRNA synthetase [Methanococcus maripaludis C7]
 gi|166223356|sp|A6VJ50|SYT_METM7 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|150034363|gb|ABR66476.1| threonyl-tRNA synthetase [Methanococcus maripaludis C7]
          Length = 622

 Score = 94.4 bits (233), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 86/362 (23%), Positives = 153/362 (42%), Gaps = 26/362 (7%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           +G   W+ KG  I   L  Y+   + +     + TP + D        H D +    +  
Sbjct: 218 AGHFRWYPKGKLIRDLLSDYVYNLVVERGGMPVETPVMYDLQNNAIREHADKFGERQYRF 277

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV-YRNEPSGSLHGL 380
           K  +   KDL    L+   C G   +        + +P++L E  +  +R E  G L GL
Sbjct: 278 KQGN---KDL---MLRFAACFGQFMMKKDMYLLPKHMPLKLYELSTYSFRYEQRGELVGL 331

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKIHNLI-ISIYKDFGFEKIMVKLSTRPEKRVGSDA 439
            R+R FT  D H  C   +   E  +    + +    DF     ++   T        + 
Sbjct: 332 KRLRAFTMPDMHTVCIDMKQAMEAFEDQLWMGLKTGDDFKTPYAIIFRFT--------ED 383

Query: 440 LWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVD 499
            +++ ++   G+    K          +L G   ++  K +  + D+ GR  +  T+Q+D
Sbjct: 384 FFEENKDWFFGMAKEYKQKYGKDAILEILPGRKHYWVGKVDMAVVDSFGRPIENPTVQID 443

Query: 500 FNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN--------LPLWLS 551
                RF    V+   +K HP+++H +  GS+ER +  ++EN   N        LP WL+
Sbjct: 444 VESAERF-GIVVHDGDKKVHPIILHCSPTGSVERVLCGLLENAYLNTLENKPPALPTWLT 502

Query: 552 PIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
           PIQA V  +     E+A E+AN L++  +  + D R +++  K+R      +  +++ GD
Sbjct: 503 PIQARVIPVGDKHEEFALEVANKLRASGIRADFDDREDSMGKKVRNAGTDWVNYVVVIGD 562

Query: 612 KE 613
            E
Sbjct: 563 NE 564


>gi|134046250|ref|YP_001097735.1| threonyl-tRNA synthetase [Methanococcus maripaludis C5]
 gi|166223355|sp|A4FZ87|SYT_METM5 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|132663875|gb|ABO35521.1| threonyl-tRNA synthetase [Methanococcus maripaludis C5]
          Length = 622

 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 88/373 (23%), Positives = 159/373 (42%), Gaps = 28/373 (7%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           +G   W+ KG  I   L  Y+    +++    + TP + D        H D +    +  
Sbjct: 218 AGHFRWYPKGKLIRDLLSDYVYNLVVENGGMPVETPVMYDLQNNAIREHADKFGERQYRF 277

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV-YRNEPSGSLHGL 380
           K  +   KDL    L+   C G   +        + +P++L E  +  +R E  G L GL
Sbjct: 278 KQGN---KDL---MLRFAACFGQFMMKKDMYLLPKHMPLKLYELSTYSFRYEQRGELVGL 331

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKIHNLI-ISIYKDFGFEKIMVKLSTRPEKRVGSDA 439
            R+R FT  D H  C   +   E  +    + +    DF     ++        R   D 
Sbjct: 332 KRLRAFTMPDMHTVCIDMKQAMEAFEDQLWMGLKTGDDFKTPYAIIF-------RFTEDF 384

Query: 440 LWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVD 499
             ++ E       +  +   +D I   +L G   ++  K +  + D+ GR  +  T+Q+D
Sbjct: 385 FEENKEWFFGMAKEYKQKYGKDAI-LEILPGRKHYWVGKVDMAVVDSFGRPIENPTVQID 443

Query: 500 FNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN--------LPLWLS 551
                RF    V+   +K  P+++H +  GS+ER +  ++EN   N        LP WL+
Sbjct: 444 VESAERF-GIVVHDGDKKVQPIILHCSPTGSVERVLCGLLENAYLNTLENKPPALPTWLT 502

Query: 552 PIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
           PIQA V  +     E+A E+A  L++  +  + D R +++  K+R      +  +++ GD
Sbjct: 503 PIQARVIPVGDKHAEFALEVATKLRASGIRADFDDREDSMGKKVRNAGTDWVNYVVVIGD 562

Query: 612 K--EASERSIGIR 622
              E+S+ ++ +R
Sbjct: 563 SEMESSKLTVTVR 575


>gi|291533302|emb|CBL06415.1| Threonyl-tRNA synthetase [Megamonas hypermegale ART12/1]
          Length = 133

 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 48/119 (40%), Positives = 77/119 (64%), Gaps = 3/119 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T  DG+++      T  D  +S S SLAKKA+A  I+G+  DL   +  +  +EI+T E
Sbjct: 4   ITLKDGAVREVAEGTTVLDFVKSFSNSLAKKALACKIDGETKDLMTVIDGDHQVEILTFE 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPE--VQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           D      +RHS +HI+A+AV+ ++ +  V++AIGP I++GFYYDFD +   S+++LA+I
Sbjct: 64  DEDGRWALRHSASHILAQAVKRLYGDKNVKLAIGPAIDNGFYYDFDMDHQLSTEDLAKI 122


>gi|218671001|ref|ZP_03520672.1| threonyl-tRNA synthetase [Rhizobium etli GR56]
          Length = 98

 Score = 92.4 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 41/73 (56%), Positives = 54/73 (73%)

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
           L++ETDFRNE INYKIREHS+ K+P+II+CG KEA ER++ IRR GS     + L  A+ 
Sbjct: 16  LNVETDFRNEKINYKIREHSVTKVPVIIVCGRKEAEERTVNIRRLGSQDQVSMGLDAAVE 75

Query: 640 ILTKESLPPDCQK 652
            LT E+ PPD ++
Sbjct: 76  SLTLEATPPDIRR 88


>gi|297850234|ref|XP_002892998.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297338840|gb|EFH69257.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 363

 Score = 92.0 bits (227), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 78/154 (50%), Gaps = 16/154 (10%)

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG 529
           G G FYGP  +  + DA+ ++ QCGT+Q+DF  P RF   Y +S  +             
Sbjct: 202 GNGKFYGPSIDVRISDAVKKNIQCGTLQLDFQQPDRFKLEYSSSAED------------- 248

Query: 530 SIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE 589
             E F  I++E+++G  P WLSP QAIV +++     YA+++ + +      ++ D    
Sbjct: 249 --EMFF-ILLEHYEGKWPFWLSPHQAIVCSLSEKHRSYAEKVRDQIHEARYYVDVDISGR 305

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRR 623
            I  K+RE    +   I+  GD EA+   + +RR
Sbjct: 306 KIEEKVREAQAAQYNYILAVGDFEAATGQVSVRR 339



 Score = 67.8 bits (164), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 65/122 (53%), Gaps = 7/122 (5%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEIN 295
           + E++ + DH  L ++ +LF   E   G  F+     +++  L+++++++  K  Y E+ 
Sbjct: 72  YTEDARQCDHILLGQQQELFFCHELSPGSWFFLPHATRVYNKLMAFIKKEYWKRGYTEVM 131

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           +P + +  LW+ SGH  + + NMF          D + F LK +NCPGH  +F   ++S 
Sbjct: 132 SPNMYNMKLWETSGHAANEKENMFTFDV------DKQEFGLKHVNCPGHCLLFQQRVRSC 185

Query: 356 RE 357
           RE
Sbjct: 186 RE 187


>gi|168704391|ref|ZP_02736668.1| threonyl-tRNA synthetase [Gemmata obscuriglobus UQM 2246]
          Length = 142

 Score = 90.5 bits (223), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 72/126 (57%), Gaps = 7/126 (5%)

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
             L+PM CP H+ V+    +SYR+LP+R+AE G++YR E SG + GL RVR  T +DAH+
Sbjct: 11  LCLRPMCCPHHIQVYKSKARSYRDLPIRIAELGNMYRFERSGVVGGLSRVRCMTLNDAHL 70

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP-------EKRVGSDALWDDAEN 446
           F   +Q+ +E   +  L+   Y D G  +   +LS          +K V + A+W+ +  
Sbjct: 71  FVRPDQVKHEIAGVLQLMKKAYADLGITEYRFRLSKNADPDGPPSDKYVDNPAMWESSTK 130

Query: 447 IMKGVL 452
           +++ VL
Sbjct: 131 MLREVL 136


>gi|282162921|ref|YP_003355306.1| truncated threonyl-tRNA synthetase [Methanocella paludicola SANAE]
 gi|282155235|dbj|BAI60323.1| truncated threonyl-tRNA synthetase [Methanocella paludicola SANAE]
          Length = 477

 Score = 90.5 bits (223), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 94/376 (25%), Positives = 166/376 (44%), Gaps = 29/376 (7%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKDDYE--EINTPQVLDQHLWQQSGHWDSYRANMFA 320
           SG   ++ KG+ IF+ L  +      + ++  ++++P + D    Q      ++    + 
Sbjct: 87  SGNFRFYPKGYLIFELLRDWAYDIAINRFKAIQVDSPLLFDWDDPQIKEQAGTFHERHYT 146

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           VK  D   KD   F L+     G   +      SYR LP+R+ EF   +R E  G L GL
Sbjct: 147 VKAPDHPEKD---FILRFAGDFGLFKIMKDATISYRNLPLRMYEFSKSFRYERDGELSGL 203

Query: 381 MRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDA 439
            R+R F   D H FC   ++ +NE  +++     +    G E  +V       + V S  
Sbjct: 204 KRLRAFHMPDIHCFCRDIDEGWNEYQELYRNYADLCDASGVEYAVVF------RIVDSFY 257

Query: 440 LWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVD 499
           L + +      + D +K S+       VL     ++  K E+   D+     Q  T+Q+D
Sbjct: 258 LQNKSR-----IADLVKYSNTPAF-VEVLSDMKHYWAVKNEFQGVDSTRSCIQLSTVQLD 311

Query: 500 FNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER-FIGIMIENFK---GNLPLWLSPIQA 555
               + +   Y +S  +K   ++ H ++ GSIER +  I+ E  K     LP WLSP Q 
Sbjct: 312 VKDAAVYGIDYTDSDGKKKGCIICHSSI-GSIERWYYSILEEALKHETPTLPAWLSPTQV 370

Query: 556 IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEAS 615
            +  ++   + Y +     L    + ++ D  ++T++ KI   S++ +P + + GDKE  
Sbjct: 371 RIIPVSEKQLNYCK----YLDIDGVRVDVDDSDDTLSKKIARASMEWVPYVAVVGDKEVE 426

Query: 616 ER--SIGIRRFGSTTT 629
               S+ IR+ G   +
Sbjct: 427 SGLFSVSIRQSGKRVS 442


>gi|315123805|ref|YP_004065809.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|315017527|gb|ADT65620.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
          Length = 134

 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 47/120 (39%), Positives = 73/120 (60%), Gaps = 2/120 (1%)

Query: 34  LAKKAVAVAINGKVCDLSDPVREGSI-EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEV 92
           + K+ +A   N  + D S  V+  ++ EI       SL VIRHSCAH+MA+A++S++PE 
Sbjct: 1   MEKEVIAYLDNETIID-SQSVKNTNLKEIYFDNSKESLEVIRHSCAHLMAQAIKSLYPEA 59

Query: 93  QVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFES 152
           +  +GP+IEDGFYYDF  E     ++L +IEKKM+E+       LK  ++  +A   F++
Sbjct: 60  KFFVGPVIEDGFYYDFRVESKIGEEDLVKIEKKMKELAEAKIEILKYEITKNEALAKFQN 119


>gi|328476615|gb|EGF47114.1| threonyl-tRNA synthetase [Lactobacillus rhamnosus MTCC 5462]
          Length = 111

 Score = 89.7 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 44/104 (42%), Positives = 60/104 (57%), Gaps = 1/104 (0%)

Query: 500 FNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTT 559
           F LP RF   YV    E+  PVMIHR + G++ERFI  + E +KG  P WL+P+QA +  
Sbjct: 1   FMLPDRFGLTYVGKDGEEHRPVMIHRGIVGTMERFIAYLTEIYKGAFPTWLAPVQAEIIP 60

Query: 560 ITSSAV-EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
           + + A  EYA+++   L      +E D RNE + YKIRE    K
Sbjct: 61  VNNEAHGEYAEKVRAELAKRGFRVEVDDRNEKMGYKIRESQNSK 104


>gi|309805216|ref|ZP_07699268.1| TGS domain protein [Lactobacillus iners LactinV 09V1-c]
 gi|308165450|gb|EFO67681.1| TGS domain protein [Lactobacillus iners LactinV 09V1-c]
          Length = 179

 Score = 89.4 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 58/177 (32%), Positives = 94/177 (53%), Gaps = 5/177 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS K F    T  +VA SI+ SLAK AVA  +N ++  L   V  +  + IIT +
Sbjct: 5   ITLPDGSKKEFNHALTIKEVASSIATSLAKSAVAGKVNDEIRPLDFVVDTDARVAIITDK 64

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L V+R++ A +        +P V++    + EDGF+ D DKE    + EL  +EK+
Sbjct: 65  DEEGLQVLRNTAAFVFEMVASKQYPSVRLGTSELEEDGFFVDTDKEDQIKASELPDLEKE 124

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           MQ+I+        + +S  +  +LF  K + YK+E+L+     + V +Y+  ++ D 
Sbjct: 125 MQKIVKNGEKIEYKIVSKSELLDLF--KDDPYKLELLKE--EADEVAVYKLEDFVDF 177


>gi|297620157|ref|YP_003708262.1| threonyl-tRNA synthetase [Methanococcus voltae A3]
 gi|297379134|gb|ADI37289.1| threonyl-tRNA synthetase [Methanococcus voltae A3]
          Length = 629

 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/278 (22%), Positives = 124/278 (44%), Gaps = 30/278 (10%)

Query: 369 YRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLS 428
           +R E  G L GL R+R FT  D H  C   +   +  +              E+  + L 
Sbjct: 327 FRYEQRGELVGLKRLRAFTMPDMHTVCMDMEQAKQAFE--------------EQFWMGLQ 372

Query: 429 TRPEKRVG-------SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
           T  + +         +   +D+ ++ +  ++   +   +  +   +L     ++  K + 
Sbjct: 373 TGDDLKTPYSIIFRFTQDFYDEHKDWLYNIITEYRAKYEKDVVLEILPARKHYWIGKVDM 432

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            + D+ GR  +  T+Q+D     RF+   VN   +K +P+++H +  GS+ER +  ++E 
Sbjct: 433 AVVDSFGRPIENPTVQIDVESAKRFD-ITVNDGDKKINPIILHCSPTGSVERVLCGLLEG 491

Query: 542 FKGN--------LPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
              N        LP WL+PIQ  V  ++    EYA  +A  L+++ +  + D R E+I  
Sbjct: 492 AYLNTLEEVPPMLPTWLAPIQVRVIPVSDKHQEYALSVAEKLRANGIRADYDDREESIGK 551

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
           KIR         +++ GD+E  + ++ +     ++T+K
Sbjct: 552 KIRNAGKDWSMYVVVIGDEEMEKGNLNVTVRAKSSTKK 589


>gi|159904883|ref|YP_001548545.1| threonyl-tRNA synthetase [Methanococcus maripaludis C6]
 gi|238686928|sp|A9A6L7|SYT_METM6 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|159886376|gb|ABX01313.1| threonyl-tRNA synthetase [Methanococcus maripaludis C6]
          Length = 622

 Score = 88.6 bits (218), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 84/362 (23%), Positives = 151/362 (41%), Gaps = 26/362 (7%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           +G   W+ KG  I   L  Y+   + +     + TP + D        H D +    +  
Sbjct: 218 AGHFRWYPKGKLIRDLLSDYVYNLVVERGGMPVETPVMYDLQNNAIREHADKFGERQYRF 277

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV-YRNEPSGSLHGL 380
           K  +   KDL    L+   C G   +        + +P++L E  +  +R E  G L GL
Sbjct: 278 KQGN---KDL---MLRFAACFGQFMMKKDMYLLPKHMPLKLYELSTYSFRYEQRGELVGL 331

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKIHNLI-ISIYKDFGFEKIMVKLSTRPEKRVGSDA 439
            R+R FT  D H  C   +   E  +    + +    DF     ++        R   D 
Sbjct: 332 KRLRAFTMPDMHTVCIDMKQAMEAFEDQLWMGLKTGDDFKTPYAIIF-------RFTEDF 384

Query: 440 LWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVD 499
             ++ E       +  +   +D I   +L G   ++  K +  + D+ GR  +  T+Q+D
Sbjct: 385 FEENKEWFFGMAKEYKQKYGKDAI-LEILPGRKHYWVGKVDMAVVDSFGRPIENPTVQID 443

Query: 500 FNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN--------LPLWLS 551
                RF    V+   +K HP+++H +  GS+ER +  ++EN   N        LP WL+
Sbjct: 444 VESAERF-GIVVHDGDKKVHPIILHCSPTGSVERVLCGLLENAYLNTLENRPPALPTWLT 502

Query: 552 PIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
           P+QA V  +      +A ++A  L++  +  + D R +++  K+R      +  +++ GD
Sbjct: 503 PVQARVIPVGDKHSAFALDVATKLRASGIRADFDDREDSMGKKVRNAGTDWVNYVVVIGD 562

Query: 612 KE 613
            E
Sbjct: 563 SE 564


>gi|150400144|ref|YP_001323911.1| threonyl-tRNA synthetase [Methanococcus vannielii SB]
 gi|166225461|sp|A6US27|SYT_METVS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|150012847|gb|ABR55299.1| threonyl-tRNA synthetase [Methanococcus vannielii SB]
          Length = 622

 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/278 (24%), Positives = 118/278 (42%), Gaps = 50/278 (17%)

Query: 369 YRNEPSGSLHGLMRVRGFTQDDAHVFCTK--------EQMFNECLKI-------HNLIIS 413
           +R E  G L GL R+RGFT  D H  C          E  F   LK        +++I  
Sbjct: 320 FRYEQRGELVGLKRLRGFTMPDMHTVCIDMNQAMEAFENQFWMGLKTGDDFKTPYSIIFR 379

Query: 414 IYKDFGFE--KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
              +F  E  +   K++   + + G DA+ +                        +L G 
Sbjct: 380 FTNEFFEENKEWFFKMAKEYKLKYGKDAILE------------------------ILPGR 415

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
             ++  K +  + D+ GR  +  T+Q+D     RF    V+   +  HP+++H +  GSI
Sbjct: 416 KHYWVGKVDMAVVDSFGRPIENPTVQIDVESAQRF-GITVHDGDKTIHPIILHCSPTGSI 474

Query: 532 ERFIGIMIENF--------KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIE 583
           ER +  ++EN            LP WL+PIQA V  ++    E+A E+ N L+   +  +
Sbjct: 475 ERVLCGLLENAYIKTLEDKPPALPTWLTPIQARVIPVSERNEEFALEVVNKLRESGIRTD 534

Query: 584 TDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
            D R +++  KIR      +  +++ GD E   + + +
Sbjct: 535 FDDREDSMGKKIRNAGTDWVNYVVVIGDNEMESKKLTV 572


>gi|46143183|ref|ZP_00135707.2| COG0441: Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
          Length = 85

 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 45/86 (52%), Positives = 56/86 (65%), Gaps = 2/86 (2%)

Query: 141 LSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFK 199
           +S ++AR+ FE + E YK+ IL E+I       LY   E+ D+CRGPHV +  +    FK
Sbjct: 1   MSWQEARDTFEKRGEPYKMAILDENIERTATPALYHHEEYIDMCRGPHVPNM-RFCHHFK 59

Query: 200 LMKVAGAYWRGDSNRPMLSRIYGTAW 225
           L KVAGAYWRGDS   ML RIYGTAW
Sbjct: 60  LQKVAGAYWRGDSKNKMLQRIYGTAW 85


>gi|33322975|gb|AAQ07224.1|AF496532_1 threonyl-tRNA synthetase 1 [Lactobacillus delbrueckii subsp.
           lactis]
          Length = 123

 Score = 86.3 bits (212), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 45/128 (35%), Positives = 70/128 (54%), Gaps = 10/128 (7%)

Query: 410 LIISIYKDFGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
           +I+ +Y DF       +LS R     +K   +D +W+ +++++K  +D +     D +  
Sbjct: 2   IIMDVYHDFDINDYYFRLSYRDPKNTDKYFANDEMWERSQSMLKAAMDDM---GLDYVEA 58

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
               GE AFYGPK +   K A+G D    TIQ+DF LP RF   Y+ +  E+  PVMIHR
Sbjct: 59  E---GEAAFYGPKLDIQTKTALGNDETMSTIQLDFMLPERFELSYIGADGEEXRPVMIHR 115

Query: 526 AVFGSIER 533
            + G++ER
Sbjct: 116 GIVGTMER 123


>gi|213619333|ref|ZP_03373159.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-2068]
          Length = 115

 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 36/103 (34%), Positives = 59/103 (57%)

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           F G  P WL+P+Q +V  IT S  EY  E+   L++  + ++ D RNE I +KIREH+++
Sbjct: 2   FAGFFPTWLAPVQVVVMNITDSQSEYVNELTQKLQNAGIRVKADLRNEKIGFKIREHTLR 61

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           ++P +++CGDKE     + +R         + + D I  L +E
Sbjct: 62  RVPYMLVCGDKEVEAGKVAVRTRRGKDLGSLDVNDVIEKLQQE 104


>gi|298711240|emb|CBJ32460.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 147

 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/104 (36%), Positives = 64/104 (61%)

Query: 522 MIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLS 581
           M+HRA+FGS+ERF GI++EN  G  PLWL+P Q  +  +T  A +Y  E+ +  K   L 
Sbjct: 1   MLHRAIFGSLERFFGILVENTAGTFPLWLAPEQMRLLPVTDVARDYCLEVQSKFKKAGLR 60

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
           ++ D  +E +  +IR    ++IP++ + G+KE +  ++ +R  G
Sbjct: 61  VKVDRGSERLAKQIRTAEKERIPVMSVVGEKEVAAGTLAVRSRG 104


>gi|88602298|ref|YP_502476.1| threonyl-tRNA synthetase [Methanospirillum hungatei JF-1]
 gi|121729157|sp|Q2FPK3|SYT_METHJ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|88187760|gb|ABD40757.1| Ser-tRNA(Thr) hydrolase [Methanospirillum hungatei JF-1]
          Length = 610

 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 86/367 (23%), Positives = 156/367 (42%), Gaps = 29/367 (7%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKDDY--EEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           G + W  +G K+ + L++     +  DY    + TP + D        H D +    +  
Sbjct: 214 GHLRWLPRG-KLVRDLLADYALSLVLDYGASPVETPVMYDLADKAIFEHADKFGERQYRF 272

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV-YRNEPSGSLHGL 380
           K  +      R   L+   C G          S   LP+++ E  +  +R+E  G + GL
Sbjct: 273 KSGN------RNMMLRFAACFGMFTTMRSMHISPNHLPMKMYELSTYSFRHEQKGEVIGL 326

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS--IYKDFGFEKIMVKLSTRPEKRVGSD 438
            R+R FT  D H  C   +    C +   L I     +DFG + + V   T        +
Sbjct: 327 KRLRAFTMPDMHSLCKDLENALTCFE-EQLAIGWKTGRDFGTQLVAVFRCT--------E 377

Query: 439 ALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
             + + E  +K +   +K+S    I    L     ++  K +    D   R  +  T+Q+
Sbjct: 378 EFYSEYEGWIKKI---VKDSGVP-ILIETLSDRVHYWIAKIDLAAIDGQNRPIENPTVQI 433

Query: 499 DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK----GNLPLWLSPIQ 554
           D     RF   Y  +   + +P ++H +  GS+ER    ++EN       +LP WL+P Q
Sbjct: 434 DVESSKRFGIKYHLADGTEVYPPILHCSPTGSVERVFCAILENTVNQKVAHLPTWLTPTQ 493

Query: 555 AIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
             +  +T + + YA++IA  L    +  + D R++++N KIR   +  +  +I+ GD E 
Sbjct: 494 VRIIPVTDNHLGYAKDIAEKLTKARIRADIDDRDDSLNKKIRAAGMDWVSYVIVVGDSEM 553

Query: 615 SERSIGI 621
           +  ++ +
Sbjct: 554 NSGNLTV 560


>gi|182414055|ref|YP_001819121.1| phosphoribulokinase/uridine kinase [Opitutus terrae PB90-1]
 gi|177841269|gb|ACB75521.1| phosphoribulokinase/uridine kinase [Opitutus terrae PB90-1]
          Length = 567

 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 102/206 (49%), Gaps = 4/206 (1%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           +I++  PDG     P  AT + +   I+  L    V V +NG++ DL+  +  E  +  +
Sbjct: 12  EIEVHLPDGRTLRGPRGATAAVLLAPIADDLPAPLVGVVVNGELFDLAHAIDLEARVRPV 71

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYY-DFDKEQPFSSDELAQ 121
           T  D     + R S  +++  A   ++PE  + I   +  G Y+ +     P +S ELA 
Sbjct: 72  TMADADGARIYRRSLTYLLDYAFSRLYPEATLLIDHSLASGGYFCNIRGRAPLTSAELAA 131

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +E  M+ I+  + PF +  ++  +A   F+ +K+A K  ++     K  +TLY+ GE FD
Sbjct: 132 LEADMRRIVGENLPFNRHEVTLAEAIAHFDRQKQADKSRLMRH-RRKPTITLYQLGERFD 190

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAY 207
              G  V STG + K+F ++ + G +
Sbjct: 191 DRHGYMVPSTGYL-KWFDVVAINGGF 215


>gi|46143184|ref|ZP_00135708.2| COG0441: Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
          Length = 95

 Score = 84.3 bits (207), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 34/74 (45%), Positives = 55/74 (74%)

Query: 56  EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFS 115
           + S+EIIT +D   L +IRHSCAH++  A++ ++P V++AIGP I++GFYYD D ++  +
Sbjct: 16  DSSLEIITAKDEDGLEIIRHSCAHLLGHAIKQLFPNVKMAIGPTIDNGFYYDVDLDRSLT 75

Query: 116 SDELAQIEKKMQEI 129
            ++L  IEK+M E+
Sbjct: 76  QEDLDAIEKRMLEL 89


>gi|207109770|ref|ZP_03243932.1| threonyl-tRNA synthetase [Helicobacter pylori HPKX_438_CA4C1]
          Length = 145

 Score = 84.0 bits (206), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 66/117 (56%)

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAV 565
           F   + N  +    PVMIHRA+ GS ERFI I+ E+F GN P +++P Q  +  I     
Sbjct: 1   FKLAFTNERNHAEQPVMIHRAILGSFERFIAILSEHFGGNFPFFVAPTQIALIPINEEHH 60

Query: 566 EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
            +A ++   LK   + +E   +N+++N K+R    +KIP+I++ G++E     + IR
Sbjct: 61  VFALKLKEALKKRDIFVEVLDKNDSLNKKVRLAEKQKIPMILVLGNEEMETEILSIR 117


>gi|296110107|ref|YP_003617056.1| threonyl-tRNA synthetase [Methanocaldococcus infernus ME]
 gi|295434921|gb|ADG14092.1| threonyl-tRNA synthetase [Methanocaldococcus infernus ME]
          Length = 610

 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 69/256 (26%), Positives = 115/256 (44%), Gaps = 47/256 (18%)

Query: 369 YRNEPSGSLHGLMRVRGFTQDDAHVFCTK--------EQMFNECLKI-HNLIISIYKDFG 419
           +R E SG L GL R+R FT  D H  C          E+ F  CLK   +L +  Y  F 
Sbjct: 315 FRYEQSGELVGLKRLRAFTMPDMHTVCLNLEQAMEEFEKQFWMCLKTGEDLELDYYVIFR 374

Query: 420 FEK--------IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
           F K          ++++   ++R   D L +        +L   K+    +++  V+   
Sbjct: 375 FTKDFFEEHKDWFLRMAKEYKERYNKDLLLE--------ILPKRKHYWVGKVDIAVI--- 423

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK-CHPVMIHRAVFGS 530
                        D++GR  +  T+Q+D     RF+   +  H++K  +P+++H +  GS
Sbjct: 424 -------------DSLGRPIENPTVQIDVESSKRFD---IKVHADKEIYPIILHCSPTGS 467

Query: 531 IERFIGIMIENFKG--NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRN 588
           IER I  ++E        P+WLSPIQ  V +++    EYA+ I   L  +++  + D R+
Sbjct: 468 IERVICALLERDMELPYFPIWLSPIQVRVISVSEKYNEYAENIVKELIKNNIRADLDDRD 527

Query: 589 ETINYKIREHSIKKIP 604
             +  KIRE     +P
Sbjct: 528 LRVGKKIREAGKDWVP 543


>gi|83592514|ref|YP_426266.1| anticodon-binding [Rhodospirillum rubrum ATCC 11170]
 gi|83575428|gb|ABC21979.1| Anticodon-binding [Rhodospirillum rubrum ATCC 11170]
          Length = 387

 Score = 82.0 bits (201), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 89/385 (23%), Positives = 143/385 (37%), Gaps = 67/385 (17%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RD   L    +LF     G G  +W  +G  + + +   +R  ++   Y EI TP ++D 
Sbjct: 22  RDPVALGESQELFLWRATGGGNPYWLPRGLTLLRVIEGGLRAWLEAAGYAEIRTPPLVDG 81

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE-LPVR 361
                                           A +   C  H  V  H L    E  P+R
Sbjct: 82  --------------------------------AFRGGTCAAHRLV--HALARRAEDGPLR 107

Query: 362 LAEFGSVYRNEPSGSLHGLMRVR------GFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           L E G  +R  P   L G            FT D+AHVFC  +    E  +I     +  
Sbjct: 108 LFELGVCHRGGPGEGLLGGAAFTPPAVGTAFTTDEAHVFCPADHCVAEVARIVTASAATL 167

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
             FGF  I V+  T    R G +        +  G     +   Q  +  G   GEGA  
Sbjct: 168 AAFGFPVIGVRWGT---ARAGEEC------PLAAGAR---RAGYQPGLAAGP-AGEGAPT 214

Query: 476 GPKF-EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           G  +  + + D  G  W CG + ++           +    E+   ++ HR +FGS+E  
Sbjct: 215 GGSWLVFEVDDGAGGAWPCGGLTLEGE--------AIGGAGERAI-LLCHR-LFGSLEAA 264

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
           +G+++    G L  WL+P Q ++   T++     + IA       L +  D   E++  K
Sbjct: 265 VGLLLARGDGWLAPWLAPQQVLLAG-TAAEEAIVRSIAGRFAEAGLRVGADLGAESLGVK 323

Query: 595 IREHSIKKIPIIIICGDKEASERSI 619
                   IP++   G +EA  +++
Sbjct: 324 RARARALGIPVVASLGPREAFSKTV 348


>gi|255658001|ref|ZP_05403410.1| phosphoribulokinase family protein [Mitsuokella multacida DSM
           20544]
 gi|260850203|gb|EEX70210.1| phosphoribulokinase family protein [Mitsuokella multacida DSM
           20544]
          Length = 555

 Score = 81.3 bits (199), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 52/175 (29%), Positives = 90/175 (51%), Gaps = 3/175 (1%)

Query: 25  DVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIRHSCAHIMAE 83
           D+A    +  A + VAV ++  + DL  PV +  SIE +  E      + R S   ++  
Sbjct: 19  DLAADYQQEYASRIVAVKLDNTLHDLQTPVGKSRSIEFVELESEEGWIIYRRSVEFLLVM 78

Query: 84  AVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ-IEKKMQEIIARDSPFLKQYLS 142
           AV  ++PE +VA      +G Y +        ++ +AQ IE +M+ I+  D P +K+ L 
Sbjct: 79  AVHELYPEAEVAAMFRANNGLYCEISVPGKKLTEAMAQAIEAEMRRIVEEDRPIVKEVLE 138

Query: 143 HEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
            E A +LF+  K+  K  ++ S+   + V++YR G+++D   G  + STG + KF
Sbjct: 139 REAAVKLFKETKQVEKANLIASLKLPK-VSIYRCGDYYDYLYGAMIGSTGHLGKF 192


>gi|15220974|ref|NP_173251.1| tRNA synthetase-related / tRNA ligase-related [Arabidopsis
           thaliana]
 gi|332191556|gb|AEE29677.1| class II aaRS and biotin synthetase domain-containing protein
           [Arabidopsis thaliana]
          Length = 165

 Score = 80.9 bits (198), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 39/118 (33%), Positives = 64/118 (54%), Gaps = 1/118 (0%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCH-PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI 556
           VDF+L  RF   Y   +       V+IHRAV  S+ER   I++E +KG  P WLSP QAI
Sbjct: 17  VDFHLRDRFKLEYSAENETMIERSVLIHRAVLSSVERLFAILLEQYKGKFPFWLSPRQAI 76

Query: 557 VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
           V +++     YA ++ + +      ++ D  +  ++ K++E  +     I++ GD+EA
Sbjct: 77  VCSVSEDYRSYADKVRDQIHEAGYYVDVDTTDRNVSDKVQEAQVAHYNYILVVGDEEA 134


>gi|118444126|ref|YP_877464.1| phosphoribulokinase family protein [Clostridium novyi NT]
 gi|118134582|gb|ABK61626.1| phosphoribulokinase family protein [Clostridium novyi NT]
          Length = 552

 Score = 80.9 bits (198), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 86/168 (51%), Gaps = 2/168 (1%)

Query: 44  NGKVCDLSDPVRE-GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIED 102
           NGK+ +L+  V E G+ EI+ P+   S+     +   I+ ++V+ ++P V+V I   +  
Sbjct: 43  NGKIYELNHKVYEDGNFEIVDPKRKISVLAYMRTLQFILIKSVRDLYPGVKVRIEHSLSK 102

Query: 103 GFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL 162
           G + +  KE P + +++  I+ +MQEII +D    K  +  EKA E+F+      K+ + 
Sbjct: 103 GIFGEVSKETPLTQEDVKNIKNRMQEIIDKDIVIHKLSVPKEKAIEIFKEYDMDAKLRMF 162

Query: 163 ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRG 210
             +  K NVTLY     +D   GP   STG V+ F  +    G   RG
Sbjct: 163 AHVDNK-NVTLYELDGMYDYFYGPMAYSTGHVRLFDLMYYEPGFILRG 209


>gi|33322995|gb|AAQ07234.1|AF496542_1 threonyl-tRNA synthetase 1 [Lactobacillus delbrueckii subsp.
           lactis]
          Length = 107

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 37/108 (34%), Positives = 61/108 (56%), Gaps = 5/108 (4%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK 322
           G+ +W  KG  I + +  Y   K +      + TP +++   ++ SGHWD YR +MF   
Sbjct: 1   GLPYWMPKGATIRRIIERYXXDKEVAAGXXHVYTPVLMNLDAYKTSGHWDHYREDMFPPM 60

Query: 323 CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYR 370
                + +     L+PMNCP H+ ++ H ++SYRELP+R+AE G ++R
Sbjct: 61  ----DMGEGEMLELRPMNCPSHIQIYKHHIRSYRELPIRIAELGMMHR 104


>gi|8671766|gb|AAF78372.1|AC069551_5 T10O22.10 [Arabidopsis thaliana]
          Length = 270

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 39/118 (33%), Positives = 64/118 (54%), Gaps = 1/118 (0%)

Query: 498 VDFNLPSRFNAFYVNSHSEKC-HPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI 556
           VDF+L  RF   Y   +       V+IHRAV  S+ER   I++E +KG  P WLSP QAI
Sbjct: 122 VDFHLRDRFKLEYSAENETMIERSVLIHRAVLSSVERLFAILLEQYKGKFPFWLSPRQAI 181

Query: 557 VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
           V +++     YA ++ + +      ++ D  +  ++ K++E  +     I++ GD+EA
Sbjct: 182 VCSVSEDYRSYADKVRDQIHEAGYYVDVDTTDRNVSDKVQEAQVAHYNYILVVGDEEA 239


>gi|256069251|ref|XP_002571081.1| threonyl-tRNA synthetase [Schistosoma mansoni]
 gi|238652067|emb|CAZ38766.1| threonyl-tRNA synthetase, putative [Schistosoma mansoni]
          Length = 155

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/148 (35%), Positives = 68/148 (45%), Gaps = 39/148 (26%)

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           +Y  FGF    + LSTRPEK +G   +WD AE  +K  LD +       +   +  G+GA
Sbjct: 15  VYGVFGF-SFELYLSTRPEKYMGEIEMWDRAEKQLKESLDEVG------LKWELNPGDGA 67

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV---------------------- 511
           FYGPK +  + DA+ R  QC TIQ+DF LP RFN  Y                       
Sbjct: 68  FYGPKIDINIMDALRRRHQCATIQLDFQLPVRFNLSYASETDNPSGSDNNCNNVSNTTNA 127

Query: 512 --NSHSEKCH--------PVMIHRAVFG 529
             N H    H        PV+IHRA+ G
Sbjct: 128 ISNHHEPTNHQTDLNTHRPVIIHRAILG 155


>gi|220673116|emb|CAX14534.1| novel protein similar to vertebrate threonyl-tRNA synthetase (Tars)
           [Danio rerio]
          Length = 145

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 1/121 (0%)

Query: 519 HPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSH 578
            PV+IHRA+ GS+ER I I+ EN+ G  PLWLSP Q ++  +  S  EYA+++       
Sbjct: 7   RPVIIHRAILGSVERMIAILTENYAGKWPLWLSPRQVMLVPVNPSLEEYAKQVCKRFVEA 66

Query: 579 HLSIETDFRNET-INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
               + D  +   +N KIR   + +   I++ G+KE    S+ +R   +    ++ +L+ 
Sbjct: 67  GFMADADLDSSCLLNKKIRNAQLAQYNFILVVGEKERLSNSVNVRTRDNKVHGELPVLEV 126

Query: 638 I 638
           +
Sbjct: 127 M 127


>gi|134297920|ref|YP_001111416.1| phosphoribulokinase/uridine kinase [Desulfotomaculum reducens MI-1]
 gi|134050620|gb|ABO48591.1| phosphoribulokinase/uridine kinase [Desulfotomaculum reducens MI-1]
          Length = 554

 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/161 (29%), Positives = 78/161 (48%), Gaps = 2/161 (1%)

Query: 38  AVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAI 96
            VA  I+  + DL  P+  +  +  +    P  + V R S   ++  A+  I P     I
Sbjct: 36  VVAAFIDNVLKDLRTPLTSDCHVRFVDLTMPEGVRVYRRSVTALLMRAISEILPGSNAVI 95

Query: 97  GPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEA 156
              + +G Y +   ++P    ++A+IE++M  II  D P++   L  E A  L     + 
Sbjct: 96  QHSLGNGIYGEIHYDRPLKDKDIARIERQMHYIIEADEPWVLMNLKKEDAERLLTEAGQT 155

Query: 157 YKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
            K+++L  +P KE + LY  G ++DLC G  V STG +K F
Sbjct: 156 EKIQLLHYLP-KEEIELYSCGGYYDLCHGALVPSTGILKNF 195


>gi|331268729|ref|YP_004395221.1| phosphoribulokinase family protein [Clostridium botulinum
           BKT015925]
 gi|329125279|gb|AEB75224.1| phosphoribulokinase family protein [Clostridium botulinum
           BKT015925]
          Length = 551

 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 100/191 (52%), Gaps = 4/191 (2%)

Query: 23  GSDVAESISRSLAKKAVAVA--INGKVCDLSDPVRE-GSIEIITPEDPRSLAVIRHSCAH 79
           GS++ E + +S  ++  ++    NGK+ +LS  ++E G  E++ P+   S+     +   
Sbjct: 19  GSNLYEILKKSNLEETTSILGWFNGKIYELSHEIQEDGYFELVDPKRKISVLAYMRTLQF 78

Query: 80  IMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQ 139
           I+ ++V+ ++P  +V I   +  G + +  KE P +  ++  I++KM++II ++    K 
Sbjct: 79  ILIKSVRELYPGAKVRIEHSLSKGIFGEIHKETPLTITDIKNIKEKMKDIIEKNIIIHKL 138

Query: 140 YLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFK 199
            +S EKA E+F+S     K+ + + +   + VTLY     +D   GP   STG+V+ F  
Sbjct: 139 LVSKEKAIEIFKSYDMDAKLRMFKHVD-NDKVTLYELDGLYDYFYGPMAYSTGEVQLFDL 197

Query: 200 LMKVAGAYWRG 210
           +    G   RG
Sbjct: 198 MYYEPGFILRG 208


>gi|325474977|gb|EGC78163.1| hypothetical protein HMPREF9353_01010 [Treponema denticola F0402]
          Length = 301

 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 98/196 (50%), Gaps = 4/196 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           +  K+TFPDG+ K F VH   +        +L    V + +N  V  L+  +  + +IE 
Sbjct: 2   ASFKITFPDGTQKEF-VHPVSARELIQYLPALPSPIVGIKVNNLVVPLNKTIDVQSNIEP 60

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +T  D       R +   I+A A + ++P++++ +G  ++ G+YY  + +     D    
Sbjct: 61  VTLADREGSNFYRRTLCLILAAAAKELYPDLRLLMGHSLDYGYYYTLEGKNSGKVD-FKA 119

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           I+ KM E++A+D P   ++LS+E+A E FE   +     +L +  +K  + + R G + D
Sbjct: 120 IKAKMDEMVAQDMPIDTRWLSYEEALEKFEHSNQPETHRLL-NYTSKPRILINRLGNYED 178

Query: 182 LCRGPHVRSTGQVKKF 197
           L   P +   G+VK F
Sbjct: 179 LYFQPLMDRIGEVKVF 194


>gi|253682477|ref|ZP_04863274.1| phosphoribulokinase family protein [Clostridium botulinum D str.
           1873]
 gi|253562189|gb|EES91641.1| phosphoribulokinase family protein [Clostridium botulinum D str.
           1873]
          Length = 551

 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 99/191 (51%), Gaps = 4/191 (2%)

Query: 23  GSDVAESISRSLAKKAVAVA--INGKVCDLSDPVRE-GSIEIITPEDPRSLAVIRHSCAH 79
           GS++ E + +   ++  ++    NGK+ +LS  V+E G+ E++ P+   S+     +   
Sbjct: 19  GSNLYEILKQLNLEETTSILGWFNGKIHELSYEVKEDGNFELVDPKRKISILSYMRTLQF 78

Query: 80  IMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQ 139
           I+ ++V+ ++P  +V I   +  G + +  K+ P + +++  I+ KM+EII +D    K 
Sbjct: 79  ILIKSVRELYPNAKVRIEHSLSKGIFGEIHKDTPLTINDIENIKSKMREIIEKDIIIHKL 138

Query: 140 YLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFK 199
            +S EKA E+F+      K+ + + +   + VTLY     +D   GP   STG+VK F  
Sbjct: 139 SVSKEKAIEIFKKYHMDAKLRMFKHVDNNK-VTLYELDGMYDYFYGPMAYSTGKVKMFDL 197

Query: 200 LMKVAGAYWRG 210
           +    G   RG
Sbjct: 198 MYYSPGFILRG 208


>gi|18977665|ref|NP_579022.1| prolyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
 gi|74580758|sp|Q8U1C4|SYP_PYRFU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|18893393|gb|AAL81417.1| prolyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
          Length = 479

 Score = 78.2 bits (191), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 92/401 (22%), Positives = 165/401 (41%), Gaps = 79/401 (19%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSG-HWDSYRANMFAV 321
           G+  W   G KI + +  ++  ++ + D++E+  P ++ +  +Q+   H   +   +F V
Sbjct: 33  GMNVWLPYGLKIMKNIEKFIHEEMERTDHQEVLFPALIPETEFQKEAEHIAGFEGEVFWV 92

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
             A     D+R   L+P +     ++F   ++S+ +LP ++ +  +VYR E +     L+
Sbjct: 93  THAGHEPLDVR-LVLRPTSETAMYSMFALWIRSHADLPFKVYQIVNVYRYE-TKHTRPLI 150

Query: 382 RVRG----FTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKL------STR 430
           RVR     F    AH  F   E+   E L+I            F+ +M KL      S R
Sbjct: 151 RVREISRFFEAHTAHADFEDAERQIKEDLEI------------FDNLMKKLAIAYVISKR 198

Query: 431 PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRD 490
           PE        WD                             GA+Y    E ++ D  GR 
Sbjct: 199 PE--------WDKFP--------------------------GAYYSLGAEVVMPD--GRT 222

Query: 491 WQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGN 545
            Q GT+     N    +N  Y        +   +H+  FG  ER +  +I    ++    
Sbjct: 223 LQIGTMHNYKQNFAKAYNILYEKEDGTHDY---VHQTTFGMSERLLAAVIAIHGDDRGMV 279

Query: 546 LPLWLSPIQAIVTTITSSAVE-----YAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           LP  ++PIQ ++  I     E     YA+EI   LK   + +  D R++   +K  +  +
Sbjct: 280 LPPTIAPIQVVIVPIPKKGSEEEVYSYAREIEEELKLAGIRVHLDLRDKRPGWKFYDWEL 339

Query: 601 KKIPIIIICGDKEASERSIGIRR---FGSTTTQKVSLLDAI 638
           K +P+ I  G ++A+E+++ + R       T  +  L+D +
Sbjct: 340 KGVPVRIEVGPRDAAEKTVVLARRDKLEKITVSREELVDKV 380


>gi|150019323|ref|YP_001311577.1| phosphoribulokinase/uridine kinase [Clostridium beijerinckii NCIMB
           8052]
 gi|149905788|gb|ABR36621.1| phosphoribulokinase/uridine kinase [Clostridium beijerinckii NCIMB
           8052]
          Length = 551

 Score = 77.0 bits (188), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 50/163 (30%), Positives = 84/163 (51%), Gaps = 3/163 (1%)

Query: 37  KAVAVA-INGKVCDLSDPVRE-GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           K +A+  +NG+ C+L++ + + G +E+I  +    + +   +   I  +    ++PE ++
Sbjct: 34  KDIAICKLNGRYCELTEVIEDDGEVELIGFDTELGMKIFTRTLQFIFIKVALDLFPESKI 93

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            I   I    Y +  KE P S  E+ +I+ KMQEII R+ P      S E+A ++FE  K
Sbjct: 94  TIDHAISKAVYGEVHKENPLSKGEIDKIKVKMQEIIDRNVPIKSMRTSKEEAIKIFEGYK 153

Query: 155 EAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
              KV++L+    K +V LY     +D   GP   STG + KF
Sbjct: 154 MDDKVKLLKYCDIK-HVHLYELEGRYDYFYGPMGYSTGIINKF 195


>gi|125972853|ref|YP_001036763.1| phosphoribulokinase/uridine kinase [Clostridium thermocellum ATCC
           27405]
 gi|256005723|ref|ZP_05430678.1| TGS domain protein [Clostridium thermocellum DSM 2360]
 gi|125713078|gb|ABN51570.1| phosphoribulokinase/uridine kinase [Clostridium thermocellum ATCC
           27405]
 gi|255990296|gb|EEU00423.1| TGS domain protein [Clostridium thermocellum DSM 2360]
 gi|316940909|gb|ADU74943.1| TGS domain-containing protein [Clostridium thermocellum DSM 1313]
          Length = 557

 Score = 77.0 bits (188), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 99/196 (50%), Gaps = 6/196 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           IK+ FPD S +      +  +++ES         VA  +N  + +LS  + E   +E I 
Sbjct: 9   IKVVFPDNSEREVYEGISLQELSESCKNQYKSTIVAAKVNNDIKELSYRLNESCRVEFID 68

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
             D   + + + S + I+ +AV  ++P+ +V I   I  G Y +   + P + +E+  I+
Sbjct: 69  LTDDDGMRIYKRSLSFILIKAVNDLFPDRKVIICHSISKGIYCEVKGDTPLTVEEVDMIK 128

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN--VTLYRQGEWFD 181
            +M+EI+    PF+K+ +S ++ARE+F   ++  +++   SI  ++   VTLY    + D
Sbjct: 129 NRMKEIVNLKIPFIKKIMSLDEAREVF---RKIGRMDRFRSIEYRKKPYVTLYECDGFQD 185

Query: 182 LCRGPHVRSTGQVKKF 197
              G  V  TG + KF
Sbjct: 186 YFYGYMVPHTGYLDKF 201


>gi|295704483|ref|YP_003597558.1| threonyl-tRNA synthetase 2 (Threonine--tRNA ligase)(ThrRS)
           [Bacillus megaterium DSM 319]
 gi|294802142|gb|ADF39208.1| threonyl-tRNA synthetase 2 (Threonine--tRNA ligase)(ThrRS)
           [Bacillus megaterium DSM 319]
          Length = 113

 Score = 77.0 bits (188), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 38/106 (35%), Positives = 60/106 (56%)

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           + N++G  PLWL+P+Q  +  I +  VEYA ++ + L+S    +E D R E I  KIRE 
Sbjct: 1   MNNYEGQFPLWLAPVQFKLLPIAAPHVEYAYKVKHELESQGYRVEVDDRIEKIGLKIREA 60

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            + K+P + + GD+E    S+ +R+ G      VS+ +A   L KE
Sbjct: 61  EMLKVPYMAVIGDREVENESLAMRKHGKENIGTVSVKEAAVYLNKE 106


>gi|281417052|ref|ZP_06248072.1| phosphoribulokinase/uridine kinase [Clostridium thermocellum JW20]
 gi|281408454|gb|EFB38712.1| phosphoribulokinase/uridine kinase [Clostridium thermocellum JW20]
          Length = 557

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 98/196 (50%), Gaps = 6/196 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           IK+ FPD S +      +  +++ES         VA  +N  + +LS  + E   +E I 
Sbjct: 9   IKVVFPDNSEREVYEGISLQELSESCKNQYKSTIVAAKVNNDIKELSYRLNESCRVEFID 68

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
             D   + + + S + I+ +AV  ++P+ +V I   I  G Y +     P + +E+  I+
Sbjct: 69  LTDDDGMRIYKRSLSFILIKAVNDLFPDRKVIICHSISKGIYCEVKGYTPLTVEEVDMIK 128

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN--VTLYRQGEWFD 181
            +M+EI+    PF+K+ +S ++ARE+F   ++  +++   SI  ++   VTLY    + D
Sbjct: 129 NRMKEIVNLKIPFIKKIMSLDEAREVF---RKIGRMDRFRSIEYRKKPYVTLYECDGFQD 185

Query: 182 LCRGPHVRSTGQVKKF 197
              G  V  TG + KF
Sbjct: 186 YFYGYMVPHTGYLDKF 201


>gi|195035421|ref|XP_001989176.1| GH11578 [Drosophila grimshawi]
 gi|193905176|gb|EDW04043.1| GH11578 [Drosophila grimshawi]
          Length = 245

 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 53/142 (37%), Positives = 79/142 (55%), Gaps = 11/142 (7%)

Query: 5   IKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG--SIEI 61
           IK+T PDG  +       T  DVA  IS+ LA   V   +NG+V DL D V E   S+++
Sbjct: 108 IKVTLPDGKQVDATAWETTPFDVASGISKGLADNTVISKVNGEVWDL-DRVLEADCSLQL 166

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELA 120
           +  +DP + AV  HS AHIM EA++ I+    +  GP IE GFYYD +   +  S+++  
Sbjct: 167 LKFDDPDAQAVFWHSSAHIMGEAMERIYGG-HLCYGPPIESGFYYDMYLDGEGISTNDYG 225

Query: 121 QIEKKMQEIIARDSPFLKQYLS 142
            +E  +++I+       KQ+LS
Sbjct: 226 AMETLVKQIVKE-----KQHLS 242


>gi|225174181|ref|ZP_03728180.1| phosphoribulokinase/uridine kinase [Dethiobacter alkaliphilus AHT
           1]
 gi|225169966|gb|EEG78761.1| phosphoribulokinase/uridine kinase [Dethiobacter alkaliphilus AHT
           1]
          Length = 559

 Score = 75.1 bits (183), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 95/197 (48%), Gaps = 8/197 (4%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI----E 60
           + +  PD  I   P + +  ++   ++       VA  ++ KV DL   V   S+    +
Sbjct: 10  VDILLPDNEIIELPGNRSLLEIRRDVAEHFPSTIVAALVDEKVRDLETVVDTPSVIKFLD 69

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           + T E  R   + + S   ++  A   ++P+ +V +   +  G Y + DK    ++DE+A
Sbjct: 70  LYTKEGAR---IYQRSLTFLLLYATHVLFPKAEVKVEHSLGKGLYCEIDKNSKLTADEVA 126

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IE+KM E++ +D P +K  +  ++A E+F  +    KV + +  P KE +TLY    + 
Sbjct: 127 AIEQKMWEVVNQDLPIVKNKVPVDEAIEIFRKEGFEDKVRLYKRWP-KETLTLYGINSFH 185

Query: 181 DLCRGPHVRSTGQVKKF 197
           D   G  V STG ++ F
Sbjct: 186 DSLHGYMVPSTGVLQLF 202


>gi|9719727|gb|AAF97829.1|AC034107_12 Contains similarity to threonyl-tRNA synthetase from Arabidopsis
           thaliana gb|Y14329
          Length = 130

 Score = 75.1 bits (183), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 55/95 (57%)

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH 579
            V+IHRAV  S+ER   I++E +KG  P WLSP QAIV +++     YA ++ + +    
Sbjct: 5   SVLIHRAVLSSVERLFAILLEQYKGKFPFWLSPRQAIVCSVSEDYRSYADKVRDQIHEAG 64

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
             ++ D  +  ++ K++E  +     I++ GD+EA
Sbjct: 65  YYVDVDTTDRNVSDKVQEAQVAHYNYILVVGDEEA 99


>gi|13541912|ref|NP_111600.1| prolyl-tRNA synthetase [Thermoplasma volcanium GSS1]
 gi|74581167|sp|Q979Q5|SYP_THEVO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|14325343|dbj|BAB60247.1| tRNA synthetase Pro [Thermoplasma volcanium GSS1]
          Length = 462

 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 96/408 (23%), Positives = 173/408 (42%), Gaps = 66/408 (16%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAV 321
           G+  W   GWKI + + + +R  + K  ++E+N P ++ + + + +  H   +   ++ V
Sbjct: 30  GMNVWRPYGWKIMKLIDNIIRNAVDKHSFDEVNFPVLISRGMLEVEFEHIRGFENEIYWV 89

Query: 322 -KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            K   + +++    AL+P +      +F+  ++S+ +LP+++ +  SVYR E   +    
Sbjct: 90  TKGGKEKLEE--ELALRPTSESAMYPMFSLWVRSHADLPLKIYQIVSVYRYETKHT-RSF 146

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKL-STRPEKRVGSDA 439
           +R+R     +AH   T  + + +  K  +    I+ +      +  L   RPE       
Sbjct: 147 IRIREIHFFEAH---TAHESYEDAEKQMDEYRIIWTEIADALCLPFLYDQRPE------- 196

Query: 440 LWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI-QV 498
            WD                             GA Y   F+ ++    GR  Q GTI Q 
Sbjct: 197 -WDKFP--------------------------GAMYTIAFDTVMPS--GRSLQIGTIHQY 227

Query: 499 DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF----IGIMIENFKGNLPLWLSPIQ 554
             N    ++  Y+    E      +H+  FG  ER     IGI  ++    LP  ++PIQ
Sbjct: 228 GTNFSKNYDIKYL---KEDGTFEYVHQTTFGMSERLLAAIIGIHGDDKGLILPPAIAPIQ 284

Query: 555 AIVTTITSSAVE-YAQEIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDK 612
            ++  I    VE YA++I   L    +    D R N T  YK  +  ++ +P+ I  G++
Sbjct: 285 VVIVPIPGEGVERYAKDIETTLNGIGIRCHVDNRDNYTPGYKYNDWEMRGVPLRIEVGER 344

Query: 613 EASERSI-----GIRRFGSTTTQKVSLLDAIP---ILTKESLPPDCQK 652
           E  E+++      IR  G  T Q+  L+  +P    L KE +  D +K
Sbjct: 345 ELKEKTVTLAARNIR--GKKTVQREKLVYEVPDMLDLVKEKITEDAKK 390


>gi|288932452|ref|YP_003436512.1| prolyl-tRNA synthetase [Ferroglobus placidus DSM 10642]
 gi|288894700|gb|ADC66237.1| prolyl-tRNA synthetase [Ferroglobus placidus DSM 10642]
          Length = 475

 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 89/381 (23%), Positives = 161/381 (42%), Gaps = 58/381 (15%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVL-DQHLWQQSGHWDSYRANMFAVK 322
           G+  W   G+KI + +   +R  +  D+EE+  P ++ +  L ++S H   +   +F V 
Sbjct: 30  GLYVWFPFGFKIRRLVYDKLREIMDRDHEEVYFPTLIPETELGKESEHIKGFEDEVFWVT 89

Query: 323 CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMR 382
                  D++  AL+P +      +F   ++S+ +LP+R+ +  +V+R E   +   L+R
Sbjct: 90  HGGLEKLDVK-LALRPTSETAMYPMFKLWIRSHADLPLRVYQIVNVFRYETKHT-RPLIR 147

Query: 383 VRGFTQ-DDAHVFCTKEQMFNECLKIHNLIISIYKDF-GFEKIMVKLSTRPEKRVGSDAL 440
           +R  T   +AH   T  + + E  +   L +S+YK+F  F  I   +  RPE        
Sbjct: 148 LREITSFKEAH---TAHRNYEEAEENVRLAVSLYKEFYDFLAIPYLILRRPE-------- 196

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI-QVD 499
           WD                             GA Y   F+ ++ D  GR  Q GT+  + 
Sbjct: 197 WDKF--------------------------PGADYTIAFDTVMPD--GRTMQIGTVHHLA 228

Query: 500 FNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQA 555
            N    F+  Y     +  +   +H+  +G  ER I  +I    ++    LP  +SP+Q 
Sbjct: 229 DNFAKTFDIKYETPDGDHAY---VHQTCYGISERCIAALISIHGDDLGLVLPFEVSPVQI 285

Query: 556 IVTTIT-----SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           ++  I         ++ ++ +   LK +   +  D  +E    K  +  +K +PI I  G
Sbjct: 286 VIIPILYKGKEEEVMDLSKRVYEKLKGYGFRVVLDDTDERPGAKYYKWELKGVPIRIEIG 345

Query: 611 DKEASERSIGIRRFGSTTTQK 631
            KEA ER+  +  F     +K
Sbjct: 346 PKEA-ERNEAVVSFRDEKVKK 365


>gi|213864685|ref|ZP_03386804.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
          Length = 34

 Score = 74.7 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 30/34 (88%), Positives = 33/34 (97%)

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC 395
           +AEFGS +RNEPSGSLHGLMRVRGFTQDDAH+FC
Sbjct: 1   MAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFC 34


>gi|409905|gb|AAD12408.1| Homology to threonyl-tRNA synthetase M36594 [Mycoplasma genitalium]
          Length = 114

 Score = 74.3 bits (181), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 38/114 (33%), Positives = 59/114 (51%), Gaps = 6/114 (5%)

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
           K + +  LW ++E+ M+ VL  +    Q  I      G  AFYGPK ++  K    +   
Sbjct: 7   KFIDNPGLWRESESQMENVLKDLNIQYQKEI------GAAAFYGPKIDFQFKTIFKKMIT 60

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNL 546
             TIQ+DF LP +F+  Y++  +    PV+IH  + G+ ERFI  ++E   GN 
Sbjct: 61  IATIQLDFLLPEKFDLTYIDKKNTLKKPVIIHVGIIGTYERFIAALLEKTSGNF 114


>gi|42527791|ref|NP_972889.1| phosphoribulokinase/uridine kinase family protein [Treponema
           denticola ATCC 35405]
 gi|41818619|gb|AAS12808.1| phosphoribulokinase/uridine kinase family protein [Treponema
           denticola ATCC 35405]
          Length = 550

 Score = 74.3 bits (181), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 98/196 (50%), Gaps = 4/196 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           +  K+TFPDG+ K F    +  ++ +      A   V + +N  V  L+  +  + +IE 
Sbjct: 2   ASFKITFPDGTQKEFVNPVSARELVQYFPACPAP-IVGIKVNNLVVPLNKTIDVQSNIEP 60

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +T  D       R +   I+A A + ++P +++ +G  ++ G+YY  + +   S  +   
Sbjct: 61  VTLADREGSNFYRRTLCLILAAAAKELYPGLRLLMGHSLDYGYYYTLEGKNS-SKVDFKA 119

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           I+ KM E++A+D P   ++LS+E+A E FE   +     +L +  +K  + + R G + D
Sbjct: 120 IKAKMDEMVAQDMPIDTRWLSYEEALEKFEHSNQPETHRLL-NYTSKPRILINRLGSYED 178

Query: 182 LCRGPHVRSTGQVKKF 197
           L   P +   G+VK F
Sbjct: 179 LYFQPLMDRIGEVKVF 194


>gi|168185537|ref|ZP_02620172.1| phosphoribulokinase family protein [Clostridium botulinum C str.
           Eklund]
 gi|169296471|gb|EDS78604.1| phosphoribulokinase family protein [Clostridium botulinum C str.
           Eklund]
          Length = 552

 Score = 73.9 bits (180), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 86/176 (48%), Gaps = 2/176 (1%)

Query: 36  KKAVAVAINGKVCDLSDPVRE-GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           K  +    NGK+ +L+  V E G+ EI+ P+   S+     +   I+ ++V+ ++P  +V
Sbjct: 35  KTPILAWFNGKIYELNHKVYEDGNFEIVDPKRKISVLAYMRTLQFILIKSVKDLYPGAKV 94

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            I   +  G + +  K  P + +++  I+ +MQ+II ++    K  +S EKA E+F+   
Sbjct: 95  RIEHSLSKGIFGEVSKNTPLTKEDVKDIKNRMQQIIDKNIVINKLSVSKEKAIEIFKEYD 154

Query: 155 EAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRG 210
              K+ +   +  K NVTLY     +D   G    STG VK F  +    G   RG
Sbjct: 155 MDAKLRMFAHVDNK-NVTLYELDGMYDYFYGSMAYSTGHVKLFDLMYYEPGFILRG 209


>gi|145537973|ref|XP_001454695.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124422466|emb|CAK87298.1| unnamed protein product [Paramecium tetraurelia]
          Length = 243

 Score = 73.9 bits (180), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 82/158 (51%), Gaps = 7/158 (4%)

Query: 495 TIQVD--FNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
           T+Q+   + L  ++   Y +  +    PV++HRA+ GS+ER I ++ E   G  P WLSP
Sbjct: 4   TVQLHLLYFLEKKYELGYHHLKAGFARPVIVHRAILGSLERMIAVLTEQCGGKWPFWLSP 63

Query: 553 IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
            Q ++  +++   + A++IA  L+    ++ TD  ++T+  K+R   I+    + + G++
Sbjct: 64  KQLVLCPVSAYYKDVAEKIAARLRLEGYTVNTDESDQTLAKKVRNAQIQYYNFVGVIGEE 123

Query: 613 EASERSIGIRRFGSTTTQKVSLLDAIPILTK--ESLPP 648
           E     I +R     T  ++  L  IP L K  ESL P
Sbjct: 124 EVKAGVIDVRDCEKNT--RIGKL-TIPQLCKFFESLKP 158


>gi|260886406|ref|ZP_05897669.1| phosphoribulokinase family protein [Selenomonas sputigena ATCC
           35185]
 gi|330838828|ref|YP_004413408.1| phosphoribulokinase/uridine kinase [Selenomonas sputigena ATCC
           35185]
 gi|260863853|gb|EEX78353.1| phosphoribulokinase family protein [Selenomonas sputigena ATCC
           35185]
 gi|329746592|gb|AEB99948.1| phosphoribulokinase/uridine kinase [Selenomonas sputigena ATCC
           35185]
          Length = 548

 Score = 73.9 bits (180), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 93/189 (49%), Gaps = 6/189 (3%)

Query: 12  GSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPEDPRSL 70
           G  +  P   T  ++A+ + +      VA  ++  + DL   V +  +IE++        
Sbjct: 6   GKGREIPAEMTLLELAQEVQKKGEPLIVAARVDNVLRDLQTSVGDFHTIELVDTRSEFGR 65

Query: 71  AVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE--LAQIEKKMQE 128
            + R S   ++  AV+ ++PE +V +      G Y     + PF   E  +  +E++M+E
Sbjct: 66  RIYRRSVVFLLIMAVRELYPEAEVVVQFTAHKGLYCAI--QSPFDVTESVVRALEQRMRE 123

Query: 129 IIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           I+A + P +K+ L  E+  +LF+  ++  K  ++ S+   E  +LY  GE++D   GP V
Sbjct: 124 IVAENRPIVKKRLQREEVVQLFKKSEQIEKANLVMSLET-EKASLYYCGEFYDYLFGPMV 182

Query: 189 RSTGQVKKF 197
            +TG + KF
Sbjct: 183 SATGVLDKF 191


>gi|166367159|ref|YP_001659432.1| prolyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
 gi|189083503|sp|B0JTD7|SYP_MICAN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|166089532|dbj|BAG04240.1| proline-tRNA ligase [Microcystis aeruginosa NIES-843]
          Length = 603

 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/171 (32%), Positives = 82/171 (47%), Gaps = 17/171 (9%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+E   H+ L R     +I   GSG+  +    W++ Q +   +R ++ K   +E   PQ
Sbjct: 17  EAEIPSHKCLVRAG---YIRRIGSGIYAYLPLMWRVLQKVSQIVREEMNKAGAQECLLPQ 73

Query: 299 VLDQHLWQQSGHWDSY---RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           +    LWQ+SG WD+Y      MFA+     T +  R   L P +     AV    ++SY
Sbjct: 74  LQPAELWQESGRWDTYTKAEGIMFAL-----TDRQNRELGLGPTHEEVITAVARDLIRSY 128

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           R+LPV L +  + +R+E      GLMR R F   DA+ F   E    ECLK
Sbjct: 129 RQLPVNLYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSFNLDE----ECLK 174


>gi|189462032|ref|ZP_03010817.1| hypothetical protein BACCOP_02709 [Bacteroides coprocola DSM 17136]
 gi|189431246|gb|EDV00231.1| hypothetical protein BACCOP_02709 [Bacteroides coprocola DSM 17136]
          Length = 554

 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 89/184 (48%), Gaps = 2/184 (1%)

Query: 15  KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVI 73
           K+FP  +T  D+    +  +    V+  +N KV  L+  V     IE +   +P  +   
Sbjct: 13  KDFPEGSTLLDIYNGFNLEMPYGPVSAKVNNKVEGLNFKVYYNKDIEFLDITNPSGMRTY 72

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
             S   I+ +AV+ ++P+  +++   +  G+Y     ++    D++ +I++KMQEII  +
Sbjct: 73  FRSLCFILVKAVEELYPQGSISLEHPVSKGYYCTLHLDRSIGLDDVTRIKQKMQEIITDN 132

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQ 193
            PF +     E+A ELF  +    K ++L++   +     YR G+  D   G  V STG 
Sbjct: 133 IPFQRIECHTEQAVELFTQRGMMDKAKLLKT-SGQLYTFYYRLGDTIDYYYGSLVPSTGY 191

Query: 194 VKKF 197
           +K F
Sbjct: 192 IKLF 195


>gi|326529007|dbj|BAK00897.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 81

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 39/84 (46%), Positives = 52/84 (61%), Gaps = 6/84 (7%)

Query: 427 LSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDA 486
           LSTRP+K +G+   W+ AE+ +K  L   K   + ++N G    +GAFYGPK +  L D 
Sbjct: 1   LSTRPKKYLGNIEDWNIAEDQLKAAL--TKFGKEYKLNEG----DGAFYGPKIDVKLFDV 54

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFY 510
            GR+ QCGT Q+DF LP RFN  Y
Sbjct: 55  FGREHQCGTCQLDFQLPVRFNLQY 78


>gi|159030425|emb|CAO91326.1| proS [Microcystis aeruginosa PCC 7806]
          Length = 603

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/171 (32%), Positives = 82/171 (47%), Gaps = 17/171 (9%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+E   H+ L R     +I   GSG+  +    W++ Q +   +R ++ K   +E   PQ
Sbjct: 17  EAEIPSHKCLVRAG---YIRRIGSGIYAYLPLMWRVLQKVSQIVREEMNKAGAQECLLPQ 73

Query: 299 VLDQHLWQQSGHWDSY---RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           +    LWQ+SG WD+Y      MFA+     T +  R   L P +     AV    ++SY
Sbjct: 74  LQPAELWQESGRWDTYTKAEGIMFAL-----TDRQNRELGLGPTHEEVITAVARDLIRSY 128

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           R+LPV L +  + +R+E      GLMR R F   DA+ F   E    ECLK
Sbjct: 129 RQLPVNLYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSFNLDE----ECLK 174


>gi|261883753|ref|ZP_06007792.1| threonyl-tRNA synthetase [Campylobacter fetus subsp. venerealis
           str. Azul-94]
          Length = 109

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/99 (38%), Positives = 55/99 (55%), Gaps = 6/99 (6%)

Query: 32  RSLAKKAVAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE 91
           R++    +A  +N ++ D       G  EI       +L VIRHSCAH+MA A++ ++P 
Sbjct: 12  RNIMSDIIAYKVNEQIVDTQSYCGNGGEEIFFDNSKEALDVIRHSCAHLMAAAIKELYPN 71

Query: 92  VQVAIGPIIEDGFYYDF-----DKEQPFSSDELAQIEKK 125
            +  +GP IEDGFYYD      D E+   SD L +IEK+
Sbjct: 72  AKFFVGPCIEDGFYYDMRVSKSDGEKLGESD-LEEIEKR 109


>gi|169841059|ref|ZP_02874172.1| Threonyl-tRNA synthetase [candidate division TM7 single-cell
           isolate TM7a]
          Length = 52

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 30/48 (62%), Positives = 38/48 (79%)

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK 517
           G+GAFYGPK ++ +KD+IGR WQCGTIQ+DFNLP RF   Y+ +  EK
Sbjct: 3   GDGAFYGPKIDFKMKDSIGRIWQCGTIQLDFNLPQRFEMSYIGADGEK 50


>gi|121535133|ref|ZP_01666949.1| phosphoribulokinase/uridine kinase [Thermosinus carboxydivorans
           Nor1]
 gi|121306242|gb|EAX47168.1| phosphoribulokinase/uridine kinase [Thermosinus carboxydivorans
           Nor1]
          Length = 553

 Score = 71.6 bits (174), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 45/206 (21%), Positives = 99/206 (48%), Gaps = 2/206 (0%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           I++ F +G  + +P   T   ++   +       VA  +N  + DL   + +   ++ I 
Sbjct: 5   IEVRFINGDKRRYPKETTLLAISRERAAFYTSPIVAAKVNNDIKDLQTEINDDCLVDFID 64

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
                 + V + S   +M  A + ++P+ +V +   +  G Y + +  +  + +++ ++E
Sbjct: 65  LRSEEGIRVYQRSLVFVMVAAARDLFPDGEVTVEHSLSKGLYCELNIGRAVTPEDIERLE 124

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M++I+A D P +++    ++A  LFE+  +  KV++L  +  +E V++Y  G+ +D  
Sbjct: 125 VRMRQIVAEDRPIVRKSYQLQEAIRLFEAAGQTEKVKLLGQL-KRERVSIYYCGDVYDYF 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWR 209
            G    STG ++ F  L    G   R
Sbjct: 184 YGTMAPSTGCLQVFGLLFHPPGFLLR 209


>gi|323701681|ref|ZP_08113353.1| phosphoribulokinase/uridine kinase [Desulfotomaculum nigrificans
           DSM 574]
 gi|323533454|gb|EGB23321.1| phosphoribulokinase/uridine kinase [Desulfotomaculum nigrificans
           DSM 574]
          Length = 555

 Score = 71.2 bits (173), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 77/161 (47%), Gaps = 2/161 (1%)

Query: 38  AVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAI 96
            VA  IN  + DL   +  E  I  +       + V   S   ++  A+  + P     I
Sbjct: 38  VVAAIINNTLQDLRTEISEECEIRFVDLTSEHGIRVYHRSATMLLMRAIAEVLPGSTAII 97

Query: 97  GPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEA 156
              + +G Y + + ++P    ++ +IE++M  II  D P +++ +S + A  LF      
Sbjct: 98  QHSLGNGLYGEINYDKPLKDRDITRIERQMGYIIEADEPMVRKKVSKKDAERLFTEAGLV 157

Query: 157 YKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
            K+++L  +P +E V +Y  G ++D   GP V STG +K+F
Sbjct: 158 EKIDLLSYLPGEE-VEIYCCGGFYDFYNGPLVPSTGYIKQF 197


>gi|327311077|ref|YP_004337974.1| prolyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
 gi|326947556|gb|AEA12662.1| prolyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
          Length = 491

 Score = 71.2 bits (173), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 91/403 (22%), Positives = 170/403 (42%), Gaps = 65/403 (16%)

Query: 249 LAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD--YEEINTPQVLDQHLW- 305
           L RE +++ I     G   W   G KI + + + +R ++ D   ++E+  P  +    + 
Sbjct: 30  LLREAEIYDIRYPVKGAFVWRPYGMKIRRNVEAVIR-ELHDSTGHQEVLFPVFIPYEFFS 88

Query: 306 QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEF 365
           ++S H   + + +F V    +  + L    L+P +    + +F   ++ +R+LP+ + + 
Sbjct: 89  KESQHIRGFESEVFWVSKGGEAGERL---ILRPTSETAMMPMFKLWIQDHRDLPLAVYQI 145

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQ-DDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
            SV+R E +   + ++RVR  +   +AH      +     ++   L + IYK   F+K+ 
Sbjct: 146 VSVFRAE-TKMTNPMIRVREISMFKEAHTAHADREDAERQVR---LAVDIYKKI-FDKMC 200

Query: 425 VK--LSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           +   +S RPE        WD                             GA Y   F+ I
Sbjct: 201 IPYLISQRPE--------WDKFA--------------------------GAVYTIAFDTI 226

Query: 483 LKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI-- 539
           L D  GR  Q GT+  +  N    F   Y+       +   +H   +G  ER I  M+  
Sbjct: 227 LPD--GRTLQIGTVHYLGTNFSKVFEVTYLRPDGSHEY---VHTTSYGISERSIAAMLII 281

Query: 540 --ENFKGNLPLWLSPIQAIVTTIT-----SSAVEYAQEIANLLKSHHLSIETDFR-NETI 591
             ++    +P  L+PIQA+V  I       + +E A  +A  L++  + +  D R ++T 
Sbjct: 282 HGDDAGTTIPPALAPIQAVVVPIIYGEERKAVMEAASSVAERLRASGVRVHIDDREDKTP 341

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
            +K     +K +P+ I  G ++  +RS+ + R  +     V L
Sbjct: 342 GWKFYYWELKGVPLRIEIGKRDVEQRSVVLARRDTLEKYSVGL 384


>gi|303239635|ref|ZP_07326160.1| phosphoribulokinase/uridine kinase [Acetivibrio cellulolyticus CD2]
 gi|302592806|gb|EFL62529.1| phosphoribulokinase/uridine kinase [Acetivibrio cellulolyticus CD2]
          Length = 557

 Score = 71.2 bits (173), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 96/194 (49%), Gaps = 2/194 (1%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           IK+T PDGS K      +  ++++          VA  +   + +LS  +   + IE I 
Sbjct: 9   IKVTLPDGSEKEVVEGISLLELSKDCKNDYKSTIVAAKVENDIKELSFHLYNSAHIEFID 68

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
             +   + + R S + ++ +AV  ++P+ +V I   I  G + + +     +++E+++IE
Sbjct: 69  LTNDDGMRIYRRSLSFVLIKAVHDLFPDRKVTISHSISKGIFCEINGATQLTAEEVSKIE 128

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           ++M+E+I +  PF+K+ +S ++A+E+F       +   +E    K  VT+Y    + D  
Sbjct: 129 ERMKELINQKIPFIKRIMSIDEAKEIFSKTGRIDRFRAIE-YRKKPYVTIYNCDGYEDYF 187

Query: 184 RGPHVRSTGQVKKF 197
            G     TG + KF
Sbjct: 188 YGYMTPDTGYLNKF 201


>gi|158335473|ref|YP_001516645.1| prolyl-tRNA synthetase [Acaryochloris marina MBIC11017]
 gi|189083486|sp|B0C230|SYP_ACAM1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|158305714|gb|ABW27331.1| prolyl-tRNA synthetase [Acaryochloris marina MBIC11017]
          Length = 600

 Score = 70.9 bits (172), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 86/186 (46%), Gaps = 14/186 (7%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+E   H+ L R     +I   GSG+  +    W++ Q +   +R ++     +E   PQ
Sbjct: 17  EAEIPSHKLLLRA---GYIRRVGSGIYAYLPLMWRVLQKVSQIVREEMDAAGAQECLLPQ 73

Query: 299 VLDQHLWQQSGHWDSY---RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           +    LWQ+SG WD+Y      MFA++   D     R   L P +     AV    ++SY
Sbjct: 74  IQPAELWQESGRWDTYTQAEGIMFALQDRQD-----RELGLGPTHEEVITAVARDMIRSY 128

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISI 414
           R+LP+ L +  + +R+E      GLMR R F   DA+ F T E        K+H+   +I
Sbjct: 129 RQLPLNLYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSFSTDEADLKIIYSKMHDAYCNI 187

Query: 415 YKDFGF 420
            +  G 
Sbjct: 188 LQRSGL 193


>gi|75763967|ref|ZP_00743592.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar
          israelensis ATCC 35646]
 gi|74488542|gb|EAO52133.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar
          israelensis ATCC 35646]
          Length = 102

 Score = 70.5 bits (171), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 37/90 (41%), Positives = 57/90 (63%), Gaps = 1/90 (1%)

Query: 5  IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
          I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N  + DL   + E + +EIIT
Sbjct: 6  IEIKFPDGSVKEFVNGVTLEEIAGSISSSLKKKAVAGKVNDGLYDLRRNIEENAEVEIIT 65

Query: 64 PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQ 93
           +    + + RHS AHI+A+AV+ ++ ++ 
Sbjct: 66 IDSNEGVEIARHSAAHILAQAVKRLYGDIN 95


>gi|190570494|ref|YP_001974852.1| prolyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|213019252|ref|ZP_03335059.1| prolyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|190356766|emb|CAQ54125.1| prolyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|212995361|gb|EEB56002.1| prolyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
          Length = 419

 Score = 70.5 bits (171), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 90/418 (21%), Positives = 169/418 (40%), Gaps = 73/418 (17%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRAN 317
           I +  SG+  W   G  + + + + +R +I     E+  P V    LW++SG +D Y   
Sbjct: 32  IKQTASGIYSWLPLGLLVLKNIENIIRDEIGAI--EVLMPCVQPASLWRESGRYDDYGKE 89

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           M  +K   ++          P +      +  + +KSY++LP+ L +    +R+E     
Sbjct: 90  MLRIKDRHES-----DMLFGPTHEEVVTDLIRNTVKSYKDLPLCLYQIQWKFRDEVR-PR 143

Query: 378 HGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP----- 431
           +G+MR R F   DA+ F    E   N    ++   I I+K  G   I V+  T P     
Sbjct: 144 YGVMRGREFLMKDAYSFDVDYEGALNSYNLMYKTYIKIFKRMGLTPIGVRADTGPIGGNL 203

Query: 432 ------EKRVGSDALWDD--------AENI-----MKGVLDTIKNS-----SQDRINT-- 465
                     G   L+ D        +E+I     +  V D + +      +Q+++N   
Sbjct: 204 SHEFHILANTGESTLYYDNKLFELLESEDIESLKSIYAVADDMHDPESCPITQEQLNVSK 263

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
           G+ +G   ++G K+   +K ++                           S+    V +H 
Sbjct: 264 GIEIGHIFYFGDKYSKPMKASV--------------------------TSQDGKNVNMHM 297

Query: 526 AVFG-SIERFIGIMIENF---KGNL-PLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHL 580
             +G  + R +G +IE F   KG + P  ++P +  +  + +   E A +I   LKS   
Sbjct: 298 GSYGIGVSRLVGAIIEAFHDDKGIIWPEAVAPFKVGLINLQTKVTEAADKIYKALKSDE- 356

Query: 581 SIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
            +  D  +E++  K     +  +P  II G K  SE  + ++   +   +++ + +AI
Sbjct: 357 -VLYDDTDESVGVKFARMDLIGLPWQIIIGKKAVSENIVEVKNRATGEVEEIQVEEAI 413


>gi|331657698|ref|ZP_08358660.1| threonyl-tRNA synthetase (Threonine--tRNA ligase)(ThrRS)
          [Escherichia coli TA206]
 gi|331055946|gb|EGI27955.1| threonyl-tRNA synthetase (Threonine--tRNA ligase)(ThrRS)
          [Escherichia coli TA206]
          Length = 79

 Score = 70.5 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 31/75 (41%), Positives = 47/75 (62%), Gaps = 1/75 (1%)

Query: 25 DVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAE 83
          DVA  I   LAK  +A  +NG++ D  D +  +  + IIT +D   L +IRHSCAH++  
Sbjct: 2  DVALDIGPGLAKACIAGRVNGELVDACDLIENDAQLSIITAKDEEGLEIIRHSCAHLLGH 61

Query: 84 AVQSIWPEVQVAIGP 98
          A++ +WP  ++AIGP
Sbjct: 62 AIKQLWPHTKMAIGP 76


>gi|323704700|ref|ZP_08116278.1| phosphoribulokinase/uridine kinase [Thermoanaerobacterium
           xylanolyticum LX-11]
 gi|323536162|gb|EGB25935.1| phosphoribulokinase/uridine kinase [Thermoanaerobacterium
           xylanolyticum LX-11]
          Length = 547

 Score = 70.5 bits (171), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 51/197 (25%), Positives = 92/197 (46%), Gaps = 3/197 (1%)

Query: 11  DGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRS 69
           +G++  FP H T  +++E    +   + VA  ++  + DLS  + R+  I+ +       
Sbjct: 6   EGAVCTFPDHVTLEEISEQFKDNHKYRIVAAKVDNLMVDLSTKIDRDCEIQFVDMSTEEG 65

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           + V R S   ++ +AV+ I P  +V I   +  G Y +       ++  +  I+++M+EI
Sbjct: 66  MMVYRRSLTFVLIKAVKDILPTSKVTIEHSLGKGLYCEIHGST-VNNKIVHDIKRRMREI 124

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
           I  D P +K+YL  E A  LF  +    KV + +    K  + +Y   +  D    P V 
Sbjct: 125 IDADYPIIKKYLDKESAVNLFSKEGLEEKVSLFK-YSDKAKIPVYFCEDVVDFFYSPCVP 183

Query: 190 STGQVKKFFKLMKVAGA 206
           STG +K F  ++   G 
Sbjct: 184 STGYLKLFDLILYFPGV 200


>gi|328947999|ref|YP_004365336.1| ATPase AAA [Treponema succinifaciens DSM 2489]
 gi|328448323|gb|AEB14039.1| AAA ATPase [Treponema succinifaciens DSM 2489]
          Length = 550

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 93/195 (47%), Gaps = 5/195 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           IK+TFPD S              E  + +  KK VAV +N ++C L  PV    SIE + 
Sbjct: 4   IKITFPDNSFIEAENEIRPILFLEKFN-AQNKKIVAVKVNNEICSLDSPVNITSSIEPVF 62

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +     ++ R S   ++A A   I+P  ++ +G  +  G+YY  +   P + + + +++
Sbjct: 63  SDSKDGSSIYRRSLCFVLAAAAHKIFPGKRLLVGHSLGYGYYYTLELGTPLTKENILKLK 122

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFES-KKEAYKVEILESIPAKENVTLYRQGEWFDL 182
            +M++II  D      ++S+ +A  LFE       + ++    P++  V + R   + DL
Sbjct: 123 NEMEQIIKYDKIIETDFISYSEACSLFEELGLTETRKQLNYRCPSR--VQINRLEGFSDL 180

Query: 183 CRGPHVRSTGQVKKF 197
             GP V +TG +  F
Sbjct: 181 YFGPLVGTTGILNVF 195


>gi|315635289|ref|ZP_07890566.1| proline--tRNA ligase [Aggregatibacter segnis ATCC 33393]
 gi|315476035|gb|EFU66790.1| proline--tRNA ligase [Aggregatibacter segnis ATCC 33393]
          Length = 571

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 77/170 (45%), Gaps = 8/170 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   GW++ Q + + +R ++ K    EI  P V    LWQ+SG WD Y   +  
Sbjct: 36  ASGLYNWMPTGWRVLQKVENIIREEMNKSGAIEIKMPVVQPAELWQESGRWDQYGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
                 T +  R+F + P N      +    + SYR+LP+ L    + +R+E      G+
Sbjct: 96  F-----TDRGERSFVIGPTNEEAITDLMRREVTSYRQLPLNLYHIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKI-HNLIISIYKDFGFEKIMVKLST 429
           MR R F   DA+ F   ++   +  ++ +    +I+   G +   V+  T
Sbjct: 150 MRSREFIMKDAYSFHMDKESLQQTYEVMYQTYSNIFTRLGLDFRAVQADT 199


>gi|53680543|gb|AAU89472.1| theronyl tRNA synthatase-like protein [Aedes aegypti]
          Length = 301

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 73/129 (56%), Gaps = 4/129 (3%)

Query: 5   IKLTFPDGS-IKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           IK+T PDG  +      +T  DVA+ IS  LA   V   +N ++ DL  P+  +  ++++
Sbjct: 56  IKVTLPDGKEVDATSWESTPYDVAKGISXGLADNTVIARVNNELWDLDRPLEGDCKLQLL 115

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQ 121
             +DP + AV  HS AHI+ EA++  +    +  GP IE+GFYYD F +    S+ +   
Sbjct: 116 KFDDPDAQAVFWHSSAHILGEAMEKRY-GGHLCYGPPIENGFYYDMFLEGSGISNQDYGA 174

Query: 122 IEKKMQEII 130
           +E ++++I+
Sbjct: 175 LESEVKKIV 183


>gi|70607289|ref|YP_256159.1| prolyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
 gi|114152265|sp|Q4J8L4|SYP_SULAC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|68567937|gb|AAY80866.1| bifunctional aminoacyl-tRNA synthetase [Sulfolobus acidocaldarius
           DSM 639]
          Length = 483

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 95/390 (24%), Positives = 172/390 (44%), Gaps = 67/390 (17%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSG-HWDSYRANMFAV 321
           G+  W   G+KI Q  +  +R+ +    +EE+  P ++ + L ++ G H   + + +F V
Sbjct: 35  GMGVWLPYGFKIRQAAVDLIRKLLDAKGHEEVLFPLLVPEDLLRREGEHIKGFESEVFWV 94

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
               +   D+R  AL+P +      +  + ++SY++LP +  +  SV+R E   +   ++
Sbjct: 95  TKGGEENLDIR-LALRPTSETAITYMETYWVQSYKQLPKKYYQIVSVFRYETKAT-RPMI 152

Query: 382 RVRGF-TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK--LSTRPEKRVGSD 438
           R+R   T  +AH   T  + + +  +     I IYK+F FE++ +   +S RPE      
Sbjct: 153 RLREVSTFKEAH---TLHETYEDAERQVKEAIEIYKNF-FEELGIPYIMSQRPE------ 202

Query: 439 ALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
             WD                             GA Y   F+ I+ D+  R  Q GT+  
Sbjct: 203 --WDKF--------------------------AGAIYTIAFDTIMPDS--RVLQIGTVH- 231

Query: 499 DFNLPSRFN-AFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-----LPLWLSP 552
             +L   F  AF +    +       H+  +G  +R I + + +  G+     L   L+P
Sbjct: 232 --HLGQHFTKAFDLKVQRKDGTLDYPHQTSYGISDRVIAVAV-SINGDDHGTILSPVLAP 288

Query: 553 IQAIVTTI-------TSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIP 604
           I+A++  I       T   +EY++++A +L S+ ++   D   E T   K     IK +P
Sbjct: 289 IKAVIIPIPAKDEKETEKIIEYSEDVAKILVSNGINTVIDKDTEKTPGEKYYIWEIKGVP 348

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           + I  G +E S  S+ I+R    T Q +S+
Sbjct: 349 LRIEIGPRELSSNSVFIKR--RDTLQGISV 376


>gi|291566398|dbj|BAI88670.1| prolyl-tRNA synthetase [Arthrospira platensis NIES-39]
          Length = 601

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 82/171 (47%), Gaps = 13/171 (7%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+E   H+ L R     +I   GSGV  +    W++ Q +   +R ++     +E   PQ
Sbjct: 17  EAEIPSHKLLLRA---GYIRRIGSGVYAYLPLMWRVLQKVSQIVREEMNATGAQECLLPQ 73

Query: 299 VLDQHLWQQSGHWDSY---RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           V    LW++SG WD+Y      MF++K   D     R+ AL P +     AV    ++SY
Sbjct: 74  VQPSELWKESGRWDTYTKAEGIMFSLKDRRD-----RSLALGPTHEEVITAVARDMIRSY 128

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           ++LP+ L +  + +R+E      GLMR R F   D + F T E+   +  +
Sbjct: 129 QQLPLHLYQIQTKFRDEIRPRF-GLMRGREFIMKDGYSFHTSEESLKQTYQ 178


>gi|251772092|gb|EES52662.1| prolyl-tRNA synthetase [Leptospirillum ferrodiazotrophum]
          Length = 429

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 85/360 (23%), Positives = 143/360 (39%), Gaps = 36/360 (10%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           EI  P +    +W+++G W+ Y   +F +     T +  R+FAL P +      + +  L
Sbjct: 68  EILMPALQPAEMWEKTGRWEKYGKELFRL-----TDRHDRSFALGPTHEEVVTELASGLL 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI-HNLI 411
            SYR+LPV L +  + +R+E      GLMR R F   DA+ F   ++   EC +I     
Sbjct: 123 NSYRQLPVTLYQIQTKFRDEMRPRF-GLMRGREFVMKDAYSFARSKEEGAECYRIMQEAY 181

Query: 412 ISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL--DTIKNSSQDRINTGVLL 469
             I+   G    MV+  T      G+   +   E ++      DT+      R  + V L
Sbjct: 182 FRIFARLGLSVRMVEADT------GNIGGYSSHEFMVLAPSGEDTVVFCGSCRYASNVEL 235

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTIQVD--FNLPSRFNA-FYVNSHSEKCHPVMIHRA 526
              A + P  +  L+       +   I+V   F+L  R++A              + H  
Sbjct: 236 AGAATHCPLCQAPLE-------RTTAIEVGHVFDLGDRYSAPMEAGFLDPDGRETLFHMG 288

Query: 527 VFG-SIERFIGIMIENFKGNL----PLWLSPIQAIVTTITSSAVEYAQE---IANLLKSH 578
            +G  + R +   IE    +     P  ++P    V  +     E +++   IA LL+  
Sbjct: 289 CYGIGVSRLLAAAIEQSHDDAGIIWPTAMAPFAVAVLPLGGRDAELSEKALRIAGLLEER 348

Query: 579 HL-SIETDFRNETINYKIREHSIKKIPIIIICGDKEASER--SIGIRRFGSTTTQKVSLL 635
               +  D R+     K  +  +   PI +I G+K   E    I +R  G   T  +S L
Sbjct: 349 FPEEVLVDDRDLRAGVKFADADLCGFPIQVILGEKGLRENRAEIKVRSSGERNTVDLSAL 408


>gi|308233721|ref|ZP_07664458.1| prolyl-tRNA synthetase [Atopobium vaginae DSM 15829]
          Length = 575

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 71/148 (47%), Gaps = 7/148 (4%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  +G+  +    W+  Q + S +R +++  D +E+  P + D  LW QSG W +Y  
Sbjct: 36  IRKAAAGLYSYLPLAWRSIQKIESIIREEMEAIDAQEMLAPILTDAELWHQSGRWGAYGP 95

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            +  +     T +    +AL P +      +  + LKSY++LPV L      +R+E    
Sbjct: 96  ELMRL-----TDRHDHEYALGPTHEETFTDLIRNELKSYKDLPVTLYHIQDKFRDERRPR 150

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             GLMR R F   D + FC  ++  +EC
Sbjct: 151 F-GLMRGREFIMKDGYSFCANQESLHEC 177


>gi|328944057|ref|ZP_08241522.1| proline--tRNA ligase [Atopobium vaginae DSM 15829]
 gi|327492026|gb|EGF23800.1| proline--tRNA ligase [Atopobium vaginae DSM 15829]
          Length = 616

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 71/148 (47%), Gaps = 7/148 (4%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  +G+  +    W+  Q + S +R +++  D +E+  P + D  LW QSG W +Y  
Sbjct: 77  IRKAAAGLYSYLPLAWRSIQKIESIIREEMEAIDAQEMLAPILTDAELWHQSGRWGAYGP 136

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            +  +     T +    +AL P +      +  + LKSY++LPV L      +R+E    
Sbjct: 137 ELMRL-----TDRHDHEYALGPTHEETFTDLIRNELKSYKDLPVTLYHIQDKFRDERRPR 191

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             GLMR R F   D + FC  ++  +EC
Sbjct: 192 F-GLMRGREFIMKDGYSFCANQESLHEC 218


>gi|284051766|ref|ZP_06381976.1| prolyl-tRNA synthetase [Arthrospira platensis str. Paraca]
          Length = 601

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 81/171 (47%), Gaps = 13/171 (7%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+E   H+ L R     +I   GSGV  +    W++ Q +   +R ++     +E   PQ
Sbjct: 17  EAEIPSHKLLLRA---GYIRRIGSGVYAYLPLMWRVLQKVSQIVREEMNATGAQECLLPQ 73

Query: 299 VLDQHLWQQSGHWDSY---RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           V    LW++SG WD+Y      MF++K   D     R+ AL P +     AV    ++SY
Sbjct: 74  VQPSELWKESGRWDTYTKAEGIMFSLKDRRD-----RSLALGPTHEEVITAVARDMIRSY 128

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           ++LP+ L +  + +R+E      GLMR R F   D + F T E    +  +
Sbjct: 129 QQLPLHLYQIQTKFRDEIRPRF-GLMRGREFIMKDGYSFHTSEDSLKQTYQ 178


>gi|209525764|ref|ZP_03274300.1| prolyl-tRNA synthetase [Arthrospira maxima CS-328]
 gi|209493737|gb|EDZ94056.1| prolyl-tRNA synthetase [Arthrospira maxima CS-328]
          Length = 601

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 81/171 (47%), Gaps = 13/171 (7%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+E   H+ L R     +I   GSGV  +    W++ Q +   +R ++     +E   PQ
Sbjct: 17  EAEIPSHKLLLRA---GYIRRIGSGVYAYLPLMWRVLQKVSQIVREEMNATGAQECLLPQ 73

Query: 299 VLDQHLWQQSGHWDSY---RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           V    LW++SG WD+Y      MF++K   D     R+ AL P +     AV    ++SY
Sbjct: 74  VQPSELWKESGRWDTYTKAEGIMFSLKDRRD-----RSLALGPTHEEVITAVARDMIRSY 128

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           ++LP+ L +  + +R+E      GLMR R F   D + F T E    +  +
Sbjct: 129 QQLPLHLYQIQTKFRDEIRPRF-GLMRGREFIMKDGYSFHTSEDSLKQTYQ 178


>gi|332159170|ref|YP_004424449.1| prolyl-tRNA synthetase [Pyrococcus sp. NA2]
 gi|331034633|gb|AEC52445.1| prolyl-tRNA synthetase [Pyrococcus sp. NA2]
          Length = 480

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 87/396 (21%), Positives = 162/396 (40%), Gaps = 67/396 (16%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVL-DQHLWQQSGHWDSYRANMFA 320
            G+  W   G KI + +  ++  ++ +  ++E+  P ++ +    +++ H   +   +F 
Sbjct: 32  KGMNVWLPYGLKIMRNIERFIHEEMERTGHQEVLFPALIPETEFKKEAEHIAGFEGEVFW 91

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           V  A     D+R   L+P +     ++F   ++S+ +LP+++ +  +VYR E +     L
Sbjct: 92  VTHAGHEPLDVR-LILRPTSETAMYSMFALWIRSHADLPLKVYQIVNVYRYE-TKHTRPL 149

Query: 381 MRVRG----FTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
           +RVR     F    AHV F   E+   E L+I +   ++ K      I   +S RPE   
Sbjct: 150 IRVREISRFFEAHTAHVDFEDAERQIREDLEIFD---NLMKKLAIAYI---ISKRPE--- 200

Query: 436 GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGT 495
                WD                             GA+Y    E ++ D  GR  Q GT
Sbjct: 201 -----WDKFP--------------------------GAYYSLGAEVVMPD--GRTLQIGT 227

Query: 496 IQVDFNLPSRF-NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWL 550
           +    N    F  A+ +    E      +H+  FG  ER +  +I     +    LP  +
Sbjct: 228 MH---NYKQNFAKAYNIMYEKEDGTHDYVHQTTFGMSERLLAAVIAIHGDDRGIVLPPTI 284

Query: 551 SPIQAIVTTITSSAVE-----YAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPI 605
           +PIQ ++  I     E     YA+EI   LK   + +  D R++   +K  +  +K +P+
Sbjct: 285 APIQVVIVPIPKKGSEEEVYKYAKEIEEELKMAGIRVHLDLRDKRPGWKFYDWELKGVPV 344

Query: 606 IIICGDKEASERSIGIRR---FGSTTTQKVSLLDAI 638
            +  G  +    ++ + R       T ++  L+D +
Sbjct: 345 RVEVGPIDVQNSTVVLARRDKLEKITVKREELVDRV 380


>gi|303232756|ref|ZP_07319441.1| proline--tRNA ligase [Atopobium vaginae PB189-T1-4]
 gi|302481242|gb|EFL44317.1| proline--tRNA ligase [Atopobium vaginae PB189-T1-4]
          Length = 574

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 74/160 (46%), Gaps = 10/160 (6%)

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHL 304
           HR L R      I +  SG+  +    W+    +   +R +++  D +E+ TP +    L
Sbjct: 27  HRLLCRA---GMIRKAASGLYTYLPLAWRSILKIEGIIRDEMEAIDCQEMLTPILTSAEL 83

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W QSG WD Y   +  +     T +    +AL P +   +V +    L+SY++LPV L  
Sbjct: 84  WHQSGRWDVYGPELMRL-----TDRHDHEYALGPTHEETYVDLVRSELRSYKQLPVTLYH 138

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
               +R+E      GLMR R F   DA+ FC  ++   +C
Sbjct: 139 IQDKFRDERRPRF-GLMRSREFIMKDAYSFCATQESLQQC 177


>gi|331701343|ref|YP_004398302.1| Prolyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
 gi|329128686|gb|AEB73239.1| Prolyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
          Length = 569

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 48/187 (25%), Positives = 95/187 (50%), Gaps = 14/187 (7%)

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQV 299
           +E   H+ L R     +I +  +G+  +    +++   + + +R+++ K    E+  P +
Sbjct: 18  AEALSHQMLVRG---GYIRQISAGMYAYLPLAYRVLNKIETIIRQEMEKTSAHEMLMPDI 74

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           L   LW++SG +D+Y   +F  K   +T      F L P +     A+    +KSY++LP
Sbjct: 75  LPADLWKESGRYDTYGPELFKFKNRHET-----DFILGPTHEETFTALIRDSIKSYKQLP 129

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           + L +  + YR+E +   +GL+R R F   DA+ F T ++  +   K +N +   Y++  
Sbjct: 130 LVLYQIQNKYRDE-NRPRYGLLRSREFIMKDAYSFATNDEDLD---KTYNAMEQAYRNI- 184

Query: 420 FEKIMVK 426
           F++I +K
Sbjct: 185 FDRIGLK 191


>gi|160902880|ref|YP_001568461.1| phosphoribulokinase/uridine kinase [Petrotoga mobilis SJ95]
 gi|160360524|gb|ABX32138.1| phosphoribulokinase/uridine kinase [Petrotoga mobilis SJ95]
          Length = 553

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 85/184 (46%), Gaps = 4/184 (2%)

Query: 25  DVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIRHSCAHIMAE 83
           D+A+   +S  K  + V  N  + +L   V + GSI+      P  + + R     ++  
Sbjct: 24  DIAKKFEKSSGKMVLYVKFNNDIKELFSKVPKSGSIQFCDITTPDGVRIYRRGLFFVLYI 83

Query: 84  AVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSH 143
           A++ I PE +  +   + D  Y +F   +P S D L  +E KM+EII +D  F K+ +  
Sbjct: 84  ALKEINPEDKFYVNNTLNDAMYCEFKSGEP-SEDYLLLLENKMREIIEKDIVFEKKTIDK 142

Query: 144 EKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKV 203
             A ++F    E  K  +L     K  V +Y   ++F+   G    STG V K FKL KV
Sbjct: 143 FDAIKMFTDIGEEDKA-LLFKYRKKSTVNIYYADKYFNYFYGYLPYSTGYVNK-FKLKKV 200

Query: 204 AGAY 207
              +
Sbjct: 201 EKGF 204


>gi|153956193|ref|YP_001396958.1| hypothetical protein CKL_3596 [Clostridium kluyveri DSM 555]
 gi|219856518|ref|YP_002473640.1| hypothetical protein CKR_3175 [Clostridium kluyveri NBRC 12016]
 gi|146349051|gb|EDK35587.1| Conserved hypothetical protein containing an uridine kinase domain
           [Clostridium kluyveri DSM 555]
 gi|219570242|dbj|BAH08226.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 571

 Score = 68.2 bits (165), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 78/160 (48%), Gaps = 2/160 (1%)

Query: 39  VAVAINGKVCDLSDPVREGSI-EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIG 97
           V   +NGK  + ++ ++E  I E +  +DP        +   ++ +AV  ++PE +V I 
Sbjct: 58  VLAKVNGKYYEFTNSLQESGIFETVDIKDPLGNKTYIRTLQFVLIKAVYDLFPEARVVIE 117

Query: 98  PIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAY 157
             +  G + +  K  P S +++  I+ KM EII +D    K  +  E+A E+F S     
Sbjct: 118 HSLSKGIFGEIHKNTPLSREDIKLIKDKMDEIIKKDMYIKKVEMKKEEAIEIFRSYHMED 177

Query: 158 KVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
           K+ +L+ I A E V LY     +D   G    STG +K +
Sbjct: 178 KITLLKHINA-EKVKLYELDGRYDYFYGSMAFSTGVLKLY 216


>gi|326427807|gb|EGD73377.1| hypothetical protein PTSG_11497 [Salpingoeca sp. ATCC 50818]
          Length = 338

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 62/275 (22%), Positives = 124/275 (45%), Gaps = 27/275 (9%)

Query: 18  PVH---ATGSDVAESISRSLAKKA--VAVAINGKVCDLSDPVREGS-IEII---TPEDPR 68
           P H   A+ + V   + R ++ +    A  +NG + DL  P+ +   ++ +   T  D  
Sbjct: 48  PAHVIAASHTTVPAQLMRGISNRNQIAACRVNGHLWDLMRPLTDTCHLQFLFWDTDWDYG 107

Query: 69  SLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIE--DGFYYD--FDKEQPFSSDELAQIE 123
              +  HS AH++  A++ ++  ++ +  GP ++   GF+Y+      Q  ++D LAQ+E
Sbjct: 108 LKEMCWHSGAHVLGAALEEVYGDDILLCDGPPVKRGAGFFYEGHLKHGQTVNTDALAQVE 167

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K M E+        +  ++ E+A ++F                 + ++++Y+   + DLC
Sbjct: 168 KHMHELCRLQHDLQRIDVTPEQALDVFCDNPFKQHFIHRAQQQGETSISIYKLASFVDLC 227

Query: 184 RGPHVRSTGQV-KKFFKLMKVAGAY--WRG---------DSNRPMLSRIYGTAWNTQQEL 231
            GPH+R+      K   L   + A   W G         D++ P L+R YG  + ++Q  
Sbjct: 228 EGPHIRNLRPFSSKTIALTSTSQAEFDWSGREEMKPDNWDTHTP-LTRTYGICFPSKQMF 286

Query: 232 TQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVI 266
             +   +EE EK +H  + + + +F   +   G +
Sbjct: 287 RHWKRDVEEREKYNHSAVGKSLSIFMQHDTSPGPV 321


>gi|18313148|ref|NP_559815.1| prolyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
 gi|74580888|sp|Q8ZVQ9|SYP_PYRAE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|18160660|gb|AAL63997.1| prolyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
          Length = 488

 Score = 67.8 bits (164), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 99/416 (23%), Positives = 169/416 (40%), Gaps = 69/416 (16%)

Query: 249 LAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD--YEEINTPQVLDQHLW- 305
           L RE +L+ +     G   W   G KI +  +  + RK  D+  +EE+  P  +    + 
Sbjct: 26  LLREAELYDVRYPVKGAYVWRPYGMKIRRN-VENLIRKFHDETGHEEVLFPVFIPYEFFG 84

Query: 306 QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEF 365
           ++S H   +   +F V    +  + L    L+P +    + +    ++ Y++LP+R+ + 
Sbjct: 85  KESQHIKGFEKEVFWVSKGGEAGERL---VLRPTSETAIMPMVKLWIQDYKDLPLRVYQI 141

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQ-DDAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
            SV+R E   + H ++R+R  +   +AH V   KE    +  +     + IYK    E  
Sbjct: 142 VSVFRAETKMT-HPMIRLREISMFKEAHTVHADKEDAERQVRE----AVEIYKRIFDEMC 196

Query: 424 MVKL-STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           +  L + RPE        WD                             GA Y   F+ I
Sbjct: 197 LAYLINKRPE--------WDKF--------------------------AGAEYTIAFDTI 222

Query: 483 LKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI-- 539
           L D  GR  Q GT+  +  N    F   Y+++   +    + H   +G  ER I  M+  
Sbjct: 223 LPD--GRSLQIGTVHYLGTNFTKVFEVTYLDADGTRK---LAHTTSYGISERSIAAMLIT 277

Query: 540 --ENFKGNLPLWLSPIQAIVTTITSSAVE------YAQEIANLLKSHHLSIETDFR-NET 590
             ++    LP  L+PIQ +V  I     E        +E AN L    + +  D R ++T
Sbjct: 278 HGDDGGTTLPPKLAPIQVVVIPIYYGEEEAPLVMPLVRETANRLNEAGIRVYVDERADKT 337

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS---LLDAIPILTK 643
             +K     +K +P+ +  G ++  +R   I R  +     VS   L+DA+  L K
Sbjct: 338 PGWKFYYWELKGVPLRVEIGKRDVEKRQAVIARRDTLEKYAVSINELVDAVKQLMK 393


>gi|150015022|ref|YP_001307276.1| prolyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
 gi|189083493|sp|A6LPP0|SYP_CLOB8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|149901487|gb|ABR32320.1| prolyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
          Length = 570

 Score = 67.8 bits (164), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 87/184 (47%), Gaps = 11/184 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E   H+ + R   +  +A   +GV  +   G K+ + +   +R ++     +E     
Sbjct: 17  EAEIDSHKLMLRAGMIRKMA---AGVYNYMPLGLKVLKKVEDIIREEMNAAGAQEFLASA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++   LWQ+SG WD+Y A MF +K   D     R F L P +      +  + +KSY++L
Sbjct: 74  IIPAELWQESGRWDAYGAEMFRLKDRGD-----RDFCLGPTHEEVFTDIARNEIKSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKD 417
           P+ L +  + YR+E      G+MR R F   DA+ F   +   +    K+H+  + I+  
Sbjct: 129 PLNLYQIQTKYRDERRPRF-GVMRSREFVMKDAYSFDKDQGGLDLAYDKMHDAYVKIFNR 187

Query: 418 FGFE 421
            G +
Sbjct: 188 CGLD 191


>gi|169344114|ref|ZP_02865097.1| prolyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
 gi|169297725|gb|EDS79824.1| prolyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
          Length = 570

 Score = 67.8 bits (164), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 78/156 (50%), Gaps = 10/156 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E   H+ + R   +  +A   +G+  +   G K+ + + + +R ++ +   +E   P 
Sbjct: 17  EAEIESHKLMLRAGLMRKMA---AGIYNYMPLGLKVIENVKNIVREEMNNAGAQEFLAPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++   LWQ+SG WD+Y A MF +K   +     R F L P +      +  + +KSY++L
Sbjct: 74  LIPAELWQESGRWDAYGAEMFRLKDRHN-----RDFCLGPTHEEVFTDIVRNEIKSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           P+ L +  + YR+E      G+MR R F   D + F
Sbjct: 129 PLNLYQIQTKYRDERRPRF-GVMRSREFIMKDGYSF 163


>gi|182420015|ref|ZP_02951249.1| prolyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237666786|ref|ZP_04526771.1| proline--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262]
 gi|182376052|gb|EDT73639.1| prolyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237657985|gb|EEP55540.1| proline--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262]
          Length = 570

 Score = 67.4 bits (163), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 91/188 (48%), Gaps = 19/188 (10%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E   H+ + R   +  +A   +G+  +   G K+ + +   +R ++     +E     
Sbjct: 17  EAEIDSHKLMLRAGMIRKMA---AGIYNYMPLGLKVLKNVEDIVREEMNAAGAQEFLASA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++   LWQ+SG WD+Y A MF VK      +  R F L P +      +  + +KSY++L
Sbjct: 74  MIPAELWQESGRWDAYGAEMFRVK-----DRGARDFCLGPTHEEVFTDIARNEIKSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQ-----MFNECLKIHNLIIS 413
           P+ L +  + YR+E      G+MR R F   DA+ F  K+Q     +FN   K+H+  + 
Sbjct: 129 PLNLYQIQTKYRDERRPRF-GVMRSREFIMKDAYSF-DKDQDGLDIVFN---KMHDAYVK 183

Query: 414 IYKDFGFE 421
           I+   G +
Sbjct: 184 IFNRCGLD 191


>gi|28210102|ref|NP_781046.1| uridine kinase [Clostridium tetani E88]
 gi|28202538|gb|AAO34983.1| uridine kinase [Clostridium tetani E88]
          Length = 552

 Score = 67.4 bits (163), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 60/231 (25%), Positives = 106/231 (45%), Gaps = 25/231 (10%)

Query: 22  TGSDVAESISRSLAKKAVAVAINGKVCDLSDP-VREGSIEII-TPEDPRSLAVIRHSCAH 79
           T  D+ E+I        V   +NGKV +L+ P V EG +E I    D  + A IR +   
Sbjct: 21  TLRDILENIHVENKFPIVLGEMNGKVYELNSPIVEEGQLEFIDLGSDTGNRAYIR-TLQF 79

Query: 80  IMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQ 139
           I+ +A    +P   ++I   +  G Y +  K +  +  EL +I+ +M+EII +D P  ++
Sbjct: 80  ILIKATLEEFPGANISIQHSLSKGLYCEISKGKILTEKELEKIKARMKEIIYKDMPIKEE 139

Query: 140 YLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFK 199
           Y + E+  E+ +      ++++L ++   + + LY     ++   GP   STG +++F  
Sbjct: 140 YFTKEETMEMLKKYNMNDRIKLLSNLQL-DKIKLYELDGVYEYFYGPMGESTGIIREFDL 198

Query: 200 LMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLA 250
           +    G   R               + T++E  +   FLE      HRKLA
Sbjct: 199 MYYEPGFILR---------------YPTKEEPDRLPVFLE------HRKLA 228


>gi|76156813|gb|AAX27938.2| SJCHGC03429 protein [Schistosoma japonicum]
          Length = 218

 Score = 67.4 bits (163), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 40/108 (37%), Positives = 61/108 (56%), Gaps = 3/108 (2%)

Query: 3   SDIKLTFPDGSIKNFPV-HATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIE 60
           S I++T PDG+I +      T  +VA+SIS++LA+ AV   +NG++ DL  P  +  S+E
Sbjct: 70  SPIQITLPDGTILDAKAWETTPMEVAKSISKTLAEHAVIAKVNGELWDLLRPFEKSSSLE 129

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF 108
           I          V  HS AH++ EA++       +  GP +E+GFYYD 
Sbjct: 130 IYNFNHKDGQYVFWHSSAHVLGEALERC-CSGHLCYGPPVEEGFYYDM 176


>gi|187933014|ref|YP_001884453.1| prolyl-tRNA synthetase [Clostridium botulinum B str. Eklund 17B]
 gi|226699132|sp|B2TIF5|SYP_CLOBB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|187721167|gb|ACD22388.1| proline--tRNA ligase [Clostridium botulinum B str. Eklund 17B]
          Length = 570

 Score = 67.0 bits (162), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 87/184 (47%), Gaps = 11/184 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E   H+ + R   +  +A   SG+  +   G K  + +   +R ++ +   +E     
Sbjct: 17  EAEIDSHKLMLRSGMIRKMA---SGIYNYMPLGLKALKKVEDIIREEMNEAGAQEFLASA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++   LWQ SG WD+Y A MF VK  ++     R F L P +      +  + +KSY++L
Sbjct: 74  MIPAELWQSSGRWDAYGAEMFRVKDRNE-----RDFCLGPTHEEVFTDIAKNEIKSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKD 417
           PV L +  + YR+E      G+MR R F   DA+ F   +Q  +    K++   + I+  
Sbjct: 129 PVNLYQIQTKYRDERRPRF-GVMRSREFVMKDAYSFDKDQQGLDLSYNKMYEAYVKIFNR 187

Query: 418 FGFE 421
            G +
Sbjct: 188 CGLD 191


>gi|320160514|ref|YP_004173738.1| phosphoribulokinase/uridine kinase family protein [Anaerolinea
           thermophila UNI-1]
 gi|319994367|dbj|BAJ63138.1| phosphoribulokinase/uridine kinase family protein [Anaerolinea
           thermophila UNI-1]
          Length = 586

 Score = 67.0 bits (162), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 50/209 (23%), Positives = 103/209 (49%), Gaps = 5/209 (2%)

Query: 2   PSD-IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           PSD + +  PDG + +           + +        V   +N ++ +LS  + RE  +
Sbjct: 25  PSDEVLIHLPDGRVLSGKRGTELEAFMQRLENWRDPLVVGAIVNRELRELSFKIWRESDV 84

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIG-PIIEDGFYYDFDKEQPFSSDE 118
             +T +D     + R S   ++  A +  +P+V + +   ++  G++      +P + +E
Sbjct: 85  TPVTLKDTDGARIYRRSLVFLLETAFEEQFPDVHLTVDHSVVSGGYFCQVRGREPLTVEE 144

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L +++++M+E++ +D  F +  +S ++A ELFE + ++ KV +L+  P K+ + LY  G 
Sbjct: 145 LKRLKQRMKELVRQDLRFERFVISKQEAIELFEQQNKSDKVRLLKYRP-KDQLVLYSLGH 203

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAY 207
             D   G  V STG + ++F L    G +
Sbjct: 204 HKDYHHGYMVPSTGYL-QWFDLKAQPGGF 231


>gi|251778178|ref|ZP_04821098.1| proline--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
 gi|243082493|gb|EES48383.1| proline--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
          Length = 570

 Score = 67.0 bits (162), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 87/184 (47%), Gaps = 11/184 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E   H+ + R   +  +A   SG+  +   G K  + +   +R ++ +   +E     
Sbjct: 17  EAEIDSHKLMLRSGMIRKMA---SGIYNYMPLGLKALKKVEDIIREEMNEAGAQEFLASA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++   LWQ SG WD+Y A MF VK  ++     R F L P +      +  + +KSY++L
Sbjct: 74  MIPAELWQSSGRWDAYGAEMFRVKDRNE-----RDFCLGPTHEEVFTDIAKNEIKSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKD 417
           PV L +  + YR+E      G+MR R F   DA+ F   +Q  +    K++   + I+  
Sbjct: 129 PVNLYQIQTKYRDERRPRF-GVMRSREFVMKDAYSFDKDQQGLDLSYNKMYEAYVKIFNR 187

Query: 418 FGFE 421
            G +
Sbjct: 188 CGLD 191


>gi|188587611|ref|YP_001919651.1| prolyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43]
 gi|226699131|sp|B2UY89|SYP_CLOBA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|188497892|gb|ACD51028.1| prolyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43]
          Length = 570

 Score = 67.0 bits (162), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 87/184 (47%), Gaps = 11/184 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E   H+ + R   +  +A   SG+  +   G K  + +   +R ++ +   +E     
Sbjct: 17  EAEIDSHKLMLRSGMIRKMA---SGIYNYMPLGLKALKKVEDIIREEMNEAGAQEFLASA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++   LWQ SG WD+Y A MF VK  ++     R F L P +      +  + +KSY++L
Sbjct: 74  MIPAELWQSSGRWDAYGAEMFRVKDRNE-----RDFCLGPTHEEVFTDIAKNEIKSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKD 417
           PV L +  + YR+E      G+MR R F   DA+ F   +Q  +    K++   + I+  
Sbjct: 129 PVNLYQIQTKYRDERRPRF-GVMRSREFVMKDAYSFDKDQQGLDLSYNKMYEAYVKIFNR 187

Query: 418 FGFE 421
            G +
Sbjct: 188 CGLD 191


>gi|14521178|ref|NP_126653.1| prolyl-tRNA synthetase [Pyrococcus abyssi GE5]
 gi|74581662|sp|Q9V022|SYP_PYRAB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|5458396|emb|CAB49884.1| proS prolyl-tRNA synthetase [Pyrococcus abyssi GE5]
          Length = 480

 Score = 67.0 bits (162), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 84/396 (21%), Positives = 161/396 (40%), Gaps = 67/396 (16%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVL-DQHLWQQSGHWDSYRANMFA 320
            G+  W   G KI + +  ++  ++ +  ++E+  P ++ +    +++ H   +   +F 
Sbjct: 32  KGMNVWLPYGLKIMKNIEKFIHEEMERTGHQEVLFPALIPETEFKKEAEHIAGFEGEVFW 91

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +  A     D++   L+P +     ++F   ++S+ +LP ++ +  +VYR E +     L
Sbjct: 92  ITHAGHEPLDVK-LILRPTSETAMYSMFALWIRSHADLPFKVYQIVNVYRYE-TKHTRPL 149

Query: 381 MRVRG----FTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
           +RVR     F    AH  F   E+   E L+I +   ++ K      I   +S RPE   
Sbjct: 150 IRVREISRFFEAHTAHADFEDAERQIKEDLEIFD---NLMKRLAIAYI---ISKRPE--- 200

Query: 436 GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGT 495
                WD                             GAFY    E ++ D  GR  Q GT
Sbjct: 201 -----WDKFP--------------------------GAFYSLGAEVVMPD--GRTLQIGT 227

Query: 496 IQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWL 550
           +     N    +N  Y        +   +H+  FG  ER +  +I    ++    LP  +
Sbjct: 228 MHNYKQNFAKAYNILYEKEDGTHDY---VHQTTFGMSERLLAAVIAIHGDDRGMVLPPTI 284

Query: 551 SPIQAIVTTITSS-----AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPI 605
           +PIQ ++  I          EYA+EI   L++  + +  D R +   +K  +  +K +P+
Sbjct: 285 APIQVVIVPIPKKEKQEIVYEYAREIEEELRTAGIRVHLDMREKRPGWKFYDWELKGVPV 344

Query: 606 IIICGDKEASERSIGIRR---FGSTTTQKVSLLDAI 638
            I  G ++    ++ + R       T ++  L+D +
Sbjct: 345 RIEVGPRDVENSTVVLARRDKLEKITIKREELVDKV 380


>gi|119872334|ref|YP_930341.1| prolyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
 gi|152112945|sp|A1RSR6|SYP_PYRIL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|119673742|gb|ABL87998.1| prolyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
          Length = 488

 Score = 67.0 bits (162), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 92/415 (22%), Positives = 173/415 (41%), Gaps = 77/415 (18%)

Query: 249 LAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD--YEEINTPQVLDQHLW- 305
           L RE +L+ +     G   W   G K+ + + + +RR I D+  +EE+  P  +    + 
Sbjct: 26  LLREAELYDVRYPVKGAYVWRPYGMKLRRNVENLIRR-IHDETGHEEVLFPVFIPYEFFS 84

Query: 306 QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEF 365
           ++S H   +   +F V    +  + L    L+P +    + +    ++ Y++LP+RL + 
Sbjct: 85  KESQHIRGFEKEVFWVSKGGEGGERL---ILRPTSETAIMPMVKLWIQDYKDLPLRLYQI 141

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
            SV+R E   + H ++R+R  +            MF E   +H                 
Sbjct: 142 VSVFRAETKMT-HPMIRLREIS------------MFKEAHTVH----------------- 171

Query: 426 KLSTRPEKRVGSDALWDDAENIMKGVLDTI-------KNSSQDRINTGVLLGEGAFYGPK 478
             +TR +    ++    +A  I K + D +       K  + D+         GA Y   
Sbjct: 172 --ATRED----AERQIREAVEIYKRIFDEMCLAYMINKRPNWDKFA-------GAEYTIA 218

Query: 479 FEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           F+ IL D  GR  Q GT+  +  N    F   Y++    +    + H   +G  ER I  
Sbjct: 219 FDTILPD--GRTLQIGTVHYLGVNFTKVFEVTYLDIDGTRK---LAHTTSYGISERSIAA 273

Query: 538 MI----ENFKGNLPLWLSPIQAIVTTI------TSSAVEYAQEIANLLKSHHLSIETD-F 586
           M+    ++    LP  L+PIQ ++  I        + +++  E+  +L+   + I  D  
Sbjct: 274 MLITHGDDGGTTLPPKLAPIQVVIVPIFYGEEEMPTVMKFVDEVYRMLRDVGIRIHIDDR 333

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS---LLDAI 638
           R++T  +K     +K +P+ I  G ++  +R + + R  +     VS   L+DA+
Sbjct: 334 RDKTPGWKFYYWELKGVPLRIEVGRRDIEKRQVVVTRRDTLEKYAVSLGELVDAV 388


>gi|325298988|ref|YP_004258905.1| uridine kinase [Bacteroides salanitronis DSM 18170]
 gi|324318541|gb|ADY36432.1| uridine kinase [Bacteroides salanitronis DSM 18170]
          Length = 554

 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/184 (24%), Positives = 88/184 (47%), Gaps = 2/184 (1%)

Query: 15  KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVI 73
           ++FP  +   ++ +    ++    V+  +N KV DL+  V     +E +   +P  +   
Sbjct: 13  RSFPEGSNLLEIYKGFGLNMPYGVVSAKVNNKVEDLNFRVYYNKDVEFLDVTNPSGMRTY 72

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
             S   I+A+AV+ ++P+  +++   +  G+Y D   ++    D++ +I+++MQEII  D
Sbjct: 73  FRSLCFILAKAVEDLYPQGSISLEHPVSKGYYCDLHLDRSIGLDDVIRIKQRMQEIIDAD 132

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQ 193
            PF +      +A E+F       K ++L +   +     YR G   D   G  V STG 
Sbjct: 133 IPFQRIECHTAQAAEMFLHHGMMDKAKLLRTY-DQLYTFYYRLGNTTDCYYGSLVPSTGY 191

Query: 194 VKKF 197
           ++ F
Sbjct: 192 IRLF 195


>gi|224025246|ref|ZP_03643612.1| hypothetical protein BACCOPRO_01980 [Bacteroides coprophilus DSM
           18228]
 gi|224018482|gb|EEF76480.1| hypothetical protein BACCOPRO_01980 [Bacteroides coprophilus DSM
           18228]
          Length = 554

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/189 (24%), Positives = 90/189 (47%), Gaps = 4/189 (2%)

Query: 11  DGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRS 69
           + S K+F   ++  D+ +  +  +    V+  +N KV  L   V     IE +    P  
Sbjct: 9   NNSTKDFAEGSSLLDIYKGFNLQMPYGPVSAKVNNKVESLDFRVYYNKDIEFLDITSPSG 68

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           +     S   I+ +AV+ ++P   +++   +  G++ D    +P   ++++ I+++MQE+
Sbjct: 69  MRTYVRSLCFILVKAVEELYPTGSISLEHPVSKGYFCDLHIGRPVKLEDVSAIKQRMQEL 128

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY-RQGEWFDLCRGPHV 188
           IA D PF +     EK   LF  +    K ++LE+  + +  + Y R G+  D   G  V
Sbjct: 129 IAEDIPFQRIECHTEKVVHLFRERGMTDKAQLLET--SGQLYSYYNRLGDTVDYYYGSLV 186

Query: 189 RSTGQVKKF 197
            STG ++ F
Sbjct: 187 PSTGYIRLF 195


>gi|2415553|emb|CAA04302.1| threonyl-tRNA synthetase [Campylobacter jejuni]
          Length = 87

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 27/52 (51%), Positives = 39/52 (75%)

Query: 78  AHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           AH+MA+A++S++PE +  +GP+IEDGFYYDF  E       L +IEKKM+E+
Sbjct: 1   AHLMAQAIKSLYPEAKFFVGPVIEDGFYYDFRVESKIGEKNLVKIEKKMKEL 52


>gi|16081983|ref|NP_394395.1| prolyl-tRNA synthetase [Thermoplasma acidophilum DSM 1728]
 gi|74581452|sp|Q9HJN0|SYP_THEAC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|10640252|emb|CAC12066.1| prolyl-tRNA synthetase related protein [Thermoplasma acidophilum]
          Length = 462

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 90/405 (22%), Positives = 173/405 (42%), Gaps = 60/405 (14%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAV 321
           G+  W   GWKI   + S +RR + K +++E+N P ++ + + + +  H   +   ++ V
Sbjct: 30  GMNVWLPYGWKIMSLIDSIVRRAVDKRNFQEVNFPILIGRSMLEVEFEHIRGFENEIYWV 89

Query: 322 -KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            K   + +++    AL+P +      +F+  ++S+ +LP+++ +  SVYR E   +    
Sbjct: 90  TKGGKEKLEE--ELALRPTSESAMYPMFSLWIRSHADLPLKIYQIVSVYRYETKHT-RSF 146

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           +R+R             E  F E    H    + Y+D   +    K             +
Sbjct: 147 IRIR-------------EIHFFEAHTAH----ATYEDAEAQMDQYK------------EI 177

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI-QVD 499
           W +  +++       +    D+         GA Y   F+ +L    GR  Q GTI Q  
Sbjct: 178 WREISSLLCLPYFYDQRPDWDKF-------PGAMYTIAFDTVLPS--GRSLQIGTIHQYG 228

Query: 500 FNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTT 559
            N    ++  Y+       +    H+  +G  ER +  +I     +  L L P  A +  
Sbjct: 229 TNFSKNYDIKYLKEDGTFDYA---HQTTYGMSERLLAAIIGIHGDDKGLVLPPDVAPIQV 285

Query: 560 IT-----SSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKE 613
           I      +  +EYA+++ N L S ++ ++ D R N T  YK  +  ++ +P+ I  G++E
Sbjct: 286 IIIPIPGAGVMEYARDVENTLNSINIRVKVDDRENYTPGYKFNDWEMRGVPLRIEIGERE 345

Query: 614 ASER--SIGIRRF-GSTTTQKVSLLDAIP---ILTKESLPPDCQK 652
              R  +I +R   G  T ++  L+  +P   I  +E +  + QK
Sbjct: 346 VKNRTLTISMRNIQGKLTIERSKLIYEVPDTLIRIREKMMENAQK 390


>gi|312623109|ref|YP_004024722.1| prolyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002]
 gi|312203576|gb|ADQ46903.1| prolyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002]
          Length = 572

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/169 (24%), Positives = 86/169 (50%), Gaps = 8/169 (4%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG+  +   G+++ + + + +R ++ K   +E++   ++ + LW++SG W  +   MF V
Sbjct: 37  SGIYVYLPLGYRVLRKIENIVREEMDKSGAQEVHMSALMPKELWEESGRWAVFGPEMFRV 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           K  ++     R + L P +      +  + + SYR+LP  L +  + +R+E      G+M
Sbjct: 97  KDRNE-----REYCLGPTHEEAFTYIVRNEISSYRDLPKILYQIQTKFRDERRPRF-GVM 150

Query: 382 RVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFEKIMVKLST 429
           R R FT  DA+ F   E+  +    K+++  + I+K  G +  +V+  T
Sbjct: 151 RCREFTMKDAYSFDVDEKGLDISYKKMYDAYVRIFKRCGLDVKIVEADT 199


>gi|237807601|ref|YP_002892041.1| prolyl-tRNA synthetase [Tolumonas auensis DSM 9187]
 gi|259511628|sp|C4LBX6|SYP_TOLAT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|237499862|gb|ACQ92455.1| prolyl-tRNA synthetase [Tolumonas auensis DSM 9187]
          Length = 574

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 77/162 (47%), Gaps = 8/162 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++   + + +R ++ K    E++ P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYTWLPTGLRVLHKVEAIVREEMNKAGAIEVSMPVVQPAELWQESGRWEQYGPELCR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +     T +  R F L P +     A+  + + SY++LP+ L +  + +R+E      G+
Sbjct: 96  L-----TDRHNRPFVLGPTHEEVVTALVRYEVNSYKQLPLNLYQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFE 421
           MR R FT  DA+ F   KE +     K+H    +I+   G +
Sbjct: 150 MRGREFTMKDAYSFHMNKESLIETYGKMHQAYCNIFSRMGLD 191


>gi|227824508|ref|ZP_03989340.1| prolyl-tRNA synthetase [Acidaminococcus sp. D21]
 gi|226905007|gb|EEH90925.1| prolyl-tRNA synthetase [Acidaminococcus sp. D21]
          Length = 571

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/166 (28%), Positives = 76/166 (45%), Gaps = 8/166 (4%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
           +I +   G+  +    WK  + +   +R ++   D +EI  P V    +W++SG WD Y 
Sbjct: 31  YIRKIAGGLYTYLPLAWKSIKKIERIIREEMDAIDSQEIMMPIVQPSEIWKESGRWDVYG 90

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
           A MF V+      +  R F L P +      +  + L SYR+LP  L +  S +R+E   
Sbjct: 91  AEMFRVR-----DRHGREFCLGPTHEEMITTLVKNELHSYRQLPTSLYQIQSKFRDEKRP 145

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGF 420
              GLMR R F   DA+ F   E   +E   K+++    I+   G 
Sbjct: 146 RF-GLMRSREFIMKDAYTFDADEAGLDESYQKMYDAYARIFDRCGL 190


>gi|295698550|ref|YP_003603205.1| prolyl-tRNA synthetase [Candidatus Riesia pediculicola USDA]
 gi|291157056|gb|ADD79501.1| prolyl-tRNA synthetase [Candidatus Riesia pediculicola USDA]
          Length = 583

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 80/160 (50%), Gaps = 10/160 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  SG+ +W   G K+ + L S +R+++      E ++P +    LW++SG  D Y  
Sbjct: 32  IRKLSSGIYYWLPTGVKVIEKLKSIIRKEMDSIGLIEFSSPLIQPMKLWKKSGRLDQYGE 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            +F +   +D  +  R F L P N    + +  H ++SY++LP+ L +  + +R+E    
Sbjct: 92  ELFRI---ND--RKSRPFILSPTNEESIIYLMKHEIQSYKQLPISLYQIRTKFRDELRPQ 146

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
             G++R + F   DA+ F T  Q      K + +++  YK
Sbjct: 147 F-GIIRSKEFIMKDAYSFHTNLQSLQ---KTYEMMLDTYK 182


>gi|254505786|ref|ZP_05117932.1| threonyl-tRNA synthetase [Vibrio parahaemolyticus 16]
 gi|219551439|gb|EED28418.1| threonyl-tRNA synthetase [Vibrio parahaemolyticus 16]
          Length = 91

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/87 (37%), Positives = 55/87 (63%), Gaps = 2/87 (2%)

Query: 7  LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
          +T PDGS + F    +  +VA+SI   LAK  +A  ++G+  D  D + ++ S+EIIT +
Sbjct: 4  ITLPDGSQRQFDNPVSTLEVAQSIGPGLAKATIAGRVDGERVDACDLIAQDASLEIITVK 63

Query: 66 DP-RSLAVIRHSCAHIMAEAVQSIWPE 91
          D    L ++RHSCAH++  A++ ++PE
Sbjct: 64 DEVDGLEIVRHSCAHLLGHAIKQLYPE 90


>gi|187933922|ref|YP_001887296.1| uridine kinase [Clostridium botulinum B str. Eklund 17B]
 gi|187722075|gb|ACD23296.1| putative threonyl-tRNA synthetase/uridine kinase [Clostridium
           botulinum B str. Eklund 17B]
          Length = 548

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 77/164 (46%), Gaps = 2/164 (1%)

Query: 35  AKKAVAVAINGKVCDLSDPVRE-GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQ 93
            K      +NGK  +L D V E G IE IT      L +   +   I  +A   ++P  +
Sbjct: 30  VKNIALCKLNGKYNELRDIVNESGKIETITFNTEMGLNIYTRTLQFIFIKATLDLFPNSK 89

Query: 94  VAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESK 153
           + I   I  G + +  KE+P S +++  I++KM+EII++D P     +S  +A  +F+  
Sbjct: 90  IKIEHSISKGLFGEIIKEKPLSEEDIKLIKEKMKEIISKDVPINSIRISKNEAINIFKKY 149

Query: 154 KEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
               K+ +L+     + V LY     +D   G    STG ++ F
Sbjct: 150 GMEDKISLLQYSNLNQ-VKLYELEGRYDYFYGHMAYSTGVIRAF 192


>gi|119484696|ref|ZP_01619178.1| prolyl-tRNA synthetase [Lyngbya sp. PCC 8106]
 gi|119457514|gb|EAW38638.1| prolyl-tRNA synthetase [Lyngbya sp. PCC 8106]
          Length = 604

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 80/171 (46%), Gaps = 13/171 (7%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+E   H+ L R     +I   GSG+  +    W++ Q +   +R ++     EE   PQ
Sbjct: 17  EAEIPSHKLLVRA---GYIRRIGSGIYAYLPLMWRVLQKVSQIVREEMNATGAEECLLPQ 73

Query: 299 VLDQHLWQQSGHWDSY---RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           V    LWQ+SG WD+Y      MFA++  D   +DL   AL P +      +    ++SY
Sbjct: 74  VQPAELWQESGRWDTYTKAEGIMFALR--DRRNRDL---ALGPTHEEVITTIAKEMIRSY 128

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           ++LP+ L +  + +R+E      GLMR R F   D + F   E+      K
Sbjct: 129 QQLPLHLYQIQTKFRDEIRPRF-GLMRGREFIMKDGYSFHIDEESLKATYK 178


>gi|254171909|ref|ZP_04878585.1| prolyl-tRNA synthetase [Thermococcus sp. AM4]
 gi|214033805|gb|EEB74631.1| prolyl-tRNA synthetase [Thermococcus sp. AM4]
          Length = 483

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 87/395 (22%), Positives = 161/395 (40%), Gaps = 67/395 (16%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSG-HWDSYRANMFAV 321
           G+  W   G KI + + +++R ++ +  +EE+  P ++ +  +Q+   H   +   ++ V
Sbjct: 35  GMNVWLPYGLKIMRNIEAFIRAEMERTGHEEVLFPALIPETEFQKEAEHIKGFEDEVYWV 94

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
             A     D+R   L+P +     ++F+  ++S+ +LP ++ +  +VYR E +     L+
Sbjct: 95  THAGLDPLDVR-LILRPTSETAMYSMFSLWIRSHADLPFKVYQIVNVYRYE-TKHTRPLI 152

Query: 382 RVRG----FTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
           RVR     F    AH  F   E+   E L+I + +        F  +   +S RP+    
Sbjct: 153 RVREISRFFEAHTAHADFEDAERQIKEDLEIFDRLAK------FLALPYIISKRPD---- 202

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
               WD                             GAFY    E ++ D  GR  Q GT+
Sbjct: 203 ----WDKFP--------------------------GAFYSLGAEIMMPD--GRTLQIGTM 230

Query: 497 QVDFNLPSRF-NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLS 551
               N    F  A+ +   +E       H+  FG  ER +  +I     +    LP  ++
Sbjct: 231 H---NYKQNFAKAYNIQYETETGDHEYAHQTTFGMSERLLAAVIAVHGDDSGMVLPPTIA 287

Query: 552 PIQAIVTTITSS-----AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPII 606
           PIQ ++  I           YA+EIA  L+     +  D R+     K  +  +K +P+ 
Sbjct: 288 PIQVVIVPIPKKDANVDVFAYAREIAEELRKAGFRVHVDERDIRPGRKYYDWELKGVPLR 347

Query: 607 IICGDKEASERSIGIRR---FGSTTTQKVSLLDAI 638
           I  G ++   R   + R   F   T ++ ++++ +
Sbjct: 348 IEVGPRDVEGRKAVLARRDTFEKVTVERDAIVEEV 382


>gi|332307477|ref|YP_004435328.1| prolyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332174806|gb|AEE24060.1| prolyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 571

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 17/204 (8%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDLFH--IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-K 288
           +QYL   ++    D   ++ ++ L    + +  SG+  W   G ++   +   +R ++ +
Sbjct: 4   SQYLLSTQKETPADAEVISHQLMLRAGLVRKLASGLYTWLPTGLRVLNKVAQIVREEMDR 63

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
               EI  P V    LWQ+SG WD Y   +  VK      +  R F L P +     A+ 
Sbjct: 64  AGSLEILMPVVQPADLWQESGRWDEYGPELLRVKD-----RHFRDFVLGPTHEEVVTALV 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KI 407
            + + SY++LP+ + +  + +R+E      G+MR R FT  DA+ F     + +ECL K 
Sbjct: 119 KNEVSSYKQLPLNVYQIQTKFRDEVRPRF-GVMRGREFTMKDAYSF----HLSDECLNKT 173

Query: 408 HNLIISIYKDFGFEKIMVKLSTRP 431
           ++ + + Y    FE+I   L  RP
Sbjct: 174 YDEMFAAYCRV-FERI--NLEFRP 194


>gi|220928860|ref|YP_002505769.1| ATPase AAA [Clostridium cellulolyticum H10]
 gi|219999188|gb|ACL75789.1| AAA ATPase [Clostridium cellulolyticum H10]
          Length = 552

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 78/155 (50%), Gaps = 2/155 (1%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSCAH 79
            T  ++++   +      VA  +N  + +LS  ++E + I  +   D   + + R S   
Sbjct: 21  TTLLELSKRFEKEYVSTIVAARVNNDIKELSFEIKENAEISFLDLTDEDGMRIYRRSLYF 80

Query: 80  IMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQ 139
           I   AVQ ++P+ +  I   + +G Y + + +   S D++  +EK+M+EI A   PF K+
Sbjct: 81  IFIMAVQDVFPDRKAVISHPMSNGVYCEINGKDELSEDDVELVEKRMREIAAGKMPFEKK 140

Query: 140 YLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
            +S E AR+L++   +  K E+LE    K  VT Y
Sbjct: 141 EISTESARKLYKESGKLDKYEVLEH-RQKPYVTFY 174


>gi|160902700|ref|YP_001568281.1| prolyl-tRNA synthetase [Petrotoga mobilis SJ95]
 gi|189083505|sp|A9BGA8|SYP_PETMO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|160360344|gb|ABX31958.1| prolyl-tRNA synthetase [Petrotoga mobilis SJ95]
          Length = 582

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 80/169 (47%), Gaps = 8/169 (4%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SGV  +   GWK+ + +   +R ++ K   +EI  P +    LW+ +G W+ Y   +  +
Sbjct: 37  SGVYSYLPLGWKVIRKIEQIVREEMEKIGSQEIMLPIIHPAELWKMTGRWEDYGPELMKL 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           K   D     R F L P +      +  + L+SY++ PV L +  + +R+E      G++
Sbjct: 97  KDRHD-----REFTLGPTHEEIVTFLMKNELRSYKQFPVNLFQIATKFRDEIRPRF-GVL 150

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDFGFEKIMVKLST 429
           R R F   DA+ F T     +E  +  +N   +I K  G + ++V+  T
Sbjct: 151 RAREFIMKDAYTFHTDYNSLHESYQHFYNAYENIIKRIGLKYVVVEADT 199


>gi|270157462|ref|ZP_06186119.1| prolyl-tRNA synthetase [Legionella longbeachae D-4968]
 gi|289164147|ref|YP_003454285.1| Prolyl-tRNA synthetase (Proline--tRNA ligase)(ProRS)(Global RNA
           synthesis factor) [Legionella longbeachae NSW150]
 gi|269989487|gb|EEZ95741.1| prolyl-tRNA synthetase [Legionella longbeachae D-4968]
 gi|288857320|emb|CBJ11147.1| Prolyl-tRNA synthetase (Proline--tRNA ligase)(ProRS)(Global RNA
           synthesis factor) [Legionella longbeachae NSW150]
          Length = 569

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 66/134 (49%), Gaps = 7/134 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           GSG+  W   G K+ + +   +R ++ + +  E+  P V    LWQ++G WD++   +  
Sbjct: 36  GSGLYTWMPLGLKVLRKIEQIVREEMNNINSMEVLMPAVQPAELWQETGRWDTFGGQLLT 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +K ++D     R +   P +      +  H L+SY++LP    +  + +R+E      G+
Sbjct: 96  MKDSND-----REYCFGPTHEEVITDIMRHELQSYKQLPASFYQIQTKFRDEIRPRF-GV 149

Query: 381 MRVRGFTQDDAHVF 394
           MR R F   DA+ F
Sbjct: 150 MRAREFIMKDAYSF 163


>gi|229027206|ref|ZP_04183484.1| Threonyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228734095|gb|EEL84811.1| Threonyl-tRNA synthetase [Bacillus cereus AH1272]
          Length = 101

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/98 (32%), Positives = 60/98 (61%), Gaps = 2/98 (2%)

Query: 550 LSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIII 608
           ++P+Q  V  ++++  V+YA E+A+ L    + +E D R+E + YKIRE  ++K+P +++
Sbjct: 1   MAPVQVKVIPVSNAVHVQYANEVAHKLAQAGIRVEEDIRDEKLGYKIREAQMQKVPYVLV 60

Query: 609 CGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
            GDKE    ++ +R++G   + K+  LDA     KE +
Sbjct: 61  IGDKEMESEAVNVRKYGEEES-KIVELDAFVESMKEEM 97


>gi|58698845|ref|ZP_00373719.1| prolyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|225630527|ref|YP_002727318.1| prolyl-tRNA synthetase [Wolbachia sp. wRi]
 gi|254782927|sp|C0R3N5|SYP_WOLWR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|58534643|gb|EAL58768.1| prolyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|225592508|gb|ACN95527.1| prolyl-tRNA synthetase [Wolbachia sp. wRi]
          Length = 422

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 91/419 (21%), Positives = 169/419 (40%), Gaps = 72/419 (17%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  SG+  W   G  + + +   +R ++ K    E+  P V   +LW++SG +D Y  
Sbjct: 32  IKQIASGIYSWLPLGLLVLKNIEDIIRDEMDKSGAIEVLMPCVQPANLWRESGRYDDYGK 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  +K  D   +D+      P +      +    +KSY++LP+ L +    +R+E    
Sbjct: 92  EMLRIK--DRHEEDM---LFGPTHEEVATDLIRDVVKSYKDLPLCLYQIQWKFRDEVR-P 145

Query: 377 LHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP---- 431
            +G+MR R F   DA+ F    E   N    ++   I I+K  G   I V+  T P    
Sbjct: 146 RYGVMRGREFLMKDAYSFDVDYEGALNSYNLMYKTYIKIFKRMGLTPIGVRADTGPIGGN 205

Query: 432 -------EKRVGSDALW-----------DDAENI--MKGVLDTIKNS-----SQDRINT- 465
                      G   L+           +D E++  +  V D + +      SQ+++N  
Sbjct: 206 LSHEFHILANTGESTLYYDNKFSELLESEDVESLKSIYAVADDMHDPETCPISQEQLNVS 265

Query: 466 -GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIH 524
            G+ +G   ++G K+   +K ++                           S+    V IH
Sbjct: 266 KGIEIGHIFYFGDKYSKPMKASV--------------------------TSQDGKNVNIH 299

Query: 525 RAVFG-SIERFIGIMIENF---KGNL-PLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH 579
              +G  + R +G +IE F   KG + P  ++P +  +  + +   E A +I   LKS  
Sbjct: 300 MGSYGIGVSRLVGAIIEAFHDDKGIIWPESVAPFRIGLINLQTKVTEAADKIYKALKSDE 359

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
             +  D    ++  K     +  +P  II G K   E+ + ++   +   +++ + +AI
Sbjct: 360 --VLYDDTEGSVGVKFSRMDLIGLPWQIIVGKKAIDEKIVEVKNRATGEVKEMQIEEAI 416


>gi|237709524|ref|ZP_04540005.1| uridine kinase [Bacteroides sp. 9_1_42FAA]
 gi|237724881|ref|ZP_04555362.1| uridine kinase [Bacteroides sp. D4]
 gi|265754732|ref|ZP_06089784.1| uridine kinase [Bacteroides sp. 3_1_33FAA]
 gi|229436619|gb|EEO46696.1| uridine kinase [Bacteroides dorei 5_1_36/D4]
 gi|229456580|gb|EEO62301.1| uridine kinase [Bacteroides sp. 9_1_42FAA]
 gi|263234846|gb|EEZ20414.1| uridine kinase [Bacteroides sp. 3_1_33FAA]
          Length = 554

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/185 (24%), Positives = 89/185 (48%), Gaps = 4/185 (2%)

Query: 15  KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLS-DPVREGSIEIITPEDPRSLAVI 73
           KNFP+ ++  D+    +  +    V+  +N KV  L+        +E +   +P  +   
Sbjct: 13  KNFPIGSSLLDIYNGFNLDIPYGPVSAKVNNKVEGLNYRAYNNKDVEFLNMLNPSGMRTY 72

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
             S   I+ +AV+ ++P+ ++ +   +  G+Y D         D++++I+++M+EI+  +
Sbjct: 73  VRSLCFILCKAVEDLYPDGKIMLEHPVSKGYYCDLQIGHETGLDDVSRIKQRMKEIVEAN 132

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE-WFDLCRGPHVRSTG 192
            PF +      K  ELF  K    KV++LE+  + E  + Y   E   D   G  + STG
Sbjct: 133 IPFHRFECHTTKVVELFCRKGMMDKVKLLET--SGELYSYYYTLENTIDYYYGSLLPSTG 190

Query: 193 QVKKF 197
            ++KF
Sbjct: 191 YIRKF 195


>gi|312134482|ref|YP_004001820.1| prolyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
 gi|311774533|gb|ADQ04020.1| prolyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
          Length = 572

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/169 (24%), Positives = 86/169 (50%), Gaps = 8/169 (4%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG+  +   G+++ + + + +R ++ +   +E++   ++ + LW++SG W  +   MF +
Sbjct: 37  SGIYVYLPLGYRVLRKIENIVREEMDRSGAQELHMSALMPKELWEESGRWAVFGPEMFRI 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           K  ++     R + L P +      +  + + SYRELP  L +  + +R+E      G+M
Sbjct: 97  KDRNE-----REYCLGPTHEEAFTYIVRNEITSYRELPKILYQIQTKFRDERRPRF-GVM 150

Query: 382 RVRGFTQDDAHVFCTKEQMFN-ECLKIHNLIISIYKDFGFEKIMVKLST 429
           R R FT  DA+ F   E+  +    K+++  + I+K  G +  +V+  T
Sbjct: 151 RCREFTMKDAYSFDIDEKGLDISYQKMYDAYVRIFKRCGLDVKIVEADT 199


>gi|212692837|ref|ZP_03300965.1| hypothetical protein BACDOR_02336 [Bacteroides dorei DSM 17855]
 gi|212664626|gb|EEB25198.1| hypothetical protein BACDOR_02336 [Bacteroides dorei DSM 17855]
          Length = 554

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/185 (24%), Positives = 89/185 (48%), Gaps = 4/185 (2%)

Query: 15  KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLS-DPVREGSIEIITPEDPRSLAVI 73
           KNFP+ ++  D+    +  +    V+  +N KV  L+        +E +   +P  +   
Sbjct: 13  KNFPIGSSLLDIYNGFNLDIPYGPVSAKVNNKVEGLNYRAYNNKDVEFLNMLNPSGMRTY 72

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
             S   I+ +AV+ ++P+ ++ +   +  G+Y D         D++++I+++M+EI+  +
Sbjct: 73  VRSLCFILCKAVEDLYPDGKIMLEHPVSKGYYCDLQIGHETGLDDVSRIKQRMKEIVEAN 132

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE-WFDLCRGPHVRSTG 192
            PF +      K  ELF  K    KV++LE+  + E  + Y   E   D   G  + STG
Sbjct: 133 IPFHRFECHTTKVVELFCRKGMMDKVKLLET--SGELYSYYYTLENTIDYYYGSLLPSTG 190

Query: 193 QVKKF 197
            ++KF
Sbjct: 191 YIRKF 195


>gi|320104617|ref|YP_004180208.1| prolyl-tRNA synthetase [Isosphaera pallida ATCC 43644]
 gi|319751899|gb|ADV63659.1| prolyl-tRNA synthetase [Isosphaera pallida ATCC 43644]
          Length = 595

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/184 (23%), Positives = 88/184 (47%), Gaps = 11/184 (5%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I + GSG   +   GW++   +++ +R+ + D   +E+  P +    LW+++G + ++  
Sbjct: 32  IRQLGSGAYTYLPLGWRVLNKIVAIVRKGMDDAGAQEMLMPALQPVELWKETGRYQTFGD 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            +  +K   D     +T AL P +      +    +KSYR+LP+ L +  + +R+EP   
Sbjct: 92  LLMQLKVGGD-----QTMALGPTHEEVVTDLARDLIKSYRQLPMTLYQIQTKFRDEPRPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
             G++R R F   DA+ F       N+    ++     I+ + G   ++V+  + P   +
Sbjct: 147 F-GVLRTREFLMKDAYSFDANLDQLNQSYDAMYEAYQRIFDECGIPYVVVEAESGP---I 202

Query: 436 GSDA 439
           G D+
Sbjct: 203 GGDS 206


>gi|260588577|ref|ZP_05854490.1| phosphoribulokinase family protein [Blautia hansenii DSM 20583]
 gi|260541052|gb|EEX21621.1| phosphoribulokinase family protein [Blautia hansenii DSM 20583]
          Length = 576

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 5/190 (2%)

Query: 12  GSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSL 70
           G  K +P   T   +A+          V +  + K+C+L   ++ EG+IE IT +D    
Sbjct: 33  GEQKEYPYGTTYGKIAQEYQSKYEYPIVLLMKDNKLCELHKKLKKEGTIEFITTQDQIGH 92

Query: 71  AVIRHSCAHIMAEAVQSIWPE---VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQ 127
              R S + ++ +A+  +       +V +   +  G+YY  D +   + D L +++  M 
Sbjct: 93  ETYRRSVSLLLLKALHHVAGYDNITKVTMHYSVSSGYYYTIDGDIVLNEDFLNKVKAYML 152

Query: 128 EIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPH 187
           E++ R  P LK+ +  ++A ELF + K  Y  E L        V +Y   E+ D   G  
Sbjct: 153 ELVERKIPILKRSVGTDEAIELFHNHK-MYDKEKLFRFRRVSRVNIYSLEEYEDYFYGFM 211

Query: 188 VRSTGQVKKF 197
           V  TG +K F
Sbjct: 212 VNHTGYLKYF 221


>gi|224476386|ref|YP_002633992.1| prolyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus
           TM300]
 gi|222420993|emb|CAL27807.1| putative prolyl-tRNA synthetase [Staphylococcus carnosus subsp.
           carnosus TM300]
          Length = 566

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 88/183 (48%), Gaps = 11/183 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E   HR L   +    I +  SGV  +     ++   + + +R +++  D  EI  P 
Sbjct: 17  EAEALSHRLL---LKAGLIKQSTSGVYSYLPLATRVLNKITAIVREEMESIDAVEILMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW++SG WD+Y + +  +     T ++ R FAL P +     ++    +KSY++L
Sbjct: 74  LQPSELWEESGRWDAYGSELMRL-----TDRNGRQFALGPTHEEVVTSLVRDEVKSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKD 417
           P+ L +  S +R+E      GL+R R F   DA+ F   E   +E   ++++    I+K 
Sbjct: 129 PLTLFQIQSKFRDEKRPRF-GLLRGREFIMKDAYSFHADEASLDETYNQMYDAYSRIFKR 187

Query: 418 FGF 420
            G 
Sbjct: 188 AGI 190


>gi|291616370|ref|YP_003519112.1| ProS [Pantoea ananatis LMG 20103]
 gi|291151400|gb|ADD75984.1| ProS [Pantoea ananatis LMG 20103]
          Length = 572

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 84/176 (47%), Gaps = 9/176 (5%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           TQYL   ++    D   ++ ++ L    I +  SG+  W   G ++ + + + +R ++ +
Sbjct: 4   TQYLLSTQKETPSDAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREEMNN 63

Query: 290 DYE-EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
               EI+ P V    LWQ+SG W+ Y   +   + AD   +  R F L P +      + 
Sbjct: 64  AGAIEISMPVVQPADLWQESGRWEQYGPELL--RVAD---RHERPFVLGPTHEEVITDLI 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
            + L SY++LP+ L +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 119 RNELSSYKQLPLNLYQIQTKFRDEVRPRF-GVMRSREFIMKDAYSFHTSQESLQET 173


>gi|327392821|dbj|BAK10243.1| Prolyl-tRNA synthetase ProS [Pantoea ananatis AJ13355]
          Length = 572

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 84/176 (47%), Gaps = 9/176 (5%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           TQYL   ++    D   ++ ++ L    I +  SG+  W   G ++ + + + +R ++ +
Sbjct: 4   TQYLLSTQKETPSDAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREEMNN 63

Query: 290 DYE-EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
               EI+ P V    LWQ+SG W+ Y   +   + AD   +  R F L P +      + 
Sbjct: 64  AGAIEISMPVVQPADLWQESGRWEQYGPELL--RVAD---RHERPFVLGPTHEEVITDLI 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
            + L SY++LP+ L +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 119 RNELSSYKQLPLNLYQIQTKFRDEVRPRF-GVMRSREFIMKDAYSFHTSQESLQET 173


>gi|15893960|ref|NP_347309.1| Fision threonyl-tRNA synthetase (N-terminal part) and uridine
           kinase [Clostridium acetobutylicum ATCC 824]
 gi|15023548|gb|AAK78649.1|AE007582_11 Fision threonyl-tRNA synthetase (N-terminal part) and uridine
           kinase [Clostridium acetobutylicum ATCC 824]
 gi|325508087|gb|ADZ19723.1| Fision threonyl-tRNA synthetase (N-terminal part) and uridine
           kinase [Clostridium acetobutylicum EA 2018]
          Length = 553

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 93/199 (46%), Gaps = 7/199 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGS--DVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           S I++   DG  ++F V+   S  D         A+ A+  ++NG + +L+      G  
Sbjct: 2   SSIEIKLKDG--RSFKVNRGTSFHDFINQNKLEGAETAMLGSVNGNIYELTHKFSYSGIF 59

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDE 118
           +II  ++P  + V   +   ++ +AV  I P   V I   I +G + +  K+    +  +
Sbjct: 60  DIIDLKNPIGIKVYERTLQFVLVKAVSDILPNAVVTIEHSINNGIFGEIHKQDGELTEAD 119

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           + +I+ +M EI+ +D P  K  +  EKA E+FE      KV +L+ +  K  + LY    
Sbjct: 120 IDKIKNRMLEIVKKDLPIKKVTIDKEKAVEIFEKYGMKDKVRLLKYVKVKY-LKLYELDG 178

Query: 179 WFDLCRGPHVRSTGQVKKF 197
            +D   G    STG +K F
Sbjct: 179 RYDYFYGAMAYSTGALKLF 197


>gi|42520651|ref|NP_966566.1| prolyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           melanogaster]
 gi|81831258|sp|Q73GW6|SYP_WOLPM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|42410390|gb|AAS14500.1| prolyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           melanogaster]
          Length = 422

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 94/419 (22%), Positives = 167/419 (39%), Gaps = 72/419 (17%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  SG+  W   G  + + +   +R ++ K    E   P V    LW++SG +D Y  
Sbjct: 32  IKQIASGIYTWLPLGLLVLKNIEDIIRDEMNKSGAIEALMPCVQPASLWRESGRYDDYGK 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  +K  D   +D+      P +      +    +KSY++LP+ L +    +R+E    
Sbjct: 92  EMLRIK--DRHEEDM---LFGPTHEEIATDLIRDVVKSYKDLPLCLYQIQWKFRDEVR-P 145

Query: 377 LHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP---- 431
            +G+MR R F   DA+ F    E   N    ++   I I+K  GF  I V   T P    
Sbjct: 146 RYGVMRGREFLMKDAYSFDVDYEGALNSYNLMYKTYIKIFKRMGFTPIGVGADTGPIGGN 205

Query: 432 -------EKRVGSDALWDD--------AENI-----MKGVLDTIKNS-----SQDRINT- 465
                      G   L+ D        +E+I     +  V D + +      SQ+++N  
Sbjct: 206 LSHEFHILANTGESTLYYDNKFSELLESEDIESLKSIYAVADDMHDPETCPISQEQLNVS 265

Query: 466 -GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIH 524
            G+ +G   ++G K+   +K ++                           S+    V IH
Sbjct: 266 KGIEIGHIFYFGDKYSKPMKASV--------------------------TSQDGKNVNIH 299

Query: 525 RAVFG-SIERFIGIMIENF---KGNL-PLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH 579
              +G  + R +G +IE F   KG + P  ++P +  +  + +   E A +I   LKS  
Sbjct: 300 MGSYGIGVSRLVGAIIEAFHDDKGIIWPEEVAPFRIGLINLQTKVTEAADKIYKALKSDE 359

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
             +  D    ++  K     +  +P  II G K  SE  + ++   +   +++ + +AI
Sbjct: 360 --VLYDDTEGSVGVKFSRMDLIGLPWQIIVGKKAVSENIVEVKNRATGEVKEMQIEEAI 416


>gi|323464624|gb|ADX76777.1| prolyl-tRNA synthetase [Staphylococcus pseudintermedius ED99]
          Length = 567

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/176 (25%), Positives = 87/176 (49%), Gaps = 15/176 (8%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I ++ +GV  +     ++   +   +R++++  D  E+  P +    LW++SG WD+Y  
Sbjct: 32  IKQNAAGVYSYLPVATRVIHKISDIIRQEMERIDAVEVVMPVLQQSELWKESGRWDAYGM 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            +  ++      ++ R FAL P +     ++    L+SY++LP+ L +  + +R+E    
Sbjct: 92  ELMRLRD-----RNQREFALGPTHEEVVTSLVRDELRSYKQLPLTLFQIQTKFRDEKRPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDFGFEKIMVKLSTRP 431
             GL+R R F   DA+ F T E+   E  + ++N   +I+K  G       L+ RP
Sbjct: 147 F-GLLRGREFIMKDAYSFHTDEESLMETYQNMYNAYSTIFKRVG-------LNVRP 194


>gi|297584075|ref|YP_003699855.1| prolyl-tRNA synthetase [Bacillus selenitireducens MLS10]
 gi|297142532|gb|ADH99289.1| prolyl-tRNA synthetase [Bacillus selenitireducens MLS10]
          Length = 567

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 70/138 (50%), Gaps = 7/138 (5%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  SGV  +   G+K+ Q + + +R ++ +   +E+  P +    LWQ+SG WD Y A
Sbjct: 32  IRQSTSGVYSFLPLGYKVLQKVEAIVREEMDRAGAQEMFMPSIQPAELWQESGRWDDYGA 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            +   K      +  R FAL P +     A+    ++SY+ELP+ L +  + +R+E    
Sbjct: 92  ELMRFKD-----RHQREFALGPTHEEVITAIVRDDIRSYKELPMTLYQIQTKFRDERRPR 146

Query: 377 LHGLMRVRGFTQDDAHVF 394
             G++R R F   DA+ F
Sbjct: 147 F-GVLRGREFLMKDAYSF 163


>gi|319892279|ref|YP_004149154.1| Prolyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03]
 gi|317161975|gb|ADV05518.1| Prolyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03]
          Length = 567

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/176 (25%), Positives = 87/176 (49%), Gaps = 15/176 (8%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I ++ +GV  +     ++   +   +R++++  D  E+  P +    LW++SG WD+Y  
Sbjct: 32  IKQNAAGVYSYLPVATRVIHKISDIIRQEMERIDAVEVVMPVLQQSELWKESGRWDAYGM 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            +  ++      ++ R FAL P +     ++    L+SY++LP+ L +  + +R+E    
Sbjct: 92  ELMRLRD-----RNQREFALGPTHEEVVTSLVRDELRSYKQLPLTLFQIQTKFRDEKRPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDFGFEKIMVKLSTRP 431
             GL+R R F   DA+ F T E+   E  + ++N   +I+K  G       L+ RP
Sbjct: 147 F-GLLRGREFIMKDAYSFHTDEESLMETYQNMYNAYSTIFKRVG-------LNVRP 194


>gi|297617181|ref|YP_003702340.1| prolyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
 gi|297145018|gb|ADI01775.1| prolyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
          Length = 567

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 78/160 (48%), Gaps = 10/160 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+E   HR L R      + +  +G+  +   G+++ + +++ +R ++ +   +E+  P 
Sbjct: 17  EAETVSHRLLFRAG---MVRKTAAGIYTYLPLGFRVIKKIMNIVREEMDRAGGQEVGLPI 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +  + LW QSG W+ Y   MF +K      +  R F L P +      V NH + SYR+L
Sbjct: 74  IQPRELWAQSGRWEVYGDEMFRLKD-----RHQRDFCLGPTHEEVITDVVNHEVHSYRDL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE 398
           P+ L +  + YR+E      GL+R R F   D + F   E
Sbjct: 129 PLLLYQIQNKYRDEIRPRF-GLLRGREFIMKDLYSFDVDE 167


>gi|33239959|ref|NP_874901.1| prolyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus str.
           CCMP1375]
 gi|81835850|sp|Q7VD75|SYP_PROMA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|33237485|gb|AAP99553.1| Prolyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus str.
           CCMP1375]
          Length = 603

 Score = 65.1 bits (157), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 79/168 (47%), Gaps = 11/168 (6%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHLWQQSGHWDSYRAN---M 318
           SG+  +    WK+ + + S ++ ++      E   PQ+    LW++SG WD Y A    M
Sbjct: 37  SGIYAYMPLMWKVIKKITSIVQEELDSKGCLETLLPQLHPAELWKESGRWDGYTAGEGIM 96

Query: 319 FAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLH 378
           F +     + +  R   L P +      + N  L+SY++LPV L +  + +R+E      
Sbjct: 97  FHL-----SDRQGRELGLGPTHEEVITKIANEFLQSYKQLPVNLYQIQTKFRDEIRPRF- 150

Query: 379 GLMRVRGFTQDDAHVFCTKEQMFNEC-LKIHNLIISIYKDFGFEKIMV 425
           GLMR R F   DA+ F   E    E  L++++    I+K  G E + V
Sbjct: 151 GLMRSREFIMKDAYSFHADETNLKETYLEMNDAYEKIFKRCGLETVAV 198


>gi|240103108|ref|YP_002959417.1| prolyl-tRNA synthetase [Thermococcus gammatolerans EJ3]
 gi|239910662|gb|ACS33553.1| Prolyl-tRNA synthetase (proS) [Thermococcus gammatolerans EJ3]
          Length = 483

 Score = 65.1 bits (157), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 93/401 (23%), Positives = 164/401 (40%), Gaps = 67/401 (16%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSG-HWDSYRANMFAV 321
           G+  W   G KI + +  ++  ++ +  +EE+  P ++ +  +Q+   H   +   ++ V
Sbjct: 35  GMNVWLPYGLKIMRNIEKFIHSEMARTGHEEVLFPALIPETEFQKEAEHIKGFEDEVYWV 94

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
             A     D+R   L+P +     ++F+  ++S+ +LP ++ +  +VYR E +     L+
Sbjct: 95  THAGLDPLDVR-LILRPTSETAMYSMFSLWIRSHADLPFKVYQIVNVYRYE-TKHTRPLI 152

Query: 382 RVRG----FTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
           RVR     F    AHV F   E+   E L+I + +        F  +   +S RP+    
Sbjct: 153 RVREISRFFEAHTAHVDFEDAERQIKEDLEIFDRLAK------FLALPYVISRRPD---- 202

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
               WD                             GAFY    E ++ D  GR  Q GT+
Sbjct: 203 ----WDKFP--------------------------GAFYSLGAEIMMPD--GRTLQIGTM 230

Query: 497 QVDFNLPSRF-NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLS 551
               N    F  A+ +   +E      +H+  FG  ER +  +I     +    LP  ++
Sbjct: 231 H---NYKQNFAKAYNIQYETETGDHEYVHQTTFGMSERLLAAVIAVHGDDSGMVLPPTIA 287

Query: 552 PIQAIVTTITSS-----AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPII 606
           PIQ ++  I           YA+EIA  L      +  D R+     K  +  +K +P+ 
Sbjct: 288 PIQVVIVPIPKKDANVDVFAYAREIAEELGKAGFRVHVDERDIRPGRKYYDWELKGVPLR 347

Query: 607 IICGDKEASERSIGIRRFGSTTTQKVSL-LDAIPILTKESL 646
           I  G ++   R   + R    T +KV++  DAI    K++L
Sbjct: 348 IEVGPRDVEGRKAVLAR--RDTFEKVTVERDAIVEEVKKTL 386


>gi|304413226|ref|ZP_07394699.1| Prolyl-tRNA synthetase [Candidatus Regiella insecticola LSR1]
 gi|304284069|gb|EFL92462.1| Prolyl-tRNA synthetase [Candidatus Regiella insecticola LSR1]
          Length = 597

 Score = 65.1 bits (157), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 50/202 (24%), Positives = 94/202 (46%), Gaps = 10/202 (4%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           +QYL   ++    D   ++ ++ L    I +  SG+  W   G ++ + + + +R ++ +
Sbjct: 4   SQYLLATQKEIPADAESISHKLMLRAGMIQQVTSGLYTWLPTGLRVLKKVENIVREEMNN 63

Query: 290 DYE-EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
               E++ P V    LWQ+SG WD Y   +   +  D   +  R F L P +     A+ 
Sbjct: 64  AGAIEVSMPMVQPADLWQESGRWDKYGLELL--RFVD---RHERHFVLGPTHEEVITALV 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KI 407
            + +KSY++LP+ L +  + +R+E      G+MR R F   DA+ F T ++   +    +
Sbjct: 119 RNQIKSYKQLPLNLFQIQTKFRDEVRPRF-GVMRAREFLMKDAYSFHTTQESLQKTYDTM 177

Query: 408 HNLIISIYKDFGFEKIMVKLST 429
           H     I+   G +   V+  T
Sbjct: 178 HATYSKIFSRIGLDFRAVQADT 199


>gi|323339428|ref|ZP_08079710.1| proline--tRNA ligase [Lactobacillus ruminis ATCC 25644]
 gi|323093139|gb|EFZ35729.1| proline--tRNA ligase [Lactobacillus ruminis ATCC 25644]
          Length = 572

 Score = 65.1 bits (157), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 36/151 (23%), Positives = 77/151 (50%), Gaps = 7/151 (4%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
           +I +  +G+  +    +++ + + + +R ++++ D  E+  P  L   LWQQ+G +++Y 
Sbjct: 31  YIKQITAGMYAYLPLAYRVLRNIEAIIREEMENIDAAEMLVPAALPAELWQQTGRYETYG 90

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            N+F  +   +     R F L P +      +    +K+Y++LP+ L +  + YR+E   
Sbjct: 91  PNLFKFQDRHE-----RDFILGPTHEETFTTIVRDAVKTYKKLPITLYQIQTKYRDENRP 145

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
              GL+R R F   DA+ F  +E+  ++  +
Sbjct: 146 RF-GLLRGREFIMKDAYSFHAEEESLDKTFR 175


>gi|78212243|ref|YP_381022.1| prolyl-tRNA synthetase [Synechococcus sp. CC9605]
 gi|114152271|sp|Q3ALR5|SYP_SYNSC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|78196702|gb|ABB34467.1| prolyl-tRNA synthetase [Synechococcus sp. CC9605]
          Length = 593

 Score = 65.1 bits (157), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 7/165 (4%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+E   H+ L R     +I   GSG+  +    W++ Q + + +R ++ +   +E   PQ
Sbjct: 17  EAEITSHQLLLRA---GYIRRVGSGIYAYLPLMWRVLQKITAVVREEMNRAGAQETLLPQ 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W  Y A    +   +D  +  R   L P +     ++    L+SYR+L
Sbjct: 74  LHPAELWQKSGRWQGYTAGEGIMFHLED--RQGRELGLGPTHEEVITSLAGELLRSYRQL 131

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE 403
           PV L +  + +R+E      GLMR R F   DA+ F   E    E
Sbjct: 132 PVNLYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSFHASEADLRE 175


>gi|332140465|ref|YP_004426203.1| prolyl-tRNA synthetase [Alteromonas macleodii str. 'Deep ecotype']
 gi|226731424|sp|B4RV73|SYP_ALTMD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|327550487|gb|AEA97205.1| prolyl-tRNA synthetase [Alteromonas macleodii str. 'Deep ecotype']
          Length = 572

 Score = 65.1 bits (157), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 91/194 (46%), Gaps = 10/194 (5%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-K 288
           +QYL   ++    D   ++ ++ L    I +  SG+  W   G ++   + + +R ++ K
Sbjct: 4   SQYLLATQKETPADAEVISHQLMLRAGMIRKLASGLYTWLPSGLRVLNKVANIVREEMNK 63

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
               E+  P V    LW++SG W+ Y   +  VK      +  R F L P +     A+ 
Sbjct: 64  AGAIEVLMPVVQPADLWEESGRWEEYGPELLRVKD-----RHQRDFVLGPTHEEVITALV 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KI 407
            + + SY++LP+ L +  + +R+E      G+MR R FT  DA+ F  ++    E   K+
Sbjct: 119 RNEISSYKQLPLNLYQVQTKFRDEVRPRF-GIMRGREFTMKDAYSFHLEDSCLEETYQKM 177

Query: 408 HNLIISIYKDFGFE 421
           ++   +I+   G +
Sbjct: 178 YDAYCAIFSRMGLD 191


>gi|81428868|ref|YP_395868.1| prolyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
 gi|114152205|sp|Q38W72|SYP_LACSS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|78610510|emb|CAI55561.1| Prolyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
          Length = 569

 Score = 65.1 bits (157), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 41/159 (25%), Positives = 80/159 (50%), Gaps = 10/159 (6%)

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQV 299
           +E + HR + R     +I +  +GV  +    +++ + + + ++ ++ K D  ++  P +
Sbjct: 18  AEAKSHRMMLRAG---YIHQVSAGVYSYLPLAYRVLENIQAIIKDEMSKIDAVQMQMPGI 74

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           L   LW++SG + +Y  N+F  K      +  R F L P +      +  + +KSY++LP
Sbjct: 75  LPAELWEESGRYATYGPNLFKFKD-----RHSRDFILGPTHEETFADLVRNNIKSYKKLP 129

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE 398
           + L +  + YR+E     +GL+R R F   DA+ F   E
Sbjct: 130 LTLYQIQTKYRDEDR-PRYGLLRGREFIMQDAYSFSANE 167


>gi|171185819|ref|YP_001794738.1| prolyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta]
 gi|259511627|sp|B1Y963|SYP_THENV RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|170935031|gb|ACB40292.1| prolyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta]
          Length = 487

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 92/418 (22%), Positives = 171/418 (40%), Gaps = 73/418 (17%)

Query: 249 LAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD--YEEINTPQVLDQHLW- 305
           L RE +L+ +     G   W   G K+ + +   +RR + D+  +EE+  P  +    + 
Sbjct: 25  LLREAELYDVRYPVKGAYVWRPYGMKLRRNVEELIRR-VHDETGHEEVLFPVFIPYEFFG 83

Query: 306 QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEF 365
           ++S H   +   +F V    +  + L    L+P +    + +    ++ Y++LP+RL + 
Sbjct: 84  KESQHIRGFEKEVFWVSKGGEGGERL---VLRPTSETAIMPMVKLWIQDYKDLPLRLYQI 140

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQ-DDAHVFCT----KEQMFNECLKIHNLIISIYKDFGF 420
            SV+R E   + H ++R+R  +   +AH         E+   E ++I+  I      F  
Sbjct: 141 VSVFRAETKMT-HPMIRLREISMFKEAHTVHVDREDAERQVREAVEIYKRI------FDE 193

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
             +   ++ RP+        WD                             GA Y   F+
Sbjct: 194 MCLAYMINKRPD--------WDKF--------------------------AGAEYTIAFD 219

Query: 481 YILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
            +L D  GR  Q GT   +  N    F   Y+++   +    + H   +G  ER I  M+
Sbjct: 220 TVLPD--GRTLQIGTAHYLGTNFTRVFEVTYLDADGTRK---LAHTTSYGISERSIAAML 274

Query: 540 ----ENFKGNLPLWLSPIQAIVTTITSS------AVEYAQEIANLLKSHHLSIET-DFRN 588
               ++    LP  L+PIQ  V  I  S       +++ +E+   LK   L +   D R+
Sbjct: 275 ITHGDDGGTTLPPKLAPIQIAVVPIYYSDEEMPLVMKFVEEVVAALKGAGLRLHVDDRRD 334

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS---LLDAIPILTK 643
           +T  +K     +K +P+ +  G ++  +R + + R  +     V+   L+DA+  L K
Sbjct: 335 KTPGWKFYYWELKGVPLRLEVGKRDVEKRQVVVTRRDTLEKYAVALGELVDAVRELMK 392


>gi|312794183|ref|YP_004027106.1| prolyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii 177R1B]
 gi|312181323|gb|ADQ41493.1| prolyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii 177R1B]
          Length = 572

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 40/169 (23%), Positives = 86/169 (50%), Gaps = 8/169 (4%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG+  +   G+++ + + + +R ++ +   +E++   ++ + LW++SG W  +   MF +
Sbjct: 37  SGIYVYLPLGYRVLRKIENIVREEMDRSGAQEVHMSALMPKELWEESGRWAVFGPEMFRI 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           K  ++     R + L P +      +  + + SYR+LP  L +  + +R+E      G+M
Sbjct: 97  KDRNE-----REYCLGPTHEEAFTYIVRNEITSYRDLPKILYQIQTKFRDERRPRF-GVM 150

Query: 382 RVRGFTQDDAHVFCTKEQMFN-ECLKIHNLIISIYKDFGFEKIMVKLST 429
           R R FT  DA+ F   E+  +    K+++  + I+K  G +  +V+  T
Sbjct: 151 RCREFTMKDAYSFDIDEKGLDISYQKMYDAYVRIFKRCGLDVKIVEADT 199


>gi|290994605|ref|XP_002679922.1| uridine kinase family protein [Naegleria gruberi]
 gi|284093541|gb|EFC47178.1| uridine kinase family protein [Naegleria gruberi]
          Length = 584

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/215 (21%), Positives = 100/215 (46%), Gaps = 8/215 (3%)

Query: 9   FPDGSIKNFPVHATGSDVAESISRSLAKKA--VAVAINGKVCDLSDPVREGSIEI--ITP 64
           FPD SI  FP      D+A  + + +  K    A+ IN  +  L++ +    +++  +  
Sbjct: 35  FPDKSIHVFPCPVKCFDIAVLLKKHMHIKTDIYALEINNLITSLNEVISFAQVKVAPVLK 94

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           +     A++R S   ++  A    +PE+ +++   +  G+    D +   +++++++++ 
Sbjct: 95  DSVEGHAILRRSLVFLVGLATHLEFPELSLSVEHSLRSGYMICVDGKDELTNEQVSKVQH 154

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFES-KKEAYKVEILESIPAKENVTLYRQG---EWF 180
           +M+ ++++D P L +Y+S+E A + F++  K  Y   ++ +         Y  G   ++F
Sbjct: 155 RMELLVSKDLPILTRYVSYEMAMDFFQNVVKRPYTASLISANNDPAVPIDYCDGVDQQYF 214

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRP 215
           DL     V  T  +K  F L K    +     N P
Sbjct: 215 DLHHRTLVARTSFMKSTFTLEKFKQGFKLSFPNEP 249


>gi|312128280|ref|YP_003993154.1| prolyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
 gi|311778299|gb|ADQ07785.1| prolyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
          Length = 572

 Score = 64.7 bits (156), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 40/169 (23%), Positives = 86/169 (50%), Gaps = 8/169 (4%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG+  +   G+++ + + + +R ++ +   +E++   ++ + LW++SG W  +   MF +
Sbjct: 37  SGIYVYLPLGYRVLRKIENIVREEMDRSGAQEVHMSALMPKELWEESGRWAVFGPEMFRI 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           K  ++     R + L P +      +  + + SYR+LP  L +  + +R+E      G+M
Sbjct: 97  KDRNE-----REYCLGPTHEEAFTYIVRNEISSYRDLPKILYQIQTKFRDERRPRF-GVM 150

Query: 382 RVRGFTQDDAHVFCTKEQMFN-ECLKIHNLIISIYKDFGFEKIMVKLST 429
           R R FT  DA+ F   E+  +    K+++  + I+K  G +  +V+  T
Sbjct: 151 RCREFTMKDAYSFDIDEKGLDISYQKMYDAYVRIFKRCGLDVKIVEADT 199


>gi|222085595|ref|YP_002544125.1| prolyl-tRNA synthetase protein [Agrobacterium radiobacter K84]
 gi|221723043|gb|ACM26199.1| prolyl-tRNA synthetase protein [Agrobacterium radiobacter K84]
          Length = 475

 Score = 64.7 bits (156), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 54/216 (25%), Positives = 89/216 (41%), Gaps = 16/216 (7%)

Query: 223 TAWNTQQELTQYLYFL-----EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQ 277
           T WN    L++Y   +     +E+E   HR + R      I +   G+  W   G ++  
Sbjct: 30  TIWNQPMRLSRYFMPILKENPKEAEIVSHRLMLRAG---MIRQQSQGIYSWLPLGKRVLD 86

Query: 278 TLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFAL 336
            +   +R  + +    E++ P +    LWQ+SG +D+Y   M  +K   D     R    
Sbjct: 87  KVNKIIREEQNRSGAIELSMPTLQSAELWQESGRYDAYGKEMLRIKDRQD-----RPMLY 141

Query: 337 KPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-C 395
            P N      +F   +KSY++LP+ L      +R+E      G MR R F   DA+ F  
Sbjct: 142 GPTNEEMITDIFRSSVKSYKDLPLNLYHIQLKFRDEIRPRF-GTMRSREFMMKDAYSFDL 200

Query: 396 TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP 431
           T+E       K+    +  +   G   I ++  T P
Sbjct: 201 TQEGAVIAYNKMFAAYLRTFDRLGLRAIPMRADTGP 236


>gi|254518003|ref|ZP_05130059.1| phosphoribulokinase/uridine kinase [Clostridium sp. 7_2_43FAA]
 gi|226911752|gb|EEH96953.1| phosphoribulokinase/uridine kinase [Clostridium sp. 7_2_43FAA]
          Length = 551

 Score = 64.7 bits (156), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 84/179 (46%), Gaps = 5/179 (2%)

Query: 23  GSDVAESISRSLAKKAVAVAI---NGKVCDL-SDPVREGSIEIITPEDPRSLAVIRHSCA 78
           G    E I  SL   +  VA+   N K  +L  D    G IE+I  + P    +   +  
Sbjct: 18  GITYKEFIDTSLNINSTDVALCRLNRKYHELFKDIDSNGEIELIMFDSPIGYKIYTRTLQ 77

Query: 79  HIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLK 138
            I  +A   ++    + I   I +G + +  KE+  SS+++ +I+ +M+EII +D P  K
Sbjct: 78  FIFIKATLDLFDNSVITIEHSIGEGVFGELHKEEALSSEDIDKIKLRMKEIIEKDLPINK 137

Query: 139 QYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
             +  EKA E+F+      KV +L  + + ENV LY     +D   G    STG +K F
Sbjct: 138 IKVKIEKAIEIFKEYGMDDKVSLLNQV-SFENVNLYELDGRYDYFYGQMAYSTGVIKAF 195


>gi|312877991|ref|ZP_07737931.1| prolyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
 gi|311795226|gb|EFR11615.1| prolyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
          Length = 572

 Score = 64.7 bits (156), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 40/169 (23%), Positives = 86/169 (50%), Gaps = 8/169 (4%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG+  +   G+++ + + + +R ++ +   +E++   ++ + LW++SG W  +   MF +
Sbjct: 37  SGIYVYLPLGYRVLRKIENIVREEMDRSGAQEVHMSALMPKELWEESGRWAVFGPEMFRI 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           K  ++     R + L P +      +  + + SYR+LP  L +  + +R+E      G+M
Sbjct: 97  KDRNE-----REYCLGPTHEEAFTYIVRNEITSYRDLPKILYQIQTKFRDERRPRF-GVM 150

Query: 382 RVRGFTQDDAHVFCTKEQMFN-ECLKIHNLIISIYKDFGFEKIMVKLST 429
           R R FT  DA+ F   E+  +    K+++  + I+K  G +  +V+  T
Sbjct: 151 RCREFTMKDAYSFDIDEKGLDISYQKMYDAYVRIFKRCGLDVKIVEADT 199


>gi|109897601|ref|YP_660856.1| prolyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
 gi|123171506|sp|Q15WD6|SYP_PSEA6 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|109699882|gb|ABG39802.1| prolyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
          Length = 571

 Score = 64.7 bits (156), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 54/204 (26%), Positives = 96/204 (47%), Gaps = 17/204 (8%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDLFH--IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-K 288
           +QYL   ++    D   ++ ++ L    + +  SG+  W   G ++   +   +R ++ +
Sbjct: 4   SQYLLSTQKETPADAEVISHQLMLRAGLVRKLASGLYTWLPTGLRVLNKVAQIVREEMDR 63

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
               EI  P V    LWQ+SG WD Y   +  +K      +  R F L P +     A+ 
Sbjct: 64  AGSLEILMPVVQPADLWQESGRWDEYGPELLRIKD-----RHYRDFVLGPTHEEVVTALV 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KI 407
            + + SY++LP+ + +  + +R+E      G+MR R FT  DA+ F     + +ECL K 
Sbjct: 119 KNEVSSYKQLPLNVYQVQTKFRDEVRPRF-GVMRGREFTMKDAYSF----HLSDECLNKT 173

Query: 408 HNLIISIYKDFGFEKIMVKLSTRP 431
           ++ + + Y    FE+I   L  RP
Sbjct: 174 YDDMFAAYCRV-FERI--NLEFRP 194


>gi|146295842|ref|YP_001179613.1| prolyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
 gi|166980111|sp|A4XHN7|SYP_CALS8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|145409418|gb|ABP66422.1| prolyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
          Length = 572

 Score = 64.7 bits (156), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 40/169 (23%), Positives = 86/169 (50%), Gaps = 8/169 (4%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG+  +   G+++ + + + +R ++ +   +E++   ++ + LW++SG W  +   MF +
Sbjct: 37  SGIYVYLPLGYRVLRKIENIVREEMDRAGAQEVHMSALMPKELWEESGRWAVFGPEMFKI 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           K  ++     R + L P +      +  + + SYR+LP  L +  + +R+E      G+M
Sbjct: 97  KDRNE-----REYCLGPTHEEAFTYIVRNEVTSYRDLPKILYQIQTKFRDERRPRF-GVM 150

Query: 382 RVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFEKIMVKLST 429
           R R FT  DA+ F   E+  +    K+++  + I+K  G +  +V+  T
Sbjct: 151 RCREFTMKDAYSFDMNEEGLDISYKKMYDAYVRIFKRCGLDVKIVEADT 199


>gi|15897489|ref|NP_342094.1| prolyl-tRNA synthetase [Sulfolobus solfataricus P2]
 gi|284174806|ref|ZP_06388775.1| prolyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
 gi|74581610|sp|Q9UWX2|SYP_SULSO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|6015904|emb|CAB57731.1| prolyl (glutamyl) tRNA synthetase [Sulfolobus solfataricus P2]
 gi|13813734|gb|AAK40884.1| Prolyl -tRNA synthetase (proS) [Sulfolobus solfataricus P2]
 gi|261602249|gb|ACX91852.1| prolyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
          Length = 481

 Score = 64.7 bits (156), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 97/401 (24%), Positives = 166/401 (41%), Gaps = 64/401 (15%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHLWQ-QSGHWDSYRANMFAV 321
           G+  W   G+K+ Q +I  +R  +    +EE+  P ++ + L + +S H   +   +F V
Sbjct: 35  GMGVWMPYGFKLRQNIIGIIRNFLDSTGHEEVLFPLLIPEDLLRRESTHIKGFEEEVFWV 94

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
                T  D++  AL+P +      + N  LKSY++LP +  +  SV+R E   +   ++
Sbjct: 95  TKGGSTDLDVK-LALRPTSEVAITTMENLWLKSYKQLPKKYYQIVSVFRYETKAT-RPMI 152

Query: 382 RVRGFTQ-DDAHVFCTKEQMFNECLKIHNLIISIYKD-FGFEKIMVKLSTRPEKRVGSDA 439
           R+R  T   +AH   T  + +++  K     I IYK  F    I   LS RPE       
Sbjct: 153 RLREITTFKEAH---TVHETYDDAQKQVEEAIEIYKKIFDTLTIPYVLSERPE------- 202

Query: 440 LWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI-QV 498
            WD                             GA +   F+ I+ D  GR  Q GT+  +
Sbjct: 203 -WDRF--------------------------AGALHTYAFDTIMPD--GRAMQIGTVHHL 233

Query: 499 DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQ 554
             N     +           +P   H+  +G  +R +  +I    ++    LP  ++PI+
Sbjct: 234 GQNFSKALDFKIQKKDGSLDYP---HQTSYGISDRAVASVIAIHGDDHGPVLPPSVAPIK 290

Query: 555 AIVTTI-------TSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPII 606
            +V  I       T   ++Y+ EI  +   ++++  TD   E T   K     IK +PI 
Sbjct: 291 VVVIPIPAKNEEETQQVMKYSIEICEMFNKNNITCLTDQDTEKTPGEKFYIWEIKGVPIR 350

Query: 607 IICGDKEASERSIGIRR---FGSTTTQKVSLLDAIPILTKE 644
           +  G +E    ++ I+R   F S T +K   ++ I  L  E
Sbjct: 351 LEIGPRELISGTVFIKRRDNFKSYTVRKEEAINKIKELLNE 391


>gi|157964462|ref|YP_001499286.1| prolyl-tRNA synthetase [Rickettsia massiliae MTU5]
 gi|157844238|gb|ABV84739.1| Prolyl-tRNA synthetase [Rickettsia massiliae MTU5]
          Length = 437

 Score = 64.7 bits (156), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 49/179 (27%), Positives = 78/179 (43%), Gaps = 14/179 (7%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  +G+  W   G K+ + + + +R  + K    EI  P +   HLW +SG +D+Y  
Sbjct: 41  IRQQAAGIYTWLPLGLKVLKNIENIVRLNMNKAGALEILMPCIQPAHLWMESGRFDNYGK 100

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M   +   D      T    P N      +F H +KSY++LP  L      +R+E    
Sbjct: 101 EMLKFQDRHDN-----TLLFSPTNEDMITDIFRHNIKSYKDLPKNLYHIQWKFRDEIRPR 155

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQ----MFNECLKIHNLIISIYKDFGFEKIMVKLSTRP 431
             G+MR R F   DA+ F   E+     +N+  K +   I+ ++D G   I V     P
Sbjct: 156 F-GVMRGREFLMKDAYSFDINEENAVKTYNQMYKAY---INAFRDLGVFAIPVIADNGP 210


>gi|227510249|ref|ZP_03940298.1| prolyl-tRNA synthetase [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
 gi|227189901|gb|EEI69968.1| prolyl-tRNA synthetase [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
          Length = 569

 Score = 64.7 bits (156), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 42/167 (25%), Positives = 80/167 (47%), Gaps = 10/167 (5%)

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQV 299
           +E   H+ L R     +I +  +G+  +    +++   + + +R+++ K    E+  P V
Sbjct: 18  AEALSHKMLVRAG---YIKQISAGMYAYLPLAYRVLTKIETIVRQEMEKTSAHEMLMPDV 74

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           L   LW++SG +++Y   +F  K   DT      F L P +      +    +KSY++LP
Sbjct: 75  LPAELWKESGRYETYGPELFKFKNRHDT-----DFILGPTHEETFTELIRDSIKSYKQLP 129

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           + L +  + YR+E     +GL+R R F   DA+ F   E   ++  +
Sbjct: 130 LVLYQIQNKYRDEDR-PRYGLLRSREFIMKDAYSFAANEADLDDAYR 175


>gi|296185726|ref|ZP_06854135.1| phosphoribulokinase / Uridine kinase family protein [Clostridium
           carboxidivorans P7]
 gi|296049854|gb|EFG89279.1| phosphoribulokinase / Uridine kinase family protein [Clostridium
           carboxidivorans P7]
          Length = 551

 Score = 64.7 bits (156), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 84/179 (46%), Gaps = 5/179 (2%)

Query: 23  GSDVAESISRSLAKKAVAVA---INGKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSCA 78
           G+ + + I +S  ++ + +    ING+ C+L+  + E S IE +   D         +  
Sbjct: 18  GTTLYDVIKKSSCEQNIPIVLGKINGEYCELTSTIEENSEIEAVNITDKLGSKTFIRTLQ 77

Query: 79  HIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLK 138
            I+ ++V  ++PE Q+ I   +  G + +  K  P + +++ +I+ +M E I ++    K
Sbjct: 78  FILIKSVFDLFPEAQITIEHSLSKGLFGEIHKNTPLTEEDIQKIKIRMNETIQKNIQIKK 137

Query: 139 QYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
             +  +KA E+F + +   KV +L  +     V LY     +D   G    STG +  F
Sbjct: 138 VSMDRKKAIEIFSTYRMEDKVRLLNHVNTA-TVKLYELDGRYDYFYGSMAYSTGIINVF 195


>gi|222528589|ref|YP_002572471.1| prolyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
 gi|254782881|sp|B9MPD7|SYP_ANATD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|222455436|gb|ACM59698.1| prolyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
          Length = 572

 Score = 64.7 bits (156), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 40/169 (23%), Positives = 85/169 (50%), Gaps = 8/169 (4%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG+  +   G+++ + + + +R ++ +   +E++   ++ + LW++SG W  +   MF +
Sbjct: 37  SGIYVYLPLGYRVLRKIENIVREEMDRSGAQEVHMSALMPKELWEESGRWAVFGPEMFRI 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           K  ++     R + L P +      +  + + SYR+LP  L +  + +R+E      G+M
Sbjct: 97  KDRNE-----REYCLGPTHEEAFTYIVRNEISSYRDLPKILYQIQTKFRDERRPRF-GVM 150

Query: 382 RVRGFTQDDAHVFCTKEQMFN-ECLKIHNLIISIYKDFGFEKIMVKLST 429
           R R FT  DA+ F   E   +    K+++  + I+K  G +  +V+  T
Sbjct: 151 RCREFTMKDAYSFDIDENGLDISYQKMYDAYVRIFKRCGLDVKIVEADT 199


>gi|227827828|ref|YP_002829608.1| prolyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
 gi|229585098|ref|YP_002843600.1| prolyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
 gi|259511620|sp|C3N6D0|SYP_SULIA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|259511623|sp|C3MW88|SYP_SULIM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|227459624|gb|ACP38310.1| prolyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
 gi|228020148|gb|ACP55555.1| prolyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
          Length = 481

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 95/395 (24%), Positives = 167/395 (42%), Gaps = 64/395 (16%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHLW-QQSGHWDSYRANMFAV 321
           G+  W   G+K+ Q +IS +R  +    +EE+  P ++ + L  ++S H   +   +F V
Sbjct: 35  GMGVWMPYGFKLRQNIISIIRNLLDSTGHEEVLFPLLIPEDLLSRESTHIKGFEEEVFWV 94

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
                   D++  AL+P +      + N  LKSY++LP +  +  SV+R E   +   ++
Sbjct: 95  TKGGSEDLDVK-LALRPTSEVAITTMENLWLKSYKQLPKKYYQIVSVFRYETKAT-RPMI 152

Query: 382 RVRGFTQ-DDAHVFCTKEQMFNECLKIHNLIISIYKD-FGFEKIMVKLSTRPEKRVGSDA 439
           R+R  T   +AH   T  + +++  +     I IYK  F    I   LS RPE       
Sbjct: 153 RLREITTFKEAH---TVHETYDDAQRQVEEAIEIYKKIFNNLAIPYVLSERPE------- 202

Query: 440 LWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVD 499
            WD                             GA +   F+ I+ D  G+  Q GT+   
Sbjct: 203 -WDRF--------------------------AGALHTYAFDTIMPD--GKVMQIGTVHHL 233

Query: 500 FNLPSRFNAFYVNSHSEKC-HPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQ 554
               SR   F +        +P   H+  +G  +R I  +I    ++    LP  ++PI+
Sbjct: 234 GQNFSRALDFKIQKKDGSLDYP---HQTSYGISDRAIASVIAIHGDDHGPILPPSVAPIK 290

Query: 555 AIVTTI-------TSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPII 606
            +V  I       T   ++Y+ EI  +L  ++++  TD   E T   K     IK +PI 
Sbjct: 291 VVVVPIPAKNEEGTQQVMKYSVEICEMLNKNNITCVTDQDTEKTPGEKFYIWEIKGVPIR 350

Query: 607 IICGDKEASERSIGIRR---FGSTTTQKVSLLDAI 638
           +  G +E +  ++ I+R     S T +K  +++ +
Sbjct: 351 LEIGPRELASSTVFIKRRDNLKSYTVKKEEVVNKV 385


>gi|332141950|ref|YP_004427688.1| prolyl-tRNA synthetase [Alteromonas macleodii str. 'Deep ecotype']
 gi|327551972|gb|AEA98690.1| prolyl-tRNA synthetase [Alteromonas macleodii str. 'Deep ecotype']
          Length = 572

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 90/194 (46%), Gaps = 10/194 (5%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-K 288
           +QYL   ++    D   ++ ++ L    I +  SG+  W   G ++   + + +R ++ K
Sbjct: 4   SQYLLATQKETPADAEVISHQLMLRAGMIRKLASGLYTWLPSGLRVLNKVANIVREEMNK 63

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
               E+  P V    LW++SG W+ Y   +  VK      +  R F L P +     A+ 
Sbjct: 64  AGAIEVLMPVVQPADLWEESGRWEEYGPELLRVKD-----RHQRDFVLGPTHEEVITALV 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KI 407
            + + SY++LP+ L +  + +R+E      G+MR R FT  DA+ F  ++    E   K+
Sbjct: 119 RNEISSYKQLPLNLYQVQTKFRDEVRPRF-GIMRGREFTMKDAYSFHLEDSCLEETYQKM 177

Query: 408 HNLIISIYKDFGFE 421
           +    +I+   G +
Sbjct: 178 YGAYCAIFSRMGLD 191


>gi|302871195|ref|YP_003839831.1| prolyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
 gi|302574054|gb|ADL41845.1| prolyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
          Length = 572

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 40/169 (23%), Positives = 86/169 (50%), Gaps = 8/169 (4%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG+  +   G+++ + + + +R ++ +   +E++   ++ + LW++SG W  +   MF +
Sbjct: 37  SGIYVYLPLGYRVLRKIENIVREEMDRSGAQEVHMSALMPKELWEESGRWAIFGPEMFRI 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           K  ++     R + L P +      +  + + SYR+LP  L +  + +R+E      G+M
Sbjct: 97  KDRNE-----REYCLGPTHEEAFTYIVRNEISSYRDLPKILYQIQTKFRDERRPRF-GVM 150

Query: 382 RVRGFTQDDAHVFCTKEQMFN-ECLKIHNLIISIYKDFGFEKIMVKLST 429
           R R FT  DA+ F   E+  +    K+++  + I+K  G +  +V+  T
Sbjct: 151 RCREFTMKDAYSFDIDEKGLDISYQKMYDAYVRIFKRCGLDVKIVEADT 199


>gi|152981235|ref|YP_001354678.1| prolyl-tRNA synthetase [Janthinobacterium sp. Marseille]
 gi|166980130|sp|A6T2D1|SYP_JANMA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|151281312|gb|ABR89722.1| prolyl-tRNA synthetase [Janthinobacterium sp. Marseille]
          Length = 577

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 77/162 (47%), Gaps = 8/162 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
           GSG+  +   G ++ + + + +R ++ + +  E+  P V    LWQ++G WD   A +  
Sbjct: 36  GSGIYTYMPMGLRVIRKVEAIIREEMNNAHAIELLMPLVQPAELWQETGRWDKMGAELMR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           VK      +  R FA++P +      V    +KSYR+LP+      + +R+E      GL
Sbjct: 96  VKD-----RHGREFAIQPTSEEVVTDVVRTEIKSYRQLPINFYHIQTKFRDERRPRF-GL 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKI-HNLIISIYKDFGFE 421
           MR R FT  DA+ F        +  +I  +  + I+  FG +
Sbjct: 150 MRGREFTMKDAYSFDRDIDGLKKSYQIMFDAYVKIFNRFGLQ 191


>gi|254303428|ref|ZP_04970786.1| proline--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
 gi|148323620|gb|EDK88870.1| proline--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
          Length = 567

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 78/166 (46%), Gaps = 10/166 (6%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
           +E+E   H+ + R   +  +A   SG+  +   G++  + + + +R ++ +    E+  P
Sbjct: 16  KEAEIASHKLMLRAGMIKKLA---SGIYAYLPLGYRTIKKIENIVREEMDRAGALELLMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            V    LWQ+SG WD   A M  +K   +     R F L P       A+    + SY+ 
Sbjct: 73  VVQPAELWQESGRWDVMGAEMLRLKDRHE-----RDFVLSPTQEEMITAIIRSDISSYKS 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE 403
           LP+ L    + +R+E      GLMR R FT  DA+ F T ++  +E
Sbjct: 128 LPINLYHIQTKFRDERRPRF-GLMRGREFTMKDAYSFHTSQESLDE 172


>gi|15921730|ref|NP_377399.1| prolyl-tRNA synthetase [Sulfolobus tokodaii str. 7]
 gi|74581041|sp|Q971B5|SYP_SULTO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|15622517|dbj|BAB66508.1| 483aa long hypothetical prolyl-tRNA synthetase [Sulfolobus tokodaii
           str. 7]
          Length = 483

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 89/378 (23%), Positives = 166/378 (43%), Gaps = 63/378 (16%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHLWQ-QSGHWDSYRANMFAV 321
           G+  W   G+KI Q ++  +R+ + +  +EE+  P ++ + L + +S H   +   ++ V
Sbjct: 35  GMGVWMPYGFKIRQNVLQLIRKLLDETGHEEVLFPLLIPEDLLKKESEHIRGFEEEVYWV 94

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
                   D++  AL+P +      + +  +KSY++LP +  +  SV+R E   +   +M
Sbjct: 95  TKGGSQDLDVK-LALRPTSETSITFMESFWVKSYKQLPKKYYQIVSVFRYETKAT-RPMM 152

Query: 382 RVRGFTQ-DDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK--LSTRPEKRVGSD 438
           R+R  T   +AH   T  + + +  +  +  I+IYK F F+++ +   +S RPE      
Sbjct: 153 RLREITTFKEAH---TLHETYEDAARQVDEAINIYKAF-FDELGIPYMISKRPE------ 202

Query: 439 ALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
             WD                             GA Y   F+ IL D+  R  Q GT+  
Sbjct: 203 --WDKF--------------------------AGAEYTIAFDTILPDS--RVLQIGTVH- 231

Query: 499 DFNLPSRFN-AFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNLPLW---LSPI 553
             +L   F  AF      +       H+  +G  +R I ++I  N   + P+    ++PI
Sbjct: 232 --HLGQHFTKAFDFKIQRKDGSLDYPHQTSYGISDRVIAVLIAINGDDHGPVLNPVIAPI 289

Query: 554 QAIVTTI-------TSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPI 605
           + ++  I       T+  + YA+E+   LK+  +++  D   E T   K     +K +P+
Sbjct: 290 KVVIVPIPAKDEETTAKIINYAKEVGENLKNRGITVVIDDDKEKTPGEKFYIWELKGVPL 349

Query: 606 IIICGDKEASERSIGIRR 623
            I  G KE +  ++ I+R
Sbjct: 350 RIEIGPKELNNNTVYIKR 367


>gi|323474896|gb|ADX85502.1| prolyl-tRNA synthetase [Sulfolobus islandicus REY15A]
          Length = 481

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 95/395 (24%), Positives = 167/395 (42%), Gaps = 64/395 (16%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHLW-QQSGHWDSYRANMFAV 321
           G+  W   G+K+ Q +IS +R  +    +EE+  P ++ + L  ++S H   +   +F V
Sbjct: 35  GMGVWMPYGFKLRQNIISIIRNLLDSTGHEEVLFPLLIPEDLLSRESTHIKGFEEEVFWV 94

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
                   D++  AL+P +      + N  LKSY++LP +  +  SV+R E   +   ++
Sbjct: 95  TKGGSEDLDVK-LALRPTSEVAITTMENLWLKSYKQLPKKYYQIVSVFRYETKAT-RPMI 152

Query: 382 RVRGFTQ-DDAHVFCTKEQMFNECLKIHNLIISIYKD-FGFEKIMVKLSTRPEKRVGSDA 439
           R+R  T   +AH   T  + +++  +     I IYK  F    I   LS RPE       
Sbjct: 153 RLREITTFKEAH---TVHETYDDAQRQVEEAIEIYKKIFNNLAIPYVLSERPE------- 202

Query: 440 LWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVD 499
            WD                             GA +   F+ I+ D  G+  Q GT+   
Sbjct: 203 -WDRF--------------------------AGALHTYAFDTIMPD--GKVMQIGTVHHL 233

Query: 500 FNLPSRFNAFYVNSHSEKC-HPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQ 554
               SR   F +        +P   H+  +G  +R I  +I    ++    LP  ++PI+
Sbjct: 234 GQNFSRALDFKIQKKDGSLDYP---HQTSYGISDRAIASVIAIHGDDHGPILPPSVAPIK 290

Query: 555 AIVTTI-------TSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPII 606
            +V  I       T   ++Y+ EI  +L  ++++  TD   E T   K     IK +PI 
Sbjct: 291 VVVVPIPAKNEEGTQQVMKYSIEICEMLNKNNITCVTDQDTEKTPGEKFYIWEIKGVPIR 350

Query: 607 IICGDKEASERSIGIRR---FGSTTTQKVSLLDAI 638
           +  G +E +  ++ I+R     S T +K  +++ +
Sbjct: 351 LEIGPRELASSTVFIKRRDNLKSYTVKKEEVVNKV 385


>gi|259503119|ref|ZP_05746021.1| proline-tRNA ligase [Lactobacillus antri DSM 16041]
 gi|259168985|gb|EEW53480.1| proline-tRNA ligase [Lactobacillus antri DSM 16041]
          Length = 578

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 78/159 (49%), Gaps = 15/159 (9%)

Query: 255 LFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK----DDYE-----EINTPQVLDQHLW 305
           L HI  + +G I+    G   +  L   + RK+K    ++ E     E+ TP +L   LW
Sbjct: 21  LSHIMMERAGYIYQISAGVWAYLPLAYRVIRKVKGIIQEEMEKAGAYEMETPSMLPADLW 80

Query: 306 QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEF 365
           +Q+G +++Y   ++  K  +D     R + L P +      +    +KSY++LP+ + + 
Sbjct: 81  RQTGRYEAYGDTLYKFKDHND-----REYILGPTDEEAMTEILRDSVKSYKKLPLVVYQI 135

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
              +RNEP    +G++R + F+  DA+ F   E+  +E 
Sbjct: 136 TDKFRNEPR-PRYGVLRGKEFSMLDAYSFAADEEGLDEA 173


>gi|210623134|ref|ZP_03293600.1| hypothetical protein CLOHIR_01550 [Clostridium hiranonis DSM 13275]
 gi|210153811|gb|EEA84817.1| hypothetical protein CLOHIR_01550 [Clostridium hiranonis DSM 13275]
          Length = 580

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 85/172 (49%), Gaps = 11/172 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  SG+      G K+ + + + ++ +++D D+ E+    ++   LWQ+SG W    A
Sbjct: 48  IKKSASGIYNQLPLGLKVERKIENIIKEEVEDADFREMLCSALIPSELWQESGRWARRGA 107

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            MF  +  D T K+   F L P +      +    + SY++LPV+L +  S YR+E    
Sbjct: 108 EMF--RLEDRTGKE---FCLGPTHEEVFTDIVRQEVSSYKQLPVKLYQIQSKYRDEKKPR 162

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLS 428
             G +R + FT  DA+ F   E+  N   K +  +I+ +K   F++  VK S
Sbjct: 163 F-GAIRTKSFTMFDAYSFDKDEESLN---KSYEEMIAAFKRI-FDRCGVKYS 209


>gi|302873591|ref|YP_003842224.1| putative threonyl-tRNA synthetase/uridine kinase [Clostridium
           cellulovorans 743B]
 gi|307688228|ref|ZP_07630674.1| putative threonyl-tRNA synthetase/uridine kinase [Clostridium
           cellulovorans 743B]
 gi|302576448|gb|ADL50460.1| putative threonyl-tRNA synthetase/uridine kinase [Clostridium
           cellulovorans 743B]
          Length = 548

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 80/160 (50%), Gaps = 2/160 (1%)

Query: 39  VAVAINGKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIG 97
           V   +NG    L   + + S I +I   D +       +   ++ +A+  I+P  +V + 
Sbjct: 34  VLALVNGNTVALETIIEKDSEISLINYTDIKGHRAYVRTLQFVLIKAINDIFPTARVTLE 93

Query: 98  PIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAY 157
             +  G + +  K+ P + +++ +I+K+MQE+I +D    K  +  ++A E+FE      
Sbjct: 94  HSLGKGIFGEIKKDTPLNEEDILKIKKRMQELIDKDIVVNKYKVPKKRAIEIFEGYGYED 153

Query: 158 KVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
           K+++LE I  KE +TL+     +D   G  V +TG +K F
Sbjct: 154 KIKLLEYI-TKEELTLHEIDGQYDYFFGDLVSTTGMLKTF 192


>gi|110801651|ref|YP_699687.1| prolyl-tRNA synthetase [Clostridium perfringens SM101]
 gi|123341520|sp|Q0SQC0|SYP_CLOPS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|110682152|gb|ABG85522.1| prolyl-tRNA synthetase [Clostridium perfringens SM101]
          Length = 570

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 77/156 (49%), Gaps = 10/156 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E   H+ + R   +  +A   +G+  +   G K+ + + + +R ++ +   +E     
Sbjct: 17  EAEIESHKLMLRAGLMRKMA---AGIYNYMPLGLKVIENVKNIVREEMNNAGAQEFLASA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++   LWQ+SG WD+Y A MF +K   +     R F L P +      +  + +KSY++L
Sbjct: 74  LIPAELWQESGRWDAYGAEMFRLKDRHN-----RDFCLGPTHEEVFTDIVRNEIKSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           P+ L +  + YR+E      G+MR R F   D + F
Sbjct: 129 PLNLYQIQTKYRDERRPRF-GVMRSREFIMKDGYSF 163


>gi|94986834|ref|YP_594767.1| prolyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00]
 gi|114152206|sp|Q1MRD0|SYP_LAWIP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|94731083|emb|CAJ54446.1| Prolyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00]
          Length = 575

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 64/137 (46%), Gaps = 15/137 (10%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG+  W   G K     IS +R ++ +   EEI  P V    LW++SG WD Y   +  +
Sbjct: 37  SGIYTWLPLGLKTLNKAISIIRSEMNRIGAEEILMPMVQPADLWKESGRWDQYGKELLRI 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGL----KSYRELPVRLAEFGSVYRNEPSGSL 377
           K   D     R + L P     H  V  H L    +SYR+LP+ + +  + +R+E     
Sbjct: 97  KDRHD-----REYCLGPT----HEEVVTHLLRGEVRSYRQLPINVYQIQTKFRDEIRPRF 147

Query: 378 HGLMRVRGFTQDDAHVF 394
            GLMR R F   DA+ F
Sbjct: 148 -GLMRAREFLMKDAYSF 163


>gi|14590847|ref|NP_142919.1| prolyl-tRNA synthetase [Pyrococcus horikoshii OT3]
 gi|74579173|sp|O58734|SYP_PYRHO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|3257420|dbj|BAA30103.1| 480aa long hypothetical prolyl-tRNA synthetase [Pyrococcus
           horikoshii OT3]
          Length = 480

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 86/401 (21%), Positives = 159/401 (39%), Gaps = 79/401 (19%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVL-DQHLWQQSGHWDSYRANMFAV 321
           G+  W   G KI + +  ++  ++ +  ++E+  P ++ +    +++ H   +   +F V
Sbjct: 33  GMNVWLPYGLKIMRNIEKFIHEEMERTGHQEVLFPALIPETEFKKEAEHIAGFEGEVFWV 92

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
             A     D+R   L+P +     ++F   ++S+ +LP ++ +  +VYR E +     L+
Sbjct: 93  THAGHEPLDVR-LVLRPTSETAMYSMFALWIRSHADLPFKVYQIVNVYRYE-TKHTRPLI 150

Query: 382 RVRG----FTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKL------STR 430
           RVR     F    AH  F   E+   E L+I            F+ +M KL      S R
Sbjct: 151 RVREISRFFEAHTAHADFEDAERQIKEDLEI------------FDNLMRKLALAYIISKR 198

Query: 431 PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRD 490
           PE        WD                             GAFY    E ++ D  GR 
Sbjct: 199 PE--------WDKFP--------------------------GAFYSLGAEVVMPD--GRT 222

Query: 491 WQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGN 545
            Q GT+     N    +N  Y        +   +H+  FG  ER +  +I    ++    
Sbjct: 223 LQIGTMHNYKQNFSKAYNILYEKEDGTHDY---VHQTTFGMSERLLAAVIAIHGDDRGMV 279

Query: 546 LPLWLSPIQAIVTTITSSAVE-----YAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           LP  ++PIQ ++  I     E     YA+ I   L+   + +  D R++   +K  +  +
Sbjct: 280 LPPTIAPIQVVIVPIPKKGSEEEVYSYAKGIEEELRDAGIRVYLDLRDKRPGWKFYDWEL 339

Query: 601 KKIPIIIICGDKEASERSIGIRR---FGSTTTQKVSLLDAI 638
           K +P+ +  G  +    ++ + R       T ++  L+D +
Sbjct: 340 KGVPVRVEVGPIDVQNSTVVLARRDKLEKITVKREELVDKV 380


>gi|110799310|ref|YP_697117.1| prolyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
 gi|168211250|ref|ZP_02636875.1| prolyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626]
 gi|123049576|sp|Q0TMM3|SYP_CLOP1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|110673957|gb|ABG82944.1| prolyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
 gi|170710790|gb|EDT22972.1| prolyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626]
          Length = 570

 Score = 64.3 bits (155), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 77/156 (49%), Gaps = 10/156 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E   H+ + R   +  +A   +G+  +   G K+ + + + +R ++ +   +E     
Sbjct: 17  EAEIESHKLMLRAGLMRKMA---AGIYNYMPLGLKVIENVKNIVREEMNNAGAQEFLASA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++   LWQ+SG WD+Y A MF +K   +     R F L P +      +  + +KSY++L
Sbjct: 74  LIPAELWQESGRWDAYGAEMFRLKDRHN-----RDFCLGPTHEEVFTDIVRNEIKSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           P+ L +  + YR+E      G+MR R F   D + F
Sbjct: 129 PLNLYQIQTKYRDERRPRF-GVMRSREFIMKDGYSF 163


>gi|296113641|ref|YP_003627579.1| prolyl-tRNA synthetase [Moraxella catarrhalis RH4]
 gi|295921335|gb|ADG61686.1| prolyl-tRNA synthetase [Moraxella catarrhalis RH4]
 gi|326568678|gb|EGE18749.1| prolyl-tRNA synthetase [Moraxella catarrhalis BC7]
          Length = 572

 Score = 64.3 bits (155), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 77/170 (45%), Gaps = 8/170 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + +   +R ++ K D +E+  P      LW +SG W+ Y A +  
Sbjct: 36  ASGLYVWMPMGLRVLKRVERIVREEMEKIDSQELLMPVTQPGELWHESGRWEDYGAELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            K      +  R F L P +      +  + LKSY++LP+   +  + +R+E      G+
Sbjct: 96  FKD-----RHSRDFVLGPTHEEVITDIARNELKSYKQLPITFYQIQTKFRDEIRPRF-GV 149

Query: 381 MRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
           MR R FT  DA+ F   KE + N    +++    I+   G     V+  T
Sbjct: 150 MRAREFTMKDAYSFHIDKESLANTYQDMYDAYNRIFTRLGLNFRAVQADT 199


>gi|326572669|gb|EGE22658.1| prolyl-tRNA synthetase [Moraxella catarrhalis CO72]
          Length = 572

 Score = 64.3 bits (155), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 77/170 (45%), Gaps = 8/170 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + +   +R ++ K D +E+  P      LW +SG W+ Y A +  
Sbjct: 36  ASGLYVWMPMGLRVLKRVERIVREEMEKIDSQELLMPVTQPGELWHESGRWEDYGAELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            K      +  R F L P +      +  + LKSY++LP+   +  + +R+E      G+
Sbjct: 96  FKD-----RHSRDFVLGPTHEEVITDIARNELKSYKQLPITFYQIQTKFRDEIRPRF-GV 149

Query: 381 MRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
           MR R FT  DA+ F   KE + N    +++    I+   G     V+  T
Sbjct: 150 MRAREFTMKDAYSFHIDKESLANTYQDMYDAYNRIFTRLGLNFRAVQADT 199


>gi|326568855|gb|EGE18925.1| prolyl-tRNA synthetase [Moraxella catarrhalis BC8]
          Length = 572

 Score = 64.3 bits (155), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 77/170 (45%), Gaps = 8/170 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + +   +R ++ K D +E+  P      LW +SG W+ Y A +  
Sbjct: 36  ASGLYVWMPMGLRVLKRVERIVREEMEKIDSQELLMPVTQPGELWHESGRWEDYGAELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            K      +  R F L P +      +  + LKSY++LP+   +  + +R+E      G+
Sbjct: 96  FKD-----RHSRDFVLGPTHEEVITDIARNELKSYKQLPITFYQIQTKFRDEIRPRF-GV 149

Query: 381 MRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
           MR R FT  DA+ F   KE + N    +++    I+   G     V+  T
Sbjct: 150 MRAREFTMKDAYSFHIDKESLANTYQDMYDAYNRIFTRLGLNFRAVQADT 199


>gi|227524393|ref|ZP_03954442.1| prolyl-tRNA synthetase [Lactobacillus hilgardii ATCC 8290]
 gi|227088624|gb|EEI23936.1| prolyl-tRNA synthetase [Lactobacillus hilgardii ATCC 8290]
          Length = 569

 Score = 64.3 bits (155), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 42/167 (25%), Positives = 80/167 (47%), Gaps = 10/167 (5%)

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQV 299
           +E   H+ L R     +I +  +G+  +    +++   + + +R+++ K    E+  P V
Sbjct: 18  AEALSHKMLVRAG---YIKQISAGMYAYLPLAYRVLTKIETIVRQEMEKTSAHEMLMPDV 74

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           L   LW++SG +++Y   +F  K   DT      F L P +      +    +KSY++LP
Sbjct: 75  LPAELWKESGRYETYGPELFKFKNRHDT-----DFILGPTHEETFTELIRDSIKSYKQLP 129

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           + L +  + YR+E     +GL+R R F   DA+ F   E   ++  +
Sbjct: 130 LILYQIQNKYRDEDR-PRYGLLRSREFIMKDAYSFAANEADLDDAYR 175


>gi|225631202|ref|ZP_03787900.1| prolyl-tRNA synthetase [Wolbachia endosymbiont of Muscidifurax
           uniraptor]
 gi|225591110|gb|EEH12294.1| prolyl-tRNA synthetase [Wolbachia endosymbiont of Muscidifurax
           uniraptor]
          Length = 422

 Score = 64.3 bits (155), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 92/419 (21%), Positives = 167/419 (39%), Gaps = 72/419 (17%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  SG+  W   G  + + +   +R ++ K    E   P V    LW++SG +D Y  
Sbjct: 32  IKQIASGIYTWLPLGLLVLKNIEDIIRDEMNKSGAIEALMPCVQPASLWRESGRYDDYGK 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  +K  D   +D+      P +      +    +KSY++LP+ L +    +R+E    
Sbjct: 92  EMLRIK--DRHEEDM---LFGPTHEEIATDLIRDVVKSYKDLPLCLYQIQWKFRDEVR-P 145

Query: 377 LHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP---- 431
            +G+MR R F   DA+ F    E   N    ++   I I+K  GF  I V+  T P    
Sbjct: 146 RYGVMRGREFLMKDAYSFDVDYEGALNSYNLMYKTYIKIFKRMGFTPIGVRADTGPIGGN 205

Query: 432 -------EKRVGSDALWDD--------AENI-----MKGVLDTIKNS-----SQDRINT- 465
                      G   L+ D        +E+I     +  V D + +      SQ+++N  
Sbjct: 206 LSHEFHILANTGESTLYYDNKFSELLESEDIESLKSIYAVADDMHDPETCPISQEQLNVS 265

Query: 466 -GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIH 524
            G+ +G   ++G K+   +K ++                           S+    V IH
Sbjct: 266 KGIEIGHIFYFGDKYSKPMKASV--------------------------TSQDGKNVNIH 299

Query: 525 RAVFG-SIERFIGIMIENF---KGNL-PLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH 579
              +G  + R +G +IE F   KG + P  ++P +  +  +     E A +I   LKS  
Sbjct: 300 MGSYGIGVSRLVGAIIEAFHDDKGIIWPESVAPFRIGLINLQPKVTEAADKIYKALKSDE 359

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
             +  D    ++  K     +  +P  II G K   E+ + ++   +   +++ + +A+
Sbjct: 360 --VLYDDTEGSVGVKFSRMDLIGLPWQIIVGKKAIDEKIVEVKNRATGEVKEMPIEEAV 416


>gi|326559635|gb|EGE10049.1| prolyl-tRNA synthetase [Moraxella catarrhalis 7169]
 gi|326560025|gb|EGE10420.1| prolyl-tRNA synthetase [Moraxella catarrhalis 46P47B1]
 gi|326562507|gb|EGE12824.1| prolyl-tRNA synthetase [Moraxella catarrhalis 103P14B1]
 gi|326567687|gb|EGE17793.1| prolyl-tRNA synthetase [Moraxella catarrhalis BC1]
 gi|326574268|gb|EGE24216.1| prolyl-tRNA synthetase [Moraxella catarrhalis 101P30B1]
 gi|326575054|gb|EGE24983.1| prolyl-tRNA synthetase [Moraxella catarrhalis O35E]
          Length = 572

 Score = 64.3 bits (155), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 77/170 (45%), Gaps = 8/170 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + +   +R ++ K D +E+  P      LW +SG W+ Y A +  
Sbjct: 36  ASGLYVWMPMGLRVLKRVERIVREEMEKIDSQELLMPVTQPGELWHESGRWEDYGAELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            K      +  R F L P +      +  + LKSY++LP+   +  + +R+E      G+
Sbjct: 96  FKD-----RHSRDFVLGPTHEEVITDIARNELKSYKQLPITFYQIQTKFRDEIRPRF-GV 149

Query: 381 MRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
           MR R FT  DA+ F   KE + N    +++    I+   G     V+  T
Sbjct: 150 MRAREFTMKDAYSFHIDKESLANTYQDMYDAYNRIFTRLGLNFRAVQADT 199


>gi|294495462|ref|YP_003541955.1| prolyl-tRNA synthetase [Methanohalophilus mahii DSM 5219]
 gi|292666461|gb|ADE36310.1| prolyl-tRNA synthetase [Methanohalophilus mahii DSM 5219]
          Length = 478

 Score = 64.3 bits (155), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 82/402 (20%), Positives = 169/402 (42%), Gaps = 61/402 (15%)

Query: 248 KLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQH-LWQ 306
           ++A+ MD+ +  +   G+  WH  G+ I +   S MR  +  D+EE   P ++ +H   +
Sbjct: 25  QIAKIMDVRYPVK---GLYVWHPFGFTIRKKTYSIMRELLDRDHEETMFPLLIPEHEFMK 81

Query: 307 QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFG 366
           ++ H   +   ++ V     +  ++   AL+P +      ++   ++S+ +LP+RL +  
Sbjct: 82  EAQHIKGFEEEVYWVTHGGTSPLEV-NLALRPTSETAIYPMYKLWVRSHADLPLRLYQIV 140

Query: 367 SVYRNEPSGSLHGLMRVRGFTQ-DDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
           + +R E +     L+R+R  T   +AH   T    + +     +  + IYK+F + ++ +
Sbjct: 141 NTFRYE-TKHTRPLIRLREITSFKEAH---TVHATWEDAASQIDEAMRIYKEF-YRRLAI 195

Query: 426 KL--STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            +  S RPE        WD                             GA Y    + ++
Sbjct: 196 PVLSSKRPE--------WDKF--------------------------PGADYTIAVDSLM 221

Query: 484 KDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
            D  GR  Q GT   +  N    F   Y +S  E+   V  H+A +G  ER +  +I   
Sbjct: 222 PD--GRTLQVGTAHHLGDNFAKTFEITYEDSEGEQ---VYAHQACYGVSERCLAALISTH 276

Query: 543 KGN----LPLWLSPIQAIVTTIT----SSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             +    LP  ++P+Q ++  I        +   + +A  LK   + ++ D  ++    K
Sbjct: 277 GDDKGLVLPPEVAPVQVVIIPIIFKKPEEVLSACEMVAEDLKDAGIKVKIDDSDKRPGAK 336

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
             +  ++ +PI +  G ++   ++  + R  +   +++ L D
Sbjct: 337 YYKWEMQGVPIRLEIGPRDLKNQAAMMARRDTGEKEQIPLED 378


>gi|18311410|ref|NP_563344.1| prolyl-tRNA synthetase [Clostridium perfringens str. 13]
 gi|168206822|ref|ZP_02632827.1| prolyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
 gi|168214717|ref|ZP_02640342.1| prolyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
 gi|168217921|ref|ZP_02643546.1| prolyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
 gi|182626988|ref|ZP_02954718.1| prolyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
 gi|81849146|sp|Q8XHQ4|SYP_CLOPE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|18146094|dbj|BAB82134.1| proline-tRNA ligase [Clostridium perfringens str. 13]
 gi|170661763|gb|EDT14446.1| prolyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
 gi|170713833|gb|EDT26015.1| prolyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
 gi|177907658|gb|EDT70282.1| prolyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
 gi|182380028|gb|EDT77507.1| prolyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
          Length = 570

 Score = 64.3 bits (155), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 77/156 (49%), Gaps = 10/156 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E   H+ + R   +  +A   +G+  +   G K+ + + + +R ++ +   +E     
Sbjct: 17  EAEIESHKLMLRAGLMRKMA---AGIYNYMPLGLKVIENVKNIVREEMNNAGAQEFLASA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++   LWQ+SG WD+Y A MF +K   +     R F L P +      +  + +KSY++L
Sbjct: 74  LIPAELWQESGRWDAYGAEMFRLKDRHN-----RDFCLGPTHEEVFTDIVRNEIKSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           P+ L +  + YR+E      G+MR R F   D + F
Sbjct: 129 PLNLYQIQTKYRDERRPRF-GVMRSREFIMKDGYSF 163


>gi|227513178|ref|ZP_03943227.1| prolyl-tRNA synthetase [Lactobacillus buchneri ATCC 11577]
 gi|227083559|gb|EEI18871.1| prolyl-tRNA synthetase [Lactobacillus buchneri ATCC 11577]
          Length = 569

 Score = 64.3 bits (155), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 79/165 (47%), Gaps = 10/165 (6%)

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQV 299
           +E   H+ L R     +I +  +G+  +    +++   + + +R+++ K    E+  P V
Sbjct: 18  AEALSHKMLVRAG---YIKQISAGMYAYLPLAYRVLTKIETIVRQEMEKTSAHEMLMPDV 74

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           L   LW++SG +++Y   +F  K   DT      F L P +      +    +KSY++LP
Sbjct: 75  LPAELWKESGRYETYGPELFKFKNRHDT-----DFILGPTHEETFTELIRDSIKSYKQLP 129

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           + L +  + YR+E     +GL+R R F   DA+ F   E   ++ 
Sbjct: 130 LVLYQIQNKYRDEDR-PRYGLLRSREFIMKDAYSFAANEADLDDA 173


>gi|301168478|emb|CBW28068.1| proline tRNA synthetase [Bacteriovorax marinus SJ]
          Length = 573

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 72/162 (44%), Gaps = 8/162 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           GSG+  +   G++  + +   +R ++ K    EI    V    LWQ+SG WD+    M  
Sbjct: 36  GSGLYSYLPFGYRSIRKVEQIIREELDKAGCHEILMSMVTPGELWQESGRWDAMGDQMLK 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           VK      K  R   L P N      +F   +KSY+ LPV L +  + +R+E      GL
Sbjct: 96  VKD-----KGGRDLCLSPTNEEAVTDIFRKTIKSYKNLPVTLYQINTKFRDELRPRF-GL 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFE 421
           MR R FT  D + F   +   +E   +I     +I+   G E
Sbjct: 150 MRGREFTMKDGYSFHIDKDSLDEVYDRIFKAYEAIFTRAGLE 191


>gi|326566943|gb|EGE17081.1| prolyl-tRNA synthetase [Moraxella catarrhalis 12P80B1]
          Length = 572

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 77/170 (45%), Gaps = 8/170 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + +   +R ++ K D +E+  P      LW +SG W+ Y A +  
Sbjct: 36  ASGLYVWMPMGLRVLKRVERIVREEMEKIDSQELLMPVTQPGELWHESGRWEDYGAELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            K      +  R F L P +      +  + LKSY++LP+   +  + +R+E      G+
Sbjct: 96  FKD-----RHSRDFVLGPTHEEVITDIARNELKSYKQLPITFYQIQTKFRDEIRPRF-GV 149

Query: 381 MRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
           MR R FT  DA+ F   KE + N    +++    I+   G     V+  T
Sbjct: 150 MRAREFTMKDAYSFHIDKESLANTYQDMYDAYNRIFTRLGLNFRAVQADT 199


>gi|239994929|ref|ZP_04715453.1| prolyl-tRNA synthetase [Alteromonas macleodii ATCC 27126]
          Length = 440

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 91/194 (46%), Gaps = 10/194 (5%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-K 288
           +QYL   ++    D   ++ ++ L    I +  SG+  W   G ++   + + +R ++ K
Sbjct: 4   SQYLLATQKETPADAEVISHQLMLRAGMIRKLASGLYTWLPSGLRVLNKVANIVREEMNK 63

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
               E+  P V    LW++SG W+ Y   +  +K      +  R F L P +     A+ 
Sbjct: 64  AGAIEVLMPVVQPADLWEESGRWEEYGPELLRIKD-----RHQRDFVLGPTHEEVITALV 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KI 407
            + + SY++LP+ L +  + +R+E      G+MR R FT  DA+ F  ++    E   K+
Sbjct: 119 RNEISSYKQLPLNLYQIQTKFRDEVRPRF-GIMRGREFTMKDAYSFHLEDSCLEETYQKM 177

Query: 408 HNLIISIYKDFGFE 421
           ++   +I+   G +
Sbjct: 178 YDAYCNIFSRMGLD 191


>gi|149378080|ref|ZP_01895802.1| prolyl-tRNA synthetase [Marinobacter algicola DG893]
 gi|149357649|gb|EDM46149.1| prolyl-tRNA synthetase [Marinobacter algicola DG893]
          Length = 577

 Score = 63.9 bits (154), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 46/194 (23%), Positives = 86/194 (44%), Gaps = 10/194 (5%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-K 288
           ++YL   ++    D   ++ +M L    I +  SG+  W   G ++ + +   +R ++ K
Sbjct: 4   SRYLIATQKETPADAEIISHQMMLRAGMIRKLASGLYSWLPMGLRVLRKVERIVREEMDK 63

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
              +E+  P V    LWQ+SG W+ Y   +  +       +  R F   P +      + 
Sbjct: 64  SGAQEVLMPAVQPAELWQESGRWEQYGGELLRMND-----RHGRDFCFGPTHEEVITDLI 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI- 407
            + LKSY+ELP    +  + +R+E      G+MR R F   DA+ F    +  N+  ++ 
Sbjct: 119 RNELKSYKELPANFYQIQTKFRDERRPRF-GVMRAREFIMKDAYSFHVNAESLNDTYQVM 177

Query: 408 HNLIISIYKDFGFE 421
           H    +I+   G +
Sbjct: 178 HRTYCAIFDRLGLD 191


>gi|238620001|ref|YP_002914827.1| prolyl-tRNA synthetase [Sulfolobus islandicus M.16.4]
 gi|259511621|sp|C4KHU5|SYP_SULIK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|238381071|gb|ACR42159.1| prolyl-tRNA synthetase [Sulfolobus islandicus M.16.4]
          Length = 481

 Score = 63.9 bits (154), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 95/395 (24%), Positives = 167/395 (42%), Gaps = 64/395 (16%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHLW-QQSGHWDSYRANMFAV 321
           G+  W   G+K+ Q +IS +R  +    +EE+  P ++ + L  ++S H   +   +F V
Sbjct: 35  GMGVWMPYGFKLRQNIISIIRNLLDSTGHEEVLFPLLIPEDLLSRESTHIKGFEEEVFWV 94

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
                   D++  AL+P +      + N  LKSY++LP +  +  SV+R E   +   ++
Sbjct: 95  TKGGSEDLDVK-LALRPTSEVAITTMENLWLKSYKQLPKKYYQIVSVFRYETKAT-RPMI 152

Query: 382 RVRGFTQ-DDAHVFCTKEQMFNECLKIHNLIISIYKD-FGFEKIMVKLSTRPEKRVGSDA 439
           R+R  T   +AH   T  + +++  +     I IYK  F    I   LS RPE       
Sbjct: 153 RLREITTFKEAH---TVHETYDDAQRQVEEAIEIYKKIFNNLTIPYVLSERPE------- 202

Query: 440 LWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVD 499
            WD                             GA +   F+ I+ D  G+  Q GT+   
Sbjct: 203 -WDRF--------------------------AGALHTYAFDTIMPD--GKVMQIGTVHHL 233

Query: 500 FNLPSRFNAFYVNSHSEKC-HPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQ 554
               SR   F +        +P   H+  +G  +R I  +I    ++    LP  ++PI+
Sbjct: 234 GQNFSRALDFKIQKKDGSLDYP---HQTSYGISDRAIASVIAIHGDDHGPILPPSVAPIK 290

Query: 555 AIVTTI-------TSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPII 606
            +V  I       T   ++Y+ EI  +L  ++++  TD   E T   K     IK +PI 
Sbjct: 291 VVVVPIPAKNEEGTQQVMKYSIEICEMLNKNNITCVTDQDTEKTPGEKFYIWEIKGVPIR 350

Query: 607 IICGDKEASERSIGIRR---FGSTTTQKVSLLDAI 638
           +  G +E +  ++ I+R     S T +K  +++ +
Sbjct: 351 LEIGPRELASSTVFIKRRDNLKSYTVKKEEVVNKV 385


>gi|163731786|ref|ZP_02139233.1| alanyl-tRNA synthetase [Roseobacter litoralis Och 149]
 gi|161395240|gb|EDQ19562.1| alanyl-tRNA synthetase [Roseobacter litoralis Och 149]
          Length = 885

 Score = 63.9 bits (154), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 58/204 (28%), Positives = 91/204 (44%), Gaps = 16/204 (7%)

Query: 13  SIKNFPVHA-TGSDVAESISRSLAKKAVAVAINGKVCDL---SDPVREGSIEIITPE--- 65
           ++   P +A +G  V +S     AK    V    K  D+   +  V EG I +       
Sbjct: 490 ALNQTPFYAESGGQVGDSGVIKTAKGTATVTDCRKTADVFVHTAKVTEGVISVGEAAQLA 549

Query: 66  -DPRSLAVIR--HSCAHIMAEAVQSIWPEVQVAIGPI-IEDGFYYDFDKEQPFSSDELAQ 121
            DP     IR  HS  H++ EA++    +     G +  ED   +DF   Q  SS+ELA+
Sbjct: 550 VDPARRTAIRANHSATHLLHEALREALGDHVAQRGSLNAEDRLRFDFSHTQALSSEELAR 609

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESK--KEAYKVEI-LESIPAKENVTLYRQGE 178
           +E  +   I +++P   + ++ + AREL       E Y  E+ + S+  KE       G+
Sbjct: 610 VEADVNTYIRQNAPVETRIMTPDAARELGAQALFGEKYGDEVRVVSMGRKEGSAKGLNGD 669

Query: 179 WF--DLCRGPHVRSTGQVKKFFKL 200
            +  +LC G HVR TG +  F  L
Sbjct: 670 TYSLELCGGTHVRQTGDIGAFVAL 693


>gi|227830538|ref|YP_002832318.1| prolyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
 gi|229579351|ref|YP_002837749.1| prolyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
 gi|229581889|ref|YP_002840288.1| prolyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
 gi|284998034|ref|YP_003419801.1| prolyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5]
 gi|259511622|sp|C3MQL0|SYP_SULIL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|259511624|sp|C3NGV6|SYP_SULIN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|259511625|sp|C3NET8|SYP_SULIY RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|227456986|gb|ACP35673.1| prolyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
 gi|228010065|gb|ACP45827.1| prolyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
 gi|228012605|gb|ACP48366.1| prolyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
 gi|284445929|gb|ADB87431.1| prolyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5]
          Length = 481

 Score = 63.9 bits (154), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 95/395 (24%), Positives = 167/395 (42%), Gaps = 64/395 (16%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHLWQ-QSGHWDSYRANMFAV 321
           G+  W   G+K+ Q +IS +R  +    +EE+  P ++ + L + +S H   +   +F V
Sbjct: 35  GMGVWMPYGFKLRQNIISIIRNLLDSTGHEEVLFPLLIPEDLLRRESTHIKGFEEEVFWV 94

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
                   D++  AL+P +      + N  LKSY++LP +  +  SV+R E   +   ++
Sbjct: 95  TKGGSEDLDVK-LALRPTSEVAITTMENLWLKSYKQLPKKYYQIVSVFRYETKAT-RPMI 152

Query: 382 RVRGFTQ-DDAHVFCTKEQMFNECLKIHNLIISIYKD-FGFEKIMVKLSTRPEKRVGSDA 439
           R+R  T   +AH   T  + +++  +     I IYK  F    I   LS RPE       
Sbjct: 153 RLREITTFKEAH---TVHETYDDAQRQVEEAIEIYKKIFNNLAIPYVLSERPE------- 202

Query: 440 LWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVD 499
            WD                             GA +   F+ I+ D  G+  Q GT+   
Sbjct: 203 -WDRF--------------------------AGALHTYAFDTIMPD--GKVMQIGTVHHL 233

Query: 500 FNLPSRFNAFYVNSHSEKC-HPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQ 554
               SR   F +        +P   H+  +G  +R I  +I    ++    LP  ++PI+
Sbjct: 234 GQNFSRALDFKIQKKDGSLDYP---HQTSYGISDRAIASVIAIHGDDHGPILPPSVAPIK 290

Query: 555 AIVTTI-------TSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPII 606
            +V  I       T   ++Y+ EI  +L  ++++  TD   E T   K     IK +PI 
Sbjct: 291 VVVVPIPAKNEEGTQQVMKYSIEICEMLNKNNITCVTDQDTEKTPGEKFYIWEIKGVPIR 350

Query: 607 IICGDKEASERSIGIRR---FGSTTTQKVSLLDAI 638
           +  G +E +  ++ I+R     S T +K  +++ +
Sbjct: 351 LEIGPRELASSTVFIKRRDNLKSYTVKKEEVVNKV 385


>gi|304384864|ref|ZP_07367210.1| proline--tRNA ligase [Pediococcus acidilactici DSM 20284]
 gi|304329058|gb|EFL96278.1| proline--tRNA ligase [Pediococcus acidilactici DSM 20284]
          Length = 571

 Score = 63.9 bits (154), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 74/151 (49%), Gaps = 7/151 (4%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
           +I +  +G+  +    +K+ + +   +R ++   D  E+ TP VL   LW++SG +++Y 
Sbjct: 31  YIRQISAGMYAYLPMAYKVMEKIKRIIREEMTAIDAVEMLTPAVLPAELWKKSGRYETYG 90

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
             ++  K   D     R F L P +      +    +KSY++LP+ L +    YR+E   
Sbjct: 91  QELYKFKNRHD-----RDFILGPTHEETMTTLIRDEVKSYKKLPLTLYQIQMKYRDEDR- 144

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
             +GL+R R F   DA+ F   E+  +E  +
Sbjct: 145 PRYGLLRGREFLMSDAYSFHADEETLDESFR 175


>gi|116617800|ref|YP_818171.1| prolyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|122271999|sp|Q03YC4|SYP_LEUMM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|116096647|gb|ABJ61798.1| Prolyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
          Length = 572

 Score = 63.9 bits (154), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 47/186 (25%), Positives = 89/186 (47%), Gaps = 15/186 (8%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+E + H+ L +   +  IA   +G+  +     ++   + + +R ++ K D  E+  P+
Sbjct: 17  EAEVKSHQLLLKAGYIRPIA---AGMFSYLPLAKRVLNKIETIIREEMDKIDANEMLVPE 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           VL   LWQ+SG +++Y   ++  K   D     R F L P +      +    +KSY++L
Sbjct: 74  VLPAELWQRSGRYETYGPALYKFKNRQD-----RDFILGPTHEETFTQLIADEIKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL---IISIY 415
           P+ + +  + +R+E      GL+R R F   DA+ F   ++  +E    HN+     +I+
Sbjct: 129 PLTVYQIQAKFRDENRPRF-GLLRTREFIMKDAYSFSADQEGLDEAF--HNMEEAYTNIF 185

Query: 416 KDFGFE 421
              G E
Sbjct: 186 DRLGLE 191


>gi|270290317|ref|ZP_06196542.1| prolyl-tRNA synthetase [Pediococcus acidilactici 7_4]
 gi|270281098|gb|EFA26931.1| prolyl-tRNA synthetase [Pediococcus acidilactici 7_4]
          Length = 571

 Score = 63.9 bits (154), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 74/151 (49%), Gaps = 7/151 (4%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
           +I +  +G+  +    +K+ + +   +R ++   D  E+ TP VL   LW++SG +++Y 
Sbjct: 31  YIRQISAGMYAYLPMAYKVMEKIKRIIREEMTAIDAVEMLTPAVLPAELWKKSGRYETYG 90

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
             ++  K   D     R F L P +      +    +KSY++LP+ L +    YR+E   
Sbjct: 91  QELYKFKNRHD-----RDFILGPTHEETMTTLIRDEVKSYKKLPLTLYQIQMKYRDEDR- 144

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
             +GL+R R F   DA+ F   E+  +E  +
Sbjct: 145 PRYGLLRGREFLMSDAYSFHADEETLDESFR 175


>gi|260436778|ref|ZP_05790748.1| prolyl-tRNA synthetase [Synechococcus sp. WH 8109]
 gi|260414652|gb|EEX07948.1| prolyl-tRNA synthetase [Synechococcus sp. WH 8109]
          Length = 597

 Score = 63.9 bits (154), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 77/165 (46%), Gaps = 7/165 (4%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+E   H+ L R     +I   GSG+  +    W++ Q + + +R ++ +   +E   PQ
Sbjct: 21  EAEITSHQLLLRA---GYIRRVGSGIYAYLPLMWRVLQKITAVVREEMNRAGAQETLLPQ 77

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W  Y A    +   +D  +  R   + P +     ++    L+SYR+L
Sbjct: 78  LHPAELWQKSGRWQGYTAGEGIMFHLED--RQGRELGIGPTHEEVITSLAGELLRSYRQL 135

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE 403
           PV L +  + +R+E      GLMR R F   DA+ F   E    E
Sbjct: 136 PVNLYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSFHASEADLRE 179


>gi|323477637|gb|ADX82875.1| prolyl-tRNA synthetase [Sulfolobus islandicus HVE10/4]
          Length = 481

 Score = 63.9 bits (154), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 95/395 (24%), Positives = 167/395 (42%), Gaps = 64/395 (16%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHLW-QQSGHWDSYRANMFAV 321
           G+  W   G+K+ Q +IS +R  +    +EE+  P ++ + L  ++S H   +   +F V
Sbjct: 35  GMGVWMPYGFKLRQNIISIIRNLLDSTGHEEVLFPLLIPEDLLSRESTHIKGFEEEVFWV 94

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
                   D++  AL+P +      + N  LKSY++LP +  +  SV+R E   +   ++
Sbjct: 95  TKGGSEDLDVK-LALRPTSEVAITTMENLWLKSYKQLPKKYYQIVSVFRYETKAT-RPMI 152

Query: 382 RVRGFTQ-DDAHVFCTKEQMFNECLKIHNLIISIYKD-FGFEKIMVKLSTRPEKRVGSDA 439
           R+R  T   +AH   T  + +++  +     I IYK  F    I   LS RPE       
Sbjct: 153 RLREITTFKEAH---TVHETYDDAQRQVEEAIEIYKKIFNNLAIPYVLSERPE------- 202

Query: 440 LWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVD 499
            WD                             GA +   F+ I+ D  G+  Q GT+   
Sbjct: 203 -WDRF--------------------------AGALHTYAFDTIMPD--GKVMQIGTVHHL 233

Query: 500 FNLPSRFNAFYVNSHSEKC-HPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQ 554
               SR   F +        +P   H+  +G  +R I  +I    ++    LP  ++PI+
Sbjct: 234 GQNFSRALDFKIQKKDGSLDYP---HQTSYGISDRAIASVIAIHGDDHGPILPPSVAPIK 290

Query: 555 AIVTTI-------TSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPII 606
            +V  I       T   ++Y+ EI  +L  ++++  TD   E T   K     IK +PI 
Sbjct: 291 VVVVPIPAKNEEGTQQVMKYSIEICEMLNKNNITCVTDQDTEKTPGEKFYIWEIKGVPIR 350

Query: 607 IICGDKEASERSIGIRR---FGSTTTQKVSLLDAI 638
           +  G +E +  ++ I+R     S T +K  +++ +
Sbjct: 351 LEIGPRELASSTVFIKRRDNLKSYTVKKEEVVNKV 385


>gi|256847045|ref|ZP_05552491.1| prolyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
 gi|256715709|gb|EEU30684.1| prolyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
          Length = 577

 Score = 63.9 bits (154), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 39/166 (23%), Positives = 82/166 (49%), Gaps = 10/166 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E   H+ + R   ++ ++   SGV  +    +++ + + + +R ++ K D  E+ TP 
Sbjct: 17  DAEALSHKMMIRAGYIYQVS---SGVWSYLPLAYRVIRKVKAIIREEMEKADAFEMETPS 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L   LWQQ+G +++Y   +F  K  +D     R   L P +      +    +KSY++L
Sbjct: 74  MLPADLWQQTGRYEAYGDTLFKFKDRND-----REHILGPTDEEVMTEILRDSIKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           P+ + +    +R+EP     G++R + F+  D + F   +   +E 
Sbjct: 129 PLTVYQITDKFRDEPRPRF-GVLRGKEFSMLDGYSFAADQAGLDEA 173


>gi|307154337|ref|YP_003889721.1| prolyl-tRNA synthetase [Cyanothece sp. PCC 7822]
 gi|306984565|gb|ADN16446.1| prolyl-tRNA synthetase [Cyanothece sp. PCC 7822]
          Length = 600

 Score = 63.9 bits (154), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 77/163 (47%), Gaps = 13/163 (7%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E + H+ L R     +I   GSG+  +    W++ Q +   +R ++     +E   PQ
Sbjct: 17  EAEIKSHKLLLRA---GYIRRIGSGIYAYLPLMWRVLQKVSQIVREEMNAIGAQECLLPQ 73

Query: 299 VLDQHLWQQSGHWDSY---RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           +    LW++SG WD+Y      MFA+    +     R   L P +      +    ++SY
Sbjct: 74  LQPSELWKESGRWDTYTKAEGIMFALGDRQE-----RELGLGPTHEEVITFIAREMIRSY 128

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE 398
           R+LP+ L +  + +R+E      GLMR R F   DA+ F T E
Sbjct: 129 RQLPLNLYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSFHTDE 170


>gi|227432324|ref|ZP_03914317.1| prolyl-tRNA synthetase [Leuconostoc mesenteroides subsp. cremoris
           ATCC 19254]
 gi|227351930|gb|EEJ42163.1| prolyl-tRNA synthetase [Leuconostoc mesenteroides subsp. cremoris
           ATCC 19254]
          Length = 572

 Score = 63.9 bits (154), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 47/186 (25%), Positives = 89/186 (47%), Gaps = 15/186 (8%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+E + H+ L +   +  IA   +G+  +     ++   + + +R ++ K D  E+  P+
Sbjct: 17  EAEVKSHQLLLKAGYIRPIA---AGMFSYLPLAKRVLNKIETIIREEMDKIDANEMLVPE 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           VL   LWQ+SG +++Y   ++  K   D     R F L P +      +    +KSY++L
Sbjct: 74  VLPAELWQRSGRYETYGPALYKFKNRQD-----RDFILGPTHEETFTQLIADEIKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL---IISIY 415
           P+ + +  + +R+E      GL+R R F   DA+ F   ++  +E    HN+     +I+
Sbjct: 129 PLTVYQIQAKFRDENRPRF-GLLRTREFIMKDAYSFSADQEGLDEAF--HNMEEAYTNIF 185

Query: 416 KDFGFE 421
              G E
Sbjct: 186 DRLGLE 191


>gi|157828402|ref|YP_001494644.1| prolyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila Smith']
 gi|165933112|ref|YP_001649901.1| prolyl-tRNA synthetase [Rickettsia rickettsii str. Iowa]
 gi|166980152|sp|A8GRW1|SYP_RICRS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|189083508|sp|B0BXB9|SYP_RICRO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|157800883|gb|ABV76136.1| prolyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila Smith']
 gi|165908199|gb|ABY72495.1| prolyl-tRNA synthetase [Rickettsia rickettsii str. Iowa]
          Length = 426

 Score = 63.9 bits (154), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 78/179 (43%), Gaps = 14/179 (7%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  +G+  W   G K+ + + + +R  + K    E+  P +   HLW +SG +D+Y  
Sbjct: 32  IRQQAAGIYTWLPLGLKVLKNIENIVRLNMNKAGALEVLMPCIQPAHLWMESGRFDNYGK 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M   +   D      T    P N      +F H +KSY++LP  L      +R+E    
Sbjct: 92  EMLKFQDRHDN-----TLLFGPTNEDMITDIFRHNIKSYKDLPKNLYHIQWKFRDEIRPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQ----MFNECLKIHNLIISIYKDFGFEKIMVKLSTRP 431
             G+MR R F   DA+ F   E+     +N+  K +   I+ ++D G   I V     P
Sbjct: 147 F-GVMRGREFLMKDAYSFDINEENAVKTYNQMYKAY---INAFRDLGVFAIPVIADNGP 201


>gi|256823089|ref|YP_003147052.1| prolyl-tRNA synthetase [Kangiella koreensis DSM 16069]
 gi|256796628|gb|ACV27284.1| prolyl-tRNA synthetase [Kangiella koreensis DSM 16069]
          Length = 571

 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 88/194 (45%), Gaps = 10/194 (5%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-K 288
           +QYL   +  +  D   ++ ++ L    I +  SG+  W   G ++ + + + +R ++ K
Sbjct: 4   SQYLLSTQREDPSDAELISHKLMLRAGMIRKIASGMYTWLPTGLRVLRKVEAIVREEMNK 63

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
               E+  P V    LW++SG WD +   +   K      +  R F L P +     AV 
Sbjct: 64  AGAIEMLMPSVQPSELWEESGRWDQFGPELLRFKD-----RHGRDFCLGPTHEEIITAVI 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI- 407
              + SY++LP    +  + +R+E      G+MR R F   DA+ F   E+  +E  ++ 
Sbjct: 119 RDEINSYKQLPASFYQIQTKFRDEVRPRF-GVMRAREFLMKDAYSFHVDEESLSETYQVM 177

Query: 408 HNLIISIYKDFGFE 421
           H    +I++  G +
Sbjct: 178 HQAYCNIFERIGLD 191


>gi|169836558|ref|ZP_02869746.1| prolyl-tRNA synthetase [candidate division TM7 single-cell isolate
           TM7a]
          Length = 282

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 75/148 (50%), Gaps = 8/148 (5%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK 322
           GV  +   G+K+ + + + +R ++ +   +EI  P +    LW++SG W +Y + +  +K
Sbjct: 38  GVYSYLPLGYKVLKKIENIVREEMDRAGSQEILMPVLQPASLWEESGRWFAYGSELMRMK 97

Query: 323 CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMR 382
             ++     R FAL P +      +  + + SY+ELP  L +  + +R+E      GLMR
Sbjct: 98  DRNE-----REFALGPTHEEVVTDIVRNTITSYKELPFNLYQIQTKFRDEMRPRF-GLMR 151

Query: 383 VRGFTQDDAHVF-CTKEQMFNECLKIHN 409
            R F   DA+ F  TKE +  E L + N
Sbjct: 152 GREFLMKDAYSFHLTKESLDEEFLNMKN 179


>gi|238650930|ref|YP_002916786.1| prolyl-tRNA synthetase [Rickettsia peacockii str. Rustic]
 gi|259511617|sp|C4K2D7|SYP_RICPU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|238625028|gb|ACR47734.1| prolyl-tRNA synthetase [Rickettsia peacockii str. Rustic]
          Length = 426

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 78/179 (43%), Gaps = 14/179 (7%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  +G+  W   G K+ + + + +R  + K    E+  P +   HLW +SG +D+Y  
Sbjct: 32  IRQQAAGIYTWLPLGLKVLKNIENIVRLNMNKAGALEVLMPCIQPAHLWMESGRFDNYGK 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M   +   D      T    P N      +F H +KSY++LP  L      +R+E    
Sbjct: 92  EMLKFQDRHDN-----TLLFGPTNEDMITDIFRHNIKSYKDLPKNLYHIQWKFRDEIRPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQ----MFNECLKIHNLIISIYKDFGFEKIMVKLSTRP 431
             G+MR R F   DA+ F   E+     +N+  K +   I+ ++D G   I V     P
Sbjct: 147 F-GVMRGREFLMKDAYSFDINEENAVKTYNQMYKAY---INAFRDLGVFAIPVIADNGP 201


>gi|297621143|ref|YP_003709280.1| hypothetical protein wcw_0913 [Waddlia chondrophila WSU 86-1044]
 gi|297376444|gb|ADI38274.1| hypothetical protein wcw_0913 [Waddlia chondrophila WSU 86-1044]
          Length = 509

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/142 (25%), Positives = 71/142 (50%), Gaps = 16/142 (11%)

Query: 485 DAIGRDWQCGTIQV----DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           D++GR+W    I++     F +    ++F            ++  +VF S+E  I +++E
Sbjct: 348 DSLGREWSGPRIELRDASGFQIDQSMDSF------------VLVGSVFRSLESLIALLLE 395

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           + KG LP WL+P Q  +  +    V +A EIA  L  +   +  D    +++ K+   + 
Sbjct: 396 SSKGELPFWLAPEQVRILPVKQEDVAWAVEIAEELIENGYRVHCDADPGSLSEKVSVANQ 455

Query: 601 KKIPIIIICGDKEASERSIGIR 622
            K+P I++ G +E  E+++ +R
Sbjct: 456 YKVPYIVVVGKREREEQAVSVR 477



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 50/212 (23%), Positives = 94/212 (44%), Gaps = 18/212 (8%)

Query: 78  AHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFL 137
           A ++  ++ +++P+ ++      + GFY       PF    L   E++++  I  +    
Sbjct: 13  AALLGRSLCTLFPQAKILHFDQTKKGFYCLCKFPHPFDDQALRMTEEELKRTIQENLKIE 72

Query: 138 KQYLSHEKARELFESKK-EAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKK 196
              +  E A  LFE +  E    EI +   +   + L R  E++ +C  PH+  T QV  
Sbjct: 73  TVEMMRENAAVLFEHRGLEPMADEIRKG--SSTIIELVRIEEFYGVCPKPHLSGTRQVGS 130

Query: 197 FFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLF 256
             KL      +W+ +     L +I G A  T ++L Q  +F   +    H +L +E DLF
Sbjct: 131 -IKL------FWKREGE---LIKIEGIARETSKDLKQ--FFKNFAAFTSHEELGKEADLF 178

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK 288
            + ++     FW  KG  I + L+ + +  ++
Sbjct: 179 FVEKN---CCFWAPKGELIREILVQWWKSSLR 207


>gi|270307741|ref|YP_003329799.1| prolyl-tRNA synthetase [Dehalococcoides sp. VS]
 gi|270153633|gb|ACZ61471.1| prolyl-tRNA synthetase [Dehalococcoides sp. VS]
          Length = 569

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/210 (25%), Positives = 99/210 (47%), Gaps = 20/210 (9%)

Query: 218 SRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQ 277
           SR++G    TQ+E+        ++E   H+ L R      IA+  +GV  +    W+  Q
Sbjct: 4   SRLFG---KTQREIPS------DAETISHQLLLRSG---MIAQLTAGVYSFMPLAWRSIQ 51

Query: 278 TLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFAL 336
            + + +R+++ K   +E+  P +    +WQQSG    +   +F +K   D     R   L
Sbjct: 52  KIENIIRQEMNKSGCQELAMPVLQPVEIWQQSGREAPFGQTLFHLKDRKD-----RNLVL 106

Query: 337 KPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT 396
            P +      + +  ++SYR+LP RL +  + +R+EP     GL+RVR F   D + F  
Sbjct: 107 GPTHEEVITDLASRYIQSYRDLPQRLYQIQTKFRDEPR-PRGGLIRVREFIMKDMYSFDA 165

Query: 397 KEQMFNECLK-IHNLIISIYKDFGFEKIMV 425
             +  +E  + +     S+Y+  G E +++
Sbjct: 166 SPEGLDESYQTMKQAYESVYRRCGLESMVI 195


>gi|157803870|ref|YP_001492419.1| prolyl-tRNA synthetase [Rickettsia canadensis str. McKiel]
 gi|166980151|sp|A8EZ51|SYP_RICCK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|157785133|gb|ABV73634.1| prolyl-tRNA synthetase [Rickettsia canadensis str. McKiel]
          Length = 438

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 78/179 (43%), Gaps = 14/179 (7%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  +G+  W   G KI + + + +R  + K    E+  P +   HLW +SG +++Y  
Sbjct: 32  IRQQAAGIYTWLPLGLKILKNIENIVRSNMNKAGALEVLMPCIQPAHLWMESGRFENYGK 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M   +   D      T    P N      +F H +KSY++LP  L      +R+E    
Sbjct: 92  EMLKFQDRHDN-----TLLFGPTNEDMITDIFRHNIKSYKDLPKNLYHIQWKFRDEIRPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQ----MFNECLKIHNLIISIYKDFGFEKIMVKLSTRP 431
             G+MR R F   DA+ F   E+     +N+  K +   I+ ++D G   I V     P
Sbjct: 147 F-GVMRGREFLMKDAYSFDINEENAVKTYNQMFKTY---INTFRDLGVFAIPVIADNGP 201


>gi|218438508|ref|YP_002376837.1| prolyl-tRNA synthetase [Cyanothece sp. PCC 7424]
 gi|226699136|sp|B7K9K1|SYP_CYAP7 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|218171236|gb|ACK69969.1| prolyl-tRNA synthetase [Cyanothece sp. PCC 7424]
          Length = 600

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/161 (29%), Positives = 77/161 (47%), Gaps = 13/161 (8%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+E   H+ L R     +I   GSG+  +    W++ Q +   +R+++     +E   PQ
Sbjct: 17  EAEIPSHKLLLRA---GYIRRIGSGIYAYLPLMWRVLQKVSQIVRQEMNATGAQECLLPQ 73

Query: 299 VLDQHLWQQSGHWDSY---RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           +    LW++SG WD+Y      MFA++   +     R   L P +      +    ++SY
Sbjct: 74  LQPSELWKESGRWDTYTKAEGIMFALEDRQE-----RELGLGPTHEEVITFIAREMIRSY 128

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT 396
           R+LPV L +  + +R+E      GLMR R F   DA+ F T
Sbjct: 129 RQLPVNLYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSFDT 168


>gi|167763729|ref|ZP_02435856.1| hypothetical protein BACSTE_02107 [Bacteroides stercoris ATCC
           43183]
 gi|167697845|gb|EDS14424.1| hypothetical protein BACSTE_02107 [Bacteroides stercoris ATCC
           43183]
          Length = 557

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/184 (23%), Positives = 86/184 (46%), Gaps = 2/184 (1%)

Query: 15  KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVI 73
           K FP+ ++  D+    + +   + V+  +N +   L+  V     +E +   D   +   
Sbjct: 16  KEFPIGSSLLDIYYGFNLNFPYQVVSAKVNNRSEGLNFRVYNNKDVEFLDVRDSSGMRTY 75

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
             S   I+ +AV  ++PE ++ +   +  G++ +    +P   ++++ I+K+MQEIIA D
Sbjct: 76  VRSLCFILYKAVSELFPEGKLFVEHPVSKGYFCNLRIGRPIELEDVSAIKKRMQEIIAED 135

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQ 193
            PF +      +A  +F  +    KV++LE+         Y  G+  D   G  + STG 
Sbjct: 136 IPFRRTECHTTEAVRVFSERGMNDKVKLLET-SGSIYTYYYTLGDTVDYYYGNLLPSTGF 194

Query: 194 VKKF 197
           +K F
Sbjct: 195 IKLF 198


>gi|269797927|ref|YP_003311827.1| prolyl-tRNA synthetase [Veillonella parvula DSM 2008]
 gi|269094556|gb|ACZ24547.1| prolyl-tRNA synthetase [Veillonella parvula DSM 2008]
          Length = 572

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 66/136 (48%), Gaps = 7/136 (5%)

Query: 272 GWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           GWK  + + + +R ++ +   +EI  P +    +W++SG W++Y A M  +    D    
Sbjct: 46  GWKSIKKIEAIVREEMDRASAQEIMMPILQPAEIWKESGRWNAYGAEMMRINDRHDN--- 102

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
              F L P +      +  + + SYR+LPV L +  S +R+E     +GLMR R F   D
Sbjct: 103 --EFCLGPTHEEMITTLVKNEINSYRQLPVNLYQIQSKFRDERR-PRYGLMRSREFIMKD 159

Query: 391 AHVFCTKEQMFNECLK 406
           A+ F   E   +E  K
Sbjct: 160 AYSFDIDEAGLDESYK 175


>gi|182419083|ref|ZP_02950337.1| fision threonyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237669277|ref|ZP_04529259.1| putative threonyl-tRNA synthetase/uridine kinase [Clostridium
           butyricum E4 str. BoNT E BL5262]
 gi|182377038|gb|EDT74608.1| fision threonyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237655164|gb|EEP52722.1| putative threonyl-tRNA synthetase/uridine kinase [Clostridium
           butyricum E4 str. BoNT E BL5262]
          Length = 551

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 88/185 (47%), Gaps = 8/185 (4%)

Query: 26  VAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPEDPRSLAVIRHSCAHIMAEA 84
           +AE+    + K      +NG+  +L++ + E G I +I  +    + +   +   I  +A
Sbjct: 25  IAEN-DEKIVKDIAICKLNGRNYELNEIIEEEGDISLIGFDSELGMKIYTRTLQFIFIKA 83

Query: 85  VQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHE 144
              ++ + ++ +   I    Y +  KE P + +EL  I+ +MQEII +D P  +  +S E
Sbjct: 84  TLDLFKDAKITLEHSISKAIYGEIYKENPLTENELKNIKSRMQEIIDKDIPIKRIKVSKE 143

Query: 145 KARELFESKKEAYKVEILESIPAKENVTLYRQG--EWFDLCRGPHVRSTGQVKKFFKLMK 202
           KA E+F +     KV++L++   KE       G  ++F  C G    STG V K F L K
Sbjct: 144 KAIEIFSNYNMEDKVKLLQTCKMKEFQLCELDGRYDYFYECMG---YSTG-VIKLFDLQK 199

Query: 203 VAGAY 207
               +
Sbjct: 200 YESGF 204


>gi|116492650|ref|YP_804385.1| prolyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745]
 gi|122265886|sp|Q03FS9|SYP_PEDPA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|116102800|gb|ABJ67943.1| Prolyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745]
          Length = 571

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 74/151 (49%), Gaps = 7/151 (4%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
           +I +  +G+  +    +K+   +   +R +++  D  E+ TP VL   LW+QSG +++Y 
Sbjct: 31  YIRQISAGMYAYLPLAYKVISKIEKIVREEMEAIDAVEMLTPAVLPAELWKQSGRYETYG 90

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
             ++  K   D     R F L P +      +    +KSY++LP+ L +    YR+E   
Sbjct: 91  QELYKFKNRHD-----RDFILGPTHEETMTTLIRDEVKSYKKLPLSLYQIQMKYRDEDRP 145

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
             +GL+R R F   DA+ F   E+  ++  +
Sbjct: 146 R-YGLLRGREFLMKDAYSFHADEETLDQSFR 175


>gi|302335688|ref|YP_003800895.1| prolyl-tRNA synthetase [Olsenella uli DSM 7084]
 gi|301319528|gb|ADK68015.1| prolyl-tRNA synthetase [Olsenella uli DSM 7084]
          Length = 571

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 80/166 (48%), Gaps = 10/166 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   HR L R      I +  +G+  +    W+  + + + +R +++    +E+  P 
Sbjct: 21  DAELASHRLLLRAG---MIRKGAAGLYSYLPLAWRSIRKIEAIIRDEMETIGAQEMQVPI 77

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           + D  LW QSG W+ Y   +  +   DD  +   ++AL P +      + ++ LKSY++L
Sbjct: 78  LTDADLWHQSGRWEVYGPELMRI---DD--RHGHSYALGPTHEESFTDLVHNELKSYKQL 132

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           PV L +    +R+E      GLMR R F   DA+ F   ++   +C
Sbjct: 133 PVTLYQVQDKFRDERRPRF-GLMRGREFIMKDAYSFSATQESLRQC 177


>gi|67458992|ref|YP_246616.1| prolyl-tRNA synthetase [Rickettsia felis URRWXCal2]
 gi|75536572|sp|Q4ULX2|SYP_RICFE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|67004525|gb|AAY61451.1| Prolyl-tRNA synthetase [Rickettsia felis URRWXCal2]
          Length = 427

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/176 (26%), Positives = 76/176 (43%), Gaps = 8/176 (4%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  +G+  W   G K+ + + + +R  + K    E+  P +   HLW +SG +D+Y  
Sbjct: 32  IRQQAAGIYTWLPLGLKVLKNIENIVRSNMNKAGALEVLMPCIQPAHLWMESGRFDNYGK 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M   +   D      T    P N      +F H +KSY++LP  L      +R+E    
Sbjct: 92  EMLKFQDRHDN-----TLLFGPTNEDMITDIFRHNIKSYKDLPKNLYHIQWKFRDEIRPR 146

Query: 377 LHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP 431
             G+MR R F   DA+ F   +E       +++   I+ ++D G   I V     P
Sbjct: 147 F-GVMRGREFLMKDAYSFDINEENAVKTYNQMYQAYINTFRDLGVFAIPVIADNGP 201


>gi|223044242|ref|ZP_03614279.1| prolyl-tRNA synthetase [Staphylococcus capitis SK14]
 gi|222442392|gb|EEE48500.1| prolyl-tRNA synthetase [Staphylococcus capitis SK14]
          Length = 567

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 85/183 (46%), Gaps = 11/183 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E   HR L +      I +  SG+  +     ++   + + +R +++  D  EI  P 
Sbjct: 17  EAEALSHRLLLKAG---LIKQSTSGIYSYLPLATRVLNNISNIVREEMESIDAVEILMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW++SG W +Y   +  +K      ++ R FAL P +     ++    LKSY+ L
Sbjct: 74  LQQAELWEESGRWGAYGPELMRLKD-----RNGREFALGPTHEEVVTSLVRDELKSYKRL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKD 417
           P+ L +  S YR+E      GL+R R F   DA+ F   E+  +   + ++N    I+K 
Sbjct: 129 PLTLFQIQSKYRDEKRPRF-GLLRGREFIMKDAYSFHADEESLDATYQDMYNAYSKIFKR 187

Query: 418 FGF 420
            G 
Sbjct: 188 VGI 190


>gi|317471546|ref|ZP_07930894.1| TGS domain-containing protein [Anaerostipes sp. 3_2_56FAA]
 gi|316900972|gb|EFV22938.1| TGS domain-containing protein [Anaerostipes sp. 3_2_56FAA]
          Length = 98

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 56/93 (60%), Gaps = 1/93 (1%)

Query: 5  IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
          +K+T  DGS+K +    +  D+A+ IS  LA+ A A  +NG+V DL   + +   + I+T
Sbjct: 1  MKITLKDGSVKEYSQSMSVIDIAKDISEGLARAACAGEVNGEVVDLRTILEDDCELNILT 60

Query: 64 PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAI 96
           +        RH+ +HI+A+AV+ ++PE ++AI
Sbjct: 61 FDSEGGRHAFRHTASHILAQAVKRLYPETKLAI 93


>gi|328955488|ref|YP_004372821.1| prolyl-tRNA synthetase [Coriobacterium glomerans PW2]
 gi|328455812|gb|AEB07006.1| prolyl-tRNA synthetase [Coriobacterium glomerans PW2]
          Length = 576

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 75/166 (45%), Gaps = 10/166 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E++   HR L R   +  +A   SG+  +    W+  + +   +R ++     +E   P 
Sbjct: 21  EADLVSHRLLLRAGMIRKMA---SGIYSYLPLAWRSLKKIEEIVRDEMDAIGAQECLLPI 77

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           + D  LW+ SG WD+Y   +  +       +  R FAL P +      +  + L SYR+L
Sbjct: 78  LTDAELWRLSGRWDAYGPELMRI-----VDRHQRQFALGPTHEETVTDLVKNELASYRQL 132

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           PV L +  + +R+E      GLMR R F   DA+ F   +    EC
Sbjct: 133 PVSLYQIQTKFRDEMRPRF-GLMRGREFIMKDAYSFSATQASLQEC 177


>gi|257075630|ref|ZP_05569991.1| prolyl-tRNA synthetase [Ferroplasma acidarmanus fer1]
          Length = 470

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 88/376 (23%), Positives = 151/376 (40%), Gaps = 68/376 (18%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLD-QHLWQQSGHWDSYRANMFAV 321
           G+  W   G KI  ++ S +R    D   EE++ P ++  + L  +  H   +   ++ V
Sbjct: 37  GMNVWLPYGLKIIHSIDSLLREYSDDGGIEEVSFPVLISREQLEVEFEHVKGFENEIYWV 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
                T  D+   AL+P +      +F   ++S+ +LP R+ +  +VYR E   +    +
Sbjct: 97  TKGGTTPLDI-DLALRPTSEAAMYTMFPLWIRSHSDLPFRIYQIVNVYRYETKHT-RSFI 154

Query: 382 RVRGFTQDDAHV----FCTKEQMFNECLKIHNLI---ISIYKDFGFEKIMVKLSTRPEKR 434
           RVR     +AH     F   E+  +E LKI   +   + IY           +  RP+  
Sbjct: 155 RVREIHFYEAHTAHVDFEDAEKQMDEYLKIMERLSDDLCIY---------FSMDIRPD-- 203

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
                 WD     M  V                     AF  P   Y       R  Q G
Sbjct: 204 ------WDKFPGAMYSV---------------------AFDTPMPGY-------RSLQIG 229

Query: 495 TI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF----IGIMIENFKGNLPLW 549
           TI +   N    +   Y++ + +  +   + +  FG  ER     IGI  ++    LP  
Sbjct: 230 TIHEYGENFAKNYGIKYLDENGDMKY---VSQTTFGLSERLMAAVIGIHGDDKGLVLPYK 286

Query: 550 LSPIQAIVTTITSSAVEYAQEIANLLKSHHLSI----ETDFRNETINYKIREHSIKKIPI 605
           L+P+Q I+  I S   +   E +N +KS  + I    + D  + T  YK  E  ++ +P+
Sbjct: 287 LAPVQVIIVPIPSDNYDEIIEYSNGIKSKLMEIGIRCQIDNSDYTPGYKFNEWEMRGVPV 346

Query: 606 IIICGDKEASERSIGI 621
            I  G +E +++++ I
Sbjct: 347 RIEIGKREVNDKTLTI 362


>gi|90408309|ref|ZP_01216474.1| prolyl-tRNA synthetase [Psychromonas sp. CNPT3]
 gi|90310610|gb|EAS38730.1| prolyl-tRNA synthetase [Psychromonas sp. CNPT3]
          Length = 573

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 17/204 (8%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-K 288
           TQYL   ++    D   ++ ++ L    I +  SG+  W   G ++ + + + +R+++ +
Sbjct: 4   TQYLLSTQKEAPSDAVIVSHQLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQEMER 63

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
               EI  P V    LW ++G WD Y   +  +K   D     R F L P +      + 
Sbjct: 64  AGAVEILMPVVQPADLWVETGRWDKYGGELLRLKDRHD-----RDFVLGPTHEEVVTELV 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KI 407
              + SY++LP+ L +  + +R+E      G+MR R FT  DA+ F     + +ECL K 
Sbjct: 119 RKEINSYKQLPLNLFQIQTKFRDETRPRF-GVMRSREFTMKDAYSF----HLEDECLEKT 173

Query: 408 HNLIISIYKDFGFEKIMVKLSTRP 431
           +  + S Y    FE++   L  RP
Sbjct: 174 YQTMFSAYCRI-FERL--GLEYRP 194


>gi|15892451|ref|NP_360165.1| prolyl-tRNA synthetase [Rickettsia conorii str. Malish 7]
 gi|229586653|ref|YP_002845154.1| prolyl-tRNA synthetase [Rickettsia africae ESF-5]
 gi|81854111|sp|Q92I92|SYP_RICCN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|259511616|sp|C3PNA1|SYP_RICAE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|15619605|gb|AAL03066.1| prolyl-tRNA synthetase [Rickettsia conorii str. Malish 7]
 gi|228021703|gb|ACP53411.1| Prolyl-tRNA synthetase [Rickettsia africae ESF-5]
          Length = 426

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 78/179 (43%), Gaps = 14/179 (7%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  +G+  W   G K+ + + + +R  + K    E+  P +   HLW +SG +D+Y  
Sbjct: 32  IRQQAAGIYTWLPLGLKVLKNIENIVRLNMNKAGALEVLMPCIQPAHLWMESGRFDNYGK 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M   +   D      T    P N      +F H +KSY++LP  L      +R+E    
Sbjct: 92  EMLKFQDRHDN-----TLLFGPTNEDMITDIFRHNIKSYKDLPKNLYHIQWKFRDEIRPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQ----MFNECLKIHNLIISIYKDFGFEKIMVKLSTRP 431
             G+MR R F   DA+ F   E+     +N+  K +   I+ ++D G   I V     P
Sbjct: 147 F-GVMRGREFLMKDAYSFDINEENAVKTYNQMYKAY---INAFRDLGVFVIPVIADNGP 201


>gi|284048708|ref|YP_003399047.1| prolyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
 gi|283952929|gb|ADB47732.1| prolyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
          Length = 571

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 66/139 (47%), Gaps = 7/139 (5%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYR 315
           +I +   G+  +    W+  + +   +R + +    +EI  P V    +WQ+SG W +Y 
Sbjct: 31  YIRKVAGGLYSYLPLAWRSLRKIEEIIREEMVPTGAQEIMMPIVQPSEIWQESGRWPAYG 90

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
           A MF +K      +  R F L P +      +    L+SYR+LPV L +  S +R+E   
Sbjct: 91  AEMFKLK-----DRHGRDFCLGPTHEELVTTLVRDDLRSYRQLPVTLYQIQSKFRDEKRP 145

Query: 376 SLHGLMRVRGFTQDDAHVF 394
              GLMR R F   DA+ F
Sbjct: 146 RF-GLMRSREFIMKDAYSF 163


>gi|115968758|ref|XP_001192510.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus
           purpuratus]
          Length = 114

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 59/109 (54%), Gaps = 3/109 (2%)

Query: 1   MPSDIKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS- 58
           +P+ IK+T PDG  ++      T  ++A+ IS+ LA  AV   +NG + DL  P  E S 
Sbjct: 2   VPAPIKITLPDGKEVEGQSWRTTPYEIAQGISQGLADNAVISKVNGVLWDLDRPFEEDSK 61

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD 107
           +E+   +      V  HS AH++ EA++  +    +  GP IE GFYYD
Sbjct: 62  MELHKFDSEEGQQVFWHSSAHMLGEAMERKYGGC-LCYGPPIESGFYYD 109


>gi|238019359|ref|ZP_04599785.1| hypothetical protein VEIDISOL_01223 [Veillonella dispar ATCC 17748]
 gi|237864058|gb|EEP65348.1| hypothetical protein VEIDISOL_01223 [Veillonella dispar ATCC 17748]
          Length = 572

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 66/136 (48%), Gaps = 7/136 (5%)

Query: 272 GWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           GW+  + + + +R ++ +   +EI  P +    +W++SG W++Y A M  +    D    
Sbjct: 46  GWRSIKKIEAIVREEMDRASAQEIMMPILQPAEIWKESGRWNAYGAEMMRINDRHDN--- 102

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
              F L P +      +  + + SYR+LPV L +  S +R+E     +GLMR R F   D
Sbjct: 103 --EFCLGPTHEEMITTLVKNEINSYRQLPVNLYQIQSKFRDERR-PRYGLMRSREFIMKD 159

Query: 391 AHVFCTKEQMFNECLK 406
           A+ F   E   +E  K
Sbjct: 160 AYSFDVDEAGLDESYK 175


>gi|315230490|ref|YP_004070926.1| prolyl-tRNA synthetase [Thermococcus barophilus MP]
 gi|315183518|gb|ADT83703.1| prolyl-tRNA synthetase [Thermococcus barophilus MP]
          Length = 480

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 86/395 (21%), Positives = 162/395 (41%), Gaps = 67/395 (16%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSG-HWDSYRANMFAV 321
           G+  W   G +I + +  ++  ++ +  ++E+  P ++ +  +Q+   H   +   +F V
Sbjct: 34  GMNIWLPYGLRIMRNIEKFIHEEMERTGHQEVLFPALIPETEFQKEAEHIAGFEGEVFWV 93

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
             A     D+R   L+P +     ++F   ++S+ +LP ++ +  +VYR E +     L+
Sbjct: 94  THAGHDPLDVR-LILRPTSETAMYSMFALWIRSHADLPFKIYQIVNVYRYE-TKHTRPLI 151

Query: 382 RVRG----FTQDDAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
           RVR     F    AH  F   E+   E L+I +   ++ K      I   +S RPE    
Sbjct: 152 RVREISRFFEAHTAHDSFEDAERQIKEDLEIFD---NLAKKLALPYI---VSKRPE---- 201

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
               WD                             GA+Y    E ++ D  GR  Q GT+
Sbjct: 202 ----WDKFP--------------------------GAYYSLGAEVVMPD--GRTLQIGTM 229

Query: 497 QVDFNLPSRF-NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLS 551
               N    F  A+ +    E      +H+  +G  ER +  +I     +    LP  ++
Sbjct: 230 H---NYKQNFAKAYNIMYEKEDGTHEYVHQTTYGMSERLLAAVIAVHGDDRGMVLPPTIA 286

Query: 552 PIQAIVTTITS-----SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPII 606
           PIQ ++  I           YA+EIA  LK+  + +  D R+     K  +  +K +P+ 
Sbjct: 287 PIQVVIVPIPKKDSPYDVFAYAREIAEELKTAGIRVHVDERDIRPGRKFYDWELKGVPLR 346

Query: 607 IICGDKEA-SERSIGIRR--FGSTTTQKVSLLDAI 638
           I  G ++   ++++  RR      T ++  L++ +
Sbjct: 347 IEVGPRDVEGQKAVLARRDTLEKFTVERAELIEKV 381


>gi|254785039|ref|YP_003072467.1| proline--tRNA ligase [Teredinibacter turnerae T7901]
 gi|259511626|sp|C5BPN9|SYP_TERTT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|237684457|gb|ACR11721.1| proline--tRNA ligase [Teredinibacter turnerae T7901]
          Length = 574

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/194 (23%), Positives = 88/194 (45%), Gaps = 10/194 (5%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDLFH--IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-K 288
           +QYL   ++    D   ++ ++ L    I +  SG+  W   G ++ + + + +R+++ K
Sbjct: 4   SQYLIATQKETPADAEVISHKLMLRAGLIRKMASGLYNWLPLGLRVLRKVENIVRQEMDK 63

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
              +E+  P V    +WQ+SG W  Y   +  +    D     R F L P +      + 
Sbjct: 64  SGAQEVLMPVVQPAEIWQESGRWQQYGPELLRINDRHD-----RAFCLGPTHEEVITDLI 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI- 407
            + +KSY++LP+   +  + +R+E      G+MR R F   DA+ F   ++   E   + 
Sbjct: 119 RNEVKSYKQLPLNFYQIQTKFRDEVRPRF-GVMRAREFLMKDAYSFHISQESLQETYDVM 177

Query: 408 HNLIISIYKDFGFE 421
           H    +I+   G +
Sbjct: 178 HRTYCNIFDRIGLQ 191


>gi|212223716|ref|YP_002306952.1| prolyl-tRNA synthetase [Thermococcus onnurineus NA1]
 gi|212008673|gb|ACJ16055.1| prolyl-tRNA synthetase [Thermococcus onnurineus NA1]
          Length = 482

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 85/387 (21%), Positives = 157/387 (40%), Gaps = 64/387 (16%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSG-HWDSYRANMFAV 321
           G+  W   G KI + +  ++  ++ +  ++E+  P ++ +  +Q+   H   +   +F V
Sbjct: 34  GMNIWLPYGLKIMRNIERFIHAEMERTGHDEVLFPALIPETEFQKEAEHIAGFEGEVFWV 93

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
             A     D++   L+P +     ++F   ++S+ +LP ++ +  + YR E +     L+
Sbjct: 94  THAGHDPLDIK-LILRPTSETAMYSMFALWIRSHADLPFKVYQIVNTYRYE-TKHTRPLI 151

Query: 382 RVRG----FTQDDAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
           RVR     F    AH  F   E+   E L+I + +        F  I   +S RP+    
Sbjct: 152 RVREISRFFEAHTAHDSFEDAERQIKEDLEIFDNLAK------FLAIPYIVSKRPD---- 201

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
               WD                             GA+Y    E ++ D  GR  Q GT+
Sbjct: 202 ----WDKFP--------------------------GAYYSLGAEVMMPD--GRTLQIGTM 229

Query: 497 QVDFNLPSRF-NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLS 551
               N    F  A+ +   +E      +H+  FG  ER +  +I    ++    LP  ++
Sbjct: 230 H---NYRQNFAKAYEILYETENGDHEYVHQTTFGMSERLLAAVIAIHGDDRGMVLPPTIA 286

Query: 552 PIQAIVTTIT-----SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPII 606
           PIQ ++  I      +    YA+EIA  L++  L +  D R+     K  +  +K +P+ 
Sbjct: 287 PIQVVIVPIPKKDAGADVFTYAREIAEELRTAGLRVHVDERDIRPGRKFYDWELKGVPLR 346

Query: 607 IICGDKEASERSIGIRRFGSTTTQKVS 633
           I  G ++   R   + R  + T + V 
Sbjct: 347 IEVGPRDVEGRKAVLARRDTLTKETVE 373


>gi|212703017|ref|ZP_03311145.1| hypothetical protein DESPIG_01055 [Desulfovibrio piger ATCC 29098]
 gi|212673605|gb|EEB34088.1| hypothetical protein DESPIG_01055 [Desulfovibrio piger ATCC 29098]
          Length = 576

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 85/183 (46%), Gaps = 11/183 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+E   H+ L R   +  +    SGV  +   G K  + +   +R ++    + E+  P 
Sbjct: 17  EAEVVSHKLLLRAGMVRKLT---SGVYIYLPLGLKALENVQRVVREEMDAAGFSELLMPM 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+   LW+++G W+ Y   +   K  +D     R + L P +      +    ++SYR+L
Sbjct: 74  VIPGDLWKETGRWEYYGKELLRFKDRND-----RDYCLGPTHEEVITDLVRGEVRSYRQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI-HNLIISIYKD 417
           PVRL +  + +R+E      GLMR R F   DA+ F + +   +E  K+ ++    I+K 
Sbjct: 129 PVRLYQIQTKFRDEIRPRF-GLMRGREFVMKDAYSFDSSDAGADESYKLMYDAYCRIFKR 187

Query: 418 FGF 420
            G 
Sbjct: 188 LGL 190


>gi|157363113|ref|YP_001469880.1| prolyl-tRNA synthetase [Thermotoga lettingae TMO]
 gi|166980167|sp|A8F3T2|SYP_THELT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|157313717|gb|ABV32816.1| prolyl-tRNA synthetase [Thermotoga lettingae TMO]
          Length = 575

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 67/143 (46%), Gaps = 15/143 (10%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH- 350
           +E++ P +    LW+ +G WD Y   M  +K   +     R F L P     H  VF H 
Sbjct: 67  QEVSMPVIQPAELWKTTGRWDDYGPEMMKLKDRHE-----RDFTLGPT----HEEVFTHM 117

Query: 351 ---GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK- 406
               L+SY++LP+ L + G  YR+E      GL+R R F   D + F   +Q  NE  + 
Sbjct: 118 VKDELRSYKQLPLFLYQIGPKYRDEIRPRF-GLLRAREFIMKDGYSFHDSDQSLNETYEA 176

Query: 407 IHNLIISIYKDFGFEKIMVKLST 429
             N    I +  G + I+++ ++
Sbjct: 177 CKNAYRKITEKIGLKYIIIEAAS 199


>gi|294791808|ref|ZP_06756956.1| proline--tRNA ligase [Veillonella sp. 6_1_27]
 gi|294793669|ref|ZP_06758806.1| proline--tRNA ligase [Veillonella sp. 3_1_44]
 gi|294455239|gb|EFG23611.1| proline--tRNA ligase [Veillonella sp. 3_1_44]
 gi|294457038|gb|EFG25400.1| proline--tRNA ligase [Veillonella sp. 6_1_27]
          Length = 572

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 66/136 (48%), Gaps = 7/136 (5%)

Query: 272 GWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           GW+  + + + +R ++ +   +EI  P +    +W++SG W++Y A M  +    D    
Sbjct: 46  GWRSIKKIEAIVREEMDRASAQEIMMPILQPAEIWKESGRWNAYGAEMMRINDRHDN--- 102

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
              F L P +      +  + + SYR+LPV L +  S +R+E     +GLMR R F   D
Sbjct: 103 --EFCLGPTHEEMITTLVKNEINSYRQLPVNLYQIQSKFRDERR-PRYGLMRSREFIMKD 159

Query: 391 AHVFCTKEQMFNECLK 406
           A+ F   E   +E  K
Sbjct: 160 AYSFDVDEAGLDESYK 175


>gi|282850156|ref|ZP_06259535.1| proline--tRNA ligase [Veillonella parvula ATCC 17745]
 gi|282579649|gb|EFB85053.1| proline--tRNA ligase [Veillonella parvula ATCC 17745]
          Length = 572

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 66/136 (48%), Gaps = 7/136 (5%)

Query: 272 GWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           GW+  + + + +R ++ +   +EI  P +    +W++SG W++Y A M  +    D    
Sbjct: 46  GWRSIKKIEAIVREEMDRASAQEIMMPILQPAEIWKESGRWNAYGAEMMRINDRHDN--- 102

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
              F L P +      +  + + SYR+LPV L +  S +R+E     +GLMR R F   D
Sbjct: 103 --EFCLGPTHEEMITTLVKNEINSYRQLPVNLYQIQSKFRDERR-PRYGLMRSREFIMKD 159

Query: 391 AHVFCTKEQMFNECLK 406
           A+ F   E   +E  K
Sbjct: 160 AYSFDVDEAGLDESYK 175


>gi|294784787|ref|ZP_06750075.1| proline--tRNA ligase [Fusobacterium sp. 3_1_27]
 gi|294486501|gb|EFG33863.1| proline--tRNA ligase [Fusobacterium sp. 3_1_27]
          Length = 567

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 84/185 (45%), Gaps = 11/185 (5%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
           +E+E   H+ + R   +  +A   SG+  +   G++  + + + +R ++ +    E+  P
Sbjct: 16  KEAEIASHKLMLRAGMIKKLA---SGIYAYLPLGYRTIKKIENIVREEMDRAGALELLMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            V    LWQ+SG WD     M  +K   +     R F L P       A+    + SY+ 
Sbjct: 73  VVQPAELWQESGRWDVMGPEMLRLKDRHE-----RDFVLSPTQEEMITAIVRSDISSYKS 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT-KEQMFNECLKIHNLIISIYK 416
           LP+ L    + +R+E      GLMR R FT  DA+ F T +E +  E L + N    I+ 
Sbjct: 128 LPINLYHIQTKFRDERRPRF-GLMRGREFTMKDAYSFHTSQESLDEEFLNMRNAYSRIFT 186

Query: 417 DFGFE 421
             G +
Sbjct: 187 RCGLK 191


>gi|304317458|ref|YP_003852603.1| ATPase AAA [Thermoanaerobacterium thermosaccharolyticum DSM 571]
 gi|302778960|gb|ADL69519.1| AAA ATPase [Thermoanaerobacterium thermosaccharolyticum DSM 571]
          Length = 547

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/198 (24%), Positives = 94/198 (47%), Gaps = 5/198 (2%)

Query: 11  DGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRS 69
           +G+ + FP + T  ++++    +     VA  ++  + DLS  V R+  I+ +       
Sbjct: 6   EGTTRFFPYNVTLLEISQHFKDNHKSTIVAAKVDNLMVDLSTKVDRDCEIQFVDMSTEEG 65

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           + V R S   ++ +AV+ I P  +V I   +  G Y +       ++  +  I+ +M+EI
Sbjct: 66  MMVYRRSLTFVLIKAVKDILPGSKVTIEHSLGKGLYCEIHGST-VNNKIVQTIKNRMKEI 124

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEI-LESIPAKENVTLYRQGEWFDLCRGPHV 188
           I  + P +K+Y+  ++A +LF   KE  K ++ L     ++ + +Y   +  D    P V
Sbjct: 125 IDANYPIVKKYMDKKEALDLF--MKEGLKEKVCLFKYSDRDEIPVYYCDDVVDFFYSPCV 182

Query: 189 RSTGQVKKFFKLMKVAGA 206
            STG +K F  L+   G 
Sbjct: 183 PSTGYLKLFDLLLYFPGV 200


>gi|70726652|ref|YP_253566.1| prolyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
 gi|114152257|sp|Q4L5W5|SYP_STAHJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|68447376|dbj|BAE04960.1| proline-tRNA ligase [Staphylococcus haemolyticus JCSC1435]
          Length = 566

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 78/164 (47%), Gaps = 8/164 (4%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  SG+  +     ++   +   +R +++  D  EI  P +    LW++SG W +Y  
Sbjct: 32  IKQSTSGIYSYLPLASRVLNNISKIIREEMESIDAVEILMPALQQAELWEESGRWGAYGP 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            +  +K      ++ R FAL P +     ++    LKSY++LP+ L +  S +R+E    
Sbjct: 92  ELMRLKD-----RNGREFALGPTHEEVVTSIVRDELKSYKQLPLTLFQIQSKFRDEKRPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDFG 419
             GL+R R F   DA+ F   E   +E  + ++N    I+K  G
Sbjct: 147 F-GLLRGREFIMKDAYSFHADEASLDETYQDMYNAYDRIFKRVG 189


>gi|257060371|ref|YP_003138259.1| prolyl-tRNA synthetase [Cyanothece sp. PCC 8802]
 gi|256590537|gb|ACV01424.1| prolyl-tRNA synthetase [Cyanothece sp. PCC 8802]
          Length = 598

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 76/169 (44%), Gaps = 13/169 (7%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E   H+ L R     +I   GSG+  +    W++ Q +   +R ++     +E   PQ
Sbjct: 17  EAEIPSHKLLLRA---GYIRRIGSGIYAYLPLMWRVLQKVSQIVREEMNAAGAQECLLPQ 73

Query: 299 VLDQHLWQQSGHWDSY---RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           +    LW++SG W++Y      MF++    DT        L P +      +    ++SY
Sbjct: 74  LQPAELWRESGRWETYTKAEGIMFSLIDRRDT-----ELGLGPTHEEVITTIAKEMIRSY 128

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           R+LPV L +  S +R+E      GLMR R F   DA+ F   E    E 
Sbjct: 129 RQLPVNLYQIQSKFRDEIRPRF-GLMRGREFIMKDAYSFHASEDSLKET 176


>gi|329724323|gb|EGG60835.1| proline--tRNA ligase [Staphylococcus epidermidis VCU144]
          Length = 567

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 91/201 (45%), Gaps = 26/201 (12%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E   HR L +      I +  SG+  +     ++   +   +R +++  D  EI  P 
Sbjct: 17  EAEALSHRLLLKAG---LIKQSTSGIYSYLPLATRVLNNISKIIREEMESIDAVEILMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW++SG W +Y   +  +K      ++ R FAL P +     ++    LKSY++L
Sbjct: 74  LQQAELWEESGRWSAYGPELMRLKD-----RNGREFALGPTHEEVVTSLVRDELKSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+ L +  S YR+E      GL+R R F   DA+ F + E   +          + Y+D 
Sbjct: 129 PLTLFQIQSKYRDEKRPRF-GLLRGREFLMKDAYSFHSDEASLD----------ATYQD- 176

Query: 419 GFEKIMVKLSTRPEKRVGSDA 439
                M +  +R  KRVG +A
Sbjct: 177 -----MYQAYSRIFKRVGINA 192


>gi|237742688|ref|ZP_04573169.1| prolyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
 gi|229430336|gb|EEO40548.1| prolyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
          Length = 567

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 84/185 (45%), Gaps = 11/185 (5%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
           +E+E   H+ + R   +  +A   SG+  +   G++  + + + +R ++ +    E+  P
Sbjct: 16  KEAEIASHKLMLRAGMIKKLA---SGIYAYLPLGYRTIKKIENIVREEMDRAGALELLMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            V    LWQ+SG WD     M  +K   +     R F L P       A+    + SY+ 
Sbjct: 73  VVQPAELWQESGRWDVMGPEMLRLKDRHE-----RDFVLSPTQEEMITAIVRSDISSYKS 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT-KEQMFNECLKIHNLIISIYK 416
           LP+ L    + +R+E      GLMR R FT  DA+ F T +E +  E L + N    I+ 
Sbjct: 128 LPINLYHIQTKFRDERRPRF-GLMRGREFTMKDAYSFHTSQESLDEEFLNMRNAYSRIFT 186

Query: 417 DFGFE 421
             G +
Sbjct: 187 RCGLK 191


>gi|126697615|ref|YP_001086512.1| prolyl-tRNA synthetase [Clostridium difficile 630]
 gi|255099207|ref|ZP_05328184.1| prolyl-tRNA synthetase [Clostridium difficile QCD-63q42]
 gi|255304990|ref|ZP_05349162.1| prolyl-tRNA synthetase [Clostridium difficile ATCC 43255]
 gi|123174666|sp|Q18CD2|SYP1_CLOD6 RecName: Full=Prolyl-tRNA synthetase 1; AltName: Full=Proline--tRNA
           ligase 1; Short=ProRS 1
 gi|115249052|emb|CAJ66863.1| Prolyl-tRNA synthetase [Clostridium difficile]
          Length = 571

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 78/161 (48%), Gaps = 8/161 (4%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SGV      G ++F+ +   +R ++ K D +EI    +L   LW++SG W +    MF +
Sbjct: 37  SGVYNQLPMGLRVFKKIEQIIREELNKKDCQEILCAALLPSELWKESGRWTAMGEEMFRL 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           K  D T    R + L P +      +    + SY++LP+ L +    YR+E      G+M
Sbjct: 97  K--DRT---EREYCLGPTHEEAFTDIIRQEITSYKQLPLNLYQIQVKYRDERRPRF-GVM 150

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDFGFE 421
           R + FT  DA+ F   ++  ++  + + +  +SI+   G E
Sbjct: 151 RTKTFTMKDAYSFDVDDKGLDKSYQDMFDAYVSIFDRCGLE 191


>gi|242242546|ref|ZP_04796991.1| prolyl-tRNA synthetase [Staphylococcus epidermidis W23144]
 gi|242233973|gb|EES36285.1| prolyl-tRNA synthetase [Staphylococcus epidermidis W23144]
          Length = 567

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 91/201 (45%), Gaps = 26/201 (12%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E   HR L +      I +  SG+  +     ++   +   +R +++  D  EI  P 
Sbjct: 17  EAEALSHRLLLKAG---LIKQSTSGIYSYLPLATRVLNNISKIIREEMESIDAVEILMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW++SG W +Y   +  +K      ++ R FAL P +     ++    LKSY++L
Sbjct: 74  LQQAELWEESGRWSAYGPELMRLKD-----RNGREFALGPTHEEVVTSLVRDELKSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+ L +  S YR+E      GL+R R F   DA+ F + E   +          + Y+D 
Sbjct: 129 PLTLFQIQSKYRDEKRPRF-GLLRGREFLMKDAYSFHSDEASLD----------ATYQD- 176

Query: 419 GFEKIMVKLSTRPEKRVGSDA 439
                M +  +R  KRVG +A
Sbjct: 177 -----MYQAYSRIFKRVGINA 192


>gi|254973700|ref|ZP_05270172.1| prolyl-tRNA synthetase [Clostridium difficile QCD-66c26]
 gi|255091090|ref|ZP_05320568.1| prolyl-tRNA synthetase [Clostridium difficile CIP 107932]
 gi|255312745|ref|ZP_05354328.1| prolyl-tRNA synthetase [Clostridium difficile QCD-76w55]
 gi|255515506|ref|ZP_05383182.1| prolyl-tRNA synthetase [Clostridium difficile QCD-97b34]
 gi|255648598|ref|ZP_05395500.1| prolyl-tRNA synthetase [Clostridium difficile QCD-37x79]
 gi|260681818|ref|YP_003213103.1| prolyl-tRNA synthetase [Clostridium difficile CD196]
 gi|260685415|ref|YP_003216548.1| prolyl-tRNA synthetase [Clostridium difficile R20291]
 gi|306518722|ref|ZP_07405069.1| prolyl-tRNA synthetase [Clostridium difficile QCD-32g58]
 gi|260207981|emb|CBA60132.1| prolyl-tRNA synthetase [Clostridium difficile CD196]
 gi|260211431|emb|CBE01529.1| prolyl-tRNA synthetase [Clostridium difficile R20291]
          Length = 571

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 78/161 (48%), Gaps = 8/161 (4%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SGV      G ++F+ +   +R ++ K D +EI    +L   LW++SG W +    MF +
Sbjct: 37  SGVYNQLPMGLRVFKKIEQIIREELNKKDCQEILCAALLPSELWKESGRWTAMGEEMFRL 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           K  D T    R + L P +      +    + SY++LP+ L +    YR+E      G+M
Sbjct: 97  K--DRT---EREYCLGPTHEEAFTDIIRQEITSYKQLPLNLYQIQVKYRDERRPRF-GVM 150

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDFGFE 421
           R + FT  DA+ F   ++  ++  + + +  +SI+   G E
Sbjct: 151 RTKTFTMKDAYSFDVDDKGLDKSYQDMFDAYVSIFDRCGLE 191


>gi|314933442|ref|ZP_07840807.1| proline--tRNA ligase [Staphylococcus caprae C87]
 gi|313653592|gb|EFS17349.1| proline--tRNA ligase [Staphylococcus caprae C87]
          Length = 567

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 84/183 (45%), Gaps = 11/183 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E   HR L +      I +  SG+  +     ++   +   +R +++  D  EI  P 
Sbjct: 17  EAEALSHRLLLKAG---LIKQSTSGIYSYLPLATRVLNNISKIVREEMESIDAVEILMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW++SG W +Y   +  +K      ++ R FAL P +     ++    LKSY+ L
Sbjct: 74  LQQAELWEESGRWGAYGPELMRLKD-----RNGREFALGPTHEEVVTSLVRDELKSYKRL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKD 417
           P+ L +  S YR+E      GL+R R F   DA+ F   E+  +   + ++N    I+K 
Sbjct: 129 PLTLFQIQSKYRDEKRPRF-GLLRGREFIMKDAYSFHADEESLDATYQDMYNAYSRIFKR 187

Query: 418 FGF 420
            G 
Sbjct: 188 VGI 190


>gi|312111641|ref|YP_003989957.1| prolyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
 gi|311216742|gb|ADP75346.1| prolyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
          Length = 567

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 86/183 (46%), Gaps = 11/183 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E + H+ L R      I +  SGV  +   G ++ Q + + +R ++ +    E+  P 
Sbjct: 17  DAEVKSHQLLLRAG---FIRQSASGVYTFLPLGQRVLQKVEAIIREEMNRAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQQSG W SY   +  +K   +     R FAL P +      +    +KSY+ L
Sbjct: 74  LQPAELWQQSGRWYSYGPELMRLKDRHE-----RNFALGPTHEEMITTLVRDEVKSYKRL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKD 417
           P+ L +    +R+E      GL+R R F   DA+ F T ++  +E   K++    +I++ 
Sbjct: 129 PLTLYQIQVKFRDEKRPRF-GLLRGREFIMKDAYSFHTSQESLDETYNKMYEAYSNIFRR 187

Query: 418 FGF 420
            G 
Sbjct: 188 CGL 190


>gi|27467857|ref|NP_764494.1| prolyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
 gi|57866745|ref|YP_188412.1| prolyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|251810694|ref|ZP_04825167.1| prolyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
 gi|282876305|ref|ZP_06285172.1| proline--tRNA ligase [Staphylococcus epidermidis SK135]
 gi|293366773|ref|ZP_06613449.1| proline-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|81175026|sp|Q8CST7|SYP_STAES RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|81175027|sp|Q5HPS8|SYP_STAEQ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|27315402|gb|AAO04536.1|AE016747_33 proline-tRNA ligase [Staphylococcus epidermidis ATCC 12228]
 gi|57637403|gb|AAW54191.1| prolyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|251805854|gb|EES58511.1| prolyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
 gi|281295330|gb|EFA87857.1| proline--tRNA ligase [Staphylococcus epidermidis SK135]
 gi|291319074|gb|EFE59444.1| proline-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|329736329|gb|EGG72601.1| proline--tRNA ligase [Staphylococcus epidermidis VCU028]
 gi|329736632|gb|EGG72898.1| proline--tRNA ligase [Staphylococcus epidermidis VCU045]
          Length = 567

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 91/201 (45%), Gaps = 26/201 (12%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E   HR L +      I +  SG+  +     ++   +   +R +++  D  EI  P 
Sbjct: 17  EAEALSHRLLLKAG---LIKQSTSGIYSYLPLATRVLNNISKIIREEMESIDAVEILMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW++SG W +Y   +  +K      ++ R FAL P +     ++    LKSY++L
Sbjct: 74  LQQAELWEESGRWSAYGPELMRLKD-----RNGREFALGPTHEEVVTSLVRDELKSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+ L +  S YR+E      GL+R R F   DA+ F + E   +          + Y+D 
Sbjct: 129 PLTLFQIQSKYRDEKRPRF-GLLRGREFLMKDAYSFHSDEASLD----------ATYQD- 176

Query: 419 GFEKIMVKLSTRPEKRVGSDA 439
                M +  +R  KRVG +A
Sbjct: 177 -----MYQAYSRIFKRVGINA 192


>gi|218248302|ref|YP_002373673.1| prolyl-tRNA synthetase [Cyanothece sp. PCC 8801]
 gi|226699137|sp|B7K1H5|SYP_CYAP8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|218168780|gb|ACK67517.1| prolyl-tRNA synthetase [Cyanothece sp. PCC 8801]
          Length = 598

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 76/169 (44%), Gaps = 13/169 (7%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E   H+ L R     +I   GSG+  +    W++ Q +   +R ++     +E   PQ
Sbjct: 17  EAEIPSHKLLLRA---GYIRRIGSGIYAYLPLMWRVLQKVSQIVREEMNAAGAQECLLPQ 73

Query: 299 VLDQHLWQQSGHWDSY---RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           +    LW++SG W++Y      MF++    DT        L P +      +    ++SY
Sbjct: 74  LQPAELWRESGRWETYTKAEGIMFSLIDRRDT-----ELGLGPTHEEVITTIAKEMIRSY 128

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           R+LPV L +  S +R+E      GLMR R F   DA+ F   E    E 
Sbjct: 129 RQLPVNLYQIQSKFRDEIRPRF-GLMRGREFIMKDAYSFHASEDSLKET 176


>gi|329960342|ref|ZP_08298767.1| phosphoribulokinase/uridine kinase family protein [Bacteroides
           fluxus YIT 12057]
 gi|328532780|gb|EGF59562.1| phosphoribulokinase/uridine kinase family protein [Bacteroides
           fluxus YIT 12057]
          Length = 557

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 85/184 (46%), Gaps = 2/184 (1%)

Query: 15  KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVI 73
           K FP+ ++  D+    + +   + V+  +N +   L+  V     IE +   D   +   
Sbjct: 16  KEFPIGSSLLDIYYGFNLNFPYQVVSAKVNNRSEGLNFRVYNNKDIEFLDVRDSSGMRTY 75

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
             S   I+ +AV  ++PE ++ +   +  G++ +    +P   +++A I+K+MQEIIA D
Sbjct: 76  VRSLCFILYKAVSELFPEGKLFVEHPVSKGYFCNLRIGRPIELEDVAAIKKRMQEIIAGD 135

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQ 193
            PF +      +A  +F  +    KV++LE+         Y  G+  D   G  + S G 
Sbjct: 136 IPFHRVECHTTEAVRIFSERGMNDKVKLLET-SGSLYTYYYTLGDTVDYYYGNLLPSAGF 194

Query: 194 VKKF 197
           VK F
Sbjct: 195 VKLF 198


>gi|254517451|ref|ZP_05129507.1| prolyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
 gi|226911200|gb|EEH96401.1| prolyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
          Length = 570

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 76/156 (48%), Gaps = 10/156 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E   H+ + R   +  +A   SG+  +   G K+ + + + +R ++ +   +E     
Sbjct: 17  EAEIDSHKLMLRAGMIRKMA---SGIYNYMPLGLKVLKNVENIVREEMNNAGAQEFLASA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    LWQ+SG WD Y A +  +K  ++     R F L P +      +  + +KSY++L
Sbjct: 74  VQPAELWQESGRWDVYGAELIRLKDRNN-----REFCLGPTHEEVFTDIARNEIKSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           PV L +  + YR+E      G+MR R F   DA+ F
Sbjct: 129 PVNLYQIQTKYRDERRPRF-GVMRSREFIMKDAYSF 163


>gi|299139552|ref|ZP_07032726.1| prolyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8]
 gi|298598480|gb|EFI54644.1| prolyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8]
          Length = 614

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 91/194 (46%), Gaps = 24/194 (12%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQV 299
           ++E   H+ L R     +I + G+G+  +   G +    +I+ +R ++    +E   P +
Sbjct: 18  DAEVASHKLLLRA---GYIRQLGAGIYSYLPLGQRSLNKIIAIVREEMNKIGQEFLLPAL 74

Query: 300 LDQHLWQQSGHWDSYRANMFAVK-------CADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
             + LW++SG W     N+F ++       C   T +++ T            ++  + L
Sbjct: 75  NPRELWEESGRWTGMGQNLFHLQDRKGAELCLAMTHEEVMT------------SIARNEL 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH-NLI 411
           +SY++LP    +  + +R+EP     GL+RVR FT  DA+ F   +   +E  + H +  
Sbjct: 123 RSYKQLPQIWYQIQTKFRDEPRPK-AGLLRVRQFTMKDAYSFDVDQAGLDESYRKHYDTY 181

Query: 412 ISIYKDFGFEKIMV 425
           + I+K  G E + V
Sbjct: 182 VRIFKRCGLEFVAV 195


>gi|239636259|ref|ZP_04677261.1| prolyl-tRNA synthetase [Staphylococcus warneri L37603]
 gi|239597614|gb|EEQ80109.1| prolyl-tRNA synthetase [Staphylococcus warneri L37603]
          Length = 567

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 84/182 (46%), Gaps = 11/182 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+E   HR L +      I +  SG+  +     ++   +   +R ++ K D  EI  P 
Sbjct: 17  EAEALSHRLLLKAG---LIKQSTSGIYSYLPLATRVLNNISKIIREEMEKVDAVEILMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW++SG W +Y   +  +K      ++ R FAL P +     ++    LKSY+ L
Sbjct: 74  LQQAELWEESGRWGAYGPELMRLKD-----RNGREFALGPTHEEVVTSLVRDELKSYKRL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKD 417
           P+ L +  S +R+E      GL+R R F   DA+ F   E   +E  + ++N    I+K 
Sbjct: 129 PLTLFQIQSKFRDEQRPRF-GLLRGREFIMKDAYSFHADEASLDETYQDMYNAYDRIFKR 187

Query: 418 FG 419
            G
Sbjct: 188 VG 189


>gi|34580554|ref|ZP_00142034.1| prolyl-tRNA synthetase [Rickettsia sibirica 246]
 gi|28261939|gb|EAA25443.1| prolyl-tRNA synthetase [Rickettsia sibirica 246]
          Length = 426

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 78/179 (43%), Gaps = 14/179 (7%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  +G+  W   G K+ + +   +R  + K    E+  P +   HLW +SG +D+Y  
Sbjct: 32  IRQQAAGIYTWLPLGLKVLKNIEHIVRLNMNKAGALEVLMPCIQPAHLWMESGRFDNYGK 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M   +   D      T    P N    + +F H +KSY++LP  L      +R+E    
Sbjct: 92  EMLKFQDRHDN-----TLLFGPTNEDMIMDIFRHNIKSYKDLPKNLYHIQWKFRDEIRPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQ----MFNECLKIHNLIISIYKDFGFEKIMVKLSTRP 431
             G+MR R F   DA+ F   E+     +N+  K +   I+ ++D G   I V     P
Sbjct: 147 F-GVMRGREFLMKDAYSFDINEENAVKTYNQMYKAY---INAFRDLGVFVIPVIADNGP 201


>gi|255527316|ref|ZP_05394195.1| conserved hypothetical protein [Clostridium carboxidivorans P7]
 gi|255509006|gb|EET85367.1| conserved hypothetical protein [Clostridium carboxidivorans P7]
          Length = 515

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 73/156 (46%), Gaps = 2/156 (1%)

Query: 43  INGKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE 101
           ING+ C+L+  + E S IE +   D         +   I+ ++V  ++PE Q+ I   + 
Sbjct: 5   INGEYCELTSTIEENSEIEAVNITDKLGSKTFIRTLQFILIKSVFDLFPEAQITIEHSLS 64

Query: 102 DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEI 161
            G + +  K  P + +++ +I+ +M E I ++    K  +  +KA E+F + +   KV +
Sbjct: 65  KGLFGEIHKNTPLTEEDIQKIKIRMNETIQKNIQIKKVSMDRKKAIEIFSTYRMEDKVRL 124

Query: 162 LESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
           L  +     V LY     +D   G    STG +  F
Sbjct: 125 LNHVNTA-TVKLYELDGRYDYFYGSMAYSTGIINVF 159


>gi|116072890|ref|ZP_01470155.1| prolyl-tRNA synthetase [Synechococcus sp. BL107]
 gi|116064416|gb|EAU70177.1| prolyl-tRNA synthetase [Synechococcus sp. BL107]
          Length = 593

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/188 (28%), Positives = 86/188 (45%), Gaps = 8/188 (4%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+E   H+ L R     +I   GSG+  +    WK+ Q + + +R ++ K   +E   PQ
Sbjct: 17  EAEIASHQLLLRG---GYIRRVGSGIYGYLPLMWKVIQRITAIVRDELNKAGAQETLLPQ 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W  Y A    +   +D  +  R   L P +     ++    L+SY++L
Sbjct: 74  LHPAELWQRSGRWQGYTAGEGIMFHLED--RQGRELGLGPTHEEVVTSLAGDLLQSYKQL 131

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE-QMFNECLKIHNLIISIYKD 417
           PV L +  + +R+E      GLMR R F   DA+ F   E  + N  L +      I++ 
Sbjct: 132 PVNLYQVQTKFRDEIRPRF-GLMRGREFIMKDAYSFHASEADLRNTYLDMDQAYRRIFER 190

Query: 418 FGFEKIMV 425
            G   + V
Sbjct: 191 CGLAAVPV 198


>gi|330685674|gb|EGG97315.1| proline--tRNA ligase [Staphylococcus epidermidis VCU121]
          Length = 567

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 84/183 (45%), Gaps = 11/183 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+E   HR L +      I +  SG+  +     ++   +   +R ++ K D  EI  P 
Sbjct: 17  EAEALSHRLLLKAG---LIKQSTSGIYSYLPLATRVLNNISKIIREEMEKVDAVEILMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW++SG W +Y   +  +K      ++ R FAL P +     ++    LKSY+ L
Sbjct: 74  LQQAELWEESGRWGAYGPELMRLKD-----RNGREFALGPTHEEVVTSLVRDELKSYKRL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKD 417
           P+ L +  S +R+E      GL+R R F   DA+ F   E   +E  + ++N    I+K 
Sbjct: 129 PLTLFQIQSKFRDEQRPRF-GLLRGREFIMKDAYSFHADEASLDETYQDMYNAYDRIFKR 187

Query: 418 FGF 420
            G 
Sbjct: 188 VGI 190


>gi|323489584|ref|ZP_08094811.1| prolyl-tRNA synthetase 1 [Planococcus donghaensis MPA1U2]
 gi|323396715|gb|EGA89534.1| prolyl-tRNA synthetase 1 [Planococcus donghaensis MPA1U2]
          Length = 567

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 82/169 (48%), Gaps = 10/169 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E R H+ L R      I ++ SG+  +   G ++ Q + + +R +++  +  EI  P 
Sbjct: 17  DAEVRSHQLLLRAG---FIRQNTSGIYSFLPLGKRVLQKVETVIREEMEAANSVEIFMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY   +  +K  +D     R FAL   +     ++    +KSY++L
Sbjct: 74  LQQAELWQESGRWYSYGDELMRLKDRND-----REFALGATHEEVITSLLRDEIKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
           P+ L +  S +R+E      GL+R R F   DA+ F    +  +E   +
Sbjct: 129 PLNLFQIQSKFRDEKRPRF-GLLRGREFLMKDAYSFHATTESLDETYDV 176


>gi|330837180|ref|YP_004411821.1| AAA ATPase [Spirochaeta coccoides DSM 17374]
 gi|329749083|gb|AEC02439.1| AAA ATPase [Spirochaeta coccoides DSM 17374]
          Length = 586

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/156 (26%), Positives = 77/156 (49%), Gaps = 6/156 (3%)

Query: 39  VAVAINGKVCDLSDPVREGSIEIITP---EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVA 95
           VA+  N ++  LS  +R   +  +TP          V RHS   +++ A   ++P  ++ 
Sbjct: 70  VAILANNELLPLSGRLRANCV--LTPVRLYSEHGKRVYRHSICFLLSRAAHELFPGRRLV 127

Query: 96  IGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKE 155
           IG  + DG+Y+ FD EQ   S ++ ++ ++MQ I+         +LS++++ + F +   
Sbjct: 128 IGHSLGDGYYFSFDDEQSVPSMDIRKLSERMQVIVEAAESVENIHLSYQQSMDYFTAMGF 187

Query: 156 AYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRST 191
                ILE    +  ++LYR G + D+   P V +T
Sbjct: 188 TQTRSILE-YRNEPLISLYRSGSYVDIAYEPLVYNT 222


>gi|58617074|ref|YP_196273.1| prolyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel]
 gi|81311371|sp|Q5FHL5|SYP_EHRRG RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|58416686|emb|CAI27799.1| Prolyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel]
          Length = 426

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 84/179 (46%), Gaps = 14/179 (7%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  SG+  W   G K+ + + + ++ ++ K    E+  P +    LWQ+SG ++ Y +
Sbjct: 32  IRQVASGIYAWLPLGLKVLKNIENVIKEEMNKSGILEVLMPLIQPASLWQESGRYNDYGS 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  +K  ++     R     P +      +    L SY+ LP+ L +    +R+E    
Sbjct: 92  EMLRIKDRNN-----REMVFGPTHEEVVTDLLRTTLTSYKNLPLILYQVQWKFRDELRPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI----ISIYKDFGFEKIMVKLSTRP 431
            +G+MR R F   DA+ F   ++ FN  ++ +NL+    I I++  G   I VK  + P
Sbjct: 147 -YGIMRCREFLMKDAYSF---DKDFNSAIESYNLMFKVYIQIFRRLGLTPIAVKADSGP 201


>gi|255654136|ref|ZP_05399545.1| prolyl-tRNA synthetase [Clostridium difficile QCD-23m63]
 gi|296449825|ref|ZP_06891592.1| proline--tRNA ligase [Clostridium difficile NAP08]
 gi|296877889|ref|ZP_06901909.1| proline--tRNA ligase [Clostridium difficile NAP07]
 gi|296261312|gb|EFH08140.1| proline--tRNA ligase [Clostridium difficile NAP08]
 gi|296431086|gb|EFH16913.1| proline--tRNA ligase [Clostridium difficile NAP07]
          Length = 571

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 78/161 (48%), Gaps = 8/161 (4%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SGV      G ++F+ +   +R ++ K D +EI    +L   LW++SG W +    MF +
Sbjct: 37  SGVYNQLPMGLRVFKKIEQIIREELNKKDCQEILCAALLPSELWKESGRWTAMGEEMFRL 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           K  D T    R + L P +      +    + SY++LP+ L +    YR+E      G+M
Sbjct: 97  K--DRT---EREYCLGPTHEEAFTDIIRQEITSYKQLPLNLYQIQVKYRDERRPRF-GVM 150

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDFGFE 421
           R + FT  DA+ F   ++  ++  + + +  +SI+   G E
Sbjct: 151 RTKTFTMKDAYSFDVDDKGLDKSYQDMFDAYVSIFDRCGLE 191


>gi|239947222|ref|ZP_04698975.1| prolyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes
           scapularis]
 gi|241068545|ref|XP_002408465.1| tRNA synthetases class II, putative [Ixodes scapularis]
 gi|215492453|gb|EEC02094.1| tRNA synthetases class II, putative [Ixodes scapularis]
 gi|239921498|gb|EER21522.1| prolyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes
           scapularis]
          Length = 426

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/176 (26%), Positives = 76/176 (43%), Gaps = 8/176 (4%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  +G+  W   G K+ + + + +R  + K    E+  P +   HLW +SG +D+Y  
Sbjct: 32  IRQQAAGIYTWLPLGLKLLKNIENIVRLNMNKAGALEVLMPCIQPAHLWMESGRFDNYGK 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M   +   D      T    P N      +F H +KSY++LP  L      +R+E    
Sbjct: 92  EMLKFQDRHDN-----TLLFGPTNEDMITDIFRHNIKSYKDLPKNLYHIQWKFRDEIRPR 146

Query: 377 LHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP 431
             G+MR R F   DA+ F   +E       +++   I+ ++D G   I V     P
Sbjct: 147 F-GVMRGREFLMKDAYSFDINEENAVKTYNQMYQAYINTFRDLGVFAIPVIADNGP 201


>gi|304396668|ref|ZP_07378549.1| prolyl-tRNA synthetase [Pantoea sp. aB]
 gi|304356177|gb|EFM20543.1| prolyl-tRNA synthetase [Pantoea sp. aB]
          Length = 572

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 82/176 (46%), Gaps = 9/176 (5%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           TQYL   ++    D   ++ ++ L    I +  SG+  W   G ++ + + + +R ++ +
Sbjct: 4   TQYLLSTQKETPSDAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREEMNN 63

Query: 290 -DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
               EI  P V    LWQ+SG W+ Y   +   + AD   +  R F L P +      + 
Sbjct: 64  AGAVEILMPVVQPADLWQESGRWEEYGPELL--RIAD---RHERPFVLGPTHEEVVTDLI 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
            + L SY++LP+ L +  + +R+E      G+MR R F   DA+ F T +    E 
Sbjct: 119 RNELSSYKQLPLNLYQIQTKFRDEVRPRF-GVMRSREFIMKDAYSFHTSQASLQET 173


>gi|323441042|gb|EGA98749.1| prolyl-tRNA synthetase [Staphylococcus aureus O11]
 gi|323443911|gb|EGB01522.1| prolyl-tRNA synthetase [Staphylococcus aureus O46]
          Length = 567

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 10/168 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E + HR L +      I +  SG+  +     ++   + + +R++++  D  EI  P 
Sbjct: 17  EAEAQSHRLLLKSG---LIKQSTSGIYSYLPLATRVLNNITAIVRQEMERIDSVEILMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW++SG W +Y   +  ++      +  R FAL P +     ++  + LKSY++L
Sbjct: 74  LQQAELWEESGRWGAYGPELMRLQD-----RHGRQFALGPTHEELVTSIVRNELKSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           P+ L +  S +R+E      GL+R R F   DA+ F   E+  ++  +
Sbjct: 129 PMTLFQIQSKFRDEKRPRF-GLLRGREFIMKDAYSFHADEESLDQTYQ 175


>gi|57239072|ref|YP_180208.1| prolyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|58579015|ref|YP_197227.1| prolyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|81819260|sp|Q5HBI6|SYP_EHRRW RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|57161151|emb|CAH58064.1| prolyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|58417641|emb|CAI26845.1| Prolyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
          Length = 426

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 84/179 (46%), Gaps = 14/179 (7%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  SG+  W   G K+ + + + ++ ++ K    E+  P +    LWQ+SG ++ Y +
Sbjct: 32  IRQVASGIYAWLPLGLKVLKNIENVIKEEMNKSGILEVLMPLIQPASLWQESGRYNDYGS 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  +K  ++     R     P +      +    L SY+ LP+ L +    +R+E    
Sbjct: 92  EMLRIKDRNN-----REMVFGPTHEEVVTDLLRTTLTSYKNLPLILYQVQWKFRDELRPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI----ISIYKDFGFEKIMVKLSTRP 431
            +G+MR R F   DA+ F   ++ FN  ++ +NL+    I I++  G   I VK  + P
Sbjct: 147 -YGIMRCREFLMKDAYSF---DKDFNSAIESYNLMFKVYIQIFRRLGLTPIAVKADSGP 201


>gi|295399847|ref|ZP_06809828.1| prolyl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93]
 gi|294978250|gb|EFG53847.1| prolyl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93]
          Length = 567

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 86/183 (46%), Gaps = 11/183 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E + H+ L R      I +  SGV  +   G ++ Q + + +R ++ +    E+  P 
Sbjct: 17  DAEVKSHQLLLRAG---FIRQSASGVYTFLPLGQRVLQKVEAIIREEMNRAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQQSG W SY   +  +K   +     R FAL P +      +    +KSY+ L
Sbjct: 74  LQPAELWQQSGRWYSYGPELMRLKDRHE-----RDFALGPTHEEMITTLVRDEVKSYKRL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKD 417
           P+ L +    +R+E      GL+R R F   DA+ F T ++  +E   K++    +I++ 
Sbjct: 129 PLTLYQIQVKFRDEKRPRF-GLLRGREFIMKDAYSFHTSQESLDETYNKMYEAYSNIFRR 187

Query: 418 FGF 420
            G 
Sbjct: 188 CGL 190


>gi|239826651|ref|YP_002949275.1| prolyl-tRNA synthetase [Geobacillus sp. WCH70]
 gi|259511599|sp|C5D9C3|SYP_GEOSW RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|239806944|gb|ACS24009.1| prolyl-tRNA synthetase [Geobacillus sp. WCH70]
          Length = 567

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 87/183 (47%), Gaps = 11/183 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E + H+ L R      I +  SGV  +   G ++ Q + + +R ++ +    E+  P 
Sbjct: 17  DAEVKSHQLLLRAG---FIRQSASGVYTFLPLGQRVLQKVEAIIREEMNRAGAIELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQQSG W SY   +  +K   +     R FAL P +     A+    +K+Y+ L
Sbjct: 74  LQPAELWQQSGRWYSYGPELMRLKDRHE-----RDFALGPTHEEIITALVRDEVKTYKRL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKD 417
           P+ L +    +R+E      GL+R R F   DA+ F T ++  +E   K++    +I++ 
Sbjct: 129 PLTLYQIQVKFRDEKRPRF-GLLRGREFIMKDAYSFHTSQESLDETYNKMYEAYSNIFRR 187

Query: 418 FGF 420
            G 
Sbjct: 188 CGL 190


>gi|296329234|ref|ZP_06871735.1| proline--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum ATCC
           23726]
 gi|296153590|gb|EFG94407.1| proline--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum ATCC
           23726]
          Length = 567

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 77/166 (46%), Gaps = 10/166 (6%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
           +E+E   H+ + R   +  +A   SG+  +   G++  + + + +R ++ +    E+  P
Sbjct: 16  KEAEIASHKLMLRAGMIKKLA---SGIYAYLPLGYRTIRKIENIIREEMDRAGALELLMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            V    LWQ+SG WD     M  +K   +     R F L P       A+    + SY+ 
Sbjct: 73  VVQPAELWQESGRWDVMGPEMLRLKDRHE-----RDFVLSPTQEEMITAIIRSDISSYKS 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE 403
           LP+ L    + +R+E      GLMR R FT  DA+ F T ++  +E
Sbjct: 128 LPINLYHIQTKFRDERRPRF-GLMRGREFTMKDAYSFHTSQESLDE 172


>gi|56419792|ref|YP_147110.1| prolyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
 gi|81819753|sp|Q5L0J4|SYP_GEOKA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|56379634|dbj|BAD75542.1| proline-tRNA synthetase [Geobacillus kaustophilus HTA426]
          Length = 567

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 80/166 (48%), Gaps = 10/166 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E + H+ L R      I +  SGV  +   G ++ Q + + +R ++ +    E+  P 
Sbjct: 17  DAEVKSHQLLLRAG---FIRQSASGVYTFLPLGQRVLQKVEAIIREEMNRIGAMELFMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQQSG W SY   +  +K   +     R FAL P +     A+    +K+Y+ L
Sbjct: 74  LQPAELWQQSGRWYSYGPELMRLKDRHE-----RDFALGPTHEEMITAIVRDEVKTYKRL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           P+ L +  + +R+E      GL+R R F   DA+ F T ++  +E 
Sbjct: 129 PLVLYQIQTKFRDEKRPRF-GLLRGREFMMKDAYSFHTSKESLDET 173


>gi|317047006|ref|YP_004114654.1| prolyl-tRNA synthetase [Pantoea sp. At-9b]
 gi|316948623|gb|ADU68098.1| prolyl-tRNA synthetase [Pantoea sp. At-9b]
          Length = 572

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/176 (25%), Positives = 82/176 (46%), Gaps = 9/176 (5%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           TQYL    +    D   ++ ++ L    I +  SG+  W   G ++ + + + +R ++ +
Sbjct: 4   TQYLLSTLKETPSDAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLRKVENIVREEMNN 63

Query: 290 DYE-EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
               EI+ P V    LW++SG W+ Y   +  +K   +     R F L P +      + 
Sbjct: 64  AGAIEISMPVVQPADLWEESGRWEQYGPELLRIKDRHE-----RPFVLGPTHEEVVTDLI 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
            + L SY++LP+ L +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 119 RNELSSYKQLPLNLYQIQTKFRDEVRPRF-GVMRSREFIMKDAYSFHTSQESLQET 173


>gi|256846083|ref|ZP_05551541.1| prolyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
 gi|256719642|gb|EEU33197.1| prolyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
          Length = 567

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 77/166 (46%), Gaps = 10/166 (6%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
           +E+E   H+ + R   +  +A   SG+  +   G++  + + + +R ++ +    E+  P
Sbjct: 16  KEAEIASHKLMLRAGMIKKLA---SGIYAYLPLGYRTIKKIENIVREEMDRAGALELLMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            V    LWQ+SG WD     M  +K   +     R F L P       A+    + SY+ 
Sbjct: 73  VVQPAELWQESGRWDVMGPEMLRLKDRHE-----RDFVLSPTQEEMITAIVRSDISSYKS 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE 403
           LP+ L    + +R+E      GLMR R FT  DA+ F T ++  +E
Sbjct: 128 LPINLYHIQTKFRDERRPRF-GLMRGREFTMKDAYSFHTSQESLDE 172


>gi|261419457|ref|YP_003253139.1| prolyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|319766272|ref|YP_004131773.1| prolyl-tRNA synthetase [Geobacillus sp. Y412MC52]
 gi|261375914|gb|ACX78657.1| prolyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|317111138|gb|ADU93630.1| prolyl-tRNA synthetase [Geobacillus sp. Y412MC52]
          Length = 567

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 80/166 (48%), Gaps = 10/166 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E + H+ L R      I +  SGV  +   G ++ Q + + +R ++ +    E+  P 
Sbjct: 17  DAEVKSHQLLLRAG---FIRQSASGVYTFLPLGQRVLQKVEAIIREEMNRIGAMELFMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQQSG W SY   +  +K   +     R FAL P +     A+    +K+Y+ L
Sbjct: 74  LQPAELWQQSGRWYSYGPELMRLKDRHE-----RDFALGPTHEEMITAIVRDEVKTYKRL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           P+ L +  + +R+E      GL+R R F   DA+ F T ++  +E 
Sbjct: 129 PLVLYQIQTKFRDEKRPRF-GLLRGREFMMKDAYSFHTSKESLDET 173


>gi|297530568|ref|YP_003671843.1| prolyl-tRNA synthetase [Geobacillus sp. C56-T3]
 gi|297253820|gb|ADI27266.1| prolyl-tRNA synthetase [Geobacillus sp. C56-T3]
          Length = 567

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 80/166 (48%), Gaps = 10/166 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E + H+ L R      I +  SGV  +   G ++ Q + + +R ++ +    E+  P 
Sbjct: 17  DAEVKSHQLLLRAG---FIRQSASGVYTFLPLGQRVLQKVEAIIREEMNRIGAMELFMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQQSG W SY   +  +K   +     R FAL P +     A+    +K+Y+ L
Sbjct: 74  LQPAELWQQSGRWYSYGPELMRLKDRHE-----RDFALGPTHEEMITAIVRDEVKTYKRL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           P+ L +  + +R+E      GL+R R F   DA+ F T ++  +E 
Sbjct: 129 PLVLYQIQTKFRDEKRPRF-GLLRGREFIMKDAYSFHTSKESLDET 173


>gi|42527722|ref|NP_972820.1| prolyl-tRNA synthetase [Treponema denticola ATCC 35405]
 gi|81831353|sp|Q73KJ8|SYP_TREDE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|41818550|gb|AAS12739.1| prolyl-tRNA synthetase [Treponema denticola ATCC 35405]
          Length = 595

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 82/183 (44%), Gaps = 11/183 (6%)

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHL 304
           H+ L R   + ++A   +G+  +   G K F+ +   +R ++      E   P ++   +
Sbjct: 23  HKLLLRAGMIRNLA---NGLFAYLPLGLKAFRKVEKIIREEMDAIGCLEFKPPVIVPGEI 79

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           WQ+SG WDS    +  +K   +     +   + P       A+  + L SY+  P+   +
Sbjct: 80  WQESGRWDSMGPELLRIKNRLN-----QELVVSPTAEEAFTALLKNELSSYKNYPLLTYQ 134

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC-LKIHNLIISIYKDFGFEKI 423
             + YR+E     +GLMR R FT  DA+ F T ++  +E  L      I I+K  G   I
Sbjct: 135 INTKYRDEIR-PRYGLMRTREFTMKDAYSFHTNDKSLDEAYLSFEKAYIKIFKRCGLTVI 193

Query: 424 MVK 426
            VK
Sbjct: 194 GVK 196


>gi|325475063|gb|EGC78249.1| prolyl-tRNA synthetase [Treponema denticola F0402]
          Length = 595

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 82/183 (44%), Gaps = 11/183 (6%)

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHL 304
           H+ L R   + ++A   +G+  +   G K F+ +   +R ++      E   P ++   +
Sbjct: 23  HKLLLRAGMIRNLA---NGLFAYLPLGLKAFRKVEKIIREEMDAIGCLEFKPPVIVPGEI 79

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           WQ+SG WDS    +  +K   +     +   + P       A+  + L SY+  P+   +
Sbjct: 80  WQESGRWDSMGPELLRIKNRLN-----QELVVSPTAEEAFTALLKNELSSYKNYPLLTYQ 134

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC-LKIHNLIISIYKDFGFEKI 423
             + YR+E     +GLMR R FT  DA+ F T ++  +E  L      I I+K  G   I
Sbjct: 135 INTKYRDEIR-PRYGLMRTREFTMKDAYSFHTNDKSLDEAYLSFEKAYIKIFKRCGLTVI 193

Query: 424 MVK 426
            VK
Sbjct: 194 GVK 196


>gi|332637693|ref|ZP_08416556.1| prolyl-tRNA synthetase [Weissella cibaria KACC 11862]
          Length = 573

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/161 (24%), Positives = 78/161 (48%), Gaps = 8/161 (4%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           +GV  +     ++   + + +R ++ K D  E++ P +L   +WQ+SG +++Y  N+F +
Sbjct: 37  AGVYAYLPLAQRVLNKINAIIREEMEKIDAIEMSAPMLLPAEMWQESGRYETYGPNLFKL 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           K   D     R   L P +      +    +KSY+ LP+ + +  + +R+E      G++
Sbjct: 97  KNRHD-----RDMILGPTHEETMTTLIRDDIKSYKRLPLTVYQIQTKFRDENRPRF-GVL 150

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDFGFE 421
           R R F   DA+ F   +   +E  K + +  I+I+   G +
Sbjct: 151 RGREFIMKDAYSFSVDQDGLDESYKNMESAYINIFDRIGLD 191


>gi|57234857|ref|YP_181114.1| prolyl-tRNA synthetase [Dehalococcoides ethenogenes 195]
 gi|114152187|sp|Q3Z9I5|SYP_DEHE1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|57225305|gb|AAW40362.1| prolyl-tRNA synthetase [Dehalococcoides ethenogenes 195]
          Length = 569

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 99/210 (47%), Gaps = 20/210 (9%)

Query: 218 SRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQ 277
           SR++G    TQ+E+        ++E   H+ L R      IA+  +GV  +    W+  Q
Sbjct: 4   SRLFG---KTQREIPS------DAETISHQLLLRSG---MIAQLTAGVYSFMPLAWRSIQ 51

Query: 278 TLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFAL 336
            + + +R+++ K   +E+  P +    +WQQSG    +   +F +K   D     R   L
Sbjct: 52  KIENIIRQEMNKSGCQELAMPVLQPVEIWQQSGREAPFGQTLFHLKDRKD-----RNLVL 106

Query: 337 KPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT 396
            P +      + +  ++SYR+LP RL +  + +R+EP     GL+RVR F   D + F  
Sbjct: 107 GPTHEEVITDLASRYIQSYRDLPQRLYQIQTKFRDEPR-PRGGLIRVREFIMKDMYSFDA 165

Query: 397 KEQMFNECLK-IHNLIISIYKDFGFEKIMV 425
             +  +E  + +     ++Y+  G E +++
Sbjct: 166 SPEGLDESYQTMKQAYENVYRRCGLESMVI 195


>gi|19704979|ref|NP_602474.1| prolyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|81848323|sp|Q8RIE2|SYP_FUSNN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|19712883|gb|AAL93773.1| Prolyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
          Length = 567

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 77/166 (46%), Gaps = 10/166 (6%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
           +E+E   H+ + R   +  +A   SG+  +   G++  + + + +R ++ +    E+  P
Sbjct: 16  KEAEIASHKLMLRAGMIKKLA---SGIYAYLPLGYRTIKKIENIVREEMDRAGALELLMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            V    LWQ+SG WD     M  +K   +     R F L P       A+    + SY+ 
Sbjct: 73  VVQPAELWQESGRWDVMGPEMLRLKDRHE-----RDFVLSPTQEEMITAIIRSDISSYKS 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE 403
           LP+ L    + +R+E      GLMR R FT  DA+ F T ++  +E
Sbjct: 128 LPINLYHIQTKFRDERRPRF-GLMRGREFTMKDAYSFHTSQESLDE 172


>gi|312869026|ref|ZP_07729203.1| proline--tRNA ligase [Lactobacillus oris PB013-T2-3]
 gi|311095452|gb|EFQ53719.1| proline--tRNA ligase [Lactobacillus oris PB013-T2-3]
          Length = 578

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/161 (25%), Positives = 75/161 (46%), Gaps = 15/161 (9%)

Query: 255 LFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEE---------INTPQVLDQHLW 305
           L HI  + +G I+    G   +  L   + RKI     E         + TP +L   LW
Sbjct: 21  LSHIMMERAGYIYQISAGVWAYLPLAYRVIRKIHQIMHEEMEKAGAFQMETPSMLPADLW 80

Query: 306 QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEF 365
           +Q+G +++Y   ++  K  +D     R + L P +      +    +KSY++LP+ + + 
Sbjct: 81  KQTGRYEAYGDTLYKFKDHND-----REYILGPTDEEAMTEILRDSVKSYKKLPLVVYQI 135

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
              +RNEP    +G++R + F+  DA+ F   E+  +E  +
Sbjct: 136 TDKFRNEPR-PRYGVLRGKEFSMLDAYSFAADEEGLDEAYQ 175


>gi|330828282|ref|YP_004391234.1| Prolyl-tRNA synthetase, family II [Aeromonas veronii B565]
 gi|328803418|gb|AEB48617.1| Prolyl-tRNA synthetase, family II [Aeromonas veronii B565]
          Length = 574

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 8/160 (5%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG+  W   G ++ + + + +R ++ +    E++ P V    LWQ+SG WD Y   +  +
Sbjct: 37  SGMYAWLPTGLRVLKKIENIVREEMNNAGAVEVSMPVVQPAELWQESGRWDDYGPELCRL 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
                T +  R F L P +     A+  + + SY++LP+ L +  + +R+E      G+M
Sbjct: 97  -----TDRHNRPFVLGPTHEEVITALVRYEVNSYKQLPLNLYQIQTKFRDEVRPRF-GVM 150

Query: 382 RVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGF 420
           R R F   DA+ F   KE + +   K+H      +   G 
Sbjct: 151 RGREFLMKDAYSFHIDKESLVDTYEKMHAAYCKAFTRMGL 190


>gi|78185232|ref|YP_377667.1| prolyl-tRNA synthetase [Synechococcus sp. CC9902]
 gi|114152270|sp|Q3AWR9|SYP_SYNS9 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|78169526|gb|ABB26623.1| Prolyl-tRNA synthetase [Synechococcus sp. CC9902]
          Length = 593

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 86/188 (45%), Gaps = 8/188 (4%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E   H+ L R     +I   GSG+  +    WK+ Q + + +R ++     +E   PQ
Sbjct: 17  EAEIASHQLLLRG---GYIRRIGSGIYGYLPLMWKVIQRITAIVRDELNTAGAQETLLPQ 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W  Y A    +   +D  +  R   L P +     ++    L+SY++L
Sbjct: 74  LHPAELWQRSGRWQGYTAGEGIMFHLED--RQGRELGLGPTHEEVVTSLAGELLQSYKQL 131

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE-QMFNECLKIHNLIISIYKD 417
           PV L +  + +R+E      GLMR R F   DA+ F   E  + N  L++      I++ 
Sbjct: 132 PVNLYQVQTKFRDEIRPRF-GLMRGREFIMKDAYSFHANEADLQNTYLEMDQAYRRIFER 190

Query: 418 FGFEKIMV 425
            G   + V
Sbjct: 191 CGLAAVPV 198


>gi|22298319|ref|NP_681566.1| prolyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
 gi|81844949|sp|Q8DKT0|SYP_THEEB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|22294498|dbj|BAC08328.1| proline-tRNA ligase [Thermosynechococcus elongatus BP-1]
          Length = 602

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 79/172 (45%), Gaps = 13/172 (7%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+E   H+ L R   +  IA   SG+  +    W++ Q + + +R ++ +    E   PQ
Sbjct: 17  EAEIPSHKLLLRAGYIRRIA---SGIYSYLPLMWRVLQKVSAIVREEMNRSGALECLLPQ 73

Query: 299 VLDQHLWQQSGHWDSY---RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           +    LWQ+SG WD+Y      MF++     T +  R   L P +     A+    ++SY
Sbjct: 74  LQPAELWQESGRWDTYTKAEGIMFSL-----TDRAQRQLGLGPTHEEVITALAKDLIRSY 128

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
           R+LPV L +  + +R+E      GLMR R F   D + F        E  ++
Sbjct: 129 RQLPVHLYQIQTKFRDEIRPRF-GLMRGREFIMKDGYSFHADVASLKETYQV 179


>gi|147668995|ref|YP_001213813.1| prolyl-tRNA synthetase [Dehalococcoides sp. BAV1]
 gi|189083496|sp|A5FS84|SYP_DEHSB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|146269943|gb|ABQ16935.1| prolyl-tRNA synthetase [Dehalococcoides sp. BAV1]
          Length = 569

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 54/210 (25%), Positives = 99/210 (47%), Gaps = 20/210 (9%)

Query: 218 SRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQ 277
           SR++G    TQ+E+        ++E   H+ L R      IA+  +GV  +    W+  Q
Sbjct: 4   SRLFG---KTQREIPS------DAETISHQLLLRSG---MIAQLTAGVYSFMPLAWRSIQ 51

Query: 278 TLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFAL 336
            + + +R+++ K   +E+  P +    +WQQSG    +   +F +K   D     R   L
Sbjct: 52  KIETIIRQEMNKAGCQELAMPVLQPVEIWQQSGREAPFGQTLFHLKDRKD-----RNLVL 106

Query: 337 KPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-C 395
            P +      + +  ++SYR+LP RL +  + +R+EP     GL+RVR F   D + F  
Sbjct: 107 GPTHEEVITDLASRYIQSYRDLPQRLYQIQAKFRDEPR-PRGGLIRVREFIMKDMYSFDA 165

Query: 396 TKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
           + E + +    +     S+Y+  G E +++
Sbjct: 166 SPEGLDDSYQTMKQAYESVYRRCGLESMVI 195


>gi|237743345|ref|ZP_04573826.1| prolyl-tRNA synthetase [Fusobacterium sp. 7_1]
 gi|229433124|gb|EEO43336.1| prolyl-tRNA synthetase [Fusobacterium sp. 7_1]
          Length = 567

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 77/166 (46%), Gaps = 10/166 (6%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
           +E+E   H+ + R   +  +A   SG+  +   G++  + + + +R ++ +    E+  P
Sbjct: 16  KEAEIASHKLMLRAGMIKKLA---SGIYAYLPLGYRTIRKIENIVREEMDRAGALELLMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            V    LWQ+SG WD     M  +K   +     R F L P       A+    + SY+ 
Sbjct: 73  VVQPAELWQESGRWDVMGPEMLRLKDRHE-----RDFVLSPTQEEMITAIVRSDISSYKS 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE 403
           LP+ L    + +R+E      GLMR R FT  DA+ F T ++  +E
Sbjct: 128 LPINLYHIQTKFRDERRPRF-GLMRGREFTMKDAYSFHTSQESLDE 172


>gi|296110429|ref|YP_003620810.1| prolyl-tRNA synthetase [Leuconostoc kimchii IMSNU 11154]
 gi|295831960|gb|ADG39841.1| prolyl-tRNA synthetase [Leuconostoc kimchii IMSNU 11154]
          Length = 571

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 65/132 (49%), Gaps = 7/132 (5%)

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
           D  E+  P+VL   LWQ+SG + +Y  +++  K   D     R F L P +   +  +  
Sbjct: 65  DANEMLVPEVLPAELWQKSGRYATYGPDLYKFKNRQD-----RDFILGPTHEETYTQLMA 119

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIH 408
             +KSY++LP+ + +    +R+E +    GL+R R F   DA+ F   ++  ++    + 
Sbjct: 120 DEIKSYKKLPLTVYQIQPKFRDE-NRPRFGLLRTREFIMKDAYSFSADQEGLDQTFHAME 178

Query: 409 NLIISIYKDFGF 420
           N  I+I+   G 
Sbjct: 179 NAYINIFDRIGI 190


>gi|50729875|ref|XP_416683.1| PREDICTED: hypothetical protein [Gallus gallus]
          Length = 344

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 58/224 (25%), Positives = 105/224 (46%), Gaps = 28/224 (12%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT--PEDPRSL-AVIRHS 76
           +T  + A  +S    KK+V   ++G+V D+  P+ +   I+ +T   EDP  +      S
Sbjct: 79  STPYNCAMHLSEWHCKKSVLALVDGEVWDMYRPLTKSCEIQFLTFKDEDPEEVNKAYWRS 138

Query: 77  CAHIMAEAVQSIWPE------VQVAIGPIIEDGFYYD------FDKEQPFSSDELAQIEK 124
           CA IMA  ++  + +      V+    P+I   F YD       +  +P + D    + +
Sbjct: 139 CAMIMANVLKRAFKDEYSVTLVKSPEVPVISGAFCYDVILDNRLNDWKP-AKDNFRSLTR 197

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN----VTLYRQGEWF 180
              ++I +D PF   ++  + ARE+F+  K  YK+E++E   A +N    V L+R G++ 
Sbjct: 198 DANKLIDKDLPFETLHVEAKVAREMFQHNK--YKMELIEQ-KASQNMEGIVVLHRFGDFV 254

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTA 224
           D+  GPH+  T     F    ++  A+    S   ++ R  G +
Sbjct: 255 DVSEGPHIPRTS----FCFQYEITAAHILQTSQSELIRRFQGVS 294


>gi|161344091|ref|YP_400976.2| prolyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
 gi|114152269|sp|Q31LT0|SYP_SYNE7 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
          Length = 600

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 76/166 (45%), Gaps = 7/166 (4%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+E   H+ L R   +  IA   SG+  +    W++ + +   +R ++     +E   PQ
Sbjct: 17  EAEIPSHKLLLRAGYIRRIA---SGIYAYLPLMWRVLRKVSQIVREEMDATGAQETLLPQ 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W++Y      +   DD  +  R   L P +     AV    ++SYR+L
Sbjct: 74  LQPAELWQESGRWETYTKAEGIMFSLDD--RQQRQLGLGPTHEEVITAVARDLIRSYRQL 131

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           P  L +  + +R+E      GLMR R F   DA+ F   E+   + 
Sbjct: 132 PQNLYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSFHADEESLRQT 176


>gi|313893443|ref|ZP_07827015.1| proline--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
 gi|313442084|gb|EFR60504.1| proline--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
          Length = 572

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 65/136 (47%), Gaps = 7/136 (5%)

Query: 272 GWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           GW+  + + + +R ++ +   +EI  P +    +W++SG W++Y A M  +    D    
Sbjct: 46  GWRSIKKIEAIVREEMDRASAQEIMMPILQPAEIWKESGRWNAYGAEMMRINDRHDN--- 102

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
              F L P +      +  + + SYR+LPV L +  S +R+E     +GLMR R F   D
Sbjct: 103 --EFCLGPTHEEIITTLVKNEINSYRQLPVNLYQIQSKFRDERR-PRYGLMRSREFIMKD 159

Query: 391 AHVFCTKEQMFNECLK 406
           A+ F   E    E  K
Sbjct: 160 AYSFDVDEAGLEESYK 175


>gi|82750864|ref|YP_416605.1| prolyl-tRNA synthetase [Staphylococcus aureus RF122]
 gi|114152256|sp|Q2YXK5|SYP_STAAB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|82656395|emb|CAI80814.1| prolyl-tRNA synthetase [Staphylococcus aureus RF122]
          Length = 567

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 81/168 (48%), Gaps = 10/168 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E + HR L +      I +  SG+  +     ++   + + +R++++  D  EI  P 
Sbjct: 17  EAEAQSHRLLLKSG---LIKQSTSGIYSYLPLATRVLNNITAIVRQEMERIDSVEILMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW++SG W +Y   +  ++      +  R FAL P +     ++  + LKSY++L
Sbjct: 74  LQQAELWEESGRWGAYGTELMRLQD-----RHGRQFALGPTHEELVTSIVRNELKSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           P+ L +  S +R+E      GL+R R F   DA+ F   E   ++  +
Sbjct: 129 PMTLFQIQSKFRDEKRPRF-GLLRGREFIMKDAYSFHADEASLDQTYQ 175


>gi|73748213|ref|YP_307452.1| prolyl-tRNA synthetase [Dehalococcoides sp. CBDB1]
 gi|114152188|sp|Q3ZZD0|SYP_DEHSC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|73659929|emb|CAI82536.1| prolyl-tRNA synthetase [Dehalococcoides sp. CBDB1]
          Length = 569

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 54/210 (25%), Positives = 99/210 (47%), Gaps = 20/210 (9%)

Query: 218 SRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQ 277
           SR++G    TQ+E+        ++E   H+ L R      IA+  +GV  +    W+  Q
Sbjct: 4   SRLFG---KTQREIPS------DAETISHQLLLRSG---MIAQLTAGVYSFMPLAWRSIQ 51

Query: 278 TLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFAL 336
            + + +R+++ K   +E+  P +    +WQQSG    +   +F +K   D     R   L
Sbjct: 52  KIENIIRQEMNKAGCQELAMPVLQPVEIWQQSGREAPFGQTLFHLKDRKD-----RNLVL 106

Query: 337 KPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-C 395
            P +      + +  ++SYR+LP RL +  + +R+EP     GL+RVR F   D + F  
Sbjct: 107 GPTHEEVITDLASRYIQSYRDLPQRLYQIQAKFRDEPR-PRGGLIRVREFIMKDMYSFDA 165

Query: 396 TKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
           + E + +    +     S+Y+  G E +++
Sbjct: 166 SPEGLDDSYQTMKQAYESVYRRCGLESMVI 195


>gi|314936576|ref|ZP_07843923.1| proline--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
 gi|313655195|gb|EFS18940.1| proline--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
          Length = 566

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 79/165 (47%), Gaps = 8/165 (4%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  SG+  +     ++   +   +R ++++ D  EI  P +    LW++SG W +Y  
Sbjct: 32  IKQSTSGIYSYLPLATRVLNHISRIIREEMENIDAVEILMPALQQAELWEESGRWGAYGP 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            +  +K      ++ R FAL P +     ++    LKSY++LP+ L +  S +R+E    
Sbjct: 92  ELMRLKD-----RNGREFALGPTHEEVVTSIVRDELKSYKQLPLTLFQIQSKFRDEKRPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDFGF 420
             GL+R R F   DA+ F   E   ++  + ++N    I+K  G 
Sbjct: 147 F-GLLRGREFIMKDAYSFHADEASLDQTYQEMYNAYSRIFKRVGI 190


>gi|81169649|gb|ABB57989.1| prolyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
          Length = 606

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 76/166 (45%), Gaps = 7/166 (4%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+E   H+ L R   +  IA   SG+  +    W++ + +   +R ++     +E   PQ
Sbjct: 23  EAEIPSHKLLLRAGYIRRIA---SGIYAYLPLMWRVLRKVSQIVREEMDATGAQETLLPQ 79

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W++Y      +   DD  +  R   L P +     AV    ++SYR+L
Sbjct: 80  LQPAELWQESGRWETYTKAEGIMFSLDD--RQQRQLGLGPTHEEVITAVARDLIRSYRQL 137

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           P  L +  + +R+E      GLMR R F   DA+ F   E+   + 
Sbjct: 138 PQNLYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSFHADEESLRQT 182


>gi|256028463|ref|ZP_05442297.1| prolyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289766384|ref|ZP_06525762.1| prolyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289717939|gb|EFD81951.1| prolyl-tRNA synthetase [Fusobacterium sp. D11]
          Length = 567

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 77/166 (46%), Gaps = 10/166 (6%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
           +E+E   H+ + R   +  +A   SG+  +   G++  + + + +R ++ +    E+  P
Sbjct: 16  KEAEIASHKLMLRAGMIKKLA---SGIYAYLPLGYRTIRKIENIVREEMDRAGALELLMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            V    LWQ+SG WD     M  +K   +     R F L P       A+    + SY+ 
Sbjct: 73  VVQPAELWQESGRWDVMGPEMLRLKDRHE-----RDFVLSPTQEEMITAIVRSDISSYKS 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE 403
           LP+ L    + +R+E      GLMR R FT  DA+ F T ++  +E
Sbjct: 128 LPINLYHIQTKFRDERRPRF-GLMRGREFTMKDAYSFHTSQESLDE 172


>gi|150003988|ref|YP_001298732.1| uridine kinase [Bacteroides vulgatus ATCC 8482]
 gi|254880764|ref|ZP_05253474.1| uridine kinase [Bacteroides sp. 4_3_47FAA]
 gi|294778026|ref|ZP_06743460.1| phosphoribulokinase/uridine kinase family protein [Bacteroides
           vulgatus PC510]
 gi|319639774|ref|ZP_07994504.1| uridine kinase [Bacteroides sp. 3_1_40A]
 gi|149932412|gb|ABR39110.1| uridine kinase [Bacteroides vulgatus ATCC 8482]
 gi|254833557|gb|EET13866.1| uridine kinase [Bacteroides sp. 4_3_47FAA]
 gi|294448084|gb|EFG16650.1| phosphoribulokinase/uridine kinase family protein [Bacteroides
           vulgatus PC510]
 gi|317388591|gb|EFV69440.1| uridine kinase [Bacteroides sp. 3_1_40A]
          Length = 554

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/185 (23%), Positives = 88/185 (47%), Gaps = 4/185 (2%)

Query: 15  KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLS-DPVREGSIEIITPEDPRSLAVI 73
           KNFP+ ++  D+    +  +    V+  +N KV  L+        +E +   +P  +   
Sbjct: 13  KNFPIGSSLLDIYNGFNLDIPYGPVSAKVNNKVEGLNYRAYNNKDVEFLNILNPSGMRTY 72

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
             S   I+ +AV+ ++P+ ++ +   +  G+Y      +    D++++I+++M+EI+  +
Sbjct: 73  VRSLCFILCKAVEDLYPDGKIMLEHPVSKGYYCALQIGRETGLDDVSRIKQRMKEIVEAN 132

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE-WFDLCRGPHVRSTG 192
            PF +      +  ELF  K    KV +LE+  + E  + Y   E   D   G  + STG
Sbjct: 133 IPFHRFECHTTEVVELFRRKGMMDKVRLLET--SGELYSYYYTLEDTIDYYYGSLLPSTG 190

Query: 193 QVKKF 197
            ++KF
Sbjct: 191 YIRKF 195


>gi|228474993|ref|ZP_04059721.1| proline--tRNA ligase [Staphylococcus hominis SK119]
 gi|228270978|gb|EEK12366.1| proline--tRNA ligase [Staphylococcus hominis SK119]
          Length = 566

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 79/165 (47%), Gaps = 8/165 (4%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  SG+  +     ++   +   +R ++++ D  EI  P +    LW++SG W +Y  
Sbjct: 32  IKQSTSGIYSYLPLATRVLNHISRIIREEMENIDAVEILMPALQQAELWEESGRWGAYGP 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            +  +K      ++ R FAL P +     ++    LKSY++LP+ L +  S +R+E    
Sbjct: 92  ELMRLKD-----RNGREFALGPTHEEVVTSIVRDELKSYKQLPLTLFQIQSKFRDEKRPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDFGF 420
             GL+R R F   DA+ F   E   ++  + ++N    I+K  G 
Sbjct: 147 F-GLLRGREFIMKDAYSFHADEASLDQTYQEMYNAYSRIFKRVGI 190


>gi|56752145|ref|YP_172846.1| prolyl-tRNA synthetase [Synechococcus elongatus PCC 6301]
 gi|81820564|sp|Q5N044|SYP_SYNP6 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|56687104|dbj|BAD80326.1| proline-tRNA ligase [Synechococcus elongatus PCC 6301]
          Length = 600

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 76/166 (45%), Gaps = 7/166 (4%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+E   H+ L R   +  IA   SG+  +    W++ + +   +R ++     +E   PQ
Sbjct: 17  EAEIPSHKLLLRAGYIRRIA---SGIYAYLPLMWRVLRKVSQIVREEMDATGAQETLLPQ 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W++Y      +   DD  +  R   L P +     AV    ++SYR+L
Sbjct: 74  LQPAELWQESGRWETYAKAEGIMFSLDD--RQQRQLGLGPTHEEVITAVARDLIRSYRQL 131

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           P  L +  + +R+E      GLMR R F   DA+ F   E+   + 
Sbjct: 132 PQNLYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSFHADEESLRQT 176


>gi|218961590|ref|YP_001741365.1| Uridine kinase [Candidatus Cloacamonas acidaminovorans]
 gi|167730247|emb|CAO81159.1| Uridine kinase [Candidatus Cloacamonas acidaminovorans]
          Length = 553

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 80/160 (50%), Gaps = 6/160 (3%)

Query: 53  PVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQ-VAIGPIIEDGFYYDFDKE 111
           P RE  I+ IT   P    + + S   IMA+A+ ++      + +   I DG + +    
Sbjct: 54  PDRETLIDFITYLHPEGYRIYQDSVIFIMAKALHTLMGTAHSLVVEHSIADGVFCEVFNT 113

Query: 112 QPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPA--KE 169
           Q F+  + ++++  MQ I+  D P  K  +  E+A ++F +     + ++L+++    +E
Sbjct: 114 QNFTEADCSRLKTAMQNIVDSDLPIEKIMVKTEEALDIFSAMG---RNDVLKNLKYHYQE 170

Query: 170 NVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWR 209
           NV +YR G+++D    P V  TG+VK F  + +  G   R
Sbjct: 171 NVEIYRCGKYYDCFVHPLVERTGKVKTFDIVYRSPGFILR 210


>gi|33866303|ref|NP_897862.1| prolyl-tRNA synthetase [Synechococcus sp. WH 8102]
 gi|81835080|sp|Q7U5D6|SYP_SYNPX RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|33639278|emb|CAE08286.1| Prolyl-tRNA synthetase [Synechococcus sp. WH 8102]
          Length = 593

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 51/188 (27%), Positives = 84/188 (44%), Gaps = 8/188 (4%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+E   H+ L R   +  +   GSG+  +    WK+ Q + + +R ++ +    E   PQ
Sbjct: 17  EAEITSHQLLLRGGFIRRV---GSGIYAYLPMMWKVLQRITTIIREEMNRAGALETLLPQ 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W  Y A    +   +D  +  R   L P +     ++    L+SYR+L
Sbjct: 74  LHPSELWQRSGRWQGYTAGEGIMFHLED--RQGRELGLGPTHEEVITSLAGELLRSYRQL 131

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII-SIYKD 417
           PV L +  + +R+E      GLMR R F   DA+ F   E        + +     I++ 
Sbjct: 132 PVNLYQVQTKFRDEIRPRF-GLMRGREFIMKDAYSFHADEADLQATYAVMDQAYRRIFER 190

Query: 418 FGFEKIMV 425
            G E + V
Sbjct: 191 CGLEAVPV 198


>gi|116333948|ref|YP_795475.1| prolyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
 gi|122269368|sp|Q03QS8|SYP_LACBA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|116099295|gb|ABJ64444.1| Prolyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
          Length = 569

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 72/142 (50%), Gaps = 15/142 (10%)

Query: 287 IKDDYEEINT-----PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           I+++ E+IN      P VL   LWQ+SG +++Y  N+F  K   D+      F L P + 
Sbjct: 57  IREEMEKINAVEMLMPAVLPASLWQESGRYETYGPNLFKFKNRHDS-----DFILAPTHE 111

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
                +    +KSY+ LP+ + +    YR+E     +GL+R R F   DA+ F   ++  
Sbjct: 112 ETFTMLVRDAIKSYKRLPLVMYQIQPKYRDEDR-PRYGLLRGREFIMKDAYSFSLSDEDL 170

Query: 402 NECLKIHNLIISIYKDFGFEKI 423
           +   +I+N +   Y++  F++I
Sbjct: 171 D---RIYNQMEQAYENI-FDRI 188


>gi|188533062|ref|YP_001906859.1| prolyl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
 gi|226701287|sp|B2VDZ9|SYP_ERWT9 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|188028104|emb|CAO95961.1| Prolyl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
          Length = 572

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 46/176 (26%), Positives = 80/176 (45%), Gaps = 9/176 (5%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           TQYL    +    D   ++ ++ L    I +  SG+  W   G ++ + + + +R ++ +
Sbjct: 4   TQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREEMNN 63

Query: 290 DYE-EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
               EI+ P V    LWQ+SG W+ Y   +  +    D     R F L P +      + 
Sbjct: 64  AGAIEISMPVVQPADLWQESGRWEQYGPELLRLVDRSD-----RPFVLGPTHEEVITDLI 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
            + L SY++LP+ L +  + +R+E      G+MR R F   DA+ F T +    E 
Sbjct: 119 RNELSSYKQLPLNLFQIQTKFRDEVRPRF-GVMRSREFIMKDAYSFHTSQGSLQET 173


>gi|300087319|ref|YP_003757841.1| prolyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
 gi|299527052|gb|ADJ25520.1| prolyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
          Length = 573

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 99/212 (46%), Gaps = 20/212 (9%)

Query: 217 LSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIF 276
           LS+++G    TQ+E+        E+E   HR L R      IA+  +GV  +    W+  
Sbjct: 3   LSQLFG---KTQREIPG------EAETISHRLLLRA---GMIAQLTAGVYSYLPPAWRTS 50

Query: 277 QTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFA 335
           + ++  +R ++     +EI  P +    LWQ+SG   ++  N+F +     T +   T A
Sbjct: 51  RKIMDIIRDEMDAAGCQEITMPVLQPIELWQKSGRGAAFGDNLFQL-----TDRKEHTLA 105

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC 395
           L P +      + +  ++SYR+LP RL +  +  R+EP     GL+RVR F   D + F 
Sbjct: 106 LGPTHEEVVSDLASRYIQSYRDLPQRLYQIQTKLRDEPR-PRGGLIRVREFIMKDMYSFD 164

Query: 396 TKEQMFNECL-KIHNLIISIYKDFGFEKIMVK 426
             E    E   ++     +IY+  G + + ++
Sbjct: 165 ADEAGLEESYQRMVQAYKNIYRRCGLKAMAIE 196


>gi|318041155|ref|ZP_07973111.1| prolyl-tRNA synthetase [Synechococcus sp. CB0101]
          Length = 609

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 77/168 (45%), Gaps = 11/168 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQ 298
           E+E   H+ L R     +I   GSG+  +    W++ Q + + +R ++      E   PQ
Sbjct: 17  EAEIPSHKLLLRA---GYIRRVGSGIYAYLPLLWRVLQKISAIVREELNAAGALETLLPQ 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W  Y A    +   +D  +  R   L P +     A+    L+SYR+L
Sbjct: 74  LQPAELWQRSGRWAGYTAGEGIMFHLED--RQGRELGLGPTHEEVITALAGDLLRSYRQL 131

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           PV L +  + +R+E      GLMR R F   DA+ F   E     CLK
Sbjct: 132 PVNLYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSFHADE----ACLK 174


>gi|325972599|ref|YP_004248790.1| ATPase AAA [Spirochaeta sp. Buddy]
 gi|324027837|gb|ADY14596.1| AAA ATPase [Spirochaeta sp. Buddy]
          Length = 561

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 62/124 (50%), Gaps = 1/124 (0%)

Query: 72  VIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIA 131
           + RHS  +++  AV  ++P+ ++ IG  + DG+Y+ FD E   S  ++  IE+ M+ ++ 
Sbjct: 79  IYRHSLCYLLCAAVSMLYPQRRLVIGHSLGDGYYFSFDDELMLSGSDILAIEQAMRTLVE 138

Query: 132 RDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRST 191
           ++    +  L ++ A   FE         +L S   +  V LYR   + D+   P +  T
Sbjct: 139 QNLSIEEITLPYQSALTYFEQNHFDQTAALL-STRNEPKVNLYRLSGYLDISYEPLLNKT 197

Query: 192 GQVK 195
           G +K
Sbjct: 198 GLMK 201


>gi|308185763|ref|YP_003929894.1| Prolyl-tRNA synthetase [Pantoea vagans C9-1]
 gi|308056273|gb|ADO08445.1| Prolyl-tRNA synthetase [Pantoea vagans C9-1]
          Length = 572

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 46/176 (26%), Positives = 82/176 (46%), Gaps = 9/176 (5%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           TQYL   ++    D   ++ ++ L    I +  SG+  W   G ++ + + + +R ++ +
Sbjct: 4   TQYLLSTQKETPSDAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREEMNN 63

Query: 290 -DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
               EI  P V    LWQ+SG W+ Y   +   + AD   +  R F L P +      + 
Sbjct: 64  AGAVEILMPVVQPADLWQESGRWEEYGPELL--RIAD---RHERPFVLGPTHEEVVTDLI 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
            + L SY++LP+ L +  + +R+E      G+MR R F   DA+ F   ++   E 
Sbjct: 119 RNELSSYKQLPLNLYQIQTKFRDEVRPRF-GVMRSREFIMKDAYSFHVSQESLQET 173


>gi|295426319|ref|ZP_06818978.1| proline--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
 gi|295063992|gb|EFG54941.1| proline--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
          Length = 566

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 76/150 (50%), Gaps = 16/150 (10%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQH-----LWQQSGHW 311
           +I +  +GV  +   G+++ +   + M    +D+ E+IN P+++  H     LWQ+SG +
Sbjct: 31  YIRQVTAGVYSYLPLGFRVLRKAENIM----EDEMEKINVPEMMMPHFLPATLWQESGRY 86

Query: 312 DSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRN 371
             Y A MF +K      +  R   L P +      +    LKSY+++P+ L +  + +R+
Sbjct: 87  KKYGAEMFKLKD-----RHGRESLLGPTHEETFTEIIAKNLKSYKQMPIALYQIQTKFRD 141

Query: 372 EPSGSLHGLMRVRGFTQDDAHVF-CTKEQM 400
           E      GL+R R F   DA+ F  T+EQ+
Sbjct: 142 ENRPRF-GLLRGREFVMLDAYSFAATREQL 170


>gi|242398996|ref|YP_002994420.1| Prolyl-tRNA synthetase [Thermococcus sibiricus MM 739]
 gi|242265389|gb|ACS90071.1| Prolyl-tRNA synthetase [Thermococcus sibiricus MM 739]
          Length = 488

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 91/394 (23%), Positives = 166/394 (42%), Gaps = 68/394 (17%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVL-DQHLWQQSGHWDSYRANMFAV 321
           G+  W   G +I + + + +  + ++  + E+  P ++ +    +++ H   +   +  V
Sbjct: 41  GMNVWLPYGLRIMRNIENLIHMEMVRTGHNEVLFPALIPESEFEREAEHIAGFHGEVLWV 100

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
             A +   D++   L+P +      +FN  ++S+ +LP ++ +  +VYR E +     L+
Sbjct: 101 THAGERPLDVK-LILRPTSETAMYPMFNLWIRSHADLPFKIYQIVNVYRYE-TKHTRPLI 158

Query: 382 RVRG----FTQDDAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
           RVR     F    AH  F   E+   E L+I +   ++ K+     I   +S RP+    
Sbjct: 159 RVREISRFFESHTAHDSFEDAERQIREDLEIFD---NLAKNLALPYI---VSKRPD---- 208

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
               WD                             GAFY    E I+ D  GR  Q GT+
Sbjct: 209 ----WDKFP--------------------------GAFYSLGAEVIMPD--GRTLQIGTM 236

Query: 497 QVDFNLPSRF-NAFYVNSHSEKCHPVMIHRAVFGSIERFI----GIMIENFKGNLPLWLS 551
               +    F  A+ +   +E+     +H+  FG  ER +    G+  ++    LP  ++
Sbjct: 237 H---HYKQNFAKAYEITYETEEGTHEYVHQTTFGMSERLVAAIMGVHGDDSGLVLPPTIA 293

Query: 552 PIQAIVTTITSSAV-----EYAQEIANLLKSHHLSIETDFRNET-INYKIREHSIKKIPI 605
           P+Q +V  I           YA+EIA  LK+  L I  D R +     K  +  IK +P+
Sbjct: 294 PVQVVVIPIPMKESPYDVNAYAKEIAEELKTAGLRIHVDDREDVRPGRKFYDWEIKGVPL 353

Query: 606 IIICGDKEASE-RSIGIRR--FGSTTTQKVSLLD 636
            I  G K+  E +++  RR  F   T ++ +L++
Sbjct: 354 RIEVGPKDVEENQAVFARRDTFEKFTVKRENLVE 387


>gi|317476420|ref|ZP_07935669.1| uridine kinase [Bacteroides eggerthii 1_2_48FAA]
 gi|316907446|gb|EFV29151.1| uridine kinase [Bacteroides eggerthii 1_2_48FAA]
          Length = 557

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 42/184 (22%), Positives = 86/184 (46%), Gaps = 2/184 (1%)

Query: 15  KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVI 73
           K FP+ ++  D+    + +   + V+  +N +   L+  V     +E +   D   +   
Sbjct: 16  KEFPIGSSLLDIYYGFNLNFPYQVVSAKVNNRSEGLNFRVYNNKDVEFLDVRDSSGMRTY 75

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
             S   I+ +AV  ++P+ ++ +   +  G++ +    +P   ++++ I+++MQEIIA D
Sbjct: 76  VRSLCFILYKAVNELFPDGKLFVEHPVSKGYFCNLRIGRPIELEDVSAIKRRMQEIIAED 135

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQ 193
            PF +      +A  +F  +    KV++LE+         Y  G+  D   G  + STG 
Sbjct: 136 IPFRRTECHTTEAVRVFSERGMNDKVKLLET-SGSIYTYYYTLGDTVDYYYGNLLPSTGF 194

Query: 194 VKKF 197
           +K F
Sbjct: 195 IKLF 198


>gi|169827162|ref|YP_001697320.1| prolyl-tRNA synthetase 1 [Lysinibacillus sphaericus C3-41]
 gi|226701308|sp|B1HQZ9|SYP_LYSSC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|168991650|gb|ACA39190.1| Prolyl-tRNA synthetase 1 [Lysinibacillus sphaericus C3-41]
          Length = 568

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 81/170 (47%), Gaps = 18/170 (10%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINT--- 296
           ++E + H++L R      I ++ SGV  +      + + ++S +   I+++ E IN+   
Sbjct: 17  DAEVKSHKQLLRAG---FIRQNTSGVYSY----LPLAKRVLSKIETIIREEMEAINSIEL 69

Query: 297 --PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
             P +    LWQ+SG W+ Y   +  +K   D     R FAL P +      +    +KS
Sbjct: 70  LMPSLQSAELWQESGRWEKYGPELMRLKDRHD-----RDFALGPTHEEVITTLVRDEIKS 124

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           Y++LP+ L +  + +R+E      GL+R R F   DA+ F    +  +E 
Sbjct: 125 YKKLPLTLYQIQTKFRDEKRPRF-GLLRGREFIMKDAYSFHASRESLDET 173


>gi|49486102|ref|YP_043323.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|81175024|sp|Q6G9V0|SYP_STAAS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|49244545|emb|CAG42974.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MSSA476]
          Length = 567

 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 81/168 (48%), Gaps = 10/168 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E + HR L +      I +  SG+  +     ++   + + +R++++  D  EI  P 
Sbjct: 17  EAEAQSHRLLLKSG---LIKQSTSGIYSYLPLATRVLNNITAIVRQEMERIDSVEILMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW++SG W +Y   +  ++      +  R FAL P +     ++  + LKSY++L
Sbjct: 74  LQQAELWEESGRWGAYGPELMRLQD-----RHGRQFALGPTHEELVTSIVRNELKSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           P+ L +  S +R+E      GL+R R F   DA+ F   E   ++  +
Sbjct: 129 PMTLFQIQSKFRDEKRPRF-GLLRGREFIMKDAYSFHADEASLDQTYQ 175


>gi|319401447|gb|EFV89657.1| prolyl-tRNA synthetase [Staphylococcus epidermidis FRI909]
          Length = 567

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 90/201 (44%), Gaps = 26/201 (12%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E   HR L +      I +  SG+  +     ++   +   +R +++  D  EI  P 
Sbjct: 17  EAEALSHRLLLKAG---LIKQSTSGIYSYLPLATRVLNNISKIIREEMESIDAVEILMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW++SG W +Y   +  +K      ++ R FAL P +     ++    LKSY++L
Sbjct: 74  LQQAELWEESGRWSAYGPELMRLKD-----RNGREFALGPTHEEVVTSLVRDELKSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+ L +  S YR+E      GL+R R F   DA+ F   E   +          + Y+D 
Sbjct: 129 PLTLFQIQSKYRDEKRPRF-GLLRGREFLMKDAYSFHFDEASLD----------ATYQD- 176

Query: 419 GFEKIMVKLSTRPEKRVGSDA 439
                M +  +R  KRVG +A
Sbjct: 177 -----MYQAYSRIFKRVGINA 192


>gi|282927605|ref|ZP_06335221.1| prolyl-tRNA synthetase [Staphylococcus aureus A10102]
 gi|282590608|gb|EFB95685.1| prolyl-tRNA synthetase [Staphylococcus aureus A10102]
          Length = 567

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 81/168 (48%), Gaps = 10/168 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E + HR L +      I +  SG+  +     ++   + + +R++++  D  EI  P 
Sbjct: 17  EAEAQSHRLLLKSG---LIKQSTSGIYSYLPLATRVLNNITAIVRQEMERIDSVEILMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW++SG W +Y   +  ++      +  R FAL P +     ++  + LKSY++L
Sbjct: 74  LQQAELWEESGRWGAYGPELMRLQD-----RHGRQFALGPTHEELVTSIVRNELKSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           P+ L +  S +R+E      GL+R R F   DA+ F   E   ++  +
Sbjct: 129 PMTLFQIQSKFRDEKRPRF-GLLRGREFIMKDAYSFHADEASLDQTYQ 175


>gi|163854968|ref|YP_001629266.1| prolyl-tRNA synthetase [Bordetella petrii DSM 12804]
 gi|226699121|sp|A9I4I5|SYP_BORPD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|163258696|emb|CAP40995.1| proS [Bordetella petrii]
          Length = 576

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 85/184 (46%), Gaps = 11/184 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQ 298
           E+E   HR + R   +  +A    G+  +   G K+ + + + +R ++      E+  P 
Sbjct: 17  EAEVASHRLMTRAGMIRKLA---GGIYTYMPLGLKVIRKIEAIVRAEMDAAGAIELLMPV 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    LWQ+SG W+ Y A +  +K      +  R F L+P +      +  + + SYR+L
Sbjct: 74  VQPAELWQESGRWEQYGAELLRIKD-----RHQRDFVLQPTSEEVITDIARNEIHSYRQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKD 417
           P+      + +R+E      GLMR R FT  DA+ F   E    +   K+++  + I++ 
Sbjct: 129 PLNFYHIQTKFRDERRPRF-GLMRGREFTMKDAYSFDRDEAGAQQSYDKMYDAYMRIFER 187

Query: 418 FGFE 421
            G +
Sbjct: 188 LGLQ 191


>gi|292489201|ref|YP_003532088.1| prolyl-tRNA synthetase [Erwinia amylovora CFBP1430]
 gi|292898564|ref|YP_003537933.1| prolyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
 gi|291198412|emb|CBJ45519.1| prolyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
 gi|291554635|emb|CBA22316.1| Prolyl-tRNA synthetase [Erwinia amylovora CFBP1430]
          Length = 572

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 46/176 (26%), Positives = 80/176 (45%), Gaps = 9/176 (5%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           TQYL    +    D   ++ ++ L    I +  SG+  W   G ++ + + + +R ++ +
Sbjct: 4   TQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREEMNN 63

Query: 290 DYE-EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
               EI+ P V    LWQ+SG W+ Y   +  +    D     R F L P +      + 
Sbjct: 64  AGAIEISMPVVQPADLWQESGRWEQYGPELLRLVDRSD-----RPFVLGPTHEEVITDLI 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
            + L SY++LP+ L +  + +R+E      G+MR R F   DA+ F T +    E 
Sbjct: 119 RNELSSYKQLPLNLFQIQTKFRDEVRPRF-GVMRSREFIMKDAYSFHTSQGSLQET 173


>gi|229544430|ref|ZP_04433488.1| prolyl-tRNA synthetase [Bacillus coagulans 36D1]
 gi|229324915|gb|EEN90592.1| prolyl-tRNA synthetase [Bacillus coagulans 36D1]
          Length = 569

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 46/168 (27%), Positives = 81/168 (48%), Gaps = 10/168 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E + H+ L R   +  IA   SGV  +     K+   + + +R +++     E+  P 
Sbjct: 17  EAEVKSHQLLLRAGYIRQIA---SGVYTYLPLAKKVLHKIEAIIREELEAIGSMELLMPS 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY  ++  +K   +     R FAL P +     ++  + +KSY+ L
Sbjct: 74  LQPAELWQESGRWYSYGPDLMRLKDRHE-----RDFALGPTHEEVITSLIRNEVKSYKRL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           P+ L +  + +R+E      GL+R R F   DA+ F   ++  +E  K
Sbjct: 129 PLSLYQIQTKFRDEKRPRF-GLLRGREFIMKDAYSFHANKESLDETYK 175


>gi|221194513|ref|ZP_03567570.1| prolyl-tRNA synthetase [Atopobium rimae ATCC 49626]
 gi|221185417|gb|EEE17807.1| prolyl-tRNA synthetase [Atopobium rimae ATCC 49626]
          Length = 571

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 73/160 (45%), Gaps = 10/160 (6%)

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHL 304
           HR L R      I +  +G+  +    W+  + +   +R ++     +EI  P +    L
Sbjct: 27  HRLLLRAG---MIRKTAAGLYSYLPLAWRSLRKIEEIIRDEMDGIGAQEILVPILTPAEL 83

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SG WD Y   +  +    +     R FAL P +      +  + LKSY++LPV L +
Sbjct: 84  WEESGRWDVYGPELMRLHDRHE-----RKFALGPTHEETFTDLVRNELKSYKQLPVTLYQ 138

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
               +R+E      GLMR R F   DA+ F + ++   EC
Sbjct: 139 IQDKFRDEMRPRF-GLMRGREFIMKDAYSFSSTQESLQEC 177


>gi|163781697|ref|ZP_02176697.1| prolyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159882917|gb|EDP76421.1| prolyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 570

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 95/204 (46%), Gaps = 19/204 (9%)

Query: 234 YLYFLEE----SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-K 288
           +LY L+E    +E   HR L   +    I +  +G+      GW++ + + S +R+++ +
Sbjct: 7   FLYTLKEDPAEAEAPSHRLL---LKAGFIKQVSAGIYEILPAGWRVIRKIESIVRKEMDR 63

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
              +E+    +    LW+++G WD+Y   +F +K      +  R + L P +      + 
Sbjct: 64  SGAQELLLTVLNPAELWKETGRWDTYGNELFRLKD-----RSGREYCLGPTHEEEITDLV 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
              + SYR+LPV L +    +R+E      GL+R R F   DA+ F   E  F+  +   
Sbjct: 119 RKVVHSYRQLPVTLYQIQVKFRDEKRPRF-GLIRGREFIMKDAYSFDADE--FSATMSYE 175

Query: 409 NLIIS---IYKDFGFEKIMVKLST 429
           N+  +   ++K    E IM + ST
Sbjct: 176 NMKFAYDRVFKKLRLEVIMAQAST 199


>gi|298694555|gb|ADI97777.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED133]
          Length = 567

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 81/168 (48%), Gaps = 10/168 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E + HR L +      I +  SG+  +     ++   + + +R++++  D  EI  P 
Sbjct: 17  EAEAQSHRLLLKSG---LIKQSTSGIYSYLPLATRVLNNITAIVRQEMERIDSVEILMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW++SG W +Y   +  ++      +  R FAL P +     ++  + LKSY++L
Sbjct: 74  LQQAELWEESGRWGAYGPELMRLQD-----RHGRQFALGPTHEELVTSIVRNELKSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           P+ L +  S +R+E      GL+R R F   DA+ F   E   ++  +
Sbjct: 129 PMTLFQIQSKFRDEKRPRF-GLLRGREFIMKDAYSFHADEASLDQTYQ 175


>gi|126654116|ref|ZP_01725934.1| prolyl-tRNA synthetase [Bacillus sp. B14905]
 gi|126589396|gb|EAZ83546.1| prolyl-tRNA synthetase [Bacillus sp. B14905]
          Length = 568

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 81/170 (47%), Gaps = 18/170 (10%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINT--- 296
           ++E + H++L R      I ++ SGV  +      + + ++S +   I+++ E IN+   
Sbjct: 17  DAEVKSHKQLLRAG---FIRQNTSGVYSY----LPLAKRVLSKIETIIREEMEAINSIEL 69

Query: 297 --PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
             P +    LWQ+SG W+ Y   +  +K   D     R FAL P +      +    +KS
Sbjct: 70  LMPSLQSAELWQESGRWEKYGPELMRLKDRHD-----RDFALGPTHEEVITTLVRDEIKS 124

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           Y++LP+ L +  + +R+E      GL+R R F   DA+ F    +  +E 
Sbjct: 125 YKKLPLTLYQIQTKFRDEKRPRF-GLLRGREFIMKDAYSFHASRESLDET 173


>gi|87161679|ref|YP_493853.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|88194973|ref|YP_499773.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|151221385|ref|YP_001332207.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|161509429|ref|YP_001575088.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|221142497|ref|ZP_03566990.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           JKD6009]
 gi|262048155|ref|ZP_06021042.1| prolyl-tRNA synthetase [Staphylococcus aureus D30]
 gi|262051325|ref|ZP_06023548.1| prolyl-tRNA synthetase [Staphylococcus aureus 930918-3]
 gi|282920507|ref|ZP_06328228.1| prolyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|284024256|ref|ZP_06378654.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 132]
 gi|294848259|ref|ZP_06789006.1| prolyl-tRNA synthetase [Staphylococcus aureus A9754]
 gi|304381173|ref|ZP_07363826.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|114152254|sp|Q2FHH5|SYP_STAA3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|114152255|sp|Q2G1Z4|SYP_STAA8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|172049021|sp|A6QGG3|SYP_STAAE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|189083518|sp|A8Z3U3|SYP_STAAT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|87127653|gb|ABD22167.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87202531|gb|ABD30341.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|150374185|dbj|BAF67445.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|160368238|gb|ABX29209.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|259160700|gb|EEW45721.1| prolyl-tRNA synthetase [Staphylococcus aureus 930918-3]
 gi|259163721|gb|EEW48276.1| prolyl-tRNA synthetase [Staphylococcus aureus D30]
 gi|282594169|gb|EFB99156.1| prolyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|294825059|gb|EFG41481.1| prolyl-tRNA synthetase [Staphylococcus aureus A9754]
 gi|302751086|gb|ADL65263.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           JKD6008]
 gi|304340156|gb|EFM06097.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|315198505|gb|EFU28834.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS01]
 gi|320140920|gb|EFW32767.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA131]
 gi|320144364|gb|EFW36130.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA177]
 gi|329313933|gb|AEB88346.1| Prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus T0131]
 gi|329727831|gb|EGG64282.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus 21189]
          Length = 567

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 81/168 (48%), Gaps = 10/168 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E + HR L +      I +  SG+  +     ++   + + +R++++  D  EI  P 
Sbjct: 17  EAEAQSHRLLLKSG---LIKQSTSGIYSYLPLATRVLNNITAIVRQEMERIDSVEILMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW++SG W +Y   +  ++      +  R FAL P +     ++  + LKSY++L
Sbjct: 74  LQQAELWEESGRWGAYGPELMRLQD-----RHGRQFALGPTHEELVTSIVRNELKSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           P+ L +  S +R+E      GL+R R F   DA+ F   E   ++  +
Sbjct: 129 PMTLFQIQSKFRDEKRPRF-GLLRGREFIMKDAYSFHADEASLDQTYQ 175


>gi|57651833|ref|YP_186139.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
 gi|81175020|sp|Q5HGG8|SYP_STAAC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|57286019|gb|AAW38113.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
          Length = 567

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 81/168 (48%), Gaps = 10/168 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E + HR L +      I +  SG+  +     ++   + + +R++++  D  EI  P 
Sbjct: 17  EAEAQSHRLLLKSG---LIKQSTSGIYSYLPLATRVLNNITAIVRQEMERIDSVEILMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW++SG W +Y   +  ++      +  R FAL P +     ++  + LKSY++L
Sbjct: 74  LQQAELWEESGRWGAYGPELMRLQD-----RHGRQFALGPTHEELVTSIVRNELKSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           P+ L +  S +R+E      GL+R R F   DA+ F   E   ++  +
Sbjct: 129 PMTLFQIQSKFRDEKRPRF-GLLRGREFIMKDAYSFHADEASLDQTYQ 175


>gi|15924253|ref|NP_371787.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50]
 gi|15926846|ref|NP_374379.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus N315]
 gi|21282875|ref|NP_645963.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
 gi|148267753|ref|YP_001246696.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|150393812|ref|YP_001316487.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|156979584|ref|YP_001441843.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
 gi|253315619|ref|ZP_04838832.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           CF-Marseille]
 gi|253733499|ref|ZP_04867664.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TCH130]
 gi|255006050|ref|ZP_05144651.2| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Mu50-omega]
 gi|257795681|ref|ZP_05644660.1| prolyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|258416084|ref|ZP_05682352.1| prolyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|258421667|ref|ZP_05684591.1| prolyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|258434823|ref|ZP_05688897.1| prolyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|258444601|ref|ZP_05692930.1| prolyl-tRNA synthetase [Staphylococcus aureus A8115]
 gi|258447566|ref|ZP_05695710.1| prolyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|258449408|ref|ZP_05697511.1| prolyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|258454787|ref|ZP_05702751.1| prolyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|269202880|ref|YP_003282149.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98]
 gi|282892751|ref|ZP_06300986.1| prolyl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|295406200|ref|ZP_06816007.1| prolyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|296274821|ref|ZP_06857328.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MR1]
 gi|297208091|ref|ZP_06924522.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|297244428|ref|ZP_06928311.1| prolyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|300912172|ref|ZP_07129615.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
 gi|81175021|sp|Q99UK9|SYP_STAAM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|81175022|sp|Q7A5Y3|SYP_STAAN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|81175025|sp|Q7A120|SYP_STAAW RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|166980161|sp|A7X1P3|SYP_STAA1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|189083516|sp|A6U182|SYP_STAA2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|189083517|sp|A5ISE7|SYP_STAA9 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|13701063|dbj|BAB42358.1| proline-tRNA ligase [Staphylococcus aureus subsp. aureus N315]
 gi|14247033|dbj|BAB57425.1| proline-tRNA ligase [Staphylococcus aureus subsp. aureus Mu50]
 gi|21204314|dbj|BAB95011.1| proline-tRNA ligase [Staphylococcus aureus subsp. aureus MW2]
 gi|147740822|gb|ABQ49120.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|149946264|gb|ABR52200.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|156721719|dbj|BAF78136.1| proline-tRNA ligase [Staphylococcus aureus subsp. aureus Mu3]
 gi|253728553|gb|EES97282.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TCH130]
 gi|257789653|gb|EEV27993.1| prolyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|257839232|gb|EEV63708.1| prolyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|257842353|gb|EEV66778.1| prolyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|257849184|gb|EEV73166.1| prolyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|257850094|gb|EEV74047.1| prolyl-tRNA synthetase [Staphylococcus aureus A8115]
 gi|257853757|gb|EEV76716.1| prolyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|257857396|gb|EEV80294.1| prolyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|257863170|gb|EEV85934.1| prolyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|262075170|gb|ACY11143.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98]
 gi|282764748|gb|EFC04873.1| prolyl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|285816945|gb|ADC37432.1| Prolyl-tRNA synthetase [Staphylococcus aureus 04-02981]
 gi|294968788|gb|EFG44810.1| prolyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|296887334|gb|EFH26236.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|297178458|gb|EFH37704.1| prolyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|300886418|gb|EFK81620.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
 gi|312829657|emb|CBX34499.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ECT-R
           2]
 gi|315131057|gb|EFT87041.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS03]
 gi|329727670|gb|EGG64126.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus 21172]
          Length = 567

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 81/168 (48%), Gaps = 10/168 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E + HR L +      I +  SG+  +     ++   + + +R++++  D  EI  P 
Sbjct: 17  EAEAQSHRLLLKSG---LIKQSTSGIYSYLPLATRVLNNITAIVRQEMERIDSVEILMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW++SG W +Y   +  ++      +  R FAL P +     ++  + LKSY++L
Sbjct: 74  LQQAELWEESGRWGAYGPELMRLQD-----RHGRQFALGPTHEELVTSIVRNELKSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           P+ L +  S +R+E      GL+R R F   DA+ F   E   ++  +
Sbjct: 129 PMTLFQIQSKFRDEKRPRF-GLLRGREFIMKDAYSFHADEASLDQTYQ 175


>gi|302332869|gb|ADL23062.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           JKD6159]
          Length = 567

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 81/168 (48%), Gaps = 10/168 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E + HR L +      I +  SG+  +     ++   + + +R++++  D  EI  P 
Sbjct: 17  EAEAQSHRLLLKSG---LIKQSTSGIYSYLPLATRVLNNITAIVRQEMERIDSVEILMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW++SG W +Y   +  ++      +  R FAL P +     ++  + LKSY++L
Sbjct: 74  LQQAELWEESGRWGAYGPELMRLQD-----RHGRQFALGPTHEELVTSIVRNELKSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           P+ L +  S +R+E      GL+R R F   DA+ F   E   ++  +
Sbjct: 129 PMTLFQIQSKFRDEKRPRF-GLLRGREFIMKDAYSFHADEASLDQTYQ 175


>gi|329733665|gb|EGG69993.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus 21193]
          Length = 567

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 81/168 (48%), Gaps = 10/168 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E + HR L +      I +  SG+  +     ++   + + +R++++  D  EI  P 
Sbjct: 17  EAEAQSHRLLLKSG---LIKQSTSGIYSYLPLATRVLNNITAIVRQEMERIDSVEILMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW++SG W +Y   +  ++      +  R FAL P +     ++  + LKSY++L
Sbjct: 74  LQQAELWEESGRWGAYGPELMRLQD-----RHGRQFALGPTHEELVTSIVRNELKSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           P+ L +  S +R+E      GL+R R F   DA+ F   E   ++  +
Sbjct: 129 PMTLFQIQSKFRDEKRPRF-GLLRGREFIMKDAYSFHADEASLDQTYQ 175


>gi|312173361|emb|CBX81615.1| Prolyl-tRNA synthetase [Erwinia amylovora ATCC BAA-2158]
          Length = 572

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 46/176 (26%), Positives = 80/176 (45%), Gaps = 9/176 (5%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           TQYL    +    D   ++ ++ L    I +  SG+  W   G ++ + + + +R ++ +
Sbjct: 4   TQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREEMNN 63

Query: 290 DYE-EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
               EI+ P V    LWQ+SG W+ Y   +  +    D     R F L P +      + 
Sbjct: 64  AGAIEISMPVVQPADLWQESGRWEQYGPELLRLVDRSD-----RPFVLGPTHEEVITDLI 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
            + L SY++LP+ L +  + +R+E      G+MR R F   DA+ F T +    E 
Sbjct: 119 RNELSSYKQLPLNLFQIQTKFRDEVRPRF-GVMRSREFIMKDAYSFHTSQGSLQET 173


>gi|293374695|ref|ZP_06621003.1| proline--tRNA ligase [Turicibacter sanguinis PC909]
 gi|325840610|ref|ZP_08167091.1| proline--tRNA ligase [Turicibacter sp. HGF1]
 gi|292646609|gb|EFF64611.1| proline--tRNA ligase [Turicibacter sanguinis PC909]
 gi|325490259|gb|EGC92592.1| proline--tRNA ligase [Turicibacter sp. HGF1]
          Length = 420

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 89/400 (22%), Positives = 164/400 (41%), Gaps = 63/400 (15%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E R H+ L R   +  +A   +GV  +     ++   +   +R ++      E+  P 
Sbjct: 17  DAEIRSHQFLLRAGFIKQVA---AGVYTYLPLAKRVLNNVEGIVRDELDAIGGNELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +  + LW +SG WD Y + +  +     T ++ R FAL P +      V    L SY++L
Sbjct: 74  LQPKELWDESGRWDVYGSELMRL-----TDRNNREFALGPTHEEVITHVVRDFLNSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQM---FNECLKIHNLIISI 414
           P+ + +  + +R+E      GLMR R F   DA+ F  T+E +   +N  +K +    +I
Sbjct: 129 PLTVYQIQTKFRDEARPRF-GLMRGREFIMKDAYSFHATQESLDEAYNNFVKAYT---NI 184

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSD------ALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
           +   G    MV+  +    ++G        AL +  E       DTI  S+       + 
Sbjct: 185 FTRCGLNFRMVEADS---GQIGGSQSAEFMALAEVGE-------DTIVYSTTGSFAANIE 234

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVD--FNLPSRF----NAFYVNSHSEK----- 517
           + +     P       D +G       I+V   F L +++    NA +++ + +K     
Sbjct: 235 VADLEVGAPS-----PDGVGVVAHAKGIEVGHVFKLGTKYSEPMNAVFLDENQKKQPIIM 289

Query: 518 -CHPVMIHRAVFGSIERFIGIMIENFKGNLPLW---LSPIQAIVTTI---TSSAVEYAQE 570
            C+ + + R +   IE       +N   N  +W   ++P    V  +    +  +E A+ 
Sbjct: 290 GCYGIGVSRVMMAVIE-------QNNDENGMIWPKGIAPFDIHVVPVDVKKADQLEAAEN 342

Query: 571 IANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           I   LK+    +  D R E    K  +  +  +PI I  G
Sbjct: 343 IYAELKAAGFEVLLDDRKERAGVKFSDADLIGLPIRITVG 382


>gi|310764925|gb|ADP09875.1| prolyl-tRNA synthetase [Erwinia sp. Ejp617]
          Length = 572

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 46/176 (26%), Positives = 80/176 (45%), Gaps = 9/176 (5%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           TQYL    +    D   ++ ++ L    I +  SG+  W   G ++ + + + +R ++ +
Sbjct: 4   TQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREEMNN 63

Query: 290 DYE-EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
               EI+ P V    LWQ+SG W+ Y   +  +    D     R F L P +      + 
Sbjct: 64  AGAIEISMPVVQPADLWQESGRWEQYGPELLRLVDRSD-----RPFVLGPTHEEVITDLI 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
            + L SY++LP+ L +  + +R+E      G+MR R F   DA+ F T +    E 
Sbjct: 119 RNELSSYKQLPLNLFQIQTKFRDEVRPRF-GVMRSREFIMKDAYSFHTSQGSLQET 173


>gi|282903818|ref|ZP_06311706.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|282595436|gb|EFC00400.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
          Length = 567

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 81/168 (48%), Gaps = 10/168 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E + HR L +      I +  SG+  +     ++   + + +R++++  D  EI  P 
Sbjct: 17  EAEAQSHRLLLKAG---LIKQSTSGIYSYLPLATRVLNNITAIVRQEMERIDSVEILMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW++SG W +Y   +  ++      +  R FAL P +     ++  + LKSY++L
Sbjct: 74  LQQAELWEESGRWGAYGPELMRLQD-----RHGRQFALGPTHEELVTSIVRNELKSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           P+ L +  S +R+E      GL+R R F   DA+ F   E   ++  +
Sbjct: 129 PMTLFQIQSKFRDEKRPRF-GLLRGREFIMKDAYSFHADEASLDQTYQ 175


>gi|269940754|emb|CBI49136.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TW20]
          Length = 567

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 81/168 (48%), Gaps = 10/168 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E + HR L +      I +  SG+  +     ++   + + +R++++  D  EI  P 
Sbjct: 17  EAEAQSHRLLLKSG---LIKQSTSGIYSYLPLATRVLNNITAIVRQEMERIDSVEILMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW++SG W +Y   +  ++      +  R FAL P +     ++  + LKSY++L
Sbjct: 74  LQQAELWEESGRWGAYGPELMRLQD-----RHGRQFALGPTHEELVTSIVRNELKSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           P+ L +  S +R+E      GL+R R F   DA+ F   E   ++  +
Sbjct: 129 PMTLFQIQSKFRDEKRPRF-GLLRGREFIMKDAYSFHADEASLDQTYQ 175


>gi|240947869|ref|ZP_04752309.1| prolyl-tRNA synthetase [Actinobacillus minor NM305]
 gi|240297831|gb|EER48267.1| prolyl-tRNA synthetase [Actinobacillus minor NM305]
          Length = 571

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 91/202 (45%), Gaps = 10/202 (4%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-K 288
           +QYL+   +    D + ++ ++ L    I    SG+  W   G K+ + + + +R ++ K
Sbjct: 4   SQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMASGLYNWLPTGIKVLKKVENIVREEMNK 63

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
               E+  P V    LWQ+SG W+ Y A +       +     R F L P +      + 
Sbjct: 64  GGAIEVLMPVVQPAELWQESGRWNDYGAELLRFNDRGN-----RDFVLGPTHEEVITDLV 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI- 407
              + SY++LP+ L +  + +R+E      G+MR R F   DA+ F T ++   E   + 
Sbjct: 119 RREVSSYKQLPLNLYQIQTKFRDEVRPRF-GVMRSREFIMKDAYSFHTTQESLQETYDVM 177

Query: 408 HNLIISIYKDFGFEKIMVKLST 429
           + +  +I+   G +   V+  T
Sbjct: 178 YQVYSNIFTRLGLDFRAVQADT 199


>gi|259907567|ref|YP_002647923.1| prolyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
 gi|224963189|emb|CAX54673.1| Prolyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
 gi|283477409|emb|CAY73325.1| proS [Erwinia pyrifoliae DSM 12163]
          Length = 572

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 46/176 (26%), Positives = 80/176 (45%), Gaps = 9/176 (5%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           TQYL    +    D   ++ ++ L    I +  SG+  W   G ++ + + + +R ++ +
Sbjct: 4   TQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREEMNN 63

Query: 290 DYE-EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
               EI+ P V    LWQ+SG W+ Y   +  +    D     R F L P +      + 
Sbjct: 64  AGAIEISMPVVQPADLWQESGRWEQYGPELLRLVDRSD-----RPFVLGPTHEEVITDLI 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
            + L SY++LP+ L +  + +R+E      G+MR R F   DA+ F T +    E 
Sbjct: 119 RNELSSYKQLPLNLFQIQTKFRDEVRPRF-GVMRSREFIMKDAYSFHTSQGSLQET 173


>gi|282916523|ref|ZP_06324281.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139]
 gi|283770327|ref|ZP_06343219.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
 gi|282319010|gb|EFB49362.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139]
 gi|283460474|gb|EFC07564.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
          Length = 567

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 81/168 (48%), Gaps = 10/168 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E + HR L +      I +  SG+  +     ++   + + +R++++  D  EI  P 
Sbjct: 17  EAEAQSHRLLLKSG---LIKQSTSGIYSYLPLATRVLNNITAIVRQEMERIDSVEILMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW++SG W +Y   +  ++      +  R FAL P +     ++  + LKSY++L
Sbjct: 74  LQQAELWEESGRWGAYGPELMRLQD-----RHGRQFALGPTHEELVTSIVRNELKSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           P+ L +  S +R+E      GL+R R F   DA+ F   E   ++  +
Sbjct: 129 PMTLFQIQSKFRDEKRPRF-GLLRGREFIMKDAYSFHADEASLDQTYQ 175


>gi|120554655|ref|YP_959006.1| prolyl-tRNA synthetase [Marinobacter aquaeolei VT8]
 gi|152112927|sp|A1U1F0|SYP_MARAV RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|120324504|gb|ABM18819.1| prolyl-tRNA synthetase [Marinobacter aquaeolei VT8]
          Length = 577

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 40/161 (24%), Positives = 71/161 (44%), Gaps = 8/161 (4%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           +G+  W   G +  + +   +R ++ K   +E+  P V    LWQ+SG W+ Y   +  +
Sbjct: 37  AGLYTWLPLGLRTLRKVERIVREEMDKSGAQEVLMPAVQPAELWQESGRWEQYGGELLRL 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
                  +  R F   P +      +  + LKSY+ELP    +  + +R+E      G+M
Sbjct: 97  ND-----RHGRDFCFGPTHEEVITDLIRNELKSYKELPANFYQIQTKFRDERRPRF-GVM 150

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLKI-HNLIISIYKDFGFE 421
           R R F   DA+ F    +  +E  K+ H    +I+   G +
Sbjct: 151 RAREFIMKDAYSFHLNAESLDETYKVMHQTYCNIFDRLGLD 191


>gi|28378679|ref|NP_785571.1| prolyl-tRNA synthetase [Lactobacillus plantarum WCFS1]
 gi|254556877|ref|YP_003063294.1| prolyl-tRNA synthetase [Lactobacillus plantarum JDM1]
 gi|300768192|ref|ZP_07078097.1| proline--tRNA ligase [Lactobacillus plantarum subsp. plantarum ATCC
           14917]
 gi|308180820|ref|YP_003924948.1| prolyl-tRNA synthetase [Lactobacillus plantarum subsp. plantarum
           ST-III]
 gi|81840975|sp|Q88VK1|SYP_LACPL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|28271515|emb|CAD64420.1| proline--tRNA ligase [Lactobacillus plantarum WCFS1]
 gi|254045804|gb|ACT62597.1| prolyl-tRNA synthetase [Lactobacillus plantarum JDM1]
 gi|300494256|gb|EFK29419.1| proline--tRNA ligase [Lactobacillus plantarum subsp. plantarum ATCC
           14917]
 gi|308046311|gb|ADN98854.1| prolyl-tRNA synthetase [Lactobacillus plantarum subsp. plantarum
           ST-III]
          Length = 569

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 80/165 (48%), Gaps = 9/165 (5%)

Query: 245 DHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLD 301
           D   L+ +M L   +I +  +G+  +    +++   +   +R+++ K D  E+  P V+ 
Sbjct: 17  DAEALSHQMMLRAGYIRQISAGMYAYLPLAYRVLTNIEKIIRQEMEKIDAAEMLVPAVIP 76

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             LW+ +G +++Y   +F +K   D     R F L P +     ++    +KSY+ LP+ 
Sbjct: 77  AELWKATGRYETYGPELFKLKNRHD-----REFILGPTHEETFTSIVRDEIKSYKRLPLT 131

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           L +  + YR+E     +GL+R R F   DA+ F   E   ++  +
Sbjct: 132 LYQIQAKYRDEDR-PRYGLLRGREFIMKDAYSFHADEASLDDTFQ 175


>gi|258452562|ref|ZP_05700568.1| prolyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|257859780|gb|EEV82622.1| prolyl-tRNA synthetase [Staphylococcus aureus A5948]
          Length = 567

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 81/168 (48%), Gaps = 10/168 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E + HR L +      I +  SG+  +     ++   + + +R++++  D  EI  P 
Sbjct: 17  EAEAQSHRLLLKSG---LIKQSTSGIYSYLPLATRVLNNITAIVRQEMERIDSVEILMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW++SG W +Y   +  ++      +  R FAL P +     ++  + LKSY++L
Sbjct: 74  LQQAELWEESGRWGAYGPELMRLQD-----RHGRQFALGPTHEELVTSIVRNELKSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           P+ L +  S +R+E      GL+R R F   DA+ F   E   ++  +
Sbjct: 129 PMTLFQIQSKFRDEKRPRF-GLLRGREFIMKDAYSFHADEASLDQTYQ 175


>gi|302876555|ref|YP_003845188.1| prolyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|307687227|ref|ZP_07629673.1| prolyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|302579412|gb|ADL53424.1| prolyl-tRNA synthetase [Clostridium cellulovorans 743B]
          Length = 566

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 86/183 (46%), Gaps = 15/183 (8%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+E   H+ + R   +  +A   SGV  +   G K  + +   +R ++ K   +E     
Sbjct: 17  EAEISSHQLMLRAGLMRKMA---SGVYNYMPMGLKALKKVEDIIRDEMDKAGAQEFLASA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++   LW++SG WD+    MF +K  +D     R F L P +      +  + +KSY++L
Sbjct: 74  LIPAELWKESGRWDTMGPEMFRLKDRND-----RDFCLGPTHEEVFTDIARNEIKSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI-HNLIISIYKD 417
           P+ L +  + YR+E      G+MR R F   DA+ F       +E L I +N +   YK+
Sbjct: 129 PITLYQIQTKYRDERRPRF-GVMRSREFVMKDAYSFDKD----SEGLDISYNAMYEAYKN 183

Query: 418 FGF 420
             F
Sbjct: 184 IFF 186


>gi|90020556|ref|YP_526383.1| Pectate lyase/Amb allergen [Saccharophagus degradans 2-40]
 gi|114152247|sp|Q21MA8|SYP_SACD2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|89950156|gb|ABD80171.1| prolyl-tRNA synthetase [Saccharophagus degradans 2-40]
          Length = 575

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 40/162 (24%), Positives = 71/162 (43%), Gaps = 8/162 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +   +E+  P V    LW++SG W  Y   +  
Sbjct: 36  ASGLYNWLPAGLRVLRKVETIVREEMDRAGAQEVLMPVVQPAELWEESGRWQQYGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +    D     R F L P +      +  + LKSY++LP    +  + +R+E      G+
Sbjct: 96  INDRHD-----RAFCLGPTHEEVITDLIRNELKSYKQLPANFYQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKI-HNLIISIYKDFGFE 421
           MR R F   DA+ F   ++   E   I H     I+   G +
Sbjct: 150 MRAREFLMKDAYSFHASQECLQETYDIMHAAYCKIFDRIGLD 191


>gi|194014474|ref|ZP_03053091.1| prolyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
 gi|194013500|gb|EDW23065.1| prolyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
          Length = 565

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 94/193 (48%), Gaps = 16/193 (8%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E + H+ L R      I ++ SG+  +     K+ Q + S +R+++ K    E+  P 
Sbjct: 17  DAEAKSHQLLVRAG---FIRQNTSGIYHYLPLAHKVIQHIQSIVRKEMEKAGAAELLMPV 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    +WQ+SG W +Y   +  +K      +  R FAL P +     ++    +KSY++L
Sbjct: 74  LQQAEMWQESGRWYTYGPELMRMKD-----RHGREFALGPTHEEVITSLVRSEVKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+ L +  S +R+E      GL+R R F   DA+ F +  +  ++    +N + + Y + 
Sbjct: 129 PLTLYQIQSKFRDEQRPRF-GLLRGREFIMKDAYSFHSSPESLDDT---YNKMFTAYSNV 184

Query: 419 GFEKIMVKLSTRP 431
            F K  V L+ RP
Sbjct: 185 -FSK--VGLNFRP 194


>gi|49483426|ref|YP_040650.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|257425317|ref|ZP_05601742.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257427978|ref|ZP_05604376.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257430611|ref|ZP_05606993.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 68-397]
 gi|257433371|ref|ZP_05609729.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus E1410]
 gi|257436213|ref|ZP_05612260.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876]
 gi|282905581|ref|ZP_06313436.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282908556|ref|ZP_06316386.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282910835|ref|ZP_06318638.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282914040|ref|ZP_06321827.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282918962|ref|ZP_06326697.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427]
 gi|282924085|ref|ZP_06331761.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101]
 gi|283958006|ref|ZP_06375457.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|293501072|ref|ZP_06666923.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 58-424]
 gi|293510034|ref|ZP_06668742.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809]
 gi|293526620|ref|ZP_06671305.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|295427750|ref|ZP_06820382.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|297591292|ref|ZP_06949930.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|81175023|sp|Q6GHH2|SYP_STAAR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|49241555|emb|CAG40241.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|257271774|gb|EEV03912.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257274819|gb|EEV06306.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257278739|gb|EEV09358.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 68-397]
 gi|257281464|gb|EEV11601.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus E1410]
 gi|257284495|gb|EEV14615.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876]
 gi|282314057|gb|EFB44449.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101]
 gi|282316772|gb|EFB47146.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427]
 gi|282322108|gb|EFB52432.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282325440|gb|EFB55749.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282327618|gb|EFB57901.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282330873|gb|EFB60387.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|283790155|gb|EFC28972.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|290920692|gb|EFD97755.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|291096077|gb|EFE26338.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 58-424]
 gi|291466978|gb|EFF09496.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809]
 gi|295128108|gb|EFG57742.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|297576178|gb|EFH94894.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|312438357|gb|ADQ77428.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus TCH60]
 gi|315194151|gb|EFU24544.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS00]
          Length = 567

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 81/168 (48%), Gaps = 10/168 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E + HR L +      I +  SG+  +     ++   + + +R++++  D  EI  P 
Sbjct: 17  EAEAQSHRLLLKAG---LIKQSTSGIYSYLPLATRVLNNITAIVRQEMERIDSVEILMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW++SG W +Y   +  ++      +  R FAL P +     ++  + LKSY++L
Sbjct: 74  LQQAELWEESGRWGAYGPELMRLQD-----RHGRQFALGPTHEELVTSIVRNELKSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           P+ L +  S +R+E      GL+R R F   DA+ F   E   ++  +
Sbjct: 129 PMTLFQIQSKFRDEKRPRF-GLLRGREFIMKDAYSFHADEASLDQTYQ 175


>gi|329956635|ref|ZP_08297208.1| phosphoribulokinase/uridine kinase family protein [Bacteroides
           clarus YIT 12056]
 gi|328524007|gb|EGF51083.1| phosphoribulokinase/uridine kinase family protein [Bacteroides
           clarus YIT 12056]
          Length = 557

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 43/184 (23%), Positives = 84/184 (45%), Gaps = 2/184 (1%)

Query: 15  KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVI 73
           K FP+ ++  D+    + +     V+  +N +   L+  V     +E +   D   +   
Sbjct: 16  KEFPIGSSLLDIYYGFNLNFPYPVVSAKVNNRSEGLNFRVYNNKDVEFLDVRDSSGMRTY 75

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
             S   I+ +AV  ++PE ++ +   +  G++ +    +P   ++++ I+K+MQEIIA D
Sbjct: 76  VRSLCFILYKAVSELFPEGKLFVEHPVSKGYFCNLRIGRPIELEDVSAIKKRMQEIIAED 135

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQ 193
            PF +      +A  +F  +    KV++LE+         Y  G+  D   G  +  TG 
Sbjct: 136 IPFRRTECHTTEAVRVFSERGMNDKVKLLET-SGSLYTYYYTLGDTVDYYYGNLLPGTGF 194

Query: 194 VKKF 197
           +K F
Sbjct: 195 IKLF 198


>gi|237739058|ref|ZP_04569539.1| prolyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
 gi|229423658|gb|EEO38705.1| prolyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
          Length = 567

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 77/166 (46%), Gaps = 10/166 (6%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
           +E+E   H+ + R   +  +A   SG+  +   G++  + + + +R ++ +    E+  P
Sbjct: 16  KEAEIASHKLMLRAAMIKKLA---SGIYAYLPLGYRTIRKIENIIREEMDRAGALELLMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            V    LWQ+SG WD   A M  +K   +     R F L P       ++    + SY+ 
Sbjct: 73  VVQPAELWQESGRWDVMGAEMLRLKDRHE-----RDFVLSPTQEEMITSIVRSDISSYKS 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE 403
           LP+ L    + +R+E      GLMR R FT  D + F T ++  +E
Sbjct: 128 LPLNLYHIQTKFRDERRPRF-GLMRGREFTMKDGYSFHTSQESLDE 172


>gi|283470478|emb|CAQ49689.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ST398]
          Length = 567

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 81/168 (48%), Gaps = 10/168 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E + HR L +      I +  SG+  +     ++   + + +R++++  D  EI  P 
Sbjct: 17  EAEAQSHRLLLKAG---LIKQSTSGIYSYLPLATRVLNNITAIVRQEMERIDSVEILMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW++SG W +Y   +  ++      +  R FAL P +     ++  + LKSY++L
Sbjct: 74  LQQAELWEESGRWGAYGPELMRLQD-----RHGRQFALGPTHEELVTSIVRNELKSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           P+ L +  S +R+E      GL+R R F   DA+ F   E   ++  +
Sbjct: 129 PMTLFQIQSKFRDEKRPRF-GLLRGREFIMKDAYSFHADEASLDQTYQ 175


>gi|258423896|ref|ZP_05686781.1| prolyl-tRNA synthetase [Staphylococcus aureus A9635]
 gi|257845925|gb|EEV69954.1| prolyl-tRNA synthetase [Staphylococcus aureus A9635]
          Length = 567

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 81/168 (48%), Gaps = 10/168 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E + HR L +      I +  SG+  +     ++   + + +R++++  D  EI  P 
Sbjct: 17  EAEAQSHRLLLKAG---LIKQSTSGIYSYLPLATRVLNNITAIVRQEMERIDSVEILMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW++SG W +Y   +  ++      +  R FAL P +     ++  + LKSY++L
Sbjct: 74  LQQAELWEESGRWGAYGPELMRLQD-----RHGRQFALGPTHEELVTSIVRNELKSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           P+ L +  S +R+E      GL+R R F   DA+ F   E   ++  +
Sbjct: 129 PMTLFQIQSKFRDEKRPRF-GLLRGREFIMKDAYSFHADEASLDQTYQ 175


>gi|116872750|ref|YP_849531.1| prolyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|123463747|sp|A0AIC0|SYP_LISW6 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|116741628|emb|CAK20752.1| prolyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
          Length = 568

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 76/169 (44%), Gaps = 16/169 (9%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKI----KDDYEEINTPQVL-----DQHLWQQSGHWDS 313
           +G I     G   +  L + M RKI    +++ E I   ++L        LWQ+SG W+ 
Sbjct: 29  AGFIRQTASGIYSYLPLATLMLRKIEAIIREELEAIGAAELLLPALQPAELWQESGRWND 88

Query: 314 YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP 373
           Y   +  +K      +  R FAL P +     A+    +KSY+ LP+ L +  + +R+E 
Sbjct: 89  YGPELMRLKD-----RASRDFALGPTHEEVITALLRDEVKSYKRLPLTLYQIQTKFRDEK 143

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI-HNLIISIYKDFGFE 421
                GL+R R F   DA+ F    +  +E  K+ H    +I+   G E
Sbjct: 144 RPRF-GLLRGREFIMKDAYSFHATSESLDEVYKLMHQAYSNIFTRCGLE 191


>gi|257887080|ref|ZP_05666733.1| prolyl-tRNA synthetase [Enterococcus faecium 1,141,733]
 gi|257895645|ref|ZP_05675298.1| prolyl-tRNA synthetase [Enterococcus faecium Com12]
 gi|293377744|ref|ZP_06623933.1| proline--tRNA ligase [Enterococcus faecium PC4.1]
 gi|257823134|gb|EEV50066.1| prolyl-tRNA synthetase [Enterococcus faecium 1,141,733]
 gi|257832210|gb|EEV58631.1| prolyl-tRNA synthetase [Enterococcus faecium Com12]
 gi|292643744|gb|EFF61865.1| proline--tRNA ligase [Enterococcus faecium PC4.1]
          Length = 569

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 73/149 (48%), Gaps = 12/149 (8%)

Query: 279 LISYMRRKIKDDYEEINT-----PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           ++  ++R +++++E+I       P +L   LW++SG +++Y  N++  K  +D     R 
Sbjct: 49  VLEKLKRIMREEFEKIGAVEMLMPAILPAELWEESGRYETYGPNLYRFKDRND-----RK 103

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
             L P +      +  + + SY++LP+ L +    YR+E      GL+R R F   DA+ 
Sbjct: 104 MILGPTHEETFTDLMRNEINSYKKLPLNLYQIQPKYRDEKRPRF-GLLRGREFIMKDAYS 162

Query: 394 FCTKEQMFNECLKIH-NLIISIYKDFGFE 421
           F   E+  +E  K +      ++K  G E
Sbjct: 163 FHATEESLDETYKDYEKAYTEVFKRCGLE 191


>gi|256545377|ref|ZP_05472740.1| proline--tRNA ligase [Anaerococcus vaginalis ATCC 51170]
 gi|256398938|gb|EEU12552.1| proline--tRNA ligase [Anaerococcus vaginalis ATCC 51170]
          Length = 565

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 75/157 (47%), Gaps = 10/157 (6%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
           +++E + H+ L R      I +  SGV  +   G K+   + + +R+ + K D  E++T 
Sbjct: 9   QDAETQSHKLLVRGA---FIRKTSSGVYSYLPLGMKVINKIENIVRKSMEKYDSIEVSTS 65

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +  + +W++SG W ++   MF +K   D     R F L P        +    L SY++
Sbjct: 66  VLQSKDIWEKSGRWQNFGPEMFKIKDRHD-----REFCLGPTAEEQFTNLIKDELNSYKQ 120

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           LP+ L +  S +R+E      G+ R R F   DA+ F
Sbjct: 121 LPLNLYQIVSKFRDEKRPRF-GINRSRDFIMKDAYSF 156


>gi|293556646|ref|ZP_06675211.1| prolyl-tRNA synthetase [Enterococcus faecium E1039]
 gi|291601181|gb|EFF31468.1| prolyl-tRNA synthetase [Enterococcus faecium E1039]
          Length = 569

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 73/149 (48%), Gaps = 12/149 (8%)

Query: 279 LISYMRRKIKDDYEEINT-----PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           ++  ++R +++++E+I       P +L   LW++SG +++Y  N++  K  +D     R 
Sbjct: 49  VLEKLKRIMREEFEKIGAVEMLMPAILPAELWEESGRYETYGPNLYRFKDRND-----RK 103

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
             L P +      +  + + SY++LP+ L +    YR+E      GL+R R F   DA+ 
Sbjct: 104 MILGPTHEETFTDLMRNEINSYKKLPLNLYQIQPKYRDEKRPRF-GLLRGREFIMKDAYS 162

Query: 394 FCTKEQMFNECLKIH-NLIISIYKDFGFE 421
           F   E+  +E  K +      ++K  G E
Sbjct: 163 FHATEESLDETYKDYEKAYTEVFKRCGLE 191


>gi|253731882|ref|ZP_04866047.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253724292|gb|EES93021.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
          Length = 567

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 81/168 (48%), Gaps = 10/168 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E + HR L +      I +  SG+  +     ++   + + +R++++  D  EI  P 
Sbjct: 17  EAEAQSHRLLLKSG---LIKQSTSGIYSYLPLATRVLNNITAIVRQEMERIDSVEILMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW++SG W +Y   +  ++      +  R FAL P +     ++  + LKSY++L
Sbjct: 74  LQQAELWEESGRWGAYGPELMRLQD-----RHGRRFALGPTHEELVTSIVRNELKSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           P+ L +  S +R+E      GL+R R F   DA+ F   E   ++  +
Sbjct: 129 PMTLFQIQSKFRDEKRPRF-GLLRGREFIMKDAYSFHADEASLDQTYQ 175


>gi|227551759|ref|ZP_03981808.1| proline--tRNA ligase [Enterococcus faecium TX1330]
 gi|227179064|gb|EEI60036.1| proline--tRNA ligase [Enterococcus faecium TX1330]
          Length = 569

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 73/149 (48%), Gaps = 12/149 (8%)

Query: 279 LISYMRRKIKDDYEEINT-----PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           ++  ++R +++++E+I       P +L   LW++SG +++Y  N++  K  +D     R 
Sbjct: 49  VLEKLKRIMREEFEKIGAVEMLMPAILPAELWEESGRYETYGPNLYRFKDRND-----RK 103

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
             L P +      +  + + SY++LP+ L +    YR+E      GL+R R F   DA+ 
Sbjct: 104 MILGPTHEETFTDLMRNEINSYKKLPLNLYQIQPKYRDEKRPRF-GLLRGREFIMKDAYS 162

Query: 394 FCTKEQMFNECLKIH-NLIISIYKDFGFE 421
           F   E+  +E  K +      ++K  G E
Sbjct: 163 FHATEESLDETYKDYEKAYTEVFKRCGLE 191


>gi|237704354|ref|ZP_04534835.1| prolyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
 gi|26106541|gb|AAN78727.1|AE016755_227 Prolyl-tRNA synthetase [Escherichia coli CFT073]
 gi|91070839|gb|ABE05720.1| prolyl-tRNA synthetase [Escherichia coli UTI89]
 gi|226902266|gb|EEH88525.1| prolyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
          Length = 590

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 10/192 (5%)

Query: 217 LSRIYGTAWN-TQQELTQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGW 273
           L  +  + WN      +QYL    +    D   ++ ++ L    I +  SG+  W   G 
Sbjct: 6   LEPVLPSNWNRNNMRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGV 65

Query: 274 KIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           ++ + + + +R ++ +    E+  P V    LWQ+SG W+ Y   +  +    D     R
Sbjct: 66  RVLKKVENIVREEMNNAGAIEVLMPVVQPSELWQESGRWEQYGPELLRIADRGD-----R 120

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
            F L P +      +  + L SY++LP+   +  + +R+E      G+MR R F   DA+
Sbjct: 121 PFVLGPTHEEVITDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRF-GVMRSREFLMKDAY 179

Query: 393 VFCTKEQMFNEC 404
            F T ++   E 
Sbjct: 180 SFHTSQESLQET 191


>gi|257898235|ref|ZP_05677888.1| prolyl-tRNA synthetase [Enterococcus faecium Com15]
 gi|293570616|ref|ZP_06681667.1| prolyl-tRNA synthetase [Enterococcus faecium E980]
 gi|257836147|gb|EEV61221.1| prolyl-tRNA synthetase [Enterococcus faecium Com15]
 gi|291609287|gb|EFF38558.1| prolyl-tRNA synthetase [Enterococcus faecium E980]
          Length = 569

 Score = 61.2 bits (147), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 73/149 (48%), Gaps = 12/149 (8%)

Query: 279 LISYMRRKIKDDYEEINT-----PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           ++  ++R +++++E+I       P +L   LW++SG +++Y  N++  K  +D     R 
Sbjct: 49  VLEKLKRIMREEFEKIGAVEMLMPAILPAELWEESGRYETYGPNLYRFKDRND-----RK 103

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
             L P +      +  + + SY++LP+ L +    YR+E      GL+R R F   DA+ 
Sbjct: 104 MILGPTHEETFTDLMRNEINSYKKLPLNLYQIQPKYRDEKRPRF-GLLRGREFIMKDAYS 162

Query: 394 FCTKEQMFNECLKIH-NLIISIYKDFGFE 421
           F   E+  +E  K +      ++K  G E
Sbjct: 163 FHATEESLDETYKDYEKAYTEVFKRCGLE 191


>gi|157692336|ref|YP_001486798.1| prolyl-tRNA synthetase [Bacillus pumilus SAFR-032]
 gi|166980100|sp|A8FDC1|SYP_BACP2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|157681094|gb|ABV62238.1| proline--tRNA ligase [Bacillus pumilus SAFR-032]
          Length = 565

 Score = 61.2 bits (147), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 94/193 (48%), Gaps = 16/193 (8%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E + H+ L R      I ++ SG+  +     K+ Q + S +R+++ K    E+  P 
Sbjct: 17  DAEAKSHQLLVRAG---FIRQNTSGIYHYLPLAHKVIQHIQSIVRKEMEKAGAAELLMPV 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    +WQ+SG W +Y   +  +K      +  R FAL P +     ++    +KSY++L
Sbjct: 74  LQQAEMWQESGRWYTYGPELMRMKD-----RHGREFALGPTHEEVITSLVRSEVKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+ L +  S +R+E      GL+R R F   DA+ F +  +  ++    +N + + Y + 
Sbjct: 129 PLTLYQIQSKFRDEQRPRF-GLLRGREFIMKDAYSFHSSPESLDDT---YNKMFTAYSNV 184

Query: 419 GFEKIMVKLSTRP 431
            F K  V L+ RP
Sbjct: 185 -FSK--VGLNFRP 194


>gi|260495035|ref|ZP_05815164.1| prolyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
 gi|260197478|gb|EEW94996.1| prolyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
          Length = 567

 Score = 61.2 bits (147), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 84/185 (45%), Gaps = 11/185 (5%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
           +E+E   H+ + R   +  +A   SG+  +   G++  + + + +R ++ +    E+  P
Sbjct: 16  KEAEIASHKLMLRAGMIKKLA---SGIYAYLPLGYRTIRKIENIVREEMDRAGALELLMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            V    LWQ+SG WD     M  +K   +     R F L P       A+    + SY+ 
Sbjct: 73  VVQPAELWQESGRWDVMGPEMLRLKDRHE-----RGFVLSPTQEEMITAIVRSDISSYKS 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT-KEQMFNECLKIHNLIISIYK 416
           LP+ L    + +R+E      GLMR R FT  DA+ F T +E +  E L + +    I+ 
Sbjct: 128 LPINLYHIQTKFRDERRPRF-GLMRGREFTMKDAYSFHTSQESLDKEFLNMRDAYTRIFT 186

Query: 417 DFGFE 421
             G +
Sbjct: 187 RCGLK 191


>gi|326201774|ref|ZP_08191645.1| AAA ATPase [Clostridium papyrosolvens DSM 2782]
 gi|325988374|gb|EGD49199.1| AAA ATPase [Clostridium papyrosolvens DSM 2782]
          Length = 552

 Score = 61.2 bits (147), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 71/144 (49%), Gaps = 1/144 (0%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPEDPRSLAVIRHSCAH 79
            T  +++E   +      VA  +N  + +LS  ++E   I  I   D   + + R S   
Sbjct: 21  TTLLELSERFKKEYLSTIVAARVNNDIKELSFRIKEDAEIGFIDLTDEDGMRIYRRSLYF 80

Query: 80  IMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQ 139
           I   AV  ++P+ +  I   + +G Y + + E   + D++  ++K+M+EI++   PF K+
Sbjct: 81  IFIMAVHDVFPDRKAVITHPMSNGVYCEINGEDELTEDDIELVDKRMREIVSMKIPFEKK 140

Query: 140 YLSHEKARELFESKKEAYKVEILE 163
            +S E AR  ++   +  K E+LE
Sbjct: 141 EISTESARRQYKDSGKLDKYEVLE 164


>gi|257878529|ref|ZP_05658182.1| prolyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257882947|ref|ZP_05662600.1| prolyl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|257894712|ref|ZP_05674365.1| prolyl-tRNA synthetase [Enterococcus faecium 1,231,408]
 gi|293567720|ref|ZP_06679062.1| prolyl-tRNA synthetase [Enterococcus faecium E1071]
 gi|294618726|ref|ZP_06698258.1| prolyl-tRNA synthetase [Enterococcus faecium E1679]
 gi|294620760|ref|ZP_06699967.1| prolyl-tRNA synthetase [Enterococcus faecium U0317]
 gi|257812757|gb|EEV41515.1| prolyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257818605|gb|EEV45933.1| prolyl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|257831091|gb|EEV57698.1| prolyl-tRNA synthetase [Enterococcus faecium 1,231,408]
 gi|291589563|gb|EFF21369.1| prolyl-tRNA synthetase [Enterococcus faecium E1071]
 gi|291595039|gb|EFF26384.1| prolyl-tRNA synthetase [Enterococcus faecium E1679]
 gi|291599740|gb|EFF30750.1| prolyl-tRNA synthetase [Enterococcus faecium U0317]
          Length = 569

 Score = 61.2 bits (147), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 73/149 (48%), Gaps = 12/149 (8%)

Query: 279 LISYMRRKIKDDYEEINT-----PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           ++  ++R +++++E+I       P +L   LW++SG +++Y  N++  K  +D     R 
Sbjct: 49  VLEKLKRIMREEFEKIGAVEMLMPAILPAELWEESGRYETYGPNLYRFKDRND-----RK 103

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
             L P +      +  + + SY++LP+ L +    YR+E      GL+R R F   DA+ 
Sbjct: 104 MILGPTHEETFTDLMRNEINSYKKLPLNLYQIQPKYRDEKRPRF-GLLRGREFIMKDAYS 162

Query: 394 FCTKEQMFNECLKIH-NLIISIYKDFGFE 421
           F   E+  +E  K +      ++K  G E
Sbjct: 163 FHATEESLDETYKDYEKAYTEVFKRCGLE 191


>gi|29376876|ref|NP_816030.1| prolyl-tRNA synthetase [Enterococcus faecalis V583]
 gi|227519897|ref|ZP_03949946.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0104]
 gi|81838863|sp|Q831W7|SYP_ENTFA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|118138617|pdb|2J3L|A Chain A, Prolyl-Trna Synthetase From Enterococcus Faecalis
           Complexed With A Prolyl-Adenylate Analogue
           ('5'-O-(N-(L-Prolyl)- Sulfamoyl)adenosine)
 gi|118138618|pdb|2J3L|B Chain B, Prolyl-Trna Synthetase From Enterococcus Faecalis
           Complexed With A Prolyl-Adenylate Analogue
           ('5'-O-(N-(L-Prolyl)- Sulfamoyl)adenosine)
 gi|118138619|pdb|2J3M|A Chain A, Prolyl-Trna Synthetase From Enterococcus Faecalis
           Complexed With Atp, Manganese And Prolinol
 gi|118138620|pdb|2J3M|B Chain B, Prolyl-Trna Synthetase From Enterococcus Faecalis
           Complexed With Atp, Manganese And Prolinol
 gi|29344341|gb|AAO82100.1| prolyl-tRNA synthetase [Enterococcus faecalis V583]
 gi|227072691|gb|EEI10654.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0104]
          Length = 572

 Score = 61.2 bits (147), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 42/167 (25%), Positives = 80/167 (47%), Gaps = 8/167 (4%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYR 315
           +I +  +G+  +     ++ + L + MR +  K D  E+  P +L   LW++SG +++Y 
Sbjct: 31  YIRQVAAGIYSYLPLANRVLEKLKTIMREEFEKIDAVEMLMPALLPAELWKESGRYETYG 90

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            N++ +K  +D     R + L P +      +    + SY+ LP+ L +  + YR+E   
Sbjct: 91  PNLYRLKDRND-----RDYILGPTHEETFTELIRDEINSYKRLPLNLYQIQTKYRDEKR- 144

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS-IYKDFGFE 421
           S  GL+R R F   D + F   E   ++  + +    S I++  G E
Sbjct: 145 SRSGLLRGREFIMKDGYSFHADEASLDQSYRDYEKAYSRIFERCGLE 191


>gi|281421522|ref|ZP_06252521.1| phosphoribulokinase family protein [Prevotella copri DSM 18205]
 gi|281404594|gb|EFB35274.1| phosphoribulokinase family protein [Prevotella copri DSM 18205]
          Length = 553

 Score = 61.2 bits (147), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 82/180 (45%), Gaps = 2/180 (1%)

Query: 19  VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIRHSC 77
           + +T  D+  +    +    V+  +N KV  +   V     +E +             + 
Sbjct: 20  IGSTLFDIFSAFDLKMTHGPVSARVNNKVEGMHYRVYNSKDVEFLDMTSSSGSRTYTRTL 79

Query: 78  AHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFL 137
             ++ +AVQ I+P   V I   + +GFY D    +P   +++  I ++MQEII    P  
Sbjct: 80  FFVLCKAVQDIYPATDVVIDIPVSNGFYVDIRLGRPVVDEDVNIIRRRMQEIIDARMPIR 139

Query: 138 KQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
           +  +  E+A  LF+ K +  KV++L++  A    T Y+ G++ D   G  + +T Q+  F
Sbjct: 140 RFTVPTEEAVALFQEKGDVEKVKLLKTSGAIY-TTYYKIGDYVDYYYGTLLTNTSQLYLF 198


>gi|257884339|ref|ZP_05663992.1| prolyl-tRNA synthetase [Enterococcus faecium 1,231,501]
 gi|261207398|ref|ZP_05922084.1| prolyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289566680|ref|ZP_06447097.1| prolyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|294613940|ref|ZP_06693875.1| prolyl-tRNA synthetase [Enterococcus faecium E1636]
 gi|257820177|gb|EEV47325.1| prolyl-tRNA synthetase [Enterococcus faecium 1,231,501]
 gi|260078289|gb|EEW65994.1| prolyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289161539|gb|EFD09422.1| prolyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|291593215|gb|EFF24789.1| prolyl-tRNA synthetase [Enterococcus faecium E1636]
          Length = 569

 Score = 61.2 bits (147), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 73/149 (48%), Gaps = 12/149 (8%)

Query: 279 LISYMRRKIKDDYEEINT-----PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           ++  ++R +++++E+I       P +L   LW++SG +++Y  N++  K  +D     R 
Sbjct: 49  VLEKLKRIMREEFEKIGAVEMLMPAILPAELWEESGRYETYGPNLYRFKDRND-----RK 103

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
             L P +      +  + + SY++LP+ L +    YR+E      GL+R R F   DA+ 
Sbjct: 104 MILGPTHEETFTDLMRNEINSYKKLPLNLYQIQPKYRDEKRPRF-GLLRGREFIMKDAYS 162

Query: 394 FCTKEQMFNECLKIH-NLIISIYKDFGFE 421
           F   E+  +E  K +      ++K  G E
Sbjct: 163 FHATEESLDETYKDYEKAYTEVFKRCGLE 191


>gi|69246859|ref|ZP_00604151.1| Prolyl-tRNA synthetase, bacterial [Enterococcus faecium DO]
 gi|257889274|ref|ZP_05668927.1| prolyl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|258615945|ref|ZP_05713715.1| prolyl-tRNA synthetase [Enterococcus faecium DO]
 gi|260560114|ref|ZP_05832292.1| prolyl-tRNA synthetase [Enterococcus faecium C68]
 gi|293560203|ref|ZP_06676705.1| prolyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|314937502|ref|ZP_07844835.1| prolyl-tRNA synthetase [Enterococcus faecium TX0133a04]
 gi|314942161|ref|ZP_07849015.1| prolyl-tRNA synthetase [Enterococcus faecium TX0133C]
 gi|314947499|ref|ZP_07850914.1| prolyl-tRNA synthetase [Enterococcus faecium TX0082]
 gi|314951486|ref|ZP_07854535.1| prolyl-tRNA synthetase [Enterococcus faecium TX0133A]
 gi|314992576|ref|ZP_07857994.1| prolyl-tRNA synthetase [Enterococcus faecium TX0133B]
 gi|314995489|ref|ZP_07860589.1| prolyl-tRNA synthetase [Enterococcus faecium TX0133a01]
 gi|68195040|gb|EAN09503.1| Prolyl-tRNA synthetase, bacterial [Enterococcus faecium DO]
 gi|257825634|gb|EEV52260.1| prolyl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|260073949|gb|EEW62273.1| prolyl-tRNA synthetase [Enterococcus faecium C68]
 gi|291605875|gb|EFF35307.1| prolyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|313590323|gb|EFR69168.1| prolyl-tRNA synthetase [Enterococcus faecium TX0133a01]
 gi|313592868|gb|EFR71713.1| prolyl-tRNA synthetase [Enterococcus faecium TX0133B]
 gi|313596326|gb|EFR75171.1| prolyl-tRNA synthetase [Enterococcus faecium TX0133A]
 gi|313599084|gb|EFR77929.1| prolyl-tRNA synthetase [Enterococcus faecium TX0133C]
 gi|313643143|gb|EFS07723.1| prolyl-tRNA synthetase [Enterococcus faecium TX0133a04]
 gi|313646049|gb|EFS10629.1| prolyl-tRNA synthetase [Enterococcus faecium TX0082]
          Length = 569

 Score = 61.2 bits (147), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 73/149 (48%), Gaps = 12/149 (8%)

Query: 279 LISYMRRKIKDDYEEINT-----PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           ++  ++R +++++E+I       P +L   LW++SG +++Y  N++  K  +D     R 
Sbjct: 49  VLEKLKRIMREEFEKIGAVEMLMPAILPAELWEESGRYETYGPNLYRFKDRND-----RK 103

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
             L P +      +  + + SY++LP+ L +    YR+E      GL+R R F   DA+ 
Sbjct: 104 MILGPTHEETFTDLMRNEINSYKKLPLNLYQIQPKYRDEKRPRF-GLLRGREFIMKDAYS 162

Query: 394 FCTKEQMFNECLKIH-NLIISIYKDFGFE 421
           F   E+  +E  K +      ++K  G E
Sbjct: 163 FHATEESLDETYKDYEKAYTEVFKRCGLE 191


>gi|329925255|ref|ZP_08280198.1| proline--tRNA ligase [Paenibacillus sp. HGF5]
 gi|328940088|gb|EGG36421.1| proline--tRNA ligase [Paenibacillus sp. HGF5]
          Length = 575

 Score = 61.2 bits (147), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 69/139 (49%), Gaps = 7/139 (5%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
           +I +  +G+  +   GW++ + + + +R+++     +E+  P V    LW++SG +D Y 
Sbjct: 31  YIRQTAAGIYSYLPLGWRVLRKIEAIIRQEMDSAGGQELLMPAVQPAELWKESGRYDVYG 90

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
           A +  +    D     R F L P +     ++    + SYR+LPV L +  S YR+E   
Sbjct: 91  AELIRLHDRHD-----REFVLGPTHEEVITSIVRQEISSYRKLPVNLYQIQSKYRDERRP 145

Query: 376 SLHGLMRVRGFTQDDAHVF 394
              GL+R R F   DA+ F
Sbjct: 146 RF-GLLRGREFLMKDAYSF 163


>gi|57640485|ref|YP_182963.1| prolyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
 gi|74503571|sp|Q5JF49|SYP_PYRKO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|57158809|dbj|BAD84739.1| prolyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
          Length = 481

 Score = 61.2 bits (147), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 84/388 (21%), Positives = 161/388 (41%), Gaps = 66/388 (17%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSG-HWDSYRANMFAV 321
           G+  W   G KI + +  ++  ++ +  ++E+  P ++ +  +Q+   H   +   ++ V
Sbjct: 34  GMNVWLPYGLKIMRNIERFIHAEMERTGHDEVLFPALIPETEFQKEAEHIKGFEGEVYWV 93

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
             A     D+R   L+P +     ++F+  ++S+ +LP ++ +  +VYR E +     L+
Sbjct: 94  THAGLEPLDVR-LILRPTSETAMYSMFSLWIRSHADLPFKIYQIVNVYRYE-TKHTRPLI 151

Query: 382 RVRG----FTQDDAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
           RVR     F    AH  +   E+   E L+I + +        F  +   +S RPE    
Sbjct: 152 RVREISRFFEAHTAHDSYEDAERQIKEDLEIFDNLAR------FLALPYIISKRPE---- 201

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
               WD                             GA+Y    E ++ D  GR  Q GT+
Sbjct: 202 ----WDKFP--------------------------GAYYSLGAEVMMPD--GRTLQIGTM 229

Query: 497 QVDFNLPSRF-NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLS 551
               N    F  A+ +   +E      +H+  FG  ER +  +I    ++    LP  ++
Sbjct: 230 H---NYRQNFAKAYNIQYETETGDHEYVHQTTFGMSERLLAAVIAIHGDDRGMVLPPTIA 286

Query: 552 PIQAIVTTITSSAVE-----YAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPII 606
           PIQ ++  I     E     YA+EIA  L++  + +  D R+     K  +  +K +P+ 
Sbjct: 287 PIQVVIVPIPKKDSEADVFAYAREIAEELRTAGIRVHVDERDIRPGRKYYDWELKGVPLR 346

Query: 607 IICGDKEASERSIGIRRFGSTTTQKVSL 634
           I  G ++   +   + R    T +K+++
Sbjct: 347 IEVGPRDVEGKKAVLAR--RDTLEKITV 372


>gi|317969639|ref|ZP_07971029.1| prolyl-tRNA synthetase [Synechococcus sp. CB0205]
          Length = 633

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 52/179 (29%), Positives = 82/179 (45%), Gaps = 12/179 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQ 298
           E+E   H+ L R     +I   GSG+  +    W++ Q + + +R ++      E   PQ
Sbjct: 42  EAEIASHKLLLRA---GYIRRIGSGIYAYLPLLWRVLQKVSAVVREELNAAGALETLLPQ 98

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W  Y      +   +D  +  R   L P +     A+    L+SYR+L
Sbjct: 99  LQPSELWQRSGRWAGYTDGEGIMFHLED--RQGRELGLGPTHEEVITALAADLLRSYRQL 156

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYK 416
           PV L +  + +R+E      GLMR R F   DA+ F   E    +CLK  + L+   Y+
Sbjct: 157 PVNLYQVQTKFRDEIRPRF-GLMRGREFIMKDAYSFHANE----DCLKQTYGLMDQAYR 210


>gi|152977868|ref|YP_001343497.1| prolyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
 gi|171472919|sp|A6VKR5|SYP_ACTSZ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|150839591|gb|ABR73562.1| prolyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
          Length = 571

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 48/202 (23%), Positives = 94/202 (46%), Gaps = 10/202 (4%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-K 288
           +QYL+   +    D + ++ ++ L    I    SG+  W   G K+ + + + +R ++ K
Sbjct: 4   SQYLFSTLKETPNDAQVVSHQLMLRAGMIRSMASGLYNWLPTGVKVLKKVENIIREEMNK 63

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
               E+  P V    LWQ+SG W+ Y   +   + +D   +  R F L P +      + 
Sbjct: 64  GGAIEVLMPVVQSAELWQESGRWEQYGPELL--RFSD---RGNRDFVLGPTHEEVITDLV 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI- 407
              + SY++LP+ L +  + +R+E      G+MR R F   DA+ F T ++   +  ++ 
Sbjct: 119 RREVSSYKQLPLNLYQIQTKFRDEVRPRF-GVMRSREFVMKDAYSFHTTQESLQQTYEVM 177

Query: 408 HNLIISIYKDFGFEKIMVKLST 429
           + +  +I+   G +   V+  T
Sbjct: 178 YQVYTNIFTRLGLDFRAVQADT 199


>gi|183597570|ref|ZP_02959063.1| hypothetical protein PROSTU_00851 [Providencia stuartii ATCC 25827]
 gi|188023065|gb|EDU61105.1| hypothetical protein PROSTU_00851 [Providencia stuartii ATCC 25827]
          Length = 575

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 82/170 (48%), Gaps = 8/170 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++++    E++ P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYDWLPTGVRVLRKVENIVREEMENAGSIEVSLPVVQPADLWQESGRWEQYGPEL-- 93

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           ++ AD   +  R F L P +      +  + + SY++LP+ L +  + +R+E      G+
Sbjct: 94  LRFAD---RGERPFVLGPTHEEVITDLVRNEITSYKQLPLNLFQIQTKFRDEVRPRF-GI 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFEKIMVKLST 429
           MR R F   DA+ F T ++   E    ++     I+   GF+   V+  T
Sbjct: 150 MRSREFIMKDAYSFHTSQESLQETYDAMYEAYSKIFTRIGFDFRAVQADT 199


>gi|239626719|ref|ZP_04669750.1| phosphoribulokinase/uridine kinase [Clostridiales bacterium
           1_7_47_FAA]
 gi|239516865|gb|EEQ56731.1| phosphoribulokinase/uridine kinase [Clostridiales bacterium
           1_7_47FAA]
          Length = 550

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 86/190 (45%), Gaps = 4/190 (2%)

Query: 11  DGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIEIITPEDPRSL 70
           +G ++ +P   T  +VAE          + V +NGK+ +L   V++  +  IT  D   L
Sbjct: 7   NGFVREYPEGTTWLEVAEEYQYQYEDDILLVRVNGKLQELHKHVKDCELTFITARDKPGL 66

Query: 71  AVIRHSCAHIMAEAVQSIWPE---VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQ 127
           A  + S   IM +A  ++       ++ I   +  GF+ +        +D L +++ KM 
Sbjct: 67  ATYQRSACLIMLKAFYAVAGAENIEKIVIDFSLGRGFFVEARGNFVLDNDLLIRVKNKMA 126

Query: 128 EIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPH 187
           E +A+  P +K+ +S + A ELF  +   Y  E L        V +Y    + D   G  
Sbjct: 127 EYVAQQIPIMKRSVSTDDAVELFH-RHRMYDKERLFRYRRVSRVNIYSIDGFEDYYYGYM 185

Query: 188 VRSTGQVKKF 197
           V++TG ++ F
Sbjct: 186 VQNTGYIRYF 195


>gi|196247600|ref|ZP_03146302.1| Proline--tRNA ligase [Geobacillus sp. G11MC16]
 gi|196212384|gb|EDY07141.1| Proline--tRNA ligase [Geobacillus sp. G11MC16]
          Length = 271

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 86/183 (46%), Gaps = 11/183 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E + H+ L R      + +  SGV  +   G ++ Q + + +R ++ +    E+  P 
Sbjct: 17  DAEVKSHQLLLRAG---FVRQSASGVYTFLPLGQRVLQKVEAIIREEMNRAGALELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQQSG W SY   +  +K   +     R F L P +      +    +K+Y+ L
Sbjct: 74  LQPAELWQQSGRWYSYGPELMRLKDRHE-----RDFVLGPTHEEMITTIVRDEVKTYKRL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKD 417
           P+ L +  + +R+E      GL+R R F   DA+ F T ++  +E   K++    +I++ 
Sbjct: 129 PLILYQIQTKFRDEKRPRF-GLLRGREFIMKDAYSFHTSQESLDETYNKMYEAYANIFRR 187

Query: 418 FGF 420
            G 
Sbjct: 188 CGL 190


>gi|89098602|ref|ZP_01171484.1| prolyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
 gi|89086564|gb|EAR65683.1| prolyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
          Length = 568

 Score = 60.8 bits (146), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 10/166 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E R H+ L R      I ++ +GV  +     K+ Q + + +R ++ D    E+  P 
Sbjct: 17  DAEVRSHQLLLRAG---FIRQNAAGVYSYLPMARKVLQKIEAIVREEMDDAGASELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W +Y   +  +K  +D     R FAL   +     ++    +KSY+ L
Sbjct: 74  LQQAELWQESGRWYTYGPELMRLKDRND-----REFALGATHEEVITSLVRDEVKSYKRL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           P+ L +  + +R+E      G++R R F   DA+ F + ++  +E 
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GILRGREFIMKDAYSFHSSQESLDEV 173


>gi|332705120|ref|ZP_08425202.1| prolyl-tRNA synthetase, family II [Lyngbya majuscula 3L]
 gi|332356070|gb|EGJ35528.1| prolyl-tRNA synthetase, family II [Lyngbya majuscula 3L]
          Length = 603

 Score = 60.8 bits (146), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 75/161 (46%), Gaps = 13/161 (8%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+E   H+ L R     +I   GSG+  +    W++ + +   +R ++     +E   PQ
Sbjct: 17  EAEIPSHKLLLRA---GYIRRIGSGIYAYLPMMWRVLKKVSQIVREEMDATGAQECLLPQ 73

Query: 299 VLDQHLWQQSGHWDSY---RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           +    LW++SG WD+Y      MFA+       +  R   L P +      V    ++SY
Sbjct: 74  LQPSELWKESGRWDTYTKAEGIMFAL-----IDRQKRELGLGPTHEEVITTVAKDMIRSY 128

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT 396
           R+LP+ L +  + +R+E      GLMR R F   DA+ F T
Sbjct: 129 RQLPLNLYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSFHT 168


>gi|294783936|ref|ZP_06749258.1| proline--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
 gi|294479748|gb|EFG27527.1| proline--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
          Length = 567

 Score = 60.8 bits (146), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 77/166 (46%), Gaps = 10/166 (6%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
           +E+E   H+ + R   +  +A   SG+  +   G++  + + + +R ++ +    E+  P
Sbjct: 16  KEAEIVSHKLMLRAAMIKKLA---SGIYAYLPLGYRTIRKIENIIREEMDRAGALELLMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            V    LWQ+SG WD   A M  +K   +     R F L P       ++    + SY+ 
Sbjct: 73  VVQPAELWQESGRWDVMGAEMLRLKDRHE-----RDFVLSPTQEEMITSIVRSDISSYKS 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE 403
           LP+ L    + +R+E      GLMR R FT  D + F T ++  +E
Sbjct: 128 LPLNLYHIQTKFRDERRPRF-GLMRGREFTMKDGYSFHTSQESLDE 172


>gi|67922129|ref|ZP_00515644.1| Prolyl-tRNA synthetase, bacterial [Crocosphaera watsonii WH 8501]
 gi|67856029|gb|EAM51273.1| Prolyl-tRNA synthetase, bacterial [Crocosphaera watsonii WH 8501]
          Length = 602

 Score = 60.8 bits (146), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 74/161 (45%), Gaps = 9/161 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E   H+ L R     +I   GSG+  +    W++ Q +   +R ++     +E   PQ
Sbjct: 17  EAEIPSHKLLLRA---GYIRRIGSGIYAYLPLMWRVLQKVSQIVREEMNAAGAQECLLPQ 73

Query: 299 VLDQHLWQQSGHWDSY-RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           +    LW++SG W++Y +A        D   +  R   L P +      V    ++SYR+
Sbjct: 74  LQPSELWKESGRWETYTKAEGIMFSLID---RQERELGLGPTHEEVITTVAKDMIRSYRQ 130

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE 398
           LPV L +  + +R+E      GLMR R F   DA+ F   E
Sbjct: 131 LPVNLYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSFNEDE 170


>gi|283458510|ref|YP_003363138.1| prolyl-tRNA synthetase [Rothia mucilaginosa DY-18]
 gi|283134553|dbj|BAI65318.1| prolyl-tRNA synthetase [Rothia mucilaginosa DY-18]
          Length = 624

 Score = 60.8 bits (146), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 88/192 (45%), Gaps = 19/192 (9%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R     +I     GV  W   G K+ + + + +R ++     +E++ P 
Sbjct: 33  DAEVASHKLLVRA---GYIRRAAPGVYTWLPLGLKVLRKVENIIREEMDAIGAQEVHFPA 89

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L +  ++ +  WD Y  N+F +K  D    D+       +  P H  +F   +K    S
Sbjct: 90  LLPREPYEATNRWDEYGDNLFRLK--DRKGADM-------LLAPTHEEMFTLLVKDLYSS 140

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS- 413
           Y++LPV L +  + YR+E      GL+R R F   D++ F   ++  NE    H      
Sbjct: 141 YKDLPVYLYQIQTKYRDEAR-PRAGLLRGREFVMKDSYSFNIDDEGLNEAYMAHRAAYQR 199

Query: 414 IYKDFGFEKIMV 425
           I++  G E ++V
Sbjct: 200 IFERLGLEIVIV 211


>gi|261338808|ref|ZP_05966666.1| hypothetical protein ENTCAN_05003 [Enterobacter cancerogenus ATCC
           35316]
 gi|288318631|gb|EFC57569.1| proline--tRNA ligase [Enterobacter cancerogenus ATCC 35316]
          Length = 572

 Score = 60.8 bits (146), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 76/170 (44%), Gaps = 8/170 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E+  P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVLMPVVQPSELWQESGRWEQYGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +    D     R F L P +      +  + L SY++LP+   +  + +R+E      G+
Sbjct: 96  IADRGD-----RPFVLGPTHEEVITDLIRNELSSYKQLPLNFFQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFEKIMVKLST 429
           MR R F   DA+ F T ++   E   K++     I+   G +   V+  T
Sbjct: 150 MRSREFLMKDAYSFHTSQESLQETYDKMYEAYSKIFSRMGLDFRAVQADT 199


>gi|172039373|ref|YP_001805874.1| prolyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
 gi|171700827|gb|ACB53808.1| prolyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
          Length = 623

 Score = 60.8 bits (146), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 75/163 (46%), Gaps = 13/163 (7%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E   H+ L R     +I   GSG+  +    W++ Q +   +R ++     +E   PQ
Sbjct: 37  EAEIPSHKLLLRA---GYIRRIGSGIYAYLPLMWRVLQKVSQIVREEMNAAGAQECLLPQ 93

Query: 299 VLDQHLWQQSGHWDSY---RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           +    LW++SG W++Y      MF++    D     R   L P +      V    ++SY
Sbjct: 94  LQPSELWKESGRWETYTKAEGIMFSLIDRQD-----RELGLGPTHEEVITTVAKDMIRSY 148

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE 398
           R+LPV L +  + +R+E      GLMR R F   DA+ F   E
Sbjct: 149 RQLPVNLYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSFNEDE 190


>gi|329298700|ref|ZP_08256036.1| prolyl-tRNA synthetase [Plautia stali symbiont]
          Length = 572

 Score = 60.8 bits (146), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 44/176 (25%), Positives = 82/176 (46%), Gaps = 9/176 (5%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           TQYL    +    D   ++ ++ L    I +  SG+  W   G ++ + + + +R ++ +
Sbjct: 4   TQYLLSTLKETPSDAEVISHQLMLRAGMIRKLASGLYTWLPTGIRVLRKVENIVREEMNN 63

Query: 290 DYE-EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
               EI+ P V    LW++SG W+ Y   +  +K   +     R F L P +      + 
Sbjct: 64  AGAIEISMPVVQPADLWEESGRWEQYGPELLRIKDRHE-----RPFVLGPTHEEVVTDLI 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
            + L SY++LP+ + +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 119 RNELSSYKQLPLNVYQIQTKFRDEVRPRF-GVMRSREFIMKDAYSFHTSQESLQET 173


>gi|304383408|ref|ZP_07365874.1| phosphoribulokinase [Prevotella marshii DSM 16973]
 gi|304335576|gb|EFM01840.1| phosphoribulokinase [Prevotella marshii DSM 16973]
          Length = 554

 Score = 60.8 bits (146), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 44/183 (24%), Positives = 83/183 (45%), Gaps = 2/183 (1%)

Query: 16  NFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIR 74
           N  + +T SDV +     +    V+  +N KV  +   V R   IE +    P  L    
Sbjct: 18  NVAIGSTLSDVFQFTRLEMKHGPVSAKVNNKVEGMHYRVYRNKDIEFLDLTSPSGLRTYT 77

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDS 134
            +   ++ +AV  ++   +V I   + +G+Y + +   P +  +  +I ++MQEI+    
Sbjct: 78  RTLFLVLCKAVHDLYSGSEVVIDIPVSNGYYCNLNLGHPVTDVDADKIRRRMQEIVDAHL 137

Query: 135 PFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQV 194
           P  +   + E+A  +FE+  +  KV++L SI A      Y    + D   G  + +T Q+
Sbjct: 138 PLRRHETTTEEAIRMFETVGDMPKVKLLRSIGALY-TAYYDLDGYKDYYYGSMLTNTSQL 196

Query: 195 KKF 197
           + F
Sbjct: 197 RLF 199


>gi|73662814|ref|YP_301595.1| prolyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|114152258|sp|Q49X48|SYP_STAS1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|72495329|dbj|BAE18650.1| prolyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 566

 Score = 60.8 bits (146), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 43/164 (26%), Positives = 78/164 (47%), Gaps = 8/164 (4%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  SG+  +     ++   + + +R +++  D  EI  P +    LW++SG W +Y  
Sbjct: 32  IKQSTSGIYSYLPLAARVLNNIEAIVREEMERIDAVEILMPALQQAELWEESGRWSAYGP 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            +  ++      ++ R FAL P +     ++    LKSY++LP+ L +  S YR+E    
Sbjct: 92  ELMRLQD-----RNGREFALGPTHEEVVTSIVRDELKSYKQLPLTLFQIQSKYRDEKRPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDFG 419
             GL+R R F   DA+ F   E   +   + ++N    I+K  G
Sbjct: 147 F-GLLRGREFIMKDAYSFHADEDSLDASYQDMYNAYGRIFKRVG 189


>gi|327401992|ref|YP_004342831.1| Prolyl-tRNA synthetase [Archaeoglobus veneficus SNP6]
 gi|327317500|gb|AEA48116.1| Prolyl-tRNA synthetase [Archaeoglobus veneficus SNP6]
          Length = 482

 Score = 60.8 bits (146), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 87/396 (21%), Positives = 158/396 (39%), Gaps = 61/396 (15%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVL-DQHLWQQSGHWDSYRANMFAVK 322
           G+  W+  G+KI Q +   +R  +  D++E+  P ++ +  L ++  H   +   ++ V 
Sbjct: 37  GLYVWYPFGFKIRQLVYGKLREIMDRDHDEVYFPALIPETELGREGEHIKGFEDEVYWVT 96

Query: 323 CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMR 382
               T  D++  AL+P +      +F   ++S+ +LP+++ +  + +R E +     L+R
Sbjct: 97  HGGLTPLDVK-LALRPTSETAMYPMFKLWIRSHADLPLKVYQIVNTFRYE-TKHTRPLIR 154

Query: 383 VRGFTQ-DDAHVFCTKEQMFNECLKIHNLIISIYKDF-GFEKIMVKLSTRPEKRVGSDAL 440
           +R  T   +AH   T  + F E  +     +  YK+F  F  I   +  RPE        
Sbjct: 155 LREITSFKEAH---TVHRTFEEAEEQVRKAVGYYKEFYDFLAIPYLVIRRPE-------- 203

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI-QVD 499
           WD                             GA Y   F+ ++ D  GR  Q GT+  + 
Sbjct: 204 WDKF--------------------------PGAAYTIAFDTVMPD--GRTMQIGTVHHLG 235

Query: 500 FNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQA 555
            N    F   Y     E       H+  +G  ER I  +I    ++    LP  +SP Q 
Sbjct: 236 DNFARTFGITYEKPDGEH---EFAHQTCYGISERCIAALISIHGDDLGLILPFEVSPTQI 292

Query: 556 IVTTIT-----SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           ++  +         +E  ++I + LK     +  D  +E    K     +K   + I  G
Sbjct: 293 VIIPVLYKGKEKEVLELCEKIFDRLKGFGYRVLLDDSDERPGAKYYRWELKGAAMRIEVG 352

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
            KE +E ++ +         K+S+ +    LTKE +
Sbjct: 353 PKEVAENAVVVSFRDERKKFKISVEE----LTKERI 384


>gi|255326388|ref|ZP_05367472.1| proline--tRNA ligase [Rothia mucilaginosa ATCC 25296]
 gi|255296605|gb|EET75938.1| proline--tRNA ligase [Rothia mucilaginosa ATCC 25296]
          Length = 610

 Score = 60.8 bits (146), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 88/192 (45%), Gaps = 19/192 (9%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R     +I     GV  W   G K+ + + + +R ++     +E++ P 
Sbjct: 19  DAEVASHKLLVRAG---YIRRAAPGVYTWLPLGLKVLRKVENIIREEMDAIGAQEVHFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L +  ++ +  WD Y  N+F +K  D    D+       +  P H  +F   +K    S
Sbjct: 76  LLPREPYEATNRWDEYGDNLFRLK--DRKGADM-------LLAPTHEEMFTLLVKDLYSS 126

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS- 413
           Y++LPV L +  + YR+E      GL+R R F   D++ F   ++  NE    H      
Sbjct: 127 YKDLPVYLYQIQTKYRDEAR-PRAGLLRGREFVMKDSYSFNIDDEGLNEAYMAHRAAYQR 185

Query: 414 IYKDFGFEKIMV 425
           I++  G E ++V
Sbjct: 186 IFERLGLEIVIV 197


>gi|253999985|ref|YP_003052048.1| prolyl-tRNA synthetase [Methylovorus sp. SIP3-4]
 gi|253986664|gb|ACT51521.1| prolyl-tRNA synthetase [Methylovorus sp. SIP3-4]
          Length = 574

 Score = 60.8 bits (146), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 79/171 (46%), Gaps = 16/171 (9%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           TQ+E  Q      E+E   HR + R   +  +   GSG+  W   G ++ + + + +R +
Sbjct: 10  TQKEAPQ------EAELPSHRLMLRAGLIKRL---GSGLYTWMPLGLRVLRKVETVVRDE 60

Query: 287 I-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           + K    E+  P V    LWQ++G WD +   M  +     T +  R+F   P +     
Sbjct: 61  MNKAGALELLMPAVQPAELWQETGRWDVFGPQMLKI-----TDRHERSFCFGPTHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT 396
            +    +KSY++LP+   +  + +R+E      G+MR R F   DA+ F T
Sbjct: 116 DLARREIKSYKQLPLNFYQIQTKFRDEIRPRF-GVMRAREFVMKDAYSFHT 165


>gi|218463078|ref|ZP_03503169.1| prolyl-tRNA synthetase [Rhizobium etli Kim 5]
          Length = 440

 Score = 60.8 bits (146), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 49/195 (25%), Positives = 84/195 (43%), Gaps = 11/195 (5%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTP 297
           +E+E   HR + R      I +   G+  W   G ++   + + +R  + +    E++ P
Sbjct: 16  KEAEIVSHRLMLRAG---MIRQQSQGIYSWLPLGKRVLDKVNAIIRDEQNRAGAIELSMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LWQ+SG +D+Y   M  +K   D     R     P N      +F   +KSY++
Sbjct: 73  TLQSAELWQESGRYDAYGKEMLRIKDRQD-----RPMLYGPTNEEMVTDIFRSSVKSYKD 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYK 416
           LP+ L      +R+E      G MR R F   DA+ F  T+E   +   K+    +  ++
Sbjct: 128 LPLNLYHIQLKFRDEIRPRF-GTMRSREFMMKDAYSFDLTREGAEHSYNKMFAAYLRTFE 186

Query: 417 DFGFEKIMVKLSTRP 431
             G   I ++  T P
Sbjct: 187 RLGLRAIPMRADTGP 201


>gi|126659940|ref|ZP_01731064.1| prolyl-tRNA synthetase [Cyanothece sp. CCY0110]
 gi|126618804|gb|EAZ89549.1| prolyl-tRNA synthetase [Cyanothece sp. CCY0110]
          Length = 598

 Score = 60.8 bits (146), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 74/161 (45%), Gaps = 9/161 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E   H+ L R     +I   GSG+  +    W++ Q +   +R ++     +E   PQ
Sbjct: 12  EAEIPSHKLLLRA---GYIRRIGSGIYAYLPLMWRVLQKVSQIVREEMNAAGAQECLLPQ 68

Query: 299 VLDQHLWQQSGHWDSY-RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           +    LW++SG W++Y +A        D   +  R   L P +      V    ++SYR+
Sbjct: 69  LQPSELWKESGRWETYTKAEGIMFSLID---RQERELGLGPTHEEVITTVAKDMIRSYRQ 125

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE 398
           LPV L +  + +R+E      GLMR R F   DA+ F   E
Sbjct: 126 LPVNLYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSFNENE 165


>gi|198277462|ref|ZP_03209993.1| hypothetical protein BACPLE_03684 [Bacteroides plebeius DSM 17135]
 gi|198269960|gb|EDY94230.1| hypothetical protein BACPLE_03684 [Bacteroides plebeius DSM 17135]
          Length = 554

 Score = 60.8 bits (146), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 44/188 (23%), Positives = 86/188 (45%), Gaps = 2/188 (1%)

Query: 11  DGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRS 69
           + S + FP  ++  D+    + ++    V+  +N KV  L   V     IE +       
Sbjct: 9   NNSTREFPEGSSLLDIYNGFNLAMPYGPVSAKVNNKVESLDFRVYYNKDIEFLDITSSSG 68

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           +     S   I+ +AV+ ++P+  +++   I  G++     ++    D++ +I++KMQEI
Sbjct: 69  MRTYVRSLFFILVKAVEELYPQGSISLEHPISKGYFCKLHIDRTIGLDDVQRIKQKMQEI 128

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
           IA D P+ +     E+   LFE +    K  +L++   +     Y+ G+  D      V 
Sbjct: 129 IAADIPYTRTESHTEEVVRLFEKRGMMDKARLLDTY-GQLYSYYYQLGDTVDCYYSSLVP 187

Query: 190 STGQVKKF 197
           STG ++ F
Sbjct: 188 STGYIRLF 195


>gi|114566628|ref|YP_753782.1| uridine kinase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|114337563|gb|ABI68411.1| uridine kinase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 557

 Score = 60.8 bits (146), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 36/148 (24%), Positives = 80/148 (54%), Gaps = 2/148 (1%)

Query: 16  NFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDP-VREGSIEIITPEDPRSLAVIR 74
           N P   + +++ + + + L    +A+ I+ ++ DL+    R  +IE++       + + R
Sbjct: 22  NVPEGTSVAELVKKLEKKLIYPVMAIIIDNRLRDLNYRFTRSCAIELVDMNSEIGVRIYR 81

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDS 134
            S + ++ +A + ++PE  + +   + +G   +F  E    ++E+  IEK+MQEI+  + 
Sbjct: 82  RSMSFLLMKAARDLFPERVLTVKHSLSNGLLCEFLNEDS-RTEEIEAIEKRMQEIVEDNL 140

Query: 135 PFLKQYLSHEKARELFESKKEAYKVEIL 162
           P  +  ++ EKA+E+F  + E  KV++L
Sbjct: 141 PIRRMRINKEKAQEIFREQGEEDKVKLL 168


>gi|325577191|ref|ZP_08147675.1| proline--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
 gi|325160773|gb|EGC72894.1| proline--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
          Length = 571

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 8/170 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   GW++ + +   +R ++ K    EI  P V    LW++SG W+ Y   +  
Sbjct: 36  ASGLYNWMPTGWRVLRKVEKIIREEMDKSGALEIKMPVVQPAELWEESGRWEQYGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +   +     R F L P +      +    + SYR+LP+ L +  + +R+E      G+
Sbjct: 96  FEDRGN-----RHFVLGPTHEEVITDLVRREVSSYRQLPINLYQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKI-HNLIISIYKDFGFEKIMVKLST 429
           MR R F   DA+ F        +  ++ +    +I+   G +   V+  T
Sbjct: 150 MRSREFIMKDAYSFHADHSSLQQTYEVMYQTYSNIFNRLGLDFRAVQADT 199


>gi|257784517|ref|YP_003179734.1| prolyl-tRNA synthetase [Atopobium parvulum DSM 20469]
 gi|257473024|gb|ACV51143.1| prolyl-tRNA synthetase [Atopobium parvulum DSM 20469]
          Length = 565

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 71/160 (44%), Gaps = 10/160 (6%)

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHL 304
           HR L R      I +  +G+  +    W+    + + +R ++     +EI  P +    L
Sbjct: 21  HRLLLRAG---MIRKTAAGLYSYLPLAWRSLLKIEAIIRDEMDGIGAQEILVPIMTPAEL 77

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SG WD Y   +  +    D     R FAL P +      +  + LKSY++LPV L +
Sbjct: 78  WEESGRWDVYGDELMRMHDRHD-----RQFALGPTHEETFTDLIRNELKSYKQLPVTLYQ 132

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
               +R+E      GLMR R F   D + F   ++   EC
Sbjct: 133 IQDKFRDERRPRF-GLMRGREFIMKDGYSFSANQESLQEC 171


>gi|220906778|ref|YP_002482089.1| prolyl-tRNA synthetase [Cyanothece sp. PCC 7425]
 gi|254782895|sp|B8HNJ7|SYP_CYAP4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|219863389|gb|ACL43728.1| prolyl-tRNA synthetase [Cyanothece sp. PCC 7425]
          Length = 613

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 83/187 (44%), Gaps = 14/187 (7%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E   H+ L R     +I   GSGV  +    W++   +   +R+++     +E   PQ
Sbjct: 17  EAEIPSHKLLLRA---GYIRRIGSGVYAYLPLMWRVLGKVSQIVRQEMNAAGAQECLLPQ 73

Query: 299 VLDQHLWQQSGHWDSY---RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           +    LWQ+SG WD+Y      MFA+    D     R   L P +      +    +++Y
Sbjct: 74  IQPAELWQESGRWDTYTKAEGIMFALTDRQD-----RQLGLGPTHEEVITTIARDLIRTY 128

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISI 414
           R+LP  L +  + +R+E      GLMR R F   DA+ F    E +     K+H    +I
Sbjct: 129 RQLPQNLYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSFDADVESLRVAYGKMHQAYCNI 187

Query: 415 YKDFGFE 421
            +  G +
Sbjct: 188 LQRCGLK 194


>gi|138894777|ref|YP_001125230.1| prolyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
 gi|166980126|sp|A4IMD1|SYP_GEOTN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|134266290|gb|ABO66485.1| Prolyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
          Length = 567

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 86/183 (46%), Gaps = 11/183 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E + H+ L R      + +  SGV  +   G ++ Q + + +R ++ +    E+  P 
Sbjct: 17  DAEVKSHQLLLRAG---FVRQSASGVYTFLPLGQRVLQKVEAIIREEMNRAGALELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQQSG W SY   +  +K   +     R F L P +      +    +K+Y+ L
Sbjct: 74  LQPAELWQQSGRWYSYGPELMRLKDRHE-----RDFVLGPTHEEMITTIVRDEVKTYKRL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKD 417
           P+ L +  + +R+E      GL+R R F   DA+ F T ++  +E   K++    +I++ 
Sbjct: 129 PLILYQIQTKFRDEKRPRF-GLLRGREFIMKDAYSFHTSQESLDETYNKMYEAYANIFRR 187

Query: 418 FGF 420
            G 
Sbjct: 188 CGL 190


>gi|261405336|ref|YP_003241577.1| prolyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
 gi|261281799|gb|ACX63770.1| prolyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
          Length = 575

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 69/139 (49%), Gaps = 7/139 (5%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYR 315
           +I +  +G+  +   GW++ + + + +R+++     +E+  P V    LW++SG +D Y 
Sbjct: 31  YIRQTAAGIYSYLPLGWRVLRKIETIIRQEMDAAGGQELLMPAVQPAELWKESGRYDVYG 90

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
           A +  +    D     R F L P +     ++    + SYR+LPV L +  S YR+E   
Sbjct: 91  AELIRLYDRHD-----REFVLGPTHEEVITSIVRQEISSYRKLPVNLYQIQSKYRDERRP 145

Query: 376 SLHGLMRVRGFTQDDAHVF 394
              GL+R R F   DA+ F
Sbjct: 146 RF-GLLRGREFLMKDAYSF 163


>gi|91205619|ref|YP_537974.1| prolyl-tRNA synthetase [Rickettsia bellii RML369-C]
 gi|157827332|ref|YP_001496396.1| prolyl-tRNA synthetase [Rickettsia bellii OSU 85-389]
 gi|114152245|sp|Q1RIC9|SYP_RICBR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|166980150|sp|A8GU77|SYP_RICB8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|91069163|gb|ABE04885.1| Prolyl-tRNA synthetase [Rickettsia bellii RML369-C]
 gi|157802636|gb|ABV79359.1| prolyl-tRNA synthetase [Rickettsia bellii OSU 85-389]
          Length = 432

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 85/398 (21%), Positives = 157/398 (39%), Gaps = 32/398 (8%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  +G+  W   G K+ + + + +R  + K    E+  P +   HLW +SG +D+Y  
Sbjct: 32  IRQQAAGIYSWLPLGLKVLKNIENIVRSNMDKAGCLEVLMPCIQPAHLWVESGRFDNYGK 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M   +   D      T    P N      +F + +KSY++LP  L      +R+E    
Sbjct: 92  EMLKFQDRHDN-----TLLFGPTNEDMVTDIFRNNIKSYKDLPKNLYHIQWKFRDEIRPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQ----MFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
             G+MR R F   DA+ F   E+     +N+  K +   I+ ++D G   + V     P 
Sbjct: 147 F-GVMRGREFLMKDAYSFDIDEESAVKTYNQMYKAY---INTFRDLGVFAVPVIADNGPI 202

Query: 433 KRVGSDALWDDAENIMKGV-----LDTIKNSSQ---DRINTGVLLGEGAFYGPKFEYILK 484
               S      AE     +       T+K++     + I +     E      K     +
Sbjct: 203 GGKLSHEFHIIAETGESNIYYDKRFKTLKDNPDIDIEEIKSWYAAAEEKHDASKLSSDKE 262

Query: 485 DAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE--- 540
               +  + G I  +        NA  +N    K  P+ +     G I R +  +IE   
Sbjct: 263 ITSSKGIEVGHIFYIGTKYSVNMNAL-INDEHGKLTPIEMSSYGIG-ISRLVAAIIEANS 320

Query: 541 NFKGNL-PLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           + KG + P+ ++P +  +  +    S  +E A+ + N L + ++ +  D  +     K  
Sbjct: 321 DAKGIIWPIAVAPFKISLINLNIHDSKCLELAERVYNELLAQNIEVLYDDTDVRAGSKFA 380

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
            H +   P  II G K+A+   + ++   +   + + L
Sbjct: 381 THDLIGSPYQIIIGPKKAANNIVELKNRKNGEIEDIDL 418


>gi|299534746|ref|ZP_07048076.1| prolyl-tRNA synthetase 1 [Lysinibacillus fusiformis ZC1]
 gi|298729834|gb|EFI70379.1| prolyl-tRNA synthetase 1 [Lysinibacillus fusiformis ZC1]
          Length = 568

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 81/170 (47%), Gaps = 18/170 (10%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINT--- 296
           ++E + H++L R      I ++ SGV  +      + + +++ +   I+++ E IN+   
Sbjct: 17  DAEVKSHKQLLRAG---FIRQNTSGVYSY----LPLAKRVLTKIETIIREEMEAINSIEL 69

Query: 297 --PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
             P +    LWQ+SG W+ Y   +  +K   D     R FAL P +      +    +KS
Sbjct: 70  LMPSLQSAELWQESGRWEKYGPELMRLKDRHD-----RDFALGPTHEEVITTLVRDEIKS 124

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           Y++LP+ L +  + +R+E      GL+R R F   DA+ F    +  +E 
Sbjct: 125 YKKLPLTLYQIQTKFRDEKRPRF-GLLRGREFIMKDAYSFHASRESLDET 173


>gi|282896497|ref|ZP_06304517.1| Prolyl-tRNA synthetase [Raphidiopsis brookii D9]
 gi|281198603|gb|EFA73484.1| Prolyl-tRNA synthetase [Raphidiopsis brookii D9]
          Length = 604

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 77/169 (45%), Gaps = 9/169 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           ++E   H+ L R     +I   GSGV  +    W++ Q +   +R ++     EE   PQ
Sbjct: 18  DAEIPSHKLLLRAG---YIRRIGSGVYAYLPLMWRVLQKISQIIREEMNATGAEECLLPQ 74

Query: 299 VLDQHLWQQSGHWDSY-RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           +    LW++SG WD+Y +A        D   + L    L P +      +    ++SYR+
Sbjct: 75  LQPAELWKESGRWDTYTKAEGIMFSLIDRREQHL---GLGPTHEEVITTIGRDMIRSYRQ 131

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           LPV L +  + +R+E      GLMR R F   D + F T E+   +  +
Sbjct: 132 LPVHLYQIQTKFRDEIRPRF-GLMRGREFIMKDGYSFHTDEESLKKTYQ 179


>gi|162329642|ref|YP_469149.2| prolyl-tRNA synthetase [Rhizobium etli CFN 42]
 gi|114152238|sp|Q2K9R4|SYP_RHIEC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
          Length = 440

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 49/195 (25%), Positives = 84/195 (43%), Gaps = 11/195 (5%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTP 297
           +E+E   HR + R      I +   G+  W   G ++   + + +R  + +    E++ P
Sbjct: 16  KEAEIVSHRLMLRAG---MIRQQSQGIYSWLPLGKRVLDKVNAIIREEQNRAGAIELSMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LWQ+SG +D+Y   M  +K   D     R     P N      +F   +KSY++
Sbjct: 73  TLQSAELWQESGRYDAYGKEMLRIKDRQD-----RPMLYGPTNEEMVTDIFRSSVKSYKD 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYK 416
           LP+ L      +R+E      G MR R F   DA+ F  T+E   +   K+    +  ++
Sbjct: 128 LPLNLYHIQLKFRDEIRPRF-GTMRSREFMMKDAYSFDLTREGAEHSYNKMFAAYLRTFE 186

Query: 417 DFGFEKIMVKLSTRP 431
             G   I ++  T P
Sbjct: 187 RLGLRAIPMRADTGP 201


>gi|304315915|ref|YP_003851060.1| prolyl-tRNA synthetase [Thermoanaerobacterium thermosaccharolyticum
           DSM 571]
 gi|302777417|gb|ADL67976.1| prolyl-tRNA synthetase [Thermoanaerobacterium thermosaccharolyticum
           DSM 571]
          Length = 570

 Score = 60.5 bits (145), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 67/134 (50%), Gaps = 7/134 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SGV  +   G ++ + +   +R ++ +   +E+  P ++   L ++SG WD +   MF 
Sbjct: 36  ASGVYIYLPLGKRVLKKIEEIVREEMDRAGAQEVLMPAIIPAELLKESGRWDVFGPEMFK 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +K  +D     R F L P +      +  + +KSYR+LP+ + +  + YR+E      G+
Sbjct: 96  LKDRND-----REFCLGPTHEEVFTDLVRNEVKSYRQLPLTIYQIQTKYRDERRPRF-GV 149

Query: 381 MRVRGFTQDDAHVF 394
           MR R F   DA+ F
Sbjct: 150 MRSREFIMKDAYSF 163


>gi|254413846|ref|ZP_05027615.1| prolyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420]
 gi|196179443|gb|EDX74438.1| prolyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420]
          Length = 596

 Score = 60.5 bits (145), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 75/163 (46%), Gaps = 13/163 (7%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+E   H+ L R     +I   GSG+  +    W++ Q +   +R ++     +E   PQ
Sbjct: 12  EAEIPSHKLLVRA---GYIRRIGSGIYAYLPLMWRVLQKVSQIVREEMNATGAQECLLPQ 68

Query: 299 VLDQHLWQQSGHWDSY---RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           +    LW++SG WD+Y      MFA+     + +  R   L P +      +    ++SY
Sbjct: 69  LQPSDLWRESGRWDTYTKAEGIMFAL-----SDRQNRELGLGPTHEEVITTIAREMIRSY 123

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE 398
           R+LP+ L +  + +R+E      GLMR R F   D + F   E
Sbjct: 124 RQLPLHLYQIQTKFRDEIRPRF-GLMRGREFIMKDGYSFHVNE 165


>gi|254455357|ref|ZP_05068786.1| prolyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211]
 gi|207082359|gb|EDZ59785.1| prolyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211]
          Length = 444

 Score = 60.5 bits (145), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 101/461 (21%), Positives = 179/461 (38%), Gaps = 93/461 (20%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E++ + H+ + R   +  I +  +G+  W   G+K+ + +   +R  + K   +EI  P 
Sbjct: 17  EAKIKSHQLMLR---VGMIKQASAGIYSWLPLGFKVMKKIEKIVREEQDKIGAQEILMPT 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    +W++SG +D Y   M  +K   +     R     P N      +F   LKSY+ L
Sbjct: 74  IQSSEIWKESGRYDDYGEEMLRIKDRQN-----REMLYGPTNEEQVTEIFRSSLKSYKSL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKD 417
           P  L      +R+E      G+MR R F   DA+ F  T E  F    K     +  +K 
Sbjct: 129 PQLLYHIQWKFRDEIRPRF-GIMRGREFYMKDAYSFDITDEDAFFSYNKFFLSYLRTFKR 187

Query: 418 FGFEKIMVKLSTRP----------------EKRVGSDA----LWDDAENIMKGVLDTIKN 457
                I +   T P                E ++ +D     L +D   + K  L+ ++ 
Sbjct: 188 LSLTAIPMAADTGPIGGNLSHEFIILADTGESKIFTDKRIFDLTNDDTELEKSSLEQMRK 247

Query: 458 ----------------------SSQDR-INTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
                                 S ++R I  G+ +G   ++G K+   +  A+       
Sbjct: 248 RYEKFYSVTDEKFNKVEFEKMVSEENRLITKGIEVGHIFYFGDKYSKAMDTAV------- 300

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG-SIERFIGIMI------ENFKGNLP 547
                 +LP     F             +    +G  + R +G +I      EN     P
Sbjct: 301 ------DLPGGKKDF-------------VKMGSYGIGVSRLVGAIIEAKYDDENEIMKWP 341

Query: 548 LWLSPIQ-AIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           L ++P   A++  I    +SA+E A +I + L  +++    D  +E  + KI++ ++   
Sbjct: 342 LSVAPYDIALIPMINKNDNSALEKANKINSELIRNNIEAIIDDTDENYSSKIKKMNLIGA 401

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P  II G K  S+  +   +     TQ +SL   I I+TK+
Sbjct: 402 PYQIIIGKK--SDGDLLEFKEPGGETQNLSLEKIIEIITKQ 440


>gi|313201958|ref|YP_004040616.1| prolyl-tRNA synthetase [Methylovorus sp. MP688]
 gi|312441274|gb|ADQ85380.1| prolyl-tRNA synthetase [Methylovorus sp. MP688]
          Length = 574

 Score = 60.5 bits (145), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 79/171 (46%), Gaps = 16/171 (9%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           TQ+E  Q      E+E   HR + R   +  +   GSG+  W   G ++ + + + +R +
Sbjct: 10  TQKEAPQ------EAELPSHRLMLRAGLIKRL---GSGLYTWMPLGLRVLRKVETVVRDE 60

Query: 287 I-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           + K    E+  P V    LWQ++G WD +   M  +     T +  R+F   P +     
Sbjct: 61  MNKAGALELLMPAVQPAELWQETGRWDVFGPQMLKI-----TDRHERSFCFGPTHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT 396
            +    +KSY++LP+   +  + +R+E      G+MR R F   DA+ F T
Sbjct: 116 DLARREIKSYKQLPLNFYQIQTKFRDEIRPRF-GVMRAREFVMKDAYSFHT 165


>gi|300864298|ref|ZP_07109176.1| Prolyl-tRNA synthetase [Oscillatoria sp. PCC 6506]
 gi|300337687|emb|CBN54322.1| Prolyl-tRNA synthetase [Oscillatoria sp. PCC 6506]
          Length = 601

 Score = 60.5 bits (145), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 77/169 (45%), Gaps = 13/169 (7%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+E   H+ L R     +I   GSGV  +    W++ + +   +R ++     +E   PQ
Sbjct: 17  EAEIPSHKLLLRA---GYIRRIGSGVYVYLPLLWRVLKKVSQIVREEMDATGAQECLLPQ 73

Query: 299 VLDQHLWQQSGHWDSY---RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           +    LW++SG WD+Y      MFA+     T +  R   L P +      +    ++SY
Sbjct: 74  LQPAELWRESGRWDTYTKAEGIMFAL-----TDRQNRELGLGPTHEEVITTIAKDMIRSY 128

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           R+LP+ L +  + +R+E      GLMR R F   D + F   E+   + 
Sbjct: 129 RQLPLHLYQIQTKFRDEIRPRF-GLMRGREFIMKDGYSFHKDEESLKKT 176


>gi|134095943|ref|YP_001101018.1| prolyl-tRNA synthetase [Herminiimonas arsenicoxydans]
 gi|166980129|sp|A4G8R0|SYP_HERAR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|133739846|emb|CAL62897.1| Prolyl-tRNA synthetase (Proline--tRNA ligase) (ProRS) (Global RNA
           synthesis factor) [Herminiimonas arsenicoxydans]
          Length = 577

 Score = 60.5 bits (145), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 75/162 (46%), Gaps = 8/162 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
           GSG+  +   G ++ + + + +R ++   +  E+  P V    LWQ++G WD     +  
Sbjct: 36  GSGIYTYMPIGLRVIRKVEAIVREEMNRAHAIELLMPLVQPAELWQETGRWDKMGPELMR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           VK      +  R +A++P +      V    +KSYR+LP+      + +R+E      GL
Sbjct: 96  VKD-----RHGREYAIQPTSEEVVTDVVRSEIKSYRQLPLNFYHIQTKFRDERRPRF-GL 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKI-HNLIISIYKDFGFE 421
           MR R FT  DA+ F    +      +I  +  + I+  FG +
Sbjct: 150 MRGREFTMKDAYSFDRDAEGLKRSYQIMFDAYVKIFNRFGLQ 191


>gi|295098681|emb|CBK87771.1| prolyl-tRNA synthetase, family II [Enterobacter cloacae subsp.
           cloacae NCTC 9394]
          Length = 572

 Score = 60.5 bits (145), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 76/170 (44%), Gaps = 8/170 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E+  P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVLMPVVQPSELWQESGRWEQYGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +    D     R F L P +      +  + L SY++LP+   +  + +R+E      G+
Sbjct: 96  IADRGD-----RPFVLGPTHEEVITDLIRNELSSYKQLPLNFFQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFEKIMVKLST 429
           MR R F   DA+ F T ++   E   K++     I+   G +   V+  T
Sbjct: 150 MRSREFLMKDAYSFHTSQESLQETYDKMYAAYSKIFSRMGLDFRAVQADT 199


>gi|161344762|ref|NP_441328.2| prolyl-tRNA synthetase [Synechocystis sp. PCC 6803]
 gi|114152887|sp|P73942|SYP_SYNY3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
          Length = 603

 Score = 60.5 bits (145), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 72/141 (51%), Gaps = 10/141 (7%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRAN--- 317
           GSG+  +    W++ + +   ++ ++ +   +E   PQ+    LW+ SG WD+Y  +   
Sbjct: 36  GSGLYAYLPLIWRVLEKVKRIVQEEMNRTGAQECLLPQLQPSELWKMSGRWDTYTESEGI 95

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           MFA++   D ++  R   L P +     A+    ++SYR+LPV L +  + +R+E     
Sbjct: 96  MFALR---DRLE--RELGLGPTHEEVITAIAKEMIRSYRQLPVNLYQIQTKFRDEIRPRF 150

Query: 378 HGLMRVRGFTQDDAHVFCTKE 398
            GLMR R F   DA+ F + E
Sbjct: 151 -GLMRGREFIMKDAYSFHSDE 170


>gi|307609489|emb|CBW98986.1| prolyl-tRNA synthetase [Legionella pneumophila 130b]
          Length = 569

 Score = 60.5 bits (145), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 39/170 (22%), Positives = 78/170 (45%), Gaps = 8/170 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
           GSG+  W   G ++ + + + +R ++   +  E+  P V    LWQ++G W+++   +  
Sbjct: 36  GSGLYTWMPLGLRVLRKVENIVREEMNKTHAMELLMPSVQPAELWQETGRWETFGGQLLT 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +K ++      R +   P +      +  + L+SY++LPV   +  + +R+E      G+
Sbjct: 96  MKDSNQ-----REYCFGPTHEEVITDIMRNELQSYKQLPVNFYQIQTKFRDEIRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDFGFEKIMVKLST 429
           MR R F   DA+ F    +   E  K ++     I+   G +   V+  T
Sbjct: 150 MRAREFIMKDAYSFHLSLESLQETYKDMYQAYCRIFDRMGLKYRAVEADT 199


>gi|291533301|emb|CBL06414.1| Threonyl-tRNA synthetase [Megamonas hypermegale ART12/1]
          Length = 60

 Score = 60.5 bits (145), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/40 (67%), Positives = 31/40 (77%), Gaps = 1/40 (2%)

Query: 171 VTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRG 210
           +T+Y QGE+ DLC GPHV STG+VK   KL  VAGAYWRG
Sbjct: 2   ITMYSQGEFTDLCAGPHVVSTGKVKA-IKLQSVAGAYWRG 40


>gi|291613215|ref|YP_003523372.1| prolyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1]
 gi|291583327|gb|ADE10985.1| prolyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1]
          Length = 566

 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/184 (23%), Positives = 82/184 (44%), Gaps = 11/184 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+E   HR + R     +I +  SG+  W   G ++ + + + +R ++ K    E+  P 
Sbjct: 17  EAELPSHRLMLRAG---YIRKLSSGLYTWMPLGLRVLRKVEAVVREEMNKSGGIELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    LWQ++G WD +   M  +K   D +     F   P +      +    +KSYR+L
Sbjct: 74  VQPAELWQETGRWDVFGPQMLKIKDRHDNL-----FCFGPTHEEVITDIARREVKSYRQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI-HNLIISIYKD 417
           P+   +  + +R+E      G+MR R F   DA+ F +  +   +  ++ +     I+  
Sbjct: 129 PLNFYQIQTKFRDEVRPRF-GVMRAREFVMKDAYSFHSSFESLEQTYRVMYETYTRIFTR 187

Query: 418 FGFE 421
            G +
Sbjct: 188 LGLQ 191


>gi|51473574|ref|YP_067331.1| prolyl-tRNA synthetase [Rickettsia typhi str. Wilmington]
 gi|81826313|sp|Q68WZ3|SYP_RICTY RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|51459886|gb|AAU03849.1| Proline translase [Rickettsia typhi str. Wilmington]
          Length = 428

 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 75/176 (42%), Gaps = 8/176 (4%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  SG+  W   G K+ + + + +R  + K    E+  P +   HLW +SG ++ Y  
Sbjct: 32  IMKQASGLYTWLPLGLKVLKNIENIVRSNMNKVGALEVLMPCIQPAHLWIESGRFEYYGK 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M   +   D      T    P N      +F   +KSY++LP  L      +R+E    
Sbjct: 92  EMLKFQDRHDN-----TLLFGPTNEDMITDIFRRNIKSYKDLPKNLYHIQWKFRDEIRPR 146

Query: 377 LHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP 431
             G+MR R F   DA+ F   +E   N   K++   I+ ++D G   I V     P
Sbjct: 147 F-GVMRGREFLMKDAYSFDINQENAVNTYNKMYKAYINTFRDLGVFAIPVIADNGP 201


>gi|54293678|ref|YP_126093.1| prolyl-tRNA synthetase [Legionella pneumophila str. Lens]
 gi|81822437|sp|Q5WYK5|SYP_LEGPL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|53753510|emb|CAH14965.1| Prolyl-tRNA synthetase (Proline--tRNA ligase)(ProRS)(Global RNA
           synthesis factor) [Legionella pneumophila str. Lens]
          Length = 569

 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/170 (22%), Positives = 78/170 (45%), Gaps = 8/170 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
           GSG+  W   G ++ + + + +R ++   +  E+  P V    LWQ++G W+++   +  
Sbjct: 36  GSGLYTWMPLGLRVLRKVENIVREEMNKTHAMELLMPSVQPAELWQETGRWETFGGQLLT 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +K ++      R +   P +      +  + L+SY++LPV   +  + +R+E      G+
Sbjct: 96  MKDSNQ-----REYCFGPTHEEVITDIMRNELQSYKQLPVNFYQIQTKFRDEIRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDFGFEKIMVKLST 429
           MR R F   DA+ F    +   E  K ++     I+   G +   V+  T
Sbjct: 150 MRAREFIMKDAYSFHLSLESLQETYKDMYQAYCRIFDRMGLKYRAVEADT 199


>gi|254392125|ref|ZP_05007314.1| prolyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|294815425|ref|ZP_06774068.1| Prolyl-tRNA synthetase 1 [Streptomyces clavuligerus ATCC 27064]
 gi|326443777|ref|ZP_08218511.1| prolyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|197705801|gb|EDY51613.1| prolyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|294328024|gb|EFG09667.1| Prolyl-tRNA synthetase 1 [Streptomyces clavuligerus ATCC 27064]
          Length = 566

 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/192 (23%), Positives = 91/192 (47%), Gaps = 19/192 (9%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R     ++  + +G+  W   G K+ + +   +R ++     +E+  P 
Sbjct: 22  DAETLSHKLLVRA---GYVRRNAAGIWSWLPLGKKVLENVTRVVREEMDAIGAQEVLLPA 78

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L +  ++ +G WD Y A +F        +KD +    + +  P H  +F   +K    S
Sbjct: 79  LLPKEPYEITGRWDEYGAELF-------RLKDRK--GAEYLLGPTHEEIFTQLVKDQCSS 129

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH-NLIIS 413
           Y++LPV L +  + YR+E +    G++R R F   D++ F T ++   E   +H    I 
Sbjct: 130 YKDLPVILYQIQTKYRDE-ARPRSGILRGREFQMKDSYSFDTTDEGLAESYALHREAYIR 188

Query: 414 IYKDFGFEKIMV 425
           I++  G +  +V
Sbjct: 189 IFRRLGLDHRIV 200


>gi|161723258|ref|YP_094730.2| prolyl-tRNA synthetase [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
 gi|114152207|sp|Q5ZXN7|SYP_LEGPH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
          Length = 569

 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/170 (22%), Positives = 78/170 (45%), Gaps = 8/170 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
           GSG+  W   G ++ + + + +R ++   +  E+  P V    LWQ++G W+++   +  
Sbjct: 36  GSGLYTWMPLGLRVLRKVENIVREEMNKTHAMELLMPSVQPAELWQETGRWETFGGQLLT 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +K ++      R +   P +      +  + L+SY++LPV   +  + +R+E      G+
Sbjct: 96  MKDSNQ-----REYCFGPTHEEVITDIMRNELQSYKQLPVNFYQIQTKFRDEIRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDFGFEKIMVKLST 429
           MR R F   DA+ F    +   E  K ++     I+   G +   V+  T
Sbjct: 150 MRAREFIMKDAYSFHLSLESLQETYKDMYQAYCRIFDRMGLKYRAVEADT 199


>gi|58584338|ref|YP_197911.1| prolyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of Brugia
           malayi]
 gi|81311670|sp|Q5GTK5|SYP_WOLTR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|58418654|gb|AAW70669.1| Prolyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of Brugia
           malayi]
          Length = 425

 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 95/421 (22%), Positives = 165/421 (39%), Gaps = 73/421 (17%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  SG+  W   G ++ + +   +R ++ K    E   P V    LW++SG +D Y  
Sbjct: 32  IKQIASGIYTWLPLGLRVLKNIEGIIRDEMNKSGAIEALMPCVQPASLWRESGRYDDYGK 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  ++  D   +D+      P +      +    +KSY+ LP+ L +    +R+E    
Sbjct: 92  TMLRIR--DRHEEDM---LFGPTHEEVATDLIRDIVKSYKNLPLCLYQIQWKFRDEVR-P 145

Query: 377 LHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST------ 429
            +G+MR R F   DA+ F    E   N    ++   I I+K  G   I V+  T      
Sbjct: 146 RYGVMRGREFLMKDAYSFNVNYESALNSYNLMYKTYIKIFKRMGLIPIGVRADTGLIGGN 205

Query: 430 -----RPEKRVGSDALWDD--------AENI-----MKGVLDTIKNSS-----QDRINT- 465
                      G   L+ D        +E++     +  V D I +       Q+++N  
Sbjct: 206 LSHEFHILASTGESTLYYDNKFFELLESEDVKSLKSIYAVADDIHDPKTCPVPQEQLNVS 265

Query: 466 -GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIH 524
            G+ +G   ++G K+   +   +                           ++    V IH
Sbjct: 266 KGIEIGHIFYFGDKYSKPMNAKV--------------------------TAQDGKNVNIH 299

Query: 525 RAVFG-SIERFIGIMIENF---KG-NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH 579
              +G  + R +G +IE F   KG   P  ++P +  +  + +   EY  EIAN + S  
Sbjct: 300 MGSYGIGVSRLVGAIIEAFHDDKGITWPEAVAPFRVGLINLQTKTAEYV-EIANKIYSTL 358

Query: 580 LSIET--DFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
            S E   D    +I  K  +  +  +P  II G K  SE  I I+   +   ++V + +A
Sbjct: 359 KSDEVLYDDTEGSIGVKFAKMDLIGLPWQIIVGKKAVSENIIEIKNRATGKVEEVQIEEA 418

Query: 638 I 638
           I
Sbjct: 419 I 419


>gi|54296718|ref|YP_123087.1| prolyl-tRNA synthetase [Legionella pneumophila str. Paris]
 gi|81822631|sp|Q5X756|SYP_LEGPA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|53750503|emb|CAH11897.1| Prolyl-tRNA synthetase (Proline--tRNA ligase)(ProRS)(Global RNA
           synthesis factor) [Legionella pneumophila str. Paris]
          Length = 569

 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/170 (22%), Positives = 78/170 (45%), Gaps = 8/170 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
           GSG+  W   G ++ + + + +R ++   +  E+  P V    LWQ++G W+++   +  
Sbjct: 36  GSGLYTWMPLGLRVLRKVENIVREEMNKTHAMELLMPSVQPAELWQETGRWETFGGQLLT 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +K ++      R +   P +      +  + L+SY++LPV   +  + +R+E      G+
Sbjct: 96  MKDSNQ-----REYCFGPTHEEVITDIMRNELQSYKQLPVNFYQIQTKFRDEIRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDFGFEKIMVKLST 429
           MR R F   DA+ F    +   E  K ++     I+   G +   V+  T
Sbjct: 150 MRAREFIMKDAYSFHLSLESLQETYKDMYQAYCRIFDRMGLKYRAVEADT 199


>gi|303234780|ref|ZP_07321406.1| proline--tRNA ligase [Finegoldia magna BVS033A4]
 gi|302494121|gb|EFL53901.1| proline--tRNA ligase [Finegoldia magna BVS033A4]
          Length = 576

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 82/168 (48%), Gaps = 12/168 (7%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDY--EEINT 296
           +++E   H+ L R      I +  +G+  +   G++I + + + +R ++ D+Y  +EI+ 
Sbjct: 16  QDAEIASHKLLLRAG---MIRKTAAGLYSYLPLGYRIVRKVENIVREEM-DNYGSQEIHM 71

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P    + +W++SG W ++   MF +K  ++     R F L P        +    +KSY+
Sbjct: 72  PVTQPREIWEESGRWKTFGPEMFKLKDRNN-----REFCLGPTAEEYFTDLVKGEIKSYK 126

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           +LP+ + +  + YR+E      G+ R R F   DA+ F   E+   E 
Sbjct: 127 QLPLNIYQIQTKYRDEKRPRF-GINRSREFLMQDAYTFDVNEEAMGEA 173


>gi|52628042|gb|AAU26783.1| prolyl-tRNA synthase [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
          Length = 589

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/170 (22%), Positives = 78/170 (45%), Gaps = 8/170 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
           GSG+  W   G ++ + + + +R ++   +  E+  P V    LWQ++G W+++   +  
Sbjct: 56  GSGLYTWMPLGLRVLRKVENIVREEMNKTHAMELLMPSVQPAELWQETGRWETFGGQLLT 115

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +K ++      R +   P +      +  + L+SY++LPV   +  + +R+E      G+
Sbjct: 116 MKDSNQ-----REYCFGPTHEEVITDIMRNELQSYKQLPVNFYQIQTKFRDEIRPRF-GV 169

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDFGFEKIMVKLST 429
           MR R F   DA+ F    +   E  K ++     I+   G +   V+  T
Sbjct: 170 MRAREFIMKDAYSFHLSLESLQETYKDMYQAYCRIFDRMGLKYRAVEADT 219


>gi|282899245|ref|ZP_06307218.1| Prolyl-tRNA synthetase [Cylindrospermopsis raciborskii CS-505]
 gi|281195881|gb|EFA70805.1| Prolyl-tRNA synthetase [Cylindrospermopsis raciborskii CS-505]
          Length = 603

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 77/169 (45%), Gaps = 9/169 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           ++E   H+ L R     +I   GSGV  +    W++ Q +   +R ++     EE   PQ
Sbjct: 17  DAEIPSHKLLLRAG---YIRRIGSGVYAYLPLMWRVLQKISQIVREEMNATGAEECLLPQ 73

Query: 299 VLDQHLWQQSGHWDSY-RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           +    LW++SG WD+Y +A        D   + L    L P +      +    ++SYR+
Sbjct: 74  LQPAELWKESGRWDTYTKAEGIMFSLIDRREQHL---GLGPTHEEVITTIGRDMIRSYRQ 130

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           LPV L +  + +R+E      GLMR R F   D + F T E+   +  +
Sbjct: 131 LPVHLYQIQTKFRDEIRPRF-GLMRGREFIMKDGYSFHTDEESLKKTYQ 178


>gi|225849769|ref|YP_002730003.1| prolyl-tRNA synthetase [Persephonella marina EX-H1]
 gi|254782911|sp|C0QTI8|SYP_PERMH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|225645347|gb|ACO03533.1| prolyl-tRNA synthetase [Persephonella marina EX-H1]
          Length = 563

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/189 (24%), Positives = 90/189 (47%), Gaps = 11/189 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQ 298
           E+E   H  L R   +  +A   +G+  +   G+++ + +   +R+ + D    E+  P 
Sbjct: 17  EAEVPSHIYLIRAGFIRQLA---AGLYEYLPLGFRVLKKIEGIIRKYMDDAGALEVLLPI 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ++G WD Y   +F V+      +  R FAL P +      +    ++SY++L
Sbjct: 74  LAPAELWQETGRWDVYGKELFRVED-----RKGRFFALGPTHEETITDLVRKNIRSYKDL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI-HNLIISIYKD 417
           P    +  + +R+E +   +GL+R R F   DA+ F   E+M  +  +I       I+ +
Sbjct: 129 PKNFYQIQTKFRDE-ARPRYGLIRGREFIMKDAYSFDISEEMAVKSYEIMKEAYKKIFDE 187

Query: 418 FGFEKIMVK 426
            G + +MV+
Sbjct: 188 LGLDYLMVE 196


>gi|1653092|dbj|BAA18008.1| proline-tRNA ligase [Synechocystis sp. PCC 6803]
          Length = 617

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 72/141 (51%), Gaps = 10/141 (7%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRAN--- 317
           GSG+  +    W++ + +   ++ ++ +   +E   PQ+    LW+ SG WD+Y  +   
Sbjct: 50  GSGLYAYLPLIWRVLEKVKRIVQEEMNRTGAQECLLPQLQPSELWKMSGRWDTYTESEGI 109

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           MFA++   D ++  R   L P +     A+    ++SYR+LPV L +  + +R+E     
Sbjct: 110 MFALR---DRLE--RELGLGPTHEEVITAIAKEMIRSYRQLPVNLYQIQTKFRDEIRPRF 164

Query: 378 HGLMRVRGFTQDDAHVFCTKE 398
            GLMR R F   DA+ F + E
Sbjct: 165 -GLMRGREFIMKDAYSFHSDE 184


>gi|301155393|emb|CBW14859.1| prolyl-tRNA synthetase [Haemophilus parainfluenzae T3T1]
          Length = 571

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 62/134 (46%), Gaps = 7/134 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   GW++ + +   +R ++ K    EI  P V    LW++SG W+ Y   +  
Sbjct: 36  ASGLYNWMPTGWRVLRKVEKIIREEMDKSGALEIKMPVVQPAELWEESGRWEQYGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +   +     R F L P +      +    + SYR+LP+ L +  + +R+E      G+
Sbjct: 96  FEDRGN-----RHFVLGPTHEEVITDLVRREVSSYRQLPINLYQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVF 394
           MR R F   DA+ F
Sbjct: 150 MRSREFIMKDAYSF 163


>gi|307718879|ref|YP_003874411.1| hypothetical protein STHERM_c11970 [Spirochaeta thermophila DSM
           6192]
 gi|306532604|gb|ADN02138.1| hypothetical protein STHERM_c11970 [Spirochaeta thermophila DSM
           6192]
          Length = 552

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/197 (22%), Positives = 96/197 (48%), Gaps = 8/197 (4%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAK-KAVAVAINGKVCDLSDPVR-EGSIE 60
           ++I++  P+G +   P    G+ V + +   L     VA  +N ++   +  +    SIE
Sbjct: 6   NEIRVMLPNGHVLEVPY---GTRVGDLLKAHLPDIHPVAARVNNELTSFTYKLEFNSSIE 62

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            +T + P  + + R S   ++A A       +++ IG  + DG++Y     +  +  E+ 
Sbjct: 63  PVTFDQPEGMIIYRASLCFLLAMAAHRRG--LRLIIGHSLGDGYFYTLRDREDVTPREVD 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            ++++MQ++I RD P  ++ LS++ A   F+ + +   V++L +   +  + ++    + 
Sbjct: 121 LLQEEMQDLIRRDIPIQRKVLSYQDAIWEFQGRDQMQTVKLL-TFRNENKIPVFFCDTYC 179

Query: 181 DLCRGPHVRSTGQVKKF 197
           DL   P V  TG +K F
Sbjct: 180 DLATIPLVPRTGLLKGF 196


>gi|284161870|ref|YP_003400493.1| prolyl-tRNA synthetase [Archaeoglobus profundus DSM 5631]
 gi|284011867|gb|ADB57820.1| prolyl-tRNA synthetase [Archaeoglobus profundus DSM 5631]
          Length = 476

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 81/382 (21%), Positives = 159/382 (41%), Gaps = 59/382 (15%)

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVL-DQHL 304
           + ++ ++ ++  I     G+  W   G+KI Q + + +R  +  D++E+  P ++ +  L
Sbjct: 18  YHEVIQQAEIMDIRYPVKGLYVWLPFGFKIRQLVYAKLRELLDRDHQEVYFPTLIPEDML 77

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
            ++S H   +   ++ V        D++  AL+P +      +F   ++S+ +LP+++ +
Sbjct: 78  MKESKHIKGFEDEVYWVTHGGLEPLDVK-LALRPTSETAMYPMFKLWIRSHADLPLKVYQ 136

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQ-DDAHVFCTKEQMFNECLKIHNLIISIYKDF-GFEK 422
             +V+R E   +   L+R+R  T   +AH   T  + + E  +     + +YK+F  F  
Sbjct: 137 IVNVFRYETKHT-RPLIRLREVTSFKEAH---TVHRTYEEAEEQVRQAVKLYKEFYDFLA 192

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I   +  RPE        WD                             GA Y    + I
Sbjct: 193 IPYLVFRRPE--------WDKF--------------------------PGADYTIALDTI 218

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRF-NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI-- 539
           + D  GR  Q GT+    NL   F   F +   + +      H+  +G  ER I  +I  
Sbjct: 219 MPD--GRTLQIGTVH---NLADNFARTFEIKYETPEGDHAYAHQTCYGISERCIASLISI 273

Query: 540 --ENFKGNLPLWLSPIQAIVTTIT-----SSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
             ++    LP  ++P+Q ++  I         +E ++++   LK   + +  D  +E   
Sbjct: 274 HGDDLGLVLPFEVAPVQIVIIPILYKGKEEKVMELSRKLYERLKCFRVVL--DDSDERPG 331

Query: 593 YKIREHSIKKIPIIIICGDKEA 614
            K  +  +K +PI    G +EA
Sbjct: 332 AKYYKWELKGVPIRFEIGPREA 353


>gi|315187159|gb|EFU20916.1| TGS domain-containing protein [Spirochaeta thermophila DSM 6578]
          Length = 548

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/197 (22%), Positives = 96/197 (48%), Gaps = 8/197 (4%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAK-KAVAVAINGKVCDLSDPVR-EGSIE 60
           ++I++  P+G +   P    G+ V + +   L     VA  +N ++  L+  +    SIE
Sbjct: 2   NEIRVMLPNGHVLEVPY---GTRVGDLLKTHLPDIHPVAARVNNELTSLTYKLEFNSSIE 58

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            +T + P  + + R S   ++A A       +++ IG  + DG++Y     +  +  E+A
Sbjct: 59  PVTFDQPEGMIIYRASLCFLLAMAAHRRG--LRLIIGHSLGDGYFYTLRDREDVTPREVA 116

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            ++++MQ++I  D P  ++ LS++ A   F+ + +   V++L +   +  + ++    + 
Sbjct: 117 LLQEEMQDLIRSDIPIQRKVLSYQDAIWEFQGRDQMQTVKLL-TFKNENKIPVFFCDTYC 175

Query: 181 DLCRGPHVRSTGQVKKF 197
           DL   P V  TG +  F
Sbjct: 176 DLATIPLVPRTGLLNGF 192


>gi|116251485|ref|YP_767323.1| prolyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae 3841]
 gi|114152239|sp|Q1MIJ6|SYP_RHIL3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|115256133|emb|CAK07214.1| putative prolyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 440

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/195 (25%), Positives = 83/195 (42%), Gaps = 11/195 (5%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTP 297
           +E+E   HR + R      I +   G+  W   G ++   + + +R  + +    E++ P
Sbjct: 16  KEAEIVSHRLMLRAG---MIRQQSQGIYSWLPLGKRVLDKVNAIIRDEQNRAGAIELSMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LWQ+SG +D+Y   M  +K   D     R     P N      +F   +KSY++
Sbjct: 73  TLQSAELWQESGRYDAYGKEMLRIKDRQD-----RPMLYGPTNEEMVTDIFRSSVKSYKD 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYK 416
           LP+ L      +R+E      G MR R F   DA+ F  T+E   +   K+    +  + 
Sbjct: 128 LPLNLYHIQLKFRDEIRPRF-GTMRSREFMMKDAYSFDLTREAAEHSYNKMFAAYLRTFD 186

Query: 417 DFGFEKIMVKLSTRP 431
             G   I ++  T P
Sbjct: 187 RLGLRAIPMRADTGP 201


>gi|262044730|ref|ZP_06017778.1| proline-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
 gi|259037920|gb|EEW39143.1| proline-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
          Length = 572

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 76/166 (45%), Gaps = 10/166 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQ 298
           +SE   H+ + R   +  +A   SG+  W   G ++ + + + +R ++ +    E+  P 
Sbjct: 17  DSEVISHQLMLRAGMIRKLA---SGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVLMPV 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    LWQ+SG W+ Y   +  +    D     R F L P +      +  + L SY++L
Sbjct: 74  VQPSELWQESGRWEQYGPELLRIADRGD-----RPFVLGPTHEEVITDLIRNELNSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           P+   +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 129 PLNFYQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHTSQESLQET 173


>gi|312863998|ref|ZP_07724234.1| proline--tRNA ligase [Streptococcus vestibularis F0396]
 gi|322517545|ref|ZP_08070414.1| proline--tRNA ligase [Streptococcus vestibularis ATCC 49124]
 gi|311100411|gb|EFQ58618.1| proline--tRNA ligase [Streptococcus vestibularis F0396]
 gi|322123805|gb|EFX95379.1| proline--tRNA ligase [Streptococcus vestibularis ATCC 49124]
          Length = 620

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  +++ +K      +D   F L P +     A+    +
Sbjct: 68  EMLAPALLTADLWRESGRYETYGEDLYKLKN-----RDKSDFILGPTHEETFTALVRDAV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +  S YR+E     +GL+R R F   DA+ F
Sbjct: 123 KSYKQLPLNLYQIQSKYRDEKR-PRNGLLRTREFIMKDAYSF 163


>gi|169823842|ref|YP_001691453.1| prolyl-tRNA synthetase [Finegoldia magna ATCC 29328]
 gi|226701290|sp|B0RZJ0|SYP_FINM2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|167830647|dbj|BAG07563.1| prolyl-tRNA synthetase [Finegoldia magna ATCC 29328]
          Length = 576

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 82/168 (48%), Gaps = 12/168 (7%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDY--EEINT 296
           +++E   H+ L R      I +  +G+  +   G++I + + + +R ++ D+Y  +EI+ 
Sbjct: 16  QDAEIASHKLLLRAG---MIRKTAAGLYSYLPLGYRIVRKVENIVREEM-DNYGSQEIHM 71

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P    + +W++SG W ++   MF +K  ++     R F L P        +    +KSY+
Sbjct: 72  PITQPREIWEESGRWKTFGPEMFKLKDRNN-----REFCLGPTAEEYFTDLVKGEIKSYK 126

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           +LP+ + +  + YR+E      G+ R R F   DA+ F   E+   E 
Sbjct: 127 QLPLNIYQIQTKYRDEKRPRF-GINRSREFLMQDAYTFDVNEEAMGEA 173


>gi|241204106|ref|YP_002975202.1| prolyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240857996|gb|ACS55663.1| prolyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 440

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/195 (25%), Positives = 83/195 (42%), Gaps = 11/195 (5%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTP 297
           +E+E   HR + R      I +   G+  W   G ++   + + +R  + +    E++ P
Sbjct: 16  KEAEIVSHRLMLRAG---MIRQQSQGIYSWLPLGKRVLDKVNAIIRDEQNRAGAIELSMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LWQ+SG +D+Y   M  +K   D     R     P N      +F   +KSY++
Sbjct: 73  TLQSAELWQESGRYDAYGKEMLRIKDRQD-----RPMLYGPTNEEMVTDIFRSSVKSYKD 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYK 416
           LP+ L      +R+E      G MR R F   DA+ F  T+E   +   K+    +  + 
Sbjct: 128 LPLNLYHIQLKFRDEIRPRF-GTMRSREFMMKDAYSFDLTREGAEHSYNKMFAAYLRTFD 186

Query: 417 DFGFEKIMVKLSTRP 431
             G   I ++  T P
Sbjct: 187 RLGLRAIPMRADTGP 201


>gi|148360654|ref|YP_001251861.1| prolyl-tRNA synthase [Legionella pneumophila str. Corby]
 gi|296106282|ref|YP_003617982.1| prolyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
 gi|166980133|sp|A5IGL5|SYP_LEGPC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|148282427|gb|ABQ56515.1| prolyl-tRNA synthase [Legionella pneumophila str. Corby]
 gi|295648183|gb|ADG24030.1| prolyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
          Length = 569

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/170 (22%), Positives = 78/170 (45%), Gaps = 8/170 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
           GSG+  W   G ++ + + + +R ++   +  E+  P V    LWQ++G W+++   +  
Sbjct: 36  GSGLYTWMPLGLRVLRKVENIVREEMNKTHAMELLMPSVQPAELWQETGRWETFGGQLLT 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +K ++      R +   P +      +  + L+SY++LPV   +  + +R+E      G+
Sbjct: 96  MKDSNQ-----REYCFGPTHEEVITDIMRNELQSYKQLPVNFYQIQTKFRDEIRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDFGFEKIMVKLST 429
           MR R F   DA+ F    +   E  K ++     I+   G +   V+  T
Sbjct: 150 MRAREFIMKDAYSFHLSIESLQETYKDMYQAYCRIFDRMGLKYRAVEADT 199


>gi|126459705|ref|YP_001055983.1| prolyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
 gi|166980146|sp|A3MV50|SYP_PYRCJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|126249426|gb|ABO08517.1| prolyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
          Length = 487

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 89/419 (21%), Positives = 169/419 (40%), Gaps = 73/419 (17%)

Query: 249 LAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD--YEEINTPQVLDQHLW- 305
           L RE +++ +     G   W   G KI + + + +RR + D+  +EE+  P  +    + 
Sbjct: 26  LLREAEIYDVRYPVKGAYVWRPYGMKIRRNVEALIRR-LHDETGHEEVLFPVFIPYEFFG 84

Query: 306 QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEF 365
           ++S H   +   +F V    +  + L    L+P +    + +    ++ Y++LP+RL + 
Sbjct: 85  KESEHIRGFEKEVFWVSKGGEGGERL---VLRPTSETAIMPMVKLWVQDYKDLPLRLYQI 141

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQ-DDAHVFCT----KEQMFNECLKIHNLIISIYKDFGF 420
            SV+R E   + H ++R+R  +   +AH         E+   E ++I+  I      F  
Sbjct: 142 VSVFRAETKMT-HPMIRLREISMFKEAHTVHVDREDAERQVREAVEIYKRI------FDE 194

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
             +   ++ RP+        WD                             GA Y   F+
Sbjct: 195 MCLAYMINRRPD--------WDKF--------------------------AGAVYTIAFD 220

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFN-AFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
            +L D  GR  Q GT+     L ++F   F V   +      + H   +G  ER I  M+
Sbjct: 221 TVLPD--GRALQIGTVH---YLGTKFTEVFEVTYLAPDGSRRLAHTTSYGISERSIAAML 275

Query: 540 ----ENFKGNLPLWLSPIQAIVTTI------TSSAVEYAQEIANLLKSHHLSIETDFRNE 589
               ++    +P  L+PIQ +V  I          +  A++ A  L+     +  D R++
Sbjct: 276 ITHGDDAGTVIPPKLAPIQVVVVPIFYGEEEKGVVMPAAEQAAKALREAGFRVHVDGRDD 335

Query: 590 -TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS---LLDAIPILTKE 644
            T  +K     ++ +P+ +  G ++   R + + R  +     V+   L+DA+  L  E
Sbjct: 336 KTPGWKFYYWELRGVPLRVEVGKRDVEGRQVVVARRDTLAKYAVAVDELVDAVKALLSE 394


>gi|113955222|ref|YP_731224.1| prolyl-tRNA synthetase [Synechococcus sp. CC9311]
 gi|123031649|sp|Q0I8J8|SYP_SYNS3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|113882573|gb|ABI47531.1| prolyl-tRNA synthetase [Synechococcus sp. CC9311]
          Length = 598

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 73/155 (47%), Gaps = 8/155 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           GSG+  +    W++ Q ++  +R ++      E   PQ+    LW++SG W  Y A    
Sbjct: 36  GSGIYAYLPLMWRVLQRVMRIVREEMNQIGALETLLPQLQPAELWEKSGRWQGYTAGEGI 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +   +D  +  R+  L P +      + +  L+SYR+LPV L +  S +R+E      GL
Sbjct: 96  MFHLED--RQERSLGLGPTHEEVITELASDLLRSYRQLPVTLYQIQSKFRDEIRPRF-GL 152

Query: 381 MRVRGFTQDDAHVFCTKE----QMFNECLKIHNLI 411
           MR R F   DA+ F   E    +M+ E  K +  +
Sbjct: 153 MRGREFIMKDAYSFHGDEGDLARMYEEMEKAYTRV 187


>gi|312143861|ref|YP_003995307.1| AAA ATPase [Halanaerobium sp. 'sapolanicus']
 gi|311904512|gb|ADQ14953.1| AAA ATPase [Halanaerobium sp. 'sapolanicus']
          Length = 549

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 86/172 (50%), Gaps = 4/172 (2%)

Query: 36  KKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           K  +AV I  ++ DL+  + +E  I+ +T        + R S   ++A+AV  I+PE+ +
Sbjct: 31  KDIMAVIIENEIYDLNHKIEKEVEIKTVTINTEIGNRIYRRSLYFVLAKAVYEIFPEIVL 90

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            IG  I +G Y +   +   S  ++ +I  KM EII+ D    +  LS ++  ++ E + 
Sbjct: 91  KIGISISNGIYCELKNKSCLSKADINKINSKMLEIISADLKIKRHKLSQKEVLKIIEEEN 150

Query: 155 EAYKVE-ILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAG 205
            +++ E ILE    K+  T+Y    ++D      V ST  + +F   +++ G
Sbjct: 151 CSFRRELILEQ--DKDFYTIYELDGYYDYFYYNMVPSTSYLSEFDLHLRIPG 200


>gi|313609001|gb|EFR84741.1| prolyl-tRNA synthetase [Listeria monocytogenes FSL F2-208]
          Length = 344

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 75/169 (44%), Gaps = 16/169 (9%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKI----KDDYEEINTPQVL-----DQHLWQQSGHWDS 313
           +G I     G   +  L + M RKI    +++ E I   ++L        LWQ+SG W+ 
Sbjct: 29  AGFIRQTASGIYSYLPLATLMLRKIETIIREELEAIGAAELLMPALQPAELWQESGRWND 88

Query: 314 YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP 373
           Y   +  +K      +  R FAL P +     A+    +KSY+ LP+ L +  + +R+E 
Sbjct: 89  YGPELMRLKD-----RASRDFALGPTHEEVITALLRDEVKSYKRLPLTLYQIQTKFRDEK 143

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI-HNLIISIYKDFGFE 421
                GL+R R F   DA+ F    +  +E   + H    +I+   G E
Sbjct: 144 RPRF-GLLRGREFIMKDAYSFHATSESLDEVYNLMHQAYSNIFTRCGLE 191


>gi|242373554|ref|ZP_04819128.1| prolyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
 gi|242348917|gb|EES40519.1| prolyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
          Length = 567

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 83/183 (45%), Gaps = 11/183 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E   HR L   +    I +  SG+  +     ++   +   +R +++  D  EI  P 
Sbjct: 17  EAEALSHRLL---LKAGLIKQSTSGIYSYLPLATRVLNNISKIVREEMESIDAVEILMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW++SG W +Y   +  +K      ++ R FAL P +     ++    LKSY+ L
Sbjct: 74  LQQAELWEESGRWGAYGPELMRLKD-----RNGREFALGPTHEEVVTSLVRDELKSYKRL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKD 417
           P+ L +  S +R+E      GL+R R F   DA+ F   E   +   + ++N    I+K 
Sbjct: 129 PLTLFQIQSKFRDEKRPRF-GLLRGREFIMKDAYSFHADEASLDATYQDMYNAYSRIFKR 187

Query: 418 FGF 420
            G 
Sbjct: 188 VGI 190


>gi|87123890|ref|ZP_01079740.1| tRNA synthetases, class-II (G, H, P and S):Prolyl-tRNA synthetase
           [Synechococcus sp. RS9917]
 gi|86168459|gb|EAQ69716.1| tRNA synthetases, class-II (G, H, P and S):Prolyl-tRNA synthetase
           [Synechococcus sp. RS9917]
          Length = 594

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/167 (26%), Positives = 73/167 (43%), Gaps = 5/167 (2%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           GSG+  +    W++ Q + + +R ++      E   PQ+    LW++SG W  Y A    
Sbjct: 36  GSGIYAYLPLMWRVLQRINAIVREEMNALGALETLLPQLQPAELWERSGRWQGYTAGEGI 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +   DD  +  R   L P +     ++    L+SYR+LPV L +  S +R+E      GL
Sbjct: 96  MFHLDD--RQGRQLGLGPTHEEVITSLAGELLRSYRQLPVTLYQIQSKFRDEIRPRF-GL 152

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFEKIMVK 426
           MR R F   DA+ F         C   +      I+   G + + V+
Sbjct: 153 MRGREFIMKDAYSFHADASDLQACYGAMDGAYRRIFDRCGLQTVAVE 199


>gi|332881459|ref|ZP_08449108.1| phosphoribulokinase/uridine kinase family protein [Capnocytophaga
           sp. oral taxon 329 str. F0087]
 gi|332680457|gb|EGJ53405.1| phosphoribulokinase/uridine kinase family protein [Capnocytophaga
           sp. oral taxon 329 str. F0087]
          Length = 553

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/183 (24%), Positives = 81/183 (44%), Gaps = 2/183 (1%)

Query: 16  NFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIR 74
             P+ +T  D   +++  +    V+  +N KV  L      +  +E +       +    
Sbjct: 17  QLPIGSTLWDAYHALNLQMPYGPVSAKVNNKVEGLHYRFYNDKDVEFLDVTSSSGMRTYT 76

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDS 134
            S   ++ +AV+ ++PE  + I   +  G+Y D    +P   D++  I ++M+EI+  D 
Sbjct: 77  RSLFFVLVKAVKDLFPECVLRIETPVSRGYYCDLRIGRPIEEDDVTAIWRRMREIVDADI 136

Query: 135 PFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQV 194
           PF +     E A E+F  +    KV +LES  A      Y+  +  D   G  + STG +
Sbjct: 137 PFHRIQSPTEDAIEMFRRQGMTSKVRLLESYGAI-YTHYYQLDQTVDYFYGSLLTSTGGL 195

Query: 195 KKF 197
           K F
Sbjct: 196 KVF 198


>gi|228476457|ref|ZP_04061147.1| prolyl-tRNA synthetase [Streptococcus salivarius SK126]
 gi|228251878|gb|EEK10924.1| prolyl-tRNA synthetase [Streptococcus salivarius SK126]
          Length = 621

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  +++ +K      +D   F L P +     A+    +
Sbjct: 69  EMLAPALLTADLWRESGRYETYGEDLYKLKN-----RDKSDFILGPTHEETFTALVRDAV 123

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +  S YR+E     +GL+R R F   DA+ F
Sbjct: 124 KSYKQLPLNLYQIQSKYRDEKR-PRNGLLRTREFIMKDAYSF 164


>gi|300309711|ref|YP_003773803.1| prolyl-tRNA synthetase [Herbaspirillum seropedicae SmR1]
 gi|300072496|gb|ADJ61895.1| prolyl-tRNA synthetase [Herbaspirillum seropedicae SmR1]
          Length = 575

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 77/162 (47%), Gaps = 8/162 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           G+G+  +   G ++ + + + +R ++ +    E+  P V    LWQ++G W+   A +  
Sbjct: 36  GAGIYTYMPMGLRVIRKVEAIVREEMNRAGAVELLMPVVQPAELWQETGRWNKMGAELMR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           VK      +  R FA++P +      V    L+SY++LPV      + +R+E      GL
Sbjct: 96  VKD-----RHGRDFAIQPTSEEVVTDVARSELRSYKQLPVNFYHIQTKFRDERRPRF-GL 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDFGFE 421
           MR R FT  DA+ F        +  + +++  + I+  FG E
Sbjct: 150 MRGREFTMKDAYSFDRDVDGLKKSYQAMYDAYVRIFTRFGLE 191


>gi|332798798|ref|YP_004460297.1| phosphoribulokinase/uridine kinase [Tepidanaerobacter sp. Re1]
 gi|332696533|gb|AEE90990.1| phosphoribulokinase/uridine kinase [Tepidanaerobacter sp. Re1]
          Length = 550

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/177 (24%), Positives = 84/177 (47%), Gaps = 3/177 (1%)

Query: 25  DVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIRHSCAHIMAE 83
           ++AE    +     +A  ++G + +L+  + ++  +E I       + +   S   +  +
Sbjct: 21  EIAEDYQHNFNSPIIAAIVDGNLRELTYVLDKDCEVEFIDMSTETGMKIYLRSLIFLFVK 80

Query: 84  AVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSH 143
           A   I P  QV +   + DG Y +   E+P   +E+A +E +M++++ +D P  K  +  
Sbjct: 81  ACHDIIPNCQVRVEHSLGDGLYSEVMAEEPIDEEEVAAVENRMRQLVEKDVPIKKNKIPI 140

Query: 144 EKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKL 200
           E A ++FE      KV +L+    +E + +Y      +   G  V STG + K+FKL
Sbjct: 141 EDALDMFEKAGMQDKVRLLKY-RKEEYINIYELDGMKNYFYGYMVPSTGYL-KWFKL 195


>gi|329996732|ref|ZP_08302530.1| proline--tRNA ligase [Klebsiella sp. MS 92-3]
 gi|328539331|gb|EGF65355.1| proline--tRNA ligase [Klebsiella sp. MS 92-3]
          Length = 572

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 66/144 (45%), Gaps = 7/144 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E+  P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVLMPVVQPSELWQESGRWEQYGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +    D     R F L P +      +  + L SY++LP+   +  + +R+E      G+
Sbjct: 96  IADRGD-----RPFVLGPTHEEVITDLIRNELNSYKQLPLNFYQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNEC 404
           MR R F   DA+ F T ++   E 
Sbjct: 150 MRSREFLMKDAYSFHTSQESLQET 173


>gi|312898748|ref|ZP_07758137.1| prolyl-tRNA synthetase [Megasphaera micronuciformis F0359]
 gi|310620179|gb|EFQ03750.1| prolyl-tRNA synthetase [Megasphaera micronuciformis F0359]
          Length = 574

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 80/166 (48%), Gaps = 8/166 (4%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           + ++ +G+  +   G K+   + + +R+++ +   +E+  P V    +W+++G WD Y  
Sbjct: 32  LRKNAAGLYSFLPLGRKVCLKVENIIRKEMNRSGAQEVMMPIVQPAEIWRETGRWDVYGP 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            MF +K   D       + L P +      +  + L+SY++LPV L +  + YR+E    
Sbjct: 92  EMFKLKDRHDN-----EYCLGPTHEELITTLVRNELRSYKQLPVNLWQMQNKYRDEIRPR 146

Query: 377 LHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFE 421
             GLMR R F   DA+ F   +E M      +++    I+ + G E
Sbjct: 147 F-GLMRSREFVMKDAYSFDVDREGMIKSYESMYDAYSRIFTECGIE 191


>gi|238893191|ref|YP_002917925.1| prolyl-tRNA synthetase [Klebsiella pneumoniae NTUH-K2044]
 gi|238545507|dbj|BAH61858.1| prolyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
          Length = 572

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 66/144 (45%), Gaps = 7/144 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E+  P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVLMPVVQPSELWQESGRWEQYGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +    D     R F L P +      +  + L SY++LP+   +  + +R+E      G+
Sbjct: 96  IADRGD-----RPFVLGPTHEEVITDLIRNELNSYKQLPLNFYQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNEC 404
           MR R F   DA+ F T ++   E 
Sbjct: 150 MRSREFLMKDAYSFHTSQESLQET 173


>gi|152968789|ref|YP_001333898.1| prolyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
 gi|166980131|sp|A6T4Z7|SYP_KLEP7 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|150953638|gb|ABR75668.1| prolyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
          Length = 572

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 66/144 (45%), Gaps = 7/144 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E+  P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVLMPVVQPSELWQESGRWEQYGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +    D     R F L P +      +  + L SY++LP+   +  + +R+E      G+
Sbjct: 96  IADRGD-----RPFVLGPTHEEVITDLIRNELNSYKQLPLNFYQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNEC 404
           MR R F   DA+ F T ++   E 
Sbjct: 150 MRSREFLMKDAYSFHTSQESLQET 173


>gi|330508032|ref|YP_004384460.1| prolyl-tRNA synthetase [Methanosaeta concilii GP-6]
 gi|328928840|gb|AEB68642.1| prolyl-tRNA synthetase [Methanosaeta concilii GP-6]
          Length = 487

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 74/373 (19%), Positives = 157/373 (42%), Gaps = 58/373 (15%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVL-DQHLWQQSGHWDSYRANMFAVK 322
           G+  W   G+ I + +   +R+ +  D++E   P ++ +    +++ H   +   ++ V 
Sbjct: 49  GMCVWFPFGFAIKKNVYGIIRQLLDPDHQETLFPLMIPENEFMKEAQHIKGFEEEVYWVT 108

Query: 323 CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMR 382
           C   T  +++  AL+P +      +F   ++S+ ++P+R+ +  + +R E +     L+R
Sbjct: 109 CGGTTPLEVK-LALRPTSETAIYPMFKLWIRSHADMPLRIYQIVNTFRYE-TKHTRPLIR 166

Query: 383 VRGFTQ-DDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK--LSTRPEKRVGSDA 439
           +R  T   +AH   T    + E  +   + I  Y +F + ++ +   +S RP        
Sbjct: 167 LREITSFKEAH---TVHATWEEAAEQVEVAIKRYSEF-YRRLAIPFLVSRRPS------- 215

Query: 440 LWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVD 499
            WD                             GA Y    + I+ D  G+  Q GT    
Sbjct: 216 -WDKF--------------------------PGADYTTAIDVIMPD--GKTLQVGTAH-- 244

Query: 500 FNLPSRFNAFY-VNSHSEKCHPVMIHRAVFGSIERFIGIMIE---NFKG-NLPLWLSPIQ 554
            +L S F   Y +   +E     ++++  +G  ER I  +I    + KG  LP  ++P+Q
Sbjct: 245 -HLGSTFAKTYEITYEAEDGEQKLVNQTCYGISERCIAALISVHGDDKGLALPWEVAPVQ 303

Query: 555 AIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
            ++  I        +E  +++  +L+   + +E D  +E    K  +  +K +PI +  G
Sbjct: 304 VVIVPILLGDKEKVLEVCRDLLRILQQAGIRVELDTSDERPGAKFYKWEMKGVPIRLEVG 363

Query: 611 DKEASERSIGIRR 623
            ++  +  + + R
Sbjct: 364 PRDIEKGVVTVVR 376


>gi|323964912|gb|EGB60378.1| prolyl-tRNA synthetase [Escherichia coli M863]
 gi|327255174|gb|EGE66777.1| prolyl-tRNA synthetase [Escherichia coli STEC_7v]
          Length = 572

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 66/144 (45%), Gaps = 7/144 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E+  P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVLMPVVQPSELWQESGRWEQYGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +    D     R F L P +      +  + L SY++LP+   +  + +R+E      G+
Sbjct: 96  IADRGD-----RPFVLGPTHEEVITDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNEC 404
           MR R F   DA+ F T ++   E 
Sbjct: 150 MRSREFLMKDAYSFHTSQESLQET 173


>gi|320547753|ref|ZP_08042037.1| proline--tRNA ligase [Streptococcus equinus ATCC 9812]
 gi|320447513|gb|EFW88272.1| proline--tRNA ligase [Streptococcus equinus ATCC 9812]
          Length = 618

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 67/130 (51%), Gaps = 11/130 (8%)

Query: 280 ISYMRRKIKDDYEEINT-----PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           I   ++ +++++E+I       P +L+  LW++SG +++Y  +++ +K      +D   F
Sbjct: 50  IEKFKKIMREEFEKIGAVEMLAPALLNADLWRESGRYETYGEDLYKLKN-----RDKSDF 104

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
            L P +     ++    +KSY++LP+ L +  S YR+E     +GL+R R F   D + F
Sbjct: 105 ILGPTHEETFTSLIRDAVKSYKQLPLNLYQIQSKYRDEKR-PRNGLLRTREFIMKDGYSF 163

Query: 395 CTKEQMFNEC 404
               +  +E 
Sbjct: 164 HADYEGLDET 173


>gi|311694949|gb|ADP97822.1| prolyl-tRNA synthetase [marine bacterium HP15]
          Length = 577

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/161 (24%), Positives = 71/161 (44%), Gaps = 8/161 (4%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           +G+  W   G +  + +   +R ++ K   +E+  P V    LW++SG W  Y   +  +
Sbjct: 37  AGLYTWLPMGLRTLRKVERIVREEMDKSGAQEVLMPAVQPAELWEESGRWTQYGGELLRM 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           K      +  R F   P +      +  + + SY+ELP    +  + +R+E      G+M
Sbjct: 97  KD-----RHGRDFCFGPTHEEVITDLIRNEISSYKELPANFYQVQTKFRDERRPRF-GVM 150

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLKI-HNLIISIYKDFGFE 421
           R R F   DA+ F    +  NE  ++ H    +I+  FG +
Sbjct: 151 RAREFLMKDAYSFHLNAESLNETYELMHRTYCAIFDRFGLD 191


>gi|206579512|ref|YP_002240318.1| prolyl-tRNA synthetase [Klebsiella pneumoniae 342]
 gi|226701300|sp|B5Y1H7|SYP_KLEP3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|206568570|gb|ACI10346.1| prolyl-tRNA synthetase [Klebsiella pneumoniae 342]
          Length = 572

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 66/144 (45%), Gaps = 7/144 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E+  P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVLMPVVQPSELWQESGRWEQYGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +    D     R F L P +      +  + L SY++LP+   +  + +R+E      G+
Sbjct: 96  IADRGD-----RPFVLGPTHEEVITDLIRNELNSYKQLPLNFYQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNEC 404
           MR R F   DA+ F T ++   E 
Sbjct: 150 MRSREFLMKDAYSFHTSQESLQET 173


>gi|110640415|ref|YP_668143.1| prolyl-tRNA synthetase [Escherichia coli 536]
 gi|117622479|ref|YP_851392.1| prolyl-tRNA synthetase [Escherichia coli APEC O1]
 gi|161486316|ref|NP_752183.2| prolyl-tRNA synthetase [Escherichia coli CFT073]
 gi|162138494|ref|YP_539251.2| prolyl-tRNA synthetase [Escherichia coli UTI89]
 gi|170680577|ref|YP_001742323.1| prolyl-tRNA synthetase [Escherichia coli SMS-3-5]
 gi|191171415|ref|ZP_03032964.1| prolyl-tRNA synthetase [Escherichia coli F11]
 gi|215485356|ref|YP_002327787.1| prolyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69]
 gi|218557136|ref|YP_002390049.1| prolyl-tRNA synthetase [Escherichia coli S88]
 gi|218688070|ref|YP_002396282.1| prolyl-tRNA synthetase [Escherichia coli ED1a]
 gi|227884892|ref|ZP_04002697.1| proline--tRNA ligase [Escherichia coli 83972]
 gi|300977725|ref|ZP_07174019.1| prolyl-tRNA synthetase [Escherichia coli MS 45-1]
 gi|300990442|ref|ZP_07179210.1| prolyl-tRNA synthetase [Escherichia coli MS 200-1]
 gi|301046653|ref|ZP_07193784.1| prolyl-tRNA synthetase [Escherichia coli MS 185-1]
 gi|331661266|ref|ZP_08362198.1| proline--tRNA ligase [Escherichia coli TA206]
 gi|331681580|ref|ZP_08382217.1| proline--tRNA ligase [Escherichia coli H299]
 gi|114152192|sp|Q8FKZ4|SYP_ECOL6 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|114152193|sp|Q1RFZ4|SYP_ECOUT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|123148404|sp|Q0TLD7|SYP_ECOL5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|152112309|sp|A1A7N8|SYP_ECOK1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226699141|sp|B7MBH6|SYP_ECO45 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226701285|sp|B1LGZ7|SYP_ECOSM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|254782899|sp|B7UJ96|SYP_ECO27 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|254782901|sp|B7MP55|SYP_ECO81 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|110342007|gb|ABG68244.1| prolyl-tRNA synthetase [Escherichia coli 536]
 gi|115511603|gb|ABI99677.1| prolyl-tRNA synthetase [Escherichia coli APEC O1]
 gi|170518295|gb|ACB16473.1| prolyl-tRNA synthetase [Escherichia coli SMS-3-5]
 gi|190908349|gb|EDV67939.1| prolyl-tRNA synthetase [Escherichia coli F11]
 gi|215263428|emb|CAS07748.1| prolyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69]
 gi|218363905|emb|CAR01570.1| prolyl-tRNA synthetase [Escherichia coli S88]
 gi|218425634|emb|CAR06420.1| prolyl-tRNA synthetase [Escherichia coli ED1a]
 gi|222032025|emb|CAP74764.1| Prolyl-tRNA synthetase [Escherichia coli LF82]
 gi|227838141|gb|EEJ48607.1| proline--tRNA ligase [Escherichia coli 83972]
 gi|294489624|gb|ADE88380.1| prolyl-tRNA synthetase [Escherichia coli IHE3034]
 gi|300301388|gb|EFJ57773.1| prolyl-tRNA synthetase [Escherichia coli MS 185-1]
 gi|300305742|gb|EFJ60262.1| prolyl-tRNA synthetase [Escherichia coli MS 200-1]
 gi|300409810|gb|EFJ93348.1| prolyl-tRNA synthetase [Escherichia coli MS 45-1]
 gi|307552047|gb|ADN44822.1| prolyl-tRNA synthetase [Escherichia coli ABU 83972]
 gi|307629771|gb|ADN74075.1| prolyl-tRNA synthetase [Escherichia coli UM146]
 gi|312944803|gb|ADR25630.1| prolyl-tRNA synthetase [Escherichia coli O83:H1 str. NRG 857C]
 gi|315285273|gb|EFU44718.1| prolyl-tRNA synthetase [Escherichia coli MS 110-3]
 gi|315295532|gb|EFU54858.1| prolyl-tRNA synthetase [Escherichia coli MS 153-1]
 gi|315300667|gb|EFU59894.1| prolyl-tRNA synthetase [Escherichia coli MS 16-3]
 gi|323950806|gb|EGB46683.1| prolyl-tRNA synthetase [Escherichia coli H252]
 gi|323955077|gb|EGB50853.1| prolyl-tRNA synthetase [Escherichia coli H263]
 gi|324008226|gb|EGB77445.1| prolyl-tRNA synthetase [Escherichia coli MS 57-2]
 gi|324014120|gb|EGB83339.1| prolyl-tRNA synthetase [Escherichia coli MS 60-1]
 gi|324112394|gb|EGC06371.1| prolyl-tRNA synthetase [Escherichia fergusonii B253]
 gi|325496126|gb|EGC93985.1| prolyl-tRNA synthetase [Escherichia fergusonii ECD227]
 gi|331052308|gb|EGI24347.1| proline--tRNA ligase [Escherichia coli TA206]
 gi|331081801|gb|EGI52962.1| proline--tRNA ligase [Escherichia coli H299]
          Length = 572

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 66/144 (45%), Gaps = 7/144 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E+  P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVLMPVVQPSELWQESGRWEQYGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +    D     R F L P +      +  + L SY++LP+   +  + +R+E      G+
Sbjct: 96  IADRGD-----RPFVLGPTHEEVITDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNEC 404
           MR R F   DA+ F T ++   E 
Sbjct: 150 MRSREFLMKDAYSFHTSQESLQET 173


>gi|332992302|gb|AEF02357.1| prolyl-tRNA synthetase [Alteromonas sp. SN2]
          Length = 554

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 79/166 (47%), Gaps = 9/166 (5%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-K 288
           +QYL   ++    D   ++ ++ L    I +  SG+  W   G ++   + + +R ++ K
Sbjct: 4   SQYLLATQKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLNKVANIVREEMNK 63

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
               E+  P V    LW++SG W+ Y   +  +K      +  R F L P +     ++ 
Sbjct: 64  AGGVEVLMPVVQPADLWEESGRWEEYGPELLRIKD-----RHQRDFVLGPTHEEVITSLV 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
            + + SY++LP+ L +  + +R+E      G+MR R FT  DA+ F
Sbjct: 119 RNEISSYKQLPINLYQIQTKFRDEVRPRF-GIMRGREFTMKDAYSF 163


>gi|319788986|ref|YP_004150619.1| prolyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
 gi|317113488|gb|ADU95978.1| prolyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
          Length = 568

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 72/160 (45%), Gaps = 8/160 (5%)

Query: 272 GWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G ++ + +   +R+++ +   +E+  P +    LWQ+SG WD Y   M   K   +    
Sbjct: 46  GARVIRKIEQVIRQEMERAGAQEVILPIMHPAELWQESGRWDVYGKEMIKFKDRHE---- 101

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
            R +AL P        +    +KSY+ELP+ L + G  +R+E      GLMR R F   D
Sbjct: 102 -RDYALGPTAEEMITDLVRKEVKSYKELPLNLYQIGRKFRDEIRPRF-GLMRSREFIMKD 159

Query: 391 AHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
           A+ F  + E    E   +      I+K  G E   V+  T
Sbjct: 160 AYSFHASDEDAEREYWNMFETYSRIFKRLGLEFKAVEADT 199


>gi|218547650|ref|YP_002381441.1| prolyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
 gi|226701288|sp|B7LW79|SYP_ESCF3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|218355191|emb|CAQ87798.1| prolyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
 gi|323975637|gb|EGB70733.1| prolyl-tRNA synthetase [Escherichia coli TW10509]
          Length = 572

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 66/144 (45%), Gaps = 7/144 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E+  P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVLMPVVQPSELWQESGRWEQYGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +    D     R F L P +      +  + L SY++LP+   +  + +R+E      G+
Sbjct: 96  IADRGD-----RPFVLGPTHEEVITDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNEC 404
           MR R F   DA+ F T ++   E 
Sbjct: 150 MRSREFLMKDAYSFHTSQESLQET 173


>gi|288937023|ref|YP_003441082.1| prolyl-tRNA synthetase [Klebsiella variicola At-22]
 gi|288891732|gb|ADC60050.1| prolyl-tRNA synthetase [Klebsiella variicola At-22]
          Length = 572

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 66/144 (45%), Gaps = 7/144 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E+  P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVLMPVVQPSELWQESGRWEQYGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +    D     R F L P +      +  + L SY++LP+   +  + +R+E      G+
Sbjct: 96  IADRGD-----RPFVLGPTHEEVITDLIRNELNSYKQLPLNFYQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNEC 404
           MR R F   DA+ F T ++   E 
Sbjct: 150 MRSREFLMKDAYSFHTSQESLQET 173


>gi|332686700|ref|YP_004456474.1| prolyl-tRNA synthetase [Melissococcus plutonius ATCC 35311]
 gi|332370709|dbj|BAK21665.1| prolyl-tRNA synthetase [Melissococcus plutonius ATCC 35311]
          Length = 574

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 71/147 (48%), Gaps = 7/147 (4%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYR 315
           +I +  +GV  +     +I + L   MR +  K D  E+  P +L   LW++SG + +Y 
Sbjct: 31  YIRQIAAGVYAYLPLANRIIENLKKIMREEFEKIDAIEMLLPAILPAELWEKSGRYQTYG 90

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            +++ +K  ++     R + L P +    V +  + + SY+ LP+ L +  S YR+E   
Sbjct: 91  PDLYRLKDRNE-----RQYILGPTHEETFVELIGNDVNSYKRLPLNLYQIQSKYRDEKRP 145

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFN 402
              GL+R R F   D + F   E+  +
Sbjct: 146 RF-GLLRGREFIMKDGYSFHATEESLD 171


>gi|306815206|ref|ZP_07449355.1| prolyl-tRNA synthetase [Escherichia coli NC101]
 gi|305850868|gb|EFM51323.1| prolyl-tRNA synthetase [Escherichia coli NC101]
          Length = 572

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 66/144 (45%), Gaps = 7/144 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E+  P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVLMPVVQPSELWQESGRWEQYGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +    D     R F L P +      +  + L SY++LP+   +  + +R+E      G+
Sbjct: 96  IADRGD-----RPFVLGPTHEEVITDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNEC 404
           MR R F   DA+ F T ++   E 
Sbjct: 150 MRSREFLMKDAYSFHTSQESLQET 173


>gi|167630335|ref|YP_001680834.1| prolyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
 gi|226701294|sp|B0THP0|SYP_HELMI RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|167593075|gb|ABZ84823.1| prolyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
          Length = 575

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 83/183 (45%), Gaps = 11/183 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E   H+ L R      I    +GV  +   G ++ Q +++ +R ++     +E+  P 
Sbjct: 17  EAEVISHQLLLRA---GFIRRSSAGVYHYLPLGQRVLQRIMAIVREEMNAAGGQELLMPI 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    +W QSG W  Y   +F +K      +  R F L P +      +  + + SYR+L
Sbjct: 74  IQPAEIWLQSGRWHVYGDELFRLK-----DRHQRDFCLSPTHEESITDLVKNNVSSYRDL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC-LKIHNLIISIYKD 417
           P+ L    + YR+E      GLMR R F   D + F   E   +E  +K++   ++I++ 
Sbjct: 129 PMLLYHITNKYRDERRPRF-GLMRGREFIMKDLYSFDRDEAGLHESYMKMYQAYVNIFRR 187

Query: 418 FGF 420
            G 
Sbjct: 188 CGL 190


>gi|170768387|ref|ZP_02902840.1| prolyl-tRNA synthetase [Escherichia albertii TW07627]
 gi|170122491|gb|EDS91422.1| prolyl-tRNA synthetase [Escherichia albertii TW07627]
          Length = 572

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 66/144 (45%), Gaps = 7/144 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E+  P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVLMPVVQPSELWQESGRWEQYGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +    D     R F L P +      +  + L SY++LP+   +  + +R+E      G+
Sbjct: 96  IADRGD-----RPFVLGPTHEEVITDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNEC 404
           MR R F   DA+ F T ++   E 
Sbjct: 150 MRSREFLMKDAYSFHTSQESLQET 173


>gi|168214896|ref|ZP_02640521.1| phosphoribulokinase [Clostridium perfringens CPE str. F4969]
 gi|170713666|gb|EDT25848.1| phosphoribulokinase [Clostridium perfringens CPE str. F4969]
          Length = 551

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 95/200 (47%), Gaps = 14/200 (7%)

Query: 14  IKNFPVHATGSDV----AESISRSLAKKAVAVAI-------NGKVCDLSDPVR-EGSIEI 61
           +K+F V+  G  +     E  S  L K  +   I         K  + +D +  +G IE+
Sbjct: 1   MKSFRVNVNGESLLFNEGEKYSAILKKDYINEKIPITLVKQRNKYYEFTDLINNDGDIEL 60

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           I   DP        +   +  +A   ++ + ++ I   I  G + +  KE+    +++ +
Sbjct: 61  INISDPHGKIAYSRTLQFVFIKATLDLFKDARINIEHSISKGTFGEIHKEKALDEEDILK 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           I+KKMQEII ++    K  +  ++A ++F+S K   KV++L  +  +E V LY+  + +D
Sbjct: 121 IKKKMQEIIDKNIIIEKIKMPKKEAIDIFKSYKMQDKVDLLHWV-QEEYVNLYKLEDRYD 179

Query: 182 LCRGPHVRSTGQVKKFFKLM 201
              G    STG V K+F L+
Sbjct: 180 YFYGDMAYSTG-VLKYFDLL 198


>gi|312966332|ref|ZP_07780558.1| prolyl-tRNA synthetase [Escherichia coli 2362-75]
 gi|312289575|gb|EFR17469.1| prolyl-tRNA synthetase [Escherichia coli 2362-75]
 gi|323190405|gb|EFZ75680.1| prolyl-tRNA synthetase [Escherichia coli RN587/1]
          Length = 547

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 66/144 (45%), Gaps = 7/144 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E+  P V    LWQ+SG W+ Y   +  
Sbjct: 11  ASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVLMPVVQPSELWQESGRWEQYGPELLR 70

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +    D     R F L P +      +  + L SY++LP+   +  + +R+E      G+
Sbjct: 71  IADRGD-----RPFVLGPTHEEVITDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRF-GV 124

Query: 381 MRVRGFTQDDAHVFCTKEQMFNEC 404
           MR R F   DA+ F T ++   E 
Sbjct: 125 MRSREFLMKDAYSFHTSQESLQET 148


>gi|310779485|ref|YP_003967818.1| prolyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
 gi|309748808|gb|ADO83470.1| prolyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
          Length = 570

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 67/145 (46%), Gaps = 11/145 (7%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SGV  +   G+K  + +   +R ++ +   +EI  P +    +WQ+SG WD+    M  
Sbjct: 36  ASGVYTYLPLGYKALRKVEKIVREEMERAGSQEIFMPVLQPSEIWQESGRWDTMGPEMMR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +K   D     R F L P +      +  + + SY+ LP+ L +  + +R+E      GL
Sbjct: 96  IKDRHD-----REFVLGPTHEEVITDIVRNDISSYKSLPMNLYQIQTKFRDERRPRF-GL 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECL 405
           MR R F   DA+ F   E    ECL
Sbjct: 150 MRSREFLMKDAYSFHASE----ECL 170


>gi|296330872|ref|ZP_06873347.1| prolyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305674390|ref|YP_003866062.1| prolyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|296151877|gb|EFG92751.1| prolyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305412634|gb|ADM37753.1| prolyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 564

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 79/168 (47%), Gaps = 10/168 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E + H+ L R      I ++ SGV  +    +K+ Q +   +R ++ K D  E+  P 
Sbjct: 17  DAEAKSHQLLLR---AGFIRQNTSGVYSYMPLAYKVIQNIQQIVREEMEKIDAVEMLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +     WQ+SG W +Y   +  +K      +  R FAL   +     ++    +KSY+ L
Sbjct: 74  LQQAETWQESGRWYTYGPELMRLKD-----RHGREFALGATHEEVITSLVRDEVKSYKRL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           P+ L +  S +R+E      GL+R R F   DA+ F   E+  +E  +
Sbjct: 129 PLTLYQIQSKFRDEKRPRF-GLLRGREFIMKDAYSFHATEESLDETYQ 175


>gi|290512444|ref|ZP_06551810.1| prolyl-tRNA synthetase [Klebsiella sp. 1_1_55]
 gi|289774785|gb|EFD82787.1| prolyl-tRNA synthetase [Klebsiella sp. 1_1_55]
          Length = 583

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/184 (24%), Positives = 81/184 (44%), Gaps = 10/184 (5%)

Query: 225 WNT-QQELTQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLIS 281
           WN      +QYL    +    D   ++ ++ L    I +  SG+  W   G ++ + + +
Sbjct: 7   WNRYNMRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVEN 66

Query: 282 YMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
            +R ++ +    E+  P V    LWQ+SG W+ Y   +  +    D     R F L P +
Sbjct: 67  IVREEMNNAGAIEVLMPVVQPSELWQESGRWEQYGPELLRIADRGD-----RPFVLGPTH 121

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
                 +  + L SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++ 
Sbjct: 122 EEVITDLIRNELNSYKQLPLNFYQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHTSQES 180

Query: 401 FNEC 404
             E 
Sbjct: 181 LQET 184


>gi|168207596|ref|ZP_02633601.1| phosphoribulokinase [Clostridium perfringens E str. JGS1987]
 gi|170661048|gb|EDT13731.1| phosphoribulokinase [Clostridium perfringens E str. JGS1987]
          Length = 551

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 95/200 (47%), Gaps = 14/200 (7%)

Query: 14  IKNFPVHATGSDV----AESISRSLAKKAVAVAI-------NGKVCDLSDPVR-EGSIEI 61
           +K+F V+  G  +     E  S  L K  +   I         K  + +D +  +G IE+
Sbjct: 1   MKSFRVNVNGESLLFNEGEKYSAILKKDYINEKIPITLVKQRNKYYEFTDLINNDGDIEL 60

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           I   DP        +   +  +A   ++ + ++ I   I  G + +  KE+    +++ +
Sbjct: 61  INISDPHGKIAYSRTLQFVFIKATLDLFKDARINIEHSISKGTFGEIHKEKALDEEDILK 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           I+KKMQEII ++    K  +  ++A ++F+S K   KV++L  +  +E V LY+  + +D
Sbjct: 121 IKKKMQEIIDKNIIIEKIKMPKKEAIDIFKSYKMQDKVDLLHWV-QEEYVNLYKLEDRYD 179

Query: 182 LCRGPHVRSTGQVKKFFKLM 201
              G    STG V K+F L+
Sbjct: 180 YFYGDMAYSTG-VLKYFDLL 198


>gi|237729500|ref|ZP_04559981.1| prolyl-tRNA synthetase [Citrobacter sp. 30_2]
 gi|226909229|gb|EEH95147.1| prolyl-tRNA synthetase [Citrobacter sp. 30_2]
          Length = 590

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/184 (23%), Positives = 82/184 (44%), Gaps = 10/184 (5%)

Query: 225 WN-TQQELTQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLIS 281
           WN      +QYL    +    D   ++ ++ L    I +  SG+  W   G ++ + + +
Sbjct: 14  WNRNNMRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVEN 73

Query: 282 YMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
            +R ++ +    E+  P V    LW++SG W+ Y   +  +    D     R+F L P +
Sbjct: 74  IVREEMNNAGAIEVLMPVVQPSELWEESGRWEQYGPELLRIADRGD-----RSFVLGPTH 128

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
                 +  + L SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++ 
Sbjct: 129 EEVITDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHTSQES 187

Query: 401 FNEC 404
             E 
Sbjct: 188 LQET 191


>gi|209548882|ref|YP_002280799.1| prolyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|226701324|sp|B5ZYN2|SYP_RHILW RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|209534638|gb|ACI54573.1| prolyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 440

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/195 (25%), Positives = 83/195 (42%), Gaps = 11/195 (5%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTP 297
           +E+E   HR + R      I +   G+  W   G ++   + + +R  + +    E++ P
Sbjct: 16  KEAEIVSHRLMLRAG---MIRQQSQGIYSWLPLGKRVLDKVNAIIRDEQNRAGAIELSMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LWQ+SG +D+Y   M  +K   D     R     P N      +F   +KSY++
Sbjct: 73  TLQSAELWQESGRYDAYGKEMLRIKDRQD-----RPMLYGPTNEEMVTDIFRSSVKSYKD 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYK 416
           LP+ L      +R+E      G MR R F   DA+ F  T+E   +   K+    +  + 
Sbjct: 128 LPLNLYHIQLKFRDEIRPRF-GTMRSREFMMKDAYSFDLTREGAEHSYNKMFAAYLRTFD 186

Query: 417 DFGFEKIMVKLSTRP 431
             G   I ++  T P
Sbjct: 187 RLGLRAIPMRADTGP 201


>gi|302379784|ref|ZP_07268268.1| proline--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
 gi|302312372|gb|EFK94369.1| proline--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
          Length = 576

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 82/168 (48%), Gaps = 12/168 (7%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDY--EEINT 296
           +++E   H+ L R      I +  +G+  +   G++I + + + +R ++ D+Y  +EI+ 
Sbjct: 16  QDAEIASHKLLLR---AGMIRKTAAGLYSYLPLGYRIVRKVENIVREEM-DNYGSQEIHM 71

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P    + +W++SG W ++   MF +K  ++     R F L P        +    +KSY+
Sbjct: 72  PITQPREIWEESGRWKTFGPEMFKLKDRNN-----REFCLGPTAEEYFTDLVKGEIKSYK 126

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           +LP+ + +  + YR+E      G+ R R F   DA+ F   E+   E 
Sbjct: 127 QLPLNIYQIQTKYRDEKRPRF-GINRSREFLMQDAYTFDVDEEAMGEA 173


>gi|283835256|ref|ZP_06354997.1| proline--tRNA ligase [Citrobacter youngae ATCC 29220]
 gi|291068967|gb|EFE07076.1| proline--tRNA ligase [Citrobacter youngae ATCC 29220]
          Length = 572

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 66/144 (45%), Gaps = 7/144 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E+  P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVLMPVVQPSELWQESGRWEQYGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +    D     R F L P +      +  + L SY++LP+   +  + +R+E      G+
Sbjct: 96  IADRGD-----RPFVLGPTHEEVITDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNEC 404
           MR R F   DA+ F T ++   E 
Sbjct: 150 MRSREFLMKDAYSFHTSQESLQET 173


>gi|290473678|ref|YP_003466550.1| proline tRNA synthetase [Xenorhabdus bovienii SS-2004]
 gi|289172983|emb|CBJ79754.1| proline tRNA synthetase [Xenorhabdus bovienii SS-2004]
          Length = 573

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/162 (24%), Positives = 76/162 (46%), Gaps = 8/162 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E++ P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYNWMPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +      +  R F L P +      +  + + SY++LP+ L +  + +R+E      G+
Sbjct: 96  FED-----RGARPFVLGPTHEEVITDLVRNEVTSYKQLPLNLFQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFE 421
           MR R F   DA+ F T ++   E   K+++    I+   G +
Sbjct: 150 MRSREFIMKDAYSFHTSQESLQETYDKMYDAYSKIFTRIGLD 191


>gi|237746898|ref|ZP_04577378.1| prolyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
 gi|229378249|gb|EEO28340.1| prolyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
          Length = 578

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 74/162 (45%), Gaps = 8/162 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           GSG+  +   G ++   + + +R ++ +    E+  P V    LWQ++G W  Y   +  
Sbjct: 36  GSGIYAYMPMGLRVIHKIENIIREEMNRAGAVELLMPLVQPAELWQETGRWQKYGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           VK   D     R F ++P +      +  + +KSYR+LP+      + +R+E      GL
Sbjct: 96  VKDRHD-----RDFIIQPTSEEVITDIARNVIKSYRQLPINFYHIQTKFRDERRPRF-GL 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKI-HNLIISIYKDFGFE 421
           MR R FT  DA+ F        +  ++  +  I I+  FG +
Sbjct: 150 MRGREFTMKDAYSFDRDVAGLKKSYQVMFDAYIKIFTRFGLK 191


>gi|325847870|ref|ZP_08170092.1| proline--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
 gi|325480888|gb|EGC83941.1| proline--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
          Length = 572

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 76/157 (48%), Gaps = 10/157 (6%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
           +++E + H+ L R      I +  SGV  +   G ++   + + +R+ + K D  E++T 
Sbjct: 16  QDAETQSHKLLVRGA---FIRKTSSGVYSYLPLGMRVINKIENIVRKSMEKYDSIEVSTS 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +  + +W++SG W ++   MF +K   D     R + L P       ++    L SY++
Sbjct: 73  VLQSKDIWEKSGRWQNFGPEMFKIKDRHD-----REYCLGPTAEEQFTSLIKDELNSYKQ 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           LP+ L +  S +R+E      G+ R R F   DA+ F
Sbjct: 128 LPLNLYQIVSKFRDEKRPRF-GINRSRDFIMKDAYSF 163


>gi|251780827|ref|ZP_04823747.1| putative threonyl-tRNA synthetase/uridine kinase [Clostridium
           botulinum E1 str. 'BoNT E Beluga']
 gi|243085142|gb|EES51032.1| putative threonyl-tRNA synthetase/uridine kinase [Clostridium
           botulinum E1 str. 'BoNT E Beluga']
          Length = 548

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/164 (27%), Positives = 75/164 (45%), Gaps = 2/164 (1%)

Query: 35  AKKAVAVAINGKVCDLSDPVRE-GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQ 93
            K      +NGK  +L D + E G IE I       L +   +   I  +A   ++P  +
Sbjct: 30  VKNIALCKLNGKYHELRDIISESGEIETINFNTEMGLNIYTRTLQFIFIKATLDLFPNSK 89

Query: 94  VAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESK 153
           + I   I  G + +  KE+P +  ++  I++KM+EII ++       +S ++A  +F+  
Sbjct: 90  IKIEHSISKGLFGEVIKEEPLNEKDIKLIKEKMKEIIIKNVLINSIRISKDEAISIFDQY 149

Query: 154 KEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
               KV +LE+    E V LY     +D   G    STG +K F
Sbjct: 150 GMEDKVLLLENSNLNE-VKLYELEGRYDYFYGQMAYSTGIIKAF 192


>gi|311103966|ref|YP_003976819.1| prolyl-tRNA synthetase [Achromobacter xylosoxidans A8]
 gi|310758655|gb|ADP14104.1| prolyl-tRNA synthetase [Achromobacter xylosoxidans A8]
          Length = 575

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 81/177 (45%), Gaps = 18/177 (10%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQ 298
           E+E   H+ + R   +  +A    G+  +   G K+ + + + +R ++      E+  P 
Sbjct: 17  EAEVASHQLMTRAGMIRKLA---GGIYTYMPLGLKVIRKVEAIVREEMNAAGAIELLMPV 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    LWQ+SG W+ Y A +  +K      +  R F L+P +      +  + + SYR+L
Sbjct: 74  VQPAELWQESGRWEQYGAELLRIKD-----RHQRDFVLQPTSEEVITDIARNEIHSYRQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF--------CTKEQMFNECLKI 407
           PV      + +R+E      GLMR R FT  DA+ F         + + M+N  ++I
Sbjct: 129 PVNFYHIQTKFRDERRPRF-GLMRGREFTMKDAYSFDRDEAGAQASYDTMYNAYMRI 184


>gi|311280836|ref|YP_003943067.1| prolyl-tRNA synthetase [Enterobacter cloacae SCF1]
 gi|308750031|gb|ADO49783.1| prolyl-tRNA synthetase [Enterobacter cloacae SCF1]
          Length = 572

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 66/144 (45%), Gaps = 7/144 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E+  P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVLMPVVQPSELWQESGRWEQYGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +    D     R F L P +      +  + L SY++LP+   +  + +R+E      G+
Sbjct: 96  IADRGD-----RPFVLGPTHEEVITDLIRNELNSYKQLPLNFYQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNEC 404
           MR R F   DA+ F T ++   E 
Sbjct: 150 MRSREFLMKDAYSFHTSQESLQET 173


>gi|262065930|ref|ZP_06025542.1| proline--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
 gi|291380410|gb|EFE87928.1| proline--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
          Length = 567

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 77/166 (46%), Gaps = 10/166 (6%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
           +E+E   H+ + R   +  +A   SG+  +   G++  + + + +R ++ +    E+  P
Sbjct: 16  KEAEIASHKLMLRAAMIKKLA---SGIYAYLPLGYRTIRKIENIVREEMDRAGALELLMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            V    LWQ+SG WD   A M  ++   +     R F L P       ++    + SY+ 
Sbjct: 73  VVQPAELWQESGRWDVMGAEMLRLQDRHE-----RDFVLSPTQEEMITSIVRSDISSYKS 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE 403
           LP+ L    + +R+E      GLMR R FT  D + F T ++  +E
Sbjct: 128 LPLNLYHIQTKFRDERRPRF-GLMRGREFTMKDGYSFHTSQESLDE 172


>gi|144899844|emb|CAM76708.1| prolyl-tRNA synthetase [Magnetospirillum gryphiswaldense MSR-1]
          Length = 429

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 75/176 (42%), Gaps = 18/176 (10%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E++   HR + R      I +  SG+  W   GWK+ Q +   +R  +     +E+  P 
Sbjct: 17  EAQIASHRLMLRAG---MIRQSASGIYTWLPLGWKVLQKIEQIVREEQDAAGAQELLMPT 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    +W++SG +D+Y   M  +    D     R     P N      +F   +KSYREL
Sbjct: 74  IQSADIWRESGRYDAYGKEMLRIVDRHD-----REMLFGPTNEELITQIFRDNVKSYREL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF--------CTKEQMFNECLK 406
           P  L      +R+E      G+MR R F   D++ F         + E MFN  L+
Sbjct: 129 PKILYHIQWKFRDEVRPRF-GVMRGREFLMKDSYSFDIDFDGAKRSYEAMFNAYLR 183


>gi|222151097|ref|YP_002560251.1| proline-tRNA ligase [Macrococcus caseolyticus JCSC5402]
 gi|254782906|sp|B9EBE4|SYP_MACCJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|222120220|dbj|BAH17555.1| proline-tRNA ligase [Macrococcus caseolyticus JCSC5402]
          Length = 568

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 71/150 (47%), Gaps = 7/150 (4%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  SGV  +     ++   + S +R +++  D  EI  P +    LW +SG W SY A
Sbjct: 32  IKQVASGVYSYLPIAKRVLNKIESIVREEMEAIDGVEILMPALQPSELWSESGRWQSYGA 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            +  +     T +  R FAL P +     ++    LKSY++LPV L +  + +R+E    
Sbjct: 92  ELMRM-----TDRHGREFALGPTHEEIITSLVRDELKSYKKLPVTLFQIQNKFRDEKRPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
             GL+R R F   DA+ F   E   +E  +
Sbjct: 147 F-GLLRGREFIMKDAYSFHATEASLDETYQ 175


>gi|121533721|ref|ZP_01665548.1| prolyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
 gi|121307712|gb|EAX48627.1| prolyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
          Length = 567

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 76/165 (46%), Gaps = 8/165 (4%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +   G+  +    W++ + + + +R ++     +E+  P V    +W+++G WD Y  
Sbjct: 32  IRKAAGGIYTYLPLAWRVLKKIETIIREEMDAKGGQELLMPIVQPAEIWKKTGRWDVYGD 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            MF +K      +  R F L P +      +    ++SYR+LP+ L +  + YR+E    
Sbjct: 92  EMFRLK-----DRHQRDFCLGPTHEEMITTLVRDEVRSYRQLPLLLYQIQNKYRDEIRPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGF 420
             GLMR R F   D + F   E+  NE   K+++    ++   G 
Sbjct: 147 F-GLMRGREFIMKDLYSFDRDEEGLNESYNKMYDAYTRVFTRCGL 190


>gi|308048689|ref|YP_003912255.1| prolyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
 gi|307630879|gb|ADN75181.1| prolyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
          Length = 570

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 68/144 (47%), Gaps = 7/144 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            +G+  W   G ++ + + + +R ++ +    E   P V    LWQ++G WD   A M  
Sbjct: 36  AAGLYTWLPSGLRVLRKVENIVREEMNRAGAVETLMPVVQPADLWQETGRWDDMGAEMAR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +K   D     R F L P +      +  + +KSY++LP+ L +  + +R+E      G+
Sbjct: 96  LKDRHD-----RDFVLGPTHEEVITDLVRNEIKSYKQLPINLYQIQTKFRDERRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNEC 404
           MR R F   DA+ F   ++  +E 
Sbjct: 150 MRAREFLMKDAYSFHLDQETMDET 173


>gi|269123109|ref|YP_003305686.1| prolyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
 gi|268314435|gb|ACZ00809.1| prolyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
          Length = 574

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 72/143 (50%), Gaps = 11/143 (7%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK 322
           GV  +   G K+ + + + +R ++ K + +EI  P +    LWQ+SG W SY A +  + 
Sbjct: 38  GVYTYLPLGLKVLKKIENIVREELNKINAQEILMPVLQPADLWQESGRWFSYGAELMRLH 97

Query: 323 CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMR 382
             ++     R F L P +    V +F + + SY++LP+ + +  + +R+E      GLMR
Sbjct: 98  DRNN-----RDFVLGPTHEEVIVDLFRNIVTSYKDLPLNVYQIQTKFRDERRPRF-GLMR 151

Query: 383 VRGFTQDDAHVFCTKEQMFNECL 405
            R F   DA+ F     +  ECL
Sbjct: 152 GREFIMKDAYSF----HLTQECL 170


>gi|148269548|ref|YP_001244008.1| prolyl-tRNA synthetase [Thermotoga petrophila RKU-1]
 gi|166980169|sp|A5IJQ9|SYP_THEP1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|147735092|gb|ABQ46432.1| prolyl-tRNA synthetase [Thermotoga petrophila RKU-1]
          Length = 577

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 65/141 (46%), Gaps = 18/141 (12%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           +EI  P +    LW+QSG WD Y   M  +K   +     R F L P +      +  + 
Sbjct: 67  QEILMPILQPAELWKQSGRWDDYGPEMMKLKDRHE-----RDFTLGPTHEEIVTDLVKNE 121

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI 411
           L+SY++LP+ L +  + YR+E      GL+R R F   DA+ F    +  +E        
Sbjct: 122 LRSYKQLPLTLYQIANKYRDEIRPRF-GLLRAREFIMKDAYSFHASWESLDET------- 173

Query: 412 ISIYKDF--GFEKIMVKLSTR 430
              Y++F   + +IM +L  R
Sbjct: 174 ---YEEFKKAYSRIMERLGVR 191


>gi|315282166|ref|ZP_07870634.1| prolyl-tRNA synthetase [Listeria marthii FSL S4-120]
 gi|313614198|gb|EFR87874.1| prolyl-tRNA synthetase [Listeria marthii FSL S4-120]
          Length = 308

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 75/169 (44%), Gaps = 16/169 (9%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKI----KDDYEEINTPQVL-----DQHLWQQSGHWDS 313
           +G I     G   +  L + M RKI    +++ E I   ++L        LWQ+SG W+ 
Sbjct: 29  AGFIRQTASGIYSYLPLATLMLRKIETIIREELEAIGAAELLMPALQPAELWQESGRWND 88

Query: 314 YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP 373
           Y   +  +K      +  R FAL P +     A+    +KSY+ LP+ L +  + +R+E 
Sbjct: 89  YGPELMRLKD-----RASRDFALGPTHEEVITALLRDEVKSYKRLPLTLYQIQTKFRDEK 143

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI-HNLIISIYKDFGFE 421
                GL+R R F   DA+ F    +  +E   + H    +I+   G E
Sbjct: 144 RPRF-GLLRGREFIMKDAYSFHATSESLDEVYNLMHQAYSNIFTRCGLE 191


>gi|298489744|ref|YP_003719921.1| prolyl-tRNA synthetase ['Nostoc azollae' 0708]
 gi|298231662|gb|ADI62798.1| prolyl-tRNA synthetase ['Nostoc azollae' 0708]
          Length = 597

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 67/145 (46%), Gaps = 6/145 (4%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSY- 314
           +I   GSGV  +    W++ Q +   +R ++     EE   PQ+    LW+ SG WD+Y 
Sbjct: 31  YIRRIGSGVYAYLPLMWRVLQKVSQIVREEMNATGAEECLLPQLQPAELWKDSGRWDTYT 90

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
           +A        D   + L    L P +      V    ++SYR+LP+ L +  + +R+E  
Sbjct: 91  KAEGIMFSLIDRREQQL---GLGPTHEEVITTVARDMIRSYRQLPLHLYQIQTKFRDEIR 147

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQ 399
               GLMR R F   D + F T E+
Sbjct: 148 PRF-GLMRSREFIMKDGYSFHTDEE 171


>gi|116075299|ref|ZP_01472559.1| prolyl-tRNA synthetase [Synechococcus sp. RS9916]
 gi|116067496|gb|EAU73250.1| prolyl-tRNA synthetase [Synechococcus sp. RS9916]
          Length = 600

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 82/173 (47%), Gaps = 7/173 (4%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINT--PQVLDQHLWQQSGHWDSY 314
           +I   GSG+  +    W++ + + + +++++ D    + T  PQ+    LW++SG W  Y
Sbjct: 31  YIRRVGSGIYAYLPLMWRVLRKISAIVQQEM-DATGALETLLPQLQPAELWERSGRWQGY 89

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
            A    +   +D  +  R   L P +     ++    L+SYR+LPV + +  + +R+E  
Sbjct: 90  TAGEGIMFHLED--RQGRQVGLGPTHEEVVTSLAGELLRSYRQLPVTVYQIQNKFRDEIR 147

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII-SIYKDFGFEKIMVK 426
               GLMR R F   DA+ F   EQ    C    +L    I++  G + + V+
Sbjct: 148 PRF-GLMRGREFIMKDAYSFHADEQDLGRCYGEMDLAYRRIFERCGLQAVAVE 199


>gi|104783084|ref|YP_609582.1| prolyl-tRNA synthetase [Pseudomonas entomophila L48]
 gi|123380820|sp|Q1I6D7|SYP_PSEE4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|95112071|emb|CAK16798.1| prolyl-tRNA synthetase [Pseudomonas entomophila L48]
          Length = 571

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/194 (23%), Positives = 87/194 (44%), Gaps = 10/194 (5%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           +QYL   ++    D   ++ ++ L    I +  SG+  W   G ++ + + + +R ++  
Sbjct: 4   SQYLLATQKETPADAVVISHQLMLRAGMIRKLASGLYTWLPMGLRVMRKVEAVVREEMNA 63

Query: 290 DYE-EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
               E+  P +    LWQ+SG W+ Y   +  +K   D     R F + P +      + 
Sbjct: 64  AGALEVLMPSIQPAELWQESGRWEQYGPELLRLKDRHD-----RDFCVGPTHEEVITDLA 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KI 407
            + L SY++LP+ + +  + +R+E      GLMR R F   DA+ F   +    E   ++
Sbjct: 119 RNELSSYKQLPLNMYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSFHADQASLQETYDRM 177

Query: 408 HNLIISIYKDFGFE 421
           H    +I+   G +
Sbjct: 178 HQAYSNIFTRLGLD 191


>gi|67678259|gb|AAH97752.1| LOC733275 protein [Xenopus laevis]
          Length = 300

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 95/196 (48%), Gaps = 22/196 (11%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT--PEDPRSL-AVIRHS 76
           +T    A  +S     K+V   ++G+V D+  P+ +  +I+ +T   EDP  +      S
Sbjct: 46  STPYHCAMHLSEWYCSKSVLALVDGEVWDMYKPLTKSCNIQFLTFKDEDPEEVNKAYWRS 105

Query: 77  CAHIMAEAVQSIWPE------VQVAIGPIIEDGFYYD------FDKEQPFSSDELAQIEK 124
           CA I+   +++ + E      ++    P+I   F YD       D  +P + + L  + K
Sbjct: 106 CAMILGCVLENAFKEEYMVNLIRAPKIPVISGAFCYDVVLDSQLDDWRP-TEENLRSLTK 164

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN---VTLYRQGEWFD 181
           +   +I +D PF    +  + ARE+F+    AYK+ ++E   A+     VT++R G++ D
Sbjct: 165 EAHSLIHKDLPFESMEVEEKVAREIFQHN--AYKLILVEEKAAQSPQGLVTVHRFGDFVD 222

Query: 182 LCRGPHVRSTGQVKKF 197
           L  GPH+  T   +++
Sbjct: 223 LTDGPHIPRTSFCQQY 238


>gi|187251094|ref|YP_001875576.1| prolyl-tRNA synthetase [Elusimicrobium minutum Pei191]
 gi|226701286|sp|B2KCB2|SYP_ELUMP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|186971254|gb|ACC98239.1| Prolyl-tRNA synthetase [Elusimicrobium minutum Pei191]
          Length = 573

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 78/177 (44%), Gaps = 9/177 (5%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFH--IAEDGSGVIFWHRKGWKIFQTLISYMRRKI 287
           +LTQY     +   +D   ++ ++ L    I +  SG+  W   G K+ + +   +R ++
Sbjct: 2   KLTQYYLPTLKEAPKDADTISAKLMLRAGLIRKTASGIYEWLPLGLKVLKKVEQIVREEM 61

Query: 288 -KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA 346
                 E+  P +  + LW++SG W  Y   +  +K      +    F   P        
Sbjct: 62  DAAGAHEVWLPLIQPKELWEESGRWTYYGKELLRIKD-----RKGAEFCFAPTAEEVITD 116

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE 403
           V    + SY++LPV L +F S +R+E      G+MR R F   DA+ F   E+  NE
Sbjct: 117 VVRRDVTSYKQLPVALYQFASKFRDEIRPRF-GVMRAREFYMKDAYSFHATEESINE 172


>gi|241668104|ref|ZP_04755682.1| prolyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254876639|ref|ZP_05249349.1| prolyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254842660|gb|EET21074.1| prolyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 565

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 72/161 (44%), Gaps = 8/161 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G K+ Q + + +R ++ K    E+  P VL   L Q++  WD +   +  
Sbjct: 36  ASGIYTWMPIGLKVLQKIQNIVREEMNKAGASELLLPSVLPSELLQETHRWDKFGPELLK 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +K   +     R F   P +    V +    +KSY++LP+ L +  + +R+E      G+
Sbjct: 96  LKDRHE-----RDFCYGPTHEEPIVDMARDTIKSYKQLPLNLYQIQTKFRDEIRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQ-MFNECLKIHNLIISIYKDFGF 420
           MR R F   DA+ F    Q + N   K+H    +I    G 
Sbjct: 150 MRAREFIMKDAYSFHENSQCLHNTYNKMHETYCNILDKIGL 190


>gi|182626478|ref|ZP_02954229.1| putative threonyl-tRNA synthetase/uridine kinase [Clostridium
           perfringens D str. JGS1721]
 gi|177908218|gb|EDT70779.1| putative threonyl-tRNA synthetase/uridine kinase [Clostridium
           perfringens D str. JGS1721]
          Length = 551

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 76/146 (52%), Gaps = 2/146 (1%)

Query: 56  EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFS 115
           +G IE+I   DP        +   +  +A   ++ + ++ I   I  G + +  KE+   
Sbjct: 55  DGDIELINISDPHGKIAYSRTLQFVFIKATLDLFKDARINIEHSISKGTFGEIHKEKALD 114

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            +++ +I+KKMQEII ++    K  +  ++A ++F+S K   KV++L  +  +E V LY+
Sbjct: 115 EEDILKIKKKMQEIIDKNIIIEKIKMPKKEAIDIFKSYKMQDKVDLLHWV-QEEYVNLYK 173

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLM 201
             + +D   G    STG V K+F L+
Sbjct: 174 LEDRYDYFYGDMAYSTG-VLKYFDLL 198


>gi|157825653|ref|YP_001493373.1| prolyl-tRNA synthetase [Rickettsia akari str. Hartford]
 gi|166980149|sp|A8GN90|SYP_RICAH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|157799611|gb|ABV74865.1| prolyl-tRNA synthetase [Rickettsia akari str. Hartford]
          Length = 427

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 77/179 (43%), Gaps = 14/179 (7%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  +G+  W   G K+ + + + +   + K    E+  P +   HLW +SG +++Y  
Sbjct: 32  IRQQAAGIYTWLPLGLKVLKNIENIVSLNMNKAGALEVLMPCIQPAHLWMESGRFNNYGK 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M   +   D      T    P N      +F H +KSY++LP  L      +R+E    
Sbjct: 92  EMLKFQDRHDN-----TLLFGPTNEDMITDIFRHNIKSYKDLPKNLYHIQWKFRDEIRPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQ----MFNECLKIHNLIISIYKDFGFEKIMVKLSTRP 431
             G+MR R F   DA+ F   E+     +N+  K +   I+ ++D G   I V     P
Sbjct: 147 F-GVMRGREFLMKDAYSFDINEENAVKTYNQMYKAY---INTFRDLGVFAIPVIADNGP 201


>gi|332297614|ref|YP_004439536.1| phosphoribulokinase/uridine kinase [Treponema brennaborense DSM
           12168]
 gi|332180717|gb|AEE16405.1| phosphoribulokinase/uridine kinase [Treponema brennaborense DSM
           12168]
          Length = 550

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 88/195 (45%), Gaps = 5/195 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI-EIIT 63
           I+LT P G            D  ++      +   AV IN ++  L+  +   ++ E + 
Sbjct: 4   IELTLPSGKKVTAAAGVRALDFTQTFDCD-PETVFAVRINNEIRALNTVLDVNAVLEPVV 62

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
                  A+ R +   I+A A    +P  ++ +G  +  G+YY  + E+   ++++A ++
Sbjct: 63  SGSRDGSAIYRRTLCFILAAAAHECFPGTRLLVGHSLGYGYYYTLETEKTPGAEDIAALK 122

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESI-PAKENVTLYRQGEWFDL 182
            +MQ IIA + P     +S+  A  LFES       + L  I P K  + +   G + D 
Sbjct: 123 AEMQRIIAWNQPIETDTVSYRDAAALFESLGLTETRKQLNYICPPK--IAVNTLGSFSDQ 180

Query: 183 CRGPHVRSTGQVKKF 197
             GP + +TG++K F
Sbjct: 181 YFGPLLDTTGKIKAF 195


>gi|319940262|ref|ZP_08014614.1| prolyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
 gi|319810564|gb|EFW06900.1| prolyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
          Length = 619

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 65/121 (53%), Gaps = 11/121 (9%)

Query: 279 LISYMRRKIKDDYEEINT-----PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           +I  +++ +++++E+I       P +L   LW++SG +D+Y  +++ +K  + +      
Sbjct: 49  VIEKVKKIMREEFEKIGAVEMLAPALLSADLWRESGRYDTYGEDLYKLKNREGS-----D 103

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
           F L P +     A+    +KSY++LP+ L +  + YR+E     +GL+R R F   D + 
Sbjct: 104 FILGPTHEETFTAIVRDSVKSYKQLPLNLYQIQAKYRDEKR-PRNGLLRTREFIMKDGYS 162

Query: 394 F 394
           F
Sbjct: 163 F 163


>gi|258516344|ref|YP_003192566.1| prolyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
 gi|257780049|gb|ACV63943.1| prolyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
          Length = 572

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/187 (26%), Positives = 87/187 (46%), Gaps = 19/187 (10%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDY-----EEI 294
           E+E   H+ L R     +I    +GV  +      + Q ++S ++R ++++      +EI
Sbjct: 17  EAEVISHKLLLRAG---YIRRSAAGVYTY----LPLAQRVLSKIKRIVREEMDRQGGQEI 69

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
             P +    LWQ+SG WD Y   +F +K      +  R FAL P +     A+    L S
Sbjct: 70  LMPIMQPAELWQESGRWDVYGPELFRLKD-----RHGRDFALGPTHEEIITALVKSELSS 124

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIIS 413
           Y++LP+ L +  + YR+E      GL+R R F   D + F   E   +    K+++  + 
Sbjct: 125 YKQLPLLLYQIQNKYRDERRPRF-GLLRGREFIMKDLYSFDADEAGLDITYRKMYDAYVR 183

Query: 414 IYKDFGF 420
           I++  G 
Sbjct: 184 IFQRCGL 190


>gi|313887818|ref|ZP_07821498.1| proline--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
 gi|312846161|gb|EFR33542.1| proline--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
          Length = 567

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 81/171 (47%), Gaps = 15/171 (8%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  SGV  +   G++  + + + +R ++ K    EI    +    +W++SG W+ +  
Sbjct: 32  IRKSASGVYTYLPLGYRSIRKIENIVRDEMDKAGAMEILMSAIQPAEIWKESGRWEKFGP 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            MF ++  +D     R F L P        +    +KSY++LP+ L +  + YR+E    
Sbjct: 92  EMFKLRDRND-----REFCLGPTAEEYFTTLIRDEVKSYKDLPLNLYQIQTKYRDEKRPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKL 427
             G+ R R F+  DA+ F T  +       +H   +++Y+   +EKI  +L
Sbjct: 147 F-GINRAREFSMKDAYTFDTSPET------LHTAYMNMYE--AYEKIFDRL 188


>gi|33152900|ref|NP_874253.1| prolyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
 gi|81836009|sp|Q7VKI5|SYP_HAEDU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|33149125|gb|AAP96642.1| prolyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
          Length = 571

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/195 (25%), Positives = 87/195 (44%), Gaps = 14/195 (7%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-K 288
           +QYL+   +    D + ++ ++ L    I    +G+  W   G KI + + + +R ++ K
Sbjct: 4   SQYLFSTLKETPNDAQVISHQLMLRAGMIRPTAAGLYNWLPTGVKILKKVENIIREEMNK 63

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
               EI  P V    LWQ+S  W+ Y   +   + AD   +  R F L P +      + 
Sbjct: 64  GGAIEILMPVVQPAELWQESSRWEQYGPELL--RFAD---RGKRDFVLGPTHEEVITDLV 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI- 407
              L SY++LP+ L +  + +R+E      G+MR R F   DA+ F T  +   +  ++ 
Sbjct: 119 RRELSSYKQLPLNLYQIQTKFRDEVRPRF-GVMRSREFVMKDAYSFHTTPESLQQTYEVM 177

Query: 408 ----HNLIISIYKDF 418
               H +   +  DF
Sbjct: 178 YQVYHRIFTRLGLDF 192


>gi|327481520|gb|AEA84830.1| prolyl-tRNA synthetase [Pseudomonas stutzeri DSM 4166]
          Length = 571

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/161 (24%), Positives = 71/161 (44%), Gaps = 8/161 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G +  +   + +R ++ K    E+  P +    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYTWMPMGLRALRKAEAIVREEMNKAGALEVLMPAIQPAELWQESGRWEQYGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +K   D     R F + P +      +  + L SY++LP+   +  + +R+E      GL
Sbjct: 96  LKDRHD-----REFCVGPTHEEVITDLARNELNSYKQLPINFYQIQTKFRDEIRPRF-GL 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGF 420
           MR R F   DA+ F   ++   E   ++H    +I+   G 
Sbjct: 150 MRGREFLMKDAYSFHLSQESLQETYDRMHQAYCNIFTRLGL 190


>gi|289432262|ref|YP_003462135.1| prolyl-tRNA synthetase [Dehalococcoides sp. GT]
 gi|288945982|gb|ADC73679.1| prolyl-tRNA synthetase [Dehalococcoides sp. GT]
          Length = 569

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 98/210 (46%), Gaps = 20/210 (9%)

Query: 218 SRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQ 277
           SR++G    TQ+E+        ++E   H+ L R      IA+  +GV  +    W+  Q
Sbjct: 4   SRLFG---KTQREIPS------DAETISHQLLLRSG---MIAQLTAGVYSFMPLAWRSIQ 51

Query: 278 TLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFAL 336
            + + +R+++ K   +E+  P +    +WQQSG    +   +F +K   D         L
Sbjct: 52  KIENIIRQEMNKAGCQELAMPVLQPVEIWQQSGREAPFGQTLFHLKDRKD-----HNLVL 106

Query: 337 KPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-C 395
            P +      + +  ++SYR+LP RL +  + +R+EP     GL+RVR F   D + F  
Sbjct: 107 GPTHEEVITDLASRYIQSYRDLPQRLYQIQAKFRDEPR-PRGGLIRVREFIMKDMYSFDA 165

Query: 396 TKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
           + E + +    +     S+Y+  G E +++
Sbjct: 166 SPEGLDDSYQTMKQAYESVYRRCGLESMVI 195


>gi|226223920|ref|YP_002758027.1| prolyl-tRNA synthetase [Listeria monocytogenes Clip81459]
 gi|259511604|sp|C1L2M5|SYP_LISMC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|225876382|emb|CAS05091.1| prolyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           CLIP 80459]
          Length = 568

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 75/169 (44%), Gaps = 16/169 (9%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKI----KDDYEEINTPQVL-----DQHLWQQSGHWDS 313
           +G I     G   +  L + M RKI    +++ E I   ++L        LWQ+SG W+ 
Sbjct: 29  AGFIRQTASGIYSYLPLATLMLRKIETIIREELEAIGAAELLMPALQPAELWQESGRWND 88

Query: 314 YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP 373
           Y   +  +K      +  R FAL P +     A+    +KSY+ LP+ L +  + +R+E 
Sbjct: 89  YGPELMRLKD-----RASRDFALGPTHEEVITALLRDEVKSYKRLPLTLYQIQTKFRDEK 143

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI-HNLIISIYKDFGFE 421
                GL+R R F   DA+ F    +  +E   + H    +I+   G E
Sbjct: 144 RPRF-GLLRGREFIMKDAYSFHATSESLDEVYNLMHQAYSNIFTRCGLE 191


>gi|332282869|ref|ZP_08395282.1| prolyl-tRNA synthetase [Shigella sp. D9]
 gi|332105221|gb|EGJ08567.1| prolyl-tRNA synthetase [Shigella sp. D9]
          Length = 590

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/192 (23%), Positives = 86/192 (44%), Gaps = 10/192 (5%)

Query: 217 LSRIYGTAWN-TQQELTQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGW 273
           L  +  + WN      +QYL    +    D   ++ ++ L    I +  SG+  W   G 
Sbjct: 6   LEPVLPSNWNRNNMRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGV 65

Query: 274 KIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           ++ + + + +R ++ +    E++ P V    LWQ+SG W+ Y   +   +  D   +  R
Sbjct: 66  RVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELL--RFVD---RGER 120

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
            F L P +      +  + L SY++LP+   +  + +R+E      G+MR R F   DA+
Sbjct: 121 PFVLGPTHEEVITDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRF-GVMRSREFLMKDAY 179

Query: 393 VFCTKEQMFNEC 404
            F T ++   E 
Sbjct: 180 SFHTSQESLQET 191


>gi|319900832|ref|YP_004160560.1| uridine kinase [Bacteroides helcogenes P 36-108]
 gi|319415863|gb|ADV42974.1| uridine kinase [Bacteroides helcogenes P 36-108]
          Length = 557

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/193 (23%), Positives = 89/193 (46%), Gaps = 3/193 (1%)

Query: 15  KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVI 73
           K F + ++  ++    + +   + V+  +N +   L+  V     +E +   D   +   
Sbjct: 16  KEFTIGSSLLEIYYGFNLNFPYQVVSAKVNNRSEGLNFRVYNNKDVEFLDVRDSSGMRTY 75

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
             S   I+ +AV  ++PE ++ +   +  G++ +    +P   +++A I+K+MQEIIA D
Sbjct: 76  VRSLCFILYKAVNELFPEGKLFVEHPVSKGYFCNLRLGRPIELEDVAAIKKRMQEIIAED 135

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQ 193
            P+ +      +A  +F  +    KV++LE+         Y  G+  D   G  + STG 
Sbjct: 136 IPYHRVECHTAEAVRIFSERGMNDKVKLLET-SGSLYTYYYMLGDTVDYYYGNLLPSTGF 194

Query: 194 VKKFFKLMKVAGA 206
           V K F ++K  G 
Sbjct: 195 V-KMFDIVKYYGG 206


>gi|290968110|ref|ZP_06559655.1| proline--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
 gi|290781785|gb|EFD94368.1| proline--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
          Length = 575

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 64/142 (45%), Gaps = 18/142 (12%)

Query: 270 RKGWKIFQTLISYMRRKI------------KDDYEEINTPQVLDQHLWQQSGHWDSYRAN 317
           RK    F + +   RR +            K   +EI  P V    +WQ+SG WD Y   
Sbjct: 33  RKNASGFYSFLPLARRSVLKIEKIIREEMDKTGAQEIMMPIVQPAEIWQESGRWDVYGKE 92

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           MF  K AD   +    + L P +      +  + L+SY++LPV L +  + YR+E     
Sbjct: 93  MF--KLAD---RHGNEYCLAPTHEELITTLVRNELRSYKQLPVNLYQIQNKYRDEIRPRF 147

Query: 378 HGLMRVRGFTQDDAHVFCTKEQ 399
            GLMR R F   D++ F T ++
Sbjct: 148 -GLMRSREFVMQDSYSFDTDQE 168


>gi|322515550|ref|ZP_08068532.1| proline--tRNA ligase [Actinobacillus ureae ATCC 25976]
 gi|322118393|gb|EFX90656.1| proline--tRNA ligase [Actinobacillus ureae ATCC 25976]
          Length = 571

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 92/202 (45%), Gaps = 10/202 (4%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-K 288
           +QYL+   +    D + ++ ++ L    I    SG+  W   G K+ + + + +R ++ K
Sbjct: 4   SQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMASGLYNWLPTGIKVLKKVENIIREEMNK 63

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
               E+  P V    LWQ+SG W+ Y A +   +  D   +  R F L P +      + 
Sbjct: 64  GGAIEVLMPVVQPAELWQESGRWNDYGAELL--RFVD---RGSRDFVLGPTHEEVITDLV 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI- 407
              + SY++LP+ L +  + +R+E      G+MR R F   DA+ F  ++    E   + 
Sbjct: 119 RREVSSYKQLPLNLYQIQTKFRDEVRPRF-GVMRSREFVMKDAYSFHVEKASLQETYDVM 177

Query: 408 HNLIISIYKDFGFEKIMVKLST 429
           + +  +I+   G +   V+  T
Sbjct: 178 YQVYSNIFTRLGLDFRAVQADT 199


>gi|251793646|ref|YP_003008376.1| prolyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
 gi|247535043|gb|ACS98289.1| hypothetical protein NT05HA_1971 [Aggregatibacter aphrophilus
           NJ8700]
          Length = 571

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 76/170 (44%), Gaps = 8/170 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ K    E+  P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYNWLPTGLRVLKKVENIIRDEMNKSGAIEVEMPVVQPAELWQESGRWEQYGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +   +     R F L P +      +    + SYR+LP+ L +  + +R+E      G+
Sbjct: 96  FEDRGN-----RNFVLGPTHEEVITDLVRREVSSYRQLPLNLYQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKI-HNLIISIYKDFGFEKIMVKLST 429
           MR R F   DA+ F T ++   E   + +    +I+   G +   V+  T
Sbjct: 150 MRGREFLMKDAYSFHTSKESLQETYDVMYQTYSNIFSRLGLDFRAVQADT 199


>gi|332534597|ref|ZP_08410430.1| prolyl-tRNA synthetase [Pseudoalteromonas haloplanktis ANT/505]
 gi|332035947|gb|EGI72427.1| prolyl-tRNA synthetase [Pseudoalteromonas haloplanktis ANT/505]
          Length = 574

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 75/161 (46%), Gaps = 8/161 (4%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG+  W   G ++ + + + +R ++ K    E+  P +    LW++SG W     N F  
Sbjct: 37  SGLYTWLPSGLRVLRKVENIVREEMDKAGAIEMLMPVIQPADLWEESGRW-----NEFGP 91

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           +    T +  RTFAL P +           + SY++LPV L +  +  R+E      G+M
Sbjct: 92  ELMRFTDRHNRTFALGPTHEEVITDFVRKEISSYKQLPVTLYQVQTKVRDERRPRF-GVM 150

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDFGFE 421
           R R FT  DA+ F   E+  +   + +H    +I++  G +
Sbjct: 151 RAREFTMKDAYSFHLSEECLDATYQAMHKAYCNIFERLGLD 191


>gi|94676512|ref|YP_589036.1| prolyl-tRNA synthetase [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
 gi|114152171|sp|Q1LSM8|SYP_BAUCH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|94219662|gb|ABF13821.1| prolyl-tRNA synthetase [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
          Length = 557

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 70/143 (48%), Gaps = 7/143 (4%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  SG+  W   G +I + + + +R ++ +    E++ P V   +LW +SG W  Y  
Sbjct: 32  IRQLASGLYTWLPTGLRILRKVENIVREEMNNIGAIEVSMPIVQPANLWLESGRWGQYGP 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            +        T +  R F L P +      +  + +KSY++LP+ L +  + +R+E    
Sbjct: 92  ELLRF-----TDRSTRQFLLGPTHEEVITDLIRNEVKSYKQLPLNLFQIKTKFRDEVRPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQ 399
            +G+MR R F   DA+ F T +Q
Sbjct: 147 -YGVMRSREFIMKDAYSFHTSQQ 168


>gi|290893569|ref|ZP_06556552.1| prolyl-tRNA synthetase [Listeria monocytogenes FSL J2-071]
 gi|290556914|gb|EFD90445.1| prolyl-tRNA synthetase [Listeria monocytogenes FSL J2-071]
          Length = 568

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 83/192 (43%), Gaps = 27/192 (14%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI----KDDYEEIN 295
           ++E + H+ L R           +G I     G   +  L + M RKI    +++ E I 
Sbjct: 17  DAEVKSHQLLLR-----------AGFIRQTASGIYSYLPLATLMLRKIETIIREELEAIG 65

Query: 296 TPQVL-----DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH 350
             ++L        LWQ+SG W+ Y   +  +K      +  R FAL P +     A+   
Sbjct: 66  AAELLMPALQPAELWQESGRWNDYGPELMRLKD-----RASRDFALGPTHEEVITALLRD 120

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI-HN 409
            +KSY+ LP+ L +  + +R+E      GL+R R F   DA+ F    +  +E   + H 
Sbjct: 121 EVKSYKRLPLTLYQIQTKFRDEKRPRF-GLLRGREFIMKDAYSFHATSESLDEVYNLMHQ 179

Query: 410 LIISIYKDFGFE 421
              +I+   G E
Sbjct: 180 AYSNIFTRCGLE 191


>gi|293390782|ref|ZP_06635116.1| prolyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D7S-1]
 gi|290951316|gb|EFE01435.1| prolyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D7S-1]
          Length = 571

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 76/170 (44%), Gaps = 8/170 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ K    E+  P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYNWLPTGLRVLKKVENIIRDEMNKSGAIEVEMPVVQPAELWQESGRWEQYGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +   +     R F L P +      +    + SYR+LP+ L +  + +R+E      G+
Sbjct: 96  FEDRGN-----RNFVLGPTHEEVITDLVRREVSSYRQLPLNLYQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKI-HNLIISIYKDFGFEKIMVKLST 429
           MR R F   DA+ F T ++   E   + +    +I+   G +   V+  T
Sbjct: 150 MRGREFLMKDAYSFHTSKESLQETYDVMYQTYSNIFTRLGLDFRAVQADT 199


>gi|237749052|ref|ZP_04579532.1| prolyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
 gi|229380414|gb|EEO30505.1| prolyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
          Length = 587

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/162 (25%), Positives = 74/162 (45%), Gaps = 8/162 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           GSG+  +   G ++   + + +R ++ +    E+  P V    LWQ++G W  Y   +  
Sbjct: 44  GSGIYAYMPMGLRVIHKIENIIREEMNRAGAVELLMPLVQPAELWQETGRWQKYGPELLR 103

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +K   D     R F ++P +      +  + +KSYR+LP+      + +R+E      GL
Sbjct: 104 IKDRHD-----RDFIIQPTSEEVITDIARNVIKSYRQLPINFYHIQTKFRDERRPRF-GL 157

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKI-HNLIISIYKDFGFE 421
           MR R FT  DA+ F        +  +I  +  + I+  FG +
Sbjct: 158 MRGREFTMKDAYSFDRDVDGLKKSYQIMFDAYVKIFTRFGLK 199


>gi|217964534|ref|YP_002350212.1| prolyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|254782905|sp|B8DG08|SYP_LISMH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|217333804|gb|ACK39598.1| prolyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|307570900|emb|CAR84079.1| proS [Listeria monocytogenes L99]
          Length = 568

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 83/192 (43%), Gaps = 27/192 (14%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI----KDDYEEIN 295
           ++E + H+ L R           +G I     G   +  L + M RKI    +++ E I 
Sbjct: 17  DAEVKSHQLLLR-----------AGFIRQTASGIYSYLPLATLMLRKIETIIREELEAIG 65

Query: 296 TPQVL-----DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH 350
             ++L        LWQ+SG W+ Y   +  +K      +  R FAL P +     A+   
Sbjct: 66  AAELLMPALQPAELWQESGRWNDYGPELMRLKD-----RASRDFALGPTHEEVITALLRD 120

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI-HN 409
            +KSY+ LP+ L +  + +R+E      GL+R R F   DA+ F    +  +E   + H 
Sbjct: 121 EVKSYKRLPLTLYQIQTKFRDEKRPRF-GLLRGREFIMKDAYSFHATSESLDEVYNLMHQ 179

Query: 410 LIISIYKDFGFE 421
              +I+   G E
Sbjct: 180 AYSNIFTRCGLE 191


>gi|146283154|ref|YP_001173307.1| prolyl-tRNA synthetase [Pseudomonas stutzeri A1501]
 gi|166980144|sp|A4VNB4|SYP_PSEU5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|145571359|gb|ABP80465.1| prolyl-tRNA synthetase [Pseudomonas stutzeri A1501]
          Length = 571

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/161 (24%), Positives = 71/161 (44%), Gaps = 8/161 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G +  +   + +R ++ K    E+  P +    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYTWMPMGLRALRKAEAIVREEMNKAGALEVLMPAIQPAELWQESGRWEQYGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +K   D     R F + P +      +  + L SY++LP+   +  + +R+E      GL
Sbjct: 96  LKDRHD-----REFCVGPTHEEVITDLARNELNSYKQLPINFYQIQTKFRDEIRPRF-GL 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGF 420
           MR R F   DA+ F   ++   E   ++H    +I+   G 
Sbjct: 150 MRGREFLMKDAYSFHLNQESLQETYDRMHQAYCNIFTRLGL 190


>gi|329905673|ref|ZP_08274169.1| Prolyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480]
 gi|327547550|gb|EGF32358.1| Prolyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480]
          Length = 578

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 74/161 (45%), Gaps = 8/161 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           GSG+  +   G ++ + + + +R ++ +    E+  P V    LWQ++G W  Y A +  
Sbjct: 36  GSGIYTYMPMGLRVIRKVEAIVREEMNRAGAVELLMPVVQPAELWQETGRWQEYGAELMR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           VK      +  R F ++P +      +    +KSYR+LPV      + +R+E      GL
Sbjct: 96  VKD-----RHGRDFIIQPTSEEVITDIARTEIKSYRQLPVNFYHVQTKFRDERRPRF-GL 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKI-HNLIISIYKDFGF 420
           MR R FT  DA+ F        +  +I  +  + I+  FG 
Sbjct: 150 MRGREFTMKDAYSFDRDPAGMKQSYQIMFDAYVRIFTRFGL 190


>gi|153931197|ref|YP_001382600.1| putative threonyl-tRNA synthetase/uridine kinase [Clostridium
           botulinum A str. ATCC 19397]
 gi|153937058|ref|YP_001386152.1| putative threonyl-tRNA synthetase/uridine kinase [Clostridium
           botulinum A str. Hall]
 gi|152927241|gb|ABS32741.1| putative threonyl-tRNA synthetase/uridine kinase [Clostridium
           botulinum A str. ATCC 19397]
 gi|152932972|gb|ABS38471.1| putative threonyl-tRNA synthetase/uridine kinase [Clostridium
           botulinum A str. Hall]
          Length = 552

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 86/194 (44%), Gaps = 2/194 (1%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           +KL  P+GS        T  DV +          V   I+ +  +L+  V+ EG    + 
Sbjct: 4   LKLYMPNGSNILASGDKTLYDVVKENKLQDNIPIVLGKIDEEYYELTSTVKKEGVFIPVD 63

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
             D   L     +   I  +AV  ++PE  V I   +  G Y +  K    + +++ +I+
Sbjct: 64  ITDSMGLKTYVRTLQFIFIKAVLDLYPESTVVIEHSLGKGLYGEIHKTLSLNENDILKIK 123

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M EII +D    K  +  E+A E+F   K   KV +L  IP +E V LY   E +D  
Sbjct: 124 NRMNEIINKDIKIKKISVKKERAIEIFNEYKMKDKVRLLNHIPHEE-VKLYELDERYDYF 182

Query: 184 RGPHVRSTGQVKKF 197
            GP   STG +K F
Sbjct: 183 YGPMAYSTGAIKNF 196


>gi|110679927|ref|YP_682934.1| alanyl-tRNA synthetase [Roseobacter denitrificans OCh 114]
 gi|123065511|sp|Q165U5|SYA_ROSDO RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|109456043|gb|ABG32248.1| alanyl-tRNA synthetase [Roseobacter denitrificans OCh 114]
          Length = 885

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 68/143 (47%), Gaps = 8/143 (5%)

Query: 66  DPRSLAVIR--HSCAHIMAEAVQSIWPEVQVAIGPI-IEDGFYYDFDKEQPFSSDELAQI 122
           DP     IR  HS  H++ EA++    +     G +  ED   +DF   Q  S +ELA++
Sbjct: 551 DPARRTAIRANHSATHLLHEALREALGDHVAQRGSLNAEDRLRFDFSHTQALSHEELARV 610

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESK--KEAYKVEI-LESIPAKENVTLYRQGEW 179
           E  +   I +++P   + ++ + AREL       E Y  E+ + S+  KE       G+ 
Sbjct: 611 EADVNAYIRQNAPVETRIMTPDAARELGAQALFGEKYGDEVRVVSMGRKEGSGKGLSGDT 670

Query: 180 F--DLCRGPHVRSTGQVKKFFKL 200
           +  +LC G HVR TG +  F  L
Sbjct: 671 YSLELCGGTHVRQTGDIGAFVTL 693


>gi|46907545|ref|YP_013934.1| prolyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|47093943|ref|ZP_00231680.1| prolyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
 gi|254824622|ref|ZP_05229623.1| prolyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
 gi|254852630|ref|ZP_05241978.1| prolyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|255522074|ref|ZP_05389311.1| prolyl-tRNA synthetase [Listeria monocytogenes FSL J1-175]
 gi|300765441|ref|ZP_07075423.1| prolyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
 gi|81830231|sp|Q720A3|SYP_LISMF RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|46880813|gb|AAT04111.1| prolyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|47017681|gb|EAL08477.1| prolyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
 gi|258605946|gb|EEW18554.1| prolyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|293593860|gb|EFG01621.1| prolyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
 gi|300513878|gb|EFK40943.1| prolyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
 gi|328468602|gb|EGF39602.1| prolyl-tRNA synthetase [Listeria monocytogenes 1816]
          Length = 568

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 75/169 (44%), Gaps = 16/169 (9%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKI----KDDYEEINTPQVL-----DQHLWQQSGHWDS 313
           +G I     G   +  L + M RKI    +++ E I   ++L        LWQ+SG W+ 
Sbjct: 29  AGFIRQTASGIYSYLPLATLMLRKIETIIREELEAIGAAELLMPALQPAELWQESGRWND 88

Query: 314 YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP 373
           Y   +  +K      +  R FAL P +     A+    +KSY+ LP+ L +  + +R+E 
Sbjct: 89  YGPELMRLKD-----RASRDFALGPTHEEVITALLRDEVKSYKRLPLTLYQIQTKFRDEK 143

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI-HNLIISIYKDFGFE 421
                GL+R R F   DA+ F    +  +E   + H    +I+   G E
Sbjct: 144 RPRF-GLLRGREFIMKDAYSFHATSESLDEVYNLMHQAYSNIFTRCGLE 191


>gi|261867437|ref|YP_003255359.1| prolyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D11S-1]
 gi|261412769|gb|ACX82140.1| prolyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D11S-1]
          Length = 571

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 76/170 (44%), Gaps = 8/170 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ K    E+  P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYNWLPTGLRVLKKVENIIRDEMNKSGAIEVEMPVVQPAELWQESGRWEQYGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +   +     R F L P +      +    + SYR+LP+ L +  + +R+E      G+
Sbjct: 96  FEDRGN-----RNFVLGPTHEEVITDLVRREVSSYRQLPLNLYQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKI-HNLIISIYKDFGFEKIMVKLST 429
           MR R F   DA+ F T ++   E   + +    +I+   G +   V+  T
Sbjct: 150 MRGREFLMKDAYSFHTSKESLQETYDVMYQTYSNIFTRLGLDFRAVQADT 199


>gi|225719338|gb|ACO15515.1| Mitochondrial 39S ribosomal protein L39 [Caligus clemensi]
          Length = 330

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 91/191 (47%), Gaps = 22/191 (11%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI----EIITPEDPRSL-AVIRH 75
           +T  + A+ I  SL +++    +N ++ D++ P+ E SI        PEDP  L      
Sbjct: 79  STPFNAAQHIHVSLIERSALATVNDQLWDMNRPLEEDSIVKFIHFQQPEDPYHLNKAFWR 138

Query: 76  SCAHIMAEAVQSIWP-----EVQVAIGPIIEDG-FYYDFDKE----QPFSSDELAQIEKK 125
           SC+ ++   +++++      E+     P ++ G F YD D +     P S +EL      
Sbjct: 139 SCSFMLGVTLENLFQDNYFIELHSFPAPNVQSGSFVYDADLKFLDWTP-SKEELMSFGAY 197

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK----ENVTLYRQGEWFD 181
           M  +  ++ PF +  +    A+ +FE  +  YK + + SI A      +VTLYR GE  D
Sbjct: 198 MHRLSEKELPFERLTVDTSVAQRIFEDNQ--YKSKQIPSIAANSKSGNSVTLYRLGEHVD 255

Query: 182 LCRGPHVRSTG 192
           +  GP V ++G
Sbjct: 256 ISGGPMVGNSG 266


>gi|254932366|ref|ZP_05265725.1| prolyl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|293583922|gb|EFF95954.1| prolyl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|328475041|gb|EGF45829.1| prolyl-tRNA synthetase [Listeria monocytogenes 220]
 gi|332311762|gb|EGJ24857.1| Prolyl-tRNA synthetase [Listeria monocytogenes str. Scott A]
          Length = 568

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 75/169 (44%), Gaps = 16/169 (9%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKI----KDDYEEINTPQVL-----DQHLWQQSGHWDS 313
           +G I     G   +  L + M RKI    +++ E I   ++L        LWQ+SG W+ 
Sbjct: 29  AGFIRQTASGIYSYLPLATLMLRKIETIIREELEAIGAAELLMPALQPAELWQESGRWND 88

Query: 314 YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP 373
           Y   +  +K      +  R FAL P +     A+    +KSY+ LP+ L +  + +R+E 
Sbjct: 89  YGPELMRLKD-----RASRDFALGPTHEEVITALLRDEVKSYKRLPLTLYQIQTKFRDEK 143

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI-HNLIISIYKDFGFE 421
                GL+R R F   DA+ F    +  +E   + H    +I+   G E
Sbjct: 144 RPRF-GLLRGREFIMKDAYSFHATSESLDEVYNLMHQAYSNIFTRCGLE 191


>gi|16803359|ref|NP_464844.1| prolyl-tRNA synthetase [Listeria monocytogenes EGD-e]
 gi|224501738|ref|ZP_03670045.1| prolyl-tRNA synthetase [Listeria monocytogenes FSL R2-561]
 gi|81849855|sp|Q8Y7G2|SYP_LISMO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|16410735|emb|CAC99397.1| prolyl-tRNA synthetase [Listeria monocytogenes EGD-e]
          Length = 568

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 83/192 (43%), Gaps = 27/192 (14%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI----KDDYEEIN 295
           ++E + H+ L R           +G I     G   +  L + M RKI    +++ E I 
Sbjct: 17  DAEVKSHQLLLR-----------AGFIRQTASGIYSYLPLATLMLRKIETIIREELEAIG 65

Query: 296 TPQVL-----DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH 350
             ++L        LWQ+SG W+ Y   +  +K      +  R FAL P +     A+   
Sbjct: 66  AAELLMPALQPAELWQESGRWNDYGPELMRLKD-----RASRDFALGPTHEEVITALLRD 120

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI-HN 409
            +KSY+ LP+ L +  + +R+E      GL+R R F   DA+ F    +  +E   + H 
Sbjct: 121 EVKSYKRLPLTLYQIQTKFRDEKRPRF-GLLRGREFIMKDAYSFHATSESLDEVYNLMHQ 179

Query: 410 LIISIYKDFGFE 421
              +I+   G E
Sbjct: 180 AYSNIFTRCGLE 191


>gi|114331243|ref|YP_747465.1| prolyl-tRNA synthetase [Nitrosomonas eutropha C91]
 gi|123026746|sp|Q0AGN2|SYP_NITEC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|114308257|gb|ABI59500.1| prolyl-tRNA synthetase [Nitrosomonas eutropha C91]
          Length = 568

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 69/156 (44%), Gaps = 10/156 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQ 298
           E+E   HR + R      I   GSG+  W   G +I   +   +R ++      E+  P 
Sbjct: 17  EAELASHRLMLRAG---LIKRLGSGLYTWMPLGLRILHKIEHIIREEMNSSGALELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    LWQ+SG WD +   M  ++  D    D   F   P +    V +    +KSYR+L
Sbjct: 74  VHPAELWQESGRWDVFGPQMLKIQ--DRHQHD---FCFGPTHEEVIVDIARREIKSYRQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           P+   +  + +R+E      G+MR R F   DA+ F
Sbjct: 129 PINFYQIQTKFRDEIRPRF-GVMRAREFIMKDAYSF 163


>gi|254037614|ref|ZP_04871691.1| prolyl-tRNA synthetase [Escherichia sp. 1_1_43]
 gi|226840720|gb|EEH72722.1| prolyl-tRNA synthetase [Escherichia sp. 1_1_43]
          Length = 590

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/192 (23%), Positives = 86/192 (44%), Gaps = 10/192 (5%)

Query: 217 LSRIYGTAWN-TQQELTQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGW 273
           L  +  + WN      +QYL    +    D   ++ ++ L    I +  SG+  W   G 
Sbjct: 6   LEPVLPSNWNRNNMRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGV 65

Query: 274 KIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           ++ + + + +R ++ +    E++ P V    LWQ+SG W+ Y   +   +  D   +  R
Sbjct: 66  RVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELL--RFVD---RGER 120

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
            F L P +      +  + L SY++LP+   +  + +R+E      G+MR R F   DA+
Sbjct: 121 PFVLGPTHEEVITDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRF-GVMRSREFLMKDAY 179

Query: 393 VFCTKEQMFNEC 404
            F T ++   E 
Sbjct: 180 SFHTSQESLQET 191


>gi|169342484|ref|ZP_02863541.1| phosphoribulokinase [Clostridium perfringens C str. JGS1495]
 gi|169299382|gb|EDS81448.1| phosphoribulokinase [Clostridium perfringens C str. JGS1495]
          Length = 551

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 76/146 (52%), Gaps = 2/146 (1%)

Query: 56  EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFS 115
           +G IE++   DP        +   +  +A   ++ + ++ I   I  G + +  KE+   
Sbjct: 55  DGDIELVNISDPHGKIAYSRTLQFVFIKATLDLFKDARINIEHSISKGTFGEIHKEKALD 114

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            +++ +I+KKMQEII ++    K  +  ++A ++F+S K   KV++L  +  +E V LY+
Sbjct: 115 EEDILKIKKKMQEIIDKNIIIEKIKMPRKEAIDIFKSYKMKDKVDLLHWV-QEEYVNLYK 173

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLM 201
             + +D   G    STG V K+F L+
Sbjct: 174 LEDRYDYFYGDMAYSTG-VLKYFDLL 198


>gi|315032880|gb|EFT44812.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0017]
 gi|315150170|gb|EFT94186.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0012]
          Length = 572

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/167 (24%), Positives = 79/167 (47%), Gaps = 8/167 (4%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYR 315
           +I +  +G+  +     ++ + L + MR +  K D  E+  P +L   LW++SG +++Y 
Sbjct: 31  YIRQVAAGIYSYLPLANRVLEKLKTIMREEFEKIDAVEMLMPALLPAELWKESGRYETYG 90

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            N++ +K  +D     R + L P +      +    + SY+ LP+ L +  + YR+E   
Sbjct: 91  PNLYRLKDRND-----RDYILGPTHEETFTELIRDEINSYKRLPLNLYQIQTKYRDEKR- 144

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS-IYKDFGFE 421
              GL+R R F   D + F   E   ++  + +    S I++  G E
Sbjct: 145 PRSGLLRGREFIMKDGYSFHADEASLDQSYRDYEKAYSRIFERCGLE 191


>gi|254828679|ref|ZP_05233366.1| prolyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
 gi|254829924|ref|ZP_05234579.1| prolyl-tRNA synthetase [Listeria monocytogenes 10403S]
 gi|254898516|ref|ZP_05258440.1| prolyl-tRNA synthetase [Listeria monocytogenes J0161]
 gi|254911993|ref|ZP_05262005.1| prolyl-tRNA synthetase [Listeria monocytogenes J2818]
 gi|254936320|ref|ZP_05268017.1| prolyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|284801704|ref|YP_003413569.1| prolyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284994846|ref|YP_003416614.1| prolyl-tRNA synthetase [Listeria monocytogenes 08-5923]
 gi|258601083|gb|EEW14408.1| prolyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
 gi|258608910|gb|EEW21518.1| prolyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|284057266|gb|ADB68207.1| prolyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284060313|gb|ADB71252.1| prolyl-tRNA synthetase [Listeria monocytogenes 08-5923]
 gi|293589957|gb|EFF98291.1| prolyl-tRNA synthetase [Listeria monocytogenes J2818]
          Length = 568

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 75/169 (44%), Gaps = 16/169 (9%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKI----KDDYEEINTPQVL-----DQHLWQQSGHWDS 313
           +G I     G   +  L + M RKI    +++ E I   ++L        LWQ+SG W+ 
Sbjct: 29  AGFIRQTASGIYSYLPLATLMLRKIETIIREELEAIGAAELLMPALQPAELWQESGRWND 88

Query: 314 YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP 373
           Y   +  +K      +  R FAL P +     A+    +KSY+ LP+ L +  + +R+E 
Sbjct: 89  YGPELMRLKD-----RASRDFALGPTHEEVITALLRDEVKSYKRLPLTLYQIQTKFRDEK 143

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI-HNLIISIYKDFGFE 421
                GL+R R F   DA+ F    +  +E   + H    +I+   G E
Sbjct: 144 RPRF-GLLRGREFIMKDAYSFHATSESLDEVYNLMHQAYSNIFTRCGLE 191


>gi|257084658|ref|ZP_05579019.1| prolyl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|256992688|gb|EEU79990.1| prolyl-tRNA synthetase [Enterococcus faecalis Fly1]
          Length = 572

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/167 (24%), Positives = 79/167 (47%), Gaps = 8/167 (4%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYR 315
           +I +  +G+  +     ++ + L + MR +  K D  E+  P +L   LW++SG +++Y 
Sbjct: 31  YIRQVAAGIYSYLPLANRVLEKLKTIMREEFEKIDAVEMLMPALLPAELWKESGRYETYG 90

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            N++ +K  +D     R + L P +      +    + SY+ LP+ L +  + YR+E   
Sbjct: 91  PNLYRLKDRND-----RDYILGPTHEETFTELIRDEINSYKRLPLNLYQIQTKYRDEKR- 144

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS-IYKDFGFE 421
              GL+R R F   D + F   E   ++  + +    S I++  G E
Sbjct: 145 PRSGLLRGREFIMKDGYSFHADEASLDQSYRDYEKAYSRIFERCGLE 191


>gi|254992869|ref|ZP_05275059.1| prolyl-tRNA synthetase [Listeria monocytogenes FSL J2-064]
          Length = 568

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 75/169 (44%), Gaps = 16/169 (9%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKI----KDDYEEINTPQVL-----DQHLWQQSGHWDS 313
           +G I     G   +  L + M RKI    +++ E I   ++L        LWQ+SG W+ 
Sbjct: 29  AGFIRQTASGIYSYLPLATLMLRKIETIIREELEAIGAAELLMPALQPAELWQESGRWND 88

Query: 314 YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP 373
           Y   +  +K      +  R FAL P +     A+    +KSY+ LP+ L +  + +R+E 
Sbjct: 89  YGPELMRLKD-----RASRDFALGPTHEEVITALLRDEVKSYKRLPLTLYQIQTKFRDEK 143

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI-HNLIISIYKDFGFE 421
                GL+R R F   DA+ F    +  +E   + H    +I+   G E
Sbjct: 144 RPRF-GLLRGREFIMKDAYSFHATSESLDEVYNLMHQAYSNIFTRCGLE 191


>gi|256956661|ref|ZP_05560832.1| prolyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|257090544|ref|ZP_05584905.1| prolyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|300861128|ref|ZP_07107215.1| proline--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|312903702|ref|ZP_07762876.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|256947157|gb|EEU63789.1| prolyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|256999356|gb|EEU85876.1| prolyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|300850167|gb|EFK77917.1| proline--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|310632894|gb|EFQ16177.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|315035640|gb|EFT47572.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0027]
 gi|315578695|gb|EFU90886.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0630]
          Length = 572

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/167 (24%), Positives = 79/167 (47%), Gaps = 8/167 (4%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYR 315
           +I +  +G+  +     ++ + L + MR +  K D  E+  P +L   LW++SG +++Y 
Sbjct: 31  YIRQVAAGIYSYLPLANRVLEKLKTIMREEFEKIDAVEMLMPALLPAELWKESGRYETYG 90

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            N++ +K  +D     R + L P +      +    + SY+ LP+ L +  + YR+E   
Sbjct: 91  PNLYRLKDRND-----RDYILGPTHEETFTELIRDEINSYKRLPLNLYQIQTKYRDEKR- 144

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS-IYKDFGFE 421
              GL+R R F   D + F   E   ++  + +    S I++  G E
Sbjct: 145 PRSGLLRGREFIMKDGYSFHADEASLDQSYRDYEKAYSRIFERCGLE 191


>gi|332983243|ref|YP_004464684.1| prolyl-tRNA synthetase [Mahella australiensis 50-1 BON]
 gi|332700921|gb|AEE97862.1| prolyl-tRNA synthetase [Mahella australiensis 50-1 BON]
          Length = 569

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 76/156 (48%), Gaps = 10/156 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+E   H+ + R   +  +A   SG+  +   G ++ + +   +R ++ K   +EI    
Sbjct: 17  EAEIPSHQLMLRAGLMRKLA---SGIYNYLPLGKRVLKKVEEIVREEMDKTGAQEILASA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L   LW+++G WD +   MF +K  ++     R F L P +      +  + +KSY++L
Sbjct: 74  LLPAELWKETGRWDVFGPEMFKLKDRNE-----REFCLGPTHEEIFTDIVRNEIKSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           P  L +  + YR+E      G+MR R F   DA+ F
Sbjct: 129 PFNLYQIQTKYRDEKRPRF-GVMRSREFIMKDAYSF 163


>gi|224499901|ref|ZP_03668250.1| prolyl-tRNA synthetase [Listeria monocytogenes Finland 1988]
          Length = 568

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 83/192 (43%), Gaps = 27/192 (14%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI----KDDYEEIN 295
           ++E + H+ L R           +G I     G   +  L + M RKI    +++ E I 
Sbjct: 17  DAEVKSHQLLLR-----------AGFIRQTASGIYSYLPLATLMLRKIETIIREELEAIG 65

Query: 296 TPQVL-----DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH 350
             ++L        LWQ+SG W+ Y   +  +K      +  R FAL P +     A+   
Sbjct: 66  AAELLMPALQPAELWQESGRWNDYGPELMRLKD-----RASRDFALGPTHEEVITALLRD 120

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI-HN 409
            +KSY+ LP+ L +  + +R+E      GL+R R F   DA+ F    +  +E   + H 
Sbjct: 121 EVKSYKRLPLTLYQIQTKFRDEKRPRF-GLLRGREFIMKDAYSFHATSESLDEVYNLMHQ 179

Query: 410 LIISIYKDFGFE 421
              +I+   G E
Sbjct: 180 AYSNIFTRCGLE 191


>gi|325982765|ref|YP_004295167.1| prolyl-tRNA synthetase [Nitrosomonas sp. AL212]
 gi|325532284|gb|ADZ27005.1| prolyl-tRNA synthetase [Nitrosomonas sp. AL212]
          Length = 569

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/155 (25%), Positives = 69/155 (44%), Gaps = 10/155 (6%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
           GSG+  W   G ++ + + + +R ++      EI  P +    LWQ++G WD +   M  
Sbjct: 36  GSGLYTWMPLGLRVLRKIENIIREEMNSSGAVEILMPAIQPAELWQETGRWDVFGLQMLK 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +K      +    F   P +           +KSYR+LP+   +  + +R+E      G+
Sbjct: 96  IKD-----RHKHDFCFGPTHEEIITDTVRKEIKSYRQLPLNFYQIQTKFRDEIRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           MR R F   DA+ F T E   +  ++ + L+   Y
Sbjct: 150 MRAREFIMKDAYSFHTNE---DSLMQTYQLMYETY 181


>gi|229549443|ref|ZP_04438168.1| prolyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
 gi|255972147|ref|ZP_05422733.1| prolyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|257421971|ref|ZP_05598961.1| prolyl-tRNA synthetase [Enterococcus faecalis X98]
 gi|312953422|ref|ZP_07772262.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|229305680|gb|EEN71676.1| prolyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
 gi|255963165|gb|EET95641.1| prolyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|257163795|gb|EEU93755.1| prolyl-tRNA synthetase [Enterococcus faecalis X98]
 gi|310628631|gb|EFQ11914.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|315152090|gb|EFT96106.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0031]
 gi|315155317|gb|EFT99333.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0043]
 gi|315159106|gb|EFU03123.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0312]
 gi|327535671|gb|AEA94505.1| proline--tRNA ligase [Enterococcus faecalis OG1RF]
          Length = 572

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/167 (24%), Positives = 79/167 (47%), Gaps = 8/167 (4%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYR 315
           +I +  +G+  +     ++ + L + MR +  K D  E+  P +L   LW++SG +++Y 
Sbjct: 31  YIRQVAAGIYSYLPLANRVLEKLKTIMREEFEKIDAVEMLMPALLPAELWKESGRYETYG 90

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            N++ +K  +D     R + L P +      +    + SY+ LP+ L +  + YR+E   
Sbjct: 91  PNLYRLKDRND-----RDYILGPTHEETFTELIRDEINSYKRLPLNLYQIQTKYRDEKR- 144

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS-IYKDFGFE 421
              GL+R R F   D + F   E   ++  + +    S I++  G E
Sbjct: 145 PRSGLLRGREFIMKDGYSFHADEASLDQSYRDYEKAYSRIFERCGLE 191


>gi|212697111|ref|ZP_03305239.1| hypothetical protein ANHYDRO_01677 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212675886|gb|EEB35493.1| hypothetical protein ANHYDRO_01677 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 447

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 76/157 (48%), Gaps = 10/157 (6%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
           +++E + H+ L R      I +  SGV  +   G ++   + + +R+ + K D  E++T 
Sbjct: 9   QDAETQSHKLLVRGA---FIRKTSSGVYSYLPLGMRVINKIENIVRKSMEKYDSIEVSTS 65

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +  + +W++SG W ++   MF +K   D     R + L P       ++    L SY++
Sbjct: 66  VLQSKDIWEKSGRWQNFGPEMFKIKDRHD-----REYCLGPTAEEQFTSLIKDELNSYKQ 120

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           LP+ L +  S +R+E      G+ R R F   DA+ F
Sbjct: 121 LPLNLYQIVSKFRDEKRPRF-GINRSRDFIMKDAYSF 156


>gi|227553916|ref|ZP_03983963.1| prolyl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|255975215|ref|ZP_05425801.1| prolyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|256617163|ref|ZP_05474009.1| prolyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|256763073|ref|ZP_05503653.1| prolyl-tRNA synthetase [Enterococcus faecalis T3]
 gi|256961317|ref|ZP_05565488.1| prolyl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|256963555|ref|ZP_05567726.1| prolyl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|257082033|ref|ZP_05576394.1| prolyl-tRNA synthetase [Enterococcus faecalis E1Sol]
 gi|257416590|ref|ZP_05593584.1| prolyl-tRNA synthetase [Enterococcus faecalis AR01/DG]
 gi|257419837|ref|ZP_05596831.1| prolyl-tRNA synthetase [Enterococcus faecalis T11]
 gi|293383602|ref|ZP_06629512.1| proline--tRNA ligase [Enterococcus faecalis R712]
 gi|293387285|ref|ZP_06631842.1| proline--tRNA ligase [Enterococcus faecalis S613]
 gi|307271494|ref|ZP_07552766.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0855]
 gi|307277205|ref|ZP_07558309.1| prolyl-tRNA synthetase [Enterococcus faecalis TX2134]
 gi|307285834|ref|ZP_07565968.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0860]
 gi|312899806|ref|ZP_07759125.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0470]
 gi|312906152|ref|ZP_07765164.1| prolyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
 gi|312909497|ref|ZP_07768352.1| prolyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
 gi|227176902|gb|EEI57874.1| prolyl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|255968087|gb|EET98709.1| prolyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|256596690|gb|EEU15866.1| prolyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|256684324|gb|EEU24019.1| prolyl-tRNA synthetase [Enterococcus faecalis T3]
 gi|256951813|gb|EEU68445.1| prolyl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|256954051|gb|EEU70683.1| prolyl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|256990063|gb|EEU77365.1| prolyl-tRNA synthetase [Enterococcus faecalis E1Sol]
 gi|257158418|gb|EEU88378.1| prolyl-tRNA synthetase [Enterococcus faecalis ARO1/DG]
 gi|257161665|gb|EEU91625.1| prolyl-tRNA synthetase [Enterococcus faecalis T11]
 gi|291079114|gb|EFE16478.1| proline--tRNA ligase [Enterococcus faecalis R712]
 gi|291083322|gb|EFE20285.1| proline--tRNA ligase [Enterococcus faecalis S613]
 gi|295113413|emb|CBL32050.1| prolyl-tRNA synthetase, family II [Enterococcus sp. 7L76]
 gi|306502595|gb|EFM71862.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0860]
 gi|306506135|gb|EFM75301.1| prolyl-tRNA synthetase [Enterococcus faecalis TX2134]
 gi|306511766|gb|EFM80764.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0855]
 gi|310627798|gb|EFQ11081.1| prolyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
 gi|311290170|gb|EFQ68726.1| prolyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
 gi|311293056|gb|EFQ71612.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0470]
 gi|315146006|gb|EFT90022.1| prolyl-tRNA synthetase [Enterococcus faecalis TX2141]
 gi|315146660|gb|EFT90676.1| prolyl-tRNA synthetase [Enterococcus faecalis TX4244]
 gi|315161730|gb|EFU05747.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0645]
 gi|315166430|gb|EFU10447.1| prolyl-tRNA synthetase [Enterococcus faecalis TX1341]
 gi|315170318|gb|EFU14335.1| prolyl-tRNA synthetase [Enterococcus faecalis TX1342]
 gi|315173646|gb|EFU17663.1| prolyl-tRNA synthetase [Enterococcus faecalis TX1346]
 gi|315574384|gb|EFU86575.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0309B]
 gi|315580142|gb|EFU92333.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0309A]
          Length = 572

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/167 (24%), Positives = 79/167 (47%), Gaps = 8/167 (4%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYR 315
           +I +  +G+  +     ++ + L + MR +  K D  E+  P +L   LW++SG +++Y 
Sbjct: 31  YIRQVAAGIYSYLPLANRVLEKLKTIMREEFEKIDAVEMLMPALLPAELWKESGRYETYG 90

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            N++ +K  +D     R + L P +      +    + SY+ LP+ L +  + YR+E   
Sbjct: 91  PNLYRLKDRND-----RDYILGPTHEETFTELIRDEINSYKRLPLNLYQIQTKYRDEKR- 144

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS-IYKDFGFE 421
              GL+R R F   D + F   E   ++  + +    S I++  G E
Sbjct: 145 PRSGLLRGREFIMKDGYSFHADEASLDQSYRDYEKAYSRIFERCGLE 191


>gi|299143351|ref|ZP_07036431.1| proline--tRNA ligase [Peptoniphilus sp. oral taxon 386 str. F0131]
 gi|298517836|gb|EFI41575.1| proline--tRNA ligase [Peptoniphilus sp. oral taxon 386 str. F0131]
          Length = 584

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/171 (23%), Positives = 80/171 (46%), Gaps = 8/171 (4%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  SG+  +   G+K+ + +   +R ++ +   +EI    +  + +W+ S  WD +  
Sbjct: 32  IRKSASGIYTYLPLGYKVIKKVEKIVREEMDRAGSQEILMSAIQPKEIWEASDRWDRFGP 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            MF ++  +D     R F L P        +    +KSY++LP+ L +  + YR+E    
Sbjct: 92  EMFKLRDRND-----REFCLGPTAEEYFTTLIKDEVKSYKQLPLNLYQIQTKYRDEKRPR 146

Query: 377 LHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMVK 426
             G+ R R F+  DA+ F  T E M    ++++     I+   G +  +V+
Sbjct: 147 F-GINRAREFSMKDAYSFDTTPETMQVSYMEMYRAYEKIFDRLGLDYKIVE 196


>gi|229545199|ref|ZP_04433924.1| prolyl-tRNA synthetase [Enterococcus faecalis TX1322]
 gi|256853721|ref|ZP_05559086.1| prolyl-tRNA synthetase [Enterococcus faecalis T8]
 gi|257079587|ref|ZP_05573948.1| prolyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|294779463|ref|ZP_06744861.1| proline--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|307270862|ref|ZP_07552149.1| prolyl-tRNA synthetase [Enterococcus faecalis TX4248]
 gi|307287732|ref|ZP_07567775.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0109]
 gi|307291052|ref|ZP_07570938.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0411]
 gi|229309744|gb|EEN75731.1| prolyl-tRNA synthetase [Enterococcus faecalis TX1322]
 gi|256710664|gb|EEU25707.1| prolyl-tRNA synthetase [Enterococcus faecalis T8]
 gi|256987617|gb|EEU74919.1| prolyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|294453469|gb|EFG21873.1| proline--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|306497901|gb|EFM67432.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0411]
 gi|306501470|gb|EFM70773.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0109]
 gi|306512775|gb|EFM81420.1| prolyl-tRNA synthetase [Enterococcus faecalis TX4248]
 gi|315030982|gb|EFT42914.1| prolyl-tRNA synthetase [Enterococcus faecalis TX4000]
          Length = 572

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/167 (24%), Positives = 79/167 (47%), Gaps = 8/167 (4%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYR 315
           +I +  +G+  +     ++ + L + MR +  K D  E+  P +L   LW++SG +++Y 
Sbjct: 31  YIRQVAAGIYSYLPLANRVLEKLKTIMREEFEKIDAVEMLMPALLPAELWKESGRYETYG 90

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            N++ +K  +D     R + L P +      +    + SY+ LP+ L +  + YR+E   
Sbjct: 91  PNLYRLKDRND-----RDYILGPTHEETFTELIRDEINSYKRLPLNLYQIQTKYRDEKR- 144

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS-IYKDFGFE 421
              GL+R R F   D + F   E   ++  + +    S I++  G E
Sbjct: 145 PRSGLLRGREFIMKDGYSFHADEASLDQSYRDYEKAYSRIFERCGLE 191


>gi|226945724|ref|YP_002800797.1| prolyl-tRNA synthetase [Azotobacter vinelandii DJ]
 gi|259511575|sp|C1DRG4|SYP_AZOVD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226720651|gb|ACO79822.1| prolyl-tRNA synthetase [Azotobacter vinelandii DJ]
          Length = 571

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/161 (24%), Positives = 73/161 (45%), Gaps = 8/161 (4%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG+  W   G +  +   + +R ++ K    E+  P +    LWQ+SG W+ Y   +  +
Sbjct: 37  SGLYTWLPLGLRALRKAEAIVREEMDKAGALEVLMPAIQPAELWQESGRWEQYGPELLRI 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           +      +  R F + P +      +  + L SY++LP+   +  + +R+E      GLM
Sbjct: 97  RD-----RHAREFCVGPTHEEVITDLARNELNSYKQLPINFYQIQTKFRDEIRPRF-GLM 150

Query: 382 RVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFE 421
           R R F   DA+ F  T+E +     ++H    +I+   G E
Sbjct: 151 RGREFLMKDAYSFHLTQESLQETYDRMHQAYCNIFSRLGLE 191


>gi|315164831|gb|EFU08848.1| prolyl-tRNA synthetase [Enterococcus faecalis TX1302]
          Length = 572

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/167 (24%), Positives = 79/167 (47%), Gaps = 8/167 (4%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYR 315
           +I +  +G+  +     ++ + L + MR +  K D  E+  P +L   LW++SG +++Y 
Sbjct: 31  YIRQVAAGIYSYLPLANRVLEKLKTIMREEFEKIDAVEMLMPALLPAELWKESGRYETYG 90

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            N++ +K  +D     R + L P +      +    + SY+ LP+ L +  + YR+E   
Sbjct: 91  PNLYRLKDRND-----RDYILGPTHEETFTELIRDEINSYKRLPLNLYQIQTKYRDEKR- 144

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS-IYKDFGFE 421
              GL+R R F   D + F   E   ++  + +    S I++  G E
Sbjct: 145 PRSGLLRGREFIMKDGYSFHADEASLDQSYRDYEKAYSRIFERCGLE 191


>gi|303326973|ref|ZP_07357415.1| proline--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
 gi|302862961|gb|EFL85893.1| proline--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
          Length = 580

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG+  +   G KI   +   +R +I    ++E+  P V    LW+++G W+ Y   +   
Sbjct: 37  SGLYIYLPLGLKIIDKIARVVREEINASGFQELLMPMVQPADLWKETGRWEHYGKELLRF 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           K      ++ R + L P +      +    ++SYR+LPVRL +  S +R+E      GLM
Sbjct: 97  K-----DRNERDYCLGPTHEEVITDLVRGEVRSYRQLPVRLYQIQSKFRDEIRPRF-GLM 150

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLKI-HNLIISIYKDFGFEKIMVKLST 429
           R R F   D + F        E  K+ ++    I+K  G +   V+  T
Sbjct: 151 RGREFMMKDGYSFDADIAGAEESYKLMYDAYTRIFKRLGLKFRAVEADT 199


>gi|295094821|emb|CBK83912.1| alanyl-tRNA synthetase [Coprococcus sp. ART55/1]
          Length = 887

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/238 (24%), Positives = 101/238 (42%), Gaps = 47/238 (19%)

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSDE 118
           E+    + R+L    HS  H++  A++ +  +     G ++E G   +DF  +Q  + +E
Sbjct: 559 ELTVDAENRALICNNHSATHLLQRALKMVLGDHVEQAGSLVEPGRLRFDFSHDQAMTKEE 618

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTL 173
           + ++E  + E I  D P     +S ++A+E     LF  K               E V +
Sbjct: 619 IKKVEDIVNEQIQLDIPVCTDVMSVDEAKETGAMALFGEK-------------YGEKVRV 665

Query: 174 YRQGEWF-DLCRGPHVRSTGQVKKFFKLMKVAGA-----------------YWRG----- 210
              G++  +LC G HV STG +K  FK++  AG                  Y+R      
Sbjct: 666 VSMGDFSKELCGGTHVASTGAIKT-FKIISEAGVAAGTRRIEALTSVGALDYYRNVEQEL 724

Query: 211 -DSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREM--DLFHIAEDGSGV 265
            D+ +   + IYG A   +Q L +      E++K    K+A+E   D+   A D  G+
Sbjct: 725 MDAAKAAKTDIYGVASRIEQLLAEVKELTNENKKL-KDKMAKEAAGDVLSSAIDKDGI 781


>gi|47096944|ref|ZP_00234521.1| prolyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
 gi|47014704|gb|EAL05660.1| prolyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
          Length = 502

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 83/192 (43%), Gaps = 27/192 (14%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI----KDDYEEIN 295
           ++E + H+ L R           +G I     G   +  L + M RKI    +++ E I 
Sbjct: 17  DAEVKSHQLLLR-----------AGFIRQTASGIYSYLPLATLMLRKIETIIREELEAIG 65

Query: 296 TPQVL-----DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH 350
             ++L        LWQ+SG W+ Y   +  +K      +  R FAL P +     A+   
Sbjct: 66  AAELLMPALQPAELWQESGRWNDYGPELMRLKD-----RASRDFALGPTHEEVITALLRD 120

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI-HN 409
            +KSY+ LP+ L +  + +R+E      GL+R R F   DA+ F    +  +E   + H 
Sbjct: 121 EVKSYKRLPLTLYQIQTKFRDEKRPRF-GLLRGREFIMKDAYSFHATSESLDEVYNLMHQ 179

Query: 410 LIISIYKDFGFE 421
              +I+   G E
Sbjct: 180 AYSNIFTRCGLE 191


>gi|288928843|ref|ZP_06422689.1| phosphoribulokinase family protein [Prevotella sp. oral taxon 317
           str. F0108]
 gi|288329827|gb|EFC68412.1| phosphoribulokinase family protein [Prevotella sp. oral taxon 317
           str. F0108]
          Length = 553

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/180 (21%), Positives = 80/180 (44%), Gaps = 2/180 (1%)

Query: 19  VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSC 77
           + +T  DV   +  ++    V   +N K+  +   +     +E +    P +L     + 
Sbjct: 20  IGSTLYDVFHELKLNMPYGPVNAKVNNKIEGMHYRLYHNKDVEFLDLHSPSALRAYTRTL 79

Query: 78  AHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFL 137
             ++ +AV  ++P   V I   + +G+Y D D ++P +  +   I ++MQEIIA   P  
Sbjct: 80  FFVLCKAVHDLYPHSNVVIDIPVSNGYYVDLDIQRPITPQDADAIRRRMQEIIAARLPIS 139

Query: 138 KQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
           +   + + A  +F+   +  KV +LE++      T Y    + D   G  + +T ++  F
Sbjct: 140 RHETTTDAAIAMFKKVGDESKVRLLETV-GTLYTTYYELDRYVDYYYGSLLTNTRELHLF 198


>gi|171778813|ref|ZP_02919875.1| hypothetical protein STRINF_00734 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171282459|gb|EDT47883.1| hypothetical protein STRINF_00734 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 618

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 64/120 (53%), Gaps = 11/120 (9%)

Query: 280 ISYMRRKIKDDYEEINT-----PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           I   ++ +++++E+I       P +L+  LW++SG +++Y  +++ +K      +D   F
Sbjct: 50  IEKFKKIMREEFEKIGAVEMLAPALLNADLWRESGRYETYGEDLYKLKN-----RDKSDF 104

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
            L P +     ++    +KSY++LP+ L +  S YR+E     +GL+R R F   D + F
Sbjct: 105 ILGPTHEETFTSLVRDAVKSYKQLPLNLYQIQSKYRDEKR-PRNGLLRTREFIMKDGYSF 163


>gi|257087410|ref|ZP_05581771.1| prolyl-tRNA synthetase [Enterococcus faecalis D6]
 gi|256995440|gb|EEU82742.1| prolyl-tRNA synthetase [Enterococcus faecalis D6]
 gi|315025439|gb|EFT37371.1| prolyl-tRNA synthetase [Enterococcus faecalis TX2137]
          Length = 572

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/167 (24%), Positives = 79/167 (47%), Gaps = 8/167 (4%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYR 315
           +I +  +G+  +     ++ + L + MR +  K D  E+  P +L   LW++SG +++Y 
Sbjct: 31  YIRQVAAGIYSYLPLANRVLEKLKTIMREEFEKIDAVEMLMPALLPAELWKESGRYETYG 90

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            N++ +K  +D     R + L P +      +    + SY+ LP+ L +  + YR+E   
Sbjct: 91  PNLYRLKDRND-----RDYILGPTHEETFTELIRDEINSYKRLPLNLYQIQTKYRDEKR- 144

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS-IYKDFGFE 421
              GL+R R F   D + F   E   ++  + +    S I++  G E
Sbjct: 145 PRSGLLRGREFIMKDGYSFHADEASLDQSYRDYEKAYSRIFERCGLE 191


>gi|323481345|gb|ADX80784.1| prolyl-tRNA synthetase [Enterococcus faecalis 62]
          Length = 572

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/167 (24%), Positives = 79/167 (47%), Gaps = 8/167 (4%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYR 315
           +I +  +G+  +     ++ + L + MR +  K D  E+  P +L   LW++SG +++Y 
Sbjct: 31  YIRQVAAGIYSYLPLANRVLEKLKAIMREEFEKIDAVEMLMPALLPAELWKESGRYETYG 90

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            N++ +K  +D     R + L P +      +    + SY+ LP+ L +  + YR+E   
Sbjct: 91  PNLYRLKDRND-----RDYILGPTHEETFTELIRDEINSYKRLPLNLYQIQTKYRDEKR- 144

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS-IYKDFGFE 421
              GL+R R F   D + F   E   ++  + +    S I++  G E
Sbjct: 145 PRSGLLRGREFIMKDGYSFHADEASLDQSYRDYEKAYSRIFERCGLE 191


>gi|160891492|ref|ZP_02072495.1| hypothetical protein BACUNI_03943 [Bacteroides uniformis ATCC 8492]
 gi|317478402|ref|ZP_07937565.1| uridine kinase [Bacteroides sp. 4_1_36]
 gi|156858899|gb|EDO52330.1| hypothetical protein BACUNI_03943 [Bacteroides uniformis ATCC 8492]
 gi|316905438|gb|EFV27229.1| uridine kinase [Bacteroides sp. 4_1_36]
          Length = 557

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/184 (22%), Positives = 85/184 (46%), Gaps = 2/184 (1%)

Query: 15  KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVI 73
           K FP+ ++  D+    + +   + V+  +N +   L+  V     +E +   D   +   
Sbjct: 16  KEFPIGSSLLDIYYGFNLNFPYQVVSAKVNNRSEGLNFRVYNNKDVEFLDIRDSSGMRTY 75

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
             S   I+ +AV  ++PE ++ +   +  G++ +    +P   +++A I+K+MQEIIA +
Sbjct: 76  VRSLCFILYKAVSELFPEGKLFVEHPVSKGYFCNLRIGRPIELEDVAAIKKRMQEIIAEN 135

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQ 193
            P+ +      +A  +F  +    KV++LE+         Y  G+  D   G  + STG 
Sbjct: 136 IPYHRVECHTTEAVRIFNERGMNDKVKLLET-SGSLYTYYYTLGDTVDYYYGNLLPSTGY 194

Query: 194 VKKF 197
           +  F
Sbjct: 195 IWLF 198


>gi|220934299|ref|YP_002513198.1| prolyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7]
 gi|254782924|sp|B8GPP4|SYP_THISH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|219995609|gb|ACL72211.1| prolyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7]
          Length = 574

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/161 (25%), Positives = 70/161 (43%), Gaps = 8/161 (4%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG+  W   G ++ + +   +R ++ +    E+  P V    LWQ+SG W+ Y   +  +
Sbjct: 37  SGLYSWTPLGLRVLRKVEGLVRDEMDRAGALELLMPAVQPAELWQESGRWEQYGPELLRL 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           K      + +R F   P +           +KSYR+LPV   +  + +R+E      G+M
Sbjct: 97  KD-----RHMREFCFGPTHEEVITDYVRREVKSYRQLPVNYYQIQTKFRDEIRPRF-GVM 150

Query: 382 RVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFE 421
           R R F   DA+ F   E    E   ++H     I+   G +
Sbjct: 151 RAREFLMKDAYSFHVDEDSLKETYARMHEAYTRIFTRCGLD 191


>gi|114152232|sp|Q3IGT7|SYP_PSEHT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
          Length = 574

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 69/145 (47%), Gaps = 11/145 (7%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ K +  E+  P +    LW++SG WD +   +  
Sbjct: 36  ASGLYTWLPTGLRVLRKVENIVREEMNKANAIEMLMPVIQPADLWEESGRWDEFGPELMR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
                 T +  RTFAL P +           + SY++LP+ L +  +  R+E      G+
Sbjct: 96  F-----TDRHNRTFALGPTHEEVITDFVRKEISSYKQLPISLYQIQTKVRDERRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECL 405
           MR R FT  DA+ F     + +ECL
Sbjct: 150 MRAREFTMKDAYSF----HLSDECL 170


>gi|239618079|ref|YP_002941401.1| prolyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
 gi|259511603|sp|C5CFP9|SYP_KOSOT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|239506910|gb|ACR80397.1| prolyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
          Length = 581

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 80/174 (45%), Gaps = 15/174 (8%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRA 316
           + ++ +GV  +   G ++ + +   +R ++     +EI  P +    LW +SG WD Y  
Sbjct: 32  VRKNAAGVYTYLPLGLRVLKKVEQIVREEMAAIGCQEILMPIIQPAELWFESGRWDDYGP 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M   K   +     R F L P +     ++  + L+SYR+ P+ L +  + YR+E    
Sbjct: 92  EMMKFKDRHE-----RDFTLGPTHEELLTSIVRNELRSYRQFPLSLFQIANKYRDEIRPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR 430
             GL+R R F   DA+ F T  +  ++  K        YK +G  +IM ++  +
Sbjct: 147 F-GLIRAREFLMKDAYSFHTDWESLDKAYK------DFYKAYG--RIMERIGLK 191


>gi|222148295|ref|YP_002549252.1| prolyl-tRNA synthetase [Agrobacterium vitis S4]
 gi|221735283|gb|ACM36246.1| prolyl-tRNA synthetase [Agrobacterium vitis S4]
          Length = 498

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 84/205 (40%), Gaps = 18/205 (8%)

Query: 236 YFL-------EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KI 287
           YFL       +E+E   HR + R      I +   G+  W   G ++   + + +R+ + 
Sbjct: 64  YFLPILKENPKEAEIVSHRLMLRT---GMIRQQSQGIYSWLPLGKRVLDKVNAIIRQEQN 120

Query: 288 KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
           +    E+  P +    LWQ+SG +D Y   M  +K   D     R     P N      +
Sbjct: 121 RAGAVELLMPTLQSAELWQESGRYDDYGKEMLRIKDRQD-----RPMLYGPTNEEMITDI 175

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLK 406
           F   +KSY+ LP+ L      +R+E      G MR R F   DA+ F  TKE   +   K
Sbjct: 176 FRSYVKSYKSLPLNLYHIQLKFRDEIRPRF-GTMRSREFLMKDAYSFDLTKESAIHSYNK 234

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRP 431
           +    +  +   G   I ++  T P
Sbjct: 235 MFAAYLRTFDRLGLRAIPMRADTGP 259


>gi|312277616|gb|ADQ62273.1| Prolyl-tRNA synthetase [Streptococcus thermophilus ND03]
          Length = 615

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 55/102 (53%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  +++ +K  D++      F L P +      +    +
Sbjct: 63  EMLAPALLTADLWRESGRYETYGEDLYKLKNRDNS-----DFILGPTHEETFTVLVRDAV 117

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +  S YR+E     +GL+R R F   DA+ F
Sbjct: 118 KSYKQLPLNLYQIQSKYRDEKR-PRNGLLRTREFIMKDAYSF 158


>gi|255030222|ref|ZP_05302173.1| prolyl-tRNA synthetase [Listeria monocytogenes LO28]
          Length = 505

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 83/192 (43%), Gaps = 27/192 (14%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI----KDDYEEIN 295
           ++E + H+ L R           +G I     G   +  L + M RKI    +++ E I 
Sbjct: 17  DAEVKSHQLLLR-----------AGFIRQTASGIYSYLPLATLMLRKIETIIREELEAIG 65

Query: 296 TPQVL-----DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH 350
             ++L        LWQ+SG W+ Y   +  +K      +  R FAL P +     A+   
Sbjct: 66  AAELLMPALQPAELWQESGRWNDYGPELMRLKD-----RASRDFALGPTHEEVITALLRD 120

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI-HN 409
            +KSY+ LP+ L +  + +R+E      GL+R R F   DA+ F    +  +E   + H 
Sbjct: 121 EVKSYKRLPLTLYQIQTKFRDEKRPRF-GLLRGREFIMKDAYSFHATSESLDEVYNLMHQ 179

Query: 410 LIISIYKDFGFE 421
              +I+   G E
Sbjct: 180 AYSNIFTRCGLE 191


>gi|162139703|ref|YP_819759.2| prolyl-tRNA synthetase [Streptococcus thermophilus LMD-9]
 gi|148887037|sp|Q03MK9|SYP_STRTD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
          Length = 620

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 55/102 (53%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  +++ +K  D++      F L P +      +    +
Sbjct: 68  EMLAPALLTADLWRESGRYETYGEDLYKLKNRDNS-----DFILGPTHEETFTVLVRDAV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +  S YR+E     +GL+R R F   DA+ F
Sbjct: 123 KSYKQLPLNLYQIQSKYRDEKR-PRNGLLRTREFIMKDAYSF 163


>gi|313497556|gb|ADR58922.1| ProS [Pseudomonas putida BIRD-1]
          Length = 571

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/194 (22%), Positives = 87/194 (44%), Gaps = 10/194 (5%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           +QYL   ++    D   ++ ++ L    I +  SG+  W   G ++ + + + +R ++  
Sbjct: 4   SQYLLATQKETPADAVVISHQLMLRAGMIRKLASGLYTWLPMGLRVMRKVEAVVREEMNA 63

Query: 290 DYE-EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
               E+  P +    LWQ+SG W+ Y   +  +K      +  R F + P +      + 
Sbjct: 64  AGALEVLMPSIQPAELWQESGRWEQYGPELLRLKD-----RHQRDFCVGPTHEEVITDLA 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KI 407
            + L SY++LP+ L +  + +R+E      GLMR R F   DA+ F   +    E   ++
Sbjct: 119 RNELSSYKQLPLNLYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSFHADQASLQETYDRM 177

Query: 408 HNLIISIYKDFGFE 421
           H    +++   G +
Sbjct: 178 HQAYTNVFTRLGLD 191


>gi|315645695|ref|ZP_07898819.1| prolyl-tRNA synthetase [Paenibacillus vortex V453]
 gi|315279173|gb|EFU42483.1| prolyl-tRNA synthetase [Paenibacillus vortex V453]
          Length = 576

 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 67/139 (48%), Gaps = 7/139 (5%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYR 315
           +I +  +G+  +   GW++ + +   +R+++     +E+  P V    LW++SG +D Y 
Sbjct: 31  YIRQTAAGIYSYLPLGWRVLRKIEGIIRQEMDAAGAQEMLMPAVQPAELWKESGRYDVYG 90

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
             +  +    D     R F L P +     ++    + SYR+LPV L +  S YR+E   
Sbjct: 91  PELIRLHDRHD-----REFVLGPTHEEVITSIVRQEISSYRKLPVNLYQIQSKYRDERRP 145

Query: 376 SLHGLMRVRGFTQDDAHVF 394
              GL+R R F   DA+ F
Sbjct: 146 RF-GLLRGREFLMKDAYSF 163


>gi|186680962|ref|YP_001864158.1| prolyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
 gi|226701314|sp|B2J707|SYP_NOSP7 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|186463414|gb|ACC79215.1| prolyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
          Length = 604

 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 70/152 (46%), Gaps = 6/152 (3%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSY- 314
           +I   GSG+  +    W++ Q +   +R ++     +E   PQ+    LW++SG WD+Y 
Sbjct: 31  YIRRIGSGLYAYLPLMWRVLQKVSQIVREEMNATGAQECLLPQLQPADLWKESGRWDTYT 90

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
           +A        D   +  +   L P +     A+    ++SYR+LP+ L +  + +R+E  
Sbjct: 91  KAEGIMFSLID---RREQQLGLGPTHEEVITAIARDMIRSYRQLPLHLYQIQTKFRDEIR 147

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
               GLMR R F   D + F T E    E  +
Sbjct: 148 PRF-GLMRGREFIMKDGYSFHTDEASLKETYQ 178


>gi|188588485|ref|YP_001922238.1| phosphoribulokinase [Clostridium botulinum E3 str. Alaska E43]
 gi|188498766|gb|ACD51902.1| putative threonyl-tRNA synthetase/uridine kinase [Clostridium
           botulinum E3 str. Alaska E43]
          Length = 548

 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/164 (27%), Positives = 74/164 (45%), Gaps = 2/164 (1%)

Query: 35  AKKAVAVAINGKVCDLSDPVRE-GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQ 93
            K      +NGK  +L D + E G IE I       L +   +   I  +A   ++P  +
Sbjct: 30  VKNIALCKLNGKYHELRDIISESGEIETINFNTEMGLNIYTRTLQFIFIKATLDLFPNSK 89

Query: 94  VAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESK 153
           + I   I  G + +  KE P +  ++  I++KM+EII ++       +S ++A  +F+  
Sbjct: 90  IKIEHSISKGLFGEVIKEDPLNEKDIKLIKEKMKEIIIKNVLINSIRISKDEAINIFDQY 149

Query: 154 KEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
               KV +LE+    E V LY     +D   G    STG +K F
Sbjct: 150 GMEDKVLLLENSNLNE-VKLYELEGRYDYFYGQMAYSTGIIKAF 192


>gi|116100417|gb|ABJ65563.1| Prolyl-tRNA synthetase [Streptococcus thermophilus LMD-9]
          Length = 615

 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 55/102 (53%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  +++ +K  D++      F L P +      +    +
Sbjct: 63  EMLAPALLTADLWRESGRYETYGEDLYKLKNRDNS-----DFILGPTHEETFTVLVRDAV 117

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +  S YR+E     +GL+R R F   DA+ F
Sbjct: 118 KSYKQLPLNLYQIQSKYRDEKR-PRNGLLRTREFIMKDAYSF 158


>gi|325292651|ref|YP_004278515.1| Prolyl-tRNA synthetase [Agrobacterium sp. H13-3]
 gi|325060504|gb|ADY64195.1| Prolyl-tRNA synthetase [Agrobacterium sp. H13-3]
          Length = 477

 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 50/195 (25%), Positives = 81/195 (41%), Gaps = 11/195 (5%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTP 297
           +E+E   HR + R      I +  +G+  W   G ++   +   +R  + +    E+  P
Sbjct: 53  KEAEIVSHRLMLRAG---MIRQQSAGIYSWLPLGKRVLDKVNRIIREEQDRSGAIELLMP 109

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LWQ+SG +D Y   M  +K   D     R     P N      +F   +KSY+ 
Sbjct: 110 TLQTAELWQESGRYDDYGKEMLRIKDRQD-----RQMLYGPTNEEMITDIFRSYVKSYKN 164

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYK 416
           LP+ L      +R+E      G MR R F   DA+ F  TKE   +   K+    +  ++
Sbjct: 165 LPLNLYHIQLKFRDEVRPRF-GTMRSREFLMKDAYSFDLTKEDAIHSYNKMFVAYLRTFE 223

Query: 417 DFGFEKIMVKLSTRP 431
             G   I ++  T P
Sbjct: 224 RLGLRAIPMRADTGP 238


>gi|86281359|gb|ABC90422.1| prolyl-tRNA synthetase protein [Rhizobium etli CFN 42]
          Length = 410

 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/176 (25%), Positives = 76/176 (43%), Gaps = 8/176 (4%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +   G+  W   G ++   + + +R  + +    E++ P +    LWQ+SG +D+Y  
Sbjct: 2   IRQQSQGIYSWLPLGKRVLDKVNAIIREEQNRAGAIELSMPTLQSAELWQESGRYDAYGK 61

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  +K   D     R     P N      +F   +KSY++LP+ L      +R+E    
Sbjct: 62  EMLRIKDRQD-----RPMLYGPTNEEMVTDIFRSSVKSYKDLPLNLYHIQLKFRDEIRPR 116

Query: 377 LHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP 431
             G MR R F   DA+ F  T+E   +   K+    +  ++  G   I ++  T P
Sbjct: 117 F-GTMRSREFMMKDAYSFDLTREGAEHSYNKMFAAYLRTFERLGLRAIPMRADTGP 171


>gi|168485970|ref|ZP_02710478.1| prolyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00]
 gi|183570860|gb|EDT91388.1| prolyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00]
          Length = 617

 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 55/102 (53%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+ TP +L   LW++SG +++Y  +++ +K      ++   F L P +     A+    +
Sbjct: 68  EMLTPALLSAELWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFTAIVRDSV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +    YR+E     +GL+R R F   DA+ F
Sbjct: 123 KSYKQLPLNLYQIQPKYRDEKR-PRNGLLRTREFIMKDAYSF 163


>gi|15643280|ref|NP_228324.1| prolyl-tRNA synthetase [Thermotoga maritima MSB8]
 gi|81859132|sp|Q9WYY4|SYP_THEMA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|4981026|gb|AAD35599.1|AE001727_11 prolyl-tRNA synthetase [Thermotoga maritima MSB8]
          Length = 577

 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 64/141 (45%), Gaps = 18/141 (12%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           +EI  P +    LW+QSG WD Y   M  +K   +     R F L P +      +  + 
Sbjct: 67  QEILMPILQPAELWKQSGRWDDYGPEMMKLKDRHE-----RDFTLGPTHEEIVTDLVKNE 121

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI 411
           L+SY++LP+ L +  + YR+E      GL+R R F   DA+ F    +  +E        
Sbjct: 122 LRSYKQLPLTLYQIANKYRDEIRPRF-GLLRAREFIMKDAYSFHASWESLDET------- 173

Query: 412 ISIYKDF--GFEKIMVKLSTR 430
              Y+ F   + +IM +L  R
Sbjct: 174 ---YEQFKKAYSRIMERLGVR 191


>gi|77360564|ref|YP_340139.1| prolyl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
 gi|76875475|emb|CAI86696.1| prolyl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
          Length = 544

 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 69/145 (47%), Gaps = 11/145 (7%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ K +  E+  P +    LW++SG WD +   +  
Sbjct: 6   ASGLYTWLPTGLRVLRKVENIVREEMNKANAIEMLMPVIQPADLWEESGRWDEFGPELMR 65

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
                 T +  RTFAL P +           + SY++LP+ L +  +  R+E      G+
Sbjct: 66  F-----TDRHNRTFALGPTHEEVITDFVRKEISSYKQLPISLYQIQTKVRDERRPRF-GV 119

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECL 405
           MR R FT  DA+ F     + +ECL
Sbjct: 120 MRAREFTMKDAYSF----HLSDECL 140


>gi|220904224|ref|YP_002479536.1| prolyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|254782896|sp|B8IZD1|SYP_DESDA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|219868523|gb|ACL48858.1| prolyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 574

 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 77/169 (45%), Gaps = 8/169 (4%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG+  +   G ++   +   +R ++ K  + E+  P V    LW+++G W+ Y   +   
Sbjct: 37  SGLYIYLPLGLRVINKIARTVREEMEKAGFRELLMPMVQPGDLWKETGRWEHYGKELLRF 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           K  ++     R + L P +      +    ++SYR+LPVRL +  + +R+E      GLM
Sbjct: 97  KDRNE-----REYCLGPTHEEVITDLVRGEVRSYRQLPVRLYQVQTKFRDEIRPRF-GLM 150

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLKI-HNLIISIYKDFGFEKIMVKLST 429
           R R F   D + F    +   E  KI ++  +SI+   G     V+  T
Sbjct: 151 RGREFMMKDGYSFDATAEGAEESYKIMYDAYMSIFSRLGLRFRAVEADT 199


>gi|148241975|ref|YP_001227132.1| prolyl-tRNA synthetase [Synechococcus sp. RCC307]
 gi|166980166|sp|A5GSC0|SYP_SYNR3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|147850285|emb|CAK27779.1| Prolyl-tRNA synthetase [Synechococcus sp. RCC307]
          Length = 600

 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 16/193 (8%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINT--P 297
           E+E   H+ L R   +  +A   SG+  +    W++ + + + +R+++ D    + T  P
Sbjct: 17  EAEIPSHKLLLRGGYIRRVA---SGIYAYLPLMWRVLRKVSAIVRQEM-DAAGALETLLP 72

Query: 298 QVLDQHLWQQSGHWDSYRAN---MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
           Q+    LWQ+SG W  Y A    MF ++   D     R   L P +     A+    L+S
Sbjct: 73  QLQPAELWQRSGRWSGYTAGEGIMFHLQDRQD-----RELGLGPTHEEVITALAADLLRS 127

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIIS 413
           YR+LPV L +  + +R+E      GLMR R F   DA+ F  + E +      +      
Sbjct: 128 YRQLPVNLYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSFHASAEDLGRGYAAMDQAYRR 186

Query: 414 IYKDFGFEKIMVK 426
           I+   G + + V+
Sbjct: 187 IFSRCGLQVVAVQ 199


>gi|227890630|ref|ZP_04008435.1| prolyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
 gi|227867568|gb|EEJ74989.1| prolyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
 gi|300214372|gb|ADJ78788.1| Prolyl-tRNA synthetase (Proline--tRNA ligase) (ProRS)
           [Lactobacillus salivarius CECT 5713]
          Length = 571

 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/160 (25%), Positives = 79/160 (49%), Gaps = 11/160 (6%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYR 315
           +I +  +G+  +    +++ + + + +R ++ + D  E+  P V+   LWQ+SG +++Y 
Sbjct: 31  YIKQITAGMYAYLPLAYRVMKKIENIIREEMDRIDAVEMLVPAVVPAELWQESGRYETYG 90

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
             +F +K   +     R F L P +      +    +KSY++LP+ L +    YR+E   
Sbjct: 91  PTLFKLKDRHE-----RDFILGPTHEETFTTIVRDAIKSYKKLPLYLYQIQMKYRDENRP 145

Query: 376 SLHGLMRVRGFTQDDAHVF----CTKEQMFNECLKIHNLI 411
              GL+R R F   D + F     + E++FN+  K +  I
Sbjct: 146 RF-GLLRGREFLMLDGYSFHVDDASMEKVFNDTDKAYQRI 184


>gi|301300275|ref|ZP_07206484.1| proline--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
 gi|300852116|gb|EFK79791.1| proline--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
          Length = 570

 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/160 (25%), Positives = 79/160 (49%), Gaps = 11/160 (6%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYR 315
           +I +  +G+  +    +++ + + + +R ++ + D  E+  P V+   LWQ+SG +++Y 
Sbjct: 31  YIKQITAGMYAYLPLAYRVMKKIENIIREEMDRIDAVEMLVPAVVPAELWQESGRYETYG 90

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
             +F +K   +     R F L P +      +    +KSY++LP+ L +    YR+E   
Sbjct: 91  PTLFKLKDRHE-----RDFILGPTHEETFTTIVRDAIKSYKKLPLYLYQIQMKYRDENRP 145

Query: 376 SLHGLMRVRGFTQDDAHVF----CTKEQMFNECLKIHNLI 411
              GL+R R F   D + F     + E++FN+  K +  I
Sbjct: 146 RF-GLLRGREFLMLDGYSFHVDDASMEKVFNDTDKAYQRI 184


>gi|257453930|ref|ZP_05619207.1| prolyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
 gi|257448702|gb|EEV23668.1| prolyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
          Length = 586

 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/167 (26%), Positives = 78/167 (46%), Gaps = 12/167 (7%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  SG+  W   G K  Q +   +R ++   + +E+  P V    LWQ+SG W++Y  
Sbjct: 32  IRKSASGLYTWLPMGLKTLQKVKKIIREEMDAINCQELLMPVVQSAELWQESGRWEAYGP 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            +   K      +  R F L P +      +  + LKSY++LPV   +  + +R+E    
Sbjct: 92  ELLRFKD-----RHQRDFVLGPTHEEVITDIARNLLKSYKQLPVSYYQVQTKFRDEIRPR 146

Query: 377 LHGLMRVRGFTQDDAHVF----CTKEQMFNECLKI-HNLIISIYKDF 418
             G+MR R F   DA+ F     + ++ +++  +  HN+   +  DF
Sbjct: 147 F-GVMRSREFIMKDAYSFHIDQPSLQRTYDDMYRAYHNIFTRLGLDF 192


>gi|90961542|ref|YP_535458.1| prolyl-tRNA synthetase [Lactobacillus salivarius UCC118]
 gi|114152204|sp|Q1WUG0|SYP_LACS1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|90820736|gb|ABD99375.1| Prolyl-tRNA synthetase [Lactobacillus salivarius UCC118]
          Length = 571

 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/160 (25%), Positives = 79/160 (49%), Gaps = 11/160 (6%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYR 315
           +I +  +G+  +    +++ + + + +R ++ + D  E+  P V+   LWQ+SG +++Y 
Sbjct: 31  YIKQITAGMYAYLPLAYRVMKKIENIIREEMDRIDAVEMLVPAVVPAELWQESGRYETYG 90

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
             +F +K   +     R F L P +      +    +KSY++LP+ L +    YR+E   
Sbjct: 91  PTLFKLKDRHE-----RDFILGPTHEETFTTIVRDAIKSYKKLPLYLYQIQMKYRDENRP 145

Query: 376 SLHGLMRVRGFTQDDAHVF----CTKEQMFNECLKIHNLI 411
              GL+R R F   D + F     + E++FN+  K +  I
Sbjct: 146 RF-GLLRGREFLMLDGYSFHVDDASMEKVFNDTDKAYQRI 184


>gi|229552422|ref|ZP_04441147.1| proline--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
 gi|258539792|ref|YP_003174291.1| prolyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705]
 gi|229314159|gb|EEN80132.1| proline--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
 gi|257151468|emb|CAR90440.1| Prolyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705]
          Length = 576

 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 58/115 (50%), Gaps = 6/115 (5%)

Query: 288 KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
           K D  ++  P +L   LW++SG +++Y  N+F +K   D     R   L P +      +
Sbjct: 63  KIDAVKMKMPALLPAELWEESGRYETYGPNLFKLKNRQD-----RKMILGPTHEETFTDL 117

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN 402
             + LKSY+ +P+ L +    +R+E     +G++R R F   DA+ F + +Q  N
Sbjct: 118 VRNELKSYKRMPLVLYQIQDKFRDEDR-PRYGVLRGREFIMQDAYSFTSNDQDLN 171


>gi|56416716|ref|YP_153790.1| prolyl-tRNA synthetase [Anaplasma marginale str. St. Maries]
 gi|81821288|sp|Q5PAZ5|SYP_ANAMM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|56387948|gb|AAV86535.1| prolyl-tRNA synthetase [Anaplasma marginale str. St. Maries]
          Length = 425

 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 75/171 (43%), Gaps = 8/171 (4%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHLWQQSGHWDSYRA 316
           + ++ SG+  W   G K+ +T+   +R ++    + EI  P V    LW++S  +DSY  
Sbjct: 32  VRQNASGLYTWLPLGLKVLRTIERIVREEMDSSGFLEILMPSVQPADLWRESLRYDSYGP 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  ++      +  R     P +      V    LKSYR+LP+ L +    +R+E    
Sbjct: 92  EMLRMQD-----RSGREMVFGPTHEEAISDVVRSSLKSYRDLPINLYQIQWKFRDELR-P 145

Query: 377 LHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVK 426
            HG+MR R F   DA+ F    E +      + +    I++  G   I  K
Sbjct: 146 RHGIMRGREFLMKDAYSFDVDFEGVMRSYENVFSAYFRIFRRLGLVPIAAK 196


>gi|281411733|ref|YP_003345812.1| prolyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
 gi|281372836|gb|ADA66398.1| prolyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
          Length = 577

 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 64/141 (45%), Gaps = 18/141 (12%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           +EI  P +    LW+QSG WD Y   M  +K   +     R F L P +      +  + 
Sbjct: 67  QEILMPILQPAELWKQSGRWDDYGPEMMKLKDRHE-----RDFTLGPTHEEIVTDLVKNE 121

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI 411
           L+SY++LP+ L +  + YR+E      GL+R R F   DA+ F    +  +E        
Sbjct: 122 LRSYKQLPLTLYQIANKYRDEIRPRF-GLLRAREFIMKDAYSFHASWESLDET------- 173

Query: 412 ISIYKDF--GFEKIMVKLSTR 430
              Y+ F   + +IM +L  R
Sbjct: 174 ---YEQFKKAYSRIMERLGVR 191


>gi|319649526|ref|ZP_08003682.1| prolyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
 gi|317398688|gb|EFV79370.1| prolyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
          Length = 567

 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 80/165 (48%), Gaps = 10/165 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E R H+ L R      I ++ SG+  +     K+ Q + + +R ++ +    E+  P 
Sbjct: 17  DAETRSHQLLLRA---GFIRQNASGIYSYMPLAKKVLQKVEAIIREEMDNAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W +Y   +  +K   +     R FAL   +     ++    +KSY++L
Sbjct: 74  LQQAELWQESGRWYTYGPELMRMKDRHE-----REFALGATHEEVITSLVRDAVKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE 403
           P+ L +  + +R+E      GL+R R F   DA+ F + ++  +E
Sbjct: 129 PLALYQIQTKFRDEKRPRF-GLLRGREFIMKDAYSFHSNQESLDE 172


>gi|307246760|ref|ZP_07528828.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
 gi|307255744|ref|ZP_07537547.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9
           str. CVJ13261]
 gi|307260196|ref|ZP_07541905.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 11
           str. 56153]
 gi|306852335|gb|EFM84572.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
 gi|306861304|gb|EFM93295.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9
           str. CVJ13261]
 gi|306865741|gb|EFM97620.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 11
           str. 56153]
          Length = 571

 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 91/202 (45%), Gaps = 10/202 (4%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-K 288
           +QYL+   +    D + ++ ++ L    I    SG+  W   G K+ + + + +R ++ K
Sbjct: 4   SQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMASGLYNWLPTGIKVLKKVENIIREEMNK 63

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
               E+  P V    LWQ+SG W+ Y A +   +  D   +  R F L P +      + 
Sbjct: 64  GGAIEVLMPVVQPAELWQESGRWNDYGAELL--RFVD---RGSRDFVLGPTHEEVITDLV 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI- 407
              + SY++LP+ L +  + +R+E      G+MR R F   DA+ F   +    E   + 
Sbjct: 119 RREVSSYKQLPLNLYQIQTKFRDEVRPRF-GVMRSREFVMKDAYSFHVDKASLQETYDVM 177

Query: 408 HNLIISIYKDFGFEKIMVKLST 429
           + +  +I+   G +   V+  T
Sbjct: 178 YQVYSNIFTRLGLDFRAVQADT 199


>gi|268590504|ref|ZP_06124725.1| hypothetical protein PROVRETT_06701 [Providencia rettgeri DSM 1131]
 gi|291314090|gb|EFE54543.1| proline--tRNA ligase [Providencia rettgeri DSM 1131]
          Length = 572

 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 81/170 (47%), Gaps = 8/170 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++++    E++ P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYDWLPTGVRVLRKVETIVREEMENAGAIEVSLPVVQPADLWQESGRWEQYGPEL-- 93

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           ++  D   +  R F L P +      +  + + SY++LP+ L +  + +R+E      G+
Sbjct: 94  LRFVD---RGERPFVLGPTHEEVITDLVRNEITSYKQLPLNLFQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFEKIMVKLST 429
           MR R F   DA+ F T ++   E    ++     I+   GF+   V+  T
Sbjct: 150 MRSREFIMKDAYSFHTSQESLQETYDAMYEAYSKIFTRIGFDFRAVQADT 199


>gi|307257929|ref|ZP_07539683.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 10
           str. D13039]
 gi|306863576|gb|EFM95505.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 10
           str. D13039]
          Length = 571

 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 91/202 (45%), Gaps = 10/202 (4%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-K 288
           +QYL+   +    D + ++ ++ L    I    SG+  W   G K+ + + + +R ++ K
Sbjct: 4   SQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMASGLYNWLPTGIKVLKKVENIIREEMNK 63

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
               E+  P V    LWQ+SG W+ Y A +   +  D   +  R F L P +      + 
Sbjct: 64  GGAIEVLMPVVQPAELWQESGRWNDYGAELL--RFVD---RGSRDFVLGPTHEEVITDLV 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI- 407
              + SY++LP+ L +  + +R+E      G+MR R F   DA+ F   +    E   + 
Sbjct: 119 RREVSSYKQLPLNLYQIQTKFRDEVRPRF-GVMRSREFVMKDAYSFHVDKASLQETYDVM 177

Query: 408 HNLIISIYKDFGFEKIMVKLST 429
           + +  +I+   G +   V+  T
Sbjct: 178 YQVYSNIFTRLGLDFRAVQADT 199


>gi|307251435|ref|ZP_07533349.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 4
           str. M62]
 gi|306856519|gb|EFM88661.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 4
           str. M62]
          Length = 571

 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 91/202 (45%), Gaps = 10/202 (4%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-K 288
           +QYL+   +    D + ++ ++ L    I    SG+  W   G K+ + + + +R ++ K
Sbjct: 4   SQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMASGLYNWLPTGIKVLKKVENIIREEMNK 63

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
               E+  P V    LWQ+SG W+ Y A +   +  D   +  R F L P +      + 
Sbjct: 64  GGAIEVLMPVVQPAELWQESGRWNDYGAELL--RFVD---RGSRDFVLGPTHEEVITDLV 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI- 407
              + SY++LP+ L +  + +R+E      G+MR R F   DA+ F   +    E   + 
Sbjct: 119 RREVSSYKQLPLNLYQIQTKFRDEVRPRF-GVMRSREFVMKDAYSFHVDKASLQETYDVM 177

Query: 408 HNLIISIYKDFGFEKIMVKLST 429
           + +  +I+   G +   V+  T
Sbjct: 178 YQVYSNIFTRLGLDFRAVQADT 199


>gi|32035109|ref|ZP_00135161.1| COG0442: Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|126209292|ref|YP_001054517.1| prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae L20]
 gi|166980093|sp|A3N3C6|SYP_ACTP2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|126098084|gb|ABN74912.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 5b
           str. L20]
          Length = 571

 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 91/202 (45%), Gaps = 10/202 (4%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-K 288
           +QYL+   +    D + ++ ++ L    I    SG+  W   G K+ + + + +R ++ K
Sbjct: 4   SQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMASGLYNWLPTGIKVLKKVENIIREEMNK 63

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
               E+  P V    LWQ+SG W+ Y A +   +  D   +  R F L P +      + 
Sbjct: 64  GGAIEVLMPVVQPAELWQESGRWNDYGAELL--RFVD---RGSRDFVLGPTHEEVITDLV 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI- 407
              + SY++LP+ L +  + +R+E      G+MR R F   DA+ F   +    E   + 
Sbjct: 119 RREVSSYKQLPLNLYQIQTKFRDEVRPRF-GVMRSREFVMKDAYSFHVDKASLQETYDVM 177

Query: 408 HNLIISIYKDFGFEKIMVKLST 429
           + +  +I+   G +   V+  T
Sbjct: 178 YQVYSNIFTRLGLDFRAVQADT 199


>gi|303252707|ref|ZP_07338869.1| prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|307248901|ref|ZP_07530912.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. S1536]
 gi|302648446|gb|EFL78640.1| prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|306854596|gb|EFM86788.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. S1536]
          Length = 571

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 91/202 (45%), Gaps = 10/202 (4%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-K 288
           +QYL+   +    D + ++ ++ L    I    SG+  W   G K+ + + + +R ++ K
Sbjct: 4   SQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMASGLYNWLPTGIKVLKKVENIIREEMNK 63

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
               E+  P V    LWQ+SG W+ Y A +   +  D   +  R F L P +      + 
Sbjct: 64  GGAIEVLMPVVQPAELWQESGRWNDYGAELL--RFVD---RGSRDFVLGPTHEEVITDLV 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI- 407
              + SY++LP+ L +  + +R+E      G+MR R F   DA+ F   +    E   + 
Sbjct: 119 RREVSSYKQLPLNLYQIQTKFRDEVRPRF-GVMRSREFVMKDAYSFHVDKASLQETYDVM 177

Query: 408 HNLIISIYKDFGFEKIMVKLST 429
           + +  +I+   G +   V+  T
Sbjct: 178 YQVYSNIFTRLGLDFRAVQADT 199


>gi|46579502|ref|YP_010310.1| alanyl-tRNA synthetase [Desulfovibrio vulgaris str. Hildenborough]
 gi|48428505|sp|P61700|SYA_DESVH RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|46448916|gb|AAS95569.1| alanyl-tRNA synthetase [Desulfovibrio vulgaris str. Hildenborough]
 gi|311233316|gb|ADP86170.1| alanyl-tRNA synthetase [Desulfovibrio vulgaris RCH1]
          Length = 879

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 70/151 (46%), Gaps = 12/151 (7%)

Query: 51  SDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFD 109
            D + +  +++   ED R  +   H+C H++  A++ +  + V+ A   +  D   +DF 
Sbjct: 546 GDILLDQEVDLTVTEDDRVASARNHTCTHLLHAALRRVLGDHVKQAGSLVAPDRLRFDFT 605

Query: 110 KEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKA--RELFESKKEAYKVEILESIPA 167
              P + +ELA +E+++  +I  D P    ++ ++ A  R       E Y  E+     A
Sbjct: 606 HIAPMTPEELAAVEREVNRVIMADIPLETDHMHYDDAVKRGAMALFGEKYGDEVRVVAIA 665

Query: 168 KENVTLYRQGEWFDLCRGPHVRSTGQVKKFF 198
            E+V         +LC G H+R+TGQ   F 
Sbjct: 666 DESV---------ELCGGTHLRATGQAGLFL 687


>gi|303251144|ref|ZP_07337328.1| prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|307253514|ref|ZP_07535384.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|302649995|gb|EFL80167.1| prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|306859015|gb|EFM91058.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
          Length = 571

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 91/202 (45%), Gaps = 10/202 (4%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-K 288
           +QYL+   +    D + ++ ++ L    I    SG+  W   G K+ + + + +R ++ K
Sbjct: 4   SQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMASGLYNWLPTGIKVLKKVENIIREEMNK 63

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
               E+  P V    LWQ+SG W+ Y A +   +  D   +  R F L P +      + 
Sbjct: 64  GGAIEVLMPVVQPAELWQESGRWNDYGAELL--RFVD---RGSRDFVLGPTHEEVITDLV 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI- 407
              + SY++LP+ L +  + +R+E      G+MR R F   DA+ F   +    E   + 
Sbjct: 119 RREVSSYKQLPLNLYQIQTKFRDEVRPRF-GVMRSREFVMKDAYSFHVDKASLQETYDVM 177

Query: 408 HNLIISIYKDFGFEKIMVKLST 429
           + +  +I+   G +   V+  T
Sbjct: 178 YQVYSNIFTRLGLDFRAVQADT 199


>gi|161507687|ref|YP_001577641.1| prolyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
 gi|172048310|sp|A8YVR3|SYP_LACH4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|160348676|gb|ABX27350.1| Prolyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
          Length = 565

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 59/122 (48%), Gaps = 11/122 (9%)

Query: 287 IKDDYEEINTPQVLDQHL-----WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           I+D+ E+IN P+++  HL     WQ+SG +  Y A MF +K      +  R   L P + 
Sbjct: 57  IEDEMEKINVPEMIMPHLLPATLWQESGRYKKYGAEMFKLKD-----RHGRESLLGPTHE 111

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
                +    LKSY+++P+ L +  + +R+E      GL+R R F   D + F       
Sbjct: 112 ETFTEIIAKNLKSYKQMPLALYQIQTKFRDENRPRF-GLLRGREFVMLDGYSFAATRDQL 170

Query: 402 NE 403
           +E
Sbjct: 171 DE 172


>gi|190151185|ref|YP_001969710.1| prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 7
           str. AP76]
 gi|307264534|ref|ZP_07546118.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 13
           str. N273]
 gi|226731421|sp|B3GZ82|SYP_ACTP7 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|189916316|gb|ACE62568.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 7
           str. AP76]
 gi|306870133|gb|EFN01893.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 13
           str. N273]
          Length = 571

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 91/202 (45%), Gaps = 10/202 (4%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-K 288
           +QYL+   +    D + ++ ++ L    I    SG+  W   G K+ + + + +R ++ K
Sbjct: 4   SQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMASGLYNWLPTGIKVLKKVENIIREEMNK 63

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
               E+  P V    LWQ+SG W+ Y A +   +  D   +  R F L P +      + 
Sbjct: 64  GGAIEVLMPVVQPAELWQESGRWNDYGAELL--RFVD---RGSRDFVLGPTHEEVITDLV 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI- 407
              + SY++LP+ L +  + +R+E      G+MR R F   DA+ F   +    E   + 
Sbjct: 119 RREVSSYKQLPLNLYQIQTKFRDEVRPRF-GVMRSREFVMKDAYSFHVDKASLQETYDVM 177

Query: 408 HNLIISIYKDFGFEKIMVKLST 429
           + +  +I+   G +   V+  T
Sbjct: 178 YQVYSNIFTRLGLDFRAVQADT 199


>gi|309811510|ref|ZP_07705292.1| proline--tRNA ligase [Dermacoccus sp. Ellin185]
 gi|308434561|gb|EFP58411.1| proline--tRNA ligase [Dermacoccus sp. Ellin185]
          Length = 587

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 88/192 (45%), Gaps = 19/192 (9%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R     +I     GV  W   G K+ + + + +R +++    +E++ P 
Sbjct: 19  DAELPGHKLLVRAG---YIRRAAPGVYTWLPLGLKVLRNVETIVREEMEAIGAQELSFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L +  ++ +  WD Y  N+F  +  D    D+       +  P H  +F   +K    S
Sbjct: 76  LLPREPYEATNRWDEYGPNLF--RLQDRKGVDM-------LLGPTHEEMFTITVKDMFSS 126

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH-NLIIS 413
           Y++LP  L +  + YR+E +    GL+R R F   D++ F   +Q   E    H    + 
Sbjct: 127 YKDLPTTLFQIQTKYRDE-ARPRAGLLRGREFIMKDSYSFDHTKQGLEESYAKHRGAYVK 185

Query: 414 IYKDFGFEKIMV 425
           I+   GFE ++V
Sbjct: 186 IFDRLGFEYVVV 197


>gi|295696152|ref|YP_003589390.1| prolyl-tRNA synthetase [Bacillus tusciae DSM 2912]
 gi|295411754|gb|ADG06246.1| prolyl-tRNA synthetase [Bacillus tusciae DSM 2912]
          Length = 567

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/184 (23%), Positives = 84/184 (45%), Gaps = 11/184 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+E   HR + R   +  +    SGV  +   G+++ + + + +R ++ +   +E+  P 
Sbjct: 17  EAEVPSHRLMLRAGMIRQVV---SGVYSYLPLGYRVLRKIEAIVREEMDRAGAQEVLLPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    LWQ+SG WD Y   +   +      +  R   L P +      +    ++SYR+L
Sbjct: 74  VQPASLWQESGRWDDYGKELLRFED-----RHQRMLVLGPTHEEVITDLVRTEVRSYRQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKD 417
           P+ L +  + +R+E      G+MR R F   DA+ F   E+  +   + ++     I++ 
Sbjct: 129 PMTLYQIQTKFRDEVRPRF-GVMRAREFIMKDAYSFDVDEEGLDRSYRAMYQAYEQIFRR 187

Query: 418 FGFE 421
            G E
Sbjct: 188 CGLE 191


>gi|253988145|ref|YP_003039501.1| prolyl-tRNA synthetase [Photorhabdus asymbiotica subsp. asymbiotica
           ATCC 43949]
 gi|253779595|emb|CAQ82756.1| prolyl-tRNA synthetase [Photorhabdus asymbiotica]
          Length = 574

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 69/144 (47%), Gaps = 7/144 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + +   +R ++ +    EI+ P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYNWMPTGIRVLKKVEKIVREEMNNAGAIEISMPVVQPADLWQESGRWEQYGPELL- 94

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            + AD   +  R F L P +      +  + + SY++LP+ L +  + +R+E      G+
Sbjct: 95  -RFAD---RGDRPFVLGPTHEEVVTDLIRNEVSSYKQLPLTLFQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNEC 404
           MR R F   DA+ F T ++   E 
Sbjct: 150 MRSREFLMKDAYSFHTTQESLQET 173


>gi|307331523|ref|ZP_07610636.1| prolyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113]
 gi|306882840|gb|EFN13913.1| prolyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113]
          Length = 573

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 88/194 (45%), Gaps = 22/194 (11%)

Query: 224 AWNTQQELTQYLYFLEE----SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTL 279
           A N Q+  T  L  L E    +E   H+ L R     ++    +G+  W   G K+ + +
Sbjct: 4   AVNVQRLSTTMLKTLREDPADAETASHKLLVRA---GYVRRAAAGIWTWLPIGKKVLENV 60

Query: 280 ISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKP 338
              +R ++     +E+  P +L +  ++ SG WD Y   +F +K  D    D        
Sbjct: 61  ARIVREEMDAIGAQEVLLPALLPREPYEVSGRWDEYGDLLFRIK--DRKGADY------- 111

Query: 339 MNCPGHVAVFNHGLK----SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           +  P H  +F   +K    SY++LPV L +  + YR+E +    G++R R F   D++ F
Sbjct: 112 LLGPTHEEIFTLTVKDQCTSYKDLPVMLYQIQTKYRDE-ARPRSGVLRGREFLMKDSYSF 170

Query: 395 CTKEQMFNECLKIH 408
            T ++   E  ++H
Sbjct: 171 DTTDEGLAESYRLH 184


>gi|308176793|ref|YP_003916199.1| proline--tRNA ligase [Arthrobacter arilaitensis Re117]
 gi|307744256|emb|CBT75228.1| proline--tRNA ligase [Arthrobacter arilaitensis Re117]
          Length = 595

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/200 (24%), Positives = 88/200 (44%), Gaps = 15/200 (7%)

Query: 232 TQYLYFLEE----SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI 287
           T +L  L E    +E   H+ L R     +I     G+  W   G K+   + + +R ++
Sbjct: 7   TTFLRTLREDPVDAEVASHKLLVRAG---YIRRAAPGIYTWLPLGLKVLARVEAIVREEM 63

Query: 288 KD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA 346
                +E++ P +L +  ++Q+G W  Y   +F +K   D       + L P +      
Sbjct: 64  NAIGAQEVHFPALLPREPYEQTGRWAEYGDGLFRLKDRKDA-----DYLLAPTHEEMFTL 118

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           +      SY++LPV L +  + YR+E +    GL+R R F   D++ F   ++  +E   
Sbjct: 119 LVKDLYNSYKDLPVYLYQIQNKYRDE-ARPRAGLLRGREFIMKDSYSFNIDDEGLDEAYM 177

Query: 407 IH-NLIISIYKDFGFEKIMV 425
            H    + I++  G E + V
Sbjct: 178 AHRGAYLKIFERLGLEVVPV 197


>gi|307262323|ref|ZP_07543971.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 12
           str. 1096]
 gi|306867986|gb|EFM99814.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 12
           str. 1096]
          Length = 571

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 91/202 (45%), Gaps = 10/202 (4%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-K 288
           +QYL+   +    D + ++ ++ L    I    SG+  W   G K+ + + + +R ++ K
Sbjct: 4   SQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMASGLYNWLPTGIKVLKKVENIIREEMNK 63

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
               E+  P V    LWQ+SG W+ Y A +   +  D   +  R F L P +      + 
Sbjct: 64  GGAIEVLMPVVQPAELWQESGRWNDYGAELL--RFVD---RGSRDFVLGPTHEEVITDLV 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI- 407
              + SY++LP+ L +  + +R+E      G+MR R F   DA+ F   +    E   + 
Sbjct: 119 RREVSSYKQLPLNLYQIQTKFRDEVRPRF-GVMRSREFVMKDAYSFHVDKASLQETYDVM 177

Query: 408 HNLIISIYKDFGFEKIMVKLST 429
           + +  +I+   G +   V+  T
Sbjct: 178 YQVYSNIFTRLGLDFRAVQADT 199


>gi|120602949|ref|YP_967349.1| alanyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
 gi|205830078|sp|A1VEQ6|SYA_DESVV RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|120563178|gb|ABM28922.1| alanyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
          Length = 879

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 70/151 (46%), Gaps = 12/151 (7%)

Query: 51  SDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFD 109
            D + +  +++   ED R  +   H+C H++  A++ +  + V+ A   +  D   +DF 
Sbjct: 546 GDILLDQEVDLTVTEDDRVASARNHTCTHLLHAALRRVLGDHVKQAGSLVAPDRLRFDFT 605

Query: 110 KEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKA--RELFESKKEAYKVEILESIPA 167
              P + +ELA +E+++  +I  D P    ++ ++ A  R       E Y  E+     A
Sbjct: 606 HIAPMTPEELAAVEREVNRVIMADIPLETDHMHYDDAVKRGAMALFGEKYGDEVRVVAIA 665

Query: 168 KENVTLYRQGEWFDLCRGPHVRSTGQVKKFF 198
            E+V         +LC G H+R+TGQ   F 
Sbjct: 666 DESV---------ELCGGTHLRATGQAGLFL 687


>gi|73542636|ref|YP_297156.1| prolyl-tRNA synthetase [Ralstonia eutropha JMP134]
 gi|114152236|sp|Q46X21|SYP_RALEJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|72120049|gb|AAZ62312.1| Prolyl-tRNA synthetase, bacterial [Ralstonia eutropha JMP134]
          Length = 573

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/162 (22%), Positives = 80/162 (49%), Gaps = 8/162 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           G+G+  +   G ++ + + + +R ++ +    E++ P +    LWQ++G WD     +  
Sbjct: 36  GAGIYNYMPVGLRVIRKVENIVREEMNRAGAVELSMPVIQPAELWQETGRWDKMGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +K      +  R FA++P +      +    ++SY++LPV   +  + +R+E      G+
Sbjct: 96  LKD-----RHERDFAVQPTSEEVVTDIARSEIRSYKQLPVNFYQIQTKFRDERRPRF-GI 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDFGFE 421
           MR R FT  DA+ F    +   +  + +++  + I++ FG E
Sbjct: 150 MRGREFTMKDAYSFDRDAEGLKKSYENMYDAYVRIFQRFGLE 191


>gi|260101368|ref|ZP_05751605.1| proline-tRNA ligase [Lactobacillus helveticus DSM 20075]
 gi|260084820|gb|EEW68940.1| proline-tRNA ligase [Lactobacillus helveticus DSM 20075]
 gi|328465729|gb|EGF36933.1| prolyl-tRNA synthetase [Lactobacillus helveticus MTCC 5463]
          Length = 565

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 59/122 (48%), Gaps = 11/122 (9%)

Query: 287 IKDDYEEINTPQVLDQHL-----WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           I+D+ E+IN P+++  HL     WQ+SG +  Y A MF +K      +  R   L P + 
Sbjct: 57  IEDEMEKINVPEMIMPHLLPATLWQESGRYKKYGAEMFKLKD-----RHGRESLLGPTHE 111

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
                +    LKSY+++P+ L +  + +R+E      GL+R R F   D + F       
Sbjct: 112 ETFTEIIAKNLKSYKQMPLALYQIQTKFRDENRPRF-GLLRGREFVMLDGYSFAATRDQL 170

Query: 402 NE 403
           +E
Sbjct: 171 DE 172


>gi|182678768|ref|YP_001832914.1| prolyl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC
           9039]
 gi|226699120|sp|B2IDI9|SYP_BEII9 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|182634651|gb|ACB95425.1| prolyl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC
           9039]
          Length = 439

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/202 (25%), Positives = 89/202 (44%), Gaps = 14/202 (6%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
           +E+E   HR + R      I ++ +G+  W   G+++ Q +   +R ++ +    E+  P
Sbjct: 16  KEAEIVSHRLMLRAG---MIRQEAAGIYAWLPLGFRVLQKVEQIVREEMDRAGAIELLMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW+++G +D+Y   M  +K   +     R     P N      +F   ++SYR+
Sbjct: 73  TLQLADLWRETGRYDAYGPEMLRIKDRHE-----RELLYGPTNEDMITEIFRAYVRSYRD 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYK 416
           LP  L      +R+E      G+MR R F   DA+ F   E+       K+    + IYK
Sbjct: 128 LPKILYHIQWKFRDEQRPRF-GVMRGREFLMKDAYSFDLDEEGARLSYNKMFVAYLRIYK 186

Query: 417 DFGFEKIMVKLSTRPEKRVGSD 438
             G   I ++  T P   +G D
Sbjct: 187 RMGLTAIPMRAETGP---IGGD 205


>gi|40063052|gb|AAR37908.1| prolyl-tRNA synthetase [uncultured marine bacterium 560]
          Length = 567

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 74/166 (44%), Gaps = 8/166 (4%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           +++  SG+  +   G ++ Q +   +R ++ K   +E+  P      LWQ+SG W+ Y  
Sbjct: 32  VSKLASGLYSYLPIGLRVIQKVEKIIREEMNKSLAQELLMPVAQPAELWQESGRWEEYGP 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            +   K   +     R F L P +      +    L+SY++LP+   +  + +R+E    
Sbjct: 92  ELLRFKDRHE-----RDFCLGPTHEEVITNIAKQYLRSYKQLPINFYQIQTKFRDEIRPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKI-HNLIISIYKDFGFE 421
             G+MR R F   DA+ F   E    E  ++ H    +I+   G E
Sbjct: 147 F-GVMRSREFIMKDAYSFHIDEASLGETYQVMHQTYCNIFDRLGLE 191


>gi|256828741|ref|YP_003157469.1| prolyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
 gi|256577917|gb|ACU89053.1| prolyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
          Length = 580

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/184 (24%), Positives = 84/184 (45%), Gaps = 11/184 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+E   H+ L R   +  +    SG+  +   G +    + + +R ++ +   +EI+ P 
Sbjct: 17  EAEVISHKLLLRAGMIRKLT---SGIYTYMPLGLRAINKVANIVREEMNRAGAQEISMPM 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    LWQ+SG WD Y   +  +K      +  R + L P +      +    ++SYR+L
Sbjct: 74  VQPADLWQESGRWDFYGKELLRLK-----DRHGRDYCLGPTHEEVITDLIRGEVRSYRQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKD 417
           P+ L +  + +R+E      GLMR R F   DA+ F   ++  N   + +++    ++  
Sbjct: 129 PINLYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSFDKDDEGVNASYQAMYDAYTRVFTR 187

Query: 418 FGFE 421
            G E
Sbjct: 188 LGLE 191


>gi|323466334|gb|ADX70021.1| Proline-tRNA ligase [Lactobacillus helveticus H10]
          Length = 565

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 59/122 (48%), Gaps = 11/122 (9%)

Query: 287 IKDDYEEINTPQVLDQHL-----WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           I+D+ E+IN P+++  HL     WQ+SG +  Y A MF +K      +  R   L P + 
Sbjct: 57  IEDEMEKINVPEMIMPHLLPATLWQESGRYKKYGAEMFKLKD-----RHGRESLLGPTHE 111

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
                +    LKSY+++P+ L +  + +R+E      GL+R R F   D + F       
Sbjct: 112 ETFTEIIAKNLKSYKQMPLALYQIQTKFRDENRPRF-GLLRGREFVMLDGYSFAATRDQL 170

Query: 402 NE 403
           +E
Sbjct: 171 DE 172


>gi|255004184|ref|ZP_05278985.1| prolyl-tRNA synthetase [Anaplasma marginale str. Virginia]
          Length = 425

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 75/171 (43%), Gaps = 8/171 (4%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHLWQQSGHWDSYRA 316
           + ++ SG+  W   G K+ +T+   +R ++    + EI  P V    LW++S  +DSY  
Sbjct: 32  VRQNASGLYTWLPLGLKVLRTIEHIVREEMDSSGFLEILMPSVQPADLWRESLRYDSYGP 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  ++      +  R     P +      V    LKSYR+LP+ L +    +R+E    
Sbjct: 92  EMLRMQD-----RSGREMVFGPTHEEAISDVVRSSLKSYRDLPINLYQIQWKFRDELR-P 145

Query: 377 LHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVK 426
            HG+MR R F   DA+ F    E +      + +    I++  G   I  K
Sbjct: 146 RHGIMRGREFLMKDAYSFDVDFEGVMRSYENVFSAYFRIFRRLGLVPIAAK 196


>gi|297626631|ref|YP_003688394.1| Prolyl-tRNA synthetase (Proline--tRNA ligase) (ProRS)
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
 gi|296922396|emb|CBL56968.1| Prolyl-tRNA synthetase (Proline--tRNA ligase) (ProRS)
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
          Length = 588

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 89/192 (46%), Gaps = 19/192 (9%)

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQV 299
           +E   HR L R   +  +A    G+  W   G K+ Q + + +R ++     +E+  P +
Sbjct: 16  AEIPSHRFLVRAGYIRRVA---PGIYSWLPLGLKVLQRVENIVREEMDAMGGQEVLLPAL 72

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----SY 355
           L +  ++ S  W  Y  N+F  +  D    D+       +  P H  +F   +K    SY
Sbjct: 73  LPREPYEISNRWAEYGPNLF--RLVDRKGADM-------LLGPTHEEMFTLLVKDLYSSY 123

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC-LKIHNLIISI 414
           ++LPV L +  + YR+E +    G++R R F   D++ F   ++  +   LK  +  I I
Sbjct: 124 KDLPVILYQIQTKYRDE-ARPRAGILRGREFVMKDSYSFDVDDEGLDASYLKHRDAYIRI 182

Query: 415 YKDFGFEKIMVK 426
           +   GFE ++VK
Sbjct: 183 FDRLGFEYVIVK 194


>gi|269958866|ref|YP_003328655.1| prolyl-tRNA synthetase [Anaplasma centrale str. Israel]
 gi|269848697|gb|ACZ49341.1| prolyl-tRNA synthetase [Anaplasma centrale str. Israel]
          Length = 425

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/171 (25%), Positives = 74/171 (43%), Gaps = 8/171 (4%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHLWQQSGHWDSYRA 316
           + ++ SG+  W   G K+ + +   +R ++    + EI  P V    LW++S  +DSY  
Sbjct: 32  VRQNASGLYTWLPLGLKVLRGIERIVREEMDSSGFLEILMPSVQPAELWRESQRYDSYGL 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  ++      +  R     P +      V    LKSYR+LP+ L +    +R+E    
Sbjct: 92  EMLRMQ-----DRSGREMVFGPTHEESISDVVRSSLKSYRDLPISLYQMQWKFRDELR-P 145

Query: 377 LHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVK 426
            HG+MR R F   DA+ F    E        + +  + I++  G   I  K
Sbjct: 146 RHGIMRCREFLMKDAYSFDVDFESAMRSYSNVFSAYLRIFRRLGLVAIAAK 196


>gi|281419389|ref|ZP_06250404.1| prolyl-tRNA synthetase [Clostridium thermocellum JW20]
 gi|281407009|gb|EFB37272.1| prolyl-tRNA synthetase [Clostridium thermocellum JW20]
          Length = 572

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 91/196 (46%), Gaps = 19/196 (9%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+E   H+ + R   +  +A   SG+  +   G+++F+ +   +R ++ +   +E+    
Sbjct: 17  EAEIASHQLMLRAGLMRKLA---SGIYSFLPLGYRVFRKIEQIVREEMDRAGAQELIMSA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L    +Q SG W+ + A MF +K      ++ R F L P     H  +F   +K    S
Sbjct: 74  LLPAESYQASGRWEVFGAEMFRLK-----DRNGRDFCLGPT----HEEIFTETVKSVTRS 124

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIIS 413
           YR LP+ L +  + YR+E      G+MR R F   DA+ F   E   +    K+++    
Sbjct: 125 YRSLPLILYQIQTKYRDERRPRF-GVMRSREFVMKDAYSFDRDEAGLDISYKKMYDAYCR 183

Query: 414 IYKDFGFEKIMVKLST 429
           I+   G + I+V   T
Sbjct: 184 IFDRLGLDYIIVDADT 199


>gi|159184694|ref|NP_354297.2| prolyl-tRNA synthetase [Agrobacterium tumefaciens str. C58]
 gi|81848693|sp|Q8UFV9|SYP_AGRT5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|159139984|gb|AAK87082.2| prolyl-tRNA synthetase [Agrobacterium tumefaciens str. C58]
          Length = 440

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 50/195 (25%), Positives = 81/195 (41%), Gaps = 11/195 (5%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTP 297
           +E+E   HR + R      I +  +G+  W   G ++   +   +R  + +    E+  P
Sbjct: 16  KEAEIVSHRLMLRAG---MIRQQSAGIYSWLPLGKRVLDKVNKIIREEQNRAGAIELLMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LWQ+SG +D Y   M  +K   D     R     P N      +F   +KSY+ 
Sbjct: 73  TLQTAELWQESGRYDDYGKEMLRIKDRQD-----RQMLYGPTNEEMITDIFRSYVKSYKN 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYK 416
           LP+ L      +R+E      G MR R F   DA+ F  TKE   +   K+    +  ++
Sbjct: 128 LPLNLYHIQLKFRDEVRPRF-GTMRSREFLMKDAYSFDLTKEDAIHSYNKMFVAYLRTFE 186

Query: 417 DFGFEKIMVKLSTRP 431
             G   I ++  T P
Sbjct: 187 RLGLRAIPMRADTGP 201


>gi|256005276|ref|ZP_05430242.1| prolyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|255990712|gb|EEU00828.1| prolyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|316939553|gb|ADU73587.1| prolyl-tRNA synthetase [Clostridium thermocellum DSM 1313]
          Length = 572

 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 91/196 (46%), Gaps = 19/196 (9%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+E   H+ + R   +  +A   SG+  +   G+++F+ +   +R ++ +   +E+    
Sbjct: 17  EAEIASHQLMLRAGLMRKLA---SGIYSFLPLGYRVFRKIEQIVREEMDRAGAQELIMSA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L    +Q SG W+ + A MF +K      ++ R F L P     H  +F   +K    S
Sbjct: 74  LLPAESYQASGRWEVFGAEMFRLK-----DRNGRDFCLGPT----HEEIFTETVKSVTRS 124

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN-ECLKIHNLIIS 413
           YR LP+ L +  + YR+E      G+MR R F   DA+ F   E   +    K+++    
Sbjct: 125 YRSLPLILYQIQTKYRDERRPRF-GVMRSREFVMKDAYSFDRDEAGLDISYKKMYDAYCR 183

Query: 414 IYKDFGFEKIMVKLST 429
           I+   G + I+V   T
Sbjct: 184 IFDRLGLDYIIVDADT 199


>gi|125975428|ref|YP_001039338.1| prolyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|152016597|sp|A3DJL6|SYP_CLOTH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|125715653|gb|ABN54145.1| prolyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
          Length = 572

 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 91/196 (46%), Gaps = 19/196 (9%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+E   H+ + R   +  +A   SG+  +   G+++F+ +   +R ++ +   +E+    
Sbjct: 17  EAEIASHQLMLRAGLMRKLA---SGIYSFLPLGYRVFRKIEQIVREEMDRAGAQELIMSA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L    +Q SG W+ + A MF +K      ++ R F L P     H  +F   +K    S
Sbjct: 74  LLPAESYQASGRWEVFGAEMFRLK-----DRNGRDFCLGPT----HEEIFTETVKSVTRS 124

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIIS 413
           YR LP+ L +  + YR+E      G+MR R F   DA+ F   E   +    K+++    
Sbjct: 125 YRSLPLILYQIQTKYRDERRPRF-GVMRSREFVMKDAYSFDRDEAGLDISYKKMYDAYCR 183

Query: 414 IYKDFGFEKIMVKLST 429
           I+   G + I+V   T
Sbjct: 184 IFDRLGLDYIIVDADT 199


>gi|167627536|ref|YP_001678036.1| prolyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|189083499|sp|B0TXX4|SYP_FRAP2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|167597537|gb|ABZ87535.1| prolyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
          Length = 565

 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 72/161 (44%), Gaps = 8/161 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G K+ Q + + +R ++ K    E+  P VL   L Q++  WD +   +  
Sbjct: 36  ASGIYTWMPIGLKVLQKIQNIVREEMNKAGASELLLPSVLPSELLQETHRWDKFGPELLK 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +K   +     R F   P +    V +    +KSY++LP+ L +  + +R+E      G+
Sbjct: 96  LKDRHE-----RDFCYGPTHEEPIVDMARDTIKSYKQLPLNLYQIQTKFRDEIRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKDFGF 420
           MR R F   DA+ F    E + N   K+H    +I    G 
Sbjct: 150 MRAREFIMKDAYSFHENSECLHNTYNKMHETYCNILDKIGL 190


>gi|156935287|ref|YP_001439203.1| prolyl-tRNA synthetase [Cronobacter sakazakii ATCC BAA-894]
 gi|166980122|sp|A7MI22|SYP_ENTS8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|156533541|gb|ABU78367.1| hypothetical protein ESA_03144 [Cronobacter sakazakii ATCC BAA-894]
          Length = 572

 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 7/144 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E++ P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYTWLPTGLRVLKKVENIVREEMNNAGAIEVSMPVVQPAELWQESGRWEQYGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
                D     R F L P +      +  + L SY++LP+   +  + +R+E      G+
Sbjct: 96  FVDRGD-----RAFVLGPTHEEVITDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNEC 404
           MR R F   DA+ F T ++   + 
Sbjct: 150 MRSREFLMKDAYSFHTTQESLQQT 173


>gi|167037133|ref|YP_001664711.1| phosphoribulokinase/uridine kinase [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|320115553|ref|YP_004185712.1| AAA ATPase [Thermoanaerobacter brockii subsp. finnii Ako-1]
 gi|166855967|gb|ABY94375.1| phosphoribulokinase/uridine kinase [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|319928644|gb|ADV79329.1| AAA ATPase [Thermoanaerobacter brockii subsp. finnii Ako-1]
          Length = 547

 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 47/187 (25%), Positives = 85/187 (45%), Gaps = 3/187 (1%)

Query: 12  GSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSL 70
           G I  +P      D+A+          VA  +N ++ DL+  V ++ ++E +        
Sbjct: 7   GDIYEYPEGTKLEDIAKDFEHLYNGIIVAAKVNNELVDLNCTVSKDSTVEFVDTTIEEGT 66

Query: 71  AVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEII 130
            + R S   +  +AV+ + P   V I   +  G Y +       ++  ++ I+K+M+EII
Sbjct: 67  RIYRRSLTFVFIKAVKELLPGATVTIEHSLGKGLYCEIHGYS-LNNKIVSMIKKRMEEII 125

Query: 131 ARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRS 190
            +D    ++ L  E+A +LFE +    KV++ +    K+ V +Y      D    P V S
Sbjct: 126 EKDLKIERKMLPKEEAIKLFEKEGLTEKVKLFKDT-DKDKVPVYYCDGTVDFFYSPCVPS 184

Query: 191 TGQVKKF 197
           TG +K F
Sbjct: 185 TGYLKVF 191


>gi|168334910|ref|ZP_02693030.1| prolyl-tRNA synthetase [Epulopiscium sp. 'N.t. morphotype B']
          Length = 570

 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 72/141 (51%), Gaps = 13/141 (9%)

Query: 288 KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
           K D +E+  P VL   LWQ+SG ++S  + +  +K  D T KDL    +       H+A 
Sbjct: 63  KIDGQEVIFPVVLPGELWQESGRFESVGSELLRMK--DRTDKDL-VLGMTHEEAAVHLA- 118

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQ----MFNE 403
                KSY + P  + +  + +R+E   S  GL+RVR FT  DA+ F T  +     +++
Sbjct: 119 -RSEAKSYTQYPFMIYQIQTKFRDEAR-SRGGLIRVREFTMKDAYSFHTSNEDLDAYYDK 176

Query: 404 CLKIHNLIISIYKDFGFEKIM 424
           CLK +N    IY+  G  +++
Sbjct: 177 CLKAYN---EIYRRTGVPEVV 194


>gi|254284280|ref|ZP_04959248.1| prolyl-tRNA synthetase [gamma proteobacterium NOR51-B]
 gi|219680483|gb|EED36832.1| prolyl-tRNA synthetase [gamma proteobacterium NOR51-B]
          Length = 564

 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 65/134 (48%), Gaps = 7/134 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            +G+  W   G ++ + + + +R ++ +    EI  P V    LWQ+SG W+ Y   +  
Sbjct: 40  AAGIYTWMPLGLRVLRRVEAVVREEMNNAGALEITMPVVQPAELWQESGRWEQYGPELAR 99

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           ++   D     R F L P +     A+    +KSY++LP+ L +  + +R+E      G+
Sbjct: 100 LRDRHD-----REFCLGPTHEEVVSALARSEIKSYKQLPLNLYQIQTKFRDEVRPRF-GV 153

Query: 381 MRVRGFTQDDAHVF 394
           MR R F   DA+ F
Sbjct: 154 MRSREFIMKDAYSF 167


>gi|288904427|ref|YP_003429648.1| prolyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
 gi|306830460|ref|ZP_07463630.1| proline--tRNA ligase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325977424|ref|YP_004287140.1| prolyl-tRNA synthetase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|288731152|emb|CBI12700.1| prolyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
 gi|304427485|gb|EFM30587.1| proline--tRNA ligase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325177352|emb|CBZ47396.1| proS [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069]
          Length = 618

 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 55/102 (53%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L+  LW++SG +++Y  +++ +K      +D   F L P +     ++    +
Sbjct: 68  EMLAPALLNADLWRESGRYETYGEDLYKLKN-----RDKSDFILGPTHEETFTSLVRDAV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +  S YR+E     +GL+R R F   D + F
Sbjct: 123 KSYKQLPLNLYQIQSKYRDEKR-PRNGLLRTREFIMKDGYSF 163


>gi|322373816|ref|ZP_08048351.1| proline--tRNA ligase [Streptococcus sp. C150]
 gi|321277188|gb|EFX54258.1| proline--tRNA ligase [Streptococcus sp. C150]
          Length = 620

 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 54/102 (52%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  +++ +K      +D   F L P +     A+    +
Sbjct: 68  EMLAPALLTADLWRESGRYETYGEDLYKLKN-----RDKSDFILGPTHEETFTALVRDAV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +  S YR+E     +GL+R R F   D + F
Sbjct: 123 KSYKQLPLNLYQIQSKYRDEKR-PRNGLLRTREFIMKDGYSF 163


>gi|306832697|ref|ZP_07465834.1| proline--tRNA ligase [Streptococcus bovis ATCC 700338]
 gi|304425153|gb|EFM28282.1| proline--tRNA ligase [Streptococcus bovis ATCC 700338]
          Length = 618

 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 55/102 (53%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L+  LW++SG +++Y  +++ +K      +D   F L P +     ++    +
Sbjct: 68  EMLAPALLNADLWRESGRYETYGEDLYKLKN-----RDKSDFILGPTHEETFTSLVRDAV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +  S YR+E     +GL+R R F   D + F
Sbjct: 123 KSYKQLPLNLYQIQSKYRDEKR-PRNGLLRTREFIMKDGYSF 163


>gi|217076405|ref|YP_002334121.1| prolyl-tRNA synthetase [Thermosipho africanus TCF52B]
 gi|226701439|sp|B7IFB6|SYP_THEAB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|217036258|gb|ACJ74780.1| prolyl-tRNA synthetase [Thermosipho africanus TCF52B]
          Length = 561

 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 40/139 (28%), Positives = 65/139 (46%), Gaps = 14/139 (10%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           +EI  P +    LWQ+SG WD Y   M  +K   +     R F L P +      +  + 
Sbjct: 67  QEILMPIIQPAELWQRSGRWDDYGPEMMKLKDRHN-----RDFTLGPTHEELVTELIRNE 121

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI 411
           L SY++LPV L +  + +R+E      G++R R F   DA+ F    +  +E  +     
Sbjct: 122 LNSYKQLPVSLYQITTKFRDEIRPRF-GVLRAREFIMKDAYSFHDSWESLDETYQ----- 175

Query: 412 ISIYKDFGFEKIMVKLSTR 430
             ++KD  + KIM ++  R
Sbjct: 176 --LFKD-AYSKIMERIGLR 191


>gi|213423623|ref|ZP_03356603.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E01-6750]
          Length = 322

 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 69/144 (47%), Gaps = 7/144 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E++ P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYTWLPTGLRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGRWEQYGPEL-- 93

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           ++  D   +  R F L P +      +  + L SY++LP+   +  + +R+E      G+
Sbjct: 94  LRFVD---RGERPFVLGPTHEEVITDLVRNELSSYKQLPLNFFQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNEC 404
           MR R F   DA+ F T ++   E 
Sbjct: 150 MRSREFLMKDAYSFHTSQESLQET 173


>gi|48478436|ref|YP_024142.1| prolyl-tRNA synthetase [Picrophilus torridus DSM 9790]
 gi|74579482|sp|Q6KZA3|SYP_PICTO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|48431084|gb|AAT43949.1| prolyl-tRNA synthetase [Picrophilus torridus DSM 9790]
          Length = 466

 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 82/376 (21%), Positives = 161/376 (42%), Gaps = 67/376 (17%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ-HLWQQSGHWDSYRANMFAV 321
           G+  W   G KI + + + +R  + +  ++E++ P ++ +  L  +  H   +   ++ V
Sbjct: 30  GMNVWLPYGLKIMRLIDNIIRDNVDNKSFQEVSFPVLITRSQLETEFEHIKGFENEIYWV 89

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
                   D+   AL+P +      +F   ++S+++LP+++ +  SVYR E   +    +
Sbjct: 90  TKGGSEKLDIE-LALRPTSESAMYTMFPLWIRSHQDLPLKIYQIVSVYRYETKHT-RSFI 147

Query: 382 RVRG---FTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMV--KLSTRPEKRV 435
           RVR    F    AHV +   E+  +E + I + I         EK+ +   +  RP+   
Sbjct: 148 RVREIHFFEAHTAHVDYGDAERQMSEYMDIWSSIA--------EKLCLPYNIDMRPD--- 196

Query: 436 GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGT 495
                WD                             GA Y   F+ ++    GR  Q GT
Sbjct: 197 -----WDKFP--------------------------GAKYTLAFDTLMPS--GRSLQIGT 223

Query: 496 I-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF----IGIMIENFKGNLPLWL 550
           I +   N    ++  Y++ + +  +   + +  FG  ER     IGI  ++    LP  +
Sbjct: 224 IHEYGENFARNYDIKYLDINGDLKY---VSQTTFGLSERLLAAVIGIHGDDTGLILPASI 280

Query: 551 SPIQAIVTTITSSA----VEYAQEIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPI 605
           +P+QAI+  I   +    ++Y+ +I ++LK  ++  E D R N T  YK  +  ++ +P+
Sbjct: 281 APVQAIIIPIPGKSFKEVLDYSGKILSMLKDINVRAEIDSRENYTPGYKYNDWEMRGVPL 340

Query: 606 IIICGDKEASERSIGI 621
            I  G +E    ++ +
Sbjct: 341 RIEIGSREMESSTVTV 356


>gi|282854645|ref|ZP_06263980.1| proline--tRNA ligase [Propionibacterium acnes J139]
 gi|282582227|gb|EFB87609.1| proline--tRNA ligase [Propionibacterium acnes J139]
          Length = 585

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/198 (24%), Positives = 94/198 (47%), Gaps = 19/198 (9%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   HR L R   +  +A    GV  W   G ++ + + +  R ++ +   +E++ P 
Sbjct: 19  DAEVPSHRWLVRAGYIRRVA---PGVYSWLPLGLRVMRRIEAICREEMANIGAQEVSFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L    ++++G W  Y  N+F        +KD +   +  +  P H  +F   +K    S
Sbjct: 76  LLASDPYKETGRWVEYGDNLF-------RLKDRKGVDM--LLGPTHEEMFTLMVKDLYSS 126

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH-NLIIS 413
           Y++LP+ L +  + YR+E +    G++R R F   DA+ F   ++  +E  +   +  I 
Sbjct: 127 YKDLPLCLYQIQNKYRDE-ARPRAGILRGREFVMMDAYSFDVAQEGLDEAYQAQRDAYIR 185

Query: 414 IYKDFGFEKIMVKLSTRP 431
           I+   GF+  +VK  + P
Sbjct: 186 IFNRLGFDYAIVKAMSGP 203


>gi|261417283|ref|YP_003250966.1| prolyl-tRNA synthetase [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261373739|gb|ACX76484.1| prolyl-tRNA synthetase [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|302327884|gb|ADL27085.1| proline--tRNA ligase [Fibrobacter succinogenes subsp. succinogenes
           S85]
          Length = 564

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 80/160 (50%), Gaps = 8/160 (5%)

Query: 272 GWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G+++ Q +++ +R ++ K    E++ P V    LW +SG + +    +   K  ++    
Sbjct: 46  GYRVIQKIVNIIREEMNKIGGIEVDLPVVQTAELWSESGRYQAIGEELLRFKDRNN---- 101

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
                L   +      +  + L SY++LPV L +F + YR+E + +  GL+RVR F   D
Sbjct: 102 -HNMVLAMTHEEAMTDLVRYVLNSYKQLPVMLYQFKTKYRDE-ARARGGLIRVREFLMKD 159

Query: 391 AHVFCT-KEQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
           A+ F T +E +     + ++  + IY+  G E ++V+  T
Sbjct: 160 AYSFHTSQEDLDRHYQEEYDAYLRIYRRVGIEPVVVQSDT 199


>gi|297587908|ref|ZP_06946552.1| proline--tRNA ligase [Finegoldia magna ATCC 53516]
 gi|297574597|gb|EFH93317.1| proline--tRNA ligase [Finegoldia magna ATCC 53516]
          Length = 576

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 40/168 (23%), Positives = 83/168 (49%), Gaps = 12/168 (7%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDY--EEINT 296
           +++E   H+ L R      I +  +G+  +   G++I + + + +R ++ D+Y  +EI+ 
Sbjct: 16  QDAEIASHKLLLRAG---MIRKTAAGLYSYLPLGYRIVRKVENIVREEM-DNYGSQEIHM 71

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P    + +W++SG W ++   MF ++  ++     R F L P        +    +KSY+
Sbjct: 72  PVTQPREIWEESGRWKTFGPEMFKLQDRNN-----REFCLGPTAEEYFTDLVKGEIKSYK 126

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           +LP+ + +  + YR+E      G+ R R F  +D++ F   E+   E 
Sbjct: 127 QLPLNIYQIQTKYRDEKRPRF-GINRSREFLMEDSYTFDVDEEAMREA 173


>gi|119946895|ref|YP_944575.1| prolyl-tRNA synthetase [Psychromonas ingrahamii 37]
 gi|152112944|sp|A1SZR1|SYP_PSYIN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|119865499|gb|ABM04976.1| prolyl-tRNA synthetase [Psychromonas ingrahamii 37]
          Length = 571

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 73/166 (43%), Gaps = 16/166 (9%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E+  P V    LW ++G WD Y   +  
Sbjct: 36  ASGLYTWLPTGLRVLRKVETIVREEMERAGGVEVLMPIVQPADLWLETGRWDQYGGELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +K      +  R F L P +      +    + SY++LP+ L +  + +R+E      G+
Sbjct: 96  IKD-----RHTRDFVLGPTHEEVITELVRKEVNSYKQLPLNLFQIQTKFRDETRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECL-----KIHNLIISIYKDFGFE 421
           MR R FT  DA+ F     M   CL     K+ +    I+   G E
Sbjct: 150 MRAREFTMKDAYSF----HMDQACLEKTYQKMFDAYCRIFDRLGLE 191


>gi|55820298|ref|YP_138740.1| prolyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
 gi|55822188|ref|YP_140629.1| prolyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
 gi|81820361|sp|Q5M1N3|SYP_STRT1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|81820523|sp|Q5M674|SYP_STRT2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|55736283|gb|AAV59925.1| prolyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
 gi|55738173|gb|AAV61814.1| prolyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
          Length = 620

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 54/102 (52%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  +++ +K      +D   F L P +      +    +
Sbjct: 68  EMLAPALLTADLWRESGRYETYGEDLYKLKN-----RDKSDFILGPTHEETFTVLVRDAV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +  S YR+E     +GL+R R F   DA+ F
Sbjct: 123 KSYKQLPLNLYQIQSKYRDEKR-PRNGLLRTREFIMKDAYSF 163


>gi|314923910|gb|EFS87741.1| prolyl-tRNA synthetase [Propionibacterium acnes HL001PA1]
 gi|314966030|gb|EFT10129.1| prolyl-tRNA synthetase [Propionibacterium acnes HL082PA2]
 gi|314981915|gb|EFT26008.1| prolyl-tRNA synthetase [Propionibacterium acnes HL110PA3]
 gi|315090730|gb|EFT62706.1| prolyl-tRNA synthetase [Propionibacterium acnes HL110PA4]
 gi|315094978|gb|EFT66954.1| prolyl-tRNA synthetase [Propionibacterium acnes HL060PA1]
 gi|315104203|gb|EFT76179.1| prolyl-tRNA synthetase [Propionibacterium acnes HL050PA2]
 gi|327328087|gb|EGE69856.1| proline--tRNA ligase [Propionibacterium acnes HL103PA1]
          Length = 581

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/198 (24%), Positives = 94/198 (47%), Gaps = 19/198 (9%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   HR L R   +  +A    GV  W   G ++ + + +  R ++ +   +E++ P 
Sbjct: 15  DAEVPSHRWLVRAGYIRRVA---PGVYSWLPLGLRVMRRIEAICREEMANIGAQEVSFPA 71

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L    ++++G W  Y  N+F        +KD +   +  +  P H  +F   +K    S
Sbjct: 72  LLASDPYKETGRWVEYGDNLF-------RLKDRKGVDM--LLGPTHEEMFTLMVKDLYSS 122

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH-NLIIS 413
           Y++LP+ L +  + YR+E +    G++R R F   DA+ F   ++  +E  +   +  I 
Sbjct: 123 YKDLPLCLYQIQNKYRDE-ARPRAGILRGREFVMMDAYSFDVAQEGLDEAYQAQRDAYIR 181

Query: 414 IYKDFGFEKIMVKLSTRP 431
           I+   GF+  +VK  + P
Sbjct: 182 IFNRLGFDYAIVKAMSGP 199


>gi|260596616|ref|YP_003209187.1| prolyl-tRNA synthetase [Cronobacter turicensis z3032]
 gi|260215793|emb|CBA28231.1| Prolyl-tRNA synthetase [Cronobacter turicensis z3032]
          Length = 572

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 7/144 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E++ P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYTWLPTGLRVLKKVENIVREEMNNAGAIEVSMPVVQPAELWQESGRWEQYGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
                D     R F L P +      +  + L SY++LP+   +  + +R+E      G+
Sbjct: 96  FVDRGD-----RAFVLGPTHEEVITDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNEC 404
           MR R F   DA+ F T ++   + 
Sbjct: 150 MRSREFLMKDAYSFHTTQESLQQT 173


>gi|164686598|ref|ZP_02210626.1| hypothetical protein CLOBAR_00190 [Clostridium bartlettii DSM
           16795]
 gi|164604327|gb|EDQ97792.1| hypothetical protein CLOBAR_00190 [Clostridium bartlettii DSM
           16795]
          Length = 566

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 66/133 (49%), Gaps = 7/133 (5%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG+      G ++F+ +   +R ++     +EI+   ++   LWQ+SG WD     MF +
Sbjct: 32  SGIYNQLPMGIRVFRKVEDIIREEMNAKGAQEISCALLVPAELWQESGRWDVMGPEMFRL 91

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           K      ++ R + L P +      +  + + SY++LP+ L +  + +R+E      G+M
Sbjct: 92  KD-----RNGRDYCLGPTHEETFTHIVRNEITSYKQLPLNLYQIETKFRDERRPRF-GVM 145

Query: 382 RVRGFTQDDAHVF 394
           R R FT  DA+ F
Sbjct: 146 RTRNFTMKDAYSF 158


>gi|293603409|ref|ZP_06685836.1| proline--tRNA ligase [Achromobacter piechaudii ATCC 43553]
 gi|292818182|gb|EFF77236.1| proline--tRNA ligase [Achromobacter piechaudii ATCC 43553]
          Length = 576

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 81/177 (45%), Gaps = 13/177 (7%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQ 298
           E+E   H+ + R   +  +A    G+  +   G KI + + + +R ++      E+  P 
Sbjct: 17  EAEVASHQLMTRAGMIRKLA---GGIYTYMPLGLKIIRKVEAIVREEMNASGAIELLMPV 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    LWQ+SG W+ Y A +  +K      +  R F L+P +      +  + + SYR+L
Sbjct: 74  VQPAELWQESGRWEQYGAELLRIKD-----RHQRDFVLQPTSEEVITDIARNEIHSYRQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           P+      + +R+E      GLMR R FT  DA+ F   E      LK ++ + + Y
Sbjct: 129 PLNFYHIQTKFRDERRPRF-GLMRGREFTMKDAYSFDRDEA---GALKSYDTMYAAY 181


>gi|213648168|ref|ZP_03378221.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. J185]
          Length = 306

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 69/144 (47%), Gaps = 7/144 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E++ P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYTWLPTGLRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGRWEQYGPEL-- 93

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           ++  D   +  R F L P +      +  + L SY++LP+   +  + +R+E      G+
Sbjct: 94  LRFVD---RGERPFVLGPTHEEVITDLVRNELSSYKQLPLNFFQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNEC 404
           MR R F   DA+ F T ++   E 
Sbjct: 150 MRSREFLMKDAYSFHTSQESLQET 173


>gi|26987940|ref|NP_743365.1| prolyl-tRNA synthetase [Pseudomonas putida KT2440]
 gi|81840777|sp|Q88NK2|SYP_PSEPK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|24982651|gb|AAN66829.1|AE016311_9 prolyl-tRNA synthetase [Pseudomonas putida KT2440]
          Length = 571

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 44/194 (22%), Positives = 87/194 (44%), Gaps = 10/194 (5%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           +QYL   ++    D   ++ ++ L    I +  SG+  W   G ++ + + + +R ++  
Sbjct: 4   SQYLLATQKETPADAVVISHQLMLRAGMIRKLASGLYTWLPMGLRVMRKVEAVVREEMNA 63

Query: 290 DYE-EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
               E+  P +    LWQ+SG W+ Y   +  +K      +  R F + P +      + 
Sbjct: 64  AGALEVLMPSIQPAELWQESGRWEQYGPELLRLKD-----RHQRDFCVGPTHEEVITDLA 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KI 407
            + L SY++LP+ L +  + +R+E      GLMR R F   DA+ F   +    E   ++
Sbjct: 119 RNELSSYKQLPLNLYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSFHADQASLQETYDRM 177

Query: 408 HNLIISIYKDFGFE 421
           H    +++   G +
Sbjct: 178 HQAYSNVFTRLGLD 191


>gi|197286110|ref|YP_002151982.1| prolyl-tRNA synthetase [Proteus mirabilis HI4320]
 gi|227357229|ref|ZP_03841586.1| prolyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
 gi|226701319|sp|B4F249|SYP_PROMH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|194683597|emb|CAR44486.1| prolyl-tRNA synthetase [Proteus mirabilis HI4320]
 gi|227162492|gb|EEI47481.1| prolyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
          Length = 571

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 39/162 (24%), Positives = 74/162 (45%), Gaps = 8/162 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + +   +R ++ +    EI+ P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYDWMPTGVRVLRKIEKIVREEMDNAGSLEISMPVVQPADLWQESGRWEQYGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
                 T +  R F L P +      +  + + SY++LP+ L +  + +R+E      G+
Sbjct: 96  F-----TDRGERPFVLGPTHEEVVTDIVRNEITSYKQLPLNLYQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFE 421
           MR R F   DA+ F   ++   E   +++    +I+   G +
Sbjct: 150 MRSREFIMKDAYSFHISQESLQETYDRMYQAYSNIFTRIGLD 191


>gi|117619295|ref|YP_858106.1| prolyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila ATCC
           7966]
 gi|152074744|sp|A0KPA5|SYP_AERHH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|117560702|gb|ABK37650.1| prolyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila ATCC
           7966]
          Length = 574

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 39/160 (24%), Positives = 74/160 (46%), Gaps = 8/160 (5%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG+  W   G ++ + + + +R ++ +    E++ P V    LWQ+SG WD Y   +  +
Sbjct: 37  SGMYAWLPSGLRVLKKIENIVREEMNNAGAIEVSMPVVQPAELWQESGRWDDYGPELCRL 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
                T +  R F L P +     ++  + + SY++LP+ L +  + +R+E      G+M
Sbjct: 97  -----TDRHNRPFVLGPTHEEVITSLVRYEVNSYKQLPLNLYQIQTKFRDEVRPRF-GVM 150

Query: 382 RVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGF 420
           R R F   DA+ F   K  +     ++H    + +   G 
Sbjct: 151 RGREFLMKDAYSFHIDKASLIETYERMHAAYCAAFTRMGL 190


>gi|148546477|ref|YP_001266579.1| prolyl-tRNA synthetase [Pseudomonas putida F1]
 gi|166980143|sp|A5VZT5|SYP_PSEP1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|148510535|gb|ABQ77395.1| prolyl-tRNA synthetase [Pseudomonas putida F1]
          Length = 571

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 44/194 (22%), Positives = 87/194 (44%), Gaps = 10/194 (5%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           +QYL   ++    D   ++ ++ L    I +  SG+  W   G ++ + + + +R ++  
Sbjct: 4   SQYLLATQKETPADAVVISHQLMLRAGMIRKLASGLYTWLPMGLRVMRKVEAVVREEMNA 63

Query: 290 DYE-EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
               E+  P +    LWQ+SG W+ Y   +  +K      +  R F + P +      + 
Sbjct: 64  AGALEVLMPSIQPAELWQESGRWEQYGPELLRLKD-----RHQRDFCVGPTHEEVITDLA 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KI 407
            + L SY++LP+ L +  + +R+E      GLMR R F   DA+ F   +    E   ++
Sbjct: 119 RNELSSYKQLPLNLYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSFHADQASLQETYDRM 177

Query: 408 HNLIISIYKDFGFE 421
           H    +++   G +
Sbjct: 178 HQAYSNVFTRLGLD 191


>gi|82701584|ref|YP_411150.1| prolyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
 gi|114152221|sp|Q2YBW3|SYP_NITMU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|82409649|gb|ABB73758.1| prolyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
          Length = 569

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 8/170 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           GSG+  W   G K+ + + + +R ++      E+  P V    LW+++G WD +   M  
Sbjct: 36  GSGLYTWMPLGLKVLRKVENIVREEMDAAGALELLMPAVQPAELWRETGRWDVFGPQMLK 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           ++   +     R F   P +      +    +KSYR+LP+   +  + +R+E      G+
Sbjct: 96  IRDRHE-----RDFCFGPTHEEVITDIARREIKSYRQLPLNFYQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDFGFEKIMVKLST 429
           MR R F   DA+ F T      E  + +H     I+   G +   VK  T
Sbjct: 150 MRAREFVMKDAYSFHTDIPSLEETYQAMHVAYCRIFDRLGLKFRPVKADT 199


>gi|157147374|ref|YP_001454693.1| prolyl-tRNA synthetase [Citrobacter koseri ATCC BAA-895]
 gi|166980115|sp|A8AL94|SYP_CITK8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|157084579|gb|ABV14257.1| hypothetical protein CKO_03172 [Citrobacter koseri ATCC BAA-895]
          Length = 572

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 7/144 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E++ P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYTWLPTGLRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELL- 94

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +  D   +  R F L P +      +  + L SY++LP+   +  + +R+E      G+
Sbjct: 95  -RFVD---RGERPFVLGPTHEEVITDLIRNELSSYKQLPLNFFQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNEC 404
           MR R F   DA+ F T ++   E 
Sbjct: 150 MRSREFLMKDAYSFHTSQESLQET 173


>gi|330718639|ref|ZP_08313239.1| prolyl-tRNA synthetase [Leuconostoc fallax KCTC 3537]
          Length = 572

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/146 (22%), Positives = 71/146 (48%), Gaps = 7/146 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            +G+  +     ++   + + +R ++ K D  E++ P++L   LWQ+SG + +Y   ++ 
Sbjct: 36  AAGMFSYLPLAQRVLNKIEAIVREEMAKIDANEMSVPEILPAELWQESGRYATYGPALYK 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            K   +     R F L P +      +    +KSY++LP+ + +  + +R+E      GL
Sbjct: 96  FKNRQN-----RDFILGPTHEETFTQLMRDDIKSYKKLPLLVYQIQAKFRDENRPRF-GL 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLK 406
           +R R F   DA+ F   ++  ++  +
Sbjct: 150 LRTREFIMKDAYSFSADQEGLDDAYR 175


>gi|254483545|ref|ZP_05096771.1| prolyl-tRNA synthetase [marine gamma proteobacterium HTCC2148]
 gi|214036202|gb|EEB76883.1| prolyl-tRNA synthetase [marine gamma proteobacterium HTCC2148]
          Length = 580

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/162 (22%), Positives = 75/162 (46%), Gaps = 8/162 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            +G+  W   G ++ + + + +R ++     +E++ P V    LWQ+SG W+ Y + +  
Sbjct: 46  AAGLYSWLPLGLRVLRKVENVVREEMNAAGAQEVSMPVVQPAELWQESGRWEQYGSELLR 105

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           ++      +  R F L P +      +  + +KSY++LP+ + +  +  R+E      G+
Sbjct: 106 IQD-----RHQRDFCLGPTHEEVITDLIRNEVKSYKQLPLNMYQIQTKVRDEIRPRF-GI 159

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKI-HNLIISIYKDFGFE 421
           MR R F   DA+ F   +    +  +I H     ++   G +
Sbjct: 160 MRSREFLMKDAYSFHASQASLEDTYQIMHGAYTKVFTRLGLD 201


>gi|145297802|ref|YP_001140643.1| prolyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
           A449]
 gi|166980094|sp|A4SJ23|SYP_AERS4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|142850574|gb|ABO88895.1| prolyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
           A449]
          Length = 574

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 39/160 (24%), Positives = 74/160 (46%), Gaps = 8/160 (5%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG+  W   G ++ + + + +R ++ +    E++ P V    LWQ+SG WD Y   +  +
Sbjct: 37  SGMYAWLPSGLRVLKKIENIVREEMNNAGAIEVSMPVVQPAELWQESGRWDDYGPELCRL 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
                T +  R F L P +     ++  + + SY++LP+ L +  + +R+E      G+M
Sbjct: 97  -----TDRHNRPFVLGPTHEEVITSLVRYEVNSYKQLPLNLYQIQTKFRDEVRPRF-GVM 150

Query: 382 RVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGF 420
           R R F   DA+ F   K  +     ++H    + +   G 
Sbjct: 151 RGREFLMKDAYSFHIDKASLIETYERMHAAYCAAFTRMGL 190


>gi|160872889|ref|ZP_02063021.1| prolyl-tRNA synthetase [Rickettsiella grylli]
 gi|159121688|gb|EDP47026.1| prolyl-tRNA synthetase [Rickettsiella grylli]
          Length = 572

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 42/184 (22%), Positives = 87/184 (47%), Gaps = 11/184 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDY-EEINTPQ 298
           ++E + H+ + R   +  +A   SG+  W   G ++ + + + +R ++   + +E+  P 
Sbjct: 17  DAEIKSHQLMLRAGMIRKVA---SGIYSWLPLGLRVLRKVETIVREEMNRIHAQEVLLPI 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+S  W++Y   +  +     T +  R F L P +     A+  H ++SY++L
Sbjct: 74  LQPAELWQESERWEAYGPELLRL-----TDRHQRAFCLGPTHEEIITALVRHEVRSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKD 417
           P+   +  + +R+E      G+MR R F   DA+ F   +   +E  + +H     I+  
Sbjct: 129 PLIFYQIQTKFRDEIRPRF-GVMRAREFMMKDAYSFHPDKTSLSETYQMMHASYCRIFTR 187

Query: 418 FGFE 421
            G +
Sbjct: 188 LGLK 191


>gi|224044294|ref|XP_002187025.1| PREDICTED: mitochondrial ribosomal protein L39 [Taeniopygia
           guttata]
          Length = 337

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 91/190 (47%), Gaps = 20/190 (10%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT--PEDPRSL-AVIRHS 76
           +T  + A  +S    K +V  +++G++ D+  P+ +   I+ +T   EDP  +      S
Sbjct: 72  STPYNCAMHLSEWHCKNSVLASVDGEIWDMYRPLTKSCEIQFLTFKDEDPEEVNKAYWRS 131

Query: 77  CAHIMAEAVQSIWPE------VQVAIGPIIEDGFYYDFDKEQPF-----SSDELAQIEKK 125
           CA IMA  ++  + +      V+    P+I   F  D   +        ++D    + + 
Sbjct: 132 CAMIMACVLERAFKDEYSVNLVKTPEVPVISGAFCCDVVLDNKLNDWKPTNDNFCSLTRD 191

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN---VTLYRQGEWFDL 182
            +++I +D PF   ++  + ARE+F+     YK+E++E   A+     V LYR G++ D+
Sbjct: 192 AKKLIHQDLPFETLHVEAKVAREMFQHN--VYKMEMIERKAAQNMEGIVPLYRFGDFVDV 249

Query: 183 CRGPHVRSTG 192
             GPH+  T 
Sbjct: 250 SEGPHIPRTS 259


>gi|194290784|ref|YP_002006691.1| prolyl-tRNA synthetase [Cupriavidus taiwanensis LMG 19424]
 gi|226699135|sp|B3R894|SYP_CUPTR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|193224619|emb|CAQ70630.1| prolyl-tRNA synthetase [Cupriavidus taiwanensis LMG 19424]
          Length = 573

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/162 (22%), Positives = 79/162 (48%), Gaps = 8/162 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           G+G+  +   G ++ + + + +R ++ +    E++ P +    LWQ++G WD     +  
Sbjct: 36  GAGIYNYMPIGLRVIRKVENIVREEMNRAGAVELSMPVIQPAELWQETGRWDKMGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +K   +     R FA++P +      +    ++SY++LPV   +  + +R+E      G+
Sbjct: 96  LKDRHE-----RDFAVQPTSEEVVTDIARSEIRSYKQLPVNFYQIQTKFRDERRPRF-GI 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDFGFE 421
           MR R FT  DA+ F        +  + +++  + I++ FG E
Sbjct: 150 MRGREFTMKDAYSFDRDTDGLRKSYENMYDAYVRIFRRFGLE 191


>gi|114152886|sp|O28664|SYP_ARCFU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
          Length = 471

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 81/374 (21%), Positives = 157/374 (41%), Gaps = 60/374 (16%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVL-DQHLWQQSGHWDSYRANMFAVK 322
           G+  W   G+KI Q + S +R  +  +++E+  P ++ +  L ++  H   +   ++ + 
Sbjct: 31  GLYVWFPFGFKIRQLVYSKLREIMDREHDEVYFPALIPETELGKEGEHIKGFEDEVYWIT 90

Query: 323 CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMR 382
               T  D++  AL+P +      +F   ++++ +LP+++ +  + +R E +     L+R
Sbjct: 91  HGGLTPLDVK-LALRPTSETAMYPMFRLWVRNHADLPLKVYQIVNTFRYE-TKHTRPLIR 148

Query: 383 VRGFTQ-DDAHVFCTKEQMFNECLKIHNLIISIYKDF-GFEKIMVKLSTRPEKRVGSDAL 440
           +R  T   +AH   T  + F E  +     I  YK+F  F  I   +  RPE        
Sbjct: 149 LREITSFKEAH---TVHKDFEEAAEHVKKAIGFYKEFYDFLAIPYMVIRRPE-------- 197

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI-QVD 499
           WD                             GA Y   F+ I+ D  GR  Q GT+  + 
Sbjct: 198 WDKF--------------------------PGAAYTIAFDTIMPD--GRTLQIGTVHHLA 229

Query: 500 FNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQA 555
            N    F+  Y   + E  +    H+  +G  ER I  +I    ++    LP  ++P+Q 
Sbjct: 230 DNFARTFDIKYEAPNGEHYYA---HQTCYGISERCIAALISVHGDDLGLVLPFEVAPVQI 286

Query: 556 IVTTIT-----SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           ++  I       + +E  +++A  LK+  + +  D   +    K  +  +K +PI    G
Sbjct: 287 VIIPILYKGKEEAVMEACRKLAEKLKAFRVVL--DEGEDRPGAKYYKWELKGVPIRFEIG 344

Query: 611 DKEASERSIGIRRF 624
            ++A E+ + +  F
Sbjct: 345 PRDA-EKGVAVVSF 357


>gi|30249296|ref|NP_841366.1| prolyl-tRNA synthetase [Nitrosomonas europaea ATCC 19718]
 gi|81838727|sp|Q82UZ8|SYP_NITEU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|30180615|emb|CAD85228.1| Prolyl-tRNA synthetase [Nitrosomonas europaea ATCC 19718]
          Length = 568

 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 70/156 (44%), Gaps = 10/156 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQ 298
           E+E   HR + R      I   GSG+  W   G +I   +   +R ++ +    E+  P 
Sbjct: 17  EAELISHRLMLRAG---LIKRLGSGLYTWMPLGLRILHKIEHIIREEMNNSGALELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    LWQ++G WD +   M  +K  D    D   F   P +    V +    +KSYR+L
Sbjct: 74  VHPAELWQETGRWDVFGPQM--LKIQDRHKHD---FCFGPTHEEVIVDIARREIKSYRQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           P+   +  + +R+E      G+MR R F   DA+ F
Sbjct: 129 PINFYQIQTKFRDEIRPRF-GVMRAREFIMKDAYSF 163


>gi|121997498|ref|YP_001002285.1| prolyl-tRNA synthetase [Halorhodospira halophila SL1]
 gi|152112924|sp|A1WUX1|SYP_HALHL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|121588903|gb|ABM61483.1| prolyl-tRNA synthetase [Halorhodospira halophila SL1]
          Length = 568

 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 40/160 (25%), Positives = 71/160 (44%), Gaps = 8/160 (5%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG+  W   G ++ Q +   +R ++ +    E+  P V    LWQ+SG W+ Y   +  +
Sbjct: 37  SGLYTWLPLGLRVLQKVERIVREEMNRAGALEVLMPAVQPAELWQESGRWEKYGPELLRI 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           +   D     R     P +      +F   ++SYR+LPV   +  + +R+E      G+M
Sbjct: 97  RDRHD-----REGCFGPTHEEVITDLFRREIRSYRQLPVNYYQIQTKFRDEIRPRF-GVM 150

Query: 382 RVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGF 420
           R R F   DA+ F    + +  E  ++H     I++  G 
Sbjct: 151 RAREFLMKDAYSFHLDDDDLRAEYQRMHEAYCRIFQRTGL 190


>gi|195108339|ref|XP_001998750.1| GI23457 [Drosophila mojavensis]
 gi|193915344|gb|EDW14211.1| GI23457 [Drosophila mojavensis]
          Length = 1709

 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 75/308 (24%), Positives = 117/308 (37%), Gaps = 58/308 (18%)

Query: 334  FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
             A++P +       +   ++SYR+LP+RL ++ +V R E        +R R F   + H 
Sbjct: 1310 IAVRPTSETVMYPAYAKWIQSYRDLPIRLNQWNNVVRWEFKHP-QPFLRTREFLWQEGHT 1368

Query: 394  -FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
             F TK++   E L+I +L   IY D     ++    T  EK  G D              
Sbjct: 1369 AFATKDEADKEVLEILDLYAQIYTDLLAIPVVKGRKTEKEKFAGGD-------------- 1414

Query: 453  DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYV 511
                                  Y    E  +  A GR  Q  T   +  N    F   Y 
Sbjct: 1415 ----------------------YTTTVEAFI-SASGRAIQGATSHHLGQNFSKMFEIVYE 1451

Query: 512  NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVT----TITSS 563
            +  ++      +H+  +G   R IG+MI     N  L L P    +QAIV     T+ + 
Sbjct: 1452 DPETQ--QKTYVHQNSWGITTRTIGVMIMVHADNQGLVLPPHVACVQAIVVPCGITVNTK 1509

Query: 564  AVEYAQ------EIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASE 616
              E A+      E+   L    +  E D+R N +  +K     +K +PI I  G K+   
Sbjct: 1510 DEERAELLGACKELECRLSGAGVRCEGDYRDNYSPGWKFNHWELKGVPIRIELGPKDMQA 1569

Query: 617  RSI-GIRR 623
            + I  +RR
Sbjct: 1570 KQIVAVRR 1577


>gi|300920118|ref|ZP_07136571.1| prolyl-tRNA synthetase [Escherichia coli MS 115-1]
 gi|300412852|gb|EFJ96162.1| prolyl-tRNA synthetase [Escherichia coli MS 115-1]
          Length = 572

 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 7/144 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E++ P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELL- 94

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +  D   +  R F L P +      +  + L SY++LP+   +  + +R+E      G+
Sbjct: 95  -RFVD---RGERPFVLGPTHEEVITDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNEC 404
           MR R F   DA+ F T ++   E 
Sbjct: 150 MRSREFLMKDAYSFHTSQESLQET 173


>gi|261344716|ref|ZP_05972360.1| hypothetical protein PROVRUST_05973 [Providencia rustigianii DSM
           4541]
 gi|282567158|gb|EFB72693.1| proline--tRNA ligase [Providencia rustigianii DSM 4541]
          Length = 576

 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 40/162 (24%), Positives = 77/162 (47%), Gaps = 8/162 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++++    E++ P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYDWLPTGVRVLRKVENIVREEMENAGAIEVSLPVVQPADLWQESGRWEQYGPELL- 94

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +  D   +  R F L P +      +  + + SY++LP+ L +  + +R+E      G+
Sbjct: 95  -RFVD---RGERPFVLGPTHEEVITDLVRNEITSYKQLPLNLFQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFE 421
           MR R F   DA+ F T ++   E    ++     I+   GF+
Sbjct: 150 MRSREFIMKDAYSFHTSQESLQETYDAMYEAYSKIFTRIGFD 191


>gi|161504638|ref|YP_001571750.1| prolyl-tRNA synthetase [Salmonella enterica subsp. arizonae serovar
           62:z4,z23:-- str. RSK2980]
 gi|189083510|sp|A9MPG5|SYP_SALAR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|160865985|gb|ABX22608.1| hypothetical protein SARI_02759 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 572

 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 7/144 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E++ P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYTWLPTGLRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELL- 94

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +  D   +  R F L P +      +  + L SY++LP+   +  + +R+E      G+
Sbjct: 95  -RFVD---RGERPFVLGPTHEEVITDLVRNELSSYKQLPLNFFQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNEC 404
           MR R F   DA+ F T ++   E 
Sbjct: 150 MRSREFLMKDAYSFHTSQESLQET 173


>gi|227122|prf||1614347A Pro-tRNA synthetase
          Length = 572

 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 7/144 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E++ P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELL- 94

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +  D   +  R F L P +      +  + L SY++LP+   +  + +R+E      G+
Sbjct: 95  -RFVD---RGERPFVLGPTHEEVITDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNEC 404
           MR R F   DA+ F T ++   E 
Sbjct: 150 MRSREFLMKDAYSFHTSQESLQET 173


>gi|48783|emb|CAA39134.1| ProRS [Escherichia coli]
 gi|147362|gb|AAA24420.1| prolyl-tRNA synthetase [Escherichia coli]
          Length = 572

 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 7/144 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E++ P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELL- 94

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +  D   +  R F L P +      +  + L SY++LP+   +  + +R+E      G+
Sbjct: 95  -RFVD---RGERPFVLGPTHEEVITDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNEC 404
           MR R F   DA+ F T ++   E 
Sbjct: 150 MRSREFLMKDAYSFHTSQESLQET 173


>gi|320180897|gb|EFW55819.1| prolyl-tRNA synthetase [Shigella boydii ATCC 9905]
          Length = 572

 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 7/144 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E++ P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELL- 94

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +  D   +  R F L P +      +  + L SY++LP+   +  + +R+E      G+
Sbjct: 95  -RFVD---RGERPFVLGPTHEEVITDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNEC 404
           MR R F   DA+ F T ++   E 
Sbjct: 150 MRSREFLMKDAYSFHTSQESLQET 173


>gi|309700402|emb|CBI99691.1| prolyl-tRNA synthetase [Escherichia coli ETEC H10407]
          Length = 572

 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 7/144 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E++ P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELL- 94

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +  D   +  R F L P +      +  + L SY++LP+   +  + +R+E      G+
Sbjct: 95  -RFVD---RGERPFVLGPTHEEVITDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNEC 404
           MR R F   DA+ F T ++   E 
Sbjct: 150 MRSREFLMKDAYSFHTSQESLQET 173


>gi|260866343|ref|YP_003232745.1| prolyl-tRNA synthetase [Escherichia coli O111:H- str. 11128]
 gi|257762699|dbj|BAI34194.1| prolyl-tRNA synthetase [Escherichia coli O111:H- str. 11128]
          Length = 572

 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 7/144 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E++ P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELL- 94

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +  D   +  R F L P +      +  + L SY++LP+   +  + +R+E      G+
Sbjct: 95  -RFVD---RGERPFVLGPTHEEVITDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNEC 404
           MR R F   DA+ F T ++   E 
Sbjct: 150 MRSREFLMKDAYSFHTSQESLQET 173


>gi|168182194|ref|ZP_02616858.1| putative threonyl-tRNA synthetase/uridine kinase [Clostridium
           botulinum Bf]
 gi|237793515|ref|YP_002861067.1| putative threonyl-tRNA synthetase/uridine kinase [Clostridium
           botulinum Ba4 str. 657]
 gi|182674718|gb|EDT86679.1| putative threonyl-tRNA synthetase/uridine kinase [Clostridium
           botulinum Bf]
 gi|229261032|gb|ACQ52065.1| putative threonyl-tRNA synthetase/uridine kinase [Clostridium
           botulinum Ba4 str. 657]
          Length = 552

 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 87/194 (44%), Gaps = 2/194 (1%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           +KL  P+GS        T  DV +          V   I+ +  +L+  V+ EG    + 
Sbjct: 4   LKLYMPNGSNILVSGDKTLYDVVKENKLEDNIPIVLGKIDEEYYELTSTVKKEGVFIPVD 63

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
             D   L     +   I  +AV  ++PE  V I   +  G Y +  K+   + +++ +I+
Sbjct: 64  ITDSIGLKTYVRTLQFIFIKAVLDLYPESTVVIEHSLGKGLYGEIHKKLSLNENDILKIK 123

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            KM EII +D    K  +  E+A E+F+  K   KV +L  IP +E V LY     +D  
Sbjct: 124 NKMNEIINKDIKIKKISVKKERAIEIFKEYKMKDKVRLLSHIPHEE-VKLYELDGRYDYF 182

Query: 184 RGPHVRSTGQVKKF 197
            GP   STG +K F
Sbjct: 183 YGPMAYSTGAIKNF 196


>gi|194435019|ref|ZP_03067260.1| prolyl-tRNA synthetase [Shigella dysenteriae 1012]
 gi|300902015|ref|ZP_07120042.1| prolyl-tRNA synthetase [Escherichia coli MS 84-1]
 gi|301305332|ref|ZP_07211428.1| prolyl-tRNA synthetase [Escherichia coli MS 124-1]
 gi|331651100|ref|ZP_08352128.1| proline--tRNA ligase [Escherichia coli M718]
 gi|331671699|ref|ZP_08372497.1| proline--tRNA ligase [Escherichia coli TA280]
 gi|194416755|gb|EDX32883.1| prolyl-tRNA synthetase [Shigella dysenteriae 1012]
 gi|300405901|gb|EFJ89439.1| prolyl-tRNA synthetase [Escherichia coli MS 84-1]
 gi|300839437|gb|EFK67197.1| prolyl-tRNA synthetase [Escherichia coli MS 124-1]
 gi|315254998|gb|EFU34966.1| prolyl-tRNA synthetase [Escherichia coli MS 85-1]
 gi|331051554|gb|EGI23603.1| proline--tRNA ligase [Escherichia coli M718]
 gi|331071544|gb|EGI42901.1| proline--tRNA ligase [Escherichia coli TA280]
 gi|332095137|gb|EGJ00169.1| prolyl-tRNA synthetase [Shigella boydii 5216-82]
 gi|332097597|gb|EGJ02574.1| prolyl-tRNA synthetase [Shigella dysenteriae 155-74]
          Length = 572

 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 7/144 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E++ P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELL- 94

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +  D   +  R F L P +      +  + L SY++LP+   +  + +R+E      G+
Sbjct: 95  -RFVD---RGERPFVLGPTHEEVITDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNEC 404
           MR R F   DA+ F T ++   E 
Sbjct: 150 MRSREFLMKDAYSFHTSQESLQET 173


>gi|320535524|ref|ZP_08035624.1| phosphoribulokinase / Uridine kinase family protein [Treponema
           phagedenis F0421]
 gi|320147585|gb|EFW39101.1| phosphoribulokinase / Uridine kinase family protein [Treponema
           phagedenis F0421]
          Length = 550

 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 100/200 (50%), Gaps = 5/200 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           S+  + FP+   K F V    +    +   ++ K    + +N ++  LS  +    S+E 
Sbjct: 2   SEFTIRFPNEQKKRF-VQPISAGALLAYMPNIDKTVYGMKVNNELVALSKTIDIRASVEP 60

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +         + R +   ++A A Q+++PE ++ +G  +   +YY  +       D   +
Sbjct: 61  VLKGTQEGSKIYRRTLCLLLAAASQALYPEQRLLVGHSLGYSYYYTLEGNNTEKID-FKK 119

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE+KM+E++  D P   ++LS+E+A E+F++  +    ++L  I +K  + + + G++ D
Sbjct: 120 IEEKMRELVEADIPIQTRWLSYEEAIEMFQNSNQPDTYKLLSYI-SKPKILINKLGDFHD 178

Query: 182 LCRGPHVRSTGQVKKFFKLM 201
           L   P +  TG+V K F+LM
Sbjct: 179 LFFQPVMDRTGEV-KVFELM 197


>gi|283783983|ref|YP_003363848.1| prolyl-tRNA synthetase [Citrobacter rodentium ICC168]
 gi|282947437|emb|CBG86984.1| prolyl-tRNA synthetase [Citrobacter rodentium ICC168]
          Length = 572

 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 77/170 (45%), Gaps = 8/170 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E++ P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYTWLPTGLRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELL- 94

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +  D   +  R F L P +      +  + L SY++LP+   +  + +R+E      G+
Sbjct: 95  -RFVD---RGERPFVLGPTHEEVITDLVRNELSSYKQLPLNFFQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFEKIMVKLST 429
           MR R F   DA+ F T ++   E    ++     I+   G E   V+  T
Sbjct: 150 MRSREFLMKDAYSFHTSQESLQETYDAMYAAYSKIFTRIGLEFRAVQADT 199


>gi|261245474|emb|CBG23264.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. D23580]
          Length = 572

 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 7/144 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E++ P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYTWLPTGLRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELL- 94

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +  D   +  R F L P +      +  + L SY++LP+   +  + +R+E      G+
Sbjct: 95  -RFVD---RGERPFVLGPTHEEVITDLVRNELSSYKQLPLNFFQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNEC 404
           MR R F   DA+ F T ++   E 
Sbjct: 150 MRSREFLMKDAYSFHTSQESLQET 173


>gi|194428300|ref|ZP_03060842.1| prolyl-tRNA synthetase [Escherichia coli B171]
 gi|194413675|gb|EDX29955.1| prolyl-tRNA synthetase [Escherichia coli B171]
          Length = 572

 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 7/144 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E++ P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELL- 94

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +  D   +  R F L P +      +  + L SY++LP+   +  + +R+E      G+
Sbjct: 95  -RFVD---RGERPFVLGPTHEEVITDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNEC 404
           MR R F   DA+ F T ++   E 
Sbjct: 150 MRSREFLMKDAYSFHTSQESLQET 173


>gi|323705637|ref|ZP_08117211.1| prolyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum LX-11]
 gi|323535114|gb|EGB24891.1| prolyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum LX-11]
          Length = 570

 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 66/134 (49%), Gaps = 7/134 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SGV  +   G ++ + +   +R ++ +   +E+    ++   L ++SG WD +   MF 
Sbjct: 36  ASGVYIYLPLGKRVLKKIEEIVREEMDRAGAQEVLMSAIIPAELLKESGRWDVFGPEMFK 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +K  +D     R F L P +      +  + +KSYR+LP+ + +  + YR+E      G+
Sbjct: 96  LKDRND-----REFCLGPTHEEVFTDLIRNDVKSYRQLPLTIYQIQTKYRDERRPRF-GV 149

Query: 381 MRVRGFTQDDAHVF 394
           MR R F   DA+ F
Sbjct: 150 MRSREFIMKDAYSF 163


>gi|322616066|gb|EFY12983.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 315996572]
 gi|322620849|gb|EFY17709.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-1]
 gi|322623800|gb|EFY20637.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-3]
 gi|322627248|gb|EFY24039.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-4]
 gi|322630555|gb|EFY27319.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 515920-1]
 gi|322638227|gb|EFY34928.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 515920-2]
 gi|322645504|gb|EFY42031.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. NC_MB110209-0054]
 gi|322648203|gb|EFY44670.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. OH_2009072675]
 gi|322657523|gb|EFY53795.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 19N]
 gi|322663843|gb|EFY60043.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 81038-01]
 gi|322666676|gb|EFY62854.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MD_MDA09249507]
 gi|322672166|gb|EFY68278.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 414877]
 gi|322676523|gb|EFY72594.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 366867]
 gi|322679385|gb|EFY75430.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 413180]
 gi|323193468|gb|EFZ78676.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 609458-1]
 gi|323197510|gb|EFZ82645.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 556150-1]
 gi|323201221|gb|EFZ86290.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 609460]
 gi|323209616|gb|EFZ94549.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 507440-20]
 gi|323212132|gb|EFZ96956.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 556152]
 gi|323216437|gb|EGA01163.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB101509-0077]
 gi|323223373|gb|EGA07708.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB102109-0047]
 gi|323225934|gb|EGA10154.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB110209-0055]
 gi|323228525|gb|EGA12654.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB111609-0052]
 gi|323236862|gb|EGA20938.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 2009083312]
 gi|323239638|gb|EGA23685.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 2009085258]
 gi|323242315|gb|EGA26344.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 315731156]
 gi|323249977|gb|EGA33873.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2009159199]
 gi|323252407|gb|EGA36258.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008282]
 gi|323255690|gb|EGA39443.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008283]
 gi|323262873|gb|EGA46423.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008284]
 gi|323265359|gb|EGA48855.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008285]
 gi|323271854|gb|EGA55272.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008287]
          Length = 572

 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 7/144 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E++ P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYTWLPTGLRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELL- 94

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +  D   +  R F L P +      +  + L SY++LP+   +  + +R+E      G+
Sbjct: 95  -RFVD---RGERPFVLGPTHEEVITDLVRNELSSYKQLPLNFFQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNEC 404
           MR R F   DA+ F T ++   E 
Sbjct: 150 MRSREFLMKDAYSFHTSQESLQET 173


>gi|296101364|ref|YP_003611510.1| prolyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
 gi|295055823|gb|ADF60561.1| prolyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
          Length = 572

 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 77/170 (45%), Gaps = 8/170 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E++ P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELL- 94

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +  D   +  R F L P +      +  + L SY++LP+   +  + +R+E      G+
Sbjct: 95  -RFVD---RGERPFVLGPTHEEVITDLIRNELSSYKQLPLNFFQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFEKIMVKLST 429
           MR R F   DA+ F T  +   E   K++     I+   G +   V+  T
Sbjct: 150 MRSREFLMKDAYSFHTSHESLQETYDKMYEAYSKIFSRMGLDFRAVQADT 199


>gi|168823087|ref|ZP_02835087.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Weltevreden str. HI_N05-537]
 gi|205340609|gb|EDZ27373.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Weltevreden str. HI_N05-537]
          Length = 572

 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 7/144 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E++ P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYTWLPTGLRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELL- 94

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +  D   +  R F L P +      +  + L SY++LP+   +  + +R+E      G+
Sbjct: 95  -RFVD---RGERPFVLGPTHEEVITDLVRNELSSYKQLPLNFFQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNEC 404
           MR R F   DA+ F T ++   E 
Sbjct: 150 MRSREFLMKDAYSFHTSQESLQET 173


>gi|20094665|ref|NP_614512.1| prolyl-tRNA synthetase [Methanopyrus kandleri AV19]
 gi|74580679|sp|Q8TW09|SYP_METKA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|19887826|gb|AAM02442.1| Prolyl-tRNA synthetase [Methanopyrus kandleri AV19]
          Length = 485

 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 82/390 (21%), Positives = 161/390 (41%), Gaps = 68/390 (17%)

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVL-DQH 303
           + ++ R  ++  +     G+  W   G++I Q ++  +RRK+++  +EE+  P ++ +  
Sbjct: 25  YAEVLRSAEIMDVRYPVKGMYVWLPYGFEIRQRVVEKLRRKLRETGHEEVLFPTLIPETQ 84

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDL-RTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
           L ++S H   +   ++ V      +K+L    AL+P +      +F   ++S+ +LP+++
Sbjct: 85  LKKESEHIAGFEDEVYWVTHGG--LKELDEKLALRPTSETAIYPMFALWIRSHADLPLKI 142

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFT-----QDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
            +  + +R E +     L+R+R  T               E+   E ++I++   S + +
Sbjct: 143 FQIVNTFRYE-TKHTRPLIRMREITTFKEAHTAHATEEEAEEQVKEAVEIYS---SFFDE 198

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
            G   I    S RPE        WD                             GA Y  
Sbjct: 199 LGIPYIA---SVRPE--------WDKF--------------------------PGAEYTV 221

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRF-NAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
            F+ ++ D  GR  Q GT+ +   L   F   F V   +E+     ++   +G  +R + 
Sbjct: 222 AFDTLMPD--GRTLQIGTVHM---LGQNFARTFEVTYETEEGDQEYVYMTCYGISDRVVA 276

Query: 537 IMIENFKGN-----LPLWLSPIQAIVTTITSSAV-----EYAQEIANLLKSHHLSIETDF 586
            MI    G+     LP  ++P Q ++  I    V     E A E+  +L+   + ++ D 
Sbjct: 277 SMI-AIHGDERGLVLPPDVAPYQVVMVPILKKGVRRKILERAAEVEEMLREEGVRVKVDD 335

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASE 616
           R+ +   K     +K +P+ I  G +E  E
Sbjct: 336 RDMSPGRKFHYWELKGVPLRIELGARELEE 365


>gi|16759234|ref|NP_454851.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. CT18]
 gi|16763631|ref|NP_459246.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|29140783|ref|NP_804125.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. Ty2]
 gi|56412515|ref|YP_149590.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. ATCC 9150]
 gi|161612617|ref|YP_001586582.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi B str. SPB7]
 gi|167990131|ref|ZP_02571231.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|168230553|ref|ZP_02655611.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Kentucky str. CDC 191]
 gi|168245012|ref|ZP_02669944.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL486]
 gi|168264654|ref|ZP_02686627.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Hadar str. RI_05P066]
 gi|168464192|ref|ZP_02698095.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. SL317]
 gi|194449602|ref|YP_002044232.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|194472823|ref|ZP_03078807.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Kentucky str. CVM29188]
 gi|197264294|ref|ZP_03164368.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA23]
 gi|197361450|ref|YP_002141086.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. AKU_12601]
 gi|198242516|ref|YP_002214203.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Dublin str. CT_02021853]
 gi|200386929|ref|ZP_03213541.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Virchow str. SL491]
 gi|205351579|ref|YP_002225380.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 287/91]
 gi|207855760|ref|YP_002242411.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. P125109]
 gi|213051828|ref|ZP_03344706.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E00-7866]
 gi|213428490|ref|ZP_03361240.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E02-1180]
 gi|213580835|ref|ZP_03362661.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E98-0664]
 gi|213865222|ref|ZP_03387341.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. M223]
 gi|81821351|sp|Q5PD80|SYP_SALPA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|81832731|sp|Q7CR62|SYP_SALTY RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|81849080|sp|Q8XEY9|SYP_SALTI RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|189083511|sp|A9N0U7|SYP_SALPB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226701327|sp|B5FJ42|SYP_SALDC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226701328|sp|B5R434|SYP_SALEP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226701329|sp|B5R5J8|SYP_SALG2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226701334|sp|B4TK70|SYP_SALHS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226701336|sp|B5BAQ2|SYP_SALPK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|25293215|pir||AF0532 prolyl-tRNA synthetase [imported] - Salmonella enterica subsp.
           enterica serovar Typhi (strain CT18)
 gi|16418747|gb|AAL19205.1| proline tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|16501525|emb|CAD08702.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi]
 gi|29136407|gb|AAO67974.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. Ty2]
 gi|56126772|gb|AAV76278.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. ATCC 9150]
 gi|161361981|gb|ABX65749.1| hypothetical protein SPAB_00308 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194407906|gb|ACF68125.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|194459187|gb|EDX48026.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Kentucky str. CVM29188]
 gi|195632930|gb|EDX51384.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. SL317]
 gi|197092926|emb|CAR58355.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. AKU_12601]
 gi|197242549|gb|EDY25169.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA23]
 gi|197937032|gb|ACH74365.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Dublin str. CT_02021853]
 gi|199604027|gb|EDZ02572.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Virchow str. SL491]
 gi|205271360|emb|CAR36153.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 287/91]
 gi|205331403|gb|EDZ18167.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|205335202|gb|EDZ21966.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Kentucky str. CDC 191]
 gi|205336220|gb|EDZ22984.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL486]
 gi|205346928|gb|EDZ33559.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Hadar str. RI_05P066]
 gi|206707563|emb|CAR31837.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. P125109]
 gi|267991932|gb|ACY86817.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. 14028S]
 gi|301156869|emb|CBW16345.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. SL1344]
 gi|312911213|dbj|BAJ35187.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. T000240]
 gi|321225175|gb|EFX50235.1| Prolyl-tRNA synthetase ; Bacterial type [Salmonella enterica subsp.
           enterica serovar Typhimurium str. TN061786]
 gi|323128562|gb|ADX15992.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. 4/74]
 gi|326621946|gb|EGE28291.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Dublin str. 3246]
 gi|326626606|gb|EGE32949.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 9]
 gi|332987194|gb|AEF06177.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. UK-1]
          Length = 572

 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 7/144 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E++ P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYTWLPTGLRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELL- 94

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +  D   +  R F L P +      +  + L SY++LP+   +  + +R+E      G+
Sbjct: 95  -RFVD---RGERPFVLGPTHEEVITDLVRNELSSYKQLPLNFFQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNEC 404
           MR R F   DA+ F T ++   E 
Sbjct: 150 MRSREFLMKDAYSFHTSQESLQET 173


>gi|218703449|ref|YP_002410968.1| prolyl-tRNA synthetase [Escherichia coli UMN026]
 gi|293403264|ref|ZP_06647361.1| prolyl-tRNA synthetase [Escherichia coli FVEC1412]
 gi|293408287|ref|ZP_06652127.1| prolyl-tRNA synthetase [Escherichia coli B354]
 gi|298378800|ref|ZP_06988684.1| prolyl-tRNA synthetase [Escherichia coli FVEC1302]
 gi|300900763|ref|ZP_07118909.1| prolyl-tRNA synthetase [Escherichia coli MS 198-1]
 gi|301025919|ref|ZP_07189405.1| prolyl-tRNA synthetase [Escherichia coli MS 69-1]
 gi|331661569|ref|ZP_08362493.1| proline--tRNA ligase [Escherichia coli TA143]
 gi|226701283|sp|B7N862|SYP_ECOLU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|218430546|emb|CAR11412.1| prolyl-tRNA synthetase [Escherichia coli UMN026]
 gi|284919970|emb|CBG33025.1| prolyl-tRNA synthetase [Escherichia coli 042]
 gi|291430179|gb|EFF03193.1| prolyl-tRNA synthetase [Escherichia coli FVEC1412]
 gi|291472538|gb|EFF15020.1| prolyl-tRNA synthetase [Escherichia coli B354]
 gi|298281134|gb|EFI22635.1| prolyl-tRNA synthetase [Escherichia coli FVEC1302]
 gi|300355748|gb|EFJ71618.1| prolyl-tRNA synthetase [Escherichia coli MS 198-1]
 gi|300395774|gb|EFJ79312.1| prolyl-tRNA synthetase [Escherichia coli MS 69-1]
 gi|331061484|gb|EGI33447.1| proline--tRNA ligase [Escherichia coli TA143]
 gi|332341528|gb|AEE54862.1| prolyl-tRNA synthetase ProS [Escherichia coli UMNK88]
          Length = 572

 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 7/144 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E++ P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELL- 94

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +  D   +  R F L P +      +  + L SY++LP+   +  + +R+E      G+
Sbjct: 95  -RFVD---RGERPFVLGPTHEEVITDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNEC 404
           MR R F   DA+ F T ++   E 
Sbjct: 150 MRSREFLMKDAYSFHTSQESLQET 173


>gi|254360942|ref|ZP_04977088.1| proline--tRNA ligase [Mannheimia haemolytica PHL213]
 gi|261492183|ref|ZP_05988753.1| proline--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
 gi|261494250|ref|ZP_05990749.1| proline--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|153092421|gb|EDN73484.1| proline--tRNA ligase [Mannheimia haemolytica PHL213]
 gi|261310102|gb|EEY11306.1| proline--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261312163|gb|EEY13296.1| proline--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
          Length = 571

 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 48/202 (23%), Positives = 90/202 (44%), Gaps = 10/202 (4%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-K 288
           +QYL+   +    D + ++ ++ L    I    SG+  W   G K+ + + + +R ++ K
Sbjct: 4   SQYLFSTLKEMPNDAQVVSHQLMLRAGMIRPMASGLYNWLPTGIKVLKKVENIIREEMNK 63

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
               E+  P V    LW +SG W+ Y   +   K   +     R F L P +      + 
Sbjct: 64  GGAIEVLMPVVQPAELWVESGRWNDYGPELLRFKDRGE-----RDFVLGPTHEEVITDLV 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI- 407
              + SY++LP+ L +  + +R+E      G+MR R F   DA+ F T ++   E   + 
Sbjct: 119 RREVSSYKQLPLNLYQIQTKFRDEVRPRF-GVMRSREFVMKDAYSFHTTQESLQETYDVM 177

Query: 408 HNLIISIYKDFGFEKIMVKLST 429
           + +  +I+   G +   V+  T
Sbjct: 178 YQVYSNIFTRLGLDFRAVQADT 199


>gi|82775586|ref|YP_401933.1| prolyl-tRNA synthetase [Shigella dysenteriae Sd197]
 gi|114152251|sp|Q32JR3|SYP_SHIDS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|81239734|gb|ABB60444.1| proline tRNA synthetase [Shigella dysenteriae Sd197]
          Length = 572

 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 7/144 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E++ P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELL- 94

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +  D   +  R F L P +      +  + L SY++LP+   +  + +R+E      G+
Sbjct: 95  -RFVD---RGERPFVLGPTHEEVITDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNEC 404
           MR R F   DA+ F T ++   E 
Sbjct: 150 MRSREFLMKDAYSFHTSQESLQET 173


>gi|16128187|ref|NP_414736.1| prolyl-tRNA synthetase [Escherichia coli str. K-12 substr. MG1655]
 gi|89107075|ref|AP_000855.1| prolyl-tRNA synthetase [Escherichia coli str. K-12 substr. W3110]
 gi|170079831|ref|YP_001729151.1| prolyl-tRNA synthetase [Escherichia coli str. K-12 substr. DH10B]
 gi|238899593|ref|YP_002925389.1| prolyl-tRNA synthetase [Escherichia coli BW2952]
 gi|34395980|sp|P16659|SYP_ECOLI RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Global RNA
           synthesis factor; AltName: Full=Proline--tRNA ligase;
           Short=ProRS
 gi|226701282|sp|B1XD64|SYP_ECODH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|259511593|sp|C4ZRT7|SYP_ECOBW RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|1552770|gb|AAB08622.1| proline-tRNA ligase [Escherichia coli]
 gi|1786392|gb|AAC73305.1| prolyl-tRNA synthetase [Escherichia coli str. K-12 substr. MG1655]
 gi|85674379|dbj|BAA77870.2| prolyl-tRNA synthetase [Escherichia coli str. K12 substr. W3110]
 gi|169887666|gb|ACB01373.1| prolyl-tRNA synthetase [Escherichia coli str. K-12 substr. DH10B]
 gi|238863283|gb|ACR65281.1| prolyl-tRNA synthetase [Escherichia coli BW2952]
 gi|260450602|gb|ACX41024.1| prolyl-tRNA synthetase [Escherichia coli DH1]
 gi|315134885|dbj|BAJ42044.1| prolyl-tRNA synthetase [Escherichia coli DH1]
          Length = 572

 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 7/144 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E++ P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELL- 94

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +  D   +  R F L P +      +  + L SY++LP+   +  + +R+E      G+
Sbjct: 95  -RFVD---RGERPFVLGPTHEEVITDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNEC 404
           MR R F   DA+ F T ++   E 
Sbjct: 150 MRSREFLMKDAYSFHTSQESLQET 173


>gi|15799876|ref|NP_285888.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 EDL933]
 gi|15829450|ref|NP_308223.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
 gi|168752178|ref|ZP_02777200.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4113]
 gi|168765280|ref|ZP_02790287.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4501]
 gi|168769963|ref|ZP_02794970.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4486]
 gi|168777697|ref|ZP_02802704.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4196]
 gi|168782925|ref|ZP_02807932.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4076]
 gi|168789305|ref|ZP_02814312.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC869]
 gi|168802460|ref|ZP_02827467.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC508]
 gi|195939891|ref|ZP_03085273.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4024]
 gi|208809448|ref|ZP_03251785.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4206]
 gi|208812619|ref|ZP_03253948.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4045]
 gi|208821168|ref|ZP_03261488.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4042]
 gi|209398549|ref|YP_002268803.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4115]
 gi|217324314|ref|ZP_03440398.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14588]
 gi|254791327|ref|YP_003076164.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
 gi|261226949|ref|ZP_05941230.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK2000]
 gi|261255353|ref|ZP_05947886.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK966]
 gi|291281017|ref|YP_003497835.1| Prolyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
 gi|81848971|sp|Q8X8W2|SYP_ECO57 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226731431|sp|B5Z0H4|SYP_ECO5E RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|12512925|gb|AAG54496.1|AE005195_5 proline tRNA synthetase [Escherichia coli O157:H7 str. EDL933]
 gi|13359652|dbj|BAB33619.1| proline tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
 gi|187767123|gb|EDU30967.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4196]
 gi|188013912|gb|EDU52034.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4113]
 gi|188999651|gb|EDU68637.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4076]
 gi|189361055|gb|EDU79474.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4486]
 gi|189364925|gb|EDU83341.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4501]
 gi|189371068|gb|EDU89484.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC869]
 gi|189375548|gb|EDU93964.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC508]
 gi|208729249|gb|EDZ78850.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4206]
 gi|208733896|gb|EDZ82583.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4045]
 gi|208741291|gb|EDZ88973.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4042]
 gi|209159949|gb|ACI37382.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4115]
 gi|209745624|gb|ACI71119.1| proline tRNA synthetase [Escherichia coli]
 gi|209745626|gb|ACI71120.1| proline tRNA synthetase [Escherichia coli]
 gi|209745628|gb|ACI71121.1| proline tRNA synthetase [Escherichia coli]
 gi|209745630|gb|ACI71122.1| proline tRNA synthetase [Escherichia coli]
 gi|209745632|gb|ACI71123.1| proline tRNA synthetase [Escherichia coli]
 gi|217320535|gb|EEC28959.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14588]
 gi|254590727|gb|ACT70088.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
 gi|290760890|gb|ADD54851.1| Prolyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
 gi|320190279|gb|EFW64929.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC1212]
 gi|320640001|gb|EFX09586.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. G5101]
 gi|320644771|gb|EFX13815.1| prolyl-tRNA synthetase [Escherichia coli O157:H- str. 493-89]
 gi|320652927|gb|EFX21165.1| prolyl-tRNA synthetase [Escherichia coli O157:H- str. H 2687]
 gi|320658315|gb|EFX26044.1| prolyl-tRNA synthetase [Escherichia coli O55:H7 str. 3256-97 TW
           07815]
 gi|320663625|gb|EFX30909.1| prolyl-tRNA synthetase [Escherichia coli O55:H7 str. USDA 5905]
 gi|320668938|gb|EFX35733.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. LSU-61]
 gi|326339750|gb|EGD63558.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. 1044]
 gi|326345084|gb|EGD68827.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. 1125]
          Length = 572

 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 7/144 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E++ P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELL- 94

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +  D   +  R F L P +      +  + L SY++LP+   +  + +R+E      G+
Sbjct: 95  -RFVD---RGERPFVLGPTHEEVITDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNEC 404
           MR R F   DA+ F T ++   E 
Sbjct: 150 MRSREFLMKDAYSFHTSQESLQET 173


>gi|325274563|ref|ZP_08140621.1| prolyl-tRNA synthetase [Pseudomonas sp. TJI-51]
 gi|324100290|gb|EGB98078.1| prolyl-tRNA synthetase [Pseudomonas sp. TJI-51]
          Length = 571

 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/194 (22%), Positives = 87/194 (44%), Gaps = 10/194 (5%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           +QYL   ++    D   ++ ++ L    I +  SG+  W   G ++ + + + +R ++  
Sbjct: 4   SQYLLATQKETPADAVVISHQLMLRAGMIRKLASGLYTWLPMGLRVMRKVEAVVREEMNA 63

Query: 290 DYE-EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
               E+  P +    LWQ+SG W+ Y   +  +K      +  R F + P +      + 
Sbjct: 64  AGALEVLMPSIQPAELWQESGRWEQYGPELLRLKD-----RHQRDFCVGPTHEEVITDLA 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KI 407
            + L SY++LP+ + +  + +R+E      GLMR R F   DA+ F   +    E   ++
Sbjct: 119 RNELSSYKQLPLNMYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSFHADQASLQETYDRM 177

Query: 408 HNLIISIYKDFGFE 421
           H    +I+   G +
Sbjct: 178 HQAYSNIFTRLGLD 191


>gi|194443070|ref|YP_002039482.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. SL254]
 gi|197250542|ref|YP_002145247.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Agona str. SL483]
 gi|226701326|sp|B5F8V6|SYP_SALA4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226701335|sp|B4SV24|SYP_SALNS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|194401733|gb|ACF61955.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. SL254]
 gi|197214245|gb|ACH51642.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Agona str. SL483]
          Length = 572

 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 7/144 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E++ P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYTWLPTGLRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELL- 94

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +  D   +  R F L P +      +  + L SY++LP+   +  + +R+E      G+
Sbjct: 95  -RFVD---RGERPFVLGPTHEEVITDLVRNELSSYKQLPLNFFQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNEC 404
           MR R F   DA+ F T ++   E 
Sbjct: 150 MRSREFLMKDAYSFHTSQESLQET 173


>gi|170288224|ref|YP_001738462.1| prolyl-tRNA synthetase [Thermotoga sp. RQ2]
 gi|226701351|sp|B1L8Y1|SYP_THESQ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|170175727|gb|ACB08779.1| prolyl-tRNA synthetase [Thermotoga sp. RQ2]
          Length = 577

 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 83/174 (47%), Gaps = 8/174 (4%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  +G+  +   G ++   + + +R ++ +   +EI  P +    LW+QSG WD Y  
Sbjct: 32  IRKTAAGIYTYLPLGRRVLLKIENIVREEMNRIGAQEILMPILQPAELWKQSGRWDDYGP 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  +K   +     R F L P +      +  + L+SYR+LP+ + +  + YR+E    
Sbjct: 92  EMMKLKDRHE-----RDFTLGPTHEEIVTDLVKNELRSYRQLPLVVYQVANKYRDEIRPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS-IYKDFGFEKIMVKLST 429
             GL+R R F   DA+ F +  +  +E  ++     S I +  G + ++++  T
Sbjct: 147 F-GLLRAREFIMKDAYSFHSSWESLDETYELFKEAYSRIMERLGVKYMVIEAET 199


>gi|191167053|ref|ZP_03028875.1| prolyl-tRNA synthetase [Escherichia coli B7A]
 gi|309796373|ref|ZP_07690782.1| prolyl-tRNA synthetase [Escherichia coli MS 145-7]
 gi|190902946|gb|EDV62673.1| prolyl-tRNA synthetase [Escherichia coli B7A]
 gi|308120077|gb|EFO57339.1| prolyl-tRNA synthetase [Escherichia coli MS 145-7]
          Length = 572

 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 7/144 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E++ P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELL- 94

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +  D   +  R F L P +      +  + L SY++LP+   +  + +R+E      G+
Sbjct: 95  -RFVD---RGERPFVLGPTHEEVITDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNEC 404
           MR R F   DA+ F T ++   E 
Sbjct: 150 MRSREFLMKDAYSFHTSQESLQET 173


>gi|30061751|ref|NP_835922.1| prolyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|56479623|ref|NP_706140.2| prolyl-tRNA synthetase [Shigella flexneri 2a str. 301]
 gi|74310815|ref|YP_309234.1| prolyl-tRNA synthetase [Shigella sonnei Ss046]
 gi|82542793|ref|YP_406740.1| prolyl-tRNA synthetase [Shigella boydii Sb227]
 gi|157159661|ref|YP_001456979.1| prolyl-tRNA synthetase [Escherichia coli HS]
 gi|162139361|ref|YP_687766.2| prolyl-tRNA synthetase [Shigella flexneri 5 str. 8401]
 gi|170021452|ref|YP_001726406.1| prolyl-tRNA synthetase [Escherichia coli ATCC 8739]
 gi|187730943|ref|YP_001878997.1| prolyl-tRNA synthetase [Shigella boydii CDC 3083-94]
 gi|188494186|ref|ZP_03001456.1| prolyl-tRNA synthetase [Escherichia coli 53638]
 gi|193063143|ref|ZP_03044234.1| prolyl-tRNA synthetase [Escherichia coli E22]
 gi|193067639|ref|ZP_03048606.1| prolyl-tRNA synthetase [Escherichia coli E110019]
 gi|194439920|ref|ZP_03071982.1| prolyl-tRNA synthetase [Escherichia coli 101-1]
 gi|209917387|ref|YP_002291471.1| prolyl-tRNA synthetase [Escherichia coli SE11]
 gi|218552775|ref|YP_002385688.1| prolyl-tRNA synthetase [Escherichia coli IAI1]
 gi|253774778|ref|YP_003037609.1| prolyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|254160314|ref|YP_003043422.1| prolyl-tRNA synthetase [Escherichia coli B str. REL606]
 gi|256025507|ref|ZP_05439372.1| prolyl-tRNA synthetase [Escherichia sp. 4_1_40B]
 gi|260842426|ref|YP_003220204.1| prolyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009]
 gi|260853405|ref|YP_003227296.1| prolyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368]
 gi|293418080|ref|ZP_06660702.1| prolyl-tRNA synthetase [Escherichia coli B185]
 gi|297519907|ref|ZP_06938293.1| prolyl-tRNA synthetase [Escherichia coli OP50]
 gi|300820114|ref|ZP_07100286.1| prolyl-tRNA synthetase [Escherichia coli MS 107-1]
 gi|300825388|ref|ZP_07105464.1| prolyl-tRNA synthetase [Escherichia coli MS 119-7]
 gi|300932153|ref|ZP_07147436.1| prolyl-tRNA synthetase [Escherichia coli MS 187-1]
 gi|300949771|ref|ZP_07163746.1| prolyl-tRNA synthetase [Escherichia coli MS 116-1]
 gi|300956080|ref|ZP_07168404.1| prolyl-tRNA synthetase [Escherichia coli MS 175-1]
 gi|301028690|ref|ZP_07191910.1| prolyl-tRNA synthetase [Escherichia coli MS 196-1]
 gi|301646520|ref|ZP_07246394.1| prolyl-tRNA synthetase [Escherichia coli MS 146-1]
 gi|307136795|ref|ZP_07496151.1| prolyl-tRNA synthetase [Escherichia coli H736]
 gi|307311357|ref|ZP_07590999.1| prolyl-tRNA synthetase [Escherichia coli W]
 gi|331640649|ref|ZP_08341797.1| proline--tRNA ligase [Escherichia coli H736]
 gi|331666440|ref|ZP_08367321.1| proline--tRNA ligase [Escherichia coli TA271]
 gi|331680776|ref|ZP_08381435.1| proline--tRNA ligase [Escherichia coli H591]
 gi|81839318|sp|Q83MC8|SYP_SHIFL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|114152250|sp|Q325U6|SYP_SHIBS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|114152252|sp|Q3Z5G3|SYP_SHISS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|148887036|sp|Q0T815|SYP_SHIF8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|166980120|sp|A7ZWE2|SYP_ECOHS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|189083498|sp|B1IQE6|SYP_ECOLC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226701281|sp|B7M1Z9|SYP_ECO8A RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226701284|sp|B6HZR3|SYP_ECOSE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226701339|sp|B2U338|SYP_SHIB3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|30039993|gb|AAP15727.1| proline tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|56383174|gb|AAN41847.2| proline tRNA synthetase [Shigella flexneri 2a str. 301]
 gi|73854292|gb|AAZ86999.1| proline tRNA synthetase [Shigella sonnei Ss046]
 gi|81244204|gb|ABB64912.1| proline tRNA synthetase [Shigella boydii Sb227]
 gi|157065341|gb|ABV04596.1| prolyl-tRNA synthetase [Escherichia coli HS]
 gi|169756380|gb|ACA79079.1| prolyl-tRNA synthetase [Escherichia coli ATCC 8739]
 gi|187427935|gb|ACD07209.1| prolyl-tRNA synthetase [Shigella boydii CDC 3083-94]
 gi|188489385|gb|EDU64488.1| prolyl-tRNA synthetase [Escherichia coli 53638]
 gi|192931051|gb|EDV83654.1| prolyl-tRNA synthetase [Escherichia coli E22]
 gi|192959051|gb|EDV89487.1| prolyl-tRNA synthetase [Escherichia coli E110019]
 gi|194421166|gb|EDX37191.1| prolyl-tRNA synthetase [Escherichia coli 101-1]
 gi|209910646|dbj|BAG75720.1| prolyl-tRNA synthase [Escherichia coli SE11]
 gi|218359543|emb|CAQ97083.1| prolyl-tRNA synthetase [Escherichia coli IAI1]
 gi|242376026|emb|CAQ30709.1| prolyl-tRNA synthetase [Escherichia coli BL21(DE3)]
 gi|253325822|gb|ACT30424.1| prolyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253972215|gb|ACT37886.1| prolyl-tRNA synthetase [Escherichia coli B str. REL606]
 gi|253976424|gb|ACT42094.1| prolyl-tRNA synthetase [Escherichia coli BL21(DE3)]
 gi|257752054|dbj|BAI23556.1| prolyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368]
 gi|257757573|dbj|BAI29070.1| prolyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009]
 gi|281599550|gb|ADA72534.1| putative prolyl-tRNA synthetase [Shigella flexneri 2002017]
 gi|291430798|gb|EFF03796.1| prolyl-tRNA synthetase [Escherichia coli B185]
 gi|299878289|gb|EFI86500.1| prolyl-tRNA synthetase [Escherichia coli MS 196-1]
 gi|300317074|gb|EFJ66858.1| prolyl-tRNA synthetase [Escherichia coli MS 175-1]
 gi|300450836|gb|EFK14456.1| prolyl-tRNA synthetase [Escherichia coli MS 116-1]
 gi|300460090|gb|EFK23583.1| prolyl-tRNA synthetase [Escherichia coli MS 187-1]
 gi|300522148|gb|EFK43217.1| prolyl-tRNA synthetase [Escherichia coli MS 119-7]
 gi|300527328|gb|EFK48390.1| prolyl-tRNA synthetase [Escherichia coli MS 107-1]
 gi|301075273|gb|EFK90079.1| prolyl-tRNA synthetase [Escherichia coli MS 146-1]
 gi|306908336|gb|EFN38834.1| prolyl-tRNA synthetase [Escherichia coli W]
 gi|315059413|gb|ADT73740.1| prolyl-tRNA synthetase [Escherichia coli W]
 gi|315616320|gb|EFU96938.1| prolyl-tRNA synthetase [Escherichia coli 3431]
 gi|320173324|gb|EFW48527.1| prolyl-tRNA synthetase [Shigella dysenteriae CDC 74-1112]
 gi|320186617|gb|EFW61342.1| prolyl-tRNA synthetase [Shigella flexneri CDC 796-83]
 gi|320200278|gb|EFW74864.1| prolyl-tRNA synthetase [Escherichia coli EC4100B]
 gi|323157966|gb|EFZ44068.1| prolyl-tRNA synthetase [Escherichia coli EPECa14]
 gi|323165899|gb|EFZ51681.1| prolyl-tRNA synthetase [Shigella sonnei 53G]
 gi|323170987|gb|EFZ56636.1| prolyl-tRNA synthetase [Escherichia coli LT-68]
 gi|323380028|gb|ADX52296.1| prolyl-tRNA synthetase [Escherichia coli KO11]
 gi|323939929|gb|EGB36127.1| prolyl-tRNA synthetase [Escherichia coli E482]
 gi|323945673|gb|EGB41722.1| prolyl-tRNA synthetase [Escherichia coli H120]
 gi|323959956|gb|EGB55603.1| prolyl-tRNA synthetase [Escherichia coli H489]
 gi|323970674|gb|EGB65930.1| prolyl-tRNA synthetase [Escherichia coli TA007]
 gi|324019415|gb|EGB88634.1| prolyl-tRNA synthetase [Escherichia coli MS 117-3]
 gi|324118316|gb|EGC12211.1| prolyl-tRNA synthetase [Escherichia coli E1167]
 gi|331040395|gb|EGI12602.1| proline--tRNA ligase [Escherichia coli H736]
 gi|331066651|gb|EGI38528.1| proline--tRNA ligase [Escherichia coli TA271]
 gi|331072239|gb|EGI43575.1| proline--tRNA ligase [Escherichia coli H591]
 gi|332762067|gb|EGJ92338.1| prolyl-tRNA synthetase [Shigella flexneri 2747-71]
 gi|332765044|gb|EGJ95272.1| prolyl-tRNA synthetase [Shigella flexneri K-671]
 gi|332768698|gb|EGJ98878.1| prolyl-tRNA synthetase [Shigella flexneri 2930-71]
 gi|333009265|gb|EGK28721.1| prolyl-tRNA synthetase [Shigella flexneri K-218]
 gi|333010690|gb|EGK30123.1| prolyl-tRNA synthetase [Shigella flexneri VA-6]
 gi|333011036|gb|EGK30455.1| prolyl-tRNA synthetase [Shigella flexneri K-272]
 gi|333021831|gb|EGK41080.1| prolyl-tRNA synthetase [Shigella flexneri K-227]
 gi|333022223|gb|EGK41462.1| prolyl-tRNA synthetase [Shigella flexneri K-304]
          Length = 572

 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 7/144 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E++ P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELL- 94

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +  D   +  R F L P +      +  + L SY++LP+   +  + +R+E      G+
Sbjct: 95  -RFVD---RGERPFVLGPTHEEVITDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNEC 404
           MR R F   DA+ F T ++   E 
Sbjct: 150 MRSREFLMKDAYSFHTSQESLQET 173


>gi|157156008|ref|YP_001461365.1| prolyl-tRNA synthetase [Escherichia coli E24377A]
 gi|166980119|sp|A7ZHT6|SYP_ECO24 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|157078038|gb|ABV17746.1| prolyl-tRNA synthetase [Escherichia coli E24377A]
          Length = 572

 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 7/144 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E++ P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELL- 94

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +  D   +  R F L P +      +  + L SY++LP+   +  + +R+E      G+
Sbjct: 95  -RFVD---RGERPFVLGPTHEEVITDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNEC 404
           MR R F   DA+ F T ++   E 
Sbjct: 150 MRSREFLMKDAYSFHTSQESLQET 173


>gi|218693660|ref|YP_002401327.1| prolyl-tRNA synthetase [Escherichia coli 55989]
 gi|256021628|ref|ZP_05435493.1| prolyl-tRNA synthetase [Shigella sp. D9]
 gi|293476853|ref|ZP_06665261.1| prolyl-tRNA synthetase [Escherichia coli B088]
 gi|300921804|ref|ZP_07137964.1| prolyl-tRNA synthetase [Escherichia coli MS 182-1]
 gi|301325160|ref|ZP_07218690.1| prolyl-tRNA synthetase [Escherichia coli MS 78-1]
 gi|254782900|sp|B7LHA4|SYP_ECO55 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|218350392|emb|CAU96077.1| prolyl-tRNA synthetase [Escherichia coli 55989]
 gi|291321306|gb|EFE60748.1| prolyl-tRNA synthetase [Escherichia coli B088]
 gi|300421799|gb|EFK05110.1| prolyl-tRNA synthetase [Escherichia coli MS 182-1]
 gi|300847966|gb|EFK75726.1| prolyl-tRNA synthetase [Escherichia coli MS 78-1]
 gi|323935035|gb|EGB31408.1| prolyl-tRNA synthetase [Escherichia coli E1520]
          Length = 572

 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 7/144 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E++ P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELL- 94

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +  D   +  R F L P +      +  + L SY++LP+   +  + +R+E      G+
Sbjct: 95  -RFVD---RGERPFVLGPTHEEVITDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNEC 404
           MR R F   DA+ F T ++   E 
Sbjct: 150 MRSREFLMKDAYSFHTSQESLQET 173


>gi|212710377|ref|ZP_03318505.1| hypothetical protein PROVALCAL_01437 [Providencia alcalifaciens DSM
           30120]
 gi|212686959|gb|EEB46487.1| hypothetical protein PROVALCAL_01437 [Providencia alcalifaciens DSM
           30120]
          Length = 572

 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 40/162 (24%), Positives = 77/162 (47%), Gaps = 8/162 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++++    E++ P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYDWLPTGVRVLRKVENIVREEMENAGAIEVSLPVVQPADLWQESGRWEQYGPELL- 94

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +  D   +  R F L P +      +  + + SY++LP+ L +  + +R+E      G+
Sbjct: 95  -RFVD---RGERPFVLGPTHEEVITDLVRNEITSYKQLPLNLFQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFE 421
           MR R F   DA+ F T ++   E    ++     I+   GF+
Sbjct: 150 MRSREFIMKDAYSFHTSQESLQETYDAMYEAYSKIFTRIGFD 191


>gi|190891305|ref|YP_001977847.1| prolyl-tRNA synthetase [Rhizobium etli CIAT 652]
 gi|226701323|sp|B3PW17|SYP_RHIE6 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|190696584|gb|ACE90669.1| prolyl-tRNA synthetase protein [Rhizobium etli CIAT 652]
          Length = 440

 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 83/195 (42%), Gaps = 11/195 (5%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTP 297
           +E+E   HR + R      I +   G+  W   G ++   + + +R  + +    E++ P
Sbjct: 16  KEAEIVSHRLMLRAG---MIRQQSQGIYSWLPLGKRVLDKVNAIIREEQNRAGAIELSMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LWQ+SG +D+Y   M  +K      +  R     P N      +F   +KSY++
Sbjct: 73  TLQSAELWQESGRYDAYGKEMLRIKD-----RQERPMLYGPTNEEMVTDIFRSSVKSYKD 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYK 416
           LP+ L      +R+E      G MR R F   DA+ F  T+E   +   K+    +  + 
Sbjct: 128 LPLNLYHIQLKFRDEIRPRF-GTMRSREFMMKDAYSFDLTREGAEHSYNKMFAAYLRTFD 186

Query: 417 DFGFEKIMVKLSTRP 431
             G   I ++  T P
Sbjct: 187 RLGLRAIPMRADTGP 201


>gi|168235024|ref|ZP_02660082.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|194735941|ref|YP_002113265.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|204926680|ref|ZP_03217882.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Javiana str. GA_MM04042433]
 gi|226701337|sp|B4TYF5|SYP_SALSV RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|194711443|gb|ACF90664.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|197291887|gb|EDY31237.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|204323345|gb|EDZ08540.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Javiana str. GA_MM04042433]
          Length = 572

 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 7/144 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E++ P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYTWLPTGLRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELL- 94

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +  D   +  R F L P +      +  + L SY++LP+   +  + +R+E      G+
Sbjct: 95  -RFVD---RGERPFVLGPTHEEVITDLVRNELSSYKQLPLNFFQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNEC 404
           MR R F   DA+ F T ++   E 
Sbjct: 150 MRSREFLMKDAYSFHTSQESLQET 173


>gi|165977268|ref|YP_001652861.1| prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
 gi|226731422|sp|B0BT03|SYP_ACTPJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|165877369|gb|ABY70417.1| prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
          Length = 571

 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 91/202 (45%), Gaps = 10/202 (4%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-K 288
           +QYL+   +    D + ++ ++ L    I    SG+  W   G K+ + + + +R ++ K
Sbjct: 4   SQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMASGLYNWLPTGIKVLKKVENIIREEMNK 63

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
               E+  P V    LWQ+SG W+ Y A +   +  D   +  R F L P +      + 
Sbjct: 64  GGAIEVLMPVVQPAELWQESGRWNDYGAELL--RFVD---RGSRDFVLGPTHEEVITDLV 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI- 407
              + SY++LP+ L +  + +R+E      G+MR R F   DA+ F   +    E   + 
Sbjct: 119 RREVSSYKQLPLNLYQTQTKFRDEVRPRF-GVMRSREFVMKDAYSFHVDKASLQETYDVM 177

Query: 408 HNLIISIYKDFGFEKIMVKLST 429
           + +  +I+   G +   V+  T
Sbjct: 178 YQVYSNIFTRLGLDFRAVQADT 199


>gi|224582089|ref|YP_002635887.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi C strain RKS4594]
 gi|254782914|sp|C0Q6L7|SYP_SALPC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|224466616|gb|ACN44446.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi C strain RKS4594]
          Length = 572

 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 7/144 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E++ P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYTWLPTGLRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELL- 94

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +  D   +  R F L P +      +  + L SY++LP+   +  + +R+E      G+
Sbjct: 95  -RFVD---RGERPFVLGPTHEEVITDLVRNELSSYKQLPLNFFQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNEC 404
           MR R F   DA+ F T ++   E 
Sbjct: 150 MRSREFLMKDAYSFHTSQESLQET 173


>gi|167553343|ref|ZP_02347092.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA29]
 gi|238911308|ref|ZP_04655145.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Tennessee str. CDC07-0191]
 gi|205322190|gb|EDZ10029.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA29]
          Length = 572

 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 7/144 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E++ P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYTWLPTGLRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELL- 94

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +  D   +  R F L P +      +  + L SY++LP+   +  + +R+E      G+
Sbjct: 95  -RFVD---RGERPFVLGPTHEEVITDLVRNELSSYKQLPLNFFQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNEC 404
           MR R F   DA+ F T ++   E 
Sbjct: 150 MRSREFLMKDAYSFHTSQESLQET 173


>gi|323176512|gb|EFZ62104.1| prolyl-tRNA synthetase [Escherichia coli 1180]
          Length = 547

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 7/144 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E++ P V    LWQ+SG W+ Y   +  
Sbjct: 11  ASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELL- 69

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +  D   +  R F L P +      +  + L SY++LP+   +  + +R+E      G+
Sbjct: 70  -RFVD---RGERPFVLGPTHEEVITDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRF-GV 124

Query: 381 MRVRGFTQDDAHVFCTKEQMFNEC 404
           MR R F   DA+ F T ++   E 
Sbjct: 125 MRSREFLMKDAYSFHTSQESLQET 148


>gi|322657154|gb|EFY53437.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. CASC_09SCPH15965]
 gi|322686289|gb|EFY82273.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 446600]
          Length = 277

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 69/144 (47%), Gaps = 7/144 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E++ P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYTWLPTGLRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGRWEQYGPEL-- 93

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           ++  D   +  R F L P +      +  + L SY++LP+   +  + +R+E      G+
Sbjct: 94  LRFVD---RGERPFVLGPTHEEVITDLVRNELSSYKQLPLNFFQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNEC 404
           MR R F   DA+ F T ++   E 
Sbjct: 150 MRSREFLMKDAYSFHTSQESLQET 173


>gi|162139614|ref|YP_215228.2| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|114152248|sp|Q57T14|SYP_SALCH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|322713265|gb|EFZ04836.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. A50]
          Length = 572

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 7/144 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E++ P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYTWLPTGLRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELL- 94

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +  D   +  R F L P +      +  + L SY++LP+   +  + +R+E      G+
Sbjct: 95  -RFVD---RGERPFVLGPTHEEVITDLVRNELSSYKQLPLNFFQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNEC 404
           MR R F   DA+ F T ++   E 
Sbjct: 150 MRSREFLMKDAYSFHTSQESLQET 173


>gi|68249330|ref|YP_248442.1| prolyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
 gi|229844600|ref|ZP_04464739.1| prolyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
 gi|81336245|sp|Q4QMG5|SYP_HAEI8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|68057529|gb|AAX87782.1| prolyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
 gi|229812314|gb|EEP48004.1| prolyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
          Length = 572

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 46/202 (22%), Positives = 90/202 (44%), Gaps = 10/202 (4%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-K 288
           +QYL+   +    D + ++ ++ L    I    SG+  W   G ++ + +   +R ++ K
Sbjct: 4   SQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMASGLYNWLPTGIRVLKKVEKVVREEMNK 63

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
               E+  P V    LW++SG WD Y   +   +   +     R F L P +      + 
Sbjct: 64  GGAIEVLMPVVQPAELWEESGRWDQYGPELLRFEDRGN-----RNFVLGPTHEEVITDLV 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI- 407
              + SY++LP+ L +  + +R+E      G+MR R F   DA+ F T ++       + 
Sbjct: 119 RREVSSYKQLPLNLYQIQTKFRDEVRPRF-GVMRSREFIMKDAYSFHTTQESLQATYDVM 177

Query: 408 HNLIISIYKDFGFEKIMVKLST 429
           + +  +I++  G +   V+  T
Sbjct: 178 YQVYSNIFRRLGLDFRAVQADT 199


>gi|289578756|ref|YP_003477383.1| phosphoribulokinase/uridine kinase [Thermoanaerobacter italicus
           Ab9]
 gi|289528469|gb|ADD02821.1| phosphoribulokinase/uridine kinase [Thermoanaerobacter italicus
           Ab9]
          Length = 547

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 47/188 (25%), Positives = 86/188 (45%), Gaps = 3/188 (1%)

Query: 11  DGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRS 69
           +G+I  +P      D+A+          VA  ++ ++ DL+  V ++ ++E +       
Sbjct: 6   EGNIYEYPEGTKLEDIAKDFEHVYNGIIVAAKVDNELKDLNCTVSKDSTVEFVDTTIEEG 65

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
             + R S   +  +AV+ + P   V I   +  G Y +       ++  ++ I+K+M+EI
Sbjct: 66  TRIYRRSLTFVFIKAVKELLPGATVTIEHSLGKGLYCEIHGYS-LNNKIVSMIKKRMEEI 124

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
           I +D    ++ L  E+A +LFE +    KV + +    KE V +Y      D    P V 
Sbjct: 125 IEKDFKIERKMLPKEEAIKLFEKEGLTEKVRLFKDT-NKEKVPVYYCDGTVDFFYSPCVP 183

Query: 190 STGQVKKF 197
           STG +K F
Sbjct: 184 STGYLKVF 191


>gi|192359534|ref|YP_001982928.1| prolyl-tRNA synthetase [Cellvibrio japonicus Ueda107]
 gi|190685699|gb|ACE83377.1| prolyl-tRNA synthetase [Cellvibrio japonicus Ueda107]
          Length = 611

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 41/161 (25%), Positives = 71/161 (44%), Gaps = 8/161 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ K    E+  P V    LW++SG W  Y   +  
Sbjct: 72  ASGLYNWLPLGLRVLRKVETIVREEMNKSGAMEVLMPVVQPAELWEESGRWQQYGPELLR 131

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +    D     R F L P +      +  + LKSY++LP    +  + +R+E      G+
Sbjct: 132 ITDRHD-----RPFCLGPTHEEVITDLIRNELKSYKQLPANFYQIQTKFRDEIRPRF-GV 185

Query: 381 MRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGF 420
           MR R F   DA+ F  T+E +      +H    +I+   G 
Sbjct: 186 MRSREFIMKDAYSFHLTQESLQQTYDVMHTTYCNIFSRLGL 226


>gi|260175185|ref|ZP_05761597.1| uridine kinase (uridine monophosphokinase) [Bacteroides sp. D2]
 gi|315923417|ref|ZP_07919657.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313697292|gb|EFS34127.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 557

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 40/184 (21%), Positives = 85/184 (46%), Gaps = 2/184 (1%)

Query: 15  KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVI 73
           K FP+ ++  D+    + +   + V+  +N +   L+  V     +E +   D   +   
Sbjct: 16  KEFPIGSSLLDIYYGFNLNFPYQVVSAKVNNRSEGLNFRVYNNKDVEFLDVRDQSGMRTY 75

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
             S   ++ +AV  ++PE ++ +   +  G++ +    +P   +++ +I+++MQEIIA +
Sbjct: 76  VRSLCFVLFKAVTELFPEGKLFVEHPVSKGYFCNLRIGRPIELEDVTRIKQRMQEIIAEN 135

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQ 193
            P+ +      +A  +F  +    KV +LE+         Y  G+  D   G  + STG 
Sbjct: 136 IPYHRIECHTAEAVRVFSERGMNDKVRLLET-SGSLYTYYYTLGDTIDYYYGNLLPSTGY 194

Query: 194 VKKF 197
           +K F
Sbjct: 195 LKLF 198


>gi|223041831|ref|ZP_03612021.1| prolyl-tRNA synthetase [Actinobacillus minor 202]
 gi|223017400|gb|EEF15821.1| prolyl-tRNA synthetase [Actinobacillus minor 202]
          Length = 317

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 48/202 (23%), Positives = 89/202 (44%), Gaps = 10/202 (4%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-K 288
           +QYL+   +    D + ++ ++ L    I    SG+  W   G K+ + + + +R ++ K
Sbjct: 4   SQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMASGLYNWLPTGIKVLKKVENIIREEMNK 63

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
               E+  P V    LWQ+SG W+ Y A +       +     R F L P +      + 
Sbjct: 64  GGAIEVLMPVVQPAELWQESGRWNDYGAELLRFNDRGN-----RDFVLGPTHEEVITDLV 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI- 407
              + SY++LP+ L +  + +R+E      G+MR R F   DA+ F   +    E   + 
Sbjct: 119 RREVSSYKQLPLNLYQIQTKFRDEVRPRF-GVMRSREFIMKDAYSFHVDKASLQETYDVM 177

Query: 408 HNLIISIYKDFGFEKIMVKLST 429
           + +  +I+   G +   V+  T
Sbjct: 178 YQVYSNIFTRLGLDFRAVQADT 199


>gi|222475082|ref|YP_002563497.1| prolyl-tRNA synthetase (proS) [Anaplasma marginale str. Florida]
 gi|254994925|ref|ZP_05277115.1| prolyl-tRNA synthetase [Anaplasma marginale str. Mississippi]
 gi|255003060|ref|ZP_05278024.1| prolyl-tRNA synthetase [Anaplasma marginale str. Puerto Rico]
 gi|222419218|gb|ACM49241.1| prolyl-tRNA synthetase (proS) [Anaplasma marginale str. Florida]
          Length = 425

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 65/138 (47%), Gaps = 7/138 (5%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHLWQQSGHWDSYRA 316
           + ++ SG+  W   G K+ +T+   +R ++    + EI  P V    LW++S  +DSY  
Sbjct: 32  VRQNASGLYTWLPLGLKVLRTIEHIVREEMDSSGFLEILMPSVQPADLWRESLRYDSYGP 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  ++      +  R     P +      V    LKSYR+LP+ L +    +R+E    
Sbjct: 92  EMLRMQD-----RSGREMVFGPTHEEAISDVVRSSLKSYRDLPINLYQIQWKFRDELR-P 145

Query: 377 LHGLMRVRGFTQDDAHVF 394
            HG+MR R F   DA+ F
Sbjct: 146 RHGIMRGREFLMKDAYSF 163


>gi|119476901|ref|ZP_01617182.1| prolyl-tRNA synthetase [marine gamma proteobacterium HTCC2143]
 gi|119449708|gb|EAW30945.1| prolyl-tRNA synthetase [marine gamma proteobacterium HTCC2143]
          Length = 576

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 38/160 (23%), Positives = 74/160 (46%), Gaps = 8/160 (5%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG+  W   G ++ + + + +R ++ K   +E+  P V   +LWQ+SG W  Y   +  +
Sbjct: 37  SGLYSWLPMGLRVLRKVEAIVREEMNKAGAQELLMPVVQPSNLWQESGRWQQYGPELLRI 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
                T +   +F L P +      +  + +KSY++LP+   +  + +R+E      G+M
Sbjct: 97  -----TDRHNNSFCLGPTHEEVITDLIRNEIKSYKQLPLNFYQIQTKFRDEIRPRF-GVM 150

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLKI-HNLIISIYKDFGF 420
           R R F   DA+ F   ++   +  ++ H     I+   G 
Sbjct: 151 RSREFIMKDAYSFHNDQESLQQTYELMHAAYTKIFTRLGL 190


>gi|312970296|ref|ZP_07784478.1| prolyl-tRNA synthetase [Escherichia coli 1827-70]
 gi|110613794|gb|ABF02461.1| proline tRNA synthetase [Shigella flexneri 5 str. 8401]
 gi|310337794|gb|EFQ02905.1| prolyl-tRNA synthetase [Escherichia coli 1827-70]
 gi|313646744|gb|EFS11203.1| prolyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|323160236|gb|EFZ46194.1| prolyl-tRNA synthetase [Escherichia coli E128010]
 gi|332098769|gb|EGJ03729.1| prolyl-tRNA synthetase [Shigella boydii 3594-74]
 gi|332762199|gb|EGJ92468.1| prolyl-tRNA synthetase [Shigella flexneri 4343-70]
          Length = 547

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 7/144 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E++ P V    LWQ+SG W+ Y   +  
Sbjct: 11  ASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELL- 69

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +  D   +  R F L P +      +  + L SY++LP+   +  + +R+E      G+
Sbjct: 70  -RFVD---RGERPFVLGPTHEEVITDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRF-GV 124

Query: 381 MRVRGFTQDDAHVFCTKEQMFNEC 404
           MR R F   DA+ F T ++   E 
Sbjct: 125 MRSREFLMKDAYSFHTSQESLQET 148


>gi|313829616|gb|EFS67330.1| prolyl-tRNA synthetase [Propionibacterium acnes HL063PA2]
          Length = 581

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 48/198 (24%), Positives = 93/198 (46%), Gaps = 19/198 (9%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   HR L R   +  +A    GV  W   G ++ + + +  R ++     +E++ P 
Sbjct: 15  DAEVPSHRWLVRAGYIRRVA---PGVYSWLPLGLRVMRRIEAICREEMASIGAQEVSFPA 71

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L    ++++G W  Y  N+F        +KD +   +  +  P H  +F   +K    S
Sbjct: 72  LLASDPYKETGRWVEYGDNLF-------RLKDRKGVDM--LLGPTHEEMFTLMVKDLYSS 122

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH-NLIIS 413
           Y++LP+ L +  + YR+E +    G++R R F   DA+ F   ++  +E  +   +  I 
Sbjct: 123 YKDLPLCLYQIQNKYRDE-ARPRAGILRGREFVMMDAYSFDVAQEGLDEAYQAQRDAYIR 181

Query: 414 IYKDFGFEKIMVKLSTRP 431
           I+   GF+  +VK  + P
Sbjct: 182 IFNRLGFDYAIVKAMSGP 199


>gi|189485415|ref|YP_001956356.1| prolyl-tRNA synthetase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
 gi|226701354|sp|B1H063|SYP_UNCTG RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|170287374|dbj|BAG13895.1| prolyl-tRNA synthetase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
          Length = 569

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 63/128 (49%), Gaps = 7/128 (5%)

Query: 272 GWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G K+ + + + +R+++     +E+  P V  + LW ++  W++Y   +F +K   D    
Sbjct: 46  GLKVLRKVENIIRQEMNSAGGQEVIFPLVFPKALWLETDRWNAYGKELFKLKDRKDA--- 102

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
              F L P        +    +KSY++LPV L +FG+ +R+E      G+MR R F   D
Sbjct: 103 --EFCLAPTAEEVVTDLIRKDIKSYKQLPVMLYQFGTKFRDEIRPRF-GVMRSREFLMKD 159

Query: 391 AHVFCTKE 398
           A+ F   E
Sbjct: 160 AYSFHADE 167


>gi|113869200|ref|YP_727689.1| prolyl-tRNA synthetase [Ralstonia eutropha H16]
 gi|123133602|sp|Q0K6Q0|SYP_RALEH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|113527976|emb|CAJ94321.1| Prolyl-tRNA synthetase [Ralstonia eutropha H16]
          Length = 573

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/162 (22%), Positives = 79/162 (48%), Gaps = 8/162 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           G+G+  +   G ++ + + + +R ++ +    E++ P +    LWQ++G WD     +  
Sbjct: 36  GAGIYNYMPIGLRVIRKVENIVREEMNRAGAVELSMPVIQPAELWQETGRWDKMGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +K      +  R FA++P +      +    ++SY++LPV   +  + +R+E      G+
Sbjct: 96  LKD-----RHERDFAVQPTSEEVVTDIARSEIRSYKQLPVNFYQIQTKFRDERRPRF-GI 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDFGFE 421
           MR R FT  DA+ F        +  + +++  + I++ FG E
Sbjct: 150 MRGREFTMKDAYSFDRDTDGLRKSYENMYDAYVRIFRRFGLE 191


>gi|289426352|ref|ZP_06428095.1| proline--tRNA ligase [Propionibacterium acnes SK187]
 gi|289153080|gb|EFD01798.1| proline--tRNA ligase [Propionibacterium acnes SK187]
          Length = 585

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 48/198 (24%), Positives = 93/198 (46%), Gaps = 19/198 (9%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   HR L R   +  +A    GV  W   G ++ + + +  R ++     +E++ P 
Sbjct: 19  DAEVPSHRWLVRAGYIRRVA---PGVYSWLPLGLRVMRRIEAICREEMASIGAQEVSFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L    ++++G W  Y  N+F        +KD +   +  +  P H  +F   +K    S
Sbjct: 76  LLASDPYKETGRWVEYGDNLF-------RLKDRKGVDM--LLGPTHEEMFTLMVKDLYSS 126

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH-NLIIS 413
           Y++LP+ L +  + YR+E +    G++R R F   DA+ F   ++  +E  +   +  I 
Sbjct: 127 YKDLPLCLYQIQNKYRDE-ARPRAGILRGREFVMMDAYSFDVAQEGLDEAYQAQRDAYIR 185

Query: 414 IYKDFGFEKIMVKLSTRP 431
           I+   GF+  +VK  + P
Sbjct: 186 IFNRLGFDYAIVKAMSGP 203


>gi|212639527|ref|YP_002316047.1| prolyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
 gi|212561007|gb|ACJ34062.1| Prolyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
          Length = 568

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 86/183 (46%), Gaps = 11/183 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E + H+ L R      I ++ SGV  +   G ++ Q + + +R ++ +    E+  P 
Sbjct: 21  DAEIKSHQLLLRAG---FIRQNASGVYSFLPLGKRVLQKIEAIIREEMERAGAVELLMPA 77

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY   +  +K   +     R FAL   +     A+    +KSY+ L
Sbjct: 78  LQQAELWQESGRWYSYGPELMRLKDRHE-----RDFALGATHEEVITALVRDEVKSYKRL 132

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKD 417
           P+ L +  + +R+E      GL+R R F   DA+ F    +  +E   K++    ++++ 
Sbjct: 133 PLTLYQIQTKFRDEKRPRF-GLLRGREFIMKDAYSFHASHESLDEVYNKMYEAYANVFRR 191

Query: 418 FGF 420
            G 
Sbjct: 192 CGL 194


>gi|170016989|ref|YP_001727908.1| prolyl-tRNA synthetase [Leuconostoc citreum KM20]
 gi|226701307|sp|B1MY62|SYP_LEUCK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|169803846|gb|ACA82464.1| Prolyl-tRNA synthetase [Leuconostoc citreum KM20]
          Length = 571

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 55/117 (47%), Gaps = 6/117 (5%)

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
           D  E+  P++L   LWQ+SG + +Y  N++  K   D     R F L P +      +  
Sbjct: 65  DANEMLVPEILPAELWQKSGRYTTYGPNLYKFKNRQD-----RDFILGPTHEETFTQLMA 119

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
             +KSY++LP+ + +    +R+E      GL+R R F   DA+ F   +   +   +
Sbjct: 120 DDIKSYKKLPLVVYQIQPKFRDENRPRF-GLLRTREFIMKDAYSFSADQAGLDTAFR 175


>gi|62126444|gb|AAX64147.1| proline tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
          Length = 547

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 7/144 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E++ P V    LWQ+SG W+ Y   +  
Sbjct: 11  ASGLYTWLPTGLRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELL- 69

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +  D   +  R F L P +      +  + L SY++LP+   +  + +R+E      G+
Sbjct: 70  -RFVD---RGERPFVLGPTHEEVITDLVRNELSSYKQLPLNFFQIQTKFRDEVRPRF-GV 124

Query: 381 MRVRGFTQDDAHVFCTKEQMFNEC 404
           MR R F   DA+ F T ++   E 
Sbjct: 125 MRSREFLMKDAYSFHTSQESLQET 148


>gi|309787126|ref|ZP_07681738.1| prolyl-tRNA synthetase [Shigella dysenteriae 1617]
 gi|308924704|gb|EFP70199.1| prolyl-tRNA synthetase [Shigella dysenteriae 1617]
          Length = 547

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 7/144 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E++ P V    LWQ+SG W+ Y   +  
Sbjct: 11  ASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELL- 69

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +  D   +  R F L P +      +  + L SY++LP+   +  + +R+E      G+
Sbjct: 70  -RFVD---RGERPFVLGPTHEEVITDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRF-GV 124

Query: 381 MRVRGFTQDDAHVFCTKEQMFNEC 404
           MR R F   DA+ F T ++   E 
Sbjct: 125 MRSREFLMKDAYSFHTSQESLQET 148


>gi|288553027|ref|YP_003424962.1| prolyl-tRNA synthetase [Bacillus pseudofirmus OF4]
 gi|288544187|gb|ADC48070.1| prolyl-tRNA synthetase [Bacillus pseudofirmus OF4]
          Length = 572

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 54/115 (46%), Gaps = 6/115 (5%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           +E+  P +    LWQ++G WD     +  +K   D     R FAL P +     ++    
Sbjct: 67  QELTMPTMHPAELWQETGRWDKMGGELMRLKDRHD-----RDFALGPTHEEVITSILRDS 121

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           + SY++LPV L +  + +R+E      GL+R R F   DA+ F    +  +E  K
Sbjct: 122 ISSYKKLPVNLYQIQTKFRDERRPRF-GLLRGREFMMKDAYSFHATPESLDEAYK 175


>gi|262037473|ref|ZP_06010933.1| proline--tRNA ligase [Leptotrichia goodfellowii F0264]
 gi|261748508|gb|EEY35887.1| proline--tRNA ligase [Leptotrichia goodfellowii F0264]
          Length = 576

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 72/141 (51%), Gaps = 7/141 (4%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK 322
           GV  +   G+K+ + + + +R ++ + + +EI+ P +    LW++SG W +Y   +  +K
Sbjct: 44  GVYSYLPLGYKVLRKIENIVREEMNRANAQEIHMPVLQPASLWEESGRWFAYGPELMRLK 103

Query: 323 CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMR 382
             ++     R FAL P +      +  + + SY++LP  L +  + +R+E      GLMR
Sbjct: 104 DRNE-----REFALGPTHEEVVTDIVRNMVSSYKDLPFNLYQIQTKFRDEMRPRF-GLMR 157

Query: 383 VRGFTQDDAHVFCTKEQMFNE 403
            R F   DA+ F   ++  +E
Sbjct: 158 GREFLMKDAYSFHIDQKSLDE 178


>gi|227821637|ref|YP_002825607.1| prolyl-tRNA synthetase [Sinorhizobium fredii NGR234]
 gi|227340636|gb|ACP24854.1| prolyl-tRNA synthetase [Sinorhizobium fredii NGR234]
          Length = 501

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 49/195 (25%), Positives = 81/195 (41%), Gaps = 11/195 (5%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTP 297
           +E+E   HR + R      I +  +G+  W   G ++   + + +R  + +    E+  P
Sbjct: 75  KEAEIVSHRLMLRTG---MIRQQSAGIYSWLPLGKRVLDKVNAIIREEQNRSGAVELLMP 131

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LWQ+SG +D+Y   M  +K   D     R     P N      +F   +KSYR 
Sbjct: 132 TLQSAELWQESGRYDAYGKEMLRIKDRQD-----RPMLYGPTNEEMITDIFRSSVKSYRN 186

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYK 416
           LP+ L      +R+E      G MR R F   DA+ F   +E   +   K+    +  + 
Sbjct: 187 LPLNLYHIQLKFRDEIRPRF-GTMRSREFLMKDAYSFDLDREGAEHAYNKMFAAYLRTFD 245

Query: 417 DFGFEKIMVKLSTRP 431
             G   I ++  T P
Sbjct: 246 RMGLRAIPMRADTGP 260


>gi|19746872|ref|NP_608008.1| prolyl-tRNA synthetase [Streptococcus pyogenes MGAS8232]
 gi|81847886|sp|Q8NZB4|SYP_STRP8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|19749114|gb|AAL98507.1| putative prolyl-tRNA synthetase [Streptococcus pyogenes MGAS8232]
          Length = 618

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 55/102 (53%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  +++ +K  D++      F L P +      +  + +
Sbjct: 68  EMLAPALLTADLWRESGRYETYGEDLYKLKNRDNS-----DFILGPTHEETFTTLVRNAV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +  S YR+E     +GL+R R F   D + F
Sbjct: 123 KSYKQLPLNLYQIQSKYRDEKR-PRNGLLRTREFIMKDGYSF 163


>gi|21911224|ref|NP_665492.1| prolyl-tRNA synthetase [Streptococcus pyogenes MGAS315]
 gi|28896602|ref|NP_802952.1| prolyl-tRNA synthetase [Streptococcus pyogenes SSI-1]
 gi|81847409|sp|Q8K5S7|SYP_STRP3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|21905437|gb|AAM80295.1| putative prolyl-tRNA synthetase [Streptococcus pyogenes MGAS315]
 gi|28811856|dbj|BAC64785.1| putative prolyl-tRNA synthetase [Streptococcus pyogenes SSI-1]
          Length = 618

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 55/102 (53%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  +++ +K  D++      F L P +      +  + +
Sbjct: 68  EMLAPALLTADLWRESGRYETYGEDLYKLKNRDNS-----DFILGPTHEETFTTLVRNAV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +  S YR+E     +GL+R R F   D + F
Sbjct: 123 KSYKQLPLNLYQIQSKYRDEKR-PRNGLLRTREFIMKDGYSF 163


>gi|323181612|gb|EFZ67027.1| prolyl-tRNA synthetase [Escherichia coli 1357]
          Length = 547

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 7/144 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E++ P V    LWQ+SG W+ Y   +  
Sbjct: 11  ASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELL- 69

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +  D   +  R F L P +      +  + L SY++LP+   +  + +R+E      G+
Sbjct: 70  -RFVD---RGERPFVLGPTHEEVITDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRF-GV 124

Query: 381 MRVRGFTQDDAHVFCTKEQMFNEC 404
           MR R F   DA+ F T ++   E 
Sbjct: 125 MRSREFLMKDAYSFHTSQESLQET 148


>gi|297544993|ref|YP_003677295.1| phosphoribulokinase/uridine kinase [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
 gi|296842768|gb|ADH61284.1| phosphoribulokinase/uridine kinase [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
          Length = 547

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 47/188 (25%), Positives = 86/188 (45%), Gaps = 3/188 (1%)

Query: 11  DGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRS 69
           +G+I  +P      D+A+          VA  ++ ++ DL+  V ++ ++E +       
Sbjct: 6   EGNIYEYPEGTKLEDIAKDFEHVYNGIIVAAKVDNELKDLNCTVSKDSTVEFVDTTIEEG 65

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
             + R S   +  +AV+ + P   V I   +  G Y +       ++  ++ I+K+M+EI
Sbjct: 66  TRIYRRSLTFVFIKAVKELLPGATVTIEHSLGKGLYCEIHGYS-LNNKIVSMIKKRMEEI 124

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
           I +D    ++ L  E+A +LFE +    KV + +    KE V +Y      D    P V 
Sbjct: 125 IEKDFKIERKMLPKEEAIKLFEKEGLTEKVRLFKDT-NKEKVPVYYCDGTVDFFYSPCVP 183

Query: 190 STGQVKKF 197
           STG +K F
Sbjct: 184 STGYLKVF 191


>gi|153806069|ref|ZP_01958737.1| hypothetical protein BACCAC_00320 [Bacteroides caccae ATCC 43185]
 gi|149130746|gb|EDM21952.1| hypothetical protein BACCAC_00320 [Bacteroides caccae ATCC 43185]
          Length = 557

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 41/184 (22%), Positives = 85/184 (46%), Gaps = 2/184 (1%)

Query: 15  KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVI 73
           K FP+ ++  D+    + +   + V+  +N +   L+  V     IE +   D   +   
Sbjct: 16  KEFPIGSSLLDIYYGFNLNFPYQVVSAKVNNRSEGLNFRVYNNKDIEFLDVRDQSGMRTY 75

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
             S   ++ +AV  ++PE ++ +   +  G++ +    +P   +++ +I+++MQEIIA +
Sbjct: 76  VRSLCFVLFKAVTELFPEGKLFVEHPVSKGYFCNLRIGRPIELEDVKRIKQRMQEIIAEN 135

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQ 193
            P+ +      +A  +F  +    KV +LE+         Y  G+  D   G  + STG 
Sbjct: 136 IPYHRIECHTAEAVRIFSERGMNDKVRLLET-SGSLYTYYYTLGDTVDYYYGNLLPSTGY 194

Query: 194 VKKF 197
           +K F
Sbjct: 195 LKLF 198


>gi|56459994|ref|YP_155275.1| prolyl-tRNA synthetase [Idiomarina loihiensis L2TR]
 gi|81821672|sp|Q5QW31|SYP_IDILO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|56179004|gb|AAV81726.1| Prolyl-tRNA synthetase [Idiomarina loihiensis L2TR]
          Length = 567

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 8/162 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            +G+  W   G ++ + + + +R +++  +  EI  P V    LWQ+SG WD Y   +  
Sbjct: 36  AAGLYTWTPTGLRVLRKVENVVREEMEAINALEILMPMVQPADLWQESGRWDDYGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +K      ++ R F L P +      +    + SY++LP+ L +  + +R+E      G+
Sbjct: 96  IKD-----RNQRDFLLGPTHEEIISQLVRKEVSSYKQLPLTLFQIQTKFRDEIRPRF-GV 149

Query: 381 MRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFE 421
           MR R F   DA+ F  T E +      ++     I++  G +
Sbjct: 150 MRAREFLMKDAYSFHLTDESLQKTYDDMYKAYCRIFERLGLD 191


>gi|290890493|ref|ZP_06553568.1| hypothetical protein AWRIB429_0958 [Oenococcus oeni AWRIB429]
 gi|290479889|gb|EFD88538.1| hypothetical protein AWRIB429_0958 [Oenococcus oeni AWRIB429]
          Length = 570

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 75/144 (52%), Gaps = 10/144 (6%)

Query: 274 KIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           +I   + S +R ++ + D  E+  P+++   LW++SG + +Y   M+ +K   D     R
Sbjct: 48  RIINKIESIIREEMSRIDANEMLMPEMIPAELWKESGRFYTYGPQMYQLKDRHD-----R 102

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
            F + P +      + +  +KSY++LP+ L +    +R+E     +GL+R R F   DA+
Sbjct: 103 EFIMAPTHEETFTKIISDEIKSYKKLPLILYQIQQKFRDELRPK-NGLLRGREFIMKDAY 161

Query: 393 VFCTKEQMFNECLKIHNLIISIYK 416
            F + ++  ++    ++LI S YK
Sbjct: 162 SFSSDQKGLDDA---YDLIESAYK 182


>gi|116330596|ref|YP_800314.1| prolyl-tRNA synthetase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|122281649|sp|Q04U64|SYP_LEPBJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|116124285|gb|ABJ75556.1| Prolyl-tRNA ligase [Leptospira borgpetersenii serovar Hardjo-bovis
           JB197]
          Length = 576

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 64/133 (48%), Gaps = 7/133 (5%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           +G+ F+   G KI Q +   +R ++ K    E + P +     W+QSG W +    MF +
Sbjct: 37  AGLYFYLPLGLKILQKIKQIIREEMNKTGALEFDLPILTPSDFWEQSGRWTAMGKEMFRI 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           K   D      ++AL P +      +    LKSY++LP+ + +  + +R+E      G++
Sbjct: 97  KDRHDL-----SYALGPTHEESFSFLLKPLLKSYKDLPLNVYQIQTKFRDEIRPRF-GVI 150

Query: 382 RVRGFTQDDAHVF 394
           R R F   DA+ F
Sbjct: 151 RSREFIMKDAYSF 163


>gi|6434818|gb|AAF08322.1|U31860_1 threonyl-tRNA synthetase [Streptococcus pyogenes]
          Length = 70

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 29/70 (41%), Positives = 43/70 (61%), Gaps = 2/70 (2%)

Query: 245 DHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQ 302
           DHRKL +E+DLF I+++ G G+ FW   G  I +TL  Y+  K +   Y+ + TP +   
Sbjct: 1   DHRKLGKELDLFMISQEVGQGLPFWLPDGATIRRTLERYITDKELASGYQHVYTPPLASV 60

Query: 303 HLWQQSGHWD 312
            L++ SGHWD
Sbjct: 61  ELYKTSGHWD 70


>gi|332978157|gb|EGK14892.1| proline--tRNA ligase [Psychrobacter sp. 1501(2011)]
          Length = 576

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 70/155 (45%), Gaps = 15/155 (9%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G K+ Q +   +R ++++   +E+  P      LWQ+SG ++ Y   +  
Sbjct: 36  ASGLYVWLPMGLKVLQKVEKIVREEMQNIGAQEVLMPMTQPAELWQESGRFEDYGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
                 T +  R F L P +      +    L+SY++LPV   +    +R+E      G+
Sbjct: 96  F-----TDRHNRDFVLGPTHEEVITDLARGELRSYKQLPVTFFQIQGKFRDEIRPRF-GI 149

Query: 381 MRVRGFTQDDAHVF--------CTKEQMFNECLKI 407
           MR R FT  DA+ F         T +QM++   +I
Sbjct: 150 MRAREFTMKDAYSFHVDQASLEITYQQMYDAYTRI 184


>gi|58337540|ref|YP_194125.1| prolyl-tRNA synthetase [Lactobacillus acidophilus NCFM]
 gi|227904181|ref|ZP_04021986.1| prolyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
 gi|81311450|sp|Q5FJN0|SYP_LACAC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|58254857|gb|AAV43094.1| prolyl-tRNA synthetase [Lactobacillus acidophilus NCFM]
 gi|227868200|gb|EEJ75621.1| prolyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
          Length = 565

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 39/146 (26%), Positives = 73/146 (50%), Gaps = 8/146 (5%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
           +I +  +GV  +   G+++ +   S + +++ + +  E+  P +L   LWQ+SG +  Y 
Sbjct: 31  YIRQVTAGVYAYLPLGYRVLRKAESIIEQEMDNINVPEMMMPHLLPATLWQESGRYQKYG 90

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
           A MF +K      +  R   L P +      +    LKSY+++P+ L +  + +R+E   
Sbjct: 91  AEMFKLKD-----RHGRESLLGPTHEETFTEIIAKNLKSYKQMPLALYQIQTKFRDENRP 145

Query: 376 SLHGLMRVRGFTQDDAHVF-CTKEQM 400
              GL+R R F   D + F  T+EQ+
Sbjct: 146 RF-GLLRGREFVMLDGYSFAATREQL 170


>gi|160883649|ref|ZP_02064652.1| hypothetical protein BACOVA_01621 [Bacteroides ovatus ATCC 8483]
 gi|237722870|ref|ZP_04553351.1| uridine kinase [Bacteroides sp. 2_2_4]
 gi|293373430|ref|ZP_06619785.1| phosphoribulokinase/uridine kinase family protein [Bacteroides
           ovatus SD CMC 3f]
 gi|299147561|ref|ZP_07040625.1| phosphoribulokinase family protein [Bacteroides sp. 3_1_23]
 gi|156111062|gb|EDO12807.1| hypothetical protein BACOVA_01621 [Bacteroides ovatus ATCC 8483]
 gi|229447392|gb|EEO53183.1| uridine kinase [Bacteroides sp. 2_2_4]
 gi|292631568|gb|EFF50191.1| phosphoribulokinase/uridine kinase family protein [Bacteroides
           ovatus SD CMC 3f]
 gi|298514348|gb|EFI38233.1| phosphoribulokinase family protein [Bacteroides sp. 3_1_23]
          Length = 557

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/184 (21%), Positives = 85/184 (46%), Gaps = 2/184 (1%)

Query: 15  KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVI 73
           K FP+ ++  D+    + +   + V+  +N +   L+  V     +E +   D   +   
Sbjct: 16  KEFPIGSSLLDIYYGFNLNFPYQVVSAKVNNRSEGLNFRVYNNKDVEFLDVRDQSGMRTY 75

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
             S   ++ +AV  ++PE ++ +   +  G++ +    +P   +++ +I+++MQEIIA +
Sbjct: 76  VRSLCFVLFKAVTELFPEGKLFVEHPVSKGYFCNLRIGRPIELEDVTRIKQRMQEIIAEN 135

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQ 193
            P+ +      +A  +F  +    KV +LE+         Y  G+  D   G  + STG 
Sbjct: 136 IPYHRIECHTAEAVRVFSERGMNDKVRLLET-SGSLYTYYYTLGDTIDYYYGNLLPSTGY 194

Query: 194 VKKF 197
           +K F
Sbjct: 195 LKLF 198


>gi|15614982|ref|NP_243285.1| prolyl-tRNA synthetase [Bacillus halodurans C-125]
 gi|81857777|sp|Q9KA71|SYP_BACHD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|10175039|dbj|BAB06138.1| prolyl-tRNA synthetase [Bacillus halodurans C-125]
          Length = 569

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 73/151 (48%), Gaps = 7/151 (4%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  +G+  +     ++ + + S +R ++ +   +EI  P +    LWQ+SG W+ Y  
Sbjct: 32  IRQVAAGIYTYLPLARRVIRKIESIVREELDQTGAQEITMPTLHPAELWQESGRWEKYGD 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            +  +     T +  R FAL P +     ++    + SY++LP+ + +  S +R+E    
Sbjct: 92  ELMRL-----TDRHNRQFALGPTHEEVITSLIRDSINSYKKLPLNVYQIQSKFRDERRPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
             GL+R R F   DA+ F T  +  +E  K+
Sbjct: 147 F-GLLRGREFIMKDAYSFHTGGESLDEMYKV 176


>gi|116491012|ref|YP_810556.1| prolyl-tRNA synthetase [Oenococcus oeni PSU-1]
 gi|122276806|sp|Q04F81|SYP_OENOB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|116091737|gb|ABJ56891.1| Prolyl-tRNA synthetase [Oenococcus oeni PSU-1]
          Length = 570

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 75/144 (52%), Gaps = 10/144 (6%)

Query: 274 KIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           +I   + S +R ++ + D  E+  P+++   LW++SG + +Y   M+ +K   D     R
Sbjct: 48  RIINKIESIIREEMNRIDANEMLMPEMIPAELWKESGRFYTYGPQMYQLKDRHD-----R 102

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
            F + P +      + +  +KSY++LP+ L +    +R+E     +GL+R R F   DA+
Sbjct: 103 EFIMAPTHEETFTKIISDEIKSYKKLPLILYQIQQKFRDELRPK-NGLLRGREFIMKDAY 161

Query: 393 VFCTKEQMFNECLKIHNLIISIYK 416
            F + ++  ++    ++LI S YK
Sbjct: 162 SFSSDQKGLDDA---YDLIESAYK 182


>gi|327446413|gb|EGE93067.1| prolyl-tRNA synthetase [Propionibacterium acnes HL013PA2]
          Length = 581

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 48/198 (24%), Positives = 93/198 (46%), Gaps = 19/198 (9%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   HR L R   +  +A    GV  W   G ++ + + +  R ++     +E++ P 
Sbjct: 15  DAEVPSHRWLVRAGYIRRVA---PGVYSWLPLGLRVMRRIEAICREEMASIGAQEVSFPA 71

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L    ++++G W  Y  N+F        +KD +   +  +  P H  +F   +K    S
Sbjct: 72  LLASDPYKETGRWVEYGDNLF-------RLKDRKGVDM--LLGPTHEEMFTLMVKDLYSS 122

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH-NLIIS 413
           Y++LP+ L +  + YR+E +    G++R R F   DA+ F   ++  +E  +   +  I 
Sbjct: 123 YKDLPLCLYQIQNKYRDE-ARPRAGILRGREFVMMDAYSFDVAQEGLDEAYQAQRDAYIR 181

Query: 414 IYKDFGFEKIMVKLSTRP 431
           I+   GF+  +VK  + P
Sbjct: 182 IFNRLGFDYAIVKAMSGP 199


>gi|313811577|gb|EFS49291.1| prolyl-tRNA synthetase [Propionibacterium acnes HL083PA1]
          Length = 581

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 48/198 (24%), Positives = 93/198 (46%), Gaps = 19/198 (9%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   HR L R   +  +A    GV  W   G ++ + + +  R ++     +E++ P 
Sbjct: 15  DAEVPSHRWLVRAGYIRRVA---PGVYSWLPLGLRVMRRIEAICREEMASIGAQEVSFPA 71

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L    ++++G W  Y  N+F        +KD +   +  +  P H  +F   +K    S
Sbjct: 72  LLASDPYKETGRWVEYGDNLF-------RLKDRKGVDM--LLGPTHEEMFTLMVKDLYSS 122

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH-NLIIS 413
           Y++LP+ L +  + YR+E +    G++R R F   DA+ F   ++  +E  +   +  I 
Sbjct: 123 YKDLPLCLYQIQNKYRDE-ARPRAGILRGREFVMMDAYSFDVAQEGLDEAYQAQRDAYIR 181

Query: 414 IYKDFGFEKIMVKLSTRP 431
           I+   GF+  +VK  + P
Sbjct: 182 IFNRLGFDYAIVKAMSGP 199


>gi|303228556|ref|ZP_07315384.1| proline--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
 gi|302516803|gb|EFL58717.1| proline--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
          Length = 572

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 61/124 (49%), Gaps = 7/124 (5%)

Query: 272 GWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           GW+  + + + +R ++ +   +EI  P +    +W++SG W++Y A M  +    D    
Sbjct: 46  GWRSIKKIEAIIREEMDRSGAQEIMMPILQPAEIWKESGRWNAYGAEMMRINDRHDV--- 102

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
              + L P +      +  + + SYR+LPV L +  S +R+E     +GLMR R F   D
Sbjct: 103 --EYCLGPTHEEMITTLVKNEINSYRQLPVNLYQIQSKFRDE-RRPRYGLMRSREFIMKD 159

Query: 391 AHVF 394
            + F
Sbjct: 160 GYSF 163


>gi|289550945|ref|YP_003471849.1| Bacterial type prolyl-tRNA synthetase [Staphylococcus lugdunensis
           HKU09-01]
 gi|315658447|ref|ZP_07911319.1| proline--tRNA ligase [Staphylococcus lugdunensis M23590]
 gi|289180477|gb|ADC87722.1| Bacterial type prolyl-tRNA synthetase [Staphylococcus lugdunensis
           HKU09-01]
 gi|315496776|gb|EFU85099.1| proline--tRNA ligase [Staphylococcus lugdunensis M23590]
          Length = 566

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 44/175 (25%), Positives = 79/175 (45%), Gaps = 13/175 (7%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  SG+  +     ++   +   +R +++  D  EI  P +    LW++SG W +Y  
Sbjct: 32  IKQSTSGIYSYLPLATRVLNNISKIIREEMERIDAVEILMPVLQQAELWEESGRWSAYGP 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            +  +K      ++ R FAL P +     ++    LKSY+ LP+ L +  S +R+E    
Sbjct: 92  ELMRLKD-----RNGREFALGPTHEEVVTSLVRDELKSYKRLPLTLFQIQSKFRDEKRPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP 431
             GL+R R F   DA+ F   E   +   +       +Y+ +G     V ++ RP
Sbjct: 147 F-GLLRGREFIMKDAYSFHADEASLDATYQ------DMYQAYGRIFKRVGINVRP 194


>gi|257125504|ref|YP_003163618.1| prolyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
 gi|257049443|gb|ACV38627.1| prolyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
          Length = 570

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 46/186 (24%), Positives = 85/186 (45%), Gaps = 11/186 (5%)

Query: 256 FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSY 314
           F I +   GV  +   G+++ + + +  R ++ +   +E+  P +    LW++SG W +Y
Sbjct: 30  FMINQLTRGVYTYLPFGYRVLKKIENITREEMDRAGAQELLMPVLQPASLWEESGRWFAY 89

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
              +  +K  ++     R F+L P +      V    + SY+ELP  + +  + +R+E  
Sbjct: 90  GPELMRLKDRNE-----REFSLGPTHEEVITDVVRDSISSYKELPFNVYQIQTKFRDEMR 144

Query: 375 GSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
               GLMR R F   D + F  T+E +  E L + +    I++  G     V+  T    
Sbjct: 145 PRF-GLMRGREFVMKDGYSFHLTQESLDEEYLNMKDTYSRIFERMGLNYRAVEADT---G 200

Query: 434 RVGSDA 439
            +G DA
Sbjct: 201 SIGGDA 206


>gi|167856063|ref|ZP_02478806.1| prolyl-tRNA synthetase [Haemophilus parasuis 29755]
 gi|219871797|ref|YP_002476172.1| prolyl-tRNA synthetase [Haemophilus parasuis SH0165]
 gi|254782903|sp|B8F7C2|SYP_HAEPS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|167852812|gb|EDS24083.1| prolyl-tRNA synthetase [Haemophilus parasuis 29755]
 gi|219692001|gb|ACL33224.1| prolyl-tRNA synthetase [Haemophilus parasuis SH0165]
          Length = 571

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 46/194 (23%), Positives = 85/194 (43%), Gaps = 10/194 (5%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-K 288
           +QYL+   +    D + ++ ++ L    I    SG+  W   G ++ + + + +R ++ K
Sbjct: 4   SQYLFSTLKETPNDAQVVSHQLMLRAGMIRPLASGMYNWLPTGLRVLKKVENIIREEMNK 63

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
               E+  P V    LW +S  W+ Y   +   K   D     R F L P +      + 
Sbjct: 64  SGALEVEMPVVQPADLWVESERWEDYGPELLRFKDRGD-----RPFVLGPTHEEVITDLV 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI- 407
              + SY++LP+ L +  + +R+E      G+MR R F   DA+ F T ++   E   + 
Sbjct: 119 RREVSSYKQLPLNLYQIQTKFRDEVRPRF-GVMRGREFLMKDAYSFHTSKESLQETYDVM 177

Query: 408 HNLIISIYKDFGFE 421
           H    +I+   G +
Sbjct: 178 HQTYSNIFTRLGLD 191


>gi|50842977|ref|YP_056204.1| prolyl-tRNA synthetase [Propionibacterium acnes KPA171202]
 gi|289428734|ref|ZP_06430417.1| proline--tRNA ligase [Propionibacterium acnes J165]
 gi|295131048|ref|YP_003581711.1| proline--tRNA ligase [Propionibacterium acnes SK137]
 gi|81826419|sp|Q6A7L9|SYP_PROAC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|50840579|gb|AAT83246.1| prolyl-tRNA synthetase [Propionibacterium acnes KPA171202]
 gi|289158132|gb|EFD06352.1| proline--tRNA ligase [Propionibacterium acnes J165]
 gi|291375052|gb|ADD98906.1| proline--tRNA ligase [Propionibacterium acnes SK137]
 gi|332675928|gb|AEE72744.1| proline--tRNA ligase [Propionibacterium acnes 266]
          Length = 585

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 48/198 (24%), Positives = 93/198 (46%), Gaps = 19/198 (9%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   HR L R   +  +A    GV  W   G ++ + + +  R ++     +E++ P 
Sbjct: 19  DAEVPSHRWLVRAGYIRRVA---PGVYSWLPLGLRVMRRIEAICREEMASIGAQEVSFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L    ++++G W  Y  N+F        +KD +   +  +  P H  +F   +K    S
Sbjct: 76  LLASDPYKETGRWVEYGDNLF-------RLKDRKGVDM--LLGPTHEEMFTLMVKDLYSS 126

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH-NLIIS 413
           Y++LP+ L +  + YR+E +    G++R R F   DA+ F   ++  +E  +   +  I 
Sbjct: 127 YKDLPLCLYQIQNKYRDE-ARPRAGILRGREFVMMDAYSFDVAQEGLDEAYQAQRDAYIR 185

Query: 414 IYKDFGFEKIMVKLSTRP 431
           I+   GF+  +VK  + P
Sbjct: 186 IFNRLGFDYAIVKAMSGP 203


>gi|327334245|gb|EGE75959.1| proline--tRNA ligase [Propionibacterium acnes HL097PA1]
          Length = 581

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 48/198 (24%), Positives = 93/198 (46%), Gaps = 19/198 (9%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   HR L R   +  +A    GV  W   G ++ + + +  R ++     +E++ P 
Sbjct: 15  DAEVPSHRWLVRAGYIRRVA---PGVYSWLPLGLRVMRRIEAICREEMASIGAQEVSFPA 71

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L    ++++G W  Y  N+F        +KD +   +  +  P H  +F   +K    S
Sbjct: 72  LLASDPYKETGRWVEYGDNLF-------RLKDRKGVDM--LLGPTHEEMFTLMVKDLYSS 122

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH-NLIIS 413
           Y++LP+ L +  + YR+E +    G++R R F   DA+ F   ++  +E  +   +  I 
Sbjct: 123 YKDLPLCLYQIQNKYRDE-ARPRAGILRGREFVMMDAYSFDVAQEGLDEAYQAQRDAYIR 181

Query: 414 IYKDFGFEKIMVKLSTRP 431
           I+   GF+  +VK  + P
Sbjct: 182 IFNRLGFDYAIVKAMSGP 199


>gi|312195504|ref|YP_004015565.1| prolyl-tRNA synthetase [Frankia sp. EuI1c]
 gi|311226840|gb|ADP79695.1| prolyl-tRNA synthetase [Frankia sp. EuI1c]
          Length = 580

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 79/168 (47%), Gaps = 10/168 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E  +HR L R     ++ +  SG+  +   G ++ + + + +R+++     +E+  P 
Sbjct: 27  DAETANHRLLVRG---GYVRKAASGIYSYLPLGLRVLRRIEAVVRQEMAAAGCQELLMPA 83

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++ + LW +SG W  Y   MF V     T      F L P +     ++  + L  +R+L
Sbjct: 84  LMPRELWDRSGRWADYGDLMFRVVDRKGT-----EFCLGPTHEELITSLVANELGGHRDL 138

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           P+R+ +  + YR+E      GL+R R F   DA+ F   E    E  +
Sbjct: 139 PLRVFQIQTKYRDELR-PRSGLVRSRDFVMKDAYTFHADEDSLRETYR 185


>gi|303232046|ref|ZP_07318749.1| proline--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
 gi|302513152|gb|EFL55191.1| proline--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
          Length = 572

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 61/124 (49%), Gaps = 7/124 (5%)

Query: 272 GWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           GW+  + + + +R ++ +   +EI  P +    +W++SG W++Y A M  +    D    
Sbjct: 46  GWRSIKKIEAIIREEMDRSGAQEIMMPILQPAEIWKESGRWNAYGAEMMRINDRHDV--- 102

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
              + L P +      +  + + SYR+LPV L +  S +R+E     +GLMR R F   D
Sbjct: 103 --EYCLGPTHEEMITTLVKNEINSYRQLPVNLYQIQSKFRDE-RRPRYGLMRSREFIMKD 159

Query: 391 AHVF 394
            + F
Sbjct: 160 GYSF 163


>gi|313793980|gb|EFS42004.1| prolyl-tRNA synthetase [Propionibacterium acnes HL110PA1]
 gi|313801367|gb|EFS42618.1| prolyl-tRNA synthetase [Propionibacterium acnes HL110PA2]
 gi|313839912|gb|EFS77626.1| prolyl-tRNA synthetase [Propionibacterium acnes HL086PA1]
 gi|314963668|gb|EFT07768.1| prolyl-tRNA synthetase [Propionibacterium acnes HL082PA1]
 gi|315079518|gb|EFT51511.1| prolyl-tRNA synthetase [Propionibacterium acnes HL053PA2]
 gi|327451998|gb|EGE98652.1| prolyl-tRNA synthetase [Propionibacterium acnes HL092PA1]
          Length = 581

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 48/198 (24%), Positives = 93/198 (46%), Gaps = 19/198 (9%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   HR L R   +  +A    GV  W   G ++ + + +  R ++     +E++ P 
Sbjct: 15  DAEVPSHRWLVRAGYIRRVA---PGVYSWLPLGLRVMRRIEAICREEMASIGAQEVSFPA 71

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L    ++++G W  Y  N+F        +KD +   +  +  P H  +F   +K    S
Sbjct: 72  LLASDPYKETGRWVEYGDNLF-------RLKDRKGVDM--LLGPTHEEMFTLMVKDLYSS 122

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH-NLIIS 413
           Y++LP+ L +  + YR+E +    G++R R F   DA+ F   ++  +E  +   +  I 
Sbjct: 123 YKDLPLCLYQIQNKYRDE-ARPRAGILRGREFVMMDAYSFDVAQEGLDEAYQAQRDAYIR 181

Query: 414 IYKDFGFEKIMVKLSTRP 431
           I+   GF+  +VK  + P
Sbjct: 182 IFNRLGFDYAIVKAMSGP 199


>gi|313763586|gb|EFS34950.1| prolyl-tRNA synthetase [Propionibacterium acnes HL013PA1]
 gi|313807954|gb|EFS46435.1| prolyl-tRNA synthetase [Propionibacterium acnes HL087PA2]
 gi|313822153|gb|EFS59867.1| prolyl-tRNA synthetase [Propionibacterium acnes HL036PA1]
 gi|313823613|gb|EFS61327.1| prolyl-tRNA synthetase [Propionibacterium acnes HL036PA2]
 gi|313825936|gb|EFS63650.1| prolyl-tRNA synthetase [Propionibacterium acnes HL063PA1]
 gi|314914740|gb|EFS78571.1| prolyl-tRNA synthetase [Propionibacterium acnes HL005PA4]
 gi|314919298|gb|EFS83129.1| prolyl-tRNA synthetase [Propionibacterium acnes HL050PA1]
 gi|314920792|gb|EFS84623.1| prolyl-tRNA synthetase [Propionibacterium acnes HL050PA3]
 gi|314924644|gb|EFS88475.1| prolyl-tRNA synthetase [Propionibacterium acnes HL036PA3]
 gi|314930471|gb|EFS94302.1| prolyl-tRNA synthetase [Propionibacterium acnes HL067PA1]
 gi|314954371|gb|EFS98777.1| prolyl-tRNA synthetase [Propionibacterium acnes HL027PA1]
 gi|314957443|gb|EFT01546.1| prolyl-tRNA synthetase [Propionibacterium acnes HL002PA1]
 gi|314962089|gb|EFT06190.1| prolyl-tRNA synthetase [Propionibacterium acnes HL002PA2]
 gi|314968504|gb|EFT12602.1| prolyl-tRNA synthetase [Propionibacterium acnes HL037PA1]
 gi|314978817|gb|EFT22911.1| prolyl-tRNA synthetase [Propionibacterium acnes HL072PA2]
 gi|314986526|gb|EFT30618.1| prolyl-tRNA synthetase [Propionibacterium acnes HL005PA2]
 gi|314990885|gb|EFT34976.1| prolyl-tRNA synthetase [Propionibacterium acnes HL005PA3]
 gi|315081252|gb|EFT53228.1| prolyl-tRNA synthetase [Propionibacterium acnes HL078PA1]
 gi|315083450|gb|EFT55426.1| prolyl-tRNA synthetase [Propionibacterium acnes HL027PA2]
 gi|315087136|gb|EFT59112.1| prolyl-tRNA synthetase [Propionibacterium acnes HL002PA3]
 gi|315089308|gb|EFT61284.1| prolyl-tRNA synthetase [Propionibacterium acnes HL072PA1]
 gi|315099214|gb|EFT71190.1| prolyl-tRNA synthetase [Propionibacterium acnes HL059PA2]
 gi|315100435|gb|EFT72411.1| prolyl-tRNA synthetase [Propionibacterium acnes HL046PA1]
 gi|315106771|gb|EFT78747.1| prolyl-tRNA synthetase [Propionibacterium acnes HL030PA1]
 gi|315109012|gb|EFT80988.1| prolyl-tRNA synthetase [Propionibacterium acnes HL030PA2]
 gi|327329728|gb|EGE71484.1| proline--tRNA ligase [Propionibacterium acnes HL096PA3]
 gi|327454965|gb|EGF01620.1| prolyl-tRNA synthetase [Propionibacterium acnes HL087PA3]
 gi|327457749|gb|EGF04404.1| prolyl-tRNA synthetase [Propionibacterium acnes HL083PA2]
 gi|328752168|gb|EGF65784.1| prolyl-tRNA synthetase [Propionibacterium acnes HL020PA1]
 gi|328755200|gb|EGF68816.1| prolyl-tRNA synthetase [Propionibacterium acnes HL087PA1]
 gi|328758320|gb|EGF71936.1| prolyl-tRNA synthetase [Propionibacterium acnes HL025PA2]
          Length = 581

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 48/198 (24%), Positives = 93/198 (46%), Gaps = 19/198 (9%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   HR L R   +  +A    GV  W   G ++ + + +  R ++     +E++ P 
Sbjct: 15  DAEVPSHRWLVRAGYIRRVA---PGVYSWLPLGLRVMRRIEAICREEMASIGAQEVSFPA 71

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L    ++++G W  Y  N+F        +KD +   +  +  P H  +F   +K    S
Sbjct: 72  LLASDPYKETGRWVEYGDNLF-------RLKDRKGVDM--LLGPTHEEMFTLMVKDLYSS 122

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH-NLIIS 413
           Y++LP+ L +  + YR+E +    G++R R F   DA+ F   ++  +E  +   +  I 
Sbjct: 123 YKDLPLCLYQIQNKYRDE-ARPRAGILRGREFVMMDAYSFDVAQEGLDEAYQAQRDAYIR 181

Query: 414 IYKDFGFEKIMVKLSTRP 431
           I+   GF+  +VK  + P
Sbjct: 182 IFNRLGFDYAIVKAMSGP 199


>gi|260910547|ref|ZP_05917215.1| phosphoribulokinase [Prevotella sp. oral taxon 472 str. F0295]
 gi|260635389|gb|EEX53411.1| phosphoribulokinase [Prevotella sp. oral taxon 472 str. F0295]
          Length = 553

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 38/180 (21%), Positives = 81/180 (45%), Gaps = 2/180 (1%)

Query: 19  VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIRHSC 77
           + +T  DV   +   +    V   +N K+  +   +     +E +    P +      + 
Sbjct: 20  IGSTLYDVFHELKLDMPYGPVNAKVNNKIEGMHYRLYHNKDVEFLDLHSPSAHRAYTRTL 79

Query: 78  AHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFL 137
             ++ +AV  ++P  +V I   + +G+Y D D ++P +  +   I ++MQ+IIA   P  
Sbjct: 80  FFVLCKAVHDLYPHSRVVIDIPVSNGYYVDLDIQRPVTPQDADDIRQRMQQIIAARMPIS 139

Query: 138 KQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
           +   + E A  +F+   +  KV +LE++      T Y+   + D   G  + +T +++ F
Sbjct: 140 RHETTTEAAIAMFKKVGDESKVRLLETV-GTLYTTYYQLDRYVDYYYGSLLTNTRELRLF 198


>gi|116327681|ref|YP_797401.1| prolyl-tRNA synthetase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|122284523|sp|Q053M7|SYP_LEPBL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|116120425|gb|ABJ78468.1| Prolyl-tRNA ligase [Leptospira borgpetersenii serovar Hardjo-bovis
           L550]
          Length = 576

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 64/133 (48%), Gaps = 7/133 (5%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           +G+ F+   G KI Q +   +R ++ K    E + P +     W+QSG W +    MF +
Sbjct: 37  AGLYFYLPLGLKILQKIKQIIREEMNKTGALEFDLPILTPSDFWEQSGRWTAMGKEMFRI 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           K   D      ++AL P +      +    LKSY++LP+ + +  + +R+E      G++
Sbjct: 97  KDRHDL-----SYALGPTHEESFSFLLKPLLKSYKDLPLNVYQIQTKFRDEIRPRF-GVI 150

Query: 382 RVRGFTQDDAHVF 394
           R R F   DA+ F
Sbjct: 151 RSREFIMKDAYSF 163


>gi|322831614|ref|YP_004211641.1| prolyl-tRNA synthetase [Rahnella sp. Y9602]
 gi|321166815|gb|ADW72514.1| prolyl-tRNA synthetase [Rahnella sp. Y9602]
          Length = 572

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 43/176 (24%), Positives = 82/176 (46%), Gaps = 9/176 (5%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           TQYL    +    D   ++ ++ L    I +  SG+  W   G ++ + + + +R ++ +
Sbjct: 4   TQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREEMNN 63

Query: 290 -DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
            +  E++ P V    LWQ+SG W+ Y   +   +  D   +  R F L P +      + 
Sbjct: 64  ANAIEVSMPVVQPADLWQESGRWEQYGPELL--RFVD---RGERPFVLGPTHEEVITDLI 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
            + + SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 119 RNEVSSYKQLPLNFFQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHTTQESLQET 173


>gi|34496029|ref|NP_900244.1| prolyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472]
 gi|81834766|sp|Q7P0J3|SYP_CHRVO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|34101883|gb|AAQ58250.1| prolyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472]
          Length = 568

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 66/138 (47%), Gaps = 7/138 (5%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  +G+  W   G ++ + + + +R ++ +    E++ P V    LWQ++G WD+  A
Sbjct: 32  IRKQAAGIYSWMPMGLRVVRKVETIIREEMNRAGGIEVSLPVVQPAELWQETGRWDAMGA 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            +   K      +  R FAL+P        +    L+SYR LP    +  + +R+E    
Sbjct: 92  ELLRFKD-----RHERDFALQPTAEEVITDIARRELRSYRALPKNFYQIQTKFRDERRPR 146

Query: 377 LHGLMRVRGFTQDDAHVF 394
             G+MR R FT  DA+ F
Sbjct: 147 F-GVMRGREFTMKDAYSF 163


>gi|313773524|gb|EFS39490.1| prolyl-tRNA synthetase [Propionibacterium acnes HL074PA1]
 gi|313831317|gb|EFS69031.1| prolyl-tRNA synthetase [Propionibacterium acnes HL007PA1]
 gi|313834927|gb|EFS72641.1| prolyl-tRNA synthetase [Propionibacterium acnes HL056PA1]
 gi|314974192|gb|EFT18288.1| prolyl-tRNA synthetase [Propionibacterium acnes HL053PA1]
 gi|314976699|gb|EFT20794.1| prolyl-tRNA synthetase [Propionibacterium acnes HL045PA1]
 gi|314984337|gb|EFT28429.1| prolyl-tRNA synthetase [Propionibacterium acnes HL005PA1]
 gi|315095331|gb|EFT67307.1| prolyl-tRNA synthetase [Propionibacterium acnes HL038PA1]
 gi|327328406|gb|EGE70168.1| proline--tRNA ligase [Propionibacterium acnes HL096PA2]
 gi|327444193|gb|EGE90847.1| prolyl-tRNA synthetase [Propionibacterium acnes HL043PA2]
 gi|327444928|gb|EGE91582.1| prolyl-tRNA synthetase [Propionibacterium acnes HL043PA1]
 gi|328760064|gb|EGF73644.1| proline--tRNA ligase [Propionibacterium acnes HL099PA1]
          Length = 581

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 48/198 (24%), Positives = 93/198 (46%), Gaps = 19/198 (9%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   HR L R   +  +A    GV  W   G ++ + + +  R ++     +E++ P 
Sbjct: 15  DAEVPSHRWLVRAGYIRRVA---PGVYSWLPLGLRVMRRIEAICREEMASIGAQEVSFPA 71

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L    ++++G W  Y  N+F        +KD +   +  +  P H  +F   +K    S
Sbjct: 72  LLASDPYKETGRWVEYGDNLF-------RLKDRKGVDM--LLGPTHEEMFTLMVKDLYSS 122

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH-NLIIS 413
           Y++LP+ L +  + YR+E +    G++R R F   DA+ F   ++  +E  +   +  I 
Sbjct: 123 YKDLPLCLYQIQNKYRDE-ARPRAGILRGREFVMMDAYSFDVAQEGLDEAYQAQRDAYIR 181

Query: 414 IYKDFGFEKIMVKLSTRP 431
           I+   GF+  +VK  + P
Sbjct: 182 IFNRLGFDYAIVKAMSGP 199


>gi|289830168|ref|ZP_06547590.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E98-3139]
          Length = 282

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 69/144 (47%), Gaps = 7/144 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E++ P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYTWLPTGLRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGRWEQYGPEL-- 93

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           ++  D   +  R F L P +      +  + L SY++LP+   +  + +R+E      G+
Sbjct: 94  LRFVD---RGERPFVLGPTHEEVITDLVRNELSSYKQLPLNFFQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNEC 404
           MR R F   DA+ F T ++   E 
Sbjct: 150 MRSREFLMKDAYSFHTSQESLQET 173


>gi|218661849|ref|ZP_03517779.1| prolyl-tRNA synthetase [Rhizobium etli IE4771]
          Length = 354

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 7/140 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E++ P +    LWQ+SG +D+Y   M  +K   D     R     P N      +F   +
Sbjct: 4   ELSMPTLQSAELWQESGRYDAYGKEMLRIKDRQD-----RPMLYGPTNEEMVTDIFRSSV 58

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLI 411
           KSY++LP+ L      +R+E      G MR R F   DA+ F  T+E   +   K+    
Sbjct: 59  KSYKDLPLNLYHIQLKFRDEIRPRF-GTMRSREFMMKDAYSFDLTREGAEHSYNKMFAAY 117

Query: 412 ISIYKDFGFEKIMVKLSTRP 431
           +  ++  G   I ++  T P
Sbjct: 118 LRTFERLGLRAIPMRADTGP 137


>gi|17232545|ref|NP_489093.1| prolyl-tRNA synthetase [Nostoc sp. PCC 7120]
 gi|81852728|sp|Q8YM83|SYP_ANASP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|17134191|dbj|BAB76752.1| prolyl-tRNA synthetase [Nostoc sp. PCC 7120]
          Length = 604

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 9/161 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           ++E   H+ L R     +I   GSG+  +    W++ Q +   +R ++     +E   PQ
Sbjct: 17  DAEIPSHKLLLRAG---YIRRIGSGIYAYLPLMWRVLQKVSQIVREEMNATGAQECLLPQ 73

Query: 299 VLDQHLWQQSGHWDSY-RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           +    LW++SG WD+Y +A        D   + L    L P +     A+    ++SYR+
Sbjct: 74  LQPSELWKESGRWDTYTKAEGIMFSLIDRREQQL---GLGPTHEEVITAIARDMIRSYRQ 130

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE 398
           LP+ L +  + +R+E      GLMR R F   D + F   E
Sbjct: 131 LPLHLYQLQTKFRDEIRPRF-GLMRGREFIMKDGYSFHVDE 170


>gi|317493988|ref|ZP_07952404.1| prolyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316917761|gb|EFV39104.1| prolyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 572

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 68/144 (47%), Gaps = 7/144 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E++ P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYTWMPTGLRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELL- 94

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +  D   +  R F L P +      +  + + SY++LP+   +  + +R+E      G+
Sbjct: 95  -RFVD---RGERPFVLGPTHEEVITDMVRNEISSYKQLPLNFFQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNEC 404
           MR R F   DA+ F T ++   E 
Sbjct: 150 MRSREFVMKDAYSFHTSQESLQET 173


>gi|148826625|ref|YP_001291378.1| prolyl-tRNA synthetase [Haemophilus influenzae PittEE]
 gi|166980127|sp|A5UDZ4|SYP_HAEIE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|148716785|gb|ABQ98995.1| prolyl-tRNA synthetase [Haemophilus influenzae PittEE]
          Length = 572

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 46/202 (22%), Positives = 90/202 (44%), Gaps = 10/202 (4%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-K 288
           +QYL+   +    D + ++ ++ L    I    SG+  W   G ++ + +   +R ++ K
Sbjct: 4   SQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMASGLYNWLPTGIRVLKKVEKIIREEMNK 63

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
               E+  P V    LW++SG W+ Y   +   +   +     R F L P +      + 
Sbjct: 64  GGAIEVLMPVVQPAELWEESGRWEQYGPELLRFEDRGN-----RNFVLGPTHEEVITDLI 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI- 407
              + SY++LP+ L +  + +R+E      G+MR R F   DA+ F T ++   E   + 
Sbjct: 119 RREVSSYKQLPLNLYQIQTKFRDEVRPRF-GVMRSREFIMKDAYSFHTTQESLQETYDVM 177

Query: 408 HNLIISIYKDFGFEKIMVKLST 429
           + +  +I+   G +   V+  T
Sbjct: 178 YQVYSNIFNRLGLDFRAVQADT 199


>gi|73666953|ref|YP_302969.1| prolyl-tRNA synthetase [Ehrlichia canis str. Jake]
 gi|114152194|sp|Q3YSD4|SYP_EHRCJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|72394094|gb|AAZ68371.1| Prolyl-tRNA synthetase [Ehrlichia canis str. Jake]
          Length = 424

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 82/179 (45%), Gaps = 14/179 (7%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  SG+  W   G ++ + + + +R ++ K    E+  P +    LW++SG +D Y +
Sbjct: 32  IKQIASGIYTWLPLGLRVLRNIENIVREEMNKSGALEVLMPLIQPASLWKESGRYDDYGS 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  +     T ++ R     P +           L S++ LP+ L +    +R+E    
Sbjct: 92  EMLRI-----TDRNQREMLFGPTHEEVITDTLRTTLTSHKNLPITLYQIQWKFRDELRPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI----ISIYKDFGFEKIMVKLSTRP 431
            +G+MR R F   DA+ F   ++  +  +  +NL+    I I+K+ G   I VK  + P
Sbjct: 147 -YGIMRCREFLMKDAYSF---DKDLSGAILSYNLMFKTYIKIFKNLGLTPIAVKAESGP 201


>gi|170723171|ref|YP_001750859.1| prolyl-tRNA synthetase [Pseudomonas putida W619]
 gi|226701321|sp|B1JD82|SYP_PSEPW RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|169761174|gb|ACA74490.1| prolyl-tRNA synthetase [Pseudomonas putida W619]
          Length = 571

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 44/194 (22%), Positives = 87/194 (44%), Gaps = 10/194 (5%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           +QYL   ++    D   ++ ++ L    I +  SG+  W   G ++ + + + +R ++  
Sbjct: 4   SQYLLATQKETPADAVVISHQLMLRAGMIRKLASGLYTWLPMGLRVMRKVEAVVREEMNA 63

Query: 290 DYE-EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
               E+  P +    LWQ+SG W+ Y   +  +K      +  R F + P +      + 
Sbjct: 64  AGALEVLMPSIQPAELWQESGRWEQYGPELLRLKD-----RHQRDFCVGPTHEEVITDLA 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KI 407
            + L SY++LP+ + +  + +R+E      GLMR R F   DA+ F   +    E   ++
Sbjct: 119 RNELSSYKQLPLNMYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSFHADQASLQETYDRM 177

Query: 408 HNLIISIYKDFGFE 421
           H    +I+   G +
Sbjct: 178 HQAYSNIFTRLGLD 191


>gi|313813363|gb|EFS51077.1| prolyl-tRNA synthetase [Propionibacterium acnes HL025PA1]
          Length = 581

 Score = 57.8 bits (138), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 48/198 (24%), Positives = 93/198 (46%), Gaps = 19/198 (9%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   HR L R   +  +A    GV  W   G ++ + + +  R ++     +E++ P 
Sbjct: 15  DAEVPSHRWLVRAGYIRRVA---PGVYSWLPLGLRVMRRIEAICREEMASIGAQEVSFPA 71

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L    ++++G W  Y  N+F        +KD +   +  +  P H  +F   +K    S
Sbjct: 72  LLASDPYKETGRWVEYGDNLF-------RLKDRKGVDM--LLGPTHEEMFTLMVKDLYSS 122

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH-NLIIS 413
           Y++LP+ L +  + YR+E +    G++R R F   DA+ F   ++  +E  +   +  I 
Sbjct: 123 YKDLPLCLYQIQNKYRDE-ARPRAGILRGREFVMMDAYSFDVAQEGLDEAYQAQRDAYIR 181

Query: 414 IYKDFGFEKIMVKLSTRP 431
           I+   GF+  +VK  + P
Sbjct: 182 IFNRLGFDYAIVKAMSGP 199


>gi|168177529|ref|ZP_02612193.1| putative threonyl-tRNA synthetase/uridine kinase [Clostridium
           botulinum NCTC 2916]
 gi|182670689|gb|EDT82663.1| putative threonyl-tRNA synthetase/uridine kinase [Clostridium
           botulinum NCTC 2916]
          Length = 552

 Score = 57.8 bits (138), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 85/194 (43%), Gaps = 2/194 (1%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           +KL  P+GS        T  DV +          V   I+ +  +L+  V+ EG    + 
Sbjct: 4   LKLYMPNGSNILVSGDKTLYDVVKENKLQDNIPIVLGKIDEEYYELTSTVKKEGVFIPVD 63

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
             D   L     +   I  +AV  ++PE  V I   +  G Y +  K    + +++ +I+
Sbjct: 64  ITDSMGLKTYVRTLQFIFIKAVLDLYPESTVVIEHSLGKGLYGEIHKTLSLNENDILKIK 123

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M EII +D    K  +  E+A E+F   K   KV +L  IP +E V LY     +D  
Sbjct: 124 NRMNEIINKDIKIKKISVKKERAIEIFNEYKMKDKVRLLNHIPHEE-VKLYELDGRYDYF 182

Query: 184 RGPHVRSTGQVKKF 197
            GP   STG +K F
Sbjct: 183 YGPMAYSTGAIKNF 196


>gi|145630468|ref|ZP_01786248.1| frataxin-like protein [Haemophilus influenzae R3021]
 gi|144983858|gb|EDJ91300.1| frataxin-like protein [Haemophilus influenzae R3021]
          Length = 572

 Score = 57.8 bits (138), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 46/202 (22%), Positives = 90/202 (44%), Gaps = 10/202 (4%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-K 288
           +QYL+   +    D + ++ ++ L    I    SG+  W   G ++ + +   +R ++ K
Sbjct: 4   SQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMASGLYNWLPTGIRVLKKVEKIIREEMNK 63

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
               E+  P V    LW++SG W+ Y   +   +   +     R F L P +      + 
Sbjct: 64  GGAIEVLMPVVQPAELWEESGRWEQYGPELLRFEDRGN-----RNFVLGPTHEEVITDLV 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI- 407
              + SY++LP+ L +  + +R+E      G+MR R F   DA+ F T ++   E   + 
Sbjct: 119 RREVSSYKQLPLNLYQIQTKFRDEVRPRF-GVMRSREFIMKDAYSFHTTQESLQETYDVM 177

Query: 408 HNLIISIYKDFGFEKIMVKLST 429
           + +  +I+   G +   V+  T
Sbjct: 178 YQVYSNIFNRLGLDFRAVQADT 199


>gi|330814001|ref|YP_004358240.1| prolyl-tRNA synthetase Bacterial type [Candidatus Pelagibacter sp.
           IMCC9063]
 gi|327487096|gb|AEA81501.1| prolyl-tRNA synthetase Bacterial type [Candidatus Pelagibacter sp.
           IMCC9063]
          Length = 441

 Score = 57.8 bits (138), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 78/183 (42%), Gaps = 11/183 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  SG+  W   G+K+ + + S +R  + K   +E+  P +    LW++SG +D Y  
Sbjct: 32  IRQSASGIYSWLPLGFKVLKKIESIVRDEQNKAGAQEMLMPTIQSADLWKESGRYDGYGL 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  ++   D     R     P N      +F   +K+Y+ LP+ L      +R+E    
Sbjct: 92  EMLRIRDRQD-----RELLYGPTNEELITQIFRDNVKTYKSLPLILYHIQWKFRDEIRPR 146

Query: 377 LHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
             G+MR R F   D++ F   KE       K+    +  ++  G   I +   T P   +
Sbjct: 147 F-GIMRCREFLMKDSYSFDENKEGAIISYNKMFCAYLKTFERLGLRAIPMAADTGP---I 202

Query: 436 GSD 438
           G D
Sbjct: 203 GGD 205


>gi|148652560|ref|YP_001279653.1| prolyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
 gi|172048509|sp|A5WDG2|SYP_PSYWF RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|148571644|gb|ABQ93703.1| prolyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
          Length = 576

 Score = 57.8 bits (138), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 70/155 (45%), Gaps = 15/155 (9%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G K+ Q +   +R ++++   +E+  P      LWQ+SG ++ Y   +  
Sbjct: 36  ASGLYVWLPMGLKVLQKVEKIVREEMQNIGGQEVLMPMTQPAELWQESGRFEDYGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
                 T +  R F L P +      +    L+SY++LPV   +    +R+E      G+
Sbjct: 96  F-----TDRHNRDFVLGPTHEEVITDLARGELRSYKQLPVTFFQIQGKFRDEIRPRF-GI 149

Query: 381 MRVRGFTQDDAHVF--------CTKEQMFNECLKI 407
           MR R FT  DA+ F         T +QM++   +I
Sbjct: 150 MRAREFTMKDAYSFHVDQASLEVTYQQMYDAYTRI 184


>gi|317052052|ref|YP_004113168.1| prolyl-tRNA synthetase [Desulfurispirillum indicum S5]
 gi|316947136|gb|ADU66612.1| prolyl-tRNA synthetase [Desulfurispirillum indicum S5]
          Length = 572

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 34/139 (24%), Positives = 63/139 (45%), Gaps = 7/139 (5%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYR 315
           +I +  +G+  +    W++ + + + +R ++ ++  EE+  P  L   LW +SG W  Y 
Sbjct: 31  YIKKTAAGIYSYLPLAWRVLRKIENIIREEMTREGAEELMMPAALPAELWMESGRWQKYG 90

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
             +   +      +  R F + P +      +  H + SYR LP  L +  + +R+E   
Sbjct: 91  PELLRFQ-----DRHGRDFCIGPTHEEAITDIVRHAVSSYRHLPKNLYQIQTKFRDEIRP 145

Query: 376 SLHGLMRVRGFTQDDAHVF 394
              GLMR R F   D + F
Sbjct: 146 RF-GLMRGREFIMKDGYSF 163


>gi|16078720|ref|NP_389539.1| prolyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168]
 gi|221309535|ref|ZP_03591382.1| prolyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168]
 gi|221313859|ref|ZP_03595664.1| prolyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. NCIB
           3610]
 gi|221318782|ref|ZP_03600076.1| prolyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           JH642]
 gi|221323054|ref|ZP_03604348.1| prolyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. SMY]
 gi|321315424|ref|YP_004207711.1| prolyl-tRNA synthetase [Bacillus subtilis BSn5]
 gi|11134893|sp|O31755|SYP_BACSU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|2634029|emb|CAB13530.1| prolyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168]
 gi|291484212|dbj|BAI85287.1| prolyl-tRNA synthetase [Bacillus subtilis subsp. natto BEST195]
 gi|320021698|gb|ADV96684.1| prolyl-tRNA synthetase [Bacillus subtilis BSn5]
          Length = 564

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 44/168 (26%), Positives = 78/168 (46%), Gaps = 10/168 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E + H+ L R      I ++ SGV  +    +K+ Q +   +R ++ K D  E+  P 
Sbjct: 17  DAEAKSHQLLLR---AGFIRQNTSGVYSYMPLAYKVIQNIQQIVREEMEKIDAVEMLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +     WQ+SG W +Y   +  +K      +  R FAL   +     ++    +KSY+ L
Sbjct: 74  LQQAETWQESGRWYTYGPELMRLKD-----RHGREFALGATHEEVITSLVRDEVKSYKRL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           P+ L +  S +R+E      GL+R R F   DA+ F    +  +E  +
Sbjct: 129 PLTLYQIQSKFRDEKRPRF-GLLRGREFIMKDAYSFHASAESLDETYQ 175


>gi|209545456|ref|YP_002277685.1| prolyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
 gi|209533133|gb|ACI53070.1| prolyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
          Length = 438

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 62/138 (44%), Gaps = 7/138 (5%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  +G+  W   GW++ Q +   +R +      +E+  P V    LW++SG +D+Y  
Sbjct: 32  IRQTAAGIYAWLPAGWRVLQNIARIVREEQDAIGAQELLMPTVQSAELWKRSGRYDAYGP 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  ++      +  R     P N      +F   +KSYRELP  L      +R+E    
Sbjct: 92  EMLRIQD-----RHERELLYGPTNEEMITDLFGQVVKSYRELPQVLYHIQWKFRDEVRPR 146

Query: 377 LHGLMRVRGFTQDDAHVF 394
             G+MR R F   DA+ F
Sbjct: 147 F-GVMRGREFLMKDAYSF 163


>gi|320084496|emb|CBY94289.1| Prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Weltevreden str. 2007-60-3289-1]
          Length = 572

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 7/144 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E++ P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYTWLPTGLRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELL- 94

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +  D   +  R F L P +      +  + L SY++LP+   +  + +R+E      G+
Sbjct: 95  -RFVD---RGERPFILGPTHEEVITDLVRNELSSYKQLPLNFFQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNEC 404
           MR R F   DA+ F T ++   E 
Sbjct: 150 MRSREFLMKDAYSFHTSQESLQET 173


>gi|302386566|ref|YP_003822388.1| AAA ATPase [Clostridium saccharolyticum WM1]
 gi|302197194|gb|ADL04765.1| AAA ATPase [Clostridium saccharolyticum WM1]
          Length = 553

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 43/191 (22%), Positives = 89/191 (46%), Gaps = 5/191 (2%)

Query: 11  DGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRS 69
           DG  K +P+  +  ++A+          + V++NGK+ +L   V+ + S+   T +D   
Sbjct: 7   DGVAKEYPIGTSYQEIAKEYQPRFENDILLVSVNGKLSELHKTVQFDSSLHFFTGKDQPG 66

Query: 70  LAVIRHSCAHIMAEAVQSIWPEV---QVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKM 126
           +     S   +M +A   +       +V +   +  G+Y +   +   + + L++++ +M
Sbjct: 67  IQTYHRSAIFLMMKAFYDVAGAENIEKVTVDFSLGKGYYIEAHGKVELTEELLSRVKARM 126

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGP 186
           +E +++  P +K+ +  ++A ELF  K   Y  E L        V +Y  G + D   G 
Sbjct: 127 EEYVSQKLPIMKRNVHTDEAIELFH-KHRMYDKERLFRYRRVSRVNIYSIGGFEDYYYGY 185

Query: 187 HVRSTGQVKKF 197
            V++TG +K F
Sbjct: 186 MVQNTGYIKYF 196


>gi|289207688|ref|YP_003459754.1| prolyl-tRNA synthetase [Thioalkalivibrio sp. K90mix]
 gi|288943319|gb|ADC71018.1| prolyl-tRNA synthetase [Thioalkalivibrio sp. K90mix]
          Length = 570

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 41/169 (24%), Positives = 77/169 (45%), Gaps = 8/169 (4%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           +G+  W   G ++ + + + +R ++ +    E+  P V    LWQ+SG WD Y A +  +
Sbjct: 37  AGLYTWLPLGLRVLRRVENIVREEMNRAGALEVLMPAVQPAELWQESGRWDFYGAELLRL 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           K      +  R F   P +      +    ++SYR+LPV   +  + +R+E      G+M
Sbjct: 97  KD-----RHERDFCFGPTHEEVITDLVRREIRSYRQLPVNYYQIQTKFRDERRPRF-GIM 150

Query: 382 RVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
           R R F   DA+ F    + +     ++H+    I++  G +   V+  T
Sbjct: 151 RAREFLMKDAYSFHLDADSLSRTYQQMHDAYCRIFERCGLDFRAVEADT 199


>gi|260583173|ref|ZP_05850953.1| prolyl-tRNA synthetase [Haemophilus influenzae NT127]
 gi|260093791|gb|EEW77699.1| prolyl-tRNA synthetase [Haemophilus influenzae NT127]
          Length = 572

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 46/202 (22%), Positives = 90/202 (44%), Gaps = 10/202 (4%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-K 288
           +QYL+   +    D + ++ ++ L    I    SG+  W   G ++ + +   +R ++ K
Sbjct: 4   SQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMASGLYNWLPTGIRVLKKVEKVVREEMNK 63

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
               E+  P V    LW++SG W+ Y   +   +   +     R F L P +      + 
Sbjct: 64  GGAIEVLMPVVQPAELWEESGRWEQYGPELLRFEDRGN-----RNFVLGPTHEEVITDLV 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI- 407
              + SY++LP+ L +  + +R+E      G+MR R F   DA+ F T ++   E   + 
Sbjct: 119 RREVSSYKQLPLNLYQIQTKFRDEVRPRF-GVMRSREFIMKDAYSFHTTQESLQETYDVM 177

Query: 408 HNLIISIYKDFGFEKIMVKLST 429
           + +  +I+   G +   V+  T
Sbjct: 178 YQVYSNIFNRLGLDFRAVQADT 199


>gi|238759923|ref|ZP_04621077.1| Prolyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
 gi|238701830|gb|EEP94393.1| Prolyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
          Length = 572

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 42/176 (23%), Positives = 81/176 (46%), Gaps = 9/176 (5%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           +QYL   ++    D   ++ ++ L    I +  SG+  W   G ++ + + + +R ++ +
Sbjct: 4   SQYLLSTQKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREEMNN 63

Query: 290 DYE-EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
               E++ P V    LWQ+SG W+ Y   +   +  D   +  R F L P +      + 
Sbjct: 64  AGAIEVSMPVVQPADLWQESGRWEQYGPELL--RFVD---RGERPFVLGPTHEEVITDLI 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
              + SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 119 RGEINSYKQLPLNFFQIQTKFRDEVRPRF-GVMRAREFLMKDAYSFHTTQESLQET 173


>gi|153941164|ref|YP_001389559.1| putative threonyl-tRNA synthetase/uridine kinase [Clostridium
           botulinum F str. Langeland]
 gi|152937060|gb|ABS42558.1| putative threonyl-tRNA synthetase/uridine kinase [Clostridium
           botulinum F str. Langeland]
 gi|295317656|gb|ADF98033.1| putative threonyl-tRNA synthetase/uridine kinase [Clostridium
           botulinum F str. 230613]
          Length = 552

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 85/194 (43%), Gaps = 2/194 (1%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           +KL  P+GS        T  DV +          V   I+ +  +L+  V+ EG    + 
Sbjct: 4   LKLYMPNGSNILVSGDKTLYDVVKENKLQDNIPIVLGKIDEEYYELTSTVKKEGVFIPVD 63

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
             D   L     +   I  +AV  ++PE  V I   +  G Y +  K    + +++ +I+
Sbjct: 64  ITDSMGLKTYVRTLQFIFIKAVLDLYPESTVVIEHSLGKGLYGEIHKTLSLNENDILKIK 123

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M EII +D    K  +  E+A E+F   K   KV +L  IP +E V LY     +D  
Sbjct: 124 NRMNEIINKDIKIKKISVKKERAIEIFNEYKMKDKVRLLNHIPHEE-VKLYELDGRYDYF 182

Query: 184 RGPHVRSTGQVKKF 197
            GP   STG +K F
Sbjct: 183 YGPMAYSTGAIKNF 196


>gi|254516715|ref|ZP_05128774.1| prolyl-tRNA synthetase [gamma proteobacterium NOR5-3]
 gi|219675138|gb|EED31505.1| prolyl-tRNA synthetase [gamma proteobacterium NOR5-3]
          Length = 571

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 38/161 (23%), Positives = 72/161 (44%), Gaps = 8/161 (4%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG+  W   G K+ + +   +R ++      E+  P V    LWQ+SG W+ Y   +  +
Sbjct: 37  SGLYTWMPMGLKVLRKVERVVREEMDAAGALEMAMPMVQPAELWQESGRWEQYGPELLRI 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           +   +     R F L P +      +  + + SY++LP+ L +  +  R+E      G+M
Sbjct: 97  QDRHN-----RDFCLGPTHEEVITDIVRNEISSYKQLPLNLYQIQNKVRDEIRPRF-GIM 150

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLKI-HNLIISIYKDFGFE 421
           R R F   DA+ F + +    E  ++ H     +++  G +
Sbjct: 151 RAREFLMKDAYSFHSDQASLEETYQVMHGAYSRVFERLGLD 191


>gi|194467742|ref|ZP_03073728.1| prolyl-tRNA synthetase [Lactobacillus reuteri 100-23]
 gi|194452595|gb|EDX41493.1| prolyl-tRNA synthetase [Lactobacillus reuteri 100-23]
          Length = 577

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 38/166 (22%), Positives = 82/166 (49%), Gaps = 10/166 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E   H+ + R   ++ ++   +GV  +    +++ + + + +R ++ K    E+  P 
Sbjct: 17  DAEALSHKMMIRAGYIYQVS---AGVWSYLPLAYRVIRKVENIIRDEMDKAGAVEMLMPG 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L   LW++SG ++SY  N+F +K   D     R F L P +      V    +KSY++L
Sbjct: 74  LLPADLWKESGRYESYGDNLFKLKDRRD-----RDFILGPTHEETFTEVLRDSIKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           P+ + +    +R+E     +G++R + F   D + F   ++  +E 
Sbjct: 129 PLVVYQLQDKFRDEDR-PRYGILRGKEFEMLDGYSFSADQEGLDEA 173


>gi|300173485|ref|YP_003772651.1| prolyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811]
 gi|299887864|emb|CBL91832.1| Prolyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811]
          Length = 571

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 62/129 (48%), Gaps = 8/129 (6%)

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
           D  E+  P++L   LW++SG +++Y   ++  K   D     R F L P +      + +
Sbjct: 65  DANEMLVPEILPAELWEKSGRYETYGPALYKFKNRQD-----RDFILGPTHEETFTQLMS 119

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
             +KSY++LP+ + +    +R+E      GL+R R F   DA+ F   +   ++    HN
Sbjct: 120 DDIKSYKKLPLVVYQIQPKFRDENRPRF-GLLRTREFIMKDAYSFSADQAGLDQAF--HN 176

Query: 410 LIISIYKDF 418
           +  +  K F
Sbjct: 177 METAYIKIF 185


>gi|148378199|ref|YP_001252740.1| putative threonyl-tRNA synthetase/uridine kinase [Clostridium
           botulinum A str. ATCC 3502]
 gi|148287683|emb|CAL81748.1| putative kinase [Clostridium botulinum A str. ATCC 3502]
          Length = 552

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 85/194 (43%), Gaps = 2/194 (1%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           +KL  P+GS        T  DV +          V   I+ +  +L+  V+ EG    + 
Sbjct: 4   LKLYMPNGSNILVSGDKTLYDVVKENKLQDNIPIVLGKIDEEYYELTSTVKKEGVFIPVD 63

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
             D   L     +   I  +AV  ++PE  V I   +  G Y +  K    + +++ +I+
Sbjct: 64  ITDSMGLKTYVRTLQFIFIKAVLDLYPESTVVIEHSLGKGLYGEIHKTLSLNENDILKIK 123

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M EII +D    K  +  E+A E+F   K   KV +L  IP +E V LY     +D  
Sbjct: 124 NRMNEIINKDIKIKKITVKKERAIEIFNEYKMKDKVRLLNHIPHEE-VKLYELDGRYDYF 182

Query: 184 RGPHVRSTGQVKKF 197
            GP   STG +K F
Sbjct: 183 YGPMAYSTGAIKNF 196


>gi|148543925|ref|YP_001271295.1| prolyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
 gi|184153321|ref|YP_001841662.1| prolyl-tRNA synthase [Lactobacillus reuteri JCM 1112]
 gi|227364834|ref|ZP_03848881.1| prolyl-tRNA synthetase [Lactobacillus reuteri MM2-3]
 gi|325682540|ref|ZP_08162057.1| proline--tRNA ligase [Lactobacillus reuteri MM4-1A]
 gi|166980132|sp|A5VJD4|SYP_LACRD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226701303|sp|B2G6V0|SYP_LACRJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|148530959|gb|ABQ82958.1| prolyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
 gi|183224665|dbj|BAG25182.1| prolyl-tRNA synthase [Lactobacillus reuteri JCM 1112]
 gi|227070097|gb|EEI08473.1| prolyl-tRNA synthetase [Lactobacillus reuteri MM2-3]
 gi|324978379|gb|EGC15329.1| proline--tRNA ligase [Lactobacillus reuteri MM4-1A]
          Length = 577

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 38/166 (22%), Positives = 82/166 (49%), Gaps = 10/166 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E   H+ + R   ++ ++   +GV  +    +++ + + + +R ++ K    E+  P 
Sbjct: 17  DAEALSHKMMIRAGYIYQVS---AGVWSYLPLAYRVIRKVENIIRDEMDKAGAVEMLMPG 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L   LW++SG ++SY  N+F +K   D     R F L P +      V    +KSY++L
Sbjct: 74  LLPADLWKESGRYESYGDNLFKLKDRRD-----RDFILGPTHEETFTEVLRDSIKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           P+ + +    +R+E     +G++R + F   D + F   ++  +E 
Sbjct: 129 PLVVYQLQDKFRDEDR-PRYGILRGKEFEMLDGYSFSADQEGLDEA 173


>gi|85711988|ref|ZP_01043042.1| Prolyl-tRNA synthetase [Idiomarina baltica OS145]
 gi|85694174|gb|EAQ32118.1| Prolyl-tRNA synthetase [Idiomarina baltica OS145]
          Length = 569

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 75/166 (45%), Gaps = 16/166 (9%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINT-----PQVLDQHLWQQSGHWDSYRA 316
            SG+  W   G ++ + +     R ++++ E IN      P V    LWQ+SG W+ Y  
Sbjct: 36  ASGLYTWTPTGLRVLKKV----ERVVREEMERINALEILMPMVQPADLWQESGRWEDYGP 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            +  +K   +     R F L P +      +    + SY++LP+ L +  + +R+E    
Sbjct: 92  ELLRIKDRHE-----RDFLLGPTHEEIISELVRKEVSSYKQLPLTLFQIQTKFRDEIRPR 146

Query: 377 LHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFE 421
             G+MR R F   DA+ F  T E +     ++++    I++  G +
Sbjct: 147 F-GVMRAREFMMKDAYSFHLTDESLQQAYDEMYDAYCRIFQRLGLD 191


>gi|145598925|ref|YP_001163001.1| prolyl-tRNA synthetase [Yersinia pestis Pestoides F]
 gi|166980173|sp|A4TL66|SYP_YERPP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|145210621|gb|ABP40028.1| prolyl-tRNA synthetase [Yersinia pestis Pestoides F]
          Length = 572

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 42/176 (23%), Positives = 81/176 (46%), Gaps = 9/176 (5%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           +QYL   ++    D   ++ ++ L    I +  SG+  W   G ++ + + + +R ++ +
Sbjct: 4   SQYLLSTQKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREEMNN 63

Query: 290 DYE-EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
               E++ P V    LWQ+SG W+ Y   +   +  D   +  R F L P +      + 
Sbjct: 64  AGAIEVSMPVVQPADLWQESGRWEQYGPELL--RFVD---RGERPFVLGPTHEEVITDLI 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
              + SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 119 RGEINSYKQLPLNFFQIQTKFRDEVRPRF-GVMRAREFLMKDAYSFHTTQESLQET 173


>gi|119511594|ref|ZP_01630701.1| prolyl-tRNA synthetase [Nodularia spumigena CCY9414]
 gi|119463755|gb|EAW44685.1| prolyl-tRNA synthetase [Nodularia spumigena CCY9414]
          Length = 602

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 6/152 (3%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSY- 314
           +I   GSG+  +    W++ Q +   +R ++   + +E   PQ+    LW++SG WD+Y 
Sbjct: 31  YIRRIGSGIYAYLPLMWRVLQKVSQIVREEMNATNAQECLLPQLQPAELWKESGRWDTYT 90

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
           +A        D   + L    L P +      V    ++SYR+LP+ L +  + +R+E  
Sbjct: 91  KAEGIMFSLIDRREQQL---GLGPTHEEVITTVARDMIRSYRQLPLHLYQIQTKFRDEIR 147

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
               GLMR R F   D + F   E    E  +
Sbjct: 148 PRF-GLMRGREFIMKDGYSFHVDEVSLKETYQ 178


>gi|22126985|ref|NP_670408.1| prolyl-tRNA synthetase [Yersinia pestis KIM 10]
 gi|45442549|ref|NP_994088.1| prolyl-tRNA synthetase [Yersinia pestis biovar Microtus str. 91001]
 gi|108806542|ref|YP_650458.1| prolyl-tRNA synthetase [Yersinia pestis Antiqua]
 gi|108813091|ref|YP_648858.1| prolyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|149366930|ref|ZP_01888963.1| prolyl-tRNA synthetase [Yersinia pestis CA88-4125]
 gi|162418775|ref|YP_001607747.1| prolyl-tRNA synthetase [Yersinia pestis Angola]
 gi|165927072|ref|ZP_02222904.1| prolyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165939831|ref|ZP_02228371.1| prolyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|166011913|ref|ZP_02232811.1| prolyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166211331|ref|ZP_02237366.1| prolyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167400131|ref|ZP_02305649.1| prolyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167419446|ref|ZP_02311199.1| prolyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167425324|ref|ZP_02317077.1| prolyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|167470133|ref|ZP_02334837.1| prolyl-tRNA synthetase [Yersinia pestis FV-1]
 gi|218928237|ref|YP_002346112.1| prolyl-tRNA synthetase [Yersinia pestis CO92]
 gi|229837776|ref|ZP_04457936.1| prolyl-tRNA synthetase [Yersinia pestis Pestoides A]
 gi|229840998|ref|ZP_04461157.1| prolyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229843099|ref|ZP_04463249.1| prolyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229903534|ref|ZP_04518647.1| prolyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|270487315|ref|ZP_06204389.1| proline--tRNA ligase [Yersinia pestis KIM D27]
 gi|294503084|ref|YP_003567146.1| prolyl-tRNA synthetase [Yersinia pestis Z176003]
 gi|116256081|sp|Q7CH25|SYP_YERPE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|123246276|sp|Q1CFH2|SYP_YERPN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|123372686|sp|Q1CAK9|SYP_YERPA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226701361|sp|A9R371|SYP_YERPG RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|21960030|gb|AAM86659.1|AE013912_3 proline tRNA synthetase [Yersinia pestis KIM 10]
 gi|45437414|gb|AAS62965.1| prolyl-tRNA synthetase [Yersinia pestis biovar Microtus str. 91001]
 gi|108776739|gb|ABG19258.1| prolyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|108778455|gb|ABG12513.1| prolyl-tRNA synthetase [Yersinia pestis Antiqua]
 gi|115346848|emb|CAL19734.1| prolyl-tRNA synthetase [Yersinia pestis CO92]
 gi|149290544|gb|EDM40620.1| prolyl-tRNA synthetase [Yersinia pestis CA88-4125]
 gi|162351590|gb|ABX85538.1| prolyl-tRNA synthetase [Yersinia pestis Angola]
 gi|165912234|gb|EDR30871.1| prolyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|165920968|gb|EDR38192.1| prolyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165989179|gb|EDR41480.1| prolyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166207102|gb|EDR51582.1| prolyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166962187|gb|EDR58208.1| prolyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167050839|gb|EDR62247.1| prolyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167055724|gb|EDR65508.1| prolyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|229679304|gb|EEO75407.1| prolyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|229689975|gb|EEO82034.1| prolyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229697364|gb|EEO87411.1| prolyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229704153|gb|EEO91165.1| prolyl-tRNA synthetase [Yersinia pestis Pestoides A]
 gi|262361122|gb|ACY57843.1| prolyl-tRNA synthetase [Yersinia pestis D106004]
 gi|262365363|gb|ACY61920.1| prolyl-tRNA synthetase [Yersinia pestis D182038]
 gi|270335819|gb|EFA46596.1| proline--tRNA ligase [Yersinia pestis KIM D27]
 gi|294353543|gb|ADE63884.1| prolyl-tRNA synthetase [Yersinia pestis Z176003]
 gi|320014203|gb|ADV97774.1| prolyl-tRNA synthetase [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 572

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 42/176 (23%), Positives = 81/176 (46%), Gaps = 9/176 (5%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           +QYL   ++    D   ++ ++ L    I +  SG+  W   G ++ + + + +R ++ +
Sbjct: 4   SQYLLSTQKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREEMNN 63

Query: 290 DYE-EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
               E++ P V    LWQ+SG W+ Y   +   +  D   +  R F L P +      + 
Sbjct: 64  AGAIEVSMPVVQPADLWQESGRWEQYGPELL--RFVD---RGERPFVLGPTHEEVITDLI 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
              + SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 119 RGEINSYKQLPLNFFQIQTKFRDEVRPRF-GVMRAREFLMKDAYSFHTTQESLQET 173


>gi|327462766|gb|EGF09088.1| proline--tRNA ligase [Streptococcus sanguinis SK1057]
          Length = 616

 Score = 57.4 bits (137), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 64/121 (52%), Gaps = 11/121 (9%)

Query: 279 LISYMRRKIKDDYEEINT-----PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           +I   +R +++++++I       P +L   LW++SG +++Y  +++ +K      ++   
Sbjct: 49  VIEKAKRIMREEFDKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKN-----REKSD 103

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
           F L P +     A+    +KSY++LP+ L +    YR+E     +GL+R R F   DA+ 
Sbjct: 104 FILGPTHEETFTAIVRDSVKSYKQLPLNLYQIQPKYRDEKR-PRNGLLRTREFIMKDAYS 162

Query: 394 F 394
           F
Sbjct: 163 F 163


>gi|199597103|ref|ZP_03210535.1| prolyl-tRNA synthetase [Lactobacillus rhamnosus HN001]
 gi|258508613|ref|YP_003171364.1| prolyl-tRNA synthetase [Lactobacillus rhamnosus GG]
 gi|199591907|gb|EDY99981.1| prolyl-tRNA synthetase [Lactobacillus rhamnosus HN001]
 gi|257148540|emb|CAR87513.1| Prolyl-tRNA synthetase [Lactobacillus rhamnosus GG]
 gi|259649920|dbj|BAI42082.1| prolyl-tRNA synthetase [Lactobacillus rhamnosus GG]
          Length = 576

 Score = 57.4 bits (137), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 57/112 (50%), Gaps = 6/112 (5%)

Query: 288 KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
           K D  ++  P +L   LW++SG +++Y  N+F +K   D     R   L P +      +
Sbjct: 63  KIDAVKMKMPALLPAELWEESGRYETYGPNLFKLKNRQD-----RKMILGPTHEETFTDL 117

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQ 399
             + LKSY+ +P+ L +    +R+E     +G++R R F   DA+ F + +Q
Sbjct: 118 VRNELKSYKRMPLVLYQIQDKFRDEDR-PRYGVLRGREFIMQDAYSFTSNDQ 168


>gi|170755409|ref|YP_001779823.1| putative threonyl-tRNA synthetase/uridine kinase [Clostridium
           botulinum B1 str. Okra]
 gi|169120621|gb|ACA44457.1| putative threonyl-tRNA synthetase/uridine kinase [Clostridium
           botulinum B1 str. Okra]
          Length = 552

 Score = 57.4 bits (137), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 85/194 (43%), Gaps = 2/194 (1%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           +KL  P+GS        T  DV +          V   I+ +  +L+  V+ EG    + 
Sbjct: 4   LKLYMPNGSNILVSGDKTLYDVVKENKLQDNIPIVLGKIDEEYYELTSTVKKEGVFIPVD 63

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
             D   L     +   I  +AV  ++PE  V I   +  G Y +  K    + +++ +I+
Sbjct: 64  ITDSMGLKTYVRTLQFIFIKAVLDLYPESTVVIEHSLGKGLYGEIHKTLSLNENDILKIK 123

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M EII +D    K  +  E+A E+F   K   KV +L  IP +E V LY     +D  
Sbjct: 124 NRMNEIINKDIKIKKISVKKERAIEIFNEYKMKDKVRLLNHIPHEE-VKLYELDGRYDYF 182

Query: 184 RGPHVRSTGQVKKF 197
            GP   STG +K F
Sbjct: 183 YGPMAYSTGAIKNF 196


>gi|11499201|ref|NP_070438.1| prolyl-tRNA synthetase [Archaeoglobus fulgidus DSM 4304]
 gi|2648947|gb|AAB89637.1| prolyl-tRNA synthetase (proS) [Archaeoglobus fulgidus DSM 4304]
          Length = 575

 Score = 57.4 bits (137), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 81/374 (21%), Positives = 157/374 (41%), Gaps = 60/374 (16%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVL-DQHLWQQSGHWDSYRANMFAVK 322
           G+  W   G+KI Q + S +R  +  +++E+  P ++ +  L ++  H   +   ++ + 
Sbjct: 135 GLYVWFPFGFKIRQLVYSKLREIMDREHDEVYFPALIPETELGKEGEHIKGFEDEVYWIT 194

Query: 323 CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMR 382
               T  D++  AL+P +      +F   ++++ +LP+++ +  + +R E   +   L+R
Sbjct: 195 HGGLTPLDVK-LALRPTSETAMYPMFRLWVRNHADLPLKVYQIVNTFRYETKHT-RPLIR 252

Query: 383 VRGFTQ-DDAHVFCTKEQMFNECLKIHNLIISIYKDF-GFEKIMVKLSTRPEKRVGSDAL 440
           +R  T   +AH   T  + F E  +     I  YK+F  F  I   +  RPE        
Sbjct: 253 LREITSFKEAH---TVHKDFEEAAEHVKKAIGFYKEFYDFLAIPYMVIRRPE-------- 301

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI-QVD 499
           WD                             GA Y   F+ I+ D  GR  Q GT+  + 
Sbjct: 302 WDKF--------------------------PGAAYTIAFDTIMPD--GRTLQIGTVHHLA 333

Query: 500 FNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQA 555
            N    F+  Y   + E  +    H+  +G  ER I  +I    ++    LP  ++P+Q 
Sbjct: 334 DNFARTFDIKYEAPNGEHYYA---HQTCYGISERCIAALISVHGDDLGLVLPFEVAPVQI 390

Query: 556 IVTTIT-----SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           ++  I       + +E  +++A  LK+  + +  D   +    K  +  +K +PI    G
Sbjct: 391 VIIPILYKGKEEAVMEACRKLAEKLKAFRVVL--DEGEDRPGAKYYKWELKGVPIRFEIG 448

Query: 611 DKEASERSIGIRRF 624
            ++A E+ + +  F
Sbjct: 449 PRDA-EKGVAVVSF 461


>gi|327488783|gb|EGF20582.1| proline--tRNA ligase [Streptococcus sanguinis SK1058]
          Length = 616

 Score = 57.4 bits (137), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 64/121 (52%), Gaps = 11/121 (9%)

Query: 279 LISYMRRKIKDDYEEINT-----PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           +I   +R +++++++I       P +L   LW++SG +++Y  +++ +K      ++   
Sbjct: 49  VIEKAKRIMREEFDKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKN-----REKSD 103

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
           F L P +     A+    +KSY++LP+ L +    YR+E     +GL+R R F   DA+ 
Sbjct: 104 FILGPTHEETFTAIVRDSVKSYKQLPLNLYQIQPKYRDEKR-PRNGLLRTREFIMKDAYS 162

Query: 394 F 394
           F
Sbjct: 163 F 163


>gi|255020885|ref|ZP_05292941.1| Prolyl-tRNA synthetase [Acidithiobacillus caldus ATCC 51756]
 gi|254969676|gb|EET27182.1| Prolyl-tRNA synthetase [Acidithiobacillus caldus ATCC 51756]
          Length = 572

 Score = 57.4 bits (137), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 84/184 (45%), Gaps = 11/184 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+E   H+ L R   +  +A   SG+  W   G ++ + +   +R ++ +   +EI    
Sbjct: 17  EAELVSHQLLLRGGFIRRLA---SGLYTWLPLGLRVLRRVEQVVREEMDRSGAQEILMTV 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    LWQ+SG W+ Y   +  +K      +  R F L P +      +    ++SYR+L
Sbjct: 74  VQPAELWQESGRWELYGPELLRLK-----DRHQRDFCLGPTHEEVISDLARREIRSYRQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKD 417
           PV L +  + +R+E      GLMR R F   DA+ F   +    E  + +++    +++ 
Sbjct: 129 PVNLYQIQTKFRDEIRPRF-GLMRAREFIMKDAYSFHMDQASLEEGYRAMYDAYCRVFQR 187

Query: 418 FGFE 421
            G +
Sbjct: 188 LGLD 191


>gi|27379988|ref|NP_771517.1| prolyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110]
 gi|81841648|sp|Q89KM8|SYP_BRAJA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|27353142|dbj|BAC50142.1| prolyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110]
          Length = 439

 Score = 57.4 bits (137), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 95/461 (20%), Positives = 183/461 (39%), Gaps = 95/461 (20%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTP 297
           +E+E   HR + R      I ++ +G+  W   G+++ + +   +R  + +    E+  P
Sbjct: 16  KEAEIVSHRLMLRAG---MIRQEAAGIYAWLPLGFRVLKKIEQIVREEQDRSGALELLMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW++SG +D+Y   M  ++ AD   +  R     P N      +F   +KSY+ 
Sbjct: 73  TLQLADLWRESGRYDAYGPEM--LRIAD---RHKRELLYGPTNEEMITEIFRAYVKSYKN 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYK 416
           LP+ L      +R+E      G+MR R F   DA+ F   E        K+    +  + 
Sbjct: 128 LPLNLYHIQWKFRDEQRPRF-GVMRGREFLMKDAYSFDLNEAAARVAYNKMFVAYLRTFA 186

Query: 417 DFGFEKIMVKLSTRPEKRVGSD------ALWDDAEN---IMKGVLD-------------- 453
             G + I ++  T P   +G D       L +  E+   I + VLD              
Sbjct: 187 RMGLKAIPMRAETGP---IGGDLSHEFIVLAETGESGVFINRDVLDLPVPGEDVDYESDL 243

Query: 454 --------TIKNSSQD---------------RINT-GVLLGEGAFYGPKFEYILKDAIGR 489
                   ++  +++D               R+NT G+ +G+  ++G K+   +K  +  
Sbjct: 244 TPIIKQWTSVYAATEDVHDAARFEQEVPEAKRLNTRGIEVGQIFYFGTKYSEPMKAMV-- 301

Query: 490 DWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG-SIERFIGIMIENFKGNL-- 546
               G   VD                     V IH   +G  + R +G +IE    +   
Sbjct: 302 ---AGPDGVD---------------------VPIHGGSYGVGVSRLLGAIIEACHDDAGI 337

Query: 547 --PLWLSPIQAIVTTITS--SAVEYA-QEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             P  ++P +A+V  +    +AV+ A +++   L++  + +  D  ++    K     + 
Sbjct: 338 KWPEAVAPFRAVVLNLKQGDAAVDAACEKLYAELQAKGVDVLYDDTDQRAGAKFAAADLI 397

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            IP  I+ G K  ++  + ++R    + + +S  DA+  L 
Sbjct: 398 GIPWQIMIGPKGLADGKVELKRRSDGSRETMSPADAVARLV 438


>gi|313672947|ref|YP_004051058.1| prolyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM 19672]
 gi|312939703|gb|ADR18895.1| prolyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM 19672]
          Length = 572

 Score = 57.4 bits (137), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 75/156 (48%), Gaps = 10/156 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQ 298
           ++E   H+ + R   +  +A   +G+  +   G ++ + + + +R+ + +    EI  P 
Sbjct: 17  DAEVVSHKLMVRAGMIRKVA---AGIYNYLPMGLRVIRKVENIIRKYMNEAGAIEILMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+   LW++SG W+ Y   +   K   D     R F + P +      +  + +KSY++L
Sbjct: 74  VVPAELWKESGRWNVYGKELLRFKDRHD-----RDFCMGPTHEEVVTDIVRNEIKSYKDL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           PV L +  + +R+E      GLMR R F   DA+ F
Sbjct: 129 PVNLYQIQTKFRDEVRPRF-GLMRGREFIMKDAYSF 163


>gi|304319826|ref|YP_003853469.1| prolyl-tRNA synthetase [Parvularcula bermudensis HTCC2503]
 gi|303298729|gb|ADM08328.1| prolyl-tRNA synthetase [Parvularcula bermudensis HTCC2503]
          Length = 446

 Score = 57.4 bits (137), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 84/204 (41%), Gaps = 15/204 (7%)

Query: 234 YLYFLEESEKR----DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIK 288
           YL  L+E+        HR + R      + +  +G+  W   G K+ + + + +R  + +
Sbjct: 7   YLPLLKETPAEAVIASHRLMLRSG---MVRQQAAGIYAWLPLGLKVLKKVEAIVREEQER 63

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
               E+  P +    LW QSG +D+Y   M  +K      +  R     P N      + 
Sbjct: 64  AGVAELLMPTIQPASLWHQSGRYDAYGPEMLRLKD-----RHGRDMLYGPTNEEMITELV 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKI 407
             G+KSY+ELP  L      +R+E      G+MR R F   DA+ F  + E      L+ 
Sbjct: 119 RAGIKSYKELPKTLFHIQWKFRDEVRPRF-GVMRGREFLMKDAYSFDLSPEAARRSYLRF 177

Query: 408 HNLIISIYKDFGFEKIMVKLSTRP 431
               +  +   G + I V+  T P
Sbjct: 178 FAAYLRTFARLGVKAIPVRADTGP 201


>gi|315302972|ref|ZP_07873693.1| prolyl-tRNA synthetase [Listeria ivanovii FSL F6-596]
 gi|313628661|gb|EFR97073.1| prolyl-tRNA synthetase [Listeria ivanovii FSL F6-596]
          Length = 538

 Score = 57.4 bits (137), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 59/130 (45%), Gaps = 7/130 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +    LWQ+SG W  Y   +  +K      +  R FAL P +     A+    +
Sbjct: 68  ELLMPALQPAELWQESGRWSDYGPELMRLKD-----RAARDFALGPTHEEVITALLRDEI 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI-HNLI 411
           KSY+ LP+ L +  + +R+E      GL+R R F   DA+ F    +  +E   + H   
Sbjct: 123 KSYKRLPLTLYQIQTKFRDEKRPRF-GLLRGREFIMKDAYSFHASNESLDEVYDLMHQAY 181

Query: 412 ISIYKDFGFE 421
            +I+   G E
Sbjct: 182 SNIFSRCGLE 191


>gi|312864390|ref|ZP_07724623.1| proline--tRNA ligase [Streptococcus downei F0415]
 gi|311100111|gb|EFQ58322.1| proline--tRNA ligase [Streptococcus downei F0415]
          Length = 633

 Score = 57.4 bits (137), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 31/116 (26%), Positives = 58/116 (50%), Gaps = 6/116 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  +++ +K      +D   F L P +     A+    +
Sbjct: 82  EMLAPALLTADLWKESGRYETYGDDLYKLKN-----RDQAEFILGPTHEETFTALVRDSI 136

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
           KSY++LP+ L +  + YR+E     +GL+R R F   D + F       +E  + +
Sbjct: 137 KSYKQLPMNLYQIQAKYRDEKR-PRNGLLRTREFIMKDGYSFHANYDSLDEAYEAY 191


>gi|227544954|ref|ZP_03975003.1| prolyl-tRNA synthetase [Lactobacillus reuteri CF48-3A]
 gi|300910015|ref|ZP_07127475.1| proline--tRNA ligase [Lactobacillus reuteri SD2112]
 gi|227185065|gb|EEI65136.1| prolyl-tRNA synthetase [Lactobacillus reuteri CF48-3A]
 gi|300892663|gb|EFK86023.1| proline--tRNA ligase [Lactobacillus reuteri SD2112]
          Length = 577

 Score = 57.4 bits (137), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 38/166 (22%), Positives = 82/166 (49%), Gaps = 10/166 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E   H+ + R   ++ ++   +GV  +    +++ + + + +R ++ K    E+  P 
Sbjct: 17  DAEALSHKMMIRAGYIYQVS---AGVWSYLPLAYRVIRKVENIIRDEMDKAGAVEMLMPG 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L   LW++SG ++SY  N+F +K   D     R F L P +      V    +KSY++L
Sbjct: 74  LLPADLWKESGRYESYGDNLFKLKDRRD-----RDFILGPTHEETFTEVLRDSIKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           P+ + +    +R+E     +G++R + F   D + F   ++  +E 
Sbjct: 129 PLVVYQLQDKFRDEDR-PRYGILRGKEFEMLDGYSFSADQEGLDEA 173


>gi|226947417|ref|YP_002802508.1| putative threonyl-tRNA synthetase/uridine kinase [Clostridium
           botulinum A2 str. Kyoto]
 gi|226842311|gb|ACO84977.1| putative threonyl-tRNA synthetase/uridine kinase [Clostridium
           botulinum A2 str. Kyoto]
          Length = 552

 Score = 57.4 bits (137), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 85/194 (43%), Gaps = 2/194 (1%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           +KL  P+GS        T  DV +          V   I+ +  +L+  V+ EG    + 
Sbjct: 4   LKLYMPNGSNILVSGDKTLYDVVKENKLQDNIPIVLGKIDEEYYELTSTVKKEGVFIPVD 63

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
             D   L     +   I  +AV  ++PE  V I   +  G Y +  K    + +++ +I+
Sbjct: 64  ITDSMGLKTYVRTLQFIFIKAVLDLYPESTVVIEHSLGKGLYGEIHKTLSLNENDILKIK 123

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M EII +D    K  +  E+A E+F   K   KV +L  IP +E V LY     +D  
Sbjct: 124 NRMNEIINKDIKIKKISVKKERAIEIFNEYKMKDKVRLLNHIPHEE-VKLYELDGRYDYF 182

Query: 184 RGPHVRSTGQVKKF 197
            GP   STG +K F
Sbjct: 183 YGPMAYSTGAIKNF 196


>gi|153947724|ref|YP_001400022.1| prolyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
 gi|170023340|ref|YP_001719845.1| prolyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
 gi|166980172|sp|A7FFJ4|SYP_YERP3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226701362|sp|B1JQI5|SYP_YERPY RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|152959219|gb|ABS46680.1| prolyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
 gi|169749874|gb|ACA67392.1| prolyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
          Length = 572

 Score = 57.4 bits (137), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 42/176 (23%), Positives = 81/176 (46%), Gaps = 9/176 (5%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           +QYL   ++    D   ++ ++ L    I +  SG+  W   G ++ + + + +R ++ +
Sbjct: 4   SQYLLSTQKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREEMNN 63

Query: 290 DYE-EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
               E++ P V    LWQ+SG W+ Y   +   +  D   +  R F L P +      + 
Sbjct: 64  AGAIEVSMPVVQPADLWQESGRWEQYGPELL--RFVD---RGERPFVLGPTHEEVITDLI 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
              + SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 119 RGEINSYKQLPLNFFQIQTKFRDEVRPRF-GVMRAREFLMKDAYSFHTTQESLQET 173


>gi|125718857|ref|YP_001035990.1| prolyl-tRNA synthetase [Streptococcus sanguinis SK36]
 gi|152112958|sp|A3CQI5|SYP_STRSV RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|125498774|gb|ABN45440.1| Prolyl-tRNA synthetase, putative [Streptococcus sanguinis SK36]
          Length = 616

 Score = 57.4 bits (137), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 64/121 (52%), Gaps = 11/121 (9%)

Query: 279 LISYMRRKIKDDYEEINT-----PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           +I   +R +++++++I       P +L   LW++SG +++Y  +++ +K      ++   
Sbjct: 49  VIEKAKRIMREEFDKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKN-----REKSD 103

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
           F L P +     A+    +KSY++LP+ L +    YR+E     +GL+R R F   DA+ 
Sbjct: 104 FILGPTHEETFTAIVRDSVKSYKQLPLNLYQIQPKYRDEKR-PRNGLLRTREFIMKDAYS 162

Query: 394 F 394
           F
Sbjct: 163 F 163


>gi|28212194|ref|NP_783138.1| prolyl-tRNA synthetase [Clostridium tetani E88]
 gi|81841121|sp|Q890M2|SYP_CLOTE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|28204638|gb|AAO37075.1| prolyl-tRNA synthetase [Clostridium tetani E88]
          Length = 570

 Score = 57.4 bits (137), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 41/156 (26%), Positives = 75/156 (48%), Gaps = 10/156 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E   H+ + R   +  +A   SGV  +   G ++ + +   +R ++ +   +E     
Sbjct: 17  EAEIPSHKLMLRAGMMRKMA---SGVYNFMPFGLRVIKKIEDIVREEMDNAGAQEFLASA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L   LW++SG WD +   MF ++  ++     R F L P +      +  + + SY++L
Sbjct: 74  LLPSELWKESGRWDVFGPEMFRLQDRNN-----REFCLGPTHEEVFTDIARNEINSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           P+ L +  + YR+E      GLMR R F   DA+ F
Sbjct: 129 PLNLYQIQTKYRDERRPRF-GLMRSREFIMKDAYSF 163


>gi|330997135|ref|ZP_08320988.1| phosphoribulokinase/uridine kinase family protein [Paraprevotella
           xylaniphila YIT 11841]
 gi|329570930|gb|EGG52637.1| phosphoribulokinase/uridine kinase family protein [Paraprevotella
           xylaniphila YIT 11841]
          Length = 553

 Score = 57.4 bits (137), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 44/183 (24%), Positives = 80/183 (43%), Gaps = 2/183 (1%)

Query: 16  NFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIR 74
             P+ +T  D   +++  +    V+  +N KV  L      +  +E +       +    
Sbjct: 17  QLPIGSTLWDAYHALNLQMPYGPVSAKVNNKVEGLHYRFYNDKDVEFLDVTSSSGMRTYT 76

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDS 134
            S   ++ +AV+ ++P   + I   +  G+Y D    +P   D++  I ++M+EI+  D 
Sbjct: 77  RSLFFVLVKAVKDLFPGCVLRIETPVSRGYYCDLRIGRPIEEDDVTAIWRRMREIVDADI 136

Query: 135 PFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQV 194
           PF +     E A E+F  +    KV +LES  A      Y+  +  D   G  + STG +
Sbjct: 137 PFHRIQSPTEDAIEMFRRQGMTSKVRLLESYGAI-YTHYYQLDQTVDYFYGSLLTSTGGL 195

Query: 195 KKF 197
           K F
Sbjct: 196 KVF 198


>gi|328479646|gb|EGF48826.1| threonyl-tRNA synthetase [Lactobacillus rhamnosus MTCC 5462]
          Length = 101

 Score = 57.4 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 23/67 (34%), Positives = 42/67 (62%)

Query: 565 VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRF 624
           ++Y   I   +++  L ++ D RNE + YKIRE   KK+P  ++ GDKE ++ ++ +RR+
Sbjct: 1   LDYVNRIKRQMQAAGLRVKVDDRNEKMGYKIREAQTKKVPYTVVVGDKELNDAAVSVRRY 60

Query: 625 GSTTTQK 631
           G   T++
Sbjct: 61  GDEHTEE 67


>gi|327441016|dbj|BAK17381.1| prolyl-tRNA synthetase [Solibacillus silvestris StLB046]
          Length = 568

 Score = 57.4 bits (137), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 81/168 (48%), Gaps = 18/168 (10%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINT--- 296
           +++ + HR L R      I ++ +GV  +      + + ++S + + I+++ E IN+   
Sbjct: 17  DADVKSHRMLLRAG---FIRQNAAGVYSY----LPLARRVLSKIEQIIREEMEAINSIEL 69

Query: 297 --PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
             P +    LWQ+SG W++Y   +  +K   D     R FAL   +      +    +KS
Sbjct: 70  LMPALQPAELWQESGRWEAYGPELMRLKDRHD-----RDFALGATHEEVITTLVRDEIKS 124

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN 402
           Y++LP+ L +  S +R+E      GL+R R F   DA+ F +  +  +
Sbjct: 125 YKKLPLTLYQIQSKFRDEKRPRF-GLLRGREFIMKDAYSFHSSRESLD 171


>gi|229845777|ref|ZP_04465889.1| prolyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
 gi|229810781|gb|EEP46498.1| prolyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
          Length = 572

 Score = 57.4 bits (137), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 46/202 (22%), Positives = 89/202 (44%), Gaps = 10/202 (4%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-K 288
           +QYL+   +    D + ++ ++ L    I    SG+  W   G ++ + +   +R ++ K
Sbjct: 4   SQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMASGLYNWLPTGIRVLKKVEKVVREEMNK 63

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
               E+  P V    LW++SG WD Y   +   +   +     R F L P +      + 
Sbjct: 64  GGAIEVLMPVVQPAELWEESGRWDQYGPELLRFEDRGN-----RNFVLGPTHEEVITDLV 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI- 407
              + SY++LP+ L +  + +R+E      G+MR R F   DA+ F T ++       + 
Sbjct: 119 RREVSSYKQLPLNLYQIQTKFRDEVRPRF-GVMRSREFIMKDAYSFHTTQESLQATYDVM 177

Query: 408 HNLIISIYKDFGFEKIMVKLST 429
           + +  +I+   G +   V+  T
Sbjct: 178 YQVYSNIFNRLGLDFRAVQADT 199


>gi|75908528|ref|YP_322824.1| prolyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
 gi|114152169|sp|Q3MAQ7|SYP_ANAVT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|75702253|gb|ABA21929.1| Prolyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
          Length = 604

 Score = 57.4 bits (137), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 9/161 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R     +I   GSG+  +    W++ Q +   +R ++     +E   PQ
Sbjct: 17  DAEIPSHKLLLRAG---YIRRIGSGIYAYLPLMWRVLQKVSQIVREEMNAAGAQECLLPQ 73

Query: 299 VLDQHLWQQSGHWDSY-RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           +    LW++SG WD+Y +A        D   + L    L P +     A+    ++SYR+
Sbjct: 74  LQPSELWKESGRWDTYTKAEGIMFSLIDRREQQL---GLGPTHEEVITAIARDMIRSYRQ 130

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE 398
           LP+ L +  + +R+E      GLMR R F   D + F   E
Sbjct: 131 LPLHLYQLQTKFRDEIRPRF-GLMRGREFIMKDGYSFHVDE 170


>gi|313836817|gb|EFS74531.1| prolyl-tRNA synthetase [Propionibacterium acnes HL037PA2]
 gi|314929774|gb|EFS93605.1| prolyl-tRNA synthetase [Propionibacterium acnes HL044PA1]
 gi|314972203|gb|EFT16300.1| prolyl-tRNA synthetase [Propionibacterium acnes HL037PA3]
          Length = 581

 Score = 57.4 bits (137), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 47/198 (23%), Positives = 93/198 (46%), Gaps = 19/198 (9%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   HR L R   +  +A    GV  W   G ++ + + +  R ++     +E++ P 
Sbjct: 15  DAEVPSHRWLVRAGYIRRVA---PGVYSWLPLGLRVLRRIEAICREEMAGIGAQEVSFPA 71

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L    ++++G W  Y  N+F        +KD +   +  +  P H  +F   +K    S
Sbjct: 72  LLASDPYKETGRWAEYGDNLF-------RLKDRKGVDM--LLGPTHEEMFTLMVKDLYSS 122

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH-NLIIS 413
           Y++LP+ L +  + YR+E +    G++R R F   DA+ F   ++  ++  +   +  I 
Sbjct: 123 YKDLPLCLYQIQNKYRDE-ARPRAGILRGREFVMMDAYSFDVAQEGLDDAYQAQRDAYIR 181

Query: 414 IYKDFGFEKIMVKLSTRP 431
           I+   GF+  +VK  + P
Sbjct: 182 IFNRLGFDYAIVKAMSGP 199


>gi|147677598|ref|YP_001211813.1| prolyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
 gi|189083504|sp|A5D2U6|SYP_PELTS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|146273695|dbj|BAF59444.1| prolyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
          Length = 570

 Score = 57.4 bits (137), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 82/183 (44%), Gaps = 11/183 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+E   H+ L R      I    +GV  +     ++ + +   +R ++ +   +E+  P 
Sbjct: 17  EAEVVSHQLLLRA---GFIRRAAAGVYTYLPLAMRVIKKIEQIVREEMDRQGGQELLMPI 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    +WQ+SG WD Y   +F +K   D     R FAL P +      +    + SY++L
Sbjct: 74  IQPAEIWQESGRWDVYGPELFRLKDRHD-----RDFALGPTHEEIITVLVRGEVSSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN-ECLKIHNLIISIYKD 417
           P+ L +  + YR+E      GLMR R F   D + F   E+  N   +K++     +++ 
Sbjct: 129 PLLLYQIQNKYRDERRPRF-GLMRGREFIMKDLYSFDRDEEGLNVSYMKMYEAYTRVFQR 187

Query: 418 FGF 420
            G 
Sbjct: 188 CGL 190


>gi|328907631|gb|EGG27395.1| proline--tRNA ligase [Propionibacterium sp. P08]
          Length = 585

 Score = 57.4 bits (137), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 47/198 (23%), Positives = 93/198 (46%), Gaps = 19/198 (9%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   HR L R   +  +A    GV  W   G ++ + + +  R ++     +E++ P 
Sbjct: 19  DAEVPSHRWLVRAGYIRRVA---PGVYSWLPLGLRVLRRIEAICREEMAGIGAQEVSFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L    ++++G W  Y  N+F        +KD +   +  +  P H  +F   +K    S
Sbjct: 76  LLASDPYKETGRWAEYGDNLF-------RLKDRKGVDM--LLGPTHEEMFTLMVKDLYSS 126

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH-NLIIS 413
           Y++LP+ L +  + YR+E +    G++R R F   DA+ F   ++  ++  +   +  I 
Sbjct: 127 YKDLPLCLYQIQNKYRDE-ARPRAGILRGREFVMMDAYSFDVAQEGLDDAYQAQRDAYIR 185

Query: 414 IYKDFGFEKIMVKLSTRP 431
           I+   GF+  +VK  + P
Sbjct: 186 IFNRLGFDYAIVKAMSGP 203


>gi|329117585|ref|ZP_08246302.1| proline--tRNA ligase [Streptococcus parauberis NCFD 2020]
 gi|326907990|gb|EGE54904.1| proline--tRNA ligase [Streptococcus parauberis NCFD 2020]
          Length = 618

 Score = 57.4 bits (137), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+ +P +L   LW++SG +++Y  +++ +K      +D   F L P +      +    +
Sbjct: 68  EMLSPALLTADLWRESGRYETYGDDLYKLKN-----RDQSDFILGPTHEETFTTLVRDAV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +  S YR+E     +GL+R R F   D + F
Sbjct: 123 KSYKQLPLNLYQIQSKYRDEKR-PRNGLLRTREFIMKDGYSF 163



 Score = 40.4 bits (93), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 70/144 (48%), Gaps = 18/144 (12%)

Query: 518 CHPVMIHRAVFGSIERFIGIMIENF-KG--------NLPLWLSPIQAIVTTITSSAVEYA 568
           C+ + + R +   IE+   + +    KG        N P  L+P    + T+ +   E A
Sbjct: 477 CYGIGVSRILSAVIEQHARLFVSKTPKGDYRFAWGINFPKELAPFDVHLITVNTKDQE-A 535

Query: 569 QEIANLLKSHHLS----IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRF 624
           QE+ N +++  ++    + TD RNE +  K  +  +  +PI +  G K+ASE  + I+  
Sbjct: 536 QELTNRIETDLMAKGYEVLTDDRNERVGSKFSDSDLIGLPIRVTVG-KKASEGIVEIKIK 594

Query: 625 GSTTTQKV---SLLDAIPILTKES 645
            S  + +V   +L + + ILTKE+
Sbjct: 595 SSGASIEVNAENLTETLEILTKEN 618


>gi|308173620|ref|YP_003920325.1| prolyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|307606484|emb|CBI42855.1| prolyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|328553448|gb|AEB23940.1| prolyl-tRNA synthetase [Bacillus amyloliquefaciens TA208]
 gi|328911761|gb|AEB63357.1| prolyl-tRNA synthetase [Bacillus amyloliquefaciens LL3]
          Length = 564

 Score = 57.4 bits (137), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 79/170 (46%), Gaps = 18/170 (10%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINT--- 296
           ++E + H+ L R      I ++ SGV  +    +++ Q +    ++ ++++ E+IN    
Sbjct: 17  DAEAKSHKLLLR---AGFIRQNTSGVYSYMPLAYRVIQNI----QKIVREEMEKINAVEM 69

Query: 297 --PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
             P +     WQ+SG W +Y   +  +K      +  R FAL   +     ++    +KS
Sbjct: 70  LMPALQQAETWQESGRWYTYGPELMRLKD-----RHGREFALGATHEEVITSLVRDEVKS 124

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           Y+ LP+ L +  S +R+E      GL+R R F   DA+ F   E+   E 
Sbjct: 125 YKRLPLTLYQIQSKFRDEKRPRF-GLLRGREFIMKDAYSFHASEESLEET 173


>gi|229592381|ref|YP_002874500.1| prolyl-tRNA synthetase [Pseudomonas fluorescens SBW25]
 gi|229364247|emb|CAY51951.1| proline tRNA synthetase [Pseudomonas fluorescens SBW25]
          Length = 596

 Score = 57.4 bits (137), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 48/214 (22%), Positives = 92/214 (42%), Gaps = 13/214 (6%)

Query: 215 PMLSRIYGTAWNTQQ---ELTQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWH 269
           P+ S++  +  N Q+     +QYL   ++    D   ++ ++ L    I +  SG+  W 
Sbjct: 9   PVQSQVISSPSNRQRPTMRTSQYLLATQKETPSDAVVISHQLMLRAGMIRKLASGLYTWL 68

Query: 270 RKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTI 328
             G K+ + + + +R ++      E+  P      LWQ+SG W+ Y   +   K      
Sbjct: 69  PMGLKVMRKVEAIVREEMNAAGSLEVLMPSTQPAELWQESGRWEEYGPELLRFKD----- 123

Query: 329 KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQ 388
           +  R F   P +      +  + L SY++LP+ L +  + +R+E      GLMR R F  
Sbjct: 124 RHGRDFCAGPTHEEVITDLMRNELSSYKQLPLNLYQIQTKFRDEIRPRF-GLMRGREFIM 182

Query: 389 DDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFE 421
            DA+ F   +        ++H    +++   G +
Sbjct: 183 KDAYSFHADQASLQVTYDRMHQAYCNVFTRLGLK 216


>gi|167035206|ref|YP_001670437.1| prolyl-tRNA synthetase [Pseudomonas putida GB-1]
 gi|189083507|sp|B0KTK4|SYP_PSEPG RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|166861694|gb|ABZ00102.1| prolyl-tRNA synthetase [Pseudomonas putida GB-1]
          Length = 571

 Score = 57.4 bits (137), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 43/194 (22%), Positives = 87/194 (44%), Gaps = 10/194 (5%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           +QYL   ++    D   ++ ++ L    I +  SG+  W   G ++ + + + +R ++  
Sbjct: 4   SQYLLATQKETPADAVVISHQLMLRAGMIRKLASGLYTWLPMGLRVMRKVEAVVREEMNA 63

Query: 290 DYE-EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
               E+  P +    LWQ+SG W+ Y   +  +K      +  R F + P +      + 
Sbjct: 64  AGALEVLMPSIQPAELWQESGRWEQYGPELLRLKD-----RHQRDFCVGPTHEEVITDLA 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KI 407
            + L SY++LP+ + +  + +R+E      GLMR R F   DA+ F   +    E   ++
Sbjct: 119 RNELSSYKQLPLNMYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSFHADQASLQETYDRM 177

Query: 408 HNLIISIYKDFGFE 421
           H    +++   G +
Sbjct: 178 HQAYSNVFTRLGLD 191


>gi|332184487|gb|AEE26741.1| Prolyl-tRNA synthetase Bacterial type [Francisella cf. novicida
           3523]
          Length = 565

 Score = 57.4 bits (137), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 81/174 (46%), Gaps = 15/174 (8%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G K+ Q +   +R ++ K    E+  P +L   L Q++  WD +   +  
Sbjct: 36  ASGIYTWMPLGLKVLQKIQDIVRDEMNKAGASELLLPSILPSELLQETHRWDKFGPELLK 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           ++   +     R F   P +    V +    +KSY++LP+ L +  + +R+E      G+
Sbjct: 96  LRDRHN-----RDFCYGPTHEEPIVDMARDTIKSYKQLPLNLYQIQTKFRDEIRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDFGFEKIMVKLSTRPEK 433
           MR R F   DA+ F    Q    CL+  +N++ + Y +   +KI   L+ RP K
Sbjct: 150 MRAREFIMKDAYSFHENSQ----CLRNTYNIMYTTYCNI-LDKI--GLAYRPVK 196


>gi|313633402|gb|EFS00238.1| prolyl-tRNA synthetase [Listeria seeligeri FSL N1-067]
          Length = 568

 Score = 57.4 bits (137), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 60/130 (46%), Gaps = 7/130 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +    LWQ+SG W+ Y   +  +K      +  R FAL P +     A+    +
Sbjct: 68  ELLMPALQPAELWQESGRWNDYGPELMRLKD-----RASRDFALGPTHEEVITALLRDEI 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI-HNLI 411
           KSY+ LP+ L +  + +R+E      GL+R R F   DA+ F    +  +E   + H   
Sbjct: 123 KSYKRLPLTLYQIQTKFRDEKRPRF-GLLRGREFIMKDAYSFHATNESLDEVYDLMHQAY 181

Query: 412 ISIYKDFGFE 421
            +I+   G E
Sbjct: 182 SNIFTRCGLE 191


>gi|300813650|ref|ZP_07093972.1| proline--tRNA ligase [Peptoniphilus sp. oral taxon 836 str. F0141]
 gi|300512192|gb|EFK39370.1| proline--tRNA ligase [Peptoniphilus sp. oral taxon 836 str. F0141]
          Length = 570

 Score = 57.4 bits (137), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 66/138 (47%), Gaps = 7/138 (5%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  SG+  +   G+++ + + + +R ++ +   +EI    +  + +W+ SG W+ Y  
Sbjct: 32  IRKSASGIYTYLTLGYRVVRKIENIVREEMDRCGSQEILMSAIQPREIWEDSGRWEKYGP 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            MF +K   D     R F L P        +    + SY++LP+ L +  + YR+E    
Sbjct: 92  EMFKLKDRHD-----RDFCLGPTAEEYFTTLIKDEVNSYKDLPLNLYQIQTKYRDEKRPR 146

Query: 377 LHGLMRVRGFTQDDAHVF 394
             G+ R R F+  DA+ F
Sbjct: 147 F-GINRAREFSMKDAYTF 163


>gi|77405643|ref|ZP_00782731.1| prolyl-tRNA synthetase [Streptococcus agalactiae H36B]
 gi|161486742|ref|YP_330466.2| prolyl-tRNA synthetase [Streptococcus agalactiae A909]
 gi|114152259|sp|Q3JZ37|SYP_STRA1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|77175716|gb|EAO78497.1| prolyl-tRNA synthetase [Streptococcus agalactiae H36B]
          Length = 617

 Score = 57.4 bits (137), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 53/102 (51%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  +++ +K      +D   F L P +      +    +
Sbjct: 68  EMLAPALLTADLWRESGRYETYGEDLYKLKN-----RDQSDFILGPTHEETFTTLVRDAV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +  S YR+E     +GL+R R F   D + F
Sbjct: 123 KSYKQLPLNLYQIQSKYRDEKR-PRNGLLRTREFIMKDGYSF 163


>gi|282883093|ref|ZP_06291693.1| proline--tRNA ligase [Peptoniphilus lacrimalis 315-B]
 gi|281297070|gb|EFA89566.1| proline--tRNA ligase [Peptoniphilus lacrimalis 315-B]
          Length = 570

 Score = 57.4 bits (137), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 66/138 (47%), Gaps = 7/138 (5%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  SG+  +   G+++ + + + +R ++ +   +EI    +  + +W+ SG W+ Y  
Sbjct: 32  IRKSASGIYTYLTLGYRVVRKIENIVREEMDRCGSQEILMSAIQPREIWEDSGRWEKYGP 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            MF +K   D     R F L P        +    + SY++LP+ L +  + YR+E    
Sbjct: 92  EMFKLKDRHD-----RDFCLGPTAEEYFTTLIKDEVNSYKDLPLNLYQIQTKYRDEKRPR 146

Query: 377 LHGLMRVRGFTQDDAHVF 394
             G+ R R F+  DA+ F
Sbjct: 147 F-GINRAREFSMKDAYTF 163


>gi|162148795|ref|YP_001603256.1| prolyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
 gi|161787372|emb|CAP56967.1| Prolyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
          Length = 476

 Score = 57.4 bits (137), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 62/138 (44%), Gaps = 7/138 (5%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  +G+  W   GW++ Q +   +R +      +E+  P V    LW++SG +D+Y  
Sbjct: 70  IRQTAAGIYAWLPAGWRVLQNIARIVREEQDAIGAQELLMPTVQSAELWKRSGRYDAYGP 129

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  ++      +  R     P N      +F   +KSYRELP  L      +R+E    
Sbjct: 130 EMLRIQD-----RHERELLYGPTNEEMITDLFGQVVKSYRELPQVLYHIQWKFRDEVRPR 184

Query: 377 LHGLMRVRGFTQDDAHVF 394
             G+MR R F   DA+ F
Sbjct: 185 F-GVMRGREFLMKDAYSF 201


>gi|154686074|ref|YP_001421235.1| prolyl-tRNA synthetase [Bacillus amyloliquefaciens FZB42]
 gi|166980099|sp|A7Z4S8|SYP_BACA2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|154351925|gb|ABS74004.1| ProS [Bacillus amyloliquefaciens FZB42]
          Length = 564

 Score = 57.4 bits (137), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 79/170 (46%), Gaps = 18/170 (10%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINT--- 296
           ++E + H+ L R      I ++ SGV  +    +++ Q +    ++ ++++ E+IN    
Sbjct: 17  DAEAKSHKLLLR---AGFIRQNTSGVYSYMPLAYRVIQNI----QKIVREEMEKINAVEM 69

Query: 297 --PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
             P +     WQ+SG W +Y   +  +K      +  R FAL   +     ++    +KS
Sbjct: 70  LMPALQQAETWQESGRWYTYGPELMRLKD-----RHGREFALGATHEEVITSLVRDEVKS 124

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           Y+ LP+ L +  S +R+E      GL+R R F   DA+ F   E+   E 
Sbjct: 125 YKRLPLTLYQIQSKFRDEKRPRF-GLLRGREFIMKDAYSFHASEESLEET 173


>gi|25011939|ref|NP_736334.1| prolyl-tRNA synthetase [Streptococcus agalactiae NEM316]
 gi|81845546|sp|Q8E362|SYP_STRA3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|24413481|emb|CAD47559.1| prolyl-tRNA synthetase [Streptococcus agalactiae NEM316]
          Length = 617

 Score = 57.4 bits (137), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 53/102 (51%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  +++ +K      +D   F L P +      +    +
Sbjct: 68  EMLAPALLTADLWRESGRYETYGEDLYKLKN-----RDQSDFILGPTHEETFTTLVRDAV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +  S YR+E     +GL+R R F   D + F
Sbjct: 123 KSYKQLPLNLYQIQSKYRDEKR-PRNGLLRTREFIMKDGYSF 163


>gi|319745866|gb|EFV98156.1| proline--tRNA ligase [Streptococcus agalactiae ATCC 13813]
          Length = 617

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 53/102 (51%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  +++ +K      +D   F L P +      +    +
Sbjct: 68  EMLAPALLTADLWRESGRYETYGEDLYKLKN-----RDQSDFILGPTHEETFTTLVRDAV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +  S YR+E     +GL+R R F   D + F
Sbjct: 123 KSYKQLPLNLYQIQSKYRDEKR-PRNGLLRTREFIMKDGYSF 163


>gi|313638094|gb|EFS03361.1| prolyl-tRNA synthetase [Listeria seeligeri FSL S4-171]
          Length = 568

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 60/130 (46%), Gaps = 7/130 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +    LWQ+SG W+ Y   +  +K      +  R FAL P +     A+    +
Sbjct: 68  ELLMPALQPAELWQESGRWNDYGPELMRLKD-----RASRDFALGPTHEEVITALLRDEI 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI-HNLI 411
           KSY+ LP+ L +  + +R+E      GL+R R F   DA+ F    +  +E   + H   
Sbjct: 123 KSYKRLPLTLYQIQTKFRDEKRPRF-GLLRGREFIMKDAYSFHATNESLDEVYDLMHQAY 181

Query: 412 ISIYKDFGFE 421
            +I+   G E
Sbjct: 182 SNIFTRCGLE 191


>gi|319760426|ref|YP_004124364.1| prolyl-tRNA synthetase [Candidatus Blochmannia vafer str. BVAF]
 gi|318039140|gb|ADV33690.1| prolyl-tRNA synthetase [Candidatus Blochmannia vafer str. BVAF]
          Length = 595

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 42/178 (23%), Positives = 84/178 (47%), Gaps = 13/178 (7%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDLFH--IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           TQYL    +   ++   ++ ++ L    I +  +G+  W   G ++ + + + +R ++ +
Sbjct: 4   TQYLLTTLKEIPKNCETISHQLMLRSGMIRQISTGLYTWLPIGLRVLRKVENIVRDEMNN 63

Query: 290 -DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
             + EI+ P +   +LW+QSG W  Y   +   K   +     + F L P +      + 
Sbjct: 64  ISFIEISMPIIQPANLWKQSGRWSEYGPELLRFKNRVN-----QEFVLGPTHEEMISNLI 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
              + SY++ P++L +  + YR+E      GL+R + FT  D + F T     N+CL+
Sbjct: 119 CKEIISYKQFPIKLYQMNTKYRDEIRPRF-GLIRAKEFTMKDGYSFHTN----NKCLQ 171


>gi|251788479|ref|YP_003003200.1| prolyl-tRNA synthetase [Dickeya zeae Ech1591]
 gi|247537100|gb|ACT05721.1| prolyl-tRNA synthetase [Dickeya zeae Ech1591]
          Length = 572

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 65/139 (46%), Gaps = 7/139 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    EI+ P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYTWLPTGLRVLKKVENIVREEMNNAGAIEISMPVVQPADLWQESGRWEQYGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
                D     R F L P +      +  + + SY++LP+   +  + +R+E      G+
Sbjct: 96  FVDRGD-----RPFVLGPTHEEVITDLIRNEISSYKQLPLNFYQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQ 399
           MR R F   DA+ F T ++
Sbjct: 150 MRAREFLMKDAYSFHTTQE 168


>gi|289434600|ref|YP_003464472.1| hypothetical protein lse_1235 [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289170844|emb|CBH27386.1| proS [Listeria seeligeri serovar 1/2b str. SLCC3954]
          Length = 568

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 60/130 (46%), Gaps = 7/130 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +    LWQ+SG W+ Y   +  +K      +  R FAL P +     A+    +
Sbjct: 68  ELLMPALQPAELWQESGRWNDYGPELMRLKD-----RASRDFALGPTHEEVITALLRDEI 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI-HNLI 411
           KSY+ LP+ L +  + +R+E      GL+R R F   DA+ F    +  +E   + H   
Sbjct: 123 KSYKRLPLTLYQIQTKFRDEKRPRF-GLLRGREFIMKDAYSFHATNESLDEVYDLMHQAY 181

Query: 412 ISIYKDFGFE 421
            +I+   G E
Sbjct: 182 SNIFTRCGLE 191


>gi|94991250|ref|YP_599350.1| prolyl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
 gi|114152262|sp|Q1JEV3|SYP_STRPD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|94544758|gb|ABF34806.1| Prolyl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
          Length = 618

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  +++ +K  D++      F L P +      +    +
Sbjct: 68  EMLAPALLTADLWRESGRYETYGEDLYKLKNRDNS-----DFILGPTHEETFTTLVRDAV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +  S YR+E     +GL+R R F   D + F
Sbjct: 123 KSYKQLPLNLYQIQSKYRDEKR-PRNGLLRTREFIMKDGYSF 163


>gi|76563495|gb|ABA46079.1| prolyl-tRNA synthetase [Streptococcus agalactiae A909]
          Length = 612

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 53/102 (51%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  +++ +K      +D   F L P +      +    +
Sbjct: 63  EMLAPALLTADLWRESGRYETYGEDLYKLKN-----RDQSDFILGPTHEETFTTLVRDAV 117

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +  S YR+E     +GL+R R F   D + F
Sbjct: 118 KSYKQLPLNLYQIQSKYRDEKR-PRNGLLRTREFIMKDGYSF 158


>gi|77412297|ref|ZP_00788612.1| prolyl-tRNA synthetase [Streptococcus agalactiae CJB111]
 gi|77161644|gb|EAO72640.1| prolyl-tRNA synthetase [Streptococcus agalactiae CJB111]
          Length = 617

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 53/102 (51%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  +++ +K      +D   F L P +      +    +
Sbjct: 68  EMLAPALLTADLWRESGRYETYGEDLYKLKN-----RDQSDFILGPTHEETFTTLVRDAV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +  S YR+E     +GL+R R F   D + F
Sbjct: 123 KSYKQLPLNLYQIQSKYRDEKR-PRNGLLRTREFIMKDGYSF 163


>gi|260914628|ref|ZP_05921094.1| proline-tRNA ligase [Pasteurella dagmatis ATCC 43325]
 gi|260631227|gb|EEX49412.1| proline-tRNA ligase [Pasteurella dagmatis ATCC 43325]
          Length = 571

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 41/159 (25%), Positives = 69/159 (43%), Gaps = 12/159 (7%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++   + + +R ++ K    E+         LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYTWLPTGLRVLNKVENIIREEMDKSGALEVKMAVTQPAELWQESGRWEEYGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            K   D     R F + P N      +      SY++LP+ L    + +R+E      G+
Sbjct: 96  FKDRGD-----RDFVIGPTNEEVITDLIRRECASYKQLPLNLYHIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDF 418
           MR R F   DA+ F T     +ECL K ++++   Y + 
Sbjct: 150 MRSREFVMKDAYSFHTT----HECLQKTYDVMYETYSNI 184


>gi|148238958|ref|YP_001224345.1| prolyl-tRNA synthetase [Synechococcus sp. WH 7803]
 gi|166980165|sp|A5GJD3|SYP_SYNPW RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|147847497|emb|CAK23048.1| Prolyl-tRNA synthetase [Synechococcus sp. WH 7803]
          Length = 594

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 76/171 (44%), Gaps = 5/171 (2%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
           +I   GSG+  +    WK+ + + + +R ++      E   PQ+    LW++SG W  Y 
Sbjct: 31  YIRRIGSGIYAYLPMMWKVLRKINAIVRAELNHLGALETLLPQLQPADLWERSGRWQGYT 90

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
                +   +D  +  R   L P +      +    L+SYR+LPV L +  + +R+E   
Sbjct: 91  EGEGIMFHLED--RQNRQLGLGPTHEEVITELAGDLLRSYRQLPVTLYQIQTKFRDEIRP 148

Query: 376 SLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
              GLMR R F   DA+ F   +E + N    +      I++  G E + V
Sbjct: 149 RF-GLMRGREFIMKDAYSFHANQEDLENTYQAMATAYARIFERCGLEAVAV 198


>gi|22538051|ref|NP_688902.1| prolyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
 gi|76798737|ref|ZP_00780956.1| prolyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
 gi|77414704|ref|ZP_00790836.1| prolyl-tRNA synthetase [Streptococcus agalactiae 515]
 gi|81845373|sp|Q8DXD8|SYP_STRA5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|22534955|gb|AAN00775.1|AE014278_2 prolyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
 gi|76585916|gb|EAO62455.1| prolyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
 gi|77159248|gb|EAO70427.1| prolyl-tRNA synthetase [Streptococcus agalactiae 515]
          Length = 617

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 53/102 (51%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  +++ +K      +D   F L P +      +    +
Sbjct: 68  EMLAPALLTADLWRESGRYETYGEDLYKLKN-----RDQSDFILGPTHEETFTTLVRDAV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +  S YR+E     +GL+R R F   D + F
Sbjct: 123 KSYKQLPLNLYQIQSKYRDEKR-PRNGLLRTREFIMKDGYSF 163


>gi|217976887|ref|YP_002361034.1| prolyl-tRNA synthetase [Methylocella silvestris BL2]
 gi|254782909|sp|B8EP84|SYP_METSB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|217502263|gb|ACK49672.1| prolyl-tRNA synthetase [Methylocella silvestris BL2]
          Length = 440

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 90/204 (44%), Gaps = 18/204 (8%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
           +E+E   HR + R      I ++ +G+  W   G ++ Q +   +R+++ +    E+  P
Sbjct: 16  KEAEIVSHRLMLRAG---MIRQEAAGIYSWLPLGLRVLQKVAEIVRQEMNRAGAIELLMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW+++G +++Y   M  +K   +     R     P N     A+F   ++SYRE
Sbjct: 73  TLQLADLWRETGRYEAYGPEMLRIKDRHE-----REMLYGPTNEDMITAIFRSYVRSYRE 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS---I 414
           LP  L      +R+E      G+MR R F   DA+ F   E      L  + + +S   I
Sbjct: 128 LPKILYHIQWKFRDEQRPRF-GVMRGREFLMKDAYSFDVDEAAAR--LAYNRMFVSYLRI 184

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSD 438
           +   G   I ++  T P   +G D
Sbjct: 185 FARMGLRVIPMRAETGP---IGGD 205


>gi|145637732|ref|ZP_01793384.1| prolyl-tRNA synthetase [Haemophilus influenzae PittHH]
 gi|145269081|gb|EDK09032.1| prolyl-tRNA synthetase [Haemophilus influenzae PittHH]
          Length = 572

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 46/202 (22%), Positives = 89/202 (44%), Gaps = 10/202 (4%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-K 288
           +QYL+   +    D + ++ ++ L    I    SG+  W   G ++ + +   +R ++ K
Sbjct: 4   SQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMASGLYNWLPTGIRVLKKVEKVVREEMNK 63

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
               E+  P V    LW++SG WD Y   +   +   +     R F L P +      + 
Sbjct: 64  GGAIEVLMPVVQPAELWEESGRWDQYGPELLRFEDRGN-----RNFVLGPTHEEVITDLV 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI- 407
              + SY++LP+ L +  + +R+E      G+MR R F   DA+ F T ++       + 
Sbjct: 119 RREVSSYKQLPLNLYQIQTKFRDEVRPRF-GVMRSREFIMKDAYSFHTTQESLQATYDVM 177

Query: 408 HNLIISIYKDFGFEKIMVKLST 429
           + +  +I+   G +   V+  T
Sbjct: 178 YQVYSNIFNRLGLDFRAVQADT 199


>gi|51597293|ref|YP_071484.1| prolyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
 gi|186896398|ref|YP_001873510.1| prolyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
 gi|81825738|sp|Q667L4|SYP_YERPS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226701360|sp|B2JZ09|SYP_YERPB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|51590575|emb|CAH22216.1| prolyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
 gi|186699424|gb|ACC90053.1| prolyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
          Length = 572

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 42/176 (23%), Positives = 81/176 (46%), Gaps = 9/176 (5%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           +QYL   ++    D   ++ ++ L    I +  SG+  W   G ++ + + + +R ++ +
Sbjct: 4   SQYLLSTQKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREEMNN 63

Query: 290 DYE-EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
               E++ P V    LWQ+SG W+ Y   +   +  D   +  R F L P +      + 
Sbjct: 64  AGAIEVSMPVVQPADLWQESGRWEQYGPELL--RFVD---RGERPFVLGPTHEEVITDLI 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
              + SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 119 RGEINSYKQLPLNFFQIQTKFRDELRPRF-GVMRAREFLMKDAYSFHTTQESLQET 173


>gi|315222088|ref|ZP_07863998.1| prolyl-tRNA synthetase [Streptococcus anginosus F0211]
 gi|315188838|gb|EFU22543.1| prolyl-tRNA synthetase [Streptococcus anginosus F0211]
          Length = 619

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 31/121 (25%), Positives = 64/121 (52%), Gaps = 11/121 (9%)

Query: 279 LISYMRRKIKDDYEEINT-----PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           +I   ++ +++++E+I       P +L   LW++SG +++Y  +++ +K  + +      
Sbjct: 49  VIEKAKKIMREEFEKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKNREGS-----D 103

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
           F L P +     A+    +KSY++LP+ L +  + YR+E     +GL+R R F   D + 
Sbjct: 104 FILGPTHEETFTAIVRDSVKSYKQLPLNLYQIQAKYRDEKR-PRNGLLRTREFIMKDGYS 162

Query: 394 F 394
           F
Sbjct: 163 F 163


>gi|83647457|ref|YP_435892.1| prolyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
 gi|114152199|sp|Q2SD07|SYP_HAHCH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|83635500|gb|ABC31467.1| prolyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
          Length = 574

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 36/162 (22%), Positives = 74/162 (45%), Gaps = 8/162 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            +G+  W   G ++ + + + +R ++ +   +E+  P V    LW +SG W+ Y   +  
Sbjct: 36  AAGLYTWLPLGLRVLKKVENIVREEMDRSGAQEVLMPAVQPAELWIESGRWEQYGGELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +    +     R F + P +      +  + LKSY++LP    +    +R+E      G+
Sbjct: 96  IHDRHN-----RDFCVGPTHEEVITDLIRNELKSYKQLPANFYQIQMKFRDERRPRF-GI 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNEC-LKIHNLIISIYKDFGFE 421
           MR R F   DA+ F   ++  +E  + +++    I+  FG +
Sbjct: 150 MRAREFLMKDAYSFHVNQESLDETYMVMYDAYTRIFTRFGLD 191


>gi|16272670|ref|NP_438888.1| prolyl-tRNA synthetase [Haemophilus influenzae Rd KW20]
 gi|260579822|ref|ZP_05847652.1| prolyl-tRNA synthetase [Haemophilus influenzae RdAW]
 gi|1174537|sp|P43830|SYP_HAEIN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|1573733|gb|AAC22388.1| prolyl-tRNA synthetase (proS) [Haemophilus influenzae Rd KW20]
 gi|260093106|gb|EEW77039.1| prolyl-tRNA synthetase [Haemophilus influenzae RdAW]
          Length = 572

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 46/202 (22%), Positives = 89/202 (44%), Gaps = 10/202 (4%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-K 288
           +QYL+   +    D + ++ ++ L    I    SG+  W   G ++ + +   +R ++ K
Sbjct: 4   SQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMASGLYNWLPTGIRVLKKVEKVVREEMNK 63

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
               E+  P V    LW++SG WD Y   +   +   +     R F L P +      + 
Sbjct: 64  GGAIEVLMPVVQPAELWEESGRWDQYGPELLRFEDRGN-----RNFVLGPTHEEVITDLV 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI- 407
              + SY++LP+ L +  + +R+E      G+MR R F   DA+ F T ++       + 
Sbjct: 119 RREVSSYKQLPLNLYQIQTKFRDEVRPRF-GVMRSREFIMKDAYSFHTTQESLQATYDVM 177

Query: 408 HNLIISIYKDFGFEKIMVKLST 429
           + +  +I+   G +   V+  T
Sbjct: 178 YQVYSNIFNRLGLDFRAVQADT 199


>gi|306826599|ref|ZP_07459905.1| proline--tRNA ligase [Streptococcus pyogenes ATCC 10782]
 gi|304431207|gb|EFM34210.1| proline--tRNA ligase [Streptococcus pyogenes ATCC 10782]
          Length = 618

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  +++ +K  D++      F L P +      +    +
Sbjct: 68  EMLAPALLTADLWRESGRYETYGEDLYKLKNRDNS-----DFILGPTHEETFTTLVRDAV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +  S YR+E     +GL+R R F   D + F
Sbjct: 123 KSYKQLPLNLYQIQSKYRDEKR-PRNGLLRTREFIMKDGYSF 163


>gi|145634860|ref|ZP_01790568.1| prolyl-tRNA synthetase [Haemophilus influenzae PittAA]
 gi|145268026|gb|EDK08022.1| prolyl-tRNA synthetase [Haemophilus influenzae PittAA]
          Length = 572

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 46/202 (22%), Positives = 89/202 (44%), Gaps = 10/202 (4%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-K 288
           +QYL+   +    D + ++ ++ L    I    SG+  W   G ++ + +   +R ++ K
Sbjct: 4   SQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMASGLYNWLPTGIRVLKKVEKVVREEMNK 63

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
               E+  P V    LW++SG WD Y   +   +   +     R F L P +      + 
Sbjct: 64  GGAIEVLMPVVQPAELWEESGRWDQYGPELLRFEDRGN-----RNFVLGPTHEEVITDLV 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI- 407
              + SY++LP+ L +  + +R+E      G+MR R F   DA+ F T ++       + 
Sbjct: 119 RREVSSYKQLPLNLYQIQTKFRDEVRPRF-GVMRSREFIMKDAYSFHTTQESLQATYDVM 177

Query: 408 HNLIISIYKDFGFEKIMVKLST 429
           + +  +I+   G +   V+  T
Sbjct: 178 YQVYSNIFNRLGLDFRAVQADT 199


>gi|242238324|ref|YP_002986505.1| prolyl-tRNA synthetase [Dickeya dadantii Ech703]
 gi|242130381|gb|ACS84683.1| prolyl-tRNA synthetase [Dickeya dadantii Ech703]
          Length = 572

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 35/139 (25%), Positives = 65/139 (46%), Gaps = 7/139 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E++ P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYTWLPTGLRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
                D     R F L P +      +  + + SY++LP+   +  + +R+E      G+
Sbjct: 96  FVDRGD-----RPFVLGPTHEEVITDLIRNEISSYKQLPLNFYQIQTKFRDEVRPRF-GI 149

Query: 381 MRVRGFTQDDAHVFCTKEQ 399
           MR R F   DA+ F T ++
Sbjct: 150 MRAREFLMKDAYSFHTTQE 168


>gi|148827919|ref|YP_001292672.1| prolyl-tRNA synthetase [Haemophilus influenzae PittGG]
 gi|166980128|sp|A5UHN3|SYP_HAEIG RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|148719161|gb|ABR00289.1| prolyl-tRNA synthetase [Haemophilus influenzae PittGG]
          Length = 572

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 46/202 (22%), Positives = 89/202 (44%), Gaps = 10/202 (4%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-K 288
           +QYL+   +    D + ++ ++ L    I    SG+  W   G ++ + +   +R ++ K
Sbjct: 4   SQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMASGLYNWLPTGIRVLKKVEKIIREEMNK 63

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
               E+  P V    LW++SG WD Y   +   +   +     R F L P +      + 
Sbjct: 64  GGAIEVLMPVVQPAELWEESGRWDQYGPELLRFEDRGN-----RNFVLGPTHEEVITDLV 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI- 407
              + SY++LP+ L +  + +R+E      G+MR R F   DA+ F T ++       + 
Sbjct: 119 RREVSSYKQLPLNLYQIQTKFRDEVRPRF-GVMRSREFIMKDAYSFHTTQESLQATYDVM 177

Query: 408 HNLIISIYKDFGFEKIMVKLST 429
           + +  +I+   G +   V+  T
Sbjct: 178 YQVYSNIFNRLGLDFRAVQADT 199


>gi|221133881|ref|ZP_03560186.1| prolyl-tRNA synthetase [Glaciecola sp. HTCC2999]
          Length = 570

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 46/198 (23%), Positives = 90/198 (45%), Gaps = 18/198 (9%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDLFH--IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-K 288
           +QYL   ++    D   ++ ++ L    + +  SG+  +   G ++   + + +R ++ K
Sbjct: 4   SQYLLSTQKETPADAEVVSHQLMLRSGMVRKVASGLYNYLPTGLRVLNKVANIVREEMNK 63

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
               EI  P V    LW++SG W+ Y   +  +K      +  R F L P +     A+ 
Sbjct: 64  AGAIEIQMPVVQPADLWEESGRWEEYGPELLRIKD-----RHQRDFVLGPTHEEVVTALV 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL--- 405
            + + SY++LP+ L +  + +R+E      G+MR R F   DA+ F     +  +CL   
Sbjct: 119 RNEVSSYKQLPLNLYQIQTKFRDEVRPRF-GIMRGREFLMKDAYSF----HLSQDCLQTT 173

Query: 406 --KIHNLIISIYKDFGFE 421
             K+     ++++  G E
Sbjct: 174 YDKMFQAYCNVFERIGLE 191


>gi|50915027|ref|YP_060999.1| prolyl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
 gi|139474448|ref|YP_001129164.1| prolyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
 gi|81822684|sp|Q5X9U7|SYP_STRP6 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|152112957|sp|A2RGI4|SYP_STRPG RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|50904101|gb|AAT87816.1| Prolyl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
 gi|134272695|emb|CAM30966.1| prolyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
          Length = 618

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  +++ +K  D++      F L P +      +    +
Sbjct: 68  EMLAPALLTADLWRESGRYETYGEDLYKLKNRDNS-----DFILGPTHEETFTTLVRDAV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +  S YR+E     +GL+R R F   D + F
Sbjct: 123 KSYKQLPLNLYQIQSKYRDEKR-PRNGLLRTREFIMKDGYSF 163


>gi|297191728|ref|ZP_06909126.1| prolyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC 25486]
 gi|297151037|gb|EDY65325.2| prolyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC 25486]
          Length = 691

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 44/192 (22%), Positives = 90/192 (46%), Gaps = 19/192 (9%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R     ++  + +G+  W   G ++ + +   +R ++     +E+  P 
Sbjct: 148 DAETLSHKLLVRA---GYVRRNAAGIWSWLPLGKRVLENVTRVVREEMDAIGAQEVLLPA 204

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L +  ++ +G W+ Y A +F +K  D    D        +  P H  +F   +K    S
Sbjct: 205 LLPKEPYEATGRWEEYGAELFRLK--DRKGADY-------LLGPTHEEIFTQLVKDQCTS 255

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIIS 413
           Y++LPV L +  + YR+E +    G++R R F   D++ F T ++   E   +H    + 
Sbjct: 256 YKDLPVILYQIQTKYRDE-ARPRSGILRGREFQMKDSYSFDTSDEGLAESYALHREAYVR 314

Query: 414 IYKDFGFEKIMV 425
           I++  G +  +V
Sbjct: 315 IFERLGLKHKIV 326


>gi|145628390|ref|ZP_01784191.1| prolyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
 gi|145638474|ref|ZP_01794084.1| prolyl-tRNA synthetase [Haemophilus influenzae PittII]
 gi|144980165|gb|EDJ89824.1| prolyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
 gi|145272803|gb|EDK12710.1| prolyl-tRNA synthetase [Haemophilus influenzae PittII]
 gi|309751606|gb|ADO81590.1| Prolyl-tRNA synthetase [Haemophilus influenzae R2866]
 gi|309973773|gb|ADO96974.1| Prolyl-tRNA synthetase [Haemophilus influenzae R2846]
          Length = 572

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 46/202 (22%), Positives = 89/202 (44%), Gaps = 10/202 (4%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-K 288
           +QYL+   +    D + ++ ++ L    I    SG+  W   G ++ + +   +R ++ K
Sbjct: 4   SQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMASGLYNWLPTGIRVLKKVEKVVREEMNK 63

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
               E+  P V    LW++SG WD Y   +   +   +     R F L P +      + 
Sbjct: 64  GGAIEVLMPVVQPAELWEESGRWDQYGPELLRFEDRGN-----RNFVLGPTHEEVITDLV 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI- 407
              + SY++LP+ L +  + +R+E      G+MR R F   DA+ F T ++       + 
Sbjct: 119 RREVSSYKQLPLNLYQIQTKFRDEVRPRF-GVMRSREFIMKDAYSFHTTQESLQATYDVM 177

Query: 408 HNLIISIYKDFGFEKIMVKLST 429
           + +  +I+   G +   V+  T
Sbjct: 178 YQVYSNIFNRLGLDFRAVQADT 199


>gi|330502208|ref|YP_004379077.1| prolyl-tRNA synthetase [Pseudomonas mendocina NK-01]
 gi|328916494|gb|AEB57325.1| prolyl-tRNA synthetase [Pseudomonas mendocina NK-01]
          Length = 571

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 38/161 (23%), Positives = 70/161 (43%), Gaps = 8/161 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++      E+  P +    LWQ+SG W  Y   +  
Sbjct: 36  ASGLYTWLPMGLRVLRKVENVVREEMNAAGALEVLMPAIQPAELWQESGRWVQYGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +K   D     R F + P +      +  + L SY++LP+   +  + +R+E      GL
Sbjct: 96  IKDRHD-----REFCVGPTHEEVITDLARNELNSYKQLPINFYQIQTKFRDEIRPRF-GL 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGF 420
           MR R F   DA+ F   +    E   ++H    +++   G 
Sbjct: 150 MRGREFLMKDAYSFHADQASLQETYDRMHQAYCNVFTRLGL 190


>gi|303255041|ref|ZP_07341117.1| prolyl-tRNA synthetase [Streptococcus pneumoniae BS455]
 gi|302597871|gb|EFL64941.1| prolyl-tRNA synthetase [Streptococcus pneumoniae BS455]
          Length = 617

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     A+    +
Sbjct: 68  EMLAPALLSAELWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFTAIVRDSV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +    YR+E     +GL+R R F   DA+ F
Sbjct: 123 KSYKQLPLNLYQIQPKYRDEKR-PRNGLLRTREFIMKDAYSF 163


>gi|292670562|ref|ZP_06603988.1| proline-tRNA ligase [Selenomonas noxia ATCC 43541]
 gi|292647728|gb|EFF65700.1| proline-tRNA ligase [Selenomonas noxia ATCC 43541]
          Length = 570

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 82/184 (44%), Gaps = 11/184 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E   HR + R      I +   G+  +    W+  + +   +R +++    +EI  P 
Sbjct: 17  EAEIASHRLMYRA---GLIRKSAGGMYTYLPLAWRTIRKIEEIIRAEMEAVGGQEIMMPI 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW++SG W +Y A M  +K   D     R F + P +     A+    L+SY++L
Sbjct: 74  LQPSELWEESGRWGAYGAEMIRIKDRHD-----REFCMGPTHEEMITALVRDELRSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKD 417
           PV L +    +R+E      G+MR R F   D + F    +  NE   K++    +I+  
Sbjct: 129 PVLLYQIQDKFRDERRPRF-GIMRSREFIMQDLYSFDEDIEGMNESYRKMYAAYSNIFTR 187

Query: 418 FGFE 421
            G +
Sbjct: 188 CGLD 191


>gi|15675760|ref|NP_269934.1| prolyl-tRNA synthetase [Streptococcus pyogenes M1 GAS]
 gi|71911486|ref|YP_283036.1| prolyl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
 gi|81856026|sp|Q99XY4|SYP_STRP1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|13622982|gb|AAK34655.1| putative prolyl-tRNA synthetase [Streptococcus pyogenes M1 GAS]
 gi|71854268|gb|AAZ52291.1| prolyl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
          Length = 618

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  +++ +K  D++      F L P +      +    +
Sbjct: 68  EMLAPALLTADLWRESGRYETYGEDLYKLKNRDNS-----DFILGPTHEETFTTLVRDAV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +  S YR+E     +GL+R R F   D + F
Sbjct: 123 KSYKQLPLNLYQIQSKYRDEKR-PRNGLLRTREFIMKDGYSF 163


>gi|56808720|ref|ZP_00366440.1| COG0442: Prolyl-tRNA synthetase [Streptococcus pyogenes M49 591]
 gi|94995163|ref|YP_603261.1| prolyl-tRNA synthetase [Streptococcus pyogenes MGAS10750]
 gi|209560100|ref|YP_002286572.1| prolyl-tRNA synthetase [Streptococcus pyogenes NZ131]
 gi|114152263|sp|Q1J4L9|SYP_STRPF RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226701346|sp|B5XIL5|SYP_STRPZ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|94548671|gb|ABF38717.1| Prolyl-tRNA synthetase [Streptococcus pyogenes MGAS10750]
 gi|209541301|gb|ACI61877.1| Prolyl-tRNA synthetase [Streptococcus pyogenes NZ131]
          Length = 618

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  +++ +K  D++      F L P +      +    +
Sbjct: 68  EMLAPALLTADLWRESGRYETYGEDLYKLKNRDNS-----DFILGPTHEETFTTLVRDAV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +  S YR+E     +GL+R R F   D + F
Sbjct: 123 KSYKQLPLNLYQIQSKYRDEKR-PRNGLLRTREFIMKDGYSF 163


>gi|225856022|ref|YP_002737533.1| prolyl-tRNA synthetase [Streptococcus pneumoniae P1031]
 gi|254782921|sp|C1CIE5|SYP_STRZP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|225724634|gb|ACO20486.1| prolyl-tRNA synthetase [Streptococcus pneumoniae P1031]
          Length = 617

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     A+    +
Sbjct: 68  EMLAPALLSAELWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFTAIVRDSV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +    YR+E     +GL+R R F   DA+ F
Sbjct: 123 KSYKQLPLNLYQIQPKYRDEKR-PRNGLLRTREFIMKDAYSF 163


>gi|221231165|ref|YP_002510317.1| prolyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669]
 gi|225853864|ref|YP_002735376.1| prolyl-tRNA synthetase [Streptococcus pneumoniae JJA]
 gi|254782918|sp|B8ZKT3|SYP_STRPJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|254782920|sp|C1CC55|SYP_STRZJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|220673625|emb|CAR68112.1| prolyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669]
 gi|225723520|gb|ACO19373.1| prolyl-tRNA synthetase [Streptococcus pneumoniae JJA]
 gi|332076711|gb|EGI87173.1| prolyl-tRNA synthetase [Streptococcus pneumoniae GA17545]
          Length = 617

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     A+    +
Sbjct: 68  EMLAPTLLSAELWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFTAIVRDSV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +    YR+E     +GL+R R F   DA+ F
Sbjct: 123 KSYKQLPLNLYQIQPKYRDEKR-PRNGLLRTREFIMKDAYSF 163


>gi|225711306|gb|ACO11499.1| Mitochondrial 39S ribosomal protein L39 [Caligus rogercresseyi]
          Length = 330

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/187 (26%), Positives = 85/187 (45%), Gaps = 22/187 (11%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI----EIITPEDPRSL-AVIRH 75
           +T  +  + I  SL +++    +N ++ D++ P+ E  I        PEDP  L      
Sbjct: 79  STPFNATQHIQESLLERSALATVNEQLWDMNRPLEEDCIIKFLHFQQPEDPFHLNKAFWR 138

Query: 76  SCAHIMAEAVQSI-----WPEVQVAIGPIIEDG-FYYDFDKE----QPFSSDELAQIEKK 125
           SC+ ++   ++++     + E+     P ++ G F YD D +     P S +EL      
Sbjct: 139 SCSFMLGATLEALFQEKFYVELHSFPAPNVQSGSFVYDVDLKFCDWTP-SKEELMSFSAY 197

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK----ENVTLYRQGEWFD 181
           M  +  R+ PF +  +    A  +FE  +  YK + + SI A      +VTLYR GE  D
Sbjct: 198 MHRLAERELPFERLVVDASVALRIFEDNQ--YKTKQIPSIAANSKSGNSVTLYRLGEHVD 255

Query: 182 LCRGPHV 188
           +  GP V
Sbjct: 256 ISGGPMV 262


>gi|148983669|ref|ZP_01816988.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
 gi|147923816|gb|EDK74928.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
 gi|301799407|emb|CBW31944.1| prolyl-tRNA synthetase [Streptococcus pneumoniae OXC141]
          Length = 617

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     A+    +
Sbjct: 68  EMLAPALLSAELWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFTAIVRDSV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +    YR+E     +GL+R R F   DA+ F
Sbjct: 123 KSYKQLPLNLYQIQPKYRDEKR-PRNGLLRTREFIMKDAYSF 163


>gi|149011134|ref|ZP_01832439.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
 gi|147764770|gb|EDK71700.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
          Length = 617

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     A+    +
Sbjct: 68  EMLAPALLSAELWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFTAIVRDSV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +    YR+E     +GL+R R F   DA+ F
Sbjct: 123 KSYKQLPLNLYQIQPKYRDEKR-PRNGLLRTREFIMKDAYSF 163


>gi|94989304|ref|YP_597405.1| prolyl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
 gi|94993193|ref|YP_601292.1| prolyl-tRNA synthetase [Streptococcus pyogenes MGAS2096]
 gi|114152260|sp|Q1J9R3|SYP_STRPB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|114152261|sp|Q1JJW2|SYP_STRPC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|94542812|gb|ABF32861.1| prolyl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
 gi|94546701|gb|ABF36748.1| Prolyl-tRNA synthetase [Streptococcus pyogenes MGAS2096]
          Length = 618

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  +++ +K  D++      F L P +      +    +
Sbjct: 68  EMLAPALLTADLWRESGRYETYGEDLYKLKNRDNS-----DFILGPTHEETFTTLVRDAV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +  S YR+E     +GL+R R F   D + F
Sbjct: 123 KSYKQLPLNLYQIQSKYRDEKR-PRNGLLRTREFIMKDGYSF 163


>gi|319775327|ref|YP_004137815.1| prolyl-tRNA synthetase [Haemophilus influenzae F3047]
 gi|319897767|ref|YP_004135964.1| prolyl-tRNA synthetase [Haemophilus influenzae F3031]
 gi|329122677|ref|ZP_08251255.1| proline--tRNA ligase [Haemophilus aegyptius ATCC 11116]
 gi|317433273|emb|CBY81648.1| prolyl-tRNA synthetase [Haemophilus influenzae F3031]
 gi|317449918|emb|CBY86130.1| prolyl-tRNA synthetase [Haemophilus influenzae F3047]
 gi|327472551|gb|EGF17981.1| proline--tRNA ligase [Haemophilus aegyptius ATCC 11116]
          Length = 572

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/202 (22%), Positives = 89/202 (44%), Gaps = 10/202 (4%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-K 288
           +QYL+   +    D + ++ ++ L    I    SG+  W   G ++ + +   +R ++ K
Sbjct: 4   SQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMASGLYNWLPTGIRVLKKVEKVVREEMNK 63

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
               E+  P V    LW++SG WD Y   +   +   +     R F L P +      + 
Sbjct: 64  GGAIEVLMPVVQPAELWEESGRWDQYGPELLRFEDRGN-----RNFVLGPTHEEVITDLV 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI- 407
              + SY++LP+ L +  + +R+E      G+MR R F   DA+ F T ++       + 
Sbjct: 119 RREVSSYKQLPLNLYQIQTKFRDEVRPRF-GVMRSREFIMKDAYSFHTTQESLQATYDVM 177

Query: 408 HNLIISIYKDFGFEKIMVKLST 429
           + +  +I+   G +   V+  T
Sbjct: 178 YQVYSNIFNRLGLDFRAVQADT 199


>gi|182683244|ref|YP_001834991.1| prolyl-tRNA synthetase [Streptococcus pneumoniae CGSP14]
 gi|303259373|ref|ZP_07345350.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
 gi|303261128|ref|ZP_07347077.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
 gi|303263456|ref|ZP_07349379.1| prolyl-tRNA synthetase [Streptococcus pneumoniae BS397]
 gi|303265748|ref|ZP_07351646.1| prolyl-tRNA synthetase [Streptococcus pneumoniae BS457]
 gi|303267821|ref|ZP_07353623.1| prolyl-tRNA synthetase [Streptococcus pneumoniae BS458]
 gi|226701345|sp|B2ISI9|SYP_STRPS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|182628578|gb|ACB89526.1| prolyl-tRNA synthetase [Streptococcus pneumoniae CGSP14]
 gi|302637965|gb|EFL68451.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
 gi|302639307|gb|EFL69765.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
 gi|302642517|gb|EFL72862.1| prolyl-tRNA synthetase [Streptococcus pneumoniae BS458]
 gi|302644656|gb|EFL74905.1| prolyl-tRNA synthetase [Streptococcus pneumoniae BS457]
 gi|302647229|gb|EFL77453.1| prolyl-tRNA synthetase [Streptococcus pneumoniae BS397]
          Length = 617

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     A+    +
Sbjct: 68  EMLAPALLSAELWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFTAIVRDSV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +    YR+E     +GL+R R F   DA+ F
Sbjct: 123 KSYKQLPLNLYQIQPKYRDEKR-PRNGLLRTREFIMKDAYSF 163


>gi|148994606|ref|ZP_01823748.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
 gi|168489739|ref|ZP_02713938.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|147927136|gb|EDK78174.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
 gi|183571778|gb|EDT92306.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|332075929|gb|EGI86396.1| prolyl-tRNA synthetase [Streptococcus pneumoniae GA17570]
          Length = 617

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     A+    +
Sbjct: 68  EMLAPALLSAELWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFTAIVRDSV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +    YR+E     +GL+R R F   DA+ F
Sbjct: 123 KSYKQLPLNLYQIQPKYRDEKR-PRNGLLRTREFIMKDAYSF 163


>gi|149017957|ref|ZP_01834416.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
 gi|147931521|gb|EDK82499.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
          Length = 617

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     A+    +
Sbjct: 68  EMLAPTLLSAELWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFTAIVRDSV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +    YR+E     +GL+R R F   DA+ F
Sbjct: 123 KSYKQLPLNLYQIQPKYRDEKR-PRNGLLRTREFIMKDAYSF 163


>gi|312867906|ref|ZP_07728110.1| proline--tRNA ligase [Streptococcus parasanguinis F0405]
 gi|311096310|gb|EFQ54550.1| proline--tRNA ligase [Streptococcus parasanguinis F0405]
          Length = 616

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 53/102 (51%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +D+Y  +++ +K  + +      F L P +     A+    +
Sbjct: 68  EMLAPALLSADLWRESGRYDTYGEDLYKLKNREGS-----DFILGPTHEETFTAIVRDSV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +    YR+E     +GL+R R F   D + F
Sbjct: 123 KSYKQLPLNLYQIQPKYRDEKR-PRNGLLRTREFIMKDGYSF 163


>gi|301793532|emb|CBW35907.1| prolyl-tRNA synthetase [Streptococcus pneumoniae INV104]
          Length = 617

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     A+    +
Sbjct: 68  EMLAPALLSAELWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFTAIVRDSV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +    YR+E     +GL+R R F   DA+ F
Sbjct: 123 KSYKQLPLNLYQIQPKYRDEKR-PRNGLLRTREFIMKDAYSF 163


>gi|194397930|ref|YP_002036964.1| prolyl-tRNA synthetase [Streptococcus pneumoniae G54]
 gi|307126481|ref|YP_003878512.1| prolyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
 gi|226701343|sp|B5E6T8|SYP_STRP4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|194357597|gb|ACF56045.1| prolyl-tRNA synthetase [Streptococcus pneumoniae G54]
 gi|306483543|gb|ADM90412.1| prolyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
          Length = 617

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     A+    +
Sbjct: 68  EMLAPALLSAELWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFTAIVRDSV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +    YR+E     +GL+R R F   DA+ F
Sbjct: 123 KSYKQLPLNLYQIQPKYRDEKR-PRNGLLRTREFIMKDAYSF 163


>gi|71904323|ref|YP_281126.1| prolyl-tRNA synthetase [Streptococcus pyogenes MGAS6180]
 gi|114152264|sp|Q48R89|SYP_STRPM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|71803418|gb|AAX72771.1| prolyl-tRNA synthetase [Streptococcus pyogenes MGAS6180]
          Length = 618

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  +++ +K  D++      F L P +      +    +
Sbjct: 68  EMLAPALLTADLWRESGRYETYGEDLYKLKNRDNS-----DFILGPTHEETFTTLVRDAV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +  S YR+E     +GL+R R F   D + F
Sbjct: 123 KSYKQLPLNLYQIQSKYRDEKR-PRNGLLRTREFIMKDGYSF 163


>gi|15603235|ref|NP_246309.1| prolyl-tRNA synthetase [Pasteurella multocida subsp. multocida str.
           Pm70]
 gi|81856712|sp|Q9CL72|SYP_PASMU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|12721741|gb|AAK03454.1| ProS [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 571

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/159 (25%), Positives = 69/159 (43%), Gaps = 12/159 (7%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++   +   +R ++ K    E+         LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYTWLPTGLRVLNKVEKIIREEMDKSGALEVKMAVTQPAELWQESGRWEEYGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            K   +     R F + P N      +    L SY++LP+ L    + +R+E      G+
Sbjct: 96  FKDRGE-----RDFVIGPTNEEVITDLVRRELSSYKQLPLNLYHIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDF 418
           MR R F   DA+ F T     +ECL K ++++   Y + 
Sbjct: 150 MRSREFVMKDAYSFHTT----HECLQKTYDVMYETYSNI 184


>gi|15902287|ref|NP_357837.1| prolyl-tRNA synthetase [Streptococcus pneumoniae R6]
 gi|116515963|ref|YP_815764.1| prolyl-tRNA synthetase [Streptococcus pneumoniae D39]
 gi|81845175|sp|Q8DRB0|SYP_STRR6 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|122279350|sp|Q04MI4|SYP_STRP2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|15457791|gb|AAK99047.1| Prolyl-tRNA synthetase [Streptococcus pneumoniae R6]
 gi|116076539|gb|ABJ54259.1| prolyl-tRNA synthetase [Streptococcus pneumoniae D39]
          Length = 617

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     A+    +
Sbjct: 68  EMLAPALLSAELWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFTAIVRDSV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +    YR+E     +GL+R R F   DA+ F
Sbjct: 123 KSYKQLPLNLYQIQPKYRDEKR-PRNGLLRTREFIMKDAYSF 163


>gi|301169449|emb|CBW29049.1| prolyl-tRNA synthetase [Haemophilus influenzae 10810]
          Length = 572

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/202 (22%), Positives = 89/202 (44%), Gaps = 10/202 (4%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-K 288
           +QYL+   +    D + ++ ++ L    I    SG+  W   G ++ + +   +R ++ K
Sbjct: 4   SQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMASGLYNWLPTGIRVLKKVEKVVREEMNK 63

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
               E+  P V    LW++SG WD Y   +   +   +     R F L P +      + 
Sbjct: 64  GGAIEVLMPVVQPAELWEESGRWDQYGPELLRFEDRGN-----RNFVLGPTHEEVITDLV 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI- 407
              + SY++LP+ L +  + +R+E      G+MR R F   DA+ F T ++       + 
Sbjct: 119 RREVSSYKQLPLNLYQIQTKFRDEVRPRF-GVMRSREFIMKDAYSFHTTQESLQATYDVM 177

Query: 408 HNLIISIYKDFGFEKIMVKLST 429
           + +  +I+   G +   V+  T
Sbjct: 178 YQVYSNIFNRLGLDFRAVQADT 199


>gi|271501814|ref|YP_003334840.1| prolyl-tRNA synthetase [Dickeya dadantii Ech586]
 gi|270345369|gb|ACZ78134.1| prolyl-tRNA synthetase [Dickeya dadantii Ech586]
          Length = 572

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 65/139 (46%), Gaps = 7/139 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    EI+ P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYTWLPTGLRVLKKVENIVREEMNNAGAIEISMPVVQPADLWQESGRWEQYGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
                D     R F L P +      +  + + SY++LP+   +  + +R+E      G+
Sbjct: 96  FVDRGD-----RPFVLGPTHEEVITDLIRNEISSYKQLPLNFYQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQ 399
           MR R F   DA+ F T ++
Sbjct: 150 MRAREFLMKDAYSFHTTQE 168


>gi|225858114|ref|YP_002739624.1| prolyl-tRNA synthetase [Streptococcus pneumoniae 70585]
 gi|254782917|sp|C1CB39|SYP_STRP7 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|225721841|gb|ACO17695.1| prolyl-tRNA synthetase [Streptococcus pneumoniae 70585]
          Length = 617

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     A+    +
Sbjct: 68  EMLAPALLSAELWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFTAIVRDSV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +    YR+E     +GL+R R F   DA+ F
Sbjct: 123 KSYKQLPLNLYQIQPKYRDEKR-PRNGLLRTREFIMKDAYSF 163


>gi|149006018|ref|ZP_01829747.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74]
 gi|147762374|gb|EDK69335.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74]
          Length = 617

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     A+    +
Sbjct: 68  EMLAPALLSAELWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFTAIVRDSV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +    YR+E     +GL+R R F   DA+ F
Sbjct: 123 KSYKQLPLNLYQIQPKYRDEKR-PRNGLLRTREFIMKDAYSF 163


>gi|148988004|ref|ZP_01819467.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
 gi|148996688|ref|ZP_01824406.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
 gi|149001621|ref|ZP_01826594.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
 gi|168484646|ref|ZP_02709598.1| prolyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
 gi|168493960|ref|ZP_02718103.1| prolyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
 gi|168576309|ref|ZP_02722192.1| prolyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
 gi|169833273|ref|YP_001693792.1| prolyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
 gi|225860301|ref|YP_002741810.1| prolyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
 gi|237649666|ref|ZP_04523918.1| prolyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974]
 gi|237821366|ref|ZP_04597211.1| prolyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974M2]
 gi|298229643|ref|ZP_06963324.1| prolyl-tRNA synthetase [Streptococcus pneumoniae str. Canada
           MDR_19F]
 gi|298256044|ref|ZP_06979630.1| prolyl-tRNA synthetase [Streptococcus pneumoniae str. Canada
           MDR_19A]
 gi|298502082|ref|YP_003724022.1| proline--tRNA ligase [Streptococcus pneumoniae TCH8431/19A]
 gi|307066942|ref|YP_003875908.1| prolyl-tRNA synthetase [Streptococcus pneumoniae AP200]
 gi|226701344|sp|B1I8Z1|SYP_STRPI RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|254782922|sp|C1CPD8|SYP_STRZT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|147757263|gb|EDK64302.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
 gi|147760079|gb|EDK67068.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
 gi|147926468|gb|EDK77541.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
 gi|168995775|gb|ACA36387.1| prolyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
 gi|172042164|gb|EDT50210.1| prolyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
 gi|183576158|gb|EDT96686.1| prolyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
 gi|183577873|gb|EDT98401.1| prolyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
 gi|225727194|gb|ACO23045.1| prolyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
 gi|298237677|gb|ADI68808.1| proline--tRNA ligase [Streptococcus pneumoniae TCH8431/19A]
 gi|301801205|emb|CBW33879.1| prolyl-tRNA synthetase [Streptococcus pneumoniae INV200]
 gi|306408479|gb|ADM83906.1| Prolyl-tRNA synthetase [Streptococcus pneumoniae AP200]
 gi|327390681|gb|EGE89021.1| prolyl-tRNA synthetase [Streptococcus pneumoniae GA04375]
 gi|332077566|gb|EGI88027.1| prolyl-tRNA synthetase [Streptococcus pneumoniae GA41301]
 gi|332202178|gb|EGJ16247.1| prolyl-tRNA synthetase [Streptococcus pneumoniae GA41317]
 gi|332203430|gb|EGJ17497.1| prolyl-tRNA synthetase [Streptococcus pneumoniae GA47368]
 gi|332204272|gb|EGJ18337.1| prolyl-tRNA synthetase [Streptococcus pneumoniae GA47901]
          Length = 617

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     A+    +
Sbjct: 68  EMLAPALLSAELWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFTAIVRDSV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +    YR+E     +GL+R R F   DA+ F
Sbjct: 123 KSYKQLPLNLYQIQPKYRDEKR-PRNGLLRTREFIMKDAYSF 163


>gi|313816766|gb|EFS54480.1| prolyl-tRNA synthetase [Propionibacterium acnes HL059PA1]
          Length = 581

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/198 (24%), Positives = 92/198 (46%), Gaps = 19/198 (9%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   HR L R   +  +A    GV  W   G ++ + + +  R ++     +E++ P 
Sbjct: 15  DAEVPSHRWLVRAGYIRRVA---PGVYSWLPLGLRVMRRIEAICREEMASIGAQEVSFPA 71

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L    ++++G W  Y  N+F        +KD +   +  +  P H  +F   +K    S
Sbjct: 72  LLASDPYKETGRWVEYGDNLF-------RLKDRKGVDM--LLGPTHEEMFTLMVKDLYSS 122

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH-NLIIS 413
           Y+ LP+ L +  + YR+E +    G++R R F   DA+ F   ++  +E  +   +  I 
Sbjct: 123 YKALPLCLYQIQNKYRDE-ARPRAGILRGREFVMMDAYSFDVAQEGLDEAYQAQRDAYIR 181

Query: 414 IYKDFGFEKIMVKLSTRP 431
           I+   GF+  +VK  + P
Sbjct: 182 IFNRLGFDYAIVKAMSGP 199


>gi|255994086|ref|ZP_05427221.1| proline--tRNA ligase [Eubacterium saphenum ATCC 49989]
 gi|255993754|gb|EEU03843.1| proline--tRNA ligase [Eubacterium saphenum ATCC 49989]
          Length = 582

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 77/164 (46%), Gaps = 10/164 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+E + H  L R   +  +A   SGV  +   G K  + + + +R ++  +  +EI    
Sbjct: 17  EAELKSHILLLRAGMIRKLA---SGVYGYMPMGLKALKKIENIIRNEMDAEGCQEILMSA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW++SG W++Y   M+ V    D     R F L P +      +  + + S+R+L
Sbjct: 74  LQPAELWKESGRWNAYGPEMWRVCDRHD-----REFCLGPTHEEVFTDIIRNDVDSHRKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN 402
           P+ L +  + YR+E      GLMR R F   D++ F   E+  +
Sbjct: 129 PINLYQIQTKYRDEARPRF-GLMRSREFIMKDSYSFDKDEEGLD 171


>gi|145632080|ref|ZP_01787815.1| frataxin-like protein [Haemophilus influenzae 3655]
 gi|144986987|gb|EDJ93517.1| frataxin-like protein [Haemophilus influenzae 3655]
          Length = 572

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/202 (22%), Positives = 89/202 (44%), Gaps = 10/202 (4%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-K 288
           +QYL+   +    D + ++ ++ L    I    SG+  W   G ++ + +   +R ++ K
Sbjct: 4   SQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMASGLYNWLPTGIRVLKKVEKVVREEMNK 63

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
               E+  P V    LW++SG WD Y   +   +   +     R F L P +      + 
Sbjct: 64  GGAIEVLMPVVQPAELWEESGRWDQYGPELLRFEDRGN-----RNFVLGPTHEEVITDLV 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI- 407
              + SY++LP+ L +  + +R+E      G+MR R F   DA+ F T ++       + 
Sbjct: 119 RREVSSYKQLPLNLYQIQTKFRDEVRPRF-GVMRSREFIMKDAYSFHTTQESLQATYDVM 177

Query: 408 HNLIISIYKDFGFEKIMVKLST 429
           + +  +I+   G +   V+  T
Sbjct: 178 YQVYSNIFNRLGLDFRAVQADT 199


>gi|88657672|ref|YP_507541.1| prolyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas]
 gi|114152195|sp|Q2GG92|SYP_EHRCR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|88599129|gb|ABD44598.1| prolyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas]
          Length = 424

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 83/179 (46%), Gaps = 14/179 (7%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  SG+  W   G K+ + + + +R ++ K    EI  P +    LW++SG +D Y +
Sbjct: 32  IKQIASGIYTWLPLGLKVLKNIENIVREEMNKSGSLEILMPLIQPASLWKESGRYDDYGS 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  +     T ++ R     P +      +      S+++LP+ L +    +R+E    
Sbjct: 92  EMLRI-----TDRNQREMLFGPTHEEVITDILRTTPVSHKDLPLILYQIQWKFRDELRPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI----ISIYKDFGFEKIMVKLSTRP 431
            +G+MR R F   DA+ F   ++ F+  +  +NL+    I I++  G   I VK  + P
Sbjct: 147 -YGIMRCREFLMKDAYSF---DKDFSGAISSYNLMFKTYIKIFQKLGLTPIAVKADSGP 201


>gi|15900198|ref|NP_344802.1| prolyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
 gi|81855097|sp|Q97SR1|SYP_STRPN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|14971734|gb|AAK74442.1| prolyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
          Length = 617

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     A+    +
Sbjct: 68  EMLAPALLSAELWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFTAIVRDSV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +    YR+E     +GL+R R F   DA+ F
Sbjct: 123 KSYKQLPLNLYQIQPKYRDEKR-PRNGLLRTREFIMKDAYSF 163


>gi|111658322|ref|ZP_01409011.1| hypothetical protein SpneT_02000512 [Streptococcus pneumoniae
           TIGR4]
          Length = 612

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     A+    +
Sbjct: 63  EMLAPALLSAELWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFTAIVRDSV 117

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +    YR+E     +GL+R R F   DA+ F
Sbjct: 118 KSYKQLPLNLYQIQPKYRDEKR-PRNGLLRTREFIMKDAYSF 158


>gi|288940948|ref|YP_003443188.1| prolyl-tRNA synthetase [Allochromatium vinosum DSM 180]
 gi|288896320|gb|ADC62156.1| prolyl-tRNA synthetase [Allochromatium vinosum DSM 180]
          Length = 572

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/184 (23%), Positives = 81/184 (44%), Gaps = 11/184 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E   HR + R   +  +A   +G+  W   G ++ + +   +R ++ +    E++ P 
Sbjct: 17  DAEIASHRLMLRAGLIRKLA---AGLYTWLPLGLRVLRRVERIVREEMDRAGALEVSMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    LWQ+SG W+ Y   +   K      +  R F   P +      +  + LKSY++L
Sbjct: 74  VQPAELWQESGRWEQYGPELLRFKD-----RHQREFCFGPTHEEIITELARNELKSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKD 417
           P+   +  + +R+E      G+MR R F   DA+ F   +    E   ++H     I+  
Sbjct: 129 PINFYQIQTKFRDEIRPRF-GVMRAREFLMKDAYSFHLDDASLAETYQRMHEAYCRIFTR 187

Query: 418 FGFE 421
            G +
Sbjct: 188 CGLD 191


>gi|29347937|ref|NP_811440.1| uridine kinase [Bacteroides thetaiotaomicron VPI-5482]
 gi|253572528|ref|ZP_04849930.1| uridine kinase [Bacteroides sp. 1_1_6]
 gi|298387819|ref|ZP_06997369.1| phosphoribulokinase family protein [Bacteroides sp. 1_1_14]
 gi|29339839|gb|AAO77634.1| uridine kinase (uridine monophosphokinase) [Bacteroides
           thetaiotaomicron VPI-5482]
 gi|251837943|gb|EES66032.1| uridine kinase [Bacteroides sp. 1_1_6]
 gi|298259424|gb|EFI02298.1| phosphoribulokinase family protein [Bacteroides sp. 1_1_14]
          Length = 557

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/184 (21%), Positives = 85/184 (46%), Gaps = 2/184 (1%)

Query: 15  KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVI 73
           K FP+ ++  D+    + +   + V+  +N +   L+  V     IE +   D   +   
Sbjct: 16  KEFPIGSSLLDIYYGFNLNFPYQVVSAKVNNRSEGLNFKVYNNKDIEFLDVRDSSGMRTY 75

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
             S   ++ +AV  ++PE ++ +   +  G++ +    +P + +++ +I+++MQEIIA +
Sbjct: 76  VRSLCFVLFKAVSELFPEGKLFVEHPVSKGYFCNLRIGRPITLEDVTRIKQRMQEIIAEN 135

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQ 193
             + +      +A  +F  +    KV +LE+         Y  G+  D   G  + STG 
Sbjct: 136 ISYHRIECHTAEAVRVFSERGMNDKVRLLET-SGSLYTYYYTLGDTVDYYYGNLLPSTGY 194

Query: 194 VKKF 197
           +K F
Sbjct: 195 IKLF 198


>gi|313819523|gb|EFS57237.1| prolyl-tRNA synthetase [Propionibacterium acnes HL046PA2]
          Length = 581

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/198 (24%), Positives = 92/198 (46%), Gaps = 19/198 (9%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   HR L R   +  +A    GV  W   G ++ + + +  R ++     +E++ P 
Sbjct: 15  DAEVPSHRWLVRAGYIRRVA---PGVYSWLPLGLRVMRRIEAICREEMASIGAQEVSFPA 71

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L    ++++G W  Y  N+F        +KD +   +  +  P H  +F   +K    S
Sbjct: 72  LLASDPYKETGRWVEYGDNLF-------RLKDRKGVDM--LLGPTHEEMFTLMVKDLYSS 122

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH-NLIIS 413
           Y+ LP+ L +  + YR+E +    G++R R F   DA+ F   ++  +E  +   +  I 
Sbjct: 123 YKALPLCLYQIQNKYRDE-ARPRAGILRGREFVMMDAYSFDVAQEGLDEAYQAQRDAYIR 181

Query: 414 IYKDFGFEKIMVKLSTRP 431
           I+   GF+  +VK  + P
Sbjct: 182 IFNRLGFDYAIVKAMSGP 199


>gi|307132338|ref|YP_003884354.1| prolyl-tRNA synthetase [Dickeya dadantii 3937]
 gi|306529867|gb|ADM99797.1| prolyl-tRNA synthetase [Dickeya dadantii 3937]
          Length = 572

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 65/139 (46%), Gaps = 7/139 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    EI+ P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYTWLPTGLRVLKKVENIVREEMNNAGAIEISMPVVQPADLWQESGRWEQYGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
                D     R F L P +      +  + + SY++LP+   +  + +R+E      G+
Sbjct: 96  FVDRGD-----RPFVLGPTHEEVITDLIRNEISSYKQLPLNFYQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQ 399
           MR R F   DA+ F T ++
Sbjct: 150 MRAREFLMKDAYSFHTTQE 168


>gi|168492219|ref|ZP_02716362.1| prolyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
 gi|183573637|gb|EDT94165.1| prolyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
          Length = 617

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     A+    +
Sbjct: 68  EMLAPALLSAELWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFTAIVRDSV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +    YR+E     +GL+R R F   DA+ F
Sbjct: 123 KSYKQLPLNLYQIQPKYRDEKR-PRNGLLRTREFIMKDAYSF 163


>gi|119470323|ref|ZP_01613082.1| prolyl-tRNA synthetase [Alteromonadales bacterium TW-7]
 gi|119446495|gb|EAW27770.1| prolyl-tRNA synthetase [Alteromonadales bacterium TW-7]
          Length = 574

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/162 (24%), Positives = 73/162 (45%), Gaps = 8/162 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ K    E+  P +    LW++SG W  +   +  
Sbjct: 36  ASGLYTWLPSGLRVLRKVENIVREEMDKAGAIEMLMPVIQPADLWEESGRWSEFGPELMR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
                 T +  R FAL P +           + SY++LP+ L +  +  R+E      G+
Sbjct: 96  F-----TDRHNREFALGPTHEEVITDFVRKEVNSYKQLPLTLYQVQTKVRDERRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDFGFE 421
           MR R FT  DA+ F   E+  N   + +H    +I++  G +
Sbjct: 150 MRAREFTMKDAYSFHLSEECLNNTYQAMHKAYCNIFERLGLD 191


>gi|322377188|ref|ZP_08051680.1| proline--tRNA ligase [Streptococcus sp. M334]
 gi|321281901|gb|EFX58909.1| proline--tRNA ligase [Streptococcus sp. M334]
          Length = 617

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     A+    +
Sbjct: 68  EMLAPALLSAELWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFTAIVRDSV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +    YR+E     +GL+R R F   DA+ F
Sbjct: 123 KSYKQLPLNLYQIQPKYRDEKR-PRNGLLRTREFIMKDAYSF 163


>gi|160946442|ref|ZP_02093651.1| hypothetical protein PEPMIC_00402 [Parvimonas micra ATCC 33270]
 gi|158447558|gb|EDP24553.1| hypothetical protein PEPMIC_00402 [Parvimonas micra ATCC 33270]
          Length = 567

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/169 (24%), Positives = 80/169 (47%), Gaps = 10/169 (5%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
           +E+E   H+ L R      I +  +G+  +   G++  + + + +R ++ +    EI   
Sbjct: 16  QEAEIISHKLLLR---AGMIRKSAAGIYSYLPLGYRTIRKVENIVREEMDRMGGYEILMS 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +  + +W++SG W ++   MF VK  ++     R F L P        + +  +KSY++
Sbjct: 73  ALQPKEIWEESGRWQTFGPEMFKVKDRNE-----REFCLGPTAEEYFTTLISGEIKSYKQ 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           LP+ + +  + YR+E      G+ R R F+  DA+ F    +M  E  K
Sbjct: 128 LPLNIYQIQTKYRDEKRPRF-GINRAREFSMKDAYTFDVSPEMMMESYK 175


>gi|328947267|ref|YP_004364604.1| Prolyl-tRNA synthetase [Treponema succinifaciens DSM 2489]
 gi|328447591|gb|AEB13307.1| Prolyl-tRNA synthetase [Treponema succinifaciens DSM 2489]
          Length = 603

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/186 (20%), Positives = 82/186 (44%), Gaps = 8/186 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           G+G+  +   G + ++ L   ++ +I+     E     ++   +W++SG W++    M  
Sbjct: 36  GNGLYTYMPFGLRAYRKLEKIIKEEIEASGAMEFKPTVIVPGDIWKESGRWETMGPQMLK 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +      +  +   + P     + A+   GL SY++LP+   +  + YR+E     +G+
Sbjct: 96  AQN-----RQQQDMVVSPTAEEAYTAIMRQGLTSYKQLPINCYQINTKYRDEIR-PRYGV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKIH-NLIISIYKDFGFEKIMVKLSTRPEKRVGSDA 439
           MR R F   D +     ++  ++  + +    + I+K  G + I VK  T      GS+ 
Sbjct: 150 MRGREFNMMDGYTLNADDESLDQSYQAYAKAYLRIFKRLGLDVITVKADTGAMGGSGSEE 209

Query: 440 LWDDAE 445
              ++E
Sbjct: 210 FMVESE 215


>gi|307710999|ref|ZP_07647421.1| prolyl-tRNA synthetase [Streptococcus mitis SK321]
 gi|307616961|gb|EFN96139.1| prolyl-tRNA synthetase [Streptococcus mitis SK321]
          Length = 617

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     A+    +
Sbjct: 68  EMLAPALLSAELWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFTAIVRDSV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +    YR+E     +GL+R R F   DA+ F
Sbjct: 123 KSYKQLPLNLYQIQPKYRDEKR-PRNGLLRTREFIMKDAYSF 163


>gi|256369253|ref|YP_003106761.1| prolyl-tRNA synthetase [Brucella microti CCM 4915]
 gi|255999413|gb|ACU47812.1| prolyl-tRNA synthetase [Brucella microti CCM 4915]
          Length = 442

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 53/214 (24%), Positives = 91/214 (42%), Gaps = 25/214 (11%)

Query: 236 YFL-------EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KI 287
           YFL       +E+E   HR + R      I +  +G+  W   G K+   + + +R  + 
Sbjct: 6   YFLPILKENPKEAEIVSHRLMLRS---GMIRQQSAGIYSWLPIGLKVLNKVCTIIREEQN 62

Query: 288 KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
           +    EI  P +    LW++SG +D+Y   M    C  D  +  R     P N      +
Sbjct: 63  RAGANEILMPTIQSADLWRESGRYDAYGKEML---CIQD--RQEREMLFGPTNEEMVTDI 117

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
           F   ++SY++LP+ L      +R+E      G+MR R F   DA+ F    +     +  
Sbjct: 118 FRSYVRSYKDLPLNLYHIQWKFRDEVRPRF-GVMRSREFLMKDAYSFDLDYE--GAKMAY 174

Query: 408 HNLIISIYKDF---GFEKIMVKLSTRPEKRVGSD 438
           + + +S  + F   G + I ++  T P   +G D
Sbjct: 175 YRMFVSYLRTFARVGLQAIPMRADTGP---IGGD 205


>gi|325295715|ref|YP_004282229.1| Prolyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM
           11699]
 gi|325066163|gb|ADY74170.1| Prolyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM
           11699]
          Length = 576

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 66/151 (43%), Gaps = 8/151 (5%)

Query: 272 GWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G K+   +   +R ++ K   +E+  P +    LW +SG WD Y   M   K   D    
Sbjct: 46  GVKVLLKIEKVIREEMNKAGAQEVILPIMHPAELWIESGRWDVYGKEMIKFKDRHD---- 101

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
            R +AL P        +    +KSY++LP+ L + G  +R+E      GLMR R F   D
Sbjct: 102 -RDYALGPTAEEMITDLVRKEVKSYKDLPLNLYQIGRKFRDEIRPRF-GLMRAREFIMKD 159

Query: 391 AHVF-CTKEQMFNECLKIHNLIISIYKDFGF 420
           A+ F  + E    E   ++     I++  G 
Sbjct: 160 AYSFHASNEDAEREYWNMYETYSRIFRKMGL 190


>gi|281357583|ref|ZP_06244070.1| prolyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548]
 gi|281315840|gb|EFA99866.1| prolyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548]
          Length = 575

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 79/158 (50%), Gaps = 14/158 (8%)

Query: 272 GWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G +I + + + +R ++ + + +E+  P VL   LW++SG ++S  A +   +  +D    
Sbjct: 44  GKRIVEKIEAIIREEMNRIEGQEVLMPVVLPADLWKESGRYESVGAELLRFRDRND---- 99

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
            +   L   +  G V +    L SY++LPV L +  + YR+E +    GL+RVR FT  D
Sbjct: 100 -KPMILAMTHEEGIVHLVRTELNSYKQLPVMLYQIQTKYRDE-ARPRAGLIRVREFTMKD 157

Query: 391 AHVFCTK----EQMFNECLKIHNLIISIYKDFGFEKIM 424
           A+ F T     E+ +  C   H     I++  G + ++
Sbjct: 158 AYSFHTDQADLEKYYYRC---HEAYERIFRRVGMKNVL 192


>gi|307709960|ref|ZP_07646407.1| prolyl-tRNA synthetase [Streptococcus mitis SK564]
 gi|307619331|gb|EFN98460.1| prolyl-tRNA synthetase [Streptococcus mitis SK564]
          Length = 617

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     A+    +
Sbjct: 68  EMLAPALLSAELWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFTAIVRDSV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +    YR+E     +GL+R R F   DA+ F
Sbjct: 123 KSYKQLPLNLYQIQPKYRDEKR-PRNGLLRTREFIMKDAYSF 163


>gi|241895744|ref|ZP_04783040.1| prolyl-tRNA synthetase [Weissella paramesenteroides ATCC 33313]
 gi|241870787|gb|EER74538.1| prolyl-tRNA synthetase [Weissella paramesenteroides ATCC 33313]
          Length = 570

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/160 (23%), Positives = 74/160 (46%), Gaps = 8/160 (5%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           +GV  +     ++   + + +R ++ K D  E+  P +L   LW++SG +++Y  N+F +
Sbjct: 37  AGVYAYLPLAQRVLNKINAIIREEMEKIDAIEMTAPVLLPAELWEESGRYETYGPNLFKL 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           K      +  R   L P +      +    +KSY+ LP+ L +  +  R+E      G++
Sbjct: 97  KN-----RHGRDMILGPTHEETMTTLIRDDIKSYKRLPLTLYQIQTKLRDEDRPRF-GVL 150

Query: 382 RVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGF 420
           R R F   DA+ F   E   ++   K+    ++I+   G 
Sbjct: 151 RGREFIMKDAYSFSIDEAGLDDAYKKMETAYVNIFDRVGL 190


>gi|146306290|ref|YP_001186755.1| prolyl-tRNA synthetase [Pseudomonas mendocina ymp]
 gi|166980142|sp|A4XRQ7|SYP_PSEMY RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|145574491|gb|ABP84023.1| prolyl-tRNA synthetase [Pseudomonas mendocina ymp]
          Length = 571

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/161 (23%), Positives = 71/161 (44%), Gaps = 8/161 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++      E+  P +    LWQ+SG W  Y   +  
Sbjct: 36  ASGLYTWLPMGLRVLRKVENVVREEMNAAGALEVLMPAIQPAELWQESGRWVQYGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           VK   +     R F + P +      +  + L SY++LP+ + +  + +R+E      GL
Sbjct: 96  VKDRHE-----REFCVGPTHEEVITDLARNELNSYKQLPINMYQIQTKFRDEIRPRF-GL 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGF 420
           MR R F   DA+ F   +    E   ++H    +++   G 
Sbjct: 150 MRGREFIMKDAYSFHADQASLQETYDRMHQAYCNVFSRLGL 190


>gi|75676056|ref|YP_318477.1| prolyl-tRNA synthetase [Nitrobacter winogradskyi Nb-255]
 gi|114152223|sp|Q3SRG6|SYP_NITWN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|74420926|gb|ABA05125.1| Prolyl-tRNA synthetase [Nitrobacter winogradskyi Nb-255]
          Length = 439

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 93/443 (20%), Positives = 171/443 (38%), Gaps = 61/443 (13%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTP 297
           +E+E   HR + R      I ++ +G+  W   G ++ + + + +R  + +    E+  P
Sbjct: 16  KEAEIVSHRLMLRAG---MIRQEAAGIYAWLPLGLRVLKKIEAIVREEQNRAGAIELLMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW++SG +D+Y   M  ++      +  R     P N      +F   ++SY+ 
Sbjct: 73  TLQLADLWRESGRYDAYGPEMLRIQD-----RHKRELLYGPTNEEMITEIFRGYIRSYKS 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYK 416
           LP+ L      +R+E      G+MR R F   DA+ F   E        ++    +  + 
Sbjct: 128 LPLNLYHIQWKFRDEQRPRF-GVMRGREFLMKDAYSFDIDEAGARRSYNRMFVAYLRTFA 186

Query: 417 DFGFEKIMVKLSTRPEKRVGSD------ALWDDAEN---IMKGVLDT-IKNSSQD----- 461
             G + I ++  T P   +G D       L +  E+   I K VLD  I  +  D     
Sbjct: 187 RMGLKAIPMRAETGP---IGGDLSHEFIVLAETGESGVYIDKDVLDLPIPGTEVDYDGDL 243

Query: 462 -----RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS-HS 515
                +  T     E    GP++E  + +   R      I+V          FY  + +S
Sbjct: 244 TPIVRQWTTAYAATEDVHDGPRYEREVPEE--RRVHTRGIEVG-------QIFYFGTKYS 294

Query: 516 EKCHPVM---------IHRAVFG-SIERFIGIMIENFKGNL----PLWLSPIQAIVTTIT 561
           E    ++         IH   +G  + R +G +IE          P  ++P    +  + 
Sbjct: 295 ESMKALVTGTDGVEQPIHGGSYGVGVSRLVGAIIEACHDEAGIKWPEAVAPFTVAILNLK 354

Query: 562 SSAV---EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERS 618
             A    E  + I   L +  + +  D  ++    K     +   P  ++ G K  +E  
Sbjct: 355 QGASDTDEACERIYRELSARGVDVLYDDTDQRAGAKFATADLIGSPWQVMVGPKGLAEGK 414

Query: 619 IGIRRFGSTTTQKVSLLDAIPIL 641
           + I+R G  + + V+L DA+  L
Sbjct: 415 VEIKRRGDGSRENVALEDAVARL 437


>gi|307704119|ref|ZP_07641047.1| prolyl-tRNA synthetase [Streptococcus mitis SK597]
 gi|307622341|gb|EFO01350.1| prolyl-tRNA synthetase [Streptococcus mitis SK597]
          Length = 617

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     A+    +
Sbjct: 68  EMLAPALLSAELWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFTAIVRDSV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +    YR+E     +GL+R R F   DA+ F
Sbjct: 123 KSYKQLPLNLYQIQPKYRDEKR-PRNGLLRTREFIMKDAYSF 163


>gi|307708104|ref|ZP_07644572.1| prolyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
 gi|307615889|gb|EFN95094.1| prolyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
          Length = 617

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     A+    +
Sbjct: 68  EMLAPALLSAELWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFTAIVRDSV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +    YR+E     +GL+R R F   DA+ F
Sbjct: 123 KSYKQLPLNLYQIQPKYRDEKR-PRNGLLRTREFIMKDAYSF 163


>gi|191638564|ref|YP_001987730.1| prolyl-tRNA synthetase [Lactobacillus casei BL23]
 gi|190712866|emb|CAQ66872.1| Prolyl-tRNA synthetase (Proline--tRNA ligase) (ProRS)
           [Lactobacillus casei BL23]
          Length = 579

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 57/112 (50%), Gaps = 6/112 (5%)

Query: 288 KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
           K D  ++  P +L   LW++SG +++Y  N+F +K   D     R   L P +      +
Sbjct: 67  KIDAVKMKMPVLLPAELWEESGRYETYGPNLFKLKNRQD-----RKMILGPTHEETFTDL 121

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQ 399
             + LKSY+ +P+ L +    +R+E     +G++R R F   DA+ F + +Q
Sbjct: 122 VRNELKSYKRMPLVLYQIQDKFRDEDRPR-YGVLRGREFIMQDAYSFTSNDQ 172


>gi|325528042|gb|EGD05262.1| prolyl-tRNA synthetase [Burkholderia sp. TJI49]
          Length = 578

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 58/130 (44%), Gaps = 7/130 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P V    LWQ+SG W+ Y   +   K   D       F + P +      +  + +
Sbjct: 68  ELLMPAVQPAELWQESGRWEQYGPELLRFKDRKDN-----DFVIGPTHEEVVTDIARNQI 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLI 411
           KSYR++PV   +  + +R+E      G+MR R F   DA+ F    +  NE   K++   
Sbjct: 123 KSYRQMPVNFYQIQTKFRDEIRPRF-GVMRGREFIMKDAYSFDKDAEGLNESYRKMYEAY 181

Query: 412 ISIYKDFGFE 421
           + I+   G E
Sbjct: 182 VRIFTRLGLE 191


>gi|321478075|gb|EFX89033.1| hypothetical protein DAPPUDRAFT_304699 [Daphnia pulex]
          Length = 326

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 57/245 (23%), Positives = 114/245 (46%), Gaps = 32/245 (13%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT--PEDPRSLAVIR--- 74
           +T  + A+ IS  L K +V   +NG++ DL  P+  + ++++++  PE+    +++    
Sbjct: 80  STPYNCAQHISEHLMKNSVVAEVNGEIWDLHRPIPSDCTLKLLSMKPENQHQASLVNKTF 139

Query: 75  -HSCAHIMAEAVQ-SIWPEVQVAI-----GPIIEDGFYYD----FDKEQPFSSDELAQIE 123
             SC++++   V+ S   ++ V +       +    F YD     D   P S ++  QI 
Sbjct: 140 WRSCSYLLGAVVEGSFQDDISVTLHSFPPANVRSGSFVYDVQLSLDDWVP-SLNDFRQIA 198

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN----VTLYRQGEW 179
              Q+ + ++  F +  +    A ++FE    A+K + +  I  K +    VT+YR G+ 
Sbjct: 199 ATFQKFVRQNHTFQRLDIDSSVALKMFEDN--AFKADQIPHIATKSSSGNTVTVYRCGDH 256

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            D+ RGP + ST  V +      +A  + R DS    + R  G A  ++  +  + + + 
Sbjct: 257 IDISRGPMIASTSLVGR----CSIAAVH-RLDSR---IYRFQGVALPSEIYINHFAFGIL 308

Query: 240 ESEKR 244
           E+  R
Sbjct: 309 ETRAR 313


>gi|227499759|ref|ZP_03929859.1| proline--tRNA ligase [Anaerococcus tetradius ATCC 35098]
 gi|227218145|gb|EEI83411.1| proline--tRNA ligase [Anaerococcus tetradius ATCC 35098]
          Length = 572

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 73/156 (46%), Gaps = 10/156 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R      I +  SGV  +   G K+   + + +R  ++D D  E++T  
Sbjct: 17  DAETESHKFLTRGG---FIRKQASGVYSFLPLGKKVVNKIEAIVREAMEDYDSIEVSTSI 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +  + +W+ SG W+++   MF +K   D     R + L P       ++    L SY++L
Sbjct: 74  LQTREIWEASGRWETFGPEMFKIKDRHD-----REYCLGPTAEESFTSLIKDELNSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           P+ + +    +R+E      G+ R R F   DA+ F
Sbjct: 129 PLNIYQIVDKFRDEKRPRF-GINRSRDFLMKDAYSF 163


>gi|227534928|ref|ZP_03964977.1| prolyl-tRNA synthetase (proline--tRNA ligase) (ProRS)
           [Lactobacillus paracasei subsp. paracasei ATCC 25302]
 gi|227187684|gb|EEI67751.1| prolyl-tRNA synthetase (proline--tRNA ligase) (ProRS)
           [Lactobacillus paracasei subsp. paracasei ATCC 25302]
          Length = 575

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 57/112 (50%), Gaps = 6/112 (5%)

Query: 288 KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
           K D  ++  P +L   LW++SG +++Y  N+F +K   D     R   L P +      +
Sbjct: 63  KIDAVKMKMPVLLPAELWEESGRYETYGPNLFKLKNRQD-----RKMILGPTHEETFTDL 117

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQ 399
             + LKSY+ +P+ L +    +R+E     +G++R R F   DA+ F + +Q
Sbjct: 118 VRNELKSYKRMPLVLYQIQDKFRDEDRPR-YGVLRGREFIMQDAYSFTSNDQ 168


>gi|227529103|ref|ZP_03959152.1| prolyl-tRNA synthetase [Lactobacillus vaginalis ATCC 49540]
 gi|227350947|gb|EEJ41238.1| prolyl-tRNA synthetase [Lactobacillus vaginalis ATCC 49540]
          Length = 580

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/170 (21%), Positives = 83/170 (48%), Gaps = 10/170 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E   H+ + R   ++ ++   +GV  +    +++ + + + +R+++ K    E+  P 
Sbjct: 17  DAEALSHKMMVRAGYIYQVS---AGVWAYLPMAYRVIRKVENIIRQEMEKAGAVEMMMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L   LW++SG ++SY  N+F +K   D     R F + P +      V    +KSY++L
Sbjct: 74  LLPADLWKESGRYESYGDNLFKLKDRRD-----RDFIMGPTHEETFTEVIRDSIKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
           P+ + +    +R+E     +G++R + F   D + F   +   ++   + 
Sbjct: 129 PLVVYQLQDKFRDEDR-PRYGILRGKEFEMLDGYSFSADQAGLDQAYDLQ 177


>gi|126667243|ref|ZP_01738216.1| prolyl-tRNA synthetase [Marinobacter sp. ELB17]
 gi|126628188|gb|EAZ98812.1| prolyl-tRNA synthetase [Marinobacter sp. ELB17]
          Length = 576

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/161 (22%), Positives = 70/161 (43%), Gaps = 8/161 (4%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           +G+  W   G +    +   +R ++ +   +E+  P V    LW++SG WD Y   +  +
Sbjct: 37  AGLYTWLPMGLRTLHKVERIVREEMDRSGAQELLMPAVQPAELWRESGRWDEYGGELLRM 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
                  +  R F   P +      +  + LKSY++LP    +  + +R+E      G+M
Sbjct: 97  ND-----RHGREFCFGPTHEEVITDLIRNELKSYKQLPANFFQIQTKFRDERRPRF-GVM 150

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLKI-HNLIISIYKDFGFE 421
           R R F   DA+ F    +  +E  ++ H    +I+   G +
Sbjct: 151 RAREFIMKDAYSFHINAESLDETYQLMHRTYCAIFDRLGLD 191


>gi|116495061|ref|YP_806795.1| prolyl-tRNA synthetase [Lactobacillus casei ATCC 334]
 gi|122263522|sp|Q038L9|SYP_LACC3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|116105211|gb|ABJ70353.1| Prolyl-tRNA synthetase [Lactobacillus casei ATCC 334]
 gi|327382602|gb|AEA54078.1| Prolyl-tRNA synthetase [Lactobacillus casei LC2W]
 gi|327385800|gb|AEA57274.1| Prolyl-tRNA synthetase [Lactobacillus casei BD-II]
          Length = 575

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 57/112 (50%), Gaps = 6/112 (5%)

Query: 288 KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
           K D  ++  P +L   LW++SG +++Y  N+F +K   D     R   L P +      +
Sbjct: 63  KIDAVKMKMPVLLPAELWEESGRYETYGPNLFKLKNRQD-----RKMILGPTHEETFTDL 117

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQ 399
             + LKSY+ +P+ L +    +R+E     +G++R R F   DA+ F + +Q
Sbjct: 118 VRNELKSYKRMPLVLYQIQDKFRDEDRPR-YGVLRGREFIMQDAYSFTSNDQ 168


>gi|15604249|ref|NP_220765.1| prolyl-tRNA synthetase [Rickettsia prowazekii str. Madrid E]
 gi|6226191|sp|Q9ZDE7|SYP_RICPR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|3860941|emb|CAA14841.1| PROLYL-TRNA SYNTHETASE (proS) [Rickettsia prowazekii]
 gi|292571991|gb|ADE29906.1| Prolyl-tRNA synthetase [Rickettsia prowazekii Rp22]
          Length = 432

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/205 (23%), Positives = 89/205 (43%), Gaps = 10/205 (4%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFH--IAEDGSGVIFWHRKGWKIFQTLISYMRRKI- 287
           L++Y   + + E  + + ++ ++ L    I +  +G+  W   G K+ + + + +R  + 
Sbjct: 3   LSKYFLPILKEEPSEAKVISHKLMLRSGMIMKQAAGLYTWLPLGLKVLKNIENVVRSNMN 62

Query: 288 KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
           K    E+  P +   HLW +SG ++ Y   M   +   D      T    P N      +
Sbjct: 63  KVGALEVLMPCIQPAHLWIESGRFEHYGKEMLKFQDRHDN-----TLLFGPTNEDMITDI 117

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLK 406
           F   +KSY++LP  L      +R+E      G+MR R F   DA+ F   ++   N   K
Sbjct: 118 FRRNIKSYKDLPKNLYHIQWKFRDEIRPRF-GVMRGREFLMKDAYSFDINQKNAVNTYNK 176

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRP 431
           ++   ++ ++D G   I V     P
Sbjct: 177 MYKAYMNTFRDLGVFAIPVIADNGP 201


>gi|146304669|ref|YP_001191985.1| prolyl-tRNA synthetase [Metallosphaera sedula DSM 5348]
 gi|172046942|sp|A4YI09|SYP_METS5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|145702919|gb|ABP96061.1| prolyl-tRNA synthetase [Metallosphaera sedula DSM 5348]
          Length = 480

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 91/381 (23%), Positives = 161/381 (42%), Gaps = 67/381 (17%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSG-HWDSYRANMF 319
           GSGV  W   G+KI Q + + +R+ + +  +EE+  P ++ + L ++   H   +   +F
Sbjct: 35  GSGV--WMPYGFKIRQNVTTLIRKLLDETGHEEVLFPLLIPETLLKKEAEHIKGFEKEVF 92

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHG 379
            V    +   + R FAL+P +      + +  +K Y +LP +  +  SV+R E + +   
Sbjct: 93  WVTHGGEDELEER-FALRPTSEVAITLMESLWIKGYSQLPRKFYQIVSVFRYE-TKATRP 150

Query: 380 LMRVRGF-TQDDAHVFCTKEQMFNECLKIHNLIISIY-KDFGFEKIMVKLSTRPEKRVGS 437
           ++RVR   T  +AH   T  + F +  +  +  + IY K F    I   +S RPE     
Sbjct: 151 MIRVRELSTFKEAH---TVHETFEDAARQVDEAVEIYSKFFDILGIPYLISRRPE----- 202

Query: 438 DALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ 497
              WD                             GA Y    + I+ D  GR  Q GT  
Sbjct: 203 ---WDKF--------------------------AGAEYTIALDTIMPD--GRALQIGTAH 231

Query: 498 VDFNLPSRFNAF--YVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-----LPLWL 550
              +L   F     Y    ++  H V  H+  +G  +R I  +I +  G+     LP  +
Sbjct: 232 ---HLGQHFTKAMDYKVQRADGSH-VHPHQTSYGISDRVIATVI-SINGDDHGPILPPVV 286

Query: 551 SPIQAIVTTITSSAVE-------YAQEIANLLKSHHLSIETDF-RNETINYKIREHSIKK 602
           +PI+ ++  I   + E       YA E+ ++LK+  + +  D   ++T   K     +K 
Sbjct: 287 APIEGVIIPIPGKSEEDTEKINKYAMEVESVLKNSGIRVALDASEDKTPGEKYYIWELKG 346

Query: 603 IPIIIICGDKEASERSIGIRR 623
           +PI I  G +E +  +  ++R
Sbjct: 347 VPIRIEIGPRELNSGTAFLKR 367


>gi|301066624|ref|YP_003788647.1| prolyl-tRNA synthetase [Lactobacillus casei str. Zhang]
 gi|300439031|gb|ADK18797.1| Prolyl-tRNA synthetase [Lactobacillus casei str. Zhang]
          Length = 575

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 57/112 (50%), Gaps = 6/112 (5%)

Query: 288 KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
           K D  ++  P +L   LW++SG +++Y  N+F +K   D     R   L P +      +
Sbjct: 63  KIDAVKMKMPVLLPAELWEESGRYETYGPNLFKLKNRQD-----RKMILGPTHEETFTDL 117

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQ 399
             + LKSY+ +P+ L +    +R+E     +G++R R F   DA+ F + +Q
Sbjct: 118 VRNELKSYKRMPLVLYQIQDKFRDEDRPR-YGVLRGREFIMQDAYSFTSNDQ 168


>gi|289168683|ref|YP_003446952.1| prolyl-tRNA synthetase [Streptococcus mitis B6]
 gi|288908250|emb|CBJ23092.1| prolyl-tRNA synthetase [Streptococcus mitis B6]
          Length = 617

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     A+    +
Sbjct: 68  EMLAPALLSAELWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFTAIVRDSV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +    YR+E     +GL+R R F   DA+ F
Sbjct: 123 KSYKQLPLNLYQIQPKYRDEKR-PRNGLLRTREFIMKDAYSF 163


>gi|256752738|ref|ZP_05493586.1| AAA ATPase [Thermoanaerobacter ethanolicus CCSD1]
 gi|256748376|gb|EEU61432.1| AAA ATPase [Thermoanaerobacter ethanolicus CCSD1]
          Length = 547

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/188 (24%), Positives = 87/188 (46%), Gaps = 3/188 (1%)

Query: 11  DGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRS 69
           +G+I  +P      D+A+          VA  ++ ++ DL+  V ++ ++E +       
Sbjct: 6   EGNIYEYPEGTKLEDIAKDFEHVYNGIIVAAKVDNELRDLNYTVLKDSTVEFVDTTIEEG 65

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
             + R S   +  +AV+ + P   V I   +  G Y +       ++  ++ I+K+M+EI
Sbjct: 66  TRIYRRSLTFVFIKAVKELLPGATVTIEHSLGKGLYCEIHGYS-LNNKIVSMIKKRMEEI 124

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
           I +D    ++ L  E+A +LFE +    KV++ +    K+ V +Y      D    P V 
Sbjct: 125 IEKDLKIERKMLPKEEAIKLFEKEGLTEKVKLFKDT-DKDKVPVYYCDGTVDFFYSPCVP 183

Query: 190 STGQVKKF 197
           STG +K F
Sbjct: 184 STGYLKVF 191


>gi|157150969|ref|YP_001451117.1| prolyl-tRNA synthetase [Streptococcus gordonii str. Challis substr.
           CH1]
 gi|189083519|sp|A8AZA7|SYP_STRGC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|157075763|gb|ABV10446.1| prolyl-tRNA synthetase [Streptococcus gordonii str. Challis substr.
           CH1]
          Length = 616

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 54/102 (52%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  ++F +K  + +      F L P +     A+    +
Sbjct: 68  EMLAPALLSADLWRESGRYETYGDDLFKLKNREGS-----DFILGPTHEETFTALVRDSV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +    YR+E     +GL+R R F   DA+ F
Sbjct: 123 KSYKQLPLNLYQIQPKYRDEKR-PRNGLLRTREFIMKDAYSF 163


>gi|239631344|ref|ZP_04674375.1| prolyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|239525809|gb|EEQ64810.1| prolyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           8700:2]
          Length = 570

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 57/112 (50%), Gaps = 6/112 (5%)

Query: 288 KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
           K D  ++  P +L   LW++SG +++Y  N+F +K   D     R   L P +      +
Sbjct: 58  KIDAVKMKMPVLLPAELWEESGRYETYGPNLFKLKNRQD-----RKMILGPTHEETFTDL 112

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQ 399
             + LKSY+ +P+ L +    +R+E     +G++R R F   DA+ F + +Q
Sbjct: 113 VRNELKSYKRMPLVLYQIQDKFRDEDRPR-YGVLRGREFIMQDAYSFTSNDQ 163


>gi|332365812|gb|EGJ43569.1| proline--tRNA ligase [Streptococcus sanguinis SK355]
          Length = 616

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 55/102 (53%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     A+ +  +
Sbjct: 68  EMLAPALLSADLWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFTAIVHDSV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +    YR+E     +GL+R R F   DA+ F
Sbjct: 123 KSYKQLPLNLYQIQPKYRDEKR-PRNGLLRTREFIMKDAYSF 163


>gi|170078264|ref|YP_001734902.1| prolyl-tRNA synthetase [Synechococcus sp. PCC 7002]
 gi|226701348|sp|B1XP53|SYP_SYNP2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|169885933|gb|ACA99646.1| prolyl-tRNA synthetase [Synechococcus sp. PCC 7002]
          Length = 601

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 76/171 (44%), Gaps = 17/171 (9%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           ++E   H+ L R     +I   G G+  +    W++ Q +   +R ++     +E   PQ
Sbjct: 17  DAEIPSHKLLLRA---GYIRRIGRGIYAYLPLMWRVLQKVSQIVREEMNATGAQETLLPQ 73

Query: 299 VLDQHLWQQSGHWDSY---RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           +    +WQ+SG WD+Y      MF+++   D         L P +      +    ++SY
Sbjct: 74  LQPAEIWQESGRWDTYTQAEGIMFSLRDRLDG-----ELGLGPTHEEVITTIAKDMIRSY 128

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           R+LP  L +  + +R+E      GLMR R F   D + F   E    ECLK
Sbjct: 129 RQLPQHLYQIQTKFRDEIRPRF-GLMRGREFIMKDGYSFHASE----ECLK 174


>gi|254432589|ref|ZP_05046292.1| prolyl-tRNA synthetase [Cyanobium sp. PCC 7001]
 gi|197627042|gb|EDY39601.1| prolyl-tRNA synthetase [Cyanobium sp. PCC 7001]
          Length = 615

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 84/190 (44%), Gaps = 10/190 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINT--P 297
           E+E   H+ L R   +  I   GSG+  +    W++ + + + +R ++ D    + T  P
Sbjct: 17  EAEIPSHKLLLRAGYMRRI---GSGIYAYLPLLWRVLRKVSAIVREEL-DAIGALETLLP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           Q+    LWQ+SG W  Y      +   +D  +  R   L P +     A+    L+SYR+
Sbjct: 73  QMQPAELWQRSGRWSGYTDGEGIMFHLED--RQGRAMGLGPTHEEVVTALAADLLRSYRQ 130

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS-IYK 416
           LPV L +  + +R+E      GLMR R F   DA+ F   E          +   + I++
Sbjct: 131 LPVTLYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSFHADEASLRRTYAAMDRAYARIFR 189

Query: 417 DFGFEKIMVK 426
             G   + V+
Sbjct: 190 RCGLRALAVE 199


>gi|300715419|ref|YP_003740222.1| Prolyl-tRNA synthetase [Erwinia billingiae Eb661]
 gi|299061255|emb|CAX58364.1| Prolyl-tRNA synthetase [Erwinia billingiae Eb661]
          Length = 572

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 78/171 (45%), Gaps = 9/171 (5%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           TQYL    +    D   ++ ++ L    I +  SG+  W   G ++ + + + +R ++ +
Sbjct: 4   TQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREEMNN 63

Query: 290 DYE-EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
               EI+ P V    LWQ+SG W+ Y   +       D     R F L P +      + 
Sbjct: 64  AGAIEISMPVVQPADLWQESGRWEQYGPELLRFVDRGD-----RPFVLGPTHEEVVTDLI 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQ 399
            + L SY++LP+ + +  + +R+E      G+MR R F   DA+ F   ++
Sbjct: 119 RNELSSYKQLPLNVFQIQTKFRDEVRPRF-GVMRSREFIMKDAYSFHASQE 168


>gi|225849003|ref|YP_002729167.1| prolyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225644474|gb|ACN99524.1| prolyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 563

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/170 (21%), Positives = 84/170 (49%), Gaps = 14/170 (8%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            +G+  +   G+++ + + + +R+++ +    E+  P +    LW+++G WD Y   +F 
Sbjct: 36  AAGIYEYLPLGFRVLKKIENIIRKRMDEAGALELLLPILTPAELWKETGRWDVYGKELFR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +K   D       FAL P +      +    ++SY++LP+   +  + +R+E +   +GL
Sbjct: 96  LKDRKDA-----DFALGPTHEETITDLVRKNVRSYKDLPLNFYQIQTKFRDE-ARPRYGL 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKIHNLII----SIYKDFGFEKIMVK 426
           +R R F   D + F   E+   + +K + ++      I++D   + +MV+
Sbjct: 150 IRGREFIMKDGYSFDVSEE---DAIKTYEVMKETYHKIFQDLKLDYLMVE 196


>gi|71906284|ref|YP_283871.1| prolyl-tRNA synthetase [Dechloromonas aromatica RCB]
 gi|114152186|sp|Q47ID0|SYP_DECAR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|71845905|gb|AAZ45401.1| Prolyl-tRNA synthetase, bacterial [Dechloromonas aromatica RCB]
          Length = 576

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/166 (24%), Positives = 76/166 (45%), Gaps = 9/166 (5%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           +Q+ +   +    D   ++++M L   +I    +G+  W   G ++ + + + +R ++ +
Sbjct: 4   SQFFFTTLKEAPADAEVISQKMMLRAGYIKRAAAGIYTWMPLGLRVLRKVENIVREEMNN 63

Query: 290 DYE-EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
               E+  P V    LWQ+SG W+ Y   +   K      +  R F + P +      V 
Sbjct: 64  AGALELLMPAVQPAELWQESGRWEQYGPELLRFKD-----RHQREFVIGPTHEEVITDVV 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
              +KSYR+LP+ L +  + +R+E      G+MR R F   D + F
Sbjct: 119 RRDVKSYRQLPIHLYQIQTKFRDEIRPRF-GVMRGREFLMKDGYSF 163


>gi|331007686|ref|ZP_08330821.1| Prolyl-tRNA synthetase [gamma proteobacterium IMCC1989]
 gi|330418506|gb|EGG93037.1| Prolyl-tRNA synthetase [gamma proteobacterium IMCC1989]
          Length = 579

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/161 (23%), Positives = 70/161 (43%), Gaps = 8/161 (4%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG+  W   G ++ + +   +R ++ K   +E+  P V    LWQ+SG W  Y   +  +
Sbjct: 37  SGLYTWMPLGLRVLRKVEHIIREEMNKSGAQEVLMPVVQPAELWQESGRWQEYGPELLRI 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           K      +  R F L P +      +  + + SY++LP    +  + +R+E      G+M
Sbjct: 97  K-----DRHQREFCLGPTHEEVITDLVRNDVNSYKQLPANFYQIQTKFRDEIRPRF-GIM 150

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLKI-HNLIISIYKDFGFE 421
           R R F   DA+ F   +    +   + H    +I+   G +
Sbjct: 151 RSREFIMKDAYSFHIDQASLQDTYDVMHQTYCNIFDRIGLD 191


>gi|164687684|ref|ZP_02211712.1| hypothetical protein CLOBAR_01326 [Clostridium bartlettii DSM
           16795]
 gi|164603458|gb|EDQ96923.1| hypothetical protein CLOBAR_01326 [Clostridium bartlettii DSM
           16795]
          Length = 552

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/250 (22%), Positives = 113/250 (45%), Gaps = 19/250 (7%)

Query: 24  SDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSCAHIMA 82
           SD+A+    + +       +N  V +L+  ++E S I+ +  ++P  L V   +   +  
Sbjct: 25  SDIAKDFENNYSGYISLAVVNNDVQELNTYIKEDSDIKFLDTKNPDGLRVYTRTLNLVFI 84

Query: 83  EAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLS 142
            A + ++ + +V I   + +G Y +    +  + +++++I+ KM +IIA+D    K   +
Sbjct: 85  MACKCLFKDSRVVIEHSLSNGVYCEIYLGRDITEEDISKIKDKMDKIIAKDYDINKNIYT 144

Query: 143 HEKARELFESKKEAYKVEILESIPAKEN--VTLYRQGEWFDLCRGPHVRSTGQVKKFFKL 200
            ++A E+F+S     K E+   I  KEN  V +Y+   + D   G  + STG +K +   
Sbjct: 145 KKEAIEIFKSIGLDEKAEL---IKYKENDIVKIYKCNNYIDHFYGYLMPSTGYIKSYDLF 201

Query: 201 MKVAGAYWRGDSN-----------RPMLSRIYGTA--WNTQQELTQYLYFLEESEKRDHR 247
               G      S            +P L+ IY  A  W+    + + L   +  E++ + 
Sbjct: 202 KYRNGVILMAASEDDKHIPKKFVPQPKLANIYKEAEEWSNLMGVDKVLSLNKIIEEKKYG 261

Query: 248 KLAREMDLFH 257
           ++ R ++  H
Sbjct: 262 EIIRIVEALH 271


>gi|332359309|gb|EGJ37130.1| proline--tRNA ligase [Streptococcus sanguinis SK49]
          Length = 616

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     A+    +
Sbjct: 68  EMLAPALLSADLWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFTAIVRDSV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +    YR+E     +GL+R R F   DA+ F
Sbjct: 123 KSYKQLPLNLYQIQPKYRDEKR-PRNGLLRTREFIMKDAYSF 163


>gi|107021665|ref|YP_619992.1| prolyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
 gi|123072438|sp|Q1BZD6|SYP_BURCA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|105891854|gb|ABF75019.1| prolyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
          Length = 578

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 58/130 (44%), Gaps = 7/130 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P V    LWQ+SG W+ Y   +   K   D       F + P +      +  + +
Sbjct: 68  ELLMPAVQPAELWQESGRWEQYGPELLRFKDRKDN-----DFVIGPTHEEVVTDIARNQI 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLI 411
           KSYR++PV   +  + +R+E      G+MR R F   DA+ F       NE   K+++  
Sbjct: 123 KSYRQMPVNFYQIQTKFRDEIRPRF-GVMRGREFIMKDAYSFDKDAAGLNESYRKMYDAY 181

Query: 412 ISIYKDFGFE 421
           + I+   G E
Sbjct: 182 VRIFTRLGLE 191


>gi|262283493|ref|ZP_06061259.1| prolyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
 gi|262260984|gb|EEY79684.1| prolyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
          Length = 616

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 54/102 (52%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  ++F +K  + +      F L P +     A+    +
Sbjct: 68  EMLAPALLSADLWRESGRYETYGDDLFKLKNREGS-----DFILGPTHEETFTALVRDSV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +    YR+E     +GL+R R F   DA+ F
Sbjct: 123 KSYKQLPLNLYQIQPKYRDEKR-PRNGLLRTREFIMKDAYSF 163


>gi|269119306|ref|YP_003307483.1| prolyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
 gi|268613184|gb|ACZ07552.1| prolyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
          Length = 571

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 81/166 (48%), Gaps = 10/166 (6%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
           +E+E   H+ + R   +  +A   SGV  +   G ++ + + + +R ++ K   +E+  P
Sbjct: 16  KEAEVISHKLMLRASMIKRLA---SGVYSYLPLGNRVLKKVENIVREEMDKSGAQEVFMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW++SG W +Y   +  +K   +     R FAL P +      +  + + SY++
Sbjct: 73  VLQPADLWKESGRWIAYGPELMRMKDRHE-----REFALGPTHEEVVTDIVRNEINSYKD 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE 403
           LP+ L +  + +R+E      GLMR R F   DA+ F T  +  +E
Sbjct: 128 LPMNLYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSFHTTHESLDE 172



 Score = 40.8 bits (94), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 41/164 (25%), Positives = 77/164 (46%), Gaps = 16/164 (9%)

Query: 487 IGRDWQCGTIQVDFNLPSRFN-AFYVNSHSEKCHPVMIHRAVFG-SIERFIGIMIE-NFK 543
           I R  + G I   F L ++++ A   N   E      +    +G  + R +   IE N+ 
Sbjct: 406 IARGIEVGHI---FELGTKYSEAMKANVLDENGKQATLKMGCYGIGVSRIMSAAIEQNYD 462

Query: 544 GNLPLW---LSP--IQAIVTTITS-SAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
            N  +W   ++P  +  I+  I     V  A+++  LLK H++ +  D R+E   +K ++
Sbjct: 463 ENGIIWPVNIAPYEVDVIIPNIKDKDQVRVAEDVYQLLKDHNIDVILDDRDERAGFKFKD 522

Query: 598 HSIKKIPIIIICGDKEASERSIGI--RRFGSTTTQKV-SLLDAI 638
             +   P+ II G K  +E  + +  R+ G+T   ++ +LLD +
Sbjct: 523 ADLIGFPMKIITG-KSIAEGKVEVKDRKTGNTEIVEIGTLLDYV 565


>gi|206561773|ref|YP_002232538.1| prolyl-tRNA synthetase [Burkholderia cenocepacia J2315]
 gi|226699125|sp|B4E5W6|SYP_BURCJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|198037815|emb|CAR53759.1| prolyl-tRNA synthetase [Burkholderia cenocepacia J2315]
          Length = 578

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 58/130 (44%), Gaps = 7/130 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P V    LWQ+SG W+ Y   +   K   D       F + P +      +  + +
Sbjct: 68  ELLMPAVQPAELWQESGRWEQYGPELLRFKDRKDN-----DFVIGPTHEEVVTDIARNQI 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLI 411
           KSYR++PV   +  + +R+E      G+MR R F   DA+ F       NE   K+++  
Sbjct: 123 KSYRQMPVNFYQIQTKFRDEIRPRF-GVMRGREFIMKDAYSFDKDAAGLNESYRKMYDAY 181

Query: 412 ISIYKDFGFE 421
           + I+   G E
Sbjct: 182 VRIFSRLGLE 191


>gi|218698853|ref|YP_002406482.1| prolyl-tRNA synthetase [Escherichia coli IAI39]
 gi|226701079|sp|B7NKX8|SYP_ECO7I RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|218368839|emb|CAR16587.1| prolyl-tRNA synthetase [Escherichia coli IAI39]
          Length = 572

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 67/144 (46%), Gaps = 7/144 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E+  P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVLMPVVQPADLWQESGRWEQYGPELL- 94

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +  D   +  R F L P +      +  + L SY++LP+   +  + +R+E      G+
Sbjct: 95  -RFVD---RGERPFVLGPTHEEVITDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNEC 404
           MR R F   DA+ F T ++   E 
Sbjct: 150 MRSREFLMKDAYSFHTSQESLQET 173


>gi|300938604|ref|ZP_07153336.1| prolyl-tRNA synthetase [Escherichia coli MS 21-1]
 gi|331645338|ref|ZP_08346449.1| proline--tRNA ligase [Escherichia coli M605]
 gi|281177420|dbj|BAI53750.1| prolyl-tRNA synthetase [Escherichia coli SE15]
 gi|300456450|gb|EFK19943.1| prolyl-tRNA synthetase [Escherichia coli MS 21-1]
 gi|330910045|gb|EGH38555.1| prolyl-tRNA synthetase [Escherichia coli AA86]
 gi|331046095|gb|EGI18214.1| proline--tRNA ligase [Escherichia coli M605]
          Length = 572

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 67/144 (46%), Gaps = 7/144 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E+  P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVLMPVVQPADLWQESGRWEQYGPELL- 94

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +  D   +  R F L P +      +  + L SY++LP+   +  + +R+E      G+
Sbjct: 95  -RFVD---RGERPFVLGPTHEEVITDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNEC 404
           MR R F   DA+ F T ++   E 
Sbjct: 150 MRSREFLMKDAYSFHTSQESLQET 173


>gi|171316236|ref|ZP_02905459.1| prolyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
 gi|171098650|gb|EDT43447.1| prolyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
          Length = 578

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 58/130 (44%), Gaps = 7/130 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P V    LWQ+SG W+ Y   +   K   D       F + P +      +  + +
Sbjct: 68  ELLMPAVQPAELWQESGRWEQYGPELLRFKDRKDN-----DFVIGPTHEEVVTDIARNQI 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLI 411
           KSYR++PV   +  + +R+E      G+MR R F   DA+ F       NE   K+++  
Sbjct: 123 KSYRQMPVNFYQIQTKFRDEIRPRF-GVMRGREFIMKDAYSFDKDTAGLNESYRKMYDAY 181

Query: 412 ISIYKDFGFE 421
           + I+   G E
Sbjct: 182 VRIFTRLGLE 191


>gi|154249367|ref|YP_001410192.1| prolyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
 gi|171769336|sp|A7HKV2|SYP_FERNB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|154153303|gb|ABS60535.1| prolyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
          Length = 574

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 64/138 (46%), Gaps = 7/138 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           EI  P +    LW+QSG W+ Y   M  +K      +  R F L P +      +  + L
Sbjct: 68  EILMPIIQPAELWKQSGRWEDYGPEMMKLKD-----RHGRDFTLGPTHEELVTFLVQNEL 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
            SY++LP+ L +  + YR+E      G++R R F   D + F +  +  +E  K H    
Sbjct: 123 NSYKQLPITLYQMANKYRDEIRPRF-GVLRAREFIMKDGYSFHSDWESLDETYKAHRKAY 181

Query: 413 S-IYKDFGFEKIMVKLST 429
           S I +  G +  +V+ S+
Sbjct: 182 SNIMERIGLKYAVVEASS 199


>gi|116688611|ref|YP_834234.1| prolyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
 gi|170731910|ref|YP_001763857.1| prolyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
 gi|152016591|sp|A0K4B4|SYP_BURCH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226699124|sp|B1JVA5|SYP_BURCC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|116646700|gb|ABK07341.1| prolyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
 gi|169815152|gb|ACA89735.1| prolyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
          Length = 578

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 58/130 (44%), Gaps = 7/130 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P V    LWQ+SG W+ Y   +   K   D       F + P +      +  + +
Sbjct: 68  ELLMPAVQPAELWQESGRWEQYGPELLRFKDRKDN-----DFVIGPTHEEVVTDIARNQI 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLI 411
           KSYR++PV   +  + +R+E      G+MR R F   DA+ F       NE   K+++  
Sbjct: 123 KSYRQMPVNFYQIQTKFRDEIRPRF-GVMRGREFIMKDAYSFDKDAAGLNESYRKMYDAY 181

Query: 412 ISIYKDFGFE 421
           + I+   G E
Sbjct: 182 VRIFTRLGLE 191


>gi|332359971|gb|EGJ37785.1| proline--tRNA ligase [Streptococcus sanguinis SK1056]
          Length = 616

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     A+    +
Sbjct: 68  EMLAPALLSADLWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFTAIVRDSV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +    YR+E     +GL+R R F   DA+ F
Sbjct: 123 KSYKQLPLNLYQIQPKYRDEKR-PRNGLLRTREFIMKDAYSF 163


>gi|322386937|ref|ZP_08060561.1| proline--tRNA ligase [Streptococcus cristatus ATCC 51100]
 gi|321269219|gb|EFX52155.1| proline--tRNA ligase [Streptococcus cristatus ATCC 51100]
          Length = 616

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     A+    +
Sbjct: 68  EMLAPALLSADLWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFTAIVRDSV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +    YR+E     +GL+R R F   DA+ F
Sbjct: 123 KSYKQLPLNLYQIQPKYRDEKR-PRNGLLRTREFIMKDAYSF 163


>gi|262197045|ref|YP_003268254.1| prolyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
 gi|262080392|gb|ACY16361.1| prolyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
          Length = 584

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 64/138 (46%), Gaps = 7/138 (5%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           +GV  +   GW++ + + + +R ++     +E+  P  +   LWQ+SG W  Y   +   
Sbjct: 37  AGVYTFLPLGWRVIRKIENIVREEMDAAGAQEVLMPAAIPGELWQESGRWSKYGPELL-- 94

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           +  D    D   F   P +    V +     KSYRELP+ L +  S +R+E      GLM
Sbjct: 95  RFQDRKGAD---FCFGPTHEEVVVDMVRRDTKSYRELPLTLYQIQSKFRDELR-PRAGLM 150

Query: 382 RVRGFTQDDAHVFCTKEQ 399
           R R F   DA+ F   E+
Sbjct: 151 RGREFIMKDAYSFDVSEE 168


>gi|257467949|ref|ZP_05632045.1| prolyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
 gi|317062235|ref|ZP_07926720.1| prolyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
 gi|313687911|gb|EFS24746.1| prolyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
          Length = 569

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 85/185 (45%), Gaps = 11/185 (5%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
           +E+E   H+ L R      I +  SGV  +   G+K  + + + +R ++ +   +EI  P
Sbjct: 16  KEAETASHKLLLRAS---MIKKLTSGVYTYLPLGYKALKKVENIVREEMDRAGSQEILMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW++SG WD     M  ++      ++ R F L P +      +  + + SY+ 
Sbjct: 73  VLQPAELWKESGRWDVMGPLMMKLQD-----RNKRDFVLGPTHEEVVTDLIRNDISSYKA 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYK 416
           LP+ L +  + +R+E      GLMR R F   DA+ F  T E +  E L + +    I+ 
Sbjct: 128 LPLSLYQIQTKFRDEIRPRF-GLMRGREFVMKDAYSFHATAESLDEEFLNMRDTYSRIFS 186

Query: 417 DFGFE 421
             G +
Sbjct: 187 RCGLK 191


>gi|170699968|ref|ZP_02890995.1| prolyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
 gi|170135116|gb|EDT03417.1| prolyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
          Length = 578

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 58/130 (44%), Gaps = 7/130 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P V    LWQ+SG W+ Y   +   K   D       F + P +      +  + +
Sbjct: 68  ELLMPAVQPAELWQESGRWEQYGPELLRFKDRKDN-----DFVIGPTHEEVVTDIARNQI 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLI 411
           KSYR++PV   +  + +R+E      G+MR R F   DA+ F       NE   K+++  
Sbjct: 123 KSYRQMPVNFYQIQTKFRDEIRPRF-GVMRGREFIMKDAYSFDKDTAGLNESYRKMYDAY 181

Query: 412 ISIYKDFGFE 421
           + I+   G E
Sbjct: 182 VRIFTRLGLE 191


>gi|325686585|gb|EGD28611.1| proline--tRNA ligase [Streptococcus sanguinis SK72]
 gi|325697433|gb|EGD39319.1| proline--tRNA ligase [Streptococcus sanguinis SK160]
          Length = 616

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     A+    +
Sbjct: 68  EMLAPALLSADLWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFTAIVRDSV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +    YR+E     +GL+R R F   DA+ F
Sbjct: 123 KSYKQLPLNLYQIQPKYRDEKR-PRNGLLRTREFIMKDAYSF 163


>gi|114563918|ref|YP_751432.1| prolyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
 gi|122299171|sp|Q07ZH1|SYP_SHEFN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|114335211|gb|ABI72593.1| prolyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
          Length = 571

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 73/165 (44%), Gaps = 8/165 (4%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I  + SG+  W   G ++ + + + +R ++ K    EI  P V    LW ++G WD +  
Sbjct: 32  IRRNASGLYTWLPSGLRVLRKVEAIVREEMNKTGAIEILMPLVQPADLWVETGRWDKFGP 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            +   +  ++     R F L P +      +    L SY++LP+ L +  + +R+E    
Sbjct: 92  ELLRFQDRNN-----RDFVLGPTHEEVITDLVRKELSSYKQLPLTLYQVQTKFRDEVRPR 146

Query: 377 LHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGF 420
             G+MR R F   DA+ F   +E M N    +H    +I    G 
Sbjct: 147 F-GVMRAREFLMKDAYSFHLDQETMDNTYHAMHTAYSNILTRMGL 190


>gi|323350534|ref|ZP_08086196.1| proline--tRNA ligase [Streptococcus sanguinis VMC66]
 gi|322123216|gb|EFX94901.1| proline--tRNA ligase [Streptococcus sanguinis VMC66]
          Length = 616

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     A+    +
Sbjct: 68  EMLAPALLSADLWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFTAIVRDSV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +    YR+E     +GL+R R F   DA+ F
Sbjct: 123 KSYKQLPLNLYQIQPKYRDEKR-PRNGLLRTREFIMKDAYSF 163


>gi|325688976|gb|EGD30984.1| proline--tRNA ligase [Streptococcus sanguinis SK115]
          Length = 616

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     A+    +
Sbjct: 68  EMLAPALLSADLWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFTAIVRDSV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +    YR+E     +GL+R R F   DA+ F
Sbjct: 123 KSYKQLPLNLYQIQPKYRDEKR-PRNGLLRTREFIMKDAYSF 163


>gi|172059576|ref|YP_001807228.1| prolyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
 gi|226699123|sp|B1YSV1|SYP_BURA4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|171992093|gb|ACB63012.1| prolyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
          Length = 578

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 58/130 (44%), Gaps = 7/130 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P V    LWQ+SG W+ Y   +   K   D       F + P +      +  + +
Sbjct: 68  ELLMPAVQPAELWQESGRWEQYGPELLRFKDRKDN-----DFVIGPTHEEVVTDIARNQI 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLI 411
           KSYR++PV   +  + +R+E      G+MR R F   DA+ F       NE   K+++  
Sbjct: 123 KSYRQMPVNFYQIQTKFRDEIRPRF-GVMRGREFIMKDAYSFDKDTAGLNESYRKMYDAY 181

Query: 412 ISIYKDFGFE 421
           + I+   G E
Sbjct: 182 VRIFTRLGLE 191


>gi|78065148|ref|YP_367917.1| prolyl-tRNA synthetase [Burkholderia sp. 383]
 gi|114152177|sp|Q39JU3|SYP_BURS3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|77965893|gb|ABB07273.1| Prolyl-tRNA synthetase [Burkholderia sp. 383]
          Length = 578

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 58/130 (44%), Gaps = 7/130 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P V    LWQ+SG W+ Y   +   K   D       F + P +      +  + +
Sbjct: 68  ELLMPAVQPAELWQESGRWEQYGPELLRFKDRKDN-----DFVIGPTHEEVITDIARNQI 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLI 411
           KSYR++PV   +  + +R+E      G+MR R F   DA+ F       NE   K+++  
Sbjct: 123 KSYRQMPVNFYQIQTKFRDEIRPRF-GVMRGREFIMKDAYSFDKDAAGLNESYRKMYDAY 181

Query: 412 ISIYKDFGFE 421
           + I+   G E
Sbjct: 182 VRIFTRLGLE 191


>gi|324989750|gb|EGC21693.1| proline--tRNA ligase [Streptococcus sanguinis SK353]
          Length = 616

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     A+    +
Sbjct: 68  EMLAPALLSADLWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFTAIVRDSV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +    YR+E     +GL+R R F   DA+ F
Sbjct: 123 KSYKQLPLNLYQIQPKYRDEKR-PRNGLLRTREFIMKDAYSF 163


>gi|114152266|sp|Q2LTR7|SYP_SYNAS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
          Length = 578

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 66/138 (47%), Gaps = 7/138 (5%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           +G+  +   G+++ + +   +R ++ +   +E+  P V    LWQ+SG W+ Y   +   
Sbjct: 37  AGIYSYLPLGYRVLRKVEQIIREEMNRAGAQEVYLPMVQPAELWQESGRWEHYGKELLRF 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           +   D     R + L P +      +  H +K+YR+LP  L +  + +R+E      G+M
Sbjct: 97  RDRHD-----REYCLGPTHEEVITDLVRHEIKTYRQLPKNLYQIQTKFRDEIRPRF-GVM 150

Query: 382 RVRGFTQDDAHVFCTKEQ 399
           R R F   DA+ F   E+
Sbjct: 151 RGREFGMKDAYSFDADEE 168


>gi|332365115|gb|EGJ42878.1| proline--tRNA ligase [Streptococcus sanguinis SK1059]
          Length = 616

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     A+    +
Sbjct: 68  EMLAPALLSADLWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFTAIVRDSV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +    YR+E     +GL+R R F   DA+ F
Sbjct: 123 KSYKQLPLNLYQIQPKYRDEKR-PRNGLLRTREFIMKDAYSF 163


>gi|324992477|gb|EGC24398.1| proline--tRNA ligase [Streptococcus sanguinis SK405]
 gi|324995993|gb|EGC27904.1| proline--tRNA ligase [Streptococcus sanguinis SK678]
 gi|327460709|gb|EGF07044.1| proline--tRNA ligase [Streptococcus sanguinis SK1]
 gi|327472430|gb|EGF17861.1| proline--tRNA ligase [Streptococcus sanguinis SK408]
          Length = 616

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     A+    +
Sbjct: 68  EMLAPALLSADLWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFTAIVRDSV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +    YR+E     +GL+R R F   DA+ F
Sbjct: 123 KSYKQLPLNLYQIQPKYRDEKR-PRNGLLRTREFIMKDAYSF 163


>gi|115350544|ref|YP_772383.1| prolyl-tRNA synthetase [Burkholderia ambifaria AMMD]
 gi|122324080|sp|Q0BIH4|SYP_BURCM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|115280532|gb|ABI86049.1| prolyl-tRNA synthetase [Burkholderia ambifaria AMMD]
          Length = 578

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 58/130 (44%), Gaps = 7/130 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P V    LWQ+SG W+ Y   +   K   D       F + P +      +  + +
Sbjct: 68  ELLMPAVQPAELWQESGRWEQYGPELLRFKDRKDN-----DFVIGPTHEEVVTDIARNQI 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLI 411
           KSYR++PV   +  + +R+E      G+MR R F   DA+ F       NE   K+++  
Sbjct: 123 KSYRQMPVNFYQIQTKFRDEIRPRF-GVMRGREFLMKDAYSFDKDTAGLNESYRKMYDAY 181

Query: 412 ISIYKDFGFE 421
           + I+   G E
Sbjct: 182 VRIFTRLGLE 191


>gi|328944571|gb|EGG38732.1| proline--tRNA ligase [Streptococcus sanguinis SK1087]
          Length = 616

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     A+    +
Sbjct: 68  EMLAPALLSADLWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFTAIVRDSV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +    YR+E     +GL+R R F   DA+ F
Sbjct: 123 KSYKQLPLNLYQIQPKYRDEKR-PRNGLLRTREFIMKDAYSF 163


>gi|302348192|ref|YP_003815830.1| Prolyl-tRNA synthetase [Acidilobus saccharovorans 345-15]
 gi|302328604|gb|ADL18799.1| Prolyl-tRNA synthetase [Acidilobus saccharovorans 345-15]
          Length = 482

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 89/402 (22%), Positives = 174/402 (43%), Gaps = 71/402 (17%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVL-DQHLWQQSGHWDSYRANMFAV 321
           G+  W   G++I + +   +R+ + +  +EE+  P ++ D  L ++S H   +   ++ V
Sbjct: 36  GMGVWMPYGFQIRRRVTDLLRKLLDETGHEEVLFPLLIPDWMLAKESEHVKGFEDEVYWV 95

Query: 322 KCADDTIKDL-RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
                 +++L +  AL+P +        +  ++SY++LP +  +  SV+R E + +   L
Sbjct: 96  THGG--LEELDQKLALRPTSETPITYYESLWVQSYKQLPRKFYQIVSVFRYE-TKATRPL 152

Query: 381 MRVRGFTQ-DDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK--LSTRPEKRVGS 437
           +RVR  +   +AH   T  + F +        I +Y+ F F+ + +   +S RP+     
Sbjct: 153 IRVREISMFKEAH---TVHESFEDAESQVKEAIDVYRKF-FDSLGIPYIISRRPD----- 203

Query: 438 DALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ 497
              WD                             GA Y   F+ ++ D  GR  Q GT+ 
Sbjct: 204 ---WDKF--------------------------AGALYTIAFDTVMPD--GRTLQIGTVH 232

Query: 498 VDFNLPSRFN---AFYVNSHSEKC-HPVMIHRAVFGSIERFIGIMI----ENFKGNLPLW 549
              NL   F    +F + +  EK  +P    +  +G  +R +  +I    ++    LP  
Sbjct: 233 ---NLGQNFTKAFSFRIQTRDEKFDYP---WQTSYGVSDRVVATLIAIHGDDMGLVLPPD 286

Query: 550 LSPIQAIVTTITSSA-------VEYAQEIANLLKSHHLSIETDFRNETI-NYKIREHSIK 601
           ++P QA++  I S +       +EY++ + + L S  +  + D R +T    K      K
Sbjct: 287 IAPTQAVIIPIPSQSEEDSRKVLEYSRGVLSTLLSSGIRAKLDDREDTTPGDKYYYWDAK 346

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +P+ +  G +EAS  ++ I R  +   + V L +A+  + K
Sbjct: 347 GVPVRVEIGPREASGNTVTIVRRDTLEKRTVPLSEAVGSIKK 388


>gi|170748459|ref|YP_001754719.1| prolyl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831]
 gi|226701311|sp|B1LUL8|SYP_METRJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|170654981|gb|ACB24036.1| prolyl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831]
          Length = 441

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/205 (23%), Positives = 86/205 (41%), Gaps = 20/205 (9%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTP 297
           +E+E   HR + R      + ++ +G+  W   G ++ + + + +RR + +    EI  P
Sbjct: 16  KEAEIVSHRLMLRAG---LVRQEAAGIYAWLPLGLRVLERVCAVIRREQDRSGAVEILMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            V    LW++SG +D+Y   M  +K   D     R     P        +F   ++SY++
Sbjct: 73  TVQSAELWRESGRYDAYGKEMLRLKDRHD-----REMLYGPTAEEMVTEIFRASVRSYKD 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF----CTKEQMFNECLKIHNLIIS 413
           LP  L +    +R+E      G MR R F   DA+ F          +N     +   + 
Sbjct: 128 LPKNLYQISWKFRDEVRPRF-GTMRSREFLMKDAYSFDFDQAGARHAYNRMFVAY---LR 183

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSD 438
            +   G + I ++  T P   +G D
Sbjct: 184 TFAGLGLKAIPMRADTGP---IGGD 205


>gi|15896426|ref|NP_349775.1| prolyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|81854743|sp|Q97ED5|SYP_CLOAB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|15026247|gb|AAK81115.1|AE007813_2 Prolyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|325510583|gb|ADZ22219.1| prolyl-tRNA synthetase [Clostridium acetobutylicum EA 2018]
          Length = 570

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 73/156 (46%), Gaps = 10/156 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E   H+ + R   +  +A   SGV  +   G K  + + + +R ++     +E     
Sbjct: 17  EAEIESHKLMLRSGMIRKMA---SGVYNYMPLGLKALKKVENIIREEMNAAGAQEFLASA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L   LW++SG W+ +   MF +K  ++     R F L P +           +KSY++L
Sbjct: 74  LLPSELWKESGRWEVFGPEMFKLKDRNE-----REFCLGPTHEEVFTDFARSEIKSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           PV L +  + YR+E      G++R R F   DA+ F
Sbjct: 129 PVNLYQIQTKYRDERRPRF-GMIRSREFVMKDAYSF 163


>gi|325695492|gb|EGD37392.1| proline--tRNA ligase [Streptococcus sanguinis SK150]
          Length = 616

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     A+    +
Sbjct: 68  EMLAPALLSADLWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFTAIVRDSV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +    YR+E     +GL+R R F   DA+ F
Sbjct: 123 KSYKQLPLNLYQIQPKYRDEKR-PRNGLLRTREFIMKDAYSF 163


>gi|225867815|ref|YP_002743763.1| prolyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus]
 gi|259511619|sp|C0MFA1|SYP_STRS7 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|225701091|emb|CAW97925.1| prolyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus]
          Length = 618

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 53/102 (51%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  +++ +K      +D   F L P +      +    +
Sbjct: 68  EMLAPALLTADLWRESGRYETYGEDLYKLKN-----RDKSDFILGPTHEETFTTLVRDAV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +  S YR+E     +GL+R R F   D + F
Sbjct: 123 KSYKQLPLNLYQIQSKYRDEKR-PRNGLLRTREFIMKDGYSF 163


>gi|225871275|ref|YP_002747222.1| prolyl-tRNA synthetase [Streptococcus equi subsp. equi 4047]
 gi|254782916|sp|C0M9E6|SYP_STRE4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|225700679|emb|CAW95268.1| prolyl-tRNA synthetase [Streptococcus equi subsp. equi 4047]
          Length = 618

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 53/102 (51%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  +++ +K      +D   F L P +      +    +
Sbjct: 68  EMLAPALLTADLWRESGRYETYGEDLYKLKN-----RDKSDFILGPTHEETFTTLVRDAV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +  S YR+E     +GL+R R F   D + F
Sbjct: 123 KSYKQLPLNLYQIQSKYRDEKR-PRNGLLRTREFIMKDGYSF 163


>gi|114799658|ref|YP_760468.1| prolyl-tRNA synthetase [Hyphomonas neptunium ATCC 15444]
 gi|123323241|sp|Q0C1C5|SYP_HYPNA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|114739832|gb|ABI77957.1| prolyl-tRNA synthetase [Hyphomonas neptunium ATCC 15444]
          Length = 439

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 82/183 (44%), Gaps = 11/183 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I ++G+G+  W   G+++ + +   +R ++ +    E+  P +    LW++SG +D Y  
Sbjct: 32  IRQNGAGIYSWLPLGYRVLKRIEQIVREEMNRAGAIEMLMPTLQQADLWRESGRYDDYGK 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  +K   +     R     P N      VF   +KSY++LP+ L      +R+E    
Sbjct: 92  EMLRIKDRHE-----RDMLYGPTNEELITDVFRTYVKSYKQLPLNLYHQQWKFRDEVRPR 146

Query: 377 LHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
             G+MR R F   DA+ F  T+E       K+    ++ +   G   I ++  T P   +
Sbjct: 147 F-GVMRGREFLMKDAYSFDLTEEDARAAYRKMFCAYLNAFDRMGLTAIPMRADTGP---I 202

Query: 436 GSD 438
           G D
Sbjct: 203 GGD 205


>gi|327468388|gb|EGF13873.1| proline--tRNA ligase [Streptococcus sanguinis SK330]
          Length = 616

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     A+    +
Sbjct: 68  EMLAPALLSADLWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFTAIVRDSV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +    YR+E     +GL+R R F   DA+ F
Sbjct: 123 KSYKQLPLNLYQIQPKYRDEKR-PRNGLLRTREFIMKDAYSF 163


>gi|327194827|gb|EGE61661.1| prolyl-tRNA synthetase protein [Rhizobium etli CNPAF512]
          Length = 440

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/195 (24%), Positives = 82/195 (42%), Gaps = 11/195 (5%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTP 297
           +E+E   HR + R      I +   G+  W   G ++   + + +R  + +    E++ P
Sbjct: 16  KEAEIVSHRLMLRAG---MIRQQSQGIYSWLPLGKRVLDKVNAIIREEQNRAGAIELSMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LWQ+SG +D+Y   M  +       +  R     P N      +F   +KSY++
Sbjct: 73  TLQSAELWQESGRYDAYGKEMLRIND-----RQERPMLYGPTNEEMVTDIFRSSVKSYKD 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYK 416
           LP+ L      +R+E      G MR R F   DA+ F  T+E   +   K+    +  + 
Sbjct: 128 LPLNLYHIQLKFRDEIRPRF-GTMRSREFMMKDAYSFDLTREGAEHSYNKMFAAYLRTFD 186

Query: 417 DFGFEKIMVKLSTRP 431
             G   I ++  T P
Sbjct: 187 RLGLRAIPMRADTGP 201


>gi|260892490|ref|YP_003238587.1| prolyl-tRNA synthetase [Ammonifex degensii KC4]
 gi|260864631|gb|ACX51737.1| prolyl-tRNA synthetase [Ammonifex degensii KC4]
          Length = 574

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 74/156 (47%), Gaps = 10/156 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+E   HR L R   +  +A   +G+      G ++   + S +R ++ +   +EI  P 
Sbjct: 17  EAEVASHRLLLRAGFIRRVA---AGIYTLLPLGKRVLAKIESIVREEMNRAGGQEILMPI 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW +SG W+ Y   +F +K      +  R F L P +     A+    ++SY++L
Sbjct: 74  LQPAELWHRSGRWEVYGPELFRLKD-----RHGRDFCLGPTHEEMITALVAAEVRSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           P+ L + G+ YR+E      GL+R R F   D + F
Sbjct: 129 PLLLYQIGNKYRDERRPRF-GLLRGREFIMKDLYSF 163



 Score = 44.3 bits (103), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 61/133 (45%), Gaps = 16/133 (12%)

Query: 506 FNAFYVNSHSEK------CHPVMIHRAVFGSIERFIGIMIENFKGNL-PLWLSPIQAIVT 558
            NA+Y++   EK      C+ + I R +   +E+       + +G + PL ++P Q +V 
Sbjct: 421 LNAYYLDEKGEKRPIIMGCYGIGITRTMAAVVEQH-----HDEEGIIWPLAVAPFQVLVL 475

Query: 559 TITSSAV---EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEAS 615
            +    V   E A+EI NLL+   + +  D R E    K ++  +   P+ I  G   A 
Sbjct: 476 PVNYEEVPQREVAEEIYNLLREKGIEVLLDDREERPGVKFKDADLVGYPLRITVGRHAAE 535

Query: 616 ER-SIGIRRFGST 627
            +  + +RR G T
Sbjct: 536 GKVELKLRRTGET 548


>gi|195162813|ref|XP_002022248.1| GL25954 [Drosophila persimilis]
 gi|194104209|gb|EDW26252.1| GL25954 [Drosophila persimilis]
          Length = 334

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 74/272 (27%), Positives = 123/272 (45%), Gaps = 34/272 (12%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVC-DLSDPVREG-S 58
           +P D+ L   +     F       + A+ +S    +++    I+G V  D+  P++E  +
Sbjct: 66  LPEDVTLVMNNQISTPF-------NCAQHLSEGHCRRSALALIDGSVPWDMHRPLQESCT 118

Query: 59  IEIITPEDPRSLAVIR---HSCAHIMAEAVQSIW-PEVQVAI----GPIIEDG-FYYDFD 109
           ++++         V +    +C+ ++  A+  ++  E ++ +    GP I+ G F +D  
Sbjct: 119 LQLLNFNISEPHVVNKAFWRTCSFMLGAALTRVFKAEAKLQLHSFPGPNIKSGSFVHDIV 178

Query: 110 KE----QPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESI 165
            E    QP  S E+  I  +M ++ A+D    +  +  E A+E+F+  K  YK E L SI
Sbjct: 179 LETQSWQPTKS-EMRAISAEMIKLAAQDLRIERLDVQQELAQEMFKDSK--YKSEQLPSI 235

Query: 166 PAKEN--VTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRP-MLSRIYG 222
             + N  VTLYR G+  D+ RGP V ST     F     V  A+   D        RI G
Sbjct: 236 AQQSNGRVTLYRLGDHIDISRGPMVAST----HFLGKCTVGAAHKVADEGPAGAFYRIQG 291

Query: 223 TAWNTQQELTQYLY-FLEE-SEKRDHRKLARE 252
            A     +L    Y FLEE S+K +  +L  E
Sbjct: 292 VALPCGFKLNHVAYGFLEERSQKLNPARLPHE 323


>gi|282881204|ref|ZP_06289891.1| phosphoribulokinase/Uridine kinase family protein [Prevotella
           timonensis CRIS 5C-B1]
 gi|281305008|gb|EFA97081.1| phosphoribulokinase/Uridine kinase family protein [Prevotella
           timonensis CRIS 5C-B1]
          Length = 553

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/186 (22%), Positives = 89/186 (47%), Gaps = 4/186 (2%)

Query: 14  IKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAV 72
           IK+  + +T S+V +     +    +   +N KVC ++  +     +E +   +  +   
Sbjct: 15  IKDVAIGSTLSEVFDEFKLEMPFGPICAKVNNKVCGMNLCLYHNKDVEFLDMYNSSAQRN 74

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIAR 132
              +   I+ +AV  ++   +V I   + +G+Y +       S ++  +I ++MQ+II  
Sbjct: 75  YTRTLFFILCKAVHDLYAGSEVVIDIPVSNGYYINLKIGHEVSEEDAVRIRERMQQIIDA 134

Query: 133 DSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ-GEWFDLCRGPHVRST 191
             P ++  +  E+A ++FE K +  KV++L SI +    T+Y Q  ++ D   G  + +T
Sbjct: 135 KIPIVRYQVPTEEAIKMFEHKGDEAKVKLLRSIGSL--YTVYHQIDDYVDYYYGSLLPNT 192

Query: 192 GQVKKF 197
           G +  F
Sbjct: 193 GDIYLF 198


>gi|260889054|ref|ZP_05900317.1| proline--tRNA ligase [Leptotrichia hofstadii F0254]
 gi|260861114|gb|EEX75614.1| proline--tRNA ligase [Leptotrichia hofstadii F0254]
          Length = 570

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/176 (23%), Positives = 81/176 (46%), Gaps = 8/176 (4%)

Query: 256 FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSY 314
           F I +   GV  +   G+++ + + +  R ++ +   +E+  P +    LW++SG W +Y
Sbjct: 30  FMIKQLTRGVYTYLPFGYRVLKKIENITREEMDRAGAQELLMPVLQPASLWEESGRWFAY 89

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
              +  +K  ++     R F+L P +      +    + SY+ELP  + +  + +R+E  
Sbjct: 90  GPELMRLKDRNE-----REFSLGPTHEEVITDIVRDSISSYKELPFNVYQIQTKFRDEMR 144

Query: 375 GSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
               GLMR R F   D + F  T+E +  E L + +    I++  G     V+  T
Sbjct: 145 PRF-GLMRGREFVMKDGYSFHLTQESLDEEYLNMKDTYSRIFERMGLNYRAVEADT 199


>gi|188997600|ref|YP_001931851.1| prolyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
 gi|226701347|sp|B2V6W5|SYP_SULSY RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|188932667|gb|ACD67297.1| prolyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 564

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/166 (22%), Positives = 79/166 (47%), Gaps = 8/166 (4%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           +G+  +   G K+ + + + +R+ + D    E+  P +    LW+++G W  Y   +F +
Sbjct: 37  AGIYEYLPLGLKVLRKIENIIRKHMDDSGALEVLLPILTPAELWKETGRWHVYGKELFRL 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           K   D       FAL P +      +    ++SY++LP+   +  + +R+E +   +GL+
Sbjct: 97  KDRKDA-----EFALGPTHEETITDLVRKNVRSYKDLPLNFYQIQTKFRDE-ARPRYGLI 150

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLKIHNLII-SIYKDFGFEKIMVK 426
           R R F   D + F   E+   +  ++       I+K+ G + +MV+
Sbjct: 151 RGREFIMKDGYSFDVSEEDAKKTYEVMKEAYHKIFKELGLDYLMVE 196


>gi|77409695|ref|ZP_00786360.1| prolyl-tRNA synthetase [Streptococcus agalactiae COH1]
 gi|77171693|gb|EAO74897.1| prolyl-tRNA synthetase [Streptococcus agalactiae COH1]
          Length = 549

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 6/98 (6%)

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +L   LW++SG +++Y  +++ +K      +D   F L P +      +    +KSY+
Sbjct: 4   PALLTADLWRESGRYETYGEDLYKLKN-----RDQSDFILGPTHEETFTTLVRDAVKSYK 58

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           +LP+ L +  S YR+E     +GL+R R F   D + F
Sbjct: 59  QLPLNLYQIQSKYRDEKR-PRNGLLRTREFIMKDGYSF 95


>gi|198464350|ref|XP_001353187.2| GA14359 [Drosophila pseudoobscura pseudoobscura]
 gi|198149679|gb|EAL30689.2| GA14359 [Drosophila pseudoobscura pseudoobscura]
          Length = 334

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 74/272 (27%), Positives = 123/272 (45%), Gaps = 34/272 (12%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVC-DLSDPVREG-S 58
           +P D+ L   +     F       + A+ +S    +++    I+G V  D+  P++E  +
Sbjct: 66  LPEDVTLVMNNHISTPF-------NCAQHLSEGHCRRSALALIDGSVPWDMHRPLQESCT 118

Query: 59  IEIITPEDPRSLAVIR---HSCAHIMAEAVQSIW-PEVQVAI----GPIIEDG-FYYDFD 109
           ++++         V +    +C+ ++  A+  ++  E ++ +    GP I+ G F +D  
Sbjct: 119 LQLLNFNISEPHVVNKAFWRTCSFMLGAALTRVFKAEAKLQLHSFPGPNIKSGSFVHDIV 178

Query: 110 KE----QPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESI 165
            E    QP  S E+  I  +M ++ A+D    +  +  E A+E+F+  K  YK E L SI
Sbjct: 179 LETQSWQPTKS-EMRAISAEMIKLAAQDLRIERLDVQQELAQEMFKDSK--YKSEQLPSI 235

Query: 166 PAKEN--VTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRP-MLSRIYG 222
             + N  VTLYR G+  D+ RGP V ST     F     V  A+   D        RI G
Sbjct: 236 AQQSNGRVTLYRLGDHIDISRGPMVAST----HFLGKCTVGAAHKVADEGPAGAFYRIQG 291

Query: 223 TAWNTQQELTQYLY-FLEE-SEKRDHRKLARE 252
            A     +L    Y FLEE S+K +  +L  E
Sbjct: 292 VALPCGFKLNHVAYGFLEERSQKLNPARLPHE 323


>gi|85859447|ref|YP_461649.1| prolyl-tRNA synthetase [Syntrophus aciditrophicus SB]
 gi|85722538|gb|ABC77481.1| prolyl-tRNA synthetase [Syntrophus aciditrophicus SB]
          Length = 597

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 66/138 (47%), Gaps = 7/138 (5%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           +G+  +   G+++ + +   +R ++ +   +E+  P V    LWQ+SG W+ Y   +   
Sbjct: 56  AGIYSYLPLGYRVLRKVEQIIREEMNRAGAQEVYLPMVQPAELWQESGRWEHYGKELLRF 115

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           +   D     R + L P +      +  H +K+YR+LP  L +  + +R+E      G+M
Sbjct: 116 RDRHD-----REYCLGPTHEEVITDLVRHEIKTYRQLPKNLYQIQTKFRDEIRPRF-GVM 169

Query: 382 RVRGFTQDDAHVFCTKEQ 399
           R R F   DA+ F   E+
Sbjct: 170 RGREFGMKDAYSFDADEE 187


>gi|238796636|ref|ZP_04640143.1| Prolyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
 gi|238719614|gb|EEQ11423.1| Prolyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
          Length = 572

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 67/144 (46%), Gaps = 7/144 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E++ P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELL- 94

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +  D   +  R F L P +      +    + SY++LP+   +  + +R+E      G+
Sbjct: 95  -RFVD---RGERPFVLGPTHEEVITDLIRGEINSYKQLPLNFFQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNEC 404
           MR R F   DA+ F T ++   E 
Sbjct: 150 MRAREFLMKDAYSFHTTQESLQET 173


>gi|311068179|ref|YP_003973102.1| prolyl-tRNA synthetase [Bacillus atrophaeus 1942]
 gi|310868696|gb|ADP32171.1| prolyl-tRNA synthetase [Bacillus atrophaeus 1942]
          Length = 564

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 71/148 (47%), Gaps = 7/148 (4%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I ++ SGV  +    +K+ + + + +R ++ K +  E+  P +     WQ+SG W +Y  
Sbjct: 32  IRQNTSGVYSYMPLAYKVIKNIQTIVREELEKINAVEMLMPALQQAETWQESGRWYTYGP 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            +  +K      +  R FAL   +     ++    +KSY+ LP+ L +  S +R+E    
Sbjct: 92  ELMRLKD-----RHGREFALGATHEEVVTSLVRDEVKSYKRLPLTLYQIQSKFRDEKRPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             GL+R R F   DA+ F   E+  +E 
Sbjct: 147 F-GLLRGREFIMKDAYSFHASEESLDET 173


>gi|160937103|ref|ZP_02084466.1| hypothetical protein CLOBOL_01993 [Clostridium bolteae ATCC
           BAA-613]
 gi|158440004|gb|EDP17752.1| hypothetical protein CLOBOL_01993 [Clostridium bolteae ATCC
           BAA-613]
          Length = 556

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/198 (25%), Positives = 87/198 (43%), Gaps = 4/198 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIEII 62
           S + L    G  K +P   T  +VA    +      + V +NGK+ +L   V++  +  +
Sbjct: 5   SGMALVKIHGITKEYPEGTTWMEVAREHQKEYEYDILLVRVNGKLQELHKQVKDCELSFV 64

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV---AIGPIIEDGFYYDFDKEQPFSSDEL 119
           T +D   ++  + S + +M +A  S+     V    I   I  GF+ +       + + L
Sbjct: 65  TAKDKPGMSAYQRSASLMMLKAFYSVAGAGNVEKLMIDFSIGRGFFVEARGNFVLNQEFL 124

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             ++ KM+E + R  P +K+ +S + A ELFE K   Y    L        V +Y    +
Sbjct: 125 DAVKAKMREYVERKIPIMKRSVSTDDAIELFE-KLGMYDKARLFRYRMVSRVNIYSIDGF 183

Query: 180 FDLCRGPHVRSTGQVKKF 197
            D   G  V++TG +K F
Sbjct: 184 EDYYYGYMVQNTGYIKHF 201


>gi|149909734|ref|ZP_01898386.1| prolyl-tRNA synthetase [Moritella sp. PE36]
 gi|149807248|gb|EDM67203.1| prolyl-tRNA synthetase [Moritella sp. PE36]
          Length = 573

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/162 (24%), Positives = 74/162 (45%), Gaps = 8/162 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ K    E   P V    LWQ++G  D +   +  
Sbjct: 36  ASGLYTWLPTGLRVLRKVENIVREEMDKAGAVETLMPMVQPADLWQETGRIDKFGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +    +     R+F L P +      +    + SY++LP+ L +  + +R+E      G+
Sbjct: 96  INDRHN-----RSFVLGPTHEEVITDIARKEINSYKQLPLTLYQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFE 421
           MR R F   DA+ F   ++  N+   K+H    +I++  G E
Sbjct: 150 MRSREFLMKDAYSFHISDECLNDTYNKMHTAYCNIFERIGLE 191


>gi|123443459|ref|YP_001007432.1| prolyl-tRNA synthetase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|332160618|ref|YP_004297195.1| prolyl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica
           105.5R(r)]
 gi|152112962|sp|A1JP53|SYP_YERE8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|122090420|emb|CAL13288.1| prolyl-tRNA synthetase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|318606904|emb|CBY28402.1| prolyl-tRNA synthetase; Bacterial type [Yersinia enterocolitica
           subsp. palearctica Y11]
 gi|325664848|gb|ADZ41492.1| prolyl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica
           105.5R(r)]
 gi|330860908|emb|CBX71188.1| prolyl-tRNA synthetase [Yersinia enterocolitica W22703]
          Length = 572

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 67/144 (46%), Gaps = 7/144 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E++ P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELL- 94

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +  D   +  R F L P +      +    + SY++LP+   +  + +R+E      G+
Sbjct: 95  -RFVD---RGERPFVLGPTHEEVITDLIRGEINSYKQLPLNFFQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNEC 404
           MR R F   DA+ F T ++   E 
Sbjct: 150 MRAREFLMKDAYSFHTTQESLQET 173


>gi|238787209|ref|ZP_04631008.1| Prolyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
 gi|238724471|gb|EEQ16112.1| Prolyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
          Length = 572

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 67/144 (46%), Gaps = 7/144 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E++ P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELL- 94

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +  D   +  R F L P +      +    + SY++LP+   +  + +R+E      G+
Sbjct: 95  -RFVD---RGERPFVLGPTHEEVITDLIRGEINSYKQLPLNFFQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNEC 404
           MR R F   DA+ F T ++   E 
Sbjct: 150 MRAREFLMKDAYSFHTTQESLQET 173


>gi|238751425|ref|ZP_04612917.1| Prolyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
 gi|238710292|gb|EEQ02518.1| Prolyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
          Length = 572

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 67/144 (46%), Gaps = 7/144 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E++ P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELL- 94

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +  D   +  R F L P +      +    + SY++LP+   +  + +R+E      G+
Sbjct: 95  -RFVD---RGERPFVLGPTHEEVITDLIRGEINSYKQLPLNFFQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNEC 404
           MR R F   DA+ F T ++   E 
Sbjct: 150 MRAREFLMKDAYSFHTTQESLQET 173


>gi|238784905|ref|ZP_04628905.1| Prolyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
 gi|238714222|gb|EEQ06234.1| Prolyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
          Length = 572

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 67/144 (46%), Gaps = 7/144 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E++ P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELL- 94

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +  D   +  R F L P +      +    + SY++LP+   +  + +R+E      G+
Sbjct: 95  -RFVD---RGERPFVLGPTHEEVITDLIRGEINSYKQLPLNFFQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNEC 404
           MR R F   DA+ F T ++   E 
Sbjct: 150 MRAREFLMKDAYSFHTTQESLQET 173


>gi|256851262|ref|ZP_05556651.1| prolyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260660686|ref|ZP_05861601.1| prolyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
 gi|282934730|ref|ZP_06339973.1| proline--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|297206129|ref|ZP_06923524.1| proline--tRNA ligase [Lactobacillus jensenii JV-V16]
 gi|256616324|gb|EEU21512.1| prolyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260548408|gb|EEX24383.1| prolyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
 gi|281301305|gb|EFA93606.1| proline--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|297149255|gb|EFH29553.1| proline--tRNA ligase [Lactobacillus jensenii JV-V16]
          Length = 565

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 73/150 (48%), Gaps = 16/150 (10%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHL-----WQQSGHW 311
           +I +  +GV  +   G+++ +       R I+++ + IN P+++  HL     WQ+SG +
Sbjct: 31  YIRQVTAGVYSYLPLGYRVLRK----AERIIEEEMDRINVPEMIMPHLLPATLWQESGRY 86

Query: 312 DSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRN 371
             Y   MF +K      +  R   L P +      +    LKSY+++P+ L +  + +R+
Sbjct: 87  YKYGDEMFKLKD-----RHGRDSLLGPTHEETFTEIIAKNLKSYKQMPLALYQIQTKFRD 141

Query: 372 EPSGSLHGLMRVRGFTQDDAHVF-CTKEQM 400
           E      GL+R R F   D + F  TKEQ+
Sbjct: 142 ENRPRF-GLLRGREFVMLDGYSFAATKEQL 170


>gi|167044004|gb|ABZ08690.1| putative anticodon binding domain protein [uncultured marine
           crenarchaeote HF4000_APKG3K8]
          Length = 479

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 90/393 (22%), Positives = 168/393 (42%), Gaps = 65/393 (16%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVL--DQHLWQQSGHWDSYRANMFAV 321
           G+I     G+ I++++   + +K+K+         VL  +  L ++  H++     +F V
Sbjct: 36  GLIVLRPDGYSIWESIKESLDKKLKETGHRNGFLPVLIPESLLAKEKEHFEGLNPEVFWV 95

Query: 322 -KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +  +  I D    AL+P +     ++F+  +KS+R+LP+++  + S  R E  G+    
Sbjct: 96  TQSGNSEIGD--RLALRPTSETLAYSLFSKWIKSWRDLPLKMNFWNSALRAEIKGT-KPF 152

Query: 381 MRVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDA 439
           +R   F   + H V  TK++   E       I+ +YK    E++ V + T          
Sbjct: 153 LRTSEFLWQEGHTVHATKDEAEKEVAD----ILELYKKTIEEELAVPVITG--------- 199

Query: 440 LWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-V 498
                           K S +D+         GA Y    E ++ D  G+  Q GT   +
Sbjct: 200 ----------------KKSEKDKF-------VGAVYTDTLESLMPD--GKALQMGTSHFL 234

Query: 499 DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQ 554
             N    F+  Y++ ++ +       +  +G   R IG MI     +    LP  ++PIQ
Sbjct: 235 GQNFSKPFDVKYLDENNVEA---FAWQTSWGVSWRLIGGMIMTHGDDKGLVLPPKVAPIQ 291

Query: 555 AIVTTITSS------AVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIII 607
            ++  I  S       ++ A +I + L ++ + +  D R   T  +K  +  +K IPI I
Sbjct: 292 VVIIPIYYSNDEKENVLQTACQIKDSLSNNDIRVHLDDREHLTPGFKFNDWEMKGIPIRI 351

Query: 608 ICGDKE-ASERSIGIRRFGSTTTQKVSL-LDAI 638
             G K+ A  + + +RR   T   K+S+ +DA+
Sbjct: 352 EIGPKDIAKNQVVLVRRHNQT---KISIGIDAL 381


>gi|288958966|ref|YP_003449307.1| prolyl-tRNA synthetase [Azospirillum sp. B510]
 gi|288911274|dbj|BAI72763.1| prolyl-tRNA synthetase [Azospirillum sp. B510]
          Length = 437

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 92/437 (21%), Positives = 171/437 (39%), Gaps = 53/437 (12%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E++   HR + R      I +  +G+  W   G+++ + +   +R  +     +E+  P 
Sbjct: 17  EAQIVSHRLMLRAG---MIRQTSAGIYAWLPLGYRVLRKIEQIVREEQDAAGAQELLMPT 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW++SG +D Y   M  +    D     R     P N      +F   +KSYR+L
Sbjct: 74  IQSADLWRESGRYDDYGKEMLRITDRHD-----REMLFGPTNEEMITDIFRSFVKSYRQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKD 417
           P+ L      +R+E      G+MR R F   DA+ F            K+    +  +  
Sbjct: 129 PLNLYHIQWKFRDEIRPRF-GVMRGREFLMKDAYSFDIDPAGARRSYQKMFLAYLRTFAR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWD---DAENIMKGV--------LDTIKNSSQ------ 460
            G + I ++  T P   +G D   +    AE    GV        LD +K++        
Sbjct: 188 IGLKAIPMRADTGP---IGGDLSHEFIILAETGESGVFCHKDWMTLDVLKDAPGMEDDLQ 244

Query: 461 ---DRINTGVLLGEGAFYGPKFEYILKDAI--GRDWQCGTIQVDFNLPSRF----NAFYV 511
              DR+ TG+       + P    +    +   R  + G I   FN  +++    NA   
Sbjct: 245 PFFDRV-TGIYAATDEKHDPANSPVPDADLVSARGIEVGHI---FNFGTKYSKPMNAVVA 300

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNLPLW---LSPIQAIVTTITSSAVEY 567
             + E   PV +     G + R +G +IE +   N  +W   ++P    +  + S   E 
Sbjct: 301 GPNGESI-PVEMGSYGIG-VSRLMGAIIEASHDDNGIIWPDAVAPFNVGLINLKSGDAET 358

Query: 568 AQEIANL---LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRF 624
            +  A L   L++  L +  D R+E    K  +  +  +P  ++ G +      + ++R 
Sbjct: 359 DRVCAELYAKLEAAGLEVAYDDRDERPGAKFADMDLIGVPWQLVVGPRGLKSGVVELKRR 418

Query: 625 GSTTTQKVSLLDAIPIL 641
            +   +++ +  A+  L
Sbjct: 419 ATGEKEELPVEAALAKL 435


>gi|195978861|ref|YP_002124105.1| prolyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
 gi|195975566|gb|ACG63092.1| prolyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
          Length = 613

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 53/102 (51%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  +++ +K      +D   F L P +      +    +
Sbjct: 63  EMLAPALLTADLWRESGRYETYGEDLYKLKN-----RDKSDFILGPTHEETFTTLVRDAV 117

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +  S YR+E     +GL+R R F   D + F
Sbjct: 118 KSYKQLPLNLYQIQSKYRDEKR-PRNGLLRTREFIMKDGYSF 158


>gi|309389074|gb|ADO76954.1| AAA ATPase [Halanaerobium praevalens DSM 2228]
          Length = 549

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/170 (23%), Positives = 89/170 (52%), Gaps = 2/170 (1%)

Query: 37  KAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVA 95
           + +AV I+ KVC+L++ + ++  ++ I         + R S   ++A+AV  ++PEV + 
Sbjct: 32  EVMAVFIDNKVCNLNEKITKKAKLKPIRINSELGNRIYRSSLYLVLAKAVYELFPEVILK 91

Query: 96  IGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKE 155
           I   I +G Y + + +   +  E+ +++ +M+EII  D    K  L  E+  ++ + +  
Sbjct: 92  IEISISNGVYCELENKDSLTKSEIFKLKDRMKEIINSDYKIKKHKLKKEEVLKIIQDENC 151

Query: 156 AYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAG 205
           +++ E+++    + + TLY    ++D      V ST  +K+F   +++ G
Sbjct: 152 SFRSELIKK-QDQAHYTLYEIDGYYDYFYYNMVPSTSYLKEFDLHLRIPG 200


>gi|289705162|ref|ZP_06501565.1| proline--tRNA ligase [Micrococcus luteus SK58]
 gi|289558106|gb|EFD51394.1| proline--tRNA ligase [Micrococcus luteus SK58]
          Length = 608

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/196 (23%), Positives = 85/196 (43%), Gaps = 19/196 (9%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E   HR L R     +I     G+  W   G K+   +   +R ++     +E++ P 
Sbjct: 19  EAEVASHRLLVRA---GYIRRAAPGIYSWLPLGLKVLAQVERIVREEMDAIGAQEVHFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L +  ++ +G WD Y   +F  +  D    D        +  P H  +F   +K    S
Sbjct: 76  LLPREPYEATGRWDEYGDGLF--RLQDRRGNDY-------LLAPTHEEMFTLLVKDLYSS 126

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI-IS 413
           Y++LP  L +  + YR+E +    GL+R R F   D++ F   +   +   + H    + 
Sbjct: 127 YKDLPAYLYQIQTKYRDE-ARPRAGLLRGREFIMKDSYSFTVDDAGLDAAYEAHRAAYLR 185

Query: 414 IYKDFGFEKIMVKLST 429
           I+   G E + V+ ++
Sbjct: 186 IFDRLGLEVVPVRATS 201


>gi|71279026|ref|YP_269920.1| prolyl-tRNA synthetase [Colwellia psychrerythraea 34H]
 gi|114152184|sp|Q47Z50|SYP_COLP3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|71144766|gb|AAZ25239.1| prolyl-tRNA synthetase [Colwellia psychrerythraea 34H]
          Length = 569

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 82/172 (47%), Gaps = 15/172 (8%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + +   +R ++ +    EI  P V    LWQ+SG  D Y   +  
Sbjct: 36  ASGLYTWLPTGLRVLKKVEQIVREEMQRAGGNEILMPMVQPADLWQESGRLDDYGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +   +D  K  R F L P +      +  + L SY++LP+ + +  S +R+E      G+
Sbjct: 96  I---NDRHK--RPFVLGPTHEEVVTKLVANELSSYKQLPLNVFQIQSKFRDEIRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFEKIMVKLSTRP 431
           MR R F   DA+ F     + +ECL K + ++   Y    FE++  +L+ RP
Sbjct: 150 MRGREFLMKDAYSF----HLEDECLEKTYQIMFDAYCRI-FERL--ELNFRP 194


>gi|255693100|ref|ZP_05416775.1| phosphoribulokinase family protein [Bacteroides finegoldii DSM
           17565]
 gi|260621142|gb|EEX44013.1| phosphoribulokinase family protein [Bacteroides finegoldii DSM
           17565]
          Length = 557

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/184 (22%), Positives = 84/184 (45%), Gaps = 2/184 (1%)

Query: 15  KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVI 73
           K FP+ ++  D+    + +   + V+  +N +   L+  V     IE +   D   +   
Sbjct: 16  KEFPIGSSLLDIYYGFNLNFPYQVVSAKVNNRSEGLNFRVYNNKDIEFLDVRDQSGMRTY 75

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
             S   ++ +AV  ++PE ++ +   +  G++ +    +P   +++ +I+++MQEIIA D
Sbjct: 76  VRSLCFVLFKAVTELFPEGKLFVEHPVSKGYFCNLRIGRPVELEDVMRIKQRMQEIIAED 135

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQ 193
             + +      +A  +F  +    KV +LE+         Y  G+  D   G  + STG 
Sbjct: 136 ISYHRIECHTTEAVRIFSERGMNDKVRLLET-SGSLYTYYYTLGDTVDYYYGNLLPSTGY 194

Query: 194 VKKF 197
           +K F
Sbjct: 195 LKLF 198


>gi|50365293|ref|YP_053718.1| prolyl-tRNA synthetase [Mesoplasma florum L1]
 gi|81827288|sp|Q6F0Y9|SYP_MESFL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|50363849|gb|AAT75834.1| prolyl-tRNA synthetase [Mesoplasma florum L1]
          Length = 473

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 80/376 (21%), Positives = 154/376 (40%), Gaps = 67/376 (17%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAV 321
           G I +   G+ I++ +  Y+  K K+ + + +  P ++ Q L+Q +  H + +   +  V
Sbjct: 35  GTIIFRPYGYAIWELIQKYLDAKFKELEVQNVYFPLLIPQSLFQKEKDHIEGFSPEIATV 94

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
               DT      F ++P +       F + +KSYR+LP+   ++ +V R E   +    +
Sbjct: 95  TRVGDTPLPEPLF-IRPTSEVLMANFFKNEVKSYRDLPLIFNQWTNVMRWE--KTTRPFL 151

Query: 382 RVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKL----STRPEKRVG 436
           R   F   + H V   +++  +  LKI    +  Y +F    +++ +     T  EK  G
Sbjct: 152 RTSEFLWQEGHTVHSERKEASDLTLKI----LDTYTEFAQNALLLPVIPGKKTEKEKFAG 207

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
           +D+ +            TI++   D                          G+  QCGT 
Sbjct: 208 ADSTY------------TIESLMHD--------------------------GQALQCGTS 229

Query: 497 QV---DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLW 549
                +F+ P  +   + N   +  H    +   +G   R IG +I     +    LP  
Sbjct: 230 HYFADNFSKP--YEIKFQNKEGKLEHA---YSTSWGVSTRLIGAIIMTHSDDNGLVLPSM 284

Query: 550 LSPIQAIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIII 607
           +SP+Q  +  I  T   ++  ++I   LK+ +  ++ D  +++  +KI E  IK IP+ I
Sbjct: 285 VSPVQVRLIQIKETDEVIKVTEDIKEALKNKY-RVDIDKTDKSFGFKISEAEIKGIPLRI 343

Query: 608 ICGDKEASERSIGIRR 623
             G ++     + I R
Sbjct: 344 EIGPRDLENNQVTISR 359


>gi|229918663|ref|YP_002887309.1| prolyl-tRNA synthetase [Exiguobacterium sp. AT1b]
 gi|229470092|gb|ACQ71864.1| prolyl-tRNA synthetase [Exiguobacterium sp. AT1b]
          Length = 569

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/166 (24%), Positives = 77/166 (46%), Gaps = 8/166 (4%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I ++ +G+  +   G K+   + + +R ++ +   +E+  P +    LW+++G W  Y  
Sbjct: 35  IRQNAAGIYSYLPLGHKVLHNIQTIIREEMNRAGAQELLMPAIQPAELWEETGRWGIYGP 94

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            +  +    D     R FAL   +     ++    L SY++LP+ L +  + YR+E    
Sbjct: 95  ELMRLTDRHD-----RRFALGATHEELITSIVRDELNSYKKLPMNLYQIQTKYRDERRPR 149

Query: 377 LHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFE 421
             GL+R R F   DA+ F  T+E +  E   ++N    I+   G +
Sbjct: 150 F-GLLRGREFLMKDAYSFHATQEDLDEEYTNMYNAYSRIFDRTGLK 194


>gi|254491952|ref|ZP_05105130.1| prolyl-tRNA synthetase [Methylophaga thiooxidans DMS010]
 gi|224462767|gb|EEF79038.1| prolyl-tRNA synthetase [Methylophaga thiooxydans DMS010]
          Length = 569

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/163 (25%), Positives = 74/163 (45%), Gaps = 12/163 (7%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G K+ +   + +R ++ K   +E+  P V    LWQ+S  W+ Y   +  
Sbjct: 36  ASGLYTWLPMGLKVLRKTEAIIRDEMDKAGAQEVLMPSVQPSELWQESQRWEKYGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +     T +  R F   P +      +    ++SY++LP+   +  + +R+E      GL
Sbjct: 96  I-----TDRHQREFCYGPTHEEVITDLVRQEIRSYKQLPINFYQIQTKFRDEIRPRF-GL 149

Query: 381 MRVRGFTQDDAHVF----CTKEQMFNECLKIHNLIIS-IYKDF 418
           MR R F   DA+ F     + +Q +++    ++ I S I  DF
Sbjct: 150 MRAREFLMKDAYSFHLDHASLQQTYDDMFAAYSRIFSRIGLDF 192


>gi|161621298|ref|YP_585241.2| prolyl-tRNA synthetase [Cupriavidus metallidurans CH34]
 gi|114152237|sp|Q1LIQ4|SYP_RALME RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
          Length = 573

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/162 (22%), Positives = 78/162 (48%), Gaps = 8/162 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           G+G+  +   G ++ + + + +R ++ +    E++ P +    LWQ++G WD     +  
Sbjct: 36  GAGIYNYMPVGLRVIRKVENIVREEMNRAGAVELSMPVIQPAELWQETGRWDKMGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +K      +  R FA++P +      +    ++SY++LPV   +  + +R+E      G+
Sbjct: 96  LKD-----RHERDFAVQPTSEEVVTDIARTEIRSYKQLPVNFYQIQTKFRDERRPRF-GI 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDFGFE 421
           MR R FT  DA+ F           + +++  + I++ FG E
Sbjct: 150 MRGREFTMKDAYSFDRDIDGLKASYQNMYDAYVRIFQRFGLE 191


>gi|134294675|ref|YP_001118410.1| prolyl-tRNA synthetase [Burkholderia vietnamiensis G4]
 gi|166980110|sp|A4JBC2|SYP_BURVG RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|134137832|gb|ABO53575.1| prolyl-tRNA synthetase [Burkholderia vietnamiensis G4]
          Length = 578

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 58/130 (44%), Gaps = 7/130 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P V    LWQ+SG W+ Y   +   K   D       F + P +      +  + +
Sbjct: 68  ELLMPAVQPAELWQESGRWEQYGPELLRFKDRKDN-----DFVIGPTHEEVITDIARNQI 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLI 411
           KSYR++PV   +  + +R+E      G+MR R F   DA+ F       NE   K+++  
Sbjct: 123 KSYRQMPVNFYQIQTKFRDEIRPRF-GVMRGREFLMKDAYSFDKDAAGLNESYRKMYDAY 181

Query: 412 ISIYKDFGFE 421
           + I+   G E
Sbjct: 182 VRIFTRLGLE 191


>gi|238792729|ref|ZP_04636360.1| Prolyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
 gi|238727837|gb|EEQ19360.1| Prolyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
          Length = 572

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 67/144 (46%), Gaps = 7/144 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E++ P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELL- 94

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +  D   +  R F L P +      +    + SY++LP+   +  + +R+E      G+
Sbjct: 95  -RFVD---RGERPFVLGPTHEEVITDLIRGEINSYKQLPLNFFQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNEC 404
           MR R F   DA+ F T ++   E 
Sbjct: 150 MRAREFLMKDAYSFHTTQESLQET 173


>gi|291286279|ref|YP_003503095.1| prolyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
 gi|290883439|gb|ADD67139.1| prolyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
          Length = 570

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 71/156 (45%), Gaps = 10/156 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ +AR   +  +A   SG+  +   G  + + +   +R+ + + D  E+  P 
Sbjct: 17  DAEVVSHKLMARAGMIKKVA---SGIYSYLPLGLVVIKKVEDIVRKCMNEADAVELMMPS 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    LWQ+SG WD Y   +  +K   +     R F   P +      +    + SY+ L
Sbjct: 74  VQPAELWQESGRWDFYGKELLRIKDRHN-----REFCYGPTHEEVTTDIIRSYINSYKAL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           PV L +  + +R+E      GLMR R F   DA+ F
Sbjct: 129 PVNLYQIQTKFRDEVRPRF-GLMRGREFIMKDAYSF 163


>gi|239917224|ref|YP_002956782.1| prolyl-tRNA synthetase, family II [Micrococcus luteus NCTC 2665]
 gi|281414302|ref|ZP_06246044.1| prolyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
 gi|259511606|sp|C5C9S6|SYP_MICLC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|239838431|gb|ACS30228.1| prolyl-tRNA synthetase, family II [Micrococcus luteus NCTC 2665]
          Length = 608

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/196 (23%), Positives = 85/196 (43%), Gaps = 19/196 (9%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E   HR L R     +I     G+  W   G K+   +   +R ++     +E++ P 
Sbjct: 19  EAEVASHRLLVRAG---YIRRAAPGIYSWLPLGLKVLAKVERIVREEMDAIGAQEVHFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L +  ++ +G WD Y   +F  +  D    D        +  P H  +F   +K    S
Sbjct: 76  LLPREPYEATGRWDEYGDGLF--RLQDRRGNDY-------LLAPTHEEMFTLLVKDLYSS 126

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI-IS 413
           Y++LP  L +  + YR+E +    GL+R R F   D++ F   +   +   + H    + 
Sbjct: 127 YKDLPAYLYQIQTKYRDE-ARPRAGLLRGREFIMKDSYSFTVDDAGLDAAYEAHRAAYLR 185

Query: 414 IYKDFGFEKIMVKLST 429
           I+   G E + V+ ++
Sbjct: 186 IFDRLGLEVVPVRATS 201


>gi|254294083|ref|YP_003060106.1| prolyl-tRNA synthetase [Hirschia baltica ATCC 49814]
 gi|254042614|gb|ACT59409.1| prolyl-tRNA synthetase [Hirschia baltica ATCC 49814]
          Length = 441

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/183 (23%), Positives = 80/183 (43%), Gaps = 11/183 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           + + GSG+  W   G ++ + + + +R  + +    E+  P +    LW++SG +D+Y  
Sbjct: 32  VKQTGSGIYTWLPLGLRVLKKIENIVREEQNRAGAIELLMPTIQPADLWKESGRYDAYGK 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  +    D     R     P N      +F   +KSY++LP+ L      +R+E    
Sbjct: 92  EMLRITDRHD-----REMLFGPTNEEVITDIFRSYVKSYKQLPLNLYHIQWKFRDEIRPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTKE-QMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
             G+MR R F   DA+ F   E +      K+    ++ +   G + + ++  T P   +
Sbjct: 147 F-GVMRGREFLMKDAYSFDVNEVEARKSYYKMFCAYLNTFSRMGLKAVPMRADTGP---I 202

Query: 436 GSD 438
           G D
Sbjct: 203 GGD 205


>gi|238754780|ref|ZP_04616131.1| Prolyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
 gi|238706940|gb|EEP99306.1| Prolyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
          Length = 572

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 67/144 (46%), Gaps = 7/144 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E++ P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYTWLPTGIRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELL- 94

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +  D   +  R F L P +      +    + SY++LP+   +  + +R+E      G+
Sbjct: 95  -RFVD---RGERPFVLGPTHEEVITDLVRGEINSYKQLPLNFFQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNEC 404
           MR R F   DA+ F T ++   E 
Sbjct: 150 MRAREFLMKDAYSFHTTQESLQET 173


>gi|194364305|ref|YP_002026915.1| prolyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3]
 gi|226701341|sp|B4SJ64|SYP_STRM5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|194347109|gb|ACF50232.1| prolyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3]
          Length = 567

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/206 (23%), Positives = 87/206 (42%), Gaps = 22/206 (10%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E   HR + R   +  +A   SG+  W   G ++ + +   +R ++ +    E   P 
Sbjct: 17  DAELTSHRLMLRAGMIRKLA---SGLYTWSPLGLRVLRKVERIVREEMDRAGAVEFQIPT 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +  + LW+Q+G W  +   +  +K   D     +TF   P             L SY++L
Sbjct: 74  IQPKELWEQTGRWQKFGPQLLKIKDRKD-----QTFCYSPTAEEAACDFARSELSSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-----KIHNLIIS 413
           PV   +  + +R+E      G+MR R F   DA+ F     + +ECL      + +    
Sbjct: 129 PVNFYQIQTKFRDEIRPRF-GVMRSREFLMKDAYSF----HLHDECLVREYENMKSAYSR 183

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDA 439
           I+   G +  MV+  +     +G DA
Sbjct: 184 IFTRLGLDFRMVQADSGA---IGGDA 206


>gi|284992392|ref|YP_003410946.1| prolyl-tRNA synthetase [Geodermatophilus obscurus DSM 43160]
 gi|284065637|gb|ADB76575.1| prolyl-tRNA synthetase [Geodermatophilus obscurus DSM 43160]
          Length = 582

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/188 (22%), Positives = 85/188 (45%), Gaps = 11/188 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E   HR L R     +I     G   W   G+++F+ +   +R ++ +   +E++ P 
Sbjct: 19  DAEVPSHRLLVRAG---YIRRAAPGGFTWLPLGYRVFRNVERVVREEMDRMGAQEVHFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++ +  W  Y  N+F  +  D    D   F L P +      +      SY++L
Sbjct: 76  LLPREPYEATNRWTEYGPNLF--RLQDRRGAD---FLLGPTHEEMFTLLVKDLYSSYKDL 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH-NLIISIYKD 417
           P+ L +  + YR+E +    GL R R FT  D++ F   +   ++    H +  I ++  
Sbjct: 131 PLSLYQIQTKYRDE-ARPRAGLFRGREFTMKDSYSFDVDDAGLDKSYAAHRDAYIRVFDR 189

Query: 418 FGFEKIMV 425
            G + ++V
Sbjct: 190 LGLDYVIV 197


>gi|222099131|ref|YP_002533699.1| Prolyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
 gi|254782923|sp|B9KBD7|SYP_THENN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|221571521|gb|ACM22333.1| Prolyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
          Length = 577

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 67/139 (48%), Gaps = 7/139 (5%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           +EI  P +    LW++SG WD Y   M  +K   +     R F L P +      +  + 
Sbjct: 67  QEILMPILQPAELWKRSGRWDDYGPEMMKLKDRHE-----RDFTLGPTHEEIVTDLVKNE 121

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI 411
           L+SYR+LP+ + +  + YR+E      GL+R R F   DA+ F +  +  +E  ++    
Sbjct: 122 LRSYRQLPLVVYQVANKYRDEIRPRF-GLLRAREFIMKDAYSFHSSWESLDETYELFKEA 180

Query: 412 IS-IYKDFGFEKIMVKLST 429
            S I +  G + ++++  T
Sbjct: 181 YSRIMERLGVKYMVIEAET 199


>gi|238763953|ref|ZP_04624909.1| Prolyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
 gi|238697770|gb|EEP90531.1| Prolyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
          Length = 572

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 67/144 (46%), Gaps = 7/144 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E++ P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELL- 94

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +  D   +  R F L P +      +    + SY++LP+   +  + +R+E      G+
Sbjct: 95  -RFVD---RGERPFVLGPTHEEVITDLIRGEINSYKQLPLNFFQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNEC 404
           MR R F   DA+ F T ++   E 
Sbjct: 150 MRAREFLMKDAYSFHTTQESLQET 173


>gi|260881838|ref|ZP_05893576.1| proline--tRNA ligase [Mitsuokella multacida DSM 20544]
 gi|260847809|gb|EEX67816.1| proline--tRNA ligase [Mitsuokella multacida DSM 20544]
          Length = 571

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 60/131 (45%), Gaps = 7/131 (5%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           +EI  P +     WQ+SG W +Y   M  +K      +  R F L P +     A+    
Sbjct: 67  QEIMMPILQPAEFWQESGRWGAYGDEMMRIK-----DRHGRDFCLGPTHEEMITALVRDE 121

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNL 410
           ++SY+ELP+ L +    +R+E      GLMR R F   D + F    +  NE   K+++ 
Sbjct: 122 VRSYKELPLMLYQIQDKFRDERRPRF-GLMRSREFIMKDLYSFDKDVEGMNESYKKMYDA 180

Query: 411 IISIYKDFGFE 421
             +I+   G E
Sbjct: 181 YTNIFTRMGLE 191


>gi|198283898|ref|YP_002220219.1| prolyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218666412|ref|YP_002426532.1| prolyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 23270]
 gi|226731419|sp|B7J4Y9|SYP_ACIF2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226731420|sp|B5EKH7|SYP_ACIF5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|198248419|gb|ACH84012.1| prolyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218518625|gb|ACK79211.1| prolyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 23270]
          Length = 570

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 72/156 (46%), Gaps = 10/156 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+E   H+ L R   +  +A   SG+  W   G ++ + +   +R ++ +   +E+  P 
Sbjct: 17  EAELVSHQLLLRGGFIRRLA---SGLYTWMPLGLRVLRKVERVVREEMDRSGAQELLMPV 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    LWQ+SG W+ Y   +  ++   D     R F L P +      +    + SYR+L
Sbjct: 74  VQPAELWQESGRWEQYGPELLRLRDRHD-----REFCLGPTHEEVISDLARREIHSYRQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           PV   +  + +R+E      GLMR R F   DA+ F
Sbjct: 129 PVNFYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSF 163


>gi|146310396|ref|YP_001175470.1| prolyl-tRNA synthetase [Enterobacter sp. 638]
 gi|166980121|sp|A4W6T9|SYP_ENT38 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|145317272|gb|ABP59419.1| prolyl-tRNA synthetase [Enterobacter sp. 638]
          Length = 572

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/170 (23%), Positives = 78/170 (45%), Gaps = 8/170 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E++ P V    LW +SG W+ Y   +  
Sbjct: 36  ASGLYTWLPTGLRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWVESGRWEQYGPELL- 94

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +  D   +  R+F L P +      +  + L SY++LP+   +  + +R+E      G+
Sbjct: 95  -RFVD---RGERSFVLGPTHEEVITDLIRNELNSYKQLPLNFFQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFEKIMVKLST 429
           MR R F   D++ F T ++   E   K++     I+   G +   V+  T
Sbjct: 150 MRSREFLMKDSYSFHTSQESLQETYDKMYEAYSKIFSRMGLDFRAVQADT 199


>gi|88860213|ref|ZP_01134852.1| prolyl-tRNA synthetase [Pseudoalteromonas tunicata D2]
 gi|88818207|gb|EAR28023.1| prolyl-tRNA synthetase [Pseudoalteromonas tunicata D2]
          Length = 573

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 8/162 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ K    E+  P +    LW +SG W+ +   +  
Sbjct: 36  ASGLYTWLPSGLRVLRKVEAIVRDEMEKAGAIEMLMPVIQPADLWIESGRWEQFGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +K   +     R FAL P +           + SY++LP+ L +  +  R+E      G+
Sbjct: 96  IKDRHN-----REFALGPTHEEVITEFVRKEVSSYKQLPLNLFQIQTKVRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFE 421
           MR R FT  DA+ F  + E + N    +H    ++++  G E
Sbjct: 150 MRAREFTMKDAYSFHLSDECLANTYAIMHQAYCNVFERIGLE 191


>gi|93355883|gb|ABF09972.1| prolyl-tRNA synthetase [Cupriavidus metallidurans CH34]
          Length = 614

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/162 (22%), Positives = 78/162 (48%), Gaps = 8/162 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           G+G+  +   G ++ + + + +R ++ +    E++ P +    LWQ++G WD     +  
Sbjct: 77  GAGIYNYMPVGLRVIRKVENIVREEMNRAGAVELSMPVIQPAELWQETGRWDKMGPELLR 136

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +K      +  R FA++P +      +    ++SY++LPV   +  + +R+E      G+
Sbjct: 137 LK-----DRHERDFAVQPTSEEVVTDIARTEIRSYKQLPVNFYQIQTKFRDERRPRF-GI 190

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDFGFE 421
           MR R FT  DA+ F           + +++  + I++ FG E
Sbjct: 191 MRGREFTMKDAYSFDRDIDGLKASYQNMYDAYVRIFQRFGLE 232


>gi|139439769|ref|ZP_01773160.1| Hypothetical protein COLAER_02191 [Collinsella aerofaciens ATCC
           25986]
 gi|133774919|gb|EBA38739.1| Hypothetical protein COLAER_02191 [Collinsella aerofaciens ATCC
           25986]
          Length = 573

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 78/165 (47%), Gaps = 10/165 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E   HR L R      I ++ +G+  +    W+  + + + +R ++     +E+  P 
Sbjct: 21  DAELASHRLLLR---AGMIRKEAAGLYSYLPLAWRSIRKIENIVRDEMDAAGAQELMMPI 77

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D  LW++SG  D+Y   +      DD  +  R F L P +     A+  + L+SY++L
Sbjct: 78  MVDAELWRESGRIDAYGKELVRF---DD--RHGREFVLGPTHEETVTALVRNELRSYKQL 132

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE 403
           PV L      +R+E      GLMR R F   DA+ F   ++   E
Sbjct: 133 PVNLYHIQDKFRDEFRPRF-GLMRGREFIMKDAYSFSATQESLQE 176


>gi|320120274|gb|EFE27922.2| proline--tRNA ligase [Filifactor alocis ATCC 35896]
          Length = 596

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 63/121 (52%), Gaps = 11/121 (9%)

Query: 279 LISYMRRKIKDDYEEINTPQVL-----DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           +++ + R I+++ +  N+ +VL        LW++SG W+++   MF +   ++     R 
Sbjct: 72  VLAKIERVIREEMDAANSQEVLMSAIQPSELWKESGRWENFGPEMFRLYDRNE-----RE 126

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
           F L P +     ++    LKSY++LP+ L +  + YR+E      G++R R F   DA+ 
Sbjct: 127 FCLGPTHEEIFTSLVRDELKSYKQLPLSLYQIQTKYRDEKRPRF-GVIRAREFIMKDAYT 185

Query: 394 F 394
           F
Sbjct: 186 F 186


>gi|317129168|ref|YP_004095450.1| prolyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
 gi|315474116|gb|ADU30719.1| prolyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
          Length = 566

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/166 (24%), Positives = 79/166 (47%), Gaps = 8/166 (4%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  SGV      G K  + + + +R ++ +   +E+  P +    LW++SG W++Y  
Sbjct: 32  IRQSTSGVYSLLPLGLKALKKVEAIVREEMNRAGAQEMLMPAIQQSELWKESGRWEAYGP 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            +  +       +  R FAL P +      V    +K+Y++LP+ L +  + +R+E    
Sbjct: 92  ELMRLHD-----RHGREFALGPTHEEVITTVVRDDVKTYKKLPMTLYQIQTKFRDERRPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFE 421
             G++R R F   DA+ F T ++  +E   K++    +I+   G +
Sbjct: 147 F-GVLRSREFLMKDAYSFDTSQEGLDESYNKMYEAYTNIFTRCGLD 191


>gi|320535781|ref|ZP_08035862.1| prolyl-tRNA synthetase [Treponema phagedenis F0421]
 gi|320147329|gb|EFW38864.1| prolyl-tRNA synthetase [Treponema phagedenis F0421]
          Length = 576

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 7/143 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           G+G+  +   G + F  + + +R ++      E     V+   LWQ+SG WD+    +  
Sbjct: 36  GNGLFAYLPLGLRSFHKIENIIREELDAIGCLECKPSVVIPGELWQESGRWDAMGDELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +K  +   +DL    + P       A+    L SY++ P+ L +  + YR+E     +GL
Sbjct: 96  MK--NRLNQDL---VVSPTAEEAFTALLRFELSSYKQFPLTLYQINTKYRDEIRPR-YGL 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNE 403
           MR R FT  DA+ F T ++  +E
Sbjct: 150 MRAREFTMMDAYSFHTTQESLDE 172


>gi|319941771|ref|ZP_08016093.1| prolyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
 gi|319804704|gb|EFW01571.1| prolyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
          Length = 582

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 66/137 (48%), Gaps = 7/137 (5%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           +GV  +   G ++ + + + +R + ++    E+  P V    LWQ++G W+ Y   +  +
Sbjct: 37  AGVYTYMPLGLRVIRKIENIIRDEMVRAGSIELLMPMVQPAELWQETGRWEKYGPELLRI 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           K      + +R F L+P +      V    +KS+R+LPV      + +R+E      G+M
Sbjct: 97  KD-----RHMRDFVLQPTSEEVITDVARQEIKSWRQLPVNFFHIQTKFRDERRPRF-GVM 150

Query: 382 RVRGFTQDDAHVFCTKE 398
           R R FT  DA+ F   E
Sbjct: 151 RGREFTMKDAYSFDRDE 167


>gi|317402479|gb|EFV83047.1| ProS protein [Achromobacter xylosoxidans C54]
          Length = 576

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 81/184 (44%), Gaps = 11/184 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQ 298
           E+E   H+ + R   +  +A    G+  +   G KI + + + +R ++      E+  P 
Sbjct: 17  EAEVASHQLMTRAGMIRKLA---GGIYTYMPLGLKIIRKVEAIVREEMNASGAIELLMPV 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    LW +SG W+ Y A +  +K      +  R F L+P +      +  + + SYR+L
Sbjct: 74  VQPAELWMESGRWEQYGAELLRIKD-----RHQRDFVLQPTSEEVITDIARNEIHSYRQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKD 417
           P+      + +R+E      GLMR R FT  DA+ F   E    +    ++   + I+  
Sbjct: 129 PLNFYHIQTKFRDERRPRF-GLMRGREFTMKDAYSFDRDEAGAQKSYDNMYAAYMRIFGR 187

Query: 418 FGFE 421
            G E
Sbjct: 188 LGLE 191


>gi|269795644|ref|YP_003315099.1| prolyl-tRNA synthetase, family II [Sanguibacter keddieii DSM 10542]
 gi|269097829|gb|ACZ22265.1| prolyl-tRNA synthetase, family II [Sanguibacter keddieii DSM 10542]
          Length = 591

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/192 (22%), Positives = 83/192 (43%), Gaps = 11/192 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   HR L R     +I     G+  W   G ++   + + +R +++    +E++ P 
Sbjct: 19  DAEVASHRLLVRAG---YIRRAAPGIYTWLPLGLRVLAKVEAVVREEMQAAGAQEVHFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++ +G W  Y  N+F +K   D       + L P +      +      SY++L
Sbjct: 76  LLPREPYEATGRWTEYGPNLFRLKDRRDN-----DYLLAPTHEEMFTLLVKDLYSSYKDL 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS-IYKD 417
           PV L +  + YR+E +    GL+R R F   DA+ F   +        +       I+  
Sbjct: 131 PVTLFQVQTKYRDE-ARPRAGLIRGREFVMKDAYSFDVDDAGLEASYLVQRAAYEKIFTR 189

Query: 418 FGFEKIMVKLST 429
            G E ++V  ++
Sbjct: 190 LGLEYVVVAATS 201


>gi|167045283|gb|ABZ09941.1| putative anticodon binding domain protein [uncultured marine
           crenarchaeote HF4000_APKG9P22]
          Length = 479

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 87/383 (22%), Positives = 165/383 (43%), Gaps = 61/383 (15%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVL--DQHLWQQSGHWDSYRANMFAV 321
           G+I     G+ I++++   + +K+K+         VL  +  L ++  H++     +F V
Sbjct: 36  GLIVLRPDGYSIWESIKESLDKKLKETGHRNGFLPVLIPESLLAKEKEHFEGLNPEVFWV 95

Query: 322 -KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +  +  I D    AL+P +     ++F+  ++S+R+LP+++  + S  R E  G+    
Sbjct: 96  TQSGNSEIGD--RLALRPTSETLAYSLFSKWIRSWRDLPLKMNFWNSALRAEIKGT-KPF 152

Query: 381 MRVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDA 439
           +R   F   + H V  TK++   E       I+ +YK    E++ V + T          
Sbjct: 153 LRTSEFLWQEGHTVHATKDEAEKEVAD----ILELYKKTIEEELAVPVITG--------- 199

Query: 440 LWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-V 498
                           K S +D+         GA Y    E ++ D  G+  Q GT   +
Sbjct: 200 ----------------KKSEKDKF-------VGAVYTDTLESLMPD--GKALQMGTSHFL 234

Query: 499 DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI---ENFKG-NLPLWLSPIQ 554
             N    F+  Y++ ++ +       +  +G   R IG MI    + KG  LP  ++PIQ
Sbjct: 235 GQNFSKPFDVKYLDENNVE---TFAWQTSWGVSWRLIGGMIMIHGDDKGLVLPPKVAPIQ 291

Query: 555 AIVTTITSS------AVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIII 607
            ++  I  S       ++ A +I + L ++ + +  D R + T  +K  +  ++ IPI I
Sbjct: 292 VVIIPIYYSNDEKENVLQTACQIKDSLSNNDIRVHLDDREQLTPGFKFNDWEMRGIPIRI 351

Query: 608 ICGDKE-ASERSIGIRRFGSTTT 629
             G K+ A  +++ +RR   T T
Sbjct: 352 EIGPKDIAKNQAVLVRRHTQTKT 374


>gi|208779640|ref|ZP_03246985.1| prolyl-tRNA synthetase [Francisella novicida FTG]
 gi|208744601|gb|EDZ90900.1| prolyl-tRNA synthetase [Francisella novicida FTG]
          Length = 565

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 80/174 (45%), Gaps = 15/174 (8%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G K+ Q + + +R ++ K    E+  P +L   L Q++  WD +   +  
Sbjct: 36  ASGIYTWMPLGLKVLQKIQNIVRDEMNKAGASELLLPSILPSELLQETHRWDKFGPELLK 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +    +     R F   P +    V +    +KSY++LP+ L +  + +R+E      G+
Sbjct: 96  LNDRHN-----RDFCYGPTHEEPIVDMARDTIKSYKQLPLNLYQIQTKFRDEIRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDFGFEKIMVKLSTRPEK 433
           MR R F   DA+ F    Q    CL+  +N + + Y +   +KI   L+ RP K
Sbjct: 150 MRAREFIMKDAYSFHENSQ----CLRNTYNTMYATYCNI-LDKI--GLAYRPVK 196


>gi|307297853|ref|ZP_07577659.1| prolyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306917113|gb|EFN47495.1| prolyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 580

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/167 (25%), Positives = 75/167 (44%), Gaps = 8/167 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            +G+  +   G+++ + +   +R+++     +EI  P +    LW ++G WD Y   M  
Sbjct: 36  AAGIYSFLPLGFRVLKKIEDIVRQEMNAIGSQEILMPIIQPAELWHETGRWDDYGPEMMR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           ++   +     R F L P +      +  + L SY++LPV L +    YR+E      GL
Sbjct: 96  MQDRHE-----RFFTLGPTHEEIITHLLRNELNSYKQLPVSLYQIAMKYRDEIRPRF-GL 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDFGFEKIMVK 426
           MR R F   DA+ F       +E  K  +     I +  G E ++V+
Sbjct: 150 MRSREFLMKDAYSFHGSWSSLDETYKQFYGAYSKILQRIGLEFLVVE 196


>gi|294675236|ref|YP_003575852.1| phosphoribulokinase/uridine kinase family protein [Prevotella
           ruminicola 23]
 gi|294473660|gb|ADE83049.1| phosphoribulokinase/uridine kinase family protein [Prevotella
           ruminicola 23]
          Length = 561

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/188 (23%), Positives = 91/188 (48%), Gaps = 10/188 (5%)

Query: 15  KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-----EGSIEIITPEDPRS 69
           K+FP   + +DV ++ +  L  K   V+   KV + S  ++        +E +       
Sbjct: 13  KSFPEGTSLADVYQAFASELNFKYPVVS--AKVNNASQGLKFRLYQNRDVEFLDARSGSG 70

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE--QPFSSDELAQIEKKMQ 127
             V   S   ++ +A   ++P  ++ +   I +G+Y +F K+  +P + +++ +I ++M+
Sbjct: 71  RRVYTRSLCFVLYKATSDVFPGSKLYMEHPISNGYYCNFKKKNNEPLTDEDVQKICQRMK 130

Query: 128 EIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPH 187
           EI+  D PF +   + ++A  +F  +  A KV+++E+   +     Y  G+  D   GP 
Sbjct: 131 EIVDLDLPFRRTEATTDEAVRVFSERGFADKVKLIET-SGQIYTDYYMLGDTVDYYYGPL 189

Query: 188 VRSTGQVK 195
           V S G +K
Sbjct: 190 VPSAGFLK 197


>gi|237815257|ref|ZP_04594255.1| prolyl-tRNA synthetase [Brucella abortus str. 2308 A]
 gi|237790094|gb|EEP64304.1| prolyl-tRNA synthetase [Brucella abortus str. 2308 A]
          Length = 445

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/214 (23%), Positives = 91/214 (42%), Gaps = 25/214 (11%)

Query: 236 YFL-------EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KI 287
           YFL       +E+E   HR + R      I +  +G+  W   G K+   + + +R  + 
Sbjct: 9   YFLPILKENPKEAEIVSHRLMLRS---GMIRQQSAGIYSWLPIGLKVLNKVCTIIREEQN 65

Query: 288 KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
           +    EI  P +    LW++SG +D+Y   M  ++      +  R     P N      +
Sbjct: 66  RAGANEILMPTIQSADLWRESGRYDAYGKEMLRIQD-----RQKREMLFGPTNEEMVTDI 120

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
           F   ++SY++LP+ L      +R+E      G+MR R F   DA+ F    +     +  
Sbjct: 121 FRSYVRSYKDLPLNLYHIQWKFRDEVRPRF-GVMRSREFLMKDAYSFDLDYE--GAKMAY 177

Query: 408 HNLIISIYKDF---GFEKIMVKLSTRPEKRVGSD 438
           + + +S  + F   G + I ++  T P   +G D
Sbjct: 178 YRMFVSYLRTFARVGLQAIPMRADTGP---IGGD 208


>gi|225627317|ref|ZP_03785354.1| prolyl-tRNA synthetase [Brucella ceti str. Cudo]
 gi|225617322|gb|EEH14367.1| prolyl-tRNA synthetase [Brucella ceti str. Cudo]
          Length = 445

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/214 (23%), Positives = 91/214 (42%), Gaps = 25/214 (11%)

Query: 236 YFL-------EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KI 287
           YFL       +E+E   HR + R      I +  +G+  W   G K+   + + +R  + 
Sbjct: 9   YFLPILKENPKEAEIVSHRLMLRS---GMIRQQSAGIYSWLPIGLKVLNKVCTIIREEQN 65

Query: 288 KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
           +    EI  P +    LW++SG +D+Y   M  ++   +     R     P N      +
Sbjct: 66  RAGANEILMPTIQSADLWRESGRYDAYGKEMLRIQDRQE-----REMLFGPTNEEMVTDI 120

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
           F   ++SY++LP+ L      +R+E      G+MR R F   DA+ F    +     +  
Sbjct: 121 FRSYVRSYKDLPLNLYHIQWKFRDEVRPRF-GVMRSREFLMKDAYSFDLDYE--GAKMAY 177

Query: 408 HNLIISIYKDF---GFEKIMVKLSTRPEKRVGSD 438
           + + +S  + F   G + I ++  T P   +G D
Sbjct: 178 YRMFVSYLRTFARVGLQAIPMRADTGP---IGGD 208


>gi|17987423|ref|NP_540057.1| prolyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|17983114|gb|AAL52321.1| prolyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
          Length = 445

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/214 (23%), Positives = 91/214 (42%), Gaps = 25/214 (11%)

Query: 236 YFL-------EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KI 287
           YFL       +E+E   HR + R      I +  +G+  W   G K+   + + +R  + 
Sbjct: 9   YFLPILKENPKEAEIVSHRLMLRS---GMIRQQSAGIYSWLPIGLKVLNKVCTIIREEQN 65

Query: 288 KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
           +    EI  P +    LW++SG +D+Y   M  ++      +  R     P N      +
Sbjct: 66  RAGANEILMPTIQSADLWRESGRYDAYGKEMLRIQD-----RQKREMLFGPTNEEMVTDI 120

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
           F   ++SY++LP+ L      +R+E      G+MR R F   DA+ F    +     +  
Sbjct: 121 FRSYVRSYKDLPLNLYHIQWKFRDEVRPRF-GVMRSREFLMKDAYSFDLDYE--GAKMAY 177

Query: 408 HNLIISIYKDF---GFEKIMVKLSTRPEKRVGSD 438
           + + +S  + F   G + I ++  T P   +G D
Sbjct: 178 YRMFVSYLRTFARVGLQAIPMRADTGP---IGGD 208


>gi|62289771|ref|YP_221564.1| prolyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941]
 gi|82699699|ref|YP_414273.1| prolyl-tRNA synthetase [Brucella melitensis biovar Abortus 2308]
 gi|189024014|ref|YP_001934782.1| prolyl-tRNA synthetase [Brucella abortus S19]
 gi|254697210|ref|ZP_05159038.1| prolyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260545481|ref|ZP_05821222.1| prolyl-tRNA synthetase [Brucella abortus NCTC 8038]
 gi|260761620|ref|ZP_05873963.1| prolyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
 gi|81309431|sp|Q57DT1|SYP_BRUAB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|114152174|sp|Q2YNE3|SYP_BRUA2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226699122|sp|B2S561|SYP_BRUA1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|62195903|gb|AAX74203.1| ProS, prolyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941]
 gi|82615800|emb|CAJ10798.1| tRNA synthetases, class-II (G, H, P and S):Prolyl-tRNA synthetase,
           class IIa:Anticodon binding domain:Prolyl-tRNA
           synthetase [Brucella melitensis biovar Abortus 2308]
 gi|189019586|gb|ACD72308.1| prolyl-tRNA synthetase [Brucella abortus S19]
 gi|260096888|gb|EEW80763.1| prolyl-tRNA synthetase [Brucella abortus NCTC 8038]
 gi|260672052|gb|EEX58873.1| prolyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
          Length = 442

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/214 (23%), Positives = 91/214 (42%), Gaps = 25/214 (11%)

Query: 236 YFL-------EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KI 287
           YFL       +E+E   HR + R      I +  +G+  W   G K+   + + +R  + 
Sbjct: 6   YFLPILKENPKEAEIVSHRLMLRS---GMIRQQSAGIYSWLPIGLKVLNKVCTIIREEQN 62

Query: 288 KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
           +    EI  P +    LW++SG +D+Y   M  ++      +  R     P N      +
Sbjct: 63  RAGANEILMPTIQSADLWRESGRYDAYGKEMLRIQD-----RQKREMLFGPTNEEMVTDI 117

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
           F   ++SY++LP+ L      +R+E      G+MR R F   DA+ F    +     +  
Sbjct: 118 FRSYVRSYKDLPLNLYHIQWKFRDEVRPRF-GVMRSREFLMKDAYSFDLDYE--GAKMAY 174

Query: 408 HNLIISIYKDF---GFEKIMVKLSTRPEKRVGSD 438
           + + +S  + F   G + I ++  T P   +G D
Sbjct: 175 YRMFVSYLRTFARVGLQAIPMRADTGP---IGGD 205


>gi|225852336|ref|YP_002732569.1| prolyl-tRNA synthetase [Brucella melitensis ATCC 23457]
 gi|256044499|ref|ZP_05447403.1| prolyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|256113355|ref|ZP_05454213.1| prolyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|256264165|ref|ZP_05466697.1| prolyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9]
 gi|260563853|ref|ZP_05834339.1| prolyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|265990923|ref|ZP_06103480.1| prolyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|265994761|ref|ZP_06107318.1| prolyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|114152175|sp|Q8YGL8|SYP_BRUME RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|254782889|sp|C0RIF7|SYP_BRUMB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|225640701|gb|ACO00615.1| prolyl-tRNA synthetase [Brucella melitensis ATCC 23457]
 gi|260153869|gb|EEW88961.1| prolyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|262765874|gb|EEZ11663.1| prolyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|263001707|gb|EEZ14282.1| prolyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|263094383|gb|EEZ18228.1| prolyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9]
 gi|326408844|gb|ADZ65909.1| prolyl-tRNA synthetase [Brucella melitensis M28]
 gi|326538559|gb|ADZ86774.1| prolyl-tRNA synthetase [Brucella melitensis M5-90]
          Length = 442

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/214 (23%), Positives = 91/214 (42%), Gaps = 25/214 (11%)

Query: 236 YFL-------EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KI 287
           YFL       +E+E   HR + R      I +  +G+  W   G K+   + + +R  + 
Sbjct: 6   YFLPILKENPKEAEIVSHRLMLRS---GMIRQQSAGIYSWLPIGLKVLNKVCTIIREEQN 62

Query: 288 KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
           +    EI  P +    LW++SG +D+Y   M  ++      +  R     P N      +
Sbjct: 63  RAGANEILMPTIQSADLWRESGRYDAYGKEMLRIQD-----RQKREMLFGPTNEEMVTDI 117

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
           F   ++SY++LP+ L      +R+E      G+MR R F   DA+ F    +     +  
Sbjct: 118 FRSYVRSYKDLPLNLYHIQWKFRDEVRPRF-GVMRSREFLMKDAYSFDLDYE--GAKMAY 174

Query: 408 HNLIISIYKDF---GFEKIMVKLSTRPEKRVGSD 438
           + + +S  + F   G + I ++  T P   +G D
Sbjct: 175 YRMFVSYLRTFARVGLQAIPMRADTGP---IGGD 205


>gi|223984654|ref|ZP_03634777.1| hypothetical protein HOLDEFILI_02073 [Holdemania filiformis DSM
           12042]
 gi|223963395|gb|EEF67784.1| hypothetical protein HOLDEFILI_02073 [Holdemania filiformis DSM
           12042]
          Length = 566

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 74/138 (53%), Gaps = 7/138 (5%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  +GV  +   G+K+ + + + +R ++ +   +E+  P ++ + ++  SG  D++ +
Sbjct: 32  IKKSSAGVYMYLPLGYKVLKKIENIVREEMDQAGSQELLMPALIPEEVYVASGRRDNFGS 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
           +MF++K   D     +++ L P +           ++SY+++P  L +F + YR+E    
Sbjct: 92  SMFSLK---DRFN--KSYVLGPTHEELFAVAAGMKIRSYKDMPFNLYQFQTKYRDEAR-P 145

Query: 377 LHGLMRVRGFTQDDAHVF 394
            +GL+RVR F   DA+ F
Sbjct: 146 RYGLIRVREFIMKDAYSF 163


>gi|302411110|ref|XP_003003388.1| prolyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
 gi|261357293|gb|EEY19721.1| prolyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
          Length = 474

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 97/451 (21%), Positives = 176/451 (39%), Gaps = 86/451 (19%)

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           +R H KL R   L    +  SG+      G++I   L S + + ++      +    +  
Sbjct: 54  ERAHDKLIRAGLL---RQSHSGIFHLLPMGYRIQSKLESLIDKYMQSLGASRVALSSITS 110

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRT--FALKPMNCPGHVAVFNHGLKSYRELP 359
           + LWQQSG ++   + +F         +D R   + L P +     ++    +KSY+ELP
Sbjct: 111 KKLWQQSGRYEKLGSELF-------NFQDRRGADYMLAPTHEEEVTSLVAQSVKSYKELP 163

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDF 418
           +RL +    YR+E     HGL+R R FT  D + F            ++     S +   
Sbjct: 164 LRLYQTTRKYRDELR-PRHGLLRTREFTMKDLYTFDVDTSAAIQTYEQVQGAYASFFGSL 222

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAEN------------IMKGVLDTIKNSSQDRINTG 466
           G   +        + R GS  +  D  +            IMK       N+ +  +N+ 
Sbjct: 223 GLPVV--------KARAGSGDMGGDLSHEYHFTSPIGEDLIMKC------NNCEFAVNSD 268

Query: 467 VL------LGEGAFYGPKFE---YILKDA--IGRDWQCGT-----IQVDFNLPSR----- 505
           +           A + PK E     +K+A  +G  +  GT     +     LP+      
Sbjct: 269 IAEQPANDSAMDAQHCPKCEAGTLEVKEALEVGHTFHLGTRYSEPLGARIALPTTSQGDS 328

Query: 506 ----FNAFYVNSHSE-KCHPVMIHRAVFGSIERFIGIMIENFKGNL----PLWLSPIQAI 556
                +A   ++H +  CH +         + R IG + E+F   +    P  +SP +  
Sbjct: 329 QSADTSAARASTHIQMGCHGI--------GVSRLIGAVAEHFADPVGLQWPRAISPYEVE 380

Query: 557 VT---TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD-- 611
           +     + + AV+   ++ + L SH   +  D R  ++ +K+++  +   PI+++ G   
Sbjct: 381 IVFADGLEAQAVQIYDDVVHGL-SHTTDVLLDDRPVSLPWKLKDADLTGYPIVVVLGQVW 439

Query: 612 KEASERSIGIRRFG-STTTQKVSLLDAIPIL 641
           K+     +  RR G   T Q   +L  I  L
Sbjct: 440 KKTGNIELQCRRLGIKETVQPSDILQRISEL 470


>gi|320100286|ref|YP_004175878.1| prolyl-tRNA synthetase [Desulfurococcus mucosus DSM 2162]
 gi|319752638|gb|ADV64396.1| prolyl-tRNA synthetase [Desulfurococcus mucosus DSM 2162]
          Length = 480

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 76/317 (23%), Positives = 138/317 (43%), Gaps = 71/317 (22%)

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVR---GFTQDDAHVFCTKEQMFNE 403
           ++N  +K  ++LP+++ +  +V+R E +   H ++RVR   GF +  AH   T      E
Sbjct: 121 MWNMWIKGRKDLPLKMYQVVNVFRYE-TKMTHPILRVREIMGFIE--AH---TAHATMEE 174

Query: 404 CLKIHNLIISIYKDFGFEKIMVK---LSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQ 460
             K  +  I+IYK+F F ++ +    + T P         WD                  
Sbjct: 175 AEKQISEAIAIYKEF-FNRLQLPYFIVKTPP---------WDTFA--------------- 209

Query: 461 DRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF-NAF---YVNSHSE 516
                      GA Y   F  ++ D  G+  + G++    NL  +F  AF   Y+++   
Sbjct: 210 -----------GAEYNYDFITVMPD--GKGLELGSV---INLGQKFAKAFEIKYMDTDGV 253

Query: 517 KCHPVMIHRAVFGSIERFIGIMIENFKGN-----LPLWLSPIQAIVTTIT----SSAVEY 567
           + H   +++  +G  ER +G +I    G+      P  ++PIQ ++  +     +  +EY
Sbjct: 254 EKH---VYQTCYGVSERVLGAVI-GIHGDETGLFFPPDIAPIQVVIVPVMKPGENQVLEY 309

Query: 568 AQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS 626
           A +++N+LK+H + +  D   E T  +K     +K +P  I  G KE    ++ I R   
Sbjct: 310 AFKVSNILKAHGVRVFVDTDQEHTPGWKYYYWEMKGVPTRIEVGRKELDASTVTIARRDK 369

Query: 627 TTTQKVSLLDAIPILTK 643
                V L +A+ +L K
Sbjct: 370 REKHVVKLEEAVDLLRK 386


>gi|291280439|ref|YP_003497274.1| prolyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
 gi|290755141|dbj|BAI81518.1| prolyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
          Length = 573

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/192 (22%), Positives = 91/192 (47%), Gaps = 11/192 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQ 298
           E+E   H+ + R   +  +A   +G+  +   G K+ + + + +R+ + +    E+  P 
Sbjct: 17  EAEVVSHKFMLRAGMIRKVA---AGIYNYLPAGLKVIKKVENIVRKYMNEAGAIELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+   LW +SG W+ Y   +  +K   D     R F + P +      +  + +KSY++L
Sbjct: 74  VVPAELWIESGRWNVYGKELLRLKDRHD-----RDFCIGPTHEEVVTDIVRNEVKSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC-LKIHNLIISIYKD 417
           P+ L +  + +R+E      GLMR R F   DA+ F   ++   +  + ++     I++ 
Sbjct: 129 PLNLYQIQTKFRDEVRPRF-GLMRGREFIMKDAYSFDVDDEGAEKSYMLMYEAYCKIFEA 187

Query: 418 FGFEKIMVKLST 429
            G E ++V+  +
Sbjct: 188 CGLEYVVVEADS 199


>gi|28572736|ref|NP_789516.1| prolyl-tRNA synthetase [Tropheryma whipplei TW08/27]
 gi|81839165|sp|Q83HI1|SYP_TROW8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|28410869|emb|CAD67254.1| prolyl-tRNA synthetase [Tropheryma whipplei TW08/27]
          Length = 601

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 80/177 (45%), Gaps = 17/177 (9%)

Query: 230 ELTQYLY--FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKI---FQTLISYMR 284
           +++ +L+  F E+    + R     +   +I + GSG+  W   G K+    + +I Y  
Sbjct: 4   KVSDFLFRTFREDPATTESRGYGFLLRAGYIRQTGSGIFSWMPLGLKVRHKIENIIRYEM 63

Query: 285 RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT--FALKPMNCP 342
           R++  +  E+  P +    L++QSG W  Y  ++F        +KD R   + L P +  
Sbjct: 64  RQV--NAIEVLFPALFSADLFKQSGRWSEYGDDIF-------RLKDRRQGDYLLAPTHEE 114

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQ 399
               +      SYR+LP  + +    YR+E      GL+R R F+  DA+ F   E+
Sbjct: 115 AFTQMMKEICTSYRDLPRTVYQIQDKYRDELR-PRAGLLRSREFSMKDAYSFDLDEK 170


>gi|254689076|ref|ZP_05152330.1| prolyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
 gi|254693559|ref|ZP_05155387.1| prolyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
 gi|256257325|ref|ZP_05462861.1| prolyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|260754574|ref|ZP_05866922.1| prolyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
 gi|260883601|ref|ZP_05895215.1| prolyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|261213824|ref|ZP_05928105.1| prolyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
 gi|297248174|ref|ZP_06931892.1| prolyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196]
 gi|260674682|gb|EEX61503.1| prolyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
 gi|260873129|gb|EEX80198.1| prolyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|260915431|gb|EEX82292.1| prolyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
 gi|297175343|gb|EFH34690.1| prolyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196]
          Length = 442

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/214 (23%), Positives = 91/214 (42%), Gaps = 25/214 (11%)

Query: 236 YFL-------EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KI 287
           YFL       +E+E   HR + R      I +  +G+  W   G K+   + + +R  + 
Sbjct: 6   YFLPILKENPKEAEIVSHRLMLRS---GMIRQQSAGIYSWLPIGLKVLNKVCTIIREEQN 62

Query: 288 KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
           +    EI  P +    LW++SG +D+Y   M  ++      +  R     P N      +
Sbjct: 63  RAGANEILMPTIQSADLWRESGRYDAYGKEMLRIQD-----RQKREMLFGPTNEEMVTDI 117

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
           F   ++SY++LP+ L      +R+E      G+MR R F   DA+ F    +     +  
Sbjct: 118 FRSYVRSYKDLPLNLYHIQWKFRDEVRPRF-GVMRSREFLMKDAYSFDLDYE--GAKMAY 174

Query: 408 HNLIISIYKDF---GFEKIMVKLSTRPEKRVGSD 438
           + + +S  + F   G + I ++  T P   +G D
Sbjct: 175 YRMFVSYLRTFARVGLQAIPMRADTGP---IGGD 205


>gi|160915444|ref|ZP_02077655.1| hypothetical protein EUBDOL_01452 [Eubacterium dolichum DSM 3991]
 gi|158432564|gb|EDP10853.1| hypothetical protein EUBDOL_01452 [Eubacterium dolichum DSM 3991]
          Length = 539

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/177 (24%), Positives = 84/177 (47%), Gaps = 3/177 (1%)

Query: 23  GSDVAESISRSLAKKAV-AVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIRHSCAHI 80
           G  + E + +   K+ + AV INGK+ DL   V+EG S+  +  +      +   +   +
Sbjct: 16  GKSIYELVEKQADKEHIYAVIINGKLHDLRYCVQEGGSLRFVYAKSETGRLIYERTLLFL 75

Query: 81  MAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQY 140
           +  A      ++ +     + +G Y D      F+  ++ +IEKKM+ IIAR     ++ 
Sbjct: 76  LIAAAHEYRRDLHIIAQHSLSEGVYCDVRCTNTFTPLDVVEIEKKMKAIIARKESIYRKV 135

Query: 141 LSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
           +S ++A   FE+K   YK ++L    +K++ ++Y      D   G  +  T  +K+F
Sbjct: 136 VSTKEAAAYFEAKGMLYKADMLAQRKSKKS-SIYTLCGVDDYFYGIMLPDTSYLKEF 191


>gi|15965039|ref|NP_385392.1| prolyl-tRNA synthetase [Sinorhizobium meliloti 1021]
 gi|307301111|ref|ZP_07580880.1| prolyl-tRNA synthetase [Sinorhizobium meliloti BL225C]
 gi|307317844|ref|ZP_07597282.1| prolyl-tRNA synthetase [Sinorhizobium meliloti AK83]
 gi|81854328|sp|Q92QN2|SYP_RHIME RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|15074218|emb|CAC45865.1| Probable prolyl-tRNA synthetase [Sinorhizobium meliloti 1021]
 gi|306896606|gb|EFN27354.1| prolyl-tRNA synthetase [Sinorhizobium meliloti AK83]
 gi|306904066|gb|EFN34652.1| prolyl-tRNA synthetase [Sinorhizobium meliloti BL225C]
          Length = 442

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/198 (24%), Positives = 81/198 (40%), Gaps = 17/198 (8%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTP 297
           +E+E   HR + R      + +  +G+  W   G ++   + + +R  + +    E+  P
Sbjct: 16  KEAEIVSHRLMLRTG---MVRQQSAGIYTWLPLGKRVLDKVNAIIREEQNRSGAIELLMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LWQ+SG +D+Y   M  +K   D     R     P N      +F   +KSYR 
Sbjct: 73  TLQSAELWQESGRYDAYGKEMLRIKDRQD-----RPMLYGPTNEEMITDIFRSYVKSYRN 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF----CTKEQMFNECLKIHNLIIS 413
           LP+ L      +R+E      G MR R F   DA+ F       E  +N+    +   + 
Sbjct: 128 LPLNLYHIQLKFRDEIRPRF-GTMRSREFLMKDAYSFDLDRAGAEHAYNKMFAAY---LR 183

Query: 414 IYKDFGFEKIMVKLSTRP 431
            +   G   I ++  T P
Sbjct: 184 TFDRMGLRAIPMRADTGP 201


>gi|161618786|ref|YP_001592673.1| prolyl-tRNA synthetase [Brucella canis ATCC 23365]
 gi|254704135|ref|ZP_05165963.1| prolyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
 gi|260566616|ref|ZP_05837086.1| prolyl-tRNA synthetase [Brucella suis bv. 4 str. 40]
 gi|261754801|ref|ZP_05998510.1| prolyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
 gi|189083489|sp|A9MAJ9|SYP_BRUC2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|161335597|gb|ABX61902.1| prolyl-tRNA synthetase [Brucella canis ATCC 23365]
 gi|260156134|gb|EEW91214.1| prolyl-tRNA synthetase [Brucella suis bv. 4 str. 40]
 gi|261744554|gb|EEY32480.1| prolyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
          Length = 442

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/214 (23%), Positives = 91/214 (42%), Gaps = 25/214 (11%)

Query: 236 YFL-------EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KI 287
           YFL       +E+E   HR + R      I +  +G+  W   G K+   + + +R  + 
Sbjct: 6   YFLPILKENPKEAEIVSHRLMLRS---GMIRQQSAGIYSWLPIGLKVLNKVCTIIREEQN 62

Query: 288 KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
           +    EI  P +    LW++SG +D+Y   M  ++   +     R     P N      +
Sbjct: 63  RAGANEILMPTIQSADLWRESGRYDAYGKEMLRIQDRQE-----REMLFGPTNEEMVTDI 117

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
           F   ++SY++LP+ L      +R+E      G+MR R F   DA+ F    +     +  
Sbjct: 118 FRSYVRSYKDLPLNLYHIQWKFRDEVRPRF-GVMRSREFLMKDAYSFDLDYE--GAKMAY 174

Query: 408 HNLIISIYKDF---GFEKIMVKLSTRPEKRVGSD 438
           + + +S  + F   G + I ++  T P   +G D
Sbjct: 175 YRMFVSYLRTFARVGLQAIPMRADTGP---IGGD 205


>gi|89054478|ref|YP_509929.1| alanyl-tRNA synthetase [Jannaschia sp. CCS1]
 gi|122498736|sp|Q28QV8|SYA_JANSC RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|88864027|gb|ABD54904.1| alanyl-tRNA synthetase [Jannaschia sp. CCS1]
          Length = 884

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 7/168 (4%)

Query: 45  GKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPI-IEDG 103
           G+V + +  V +G+   +  E  R +    HS  H++ EA++    +  V  G +   D 
Sbjct: 533 GQVTEGTIKVGQGASLSVDHERRRYICA-NHSATHLLNEALRWAIGDSVVQRGSLNSRDR 591

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESK--KEAYKVEI 161
             +DF   +P ++DELAQ+E ++ ++I R++    + ++ + AR L       E Y  E+
Sbjct: 592 LRFDFSHNKPMTADELAQVEAEVNDLITRNTAVETRVMTPDDARALGAQALFGEKYGDEV 651

Query: 162 -LESIP--AKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGA 206
            + S+   A     L +     +LC G HV+ TG +  F  L + A A
Sbjct: 652 RVVSMGHHAGSGKGLDKDTYSIELCGGTHVKRTGDIGPFVILSESASA 699


>gi|320540052|ref|ZP_08039708.1| prolyl-tRNA synthetase [Serratia symbiotica str. Tucson]
 gi|320029901|gb|EFW11924.1| prolyl-tRNA synthetase [Serratia symbiotica str. Tucson]
          Length = 570

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 65/138 (47%), Gaps = 7/138 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ + +  E++ P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYTWLPTGLRVLKKVENIVREEMNNANAIEVSMPVVQPADLWQESGRWEQYGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
                D     R F L P +      +  + + SY++LP+   +  + +R+E      G+
Sbjct: 96  FVDRGD-----RPFVLGPTHEEVITDLIRNEISSYKQLPLNFFQIQTKFRDEVRPRF-GI 149

Query: 381 MRVRGFTQDDAHVFCTKE 398
           MR R F   DA+ F T +
Sbjct: 150 MRSREFLMKDAYSFHTSQ 167


>gi|182414610|ref|YP_001819676.1| prolyl-tRNA synthetase [Opitutus terrae PB90-1]
 gi|177841824|gb|ACB76076.1| prolyl-tRNA synthetase [Opitutus terrae PB90-1]
          Length = 590

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/168 (27%), Positives = 72/168 (42%), Gaps = 8/168 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           G G+  +   G ++ Q L    R ++ +    E+  P V    LWQQ   W + R  MF 
Sbjct: 37  GGGLYTYLPLGLRVMQKLTQLCREELERAGAIELWMPHVHPVELWQQGPRWAAAREIMFR 96

Query: 321 VKCADDTIKDLR--TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLH 378
              A D     R   F L P +      +    + SYR+LP    +  + +RNE      
Sbjct: 97  ADSAGDGKHGPREPEFVLGPTHEEIVTPLVKAEITSYRDLPKNFFQIATKFRNEIRPRF- 155

Query: 379 GLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK 426
           GLMR R F   DA+ F   +   +  +K +  + + Y+ F F +I V+
Sbjct: 156 GLMRAREFVMMDAYSFDVDD---DRAIKSYQAMKAAYEAF-FRRIGVQ 199


>gi|148560203|ref|YP_001258799.1| prolyl-tRNA synthetase [Brucella ovis ATCC 25840]
 gi|166980104|sp|A5VQ02|SYP_BRUO2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|148371460|gb|ABQ61439.1| prolyl-tRNA synthetase [Brucella ovis ATCC 25840]
          Length = 442

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/214 (23%), Positives = 91/214 (42%), Gaps = 25/214 (11%)

Query: 236 YFL-------EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KI 287
           YFL       +E+E   HR + R      I +  +G+  W   G K+   + + +R  + 
Sbjct: 6   YFLPILKENPKEAEIVSHRLMLRSG---MIRQQSAGIYSWLPIGLKVLNKVCTIIREEQN 62

Query: 288 KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
           +    EI  P +    LW++SG +D+Y   M  ++   +     R     P N      +
Sbjct: 63  RAGANEILMPTIQSADLWRESGRYDAYGKEMLRIQDRQE-----REMLFGPTNEEMVTDI 117

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
           F   ++SY++LP+ L      +R+E      G+MR R F   DA+ F    +     +  
Sbjct: 118 FRSYVRSYKDLPLNLYHIQWKFRDEVRPRF-GVMRSREFLMKDAYSFDLDYE--GAKMAY 174

Query: 408 HNLIISIYKDF---GFEKIMVKLSTRPEKRVGSD 438
           + + +S  + F   G + I ++  T P   +G D
Sbjct: 175 YRMFVSYLRTFARVGLQAIPMRADTGP---IGGD 205


>gi|254701588|ref|ZP_05163416.1| prolyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
 gi|261752141|ref|ZP_05995850.1| prolyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
 gi|261741894|gb|EEY29820.1| prolyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
          Length = 442

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/214 (23%), Positives = 91/214 (42%), Gaps = 25/214 (11%)

Query: 236 YFL-------EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KI 287
           YFL       +E+E   HR + R      I +  +G+  W   G K+   + + +R  + 
Sbjct: 6   YFLPILKENPKEAEIVSHRLMLRSG---MIRQQSAGIYSWLPIGLKVLNKVCTIIREEQN 62

Query: 288 KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
           +    EI  P +    LW++SG +D+Y   M  ++   +     R     P N      +
Sbjct: 63  RAGANEILMPTIQSADLWRESGRYDAYGKEMLRIQDRQE-----REMLFGPTNEEMVTDI 117

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
           F   ++SY++LP+ L      +R+E      G+MR R F   DA+ F    +     +  
Sbjct: 118 FRSYVRSYKDLPLNLYHIQWKFRDEVRPRF-GVMRSREFLMKDAYSFDLDYE--GAKMAY 174

Query: 408 HNLIISIYKDF---GFEKIMVKLSTRPEKRVGSD 438
           + + +S  + F   G + I ++  T P   +G D
Sbjct: 175 YRMFVSYLRTFARVGLQAIPMRADTGP---IGGD 205


>gi|163843095|ref|YP_001627499.1| prolyl-tRNA synthetase [Brucella suis ATCC 23445]
 gi|254706964|ref|ZP_05168792.1| prolyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|254709928|ref|ZP_05171739.1| prolyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|256031421|ref|ZP_05445035.1| prolyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
 gi|256159542|ref|ZP_05457310.1| prolyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|256254829|ref|ZP_05460365.1| prolyl-tRNA synthetase [Brucella ceti B1/94]
 gi|260168555|ref|ZP_05755366.1| prolyl-tRNA synthetase [Brucella sp. F5/99]
 gi|261222010|ref|ZP_05936291.1| prolyl-tRNA synthetase [Brucella ceti B1/94]
 gi|261314427|ref|ZP_05953624.1| prolyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|261317474|ref|ZP_05956671.1| prolyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|261758028|ref|ZP_06001737.1| prolyl-tRNA synthetase [Brucella sp. F5/99]
 gi|265988510|ref|ZP_06101067.1| prolyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
 gi|265997974|ref|ZP_06110531.1| prolyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|189083490|sp|B0CLE9|SYP_BRUSI RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|163673818|gb|ABY37929.1| prolyl-tRNA synthetase [Brucella suis ATCC 23445]
 gi|260920594|gb|EEX87247.1| prolyl-tRNA synthetase [Brucella ceti B1/94]
 gi|261296697|gb|EEY00194.1| prolyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|261303453|gb|EEY06950.1| prolyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|261738012|gb|EEY26008.1| prolyl-tRNA synthetase [Brucella sp. F5/99]
 gi|262552442|gb|EEZ08432.1| prolyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|264660707|gb|EEZ30968.1| prolyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
          Length = 442

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/214 (23%), Positives = 91/214 (42%), Gaps = 25/214 (11%)

Query: 236 YFL-------EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KI 287
           YFL       +E+E   HR + R      I +  +G+  W   G K+   + + +R  + 
Sbjct: 6   YFLPILKENPKEAEIVSHRLMLRS---GMIRQQSAGIYSWLPIGLKVLNKVCTIIREEQN 62

Query: 288 KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
           +    EI  P +    LW++SG +D+Y   M  ++   +     R     P N      +
Sbjct: 63  RAGANEILMPTIQSADLWRESGRYDAYGKEMLRIQDRQE-----REMLFGPTNEEMVTDI 117

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
           F   ++SY++LP+ L      +R+E      G+MR R F   DA+ F    +     +  
Sbjct: 118 FRSYVRSYKDLPLNLYHIQWKFRDEVRPRF-GVMRSREFLMKDAYSFDLDYE--GAKMAY 174

Query: 408 HNLIISIYKDF---GFEKIMVKLSTRPEKRVGSD 438
           + + +S  + F   G + I ++  T P   +G D
Sbjct: 175 YRMFVSYLRTFARVGLQAIPMRADTGP---IGGD 205


>gi|150019972|ref|YP_001305326.1| prolyl-tRNA synthetase [Thermosipho melanesiensis BI429]
 gi|166980168|sp|A6LJ40|SYP_THEM4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|149792493|gb|ABR29941.1| prolyl-tRNA synthetase [Thermosipho melanesiensis BI429]
          Length = 564

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 53/115 (46%), Gaps = 6/115 (5%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           +EI  P +    LW +SG WD Y   M  +K   +     R F L P +      +  + 
Sbjct: 67  QEILMPIIQPAELWIKSGRWDDYGPEMMKLKDRHN-----RDFTLGPTHEELVTELVKNE 121

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           L SY++LPV L +  + YR+E      G++R R F   DA+ F    +  +E  K
Sbjct: 122 LNSYKQLPVTLYQIANKYRDEIRPRF-GVLRAREFIMKDAYSFHDSWESLDEVYK 175


>gi|145803|gb|AAA23710.1| RNA synthesis factor (drpA) [Escherichia coli]
          Length = 516

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 67/144 (46%), Gaps = 7/144 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E++ P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELL- 94

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +  D   +  R F L P +      +  + L SY+ +P+   +  + +R+E      G+
Sbjct: 95  -RFVD---RGERPFVLGPTHEEVITDLIRNELSSYKHVPLNFYQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNEC 404
           MR R F   DA+ F T ++   E 
Sbjct: 150 MRSREFLMKDAYSFHTSQESLQET 173


>gi|37524693|ref|NP_928037.1| prolyl-tRNA synthetase [Photorhabdus luminescens subsp. laumondii
           TTO1]
 gi|81834075|sp|Q7N8M7|SYP_PHOLL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|36784118|emb|CAE12987.1| prolyl-tRNA synthetase [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 572

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 64/144 (44%), Gaps = 7/144 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + +   +R ++ +    EI+ P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYNWMPTGIRVLKKVEKIVREEMNNTGAIEISMPVVQPADLWQESGRWEQYGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
                D     R F L P +      +  + + SY++LP+ L +  + +R+E      G+
Sbjct: 96  FVDRGD-----RPFVLGPTHEEVITDLIRNEVSSYKQLPLTLFQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNEC 404
           MR R F   DA+ F   +    E 
Sbjct: 150 MRSREFLMKDAYSFHATQTSLQET 173


>gi|50290081|ref|XP_447472.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49526782|emb|CAG60409.1| unnamed protein product [Candida glabrata]
          Length = 552

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 88/190 (46%), Gaps = 17/190 (8%)

Query: 254 DLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYE--EINTPQVLDQHLWQQSGHW 311
           +L  I    SG+  W   G +    L + +R+++ +D    E++   +  +  W+++G W
Sbjct: 37  NLGFIRRTQSGLFNWLPLGLRTLHKLEALVRKRMDEDASAIEVSLSSLSPKINWEKTGRW 96

Query: 312 DSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRN 371
           D     +F VK       +   + L P       ++  + +KSY++LP+   +    YR+
Sbjct: 97  DK-SNELFKVK-----DNNAFEYCLTPTCEEDITSLMKNYIKSYKDLPITAYQISRKYRD 150

Query: 372 E--PSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY-KDFGFEKIMVKLS 428
           E  P G   GL+R R F   DA+ F + E+   + ++I N + S+Y + F   KI  K +
Sbjct: 151 EKRPRG---GLLRGREFIMKDAYSFASSEE---QAIEIFNKMDSVYDRIFSDLKIPYKAA 204

Query: 429 TRPEKRVGSD 438
                 +G D
Sbjct: 205 YADSGEIGGD 214


>gi|298373659|ref|ZP_06983648.1| phosphoribulokinase family protein [Bacteroidetes oral taxon 274
           str. F0058]
 gi|298274711|gb|EFI16263.1| phosphoribulokinase family protein [Bacteroidetes oral taxon 274
           str. F0058]
          Length = 554

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 96/203 (47%), Gaps = 9/203 (4%)

Query: 1   MPSDIKLTFP--DGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS 58
           MP  IK+     D     FP+  T  ++ + +  +L    +   +N K  DL   V    
Sbjct: 1   MPKKIKIICKNLDNREFEFPIGTTLREMYDRLKINLPYPVMMATVNYKTEDLMFQVFRP- 59

Query: 59  IEIITPEDPRSLAVIR---HSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPF 114
            +I+  +D  S A  R    S   ++A+AV+ ++P   + I   I  G+Y + + +E   
Sbjct: 60  -KIVEFKDTSSEAGYRTYVRSLTMVLAKAVKDLFPNDVLRIEHPISHGYYCNINGRETKV 118

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
           S++++A+I+ +M++IIA D P +       +A + FE++ +   V ++E +  K  V  +
Sbjct: 119 SAEKIAKIKTRMKQIIADDLPIISHETPKNEAIKRFEAQGDFNTVSLIERL-GKPFVRYF 177

Query: 175 RQGEWFDLCRGPHVRSTGQVKKF 197
             G  +D      V STG +  F
Sbjct: 178 SLGTLYDYYVSVLVPSTGYLSLF 200


>gi|256060932|ref|ZP_05451090.1| prolyl-tRNA synthetase [Brucella neotomae 5K33]
 gi|261324932|ref|ZP_05964129.1| prolyl-tRNA synthetase [Brucella neotomae 5K33]
 gi|261300912|gb|EEY04409.1| prolyl-tRNA synthetase [Brucella neotomae 5K33]
          Length = 442

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/214 (23%), Positives = 91/214 (42%), Gaps = 25/214 (11%)

Query: 236 YFL-------EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KI 287
           YFL       +E+E   HR + R      I +  +G+  W   G K+   + + +R  + 
Sbjct: 6   YFLPILKENPKEAEIVSHRLMLRS---GMIRQQSAGIYSWLPIGLKVLNKVCTIIREEQN 62

Query: 288 KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
           +    EI  P +    LW++SG +D+Y   M  ++   +     R     P N      +
Sbjct: 63  RAGANEILMPTIQSADLWRESGRYDAYGKEMLRIQDRQE-----REMLFGPTNEEMVTDI 117

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
           F   ++SY++LP+ L      +R+E      G+MR R F   DA+ F    +     +  
Sbjct: 118 FRSYVRSYKDLPLNLYHIQWKFRDEVRPRF-GVMRSREFLMKDAYSFDLDYE--GAKMAY 174

Query: 408 HNLIISIYKDF---GFEKIMVKLSTRPEKRVGSD 438
           + + +S  + F   G + I ++  T P   +G D
Sbjct: 175 YRMFVSYLRTFARVGLQAIPMRADTGP---IGGD 205


>gi|195953061|ref|YP_002121351.1| prolyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
 gi|226701299|sp|B4U8B2|SYP_HYDS0 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|195932673|gb|ACG57373.1| prolyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
          Length = 565

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 87/189 (46%), Gaps = 11/189 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+E   HR L +   +  +A   SG+       +++ + + + +R ++ K   +E+    
Sbjct: 17  ETEAASHRFLTKAGFIKQVA---SGIYELTPIAFRVLKKIENIVRDEMDKAGAQELLLTI 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW+++G WD Y   +F +K   D     R + L P +      +    ++SY++L
Sbjct: 74  LNPAELWKETGRWDYYGNELFKLKDRSD-----RDYCLGPTHEEEITDLVRKTVRSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH-NLIISIYKD 417
           P+ L +  + +R+E     +GL+R R F   DA+ F T E+       I      +I+K 
Sbjct: 129 PLNLYQIHTKFRDEKRPR-YGLIRGREFIMKDAYSFDTDEESAKNSYDIMVKAYKNIFKR 187

Query: 418 FGFEKIMVK 426
                +MVK
Sbjct: 188 LNLNILMVK 196


>gi|71064999|ref|YP_263726.1| prolyl-tRNA synthetase [Psychrobacter arcticus 273-4]
 gi|114152234|sp|Q4FUL6|SYP_PSYA2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|71037984|gb|AAZ18292.1| prolyl-tRNA synthetase, class IIa [Psychrobacter arcticus 273-4]
          Length = 572

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 7/134 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ Q +   +R ++++   +E+  P      LWQ +G ++ Y   +  
Sbjct: 36  ASGLYIWLPMGLRVLQKVERIVREEMQNIGAQEVLMPMTQPAELWQMTGRFNDYGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            K   D     R F L P +      +    L+SY++LP+   +  + +R+E      G+
Sbjct: 96  FKDRHD-----RDFVLGPTHEEVITNLAQGELRSYKQLPITFFQIQNKFRDEIRPRF-GV 149

Query: 381 MRVRGFTQDDAHVF 394
           MR R FT  DA+ F
Sbjct: 150 MRAREFTMKDAYSF 163


>gi|306843758|ref|ZP_07476357.1| prolyl-tRNA synthetase [Brucella sp. BO1]
 gi|306275949|gb|EFM57662.1| prolyl-tRNA synthetase [Brucella sp. BO1]
          Length = 442

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/214 (23%), Positives = 91/214 (42%), Gaps = 25/214 (11%)

Query: 236 YFL-------EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KI 287
           YFL       +E+E   HR + R      I +  +G+  W   G K+   + + +R  + 
Sbjct: 6   YFLPILKENPKEAEIVSHRLMLRS---GMIRQQSAGIYSWLPIGLKVLNKVCTIIREEQN 62

Query: 288 KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
           +    EI  P +    LW++SG +D+Y   M  ++   +     R     P N      +
Sbjct: 63  RAGANEILMPTIQSADLWRESGRYDAYGKEMLRIQDRQE-----REMLFGPTNEEMVTDI 117

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
           F   ++SY++LP+ L      +R+E      G+MR R F   DA+ F    +     +  
Sbjct: 118 FRSYVRSYKDLPLNLYHIQWKFRDEVRPRF-GVMRSREFLMKDAYSFDLDYE--GAKMAY 174

Query: 408 HNLIISIYKDF---GFEKIMVKLSTRPEKRVGSD 438
           + + +S  + F   G + I ++  T P   +G D
Sbjct: 175 YRMFVSYLRTFARVGLQAIPMRADTGP---IGGD 205


>gi|254713929|ref|ZP_05175740.1| prolyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|254717013|ref|ZP_05178824.1| prolyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|261218820|ref|ZP_05933101.1| prolyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|261321681|ref|ZP_05960878.1| prolyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|260923909|gb|EEX90477.1| prolyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|261294371|gb|EEX97867.1| prolyl-tRNA synthetase [Brucella ceti M644/93/1]
          Length = 442

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/214 (23%), Positives = 91/214 (42%), Gaps = 25/214 (11%)

Query: 236 YFL-------EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KI 287
           YFL       +E+E   HR + R      I +  +G+  W   G K+   + + +R  + 
Sbjct: 6   YFLPILKENPKEAEIVSHRLMLRS---GMIRQQSAGIYSWLPIGLKVLNKVCAIIREEQN 62

Query: 288 KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
           +    EI  P +    LW++SG +D+Y   M  ++   +     R     P N      +
Sbjct: 63  RAGANEILMPTIQSADLWRESGRYDAYGKEMLRIQDRQE-----REMLFGPTNEEMVTDI 117

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
           F   ++SY++LP+ L      +R+E      G+MR R F   DA+ F    +     +  
Sbjct: 118 FRSYVRSYKDLPLNLYHIQWKFRDEVRPRF-GVMRSREFLMKDAYSFDLDYE--GAKMAY 174

Query: 408 HNLIISIYKDF---GFEKIMVKLSTRPEKRVGSD 438
           + + +S  + F   G + I ++  T P   +G D
Sbjct: 175 YRMFVSYLRTFARVGLQAIPMRADTGP---IGGD 205


>gi|290579880|ref|YP_003484272.1| putative prolyl-tRNA synthetase [Streptococcus mutans NN2025]
 gi|254996779|dbj|BAH87380.1| putative prolyl-tRNA synthetase [Streptococcus mutans NN2025]
          Length = 616

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 53/102 (51%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  +++ +K      +D   F L P +      +    +
Sbjct: 68  EMLAPALLTADLWRESGRYETYGEDLYKLKN-----RDQSDFILGPTHEETFTNLIRDAV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +  + YR+E     +GL+R R F   D + F
Sbjct: 123 KSYKQLPLNLYQIQAKYRDEKR-PRNGLLRTREFIMKDGYSF 163


>gi|254718929|ref|ZP_05180740.1| prolyl-tRNA synthetase [Brucella sp. 83/13]
 gi|265983916|ref|ZP_06096651.1| prolyl-tRNA synthetase [Brucella sp. 83/13]
 gi|306838840|ref|ZP_07471671.1| prolyl-tRNA synthetase [Brucella sp. NF 2653]
 gi|264662508|gb|EEZ32769.1| prolyl-tRNA synthetase [Brucella sp. 83/13]
 gi|306406124|gb|EFM62372.1| prolyl-tRNA synthetase [Brucella sp. NF 2653]
          Length = 442

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/214 (23%), Positives = 91/214 (42%), Gaps = 25/214 (11%)

Query: 236 YFL-------EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KI 287
           YFL       +E+E   HR + R      I +  +G+  W   G K+   + + +R  + 
Sbjct: 6   YFLPILKENPKEAEIVSHRLMLRS---GMIRQQSAGIYSWLPIGLKVLNKVCTIIREEQN 62

Query: 288 KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
           +    EI  P +    LW++SG +D+Y   M  ++   +     R     P N      +
Sbjct: 63  RAGANEILMPTIQSADLWRESGRYDAYGKEMLRIQDRQE-----REMLFGPTNEEMVTDI 117

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
           F   ++SY++LP+ L      +R+E      G+MR R F   DA+ F    +     +  
Sbjct: 118 FRSYVRSYKDLPLNLYHIQWKFRDEVRPRF-GVMRSREFLMKDAYSFDLDYE--GAKMAY 174

Query: 408 HNLIISIYKDF---GFEKIMVKLSTRPEKRVGSD 438
           + + +S  + F   G + I ++  T P   +G D
Sbjct: 175 YRMFVSYLRTFARVGLQAIPMRADTGP---IGGD 205


>gi|167039934|ref|YP_001662919.1| phosphoribulokinase/uridine kinase [Thermoanaerobacter sp. X514]
 gi|300915352|ref|ZP_07132666.1| phosphoribulokinase/uridine kinase [Thermoanaerobacter sp. X561]
 gi|307724741|ref|YP_003904492.1| AAA ATPase [Thermoanaerobacter sp. X513]
 gi|166854174|gb|ABY92583.1| phosphoribulokinase/uridine kinase [Thermoanaerobacter sp. X514]
 gi|300888628|gb|EFK83776.1| phosphoribulokinase/uridine kinase [Thermoanaerobacter sp. X561]
 gi|307581802|gb|ADN55201.1| AAA ATPase [Thermoanaerobacter sp. X513]
          Length = 547

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/187 (24%), Positives = 86/187 (45%), Gaps = 3/187 (1%)

Query: 12  GSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSL 70
           G I  +P      D+A+          VA  ++ ++ DL+  V ++ ++E +        
Sbjct: 7   GDIYEYPEGTKLEDIAKDFEHLYNGIIVAAKVDNELKDLNCTVSKDSTVEFVDTTIEEGT 66

Query: 71  AVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEII 130
            + R S   +  +AV+ + P   V I   +  G Y +       ++  ++ I+K+M+EII
Sbjct: 67  RIYRRSLTFVFIKAVKELLPGATVTIEHSLGKGLYCEIHGYS-LNNKIVSMIKKRMEEII 125

Query: 131 ARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRS 190
            +D    ++ L  E+A +LF+ +    K+++ +    KE V++Y      D    P V S
Sbjct: 126 KKDFKIERKMLPKEEAIKLFKKEGLTEKIKLFKDT-DKEKVSVYYCDGTVDFFYSPCVPS 184

Query: 191 TGQVKKF 197
           TG +K F
Sbjct: 185 TGYLKVF 191


>gi|195392357|ref|XP_002054824.1| GJ22578 [Drosophila virilis]
 gi|194152910|gb|EDW68344.1| GJ22578 [Drosophila virilis]
          Length = 603

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 77/327 (23%), Positives = 122/327 (37%), Gaps = 58/327 (17%)

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
            A++P +       +   ++SYR+LP+RL ++ +V R E        +R R F   + H 
Sbjct: 206 IAVRPTSETVMYPAYAKWIQSYRDLPIRLNQWNNVVRWEFKHP-QPFLRTREFLWQEGHT 264

Query: 394 -FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
            F +K +   E L+I +L   +Y D     ++    T  EK  G D             +
Sbjct: 265 AFASKAEADKEVLEILDLYAQVYTDLLAIPVVKGRKTEKEKFAGGD---------YTTTV 315

Query: 453 DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
           +   ++S   I        G  +   FE + +D                 P      YV 
Sbjct: 316 EAFISASGRAIQGATSHHLGQNFSKMFEIVYED-----------------PETQQKQYVY 358

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVT----TITSSA 564
            +S            +G   R IG+MI     N  L L P    +QAIV     T+ +  
Sbjct: 359 QNS------------WGITTRTIGVMIMVHADNQGLVLPPHVACVQAIVVPCGITVNTKD 406

Query: 565 VEYAQEIANL------LKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASER 617
            E AQ +A        L    +  E D+R N +  +K     +K +PI I  G K+   +
Sbjct: 407 EERAQLLAACDKLEKRLNGAGVRCEGDYRDNYSPGWKFNHWELKGVPIRIELGPKDMQAK 466

Query: 618 SIGIRRFGSTTTQKVSLLDA---IPIL 641
            I   R  +     ++L D    IP L
Sbjct: 467 QIVAVRRDTGEKLTIALADVEKKIPAL 493


>gi|88807669|ref|ZP_01123181.1| prolyl-tRNA synthetase [Synechococcus sp. WH 7805]
 gi|88788883|gb|EAR20038.1| prolyl-tRNA synthetase [Synechococcus sp. WH 7805]
          Length = 598

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 78/172 (45%), Gaps = 7/172 (4%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINT--PQVLDQHLWQQSGHWDSY 314
           +I   G+G+  +    W++ + + + +R ++ D    + T  PQ+    LW++SG W  Y
Sbjct: 31  YIRRIGAGIYAYLPMMWRVLRKINAIVRDEL-DSLGALETLLPQLQPADLWERSGRWQGY 89

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
            A    +   +D  +  R   L P +      +    L+SYR+LPV L +  + +R+E  
Sbjct: 90  TAGEGIMFHLED--RQNRQLGLGPTHEEVITELAGDLLRSYRQLPVTLYQIQTKFRDEIR 147

Query: 375 GSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
               GLMR R F   DA+ F   ++ +      +      I+K  G E + V
Sbjct: 148 PRF-GLMRGREFIMKDAYSFHANQDDLEGTYQAMAAAYARIFKRCGLEAVAV 198


>gi|195018487|ref|XP_001984790.1| GH14833 [Drosophila grimshawi]
 gi|193898272|gb|EDV97138.1| GH14833 [Drosophila grimshawi]
          Length = 332

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 72/255 (28%), Positives = 121/255 (47%), Gaps = 33/255 (12%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVC-DLSDPVREG-SIEIITPEDPRSLAVIR---H 75
           +T  + A+ +S    ++AV   ++G V  D+  P++E  +++++         V +    
Sbjct: 77  STPYNCAQHLSEGHCQRAVLALLDGSVPWDVHRPLQESCTLQLLNFNVSEPHVVNKAFWR 136

Query: 76  SCAHIMAEAVQSIWPE-----VQVAIGPIIEDG-FYYDF----DKEQPFSSDELAQIEKK 125
           +C+ ++  A+Q ++ E     +     P I+ G F +D        QP +  E+  I  +
Sbjct: 137 TCSFMLGAALQRVFKEEAKLQLHSFPSPNIKSGSFVHDIVLGAQNWQP-TKAEMRAISAE 195

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN---VTLYRQGEWFDL 182
           M ++ A+D    +  +  E A+E+F  K+  YK E L SI A++N   VTLYR GE  D+
Sbjct: 196 MVKLAAQDLRIERLEVDQELAKEMF--KESHYKSEQLPSI-AQQNQSRVTLYRLGEHIDI 252

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYW---RGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            RGP V ST    +F     V+ A+     G SN     RI G A  +   L  + Y L 
Sbjct: 253 SRGPMVAST----RFLGKCTVSTAHKLTDEGPSN--AFYRIQGVALPSGFMLNHFAYGLL 306

Query: 240 E--SEKRDHRKLARE 252
           E  S+K +  +L  E
Sbjct: 307 EQRSQKLNSARLPNE 321


>gi|119719726|ref|YP_920221.1| prolyl-tRNA synthetase [Thermofilum pendens Hrk 5]
 gi|152112960|sp|A1RYD8|SYP_THEPD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|119524846|gb|ABL78218.1| prolyl-tRNA synthetase [Thermofilum pendens Hrk 5]
          Length = 482

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 80/362 (22%), Positives = 150/362 (41%), Gaps = 61/362 (16%)

Query: 288 KDDYEEINTPQVL-DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA 346
           K  +E +  P V+ +++  ++  H + ++  +F V  A D  K  R  AL+P +      
Sbjct: 61  KTGHEPVLFPLVIPEENFEKEKEHVEGFKPEVFWVTQAGDE-KLERRLALRPTSETAFYY 119

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH-VFCTKEQMFNECL 405
           ++++ ++S+R+LP++L +  SVYRNE   +   L+R R F   +AH  F T E+  N+  
Sbjct: 120 MYSYWIQSWRDLPLKLYQSVSVYRNEK--NTRPLIRGREFLWIEAHDAFATHEEALNQIR 177

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
           + + N    I++  G   + ++   RP         WD       G  DT          
Sbjct: 178 EDMENSRKVIWEKLGIPFLFLR---RPP--------WDK----FSGAEDTYA-------- 214

Query: 465 TGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF-NAFYVNSHSEKCHPVMI 523
                               D I  D +   I    +L  RF  AF V    +      +
Sbjct: 215 -------------------ADTIMPDGRVLQISSTHDLGQRFAKAFNVTFLDKDGKRKYV 255

Query: 524 HRAVFG-SIERFIGIMIE---NFKG-NLPLWLSPIQAIVTTI------TSSAVEYAQEIA 572
            +  +G  I R    +I    + KG  LP+ ++PIQ ++  I          +E  +++ 
Sbjct: 256 WQTCYGPGIWRITAALIAIHGDDKGLVLPMNVAPIQVVIVPIYYKESDKERVLEKCRKLE 315

Query: 573 NLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
            +++     +  D R E T  +K  +  +K +P+ +  G +E    ++ + R      +K
Sbjct: 316 AMIREAGYRVYLDAREEYTPGWKFNDWELKGVPVRLEVGVREVETGTVTVFRRDLRVKEK 375

Query: 632 VS 633
           V+
Sbjct: 376 VA 377


>gi|294852177|ref|ZP_06792850.1| prolyl-tRNA synthetase [Brucella sp. NVSL 07-0026]
 gi|294820766|gb|EFG37765.1| prolyl-tRNA synthetase [Brucella sp. NVSL 07-0026]
          Length = 435

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/204 (23%), Positives = 88/204 (43%), Gaps = 18/204 (8%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTP 297
           +E+E   HR + R      I +  +G+  W   G K+   + + +R  + +    EI  P
Sbjct: 9   KEAEIVSHRLMLRS---GMIRQQSAGIYSWLPIGLKVLNKVCTIIREEQNRAGANEILMP 65

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW++SG +D+Y   M  ++   +     R     P N      +F   ++SY++
Sbjct: 66  TIQSADLWRESGRYDAYGKEMLRIQDRQE-----REMLFGPTNEEMVTDIFRSYVRSYKD 120

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+ L      +R+E      G+MR R F   DA+ F    +     +  + + +S  + 
Sbjct: 121 LPLNLYHIQWKFRDEVRPRF-GVMRSREFLMKDAYSFDLDYE--GAKMAYYRMFVSYLRT 177

Query: 418 F---GFEKIMVKLSTRPEKRVGSD 438
           F   G + I ++  T P   +G D
Sbjct: 178 FARVGLQAIPMRADTGP---IGGD 198


>gi|330815470|ref|YP_004359175.1| Prolyl-tRNA synthetase [Burkholderia gladioli BSR3]
 gi|327367863|gb|AEA59219.1| Prolyl-tRNA synthetase [Burkholderia gladioli BSR3]
          Length = 578

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 7/130 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P V    LWQ+SG W+ Y   +  +K   D       F + P +      +  + +
Sbjct: 68  ELLMPAVQPAELWQESGRWEQYGPELLRIKDRKDN-----DFVIGPTHEEVITDIARNQI 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLI 411
           KSYR++PV   +  + +R+E      G+MR R F   DA+ F   +    E   K+++  
Sbjct: 123 KSYRQMPVNFYQIQTKFRDEIRPRF-GVMRGREFIMKDAYSFDKDQAGLKESYRKMYDAY 181

Query: 412 ISIYKDFGFE 421
           + ++   G E
Sbjct: 182 VRVFTRIGLE 191


>gi|307110880|gb|EFN59115.1| hypothetical protein CHLNCDRAFT_55978 [Chlorella variabilis]
          Length = 551

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 91/185 (49%), Gaps = 15/185 (8%)

Query: 244 RDHRKLAREMDLFHIAEDG--SGVIFWH-RKGWKIFQ-TLISY-MRRKIKDDYEEINTPQ 298
           +DH +L  E+DL      G  SG  F++ R    + +  L+++ M+R +   +  I TP 
Sbjct: 233 KDHLQLGEELDLIDFETGGVVSGAKFYYLRNEAALLELALVNWTMQRVVAAGFTPIITPD 292

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++ + ++++ G     RA+   +    D+   L   A  P+   G VA+    + +  +L
Sbjct: 293 LVRESVFEKCGFQP--RADNTQIYSVQDSAMCLTGTAEIPL---GGVAMDR--ILAEAQL 345

Query: 359 PVRLAEFGSVYRNEP--SGSLH-GLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           P+R+A FG  +R E   +GS   GL RV  F++ +  V CT EQ      ++ +L + ++
Sbjct: 346 PLRMAAFGHCFRTEAGAAGSASKGLYRVHQFSKVEMFVVCTPEQSDAVHQQLLDLEVGLF 405

Query: 416 KDFGF 420
            D G 
Sbjct: 406 SDLGL 410


>gi|238918575|ref|YP_002932089.1| prolyl-tRNA synthetase [Edwardsiella ictaluri 93-146]
 gi|259511594|sp|C5B780|SYP_EDWI9 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|238868143|gb|ACR67854.1| prolyl-tRNA synthetase, putative [Edwardsiella ictaluri 93-146]
          Length = 572

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 66/146 (45%), Gaps = 11/146 (7%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE---EINTPQVLDQHLWQQSGHWDSYRANM 318
            SG+  W   G ++   + + +R ++  +Y    E++ P V    LWQ+SG W+ Y   +
Sbjct: 36  ASGLYTWLPTGLRVLNKVENIVREEM--NYAGAIEVSMPVVQPADLWQESGRWEQYGPEL 93

Query: 319 FAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLH 378
                  D     R F L P +      +  + + SY++LP+   +  + +R+E      
Sbjct: 94  LRFVDRGD-----RPFVLGPTHEEVITDLVRNEISSYKQLPLNFYQIQTKFRDEVRPRF- 147

Query: 379 GLMRVRGFTQDDAHVFCTKEQMFNEC 404
           G+MR R F   DA+ F T ++   E 
Sbjct: 148 GVMRSREFLMKDAYSFHTTQESLQET 173


>gi|149201764|ref|ZP_01878738.1| prolyl-tRNA synthetase [Roseovarius sp. TM1035]
 gi|149144812|gb|EDM32841.1| prolyl-tRNA synthetase [Roseovarius sp. TM1035]
          Length = 451

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 49/201 (24%), Positives = 87/201 (43%), Gaps = 14/201 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           E++   HR + R      I +  +G+  W   G+KI + L + +   +++  +  +  P 
Sbjct: 17  EAQIASHRLMLRA---GMIKQASAGIYSWLPLGFKILRKLENIVHEEQVRAGHIPVLMPT 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW++SG +D Y A M  +K   D     R     P N      +F   + SY++L
Sbjct: 74  LQSADLWRESGRYDDYGAEMLRIKDRHD-----RDMLYGPTNEELITDIFRAHVGSYKDL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKD 417
           P+ L      +R+E      G+MR R F   D + F  TKE   +   +     +  Y+ 
Sbjct: 129 PLTLYHIQWKFRDEVRPRF-GVMRGREFLMKDGYNFDLTKEDALHAYNRHMVSYLRTYER 187

Query: 418 FGFEKIMVKLSTRPEKRVGSD 438
            G + I ++  + P   +G D
Sbjct: 188 MGLQAIPMRADSGP---IGGD 205


>gi|320352952|ref|YP_004194291.1| prolyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
 gi|320121454|gb|ADW17000.1| prolyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
          Length = 570

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 62/133 (46%), Gaps = 7/133 (5%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG+  +   G+   Q +   +R+++ +   +EI  P V    LW++SG W  Y   +   
Sbjct: 37  SGMYTYLPMGFLALQKVTEIVRQEMNRAGAQEILMPMVQPGDLWEESGRWKKYGPELLRF 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           +   D     R + L P +      V    L+SYR+LP+ L +  + +R+E      GLM
Sbjct: 97  RDRHD-----RDYCLGPTHEEVVTDVARRELQSYRQLPINLYQIQTKFRDEIRPRF-GLM 150

Query: 382 RVRGFTQDDAHVF 394
           R R F   DA+ F
Sbjct: 151 RGREFVMKDAYSF 163


>gi|257066241|ref|YP_003152497.1| prolyl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
 gi|256798121|gb|ACV28776.1| prolyl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
          Length = 572

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 73/156 (46%), Gaps = 10/156 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R      I +  SGV  +   G K+   + + +R  +++ D  E++T  
Sbjct: 17  DAETASHKFLTRGA---FIRKQASGVYSFLPLGKKVINKIEAIVREAMENHDSIEVSTSI 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +  + +W+ SG W+++   MF +K   D     R + L P       A+    L SY++L
Sbjct: 74  LQAREIWEASGRWETFGPEMFKLKDRHD-----REYCLGPTAEEAFTALVKDELNSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           P+ + +    +R+E      G+ R R F   DA+ F
Sbjct: 129 PLNIYQIVDKFRDEKRPRF-GINRSRDFLMKDAYSF 163


>gi|295693140|ref|YP_003601750.1| prolyl-tRNA synthetase [Lactobacillus crispatus ST1]
 gi|295031246|emb|CBL50725.1| Prolyl-tRNA synthetase [Lactobacillus crispatus ST1]
          Length = 565

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 67/139 (48%), Gaps = 12/139 (8%)

Query: 287 IKDDYEEINTPQVLDQHL-----WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           I+ + ++IN P+++  HL     WQ+SG +  Y A MF +K      +  R   L P + 
Sbjct: 57  IEQEMDKINVPEMIMPHLLPATLWQESGRYKKYGAEMFKLKD-----RHGRESLLGPTHE 111

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQM 400
                +    LKSY+++P+ L +  + +R+E      GL+R R F   D + F  T++Q+
Sbjct: 112 ETFTEIIAKNLKSYKQMPLALYQIQTKFRDENRPRF-GLLRGREFVMLDGYSFAATRDQL 170

Query: 401 FNECLKIHNLIISIYKDFG 419
             +     N    I+K  G
Sbjct: 171 DEQFDDQKNAYKRIFKRAG 189


>gi|152976185|ref|YP_001375702.1| prolyl-tRNA synthetase [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|189083487|sp|A7GRE9|SYP_BACCN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|152024937|gb|ABS22707.1| prolyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98]
          Length = 566

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 79/166 (47%), Gaps = 10/166 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R ++ +    E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPLGLKVLHKVEHIIREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K  +D     R FAL   +      +    +KSY++L
Sbjct: 74  LQAAELWQESGRWYSYGSELMRMKDRND-----REFALGATHEEVITDLVRDEIKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           P+ L +  + +R+E      GL+R R F   DA+ F   ++  +E 
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEV 173


>gi|320529253|ref|ZP_08030345.1| prolyl-tRNA synthetase [Selenomonas artemidis F0399]
 gi|320138883|gb|EFW30773.1| prolyl-tRNA synthetase [Selenomonas artemidis F0399]
          Length = 570

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 79/183 (43%), Gaps = 11/183 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+E   HR L R      I +   G+  +    W+  + +   +R ++     +EI  P 
Sbjct: 17  EAEIASHRLLYRA---GLIRKSAGGMYTYLPLAWRTLRKIEQIIREEMDAAGGQEIMMPI 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW++SG W +Y A M  ++      +  R F L P +     A+    L+SY++L
Sbjct: 74  LQPAELWEESGRWGAYGAEMMRIQ-----DRHERAFCLGPTHEEMITALVRDELRSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKD 417
           PV L +    +R+E      G+MR R F   D + F    E M     K++    +++  
Sbjct: 129 PVMLYQIQDKFRDERRPRF-GVMRSREFIMQDLYSFDKDVEGMHESYRKMYEAYTNVFTR 187

Query: 418 FGF 420
            G 
Sbjct: 188 CGL 190


>gi|60683574|ref|YP_213718.1| putative phosphoribulose/uridine kinase [Bacteroides fragilis NCTC
           9343]
 gi|60495008|emb|CAH09826.1| putative phosphoribulose/uridine kinase [Bacteroides fragilis NCTC
           9343]
          Length = 554

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/184 (22%), Positives = 84/184 (45%), Gaps = 2/184 (1%)

Query: 15  KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVI 73
           K FP+ ++  D+    + +   + V+  +N +   L+  V     +E +   D   +   
Sbjct: 13  KEFPIGSSLLDIYYGFNLNFPYQVVSAKVNNRSEGLNFRVYNNKDVEFLDVRDSSGMRTY 72

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
             S   ++ +AV  ++P  ++ +   +  G++ +    +P + ++++QI+K+MQEIIA D
Sbjct: 73  VRSLCFVLYKAVSELFPNGKLFVEHPVSKGYFCNLRIGRPVTLEDVSQIKKRMQEIIAED 132

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQ 193
             + +      +A  +F  +    KV++LES         Y  G   D   G  + STG 
Sbjct: 133 ITYHRIECHTTEAVRVFSERGMNDKVKLLES-SGSIYTYYYTLGGTADYYYGNLLPSTGF 191

Query: 194 VKKF 197
           +  F
Sbjct: 192 IHLF 195


>gi|251781674|ref|YP_002995976.1| prolyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|242390303|dbj|BAH80762.1| prolyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
          Length = 618

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 53/102 (51%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  +++ +K      +D   F L P +      +    +
Sbjct: 68  EMLAPALLTADLWRESGRYETYGDDLYKLKN-----RDKSDFILGPTHEETFTTLVRDAV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +  + YR+E     +GL+R R F   D + F
Sbjct: 123 KSYKQLPLNLYQIQAKYRDEKR-PRNGLLRTREFIMKDGYSF 163


>gi|332678669|gb|AEE87798.1| Prolyl-tRNA synthetase Bacterial type [Francisella cf. novicida
           Fx1]
          Length = 565

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 80/174 (45%), Gaps = 15/174 (8%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G K+ Q + + +R ++ K    E+  P +L   L Q++  WD +   +  
Sbjct: 36  ASGIYTWMPLGLKVLQKIQNIVRDEMNKAGASELLLPSILPSELLQETHRWDKFGPELLK 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +    +     R F   P +    V +    +KSY++LP+ L +  + +R+E      G+
Sbjct: 96  LHDRHN-----RDFCYGPTHEEPIVDMARDTIKSYKQLPLNLYQIQTKFRDEIRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDFGFEKIMVKLSTRPEK 433
           MR R F   DA+ F    Q    CL+  +N + + Y +   +KI   L+ RP K
Sbjct: 150 MRAREFIMKDAYSFHENSQ----CLRNTYNTMYATYCNI-LDKI--GLAYRPVK 196


>gi|227878822|ref|ZP_03996729.1| prolyl-tRNA synthetase [Lactobacillus crispatus JV-V01]
 gi|256843344|ref|ZP_05548832.1| prolyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|256849837|ref|ZP_05555268.1| prolyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
 gi|262046917|ref|ZP_06019877.1| prolyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
 gi|293381211|ref|ZP_06627219.1| prolyl-tRNA synthetase [Lactobacillus crispatus 214-1]
 gi|312978246|ref|ZP_07789990.1| proline--tRNA ligase [Lactobacillus crispatus CTV-05]
 gi|227861570|gb|EEJ69182.1| prolyl-tRNA synthetase [Lactobacillus crispatus JV-V01]
 gi|256614764|gb|EEU19965.1| prolyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|256713326|gb|EEU28316.1| prolyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
 gi|260572899|gb|EEX29459.1| prolyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
 gi|290922251|gb|EFD99245.1| prolyl-tRNA synthetase [Lactobacillus crispatus 214-1]
 gi|310894964|gb|EFQ44034.1| proline--tRNA ligase [Lactobacillus crispatus CTV-05]
          Length = 565

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 67/139 (48%), Gaps = 12/139 (8%)

Query: 287 IKDDYEEINTPQVLDQHL-----WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           I+ + ++IN P+++  HL     WQ+SG +  Y A MF +K      +  R   L P + 
Sbjct: 57  IEQEMDKINVPEMIMPHLLPATLWQESGRYKKYGAEMFKLKD-----RHGRESLLGPTHE 111

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQM 400
                +    LKSY+++P+ L +  + +R+E      GL+R R F   D + F  T++Q+
Sbjct: 112 ETFTEIIAKNLKSYKQMPLALYQIQTKFRDENRPRF-GLLRGREFVMLDGYSFAATRDQL 170

Query: 401 FNECLKIHNLIISIYKDFG 419
             +     N    I+K  G
Sbjct: 171 DEQFDDQKNAYKRIFKRAG 189


>gi|332296932|ref|YP_004438854.1| Prolyl-tRNA synthetase [Treponema brennaborense DSM 12168]
 gi|332180035|gb|AEE15723.1| Prolyl-tRNA synthetase [Treponema brennaborense DSM 12168]
          Length = 615

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 77/179 (43%), Gaps = 8/179 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           G+G+  +   G + F+ + + +R ++      EI    V+   LW++SG WD+  A M  
Sbjct: 36  GNGLFTYLPFGLRSFRKVENIIREEMDAIGALEIKPSVVVPGELWRESGRWDTMGAGMLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +K   D     +   + P       A+    L SY++LP+   +  + YR+E     +G+
Sbjct: 96  IKNRVD-----QELVVSPTAEEAVTALIRDELSSYKQLPIVAYQINTKYRDEIR-PRYGV 149

Query: 381 MRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD 438
           MR R F   DA+ F    E +    L +      I+K  G   I V   +      GS+
Sbjct: 150 MRGREFMMKDAYSFHADAESLDKTYLAMEKAYKRIFKRLGLSVIPVSADSGAMGGSGSE 208


>gi|313891975|ref|ZP_07825576.1| proline--tRNA ligase [Dialister microaerophilus UPII 345-E]
 gi|313119618|gb|EFR42809.1| proline--tRNA ligase [Dialister microaerophilus UPII 345-E]
          Length = 574

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 6/97 (6%)

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            +WQQ+G WD Y   MF +K   +     R + L P +      + +    SY++LPV L
Sbjct: 78  EIWQQTGRWDVYGEEMFRLKDRHE-----RDYCLAPTHEELVTTLVHMDTFSYKQLPVSL 132

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQ 399
            +  + YR+E      GLMR R F   DA+ F   E+
Sbjct: 133 YQIQNKYRDEKRPRF-GLMRSREFIMKDAYTFDVDEE 168


>gi|118497952|ref|YP_899002.1| prolyl-tRNA synthetase [Francisella tularensis subsp. novicida
           U112]
 gi|194323174|ref|ZP_03056958.1| prolyl-tRNA synthetase [Francisella tularensis subsp. novicida FTE]
 gi|152112922|sp|A0Q7N3|SYP_FRATN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|118423858|gb|ABK90248.1| prolyl-tRNA synthetase [Francisella novicida U112]
 gi|194322538|gb|EDX20018.1| prolyl-tRNA synthetase [Francisella tularensis subsp. novicida FTE]
          Length = 565

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 80/174 (45%), Gaps = 15/174 (8%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G K+ Q + + +R ++ K    E+  P +L   L Q++  WD +   +  
Sbjct: 36  ASGIYTWMPLGLKVLQKIQNIVRDEMNKAGASELLLPSILPSELLQETHRWDKFGPELLK 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +    +     R F   P +    V +    +KSY++LP+ L +  + +R+E      G+
Sbjct: 96  LHDRHN-----RDFCYGPTHEEPIVDMARDTIKSYKQLPLNLYQIQTKFRDEIRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDFGFEKIMVKLSTRPEK 433
           MR R F   DA+ F    Q    CL+  +N + + Y +   +KI   L+ RP K
Sbjct: 150 MRAREFIMKDAYSFHENSQ----CLRNTYNTMYATYCNI-LDKI--GLAYRPVK 196


>gi|322392576|ref|ZP_08066036.1| proline--tRNA ligase [Streptococcus peroris ATCC 700780]
 gi|321144568|gb|EFX39969.1| proline--tRNA ligase [Streptococcus peroris ATCC 700780]
          Length = 617

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 53/102 (51%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  +++ +K  + +      F L P +     A+    +
Sbjct: 68  EMLVPALLSADLWRESGRYETYGEDLYKLKNRESS-----DFILGPTHEETFTAIVRDSV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +    YR+E     +GL+R R F   D + F
Sbjct: 123 KSYKQLPLNLYQIQPKYRDEKR-PRNGLLRTREFIMKDGYSF 163


>gi|92117720|ref|YP_577449.1| prolyl-tRNA synthetase [Nitrobacter hamburgensis X14]
 gi|123083656|sp|Q1QLA8|SYP_NITHX RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|91800614|gb|ABE62989.1| prolyl-tRNA synthetase [Nitrobacter hamburgensis X14]
          Length = 439

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 92/442 (20%), Positives = 173/442 (39%), Gaps = 65/442 (14%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTP 297
           +E+E   HR + R      + ++ +G+  W   G ++ + + + +R  + +    E+  P
Sbjct: 16  KEAEIVSHRLMLRA---GMMRQEAAGIYAWLPLGLRVLKKIEAIVREEQNRAGAIELLMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW++SG +D+Y   M  ++      +  R     P N      +F   ++SY+ 
Sbjct: 73  TLQLADLWRESGRYDAYGPEMLRIQD-----RHKRELLYGPTNEEMITEIFRSYVRSYKS 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+ L      +R+E      G+MR R F   DA+ F   E      L  + + ++  + 
Sbjct: 128 LPLNLYHIQWKFRDEQRPRF-GVMRGREFLMKDAYSFDIDE--VGARLSYNRMFVAYLRT 184

Query: 418 F---GFEKIMVKLSTRPEKRVGSD------ALWDDAEN---IMKGVLDT-IKNSSQD--- 461
           F   G + I ++  T P   +G D       L +  E+   I K VLD  +  +  D   
Sbjct: 185 FARMGLKAIPMRAETGP---IGGDLSHEFIVLAETGESGVYIDKDVLDLPVPGTDVDYDG 241

Query: 462 -------RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS- 513
                  +  T     E    G ++E  + +   R      I+V          FY  + 
Sbjct: 242 DLTPIVKQWTTAYAATEDVHDGARYEREVPEE--RRVHTRGIEVG-------QIFYFGTK 292

Query: 514 HSEKCHPVM---------IHRAVFG-SIERFIGIMIENFKGNL----PLWLSPIQAIVTT 559
           +SE    ++         IH   +G  + R +G +IE    +     P  ++P    +  
Sbjct: 293 YSESMKALVAGPDGVEQPIHGGSYGVGVSRLVGAIIEACHDDAGIKWPEAVAPFTVAILN 352

Query: 560 ITSSAVEYAQEIANL---LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASE 616
           +   A +       L   L +  + +  D  ++    K     +  IP  ++ G K  +E
Sbjct: 353 LKQGAGDTDAACERLYRELSAKGVDVLYDDTDQRAGAKFATADLIGIPWQVMVGPKGLAE 412

Query: 617 RSIGIRRFGSTTTQKVSLLDAI 638
             + I+R G  T + V+L DA+
Sbjct: 413 GKVEIKRRGDGTRENVALEDAV 434


>gi|326382934|ref|ZP_08204624.1| prolyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
 gi|326198524|gb|EGD55708.1| prolyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
          Length = 576

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/196 (24%), Positives = 85/196 (43%), Gaps = 19/196 (9%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R     +I     G+  W   G K+F+ + + +R ++     +EI  P 
Sbjct: 15  DAEVPSHKLLVRAG---YIRRAAPGIYEWLPLGLKVFRAVENLVREEMDAMGAQEILLPA 71

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L +  ++ +G W  Y   +F VK  D    D+       M  P H  +F   +K    S
Sbjct: 72  LLPRDPYETTGRWTEYGPALFRVK--DRKGADM-------MLGPTHEEIFTQLVKGEYSS 122

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS- 413
           Y++LPV L +  + YR+E      GL+R R F   D++ F   +         H      
Sbjct: 123 YKDLPVTLYQIQTKYRDEER-PRAGLLRGREFVMKDSYSFDIDDAGLQASYDAHRAAYQR 181

Query: 414 IYKDFGFEKIMVKLST 429
           I+   G + ++V  ++
Sbjct: 182 IFDRLGVKYVIVAATS 197


>gi|284008500|emb|CBA75007.1| prolyl-tRNA synthetase [Arsenophonus nasoniae]
          Length = 571

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 78/170 (45%), Gaps = 8/170 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    EI+ P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYDWLPTGVRVLRKVENIIREEMNRAGAIEISMPIVQPADLWQESGRWEQYGPELL- 94

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +  D   +  R F L P +      +  + + SY++LP+ L +  + +R+E      G+
Sbjct: 95  -RFVD---RGERPFVLGPTHEEVITDLIRNEVTSYKQLPLNLYQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFEKIMVKLST 429
           MR R F   DA+ F T +    +    ++    +I+   GF    V+  T
Sbjct: 150 MRSREFIMKDAYSFHTDQDSLQQTYDAMYAAYSAIFTRIGFNFRAVQADT 199


>gi|239831704|ref|ZP_04680033.1| prolyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301]
 gi|239823971|gb|EEQ95539.1| prolyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301]
          Length = 446

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/214 (23%), Positives = 90/214 (42%), Gaps = 25/214 (11%)

Query: 236 YFL-------EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KI 287
           YFL       +E+E   HR + R      I +  +G+  W   G K+   +   +R  + 
Sbjct: 10  YFLPILKENPKEAEIVSHRLMLRSG---MIRQQSAGIYAWLPIGLKVLNKVCDIIREEQN 66

Query: 288 KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
           +    EI  P +    LW++SG +D+Y   M  ++      +  R     P N      +
Sbjct: 67  RAGANEILMPTIQSADLWRESGRYDAYGKEMLRIQD-----RQERDMLFGPTNEEMVTDI 121

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
           F   ++SY++LP+ L      +R+E      G+MR R F   DA+ F    +     +  
Sbjct: 122 FRSYVRSYKDLPLNLYHIQWKFRDEVRPRF-GVMRSREFLMKDAYSFDLDYE--GAKMAY 178

Query: 408 HNLIISIYKDF---GFEKIMVKLSTRPEKRVGSD 438
           + + +S  + F   G + I ++  T P   +G D
Sbjct: 179 YRMFVSYLRTFARVGLQAIPMRADTGP---IGGD 209


>gi|298528346|ref|ZP_07015750.1| prolyl-tRNA synthetase [Desulfonatronospira thiodismutans ASO3-1]
 gi|298511998|gb|EFI35900.1| prolyl-tRNA synthetase [Desulfonatronospira thiodismutans ASO3-1]
          Length = 577

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/161 (23%), Positives = 73/161 (45%), Gaps = 8/161 (4%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           +G+  +   GW+  Q +   +R ++   Y  E+  P V    LW+++G W++Y   +   
Sbjct: 37  AGIYTYLPAGWRALQKISEVIRGEMNRFYAIELLMPAVQPGDLWKETGRWEAYGKELLRF 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           +   D     R + + P +      +    + SYR+LP+ L +  + +R+E      GLM
Sbjct: 97  RDRHD-----RDYCIGPTHEEVITDLIRREVSSYRQLPLNLYQIQTKFRDEIRPRF-GLM 150

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDFGFE 421
           R R F   DA+ F   E    +  + +    +SI++  G +
Sbjct: 151 RGREFIMKDAYSFDKDEAGAAQSYEWMRQAYVSIFEKLGLQ 191


>gi|84517390|ref|ZP_01004743.1| alanyl-tRNA synthetase [Loktanella vestfoldensis SKA53]
 gi|84508754|gb|EAQ05218.1| alanyl-tRNA synthetase [Loktanella vestfoldensis SKA53]
          Length = 884

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 67/143 (46%), Gaps = 6/143 (4%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPI-IEDGFYYDFDKEQPFSSDELAQIEKKM 126
           R+     HS  H++ EA++    +     G +   D   +DF   +P S+DELAQIE+ +
Sbjct: 553 RAAVQANHSATHLLNEALRETLGDHIAQRGSLNAPDRLRFDFSHTKPVSADELAQIERDV 612

Query: 127 QEIIARDSPFLKQYLSHEKARELFESK--KEAYKVEI-LESIPAKENVTLYRQGEWF--D 181
             +I +++    + ++ + AR L       E Y  E+ + S+  K+       G  +  +
Sbjct: 613 NALIRQNTRVETRIMAPDDARALGAQALFGEKYGDEVRVVSMGRKDGSGKGAAGNTYSLE 672

Query: 182 LCRGPHVRSTGQVKKFFKLMKVA 204
           LC G HVR  G++  F  L   A
Sbjct: 673 LCGGTHVRQLGEIGAFVALGDAA 695


>gi|323126466|gb|ADX23763.1| prolyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis ATCC 12394]
          Length = 618

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 53/102 (51%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  +++ +K      +D   F L P +      +    +
Sbjct: 68  EMLAPALLTADLWRESGRYETYGDDLYKLKN-----RDKSDFILGPTHEETFTTLVRDAV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +  + YR+E     +GL+R R F   D + F
Sbjct: 123 KSYKQLPLNLYQIQAKYRDEKR-PRNGLLRTREFIMKDGYSF 163


>gi|320105902|ref|YP_004181492.1| prolyl-tRNA synthetase [Terriglobus saanensis SP1PR4]
 gi|319924423|gb|ADV81498.1| prolyl-tRNA synthetase [Terriglobus saanensis SP1PR4]
          Length = 613

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/153 (24%), Positives = 74/153 (48%), Gaps = 6/153 (3%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           ++ + G+G+  +     +    +++ +R ++    +E+  P +    +WQ+SG W     
Sbjct: 59  YVRQLGAGLYSYLFLATRSINKIVAIVREEMDRIGQEMYLPALNPAEVWQESGRWTGMGD 118

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
           NMF +K  D    DL    L   +     ++    ++SY++LP    +  + +R+EP   
Sbjct: 119 NMFRLK--DRKGADL---CLGMTHEEVMTSIARSEIRSYKQLPQIWYQIQTKFRDEPRPK 173

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
             GL+RVR FT  D++ F   E+  +   K+H+
Sbjct: 174 -SGLLRVRQFTMKDSYSFDLNEEGLDVSYKLHD 205


>gi|217966477|ref|YP_002351983.1| phosphoribulokinase/uridine kinase [Dictyoglomus turgidum DSM 6724]
 gi|217335576|gb|ACK41369.1| phosphoribulokinase/uridine kinase [Dictyoglomus turgidum DSM 6724]
          Length = 555

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 83/160 (51%), Gaps = 3/160 (1%)

Query: 39  VAVAINGKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIG 97
           VAV ++G +  L+  V + + ++II         ++  S   ++  AV  + P+ +V + 
Sbjct: 42  VAVKVDGNIETLNYIVEDDTKLDIIGSRSNIGRRILERSYIFLLNFAVSLVMPDQRVLVE 101

Query: 98  PIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAY 157
                  Y  F    P  ++++ +I+++M EI+ ++ P  K+ +S E+A ++FE + E  
Sbjct: 102 HSYHKSLYGRFRNYAP-KAEDIERIKERMMEIVEQNIPIQKKLVSKEEALKIFEERNEED 160

Query: 158 KVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
           K+ +++ IP KE + LY   + ++    P V ST  +K F
Sbjct: 161 KIRLIKYIPFKE-IPLYYIDDHYEYSFLPLVPSTSFLKTF 199


>gi|307267271|ref|ZP_07548772.1| phosphoribulokinase/uridine kinase [Thermoanaerobacter wiegelii
           Rt8.B1]
 gi|306917699|gb|EFN47972.1| phosphoribulokinase/uridine kinase [Thermoanaerobacter wiegelii
           Rt8.B1]
          Length = 547

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/187 (24%), Positives = 86/187 (45%), Gaps = 3/187 (1%)

Query: 12  GSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSL 70
           G+I  +P      ++A+          VA  ++ ++ DL+  V ++ ++E +        
Sbjct: 7   GNIYKYPGGTKLENIAKKFEHLYNGIIVAAKVDNELVDLNCTVSKDSTVEFVDTTIEEGT 66

Query: 71  AVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEII 130
            + R S   +  +AV+ + P   V I   +  G Y +       ++  ++ I+K+M+EII
Sbjct: 67  RIYRRSLTFVFIKAVKELLPGATVTIEHSLGKGLYCEIHGYS-LNNKIVSMIKKRMEEII 125

Query: 131 ARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRS 190
            +D    ++ L  E+A +LFE +    KV++ +    K+ V +Y      D    P V S
Sbjct: 126 EKDLKIERKMLPKEEAIKLFEKEGLTEKVKLFKDT-DKDKVPVYYCDGTVDFFYSPCVPS 184

Query: 191 TGQVKKF 197
           TG +K F
Sbjct: 185 TGYLKVF 191


>gi|254374768|ref|ZP_04990249.1| hypothetical protein FTDG_00943 [Francisella novicida GA99-3548]
 gi|151572487|gb|EDN38141.1| hypothetical protein FTDG_00943 [Francisella novicida GA99-3548]
          Length = 565

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 80/174 (45%), Gaps = 15/174 (8%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G K+ Q + + +R ++ K    E+  P +L   L Q++  WD +   +  
Sbjct: 36  ASGIYTWMPLGLKVLQKIQNIVRDEMNKAGASELLLPSILPSELLQETHRWDKFGPELLK 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +    +     R F   P +    V +    +KSY++LP+ L +  + +R+E      G+
Sbjct: 96  LHDRHN-----RDFCYGPTHEEPIVDMARDTIKSYKQLPLNLYQIQTKFRDEIRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDFGFEKIMVKLSTRPEK 433
           MR R F   DA+ F    Q    CL+  +N + + Y +   +KI   L+ RP K
Sbjct: 150 MRAREFIMKDAYSFHENSQ----CLRNTYNTMYATYCNI-LDKI--GLAYRPVK 196


>gi|134301543|ref|YP_001121511.1| prolyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           WY96-3418]
 gi|166980125|sp|A4IWT9|SYP_FRATW RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|134049320|gb|ABO46391.1| prolyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           WY96-3418]
          Length = 565

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 80/174 (45%), Gaps = 15/174 (8%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G K+ Q + + +R ++ K    E+  P +L   L Q++  WD +   +  
Sbjct: 36  ASGIYTWMPLGLKVLQKIQNIVRDEMNKAGASELLLPSILPSELLQETHRWDKFGPELLK 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +    +     R F   P +    V +    +KSY++LP+ L +  + +R+E      G+
Sbjct: 96  LHDRHN-----RDFCYGPTHEEPIVDMARDTIKSYKQLPLNLYQIQTKFRDEIRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDFGFEKIMVKLSTRPEK 433
           MR R F   DA+ F    Q    CL+  +N + + Y +   +KI   L+ RP K
Sbjct: 150 MRAREFIMKDAYSFHENSQ----CLRNTYNTMYATYCNI-LDKI--GLAYRPVK 196


>gi|53715632|ref|YP_101624.1| uridine kinase [Bacteroides fragilis YCH46]
 gi|253566555|ref|ZP_04844008.1| uridine kinase [Bacteroides sp. 3_2_5]
 gi|265767423|ref|ZP_06095089.1| uridine kinase [Bacteroides sp. 2_1_16]
 gi|52218497|dbj|BAD51090.1| uridine kinase [Bacteroides fragilis YCH46]
 gi|251944727|gb|EES85202.1| uridine kinase [Bacteroides sp. 3_2_5]
 gi|263252728|gb|EEZ24240.1| uridine kinase [Bacteroides sp. 2_1_16]
 gi|301165088|emb|CBW24656.1| putative phosphoribulose/uridine kinase [Bacteroides fragilis 638R]
          Length = 557

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/184 (22%), Positives = 84/184 (45%), Gaps = 2/184 (1%)

Query: 15  KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVI 73
           K FP+ ++  D+    + +   + V+  +N +   L+  V     +E +   D   +   
Sbjct: 16  KEFPIGSSLLDIYYGFNLNFPYQVVSAKVNNRSEGLNFRVYNNKDVEFLDVRDSSGMRTY 75

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
             S   ++ +AV  ++P  ++ +   +  G++ +    +P + ++++QI+K+MQEIIA D
Sbjct: 76  VRSLCFVLYKAVSELFPNGKLFVEHPVSKGYFCNLRIGRPVTLEDVSQIKKRMQEIIAED 135

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQ 193
             + +      +A  +F  +    KV++LES         Y  G   D   G  + STG 
Sbjct: 136 ITYHRIECHTTEAVRVFSERGMNDKVKLLES-SGSIYTYYYTLGGTADYYYGNLLPSTGF 194

Query: 194 VKKF 197
           +  F
Sbjct: 195 IHLF 198


>gi|300724773|ref|YP_003714098.1| proline tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
 gi|297631315|emb|CBJ92010.1| proline tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
          Length = 573

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/162 (24%), Positives = 75/162 (46%), Gaps = 8/162 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E++ P V    LW +SG W+ Y   +  
Sbjct: 36  ASGLYNWMPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWLESGRWEQYGPELL- 94

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +  D   +  R F L P +      +  + + SY++LP+ L +  + +R+E      G+
Sbjct: 95  -RFVD---RGERPFVLGPTHEEVITDLVRNEVTSYKQLPLNLFQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFE 421
           MR R F   DA+ F T ++   E   K++     I+   G +
Sbjct: 150 MRSREFIMKDAYSFHTSQESLQETYDKMYAAYSKIFTRIGLD 191


>gi|312137261|ref|YP_004004598.1| prolyl-tRNA synthetase [Methanothermus fervidus DSM 2088]
 gi|311224980|gb|ADP77836.1| prolyl-tRNA synthetase [Methanothermus fervidus DSM 2088]
          Length = 466

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 84/386 (21%), Positives = 155/386 (40%), Gaps = 57/386 (14%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVL-DQHLWQQSGHWDSYRANMFAVK 322
           G+  W   G+KI + +I  +R+ + +D++E+  P ++ ++ L ++S H   +   ++ V 
Sbjct: 26  GMHAWLPYGFKIRKKIIETLRKLLDEDHDEVLFPLLIPEEELMKESIHIKGFEDEVYWVT 85

Query: 323 CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMR 382
                 K  R  AL+P +      +F+  ++++++LP+++ +  + +R E   +   L+R
Sbjct: 86  HGGKA-KLKRKLALRPTSETAMYPMFSLWIRTHKDLPLKVYQIVNTFRYETKHT-RPLIR 143

Query: 383 VRGFTQ-DDAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           +R  T   +AH V  T E    +  K  N+  + +   G   ++ K   RPE        
Sbjct: 144 IREITTFKEAHTVHKTLEGAEKQVKKAINIYKTFFDSLGIPYLITK---RPE-------- 192

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDF 500
           WD                             GA Y   F+ ++ D  GR  Q GTI    
Sbjct: 193 WDKF--------------------------PGAVYTIAFDTLMPD--GRTLQIGTIH--- 221

Query: 501 NLPSRFN-AFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTT 559
           NL   F+  F +   +E+      ++  +G  +R I  +I        L L P  A +  
Sbjct: 222 NLGQNFSKTFDITFETEEGKHEHAYQTCYGVSDRVIASVISIHGDEKGLCLPPKIAPIQI 281

Query: 560 ---------ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
                         +E+ + +   LK   L +  D R+     K  E  +K IP+ I  G
Sbjct: 282 VIVPIIFKETEEEVLEFCKNVEKKLKEGKLKVHLDDRDIRAGRKFYEWEMKGIPLRIEIG 341

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLD 636
            K+  +  + + R  S     V   D
Sbjct: 342 PKDIEKNKVVVVRRDSGEKMDVKFDD 367


>gi|309799607|ref|ZP_07693832.1| prolyl-tRNA synthetase [Streptococcus infantis SK1302]
 gi|308116758|gb|EFO54209.1| prolyl-tRNA synthetase [Streptococcus infantis SK1302]
          Length = 617

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 53/102 (51%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     A+    +
Sbjct: 68  EMLAPALLSADLWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFTAIVRDSV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +    YR+E     +GL+R R F   D + F
Sbjct: 123 KSYKQLPLNLYQIQPKYRDEKR-PRNGLLRTREFIMKDGYSF 163


>gi|187931393|ref|YP_001891377.1| prolyl-tRNA synthetase [Francisella tularensis subsp. mediasiatica
           FSC147]
 gi|226701291|sp|B2SFQ6|SYP_FRATM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|187712302|gb|ACD30599.1| prolyl-tRNA synthetase [Francisella tularensis subsp. mediasiatica
           FSC147]
          Length = 565

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 80/174 (45%), Gaps = 15/174 (8%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G K+ Q + + +R ++ K    E+  P +L   L Q++  WD +   +  
Sbjct: 36  ASGIYTWMPLGLKVLQKIQNIVRDEMNKAGASELLLPSILPSELLQETHRWDKFGPELLK 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +    +     R F   P +    V +    +KSY++LP+ L +  + +R+E      G+
Sbjct: 96  LHDRHN-----RDFCYGPTHEEPIVDMARDTIKSYKQLPLNLYQIQTKFRDEIRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDFGFEKIMVKLSTRPEK 433
           MR R F   DA+ F    Q    CL+  +N + + Y +   +KI   L+ RP K
Sbjct: 150 MRAREFIMKDAYSFHENSQ----CLRNTYNTMYATYCNI-LDKI--GLAYRPVK 196


>gi|254368866|ref|ZP_04984879.1| prolyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FSC022]
 gi|157121787|gb|EDO65957.1| prolyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FSC022]
          Length = 565

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 80/174 (45%), Gaps = 15/174 (8%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G K+ Q + + +R ++ K    E+  P +L   L Q++  WD +   +  
Sbjct: 36  ASGIYTWMPLGLKVLQKIQNIVRDEMNKAGASELLLPSILPSELLQETHRWDKFGPELLK 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +    +     R F   P +    V +    +KSY++LP+ L +  + +R+E      G+
Sbjct: 96  LHDRHN-----RDFCYGPTHEEPIVDMARDTIKSYKQLPLNLYQIQTKFRDEIRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDFGFEKIMVKLSTRPEK 433
           MR R F   DA+ F    Q    CL+  +N + + Y +   +KI   L+ RP K
Sbjct: 150 MRAREFIMKDAYSFHENSQ----CLRNTYNTMYATYCNI-LDKI--GLAYRPVK 196


>gi|149183492|ref|ZP_01861921.1| prolyl-tRNA synthetase [Bacillus sp. SG-1]
 gi|148848804|gb|EDL63025.1| prolyl-tRNA synthetase [Bacillus sp. SG-1]
          Length = 569

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 77/156 (49%), Gaps = 10/156 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQ 298
           ++E + H++L R      I ++ SG+  +   G K+ Q +   +R + I     E+  P 
Sbjct: 17  DAEVKSHQQLLRAG---FIRQNSSGIYSFLPLGRKVLQKVEEIIREEMINAGGVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W +Y   +  +   +D  K  R+FAL   +     ++    +KSY++L
Sbjct: 74  LQQAELWQESGRWGTYGPELMRL---EDRHK--RSFALGATHEEVITSLVRDEIKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           P+ L +  + +R+E      GL+R R F   DA+ F
Sbjct: 129 PLTLFQIQTKFRDEKRPRF-GLLRGREFIMKDAYSF 163


>gi|303236847|ref|ZP_07323426.1| phosphoribulokinase/uridine kinase family protein [Prevotella
           disiens FB035-09AN]
 gi|302483015|gb|EFL46031.1| phosphoribulokinase/uridine kinase family protein [Prevotella
           disiens FB035-09AN]
          Length = 553

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/183 (21%), Positives = 84/183 (45%), Gaps = 2/183 (1%)

Query: 16  NFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIR 74
           + P+ ++  DV  + +  +    V+  +N KV  L+  V     +E +       +    
Sbjct: 17  DVPIGSSLYDVYSAFNLKMEYGPVSAKVNNKVEGLNYRVFHNKDVEFLDLHSSSGVRTYT 76

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDS 134
            S   ++ +AV  ++P+ +V I   + +G+Y + +  +  + D++ +I K MQ II    
Sbjct: 77  RSLFMVLCKAVHDLYPKSKVIIDIPVSNGYYCNLNIGREVTEDDVNKIRKCMQSIIDAQK 136

Query: 135 PFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQV 194
           P  +   + E A ++F    +  KV++LES  +      Y+  ++ D   G  + +T  +
Sbjct: 137 PISRFETTTEDAIKMFRKLGDEAKVKLLESTGSLYTF-YYKLDDYVDYYYGSMLTNTSLI 195

Query: 195 KKF 197
           K F
Sbjct: 196 KLF 198


>gi|317497358|ref|ZP_07955681.1| alanyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
 gi|316895427|gb|EFV17586.1| alanyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 765

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 68/140 (48%), Gaps = 20/140 (14%)

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           E  R+L    HS  H++ +A++ +    V+ A      +   +DF    P S DE+A++E
Sbjct: 442 EKNRALGAKNHSATHLLQKALREVLGTHVEQAGSLNNAEHLRFDFTHFSPLSDDEIARVE 501

Query: 124 KKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGE 178
           K + E IA+D P + + +S E+A++     LF  K               + V +   G+
Sbjct: 502 KIVNEKIAQDLPVVTKVMSMEEAKKTGAMALFGEK-------------YGDEVRVVSMGD 548

Query: 179 W-FDLCRGPHVRSTGQVKKF 197
           +  +LC G HV++TG +  F
Sbjct: 549 FSVELCGGTHVKNTGAITAF 568


>gi|296877243|ref|ZP_06901283.1| proline--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
 gi|296431763|gb|EFH17570.1| proline--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
          Length = 616

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 53/102 (51%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  +++ +K  + +      F L P +     A+    +
Sbjct: 68  EMLAPALLSADLWRESGRYETYGEDLYKLKNREGS-----DFILGPTHEETFTAIVRDSV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +    YR+E     +GL+R R F   D + F
Sbjct: 123 KSYKQLPLNLYQIQPKYRDEKR-PRNGLLRTREFIMKDGYSF 163


>gi|195054655|ref|XP_001994240.1| GH23578 [Drosophila grimshawi]
 gi|193896110|gb|EDV94976.1| GH23578 [Drosophila grimshawi]
          Length = 1706

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 77/328 (23%), Positives = 122/328 (37%), Gaps = 60/328 (18%)

Query: 334  FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH- 392
             A++P +  G    +   ++SYR+LP+RL ++ +V R E        +R R F   + H 
Sbjct: 1309 IAIRPTSETGMYPAYAKWVQSYRDLPIRLNQWNNVVRWEFKHP-QPFLRTREFLWQEGHS 1367

Query: 393  VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
             F  K +   E L++  L   +Y D     ++    T  EK  G +              
Sbjct: 1368 AFANKSEAEAEVLEMLELYAQVYTDLLAIPVVKGRKTEKEKFAGGN-------------- 1413

Query: 453  DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYV 511
                                  Y    E  +  A GR  Q  T   +  N    F+  Y 
Sbjct: 1414 ----------------------YTTTVEAFI-SASGRAIQGATSHHLGQNFSKMFDIVYE 1450

Query: 512  NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVT----TITSS 563
            +  +++     +++  +G   R IG+MI     N  L L P     QAIV     T+ + 
Sbjct: 1451 DPETQQKQ--FVYQNSWGITTRTIGVMIMVHADNQGLVLPPHVACTQAIVVPCGITVNTK 1508

Query: 564  AVEYAQ------EIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASE 616
              E AQ      EI   L    +  E D+R N +  +K     +K +PI I  G K+   
Sbjct: 1509 DEERAQLLGACKEIVKNLSRAGVRCEGDYRDNYSPGWKFNHWELKGVPIRIELGPKDMQA 1568

Query: 617  RSIGIRRFGSTTTQKVSLLDA---IPIL 641
            + I   R  +     ++L D    IP L
Sbjct: 1569 KQIVAVRRDTGEKMTIALDDVEKKIPAL 1596


>gi|167767297|ref|ZP_02439350.1| hypothetical protein CLOSS21_01816 [Clostridium sp. SS2/1]
 gi|167711272|gb|EDS21851.1| hypothetical protein CLOSS21_01816 [Clostridium sp. SS2/1]
          Length = 868

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 68/140 (48%), Gaps = 20/140 (14%)

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           E  R+L    HS  H++ +A++ +    V+ A      +   +DF    P S DE+A++E
Sbjct: 545 EKNRALGAKNHSATHLLQKALREVLGTHVEQAGSLNNAEHLRFDFTHFSPLSDDEIARVE 604

Query: 124 KKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGE 178
           K + E IA+D P + + +S E+A++     LF  K               + V +   G+
Sbjct: 605 KIVNEKIAQDLPVVTKVMSMEEAKKTGAMALFGEK-------------YGDEVRVVSMGD 651

Query: 179 W-FDLCRGPHVRSTGQVKKF 197
           +  +LC G HV++TG +  F
Sbjct: 652 FSVELCGGTHVKNTGAITAF 671


>gi|89256041|ref|YP_513403.1| prolyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           LVS]
 gi|115314517|ref|YP_763240.1| prolyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           OSU18]
 gi|156502051|ref|YP_001428116.1| prolyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FTNF002-00]
 gi|167010208|ref|ZP_02275139.1| prolyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FSC200]
 gi|290953930|ref|ZP_06558551.1| prolyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           URFT1]
 gi|295312679|ref|ZP_06803424.1| prolyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           URFT1]
 gi|114152197|sp|Q2A4E9|SYP_FRATH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|122325457|sp|Q0BMT1|SYP_FRATO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|166980124|sp|A7NB07|SYP_FRATF RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|89143872|emb|CAJ79090.1| Prolyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           LVS]
 gi|115129416|gb|ABI82603.1| proline--tRNA ligase [Francisella tularensis subsp. holarctica
           OSU18]
 gi|156252654|gb|ABU61160.1| prolyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FTNF002-00]
          Length = 565

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 80/174 (45%), Gaps = 15/174 (8%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G K+ Q + + +R ++ K    E+  P +L   L Q++  WD +   +  
Sbjct: 36  ASGIYTWMPLGLKVLQKIQNIVRDEMNKAGASELLLPSILPSELLQETHRWDKFGPELLK 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +    +     R F   P +    V +    +KSY++LP+ L +  + +R+E      G+
Sbjct: 96  LHDRHN-----RDFCYGPTHEEPIVDMARDTIKSYKQLPLNLYQIQTKFRDEIRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDFGFEKIMVKLSTRPEK 433
           MR R F   DA+ F    Q    CL+  +N + + Y +   +KI   L+ RP K
Sbjct: 150 MRAREFIMKDAYSFHENSQ----CLRNTYNTMYATYCNI-LDKI--GLAYRPVK 196


>gi|322374996|ref|ZP_08049510.1| proline--tRNA ligase [Streptococcus sp. C300]
 gi|321280496|gb|EFX57535.1| proline--tRNA ligase [Streptococcus sp. C300]
          Length = 617

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 53/102 (51%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     A+    +
Sbjct: 68  EMLAPALLSADLWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFTAIVRDSV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +    YR+E     +GL+R R F   D + F
Sbjct: 123 KSYKQLPLNLYQIQPKYRDEKR-PRNGLLRTREFIMKDGYSF 163


>gi|85059898|ref|YP_455600.1| prolyl-tRNA synthetase [Sodalis glossinidius str. 'morsitans']
 gi|114152253|sp|Q2NRN0|SYP_SODGM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|84780418|dbj|BAE75195.1| prolyl-tRNA synthase [Sodalis glossinidius str. 'morsitans']
          Length = 574

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/170 (23%), Positives = 74/170 (43%), Gaps = 8/170 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E++ P V    LWQ+SG W  Y   +  
Sbjct: 36  ASGLYSWLPTGLRVLRKVENIVREEMDNAGAIEVSMPVVQPADLWQESGRWVQYGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
                 T +  R F L P +      +  + + SY++LP+   +  + +R+E      G+
Sbjct: 96  F-----TDRGARAFVLGPTHEEVITDLIRNEVSSYKQLPLNFYQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFEKIMVKLST 429
           MR R F   DA+ F T +         ++    +I+   G E   V+  T
Sbjct: 150 MRSREFVMKDAYSFHTSQASLQATYDAMYQAYSAIFTRMGLEFRAVQADT 199


>gi|311113213|ref|YP_003984435.1| proline--tRNA ligase [Rothia dentocariosa ATCC 17931]
 gi|310944707|gb|ADP41001.1| proline--tRNA ligase [Rothia dentocariosa ATCC 17931]
          Length = 605

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 44/192 (22%), Positives = 87/192 (45%), Gaps = 19/192 (9%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R     +I     GV  W   G K+ + + + +R ++     +E+  P 
Sbjct: 19  DAEVASHKLLVRAG---YIRRAAPGVYTWLPLGLKVLRKVENIVREEMNAIGAQEVLFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L +  ++ +  W+ Y  N+F  +  D    D+       +  P H  +F   +K    S
Sbjct: 76  LLPREPYEATNRWEEYGDNLF--RLQDRKGADM-------LLAPTHEEMFTLLVKDLYSS 126

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS- 413
           Y++LP+ + +  + YR+E +    GL+R R F   D++ F   ++  NE  + H      
Sbjct: 127 YKDLPLYIYQIQNKYRDE-ARPRAGLLRGREFVMKDSYSFTVDDEGLNEAYEAHRAAYQR 185

Query: 414 IYKDFGFEKIMV 425
           I+   G + ++V
Sbjct: 186 IFNRLGLDTVIV 197


>gi|62261354|gb|AAX77983.1| unknown protein [synthetic construct]
          Length = 600

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 80/174 (45%), Gaps = 15/174 (8%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G K+ Q + + +R ++ K    E+  P +L   L Q++  WD +   +  
Sbjct: 62  ASGIYTWMPLGLKVLQKIQNIVRDEMNKAGASELLLPSILPSELLQETHRWDKFGPELLK 121

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +    +     R F   P +    V +    +KSY++LP+ L +  + +R+E      G+
Sbjct: 122 LHDRHN-----RDFCYGPTHEEPIVDMARDTIKSYKQLPLNLYQIQTKFRDEIRPRF-GV 175

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDFGFEKIMVKLSTRPEK 433
           MR R F   DA+ F    Q    CL+  +N + + Y +   +KI   L+ RP K
Sbjct: 176 MRAREFIMKDAYSFHENSQ----CLRNTYNTMYATYCNI-LDKI--GLAYRPVK 222


>gi|53726087|ref|YP_104063.1| prolyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
 gi|238561266|ref|ZP_00442346.2| proline--tRNA ligase [Burkholderia mallei GB8 horse 4]
 gi|254202783|ref|ZP_04909146.1| prolyl-tRNA synthetase [Burkholderia mallei FMH]
 gi|254208125|ref|ZP_04914475.1| prolyl-tRNA synthetase [Burkholderia mallei JHU]
 gi|81823924|sp|Q62GV8|SYP_BURMA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|52429510|gb|AAU50103.1| prolyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
 gi|147747030|gb|EDK54107.1| prolyl-tRNA synthetase [Burkholderia mallei FMH]
 gi|147752019|gb|EDK59086.1| prolyl-tRNA synthetase [Burkholderia mallei JHU]
 gi|238524974|gb|EEP88404.1| proline--tRNA ligase [Burkholderia mallei GB8 horse 4]
          Length = 578

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 59/130 (45%), Gaps = 7/130 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P V    LWQ+SG W+ Y   +   K      +    F + P +      +  + +
Sbjct: 68  ELLMPAVQPAELWQESGRWEQYGPELLRFKD-----RKQNEFVIGPTHEEVVTDIARNQI 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLI 411
           KSYR++PV   +  + +R+E      G+MR R F   DA+ F    +   E   K+++  
Sbjct: 123 KSYRQMPVNFYQIQTKFRDEIRPRF-GVMRGREFIMKDAYSFDKDHESLKESYKKMYDAY 181

Query: 412 ISIYKDFGFE 421
           + I+   GFE
Sbjct: 182 VRIFTRIGFE 191


>gi|56708459|ref|YP_170355.1| prolyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110670930|ref|YP_667487.1| prolyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC198]
 gi|224457616|ref|ZP_03666089.1| prolyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|254371083|ref|ZP_04987085.1| hypothetical protein [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254875304|ref|ZP_05248014.1| prolyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|81820763|sp|Q5NF37|SYP_FRATT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|123359400|sp|Q14GJ0|SYP_FRAT1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|56604951|emb|CAG46045.1| Prolyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110321263|emb|CAL09428.1| Prolyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC198]
 gi|151569323|gb|EDN34977.1| hypothetical protein FTBG_00840 [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254841303|gb|EET19739.1| prolyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|282159660|gb|ADA79051.1| prolyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           NE061598]
          Length = 565

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 80/174 (45%), Gaps = 15/174 (8%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G K+ Q + + +R ++ K    E+  P +L   L Q++  WD +   +  
Sbjct: 36  ASGIYTWMPLGLKVLQKIQNIVRDEMNKAGASELLLPSILPSELLQETHRWDKFGPELLK 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +    +     R F   P +    V +    +KSY++LP+ L +  + +R+E      G+
Sbjct: 96  LHDRHN-----RDFCYGPTHEEPIVDMARDTIKSYKQLPLNLYQIQTKFRDEIRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDFGFEKIMVKLSTRPEK 433
           MR R F   DA+ F    Q    CL+  +N + + Y +   +KI   L+ RP K
Sbjct: 150 MRAREFIMKDAYSFHENSQ----CLRNTYNTMYATYCNI-LDKI--GLAYRPVK 196


>gi|33594237|ref|NP_881881.1| prolyl-tRNA synthetase [Bordetella pertussis Tohama I]
 gi|81836185|sp|Q7VTZ8|SYP_BORPE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|33564312|emb|CAE43613.1| prolyl-tRNA synthetase [Bordetella pertussis Tohama I]
 gi|332383651|gb|AEE68498.1| prolyl-tRNA synthetase [Bordetella pertussis CS]
          Length = 576

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 80/184 (43%), Gaps = 11/184 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQ 298
           E+E   H+ + R   +  +A    G+  +   G K+ + +   +R ++      E+  P 
Sbjct: 17  EAEIASHQLMTRAGMIRKLA---GGIYTYMPLGLKVIRKIEGIVREEMNAAGAIELLMPV 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    LW +SG W+ Y A +  +K      +  R F L+P +      +  + ++SYR+L
Sbjct: 74  VQPAELWMESGRWEQYGAELLRIKD-----RHQRDFVLQPTSEEVITDIARNEIQSYRQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI-HNLIISIYKD 417
           P+      + +R+E      GLMR R FT  DA+ F   E        I +     I++ 
Sbjct: 129 PLNFYHIQTKFRDERRPRF-GLMRGREFTMKDAYSFDRDEAGAQRSYDIMYAAYQRIFQR 187

Query: 418 FGFE 421
            G E
Sbjct: 188 LGLE 191


>gi|311744140|ref|ZP_07717946.1| proline--tRNA ligase [Aeromicrobium marinum DSM 15272]
 gi|311313270|gb|EFQ83181.1| proline--tRNA ligase [Aeromicrobium marinum DSM 15272]
          Length = 593

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/192 (23%), Positives = 86/192 (44%), Gaps = 19/192 (9%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   HR L R   +  +A    G+  W   G K+   + + +R +++    +E+  P 
Sbjct: 17  DAEVPSHRLLVRAGYVRRVA---PGIYSWLPLGLKVLARVEAIVREEMEAIGAQEVRFPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L +  ++ S  W  Y  N+F  +  D    DL       +  P H  +F   +K    S
Sbjct: 74  LLPREPYEASNRWTEYGPNLF--RLTDRKGADL-------LLGPTHEELFTLLVKDLYGS 124

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI-IS 413
           Y++LP+ + +  + YR+E +    G++R R F   D++ F   +       + H    + 
Sbjct: 125 YKDLPLSIYQIQTKYRDE-ARPRAGILRGREFIMKDSYSFDVDDAGLEASYQAHRAAYVR 183

Query: 414 IYKDFGFEKIMV 425
           I+   GFE ++V
Sbjct: 184 IFDRLGFEYVVV 195


>gi|153009733|ref|YP_001370948.1| prolyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188]
 gi|166980136|sp|A6X1L5|SYP_OCHA4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|151561621|gb|ABS15119.1| prolyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188]
          Length = 442

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 51/214 (23%), Positives = 90/214 (42%), Gaps = 25/214 (11%)

Query: 236 YFL-------EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KI 287
           YFL       +E+E   HR + R      I +  +G+  W   G K+   +   +R  + 
Sbjct: 6   YFLPILKENPKEAEIVSHRLMLRSG---MIRQQSAGIYSWLPIGLKVLNKVCDIIREEQN 62

Query: 288 KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
           +    EI  P +    LW++SG +D+Y   M  ++      +  R     P N      +
Sbjct: 63  RAGANEILMPTIQSADLWRESGRYDAYGKEMLRIQD-----RQERDMLFGPTNEEMVTDI 117

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
           F   ++SY++LP+ L      +R+E      G+MR R F   DA+ F    +     +  
Sbjct: 118 FRSYVRSYKDLPLNLYHIQWKFRDEVRPRF-GVMRSREFLMKDAYSFDLDYE--GAKMAY 174

Query: 408 HNLIISIYKDF---GFEKIMVKLSTRPEKRVGSD 438
           + + +S  + F   G + I ++  T P   +G D
Sbjct: 175 YRMFVSYLRTFARVGLQAIPMRADTGP---IGGD 205


>gi|322411037|gb|EFY01945.1| prolyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           dysgalactiae ATCC 27957]
          Length = 618

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 53/102 (51%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  +++ +K      +D   F L P +      +    +
Sbjct: 68  EMLAPALLTADLWRESGRYETYGDDLYKLKN-----RDKSDFILGPTHEETFTTLVRDAV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +  + YR+E     +GL+R R F   D + F
Sbjct: 123 KSYKQLPLNLYQIQAKYRDEKR-PRNGLLRTREFIMKDGYSF 163


>gi|322390835|ref|ZP_08064345.1| proline--tRNA ligase [Streptococcus parasanguinis ATCC 903]
 gi|321142505|gb|EFX37973.1| proline--tRNA ligase [Streptococcus parasanguinis ATCC 903]
          Length = 616

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 53/102 (51%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  +++ +K  + +      F L P +     A+    +
Sbjct: 68  EMLAPALLSADLWRESGRYETYGEDLYKLKNREGS-----DFILGPTHEETFTAIVRDSV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +    YR+E     +GL+R R F   D + F
Sbjct: 123 KSYKQLPLNLYQIQPKYRDEKR-PRNGLLRTREFIMKDGYSF 163


>gi|319945653|ref|ZP_08019905.1| proline--tRNA ligase [Streptococcus australis ATCC 700641]
 gi|319748252|gb|EFW00494.1| proline--tRNA ligase [Streptococcus australis ATCC 700641]
          Length = 616

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 53/102 (51%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  +++ +K  + +      F L P +     A+    +
Sbjct: 68  EMLAPALLSADLWRESGRYETYGEDLYKLKNREKS-----DFILGPTHEETFTAIVRDSV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +    YR+E     +GL+R R F   D + F
Sbjct: 123 KSYKQLPLNLYQIQPKYRDEKR-PRNGLLRTREFIMKDGYSF 163


>gi|304312891|ref|YP_003812489.1| Prolyl-tRNA synthetase [gamma proteobacterium HdN1]
 gi|301798624|emb|CBL46856.1| Prolyl-tRNA synthetase [gamma proteobacterium HdN1]
          Length = 574

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/162 (22%), Positives = 72/162 (44%), Gaps = 8/162 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            +G+  W   G ++ + +   +R ++ +   +E+  P      LWQ+SG + +Y   +  
Sbjct: 36  AAGLYTWTPTGLRVLRKVERIVREEMDRAGAQEVLMPVTQPAELWQESGRFQAYGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            K      +  R F L P +      +  + ++SY++LP    +  + +R+E      G+
Sbjct: 96  FKD-----RHARDFVLGPTHEEVISDLVRNNVQSYKQLPANFYQIQTKFRDETRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKI-HNLIISIYKDFGFE 421
           MR R F   D++ F   E    E  ++ +N   +I+   G E
Sbjct: 150 MRAREFLMKDSYSFHMTEDCLRETYQVMYNAYTAIFTRLGLE 191


>gi|300743963|ref|ZP_07072983.1| proline--tRNA ligase [Rothia dentocariosa M567]
 gi|300380324|gb|EFJ76887.1| proline--tRNA ligase [Rothia dentocariosa M567]
          Length = 605

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 44/192 (22%), Positives = 87/192 (45%), Gaps = 19/192 (9%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R     +I     GV  W   G K+ + + + +R ++     +E+  P 
Sbjct: 19  DAEVASHKLLVRAG---YIRRAAPGVYTWLPLGLKVLRKVENIVREEMNAIGAQEVLFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L +  ++ +  W+ Y  N+F  +  D    D+       +  P H  +F   +K    S
Sbjct: 76  LLPREPYEATNRWEEYGDNLF--RLQDRKGADM-------LLAPTHEEMFTLLVKDLYSS 126

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS- 413
           Y++LP+ + +  + YR+E +    GL+R R F   D++ F   ++  NE  + H      
Sbjct: 127 YKDLPLYIYQIQNKYRDE-ARPRAGLLRGREFVMKDSYSFTVDDEGLNEAYEAHRAAYQR 185

Query: 414 IYKDFGFEKIMV 425
           I+   G + ++V
Sbjct: 186 IFNRLGLDTVIV 197


>gi|322388633|ref|ZP_08062233.1| proline--tRNA ligase [Streptococcus infantis ATCC 700779]
 gi|321140553|gb|EFX36058.1| proline--tRNA ligase [Streptococcus infantis ATCC 700779]
          Length = 617

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 53/102 (51%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     A+    +
Sbjct: 68  EMLAPALLSADLWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFTAIVRDSV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +    YR+E     +GL+R R F   D + F
Sbjct: 123 KSYKQLPLNLYQIQPKYRDEKR-PRNGLLRTREFIMKDGYSF 163


>gi|306825925|ref|ZP_07459263.1| proline--tRNA ligase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|304431857|gb|EFM34835.1| proline--tRNA ligase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
          Length = 617

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 53/102 (51%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     A+    +
Sbjct: 68  EMLAPALLSADLWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFTAIVRDSV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +    YR+E     +GL+R R F   D + F
Sbjct: 123 KSYKQLPLNLYQIQPKYRDEKR-PRNGLLRTREFIMKDGYSF 163


>gi|229006095|ref|ZP_04163783.1| Prolyl-tRNA synthetase [Bacillus mycoides Rock1-4]
 gi|228755171|gb|EEM04528.1| Prolyl-tRNA synthetase [Bacillus mycoides Rock1-4]
          Length = 566

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 79/166 (47%), Gaps = 10/166 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R ++ +    E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPLGLKVLHKVERIVREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K  +D     R FAL   +      +    +KSY++L
Sbjct: 74  LQAAELWQESGRWYSYGSELMRMKDRND-----REFALGATHEEVITDLVRDEIKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           P+ L +  + +R+E      GL+R R F   DA+ F   ++  +E 
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEV 173


>gi|229086371|ref|ZP_04218548.1| Prolyl-tRNA synthetase [Bacillus cereus Rock3-44]
 gi|228696983|gb|EEL49791.1| Prolyl-tRNA synthetase [Bacillus cereus Rock3-44]
          Length = 566

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 79/166 (47%), Gaps = 10/166 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R ++ +    E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPLGLKVLHKVERIVREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K  +D     R FAL   +      +    +KSY++L
Sbjct: 74  LQAAELWQESGRWYSYGSELMRMKDRND-----REFALGATHEEVITDLVRDEIKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           P+ L +  + +R+E      GL+R R F   DA+ F   ++  +E 
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEV 173


>gi|270292053|ref|ZP_06198268.1| proline--tRNA ligase [Streptococcus sp. M143]
 gi|270279581|gb|EFA25423.1| proline--tRNA ligase [Streptococcus sp. M143]
          Length = 617

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 53/102 (51%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     A+    +
Sbjct: 68  EMLAPALLSADLWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFTAIVRDSV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +    YR+E     +GL+R R F   D + F
Sbjct: 123 KSYKQLPLNLYQIQPKYRDEKR-PRNGLLRTREFIMKDGYSF 163


>gi|161510954|ref|YP_089255.2| prolyl-tRNA synthetase [Mannheimia succiniciproducens MBEL55E]
 gi|114152209|sp|Q65QU0|SYP_MANSM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
          Length = 571

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 75/170 (44%), Gaps = 8/170 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ K    E+  P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYNWLPSGIRVLEKVKNIIREEMNKSGAIEVLMPVVQPAELWQESGRWEQYGLELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
                +     R F L P +      +    + SY++LP+ L +  + +R+E      G+
Sbjct: 96  FNDRGN-----RDFVLGPTHEEVITDLVRREVSSYKQLPLNLYQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
           MR R F   DA+ F  TKE +      ++    +I+   G +   V+  T
Sbjct: 150 MRSREFIMKDAYSFHTTKESLQATYDVMYQTYSNIFTRLGLDFRAVQADT 199


>gi|315918544|ref|ZP_07914784.1| prolyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
 gi|317059560|ref|ZP_07924045.1| prolyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|313685236|gb|EFS22071.1| prolyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|313692419|gb|EFS29254.1| prolyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
          Length = 569

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 77/166 (46%), Gaps = 10/166 (6%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
           +E+E   H+ L R   +  +A   SG+  +   G++  + + + +R ++ +   +E+  P
Sbjct: 16  KEAEIISHQLLLRAGMIKKLA---SGLYTYLPLGFRTLKKVENIIREEMDRAGSQELLMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LWQ+SG W+     M  +K      +  R F L P N      +  + + SY+ 
Sbjct: 73  VLQPAELWQESGRWNVMGEEMVRLKD-----RHQRDFVLGPTNEEVITDIVRNDISSYKS 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE 403
           LP+ L    +  R+E      GLMR R F   DA+ F T ++  +E
Sbjct: 128 LPINLYHIQTKVRDERRPRF-GLMRSREFIMKDAYSFHTSQESLDE 172



 Score = 40.0 bits (92), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 35/157 (22%), Positives = 67/157 (42%), Gaps = 27/157 (17%)

Query: 488 GRDWQCGTIQVDFNLPSRFN----AFYVNSHSEK------CHPVMIHRAVFGSIERFIGI 537
            R  +CG I   F L  +++    A Y++   E       C+ + + R +  +IE     
Sbjct: 404 ARGIECGHI---FKLGDKYSKALGASYLDEKGESKIMLMGCYGIGVGRTMAAAIE----- 455

Query: 538 MIENFKGNLPLWLSPIQAIVTTI------TSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
             +N+  +  +W S +   +  +       +  ++ A++I   L + HL    D R+E  
Sbjct: 456 --QNYDEHGIIWPSALAPYLVDVIPANIKNAEQMQLAEKIYEQLNAEHLDAMLDDRDERP 513

Query: 592 NYKIREHSIKKIPIIIICGDKEASE-RSIGIRRFGST 627
            +K ++  +   P  +ICG K A     + IR+ G T
Sbjct: 514 GFKFKDADLIGFPFKVICGKKAAENIVELKIRKTGET 550


>gi|254730106|ref|ZP_05188684.1| prolyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
          Length = 213

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 48/204 (23%), Positives = 88/204 (43%), Gaps = 18/204 (8%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTP 297
           +E+E   HR + R      I +  +G+  W   G K+   + + +R  + +    EI  P
Sbjct: 19  KEAEIVSHRLMLRSG---MIRQQSAGIYSWLPIGLKVLNKVCTIIREEQNRAGANEILMP 75

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW++SG +D+Y   M  ++      +  R     P N      +F   ++SY++
Sbjct: 76  TIQSADLWRESGRYDAYGKEMLRIQD-----RQKREMLFGPTNEEMVTDIFRSYVRSYKD 130

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+ L      +R+E      G+MR R F   DA+ F    +     +  + + +S  + 
Sbjct: 131 LPLNLYHIQWKFRDEVRPRF-GVMRSREFLMKDAYSFDLDYE--GAKMAYYRMFVSYLRT 187

Query: 418 F---GFEKIMVKLSTRPEKRVGSD 438
           F   G + I ++  T P   +G D
Sbjct: 188 FARVGLQAIPMRADTGP---IGGD 208


>gi|33598297|ref|NP_885940.1| prolyl-tRNA synthetase [Bordetella parapertussis 12822]
 gi|81836505|sp|Q7W481|SYP_BORPA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|33566855|emb|CAE39070.1| prolyl-tRNA synthetase [Bordetella parapertussis]
          Length = 576

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 73/160 (45%), Gaps = 10/160 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQ 298
           E+E   H+ + R   +  +A    G+  +   G K+ + +   +R ++      E+  P 
Sbjct: 17  EAEIASHQLMTRAGMIRKLA---GGIYTYMPLGLKVIRKIEGIVREEMNAAGAIELLMPV 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    LW +SG W+ Y A +  +K      +  R F L+P +      +  + ++SYR+L
Sbjct: 74  VQPAELWMESGRWEQYGAELLRIKD-----RHQRDFVLQPTSEEVITDIARNEIQSYRQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE 398
           P+      + +R+E      GLMR R FT  DA+ F   E
Sbjct: 129 PLNFYHIQTKFRDERRPRF-GLMRGREFTMKDAYSFDRDE 167


>gi|93005293|ref|YP_579730.1| prolyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
 gi|114152235|sp|Q1QDK7|SYP_PSYCK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|92392971|gb|ABE74246.1| prolyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
          Length = 572

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 7/134 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ Q +   +R ++++   +E+  P      LWQ +G ++ Y   +  
Sbjct: 36  ASGLYIWLPMGLRVLQKVERIVREEMQNIGAQEVLMPMTQPAELWQLTGRFNDYGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            K   D     R F L P +      +    L+SY++LP+   +  + +R+E      G+
Sbjct: 96  FKDRHD-----RDFVLGPTHEEVITNLAQGELRSYKQLPITFFQIQNKFRDEIRPRF-GV 149

Query: 381 MRVRGFTQDDAHVF 394
           MR R FT  DA+ F
Sbjct: 150 MRAREFTMKDAYSF 163


>gi|331267089|ref|YP_004326719.1| prolyl-tRNA synthetase [Streptococcus oralis Uo5]
 gi|326683761|emb|CBZ01379.1| prolyl-tRNA synthetase [Streptococcus oralis Uo5]
          Length = 617

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 53/102 (51%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     A+    +
Sbjct: 68  EMLAPALLSADLWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFTAIVRDSV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +    YR+E     +GL+R R F   D + F
Sbjct: 123 KSYKQLPLNLYQIQPKYRDEKR-PRNGLLRTREFIMKDGYSF 163


>gi|170742529|ref|YP_001771184.1| prolyl-tRNA synthetase [Methylobacterium sp. 4-46]
 gi|226701312|sp|B0ULM2|SYP_METS4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|168196803|gb|ACA18750.1| prolyl-tRNA synthetase [Methylobacterium sp. 4-46]
          Length = 444

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 47/205 (22%), Positives = 85/205 (41%), Gaps = 18/205 (8%)

Query: 236 YFL-------EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKI 287
           YFL       +E+E   HR + R      I ++ +G+  W   G ++   ++  +R  + 
Sbjct: 6   YFLPILRETPKEAEIVSHRLMLRAG---MIRQEAAGIYAWLPLGLRVLNRVVEVIRAEQD 62

Query: 288 KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
           +    E+  P +    LW++SG +++Y   M  ++   +     R     P N     A+
Sbjct: 63  RSGAIELLMPTIQSAELWRESGRYEAYGKEMLRIRDRHE-----REMLFGPTNEEMITAI 117

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-K 406
           F   ++SY++LP  L      +R+E      G MR R F   DA+ F   E        K
Sbjct: 118 FRSAVRSYKDLPKSLYHIQWKFRDEVRPRF-GTMRSREFLMKDAYSFDLDEAGARHAYNK 176

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRP 431
           +    +  +   G + I ++  T P
Sbjct: 177 MFVAYLRTFARLGLKAIPMRAETGP 201


>gi|33603207|ref|NP_890767.1| prolyl-tRNA synthetase [Bordetella bronchiseptica RB50]
 gi|81836865|sp|Q7WFN9|SYP_BORBR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|33568838|emb|CAE34596.1| prolyl-tRNA synthetase [Bordetella bronchiseptica RB50]
          Length = 576

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 80/184 (43%), Gaps = 11/184 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQ 298
           E+E   H+ + R   +  +A    G+  +   G K+ + +   +R ++      E+  P 
Sbjct: 17  EAEIASHQLMTRAGMIRKLA---GGIYTYMPLGLKVIRKIEGIVREEMNAAGAIELLMPV 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    LW +SG W+ Y A +  +K      +  R F L+P +      +  + ++SYR+L
Sbjct: 74  VQPAELWMESGRWEQYGAELLRIKD-----RHQRDFVLQPTSEEVITDIARNEIQSYRQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI-HNLIISIYKD 417
           P+      + +R+E      GLMR R FT  DA+ F   E        I +     I++ 
Sbjct: 129 PLNFYHIQTKFRDERRPRF-GLMRGREFTMKDAYSFDRDEAGAQRSYDIMYAAYQRIFQR 187

Query: 418 FGFE 421
            G E
Sbjct: 188 LGLE 191


>gi|157371993|ref|YP_001479982.1| prolyl-tRNA synthetase [Serratia proteamaculans 568]
 gi|166980154|sp|A8GIB4|SYP_SERP5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|157323757|gb|ABV42854.1| prolyl-tRNA synthetase [Serratia proteamaculans 568]
          Length = 572

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/139 (25%), Positives = 65/139 (46%), Gaps = 7/139 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ + +  E+  P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYTWLPTGLRVLKKVENIVREEMNNANAIEVCMPVVQPADLWQESGRWEQYGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
                D     R F L P +      +  + + SY++LP+   +  + +R+E      G+
Sbjct: 96  FVDRGD-----RPFVLGPTHEEVITDLIRNEISSYKQLPLNFFQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQ 399
           MR R F   DA+ F T ++
Sbjct: 150 MRSREFLMKDAYSFHTSQE 168


>gi|293364306|ref|ZP_06611032.1| proline--tRNA ligase [Streptococcus oralis ATCC 35037]
 gi|307702728|ref|ZP_07639680.1| prolyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
 gi|291317152|gb|EFE57579.1| proline--tRNA ligase [Streptococcus oralis ATCC 35037]
 gi|307623844|gb|EFO02829.1| prolyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
          Length = 617

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 53/102 (51%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     A+    +
Sbjct: 68  EMLAPALLSADLWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFTAIVRDSV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +    YR+E     +GL+R R F   D + F
Sbjct: 123 KSYKQLPLNLYQIQPKYRDEKR-PRNGLLRTREFIMKDGYSF 163


>gi|52308170|gb|AAU38670.1| ProS protein [Mannheimia succiniciproducens MBEL55E]
          Length = 589

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 75/170 (44%), Gaps = 8/170 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ K    E+  P V    LWQ+SG W+ Y   +  
Sbjct: 54  ASGLYNWLPSGIRVLEKVKNIIREEMNKSGAIEVLMPVVQPAELWQESGRWEQYGLELLR 113

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
                +     R F L P +      +    + SY++LP+ L +  + +R+E      G+
Sbjct: 114 FNDRGN-----RDFVLGPTHEEVITDLVRREVSSYKQLPLNLYQIQTKFRDEVRPRF-GV 167

Query: 381 MRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
           MR R F   DA+ F  TKE +      ++    +I+   G +   V+  T
Sbjct: 168 MRSREFIMKDAYSFHTTKESLQATYDVMYQTYSNIFTRLGLDFRAVQADT 217


>gi|88810462|ref|ZP_01125719.1| prolyl-tRNA synthetase [Nitrococcus mobilis Nb-231]
 gi|88792092|gb|EAR23202.1| prolyl-tRNA synthetase [Nitrococcus mobilis Nb-231]
          Length = 569

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 74/174 (42%), Gaps = 8/174 (4%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           IA  G+G+  W   G ++ + +   +R ++ +    E+  P V    LWQ+SG W+ Y  
Sbjct: 32  IARLGAGLYTWLPLGLRVLRNVERVVREEMDRIGSLEVLMPAVQPAELWQESGRWEQYGP 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            +  +K      +  R F   P +      +    + SYR+LPV   +  + +R+E    
Sbjct: 92  ELLRLKD-----RHAREFCFGPTHEEVITDLVRREIHSYRQLPVTYYQIQTKFRDEIRPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDFGFEKIMVKLST 429
             G+MR R F   DA+ F   +       + +H     I++    +   V+  T
Sbjct: 147 F-GVMRAREFLMKDAYSFHLDQASLEATYRAMHAAYSRIFQRLNLDFRAVRADT 199


>gi|306828825|ref|ZP_07462017.1| proline--tRNA ligase [Streptococcus mitis ATCC 6249]
 gi|304429003|gb|EFM32091.1| proline--tRNA ligase [Streptococcus mitis ATCC 6249]
          Length = 617

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 53/102 (51%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     A+    +
Sbjct: 68  EMLAPALLSADLWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFTAIVRDSV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +    YR+E     +GL+R R F   D + F
Sbjct: 123 KSYKQLPLNLYQIQPKYRDEKR-PRNGLLRTREFIMKDGYSF 163


>gi|228992547|ref|ZP_04152474.1| Prolyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
 gi|228998595|ref|ZP_04158182.1| Prolyl-tRNA synthetase [Bacillus mycoides Rock3-17]
 gi|228761063|gb|EEM10022.1| Prolyl-tRNA synthetase [Bacillus mycoides Rock3-17]
 gi|228767181|gb|EEM15817.1| Prolyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
          Length = 566

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 79/166 (47%), Gaps = 10/166 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R ++ +    E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPLGLKVLHKVERIVREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K  +D     R FAL   +      +    +KSY++L
Sbjct: 74  LQAAELWQESGRWYSYGSELMRMKDRND-----REFALGATHEEVITDLVRDEIKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           P+ L +  + +R+E      GL+R R F   DA+ F   ++  +E 
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEV 173


>gi|296132879|ref|YP_003640126.1| prolyl-tRNA synthetase [Thermincola sp. JR]
 gi|296031457|gb|ADG82225.1| prolyl-tRNA synthetase [Thermincola potens JR]
          Length = 579

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 63/130 (48%), Gaps = 9/130 (6%)

Query: 274 KIFQTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           K+ Q +   M RK     +E+  P +    LWQ+SG WD Y   +F +K      +  R+
Sbjct: 52  KVSQIVREEMDRK---GGQELILPIMQPAELWQESGRWDVYGDELFRLKD-----RHGRS 103

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
           FAL P +      +  + ++SY+++P+ L +  + YR+E      GLMR R F   D + 
Sbjct: 104 FALGPTHEEIITDLVRNEIRSYKQMPMLLYQIQNKYRDERRPRF-GLMRGREFIMKDLYS 162

Query: 394 FCTKEQMFNE 403
           F   E   +E
Sbjct: 163 FDRDEAGLDE 172


>gi|315612430|ref|ZP_07887343.1| proline--tRNA ligase [Streptococcus sanguinis ATCC 49296]
 gi|315315411|gb|EFU63450.1| proline--tRNA ligase [Streptococcus sanguinis ATCC 49296]
          Length = 617

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 53/102 (51%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     A+    +
Sbjct: 68  EMLAPALLSADLWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFTAIVRDSV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +    YR+E     +GL+R R F   D + F
Sbjct: 123 KSYKQLPLNLYQIQPKYRDEKR-PRNGLLRTREFIMKDGYSF 163


>gi|295677734|ref|YP_003606258.1| prolyl-tRNA synthetase [Burkholderia sp. CCGE1002]
 gi|295437577|gb|ADG16747.1| prolyl-tRNA synthetase [Burkholderia sp. CCGE1002]
          Length = 578

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 59/132 (44%), Gaps = 11/132 (8%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT--FALKPMNCPGHVAVFNH 350
           E+  P V    LWQ+SG W+ Y   +          KD R   F L P +      +  +
Sbjct: 68  ELLMPAVQPAELWQESGRWEKYGPELL-------RFKDRRQGDFVLGPTHEEVVTDIARN 120

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHN 409
            +KSYR+LPV   +  + +R+E      G+MR R F   DA+ F    +   E   K+++
Sbjct: 121 QIKSYRQLPVNFYQIQTKFRDEIRPRF-GVMRGREFIMKDAYSFDKDAEGLRESYRKMYD 179

Query: 410 LIISIYKDFGFE 421
             + I+   G E
Sbjct: 180 AYVRIFTRLGLE 191


>gi|163791590|ref|ZP_02185991.1| prolyl-tRNA synthetase [Carnobacterium sp. AT7]
 gi|159873139|gb|EDP67242.1| prolyl-tRNA synthetase [Carnobacterium sp. AT7]
          Length = 568

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 79/166 (47%), Gaps = 10/166 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+E   H+ L R     +I +  SGV  +     ++ + L + MR +  K D  E+  P 
Sbjct: 17  EAEVLSHKMLLRA---GYIRQISSGVYSYLPLANRVIEKLKTIMREEFEKIDAVEMLMPS 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L + LW++SG +++Y  ++  +K  D   +  R + L P +      +    + SY+ L
Sbjct: 74  LLPRELWEESGRYETYGDDL--MKLQD---RHGRDYLLGPTHEEAFTTLIRDEITSYKRL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           P+ L +  + +R+E      GL+R R F   DA+ F    +  +E 
Sbjct: 129 PLSLYQIQTKFRDEKRPR-SGLLRGREFIMKDAYSFHDSYESLDET 173


>gi|297156817|gb|ADI06529.1| prolyl-tRNA synthetase [Streptomyces bingchenggensis BCW-1]
          Length = 566

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 81/174 (46%), Gaps = 18/174 (10%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R     ++    +G+  W   G K+ + +   +R ++     +E+  P 
Sbjct: 21  DAETASHKLLVRA---GYVRRTSAGIWTWLPIGKKVLENVARIVREEMDAIGAQEVLLPA 77

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L +  ++ SG W+ Y   +F +K  D    D        +  P H  +F   +K    S
Sbjct: 78  LLPREPYEASGRWEEYGDLLFRIK--DRKGADY-------LLGPTHEEIFTQTVKDQCTS 128

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
           Y++LPV L +  + YR+E +    G++R R F   D++ F T ++   E  ++H
Sbjct: 129 YKDLPVILYQIQTKYRDE-ARPRSGVLRGREFQMKDSYSFDTTDEGLAESYRLH 181


>gi|238854745|ref|ZP_04645075.1| proline--tRNA ligase [Lactobacillus jensenii 269-3]
 gi|260663977|ref|ZP_05864830.1| prolyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
 gi|282932864|ref|ZP_06338261.1| proline--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|313472268|ref|ZP_07812760.1| proline--tRNA ligase [Lactobacillus jensenii 1153]
 gi|238832535|gb|EEQ24842.1| proline--tRNA ligase [Lactobacillus jensenii 269-3]
 gi|239529664|gb|EEQ68665.1| proline--tRNA ligase [Lactobacillus jensenii 1153]
 gi|260561863|gb|EEX27832.1| prolyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
 gi|281302899|gb|EFA95104.1| proline--tRNA ligase [Lactobacillus jensenii 208-1]
          Length = 565

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 73/150 (48%), Gaps = 16/150 (10%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHL-----WQQSGHW 311
           +I +  +GV  +   G+++ +       R I+++ + IN P+++  HL     WQ+SG +
Sbjct: 31  YIRQVTAGVYSYLPLGYRVLRK----AERIIEEEMDRINVPEMIMPHLLPATLWQESGRY 86

Query: 312 DSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRN 371
             Y   MF +K      +  R   L P +      +    LKSY+++P+ L +  + +R+
Sbjct: 87  YKYGDEMFKLKD-----RHGRDSLLGPTHEETFTEIIAKNLKSYKQMPLALYQIQTKFRD 141

Query: 372 EPSGSLHGLMRVRGFTQDDAHVF-CTKEQM 400
           E      GL+R R F   D + F  T+EQ+
Sbjct: 142 ENRPRF-GLLRGREFVMLDGYSFAATREQL 170


>gi|114152274|sp|Q3SH24|SYP_THIDA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
          Length = 576

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/161 (23%), Positives = 72/161 (44%), Gaps = 8/161 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           GSG+  W   G ++ + + + +R ++ +    E+  P V    LWQ++G W  +   M  
Sbjct: 36  GSGLYTWMPLGLRVLRRVEAVVREEMNRAGAIELLMPAVQPAELWQETGRWAQFGPQMLK 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +K   +     R F   P +      +    +KSYR+LP+   +  + +R+E      G+
Sbjct: 96  IKDRHE-----REFCFGPTHEEVITDLARREIKSYRQLPLNFYQIQTKFRDEIRPRF-GV 149

Query: 381 MRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGF 420
           MR R F   DA+ F  ++E +      +++    I+   G 
Sbjct: 150 MRAREFLMKDAYSFHASRESLAATYQAMYDAYGRIFTRLGL 190


>gi|238852615|ref|ZP_04643025.1| proline--tRNA ligase [Lactobacillus gasseri 202-4]
 gi|238834761|gb|EEQ26988.1| proline--tRNA ligase [Lactobacillus gasseri 202-4]
          Length = 565

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 79/165 (47%), Gaps = 8/165 (4%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
           +I +  +GV  +   G+++ +   + +  ++ + +  E+  P +L   LWQ+SG +  Y 
Sbjct: 31  YIRQVTAGVYAYLPLGYRVLRKAENIIEEEMNNINVPEMIMPHLLPATLWQESGRYKKYG 90

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
           A MF ++      +  R   L P +      +    LKSY+++P+ L +  + +R+E   
Sbjct: 91  AEMFKLQD-----RHGRESLLGPTHEETFTEIVAKNLKSYKQMPLALYQIQTKFRDENRP 145

Query: 376 SLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFG 419
              GL+R R F   D + F  T+EQ+  +     +  + I+K  G
Sbjct: 146 RF-GLLRGREFVMLDGYSFAATREQLDEQFDDQKSAYLKIFKRAG 189


>gi|190572717|ref|YP_001970562.1| prolyl-tRNA synthetase [Stenotrophomonas maltophilia K279a]
 gi|226701342|sp|B2FMR5|SYP_STRMK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|190010639|emb|CAQ44248.1| putative prolyl-tRNA synthetase [Stenotrophomonas maltophilia
           K279a]
          Length = 567

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 47/206 (22%), Positives = 86/206 (41%), Gaps = 22/206 (10%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E   HR + R   +  +A   SG+  W   G ++ + +   +R ++ +    E   P 
Sbjct: 17  DAELTSHRLMLRAGMIRKLA---SGLYTWSPLGLRVLRKVERIVREEMDRAGAVEFQIPT 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +  + LW+Q+G W  +   +  +K   D +     F   P             L SY++L
Sbjct: 74  IQPKELWEQTGRWQKFGPQLLKIKDRKDQV-----FCYSPTAEEAACDFARSELSSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-----KIHNLIIS 413
           PV   +  + +R+E      G+MR R F   DA+ F     + +ECL      + +    
Sbjct: 129 PVNFYQVQTKFRDEIRPRF-GVMRSREFLMKDAYSF----HLHDECLVREYENMKSAYSR 183

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDA 439
           I+   G +  MV+  +     +G DA
Sbjct: 184 IFTRLGLDFRMVQADS---GAIGGDA 206


>gi|42519365|ref|NP_965295.1| prolyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
 gi|81832202|sp|Q74IS2|SYP_LACJO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|41583653|gb|AAS09261.1| prolyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
          Length = 565

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 73/150 (48%), Gaps = 16/150 (10%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHL-----WQQSGHW 311
           +I +  +GV  +   G+++ +         I+++ + IN P+++  HL     WQ+SG +
Sbjct: 31  YIRQVTAGVYAYLPLGYRVLRK----AENIIEEEMDNINVPEMIMPHLLPATLWQESGRY 86

Query: 312 DSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRN 371
             Y A MF ++      +  R   L P +      +    LKSY+++P+ L +  + +R+
Sbjct: 87  KKYGAEMFKLQD-----RHGRESLLGPTHEETFTEIVAKNLKSYKQMPLALYQIQTKFRD 141

Query: 372 EPSGSLHGLMRVRGFTQDDAHVF-CTKEQM 400
           E      GL+R R F   D + F  T+EQ+
Sbjct: 142 ENRPRF-GLLRGREFVMLDGYSFAATREQL 170


>gi|294500903|ref|YP_003564603.1| prolyl-tRNA synthetase [Bacillus megaterium QM B1551]
 gi|294350840|gb|ADE71169.1| prolyl-tRNA synthetase [Bacillus megaterium QM B1551]
          Length = 565

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 71/149 (47%), Gaps = 7/149 (4%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYR 315
           ++ ++ SGV  +   G ++ Q +   +R ++ +    E+  P +    LWQ+SG W SY 
Sbjct: 31  YMRQNASGVYSFLPLGKRVLQKVEQIVREEMDRAGSVELLMPALQQAELWQESGRWYSYG 90

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
             +  +K      +  R FAL   +     ++    +KSY+ LP+ L +  + +R+E   
Sbjct: 91  PELMRMKD-----RHGREFALGATHEEVITSLLRDEVKSYKRLPLNLYQIQTKFRDEKRP 145

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
              GL+R R F   DA+ F   ++  +E 
Sbjct: 146 RF-GLLRGREFIMKDAYSFHASQESLDEV 173


>gi|302346053|ref|YP_003814406.1| phosphoribulokinase/uridine kinase family protein [Prevotella
           melaninogenica ATCC 25845]
 gi|302149920|gb|ADK96182.1| phosphoribulokinase/uridine kinase family protein [Prevotella
           melaninogenica ATCC 25845]
          Length = 555

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/181 (22%), Positives = 81/181 (44%), Gaps = 2/181 (1%)

Query: 18  PVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPEDPRSLAVIRHS 76
           P+ +T SD+ + I+  +    V+  +N KV  L   V     +E +    P  +     S
Sbjct: 21  PIGSTLSDIYKEINLQMPYGPVSAKVNNKVEGLHYRVYHNKDVEFLNLLTPSGIRTYTRS 80

Query: 77  CAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPF 136
              ++ +AV  ++P   V I   + +G+Y +       +++++ +I  +MQEII    P 
Sbjct: 81  LFLVLCKAVHDLYPTSSVVIDIPVSNGYYCNLQLGHEITTEDVDRIRTRMQEIIDAKMPI 140

Query: 137 LKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKK 196
            +   + E+A ++F    +  K ++L+S         Y   ++ D   G  + +T Q+  
Sbjct: 141 QRYETTTEEAVKMFTELGDIQKAKLLKS-SGSLYCVYYVLDDYKDYYYGSMLTNTSQLHL 199

Query: 197 F 197
           F
Sbjct: 200 F 200


>gi|24380149|ref|NP_722104.1| prolyl-tRNA synthetase [Streptococcus mutans UA159]
 gi|81845206|sp|Q8DSJ9|SYP_STRMU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|24378150|gb|AAN59410.1|AE015006_3 putative prolyl-tRNA synthetase [Streptococcus mutans UA159]
          Length = 616

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/121 (24%), Positives = 63/121 (52%), Gaps = 11/121 (9%)

Query: 279 LISYMRRKIKDDYEEINT-----PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           +I  +++ +++++++I       P +L   LW++SG + +Y  +++ +K      +D   
Sbjct: 49  VIEKIKKIMREEFDKIGAVEMLAPALLTADLWRESGRYGTYGEDLYKLKN-----RDQSD 103

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
           F L P +      +    +KSY++LP+ L +  + YR+E     +GL+R R F   D + 
Sbjct: 104 FILGPTHEETFTNLIRDAVKSYKQLPLNLYQIQAKYRDEKR-PRNGLLRTREFIMKDGYS 162

Query: 394 F 394
           F
Sbjct: 163 F 163


>gi|294634711|ref|ZP_06713243.1| proline--tRNA ligase [Edwardsiella tarda ATCC 23685]
 gi|291091887|gb|EFE24448.1| proline--tRNA ligase [Edwardsiella tarda ATCC 23685]
          Length = 572

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 68/146 (46%), Gaps = 11/146 (7%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE---EINTPQVLDQHLWQQSGHWDSYRANM 318
            SG+  W   G ++   + + +R ++  +Y    E++ P V    LWQ+SG W+ Y   +
Sbjct: 36  ASGLYTWLPTGLRVLNKVENIVREEM--NYAGAIEVSMPVVQPADLWQESGRWEQYGPEL 93

Query: 319 FAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLH 378
              +  D   +  R F L P +      +  + + SY++LP+   +  + +R+E      
Sbjct: 94  L--RFVD---RGERPFVLGPTHEEVITDLVRNEISSYKQLPLNFYQIQTKFRDEVRPRF- 147

Query: 379 GLMRVRGFTQDDAHVFCTKEQMFNEC 404
           G+MR R F   DA+ F T ++   E 
Sbjct: 148 GVMRSREFLMKDAYSFHTTQESLQET 173


>gi|260662303|ref|ZP_05863199.1| prolyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN]
 gi|260553686|gb|EEX26578.1| prolyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN]
          Length = 573

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/185 (21%), Positives = 90/185 (48%), Gaps = 14/185 (7%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E   H+ + R   ++ ++   +GV  +    +++ + +   +R ++ K    EI  P 
Sbjct: 17  DAEVLSHKMMVRAGYIYQVS---AGVWAYLPLAYRVIRKIEQIIREEMDKAGAVEILLPG 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L   LW++SG +D+Y  N+F +K   +     R F L P +     ++    + SY++L
Sbjct: 74  LLPADLWKESGRYDAYGDNLFKLKDRRE-----RDFILGPTHEETVTSILRDAIHSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+ + +    YR+E     +G++R + F   D + F   +   ++    ++L    Y++ 
Sbjct: 129 PLVVYQLQDKYRDEDR-PRYGILRGKEFEMLDGYSFSADQAGLDQA---YDLQAKAYRNI 184

Query: 419 GFEKI 423
            F++I
Sbjct: 185 -FDRI 188


>gi|161525965|ref|YP_001580977.1| prolyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|189349316|ref|YP_001944944.1| prolyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|221202408|ref|ZP_03575440.1| prolyl-tRNA synthetase [Burkholderia multivorans CGD2M]
 gi|221208132|ref|ZP_03581137.1| prolyl-tRNA synthetase [Burkholderia multivorans CGD2]
 gi|221213248|ref|ZP_03586223.1| prolyl-tRNA synthetase [Burkholderia multivorans CGD1]
 gi|226699126|sp|A9AI56|SYP_BURM1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|160343394|gb|ABX16480.1| prolyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|189333338|dbj|BAG42408.1| prolyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|221166700|gb|EED99171.1| prolyl-tRNA synthetase [Burkholderia multivorans CGD1]
 gi|221172035|gb|EEE04477.1| prolyl-tRNA synthetase [Burkholderia multivorans CGD2]
 gi|221177685|gb|EEE10100.1| prolyl-tRNA synthetase [Burkholderia multivorans CGD2M]
          Length = 578

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 58/130 (44%), Gaps = 7/130 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P V    LWQ+SG W+ Y   +   K   D       F + P +      +  + +
Sbjct: 68  ELLMPAVQPAELWQESGRWEQYGPELLRFKDRKDN-----DFVIGPTHEEVVTDIARNQI 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLI 411
           KSYR++PV   +  + +R+E      G+MR R F   DA+ F    +   E   K+++  
Sbjct: 123 KSYRQMPVNFYQIQTKFRDEIRPRF-GVMRGREFIMKDAYSFDKDAEGLRESYRKMYDAY 181

Query: 412 ISIYKDFGFE 421
           + I+   G E
Sbjct: 182 VRIFTRLGLE 191


>gi|74318130|ref|YP_315870.1| prolyl-tRNA synthetase [Thiobacillus denitrificans ATCC 25259]
 gi|74057625|gb|AAZ98065.1| prolyl-tRNA synthetase [Thiobacillus denitrificans ATCC 25259]
          Length = 579

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/161 (23%), Positives = 72/161 (44%), Gaps = 8/161 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           GSG+  W   G ++ + + + +R ++ +    E+  P V    LWQ++G W  +   M  
Sbjct: 39  GSGLYTWMPLGLRVLRRVEAVVREEMNRAGAIELLMPAVQPAELWQETGRWAQFGPQMLK 98

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +K   +     R F   P +      +    +KSYR+LP+   +  + +R+E      G+
Sbjct: 99  IKDRHE-----REFCFGPTHEEVITDLARREIKSYRQLPLNFYQIQTKFRDEIRPRF-GV 152

Query: 381 MRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGF 420
           MR R F   DA+ F  ++E +      +++    I+   G 
Sbjct: 153 MRAREFLMKDAYSFHASRESLAATYQAMYDAYGRIFTRLGL 193


>gi|254373305|ref|ZP_04988793.1| prolyl-tRNA synthetase [Francisella tularensis subsp. novicida
           GA99-3549]
 gi|151571031|gb|EDN36685.1| prolyl-tRNA synthetase [Francisella novicida GA99-3549]
          Length = 565

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 80/174 (45%), Gaps = 15/174 (8%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G K+ Q + + +R ++ K    E+  P +L   L Q++  WD +   +  
Sbjct: 36  ASGIYTWMPLGVKVLQKIQNIVRDEMNKAGASELLLPSILPSELLQETHRWDKFGPELLK 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +    +     R F   P +    V +    +KSY++LP+ L +  + +R+E      G+
Sbjct: 96  LHDRHN-----RDFCYGPTHEEPIVDMARDTIKSYKQLPLNLYQIQTKFRDEIRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDFGFEKIMVKLSTRPEK 433
           MR R F   DA+ F    Q    CL+  +N + + Y +   +KI   L+ RP K
Sbjct: 150 MRAREFIMKDAYSFHENSQ----CLRNTYNTMYATYCNI-LDKI--GLAYRPVK 196


>gi|254253311|ref|ZP_04946629.1| Prolyl-tRNA synthetase [Burkholderia dolosa AUO158]
 gi|124895920|gb|EAY69800.1| Prolyl-tRNA synthetase [Burkholderia dolosa AUO158]
          Length = 578

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 58/130 (44%), Gaps = 7/130 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P V    LWQ+SG W+ Y   +   K   D       F + P +      +  + +
Sbjct: 68  ELLMPAVQPAELWQESGRWEQYGPELLRFKDRKDN-----DFVIGPTHEEVVTDIARNQI 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLI 411
           KSYR++PV   +  + +R+E      G+MR R F   DA+ F       +E   K+++  
Sbjct: 123 KSYRQMPVNFYQIQTKFRDEIRPRF-GVMRGREFIMKDAYSFDKDAAGLDESYRKMYDAY 181

Query: 412 ISIYKDFGFE 421
           + I+   G E
Sbjct: 182 VRIFTRLGLE 191


>gi|327398599|ref|YP_004339468.1| Prolyl-tRNA synthetase [Hippea maritima DSM 10411]
 gi|327181228|gb|AEA33409.1| Prolyl-tRNA synthetase [Hippea maritima DSM 10411]
          Length = 578

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 76/166 (45%), Gaps = 14/166 (8%)

Query: 234 YLYFLEESEKR----DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-K 288
           ++Y L+E +K      H  L R   +  +A   SG+  +   G ++ + +   +R ++ K
Sbjct: 7   FIYTLKEDQKEAAIVSHNLLLRGGFILKLA---SGIYNYLPLGLRVIRKVSDIVREEMNK 63

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
              +EI    +    LW++SG W+ Y   +  +K   D     R F   P +      + 
Sbjct: 64  AGAQEILMAAIQPAELWKESGRWNDYGKELLRIKDRGD-----RDFVFGPTHEEVVTDIV 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
              +KSY+++P+ L +  + +R+E      GLMR R F   DA+ F
Sbjct: 119 RRFVKSYKQMPLNLYQIQTKFRDELRPRF-GLMRGREFIMKDAYSF 163


>gi|84489803|ref|YP_448035.1| prolyl-tRNA synthetase [Methanosphaera stadtmanae DSM 3091]
 gi|114152212|sp|Q2NFL1|SYP_METST RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|84373122|gb|ABC57392.1| ProS [Methanosphaera stadtmanae DSM 3091]
          Length = 469

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 83/384 (21%), Positives = 158/384 (41%), Gaps = 79/384 (20%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQ-HLWQQSGHWDSYRANMFAVK 322
           G+  W  +G++I +  ++ ++  +  D+EE+  P ++ Q  L +++ H   +   ++ V 
Sbjct: 26  GMSVWLPRGFQIRKYALNALQELLDKDHEEVLFPMLIPQSELAKEAIHVKGFEEEVYWVT 85

Query: 323 CADDTIKDLRT-FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
                 +DL    AL+P +      +F+  ++S+ +LP+++ +  + +R E +     L+
Sbjct: 86  KGGK--RDLNEHLALRPTSETSIYPMFSLWVRSHMDLPIKVYQTVNTFRYE-TKHTRPLI 142

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLKIHNLI----------ISIYKDFGFEKIMV--KLST 429
           RVR  T             FNE    H             I IYK F F+++ +   +S 
Sbjct: 143 RVREIT------------TFNETHTAHATEEEAEKEVMEGIEIYKTF-FDELGIPYSISK 189

Query: 430 RPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGR 489
           RPE        WD                             G+ Y   F+ I+ D  G+
Sbjct: 190 RPE--------WDKF--------------------------PGSKYTMAFDMIMPD--GK 213

Query: 490 DWQCGTIQVDFNLPSRF-NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE---NFKG- 544
             Q  T+    NL + F + F +   +E      +H+  +G  +R I  +I    + KG 
Sbjct: 214 TLQIATVH---NLGTTFAHTFDIQFENEDGTHDYVHQVCYGLSDRVIASLIAAHGDEKGL 270

Query: 545 NLPLWLSPIQAIVTTI-----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           +LP  ++P Q I+  I         + +   +  LLK++ + ++ D R      K  E  
Sbjct: 271 SLPPVVAPEQVIIIPIIFKENQDVVLNFTDNLEKLLKNNGIRVKQDKRELRPGKKYYEWE 330

Query: 600 IKKIPIIIICGDKEASERSIGIRR 623
            + +P+ I  G ++    +I I R
Sbjct: 331 KRGVPLRIEVGPRDIENNTIVINR 354


>gi|70938459|ref|XP_739899.1| hypothetical protein [Plasmodium chabaudi chabaudi]
 gi|56517239|emb|CAH81031.1| hypothetical protein PC000376.04.0 [Plasmodium chabaudi chabaudi]
          Length = 244

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 47/190 (24%), Positives = 85/190 (44%), Gaps = 33/190 (17%)

Query: 4   DIKLTFPDGSIKNFPVHATGS-DVAESISRSLAKKAVAVAI------NGKVCDLSDPV-- 54
           +I +   DGSIK    + T    +A  IS+ L++ ++   +      N  +CD+ D    
Sbjct: 58  EINIELLDGSIKIGQKNVTTPYQIASQISKKLSENSIVAKVIYLDDVNLNLCDIEDEESE 117

Query: 55  -------REG-------------SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
                  +EG              I  +  + P    V  HS AHI+  +++ I+    +
Sbjct: 118 EKHEETSQEGILWDLNVPLIGNCKINFLGIDTPEGKKVFWHSSAHILGSSLEKIYGG-YL 176

Query: 95  AIGPIIEDGFYYD-FDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESK 153
            IGP + +GFYYD +       SD+  +IE +  +++  +  F K   + E+  ELF  K
Sbjct: 177 TIGPALNEGFYYDIYLGNNSIVSDDYTKIENEYNKLVKENVEFEKMVCTKEEVLELF--K 234

Query: 154 KEAYKVEILE 163
              +K+E+++
Sbjct: 235 YNPFKIELIK 244


>gi|255722445|ref|XP_002546157.1| prolyl-tRNA synthetase [Candida tropicalis MYA-3404]
 gi|240136646|gb|EER36199.1| prolyl-tRNA synthetase [Candida tropicalis MYA-3404]
          Length = 559

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 43/164 (26%), Positives = 77/164 (46%), Gaps = 17/164 (10%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG++ W + G  I   + S +R ++ +  +EE++   +  + LWQ++G WD     +F +
Sbjct: 46  SGLVNWSKSGLLIQNKISSIIRSRMDEIGFEELSLSLISYKKLWQETGRWDK-STEIFKL 104

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE--PSGSLHG 379
           +  +        + L P          N  L+SY++LP+ + +    +RNE  P G   G
Sbjct: 105 EGDE--------YLLVPTAEEEITDYINKNLESYKQLPILMYQINPKFRNEKRPRG---G 153

Query: 380 LMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           L+R + F   DA+ F   E   N       ++ + +K FG  KI
Sbjct: 154 LLRGKEFLMKDAYSFDLDES--NAMNTYEKVVGAYHKIFGDLKI 195


>gi|329667116|gb|AEB93064.1| prolyl-tRNA synthetase [Lactobacillus johnsonii DPC 6026]
          Length = 565

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 73/150 (48%), Gaps = 16/150 (10%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHL-----WQQSGHW 311
           +I +  +GV  +   G+++ +         I+++ + IN P+++  HL     WQ+SG +
Sbjct: 31  YIRQVTAGVYAYLPLGYRVLRK----AENIIEEEMDNINVPEMIMPHLLPATLWQESGRY 86

Query: 312 DSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRN 371
             Y A MF ++      +  R   L P +      +    LKSY+++P+ L +  + +R+
Sbjct: 87  KKYGAEMFKLQD-----RHGRESLLGPTHEETFTEIVAKNLKSYKQMPLALYQIQTKFRD 141

Query: 372 EPSGSLHGLMRVRGFTQDDAHVF-CTKEQM 400
           E      GL+R R F   D + F  T+EQ+
Sbjct: 142 ENRPRF-GLLRGREFVMLDGYSFAATREQL 170


>gi|268319258|ref|YP_003292914.1| hypothetical protein FI9785_773 [Lactobacillus johnsonii FI9785]
 gi|262397633|emb|CAX66647.1| proS [Lactobacillus johnsonii FI9785]
          Length = 565

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 73/150 (48%), Gaps = 16/150 (10%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHL-----WQQSGHW 311
           +I +  +GV  +   G+++ +         I+++ + IN P+++  HL     WQ+SG +
Sbjct: 31  YIRQVTAGVYAYLPLGYRVLRK----AENIIEEEMDNINVPEMIMPHLLPATLWQESGRY 86

Query: 312 DSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRN 371
             Y A MF ++      +  R   L P +      +    LKSY+++P+ L +  + +R+
Sbjct: 87  KKYGAEMFKLQD-----RHGRESLLGPTHEETFTEIVAKNLKSYKQMPLALYQIQTKFRD 141

Query: 372 EPSGSLHGLMRVRGFTQDDAHVF-CTKEQM 400
           E      GL+R R F   D + F  T+EQ+
Sbjct: 142 ENRPRF-GLLRGREFVMLDGYSFAATREQL 170


>gi|198413603|ref|XP_002126928.1| PREDICTED: similar to prolyl-tRNA synthetase
           (mitochondrial)(putative) [Ciona intestinalis]
          Length = 435

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 75/166 (45%), Gaps = 16/166 (9%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I+    G+  +     K  + L S +  K+K+   +++    +  + +W  SG WD++  
Sbjct: 44  ISPSSKGIYHFMPPLVKSLEKLTSLIDEKMKNICAQKVQMSMLSGKDIWSLSGRWDAFGK 103

Query: 317 NMFAVKCADDTIKDLRTFALKPMN----CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE 372
            +      +          L P +    C      FN  L SYR LP+RL +  + +RNE
Sbjct: 104 ELITTNLGE------AKHCLSPTHEEAVCKVLSQTFNKFL-SYRHLPLRLYQTNTKFRNE 156

Query: 373 PSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P     GL+R R F  +D + F T ++     ++ +N + +IY++F
Sbjct: 157 PDPQ-RGLLRCREFLMNDLYTFDTTKK---AAVETYNAVCNIYEEF 198


>gi|89093619|ref|ZP_01166566.1| prolyl-tRNA synthetase [Oceanospirillum sp. MED92]
 gi|89082015|gb|EAR61240.1| prolyl-tRNA synthetase [Oceanospirillum sp. MED92]
          Length = 574

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 38/162 (23%), Positives = 68/162 (41%), Gaps = 8/162 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G +  + +   +R ++ K    E+  P V    LW++SG W+ Y   +  
Sbjct: 36  ASGLYNWLPLGLRTLRKVERIVREEMDKSGAMEVLMPAVQPAELWEESGRWEQYGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           V    +     R F + P +      +    +KSY++LP    +  + +R+E      G+
Sbjct: 96  VNDRHN-----REFCVGPTHEEVITDLIRREIKSYKQLPANFYQIQTKFRDEIRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKI-HNLIISIYKDFGFE 421
           MR R F   DA+ F   +    E   + H    +I+   G +
Sbjct: 150 MRSREFIMKDAYSFHVGQDSLQETYDVMHQTYTNIFTRLGLD 191


>gi|260757796|ref|ZP_05870144.1| prolyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
 gi|260668114|gb|EEX55054.1| prolyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
          Length = 210

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 48/204 (23%), Positives = 88/204 (43%), Gaps = 18/204 (8%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTP 297
           +E+E   HR + R      I +  +G+  W   G K+   + + +R  + +    EI  P
Sbjct: 16  KEAEIVSHRLMLRSG---MIRQQSAGIYSWLPIGLKVLNKVCTIIREEQNRAGANEILMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW++SG +D+Y   M  ++      +  R     P N      +F   ++SY++
Sbjct: 73  TIQSADLWRESGRYDAYGKEMLRIQD-----RQKREMLFGPTNEEMVTDIFRSYVRSYKD 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+ L      +R+E      G+MR R F   DA+ F    +     +  + + +S  + 
Sbjct: 128 LPLNLYHIQWKFRDEVRPRF-GVMRSREFLMKDAYSFDLDYE--GAKMAYYRMFVSYLRT 184

Query: 418 F---GFEKIMVKLSTRPEKRVGSD 438
           F   G + I ++  T P   +G D
Sbjct: 185 FARVGLQAIPMRADTGP---IGGD 205


>gi|256832247|ref|YP_003160974.1| prolyl-tRNA synthetase [Jonesia denitrificans DSM 20603]
 gi|256685778|gb|ACV08671.1| prolyl-tRNA synthetase [Jonesia denitrificans DSM 20603]
          Length = 594

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 42/192 (21%), Positives = 86/192 (44%), Gaps = 11/192 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E   HR L R     +I     G+  W   G ++   + + +R ++ +   + ++ P 
Sbjct: 19  DAEVASHRLLVRAG---YIRRAAPGIYSWLPLGLRVLDKVDAVVREEMERAGAQRVHFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++ +G W  Y  N+F ++   D       + L P +      +      SY++L
Sbjct: 76  LLPREPYEATGRWTEYGPNLFRLQDRKDG-----DYLLAPTHEEMFTLLVKDLYSSYKDL 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH-NLIISIYKD 417
           PV L +  + YR+E +    GL+R R F   DA+ F   E+   E  +   +    I++ 
Sbjct: 131 PVTLYQIQTKYRDE-ARPRAGLIRGREFIMKDAYSFDLTEEGLAESYRAQRDAYERIFRR 189

Query: 418 FGFEKIMVKLST 429
            G + ++V  ++
Sbjct: 190 LGLDYVIVAATS 201


>gi|227890230|ref|ZP_04008035.1| prolyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
 gi|227849232|gb|EEJ59318.1| prolyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
          Length = 565

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 73/150 (48%), Gaps = 16/150 (10%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHL-----WQQSGHW 311
           +I +  +GV  +   G+++ +         I+++ + IN P+++  HL     WQ+SG +
Sbjct: 31  YIRQVTAGVYAYLPLGYRVLRK----AENIIEEEMDNINVPEMIMPHLLPATLWQESGRY 86

Query: 312 DSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRN 371
             Y A MF ++      +  R   L P +      +    LKSY+++P+ L +  + +R+
Sbjct: 87  KKYGAEMFKLQD-----RHGRESLLGPTHEETFTEIVAKNLKSYKQMPLALYQIQTKFRD 141

Query: 372 EPSGSLHGLMRVRGFTQDDAHVF-CTKEQM 400
           E      GL+R R F   D + F  T+EQ+
Sbjct: 142 ENRPRF-GLLRGREFVMLDGYSFAATREQL 170


>gi|87121381|ref|ZP_01077270.1| prolyl-tRNA synthetase [Marinomonas sp. MED121]
 gi|86163224|gb|EAQ64500.1| prolyl-tRNA synthetase [Marinomonas sp. MED121]
          Length = 575

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 39/168 (23%), Positives = 74/168 (44%), Gaps = 8/168 (4%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK 322
           G+  W   G K+F+ + + +R ++ +    EI  P V  + LW++SG W  Y   +  +K
Sbjct: 38  GLYTWLPTGLKVFRKVENIVREEMQRAGALEIIMPGVQPKELWEESGRWQEYGPELLRIK 97

Query: 323 CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMR 382
              +     R + L P +      +  + + SY++LP+ L +  + +R+E      G+MR
Sbjct: 98  DRHE-----RDYCLGPTHEEVVTDLVRNEISSYKQLPLNLFQIQTKFRDEVRPRF-GVMR 151

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKI-HNLIISIYKDFGFEKIMVKLST 429
            R F   DA+ F +  +       + H     ++   G     V+  T
Sbjct: 152 SREFMMKDAYSFHSSPESLQTTYDVMHEAYCKVFDRVGLNYRPVRADT 199


>gi|328957405|ref|YP_004374791.1| proline--tRNA ligase [Carnobacterium sp. 17-4]
 gi|328673729|gb|AEB29775.1| proline--tRNA ligase [Carnobacterium sp. 17-4]
          Length = 568

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/160 (25%), Positives = 77/160 (48%), Gaps = 18/160 (11%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINT--- 296
           E+E   H+ L R     +I +  SGV  +     ++ + L + MR    +++E+IN    
Sbjct: 17  EAEVLSHKMLLRAG---YIRQISSGVYSYLPLATRVLEKLKNIMR----EEFEKINAVEM 69

Query: 297 --PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
             P +L + LW++SG +++Y  ++  ++      +  R + L P +      +    + S
Sbjct: 70  LMPSLLPRELWEESGRYETYGEDLMTLQD-----RHGRDYLLGPTHEEAFTTLIRDEITS 124

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           Y+ LP+ L +  + +R+E      GL+R R F   DA+ F
Sbjct: 125 YKRLPLSLYQIQTKFRDEKRPR-SGLLRGREFIMKDAYSF 163


>gi|288800296|ref|ZP_06405754.1| phosphoribulokinase family protein [Prevotella sp. oral taxon 299
           str. F0039]
 gi|288332509|gb|EFC70989.1| phosphoribulokinase family protein [Prevotella sp. oral taxon 299
           str. F0039]
          Length = 556

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/184 (21%), Positives = 84/184 (45%), Gaps = 2/184 (1%)

Query: 15  KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVI 73
           +N  + +T  D+   ++  +    ++  +N KV  +   V R   +E +    P  +   
Sbjct: 18  ENVTIGSTLFDIFPKLNLKMIHGPLSAKVNNKVEGMHYRVYRNKDVEFLDITSPSGMRAY 77

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
             +   ++ +AV  ++   +V +   + +G+Y D    +P  S++  +I+++MQEII   
Sbjct: 78  TRTLFFVLCKAVHDLYKGSKVVVEFPVSNGYYCDVQLGRPILSEDATKIKQRMQEIIDCK 137

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQ 193
            P  +     +    LF+ K +  KV++L+S     NV  Y   ++ D   G  + +T Q
Sbjct: 138 MPIRRFEQPTDDVIALFKKKGDEAKVKLLQSTGMLYNV-YYAIDDYVDYYYGSLLTNTAQ 196

Query: 194 VKKF 197
           +  F
Sbjct: 197 LYLF 200


>gi|257456039|ref|ZP_05621244.1| phosphoribulokinase family protein [Treponema vincentii ATCC 35580]
 gi|257446562|gb|EEV21600.1| phosphoribulokinase family protein [Treponema vincentii ATCC 35580]
          Length = 512

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 70/133 (52%), Gaps = 7/133 (5%)

Query: 72  VIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIA 131
           + R +   ++A A + ++P++++ +G      +YY F+     S  +L  IE KM EI+ 
Sbjct: 33  IYRRTLCFLLAAAARKVYPDLRLLVGHSFGYSYYYTFEGAHA-SEIDLKIIEDKMHEIVD 91

Query: 132 RDSPFLKQYLSHEKARELF--ESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
            D P   + +++ +A ELF   ++ +AY+   L S  +K  +T+    +++DL   P + 
Sbjct: 92  ADLPIHTKSVAYSEALELFANTNQPDAYR---LLSYNSKPKITINILDDYYDLYFQPLMD 148

Query: 190 STGQVKKFFKLMK 202
             G + K F LMK
Sbjct: 149 RAGYL-KVFGLMK 160


>gi|295706249|ref|YP_003599324.1| prolyl-tRNA synthetase [Bacillus megaterium DSM 319]
 gi|294803908|gb|ADF40974.1| prolyl-tRNA synthetase [Bacillus megaterium DSM 319]
          Length = 565

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 71/149 (47%), Gaps = 7/149 (4%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYR 315
           ++ ++ SGV  +   G ++ Q +   +R ++ +    E+  P +    LWQ+SG W SY 
Sbjct: 31  YMRQNSSGVYSFLPLGKRVLQKVEQIVREEMDRAGSVELLMPALQQAELWQESGRWYSYG 90

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
             +  +K      +  R FAL   +     ++    +KSY+ LP+ L +  + +R+E   
Sbjct: 91  PELMRMKD-----RHGREFALGATHEEVITSLLRDEVKSYKRLPLNLYQIQTKFRDEKRP 145

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
              GL+R R F   DA+ F   ++  +E 
Sbjct: 146 RF-GLLRGREFIMKDAYSFHASQESLDEV 173


>gi|257453020|ref|ZP_05618319.1| prolyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|257467420|ref|ZP_05631731.1| prolyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
          Length = 593

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 77/166 (46%), Gaps = 10/166 (6%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
           +E+E   H+ L R   +  +A   SG+  +   G++  + + + +R ++ +   +E+  P
Sbjct: 40  KEAEIISHQLLLRAGMIKKLA---SGLYTYLPLGFRTLKKVENIIREEMDRAGSQELLMP 96

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LWQ+SG W+     M  +K      +  R F L P N      +  + + SY+ 
Sbjct: 97  VLQPAELWQESGRWNVMGEEMVRLKD-----RHQRDFVLGPTNEEVITDIVRNDISSYKS 151

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE 403
           LP+ L    +  R+E      GLMR R F   DA+ F T ++  +E
Sbjct: 152 LPINLYHIQTKVRDERRPRF-GLMRSREFIMKDAYSFHTSQESLDE 196



 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 35/157 (22%), Positives = 67/157 (42%), Gaps = 27/157 (17%)

Query: 488 GRDWQCGTIQVDFNLPSRFN----AFYVNSHSEK------CHPVMIHRAVFGSIERFIGI 537
            R  +CG I   F L  +++    A Y++   E       C+ + + R +  +IE     
Sbjct: 428 ARGIECGHI---FKLGDKYSKALGASYLDEKGESKIMLMGCYGIGVGRTMAAAIE----- 479

Query: 538 MIENFKGNLPLWLSPIQAIVTTI------TSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
             +N+  +  +W S +   +  +       +  ++ A++I   L + HL    D R+E  
Sbjct: 480 --QNYDEHGIIWPSALAPYLVDVIPANIKNAEQMQLAEKIYEQLNAEHLDAMLDDRDERP 537

Query: 592 NYKIREHSIKKIPIIIICGDKEASE-RSIGIRRFGST 627
            +K ++  +   P  +ICG K A     + IR+ G T
Sbjct: 538 GFKFKDADLIGFPFKVICGKKAAENIVELKIRKTGET 574


>gi|148259950|ref|YP_001234077.1| prolyl-tRNA synthetase [Acidiphilium cryptum JF-5]
 gi|326403096|ref|YP_004283177.1| prolyl-tRNA synthetase [Acidiphilium multivorum AIU301]
 gi|166980092|sp|A5FX26|SYP_ACICJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|146401631|gb|ABQ30158.1| prolyl-tRNA synthetase [Acidiphilium cryptum JF-5]
 gi|325049957|dbj|BAJ80295.1| prolyl-tRNA synthetase [Acidiphilium multivorum AIU301]
          Length = 437

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 39/176 (22%), Positives = 74/176 (42%), Gaps = 8/176 (4%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  +G+  W   G ++   + + +R  + +   +EI  P +    LW++SG +D+Y  
Sbjct: 32  IRQQSAGIYAWLPAGLRVLHNIANIVREEQARAGSQEILMPTIQSAELWRESGRYDAYGP 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  ++   D     R     P N     A+    ++SYR+LP  L +    +R+E    
Sbjct: 92  EMLRIRDRHD-----REMLYGPTNEEMLTAIMRDSVQSYRDLPQMLYQIQWKFRDEVRPR 146

Query: 377 LHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP 431
             G++R R F   D + F    E       ++    +  +K  G   + ++  T P
Sbjct: 147 F-GVLRGREFYMKDGYSFDLDYEGAVESYRRMMLAYMRTFKRMGVRAVPMRADTGP 201


>gi|261879036|ref|ZP_06005463.1| phosphoribulokinase [Prevotella bergensis DSM 17361]
 gi|270334317|gb|EFA45103.1| phosphoribulokinase [Prevotella bergensis DSM 17361]
          Length = 553

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 41/188 (21%), Positives = 82/188 (43%), Gaps = 2/188 (1%)

Query: 11  DGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRS 69
           +G     PV  T S+    +  ++    +   +N KV  +   V     +E +       
Sbjct: 12  NGQSIKVPVGTTLSETFRHLDLNMKYGPICARVNNKVEGMHYRVYHNKDVEYLDMTSGSG 71

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
                 S   ++ +AV  ++    ++I   + +G+Y +    +P   +++  I K+MQEI
Sbjct: 72  SRNYTRSLFFVLCKAVHDLYSGTDLSIDIPVSNGYYVNLQIGRPIEQEDVDNIRKRMQEI 131

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
           I    P  + ++  E A  +FE K +  KV++L+SI      T Y+  ++ D   G  + 
Sbjct: 132 IDAKLPITRYHVPTEDAIRMFEEKGDEAKVKLLKSI-GTIYTTYYKIDDYVDYYYGSLLT 190

Query: 190 STGQVKKF 197
           +T ++  F
Sbjct: 191 NTSKLYLF 198


>gi|152996360|ref|YP_001341195.1| prolyl-tRNA synthetase [Marinomonas sp. MWYL1]
 gi|189083502|sp|A6VXT1|SYP_MARMS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|150837284|gb|ABR71260.1| prolyl-tRNA synthetase [Marinomonas sp. MWYL1]
          Length = 574

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/168 (23%), Positives = 73/168 (43%), Gaps = 8/168 (4%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK 322
           G+  W   G K+F+ + + +R ++ K    E+  P V    LWQ++G W  Y   +  ++
Sbjct: 38  GLYTWLPTGLKVFRKIENIVRDEMEKAGSLEVMMPGVQPAELWQETGRWQKYGPELLRLQ 97

Query: 323 CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMR 382
                 +  R + L P +      +  + L SY++LP+   +  + +R+E      G+MR
Sbjct: 98  -----DRHGREYCLGPTHEEVITELARNELTSYKQLPMNFFQIQTKFRDEVRPRF-GVMR 151

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKI-HNLIISIYKDFGFEKIMVKLST 429
            R F   DA+ F    +   E   I H    +++   G     V+  T
Sbjct: 152 SREFCMKDAYSFHVGAESLQETYDIMHKAYCNVFDRIGLNYRPVRADT 199


>gi|209964526|ref|YP_002297441.1| prolyl-tRNA synthetase [Rhodospirillum centenum SW]
 gi|209957992|gb|ACI98628.1| prolyl-tRNA synthetase ProS [Rhodospirillum centenum SW]
          Length = 404

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 61/138 (44%), Gaps = 7/138 (5%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  +G+  W   GW++ Q +   +R  + +   +E+  P +    LW+QSG +++Y  
Sbjct: 2   IRQTSAGIYAWLPLGWRVLQKVAQIVREEQDRAGAQEMLMPTIQSADLWKQSGRYEAYGK 61

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  +    D     R     P N      +F   +KSY++LP  L      +R+E    
Sbjct: 62  EMLRITDRHD-----REMLYGPTNEEMITDIFKTFVKSYKDLPKNLYHIQWKFRDEIRPR 116

Query: 377 LHGLMRVRGFTQDDAHVF 394
             GLMR R F   D + F
Sbjct: 117 F-GLMRGREFLMKDNYSF 133


>gi|159903050|ref|YP_001550394.1| prolyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
 gi|226701318|sp|A9BED0|SYP_PROM4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|159888226|gb|ABX08440.1| Prolyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
          Length = 600

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 64/141 (45%), Gaps = 10/141 (7%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRAN---M 318
           SG+  +    W++ Q +   +R ++      E   PQ+    LW+++G W+ Y A    M
Sbjct: 37  SGIYAYLPLMWRVIQKINCIIREELNAKGCLEALLPQLHPSDLWKKTGRWEGYTAGEGIM 96

Query: 319 FAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLH 378
           F +K      +  R   L P +      +    L SY++LPV L +  + +R+E      
Sbjct: 97  FNLKD-----RQGRELGLGPTHEEIITQIAGESLHSYKQLPVNLYQIQTKFRDEIRPRF- 150

Query: 379 GLMRVRGFTQDDAHVFCTKEQ 399
           GLMR R F   DA+ F   E+
Sbjct: 151 GLMRSREFIMKDAYSFHANEE 171


>gi|312962836|ref|ZP_07777323.1| prolyl-tRNA synthetase [Pseudomonas fluorescens WH6]
 gi|311282863|gb|EFQ61457.1| prolyl-tRNA synthetase [Pseudomonas fluorescens WH6]
          Length = 571

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 44/194 (22%), Positives = 83/194 (42%), Gaps = 10/194 (5%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           +QYL   ++    D   ++ ++ L    I +  SG+  W   G K+ + + + +R ++  
Sbjct: 4   SQYLLATQKETPSDAVVISHQLMLRAGMIRKLASGLYTWLPMGLKVMRKVEAIVREEMNA 63

Query: 290 DYE-EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
               E+  P      LWQ+SG W+ Y   +   K      +  R F   P +      + 
Sbjct: 64  AGSLEVLMPSTQPAELWQESGRWEEYGPELLRFKD-----RHGRDFCAGPTHEEVITDLM 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KI 407
            + L SY++LP+ L +  + +R+E      GLMR R F   DA+ F   +        ++
Sbjct: 119 RNELSSYKQLPLNLYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSFHADQASLQVTYDRM 177

Query: 408 HNLIISIYKDFGFE 421
           H    +++   G +
Sbjct: 178 HQAYCNVFTRLGLK 191


>gi|329120957|ref|ZP_08249588.1| proline--tRNA ligase [Dialister micraerophilus DSM 19965]
 gi|327471119|gb|EGF16573.1| proline--tRNA ligase [Dialister micraerophilus DSM 19965]
          Length = 574

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 6/101 (5%)

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            +WQQ+G WD Y   MF +K   +     R + L P +      + +    SY++LPV L
Sbjct: 78  EIWQQTGRWDVYGEEMFRLKDRHE-----RDYCLAPTHEELVTTLVHIDTFSYKQLPVSL 132

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE 403
            +  + YR+E      GLMR R F   DA+ F   E+  ++
Sbjct: 133 YQIQNKYRDEKRPRF-GLMRSREFIMKDAYTFDVDEEGLDK 172


>gi|261855252|ref|YP_003262535.1| prolyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
 gi|261835721|gb|ACX95488.1| prolyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
          Length = 568

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 71/156 (45%), Gaps = 10/156 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E   H+ + R   +  +A   SG+  W   G ++ + + + +R +++     E+  P 
Sbjct: 17  EAEIISHQLMLRAGMIRRLA---SGLYTWSPLGLRVLRKVEAVVREEMEGIGALELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W  Y   +  VK   D     R F + P +           LKSYR+L
Sbjct: 74  IQPAELWQESGRWQKYGPELLRVKDRHD-----REFCVGPTHEEVISDYARRELKSYRQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           P+   +  + +R+E      G+MR R F   DA+ F
Sbjct: 129 PICYYQVQTKFRDEIRPRF-GVMRAREFIMKDAYSF 163


>gi|77457424|ref|YP_346929.1| prolyl-tRNA synthetase [Pseudomonas fluorescens Pf0-1]
 gi|114152233|sp|Q3KH16|SYP_PSEPF RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|77381427|gb|ABA72940.1| proline tRNA synthetase [Pseudomonas fluorescens Pf0-1]
          Length = 571

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 37/162 (22%), Positives = 71/162 (43%), Gaps = 8/162 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++      E+  P      LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYTWLPMGLRVMRKVEAIVREEMDAAGSLEVLMPSTQPAELWQESGRWEEYGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +K      +  R F   P +      +  + L SY++LP+ L +  + +R+E      GL
Sbjct: 96  IKD-----RHGRDFCAGPTHEEVITDLMRNELSSYKQLPINLYQIQTKFRDEIRPRF-GL 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFE 421
           MR R F   D++ F   +        ++H+   +I+   G +
Sbjct: 150 MRGREFIMKDSYSFHADQASLQVTYDRMHDAYCNIFTRLGLK 191


>gi|313896347|ref|ZP_07829900.1| proline--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430]
 gi|312975146|gb|EFR40608.1| proline--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430]
          Length = 570

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 45/183 (24%), Positives = 79/183 (43%), Gaps = 11/183 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+E   HR + R      I +   G+  +    W+  + +   +R ++     +EI  P 
Sbjct: 17  EAEIASHRLMYR---AGLIRKSAGGMYTYLPLAWRTLRKIEQIIREEMDAAGGQEIMMPI 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW++SG W +Y A M  ++      +  R F L P +     A+    L+SY++L
Sbjct: 74  LQPAELWEESGRWGAYGAEMMRIQ-----DRHERAFCLGPTHEEMITALVRDELRSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKD 417
           PV L +    +R+E      G+MR R F   D + F    E M     K++    +++  
Sbjct: 129 PVMLYQIQDKFRDERRPRF-GVMRSREFIMQDLYSFDKDVEGMHESYRKMYEAYTNVFTR 187

Query: 418 FGF 420
            G 
Sbjct: 188 CGL 190


>gi|90417103|ref|ZP_01225031.1| prolyl-tRNA synthetase [marine gamma proteobacterium HTCC2207]
 gi|90331119|gb|EAS46375.1| prolyl-tRNA synthetase [marine gamma proteobacterium HTCC2207]
          Length = 574

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/166 (24%), Positives = 77/166 (46%), Gaps = 9/166 (5%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-K 288
           +QYL   ++    D   ++ ++ L    I +  SG+  W   G ++F+ + + +R+++ +
Sbjct: 4   SQYLISTKKESPADAEVISHQLMLRAGMIRKVASGLYSWLPLGLRVFRKVEAIVRQEMDR 63

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
               EI  P V    LW +SG W  +   +  +K      +  R F L P +      + 
Sbjct: 64  SGALEIMMPVVQPADLWTESGRWGQFGPELLRIKD-----RHGREFCLGPTHEEVVTDII 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
            + ++SY++LP    +  + +R+E      G+MR R F   DA+ F
Sbjct: 119 RNEIRSYKQLPANFYQIQTKFRDERRPRF-GVMRTREFCMKDAYSF 163


>gi|302542146|ref|ZP_07294488.1| proline-tRNA ligase [Streptomyces hygroscopicus ATCC 53653]
 gi|302459764|gb|EFL22857.1| proline-tRNA ligase [Streptomyces himastatinicus ATCC 53653]
          Length = 569

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 88/194 (45%), Gaps = 22/194 (11%)

Query: 224 AWNTQQELTQYLYFLEE----SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTL 279
           A + Q+  T  L  L E    +E   H+ L R     ++    +G+  W   G K+ + +
Sbjct: 4   AAHVQRMSTLMLKTLREDPADAETASHKLLVRA---GYVRRASAGIWTWLPVGKKVLENV 60

Query: 280 ISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKP 338
              +R ++     +E+  P +L +  ++ SG W+ Y   +F +K  D    D        
Sbjct: 61  SRIVREEMDAIGAQEVLLPALLPKEPYEASGRWEEYGDLLFRLK--DRKGGDY------- 111

Query: 339 MNCPGHVAVFNHGLK----SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           +  P H  +F   +K    SY++LPV L +  + YR+E +    G++R R F   D++ F
Sbjct: 112 LLGPTHEEIFTQTVKDQCTSYKDLPVMLYQIQTKYRDE-ARPRSGVLRGREFQMKDSYSF 170

Query: 395 CTKEQMFNECLKIH 408
            T ++   E  ++H
Sbjct: 171 DTSDEGLAESYRLH 184


>gi|228956855|ref|ZP_04118640.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228802896|gb|EEM49729.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis serovar pakistani
           str. T13001]
          Length = 502

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 93/448 (20%), Positives = 173/448 (38%), Gaps = 62/448 (13%)

Query: 212 SNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRK 271
             R  L  + G      +E  Q +  +EE   + +  + ++ +L   +    G +     
Sbjct: 12  GTRAFLYFLEGGRLTMAKEQVQAITKMEEDFAQWYTDIVKKAELVDYS-SVKGCMILRPY 70

Query: 272 GWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIK 329
           G+ +++ +   M  K+K+ D+E +  P  + + L Q +  H + +   +  V    D  K
Sbjct: 71  GYALWENMQKVMDEKLKETDHENVYMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGDE-K 129

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
                 ++P +       F+  ++SY +LP    ++ SV R E +      +R   F   
Sbjct: 130 LAERLCVRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKT--TRPFLRTTEFLWQ 187

Query: 390 DAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIM 448
           + H +  T E+   E L I NL  S  +D+    ++    T  EK  G+ A +       
Sbjct: 188 EGHTIHETAEESQAETLNILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKATY------- 240

Query: 449 KGVLDTIKNSSQD--RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF 506
                TI++   D   + TG     G  +   F+    D  G+ WQ              
Sbjct: 241 -----TIESLMHDGKALQTGTSHNFGTNFSEAFDIKFLDRNGK-WQ-------------- 280

Query: 507 NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTITS 562
                           +H+  +G   R IG +I     N    +P  ++P+Q ++  I  
Sbjct: 281 ---------------YVHQTSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQVVIVPIAQ 325

Query: 563 SAVEYAQEIANLLKSH---HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSI 619
              E     A  L++H      ++ D  N+T  +K  E+ +K IPI +  G K+  +  +
Sbjct: 326 HK-EGVLAKATELQAHIQKVARVKIDASNKTPGWKFNEYEMKGIPIRLEVGPKDIEKNQV 384

Query: 620 GIRRFGSTTTQKV---SLLDAIPILTKE 644
            + R  +   + V    L + IP L +E
Sbjct: 385 VLVRRDTKEKEFVPMDQLEERIPALLEE 412


>gi|322434762|ref|YP_004216974.1| prolyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9]
 gi|321162489|gb|ADW68194.1| prolyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9]
          Length = 612

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 43/195 (22%), Positives = 87/195 (44%), Gaps = 24/195 (12%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQV 299
           ++E   H+ L R     ++ + G+G+  +   G +    +++ +R+++    +E   P +
Sbjct: 18  DAEVASHKLLLRA---GYVRQLGAGIYSYLFLGQRSVNKIVAIIRQEMDTIGQEFLLPTI 74

Query: 300 LDQHLWQQSGHWDSYRANMFAVK-------CADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
             + +W++SG W     NMF +K       C   T +++ T             +    L
Sbjct: 75  HPREVWEESGRWTGMGDNMFRLKDRKGAELCLGMTHEEVMT------------TIARSEL 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
           +SY++LP    +  + +R+EP     GL+RVR F   D++ F   E   +    +H+   
Sbjct: 123 RSYKQLPQIWYQIQTKFRDEPRPK-SGLLRVRQFIMKDSYSFDIDEAGLDLSYNLHDAAY 181

Query: 413 -SIYKDFGFEKIMVK 426
             I+   G E + V+
Sbjct: 182 RRIFDRCGLEYVAVE 196


>gi|254521784|ref|ZP_05133839.1| prolyl-tRNA synthetase [Stenotrophomonas sp. SKA14]
 gi|219719375|gb|EED37900.1| prolyl-tRNA synthetase [Stenotrophomonas sp. SKA14]
          Length = 567

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 47/206 (22%), Positives = 86/206 (41%), Gaps = 22/206 (10%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E   HR + R   +  +A   SG+  W   G ++ + +   +R ++ +    E   P 
Sbjct: 17  DAELTSHRLMLRAGMIRKLA---SGLYTWSPLGLRVLRKVERIVREEMDRAGAVEFQIPT 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +  + LW+Q+G W  +   +  +K   D +     F   P             L SY++L
Sbjct: 74  IQPKELWEQTGRWQKFGPQLLKIKDRKDQV-----FCYSPTAEEAACDFARSELSSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-----KIHNLIIS 413
           PV   +  + +R+E      G+MR R F   DA+ F     + +ECL      + +    
Sbjct: 129 PVNFYQVQTKFRDEIRPRF-GVMRSREFLMKDAYSF----HLHDECLVREYENMKSAYSR 183

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDA 439
           I+   G +  MV+  +     +G DA
Sbjct: 184 IFTRLGLDFRMVQADSGA---IGGDA 206


>gi|167039496|ref|YP_001662481.1| prolyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|300915254|ref|ZP_07132569.1| prolyl-tRNA synthetase [Thermoanaerobacter sp. X561]
 gi|307725178|ref|YP_003904929.1| prolyl-tRNA synthetase [Thermoanaerobacter sp. X513]
 gi|226701350|sp|B0K5F2|SYP_THEPX RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|166853736|gb|ABY92145.1| prolyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|300888978|gb|EFK84125.1| prolyl-tRNA synthetase [Thermoanaerobacter sp. X561]
 gi|307582239|gb|ADN55638.1| prolyl-tRNA synthetase [Thermoanaerobacter sp. X513]
          Length = 570

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 66/134 (49%), Gaps = 7/134 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SGV  +   G ++ + +   +R ++ +   +E+    ++   L ++SG WD +   MF 
Sbjct: 36  ASGVYIYLPLGQRVLRKVEQIVREEMDRAGSQEVLMSALIPAELLKESGRWDVFGPEMFK 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +K  ++     R F L P +      +  + +KSYR+LP+ L +  + +R+E      G+
Sbjct: 96  LKDRNE-----RDFCLGPTHEEVFTDLIRNEVKSYRQLPLILYQIQTKFRDERRPRF-GV 149

Query: 381 MRVRGFTQDDAHVF 394
           MR R F   DA+ F
Sbjct: 150 MRSREFIMKDAYSF 163


>gi|329569947|gb|EGG51702.1| proline--tRNA ligase [Enterococcus faecalis TX1467]
          Length = 516

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 64/135 (47%), Gaps = 7/135 (5%)

Query: 288 KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
           K D  E+  P +L   LW++SG +++Y  N++ +K  +D     R + L P +      +
Sbjct: 7   KIDAVEMLMPALLPAELWKESGRYETYGPNLYRLKDRND-----RDYILGPTHEETFTEL 61

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
               + SY+ LP+ L +  + YR+E      GL+R R F   D + F   E   ++  + 
Sbjct: 62  IRDEINSYKRLPLNLYQIQTKYRDEKR-PRSGLLRGREFIMKDGYSFHADEASLDQSYRD 120

Query: 408 HNLIIS-IYKDFGFE 421
           +    S I++  G E
Sbjct: 121 YEKAYSRIFERCGLE 135


>gi|269137906|ref|YP_003294606.1| prolyl-tRNA synthetase [Edwardsiella tarda EIB202]
 gi|267983566|gb|ACY83395.1| prolyl-tRNA synthetase [Edwardsiella tarda EIB202]
 gi|304557958|gb|ADM40622.1| Prolyl-tRNA synthetase [Edwardsiella tarda FL6-60]
          Length = 572

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 65/146 (44%), Gaps = 11/146 (7%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE---EINTPQVLDQHLWQQSGHWDSYRANM 318
            SG+  W   G ++   + + +R ++  +Y    E++ P V    LWQ+SG W+ Y   +
Sbjct: 36  ASGLYTWLPTGLRVLNKVENIVREEM--NYAGAIEVSMPVVQPADLWQESGRWEQYGPEL 93

Query: 319 FAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLH 378
                  D     R F L P +      +  + + SY++LP+   +  + +R+E      
Sbjct: 94  LRFVDRGD-----RPFVLGPTHEEVITDLVRNEISSYKQLPLNFYQIQTKFRDEVRPRF- 147

Query: 379 GLMRVRGFTQDDAHVFCTKEQMFNEC 404
           G+MR R F   DA+ F T +    E 
Sbjct: 148 GVMRSREFLMKDAYSFHTTQASLQET 173


>gi|119899055|ref|YP_934268.1| prolyl-tRNA synthetase [Azoarcus sp. BH72]
 gi|152074747|sp|A1K976|SYP_AZOSB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|119671468|emb|CAL95381.1| unnamed protein product [Azoarcus sp. BH72]
          Length = 581

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 48/102 (47%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P V    LWQ++G WD     M   K      +  R FAL+P +      +    L
Sbjct: 68  ELTMPLVQPSELWQETGRWDKMGPEMLRFKD-----RHERDFALQPTSEEVVTDIARQEL 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSYR+LP    +  + +R+E      G+MR R FT  DA+ F
Sbjct: 123 KSYRQLPKNFYQIQTKFRDERRPRF-GVMRGREFTMKDAYSF 163


>gi|116195310|ref|XP_001223467.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
 gi|88180166|gb|EAQ87634.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
          Length = 556

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 83/369 (22%), Positives = 149/369 (40%), Gaps = 61/369 (16%)

Query: 275 IFQTLISYMRRKIKD-DYEEINTPQVLDQH-LWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           ++ T+  + + +I++   EE N P  L Q  L ++  H + +   +  V  A D  KDL 
Sbjct: 90  VWNTIRKWFQERIEEMGVEETNFPMFLSQKSLEKEKDHVEGFAPELAWVTKAGD--KDLE 147

Query: 333 T-FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
              A++P +       ++  ++S+R+LP RL ++ SV R E   +    +R R F   + 
Sbjct: 148 VPVAVRPTSEAVMYPYYSKWIRSHRDLPFRLNQWNSVVRWEAKQTTP-FLRAREFLWQEG 206

Query: 392 HVFCTKEQMFN-ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKG 450
           H     EQ+   E L+I  L   IY+      ++    T  EK                 
Sbjct: 207 HTAHLTEQLAGEEVLQILELYAGIYEQLLAVPVVRGRKTEAEKFA--------------- 251

Query: 451 VLDTIKNSSQDRINTGVLLGEGAFYGPKFE-YILKDAIGRDWQCGTIQVDFNLPSRFNAF 509
                                G +Y    E YI  +  GR  Q  T        S+    
Sbjct: 252 ---------------------GGYYTTTVEGYIPSN--GRGIQGATSHCLGQNFSKMFDI 288

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMI---ENFKG-NLPLWLSPIQAIVTTITSSA- 564
            V   +EK   + + +  +G   R IG+M+    + KG  LP  ++ IQ+I+  +  +A 
Sbjct: 289 TVEDPNEKGKHINVWQNSWGLSTRVIGVMVMIHGDDKGLVLPPRIAKIQSILIPVGLTAK 348

Query: 565 ---------VEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEA 614
                    +++  EI   +K+  +  E D R+  T  +K  +  +K +P+ +  G K+A
Sbjct: 349 MTAEEKEKHLKHLDEIFFTIKNAGIRTEVDLRDGYTPAWKFNDWELKGVPLRLEFGPKDA 408

Query: 615 SERSIGIRR 623
           ++  +   R
Sbjct: 409 AKEVVSYAR 417


>gi|225412274|ref|ZP_03761463.1| hypothetical protein CLOSTASPAR_05496 [Clostridium asparagiforme
           DSM 15981]
 gi|225042192|gb|EEG52438.1| hypothetical protein CLOSTASPAR_05496 [Clostridium asparagiforme
           DSM 15981]
          Length = 555

 Score = 54.7 bits (130), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 44/187 (23%), Positives = 86/187 (45%), Gaps = 4/187 (2%)

Query: 14  IKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVI 73
           ++ +P   T  +VA           + V +NGK+ +L   VR+ S+  IT  D   ++  
Sbjct: 15  VREYPEGTTWLEVAGEYQHFYENDILLVRVNGKLQELHKHVRDCSLTFITARDKPGMSAY 74

Query: 74  RHSCAHIMAEAVQSIWPE---VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEII 130
           + S + +M +A   +       +V++   I  GF+ +   +   + + L Q+++KM+E +
Sbjct: 75  QRSASLLMLKAFYDVVGAERVRKVSVDFSIGKGFFVEPSGDFELTPELLNQVKEKMREYV 134

Query: 131 ARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRS 190
               P +K+ +  + A ELF  +   Y    L +      V +Y  G + D   G  V++
Sbjct: 135 EEAIPIMKRSVHTDDAVELFH-RHGMYDKARLFNYRRVSRVNIYSIGGFEDYYYGYMVQN 193

Query: 191 TGQVKKF 197
           TG ++ F
Sbjct: 194 TGYIRYF 200


>gi|114769540|ref|ZP_01447166.1| prolyl-tRNA synthetase [alpha proteobacterium HTCC2255]
 gi|114550457|gb|EAU53338.1| prolyl-tRNA synthetase [alpha proteobacterium HTCC2255]
          Length = 446

 Score = 54.7 bits (130), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 41/176 (23%), Positives = 77/176 (43%), Gaps = 8/176 (4%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  SG+  W   G+K+ + L + +   +I+  +  +  P +    LW++SG +D Y  
Sbjct: 32  IRQAQSGIYSWLPMGYKVLRKLENIVHDEQIRAGHNPMLMPTIQSADLWRESGRYDDYGK 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  +     T +  R     P N      +F + +KSY++LP+ L      +R+E    
Sbjct: 92  EMLRI-----TDRHGRDMLFGPTNEELITDIFRNSVKSYKDLPMTLYHIQWKFRDEVRPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL-IISIYKDFGFEKIMVKLSTRP 431
             G+MR R F   D + F   ++        H +  +  Y+  G + I ++  + P
Sbjct: 147 F-GVMRGREFLMKDGYNFDLNKEAAMHSYNRHMVSYLRTYERMGMKAIPMRADSGP 201


>gi|329889349|ref|ZP_08267692.1| prolyl-tRNA synthetase [Brevundimonas diminuta ATCC 11568]
 gi|328844650|gb|EGF94214.1| prolyl-tRNA synthetase [Brevundimonas diminuta ATCC 11568]
          Length = 438

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 89/417 (21%), Positives = 171/417 (41%), Gaps = 41/417 (9%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I ++ +G+  W   G ++ + +   +R  ++K    E+  P +    LW++SG +D+Y  
Sbjct: 32  IKQEAAGIYAWLPLGLRVLRKIEGIVRDEQVKAGAVELLMPTLQLADLWRESGRYDAYGP 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  +     T +  R     P N      +F   +KSY+ LP+ L      +R+E    
Sbjct: 92  EMLRI-----TDRHERELLYGPTNEEMVTDIFRAYVKSYKALPLNLFHIQWKFRDERRPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
             G+MR R F   DA+ F   E       K +    ++ +   G + + ++  T P   +
Sbjct: 147 F-GVMRGREFLMKDAYSFDLDEASARIAYKRMFAAYLNTFARLGLKAVPMRADTGP---I 202

Query: 436 GSD------ALWDDAENIM---KGVLDTIK---NSSQDRINTGVLLGEGAFYGPKFE--- 480
           G D       L +  E+ +   + +++      N S +++  GV     A Y    E   
Sbjct: 203 GGDLSHEFIVLAETGESEVFCDRKLVEMAAPGHNLSVEQLE-GVFNERTALYAATEEMHD 261

Query: 481 ---YILKDAIGRDWQCGTIQVD--FNLPSRFN-AFYVNSHSEKCHPVMIHRAVFG-SIER 533
              +  + A G       I+V   F   ++++ A              +H   +G  + R
Sbjct: 262 AAQFETQTAEGDRLSARGIEVGHIFYFGTKYSAAMKAKVAGPNGQDTEVHMGSYGVGVSR 321

Query: 534 FIGIMIE--NFKGNL--PLWLSPIQAIVTTITSS--AVEYAQEIA-NLLKSHHLSIETDF 586
            +G +IE  + +G +  P  ++P   +V  + +S  AV  A E A   L++    +  D 
Sbjct: 322 LLGAIIEASHDEGGIIWPDSVAPFDVVVINLRASDEAVSAACEDAVAKLEALGKDVLYDD 381

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +E    K     +  +P  +  G K  ++  + ++R  +   Q +SL  A+ +LTK
Sbjct: 382 TDERPGGKFATADLIGVPWQLTIGPKGLADGVVELKRRATGEKQSLSLDAALELLTK 438


>gi|239944683|ref|ZP_04696620.1| prolyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
 gi|239991146|ref|ZP_04711810.1| prolyl-tRNA synthetase [Streptomyces roseosporus NRRL 11379]
 gi|291448145|ref|ZP_06587535.1| prolyl-tRNA synthetase 1 [Streptomyces roseosporus NRRL 15998]
 gi|291351092|gb|EFE77996.1| prolyl-tRNA synthetase 1 [Streptomyces roseosporus NRRL 15998]
          Length = 567

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 45/192 (23%), Positives = 88/192 (45%), Gaps = 19/192 (9%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R     ++  + +G+  W   G K+   + + +R ++     +E+  P 
Sbjct: 21  DAETLSHKLLVRA---GYVRRNAAGIWTWLPLGKKVLDNISNVVREEMDAIGAQEVLLPA 77

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L +  ++ SG W+ Y   +F +K  D    D        +  P H  +F   +K    S
Sbjct: 78  LLPKEPYEASGRWEEYGDLLFRLK--DRKGGDY-------LLGPTHEEIFTQTVKDQCTS 128

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI-IS 413
           Y++LPV L +  + YR+E +    G++R R F   D++ F T ++       +H    I 
Sbjct: 129 YKDLPVMLYQIQTKYRDE-ARPRSGVLRGREFQMKDSYSFDTTDEGLAHSYALHRAAYIK 187

Query: 414 IYKDFGFEKIMV 425
           I++  G +  +V
Sbjct: 188 IFERLGLDHRIV 199


>gi|89898569|ref|YP_515679.1| prolyl-tRNA synthetase [Chlamydophila felis Fe/C-56]
 gi|114152181|sp|Q253K4|SYP_CHLFF RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|89331941|dbj|BAE81534.1| prolyl tRNA synthetase [Chlamydophila felis Fe/C-56]
          Length = 577

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 39/175 (22%), Positives = 78/175 (44%), Gaps = 7/175 (4%)

Query: 232 TQYLYFLEESEKRDHRKLAREM--DLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           +Q  Y   ++  +D   L+ E+     +I +   GV  +    W++   ++  +R ++  
Sbjct: 4   SQLFYKTSKNANKDAAVLSYELLEKAGYIFKTAKGVYTYTPLFWRVALKMMDIVREELNA 63

Query: 290 -DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
              +E+  P +    LWQ++G W+++R+        D   K+L    L P +        
Sbjct: 64  IGGQELMLPILHPAELWQKTGRWEAFRSEGLLYTLTDREDKEL---CLAPTHEEVVTMFV 120

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE 403
           +  L   ++LP+ L +  + +R+E      GLMR R F  +D++ F    +  NE
Sbjct: 121 SQWLSGRKQLPIHLYQIATKFRDEIRPRF-GLMRAREFLMEDSYTFSDSPEQMNE 174


>gi|258516305|ref|YP_003192527.1| phosphoribulokinase/uridine kinase [Desulfotomaculum acetoxidans
           DSM 771]
 gi|257780010|gb|ACV63904.1| phosphoribulokinase/uridine kinase [Desulfotomaculum acetoxidans
           DSM 771]
          Length = 552

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 44/176 (25%), Positives = 80/176 (45%), Gaps = 7/176 (3%)

Query: 28  ESISRSLAKKAVAV----AINGKVCDLSDPVRE-GSIEIITPEDPRSLAVIRHSCAHIMA 82
           E ISR+     +       +N ++ DL+  V E   I  +           + S + +  
Sbjct: 22  EEISRNFGNSPIGTIVLGTVNSELKDLTYKVEEDAEISFLDLTTTNGQKAYKRSLSFLFI 81

Query: 83  EAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLS 142
           +A   I+ E +V +   +  G Y         +   +A+I+ +M E++ +D PF+K+ L 
Sbjct: 82  KATNDIFEEARVELCHTLSRGQYCKIINYPAINEQFVAKIKARMHELVQQDIPFVKEKLP 141

Query: 143 HEKARELF-ESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
            E A +LF E      K+ + ++I  K N++LY   ++ D   G  V STG ++ F
Sbjct: 142 LEYAIKLFQEETNRQEKITLFKNI-NKRNISLYSLDDYKDYFHGFLVPSTGYLRLF 196


>gi|256752497|ref|ZP_05493354.1| prolyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
 gi|256748632|gb|EEU61679.1| prolyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
          Length = 570

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 66/134 (49%), Gaps = 7/134 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SGV  +   G ++ + +   +R ++ +   +E+    ++   L ++SG WD +   MF 
Sbjct: 36  ASGVYIYLPLGQRVLRKVEQIVREEMDRAGSQEVLMSALIPAELLKESGRWDVFGPEMFK 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +K  ++     R F L P +      +  + +KSYR+LP+ L +  + +R+E      G+
Sbjct: 96  LKDRNE-----RDFCLGPTHEEVFTDLIRNEVKSYRQLPLILYQIQTKFRDERRPRF-GV 149

Query: 381 MRVRGFTQDDAHVF 394
           MR R F   DA+ F
Sbjct: 150 MRSREFIMKDAYSF 163


>gi|218282600|ref|ZP_03488838.1| hypothetical protein EUBIFOR_01424 [Eubacterium biforme DSM 3989]
 gi|218216471|gb|EEC90009.1| hypothetical protein EUBIFOR_01424 [Eubacterium biforme DSM 3989]
          Length = 564

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 50/225 (22%), Positives = 106/225 (47%), Gaps = 25/225 (11%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           +G+      G K+   + + +R ++   D +E+  P ++ + ++ QSG  +++ +NMF++
Sbjct: 37  NGIYMIMPMGKKVLSKVENIIREEMDAKDAQELLMPALIPEDVYVQSGRREAFGSNMFSL 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
                + +  + + L P +        +   KSY++ P  L +  + YR+E +   +GL+
Sbjct: 97  -----SDRYNKRYVLGPTHEELFAVASSMDGKSYKDFPYNLYQIQTKYRDE-TRPRYGLI 150

Query: 382 RVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD-- 438
           RVR F   DA+ F   E   +    K+++    I    G E  +VK  T     + S+  
Sbjct: 151 RVREFIMKDAYTFDVDEAGLDVAYNKMYDAYCRIMDRLGLEYKIVKADTGAMGGLLSEEY 210

Query: 439 -ALWDDAENIMKG--------------VLDTIKNSSQDRINTGVL 468
            AL    E+++ G              V+DT+++S+++ ++  V+
Sbjct: 211 QALSSIGEDVVVGCVGCDYSSNLEITEVVDTMQDSTEEELSMEVV 255


>gi|150396141|ref|YP_001326608.1| prolyl-tRNA synthetase [Sinorhizobium medicae WSM419]
 gi|166980159|sp|A6U7Z3|SYP_SINMW RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|150027656|gb|ABR59773.1| prolyl-tRNA synthetase [Sinorhizobium medicae WSM419]
          Length = 442

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 68/157 (43%), Gaps = 10/157 (6%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTP 297
           +E+E   HR + R      I +  +G+  W   G ++   + + +R  + +    E+  P
Sbjct: 16  KEAEIVSHRLMLRTG---MIRQQSAGIYTWLPLGKRVLDKVNAVIREEQNRSGAIELLMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LWQ+SG +D+Y   M  +K   D     R     P N      +F   +KSYR 
Sbjct: 73  TLQSAELWQESGRYDAYGKEMLRIKDRQD-----RPMLYGPTNEEMITDIFRSYVKSYRN 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           LP+ L      +R+E      G MR R F   DA+ F
Sbjct: 128 LPLNLYHIQLKFRDEIRPRF-GTMRSREFLMKDAYSF 163


>gi|149198845|ref|ZP_01875887.1| prolyl-tRNA synthetase [Lentisphaera araneosa HTCC2155]
 gi|149138043|gb|EDM26454.1| prolyl-tRNA synthetase [Lentisphaera araneosa HTCC2155]
          Length = 577

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 66/132 (50%), Gaps = 7/132 (5%)

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
           D +EI  P V    +WQ+SG +DS   ++   K  D   KD+   A+       H+A   
Sbjct: 65  DCQEIMMPVVNPAEIWQESGRYDSVDQSLLRFK--DRNQKDM-VLAMTHEEAVCHMA--R 119

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIH 408
             + SY++LP  + +  + YR+E + +  GL+RVR FT  DA+ F   E+  ++   ++H
Sbjct: 120 TEITSYKQLPASVYQIQTKYRDE-ARARAGLIRVREFTMKDAYSFHDSEKCLSDYYDRVH 178

Query: 409 NLIISIYKDFGF 420
                I++  G 
Sbjct: 179 QAYERIFERVGL 190


>gi|307266366|ref|ZP_07547904.1| prolyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306918602|gb|EFN48838.1| prolyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 570

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 66/134 (49%), Gaps = 7/134 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SGV  +   G ++ + +   +R ++ +   +E+    ++   L ++SG WD +   MF 
Sbjct: 36  ASGVYIYLPLGQRVLRKVEQIVREEMDRAGSQEVLMSALIPAELLKESGRWDVFGPEMFK 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +K  ++     R F L P +      +  + +KSYR+LP+ L +  + +R+E      G+
Sbjct: 96  LKDRNE-----RDFCLGPTHEEVFTDLIRNEVKSYRQLPLILYQIQTKFRDERRPRF-GV 149

Query: 381 MRVRGFTQDDAHVF 394
           MR R F   DA+ F
Sbjct: 150 MRSREFIMKDAYSF 163


>gi|326333619|ref|ZP_08199856.1| proline--tRNA ligase [Nocardioidaceae bacterium Broad-1]
 gi|325948525|gb|EGD40628.1| proline--tRNA ligase [Nocardioidaceae bacterium Broad-1]
          Length = 582

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 39/192 (20%), Positives = 86/192 (44%), Gaps = 11/192 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R     +I     G+  W   G ++   +   +R ++     +E++ P 
Sbjct: 15  DAEVASHKLLVRAG---YIRRAAPGIYSWLPLGLRVLGKVEQIIREEMASIGSQEVHFPA 71

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++ +G W  Y   +F +K   +       + L P +      +      SY++L
Sbjct: 72  LLPREPYEATGRWTEYGDGIFRLKDRKEA-----DYLLGPTHEEMFTLLVKDLYGSYKDL 126

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH-NLIISIYKD 417
           P+ + +  + YR+E +    GL+R R F   D++ F   ++      + H +  + ++  
Sbjct: 127 PLSIYQIQTKYRDE-ARPRAGLLRGREFIMKDSYSFDVTDEGLEAAYQAHRDAYVRVFDR 185

Query: 418 FGFEKIMVKLST 429
            GFE ++VK ++
Sbjct: 186 LGFEYVIVKATS 197


>gi|303258207|ref|ZP_07344214.1| proline--tRNA ligase [Burkholderiales bacterium 1_1_47]
 gi|302858960|gb|EFL82044.1| proline--tRNA ligase [Burkholderiales bacterium 1_1_47]
          Length = 582

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 14/132 (10%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P V    LWQ++G W  Y A +   K   D     R F L+P +      +    +
Sbjct: 68  ELLMPIVQPAELWQETGRWQKYGAELLRFKDRHD-----RDFVLQPTSEEVVTDIARQEI 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF--------CTKEQMFNEC 404
           KS+R+LPV   +  + +R+E      G+MR R F   DA+ F         + ++MF+  
Sbjct: 123 KSWRQLPVNFYQIQTKFRDERRPRF-GVMRGRDFVMKDAYSFDRTAEDAGKSYDKMFDAY 181

Query: 405 LKIHNLIISIYK 416
            +I + +  +Y+
Sbjct: 182 CRIFDRLGLVYR 193


>gi|167036776|ref|YP_001664354.1| prolyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|320115198|ref|YP_004185357.1| prolyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
 gi|226701349|sp|B0KCH5|SYP_THEP3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|166855610|gb|ABY94018.1| prolyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|319928289|gb|ADV78974.1| prolyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
          Length = 570

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 66/134 (49%), Gaps = 7/134 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SGV  +   G ++ + +   +R ++ +   +E+    ++   L ++SG WD +   MF 
Sbjct: 36  ASGVYIYLPLGQRVLRKVEQIVREEMDRAGSQEVLMSALIPAELLKESGRWDVFGPEMFK 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +K  ++     R F L P +      +  + +KSYR+LP+ L +  + +R+E      G+
Sbjct: 96  LKDRNE-----RDFCLGPTHEEVFTDLIRNEVKSYRQLPLILYQIQTKFRDERRPRF-GV 149

Query: 381 MRVRGFTQDDAHVF 394
           MR R F   DA+ F
Sbjct: 150 MRSREFIMKDAYSF 163


>gi|326391122|ref|ZP_08212668.1| prolyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
 gi|325992821|gb|EGD51267.1| prolyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
          Length = 570

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 66/134 (49%), Gaps = 7/134 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SGV  +   G ++ + +   +R ++ +   +E+    ++   L ++SG WD +   MF 
Sbjct: 36  ASGVYIYLPLGQRVLRKVEQIVREEMDRAGSQEVLMSALIPAELLKESGRWDVFGPEMFK 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +K  ++     R F L P +      +  + +KSYR+LP+ L +  + +R+E      G+
Sbjct: 96  LKDRNE-----RDFCLGPTHEEVFTDLIRNEVKSYRQLPLILYQIQTKFRDERRPRF-GV 149

Query: 381 MRVRGFTQDDAHVF 394
           MR R F   DA+ F
Sbjct: 150 MRSREFIMKDAYSF 163


>gi|326692543|ref|ZP_08229548.1| prolyl-tRNA synthetase [Leuconostoc argentinum KCTC 3773]
          Length = 571

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 31/144 (21%), Positives = 69/144 (47%), Gaps = 7/144 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            +G+  +     ++   + + +R ++ + D  E+  P++L   LW++SG +++Y   ++ 
Sbjct: 36  AAGMFAYLPLAQRVLNKIEAIIREEMDRIDANEMLVPEILPAELWEKSGRYETYGPALYK 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            K      +  R F L P +      +    +KSY++LP+ + +  + +R+E      GL
Sbjct: 96  FKN-----RQARDFILGPTHEETFTQLMADDIKSYKKLPLIVYQLQAKFRDENRPRF-GL 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNEC 404
           +R R F   DA+ F   +   ++ 
Sbjct: 150 LRTREFIMKDAYSFSADQAGLDQA 173


>gi|325859754|ref|ZP_08172884.1| phosphoribulokinase/uridine kinase family protein [Prevotella
           denticola CRIS 18C-A]
 gi|325482680|gb|EGC85683.1| phosphoribulokinase/uridine kinase family protein [Prevotella
           denticola CRIS 18C-A]
          Length = 555

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 42/181 (23%), Positives = 80/181 (44%), Gaps = 2/181 (1%)

Query: 18  PVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPEDPRSLAVIRHS 76
           P+ +T SD+ +  +  +    V+  +N KV  L   V     +E +    P  +     S
Sbjct: 21  PIGSTLSDIYKENNLQMTFGPVSAKVNNKVEGLHYRVYHNKDVEYLDLHAPSGIRTYTRS 80

Query: 77  CAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPF 136
              ++ +AV  ++P   V I   + +G+Y +       + D++ +I  +MQEII    P 
Sbjct: 81  LFLVLCKAVHDLYPGSSVVIDIPVSNGYYCNLKLGHAVTPDDVRRIRTRMQEIIDARLPI 140

Query: 137 LKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKK 196
            +   + E+A E+F    +  K ++L S     +V  Y   ++ D   G  + +T Q+  
Sbjct: 141 QRFETTTEEAVEMFNCLGDGQKAKLLRSSGTLYSV-YYVLDDYKDYYYGSMLTNTAQIHL 199

Query: 197 F 197
           F
Sbjct: 200 F 200


>gi|320008235|gb|ADW03085.1| prolyl-tRNA synthetase [Streptomyces flavogriseus ATCC 33331]
          Length = 565

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 45/191 (23%), Positives = 88/191 (46%), Gaps = 17/191 (8%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E  +H+ L R     ++    +G+  W   G K+ + +   +R ++     +E+  P 
Sbjct: 21  DAETLNHKLLVRA---GYVRRTAAGIWSWLPLGKKVLENVTRVVREEMDAIGGQEVLLPA 77

Query: 299 VLDQHLWQQSGHWDSYRANMFAV---KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           +L +  ++ SG +D Y   +F +   K AD        + L P +      V      SY
Sbjct: 78  LLPKEAYEASGRYDEYGDLLFRLQDRKGAD--------YLLGPTHEEIFTQVVKDMCSSY 129

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI-ISI 414
           ++LPV L +  + YR+E +    G++R R F   D++ F T ++   E  ++H    I I
Sbjct: 130 KDLPVILYQIQTKYRDE-ARPRAGVLRGREFQMKDSYSFDTTDEGLAEAYQLHRAAYIRI 188

Query: 415 YKDFGFEKIMV 425
           ++  G +  +V
Sbjct: 189 FERLGLDHRVV 199


>gi|297545340|ref|YP_003677642.1| prolyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|296843115|gb|ADH61631.1| prolyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 570

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 66/134 (49%), Gaps = 7/134 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SGV  +   G ++ + +   +R ++ +   +E+    ++   L ++SG WD +   MF 
Sbjct: 36  ASGVYIYLPLGQRVLRKVEQIIREEMDRAGSQEVLMSALIPAELLKESGRWDVFGPEMFK 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +K  ++     R F L P +      +  + +KSYR+LP+ L +  + +R+E      G+
Sbjct: 96  LKDRNE-----RDFCLGPTHEEVFTDLIRNEVKSYRQLPLILYQIQTKFRDERRPRF-GV 149

Query: 381 MRVRGFTQDDAHVF 394
           MR R F   DA+ F
Sbjct: 150 MRSREFIMKDAYSF 163


>gi|56460839|ref|YP_156120.1| alanyl-tRNA synthetase [Idiomarina loihiensis L2TR]
 gi|81599943|sp|Q5QUV7|SYA_IDILO RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|56179849|gb|AAV82571.1| Alanyl-tRNA synthetase [Idiomarina loihiensis L2TR]
          Length = 865

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 86/176 (48%), Gaps = 31/176 (17%)

Query: 30  ISRSLAKKAVAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIR-HSCAHIMAEAVQSI 88
           I +++A   VA A       LSD V+    EI   +  R   + R HS  H++  A++++
Sbjct: 518 IGKAIAHHGVAKA----AVKLSDSVK---AEI---DSERRENIKRNHSATHLLHAALRNL 567

Query: 89  WPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKAR 147
             E     G ++E D   +DF   +P ++++LAQ+E+++   +  + P   Q ++ ++A+
Sbjct: 568 LGEHVTQKGSLVEADKMRFDFSHFEPVTTEQLAQLEREVNAQVRANLPLQTQLMAIDEAK 627

Query: 148 E-----LFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
           E     LF  K +             E V + R G++  +LC G HV++TG +  F
Sbjct: 628 EAGAMALFGEKYD-------------EQVRVVRMGDFSMELCGGTHVKATGDIGLF 670


>gi|326426858|gb|EGD72428.1| prolyl-tRNA synthetase [Salpingoeca sp. ATCC 50818]
          Length = 447

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 67/144 (46%), Gaps = 7/144 (4%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
           +I + GSG+        ++ Q L S +R ++     +E   P + D+HLWQQSG W    
Sbjct: 37  YIWQAGSGLYALLPMANRVVQRLQSLVRAELNAIGSQECVLPAITDKHLWQQSGRWQEAG 96

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
             +F ++      +    + L   +     A+ +  + S+R LP+ L +    YR+E   
Sbjct: 97  DELFRLE-----DRKGAAYCLAATHEETVTALVSSLVSSHRSLPLYLYQMQPKYRDEMRP 151

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQ 399
             +GL+R R F   D + F + EQ
Sbjct: 152 R-YGLLRCREFMMKDMYTFDSSEQ 174


>gi|225575016|ref|ZP_03783626.1| hypothetical protein RUMHYD_03096 [Blautia hydrogenotrophica DSM
           10507]
 gi|225037767|gb|EEG48013.1| hypothetical protein RUMHYD_03096 [Blautia hydrogenotrophica DSM
           10507]
          Length = 555

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 47/197 (23%), Positives = 86/197 (43%), Gaps = 6/197 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +++T  D  ++ +P      D+     R      + V  NGK+ +L   + R+  ++ +T
Sbjct: 6   VQVTVGD-EVREYPDGICYVDIVREYQREYQDTIMLVMANGKLRELHKHLHRDCELKFVT 64

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEV---QVAIGPIIEDGFYYDFDKEQPFSSDELA 120
             D       + S + I+ +AV  I  +    QV +   I  G+YY          + LA
Sbjct: 65  VADEAGHKTYKRSASMILTKAVYDIAGKENVDQVMLHFSIGSGYYYTVKGRVKIDEEFLA 124

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           Q+ ++M+E++    PF K+ +  + A E+F S++   KV + E       V LY   ++ 
Sbjct: 125 QVRERMRELVNARIPFYKRSVRTDDAVEIFRSQRMMDKVSLFE-FRRVSRVNLYSLEDYQ 183

Query: 181 DLCRGPHVRSTGQVKKF 197
           D   G     TG +  F
Sbjct: 184 DYYYGFMAYDTGYIPYF 200


>gi|167721308|ref|ZP_02404544.1| prolyl-tRNA synthetase [Burkholderia pseudomallei DM98]
          Length = 568

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 7/130 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P V    LWQ+SG W+ Y   +  +K      +    F + P +      +  + +
Sbjct: 58  ELLMPAVQPAELWQESGRWEQYGPELLRIKD-----RKQNEFVIGPTHEEVVTDIARNQI 112

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLI 411
           KSYR++PV   +  + +R+E      G+MR R F   DA+ F    +   E   K+++  
Sbjct: 113 KSYRQMPVNFYQIQTKFRDEIRPRF-GVMRGREFIMKDAYSFDKDHESLKESYKKMYDAY 171

Query: 412 ISIYKDFGFE 421
           + I+   G E
Sbjct: 172 VRIFTRIGLE 181


>gi|45656749|ref|YP_000835.1| prolyl-tRNA synthetase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
 gi|81830828|sp|Q72U06|SYP_LEPIC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|45599985|gb|AAS69472.1| prolyl-tRNA synthetase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
          Length = 576

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 65/138 (47%), Gaps = 7/138 (5%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRA 316
           + +  +G+ F+   G K+ + +   +R ++      E + P +     W+QSG W +   
Sbjct: 32  VRKSSAGLYFYLPLGLKVLKKIEQIVREEMNSTGALEFDLPILTPSDFWEQSGRWSAMGK 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            MF ++   D      ++AL P +      +    LKSY++LPV + +  + +R+E    
Sbjct: 92  EMFRIQDRHDL-----SYALGPTHEESFSFLLKPLLKSYKDLPVNVYQIQTKFRDEIRPR 146

Query: 377 LHGLMRVRGFTQDDAHVF 394
             G++R R F   DA+ F
Sbjct: 147 F-GVIRSREFIMKDAYSF 163


>gi|315126673|ref|YP_004068676.1| prolyl-tRNA synthetase [Pseudoalteromonas sp. SM9913]
 gi|315015187|gb|ADT68525.1| prolyl-tRNA synthetase [Pseudoalteromonas sp. SM9913]
          Length = 574

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 40/166 (24%), Positives = 74/166 (44%), Gaps = 16/166 (9%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ K    E+  P +    LW++SG W  +   +  
Sbjct: 36  ASGLYTWLPSGLRVLRKVENIVREEMDKAGAIEMLMPVIQPADLWEESGRWSEFGPELMR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
                 T +  R FA+ P +           + SY++LP+ L +  +  R+E      G+
Sbjct: 96  F-----TDRHNREFAMGPTHEEVITDFVRKEINSYKQLPITLYQVQTKVRDERRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLK-----IHNLIISIYKDFGFE 421
           MR R FT  DA+ F     + +ECL      +H    +I++  G +
Sbjct: 150 MRAREFTMKDAYSF----HLTDECLDATYQVMHKAYCNIFERLGLD 191


>gi|270264794|ref|ZP_06193058.1| prolyl-tRNA synthetase [Serratia odorifera 4Rx13]
 gi|270041092|gb|EFA14192.1| prolyl-tRNA synthetase [Serratia odorifera 4Rx13]
          Length = 572

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 35/139 (25%), Positives = 67/139 (48%), Gaps = 7/139 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ + +  E+  P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYTWLPTGLRVLKKVENIVREEMNNANAIEVCMPVVQPADLWQESGRWEQYGPELL- 94

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +  D   +  R F L P +      +  + + SY++LP+   +  + +R+E      G+
Sbjct: 95  -RFVD---RGERPFVLGPTHEEVITDLIRNEISSYKQLPLNFFQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQ 399
           MR R F   DA+ F T ++
Sbjct: 150 MRSREFLMKDAYSFHTSQE 168


>gi|110679326|ref|YP_682333.1| prolyl-tRNA synthetase [Roseobacter denitrificans OCh 114]
 gi|114152246|sp|Q168E6|SYP_ROSDO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|109455442|gb|ABG31647.1| prolyl-tRNA synthetase [Roseobacter denitrificans OCh 114]
          Length = 451

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 43/183 (23%), Positives = 81/183 (44%), Gaps = 11/183 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I ++ +G+  W   G+K+ + L + +   +I+  +  +  P +    LW++SG +D+Y  
Sbjct: 32  IKQNAAGIYSWLPLGFKVLRKLENIVHEEQIRAGHVPMLMPTMQSADLWRESGRYDAYGP 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  ++   D     R     P N      +F   + SY++LP+ L      +R+E    
Sbjct: 92  EMLRIRDRQD-----RDMLFGPTNEEMITDIFRSHVSSYKDLPLTLYHIQWKFRDEMRPR 146

Query: 377 LHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
             G+MR R F   D + F  TKE   +   +     +  Y+  G + I ++  + P   +
Sbjct: 147 F-GVMRGREFFMKDGYNFDLTKEDALHAYNRHLVSYLRTYERMGLQAIPMRADSGP---I 202

Query: 436 GSD 438
           G D
Sbjct: 203 GGD 205


>gi|148264838|ref|YP_001231544.1| prolyl-tRNA synthetase [Geobacter uraniireducens Rf4]
 gi|146398338|gb|ABQ26971.1| prolyl-tRNA synthetase [Geobacter uraniireducens Rf4]
          Length = 585

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 49/107 (45%), Gaps = 6/107 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P V    LWQ+SG W+ Y   +   K   DT      F + P +      +    +
Sbjct: 82  ELLMPTVQPAELWQESGRWEQYGKELLRFKDRKDT-----EFCMGPTHEEVITDLVRREV 136

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQ 399
           KSYR+LP+ L +    +R+E      GLMR R F   DA+ F   E+
Sbjct: 137 KSYRQLPINLYQIQGKFRDEIRPRF-GLMRGREFIMKDAYSFDVNEK 182


>gi|226327022|ref|ZP_03802540.1| hypothetical protein PROPEN_00883 [Proteus penneri ATCC 35198]
 gi|225204240|gb|EEG86594.1| hypothetical protein PROPEN_00883 [Proteus penneri ATCC 35198]
          Length = 571

 Score = 54.3 bits (129), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 67/144 (46%), Gaps = 7/144 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + +   +R ++ +    EI+ P V    LW +SG W+ Y   +  
Sbjct: 36  ASGLYDWMPTGVRVLRKIEKIVREEMDNAGSLEISMPVVQPADLWLESGRWEQYGPELL- 94

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            + +D   +  R F L P +      +  + + SY++LP+ L +  + +R+E      G+
Sbjct: 95  -RFSD---RGERPFVLGPTHEEVVTDIVRNEITSYKQLPLNLYQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNEC 404
           MR R F   DA+ F   ++   E 
Sbjct: 150 MRSREFIMKDAYSFHISQESLQET 173


>gi|24215989|ref|NP_713470.1| prolyl-tRNA synthetase [Leptospira interrogans serovar Lai str.
           56601]
 gi|81846319|sp|Q8F148|SYP_LEPIN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|24197213|gb|AAN50488.1|AE011490_3 prolyl-tRNA synthetase [Leptospira interrogans serovar Lai str.
           56601]
          Length = 576

 Score = 54.3 bits (129), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 65/138 (47%), Gaps = 7/138 (5%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRA 316
           + +  +G+ F+   G K+ + +   +R ++      E + P +     W+QSG W +   
Sbjct: 32  VRKSSAGLYFYLPLGLKVLKKIEQIVREEMNSTGALEFDLPILTPSDFWEQSGRWSAMGK 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            MF ++   D      ++AL P +      +    LKSY++LPV + +  + +R+E    
Sbjct: 92  EMFRIQDRHDL-----SYALGPTHEESFSFLLKPLLKSYKDLPVNVYQIQTKFRDEIRPR 146

Query: 377 LHGLMRVRGFTQDDAHVF 394
             G++R R F   DA+ F
Sbjct: 147 F-GVIRSREFIMKDAYSF 163


>gi|134299814|ref|YP_001113310.1| prolyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
 gi|172044305|sp|A4J5Y2|SYP_DESRM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|134052514|gb|ABO50485.1| prolyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
          Length = 569

 Score = 54.3 bits (129), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 80/184 (43%), Gaps = 11/184 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+E   H+ L R      I +  SGV  +     ++ + L   +R +I K   +E+  P 
Sbjct: 17  EAEVVSHQLLLRA---GFIRKTASGVYTYLPLAQRVLKKLRQIIREEIDKQGGQELLMPI 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    +W +SG W  Y   +F +K   D     R F L P +      +    ++SY+++
Sbjct: 74  IQPAEMWLESGRWHVYGPELFRLKDRHD-----RNFCLGPTHEEVITILIRGEVRSYKQM 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN-ECLKIHNLIISIYKD 417
           P+ L +  + YR+E      GL+R R F   D + F   E   +    K+H    SI+  
Sbjct: 129 PLLLYQIQNKYRDERRPRF-GLLRGREFIMKDLYSFDRDEAGLDISYQKMHEAYTSIFSR 187

Query: 418 FGFE 421
            G +
Sbjct: 188 CGVK 191



 Score = 43.9 bits (102), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 31/128 (24%), Positives = 62/128 (48%), Gaps = 13/128 (10%)

Query: 518 CHPVMIHRAVFGSIERFIGIMIENFKGNLPLW---LSPIQAIVTTIT---SSAVEYAQEI 571
           C+ + + R +  +IE       +N+  +  +W   ++P QAIV  +     + ++ A+E+
Sbjct: 440 CYGIGVSRTMAAAIE-------QNYDKDGIIWPASIAPYQAIVIPVAPKDDNQMKIAEEL 492

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
              L    +    D R+E    K ++  +   P+ I+ G+K  +E  + IR+  S  T  
Sbjct: 493 YKALNQAGVETILDDRSERPGVKFKDADLIGYPLRIVVGNKAVTEGVVEIRQRRSGQTDL 552

Query: 632 VSLLDAIP 639
           VS+ D++P
Sbjct: 553 VSVKDSVP 560


>gi|295396369|ref|ZP_06806535.1| proline--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030]
 gi|294970809|gb|EFG46718.1| proline--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030]
          Length = 609

 Score = 54.3 bits (129), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 45/195 (23%), Positives = 89/195 (45%), Gaps = 19/195 (9%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           +++ + H+ L R     +I     G+  W   G ++   + + +R ++ K   +E++ P 
Sbjct: 19  DADVKSHKLLHRAS---YIRRSAPGIYTWLPLGLRVLDKVEAIVRDEMSKAGSQEVHFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L    +++SG W+++   +F  +  D    D        +  P H  VF   +K    S
Sbjct: 76  LLPAEPYEKSGRWEAFGEGIF--RLQDRKKADY-------LLAPTHEEVFTLLVKDLYSS 126

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIIS 413
           Y++LP  L +  + YR+E +    GL+R R F   DA+ F T +   +    K+    I+
Sbjct: 127 YKDLPASLYQIQTKYRDE-ARPRAGLLRGREFIMKDAYSFDTDDAGLDAAYEKMRKAYIN 185

Query: 414 IYKDFGFEKIMVKLS 428
           +Y       +MV+ +
Sbjct: 186 VYNRLQLPFVMVEAT 200


>gi|282877866|ref|ZP_06286677.1| phosphoribulokinase/Uridine kinase family protein [Prevotella
           buccalis ATCC 35310]
 gi|281300013|gb|EFA92371.1| phosphoribulokinase/Uridine kinase family protein [Prevotella
           buccalis ATCC 35310]
          Length = 553

 Score = 54.3 bits (129), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 39/184 (21%), Positives = 85/184 (46%), Gaps = 2/184 (1%)

Query: 15  KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVI 73
           ++  + +T SDV +  +  +    +   +N KV  ++  +     +E +   D  +    
Sbjct: 16  QDVAIGSTLSDVFKQFNLKMPYGPICARVNNKVVGMNYQLYHNKDVEFLDMHDASASRNY 75

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
             +   I+ +AV  ++P  +V I   +  G+Y +    +  + ++  +I ++MQ+II   
Sbjct: 76  TRTLFFILCKAVHDLYPGSRVVIDIPVSKGYYINLHIGREVTDEDATRIRERMQQIIDEK 135

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQ 193
            P  +  +  E+A  +FE K +  KV++L S+ +   V  YR  ++ D   G  + +T  
Sbjct: 136 IPIERFEVRTEEAIRMFEQKGDEAKVKLLRSVGSLYTV-YYRIDDYVDYYYGALLTNTSD 194

Query: 194 VKKF 197
           +  F
Sbjct: 195 IYLF 198


>gi|182435611|ref|YP_001823330.1| prolyl-tRNA synthetase [Streptomyces griseus subsp. griseus NBRC
           13350]
 gi|226701340|sp|B1VYP2|SYP_STRGG RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|178464127|dbj|BAG18647.1| putative prolyl-tRNA synthetase [Streptomyces griseus subsp.
           griseus NBRC 13350]
          Length = 567

 Score = 54.3 bits (129), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 45/192 (23%), Positives = 88/192 (45%), Gaps = 19/192 (9%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R     ++  + +G+  W   G K+   + + +R ++     +E+  P 
Sbjct: 21  DAETLSHKLLVRA---GYVRRNAAGIWSWLPLGKKVLDNISNVVREEMDAIGAQEVLLPA 77

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L +  ++ SG W+ Y   +F +K  D    D        +  P H  +F   +K    S
Sbjct: 78  LLPKEPYEASGRWEEYGDLLFRLK--DRKGGDY-------LLGPTHEEIFTQTVKDQCTS 128

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI-IS 413
           Y++LPV L +  + YR+E +    G++R R F   D++ F T ++       +H    I 
Sbjct: 129 YKDLPVMLYQIQTKYRDE-ARPRSGVLRGREFQMKDSYSFDTTDEGLAHSYALHRAAYIK 187

Query: 414 IYKDFGFEKIMV 425
           I++  G +  +V
Sbjct: 188 IFERLGLDHRIV 199


>gi|85704335|ref|ZP_01035438.1| prolyl-tRNA synthetase [Roseovarius sp. 217]
 gi|85671655|gb|EAQ26513.1| prolyl-tRNA synthetase [Roseovarius sp. 217]
          Length = 451

 Score = 54.3 bits (129), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 48/201 (23%), Positives = 87/201 (43%), Gaps = 14/201 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E++   HR + R      I +  +G+  W   G+KI + L + +   +++  +  +  P 
Sbjct: 17  EAQIASHRLMLRAG---MIKQASAGIYSWLPLGFKILRKLENIVHEEQVRAGHIPVLMPT 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW++SG +D Y A M  +K   D     R     P N      +F   + SY++L
Sbjct: 74  LQSADLWRESGRYDDYGAEMLRIKDRHD-----RDMLYGPTNEELITDIFRAHVGSYKDL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKD 417
           P+ L      +R+E      G+MR R F   D + F  TK+   +   +     +  Y+ 
Sbjct: 129 PLTLYHIQWKFRDEVRPRF-GVMRGREFLMKDGYNFDLTKDDALHAYNRHMVSYLRTYER 187

Query: 418 FGFEKIMVKLSTRPEKRVGSD 438
            G + I ++  + P   +G D
Sbjct: 188 MGLQAIPMRADSGP---IGGD 205


>gi|113461448|ref|YP_719517.1| prolyl-tRNA synthetase [Haemophilus somnus 129PT]
 gi|123031424|sp|Q0I4S8|SYP_HAES1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|112823491|gb|ABI25580.1| prolyl-tRNA synthetase [Haemophilus somnus 129PT]
          Length = 571

 Score = 54.3 bits (129), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 39/146 (26%), Positives = 69/146 (47%), Gaps = 11/146 (7%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ K    E+  P V    LWQ+S  W+ Y   +  
Sbjct: 36  ASGLYNWLPTGLRVLKKVENIVREEMNKSGAIEVEMPVVQPAELWQESQRWEQYGPELL- 94

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +  D   +  R F L P +      + +  + SY++LP+ L +  + +R+E      G+
Sbjct: 95  -RFVD---RGNRDFVLGPTHEEVITDLVHREVSSYKQLPLNLYQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLK 406
           MR R F   DA+ F T +    ECL+
Sbjct: 150 MRGREFLMKDAYSFHTSK----ECLQ 171


>gi|293394735|ref|ZP_06639027.1| proline-tRNA ligase [Serratia odorifera DSM 4582]
 gi|291422861|gb|EFE96098.1| proline-tRNA ligase [Serratia odorifera DSM 4582]
          Length = 572

 Score = 54.3 bits (129), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 34/139 (24%), Positives = 68/139 (48%), Gaps = 7/139 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ + +  E++ P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYTWLPTGLRVLKKVENIVREEMNNANAIEVSMPVVQPADLWQESGRWEQYGPELL- 94

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +  D   +  R F L P +      +  + + SY++LP+   +  + +R+E      G+
Sbjct: 95  -RFVD---RGERPFVLGPTHEEVITDLIRNEISSYKQLPLNFFQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQ 399
           MR R F   D++ F T ++
Sbjct: 150 MRSREFLMKDSYSFHTTQE 168


>gi|327312853|ref|YP_004328290.1| phosphoribulokinase/uridine kinase family protein [Prevotella
           denticola F0289]
 gi|326944467|gb|AEA20352.1| phosphoribulokinase/uridine kinase family protein [Prevotella
           denticola F0289]
          Length = 555

 Score = 54.3 bits (129), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 42/181 (23%), Positives = 80/181 (44%), Gaps = 2/181 (1%)

Query: 18  PVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIRHS 76
           P+ +T SD+ +  +  +    V+  +N KV  L   V     +E +    P  +     S
Sbjct: 21  PIGSTLSDIYKENNLQMTFGPVSAKVNNKVEGLHYRVYHNKDVEYLDLHAPSGIRTYTRS 80

Query: 77  CAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPF 136
              ++ +AV  ++P   V I   + +G+Y +       + D++ +I  +MQEII    P 
Sbjct: 81  LFLVLCKAVHDLYPGSSVVIDIPVSNGYYCNLKLGHAVTPDDVRRIRTRMQEIIDARLPI 140

Query: 137 LKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKK 196
            +   + E+A E+F    +  K ++L S     +V  Y   ++ D   G  + +T Q+  
Sbjct: 141 QRFETTTEEAVEMFNRLGDGQKAKLLRSSGTLYSV-YYVLDDYKDYYYGSMLTNTAQIHL 199

Query: 197 F 197
           F
Sbjct: 200 F 200


>gi|300361905|ref|ZP_07058082.1| proline--tRNA ligase [Lactobacillus gasseri JV-V03]
 gi|300354524|gb|EFJ70395.1| proline--tRNA ligase [Lactobacillus gasseri JV-V03]
          Length = 565

 Score = 54.3 bits (129), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 72/146 (49%), Gaps = 8/146 (5%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
           +I +  +GV  +   G+++ +   + +  ++ + +  E+  P +L   LWQ+SG +  Y 
Sbjct: 31  YIRQVTAGVYAYLPLGYRVLRKAENIIEEEMNNINVPEMIMPHLLPATLWQESGRYKKYG 90

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
           A MF ++      +  R   L P +      +    LKSY+++P+ L +  + +R+E   
Sbjct: 91  AEMFKLQD-----RHGRESLLGPTHEETFTEIVAKNLKSYKQMPLALYQIQTKFRDENRP 145

Query: 376 SLHGLMRVRGFTQDDAHVF-CTKEQM 400
              GL+R R F   D + F  T+EQ+
Sbjct: 146 RF-GLLRGREFVMLDGYSFAATREQL 170


>gi|329893675|ref|ZP_08269809.1| Prolyl-tRNA synthetase [gamma proteobacterium IMCC3088]
 gi|328923602|gb|EGG30914.1| Prolyl-tRNA synthetase [gamma proteobacterium IMCC3088]
          Length = 571

 Score = 54.3 bits (129), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 44/183 (24%), Positives = 78/183 (42%), Gaps = 11/183 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQ 298
           ++E   HR + R   +  +A   SG+  W   G K+ + +   +R ++      E+  P 
Sbjct: 17  DAEVISHRLMLRAGMIKKLA---SGLYTWMPLGLKVLRKVERIVREEMDAAGAIELLMPV 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    LWQ+SG W  Y   +  +       +  R F L P +      +  + L SY++L
Sbjct: 74  VQPAELWQESGRWAQYGPELLRMHD-----RHTREFCLGPTHEEVITDIARNELSSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKD 417
           P+   +  + +R+E      G+MR R FT  DA+ F   +    E    +H    +++  
Sbjct: 129 PLNFYQIQTKFRDEIRPRF-GVMRAREFTMKDAYSFHIDQASLEETYWVMHRAYSNVFDR 187

Query: 418 FGF 420
            G 
Sbjct: 188 LGL 190


>gi|205373425|ref|ZP_03226229.1| prolyl-tRNA synthetase [Bacillus coahuilensis m4-4]
          Length = 494

 Score = 54.3 bits (129), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 40/166 (24%), Positives = 80/166 (48%), Gaps = 10/166 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G ++   +   +R ++++    E+  P 
Sbjct: 17  DAEIKSHQLLLRA---GFMKQNTSGIYSFLPLGKRVLAKVEQIIREEMENAGVVEMFMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W +Y + +  +K      +  R FAL   +     ++    +KSY++L
Sbjct: 74  LQQAELWQESGRWYTYGSELMRMKD-----RHGREFALGATHEEVITSLLRDDVKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           P+ L +  + YR+E      GL+R R F   DA+ F   ++  +E 
Sbjct: 129 PLSLYQIQTKYRDEARPRF-GLLRGREFIMKDAYSFHASKESLDET 173


>gi|220924023|ref|YP_002499325.1| prolyl-tRNA synthetase [Methylobacterium nodulans ORS 2060]
 gi|254782908|sp|B8IUW4|SYP_METNO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|219948630|gb|ACL59022.1| prolyl-tRNA synthetase [Methylobacterium nodulans ORS 2060]
          Length = 443

 Score = 54.3 bits (129), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 47/205 (22%), Positives = 84/205 (40%), Gaps = 18/205 (8%)

Query: 236 YFL-------EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKI 287
           YFL       +E+E   HR + R      I ++ +G+  W   G ++   +   +R  + 
Sbjct: 6   YFLPILRETPKEAEIVSHRLMLRAG---MIRQEAAGIYAWLPLGLRVLNRVTEVIRAEQD 62

Query: 288 KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
           +    E+  P +    LW++SG +++Y   M  ++   +     R     P N     A+
Sbjct: 63  RSGAIELLMPTIQSAELWRESGRYEAYGKEMLRIRDRHE-----REMLFGPTNEEMITAI 117

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-K 406
           F   ++SY++LP  L      +R+E      G MR R F   DA+ F   E        K
Sbjct: 118 FRSAVRSYKDLPKNLYHIQWKFRDEVRPRF-GTMRSREFLMKDAYSFDLDEAGARHAYNK 176

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRP 431
           +    +  +   G + I ++  T P
Sbjct: 177 MFVAYLRTFARLGLKAIPMRAETGP 201


>gi|170718445|ref|YP_001783662.1| prolyl-tRNA synthetase [Haemophilus somnus 2336]
 gi|189083500|sp|B0UWK9|SYP_HAES2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|168826574|gb|ACA31945.1| prolyl-tRNA synthetase [Haemophilus somnus 2336]
          Length = 571

 Score = 54.3 bits (129), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 39/146 (26%), Positives = 69/146 (47%), Gaps = 11/146 (7%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ K    E+  P V    LWQ+S  W+ Y   +  
Sbjct: 36  ASGLYNWLPTGLRVLKKVENIVREEMNKSGAIEVEMPVVQPAELWQESQRWEQYGPELL- 94

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +  D   +  R F L P +      + +  + SY++LP+ L +  + +R+E      G+
Sbjct: 95  -RFVD---RGNRDFVLGPTHEEVITDLVHREVSSYKQLPLNLYQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLK 406
           MR R F   DA+ F T +    ECL+
Sbjct: 150 MRGREFLMKDAYSFHTSK----ECLQ 171


>gi|332523321|ref|ZP_08399573.1| proline--tRNA ligase [Streptococcus porcinus str. Jelinkova 176]
 gi|332314585|gb|EGJ27570.1| proline--tRNA ligase [Streptococcus porcinus str. Jelinkova 176]
          Length = 617

 Score = 54.3 bits (129), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  +++ +K  + +      F L P +      +    +
Sbjct: 68  EMLAPALLTADLWRESGRYETYGEDLYKLKNRESS-----DFILGPTHEETFTTLIRDAV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +  + YR+E     +GL+R R F   D + F
Sbjct: 123 KSYKQLPLNLYQIQAKYRDEKR-PRNGLLRTREFIMKDGYSF 163


>gi|326776245|ref|ZP_08235510.1| prolyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1]
 gi|326656578|gb|EGE41424.1| prolyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1]
          Length = 567

 Score = 54.3 bits (129), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 45/192 (23%), Positives = 88/192 (45%), Gaps = 19/192 (9%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R     ++  + +G+  W   G K+   + + +R ++     +E+  P 
Sbjct: 21  DAETLSHKLLVRA---GYVRRNAAGIWSWLPLGKKVLDNISNVVREEMDAIGAQEVLLPA 77

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L +  ++ SG W+ Y   +F +K  D    D        +  P H  +F   +K    S
Sbjct: 78  LLPKEPYEASGRWEEYGDLLFRLK--DRKGGDY-------LLGPTHEEIFTQTVKDQCTS 128

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI-IS 413
           Y++LPV L +  + YR+E +    G++R R F   D++ F T ++       +H    I 
Sbjct: 129 YKDLPVMLYQIQTKYRDE-ARPRSGVLRGREFQMKDSYSFDTTDEGLAHSYALHRAAYIK 187

Query: 414 IYKDFGFEKIMV 425
           I++  G +  +V
Sbjct: 188 IFERLGLDHRIV 199


>gi|20808685|ref|NP_623856.1| prolyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
 gi|81848077|sp|Q8R7S9|SYP_THETN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|20517322|gb|AAM25460.1| Prolyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
          Length = 573

 Score = 54.3 bits (129), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 37/167 (22%), Positives = 82/167 (49%), Gaps = 8/167 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            +G+  +   G ++ + +   +R ++ ++  +E+    ++   L++++G WD +   MF 
Sbjct: 36  AAGIYVYLPLGKRVLKKVEEIVREEMDREGSQEVLMSALIPAELFKETGRWDVFGPEMFK 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +K  ++     R F L P +      +  + +KSYR+LP+ L +  + +R+E      G+
Sbjct: 96  LKDRNE-----RDFCLGPTHEEVFTDLVRNEVKSYRQLPLILYQIQTKFRDERRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFEKIMVK 426
           MR R F   DA+ F    +  +E   K++     I+   G + ++V+
Sbjct: 150 MRSREFIMKDAYSFDADWEGLDESFNKMYRAYCRIFDRCGLKYLVVE 196


>gi|42522107|ref|NP_967487.1| hypothetical protein Bd0501 [Bdellovibrio bacteriovorus HD100]
 gi|48428503|sp|P61698|SYA_BDEBA RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|39574638|emb|CAE78480.1| alaS [Bdellovibrio bacteriovorus HD100]
          Length = 907

 Score = 54.3 bits (129), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 75/154 (48%), Gaps = 23/154 (14%)

Query: 61  IITPEDP--RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIED-GFYYDFDKEQPFSSD 117
           ++T  DP  R      HS  H++  A++ +        G +++     +DF   +P SS+
Sbjct: 565 VVTGVDPVERRNTAANHSATHLLHAALRKVLGTHVTQAGSLVDSQKTRFDFTHNKPVSSE 624

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVT 172
           E+ +IE  + E IAR +P   + +SH+ A E     LF  +K A  V +L          
Sbjct: 625 EIKKIEDLVNEQIARCNPVQTEMMSHKAALEKGAMALF-GEKYASDVRVL---------- 673

Query: 173 LYRQGEW-FDLCRGPHVRSTGQVKKFFKLMKVAG 205
               G++  +LC G HV++T ++ + FK++  AG
Sbjct: 674 --TMGDFSCELCGGTHVKNTSEI-RLFKIVSEAG 704


>gi|326390601|ref|ZP_08212157.1| phosphoribulokinase/uridine kinase [Thermoanaerobacter ethanolicus
           JW 200]
 gi|325993426|gb|EGD51862.1| phosphoribulokinase/uridine kinase [Thermoanaerobacter ethanolicus
           JW 200]
          Length = 547

 Score = 54.3 bits (129), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 44/187 (23%), Positives = 86/187 (45%), Gaps = 3/187 (1%)

Query: 12  GSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSL 70
           G++  +P      ++A+          VA  ++ ++ DL+  V ++ ++E +        
Sbjct: 7   GNVYEYPEGTKLENIAKDFEHRYNGIIVAAKVDNELRDLNYTVLKDSTVEFVDTTIEEGT 66

Query: 71  AVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEII 130
            + R S   +  +AV+ + P   V I   +  G Y +       ++  ++ I+K+M+EII
Sbjct: 67  RIYRRSLTFVFIKAVKELLPGATVTIEHSLGKGLYCEIHGYS-LNNKIVSMIKKRMEEII 125

Query: 131 ARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRS 190
            +D    ++ L  E+A +LFE +    KV++ +    K+ V +Y      D    P V S
Sbjct: 126 EKDLKIERKMLPKEEAIKLFEKEGLTEKVKLFKDT-DKDKVPVYYCDGTVDFFYSPCVPS 184

Query: 191 TGQVKKF 197
           TG +K F
Sbjct: 185 TGYLKVF 191


>gi|163733470|ref|ZP_02140913.1| prolyl-tRNA synthetase [Roseobacter litoralis Och 149]
 gi|161393258|gb|EDQ17584.1| prolyl-tRNA synthetase [Roseobacter litoralis Och 149]
          Length = 451

 Score = 54.3 bits (129), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 43/183 (23%), Positives = 81/183 (44%), Gaps = 11/183 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I ++ +G+  W   G+K+ + L + +   +I+  +  +  P +    LW++SG +D+Y  
Sbjct: 32  IKQNAAGIYSWLPLGFKVLRKLENIVHEEQIRAGHVPMLMPTMQSADLWRESGRYDAYGP 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  ++   D     R     P N      +F   + SY++LP+ L      +R+E    
Sbjct: 92  EMLRIRDRQD-----RDMLFGPTNEEMITDIFRSHVSSYKDLPLTLYHIQWKFRDEMRPR 146

Query: 377 LHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
             G+MR R F   D + F  TKE   +   +     +  Y+  G + I ++  + P   +
Sbjct: 147 F-GVMRGREFFMKDGYNFDLTKEDALHAYNRHLVSYLRTYERMGLQAIPMRADSGP---I 202

Query: 436 GSD 438
           G D
Sbjct: 203 GGD 205


>gi|294649969|ref|ZP_06727359.1| alanine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
 gi|292824138|gb|EFF82951.1| alanine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
          Length = 884

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 72/155 (46%), Gaps = 15/155 (9%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSS 116
           S+E     D R+     HS  H++  A++ I  + VQ     +  D   +DF  +QP + 
Sbjct: 552 SVEATVKADIRAATARNHSATHLLHAALRQILGDHVQQKGSLVASDILRFDFANDQPVTF 611

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESK-KEAYKVEILESIPAKEN 170
           D+L QIE+ +   +  ++P   + L  E A+      LF  K  +  +V  + S+  ++N
Sbjct: 612 DQLQQIERLVNAEVLANTPVTTELLDIETAKAKGAMMLFGEKYGDEVRVLSMGSVIEEKN 671

Query: 171 VTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAG 205
            ++       +LC G HV+ TG +   FK+    G
Sbjct: 672 FSI-------ELCGGIHVKRTGDI-GLFKITSEGG 698


>gi|330936741|gb|EGH40917.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. pisi str. 1704B]
          Length = 548

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 64/133 (48%), Gaps = 7/133 (5%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG+  W   G ++ + + + +R ++      EI  P +    LWQ+SG W+ Y   +  +
Sbjct: 14  SGLYTWLPMGLRVLRKVEAIVREEMDAAGALEILMPGIQPAELWQESGRWEQYGPEL--M 71

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           +  D   +  R F L P +      +  + L SY++LP+ L +  + +R+E      GLM
Sbjct: 72  RLVD---RHNREFCLGPTHEEVITDLARNELNSYKQLPINLYQIQTKFRDEIRPRF-GLM 127

Query: 382 RVRGFTQDDAHVF 394
           R R F   DA+ F
Sbjct: 128 RGREFVMKDAYSF 140


>gi|299823039|ref|ZP_07054925.1| proline--tRNA ligase [Listeria grayi DSM 20601]
 gi|299816568|gb|EFI83806.1| proline--tRNA ligase [Listeria grayi DSM 20601]
          Length = 566

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 72/156 (46%), Gaps = 10/156 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E ++H+ L R      I +  SGV  +        + +   +R ++ K    EI  P 
Sbjct: 17  DAEVKNHQLLLRAG---FIRQTASGVYSYLPLATLTLRNIERIIREELNKVGASEILMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW++SG W  Y   +  +K  ++     R FAL P +     A+    +KSY+ L
Sbjct: 74  LQPAELWEESGRWADYGPELMRLKDRNN-----RDFALGPTHEEVITALLRDEIKSYKRL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           P+ L +  + +R+E      GL+R R F   DA+ F
Sbjct: 129 PLTLYQIQTKFRDEKRPRF-GLLRGREFIMKDAYSF 163


>gi|29829100|ref|NP_823734.1| prolyl-tRNA synthetase [Streptomyces avermitilis MA-4680]
 gi|81838439|sp|Q82K46|SYP1_STRAW RecName: Full=Prolyl-tRNA synthetase 1; AltName: Full=Proline--tRNA
           ligase 1; Short=ProRS 1
 gi|29606206|dbj|BAC70269.1| putative prolyl-tRNA synthetase [Streptomyces avermitilis MA-4680]
          Length = 564

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 43/192 (22%), Positives = 89/192 (46%), Gaps = 19/192 (9%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E  +H+ L R     ++    +G+  W   G K+ + +   +R ++     +E+  P 
Sbjct: 21  DAETLNHKLLVRA---DYVRRTAAGIWSWLPLGKKVLENVARVVREEMDAMGGQEVLLPA 77

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L +  ++ +G W+ Y   +F        +KD +    + +  P H  +F   +K    S
Sbjct: 78  LLPKEPYEATGRWEEYGPELF-------RLKDRK--GAEYLLGPTHEEIFTQLVKDQCSS 128

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH-NLIIS 413
           Y++LPV L +  + YR+E +    G++R R F   D++ F T ++   +   +H    I 
Sbjct: 129 YKDLPVILYQIQAKYRDE-ARPRAGILRGREFLMKDSYSFDTADEGLAQSYALHREAYIK 187

Query: 414 IYKDFGFEKIMV 425
           I+   G +  +V
Sbjct: 188 IFNRLGLDHRIV 199


>gi|84498663|ref|ZP_00997420.1| prolyl-tRNA synthetase [Janibacter sp. HTCC2649]
 gi|84381060|gb|EAP96946.1| prolyl-tRNA synthetase [Janibacter sp. HTCC2649]
          Length = 593

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 44/195 (22%), Positives = 86/195 (44%), Gaps = 25/195 (12%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   HR L R     ++     G+  W   G ++ + + + +R ++     +E+  P 
Sbjct: 17  DAELPGHRLLVRAG---YVRRAAPGIYTWLPLGLRVLRKVEAIVREEMDAIGAQELTFPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVK-------CADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           +L +  ++ +  W  Y  N+F +K           T +++ T A+K M            
Sbjct: 74  LLPREPYEATNRWTEYGDNIFRLKDRKGGDYLLGPTHEEMFTLAVKDM------------ 121

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI 411
             SY++LP+ L +  + YR+E +    GL+R R F   D++ F   ++      + H   
Sbjct: 122 FSSYKDLPLSLYQIQNKYRDE-ARPRAGLLRGREFVMKDSYSFDVSDEGLEASYQAHRAA 180

Query: 412 -ISIYKDFGFEKIMV 425
            I I+   GFE ++V
Sbjct: 181 YIKIFDRLGFEYVIV 195


>gi|289579170|ref|YP_003477797.1| prolyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
 gi|289528883|gb|ADD03235.1| prolyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
          Length = 570

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 66/134 (49%), Gaps = 7/134 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SGV  +   G ++ + +   +R ++ +   +E+    ++   L ++SG WD +   MF 
Sbjct: 36  ASGVYIYLPLGQRVLRKVEQIVREEMDRAGSQEVLMSALIPAELLKESGRWDVFGPEMFK 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +K  ++     R F L P +      +  + +KSYR+LP+ L +  + +R+E      G+
Sbjct: 96  LKDRNE-----RDFCLGPTHEEVFTDLIRNEVKSYRQLPLILYQIQTKFRDERRPRF-GV 149

Query: 381 MRVRGFTQDDAHVF 394
           MR R F   DA+ F
Sbjct: 150 MRSREFIMKDAYSF 163


>gi|146295796|ref|YP_001179567.1| phosphoribulokinase/uridine kinase [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|145409372|gb|ABP66376.1| phosphoribulokinase/uridine kinase [Caldicellulosiruptor
           saccharolyticus DSM 8903]
          Length = 555

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 44/181 (24%), Positives = 85/181 (46%), Gaps = 4/181 (2%)

Query: 18  PVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIRHS 76
           PV     D+            +A  ++ ++ +L   V ++  I+ I       + + R S
Sbjct: 23  PVGTVLLDLVPKFQILFKSPIIAAKVDNEIKELKYVVSKDCKIKFIDMTQEDGMRIYRRS 82

Query: 77  CAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPF 136
              ++  A + ++ E  V +   +  G Y + +  +  S +++  I +KMQEII +D PF
Sbjct: 83  LIFVLIVATRMLFKEA-VNVQHSLSKGLYCEVENRK-LSEEDILLIRQKMQEIIEKDIPF 140

Query: 137 LKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKK 196
            ++ ++ E+A +LFES     K   ++     ++V +Y  G++ D   G  V STG +K 
Sbjct: 141 RREKVTREEAVKLFESMGYLDKARTVK-FSENDHVYIYYCGDFVDYFYGHMVPSTGYLKI 199

Query: 197 F 197
           F
Sbjct: 200 F 200


>gi|330959255|gb|EGH59515.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. maculicola str.
           ES4326]
          Length = 571

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 64/133 (48%), Gaps = 7/133 (5%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG+  W   G ++ + + + +R ++      EI  P +    LWQ+SG W+ Y   +  +
Sbjct: 37  SGLYTWLPMGLRVLRKVEAIVREEMDAAGALEILMPGIQPAELWQESGRWEQYGPEL--M 94

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           +  D   +  R F L P +      +  + L SY++LP+ L +  + +R+E      GLM
Sbjct: 95  RLVD---RHNREFCLGPTHEEVITDLARNELNSYKQLPINLYQIQTKFRDEIRPRF-GLM 150

Query: 382 RVRGFTQDDAHVF 394
           R R F   DA+ F
Sbjct: 151 RGREFVMKDAYSF 163


>gi|116629465|ref|YP_814637.1| prolyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323]
 gi|282850819|ref|ZP_06260193.1| proline--tRNA ligase [Lactobacillus gasseri 224-1]
 gi|311110887|ref|ZP_07712284.1| proline--tRNA ligase [Lactobacillus gasseri MV-22]
 gi|122273597|sp|Q044C3|SYP_LACGA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|116095047|gb|ABJ60199.1| Prolyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323]
 gi|282557771|gb|EFB63359.1| proline--tRNA ligase [Lactobacillus gasseri 224-1]
 gi|311066041|gb|EFQ46381.1| proline--tRNA ligase [Lactobacillus gasseri MV-22]
          Length = 565

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 72/146 (49%), Gaps = 8/146 (5%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
           +I +  +GV  +   G+++ +   + +  ++ + +  E+  P +L   LWQ+SG +  Y 
Sbjct: 31  YIRQVTAGVYAYLPLGYRVLRKAENIIEEEMNNINVPEMIMPHLLPATLWQESGRYKKYG 90

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
           A MF ++      +  R   L P +      +    LKSY+++P+ L +  + +R+E   
Sbjct: 91  AEMFKLQD-----RHGRESLLGPTHEETFTEIVAKNLKSYKQMPLALYQIQTKFRDENRP 145

Query: 376 SLHGLMRVRGFTQDDAHVF-CTKEQM 400
              GL+R R F   D + F  T+EQ+
Sbjct: 146 RF-GLLRGREFVMLDGYSFAATREQL 170


>gi|117925064|ref|YP_865681.1| prolyl-tRNA synthetase [Magnetococcus sp. MC-1]
 gi|152112926|sp|A0L8I2|SYP_MAGSM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|117608820|gb|ABK44275.1| prolyl-tRNA synthetase [Magnetococcus sp. MC-1]
          Length = 576

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 34/151 (22%), Positives = 70/151 (46%), Gaps = 7/151 (4%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I + G+G+  W   G K+ + + + +R+++ +   +E+  P +    LW++SG W  Y  
Sbjct: 32  IRQLGAGIYTWLPMGLKVLRKVETIVRQEMDRAGAQEVLMPSIQPAELWEESGRWKMYGK 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            +  +     T +  R+F   P +      +    + SY++LP    +  + +R+E    
Sbjct: 92  ELLRI-----TDRHNRSFCYGPTHEEVISDLVRREIHSYKQLPANFYQIQTKFRDEVRPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
             G+MR R F   DA+ F   E   ++  ++
Sbjct: 147 F-GIMRGREFLMKDAYSFDIDEAALDKSYRL 176


>gi|330968902|gb|EGH68968.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 571

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 64/133 (48%), Gaps = 7/133 (5%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG+  W   G ++ + + + +R ++      EI  P +    LWQ+SG W+ Y   +  +
Sbjct: 37  SGLYTWLPMGLRVLRKVEAIVREEMDAAGALEILMPGIQPAELWQESGRWEQYGPEL--M 94

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           +  D   +  R F L P +      +  + L SY++LP+ L +  + +R+E      GLM
Sbjct: 95  RLVD---RHNREFCLGPTHEEVITDLARNELNSYKQLPINLYQIQTKFRDEIRPRF-GLM 150

Query: 382 RVRGFTQDDAHVF 394
           R R F   DA+ F
Sbjct: 151 RGREFVMKDAYSF 163


>gi|326925418|ref|XP_003208912.1| PREDICTED: probable prolyl-tRNA synthetase, mitochondrial-like
           [Meleagris gallopavo]
          Length = 470

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 8/140 (5%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA-VFNH 350
           +++N P +    LW+ SG W+     +F  + AD   K+   + L P +       V  H
Sbjct: 110 QKVNMPSLSSAELWRASGRWEQMGPELF--RLADRHSKE---YCLGPTHEEAVTELVAAH 164

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHN 409
              SYR LP+RL +    +R+EP     GL+R R F   D + F T E+      + +  
Sbjct: 165 SNLSYRHLPLRLYQVTRKFRDEPKPRF-GLLRSREFYMKDMYTFDTSEEAARHTYELVCR 223

Query: 410 LIISIYKDFGFEKIMVKLST 429
              S++K  G   + V+ +T
Sbjct: 224 AYRSLFKHLGLRCVQVRAAT 243


>gi|296536135|ref|ZP_06898264.1| proline--tRNA ligase [Roseomonas cervicalis ATCC 49957]
 gi|296263547|gb|EFH10043.1| proline--tRNA ligase [Roseomonas cervicalis ATCC 49957]
          Length = 436

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 49/186 (26%), Positives = 79/186 (42%), Gaps = 17/186 (9%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYR 315
           I +  +G+  W   G ++ Q  +S + R+ +D    +EI  P +    LW+QSG +D Y 
Sbjct: 32  IRQTSAGIYAWLPLGLRVLQK-VSQIVREEQDAAGAQEILMPTIQSAELWKQSGRYDDYG 90

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
             M  +     T +  R     P N      +F    KSYR+LP  L      +R+E   
Sbjct: 91  KEMLRI-----TDRHEREMLFGPTNEEMVTDLFKSYAKSYRDLPRNLYHIQWKFRDEIRP 145

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF---GFEKIMVKLSTRPE 432
              G+MR R F   DA+ F    +     L    + ++  + F   G + I ++  T P 
Sbjct: 146 RF-GVMRGREFLMKDAYSFDIDAEAAR--LSYKKMFVAYLRTFARMGLKAIPMRADTGP- 201

Query: 433 KRVGSD 438
             +G D
Sbjct: 202 --IGGD 205


>gi|253583421|ref|ZP_04860619.1| proline-tRNA ligase [Fusobacterium varium ATCC 27725]
 gi|251833993|gb|EES62556.1| proline-tRNA ligase [Fusobacterium varium ATCC 27725]
          Length = 569

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 85/185 (45%), Gaps = 11/185 (5%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
           +E+E   H+ L R      I +  SGV  +   G+K  + + + +R ++ +   +EI  P
Sbjct: 16  KEAETASHKLLLRA---GMIKKLTSGVYTYLPLGYKALRKVENIVREEMNRAGSQEILMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW++SG WD     M  +K  D   ++ R F L P +      +  + + SY+ 
Sbjct: 73  VLQPAELWKESGRWDVMGPLM--MKLQD---RNKRDFVLGPTHEEVITDLIRNDISSYKS 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYK 416
           LP+ L +  + +R+E      GLMR R F   D + F  T E +  E L + +    I+ 
Sbjct: 128 LPLSLYQIQTKFRDEIRPRF-GLMRGREFVMKDGYSFHATVESLDEEFLNMRDTYSRIFS 186

Query: 417 DFGFE 421
             G +
Sbjct: 187 RCGLK 191


>gi|83589892|ref|YP_429901.1| prolyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
 gi|114152213|sp|Q2RJN1|SYP_MOOTA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|83572806|gb|ABC19358.1| prolyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
          Length = 573

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 43/184 (23%), Positives = 85/184 (46%), Gaps = 11/184 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+E   H+ L R      I +  +G+  +   G ++   +   +R ++ +   +E+  P 
Sbjct: 17  EAEIVSHQLLLRGG---FIRKAAAGIYTYLPLGRRVLAKIEQIIREEMDRAGGQEVVLPI 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W+ Y   MF ++      +  R F L P +     A+    + SY++L
Sbjct: 74  IQPAELWQESGRWEVYGEEMFRLQ-----DRHRRQFCLGPTHEEIITALVRSEVTSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKD 417
           P+ L +  + YR+E      GL+R R F   D + F   ++  N+   K++    ++++ 
Sbjct: 129 PLLLYQIQNKYRDERRPRF-GLLRGREFIMKDLYSFDLDQEGLNQSYRKMYQAYSNVFRR 187

Query: 418 FGFE 421
            G +
Sbjct: 188 CGLD 191


>gi|149927159|ref|ZP_01915416.1| prolyl-tRNA synthetase [Limnobacter sp. MED105]
 gi|149824098|gb|EDM83319.1| prolyl-tRNA synthetase [Limnobacter sp. MED105]
          Length = 586

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 59/124 (47%), Gaps = 9/124 (7%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P V    LWQ+SG W+ Y   +  +K   D     R + + P +      V    +
Sbjct: 68  ELLMPAVQPAELWQESGRWEKYGPELLRMKDRHD-----RDYVIGPTHEEVITDVVRKEV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
           KSYR+LP+ L +  + +R+E      G+MR R F   DA+ F   ++     LK ++++ 
Sbjct: 123 KSYRQLPLNLYQIQTKFRDEIRPRF-GVMRGREFVMKDAYSFDRTQEA---ALKTYDVMY 178

Query: 413 SIYK 416
             Y+
Sbjct: 179 DAYR 182


>gi|209885076|ref|YP_002288933.1| prolyl-tRNA synthetase [Oligotropha carboxidovorans OM5]
 gi|226701315|sp|B6JH58|SYP_OLICO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|209873272|gb|ACI93068.1| prolyl-tRNA synthetase [Oligotropha carboxidovorans OM5]
          Length = 441

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 91/204 (44%), Gaps = 18/204 (8%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTP 297
           +E+E   HR + R   L    ++ +G+  W   G+++ + +   +R  + +    E+  P
Sbjct: 16  KEAEIASHRLMLRAGML---RQEAAGIYAWLPLGFRVLKKIERIVREEQNRAGAIELLMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW++SG +D+Y   M  ++ AD   +  R     P N      +F   +KSYR 
Sbjct: 73  TLQLADLWRESGRYDAYGPEM--LRIAD---RHKRELLYGPTNEEMITEIFRSYVKSYRN 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+ L      +R+E      G+MR R F   DA+ F   E      L  + + ++  + 
Sbjct: 128 LPLNLYHIQWKFRDEQRPRF-GVMRGREFLMKDAYSFDLDEAAAR--LSYNKMFVAYLRT 184

Query: 418 F---GFEKIMVKLSTRPEKRVGSD 438
           F   G + I ++  T P   +G D
Sbjct: 185 FARMGLKAIPMRAETGP---IGGD 205


>gi|332286931|ref|YP_004418842.1| prolyl-tRNA synthetase [Pusillimonas sp. T7-7]
 gi|330430884|gb|AEC22218.1| prolyl-tRNA synthetase [Pusillimonas sp. T7-7]
          Length = 577

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 73/156 (46%), Gaps = 10/156 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQ 298
           E+E + H+ + R      I +   G+  +   G K+ + + + +R+++      E+  P 
Sbjct: 17  EAEVKSHQLMTRA---GMIRKAAGGIYTYMPLGLKVLRKIENIVRQEMDQAGAIELLMPV 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    LW +SG W+ Y A +  +K      +  R F L+P +      +  + + S+R+L
Sbjct: 74  VQPAELWVESGRWEQYGAELLRIKD-----RHQRDFVLQPTSEEVITDIARNEIHSWRQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           P+      + +R+E      GLMR R FT  DA+ F
Sbjct: 129 PLNFYHIQTKFRDERRPRF-GLMRGREFTMKDAYSF 163


>gi|209364247|ref|YP_001425332.2| prolyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
 gi|207082180|gb|ABS76694.2| prolyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
          Length = 566

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 63/139 (45%), Gaps = 7/139 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ Q +   +R ++ +    E+  P V    LWQ+SG W++Y A +  
Sbjct: 38  ASGLYTWLPLGLRVLQKVADVVREEMNRAGALELLMPIVQPASLWQESGRWEAYGAELLR 97

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +       +    F   P +      +    LKSY++LP+   +  + +R+E      G+
Sbjct: 98  I-----MDRHQNGFCFGPTHEEVITDIARQELKSYKQLPLNFYQIQTKFRDEIRPRF-GV 151

Query: 381 MRVRGFTQDDAHVFCTKEQ 399
           MR R F   DA+ F   E+
Sbjct: 152 MRSREFLMKDAYSFDLDEK 170


>gi|50122450|ref|YP_051617.1| prolyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
 gi|81827028|sp|Q6D1B9|SYP_ERWCT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|49612976|emb|CAG76427.1| prolyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
          Length = 572

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 35/139 (25%), Positives = 66/139 (47%), Gaps = 7/139 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E++ P V    LW +SG WD Y   +  
Sbjct: 36  ASGLYTWLPTGLRVLRKVENIVREEMNNAGAIEVSMPVVQPADLWVESGRWDQYGPELL- 94

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +  D   +  R F L P +      +  + + SY++LP+   +  + +R+E      G+
Sbjct: 95  -RFVD---RGERPFVLGPTHEEVITDLIRNEVSSYKQLPLNFFQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQ 399
           MR R F   DA+ F T ++
Sbjct: 150 MRSREFLMKDAYSFHTSQE 168


>gi|256830944|ref|YP_003159672.1| alanyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
 gi|256580120|gb|ACU91256.1| alanyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
          Length = 879

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 69/154 (44%), Gaps = 20/154 (12%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSD 117
           +E+   E  R      HS  H++  A++ +  E V+ A   +      +DF      S +
Sbjct: 553 VELFVEEGERIATARNHSTTHLLHAALRRVLGEHVKQAGSLVGPSRLRFDFTHISGLSPE 612

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHE------KARELFESKKEAYKVEILESIPAKENV 171
           EL Q+E ++   I  D+P + Q +S++      +A  LF  K EA  V ++E        
Sbjct: 613 ELRQVEDEVNRAILADAPIVTQVMSYDAAVQQKQAMALFGEKYEA-DVRVVE-------- 663

Query: 172 TLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAG 205
                GE  +LC G H+ STGQ    F L+  AG
Sbjct: 664 ---MAGESVELCGGTHLASTGQAGS-FALLSEAG 693


>gi|222055493|ref|YP_002537855.1| prolyl-tRNA synthetase [Geobacter sp. FRC-32]
 gi|254782902|sp|B9LZK1|SYP_GEOSF RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|221564782|gb|ACM20754.1| prolyl-tRNA synthetase [Geobacter sp. FRC-32]
          Length = 570

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 49/107 (45%), Gaps = 6/107 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P V    LWQ+SG W+ Y   +   +   DT      F L P +      +    +
Sbjct: 68  ELLMPTVQPAELWQESGRWEQYGKELLRFRDRKDT-----EFCLGPTHEEVITDLVRREV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQ 399
           KSYR+LP+ L +    +R+E      GLMR R F   DA+ F   E+
Sbjct: 123 KSYRQLPINLYQIQGKFRDEIRPRF-GLMRGREFIMKDAYSFDVDEK 168


>gi|212213390|ref|YP_002304326.1| prolyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
 gi|212011800|gb|ACJ19181.1| prolyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
          Length = 566

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 63/139 (45%), Gaps = 7/139 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ Q +   +R ++ +    E+  P V    LWQ+SG W++Y A +  
Sbjct: 38  ASGLYTWLPLGLRVLQKVADVVREEMNRAGALELLMPIVQPASLWQESGRWEAYGAELLR 97

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +       +    F   P +      +    LKSY++LP+   +  + +R+E      G+
Sbjct: 98  I-----MDRHQNGFCFGPTHEEVITDIARQELKSYKQLPLNFYQIQTKFRDEIRPRF-GV 151

Query: 381 MRVRGFTQDDAHVFCTKEQ 399
           MR R F   DA+ F   E+
Sbjct: 152 MRSREFLMKDAYSFDLDEK 170


>gi|29653442|ref|NP_819134.1| prolyl-tRNA synthetase [Coxiella burnetii RSA 493]
 gi|81839111|sp|Q83F67|SYP_COXBU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|29540704|gb|AAO89648.1| prolyl-tRNA synthetase [Coxiella burnetii RSA 493]
          Length = 566

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 63/139 (45%), Gaps = 7/139 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ Q +   +R ++ +    E+  P V    LWQ+SG W++Y A +  
Sbjct: 38  ASGLYTWLPLGLRVLQKVADVVREEMNRAGALELLMPIVQPASLWQESGRWEAYGAELLR 97

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +       +    F   P +      +    LKSY++LP+   +  + +R+E      G+
Sbjct: 98  I-----MDRHQNGFCFGPTHEEVITDIARQELKSYKQLPLNFYQIQTKFRDEIRPRF-GV 151

Query: 381 MRVRGFTQDDAHVFCTKEQ 399
           MR R F   DA+ F   E+
Sbjct: 152 MRSREFLMKDAYSFDLDEK 170


>gi|330975337|gb|EGH75403.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. aptata str. DSM
           50252]
          Length = 571

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 64/133 (48%), Gaps = 7/133 (5%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG+  W   G ++ + + + +R ++      EI  P +    LWQ+SG W+ Y   +  +
Sbjct: 37  SGLYTWLPMGLRVLRKVEAIVREEMDAAGALEILMPGIQPAELWQESGRWEQYGPEL--M 94

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           +  D   +  R F L P +      +  + L SY++LP+ L +  + +R+E      GLM
Sbjct: 95  RLVD---RHNREFCLGPTHEEVITDLARNELNSYKQLPINLYQIQTKFRDEIRPRF-GLM 150

Query: 382 RVRGFTQDDAHVF 394
           R R F   DA+ F
Sbjct: 151 RGREFVMKDAYSF 163


>gi|330950620|gb|EGH50880.1| prolyl-tRNA synthetase [Pseudomonas syringae Cit 7]
          Length = 571

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 64/133 (48%), Gaps = 7/133 (5%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG+  W   G ++ + + + +R ++      EI  P +    LWQ+SG W+ Y   +  +
Sbjct: 37  SGLYTWLPMGLRVLRKVEAIVREEMDAAGALEILMPGIQPAELWQESGRWEQYGPEL--M 94

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           +  D   +  R F L P +      +  + L SY++LP+ L +  + +R+E      GLM
Sbjct: 95  RLVD---RHNREFCLGPTHEEVITDLARNELNSYKQLPINLYQIQTKFRDEIRPRF-GLM 150

Query: 382 RVRGFTQDDAHVF 394
           R R F   DA+ F
Sbjct: 151 RGREFVMKDAYSF 163


>gi|212219440|ref|YP_002306227.1| prolyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
 gi|212013702|gb|ACJ21082.1| prolyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
          Length = 566

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 63/139 (45%), Gaps = 7/139 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ Q +   +R ++ +    E+  P V    LWQ+SG W++Y A +  
Sbjct: 38  ASGLYTWLPLGLRVLQKVADVVREEMNRAGALELLMPIVQPASLWQESGRWEAYGAELLR 97

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +       +    F   P +      +    LKSY++LP+   +  + +R+E      G+
Sbjct: 98  I-----MDRHQNGFCFGPTHEEVITDIARQELKSYKQLPLNFYQIQTKFRDEIRPRF-GV 151

Query: 381 MRVRGFTQDDAHVFCTKEQ 399
           MR R F   DA+ F   E+
Sbjct: 152 MRSREFLMKDAYSFDLDEK 170


>gi|189083494|sp|A9KGU5|SYP_COXBN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
          Length = 564

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 63/139 (45%), Gaps = 7/139 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ Q +   +R ++ +    E+  P V    LWQ+SG W++Y A +  
Sbjct: 36  ASGLYTWLPLGLRVLQKVADVVREEMNRAGALELLMPIVQPASLWQESGRWEAYGAELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +       +    F   P +      +    LKSY++LP+   +  + +R+E      G+
Sbjct: 96  I-----MDRHQNGFCFGPTHEEVITDIARQELKSYKQLPLNFYQIQTKFRDEIRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQ 399
           MR R F   DA+ F   E+
Sbjct: 150 MRSREFLMKDAYSFDLDEK 168


>gi|237738009|ref|ZP_04568490.1| prolyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
 gi|229419889|gb|EEO34936.1| prolyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
          Length = 569

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 80/167 (47%), Gaps = 11/167 (6%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
           +E+E   H+ L R      I +  SGV  +   G K  + + + +RR++ +   +EI  P
Sbjct: 16  KEAEIASHKLLLRAG---MIKKLTSGVYTYLPLGLKALKKVENIVRREMDRAGAQEIFMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW++SG W+     M  ++   D  K  R F L P +      V  + + SY++
Sbjct: 73  VLQPAELWKESGRWEVMGPLMMKLQ---DRAK--RDFVLGPTHEEVVTDVIRNDVASYKQ 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNE 403
           LP+ L +  + +R+E      GLMR R F   DA+ F  T+E +  E
Sbjct: 128 LPLNLYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSFHATRESLDEE 173


>gi|229168558|ref|ZP_04296281.1| Prolyl-tRNA synthetase [Bacillus cereus AH621]
 gi|228614964|gb|EEK72066.1| Prolyl-tRNA synthetase [Bacillus cereus AH621]
          Length = 566

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 79/166 (47%), Gaps = 10/166 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R ++ +    E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K      ++ R FAL   +      +    +KSY++L
Sbjct: 74  MQASELWQESGRWYSYGSELMRMKD-----RNAREFALGATHEEVITDLVRDEIKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           P+ L +  + +R+E      GL+R R F   DA+ F   ++  +E 
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEV 173


>gi|210623497|ref|ZP_03293842.1| hypothetical protein CLOHIR_01792 [Clostridium hiranonis DSM 13275]
 gi|210153555|gb|EEA84561.1| hypothetical protein CLOHIR_01792 [Clostridium hiranonis DSM 13275]
          Length = 563

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 48/197 (24%), Positives = 84/197 (42%), Gaps = 14/197 (7%)

Query: 38  AVAVAINGK-VCDLSDPVREGS-IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVA 95
            V  AI GK +CDL + V  G  +E++   +     V     + +   A + ++ +V+V 
Sbjct: 49  VVTAAIKGKSICDLYEKVYNGEEVELLDFYNEDGARVYFRGLSFVFITACRKLYEKVEVT 108

Query: 96  IGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKE 155
           +   + +G YY  D  +  +  ++  I+ KM+ I+A D P  K  +    A ++F     
Sbjct: 109 VEHSLSNGVYYSMDIGRELTDKDIEDIKNKMRNIVAEDCPIKKVVMDKLDAGQIFRILSR 168

Query: 156 AYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDS--- 212
             K E++E+   +EN  +Y    + D   G    ST  +  F  +    G    G S   
Sbjct: 169 EDKAELIEN-KDEENAKIYVCEGYIDHFYGMMPPSTKYMDVFDVVKYKKGVVLMGPSEDD 227

Query: 213 --------NRPMLSRIY 221
                   ++P LS IY
Sbjct: 228 ALVPEKFIDQPKLSNIY 244


>gi|319898898|ref|YP_004158991.1| Prolyl-tRNA synthetase [Bartonella clarridgeiae 73]
 gi|319402862|emb|CBI76413.1| Prolyl-tRNA synthetase [Bartonella clarridgeiae 73]
          Length = 442

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 47/198 (23%), Positives = 82/198 (41%), Gaps = 17/198 (8%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTP 297
           +E+E   HR + R      + +  SG+  W   G K+   +   +R  + +    EI  P
Sbjct: 16  KEAEVVSHRFMLRAG---MVRQQTSGIYSWLPLGKKVLDKICKIIREEQERAGAVEILMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW++SG ++ Y   M  +K   D     R     P N      +F   ++SY++
Sbjct: 73  TIQSADLWRESGRYNDYGLEMLRIKDRQD-----RDLLYGPTNEEMITDIFRSYVRSYKD 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF----CTKEQMFNECLKIHNLIIS 413
           LP+ L      +R+E      G+MR R F   DA+ F     + +  +N     +   + 
Sbjct: 128 LPLNLYHIQWKFRDEIRPRF-GVMRAREFLMKDAYSFDLDYASAKTSYNRMFVAY---LR 183

Query: 414 IYKDFGFEKIMVKLSTRP 431
            +   G + I V+  T P
Sbjct: 184 TFSRIGLKAIPVRADTGP 201


>gi|261822741|ref|YP_003260847.1| prolyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
 gi|261606754|gb|ACX89240.1| prolyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
          Length = 572

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 35/139 (25%), Positives = 66/139 (47%), Gaps = 7/139 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E++ P V    LW +SG WD Y   +  
Sbjct: 36  ASGLYTWLPTGLRVLRKVENIVREEMNNAGAIEVSMPVVQPADLWVESGRWDQYGPELL- 94

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +  D   +  R F L P +      +  + + SY++LP+   +  + +R+E      G+
Sbjct: 95  -RFVD---RGERPFVLGPTHEEVITDLIRNEVSSYKQLPLNFFQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQ 399
           MR R F   DA+ F T ++
Sbjct: 150 MRSREFLMKDAYSFHTSQE 168


>gi|253689709|ref|YP_003018899.1| prolyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|259511609|sp|C6DDF6|SYP_PECCP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|251756287|gb|ACT14363.1| prolyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 572

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 35/139 (25%), Positives = 66/139 (47%), Gaps = 7/139 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E++ P V    LW +SG WD Y   +  
Sbjct: 36  ASGLYTWLPTGLRVLRKVENIVREEMNNAGAIEVSMPVVQPADLWVESGRWDQYGPELL- 94

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +  D   +  R F L P +      +  + + SY++LP+   +  + +R+E      G+
Sbjct: 95  -RFVD---RGERPFVLGPTHEEVITDLIRNEISSYKQLPLNFFQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQ 399
           MR R F   DA+ F T ++
Sbjct: 150 MRSREFLMKDAYSFHTSQE 168


>gi|251797797|ref|YP_003012528.1| prolyl-tRNA synthetase [Paenibacillus sp. JDR-2]
 gi|247545423|gb|ACT02442.1| prolyl-tRNA synthetase [Paenibacillus sp. JDR-2]
          Length = 571

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 77/165 (46%), Gaps = 10/165 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E   H+ + R   +  +A   +G+  +   G  + + L   +R ++ +   +E+  P 
Sbjct: 17  EAEAVSHQLMLRAGLIRQLA---AGIYTYLPAGRLVLRKLEKIIREEMDNAGCQEVFMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW+QSG ++ Y   +  +K   D     R FAL P +      +    + SYR+L
Sbjct: 74  MQPADLWRQSGRYEKYGPELVRLKDRHD-----REFALGPTHEEVITDLVRGEVNSYRQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE 403
           PV L +  + +R+E     +GL+R R F   DA+ F    +  NE
Sbjct: 129 PVTLYQIQTKFRDEKR-PRYGLLRGREFMMKDAYSFDADWEGLNE 172


>gi|163941557|ref|YP_001646441.1| prolyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|226731430|sp|A9VT57|SYP_BACWK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|163863754|gb|ABY44813.1| prolyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
          Length = 566

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 79/166 (47%), Gaps = 10/166 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R ++ +    E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K      ++ R FAL   +      +    +KSY++L
Sbjct: 74  MQASELWQESGRWYSYGSELMRMKD-----RNAREFALGATHEEVITDLVRDEIKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           P+ L +  + +R+E      GL+R R F   DA+ F   ++  +E 
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEV 173


>gi|238026159|ref|YP_002910390.1| prolyl-tRNA synthetase [Burkholderia glumae BGR1]
 gi|237875353|gb|ACR27686.1| Prolyl-tRNA synthetase [Burkholderia glumae BGR1]
          Length = 578

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 58/130 (44%), Gaps = 7/130 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P V    LWQ+SG W+ Y   +   K   D       F + P +      +  + +
Sbjct: 68  ELLMPAVQPAELWQESGRWEQYGPELLRFKDRKDN-----DFVIGPTHEEVVTDIARNQI 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLI 411
           KSYR++PV   +  + +R+E      G+MR R F   DA+ F   +    E   K+++  
Sbjct: 123 KSYRQMPVNFYQIQTKFRDEIRPRF-GVMRGREFIMKDAYSFDKDQAGLKESYRKMYDAY 181

Query: 412 ISIYKDFGFE 421
           + ++   G E
Sbjct: 182 VRVFTRIGLE 191


>gi|229061422|ref|ZP_04198767.1| Prolyl-tRNA synthetase [Bacillus cereus AH603]
 gi|228717845|gb|EEL69493.1| Prolyl-tRNA synthetase [Bacillus cereus AH603]
          Length = 566

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 79/166 (47%), Gaps = 10/166 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R ++ +    E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K      ++ R FAL   +      +    +KSY++L
Sbjct: 74  MQASELWQESGRWYSYGSELMRMKD-----RNAREFALGATHEEVITDLVRDEIKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           P+ L +  + +R+E      GL+R R F   DA+ F   ++  +E 
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEV 173


>gi|229134626|ref|ZP_04263436.1| Prolyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
 gi|228648887|gb|EEL04912.1| Prolyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
          Length = 566

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 79/166 (47%), Gaps = 10/166 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R ++ +    E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K      ++ R FAL   +      +    +KSY++L
Sbjct: 74  MQASELWQESGRWYSYGSELMRMKD-----RNAREFALGATHEEVITDLVRDEIKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           P+ L +  + +R+E      GL+R R F   DA+ F   ++  +E 
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEV 173


>gi|227114059|ref|ZP_03827715.1| prolyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 572

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 35/139 (25%), Positives = 66/139 (47%), Gaps = 7/139 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E++ P V    LW +SG WD Y   +  
Sbjct: 36  ASGLYTWLPTGLRVLRKVENIVREEMNNAGAIEVSMPVVQPADLWVESGRWDQYGPELL- 94

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +  D   +  R F L P +      +  + + SY++LP+   +  + +R+E      G+
Sbjct: 95  -RFVD---RGERPFVLGPTHEEVITDLIRNEVSSYKQLPLNFFQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQ 399
           MR R F   DA+ F T ++
Sbjct: 150 MRSREFLMKDAYSFHTSQE 168


>gi|288801922|ref|ZP_06407364.1| phosphoribulokinase family protein [Prevotella melaninogenica D18]
 gi|288335964|gb|EFC74397.1| phosphoribulokinase family protein [Prevotella melaninogenica D18]
          Length = 555

 Score = 53.9 bits (128), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 41/181 (22%), Positives = 81/181 (44%), Gaps = 2/181 (1%)

Query: 18  PVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPEDPRSLAVIRHS 76
           P+ +T SD+ E I+  +    V+  +N KV  L   V     +E +    P  +     S
Sbjct: 21  PIGSTLSDIYEEINLQMPYGPVSAKVNNKVEGLHYRVYHNKDVEFLDLLTPSGIRTYTRS 80

Query: 77  CAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPF 136
              ++ +AV  ++   QV I   + +G+Y +       +++++ +I  +MQEII    P 
Sbjct: 81  LFLVLCKAVHDLYTGSQVVIDIPVSNGYYCNLQLGHEITTEDVDRIRTRMQEIIDAKMPI 140

Query: 137 LKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKK 196
            +   + E+A ++F    +  K ++L+S         Y   ++ D   G  + +T Q+  
Sbjct: 141 QRYETTTEEAVKMFTELGDIQKAKLLKS-SGSLYCVYYVLEDYKDYYYGSMLTNTSQLHL 199

Query: 197 F 197
           F
Sbjct: 200 F 200


>gi|229013002|ref|ZP_04170167.1| Prolyl-tRNA synthetase [Bacillus mycoides DSM 2048]
 gi|228748256|gb|EEL98116.1| Prolyl-tRNA synthetase [Bacillus mycoides DSM 2048]
          Length = 566

 Score = 53.9 bits (128), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 79/166 (47%), Gaps = 10/166 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R ++ +    E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K      ++ R FAL   +      +    +KSY++L
Sbjct: 74  MQASELWQESGRWYSYGSELMRMKD-----RNAREFALGATHEEVITDLVRDEIKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           P+ L +  + +R+E      GL+R R F   DA+ F   ++  +E 
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEV 173


>gi|328947373|ref|YP_004364710.1| alanyl-tRNA synthetase [Treponema succinifaciens DSM 2489]
 gi|328447697|gb|AEB13413.1| alanyl-tRNA synthetase [Treponema succinifaciens DSM 2489]
          Length = 605

 Score = 53.9 bits (128), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 87/204 (42%), Gaps = 41/204 (20%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIEIITP 64
           ++LT   G+   F V   G   AE   +  +K   A A  G + + SD   +        
Sbjct: 405 LELTQELGAENGFTVDVEGFKEAERKHQEASKTQDAGAAKGGLAEQSDTTTK-------- 456

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDELAQIE 123
                     H+  H++ +A+ ++  +     G  I  +   +DF  ++P + +E+ ++E
Sbjct: 457 ---------YHTATHLLQQALVNVLGDKVAQKGSNITNERMRFDFTFDRPMTKEEIQKVE 507

Query: 124 KKMQEIIARDSPFLKQYLSHEK-----ARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
             + E I +D P   + +  EK     AR LF +K               E+V +Y  GE
Sbjct: 508 DIVNEQIKKDLPVTMEVMPLEKATAEGARALFTNK-------------YGEDVKVYTIGE 554

Query: 179 ---WF--DLCRGPHVRSTGQVKKF 197
              WF  ++C GPHV+ T Q+ +F
Sbjct: 555 KDNWFSKEVCGGPHVQHTAQIGEF 578


>gi|313891198|ref|ZP_07824817.1| proline--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026]
 gi|313120561|gb|EFR43681.1| proline--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026]
          Length = 617

 Score = 53.9 bits (128), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +L   LW++SG +++Y  +++ +K  + +      F L P +      +    +
Sbjct: 68  EMLAPALLTADLWRESGRYETYGEDLYKLKNRESS-----DFILGPTHEETFTTLIRDAV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +  + YR+E     +GL+R R F   D + F
Sbjct: 123 KSYKQLPLNLYQIQAKYRDEKR-PRNGLLRTREFIMKDGYSF 163


>gi|164685792|ref|ZP_01945930.2| prolyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
 gi|165918393|ref|ZP_02218479.1| prolyl-tRNA synthetase [Coxiella burnetii RSA 334]
 gi|164601306|gb|EAX33436.2| prolyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
 gi|165917899|gb|EDR36503.1| prolyl-tRNA synthetase [Coxiella burnetii RSA 334]
          Length = 564

 Score = 53.9 bits (128), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 63/139 (45%), Gaps = 7/139 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ Q +   +R ++ +    E+  P V    LWQ+SG W++Y A +  
Sbjct: 36  ASGLYTWLPLGLRVLQKVADVVREEMNRAGALELLMPIVQPASLWQESGRWEAYGAELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +       +    F   P +      +    LKSY++LP+   +  + +R+E      G+
Sbjct: 96  I-----MDRHQNGFCFGPTHEEVITDIARQELKSYKQLPLNFYQIQTKFRDEIRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQ 399
           MR R F   DA+ F   E+
Sbjct: 150 MRSREFLMKDAYSFDLDEK 168


>gi|323142328|ref|ZP_08077160.1| proline--tRNA ligase [Phascolarctobacterium sp. YIT 12067]
 gi|322413212|gb|EFY04099.1| proline--tRNA ligase [Phascolarctobacterium sp. YIT 12067]
          Length = 569

 Score = 53.9 bits (128), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 33/133 (24%), Positives = 64/133 (48%), Gaps = 7/133 (5%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           +G+  +    W++ + + + +R ++     +EI  P +    +W++SG WD+Y A M  +
Sbjct: 37  NGMYTYLPLAWRVIKKIENIIREEMDHAGCQEIMMPIMQPAEIWKESGRWDAYGAEMVRL 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           K      +    + L P +      +  + ++SYR+LP+ L +    +R+E      GLM
Sbjct: 97  K-----DRHGHEYCLGPTHEEMVTTLVKNDVRSYRQLPLNLYQIQDKFRDERRPRF-GLM 150

Query: 382 RVRGFTQDDAHVF 394
           R R F   D + F
Sbjct: 151 RSRDFIMKDGYSF 163


>gi|161829880|ref|YP_001596051.1| prolyl-tRNA synthetase [Coxiella burnetii RSA 331]
 gi|189083495|sp|A9N9Z2|SYP_COXBR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|161761747|gb|ABX77389.1| prolyl-tRNA synthetase [Coxiella burnetii RSA 331]
          Length = 564

 Score = 53.9 bits (128), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 63/139 (45%), Gaps = 7/139 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ Q +   +R ++ +    E+  P V    LWQ+SG W++Y A +  
Sbjct: 36  ASGLYTWLPLGLRVLQKVADVVREEMNRAGALELLMPIVQPASLWQESGRWEAYGAELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +       +    F   P +      +    LKSY++LP+   +  + +R+E      G+
Sbjct: 96  I-----MDRHQNGFCFGPTHEEVITDIARQELKSYKQLPLNFYQIQTKFRDEIRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQ 399
           MR R F   DA+ F   E+
Sbjct: 150 MRSREFLMKDAYSFDLDEK 168


>gi|45185919|ref|NP_983635.1| ACR233Wp [Ashbya gossypii ATCC 10895]
 gi|44981709|gb|AAS51459.1| ACR233Wp [Ashbya gossypii ATCC 10895]
          Length = 562

 Score = 53.9 bits (128), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 86/170 (50%), Gaps = 19/170 (11%)

Query: 255 LFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDS 313
           L +I +  SG++ W   G +  + + + +R+++ +   +E+    +  + LWQ++G W++
Sbjct: 39  LGYIRQSQSGLVHWLPLGLRCLRNVENIVRKRMDECGGQELQLSTLSPETLWQRTGRWEN 98

Query: 314 YRANMFAVKCADDTIKDLRTFALKPMNCPGHVA-VFNHGLKSYRELPVRLAEFGSVYRNE 372
               +F ++ A       R + L    C   V  + +  L+SY++LP  + + G+ YR+E
Sbjct: 99  --KELFKLRDAKG-----RNYCLSA-TCEEDVTWLMSECLESYKDLPSLVYQIGTKYRDE 150

Query: 373 --PSGSLHGLMRVRGFTQDDAHVFCTKE----QMFNECLKIHNLIISIYK 416
             P G   GL+R R F   DA+ F        QMF++  ++++ I +  K
Sbjct: 151 LRPRG---GLLRSREFLMKDAYSFHADSQDAMQMFHKMKQVYDQIFTDLK 197


>gi|114566427|ref|YP_753581.1| prolyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|122318501|sp|Q0AYJ4|SYP_SYNWW RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|114337362|gb|ABI68210.1| prolyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 570

 Score = 53.9 bits (128), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 76/161 (47%), Gaps = 10/161 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+E   H+ L R      I +  +GV  +     ++ + +++ +R ++ +   +E+  P 
Sbjct: 17  EAEVLSHQLLLRAG---FIRKATAGVYSYLPLANRVLKKIMNIVREEMDRAGGQEVILPI 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW++SG W+ Y   MF +K   +     R FAL P +      + +  + SYR L
Sbjct: 74  IQPAELWKKSGRWEVYGDEMFRLKDRHN-----RDFALGPTHEEIITTLVDADVHSYRHL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQ 399
           P+ L +  + YR+E      GLMR R F   D + F   E+
Sbjct: 129 PLLLYQIQNKYRDEIRPRF-GLMRGREFIMKDLYSFDIDEE 168


>gi|312880609|ref|ZP_07740409.1| phosphoribulokinase/uridine kinase [Aminomonas paucivorans DSM
           12260]
 gi|310783900|gb|EFQ24298.1| phosphoribulokinase/uridine kinase [Aminomonas paucivorans DSM
           12260]
          Length = 547

 Score = 53.9 bits (128), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 44/177 (24%), Positives = 82/177 (46%), Gaps = 4/177 (2%)

Query: 22  TGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPEDPRSLAVIRHSCAHI 80
           TGS+V        A   VA  +N  +  L   V E  S+E +       + V R + + +
Sbjct: 20  TGSEVLSLSGYGGANNVVAWRVNRNLRPLGWVVDEDASVEFVDTGSFEGMEVYRRTLSFL 79

Query: 81  MAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQY 140
           + +A + +  +  V I   + DG+Y +     P + +++  I++ M  ++ ++ P  ++ 
Sbjct: 80  LVQASKKVLGQ-DVTIRHSMSDGYYCELSG-GPATEEQVGAIKQGMAHLVDQNIPIHREV 137

Query: 141 LSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
           L  +KAR +FE +    K  +L+   A +   +YR  + +     P   STGQVK F
Sbjct: 138 LPLDKARRIFERQGNYDKARLLQWT-ALDPTVVYRCADTYGYFYAPLASSTGQVKVF 193


>gi|227327749|ref|ZP_03831773.1| prolyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 572

 Score = 53.9 bits (128), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 35/139 (25%), Positives = 66/139 (47%), Gaps = 7/139 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E++ P V    LW +SG WD Y   +  
Sbjct: 36  ASGLYTWLPTGLRVLRKVENIVREEMNNAGAIEVSMPVVQPADLWVESGRWDQYGPELL- 94

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +  D   +  R F L P +      +  + + SY++LP+   +  + +R+E      G+
Sbjct: 95  -RFVD---RGERPFVLGPTHEEVITDLIRNEVSSYKQLPLNFFQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQ 399
           MR R F   DA+ F T ++
Sbjct: 150 MRSREFLMKDAYSFHTSQE 168


>gi|318056620|ref|ZP_07975343.1| prolyl-tRNA synthetase [Streptomyces sp. SA3_actG]
 gi|318080757|ref|ZP_07988089.1| prolyl-tRNA synthetase [Streptomyces sp. SA3_actF]
          Length = 563

 Score = 53.9 bits (128), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 79/174 (45%), Gaps = 18/174 (10%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R     ++    +G+  W   G K+   +   +R ++     +E+  P 
Sbjct: 21  DAETLSHKLLVRA---GYVRRTAAGIWSWLPLGKKVLDNISQIVREEMDAIGAQEVLLPA 77

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L +  ++ SG W+ Y   +F +K  D    D        +  P H  +F   +K    S
Sbjct: 78  LLPREPYEASGRWEEYGDLLFRLK--DRKGADY-------LLGPTHEEIFTQVVKDQCTS 128

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
           Y++LPV L +  + YR+E +    G++R R F   D++ F T E+   E   +H
Sbjct: 129 YKDLPVMLYQVQTKYRDE-ARPRSGVLRGREFVMKDSYSFDTTEEGLAESYALH 181


>gi|222152444|ref|YP_002561619.1| prolyl-tRNA synthetase [Streptococcus uberis 0140J]
 gi|254782919|sp|B9DTD1|SYP_STRU0 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|222113255|emb|CAR40772.1| prolyl-tRNA synthetase [Streptococcus uberis 0140J]
          Length = 618

 Score = 53.9 bits (128), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 33/139 (23%), Positives = 69/139 (49%), Gaps = 7/139 (5%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYR 315
           ++ +  +G+  +     +  + L + MR++  K    E+  P +L   LW++SG +++Y 
Sbjct: 31  YVRQVSAGIYAYLPLANRTIEKLKTIMRQEFDKIGAVEMLAPALLTADLWRESGRYETYG 90

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            +++ +K  + +      F L P +      +    +KSY++LP+ L +  + YR+E   
Sbjct: 91  DDLYKLKNRESS-----DFILGPTHEETFTTLVRDAVKSYKQLPLNLYQIQAKYRDEKR- 144

Query: 376 SLHGLMRVRGFTQDDAHVF 394
             +GL+R R F   D + F
Sbjct: 145 PRNGLLRTREFIMKDGYSF 163


>gi|254496505|ref|ZP_05109377.1| prolyl-tRNA synthase [Legionella drancourtii LLAP12]
 gi|254354272|gb|EET12935.1| prolyl-tRNA synthase [Legionella drancourtii LLAP12]
          Length = 577

 Score = 53.9 bits (128), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 39/170 (22%), Positives = 77/170 (45%), Gaps = 8/170 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           GSG+  W   G K+ + +   +R ++ + +  E+  P V    LWQ++G W+++   +  
Sbjct: 44  GSGLYTWMPLGLKVLRKVEHIVREEMNRINSVELLMPAVQPAELWQETGRWETFGGQLLT 103

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +K ++      R +   P +      +  + L+SY++LP    +  + +R+E      G+
Sbjct: 104 MKDSNG-----REYCYGPTHEEVITDIMRNELQSYKQLPRCFYQIQTKFRDEIRPRF-GV 157

Query: 381 MRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
           MR R F   DA+ F    E + N    ++     I+   G +   V+  T
Sbjct: 158 MRAREFIMKDAYSFHLNLESLQNTYKDMYQAYCRIFDRMGLKYRAVEADT 207


>gi|320335266|ref|YP_004171977.1| prolyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
 gi|319756555|gb|ADV68312.1| prolyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
          Length = 504

 Score = 53.9 bits (128), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 49/103 (47%), Gaps = 9/103 (8%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           +E+  P +    LW  SG WD+YRA       AD   +  R   L P +    VA    G
Sbjct: 67  QEVRLPMLQPAALWAASGRWDAYRAEGLMFSLAD---RAGRALTLAPTHEEA-VAFLARG 122

Query: 352 LKSYRELPVRLAEFGSVYRNE--PSGSLHGLMRVRGFTQDDAH 392
           L+   +LP  + + G  +R+E  P G   GL+R R FT  DA+
Sbjct: 123 LRREADLPKVVYQVGRKFRDELRPRG---GLLRAREFTMKDAY 162


>gi|197105248|ref|YP_002130625.1| prolyl-tRNA synthetase [Phenylobacterium zucineum HLK1]
 gi|226701316|sp|B4RBZ9|SYP_PHEZH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|196478668|gb|ACG78196.1| prolyl-tRNA synthetase [Phenylobacterium zucineum HLK1]
          Length = 439

 Score = 53.9 bits (128), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 44/183 (24%), Positives = 78/183 (42%), Gaps = 11/183 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I ++ +G+  W   G K+ + +   +R ++ +    E+  P +    LW++SG +D Y  
Sbjct: 32  IRQEAAGIYAWLPLGLKVLKKIEQVVREEMDRAGAIEVLMPTLQLADLWRESGRYDDYGE 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  +K      +  R     P        +F   +KSY++LP  L      +R+E    
Sbjct: 92  EMLRIKD-----RHERDLLYGPTAEEVITDIFRAYIKSYKDLPKNLYNIQWKFRDERRPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
             G+MR R F   DA+ F   E        ++    +++Y   G + I V+  T P   +
Sbjct: 147 F-GVMRGREFLMKDAYSFDIDEAAARRAYNRMFCAYLNVYARLGLKAIPVRADTGP---I 202

Query: 436 GSD 438
           G D
Sbjct: 203 GGD 205


>gi|331006892|ref|ZP_08330140.1| Alanyl-tRNA synthetase [gamma proteobacterium IMCC1989]
 gi|330419292|gb|EGG93710.1| Alanyl-tRNA synthetase [gamma proteobacterium IMCC1989]
          Length = 877

 Score = 53.9 bits (128), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 62/135 (45%), Gaps = 11/135 (8%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEK 124
           D R   V+ HS  H+M  A++ I  E  V  G +++ +   +DF   Q  S DELA+IE 
Sbjct: 558 DVRQATVLNHSATHLMHAALRKILGEHVVQKGSLVDSEKLRFDFSHLQALSGDELARIET 617

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF--DL 182
            + + I  ++     +   E+A+        A    +L      + V +   G+ F  +L
Sbjct: 618 MVNDEIRHNTTVAVDHCDMEQAK--------AKGAMMLFDEKYGDEVRVLSMGDGFSIEL 669

Query: 183 CRGPHVRSTGQVKKF 197
           C G HV+ TG +  F
Sbjct: 670 CGGVHVQQTGDIGVF 684


>gi|326407711|gb|ADZ64782.1| prolyl-tRNA synthetase [Lactococcus lactis subsp. lactis CV56]
          Length = 616

 Score = 53.9 bits (128), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 31/149 (20%), Positives = 72/149 (48%), Gaps = 7/149 (4%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
           ++ +  +G+  +     ++ + L + MR +  +    E+  P +L   LW++SG +D+Y 
Sbjct: 31  YVRQVSAGIYAYLPLANRVLEKLKNIMREEFDEIGAVELLAPSLLTADLWRESGRYDTYG 90

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            +++ +K  D++      F L P +     ++    + SY++LP+ + +    +R+E   
Sbjct: 91  EDLYKLKNRDNS-----DFILGPTHEETMTSLVRDEITSYKKLPLNVYQIAPKFRDEKR- 144

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +GL+R R F   D + +   +   +E 
Sbjct: 145 PRYGLLRGREFLMKDGYSYHADQDSLDET 173


>gi|281492788|ref|YP_003354768.1| prolyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
 gi|281376440|gb|ADA65926.1| Prolyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
          Length = 616

 Score = 53.9 bits (128), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 31/149 (20%), Positives = 72/149 (48%), Gaps = 7/149 (4%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
           ++ +  +G+  +     ++ + L + MR +  +    E+  P +L   LW++SG +D+Y 
Sbjct: 31  YVRQVSAGIYAYLPLANRVLEKLKNIMREEFDEIGAVELLAPSLLTADLWRESGRYDTYG 90

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            +++ +K  D++      F L P +     ++    + SY++LP+ + +    +R+E   
Sbjct: 91  EDLYKLKNRDNS-----DFILGPTHEETMTSLVRDEITSYKKLPLNVYQIAPKFRDEKR- 144

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +GL+R R F   D + +   +   +E 
Sbjct: 145 PRYGLLRGREFLMKDGYSYHADQDSLDET 173


>gi|170758228|ref|YP_001785524.1| putative threonyl-tRNA synthetase/uridine kinase [Clostridium
           botulinum A3 str. Loch Maree]
 gi|169405217|gb|ACA53628.1| putative threonyl-tRNA synthetase/uridine kinase [Clostridium
           botulinum A3 str. Loch Maree]
          Length = 552

 Score = 53.9 bits (128), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 86/194 (44%), Gaps = 2/194 (1%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           +KL  P+GS        T  DV +          V   I+ +  +L+  V+ EG    + 
Sbjct: 4   LKLYMPNGSNILVSRDKTLYDVVKENKLEDNIPIVLGKIDEEYYELTSTVKKEGVFIPVD 63

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
             D   L     +   I  +AV  ++PE  V I   +  G Y +  K+   + +++ +I+
Sbjct: 64  ITDSIGLKTYVRTLQFIFIKAVLDLYPESTVVIEHSLGKGLYGEIHKKLSLNENDILKIK 123

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            KM EII +D    K  +  EKA E+FE  +   KV +L   P +E V LY     +D  
Sbjct: 124 NKMNEIINKDIKIKKISVKKEKAIEIFEEYRMKDKVRLLSHTPHEE-VKLYELDGRYDYF 182

Query: 184 RGPHVRSTGQVKKF 197
            GP   STG +K F
Sbjct: 183 YGPMAYSTGAIKNF 196


>gi|254468329|ref|ZP_05081735.1| prolyl-tRNA synthetase [beta proteobacterium KB13]
 gi|207087139|gb|EDZ64422.1| prolyl-tRNA synthetase [beta proteobacterium KB13]
          Length = 561

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/220 (21%), Positives = 93/220 (42%), Gaps = 24/220 (10%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
           +++E + H+ + R     ++    SG+  W   G ++ + + S +R ++      E+  P
Sbjct: 16  QDAELKSHQLMVRAG---YVKRLSSGLYTWMPIGLRVLRKIESIIREEMNASGAVELLMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LWQ++G W  +   M  +       +    F   P +      +    L SY++
Sbjct: 73  AIQPAELWQETGRWQQFGPQMLKIND-----RHQNEFCFGPTHEEVITDIARKELNSYKQ 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYK 416
           LP+   +  + +R+E      G+MR R F   DA+ F   E     CL K++ L+   Y 
Sbjct: 128 LPINFYQIQTKFRDEIRPRF-GVMRAREFLMKDAYSFHANEN----CLQKMYELMFETYN 182

Query: 417 DFGFEKIMVKLSTRPEKR--VGSDA------LWDDAENIM 448
              F +I ++  +       +G DA      L D  E+++
Sbjct: 183 RI-FSRIGLQFRSVAADSGAIGGDASHEFHVLADSGEDVI 221


>gi|307942137|ref|ZP_07657488.1| prolyl-tRNA synthetase [Roseibium sp. TrichSKD4]
 gi|307774423|gb|EFO33633.1| prolyl-tRNA synthetase [Roseibium sp. TrichSKD4]
          Length = 443

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 85/210 (40%), Gaps = 30/210 (14%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEE----- 293
           +E+E   HR + R      I +  +G+  W   G ++         RKI+   EE     
Sbjct: 16  KEAEIVSHRLMLRAG---MIRQQSAGIYSWLPMGHRVL--------RKIERIVEEEQNRA 64

Query: 294 ----INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
               +  P +    LW++SG +D+Y   M  +     T +  R     P N      +F 
Sbjct: 65  GAVQLLMPTIQSAELWRESGRYDAYGKEMLRI-----TDRHERDILFGPTNEEMITDIFR 119

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIH 408
             ++SY++LP+ L      +R+E      G+MR R F   DA+ F   KE       ++ 
Sbjct: 120 GYVRSYKDLPLNLYHIQWKFRDEVRPRF-GVMRGREFLMKDAYSFDLDKESAVESYNRMF 178

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSD 438
              +  YK  G   I +K  T P   +G D
Sbjct: 179 VAYLRTYKRMGLTAIPMKAETGP---IGGD 205


>gi|228909643|ref|ZP_04073466.1| Prolyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
 gi|228849932|gb|EEM94763.1| Prolyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
          Length = 566

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 81/170 (47%), Gaps = 13/170 (7%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R ++ +    E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K      ++ R FAL   +      +    +KSY++L
Sbjct: 74  MQAAELWQESGRWYSYGSELMRMKD-----RNAREFALGATHEEVITDLVRDEIKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE---CL 405
           P+ L +  + +R+E      GL+R R F   DA+ F   ++  +E   CL
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEVYDCL 177


>gi|172057852|ref|YP_001814312.1| prolyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
 gi|226701289|sp|B1YI68|SYP_EXIS2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|171990373|gb|ACB61295.1| prolyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
          Length = 566

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/164 (23%), Positives = 75/164 (45%), Gaps = 8/164 (4%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANM 318
           ++ +G+  +     ++   + + +R++++    +E+  P +    LW+++G WD Y   +
Sbjct: 34  QNAAGIYSYLPLAKRVLSKIETIIRQEMEGAGAQELLMPAIQPAELWEETGRWDIYGPEL 93

Query: 319 FAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLH 378
             +    D     R FAL   +     ++    L SY++LPV L +    YR+E      
Sbjct: 94  MRLTDRHD-----RRFALGATHEELITSIVRDELNSYKKLPVNLFQIQMKYRDERRPRF- 147

Query: 379 GLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFE 421
           GL+R R F   DA+ F  T+E +  E   + +    I+   G E
Sbjct: 148 GLLRGREFIMKDAYSFHSTQESLEEEYQNMFDAYTKIFTRVGLE 191


>gi|240850599|ref|YP_002971999.1| prolyl-tRNA synthetase [Bartonella grahamii as4aup]
 gi|240267722|gb|ACS51310.1| prolyl-tRNA synthetase [Bartonella grahamii as4aup]
          Length = 441

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 77/174 (44%), Gaps = 23/174 (13%)

Query: 231 LTQYLYFL-----EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
           L+QY   L     +E+E   HR + R      I +  SG+  W   G K+   +     R
Sbjct: 3   LSQYFLPLLKENPKEAEIVSHRLMLRAG---MIRQQTSGIYSWLPLGKKVLDKVC----R 55

Query: 286 KIKDDYE-----EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
            I+++ E     EI  P +    LW++SG +D Y   M  +K  D   +DL      P N
Sbjct: 56  IIREEQERAGAIEILMPTIQSADLWRESGRYDDYGLEMLRIK--DRQKRDL---LYGPTN 110

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
                 +F   ++SY++LP+ L      +R+E      G+MR R F   DA+ F
Sbjct: 111 EEMVTDIFRSYVRSYKDLPLNLYHIQWKFRDEIRPRF-GVMRAREFLMKDAYSF 163


>gi|229820980|ref|YP_002882506.1| prolyl-tRNA synthetase [Beutenbergia cavernae DSM 12333]
 gi|229566893|gb|ACQ80744.1| prolyl-tRNA synthetase [Beutenbergia cavernae DSM 12333]
          Length = 586

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/196 (24%), Positives = 86/196 (43%), Gaps = 19/196 (9%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E   HR L R     +I     G+  W   G ++   + + +R ++     +E++ P 
Sbjct: 15  DAEVDSHRLLVRAG---YIRRAAPGIYTWLPLGLRVLARVEAIVREEMDAAGAQEVHFPA 71

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L +  ++ SG W +Y   +F        +KD R      +  P H  +F   +K    S
Sbjct: 72  LLPREPYEASGRWTTYGQGIF-------RLKDRREGDY--LLAPTHEEMFTLLVKDLYSS 122

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH-NLIIS 413
           Y++LP+ L +  + YR+E +    GL+R R F   DA+ F      F        +    
Sbjct: 123 YKDLPLTLYQIQTKYRDE-ARPRAGLLRGREFIMKDAYSFDVDLARFERSYDAQRHAYQR 181

Query: 414 IYKDFGFEKIMVKLST 429
           I+   G E ++VK S+
Sbjct: 182 IFDRLGLEYVIVKASS 197


>gi|33863527|ref|NP_895087.1| prolyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9313]
 gi|81834835|sp|Q7TUU4|SYP_PROMM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|33640976|emb|CAE21434.1| tRNA synthetases, class-II (G, H, P and S):Prolyl-tRNA synthetase
           [Prochlorococcus marinus str. MIT 9313]
          Length = 599

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 67/138 (48%), Gaps = 6/138 (4%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINT--PQVLDQHLWQQSGHWDSYRANMFA 320
           SG+  +    W++ + + S ++ ++ D    + T  PQ+    LW++SG W  Y A    
Sbjct: 37  SGIYAYLPLMWRVLRKITSIVQEEM-DATGALETLLPQLQPAELWRRSGRWQGYTAGEGL 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +   +D  +  R   L P +     ++    L+SYR+LPV L +  S +R+E      GL
Sbjct: 96  MFHLED--RQGRELGLGPTHEEVITSLAGDLLRSYRQLPVTLYQIQSKFRDEIRPRF-GL 152

Query: 381 MRVRGFTQDDAHVFCTKE 398
           MR R F   DA+ F + E
Sbjct: 153 MRGREFIMKDAYSFHSCE 170


>gi|87302633|ref|ZP_01085450.1| prolyl-tRNA synthetase [Synechococcus sp. WH 5701]
 gi|87282977|gb|EAQ74934.1| prolyl-tRNA synthetase [Synechococcus sp. WH 5701]
          Length = 610

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 76/164 (46%), Gaps = 15/164 (9%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINT--P 297
           E+E   H+ L R   +  +A   SGV  +    W++   + + +R+++ D    + T  P
Sbjct: 17  EAEIPSHKLLLRGGYMRRVA---SGVYAYLPLLWRVLSKISAIVRQEM-DATGALETLLP 72

Query: 298 QVLDQHLWQQSGHWDSYRAN---MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
            +    LW++SG W  Y A    MF +       +  R+  L P +     A+    L+S
Sbjct: 73  ALQPASLWERSGRWQGYTAGEGIMFHL-----VDRQERSLGLGPTHEEVITALAADLLRS 127

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE 398
           YR+LPV L +  + +R+E      GLMR R F   DA+ F   E
Sbjct: 128 YRQLPVTLYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSFHADE 170


>gi|226952658|ref|ZP_03823122.1| alanyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
 gi|226836595|gb|EEH68978.1| alanyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
          Length = 884

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 71/155 (45%), Gaps = 15/155 (9%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSS 116
           S+E     D R+     HS  H++  A++ I  + VQ     +  D   +DF  +QP + 
Sbjct: 552 SVEATVKADIRAATARNHSATHLLHAALRQILGDHVQQKGSLVASDILRFDFANDQPVTF 611

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESK-KEAYKVEILESIPAKEN 170
           D+L QIE+ +   +  ++P   + L  E A+      LF  K  +  +V  + S+   +N
Sbjct: 612 DQLQQIERLVNAEVLANTPVTTELLDIETAKAKGAMMLFGEKYGDEVRVLSMGSVIEDKN 671

Query: 171 VTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAG 205
            ++       +LC G HV+ TG +   FK+    G
Sbjct: 672 FSI-------ELCGGIHVKRTGDI-GLFKITSEGG 698


>gi|195454743|ref|XP_002074382.1| GK10572 [Drosophila willistoni]
 gi|194170467|gb|EDW85368.1| GK10572 [Drosophila willistoni]
          Length = 331

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 91/189 (48%), Gaps = 22/189 (11%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVC-DLSDPVREGSIEIITPEDPRSLAVIR----H 75
           +T  + A+ +S    K++    I+G +  D+  P++E     + P +     V+      
Sbjct: 76  STPYNCAQHLSEGHCKRSALALIDGTIPWDMHRPLQESCTLQLLPFNVSEPHVVNKAFWR 135

Query: 76  SCAHIMAEAV-QSIWPEVQVAI----GPIIEDG-FYYDF----DKEQPFSSDELAQIEKK 125
           +C+ ++  A+ +S   E  + +    GP I+ G F +D      + QP S  EL  I  +
Sbjct: 136 TCSFLLGAALHKSFKSEANLQLHSFPGPNIKSGSFVHDIVLSSQRWQP-SKSELRAISAE 194

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN---VTLYRQGEWFDL 182
           M ++ A+D    +  +  E A E+F  K   YK E L SI  K+N   VTLYR GE  D+
Sbjct: 195 MVKMSAQDILIERLDVQQELAYEMF--KDSRYKSEQLPSI-GKQNQGRVTLYRVGEHIDI 251

Query: 183 CRGPHVRST 191
            RGP V ST
Sbjct: 252 SRGPMVAST 260


>gi|14601997|ref|NP_148542.1| prolyl-tRNA synthetase [Aeropyrum pernix K1]
 gi|74581728|sp|Q9Y9G0|SYP_AERPE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|5106029|dbj|BAA81340.1| prolyl-tRNA synthetase [Aeropyrum pernix K1]
          Length = 485

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 88/392 (22%), Positives = 162/392 (41%), Gaps = 63/392 (16%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAV 321
           G+  W   G++I + ++  +R  +    +EE+  P ++ +HL + +S H   +   ++ V
Sbjct: 37  GMGVWMPYGFQIRRRVLEVVRGLLDSTGHEEVLFPLLIPEHLLRRESEHIRGFEGEVYWV 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
                   D++  AL+P +      +    +KSYR+LP +  +  S++R E + +   ++
Sbjct: 97  THGGREELDVK-LALRPTSETSITYMETFWIKSYRQLPKKYYQVVSIFRYE-TKATRPMI 154

Query: 382 RVRGFTQ-DDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK--LSTRPEKRVGSD 438
           R+R  T   +AH   T  + F +  +     I +YK   F+++++   +S RPE      
Sbjct: 155 RLREVTTFKEAH---TVHESFEDAERQVLEAIEVYKAI-FDRLLIPYVISKRPE------ 204

Query: 439 ALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
             WD                             GA Y   F+ I+ D  GR  Q GT+  
Sbjct: 205 --WDKF--------------------------AGALYTIAFDTIMPD--GRALQIGTVHH 234

Query: 499 DFNLPSRFNAFYVNSHSEKC-HPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPI 553
                +R   F +    E+  HP    +  +G  +R +  +I     +    +P  ++PI
Sbjct: 235 LGQSFTRAFDFRIQMRDERLDHP---WQTSYGVSDRVVASLIAVHGDDRGLVIPPSVAPI 291

Query: 554 QAIVTTIT-------SSAVEYAQEIANLLKSHHLSIETDFRN-ETINYKIREHSIKKIPI 605
           Q +V  IT          + Y  + A  L+   L +  D R  E    K      K +PI
Sbjct: 292 QVVVIPITPGDEEKRGKVLTYTAKAAEALEKAGLRVHVDDREWERPGAKFYYWEAKGVPI 351

Query: 606 IIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
            +  G +EA + ++ I R  +    +V L +A
Sbjct: 352 RVEIGLREAEQDTLTIARRDTLEKTEVPLGEA 383


>gi|15674109|ref|NP_268284.1| prolyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
 gi|81856528|sp|Q9CDT4|SYP_LACLA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|12725184|gb|AAK06225.1|AE006441_3 prolyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
          Length = 616

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/149 (20%), Positives = 72/149 (48%), Gaps = 7/149 (4%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
           ++ +  +G+  +     ++ + L + MR +  +    E+  P +L   LW++SG +D+Y 
Sbjct: 31  YVRQVSAGIYAYLPLANRVLEKLKNIMREEFDEIGAVELLAPSLLTADLWRESGRYDTYG 90

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            +++ +K  D++      F L P +     ++    + SY++LP+ + +    +R+E   
Sbjct: 91  EDLYKLKNRDNS-----DFILGPTHEETMTSLVRDEITSYKKLPLNVYQIAPKFRDEKR- 144

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +GL+R R F   D + +   +   +E 
Sbjct: 145 PRYGLLRGREFLMKDGYSYHADQDSLDET 173


>gi|302537254|ref|ZP_07289596.1| prolyl-tRNA synthetase [Streptomyces sp. C]
 gi|302446149|gb|EFL17965.1| prolyl-tRNA synthetase [Streptomyces sp. C]
          Length = 570

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/188 (23%), Positives = 84/188 (44%), Gaps = 11/188 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   HR L R     ++    +GV  W   G K+   +   +R ++     +E+  P 
Sbjct: 28  DAETLSHRLLVRA---GYVRRSSAGVWTWLPLGKKVLDNVSRIVREEMDAIGAQEVLLPA 84

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++ SG W  Y   +F +K  D    D   + L P +      V      SY++L
Sbjct: 85  LLPKEPYEVSGRWSEYGDLLFRLK--DRKGAD---YLLGPTHEEIFTLVVKDQCTSYKDL 139

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH-NLIISIYKD 417
           PV L +  + YR+E +    G++R R F   D++ F   ++   E  ++H    + I++ 
Sbjct: 140 PVMLYQIQTKYRDE-ARPRSGVLRGREFQMKDSYSFDVSDEGLAESYRLHREAYVRIFER 198

Query: 418 FGFEKIMV 425
            G +  +V
Sbjct: 199 LGLDHRIV 206


>gi|52080260|ref|YP_079051.1| prolyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52785637|ref|YP_091466.1| prolyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|319645960|ref|ZP_08000190.1| prolyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
 gi|81825303|sp|Q65JJ1|SYP_BACLD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|52003471|gb|AAU23413.1| prolyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52348139|gb|AAU40773.1| ProS [Bacillus licheniformis ATCC 14580]
 gi|317391710|gb|EFV72507.1| prolyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
          Length = 572

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 77/166 (46%), Gaps = 10/166 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E + H+ L R      I ++ SGV  +     K+   + S +R ++ K +  E+  P 
Sbjct: 17  DAEAKSHQLLLRAG---FIRQNTSGVYSYMPLANKVIHKIQSIVREEMEKINAVEMLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +     WQ+SG W +Y   +  +K      +  R FAL   +     ++    +KSY+ L
Sbjct: 74  LQQAETWQESGRWYTYGPELMRLKD-----RHGREFALGATHEEVITSIVRDEVKSYKRL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           P+ L +  S +R+E      GL+R R F   DA+ F +  +  +E 
Sbjct: 129 PLTLYQIQSKFRDEKRPRF-GLLRGREFIMKDAYSFHSSAESLDET 173


>gi|296390688|ref|ZP_06880163.1| prolyl-tRNA synthetase [Pseudomonas aeruginosa PAb1]
          Length = 571

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 62/133 (46%), Gaps = 7/133 (5%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG+  W   G ++ + + + +R ++      E+  P V    LWQ+SG W+ Y   +  +
Sbjct: 37  SGLYTWLPMGLRVLRKVETIVREEMNAAGALEVLMPAVQPAELWQESGRWEQYGPELLRL 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           K   +     R F + P +      +  + L SY++LP+   +  + +R+E      GLM
Sbjct: 97  KDRHE-----REFCVGPTHEEVITDLARNELNSYKQLPINFYQIQTKFRDEIRPRF-GLM 150

Query: 382 RVRGFTQDDAHVF 394
           R R F   DA+ F
Sbjct: 151 RGREFIMKDAYSF 163


>gi|15596153|ref|NP_249647.1| prolyl-tRNA synthetase [Pseudomonas aeruginosa PAO1]
 gi|107100413|ref|ZP_01364331.1| hypothetical protein PaerPA_01001438 [Pseudomonas aeruginosa PACS2]
 gi|218893073|ref|YP_002441942.1| prolyl-tRNA synthetase [Pseudomonas aeruginosa LESB58]
 gi|81857350|sp|Q9I502|SYP_PSEAE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226701320|sp|B7UXX6|SYP_PSEA8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|9946862|gb|AAG04345.1|AE004529_11 prolyl-tRNA synthetase [Pseudomonas aeruginosa PAO1]
 gi|218773301|emb|CAW29113.1| prolyl-tRNA synthetase [Pseudomonas aeruginosa LESB58]
          Length = 571

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 62/133 (46%), Gaps = 7/133 (5%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG+  W   G ++ + + + +R ++      E+  P V    LWQ+SG W+ Y   +  +
Sbjct: 37  SGLYTWLPMGLRVLRKVETIVREEMNAAGALEVLMPAVQPAELWQESGRWEQYGPELLRL 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           K   +     R F + P +      +  + L SY++LP+   +  + +R+E      GLM
Sbjct: 97  KDRHE-----REFCVGPTHEEVITDLARNELNSYKQLPINFYQIQTKFRDEIRPRF-GLM 150

Query: 382 RVRGFTQDDAHVF 394
           R R F   DA+ F
Sbjct: 151 RGREFIMKDAYSF 163


>gi|75760863|ref|ZP_00740877.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
 gi|218898971|ref|YP_002447382.1| prolyl-tRNA synthetase [Bacillus cereus G9842]
 gi|228902322|ref|ZP_04066479.1| Prolyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
 gi|228966764|ref|ZP_04127808.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|226731427|sp|B7IUH7|SYP_BACC2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|74491647|gb|EAO54849.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
 gi|218543850|gb|ACK96244.1| prolyl-tRNA synthetase [Bacillus cereus G9842]
 gi|228792863|gb|EEM40421.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228857291|gb|EEN01794.1| Prolyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
          Length = 566

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 79/166 (47%), Gaps = 10/166 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R ++ +    E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K      ++ R FAL   +      +    +KSY++L
Sbjct: 74  MQAAELWQESGRWYSYGSELMRMKD-----RNAREFALGATHEEVITDLVRDEIKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           P+ L +  + +R+E      GL+R R F   DA+ F   ++  +E 
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEV 173


>gi|223985091|ref|ZP_03635187.1| hypothetical protein HOLDEFILI_02492 [Holdemania filiformis DSM
           12042]
 gi|223962913|gb|EEF67329.1| hypothetical protein HOLDEFILI_02492 [Holdemania filiformis DSM
           12042]
          Length = 539

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 96/208 (46%), Gaps = 11/208 (5%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAI-NGKVCDLSDPV-REGSIEII 62
           +KL FP+ +    P    G+ +A+  +     +A+A  I NGKV DL+  + + G+ E I
Sbjct: 2   VKLRFPNQTEIEIP---NGTTIAQLAAEQENPRALAGGILNGKVHDLNYRLNKSGAFEWI 58

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T        +   + + +   AV+  +  + V I   +  G Y    +++P +  EL Q+
Sbjct: 59  TRGSLIGQMMTERTLSFLFITAVRLCFDGLDVLIEHSLAGGLYGTLIRKEPVTLAELEQV 118

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENV-TLYRQGEWF 180
           E KM+++IA+  P  ++ +S  +A   FE+     K  +L +   AK ++ T     ++F
Sbjct: 119 EAKMRDMIAKKEPIHRRVVSKAEAVAHFEALGMPDKASLLRQRTSAKCSIYTCAGVDDYF 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYW 208
                P     GQ    F L KV   +W
Sbjct: 179 YGVMLPDASWIGQ----FTLRKVHQGFW 202


>gi|116048881|ref|YP_792318.1| prolyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|313105843|ref|ZP_07792106.1| prolyl-tRNA synthetase [Pseudomonas aeruginosa 39016]
 gi|122257988|sp|Q02IB8|SYP_PSEAB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|115584102|gb|ABJ10117.1| prolyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|310878608|gb|EFQ37202.1| prolyl-tRNA synthetase [Pseudomonas aeruginosa 39016]
          Length = 571

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 62/133 (46%), Gaps = 7/133 (5%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG+  W   G ++ + + + +R ++      E+  P V    LWQ+SG W+ Y   +  +
Sbjct: 37  SGLYTWLPMGLRVLRKVETIVREEMNAAGALEVLMPAVQPAELWQESGRWEQYGPELLRL 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           K   +     R F + P +      +  + L SY++LP+   +  + +R+E      GLM
Sbjct: 97  KDRHE-----REFCVGPTHEEVITDLARNELNSYKQLPINFYQIQTKFRDEIRPRF-GLM 150

Query: 382 RVRGFTQDDAHVF 394
           R R F   DA+ F
Sbjct: 151 RGREFIMKDAYSF 163


>gi|256838580|ref|ZP_05544090.1| uridine kinase [Parabacteroides sp. D13]
 gi|262382948|ref|ZP_06076085.1| uridine kinase [Bacteroides sp. 2_1_33B]
 gi|256739499|gb|EEU52823.1| uridine kinase [Parabacteroides sp. D13]
 gi|262295826|gb|EEY83757.1| uridine kinase [Bacteroides sp. 2_1_33B]
          Length = 555

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/190 (23%), Positives = 81/190 (42%), Gaps = 6/190 (3%)

Query: 11  DGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRS 69
           + + K+ P+ ++  D+  ++   L  + +   +N K   L+    +   IE I       
Sbjct: 12  NNTYKDVPIGSSLLDIYTAVGAPLRYRPMNAQVNNKTESLNFRCWQPKDIEFIDYTQLSG 71

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           L     S  HI ++AV  IWP   + +   +  G+Y      +    + + +I+K+M E+
Sbjct: 72  LRTYVRSLCHIFSKAVYDIWPTATLNLEHPVSKGYYCVIHNGKNIDLETIEKIKKRMWEL 131

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILES--IPAKENVTLYRQGEWFDLCRGPH 187
           I  D PFL + +    A  LF  +    K  ++E+  +P      L     +F  C  P 
Sbjct: 132 IDADLPFLHKSVRTVDAAVLFRERGMNDKARLIETAGLPYTSYYELEGYINFFYGCLTP- 190

Query: 188 VRSTGQVKKF 197
             STG ++ F
Sbjct: 191 --STGYIQLF 198


>gi|28493150|ref|NP_787311.1| prolyl-tRNA synthetase [Tropheryma whipplei str. Twist]
 gi|81839144|sp|Q83GR4|SYP_TROWT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|28476190|gb|AAO44280.1| prolyl-tRNA synthetase [Tropheryma whipplei str. Twist]
          Length = 613

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/187 (24%), Positives = 81/187 (43%), Gaps = 20/187 (10%)

Query: 216 MLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKI 275
           M++++ G  + T         F E+    + R     +   +I + GSG+  W   G K+
Sbjct: 1   MITKVSGFLFRT---------FREDPATTESRGYGFLLRAGYIRQTGSGIFSWMPLGLKV 51

Query: 276 FQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT- 333
              + + +R ++   +  E+  P +    L++QSG W  Y  ++F        +KD R  
Sbjct: 52  RHKIENIIRYEMGQVNAIEVLFPALFSADLFKQSGRWSEYGDDIF-------RLKDRRQG 104

Query: 334 -FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
            + L P +      +      SYR+LP  + +    YR+E      GL+R R F+  DA+
Sbjct: 105 DYLLAPTHEEAFTQMMKEICTSYRDLPRTVYQIQDKYRDELR-PRAGLLRSREFSMKDAY 163

Query: 393 VFCTKEQ 399
            F   E+
Sbjct: 164 SFDLDEK 170


>gi|85717006|ref|ZP_01047968.1| prolyl-tRNA synthetase [Nitrobacter sp. Nb-311A]
 gi|85696130|gb|EAQ34026.1| prolyl-tRNA synthetase [Nitrobacter sp. Nb-311A]
          Length = 439

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 90/441 (20%), Positives = 172/441 (39%), Gaps = 55/441 (12%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTP 297
           +E+E   HR + R      I ++ +G+  W   G ++ + + + +R  + +    E+  P
Sbjct: 16  KEAEIVSHRLMLRAG---MIRQEAAGIYAWLPLGLRVLKKIEAIVREEQNRAGAIELLMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW++SG +D+Y   M  ++      +  R     P N      +F   ++SY+ 
Sbjct: 73  TLQLADLWRESGRYDAYGPEMLRIQD-----RHKRELLYGPTNEEMITEIFRGYIRSYKS 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYK 416
           LP+ L      +R+E      G+MR R F   DA+ F   E        K+    +  + 
Sbjct: 128 LPLNLYHIQWKFRDEQRPRF-GVMRGREFLMKDAYSFDIDEAGARRSYNKMFVAYLRTFA 186

Query: 417 DFGFEKIMVKLSTRPEKRVGSD------ALWDDAEN---IMKGVLDT-IKNSSQD----- 461
             G + I ++  T P   +G D       L +  E+   I K VLD  +  +  D     
Sbjct: 187 RMGLKAIPMRAETGP---IGGDLSHEFIVLAETGESGVYIDKDVLDLPVPGTDVDYDGDL 243

Query: 462 -----RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE 516
                +        E    GP++E      +  + +  T  ++      F   Y +S   
Sbjct: 244 TPIVKQWTVAYAATEDVHDGPRYER----EVPEERRVHTRGIEVGQIFYFGTKYSDSMKT 299

Query: 517 KC-------HPVMIHRAVFG-SIERFIGIMIE--NFKGNL--PLWLSPIQAIVTTITSSA 564
                     P  IH   +G  + R +G +IE  + +G +  P  ++P +  +  +   A
Sbjct: 300 LVTGPDGVEQP--IHGGSYGVGVSRLVGAIIEACHDEGGIKWPDAVAPFRVAILNLKQGA 357

Query: 565 VEY---AQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
            +     + I   L +  + +  D  ++    K     +  IP  ++ G K  +E  + I
Sbjct: 358 GDTDAACERIYRELSAKGIDVLYDDTDQRAGAKFATADLIGIPWQVMVGPKGLAEGKVEI 417

Query: 622 RRFGSTTTQKVSLLDAIPILT 642
           +R    + + V+L D +  LT
Sbjct: 418 KRREDGSRENVALEDVVARLT 438


>gi|319408595|emb|CBI82250.1| Prolyl-tRNA synthetase [Bartonella schoenbuchensis R1]
          Length = 441

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 69/157 (43%), Gaps = 10/157 (6%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTP 297
           +E+E   HR + R      I +  +G+  W   G K+   + + +R + K     EI  P
Sbjct: 16  KEAEIVSHRLMLRAG---MIRQQTAGIYSWLPLGKKVLDKVCTIIREEQKQAGALEILMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW +SG +D Y   M  +K   +     R     P N      +F   ++SY++
Sbjct: 73  TIQSVDLWHESGRYDDYGFEMLRIKDRQE-----RDLLYGPTNEEIVTDIFRSYVRSYKD 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           LP+ L +    +R+E      G+MR R F   DA+ F
Sbjct: 128 LPLNLYQIQWKFRDEIRPRF-GVMRSREFLMKDAYSF 163


>gi|210633121|ref|ZP_03297688.1| hypothetical protein COLSTE_01601 [Collinsella stercoris DSM 13279]
 gi|210159275|gb|EEA90246.1| hypothetical protein COLSTE_01601 [Collinsella stercoris DSM 13279]
          Length = 569

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 75/165 (45%), Gaps = 10/165 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+E   HR + R      I +  +G+  +    W+  + +   +R ++     +E+  P 
Sbjct: 17  EAELASHRLMLRA---GLIRKQAAGLYSYLPLAWRSLRKIEDIVRDEMDAAGAQELLMPI 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D  +W++SG +++Y   +  +    D     R F L P +      +  + LKSY++L
Sbjct: 74  MVDAQVWRESGRYNAYGPELMRIDDRHD-----REFVLGPTHEETVTDLIKNELKSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE 403
           PV L +    +R+E      GLMR R F   D + F   ++   E
Sbjct: 129 PVNLYQIQDKFRDEMRPRF-GLMRGREFIMKDGYSFNATQESLQE 172


>gi|86160202|ref|YP_466987.1| alanyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|123496877|sp|Q2IG40|SYA_ANADE RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|85776713|gb|ABC83550.1| alanyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 905

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 70/148 (47%), Gaps = 18/148 (12%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSS 116
           ++E+   +  R L    HS  H++  A++ +  E V+ A   +  D   +DF   QP + 
Sbjct: 578 AVELSVDDRRRDLVRANHSATHLLQLALREVLGEHVKQAGSVVAPDYLRFDFSHFQPVTE 637

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARE----LFESKKEAYKVEILESIPAKENVT 172
           +ELA +E+++ E++  ++      L  E+AR     +   +K    V ++   P+KE   
Sbjct: 638 EELAAVERRVNELVRENAETETAVLKLEEARHAGAMMIFGEKYGDVVRVVRIGPSKE--- 694

Query: 173 LYRQGEWFDLCRGPHVRSTGQVKKFFKL 200
                    LC G HVR +G +  FFK+
Sbjct: 695 ---------LCGGTHVRRSGDI-AFFKI 712


>gi|152984493|ref|YP_001349901.1| prolyl-tRNA synthetase [Pseudomonas aeruginosa PA7]
 gi|166980141|sp|A6VA16|SYP_PSEA7 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|150959651|gb|ABR81676.1| prolyl-tRNA synthetase [Pseudomonas aeruginosa PA7]
          Length = 571

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 62/133 (46%), Gaps = 7/133 (5%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG+  W   G ++ + + + +R ++      E+  P V    LWQ+SG W+ Y   +  +
Sbjct: 37  SGLYTWLPMGLRVLRKVETVVREEMNAAGALEVLMPAVQPAELWQESGRWEQYGPELLRL 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           K   +     R F + P +      +  + L SY++LP+   +  + +R+E      GLM
Sbjct: 97  KDRHE-----REFCVGPTHEEVITDLARNELNSYKQLPINFYQIQTKFRDEIRPRF-GLM 150

Query: 382 RVRGFTQDDAHVF 394
           R R F   DA+ F
Sbjct: 151 RGREFIMKDAYSF 163


>gi|325957052|ref|YP_004292464.1| prolyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
 gi|325333617|gb|ADZ07525.1| prolyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
          Length = 565

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/169 (24%), Positives = 78/169 (46%), Gaps = 16/169 (9%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHL-----WQQSGHW 311
           +I +  +GV  +   G+++ +   +     I+ + + IN P+++  HL     WQ+SG +
Sbjct: 31  YIRQVTAGVYAYLPLGYRVLRKAEAI----IEQEMDRINVPEMIMPHLLPATLWQESGRY 86

Query: 312 DSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRN 371
             Y   MF +K      +  R   L P +      +    LKSY+++P+ L +  + +R+
Sbjct: 87  KKYGPEMFKLKD-----RHGRESLLGPTHEETFTEIIAKNLKSYKQMPMALYQIQTKFRD 141

Query: 372 EPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFG 419
           E      GL+R R F   D + F  T++Q+  +     N    I+K  G
Sbjct: 142 ENRPRF-GLLRGREFVMLDGYSFAATRDQLDEQFNDQENAYKRIFKRAG 189


>gi|301307737|ref|ZP_07213694.1| phosphoribulokinase family protein [Bacteroides sp. 20_3]
 gi|300834411|gb|EFK65024.1| phosphoribulokinase family protein [Bacteroides sp. 20_3]
          Length = 555

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/190 (23%), Positives = 81/190 (42%), Gaps = 6/190 (3%)

Query: 11  DGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRS 69
           + + K+ P+ ++  D+  ++   L  + +   +N K   L+    +   IE I       
Sbjct: 12  NNTYKDVPIGSSLLDIYTAVGAPLRYRPMNAQVNNKTESLNFRCWQPKDIEFIDYTQLSG 71

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           L     S  HI ++AV  IWP   + +   +  G+Y      +    + + +I+K+M E+
Sbjct: 72  LRTYVRSLCHIFSKAVYDIWPTATLNLEHPVSKGYYCVIHNGKNIDLETIEKIKKRMWEL 131

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILES--IPAKENVTLYRQGEWFDLCRGPH 187
           I  D PFL + +    A  LF  +    K  ++E+  +P      L     +F  C  P 
Sbjct: 132 IDADLPFLHKSVRTVDAAVLFRERGMNDKARLIETAGLPYTSYYELEGYINFFYGCLTP- 190

Query: 188 VRSTGQVKKF 197
             STG ++ F
Sbjct: 191 --STGYIQLF 198


>gi|213969174|ref|ZP_03397313.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. tomato T1]
 gi|301384830|ref|ZP_07233248.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. tomato Max13]
 gi|302064183|ref|ZP_07255724.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. tomato K40]
 gi|302130620|ref|ZP_07256610.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. tomato NCPPB 1108]
 gi|213926172|gb|EEB59728.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. tomato T1]
          Length = 571

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 64/134 (47%), Gaps = 7/134 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++      EI  P +    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYTWLPMGLRVLRKVEAIVREEMNAAGALEILMPGIQPAELWQESGRWEQYGPEL-- 93

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           ++  D   +  R F L P +      +  + L SY++LP+ + +  + +R+E      GL
Sbjct: 94  MRLVD---RHNREFCLGPTHEEVITDLARNELNSYKQLPINMYQIQTKFRDEIRPRF-GL 149

Query: 381 MRVRGFTQDDAHVF 394
           MR R F   DA+ F
Sbjct: 150 MRGREFVMKDAYSF 163


>gi|95930704|ref|ZP_01313437.1| prolyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
 gi|95133184|gb|EAT14850.1| prolyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
          Length = 571

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 49/102 (48%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P V+   LW++SG W+ Y   +  ++   DT      F L P +      V    +
Sbjct: 68  ELLMPMVVPAGLWEESGRWEQYGKELLRIRDRKDT-----EFCLGPTHEEVITDVVRGTV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           +SYR+LP+ L +    +R+E      GLMR R F   DA+ F
Sbjct: 123 RSYRQLPLNLYQIQGKFRDEIRPRF-GLMRGREFIMKDAYSF 163


>gi|315038578|ref|YP_004032146.1| prolyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
 gi|312276711|gb|ADQ59351.1| prolyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
          Length = 565

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/169 (24%), Positives = 78/169 (46%), Gaps = 16/169 (9%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHL-----WQQSGHW 311
           +I +  +GV  +   G+++ +   +     I+ + + IN P+++  HL     WQ+SG +
Sbjct: 31  YIRQVTAGVYAYLPLGYRVLRKAEAI----IEQEMDRINVPEMIMPHLLPATLWQESGRY 86

Query: 312 DSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRN 371
             Y   MF +K      +  R   L P +      +    LKSY+++P+ L +  + +R+
Sbjct: 87  KKYGPEMFKLKD-----RHGRESLLGPTHEETFTEIIAKNLKSYKQMPMALYQIQTKFRD 141

Query: 372 EPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFG 419
           E      GL+R R F   D + F  T++Q+  +     N    I+K  G
Sbjct: 142 ENRPRF-GLLRGREFVMLDGYSFAATRDQLDEQFNDQENAYKRIFKRAG 189


>gi|157414790|ref|YP_001482046.1| alanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81116]
 gi|205830015|sp|A8FKT2|SYA_CAMJ8 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|157385754|gb|ABV52069.1| alanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81116]
 gi|307747428|gb|ADN90698.1| Alanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni M1]
 gi|315931702|gb|EFV10657.1| alanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 327]
          Length = 842

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/196 (24%), Positives = 85/196 (43%), Gaps = 24/196 (12%)

Query: 14  IKNFPVHAT-GSDVAES---ISRSLAKKAVAVAINGKVCDLSDPVREGSIEIITPEDPRS 69
           +KN P +AT G   A+S     R +        +N       + ++ G I     +  + 
Sbjct: 483 LKNTPFYATSGGQSADSGFMAKREVLDTQKFFNLNLSFVKAGEELKVGDIVHARIDTEKR 542

Query: 70  LAVIRH-SCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQ 127
             + RH S  H++  A++ I        G ++E +   +DF   +  S +EL  IEK++ 
Sbjct: 543 EQIARHHSATHLLHHALREILGSHVSQAGSLVESNKLRFDFTHHKALSKEELENIEKRVN 602

Query: 128 EIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E+I   S  + + +  E+A++     LF  K +              NV +   GE  +L
Sbjct: 603 EMIINSSEAILENMPLEEAKKSGAIALFNEKYQG-------------NVRVLTLGESKEL 649

Query: 183 CRGPHVRSTGQVKKFF 198
           C G HV++T Q+  F+
Sbjct: 650 CGGTHVKNTAQIGSFY 665


>gi|270295408|ref|ZP_06201609.1| uridine kinase [Bacteroides sp. D20]
 gi|270274655|gb|EFA20516.1| uridine kinase [Bacteroides sp. D20]
          Length = 557

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/184 (21%), Positives = 83/184 (45%), Gaps = 2/184 (1%)

Query: 15  KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVI 73
           K FP+ ++  D+    + +   + V+  +N +   L+  V     +E +   D   +   
Sbjct: 16  KEFPIGSSLLDIYYGFNLNFPYQVVSAKVNNRSEGLNFRVYNNKDVEFLDIRDSSGMRTY 75

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
             S   I+ +AV  ++PE ++ +   +  G++ +    +    +++  I+K+MQEIIA +
Sbjct: 76  VRSLCFILYKAVSELFPEGKLFVEHPVSKGYFCNLRIGRSIELEDVTAIKKRMQEIIAEN 135

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQ 193
            P+ +      +A  +F  +    KV++LE+         Y  G+  D   G  + STG 
Sbjct: 136 IPYHRVECHTTEAVRIFSERGMNDKVKLLET-SGSLYTYYYTLGDTVDYYYGNLLPSTGF 194

Query: 194 VKKF 197
           +  F
Sbjct: 195 IWLF 198


>gi|47569097|ref|ZP_00239786.1| prolyl-tRNA synthetase [Bacillus cereus G9241]
 gi|47554259|gb|EAL12621.1| prolyl-tRNA synthetase [Bacillus cereus G9241]
          Length = 566

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 79/166 (47%), Gaps = 10/166 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R ++ +    E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K      ++ R FAL   +      +    +KSY++L
Sbjct: 74  MQAAELWQESGRWYSYGSELMRMKD-----RNAREFALGATHEEVITDLVRDEVKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           P+ L +  + +R+E      GL+R R F   DA+ F   ++  +E 
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEV 173


>gi|300783993|ref|YP_003764284.1| prolyl-tRNA synthetase [Amycolatopsis mediterranei U32]
 gi|299793507|gb|ADJ43882.1| prolyl-tRNA synthetase [Amycolatopsis mediterranei U32]
          Length = 582

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/196 (22%), Positives = 88/196 (44%), Gaps = 19/196 (9%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   HR L R   +  +A  G     W   G ++ + + + +R ++     +EI  P 
Sbjct: 19  DAEVPSHRLLVRAGYVRRVAPGGYS---WLPLGLRVLRRIEAVVREEMNAMGAQEIQFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L +  ++ +G W  Y   +F +K  D    D        +  P H  +F   +K    S
Sbjct: 76  LLPREPYETTGRWTEYGDGLFRLK--DRKGADY-------LLGPTHEELFALTVKGEYSS 126

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH-NLIIS 413
           YR+ PV L +  + YR+E +    G++R R F   D++ F   ++      + H +  + 
Sbjct: 127 YRDYPVTLYQIQTKYRDE-ARPRAGILRGREFVMKDSYSFDLDDEGLARSYQAHRDAYVK 185

Query: 414 IYKDFGFEKIMVKLST 429
           ++   G E ++VK ++
Sbjct: 186 LFDRLGLEYVVVKATS 201


>gi|162139874|ref|YP_745105.2| prolyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1]
 gi|148887022|sp|Q0BSM0|SYP_GRABC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
          Length = 440

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 62/138 (44%), Gaps = 7/138 (5%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I ++ +G+  W   G ++   + + +R  +     +E+  P +    LW++SG +D+Y  
Sbjct: 32  IQQEAAGIYAWLPAGLRVLNAIANIVRDEQAGIGAQEVLMPTIQSADLWRESGRYDAYGP 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  +K      +  R     P N      ++ H +KSYRELP    +    +R+E    
Sbjct: 92  EMLRLKD-----RHERDLLYGPTNEEVITDIYRHSVKSYRELPQMAYQIQWKFRDEIRPR 146

Query: 377 LHGLMRVRGFTQDDAHVF 394
             G+MR R F   D + F
Sbjct: 147 F-GVMRGREFLMKDGYSF 163


>gi|330964813|gb|EGH65073.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. actinidiae str.
           M302091]
          Length = 571

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 7/133 (5%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG+  W   G ++ + + + +R ++      EI  P +    LWQ+SG W+ Y   +  +
Sbjct: 37  SGLYTWLPMGLRVLRKVEAIVREEMNAAGALEILMPGIQPAELWQESGRWEQYGPEL--M 94

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           +  D   +  R F L P +      +  + L SY++LP+ + +  + +R+E      GLM
Sbjct: 95  RLVD---RHNREFCLGPTHEEVITDLARNELNSYKQLPINMYQIQTKFRDEIRPRF-GLM 150

Query: 382 RVRGFTQDDAHVF 394
           R R F   DA+ F
Sbjct: 151 RGREFVMKDAYSF 163


>gi|330872665|gb|EGH06814.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. morsprunorum str.
           M302280PT]
          Length = 571

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 7/133 (5%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG+  W   G ++ + + + +R ++      EI  P +    LWQ+SG W+ Y   +  +
Sbjct: 37  SGLYTWLPMGLRVLRKVEAIVREEMNAAGALEILMPGIQPAELWQESGRWEQYGPEL--M 94

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           +  D   +  R F L P +      +  + L SY++LP+ + +  + +R+E      GLM
Sbjct: 95  RLVD---RHNREFCLGPTHEEVITDLARNELNSYKQLPINMYQIQTKFRDEIRPRF-GLM 150

Query: 382 RVRGFTQDDAHVF 394
           R R F   DA+ F
Sbjct: 151 RGREFVMKDAYSF 163


>gi|114316122|gb|ABI62182.1| prolyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1]
          Length = 499

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 64/138 (46%), Gaps = 7/138 (5%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I ++ +G+  W   G ++   + + +R  +     +E+  P +    LW++SG +D+Y  
Sbjct: 91  IQQEAAGIYAWLPAGLRVLNAIANIVRDEQAGIGAQEVLMPTIQSADLWRESGRYDAYGP 150

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  +K  D   +DL      P N      ++ H +KSYRELP    +    +R+E    
Sbjct: 151 EMLRLK--DRHERDL---LYGPTNEEVITDIYRHSVKSYRELPQMAYQIQWKFRDEIRPR 205

Query: 377 LHGLMRVRGFTQDDAHVF 394
             G+MR R F   D + F
Sbjct: 206 F-GVMRGREFLMKDGYSF 222


>gi|113475053|ref|YP_721114.1| prolyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
 gi|123161090|sp|Q116D3|SYP_TRIEI RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|110166101|gb|ABG50641.1| prolyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
          Length = 601

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 73/162 (45%), Gaps = 9/162 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+E   H+ L R     +I   G+G+  +     ++   + + +R ++     +E   PQ
Sbjct: 17  EAEIPSHKLLIRA---GYIRRIGNGIYAYLPLMLRVINKVSTIVREEMNATGAQECLLPQ 73

Query: 299 VLDQHLWQQSGHWDSY-RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           +    LWQ+SG WD+Y +A        D   +  R   L P +      +    ++SYR+
Sbjct: 74  LQPAELWQESGRWDTYTQAEGIMFSLID---RQNRELGLGPTHEEVITTIAKDIIRSYRQ 130

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQ 399
           LP+ L +  + +R+E      GLMR R F   D + F   E+
Sbjct: 131 LPIHLYQLQTKFRDEIRPRF-GLMRGREFIMKDGYSFHADEE 171


>gi|46579756|ref|YP_010564.1| prolyl-tRNA synthetase [Desulfovibrio vulgaris str. Hildenborough]
 gi|81830448|sp|Q72CD8|SYP_DESVH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|46449171|gb|AAS95823.1| prolyl-tRNA synthetase [Desulfovibrio vulgaris str. Hildenborough]
 gi|311233547|gb|ADP86401.1| prolyl-tRNA synthetase [Desulfovibrio vulgaris RCH1]
          Length = 574

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/169 (23%), Positives = 77/169 (45%), Gaps = 15/169 (8%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG+  +   G +    + + +R ++ +   +E+  P V    LWQ++G W+ Y   +   
Sbjct: 37  SGIYTFMPMGLRALNKVAAIVREEMNRAGAQEVLMPMVQPADLWQETGRWEFYGKELLRF 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           +  +D     R + L P +      +    ++SYR+LP+ L +  + +R+E      GLM
Sbjct: 97  RDRND-----RDYCLGPTHEEVITDLVRGEVRSYRQLPINLYQIQTKFRDEIRPRF-GLM 150

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR 430
           R R F   DA+ F   +   +E  K      ++Y    +++I  +L  R
Sbjct: 151 RGREFVMKDAYSFDRDQSGCDESYK------AMYA--AYQRIFSRLGLR 191


>gi|241761006|ref|ZP_04759095.1| prolyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC
           10988]
 gi|260753028|ref|YP_003225921.1| prolyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
 gi|241374625|gb|EER64086.1| prolyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC
           10988]
 gi|258552391|gb|ACV75337.1| prolyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
          Length = 443

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 85/418 (20%), Positives = 159/418 (38%), Gaps = 45/418 (10%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  +G+  W   G ++ + +   +R  + +    E+  P +    LW++SG +D+Y  
Sbjct: 32  IRQTAAGIYAWLPLGLRVLRRIEKIIREEQARAGALELLMPTLQTADLWRESGRYDAYGP 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  +K   +     R     P N     A+    L+SYR+LP         +R+E    
Sbjct: 92  EMLRIKDRHN-----RELLYGPTNEEMITALIRDNLQSYRDLPRIFYHIQWKFRDEVRPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
             G+MR R F   DA+ F   E        ++    ++ +   G   I ++  T P   +
Sbjct: 147 F-GVMRGREFLMKDAYSFDIDETAGRHNYNRMFVAYLNSFSRLGLRAIPMQADTGP---I 202

Query: 436 GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK-FEYILKDAIG------ 488
           G D   +       G  D   +S+ ++    +   E  F  PK  + I+ D I       
Sbjct: 203 GGDLSHEFIVLAPNGESDVFYHSNWEQPTRHI---EADFDDPKALQSIVNDHISDYAATD 259

Query: 489 ------RDWQCG-TIQVDFNLPSRFNAFYVNSHSEKC---------HPVMIHRAVFG-SI 531
                 R+ Q G  ++    +      F+   +S+            P+ I    +G  I
Sbjct: 260 EKRDPLREAQAGDKLRQSRGIEVGHIFFFGTKYSKPMGFTLPGPDGKPIPIQMGSYGIGI 319

Query: 532 ERFIGIMIE-NFKGNLPLWLSPIQAIVTTITSSAVE------YAQEIANLLKSHHLSIET 584
            R +G +IE +   N  +W   +      + +  ++       A  +   L++  +    
Sbjct: 320 SRLLGAIIEASHDDNGIIWPEAVAPYHVGLINLRIDDENCRAIADSLYQRLEAAGIDTLY 379

Query: 585 DFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           D RNE    K     +  +P  ++ G K A +  + ++   S   Q +S+ DA  +LT
Sbjct: 380 DDRNERGGAKFATMDLIGLPWQVVIGPKGAEKGVVELKNRASGEKQTISVEDAFNLLT 437


>gi|26554256|ref|NP_758190.1| prolyl-tRNA synthetase [Mycoplasma penetrans HF-2]
 gi|81846191|sp|Q8EUW7|SYP_MYCPE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|26454265|dbj|BAC44594.1| prolyl aminoacyl-tRNA synthetase [Mycoplasma penetrans HF-2]
          Length = 470

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 87/396 (21%), Positives = 164/396 (41%), Gaps = 66/396 (16%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEI----NTPQVLDQHL------WQQ 307
           I E+ + V +   KG  +F+     + ++I++++ +I    NT +V    L       ++
Sbjct: 18  IIENANLVDYGLVKGTIMFKPYGFAIWKRIQEEFNKILVSLNTAEVCFPMLIPYSEFMKE 77

Query: 308 SGHWDSYRANMFAVK-CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFG 366
             H + +   +F V    +  ++D     ++P +       F   +KSY +LP  L ++G
Sbjct: 78  KEHVEGFNPELFKVSHLGEKKLED--ELVIRPTSEISFCNYFKKNIKSYNDLPCILNQWG 135

Query: 367 SVYRNEPSGSLHGLMRVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
           SV+R E +      +R   F   + H VF  K++ F+  + + N       D+    +++
Sbjct: 136 SVFRVEKNT--RPFLRTSEFLWQEQHAVFADKKEAFDFSITMVNEYKKFVNDYLSIAVLM 193

Query: 426 KLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKD 485
              T  E+  G+D  +            TI+           L+ +G         +L+ 
Sbjct: 194 GEKTENERFAGADNTF------------TIE----------ALMPDGQ--------VLQS 223

Query: 486 AIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           A       GT     N    ++  Y   ++   + +M   +  G   R IG +I +   N
Sbjct: 224 ATSH--YLGT-----NFAKSYDLKYQTKNNN--YDLMFQTSA-GLSTRIIGAIIMSHSDN 273

Query: 546 ----LPLWLSPIQ-AIVTT--ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
               LP  ++PIQ AIVT+  +   + E      NL    +   +T F  +++  +++E+
Sbjct: 274 NGLVLPFKIAPIQFAIVTSNEVNKDSDELKAIYKNLFGYKY---QTYFVEKSLGLQLQEN 330

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
            IK IP  +I G KE    +I I R  +   Q +S 
Sbjct: 331 EIKGIPFQLILGKKEIENNTITIYRRDTREKQNISF 366


>gi|229157395|ref|ZP_04285473.1| Prolyl-tRNA synthetase [Bacillus cereus ATCC 4342]
 gi|228626122|gb|EEK82871.1| Prolyl-tRNA synthetase [Bacillus cereus ATCC 4342]
          Length = 566

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 79/166 (47%), Gaps = 10/166 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R ++ +    E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K      ++ R FAL   +      +    +KSY++L
Sbjct: 74  MQAAELWQESGRWYSYGSELMRMKD-----RNAREFALGATHEEVITDLVRDEVKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           P+ L +  + +R+E      GL+R R F   DA+ F   ++  +E 
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEV 173


>gi|327183775|gb|AEA32222.1| prolyl-tRNA synthetase [Lactobacillus amylovorus GRL 1118]
          Length = 565

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/169 (24%), Positives = 78/169 (46%), Gaps = 16/169 (9%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHL-----WQQSGHW 311
           +I +  +GV  +   G+++ +   +     I+ + + IN P+++  HL     WQ+SG +
Sbjct: 31  YIRQVTAGVYAYLPLGYRVLRKAEAI----IEQEMDRINVPEMIMPHLLPATLWQESGRY 86

Query: 312 DSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRN 371
             Y   MF +K      +  R   L P +      +    LKSY+++P+ L +  + +R+
Sbjct: 87  KKYGPEMFKLKD-----RHGRESLLGPTHEETFTEIIAKNLKSYKQMPMALYQIQTKFRD 141

Query: 372 EPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFG 419
           E      GL+R R F   D + F  T++Q+  +     N    I+K  G
Sbjct: 142 ENRPRF-GLLRGREFVMLDGYSFAATRDQLDEQFNDQENAYKRIFKRAG 189


>gi|226942102|ref|YP_002797176.1| prolyl-tRNA synthetase [Laribacter hongkongensis HLHK9]
 gi|226717029|gb|ACO76167.1| Syp [Laribacter hongkongensis HLHK9]
          Length = 569

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 63/135 (46%), Gaps = 7/135 (5%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG+  W   G ++ + + + +R ++ +    E+  P +    LWQ+SG W+ Y   +  V
Sbjct: 37  SGLYTWMPLGLRVLRKVEAIVREEMNRAGAIELLMPAIQPAELWQESGRWEFYGKELLRV 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           K   +     R F + P +           +KSY++LP+   +  + +R+E      G+M
Sbjct: 97  KDRHE-----RDFCVGPTHEEVITDAVRKEVKSYKQLPLNFYQIQTKFRDEVRPRF-GVM 150

Query: 382 RVRGFTQDDAHVFCT 396
           R R F   DA+ F T
Sbjct: 151 RAREFVMKDAYSFHT 165


>gi|224823461|ref|ZP_03696570.1| prolyl-tRNA synthetase [Lutiella nitroferrum 2002]
 gi|224603916|gb|EEG10090.1| prolyl-tRNA synthetase [Lutiella nitroferrum 2002]
          Length = 571

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 73/168 (43%), Gaps = 15/168 (8%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  +G+  W   G K  + + + +R ++ +    E+  P V    LWQ++G WD+   
Sbjct: 32  IRKAAAGIYSWMPMGLKSLRKVEAIVREEMNRAGAIEVIMPIVQPAGLWQETGRWDTMGE 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M   K      +  R F ++P +      +    LKSYR LP    +  + +R+E    
Sbjct: 92  EMLRFKD-----RHERDFVIQPTSEEVVTDLIRGDLKSYRALPKNFYQIQTKFRDERRPR 146

Query: 377 LHGLMRVRGFTQDDAHVF--------CTKEQMFNECLKIHNLIISIYK 416
             G+MR R FT  DA+ F         + + M+    KI + I   Y+
Sbjct: 147 F-GVMRGREFTMKDAYSFDRSADAAGVSYDNMYAAYCKIFDRIGLTYR 193


>gi|57505123|ref|ZP_00371068.1| alanyl-tRNA synthetase [Campylobacter coli RM2228]
 gi|305433060|ref|ZP_07402216.1| alanine--tRNA ligase [Campylobacter coli JV20]
 gi|57019098|gb|EAL55813.1| alanyl-tRNA synthetase [Campylobacter coli RM2228]
 gi|304443761|gb|EFM36418.1| alanine--tRNA ligase [Campylobacter coli JV20]
          Length = 842

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 62/139 (44%), Gaps = 19/139 (13%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEK 124
           D R      HS  H++  A++ I        G ++E +   +DF   +  S +EL  IEK
Sbjct: 540 DKREQTARHHSATHLLHHALREILGSHISQAGSLVESNKLRFDFTHHKALSKEELESIEK 599

Query: 125 KMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           ++ E+I   S  + + +  E A++     LF  K +              NV +   GE 
Sbjct: 600 RVNEMIISSSEAILENMPLEDAKKSGAIALFNEKYQG-------------NVRVLTLGES 646

Query: 180 FDLCRGPHVRSTGQVKKFF 198
            +LC G HV++T Q+  F+
Sbjct: 647 KELCGGTHVKNTAQIGSFY 665


>gi|309792694|ref|ZP_07687145.1| prolyl-tRNA synthetase [Oscillochloris trichoides DG6]
 gi|308225243|gb|EFO79020.1| prolyl-tRNA synthetase [Oscillochloris trichoides DG6]
          Length = 480

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 89/392 (22%), Positives = 163/392 (41%), Gaps = 63/392 (16%)

Query: 249 LAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQH-LWQ 306
           + RE DL  +AE   G I +   GW I++ +   +  +IK+  +  +  P ++ +  + +
Sbjct: 20  IVREADLAEVAEVVRGCIVFKPTGWAIWEMMQRALDDRIKETGHSNVQFPLLIPKSFIMK 79

Query: 307 QSGHWDSYRANMFAVKCADDTIKDL-RTFALKPMN--CPGHVAVFNHGLKSYRELPVRLA 363
           ++ H D +   +  V  A    +DL   + ++P +    GH   ++  ++SYR+LP+   
Sbjct: 80  EAEHVDGFAPEVAEVTRAGG--EDLTEPYVIRPTSETIIGH--FYSKWIRSYRDLPLLYN 135

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE-QMFNECLKIHNLIISIYKDFGFEK 422
           ++ +V R E        +R   F   + H     E +   E LKI   +  +Y DF  E+
Sbjct: 136 QWCNVMRWE--MRTRPFLRTSEFIWQEGHTAHVNEAEAEAETLKI---LHEVYADFA-EQ 189

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           +M                   A  +++G+      +  ++         GA      E +
Sbjct: 190 VM-------------------AVPVIRGL-----KTENEKF-------PGALRSYCIEAM 218

Query: 483 LKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
           ++D  GR  Q GT   +  N    F   Y + ++   H        +G   R IG +I  
Sbjct: 219 MQD--GRALQAGTSHNLGQNFAKAFEITYTDHNNTVQHAWTTS---WGVSTRLIGALIMT 273

Query: 542 FKGN----LPLWLSPIQAIVTTITSSAVEYAQEIANL--LKSHH---LSIETDFR-NETI 591
              +    +P  L+PIQ +V  I  +  E  + +A +  L S     L  + D R N + 
Sbjct: 274 HSDDEGLVIPPRLAPIQVVVVPIFKNDAEREKVMATVHALTSTWKGVLRFKIDDRDNLSP 333

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRR 623
            +K  E  +K +P+ I  G K+  + S+ I R
Sbjct: 334 GFKFNEWEMKGVPVRIEVGPKDVEKGSVAIAR 365


>gi|331016426|gb|EGH96482.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str.
           M302278PT]
          Length = 544

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 7/133 (5%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG+  W   G ++ + + + +R ++      EI  P +    LWQ+SG W+ Y   +  +
Sbjct: 37  SGLYTWLPMGLRVLRKVEAIVREEMNAAGALEILMPGIQPAELWQESGRWEQYGPEL--M 94

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           +  D   +  R F L P +      +  + L SY++LP+ + +  + +R+E      GLM
Sbjct: 95  RLVD---RHNREFCLGPTHEEVITDLARNELNSYKQLPINMYQIQTKFRDEIRPRF-GLM 150

Query: 382 RVRGFTQDDAHVF 394
           R R F   DA+ F
Sbjct: 151 RGREFVMKDAYSF 163


>gi|228986962|ref|ZP_04147088.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
 gi|228772740|gb|EEM21180.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
          Length = 566

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 79/166 (47%), Gaps = 10/166 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R ++ +    E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K      ++ R FAL   +      +    +KSY++L
Sbjct: 74  MQAAELWQESGRWYSYGSELMRMKD-----RNAREFALGATHEEVITDLVRDEVKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           P+ L +  + +R+E      GL+R R F   DA+ F   ++  +E 
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEV 173


>gi|163868357|ref|YP_001609566.1| prolyl-tRNA synthetase [Bartonella tribocorum CIP 105476]
 gi|189083488|sp|A9IUL1|SYP_BART1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|161018013|emb|CAK01571.1| Prolyl-tRNA synthetase [Bartonella tribocorum CIP 105476]
          Length = 441

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/170 (28%), Positives = 75/170 (44%), Gaps = 15/170 (8%)

Query: 231 LTQYLYFL-----EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
           L+QY   L     +E+E   HR + R      I +  SG+  W   G K+   +   +R 
Sbjct: 3   LSQYFLPLLKENPKEAEIVSHRFMLRAG---MIRQQTSGIYSWLPLGKKVLDKVCKIIRE 59

Query: 286 -KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
            + +    EI  P +    LW++SG +D Y   M  +K  D   +DL      P N    
Sbjct: 60  EQERAGAIEILMPTIQSADLWRESGRYDDYGLEMLRIK--DRQKRDL---LYGPTNEEMV 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
             +F   ++SY++LP+ L      +R+E      G+MR R F   DA+ F
Sbjct: 115 TDIFRSYVRSYKDLPLNLYHIQWKFRDEIRPRF-GVMRAREFLMKDAYSF 163


>gi|301055309|ref|YP_003793520.1| prolyl-tRNA synthetase [Bacillus anthracis CI]
 gi|300377478|gb|ADK06382.1| prolyl-tRNA synthetase [Bacillus cereus biovar anthracis str. CI]
          Length = 566

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 79/166 (47%), Gaps = 10/166 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R ++ +    E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K      ++ R FAL   +      +    +KSY++L
Sbjct: 74  MQAAELWQESGRWYSYGSELMRMKD-----RNAREFALGATHEEVITDLVRDEVKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           P+ L +  + +R+E      GL+R R F   DA+ F   ++  +E 
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEV 173


>gi|300728304|ref|ZP_07061670.1| phosphoribulokinase family protein [Prevotella bryantii B14]
 gi|299774416|gb|EFI71042.1| phosphoribulokinase family protein [Prevotella bryantii B14]
          Length = 556

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/118 (27%), Positives = 60/118 (50%), Gaps = 1/118 (0%)

Query: 80  IMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQ 139
           ++ +AV  ++P   V I   + +G+Y D + EQP + + +A+I ++MQEII    P    
Sbjct: 85  VLCKAVHDLYPISLVIIDIPVSNGYYVDVEMEQPITPEVVARIRQRMQEIIDAGIPVKHH 144

Query: 140 YLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
            +  E+A  +F  K +  K ++L S+  +   T Y   ++ D   G  + +T  +  F
Sbjct: 145 EVLTEEAYRMFRDKGDKAKAKLLSSV-GRLYTTYYSIDDYVDYYYGSLLPNTKDLYLF 201


>gi|228935133|ref|ZP_04097960.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228824498|gb|EEM70303.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
          Length = 566

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 79/166 (47%), Gaps = 10/166 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R ++ +    E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K      ++ R FAL   +      +    +KSY++L
Sbjct: 74  MQAAELWQESGRWYSYGSELMRMKD-----RNAREFALGATHEEVITDLVRDEVKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           P+ L +  + +R+E      GL+R R F   DA+ F   ++  +E 
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEV 173


>gi|196036918|ref|ZP_03104302.1| prolyl-tRNA synthetase [Bacillus cereus W]
 gi|195990473|gb|EDX54457.1| prolyl-tRNA synthetase [Bacillus cereus W]
          Length = 566

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 79/166 (47%), Gaps = 10/166 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R ++ +    E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K      ++ R FAL   +      +    +KSY++L
Sbjct: 74  MQAAELWQESGRWYSYGSELMRMKD-----RNAREFALGATHEEVITDLVRDEVKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           P+ L +  + +R+E      GL+R R F   DA+ F   ++  +E 
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEV 173


>gi|49481697|ref|YP_037880.1| prolyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|81395110|sp|Q6HEZ6|SYP1_BACHK RecName: Full=Prolyl-tRNA synthetase 1; AltName: Full=Proline--tRNA
           ligase 1; Short=ProRS 1
 gi|49333253|gb|AAT63899.1| proline--tRNA ligase (prolyl-tRNA synthetase) [Bacillus
           thuringiensis serovar konkukian str. 97-27]
          Length = 566

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 79/166 (47%), Gaps = 10/166 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R ++ +    E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K      ++ R FAL   +      +    +KSY++L
Sbjct: 74  MQAAELWQESGRWYSYGSELMRMKD-----RNAREFALGATHEEVITDLVRDEVKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           P+ L +  + +R+E      GL+R R F   DA+ F   ++  +E 
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEV 173


>gi|52141669|ref|YP_085160.1| prolyl-tRNA synthetase [Bacillus cereus E33L]
 gi|81686584|sp|Q636K7|SYP1_BACCZ RecName: Full=Prolyl-tRNA synthetase 1; AltName: Full=Proline--tRNA
           ligase 1; Short=ProRS 1
 gi|51975138|gb|AAU16688.1| proline--tRNA ligase (prolyl-tRNA synthetase) [Bacillus cereus
           E33L]
          Length = 566

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 79/166 (47%), Gaps = 10/166 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R ++ +    E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K      ++ R FAL   +      +    +KSY++L
Sbjct: 74  MQAAELWQESGRWYSYGSELMRMKD-----RNAREFALGATHEEVITDLVRDEVKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           P+ L +  + +R+E      GL+R R F   DA+ F   ++  +E 
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEV 173


>gi|333029615|ref|ZP_08457676.1| phosphoribulokinase/uridine kinase [Bacteroides coprosuis DSM
           18011]
 gi|332740212|gb|EGJ70694.1| phosphoribulokinase/uridine kinase [Bacteroides coprosuis DSM
           18011]
          Length = 557

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/189 (19%), Positives = 87/189 (46%), Gaps = 3/189 (1%)

Query: 15  KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVI 73
           ++FP+ +T  ++ +        + V+  +N ++  L   V     +E +   D  ++   
Sbjct: 16  RDFPIGSTLLEIYKGFKLDFKHQVVSAKVNNRIEGLRYKVYNNKDVEFLDVRDSSAMRTY 75

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
             S   ++ +A + ++P  ++ +   +  G++ + +  +  + +++  ++K+MQEII  D
Sbjct: 76  VRSLCFVLYKAARELFPSSKLYVEHPVSKGYFCNLEIGREITLEDIDLLKKRMQEIIDAD 135

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQ 193
            P+ ++    + A +LF  +    KV +LE+         Y  G   D   G  + S+G 
Sbjct: 136 IPYYRKECRTKDAMKLFAEEGMTDKVRLLET-SGSIYTYYYELGGTIDYYYGNLLPSSGF 194

Query: 194 VKKFFKLMK 202
           +   F +MK
Sbjct: 195 I-NVFDIMK 202


>gi|228922573|ref|ZP_04085873.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228837002|gb|EEM82343.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 566

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 79/166 (47%), Gaps = 10/166 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R ++ +    E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K      ++ R FAL   +      +    +KSY++L
Sbjct: 74  MQAAELWQESGRWYSYGSELMRMKD-----RNAREFALGATHEEVITDLVRDEVKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           P+ L +  + +R+E      GL+R R F   DA+ F   ++  +E 
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEV 173


>gi|120602767|ref|YP_967167.1| prolyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
 gi|152112308|sp|A1VE74|SYP_DESVV RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|120562996|gb|ABM28740.1| prolyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
          Length = 574

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/169 (23%), Positives = 77/169 (45%), Gaps = 15/169 (8%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG+  +   G +    + + +R ++ +   +E+  P V    LWQ++G W+ Y   +   
Sbjct: 37  SGIYTFMPMGLRALNKVAAIVREEMNRAGAQEVLMPMVQPADLWQETGRWEFYGKELLRF 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           +  +D     R + L P +      +    ++SYR+LP+ L +  + +R+E      GLM
Sbjct: 97  RDRND-----RDYCLGPTHEEVITDLVRGEVRSYRQLPINLYQIQTKFRDEIRPRF-GLM 150

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR 430
           R R F   DA+ F   +   +E  K      ++Y    +++I  +L  R
Sbjct: 151 RGREFVMKDAYSFDRDQAGCDESYK------AMYT--AYQRIFSRLGLR 191


>gi|28871133|ref|NP_793752.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|81840044|sp|Q87Y24|SYP_PSESM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|28854383|gb|AAO57447.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. tomato str.
           DC3000]
          Length = 571

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 7/133 (5%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG+  W   G ++ + + + +R ++      EI  P +    LWQ+SG W+ Y   +  +
Sbjct: 37  SGLYTWLPMGLRVLRKVEAIVREEMNAVGALEILMPGIQPAELWQESGRWEQYGPEL--M 94

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           +  D   +  R F L P +      +  + L SY++LP+ + +  + +R+E      GLM
Sbjct: 95  RLVD---RHNREFCLGPTHEEVITDLARNELNSYKQLPINMYQIQTKFRDEIRPRF-GLM 150

Query: 382 RVRGFTQDDAHVF 394
           R R F   DA+ F
Sbjct: 151 RGREFVMKDAYSF 163


>gi|30021908|ref|NP_833539.1| prolyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|81433856|sp|Q819Y4|SYP1_BACCR RecName: Full=Prolyl-tRNA synthetase 1; AltName: Full=Proline--tRNA
           ligase 1; Short=ProRS 1
 gi|29897464|gb|AAP10740.1| Prolyl-tRNA synthetase [Bacillus cereus ATCC 14579]
          Length = 566

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 79/166 (47%), Gaps = 10/166 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R ++ +    E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K      ++ R FAL   +      +    +KSY++L
Sbjct: 74  MQAAELWQESGRWYSYGSELMRMKD-----RNAREFALGATHEEVITDLVRDEVKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           P+ L +  + +R+E      GL+R R F   DA+ F   ++  +E 
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEV 173


>gi|228940907|ref|ZP_04103466.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228973836|ref|ZP_04134412.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228980425|ref|ZP_04140735.1| Prolyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228779245|gb|EEM27502.1| Prolyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228785861|gb|EEM33864.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228818743|gb|EEM64809.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|326941586|gb|AEA17482.1| prolyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 566

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 79/166 (47%), Gaps = 10/166 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R ++ +    E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K      ++ R FAL   +      +    +KSY++L
Sbjct: 74  MQAAELWQESGRWYSYGSELMRMKD-----RNAREFALGATHEEVITDLVRDEVKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           P+ L +  + +R+E      GL+R R F   DA+ F   ++  +E 
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEV 173


>gi|229180095|ref|ZP_04307439.1| Prolyl-tRNA synthetase [Bacillus cereus 172560W]
 gi|228603304|gb|EEK60781.1| Prolyl-tRNA synthetase [Bacillus cereus 172560W]
          Length = 566

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 79/166 (47%), Gaps = 10/166 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R ++ +    E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K      ++ R FAL   +      +    +KSY++L
Sbjct: 74  MQAAELWQESGRWYSYGSELMRMKD-----RNAREFALGATHEEVITDLVRDEVKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           P+ L +  + +R+E      GL+R R F   DA+ F   ++  +E 
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEV 173


>gi|332796853|ref|YP_004458353.1| prolyl-tRNA synthetase [Acidianus hospitalis W1]
 gi|332694588|gb|AEE94055.1| prolyl-tRNA synthetase [Acidianus hospitalis W1]
          Length = 481

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 96/421 (22%), Positives = 170/421 (40%), Gaps = 89/421 (21%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHLW-QQSGHWDSYRANMFAV 321
           G+  W   G+KI Q +I+ +R+ + +  +EE+  P ++ ++L  ++S H   +   ++ V
Sbjct: 35  GMGVWMPYGFKIRQNVINIIRKFLDETGHEEVLFPLLIPEYLLRKESEHIKGFEGEVYWV 94

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
               +   D+R  AL+P +      + +  +KSY+ELP +  +  S++R E   +   ++
Sbjct: 95  TKGGEEDLDIR-LALRPTSEVAITYMESLWIKSYKELPKKYYQIVSIFRYETKAT-RPMI 152

Query: 382 RVRGFTQ-DDAHV----FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
           R+R  T   +AH     +   E+   E ++I+     I+   G   I   LS RPE    
Sbjct: 153 RLREVTTFKEAHTLHVSYEDAERQVKEAIEIYK---KIFDTLGIPYI---LSERPE---- 202

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
               WD                             GA +   F+ ++ D  GR  Q GT+
Sbjct: 203 ----WDRF--------------------------AGAEHTYAFDTLMPD--GRALQIGTV 230

Query: 497 QVDFNLPSRFNAFYVNSHSEKCHPVMIHRA----------VFGSIERFIGIMIE-NFKGN 545
                        ++  H  K     I +A           +G  +R I + I  N   +
Sbjct: 231 H------------HLGQHFTKALDYKIQKADGSLDYPYQTSYGISDRVIAVSIAVNGDDH 278

Query: 546 LPLW---LSPIQAIVTTITSSAVE-------YAQEIANLLKSHHLSIETDFRNE-TINYK 594
            P+    ++PI+ ++  I +   E       Y +EI   L S  +S   D   E T   K
Sbjct: 279 GPILNPIIAPIKVVIIPIPAKTEEDNKRVENYCKEIQEKLSSAGISAVVDSDKEKTPGEK 338

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRR---FGSTTTQKVSLLDAIPILTKESLPPDCQ 651
                +K +P+ I  G +E +  +I I+R     S   +K  L+  +  L   SL  D +
Sbjct: 339 FYYWEMKGVPLRIEIGLREVNNETITIKRRDTLESKIVKKDELIKTVNDLLS-SLSEDLK 397

Query: 652 K 652
           K
Sbjct: 398 K 398


>gi|229159541|ref|ZP_04287556.1| Prolyl-tRNA synthetase 2 [Bacillus cereus R309803]
 gi|228623946|gb|EEK80757.1| Prolyl-tRNA synthetase 2 [Bacillus cereus R309803]
          Length = 502

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 91/448 (20%), Positives = 174/448 (38%), Gaps = 62/448 (13%)

Query: 212 SNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRK 271
             R  L  + G      +E  Q +  +EE   + +  + ++ +L   +    G +     
Sbjct: 12  GTRAFLYFLEGGRLTMAKEQVQAITKMEEDFAQWYTDIVKKAELVDYS-SVKGCMILRPY 70

Query: 272 GWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIK 329
           G+ +++ +   M  K+K   +E +  P  + + L Q +  H + +   +  V    D  K
Sbjct: 71  GYALWENMQKVMDEKLKATGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGDE-K 129

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
                 ++P +       F+  ++SY +LP    ++ SV R E +      +R   F   
Sbjct: 130 LAERLCVRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKT--TRPFLRTTEFLWQ 187

Query: 390 DAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIM 448
           + H +  T E+   E L I NL  S  +D+    ++    T  EK  G+ A +       
Sbjct: 188 EGHTIHETAEESQAETLNILNLYASFCEDYLAIPVIKGQKTDKEKFAGAKATY------- 240

Query: 449 KGVLDTIKNSSQD--RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF 506
                TI++   D   + TG     G  +   F+    D  G+ WQ              
Sbjct: 241 -----TIESLMHDGKALQTGTSHNFGTNFSEAFDIKFLDRNGK-WQ-------------- 280

Query: 507 NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTITS 562
                           +H+  +G   R IG +I     N    +P  ++P+Q ++  I  
Sbjct: 281 ---------------YVHQTSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQVVIVPIAQ 325

Query: 563 ---SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSI 619
                +E A E+   ++ +   ++ D  N+T  +K  E+ +K IPI +  G K+  +  +
Sbjct: 326 HKEGVLEKATELQGRIQ-NVARVKVDVSNKTPGWKFNEYEMKGIPIRLEVGPKDIEKNQV 384

Query: 620 GIRRFGSTTTQKVS---LLDAIPILTKE 644
            + R  +   + +S   L + IP L +E
Sbjct: 385 VLVRRDTKEKEFISMDQLEERIPSLLEE 412


>gi|229162755|ref|ZP_04290712.1| Prolyl-tRNA synthetase [Bacillus cereus R309803]
 gi|228620637|gb|EEK77506.1| Prolyl-tRNA synthetase [Bacillus cereus R309803]
          Length = 566

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 79/166 (47%), Gaps = 10/166 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R ++ +    E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K      ++ R FAL   +      +    +KSY++L
Sbjct: 74  MQAAELWQESGRWYSYGSELMRMKD-----RNAREFALGATHEEVITDLVRDEVKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           P+ L +  + +R+E      GL+R R F   DA+ F   ++  +E 
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEV 173


>gi|229197929|ref|ZP_04324645.1| Prolyl-tRNA synthetase [Bacillus cereus m1293]
 gi|228585647|gb|EEK43749.1| Prolyl-tRNA synthetase [Bacillus cereus m1293]
          Length = 566

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 79/166 (47%), Gaps = 10/166 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R ++ +    E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K      ++ R FAL   +      +    +KSY++L
Sbjct: 74  MQAAELWQESGRWYSYGSELMRMKD-----RNAREFALGATHEEVITDLVRDEVKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           P+ L +  + +R+E      GL+R R F   DA+ F   ++  +E 
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEV 173


>gi|30263823|ref|NP_846200.1| prolyl-tRNA synthetase [Bacillus anthracis str. Ames]
 gi|47529247|ref|YP_020596.1| prolyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49186669|ref|YP_029921.1| prolyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|65321146|ref|ZP_00394105.1| COG0442: Prolyl-tRNA synthetase [Bacillus anthracis str. A2012]
 gi|118479041|ref|YP_896192.1| prolyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|165872601|ref|ZP_02217232.1| prolyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167635829|ref|ZP_02394138.1| prolyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|167639857|ref|ZP_02398126.1| prolyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|170687854|ref|ZP_02879068.1| prolyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|170706810|ref|ZP_02897268.1| prolyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|177652150|ref|ZP_02934696.1| prolyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190568409|ref|ZP_03021316.1| prolyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|196042144|ref|ZP_03109427.1| proline--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|196044700|ref|ZP_03111935.1| prolyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|218904947|ref|YP_002452781.1| prolyl-tRNA synthetase [Bacillus cereus AH820]
 gi|225865800|ref|YP_002751178.1| prolyl-tRNA synthetase [Bacillus cereus 03BB102]
 gi|227813273|ref|YP_002813282.1| prolyl-tRNA synthetase [Bacillus anthracis str. CDC 684]
 gi|228916456|ref|ZP_04080022.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|228928867|ref|ZP_04091899.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228947538|ref|ZP_04109828.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|229092859|ref|ZP_04223993.1| Prolyl-tRNA synthetase [Bacillus cereus Rock3-42]
 gi|229123332|ref|ZP_04252536.1| Prolyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|229186058|ref|ZP_04313228.1| Prolyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
 gi|229602364|ref|YP_002868057.1| proline--tRNA ligase [Bacillus anthracis str. A0248]
 gi|254683474|ref|ZP_05147334.1| prolyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066]
 gi|254721995|ref|ZP_05183784.1| prolyl-tRNA synthetase [Bacillus anthracis str. A1055]
 gi|254735857|ref|ZP_05193563.1| prolyl-tRNA synthetase [Bacillus anthracis str. Western North
           America USA6153]
 gi|254739617|ref|ZP_05197311.1| prolyl-tRNA synthetase [Bacillus anthracis str. Kruger B]
 gi|254756010|ref|ZP_05208041.1| prolyl-tRNA synthetase [Bacillus anthracis str. Vollum]
 gi|254759329|ref|ZP_05211354.1| prolyl-tRNA synthetase [Bacillus anthracis str. Australia 94]
 gi|81583682|sp|Q81WL6|SYP1_BACAN RecName: Full=Prolyl-tRNA synthetase 1; AltName: Full=Proline--tRNA
           ligase 1; Short=ProRS 1
 gi|152074739|sp|A0RHJ2|SYP1_BACAH RecName: Full=Prolyl-tRNA synthetase 1; AltName: Full=Proline--tRNA
           ligase 1; Short=ProRS 1
 gi|226731426|sp|B7JJ97|SYP_BACC0 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|254782882|sp|C3P5M1|SYP_BACAA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|254782883|sp|C3L7A8|SYP_BACAC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|254782884|sp|C1EP43|SYP_BACC3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|30258467|gb|AAP27686.1| proline--tRNA ligase [Bacillus anthracis str. Ames]
 gi|47504395|gb|AAT33071.1| prolyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49180596|gb|AAT55972.1| prolyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|118418266|gb|ABK86685.1| proline--tRNA ligase [Bacillus thuringiensis str. Al Hakam]
 gi|164711633|gb|EDR17179.1| prolyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167512258|gb|EDR87635.1| prolyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|167528786|gb|EDR91544.1| prolyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|170128228|gb|EDS97097.1| prolyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|170668170|gb|EDT18919.1| prolyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|172082519|gb|EDT67584.1| prolyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190560413|gb|EDV14391.1| prolyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|196024735|gb|EDX63407.1| prolyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|196026996|gb|EDX65620.1| proline--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|218535709|gb|ACK88107.1| prolyl-tRNA synthetase [Bacillus cereus AH820]
 gi|225789269|gb|ACO29486.1| proline--tRNA ligase [Bacillus cereus 03BB102]
 gi|227007610|gb|ACP17353.1| proline--tRNA ligase [Bacillus anthracis str. CDC 684]
 gi|228597477|gb|EEK55127.1| Prolyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
 gi|228660108|gb|EEL15744.1| Prolyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|228690481|gb|EEL44264.1| Prolyl-tRNA synthetase [Bacillus cereus Rock3-42]
 gi|228812058|gb|EEM58389.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228830674|gb|EEM76279.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228843035|gb|EEM88117.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|229266772|gb|ACQ48409.1| proline--tRNA ligase [Bacillus anthracis str. A0248]
          Length = 566

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 79/166 (47%), Gaps = 10/166 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R ++ +    E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K      ++ R FAL   +      +    +KSY++L
Sbjct: 74  MQAAELWQESGRWYSYGSELMRMKD-----RNAREFALGATHEEVITDLVRDEVKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           P+ L +  + +R+E      GL+R R F   DA+ F   ++  +E 
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEV 173


>gi|228960035|ref|ZP_04121699.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228799551|gb|EEM46504.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
          Length = 566

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 79/166 (47%), Gaps = 10/166 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R ++ +    E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K      ++ R FAL   +      +    +KSY++L
Sbjct: 74  MQAAELWQESGRWYSYGSELMRMKD-----RNAREFALGATHEEVITDLVRDEVKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           P+ L +  + +R+E      GL+R R F   DA+ F   ++  +E 
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEV 173


>gi|206972654|ref|ZP_03233595.1| prolyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|206732411|gb|EDZ49592.1| prolyl-tRNA synthetase [Bacillus cereus AH1134]
          Length = 566

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 79/166 (47%), Gaps = 10/166 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R ++ +    E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K      ++ R FAL   +      +    +KSY++L
Sbjct: 74  MQAAELWQESGRWYSYGSELMRMKD-----RNAREFALGATHEEVITDLVRDEVKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           P+ L +  + +R+E      GL+R R F   DA+ F   ++  +E 
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEV 173


>gi|170290808|ref|YP_001737624.1| prolyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum OPF8]
 gi|170174888|gb|ACB07941.1| prolyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum OPF8]
          Length = 479

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 77/378 (20%), Positives = 160/378 (42%), Gaps = 67/378 (17%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHLWQQSGHW-DSYRANMFAV 321
           G+  W   G+++ + ++S M R ++   ++ +  P ++ + +  +   +   ++ ++F +
Sbjct: 38  GMYVWLPYGYELMENIMSIMERLLRQTGHKRVYFPSIVPESVLSREFRFIKGFQDSVFWI 97

Query: 322 K--CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHG 379
                 D  + L   AL+P +      V +  + SYR+LP+R+ +   +YR E   +   
Sbjct: 98  TKLGRQDAPEKL---ALRPTSEAIMYEVLSRWISSYRDLPIRIYQIAPIYRYETKAT-RP 153

Query: 380 LMRVRGFT-QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK---LSTRPEKRV 435
           ++RVR      + H F      + E ++  NL + IYK F +++++V    + T P    
Sbjct: 154 MLRVREVAFFKEGHTF---HATYEEAVEQVNLEVWIYKSF-YDELLVPYIVVKTLP---- 205

Query: 436 GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGT 495
                WD                             GA Y      I+ D  G+  + G+
Sbjct: 206 -----WDTF--------------------------PGALYNYDIVTIMPD--GKALELGS 232

Query: 496 IQVDFNLPSR-FNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWL 550
                +L +R ++  Y++   ++ +   ++   FG  ER +  +I    ++    LP  +
Sbjct: 233 AINFGDLFARTYDLTYMDEDGQRKN---VNTTSFGISERSLAAVIAIHGDDRGLRLPPKI 289

Query: 551 SPIQAIVTTITSS-----AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPI 605
           +PIQ ++  I +       +EY++E+ + L+     +  D   E   YK  +  +K +PI
Sbjct: 290 APIQIVIVPIPTKDYEERIMEYSREVKSTLE-RSFRVHLDESEERPGYKFYKWEMKGVPI 348

Query: 606 IIICGDKEASERSIGIRR 623
            I  G  E   R + + R
Sbjct: 349 RIEIGRNELERREVTVFR 366


>gi|150009740|ref|YP_001304483.1| uridine kinase [Parabacteroides distasonis ATCC 8503]
 gi|255012969|ref|ZP_05285095.1| uridine kinase [Bacteroides sp. 2_1_7]
 gi|298374139|ref|ZP_06984097.1| phosphoribulokinase family protein [Bacteroides sp. 3_1_19]
 gi|149938164|gb|ABR44861.1| uridine kinase [Parabacteroides distasonis ATCC 8503]
 gi|298268507|gb|EFI10162.1| phosphoribulokinase family protein [Bacteroides sp. 3_1_19]
          Length = 555

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/190 (23%), Positives = 81/190 (42%), Gaps = 6/190 (3%)

Query: 11  DGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRS 69
           + + K+ P+ ++  D+  ++   L  + +   +N K   L+    +   IE I       
Sbjct: 12  NNTYKDVPIGSSLLDIYTALGAPLRYRPMNAQVNNKTESLNFRCWQPKDIEFIDYTQLSG 71

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           L     S  HI ++AV  IWP   + +   +  G+Y      +    + + +I+K+M E+
Sbjct: 72  LRTYVRSLCHIFSKAVYDIWPTATLNLEHPVSKGYYCVIHNGKNIDLETIERIKKRMWEL 131

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILES--IPAKENVTLYRQGEWFDLCRGPH 187
           I  D PFL + +    A  LF  +    K  ++E+  +P      L     +F  C  P 
Sbjct: 132 IDADLPFLHKSVRTVDAAVLFRERGMNDKARLIETAGLPYTSYYELEGYINFFYGCLTP- 190

Query: 188 VRSTGQVKKF 197
             STG ++ F
Sbjct: 191 --STGYIQLF 198


>gi|42782910|ref|NP_980157.1| prolyl-tRNA synthetase [Bacillus cereus ATCC 10987]
 gi|217961239|ref|YP_002339807.1| prolyl-tRNA synthetase [Bacillus cereus AH187]
 gi|229140460|ref|ZP_04269015.1| Prolyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
 gi|81409464|sp|Q732Q0|SYP1_BACC1 RecName: Full=Prolyl-tRNA synthetase 1; AltName: Full=Proline--tRNA
           ligase 1; Short=ProRS 1
 gi|226731429|sp|B7HLF2|SYP_BACC7 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|42738837|gb|AAS42765.1| prolyl-tRNA synthetase [Bacillus cereus ATCC 10987]
 gi|217063356|gb|ACJ77606.1| prolyl-tRNA synthetase [Bacillus cereus AH187]
 gi|228643021|gb|EEK99297.1| Prolyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
 gi|324327716|gb|ADY22976.1| prolyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 566

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 79/166 (47%), Gaps = 10/166 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R ++ +    E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K      ++ R FAL   +      +    +KSY++L
Sbjct: 74  MQAAELWQESGRWYSYGSELMRMKD-----RNAREFALGATHEEVITDLVRDEVKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           P+ L +  + +R+E      GL+R R F   DA+ F   ++  +E 
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEV 173


>gi|17547535|ref|NP_520937.1| prolyl-tRNA synthetase [Ralstonia solanacearum GMI1000]
 gi|81849506|sp|Q8XVL4|SYP_RALSO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|17429839|emb|CAD16523.1| probable prolyl-trna synthetase protein [Ralstonia solanacearum
           GMI1000]
          Length = 574

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/162 (23%), Positives = 72/162 (44%), Gaps = 8/162 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           G+G+  +   G ++ + +   +R ++      E+  P V    LWQ++G WD     M  
Sbjct: 36  GAGLYTYMPVGLRVIRKVEQIVREEMNASGAVEVLMPVVQPAELWQETGRWDKMGDEMMR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           VK   +     R   ++P +      +    ++SY+++PV   +  + +R+E      G+
Sbjct: 96  VKDRHE-----RDLVIQPTSEEVVTDIARTEIRSYKQMPVNFYQIQTKFRDERRPRF-GI 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFE 421
           MR R FT  DA+ F    +       K++     I++ FG E
Sbjct: 150 MRGREFTMKDAYSFDRDAEGLKVSYEKMYGAYTRIFQRFGLE 191


>gi|229025259|ref|ZP_04181679.1| Prolyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228736012|gb|EEL86587.1| Prolyl-tRNA synthetase [Bacillus cereus AH1272]
          Length = 566

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 79/166 (47%), Gaps = 10/166 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R ++ +    E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K      ++ R FAL   +      +    +KSY++L
Sbjct: 74  MQAAELWQESGRWYSYGSELMRMKD-----RNAREFALGATHEEVITDLVRDEVKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           P+ L +  + +R+E      GL+R R F   DA+ F   ++  +E 
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEV 173


>gi|229129095|ref|ZP_04258068.1| Prolyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|229146390|ref|ZP_04274761.1| Prolyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|296504314|ref|YP_003666014.1| prolyl-tRNA synthetase [Bacillus thuringiensis BMB171]
 gi|228637023|gb|EEK93482.1| Prolyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|228654332|gb|EEL10197.1| Prolyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|296325366|gb|ADH08294.1| prolyl-tRNA synthetase [Bacillus thuringiensis BMB171]
          Length = 566

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 79/166 (47%), Gaps = 10/166 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R ++ +    E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K      ++ R FAL   +      +    +KSY++L
Sbjct: 74  MQAAELWQESGRWYSYGSELMRMKD-----RNAREFALGATHEEVITDLVRDEVKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           P+ L +  + +R+E      GL+R R F   DA+ F   ++  +E 
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEV 173


>gi|71736091|ref|YP_275923.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|257487021|ref|ZP_05641062.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC 11528]
 gi|298488219|ref|ZP_07006255.1| Prolyl-tRNA synthetase [Pseudomonas savastanoi pv. savastanoi NCPPB
           3335]
 gi|114152230|sp|Q48FB4|SYP_PSE14 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|71556644|gb|AAZ35855.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|298157277|gb|EFH98361.1| Prolyl-tRNA synthetase [Pseudomonas savastanoi pv. savastanoi NCPPB
           3335]
 gi|320323063|gb|EFW79152.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
           B076]
 gi|320329665|gb|EFW85654.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str. race
           4]
 gi|330892229|gb|EGH24890.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. mori str. 301020]
 gi|330988958|gb|EGH87061.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str.
           M301315]
 gi|331009335|gb|EGH89391.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 571

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 64/134 (47%), Gaps = 7/134 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++      EI  P +    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYTWLPMGLRVLRKVEAIVREEMDAAGALEILMPGIQPAELWQESGRWEQYGPEL-- 93

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           ++  D   +  R F L P +      +  + L SY++LP+ + +  + +R+E      GL
Sbjct: 94  MRLVD---RHNREFCLGPTHEEVITDLARNELNSYKQLPINMYQIQTKFRDEIRPRF-GL 149

Query: 381 MRVRGFTQDDAHVF 394
           MR R F   DA+ F
Sbjct: 150 MRGREFVMKDAYSF 163


>gi|330877991|gb|EGH12140.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str. race
           4]
          Length = 412

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 64/134 (47%), Gaps = 7/134 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++      EI  P +    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYTWLPMGLRVLRKVEAIVREEMDAAGALEILMPGIQPAELWQESGRWEQYGPEL-- 93

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           ++  D   +  R F L P +      +  + L SY++LP+ + +  + +R+E      GL
Sbjct: 94  MRLVD---RHNREFCLGPTHEEVITDLARNELNSYKQLPINMYQIQTKFRDEIRPRF-GL 149

Query: 381 MRVRGFTQDDAHVF 394
           MR R F   DA+ F
Sbjct: 150 MRGREFVMKDAYSF 163


>gi|229152018|ref|ZP_04280213.1| Prolyl-tRNA synthetase [Bacillus cereus m1550]
 gi|228631367|gb|EEK88001.1| Prolyl-tRNA synthetase [Bacillus cereus m1550]
          Length = 566

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 79/166 (47%), Gaps = 10/166 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R ++ +    E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K      ++ R FAL   +      +    +KSY++L
Sbjct: 74  MQAAELWQESGRWYSYGSELMRMKD-----RNAREFALGATHEEVITDLVRDEVKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           P+ L +  + +R+E      GL+R R F   DA+ F   ++  +E 
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEV 173


>gi|229174485|ref|ZP_04302017.1| Prolyl-tRNA synthetase [Bacillus cereus MM3]
 gi|228609045|gb|EEK66335.1| Prolyl-tRNA synthetase [Bacillus cereus MM3]
          Length = 566

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 79/166 (47%), Gaps = 10/166 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R ++ +    E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K      ++ R FAL   +      +    +KSY++L
Sbjct: 74  MQAAELWQESGRWYSYGSELMRMKD-----RNAREFALGATHEEVITDLVRDEVKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           P+ L +  + +R+E      GL+R R F   DA+ F   ++  +E 
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEV 173


>gi|229047505|ref|ZP_04193095.1| Prolyl-tRNA synthetase [Bacillus cereus AH676]
 gi|229081074|ref|ZP_04213584.1| Prolyl-tRNA synthetase [Bacillus cereus Rock4-2]
 gi|229111290|ref|ZP_04240843.1| Prolyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|229191988|ref|ZP_04318958.1| Prolyl-tRNA synthetase [Bacillus cereus ATCC 10876]
 gi|228591539|gb|EEK49388.1| Prolyl-tRNA synthetase [Bacillus cereus ATCC 10876]
 gi|228672066|gb|EEL27357.1| Prolyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|228702118|gb|EEL54594.1| Prolyl-tRNA synthetase [Bacillus cereus Rock4-2]
 gi|228723752|gb|EEL75107.1| Prolyl-tRNA synthetase [Bacillus cereus AH676]
          Length = 566

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 79/166 (47%), Gaps = 10/166 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R ++ +    E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K      ++ R FAL   +      +    +KSY++L
Sbjct: 74  MQAAELWQESGRWYSYGSELMRMKD-----RNAREFALGATHEEVITDLVRDEVKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           P+ L +  + +R+E      GL+R R F   DA+ F   ++  +E 
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEV 173


>gi|212636240|ref|YP_002312765.1| prolyl-tRNA synthetase [Shewanella piezotolerans WP3]
 gi|212557724|gb|ACJ30178.1| Prolyl-tRNA synthetase, bacterial [Shewanella piezotolerans WP3]
          Length = 596

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/148 (24%), Positives = 69/148 (46%), Gaps = 7/148 (4%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I  + SG+  W   G ++ + + + +R ++ K    EI  P V    LWQ++G +D +  
Sbjct: 58  IRRNASGLYSWLPTGLRVLRKIEAIVREEMNKAGSVEILMPMVQPADLWQETGRFDKFGP 117

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            +   +   +     R F L P +      +    + SY++LP+ L +  + +R+E    
Sbjct: 118 ELLRFQDRHN-----RDFVLGPTHEEVITDIVRKEVNSYKQLPLNLYQIQTKFRDEVRPR 172

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             G+MR R F   DA+ F  +++  +E 
Sbjct: 173 F-GVMRSREFLMKDAYSFHLEQECMDET 199


>gi|196018718|ref|XP_002118857.1| hypothetical protein TRIADDRAFT_62857 [Trichoplax adhaerens]
 gi|190577957|gb|EDV18657.1| hypothetical protein TRIADDRAFT_62857 [Trichoplax adhaerens]
          Length = 510

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/159 (24%), Positives = 69/159 (43%), Gaps = 19/159 (11%)

Query: 47  VCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFY 105
           VC  +D      ++ +   + R+L    HS  HI+  A++ I  +     G ++  D   
Sbjct: 242 VCLKNDISIGDEVKFLVDYNLRNLIKANHSATHILHFALREILGKHVTQKGSLVSYDKLR 301

Query: 106 YDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVE 160
           +DF   +  + DE+  +EK++  II  +S      +S + A++     LF  K +     
Sbjct: 302 FDFAHNKAMTKDEIINVEKRVNSIIMLNSSISTNLMSIDAAKKSGAMALFGEKYD----- 356

Query: 161 ILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFK 199
                   E V +   GE  +LC G  V++TG +K   K
Sbjct: 357 --------EEVRVVSMGESIELCGGTRVKNTGDIKDLAK 387


>gi|309378830|emb|CBX22535.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 570

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 9/141 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I  + SG+  W   G ++ + + + +R ++ +    E+  P V    LWQ+SG W+ Y  
Sbjct: 32  IKANASGLYTWMPMGLRVLRKVENVVREEMARAGSVELLMPVVQPAELWQESGRWEFYGK 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVA-VFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            +  +K   D     R F + P  C   +A +    + SY++LP       + +R+E   
Sbjct: 92  ELLRLKDRHD-----RDFCMGP-TCEEVIADIVRKEVNSYKQLPKNFYHIQTKFRDEVRP 145

Query: 376 SLHGLMRVRGFTQDDAHVFCT 396
              G+MR R F   DA+ F T
Sbjct: 146 RF-GVMRAREFVMKDAYSFHT 165


>gi|289628621|ref|ZP_06461575.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|289651507|ref|ZP_06482850.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str. 2250]
 gi|330868600|gb|EGH03309.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           0893_23]
          Length = 571

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 64/134 (47%), Gaps = 7/134 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++      EI  P +    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYTWLPMGLRVLRKVEAIVREEMDAAGALEILMPGIQPAELWQESGRWEQYGPEL-- 93

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           ++  D   +  R F L P +      +  + L SY++LP+ + +  + +R+E      GL
Sbjct: 94  MRLVD---RHNREFCLGPTHEEVITDLARNELNSYKQLPINMYQIQTKFRDEIRPRF-GL 149

Query: 381 MRVRGFTQDDAHVF 394
           MR R F   DA+ F
Sbjct: 150 MRGREFVMKDAYSF 163


>gi|222097264|ref|YP_002531321.1| prolyl-tRNA synthetase [Bacillus cereus Q1]
 gi|254782885|sp|B9IVA8|SYP_BACCQ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|221241322|gb|ACM14032.1| prolyl-tRNA synthetase [Bacillus cereus Q1]
          Length = 566

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 79/166 (47%), Gaps = 10/166 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R ++ +    E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K      ++ R FAL   +      +    +KSY++L
Sbjct: 74  MQAAELWQESGRWYSYGSELMRMKD-----RNAREFALGATHEEVITDLVRDEVKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           P+ L +  + +R+E      GL+R R F   DA+ F   ++  +E 
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEV 173


>gi|114319700|ref|YP_741383.1| prolyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
 gi|122312397|sp|Q0AB94|SYP_ALHEH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|114226094|gb|ABI55893.1| prolyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
          Length = 568

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 65/144 (45%), Gaps = 11/144 (7%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           +G+  W   G ++ + +   +R ++ +    E+  P V    LWQ+S  WD Y   +  +
Sbjct: 37  AGLYTWTPLGLRVLRKVEQIVREEMDRAGAHELLMPAVQPAELWQESTRWDKYGPELLRL 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           K      +  R F   P +           +KSYR+LP+ L +  + +R+E      G+M
Sbjct: 97  KD-----RHERDFCFGPTHEEVITDYVRREVKSYRQLPLNLYQIQTKFRDEIRPRF-GVM 150

Query: 382 RVRGFTQDDAHVFCTKEQMFNECL 405
           R R F   DA+ F     + ++CL
Sbjct: 151 RAREFLMKDAYSF----HLDDDCL 170


>gi|229031449|ref|ZP_04187449.1| Prolyl-tRNA synthetase [Bacillus cereus AH1271]
 gi|228729738|gb|EEL80718.1| Prolyl-tRNA synthetase [Bacillus cereus AH1271]
          Length = 566

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 79/166 (47%), Gaps = 10/166 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R ++ +    E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K      ++ R FAL   +      +    +KSY++L
Sbjct: 74  MQAAELWQESGRWYSYGSELMRMKD-----RNAREFALGATHEEVITDLVRDEVKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           P+ L +  + +R+E      GL+R R F   DA+ F   ++  +E 
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEV 173


>gi|228954095|ref|ZP_04116124.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|229071317|ref|ZP_04204540.1| Prolyl-tRNA synthetase [Bacillus cereus F65185]
 gi|228711771|gb|EEL63723.1| Prolyl-tRNA synthetase [Bacillus cereus F65185]
 gi|228805661|gb|EEM52251.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
          Length = 566

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 79/166 (47%), Gaps = 10/166 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R ++ +    E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K      ++ R FAL   +      +    +KSY++L
Sbjct: 74  MQAAELWQESGRWYSYGSELMRMKD-----RNAREFALGATHEEVITDLVRDEVKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           P+ L +  + +R+E      GL+R R F   DA+ F   ++  +E 
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEV 173


>gi|284030961|ref|YP_003380892.1| prolyl-tRNA synthetase [Kribbella flavida DSM 17836]
 gi|283810254|gb|ADB32093.1| prolyl-tRNA synthetase [Kribbella flavida DSM 17836]
          Length = 587

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/213 (22%), Positives = 93/213 (43%), Gaps = 19/213 (8%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R     +I     G+  W   G ++ + +   +R ++     +E+  P 
Sbjct: 19  DAEVPSHKLLVRAG---YIRRTAPGMYTWLPLGLRVLRNVEKIVREEMDAIGAQELVFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L +  ++ +G W  Y  N+F +K  D    D+       +  P H  +F   +K    S
Sbjct: 76  LLPREPYEATGRWTEYGPNLFRLK--DRKGADM-------LLGPTHEEMFTLAVKDLYSS 126

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH-NLIIS 413
           Y++LP+ + +  + YR+E +    G++R R F   D++ F   +        +H    I 
Sbjct: 127 YKDLPLSIYQIQNKYRDE-ARPRAGVLRGREFVMKDSYSFDVDQAGLQASYDLHRKAYIR 185

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
           I+   GF+ ++V+  +       S+     AEN
Sbjct: 186 IFDRLGFDYVIVQAMSGAMGGSASEEFLAVAEN 218


>gi|218235963|ref|YP_002368620.1| prolyl-tRNA synthetase [Bacillus cereus B4264]
 gi|226731428|sp|B7HDU2|SYP_BACC4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|218163920|gb|ACK63912.1| proline--tRNA ligase [Bacillus cereus B4264]
          Length = 566

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 79/166 (47%), Gaps = 10/166 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R ++ +    E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K      ++ R FAL   +      +    +KSY++L
Sbjct: 74  MQAAELWQESGRWYSYGSELMRMKD-----RNAREFALGATHEEVITDLVRDEVKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           P+ L +  + +R+E      GL+R R F   DA+ F   ++  +E 
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEV 173


>gi|66044647|ref|YP_234488.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. syringae B728a]
 gi|81308436|sp|Q4ZWM2|SYP_PSEU2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|63255354|gb|AAY36450.1| Prolyl-tRNA synthetase, bacterial [Pseudomonas syringae pv.
           syringae B728a]
          Length = 571

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 7/133 (5%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG+  W   G ++ + + + +R ++      EI  P +    LWQ+SG W+ Y   +  +
Sbjct: 37  SGLYTWLPMGLRVLRKVEAIVREEMDAAGALEILMPGIQPAELWQESGRWEQYGPEL--M 94

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           +  D   +  R F L P +      +  + L SY++LP+ + +  + +R+E      GLM
Sbjct: 95  RLVD---RHNREFCLGPTHEEVITDLARNELNSYKQLPINMYQIQTKFRDEIRPRF-GLM 150

Query: 382 RVRGFTQDDAHVF 394
           R R F   DA+ F
Sbjct: 151 RGREFVMKDAYSF 163


>gi|254460942|ref|ZP_05074358.1| alanyl-tRNA synthetase [Rhodobacterales bacterium HTCC2083]
 gi|206677531|gb|EDZ42018.1| alanyl-tRNA synthetase [Rhodobacteraceae bacterium HTCC2083]
          Length = 887

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 72/152 (47%), Gaps = 7/152 (4%)

Query: 56  EGSIEIITPEDPRSLAV-IRHSCAHIMAEAVQSIWPEVQVAIGPI-IEDGFYYDFDKEQP 113
           +GS  I+  +  R  A+   HS  H++ EA+++   +     G +  ED   +DF     
Sbjct: 543 KGSAAILEVDHGRRTAIRANHSATHLLHEALRAALGDHVAQRGSLNAEDRLRFDFSHSAA 602

Query: 114 FSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESK--KEAYKVEI-LESIPAKEN 170
            SS++L ++EK +   I +++P   + ++ + AR L       E Y  E+ + S+  +  
Sbjct: 603 LSSEDLIKVEKDVNTYIRQNAPVETRIMTPDDARALGAQALFGEKYGDEVRVVSMGTQAG 662

Query: 171 VTLYRQGEWF--DLCRGPHVRSTGQVKKFFKL 200
                 G+ +  +LC G HVR TG +  F  L
Sbjct: 663 SGKGSNGQTYSLELCGGTHVRQTGDIGAFVLL 694


>gi|229104381|ref|ZP_04235050.1| Prolyl-tRNA synthetase [Bacillus cereus Rock3-28]
 gi|228679079|gb|EEL33287.1| Prolyl-tRNA synthetase [Bacillus cereus Rock3-28]
          Length = 566

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 79/166 (47%), Gaps = 10/166 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R ++ +    E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K      ++ R FAL   +      +    +KSY++L
Sbjct: 74  MQAAELWQESGRWYSYGSELMRMKD-----RNAREFALGATHEEVITDLVRDEVKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           P+ L +  + +R+E      GL+R R F   DA+ F   ++  +E 
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEV 173


>gi|229117305|ref|ZP_04246683.1| Prolyl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|228666205|gb|EEL21669.1| Prolyl-tRNA synthetase [Bacillus cereus Rock1-3]
          Length = 566

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 79/166 (47%), Gaps = 10/166 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R ++ +    E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K      ++ R FAL   +      +    +KSY++L
Sbjct: 74  MQAAELWQESGRWYSYGSELMRMKD-----RNAREFALGATHEEVITDLVRDEVKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           P+ L +  + +R+E      GL+R R F   DA+ F   ++  +E 
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEV 173


>gi|299065636|emb|CBJ36808.1| Proline--tRNA ligase [Ralstonia solanacearum CMR15]
          Length = 574

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/162 (23%), Positives = 72/162 (44%), Gaps = 8/162 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           G+G+  +   G ++ + +   +R ++      E+  P V    LWQ++G WD     M  
Sbjct: 36  GAGLYTYMPVGLRVIRKVEQIVREEMNASGAVEVLMPVVQPAELWQETGRWDKMGDEMMR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           VK   +     R   ++P +      +    ++SY+++PV   +  + +R+E      G+
Sbjct: 96  VKDRHE-----RDLVIQPTSEEVVTDIARTEIRSYKQMPVNFYQIQTKFRDERRPRF-GI 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFE 421
           MR R FT  DA+ F    +       K++     I++ FG E
Sbjct: 150 MRGREFTMKDAYSFDRDAEGLKVSYEKMYGAYTRIFQRFGLE 191


>gi|237800208|ref|ZP_04588669.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331023065|gb|EGI03122.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 571

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 7/133 (5%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG+  W   G ++ + + + +R ++      EI  P +    LWQ+SG W+ Y   +  +
Sbjct: 37  SGLYTWLPMGLRVLRKVEAIVREEMDAAGALEILMPGIQPAELWQESGRWEQYGPEL--M 94

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           +  D   +  R F L P +      +  + L SY++LP+ + +  + +R+E      GLM
Sbjct: 95  RLVD---RHNREFCLGPTHEEVITDLARNELNSYKQLPINMYQIQTKFRDEIRPRF-GLM 150

Query: 382 RVRGFTQDDAHVF 394
           R R F   DA+ F
Sbjct: 151 RGREFVMKDAYSF 163


>gi|198275260|ref|ZP_03207791.1| hypothetical protein BACPLE_01419 [Bacteroides plebeius DSM 17135]
 gi|198271843|gb|EDY96113.1| hypothetical protein BACPLE_01419 [Bacteroides plebeius DSM 17135]
          Length = 153

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 61/126 (48%), Gaps = 13/126 (10%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDS 134
           H+C HI+   + +++   +     I       DF   Q  S D++A+IE  + E+IAR  
Sbjct: 19  HTCEHIINRTMVNLFGCGRAVSAHIERKKSKLDFALSQALSEDDIARIETTVNEVIARHL 78

Query: 135 PFLKQYLSHEKARELFESKKEAYKVEILESIP--AKENVTLYRQGEWFD-LCRGPHVRST 191
           P   ++++ E+A   F+ K+          +P  A E V +   G++ + LC G HV +T
Sbjct: 79  PVTTEFITQEEATGRFDMKR----------LPEGASETVRVVHVGDYDECLCIGQHVENT 128

Query: 192 GQVKKF 197
            ++  F
Sbjct: 129 SEIGTF 134


>gi|302187169|ref|ZP_07263842.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. syringae 642]
          Length = 571

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 11/135 (8%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG+  W   G ++ + + + +R ++      EI  P +    LWQ+SG W+ Y   +   
Sbjct: 37  SGLYTWLPMGLRVLRKVEAIVREEMDAAGALEILMPGIQPAELWQESGRWEQYGPELM-- 94

Query: 322 KCADDTIKDL--RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHG 379
                 + DL  R F L P +      +  + L SY++LP+ + +  + +R+E      G
Sbjct: 95  -----RLVDLHNREFCLGPTHEEVITDLARNELNSYKQLPINMYQIQTKFRDEIRPRF-G 148

Query: 380 LMRVRGFTQDDAHVF 394
           LMR R F   DA+ F
Sbjct: 149 LMRGREFVMKDAYSF 163


>gi|237713934|ref|ZP_04544415.1| uridine kinase [Bacteroides sp. D1]
 gi|262409158|ref|ZP_06085702.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|294806523|ref|ZP_06765363.1| phosphoribulokinase/uridine kinase family protein [Bacteroides
           xylanisolvens SD CC 1b]
 gi|298482250|ref|ZP_07000437.1| phosphoribulokinase family protein [Bacteroides sp. D22]
 gi|229446090|gb|EEO51881.1| uridine kinase [Bacteroides sp. D1]
 gi|262352905|gb|EEZ02001.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|294446281|gb|EFG14908.1| phosphoribulokinase/uridine kinase family protein [Bacteroides
           xylanisolvens SD CC 1b]
 gi|295085281|emb|CBK66804.1| Uridine kinase [Bacteroides xylanisolvens XB1A]
 gi|298271537|gb|EFI13111.1| phosphoribulokinase family protein [Bacteroides sp. D22]
          Length = 557

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/184 (20%), Positives = 84/184 (45%), Gaps = 2/184 (1%)

Query: 15  KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVI 73
           K FP+ ++  D+    + +   + V+  +N +   L+  V     +E +   D   +   
Sbjct: 16  KEFPIGSSLLDIYYGFNLNFPYQVVSAKVNNRSEGLNFRVYNNKDVEFLDVRDQSGMRTY 75

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
             S   ++ +AV  ++P+ ++ +   +  G++ +    +P   +++ +I+++MQEIIA +
Sbjct: 76  VRSLCFVLFKAVTELFPDGKLFVEHPVSKGYFCNLRIGRPIELEDVTRIKQRMQEIIAEN 135

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQ 193
             + +      +A  +F  +    KV +LE+         Y  G+  D   G  + STG 
Sbjct: 136 ISYHRIECHTAEAVRVFSERGMNDKVRLLET-SGSLYTYYYTLGDTIDYYYGNLLPSTGY 194

Query: 194 VKKF 197
           +K F
Sbjct: 195 LKLF 198


>gi|149202694|ref|ZP_01879666.1| alanyl-tRNA synthetase [Roseovarius sp. TM1035]
 gi|149143976|gb|EDM32010.1| alanyl-tRNA synthetase [Roseovarius sp. TM1035]
          Length = 893

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 67/143 (46%), Gaps = 6/143 (4%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPI-IEDGFYYDFDKEQPFSSDELAQIEKKM 126
           RS     HS  H++ EA++    E     G +  ED   +DF   +  S+ EL ++E+++
Sbjct: 558 RSAIRANHSATHLLHEALRGALGEHVAQRGSLNAEDRLRFDFSHAKALSAAELERVEREV 617

Query: 127 QEIIARDSPFLKQYLSHEKARELFESK--KEAYKVEI-LESIPAKENVTLYRQGEWF--D 181
            + I +++P   + ++ + AR L       E Y  E+ + S+   E       G  +  +
Sbjct: 618 NDYIRQNAPVETRIMAPDDARALGAQALFGEKYGDEVRVVSMGQAEGSGKGADGRTYSIE 677

Query: 182 LCRGPHVRSTGQVKKFFKLMKVA 204
           LC G HVR TG +  F  L + A
Sbjct: 678 LCGGTHVRRTGDIGVFVALAESA 700


>gi|289674658|ref|ZP_06495548.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. syringae FF5]
          Length = 172

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 66/138 (47%), Gaps = 7/138 (5%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  SG+  W   G ++ + + + +R ++      EI  P +    LWQ+SG W+ Y  
Sbjct: 32  IRKLASGLYTWLPMGLRVLRKVEAIVREEMDAAGALEILMPGIQPAELWQESGRWEQYGP 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            +  ++  D   +  R F L P +      +  + L SY++LP+ L +  + +R+E    
Sbjct: 92  EL--MRLVD---RHNREFCLGPTHEEVITDLARNELNSYKQLPINLYQIQTKFRDEIRPR 146

Query: 377 LHGLMRVRGFTQDDAHVF 394
             GLMR R F   DA+ F
Sbjct: 147 F-GLMRGREFVMKDAYSF 163


>gi|256827500|ref|YP_003151459.1| prolyl-tRNA synthetase, family II [Cryptobacterium curtum DSM
           15641]
 gi|256583643|gb|ACU94777.1| prolyl-tRNA synthetase, family II [Cryptobacterium curtum DSM
           15641]
          Length = 588

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 8/131 (6%)

Query: 272 GWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           GW++ + +   +R ++     +EI  P +    LW +SG W+ Y   +  +   DD  + 
Sbjct: 50  GWRVIRKIERIVREEMDAIGSQEIMMPVIQPAELWHESGRWNDYGPELMRM---DD--RH 104

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
                L P +     A+  + L+SY++LPV L +  S +R+E      GLMR R F   D
Sbjct: 105 GHGLCLGPTHEELITALVRNELRSYKQLPVILYQIQSKFRDEIRPRF-GLMRSREFIMKD 163

Query: 391 AHVF-CTKEQM 400
           A+ F  +KE +
Sbjct: 164 AYSFHASKESL 174


>gi|258405882|ref|YP_003198624.1| prolyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
 gi|257798109|gb|ACV69046.1| prolyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
          Length = 579

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 10/156 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+E   H+ L R   +  +    SG+  +   G +    +   +R ++ +   +EI  P 
Sbjct: 17  EAEVVSHKLLVRAGMIRKVT---SGIYTFLPLGLRALDKIAHVVREEMNRAGCQEIFMPM 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    LW+++G W+ Y   +  +K   D     R + L P +     ++    ++SYR+L
Sbjct: 74  VQPGDLWKETGRWEYYGKELLRLKDRHD-----RDYCLGPTHEEVVTSLVRGEVRSYRQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           P+ L +  + +R+E      GLMR R F   DA+ F
Sbjct: 129 PLNLYQIQTKFRDEIRPRF-GLMRCREFIMKDAYSF 163


>gi|317060327|ref|ZP_07924812.1| prolyl-tRNA synthetase [Fusobacterium sp. D12]
 gi|313686003|gb|EFS22838.1| prolyl-tRNA synthetase [Fusobacterium sp. D12]
          Length = 569

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 77/166 (46%), Gaps = 10/166 (6%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
           +E+E   H+ L R   +  +A   SG+  +   G++  + + + +R ++ +   +E+  P
Sbjct: 16  KEAEIISHQLLLRAGMIKKLA---SGLYTYLPLGFRTLKKVENIIREEMDRAGSQELLMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW++SG W+     M  +K      +  R F L P N      +  + + SY+ 
Sbjct: 73  VLQPAELWRESGRWNVMGEEMVRLKD-----RHQRDFVLGPTNEEVITDIVRNDISSYKS 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE 403
           LP+ L    +  R+E      GLMR R F   DA+ F T ++  +E
Sbjct: 128 LPINLYHIQTKVRDERRPRF-GLMRSREFIMKDAYSFHTSQESLDE 172



 Score = 44.3 bits (103), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 78/170 (45%), Gaps = 27/170 (15%)

Query: 488 GRDWQCGTIQVDFNLPSRFN----AFYVNSHSEK------CHPVMIHRAVFGSIERFIGI 537
            R  +CG I   F L  +++    A Y++   E       C+ + + R +  +IE     
Sbjct: 404 ARGIECGHI---FKLGDKYSKALGASYLDEKGESKIMLMGCYGIGVGRTMAAAIE----- 455

Query: 538 MIENFKGNLPLW---LSP--IQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETI 591
             +N+  N  +W   L+P  +  I   I ++  ++ A+EI   L   HL    D R+E  
Sbjct: 456 --QNYDENGIIWPTALAPYLVDVIPANIKNTEQMKLAEEIYENLNKEHLDAMIDDRDERP 513

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            +K ++  +   P  IICG K+A+E  + ++   +  T +VS  + IP +
Sbjct: 514 GFKFKDADLIGFPFKIICG-KKAAENIVELKIRKTGETLEVSADEVIPTI 562


>gi|294647483|ref|ZP_06725066.1| phosphoribulokinase/uridine kinase family protein [Bacteroides
           ovatus SD CC 2a]
 gi|292637193|gb|EFF55628.1| phosphoribulokinase/uridine kinase family protein [Bacteroides
           ovatus SD CC 2a]
          Length = 554

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/184 (20%), Positives = 84/184 (45%), Gaps = 2/184 (1%)

Query: 15  KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVI 73
           K FP+ ++  D+    + +   + V+  +N +   L+  V     +E +   D   +   
Sbjct: 13  KEFPIGSSLLDIYYGFNLNFPYQVVSAKVNNRSEGLNFRVYNNKDVEFLDVRDQSGMRTY 72

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
             S   ++ +AV  ++P+ ++ +   +  G++ +    +P   +++ +I+++MQEIIA +
Sbjct: 73  VRSLCFVLFKAVTELFPDGKLFVEHPVSKGYFCNLRIGRPIELEDVTRIKQRMQEIIAEN 132

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQ 193
             + +      +A  +F  +    KV +LE+         Y  G+  D   G  + STG 
Sbjct: 133 ISYHRIECHTAEAVRVFSERGMNDKVRLLET-SGSLYTYYYTLGDTIDYYYGNLLPSTGY 191

Query: 194 VKKF 197
           +K F
Sbjct: 192 LKLF 195


>gi|78357249|ref|YP_388698.1| prolyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|114152190|sp|Q30Z93|SYP_DESDG RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|78219654|gb|ABB39003.1| prolyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 574

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 7/133 (5%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG+  +   G +  +   S +R+++     +E+  P V    LWQ+SG WD Y   +  +
Sbjct: 37  SGIYIYLPLGLRSIEKAASIVRQEMNSAGAQELLMPMVQPADLWQESGRWDFYGKELLRI 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
                + +  R + L P +      +    ++SYR+LP+ L +  + +R+E      GLM
Sbjct: 97  -----SDRHGRDYCLGPTHEEVITDLVRGEVRSYRQLPLNLYQIQTKFRDEIRPRF-GLM 150

Query: 382 RVRGFTQDDAHVF 394
           R R F   DA+ F
Sbjct: 151 RGREFMMKDAYSF 163


>gi|229098288|ref|ZP_04229235.1| Prolyl-tRNA synthetase [Bacillus cereus Rock3-29]
 gi|228685186|gb|EEL39117.1| Prolyl-tRNA synthetase [Bacillus cereus Rock3-29]
          Length = 566

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 79/166 (47%), Gaps = 10/166 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R ++ +    E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K      ++ R FAL   +      +    +KSY++L
Sbjct: 74  MQAAELWQESGRWYSYGSELMRMKD-----RNAREFALGATHEEVITDLVRDEVKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           P+ L +  + +R+E      GL+R R F   DA+ F   ++  +E 
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEV 173


>gi|124027657|ref|YP_001012977.1| bifunctional aminoacyl-tRNA synthetase [Hyperthermus butylicus DSM
           5456]
 gi|123978351|gb|ABM80632.1| Bifunctional aminoacyl-tRNA synthetase [Hyperthermus butylicus DSM
           5456]
          Length = 380

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 82/394 (20%), Positives = 158/394 (40%), Gaps = 72/394 (18%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHLW-QQSGHWDSYRANMFAV 321
           G+  W   G+++ + +I  +R  +    +EEI  P ++ +HL  ++S H   +   ++ V
Sbjct: 36  GMGIWLPYGFQLRRRIIELVREVLDSTGHEEILMPLLIPEHLLRKESEHIRGFEGEVYWV 95

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
                   D++  AL+P +      + +  +KSYR+LP +  +  S++R E + +   ++
Sbjct: 96  THGGHEPLDVK-LALRPTSETSITYMESFWIKSYRQLPKKYYQIVSIFRYE-TKATRPMI 153

Query: 382 RVRGFTQ-DDAHV----FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
           R+R  T   +AH     F   ++   E ++++     I+ + G   +   +S RPE    
Sbjct: 154 RLREVTTFKEAHTVHDSFADADRQVAEAIELYK---KIFDELGIPYV---ISRRPE---- 203

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
               WD                             GA Y   F+ I+ D  G+  Q GT+
Sbjct: 204 ----WDKF--------------------------AGAVYTVAFDTIMPD--GKTLQIGTV 231

Query: 497 Q---VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLW 549
                +F +P     F V             +  +G  +R +  +I    ++    LP  
Sbjct: 232 HHLGQNFTVP-----FDVKIQLRDESIDYAWQTSYGISDRIVATVIAIHGDDRGAVLPPN 286

Query: 550 LSPIQAIVTTITSS--------AVEYAQEIANLLKSHHLSIETDFRNET-INYKIREHSI 600
           ++PIQ +V  I +           E+ +++  +LK   +    D R +     K  E   
Sbjct: 287 VAPIQVVVIPIPAGDDEEKKRLVAEHLEKVKEVLKKAGIRFRVDDREDVRPGRKFYEWEA 346

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           K +P+ I  G +EA   ++ + R  +     V L
Sbjct: 347 KGVPVRIEVGLREAETGTVLVARRDTLEKTVVKL 380


>gi|196008377|ref|XP_002114054.1| hypothetical protein TRIADDRAFT_58133 [Trichoplax adhaerens]
 gi|190583073|gb|EDV23144.1| hypothetical protein TRIADDRAFT_58133 [Trichoplax adhaerens]
          Length = 473

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/223 (25%), Positives = 93/223 (41%), Gaps = 25/223 (11%)

Query: 213 NRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKG 272
           ++P+L R YG     Q   + ++  +  S++     ++R+  L     + +G++   R G
Sbjct: 19  DKPLLYRYYGR----QTVSSLFIPMMRTSDQSASASVSRKTIL-----ENAGLLKQSRPG 69

Query: 273 -WKIFQTLISYMRRKIKDDYEE--------INTPQVLDQHLWQQSGHWDSYRANMFAVKC 323
            + I    +  M + IK   EE        + TP ++   LWQ SG WD+  A MF +K 
Sbjct: 70  LYYILPVALRAMYKLIKVVDEEMTRIGGSKLGTPCLIPADLWQSSGRWDTLGAEMFKLKD 129

Query: 324 ADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRV 383
             +     R + L P +      +    L S   +P+RL +    +R+E    L GL R 
Sbjct: 130 RHN-----RHYCLGPTHEESISELVGTYLNSKNMMPLRLYQIDRKFRDEIRPRL-GLRRA 183

Query: 384 RGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
           R F   D + F   KE   N    I    + I+   G   + V
Sbjct: 184 REFWMKDMYSFDIDKEASLNSYEIICEAYVRIFNRLGLNVVKV 226


>gi|85703236|ref|ZP_01034340.1| alanyl-tRNA synthetase [Roseovarius sp. 217]
 gi|85672164|gb|EAQ27021.1| alanyl-tRNA synthetase [Roseovarius sp. 217]
          Length = 892

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/153 (26%), Positives = 70/153 (45%), Gaps = 6/153 (3%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPI-IEDGFYYDFDKEQPFSS 116
           S+++      R+     HS  H++ EA++    E     G +  ED   +DF   +  S+
Sbjct: 547 SVKLEVDHSRRNAIRANHSATHLLHEALRKALGEHVAQRGSLNAEDRLRFDFSHAKALST 606

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESK--KEAYKVEI-LESIPAKENVTL 173
            EL ++E ++ E I +++P   + ++ + AR L       E Y  E+ + S+ A+     
Sbjct: 607 AELERVESEVNEFIRQNAPVETRIMTPDDARALGAQALFGEKYGDEVRVVSMGAEAGSGK 666

Query: 174 YRQGEWF--DLCRGPHVRSTGQVKKFFKLMKVA 204
              G  +  +LC G HVR TG +  F  L   A
Sbjct: 667 GADGRTYSIELCGGTHVRRTGDIGVFVALGDAA 699


>gi|50751644|ref|XP_422493.1| PREDICTED: similar to Prolyl-tRNA synthetase
           (mitochondrial)(putative) [Gallus gallus]
          Length = 470

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 64/140 (45%), Gaps = 8/140 (5%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA-VFNH 350
           +++N P +    LW+ SG W+     +F  + AD   K+   + L P +       V  H
Sbjct: 110 QKVNMPSLSSAELWRTSGRWEQMGPELF--RLADRHGKE---YCLGPTHEEAVTELVAAH 164

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHN 409
              SYR+LP+RL +    +R+EP     GL+R R F   D + F   E+      + +  
Sbjct: 165 SNLSYRQLPLRLYQVTRKFRDEPKPRF-GLLRSREFYMKDMYTFDASEEAARHTYELVCT 223

Query: 410 LIISIYKDFGFEKIMVKLST 429
              S++K  G   + V+ +T
Sbjct: 224 AYRSLFKRLGLRCVQVRAAT 243


>gi|157376262|ref|YP_001474862.1| prolyl-tRNA synthetase [Shewanella sediminis HAW-EB3]
 gi|157318636|gb|ABV37734.1| prolyl-tRNA synthetase [Shewanella sediminis HAW-EB3]
          Length = 584

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/188 (21%), Positives = 84/188 (44%), Gaps = 9/188 (4%)

Query: 220 IYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQ 277
           IY   W +   +++YL   ++    D   ++ ++ L    I  + SG+  W   G ++ +
Sbjct: 7   IYFNNWISVMRVSKYLLSTQKETPADAEVISHQLMLRAGMIRRNASGLYSWLPTGLRVLR 66

Query: 278 TLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFAL 336
            + + +R ++ K    EI  P V    LW ++G ++ +   +   +   +     R F L
Sbjct: 67  KVEAIVREEMNKAGSVEILMPMVQPADLWVETGRFEKFGPELLRFQDRHN-----RDFVL 121

Query: 337 KPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT 396
            P +      +    + SY++LP+ L +  + +R+E      G+MR R F   DA+ F  
Sbjct: 122 GPTHEEVITDIVRKEVNSYKQLPLNLFQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHL 180

Query: 397 KEQMFNEC 404
            ++  +E 
Sbjct: 181 DQETMDET 188


>gi|146341083|ref|YP_001206131.1| prolyl-tRNA synthetase [Bradyrhizobium sp. ORS278]
 gi|166980103|sp|A4YVI0|SYP_BRASO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|146193889|emb|CAL77906.1| Prolyl-tRNA synthetase (Proline--tRNA ligase) (ProRS)
           [Bradyrhizobium sp. ORS278]
          Length = 444

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 86/202 (42%), Gaps = 14/202 (6%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTP 297
           +E+E   HR + R   L    ++ +G+  W   G+K+ + +   +R  + +    E+  P
Sbjct: 16  KEAEIVSHRLMLRAGML---RQEAAGIYAWLPLGFKVLKKIEQIVREEQNRAGALELLMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW++SG +D+Y   M  +     + +  R     P N      +F   +KSYR 
Sbjct: 73  TLQLADLWRESGRYDAYGPEMLRI-----SDRHKRELLYGPTNEEMITEIFRAYVKSYRN 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYK 416
           LP+ L      +R+E      G+MR R F   DA+ F   E        K+    +  + 
Sbjct: 128 LPLNLYHIQWKFRDEQRPRF-GVMRGREFLMKDAYSFDLDEAGARRAYNKMFVAYLRTFA 186

Query: 417 DFGFEKIMVKLSTRPEKRVGSD 438
             G + I ++  T P   +G D
Sbjct: 187 RMGLKGIPMRAETGP---IGGD 205


>gi|62184882|ref|YP_219667.1| prolyl-tRNA synthetase [Chlamydophila abortus S26/3]
 gi|81312944|sp|Q5L6M5|SYP_CHLAB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|62147949|emb|CAH63696.1| prolyl-tRNA synthetase [Chlamydophila abortus S26/3]
          Length = 577

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/176 (22%), Positives = 83/176 (47%), Gaps = 18/176 (10%)

Query: 263 SGVIFWHRKG--------WKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDS 313
           +G IF   KG        W++   ++  +R ++     +E+  P +    LWQ++G W++
Sbjct: 29  AGYIFKTAKGIYTYTPLFWRVALKMMDIIREELNAIGGQELVLPILHPAELWQKTGRWEA 88

Query: 314 YRAN--MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRN 371
           +R+   ++ VK  +D     + F L P +        +  L   ++LP+ L +  + +R+
Sbjct: 89  FRSEGLLYTVKDRED-----KEFCLAPTHEEIVSMFVSQWLSGRKQLPIHLYQIATKFRD 143

Query: 372 EPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKDFGFEKIMVK 426
           E      GLMR + F  +D++ F  + EQM  +  K+     +I+     + ++V+
Sbjct: 144 EIRPRF-GLMRAKEFLMEDSYTFSDSPEQMNEQYAKLRQAYQNIFDRLEIQYVIVE 198


>gi|326474290|gb|EGD98299.1| prolyl-tRNA synthetase [Trichophyton tonsurans CBS 112818]
          Length = 631

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 63/132 (47%), Gaps = 13/132 (9%)

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           Q LW++SG      + +F       T      F L P +     +V +  +KSYR+LP+R
Sbjct: 116 QALWKKSGRLHDDDSEVFRFVDRKKT-----PFLLAPTHEEEITSVVSGLIKSYRDLPLR 170

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI----ISIYKD 417
           + +    YR+EP    HGL+R R F   D + F + E    E +K +N +    IS++K+
Sbjct: 171 VYQISRKYRDEPR-PRHGLLRGREFVMKDLYTFDSTEA---EAIKTYNTVKEAYISLFKE 226

Query: 418 FGFEKIMVKLST 429
                ++   S+
Sbjct: 227 LKLPYVVASASS 238


>gi|134102383|ref|YP_001108044.1| prolyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
 gi|133915006|emb|CAM05119.1| prolyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
          Length = 574

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/196 (22%), Positives = 88/196 (44%), Gaps = 19/196 (9%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   HR L R   +  I   G G+  W   G ++ + +   +R+++     +EI+ P 
Sbjct: 12  DAEVPSHRLLVRAGYVRRI---GPGIYSWLPLGLRVLRNIEEIVRQEMDAIGAQEIHFPA 68

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L +  ++ +  W  Y  N+F +K  D    D        +  P H  +F   +K    S
Sbjct: 69  LLPKEPYEATNRWTEYGPNLFRLK--DRKGGDY-------LLGPTHEELFTLTVKGEYSS 119

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH-NLIIS 413
           Y++ PV L +  + YR+E      G++R R F   D++ F   ++      ++H +  I 
Sbjct: 120 YKDYPVILYQIQTKYRDEER-PRAGILRGREFVMKDSYSFDLDDEGLTNSYRLHRDAYIR 178

Query: 414 IYKDFGFEKIMVKLST 429
           I+   G   ++V  ++
Sbjct: 179 IFDRVGLRYVIVAATS 194


>gi|51978320|gb|AAU19870.1| proline--tRNA ligase (prolyl-tRNA synthetase) [Bacillus cereus
           E33L]
          Length = 502

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 91/452 (20%), Positives = 173/452 (38%), Gaps = 70/452 (15%)

Query: 212 SNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRK 271
             R  L  + G      +E  Q +  +EE   + +  + ++ +L   +    G +     
Sbjct: 12  GTRAFLYFLEGGRLTMAKEQVQAITKMEEDFAQWYTDIVKKAELVDYS-SVKGCMILRPY 70

Query: 272 GWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIK 329
           G+ +++ +   M  K+K   +E +  P  + + L Q +  H + +   +  V    D  K
Sbjct: 71  GYALWENMQKVMDEKLKATGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGDE-K 129

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
                 ++P +       F+  ++SY +LP    ++ SV R E +      +R   F   
Sbjct: 130 LAERLCIRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKT--TRPFLRTTEFLWQ 187

Query: 390 DAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIM 448
           + H +  T E+   E L I NL  S  +D+    ++    T  EK  G+ A +       
Sbjct: 188 EGHTIHETAEESQAETLNILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKATY------- 240

Query: 449 KGVLDTIKNSSQD--RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF 506
                TI++   D   + TG     G  +   F+    D  G+ WQ              
Sbjct: 241 -----TIESLMHDGKALQTGTSHNFGTNFSEAFDIKFLDRTGK-WQ-------------- 280

Query: 507 NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTIT- 561
                           +H+  +G   R IG +I     N    +P  ++P+Q ++  I  
Sbjct: 281 ---------------YVHQTSWGVSTRMIGGLIMVHGDNNGLVMPPKVAPVQVVIVPIAQ 325

Query: 562 ------SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEAS 615
                 + A+E    I  + +     ++ D  N+T  +K  E+ +K IPI +  G K+  
Sbjct: 326 HKEGVLAKAIELQGHIQKVAR-----VKIDASNKTPGWKFNEYEMKGIPIRLEVGPKDIE 380

Query: 616 ERSIGIRRFGSTTTQKVS---LLDAIPILTKE 644
           +  + + R  +   + +S   L + IP L +E
Sbjct: 381 KNQVVLVRRDTKEKEFISMDQLEERIPALLEE 412


>gi|257462679|ref|ZP_05627088.1| prolyl-tRNA synthetase [Fusobacterium sp. D12]
          Length = 593

 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 77/166 (46%), Gaps = 10/166 (6%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
           +E+E   H+ L R   +  +A   SG+  +   G++  + + + +R ++ +   +E+  P
Sbjct: 40  KEAEIISHQLLLRAGMIKKLA---SGLYTYLPLGFRTLKKVENIIREEMDRAGSQELLMP 96

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW++SG W+     M  +K      +  R F L P N      +  + + SY+ 
Sbjct: 97  VLQPAELWRESGRWNVMGEEMVRLKD-----RHQRDFVLGPTNEEVITDIVRNDISSYKS 151

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE 403
           LP+ L    +  R+E      GLMR R F   DA+ F T ++  +E
Sbjct: 152 LPINLYHIQTKVRDERRPRF-GLMRSREFIMKDAYSFHTSQESLDE 196



 Score = 44.7 bits (104), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 78/170 (45%), Gaps = 27/170 (15%)

Query: 488 GRDWQCGTIQVDFNLPSRFN----AFYVNSHSEK------CHPVMIHRAVFGSIERFIGI 537
            R  +CG I   F L  +++    A Y++   E       C+ + + R +  +IE     
Sbjct: 428 ARGIECGHI---FKLGDKYSKALGASYLDEKGESKIMLMGCYGIGVGRTMAAAIE----- 479

Query: 538 MIENFKGNLPLW---LSP--IQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETI 591
             +N+  N  +W   L+P  +  I   I ++  ++ A+EI   L   HL    D R+E  
Sbjct: 480 --QNYDENGIIWPTALAPYLVDVIPANIKNTEQMKLAEEIYENLNKEHLDAMIDDRDERP 537

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            +K ++  +   P  IICG K+A+E  + ++   +  T +VS  + IP +
Sbjct: 538 GFKFKDADLIGFPFKIICG-KKAAENIVELKIRKTGETLEVSADEVIPTI 586


>gi|313623934|gb|EFR94040.1| prolyl-tRNA synthetase [Listeria innocua FSL J1-023]
          Length = 568

 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 58/130 (44%), Gaps = 7/130 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +    LW +SG W  Y   +  +K      +  R F L P +     ++    +
Sbjct: 68  EMLMPALQPAELWHESGRWADYGPELMRLKD-----RAARDFVLGPTHEELITSLLRDEI 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI-HNLI 411
           KSY+ LP+ L +  + +R+E      GL+R R F   DA+ F    +  +E  ++ H   
Sbjct: 123 KSYKRLPITLYQIQTKFRDEKRPRF-GLLRGREFIMKDAYSFHATSESLDETFELMHQAY 181

Query: 412 ISIYKDFGFE 421
            +I+   G E
Sbjct: 182 SNIFSRCGLE 191


>gi|254578182|ref|XP_002495077.1| ZYRO0B02794p [Zygosaccharomyces rouxii]
 gi|238937967|emb|CAR26144.1| ZYRO0B02794p [Zygosaccharomyces rouxii]
          Length = 564

 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 75/170 (44%), Gaps = 18/170 (10%)

Query: 255 LFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYE--EINTPQVLDQHLWQQSGHWD 312
           L  I +  SG++ W   G +    + S +R ++  D +  E++   +  + LW+++  W 
Sbjct: 37  LGFIRQSQSGLVHWLPMGLRTLNKVESIVRHRMNQDGDALEVSLSALSPRSLWEKTNRWS 96

Query: 313 SYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE 372
                +F +K A        ++ L P        + N  + SYR++P  + +    YR+E
Sbjct: 97  G--TELFKLKDAKKA-----SYCLTPTCEEDITNLMNEYITSYRDMPTTVYQITRKYRDE 149

Query: 373 --PSGSLHGLMRVRGFTQDDAHVFCTKE----QMFNECLKIHNLIISIYK 416
             P G   GL+R R F   DA+ F + E    Q F +   ++N I    K
Sbjct: 150 LRPRG---GLLRGREFLMKDAYSFASNEEEALQTFQKMNAVYNKIFQDLK 196


>gi|227892604|ref|ZP_04010409.1| prolyl-tRNA synthetase [Lactobacillus ultunensis DSM 16047]
 gi|227865589|gb|EEJ73010.1| prolyl-tRNA synthetase [Lactobacillus ultunensis DSM 16047]
          Length = 565

 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/169 (24%), Positives = 78/169 (46%), Gaps = 16/169 (9%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHL-----WQQSGHW 311
           +I +  +GV  +   G+++ +   +     I+ + + IN P+++  HL     WQ+SG +
Sbjct: 31  YIRQVTAGVYAYLPLGYRVLRKAEAI----IEQEMDRINVPEMIMPHLLPATLWQESGRY 86

Query: 312 DSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRN 371
             Y   MF +K      +  R   L P +      +    LKSY+++P+ L +  + +R+
Sbjct: 87  KKYGPEMFKLKD-----RHGRESLLGPTHEETFTEIIAKNLKSYKQMPLALYQIQTKFRD 141

Query: 372 EPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFG 419
           E      GL+R R F   D + F  T++Q+  +     N    I+K  G
Sbjct: 142 ENRPRF-GLLRGREFVMLDGYSFAATRDQLDEQFDDQKNAYKRIFKRAG 189


>gi|326479249|gb|EGE03259.1| prolyl-tRNA synthetase [Trichophyton equinum CBS 127.97]
          Length = 631

 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 63/132 (47%), Gaps = 13/132 (9%)

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           Q LW++SG      + +F       T      F L P +     +V +  +KSYR+LP+R
Sbjct: 116 QALWKKSGRLHDDDSEVFRFVDRKKT-----PFLLAPTHEEEITSVVSGLIKSYRDLPLR 170

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI----ISIYKD 417
           + +    YR+EP    HGL+R R F   D + F + E    E +K +N +    IS++K+
Sbjct: 171 VYQISRKYRDEPR-PRHGLLRGREFVMKDLYTFDSTEA---EAIKTYNTVKEAYISLFKE 226

Query: 418 FGFEKIMVKLST 429
                ++   S+
Sbjct: 227 LKLPYVVASASS 238


>gi|302339646|ref|YP_003804852.1| ATPase AAA [Spirochaeta smaragdinae DSM 11293]
 gi|301636831|gb|ADK82258.1| AAA ATPase [Spirochaeta smaragdinae DSM 11293]
          Length = 553

 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/200 (24%), Positives = 93/200 (46%), Gaps = 9/200 (4%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRS----LAKKAVAVAINGKVCDLSDPVR-EG 57
           + + +T PDGS K     A G+ V+E +  S    L    VA  +N  +   S  +  + 
Sbjct: 2   NQVTVTLPDGSKKTV---AYGTRVSEFLPPSEADDLQGPVVAALVNNDLVTPSFKIEIDA 58

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSD 117
           ++E +T        + R S + ++  A + ++P+  + IG  + DG+YY ++        
Sbjct: 59  TVEPVTLYSRYGNRIYRRSLSFLLGLASKKVFPDRHLVIGHSLGDGYYYYYNGMAGVGEG 118

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           E+A++E++M  I+    P  +  +S+E+A E    K+     E+L        + LY   
Sbjct: 119 EIARLEEEMHAIVKAALPIKRSVISYEQALERVR-KENLPATELLLRYRNDPKIPLYMCD 177

Query: 178 EWFDLCRGPHVRSTGQVKKF 197
           ++FD+   P + +T  +  F
Sbjct: 178 QFFDISYEPLLDNTSLLSLF 197


>gi|121602198|ref|YP_989086.1| prolyl-tRNA synthetase [Bartonella bacilliformis KC583]
 gi|152112216|sp|A1USY3|SYP_BARBK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|120614375|gb|ABM44976.1| prolyl-tRNA synthetase [Bartonella bacilliformis KC583]
          Length = 441

 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 62/138 (44%), Gaps = 7/138 (5%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  SG+  W   G K+   + + +R  + +    EI+ P +    LW++SG +D Y  
Sbjct: 32  IRQQTSGIYSWLPLGKKVLDKVCTIIREEQERAGALEISMPTIQSADLWRESGRYDDYGL 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  +K   +     R     P N      +F   ++SY++LP+ L +    +R+E    
Sbjct: 92  EMLRIKDRQE-----RDLLYGPTNEEMVTDIFRSYVRSYKDLPLNLYQIQWKFRDEIRPR 146

Query: 377 LHGLMRVRGFTQDDAHVF 394
             G+MR R F   D + F
Sbjct: 147 F-GVMRSREFLMKDGYSF 163


>gi|83720100|ref|YP_441693.1| prolyl-tRNA synthetase [Burkholderia thailandensis E264]
 gi|167618612|ref|ZP_02387243.1| prolyl-tRNA synthetase [Burkholderia thailandensis Bt4]
 gi|257137862|ref|ZP_05586124.1| prolyl-tRNA synthetase [Burkholderia thailandensis E264]
 gi|114152178|sp|Q2SZF6|SYP_BURTA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|83653925|gb|ABC37988.1| prolyl-tRNA synthetase [Burkholderia thailandensis E264]
          Length = 578

 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 58/130 (44%), Gaps = 7/130 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P V    LWQ+SG W+ Y   +   K      +    F + P +      +  + +
Sbjct: 68  ELLMPAVQPAELWQESGRWEQYGPELLRFKD-----RKQNEFVIGPTHEEVVTDIARNQI 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLI 411
           KSYR++PV   +  + +R+E      G+MR R F   DA+ F    +   E   K+++  
Sbjct: 123 KSYRQMPVNFYQIQTKFRDEIRPRF-GVMRGREFIMKDAYSFDKDHESLKESYKKMYDAY 181

Query: 412 ISIYKDFGFE 421
           + I+   G E
Sbjct: 182 VRIFTRIGLE 191


>gi|189465317|ref|ZP_03014102.1| hypothetical protein BACINT_01665 [Bacteroides intestinalis DSM
           17393]
 gi|189437591|gb|EDV06576.1| hypothetical protein BACINT_01665 [Bacteroides intestinalis DSM
           17393]
          Length = 557

 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/184 (20%), Positives = 84/184 (45%), Gaps = 2/184 (1%)

Query: 15  KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVI 73
           K FP+ ++  D+    + +   + V+  +N +   L+  V     +E +   D   L   
Sbjct: 16  KEFPIGSSLLDIYYGFNLNFPYQVVSAKVNNRSEGLNFRVYNNKDVEFLDIRDSSGLRTY 75

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
             S   ++ +AV  ++P+ ++ +   +  G++ +    +P + ++++ I+K+MQEII  +
Sbjct: 76  VRSLCFVLYKAVSELFPDGKLFVEHPVSKGYFCNLRIGRPITLEDVSAIKKRMQEIIDEN 135

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQ 193
             + +      +A  +F  +    KV++LE+         Y  G+  D   G  + STG 
Sbjct: 136 ITYRRTECHTTEAVRIFNERGMTDKVKLLET-SGSIYTYYYSLGDTIDYYYGNLLPSTGF 194

Query: 194 VKKF 197
           +  F
Sbjct: 195 IWLF 198


>gi|313619139|gb|EFR90927.1| prolyl-tRNA synthetase [Listeria innocua FSL S4-378]
          Length = 409

 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 58/130 (44%), Gaps = 7/130 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +    LW +SG W  Y   +  +K      +  R F L P +     ++    +
Sbjct: 68  EMLMPALQPAELWHESGRWADYGPELMRLKD-----RAARDFVLGPTHEELITSLLRDEI 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI-HNLI 411
           KSY+ LP+ L +  + +R+E      GL+R R F   DA+ F    +  +E  ++ H   
Sbjct: 123 KSYKRLPITLYQIQTKFRDEKRPRF-GLLRGREFIMKDAYSFHATSESLDETFELMHQAY 181

Query: 412 ISIYKDFGFE 421
            +I+   G E
Sbjct: 182 SNIFSRCGLE 191


>gi|167842004|ref|ZP_02468688.1| prolyl-tRNA synthetase [Burkholderia thailandensis MSMB43]
          Length = 578

 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 58/130 (44%), Gaps = 7/130 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P V    LWQ+SG W+ Y   +   K      +    F + P +      +  + +
Sbjct: 68  ELLMPAVQPAELWQESGRWEQYGPELLRFKD-----RKQNEFVIGPTHEEVVTDIARNQI 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLI 411
           KSYR++PV   +  + +R+E      G+MR R F   DA+ F    +   E   K+++  
Sbjct: 123 KSYRQMPVNFYQIQTKFRDEIRPRF-GVMRGREFIMKDAYSFDKDHESLKESYKKMYDAY 181

Query: 412 ISIYKDFGFE 421
           + I+   G E
Sbjct: 182 VRIFSRIGLE 191


>gi|262372182|ref|ZP_06065461.1| alanyl-tRNA synthetase [Acinetobacter junii SH205]
 gi|262312207|gb|EEY93292.1| alanyl-tRNA synthetase [Acinetobacter junii SH205]
          Length = 884

 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 72/155 (46%), Gaps = 15/155 (9%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSS 116
           ++E     D R+     HS  H++  A++ I  + VQ     +  D   +DF  +QP + 
Sbjct: 552 NVEATVKADIRAATARNHSATHLLHAALRQILGDHVQQKGSLVASDILRFDFANDQPVTF 611

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESK-KEAYKVEILESIPAKEN 170
           ++L QIE+ +   +  ++P   + L  E A+      LF  K  E  +V  + SI  ++N
Sbjct: 612 EQLQQIERLVNAEVIANTPVTTELLDIESAKAKGAMMLFGEKYGEEVRVLSMGSIIEEKN 671

Query: 171 VTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAG 205
            ++       +LC G HV+ TG +   FK+    G
Sbjct: 672 FSI-------ELCGGIHVKRTGDI-GLFKITSEGG 698


>gi|167580503|ref|ZP_02373377.1| prolyl-tRNA synthetase [Burkholderia thailandensis TXDOH]
          Length = 578

 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 58/130 (44%), Gaps = 7/130 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P V    LWQ+SG W+ Y   +   K      +    F + P +      +  + +
Sbjct: 68  ELLMPAVQPAELWQESGRWEQYGPELLRFKD-----RKQNEFVIGPTHEEVVTDIARNQI 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLI 411
           KSYR++PV   +  + +R+E      G+MR R F   DA+ F    +   E   K+++  
Sbjct: 123 KSYRQMPVNFYQIQTKFRDEIRPRF-GVMRGREFIMKDAYSFDKDHESLKESYKKMYDAY 181

Query: 412 ISIYKDFGFE 421
           + I+   G E
Sbjct: 182 VRIFTRIGLE 191


>gi|126440120|ref|YP_001060493.1| prolyl-tRNA synthetase [Burkholderia pseudomallei 668]
 gi|166980109|sp|A3NDS2|SYP_BURP6 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|126219613|gb|ABN83119.1| proline--tRNA ligase [Burkholderia pseudomallei 668]
          Length = 578

 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 58/130 (44%), Gaps = 7/130 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P V    LWQ+SG W+ Y   +   K      +    F + P +      +  + +
Sbjct: 68  ELLMPAVQPAELWQESGRWEQYGPELLRFKD-----RKQNEFVIGPTHEEVVTDIARNQI 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLI 411
           KSYR++PV   +  + +R+E      G+MR R F   DA+ F    +   E   K+++  
Sbjct: 123 KSYRQMPVNFYQIQTKFRDEIRPRF-GVMRGREFIMKDAYSFDKDHESLKESYKKMYDAY 181

Query: 412 ISIYKDFGFE 421
           + I+   G E
Sbjct: 182 VRIFTRIGLE 191


>gi|23501709|ref|NP_697836.1| prolyl-tRNA synthetase [Brucella suis 1330]
 gi|81847158|sp|Q8G197|SYP_BRUSU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|23347633|gb|AAN29751.1| prolyl-tRNA synthetase [Brucella suis 1330]
          Length = 442

 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/214 (23%), Positives = 90/214 (42%), Gaps = 25/214 (11%)

Query: 236 YFL-------EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KI 287
           YFL       +E+E   HR + R      I +  +G+  W   G K+   + + +R  + 
Sbjct: 6   YFLPILKENPKEAEIVSHRLMLRS---GMIRQQSAGIYSWLPIGLKVLNKVCTIIREEQN 62

Query: 288 KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
           +    EI  P +    LW++SG + +Y   M  ++   +     R     P N      +
Sbjct: 63  RAGANEILMPTIQSADLWRESGRYGAYGKEMLRIQDRQE-----REMLFGPTNEEMVTDI 117

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
           F   ++SY++LP+ L      +R+E      G+MR R F   DA+ F    +     +  
Sbjct: 118 FRSYVRSYKDLPLNLYHIQWKFRDEVRPRF-GVMRSREFLMKDAYSFDLDYE--GAKMAY 174

Query: 408 HNLIISIYKDF---GFEKIMVKLSTRPEKRVGSD 438
           + + +S  + F   G + I ++  T P   +G D
Sbjct: 175 YRMFVSYLRTFARVGLQAIPMRADTGP---IGGD 205


>gi|239982632|ref|ZP_04705156.1| prolyl-tRNA synthetase [Streptomyces albus J1074]
 gi|291454473|ref|ZP_06593863.1| prolyl-tRNA synthetase 1 [Streptomyces albus J1074]
 gi|291357422|gb|EFE84324.1| prolyl-tRNA synthetase 1 [Streptomyces albus J1074]
          Length = 564

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 88/195 (45%), Gaps = 28/195 (14%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEINTP 297
           ++E   H+ L R     ++    +G+  W   G K+    IS++ R+  D    +E+  P
Sbjct: 21  DAETISHKLLVRA---GYVRRTAAGIWSWLPLGKKVLDN-ISHIVREEMDAIGAQEVLLP 76

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK---- 353
            +L +  ++ SG W+ Y   +F +K  D    D        +  P H  +F   +K    
Sbjct: 77  ALLPKEPYEASGRWEEYGDLLFRLK--DRKGADY-------LLGPTHEEIFTQVVKDQCT 127

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SY++LPV L +  + YR+E +    G++R R F   D++ F T ++   E  ++H     
Sbjct: 128 SYKDLPVMLYQIQTKYRDE-ARPRSGVLRGREFQMKDSYSFDTTDEGLEESYQLHRA--- 183

Query: 414 IYKDFGFEKIMVKLS 428
                 ++KI  +L 
Sbjct: 184 -----AYQKIFARLG 193


>gi|118595268|ref|ZP_01552615.1| prolyl-tRNA synthetase [Methylophilales bacterium HTCC2181]
 gi|118441046|gb|EAV47673.1| prolyl-tRNA synthetase [Methylophilales bacterium HTCC2181]
          Length = 411

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 79/398 (19%), Positives = 155/398 (38%), Gaps = 49/398 (12%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           GSG+  W   G ++ + + + +R +++     E+  P +    LW+++G W+ +   M  
Sbjct: 36  GSGLYTWMPMGLRVLKKIENTIREEMQQAGAVELLMPAIQPAELWEETGRWELFGPQMLK 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +    D     R F   P +      +  + L SY++LP+   +    +R+E      G+
Sbjct: 96  ISDRHD-----RPFCFGPTHEEVITDLVRNELNSYKQLPMNFYQIQMKFRDEIRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTK----EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
           MR R F   DA+ F       +  ++   K +N   +I+   G   ++ +        +G
Sbjct: 150 MRAREFLMKDAYSFHADIESLKHTYDLMFKAYN---AIFTKLG---LIFRAVQADNGAIG 203

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ-CGT 495
            D   +            + +S +D I    +  E + +    E        R+ + C  
Sbjct: 204 GDGSHE---------FHVLADSGEDEI----VYDEHSDFAANIEVAKDHPDKRNLKTCRG 250

Query: 496 IQVD--FNLPSRFN----AFYVNSHSEKCHPVMIHRAVFG-SIERFIGIMIENFKGN--- 545
           I+V   F L ++++    A ++N  S K  P+++    +G  + R I   IE    +   
Sbjct: 251 IEVGHIFQLGTKYSEAMKATFIN-QSGKPSPMIM--GCYGIGVSRIIAAAIEQNHDDKGI 307

Query: 546 -LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
             P  ++P + I+T I    +SS  E   ++  LL +    +  D R         E  +
Sbjct: 308 IFPESMAPFEVIITPIGYDKSSSVKEGVDDLYQLLIAEGYDVLLDDRGLRPGIMFSEAEL 367

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
             IP  I   +    E     +    T  + ++  D I
Sbjct: 368 IGIPHRITVSETTLKENKYEYKNRSKTDAEMIASNDLI 405


>gi|330807862|ref|YP_004352324.1| proline--tRNA ligase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327375970|gb|AEA67320.1| Proline--tRNA ligase (proline tRNA synthetase) [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 571

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/166 (24%), Positives = 75/166 (45%), Gaps = 9/166 (5%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           +QYL   ++    D   ++ ++ L    I +  SG+  W   G ++ + + + +R ++  
Sbjct: 4   SQYLLATQKETPSDAVVISHQLMLRAGMIRKLASGLYTWLPMGLRVMRKVEAIVREEMDA 63

Query: 290 DYE-EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
               E+  P      LWQ+SG W+ Y   +  +K      +  R F   P +      + 
Sbjct: 64  AGSLEVLMPGTQPAELWQESGRWEEYGPELLRIKD-----RHGRDFCAGPTHEEVITDLM 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
            + L SY++LP+ L +  + +R+E      GLMR R F   D++ F
Sbjct: 119 RNELSSYKQLPINLYQIQTKFRDEIRPRF-GLMRGREFIMKDSYSF 163


>gi|256824985|ref|YP_003148945.1| prolyl-tRNA synthetase [Kytococcus sedentarius DSM 20547]
 gi|256688378|gb|ACV06180.1| prolyl-tRNA synthetase, family II [Kytococcus sedentarius DSM
           20547]
          Length = 596

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 85/194 (43%), Gaps = 23/194 (11%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   HR L R   +  +A    G+  W   G K+ + +   +R +++    +EI  P 
Sbjct: 19  DAELPGHRLLVRAGYVRRVA---PGIYTWLPLGLKVMEKVKGIVREEMEAIGDQEIAFPS 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L +  ++ S  W  Y  ++F  +  D    D+       +  P H  +F   +K    S
Sbjct: 76  LLPREPYEASNRWTEYGDDLF--RLTDRKGADM-------LLGPTHEEMFTLAVKDLYTS 126

Query: 355 YRELPVRLAEFGSVYRNE--PSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
           Y++LP+ L +    YR+E  P     G++R R FT  DA+ F   E       + H    
Sbjct: 127 YKDLPLGLFQILPKYRDELRPRA---GVLRGREFTMKDAYSFDVDEAGLEAAYQRHRKAY 183

Query: 413 S-IYKDFGFEKIMV 425
           + ++   GFE + V
Sbjct: 184 TRVFDRLGFEYVAV 197


>gi|254479305|ref|ZP_05092645.1| Phosphoribulokinase / Uridine kinase family protein
           [Carboxydibrachium pacificum DSM 12653]
 gi|214034753|gb|EEB75487.1| Phosphoribulokinase / Uridine kinase family protein
           [Carboxydibrachium pacificum DSM 12653]
          Length = 547

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/182 (25%), Positives = 79/182 (43%), Gaps = 3/182 (1%)

Query: 17  FPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI-EIITPEDPRSLAVIRH 75
           +P +    D+A           VA  +N ++ DL+  + E S+ E +         + R 
Sbjct: 12  YPENTRLEDIARDFEHLYNGIIVAAKVNNELRDLNCTISEDSVVEFVDTTVEEGTRIYRR 71

Query: 76  SCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSP 135
           S   +  +AV+ + P   V I   +  G Y +       ++  +A I+ KM+EII ++  
Sbjct: 72  SLTFVFIKAVKELLPGATVTIEHSLGKGLYCEIHGYS-INNKIVASIKDKMKEIIDKNLK 130

Query: 136 FLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVK 195
             ++ L  E+A  LFE +    KV + +    KE V +Y      D    P V STG +K
Sbjct: 131 IERKMLPREEAIRLFEKEGLMEKVRLFKDT-DKEKVPVYYCDGTVDFFYSPCVPSTGYLK 189

Query: 196 KF 197
            F
Sbjct: 190 VF 191


>gi|206895814|ref|YP_002247094.1| prolyl-tRNA synthetase [Coprothermobacter proteolyticus DSM 5265]
 gi|226699133|sp|B5Y8J7|SYP_COPPD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|206738431|gb|ACI17509.1| prolyl-tRNA synthetase [Coprothermobacter proteolyticus DSM 5265]
          Length = 558

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/179 (23%), Positives = 87/179 (48%), Gaps = 13/179 (7%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
           +++E   H+ L R   +  IA   SGV  +   G K+ + + + +R ++ +   +E+   
Sbjct: 16  KDAEATSHKLLIRASMIKQIA---SGVYAFLPFGHKVLKKIETVVREEMDRIGGQEMTMS 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++   +W+++G W+ Y  +M  +K  D   +D   F L P +      +    + SY++
Sbjct: 73  IMMPAEMWKKTGRWELYGDDM--IKFKDRKEQD---FCLGPTHEEQITTLAGQLISSYKQ 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           LP  + +  + +R+EP     GL+R+R F   DA+ F   E+        ++ +++ YK
Sbjct: 128 LPQLVYQIQTKFRDEPRPRF-GLIRLREFVMKDAYSFHDSEESLKTT---YDQVLNAYK 182


>gi|20808197|ref|NP_623368.1| uridine kinase [Thermoanaerobacter tengcongensis MB4]
 gi|20516791|gb|AAM24972.1| Uridine kinase [Thermoanaerobacter tengcongensis MB4]
          Length = 547

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/182 (25%), Positives = 79/182 (43%), Gaps = 3/182 (1%)

Query: 17  FPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI-EIITPEDPRSLAVIRH 75
           +P +    D+A           VA  +N ++ DL+  + E S+ E +         + R 
Sbjct: 12  YPENTRLEDIARDFEHLYNGIIVAAKVNNELRDLNCTISEDSVVEFVDTTVEEGTRIYRR 71

Query: 76  SCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSP 135
           S   +  +AV+ + P   V I   +  G Y +       ++  +A I+ KM+EII ++  
Sbjct: 72  SLTFVFIKAVKELLPGATVTIEHSLGKGLYCEIHGYS-INNKIVASIKDKMKEIIDKNLK 130

Query: 136 FLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVK 195
             ++ L  E+A  LFE +    KV + +    KE V +Y      D    P V STG +K
Sbjct: 131 IERKMLPREEAIRLFEKEGLMEKVRLFKDT-DKEKVPVYYCDGTVDFFYSPCVPSTGYLK 189

Query: 196 KF 197
            F
Sbjct: 190 VF 191


>gi|167817496|ref|ZP_02449176.1| prolyl-tRNA synthetase [Burkholderia pseudomallei 91]
 gi|167847384|ref|ZP_02472892.1| prolyl-tRNA synthetase [Burkholderia pseudomallei B7210]
 gi|167904356|ref|ZP_02491561.1| prolyl-tRNA synthetase [Burkholderia pseudomallei NCTC 13177]
 gi|167912616|ref|ZP_02499707.1| prolyl-tRNA synthetase [Burkholderia pseudomallei 112]
          Length = 568

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 58/130 (44%), Gaps = 7/130 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P V    LWQ+SG W+ Y   +   K      +    F + P +      +  + +
Sbjct: 58  ELLMPAVQPAELWQESGRWEQYGPELLRFKD-----RKQNEFVIGPTHEEVVTDIARNQI 112

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLI 411
           KSYR++PV   +  + +R+E      G+MR R F   DA+ F    +   E   K+++  
Sbjct: 113 KSYRQMPVNFYQIQTKFRDEIRPRF-GVMRGREFIMKDAYSFDKDHESLKESYKKMYDAY 171

Query: 412 ISIYKDFGFE 421
           + I+   G E
Sbjct: 172 VRIFTRIGLE 181


>gi|257869604|ref|ZP_05649257.1| prolyl-tRNA synthetase [Enterococcus gallinarum EG2]
 gi|257803768|gb|EEV32590.1| prolyl-tRNA synthetase [Enterococcus gallinarum EG2]
          Length = 575

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/164 (23%), Positives = 73/164 (44%), Gaps = 10/164 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E   H+ L R   +  +A   +G+  +     ++ + +   MR ++ K D  E+  P 
Sbjct: 25  DAETLSHQLLVRAGYIRQVA---AGIYMYLPLAQRVLEKIKKLMREELAKIDAVEMTMPV 81

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L   LWQ +G    Y  +++ +     T ++ R + L P +      +    + SY+ L
Sbjct: 82  LLPLELWQSTGRDGLYGRSLYQL-----TDRNEREYVLGPTHEEPFTELIKSEISSYKRL 136

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN 402
           P+ L +  S YR+E      GL+R R F   D + F   E   +
Sbjct: 137 PISLYQIQSKYRDEQRPRF-GLIRSREFIMQDGYSFHADESSLD 179


>gi|167895971|ref|ZP_02483373.1| prolyl-tRNA synthetase [Burkholderia pseudomallei 7894]
          Length = 568

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 58/130 (44%), Gaps = 7/130 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P V    LWQ+SG W+ Y   +   K      +    F + P +      +  + +
Sbjct: 58  ELLMPAVQPAELWQESGRWEQYGPELLRFKD-----RKQNEFVIGPTHEEVVTDIARNQI 112

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLI 411
           KSYR++PV   +  + +R+E      G+MR R F   DA+ F    +   E   K+++  
Sbjct: 113 KSYRQMPVNFYQIQTKFRDEIRPRF-GVMRGREFIMKDAYSFDKDHESLKESYKKMYDAY 171

Query: 412 ISIYKDFGFE 421
           + I+   G E
Sbjct: 172 VRIFTRIGLE 181


>gi|226313026|ref|YP_002772920.1| prolyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
 gi|254782888|sp|C0ZF57|SYP_BREBN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226095974|dbj|BAH44416.1| prolyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
          Length = 581

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 61/130 (46%), Gaps = 7/130 (5%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           +E+  P +    LW Q+G WD Y   +  ++   D     R FAL P +     ++    
Sbjct: 67  QELLMPAMQPAELWHQTGRWDVYGPELVRLRDRHD-----RPFALGPTHEEVITSLVRDE 121

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNL 410
           + SY++LP+ L +  + +R+E      GL+R R F   DA+ F T +   +   + +++ 
Sbjct: 122 INSYKKLPINLYQIQTKFRDEVRPRF-GLIRCREFIMKDAYSFDTSQDGLDRNFQAMYDA 180

Query: 411 IISIYKDFGF 420
             +I+   G 
Sbjct: 181 YTNIFTRVGL 190


>gi|167740276|ref|ZP_02413050.1| prolyl-tRNA synthetase [Burkholderia pseudomallei 14]
          Length = 568

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 58/130 (44%), Gaps = 7/130 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P V    LWQ+SG W+ Y   +   K      +    F + P +      +  + +
Sbjct: 58  ELLMPAVQPAELWQESGRWEQYGPELLRFKD-----RKQNEFVIGPTHEEVVTDIARNQI 112

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLI 411
           KSYR++PV   +  + +R+E      G+MR R F   DA+ F    +   E   K+++  
Sbjct: 113 KSYRQMPVNFYQIQTKFRDEIRPRF-GVMRGREFIMKDAYSFDKDHESLKESYKKMYDAY 171

Query: 412 ISIYKDFGFE 421
           + I+   G E
Sbjct: 172 VRIFTRIGLE 181


>gi|167825898|ref|ZP_02457369.1| prolyl-tRNA synthetase [Burkholderia pseudomallei 9]
 gi|226196858|ref|ZP_03792437.1| proline--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
 gi|254299336|ref|ZP_04966786.1| prolyl-tRNA synthetase [Burkholderia pseudomallei 406e]
 gi|157809003|gb|EDO86173.1| prolyl-tRNA synthetase [Burkholderia pseudomallei 406e]
 gi|225931118|gb|EEH27126.1| proline--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
          Length = 578

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 58/130 (44%), Gaps = 7/130 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P V    LWQ+SG W+ Y   +   K      +    F + P +      +  + +
Sbjct: 68  ELLMPAVQPAELWQESGRWEQYGPELLRFKD-----RKQNEFVIGPTHEEVVTDIARNQI 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLI 411
           KSYR++PV   +  + +R+E      G+MR R F   DA+ F    +   E   K+++  
Sbjct: 123 KSYRQMPVNFYQIQTKFRDEIRPRF-GVMRGREFIMKDAYSFDKDHESLKESYKKMYDAY 181

Query: 412 ISIYKDFGFE 421
           + I+   G E
Sbjct: 182 VRIFTRIGLE 191


>gi|53720607|ref|YP_109593.1| prolyl-tRNA synthetase [Burkholderia pseudomallei K96243]
 gi|76808687|ref|YP_334889.1| prolyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
 gi|121599492|ref|YP_991789.1| prolyl-tRNA synthetase [Burkholderia mallei SAVP1]
 gi|124386640|ref|YP_001027282.1| prolyl-tRNA synthetase [Burkholderia mallei NCTC 10229]
 gi|126449387|ref|YP_001082781.1| prolyl-tRNA synthetase [Burkholderia mallei NCTC 10247]
 gi|126455301|ref|YP_001067757.1| prolyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|134280246|ref|ZP_01766957.1| prolyl-tRNA synthetase [Burkholderia pseudomallei 305]
 gi|167920563|ref|ZP_02507654.1| prolyl-tRNA synthetase [Burkholderia pseudomallei BCC215]
 gi|217421246|ref|ZP_03452751.1| proline--tRNA ligase [Burkholderia pseudomallei 576]
 gi|242316379|ref|ZP_04815395.1| proline--tRNA ligase [Burkholderia pseudomallei 1106b]
 gi|251766621|ref|ZP_02264460.2| proline--tRNA ligase [Burkholderia mallei PRL-20]
 gi|254178869|ref|ZP_04885523.1| prolyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
 gi|254180577|ref|ZP_04887175.1| prolyl-tRNA synthetase [Burkholderia pseudomallei 1655]
 gi|254190985|ref|ZP_04897491.1| prolyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
 gi|254199071|ref|ZP_04905486.1| prolyl-tRNA synthetase [Burkholderia pseudomallei S13]
 gi|254258028|ref|ZP_04949082.1| proline--tRNA ligase [Burkholderia pseudomallei 1710a]
 gi|81824656|sp|Q63QM5|SYP_BURPS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|114152176|sp|Q3JNG4|SYP_BURP1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|166980105|sp|A3MR95|SYP_BURM7 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|166980106|sp|A2S5R3|SYP_BURM9 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|166980107|sp|A1V0N6|SYP_BURMS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|166980108|sp|A3NZI6|SYP_BURP0 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|52211021|emb|CAH37009.1| prolyl-tRNA synthetase [Burkholderia pseudomallei K96243]
 gi|76578140|gb|ABA47615.1| prolyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
 gi|121228302|gb|ABM50820.1| prolyl-tRNA synthetase [Burkholderia mallei SAVP1]
 gi|124294660|gb|ABN03929.1| proline--tRNA ligase [Burkholderia mallei NCTC 10229]
 gi|126228943|gb|ABN92483.1| prolyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|126242257|gb|ABO05350.1| proline--tRNA ligase [Burkholderia mallei NCTC 10247]
 gi|134248253|gb|EBA48336.1| prolyl-tRNA synthetase [Burkholderia pseudomallei 305]
 gi|157938659|gb|EDO94329.1| prolyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
 gi|160694783|gb|EDP84791.1| prolyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
 gi|169656901|gb|EDS88298.1| prolyl-tRNA synthetase [Burkholderia pseudomallei S13]
 gi|184211116|gb|EDU08159.1| prolyl-tRNA synthetase [Burkholderia pseudomallei 1655]
 gi|217396658|gb|EEC36675.1| proline--tRNA ligase [Burkholderia pseudomallei 576]
 gi|242139618|gb|EES26020.1| proline--tRNA ligase [Burkholderia pseudomallei 1106b]
 gi|243065285|gb|EES47471.1| proline--tRNA ligase [Burkholderia mallei PRL-20]
 gi|254216717|gb|EET06101.1| proline--tRNA ligase [Burkholderia pseudomallei 1710a]
          Length = 578

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 58/130 (44%), Gaps = 7/130 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P V    LWQ+SG W+ Y   +   K      +    F + P +      +  + +
Sbjct: 68  ELLMPAVQPAELWQESGRWEQYGPELLRFKD-----RKQNEFVIGPTHEEVVTDIARNQI 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLI 411
           KSYR++PV   +  + +R+E      G+MR R F   DA+ F    +   E   K+++  
Sbjct: 123 KSYRQMPVNFYQIQTKFRDEIRPRF-GVMRGREFIMKDAYSFDKDHESLKESYKKMYDAY 181

Query: 412 ISIYKDFGFE 421
           + I+   G E
Sbjct: 182 VRIFTRIGLE 191


>gi|227484973|ref|ZP_03915289.1| alanine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172]
 gi|227237128|gb|EEI87143.1| alanine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172]
          Length = 872

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 73/149 (48%), Gaps = 21/149 (14%)

Query: 57  GSIEIITPEDPRSLAVIR-HSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPF 114
           GS+     +  R L + R HS  H++ +A++++  +     G ++ ED   +DF   +  
Sbjct: 545 GSVARFVIDLERRLDIQRNHSATHLLDKALKNVLGQNINQAGSLVDEDKLRFDFTYNKAL 604

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKE 169
           S++EL +IE+++   I    P  K+Y+ ++K+ E     LFE K              K+
Sbjct: 605 SNEELRKIEEEINAKIREQLPVKKEYMDYKKSEELGAVALFEDK-------------YKD 651

Query: 170 NVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
            V +   G++  +LC G HV +T +V  F
Sbjct: 652 IVRVVSMGDYSIELCGGCHVNNTAEVLMF 680


>gi|99034562|ref|ZP_01314532.1| hypothetical protein Wendoof_01000659 [Wolbachia endosymbiont of
           Drosophila willistoni TSC#14030-0811.24]
          Length = 339

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 81/367 (22%), Positives = 145/367 (39%), Gaps = 71/367 (19%)

Query: 309 GHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV 368
           G +D Y   M  +K  D   +D+      P +      +    +KSY++LP+ L +    
Sbjct: 1   GRYDDYGKEMLRIK--DRHEEDM---LFGPTHEEIATDLIRDVVKSYKDLPLCLYQIQWK 55

Query: 369 YRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKL 427
           +R+E     +G+MR R F   DA+ F    E   N    ++   I I+K  GF  I V+ 
Sbjct: 56  FRDEVR-PRYGVMRGREFLMKDAYSFDVDYEGALNSYNLMYKTYIKIFKRMGFTPIGVRA 114

Query: 428 STRP-----------EKRVGSDALWDD--------AENI-----MKGVLDTIKNS----- 458
            T P               G   L+ D        +E+I     +  V D + +      
Sbjct: 115 DTGPIGGNLSHEFHILANTGESTLYYDNKFSELLESEDIESLKSIYAVADDMHDPETCPI 174

Query: 459 SQDRINT--GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE 516
           SQ+++N   G+ +G   ++G K+   +K ++                           S+
Sbjct: 175 SQEQLNVSKGIEIGHIFYFGDKYSKPMKASV--------------------------TSQ 208

Query: 517 KCHPVMIHRAVFG-SIERFIGIMIENF---KGNL-PLWLSPIQAIVTTITSSAVEYAQEI 571
               V IH   +G  + R +G +IE F   KG + P  ++P +  +  + +   E A +I
Sbjct: 209 DGKNVNIHMGSYGIGVSRLVGAIIEAFHDDKGIIWPEEVAPFRIGLINLQTKVTEAADKI 268

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
              LKS    +  D    ++  K     +  +P  II G K  SE  + ++   +   ++
Sbjct: 269 YKALKSD--EVLYDDTEGSVGVKFSRMDLIGLPWQIIVGKKAVSENIVEVKNRATGEVKE 326

Query: 632 VSLLDAI 638
           + + +AI
Sbjct: 327 MQIEEAI 333


>gi|124022453|ref|YP_001016760.1| prolyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303]
 gi|152112941|sp|A2C7N5|SYP_PROM3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|123962739|gb|ABM77495.1| Prolyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303]
          Length = 599

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 65/134 (48%), Gaps = 6/134 (4%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINT--PQVLDQHLWQQSGHWDSYRANMFA 320
           SG+  +    W++ + + + ++ ++ D    + T  PQ+    LW++SG W  Y A    
Sbjct: 37  SGIYAYLPLMWRVLRKITAIVQEEM-DATGALETLLPQLQPAELWRRSGRWQGYTAGEGL 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +   +D  +  R   L P +     ++    L+SYR+LPV L +  S +R+E      GL
Sbjct: 96  MFHLED--RQGRELGLGPTHEEVITSLAGDLLRSYRQLPVTLYQIQSKFRDEIRPRF-GL 152

Query: 381 MRVRGFTQDDAHVF 394
           MR R F   DA+ F
Sbjct: 153 MRGREFIMKDAYSF 166


>gi|16800424|ref|NP_470692.1| prolyl-tRNA synthetase [Listeria innocua Clip11262]
 gi|81853975|sp|Q92C35|SYP_LISIN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|16413829|emb|CAC96587.1| prolyl-tRNA synthetase [Listeria innocua Clip11262]
          Length = 568

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 58/130 (44%), Gaps = 7/130 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +    LW +SG W  Y   +  +K      +  R F L P +     ++    +
Sbjct: 68  EMLMPALQPAELWHESGRWADYGPELMRLKD-----RAARDFVLGPTHEELITSLLRDEI 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI-HNLI 411
           KSY+ LP+ L +  + +R+E      GL+R R F   DA+ F    +  +E  ++ H   
Sbjct: 123 KSYKRLPITLYQIQTKFRDEKRPRF-GLLRGREFIMKDAYSFHATSESLDETFELMHQAY 181

Query: 412 ISIYKDFGFE 421
            +I+   G E
Sbjct: 182 SNIFSRCGLE 191


>gi|254569756|ref|XP_002491988.1| Protein with similarity to tRNA synthetases [Pichia pastoris GS115]
 gi|238031785|emb|CAY69708.1| Protein with similarity to tRNA synthetases [Pichia pastoris GS115]
 gi|328351517|emb|CCA37916.1| prolyl-tRNA synthetase [Pichia pastoris CBS 7435]
          Length = 564

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/186 (24%), Positives = 86/186 (46%), Gaps = 19/186 (10%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  +G++ W   G + ++ L + +R+++ +    E+    +  +HLW+++  WD+   
Sbjct: 41  IYQPAAGIVHWLPLGLRTYKKLQNVIRKRMDQAGGLEMELSSLSSKHLWERTKRWDN--N 98

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL-KSYRELPVRLAEFGSVYRNE--P 373
            +F  K + D     R + L P  C   +      L  SY++LP+ + +    YR+E  P
Sbjct: 99  ELFKFKDSKD-----RDYCLVP-TCEEEITNLVGDLCSSYKDLPLLVYQISRKYRDELRP 152

Query: 374 SGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
            G   GL+R R F   DA+ F  TKE        ++     I++D    K+ V ++    
Sbjct: 153 RG---GLLRGREFLMKDAYSFDLTKEDGLKSYDNVNEAYRRIFQDL---KLPVTVANADS 206

Query: 433 KRVGSD 438
             +G D
Sbjct: 207 GSIGGD 212


>gi|237813889|ref|YP_002898340.1| proline--tRNA ligase [Burkholderia pseudomallei MSHR346]
 gi|237505775|gb|ACQ98093.1| proline--tRNA ligase [Burkholderia pseudomallei MSHR346]
          Length = 578

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 58/130 (44%), Gaps = 7/130 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P V    LWQ+SG W+ Y   +   K      +    F + P +      +  + +
Sbjct: 68  ELLMPAVQPAELWQESGRWEQYGPELLRFKD-----RKQNEFVIGPTHEEVVTDIARNQI 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLI 411
           KSYR++PV   +  + +R+E      G+MR R F   DA+ F    +   E   K+++  
Sbjct: 123 KSYRQMPVNFYQIQTKFRDEIRPRF-GVMRGREFIMKDAYSFDKDHESLKESYKKMYDAY 181

Query: 412 ISIYKDFGFE 421
           + I+   G E
Sbjct: 182 VRIFTRIGLE 191


>gi|227486766|ref|ZP_03917082.1| proline--tRNA ligase [Anaerococcus lactolyticus ATCC 51172]
 gi|227235236|gb|EEI85251.1| proline--tRNA ligase [Anaerococcus lactolyticus ATCC 51172]
          Length = 563

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 71/157 (45%), Gaps = 12/157 (7%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYE--EINTP 297
           ++E   H+ L R      I +  SG+  +   G K+   + + +R  + D Y   E+ T 
Sbjct: 10  DAETASHKLLVRGA---FIRQQASGIYSFLPLGKKVLNKIEAIVRDAM-DSYGAIEVATS 65

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +  + +W +S  W+++   MF +K   +     R +AL P      V +    L SY++
Sbjct: 66  ILQPRQIWDKSTRWETFGPEMFKLKDRHE-----REYALGPTAEEAFVDLIKDELNSYKQ 120

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           LPV L +    +R+E      G+ R R F   DA+ F
Sbjct: 121 LPVNLYQIVDKFRDEKRPRF-GINRSRDFLMKDAYTF 156


>gi|294631730|ref|ZP_06710290.1| prolyl-tRNA synthetase [Streptomyces sp. e14]
 gi|292835063|gb|EFF93412.1| prolyl-tRNA synthetase [Streptomyces sp. e14]
          Length = 567

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 79/174 (45%), Gaps = 18/174 (10%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R     ++    +GV  W   G ++   +   +R ++     +E+  P 
Sbjct: 23  DAEVLSHKLLVRA---GYVRRTAAGVWSWLPLGRRVLANVERIVREEMDAIGAQEVLLPA 79

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L +  ++ +G WD Y   +F +K  D    D        +  P H  +F   +K    S
Sbjct: 80  LLPKEPYEATGRWDEYGGELFRLK--DRKGGDY-------LLGPTHEEIFTLLVKDQASS 130

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
           Y++LPV L +  S YR+E +    G++R R F   D++ F T ++   E   +H
Sbjct: 131 YKDLPVILYQIQSKYRDE-ARPRAGILRGREFLMKDSYSFDTADEGLAESYALH 183


>gi|291004232|ref|ZP_06562205.1| prolyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
          Length = 581

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/196 (22%), Positives = 88/196 (44%), Gaps = 19/196 (9%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   HR L R   +  I   G G+  W   G ++ + +   +R+++     +EI+ P 
Sbjct: 19  DAEVPSHRLLVRAGYVRRI---GPGIYSWLPLGLRVLRNIEEIVRQEMDAIGAQEIHFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L +  ++ +  W  Y  N+F +K  D    D        +  P H  +F   +K    S
Sbjct: 76  LLPKEPYEATNRWTEYGPNLFRLK--DRKGGDY-------LLGPTHEELFTLTVKGEYSS 126

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH-NLIIS 413
           Y++ PV L +  + YR+E      G++R R F   D++ F   ++      ++H +  I 
Sbjct: 127 YKDYPVILYQIQTKYRDEER-PRAGILRGREFVMKDSYSFDLDDEGLTNSYRLHRDAYIR 185

Query: 414 IYKDFGFEKIMVKLST 429
           I+   G   ++V  ++
Sbjct: 186 IFDRVGLRYVIVAATS 201


>gi|86608604|ref|YP_477366.1| prolyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|114152268|sp|Q2JMD8|SYP_SYNJB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|86557146|gb|ABD02103.1| prolyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 609

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 83/185 (44%), Gaps = 18/185 (9%)

Query: 229 QELTQYLYFL-----EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYM 283
           Q L+Q L+        E+E   H+ L R   +  ++    G+  +    W++ Q +   +
Sbjct: 5   QRLSQMLFVTLREDPVEAELPSHKLLLRGCFIRRLS---PGIYTYLPLLWRVLQKISEIV 61

Query: 284 RRKIKD-DYEEINTPQVLDQHLWQQSGHWDSY---RANMFAVKCADDTIKDLRTFALKPM 339
           R+++     +E   PQ+    +W++SG WD Y      MFA+K      +  R  +L P 
Sbjct: 62  RQEMNAIGGQECLLPQLQPAEIWRESGRWDVYTQAEGIMFALKD-----RQGREQSLGPT 116

Query: 340 NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQ 399
           +      +    ++SYR+LP  L +  + +R+E      GLMR R F   DA+ F   E+
Sbjct: 117 HEEVITLLARDLIRSYRQLPQTLYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSFHANEE 175

Query: 400 MFNEC 404
              + 
Sbjct: 176 SLRQT 180


>gi|257094575|ref|YP_003168216.1| prolyl-tRNA synthetase [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
 gi|257047099|gb|ACV36287.1| prolyl-tRNA synthetase [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
          Length = 574

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/191 (24%), Positives = 80/191 (41%), Gaps = 11/191 (5%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
            G+  W   G ++ + +   +R ++ +    E++ P V    LWQ+SG W+ Y   +  +
Sbjct: 37  GGIYTWMPIGLRVMRKVERIVREEMDRAGAIELSMPAVQPAELWQESGRWEKYGPEL--L 94

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           +C D   +  R F + P +      V    +KSYR+LP+   +    +R+E      G+M
Sbjct: 95  RCKD---RHQRDFVIGPTHEEVITDVVRKEVKSYRQLPLHFYQVQVKFRDEIRPRF-GVM 150

Query: 382 RVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGS--- 437
           R R F   D + F +  E +  E   +      I+   G +   V   T      GS   
Sbjct: 151 RGREFLMKDGYSFHSGFEDLQREYRNMFETYTRIFTRLGLQFRAVAADTGAIGGTGSHEF 210

Query: 438 DALWDDAENIM 448
             L D  E+ +
Sbjct: 211 HVLADSGEDAL 221


>gi|323341796|ref|ZP_08082029.1| proline--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
 gi|322464221|gb|EFY09414.1| proline--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
          Length = 569

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 68/139 (48%), Gaps = 7/139 (5%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
           +I +  SGV  +   G K+   + + +R ++   D +E+  P ++ + ++  SG  D   
Sbjct: 39  YIKKSSSGVYMYMPLGLKVKNKIENIIREEMNAIDAQEMTMPTLIPEDVYVASGRRDIIG 98

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            +MF +   DD  K  + F L P +           ++SY+++P  L +F + +R+E   
Sbjct: 99  TSMFQL---DDRFK--KPFVLGPTHEELFAQAAQMKIRSYKDMPFSLYQFQTKFRDEARP 153

Query: 376 SLHGLMRVRGFTQDDAHVF 394
              GL+RVR F   D++ F
Sbjct: 154 RF-GLIRVREFVMKDSYTF 171


>gi|228944201|ref|ZP_04106580.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228815590|gb|EEM61832.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
          Length = 476

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 83/400 (20%), Positives = 154/400 (38%), Gaps = 69/400 (17%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAV 321
           G +     G+ +++ +   M  K+K   +E +  P  + + L Q +  H + +   +  V
Sbjct: 37  GCMILRPYGYALWENMQKVMDEKLKATGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWV 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
               D  K      ++P +       F+  ++SY +LP    ++ SV R E +      +
Sbjct: 97  THGGDE-KLAERLCIRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKT--TRPFL 153

Query: 382 RVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           R   F   + H +  T E+   E L I NL  S  +D+    ++    T  EK  G+ A 
Sbjct: 154 RTTEFLWQEGHTIHETAEESQAETLNILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKAT 213

Query: 441 WDDAENIMKGVLDTIKNSSQD--RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
           +            TI++   D   + TG     G  +   F+    D  G+ WQ      
Sbjct: 214 Y------------TIESLMHDGKALQTGTSHNFGTNFSEAFDIKFLDRTGK-WQ------ 254

Query: 499 DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQ 554
                                   +H+  +G   R IG +I     N    +P  ++P+Q
Sbjct: 255 -----------------------YVHQTSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQ 291

Query: 555 AIVTTIT-------SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIII 607
            ++  I        + A+E    I  + +     ++ D  N+T  +K  E+ +K IPI +
Sbjct: 292 VVIVPIAQHKEGVLAKAIELQGHIQKVAR-----VKIDASNKTPGWKFNEYEMKGIPIRL 346

Query: 608 ICGDKEASERSIGIRRFGSTTTQKVS---LLDAIPILTKE 644
             G K+  +  + + R  +   + +S   L + IP L +E
Sbjct: 347 EVGPKDIEKNQVVLVRRDTKEKELISMDQLEERIPALLEE 386


>gi|116754929|ref|YP_844047.1| prolyl-tRNA synthetase [Methanosaeta thermophila PT]
 gi|121694244|sp|A0B9N3|SYP_METTP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|116666380|gb|ABK15407.1| prolyl-tRNA synthetase [Methanosaeta thermophila PT]
          Length = 478

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 83/415 (20%), Positives = 168/415 (40%), Gaps = 61/415 (14%)

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVL-DQHL 304
           + +L R  ++  +     G+  W+  G+ +   +   ++  +  D+ E   P ++ +   
Sbjct: 21  YHELLRSAEIVDVRYPVKGMSVWYPFGFALRSHVYQIIKELLDVDHYETQFPLLIPETEF 80

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
            +++ H   +   ++ V        D++  AL+P +      +    ++S+ +LP+R+ +
Sbjct: 81  MKEAEHIKGFEDEVYWVTHGGRDPLDIK-LALRPTSETAIYPMLKLWIRSHADLPLRIYQ 139

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQ-DDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
             + +R E +     L+R+R  T   +AH   T    + E      + I  Y +F + ++
Sbjct: 140 IVNTFRYE-TKHTRPLIRLREITSFKEAH---TAHATWEEAAMQVEIAIQRYIEF-YRRL 194

Query: 424 MVK--LSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            +   +S RP         WD                             GA Y    + 
Sbjct: 195 AIPCLVSKRPS--------WDKF--------------------------PGADYSIALDV 220

Query: 482 ILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           I+ D  GR  Q GT   +  N    +   Y + H E+ +   +++  +G  ER I  +I 
Sbjct: 221 IMPD--GRTLQVGTAHLLGTNFAKTYEITYEDEHGEQRY---VNQTCYGISERCIAALIA 275

Query: 541 ---NFKG-NLPLWLSPIQAIVTTIT----SSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
              + KG  LP  ++P+Q ++  I        +E  + IA+ L   ++ +  D  +E   
Sbjct: 276 VHGDDKGLVLPWRVAPVQVVIVPIIFGEREPIIEVCRSIASTLAGRNIRVRLDDGDERPG 335

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGI-RRFGSTTTQKVS--LLDAIPILTKE 644
            K  +  ++ +P+ I  G ++     + I RR G   T  +   L+DAI I  +E
Sbjct: 336 AKFYKWEMRGVPVRIEIGPRDIKNGVVTIVRRDGVRKTLPMDERLVDAILIEAEE 390


>gi|332289599|ref|YP_004420451.1| prolyl-tRNA synthetase [Gallibacterium anatis UMN179]
 gi|330432495|gb|AEC17554.1| prolyl-tRNA synthetase [Gallibacterium anatis UMN179]
          Length = 568

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/162 (22%), Positives = 69/162 (42%), Gaps = 8/162 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            +G+  W   G ++ + + + +R ++ K    E+  P V    LWQ+S  W+ Y   +  
Sbjct: 36  AAGLYTWLPTGVRVLKKVENIVREEMNKSGAIEVVMPVVQPADLWQESQRWEQYGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
                D     R F L P +      +    L SY++LP+ L +  + +R+E      G+
Sbjct: 96  FTDRGD-----RPFVLGPTHEEVITDLARRELSSYKQLPINLYQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKI-HNLIISIYKDFGFE 421
           MR R F   D + F   ++   +   + H    +I+   G +
Sbjct: 150 MRSREFIMKDGYSFHLDKESLQQTYDVMHQTYCNIFNRLGLD 191


>gi|325204335|gb|ADY99788.1| prolyl-tRNA synthetase [Neisseria meningitidis M01-240355]
          Length = 570

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 9/139 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I  + SG+  W   G ++ + + + +R ++ +    E+  P V    LWQ+SG W+ Y  
Sbjct: 32  IKANASGLYTWMPMGLRVLRKVENVVREEMARAGSVELLMPVVQPAELWQESGRWEFYXK 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVA-VFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            +  +K   D     R F + P  C   +A +    + SY++LP       + +R+E   
Sbjct: 92  ELLRLKDRHD-----RDFCMGP-TCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEVRP 145

Query: 376 SLHGLMRVRGFTQDDAHVF 394
              G+MR R F   DA+ F
Sbjct: 146 RF-GVMRAREFVMKDAYSF 163


>gi|187479380|ref|YP_787405.1| prolyl-tRNA synthetase [Bordetella avium 197N]
 gi|114152173|sp|Q2KVA0|SYP_BORA1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|115423967|emb|CAJ50520.1| prolyl-tRNA synthetase [Bordetella avium 197N]
          Length = 576

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 10/160 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQ 298
           ++E   H+ + R   +  +A    G+  +   G K+ + +   +R ++      E+  P 
Sbjct: 17  DAEVASHQLMTRAGMIRKLA---GGIYSYMPLGLKVIRKVEHIIREEMNASGAIELLMPV 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    LWQ+SG W+ Y   +  +K      +  R F L+P +      +  + + SYR+L
Sbjct: 74  VQPAELWQESGRWEQYGQELLRIKD-----RHQRDFVLQPTSEEVITDIARNEIHSYRQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE 398
           PV      + +R+E      G+MR R FT  DA+ F   E
Sbjct: 129 PVNFFHIQTKFRDERRPRF-GVMRGREFTMKDAYSFDRDE 167


>gi|13471387|ref|NP_102953.1| prolyl-tRNA synthetase [Mesorhizobium loti MAFF303099]
 gi|81855688|sp|Q98KS5|SYP_RHILO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|14022129|dbj|BAB48739.1| proline-tRNA ligase [Mesorhizobium loti MAFF303099]
          Length = 442

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 85/204 (41%), Gaps = 20/204 (9%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+E   HR + R      I + G G   W   G ++   +   +R  + +    EI  P 
Sbjct: 17  EAEIVSHRLMLRAG---MIRQQGQGSFSWLPLGKRVLDKVCQIIREEQNRAGALEILMPT 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW++SG ++ Y   M  +K   D     R     P N      +F   +KSY++L
Sbjct: 74  IQSADLWRESGRYNDYGKEMLRIKDRQD-----RDMLYGPTNEEMVTEIFRAYVKSYKDL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKD 417
           P+ L      +R+E      G+MR R F   DA+ F   +  F      +N + +S  + 
Sbjct: 129 PLNLYHIQWKFRDEVRPRF-GVMRSREFLMKDAYSF---DLDFEGARSAYNRMFVSYLRT 184

Query: 418 F---GFEKIMVKLSTRPEKRVGSD 438
           F   G + I ++  T P   +G D
Sbjct: 185 FTRMGLQAIPMRADTGP---IGGD 205


>gi|167586051|ref|ZP_02378439.1| prolyl-tRNA synthetase [Burkholderia ubonensis Bu]
          Length = 578

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 57/130 (43%), Gaps = 7/130 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P V    LWQ+SG W+ Y   +   K   D       F + P +      +  + +
Sbjct: 68  ELLMPAVQPAELWQESGRWEQYGPELLRFKDRKDN-----EFVIGPTHEEVITDIARNQI 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLI 411
           +SYR++PV   +  + +R+E      G+MR R F   DA+ F        E   K+++  
Sbjct: 123 RSYRQMPVNFYQIQTKFRDEIRPRF-GVMRGREFIMKDAYSFDKDADGLAESYRKMYDAY 181

Query: 412 ISIYKDFGFE 421
           + I+   G E
Sbjct: 182 VRIFTRLGLE 191


>gi|189218662|ref|YP_001939303.1| Alanyl-tRNA synthetase [Methylacidiphilum infernorum V4]
 gi|205830140|sp|B3E044|SYA_METI4 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|189185520|gb|ACD82705.1| Alanyl-tRNA synthetase [Methylacidiphilum infernorum V4]
          Length = 926

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 78/166 (46%), Gaps = 24/166 (14%)

Query: 50  LSDPVREGS-IEIITPEDPRSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYD 107
            +D ++ GS + +   E  R      H+  H++  A++ +  PE       +  D   +D
Sbjct: 551 FTDDLKPGSRVYLQVDEKRRRCIAAHHTATHLLHWALRKVLGPETLQRGSYVGPDRLRFD 610

Query: 108 FDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKAR------ELFESKKEAYKVEI 161
           F    P S++ELA+IE+ + E I  + P   +  S+EK +      +LF  +K   +V I
Sbjct: 611 FSHTGPLSAEELAEIERLVNEKIELNDPVTAEEESYEKVKNNPDILQLF-GEKYGQRVRI 669

Query: 162 LESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAY 207
           +       +V  Y +    +LC G HVRSTG++  F    K+ G Y
Sbjct: 670 V-------SVGRYSK----ELCGGTHVRSTGEIGYF----KILGEY 700


>gi|158424478|ref|YP_001525770.1| alanyl-tRNA synthetase [Azorhizobium caulinodans ORS 571]
 gi|205829980|sp|A8ICW8|SYA_AZOC5 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|158331367|dbj|BAF88852.1| alanyl-tRNA synthetase [Azorhizobium caulinodans ORS 571]
          Length = 881

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/153 (26%), Positives = 70/153 (45%), Gaps = 17/153 (11%)

Query: 54  VREGSIEIITP------EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYY 106
           V EG+++I TP         RS     HS  H++ EA++ +  +     G ++  D   +
Sbjct: 536 VTEGTLKIGTPLALEVDHARRSAVRANHSATHLLHEALRRVLGDHVAQKGSLVAPDRLRF 595

Query: 107 DFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEK-----ARELFESKKEAYKVEI 161
           DF   +P ++DELAQ+E      + R+ P   + ++ +      AR LF  +K   +V +
Sbjct: 596 DFSHPKPLTADELAQVEDIANTYVLRNEPVETRLMAVDDAVASGARALF-GEKYGDEVRV 654

Query: 162 LESIPAKENVTLYRQGEWFDLCRGPHVRSTGQV 194
           +       N   +      +LC G HV+ TG +
Sbjct: 655 VSMGTDSGNGAPFS----VELCGGTHVKRTGDI 683


>gi|49474193|ref|YP_032235.1| prolyl-tRNA synthetase [Bartonella quintana str. Toulouse]
 gi|81827622|sp|Q6FZX5|SYP_BARQU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|49239697|emb|CAF26072.1| Prolyl-tRNA synthetase [Bartonella quintana str. Toulouse]
          Length = 441

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 74/170 (43%), Gaps = 15/170 (8%)

Query: 231 LTQYLYFL-----EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
           L+QY   L     +E+E   HR + R      I +  SG+  W   G K+   +   +R 
Sbjct: 3   LSQYFLPLLKENPKEAEIISHRLMLRAG---MIRQQTSGIYSWLPLGKKVLDKVCKIIRE 59

Query: 286 -KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
            + +    EI  P V    LW++SG +D Y   M  +K  D   +DL      P N    
Sbjct: 60  EQERAGAVEILMPTVQSADLWRESGRYDDYGLEMLRIK--DRQKRDL---LYGPTNEEMV 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
             +F   + SY++LP+ L      +R+E      G+MR R F   DA+ F
Sbjct: 115 TDIFRSYVHSYKDLPLNLYHIQWKFRDEIRPRF-GVMRSREFLMKDAYSF 163


>gi|88855365|ref|ZP_01130029.1| prolyl-tRNA synthetase [marine actinobacterium PHSC20C1]
 gi|88815272|gb|EAR25130.1| prolyl-tRNA synthetase [marine actinobacterium PHSC20C1]
          Length = 593

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 85/192 (44%), Gaps = 19/192 (9%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   HR L R     +I     GV  W   G K+ + + + +R +++    +E+  P 
Sbjct: 19  DAEVASHRLLVRAG---YIRRQAPGVFAWLPLGLKVRRKIEAIIREELESFGAQEVLFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L +  ++ +G W  Y   +F +K   D    L          P H  VF   +K    S
Sbjct: 76  LLPREPYELTGRWTEYGDGIFRLKDRKDADYLL---------APTHEEVFTLLVKDLYSS 126

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH-NLIIS 413
           Y++LP+ L +    YR+E +    GL+R R F+  D++ F   +   +   + H +    
Sbjct: 127 YKDLPLSLYQIQDKYRDE-ARPRAGLLRGREFSMKDSYSFDYTDAGLDLSYQQHRDAYER 185

Query: 414 IYKDFGFEKIMV 425
           I+   G E ++V
Sbjct: 186 IFTRLGLEYVVV 197


>gi|17946007|gb|AAL49047.1| RE50565p [Drosophila melanogaster]
          Length = 310

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 104/212 (49%), Gaps = 25/212 (11%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKV-CDLSDPVREG-S 58
           +P D+ L   +G+I      +T  + A+ +S    K++    I+G V  D+  P++E  +
Sbjct: 65  LPEDVTLVM-NGNI------STPFNCAQHLSEGHCKRSALALIDGSVPWDMHRPLQESCT 117

Query: 59  IEIIT--PEDPRSL-AVIRHSCAHIMAEAVQSIW-PEVQVAI----GPIIEDG-FYYDF- 108
           ++++     +P  +      +C+ ++  A+   + PE  + +    GP I+ G F +D  
Sbjct: 118 LQLLNFHVSEPHVVNKAFWRTCSFMLGAALNRAFKPEANLQLHSFPGPNIKSGSFVHDIV 177

Query: 109 --DKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIP 166
              +      +E+  +  +M ++ A+D    +  +  + A+E+F+  K  YK E L SI 
Sbjct: 178 LQTQNWEPGKEEMRALSAEMVKLAAQDLRIERLDVQQDLAQEMFKDSK--YKSEQLPSIS 235

Query: 167 AKEN--VTLYRQGEWFDLCRGPHVRSTGQVKK 196
            + N  VTLYR G+  D+ RGP V ST  + K
Sbjct: 236 QQTNGRVTLYRLGDHIDISRGPMVASTSFLGK 267


>gi|302845190|ref|XP_002954134.1| hypothetical protein VOLCADRAFT_109913 [Volvox carteri f.
           nagariensis]
 gi|300260633|gb|EFJ44851.1| hypothetical protein VOLCADRAFT_109913 [Volvox carteri f.
           nagariensis]
          Length = 618

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 73/337 (21%), Positives = 134/337 (39%), Gaps = 65/337 (19%)

Query: 319 FAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE---PSG 375
           +  KC + T++  +  A++P +       F   ++S+R+LP+RL ++ +V R E   P+ 
Sbjct: 220 WVTKCGNSTME--KPIAIRPTSETVMYPYFAQWIRSHRDLPLRLNQWTNVVRWEFKYPT- 276

Query: 376 SLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
                +R R F   + H  F T+E+   E L I  L   +Y+D                 
Sbjct: 277 ---PFIRSREFLWQEGHTAFATQEEAAREVLDILELYRGVYEDM---------------- 317

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
                    A  + KG     K S +++         GAFY    E  + +  GR  Q  
Sbjct: 318 --------LAVPVTKG-----KKSKKEQF-------AGAFYTTTVEAYIPET-GRGIQGA 356

Query: 495 TIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLW 549
           T   +  N    F   + +   +K +   + +  +G   R +G+MI     +    LP  
Sbjct: 357 TSHCLGQNFSKMFGIQFEDDDRQKQY---VWQNSWGLTTRSLGVMIMTHADDKGLVLPPR 413

Query: 550 LSPIQAIVTTITSSA---------VEYAQEIANLLKSHHLSIETDFR-NETINYKIREHS 599
           ++P Q ++  I  ++         +E   E+A  L+   + + TD R N T  +K     
Sbjct: 414 VAPKQVVIIPIPKASTTPETVQAMMEKVTELAEALEKAGVRVVTDTRVNYTPGWKYNHWE 473

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
           +K +P+ +  G K+     + + R  +   + V   D
Sbjct: 474 LKGLPLRMELGPKDMENSVVVLARRDTGAKEAVPWTD 510


>gi|309783049|ref|ZP_07677768.1| proline--tRNA ligase [Ralstonia sp. 5_7_47FAA]
 gi|308918157|gb|EFP63835.1| proline--tRNA ligase [Ralstonia sp. 5_7_47FAA]
          Length = 574

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/162 (24%), Positives = 74/162 (45%), Gaps = 8/162 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           G+G+  +   G ++ + +   +R ++      E+  P V    LWQ++G WD     +  
Sbjct: 36  GAGLYTYMPVGLRVIRKVEQIVREEMNAAGAVEVLMPVVQPGELWQETGRWDKMGDELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            K   +     R F ++P +      +    ++SY++LPV   +  + +R+E      G+
Sbjct: 96  FKDRHE-----RDFVMQPTSEEVVTDIARTEIRSYKQLPVNFYQIQTKFRDERRPRF-GI 149

Query: 381 MRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFE 421
           MR R FT  DA+ F    E +     K+++    I++ FG E
Sbjct: 150 MRGREFTMKDAYSFDRDAEGLKVSYQKMYDAYTRIFQRFGLE 191


>gi|209521097|ref|ZP_03269827.1| prolyl-tRNA synthetase [Burkholderia sp. H160]
 gi|209498480|gb|EDZ98605.1| prolyl-tRNA synthetase [Burkholderia sp. H160]
          Length = 578

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 7/130 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P V    LWQ+SG W+ Y   +   K  D    D   F + P +      +  + +
Sbjct: 68  ELLMPAVQPAELWQESGRWEKYGPELLRFK--DRKQAD---FVMGPTHEEVVTDIARNQI 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLI 411
           KSYR+LPV   +  + +R+E      G+MR R F   D++ F    +   E   K+++  
Sbjct: 123 KSYRQLPVNFYQIQTKFRDEIRPRF-GVMRGREFIMKDSYSFDKDAEGLRESYRKMYDAY 181

Query: 412 ISIYKDFGFE 421
           + I+   G E
Sbjct: 182 VRIFTRLGLE 191


>gi|302657268|ref|XP_003020359.1| hypothetical protein TRV_05552 [Trichophyton verrucosum HKI 0517]
 gi|291184187|gb|EFE39741.1| hypothetical protein TRV_05552 [Trichophyton verrucosum HKI 0517]
          Length = 581

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 62/132 (46%), Gaps = 13/132 (9%)

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           Q LW++SG      + +F       T      F L P +      V +  +KSYR+LP+R
Sbjct: 66  QALWKKSGRLHDDDSEVFRFVDRKKT-----PFLLAPTHEEEITTVVSGLIKSYRDLPLR 120

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI----ISIYKD 417
           + +    YR+EP    HGL+R R F   D + F + E    E +K +N +    IS++K+
Sbjct: 121 VYQISRKYRDEPR-PRHGLLRGREFVMKDLYTFDSTEA---EAIKTYNTVKEAYISLFKE 176

Query: 418 FGFEKIMVKLST 429
                ++   S+
Sbjct: 177 LKLPYVVASASS 188


>gi|218885229|ref|YP_002434550.1| prolyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|226699140|sp|B8DNM5|SYP_DESVM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|218756183|gb|ACL07082.1| prolyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 575

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 63/133 (47%), Gaps = 7/133 (5%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG+  +   G K  +   + +R ++ +    E++ P V    LWQ+SG W+ Y   +   
Sbjct: 37  SGIYIYMPLGLKAIEKTAAIVREEMNRAGALELSMPMVQPADLWQESGRWEFYGKELLRF 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           +      ++ R + L P +      +    ++SYR+LP+ L +  + +R+E      GLM
Sbjct: 97  Q-----DRNGRDYCLGPTHEEVITDLVRGEVRSYRQLPINLYQIQTKFRDEIRPRF-GLM 150

Query: 382 RVRGFTQDDAHVF 394
           R R F   DA+ F
Sbjct: 151 RGREFIMKDAYSF 163


>gi|254465088|ref|ZP_05078499.1| alanyl-tRNA synthetase [Rhodobacterales bacterium Y4I]
 gi|206685996|gb|EDZ46478.1| alanyl-tRNA synthetase [Rhodobacterales bacterium Y4I]
          Length = 883

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/140 (25%), Positives = 65/140 (46%), Gaps = 5/140 (3%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPI-IEDGFYYDFDKEQPFSSDELAQIEK 124
           D RS     HS  H++ EA+++   E     G +   D   +DF   +  S++ELA++  
Sbjct: 553 DRRSKIRANHSATHLLHEALRNALGEHVAQKGSLNAADRLRFDFSHNKAMSAEELAKVGA 612

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESK--KEAYKVEILESIPAKENVTLYRQGEWF-- 180
           ++ + I +++P   + ++ + AREL       E Y  E+      +        G+ +  
Sbjct: 613 EVNDFIRQNTPVSTRIMTPDDARELGAQALFGEKYGDEVRVVSMGRAATGKGHDGDTYSI 672

Query: 181 DLCRGPHVRSTGQVKKFFKL 200
           +LC G HV+ TG +  F  L
Sbjct: 673 ELCGGTHVKQTGDIGTFVIL 692


>gi|206968558|ref|ZP_03229514.1| prolyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|206737478|gb|EDZ54625.1| prolyl-tRNA synthetase [Bacillus cereus AH1134]
          Length = 476

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 84/396 (21%), Positives = 154/396 (38%), Gaps = 61/396 (15%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHLWQ-QSGHWDSYRANMFAV 321
           G +     G+ +++ +   M  K+K+  +E +  P  + + L Q +  H + +   +  V
Sbjct: 37  GCMILRPYGYALWENMQKVMDEKLKETGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWV 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
               D  K      ++P +       F+  ++SY +LP    ++ SV R E +      +
Sbjct: 97  THGGDE-KLAERLCVRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKT--TRPFL 153

Query: 382 RVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           R   F   + H +  T E+   E L I NL +S  +D+    ++    T  EK  G+ A 
Sbjct: 154 RTTEFLWQEGHTIHETAEESQAETLNILNLYVSFCEDYLAIPVIKGQKTEKEKFAGAKAT 213

Query: 441 WDDAENIMKGVLDTIKNSSQD--RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
           +            TI++   D   + TG     G  +   F+    D  G+ WQ      
Sbjct: 214 Y------------TIESLMHDGKALQTGTSHNFGTNFSEAFDIKFLDRNGK-WQ------ 254

Query: 499 DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQ 554
                                   +H+  +G   R IG +I     N    +P  ++P+Q
Sbjct: 255 -----------------------YVHQTSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQ 291

Query: 555 AIVTTITSSAVEYAQEIANLLKSH---HLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
            ++  I     E     A  L++H      ++ D  N+T  +K  E+ +K IPI +  G 
Sbjct: 292 VVIVPIAQHK-EGVLAKATELQAHIQKVARVKIDASNKTPGWKFNEYEMKGIPIRLEVGP 350

Query: 612 KEASERSIGIRRFGSTTTQKV---SLLDAIPILTKE 644
           K+  +  + + R  +   + V    L + IP L +E
Sbjct: 351 KDIEKNQVVLVRRDTKEKEFVPMDQLEERIPALLEE 386


>gi|161870212|ref|YP_001599382.1| prolyl-tRNA synthetase [Neisseria meningitidis 053442]
 gi|161595765|gb|ABX73425.1| prolyl-tRNA synthetase [Neisseria meningitidis 053442]
          Length = 599

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 9/139 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I  + SG+  W   G ++ + + + +R ++ +    E+  P V    LWQ+SG W+ Y  
Sbjct: 61  IKANASGLYTWMPMGLRVLRKVENVVREEMARAGSVELLMPVVQPAELWQESGRWEFYGK 120

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVA-VFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            +  +K   D     R F + P  C   +A +    + SY++LP       + +R+E   
Sbjct: 121 ELLRLKDRHD-----RDFCMGP-TCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEVRP 174

Query: 376 SLHGLMRVRGFTQDDAHVF 394
              G+MR R F   DA+ F
Sbjct: 175 RF-GVMRAREFVMKDAYSF 192


>gi|220919010|ref|YP_002494314.1| alanyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219956864|gb|ACL67248.1| alanyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 905

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/148 (25%), Positives = 70/148 (47%), Gaps = 18/148 (12%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSS 116
           ++E+   +  R L    HS  H++  A++ +  E V+ A   +  D   +DF   QP + 
Sbjct: 578 AVELAVDDRRRDLVRANHSATHLLQFALREVLGEHVKQAGSVVAPDYLRFDFSHFQPVTE 637

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARE----LFESKKEAYKVEILESIPAKENVT 172
           +ELA +E+++ +++  ++      L  E+AR     +   +K    V ++   P+KE   
Sbjct: 638 EELAAVERRVNDLVRENAETETAVLKLEEARHAGAMMIFGEKYGDVVRVVRIGPSKE--- 694

Query: 173 LYRQGEWFDLCRGPHVRSTGQVKKFFKL 200
                    LC G HVR +G +  FFK+
Sbjct: 695 ---------LCGGTHVRRSGDI-AFFKI 712


>gi|197124228|ref|YP_002136179.1| alanyl-tRNA synthetase [Anaeromyxobacter sp. K]
 gi|196174077|gb|ACG75050.1| alanyl-tRNA synthetase [Anaeromyxobacter sp. K]
          Length = 905

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/148 (25%), Positives = 70/148 (47%), Gaps = 18/148 (12%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSS 116
           ++E+   +  R L    HS  H++  A++ +  E V+ A   +  D   +DF   QP + 
Sbjct: 578 AVELAVDDRRRDLVRANHSATHLLQFALREVLGEHVKQAGSVVAPDYLRFDFSHFQPVTE 637

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARE----LFESKKEAYKVEILESIPAKENVT 172
           +ELA +E+++ +++  ++      L  E+AR     +   +K    V ++   P+KE   
Sbjct: 638 EELAAVERRVNDLVRENAETETAVLKLEEARHAGAMMIFGEKYGDVVRVVRIGPSKE--- 694

Query: 173 LYRQGEWFDLCRGPHVRSTGQVKKFFKL 200
                    LC G HVR +G +  FFK+
Sbjct: 695 ---------LCGGTHVRRSGDI-AFFKI 712


>gi|282861434|ref|ZP_06270499.1| prolyl-tRNA synthetase [Streptomyces sp. ACTE]
 gi|282564092|gb|EFB69629.1| prolyl-tRNA synthetase [Streptomyces sp. ACTE]
          Length = 566

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/192 (22%), Positives = 91/192 (47%), Gaps = 19/192 (9%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E  +H+ L R     ++    +G+  W   G K+ + +   +R ++     +E+  P 
Sbjct: 21  DAETLNHKLLVRA---GYVRRTAAGLWSWLPLGKKVLENVSRVVREEMDAIGGQEVLLPA 77

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L +  ++ SG +D Y   +F        ++D +    + +  P H  +F   +K    S
Sbjct: 78  LLPKEPYEASGRYDEYGDLLF-------RLRDRK--GAEYLLGPTHEEIFTQVVKDMCSS 128

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI-IS 413
           Y++LPV L +  + YR+E +    G++R R F   D++ F T ++   E  ++H    I 
Sbjct: 129 YKDLPVILYQIQTKYRDE-ARPRAGVLRGREFQMKDSYSFDTTDEGLAESYQLHRAAYIR 187

Query: 414 IYKDFGFEKIMV 425
           I++  G +  +V
Sbjct: 188 IFERLGLDHRIV 199


>gi|241760072|ref|ZP_04758170.1| proline--tRNA ligase [Neisseria flavescens SK114]
 gi|241319526|gb|EER55956.1| proline--tRNA ligase [Neisseria flavescens SK114]
          Length = 595

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 9/139 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I  + SG+  W   G ++ + + + +R ++ +    E+  P V    LWQ+SG W+ Y  
Sbjct: 57  IKANASGLYTWMPMGLRVLRKVENIVREEMARAGSVELLMPVVQPAELWQESGRWEFYGK 116

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVA-VFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            +  +K   D     R F + P  C   +A +    + SY++LP       + +R+E   
Sbjct: 117 ELLRLKDRHD-----RDFCMGP-TCEEVIADIVRKEVNSYKQLPKNFYHIQTKFRDEVRP 170

Query: 376 SLHGLMRVRGFTQDDAHVF 394
              G+MR R F   DA+ F
Sbjct: 171 RF-GVMRAREFVMKDAYSF 188


>gi|229815406|ref|ZP_04445738.1| hypothetical protein COLINT_02454 [Collinsella intestinalis DSM
           13280]
 gi|229808939|gb|EEP44709.1| hypothetical protein COLINT_02454 [Collinsella intestinalis DSM
           13280]
          Length = 569

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/165 (23%), Positives = 75/165 (45%), Gaps = 10/165 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+E   HR + R      I +  +G+  +    W+  + +   +R ++     +E+  P 
Sbjct: 17  EAELASHRLMLR---AGMIRKQAAGLYSYLPLAWRSLRKIEDIVRDEMDAAGAQELLMPI 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D  +W++SG ++ Y   +  +     + +  R F L P +      +  + LKSY++L
Sbjct: 74  MVDAQVWRESGRYNVYGPELMRI-----SDRHEREFVLGPTHEETVTDLIKNELKSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE 403
           PV L +    +R+E      GLMR R F   D + F   ++   E
Sbjct: 129 PVNLYQIQDKFRDEMRPRF-GLMRGREFIMKDGYSFNATQESLQE 172


>gi|195327660|ref|XP_002030536.1| GM24519 [Drosophila sechellia]
 gi|195590346|ref|XP_002084907.1| GD12590 [Drosophila simulans]
 gi|194119479|gb|EDW41522.1| GM24519 [Drosophila sechellia]
 gi|194196916|gb|EDX10492.1| GD12590 [Drosophila simulans]
          Length = 333

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 62/233 (26%), Positives = 114/233 (48%), Gaps = 34/233 (14%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVC-DLSDPVREG-S 58
           +P D+ L   +G+I      +T  + A+ +S    K++    I+G V  D+  P++E  +
Sbjct: 65  LPEDVTLVM-NGNI------STPFNCAQHLSEGHCKRSALALIDGSVPWDMHRPLQESCT 117

Query: 59  IEIITPEDPRSLAVIR---HSCAHIMAEAVQSIW-PEVQVAI----GPIIEDG-FYYDFD 109
           ++++         V +    +C+ ++  A+   + PE  + +    GP I+ G F +D  
Sbjct: 118 LQLLNFHVSEPHVVNKAFWRTCSFMLGAALNRAFKPEANLQLHSFPGPNIKSGSFVHDIV 177

Query: 110 KE----QPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESI 165
            +    +P + +E+  +  +M ++ A+D    +  +  + A+E+F+  K  YK E L SI
Sbjct: 178 LQTQNWEP-AKEEMRALSAEMVKLAAQDLRIERLDVQQDLAQEMFKDSK--YKSEQLPSI 234

Query: 166 PAKEN--VTLYRQGEWFDLCRGPHVRSTGQVKK--FFKLMKVA-----GAYWR 209
             + N  VTLYR G+  D+ RGP V ST  + K       KVA     GA++R
Sbjct: 235 AQQTNGRVTLYRLGDHIDISRGPMVASTSFLGKCVISAAHKVAEEGPSGAFYR 287


>gi|163938386|ref|YP_001643270.1| prolyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|163860583|gb|ABY41642.1| prolyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
          Length = 476

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 80/396 (20%), Positives = 157/396 (39%), Gaps = 61/396 (15%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHLWQ-QSGHWDSYRANMFAV 321
           G +     G+ +++ +   M  K+K+  +E +  P  + + L Q +  H + +   +  V
Sbjct: 37  GCMILRPYGYALWENMQKVMDEKLKESGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWV 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
               D  K +    ++P +       F+  ++SY +LP    ++ SV R E +      +
Sbjct: 97  THGGDE-KLVERLCIRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKT--TRPFL 153

Query: 382 RVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           R   F   + H +  T E+   E L I NL  +  +++    ++    T  EK  G+ A 
Sbjct: 154 RTTEFLWQEGHTIHETAEESQIETLNILNLYAAFCEEYLAIPVIKGQKTEKEKFAGAKAT 213

Query: 441 WDDAENIMKGVLDTIKNSSQD--RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
           +            TI++   D   + TG     G  +   F+    D  G+ WQ      
Sbjct: 214 Y------------TIESLMHDGKALQTGTSHNFGTNFSEAFDIKFLDRNGK-WQ------ 254

Query: 499 DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQ 554
                                   +H+  +G   R IG +I     N    +P  ++P+Q
Sbjct: 255 -----------------------YVHQTSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQ 291

Query: 555 AIVTTITS---SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
            ++  I       +E A E+   ++     ++ D  N+T  +K  E+ +K +PI +  G 
Sbjct: 292 VVIVPIAQHKEGVLEKATELQGRIQKV-ARVKIDVSNKTPGWKFNEYEMKGVPIRLEVGP 350

Query: 612 KEASERSIGIRRFGSTTTQKVS---LLDAIPILTKE 644
           K+  +  + + R  +   + +S   L + IP+L +E
Sbjct: 351 KDIEKNQVVLVRRDTKEKEFISMDQLEERIPVLLEE 386


>gi|325136158|gb|EGC58766.1| prolyl-tRNA synthetase [Neisseria meningitidis M0579]
          Length = 599

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 9/139 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I  + SG+  W   G ++ + + + +R ++ +    E+  P V    LWQ+SG W+ Y  
Sbjct: 61  IKANASGLYTWMPMGLRVLRKVENVVREEMARAGSVELLMPVVQPAELWQESGRWEFYGK 120

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVA-VFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            +  +K   D     R F + P  C   +A +    + SY++LP       + +R+E   
Sbjct: 121 ELLRLKDRHD-----RDFCMGP-TCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEVRP 174

Query: 376 SLHGLMRVRGFTQDDAHVF 394
              G+MR R F   DA+ F
Sbjct: 175 RF-GVMRAREFVMKDAYSF 192


>gi|325128468|gb|EGC51349.1| prolyl-tRNA synthetase [Neisseria meningitidis N1568]
          Length = 570

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 9/139 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I  + SG+  W   G ++ + + + +R ++ +    E+  P V    LWQ+SG W+ Y  
Sbjct: 32  IKANASGLYTWMPMGLRVLRKVENVVREEMARAGSVELLMPVVQPAELWQESGRWEFYGK 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVA-VFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            +  +K   D     R F + P  C   +A +    + SY++LP       + +R+E   
Sbjct: 92  ELLRLKDRHD-----RDFCMGP-TCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEVRP 145

Query: 376 SLHGLMRVRGFTQDDAHVF 394
              G+MR R F   DA+ F
Sbjct: 146 RF-GVMRAREFVMKDAYSF 163


>gi|148255883|ref|YP_001240468.1| prolyl-tRNA synthetase [Bradyrhizobium sp. BTAi1]
 gi|166980102|sp|A5EK68|SYP_BRASB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|146408056|gb|ABQ36562.1| Prolyl-tRNA synthetase [Bradyrhizobium sp. BTAi1]
          Length = 444

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 86/202 (42%), Gaps = 14/202 (6%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTP 297
           +E+E   HR + R   L    ++ +G+  W   G+K+ + +   +R  + +    E+  P
Sbjct: 16  KEAEIVSHRLMLRAGML---RQEAAGIYAWLPLGFKVLKKIEQIVREEQNRAGALELLMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW++SG +D+Y   M  +     + +  R     P N      +F   +KSYR 
Sbjct: 73  TLQLADLWRESGRYDAYGPEMLRI-----SDRHKRELLYGPTNEEMITDIFRAYVKSYRN 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYK 416
           LP+ L      +R+E      G+MR R F   DA+ F   E        K+    +  + 
Sbjct: 128 LPLNLYHIQWKFRDEQRPRF-GVMRGREFLMKDAYSFDLDEAGARRAYNKMFVAYLRTFA 186

Query: 417 DFGFEKIMVKLSTRPEKRVGSD 438
             G + I ++  T P   +G D
Sbjct: 187 RMGLKGIPMRAETGP---IGGD 205


>gi|163759522|ref|ZP_02166607.1| prolyl-tRNA synthetase [Hoeflea phototrophica DFL-43]
 gi|162283119|gb|EDQ33405.1| prolyl-tRNA synthetase [Hoeflea phototrophica DFL-43]
          Length = 447

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 70/157 (44%), Gaps = 10/157 (6%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTP 297
           +++E   HR +AR      I +  +G+  W   G ++   + + +R  + +    EI  P
Sbjct: 16  KDAEIVSHRLMARAG---MIKQQSAGIYSWLPLGKRVLDKVCNIVREEQNRAGAIEILMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW++SG +D Y   M  +   +D     R     P N      +F   +KSY++
Sbjct: 73  TIQPADLWRESGRYDDYGQEMLRINDRND-----REMLFGPTNEEMVTDIFRSYVKSYKD 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           LP+ L      +R+E      G+MR R F   DA+ F
Sbjct: 128 LPLNLYHIQWKFRDERRPRF-GVMRGREFLMKDAYSF 163


>gi|70728636|ref|YP_258385.1| prolyl-tRNA synthetase [Pseudomonas fluorescens Pf-5]
 gi|114152231|sp|Q4KH98|SYP_PSEF5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|68342935|gb|AAY90541.1| prolyl-tRNA synthetase [Pseudomonas fluorescens Pf-5]
          Length = 571

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/194 (22%), Positives = 83/194 (42%), Gaps = 10/194 (5%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           +QYL   ++    D   ++ ++ L    I +  SG+  W   G ++ + + + +R ++  
Sbjct: 4   SQYLLATQKETPSDAVVISHQLMLRAGMIRKLASGLYTWLPMGLRVMRKVEAIVREEMNA 63

Query: 290 DYE-EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
               E+  P      LWQ+SG W+ Y   +   K      +  R F   P +      + 
Sbjct: 64  AGALEVLMPSTQPAELWQESGRWEEYGPELLRFKD-----RHGRDFCAGPTHEEVITDLA 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KI 407
            + L SY++LP+ L +  + +R+E      GLMR R F   DA+ F   +        ++
Sbjct: 119 RNELSSYKQLPLNLYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSFHADQASLQVTYDRM 177

Query: 408 HNLIISIYKDFGFE 421
           H    +++   G +
Sbjct: 178 HQAYCNVFTRLGLK 191


>gi|319410604|emb|CBY90973.1| prolyl-tRNA synthetase [Neisseria meningitidis WUE 2594]
          Length = 599

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 9/139 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I  + SG+  W   G ++ + + + +R ++ +    E+  P V    LWQ+SG W+ Y  
Sbjct: 61  IKANASGLYTWMPMGLRVLRKVENVVREEMARAGSVELLMPVVQPAELWQESGRWEFYGK 120

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVA-VFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            +  +K   D     R F + P  C   +A +    + SY++LP       + +R+E   
Sbjct: 121 ELLRLKDRHD-----RDFCMGP-TCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEVRP 174

Query: 376 SLHGLMRVRGFTQDDAHVF 394
              G+MR R F   DA+ F
Sbjct: 175 RF-GVMRAREFVMKDAYSF 192


>gi|308389457|gb|ADO31777.1| prolyl-tRNA synthetase [Neisseria meningitidis alpha710]
 gi|325130423|gb|EGC53187.1| prolyl-tRNA synthetase [Neisseria meningitidis OX99.30304]
 gi|325201951|gb|ADY97405.1| prolyl-tRNA synthetase [Neisseria meningitidis M01-240149]
          Length = 570

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 9/139 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I  + SG+  W   G ++ + + + +R ++ +    E+  P V    LWQ+SG W+ Y  
Sbjct: 32  IKANASGLYTWMPMGLRVLRKVENVVREEMARAGSVELLMPVVQPAELWQESGRWEFYGK 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVA-VFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            +  +K   D     R F + P  C   +A +    + SY++LP       + +R+E   
Sbjct: 92  ELLRLKDRHD-----RDFCMGP-TCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEVRP 145

Query: 376 SLHGLMRVRGFTQDDAHVF 394
              G+MR R F   DA+ F
Sbjct: 146 RF-GVMRAREFVMKDAYSF 163


>gi|299135009|ref|ZP_07028200.1| prolyl-tRNA synthetase [Afipia sp. 1NLS2]
 gi|298589986|gb|EFI50190.1| prolyl-tRNA synthetase [Afipia sp. 1NLS2]
          Length = 445

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/204 (23%), Positives = 89/204 (43%), Gaps = 18/204 (8%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTP 297
           +E+E   HR + R      + ++ +G+  W   G+++ + +   +R  + +    E+  P
Sbjct: 16  KEAEIVSHRLMLRAG---MMRQEAAGIYAWLPLGFRVLKKIEKIVREEQDRAGAIELLMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW++SG +D+Y   M  ++      +  R     P N      +F   +KSYR 
Sbjct: 73  TLQLADLWRESGRYDAYGPEMLRIQD-----RHKRELLYGPTNEEMITEIFRAYVKSYRS 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+ L      +R+E      G+MR R F   DA+ F   E      L  + + ++  + 
Sbjct: 128 LPLNLYHIQWKFRDEQRPRF-GVMRGREFLMKDAYSFDIDEAAAR--LSYNKMFVAYLRT 184

Query: 418 F---GFEKIMVKLSTRPEKRVGSD 438
           F   G + I ++  T P   +G D
Sbjct: 185 FARMGLKAIPMRAETGP---IGGD 205


>gi|187930129|ref|YP_001900616.1| prolyl-tRNA synthetase [Ralstonia pickettii 12J]
 gi|226701322|sp|B2UCU9|SYP_RALPJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|187727019|gb|ACD28184.1| prolyl-tRNA synthetase [Ralstonia pickettii 12J]
          Length = 574

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/162 (24%), Positives = 74/162 (45%), Gaps = 8/162 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           G+G+  +   G ++ + +   +R ++      E+  P V    LWQ++G WD     +  
Sbjct: 36  GAGLYTYMPVGLRVIRKVEQIVREEMNAAGAVEVLMPVVQPGELWQETGRWDKMGDELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            K   +     R F ++P +      +    ++SY++LPV   +  + +R+E      G+
Sbjct: 96  FKDRHE-----RDFVMQPTSEEVVTDIARTEIRSYKQLPVNFYQIQTKFRDERRPRF-GI 149

Query: 381 MRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFE 421
           MR R FT  DA+ F    E +     K+++    I++ FG E
Sbjct: 150 MRGREFTMKDAYSFDRDAEGLKVSYQKMYDAYTRIFQRFGLE 191


>gi|119504253|ref|ZP_01626333.1| prolyl-tRNA synthetase [marine gamma proteobacterium HTCC2080]
 gi|119459761|gb|EAW40856.1| prolyl-tRNA synthetase [marine gamma proteobacterium HTCC2080]
          Length = 569

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/161 (22%), Positives = 72/161 (44%), Gaps = 8/161 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            +G+  W   G ++ + +   +R ++ +    EI+ P V    LW +SG W+ Y   +  
Sbjct: 36  AAGIYNWMPLGLRVIRRVEKVVREEMCRAGALEISMPVVQPAELWLESGRWEQYGPELAR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           ++   +     R F L P +     A+    +KSY++LP+   +  + +R+E      G+
Sbjct: 96  LQDRHN-----RDFCLGPTHEEIITALGRSEIKSYKQLPLNFFQIQTKFRDEIRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGF 420
           MR R F   DA+ F   +    +   ++H    +I+   G 
Sbjct: 150 MRSREFIMKDAYSFHADQVSLEQTYWRMHEAYTAIFTRLGL 190


>gi|298368808|ref|ZP_06980126.1| proline--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
 gi|298282811|gb|EFI24298.1| proline--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
          Length = 569

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 9/139 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I  + SG+  W   G ++ + + + +R ++ +    E+  P V    LWQ+SG W+ Y  
Sbjct: 32  IKANASGLYTWMPMGLRVLRKVENVVREEMARAGSVELLMPVVQPAELWQESGRWEFYGK 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVA-VFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            +  +K   D     R F + P  C   +A +    + SY++LP       + +R+E   
Sbjct: 92  ELLRLKDRHD-----RDFCMGP-TCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEVRP 145

Query: 376 SLHGLMRVRGFTQDDAHVF 394
              G+MR R F   DA+ F
Sbjct: 146 RF-GVMRAREFVMKDAYSF 163


>gi|284799796|ref|ZP_05984887.2| proline--tRNA ligase [Neisseria subflava NJ9703]
 gi|284796829|gb|EFC52176.1| proline--tRNA ligase [Neisseria subflava NJ9703]
          Length = 595

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 9/139 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I  + SG+  W   G ++ + + + +R ++ +    E+  P V    LWQ+SG W+ Y  
Sbjct: 57  IKANASGLYTWMPMGLRVLRKVENIVREEMARAGSVELLMPVVQPAELWQESGRWEFYGK 116

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVA-VFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            +  +K   D     R F + P  C   +A +    + SY++LP       + +R+E   
Sbjct: 117 ELLRLKDRHD-----RDFCMGP-TCEEVIADIVRKEVNSYKQLPKNFYHIQTKFRDEVRP 170

Query: 376 SLHGLMRVRGFTQDDAHVF 394
              G+MR R F   DA+ F
Sbjct: 171 RF-GVMRAREFVMKDAYSF 188


>gi|333024111|ref|ZP_08452175.1| putative prolyl-tRNA synthetase [Streptomyces sp. Tu6071]
 gi|332743963|gb|EGJ74404.1| putative prolyl-tRNA synthetase [Streptomyces sp. Tu6071]
          Length = 563

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 79/174 (45%), Gaps = 18/174 (10%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R     ++    +G+  W   G K+   +   +R ++     +E+  P 
Sbjct: 21  DAETLSHKLLVRA---GYVRRTAAGIWSWLPLGKKVLDNISQIVREEMDAIGAQEVLLPA 77

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L +  ++ SG W+ Y   +F +K  D    D        +  P H  +F   +K    S
Sbjct: 78  LLPREPYEASGRWEEYGDLLFRLK--DRKGADY-------LLGPTHEEIFTQVVKDQCTS 128

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
           Y++LPV L +  + YR+E +    G++R R F   D++ F T ++   E   +H
Sbjct: 129 YKDLPVMLYQVQTKYRDE-ARPRSGVLRGREFVMKDSYSFDTTDEGLAESYALH 181


>gi|309804213|ref|ZP_07698290.1| proline--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
 gi|312875784|ref|ZP_07735776.1| proline--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
 gi|308163616|gb|EFO65886.1| proline--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
 gi|311088688|gb|EFQ47140.1| proline--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
          Length = 566

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 60/120 (50%), Gaps = 12/120 (10%)

Query: 287 IKDDYEEINTPQVLDQH-----LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           I+++ E IN P+++  H     LW++SG    Y   MF +K      +  R   L P + 
Sbjct: 57  IEEEMENINVPEMIMPHFLPATLWEESGRLPKYGPEMFRLKD-----RHGRESLLGPTHE 111

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQM 400
                +    +KSY+++P+ L +  + +R+E +    GL+R R F   D + F  T+EQ+
Sbjct: 112 ETFTEIIGKNIKSYKQMPIALYQIQTKFRDE-NRPRFGLLRGREFVMLDGYSFAATREQL 170


>gi|294668560|ref|ZP_06733657.1| proline--tRNA ligase [Neisseria elongata subsp. glycolytica ATCC
           29315]
 gi|291309523|gb|EFE50766.1| proline--tRNA ligase [Neisseria elongata subsp. glycolytica ATCC
           29315]
          Length = 569

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 9/139 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I  + SG+  W   G ++ + + + +R ++ +    E+  P V    LWQ+SG W+ Y  
Sbjct: 32  IKANASGLYTWMPMGLRVLRKVENVVREEMARAGSVELLMPVVQPAELWQESGRWEFYGK 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVA-VFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            +  +K   D     R F + P  C   +A +    + SY++LP       + +R+E   
Sbjct: 92  ELLRLKDRHD-----RDFCMGP-TCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEVRP 145

Query: 376 SLHGLMRVRGFTQDDAHVF 394
              G+MR R F   DA+ F
Sbjct: 146 RF-GVMRAREFVMKDAYSF 163


>gi|325911837|ref|ZP_08174241.1| proline--tRNA ligase [Lactobacillus iners UPII 143-D]
 gi|325476343|gb|EGC79505.1| proline--tRNA ligase [Lactobacillus iners UPII 143-D]
          Length = 566

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 60/120 (50%), Gaps = 12/120 (10%)

Query: 287 IKDDYEEINTPQVLDQH-----LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           I+++ E IN P+++  H     LW++SG    Y   MF +K      +  R   L P + 
Sbjct: 57  IEEEMENINVPEMIMPHFLPATLWEESGRLPKYGPEMFRLKD-----RHGRESLLGPTHE 111

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQM 400
                +    +KSY+++P+ L +  + +R+E +    GL+R R F   D + F  T+EQ+
Sbjct: 112 ETFTEIIGKNIKSYKQMPIALYQIQTKFRDE-NRPRFGLLRGREFVMLDGYSFAATREQL 170


>gi|325140439|gb|EGC62960.1| prolyl-tRNA synthetase [Neisseria meningitidis CU385]
          Length = 599

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 9/139 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I  + SG+  W   G ++ + + + +R ++ +    E+  P V    LWQ+SG W+ Y  
Sbjct: 61  IKANASGLYTWMPMGLRVLRKVENVVREEMARAGSVELLMPVVQPAELWQESGRWEFYGK 120

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVA-VFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            +  +K   D     R F + P  C   +A +    + SY++LP       + +R+E   
Sbjct: 121 ELLRLKDRHD-----RDFCMGP-TCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEVRP 174

Query: 376 SLHGLMRVRGFTQDDAHVF 394
              G+MR R F   DA+ F
Sbjct: 175 RF-GVMRAREFVMKDAYSF 192


>gi|78042796|ref|YP_360595.1| prolyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901]
 gi|114152179|sp|Q3AB89|SYP_CARHZ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|77994911|gb|ABB13810.1| prolyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901]
          Length = 569

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/161 (25%), Positives = 73/161 (45%), Gaps = 10/161 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+E   H+ L R      I +  SGV  +     ++ + ++  +R ++ +   +E+  P 
Sbjct: 17  EAEVISHKLLLRAG---FIRKSASGVYTYLPLAQRVLKKIMQIIREEMDRQGGQELMLPI 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW ++G W  Y   +F +K   +     R F L P +      +    ++SY+EL
Sbjct: 74  LQPAELWLETGRWHVYGPELFKLKDRHN-----RDFCLGPTHEEIITDLVRREVRSYKEL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQ 399
           P+ L +  + YR+E      GLMR R F   D + F   E+
Sbjct: 129 PLLLYQIQNKYRDEKRPRF-GLMRGREFIMKDLYSFDRDEE 168



 Score = 40.8 bits (94), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 35/154 (22%), Positives = 71/154 (46%), Gaps = 22/154 (14%)

Query: 505 RFNAFYVNSHSEK------CHPVMIHRAVFGSIERFIGIMIENFKGNLPLW---LSPIQA 555
           +  AFY++ + ++      C+ + + R +  ++E       +N   +  +W   ++P + 
Sbjct: 421 KMGAFYLDENGQQKPIIMGCYGIGVTRTMAAAVE-------QNHDEDGIIWPAAIAPFEV 473

Query: 556 IVTTITS---SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
           IV  +++     ++ A+E+ NLL +    +  D R+E    K ++  +  IP+ I  G +
Sbjct: 474 IVVPVSNKDEQQMKMAEEVYNLLLNAGFEVVIDDRDERPGVKFKDADLIGIPLRITVGKR 533

Query: 613 EASE--RSIGIRRFGSTTT-QKVSLLDAIPILTK 643
             SE    + IRR       QK  L+D +  L K
Sbjct: 534 TVSEGVYEVKIRRTREEKVFQKEELVDGLRQLLK 567


>gi|325913484|ref|ZP_08175850.1| proline--tRNA ligase [Lactobacillus iners UPII 60-B]
 gi|325477253|gb|EGC80399.1| proline--tRNA ligase [Lactobacillus iners UPII 60-B]
          Length = 566

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 60/120 (50%), Gaps = 12/120 (10%)

Query: 287 IKDDYEEINTPQVLDQH-----LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           I+++ E IN P+++  H     LW++SG    Y   MF +K      +  R   L P + 
Sbjct: 57  IEEEMENINVPEMIMPHFLPATLWEESGRLPKYGPEMFRLKD-----RHGRESLLGPTHE 111

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQM 400
                +    +KSY+++P+ L +  + +R+E +    GL+R R F   D + F  T+EQ+
Sbjct: 112 ETFTEIIGKNIKSYKQMPIALYQIQTKFRDE-NRPRFGLLRGREFVMLDGYSFAATREQL 170


>gi|325132465|gb|EGC55158.1| prolyl-tRNA synthetase [Neisseria meningitidis M6190]
          Length = 599

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 9/139 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I  + SG+  W   G ++ + + + +R ++ +    E+  P V    LWQ+SG W+ Y  
Sbjct: 61  IKANASGLYTWMPMGLRVLRKVENVVREEMARAGSVELLMPVVQPAELWQESGRWEFYGK 120

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVA-VFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            +  +K   D     R F + P  C   +A +    + SY++LP       + +R+E   
Sbjct: 121 ELLRLKDRHD-----RDFCMGP-TCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEVRP 174

Query: 376 SLHGLMRVRGFTQDDAHVF 394
              G+MR R F   DA+ F
Sbjct: 175 RF-GVMRAREFVMKDAYSF 192


>gi|317484633|ref|ZP_07943536.1| prolyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
 gi|316924107|gb|EFV45290.1| prolyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
          Length = 574

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 61/133 (45%), Gaps = 7/133 (5%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG+  W   G +      + +R ++ +   +EI  P V    LW++SG W+ Y   +   
Sbjct: 37  SGIYTWLPLGLRTLNKAANIVREEMDRAGAQEILMPTVQPADLWRESGRWEHYGKELLRF 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           K      +  R + L P +      +    ++SYR+LP+ L +  + +R+E      GLM
Sbjct: 97  K-----DRHERDYCLGPTHEEVVTDLIRGEVRSYRQLPMNLYQIQTKFRDEIRPRF-GLM 150

Query: 382 RVRGFTQDDAHVF 394
           R R F   DA+ F
Sbjct: 151 RGREFLMKDAYSF 163


>gi|302191444|ref|ZP_07267698.1| prolyl-tRNA synthetase [Lactobacillus iners AB-1]
          Length = 566

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 59/120 (49%), Gaps = 12/120 (10%)

Query: 287 IKDDYEEINTPQVLDQH-----LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           I+++ E IN P+++  H     LW++SG    Y   MF +K      +  R   L P + 
Sbjct: 57  IEEEMENINVPEMIMPHFLPATLWEESGRLPKYGPEMFRLKD-----RHGRESLLGPTHE 111

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQM 400
                +    +KSY+++P+ L +  + +R+E      GL+R R F   D + F  T+EQ+
Sbjct: 112 ETFTEIIGKNIKSYKQMPIALYQIQTKFRDENRPRF-GLLRGREFVMLDGYSFAATREQL 170


>gi|254673039|emb|CBA07634.1| Prolyl-tRNA synthetase [Neisseria meningitidis alpha275]
          Length = 599

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 9/139 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I  + SG+  W   G ++ + + + +R ++ +    E+  P V    LWQ+SG W+ Y  
Sbjct: 61  IKANASGLYTWMPMGLRVLRKVENVVREEMARAGSVELLMPVVQPAELWQESGRWEFYGK 120

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVA-VFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            +  +K   D     R F + P  C   +A +    + SY++LP       + +R+E   
Sbjct: 121 ELLRLKDRHD-----RDFCMGP-TCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEVRP 174

Query: 376 SLHGLMRVRGFTQDDAHVF 394
              G+MR R F   DA+ F
Sbjct: 175 RF-GVMRAREFVMKDAYSF 192


>gi|254669934|emb|CBA04522.1| Prolyl-tRNA synthetase [Neisseria meningitidis alpha153]
          Length = 570

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 9/139 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I  + SG+  W   G ++ + + + +R ++ +    E+  P V    LWQ+SG W+ Y  
Sbjct: 32  IKANASGLYTWMPMGLRVLRKVENVVREEMARAGSVELLMPVVQPAELWQESGRWEFYGK 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVA-VFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            +  +K   D     R F + P  C   +A +    + SY++LP       + +R+E   
Sbjct: 92  ELLRLKDRHD-----RDFCMGP-TCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEVRP 145

Query: 376 SLHGLMRVRGFTQDDAHVF 394
              G+MR R F   DA+ F
Sbjct: 146 RF-GVMRAREFVMKDAYSF 163


>gi|329919866|ref|ZP_08276804.1| proline--tRNA ligase [Lactobacillus iners SPIN 1401G]
 gi|328936956|gb|EGG33386.1| proline--tRNA ligase [Lactobacillus iners SPIN 1401G]
          Length = 566

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 60/120 (50%), Gaps = 12/120 (10%)

Query: 287 IKDDYEEINTPQVLDQH-----LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           I+++ E IN P+++  H     LW++SG    Y   MF +K      +  R   L P + 
Sbjct: 57  IEEEMENINVPEMIMPHFLPATLWEESGRLPKYGPEMFRLKD-----RHGRESLLGPTHE 111

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQM 400
                +    +KSY+++P+ L +  + +R+E +    GL+R R F   D + F  T+EQ+
Sbjct: 112 ETFTEIIGKNIKSYKQMPIALYQIQTKFRDE-NRPRFGLLRGREFVMLDGYSFAATREQL 170


>gi|316984142|gb|EFV63120.1| prolyl-tRNA synthetase [Neisseria meningitidis H44/76]
          Length = 599

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 9/139 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I  + SG+  W   G ++ + + + +R ++ +    E+  P V    LWQ+SG W+ Y  
Sbjct: 61  IKANASGLYTWMPMGLRVLRKVENVVREEMARAGSVELLMPVVQPAELWQESGRWEFYGK 120

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVA-VFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            +  +K   D     R F + P  C   +A +    + SY++LP       + +R+E   
Sbjct: 121 ELLRLKDRHD-----RDFCMGP-TCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEVRP 174

Query: 376 SLHGLMRVRGFTQDDAHVF 394
              G+MR R F   DA+ F
Sbjct: 175 RF-GVMRAREFVMKDAYSF 192


>gi|313668476|ref|YP_004048760.1| prolyl-tRNA synthetase [Neisseria lactamica ST-640]
 gi|313005938|emb|CBN87395.1| prolyl-tRNA synthetase [Neisseria lactamica 020-06]
          Length = 570

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 9/139 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I  + SG+  W   G ++ + + + +R ++ +    E+  P V    LWQ+SG W+ Y  
Sbjct: 32  IKANASGLYTWMPMGLRVLRKVENVVREEMARAGSVELLMPVVQPAELWQESGRWEFYGK 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVA-VFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            +  +K   D     R F + P  C   +A +    + SY++LP       + +R+E   
Sbjct: 92  ELLRLKDRHD-----RDFCMGP-TCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEVRP 145

Query: 376 SLHGLMRVRGFTQDDAHVF 394
              G+MR R F   DA+ F
Sbjct: 146 RF-GVMRAREFVMKDAYSF 163


>gi|304387349|ref|ZP_07369541.1| proline--tRNA ligase [Neisseria meningitidis ATCC 13091]
 gi|304338600|gb|EFM04718.1| proline--tRNA ligase [Neisseria meningitidis ATCC 13091]
          Length = 599

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 9/139 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I  + SG+  W   G ++ + + + +R ++ +    E+  P V    LWQ+SG W+ Y  
Sbjct: 61  IKANASGLYTWMPMGLRVLRKVENVVREEMARAGSVELLMPVVQPAELWQESGRWEFYGK 120

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVA-VFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            +  +K   D     R F + P  C   +A +    + SY++LP       + +R+E   
Sbjct: 121 ELLRLKDRHD-----RDFCMGP-TCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEVRP 174

Query: 376 SLHGLMRVRGFTQDDAHVF 394
              G+MR R F   DA+ F
Sbjct: 175 RF-GVMRAREFVMKDAYSF 192


>gi|269213497|ref|ZP_06158007.1| proline--tRNA ligase [Neisseria cinerea ATCC 14685]
 gi|269146261|gb|EEZ72679.1| proline--tRNA ligase [Neisseria cinerea ATCC 14685]
          Length = 594

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 9/139 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I  + SG+  W   G ++ + + + +R ++ +    E+  P V    LWQ+SG W+ Y  
Sbjct: 56  IKANASGLYTWMPMGLRVLRKVENVVREEMARAGSVELLMPVVQPAELWQESGRWEFYGK 115

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVA-VFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            +  +K   D     R F + P  C   +A +    + SY++LP       + +R+E   
Sbjct: 116 ELLRLKDRHD-----RDFCMGP-TCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEVRP 169

Query: 376 SLHGLMRVRGFTQDDAHVF 394
              G+MR R F   DA+ F
Sbjct: 170 RF-GVMRAREFVMKDAYSF 187


>gi|228931896|ref|ZP_04094792.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228827876|gb|EEM73614.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
          Length = 476

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 83/400 (20%), Positives = 154/400 (38%), Gaps = 69/400 (17%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAV 321
           G +     G+ +++ +   M  K+K   +E +  P  + + L Q +  H + +   +  V
Sbjct: 37  GCMILRPYGYALWENMQKVMDEKLKATGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWV 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
               D  K      ++P +       F+  ++SY +LP    ++ SV R E +      +
Sbjct: 97  THGGDE-KLAERLCIRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKT--TRPFL 153

Query: 382 RVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           R   F   + H +  T E+   E L I NL  S  +D+    ++    T  EK  G+ A 
Sbjct: 154 RTTEFLWQEGHTIHETAEESQAETLNILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKAT 213

Query: 441 WDDAENIMKGVLDTIKNSSQD--RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
           +            TI++   D   + TG     G  +   F+    D  G+ WQ      
Sbjct: 214 Y------------TIESLMHDGKALQTGTSHNFGTNFSEAFDIKFLDRTGK-WQ------ 254

Query: 499 DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQ 554
                                   +H+  +G   R IG +I     N    +P  ++P+Q
Sbjct: 255 -----------------------YVHQTSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQ 291

Query: 555 AIVTTIT-------SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIII 607
            ++  I        + A+E    I  + +     ++ D  N+T  +K  E+ +K IPI +
Sbjct: 292 VVIVPIAQHKEGVLAKAIELQGHIQKVAR-----VKIDASNKTPGWKFNEYEMKGIPIRL 346

Query: 608 ICGDKEASERSIGIRRFGSTTTQKVS---LLDAIPILTKE 644
             G K+  +  + + R  +   + +S   L + IP L +E
Sbjct: 347 EVGPKDIEKNQVVLVRRDTKEKEFISMDQLEERIPALLEE 386


>gi|255548247|ref|XP_002515180.1| prolyl-tRNA synthetase, putative [Ricinus communis]
 gi|223545660|gb|EEF47164.1| prolyl-tRNA synthetase, putative [Ricinus communis]
          Length = 501

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 71/317 (22%), Positives = 126/317 (39%), Gaps = 54/317 (17%)

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV- 393
           A++P +       ++  ++ +R+LP++L ++ +V R E S      +R R F   + H  
Sbjct: 121 AIRPTSETVMYPYYSKWIRGHRDLPLKLNQWCNVVRWEFSNPTP-FIRSREFLWQEGHTA 179

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
           F TKE+   E L+I  L   IY++F                         A  ++KG   
Sbjct: 180 FATKEEADEEVLQILELYRCIYEEF------------------------LAVPVVKG--- 212

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF-NAFYVN 512
             K S +++         G  Y    E  + +  GR  Q  T      L   F   F +N
Sbjct: 213 --KKSEREKF-------AGGLYTTSVEAFIPNT-GRGIQGATSHC---LGQNFAKMFEIN 259

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTTI------TS 562
             +EK    M+ +  +    R IG+M+     +  L L P    +Q IV  +      T 
Sbjct: 260 FENEKGEKGMVWQNSWAYSTRTIGVMVMVHGDDKGLVLPPKVASVQVIVIPVPYKDADTQ 319

Query: 563 SAVEYAQEIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
              +   E  + L    +  E+DFR N +  +K     +K +P+ I  G K+ +   +  
Sbjct: 320 GIFDACTETVDALCKVGIRAESDFRDNYSPGWKYSHWEVKGVPLRIEIGPKDLANNQVRT 379

Query: 622 RRFGSTTTQKVSLLDAI 638
            R  + T + +S ++ +
Sbjct: 380 VRRDNATKKDISRVNLV 396


>gi|324324493|gb|ADY19753.1| prolyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 476

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 83/400 (20%), Positives = 154/400 (38%), Gaps = 69/400 (17%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAV 321
           G +     G+ +++ +   M  K+K   +E +  P  + + L Q +  H + +   +  V
Sbjct: 37  GCMILRPYGYALWENMQKVMDEKLKATGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWV 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
               D  K      ++P +       F+  ++SY +LP    ++ SV R E +      +
Sbjct: 97  THGGDE-KLAERLCIRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKT--TRPFL 153

Query: 382 RVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           R   F   + H +  T E+   E L I NL  S  +D+    ++    T  EK  G+ A 
Sbjct: 154 RTTEFLWQEGHTIHETAEESQAETLNILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKAT 213

Query: 441 WDDAENIMKGVLDTIKNSSQD--RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
           +            TI++   D   + TG     G  +   F+    D  G+ WQ      
Sbjct: 214 Y------------TIESLMHDGKALQTGTSHNFGTNFSEAFDIKFLDRTGK-WQ------ 254

Query: 499 DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQ 554
                                   +H+  +G   R IG +I     N    +P  ++P+Q
Sbjct: 255 -----------------------YVHQTSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQ 291

Query: 555 AIVTTIT-------SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIII 607
            ++  I        + A+E    I  + +     ++ D  N+T  +K  E+ +K IPI +
Sbjct: 292 VVIVPIAQHKEGVLAKAIELQGHIQKVAR-----VKIDASNKTPGWKFNEYEMKGIPIRL 346

Query: 608 ICGDKEASERSIGIRRFGSTTTQKVS---LLDAIPILTKE 644
             G K+  +  + + R  +   + +S   L + IP L +E
Sbjct: 347 EVGPKDIEKNQVVLVRRDTKEKEFISMDQLEERIPALLEE 386


>gi|259501582|ref|ZP_05744484.1| proline-tRNA ligase [Lactobacillus iners DSM 13335]
 gi|259167100|gb|EEW51595.1| proline-tRNA ligase [Lactobacillus iners DSM 13335]
          Length = 581

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 59/120 (49%), Gaps = 12/120 (10%)

Query: 287 IKDDYEEINTPQVLDQH-----LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           I+++ E IN P+++  H     LW++SG    Y   MF +K      +  R   L P + 
Sbjct: 72  IEEEMENINVPEMIMPHFLPATLWEESGRLPKYGPEMFRLKD-----RHGRESLLGPTHE 126

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQM 400
                +    +KSY+++P+ L +  + +R+E      GL+R R F   D + F  T+EQ+
Sbjct: 127 ETFTEIIGKNIKSYKQMPIALYQIQTKFRDENRPRF-GLLRGREFVMLDGYSFAATREQL 185


>gi|312871363|ref|ZP_07731459.1| proline--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
 gi|312872484|ref|ZP_07732553.1| proline--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
 gi|312873339|ref|ZP_07733392.1| proline--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
 gi|311091129|gb|EFQ49520.1| proline--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
 gi|311092066|gb|EFQ50441.1| proline--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
 gi|311093115|gb|EFQ51463.1| proline--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
          Length = 566

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 60/120 (50%), Gaps = 12/120 (10%)

Query: 287 IKDDYEEINTPQVLDQH-----LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           I+++ E IN P+++  H     LW++SG    Y   MF +K      +  R   L P + 
Sbjct: 57  IEEEMENINVPEMIMPHFLPATLWEESGRLPKYGPEMFRLKD-----RHGRESLLGPTHE 111

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQM 400
                +    +KSY+++P+ L +  + +R+E +    GL+R R F   D + F  T+EQ+
Sbjct: 112 ETFTEIIGKNIKSYKQMPIALYQIQTKFRDE-NRPRFGLLRGREFVMLDGYSFAATREQL 170


>gi|296314467|ref|ZP_06864408.1| proline--tRNA ligase [Neisseria polysaccharea ATCC 43768]
 gi|296838764|gb|EFH22702.1| proline--tRNA ligase [Neisseria polysaccharea ATCC 43768]
          Length = 570

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 9/139 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I  + SG+  W   G ++ + + + +R ++ +    E+  P V    LWQ+SG W+ Y  
Sbjct: 32  IKANASGLYTWMPMGLRVLRKVENVVREEMARAGSVELLMPVVQPAELWQESGRWEFYGK 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVA-VFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            +  +K   D     R F + P  C   +A +    + SY++LP       + +R+E   
Sbjct: 92  ELLRLKDRHD-----RDFCMGP-TCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEVRP 145

Query: 376 SLHGLMRVRGFTQDDAHVF 394
              G+MR R F   DA+ F
Sbjct: 146 RF-GVMRAREFVMKDAYSF 163


>gi|168217778|ref|ZP_02643403.1| putative threonyl-tRNA synthetase/uridine kinase [Clostridium
           perfringens NCTC 8239]
 gi|182380136|gb|EDT77615.1| putative threonyl-tRNA synthetase/uridine kinase [Clostridium
           perfringens NCTC 8239]
          Length = 551

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 88/177 (49%), Gaps = 9/177 (5%)

Query: 26  VAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAEA 84
           + E I  +L K+        K  + +D +  +G IE+I   DP        +   +  +A
Sbjct: 30  INEKIPITLVKQG------NKYYEFTDLINNDGDIELINISDPHGKIAYSRTLQFVFIKA 83

Query: 85  VQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHE 144
              ++ + ++ I   I  G + +  KE+    +++ +I+KKMQEII ++    K  +  +
Sbjct: 84  TLDLFKDARINIEHSISKGTFGEIHKEKALDEEDILKIKKKMQEIINKNIIIEKIKMPKK 143

Query: 145 KARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLM 201
           +A ++F+S K   KV++L  +  +E V LY+  + +D   G    STG V K+F L+
Sbjct: 144 EAIDIFKSYKMQDKVDLLHWV-QEEYVNLYKLEDRYDYFYGDMAYSTG-VLKYFDLL 198


>gi|218901598|ref|YP_002449432.1| prolyl-tRNA synthetase [Bacillus cereus AH820]
 gi|228925648|ref|ZP_04088737.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|229120054|ref|ZP_04249309.1| Prolyl-tRNA synthetase 2 [Bacillus cereus 95/8201]
 gi|218539056|gb|ACK91454.1| prolyl-tRNA synthetase [Bacillus cereus AH820]
 gi|228663520|gb|EEL19105.1| Prolyl-tRNA synthetase 2 [Bacillus cereus 95/8201]
 gi|228834126|gb|EEM79674.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
          Length = 476

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 83/400 (20%), Positives = 154/400 (38%), Gaps = 69/400 (17%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAV 321
           G +     G+ +++ +   M  K+K   +E +  P  + + L Q +  H + +   +  V
Sbjct: 37  GCMILRPYGYALWENMQKVMDEKLKATGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWV 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
               D  K      ++P +       F+  ++SY +LP    ++ SV R E +      +
Sbjct: 97  THGGDE-KLAERLCIRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKT--TRPFL 153

Query: 382 RVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           R   F   + H +  T E+   E L I NL  S  +D+    ++    T  EK  G+ A 
Sbjct: 154 RTTEFLWQEGHTIHETAEESQAETLNILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKAT 213

Query: 441 WDDAENIMKGVLDTIKNSSQD--RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
           +            TI++   D   + TG     G  +   F+    D  G+ WQ      
Sbjct: 214 Y------------TIESLMHDGKALQTGTSHNFGTNFSEAFDIKFLDRTGK-WQ------ 254

Query: 499 DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQ 554
                                   +H+  +G   R IG +I     N    +P  ++P+Q
Sbjct: 255 -----------------------YVHQTSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQ 291

Query: 555 AIVTTIT-------SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIII 607
            ++  I        + A+E    I  + +     ++ D  N+T  +K  E+ +K IPI +
Sbjct: 292 VVIVPIAQHKEGVLAKAIELQGHIQKVAR-----VKIDASNKTPGWKFNEYEMKGIPIRL 346

Query: 608 ICGDKEASERSIGIRRFGSTTTQKVS---LLDAIPILTKE 644
             G K+  +  + + R  +   + +S   L + IP L +E
Sbjct: 347 EVGPKDIEKNQVVLVRRDTKEKEFISMDQLEERIPALLEE 386


>gi|82523942|emb|CAI78664.1| prolyl-tRNA synthetase [uncultured delta proteobacterium]
          Length = 574

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/137 (24%), Positives = 64/137 (46%), Gaps = 7/137 (5%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG+  +   G+++ + +   +R ++ K   +E+  P V    LW++SG W  Y   +   
Sbjct: 37  SGIYSYLPLGYRVIRKVEQIVREEMNKAGAQEVFMPMVQPSELWEESGRWVHYGKELLRF 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           +   D     R +   P +      +  + +K+YR+LP+ L +  + +R+E      G+M
Sbjct: 97  RDRHD-----RPYCFGPTHEEVITDLVRNDVKTYRQLPLNLYQIQTKFRDEVRPRF-GVM 150

Query: 382 RVRGFTQDDAHVFCTKE 398
           R R F   DA+ F   E
Sbjct: 151 RCREFGMKDAYSFDADE 167


>gi|269956006|ref|YP_003325795.1| prolyl-tRNA synthetase [Xylanimonas cellulosilytica DSM 15894]
 gi|269304687|gb|ACZ30237.1| prolyl-tRNA synthetase [Xylanimonas cellulosilytica DSM 15894]
          Length = 607

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/192 (22%), Positives = 87/192 (45%), Gaps = 19/192 (9%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   HR L R     +I     G+  W   G ++   + + +R ++     +E++ P 
Sbjct: 27  DAEVASHRLLIRAG---YIRRAAPGIYTWLPLGLRVLAKVEAIVREEMAAIGGQEVHFPA 83

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L +  ++ +G W+ Y  N+F  +  D    D        +  P H  +F   +K    S
Sbjct: 84  LLPREPYEATGRWEEYGPNLF--RLQDRKRADY-------LLAPTHEEMFTLLVKDLYSS 134

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH-NLIIS 413
           Y++LP+ L +  + YR+E +    GL+R R F   D++ F   +   +E  + H +    
Sbjct: 135 YKDLPLTLFQIQTKYRDE-ARPRAGLIRGREFVMKDSYSFDHTDAGLDEAYQRHRDAYER 193

Query: 414 IYKDFGFEKIMV 425
           I+   G + ++V
Sbjct: 194 IFTRLGLDYVIV 205


>gi|15677205|ref|NP_274358.1| prolyl-tRNA synthetase [Neisseria meningitidis MC58]
 gi|81857571|sp|Q9JZ14|SYP_NEIMB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|7226583|gb|AAF41714.1| prolyl-tRNA synthetase [Neisseria meningitidis MC58]
 gi|325134423|gb|EGC57068.1| prolyl-tRNA synthetase [Neisseria meningitidis M13399]
 gi|325200038|gb|ADY95493.1| prolyl-tRNA synthetase [Neisseria meningitidis H44/76]
          Length = 570

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 9/139 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I  + SG+  W   G ++ + + + +R ++ +    E+  P V    LWQ+SG W+ Y  
Sbjct: 32  IKANASGLYTWMPMGLRVLRKVENVVREEMARAGSVELLMPVVQPAELWQESGRWEFYGK 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVA-VFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            +  +K   D     R F + P  C   +A +    + SY++LP       + +R+E   
Sbjct: 92  ELLRLKDRHD-----RDFCMGP-TCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEVRP 145

Query: 376 SLHGLMRVRGFTQDDAHVF 394
              G+MR R F   DA+ F
Sbjct: 146 RF-GVMRAREFVMKDAYSF 163


>gi|261392382|emb|CAX49924.1| prolyl-tRNA synthetase (proline--tRNA ligase; ProRS; global RNA
           synthesis factor) [Neisseria meningitidis 8013]
          Length = 570

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 9/139 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I  + SG+  W   G ++ + + + +R ++ +    E+  P V    LWQ+SG W+ Y  
Sbjct: 32  IKANASGLYTWMPMGLRVLRKVENVVREEMARAGSVELLMPVVQPAELWQESGRWEFYGK 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVA-VFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            +  +K   D     R F + P  C   +A +    + SY++LP       + +R+E   
Sbjct: 92  ELLRLKDRHD-----RDFCMGP-TCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEVRP 145

Query: 376 SLHGLMRVRGFTQDDAHVF 394
              G+MR R F   DA+ F
Sbjct: 146 RF-GVMRAREFVMKDAYSF 163


>gi|225076521|ref|ZP_03719720.1| hypothetical protein NEIFLAOT_01569 [Neisseria flavescens
           NRL30031/H210]
 gi|224952200|gb|EEG33409.1| hypothetical protein NEIFLAOT_01569 [Neisseria flavescens
           NRL30031/H210]
          Length = 570

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 9/139 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I  + SG+  W   G ++ + + + +R ++ +    E+  P V    LWQ+SG W+ Y  
Sbjct: 32  IKANASGLYTWMPMGLRVLRKVENIVREEMARAGSVELLMPVVQPAELWQESGRWEFYGK 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVA-VFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            +  +K   D     R F + P  C   +A +    + SY++LP       + +R+E   
Sbjct: 92  ELLRLKDRHD-----RDFCMGP-TCEEVIADIVRKEVNSYKQLPKNFYHIQTKFRDEVRP 145

Query: 376 SLHGLMRVRGFTQDDAHVF 394
              G+MR R F   DA+ F
Sbjct: 146 RF-GVMRAREFVMKDAYSF 163


>gi|153951507|ref|YP_001398463.1| alanyl-tRNA synthetase [Campylobacter jejuni subsp. doylei 269.97]
 gi|205830016|sp|A7H4N3|SYA_CAMJD RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|152938953|gb|ABS43694.1| alanyl-tRNA synthetase [Campylobacter jejuni subsp. doylei 269.97]
          Length = 842

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/196 (23%), Positives = 86/196 (43%), Gaps = 24/196 (12%)

Query: 14  IKNFPVHAT-GSDVAES---ISRSLAKKAVAVAINGKVCDLSDPVREGSIEIITPEDPRS 69
           ++N P +AT G   A+S     R +        +N       + ++ G+I     +  + 
Sbjct: 483 LENTPFYATSGGQSADSGFIAKREVLDTQKFFNLNLSFIKAGEELKVGTIAHARIDAEKR 542

Query: 70  LAVIRH-SCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQ 127
             + RH S  H++  A++ I        G ++E +   +DF   +  S +EL  IEK++ 
Sbjct: 543 EQIARHHSATHLLHHALREILGSHVSQAGSLVESNKLRFDFTHHKALSKEELESIEKRVN 602

Query: 128 EIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E+I   S  + + +  E+A++     LF  K +              NV +   GE  +L
Sbjct: 603 EMIINSSEAILENMPLEEAKKSGAIALFNEKYQG-------------NVRVLTLGESKEL 649

Query: 183 CRGPHVRSTGQVKKFF 198
           C G HV++T Q+  F+
Sbjct: 650 CGGTHVKNTAQIGSFY 665


>gi|29840011|ref|NP_829117.1| prolyl-tRNA synthetase [Chlamydophila caviae GPIC]
 gi|81838013|sp|Q824A9|SYP_CHLCV RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|29834358|gb|AAP04995.1| prolyl-tRNA synthetase [Chlamydophila caviae GPIC]
          Length = 577

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/174 (22%), Positives = 79/174 (45%), Gaps = 14/174 (8%)

Query: 263 SGVIFWHRKG--------WKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDS 313
           +G IF   KG        W++   ++  +R ++     +E+  P +    LWQ++G W++
Sbjct: 29  AGYIFKTAKGIYTYTPLFWRVALKMMDIVREELNAIGGQELVLPILHPAELWQKTGRWEA 88

Query: 314 YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP 373
           +R+        D   K+L    L P +        +  L   ++LP+ L +  + +R+E 
Sbjct: 89  FRSEGLLYTLTDREDKEL---CLAPTHEEVVSMFVSQWLSGRKQLPIHLYQIATKFRDEI 145

Query: 374 SGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKDFGFEKIMVK 426
                GLMR R F  +D++ F  + EQM  +  K+     +I+     + ++V+
Sbjct: 146 RPRF-GLMRAREFLMEDSYTFSDSPEQMNEQYAKLRQAYQNIFDRLEIKYVIVE 198


>gi|254805135|ref|YP_003083356.1| Prolyl-tRNA synthetase [Neisseria meningitidis alpha14]
 gi|254668677|emb|CBA06388.1| Prolyl-tRNA synthetase [Neisseria meningitidis alpha14]
          Length = 570

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 9/139 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I  + SG+  W   G ++ + + + +R ++ +    E+  P V    LWQ+SG W+ Y  
Sbjct: 32  IKANASGLYTWMPMGLRVLRKVENVVREEMARAGSVELLMPVVQPAELWQESGRWEFYGK 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVA-VFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            +  +K   D     R F + P  C   +A +    + SY++LP       + +R+E   
Sbjct: 92  ELLRLKDRHD-----RDFCMGP-TCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEVRP 145

Query: 376 SLHGLMRVRGFTQDDAHVF 394
              G+MR R F   DA+ F
Sbjct: 146 RF-GVMRAREFVMKDAYSF 163


>gi|241664234|ref|YP_002982594.1| prolyl-tRNA synthetase [Ralstonia pickettii 12D]
 gi|240866261|gb|ACS63922.1| prolyl-tRNA synthetase [Ralstonia pickettii 12D]
          Length = 574

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/162 (24%), Positives = 74/162 (45%), Gaps = 8/162 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           G+G+  +   G ++ + +   +R ++      E+  P V    LWQ++G WD     +  
Sbjct: 36  GAGLYTYMPVGLRVIRKVEQIVREEMNAAGAVEVLMPVVQPGELWQETGRWDKMGDELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            K   +     R F ++P +      +    ++SY++LPV   +  + +R+E      G+
Sbjct: 96  FKDRHE-----RDFVMQPTSEEVVTDIARTEIRSYKQLPVNFYQIQTKFRDERRPRF-GI 149

Query: 381 MRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFE 421
           MR R FT  DA+ F    E +     K+++    I++ FG E
Sbjct: 150 MRGREFTMKDAYSFDRDAEGLKLSYQKMYDAYTRIFQRFGLE 191


>gi|218768358|ref|YP_002342870.1| prolyl-tRNA synthetase [Neisseria meningitidis Z2491]
 gi|81857470|sp|Q9JU09|SYP_NEIMA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|121052366|emb|CAM08698.1| prolyl-tRNA synthetase [Neisseria meningitidis Z2491]
          Length = 570

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 9/139 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I  + SG+  W   G ++ + + + +R ++ +    E+  P V    LWQ+SG W+ Y  
Sbjct: 32  IKANASGLYTWMPMGLRVLRKVENVVREEMARAGSVELLMPVVQPAELWQESGRWEFYGK 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVA-VFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            +  +K   D     R F + P  C   +A +    + SY++LP       + +R+E   
Sbjct: 92  ELLRLKDRHD-----RDFCMGP-TCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEVRP 145

Query: 376 SLHGLMRVRGFTQDDAHVF 394
              G+MR R F   DA+ F
Sbjct: 146 RF-GVMRAREFVMKDAYSF 163


>gi|325923311|ref|ZP_08184984.1| prolyl-tRNA synthetase, family II [Xanthomonas gardneri ATCC 19865]
 gi|325546238|gb|EGD17419.1| prolyl-tRNA synthetase, family II [Xanthomonas gardneri ATCC 19865]
          Length = 564

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/202 (21%), Positives = 84/202 (41%), Gaps = 14/202 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E   HR + R   +  +A   SG+  W   G ++ + + + +R ++ +    E+  P 
Sbjct: 17  DAELVSHRLMLRAGMIRKLA---SGLYTWSPLGLRVLRKVEAIVREEMNRAGAVEVLFPT 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +  + LW  +G W+ +   +  +K   +     + F   P             + SY++L
Sbjct: 74  IQPRELWDATGRWEKFGGQLLKIKDRKE-----QEFCYSPTAEEAAAEFARQEINSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKD 417
           P+   +  + +R+E      G+MR R F   DA+ F  T E M  E   +      I+  
Sbjct: 129 PLNFYQIQTKFRDEIRPRF-GVMRAREFLMKDAYSFHLTDEDMAREYDNMRAAYTRIFTR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDA 439
            G E   V+  +     +G DA
Sbjct: 188 LGLEFRAVQADS---GAIGGDA 206


>gi|307544897|ref|YP_003897376.1| prolyl-tRNA synthetase [Halomonas elongata DSM 2581]
 gi|307216921|emb|CBV42191.1| prolyl-tRNA synthetase [Halomonas elongata DSM 2581]
          Length = 573

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/161 (21%), Positives = 72/161 (44%), Gaps = 8/161 (4%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           +G+  W   G +  + + + +R ++ +   +E+  P +    LWQ+SG WD Y   +  +
Sbjct: 37  AGLYTWLPLGLRTLRKVENIVREEMNRAGAQEVLMPAIQPAELWQESGRWDQYGNLLLRI 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           +   D     R F   P +      +  + L+SY+++P    +  + +R+E +    G+M
Sbjct: 97  RDRHD-----RDFCYGPTHEEVITDLVRNELRSYKQVPSNFYQIQTKFRDE-TRPRFGVM 150

Query: 382 RVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFE 421
           R R F   DA+ F   +         +++  + I+   G +
Sbjct: 151 RAREFIMKDAYSFDVDQAGLQRSYDAMYDAYVRIFTRLGLD 191


>gi|302522218|ref|ZP_07274560.1| prolyl-tRNA synthetase [Streptomyces sp. SPB78]
 gi|302431113|gb|EFL02929.1| prolyl-tRNA synthetase [Streptomyces sp. SPB78]
          Length = 563

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 79/174 (45%), Gaps = 18/174 (10%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R     ++    +G+  W   G K+   +   +R ++     +E+  P 
Sbjct: 21  DAETLSHKLLVRA---GYVRRTAAGIWSWLPLGKKVLDNISQIVREEMDAIGAQEVLLPA 77

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L +  ++ SG W+ Y   +F +K  D    D        +  P H  +F   +K    S
Sbjct: 78  LLPREPYEASGRWEEYGDLLFRLK--DRKGADY-------LLGPTHEEIFTQVVKDQCTS 128

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
           Y++LPV L +  + YR+E +    G++R R F   D++ F T ++   E   +H
Sbjct: 129 YKDLPVMLYQVQTKYRDE-ARPRSGVLRGREFVMKDSYSFDTTDEGLAESYALH 181


>gi|332704074|ref|ZP_08424162.1| Prolyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay]
 gi|332554223|gb|EGJ51267.1| Prolyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay]
          Length = 576

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/161 (23%), Positives = 73/161 (45%), Gaps = 8/161 (4%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG+  +   G +    +   +R+++ +   +EI  P V    LW+++G W+ Y   +   
Sbjct: 37  SGIYTYLPMGLRALNKVADIVRQEMDRAGAQEILMPMVQPAELWKETGRWEFYGKELLRF 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           K   D+      + L P +      +    ++SYR+LP+ L +  + +R+E      GLM
Sbjct: 97  KDRKDS-----DYCLGPTHEEVVTNLVRGEVRSYRQLPLNLYQIQTKFRDEIRPRF-GLM 150

Query: 382 RVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFE 421
           R R F   DA+ F   E+  N+    ++     I++  G +
Sbjct: 151 RGREFVMKDAYSFDRDEEGANKSYWSMYQAYAQIFRRLGLK 191


>gi|325142550|gb|EGC64950.1| prolyl-tRNA synthetase [Neisseria meningitidis 961-5945]
 gi|325198486|gb|ADY93942.1| prolyl-tRNA synthetase [Neisseria meningitidis G2136]
          Length = 570

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 9/139 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I  + SG+  W   G ++ + + + +R ++ +    E+  P V    LWQ+SG W+ Y  
Sbjct: 32  IKANASGLYTWMPMGLRVLRKVENVVREEMARAGSVELLMPVVQPAELWQESGRWEFYGK 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVA-VFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            +  +K   D     R F + P  C   +A +    + SY++LP       + +R+E   
Sbjct: 92  ELLRLKDRHD-----RDFCMGP-TCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEVRP 145

Query: 376 SLHGLMRVRGFTQDDAHVF 394
              G+MR R F   DA+ F
Sbjct: 146 RF-GVMRAREFVMKDAYSF 163


>gi|260549963|ref|ZP_05824178.1| alanyl-tRNA synthetase [Acinetobacter sp. RUH2624]
 gi|260406955|gb|EEX00433.1| alanyl-tRNA synthetase [Acinetobacter sp. RUH2624]
          Length = 883

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 71/155 (45%), Gaps = 15/155 (9%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSS 116
           ++E I   D R      HS  H++  A++ I    VQ     +  D   +DF  +QP S 
Sbjct: 550 NVEAIVKADIREATARNHSATHLLHAALRQILGSHVQQKGSLVASDILRFDFANDQPVSF 609

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESK-KEAYKVEILESIPAKEN 170
           ++L Q+E+ +   I  ++P   + L  E A+      LF  K  +  +V  + S+  ++N
Sbjct: 610 EQLQQVERLVNAEIIANTPVTTELLDIEAAKAKGAMMLFGEKYGDEVRVLSMGSVIDEKN 669

Query: 171 VTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAG 205
            ++       +LC G HV+ TG +   FK+    G
Sbjct: 670 FSI-------ELCGGIHVKRTGDI-GLFKITSEGG 696


>gi|325144523|gb|EGC66822.1| prolyl-tRNA synthetase [Neisseria meningitidis M01-240013]
 gi|325208298|gb|ADZ03750.1| prolyl-tRNA synthetase [Neisseria meningitidis NZ-05/33]
          Length = 599

 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 9/139 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I  + SG+  W   G ++ + + + +R ++ +    E+  P V    LWQ+SG W+ Y  
Sbjct: 61  IKANASGLYTWMPMGLRVLRKVENVVREEMARAGSVELLMPVVQPAELWQESGRWEFYGK 120

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVA-VFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            +  +K   D     R F + P  C   +A +    + SY++LP       + +R+E   
Sbjct: 121 ELLRLKDRHD-----RDFCMGP-TCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEVRP 174

Query: 376 SLHGLMRVRGFTQDDAHVF 394
              G+MR R F   DA+ F
Sbjct: 175 RF-GVMRAREFVMKDAYSF 192


>gi|156937107|ref|YP_001434903.1| anticodon-binding domain-containing protein [Ignicoccus hospitalis
           KIN4/I]
 gi|156566091|gb|ABU81496.1| Anticodon-binding domain protein [Ignicoccus hospitalis KIN4/I]
          Length = 552

 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/130 (23%), Positives = 63/130 (48%), Gaps = 8/130 (6%)

Query: 523 IHRAVFGSIERFIGIMIENFKGNL--------PLWLSPIQAIVTTITSSAVEYAQEIANL 574
           +  A  GS ERF  ++ +    +L        P WLSPIQ  V   +   + YA  +A  
Sbjct: 396 VSAAPLGSFERFAYVIFDKAAKDLKSGETPELPAWLSPIQVRVIPKSRDVLPYALTVAEE 455

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           L+   + ++ D RN  ++ K+++   + +P +++   +E     + + R  +   + VSL
Sbjct: 456 LRERGIRVDVDDRNVPLSRKLKDAGEEWVPFLLLIDKREEKLGRVILMRRKTNDREDVSL 515

Query: 635 LDAIPILTKE 644
            + I ++++E
Sbjct: 516 EEVIRVVSEE 525


>gi|319638108|ref|ZP_07992872.1| prolyl-tRNA synthetase [Neisseria mucosa C102]
 gi|317400753|gb|EFV81410.1| prolyl-tRNA synthetase [Neisseria mucosa C102]
          Length = 570

 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 9/139 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I  + SG+  W   G ++ + + + +R ++ +    E+  P V    LWQ+SG W+ Y  
Sbjct: 32  IKANASGLYTWMPMGLRVLRKVENIVREEMARAGSVELLMPVVQPAELWQESGRWEFYGK 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVA-VFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            +  +K   D     R F + P  C   +A +    + SY++LP       + +R+E   
Sbjct: 92  ELLRLKDRHD-----RDFCMGP-TCEEVIADIVRKEVNSYKQLPKNFYHIQTKFRDEVRP 145

Query: 376 SLHGLMRVRGFTQDDAHVF 394
              G+MR R F   DA+ F
Sbjct: 146 RF-GVMRAREFVMKDAYSF 163


>gi|187777216|ref|ZP_02993689.1| hypothetical protein CLOSPO_00762 [Clostridium sporogenes ATCC
           15579]
 gi|187774144|gb|EDU37946.1| hypothetical protein CLOSPO_00762 [Clostridium sporogenes ATCC
           15579]
          Length = 555

 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 91/199 (45%), Gaps = 10/199 (5%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKV----CDLSDPVR-EGS 58
           ++KL  P+GS     +  +G  +   + +    ++    + GK+     +L+  V+ EG 
Sbjct: 6   ELKLYMPNGS----NILVSGDKILYDVVKENKLESNIPIVLGKIDEEYYELTSKVKKEGV 61

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
              +   D   +     +   I  +AV  ++PE  V I   +  G Y +  K    + ++
Sbjct: 62  FTPVDITDEMGVKTYVRTLQFIFIKAVLDLYPEATVIIEHSLGKGLYGEIHKNISLNEND 121

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           + +I+ KM EII++D    K  +  EKA E+F+      KV +L  IP +E V LY    
Sbjct: 122 ILKIKNKMNEIISKDIKIKKVSVKKEKAIEIFKEYGMKDKVRLLSHIPHEE-VKLYELDG 180

Query: 179 WFDLCRGPHVRSTGQVKKF 197
            +D   GP   STG +K F
Sbjct: 181 RYDYFYGPMAYSTGAIKNF 199


>gi|331000280|ref|ZP_08323964.1| proline--tRNA ligase [Parasutterella excrementihominis YIT 11859]
 gi|329572446|gb|EGG54099.1| proline--tRNA ligase [Parasutterella excrementihominis YIT 11859]
          Length = 582

 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 14/132 (10%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P V    LWQ++G W  Y + +   K   D     R F L+P +      +    +
Sbjct: 68  ELLMPIVQPAELWQETGRWQKYGSELLRFKDRHD-----RDFVLQPTSEEVVTDIARQEI 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF--------CTKEQMFNEC 404
           KS+R+LPV   +  + +R+E      G+MR R F   DA+ F         + ++MF   
Sbjct: 123 KSWRQLPVNFYQIQTKFRDERRPRF-GVMRGRDFVMKDAYSFDRTAEDAGKSYDKMFEAY 181

Query: 405 LKIHNLIISIYK 416
            +I + +  +Y+
Sbjct: 182 CRIFDRLGLVYR 193


>gi|121635048|ref|YP_975293.1| prolyl-tRNA synthetase [Neisseria meningitidis FAM18]
 gi|152112936|sp|A1KUG4|SYP_NEIMF RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|120866754|emb|CAM10507.1| prolyl-tRNA synthetase [Neisseria meningitidis FAM18]
 gi|325138239|gb|EGC60808.1| prolyl-tRNA synthetase [Neisseria meningitidis ES14902]
          Length = 570

 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 9/139 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I  + SG+  W   G ++ + + + +R ++ +    E+  P V    LWQ+SG W+ Y  
Sbjct: 32  IKANASGLYTWMPMGLRVLRKVENVVREEMARAGSVELLMPVVQPAELWQESGRWEFYGK 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVA-VFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            +  +K   D     R F + P  C   +A +    + SY++LP       + +R+E   
Sbjct: 92  ELLRLKDRHD-----RDFCMGP-TCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEVRP 145

Query: 376 SLHGLMRVRGFTQDDAHVF 394
              G+MR R F   DA+ F
Sbjct: 146 RF-GVMRAREFVMKDAYSF 163


>gi|116513081|ref|YP_811988.1| prolyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11]
 gi|123025108|sp|Q02VZ7|SYP_LACLS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|116108735|gb|ABJ73875.1| Prolyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11]
          Length = 616

 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/149 (20%), Positives = 72/149 (48%), Gaps = 7/149 (4%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
           ++ +  +G+  +     ++ + L + MR +  +    E+  P +L   LW++SG +++Y 
Sbjct: 31  YVRQVSAGIYAYLPLANRVLEKLKNIMREEFDEIGAVELLAPSLLTADLWRESGRYETYG 90

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            +++ +K  D +      F L P +     ++    + SY++LP+ + +  + +R+E   
Sbjct: 91  EDLYKLKNRDSS-----DFILGPTHEETMTSLVRDEITSYKKLPLNVYQIATKFRDEKR- 144

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +GL+R R F   D + +   +   +E 
Sbjct: 145 PRYGLLRGREFLMKDGYSYHADQDSLDET 173


>gi|68487989|ref|XP_712153.1| hypothetical protein CaO19.6701 [Candida albicans SC5314]
 gi|68488040|ref|XP_712128.1| hypothetical protein CaO19.13993 [Candida albicans SC5314]
 gi|77023056|ref|XP_888972.1| hypothetical protein CaO19_6701 [Candida albicans SC5314]
 gi|46433496|gb|EAK92934.1| hypothetical protein CaO19.13993 [Candida albicans SC5314]
 gi|46433523|gb|EAK92960.1| hypothetical protein CaO19.6701 [Candida albicans SC5314]
 gi|76573785|dbj|BAE44869.1| hypothetical protein [Candida albicans]
          Length = 691

 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 89/404 (22%), Positives = 156/404 (38%), Gaps = 63/404 (15%)

Query: 261 DGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH-LWQQSGHWDSYRANM 318
           D SG        + +++T+  +   +IK    +    P  + Q  L ++  H + +   +
Sbjct: 216 DVSGCYILRPNSYFVWETIQDWFNARIKKLGVQNTYFPMFVSQRVLEKEKDHIEGFAPEV 275

Query: 319 FAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLH 378
             V  A ++  D    A++P +       +   ++S+R+LP++L ++ SV R E      
Sbjct: 276 AWVTRAGNSELD-EHIAIRPTSETVMYPYYAKWIRSHRDLPLKLNQWNSVVRWEFKHP-Q 333

Query: 379 GLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGS 437
             +R R F   + H    TK+   NE L+I +    +Y++     ++    T  EK  G 
Sbjct: 334 PFLRTREFLWQEGHTAHLTKDAAANEVLQILDYYAGVYEELLAVPVVKGKKTENEKFAGG 393

Query: 438 DALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI- 496
           D                                    Y    E  +  A GR  Q GT  
Sbjct: 394 D------------------------------------YTTTVEGFIA-ATGRGIQGGTSH 416

Query: 497 QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP---- 552
            +  N    FN    N    +   +  ++  +G   R IG+MI     N  L L P    
Sbjct: 417 HLGTNFSKMFNISVENPEGSEKPRIFAYQNSWGLSTRVIGVMIMTHSDNKGLVLPPRIAQ 476

Query: 553 IQAIVTTI--TSSAV--------EYAQEIANLLKSHHLSIETDFRNETIN--YKIREHSI 600
            QA+V  +  TS +         E A++I   L+++ + +  D+R E  N  +K  +  +
Sbjct: 477 YQAVVIPVGLTSKSTDAQRKEINEGAEKIEQSLRANGIRVTGDYR-EIYNPGWKFADWEL 535

Query: 601 KKIPIIIICGDKEASERSIGI--RRFGSTTTQKVSLLDA-IPIL 641
           K +P+    G K+ +   + I  R  G   T K+  LD  +P L
Sbjct: 536 KGVPLRFEFGPKDLAGNQVTIVRRNDGKKYTVKLDELDTEVPKL 579


>gi|253995828|ref|YP_003047892.1| prolyl-tRNA synthetase [Methylotenera mobilis JLW8]
 gi|253982507|gb|ACT47365.1| prolyl-tRNA synthetase [Methylotenera mobilis JLW8]
          Length = 573

 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/210 (21%), Positives = 93/210 (44%), Gaps = 23/210 (10%)

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR 284
           +NTQ+E         E+E + H  + R   +  +   GSG+  W   G ++ + +   +R
Sbjct: 8   FNTQKEAPN------EAELQSHILMVRAGLIKRL---GSGLYSWMPLGLRVLRKVERVVR 58

Query: 285 RKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPG 343
            ++ +    E+  P V  + LW+++G W  +   M  ++   +     R F   P +   
Sbjct: 59  EEMNNAGALELLMPAVQPKELWEETGRWAVFGPQMLKIQDRHE-----REFCFGPTHEEV 113

Query: 344 HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK----EQ 399
              +    ++SY++LP+   +  + +R+E      G+MR R F   DA+ F T     EQ
Sbjct: 114 ITDIARKEIRSYKQLPLNFYQIQTKFRDEIRPRF-GVMRAREFMMKDAYSFHTDFASLEQ 172

Query: 400 MFNECLKIHNLIISIYKDFGFEKIMVKLST 429
            ++   + ++   +++   G +   VK  T
Sbjct: 173 TYDTMYQAYS---NVFTRLGLKFRAVKADT 199


>gi|288575624|ref|ZP_05977335.2| proline--tRNA ligase [Neisseria mucosa ATCC 25996]
 gi|288567367|gb|EFC88927.1| proline--tRNA ligase [Neisseria mucosa ATCC 25996]
          Length = 581

 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 9/139 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I  + SG+  W   G ++ + + + +R ++ +    E+  P V    LWQ+SG W+ Y  
Sbjct: 43  IKANASGLYTWMPMGLRVLRKVENVVREEMARAGSVELLMPVVQPAELWQESGRWEFYGK 102

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVA-VFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            +  +K   D     R F + P  C   +A +    + SY++LP       + +R+E   
Sbjct: 103 ELLRLKDRHD-----RDFCMGP-TCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEVRP 156

Query: 376 SLHGLMRVRGFTQDDAHVF 394
              G+MR R F   DA+ F
Sbjct: 157 RF-GVMRAREFVMKDAYSF 174


>gi|127513524|ref|YP_001094721.1| prolyl-tRNA synthetase [Shewanella loihica PV-4]
 gi|166980157|sp|A3QG64|SYP_SHELP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|126638819|gb|ABO24462.1| prolyl-tRNA synthetase [Shewanella loihica PV-4]
          Length = 569

 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/150 (22%), Positives = 68/150 (45%), Gaps = 7/150 (4%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I  + SG+  W   G ++ + + + +R ++ +    EI  P V    LW ++G WD +  
Sbjct: 32  IRRNASGLYSWLPSGLRVLRKVEAIVREEMNNAGAVEILMPMVQPADLWVETGRWDKFGP 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            +   +   +     R F L P +      +    + SY++LP+ L +  + +R+E    
Sbjct: 92  ELLRFQDRHN-----RDFVLGPTHEEVITDIIRKEVSSYKQLPLNLYQIQTKFRDEVRPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
             G+MR R F   DA+ F   ++  ++  +
Sbjct: 147 F-GVMRSREFLMKDAYSFHLDQETMDDTYQ 175


>gi|294654601|ref|XP_456661.2| DEHA2A07678p [Debaryomyces hansenii CBS767]
 gi|199429004|emb|CAG84617.2| DEHA2A07678p [Debaryomyces hansenii]
          Length = 576

 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 72/154 (46%), Gaps = 14/154 (9%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK 322
           G++ W   G  I Q +   + R++++ + EEIN   +    LWQ++G WD+  + +F +K
Sbjct: 58  GLVHWLPVGLAISQNVSRVIHRRMRECNAEEINLSLLSSSQLWQETGRWDN--SELFKLK 115

Query: 323 CADDTIKDLRTFALKPMNCPGHVA-VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
             D +  D    A     C   +  +    L SY+ LP+   +    +R+E      GL+
Sbjct: 116 --DSSKNDFCLVA----TCEEEITKLIGANLNSYKNLPLLYYQINEKFRDEKRPR-SGLL 168

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           R R F   DA+ F   E+     +K +N ++  Y
Sbjct: 169 RGREFLMKDAYSFDLNEEA---AMKTYNKVVDAY 199


>gi|88705599|ref|ZP_01103309.1| prolyl-tRNA synthetase [Congregibacter litoralis KT71]
 gi|88700112|gb|EAQ97221.1| prolyl-tRNA synthetase [Congregibacter litoralis KT71]
          Length = 571

 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/161 (22%), Positives = 68/161 (42%), Gaps = 8/161 (4%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG+  W   G ++ + +   +R ++      E+  P V    LW++SG W+ Y   +  +
Sbjct: 37  SGLYTWMPMGLRVLRKVERVVREEMDASGALELAMPMVQPAELWEESGRWEQYGPELLRI 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           +      +  R F L P +      +  + + SY++LP+ L +  +  R+E      G+M
Sbjct: 97  QD-----RHQRDFCLGPTHEEVITDIVRNEISSYKQLPLNLYQIQNKVRDEIRPRF-GVM 150

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLKI-HNLIISIYKDFGFE 421
           R R F   DA+ F            + H     I++  G +
Sbjct: 151 RAREFLMKDAYSFHADATSLEATYGVMHGAYTRIFERLGLD 191


>gi|313204643|ref|YP_004043300.1| ATPase AAA [Paludibacter propionicigenes WB4]
 gi|312443959|gb|ADQ80315.1| AAA ATPase [Paludibacter propionicigenes WB4]
          Length = 556

 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/182 (21%), Positives = 87/182 (47%), Gaps = 4/182 (2%)

Query: 13  SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLA 71
           S  N+P+  +  ++ + +   L    +A  +N KV DL+  V +   IE I    P  + 
Sbjct: 14  SYHNYPLGTSLIEIYQDLKIELKYPVMAARVNYKVEDLNFLVYKPKDIEFIDLSTPSGMR 73

Query: 72  VIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQIEKKMQEII 130
           V   +   ++++A+  ++P V + I   I  G+Y   +   +P +   +A+I++++ E I
Sbjct: 74  VYVRTLCMVLSKAISELYPHVTLQIEHPISKGYYCKLENLNEPITPQIIAKIKERVNETI 133

Query: 131 ARDSPFLKQYLSHEKARELFESKK-EAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
           A+    + +    ++ +ELF +K  ++ K  + E++        +R  ++ D   G  + 
Sbjct: 134 AQGKRIICEEKQTKEVKELFVNKNLQSDKTALFETL-GNPYFRFFRIDDYIDYYNGVLLP 192

Query: 190 ST 191
           ST
Sbjct: 193 ST 194


>gi|309809554|ref|ZP_07703412.1| proline--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
 gi|308170226|gb|EFO72261.1| proline--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
          Length = 483

 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 60/120 (50%), Gaps = 12/120 (10%)

Query: 287 IKDDYEEINTPQVLDQH-----LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           I+++ E IN P+++  H     LW++SG    Y   MF +K      +  R   L P + 
Sbjct: 57  IEEEMENINVPEMIMPHFLPATLWEESGRLPKYGPEMFRLKD-----RHGRESLLGPTHE 111

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQM 400
                +    +KSY+++P+ L +  + +R+E +    GL+R R F   D + F  T+EQ+
Sbjct: 112 ETFTEIIGKNIKSYKQMPIALYQIQTKFRDE-NRPRFGLLRGREFVMLDGYSFAATREQL 170


>gi|255065704|ref|ZP_05317559.1| proline--tRNA ligase [Neisseria sicca ATCC 29256]
 gi|255050022|gb|EET45486.1| proline--tRNA ligase [Neisseria sicca ATCC 29256]
          Length = 570

 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 9/139 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I  + SG+  W   G ++ + + + +R ++ +    E+  P V    LWQ+SG W+ Y  
Sbjct: 32  IKANASGLYTWMPMGLRVLRKVENVVREEMARAGSVELLMPVVQPAELWQESGRWEFYGK 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVA-VFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            +  +K   D     R F + P  C   +A +    + SY++LP       + +R+E   
Sbjct: 92  ELLRLKDRHD-----RDFCMGP-TCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEVRP 145

Query: 376 SLHGLMRVRGFTQDDAHVF 394
              G+MR R F   DA+ F
Sbjct: 146 RF-GVMRAREFVMKDAYSF 163


>gi|170064309|ref|XP_001867472.1| mitochondrial 39S ribosomal protein L39 [Culex quinquefasciatus]
 gi|167881734|gb|EDS45117.1| mitochondrial 39S ribosomal protein L39 [Culex quinquefasciatus]
          Length = 331

 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 88/183 (48%), Gaps = 20/183 (10%)

Query: 76  SCAHIMAEAVQSIW-PEVQVAI----GPIIEDG-FYYDFDKEQPF---SSDELAQIEKKM 126
           +C+ ++  A+Q  + PE  + +     P I+ G F +D    +     +  EL  +  +M
Sbjct: 135 TCSFLLGAALQKAFKPEAGLFLHSFPKPSIKSGSFVHDIALAREGWTPTVHELRALSIEM 194

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN--VTLYRQGEWFDLCR 184
            ++  +D P  +  +S E A+E+F      YK E + SI A+ N  VT+YR GE  D+ +
Sbjct: 195 IKLSQQDQPIERLDVSSELAQEMFADN--PYKREQVPSISAQNNGQVTVYRVGEHVDISK 252

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYW--RGDSNRPMLSRIYGTAWNTQQELTQYLY-FLEES 241
           GP + STG + K      VA  +   R  +++  L R+ G A      L  + Y  LE+ 
Sbjct: 253 GPMISSTGLLGK----CTVAAVHQVPRNSADKLSLYRVQGVALPVGLNLNHFAYGILEDR 308

Query: 242 EKR 244
            K+
Sbjct: 309 AKK 311


>gi|330994071|ref|ZP_08318001.1| Prolyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1]
 gi|329759017|gb|EGG75531.1| Prolyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1]
          Length = 440

 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 88/438 (20%), Positives = 165/438 (37%), Gaps = 51/438 (11%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E++   HR + R      I +  +G+  W   G ++ + + + +R +      +E+  P 
Sbjct: 17  EAQITSHRLMLRAG---MIRQTAAGIYAWLPTGLRVLRNIANIVRAEQDAIGAQELLMPT 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW++SG +D+Y   M  ++   +     R     P N      +F   +KSY+EL
Sbjct: 74  MQSAELWKRSGRYDAYGPEMLRIQDRHE-----RDMLFGPTNEEMVTDLFGQAIKSYKEL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL-IISIYKD 417
           P  L +    +R+E      G+MR R F   DA+ F        +  +   L  +  ++ 
Sbjct: 129 PQVLYQIQWKFRDEVRPRF-GVMRGREFYMKDAYSFDLDHAAAVDTYRRMMLSYLRTFQR 187

Query: 418 FGFEKIMVKLSTRPEKRVG---------------SDALWDDAENIMKGVLDTIKNSSQDR 462
            G   I ++  T P   +G               S   +D A      V +TI  + +D 
Sbjct: 188 LGVRAIPMRADTGP---IGGELSHEFLILAPTGESGVFFDSALEEQDWVGETIDVNDRDA 244

Query: 463 INTGVLLGEGAFYGPKFEYILKDAI----------GRDWQCGTIQVDFNLPSRFN-AFYV 511
           +         +FY    E   + A           GR  + G I   FN   ++  +  +
Sbjct: 245 LGA-FFTSLTSFYAATDEMHDEAAWAKVPAERRREGRGIEVGHI---FNFGRKYTQSMDI 300

Query: 512 NSHSEKCHPVMIHRAVFG-SIERFIGIMIE-NFKGNLPLW---LSPIQAIVTTITSSAVE 566
                   P+      +G  + R +  +IE +   N  +W   ++P +A++  + +   +
Sbjct: 301 AVSGPDGAPLHPEMGSYGIGVSRLVAAIIEASHDENGIIWPESVAPFRAVIINLKNGDAQ 360

Query: 567 YAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI--RRF 624
                  L  +    +  D R E    K  +  +   P  +I G + A E  + +  RR 
Sbjct: 361 CDAICEKLYAAAPDDLLYDDRAERAGAKFADADLLGHPWQLIVGPRGAKEGKVEVKNRRT 420

Query: 625 GSTTTQKVSLLDAIPILT 642
           G  T + V    A+ + T
Sbjct: 421 GERTEETVDAALALIMKT 438


>gi|56963999|ref|YP_175730.1| prolyl-tRNA synthetase [Bacillus clausii KSM-K16]
 gi|81822102|sp|Q5WFT6|SYP_BACSK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|56910242|dbj|BAD64769.1| proline-tRNA synthetase [Bacillus clausii KSM-K16]
          Length = 566

 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/131 (25%), Positives = 61/131 (46%), Gaps = 7/131 (5%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           +E+  P +    LWQ SG W++    +  +K   +     R FAL P +     ++   G
Sbjct: 67  QELTLPSLHPAELWQASGRWEAMGDELVRLKDRHN-----RDFALGPTHEEVITSLIKDG 121

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNL 410
           + SY++LP+ + +  + +R+E      GL+R R F   DA+ F    +  +E   ++H  
Sbjct: 122 IASYKKLPLCVYQVQTKFRDERRPRF-GLLRGREFIMKDAYSFHDSPESLDEAYWQMHGA 180

Query: 411 IISIYKDFGFE 421
              I+   G E
Sbjct: 181 YSRIFTRVGLE 191


>gi|119383350|ref|YP_914406.1| alanyl-tRNA synthetase [Paracoccus denitrificans PD1222]
 gi|205830170|sp|A1AZL6|SYA_PARDP RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|119373117|gb|ABL68710.1| alanyl-tRNA synthetase [Paracoccus denitrificans PD1222]
          Length = 885

 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 75/178 (42%), Gaps = 8/178 (4%)

Query: 36  KKAVAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVA 95
           KK   V I+     L    R    ++    D RS     HS  H++ EA++    E    
Sbjct: 524 KKTGGVFIHIAEVTLGTIQRGQGAQLSVDHDRRSAIRANHSATHLLHEALRRALGEHVAQ 583

Query: 96  IGPI-IEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKAREL----- 149
            G +   D   +DF   +  + +ELAQ+E+++ + I ++SP   + ++ + AR L     
Sbjct: 584 RGSLNAPDRLRFDFSHAKAMTPEELAQVEREVNDFIRQNSPVETRIMTPDDARALGAQAL 643

Query: 150 -FESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGA 206
             E   +  +V  +  +P     T   Q    +LC G HV  TG +  F    + A A
Sbjct: 644 FGEKYGDEVRVVSMGELPGSGKGT-GGQTYSLELCGGTHVARTGDIGMFALTSETASA 700


>gi|330896119|gb|EGH28340.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 571

 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 62/128 (48%), Gaps = 7/128 (5%)

Query: 268 WHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADD 326
           W  +G ++ + + + +R ++      EI  P +    LWQ+SG W+ Y   +  ++  D 
Sbjct: 42  WLPRGLRVLRKVEAIVREEMDAAGALEILMPGIQPAELWQESGRWEQYGPEL--MRLVD- 98

Query: 327 TIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
             +  R F L P +      +  + L SY++LP+ L +  + +R+E      GLMR R F
Sbjct: 99  --RHNREFCLGPTHEEVITDLARNELNSYKQLPINLYQIQTKFRDEIRPRF-GLMRGREF 155

Query: 387 TQDDAHVF 394
              DA+ F
Sbjct: 156 VMKDAYSF 163


>gi|283955931|ref|ZP_06373421.1| alanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336]
 gi|283792591|gb|EFC31370.1| alanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336]
          Length = 842

 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 61/130 (46%), Gaps = 19/130 (14%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++  A++ I        G ++E +   +DF   +  S +EL  IEK++ E+I   
Sbjct: 549 HSATHLLHHALREILGSHVSQAGSLVESNKLRFDFTHHKALSKEELESIEKRVNEMIINS 608

Query: 134 SPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           S  + + +  E+A++     LF  K +              NV +   GE  +LC G HV
Sbjct: 609 SEAILENMPLEEAKKSGAIALFNEKYQG-------------NVRVLTLGESKELCGGTHV 655

Query: 189 RSTGQVKKFF 198
           ++T Q+  F+
Sbjct: 656 KNTAQIGSFY 665


>gi|218885980|ref|YP_002435301.1| alanyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|218756934|gb|ACL07833.1| alanyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 879

 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/145 (24%), Positives = 67/145 (46%), Gaps = 12/145 (8%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSD 117
           + +   ED R  +   H+C H++  A++ +  + V+ A   +  D   +DF      + +
Sbjct: 554 VHLQVEEDERVASARNHTCTHLLHAALRRVLGDHVKQAGSLVAPDRLRFDFTHIAAMTPE 613

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKA--RELFESKKEAYKVEILESIPAKENVTLYR 175
           E+A +E+++  +I  + P    +++++ A  R       E Y  E+     A E+V    
Sbjct: 614 EIAAVEREVNRVILANLPLETDHMAYDAALTRGAMALFGEKYGDEVRVVAIADESV---- 669

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKL 200
                +LC G H+R+TGQ   F  L
Sbjct: 670 -----ELCGGTHLRATGQAGLFLIL 689


>gi|58038568|ref|YP_190532.1| prolyl-tRNA synthetase [Gluconobacter oxydans 621H]
 gi|81819190|sp|Q5FUU9|SYP_GLUOX RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|58000982|gb|AAW59876.1| Prolyl-tRNA synthetase [Gluconobacter oxydans 621H]
          Length = 438

 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/183 (24%), Positives = 79/183 (43%), Gaps = 11/183 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRA 316
           + +  SG+  W   G ++ + +   +R +      +E+  P +    LW++SG +D+Y  
Sbjct: 32  VRQTASGIYAWLPAGLRVLRNIEQIIREEQDAIGAQEVLMPTLQSAELWRRSGRYDAYGP 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  ++  D   +DL      P N      +F   +KSY+ELP  L      +R+E    
Sbjct: 92  EMLRIQ--DRHGRDL---LYGPTNEEMITDIFGSSVKSYKELPKALYHIQWKFRDEVRPR 146

Query: 377 LHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
             G+MR R F   DA+ F  + E       ++    + I++  G   + +   T P   +
Sbjct: 147 F-GVMRGREFLMKDAYSFDASYEGAVASYRRMMLSYLRIFQRLGVRAVPMVADTGP---I 202

Query: 436 GSD 438
           G D
Sbjct: 203 GGD 205


>gi|220931918|ref|YP_002508826.1| uridine kinase [Halothermothrix orenii H 168]
 gi|219993228|gb|ACL69831.1| uridine kinase [Halothermothrix orenii H 168]
          Length = 549

 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/185 (20%), Positives = 88/185 (47%), Gaps = 2/185 (1%)

Query: 22  TGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSCAHI 80
           T  +V +       ++ V   +N +V  L+  +   S +  +T  D     + R S   +
Sbjct: 18  TVEEVVKETYNGNYREVVGAIVNNEVESLNYKLNNRSQVSFLTINDESGNRIYRRSLFFL 77

Query: 81  MAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQY 140
           +   +  ++P  +++I   + +G Y + +K  P +  +L +I+K+M+E++ +D P  K  
Sbjct: 78  LTRVIYYLYPGAKLSIEHSLGNGIYCELNKNTPITQSDLIKIKKRMEELVRKDLPINKIK 137

Query: 141 LSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKL 200
           ++ +K  +++  +    KV++++ +   +   +Y    +++      V STG + KF   
Sbjct: 138 VNKDKLEKIYTEQDFYDKVKLVKQLDISQ-WPVYELDGFYNYFYSILVPSTGYLDKFDIH 196

Query: 201 MKVAG 205
            K+ G
Sbjct: 197 FKMPG 201


>gi|325205891|gb|ADZ01344.1| prolyl-tRNA synthetase [Neisseria meningitidis M04-240196]
          Length = 570

 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 9/139 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I  + SG+  W   G ++ + + + +R ++ +    E+  P V    LWQ+SG W+ Y  
Sbjct: 32  IKANASGLYTWMPMGLRVLRKVENVVREEMARAGSVELLMPVVQPAELWQESGRWEFYGK 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVA-VFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            +  +K   D     R F + P  C   +A +    + SY++LP       + +R+E   
Sbjct: 92  ELLRLKDRHD-----RDFCMGP-TCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEVRP 145

Query: 376 SLHGLMRVRGFTQDDAHVF 394
              G+MR R F   DA+ F
Sbjct: 146 RF-GVMRAREFVMKDAYSF 163


>gi|283954216|ref|ZP_06371740.1| alanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414]
 gi|283794234|gb|EFC32979.1| alanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414]
          Length = 842

 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 61/130 (46%), Gaps = 19/130 (14%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++  A++ I        G ++E +   +DF   +  S +EL  IEK++ E+I   
Sbjct: 549 HSATHLLHHALREILGSHVSQAGSLVESNKLRFDFTHHKALSKEELESIEKRVNEMIINS 608

Query: 134 SPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           S  + + +  E+A++     LF  K +              NV +   GE  +LC G HV
Sbjct: 609 SEAILENMPLEEAKKSGAIALFNEKYQG-------------NVRVLTLGESKELCGGTHV 655

Query: 189 RSTGQVKKFF 198
           ++T Q+  F+
Sbjct: 656 KNTAQIGSFY 665


>gi|153006742|ref|YP_001381067.1| alanyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
 gi|205829977|sp|A7HH87|SYA_ANADF RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|152030315|gb|ABS28083.1| alanyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
          Length = 904

 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 68/147 (46%), Gaps = 18/147 (12%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAV-QSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSD 117
           +E+   +  R L    HS  H++  A+ +++   V+ A   +  D   +DF   QP S +
Sbjct: 578 VELAVDDRRRDLIRANHSATHLLQLALRETLGDHVKQAGSIVAPDYLRFDFSHFQPLSEE 637

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARE----LFESKKEAYKVEILESIPAKENVTL 173
           EL  IE+++ E++  ++      L  E AR+    +   +K    V ++   P+KE    
Sbjct: 638 ELNAIERRVNELVRENAETETAVLKLEDARQSGAMMIFGEKYGDVVRVVRLGPSKE---- 693

Query: 174 YRQGEWFDLCRGPHVRSTGQVKKFFKL 200
                   LC G HVR TG +  FFK+
Sbjct: 694 --------LCGGTHVRRTGDI-AFFKI 711


>gi|71083600|ref|YP_266319.1| prolyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1062]
 gi|114152227|sp|Q4FM73|SYP_PELUB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|71062713|gb|AAZ21716.1| proline-tRNA ligase [Candidatus Pelagibacter ubique HTCC1062]
          Length = 444

 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/161 (24%), Positives = 72/161 (44%), Gaps = 10/161 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E++ + H+ + R   +  I +  +G+  W   G+K+ + +   +R  + K   +EI  P 
Sbjct: 17  EAKIKSHQLMLR---VGMIKQSSAGIYSWLPLGFKVMKKIEQIVREEQNKIGAQEILMPT 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    +W++SG +D Y   M  +K      +  R     P N      +F   +KSY+ L
Sbjct: 74  IQPSDIWKESGRYDDYGDEMLRIKD-----RQGREMLYGPTNEELVTDIFRSSVKSYKSL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQ 399
           P  L      +R+E      G+MR R F   DA+ F   ++
Sbjct: 129 PQLLYHIQWKFRDEVRPRF-GIMRGREFYMKDAYSFDVNDE 168


>gi|56475942|ref|YP_157531.1| prolyl-tRNA synthetase [Aromatoleum aromaticum EbN1]
 gi|81821206|sp|Q5P7T1|SYP_AZOSE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|56311985|emb|CAI06630.1| prolyl-tRNA synthetase [Aromatoleum aromaticum EbN1]
          Length = 583

 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P V    LW ++G W+   A M   K      +  R FAL+P +      +    L
Sbjct: 68  ELTMPLVQPAELWDETGRWEQMGAEMLRFKD-----RHQRDFALQPTSEEVVTDIARQEL 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSYR+LP    +  + +R+E      G+MR R FT  DA+ F
Sbjct: 123 KSYRQLPKNFYQIQTKFRDERRPRF-GVMRGREFTMKDAYSF 163


>gi|86151665|ref|ZP_01069879.1| alanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 260.94]
 gi|315124034|ref|YP_004066038.1| alanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|85841294|gb|EAQ58542.1| alanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 260.94]
 gi|315017756|gb|ADT65849.1| alanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
          Length = 842

 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 61/130 (46%), Gaps = 19/130 (14%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++  A++ I        G ++E +   +DF   +  S +EL  IEK++ E+I   
Sbjct: 549 HSATHLLHHALREILGSHVSQAGSLVESNKLRFDFTHHKALSKEELESIEKRVNEMIINS 608

Query: 134 SPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           S  + + +  E+A++     LF  K +              NV +   GE  +LC G HV
Sbjct: 609 SEAILENMPLEEAKKSGAIALFNEKYQG-------------NVRVLTLGESKELCGGTHV 655

Query: 189 RSTGQVKKFF 198
           ++T Q+  F+
Sbjct: 656 KNTAQIGSFY 665


>gi|86153544|ref|ZP_01071748.1| alanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni HB93-13]
 gi|85843270|gb|EAQ60481.1| alanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni HB93-13]
          Length = 842

 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 61/130 (46%), Gaps = 19/130 (14%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++  A++ I        G ++E +   +DF   +  S +EL  IEK++ E+I   
Sbjct: 549 HSATHLLHHALREILGSHVSQAGSLVESNKLRFDFTHHKALSKEELESIEKRVNEMIINS 608

Query: 134 SPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           S  + + +  E+A++     LF  K +              NV +   GE  +LC G HV
Sbjct: 609 SEAILENMPLEEAKKSGAIALFNEKYQG-------------NVRVLTLGESKELCGGTHV 655

Query: 189 RSTGQVKKFF 198
           ++T Q+  F+
Sbjct: 656 KNTAQIGSFY 665


>gi|196034766|ref|ZP_03102174.1| prolyl-tRNA synthetase [Bacillus cereus W]
 gi|195992809|gb|EDX56769.1| prolyl-tRNA synthetase [Bacillus cereus W]
          Length = 476

 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 83/400 (20%), Positives = 154/400 (38%), Gaps = 69/400 (17%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAV 321
           G +     G+ +++ +   M  K+K   +E +  P  + + L Q +  H + +   +  V
Sbjct: 37  GCMILRPYGYALWENMQKVMDEKLKATGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWV 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
               D  K      ++P +       F+  ++SY +LP    ++ SV R E +      +
Sbjct: 97  THGGDE-KLAERLCIRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKT--TRPFL 153

Query: 382 RVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           R   F   + H +  T E+   E L I NL  S  +D+    ++    T  EK  G+ A 
Sbjct: 154 RTTEFLWQEGHTIHETAEESQAETLNILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKAT 213

Query: 441 WDDAENIMKGVLDTIKNSSQD--RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
           +            TI++   D   + TG     G  +   F+    D  G+ WQ      
Sbjct: 214 Y------------TIESLMHDGKALQTGTSHNFGTNFSEAFDIKFLDRTGK-WQ------ 254

Query: 499 DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQ 554
                                   +H+  +G   R IG +I     N    +P  ++P+Q
Sbjct: 255 -----------------------YVHQTSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQ 291

Query: 555 AIVTTIT-------SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIII 607
            ++  I        + A+E    I  + +     ++ D  N+T  +K  E+ +K IPI +
Sbjct: 292 VVIVPIAQHKEGVLAKAIELQGHIQKVAR-----VKIDASNKTPGWKFNEYEMKGIPIRL 346

Query: 608 ICGDKEASERSIGIRRFGSTTTQKVS---LLDAIPILTKE 644
             G K+  +  + + R  +   + +S   L + IP L +E
Sbjct: 347 EVGPKDIEKNQVVLVRRDTKEKEFISMDQLGERIPALLEE 386


>gi|323144099|ref|ZP_08078739.1| proline--tRNA ligase [Succinatimonas hippei YIT 12066]
 gi|322416114|gb|EFY06808.1| proline--tRNA ligase [Succinatimonas hippei YIT 12066]
          Length = 593

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 71/150 (47%), Gaps = 10/150 (6%)

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHL 304
           HR + R   +  IA   SG+  W   G ++ Q +   +R ++ +    E+  P V    L
Sbjct: 44  HRLMLRAGLIRQIA---SGIYVWLPTGMRVLQKVEKIIREELNRAGAIELFMPFVQPADL 100

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SG ++ Y   +  +K   D  K+   F L P +     A+    +KS R+LP+ L +
Sbjct: 101 WKESGRYEKYGPELCRLK---DRKKN--EFVLGPTHEEVITAIARREIKSARQLPINLYQ 155

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
             + +R+E      G+MR R F   DA+ F
Sbjct: 156 IQTKFRDEIRPRF-GVMRGREFIMKDAYSF 184


>gi|125625170|ref|YP_001033653.1| prolyl-tRNA synthetase [Lactococcus lactis subsp. cremoris MG1363]
 gi|152112925|sp|A2RNT2|SYP_LACLM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|124493978|emb|CAL98976.1| ProS protein [Lactococcus lactis subsp. cremoris MG1363]
 gi|300071979|gb|ADJ61379.1| prolyl-tRNA synthetase [Lactococcus lactis subsp. cremoris NZ9000]
          Length = 616

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/149 (20%), Positives = 72/149 (48%), Gaps = 7/149 (4%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
           ++ +  +G+  +     ++ + L + MR +  +    E+  P +L   LW++SG +++Y 
Sbjct: 31  YVRQVSAGIYAYLPLANRVLEKLKNIMREEFDEIGAVELLAPSLLTADLWRESGRYETYG 90

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            +++ +K  D +      F L P +     ++    + SY++LP+ + +  + +R+E   
Sbjct: 91  EDLYKLKNRDSS-----DFILGPTHEETMTSLVRDEITSYKKLPLNVYQIATKFRDEKR- 144

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +GL+R R F   D + +   +   +E 
Sbjct: 145 PRYGLLRGREFLMKDGYSYHADQDSLDET 173


>gi|283769476|ref|ZP_06342372.1| proline--tRNA ligase [Bulleidia extructa W1219]
 gi|283103744|gb|EFC05130.1| proline--tRNA ligase [Bulleidia extructa W1219]
          Length = 561

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/174 (21%), Positives = 83/174 (47%), Gaps = 8/174 (4%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDY-EEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  +GV      G K+F  + S ++ +++  + +E+  P ++ + ++  SG  + + +
Sbjct: 32  IKKSSTGVYMILPMGLKVFNKIKSIIQEEMEAIHCQELLMPSLIPEEVYVASGRREGFGS 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
           +MF++K   +     + + L P +           ++SY+++P  + +  + +R+EP   
Sbjct: 92  DMFSLKDRKN-----QNYVLGPTHEELFATAAKLKIRSYKDMPFSIYQIQTKFRDEPR-P 145

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFEKIMVKLST 429
            +GL+RVR F   DA+ F   E   +    K      +I+   G   ++VK  T
Sbjct: 146 RYGLIRVREFQMKDAYSFDANEAGMDSSYNKQFQAYKNIFDRLGLNYVVVKADT 199


>gi|262277283|ref|ZP_06055076.1| prolyl-tRNA synthetase [alpha proteobacterium HIMB114]
 gi|262224386|gb|EEY74845.1| prolyl-tRNA synthetase [alpha proteobacterium HIMB114]
          Length = 442

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 81/190 (42%), Gaps = 25/190 (13%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  SG+  W   G+K+ + +   +R  + K    E+  P +    +W++SG +D Y  
Sbjct: 32  IRQSASGIYSWLPMGFKVLKNIEQIVREEQNKAGAIELLMPTIQSADIWKESGRYDDYGK 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  ++ +D   +DL      P N      +F   +KSY+ LP+ L      +R+E    
Sbjct: 92  EM--LRISDRHERDL---LYGPTNEELITQIFRDNIKSYKNLPLMLYHIQWKFRDEIRPR 146

Query: 377 LHGLMRVRGFTQDDAHVF----CTKE----QMFNECLKIHNLIISIYKDFGFEKIMVKLS 428
             G+MR R F   D + F     T E    +MF   LK        ++ F    I +K  
Sbjct: 147 F-GVMRCREFLMKDTYSFDVDKATAEFSYKKMFLSYLK-------TFQKFELNAIPMKAE 198

Query: 429 TRPEKRVGSD 438
           T P   +G D
Sbjct: 199 TGP---IGGD 205


>gi|15605873|ref|NP_213250.1| prolyl-tRNA synthetase [Aquifex aeolicus VF5]
 gi|81816424|sp|O66690|SYP_AQUAE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|2983039|gb|AAC06648.1| proline-tRNA synthetase [Aquifex aeolicus VF5]
          Length = 570

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 65/126 (51%), Gaps = 7/126 (5%)

Query: 272 GWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            +K+ + + S +R+++ +   +E+    +  + LW+++G W++Y   +F +K      ++
Sbjct: 46  AYKVLKKVESIIRKEMDRSGAQELLLTVLNPKELWEETGRWETYGEELFKLKD-----RN 100

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
            R + L P +      +    ++SYR+LPV L +    +R+E      GL+R R F   D
Sbjct: 101 GREYCLGPTHEEEITDLVRRVVRSYRQLPVILYQIQVKFRDEKRPRF-GLIRAREFIMKD 159

Query: 391 AHVFCT 396
           A+ F T
Sbjct: 160 AYSFDT 165


>gi|295836236|ref|ZP_06823169.1| proline-tRNA ligase [Streptomyces sp. SPB74]
 gi|295825921|gb|EFG64555.1| proline-tRNA ligase [Streptomyces sp. SPB74]
          Length = 563

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 79/174 (45%), Gaps = 18/174 (10%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R     ++    +GV  W   G K+   +   +R ++     +E+  P 
Sbjct: 21  DAETLSHKLLVRA---GYVRRTAAGVWSWLPLGKKVLDNISQIVREELDAIGAQEVLLPA 77

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L +  ++ +G W+ Y   +F +K  D    D        +  P H  +F   +K    S
Sbjct: 78  LLPREPYEATGRWEEYGDLLFRLK--DRKGADY-------LLGPTHEEIFTQVVKDQCTS 128

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
           Y++LPV L +  + YR+E +    G++R R F   D++ F T ++   E   +H
Sbjct: 129 YKDLPVMLYQIQTKYRDE-ARPRSGVLRGREFLMKDSYSFDTTDEGLAESYALH 181


>gi|118602380|ref|YP_903595.1| prolyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|152016598|sp|A1AW17|SYP_RUTMC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|118567319|gb|ABL02124.1| prolyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
          Length = 559

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 66/142 (46%), Gaps = 15/142 (10%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I++  SG+  +   G ++   + + +R+++ K   +E+  P V    LW+ SG WD Y  
Sbjct: 32  ISKLASGLYSYLPMGVRVLHKVENIIRQEMNKSGAQEVFMPVVQPAELWKTSGRWDKYGT 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH----GLKSYRELPVRLAEFGSVYRNE 372
            +        T +  R F L P     H  V  H     L+SY++LP+   +  + +R+E
Sbjct: 92  ELLRF-----TDRHQREFCLGPT----HEEVITHLAAQYLRSYKQLPMNFYQIQTKFRDE 142

Query: 373 PSGSLHGLMRVRGFTQDDAHVF 394
                 G+MR R F   DA+ F
Sbjct: 143 IRPRF-GVMRSREFIMKDAYSF 163


>gi|288818560|ref|YP_003432908.1| prolyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|288787960|dbj|BAI69707.1| prolyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|308752150|gb|ADO45633.1| prolyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
          Length = 569

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/176 (24%), Positives = 81/176 (46%), Gaps = 19/176 (10%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  SG+  +   G+++ + + + +R+++ +   +E+    +    LW+++G WD Y  
Sbjct: 32  IKQVASGIYAFTPAGYRVLKKIENIVRKEMDRSGAQELLLTVLNPAELWRETGRWDLYGR 91

Query: 317 NMFAVKCADDTIKDL--RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
            +F       T+KD   R + L P +      +    + SYR+LP  L +    +R+E  
Sbjct: 92  ELF-------TLKDRHGRDYCLGPTHEEEITDMVRTFVNSYRQLPFILYQIQVKFRDEKR 144

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR 430
               GL+R R F   DA+ F T E  F+  +    +       F +E+I  KL  +
Sbjct: 145 PRF-GLIRGREFIMKDAYSFDTDE--FSALMSYETM------KFAYERIFKKLRLK 191


>gi|323356826|ref|YP_004223222.1| prolyl-tRNA synthetase [Microbacterium testaceum StLB037]
 gi|323273197|dbj|BAJ73342.1| prolyl-tRNA synthetase [Microbacterium testaceum StLB037]
          Length = 600

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/191 (23%), Positives = 84/191 (43%), Gaps = 17/191 (8%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQ 298
           ++E   HR L R     +I  +  G+  W   G K+   + + +R ++ +    E++ P 
Sbjct: 21  DAEVASHRLLVRAG---YIRRNAPGIFAWLPLGLKVKAKIETVVREEMANAGAFEVHFPA 77

Query: 299 VLDQHLWQQSGHWDSYRANMFAV---KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           +L +  ++ +G W+ Y   +F +   K AD        + L P +      +      SY
Sbjct: 78  LLPREPYEVTGRWEEYGDALFRLQDRKGAD--------YLLAPTHEEMFTLLVKDLYSSY 129

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH-NLIISI 414
           ++LP+ + +    YR+E +    GL+R R FT  DA+ F   +   N   +   +    I
Sbjct: 130 KDLPLTIYQIQDKYRDE-ARPRAGLLRGREFTMKDAYSFDATDAGLNASYQAQRDAYERI 188

Query: 415 YKDFGFEKIMV 425
           +   G E ++V
Sbjct: 189 FTRLGLEYVIV 199


>gi|223040968|ref|ZP_03611229.1| prolyl-tRNA synthetase [Campylobacter rectus RM3267]
 gi|222877765|gb|EEF12885.1| prolyl-tRNA synthetase [Campylobacter rectus RM3267]
          Length = 570

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 65/134 (48%), Gaps = 7/134 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           GSG+  +   G ++ + + + ++ ++ +   +EI+   V    LW++SG +D Y   +  
Sbjct: 36  GSGLYNFLPLGKRVLENIKNIVKEELDEAGAQEISMSFVTSADLWRESGRFDVYGKELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            K  D    D   F L P N    VA+    + SY++LP+ L +  + +R+E      GL
Sbjct: 96  FK--DRKEND---FVLSPTNEESVVALVRGKVTSYKQLPLNLYQINTKFRDEARPRF-GL 149

Query: 381 MRVRGFTQDDAHVF 394
           +R R F   D + F
Sbjct: 150 LRGREFLMKDGYSF 163


>gi|161763540|ref|YP_081979.2| prolyl-tRNA synthetase [Bacillus cereus E33L]
 gi|114152167|sp|Q63GI2|SYP2_BACCZ RecName: Full=Prolyl-tRNA synthetase 2; AltName: Full=Proline--tRNA
           ligase 2; Short=ProRS 2
          Length = 476

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 83/400 (20%), Positives = 154/400 (38%), Gaps = 69/400 (17%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAV 321
           G +     G+ +++ +   M  K+K   +E +  P  + + L Q +  H + +   +  V
Sbjct: 37  GCMILRPYGYALWENMQKVMDEKLKATGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWV 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
               D  K      ++P +       F+  ++SY +LP    ++ SV R E +      +
Sbjct: 97  THGGDE-KLAERLCIRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKT--TRPFL 153

Query: 382 RVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           R   F   + H +  T E+   E L I NL  S  +D+    ++    T  EK  G+ A 
Sbjct: 154 RTTEFLWQEGHTIHETAEESQAETLNILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKAT 213

Query: 441 WDDAENIMKGVLDTIKNSSQD--RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
           +            TI++   D   + TG     G  +   F+    D  G+ WQ      
Sbjct: 214 Y------------TIESLMHDGKALQTGTSHNFGTNFSEAFDIKFLDRTGK-WQ------ 254

Query: 499 DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQ 554
                                   +H+  +G   R IG +I     N    +P  ++P+Q
Sbjct: 255 -----------------------YVHQTSWGVSTRMIGGLIMVHGDNNGLVMPPKVAPVQ 291

Query: 555 AIVTTIT-------SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIII 607
            ++  I        + A+E    I  + +     ++ D  N+T  +K  E+ +K IPI +
Sbjct: 292 VVIVPIAQHKEGVLAKAIELQGHIQKVAR-----VKIDASNKTPGWKFNEYEMKGIPIRL 346

Query: 608 ICGDKEASERSIGIRRFGSTTTQKVS---LLDAIPILTKE 644
             G K+  +  + + R  +   + +S   L + IP L +E
Sbjct: 347 EVGPKDIEKNQVVLVRRDTKEKEFISMDQLEERIPALLEE 386


>gi|24664387|ref|NP_524075.2| mitochondrial ribosomal protein L39 [Drosophila melanogaster]
 gi|27923994|sp|Q9VUJ0|RM39_DROME RecName: Full=39S ribosomal protein L39, mitochondrial;
           Short=MRP-L39; AltName: Full=MRP-L5
 gi|23093441|gb|AAF49686.2| mitochondrial ribosomal protein L39 [Drosophila melanogaster]
          Length = 333

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 62/233 (26%), Positives = 113/233 (48%), Gaps = 34/233 (14%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVC-DLSDPVREG-S 58
           +P D+ L   +G+I      +T  + A+ +S    K++    I+G V  D+  P++E  +
Sbjct: 65  LPEDVTLVM-NGNI------STPFNCAQHLSEGHCKRSALALIDGSVPWDMHRPLQESCT 117

Query: 59  IEIITPEDPRSLAVIR---HSCAHIMAEAVQSIW-PEVQVAI----GPIIEDG-FYYDFD 109
           ++++         V +    +C+ ++  A+   + PE  + +    GP I+ G F +D  
Sbjct: 118 LQLLNFHVSEPHVVNKAFWRTCSFMLGAALNRAFKPEANLQLHSFPGPNIKSGSFVHDIV 177

Query: 110 KE----QPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESI 165
            +    +P   +E+  +  +M ++ A+D    +  +  + A+E+F+  K  YK E L SI
Sbjct: 178 LQTQNWEP-GKEEMRALSAEMVKLAAQDLRIERLDVQQDLAQEMFKDSK--YKSEQLPSI 234

Query: 166 PAKEN--VTLYRQGEWFDLCRGPHVRSTGQVKK--FFKLMKVA-----GAYWR 209
             + N  VTLYR G+  D+ RGP V ST  + K       KVA     GA++R
Sbjct: 235 SQQTNGRVTLYRLGDHIDISRGPMVASTSFLGKCVISAAHKVAEEGPSGAFYR 287


>gi|326795786|ref|YP_004313606.1| prolyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
 gi|326546550|gb|ADZ91770.1| Prolyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
          Length = 577

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/168 (22%), Positives = 73/168 (43%), Gaps = 8/168 (4%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK 322
           G+  W   G ++ + + + +R ++ K    E+  P V    LW++SG W  Y   +  +K
Sbjct: 38  GLYTWLPTGLRVLKKVENIVRDEMEKAGALEVMMPGVQPAELWEESGRWQKYGPELLRMK 97

Query: 323 CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMR 382
              +     R + L P +      +  + L SY++LP+   +  + +R+E      G+MR
Sbjct: 98  DRHN-----RDYCLGPTHEEVITELARNELTSYKQLPINFFQIQTKFRDEVRPRF-GVMR 151

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKI-HNLIISIYKDFGFEKIMVKLST 429
            R F   DA+ F +      +   + H    +++   G +   V+  T
Sbjct: 152 SREFIMKDAYSFHSNSDSLRQTYDVMHQAYCNVFDRIGLDYRPVQADT 199


>gi|89070126|ref|ZP_01157455.1| prolyl-tRNA synthetase [Oceanicola granulosus HTCC2516]
 gi|89044243|gb|EAR50389.1| prolyl-tRNA synthetase [Oceanicola granulosus HTCC2516]
          Length = 466

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/183 (22%), Positives = 79/183 (43%), Gaps = 11/183 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I + G+G+  W   G+++ + +   +   + +  +  +  P +    LW++SG +D+Y  
Sbjct: 32  IKQAGAGIYSWLPLGYRVLKKIERIVHEEQQRAGHHPVLMPTLQTAELWRESGRYDAYGP 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  ++   D     R     P N      +F   + SY++LP+ L      +R+E    
Sbjct: 92  EMLRIRDRHD-----RDMLYGPTNEEMITDIFRSHVASYKDLPLTLYHIQWKFRDEVRPR 146

Query: 377 LHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
             G+MR R F   D + F  TKE   +   +     +  Y+  G + I ++  + P   +
Sbjct: 147 F-GVMRGREFLMKDGYNFDLTKEDALHAYNRHLVSYLRTYERMGLQAIPMRADSGP---I 202

Query: 436 GSD 438
           G D
Sbjct: 203 GGD 205


>gi|293401596|ref|ZP_06645738.1| proline--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291304854|gb|EFE46101.1| proline--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 563

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/178 (23%), Positives = 84/178 (47%), Gaps = 16/178 (8%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  SG+      G ++ Q + + +R ++     +E+  P ++ + ++++SG  +++ A
Sbjct: 32  IKKSSSGIYMIMPMGKRVLQKIETIVREEMDATGAQELLMPVLIPEEVYEKSGRREAFGA 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL----KSYRELPVRLAEFGSVYRNE 372
           NMFA+K           +  + +  P H  +F         SY++ P  L +  + +R+E
Sbjct: 92  NMFALK---------DRYQKRYVMGPTHEELFTIAATMKGSSYKDFPYNLYQIQTKFRDE 142

Query: 373 PSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
            +   +GL+RVR F   DA+ F   +E M    +K+ +    I +  G    +VK  T
Sbjct: 143 -TRPRYGLIRVREFIMKDAYSFDVDEESMHVSYMKMFHAYKKIMERLGLTYKIVKADT 199


>gi|228950947|ref|ZP_04113068.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228808674|gb|EEM55172.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
          Length = 476

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 83/400 (20%), Positives = 154/400 (38%), Gaps = 69/400 (17%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHLWQ-QSGHWDSYRANMFAV 321
           G +     G+ +++ +   M  K+K   +E +  P  + + L Q +  H + +   +  V
Sbjct: 37  GCMILRPYGYALWENMQKVMDEKLKGTGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWV 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
               D  K      ++P +       F+  ++SY +LP    ++ SV R E +      +
Sbjct: 97  THGGDE-KLAERLCVRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKT--TRPFL 153

Query: 382 RVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           R   F   + H +  T E+   E L I NL  S  +D+    ++    T  EK  G+ A 
Sbjct: 154 RTTEFLWQEGHTIHETAEESQAETLNILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKAT 213

Query: 441 WDDAENIMKGVLDTIKNSSQD--RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
           +            TI++   D   + TG     G  +   F+    D  G+ WQ      
Sbjct: 214 Y------------TIESLMHDGKALQTGTSHNFGTNFSEAFDIKFLDRNGK-WQ------ 254

Query: 499 DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQ 554
                                   +H+  +G   R IG +I     N    +P  ++P+Q
Sbjct: 255 -----------------------YVHQTSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQ 291

Query: 555 AIVTTIT-------SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIII 607
            ++  I        + A+E  + I  + +     ++ D  N+T  +K  E+ +K IPI +
Sbjct: 292 VVIVPIAQHKEGVLAKAIELQEHIQKVAR-----VKIDASNKTPGWKFNEYEMKGIPIRL 346

Query: 608 ICGDKEASERSIGIRRFGSTTTQKV---SLLDAIPILTKE 644
             G K+  +  + + R  +   + V    L + IP L +E
Sbjct: 347 EVGPKDIEKNQVVLVRRDTKEKEFVPMDQLEERIPALLEE 386


>gi|317154070|ref|YP_004122118.1| prolyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
 gi|316944321|gb|ADU63372.1| prolyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
          Length = 579

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 50/102 (49%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E++ P V    LWQ++G WD Y   +  +K      +  R + L P +      +    +
Sbjct: 68  EVSMPMVQPADLWQETGRWDYYGKELLRLK-----DRHGRDYCLGPTHEEVITDLVRGEI 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LP+ L +  + +R+E      GLMR R F   DA+ F
Sbjct: 123 KSYKQLPINLYQVQTKFRDEIRPRF-GLMRGREFIMKDAYSF 163


>gi|86606966|ref|YP_475729.1| prolyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
 gi|114152267|sp|Q2JSB6|SYP_SYNJA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|86555508|gb|ABD00466.1| prolyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
          Length = 609

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 88/200 (44%), Gaps = 24/200 (12%)

Query: 229 QELTQYLYFL-----EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYM 283
           Q L+Q L+        E+E   H+ L R   +  ++    G+  +    W++ Q +   +
Sbjct: 5   QRLSQMLFVTLREDPAEAELISHKLLLRGGFIRRLS---PGIYTYLPLLWRVLQKISDIV 61

Query: 284 RRKIKD-DYEEINTPQVLDQHLWQQSGHWDSY---RANMFAVKCADDTIKDLRTFALKPM 339
           R ++     +E   PQ+    +W++SG WD Y      MFA+K      +  R  AL P 
Sbjct: 62  REEMNAIGAQECLLPQLQPAEIWRESGRWDVYTQAEGIMFALKD-----RQGREQALGPT 116

Query: 340 NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQ 399
           +      +    ++SYR+LP  L +  + +R+E      GL+R R F   DA+ F   E+
Sbjct: 117 HEEVITLLARDLIRSYRQLPQILYQIQTKFRDEIRPRF-GLLRGREFLMKDAYSFHANEE 175

Query: 400 MFNECLKIHNLIISIYKDFG 419
              +  +       +Y+ +G
Sbjct: 176 SLRQTYQ------DMYRAYG 189


>gi|292491210|ref|YP_003526649.1| prolyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
 gi|291579805|gb|ADE14262.1| prolyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
          Length = 575

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/154 (23%), Positives = 68/154 (44%), Gaps = 11/154 (7%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           +G+  W   G ++ + +   +R ++ K   +EI  P V    LWQ++G W+ Y   +   
Sbjct: 37  AGLYTWLPLGLRVLRKVEGIIREEMDKAGAQEILMPAVQPAELWQETGRWEQYGPELLRF 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
                T +  R F   P +      +    ++SY++LP    +    +R+E      G+M
Sbjct: 97  -----TDRHQRPFCFGPTHEEVITDLIRREIRSYKQLPANFYQIQVKFRDEIRPRF-GVM 150

Query: 382 RVRGFTQDDAHVF----CTKEQMFNECLKIHNLI 411
           R R F   DA+ F     + EQ + +  + ++ I
Sbjct: 151 RAREFLMKDAYSFHLDQTSLEQTYQQMYETYSRI 184


>gi|238883498|gb|EEQ47136.1| hypothetical protein CAWG_05697 [Candida albicans WO-1]
          Length = 691

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 89/404 (22%), Positives = 156/404 (38%), Gaps = 63/404 (15%)

Query: 261 DGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH-LWQQSGHWDSYRANM 318
           D SG        + +++T+  +   +IK    +    P  + Q  L ++  H + +   +
Sbjct: 216 DVSGCYILRPNSYFVWETIQDWFNARIKKLGVQNTYFPMFVSQRVLEKEKDHIEGFAPEV 275

Query: 319 FAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLH 378
             V  A ++  D    A++P +       +   ++S+R+LP++L ++ SV R E      
Sbjct: 276 AWVTRAGNSELD-EHIAIRPTSETVMYPYYAKWIRSHRDLPLKLNQWNSVVRWEFKHP-Q 333

Query: 379 GLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGS 437
             +R R F   + H    TK+   NE L+I +    +Y++     ++    T  EK  G 
Sbjct: 334 PFLRTREFLWQEGHTAHLTKDAAANEVLQILDYYAGVYEELLAVPVVKGKKTENEKFAGG 393

Query: 438 DALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI- 496
           D                                    Y    E  +  A GR  Q GT  
Sbjct: 394 D------------------------------------YTTTVEGFIA-ATGRGIQGGTSH 416

Query: 497 QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP---- 552
            +  N    FN    N    +   +  ++  +G   R IG+MI     N  L L P    
Sbjct: 417 HLGTNFSKMFNISVENPEGSEKPRIFAYQNSWGLSTRVIGVMIMTHSDNKGLVLPPRIAQ 476

Query: 553 IQAIVTTI--TSSAV--------EYAQEIANLLKSHHLSIETDFRNETIN--YKIREHSI 600
            QA+V  +  TS +         E A++I   L+++ + +  D+R E  N  +K  +  +
Sbjct: 477 YQAVVIPVGLTSKSTDAQRKEINEGAEKIEQSLRANGIRVTGDYR-EIYNPGWKFADWEL 535

Query: 601 KKIPIIIICGDKEASERSIGI--RRFGSTTTQKVSLLDA-IPIL 641
           K +P+    G K+ +   + I  R  G   T K+  LD  +P L
Sbjct: 536 KGVPLRFEFGPKDLAGNQVTIVRRNDGKKYTVKLDELDTEVPKL 579


>gi|309805512|ref|ZP_07699557.1| proline--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
 gi|308165163|gb|EFO67401.1| proline--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
          Length = 472

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 59/120 (49%), Gaps = 12/120 (10%)

Query: 287 IKDDYEEINTPQVLDQH-----LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           I+++ E IN P+++  H     LW++SG    Y   MF +K      +  R   L P + 
Sbjct: 57  IEEEMENINVPEMIMPHFLPATLWEESGRLPKYGPEMFRLKD-----RHGRESLLGPTHE 111

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQM 400
                +    +KSY+++P+ L +  + +R+E      GL+R R F   D + F  T+EQ+
Sbjct: 112 ETFTEIIGKNIKSYKQMPIALYQIQTKFRDENRPRF-GLLRGREFVMLDGYSFAATREQL 170


>gi|311897171|dbj|BAJ29579.1| putative prolyl-tRNA synthetase [Kitasatospora setae KM-6054]
          Length = 586

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 15/158 (9%)

Query: 274 KIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           ++   +++ +R +++    +E   P +    LW+++G W+S    MF  +  D      R
Sbjct: 48  RVRARIVAVVREEMERIGAQEFLLPALHPAELWRRTGRWESMGEEMF--RLTD------R 99

Query: 333 TFALKPMNCPGHVAVFNH---GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
             A + +    H  VF H    L+SYR+LP    +F + +R+E      GL+RVR FT  
Sbjct: 100 KGAEQALGMT-HEEVFAHLAEELRSYRQLPQTWYQFQTKFRDEAR-PRSGLLRVREFTMK 157

Query: 390 DAHVFCTKEQMFNECLKIHNLI-ISIYKDFGFEKIMVK 426
           D++ F   E       + H L  + I++  G     V+
Sbjct: 158 DSYSFDLDEAGMARSFEAHRLAYLRIFERLGLPAFGVR 195


>gi|298373192|ref|ZP_06983182.1| proline--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058]
 gi|298276096|gb|EFI17647.1| proline--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058]
          Length = 493

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 71/316 (22%), Positives = 131/316 (41%), Gaps = 66/316 (20%)

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNEC 404
           + + + ++SYR+LP+ + ++ +V R E    L   +R   F   + H    T+E+   E 
Sbjct: 133 STYKNWIQSYRDLPILVNQWANVVRWEMRTRL--FLRTAEFLWQEGHTAHATREEAMEEA 190

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            K+ N    +Y DF  E+ M                   A  ++KG+      S+ +R  
Sbjct: 191 TKMLN----VYADFA-ERYM-------------------ALPVVKGI-----KSANERF- 220

Query: 465 TGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMI 523
                  GA      E +++D  G+  Q GT   +  N    F+  +VN  ++  +   +
Sbjct: 221 ------AGALETFCIEAMMQD--GKALQAGTSHFLGQNFAKAFDVQFVNKDNKLEY---V 269

Query: 524 HRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTITSSAVEYA------QEIAN 573
               +G   R +G +I     N    LP  L+PIQ ++  I  +A + A        + +
Sbjct: 270 WATSWGVSTRLMGALIMAHSDNNGLVLPPRLAPIQVVIVPIYKNAEQLAAVAERIHPVVD 329

Query: 574 LLKSHHLSIE-TDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK- 631
            L+S  +S++  D  N+   +K  E+ +K +P+ +  G ++    ++ + R      Q  
Sbjct: 330 RLRSLGVSVKFDDSDNKKPGWKFAEYELKGVPVRLALGGRDLENGTVEVFRRDKLEKQTM 389

Query: 632 ---------VSLLDAI 638
                    VSLLD I
Sbjct: 390 PLEGIEQYIVSLLDEI 405


>gi|304440717|ref|ZP_07400601.1| proline--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
 gi|304370904|gb|EFM24526.1| proline--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
          Length = 582

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/170 (22%), Positives = 76/170 (44%), Gaps = 10/170 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E   H+ L R      I    +G+  +   G+++ + +   +R ++ +   +EI    
Sbjct: 17  DAEVESHKLLLRAA---MIRRSTTGIYSYLPLGYRVVRKIEQIVREEMDRAGSQEILMSA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    +W++SG WD +   MF  K  D   ++ R F L P        +    + SY++L
Sbjct: 74  IQPAEIWEESGRWDKFGPEMF--KLVD---RNGRDFCLGPTAEEYFTTLVKDEVSSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
           P+ + +  + YR+E      G+ R R F   DA+ F   E+   +   ++
Sbjct: 129 PLNIYQIQTKYRDEKRPRF-GINRAREFLMKDAYSFDKDEEGLQKSYDMY 177


>gi|149178839|ref|ZP_01857419.1| alanyl-tRNA synthetase [Planctomyces maris DSM 8797]
 gi|148842314|gb|EDL56697.1| alanyl-tRNA synthetase [Planctomyces maris DSM 8797]
          Length = 875

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/148 (25%), Positives = 72/148 (48%), Gaps = 11/148 (7%)

Query: 50  LSDPVREGSIEIITPEDPRSLAVIR-HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYD 107
           L+  + +G     T  +PR   + R HS  H++  A+ ++  E  +  G  +E D   +D
Sbjct: 534 LTGKLEQGQTLTATVTEPRRSGIQRAHSATHLLHHALHTVLGENAMQRGSKVEEDTLRFD 593

Query: 108 FDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPA 167
           F   +  + +E+++IE  + + ++  +P   + +  +KAREL             E  P 
Sbjct: 594 FSHSKAVTPEEISRIEDIINQRVSEGAPVTTELMKLQKAREL------GAMALFGEKYP- 646

Query: 168 KENVTLYRQGEW-FDLCRGPHVRSTGQV 194
            + V + + G++  +LC G H+ +TGQV
Sbjct: 647 -DYVRVVQMGDFSTELCGGTHLSNTGQV 673


>gi|126735784|ref|ZP_01751529.1| alanyl-tRNA synthetase [Roseobacter sp. CCS2]
 gi|126714971|gb|EBA11837.1| alanyl-tRNA synthetase [Roseobacter sp. CCS2]
          Length = 885

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/163 (25%), Positives = 76/163 (46%), Gaps = 19/163 (11%)

Query: 45  GKVCDLS-DPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPI-IED 102
           G+  +L+ DPVR  +I+              HS  H++ EA++++  +     G +   D
Sbjct: 542 GQGAELAVDPVRRANIQA------------NHSATHLLNEALRAVLGDHIAQRGSLNGPD 589

Query: 103 GFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESK--KEAYKVE 160
              +DF   +  +  ELAQI++ +  II ++SP   + ++ + AR L       E Y  E
Sbjct: 590 RLRFDFSHTKALNDAELAQIDRDVNAIIRQNSPVETRIMTPDDARGLGAQALFGEKYGDE 649

Query: 161 I-LESIPAKENVTLYRQGEWF--DLCRGPHVRSTGQVKKFFKL 200
           + + S+  +E       G  +  +LC G HV+  G++  F  L
Sbjct: 650 VRVVSMGRQEGSGKGMGGNTYSLELCGGTHVKQLGEIGAFVTL 692


>gi|109493924|ref|XP_001069799.1| PREDICTED: mitochondrial ribosomal protein L39 [Rattus norvegicus]
 gi|149059737|gb|EDM10620.1| rCG58784, isoform CRA_a [Rattus norvegicus]
          Length = 336

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 88/192 (45%), Gaps = 24/192 (12%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIR---HS 76
           +T    A  +S    KK++   ++G+  D+  P+ +   I+ +T +DP    V +    S
Sbjct: 83  STPYSCAMHLSEWYCKKSILALVDGQPWDMYKPLTKSCEIKFLTFKDPDPREVNKAYWRS 142

Query: 77  CAHIMAEAVQSIWPE------VQVAIGPIIEDGFYYD------FDKEQPFSSDELAQIEK 124
           CA +M   ++  + +      V+V   P+I   F YD       D+  P + + L    K
Sbjct: 143 CAMMMGCVLERAFKDDYVVSLVRVPDVPVIAGAFCYDVALDKRLDEWMP-TKENLRSFTK 201

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN----VTLYRQGEWF 180
               +I RD PF    +  + A E+F+  K  YKV+ +E   A +N    V L+R G++ 
Sbjct: 202 DAHTLIYRDLPFETLEVDAKVALEIFQHNK--YKVDFIEE-KASQNPERIVKLHRIGDFI 258

Query: 181 DLCRGPHVRSTG 192
           D+  GP +  T 
Sbjct: 259 DVSEGPLIPRTS 270


>gi|326791435|ref|YP_004309256.1| phosphoribulokinase/uridine kinase [Clostridium lentocellum DSM
           5427]
 gi|326542199|gb|ADZ84058.1| phosphoribulokinase/uridine kinase [Clostridium lentocellum DSM
           5427]
          Length = 552

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/214 (21%), Positives = 91/214 (42%), Gaps = 14/214 (6%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE--GS 58
           M   +++ F DG         T  ++AE +        +         +L+ P+     +
Sbjct: 1   MSKMVRILFKDGKEIQVEKGTTFEELAEKVKGQGEYPIMLAETENSYKELASPILHDLSA 60

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           +  I   +   + V + S   ++  A + I+P   + +   I  G++ +F  +   S + 
Sbjct: 61  VRFIYLNEKDGMRVYQRSATFLLVAAAKRIFPGRHIIVNHHIAGGYFCEFKDDGLCSDEN 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFES-----KKEAYKVEILESIPAKENVTL 173
           + ++E+ M +++  + P  K+ LS E+A ELFE+     KKE +K            V +
Sbjct: 121 IQKLEEMMWQMVREELPIRKEVLSVEQAMELFEAEGMLDKKELFKYR------RTSTVNI 174

Query: 174 YRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAY 207
           YR  E  D   G  + +T  + + FKL+  A  +
Sbjct: 175 YRLDEAKDYFYGYMLTNTKAI-QLFKLIPYAHGF 207


>gi|18310329|ref|NP_562263.1| uridine kinase [Clostridium perfringens str. 13]
 gi|18145009|dbj|BAB81053.1| probable uridine kinase [Clostridium perfringens str. 13]
          Length = 554

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 76/146 (52%), Gaps = 2/146 (1%)

Query: 56  EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFS 115
           +G IE+I   DP        +   +  +A   ++ + ++ I   I  G + +  KE+   
Sbjct: 58  DGDIELINISDPHGKIAYSRTLQFVFIKATLDLFKDARINIEHSISKGTFGEIHKEKALD 117

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            +++ +I+KKMQEII ++    K  +  ++A ++F+S K   KV++L  +  +E V LY+
Sbjct: 118 EEDILKIKKKMQEIINKNIIIEKIKMPKKEAIDIFKSYKMQDKVDLLHWV-QEEYVNLYK 176

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLM 201
             + +D   G    STG V K+F L+
Sbjct: 177 LEDRYDYFYGDMAYSTG-VLKYFDLL 201


>gi|315653428|ref|ZP_07906350.1| proline--tRNA ligase [Lactobacillus iners ATCC 55195]
 gi|315489353|gb|EFU78993.1| proline--tRNA ligase [Lactobacillus iners ATCC 55195]
          Length = 487

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 59/120 (49%), Gaps = 12/120 (10%)

Query: 287 IKDDYEEINTPQVLDQH-----LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           I+++ E IN P+++  H     LW++SG    Y   MF +K      +  R   L P + 
Sbjct: 72  IEEEMENINVPEMIMPHFLPATLWEESGRLPKYGPEMFRLKD-----RHGRESLLGPTHE 126

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQM 400
                +    +KSY+++P+ L +  + +R+E      GL+R R F   D + F  T+EQ+
Sbjct: 127 ETFTEIIGKNIKSYKQMPIALYQIQTKFRDENRPRF-GLLRGREFVMLDGYSFAATREQL 185


>gi|302391162|ref|YP_003826982.1| prolyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
 gi|302203239|gb|ADL11917.1| prolyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
          Length = 569

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/162 (24%), Positives = 76/162 (46%), Gaps = 8/162 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           GSG+      G+K+ Q +   +R ++ K   +E+  P +    LW++S  W  Y   +  
Sbjct: 36  GSGIYSHLPLGYKVIQKVEDIIREEMNKAGAQEVLLPALQPAELWKESNRWADYGPELMR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +   +D  K  R F L P +      +    ++SY++LP  L +  + +R+E      G+
Sbjct: 96  L---EDRHK--RDFCLGPTHEEVITDLIKDEVRSYKDLPFNLYQIQTKFRDEIRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFE 421
           +R R F   DA+ F   ++  +E   K+++  + I+   G +
Sbjct: 150 LRSREFIMKDAYSFNPDKESLDESYEKMYDSYVEIFDRCGLD 191


>gi|309807201|ref|ZP_07701175.1| proline--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
 gi|308166422|gb|EFO68627.1| proline--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
          Length = 472

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 59/120 (49%), Gaps = 12/120 (10%)

Query: 287 IKDDYEEINTPQVLDQH-----LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           I+++ E IN P+++  H     LW++SG    Y   MF +K      +  R   L P + 
Sbjct: 57  IEEEMENINVPEMIMPHFLPATLWEESGRLPKYGPEMFRLKD-----RHGRESLLGPTHE 111

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQM 400
                +    +KSY+++P+ L +  + +R+E      GL+R R F   D + F  T+EQ+
Sbjct: 112 ETFTEIIGKNIKSYKQMPIALYQIQTKFRDENRPRF-GLLRGREFVMLDGYSFAATREQL 170


>gi|303248073|ref|ZP_07334338.1| prolyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
 gi|302490472|gb|EFL50380.1| prolyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
          Length = 575

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 72/156 (46%), Gaps = 10/156 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+E   H+ L R   +  +    +G+  +   G K    +   +R ++ +    EI  P 
Sbjct: 17  EAEVVSHKLLLRAGMIRKLT---AGIYTYLPLGLKALNNVARIVREEMDRAGALEILMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    LW++SG W+ Y   +  ++  D   +  R F L P +      +  H ++SYR+L
Sbjct: 74  VQPADLWKESGRWEFYGREL--LRFVD---RHEREFCLGPTHEEVVTDLVRHEIRSYRQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           P+ L +  + +R+E      GLMR R F   DA+ F
Sbjct: 129 PINLYQIQTKFRDEIRPRF-GLMRGREFVMKDAYSF 163


>gi|309808806|ref|ZP_07702691.1| proline--tRNA ligase [Lactobacillus iners LactinV 01V1-a]
 gi|308167932|gb|EFO70065.1| proline--tRNA ligase [Lactobacillus iners LactinV 01V1-a]
          Length = 472

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 59/120 (49%), Gaps = 12/120 (10%)

Query: 287 IKDDYEEINTPQVLDQH-----LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           I+++ E IN P+++  H     LW++SG    Y   MF +K      +  R   L P + 
Sbjct: 57  IEEEMENINVPEMIMPHFLPATLWEESGRLPKYGPEMFRLKD-----RHGRESLLGPTHE 111

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQM 400
                +    +KSY+++P+ L +  + +R+E      GL+R R F   D + F  T+EQ+
Sbjct: 112 ETFTEIIGKNIKSYKQMPIALYQIQTKFRDENRPRF-GLLRGREFVMLDGYSFAATREQL 170


>gi|169632514|ref|YP_001706250.1| prolyl-tRNA synthetase [Acinetobacter baumannii SDF]
 gi|226695258|sp|B0VRW9|SYP_ACIBS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|169151306|emb|CAP00010.1| prolyl-tRNA synthetase [Acinetobacter baumannii]
          Length = 571

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/154 (24%), Positives = 69/154 (44%), Gaps = 10/154 (6%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG+  W   G ++ + + + +R ++ +    E+  P      LW++SG ++ Y   +   
Sbjct: 37  SGLYTWLPMGTRVLKKVDAIVREEMNRSGAMEVFMPVTQPASLWEESGRYEQYGPGLLRF 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           K   D       F L P +      +  + LKSY++LPV   +  + +R+E      G+M
Sbjct: 97  KDRHDN-----PFVLGPTHEEVITDLARNELKSYKQLPVNFYQIQTKFRDEIRPRF-GVM 150

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           R R F   DA+ F   ++   E    +N++   Y
Sbjct: 151 RSREFIMKDAYSFHATQESLQET---YNVMYDTY 181


>gi|58332576|ref|NP_001011362.1| mitochondrial ribosomal protein L39 [Xenopus (Silurana) tropicalis]
 gi|56789558|gb|AAH88527.1| mitochondrial ribosomal protein L39 [Xenopus (Silurana) tropicalis]
          Length = 331

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 57/250 (22%), Positives = 113/250 (45%), Gaps = 31/250 (12%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT--PEDPRSL-AVIRHS 76
           +T    A  +S     ++V   ++G+V D+  P+ +  +I+ +T   EDP  +      S
Sbjct: 78  STPYHCALHLSEWYCSRSVLALVDGEVWDMYKPLTKSCNIQFLTFKDEDPEEVNKAYWRS 137

Query: 77  CAHIMAEAVQSIWPE------VQVAIGPIIEDGFYYD------FDKEQPFSSDELAQIEK 124
           CA I+   +++ + E      ++    P+I   F YD       D  +P + + L  + +
Sbjct: 138 CAMILGCVLENAFKEEYMVNLIRAPEIPVISGAFCYDVVLDSRLDDWRP-TEENLRSLTR 196

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN----VTLYRQGEWF 180
           +   +I +D PF    +  + A+E+F+     YK+ I+    A +N    VT++R G++ 
Sbjct: 197 EAHSLIHKDLPFESLEVEEKVAKEIFQHS--PYKL-IMAEEKASQNPQGLVTVHRFGDFV 253

Query: 181 DLCRGPHVRSTGQVKKF-----FKLMKVAGAYWR--GDSNRPMLSRIYGTAWNTQQELTQ 233
           DL  GPH+  T   +++       L  +   + R     + P   + + T WN  +  +Q
Sbjct: 254 DLTEGPHIPRTSFCQQYEVTAGHSLANIPSEHVRRFQGLSLPWHLKAHHTVWNRLRTRSQ 313

Query: 234 YLYFLEESEK 243
            L   E +++
Sbjct: 314 RLVTEEHNQE 323


>gi|255322659|ref|ZP_05363803.1| prolyl-tRNA synthetase [Campylobacter showae RM3277]
 gi|255300220|gb|EET79493.1| prolyl-tRNA synthetase [Campylobacter showae RM3277]
          Length = 570

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 65/134 (48%), Gaps = 7/134 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           GSG+  +   G ++ + + + ++ ++ +   +EI+   V    LW++SG +D Y   +  
Sbjct: 36  GSGLYNFLPLGKRVLENIKNIVKEELDEAGAQEISMSFVTSADLWRESGRFDVYGKELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            K  D    D   F L P N    VA+    + SY++LP+ L +  + +R+E      GL
Sbjct: 96  FK--DRKEND---FVLSPTNEESVVALVRGKVTSYKQLPLNLYQINTKFRDEARPRF-GL 149

Query: 381 MRVRGFTQDDAHVF 394
           +R R F   D + F
Sbjct: 150 LRGREFLMKDGYSF 163


>gi|328777880|ref|XP_003249412.1| PREDICTED: 39S ribosomal protein L39, mitochondrial-like [Apis
           mellifera]
          Length = 331

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/239 (19%), Positives = 108/239 (45%), Gaps = 23/239 (9%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS----IEIITPEDPRSLAVIRHS 76
           +T +D A  IS  L+K +    ++G   D++ P+        + +++PE+    A    +
Sbjct: 74  STPTDCARHISEGLSKVSALALVDGSPWDMNKPLTSSCKLKLLNLLSPENKVVNAAFWRT 133

Query: 77  CAHIMAEAVQSIW-PEVQVAIG----PIIEDG-----FYYDFDKEQPFSSDELAQIEKKM 126
           C+ I+   +   + P++++ +     P+I+ G      Y D +  +P +  E+  +  + 
Sbjct: 134 CSFILGAVIDMAFKPDIEIHLHSFPIPVIKSGSFIYDVYLDLNNWEPVT-QEMRALSAQF 192

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWFDLCRG 185
            +++ ++ P  +   +   A ++F++     K +I E + +  N +TLYR G   D+ +G
Sbjct: 193 IKLVNQELPIERIDTTESVALDIFQNNPIKLK-QIPEIVKSNNNKITLYRIGNHIDISKG 251

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           P + ++  + +      +   +     N+  + R  G A      L Q+ Y L E+  +
Sbjct: 252 PMIGNSSLIGR----CTITAVH--EVPNKEKIYRFQGVALPKGILLNQFAYSLLENRAK 304


>gi|78357417|ref|YP_388866.1| alanyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|123552081|sp|Q30YS5|SYA_DESDG RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|78219822|gb|ABB39171.1| alanyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 880

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/151 (23%), Positives = 74/151 (49%), Gaps = 18/151 (11%)

Query: 54  VREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQ 112
           +R+ ++ +   E  R  +   H+C HI+  A++ +  + V+ A   +  +   +DF    
Sbjct: 550 LRDQAVTLTVREGQRFASARNHTCTHILHAALRKVLGDHVKQAGSLVGPERLRFDFTHIS 609

Query: 113 PFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPA 167
             + +E+  +E ++  +I  D     ++++++ A +     LF  K E+ +V ++ SIP 
Sbjct: 610 AMTPEEILAVENEVNRVILSDIALNSEHMAYDDAVQKGAMALFGEKYES-EVRVV-SIP- 666

Query: 168 KENVTLYRQGEWFDLCRGPHVRSTGQVKKFF 198
                    GE  +LC G H+R+TGQ   F+
Sbjct: 667 ---------GESVELCGGTHLRATGQAGSFY 688


>gi|329942565|ref|ZP_08291375.1| prolyl-tRNA synthetase [Chlamydophila psittaci Cal10]
 gi|332287196|ref|YP_004422097.1| prolyl-tRNA synthetase [Chlamydophila psittaci 6BC]
 gi|313847792|emb|CBY16782.1| prolyl-tRNA synthetase [Chlamydophila psittaci RD1]
 gi|325506498|gb|ADZ18136.1| prolyl-tRNA synthetase [Chlamydophila psittaci 6BC]
 gi|328815475|gb|EGF85463.1| prolyl-tRNA synthetase [Chlamydophila psittaci Cal10]
 gi|328914444|gb|AEB55277.1| prolyl-tRNA synthetase [Chlamydophila psittaci 6BC]
          Length = 577

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/174 (21%), Positives = 80/174 (45%), Gaps = 14/174 (8%)

Query: 263 SGVIFWHRKG--------WKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDS 313
           +G IF   KG        W++ + ++  +R ++     +E+  P +    LWQ++G W++
Sbjct: 29  AGYIFKTAKGIYTYTPLFWRVARKMMEIIREELNAIGGQELVLPILHPAELWQKTGRWEA 88

Query: 314 YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP 373
           +R+        D   ++ + F L P +        +  L   + LP+ L +  + +R+E 
Sbjct: 89  FRSEGLLYTLKD---REDKEFCLAPTHEEIVSLFVSQWLSGRKHLPLHLYQIATKFRDEI 145

Query: 374 SGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKDFGFEKIMVK 426
                GLMR + F  +D++ F  + EQM  +  K+     +I+     + ++V+
Sbjct: 146 RPRF-GLMRAKEFLMEDSYTFSDSPEQMNKQYAKLRQAYQNIFDRLDIQYVIVE 198


>gi|299142098|ref|ZP_07035232.1| phosphoribulokinase family protein [Prevotella oris C735]
 gi|298576560|gb|EFI48432.1| phosphoribulokinase family protein [Prevotella oris C735]
          Length = 553

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/180 (21%), Positives = 79/180 (43%), Gaps = 2/180 (1%)

Query: 19  VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSC 77
           + +T SD+    +  +    +   +N KV  +   V     +E +    P +      + 
Sbjct: 20  IGSTLSDIFSQFNLPMPYGPICAKVNNKVEGMHYRVYHSKDVEFLDMHSPSASRNYTRTL 79

Query: 78  AHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFL 137
             ++ +AV  ++P+  V I   + +G+Y +     P    ++ +I ++MQEII    P  
Sbjct: 80  FFVLCKAVHDLYPKSYVIIDIPVSNGYYVNLQLGHPVEQTDVDRIRRRMQEIIDAHMPVK 139

Query: 138 KQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
           +  +  E+A ++F  + +  K ++LES   K   T Y   ++ D   G  + +T  +  F
Sbjct: 140 RFEVPAEQAIKMFRDRGDEAKAKLLES-AGKLYTTYYEIDDYVDFYYGSLLTNTRSLYLF 198


>gi|304436529|ref|ZP_07396502.1| proline--tRNA ligase [Selenomonas sp. oral taxon 149 str. 67H29BP]
 gi|304370472|gb|EFM24124.1| proline--tRNA ligase [Selenomonas sp. oral taxon 149 str. 67H29BP]
          Length = 569

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 63/138 (45%), Gaps = 7/138 (5%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +   G+  +    W+  + +   +R ++     +EI  P +    LW++SG W +Y A
Sbjct: 32  IRKSAGGMYTYLPLAWRTIRKIEQIIREEMDAAGGQEIMMPILQPSELWEESGRWGAYGA 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  VK      +  R F + P +     A+    ++SY++LP+ L +    +R+E    
Sbjct: 92  EMICVK-----DRHGREFCMGPTHEEMITALVRDEVRSYKQLPLMLYQIQDKFRDERRPR 146

Query: 377 LHGLMRVRGFTQDDAHVF 394
             G+MR R F   D + F
Sbjct: 147 F-GVMRSREFIMKDLYSF 163


>gi|258515483|ref|YP_003191705.1| alanyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
 gi|257779188|gb|ACV63082.1| alanyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
          Length = 878

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 89/197 (45%), Gaps = 23/197 (11%)

Query: 12  GSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKV----CDLSDPVREGSIEIITPEDP 67
           G + +F V  +G D+   IS+ +      +   GKV      ++D V+      I     
Sbjct: 503 GQVTDFAV-LSGQDLNVMISQVIKPVENLIVHKGKVESGLLQVNDTVK------IEVAGE 555

Query: 68  RSLAVIR-HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKK 125
           R L++ R HS  H++ +A++ +  E     G ++E D   +DF      S++EL +IEK 
Sbjct: 556 RRLSIARNHSATHLLHKALKEVLGEHVNQAGSLVEPDRLRFDFTHYAAVSNEELNKIEKI 615

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCR 184
           +   I  + P      S  KARE+  +     K   L        V + + GE+  +LC 
Sbjct: 616 VNRTILSNLPVTVSESSLSKAREMGAAALFGEKYGDL--------VRVVKMGEFSLELCG 667

Query: 185 GPHVRSTGQVKKFFKLM 201
           G H+ ST ++   FKL+
Sbjct: 668 GTHIHSTAEI-GLFKLI 683


>gi|30018647|ref|NP_830278.1| prolyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|229125889|ref|ZP_04254914.1| Prolyl-tRNA synthetase 2 [Bacillus cereus BDRD-Cer4]
 gi|81435975|sp|Q81IE9|SYP2_BACCR RecName: Full=Prolyl-tRNA synthetase 2; AltName: Full=Proline--tRNA
           ligase 2; Short=ProRS 2
 gi|29894188|gb|AAP07479.1| Prolyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|228657547|gb|EEL13360.1| Prolyl-tRNA synthetase 2 [Bacillus cereus BDRD-Cer4]
          Length = 476

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 85/396 (21%), Positives = 153/396 (38%), Gaps = 61/396 (15%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHLWQ-QSGHWDSYRANMFAV 321
           G +     G+ +++ +   M  K+K+  +E +  P  + + L Q +  H + +   +  V
Sbjct: 37  GCMILRPYGYALWENMQKVMDEKLKETGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWV 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
               D  K      ++P +       F+  ++SY +LP    ++ SV R E +      +
Sbjct: 97  THGGDE-KLAERLCVRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKT--TRPFL 153

Query: 382 RVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           R   F   + H +  T E+   E L I NL  S  +D+    ++    T  EK  G+ A 
Sbjct: 154 RTTEFLWQEGHTIHETAEESQAETLNILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKAT 213

Query: 441 WDDAENIMKGVLDTIKNSSQD--RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
           +            TI++   D   + TG     G  +   F+    D  G+ WQ      
Sbjct: 214 Y------------TIESLMHDGKALQTGTSHNFGTNFSEAFDIKFLDRNGK-WQ------ 254

Query: 499 DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQ 554
                                   +H+  +G   R IG +I     N    LP  ++P+Q
Sbjct: 255 -----------------------YVHQTSWGVSTRMIGGLIMVHSDNNGLVLPPKVAPVQ 291

Query: 555 AIVTTITSSAVEYAQEIANLLKSH---HLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
            ++  I     E     A  L++H      ++ D  N+T  +K  E+ +K IPI +  G 
Sbjct: 292 VVIVPIAQHK-EGVLAKATELQAHIQKVARVKIDASNKTPGWKFNEYEMKGIPIRLEVGP 350

Query: 612 KEASERSIGIRRFGSTTTQKV---SLLDAIPILTKE 644
           K+  +  + + R  +   + V    L + IP L +E
Sbjct: 351 KDIEKNQVVLVRRDTKEKEFVPMDQLEERIPALLEE 386


>gi|229176981|ref|ZP_04304376.1| Prolyl-tRNA synthetase 2 [Bacillus cereus 172560W]
 gi|229188661|ref|ZP_04315700.1| Prolyl-tRNA synthetase 2 [Bacillus cereus ATCC 10876]
 gi|228594850|gb|EEK52630.1| Prolyl-tRNA synthetase 2 [Bacillus cereus ATCC 10876]
 gi|228606456|gb|EEK63882.1| Prolyl-tRNA synthetase 2 [Bacillus cereus 172560W]
          Length = 476

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 83/400 (20%), Positives = 154/400 (38%), Gaps = 69/400 (17%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHLWQ-QSGHWDSYRANMFAV 321
           G +     G+ +++ +   M  K+K+  +E +  P  + + L Q +  H + +   +  V
Sbjct: 37  GCMILRPYGYALWENMQKVMDEKLKETGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWV 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
               D  K      ++P +       F+  ++SY +LP    ++ SV R E +      +
Sbjct: 97  THGGDE-KLAERLCVRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKT--TRPFL 153

Query: 382 RVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           R   F   + H +  T E+   E L I NL  S  +D+    ++    T  EK  G+ A 
Sbjct: 154 RTTEFLWQEGHTIHETAEESQAETLNILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKAT 213

Query: 441 WDDAENIMKGVLDTIKNSSQD--RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
           +            TI++   D   + TG     G  +   F+    D  G+ WQ      
Sbjct: 214 Y------------TIESLMHDGKALQTGTSHNFGTNFSEAFDIKFLDRNGK-WQ------ 254

Query: 499 DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQ 554
                                   +H+  +G   R IG +I     N    +P  ++P+Q
Sbjct: 255 -----------------------YVHQTSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQ 291

Query: 555 AIVTTIT-------SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIII 607
            ++  I        + A+E    I  + +     ++ D  N+T  +K  E+ +K IPI +
Sbjct: 292 VVIVPIAQHKEGVLAKAIELQAHIQKVAR-----VKIDASNKTPGWKFNEYEMKGIPIRL 346

Query: 608 ICGDKEASERSIGIRRFGSTTTQKV---SLLDAIPILTKE 644
             G K+  +  + + R  +   + V    L + IP L +E
Sbjct: 347 EVGPKDIEKNQVVLVRRDTKEKEFVPMDQLEERIPALLEE 386


>gi|57506111|ref|ZP_00372033.1| alanyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
 gi|57015595|gb|EAL52387.1| alanyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
          Length = 844

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 71/147 (48%), Gaps = 20/147 (13%)

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIE 123
           ED R      HS  H++  A++ I        G ++E +   +DF+  +  + +EL +IE
Sbjct: 541 EDKREQIARHHSATHLLHYALRKILGTHIAQAGSLVEFNKLRFDFNHPKALTKEELEKIE 600

Query: 124 KKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGE 178
             + E+I+   P L + +S + A++     LF  K E+ KV +L              GE
Sbjct: 601 NLVNEMISSSYPALLEEMSLDDAKKSGAIALFSEKYES-KVRVL------------SLGE 647

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAG 205
             +LC G HV ++ ++  FF ++K +G
Sbjct: 648 SKELCGGTHVNNSAEIGSFF-ILKESG 673


>gi|91774775|ref|YP_544531.1| prolyl-tRNA synthetase [Methylobacillus flagellatus KT]
 gi|123254834|sp|Q1H497|SYP_METFK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|91708762|gb|ABE48690.1| prolyl-tRNA synthetase [Methylobacillus flagellatus KT]
          Length = 573

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/205 (20%), Positives = 89/205 (43%), Gaps = 17/205 (8%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           TQ+E  Q      E+E   H+ + R   +  +   GSG+  W   G ++ + + + +R +
Sbjct: 10  TQKEAPQ------EAELASHKLMLRAGLIKRL---GSGLYSWMPLGLRVLRKVETIVREE 60

Query: 287 I-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           + +    E+  P V  + LW+++G W  +   M  ++   +     R F   P +     
Sbjct: 61  MNRAGALELLMPAVQPKELWEETGRWAVFGPQMLKIRDRHE-----RDFCFGPTHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    ++SY++LP+   +  + +R+E      G+MR R F   D + F T  +   +  
Sbjct: 116 DIARREIRSYKQLPLNFYQIQTKFRDEIRPRF-GVMRAREFVMKDGYSFHTSLESLQQTY 174

Query: 406 -KIHNLIISIYKDFGFEKIMVKLST 429
             ++    +I+   G +   V+  T
Sbjct: 175 DTMYQAYSNIFNRLGLKFRAVRADT 199


>gi|167564170|ref|ZP_02357086.1| prolyl-tRNA synthetase [Burkholderia oklahomensis EO147]
 gi|167571291|ref|ZP_02364165.1| prolyl-tRNA synthetase [Burkholderia oklahomensis C6786]
          Length = 578

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 59/130 (45%), Gaps = 7/130 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P V    LWQ+SG W+ Y   +   K  D    D   F + P +      +  + +
Sbjct: 68  ELLMPAVQPAELWQESGRWEQYGPELLRFK--DRKQND---FVIGPTHEEVITDIARNQI 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLI 411
           KSYR++PV   +  + +R+E      G+MR R F   DA+ F    +   E   K+++  
Sbjct: 123 KSYRQMPVNFYQIQTKFRDEIRPRF-GVMRGREFLMKDAYSFDRDHEGLKESYKKMYDAY 181

Query: 412 ISIYKDFGFE 421
           + ++   G E
Sbjct: 182 VRVFTRIGLE 191


>gi|147918785|ref|YP_687490.1| prolyl-tRNA synthetase [uncultured methanogenic archaeon RC-I]
 gi|121690208|sp|Q0W0C9|SYP_UNCMA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|110622886|emb|CAJ38164.1| prolyl-tRNA synthetase [uncultured methanogenic archaeon RC-I]
          Length = 474

 Score = 52.0 bits (123), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 87/400 (21%), Positives = 166/400 (41%), Gaps = 67/400 (16%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQ-HLWQQSGHWDSYRANMFAVK 322
           GV  W+  G+ I + + + +R  +  D++E   P ++ +  L ++S H   +   ++ V 
Sbjct: 36  GVYVWYPFGFSIRKKVYNMLRNLLDVDHQETYFPMLIPKPELLKESEHIKGFEDEVYWV- 94

Query: 323 CADDTIKDLRT-FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
                + +L    AL+P +      ++   ++S+ +LP++L +  + +R E +     L+
Sbjct: 95  -THGGLSELEVPLALRPTSETAIYPMYKLWIRSHADLPLKLYQIVNTFRYE-TKHTRPLI 152

Query: 382 RVRGFTQ-DDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK--LSTRPEKRVGSD 438
           R+R  T   +AH   T    +++  K  +  + +Y +F F K+ V   +  RPE      
Sbjct: 153 RLREITSFKEAH---TAHATWDDAEKQVHEAMDLYSEF-FTKLAVPFIVHKRPE------ 202

Query: 439 ALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
             WD                             GA Y   F+ ++ D  G+  Q GT+  
Sbjct: 203 --WDKF--------------------------PGADYTMAFDTMMPD--GKSLQVGTVH- 231

Query: 499 DFNLPSRFNAFY-VNSHSEKCHPVMIHRAVFGSIER----FIGIMIENFKGNLPLWLSPI 553
             +L ++F   Y +    EK     +++  +G  ER     IGI  +N    LP   S  
Sbjct: 232 --HLGTKFAKTYDITYEDEKGERQYVNQTCYGISERCIAAVIGIHGDNKGLVLPPNASQT 289

Query: 554 QAIVTTIT-----SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIII 608
           Q ++  I          E  Q++  LL+++ +    D  +E    K  +  +K  P  I 
Sbjct: 290 QVVIIPIIFKKDDGGVKEACQKVKELLRANDIVAVIDDADERPGAKYYKWEMKGTPFRIE 349

Query: 609 CGDKEASERSIG-IRRFGSTTTQKVSL-LDAIPILTKESL 646
            G ++    S+  +RR G    +K S+ +D +P   +  L
Sbjct: 350 IGPRDIKNNSVMLVRRDG----KKESIPMDGLPETVRNKL 385


>gi|289548806|ref|YP_003473794.1| prolyl-tRNA synthetase [Thermocrinis albus DSM 14484]
 gi|289182423|gb|ADC89667.1| prolyl-tRNA synthetase [Thermocrinis albus DSM 14484]
          Length = 570

 Score = 52.0 bits (123), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 82/178 (46%), Gaps = 16/178 (8%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  SGV  +     ++ + + S +R+++ +   +E+    +    LW+++G WD Y  
Sbjct: 32  IKQIASGVYQYTPPALRVLRKIESIVRKEMDRTGAQEVLLTVLNPAELWRETGRWDLYGR 91

Query: 317 NMFAVKCADDTIKDL--RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
            +F       T+KD   R + L P +      +F   + SYR+LP+ L +    +R+E  
Sbjct: 92  ELF-------TLKDRHGRDYCLGPTHEEEVTDLFRSYVTSYRQLPLILYQIQVKFRDEKR 144

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS---IYKDFGFEKIMVKLST 429
               GL+R R F   DA+ F   E  F+  +    +  +   I+K    + +MV+ S 
Sbjct: 145 PRF-GLIRAREFIMKDAYSFDLDE--FSAIMSYEAMKFAYDRIFKKMRLKTLMVEASV 199


>gi|184155197|ref|YP_001843537.1| prolyl-tRNA synthase [Lactobacillus fermentum IFO 3956]
 gi|226701302|sp|B2GBM5|SYP_LACF3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|183226541|dbj|BAG27057.1| prolyl-tRNA synthase [Lactobacillus fermentum IFO 3956]
          Length = 573

 Score = 52.0 bits (123), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/185 (20%), Positives = 90/185 (48%), Gaps = 14/185 (7%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E   H+ + R   ++ ++   +GV  +    +++ + +   +R ++ K    E+  P 
Sbjct: 17  DAEVLSHKMMVRAGYIYQVS---AGVWAYLPLAYRVIRKIEQIIREEMDKAGAVEMLLPG 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L   LW++SG +++Y  N+F +K   +     R F L P +     ++    + SY++L
Sbjct: 74  LLPADLWKESGRYEAYGDNLFKLKDRRE-----RDFILGPTHEETVTSILRDAIHSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+ + +    YR+E     +G++R + F   D + F   +   ++    ++L    Y++ 
Sbjct: 129 PLVVYQLQDKYRDEDR-PRYGILRGKEFEMLDGYSFSADQAGLDQA---YDLQAKAYRNI 184

Query: 419 GFEKI 423
            F++I
Sbjct: 185 -FDRI 188


>gi|329764876|ref|ZP_08256467.1| prolyl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
 gi|329138662|gb|EGG42907.1| prolyl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
          Length = 480

 Score = 52.0 bits (123), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 83/377 (22%), Positives = 156/377 (41%), Gaps = 70/377 (18%)

Query: 264 GVIFWHRKGWKIFQTLIS-----YMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANM 318
           G+I     G+ I+++L S     + +  I++ +  I  P+ L   L ++  H+  +   +
Sbjct: 37  GLIVLRPDGYSIWESLRSTFDEKFSKNGIRNGFLPILIPESL---LGKEKKHFAGFNPEV 93

Query: 319 FAVK-CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           F V    ++ + D    AL+P +      +++  ++S+R+LP+++  + +  R E   + 
Sbjct: 94  FWVTHSGENEVGD--RLALRPTSETLAYTMYSKWIQSWRDLPLKINFWNTALRAEIKAT- 150

Query: 378 HGLMRVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
              +R   F   + H V   +E+   E +KI    + IYK    +++ + + T       
Sbjct: 151 KPFLRTSEFLWQEGHTVHAVQEEAEREVMKI----LEIYKKTVEDELAIPVITG------ 200

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGT- 495
                              K S +++         GA Y    E I+ D  G+  Q GT 
Sbjct: 201 -------------------KKSEKEKFV-------GAVYTTTMESIMPD--GKALQMGTS 232

Query: 496 --IQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI---ENFKG-NLPLW 549
             +  +F++P     F V    +        +  +G   R IG MI    + KG  LP  
Sbjct: 233 HFLGQNFSIP-----FEVKFADKDNVEQFAWQTSWGVSWRLIGAMIMVHGDDKGLVLPPK 287

Query: 550 LSPIQAIVTTITSS------AVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKK 602
           ++PIQ ++  I  S            EI   L++  + +  D RNE T  YK  +  +K 
Sbjct: 288 VAPIQVVIVPIYKSDDARNIVFPKLNEIKEQLETKKIRVHVDDRNELTPGYKFNDWELKG 347

Query: 603 IPIIIICGDKEASERSI 619
           +P+ I  G K+  ++ I
Sbjct: 348 VPLRIEIGPKDIEKQQI 364


>gi|317125361|ref|YP_004099473.1| prolyl-tRNA synthetase [Intrasporangium calvum DSM 43043]
 gi|315589449|gb|ADU48746.1| prolyl-tRNA synthetase [Intrasporangium calvum DSM 43043]
          Length = 588

 Score = 52.0 bits (123), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 46/196 (23%), Positives = 88/196 (44%), Gaps = 25/196 (12%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   HR L R   +  ++    GV  W   G ++ + +   +R ++     +E+  P 
Sbjct: 19  DAEVPSHRLLVRAGYIRRVS---PGVYTWLPLGLRVLRNVERIVREEMDAIGAQELLFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAV---KCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-- 353
           +L +  +  SG W  Y  N+F +   K AD  +             P H  +F   +K  
Sbjct: 76  LLPREPFDASGRWAEYGDNIFRLQDRKGADHLLG------------PTHEEMFTLTVKDL 123

Query: 354 --SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH-NL 410
             SY++LP+ + +  + YR+E +    GL+R R F   D++ F   E   ++  + H + 
Sbjct: 124 YSSYKDLPLSIYQIQTKYRDE-ARPRAGLLRGREFVMKDSYSFDIDEAGLDKSYQAHRDA 182

Query: 411 IISIYKDFGFEKIMVK 426
            + I+   GF  ++V+
Sbjct: 183 YVRIFDRLGFHYVIVE 198


>gi|171691298|ref|XP_001910574.1| hypothetical protein [Podospora anserina S mat+]
 gi|170945597|emb|CAP71710.1| unnamed protein product [Podospora anserina S mat+]
          Length = 551

 Score = 52.0 bits (123), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 89/394 (22%), Positives = 158/394 (40%), Gaps = 71/394 (18%)

Query: 275 IFQTLISYMRRKIKD-DYEEINTPQVLDQ-HLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           I+ T+  +   +I+    EE N P  L    L ++  H + +   +  V  A +  KDL 
Sbjct: 88  IWNTIRKWFNERIEAAGVEECNFPMFLSSTSLQKEKDHVEGFAPELAWVTKAGE--KDLE 145

Query: 333 T-FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
              A++P +       ++  ++S+R+LP++L ++ SV R E   ++   +R R F   + 
Sbjct: 146 VPVAVRPTSEAVMYPYYSKWIRSHRDLPLKLNQWVSVVRWEAKQTVP-FLRAREFMWQEG 204

Query: 392 HV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKG 450
           H  F ++EQ   E L+I  L   IY     E+++     R +K         +AE     
Sbjct: 205 HTAFVSEEQAGKEVLEILELYAGIY-----EQLLAVPVVRGKK--------TEAEKFA-- 249

Query: 451 VLDTIKNSSQDRINTGVLLGEGAFYGPKFE-YILKDAIGRDWQCGTIQVDFNLPSRFNAF 509
                                G +Y    E YI  +  GR  Q  T        S+    
Sbjct: 250 ---------------------GGYYTTTVEGYIPSN--GRGIQGATSHCLGQNFSKMFDI 286

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMI---ENFKG-NLPLWLSPIQAIVTTITSSA- 564
            V   + K   + + +  +G   R IG+M+    + KG  LP  ++  QAI+  +  +A 
Sbjct: 287 TVEDPTNKGQKIHVWQNSWGLSTRVIGVMVMIHGDDKGLVLPPRIAKTQAILIPVGLTAK 346

Query: 565 ---------VEYAQEIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEA 614
                    ++   E+  +LK   +  E D R   T  +K  +  +K +P+ +  G K+A
Sbjct: 347 TTPEDKEKHLDRMYELLAILKKAGVRTEIDTREGYTPAWKFNDWEMKGVPVRLEFGPKDA 406

Query: 615 SERSIGIRR----------FGSTTTQKVSLLDAI 638
           ++  +   R           G  TT+   LL+ I
Sbjct: 407 AKDVVSFARRDTGEKGTIPIGELTTKVPELLETI 440


>gi|242278211|ref|YP_002990340.1| prolyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
 gi|259511591|sp|C6BYX7|SYP_DESAD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|242121105|gb|ACS78801.1| prolyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
          Length = 580

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 71/156 (45%), Gaps = 10/156 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+E   H+ L R   +  +    SG+  +   G K    + + +R ++ +    E+  P 
Sbjct: 17  EAEVVSHKLLMRAGMIRKLT---SGIYNYLPLGLKSVNKVAAIVREEMNRAGALEVLMPM 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    LWQ++G WD Y   +  VK      +  R + L P +      +    +KSY++L
Sbjct: 74  VQPGDLWQETGRWDYYGKELLRVK-----DRHGRDYCLGPTHEEVITDLVRGEVKSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           P+ L +  + +R+E      GLMR R F   DA+ F
Sbjct: 129 PLNLYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSF 163


>gi|148244484|ref|YP_001219178.1| prolyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA]
 gi|166980170|sp|A5CX68|SYP_VESOH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|146326311|dbj|BAF61454.1| prolyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA]
          Length = 560

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/137 (25%), Positives = 68/137 (49%), Gaps = 7/137 (5%)

Query: 272 GWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G ++ Q + + +R+++ K   +E+  P V    LW++SG W+ Y A +  ++  D   + 
Sbjct: 46  GIRVLQKVENIIRQEMNKSGAQEVLMPIVQPAELWKESGRWNKYGAEL--LRFID---RH 100

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
            R F L P +      +    L+SY++LP+   +  + +R+E      G++R+R F   D
Sbjct: 101 QREFCLGPTHEEVITHLARQYLRSYKQLPMNFYQIQTKFRDEIRPRF-GVIRMREFIMKD 159

Query: 391 AHVFCTKEQMFNECLKI 407
           A+ F   E    E  ++
Sbjct: 160 AYSFHIDEASLQETYEV 176


>gi|307747462|gb|ADN90732.1| Prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni M1]
 gi|315931738|gb|EFV10693.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 327]
          Length = 568

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 68/143 (47%), Gaps = 7/143 (4%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I + GSG+  +   G ++   + + ++ ++ K   +E+N   +    LWQ+SG ++ +  
Sbjct: 32  IEQIGSGLYNFLPLGKRVLDKIKNIVKEEMDKAGAQEVNLSFITPASLWQESGRYNVFGK 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            +   K   +       F L P +    +++  + + SY++LP+ L + G  +R+E    
Sbjct: 92  ELLRFKDRKEN-----EFVLGPTHEEAMLSLVKNKITSYKQLPLHLYQIGLKFRDEARPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQ 399
             GL+R R F   D + F   E+
Sbjct: 147 F-GLLRCREFLMKDGYSFHANEE 168


>gi|110802427|ref|YP_698667.1| phosphoribulokinase / uridine kinase family protein [Clostridium
           perfringens SM101]
 gi|110682928|gb|ABG86298.1| phosphoribulokinase/uridine kinase family protein [Clostridium
           perfringens SM101]
          Length = 551

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 90/177 (50%), Gaps = 9/177 (5%)

Query: 26  VAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAEA 84
           + E I  +LAK+        K  + +D +  +G +E+I   DP        +   +  +A
Sbjct: 30  INEKIPITLAKQ------RNKYYEFTDLINNDGDVELINISDPHGKIAYSRTLQFVFIKA 83

Query: 85  VQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHE 144
              ++ E ++ I   I  G + +  KE+  + +++ +I++KMQEII ++    K  +  +
Sbjct: 84  TLDLFKEARINIEHSISKGTFGEIHKEKALNEEDILKIKRKMQEIINKNIIIEKIKMPKK 143

Query: 145 KARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLM 201
           +A ++F+S K   KV++L  +  ++ V LY+  + +D   G    STG + K+F L+
Sbjct: 144 EAIDIFKSYKMQDKVDLLHWV-QEDYVNLYKLEDRYDYFYGDMAYSTG-ILKYFDLL 198


>gi|325479231|gb|EGC82327.1| proline--tRNA ligase [Anaerococcus prevotii ACS-065-V-Col13]
          Length = 572

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/156 (23%), Positives = 73/156 (46%), Gaps = 10/156 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R      I +  SGV  +   G K+   + + +R  +++ D  E++T  
Sbjct: 17  DAETASHKYLTRGA---FIRKQASGVYSFLPLGKKVINKIEAIVRESMENHDSIEVSTSI 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +  + +W+ SG W+++   MF ++   +     R + L P        +  + L SY++L
Sbjct: 74  LQAKEIWETSGRWETFGPEMFKLEDRHN-----RQYCLGPTAEEAFTDLIKNELNSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           P+ + +    +R+E      G+ R R F   DA+ F
Sbjct: 129 PLNIYQIVDKFRDEKRPRF-GINRSRDFLMKDAYSF 163


>gi|213024165|ref|ZP_03338612.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. 404ty]
          Length = 194

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 54/112 (48%), Gaps = 6/112 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E++ P V    LWQ+SG W+ Y   +  ++  D   +  R F L P +      +  + L
Sbjct: 11  EVSMPVVQPADLWQESGRWEQYGPEL--LRFVD---RGERPFVLGPTHEEVITDLVRNEL 65

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
            SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 66  SSYKQLPLNFFQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHTSQESLQET 116


>gi|110633394|ref|YP_673602.1| prolyl-tRNA synthetase [Mesorhizobium sp. BNC1]
 gi|123162548|sp|Q11JI8|SYP_MESSB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|110284378|gb|ABG62437.1| prolyl-tRNA synthetase [Chelativorans sp. BNC1]
          Length = 442

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 41/156 (26%), Positives = 67/156 (42%), Gaps = 10/156 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+E   HR + R      I + G+G   W   G ++   +   +R  + +   +EI  P 
Sbjct: 17  EAEIVSHRLMLRSG---MIRQQGAGSFSWLPLGKRVLDKVCQIVREEQDRAGAQEILMPT 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW +SG ++ Y   M  ++   D     R     P N      +F   +KSY++L
Sbjct: 74  IQSADLWIESGRYNDYGKEMLRIRDRQD-----RAMLYGPTNEEMVTDIFRAYVKSYKDL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           P+ L      +R+E      G+MR R F   DA+ F
Sbjct: 129 PLNLYHIQWKFRDEVRPRF-GVMRSREFLMKDAYSF 163


>gi|153009317|ref|YP_001370532.1| alanyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188]
 gi|205830165|sp|A6X0E9|SYA_OCHA4 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|151561205|gb|ABS14703.1| alanyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188]
          Length = 885

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 63/128 (49%), Gaps = 12/128 (9%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++ EA++          G ++  D   +DF   +P S++EL Q+E    EII ++
Sbjct: 564 HSATHLLHEALRETLGSHVAQKGSLVAPDRLRFDFSHPKPISAEELTQVENLANEIILQN 623

Query: 134 SPFLKQYLS-----HEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF--DLCRGP 186
           +P   + ++      E A  LF  +K   +V ++    AK      ++G+ +  +LC G 
Sbjct: 624 APVSTRLMAVDDAIAEGAMALF-GEKYGDEVRVVSMGTAKHG---SKEGKAYSVELCGGT 679

Query: 187 HVRSTGQV 194
           HVR TG +
Sbjct: 680 HVRQTGDI 687


>gi|157736649|ref|YP_001489332.1| prolyl-tRNA synthetase [Arcobacter butzleri RM4018]
 gi|166980098|sp|A8ERT9|SYP_ARCB4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|157698503|gb|ABV66663.1| prolyl-tRNA synthetase [Arcobacter butzleri RM4018]
          Length = 568

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 79/172 (45%), Gaps = 15/172 (8%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRA 316
           IA+ G+G+  +   G  + + + + ++ ++ +    E+    V    LWQ+SG   +  A
Sbjct: 32  IAQTGAGIYDFMPLGKIVLEKIRAIVKEEMDEAGANEVQFGFVTPLTLWQESGRATTMGA 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M   K   +       F L P N    V +  + + SY++LP+ L +  + +R+E    
Sbjct: 92  EMLRFKDRKNG-----EFVLSPTNEEAVVNMVKNRITSYKDLPLHLYQINTKFRDEARPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLS 428
             GLMR R F   D + F + E+   + ++  NL+ + YK     KI  KL 
Sbjct: 147 F-GLMRGREFLMKDGYSFHSSEE---DLVREFNLMETTYK-----KIYTKLG 189


>gi|89268180|emb|CAJ81960.1| mitochondrial ribosomal protein L39 [Xenopus (Silurana) tropicalis]
          Length = 352

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/197 (24%), Positives = 94/197 (47%), Gaps = 24/197 (12%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT--PEDPRSL-AVIRHS 76
           +T    A  +S     ++V   ++G+V D+  P+ +  +I+ +T   EDP  +      S
Sbjct: 99  STPYHCALHLSEWYCSRSVLALVDGEVWDMYKPLTKSCNIQFLTFKDEDPEEVNKAYWRS 158

Query: 77  CAHIMAEAVQSIWPE------VQVAIGPIIEDGFYYD------FDKEQPFSSDELAQIEK 124
           CA I+   +++ + E      ++    P+I   F YD       D  +P + + L  + +
Sbjct: 159 CAMILGCVLENAFKEEYMVNLIRAPEIPVISGAFCYDVVLDSRLDDWRP-TEENLRSLTR 217

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN----VTLYRQGEWF 180
           +   +I +D PF    +  + A+E+F+     YK+ I+    A +N    VT++R G++ 
Sbjct: 218 EAHSLIHKDLPFESLEVEEKVAKEIFQ--HSPYKL-IMAEEKASQNPQGLVTVHRFGDFV 274

Query: 181 DLCRGPHVRSTGQVKKF 197
           DL  GPH+  T   +++
Sbjct: 275 DLTEGPHIPRTSFCQQY 291


>gi|311893995|dbj|BAJ26403.1| putative prolyl-tRNA synthetase [Kitasatospora setae KM-6054]
          Length = 556

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 56/124 (45%), Gaps = 9/124 (7%)

Query: 288 KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
           ++ +  +  P +  + LW++SG W  Y A    V     T        L P +     A 
Sbjct: 70  RNGFNSLALPTLQSRTLWEESGRWKVYTAEGALVT----TRVGGADMCLAPTSEEMATAT 125

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNE--PSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
               L+S+R+LPVRL    + +R+E  P G   GLMR R FT  DA+ F        E +
Sbjct: 126 VRSHLRSHRDLPVRLTLNTTKFRDELSPRG---GLMRGREFTMADAYTFDPDRAGMLESV 182

Query: 406 KIHN 409
           ++ N
Sbjct: 183 RLLN 186


>gi|227514714|ref|ZP_03944763.1| proline--tRNA ligase [Lactobacillus fermentum ATCC 14931]
 gi|227086918|gb|EEI22230.1| proline--tRNA ligase [Lactobacillus fermentum ATCC 14931]
          Length = 581

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/185 (20%), Positives = 90/185 (48%), Gaps = 14/185 (7%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E   H+ + R   ++ ++   +GV  +    +++ + +   +R ++ K    E+  P 
Sbjct: 25  DAEVLSHKMMVRAGYIYQVS---AGVWAYLPLAYRVIRKIEQIIREEMDKAGAVEMLLPG 81

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L   LW++SG +++Y  N+F +K   +     R F L P +     ++    + SY++L
Sbjct: 82  LLPADLWKESGRYEAYGDNLFKLKDRRE-----RDFILGPTHEETVTSILRDAIHSYKKL 136

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+ + +    YR+E     +G++R + F   D + F   +   ++    ++L    Y++ 
Sbjct: 137 PLVVYQLQDKYRDEDR-PRYGILRGKEFEMLDGYSFSADQAGLDQA---YDLQAKAYRNI 192

Query: 419 GFEKI 423
            F++I
Sbjct: 193 -FDRI 196


>gi|227495079|ref|ZP_03925395.1| proline--tRNA ligase [Actinomyces coleocanis DSM 15436]
 gi|226831531|gb|EEH63914.1| proline--tRNA ligase [Actinomyces coleocanis DSM 15436]
          Length = 603

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 42/187 (22%), Positives = 81/187 (43%), Gaps = 11/187 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R     +I     G+  W   G ++ + +   +R ++     +E++ P 
Sbjct: 19  DAEVTSHKLLVRA---GYIRRTAPGIYTWLPLGLQVLKRIEKVVREEMDAVGAQEVHFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L    +Q++  W+ Y   +F  K  D    D   + L P +      +      SY++L
Sbjct: 76  LLPAEPYQKTNRWEEYGPTLF--KLRDRKAAD---YLLAPTHEEMFTLLVKDMYSSYKDL 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS-IYKD 417
           PV L +  + YR+E +    GL+R R F   DA+ F   ++  N    +       I++ 
Sbjct: 131 PVTLYQIQTKYRDE-ARPRAGLIRGREFVMKDAYSFDIDQEGLNTSYDLQRQAYQRIFER 189

Query: 418 FGFEKIM 424
            G E ++
Sbjct: 190 LGLEYVI 196


>gi|228919324|ref|ZP_04082694.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228840431|gb|EEM85702.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 502

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 92/446 (20%), Positives = 172/446 (38%), Gaps = 62/446 (13%)

Query: 214 RPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGW 273
           R  L  + G      +E  Q +  +EE   + +  + ++ +L   +    G +     G+
Sbjct: 14  RAFLYFLEGGRLTMAKEQVQAITKMEEDFAQWYTDIVKKAELVDYS-SVKGCMILRPYGY 72

Query: 274 KIFQTLISYMRRKIKDD-YEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDL 331
            +++ +   M  K+K   +E +  P  + + L Q +  H + +   +  V    D  K  
Sbjct: 73  ALWENMQKVMDEKLKGTGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGDE-KLA 131

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
               ++P +       F+  ++SY +LP    ++ SV R E +      +R   F   + 
Sbjct: 132 ERLCVRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKT--TRPFLRTTEFLWQEG 189

Query: 392 H-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKG 450
           H +  T E+   E L I NL  S  +D+    ++    T  EK  G+ A +         
Sbjct: 190 HTIHETAEESQAETLNILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKATY--------- 240

Query: 451 VLDTIKNSSQD--RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
              TI++   D   + TG     G  +   F+    D  G+ WQ                
Sbjct: 241 ---TIESLMHDGKALQTGTSHNFGTNFSEAFDIKFLDRNGK-WQ---------------- 280

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTITSSA 564
                         +H+  +G   R IG +I     N    +P  ++P+Q ++  I    
Sbjct: 281 -------------YVHQTSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQVVIVPIAQHK 327

Query: 565 VEYAQEIANLLKSH---HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
            E     A  L++H      ++ D  N+T  +K  E+ +K IPI +  G K+  ++ + +
Sbjct: 328 -EGVLAKATELQAHIQKVARVKIDASNKTPGWKFNEYEMKGIPIRLEVGPKDIEKKQVVL 386

Query: 622 RRFGSTTTQKV---SLLDAIPILTKE 644
            R  +   + V    L + IP L +E
Sbjct: 387 VRRDTKEKEFVPMDQLEERIPALLEE 412


>gi|217969648|ref|YP_002354882.1| prolyl-tRNA synthetase [Thauera sp. MZ1T]
 gi|217506975|gb|ACK53986.1| prolyl-tRNA synthetase [Thauera sp. MZ1T]
          Length = 582

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 57/124 (45%), Gaps = 9/124 (7%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P V    LW ++G WD     +   K      +  R FAL+P +      +    L
Sbjct: 68  ELIMPMVQPAELWDETGRWDKMGDELLRFKD-----RHERDFALQPTSEEVVTDIARQEL 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
           KSYR+LP    +  + +R+E      G+MR R FT  DA+ F   E+      + ++++ 
Sbjct: 123 KSYRQLPKNFYQIQTKFRDERRPRF-GVMRGREFTMKDAYSFDRSEEAAG---RSYDIMF 178

Query: 413 SIYK 416
           + YK
Sbjct: 179 AAYK 182


>gi|167005199|ref|ZP_02270957.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176]
          Length = 568

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/139 (24%), Positives = 68/139 (48%), Gaps = 7/139 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           GSG+  +   G ++   + + ++ ++ K   +E+N   +    LWQ+SG ++ +   +  
Sbjct: 36  GSGLYNFLPLGKRVLDKIKNIVKEEMDKAGAQEVNLSFITPASLWQESGRYNVFGKELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            K   D  K+   F L P +    +++  + + SY++LP+ L + G  +R+E      GL
Sbjct: 96  FK---DRKKN--EFVLGPTHEEAMLSLVKNKITSYKQLPLHLYQIGLKFRDEARPRF-GL 149

Query: 381 MRVRGFTQDDAHVFCTKEQ 399
           +R R F   D + F   E+
Sbjct: 150 LRCREFLMKDGYSFHANEE 168


>gi|121612398|ref|YP_001000243.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176]
 gi|152016593|sp|A1VYQ2|SYP_CAMJJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|87250412|gb|EAQ73370.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176]
          Length = 569

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/139 (24%), Positives = 68/139 (48%), Gaps = 7/139 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           GSG+  +   G ++   + + ++ ++ K   +E+N   +    LWQ+SG ++ +   +  
Sbjct: 37  GSGLYNFLPLGKRVLDKIKNIVKEEMDKAGAQEVNLSFITPASLWQESGRYNVFGKELLR 96

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            K   D  K+   F L P +    +++  + + SY++LP+ L + G  +R+E      GL
Sbjct: 97  FK---DRKKN--EFVLGPTHEEAMLSLVKNKITSYKQLPLHLYQIGLKFRDEARPRF-GL 150

Query: 381 MRVRGFTQDDAHVFCTKEQ 399
           +R R F   D + F   E+
Sbjct: 151 LRCREFLMKDGYSFHANEE 169


>gi|257792203|ref|YP_003182809.1| prolyl-tRNA synthetase [Eggerthella lenta DSM 2243]
 gi|257476100|gb|ACV56420.1| prolyl-tRNA synthetase [Eggerthella lenta DSM 2243]
          Length = 578

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 71/156 (45%), Gaps = 10/156 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   HR L R      I +  SGV  +   G ++   + + +R ++     +EI  P 
Sbjct: 17  DAEIASHRLLLRA---GFIRKTASGVYTFLPLGKRVLAKVENIVREEMDGIGAQEIMMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW +SG W+ Y   +  +    D     R F L P +     ++  + L+SY+EL
Sbjct: 74  LQPGELWHESGRWNDYGPELMRLVDRHD-----REFCLGPTHEELITSLVRNELRSYKEL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           P+ L +    +R+E      GL+R R F   DA+ F
Sbjct: 129 PLSLYQIQVKFRDEIRPRF-GLLRSREFIMKDAYSF 163


>gi|296129352|ref|YP_003636602.1| prolyl-tRNA synthetase [Cellulomonas flavigena DSM 20109]
 gi|296021167|gb|ADG74403.1| prolyl-tRNA synthetase [Cellulomonas flavigena DSM 20109]
          Length = 597

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 45/196 (22%), Positives = 84/196 (42%), Gaps = 19/196 (9%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   HR L R     +I     G+  W   G ++   +   +R ++     +E++ P 
Sbjct: 19  DAEVASHRLLVRAG---YIRRAAPGIYTWLPLGLRVLAKVEQVVREEMAAIGAQEVHFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L +  ++ +G W  Y  N+F +K  D    D        +  P H  +F   +K    S
Sbjct: 76  LLPKEPYEATGRWTEYGPNIFRLK--DRKGGDY-------LLAPTHEEMFTLLVKDLYSS 126

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS- 413
           Y++LP+ L +  + YR+E +    GL+R R F   DA+ F   +       +        
Sbjct: 127 YKDLPLALYQIQTKYRDE-ARPRAGLIRGREFVMKDAYSFDVDDAGLAASYEAQRAAYQR 185

Query: 414 IYKDFGFEKIMVKLST 429
           I+   G E ++V  ++
Sbjct: 186 IFDRLGLEYVIVAATS 201


>gi|157414824|ref|YP_001482080.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81116]
 gi|172047085|sp|A8FKW6|SYP_CAMJ8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|157385788|gb|ABV52103.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81116]
          Length = 568

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 68/143 (47%), Gaps = 7/143 (4%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I + GSG+  +   G ++   + + ++ ++ K   +E+N   +    LWQ+SG ++ +  
Sbjct: 32  IEQIGSGLYNFLPLGKRVLDKIKNIVKEEMDKAGAQEVNLSFITPASLWQESGRYNVFGK 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            +   K   +       F L P +    +++  + + SY++LP+ L + G  +R+E    
Sbjct: 92  ELLRFKDRKEN-----EFVLGPTHEEAMLSLVKNKITSYKQLPLHLYQIGLKFRDEARPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQ 399
             GL+R R F   D + F   E+
Sbjct: 147 F-GLLRCREFLMKDGYSFHANEE 168


>gi|57167588|ref|ZP_00366728.1| prolyl-tRNA synthetase [Campylobacter coli RM2228]
 gi|57020710|gb|EAL57374.1| prolyl-tRNA synthetase [Campylobacter coli RM2228]
          Length = 569

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/139 (23%), Positives = 66/139 (47%), Gaps = 7/139 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           GSG+  +   G ++   + + ++ ++ K   +E+N   V    LWQ+SG ++ +   +  
Sbjct: 37  GSGLYNFLPLGKRVLDKIRTIVKEEMDKAGAQEVNLSFVTPATLWQESGRYNVFGKELLR 96

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            K   +       F L P +    +++  + + SY++LP+ L + G  +R+E      GL
Sbjct: 97  FKDRKEN-----DFVLGPTHEEAMLSLVKNKITSYKQLPLHLYQIGLKFRDEARPRF-GL 150

Query: 381 MRVRGFTQDDAHVFCTKEQ 399
           +R R F   D + F   E+
Sbjct: 151 LRCREFLMKDGYSFHANEE 169


>gi|317490123|ref|ZP_07948612.1| prolyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA]
 gi|325833438|ref|ZP_08165887.1| proline--tRNA ligase [Eggerthella sp. HGA1]
 gi|316910828|gb|EFV32448.1| prolyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA]
 gi|325485362|gb|EGC87831.1| proline--tRNA ligase [Eggerthella sp. HGA1]
          Length = 584

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 71/156 (45%), Gaps = 10/156 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   HR L R      I +  SGV  +   G ++   + + +R ++     +EI  P 
Sbjct: 23  DAEIASHRLLLRA---GFIRKTASGVYTFLPLGKRVLAKVENIVREEMDGIGAQEIMMPA 79

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW +SG W+ Y   +  +    D     R F L P +     ++  + L+SY+EL
Sbjct: 80  LQPGELWHESGRWNDYGPELMRLVDRHD-----REFCLGPTHEELITSLVRNELRSYKEL 134

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           P+ L +    +R+E      GL+R R F   DA+ F
Sbjct: 135 PLSLYQIQVKFRDEIRPRF-GLLRSREFIMKDAYSF 169


>gi|315635814|ref|ZP_07891076.1| proline--tRNA ligase [Arcobacter butzleri JV22]
 gi|315479793|gb|EFU70464.1| proline--tRNA ligase [Arcobacter butzleri JV22]
          Length = 568

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 79/172 (45%), Gaps = 15/172 (8%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRA 316
           IA+ G+G+  +   G  + + + + ++ ++ +    E+    V    LWQ+SG   +  A
Sbjct: 32  IAQTGAGIYDFMPLGKIVLEKIRTIVKEEMDEAGANEVQFGFVTPLTLWQESGRATTMGA 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M   K   +       F L P N    V +  + + SY++LP+ L +  + +R+E    
Sbjct: 92  EMLRFKDRKNG-----EFVLSPTNEEAVVNMVKNRITSYKDLPLHLYQINTKFRDEARPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLS 428
             GLMR R F   D + F + E+   + ++  NL+ + YK     KI  KL 
Sbjct: 147 F-GLMRGREFLMKDGYSFHSSEE---DLVREFNLMEATYK-----KIYTKLG 189


>gi|260548877|ref|ZP_05823099.1| prolyl-tRNA synthetase [Acinetobacter sp. RUH2624]
 gi|260408045|gb|EEX01516.1| prolyl-tRNA synthetase [Acinetobacter sp. RUH2624]
          Length = 571

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/147 (23%), Positives = 65/147 (44%), Gaps = 7/147 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E+  P      LW++SG ++ Y   +  
Sbjct: 36  ASGLYTWLPMGTRVLKKVDAIVREEMNRSGAMEVFMPVTQPASLWEESGRYEQYGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            K   D       F L P +      +  + LKSY++LPV   +  + +R+E      G+
Sbjct: 96  FKDRHDN-----PFVLGPTHEEVITDLARNELKSYKQLPVNFYQIQTKFRDEIRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKI 407
           MR R F   DA+ F   ++   E   +
Sbjct: 150 MRSREFIMKDAYSFHATQESLQETYDV 176


>gi|195378436|ref|XP_002047990.1| GJ13727 [Drosophila virilis]
 gi|194155148|gb|EDW70332.1| GJ13727 [Drosophila virilis]
          Length = 332

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 66/258 (25%), Positives = 115/258 (44%), Gaps = 32/258 (12%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVC-DLSDPVREG-S 58
           +P D+ L   +     F       + A+ +S    K++    ++G V  D+  P++E  +
Sbjct: 64  LPEDVTLIMNNNISTPF-------NCAQHLSEGHCKRSALALVDGSVPWDMHRPLQESCT 116

Query: 59  IEIITPEDPRSLAVIR---HSCAHIMAEAVQSIW-PEVQVAI----GPIIEDG-FYYDFD 109
           ++++         V +    +C+ ++  A+Q  +  E  + +    GP I+ G F +D  
Sbjct: 117 LQLLNFNISEPHVVNKAFWRTCSFMLGAALQRAFRQEANLQLHSFPGPNIKSGSFVHDIV 176

Query: 110 ---KEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIP 166
              +    +  E+  I  +M ++ A+D    +  + HE A+E+F+  +  YK E L SI 
Sbjct: 177 LGVQNWVPTKAEMRAISAEMVKLAAQDLRIERLEVDHELAKEMFKDSR--YKSEQLPSI- 233

Query: 167 AKEN---VTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAY-WRGDSNRPMLSRIYG 222
           A++N   VTLYR GE  D+ RGP V ST    +F     V+ A+    +       RI G
Sbjct: 234 AQQNQSRVTLYRLGEHIDISRGPMVAST----RFLGKCTVSAAHKLANEGPSSAFYRIQG 289

Query: 223 TAWNTQQELTQYLYFLEE 240
            A      L    Y L E
Sbjct: 290 VALPIGFALNHLAYGLLE 307


>gi|188993111|ref|YP_001905121.1| prolyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           B100]
 gi|226701356|sp|B0RVJ2|SYP_XANCB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|167734871|emb|CAP53083.1| unnamed protein product [Xanthomonas campestris pv. campestris]
          Length = 564

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 44/202 (21%), Positives = 84/202 (41%), Gaps = 14/202 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E   HR + R   +  +A   SG+  W   G ++ + + + +R ++ +    E+  P 
Sbjct: 17  DAELVSHRLMLRAGMIRKLA---SGLYTWSPLGLRVLRKVEAIVREEMNRAGAVEVLFPT 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +  + LW  +G W+ +   +  +K   +     + F   P             + SY++L
Sbjct: 74  IQPRELWDATGRWEKFGGQLLKIKDRKE-----QEFCYTPTAEEAAAEFARQEINSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKD 417
           P+   +  + +R+E      G+MR R F   DA+ F  T   M  E   +    I I+  
Sbjct: 129 PLNFYQIQTKFRDEIRPRF-GVMRAREFLMKDAYSFHLTDADMAREYDNMRAAYIRIFTR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDA 439
            G E   V+  +     +G DA
Sbjct: 188 LGLEFRAVQADS---GAIGGDA 206


>gi|239832092|ref|ZP_04680421.1| alanyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301]
 gi|239824359|gb|EEQ95927.1| alanyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301]
          Length = 885

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 64/128 (50%), Gaps = 12/128 (9%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++ EA++          G ++  D   +DF   +P S++ELA++E    EII ++
Sbjct: 564 HSATHLLHEALRETLGSHVAQKGSLVAPDRLRFDFSHPKPISAEELAKVENLANEIILQN 623

Query: 134 SPFLKQYLS-----HEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF--DLCRGP 186
           +P   + ++      E A  LF  +K   +V ++    AK      ++G+ +  +LC G 
Sbjct: 624 APVSTRLMAVDDAIAEGAMALF-GEKYGDEVRVVSMGTAKHG---SKEGKAYSVELCGGT 679

Query: 187 HVRSTGQV 194
           HVR TG +
Sbjct: 680 HVRQTGDI 687


>gi|21230114|ref|NP_636031.1| prolyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
 gi|66769896|ref|YP_244658.1| prolyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           8004]
 gi|81304150|sp|Q4UQN5|SYP_XANC8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|81860394|sp|Q8PCS4|SYP_XANCP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|21111643|gb|AAM39955.1| prolyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
 gi|66575228|gb|AAY50638.1| prolyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           8004]
          Length = 564

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 44/202 (21%), Positives = 84/202 (41%), Gaps = 14/202 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E   HR + R   +  +A   SG+  W   G ++ + + + +R ++ +    E+  P 
Sbjct: 17  DAELVSHRLMLRAGMIRKLA---SGLYTWSPLGLRVLRKVEAIVREEMNRAGAVEVLFPT 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +  + LW  +G W+ +   +  +K   +     + F   P             + SY++L
Sbjct: 74  IQPRELWDATGRWEKFGGQLLKIKDRKE-----QEFCYTPTAEEAAAEFARQEINSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKD 417
           P+   +  + +R+E      G+MR R F   DA+ F  T   M  E   +    I I+  
Sbjct: 129 PLNFYQIQTKFRDEIRPRF-GVMRAREFLMKDAYSFHLTDADMAREYDNMRAAYIRIFTR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDA 439
            G E   V+  +     +G DA
Sbjct: 188 LGLEFRAVQADS---GAIGGDA 206


>gi|297571190|ref|YP_003696964.1| prolyl-tRNA synthetase [Arcanobacterium haemolyticum DSM 20595]
 gi|296931537|gb|ADH92345.1| prolyl-tRNA synthetase [Arcanobacterium haemolyticum DSM 20595]
          Length = 595

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 40/160 (25%), Positives = 75/160 (46%), Gaps = 18/160 (11%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E R H+ L R     ++     G+  W   G K+ + + + +R ++     +E++ P 
Sbjct: 15  DAEVRSHKLLVRAG---YVRRAAPGIYTWLPLGLKVLRKVEAVVREEMDAAGSQEMHFPA 71

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L +  ++ +  W+ Y  N+F        +KD R      +  P H  +F   +K    S
Sbjct: 72  LLPREPYEATNRWEEYGPNLF-------RLKDRRENDY--LLAPTHEEMFTLAVKDMYSS 122

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           Y++LPV L +    YR+E +    G++R R F   DA+ F
Sbjct: 123 YKDLPVSLYQIQHKYRDE-ARPRAGIIRTREFIMKDAYSF 161


>gi|269467800|gb|EEZ79555.1| prolyl-tRNA synthetase [uncultured SUP05 cluster bacterium]
          Length = 560

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/170 (22%), Positives = 74/170 (43%), Gaps = 16/170 (9%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I++  SG+  +   G ++ + + + +R ++ K   +E+  P      LWQ+SG W+ Y  
Sbjct: 32  ISKLASGLYSYLPMGLRVLKKVEAIIREEMNKSGAQEVLMPVAQPAELWQESGRWEQYGP 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH----GLKSYRELPVRLAEFGSVYRNE 372
            +       +     R F L P     H  V  H     ++SY++LP+   +  + +R+E
Sbjct: 92  ELLRFNDRHN-----RKFCLGPT----HEEVITHLAAQYIRSYKQLPMNFYQIQTKFRDE 142

Query: 373 PSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI-HNLIISIYKDFGFE 421
                 G+MR R F   DA+ F   +    +   + H    +I+   G +
Sbjct: 143 IRPRF-GVMRSREFIMKDAYSFHLDQNSLQQTFDVMHQTYCNIFNRLGLD 191


>gi|297539468|ref|YP_003675237.1| prolyl-tRNA synthetase [Methylotenera sp. 301]
 gi|297258815|gb|ADI30660.1| prolyl-tRNA synthetase [Methylotenera sp. 301]
          Length = 573

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/136 (25%), Positives = 63/136 (46%), Gaps = 7/136 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           GSG+  W   G ++ + + + +R ++ K    E+  P V  + LW ++G W  +   M  
Sbjct: 36  GSGLYSWMPLGLRVLRKVETIVRDEMNKAGALELLMPAVQPRELWDETGRWAVFGPQMLK 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +     T +  R F   P +      +    ++SY++LP+   +  + +R+E      G+
Sbjct: 96  I-----TDRHSREFCFGPTHEEVITDIARSEVRSYKQLPLNFYQIQTKFRDEIRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCT 396
           MR R F   DA+ F T
Sbjct: 150 MRAREFMMKDAYSFHT 165


>gi|184159387|ref|YP_001847726.1| prolyl-tRNA synthetase [Acinetobacter baumannii ACICU]
 gi|239501767|ref|ZP_04661077.1| prolyl-tRNA synthetase [Acinetobacter baumannii AB900]
 gi|332876227|ref|ZP_08444002.1| proline--tRNA ligase [Acinetobacter baumannii 6014059]
 gi|226695842|sp|B2HY33|SYP_ACIBC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226731481|sp|A3M8I1|SYP_ACIBT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|183210981|gb|ACC58379.1| Prolyl-tRNA synthetase [Acinetobacter baumannii ACICU]
 gi|193078264|gb|ABO13225.2| prolyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978]
 gi|322509299|gb|ADX04753.1| proS [Acinetobacter baumannii 1656-2]
 gi|323519326|gb|ADX93707.1| prolyl-tRNA synthetase [Acinetobacter baumannii TCDC-AB0715]
 gi|332735499|gb|EGJ66551.1| proline--tRNA ligase [Acinetobacter baumannii 6014059]
          Length = 571

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/147 (23%), Positives = 65/147 (44%), Gaps = 7/147 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E+  P      LW++SG ++ Y   +  
Sbjct: 36  ASGLYTWLPMGTRVLKKVDAIVREEMNRSGAMEVFMPVTQPASLWEESGRYEQYGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            K   D       F L P +      +  + LKSY++LPV   +  + +R+E      G+
Sbjct: 96  FKDRHDN-----PFVLGPTHEEVITDLARNELKSYKQLPVNFYQIQTKFRDEIRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKI 407
           MR R F   DA+ F   ++   E   +
Sbjct: 150 MRSREFIMKDAYSFHATQESLQETYDV 176


>gi|163795649|ref|ZP_02189615.1| Prolyl-tRNA synthetase [alpha proteobacterium BAL199]
 gi|159179248|gb|EDP63781.1| Prolyl-tRNA synthetase [alpha proteobacterium BAL199]
          Length = 437

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 68/156 (43%), Gaps = 10/156 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           ++E   HR + R      I +  +G+  W   G ++ + +   +R  +    ++E+  P 
Sbjct: 17  DAEIVSHRLMLRAG---MIQQASAGIYSWLPLGLRVLKKIEQVVREEQDAAGWQEVLMPT 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW++SG +D Y   M  +K   D     R     P N      +F   ++SY+ L
Sbjct: 74  IQSADLWRESGRYDDYGKEMLRIKDRHD-----RDMLFGPTNEEVITDIFRTHVRSYKAL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           P RL      +R+E      G+MR R F   DA+ F
Sbjct: 129 PGRLYHIQWKFRDEVRPRF-GVMRGREFLMKDAYSF 163


>gi|260557205|ref|ZP_05829421.1| prolyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606]
 gi|260409311|gb|EEX02613.1| prolyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606]
          Length = 571

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/147 (23%), Positives = 65/147 (44%), Gaps = 7/147 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E+  P      LW++SG ++ Y   +  
Sbjct: 36  ASGLYTWLPMGTRVLKKVDAIVREEMNRSGAMEVFMPVTQPASLWEESGRYEQYGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            K   D       F L P +      +  + LKSY++LPV   +  + +R+E      G+
Sbjct: 96  FKDRHDN-----PFVLGPTHEEVITDLARNELKSYKQLPVNFYQIQTKFRDEIRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKI 407
           MR R F   DA+ F   ++   E   +
Sbjct: 150 MRSREFIMKDAYSFHATQESLQETYDV 176


>gi|169794838|ref|YP_001712631.1| prolyl-tRNA synthetase [Acinetobacter baumannii AYE]
 gi|213157835|ref|YP_002320633.1| prolyl-tRNA synthetase [Acinetobacter baumannii AB0057]
 gi|215482385|ref|YP_002324567.1| prolyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
 gi|301345755|ref|ZP_07226496.1| prolyl-tRNA synthetase [Acinetobacter baumannii AB056]
 gi|301511535|ref|ZP_07236772.1| prolyl-tRNA synthetase [Acinetobacter baumannii AB058]
 gi|301594855|ref|ZP_07239863.1| prolyl-tRNA synthetase [Acinetobacter baumannii AB059]
 gi|332852292|ref|ZP_08434097.1| proline--tRNA ligase [Acinetobacter baumannii 6013150]
 gi|332870515|ref|ZP_08439279.1| proline--tRNA ligase [Acinetobacter baumannii 6013113]
 gi|226695840|sp|B7GWV6|SYP_ACIB3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226695841|sp|B7I854|SYP_ACIB5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226731418|sp|B0V4Y6|SYP_ACIBY RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|169147765|emb|CAM85628.1| prolyl-tRNA synthetase [Acinetobacter baumannii AYE]
 gi|213056995|gb|ACJ41897.1| prolyl-tRNA synthetase [Acinetobacter baumannii AB0057]
 gi|213986493|gb|ACJ56792.1| prolyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
 gi|332729422|gb|EGJ60762.1| proline--tRNA ligase [Acinetobacter baumannii 6013150]
 gi|332732252|gb|EGJ63520.1| proline--tRNA ligase [Acinetobacter baumannii 6013113]
          Length = 571

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/147 (23%), Positives = 65/147 (44%), Gaps = 7/147 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E+  P      LW++SG ++ Y   +  
Sbjct: 36  ASGLYTWLPMGTRVLKKVDAIVREEMNRSGAMEVFMPVTQPASLWEESGRYEQYGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            K   D       F L P +      +  + LKSY++LPV   +  + +R+E      G+
Sbjct: 96  FKDRHDN-----PFVLGPTHEEVITDLARNELKSYKQLPVNFYQIQTKFRDEIRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKI 407
           MR R F   DA+ F   ++   E   +
Sbjct: 150 MRSREFIMKDAYSFHATQESLQETYDV 176


>gi|126642843|ref|YP_001085827.1| prolyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978]
          Length = 546

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 65/146 (44%), Gaps = 7/146 (4%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG+  W   G ++ + + + +R ++ +    E+  P      LW++SG ++ Y   +   
Sbjct: 12  SGLYTWLPMGTRVLKKVDAIVREEMNRSGAMEVFMPVTQPASLWEESGRYEQYGPELLRF 71

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           K   D       F L P +      +  + LKSY++LPV   +  + +R+E      G+M
Sbjct: 72  KDRHDN-----PFVLGPTHEEVITDLARNELKSYKQLPVNFYQIQTKFRDEIRPRF-GVM 125

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLKI 407
           R R F   DA+ F   ++   E   +
Sbjct: 126 RSREFIMKDAYSFHATQESLQETYDV 151


>gi|269214916|ref|ZP_05987412.2| proline--tRNA ligase [Neisseria lactamica ATCC 23970]
 gi|269208774|gb|EEZ75229.1| proline--tRNA ligase [Neisseria lactamica ATCC 23970]
          Length = 625

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 63/139 (45%), Gaps = 9/139 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I  + SG+  W   G ++ + + + +R ++ +    E+  P V    LWQ+SG W  Y  
Sbjct: 87  IKANASGLYTWMPMGLRVLRKVENVVREEMARAGSVELLMPVVQPAELWQESGRWKFYGK 146

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVA-VFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            +  +K   D     R F + P  C   +A +    + SY++LP       + +R+E   
Sbjct: 147 ELLRLKDRHD-----RDFCMGP-TCEEVIADIVRKEVNSYKQLPKNFYHIQTKFRDEVRP 200

Query: 376 SLHGLMRVRGFTQDDAHVF 394
              G+MR R F   DA+ F
Sbjct: 201 RF-GVMRAREFVMKDAYSF 218


>gi|225874389|ref|YP_002755848.1| proline--tRNA ligase [Acidobacterium capsulatum ATCC 51196]
 gi|254782879|sp|C1F3P3|SYP_ACIC5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|225793232|gb|ACO33322.1| proline--tRNA ligase [Acidobacterium capsulatum ATCC 51196]
          Length = 585

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 45/206 (21%), Positives = 90/206 (43%), Gaps = 24/206 (11%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQV 299
           ++E   H+ L R     +I + G+G+  +   G +    ++  +R ++    +E   P +
Sbjct: 18  DAEVASHKFLLRS---GYIRQLGAGIYSYLLFGQRSINKIVGIVREEMDKIGQEFLLPAI 74

Query: 300 LDQHLWQQSGHWDSYRANMFAVK-------CADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
               LW++SG W     NMF +K       C   T +++ T             +  + L
Sbjct: 75  HPADLWRESGRWTVMGDNMFRLKDRKGAELCLGMTHEEVMT------------DIARNEL 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
           +SY++LP    +  + +R+EP     GL+RVR F   D++ F   +   ++   +H+   
Sbjct: 123 RSYKQLPQIWYQIQNKFRDEPR-PRSGLLRVRQFLMKDSYSFDLNQAGLDKSYDLHDAAY 181

Query: 413 -SIYKDFGFEKIMVKLSTRPEKRVGS 437
            +I+   G   ++V+  +      GS
Sbjct: 182 RAIFTRCGLNFVVVEADSGAMGGSGS 207


>gi|319426918|gb|ADV54992.1| prolyl-tRNA synthetase [Shewanella putrefaciens 200]
          Length = 571

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/148 (25%), Positives = 65/148 (43%), Gaps = 7/148 (4%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I  + SG+  +   G ++ + + + +R ++ K    EI  P V    LW ++G WD +  
Sbjct: 32  IRRNASGLYSYLPTGLRVLRKVEAIVREEMNKAGAIEILMPMVQPADLWVETGRWDKFGP 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            +   K   +     R F L P +      +    + SY++LP+ L +  + +R+E    
Sbjct: 92  ELLRFKDRHN-----RDFVLGPTHEEVITDLIRKEVSSYKQLPLNLYQIQTKFRDEVRPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             G+MR R F   DA+ F       NE 
Sbjct: 147 F-GMMRSREFLMKDAYSFHLDVDTMNEA 173


>gi|307822387|ref|ZP_07652619.1| prolyl-tRNA synthetase [Methylobacter tundripaludum SV96]
 gi|307736953|gb|EFO07798.1| prolyl-tRNA synthetase [Methylobacter tundripaludum SV96]
          Length = 569

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/160 (23%), Positives = 70/160 (43%), Gaps = 8/160 (5%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           +G+  W   G ++ + +    R ++ K    E+  P +    LWQ++G W+ Y   +  +
Sbjct: 37  AGLYTWLPLGLRVMRKVEKITREEMEKTGALEVLMPGLQPAELWQETGRWEQYGPELARL 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           K   D     R F L P +      +  + +KSY++LP+   +  S +R+E      G+M
Sbjct: 97  KDRHD-----RDFCLGPTHEEIITDLARNEIKSYKQLPITYYQIQSKFRDEIRPRF-GVM 150

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDFGF 420
           R R F   DA+ F    +      + +H    +I+   G 
Sbjct: 151 RSREFIMKDAYSFHLDHESLQVTYEAMHQAYTNIFNHLGL 190


>gi|283954167|ref|ZP_06371692.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414]
 gi|283794446|gb|EFC33190.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414]
          Length = 568

 Score = 51.6 bits (122), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/139 (23%), Positives = 66/139 (47%), Gaps = 7/139 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           GSG+  +   G ++   + + ++ ++ K   +E+N   +    LWQ+SG ++ +   +  
Sbjct: 36  GSGLYNFLPLGKRVLDKIKNIVKEEMDKAGAQEVNLSFITPASLWQESGRYNVFGKELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            K   +       F L P +    +++  + + SY++LP+ L + G  +R+E      GL
Sbjct: 96  FKDRKEN-----EFVLGPTHEEAMLSLVKNKITSYKQLPLHLYQIGLKFRDEARPRF-GL 149

Query: 381 MRVRGFTQDDAHVFCTKEQ 399
           +R R F   D + F   E+
Sbjct: 150 LRCREFLMKDGYSFHANEE 168


>gi|218895513|ref|YP_002443924.1| prolyl-tRNA synthetase [Bacillus cereus G9842]
 gi|228899114|ref|ZP_04063386.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis IBL 4222]
 gi|218542506|gb|ACK94900.1| prolyl-tRNA synthetase [Bacillus cereus G9842]
 gi|228860555|gb|EEN04943.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis IBL 4222]
          Length = 476

 Score = 51.6 bits (122), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 84/396 (21%), Positives = 153/396 (38%), Gaps = 61/396 (15%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHLWQ-QSGHWDSYRANMFAV 321
           G +     G+ +++ +   M  K+K+  +E +  P  + + L Q +  H + +   +  V
Sbjct: 37  GCMILRPYGYALWENMQKVMDEKLKETGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWV 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
               D  K      ++P +       F+  ++SY +LP    ++ SV R E +      +
Sbjct: 97  THGGDE-KLAERLCVRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKT--TRPFL 153

Query: 382 RVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           R   F   + H +  T E+   E L I NL  S  +D+    ++    T  EK  G+ A 
Sbjct: 154 RTTEFLWQEGHTIHETAEESQAETLNILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKAT 213

Query: 441 WDDAENIMKGVLDTIKNSSQD--RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
           +            TI++   D   + TG     G  +   F+    D  G+ WQ      
Sbjct: 214 Y------------TIESLMHDGKALQTGTSHNFGTNFSEAFDIKFLDRNGK-WQ------ 254

Query: 499 DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQ 554
                                   +H+  +G   R IG +I     N    +P  ++P+Q
Sbjct: 255 -----------------------YVHQTSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQ 291

Query: 555 AIVTTITSSAVEYAQEIANLLKSH---HLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
            ++  I     E     A  L+ H      ++ D  N+T  +K  E+ +K IPI +  G 
Sbjct: 292 VVIVPIAQHK-EGVLAKATELQGHIQKVARVKIDASNKTPGWKFNEYEMKGIPIRLEVGP 350

Query: 612 KEASERSIGIRRFGSTTTQKVS---LLDAIPILTKE 644
           K+  +  + + R  +   + +S   L + IP L +E
Sbjct: 351 KDIEKNQVVLVRRDTKEKEFISMDQLEERIPALLEE 386


>gi|118415374|gb|ABK83793.1| prolyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
          Length = 502

 Score = 51.6 bits (122), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 92/448 (20%), Positives = 171/448 (38%), Gaps = 62/448 (13%)

Query: 212 SNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRK 271
             R  L  + G      +E  Q +  +EE   + +  + ++ +L   +    G +     
Sbjct: 12  GTRAFLYFLEGGRLTMAKEQVQAITKMEEDFAQWYTDIVKKAELVDYS-SVKGCMILRPY 70

Query: 272 GWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIK 329
           G+ +++ +   M  K+K   +E +  P  + + L Q +  H + +   +  V    D  K
Sbjct: 71  GYALWENMQKVMDEKLKATSHENVYMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGDE-K 129

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
                 ++P +       F+  ++SY +LP    ++ SV R E +      +R   F   
Sbjct: 130 LAERLCVRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKT--TRPFLRTTEFLWQ 187

Query: 390 DAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIM 448
           + H +  T E+   E L I NL  S  +D+    ++    T  EK  G+ A +       
Sbjct: 188 EGHTIHETAEESQAETLNILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKATY------- 240

Query: 449 KGVLDTIKNSSQD--RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF 506
                TI++   D   + TG     G  +   F+    D  G+ WQ              
Sbjct: 241 -----TIESLMHDGKALQTGTSHNFGTNFSEAFDIKFLDRNGK-WQ-------------- 280

Query: 507 NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTITS 562
                           +H+  +G   R IG +I     N    +P  ++P+Q ++  I  
Sbjct: 281 ---------------YVHQTSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQVVIVPIAQ 325

Query: 563 SAVEYAQEIANLLKSH---HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSI 619
              E     A  L+ H      ++ D  N+T  +K  E+ +K IPI +  G K+  +  +
Sbjct: 326 HK-EGVLAKATELQGHIQKVARVKIDASNKTPGWKFNEYEMKGIPIRLEVGPKDIEKNQV 384

Query: 620 GIRRFGSTTTQKVS---LLDAIPILTKE 644
            + R  +   + +S   L + IP L +E
Sbjct: 385 VLVRRDTKEKEFISMDQLEERIPALLEE 412


>gi|329936661|ref|ZP_08286368.1| prolyl-tRNA synthetase [Streptomyces griseoaurantiacus M045]
 gi|329303891|gb|EGG47774.1| prolyl-tRNA synthetase [Streptomyces griseoaurantiacus M045]
          Length = 564

 Score = 51.6 bits (122), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 38/170 (22%), Positives = 78/170 (45%), Gaps = 10/170 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R     ++  + +G+  W   G K+   +   +R ++     +E+  P 
Sbjct: 21  DAETLSHKLLVRA---GYVRRNSAGIWSWLPLGKKVLDNVSRVVREEMDAIGAQEVLLPA 77

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++ S  W+ Y   +F +K      +    + L P +      V    + SY++L
Sbjct: 78  LLPKEPYEASARWEEYGDLLFRLKD-----RKGGEYLLGPTHEEIFTLVVKDQVSSYKDL 132

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
           PV L +  + YR+E +    G++R R F   D++ F T ++   E  ++H
Sbjct: 133 PVMLYQIQTKYRDE-ARPRSGVLRGREFQMKDSYSFDTTDEGLAESYRLH 181


>gi|281424584|ref|ZP_06255497.1| phosphoribulokinase family protein [Prevotella oris F0302]
 gi|281401255|gb|EFB32086.1| phosphoribulokinase family protein [Prevotella oris F0302]
          Length = 586

 Score = 51.6 bits (122), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 38/180 (21%), Positives = 79/180 (43%), Gaps = 2/180 (1%)

Query: 19  VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIRHSC 77
           + +T SD+    +  +    +   +N KV  +   V     +E +    P +      + 
Sbjct: 53  IGSTLSDIFSQFNLPMPYGPICAKVNNKVEGMHYRVYHSKDVEFLDMHSPSASRNYTRTL 112

Query: 78  AHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFL 137
             ++ +AV  ++P+  V I   + +G+Y +     P    ++ +I ++MQEII    P  
Sbjct: 113 FFVLCKAVHDLYPKSYVIIDIPVSNGYYVNLQLGHPVEQTDVDRICRRMQEIIDAHMPVK 172

Query: 138 KQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
           +  +  E+A ++F  + +  K ++LES   K   T Y   ++ D   G  + +T  +  F
Sbjct: 173 RFEVPAEQAIKMFRDRGDEAKAKLLES-AGKLYTTYYEIDDYVDFYYGSLLTNTRSLYLF 231


>gi|226330400|ref|ZP_03805918.1| hypothetical protein PROPEN_04318 [Proteus penneri ATCC 35198]
 gi|225201195|gb|EEG83549.1| hypothetical protein PROPEN_04318 [Proteus penneri ATCC 35198]
          Length = 70

 Score = 51.6 bits (122), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 20/52 (38%), Positives = 37/52 (71%), Gaps = 1/52 (1%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQS 308
           + E+  G+ FWH  GW IF+ L +++R K+K+ DY+E+  P ++D+ LW+++
Sbjct: 1   MQEEAPGMAFWHNDGWTIFRELETFVRCKLKEYDYQEVKGPFMMDRVLWEKN 52


>gi|257456072|ref|ZP_05621275.1| prolyl-tRNA synthetase [Treponema vincentii ATCC 35580]
 gi|257446530|gb|EEV21570.1| prolyl-tRNA synthetase [Treponema vincentii ATCC 35580]
          Length = 578

 Score = 51.6 bits (122), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 41/167 (24%), Positives = 76/167 (45%), Gaps = 8/167 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           G+G+  +   G ++F+ + + +R +I      E     V    +WQ+S  W +    +  
Sbjct: 36  GNGLFNYLPLGLRVFRKVENIVREEIDAIGCLECKASVVAPGEIWQESKRWYTMGDGLLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +K  +   +DL    + P N     A+  + L SY++ P+ +    + YR+E     +GL
Sbjct: 96  MK--NRLGQDL---VVSPTNEESFTALMRYELGSYKDYPLSVYHINTKYRDEIRPR-YGL 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS-IYKDFGFEKIMVK 426
           MR R FT  DA+ F T  +  ++  +        I++ FG   I V+
Sbjct: 150 MRAREFTMKDAYSFHTNAECLDKTYRAFGEAYEKIFRRFGLSIIRVR 196


>gi|75761526|ref|ZP_00741486.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
 gi|74490981|gb|EAO54237.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
          Length = 503

 Score = 51.6 bits (122), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 84/396 (21%), Positives = 153/396 (38%), Gaps = 61/396 (15%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHLWQ-QSGHWDSYRANMFAV 321
           G +     G+ +++ +   M  K+K+  +E +  P  + + L Q +  H + +   +  V
Sbjct: 64  GCMILRPYGYALWENMQKVMDEKLKETGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWV 123

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
               D  K      ++P +       F+  ++SY +LP    ++ SV R E +      +
Sbjct: 124 THGGDE-KLAERLCVRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKT--TRPFL 180

Query: 382 RVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           R   F   + H +  T E+   E L I NL  S  +D+    ++    T  EK  G+ A 
Sbjct: 181 RTTEFLWQEGHTIHETAEESQAETLNILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKAT 240

Query: 441 WDDAENIMKGVLDTIKNSSQD--RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
           +            TI++   D   + TG     G  +   F+    D  G+ WQ      
Sbjct: 241 Y------------TIESLMHDGKALQTGTSHNFGTNFSEAFDIKFLDRNGK-WQ------ 281

Query: 499 DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQ 554
                                   +H+  +G   R IG +I     N    +P  ++P+Q
Sbjct: 282 -----------------------YVHQTSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQ 318

Query: 555 AIVTTITSSAVEYAQEIANLLKSH---HLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
            ++  I     E     A  L+ H      ++ D  N+T  +K  E+ +K IPI +  G 
Sbjct: 319 VVIVPIAQHK-EGVLAKATELQGHIQKVARVKIDASNKTPGWKFNEYEMKGIPIRLEVGP 377

Query: 612 KEASERSIGIRRFGSTTTQKVS---LLDAIPILTKE 644
           K+  +  + + R  +   + +S   L + IP L +E
Sbjct: 378 KDIEKNQVVLVRRDTKEKEFISMDQLEERIPALLEE 413


>gi|237785730|ref|YP_002906435.1| prolyl-tRNA synthetase [Corynebacterium kroppenstedtii DSM 44385]
 gi|237758642|gb|ACR17892.1| Prolyl-tRNA synthetase [Corynebacterium kroppenstedtii DSM 44385]
          Length = 594

 Score = 51.6 bits (122), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 77/174 (44%), Gaps = 18/174 (10%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +  IA    GV  W   G K+ + +   +R ++     +EI  P 
Sbjct: 23  DAEVPSHKLLVRAGFIRRIA---PGVYSWLPLGLKVLRNIERIVREEMDGIGAQEIELPA 79

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L +  ++ +G W  Y   +F +K  D    D        +  P H  +F   +K    S
Sbjct: 80  LLPRDAYEVTGRWTEYGDALFRLK--DRKKGDY-------LLGPTHEEIFTETVKGEYSS 130

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
           Y++ PV L +  + YR+E      G++R R F   D++ F  K++   E  + H
Sbjct: 131 YKDFPVTLYQIQTKYRDEER-PRAGILRGREFVMCDSYSFDMKDEGLEESYQKH 183


>gi|222100805|ref|YP_002535373.1| Phosphoribulokinase/uridine kinase precursor [Thermotoga
           neapolitana DSM 4359]
 gi|221573195|gb|ACM24007.1| Phosphoribulokinase/uridine kinase precursor [Thermotoga
           neapolitana DSM 4359]
          Length = 404

 Score = 51.6 bits (122), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 40/176 (22%), Positives = 82/176 (46%), Gaps = 5/176 (2%)

Query: 26  VAESISRSLAKKAVAVAINGKVCDL-SDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEA 84
           +AE   +    + +A  +N ++ +L   P R G ++ I   DP  L + +     + + A
Sbjct: 35  LAEEYQKYFKYRILAAKVNNRIVELFRTPDRSGELDFIDLTDPDGLRIYQRGLVFLASLA 94

Query: 85  VQSIWPEVQVAIGPIIEDGFY---YDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYL 141
           V+ + P+ ++ +   +  G Y   Y+ D+     S ++  I++KM+E++ +D P  K+  
Sbjct: 95  VRKLNPDWRLKVLHSLGKGIYCEIYEKDRLIVPDSQQVISIKEKMEELVQKDLPIEKRTF 154

Query: 142 SHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
             ++ARE+   +     V + +    K  V LY    ++    G    STG++  F
Sbjct: 155 YKDEAREILLREGLEKTVRLFK-YRKKRTVKLYHCDGFWAYFYGYLPPSTGRINVF 209


>gi|322804464|emb|CBZ02014.1| uridine kinase [Clostridium botulinum H04402 065]
          Length = 552

 Score = 51.6 bits (122), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 83/194 (42%), Gaps = 2/194 (1%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           +KL  P+GS        T  DV +          V   I+ +  +L+  V+ EG    + 
Sbjct: 4   LKLYMPNGSNILVSGDKTLYDVVKENKLQDNIPIVLGKIDEEYYELTSTVKKEGVFIPVD 63

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
             D   L     +   I  +AV  ++P   V I   +  G Y +  K    + +++ +I+
Sbjct: 64  ITDSMGLKTYVRTLQFIFIKAVLDLYPGSTVVIEHSLGKGLYGEIHKTLSLNENDILKIK 123

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M EII +D    K  +  E+A E+F   K   KV +L  IP +E V LY     +D  
Sbjct: 124 NRMNEIINKDIKIKKISVKKERAIEIFNEYKMKDKVRLLSHIPHEE-VKLYELDGRYDYF 182

Query: 184 RGPHVRSTGQVKKF 197
            G    STG +K F
Sbjct: 183 YGSMAYSTGAIKNF 196


>gi|24374667|ref|NP_718710.1| prolyl-tRNA synthetase [Shewanella oneidensis MR-1]
 gi|81845788|sp|Q8ECI8|SYP_SHEON RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|24349306|gb|AAN56154.1|AE015752_11 prolyl-tRNA synthetase [Shewanella oneidensis MR-1]
          Length = 570

 Score = 51.6 bits (122), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/148 (25%), Positives = 65/148 (43%), Gaps = 7/148 (4%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I  + SG+  +   G ++ + + + +R ++ K    EI  P V    LW ++G WD +  
Sbjct: 32  IRRNASGLYSYLPSGLRVLRKVEAIVREEMNKAGAIEILMPMVQPADLWVETGRWDKFGP 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            +   K   +     R F L P +      +    + SY++LP+ L +  + +R+E    
Sbjct: 92  ELLRFKDRHN-----RDFVLGPTHEEVITDLIRKEVSSYKQLPLNLYQIQTKFRDEVRPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             G+MR R F   DA+ F       NE 
Sbjct: 147 F-GVMRSREFLMKDAYSFHLDMDTLNET 173


>gi|254458440|ref|ZP_05071865.1| prolyl-tRNA synthetase [Campylobacterales bacterium GD 1]
 gi|207084748|gb|EDZ62035.1| prolyl-tRNA synthetase [Campylobacterales bacterium GD 1]
          Length = 434

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 72/344 (20%), Positives = 124/344 (36%), Gaps = 59/344 (17%)

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW +SG  D+    M  ++      +    F L P N    V +  + + SY++LP+ L 
Sbjct: 79  LWDRSGRADAMGKEMLRIQD-----RHQNDFVLSPTNEEAMVELVKNRVTSYKDLPLNLY 133

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEK 422
           +  + +R+E     +GL+R R F   D + F  + E M  E   +      I+   G + 
Sbjct: 134 QINTKFRDEAR-PRYGLLRGREFLMKDGYSFHASTEDMIREFDLMEETYKKIFTRLGLDF 192

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
            +V+  +      GS                 + +S +D I    ++ E   YG   E I
Sbjct: 193 RVVQADSGAIGGEGSKEFH------------VLADSGEDTI----IVCESCDYGANIETI 236

Query: 483 LKD------------------AIGRDWQCG-------TIQVD--FNLPSRF-NAFYVNSH 514
             +                   I     CG        I+V   F L +++ +A   N  
Sbjct: 237 FDNEEEVDALNEKTYEELQTKEISEKCSCGGNLSFKKGIEVGHIFQLGTKYSSALEANFS 296

Query: 515 SEKCHPVMIHRAVFG-SIERFIGIMIE-NFKGNLPLWLSPIQAIVTTITSSAVE------ 566
            E   P     A FG  + R +  +IE N   N  +W          I  S ++      
Sbjct: 297 DENGKPRPFEMATFGIGVSRLVASVIEQNHDENGCIWTKETAPYTINIMVSNIKDETQMT 356

Query: 567 YAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
             +E+   L   ++    D R E   +K+++  +   P  +I G
Sbjct: 357 LGEELYLKLLGENVEAMFDDRKERFGFKMKDAELIGFPYTVIIG 400


>gi|120598308|ref|YP_962882.1| prolyl-tRNA synthetase [Shewanella sp. W3-18-1]
 gi|152016601|sp|A1RI33|SYP_SHESW RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|120558401|gb|ABM24328.1| prolyl-tRNA synthetase [Shewanella sp. W3-18-1]
          Length = 571

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/148 (25%), Positives = 65/148 (43%), Gaps = 7/148 (4%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I  + SG+  +   G ++ + + + +R ++ K    EI  P V    LW ++G WD +  
Sbjct: 32  IRRNASGLYSYLPTGLRVLRKVEAIVREEMNKAGAIEILMPMVQPADLWVETGRWDKFGP 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            +   K   +     R F L P +      +    + SY++LP+ L +  + +R+E    
Sbjct: 92  ELLRFKDRHN-----RDFVLGPTHEEVITDLIRKEVSSYKQLPLNLYQIQTKFRDEVRPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             G+MR R F   DA+ F       NE 
Sbjct: 147 F-GMMRSREFLMKDAYSFHLDVDTMNET 173


>gi|323139097|ref|ZP_08074155.1| prolyl-tRNA synthetase [Methylocystis sp. ATCC 49242]
 gi|322395661|gb|EFX98204.1| prolyl-tRNA synthetase [Methylocystis sp. ATCC 49242]
          Length = 447

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 43/167 (25%), Positives = 71/167 (42%), Gaps = 17/167 (10%)

Query: 236 YFL-------EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KI 287
           YFL       +E+E   HR + R      I ++ +G+  W   G K+   +   +R  + 
Sbjct: 6   YFLPILRETPKEAEIVSHRLMLRAG---LIRQESAGIYAWLPLGLKVLNNITRIIREEQN 62

Query: 288 KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
           +    E   P +    LW++SG +D+Y   M  +    D     R     P N      +
Sbjct: 63  RAGAIECLMPTIQSADLWRESGRYDAYGKEMLRITDRHD-----REMLFGPTNEEMITEI 117

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           F   ++SY++LP+ L      +R+E      G+MR R F   DA+ F
Sbjct: 118 FRAYVRSYKDLPLNLYHIQWKFRDEVRPRF-GVMRSREFLMKDAYSF 163


>gi|187925415|ref|YP_001897057.1| prolyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
 gi|226699128|sp|B2SYU8|SYP_BURPP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|187716609|gb|ACD17833.1| prolyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
          Length = 578

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 58/132 (43%), Gaps = 11/132 (8%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT--FALKPMNCPGHVAVFNH 350
           E+  P V    LWQ+SG W+ Y   +          KD R   F + P +      +  +
Sbjct: 68  ELLMPAVQPAELWQESGRWEKYGPELL-------RFKDRRQSDFVIGPTHEEVVTDIARN 120

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHN 409
            +KSYR+LPV   +  + +R+E      G+MR R F   DA+ F        E   K+++
Sbjct: 121 QIKSYRQLPVNFYQIQTKFRDEIRPRF-GVMRGREFIMKDAYSFDKDMDGLRESYRKMYD 179

Query: 410 LIISIYKDFGFE 421
             + I+   G +
Sbjct: 180 AYVRIFTRLGLD 191


>gi|88608761|ref|YP_506256.1| prolyl-tRNA synthetase [Neorickettsia sennetsu str. Miyayama]
 gi|114152220|sp|Q2GE40|SYP_NEOSM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|88600930|gb|ABD46398.1| prolyl-tRNA synthetase [Neorickettsia sennetsu str. Miyayama]
          Length = 436

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 72/171 (42%), Gaps = 14/171 (8%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRA 316
           + + G+G+  W   G K+ + + S +R+++      E+  P +    LW++SG +  Y  
Sbjct: 36  VKQCGAGLYSWLPLGLKVLRNIESVIRQELDSMGMHEMLMPCIQLAKLWEESGRYSDYGK 95

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            +   K   D           P N     A+    L SY++LP  L      +R+E    
Sbjct: 96  ELLKFKDRHDN-----ELLFGPTNEEVITAIVRDDLASYKQLPKILYHIQWKFRDEIRPR 150

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQ----MFNECLKIHNLIISIYKDFGFEKI 423
             GLMR R F   DA+ F   +Q     +N   K++   + I+K  G   I
Sbjct: 151 F-GLMRAREFLMKDAYSFDVDQQSARISYN---KVYQSYLRIFKRLGLNPI 197


>gi|83942873|ref|ZP_00955333.1| prolyl-tRNA synthetase [Sulfitobacter sp. EE-36]
 gi|83845881|gb|EAP83758.1| prolyl-tRNA synthetase [Sulfitobacter sp. EE-36]
          Length = 446

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 42/183 (22%), Positives = 79/183 (43%), Gaps = 11/183 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  +G+  W   G+K+ + + + +   + +  +  +  P +    LW++SG +D+Y  
Sbjct: 32  IKQSAAGIYSWLPLGFKVLRKIETIVHEEQQRAGHIPMLMPTLQSADLWKESGRFDAYGP 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  +K   D     R     P N      +F   + SY++LP+ L      +R+E    
Sbjct: 92  EMLRIKDRQD-----RDMLYGPTNEEMITDIFRSHVGSYKDLPMTLYHIQWKFRDEVRPR 146

Query: 377 LHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
             G+MR R F   D + F  TKE   +   +     +  Y+  G + I ++  + P   +
Sbjct: 147 F-GVMRGREFLMKDGYTFDLTKEDALHAYNRHLVTYLRSYERMGLQAIPMRADSGP---I 202

Query: 436 GSD 438
           G D
Sbjct: 203 GGD 205


>gi|300702990|ref|YP_003744592.1| proline--tRNA ligase [Ralstonia solanacearum CFBP2957]
 gi|299070653|emb|CBJ41948.1| Proline--tRNA ligase [Ralstonia solanacearum CFBP2957]
          Length = 574

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 54/244 (22%), Positives = 97/244 (39%), Gaps = 8/244 (3%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
           G+G+  +   G +  + +   +R ++      E+  P V    LWQ++G WD     +  
Sbjct: 36  GAGIYTYMPVGLRAIRKVEQIVREEMNAAGAVEMLMPVVQPGELWQETGRWDKMGEELMR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           VK  D   +DL    ++P +      +    ++SY+++PV   +  + +R+E      G+
Sbjct: 96  VK--DRHERDL---VIQPTSEEVVTDIARTEIRSYKQMPVNFYQIQTKFRDERRPRF-GI 149

Query: 381 MRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDA 439
           MR R FT  DA+ F    E M     K+ +    I++ FG     V          GS  
Sbjct: 150 MRGREFTMKDAYSFDRDVEGMKVSYQKMFDAYTRIFQRFGLAFRAVAADNGAIGGSGSHE 209

Query: 440 LWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVD 499
               AE     ++ + ++     I     L   A  GP  E + K +     +C  +   
Sbjct: 210 FHVIAETGEDAIVYSPESDYAANIEAAEALAPSAPRGPAAEPLAKTSTPGRAKCEAVAEQ 269

Query: 500 FNLP 503
             +P
Sbjct: 270 LGIP 273


>gi|254796740|ref|YP_003081576.1| prolyl-tRNA synthetase [Neorickettsia risticii str. Illinois]
 gi|254589987|gb|ACT69349.1| prolyl-tRNA synthetase [Neorickettsia risticii str. Illinois]
          Length = 436

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 72/171 (42%), Gaps = 14/171 (8%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRA 316
           + + G+G+  W   G K+ + + S +R+++      E+  P +    LW++SG +  Y  
Sbjct: 36  VKQCGAGLYSWLPLGLKVLKNIESIIRQELDSMGMHEMLMPCIQLAKLWEESGRYSDYGR 95

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            +   K   D           P N     A+    L SY++LP  L      +R+E    
Sbjct: 96  ELLKFKDRHDN-----ELLFGPTNEEVITAIVRDDLASYKQLPKILYHIQWKFRDEIRPR 150

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQ----MFNECLKIHNLIISIYKDFGFEKI 423
             GLMR R F   DA+ F   +Q     +N   K++   + I+K  G   I
Sbjct: 151 F-GLMRAREFLMKDAYSFDVDQQSARISYN---KVYQSYLRIFKRLGLNPI 197


>gi|153952152|ref|YP_001398429.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. doylei 269.97]
 gi|166980114|sp|A7H4J9|SYP_CAMJD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|152939598|gb|ABS44339.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. doylei 269.97]
          Length = 569

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/139 (23%), Positives = 66/139 (47%), Gaps = 7/139 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           GSG+  +   G ++   + + ++ ++ K   +E+N   +    LWQ+SG ++ +   +  
Sbjct: 37  GSGLYNFLPLGKRVLDKIKNIVKEEMDKAGAQEVNLSFITPASLWQESGRYNVFGKELLR 96

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            K   +       F L P +    +++  + + SY++LP+ L + G  +R+E      GL
Sbjct: 97  FKDRKEN-----EFVLGPTHEEAMLSLVKNKITSYKQLPLHLYQIGLKFRDEARPRF-GL 150

Query: 381 MRVRGFTQDDAHVFCTKEQ 399
           +R R F   D + F   E+
Sbjct: 151 LRCREFLMKDGYSFHANEE 169


>gi|19112749|ref|NP_595957.1| mitochondrial proline-tRNA ligase (predicted) [Schizosaccharomyces
           pombe 972h-]
 gi|74676105|sp|O74765|SYPM_SCHPO RecName: Full=Probable prolyl-tRNA synthetase, mitochondrial;
           AltName: Full=Proline--tRNA ligase; Short=ProRS; Flags:
           Precursor
 gi|3687477|emb|CAA21147.1| mitochondrial proline-tRNA ligase (predicted) [Schizosaccharomyces
           pombe]
          Length = 425

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 72/356 (20%), Positives = 150/356 (42%), Gaps = 75/356 (21%)

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           I+   +  + +W++SG W    + +F +   +D     R   L P +           + 
Sbjct: 74  ISLAHLSSKEIWEKSGRWQKTGSELFRLHDRND-----REMCLAPTHEEDVTRTMATIID 128

Query: 354 SYRELPVRLAEFGSVYRNE--PSGSLHGLMRVRGFTQDDAHVF----CTKEQMFNECLKI 407
           S ++LP+R+ + G  +R+E  P G   GL+R R F   D + F     +  + + + L+ 
Sbjct: 129 SQKQLPIRVYQIGRKFRDELRPRG---GLLRGREFMMKDLYTFDIDKASAMKTYEDVLQA 185

Query: 408 HNLIISIYKDFGFEKIMVKLST-----------RPEKRVGSDALWDDAE---NIMKGVLD 453
           ++   + +K+ G   +MVK +T                VG D ++       +    +LD
Sbjct: 186 YH---TFFKEVGLPFVMVKAATGNIGGNLSHEFHYRHPVGEDVIYTCPSCHYSTNSEMLD 242

Query: 454 TIKNSS-------QDRINTGVLLGEG-AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSR 505
             K SS        D++ +   +  G AFY           +G+ +            S+
Sbjct: 243 LSKTSSDISCPNCNDQLTSTTAIEVGHAFY-----------LGKIYS-----------SK 280

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFG-SIERFIGI---MIENFKGNL-PLWLSPIQAIVTTI 560
           FNA     + ++    ++H   +G  + R I     + ++ KG + P  ++P + +V   
Sbjct: 281 FNATVEVKNKQE----VLHMGCYGIGVSRLIAAVAHVTKDAKGLVWPSSIAPWKVLVVPT 336

Query: 561 TSSAVEYAQEI----ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
           + + ++ A+ +    AN++   ++ +E D +N    YK+R+  +   P +I+ G +
Sbjct: 337 SDNHIQSAETVYDATANVVGFDNVLLE-DRQNRAFGYKMRDAELIGYPFVIVVGSR 391


>gi|146293614|ref|YP_001184038.1| prolyl-tRNA synthetase [Shewanella putrefaciens CN-32]
 gi|166980158|sp|A4Y8F6|SYP_SHEPC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|145565304|gb|ABP76239.1| prolyl-tRNA synthetase [Shewanella putrefaciens CN-32]
          Length = 571

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/148 (25%), Positives = 65/148 (43%), Gaps = 7/148 (4%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I  + SG+  +   G ++ + + + +R ++ K    EI  P V    LW ++G WD +  
Sbjct: 32  IRRNASGLYSYLPTGLRVLRKVEAIVREEMNKAGAIEILMPMVQPADLWVETGRWDKFGP 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            +   K   +     R F L P +      +    + SY++LP+ L +  + +R+E    
Sbjct: 92  ELLRFKDRHN-----RDFVLGPTHEEVITDLIRKEVSSYKQLPLNLYQIQTKFRDEVRPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             G+MR R F   DA+ F       NE 
Sbjct: 147 F-GMMRSREFLMKDAYSFHLDVDTMNET 173


>gi|258542706|ref|YP_003188139.1| prolyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01]
 gi|256633784|dbj|BAH99759.1| prolyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01]
 gi|256636843|dbj|BAI02812.1| prolyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-03]
 gi|256639896|dbj|BAI05858.1| prolyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-07]
 gi|256642952|dbj|BAI08907.1| prolyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-22]
 gi|256646007|dbj|BAI11955.1| prolyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-26]
 gi|256649060|dbj|BAI15001.1| prolyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-32]
 gi|256652047|dbj|BAI17981.1| prolyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01-42C]
 gi|256655104|dbj|BAI21031.1| prolyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-12]
          Length = 438

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 86/414 (20%), Positives = 156/414 (37%), Gaps = 40/414 (9%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYR 315
           I +  SG+  W   G K+ +  IS + R+ +D    +E+  P +    LW++SG +D+Y 
Sbjct: 32  IRQTASGIYAWLPAGLKVLRN-ISQIVREEQDRVGAQEVLMPTLQSADLWKRSGRYDAYG 90

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
             M  ++      +  R     P N      +F   +KSY++LP  L      +R+E   
Sbjct: 91  PEMLRIQD-----RHKRELLYGPTNEEMITDLFGQTVKSYKDLPQVLYHIQWKFRDEMRP 145

Query: 376 SLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              G+MR R F   DA+ F    E       ++    +  ++  G   + ++  T P   
Sbjct: 146 RF-GVMRGREFLMKDAYSFDLDYESAVATYRRMLLAYLRTFQRLGVRAVPMRADTGPIGG 204

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRI------NTGVLLGEGAFYGPKFEYILKDAI- 487
             S      A     GV        QD +      N+ V L E  F      Y   D + 
Sbjct: 205 ELSHEFLILAPTGESGVFYDAALEEQDWLDEPVDTNSPVAL-EAFFNRVTTPYAATDEMH 263

Query: 488 ---------------GRDWQCGTIQVDFNLPSRFNAFYVNS-HSEKCHPVMIHRAVFGSI 531
                          GR  + G I    +  +R     V+     + +P M    +   +
Sbjct: 264 DEAGWQAVPAERQREGRGVEVGHIFYFGDKYTRSMDVSVSGPDGNQLYPEMGSYGI--GV 321

Query: 532 ERFIGIMIEN-FKGNLPLW---LSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR 587
            R  G +IE     N  +W   ++P +A++  + +           +  ++  +   D R
Sbjct: 322 SRLAGAIIEACHDDNGIIWPDAVAPFRAVILNLKNGDELCDAICERIYSTNEEAFLYDDR 381

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            E    K  +  +   P  I+ G + A E  + ++R  +    +VS+ DA+ ++
Sbjct: 382 AERAGVKFADADLMGHPWQIVVGPRGAKEGKVELKRRATGERHEVSVDDALALV 435


>gi|300690369|ref|YP_003751364.1| proline--tRNA ligase [Ralstonia solanacearum PSI07]
 gi|299077429|emb|CBJ50055.1| Proline--tRNA ligase [Ralstonia solanacearum PSI07]
          Length = 574

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/162 (24%), Positives = 73/162 (45%), Gaps = 8/162 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           G+G+  +   G +  + +   +R ++      E+  P V    LWQ++G WD     +  
Sbjct: 36  GAGIYTYMPVGLRAIRKVEQIVREEMNAAGAVEMLMPVVQPGELWQETGRWDKMGEELMR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           VK   +     R   ++P +      +    ++SY+++PV   +  + +R+E      G+
Sbjct: 96  VKDRHE-----RDLVIQPTSEEVVTDIARTEIRSYKQMPVNFYQIQTKFRDERRPRF-GI 149

Query: 381 MRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFE 421
           MR R FT  DA+ F    E M     K+++    I++ FG E
Sbjct: 150 MRGREFTMKDAYSFDRDVEGMKVSYGKMYDAYTRIFQRFGLE 191


>gi|332670041|ref|YP_004453049.1| prolyl-tRNA synthetase [Cellulomonas fimi ATCC 484]
 gi|332339079|gb|AEE45662.1| prolyl-tRNA synthetase [Cellulomonas fimi ATCC 484]
          Length = 597

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 43/196 (21%), Positives = 86/196 (43%), Gaps = 19/196 (9%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R     +I     G+  W   G ++   + + +R ++     +E++ P 
Sbjct: 19  DAEVASHKLLVRAG---YIRRAAPGIYTWLPLGLRVLAKVEAVVREEMAAAGAQEVHFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L +  ++ +G W  Y  N+F +K  D    D        +  P H  +F   +K    S
Sbjct: 76  LLPKEPYEATGRWTEYGPNIFRLK--DRKGGDY-------LLAPTHEELFTLLVKDLYSS 126

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS- 413
           Y++LP+ L +  + YR+E +    GL+R R F   DA+ F   +   +            
Sbjct: 127 YKDLPLTLFQIQTKYRDE-ARPRAGLIRGREFVMKDAYSFDVDDAGLDASYAAQRAAYQR 185

Query: 414 IYKDFGFEKIMVKLST 429
           +++  G E ++V  ++
Sbjct: 186 VFERLGLEYVIVSATS 201


>gi|329114694|ref|ZP_08243453.1| Prolyl-tRNA synthetase [Acetobacter pomorum DM001]
 gi|326696174|gb|EGE47856.1| Prolyl-tRNA synthetase [Acetobacter pomorum DM001]
          Length = 459

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 64/139 (46%), Gaps = 9/139 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYR 315
           I +  SG+  W   G K+ +  IS + R+ +D    +E+  P +    LW++SG +D+Y 
Sbjct: 53  IRQTASGIYAWLPAGLKVLRN-ISQIVREEQDRVGAQEVLMPTLQSADLWKRSGRYDAYG 111

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
             M  ++      +  R     P N      +F   +KSY++LP  L      +R+E   
Sbjct: 112 PEMLRIQD-----RHKRELLYGPTNEEMITDLFGQTVKSYKDLPQVLYHIQWKFRDEMRP 166

Query: 376 SLHGLMRVRGFTQDDAHVF 394
              G+MR R F   DA+ F
Sbjct: 167 RF-GVMRGREFLMKDAYSF 184


>gi|254421628|ref|ZP_05035346.1| prolyl-tRNA synthetase [Synechococcus sp. PCC 7335]
 gi|196189117|gb|EDX84081.1| prolyl-tRNA synthetase [Synechococcus sp. PCC 7335]
          Length = 597

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 75/159 (47%), Gaps = 9/159 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+E   H+ L R   +  IA   SG+  +     ++   + + +R ++     +E   PQ
Sbjct: 12  EAEIPSHKLLLRAGYMRRIA---SGLYAYLPLLQRVLDKVSAIVREEMNATGAQECLLPQ 68

Query: 299 VLDQHLWQQSGHWDSY-RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           +    LW++SG WD+Y +A        D   ++L   AL P +     A+    ++SY++
Sbjct: 69  LQPASLWKESGRWDTYTKAEGIMFSLGDRRDQEL---ALGPTHEEVITAIARDMIRSYKQ 125

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT 396
           LP+ L +  + +R+E      GLMR R F   D + F T
Sbjct: 126 LPLHLYQIQTKFRDEIRPRF-GLMRGREFIMKDGYSFHT 163


>gi|305433094|ref|ZP_07402250.1| proline--tRNA ligase [Campylobacter coli JV20]
 gi|304443795|gb|EFM36452.1| proline--tRNA ligase [Campylobacter coli JV20]
          Length = 569

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/139 (23%), Positives = 66/139 (47%), Gaps = 7/139 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           GSG+  +   G ++   + + ++ ++ K   +E+N   +    LWQ+SG ++ +   +  
Sbjct: 37  GSGLYNFLPLGKRVLDKIKNIVKEEMDKAGAQEVNLSFITPASLWQESGRYNVFGKELLR 96

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            K   +       F L P +    +++  + + SY++LP+ L + G  +R+E      GL
Sbjct: 97  FKDRKEN-----EFVLGPTHEEAMLSLVKNKITSYKQLPLHLYQIGLKFRDEARPRF-GL 150

Query: 381 MRVRGFTQDDAHVFCTKEQ 399
           +R R F   D + F   E+
Sbjct: 151 LRCREFLMKDGYSFHANEE 169


>gi|205355399|ref|ZP_03222170.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8421]
 gi|205346633|gb|EDZ33265.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8421]
          Length = 569

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/139 (23%), Positives = 66/139 (47%), Gaps = 7/139 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           GSG+  +   G ++   + + ++ ++ K   +E+N   +    LWQ+SG ++ +   +  
Sbjct: 37  GSGLYNFLPLGKRVLDKIKNIVKEEMDKAGAQEVNLSFITPASLWQESGRYNVFGKELLR 96

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            K   +       F L P +    +++  + + SY++LP+ L + G  +R+E      GL
Sbjct: 97  FKDRKEN-----EFVLGPTHEEAMLSLVKNKITSYKQLPLHLYQIGLKFRDEARPRF-GL 150

Query: 381 MRVRGFTQDDAHVFCTKEQ 399
           +R R F   D + F   E+
Sbjct: 151 LRCREFLMKDGYSFHANEE 169


>gi|166030944|ref|ZP_02233773.1| hypothetical protein DORFOR_00625 [Dorea formicigenerans ATCC
           27755]
 gi|166029211|gb|EDR47968.1| hypothetical protein DORFOR_00625 [Dorea formicigenerans ATCC
           27755]
          Length = 556

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 49/197 (24%), Positives = 85/197 (43%), Gaps = 14/197 (7%)

Query: 14  IKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAV 72
           +K +    T  D+A+   +    + V V ++GK+ +L   +++   I  +T  DP     
Sbjct: 15  VKEYEAAITYHDIAKEYQKDYEHEIVLVFVDGKLQELHKRLKKDCEISFVTTADPIGHEA 74

Query: 73  IRHSCAHIMAEAVQSIWP-------EVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
            + S + ++ +AV  +          +  AIGP    G+Y     E     D L ++E +
Sbjct: 75  YKRSMSFLLVKAVYDVAGHKNIDKVRMHFAIGP----GYYCTITGETRVDDDFLERVESR 130

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M E++  D    K+ +   +A  LF  +   Y  E L        V LY   E+ D   G
Sbjct: 131 MHELVEADLSIKKRTVHTNEAIGLF-GQYGMYDKEELFRYRRVSKVNLYSINEFEDYYYG 189

Query: 186 PHVRSTGQVKKFFKLMK 202
             + STG + K+FKL +
Sbjct: 190 YMLYSTGYL-KYFKLYR 205


>gi|89071223|ref|ZP_01158404.1| alanyl-tRNA synthetase [Oceanicola granulosus HTCC2516]
 gi|89043236|gb|EAR49465.1| alanyl-tRNA synthetase [Oceanicola granulosus HTCC2516]
          Length = 885

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/137 (23%), Positives = 66/137 (48%), Gaps = 5/137 (3%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPI-IEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++ EA++++  +     G +   D   +DF   +   +D++A +E+++ E+I ++
Sbjct: 563 HSATHLLNEALRNVLGDHVAQRGSLNAPDRLRFDFSHNKAMGADDIAAVEREVNELIRQN 622

Query: 134 SPFLKQYLSHEKAREL----FESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
           +P   + ++ ++AR L       +K   +V ++    A     L  +    +LC G HV 
Sbjct: 623 APVTTRIMTPDEARALGAQALFGEKYGDEVRVVSMGIADTGKGLDGKTYSIELCGGTHVA 682

Query: 190 STGQVKKFFKLMKVAGA 206
            TG +  F    + A A
Sbjct: 683 RTGDIGLFALTTEAASA 699


>gi|86153499|ref|ZP_01071703.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni HB93-13]
 gi|85843225|gb|EAQ60436.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni HB93-13]
          Length = 569

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/139 (23%), Positives = 66/139 (47%), Gaps = 7/139 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           GSG+  +   G ++   + + ++ ++ K   +E+N   +    LWQ+SG ++ +   +  
Sbjct: 37  GSGLYNFLPLGKRVLDKIKNIVKEEMDKAGAQEVNLSFITPASLWQESGRYNVFGKELLR 96

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            K   +       F L P +    +++  + + SY++LP+ L + G  +R+E      GL
Sbjct: 97  FKDRKEN-----EFVLGPTHEEAMLSLVKNKITSYKQLPLHLYQIGLKFRDEARPRF-GL 150

Query: 381 MRVRGFTQDDAHVFCTKEQ 399
           +R R F   D + F   E+
Sbjct: 151 LRCREFLMKDGYSFHANEE 169


>gi|84686864|ref|ZP_01014748.1| alanyl-tRNA synthetase [Maritimibacter alkaliphilus HTCC2654]
 gi|84665061|gb|EAQ11541.1| alanyl-tRNA synthetase [Rhodobacterales bacterium HTCC2654]
          Length = 882

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/155 (23%), Positives = 70/155 (45%), Gaps = 11/155 (7%)

Query: 54  VREGSIE------IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPI-IEDGFYY 106
           V EGSIE      +    D RS     HS  H++ EA++    +     G +   D   +
Sbjct: 534 VVEGSIERGQGAELTVEHDRRSAIRANHSATHLLHEALREALGDHVAQRGSLNAPDRLRF 593

Query: 107 DFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKAREL----FESKKEAYKVEIL 162
           DF   +  ++DE+ ++E+ +   + +++P   + ++ + AR L       +K   +V ++
Sbjct: 594 DFSHNKALTADEIGRVERDVNAYVRQNTPVETRIMAPDDARALGAQALFGEKYGDEVRVV 653

Query: 163 ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
               A     + ++    +LC G HV+ TG +  F
Sbjct: 654 SMGRAATGKGVDKETYSIELCGGTHVKRTGDIGAF 688


>gi|283955965|ref|ZP_06373455.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336]
 gi|283792625|gb|EFC31404.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336]
          Length = 568

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/139 (23%), Positives = 66/139 (47%), Gaps = 7/139 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           GSG+  +   G ++   + + ++ ++ K   +E+N   +    LWQ+SG ++ +   +  
Sbjct: 36  GSGLYNFLPLGKRVLDKIKNIVKEEMDKAGAQEVNLSFITPASLWQESGRYNVFGKELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            K   +       F L P +    +++  + + SY++LP+ L + G  +R+E      GL
Sbjct: 96  FKDRKEN-----EFVLGPTHEEAMLSLVKNKITSYKQLPLHLYQIGLKFRDEARPRF-GL 149

Query: 381 MRVRGFTQDDAHVFCTKEQ 399
           +R R F   D + F   E+
Sbjct: 150 LRCREFLMKDGYSFHANEE 168


>gi|239907072|ref|YP_002953813.1| prolyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
 gi|259511592|sp|C4XTD0|SYP_DESMR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|239796938|dbj|BAH75927.1| prolyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
          Length = 575

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 7/133 (5%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           +G+  +   G K    +   +R ++ +    EI  P V    LW++SG WD Y   +   
Sbjct: 37  AGIYTYLPLGLKALNNVAKIVREEMDRAGALEILMPAVQPADLWKESGRWDFYGRELLRF 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
               D     R   L P +      +  H ++SYR+LPV L +  + +R+E      GLM
Sbjct: 97  VDRHD-----RESCLGPTHEEVVTDLVRHEIRSYRQLPVNLYQIQTKFRDEIRPRF-GLM 150

Query: 382 RVRGFTQDDAHVF 394
           R R F   DA+ F
Sbjct: 151 RGREFVMKDAYSF 163


>gi|53803705|ref|YP_114445.1| prolyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
 gi|81823621|sp|Q606K3|SYP_METCA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|53757466|gb|AAU91757.1| prolyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
          Length = 583

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P V    LWQ+SG W+ Y   +  +    D     R F L P +      +  + L
Sbjct: 68  EVLMPVVQPAELWQESGRWEQYGPELARLHDRHD-----RAFCLGPTHEEIITDLARNEL 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSYR+LPV   +  + +R+E      G+MR R F   DA+ F
Sbjct: 123 KSYRQLPVNFYQIQTKFRDEIRPRF-GVMRAREFVMKDAYSF 163


>gi|86151603|ref|ZP_01069817.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 260.94]
 gi|85841232|gb|EAQ58480.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 260.94]
          Length = 569

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/139 (23%), Positives = 66/139 (47%), Gaps = 7/139 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           GSG+  +   G ++   + + ++ ++ K   +E+N   +    LWQ+SG ++ +   +  
Sbjct: 37  GSGLYNFLPLGKRVLDKIKNIVKEEMDKAGAQEVNLSFITPASLWQESGRYNVFGKELLR 96

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            K   +       F L P +    +++  + + SY++LP+ L + G  +R+E      GL
Sbjct: 97  FKDRKEN-----EFVLGPTHEEAMLSLVKNKITSYKQLPLHLYQIGLKFRDEARPRF-GL 150

Query: 381 MRVRGFTQDDAHVFCTKEQ 399
           +R R F   D + F   E+
Sbjct: 151 LRCREFLMKDGYSFHANEE 169


>gi|315057961|gb|ADT72290.1| Prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni S3]
          Length = 568

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/139 (23%), Positives = 66/139 (47%), Gaps = 7/139 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           GSG+  +   G ++   + + ++ ++ K   +E+N   +    LWQ+SG ++ +   +  
Sbjct: 36  GSGLYNFLPLGKRVLDKIKNIVKEEMDKAGAQEVNLSFITPASLWQESGRYNVFGKELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            K   +       F L P +    +++  + + SY++LP+ L + G  +R+E      GL
Sbjct: 96  FKDRKEN-----EFVLGPTHEEAMLSLVKNKITSYKQLPLHLYQIGLKFRDEARPRF-GL 149

Query: 381 MRVRGFTQDDAHVFCTKEQ 399
           +R R F   D + F   E+
Sbjct: 150 LRCREFLMKDGYSFHANEE 168


>gi|83954043|ref|ZP_00962763.1| prolyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1]
 gi|83841080|gb|EAP80250.1| prolyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1]
          Length = 446

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 42/183 (22%), Positives = 79/183 (43%), Gaps = 11/183 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  +G+  W   G+K+ + + + +   + +  +  +  P +    LW++SG +D+Y  
Sbjct: 32  IKQSAAGIYSWLPLGFKVLRKIETIVHEEQQRAGHIPMLMPTLQSADLWKESGRFDAYGP 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  +K   D     R     P N      +F   + SY++LP+ L      +R+E    
Sbjct: 92  EMLRIKDRQD-----RDMLYGPTNEEMITDIFRSHVGSYKDLPMTLYHIQWKFRDEVRPR 146

Query: 377 LHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
             G+MR R F   D + F  TKE   +   +     +  Y+  G + I ++  + P   +
Sbjct: 147 F-GVMRGREFLMKDGYTFDLTKEDALHAYNRHLVTYLRSYERMGLQAIPMRADSGP---I 202

Query: 436 GSD 438
           G D
Sbjct: 203 GGD 205


>gi|311030092|ref|ZP_07708182.1| prolyl-tRNA synthetase [Bacillus sp. m3-13]
          Length = 561

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 40/166 (24%), Positives = 78/166 (46%), Gaps = 10/166 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E + H+ L R     +I ++ SG+  +   G K+ + +   +R ++++    E+  P 
Sbjct: 17  DAEVKSHQLLLR---AGYIRQNTSGIYSFLPLGKKVLKKVEDVVREEMENAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW++SG W SY   +  +    +     R FAL   +      +    +KSY++L
Sbjct: 74  MQAAELWKESGRWYSYGPELMRLNDRHN-----REFALGATHEEVITTLVRDEVKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           P+ L +  + +R+E      GL+R R F   DA+ F    +  +E 
Sbjct: 129 PLSLYQIQTKFRDEKRPRF-GLLRGREFLMKDAYSFHANAESLDET 173


>gi|296116519|ref|ZP_06835129.1| prolyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769]
 gi|295976731|gb|EFG83499.1| prolyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769]
          Length = 439

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 41/156 (26%), Positives = 69/156 (44%), Gaps = 10/156 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E++   HR + R      I +  +G+  W   G K+ + + + +R +      +E+  P 
Sbjct: 17  EAQITSHRLMLRAG---LIRQTSAGIYAWLPAGLKVLRNIANIVRAEQDAIGAQEMLMPT 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW++SG +D+Y   M  ++   +     R     P N      +F   +KSYREL
Sbjct: 74  LQSSELWKRSGRYDAYGPEMLRIRDRHE-----RDLLYGPTNEEMVTDLFGQVVKSYREL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           P  L      +R+E      G+MR R F   DA+ F
Sbjct: 129 PQVLYHVQWKFRDEVRPRF-GVMRGREFYMKDAYSF 163


>gi|260462251|ref|ZP_05810495.1| prolyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075]
 gi|259032111|gb|EEW33378.1| prolyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075]
          Length = 442

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 84/204 (41%), Gaps = 20/204 (9%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+E   HR + R      I + G G   W   G ++   +   +R  + +    EI  P 
Sbjct: 17  EAEIVSHRLMLRAG---MIRQQGQGSFSWLPLGKRVLDKVCQIIREEQNRAGALEILMPT 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW++SG +D Y   M  +K   D     R     P N      +    +KSY++L
Sbjct: 74  IQSADLWRESGRYDDYGKEMLRIKDRQD-----RDMLYGPTNEEVVTEIVRAYVKSYKDL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKD 417
           P+ L      +R+E      G+MR R F   DA+ F   +  F      +N + +S  + 
Sbjct: 129 PLNLYHIQWKFRDEVRPRF-GVMRSREFLMKDAYSF---DLDFEGAKAAYNRMFVSYLRT 184

Query: 418 F---GFEKIMVKLSTRPEKRVGSD 438
           F   G + I ++  T P   +G D
Sbjct: 185 FTRMGLQAIPMRADTGP---IGGD 205


>gi|57238257|ref|YP_178662.1| prolyl-tRNA synthetase [Campylobacter jejuni RM1221]
 gi|81819550|sp|Q5HVM3|SYP_CAMJR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|57167061|gb|AAW35840.1| prolyl-tRNA synthetase [Campylobacter jejuni RM1221]
          Length = 569

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/139 (23%), Positives = 66/139 (47%), Gaps = 7/139 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           GSG+  +   G ++   + + ++ ++ K   +E+N   +    LWQ+SG ++ +   +  
Sbjct: 37  GSGLYNFLPLGKRVLDKIKNIVKEEMDKAGAQEVNLSFITPASLWQESGRYNVFGKELLR 96

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            K   +       F L P +    +++  + + SY++LP+ L + G  +R+E      GL
Sbjct: 97  FKDRKEN-----EFVLGPTHEEAMLSLVKNKITSYKQLPLHLYQIGLKFRDEARPRF-GL 150

Query: 381 MRVRGFTQDDAHVFCTKEQ 399
           +R R F   D + F   E+
Sbjct: 151 LRCREFLMKDGYSFHANEE 169


>gi|238926724|ref|ZP_04658484.1| proline--tRNA ligase [Selenomonas flueggei ATCC 43531]
 gi|238885256|gb|EEQ48894.1| proline--tRNA ligase [Selenomonas flueggei ATCC 43531]
          Length = 570

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 63/138 (45%), Gaps = 7/138 (5%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +   G+  +    W+  + +   +R ++     +EI  P +    LW++SG W +Y A
Sbjct: 32  IRKSAGGMYTYLPLAWRTIRKIEQIIREEMDAAGGQEIMMPILQPSELWEESGRWGAYGA 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  VK      +  R F + P +     A+    ++SY++LP+ L +    +R+E    
Sbjct: 92  EMIRVK-----DRHGREFCMGPTHEEMITALVRDEVRSYKQLPLMLYQIQDKFRDERRPR 146

Query: 377 LHGLMRVRGFTQDDAHVF 394
             G+MR R F   D + F
Sbjct: 147 F-GVMRSREFIMKDLYSF 163


>gi|284925806|gb|ADC28158.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni IA3902]
          Length = 569

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/139 (23%), Positives = 66/139 (47%), Gaps = 7/139 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           GSG+  +   G ++   + + ++ ++ K   +E+N   +    LWQ+SG ++ +   +  
Sbjct: 37  GSGLYNFLPLGKRVLDKIKNIVKEEMDKAGAQEVNLSFITPASLWQESGRYNVFGKELLR 96

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            K   +       F L P +    +++  + + SY++LP+ L + G  +R+E      GL
Sbjct: 97  FKDRKEN-----EFVLGPTHEEAMLSLVKNKITSYKQLPLHLYQIGLKFRDEARPRF-GL 150

Query: 381 MRVRGFTQDDAHVFCTKEQ 399
           +R R F   D + F   E+
Sbjct: 151 LRCREFLMKDGYSFHANEE 169


>gi|218562195|ref|YP_002343974.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|81858473|sp|Q9PHX1|SYP_CAMJE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|112359901|emb|CAL34689.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
          Length = 569

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/139 (23%), Positives = 66/139 (47%), Gaps = 7/139 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           GSG+  +   G ++   + + ++ ++ K   +E+N   +    LWQ+SG ++ +   +  
Sbjct: 37  GSGLYNFLPLGKRVLDKIKNIVKEEMDKAGAQEVNLSFITPASLWQESGRYNVFGKELLR 96

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            K   +       F L P +    +++  + + SY++LP+ L + G  +R+E      GL
Sbjct: 97  FKDRKEN-----EFVLGPTHEEAMLSLVKNKITSYKQLPLHLYQIGLKFRDEARPRF-GL 150

Query: 381 MRVRGFTQDDAHVFCTKEQ 399
           +R R F   D + F   E+
Sbjct: 151 LRCREFLMKDGYSFHANEE 169


>gi|49479045|ref|YP_034723.1| prolyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|81397340|sp|Q6HNZ7|SYP2_BACHK RecName: Full=Prolyl-tRNA synthetase 2; AltName: Full=Proline--tRNA
           ligase 2; Short=ProRS 2
 gi|49330601|gb|AAT61247.1| proline--tRNA ligase (prolyl-tRNA synthetase) [Bacillus
           thuringiensis serovar konkukian str. 97-27]
          Length = 476

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 83/400 (20%), Positives = 154/400 (38%), Gaps = 69/400 (17%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAV 321
           G +     G+ +++ +   M  K+K   +E +  P  + + L Q +  H + +   +  V
Sbjct: 37  GCMILRPYGYALWENMQKVMDEKLKATGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWV 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
               D  K      ++P +       F+  ++SY +LP    ++ SV R E +      +
Sbjct: 97  THGGDE-KLAERLCVRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKT--TRPFL 153

Query: 382 RVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           R   F   + H +  T E+   E L I NL  S  +D+    ++    T  EK  G+ A 
Sbjct: 154 RTTEFLWQEGHTIHETAEESQAETLNILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKAT 213

Query: 441 WDDAENIMKGVLDTIKNSSQD--RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
           +            TI++   D   + TG     G  +   F+    D  G+ WQ      
Sbjct: 214 Y------------TIESLMHDGKALQTGTSHNFGTNFSEAFDIKFLDRNGK-WQ------ 254

Query: 499 DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQ 554
                                   +H+  +G   R IG +I     N    +P  ++P+Q
Sbjct: 255 -----------------------YVHQTSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQ 291

Query: 555 AIVTTIT-------SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIII 607
            ++  I        + A+E    I  + +     ++ D  N+T  +K  E+ +K IPI +
Sbjct: 292 VVIVPIAQHKEGVLAKAIELQGHIQKVAR-----VKIDASNKTPGWKFNEYEMKGIPIRL 346

Query: 608 ICGDKEASERSIGIRRFGSTTTQKVS---LLDAIPILTKE 644
             G K+  +  + + R  +   + +S   L + IP L +E
Sbjct: 347 EVGPKDIEKNQVVLVRRDTKEKEFISMDQLEERIPALLEE 386


>gi|88597079|ref|ZP_01100315.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 84-25]
 gi|88190768|gb|EAQ94741.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 84-25]
 gi|315927040|gb|EFV06395.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           DFVF1099]
          Length = 568

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/139 (23%), Positives = 66/139 (47%), Gaps = 7/139 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           GSG+  +   G ++   + + ++ ++ K   +E+N   +    LWQ+SG ++ +   +  
Sbjct: 36  GSGLYNFLPLGKRVLDKIKNIVKEEMDKAGAQEVNLSFITPASLWQESGRYNVFGKELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            K   +       F L P +    +++  + + SY++LP+ L + G  +R+E      GL
Sbjct: 96  FKDRKEN-----EFVLGPTHEEAMLSLVKNKITSYKQLPLHLYQIGLKFRDEARPRF-GL 149

Query: 381 MRVRGFTQDDAHVFCTKEQ 399
           +R R F   D + F   E+
Sbjct: 150 LRCREFLMKDGYSFHANEE 168


>gi|303388510|ref|XP_003072489.1| prolyl-tRNA synthetase [Encephalitozoon intestinalis ATCC 50506]
 gi|303301629|gb|ADM11129.1| prolyl-tRNA synthetase [Encephalitozoon intestinalis ATCC 50506]
          Length = 508

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 86/386 (22%), Positives = 159/386 (41%), Gaps = 69/386 (17%)

Query: 273 WKIFQTLISYMRRKIKD-DYEEINTPQVLDQH-LWQQSGHWDSYRANM-FAVKCADDTIK 329
           WK  Q    +   KI++   +E   P ++ +  L ++  H +++   + +  KC ++ + 
Sbjct: 57  WKCIQ---KWFTEKIEELGVQECYFPMLVPKSTLEKEKNHVENFSPEVAWITKCGNEVLG 113

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
           D    A++P +       F+  ++S+R+LP+++ ++ SV R E  G+L   +R + F   
Sbjct: 114 D--PVAVRPTSETIIYPSFSKWIRSHRDLPLKINQWCSVLRWELHGTLP-FIRGKEFLWQ 170

Query: 390 DAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIM 448
           + H  F TKE+   E   I +L   IY +     ++    +  EK  G+D          
Sbjct: 171 EGHTAFLTKEESDVEVFAILDLYSRIYSELLAVPVIKGRKSESEKFGGAD---------- 220

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
                                     Y    E  +  + GR  Q GT     +L   F+ 
Sbjct: 221 --------------------------YTTSIEAFIPGS-GRGIQAGT---SHSLGQNFSK 250

Query: 509 FY---VNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIV--TT 559
            +   V++     +   +++  +G   R IGI I     NL L L P    IQ +V    
Sbjct: 251 MFDIKVDTEEGSENSSFVYQNSWGLTTRSIGIAIMIHSDNLGLVLPPRVAMIQVVVIPCG 310

Query: 560 ITSSAVE--------YAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICG 610
           IT+S+ E        Y  +I   LK + + +  D RN  T+ +K     I+ +P+ +  G
Sbjct: 311 ITASSSEEDVESLRTYISKIHAQLK-NFVRVHVDDRNNVTVGFKFNHWEIRGVPLRLEVG 369

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLD 636
            K+ +     + R  +   ++VS+ D
Sbjct: 370 FKDMANSEACLVRRDTRAKKQVSVED 395


>gi|254166566|ref|ZP_04873420.1| prolyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|289596405|ref|YP_003483101.1| prolyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|197624176|gb|EDY36737.1| prolyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|289534192|gb|ADD08539.1| prolyl-tRNA synthetase [Aciduliprofundum boonei T469]
          Length = 465

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 75/371 (20%), Positives = 155/371 (41%), Gaps = 54/371 (14%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL-DQHLWQQSGHWDSYRANMFAV 321
           G+  W   GW++ + +  Y R+   +  ++E+  P ++ +    +++ H + +   ++ V
Sbjct: 30  GMHVWLPYGWQLMRNIDEYFRKVFTEHKHQEVYFPLLIPETEFKKEAEHIEGFENEVYWV 89

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
                   D++   ++P +      +F+  ++S+ +LP+R+ +  +V+R E +      +
Sbjct: 90  THGGLDPLDVK-LVVRPTSETAMYPMFSLWIRSHADLPLRIFQIVNVFRYE-TKQTRTFI 147

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALW 441
           RVR     ++H      +   E +K +   I I+K     K+  KL+             
Sbjct: 148 RVREVHFFESHTAHATAEESEEQIKDN---IEIWK-----KVADKLA------------- 186

Query: 442 DDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDF- 500
                 +  VL  ++ +  D+         GA Y    E I+    GR  Q  TI   F 
Sbjct: 187 ------LPYVL--VRKTDWDKF-------PGAAYSIGAETIMPS--GRTLQIATIHQYFQ 229

Query: 501 NLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAI 556
           N    +   Y+       +   +H+  FG  ER +G ++     N    LP  ++PIQ +
Sbjct: 230 NFSKPYGIEYLKEDGTHDY---VHQTTFGMSERLVGAIVGIHGDNRGLILPPEIAPIQVV 286

Query: 557 VTTITS----SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
           +  I +      ++ A++I N LK  +     D  N T  YK  +  +K +P+ +  G +
Sbjct: 287 IVPIVNKNKEGILQEARKIENELKELYRVHLDDRDNYTPGYKFYDWELKGVPLRLEIGPR 346

Query: 613 EASERSIGIRR 623
           +  +  + + R
Sbjct: 347 DLEKGQVVLVR 357


>gi|86149024|ref|ZP_01067256.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|85840382|gb|EAQ57639.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CF93-6]
          Length = 569

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/139 (23%), Positives = 66/139 (47%), Gaps = 7/139 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           GSG+  +   G ++   + + ++ ++ K   +E+N   +    LWQ+SG ++ +   +  
Sbjct: 37  GSGLYNFLPLGKRVLDKIKNIVKEEMDKAGAQEVNLSFITPASLWQESGRYNVFGKELLR 96

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            K   +       F L P +    +++  + + SY++LP+ L + G  +R+E      GL
Sbjct: 97  FKDRKEN-----EFVLGPTHEEAMLSLVKNKITSYKQLPLHLYQIGLKFRDEARPRF-GL 150

Query: 381 MRVRGFTQDDAHVFCTKEQ 399
           +R R F   D + F   E+
Sbjct: 151 LRCREFLMKDGYSFHANEE 169


>gi|310658795|ref|YP_003936516.1| alanyl-tRNA synthetase [Clostridium sticklandii DSM 519]
 gi|308825573|emb|CBH21611.1| alanyl-tRNA synthetase [Clostridium sticklandii]
          Length = 882

 Score = 51.2 bits (121), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 38/153 (24%), Positives = 74/153 (48%), Gaps = 21/153 (13%)

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSDE 118
           E++  E  R      H+C H++ +A++ +        G ++ D    +DF   +P +S++
Sbjct: 553 ELVVDEKLRKSTQRNHTCTHLLHKALRQVLGAHIHQAGSLVSDTRLRFDFTHFEPITSEQ 612

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTL 173
           L+QIE  + E I +  P   + ++ E+A++     LF+ K E             +NV +
Sbjct: 613 LSQIENMVNEAIFKAYPVKVEVMNIEEAKKSGAMALFDEKYE-------------DNVRV 659

Query: 174 YRQGEW-FDLCRGPHVRSTGQVKKFFKLMKVAG 205
              GE+  +LC G HV ++  +   FK++  +G
Sbjct: 660 VSVGEFSTELCGGTHVSNSSDI-GMFKILSESG 691


>gi|118590019|ref|ZP_01547423.1| prolyl-tRNA synthetase [Stappia aggregata IAM 12614]
 gi|118437516|gb|EAV44153.1| prolyl-tRNA synthetase [Stappia aggregata IAM 12614]
          Length = 442

 Score = 51.2 bits (121), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 52/210 (24%), Positives = 86/210 (40%), Gaps = 30/210 (14%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEE----- 293
           +E+E   HR + R      I +  +G+  W   G K+         RKI+   EE     
Sbjct: 16  KEAEIVSHRLMLRAG---MIRQQSAGIYSWLPLGLKVL--------RKIERIVEEEQARA 64

Query: 294 ----INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
               +  P +    LW++SG +D+Y   M  +     T +  R     P N      +F 
Sbjct: 65  GAIQLLMPTIQSADLWRESGRYDAYGKEMLRI-----TDRHERDMLFGPTNEEMITDIFR 119

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIH 408
             ++SY++LP+ L      +R+E      G+MR R F   DA+ F   KE   +   ++ 
Sbjct: 120 GYVRSYKDLPLNLYHIQWKFRDEVRPRF-GVMRGREFLMKDAYSFDLDKESARHAYNRMF 178

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSD 438
              +  +   G + I +K  T P   +G D
Sbjct: 179 VAYLRTFARMGLKAIPMKADTGP---IGGD 205


>gi|328885400|emb|CCA58639.1| Prolyl-tRNA synthetase [Streptomyces venezuelae ATCC 10712]
          Length = 566

 Score = 51.2 bits (121), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 40/174 (22%), Positives = 80/174 (45%), Gaps = 18/174 (10%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R     ++    +G+  W   G K+   +   +R ++     +E+  P 
Sbjct: 23  DAEVLSHKLLVRA---GYVRRTAAGIWSWLPLGKKVLSNIERIVREEMDAIGAQEVTLPA 79

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L +  ++ +G WD Y A +F  +  D    D        +  P H  +F   +K    S
Sbjct: 80  LLPREPYEATGRWDEYGAELF--RLQDRKGGDY-------LLGPTHEEIFTLLVKDQCSS 130

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
           Y++LPV L +  + +R+E +    G++R R F   D++ F T+++   +   +H
Sbjct: 131 YKDLPVILYQIQNKFRDE-ARPRAGILRGREFLMKDSYSFDTEDEGLAQSYALH 183


>gi|317504468|ref|ZP_07962446.1| phosphoribulokinase [Prevotella salivae DSM 15606]
 gi|315664411|gb|EFV04100.1| phosphoribulokinase [Prevotella salivae DSM 15606]
          Length = 553

 Score = 51.2 bits (121), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 38/180 (21%), Positives = 80/180 (44%), Gaps = 2/180 (1%)

Query: 19  VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIRHSC 77
           + +T SDV      +L    +   +N KV  +   V     +E +  + P +      + 
Sbjct: 20  IGSTLSDVFSQFKLTLPYGPICAKVNNKVEGMHYRVYHSKDVEFLNMQAPSASRNYTRTL 79

Query: 78  AHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFL 137
             ++ +AV  ++P+  V I   + +G+Y +     P +  ++  I +++QEII    P  
Sbjct: 80  FFVLCKAVHDLYPKSYVIIDIPVSNGYYVNLQLGHPVTPTDVECIHQRIQEIIDAHLPIK 139

Query: 138 KQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
           +  +  E+A  +F  + +  K ++LES   +   T Y   ++ D   G  + +T ++  F
Sbjct: 140 RFEVPTEQAITMFRERGDEAKAKLLES-AGRLYTTYYEIDDYIDFYYGSLLTNTKKLYLF 198


>gi|229009880|ref|ZP_04167100.1| Prolyl-tRNA synthetase 2 [Bacillus mycoides DSM 2048]
 gi|228751498|gb|EEM01304.1| Prolyl-tRNA synthetase 2 [Bacillus mycoides DSM 2048]
          Length = 476

 Score = 51.2 bits (121), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 80/396 (20%), Positives = 156/396 (39%), Gaps = 61/396 (15%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHLWQ-QSGHWDSYRANMFAV 321
           G +     G+ +++ +   M  K+K+  +E +  P  + + L Q +  H + +   +  V
Sbjct: 37  GCMILRPYGYALWENMQKVMDEKLKESGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWV 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
               D  K      ++P +       F+  ++SY +LP    ++ SV R E +      +
Sbjct: 97  THGGDE-KLAERLCIRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKT--TRPFL 153

Query: 382 RVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           R   F   + H +  T E+   E L I NL  +  +++    ++    T  EK  G+ A 
Sbjct: 154 RTTEFLWQEGHTIHETAEESQIETLNILNLYAAFCEEYLAIPVIKGQKTEKEKFAGAKAT 213

Query: 441 WDDAENIMKGVLDTIKNSSQD--RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
           +            TI++   D   + TG     G  +   F+    D  G+ WQ      
Sbjct: 214 Y------------TIESLMHDGKALQTGTSHNFGTNFSEAFDIKFLDRNGK-WQ------ 254

Query: 499 DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQ 554
                                   +H+  +G   R IG +I     N    +P  ++P+Q
Sbjct: 255 -----------------------YVHQTSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQ 291

Query: 555 AIVTTITS---SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
            ++  I       +E A E+   ++     ++ D  N+T  +K  E+ +K +PI +  G 
Sbjct: 292 VVIVPIAQHKEGVLEKATELQGRIQKV-ARVKIDASNKTPGWKFNEYEMKGVPIRLEVGP 350

Query: 612 KEASERSIGIRRFGSTTTQKVS---LLDAIPILTKE 644
           K+  +  + + R  +   + +S   L + IP+L +E
Sbjct: 351 KDIEKNQVVLVRRDTKEKEFISMDQLEERIPVLLEE 386


>gi|229015779|ref|ZP_04172758.1| Prolyl-tRNA synthetase 2 [Bacillus cereus AH1273]
 gi|229021987|ref|ZP_04178545.1| Prolyl-tRNA synthetase 2 [Bacillus cereus AH1272]
 gi|228739314|gb|EEL89752.1| Prolyl-tRNA synthetase 2 [Bacillus cereus AH1272]
 gi|228745536|gb|EEL95559.1| Prolyl-tRNA synthetase 2 [Bacillus cereus AH1273]
          Length = 476

 Score = 51.2 bits (121), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 77/383 (20%), Positives = 149/383 (38%), Gaps = 58/383 (15%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHLWQ-QSGHWDSYRANMFAV 321
           G +     G+ +++ +   M  K+K+  +E +  P  + + L Q +  H + +   +  V
Sbjct: 37  GCMILRPYGYALWENMQKVMDEKLKESGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWV 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
               D  K      ++P +       F+  ++SY +LP    ++ SV R E +      +
Sbjct: 97  THGGDE-KLAERLCIRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKT--TRPFL 153

Query: 382 RVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           R   F   + H +  T E+   E L I NL  S  +D+    ++    T  EK  G+ A 
Sbjct: 154 RTTEFLWQEGHTIHETAEESQAETLNILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKAT 213

Query: 441 WDDAENIMKGVLDTIKNSSQD--RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
           +            TI++   D   + TG     G  +   F+    D  G+ WQ      
Sbjct: 214 Y------------TIESLMHDGKALQTGTSHNFGTNFSEAFDIKFLDRNGK-WQ------ 254

Query: 499 DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQ 554
                                   +H+  +G   R IG +I     N    +P  ++P+Q
Sbjct: 255 -----------------------YVHQTSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQ 291

Query: 555 AIVTTITS---SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
            ++  I       +E A E+   ++     ++ D  N+T  +K  E+ +K +PI +  G 
Sbjct: 292 VVIVPIAQHKEGVLEKATELQGRIQKV-ARVKIDASNKTPGWKFNEYEMKGVPIRLEVGP 350

Query: 612 KEASERSIGIRRFGSTTTQKVSL 634
           K+  +  + + R  +   + +S+
Sbjct: 351 KDIEKNQVVLVRRDTKEKEFISM 373


>gi|254510259|ref|ZP_05122326.1| alanyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11]
 gi|221533970|gb|EEE36958.1| alanyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11]
          Length = 890

 Score = 51.2 bits (121), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 37/148 (25%), Positives = 66/148 (44%), Gaps = 5/148 (3%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPI-IEDGFYYDFDKEQPFSS 116
           ++E+      R+     HS  H++ EA++    +     G +   D   +DF   +  + 
Sbjct: 550 AVELEVDHARRTAIRANHSATHLLHEALRETLGDHVAQRGSLNASDRLRFDFSHSKALTL 609

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESK--KEAYKVEILESIPAKENVTLY 174
           DE+ ++E+++   I ++S    + ++ + AREL       E Y  E+      K      
Sbjct: 610 DEMKKVEREVNAFIRQNSTVETRIMTPDDARELGAQALFGEKYGDEVRVVSMGKATTGKG 669

Query: 175 RQGE-W-FDLCRGPHVRSTGQVKKFFKL 200
           + GE W  +LC G HVR TG +  F  L
Sbjct: 670 QDGETWSIELCGGTHVRQTGDIGTFVVL 697


>gi|148925913|ref|ZP_01809600.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8486]
 gi|145844899|gb|EDK22003.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8486]
          Length = 576

 Score = 51.2 bits (121), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/139 (23%), Positives = 66/139 (47%), Gaps = 7/139 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           GSG+  +   G ++   + + ++ ++ K   +E+N   +    LWQ+SG ++ +   +  
Sbjct: 44  GSGLYNFLPLGKRVLDKIKNIVKEEMDKAGAQEVNLSFITPASLWQESGRYNVFGKELLR 103

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            K   +       F L P +    +++  + + SY++LP+ L + G  +R+E      GL
Sbjct: 104 FKDRKEN-----EFVLGPTHEEAMLSLVKNKITSYKQLPLHLYQIGLKFRDEARPRF-GL 157

Query: 381 MRVRGFTQDDAHVFCTKEQ 399
           +R R F   D + F   E+
Sbjct: 158 LRCREFLMKDGYSFHANEE 176


>gi|83949530|ref|ZP_00958263.1| prolyl-tRNA synthetase [Roseovarius nubinhibens ISM]
 gi|83837429|gb|EAP76725.1| prolyl-tRNA synthetase [Roseovarius nubinhibens ISM]
          Length = 452

 Score = 51.2 bits (121), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 42/185 (22%), Positives = 81/185 (43%), Gaps = 15/185 (8%)

Query: 258 IAEDGSGVIFWHRKGWKIF---QTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSY 314
           I +  +G+  W   G+K+    +T++   ++++   +  +  P +    LW++SG +D+Y
Sbjct: 32  IKQSSAGIYSWLPLGYKVLRNIETIVHEEQQRV--GHIPMLMPTLQSADLWRESGRYDAY 89

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
              M  ++   D     R     P N      +F   + SY++LP+ L      +R+E  
Sbjct: 90  GPEMLRIRDRQD-----RDMLFGPTNEEMITDIFRSHVSSYKDLPLTLYHIQWKFRDEIR 144

Query: 375 GSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
               G+MR R F   D + F  TKE   +   +     +  Y+  G + I ++  + P  
Sbjct: 145 PRF-GVMRGREFLMKDGYNFDLTKEDALHAYNRHLVSYLRTYERMGLQAIPMRADSGP-- 201

Query: 434 RVGSD 438
            +G D
Sbjct: 202 -IGGD 205


>gi|319783000|ref|YP_004142476.1| prolyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317168888|gb|ADV12426.1| prolyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 442

 Score = 51.2 bits (121), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 84/204 (41%), Gaps = 20/204 (9%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+E   HR + R      I + G G   W   G ++   +   +R  + +    EI  P 
Sbjct: 17  EAEIVSHRLMLRAG---MIRQQGQGSFSWLPLGKRVLDKVCRIIREEQDRAGALEILMPT 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW++SG +D Y   M  +K   D     R     P N      +    +KSY++L
Sbjct: 74  IQSADLWRESGRYDDYGKEMLRIKDRQD-----RDMLYGPTNEEVVTEIVRAYVKSYKDL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKD 417
           P+ L      +R+E      G+MR R F   DA+ F   +  F      +N + +S  + 
Sbjct: 129 PLNLYHIQWKFRDEVRPRF-GVMRSREFLMKDAYSF---DLDFEGARAAYNRMFVSYLRT 184

Query: 418 F---GFEKIMVKLSTRPEKRVGSD 438
           F   G + I ++  T P   +G D
Sbjct: 185 FTRMGLQAIPMRADTGP---IGGD 205


>gi|301052111|ref|YP_003790322.1| prolyl-tRNA synthetase [Bacillus anthracis CI]
 gi|300374280|gb|ADK03184.1| prolyl-tRNA synthetase [Bacillus cereus biovar anthracis str. CI]
          Length = 476

 Score = 51.2 bits (121), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 84/396 (21%), Positives = 152/396 (38%), Gaps = 61/396 (15%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAV 321
           G +     G+ +++ +   M  K+K   +E +  P  + + L Q +  H + +   +  V
Sbjct: 37  GCMILRPYGYALWENMQKVMDEKLKATGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWV 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
               D  K      ++P +       F+  ++SY +LP    ++ SV R E +      +
Sbjct: 97  THGGDE-KLAERLCVRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKT--TRPFL 153

Query: 382 RVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           R   F   + H +  T E+   E L I NL  S  +D+    ++    T  EK  G+ A 
Sbjct: 154 RTTEFLWQEGHTIHETAEESQAETLNILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKAT 213

Query: 441 WDDAENIMKGVLDTIKNSSQD--RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
           +            TI++   D   + TG     G  +   F+    D  G+ WQ      
Sbjct: 214 Y------------TIESLMHDGKALQTGTSHNFGTNFSEAFDIKFLDRTGK-WQ------ 254

Query: 499 DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQ 554
                                   +H+  +G   R IG +I     N    +P  ++P+Q
Sbjct: 255 -----------------------YVHQTSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQ 291

Query: 555 AIVTTITSSAVEYAQEIANLLKSH---HLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
            ++  I     E     A  L+ H      ++ D  N+T  +K  E+ +K IPI +  G 
Sbjct: 292 VVIVPIAQHK-EGVLAKATELQGHIQKVARVKIDASNKTPGWKFNEYEMKGIPIRLEVGP 350

Query: 612 KEASERSIGIRRFGSTTTQKVS---LLDAIPILTKE 644
           K+  +  + + R  +   + +S   L + IP L +E
Sbjct: 351 KDIEKNQVVLVRRDTKEKEFISMDQLEERIPALLEE 386


>gi|229108063|ref|ZP_04237688.1| Prolyl-tRNA synthetase 2 [Bacillus cereus Rock1-15]
 gi|229143182|ref|ZP_04271614.1| Prolyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST24]
 gi|296501219|ref|YP_003662919.1| prolyl-tRNA synthetase [Bacillus thuringiensis BMB171]
 gi|228640263|gb|EEK96661.1| Prolyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST24]
 gi|228675338|gb|EEL30557.1| Prolyl-tRNA synthetase 2 [Bacillus cereus Rock1-15]
 gi|296322271|gb|ADH05199.1| prolyl-tRNA synthetase [Bacillus thuringiensis BMB171]
          Length = 476

 Score = 51.2 bits (121), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 84/396 (21%), Positives = 153/396 (38%), Gaps = 61/396 (15%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHLWQ-QSGHWDSYRANMFAV 321
           G +     G+ +++ +   M  K+K+  +E +  P  + + L Q +  H + +   +  V
Sbjct: 37  GCMILRPYGYALWENMQKVMDEKLKETGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWV 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
               D  K      ++P +       F+  ++SY +LP    ++ SV R E +      +
Sbjct: 97  THGGDE-KLAERLCVRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKT--TRPFL 153

Query: 382 RVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           R   F   + H +  T E+   E L I NL  S  +D+    ++    T  EK  G+ A 
Sbjct: 154 RTTEFLWQEGHTIHETAEESQAETLNILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKAT 213

Query: 441 WDDAENIMKGVLDTIKNSSQD--RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
           +            TI++   D   + TG     G  +   F+    D  G+ WQ      
Sbjct: 214 Y------------TIESLMHDGKALQTGTSHNFGTNFSEAFDIKFLDRNGK-WQ------ 254

Query: 499 DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQ 554
                                   +H+  +G   R IG +I     N    +P  ++P+Q
Sbjct: 255 -----------------------YVHQTSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQ 291

Query: 555 AIVTTITSSAVEYAQEIANLLKSH---HLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
            ++  I     E     A  L++H      ++ D  N+T  +K  E+ +K IPI +  G 
Sbjct: 292 VVIVPIAQHK-EGVLAKATELQAHIQKVARVKIDASNKTPGWKFNEYEMKGIPIRLEVGP 350

Query: 612 KEASERSIGIRRFGSTTTQKV---SLLDAIPILTKE 644
           K+  +  + + R  +   + V    L + IP L +E
Sbjct: 351 KDIEKNQVVLVRRDTKEKEFVPMDQLEERIPALLEE 386


>gi|254167402|ref|ZP_04874254.1| prolyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|197623665|gb|EDY36228.1| prolyl-tRNA synthetase [Aciduliprofundum boonei T469]
          Length = 465

 Score = 51.2 bits (121), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 75/371 (20%), Positives = 155/371 (41%), Gaps = 54/371 (14%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL-DQHLWQQSGHWDSYRANMFAV 321
           G+  W   GW++ + +  Y R+   +  ++E+  P ++ +    +++ H + +   ++ V
Sbjct: 30  GMHVWLPYGWQLMRNIDEYFRKVFTEHKHQEVYFPLLIPETEFKKEAEHIEGFENEVYWV 89

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
                   D++   ++P +      +F+  ++S+ +LP+R+ +  +V+R E +      +
Sbjct: 90  THGGLDPLDVK-LVVRPTSETAMYPMFSLWIRSHADLPLRIFQIVNVFRYE-TKQTRTFI 147

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALW 441
           RVR     ++H      +   E +K +   I I+K     K+  KL+             
Sbjct: 148 RVREVHFFESHTAHATAEESEEQIKDN---IEIWK-----KVADKLA------------- 186

Query: 442 DDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDF- 500
                 +  VL  ++ +  D+         GA Y    E I+    GR  Q  TI   F 
Sbjct: 187 ------LPYVL--VRKTDWDKF-------PGAAYSIGAETIMPS--GRTLQIATIHQYFQ 229

Query: 501 NLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAI 556
           N    +   Y+       +   +H+  FG  ER +G ++     N    LP  ++PIQ +
Sbjct: 230 NFSKPYGIEYLKEDGTHDY---VHQTTFGMSERLVGAIVGIHGDNRGLILPPEIAPIQVV 286

Query: 557 VTTITS----SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
           +  I +      ++ A++I N LK  +     D  N T  YK  +  +K +P+ +  G +
Sbjct: 287 IVPIVNKNKEGILQEARKIENELKELYRVHLDDRDNYTPGYKFYDWELKGVPLRLEIGPR 346

Query: 613 EASERSIGIRR 623
           +  +  + + R
Sbjct: 347 DLEKGQVVLVR 357


>gi|308235415|ref|ZP_07666152.1| prolyl-tRNA synthetase [Gardnerella vaginalis ATCC 14018]
 gi|311114822|ref|YP_003986043.1| proline--tRNA ligase [Gardnerella vaginalis ATCC 14019]
 gi|310946316|gb|ADP39020.1| proline--tRNA ligase [Gardnerella vaginalis ATCC 14019]
          Length = 602

 Score = 51.2 bits (121), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 80/183 (43%), Gaps = 20/183 (10%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
           +I +   GV  W   G K+   + + +R +I     +E++ P +L +  ++ +  W+ Y 
Sbjct: 29  YIRKSAPGVWTWLPLGLKVLNKVQAIIREEINGIGAQEVHFPALLPREPYEATNRWEEYG 88

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----SYRELPVRLAEFGSVYRN 371
            N+F +K  D    D        +  P H  VF   +K    SY++LPV L +  + YR+
Sbjct: 89  DNIFRLK--DRHEADY-------LLAPTHEEVFTLLVKDMYSSYKDLPVTLYQIQTKYRD 139

Query: 372 E--PSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC-LKIHNLIISIYKDFGFEKIMVKLS 428
           E  P     GL+R R F   DA+ F   E       ++       I+   G + ++V   
Sbjct: 140 EFRPRA---GLIRGREFIMQDAYSFSIDEDGLKSAYVEERAAYARIFDRLGIKYVIVHAV 196

Query: 429 TRP 431
           + P
Sbjct: 197 SGP 199


>gi|319788022|ref|YP_004147497.1| prolyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1]
 gi|317466534|gb|ADV28266.1| prolyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1]
          Length = 565

 Score = 51.2 bits (121), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 37/179 (20%), Positives = 75/179 (41%), Gaps = 11/179 (6%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           +G+  W   G ++ + + + +R ++ +    E+  P +  + LW+++G W  +   +  +
Sbjct: 37  AGLYTWTPLGLRVLRKVEAVVREEMNRAGAVELQLPTIQPRELWEETGRWGKFGGQLLKI 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           K   +       +   P             L SY++LPV   +  + +R+E      G+M
Sbjct: 97  KDRKEA-----EYCFSPTAEEAITDFARQELSSYKQLPVNFYQIHTKFRDEIRPRF-GVM 150

Query: 382 RVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDA 439
           R R F   DA+ F  + E +  E   +    I ++   G E   V+  +     +G DA
Sbjct: 151 RAREFLMKDAYSFHVSDEDLAREYENMKAAYIRVFGRLGLEFRAVQADS---GAIGGDA 206


>gi|229131392|ref|ZP_04260291.1| Prolyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST196]
 gi|228652083|gb|EEL08021.1| Prolyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST196]
          Length = 476

 Score = 51.2 bits (121), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 80/396 (20%), Positives = 156/396 (39%), Gaps = 61/396 (15%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHLWQ-QSGHWDSYRANMFAV 321
           G +     G+ +++ +   M  K+K+  +E +  P  + + L Q +  H + +   +  V
Sbjct: 37  GCMILRPYGYALWENMQKVMDEKLKESGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWV 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
               D  K      ++P +       F+  ++SY +LP    ++ SV R E +      +
Sbjct: 97  THGGDE-KLAERLCIRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKT--TRPFL 153

Query: 382 RVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           R   F   + H +  T E+   E L I NL  +  +++    ++    T  EK  G+ A 
Sbjct: 154 RTTEFLWQEGHTIHETAEESQIETLNILNLYAAFCEEYLAIPVIKGQKTEKEKFAGAKAT 213

Query: 441 WDDAENIMKGVLDTIKNSSQD--RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
           +            TI++   D   + TG     G  +   F+    D  G+ WQ      
Sbjct: 214 Y------------TIESLMHDGKALQTGTSHNFGTNFSEAFDIKFLDRNGK-WQ------ 254

Query: 499 DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQ 554
                                   +H+  +G   R IG +I     N    +P  ++P+Q
Sbjct: 255 -----------------------YVHQTSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQ 291

Query: 555 AIVTTITS---SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
            ++  I       +E A E+   ++     ++ D  N+T  +K  E+ +K +PI +  G 
Sbjct: 292 VVIVPIAQHKEGVLEKATELQGRIQKV-ARVKIDASNKTPGWKFNEYEMKGVPIRLEVGP 350

Query: 612 KEASERSIGIRRFGSTTTQKVS---LLDAIPILTKE 644
           K+  +  + + R  +   + +S   L + IP+L +E
Sbjct: 351 KDIEKNQVVLVRRDTKEKEFISMDQLEERIPVLLEE 386


>gi|92114261|ref|YP_574189.1| prolyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043]
 gi|114152183|sp|Q1QVL8|SYP_CHRSD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|91797351|gb|ABE59490.1| prolyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043]
          Length = 573

 Score = 51.2 bits (121), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/133 (24%), Positives = 62/133 (46%), Gaps = 7/133 (5%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG+  W   G +  + + + +R ++ +   +E+  P +    LWQ+SG WD Y   +  +
Sbjct: 37  SGLYTWLPLGLRTLRKVENIVREEMNRAGAQEVLMPSIQPAELWQESGRWDQYGNLLLRI 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           +      +  R F   P +      +  + ++SY++LP    +  + +R+E      G+M
Sbjct: 97  RD-----RHERDFCYGPTHEEVITDLVRNEIRSYKQLPSNFYQIQTKFRDETRPRF-GVM 150

Query: 382 RVRGFTQDDAHVF 394
           R R F   DA+ F
Sbjct: 151 RAREFIMKDAYSF 163


>gi|308068985|ref|YP_003870590.1| Prolyl-tRNA synthetase class II (Proline--tRNA ligase class II)
           [Paenibacillus polymyxa E681]
 gi|305858264|gb|ADM70052.1| Prolyl-tRNA synthetase class II (Proline--tRNA ligase class II)
           [Paenibacillus polymyxa E681]
          Length = 579

 Score = 51.2 bits (121), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +    LWQ+SG +D Y   +  ++   D     R FAL P +     ++  + +
Sbjct: 68  ELLMPVLQPTELWQESGRYDVYGPELMRLQDRHD-----REFALGPTHEEVITSLIRNEV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
            SYR+LPV L +  + +R+E      GL+R R F   DA+ F
Sbjct: 123 NSYRKLPVTLYQIQTKFRDERRPRF-GLLRSREFLMKDAYSF 163


>gi|229051703|ref|ZP_04195164.1| Prolyl-tRNA synthetase 2 [Bacillus cereus AH676]
 gi|228721660|gb|EEL73143.1| Prolyl-tRNA synthetase 2 [Bacillus cereus AH676]
          Length = 476

 Score = 51.2 bits (121), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 84/396 (21%), Positives = 153/396 (38%), Gaps = 61/396 (15%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHLWQ-QSGHWDSYRANMFAV 321
           G +     G+ +++ +   M  K+K+  +E +  P  + + L Q +  H + +   +  V
Sbjct: 37  GCMILRPYGYALWENMQKVMDEKLKETGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWV 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
               D  K      ++P +       F+  ++SY +LP    ++ SV R E +      +
Sbjct: 97  THGGDE-KLAERLCVRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKT--TRPFL 153

Query: 382 RVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           R   F   + H +  T E+   E L I NL  S  +D+    ++    T  EK  G+ A 
Sbjct: 154 RTTEFLWQEGHTIHETAEESQAETLNILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKAT 213

Query: 441 WDDAENIMKGVLDTIKNSSQD--RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
           +            TI++   D   + TG     G  +   F+    D  G+ WQ      
Sbjct: 214 Y------------TIESLMHDGKALQTGTSHNFGTNFSEAFDIKFLDRNGK-WQ------ 254

Query: 499 DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQ 554
                                   +H+  +G   R IG +I     N    +P  ++P+Q
Sbjct: 255 -----------------------YVHQTSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQ 291

Query: 555 AIVTTITSSAVEYAQEIANLLKSH---HLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
            ++  I     E     A  L++H      ++ D  N+T  +K  E+ +K IPI +  G 
Sbjct: 292 VVIVPIAQHK-EGVLAKATELQAHIQKVARVKIDASNKTPGWKFNEYEMKGIPIRLEVGP 350

Query: 612 KEASERSIGIRRFGSTTTQKV---SLLDAIPILTKE 644
           K+  +  + + R  +   + V    L + IP L +E
Sbjct: 351 KDIEKNQVVLVRRDTKEKEFVPMDQLEERIPALLEE 386


>gi|91761979|ref|ZP_01263944.1| prolyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1002]
 gi|91717781|gb|EAS84431.1| prolyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1002]
          Length = 444

 Score = 51.2 bits (121), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 39/161 (24%), Positives = 71/161 (44%), Gaps = 10/161 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E++ + H+ + R   +  I +  +G+  W   G+K+ + +   +R +      +EI  P 
Sbjct: 17  EAKIKSHQLMLR---VGMIKQSSAGIYSWLPLGFKVMKKIEQIVREEQNTIGAQEILMPT 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    +W++SG +D Y   M  +K      +  R     P N      +F   +KSY+ L
Sbjct: 74  IQPSDIWKESGRYDDYGDEMLRIKD-----RQGREMLYGPTNEELVTDIFRSSVKSYKSL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQ 399
           P  L      +R+E      G+MR R F   DA+ F   ++
Sbjct: 129 PQLLYHIQWKFRDEVRPRF-GIMRGREFYMKDAYSFDVNDE 168


>gi|91785266|ref|YP_560472.1| prolyl-tRNA synthetase [Burkholderia xenovorans LB400]
 gi|123358448|sp|Q13U19|SYP_BURXL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|91689220|gb|ABE32420.1| Prolyl-tRNA synthetase [Burkholderia xenovorans LB400]
          Length = 578

 Score = 51.2 bits (121), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 58/130 (44%), Gaps = 7/130 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P V    LWQ+SG W+ Y   +   K  D    D   F + P +      +  + +
Sbjct: 68  ELLMPAVQPAELWQESGRWEKYGPELLRFK--DRKQSD---FVIGPTHEEVVTDIARNQI 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLI 411
           KSYR+LPV   +  + +R+E      G+MR R F   DA+ F        E   K+++  
Sbjct: 123 KSYRQLPVNFYQVQTKFRDEIRPRF-GVMRGREFIMKDAYSFDKDMDGLRESYRKMYDAY 181

Query: 412 ISIYKDFGFE 421
           + I+   G +
Sbjct: 182 VRIFTRLGLD 191


>gi|68536224|ref|YP_250929.1| prolyl-tRNA synthetase [Corynebacterium jeikeium K411]
 gi|260578924|ref|ZP_05846827.1| proline--tRNA ligase [Corynebacterium jeikeium ATCC 43734]
 gi|114152185|sp|Q4JV46|SYP_CORJK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|68263823|emb|CAI37311.1| proS [Corynebacterium jeikeium K411]
 gi|258602898|gb|EEW16172.1| proline--tRNA ligase [Corynebacterium jeikeium ATCC 43734]
          Length = 596

 Score = 51.2 bits (121), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 38/170 (22%), Positives = 76/170 (44%), Gaps = 10/170 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +  +A    GV  W   G ++ + + + +R ++     +EI+ P 
Sbjct: 19  DAEVPSHKLLVRAGYIRRVA---PGVYSWLPLGLRVLRNIEAVVREEMNAIGAQEISFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  +  +G W  Y   +F +K   +       + L P +     +V      SY++ 
Sbjct: 76  LLPREPYDTTGRWVEYGDALFRLKDRKNA-----DYLLGPTHEEMFTSVVKSEYNSYKDF 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
           PV L +  + YR+E      G++R R F   D++ F   ++   E  ++H
Sbjct: 131 PVILYQVQTKYRDEER-PRAGILRGREFIMKDSYSFNMDDEGLEESYQLH 179


>gi|224373093|ref|YP_002607465.1| prolyl-tRNA synthetase [Nautilia profundicola AmH]
 gi|254782910|sp|B9LA07|SYP_NAUPA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|223588823|gb|ACM92559.1| prolyl-tRNA synthetase [Nautilia profundicola AmH]
          Length = 574

 Score = 51.2 bits (121), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 59/127 (46%), Gaps = 11/127 (8%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           +E+    V    LW+++G    Y   +  +K   D     ++F L P N    V +    
Sbjct: 67  QEVMLTFVTPNELWEETGRAKKYGKELLRIKDRKD-----QSFVLAPTNEESVVDLVRGT 121

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNL 410
           +KSY++LPV L +    +R+E      GL+R R F   DA+ F  T+E +  E     NL
Sbjct: 122 IKSYKQLPVNLYQINLKFRDEARPRF-GLLRGREFIMKDAYSFHATEEDLDRE----FNL 176

Query: 411 IISIYKD 417
           +   YK+
Sbjct: 177 MEETYKN 183


>gi|156548542|ref|XP_001603352.1| PREDICTED: similar to ENSANGP00000016734 [Nasonia vitripennis]
          Length = 339

 Score = 51.2 bits (121), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 92/189 (48%), Gaps = 20/189 (10%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS----IEIITPEDPRSL-AVIRH 75
           +T  D A+ IS  + K A    ++G   D+  P+ +      + ++ P+D  +L      
Sbjct: 80  STPDDCAQHISEGIHKTAALALVDGVPWDMHKPLTKDCEIKFLTMLMPKDSPALNPAFWR 139

Query: 76  SCAHIMAEAVQSIWPE-VQVAIG----PIIEDG-FYYDFDKEQP---FSSDELAQIEKKM 126
           +C+ IM   + S + + +Q+ +     P ++ G F YD   + P    ++ +L  +  + 
Sbjct: 140 TCSLIMGAMIDSAFKDDIQLYLHSFPRPNLKSGSFTYDVVLDLPDWLPTAAQLRAMSAQF 199

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN---VTLYRQGEWFDLC 183
            +I  R+ P  +  +S E A ++F+     +K + +  I AK N   +TLYR GE  D+ 
Sbjct: 200 VKIATRNLPVERLQVSEELALDMFQDN--PFKSKQIPDI-AKSNEGRITLYRIGEHIDIS 256

Query: 184 RGPHVRSTG 192
           +GP V +TG
Sbjct: 257 KGPMVGNTG 265


>gi|52079348|ref|YP_078139.1| threonyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52784711|ref|YP_090540.1| hypothetical protein BLi00937 [Bacillus licheniformis ATCC 14580]
 gi|319646868|ref|ZP_08001097.1| hypothetical protein HMPREF1012_02134 [Bacillus sp. BT1B_CT2]
 gi|52002559|gb|AAU22501.1| threonyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52347213|gb|AAU39847.1| conserved hypothetical protein [Bacillus licheniformis ATCC
          14580]
 gi|317391456|gb|EFV72254.1| hypothetical protein HMPREF1012_02134 [Bacillus sp. BT1B_CT2]
          Length = 441

 Score = 51.2 bits (121), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 46/73 (63%), Gaps = 2/73 (2%)

Query: 4  DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEII 62
           I++  PDGS++ F   A+  DVA SIS  L + AVA  +NGK+ DLS P+++G+ +EI+
Sbjct: 2  SIRIKLPDGSVREFEEEASIEDVAASISCGL-EHAVAGKLNGKLVDLSTPLQDGALVEIV 60

Query: 63 TPEDPRSLAVIRH 75
          T +      ++R 
Sbjct: 61 TRDSAEGQKIVRE 73


>gi|33861065|ref|NP_892626.1| prolyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris
           str. CCMP1986]
 gi|81835597|sp|Q7V2H0|SYP_PROMP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|33639797|emb|CAE18967.1| Prolyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris
           str. CCMP1986]
          Length = 600

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 40/174 (22%), Positives = 84/174 (48%), Gaps = 11/174 (6%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDY-EEINTPQVLDQHLWQQSGHWDSYR 315
           +I    SG+  +     ++ + + + + +++ + Y  ++  PQ+    LW++S  W+ Y 
Sbjct: 32  YIRRVNSGIYAYMPIMLRVIEKISTIIEKELNNIYCSKLLLPQLHPAELWKKSERWEGYT 91

Query: 316 AN---MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE 372
           A    MF +K      +  + F L P +     ++ +  + SY++LP+   +  + +R+E
Sbjct: 92  AGEGIMFNLKD-----RQGKEFGLAPTHEEVITSIASEMINSYKQLPLCFYQIQTKFRDE 146

Query: 373 PSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
                 GLMR R F   DA+ F  +KE + +   K+     +I+K+ G + + V
Sbjct: 147 IRPRF-GLMRSREFIMKDAYSFHSSKEDLASFYEKMEKAYENIFKNCGLDTVGV 199


>gi|229194773|ref|ZP_04321562.1| Prolyl-tRNA synthetase 2 [Bacillus cereus m1293]
 gi|228588716|gb|EEK46745.1| Prolyl-tRNA synthetase 2 [Bacillus cereus m1293]
          Length = 502

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 90/452 (19%), Positives = 173/452 (38%), Gaps = 70/452 (15%)

Query: 212 SNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRK 271
             R  L  + G      +E  Q +  +EE   + +  + ++ +L   +    G +     
Sbjct: 12  GTRAFLYFLEGGRLTMAKEQVQAITKMEEDFAQWYTDIVKKAELVDYS-SVKGCMILRPY 70

Query: 272 GWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIK 329
           G+ +++ +   M  K+K   +E +  P  + + L Q +  H + +   +  V    +  K
Sbjct: 71  GYALWENMQKVMDEKLKATGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGNE-K 129

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
                 ++P +       F+  ++SY +LP    ++ SV R E +      +R   F   
Sbjct: 130 LAERLCIRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKT--TRPFLRTTEFLWQ 187

Query: 390 DAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIM 448
           + H +  T E+   E L I NL  S  +D+    ++    T  EK  G+ A +       
Sbjct: 188 EGHTIHETAEESQAETLNILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKATY------- 240

Query: 449 KGVLDTIKNSSQD--RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF 506
                TI++   D   + TG     G  +   F+    D  G+ WQ              
Sbjct: 241 -----TIESLMHDGKALQTGTSHNFGTNFSEAFDIKFLDRTGK-WQ-------------- 280

Query: 507 NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTIT- 561
                           +H+  +G   R IG +I     N    +P  ++P+Q ++  I  
Sbjct: 281 ---------------YVHQTSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQVVIVPIAQ 325

Query: 562 ------SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEAS 615
                 + A+E    I  + +     ++ D  N+T  +K  E+ +K IPI +  G K+  
Sbjct: 326 HKEGVLAKALELQGHIQKVAR-----VKIDASNKTPGWKFNEYEMKGIPIRLEVGPKDIE 380

Query: 616 ERSIGIRRFGSTTTQKVS---LLDAIPILTKE 644
           +  + + R  +   + +S   L + IP L +E
Sbjct: 381 KNQVVLVRRDTKEKEFISMDQLEERIPALLEE 412


>gi|327268678|ref|XP_003219123.1| PREDICTED: 39S ribosomal protein L39, mitochondrial-like [Anolis
           carolinensis]
          Length = 336

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 61/261 (23%), Positives = 111/261 (42%), Gaps = 37/261 (14%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT--PEDPRSL-AVIRHS 76
           +T    A  +S    KK+V   ++G++ D++ P+     I+ +T   EDP  +      S
Sbjct: 78  STPYSCAMHLSELHCKKSVLALVDGELWDMNKPLTNSCEIQFLTFKDEDPEEVNKAYWRS 137

Query: 77  CAHIMAEAVQSIWPE------VQVAIGPIIEDGFYYD------FDKEQPFSSDELAQIEK 124
           CA ++   ++  + E      V+    P+I   F YD       D  +P + + L    K
Sbjct: 138 CAMLLGCVLEQAFKEEYSTTLVRAPEVPVIAGAFCYDVILDSKLDDWKP-TEESLRSFTK 196

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN---VTLYRQGEWFD 181
            +  +I +D PF    +  + A E+ +  K  YK +++E   ++ +   V L+R G + D
Sbjct: 197 DIHRLIHQDLPFETLDVDAKVALEILQHNK--YKRDMVEQKASQSSERIVKLHRCGNFVD 254

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           +  GPH+  T     F    +V  A+    S   ++ R  G +     +L   ++     
Sbjct: 255 ISEGPHIPRTS----FCHQYEVTAAHNLQSSQSELIRRFQGLSLPVALKLHHAVW----- 305

Query: 242 EKRDHRKLAREMDLFHIAEDG 262
               HR   R   L  ++EDG
Sbjct: 306 ----HRLRERSRKL--VSEDG 320


>gi|229077749|ref|ZP_04210378.1| Prolyl-tRNA synthetase 2 [Bacillus cereus Rock4-2]
 gi|228705571|gb|EEL57928.1| Prolyl-tRNA synthetase 2 [Bacillus cereus Rock4-2]
          Length = 476

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 85/396 (21%), Positives = 152/396 (38%), Gaps = 61/396 (15%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHLWQ-QSGHWDSYRANMFAV 321
           G +     G+ +++ +   M  K+K   +E +  P  + + L Q +  H + +   +  V
Sbjct: 37  GCMILRPYGYALWENMQKVMDEKLKGTGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWV 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
               D  K      ++P +       F+  ++SY +LP    ++ SV R E +      +
Sbjct: 97  THGGDE-KLAERLCVRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKT--TRPFL 153

Query: 382 RVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           R   F   + H +  T E+   E L I NL  S  +D+    ++    T  EK  G+ A 
Sbjct: 154 RTTEFLWQEGHTIHETAEESQAETLNILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKAT 213

Query: 441 WDDAENIMKGVLDTIKNSSQD--RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
           +            TI++   D   + TG     G  +   F+    D  G+ WQ      
Sbjct: 214 Y------------TIESLMHDGKALQTGTSHNFGTNFSEAFDIKFLDRNGK-WQ------ 254

Query: 499 DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQ 554
                                   +H+  +G   R IG +I     N    +P  ++P+Q
Sbjct: 255 -----------------------YVHQTSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQ 291

Query: 555 AIVTTITSSAVEYAQEIANLLKSH---HLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
            ++  I     E     A  L+ H      ++ D  N+T  +K  E+ +K IPI +  G 
Sbjct: 292 VVIVPIAQHK-EGVLAKATELQGHIQKVARVKIDASNKTPGWKFNEYEMKGIPIRLEVGP 350

Query: 612 KEASERSIGIRRFGSTTTQKVS---LLDAIPILTKE 644
           K+  +  + + R  +   + VS   L + IP L +E
Sbjct: 351 KDIEKNQVVLVRRDTKEKEFVSMDQLEERIPALLEE 386


>gi|15836031|ref|NP_300555.1| prolyl-tRNA synthetase [Chlamydophila pneumoniae J138]
 gi|8978870|dbj|BAA98706.1| prolyl tRNA synthetase [Chlamydophila pneumoniae J138]
          Length = 568

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 37/173 (21%), Positives = 81/173 (46%), Gaps = 9/173 (5%)

Query: 255 LFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDS 313
           LF +++   GV  +    W++   +++ +R ++     +E+  P + +  LWQ +G W++
Sbjct: 32  LFKVSK---GVYTYTPLLWRVVSKMMNIIREELNAIGGQELLLPLLHNAELWQHTGRWEA 88

Query: 314 YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP 373
           + +        D   ++ ++  L P +     +     L S R+LP+ L +  + +R+E 
Sbjct: 89  FTSEGLLYTLKD---REGKSHCLAPTHEEVICSFVAQWLSSKRQLPLHLYQIATKFRDEI 145

Query: 374 SGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
                GL+R R    +D++ F  + EQM  +  K+ +    I+   G   ++V
Sbjct: 146 RPRF-GLIRSRELLMEDSYTFSDSPEQMNEQYEKLRSAYSKIFDRLGLAYVIV 197


>gi|332797142|ref|YP_004458642.1| threonyl-tRNA synthetase editing domain-containing protein
           [Acidianus hospitalis W1]
 gi|332694877|gb|AEE94344.1| threonyl-tRNA synthetase editing domain protein [Acidianus
           hospitalis W1]
          Length = 385

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 1/102 (0%)

Query: 546 LPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPI 605
           LPLW+SPI   +  +    +E  +E AN L S  + +E D +++ +  KIR   +  IP 
Sbjct: 272 LPLWISPIHVRLLPVKKDFLEKTEEFANQLLSKGVRVEIDNKDDGLGNKIRRSGMDWIPY 331

Query: 606 IIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLP 647
           + I G++E    ++ + R      QK   +D +  L K+  P
Sbjct: 332 VAIVGEREIKTSTLTV-RIRKKDEQKSLTVDELYALIKDEDP 372


>gi|315124065|ref|YP_004066069.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|315017787|gb|ADT65880.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
          Length = 508

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/139 (23%), Positives = 66/139 (47%), Gaps = 7/139 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           GSG+  +   G ++   + + ++ ++ K   +E+N   +    LWQ+SG ++ +   +  
Sbjct: 36  GSGLYNFLPLGKRVLDKIKNIVKEEMDKAGAQEVNLSFITPASLWQESGRYNVFGKELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            K   +       F L P +    +++  + + SY++LP+ L + G  +R+E      GL
Sbjct: 96  FKDRKEN-----EFVLGPTHEEAMLSLVKNKITSYKQLPLHLYQIGLKFRDEARPRF-GL 149

Query: 381 MRVRGFTQDDAHVFCTKEQ 399
           +R R F   D + F   E+
Sbjct: 150 LRCREFLMKDGYSFHANEE 168


>gi|296160514|ref|ZP_06843330.1| prolyl-tRNA synthetase [Burkholderia sp. Ch1-1]
 gi|295889263|gb|EFG69065.1| prolyl-tRNA synthetase [Burkholderia sp. Ch1-1]
          Length = 578

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 58/130 (44%), Gaps = 7/130 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P V    LWQ+SG W+ Y   +   K  D    D   F + P +      +  + +
Sbjct: 68  ELLMPAVQPAELWQESGRWEKYGPELLRFK--DRKQSD---FVIGPTHEEVVTDIARNQI 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLI 411
           KSYR+LPV   +  + +R+E      G+MR R F   DA+ F        E   K+++  
Sbjct: 123 KSYRQLPVNFYQVQTKFRDEIRPRF-GVMRGREFIMKDAYSFDKDMDGLRESYRKMYDAY 181

Query: 412 ISIYKDFGFE 421
           + I+   G +
Sbjct: 182 VRIFTRLGLD 191


>gi|254487494|ref|ZP_05100699.1| alanyl-tRNA synthetase [Roseobacter sp. GAI101]
 gi|214044363|gb|EEB85001.1| alanyl-tRNA synthetase [Roseobacter sp. GAI101]
          Length = 885

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 65/139 (46%), Gaps = 20/139 (14%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPI-IEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++ EA+++   +     G +   D   +D+    P S++ELAQ+E+++   I ++
Sbjct: 563 HSATHLLHEALRNALGDHVAQRGSLNAADRLRFDYSHNSPMSAEELAQVEQEVNTYIRQN 622

Query: 134 SPFLKQYLSHEKARELFESK--KEAYKVEILESIPAKENVTLYRQ---GEWFD------- 181
           +P   + ++ + AR L       E Y  E+         V++ RQ   G+  D       
Sbjct: 623 APVETRIMTPDDARGLGAQALFGEKYGDEV-------RVVSMGRQPGSGKGADKSTYSLE 675

Query: 182 LCRGPHVRSTGQVKKFFKL 200
           LC G HVR TG +  F  L
Sbjct: 676 LCGGTHVRQTGDIGAFVLL 694


>gi|225166271|ref|ZP_03727968.1| Proline--tRNA ligase [Opitutaceae bacterium TAV2]
 gi|224799484|gb|EEG18016.1| Proline--tRNA ligase [Opitutaceae bacterium TAV2]
          Length = 302

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 62/143 (43%), Gaps = 10/143 (6%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT--FALKPMNCPGHVAVFNH 350
           E+  P +    LW+Q   W + R  MF    A D  +  R   F L P +      +   
Sbjct: 69  ELWMPHLHPAELWEQGPRWAAAREIMFRADSAGDGKRAPRDPEFVLGPTHEEIITPLVKS 128

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
            + SYR+LP    +  + +RNE     +GLMR R F   DA+ F   +   +  +K +  
Sbjct: 129 EISSYRDLPKNFYQIATKFRNEIR-PRYGLMRAREFVMMDAYSFDVDD---DSAVKAYFA 184

Query: 411 IISIYKDF----GFEKIMVKLST 429
           + + Y+ F    G + I V+  T
Sbjct: 185 MKTAYEKFFARLGVQAIAVEADT 207


>gi|148887021|sp|Q0VRL1|SYP_ALCBS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
          Length = 572

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 39/170 (22%), Positives = 73/170 (42%), Gaps = 8/170 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + +   +R ++ +   +E+  P V    LW++SG   +Y   +  
Sbjct: 36  ASGLYTWLPSGLRVLRKVEQVIREEMDRAGAQEVLMPVVQPMELWEESGRAPAYGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +     T +    F L P +      +  + L SY++LP    +  + +R+E      G+
Sbjct: 96  I-----TDRHNNPFCLGPTHEEVITDMVRNELHSYKQLPANFYQIQTKFRDEIRPRF-GI 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKI-HNLIISIYKDFGFEKIMVKLST 429
           MR R F   DA+ F T      +  +I H    +I+   G +   V+  T
Sbjct: 150 MRSREFIMKDAYSFHTNMDSLADTYQIMHRAYCAIFDRLGLDYRPVEADT 199


>gi|195494429|ref|XP_002094836.1| GE19994 [Drosophila yakuba]
 gi|194180937|gb|EDW94548.1| GE19994 [Drosophila yakuba]
          Length = 333

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 72/269 (26%), Positives = 123/269 (45%), Gaps = 45/269 (16%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVC-DLSDPVREG-S 58
           +P D+ L   + +I      +T  + A+ +S    K++    I+G V  D+  P++E  +
Sbjct: 65  LPEDVTLVM-NSNI------STPFNCAQHLSEGHCKRSALALIDGSVPWDMHRPLQESCT 117

Query: 59  IEIITPEDPRSLAVIR---HSCAHIMAEAVQSIW-PEVQVAI----GPIIEDG-FYYDFD 109
           ++++         V +    +C+ ++  A+   + PE  + +    GP I+ G F +D  
Sbjct: 118 LQLLNFHVSEPHVVNKAFWRTCSFMLGAALNRAFKPEANLQLHSFPGPNIKSGSFVHDIV 177

Query: 110 KE----QPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESI 165
            +    +P   D  A I  +M ++ A+D    +  +  + A+E+F+  K  YK E L SI
Sbjct: 178 LQTQNWEPKKEDRRA-ISAEMVKLAAQDLRIERLDVQQDLAQEMFKDSK--YKSEQLPSI 234

Query: 166 PAKEN--VTLYRQGEWFDLCRGPHVRSTGQVKK--FFKLMKV-----AGAYWRGDSNRPM 216
             + N  VTLYR G+  D+ RGP V ST  + K       KV     AGA++        
Sbjct: 235 AQQTNGRVTLYRLGDHIDISRGPMVASTSFLGKCVISAAHKVAEEGPAGAFY-------- 286

Query: 217 LSRIYGTAWNTQQELTQYLY-FLEESEKR 244
             RI G A  T  +L    +  LEE  K+
Sbjct: 287 --RIQGVALPTGFQLNHVAFGVLEERSKK 313


>gi|295100007|emb|CBK89096.1| prolyl-tRNA synthetase, family II [Eubacterium cylindroides T2-87]
          Length = 564

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 41/176 (23%), Positives = 83/176 (47%), Gaps = 12/176 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  +G+      G K+   + + +R ++   D +E+  P ++ + ++ +SG  + + +
Sbjct: 32  IKKSSNGMYMIMPMGKKVLAKIENIVREEMDAKDAQELLMPALIPEEVYIKSGRREVFGS 91

Query: 317 NMFAVKCADDTIKD--LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
           NMF       T+ D  ++ + L P +        +   KSY++ P  L +  + +R+E +
Sbjct: 92  NMF-------TMNDRYMKRYVLGPTHEELFAVAASMDGKSYKDFPYNLYQIQTKFRDE-T 143

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFEKIMVKLST 429
              +GL+RVR F   DA+ F   E   +E   K+++    I+     E  +VK  T
Sbjct: 144 RPRYGLIRVREFIMKDAYTFDIDEAGLDEAYAKMYDAYCRIFDRMELEYKIVKADT 199


>gi|228913143|ref|ZP_04076782.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|228846548|gb|EEM91561.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
          Length = 502

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 92/448 (20%), Positives = 171/448 (38%), Gaps = 62/448 (13%)

Query: 212 SNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRK 271
             R  L  + G      +E  Q +  +EE   + +  + ++ +L   +    G +     
Sbjct: 12  GTRAFLYFLEGGRLTMAKEQVQAITKMEEDFAQWYTDIVKKAELVDYS-SVKGCMILRPY 70

Query: 272 GWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIK 329
           G+ +++ +   M  K+K   +E +  P  + + L Q +  H + +   +  V    D  K
Sbjct: 71  GYALWENMQKVMDEKLKATGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGDE-K 129

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
                 ++P +       F+  ++SY +LP    ++ SV R E +      +R   F   
Sbjct: 130 LAERLCVRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKT--TRPFLRTTEFLWQ 187

Query: 390 DAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIM 448
           + H +  T E+   E L I NL  S  +D+    ++    T  EK  G+ A +       
Sbjct: 188 EGHTIHETAEESQAETLNILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKATY------- 240

Query: 449 KGVLDTIKNSSQD--RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF 506
                TI++   D   + TG     G  +   F+    D  G+ WQ              
Sbjct: 241 -----TIESLMHDGKALQTGTSHNFGTNFSEAFDIKFLDRNGK-WQ-------------- 280

Query: 507 NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTITS 562
                           +H+  +G   R IG +I     N    +P  ++P+Q ++  I  
Sbjct: 281 ---------------YVHQTSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQVVIVPIAQ 325

Query: 563 SAVEYAQEIANLLKSH---HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSI 619
              E     A  L+ H      ++ D  N+T  +K  E+ +K IPI +  G K+  +  +
Sbjct: 326 HK-EGVLAKATELQGHIQKVARVKIDASNKTPGWKFNEYEMKGIPIRLEVGPKDIEKNQV 384

Query: 620 GIRRFGSTTTQKVS---LLDAIPILTKE 644
            + R  +   + +S   L + IP L +E
Sbjct: 385 VLVRRDTKEKEFISMDQLEERIPALLEE 412


>gi|15618411|ref|NP_224696.1| prolyl-tRNA synthetase [Chlamydophila pneumoniae CWL029]
 gi|16752543|ref|NP_444805.1| prolyl-tRNA synthetase [Chlamydophila pneumoniae AR39]
 gi|33241851|ref|NP_876792.1| prolyl-tRNA synthetase [Chlamydophila pneumoniae TW-183]
 gi|13633970|sp|Q9Z851|SYP_CHLPN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|4376787|gb|AAD18640.1| Prolyl tRNA Synthetase [Chlamydophila pneumoniae CWL029]
 gi|7189180|gb|AAF38117.1| prolyl-tRNA synthetase [Chlamydophila pneumoniae AR39]
 gi|33236360|gb|AAP98449.1| prolyl-tRNA synthetase [Chlamydophila pneumoniae TW-183]
          Length = 568

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 37/173 (21%), Positives = 81/173 (46%), Gaps = 9/173 (5%)

Query: 255 LFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDS 313
           LF +++   GV  +    W++   +++ +R ++     +E+  P + +  LWQ +G W++
Sbjct: 32  LFKVSK---GVYTYTPLLWRVVSKMMNIIREELNAIGGQELLLPLLHNAELWQHTGRWEA 88

Query: 314 YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP 373
           + +        D   ++ ++  L P +     +     L S R+LP+ L +  + +R+E 
Sbjct: 89  FTSEGLLYTLKD---REGKSHCLAPTHEEVICSFVAQWLSSKRQLPLHLYQIATKFRDEI 145

Query: 374 SGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
                GL+R R    +D++ F  + EQM  +  K+ +    I+   G   ++V
Sbjct: 146 RPRF-GLIRSRELLMEDSYTFSDSPEQMNEQYEKLRSAYSKIFDRLGLAYVIV 197


>gi|121612666|ref|YP_001000209.1| alanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176]
 gi|167005165|ref|ZP_02270923.1| alanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176]
 gi|205830017|sp|A1VYL8|SYA_CAMJJ RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|87250291|gb|EAQ73249.1| alanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176]
          Length = 842

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 61/130 (46%), Gaps = 19/130 (14%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++  A++ I        G ++E +   +DF   +  + +EL  IEK++ E+I   
Sbjct: 549 HSATHLLHHALREILGSHVSQAGSLVESNKLRFDFTHHKALNKEELESIEKRVNEMIINS 608

Query: 134 SPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           S  + + +  E+A++     LF  K +              NV +   GE  +LC G HV
Sbjct: 609 SEAILENMPLEEAKKSGAIALFNEKYQG-------------NVRVLTLGESKELCGGTHV 655

Query: 189 RSTGQVKKFF 198
           ++T Q+  F+
Sbjct: 656 KNTAQIGSFY 665


>gi|117919846|ref|YP_869038.1| prolyl-tRNA synthetase [Shewanella sp. ANA-3]
 gi|152016600|sp|A0KV13|SYP_SHESA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|117612178|gb|ABK47632.1| prolyl-tRNA synthetase [Shewanella sp. ANA-3]
          Length = 570

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 37/148 (25%), Positives = 65/148 (43%), Gaps = 7/148 (4%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I  + SG+  +   G ++ + + + +R ++ K    EI  P V    LW ++G WD +  
Sbjct: 32  IRRNASGLYSYLPTGLRVLRKVEAIVREEMNKAGAIEILMPMVQPADLWVETGRWDKFGP 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            +   K   +     R F L P +      +    + SY++LP+ L +  + +R+E    
Sbjct: 92  ELLRFKDRHN-----RDFVLGPTHEEVITDLIRKEVSSYKQLPLNLYQIQTKFRDEVRPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             G+MR R F   DA+ F       NE 
Sbjct: 147 F-GVMRSREFLMKDAYSFHLDVDTMNET 173


>gi|269959066|ref|YP_003328855.1| alanyl-tRNA synthetase [Anaplasma centrale str. Israel]
 gi|269848897|gb|ACZ49541.1| alanyl-tRNA synthetase [Anaplasma centrale str. Israel]
          Length = 882

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 37/156 (23%), Positives = 71/156 (45%), Gaps = 13/156 (8%)

Query: 43  INGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQS-IWPEVQVAIGPIIE 101
           I   V ++ D V + +I++    D R      HS  HI+   +++ I   +Q     + E
Sbjct: 549 ITSGVFNVGDTV-DAAIDV----DRRERLKANHSATHILHSVLRTHIDGNIQQKGSLVAE 603

Query: 102 DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEI 161
           D   +DF+     + +++A IE+++   I  + P L  + S       FE+  +   + +
Sbjct: 604 DKLRFDFNYASALTKEQIALIEREVNRRIMSNKPVLTDHCS-------FEAAVQGGAIAL 656

Query: 162 LESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
                ++ +V +   G+  +LC G HVR TG +  F
Sbjct: 657 FGEKYSEHSVRVVSMGDSKELCGGTHVRYTGDIGAF 692


>gi|218235284|ref|YP_002365239.1| prolyl-tRNA synthetase [Bacillus cereus B4264]
 gi|229148794|ref|ZP_04277043.1| Prolyl-tRNA synthetase 2 [Bacillus cereus m1550]
 gi|218163241|gb|ACK63233.1| proline--tRNA ligase [Bacillus cereus B4264]
 gi|228634682|gb|EEK91262.1| Prolyl-tRNA synthetase 2 [Bacillus cereus m1550]
          Length = 476

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 84/396 (21%), Positives = 153/396 (38%), Gaps = 61/396 (15%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHLWQ-QSGHWDSYRANMFAV 321
           G +     G+ +++ +   M  K+K+  +E +  P  + + L Q +  H + +   +  V
Sbjct: 37  GCMILRPYGYALWENMQKVMDEKLKETGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWV 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
               D  K      ++P +       F+  ++SY +LP    ++ SV R E +      +
Sbjct: 97  THGGDE-KLAERLCVRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKT--TRPFL 153

Query: 382 RVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           R   F   + H +  T E+   E L I NL  S  +D+    ++    T  EK  G+ A 
Sbjct: 154 RTTEFLWQEGHTIHETAEESQAETLNILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKAT 213

Query: 441 WDDAENIMKGVLDTIKNSSQD--RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
           +            TI++   D   + TG     G  +   F+    D  G+ WQ      
Sbjct: 214 Y------------TIESLMHDGKALQTGTSHNFGTNFSKAFDIKFLDRNGK-WQ------ 254

Query: 499 DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQ 554
                                   +H+  +G   R IG +I     N    +P  ++P+Q
Sbjct: 255 -----------------------YVHQTSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQ 291

Query: 555 AIVTTITSSAVEYAQEIANLLKSH---HLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
            ++  I     E     A  L++H      ++ D  N+T  +K  E+ +K IPI +  G 
Sbjct: 292 VVIVPIAQHK-EGVLAKATELQAHIQKVARVKIDASNKTPGWKFNEYEMKGIPIRLEVGP 350

Query: 612 KEASERSIGIRRFGSTTTQKV---SLLDAIPILTKE 644
           K+  +  + + R  +   + V    L + IP L +E
Sbjct: 351 KDIEKNQVVLVRRDTKEKEFVPMDQLEERIPALLEE 386


>gi|110833600|ref|YP_692459.1| prolyl-tRNA synthetase [Alcanivorax borkumensis SK2]
 gi|110646711|emb|CAL16187.1| Prolyl-tRNA synthetase [Alcanivorax borkumensis SK2]
          Length = 566

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 39/170 (22%), Positives = 73/170 (42%), Gaps = 8/170 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + +   +R ++ +   +E+  P V    LW++SG   +Y   +  
Sbjct: 30  ASGLYTWLPSGLRVLRKVEQVIREEMDRAGAQEVLMPVVQPMELWEESGRAPAYGPELLR 89

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +     T +    F L P +      +  + L SY++LP    +  + +R+E      G+
Sbjct: 90  I-----TDRHNNPFCLGPTHEEVITDMVRNELHSYKQLPANFYQIQTKFRDEIRPRF-GI 143

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKI-HNLIISIYKDFGFEKIMVKLST 429
           MR R F   DA+ F T      +  +I H    +I+   G +   V+  T
Sbjct: 144 MRSREFIMKDAYSFHTNMDSLADTYQIMHRAYCAIFDRLGLDYRPVEADT 193


>gi|90077278|dbj|BAE88319.1| unnamed protein product [Macaca fascicularis]
          Length = 185

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 2/86 (2%)

Query: 5   IKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEII 62
           IK+T PDG  +       T   +A  IS+ LA   V   +N  V DL  P+ E  ++E++
Sbjct: 83  IKVTLPDGKQVDAESWKTTPYQIACGISQGLADNTVIAKVNNVVWDLDRPLEEDCTLELL 142

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSI 88
             ED  + AV  HS  HIM EA++ +
Sbjct: 143 KFEDEEAQAVYWHSSPHIMGEAMERV 168


>gi|114046916|ref|YP_737466.1| prolyl-tRNA synthetase [Shewanella sp. MR-7]
 gi|122944801|sp|Q0HWU6|SYP_SHESR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|113888358|gb|ABI42409.1| prolyl-tRNA synthetase [Shewanella sp. MR-7]
          Length = 570

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 37/148 (25%), Positives = 65/148 (43%), Gaps = 7/148 (4%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I  + SG+  +   G ++ + + + +R ++ K    EI  P V    LW ++G WD +  
Sbjct: 32  IRRNASGLYSYLPTGLRVLRKVEAIVREEMNKAGAIEILMPMVQPADLWVETGRWDKFGP 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            +   K   +     R F L P +      +    + SY++LP+ L +  + +R+E    
Sbjct: 92  ELLRFKDRHN-----RDFVLGPTHEEVITDLIRKEVSSYKQLPLNLYQIQTKFRDEVRPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             G+MR R F   DA+ F       NE 
Sbjct: 147 F-GVMRSREFLMKDAYSFHLDVDTMNET 173


>gi|330839271|ref|YP_004413851.1| Prolyl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
 gi|329747035|gb|AEC00392.1| Prolyl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
          Length = 568

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 69/157 (43%), Gaps = 12/157 (7%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E   HR + R      I +   GV  +    W+  + +   +R ++     +E+  P 
Sbjct: 17  DAEITSHRLMLRA---GMIRKAAGGVYTYLPLAWRTIKKIEQIIREEMDAAGGQELCMPI 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVK-CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           +    +WQ+SG W  +   MF +K C        R F L P +      +    ++SY++
Sbjct: 74  MQPAEIWQESGRWSVFGQEMFRLKDCHG------REFCLGPTHEEMITTLVRDEVRSYKQ 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           LP+ L +  + YR+E      GLMR R F   D + F
Sbjct: 128 LPLLLYQIQNKYRDEIRPRF-GLMRSREFIMKDLYSF 163


>gi|194871047|ref|XP_001972775.1| GG13700 [Drosophila erecta]
 gi|190654558|gb|EDV51801.1| GG13700 [Drosophila erecta]
          Length = 333

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 62/233 (26%), Positives = 113/233 (48%), Gaps = 34/233 (14%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVC-DLSDPVREG-S 58
           +P D+ L   + +I      +T  + A+ +S    K++    I+G V  D+  P++E  +
Sbjct: 65  LPEDVTLVM-NSNI------STPFNCAQHLSEGHCKRSALALIDGSVPWDMHRPLQESCT 117

Query: 59  IEIITPEDPRSLAVIR---HSCAHIMAEAVQSIW-PEVQVAI----GPIIEDG-FYYDFD 109
           ++++         V +    +C+ ++  A+   + PE  + +    GP I+ G F +D  
Sbjct: 118 LQLLNFHVSEPHVVNKAFWRTCSFMLGAALNRAFKPEANLQLHSFPGPNIKSGSFVHDIV 177

Query: 110 KE----QPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESI 165
            +    +P + +E+  I  +M ++ A+D    +  +  + A+E+F+  K  YK E L SI
Sbjct: 178 LQTQNWEP-AKEEMRAISAEMVKLAAQDLRIERLDVQQDLAQEMFKDSK--YKSEQLPSI 234

Query: 166 PAKEN--VTLYRQGEWFDLCRGPHVRSTGQVKK--FFKLMKVA-----GAYWR 209
             + N  VTLYR G+  D+ RGP V ST  + K       KVA     GA++R
Sbjct: 235 AQQTNGRVTLYRLGDHIDISRGPMVASTSFLGKCAISAAHKVAEEGPSGAFYR 287


>gi|220919170|ref|YP_002494474.1| prolyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
 gi|254782880|sp|B8J9M0|SYP_ANAD2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|219957024|gb|ACL67408.1| prolyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 574

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 51/103 (49%), Gaps = 6/103 (5%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           +E   P +    +W++SG WD    NMF +K  D    D   + L   +     AV    
Sbjct: 70  QEFYLPALHPAEIWKESGRWDVMGDNMFRLK--DRKGGD---YCLGMTHEEIFTAVARDE 124

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           L+SYR+LP    +  + +R+EP     GL+RVR FT  DA+ F
Sbjct: 125 LRSYRQLPQVWYQIQTKFRDEPRPK-SGLLRVRQFTMKDAYSF 166


>gi|113969687|ref|YP_733480.1| prolyl-tRNA synthetase [Shewanella sp. MR-4]
 gi|123130574|sp|Q0HKJ4|SYP_SHESM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|113884371|gb|ABI38423.1| prolyl-tRNA synthetase [Shewanella sp. MR-4]
          Length = 570

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 37/148 (25%), Positives = 65/148 (43%), Gaps = 7/148 (4%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I  + SG+  +   G ++ + + + +R ++ K    EI  P V    LW ++G WD +  
Sbjct: 32  IRRNASGLYSYLPTGLRVLRKVEAIVREEMNKAGAIEILMPMVQPADLWVETGRWDKFGP 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            +   K   +     R F L P +      +    + SY++LP+ L +  + +R+E    
Sbjct: 92  ELLRFKDRHN-----RDFVLGPTHEEVITDLIRKEVSSYKQLPLNLYQIQTKFRDEVRPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             G+MR R F   DA+ F       NE 
Sbjct: 147 F-GVMRSREFLMKDAYSFHLDVDTMNET 173


>gi|228963504|ref|ZP_04124661.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228796198|gb|EEM43649.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis serovar sotto str.
           T04001]
          Length = 476

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 83/396 (20%), Positives = 153/396 (38%), Gaps = 61/396 (15%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHLWQ-QSGHWDSYRANMFAV 321
           G +     G+ +++ +   M  K+K+  +E +  P  + + L Q +  H + +   +  +
Sbjct: 37  GCMILRPYGYALWENMQKVMDEKLKETGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWI 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
               D  K      ++P +       F+  ++SY +LP    ++ SV R E +      +
Sbjct: 97  THGGDE-KLAERLCVRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKT--TRPFL 153

Query: 382 RVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           R   F   + H +  T E+   E L I NL  S  +D+    ++    T  EK  G+ A 
Sbjct: 154 RTTEFLWQEGHTIHETAEESQAETLNILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKAT 213

Query: 441 WDDAENIMKGVLDTIKNSSQD--RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
           +            TI++   D   + TG     G  +   F+    D  G+ WQ      
Sbjct: 214 Y------------TIESLMHDGKALQTGTSHNFGTNFSEAFDIKFLDRNGK-WQ------ 254

Query: 499 DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQ 554
                                   +H+  +G   R IG +I     N    +P  ++P+Q
Sbjct: 255 -----------------------YVHQTSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQ 291

Query: 555 AIVTTITSSAVEYAQEIANLLKSH---HLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
            ++  I     E     A  L+ H      ++ D  N+T  +K  E+ +K IPI +  G 
Sbjct: 292 VVIVPIAQHK-EGVLAKATELQGHIQKVARVKIDASNKTPGWKFNEYEMKGIPIRLEVGP 350

Query: 612 KEASERSIGIRRFGSTTTQKVS---LLDAIPILTKE 644
           K+  +  + + R  +   + +S   L + IP L +E
Sbjct: 351 KDIEKNQVVLVRRDTKEKEFISMDQLEERIPALLEE 386


>gi|163750377|ref|ZP_02157617.1| prolyl-tRNA synthetase [Shewanella benthica KT99]
 gi|161329867|gb|EDQ00853.1| prolyl-tRNA synthetase [Shewanella benthica KT99]
          Length = 569

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 45/204 (22%), Positives = 92/204 (45%), Gaps = 15/204 (7%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI- 287
           +++YL   ++    D   ++ ++ L    +  + SG+  W   G ++ + + + +R ++ 
Sbjct: 3   VSKYLLSTQKETPADAEVVSHQLMLRAGMVRRNASGLYSWLPTGLRVLRKVEAIVREEMN 62

Query: 288 KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
           K    EI  P V    LW ++G W+ +   +   K   +     R F L P +      +
Sbjct: 63  KAGAIEILMPMVQPADLWIETGRWEKFGPELLRFKDRHN-----RDFVLGPTHEEVITDI 117

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
               + SY++LP+ L +  + +R+E      G+MR R F   DA+ F   ++  +     
Sbjct: 118 IRKEINSYKQLPLTLYQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHLDQESMDVT--- 173

Query: 408 HNLIISIYKDFGFEKIMVKLSTRP 431
           ++ +   Y +  FE++   LS RP
Sbjct: 174 YDTMFQAYNNI-FERM--GLSFRP 194


>gi|319653797|ref|ZP_08007892.1| prolyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
 gi|317394523|gb|EFV75266.1| prolyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
          Length = 479

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 73/365 (20%), Positives = 148/365 (40%), Gaps = 61/365 (16%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHLWQ-QSGHWDSYRANM-FA 320
           G I +   G++I++ +   M R+ K+  +     P ++ +  +Q +  H + +   + + 
Sbjct: 30  GCIAFKPDGYEIWEHIQEEMDRRFKETGHRNAYFPMLIPESFFQKEKDHIEGFSPELPWI 89

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            + A + +++    AL+P +      +++  +KSYR+LPV + ++ +V+R E        
Sbjct: 90  TEAAGEKLEE--RLALRPTSETMIGHLYSDWIKSYRDLPVLINQWANVFRWE--KKTLPF 145

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF--GFEKIMVKLSTR-PEKRVGS 437
           +R   F   + H     E+   +  K    ++SIYK+   G   I V    + P +R   
Sbjct: 146 IRTSEFLWQEGHTAHVDEE---DARKETMQMLSIYKEVVEGLLAIPVYDGQKTPSERFA- 201

Query: 438 DALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ 497
                       G +DT    +  +    V  G   + G KF                  
Sbjct: 202 ------------GAVDTFSIEAMMKDGKAVQAGTSHYLGTKF------------------ 231

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG--IMIENFKGN--LPLWLSPI 553
                   F+  Y+N  ++      +H   +G+  R IG  IM+   +    LP  ++P 
Sbjct: 232 -----AEAFDIKYLNKENKH---TFVHTTSWGTSTRLIGSVIMVHGDEQGLVLPPKIAPT 283

Query: 554 QAIVTTI-----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIII 608
           Q ++  +       + +E   EI   LK+  + +  D  +++  YK  E  +K +P+ I 
Sbjct: 284 QVVLIPVGPWKKNPAIMEKLDEIFAALKAEGIRVRLDDSDQSPGYKFNEWELKGVPVRIE 343

Query: 609 CGDKE 613
            G ++
Sbjct: 344 LGPRD 348


>gi|110801216|ref|YP_695997.1| putative threonyl-tRNA synthetase/uridine kinase [Clostridium
           perfringens ATCC 13124]
 gi|168212082|ref|ZP_02637707.1| putative threonyl-tRNA synthetase/uridine kinase [Clostridium
           perfringens B str. ATCC 3626]
 gi|110675863|gb|ABG84850.1| phosphoribulokinase/uridine kinase family protein [Clostridium
           perfringens ATCC 13124]
 gi|170710004|gb|EDT22186.1| putative threonyl-tRNA synthetase/uridine kinase [Clostridium
           perfringens B str. ATCC 3626]
          Length = 551

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 94/200 (47%), Gaps = 14/200 (7%)

Query: 14  IKNFPVHATGSDV----AESISRSLAKKAVAVAI-------NGKVCDLSDPVR-EGSIEI 61
           +K+F V+  G  +     E  S  L K  +   I         K  + +D +  +G IE+
Sbjct: 1   MKSFRVNVNGESLLFNEGEKYSAILKKDYINEKIPITLVKQRNKYYEFTDLINNDGDIEL 60

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           I   DP        +   +  +A   ++ + ++ I   I  G + +  KE+    +++ +
Sbjct: 61  INISDPHGKIAYSRTLQFVFIKATLDLFKDARINIEHSISKGTFGEIHKEKALDEEDILK 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           I+KKMQEII ++    K  +  ++A  +F+S K   KV++L  +  +E V LY+  + +D
Sbjct: 121 IKKKMQEIINKNIIIEKIKMPKKEAIYIFKSYKMQDKVDLLHWV-QEEYVNLYKLEDRYD 179

Query: 182 LCRGPHVRSTGQVKKFFKLM 201
              G    STG V K+F L+
Sbjct: 180 YFYGDMAYSTG-VLKYFDLL 198


>gi|78037678|emb|CAJ25423.1| prolyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria str.
           85-10]
          Length = 621

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 43/202 (21%), Positives = 84/202 (41%), Gaps = 14/202 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E   HR + R   +  +A   SG+  W   G ++ + + + +R ++ +    E+  P 
Sbjct: 74  DAELVSHRLMLRAGMIRKLA---SGLYTWSPLGLRVLRKVEAIVREEMNRAGAVEVLFPT 130

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +  + LW  +G W+ +   +  +K   +     + F   P             + SY++L
Sbjct: 131 IQPRELWDATGRWEKFGGQLLKIKDRKE-----QEFCYSPTAEEAAAEFARQEINSYKQL 185

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKD 417
           P+   +  + +R+E      G+MR R F   DA+ F  T E M  E   +      I+  
Sbjct: 186 PLNFYQIQTKFRDEIRPRF-GVMRAREFLMKDAYSFHLTDEDMAREYDNMRAAYTRIFTR 244

Query: 418 FGFEKIMVKLSTRPEKRVGSDA 439
            G +   V+  +     +G DA
Sbjct: 245 LGLDFRAVQADS---GAIGGDA 263


>gi|253576294|ref|ZP_04853624.1| prolyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14]
 gi|251844187|gb|EES72205.1| prolyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14]
          Length = 571

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 74/158 (46%), Gaps = 10/158 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E   H+ L R     +I +  +G+  +   G K+   +   +R ++ +   +E+  P 
Sbjct: 17  DAEAASHQHLLRA---GYIRQLAAGIYSYLPLGRKVLLRIEQIVREEMNRAGAQELLLPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG ++ Y   +   K   D     R FAL P +     ++    + SYR+L
Sbjct: 74  MQPAELWQRSGRYERYGPELIRFKDRHD-----REFALGPTHEEVITSLLRDEVNSYRQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT 396
           P+ + +  + +R+E      GL+R R F   DA+ F T
Sbjct: 129 PLTVYQIQTKFRDERRPRF-GLLRGREFLMKDAYSFDT 165


>gi|15835287|ref|NP_297046.1| prolyl-tRNA synthetase [Chlamydia muridarum Nigg]
 gi|270285461|ref|ZP_06194855.1| prolyl-tRNA synthetase [Chlamydia muridarum Nigg]
 gi|270289472|ref|ZP_06195774.1| prolyl-tRNA synthetase [Chlamydia muridarum Weiss]
 gi|301336858|ref|ZP_07225060.1| prolyl-tRNA synthetase [Chlamydia muridarum MopnTet14]
 gi|13633968|sp|Q9PK01|SYP_CHLMU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|7190706|gb|AAF39493.1| prolyl-tRNA synthetase [Chlamydia muridarum Nigg]
          Length = 579

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 78/173 (45%), Gaps = 14/173 (8%)

Query: 263 SGVIFWHRKG----WKIFQTLISYMRRKIKDDY-----EEINTPQVLDQHLWQQSGHWDS 313
           +G +F   KG      +FQ +I  M   I+++      +E+  P +    LWQ++G W++
Sbjct: 29  AGYLFKTSKGIYSYTPLFQRVILKMTEIIREELNAIGGQEVCLPLLQSAELWQKTGRWEA 88

Query: 314 YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP 373
           + +        D   K++    L P +        +  L   ++LPV L + G+ +R+E 
Sbjct: 89  FLSEKLLYVLKDRENKEM---CLAPTHEEVVSEFVSQWLTGRKQLPVHLYQIGTKFRDEI 145

Query: 374 SGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
                GLMR + F  +D++ F  + EQM  +  K+      I+     + ++V
Sbjct: 146 RPRF-GLMRAKEFLMEDSYTFSDSPEQMEEQYAKLRLAYQRIFDRLNLKYVIV 197


>gi|256075323|ref|XP_002573969.1| prolyl-tRNA synthetase [Schistosoma mansoni]
 gi|238659161|emb|CAZ30202.1| prolyl-tRNA synthetase, putative [Schistosoma mansoni]
          Length = 472

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 55/106 (51%), Gaps = 12/106 (11%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN---CPGHVAVF 348
           + +  P +  +H+W++SG W + ++++F VK   D +     + L+P +       VA  
Sbjct: 72  QRVLLPTLGPRHIWEKSGRWSTMQSSLFRVK---DRLS--HEYCLQPTHEEYITNFVACL 126

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           N    SY+ LPV + +  S +R+EP    HGL+R R F   D + F
Sbjct: 127 N---LSYKSLPVLVYQITSKFRDEPHPK-HGLVRGREFLMQDIYTF 168


>gi|148555262|ref|YP_001262844.1| prolyl-tRNA synthetase [Sphingomonas wittichii RW1]
 gi|166980160|sp|A5V8U0|SYP_SPHWW RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|148500452|gb|ABQ68706.1| prolyl-tRNA synthetase [Sphingomonas wittichii RW1]
          Length = 437

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 44/183 (24%), Positives = 77/183 (42%), Gaps = 11/183 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  +G+  W   G ++ + +   +R  + +    E+  P +    LW++SG +D+Y  
Sbjct: 32  IRQTAAGIYAWLPLGHRVLRKIEQIVREEQDRAGAIELLMPTMQSADLWRESGRYDAYGP 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  +K   D     R     P N     A+F    +SYR+LP  L      +R+E    
Sbjct: 92  EMLRIKDRHD-----REMLFGPTNEEMITAIFRDNARSYRDLPRILYHIQWKFRDEVRPR 146

Query: 377 LHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
             G+MR R F   DA+ F    E   +   ++    +  ++  G   I ++  T P   +
Sbjct: 147 F-GVMRGREFLMKDAYSFDLDIEGARHSYNRMFVAYLRTFRRMGLSAIPMQADTGP---I 202

Query: 436 GSD 438
           G D
Sbjct: 203 GGD 205


>gi|312795091|ref|YP_004028013.1| Prolyl-tRNA synthetase [Burkholderia rhizoxinica HKI 454]
 gi|312166866|emb|CBW73869.1| Prolyl-tRNA synthetase (EC 6.1.1.15) [Burkholderia rhizoxinica HKI
           454]
          Length = 589

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 56/130 (43%), Gaps = 7/130 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P V    LWQ+S  W+ Y   +  VK   D     R F + P +      +    +
Sbjct: 79  ELLMPAVQPAELWQESSRWEQYGPELLRVKDRHD-----RDFVVGPTHEEVVTDIARKEI 133

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLI 411
           KSYR++PV   +  + +R+E      G+MR R F   DA+ F            K+++  
Sbjct: 134 KSYRQMPVNFYQVQTKFRDEIRPRF-GVMRGREFIMKDAYSFDRDRAGLQLSYQKMYDAY 192

Query: 412 ISIYKDFGFE 421
           + I+   G E
Sbjct: 193 VRIFTRLGLE 202


>gi|197124440|ref|YP_002136391.1| prolyl-tRNA synthetase [Anaeromyxobacter sp. K]
 gi|226731425|sp|B4UGI0|SYP_ANASK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|196174289|gb|ACG75262.1| prolyl-tRNA synthetase [Anaeromyxobacter sp. K]
          Length = 574

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 51/103 (49%), Gaps = 6/103 (5%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           +E   P +    +W++SG WD    NMF +K  D    D   + L   +     AV    
Sbjct: 70  QEFYLPALHPAEIWKESGRWDVMGDNMFRLK--DRKGGD---YCLGMTHEEIFTAVARDE 124

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           L+SYR+LP    +  + +R+EP     GL+RVR FT  DA+ F
Sbjct: 125 LRSYRQLPQVWYQIQTKFRDEPRPK-SGLLRVRQFTMKDAYSF 166


>gi|21109942|gb|AAM38410.1| prolyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str. 306]
          Length = 583

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 43/202 (21%), Positives = 84/202 (41%), Gaps = 14/202 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E   HR + R   +  +A   SG+  W   G ++ + + + +R ++ +    E+  P 
Sbjct: 36  DAELVSHRLMLRAGMIRKLA---SGLYTWSPLGLRVLRKVEAIVREEMNRAGAVEVLFPT 92

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +  + LW  +G W+ +   +  +K   +     + F   P             + SY++L
Sbjct: 93  IQPRELWDATGRWEKFGGQLLKIKDRKE-----QEFCYSPTAEEAAAEFARQEINSYKQL 147

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKD 417
           P+   +  + +R+E      G+MR R F   DA+ F  T E M  E   +      I+  
Sbjct: 148 PLNFYQIQTKFRDEIRPRF-GVMRAREFLMKDAYSFHLTDEDMAREYDNMRAAYTRIFTR 206

Query: 418 FGFEKIMVKLSTRPEKRVGSDA 439
            G +   V+  +     +G DA
Sbjct: 207 LGLDFRAVQADS---GAIGGDA 225


>gi|315930573|gb|EFV09608.1| Proline-tRNA ligase [Campylobacter jejuni subsp. jejuni 305]
          Length = 220

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/143 (22%), Positives = 68/143 (47%), Gaps = 7/143 (4%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           + + GSG+  +   G ++   + + ++ ++ K   +E+N   +    LWQ+SG ++ +  
Sbjct: 32  VEQIGSGLYNFLPLGKRVLDKIKNIVKEEMDKAGAQEVNLSFITPASLWQESGRYNVFGK 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            +   K   +       F L P +    +++  + + SY++LP+ L + G  +R+E    
Sbjct: 92  ELLRFKDRKEN-----EFVLGPTHEEAMLSLVKNKITSYKQLPLHLYQIGLKFRDEARPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQ 399
             GL+R R F   D + F   E+
Sbjct: 147 F-GLLRCREFLMKDGYSFHANEE 168


>gi|310641908|ref|YP_003946666.1| prolyl-tRNA synthetase 1 [Paenibacillus polymyxa SC2]
 gi|309246858|gb|ADO56425.1| Prolyl-tRNA synthetase 1 [Paenibacillus polymyxa SC2]
          Length = 581

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +    LWQ+SG +D Y   +  ++   D     R FAL P +     ++  + +
Sbjct: 68  ELLMPVLQPTELWQESGRYDVYGPELMRLQDRHD-----REFALGPTHEEVITSLIRNEV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
            SYR+LPV L +  + +R+E      GL+R R F   DA+ F
Sbjct: 123 NSYRKLPVTLYQIQTKFRDERRPRF-GLLRSREFLMKDAYSF 163


>gi|289662612|ref|ZP_06484193.1| prolyl-tRNA synthetase [Xanthomonas campestris pv. vasculorum
           NCPPB702]
 gi|289668443|ref|ZP_06489518.1| prolyl-tRNA synthetase [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 564

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 43/202 (21%), Positives = 84/202 (41%), Gaps = 14/202 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E   HR + R   +  +A   SG+  W   G ++ + + + +R ++ +    E+  P 
Sbjct: 17  DAELVSHRLMLRAGMIRKLA---SGLYTWSPLGLRVLRKVEAIVREEMNRAGAVEVLFPT 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +  + LW  +G W+ +   +  +K      +  + F   P             + SY++L
Sbjct: 74  IQPRELWDATGRWEKFGGQLLKIKD-----RKEQEFCYSPTAEEAAAEFARQEINSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKD 417
           P+   +  + +R+E      G+MR R F   DA+ F  T E M  E   +      I+  
Sbjct: 129 PLNFYQIQTKFRDEIRPRF-GVMRAREFLMKDAYSFHLTDEDMAREYDNMRAAYTRIFTR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDA 439
            G +   V+  +     +G DA
Sbjct: 188 LGLDFRAVQADS---GAIGGDA 206


>gi|323527403|ref|YP_004229556.1| prolyl-tRNA synthetase [Burkholderia sp. CCGE1001]
 gi|323384405|gb|ADX56496.1| prolyl-tRNA synthetase [Burkholderia sp. CCGE1001]
          Length = 578

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 7/130 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P V    LWQ+SG W+ Y   +   K  D    D   F + P +      +    +
Sbjct: 68  ELLMPAVQPAELWQESGRWEKYGPELLRFK--DRKQSD---FVIGPTHEEVVTDIARGQI 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLI 411
           KSYR+LPV   +  + +R+E      G+MR R F   DA+ F        E   K+++  
Sbjct: 123 KSYRQLPVNFYQIQTKFRDEIRPRF-GVMRGREFIMKDAYSFDKDAAGLRESYRKMYDAY 181

Query: 412 ISIYKDFGFE 421
           + I+   G +
Sbjct: 182 VRIFTRLGLD 191


>gi|289432002|ref|YP_003461875.1| alanyl-tRNA synthetase [Dehalococcoides sp. GT]
 gi|288945722|gb|ADC73419.1| alanyl-tRNA synthetase [Dehalococcoides sp. GT]
          Length = 876

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 23/216 (10%)

Query: 44  NGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIED 102
            G+V +    + E +   I  E  R +A   H+  HI+  A++ +  E VQ     +  D
Sbjct: 536 QGRVINGCLKISEAATAHINEERRRDIAR-NHTATHILQTALREVLGEQVQQRGSVVTPD 594

Query: 103 GFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAY 157
              +DF   +P S DE+ ++E+ + + I R+ P   + +++  A E     LF  +K   
Sbjct: 595 RLRFDFSHLKPMSKDEMRRVEEFVNDKIRRNLPVYAEEMAYRHALEEGVTALF-GEKYGD 653

Query: 158 KVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVA--GAYWRGDSNRP 215
           +V +L          + R     +LC G HV ++G++   FK+M  +  GA  R      
Sbjct: 654 RVRVLR---------VGRPAVSAELCGGTHVTASGEI-ALFKIMSESSVGAGLR--RIEA 701

Query: 216 MLSRIYGTAWNTQQE-LTQYLYFLEESEKRDHRKLA 250
           +  R      N QQ+ L++    LE + +   RKLA
Sbjct: 702 VTGREAEAFINLQQDSLSELSGMLESTAEESPRKLA 737


>gi|254427770|ref|ZP_05041477.1| prolyl-tRNA synthetase [Alcanivorax sp. DG881]
 gi|196193939|gb|EDX88898.1| prolyl-tRNA synthetase [Alcanivorax sp. DG881]
          Length = 572

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 39/169 (23%), Positives = 73/169 (43%), Gaps = 8/169 (4%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG+  W   G ++ + +   +R ++ +   +E+  P V    LW++SG   +Y   +  +
Sbjct: 37  SGLYTWLPSGLRVLRKVEQVIREEMDRAGAQEVLMPVVQPMELWEESGRAPAYGPELLRI 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
                T +    F L P +      +  + L SY++LP    +  + +R+E      G+M
Sbjct: 97  -----TDRHNNPFCLGPTHEEVITDMVRNELHSYKQLPANFYQIQTKFRDEIRPRF-GIM 150

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLKI-HNLIISIYKDFGFEKIMVKLST 429
           R R F   DA+ F T      +  +I H    +I+   G +   V+  T
Sbjct: 151 RSREFIMKDAYSFHTNMDSLADTYQIMHRAYCAIFDRLGLDYRPVEADT 199


>gi|300870022|ref|YP_003784893.1| prolyl-tRNA synthetase [Brachyspira pilosicoli 95/1000]
 gi|300687721|gb|ADK30392.1| prolyl-tRNA synthetase [Brachyspira pilosicoli 95/1000]
          Length = 571

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/131 (25%), Positives = 62/131 (47%), Gaps = 7/131 (5%)

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P ++ + L   SG W+ ++  +F +K  +D        A+ P +         + ++SY+
Sbjct: 65  PILVSKELLTPSGRWERFKKELFRLKDRNDV-----DMAMGPTHEEAFTITAQNEIQSYK 119

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIY 415
           +LPV L +  + +R+E      G++R + FT  DA+ F  TKE +      +      I+
Sbjct: 120 DLPVTLYQIHTKFRDEIRPRF-GVIRSKEFTMKDAYSFHITKECLDKTYNDMSGAYTKIF 178

Query: 416 KDFGFEKIMVK 426
           K  G + + VK
Sbjct: 179 KRMGLDTVSVK 189


>gi|298252610|ref|ZP_06976404.1| prolyl-tRNA synthetase [Gardnerella vaginalis 5-1]
 gi|297532974|gb|EFH71858.1| prolyl-tRNA synthetase [Gardnerella vaginalis 5-1]
          Length = 603

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 80/183 (43%), Gaps = 20/183 (10%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
           +I +   GV  W   G K+   + + +R +I     +E++ P +L +  ++ +  W+ Y 
Sbjct: 29  YIRKSAPGVWTWLPLGLKVLNKVQAIIRDEINGIGAQEVHFPALLPREPYEATNRWEEYG 88

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----SYRELPVRLAEFGSVYRN 371
            N+F +K  D    D        +  P H  VF   +K    SY++LPV L +  + YR+
Sbjct: 89  DNIFRLK--DRHQADY-------LLAPTHEEVFTLLVKDMYSSYKDLPVTLYQIQTKYRD 139

Query: 372 E--PSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC-LKIHNLIISIYKDFGFEKIMVKLS 428
           E  P     GL+R R F   DA+ F   E       ++       I+   G + ++V   
Sbjct: 140 EFRPRA---GLIRGREFIMQDAYSFSIDEDGLKSAYVEERAAYARIFDRLGIKYVIVHAV 196

Query: 429 TRP 431
           + P
Sbjct: 197 SGP 199


>gi|42779590|ref|NP_976837.1| prolyl-tRNA synthetase [Bacillus cereus ATCC 10987]
 gi|81411119|sp|Q73E50|SYP2_BACC1 RecName: Full=Prolyl-tRNA synthetase 2; AltName: Full=Proline--tRNA
           ligase 2; Short=ProRS 2
 gi|42735506|gb|AAS39445.1| prolyl-tRNA synthetase [Bacillus cereus ATCC 10987]
          Length = 476

 Score = 50.8 bits (120), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 82/400 (20%), Positives = 154/400 (38%), Gaps = 69/400 (17%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAV 321
           G +     G+ +++ +   M  K+K   +E +  P  + + L Q +  H + +   +  V
Sbjct: 37  GCMILRPYGYALWENMQKVMDEKLKATGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWV 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
               D  K      ++P +       F+  ++SY +LP    ++ SV R E +      +
Sbjct: 97  THGGDE-KLAERLCIRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKT--TRPFL 153

Query: 382 RVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           R   F   + H +  T E+   E L I NL  S  +D+    ++    T  EK  G+ A 
Sbjct: 154 RTTEFLWQEGHTIHETAEESQAETLNILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKAT 213

Query: 441 WDDAENIMKGVLDTIKNSSQD--RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
           +            TI++   D   + TG     G  +   F+    D  G+ WQ      
Sbjct: 214 Y------------TIESLMHDGKALQTGTSHNFGTNFSEAFDIKFLDRNGK-WQ------ 254

Query: 499 DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQ 554
                                   +H+  +G   R IG +I     N    +P  ++P+Q
Sbjct: 255 -----------------------YVHQTSWGVSARMIGGLIMVHSDNNGLVMPPKVAPVQ 291

Query: 555 AIVTTIT-------SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIII 607
            ++  I        + A E  + I  + +     ++ D  N+T  +K  E+ +K IPI +
Sbjct: 292 VVIVPIAQHKEGVLAKATELQEHIQKVAR-----VKIDASNKTPGWKFNEYEMKGIPIRL 346

Query: 608 ICGDKEASERSIGIRRFGSTTTQKVS---LLDAIPILTKE 644
             G K+  +  + + R  +   + ++   L + IP L +E
Sbjct: 347 EVGPKDIEKNQVVLVRRDTKEKEFIAMEQLEERIPALLEE 386


>gi|56416520|ref|YP_153594.1| alanyl-tRNA synthetase [Anaplasma marginale str. St. Maries]
 gi|81599193|sp|Q5PBJ0|SYA_ANAMM RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|56387752|gb|AAV86339.1| alanyl-tRNA synthetase [Anaplasma marginale str. St. Maries]
          Length = 882

 Score = 50.8 bits (120), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 37/156 (23%), Positives = 71/156 (45%), Gaps = 13/156 (8%)

Query: 43  INGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQS-IWPEVQVAIGPIIE 101
           I   V ++ D V + +I++    D R      HS  HI+   +++ I   +Q     + E
Sbjct: 549 ITSGVFNVGDTV-DAAIDV----DRRERLKANHSATHILHSVLRTHIDGNIQQKGSLVAE 603

Query: 102 DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEI 161
           D   +DF+     + +++A IE+++   I  + P L  + S       FE+  +   + +
Sbjct: 604 DKLRFDFNYASALTKEQIALIEREVNRRIMSNKPVLTDHCS-------FEAAVQGGAIAL 656

Query: 162 LESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
                ++ +V +   G+  +LC G HVR TG +  F
Sbjct: 657 FGEKYSEHSVRVVSMGDSKELCGGTHVRYTGDIGAF 692


>gi|260428562|ref|ZP_05782541.1| prolyl-tRNA synthetase [Citreicella sp. SE45]
 gi|260423054|gb|EEX16305.1| prolyl-tRNA synthetase [Citreicella sp. SE45]
          Length = 447

 Score = 50.8 bits (120), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 41/183 (22%), Positives = 79/183 (43%), Gaps = 11/183 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  +G+  W   G+K+ + + + +   + +  +  +  P +    LW++SG +D+Y A
Sbjct: 32  IKQASAGIYSWLPMGFKVLRKIENIIHEEQQRAGHIPMLMPTIQSAELWRESGRYDAYGA 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  +    D     R     P        +F   + SYR+LP+ + +    +R+E    
Sbjct: 92  EMLRITDRHD-----REMLFTPTAEELITDIFRANVSSYRDLPLTMYQIQWKFRDEIRPR 146

Query: 377 LHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
             G+MR R F   D + F  TKE   +   +     +  Y+  G + I ++  + P   +
Sbjct: 147 F-GVMRGREFLMKDGYNFDLTKEDALHAYNRHLVSYLRTYERMGLQAIPMRADSGP---I 202

Query: 436 GSD 438
           G D
Sbjct: 203 GGD 205


>gi|224541864|ref|ZP_03682403.1| hypothetical protein CATMIT_01036 [Catenibacterium mitsuokai DSM
           15897]
 gi|224525214|gb|EEF94319.1| hypothetical protein CATMIT_01036 [Catenibacterium mitsuokai DSM
           15897]
          Length = 479

 Score = 50.8 bits (120), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 79/401 (19%), Positives = 164/401 (40%), Gaps = 69/401 (17%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK 322
           G I +   G+ +++ + SY+ ++ K+  ++ +  P ++ + L  +    +      FA +
Sbjct: 39  GFIIYRPYGYALWEQIQSYLDKRFKETGHQNVYMPMLIPESLLNK----EKDHVEGFAPE 94

Query: 323 CADDT---IKDLRT-FALKPMN----CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
           CA  T   + DL     ++P +    C  +  + N    SYR+LP +  ++ SV R E +
Sbjct: 95  CAVVTKGGLDDLEEHLIVRPTSETLFCEHYAKIVN----SYRDLPKKYNQWCSVVRWEKT 150

Query: 375 GSLHGLMRVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
                 +R   F   + H +  T+E+  +E L + ++     K+     ++    T  EK
Sbjct: 151 --TRPFLRGSEFLWQEGHTIHATEEEARSETLMMRDIYEETAKELLAIPMLTGRKTEREK 208

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
             G++  +            TI+    D     +  G   ++G  F              
Sbjct: 209 FAGAEETY------------TIEALMHD--GKALQSGTSHYFGQGF-------------- 240

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG--IMIENFKGNL--PLW 549
                       FN  +++  ++  H   +++  +G   R +G  IM+      L  P  
Sbjct: 241 ---------AKAFNMTFLDKDNKLKH---VYQTSWGVSTRLLGAIIMVHGDDNGLVLPPR 288

Query: 550 LSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPII 606
           L+P Q ++  I    +  +E A EIA  LK+  + +  D  +++  +K  E  ++ IP+ 
Sbjct: 289 LAPTQVVIIPIQQKKAGVLEKADEIAAQLKAAGMRVSVDASDKSPGWKFSEAEMRGIPVR 348

Query: 607 IICGDKEASE-RSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           I  G ++      + ++R     TQ + L + +P    ++L
Sbjct: 349 IEVGPRDIENGHCVVVKRNDGVKTQ-MDLDENLPQAIHDTL 388


>gi|170695316|ref|ZP_02886462.1| prolyl-tRNA synthetase [Burkholderia graminis C4D1M]
 gi|170139716|gb|EDT07898.1| prolyl-tRNA synthetase [Burkholderia graminis C4D1M]
          Length = 578

 Score = 50.8 bits (120), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 7/130 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P V    LWQ+SG W+ Y   +   K  D    D   F + P +      +    +
Sbjct: 68  ELLMPAVQPAELWQESGRWEKYGPELLRFK--DRKQSD---FVIGPTHEEVVTDIARGQI 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLI 411
           KSYR+LPV   +  + +R+E      G+MR R F   DA+ F        E   K+++  
Sbjct: 123 KSYRQLPVNFYQIQTKFRDEIRPRF-GVMRGREFIMKDAYSFDKDAAGLRESYRKMYDAY 181

Query: 412 ISIYKDFGFE 421
           + I+   G +
Sbjct: 182 VRIFTRLGLD 191


>gi|49475642|ref|YP_033683.1| prolyl-tRNA synthetase [Bartonella henselae str. Houston-1]
 gi|81827712|sp|Q6G3A4|SYP_BARHE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|49238449|emb|CAF27677.1| Prolyl-tRNA synthetase [Bartonella henselae str. Houston-1]
          Length = 441

 Score = 50.8 bits (120), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 47/170 (27%), Positives = 74/170 (43%), Gaps = 15/170 (8%)

Query: 231 LTQYLYFL-----EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
           L+QY   L     +E+E   HR + R      I +  SG+  W   G K+   +   +R 
Sbjct: 3   LSQYFLPLLKENPKEAEIISHRLMLRAG---MIRQQTSGIYSWLPLGKKVLDKICKIIRE 59

Query: 286 -KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
            + +    EI  P +    LW++S  +D Y   M  +K  D   +DL      P N    
Sbjct: 60  EQERAGAIEILMPTIQSADLWRESDRYDDYGLEMLRIK--DRQKRDL---LYGPTNEEMV 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
             +F   ++SY++LP+ L      +R+E      G+MR R F   DA+ F
Sbjct: 115 TDIFRSYIRSYKDLPLNLYHIQWKFRDEIRPRF-GVMRSREFLMKDAYSF 163


>gi|77748729|ref|NP_643874.2| prolyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str. 306]
 gi|114152277|sp|Q8PGP9|SYP_XANAC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
          Length = 564

 Score = 50.8 bits (120), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 43/202 (21%), Positives = 84/202 (41%), Gaps = 14/202 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E   HR + R   +  +A   SG+  W   G ++ + + + +R ++ +    E+  P 
Sbjct: 17  DAELVSHRLMLRAGMIRKLA---SGLYTWSPLGLRVLRKVEAIVREEMNRAGAVEVLFPT 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +  + LW  +G W+ +   +  +K   +     + F   P             + SY++L
Sbjct: 74  IQPRELWDATGRWEKFGGQLLKIKDRKE-----QEFCYSPTAEEAAAEFARQEINSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKD 417
           P+   +  + +R+E      G+MR R F   DA+ F  T E M  E   +      I+  
Sbjct: 129 PLNFYQIQTKFRDEIRPRF-GVMRAREFLMKDAYSFHLTDEDMAREYDNMRAAYTRIFTR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDA 439
            G +   V+  +     +G DA
Sbjct: 188 LGLDFRAVQADS---GAIGGDA 206


>gi|88813103|ref|ZP_01128344.1| alanyl-tRNA synthetase [Nitrococcus mobilis Nb-231]
 gi|88789587|gb|EAR20713.1| alanyl-tRNA synthetase [Nitrococcus mobilis Nb-231]
          Length = 869

 Score = 50.8 bits (120), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 68/140 (48%), Gaps = 11/140 (7%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKM 126
           R   V+ HS  H++  A++ +  E     G ++  D   +DF   +P S ++L ++E+ +
Sbjct: 550 RQATVLNHSATHLLHAALRRVLGEHAQQKGSLVAPDRLRFDFTHFEPVSREQLERVERLV 609

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRG 185
            + I  +     +Y+S+++A +        +    L      + V + R GE+  +LC G
Sbjct: 610 NDRIRANDVADVRYMSYDEAMD--------FGAVALFGEKYADTVRVMRFGEFSTELCGG 661

Query: 186 PHVRSTGQVKKFFKLMKVAG 205
            HVR TG +  FFKL+   G
Sbjct: 662 THVRRTGDI-GFFKLVSETG 680


>gi|325928567|ref|ZP_08189755.1| prolyl-tRNA synthetase, family II [Xanthomonas perforans 91-118]
 gi|325541106|gb|EGD12660.1| prolyl-tRNA synthetase, family II [Xanthomonas perforans 91-118]
          Length = 564

 Score = 50.8 bits (120), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 43/202 (21%), Positives = 84/202 (41%), Gaps = 14/202 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E   HR + R   +  +A   SG+  W   G ++ + + + +R ++ +    E+  P 
Sbjct: 17  DAELVSHRLMLRAGMIRKLA---SGLYTWSPLGLRVLRKVEAIVREEMNRAGAVEVLFPT 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +  + LW  +G W+ +   +  +K   +     + F   P             + SY++L
Sbjct: 74  IQPRELWDATGRWEKFGGQLLKIKDRKE-----QEFCYSPTAEEAAAEFARQEINSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKD 417
           P+   +  + +R+E      G+MR R F   DA+ F  T E M  E   +      I+  
Sbjct: 129 PLNFYQIQTKFRDEIRPRF-GVMRAREFLMKDAYSFHLTDEDMAREYDNMRAAYTRIFTR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDA 439
            G +   V+  +     +G DA
Sbjct: 188 LGLDFRAVQADS---GAIGGDA 206


>gi|284929738|ref|YP_003422260.1| prolyl-tRNA synthetase, family II [cyanobacterium UCYN-A]
 gi|284810182|gb|ADB95879.1| prolyl-tRNA synthetase, family II [cyanobacterium UCYN-A]
          Length = 606

 Score = 50.8 bits (120), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 70/157 (44%), Gaps = 9/157 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E   H+ L R     +I    SG+  +    W++ +     +R ++     +E   PQ
Sbjct: 17  EAEIISHKLLLRSC---YIRRVSSGIYSYLPLMWRVLRKTSQIIREEMNSIGGQECLLPQ 73

Query: 299 VLDQHLWQQSGHWDSY-RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           +    LW++SG W +Y  A        D   +  R  AL P +     ++    + SY++
Sbjct: 74  LQISDLWEESGRWKTYTEAEGIMFSLID---RQNRELALGPTHEEVVTSIVRDMVVSYKQ 130

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           +P+ L +  + +R+E      GLMR R F   DA+ F
Sbjct: 131 MPLNLYQIQTKFRDEIRPRF-GLMRSREFIMKDAYSF 166


>gi|196045229|ref|ZP_03112461.1| prolyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|196023813|gb|EDX62488.1| prolyl-tRNA synthetase [Bacillus cereus 03BB108]
          Length = 476

 Score = 50.8 bits (120), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 83/400 (20%), Positives = 153/400 (38%), Gaps = 69/400 (17%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAV 321
           G +     G+ +++ +   M  K+K   +E +  P  + + L Q +  H + +   +  V
Sbjct: 37  GCMILRPYGYALWENMQKVMDEKLKATSHENVYMPMFIPESLLQKEKDHVEGFAPEVAWV 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
               D  K      ++P +       F+  ++SY +LP    ++ SV R E +      +
Sbjct: 97  THGGDE-KLAERLCIRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKT--TRPFL 153

Query: 382 RVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           R   F   + H +  T E+   E L I NL  S  +D+    ++    T  EK  G+ A 
Sbjct: 154 RTTEFLWQEGHTIHETAEESQAETLNILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKAT 213

Query: 441 WDDAENIMKGVLDTIKNSSQD--RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
           +            TI++   D   + TG     G  +   F+    D  G+ WQ      
Sbjct: 214 Y------------TIESLMHDGKALQTGTSHNFGTNFSEAFDIKFLDRNGK-WQ------ 254

Query: 499 DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQ 554
                                   +H+  +G   R IG +I     N    +P  ++P+Q
Sbjct: 255 -----------------------YVHQTSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQ 291

Query: 555 AIVTTIT-------SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIII 607
            ++  I        + A E    I  + +     ++ D  N+T  +K  E+ +K IPI +
Sbjct: 292 VVIVPIAQHKEGVLAKATELQGHIQKVAR-----VKIDASNKTPGWKFNEYEMKGIPIRL 346

Query: 608 ICGDKEASERSIGIRRFGSTTTQKVS---LLDAIPILTKE 644
             G K+  +  + + R  +   + +S   L + IP L +E
Sbjct: 347 EVGPKDIEKNQVVLVRRDTKEKEFISMDQLEERIPALLEE 386


>gi|317164487|gb|ADV08028.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 599

 Score = 50.8 bits (120), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 64/139 (46%), Gaps = 9/139 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I  + SG+  W   G ++ + + + +R ++ +    E+  P V    LWQ+SG W+ Y  
Sbjct: 61  IKANASGLYTWMPMGLRVLRKVENVVREEMARAGSVELLMPVVQPAELWQESGRWEFYGK 120

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVA-VFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            +  +K   +     R F + P  C   +A +    + SY++LP       + +R+E   
Sbjct: 121 ELLRLKDRHE-----RDFCMGP-TCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEVRP 174

Query: 376 SLHGLMRVRGFTQDDAHVF 394
              G+MR R F   DA+ F
Sbjct: 175 RF-GVMRAREFVMKDAYSF 192


>gi|56696018|ref|YP_166372.1| prolyl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
 gi|81820109|sp|Q5LUD3|SYP_SILPO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|56677755|gb|AAV94421.1| prolyl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
          Length = 464

 Score = 50.8 bits (120), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 44/183 (24%), Positives = 79/183 (43%), Gaps = 11/183 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  +G+  W   G+K+ + L + +   +I+  +  +  P +    LW++SG +D Y  
Sbjct: 32  IKQAQAGIYSWLPLGFKVLRKLENIVHEEQIRAGHIPMLMPTLQSADLWRESGRYDDYGQ 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  +     T +  R     P N      +F   + SY++LP+ L      +R+E    
Sbjct: 92  EMLRI-----TDRHGRDMLFGPTNEELITDIFRGHVSSYKDLPLTLYHIQWKFRDEIRPR 146

Query: 377 LHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
             G+MR R F   D + F  TKE   +   +     I  Y+  G + I ++  + P   +
Sbjct: 147 F-GVMRGREFLMKDGYNFDLTKEDALHAYNRHLVSYIRTYERMGLQAIPMRADSGP---I 202

Query: 436 GSD 438
           G D
Sbjct: 203 GGD 205


>gi|290957026|ref|YP_003488208.1| prolyl tRNA synthetase [Streptomyces scabiei 87.22]
 gi|260646552|emb|CBG69649.1| prolyl tRNA synthetase [Streptomyces scabiei 87.22]
          Length = 567

 Score = 50.8 bits (120), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 39/170 (22%), Positives = 78/170 (45%), Gaps = 10/170 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R     ++    +GV  W   G K+   +   +R ++     +E+  P 
Sbjct: 23  DAEVLSHKLLVRA---GYVRRTAAGVWTWLPLGKKVLANVERIVREEMDAIGAQEVLLPA 79

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++ +G WD Y   +F +K  D    D   + L P +      +      SY++L
Sbjct: 80  LLPKEPYEATGRWDEYGPELFRLK--DRKGGD---YLLGPTHEEIFTLIVKDQASSYKDL 134

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
           PV L +  + +R+E +    G++R R F   D++ F T+++   +   +H
Sbjct: 135 PVILYQIQTKFRDE-ARPRAGILRGREFLMKDSYSFDTEDEGLAQSYALH 183


>gi|126325359|ref|XP_001374495.1| PREDICTED: similar to mitochondrial ribosomal protein L39
           [Monodelphis domestica]
          Length = 455

 Score = 50.8 bits (120), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 89/192 (46%), Gaps = 22/192 (11%)

Query: 20  HATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT--PEDPRSL-AVIRH 75
           H+T  + A  +S     K++   ++G+  D++ P+ +   I+ +T   EDP  +      
Sbjct: 202 HSTPYNCAMHLSEWYCTKSILALVDGQPWDMNKPLTKSCEIKFLTFKDEDPEEVNKAYWR 261

Query: 76  SCAHIMAEAVQSIWPE------VQVAIGPIIEDGFYYD--FDK---EQPFSSDELAQIEK 124
           SCA +M   ++  + +      V+V   P+I   F YD   DK   E   + ++L    K
Sbjct: 262 SCAMMMGCVIEKAFKDEYTVTLVRVPEIPVIAGAFCYDVILDKRLDEWIPTPEDLRSFTK 321

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN----VTLYRQGEWF 180
               +I RD PF    +  + A E+F+  K  YK + +E   A EN    + L+R G++ 
Sbjct: 322 DAHVLINRDLPFETLDIEAKLALEIFQHNK--YKAQFIEE-KASENPERLIQLHRFGDFV 378

Query: 181 DLCRGPHVRSTG 192
           D+  GP +  T 
Sbjct: 379 DVSEGPLISRTS 390


>gi|255711434|ref|XP_002552000.1| KLTH0B04906p [Lachancea thermotolerans]
 gi|238933378|emb|CAR21562.1| KLTH0B04906p [Lachancea thermotolerans]
          Length = 568

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 81/170 (47%), Gaps = 15/170 (8%)

Query: 255 LFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD--YEEINTPQVLDQHLWQQSGHWD 312
           L +I +  SG++ W   G +    + + ++ +++ D   EE++   +  + LW  +  WD
Sbjct: 37  LGYIKQTQSGLVHWLPLGLRTLNKITNIIKHRMETDGKAEEVSLSLLSPKSLWVHTNRWD 96

Query: 313 SYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE 372
           +    +F +K  D    D   + L P       ++    + SY++LP+ + + G  YR+E
Sbjct: 97  N--GELFKLK--DSKGSD---YCLAPTCEEEITSLIGSYVTSYKDLPMTVYQVGRKYRDE 149

Query: 373 --PSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFG 419
             P G   GL+R R F   DA+ F  +KE+       +++    I+KD G
Sbjct: 150 KRPRG---GLLRGREFLMKDAYSFDASKEEAVRTFESMNHTYDLIFKDLG 196


>gi|228937684|ref|ZP_04100320.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228970572|ref|ZP_04131222.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228977142|ref|ZP_04137543.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis Bt407]
 gi|228782590|gb|EEM30767.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis Bt407]
 gi|228789159|gb|EEM37088.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228821971|gb|EEM67963.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|326938179|gb|AEA14075.1| prolyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 476

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 84/396 (21%), Positives = 152/396 (38%), Gaps = 61/396 (15%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHLWQ-QSGHWDSYRANMFAV 321
           G +     G+ +++ +   M  K+K+  +E +  P  + + L Q +  H + +   +  V
Sbjct: 37  GCMILRPYGYALWENMQKVMDEKLKETGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWV 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
               D  K      ++P +       F+  ++SY +LP    ++ SV R E +      +
Sbjct: 97  THGGDE-KLAERLCVRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKT--TRPFL 153

Query: 382 RVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           R   F   + H +  T E+   E L I NL  S  +D+    ++    T  EK  G+ A 
Sbjct: 154 RTTEFLWQEGHTIHETAEESQAETLNILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKAT 213

Query: 441 WDDAENIMKGVLDTIKNSSQD--RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
           +            TI++   D   + TG     G  +   F+    D  G+ WQ      
Sbjct: 214 Y------------TIESLMHDGKALQTGTSHNFGTNFSEAFDIKFLDRNGK-WQ------ 254

Query: 499 DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQ 554
                                   +H+  +G   R IG +I     N    +P  ++P+Q
Sbjct: 255 -----------------------YVHQTSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQ 291

Query: 555 AIVTTITSSAVEYAQEIANLLKSH---HLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
            ++  I     E     A  L+ H      ++ D  N+T  +K  E+ +K IPI +  G 
Sbjct: 292 VVIVPIAQHK-EGVLAKATELQGHIQKVARVKIDASNKTPGWKFNEYEMKGIPIRLEVGP 350

Query: 612 KEASERSIGIRRFGSTTTQKV---SLLDAIPILTKE 644
           K+  +  + + R  +   + V    L + IP L +E
Sbjct: 351 KDIEKNQVVLVRRDTKEKEFVPMDQLEERIPALLEE 386


>gi|194477323|ref|YP_002049502.1| prolyl-tRNA synthetase [Paulinella chromatophora]
 gi|171192330|gb|ACB43292.1| prolyl-tRNA synthetase [Paulinella chromatophora]
          Length = 604

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 61/130 (46%), Gaps = 10/130 (7%)

Query: 273 WKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRAN---MFAVKCADDTI 328
           W++ + + S +R ++      E+  PQ+    +WQ S  W  Y      MF +K      
Sbjct: 47  WRVLKKISSCVREEMTSAGAIELLMPQLQPADIWQLSKRWAGYTQGEGIMFNLKD----- 101

Query: 329 KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQ 388
           +  R  AL P +      + ++ +KSYR+LP  L +  + +R+E      GLMR R F  
Sbjct: 102 RQGRELALGPTHEEVVTNLVDNLIKSYRQLPCTLYQIQTKFRDEIRPRF-GLMRSREFVM 160

Query: 389 DDAHVFCTKE 398
            DA+ F + E
Sbjct: 161 KDAYSFHSSE 170


>gi|162138530|ref|YP_365423.2| prolyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria str.
           85-10]
 gi|114152278|sp|Q3BP90|SYP_XANC5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
          Length = 564

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 43/202 (21%), Positives = 84/202 (41%), Gaps = 14/202 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E   HR + R   +  +A   SG+  W   G ++ + + + +R ++ +    E+  P 
Sbjct: 17  DAELVSHRLMLRAGMIRKLA---SGLYTWSPLGLRVLRKVEAIVREEMNRAGAVEVLFPT 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +  + LW  +G W+ +   +  +K   +     + F   P             + SY++L
Sbjct: 74  IQPRELWDATGRWEKFGGQLLKIKDRKE-----QEFCYSPTAEEAAAEFARQEINSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKD 417
           P+   +  + +R+E      G+MR R F   DA+ F  T E M  E   +      I+  
Sbjct: 129 PLNFYQIQTKFRDEIRPRF-GVMRAREFLMKDAYSFHLTDEDMAREYDNMRAAYTRIFTR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDA 439
            G +   V+  +     +G DA
Sbjct: 188 LGLDFRAVQADS---GAIGGDA 206


>gi|319405682|emb|CBI79305.1| Prolyl-tRNA synthetase [Bartonella sp. AR 15-3]
          Length = 441

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 67/157 (42%), Gaps = 10/157 (6%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTP 297
           +E+E   HR + R      I +  SG+  W   G K+   +   +R  + +    EI  P
Sbjct: 16  KEAEVVSHRFMLRAG---MIRQQTSGIYSWLPLGKKVLDKICKIIREEQERIGALEILMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW++S  ++ Y   M  +K   D     R     P N      +F   ++SY++
Sbjct: 73  TIQSADLWRESNRYNDYGLEMLRIKDRQD-----RDLLYGPTNEEMVTDIFRSYVRSYKD 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           LP+ L      +R+E      G+MR R F   DA+ F
Sbjct: 128 LPLNLYHIQWKFRDEIRPRF-GVMRAREFLMKDAYSF 163


>gi|296187093|ref|ZP_06855491.1| TGS domain protein [Clostridium carboxidivorans P7]
 gi|296048287|gb|EFG87723.1| TGS domain protein [Clostridium carboxidivorans P7]
          Length = 90

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 1/81 (1%)

Query: 5  IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
          +K+T  DGS+         +DVA  +S SLAKKA+   I+G+  +L   V  +  +EI+T
Sbjct: 2  VKITLKDGSLIEVEKGTKVADVAAKLSTSLAKKALGAKIDGERAELMAEVNNDCKLEILT 61

Query: 64 PEDPRSLAVIRHSCAHIMAEA 84
           +D     ++RH+ +HI+A+A
Sbjct: 62 FDDEDGKWILRHTGSHILAQA 82


>gi|313899944|ref|ZP_07833446.1| phosphoribulokinase/uridine kinase family protein [Clostridium sp.
           HGF2]
 gi|312955252|gb|EFR36918.1| phosphoribulokinase/uridine kinase family protein [Clostridium sp.
           HGF2]
          Length = 588

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 37/149 (24%), Positives = 78/149 (52%), Gaps = 5/149 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAV-AVAINGKVCDLSDPVRE-GSIEII 62
           ++L    G +K       G+ V E +     K+AV AV ++GK+ DL+  +++ G+++ I
Sbjct: 50  LELKLKSGEVKQCE---AGAYVHELLEAWNVKEAVYAVTLDGKLHDLNYRIKKSGALDYI 106

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
             +      +   S   +   AV+S++P+ +V +   +  G Y + DKE      ++ +I
Sbjct: 107 YADSETGKLIYERSLNFLFIVAVRSLFPDARVRMEHALSGGQYCEIDKEGYCKPQDVRKI 166

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFE 151
           EK+M+E+IA +    ++ ++  +A+  F+
Sbjct: 167 EKRMKELIAANEVIHRRVVATAEAQAYFD 195


>gi|268595028|ref|ZP_06129195.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|268599257|ref|ZP_06133424.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|268686874|ref|ZP_06153736.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
 gi|268548417|gb|EEZ43835.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|268583388|gb|EEZ48064.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|268627158|gb|EEZ59558.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
          Length = 580

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 64/139 (46%), Gaps = 9/139 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I  + SG+  W   G ++ + + + +R ++ +    E+  P V    LWQ+SG W+ Y  
Sbjct: 42  IKANASGLYTWMPMGLRVLRKVENVVREEMARAGSVELLMPVVQPAELWQESGRWEFYGK 101

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVA-VFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            +  +K   +     R F + P  C   +A +    + SY++LP       + +R+E   
Sbjct: 102 ELLRLKDRHE-----RDFCMGP-TCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEVRP 155

Query: 376 SLHGLMRVRGFTQDDAHVF 394
              G+MR R F   DA+ F
Sbjct: 156 RF-GVMRAREFVMKDAYSF 173


>gi|316933915|ref|YP_004108897.1| prolyl-tRNA synthetase [Rhodopseudomonas palustris DX-1]
 gi|315601629|gb|ADU44164.1| prolyl-tRNA synthetase [Rhodopseudomonas palustris DX-1]
          Length = 439

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 88/202 (43%), Gaps = 14/202 (6%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTP 297
           +E+E   HR + R   L    ++ +G+  W   G ++ + +   +R  + +    E+  P
Sbjct: 16  KEAEIVSHRLMLRAGML---RQEAAGIYAWLPLGHRVLKKIEQIVREEQNRAGAIELLMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW++SG +D+Y   M  ++ AD   +  R     P N      +F   +KSY+ 
Sbjct: 73  TLQLADLWRESGRYDAYGPEM--LRIAD---RHKRELLYGPTNEEMITEIFRAYIKSYKS 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYK 416
           LP+ L      +R+E      G+MR R F   DA+ F   E    +   K+    +  + 
Sbjct: 128 LPLNLYHIQWKFRDEQRPRF-GVMRGREFLMKDAYSFDVDEAGARKSYNKMFVAYLRTFA 186

Query: 417 DFGFEKIMVKLSTRPEKRVGSD 438
             G + I ++  T P   +G D
Sbjct: 187 RMGLKAIPMRAETGP---IGGD 205


>gi|282859273|ref|ZP_06268390.1| phosphoribulokinase/uridine kinase family protein [Prevotella bivia
           JCVIHMP010]
 gi|282587955|gb|EFB93143.1| phosphoribulokinase/uridine kinase family protein [Prevotella bivia
           JCVIHMP010]
          Length = 553

 Score = 50.4 bits (119), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 40/188 (21%), Positives = 86/188 (45%), Gaps = 2/188 (1%)

Query: 11  DGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRS 69
           +G + N P+ +T +++ + +   L    V+  +N KV  L   V  +  IE +       
Sbjct: 12  NGKVLNAPIGSTLAEIYKQLDLGLQYGPVSARVNNKVEGLHYRVYHDKDIEYLDLYTSSG 71

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           +     S   ++ +AV  ++   +V I   + +G+Y +       +  ++ +I ++MQ+I
Sbjct: 72  IRTYTRSLFMVLCKAVHDLYSGSEVVIDIPVSNGYYCNLRLGHEVTKADVDKIRERMQQI 131

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
           I    P  +   + E+A E+F    +  KV++L++  +   V  Y   ++ D   G  + 
Sbjct: 132 IDAHLPLQRFEATTEEAIEMFAKLGDEAKVKLLKNSSSLYTV-YYVLDDYTDYYYGSMLT 190

Query: 190 STGQVKKF 197
           +T Q+  F
Sbjct: 191 NTAQLTLF 198


>gi|229171240|ref|ZP_04298831.1| Prolyl-tRNA synthetase 2 [Bacillus cereus MM3]
 gi|228612233|gb|EEK69464.1| Prolyl-tRNA synthetase 2 [Bacillus cereus MM3]
          Length = 476

 Score = 50.4 bits (119), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 83/400 (20%), Positives = 153/400 (38%), Gaps = 69/400 (17%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAV 321
           G +     G+ +++ +   M  K+K   +E +  P  + + L Q +  H + +   +  V
Sbjct: 37  GCMILRPYGYALWENMQKVMDEKLKATGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWV 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
               D  K      ++P +       F+  ++SY +LP    ++ SV R E +      +
Sbjct: 97  THGGDE-KLAERLCVRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKT--TRPFL 153

Query: 382 RVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           R   F   + H +  T E+   E L I NL  S  +D+    ++    T  EK  G+ A 
Sbjct: 154 RTTEFLWQEGHTIHETAEESQAETLHILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKAT 213

Query: 441 WDDAENIMKGVLDTIKNSSQD--RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
           +            TI++   D   + TG     G  +   F+    D  G+ WQ      
Sbjct: 214 Y------------TIESLMHDGKALQTGTSHNFGTNFSEAFDIKFLDRNGK-WQ------ 254

Query: 499 DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQ 554
                                   +H+  +G   R IG +I     N    +P  ++P+Q
Sbjct: 255 -----------------------YVHQTSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQ 291

Query: 555 AIVTTIT-------SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIII 607
            ++  I        + A E  + I  + +     ++ D  N+T  +K  E+ +K IPI +
Sbjct: 292 VVIVPIAQHKEGVLAKATELQEHIQKVAR-----VKIDASNKTPGWKFNEYEMKGIPIRL 346

Query: 608 ICGDKEASERSIGIRRFGSTTTQKVS---LLDAIPILTKE 644
             G K+  +  + + R  +   + +S   L   IP L +E
Sbjct: 347 EVGPKDIEKNQVVLVRRDTKEKEFISMDQLEKRIPALLEE 386


>gi|119774298|ref|YP_927038.1| prolyl-tRNA synthetase [Shewanella amazonensis SB2B]
 gi|152016599|sp|A1S4R2|SYP_SHEAM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|119766798|gb|ABL99368.1| prolyl-tRNA synthetase [Shewanella amazonensis SB2B]
          Length = 572

 Score = 50.4 bits (119), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 36/150 (24%), Positives = 68/150 (45%), Gaps = 7/150 (4%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I  + SG+  +   G ++ + + + +R ++ K    EI  P V    LW ++G WD +  
Sbjct: 32  IRRNASGLYSYLPTGLRVLRKVEAIVREEMNKAGAIEILMPMVQPGDLWVETGRWDQFGP 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            +        T +  R F L P +      +    + SY++LP+ L +  + +R+E    
Sbjct: 92  ELLRF-----TDRHNRDFVLGPTHEEVITDLIRKEVSSYKQLPLNLYQIQTKFRDEVRPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
             G+MR R F   DA+ F   ++  +E  +
Sbjct: 147 F-GVMRSREFLMKDAYSFHLTQETLDETYQ 175


>gi|269219602|ref|ZP_06163456.1| proline--tRNA ligase [Actinomyces sp. oral taxon 848 str. F0332]
 gi|269210844|gb|EEZ77184.1| proline--tRNA ligase [Actinomyces sp. oral taxon 848 str. F0332]
          Length = 594

 Score = 50.4 bits (119), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 76/168 (45%), Gaps = 18/168 (10%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   HR L R     +I     G+  W   G ++ + +   +R +++    +E++ P 
Sbjct: 15  DAEVASHRLLVRAG---YIRRAAPGIYTWLPLGLRVLRKIERIVREEMEAAGSQEVHFPA 71

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L +  ++ SG W  Y   +F +K  D    D        +  P H  +F   +K    S
Sbjct: 72  LLPREPYEASGRWSDYGPTLFKLK--DRKESDY-------LLAPTHEELFTLLVKDMYSS 122

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN 402
           Y++LP+ L +  + YR+E +    G++R R F   DA+ F   E   +
Sbjct: 123 YKDLPLSLYQIQTKYRDE-ARPRAGVIRSREFVMKDAYSFDVDEAGLD 169


>gi|194098918|ref|YP_002001983.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae NCCP11945]
 gi|291043544|ref|ZP_06569260.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
 gi|293398861|ref|ZP_06643026.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae F62]
 gi|193934208|gb|ACF30032.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae NCCP11945]
 gi|291012007|gb|EFE03996.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
 gi|291610275|gb|EFF39385.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae F62]
          Length = 599

 Score = 50.4 bits (119), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 64/139 (46%), Gaps = 9/139 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I  + SG+  W   G ++ + + + +R ++ +    E+  P V    LWQ+SG W+ Y  
Sbjct: 61  IKANASGLYTWMPMGLRVLRKVENVVREEMARAGSVELLMPVVQPAELWQESGRWEFYGK 120

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVA-VFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            +  +K   +     R F + P  C   +A +    + SY++LP       + +R+E   
Sbjct: 121 ELLRLKDRHE-----RDFCMGP-TCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEVRP 174

Query: 376 SLHGLMRVRGFTQDDAHVF 394
              G+MR R F   DA+ F
Sbjct: 175 RF-GVMRAREFVMKDAYSF 192


>gi|118138193|pdb|2I4L|A Chain A, Rhodopseudomonas Palustris Prolyl-Trna Synthetase
 gi|118138194|pdb|2I4L|B Chain B, Rhodopseudomonas Palustris Prolyl-Trna Synthetase
 gi|118138195|pdb|2I4L|C Chain C, Rhodopseudomonas Palustris Prolyl-Trna Synthetase
 gi|118138196|pdb|2I4M|A Chain A, Rhodopseudomonas Palustris Prolyl-Trna Synthetase In
           Complex With Proams
 gi|118138197|pdb|2I4M|B Chain B, Rhodopseudomonas Palustris Prolyl-Trna Synthetase In
           Complex With Proams
 gi|118138198|pdb|2I4M|C Chain C, Rhodopseudomonas Palustris Prolyl-Trna Synthetase In
           Complex With Proams
 gi|118138199|pdb|2I4N|A Chain A, Rhodopseudomonas Palustris Prolyl-Trna Synthetase In
           Complex With Cysams
 gi|118138200|pdb|2I4N|B Chain B, Rhodopseudomonas Palustris Prolyl-Trna Synthetase In
           Complex With Cysams
 gi|118138201|pdb|2I4N|C Chain C, Rhodopseudomonas Palustris Prolyl-Trna Synthetase In
           Complex With Cysams
 gi|118138202|pdb|2I4O|A Chain A, Rhodopseudomonas Palustris Prolyl-Trna Synthetase In
           Complex With Atp
 gi|118138203|pdb|2I4O|B Chain B, Rhodopseudomonas Palustris Prolyl-Trna Synthetase In
           Complex With Atp
 gi|118138204|pdb|2I4O|C Chain C, Rhodopseudomonas Palustris Prolyl-Trna Synthetase In
           Complex With Atp
          Length = 458

 Score = 50.4 bits (119), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 88/202 (43%), Gaps = 14/202 (6%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTP 297
           +E+E   HR + R   L    ++ +G+  W   G ++ + +   +R  + +    E+  P
Sbjct: 36  KEAEIVSHRLMLRAGML---RQEAAGIYAWLPLGHRVLKKIEQIVREEQNRAGAIELLMP 92

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW++SG +D+Y   M  ++ AD   +  R     P N      +F   +KSY+ 
Sbjct: 93  TLQLADLWRESGRYDAYGPEM--LRIAD---RHKRELLYGPTNEEMITEIFRAYIKSYKS 147

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYK 416
           LP+ L      +R+E      G+MR R F   DA+ F   E    +   K+    +  + 
Sbjct: 148 LPLNLYHIQWKFRDEQRPRF-GVMRGREFLMKDAYSFDVDEAGARKSYNKMFVAYLRTFA 206

Query: 417 DFGFEKIMVKLSTRPEKRVGSD 438
             G + I ++  T P   +G D
Sbjct: 207 RMGLKAIPMRAETGP---IGGD 225


>gi|268596592|ref|ZP_06130759.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|268601604|ref|ZP_06135771.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|268550380|gb|EEZ45399.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|268585735|gb|EEZ50411.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
          Length = 580

 Score = 50.4 bits (119), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 64/139 (46%), Gaps = 9/139 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I  + SG+  W   G ++ + + + +R ++ +    E+  P V    LWQ+SG W+ Y  
Sbjct: 42  IKANASGLYTWMPMGLRVLRKVENVVREEMARAGSVELLMPVVQPAELWQESGRWEFYGK 101

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVA-VFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            +  +K   +     R F + P  C   +A +    + SY++LP       + +R+E   
Sbjct: 102 ELLRLKDRHE-----RDFCMGP-TCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEVRP 155

Query: 376 SLHGLMRVRGFTQDDAHVF 394
              G+MR R F   DA+ F
Sbjct: 156 RF-GVMRAREFVMKDAYSF 173


>gi|39935993|ref|NP_948269.1| prolyl-tRNA synthetase [Rhodopseudomonas palustris CGA009]
 gi|81829575|sp|Q6N5P6|SYP_RHOPA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|39649847|emb|CAE28369.1| proline-tRNA ligase [Rhodopseudomonas palustris CGA009]
          Length = 438

 Score = 50.4 bits (119), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 88/202 (43%), Gaps = 14/202 (6%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTP 297
           +E+E   HR + R   L    ++ +G+  W   G ++ + +   +R  + +    E+  P
Sbjct: 16  KEAEIVSHRLMLRAGML---RQEAAGIYAWLPLGHRVLKKIEQIVREEQNRAGAIELLMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW++SG +D+Y   M  ++ AD   +  R     P N      +F   +KSY+ 
Sbjct: 73  TLQLADLWRESGRYDAYGPEM--LRIAD---RHKRELLYGPTNEEMITEIFRAYIKSYKS 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYK 416
           LP+ L      +R+E      G+MR R F   DA+ F   E    +   K+    +  + 
Sbjct: 128 LPLNLYHIQWKFRDEQRPRF-GVMRGREFLMKDAYSFDVDEAGARKSYNKMFVAYLRTFA 186

Query: 417 DFGFEKIMVKLSTRPEKRVGSD 438
             G + I ++  T P   +G D
Sbjct: 187 RMGLKAIPMRAETGP---IGGD 205


>gi|229154159|ref|ZP_04282283.1| Prolyl-tRNA synthetase 2 [Bacillus cereus ATCC 4342]
 gi|228629295|gb|EEK85998.1| Prolyl-tRNA synthetase 2 [Bacillus cereus ATCC 4342]
          Length = 502

 Score = 50.4 bits (119), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 91/446 (20%), Positives = 171/446 (38%), Gaps = 62/446 (13%)

Query: 214 RPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGW 273
           R  L  + G      +E  Q +  +EE   + +  + ++ +L   +    G +     G+
Sbjct: 14  RAFLYFLEGGRLTMAKEQVQAITKMEEDFAQWYTDIVKKAELVDYS-SVKGCMILRPYGY 72

Query: 274 KIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDL 331
            +++ +   M  K+K   +E +  P  + + L Q +  H + +   +  V    D  K  
Sbjct: 73  ALWENMQKVMDEKLKATGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGDE-KLA 131

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
               ++P +       F+  ++SY +LP    ++ SV R E +      +R   F   + 
Sbjct: 132 ERLCIRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKT--TRPFLRTTEFLWQEG 189

Query: 392 H-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKG 450
           H +  T E+   E L I NL  S  +D+    ++    T  EK  G+ A +         
Sbjct: 190 HTIHETAEESQAETLNILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKATY--------- 240

Query: 451 VLDTIKNSSQD--RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
              TI++   D   + TG     G  +   F+    D  G+ WQ                
Sbjct: 241 ---TIESLMHDGKALQTGTSHNFGTNFSEAFDIKFLDRNGK-WQ---------------- 280

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTITSSA 564
                         +H+  +G   R IG +I     N    +P  ++P+Q ++  I    
Sbjct: 281 -------------YVHQTSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQVVIVPIAQHK 327

Query: 565 VEYAQEIANLLKSH---HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
            E     A  L+ H      ++ D  N+T  +K  E+ +K IPI +  G K+  +  + +
Sbjct: 328 -EGVLAKATELQGHIQKVARVKIDASNKTPGWKFNEYEMKGIPIRLEVGPKDIEKNQVVL 386

Query: 622 RRFGSTTTQKVS---LLDAIPILTKE 644
            R  +   + ++   L + IP L +E
Sbjct: 387 VRRDTKEKEFIAMDQLEERIPALLEE 412


>gi|239999200|ref|ZP_04719124.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|240080454|ref|ZP_04724997.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|240113176|ref|ZP_04727666.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|240115935|ref|ZP_04729997.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|240118232|ref|ZP_04732294.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
 gi|240123781|ref|ZP_04736737.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|240125970|ref|ZP_04738856.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
 gi|240128484|ref|ZP_04741145.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
 gi|254493969|ref|ZP_05107140.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
 gi|268603943|ref|ZP_06138110.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
 gi|268682406|ref|ZP_06149268.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|268684564|ref|ZP_06151426.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
 gi|226513009|gb|EEH62354.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
 gi|268588074|gb|EEZ52750.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
 gi|268622690|gb|EEZ55090.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|268624848|gb|EEZ57248.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
          Length = 570

 Score = 50.4 bits (119), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 64/139 (46%), Gaps = 9/139 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I  + SG+  W   G ++ + + + +R ++ +    E+  P V    LWQ+SG W+ Y  
Sbjct: 32  IKANASGLYTWMPMGLRVLRKVENVVREEMARAGSVELLMPVVQPAELWQESGRWEFYGK 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVA-VFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            +  +K   +     R F + P  C   +A +    + SY++LP       + +R+E   
Sbjct: 92  ELLRLKDRHE-----RDFCMGP-TCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEVRP 145

Query: 376 SLHGLMRVRGFTQDDAHVF 394
              G+MR R F   DA+ F
Sbjct: 146 RF-GVMRAREFVMKDAYSF 163


>gi|240013893|ref|ZP_04720806.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae DGI18]
 gi|240016334|ref|ZP_04722874.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae FA6140]
 gi|240121462|ref|ZP_04734424.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae PID24-1]
 gi|260440251|ref|ZP_05794067.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
          Length = 570

 Score = 50.4 bits (119), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 64/139 (46%), Gaps = 9/139 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I  + SG+  W   G ++ + + + +R ++ +    E+  P V    LWQ+SG W+ Y  
Sbjct: 32  IKANASGLYTWMPMGLRVLRKVENVVREEMARAGSVELLMPVVQPAELWQESGRWEFYGK 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVA-VFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            +  +K   +     R F + P  C   +A +    + SY++LP       + +R+E   
Sbjct: 92  ELLRLKDRHE-----RDFCMGP-TCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEVRP 145

Query: 376 SLHGLMRVRGFTQDDAHVF 394
              G+MR R F   DA+ F
Sbjct: 146 RF-GVMRAREFVMKDAYSF 163


>gi|114707388|ref|ZP_01440285.1| prolyl-tRNA synthetase [Fulvimarina pelagi HTCC2506]
 gi|114537269|gb|EAU40396.1| prolyl-tRNA synthetase [Fulvimarina pelagi HTCC2506]
          Length = 440

 Score = 50.4 bits (119), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 42/178 (23%), Positives = 75/178 (42%), Gaps = 12/178 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  +G+  +   G K+   + + +R  + +    E+  P +    LW++SG +D+Y  
Sbjct: 32  IRQQAAGLYTFLPLGLKVLNKVCAIIREEQNRAGANELLMPTIQSADLWRESGRYDAYGE 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  +     T +  R     P N      +F   ++SYR LP+ L      +R+E    
Sbjct: 92  EMLRI-----TDRHKRDLLYGPTNEEMVTDIFRSYVRSYRSLPLNLYHIQWKFRDEVRPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF---GFEKIMVKLSTRP 431
             G+MR R F   DA+ F    +        H + +S  + F   G + I ++  T P
Sbjct: 147 F-GVMRGREFLMKDAYSFDLDFESAQTAY--HRMFVSYLRTFDRCGLQAIPMRADTGP 201


>gi|315122709|ref|YP_004063198.1| prolyl-tRNA synthetase [Candidatus Liberibacter solanacearum
           CLso-ZC1]
 gi|313496111|gb|ADR52710.1| prolyl-tRNA synthetase [Candidatus Liberibacter solanacearum
           CLso-ZC1]
          Length = 453

 Score = 50.4 bits (119), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 63/140 (45%), Gaps = 7/140 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E++ P +    LW +SG ++SY   M  +   +D     ++    P N      +F   +
Sbjct: 68  EMSNPTLQSADLWIESGRYESYGKEMLRIVDRND-----KSMLYGPTNEEMMTDIFRSHV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLI 411
           KSYR+LP+ L +    +R+E      G MR R F   DA+ F  T E   +   K+    
Sbjct: 123 KSYRDLPLILYQMQLKFRDELRPRF-GTMRSREFLMKDAYSFDLTFEDSVHSYNKMFVSY 181

Query: 412 ISIYKDFGFEKIMVKLSTRP 431
           + I+   G + I ++  + P
Sbjct: 182 LRIFHRLGLKSIPMRAESGP 201


>gi|260893293|ref|YP_003239390.1| alanyl-tRNA synthetase [Ammonifex degensii KC4]
 gi|260865434|gb|ACX52540.1| alanyl-tRNA synthetase [Ammonifex degensii KC4]
          Length = 874

 Score = 50.4 bits (119), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 66/141 (46%), Gaps = 10/141 (7%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSD 117
           +E     + R      H+  H++ +A++ I  P V+ A   +  D   +DFD  Q  + +
Sbjct: 541 VEAAVDAERRRRTARNHTATHLLHQALKEILGPHVKQAGSLVAPDRLRFDFDHYQALTPE 600

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           E+ ++EK++ EI+    P +    S E+A        +A     L      E V + + G
Sbjct: 601 EIKRVEKRVNEIVLAALPVVTFTTSLEEA--------QAMGAVALFGEKYGETVRVVKIG 652

Query: 178 EW-FDLCRGPHVRSTGQVKKF 197
           ++  +LC G H+R+T +V  F
Sbjct: 653 DYSIELCAGTHLRNTAEVGVF 673


>gi|170755400|ref|YP_001782969.1| prolyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
 gi|259511587|sp|B1IFI2|SYP_CLOBK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|169120612|gb|ACA44448.1| prolyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
          Length = 478

 Score = 50.4 bits (119), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 81/396 (20%), Positives = 164/396 (41%), Gaps = 61/396 (15%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANM-FA 320
           G +     G+ I++ +  Y+  K+K+  +E ++ P  + ++L Q +  H + +   + + 
Sbjct: 39  GCMIIRPNGYAIWENIQKYVDTKLKEYGHENVSMPIFIPENLLQKEKDHVEGFAPEVAWV 98

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
               DD + +     ++P +       +   ++SY++LP    ++ SV R E +      
Sbjct: 99  THGGDDELAE--RLCVRPTSETLFCEHYAKIVQSYKDLPKLYNQWCSVVRWEKT--TRPF 154

Query: 381 MRVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDA 439
           +R   F   + H +  TKE+  +  LKI N+   + +D     +++   T  EK  G+D 
Sbjct: 155 LRTTEFLWQEGHTIHETKEEAESHSLKILNMYSRLCEDMLAMPVVMGKKTDKEKFAGADD 214

Query: 440 LWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-V 498
            +            TI++   D                          G+  Q GT   +
Sbjct: 215 TY------------TIESLMHD--------------------------GKALQAGTSHYL 236

Query: 499 DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQ 554
             N    F   + + + +  +P   H   +    R IG +I    +N    LP  ++P Q
Sbjct: 237 GQNFSKAFAIQFSDRNGKLDYP---HYTTWAVTTRLIGAIIMVHGDNSGLKLPPRIAPTQ 293

Query: 555 AIVTTITS---SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
           A++  +       +E A+E+   L +  + ++ D  ++   +K  E+ +K IP+ I  G 
Sbjct: 294 AVIIPVAQHKEGVLEKAEELKERL-AKVVRVKLDDSDKMPGWKYSEYEMKGIPLRIEIGP 352

Query: 612 KEASE-RSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           K+  + +++ +RR     T  +  LD I I  +E L
Sbjct: 353 KDIEKNQAVLVRRDNREKT--IVSLDEIEIKVQEML 386


>gi|192291648|ref|YP_001992253.1| prolyl-tRNA synthetase [Rhodopseudomonas palustris TIE-1]
 gi|226701325|sp|B3Q7L2|SYP_RHOPT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|192285397|gb|ACF01778.1| prolyl-tRNA synthetase [Rhodopseudomonas palustris TIE-1]
          Length = 438

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 88/202 (43%), Gaps = 14/202 (6%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTP 297
           +E+E   HR + R   L    ++ +G+  W   G ++ + +   +R  + +    E+  P
Sbjct: 16  KEAEIVSHRLMLRAGML---RQEAAGIYAWLPLGHRVLKKIEQIVREEQNRAGAIELLMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW++SG +D+Y   M  ++ AD   +  R     P N      +F   +KSY+ 
Sbjct: 73  TLQLADLWRESGRYDAYGPEM--LRIAD---RHKRELLYGPTNEEMITEIFRAYIKSYKS 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYK 416
           LP+ L      +R+E      G+MR R F   DA+ F   E    +   K+    +  + 
Sbjct: 128 LPLNLYHIQWKFRDEQRPRF-GVMRGREFLMKDAYSFDVDEAGARKSYNKMFVAYLRTFA 186

Query: 417 DFGFEKIMVKLSTRPEKRVGSD 438
             G + I ++  T P   +G D
Sbjct: 187 RMGLKAIPMRAETGP---IGGD 205


>gi|167630762|ref|YP_001681261.1| phosphoribulokinase/uridine kinase family protein [Heliobacterium
           modesticaldum Ice1]
 gi|167593502|gb|ABZ85250.1| phosphoribulokinase/uridine kinase family protein [Heliobacterium
           modesticaldum Ice1]
          Length = 560

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 52/236 (22%), Positives = 101/236 (42%), Gaps = 21/236 (8%)

Query: 39  VAVAINGKVCDLS-DPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIG 97
           VAV ++  + DL   P R+  +E++       L V   S A ++    + ++P  Q+ I 
Sbjct: 47  VAVRVDNVLEDLEYVPERDCLVEMVDMSTETGLRVYGQSLAFVLMRVARELFPGKQLEIQ 106

Query: 98  PIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAY 157
             +  GFY +   ++P + + + ++ ++M E++    P  ++ +S  +A  + E+     
Sbjct: 107 FSLNKGFYGELLGDEPLTPEMVDRLRERMWEVVRAAEPIKRKVVSRFEALHILEASGRQD 166

Query: 158 KVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPML 217
           + ++L    ++E V +Y  G++        V  TG +  +  +    G   R     P  
Sbjct: 167 QADVLR-FRSREPVNIYTCGDYLAYSDEILVPHTGMITTYQLVHYFTGFLLR----HPDQ 221

Query: 218 SRIYGTAWNTQQELTQYLYFLEESEK----------RD---HRKLAREMDLFHIAE 260
           S  +    N +Q+  Q  Y   ES+K          RD   H +  R  +L  IAE
Sbjct: 222 SDPFRIPPNVEQK--QLAYIFRESDKWTKIVKVGDVRDLNLHNEAGRTGELIRIAE 275


>gi|162382786|ref|YP_893300.2| prolyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|225862437|ref|YP_002747815.1| prolyl-tRNA synthetase [Bacillus cereus 03BB102]
 gi|229182781|ref|ZP_04310021.1| Prolyl-tRNA synthetase 2 [Bacillus cereus BGSC 6E1]
 gi|152074740|sp|A0R9A0|SYP2_BACAH RecName: Full=Prolyl-tRNA synthetase 2; AltName: Full=Proline--tRNA
           ligase 2; Short=ProRS 2
 gi|225785886|gb|ACO26103.1| proline--tRNA ligase [Bacillus cereus 03BB102]
 gi|228600754|gb|EEK58334.1| Prolyl-tRNA synthetase 2 [Bacillus cereus BGSC 6E1]
          Length = 476

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 83/400 (20%), Positives = 153/400 (38%), Gaps = 69/400 (17%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAV 321
           G +     G+ +++ +   M  K+K   +E +  P  + + L Q +  H + +   +  V
Sbjct: 37  GCMILRPYGYALWENMQKVMDEKLKATSHENVYMPMFIPESLLQKEKDHVEGFAPEVAWV 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
               D  K      ++P +       F+  ++SY +LP    ++ SV R E +      +
Sbjct: 97  THGGDE-KLAERLCVRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKT--TRPFL 153

Query: 382 RVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           R   F   + H +  T E+   E L I NL  S  +D+    ++    T  EK  G+ A 
Sbjct: 154 RTTEFLWQEGHTIHETAEESQAETLNILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKAT 213

Query: 441 WDDAENIMKGVLDTIKNSSQD--RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
           +            TI++   D   + TG     G  +   F+    D  G+ WQ      
Sbjct: 214 Y------------TIESLMHDGKALQTGTSHNFGTNFSEAFDIKFLDRNGK-WQ------ 254

Query: 499 DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQ 554
                                   +H+  +G   R IG +I     N    +P  ++P+Q
Sbjct: 255 -----------------------YVHQTSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQ 291

Query: 555 AIVTTIT-------SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIII 607
            ++  I        + A E    I  + +     ++ D  N+T  +K  E+ +K IPI +
Sbjct: 292 VVIVPIAQHKEGVLAKATELQGHIQKVAR-----VKIDASNKTPGWKFNEYEMKGIPIRL 346

Query: 608 ICGDKEASERSIGIRRFGSTTTQKVS---LLDAIPILTKE 644
             G K+  +  + + R  +   + +S   L + IP L +E
Sbjct: 347 EVGPKDIEKNQVVLVRRDTKEKEFISMDQLEERIPALLEE 386


>gi|88607069|ref|YP_505231.1| prolyl-tRNA synthetase [Anaplasma phagocytophilum HZ]
 gi|114152168|sp|Q2GK70|SYP_ANAPZ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|88598132|gb|ABD43602.1| prolyl-tRNA synthetase [Anaplasma phagocytophilum HZ]
          Length = 426

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 91/423 (21%), Positives = 168/423 (39%), Gaps = 62/423 (14%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRA 316
           +++  SG+      G  + + + + +R +I    + EI  P +    LW++S  +DSY  
Sbjct: 32  VSQTASGIYTLLPLGLMVLRKVENIIREEINAVGFSEILMPTMQPADLWKESQRYDSYGQ 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            +  +       +  R   L P +      +    LKSYR+LPV L +    +R+E    
Sbjct: 92  ELIRIHD-----RGGREMVLGPTHEEVVTDLVRSSLKSYRDLPVNLYQIQWKFRDELRPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
            +G++R R F   DA+ F T    F + +K ++ +   Y+   F+++ ++          
Sbjct: 147 -NGILRSREFLMMDAYSFDTD---FEKAMKTYDAVFRAYRK-AFKRMNLQ---------- 191

Query: 437 SDALWDDAENIMKG------VLDTIKNSSQDRINTGVLLGEGAFYG---PKFEYILKDAI 487
           + AL  D   I         VL     S+       + L E   YG    K  Y   D +
Sbjct: 192 TIALKADMGAIGGSVSHEFHVLTPTGESTVYYDERALELSEMNDYGIEELKEVYAATDDM 251

Query: 488 GRDWQCGTIQVD------------FNLPSRF----NAFYVNSHSEKCHPVMIHRAVFG-S 530
             +  CG    D            F L  R+    N  + N+       V +    +G  
Sbjct: 252 HDEKSCGIAPEDLKTARGIEVGHIFYLDDRYSRTMNVKFCNTDGHSGTHVKM--GCYGIG 309

Query: 531 IERFIGIMIENFKGNL----PLWLSPIQAIVTTITSSAVE---YAQEIANLLKSHHLSIE 583
           I R IG +IE F  +     PL ++P +  +  + S   E    ++ I ++L +  L   
Sbjct: 310 ISRLIGALIEVFHDDAGIKWPLSVAPFKVGIVNLFSKNEECKRVSERIHSVLPNDSL--- 366

Query: 584 TDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            D R++T   K+    +  +P  +I G+    +   G+    +  T  + LL    ++++
Sbjct: 367 YDDRDDTPGVKLSRMDLIGLPWQVIVGNSFIKD---GVLELKNRATGDIELLSVDDVVSR 423

Query: 644 ESL 646
            S+
Sbjct: 424 ISV 426


>gi|328543706|ref|YP_004303815.1| Prolyl-tRNA synthetase [polymorphum gilvum SL003B-26A1]
 gi|326413449|gb|ADZ70512.1| Prolyl-tRNA synthetase [Polymorphum gilvum SL003B-26A1]
          Length = 442

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/202 (22%), Positives = 87/202 (43%), Gaps = 14/202 (6%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTP 297
           +E+E   HR + R      I +  +G+  W   G+++ + +   +   + +    ++  P
Sbjct: 16  KEAEIVSHRLMLRAG---MIRQQSAGIYSWLPLGFRVLRKIEKIVEEEQARAGAVQLLMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW++SG +D+Y   M  +     T +  R     P N      +F   ++SY++
Sbjct: 73  TIQPADLWRESGRYDAYGKEMLRI-----TDRHEREMLYGPTNEEMITEIFRSYVRSYKD 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYK 416
           LP+ L      +R+E      G+MR R F   DA+ F   KE   +   ++    +  + 
Sbjct: 128 LPLNLYHIQWKFRDEVRPRF-GIMRGREFLMKDAYSFDIDKEAARHAYNRMFVAYLRTFA 186

Query: 417 DFGFEKIMVKLSTRPEKRVGSD 438
             G + I ++  T P   +G D
Sbjct: 187 RMGLKAIPMRADTGP---IGGD 205


>gi|296139421|ref|YP_003646664.1| prolyl-tRNA synthetase [Tsukamurella paurometabola DSM 20162]
 gi|296027555|gb|ADG78325.1| prolyl-tRNA synthetase [Tsukamurella paurometabola DSM 20162]
          Length = 585

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/196 (23%), Positives = 86/196 (43%), Gaps = 19/196 (9%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +  IA    GV  W   G ++ + +   +R ++     +EI  P 
Sbjct: 19  DAEVPSHKLLVRAGYVRRIA---PGVYSWLPLGLRVLRNVEHVVREEMNAIGGQEILLPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L +  ++ +  W  Y  ++F  +  D    D+       M  P H  +F   +K    S
Sbjct: 76  LLPREPYETTNRWTEYGDSLF--RLQDRKGADM-------MLGPTHEEIFALTVKGEYNS 126

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS- 413
           Y++LPV L +  + YR+E      G++R R F   D++ F T ++  +E    H      
Sbjct: 127 YKDLPVILYQIQNKYRDEER-PRAGILRGREFVMKDSYSFDTSDEGLSEAYAKHRAAYQR 185

Query: 414 IYKDFGFEKIMVKLST 429
           I+     E ++V  ++
Sbjct: 186 IFARLAIEHVIVSATS 201


>gi|292670888|ref|ZP_06604314.1| phosphoribulokinase [Selenomonas noxia ATCC 43541]
 gi|292647509|gb|EFF65481.1| phosphoribulokinase [Selenomonas noxia ATCC 43541]
          Length = 540

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 80/162 (49%), Gaps = 5/162 (3%)

Query: 39  VAVAINGKVCDLSDPVREGSIEIITPEDPRSL--AVIRHSCAHIMAEAVQSIWPEVQVAI 96
           VA  ING+V D+   V + + EI   E   SL  ++ R S   ++  AV  I  E +V  
Sbjct: 21  VAAKINGEVRDIQ-TVYDDTDEIQFIELDTSLGWSIYRRSVLFLLIIAVNKIEHEAEVIA 79

Query: 97  GPIIEDGFYYDFDKE-QPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKE 155
              +  G Y +     +   ++ + ++ K+M+++IA + P +K  +  E+A +LF+  + 
Sbjct: 80  KFTVNKGLYCEIKTSGKDIDANFIDKVNKQMRQMIADNIPIIKYTIPREEAIKLFQKSQR 139

Query: 156 AYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
             KV +L S+ +   ++LY    + D   GP +  T  + +F
Sbjct: 140 YGKVRLLSSL-STPIISLYICESYSDYLYGPMLPETKHLNRF 180


>gi|283856263|ref|YP_162195.2| prolyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4]
 gi|292495061|sp|P75000|SYP_ZYMMO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|283775258|gb|AAV89084.2| prolyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 443

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 83/418 (19%), Positives = 159/418 (38%), Gaps = 45/418 (10%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  +G+  W   G ++ + +   +R  + +    E+  P +    LW++SG +D+Y  
Sbjct: 32  IRQTAAGIYAWLPLGLRVLRRIEKIIREEQARAGALELLMPTLQTADLWRESGRYDAYGP 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  +K   +     R     P N     A+    L+SYR+LP         +R+E    
Sbjct: 92  EMLRIKDRHN-----RELLYGPTNEEMITALIRDNLQSYRDLPRIFYHIQWKFRDEVRPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
             G+MR R F   DA+ F   E        ++    ++ +   G   I ++  T P   +
Sbjct: 147 F-GVMRGREFLMKDAYSFDIDETAGRHNYNRMFVAYLNSFSRLGLRAIPMQADTGP---I 202

Query: 436 GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK-FEYILKDAIG------ 488
           G D   +       G  D   +S+ ++    +   E  F  PK  + I+ D I       
Sbjct: 203 GGDLSHEFIVLAPNGESDVFYHSNWEQPTRHI---EADFDDPKALQSIVNDHISDYAATD 259

Query: 489 ------RDWQCG-TIQVDFNLPSRFNAFYVNSHSEKC---------HPVMIHRAVFG-SI 531
                 R+ Q G  ++    +      F+   +S+            P+ I    +G  I
Sbjct: 260 EKRDPLREAQAGDKLRQSRGIEVGHIFFFGTKYSKPMGFTLPGPDGKPIPIQMGSYGIGI 319

Query: 532 ERFIGIMIE-NFKGNLPLWLSPIQAIVTTITSSAVE------YAQEIANLLKSHHLSIET 584
            R +G +IE +   N  +W   +      + +  ++       A  +   L++  +    
Sbjct: 320 SRLLGAIIEASHDDNGIIWPEAVAPYHVGLINLRIDDENCRAIADSLYQRLEAAGIDTLY 379

Query: 585 DFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           D RNE    K     +  +P  ++ G K A +  + ++   +   Q +S+ +A  +LT
Sbjct: 380 DDRNERGGAKFATMDLIGLPWQVVIGPKGAEKGVVELKNRANGEKQTISVENAFNLLT 437


>gi|294625222|ref|ZP_06703863.1| prolyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292600496|gb|EFF44592.1| prolyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
          Length = 621

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/202 (21%), Positives = 84/202 (41%), Gaps = 14/202 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E   HR + R   +  +A   SG+  W   G ++ + + + +R ++ +    E+  P 
Sbjct: 74  DAELVSHRLMLRAGMIRKLA---SGLYTWSPLGLRVLRKVEAIVREEMNRAGAVEVLFPT 130

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +  + LW  +G W+ +   +  +K   +     + F   P             + SY++L
Sbjct: 131 IQPRELWDATGRWEKFGGQLLKIKDRKE-----QEFCYSPTAEEAAAEFARQEINSYKQL 185

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKD 417
           P+   +  + +R+E      G+MR R F   DA+ F  T E M  E   +      I+  
Sbjct: 186 PLNFYQIQTKFRDEIRPRF-GVMRAREFLMKDAYSFHLTDEDMAREYDNMRAAYTRIFTR 244

Query: 418 FGFEKIMVKLSTRPEKRVGSDA 439
            G +   V+  +     +G DA
Sbjct: 245 LGLDFRAVQADS---GAIGGDA 263


>gi|283850295|ref|ZP_06367584.1| prolyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
 gi|283574321|gb|EFC22292.1| prolyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
          Length = 575

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 47/102 (46%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           EI  P V    LW++SG WD Y   +       D     R   L P +      +  H +
Sbjct: 68  EILMPAVQPADLWKESGRWDFYGRELLRFVDRHD-----RESCLGPTHEEVVTDLVRHEI 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           +SYR+LPV L +  + +R+E      GLMR R F   DA+ F
Sbjct: 123 RSYRQLPVNLYQVQTKFRDEIRPRF-GLMRGREFVMKDAYSF 163


>gi|254418115|ref|ZP_05031839.1| prolyl-tRNA synthetase [Brevundimonas sp. BAL3]
 gi|196184292|gb|EDX79268.1| prolyl-tRNA synthetase [Brevundimonas sp. BAL3]
          Length = 438

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/183 (22%), Positives = 79/183 (43%), Gaps = 11/183 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I ++ +G+  W   G ++ + +   +R  + +    E+  P +    LW++SG +D+Y  
Sbjct: 32  IKQEAAGIYAWLPLGLRVLRKIEQIVREEQQRAGAVELLMPTLQLADLWRESGRYDAYGP 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  +     T +  R     P N      +F   +KSY+ LP+ L      +R+E    
Sbjct: 92  EMLRI-----TDRHERELLYGPTNEEMITDIFRAYVKSYKSLPLNLFHIQWKFRDERRPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
             G+MR R F   DA+ F   E    +   ++    ++ +   G + + ++  T P   +
Sbjct: 147 F-GVMRGREFLMKDAYSFDVDEASARKAYNRMFVAYLNTFARMGLKAVPMRADTGP---I 202

Query: 436 GSD 438
           G D
Sbjct: 203 GGD 205


>gi|171463016|ref|YP_001797129.1| prolyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           necessarius STIR1]
 gi|226701317|sp|B1XT38|SYP_POLNS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|171192554|gb|ACB43515.1| prolyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           necessarius STIR1]
          Length = 580

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/161 (22%), Positives = 75/161 (46%), Gaps = 8/161 (4%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           +GV  +   G K+ + + + +R ++ +    E+  P +    LWQ++G W+     +  +
Sbjct: 37  AGVYNYLPLGLKVIRKVENIIREEMNRAGAIELLMPMIQPAELWQETGRWEKMGPELLRI 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           K   D     R F ++P +      +  + +KSY++LPV   +  + +R+E      G+M
Sbjct: 97  KDRHD-----RDFLIQPTSEEVVTDLARNEIKSYKQLPVNFYQIQTKFRDERRPRF-GIM 150

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLKIH-NLIISIYKDFGFE 421
           R R F+  DA+ F    +   +  +I  +    I+K  G +
Sbjct: 151 RGREFSMKDAYSFDRDTEGLKKSYQIMFDAYTRIFKRMGLQ 191


>gi|59800999|ref|YP_207711.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090]
 gi|81311217|sp|Q5F938|SYP_NEIG1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|59717894|gb|AAW89299.1| putative prolyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090]
          Length = 570

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 64/139 (46%), Gaps = 9/139 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I  + SG+  W   G ++ + + + +R ++ +    E+  P V    LWQ+SG W+ Y  
Sbjct: 32  IKANASGLYTWMPMGLRVLRKVENVVREEMARAGSVELLMPVVQPAELWQESGRWEFYGK 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVA-VFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            +  +K   +     R F + P  C   +A +    + SY++LP       + +R+E   
Sbjct: 92  ELLRLKDRHE-----RDFCMGP-TCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEVRP 145

Query: 376 SLHGLMRVRGFTQDDAHVF 394
              G+MR R F   DA+ F
Sbjct: 146 RF-GVMRAREFVMKDAYSF 163


>gi|153938581|ref|YP_001392690.1| prolyl-tRNA synthetase [Clostridium botulinum F str. Langeland]
 gi|171769234|sp|A7GIT0|SYP_CLOBL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|152934477|gb|ABS39975.1| proline--tRNA ligase [Clostridium botulinum F str. Langeland]
 gi|295320672|gb|ADG01050.1| proline--tRNA ligase [Clostridium botulinum F str. 230613]
 gi|322807661|emb|CBZ05236.1| prolyl-tRNA synthetase [Clostridium botulinum H04402 065]
          Length = 478

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 81/396 (20%), Positives = 164/396 (41%), Gaps = 61/396 (15%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANM-FA 320
           G +     G+ I++ +  Y+  K+K+  +E ++ P  + ++L Q +  H + +   + + 
Sbjct: 39  GCMIIRPNGYAIWENIQKYVDTKLKEYGHENVSMPIFIPENLLQKEKDHVEGFAPEVAWV 98

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
               DD + +     ++P +       +   ++SY++LP    ++ SV R E +      
Sbjct: 99  THGGDDELAE--RLCVRPTSETLFCEHYAKIVQSYKDLPKLYNQWCSVVRWEKT--TRPF 154

Query: 381 MRVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDA 439
           +R   F   + H +  TKE+  +  LKI N+   + +D     +++   T  EK  G+D 
Sbjct: 155 LRTTEFLWQEGHTIHETKEEAESHSLKILNMYSRLCEDMLAMPVVMGKKTDKEKFAGADD 214

Query: 440 LWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-V 498
            +            TI++   D                          G+  Q GT   +
Sbjct: 215 TY------------TIESLMHD--------------------------GKALQAGTSHYL 236

Query: 499 DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQ 554
             N    F   + + + +  +P   H   +    R IG +I    +N    LP  ++P Q
Sbjct: 237 GQNFSKAFAIQFSDRNGKLDYP---HYTTWAVTTRLIGAIIMVHGDNSGLKLPPRIAPTQ 293

Query: 555 AIVTTITS---SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
           A++  +       +E A+E+   L +  + ++ D  ++   +K  E+ +K IP+ I  G 
Sbjct: 294 AVIIPVAQHKEGVLEKAEELKERL-AKVVRVKLDDSDKMPGWKYSEYEMKGIPLRIEIGP 352

Query: 612 KEASE-RSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           K+  + +++ +RR     T  +  LD I I  +E L
Sbjct: 353 KDIEKNQAVLVRRDNREKT--IVSLDEIEIKVQEML 386


>gi|90423082|ref|YP_531452.1| alanyl-tRNA synthetase [Rhodopseudomonas palustris BisB18]
 gi|122476792|sp|Q218Q3|SYA_RHOPB RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|90105096|gb|ABD87133.1| alanyl-tRNA synthetase [Rhodopseudomonas palustris BisB18]
          Length = 890

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 63/133 (47%), Gaps = 7/133 (5%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFSSDELAQIEKKM 126
           RS     HS  H++ EA++ +  +     G ++ ED   +DF  ++P S+DEL ++E   
Sbjct: 557 RSSIRANHSATHLLHEALRQVLGDHIAQKGSLVAEDRLRFDFVHQKPISADELRRVEDIA 616

Query: 127 QEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
            E++  +     + ++ + ARE     LF  +K   +V ++    +         G   +
Sbjct: 617 NEVVLENDEVTTRLMAVDDAREAGARALF-GEKYGDEVRVVTMGKSARQHGSNALGWSVE 675

Query: 182 LCRGPHVRSTGQV 194
           LC G HVR TG +
Sbjct: 676 LCGGTHVRRTGDI 688


>gi|157165397|ref|YP_001466693.1| prolyl-tRNA synthetase [Campylobacter concisus 13826]
 gi|171855061|sp|A7ZD35|SYP_CAMC1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|112800481|gb|EAT97825.1| prolyl-tRNA synthetase [Campylobacter concisus 13826]
          Length = 566

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E++   V    LW+QSG ++ +   +   K   D       F + P N    VA+    +
Sbjct: 68  EVSFSVVTSGELWKQSGRYNVFGKELLRFKDRKDN-----DFVISPTNEEAAVALVRGKV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
            SY++LP+ L +  + +R+E      GL+R R FT  D + F
Sbjct: 123 TSYKQLPLNLYQINTKFRDEARPRF-GLLRGREFTMKDGYSF 163


>gi|238897616|ref|YP_002923295.1| proline tRNA synthetase [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
 gi|259511602|sp|C4K3K4|SYP_HAMD5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|229465373|gb|ACQ67147.1| proline tRNA synthetase [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
          Length = 579

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 7/144 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ K    E+  P V    LWQ+S  W+ Y   +  
Sbjct: 36  ASGLYTWLPTGTRVLKKIENIVREEMNKAGAIEVVMPIVQPADLWQESERWEHYGPEL-- 93

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           ++ AD   +  R F L P +      +  + + SY++LP+   +  + +R+E      G+
Sbjct: 94  LRFAD---RSERPFVLGPTHEEVITDLVRNEISSYKQLPLNFFQIQTKFRDEIRPRF-GI 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNEC 404
           MR R F   DA+ F    +   E 
Sbjct: 150 MRAREFLMKDAYSFHNTLESLQET 173


>gi|229107523|ref|ZP_04237275.1| Prolyl-tRNA synthetase 2 [Bacillus cereus Rock3-28]
 gi|228675915|gb|EEL31008.1| Prolyl-tRNA synthetase 2 [Bacillus cereus Rock3-28]
          Length = 476

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 82/396 (20%), Positives = 155/396 (39%), Gaps = 61/396 (15%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHLWQ-QSGHWDSYRANMFAV 321
           G +     G+ +++ +   M  K+K+  +E +  P  + + L Q +  H + +   +  V
Sbjct: 37  GCMILRPYGYALWENMQKVMDEKLKETGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWV 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
               D  K      ++P +       F+  ++SY +LP    ++ SV R E +      +
Sbjct: 97  THGGDE-KLAERLCVRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKT--TRPFL 153

Query: 382 RVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           R   F   + H +  T E+   E L I NL  S  +++    ++    T  EK  G+ A 
Sbjct: 154 RTTEFLWQEGHTIHETGEESQAETLNILNLYASFCEEYLAIPVIKGQKTEKEKFAGAKAT 213

Query: 441 WDDAENIMKGVLDTIKNSSQD--RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
           +            TI++   D   + TG     G  +   F+    D  G+ WQ      
Sbjct: 214 Y------------TIESLMHDGKALQTGTSHNFGTNFSEAFDIKFLDRNGK-WQ------ 254

Query: 499 DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQ 554
                                   +H+  +G   R IG +I     N    +P  ++P+Q
Sbjct: 255 -----------------------YVHQTSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPLQ 291

Query: 555 AIVTTITS---SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
            ++  I       +E A E+   ++     ++ D  N+T  +K  E+ +K IPI +  G 
Sbjct: 292 VVIVPIAQHKEGVLEKATELQGRIQKV-ARVKIDASNKTPGWKFNEYEMKGIPIRLEVGP 350

Query: 612 KEASERSIGIRRFGSTTTQKVS---LLDAIPILTKE 644
           K+  +  + + R  +   + +S   L + IP L +E
Sbjct: 351 KDIEKNQVVLVRRDTKEKEFISMDQLEERIPSLLEE 386


>gi|332982910|ref|YP_004464351.1| uridine kinase [Mahella australiensis 50-1 BON]
 gi|332700588|gb|AEE97529.1| uridine kinase [Mahella australiensis 50-1 BON]
          Length = 495

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/122 (26%), Positives = 60/122 (49%), Gaps = 1/122 (0%)

Query: 76  SCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSP 135
           + + I+A+AV  I P  ++ +   + +G Y +    +  S  E+AQ++K M E++  + P
Sbjct: 15  TLSLILAKAVADIMPGCRLVVEHSLGNGQYCEIHGVKHISPSEIAQLKKHMTELVEANQP 74

Query: 136 FLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVK 195
            +++ +  ++A  LFE+  +     IL      + V++Y  G   D    P   STGQ  
Sbjct: 75  IIQEIIPRQQAIALFENIGKQETAHILRYRQV-DKVSVYHLGNLIDYFYEPLFTSTGQAN 133

Query: 196 KF 197
            F
Sbjct: 134 VF 135


>gi|293611014|ref|ZP_06693313.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292826666|gb|EFF85032.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 571

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/147 (23%), Positives = 65/147 (44%), Gaps = 7/147 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E+  P      LW++SG ++ Y   +  
Sbjct: 36  ASGLYTWLPMGTRVLKKVDAIVREEMNRSGAMEVFMPVTQPASLWEESGRYEQYGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            K      +    F L P +      +  + LKSY++LPV   +  + +R+E      G+
Sbjct: 96  FKD-----RHTNPFVLGPTHEEVITDMARNELKSYKQLPVNFYQIQTKFRDEIRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKI 407
           MR R F   DA+ F   ++   E   +
Sbjct: 150 MRSREFIMKDAYSFHATQESLQETYDV 176


>gi|294664482|ref|ZP_06729831.1| prolyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|292605740|gb|EFF49042.1| prolyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
          Length = 621

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/202 (21%), Positives = 84/202 (41%), Gaps = 14/202 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E   HR + R   +  +A   SG+  W   G ++ + + + +R ++ +    E+  P 
Sbjct: 74  DAELVSHRLMLRAGMIRKLA---SGLYTWSPLGLRVLRKVEAIVREEMNRAGAVEVLFPT 130

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +  + LW  +G W+ +   +  +K   +     + F   P             + SY++L
Sbjct: 131 IQPRELWDATGRWEKFGGQLLKIKDRKE-----QEFCYSPTAEEAAAEFARQEINSYKQL 185

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKD 417
           P+   +  + +R+E      G+MR R F   DA+ F  T E M  E   +      I+  
Sbjct: 186 PLNFYQIQTKFRDEIRPRF-GVMRAREFLMKDAYSFHLTDEDMAREYDNMRAAYTRIFTR 244

Query: 418 FGFEKIMVKLSTRPEKRVGSDA 439
            G +   V+  +     +G DA
Sbjct: 245 LGLDFRAVQADS---GAIGGDA 263


>gi|331002268|ref|ZP_08325787.1| hypothetical protein HMPREF0491_00649 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330411362|gb|EGG90778.1| hypothetical protein HMPREF0491_00649 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 544

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/171 (25%), Positives = 82/171 (47%), Gaps = 22/171 (12%)

Query: 36  KKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           K+A+ V +NGK+ +L   +++  ++E IT  D         S   I+ ++++ I+ +   
Sbjct: 32  KRALLVKVNGKLQELHKTLKQDVTLEFITLSDAIGRMTYERSAVLILLKSIKDIYGD--- 88

Query: 95  AIGPIIE----DGFYY----DFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKA 146
           +I P++E    +G +     DFD E+         I+K+M+E++  +    K  +  + A
Sbjct: 89  SIRPVVEFSTGNGLFIRMNADFDIER---------IDKRMRELVDENIRIEKMNVHTDAA 139

Query: 147 RELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
            ++F      Y+ E L S      V +Y+  E+ D   G  V STG + KF
Sbjct: 140 IQMFHDAG-MYEKEKLFSFRRVSRVNIYKLEEFIDYNYGYMVYSTGYIDKF 189


>gi|325123334|gb|ADY82857.1| prolyl-tRNA synthetase [Acinetobacter calcoaceticus PHEA-2]
          Length = 571

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/147 (23%), Positives = 65/147 (44%), Gaps = 7/147 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E+  P      LW++SG ++ Y   +  
Sbjct: 36  ASGLYTWLPMGTRVLKKVDAIVREEMNRSGAMEVFMPVTQPASLWEESGRYEQYGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            K      +    F L P +      +  + LKSY++LPV   +  + +R+E      G+
Sbjct: 96  FKD-----RHTNPFVLGPTHEEVITDMARNELKSYKQLPVNFYQIQTKFRDEIRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKI 407
           MR R F   DA+ F   ++   E   +
Sbjct: 150 MRSREFIMKDAYSFHATQESLQETYDV 176


>gi|167752565|ref|ZP_02424692.1| hypothetical protein ALIPUT_00818 [Alistipes putredinis DSM 17216]
 gi|167659634|gb|EDS03764.1| hypothetical protein ALIPUT_00818 [Alistipes putredinis DSM 17216]
          Length = 494

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 72/312 (23%), Positives = 123/312 (39%), Gaps = 65/312 (20%)

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNL 410
           ++SYR+LP+   ++ +V R E    L   +R   F   + H    TKE+   E  +    
Sbjct: 139 IQSYRDLPILCNQWANVVRWEMRTRL--FLRTAEFLWQEGHTAHATKEEAIEEATR---- 192

Query: 411 IISIYKDFGFEKIMVKL---STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGV 467
           +I +Y+ F  E + V +      P +R               G +DT+            
Sbjct: 193 MIHVYQKFVEEWMGVPVIVGHKSPNERFA-------------GAVDTL------------ 227

Query: 468 LLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
                       E +++D  G+  Q GT   +  N    F+  Y+N   +  +   +   
Sbjct: 228 ----------TIEALMQD--GKALQSGTSHFLGQNFAKAFDVQYINKEGKLEY---VWAT 272

Query: 527 VFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTITSSA------VEYAQEIANLLK 576
            +G   R +G +I     N    LP  L+PIQ ++  I          VE  + IA  LK
Sbjct: 273 SWGVSTRLMGALIMAHSDNNGLVLPPKLAPIQVVLIPIYKGEEQMRQIVERLRTIAEELK 332

Query: 577 SHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV--- 632
           S  LS++ D R N    +K  E+ +K +P+ +  G ++    +I + R  +   + V   
Sbjct: 333 SKGLSVKIDDRDNVRSGFKFAEYELKGVPVRLALGPRDLENGTIELVRRDTLEKETVPQE 392

Query: 633 SLLDAIPILTKE 644
            L D +  L  E
Sbjct: 393 GLTDRVAALMDE 404


>gi|299537091|ref|ZP_07050394.1| prolyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
 gi|298727332|gb|EFI67904.1| prolyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
          Length = 478

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 73/397 (18%), Positives = 159/397 (40%), Gaps = 63/397 (15%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHLWQ-QSGHWDSYRANM-FA 320
           G I +   G++I++ +   M R+ K+  +     P ++ +  +Q +  H + +   + + 
Sbjct: 29  GCIAFKPDGYEIWEHIQEEMDRRFKETGHRNAYFPMLIPESFFQKEKDHIEGFSPELPWV 88

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            + A + +++    AL+P +      ++++ +KSYR+LPV + ++ +V+R E        
Sbjct: 89  TEAAGEQLEE--RLALRPTSETMIGHLYSNWIKSYRDLPVLINQWANVFRWE--KKTLPF 144

Query: 381 MRVRGFTQDDAHVFCTKE-QMFNECLKIHNLIISIYKDFGFEKIMVKL---STRPEKRVG 436
           +R   F   + H     E     E +++    + IYK+   + + + +      P +R  
Sbjct: 145 IRTSEFLWQEGHTAHVDEADARQETMQM----LDIYKEVVEQVLAIPVYDGQKTPSERFA 200

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
                        G +DT    +  +    V  G   + G KF                 
Sbjct: 201 -------------GAVDTYSIEAMMKNGKAVQAGTSHYLGTKF----------------- 230

Query: 497 QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG--IMIENFKGNL--PLWLSP 552
                    FN  Y+N  ++  +   +H   +G+  R IG  IM+   +  L  P  ++P
Sbjct: 231 ------AEAFNIKYLNKANQHEY---VHTTSWGTSTRLIGSVIMVHGDEQGLVLPPRIAP 281

Query: 553 IQAIVTTI-----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIII 607
            Q ++  +         +E+  EI   LK+  + +  D  +++  YK  E  +K +P+ +
Sbjct: 282 TQVVLIPVGPWKKNPQIMEHLDEIFAALKAKGIRVRLDDSDQSPGYKFNEWELKGVPVRV 341

Query: 608 ICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
             G ++   +   ++       + V L   I  + +E
Sbjct: 342 ELGPRDLENKQALLKARDEEEKRTVELASIITAIEEE 378


>gi|325268408|ref|ZP_08135040.1| phosphoribulokinase [Prevotella multiformis DSM 16608]
 gi|324989262|gb|EGC21213.1| phosphoribulokinase [Prevotella multiformis DSM 16608]
          Length = 519

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/160 (24%), Positives = 70/160 (43%), Gaps = 2/160 (1%)

Query: 39  VAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIG 97
           V+  +N KV  L   V     +E +    P  +     S   ++ +AV  ++P   V I 
Sbjct: 6   VSAKVNNKVEGLHYRVYHNKDVEYLDLHAPSGIRTYTRSLFLVLCKAVHDLYPGSSVVID 65

Query: 98  PIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAY 157
             + +G+Y +       + D++ +I  +MQEII    P  +   + E+A E+F    +  
Sbjct: 66  IPVSNGYYCNLKLGHAVTPDDVRRIRTRMQEIIDARLPIQRFETTTEEAVEMFNRLGDGQ 125

Query: 158 KVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
           K ++L S     +V  Y   ++ D   G  +  TGQ+  F
Sbjct: 126 KAKLLRSSGTLYSV-YYVLDDYKDYYYGSMLTDTGQIHLF 164


>gi|254502934|ref|ZP_05115085.1| prolyl-tRNA synthetase [Labrenzia alexandrii DFL-11]
 gi|222439005|gb|EEE45684.1| prolyl-tRNA synthetase [Labrenzia alexandrii DFL-11]
          Length = 442

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/202 (22%), Positives = 85/202 (42%), Gaps = 14/202 (6%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTP 297
           +E+E   HR + R      I +  +G+  W   G K+ + +   +   + +    ++  P
Sbjct: 16  KEAEIVSHRLMLRAG---MIRQQSAGIYSWLPLGLKVLRKIERIVEEEQARAGAVQLLMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW++SG +D+Y   M  +     T +  R     P N      +F   ++SY++
Sbjct: 73  TIQPADLWRESGRYDAYGKEMLRI-----TDRHEREMLFGPTNEEMITDIFRSYVRSYKD 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYK 416
           LP+ L      +R+E      G+MR R F   DA+ F   ++       ++    +  + 
Sbjct: 128 LPLNLYHIQWKFRDEVRPRF-GIMRGREFLMKDAYSFDLDQETARHAYNRMFVAYLRTFD 186

Query: 417 DFGFEKIMVKLSTRPEKRVGSD 438
             G + I +K  T P   +G D
Sbjct: 187 RMGLKAIPMKADTGP---IGGD 205


>gi|94498868|ref|ZP_01305406.1| prolyl-tRNA synthetase [Oceanobacter sp. RED65]
 gi|94428500|gb|EAT13472.1| prolyl-tRNA synthetase [Oceanobacter sp. RED65]
          Length = 584

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/161 (22%), Positives = 68/161 (42%), Gaps = 8/161 (4%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG+  W   G K  + +   +R ++     +E+  P V    LW++SG W  Y   +  +
Sbjct: 37  SGLYTWLPLGLKTLRKVEKVVREEMDAAGAQEVLMPAVQPAELWEESGRWFEYGGELLRL 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           K   +     R F + P +      +  + L SY++LP    +  + +R+E      G+M
Sbjct: 97  KDRHN-----RDFCVGPTHEEVITDLARNELNSYKQLPSNFYQIQTKFRDETRPRF-GVM 150

Query: 382 RVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFE 421
           R R F   DA+ F        +   ++H    +I+   G +
Sbjct: 151 RSREFIMKDAYSFHIDGDSLQQTYDRMHQAYTNIFTRLGLD 191


>gi|104774217|ref|YP_619197.1| prolyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC 11842]
 gi|122983932|sp|Q1G9P3|SYP_LACDA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|103423298|emb|CAI98139.1| Prolyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC 11842]
          Length = 565

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/167 (23%), Positives = 77/167 (46%), Gaps = 8/167 (4%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
           +I +  +GV  +   G+K+ +     +  ++ +    E+  P +L   +W++SG    Y 
Sbjct: 31  YIRQVTAGVYSYLPLGYKVLRKTEKIIEEEMANAGVVEMIMPHMLPASMWEESGRLPKYG 90

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
             MF +K      +  R   L P +      V    LKSY+++P++L +  + +R+E + 
Sbjct: 91  PEMFRLKD-----RHGREMLLGPTHEETFTDVVAKSLKSYKQMPLQLYQIQTKFRDE-NR 144

Query: 376 SLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFE 421
              GL+R R F   D + F  ++EQ+  +        + I+K  G E
Sbjct: 145 PRFGLLRGREFVMLDGYSFAASQEQLDKQFDDEKAAYLKIFKRTGVE 191


>gi|258652410|ref|YP_003201566.1| prolyl-tRNA synthetase [Nakamurella multipartita DSM 44233]
 gi|258555635|gb|ACV78577.1| prolyl-tRNA synthetase [Nakamurella multipartita DSM 44233]
          Length = 585

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/188 (21%), Positives = 82/188 (43%), Gaps = 11/188 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   HR L R     +I     G+  W   G+++ + +   +R ++     +E++ P 
Sbjct: 19  DAEVPSHRLLVRA---GYIRRAAPGIYTWLPLGYRVLRNVERIVREEMDAIGAQEVHFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++ +G W  Y  N+F  +  D    D   + L P +      +      SY+ L
Sbjct: 76  LLPREPYEATGRWTEYGDNLF--RLQDRKQGD---YLLGPTHEEMFTLLVKDMYSSYKGL 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH-NLIISIYKD 417
           P+ L +  + YR+E +    G++R R F   D++ F   +       + H +  I I+  
Sbjct: 131 PLSLYQIQTKYRDE-ARPRAGILRGREFVMKDSYSFDLDDAGLAASYQRHRDAYIRIFDR 189

Query: 418 FGFEKIMV 425
            G   ++V
Sbjct: 190 LGLRYVIV 197


>gi|300119016|ref|ZP_07056727.1| prolyl-tRNA synthetase [Bacillus cereus SJ1]
 gi|298723632|gb|EFI64363.1| prolyl-tRNA synthetase [Bacillus cereus SJ1]
          Length = 476

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 84/396 (21%), Positives = 152/396 (38%), Gaps = 61/396 (15%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAV 321
           G +     G+ +++ +   M  K+K   +E +  P  + + L Q +  H + +   +  V
Sbjct: 37  GCMILRPYGYALWENMQKVMDEKLKATGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWV 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
               D  K      ++P +       F+  ++SY +LP    ++ SV R E +      +
Sbjct: 97  THGGDE-KLAERLCVRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKT--TRPFL 153

Query: 382 RVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           R   F   + H +  T E+   E L I NL  S  +D+    ++    T  EK  G+ A 
Sbjct: 154 RTTEFLWQEGHTIHETAEESQAETLNILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKAT 213

Query: 441 WDDAENIMKGVLDTIKNSSQD--RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
           +            TI++   D   + TG     G  +   F+    D  G+ WQ      
Sbjct: 214 Y------------TIESLMHDGKALQTGTSHNFGTNFSEAFDIKFLDRNGK-WQ------ 254

Query: 499 DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQ 554
                                   +H+  +G   R IG +I     N    +P  ++P+Q
Sbjct: 255 -----------------------YVHQTSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQ 291

Query: 555 AIVTTITSSAVEYAQEIANLLKSH---HLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
            ++  I     E     A  L+ H      ++ D  N+T  +K  E+ +K IPI +  G 
Sbjct: 292 VVIVPIAQHK-EGVLAKATELQGHIQKVARVKIDASNKTPGWKFNEYEMKGIPIRLEVGP 350

Query: 612 KEASERSIGIRRFGSTTTQKVS---LLDAIPILTKE 644
           K+  +  + + R  +   + +S   L + IP L +E
Sbjct: 351 KDIEKNQVVLVRRDTKEKEFISMDQLEERIPALLEE 386


>gi|282164523|ref|YP_003356908.1| prolyl-tRNA synthetase [Methanocella paludicola SANAE]
 gi|282156837|dbj|BAI61925.1| prolyl-tRNA synthetase [Methanocella paludicola SANAE]
          Length = 474

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 74/374 (19%), Positives = 155/374 (41%), Gaps = 59/374 (15%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQ-HLWQQSGHWDSYRANMFAVK 322
           G+  W+  G+ I + + + +R  +  D++E   P ++ +  L ++S H   +   ++ V 
Sbjct: 36  GIYVWYPFGFSIRKKVYNMLRALMDVDHQECYFPMLIPKPELLKESEHIKGFEDEVYWVT 95

Query: 323 CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMR 382
               +  ++   AL+P +      ++   ++S+ +LP++L +  + +R E +     L+R
Sbjct: 96  HGGLSPLEI-PLALRPTSETAIYPMYKLWIRSHADLPLKLYQIVNTFRYE-TKQTRPLIR 153

Query: 383 VRGFTQ-DDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK--LSTRPEKRVGSDA 439
           +R  T   +AH   T    + +  K  +  + +Y DF F K+ V   ++ RP+       
Sbjct: 154 LREITSFKEAH---TAHATWEDAEKQVHEAMDLYSDF-FTKLSVPFVINKRPD------- 202

Query: 440 LWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVD 499
            WD                             GA Y   F+ ++ +  GR  Q GT+   
Sbjct: 203 -WDKF--------------------------PGADYTMAFDTLMPN--GRSLQIGTVH-- 231

Query: 500 FNLPSRFNAFY-VNSHSEKCHPVMIHRAVFGSIER----FIGIMIENFKGNLPLWLSPIQ 554
            +L ++F   Y +    +K     +++  +G  ER     IGI  +N    LP   +P Q
Sbjct: 232 -HLGTKFAKTYDITYEDDKGERQYVNQTCYGISERCIAAVIGIHGDNKGLVLPPNAAPTQ 290

Query: 555 AIVTTIT-----SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIIC 609
            ++  I         ++  +++  +L    ++   D  NE    K  +  +K +P  I  
Sbjct: 291 VVIIPIVFKSGGEEVLDVCRKVKAILNDSGITAVLDDTNERPGAKYYKWEMKGVPFRIEI 350

Query: 610 GDKEASERSIGIRR 623
           G ++    ++ + R
Sbjct: 351 GPRDIKNNAVMLVR 364


>gi|260438479|ref|ZP_05792295.1| phosphoribulokinase family protein [Butyrivibrio crossotus DSM
           2876]
 gi|292809068|gb|EFF68273.1| phosphoribulokinase family protein [Butyrivibrio crossotus DSM
           2876]
          Length = 538

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 79/180 (43%), Gaps = 7/180 (3%)

Query: 25  DVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSCAHIMAE 83
           D+A+ ++ S     +   +NGK+ +L+  V   S IE +T  DP      + S   I+ +
Sbjct: 9   DLADKVTDS-KDDIILAKVNGKLQELTKTVDSDSLIEFVTTADPAGNLTYKRSATLILLK 67

Query: 84  AVQSIWPEVQVAIGPI---IEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQY 140
           AV  I  +  +    +   +  G+Y     +Q  +   +  IE +M+EI+  D P  K  
Sbjct: 68  AVYDIIDKDMIEKFKVEFSLSKGYYCTLKGKQKLTVPLIEAIENRMREIVRADIPIEKIT 127

Query: 141 LSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKL 200
           +S   A + F +K   Y  E L        V +Y    + D   G    STG + K+FKL
Sbjct: 128 MSTGDAIKSF-AKHRMYDKETLFRFRRHSTVNIYSLDGFKDYYYGYMAPSTGYI-KYFKL 185


>gi|229028244|ref|ZP_04184383.1| Prolyl-tRNA synthetase 2 [Bacillus cereus AH1271]
 gi|228733080|gb|EEL83923.1| Prolyl-tRNA synthetase 2 [Bacillus cereus AH1271]
          Length = 476

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 82/400 (20%), Positives = 154/400 (38%), Gaps = 69/400 (17%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAV 321
           G +     G+ +++ +   M  K+K   +E +  P  + + L Q +  H + +   +  V
Sbjct: 37  GCMILRPYGYALWENMQKVMDEKLKATGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWV 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
               D  K      ++P +       F+  ++SY +LP    ++ SV R E +      +
Sbjct: 97  THGGDE-KLAERLCVRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKT--TRPFL 153

Query: 382 RVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           R   F   + H +  T E+   E L I NL  S  +D+    ++    T  EK  G+ A 
Sbjct: 154 RTTEFLWQEGHTIHETAEESQAETLHILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKAT 213

Query: 441 WDDAENIMKGVLDTIKNSSQD--RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
           +            TI++   D   + TG     G  +   F+    D  G+ WQ      
Sbjct: 214 Y------------TIESLMHDGKALQTGTSHNFGTNFSEAFDIKFLDRNGK-WQ------ 254

Query: 499 DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQ 554
                                   +H+  +G   R IG +I     N    +P  ++P+Q
Sbjct: 255 -----------------------YVHQTSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQ 291

Query: 555 AIVTTIT-------SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIII 607
            ++  I        + A E  + I  + +     ++ D  N+T  +K  E+ +K IPI +
Sbjct: 292 VVIVPIAQHKEGVLAKATELQEHIQKVAR-----VKIDASNKTPGWKFNEYEMKGIPIRL 346

Query: 608 ICGDKEASERSIGIRRFGSTTTQKVS---LLDAIPILTKE 644
             G K+  +  + + R  +   + ++   L + IP L +E
Sbjct: 347 EVGPKDIEKNQVVLVRRDTKEKEFIAMDQLEERIPALLEE 386


>gi|186477394|ref|YP_001858864.1| prolyl-tRNA synthetase [Burkholderia phymatum STM815]
 gi|226699127|sp|B2JHD3|SYP_BURP8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|184193853|gb|ACC71818.1| prolyl-tRNA synthetase [Burkholderia phymatum STM815]
          Length = 578

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 7/130 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P V    LWQ+SG W+ Y   +   K  D    D   F + P +      +    +
Sbjct: 68  ELLMPAVQPAELWQESGRWEKYGPELLRFK--DRKQSD---FVIGPTHEEVVTDIARGQI 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLI 411
           KSYR+LPV   +  + +R+E      G+MR R F   DA+ F        E   K+++  
Sbjct: 123 KSYRQLPVNFYQVQTKFRDEIRPRF-GVMRGREFIMKDAYSFDKDMDGLRESYRKMYDAY 181

Query: 412 ISIYKDFGFE 421
           + I+   G +
Sbjct: 182 VRIFTRLGLD 191


>gi|30260563|ref|NP_842940.1| prolyl-tRNA synthetase [Bacillus anthracis str. Ames]
 gi|47525667|ref|YP_017016.1| prolyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49183410|ref|YP_026662.1| prolyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|227813066|ref|YP_002813075.1| prolyl-tRNA synthetase [Bacillus anthracis str. CDC 684]
 gi|254686784|ref|ZP_05150642.1| prolyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066]
 gi|254738991|ref|ZP_05196693.1| prolyl-tRNA synthetase [Bacillus anthracis str. Western North
           America USA6153]
 gi|254744578|ref|ZP_05202257.1| prolyl-tRNA synthetase [Bacillus anthracis str. Kruger B]
 gi|254756164|ref|ZP_05208193.1| prolyl-tRNA synthetase [Bacillus anthracis str. Vollum]
 gi|254761982|ref|ZP_05213831.1| prolyl-tRNA synthetase [Bacillus anthracis str. Australia 94]
 gi|81584321|sp|Q81Z76|SYP2_BACAN RecName: Full=Prolyl-tRNA synthetase 2; AltName: Full=Proline--tRNA
           ligase 2; Short=ProRS 2
 gi|30253931|gb|AAP24426.1| proline--tRNA ligase [Bacillus anthracis str. Ames]
 gi|47500815|gb|AAT29491.1| prolyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49177337|gb|AAT52713.1| prolyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|227002361|gb|ACP12104.1| proline--tRNA ligase [Bacillus anthracis str. CDC 684]
          Length = 508

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 84/396 (21%), Positives = 152/396 (38%), Gaps = 61/396 (15%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAV 321
           G +     G+ +++ +   M  K+K   +E +  P  + + L Q +  H + +   +  V
Sbjct: 37  GCMILRPYGYALWENMQKVMDEKLKATGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWV 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
               D  K      ++P +       F+  ++SY +LP    ++ SV R E +      +
Sbjct: 97  THGGDE-KLAERLCVRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKT--TRPFL 153

Query: 382 RVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           R   F   + H +  T E+   E L I NL  S  +D+    ++    T  EK  G+ A 
Sbjct: 154 RTTEFLWQEGHTIHETAEESQAETLNILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKAT 213

Query: 441 WDDAENIMKGVLDTIKNSSQD--RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
           +            TI++   D   + TG     G  +   F+    D  G+ WQ      
Sbjct: 214 Y------------TIESLMHDGKALQTGTSHNFGTNFSEAFDIKFLDRNGK-WQ------ 254

Query: 499 DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQ 554
                                   +H+  +G   R IG +I     N    +P  ++P+Q
Sbjct: 255 -----------------------YVHQTSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQ 291

Query: 555 AIVTTITSSAVEYAQEIANLLKSH---HLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
            ++  I     E     A  L+ H      ++ D  N+T  +K  E+ +K IPI +  G 
Sbjct: 292 VVIVPIAQHK-EGVLAKATELQGHIQKVARVKIDASNKTPGWKFNEYEMKGIPIRLEVGP 350

Query: 612 KEASERSIGIRRFGSTTTQKVS---LLDAIPILTKE 644
           K+  +  + + R  +   + +S   L + IP L +E
Sbjct: 351 KDIEKNQVVLVRRDTKEKEFISMDQLEERIPALLEE 386


>gi|302879510|ref|YP_003848074.1| prolyl-tRNA synthetase [Gallionella capsiferriformans ES-2]
 gi|302582299|gb|ADL56310.1| prolyl-tRNA synthetase [Gallionella capsiferriformans ES-2]
          Length = 569

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/139 (23%), Positives = 62/139 (44%), Gaps = 7/139 (5%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYR 315
           +I +  SG+  W   G +  + + + +R ++ +    E+  P V    LW ++G W+ + 
Sbjct: 31  YIRKLASGLYTWMPLGLRALRKVEAIVREEMNNSGAIELLMPAVQPAELWDETGRWEVFG 90

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
             M  +K   +       F   P +      +    ++SYR+LPV   +  + +R+E   
Sbjct: 91  PQMLKIKDRHNN-----QFCFGPTHEEVITDIARREIRSYRQLPVNFYQIQTKFRDEVRP 145

Query: 376 SLHGLMRVRGFTQDDAHVF 394
              G+MR R F   DA+ F
Sbjct: 146 RF-GVMRAREFLMKDAYSF 163


>gi|220934463|ref|YP_002513362.1| alanyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7]
 gi|219995773|gb|ACL72375.1| alanyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7]
          Length = 865

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 65/139 (46%), Gaps = 9/139 (6%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKM 126
           R   V+ HS  H+M  A++ I  + VQ     +  D   +DF   QP S++EL +IE+++
Sbjct: 546 RQAVVLNHSATHLMHAALREILGDHVQQKGSLVAPDRLRFDFSHFQPVSAEELERIERRV 605

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGP 186
            E I  ++    + +  ++A        E+  + +       E   L   G   +LC G 
Sbjct: 606 NEAIRANAEAEARIMPIDQAL-------ESGAMALFGEKYGDEVRVLSMGGFSTELCGGT 658

Query: 187 HVRSTGQVKKFFKLMKVAG 205
           HVR TG +   FK++  +G
Sbjct: 659 HVRRTGDI-GVFKILSESG 676


>gi|196040211|ref|ZP_03107513.1| proline--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|229089515|ref|ZP_04220784.1| Prolyl-tRNA synthetase 2 [Bacillus cereus Rock3-42]
 gi|196029066|gb|EDX67671.1| proline--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|228693822|gb|EEL47516.1| Prolyl-tRNA synthetase 2 [Bacillus cereus Rock3-42]
          Length = 476

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 83/400 (20%), Positives = 153/400 (38%), Gaps = 69/400 (17%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAV 321
           G +     G+ +++ +   M  K+K   +E +  P  + + L Q +  H + +   +  V
Sbjct: 37  GCMILRPYGYALWENMQKVMDEKLKATGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWV 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
               D  K      ++P +       F+  ++SY +LP    ++ SV R E +      +
Sbjct: 97  THGGDE-KLAERLCVRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKT--TRPFL 153

Query: 382 RVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           R   F   + H +  T E+   E L I NL  S  +D+    ++    T  EK  G+ A 
Sbjct: 154 RTTEFLWQEGHTIHETAEESQAETLNILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKAT 213

Query: 441 WDDAENIMKGVLDTIKNSSQD--RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
           +            TI++   D   + TG     G  +   F+    D  G+ WQ      
Sbjct: 214 Y------------TIESLMHDGKALQTGTSHNFGTNFSEAFDIKFLDRNGK-WQ------ 254

Query: 499 DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQ 554
                                   +H+  +G   R IG +I     N    +P  ++P+Q
Sbjct: 255 -----------------------YVHQTSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQ 291

Query: 555 AIVTTIT-------SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIII 607
            ++  I        + A E    I  + +     ++ D  N+T  +K  E+ +K IPI +
Sbjct: 292 VVIVPIAQHKEGVLAKATELQGHIQKVAR-----VKIDASNKTPGWKFNEYEMKGIPIRL 346

Query: 608 ICGDKEASERSIGIRRFGSTTTQKVS---LLDAIPILTKE 644
             G K+  +  + + R  +   + +S   L + IP L +E
Sbjct: 347 EVGPKDIEKNQVVLVRRDTKEKEFISMDQLEERIPALLEE 386


>gi|116514305|ref|YP_813211.1| prolyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC BAA-365]
 gi|122274963|sp|Q049U9|SYP_LACDB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|116093620|gb|ABJ58773.1| Prolyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC BAA-365]
 gi|325126002|gb|ADY85332.1| Prolyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           2038]
          Length = 565

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/167 (23%), Positives = 77/167 (46%), Gaps = 8/167 (4%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
           +I +  +GV  +   G+K+ +     +  ++ +    E+  P +L   +W++SG    Y 
Sbjct: 31  YIRQVTAGVYSYLPLGYKVLRKTEKIIEEEMANAGVVEMIMPHMLPASMWEESGRLPKYG 90

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
             MF +K      +  R   L P +      V    LKSY+++P++L +  + +R+E + 
Sbjct: 91  PEMFRLKD-----RHGREMLLGPTHEETFTDVVAKSLKSYKQMPLQLYQIQTKFRDE-NR 144

Query: 376 SLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFE 421
              GL+R R F   D + F  ++EQ+  +        + I+K  G E
Sbjct: 145 PRFGLLRGREFVMLDGYSFAASQEQLDKQFDDEKAAYLKIFKRTGVE 191


>gi|228989573|ref|ZP_04149557.1| Prolyl-tRNA synthetase 2 [Bacillus pseudomycoides DSM 12442]
 gi|228770110|gb|EEM18690.1| Prolyl-tRNA synthetase 2 [Bacillus pseudomycoides DSM 12442]
          Length = 476

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 77/383 (20%), Positives = 149/383 (38%), Gaps = 58/383 (15%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHLWQ-QSGHWDSYRANMFAV 321
           G +     G+ +++ +   M  K+K+  +E +  P  + + L Q +  H + +   +  V
Sbjct: 37  GCMILRPYGYALWENMQKVMDGKLKESGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWV 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
               D  K      ++P +       F+  ++SY +LP    ++ SV R E +      +
Sbjct: 97  THGGDE-KLAERLCVRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKT--TRPFL 153

Query: 382 RVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           R   F   + H +  T E+   E L I NL  S  +D+    ++    T  EK  G+ A 
Sbjct: 154 RTTEFLWQEGHTIHETAEESQEETLNILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKAT 213

Query: 441 WDDAENIMKGVLDTIKNSSQD--RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
           +            TI++   D   + TG     G  +   F+    D  G+ WQ      
Sbjct: 214 Y------------TIESLMHDGKALQTGTSHNFGTNFSEAFDIKFLDRNGK-WQ------ 254

Query: 499 DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQ 554
                                   +H+  +G   R IG +I     N    +P  ++P+Q
Sbjct: 255 -----------------------YVHQTSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQ 291

Query: 555 AIVTTITS---SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
            ++  I       +E A ++   ++     ++ D  N+T  +K  E+ +K +PI +  G 
Sbjct: 292 VVIVPIAQHKEGVLEKATQLQGRIQKV-ARVKIDASNKTPGWKFNEYEMKGVPIRLEVGP 350

Query: 612 KEASERSIGIRRFGSTTTQKVSL 634
           K+  +  + + R  +   + VS+
Sbjct: 351 KDIEKNQVVLVRRDTKEKEFVSM 373


>gi|302348333|ref|YP_003815971.1| Threonyl-tRNA synthetase [Acidilobus saccharovorans 345-15]
 gi|302328745|gb|ADL18940.1| Threonyl-tRNA synthetase [Acidilobus saccharovorans 345-15]
          Length = 468

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 43/93 (46%)

Query: 546 LPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPI 605
           LP WLSP+Q  V  +    VEYA+ +   L         D   + +  ++R      +PI
Sbjct: 356 LPFWLSPLQVAVIPVKDQHVEYARRLLQDLIDVGARAYLDPPTKGLGARVRAAGKAWVPI 415

Query: 606 IIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           I + GDKE    ++ IRR      Q+V   +A+
Sbjct: 416 IAVVGDKEVESNTVNIRRRWLQGQQEVVQAEAL 448


>gi|114764030|ref|ZP_01443271.1| prolyl-tRNA synthetase [Pelagibaca bermudensis HTCC2601]
 gi|114543622|gb|EAU46636.1| prolyl-tRNA synthetase [Roseovarius sp. HTCC2601]
          Length = 445

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/183 (22%), Positives = 79/183 (43%), Gaps = 11/183 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  +G+  W   G+K+ + + + +   + +  +  +  P +    LW++SG +D+Y A
Sbjct: 32  IKQASAGIYSWLPLGYKVLRKIENIIHEEQARAGHIPMLMPTIQSADLWRESGRYDAYGA 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  +    D     R     P        +F   + SYR+LP+ + +    +R+E    
Sbjct: 92  EMLRITDRHD-----RDMLYTPTAEELITDIFRANVSSYRDLPLTMYQIQWKFRDEIRPR 146

Query: 377 LHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
             G+MR R F   D + F  TKE   +   +     +  Y+  G + I ++  + P   +
Sbjct: 147 F-GVMRGREFYMKDGYNFDLTKEDALHAYNRHLVSYLRTYERMGLQAIPMRADSGP---I 202

Query: 436 GSD 438
           G D
Sbjct: 203 GGD 205


>gi|326503454|dbj|BAJ86233.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326506156|dbj|BAJ91317.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 518

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 71/302 (23%), Positives = 126/302 (41%), Gaps = 54/302 (17%)

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH-V 393
           A++P +       F+  ++S+R+LP++  ++ +V R E S      +R R F   + H V
Sbjct: 138 AIRPTSETVMYPYFSKWIRSHRDLPLKCNQWCNVVRWEFSNPTP-FIRSREFLWQEGHTV 196

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
           F TKE+   E L+I  L   IY++F    + V +S                    KG   
Sbjct: 197 FATKEEADEEVLQILELYRRIYEEF----LAVPVS--------------------KG--- 229

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVN 512
             + S  ++         G  Y    E  + +  GR  Q  T   +  N    F+  + N
Sbjct: 230 --RKSEMEKF-------AGGLYTTSVEAFIPNT-GRGIQGATSHCLGQNFAKMFDITFEN 279

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTIT-----SS 563
              E+    M+ +  +    R IG+M+     +    LP  ++PIQ IV  +      ++
Sbjct: 280 EKGERS---MVWQNSWAYTTRSIGVMVMTHGDDKGLVLPPKVAPIQVIVIPVPFKDADTT 336

Query: 564 AVEYAQEIA-NLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
           A++ A E A   L    +  + D R N +  +K  +  +K +P+ I  G K+ + + + I
Sbjct: 337 AIKGACESAVYTLNQAGIRADLDARENYSPGWKYSQWEMKGVPLRIEIGPKDLANKQVRI 396

Query: 622 RR 623
            R
Sbjct: 397 VR 398


>gi|302390146|ref|YP_003825967.1| phosphoribulokinase/uridine kinase [Thermosediminibacter oceani DSM
           16646]
 gi|302200774|gb|ADL08344.1| phosphoribulokinase/uridine kinase [Thermosediminibacter oceani DSM
           16646]
          Length = 551

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/181 (23%), Positives = 83/181 (45%), Gaps = 3/181 (1%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAH 79
            T  +++  +  + +    A  +  +V DL   +  +  IE +       + +   +   
Sbjct: 17  VTFLEISREVQAAFSSPVAAAVMGNRVYDLEHTLTGDADIEFLDLSTEIGMRIYLRTLVF 76

Query: 80  IMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQ 139
           I  +A   + P  +V +   I DG Y +   ++P   D++  IEK+M+E++ +D P +K+
Sbjct: 77  IFIKACGDVLPGSRVHVEHSIGDGIYCEVYWKEPIGEDDVESIEKRMRELVDKDIPIVKR 136

Query: 140 YLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFK 199
            ++ E A   F+      KV +L+ +  K+ V +Y          G  + STG V ++FK
Sbjct: 137 RMAVEDAAIEFKKMGWDDKVRVLKYV-KKDYVDVYELDGLKGFFPGYLLPSTGYV-QWFK 194

Query: 200 L 200
           L
Sbjct: 195 L 195


>gi|295106076|emb|CBL03619.1| prolyl-tRNA synthetase, family II [Gordonibacter pamelaeae
           7-10-1-b]
          Length = 585

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 70/156 (44%), Gaps = 10/156 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R      I +  SGV  +   G ++   +   +R ++     +EI  P 
Sbjct: 23  DAEIASHKLLLRA---GMIRKTASGVYTFLPLGKRVLAKVERIVREEMDAIGSQEIMMPA 79

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW +SG W+ Y   +  +    D     R F L P +     A+  + L+SY+EL
Sbjct: 80  LQPGELWHESGRWNDYGPELMRLVDRHD-----REFCLGPTHEELITALVRNELRSYKEL 134

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           P+ L +    +R+E      GL+R R F   DA+ F
Sbjct: 135 PLTLYQIQVKFRDEIRPRF-GLLRSREFIMKDAYSF 169


>gi|168182030|ref|ZP_02616694.1| proline--tRNA ligase [Clostridium botulinum Bf]
 gi|182674785|gb|EDT86746.1| proline--tRNA ligase [Clostridium botulinum Bf]
          Length = 478

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 81/396 (20%), Positives = 164/396 (41%), Gaps = 61/396 (15%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANM-FA 320
           G +     G+ I++ +  Y+  K+K+  +E ++ P  + ++L Q +  H + +   + + 
Sbjct: 39  GCMIIRPNGYAIWENIQKYVDTKLKEYGHENVSMPIFIPENLLQKEKDHVEGFAPEVAWV 98

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
               DD + +     ++P +       +   ++SY++LP    ++ SV R E +      
Sbjct: 99  THGGDDELAE--RLCVRPTSETLFCEHYAKIVQSYKDLPKLYNQWCSVVRWEKT--TRPF 154

Query: 381 MRVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDA 439
           +R   F   + H +  TKE+  +  LKI N+   + +D     +++   T  EK  G+D 
Sbjct: 155 LRTTEFLWQEGHTIHETKEEAESHSLKILNMYSRLCEDMLAMPVVMGKKTDKEKFAGADD 214

Query: 440 LWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-V 498
            +            TI++   D                          G+  Q GT   +
Sbjct: 215 TY------------TIESLMHD--------------------------GKALQAGTSHYL 236

Query: 499 DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQ 554
             N    F   + + + +  +P   H   +    R IG +I    +N    LP  ++P Q
Sbjct: 237 GQNFSKAFAIQFSDRNGKLDYP---HYTTWAVTTRLIGAIIMVHGDNSGLKLPPRIAPTQ 293

Query: 555 AIVTTITS---SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
           A++  +       +E A+E+   L +  + ++ D  ++   +K  E+ +K IP+ I  G 
Sbjct: 294 AVIIPVAQHKEGVLEKAKELKEKL-AKVVRVKLDDSDKMPGWKYSEYEMKGIPLRIEIGP 352

Query: 612 KEASE-RSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           K+  + +++ +RR     T  +  LD I I  +E L
Sbjct: 353 KDIEKNQAVLVRRDNREKT--IVSLDEIEIKVQEML 386


>gi|294084092|ref|YP_003550850.1| prolyl-tRNA synthetase [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292663665|gb|ADE38766.1| prolyl-tRNA synthetase [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 437

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 74/170 (43%), Gaps = 15/170 (8%)

Query: 231 LTQY-LYFLEESEKR----DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
           L+QY L  L+E+ K      HR + R      + +  +G+  W   G ++   + + +R 
Sbjct: 3   LSQYFLPLLKETPKEAQIASHRLMLRA---GMVQQSSAGIYSWLPLGKRVLDKIENIVRE 59

Query: 286 -KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
            + +    EI  P +    LWQ+SG +D Y A M  +       +  R     P N    
Sbjct: 60  EQNRAGALEILMPTIQPAELWQESGRYDDYGAEMLRI-----VDRHERNMLYGPTNEEQI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
             +F   ++SY+ LP+ +      +R+E      G+MR R F   DA+ F
Sbjct: 115 TDIFRAHVRSYKALPLNMYHIQWKFRDEVRPRF-GIMRGREFLMKDAYSF 163


>gi|307731045|ref|YP_003908269.1| prolyl-tRNA synthetase [Burkholderia sp. CCGE1003]
 gi|307585580|gb|ADN58978.1| prolyl-tRNA synthetase [Burkholderia sp. CCGE1003]
          Length = 578

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 56/130 (43%), Gaps = 7/130 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P V    LWQ+SG W+ Y   +   K  D    D   F + P +      +    +
Sbjct: 68  ELLMPAVQPAELWQESGRWEKYGPELLRFK--DRKQSD---FVIGPTHEEVVTDIARGQI 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLI 411
           KSYR+LPV   +  + +R+E      G+MR R F   DA+ F        E   K++   
Sbjct: 123 KSYRQLPVNFYQIQTKFRDEIRPRF-GVMRGREFIMKDAYSFDKDAAGLRESYRKMYEAY 181

Query: 412 ISIYKDFGFE 421
           + I+   G +
Sbjct: 182 VRIFTRLGLD 191


>gi|296448225|ref|ZP_06890121.1| alanyl-tRNA synthetase [Methylosinus trichosporium OB3b]
 gi|296254265|gb|EFH01396.1| alanyl-tRNA synthetase [Methylosinus trichosporium OB3b]
          Length = 897

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/149 (24%), Positives = 71/149 (47%), Gaps = 12/149 (8%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFSS 116
           ++E+      R+     HS  HI+ EA++ +  +     G ++  D   +DF   +P + 
Sbjct: 547 ALELEIDHSRRNAVRANHSATHILHEALRRVLGDHVAQKGSLVASDRLRFDFTHPKPLTE 606

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLS-----HEKARELFESK-KEAYKVEILESIPAKE- 169
           +E+A++E+   E++  ++P   + ++     H  AR LF  K  +  +V  + S+   + 
Sbjct: 607 EEVAEVERIANEVVQDNAPVDTRLMAQDDAIHSGARALFGEKYGDEVRVVSMGSLSTGQP 666

Query: 170 --NVTLYRQGEWF--DLCRGPHVRSTGQV 194
             ++    Q   F  +LC G HVR TG +
Sbjct: 667 STDLAPTDQHHAFSVELCGGTHVRRTGDI 695


>gi|262369620|ref|ZP_06062948.1| alanyl-tRNA synthetase [Acinetobacter johnsonii SH046]
 gi|262315688|gb|EEY96727.1| alanyl-tRNA synthetase [Acinetobacter johnsonii SH046]
          Length = 892

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 71/155 (45%), Gaps = 15/155 (9%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSS 116
           ++E     D R+     HS  H++  A++ I  E VQ     +  D   +DF  +QP S 
Sbjct: 559 NVEATVKADIRAATARNHSATHLLHAALRQILGEHVQQKGSLVASDILRFDFANDQPVSF 618

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESK-KEAYKVEILESIPAKEN 170
           ++L +IE+ +   +  +S    + L  E A+      LF  K  +  +V  + SI  ++N
Sbjct: 619 EQLQEIERLVNAEVIANSAVTTELLDIESAKAKGAMMLFGEKYGDEVRVLSMGSIIEEKN 678

Query: 171 VTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAG 205
            ++       +LC G HV+ TG +   FK+    G
Sbjct: 679 FSI-------ELCGGIHVKRTGDI-GLFKITSEGG 705


>gi|262281159|ref|ZP_06058941.1| prolyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
 gi|262257390|gb|EEY76126.1| prolyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
          Length = 571

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/147 (23%), Positives = 65/147 (44%), Gaps = 7/147 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E+  P      LW++SG ++ Y   +  
Sbjct: 36  ASGLYTWLPMGTRVLKKVDAIVREEMNRSGAMEVFMPVTQPASLWEESGRYEQYGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            K      +    F L P +      +  + LKSY++LPV   +  + +R+E      G+
Sbjct: 96  FKD-----RHANPFVLGPTHEEVITDMARNELKSYKQLPVNFYQIQTKFRDEIRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKI 407
           MR R F   DA+ F   ++   E   +
Sbjct: 150 MRSREFIMKDAYSFHATQESLQETYDV 176


>gi|228995766|ref|ZP_04155427.1| Prolyl-tRNA synthetase 2 [Bacillus mycoides Rock3-17]
 gi|228764010|gb|EEM12896.1| Prolyl-tRNA synthetase 2 [Bacillus mycoides Rock3-17]
          Length = 476

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 77/383 (20%), Positives = 149/383 (38%), Gaps = 58/383 (15%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHLWQ-QSGHWDSYRANMFAV 321
           G +     G+ +++ +   M  K+K+  +E +  P  + + L Q +  H + +   +  V
Sbjct: 37  GCMILRPYGYALWENMQKVMDGKLKESGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWV 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
               D  K      ++P +       F+  ++SY +LP    ++ SV R E +      +
Sbjct: 97  THGGDE-KLAERLCVRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKT--TRPFL 153

Query: 382 RVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           R   F   + H +  T E+   E L I NL  S  +D+    ++    T  EK  G+ A 
Sbjct: 154 RTTEFLWQEGHTIHETAEESQEETLNILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKAT 213

Query: 441 WDDAENIMKGVLDTIKNSSQD--RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
           +            TI++   D   + TG     G  +   F+    D  G+ WQ      
Sbjct: 214 Y------------TIESLMHDGKALQTGTSHNFGTNFSEAFDIKFLDRNGK-WQ------ 254

Query: 499 DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQ 554
                                   +H+  +G   R IG +I     N    +P  ++P+Q
Sbjct: 255 -----------------------YVHQTSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQ 291

Query: 555 AIVTTITS---SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
            ++  I       +E A ++   ++     ++ D  N+T  +K  E+ +K +PI +  G 
Sbjct: 292 VVIVPIAQHKEGVLEKATQLQGRIQKV-ARVKIDASNKTPGWKFNEYEMKGVPIRLEVGP 350

Query: 612 KEASERSIGIRRFGSTTTQKVSL 634
           K+  +  + + R  +   + VS+
Sbjct: 351 KDIEKNQVVLVRRDTKEKEFVSM 373


>gi|115524551|ref|YP_781462.1| prolyl-tRNA synthetase [Rhodopseudomonas palustris BisA53]
 gi|122296196|sp|Q07NK2|SYP_RHOP5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|115518498|gb|ABJ06482.1| prolyl-tRNA synthetase [Rhodopseudomonas palustris BisA53]
          Length = 439

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/202 (23%), Positives = 87/202 (43%), Gaps = 14/202 (6%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTP 297
           +E+E   HR + R   L    ++ +G+  W   G ++ + +   +R  + +    E+  P
Sbjct: 16  KEAEIVSHRLMLRAGML---RQEAAGIYAWLPLGHRVLKKIEQIVREEQNRAGAIELLMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW++SG +D+Y   M  ++ AD   +  R     P N      +F   +KSY+ 
Sbjct: 73  TLQLADLWRESGRYDAYGPEM--LRIAD---RHKRELLYGPTNEEMITEIFRAYVKSYKS 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYK 416
           LP+ L      +R+E      G+MR R F   DA+ F   E        ++    +  + 
Sbjct: 128 LPLNLYHIQWKFRDEQRPRF-GVMRGREFLMKDAYSFDIDEAAARRAYNRMFVAYLRTFA 186

Query: 417 DFGFEKIMVKLSTRPEKRVGSD 438
             G + I ++  T P   +G D
Sbjct: 187 RMGLKAIPMRAETGP---IGGD 205


>gi|315499825|ref|YP_004088628.1| prolyl-tRNA synthetase [Asticcacaulis excentricus CB 48]
 gi|315417837|gb|ADU14477.1| prolyl-tRNA synthetase [Asticcacaulis excentricus CB 48]
          Length = 439

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/215 (22%), Positives = 92/215 (42%), Gaps = 19/215 (8%)

Query: 231 LTQYLYFL-----EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
           L++YL  L      E++   HR + R      I ++ +G+  W   G ++ + +   +  
Sbjct: 3   LSRYLLPLLKENPSEAQIVSHRLMLRT---GMIRQEAAGIYAWLPLGLRVLRKIEKIVHE 59

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E+  P +    LW++SG +D Y   M  +K   +     R     P N    
Sbjct: 60  EMQRAGAVELLMPTLQLADLWRESGRYDDYGQEMLRIKDRHE-----REMLYGPTNEEMI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +F   +KSY++LP+ L      +R+E      G+MR R F   DA+ F   E    + 
Sbjct: 115 TEIFRGTVKSYKDLPMNLYHIQWKFRDEQRPRF-GVMRGREFLMKDAYSFDIDEASARKA 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD 438
             ++    ++ +   G + + ++  T P   +G D
Sbjct: 174 YNRMFIAYLNTFSRLGLKAVPMRADTGP---IGGD 205


>gi|228906179|ref|ZP_04070068.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis IBL 200]
 gi|228853588|gb|EEM98356.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis IBL 200]
          Length = 502

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 86/422 (20%), Positives = 161/422 (38%), Gaps = 59/422 (13%)

Query: 214 RPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGW 273
           R  L  + G      +E  Q +  +EE   + +  + ++ +L   +    G +     G+
Sbjct: 14  RAFLYFLEGGRMTMAKEQVQAITKMEEDFAQWYTDIVKKAELVDYS-SVKGCMILRPYGY 72

Query: 274 KIFQTLISYMRRKIKDD-YEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDL 331
            +++ +   M  K+K+  +E +  P  + + L Q +  H + +   +  V    D  K  
Sbjct: 73  ALWENMQKVMDEKLKETGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGDE-KLA 131

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
               ++P +       F+  ++SY +LP    ++ SV R E +      +R   F   + 
Sbjct: 132 ERLCVRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKT--TRPFLRTTEFLWQEG 189

Query: 392 H-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKG 450
           H +  T E+   E L I NL  S  +D+    ++    T  EK  G+ A +         
Sbjct: 190 HTIHETAEESQAETLNILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKATY--------- 240

Query: 451 VLDTIKNSSQD--RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
              TI++   D   + TG     G  +   F+    D  G+ WQ                
Sbjct: 241 ---TIESLMHDGKALQTGTSHNFGTNFSEAFDIKFLDRNGK-WQ---------------- 280

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTITSSA 564
                         +H+  +G   R IG +I     N    +P  ++P+Q ++  I    
Sbjct: 281 -------------YVHQTSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQVVIVPIAQHK 327

Query: 565 VEYAQEIANLLKSH---HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
            E     A  L+ H      ++ D  N+T  +K  E+ +K IPI +  G K+  +  + +
Sbjct: 328 -EGVLAKATELQGHIQKVARVKIDASNKTPGWKFNEYEMKGIPIRLEVGPKDIEKNQVVL 386

Query: 622 RR 623
            R
Sbjct: 387 VR 388


>gi|163746280|ref|ZP_02153638.1| alanyl-tRNA synthetase [Oceanibulbus indolifex HEL-45]
 gi|161380165|gb|EDQ04576.1| alanyl-tRNA synthetase [Oceanibulbus indolifex HEL-45]
          Length = 885

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/143 (24%), Positives = 64/143 (44%), Gaps = 14/143 (9%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPI-IEDGFYYDFDKEQPFSSDELAQIEKKM 126
           RS     HS  H++ EA+++   +     G +   D   +DF   +  + +EL Q+E+++
Sbjct: 556 RSAIRANHSATHLLHEALRNALGDHVSQRGSLNAHDRLRFDFSHAKGLTPEELTQVEREV 615

Query: 127 QEIIARDSPFLKQYLSHEKARELFESK--KEAYKVEI-------LESIPAKENVTLYRQG 177
            + + +++P   + ++ + AR +       E Y  E+       LE      N + Y   
Sbjct: 616 NDYVRQNTPVETRIMTPDDARAMGAQALFGEKYGDEVRVVSMGQLEGSGKGSNKSTYS-- 673

Query: 178 EWFDLCRGPHVRSTGQVKKFFKL 200
              +LC G HVR TG +  F  L
Sbjct: 674 --LELCGGTHVRQTGDIGAFVLL 694


>gi|152992232|ref|YP_001357953.1| prolyl-tRNA synthetase [Sulfurovum sp. NBC37-1]
 gi|166980164|sp|A6Q7Y7|SYP_SULNB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|151424093|dbj|BAF71596.1| prolyl-tRNA synthetase [Sulfurovum sp. NBC37-1]
          Length = 568

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 65/139 (46%), Gaps = 7/139 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           GSG+  +   G K+   + + ++ ++ K   +E++   V    LW++SG ++ Y   +  
Sbjct: 37  GSGLYNFLPLGKKVLDRVRNVVKEELDKAGCQEVSLSFVTPASLWEESGRYEKYGKELLR 96

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            K   +       F L P +    V +    +KSY++LP+ L +    +R+E      GL
Sbjct: 97  FKDRKNN-----EFVLGPTHEEMMVNLVRQSVKSYKQLPLNLYQINLKFRDEIRPRF-GL 150

Query: 381 MRVRGFTQDDAHVFCTKEQ 399
           MR R F   D + F T E+
Sbjct: 151 MRGREFLMKDGYSFHTSEE 169


>gi|299768873|ref|YP_003730899.1| prolyl-tRNA synthetase [Acinetobacter sp. DR1]
 gi|298698961|gb|ADI89526.1| prolyl-tRNA synthetase [Acinetobacter sp. DR1]
          Length = 571

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/147 (23%), Positives = 65/147 (44%), Gaps = 7/147 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E+  P      LW++SG ++ Y   +  
Sbjct: 36  ASGLYTWLPMGTRVLKKVDAIVREEMNRSGAMEVFMPVTQPASLWEESGRYEQYGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            K      +    F L P +      +  + LKSY++LPV   +  + +R+E      G+
Sbjct: 96  FKD-----RHTNPFVLGPTHEEVITDMARNELKSYKQLPVNFYQIQTKFRDEIRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKI 407
           MR R F   DA+ F   ++   E   +
Sbjct: 150 MRSREFIMKDAYSFHATQESLQETYDV 176


>gi|218662503|ref|ZP_03518433.1| alanyl-tRNA synthetase [Rhizobium etli IE4771]
          Length = 478

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 57/220 (25%), Positives = 101/220 (45%), Gaps = 25/220 (11%)

Query: 54  VREGSIEIITPEDPR-SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKE 111
           V++G   ++T +  R S     HS  H++ EA++ +        G ++  +   +D    
Sbjct: 162 VKDGDAVVLTVDHARRSRLRANHSATHLLHEALREVLGTHVAQKGSLVAPERLRFDVSHP 221

Query: 112 QPFSSDELAQIEKKMQEIIARDSPFLKQYLS-----HEKARELFESKKEAYKVEILESIP 166
           +P S++EL  +E    EI+ ++SP   + +S      E A  LF    E Y  E+   + 
Sbjct: 222 KPMSAEELKIVEDMANEIVLQNSPVTTRLMSVDDAIAEGAMALF---GEKYGDEV-RVVG 277

Query: 167 AKENVTLYRQGEWF--DLCRGPHVRSTGQVKKFFKLMKVA-GAYWR------GDSNRPML 217
             E V   + G+ +  +LC G HV +TGQ+     L + A GA  R      G+S R  L
Sbjct: 278 MGEGVRGAKAGKPYSIELCGGTHVSATGQIGLIRVLGESAVGAGVRRIEAVTGESAREYL 337

Query: 218 S----RIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREM 253
           +    R+   A + + +  + L  + E+   + RKL +E+
Sbjct: 338 AEQDERVKALAASLKVQPGEVLSRV-EAMMDERRKLEKEL 376


>gi|254724859|ref|ZP_05186642.1| prolyl-tRNA synthetase [Bacillus anthracis str. A1055]
          Length = 510

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 83/400 (20%), Positives = 153/400 (38%), Gaps = 69/400 (17%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAV 321
           G +     G+ +++ +   M  K+K   +E +  P  + + L Q +  H + +   +  V
Sbjct: 37  GCMILRPYGYALWENMQKVMDEKLKATGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWV 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
               D  K      ++P +       F+  ++SY +LP    ++ SV R E +      +
Sbjct: 97  THGGDE-KLAERLCVRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKT--TRPFL 153

Query: 382 RVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           R   F   + H +  T E+   E L I NL  S  +D+    ++    T  EK  G+ A 
Sbjct: 154 RTTEFLWQEGHTIHETAEESQAETLNILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKAT 213

Query: 441 WDDAENIMKGVLDTIKNSSQD--RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
           +            TI++   D   + TG     G  +   F+    D  G+ WQ      
Sbjct: 214 Y------------TIESLMHDGKALQTGTSHNFGTNFSEAFDIKFLDRNGK-WQ------ 254

Query: 499 DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQ 554
                                   +H+  +G   R IG +I     N    +P  ++P+Q
Sbjct: 255 -----------------------YVHQTSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQ 291

Query: 555 AIVTTIT-------SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIII 607
            ++  I        + A E    I  + +     ++ D  N+T  +K  E+ +K IPI +
Sbjct: 292 VVIVPIAQHKEGVLAKATELQGHIQKVAR-----VKIDASNKTPGWKFNEYEMKGIPIRL 346

Query: 608 ICGDKEASERSIGIRRFGSTTTQKVS---LLDAIPILTKE 644
             G K+  +  + + R  +   + +S   L + IP L +E
Sbjct: 347 EVGPKDIEKNQVVLVRRDTKEKEFISMDQLEERIPALLEE 386


>gi|312385395|gb|EFR29915.1| hypothetical protein AND_00854 [Anopheles darlingi]
          Length = 1070

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 72/312 (23%), Positives = 115/312 (36%), Gaps = 58/312 (18%)

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
            A++P +       +   ++SYR+LP+RL ++ +V R E        +R R F   + H 
Sbjct: 670 IAVRPTSETVMYPAYAKWIQSYRDLPIRLNQWNNVVRWE-FKHPQPFLRTREFLWQEGHT 728

Query: 394 -FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
            F TK +   E L I +L   +Y D     ++    T  EK  G D              
Sbjct: 729 AFATKAEADEEVLTILDLYAKVYTDLLAIPVVKGRKTEKEKFAGGD-------------- 774

Query: 453 DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYV 511
                                 Y    E  +  A GR  Q  T   +  N    F+  Y 
Sbjct: 775 ----------------------YTTTVEAYI-SASGRAIQGATSHHLGQNFSRMFDIVY- 810

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTT--ITSSAV 565
             H E      +++  +G   R IG+MI     N  L L P    IQ ++    IT++  
Sbjct: 811 -EHPETKEKEYVYQNSWGITTRTIGVMIMVHADNQGLVLPPRVACIQVVIVPCGITATTT 869

Query: 566 --------EYAQEIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASE 616
                   E  +E+   L    +  E D+R N +  +K     +K +P+ I  G K+  +
Sbjct: 870 DEERRRLYESCRELERSLVGAGIRCEGDYRDNYSPGWKYNHWELKGVPVRIELGFKDLQK 929

Query: 617 -RSIGIRRFGST 627
              + +RR   T
Sbjct: 930 GECVAVRRDNGT 941


>gi|78222566|ref|YP_384313.1| prolyl-tRNA synthetase [Geobacter metallireducens GS-15]
 gi|114152198|sp|Q39VY6|SYP_GEOMG RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|78193821|gb|ABB31588.1| Prolyl-tRNA synthetase [Geobacter metallireducens GS-15]
          Length = 570

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 46/102 (45%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P V    LWQ+S  W+ Y   +   K   D       F L P +      +    +
Sbjct: 68  ELLMPSVQPAELWQESKRWEQYGKELLRFKDRKDA-----EFCLGPTHEEVITDLVRREV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSYR+LP+ L +  S +R+E      GLMR R F   DA+ F
Sbjct: 123 KSYRQLPLNLYQVQSKFRDEIRPRF-GLMRGREFIMKDAYSF 163


>gi|91977335|ref|YP_569994.1| prolyl-tRNA synthetase [Rhodopseudomonas palustris BisB5]
 gi|123762679|sp|Q135Z6|SYP_RHOPS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|91683791|gb|ABE40093.1| prolyl-tRNA synthetase [Rhodopseudomonas palustris BisB5]
          Length = 439

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/202 (23%), Positives = 88/202 (43%), Gaps = 14/202 (6%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTP 297
           +E+E   HR + R   L    ++ +G+  W   G ++ + +   +R  + +    E+  P
Sbjct: 16  KEAEIVSHRLMLRAGML---RQEAAGIYAWLPLGHRVLKKIEQIVREEQNRAGAIELLMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW++SG +D+Y   M  ++ AD   +  R     P N      +F   +KSY+ 
Sbjct: 73  TLQLADLWRESGRYDAYGPEM--LRIAD---RHKRELLYGPTNEEMITEIFRAYVKSYKS 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYK 416
           LP+ L      +R+E      G+MR R F   DA+ F   E    +   ++    +  + 
Sbjct: 128 LPLNLYHIQWKFRDEQRPRF-GVMRGREFLMKDAYSFDVDEAAARKSYNRMFVAYLRTFA 186

Query: 417 DFGFEKIMVKLSTRPEKRVGSD 438
             G + I ++  T P   +G D
Sbjct: 187 RMGLKAIPMRAETGP---IGGD 205


>gi|260886940|ref|ZP_05898203.1| proline--tRNA ligase [Selenomonas sputigena ATCC 35185]
 gi|260863002|gb|EEX77502.1| proline--tRNA ligase [Selenomonas sputigena ATCC 35185]
          Length = 543

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 62/139 (44%), Gaps = 9/139 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +   GV  +    W+  + +   +R ++     +E+  P +    +WQ+SG W  +  
Sbjct: 7   IRKAAGGVYTYLPLAWRTIKKIEQIIREEMDAAGGQELCMPIMQPAEIWQESGRWSVFGQ 66

Query: 317 NMFAVK-CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            MF +K C        R F L P +      +    ++SY++LP+ L +  + YR+E   
Sbjct: 67  EMFRLKDCHG------REFCLGPTHEEMITTLVRDEVRSYKQLPLLLYQIQNKYRDEIRP 120

Query: 376 SLHGLMRVRGFTQDDAHVF 394
              GLMR R F   D + F
Sbjct: 121 RF-GLMRSREFIMKDLYSF 138


>gi|313124034|ref|YP_004034293.1| prolyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           ND02]
 gi|312280597|gb|ADQ61316.1| Prolyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           ND02]
          Length = 565

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/167 (23%), Positives = 75/167 (44%), Gaps = 8/167 (4%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
           +I +  +GV  +   G+K+ +     +  ++ +    E+  P +L   +W++SG    Y 
Sbjct: 31  YIRQVTAGVYSYLPLGYKVLRKTEKIIEEEMANAGVVEMIMPHMLPSSMWEESGRLPKYG 90

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
             MF +K      +  R   L P +      V    LKSY+++P+ L +  + +R+E   
Sbjct: 91  PEMFRLKD-----RHGREMLLGPTHEETFTDVVAKSLKSYKQMPLHLYQIQTKFRDENRP 145

Query: 376 SLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFE 421
              GL+R R F   D + F  ++EQ+  +        + I+K  G E
Sbjct: 146 RF-GLLRGREFVMLDGYSFAASQEQLDKQFDNEKAAYLKIFKRTGVE 191


>gi|294101431|ref|YP_003553289.1| phosphoribulokinase/uridine kinase [Aminobacterium colombiense DSM
           12261]
 gi|293616411|gb|ADE56565.1| phosphoribulokinase/uridine kinase [Aminobacterium colombiense DSM
           12261]
          Length = 547

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/177 (24%), Positives = 79/177 (44%), Gaps = 4/177 (2%)

Query: 22  TGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSCAHI 80
           +G DV            VA  +N  +  L   V E S +E +       + V R S +  
Sbjct: 20  SGKDVLSKADIDGGSHIVAWRVNSYLRPLGWVVDEDSEVEFVDTSSFEGMEVYRRSLSFS 79

Query: 81  MAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQY 140
           +  A Q    +  V I   I DG+Y++   ++  + +E+ +I K +++++ RD P  ++ 
Sbjct: 80  LVLAAQRALGK-NVTIKHSISDGYYWEL-PDRDLTEEEVLRINKALRDLVNRDVPITREV 137

Query: 141 LSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
           +  +KAR +FE +       +     A++ V LYR  + +     P   STG ++ F
Sbjct: 138 VPLDKARRIFERQGNPESARLF-MWAAEDPVELYRCEDNYGFYYAPLAPSTGYLRVF 193


>gi|72383677|ref|YP_293032.1| prolyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A]
 gi|114152229|sp|Q46GR7|SYP_PROMT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|72003527|gb|AAZ59329.1| prolyl-tRNA synthetase, bacterial [Prochlorococcus marinus str.
           NATL2A]
          Length = 596

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 64/137 (46%), Gaps = 24/137 (17%)

Query: 273 WKIFQTLISYMRRKIKDDYEEINT--------PQVLDQHLWQQSGHWDSYRAN---MFAV 321
           WK+ + + S +        EE++T        PQ+    +W++SG W SY      MF++
Sbjct: 47  WKVLKKITSIVE-------EELSTKGCLQTLLPQLQPSEIWERSGRWKSYTKGEGIMFSL 99

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           K  D   K+L    L P +      + +  + SY++LP+ + +  + +R+E      GLM
Sbjct: 100 K--DRQGKEL---GLGPTHEEVITQIISQTIHSYKQLPINIFQIQTKFRDEIRPRF-GLM 153

Query: 382 RVRGFTQDDAHVFCTKE 398
           R R F   DA+ F   E
Sbjct: 154 RSREFIMKDAYSFHANE 170


>gi|297243824|ref|ZP_06927754.1| prolyl-tRNA synthetase [Gardnerella vaginalis AMD]
 gi|296888245|gb|EFH26987.1| prolyl-tRNA synthetase [Gardnerella vaginalis AMD]
          Length = 604

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/183 (24%), Positives = 79/183 (43%), Gaps = 20/183 (10%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
           +I +   GV  W   G K+   + + +R +I     +E++ P +L +  ++ +  W+ Y 
Sbjct: 29  YIRKSAPGVWTWLPLGLKVLNKVQAIIREEINGIGAQEVHFPALLPREPYEATNRWEEYG 88

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----SYRELPVRLAEFGSVYRN 371
            N+F +K  D    D        +  P H  VF   +K    SY++LPV L +  + YR+
Sbjct: 89  DNIFRLK--DRHEADY-------LLAPTHEEVFTLLVKDMYSSYKDLPVTLYQIQTKYRD 139

Query: 372 E--PSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC-LKIHNLIISIYKDFGFEKIMVKLS 428
           E  P     GL+R R F   D + F   E       ++       I+   G + ++V   
Sbjct: 140 EFRPRA---GLIRGREFIMQDGYSFSIDEDGLKSAYVEERAAYARIFNRLGIKYVIVHAV 196

Query: 429 TRP 431
           + P
Sbjct: 197 SGP 199


>gi|312115730|ref|YP_004013326.1| alanyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100]
 gi|311220859|gb|ADP72227.1| alanyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100]
          Length = 894

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 73/151 (48%), Gaps = 13/151 (8%)

Query: 53  PVREG-SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDK 110
           P++ G ++E+      R+     HS  H++ EA++          G +++ D   +DF  
Sbjct: 542 PLKVGDAVEMQVDHARRTAIRANHSATHLLHEALRETLGTHVTQKGSLVDPDKLRFDFSH 601

Query: 111 EQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKAR-----ELFESKKEAYKVEILESI 165
            +P S +ELA +E+    ++ RDSP + + ++ + A       LF  +K   +V ++   
Sbjct: 602 PKPLSKEELAAVEELANAVVLRDSPVVTRLMAVDDAVAAGAMALF-GEKYGEEVRVVSMG 660

Query: 166 PAKENVTLYRQGEWF--DLCRGPHVRSTGQV 194
            A  +    R    F  +LC G HVR+TG++
Sbjct: 661 EANHD---ERGSRAFSVELCGGTHVRATGEI 688


>gi|168178993|ref|ZP_02613657.1| prolyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
 gi|226950778|ref|YP_002805869.1| prolyl-tRNA synthetase [Clostridium botulinum A2 str. Kyoto]
 gi|259511586|sp|C1FM10|SYP_CLOBJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|182670280|gb|EDT82256.1| prolyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
 gi|226841931|gb|ACO84597.1| proline--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
          Length = 478

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 81/396 (20%), Positives = 164/396 (41%), Gaps = 61/396 (15%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANM-FA 320
           G +     G+ I++ +  Y+  K+K+  +E ++ P  + ++L Q +  H + +   + + 
Sbjct: 39  GCMIIRPNGYAIWENIQKYVDTKLKEYGHENVSMPIFIPENLLQKEKDHVEGFAPEVAWV 98

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
               DD + +     ++P +       +   ++SY++LP    ++ SV R E +      
Sbjct: 99  THGGDDELAE--RLCVRPTSETLFCEHYAKIVQSYKDLPKLYNQWCSVVRWEKT--TRPF 154

Query: 381 MRVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDA 439
           +R   F   + H +  TKE+  +  LKI N+   + +D     +++   T  EK  G+D 
Sbjct: 155 LRTTEFLWQEGHTIHETKEEAESHSLKILNMYSRLCEDMLAMPVVMGKKTDKEKFAGADD 214

Query: 440 LWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-V 498
            +            TI++   D                          G+  Q GT   +
Sbjct: 215 TY------------TIESLMHD--------------------------GKALQAGTSHYL 236

Query: 499 DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQ 554
             N    F   + + + +  +P   H   +    R IG +I    +N    LP  ++P Q
Sbjct: 237 GQNFSKAFAIQFSDRNGKLDYP---HYTTWAVTTRLIGAIIMVHGDNSGLKLPPRIAPTQ 293

Query: 555 AIVTTITS---SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
           A++  +       +E A+E+   L +  + ++ D  ++   +K  E+ +K IP+ I  G 
Sbjct: 294 AVIIPVAQHKEGVLEKAKELKEKL-AKVVRVKLDDSDKMPGWKYSEYEMKGIPLRIEIGP 352

Query: 612 KEASE-RSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           K+  + +++ +RR     T  +  LD I I  +E L
Sbjct: 353 KDIEKNQAVLVRRDNREKT--IVSLDEIEIKVQEML 386


>gi|147668699|ref|YP_001213517.1| alanyl-tRNA synthetase [Dehalococcoides sp. BAV1]
 gi|205830043|sp|A5FSU1|SYA_DEHSB RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|146269647|gb|ABQ16639.1| alanyl-tRNA synthetase [Dehalococcoides sp. BAV1]
          Length = 871

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/216 (25%), Positives = 96/216 (44%), Gaps = 23/216 (10%)

Query: 44  NGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIED 102
            G+V +    + E +   I  E  R +A   H+  HI+  A++ +  E VQ     +  D
Sbjct: 531 QGRVINGCLKISEAATAHINEERRRDIAR-NHTATHILQTALREVLGEQVQQRGSVVTPD 589

Query: 103 GFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAY 157
              +DF   +P S DE+ ++E+ + + I R+ P   + + +  A E     LF  +K   
Sbjct: 590 RLRFDFSHLKPMSKDEMRRVEEFVNDKIRRNLPVYAEEMPYRHALEEGVTALF-GEKYGD 648

Query: 158 KVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVA--GAYWRGDSNRP 215
           +V +L          + R     +LC G HV ++G++   FK+M  +  GA  R      
Sbjct: 649 RVRVLR---------VGRPAVSAELCGGTHVTASGEI-ALFKIMSESSVGAGLR--RIEA 696

Query: 216 MLSRIYGTAWNTQQE-LTQYLYFLEESEKRDHRKLA 250
           +  R      N QQ+ L++    LE + +   RKLA
Sbjct: 697 VTGREAEAFINLQQDSLSELSGMLESTAEESPRKLA 732


>gi|315453026|ref|YP_004073296.1| prolyl-tRNA synthetase [Helicobacter felis ATCC 49179]
 gi|315132078|emb|CBY82706.1| prolyl-tRNA synthetase [Helicobacter felis ATCC 49179]
          Length = 577

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/167 (23%), Positives = 75/167 (44%), Gaps = 10/167 (5%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDY--EEINTPQVLDQHLWQQSGHWDSY 314
           ++ + GSG+  +   G K+    I  + +++ D Y  +E     V+   LWQ+SG ++ Y
Sbjct: 31  YLQQMGSGLYHFLPLGHKVLSK-IRAVVKEVMDSYGAQECTLGFVVPASLWQESGRFEQY 89

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
              + +     + +       L P +      +    +KSY++LP+ L +  + +R+E  
Sbjct: 90  GKELLSFPDRKNNL-----CVLSPTHEEAITQIAKSHIKSYKQLPLNLYQIHTKFRDEIR 144

Query: 375 GSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGF 420
               GLMR R F   DA+ F  + E +  E  ++H     I+   G 
Sbjct: 145 PRF-GLMRAREFVMKDAYSFHASTECLDKEFERMHAAYSEIFSRLGL 190


>gi|73748005|ref|YP_307244.1| alanyl-tRNA synthetase [Dehalococcoides sp. CBDB1]
 gi|83305846|sp|Q3ZWC3|SYA_DEHSC RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|73659721|emb|CAI82328.1| alanyl-tRNA synthetase [Dehalococcoides sp. CBDB1]
          Length = 871

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/216 (25%), Positives = 96/216 (44%), Gaps = 23/216 (10%)

Query: 44  NGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIED 102
            G+V +    + E +   I  E  R +A   H+  HI+  A++ +  E VQ     +  D
Sbjct: 531 QGRVINGCLKISEAATAHINEERRRDIAR-NHTATHILQTALREVLGEQVQQRGSVVTPD 589

Query: 103 GFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAY 157
              +DF   +P S DE+ ++E+ + + I R+ P   + + +  A E     LF  +K   
Sbjct: 590 RLRFDFSHLKPMSKDEMRRVEEFVNDKIRRNLPVYAEEMPYRHALEEGVTALF-GEKYGD 648

Query: 158 KVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVA--GAYWRGDSNRP 215
           +V +L          + R     +LC G HV ++G++   FK+M  +  GA  R      
Sbjct: 649 RVRVLR---------VGRPAVSAELCGGTHVTASGEI-ALFKIMSESSVGAGLR--RIEA 696

Query: 216 MLSRIYGTAWNTQQE-LTQYLYFLEESEKRDHRKLA 250
           +  R      N QQ+ L++    LE + +   RKLA
Sbjct: 697 VTGREAEAFINLQQDSLSELSGMLESTAEESPRKLA 732


>gi|305664329|ref|YP_003860617.1| prolyl-tRNA synthetase [Ignisphaera aggregans DSM 17230]
 gi|304378898|gb|ADM28737.1| prolyl-tRNA synthetase [Ignisphaera aggregans DSM 17230]
          Length = 493

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 84/380 (22%), Positives = 157/380 (41%), Gaps = 67/380 (17%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHLWQ-QSGHWDSYRANMFAV 321
           G+  W   G++I + +I  +R  + +  +EE+  P ++ + L++ +S H   +   +  V
Sbjct: 37  GMGIWMPYGFQIRRNVIEIIRNLLNETGHEEVLFPILIPEILFRRESEHVRGFEGEVLWV 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
               +   D++   L+P +      + +  +KSY++LP +  +  SV+R E   +   ++
Sbjct: 97  TRGGNEELDVK-LVLRPTSETAISYMESFWIKSYKQLPKKYYQVVSVFRYETKMT-KPMI 154

Query: 382 RVRGFTQ-DDAHV----FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
           RVR  T   +AH     F   E+   E + I++     + + G   I   +S RP+    
Sbjct: 155 RVREITTFKEAHTVHENFEDSERQVLEAIDIYS---KFFDELGIPYI---ISRRPQ---- 204

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
               WD                             GA Y   F+ +  D  GR  Q GT+
Sbjct: 205 ----WDKF--------------------------AGALYTIAFDTVFPD--GRAIQIGTV 232

Query: 497 QVDFNLPSRFNAFYVNSHSEKCHPV-MIHRAVFGSIERFIGIMI----ENFKGNLPLWLS 551
               NL   F + +     ++   +    +  +G  ER I  +I    ++    LP  ++
Sbjct: 233 H---NLGQTFTSVFDVKIQKRDETIDYAWQTSYGISERVIASIIAIHSDDIGLILPSNVA 289

Query: 552 PIQAIVT-------TITSSAVEYAQEIANLLKSHHLSIETDFRNETI-NYKIREHSIKKI 603
           P   ++         I  S + Y  +I N+LK +++    D R +     K RE  +K +
Sbjct: 290 PYTVVIIPIPHQDEKIYQSIINYCNDIHNILKVNNIRSLIDERLDVKPAEKYRECELKGV 349

Query: 604 PIIIICGDKEASERSIGIRR 623
           PI I  G KE S+ ++ + R
Sbjct: 350 PIRIEIGFKEVSQNTVTLFR 369


>gi|291087654|ref|ZP_06347045.2| alanine--tRNA ligase [Clostridium sp. M62/1]
 gi|291074356|gb|EFE11720.1| alanine--tRNA ligase [Clostridium sp. M62/1]
          Length = 868

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/154 (25%), Positives = 73/154 (47%), Gaps = 21/154 (13%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSD 117
           + +   ++ R L    HS  H++ +A++++    V+ A   + +D   +DF      + D
Sbjct: 539 VTLTVNKENRELTARNHSATHLLHKALRTVLGTHVEQAGSLVTKDRLRFDFTHFSAMTPD 598

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVT 172
           E+A +EK + + IA   P +   +S E+A++     LF  K               E+V 
Sbjct: 599 EIAAVEKMVNDEIAASLPVVTDIMSLEEAKKTGAMALFGEK-------------YGESVR 645

Query: 173 LYRQGEW-FDLCRGPHVRSTGQVKKFFKLMKVAG 205
           + R G++  +LC G HV +T  +   FK++  AG
Sbjct: 646 VVRMGDFSTELCGGTHVPNTSTISA-FKIVSEAG 678


>gi|124025277|ref|YP_001014393.1| prolyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A]
 gi|152112940|sp|A2C0W8|SYP_PROM1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|123960345|gb|ABM75128.1| Prolyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A]
          Length = 596

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 64/137 (46%), Gaps = 24/137 (17%)

Query: 273 WKIFQTLISYMRRKIKDDYEEINT--------PQVLDQHLWQQSGHWDSYRAN---MFAV 321
           WK+ + + S +        EE++T        PQ+    +W++SG W SY      MF++
Sbjct: 47  WKVLKKITSIVE-------EELSTKGCLQTLLPQLQPSEIWERSGRWKSYTQGEGIMFSL 99

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           K  D   K+L    L P +      + +  + SY++LP+ + +  + +R+E      GLM
Sbjct: 100 K--DRQGKEL---GLGPTHEEVITQIISQTIHSYKQLPINIFQIQTKFRDEIRPRF-GLM 153

Query: 382 RVRGFTQDDAHVFCTKE 398
           R R F   DA+ F   E
Sbjct: 154 RSREFIMKDAYSFHANE 170


>gi|126175060|ref|YP_001051209.1| prolyl-tRNA synthetase [Shewanella baltica OS155]
 gi|166980155|sp|A3D6H7|SYP_SHEB5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|125998265|gb|ABN62340.1| prolyl-tRNA synthetase [Shewanella baltica OS155]
          Length = 571

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/165 (23%), Positives = 72/165 (43%), Gaps = 8/165 (4%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I  + SG+  +   G ++ + + + +R ++ K    EI  P V    LW ++G W+ +  
Sbjct: 32  IRRNASGLYSYLPTGLRVLRKVEAIVREEMNKAGAIEILMPMVQPADLWVETGRWEKFGP 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            +   K   +     R F L P +      +    + SY++LP+ L +  + +R+E    
Sbjct: 92  ELLRFKDRHN-----RDFVLGPTHEEVITDLIRKEVSSYKQLPLNLYQIQTKFRDEVRPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDFGF 420
             G+MR R F   DA+ F       NE  + ++N   +I    G 
Sbjct: 147 F-GMMRSREFLMKDAYSFHLDVDTMNETYEAMYNAYSNILTRMGL 190


>gi|325121489|gb|ADY81012.1| alanyl-tRNA synthetase [Acinetobacter calcoaceticus PHEA-2]
          Length = 883

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 70/155 (45%), Gaps = 15/155 (9%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSS 116
           ++E I   D R      HS  H++  A++ I    VQ     +  D   +DF  +QP + 
Sbjct: 550 NVEAIVKADIREATARNHSATHLLHAALRQILGSHVQQKGSLVASDILRFDFANDQPVTF 609

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESK-KEAYKVEILESIPAKEN 170
           ++L Q+E+ +   I  +S    + L  E A+      LF  K  +  +V  + SI  ++N
Sbjct: 610 EQLQQVERLVNAEIIANSAVTTELLDIEAAKAKGAMMLFGEKYGDEVRVLSMGSIIDEKN 669

Query: 171 VTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAG 205
            ++       +LC G HV+ TG +   FK+    G
Sbjct: 670 FSI-------ELCGGIHVKRTGDI-GLFKITSEGG 696


>gi|294140027|ref|YP_003556005.1| prolyl-tRNA synthetase [Shewanella violacea DSS12]
 gi|293326496|dbj|BAJ01227.1| prolyl-tRNA synthetase [Shewanella violacea DSS12]
          Length = 569

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/204 (21%), Positives = 92/204 (45%), Gaps = 15/204 (7%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI- 287
           +++YL   ++    D   ++ ++ L    +  + SG+  W   G ++ + + + +R ++ 
Sbjct: 3   VSKYLLSTQKETPADAEVVSHQLMLRAGMVRRNASGLYSWLPTGLRVLRKVEAIVREEMN 62

Query: 288 KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
           K    EI  P V    LW ++G W+ +   +   +   +     R F L P +      +
Sbjct: 63  KAGAVEILMPMVQPADLWIETGRWEKFGPELLRFQDRHN-----RDFVLGPTHEEVITDI 117

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
               + SY++LP+ L +  + +R+E      G+MR R F   DA+ F   ++  +     
Sbjct: 118 IRKEINSYKQLPLTLYQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHLDQESMDVT--- 173

Query: 408 HNLIISIYKDFGFEKIMVKLSTRP 431
           ++ +   Y +  FE++   LS RP
Sbjct: 174 YDAMFQAYNNI-FERM--GLSFRP 194


>gi|83592911|ref|YP_426663.1| prolyl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170]
 gi|114152243|sp|Q2RU19|SYP_RHORT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|83575825|gb|ABC22376.1| Prolyl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170]
          Length = 435

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 78/194 (40%), Gaps = 11/194 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+E   HR + R      I +  SG+  W   G ++ + +   +R  +     +EI  P 
Sbjct: 17  EAEIVSHRLMLRAG---MIRQHASGIYNWLPLGLRVLRKIEQVVREEQDATGAQEILMPT 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW++SG +D Y   M  +       +  R     P +      VF   +KSYR L
Sbjct: 74  IQSADLWRESGRYDDYGKEMLRI-----VDRHERDMLYGPTHEEVATDVFRKNVKSYRAL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKD 417
           P  L +    +R+E      G+MR R F   D + F  T E   +   K+    +  +  
Sbjct: 129 PQNLYQIQWKFRDEVRPRF-GVMRGREFLMKDNYSFDLTYEGARHSYNKMFVAYLRTFAR 187

Query: 418 FGFEKIMVKLSTRP 431
            G + I +   T P
Sbjct: 188 LGLKAIPMAADTGP 201


>gi|325685949|gb|EGD28012.1| proline--tRNA ligase [Lactobacillus delbrueckii subsp. lactis DSM
           20072]
          Length = 565

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/167 (23%), Positives = 76/167 (45%), Gaps = 8/167 (4%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
           +I +  +GV  +   G+K+ +     +  ++ +    E+  P +L   +W++SG    Y 
Sbjct: 31  YIRQVTAGVYSYLPLGYKVLRKTEKIIEEEMANAGVVEMIMPHMLPASMWEESGRLPKYG 90

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
             MF +K      +  R   L P +      V    LKSY+++P+ L +  + +R+E + 
Sbjct: 91  PEMFRLKD-----RHGREMLLGPTHEETFTDVVAKSLKSYKQMPLHLYQIQTKFRDE-NR 144

Query: 376 SLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFE 421
              GL+R R F   D + F  ++EQ+  +        + I+K  G E
Sbjct: 145 PRFGLLRGREFVMLDGYSFAASQEQLDKQFDNEKAAYLKIFKRTGVE 191


>gi|205830265|sp|Q11IW3|SYA_MESSB RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
          Length = 887

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/155 (23%), Positives = 71/155 (45%), Gaps = 18/155 (11%)

Query: 54  VREGSIEIITP------EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYY 106
           V++G++ I  P       + R+     HS  H++ EA++ +        G ++  D   +
Sbjct: 537 VKKGTVRISEPVSLRVDHERRTRIRANHSATHLLHEALREVLGTHVAQKGSLVAPDRLRF 596

Query: 107 DFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLS-----HEKARELFESK--KEAYKV 159
           DF   +P + +EL QIE    E++ +++P + + ++      E A  LF  K   E   V
Sbjct: 597 DFSHPKPIAEEELQQIEDLANEVVLQNAPVVTRLMAVDDAIAEGAMALFGEKYGDEVRVV 656

Query: 160 EILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQV 194
            + +    +++   Y      +LC G HV +TG +
Sbjct: 657 SMGKGTQGEKSGKTYS----LELCGGTHVNATGDI 687


>gi|317008889|gb|ADU79469.1| prolyl-tRNA synthetase [Helicobacter pylori India7]
          Length = 577

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/180 (23%), Positives = 77/180 (42%), Gaps = 11/180 (6%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           + H+ LA+   ++ +   GSG+  +     K+   + +   +++++   + I    V+  
Sbjct: 21  KSHKHLAQAGYIYQV---GSGIYNFLPLAKKVLDKIENITHKRMQEHGAQNILMSFVVLA 77

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SG  D Y   +   K   D       F L P        +  + +KSY++LPV L
Sbjct: 78  SLWEKSGRLDKYGKELLVFKDRKDN-----DFVLSPTLEENITEIAANFIKSYKQLPVHL 132

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT-KEQMFNECLKIHNLIISIYKDFGFE 421
            +  + +R+E      GL+R R F   D + F    E +  E L   N    I  D G +
Sbjct: 133 YQIHTKFRDEIRPRF-GLVRAREFIMKDGYSFHEDAESLDEEFLNTQNAYKEILSDLGLD 191


>gi|302342678|ref|YP_003807207.1| prolyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
 gi|301639291|gb|ADK84613.1| prolyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
          Length = 571

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/146 (23%), Positives = 65/146 (44%), Gaps = 7/146 (4%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
            G+  W   G ++ + + + +R+++     +E+  P V    LW++SG WD Y   +   
Sbjct: 37  GGIYTWLPMGLRVLRKVEAIVRQEMNAAGAQELLMPGVQPAELWRESGRWDFYGRELLRF 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
               D       + L P +      +    ++SYR++P+ L +  + +R+E      G+M
Sbjct: 97  VDRHDN-----EYCLAPTHEEVITDLARREIQSYRDMPLNLYQIQTKFRDEIRPRF-GVM 150

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLKI 407
           R R F   DA+ F   E    +  +I
Sbjct: 151 RAREFLMKDAYSFDASEDAAAQSYQI 176


>gi|217972680|ref|YP_002357431.1| prolyl-tRNA synthetase [Shewanella baltica OS223]
 gi|254782915|sp|B8EDD0|SYP_SHEB2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|217497815|gb|ACK46008.1| prolyl-tRNA synthetase [Shewanella baltica OS223]
          Length = 571

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/165 (23%), Positives = 72/165 (43%), Gaps = 8/165 (4%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I  + SG+  +   G ++ + + + +R ++ K    EI  P V    LW ++G W+ +  
Sbjct: 32  IRRNASGLYSYLPTGLRVLRKVEAIVREEMNKAGAIEILMPMVQPADLWVETGRWEKFGP 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            +   K   +     R F L P +      +    + SY++LP+ L +  + +R+E    
Sbjct: 92  ELLRFKDRHN-----RDFVLGPTHEEVITDLIRKEVSSYKQLPLNLYQIQTKFRDEVRPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDFGF 420
             G+MR R F   DA+ F       NE  + ++N   +I    G 
Sbjct: 147 F-GMMRSREFLMKDAYSFHLDVDTMNETYEAMYNAYSNILTRMGL 190


>gi|307636931|gb|ADN79381.1| prolyl tRNA synthetase [Helicobacter pylori 908]
 gi|325995521|gb|ADZ50926.1| Prolyl-tRNA synthetase [Helicobacter pylori 2018]
 gi|325997119|gb|ADZ49327.1| Prolyl-tRNA synthetase [Helicobacter pylori 2017]
          Length = 577

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/180 (23%), Positives = 77/180 (42%), Gaps = 11/180 (6%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           + H+ LA+   ++ +   GSG+  +     K+   + +   +++++   + I    V+  
Sbjct: 21  KSHKHLAQAGYIYQV---GSGIYNFLPLAKKVLDKIENITHKRMQEHGAQNILMSFVVLA 77

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SG  D Y   +   K   D       F L P        +  + +KSY++LPV L
Sbjct: 78  SLWEKSGRLDKYGKELLVFKDRKDN-----DFVLSPTLEENITEIAANFIKSYKQLPVHL 132

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT-KEQMFNECLKIHNLIISIYKDFGFE 421
            +  + +R+E      GL+R R F   D + F    E +  E L   N    I  D G +
Sbjct: 133 YQIHTKFRDEIRPRF-GLVRAREFIMKDGYSFHEDTESLDKEFLNTQNAYKEILSDLGLD 191


>gi|304409899|ref|ZP_07391518.1| prolyl-tRNA synthetase [Shewanella baltica OS183]
 gi|307302394|ref|ZP_07582152.1| prolyl-tRNA synthetase [Shewanella baltica BA175]
 gi|304351308|gb|EFM15707.1| prolyl-tRNA synthetase [Shewanella baltica OS183]
 gi|306914432|gb|EFN44853.1| prolyl-tRNA synthetase [Shewanella baltica BA175]
          Length = 571

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/165 (23%), Positives = 72/165 (43%), Gaps = 8/165 (4%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I  + SG+  +   G ++ + + + +R ++ K    EI  P V    LW ++G W+ +  
Sbjct: 32  IRRNASGLYSYLPTGLRVLRKVEAIVREEMNKAGAIEILMPMVQPADLWVETGRWEKFGP 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            +   K   +     R F L P +      +    + SY++LP+ L +  + +R+E    
Sbjct: 92  ELLRFKDRHN-----RDFVLGPTHEEVITDLIRKEVSSYKQLPLNLYQIQTKFRDEVRPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDFGF 420
             G+MR R F   DA+ F       NE  + ++N   +I    G 
Sbjct: 147 F-GMMRSREFLMKDAYSFHLDVDTMNETYEAMYNAYSNILTRMGL 190


>gi|256371437|ref|YP_003109261.1| prolyl-tRNA synthetase [Acidimicrobium ferrooxidans DSM 10331]
 gi|256008021|gb|ACU53588.1| prolyl-tRNA synthetase [Acidimicrobium ferrooxidans DSM 10331]
          Length = 572

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/189 (23%), Positives = 82/189 (43%), Gaps = 12/189 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E   HR L R   +  +A   SGV      G+++ + + + +  +  +    ++  P 
Sbjct: 17  DAEVASHRLLVRGGYMRALA---SGVWSLLPLGFRVLERIGAIVAEEFDRAGGNQLLLPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ++G        M  V    D+   L +  L P +    +A     L SYR L
Sbjct: 74  LHPVELWQETGR----NVTMDDVLMRVDS--KLGSLVLGPTHEEAVIAAVGPDLASYRSL 127

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKD 417
           P  + +  + +R+EP     GLMR R F   D + F   +E M     +++   + +Y+ 
Sbjct: 128 PAFVYQIQTKFRDEPRARF-GLMRTREFVMADGYTFDVDREHMRVSYQRVYEAYLRVYRR 186

Query: 418 FGFEKIMVK 426
            G + + V+
Sbjct: 187 LGLKAVPVE 195


>gi|148381286|ref|YP_001255827.1| prolyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
 gi|153932635|ref|YP_001385663.1| prolyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|153936422|ref|YP_001389069.1| prolyl-tRNA synthetase [Clostridium botulinum A str. Hall]
 gi|171769224|sp|A7FYU0|SYP_CLOB1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|172047866|sp|A5I768|SYP_CLOBH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|148290770|emb|CAL84901.1| prolyl-tRNA synthetase 1 [Clostridium botulinum A str. ATCC 3502]
 gi|152928679|gb|ABS34179.1| prolyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|152932336|gb|ABS37835.1| proline--tRNA ligase [Clostridium botulinum A str. Hall]
          Length = 478

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 81/396 (20%), Positives = 164/396 (41%), Gaps = 61/396 (15%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANM-FA 320
           G +     G+ I++ +  Y+  K+K+  +E ++ P  + ++L Q +  H + +   + + 
Sbjct: 39  GCMIIRPNGYGIWENIQKYVDTKLKEYGHENVSMPIFIPENLLQKEKDHVEGFAPEVAWV 98

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
               DD + +     ++P +       +   ++SY++LP    ++ SV R E +      
Sbjct: 99  THGGDDELAE--RLCVRPTSETLFCEHYAKIVQSYKDLPKLYNQWCSVVRWEKT--TRPF 154

Query: 381 MRVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDA 439
           +R   F   + H +  TKE+  +  LKI N+   + +D     +++   T  EK  G+D 
Sbjct: 155 LRTTEFLWQEGHTIHETKEEAESHSLKILNMYSRLCEDMLAMPVVMGKKTDKEKFAGADD 214

Query: 440 LWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-V 498
            +            TI++   D                          G+  Q GT   +
Sbjct: 215 TY------------TIESLMHD--------------------------GKALQAGTSHYL 236

Query: 499 DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQ 554
             N    F   + + + +  +P   H   +    R IG +I    +N    LP  ++P Q
Sbjct: 237 GQNFSKAFAIQFSDRNGKLDYP---HYTTWAVTTRLIGAIIMVHGDNSGLKLPPRIAPTQ 293

Query: 555 AIVTTITS---SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
           A++  +       +E A+E+   L +  + ++ D  ++   +K  E+ +K IP+ I  G 
Sbjct: 294 AVIIPVAQHKEGVLEKAKELKEKL-AKVVRVKLDDSDKMPGWKYSEYEMKGIPLRIEIGP 352

Query: 612 KEASE-RSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           K+  + +++ +RR     T  +  LD I I  +E L
Sbjct: 353 KDIEKNQAVLVRRDNREKT--IVSLDEIEIKVQEML 386


>gi|153001389|ref|YP_001367070.1| prolyl-tRNA synthetase [Shewanella baltica OS185]
 gi|166980156|sp|A6WQB8|SYP_SHEB8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|151366007|gb|ABS09007.1| prolyl-tRNA synthetase [Shewanella baltica OS185]
          Length = 571

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/165 (23%), Positives = 72/165 (43%), Gaps = 8/165 (4%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I  + SG+  +   G ++ + + + +R ++ K    EI  P V    LW ++G W+ +  
Sbjct: 32  IRRNASGLYSYLPTGLRVLRKVEAIVREEMNKAGAIEILMPMVQPADLWVETGRWEKFGP 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            +   K   +     R F L P +      +    + SY++LP+ L +  + +R+E    
Sbjct: 92  ELLRFKDRHN-----RDFVLGPTHEEVITDLIRKEVSSYKQLPLNLYQIQTKFRDEVRPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDFGF 420
             G+MR R F   DA+ F       NE  + ++N   +I    G 
Sbjct: 147 F-GMMRSREFLMKDAYSFHLDVDTMNETYEAMYNAYSNILTRMGL 190


>gi|160876111|ref|YP_001555427.1| prolyl-tRNA synthetase [Shewanella baltica OS195]
 gi|189083513|sp|A9KVR8|SYP_SHEB9 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|160861633|gb|ABX50167.1| prolyl-tRNA synthetase [Shewanella baltica OS195]
 gi|315268308|gb|ADT95161.1| prolyl-tRNA synthetase [Shewanella baltica OS678]
          Length = 571

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/165 (23%), Positives = 72/165 (43%), Gaps = 8/165 (4%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I  + SG+  +   G ++ + + + +R ++ K    EI  P V    LW ++G W+ +  
Sbjct: 32  IRRNASGLYSYLPTGLRVLRKVEAIVREEMNKAGAIEILMPMVQPADLWVETGRWEKFGP 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            +   K   +     R F L P +      +    + SY++LP+ L +  + +R+E    
Sbjct: 92  ELLRFKDRHN-----RDFVLGPTHEEVITDLIRKEVSSYKQLPLNLYQIQTKFRDEVRPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDFGF 420
             G+MR R F   DA+ F       NE  + ++N   +I    G 
Sbjct: 147 F-GMMRSREFLMKDAYSFHLDVDTMNETYEAMYNAYSNILTRMGL 190


>gi|255535772|ref|YP_003096143.1| prolyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10]
 gi|255341968|gb|ACU08081.1| Prolyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10]
          Length = 491

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 59/301 (19%), Positives = 120/301 (39%), Gaps = 56/301 (18%)

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECL 405
            + + ++SYR+LP+ + ++ +V R E    L   +R   F   + H    T+++   E  
Sbjct: 131 TYKNWVQSYRDLPILINQWANVVRWEMRTRL--FLRTAEFLWQEGHTAHATRDEALEETE 188

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
           K+ ++     ++F    ++  + T  E+  G+D  +                        
Sbjct: 189 KMLDVYADFTENFMAIPVIRGIKTESERFAGADETY------------------------ 224

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIH 524
                         E +++D  G+  Q GT   +  N    F+  + N   +  H     
Sbjct: 225 ------------CIEALMQD--GKALQAGTSHFLGQNFGKAFDVKFTNREGKIEHA---W 267

Query: 525 RAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTITSSAVEYAQ------EIANL 574
              +G+  R +G +I     +    LP  L+PIQ ++  I     + +Q      ++   
Sbjct: 268 GTSWGTSTRLVGALIMTHSDDLGLVLPPSLAPIQVVIVPIFKGEEQLSQIDAVAYDLQAK 327

Query: 575 LKSHHLSIETDFRNETI-NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
           LK+  +S++ D R E    +K  E+ +K +PI I  G ++   +++ I R  + T +   
Sbjct: 328 LKAKGISVKYDNRTENKPGWKFAEYELKGVPIRIAMGARDLENKTVEIARRDNLTKETQP 387

Query: 634 L 634
           L
Sbjct: 388 L 388


>gi|114771071|ref|ZP_01448511.1| alanyl-tRNA synthetase [alpha proteobacterium HTCC2255]
 gi|114548353|gb|EAU51239.1| alanyl-tRNA synthetase [alpha proteobacterium HTCC2255]
          Length = 885

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/155 (25%), Positives = 73/155 (47%), Gaps = 6/155 (3%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPI-IEDGFYYDFDKEQPFSS 116
           S E+    + RS     H+  H++ EA++S   +     G +  E+   +DF   +  + 
Sbjct: 546 SAELSVNTEMRSGICNSHTATHLLNEALRSKLGQHIAQRGSLNAENRLRFDFSHSKSMTQ 605

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESK--KEAYKVEI-LESIPAKENVTL 173
            EL  +E ++  +I ++S    + ++ E AREL       E Y  E+ + S+  K++   
Sbjct: 606 SELRDVELEVNNLIRQNSSVKTRIMTPEDARELGAQALFGEKYGDEVRVVSMGNKKDSGK 665

Query: 174 YRQGEWF--DLCRGPHVRSTGQVKKFFKLMKVAGA 206
              G  +  +LC G HV+ TGQ+  F  + + A A
Sbjct: 666 GLAGNTYSLELCGGTHVQRTGQIGAFALIAESASA 700


>gi|110633619|ref|YP_673827.1| alanyl-tRNA synthetase [Mesorhizobium sp. BNC1]
 gi|110284603|gb|ABG62662.1| alanyl-tRNA synthetase [Chelativorans sp. BNC1]
          Length = 909

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/155 (23%), Positives = 71/155 (45%), Gaps = 18/155 (11%)

Query: 54  VREGSIEIITP------EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYY 106
           V++G++ I  P       + R+     HS  H++ EA++ +        G ++  D   +
Sbjct: 559 VKKGTVRISEPVSLRVDHERRTRIRANHSATHLLHEALREVLGTHVAQKGSLVAPDRLRF 618

Query: 107 DFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLS-----HEKARELFESK--KEAYKV 159
           DF   +P + +EL QIE    E++ +++P + + ++      E A  LF  K   E   V
Sbjct: 619 DFSHPKPIAEEELQQIEDLANEVVLQNAPVVTRLMAVDDAIAEGAMALFGEKYGDEVRVV 678

Query: 160 EILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQV 194
            + +    +++   Y      +LC G HV +TG +
Sbjct: 679 SMGKGTQGEKSGKTYS----LELCGGTHVNATGDI 709


>gi|322420273|ref|YP_004199496.1| prolyl-tRNA synthetase [Geobacter sp. M18]
 gi|320126660|gb|ADW14220.1| prolyl-tRNA synthetase [Geobacter sp. M18]
          Length = 573

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 6/106 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P V    LW++SG WD Y   +   K   D       F + P +      +    +
Sbjct: 68  ELLMPAVQPAELWKESGRWDFYGKELLRFKDRKDA-----EFCMGPTHEEVITDLIRKEI 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE 398
           +SYR++P+ L +    +R+E      GLMR R F   DA+ F   E
Sbjct: 123 RSYRQMPINLYQIQGKFRDEIRPRF-GLMRGREFIMKDAYSFDVNE 167


>gi|195144990|ref|XP_002013479.1| GL24160 [Drosophila persimilis]
 gi|194102422|gb|EDW24465.1| GL24160 [Drosophila persimilis]
          Length = 1725

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 72/318 (22%), Positives = 123/318 (38%), Gaps = 59/318 (18%)

Query: 334  FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
             A++P +       +   ++SYR+LP+RL ++ +V R E        +R R F   + H 
Sbjct: 1328 IAVRPTSETVMYPAYAKWIQSYRDLPIRLNQWNNVVRWE-FKHPQPFLRTREFLWQEGHT 1386

Query: 394  -FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
             F ++E+   E L I +L   +Y       ++    T  EK  G D             +
Sbjct: 1387 AFASQEEAVKEVLDILDLYALVYTHLLAIPVVKGRKTEKEKFAGGD---------YTTTV 1437

Query: 453  DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
            +   ++S   I        G  +   FE + +D                 P      YV 
Sbjct: 1438 EAFISASGRAIQGATSHHLGQNFSKMFEIVYED-----------------PETQQKKYVF 1480

Query: 513  SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVT----TITSSA 564
             +S            +G   R IG+MI     N  L L P    IQAIV     T+ +  
Sbjct: 1481 QNS------------WGITTRTIGVMIMVHADNQGLVLPPNVACIQAIVVPCGITVNTKD 1528

Query: 565  VEYAQ------EIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKE-ASE 616
             E AQ      ++   L    +  E D+R N +  +K     +K +P+ +  G K+  ++
Sbjct: 1529 EERAQLLDACKKLEQTLVGAGVRCEGDYRDNYSPGWKFNHWELKGVPLRLEVGPKDLKAQ 1588

Query: 617  RSIGIRRFGSTTTQKVSL 634
            + + +RR    T +K++L
Sbjct: 1589 QLVAVRR---DTGEKITL 1603


>gi|169828364|ref|YP_001698522.1| prolyl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
 gi|168992852|gb|ACA40392.1| Prolyl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
          Length = 483

 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 72/396 (18%), Positives = 156/396 (39%), Gaps = 61/396 (15%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHLWQ-QSGHWDSYRANM-FA 320
           G I +   G++I++ +   M R+ KD  +     P ++ +  +Q +  H + +   + + 
Sbjct: 34  GCIAFKPDGYEIWEHIQEEMDRRFKDTGHRNAYFPMLIPESFFQKEKDHIEGFSPELPWV 93

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            + A + +++    AL+P +      ++++ +KSYR+LPV + ++ +V+R E        
Sbjct: 94  TEAAGEKLEE--RLALRPTSETMIGHLYSNWIKSYRDLPVLINQWANVFRWE--KKTLPF 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKL---STRPEKRVGS 437
           +R   F   + H     E+   +  K    ++ IYK+   + + + +      P +R   
Sbjct: 150 IRTSEFLWQEGHTAHIDEE---DARKETMQMLDIYKEVVEQVLAIPVYDGQKTPSERFA- 205

Query: 438 DALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ 497
                       G +DT    +  +    V  G   + G KF                  
Sbjct: 206 ------------GAVDTYSIEAMMKNGKAVQAGTSHYLGTKF------------------ 235

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG--IMIENFKGN--LPLWLSPI 553
                   FN  Y+N  ++  +   +H   +G+  R IG  IM+   +    LP  ++P 
Sbjct: 236 -----AEAFNIKYLNKANQHEY---VHTTSWGTSTRLIGSVIMVHGDEQGLILPPRIAPT 287

Query: 554 QAIVTTI-----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIII 608
           Q ++  +         +E    I   LK+  + +  D  +++  +K  E  +K +P+ I 
Sbjct: 288 QVVLIPVGPWKKNPQIMEQLDAIFAALKAKGIRVRLDDSDQSPGFKFNEWELKGVPVRIE 347

Query: 609 CGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            G ++       ++       Q + L   +  + +E
Sbjct: 348 LGPRDLENNQALLKARDEDEKQTIELATVVAAIEEE 383


>gi|26449536|dbj|BAC41894.1| unknown protein [Arabidopsis thaliana]
          Length = 186

 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 74/147 (50%), Gaps = 9/147 (6%)

Query: 2   PSD-IKLTF-PDGSIKNFPVHATGS-DVAESISRSLAKKAVAVAINGKVCDLSDPVR-EG 57
           P D IK+T  PDG  K      T   D+A  IS+ LAK A+  ++N  + D++ P+  + 
Sbjct: 39  PHDPIKITLLPDGIEKEGRRWETSPMDIAVQISKGLAKSALVSSVNHVLWDMNRPLEGDC 98

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPI--IEDGFYYD--FDKEQP 113
           S+EI   +  +      HS AHI+ +A++  +   ++ IGP    ++GFYYD  +  E  
Sbjct: 99  SLEIFGFDSDQGRNTFWHSSAHILGQALEQEY-GCKLCIGPCEPRDEGFYYDSLYYGELG 157

Query: 114 FSSDELAQIEKKMQEIIARDSPFLKQY 140
            + +    IE  +  I   D  F+ +Y
Sbjct: 158 LNDNHFPNIEASVAYISFADIFFVLRY 184


>gi|325067070|ref|ZP_08125743.1| prolyl-tRNA synthetase [Actinomyces oris K20]
          Length = 605

 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/193 (21%), Positives = 82/193 (42%), Gaps = 19/193 (9%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   HR L R     ++     GV  W   G +  + +   +R+++     +E++ P 
Sbjct: 19  DAEVASHRLLVRAC---YVRRAAPGVYTWLPLGLRTLRKIEDIVRQEMDAMGGQEVHFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L    +Q +G WD Y   +F ++   D            +  P H  +F   +K    S
Sbjct: 76  LLPAEPYQATGRWDDYGPTLFKLRDRKDG---------DYLLAPTHEEMFTLAVKDLYSS 126

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH-NLIIS 413
           Y++LP  + +  + YR+E +    G++R R F   D++ F   +       + H +    
Sbjct: 127 YKDLPAVIYQIQTKYRDE-ARPRAGIIRGREFVMKDSYSFDIDDAGLAAAYQAHRDTYER 185

Query: 414 IYKDFGFEKIMVK 426
           I+   G + ++V 
Sbjct: 186 IFTRLGLDYVIVN 198


>gi|317179366|dbj|BAJ57154.1| prolyl-tRNA synthetase [Helicobacter pylori F30]
          Length = 577

 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/180 (23%), Positives = 77/180 (42%), Gaps = 11/180 (6%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           + H+ LA+   ++ +   GSG+  +     K+   + +   +++++   + I    V+  
Sbjct: 21  KSHKHLAQAGYIYQV---GSGIYNFLPLAKKVLDKIENITHKRMQEHGAQNILMSFVVLA 77

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SG  D Y   +   K   D       F L P        +  + +KSY++LPV L
Sbjct: 78  SLWERSGRLDKYGKELLVFKDRKDN-----DFVLSPTLEENITEIAANFIKSYKQLPVHL 132

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT-KEQMFNECLKIHNLIISIYKDFGFE 421
            +  + +R+E      GL+R R F   D + F    E +  E L   N    I  D G +
Sbjct: 133 YQIHTKFRDEIRPRF-GLVRAREFIMKDGYSFHEDAESLDKEFLNTQNAYKEILSDLGLD 191


>gi|302497924|ref|XP_003010961.1| hypothetical protein ARB_02859 [Arthroderma benhamiae CBS 112371]
 gi|291174507|gb|EFE30321.1| hypothetical protein ARB_02859 [Arthroderma benhamiae CBS 112371]
          Length = 581

 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 8/100 (8%)

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
           F L P +      V +  +KSYR+LP+R+ +    YR+EP    HGL+R R F   D + 
Sbjct: 93  FLLAPTHEEEITTVVSGLIKSYRDLPLRVYQISRKYRDEPR-PRHGLLRGREFVMKDLYT 151

Query: 394 FCTKEQMFNECLKIHNLI----ISIYKDFGFEKIMVKLST 429
           F + E    E +K +N +    IS++K+     ++   S+
Sbjct: 152 FDSTEA---EAIKTYNTVKEAYISLFKELKLPYVVASASS 188


>gi|254488857|ref|ZP_05102062.1| prolyl-tRNA synthetase [Roseobacter sp. GAI101]
 gi|214045726|gb|EEB86364.1| prolyl-tRNA synthetase [Roseobacter sp. GAI101]
          Length = 446

 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/183 (22%), Positives = 79/183 (43%), Gaps = 11/183 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  +G+  W   G+K+ + + + +   + +  +  +  P +    LW++SG +D+Y  
Sbjct: 32  IKQSAAGIYSWLPLGFKVLRKIENIVHEEQQRAGHIPMLMPTLQSADLWKESGRYDAYGP 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  +K   D     R     P N      +F   + SY++LP+ L      +R+E    
Sbjct: 92  EMLRIKDRQD-----RDMLYGPTNEEMITDIFRSHVGSYKDLPLTLYHIQWKFRDEIRPR 146

Query: 377 LHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
             G+MR R F   D + F  TKE   +   +     +  Y+  G + I ++  + P   +
Sbjct: 147 F-GVMRGREFLMKDGYNFDLTKEDALHAYNRHLVSYLRSYERMGLQAIPMRADSGP---I 202

Query: 436 GSD 438
           G D
Sbjct: 203 GGD 205


>gi|89895282|ref|YP_518769.1| hypothetical protein DSY2536 [Desulfitobacterium hafniense Y51]
 gi|114152191|sp|Q24UG7|SYP_DESHY RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|89334730|dbj|BAE84325.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 575

 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 73/168 (43%), Gaps = 10/168 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+E   H+ L R      I +  +G+  +   G ++ + +   +R ++     +E+  P 
Sbjct: 17  EAEVVSHQLLVRA---GLIRKSAAGIYTYLPLGLRVLRKIEQIVREEMDAKGGQEVLLPI 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW++SG WD Y   +  +    +     R F L P +      +    ++SY++L
Sbjct: 74  IQPAELWRESGRWDLYGQELMRLNDRHN-----REFCLGPTHEEIITDLIRGEIRSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           P+ L +  + YR+E      GLMR R F   D + F   E    E  K
Sbjct: 129 PLLLYQIQNKYRDERRPRF-GLMRGREFIMKDLYSFDRDEAGLAESYK 175


>gi|154248002|ref|YP_001418960.1| alanyl-tRNA synthetase [Xanthobacter autotrophicus Py2]
 gi|205830288|sp|A7IMR0|SYA_XANP2 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|154162087|gb|ABS69303.1| alanyl-tRNA synthetase [Xanthobacter autotrophicus Py2]
          Length = 884

 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/199 (23%), Positives = 83/199 (41%), Gaps = 23/199 (11%)

Query: 14  IKNFPVHATGSDVAESISRSLAKKAVA---VAINGKVCDL--------SDPVREGSIEII 62
           +   P +A        I R   +  VA   VA   K+ DL        +  ++ G+  ++
Sbjct: 492 LNQTPFYAESGGQVGDIGRVSGEGGVAAQVVATQKKLGDLFVHEVKVETGTLKRGTALVL 551

Query: 63  TPEDPRSLAV-IRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELA 120
             +  R  AV   HS  H++ EA++ +  +     G ++  D   +DF   +P S  ELA
Sbjct: 552 EVDHARRAAVRANHSATHLLHEALRRVLGDHVAQKGSLVAPDRLRFDFSHPKPLSGGELA 611

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEK-----ARELFESKKEAYKVEILESIPAKENVTLYR 175
           ++E      + R+ P   + ++ +      AR LF  +K   +V ++       N   Y 
Sbjct: 612 EVETIANRFVLRNEPVETRIMAVDDAITSGARALF-GEKYGDEVRVVSMGTDDGNGAPYS 670

Query: 176 QGEWFDLCRGPHVRSTGQV 194
                +LC G HV+ TG +
Sbjct: 671 ----VELCGGTHVKRTGDI 685


>gi|329850610|ref|ZP_08265455.1| prolyl-tRNA synthetase [Asticcacaulis biprosthecum C19]
 gi|328840925|gb|EGF90496.1| prolyl-tRNA synthetase [Asticcacaulis biprosthecum C19]
          Length = 443

 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/187 (22%), Positives = 79/187 (42%), Gaps = 19/187 (10%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLD-----QHLWQQSGHWD 312
           I +  +G+  W   G K+ + +     R ++++     + Q+L        LW++SG ++
Sbjct: 32  IRQQAAGIYAWLPLGLKVLRKV----ERIVEEEMARAGSIQLLMPTLQLADLWRESGRYE 87

Query: 313 SYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE 372
            Y   M  +K   D     R     P        VF   +KSY++LP+ L +    +R+E
Sbjct: 88  DYGQEMLRIKDRHD-----RDLLYGPTAEEAVTEVFRASVKSYKDLPLNLYQISWKFRDE 142

Query: 373 PSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFEKIMVKLSTRP 431
                 G+MR R F   DA+ F   E    +   ++    ++ +   G + + ++  T P
Sbjct: 143 QRPRF-GVMRGREFLMKDAYSFDVDEASARKAYNRMFIAYLNTFSRMGLKAVPMRADTGP 201

Query: 432 EKRVGSD 438
              +G D
Sbjct: 202 ---IGGD 205


>gi|310815331|ref|YP_003963295.1| prolyl-tRNA synthetase [Ketogulonicigenium vulgare Y25]
 gi|308754066|gb|ADO41995.1| prolyl-tRNA synthetase [Ketogulonicigenium vulgare Y25]
          Length = 445

 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/201 (22%), Positives = 86/201 (42%), Gaps = 14/201 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           E++   HR + R      I ++ +G+  W   G+K+   L   +   + +  +  +  P 
Sbjct: 17  EAQILSHRYMLRAG---MIKQESAGIYAWLPLGYKVLSRLEKIVHEEQQRAGHIPLLMPT 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW++SG +D+Y   M  +     T ++ R     P N      +F   ++SY++L
Sbjct: 74  LQSADLWRESGRYDAYGPEMLRM-----TDRNKREMLFGPTNEEMITDIFRSYVRSYKDL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKD 417
           P+ L      +R+E      G+MR R F   D + F  T+E   +   +     +  Y+ 
Sbjct: 129 PLTLYHIQWKFRDEMRPRF-GVMRGREFLMKDGYNFDLTREDALHAYNRHMVSYLRTYER 187

Query: 418 FGFEKIMVKLSTRPEKRVGSD 438
            G   I ++  + P   +G D
Sbjct: 188 MGLTAIPMRADSGP---IGGD 205


>gi|293608692|ref|ZP_06690995.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292829265|gb|EFF87627.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 878

 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 70/155 (45%), Gaps = 15/155 (9%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSS 116
           ++E I   D R      HS  H++  A++ I    VQ     +  D   +DF  +QP + 
Sbjct: 545 NVEAIVKADIREATARNHSATHLLHAALRQILGSHVQQKGSLVASDILRFDFANDQPVTF 604

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESK-KEAYKVEILESIPAKEN 170
           ++L Q+E+ +   I  +S    + L  E A+      LF  K  +  +V  + SI  ++N
Sbjct: 605 EQLQQVERLVNAEIIANSAVTTELLDIEAAKAKGAMMLFGEKYGDEVRVLSMGSIIDEKN 664

Query: 171 VTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAG 205
            ++       +LC G HV+ TG +   FK+    G
Sbjct: 665 FSI-------ELCGGIHVKRTGDI-GLFKITSEGG 691


>gi|291557497|emb|CBL34614.1| prolyl-tRNA synthetase, family II [Eubacterium siraeum V10Sc8a]
          Length = 574

 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 62/130 (47%), Gaps = 14/130 (10%)

Query: 288 KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
           K D +E+  P V+   LWQ+SG +DS  + +        T ++     L   +    V +
Sbjct: 63  KIDGQEVQFPVVMPASLWQESGRYDSIGSELLRF-----TDRNRMPMVLGMTHEEAAVHL 117

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNE--PSGSLHGLMRVRGFTQDDAHVFCTK----EQMF 401
                KSY + P  + +  + +R+E  P G   GL+RVR FT  DA+ F T     EQ +
Sbjct: 118 VREYGKSYTKYPFMIYQIQTKFRDEARPRG---GLIRVREFTMKDAYSFHTSQEDLEQYY 174

Query: 402 NECLKIHNLI 411
           ++C K +  I
Sbjct: 175 DKCHKAYENI 184


>gi|237750646|ref|ZP_04581126.1| alanyl-tRNA synthetase [Helicobacter bilis ATCC 43879]
 gi|229373736|gb|EEO24127.1| alanyl-tRNA synthetase [Helicobacter bilis ATCC 43879]
          Length = 897

 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 62/135 (45%), Gaps = 10/135 (7%)

Query: 66  DPRSLAVIRH-SCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIE 123
           D     +I+H S  H++  A++ I        G ++E +   +DF   +  S DEL QIE
Sbjct: 584 DSSRFEIIKHHSATHLLHYALRQILGSHIAQAGSLVEANRLRFDFSHPKALSVDELEQIE 643

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
             + E IA  SP + + +  E+A+        A     L      E+V +   G+  +LC
Sbjct: 644 SLVNEEIAESSPQICETMGIEQAK--------AKGAMALFGEKYGESVRVITLGDSVELC 695

Query: 184 RGPHVRSTGQVKKFF 198
            G H+ +T ++  F+
Sbjct: 696 GGIHIHNTAEIGSFY 710


>gi|319441431|ref|ZP_07990587.1| prolyl-tRNA synthetase [Corynebacterium variabile DSM 44702]
          Length = 585

 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/160 (23%), Positives = 70/160 (43%), Gaps = 8/160 (5%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK 322
           GV  W   G ++   + + +RR++     +EI  P +L +  +++S  W  Y  ++  +K
Sbjct: 40  GVYSWLPLGLRVLHNIEAIVRREMNAIGAQEIRLPALLPREPYERSNRWTEYGDSLLRLK 99

Query: 323 CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMR 382
             D    D   + L P +      +      SY++ PV L +  + YR+E      G++R
Sbjct: 100 --DRKGAD---YLLGPTHEEMFTDLVKGEYSSYKDFPVTLYQIQTKYRDEER-PRAGILR 153

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIIS-IYKDFGFE 421
            R F   D++ F   +   +E  + H +    I+   G E
Sbjct: 154 GREFIMKDSYSFTMDDAGLDEAYQAHRVAYQRIFDSLGVE 193


>gi|152965404|ref|YP_001361188.1| prolyl-tRNA synthetase [Kineococcus radiotolerans SRS30216]
 gi|189083501|sp|A6W7Y5|SYP_KINRD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|151359921|gb|ABS02924.1| prolyl-tRNA synthetase [Kineococcus radiotolerans SRS30216]
          Length = 586

 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/192 (21%), Positives = 86/192 (44%), Gaps = 19/192 (9%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+E   H+ L R     ++     G+  W   G K+ + +   +R ++     +E++ P 
Sbjct: 19  EAEVASHKLLVRAG---YVRRAAPGIYTWLPLGLKVLRKVEQVVREEMDAAGAQEVHFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L +  ++ +  W  Y   +F +K  D    D        +  P H  +F   +K    S
Sbjct: 76  LLPREPYEATNRWSDYGDGIFKLK--DRKGADY-------LLAPTHEEMFTLLVKDLYSS 126

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH-NLIIS 413
           Y++LP+ + +  + YR+E +    G++R R FT  D++ F   +       ++H    + 
Sbjct: 127 YKDLPLSIYQIQTKYRDE-ARPRAGIIRGREFTMKDSYSFDVDDAGLERSYELHRQAYVR 185

Query: 414 IYKDFGFEKIMV 425
           I++  G + ++V
Sbjct: 186 IFERLGLDFVIV 197


>gi|319948036|ref|ZP_08022210.1| prolyl-tRNA synthetase [Dietzia cinnamea P4]
 gi|319438275|gb|EFV93221.1| prolyl-tRNA synthetase [Dietzia cinnamea P4]
          Length = 581

 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/196 (22%), Positives = 85/196 (43%), Gaps = 19/196 (9%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +  +A    GV  W   G +  + +   +R ++     +EI+ P 
Sbjct: 19  DAEVLSHKLLVRAGYIRRVA---PGVYSWLPLGLRTLRRVEQVVREEMDAFGAQEISLPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L +  ++ +G W  Y   +F +K  D    D+       M  P H  +F   ++    S
Sbjct: 76  LLPREPYETTGRWTEYGPALFRLK--DRKGNDM-------MLGPTHEELFTLTVQGEYSS 126

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH-NLIIS 413
           Y++LPV L +  + YR+E      G++R R F   D++ F   +       + H +    
Sbjct: 127 YKDLPVTLYQIQTKYRDEER-PRAGILRGREFVMKDSYSFDVDDAGLGRSYRAHRDAYQR 185

Query: 414 IYKDFGFEKIMVKLST 429
           I+   G E ++   ++
Sbjct: 186 IFDRLGIEYVICAATS 201


>gi|254474615|ref|ZP_05088001.1| alanyl-tRNA synthetase [Ruegeria sp. R11]
 gi|214028858|gb|EEB69693.1| alanyl-tRNA synthetase [Ruegeria sp. R11]
          Length = 883

 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 80/175 (45%), Gaps = 9/175 (5%)

Query: 33  SLAKKAVAVAIN-GKVCDLSDPVREGSIEIITPEDPRSLAV-IRHSCAHIMAEAVQSIWP 90
           S  KKA  V I+ GKV   S  + +G+   +  +  R  A+   HS  H++ EA++ +  
Sbjct: 520 SDTKKAAGVFIHFGKVE--SGMITKGAAAQLEVDHARRSAIRSNHSATHLLHEALREVLG 577

Query: 91  EVQVAIGPI-IEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKAREL 149
           E     G +  +D   +DF   +  S DE+  +E+++   I ++S    + ++ + AR L
Sbjct: 578 EHVAQRGSLNADDRLRFDFSHNKALSLDEIRTVEQQVNHFIRQNSTVETRIMTPDDARAL 637

Query: 150 FESK--KEAYKVEILESIPAKENVTLYRQGE-W-FDLCRGPHVRSTGQVKKFFKL 200
                  E Y  E+      K      + G+ W  +LC G HV+ TG +  F  L
Sbjct: 638 GAQALFGEKYGDEVRVVSMGKAPTGKGQDGQTWSLELCGGTHVKQTGDIGTFVVL 692


>gi|319407251|emb|CBI80890.1| Prolyl-tRNA synthetase [Bartonella sp. 1-1C]
          Length = 441

 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 73/170 (42%), Gaps = 15/170 (8%)

Query: 231 LTQY-LYFLEESEKR----DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
           L+QY L  L+ES K      HR + R      + +  SG+  W   G K+   +   +R 
Sbjct: 3   LSQYFLPILKESPKEAEVISHRFMLRAG---MVRQQTSGIYSWLPLGKKVLDKICKIIRE 59

Query: 286 -KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
            + +    EI  P +    LW++S  ++ Y   M  ++   D     R     P N    
Sbjct: 60  EQERAGALEILMPTIQSADLWRESERYNDYGLEMLRIRDRQD-----RDLLYGPTNEEMV 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
             +F   ++SY++LP+ L      +R+E      G+MR R F   DA+ F
Sbjct: 115 TDIFRSYVRSYKDLPLNLYHIQWKFRDEIRPRF-GVMRAREFLMKDAYSF 163


>gi|162316930|ref|YP_424303.2| prolyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum
           ATCC 27343]
 gi|114152214|sp|Q2SSG0|SYP_MYCCT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
          Length = 474

 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 76/372 (20%), Positives = 146/372 (39%), Gaps = 60/372 (16%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAV 321
           G + +   G++I++ +  Y+  + K  + + +  P ++ + L+ ++  H D +   +  V
Sbjct: 36  GTMIFRPYGYRIWELIQKYLDEEFKKVNVDNVYFPLLIPESLFNKEKDHIDGFSPEIATV 95

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
                   +   F ++P +    +  F++ + SYR+LP+   ++ +V R E +      +
Sbjct: 96  TRVGQKQLEENLF-IRPTSEVLMMDYFSNEINSYRDLPLIYNQWCNVMRWEKTT--RPFL 152

Query: 382 RVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           R   F   + H V  +  +  N CLKI N+     K+     ++    T  EK       
Sbjct: 153 RTSEFLWQEGHTVHSSYNEAENFCLKILNIYEKFAKEILLLPVICGKKTEKEK------- 205

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAI--GRDWQCGTIQV 498
                                            F G K  Y ++  +  G+  QCGT   
Sbjct: 206 ---------------------------------FAGAKDTYTIESLMFDGQALQCGTSHF 232

Query: 499 -DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPI 553
              N    ++  + N  ++  H    +   +G   R IG +I     +    LP  +SPI
Sbjct: 233 FADNFTKVYDIKFQNKENKLEHA---YSTSWGVSTRLIGALIMTHSDDNGLVLPSKISPI 289

Query: 554 QAIVTTITSSAVEYAQEIANLLKSH--HLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
           Q  +  I ++  E   ++  ++K       I+ D  +++  +KI E  IK IPI I  G 
Sbjct: 290 QVQIIQIKNT--EQIDQVVEIIKDKLSDYRIDVDNSDKSFGFKISEAEIKGIPIRIEIGP 347

Query: 612 KEASERSIGIRR 623
           ++     I I R
Sbjct: 348 RDLENNQITISR 359


>gi|325290366|ref|YP_004266547.1| Prolyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
 gi|324965767|gb|ADY56546.1| Prolyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
          Length = 571

 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 49/103 (47%), Gaps = 6/103 (5%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           +E+  P V    LW+++  WD Y   MF +K   D     R F L P +      +    
Sbjct: 67  QELLLPIVQPSELWKETKRWDIYGPEMFRLKDRHD-----REFCLGPTHEEVITDLVRGE 121

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           ++SY++LP+ L +  + YR+E      GLMR R F   D + F
Sbjct: 122 VRSYKQLPLLLYQIQNKYRDERRPRF-GLMRGREFIMKDLYSF 163


>gi|229496613|ref|ZP_04390327.1| phosphoribulokinase family protein [Porphyromonas endodontalis ATCC
           35406]
 gi|229316510|gb|EEN82429.1| phosphoribulokinase family protein [Porphyromonas endodontalis ATCC
           35406]
          Length = 555

 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 48/90 (53%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDS 134
            + + I+++AV+ + P  ++ +   + +G+Y         +  ELA I  +M EIIA D 
Sbjct: 76  RTLSFILSKAVREVIPTSRLRVEHSLSNGYYCSIKNGHEVTDQELANITIRMDEIIAADL 135

Query: 135 PFLKQYLSHEKARELFESKKEAYKVEILES 164
           PF+ +  S E+A ++F    E  K  +LE+
Sbjct: 136 PFVTRTASQEEAVKVFRDLGEEDKATLLET 165


>gi|260574639|ref|ZP_05842642.1| alanyl-tRNA synthetase [Rhodobacter sp. SW2]
 gi|259023056|gb|EEW26349.1| alanyl-tRNA synthetase [Rhodobacter sp. SW2]
          Length = 882

 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 81/183 (44%), Gaps = 18/183 (9%)

Query: 36  KKAVAVAINGKVCDLSDPVREGSIEIITPE----DPRSLAVIR--HSCAHIMAEAVQSIW 89
           KKA  V I+  V +    V EG I    P     D    A IR  HS  H++ EA++   
Sbjct: 522 KKAAGVVIH--VAE----VTEGQISQGQPAKLEVDHSRRAAIRANHSATHLLNEALRRAL 575

Query: 90  PEVQVAIGPI-IEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE 148
            +     G +   D   +DF   +  +  ELAQ+E ++  +I ++SP   + ++ + AR 
Sbjct: 576 GDHVAQRGSLNAADRLRFDFSHAKGMTPSELAQVEAEVNAVIRQNSPVETRLMTPDDARG 635

Query: 149 LFESK--KEAYKVEI-LESIPAKENVTLYRQGEWF--DLCRGPHVRSTGQVKKFFKLMKV 203
           L       E Y  E+ + S+ A         G+ +  +LC G HV   G++  F  L + 
Sbjct: 636 LGAQALFGEKYGDEVRVVSMGALAGSGKGSDGQTYSLELCGGTHVARLGEIGSFLILSES 695

Query: 204 AGA 206
           A A
Sbjct: 696 ASA 698


>gi|227833360|ref|YP_002835067.1| Prolyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
 gi|262184346|ref|ZP_06043767.1| prolyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
 gi|254782894|sp|C3PH25|SYP_CORA7 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|227454376|gb|ACP33129.1| Prolyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
          Length = 589

 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 79/174 (45%), Gaps = 18/174 (10%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +  +A    GV  W   G +  + +   +R+++     +E+  P 
Sbjct: 19  DAEVPSHKLLVRAGYVRRVA---PGVYTWLPLGLRAMRKIEDVIRQEMNAIGGQEMLFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L +  +++S  W  Y  N+F +K  D    D+       +  P H  +F   +K    S
Sbjct: 76  LLPREPYEESNRWTEYGDNLFRLK--DRKGADM-------LLGPTHEEMFTTAVKDMYSS 126

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
           Y++ PV L +  + YR+E      G++R R FT  D++ F   ++  +E    H
Sbjct: 127 YKDFPVTLYQIQTKYRDEER-PRAGVLRGREFTMKDSYSFDMTDEGLDESYARH 179


>gi|154175003|ref|YP_001408388.1| prolyl-tRNA synthetase [Campylobacter curvus 525.92]
 gi|166980112|sp|A7GYU6|SYP_CAMC5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|112802606|gb|EAT99950.1| prolyl-tRNA synthetase [Campylobacter curvus 525.92]
          Length = 567

 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 6/106 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E++   V    LW+QSG ++ +   +   K  D    D   F L P N    VA+    +
Sbjct: 68  EVSFSVVTSGELWKQSGRFNVFGKELLRFK--DRKEND---FVLSPTNEEAAVALVRGKV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE 398
            SY++LP+ + +  + +R+E      GL+R R FT  DA+ F   E
Sbjct: 123 TSYKQLPLNIYQINTKFRDEARPRF-GLLRGREFTMKDAYSFHANE 167


>gi|300812560|ref|ZP_07092977.1| proline--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
 gi|300496433|gb|EFK31538.1| proline--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
          Length = 565

 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/167 (23%), Positives = 75/167 (44%), Gaps = 8/167 (4%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
           +I +  +GV  +   G+K+ +     +  ++ +    E+  P +L   +W++SG    Y 
Sbjct: 31  YIRQVTAGVYSYLPLGYKVLRKTEKIIEEEMANAGVVEMIMPHMLPASMWEESGRLPKYG 90

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
             MF +K      +  R   L P +      V    LKSY+++P+ L +  + +R+E   
Sbjct: 91  PEMFRLKD-----RHGREMLLGPTHEETFTDVVAKSLKSYKQMPLHLYQIQTKFRDENRP 145

Query: 376 SLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFE 421
              GL+R R F   D + F  ++EQ+  +        + I+K  G E
Sbjct: 146 RF-GLLRGREFVMLDGYSFAASQEQLDKQFDDEKAAYLKIFKRTGVE 191


>gi|91793895|ref|YP_563546.1| prolyl-tRNA synthetase [Shewanella denitrificans OS217]
 gi|123060765|sp|Q12L53|SYP_SHEDO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|91715897|gb|ABE55823.1| prolyl-tRNA synthetase [Shewanella denitrificans OS217]
          Length = 571

 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/148 (23%), Positives = 66/148 (44%), Gaps = 7/148 (4%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I  + SG+  W   G ++ + + + +R ++ K    EI  P V    LW ++G W+ +  
Sbjct: 32  IRRNASGLYSWLPSGLRVLRKVEAIVREEMNKAGAIEILMPLVQPADLWIETGRWEKFGP 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            +   +   +     R F L P +      +    + SY++LP+ L +  + +R+E    
Sbjct: 92  ELLRFQDRHN-----RDFVLGPTHEEVITDLVRKEVSSYKQLPLSLYQIQTKFRDEVRPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             G+MR R F   DA+ F   +   +E 
Sbjct: 147 F-GVMRAREFLMKDAYSFHLDQGTMDET 173


>gi|91786735|ref|YP_547687.1| prolyl-tRNA synthetase [Polaromonas sp. JS666]
 gi|123356060|sp|Q12FA3|SYP_POLSJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|91695960|gb|ABE42789.1| prolyl-tRNA synthetase [Polaromonas sp. JS666]
          Length = 580

 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/134 (23%), Positives = 64/134 (47%), Gaps = 7/134 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           G+G+  +   G ++ + + + +R ++ +    E+  P +     WQ++G ++     +  
Sbjct: 36  GAGIYSYMPMGLRVIRKVEAIVREEMNRAGAVEMTMPVIQPAEFWQETGRFEKMGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +K      +  R F ++P +      V    +KSY++LP  L +  + +R+E      GL
Sbjct: 96  IKD-----RHGRDFVVQPTSEEVITDVMRQDIKSYKQLPKNLYQIQTKFRDERRPRF-GL 149

Query: 381 MRVRGFTQDDAHVF 394
           MR R FT  DA+ F
Sbjct: 150 MRGREFTMKDAYSF 163


>gi|315929558|gb|EFV08748.1| alanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 305]
          Length = 715

 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 61/130 (46%), Gaps = 19/130 (14%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++  A++ I        G ++E +   +DF   +  + +EL  IEK++ ++I   
Sbjct: 422 HSATHLLHHALREILGSHVSQAGSLVESNKLRFDFTHHKALNKEELESIEKRVNKMIINS 481

Query: 134 SPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           S  + + +  E+A++     LF  K +              NV +   GE  +LC G HV
Sbjct: 482 SEAILENMPLEEAKKSGAIALFNEKYQG-------------NVRVLTLGESKELCGGTHV 528

Query: 189 RSTGQVKKFF 198
           ++T Q+  F+
Sbjct: 529 KNTAQIGSFY 538


>gi|228983651|ref|ZP_04143854.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228776089|gb|EEM24452.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 476

 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 83/396 (20%), Positives = 152/396 (38%), Gaps = 61/396 (15%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAV 321
           G +     G+ +++ +   M  K+K   +E +  P  + + L Q +  H + +   +  V
Sbjct: 37  GCMILRPYGYALWENMQKVMDEKLKATGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWV 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
               D  K      ++P +       F+  ++SY +LP    ++ SV R E +      +
Sbjct: 97  THGGDE-KLAERLCIRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKT--TRPFL 153

Query: 382 RVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           R   F   + H +  T E+   E L I NL  S  +D+    ++    T  EK  G+ A 
Sbjct: 154 RTTEFLWQEGHTIHETAEESQAETLNILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKAT 213

Query: 441 WDDAENIMKGVLDTIKNSSQD--RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
           +            TI++   D   + TG     G  +   F+    D  G+ WQ      
Sbjct: 214 Y------------TIESLMHDGKALQTGTSHNFGTNFSEAFDIKFLDRNGK-WQ------ 254

Query: 499 DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQ 554
                                   +H+  +G   R IG +I     N    +P  ++P+Q
Sbjct: 255 -----------------------YVHQTSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQ 291

Query: 555 AIVTTITSSAVEYAQEIANLLKSH---HLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
            ++  I     E     A  L+ H      ++ D  N+T  +K  E+ +K IPI +  G 
Sbjct: 292 VVIVPIAQHK-EGVLAKATELQGHIQKVARVKIDASNKTPGWKFNEYEMKGIPIRLEVGP 350

Query: 612 KEASERSIGIRRFGSTTTQKVS---LLDAIPILTKE 644
           K+  +  + + R  +   + ++   L + IP L +E
Sbjct: 351 KDIEKNQVVLVRRDTKEKEFIAMDQLEERIPALLEE 386


>gi|218884312|ref|YP_002428694.1| prolyl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n]
 gi|218765928|gb|ACL11327.1| prolyl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n]
          Length = 479

 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 75/314 (23%), Positives = 128/314 (40%), Gaps = 65/314 (20%)

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVR---GFTQDDAHVFCTKEQMFNE 403
           ++N  +K  ++LP+++ +  +V+R E +   H ++RVR   GF +  AH   T      E
Sbjct: 121 MWNMWIKGRKDLPLKMYQVVNVFRYE-TKMTHPILRVREIMGFIE--AH---TAHHSREE 174

Query: 404 CLKIHNLIISIYKDFGFEKIMVK---LSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQ 460
             K     I IYK+F F ++ +    + T P         WD                  
Sbjct: 175 AEKQIIEAIGIYKEF-FNRLQLPYFIVKTPP---------WDTFA--------------- 209

Query: 461 DRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF-NAFYVNSHSEKCH 519
                      GA Y   F  ++ D  G+  + G++    NL  +F  AF +        
Sbjct: 210 -----------GAEYNYDFITVMPD--GKGLELGSV---INLGQKFAGAFEIKFMDTDGE 253

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGN-----LPLWLSPIQAIVTTITSSA----VEYAQE 570
              +++  +G  ER +G +I    G+      P  ++PIQ ++  I        +EYA +
Sbjct: 254 EKYVYQTCYGVSERVLGAVI-GIHGDEVGLFFPPEIAPIQVVIVPIMKPGEKEILEYALK 312

Query: 571 IANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           I ++L+SH L +  D   E T  +K     +K +P  I  G +E    ++ I R      
Sbjct: 313 IGSMLESHGLRVFIDSDLEHTPGWKYYYWEMKGVPTRIEVGAREVETSTVTIARRDKREK 372

Query: 630 QKVSLLDAIPILTK 643
           Q V L + +  L K
Sbjct: 373 QVVRLEEVLETLRK 386


>gi|323700409|ref|ZP_08112321.1| prolyl-tRNA synthetase [Desulfovibrio sp. ND132]
 gi|323460341|gb|EGB16206.1| prolyl-tRNA synthetase [Desulfovibrio desulfuricans ND132]
          Length = 580

 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P V    LW+++G WD Y   +   K  +D     R + L P +      +    +
Sbjct: 68  EVLLPTVQPADLWRETGRWDYYGKELLRFKDRND-----RDYCLGPTHEEVITDLVRGEI 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LPV L +  + +R+E      GLMR R F   D + F
Sbjct: 123 KSYKQLPVNLYQVQTKFRDEIRPRF-GLMRGREFIMKDGYSF 163


>gi|312622432|ref|YP_004024045.1| alanyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002]
 gi|312202899|gb|ADQ46226.1| alanyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002]
          Length = 883

 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 80/179 (44%), Gaps = 26/179 (14%)

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           E+ R   +  H+  H++  A++ I  +  Q +   +  D   +DF   +P S ++L +IE
Sbjct: 554 EELRLATMKNHTATHLLHSALRKILGQHAQQSGSQVTPDRLRFDFAHYEPLSEEQLIEIE 613

Query: 124 KKMQEIIARDSPFLKQYLSHEK-----ARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           K +  II +  P  K     +      A  LF+ K                 V + + G+
Sbjct: 614 KMINNIIQQAIPVEKIVTDLDSALRMGATALFDEKYSNV-------------VRVIKIGD 660

Query: 179 W-FDLCRGPHVRSTGQVKKFFKLM---KVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQ 233
           +  +LC G HV +TGQ+   FK++    VA    R ++     +++YG   NTQQ L Q
Sbjct: 661 FSMELCGGTHVDNTGQI-GMFKIISESSVAAGVRRIEAITG--NKVYGFILNTQQTLKQ 716


>gi|288801214|ref|ZP_06406669.1| proline--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039]
 gi|288331825|gb|EFC70308.1| proline--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039]
          Length = 493

 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 63/301 (20%), Positives = 124/301 (41%), Gaps = 56/301 (18%)

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECL 405
            + + +KS+R+LP+   ++ +V R E        +R   F   + H    TKE+   E  
Sbjct: 134 TYKNWIKSWRDLPLMCNQWCNVMRWEMR--TRPFLRTSEFLWQEGHTAHATKEEAVEEAR 191

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
           K+    +S+Y  F  + + V                         VL  +K+ S+     
Sbjct: 192 KM----LSVYATFAEKWMAVP------------------------VLQGVKSESEKFA-- 221

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIH 524
                 GA      E +++D  G+  Q GT   +  N    F+  ++N  ++  +   + 
Sbjct: 222 ------GALDTYTIEAMMQD--GKALQSGTSHFLGQNFAKSFDVTFLNKENKAEY---VW 270

Query: 525 RAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTIT------SSAVEYAQEIANL 574
              +G   R IG +I     +    LP  L+PIQ ++  I       S+  E  Q + + 
Sbjct: 271 ATSWGVSTRLIGALIMTHSDDNGLVLPPKLAPIQVVIIPIAKGEEQLSAITEKLQPVISK 330

Query: 575 LKSHHLSIE-TDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
           L+ + +S++  D  N+   +K  ++ +K +P+ ++ G ++    ++ I R  +   + VS
Sbjct: 331 LRENGISVKFDDSDNKRPGFKFADYELKGVPVRLVMGGRDLESNTVEIMRRDTLEKETVS 390

Query: 634 L 634
           L
Sbjct: 391 L 391


>gi|229083697|ref|ZP_04216020.1| Prolyl-tRNA synthetase 2 [Bacillus cereus Rock3-44]
 gi|228699626|gb|EEL52288.1| Prolyl-tRNA synthetase 2 [Bacillus cereus Rock3-44]
          Length = 476

 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 78/382 (20%), Positives = 146/382 (38%), Gaps = 56/382 (14%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAV 321
           G +     G+ +++ +   M  K+K   +E +  P  + + L Q +  H + +   +  V
Sbjct: 37  GCMILRPYGYALWENIQKVMDEKLKASGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWV 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
               D  K      ++P +       F+  ++SY +LP    ++ SV R E +      +
Sbjct: 97  THGGDE-KLAERLCVRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKT--TRPFL 153

Query: 382 RVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           R   F   + H +  T E+   E L I NL  S  +D+    ++    T  EK  G+ A 
Sbjct: 154 RTTEFLWQEGHTIHETAEESQEETLNILNLYASFCEDYLAIPVIKGQKTDKEKFAGAKAT 213

Query: 441 WDDAENIMKGVLDTIKNSSQD--RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
           +            TI++   D   + TG     G  +   F+    D  G+ WQ      
Sbjct: 214 Y------------TIESLMHDGKALQTGTSHNFGTNFSEAFDIKFLDRNGK-WQ------ 254

Query: 499 DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQ 554
                                   +H+  +G   R IG +I     N    +P  ++P+Q
Sbjct: 255 -----------------------YVHQTSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQ 291

Query: 555 AIVTTITSSAVEYAQEIANLLKSHH--LSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
            I+  I        ++ A L +       ++ D  N+T  +K  E+ +K +PI +  G K
Sbjct: 292 VIIVPIAQHKEGVLEKAAGLQERIQKVARVKIDASNKTPGWKFNEYEMKGVPIRLEVGPK 351

Query: 613 EASERSIGIRRFGSTTTQKVSL 634
           +  +  + + R  +   + VS+
Sbjct: 352 DIEKNQVVLVRRDTKEKEFVSM 373


>gi|302339632|ref|YP_003804838.1| alanyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
 gi|301636817|gb|ADK82244.1| alanyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
          Length = 597

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 79/173 (45%), Gaps = 37/173 (21%)

Query: 32  RSLAKKAVAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE 91
           + L+KK    +  G + D S+               R+ A+  H+  H++ +A++ +  E
Sbjct: 433 QELSKKGAEKSFKGGLADHSE---------------RTTAL--HTATHLLHKALRMVLGE 475

Query: 92  -VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKAR--- 147
            VQ     I  +   +DF   +  S +E+ ++E+ + + I RD P   + +S ++AR   
Sbjct: 476 HVQQKGSNITTERLRFDFVHPEKMSDEEVRRVEEIVNQQIDRDLPVSMEMMSLDEARAAG 535

Query: 148 --ELFESKKEAYKVEILESIPAKENVTLYRQGEWF-DLCRGPHVRSTGQVKKF 197
               FESK               E V +Y  G++  ++C GPHV  TGQ+ +F
Sbjct: 536 ALAFFESK-------------YGEQVKVYSIGDFSKEVCGGPHVEHTGQLGRF 575


>gi|257055068|ref|YP_003132900.1| prolyl-tRNA synthetase [Saccharomonospora viridis DSM 43017]
 gi|256584940|gb|ACU96073.1| prolyl-tRNA synthetase, family II [Saccharomonospora viridis DSM
           43017]
          Length = 586

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/196 (21%), Positives = 88/196 (44%), Gaps = 19/196 (9%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +  +A  G     W   G ++ + + + +R ++     +EI  P 
Sbjct: 19  DAEVPSHKLLVRAGYVRRVAPGGYS---WLPLGLRVLRNVEAIVREEMDAIGAQEIQFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L +  ++ +G W  Y  ++F  +  D    D        +  P H  +F   +K    S
Sbjct: 76  LLPKEPYETTGRWTEYGPSLF--RLVDRKGADY-------LLGPTHEELFALTVKGEYSS 126

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH-NLIIS 413
           Y++ PV L +  + YR+E +    G++R R F   D++ F   ++      ++H N  + 
Sbjct: 127 YKDYPVILYQIQTKYRDE-ARPRAGILRGREFIMKDSYSFDLDDEGLARSYELHRNAYLR 185

Query: 414 IYKDFGFEKIMVKLST 429
           I+   G + ++V  ++
Sbjct: 186 IFDRLGLDYVVVAATS 201


>gi|300113463|ref|YP_003760038.1| prolyl-tRNA synthetase [Nitrosococcus watsonii C-113]
 gi|299539400|gb|ADJ27717.1| prolyl-tRNA synthetase [Nitrosococcus watsonii C-113]
          Length = 574

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/175 (21%), Positives = 75/175 (42%), Gaps = 9/175 (5%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-K 288
           +QYL         D   ++ ++ L    I    +G+  W   G ++ + + + +R ++ K
Sbjct: 4   SQYLLTTTRETPADAEIISHQLMLRGSFIRRLAAGLYTWLPLGLRVLRKVENIIREEMDK 63

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
              +E+  P V    LW+++G W+ Y + +        T +  R F   P +      + 
Sbjct: 64  AGAQEVLMPAVQPAELWRETGRWEQYGSELLRF-----TDRHQRFFCFGPTHEEVITDLI 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE 403
              ++SY++LP    +    +R+E      G+MR R F   DA+ F T +    +
Sbjct: 119 RREIQSYKQLPANFYQIQLKFRDEIRPRF-GVMRSREFLMKDAYSFHTDQTSLGQ 172


>gi|332295560|ref|YP_004437483.1| Prolyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
 gi|332178663|gb|AEE14352.1| Prolyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
          Length = 572

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 6/108 (5%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           +E+  P +  + +W+ SG W  Y   +   K   D     + +AL P +      + N  
Sbjct: 67  QELLLPALQPREIWEISGRWKKYGLELMRFKDRHD-----KDYALGPTHEEVITDLINRE 121

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQ 399
           + SY++LP+ + +  + +R+E      GLMR R F   DA+ F   E+
Sbjct: 122 VNSYKQLPISVFQIQTKFRDEIRPRF-GLMRTREFIMKDAYSFHRNEE 168


>gi|326793278|ref|YP_004311099.1| prolyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
 gi|326544042|gb|ADZ85901.1| prolyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
          Length = 568

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 63/128 (49%), Gaps = 10/128 (7%)

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
           D +E+  P  L   LW++SG +D+  + +  V+  D   KD+    +       H+A   
Sbjct: 65  DGQEVLFPVALPGDLWRESGRFDAVGSEL--VRFKDRGGKDM-VLGMTHEEAAVHLA--R 119

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK----EQMFNECL 405
              KSY   P  + +  + +R+EP  +  GL+RVR FT  DA+ F T     E  + +CL
Sbjct: 120 TEAKSYNNYPFMIYQIQTKFRDEPR-ARGGLIRVREFTMKDAYSFHTSQEDLEAYYEQCL 178

Query: 406 KIHNLIIS 413
           + ++ I +
Sbjct: 179 QAYHRIFA 186


>gi|319404243|emb|CBI77836.1| Prolyl-tRNA synthetase [Bartonella rochalimae ATCC BAA-1498]
          Length = 441

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 73/170 (42%), Gaps = 15/170 (8%)

Query: 231 LTQY-LYFLEESEKR----DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
           L+QY L  L+ES K      HR + R      + +  SG+  W   G K+   +   +R 
Sbjct: 3   LSQYFLPILKESPKEAEVISHRFMLRAG---MVRQQTSGIYSWLPLGKKVLDKICKIIRE 59

Query: 286 -KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
            + +    EI  P +    LW++S  ++ Y   M  ++   D     R     P N    
Sbjct: 60  EQERAGALEILMPTIQSADLWRESERYNDYGLEMLRIRDRQD-----RDLLYGPTNEEMV 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
             +F   ++SY++LP+ L      +R+E      G+MR R F   DA+ F
Sbjct: 115 TDIFRSYVRSYKDLPLNLYHIQWKFRDEIRPRF-GVMRAREFLMKDAYSF 163


>gi|325293275|ref|YP_004279139.1| Alanyl-tRNA synthetase [Agrobacterium sp. H13-3]
 gi|325061128|gb|ADY64819.1| Alanyl-tRNA synthetase [Agrobacterium sp. H13-3]
          Length = 897

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/145 (24%), Positives = 66/145 (45%), Gaps = 12/145 (8%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSS 116
           ++++    D RS     HS  H++ EA++ +        G ++  +   +D    +P S+
Sbjct: 557 AVQLTVDHDRRSRLRANHSATHLLHEALREVLGTHVAQKGSLVAPERLRFDVSHPKPMSA 616

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLS-----HEKARELFESK--KEAYKVEILESIPAKE 169
           +EL  +E+   EI+ ++SP + + +S      E A  LF  K   E   V +   +   +
Sbjct: 617 EELKVVEEMANEIVLQNSPVVTRLMSVDDAIAEGAMALFGEKYGDEVRVVSMGTGVHGAK 676

Query: 170 NVTLYRQGEWFDLCRGPHVRSTGQV 194
               Y      +LC G HV +TGQ+
Sbjct: 677 ANRPYS----VELCGGTHVAATGQI 697


>gi|241957631|ref|XP_002421535.1| proline--trna ligase, putative; prolyl-tRNA synthetase, putative
           [Candida dubliniensis CD36]
 gi|223644879|emb|CAX40877.1| proline--trna ligase, putative [Candida dubliniensis CD36]
          Length = 688

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 88/404 (21%), Positives = 155/404 (38%), Gaps = 63/404 (15%)

Query: 261 DGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH-LWQQSGHWDSYRANM 318
           D SG        + +++T+  +   +IK    +    P  + Q  L ++  H + +   +
Sbjct: 213 DVSGCYILRPNSYFVWETIQDWFNARIKKMGVQNTYFPMFVSQRVLEKEKDHIEGFAPEV 272

Query: 319 FAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLH 378
             V  A ++  D    A++P +       +   ++S+R+LP++L ++ SV R E      
Sbjct: 273 AWVTRAGNSELD-EHIAIRPTSETVMYPYYAKWIRSHRDLPLKLNQWNSVVRWEFKHP-Q 330

Query: 379 GLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGS 437
             +R R F   + H    TK+    E L+I +    +Y++     ++    T  EK  G 
Sbjct: 331 PFLRTREFLWQEGHTAHLTKDAAAEEVLQILDYYAGVYEELLAVPVVKGKKTENEKFAGG 390

Query: 438 DALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI- 496
           D                                    Y    E  +  A GR  Q GT  
Sbjct: 391 D------------------------------------YTTTVEGFVA-ATGRGIQGGTSH 413

Query: 497 QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP---- 552
            +  N    FN    N    +   +  ++  +G   R IG+MI     N  L L P    
Sbjct: 414 HLGTNFSKMFNISVENPEGSEKPRIFAYQNSWGLSTRVIGVMIMTHSDNKGLVLPPRIAQ 473

Query: 553 IQAIVTTI--TSSAV--------EYAQEIANLLKSHHLSIETDFRNETIN--YKIREHSI 600
            QA+V  +  TS +         E A++I   L+++ + +  D+R E  N  +K  +  +
Sbjct: 474 YQAVVIPVGLTSKSTDAQRKEINEGAEKIEQSLRANGIRVTGDYR-EIYNPGWKFADWEL 532

Query: 601 KKIPIIIICGDKEASERSIGI--RRFGSTTTQKVSLLDA-IPIL 641
           K +P+    G K+ +   + I  R  G   T K+  LD  +P L
Sbjct: 533 KGVPLRFEFGPKDLAGNQVTIVRRNDGKKYTVKLDELDTQVPKL 576


>gi|219669716|ref|YP_002460151.1| prolyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
 gi|254782897|sp|B8FR28|SYP_DESHD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|219539976|gb|ACL21715.1| prolyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
          Length = 575

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 73/168 (43%), Gaps = 10/168 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+E   H+ L R      I +  +G+  +   G ++ + +   +R ++     +E+  P 
Sbjct: 17  EAEVVSHQLLVRA---GLIRKSAAGIYTYLPLGLRVLRKIEQIVREEMDAKGGQEVLLPI 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW++SG WD Y   +  +    +     R F L P +      +    ++SY++L
Sbjct: 74  IQPAELWRESGRWDLYGQELMRLNDRHN-----REFCLGPTHEEIITDLIRGEIRSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           P+ L +  + YR+E      GLMR R F   D + F   E    E  K
Sbjct: 129 PLLLYQIQNKYRDERRPRF-GLMRGREFIMKDLYSFDRDEAGLAESYK 175


>gi|86749715|ref|YP_486211.1| prolyl-tRNA synthetase [Rhodopseudomonas palustris HaA2]
 gi|114152241|sp|Q2IWW0|SYP_RHOP2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|86572743|gb|ABD07300.1| prolyl-tRNA synthetase [Rhodopseudomonas palustris HaA2]
          Length = 439

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/202 (22%), Positives = 86/202 (42%), Gaps = 14/202 (6%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTP 297
           +E+E   HR + R   L    ++ +G+  W   G ++ + +   +R  + +    E+  P
Sbjct: 16  KEAEIVSHRLMLRAGML---RQEAAGIYAWLPLGHRVLKKIEQIVREEQNRAGAIELLMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW++SG +D+Y   M  +     + +  R     P N      +F   +KSY+ 
Sbjct: 73  TLQLADLWRESGRYDAYGPEMLRI-----SDRHKRELLYGPTNEEMITEIFRAYVKSYKS 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYK 416
           LP+ L      +R+E      G+MR R F   DA+ F   E    +   ++    +  + 
Sbjct: 128 LPLNLYHIQWKFRDEQRPRF-GVMRGREFLMKDAYSFDVDEAAARKSYNRMFVAYLRTFA 186

Query: 417 DFGFEKIMVKLSTRPEKRVGSD 438
             G + I ++  T P   +G D
Sbjct: 187 RMGLKAIPMRAETGP---IGGD 205


>gi|154148423|ref|YP_001406459.1| prolyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381]
 gi|166980113|sp|A7I1R8|SYP_CAMHC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|153804432|gb|ABS51439.1| prolyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381]
          Length = 569

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/123 (24%), Positives = 57/123 (46%), Gaps = 11/123 (8%)

Query: 277 QTLISYMRRKIKDDYE-----EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
           + +I  ++  IKD+ +     ++N   V     WQ+SG ++ Y   +  +K   +     
Sbjct: 47  EMVIEKIKAVIKDEMDKTGALQVNFSFVTPSEFWQESGRYNVYGKELLRIKDRKEN---- 102

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
             F L P N    V +  + + SY++LP+ + +  + +R+E      GL+R R F   D 
Sbjct: 103 -GFVLSPTNEESSVKMIANKITSYKQLPIHIYQINTKFRDEARPRF-GLLRGREFIMKDG 160

Query: 392 HVF 394
           + F
Sbjct: 161 YSF 163


>gi|283783528|ref|YP_003374282.1| proline--tRNA ligase [Gardnerella vaginalis 409-05]
 gi|283441181|gb|ADB13647.1| proline--tRNA ligase [Gardnerella vaginalis 409-05]
          Length = 610

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 48/191 (25%), Positives = 83/191 (43%), Gaps = 22/191 (11%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
           +I +   GV  W   G K+   + + +R +I     +E++ P +L +  ++ +  W+ Y 
Sbjct: 36  YIRKSAPGVWTWLPLGLKVLNKVQAIIRDEINGIGAQEVHFPALLPREPYEATNRWEEYG 95

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----SYRELPVRLAEFGSVYRN 371
            N+F +K  D    D        +  P H  VF   +K    SY++LPV L +  + YR+
Sbjct: 96  DNIFRLK--DRHQADY-------LLAPTHEEVFTLLVKDMYSSYKDLPVTLYQIQTKYRD 146

Query: 372 E--PSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC-LKIHNLIISIYKDFGFEKIMVKLS 428
           E  P     GL+R R F   D + F   E       ++       I+   G + ++V   
Sbjct: 147 EFRPRA---GLIRGREFIMQDGYSFSIDEDGLKSAYVEERAAYARIFDRLGIKYVIVHAV 203

Query: 429 TRPEKRVGSDA 439
           + P    GSD+
Sbjct: 204 SGPMG--GSDS 212


>gi|326771743|ref|ZP_08231028.1| proline--tRNA ligase [Actinomyces viscosus C505]
 gi|326637876|gb|EGE38777.1| proline--tRNA ligase [Actinomyces viscosus C505]
          Length = 610

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/193 (21%), Positives = 82/193 (42%), Gaps = 19/193 (9%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   HR L R     ++     GV  W   G +  + +   +R+++     +E++ P 
Sbjct: 19  DAEVASHRLLVRAC---YVRRAAPGVYTWLPLGLRTLRKIEDIVRQEMDAMGGQEVHFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L    +Q +G WD Y   +F ++   D    L          P H  +F   +K    S
Sbjct: 76  LLPAEPYQATGRWDDYGPTLFKLRDRKDGDYLL---------APTHEEMFTLAVKDLYSS 126

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH-NLIIS 413
           Y++LP  + +  + YR+E +    G++R R F   D++ F   +       + H +    
Sbjct: 127 YKDLPAVVYQIQTKYRDE-ARPRAGIIRGREFVMKDSYSFDIDDAGLAAAYQAHRDTYER 185

Query: 414 IYKDFGFEKIMVK 426
           I+   G + ++V 
Sbjct: 186 IFTRLGLDYVIVN 198


>gi|50309671|ref|XP_454847.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49643982|emb|CAG99934.1| KLLA0E19801p [Kluyveromyces lactis]
          Length = 549

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 77/170 (45%), Gaps = 16/170 (9%)

Query: 255 LFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHLWQQSGHWDS 313
           L ++ +  SGV+ W   G K  + +   +RR++ +    E++   +  + LW+ +G W  
Sbjct: 29  LGYVKQASSGVLHWLPLGLKTLRNIEGIIRRRMDESGAHEVSLSSLSQRSLWETTGRW-- 86

Query: 314 YRANMFAVKCADDTIKDLRTFALKPMNCPGHVA-VFNHGLKSYRELPVRLAEFGSVYRNE 372
             +N    K  D   KD   + L P  C   +  + N  L SY++LP+   +    YR+E
Sbjct: 87  --SNTELFKLKDAKKKD---YCLVP-TCEEEITWLMNSYLTSYKDLPIIAYQITRKYRDE 140

Query: 373 --PSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFG 419
             P G   GL+R R F   DA+ F    E   +   +++     I+ D G
Sbjct: 141 LRPRG---GLLRGREFLMKDAYSFHLNSEDAVSTFERVNATYDKIFTDIG 187


>gi|57238291|ref|YP_178628.1| alanyl-tRNA synthetase [Campylobacter jejuni RM1221]
 gi|148925880|ref|ZP_01809567.1| alanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8486]
 gi|73621968|sp|Q5HVQ7|SYA_CAMJR RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|57167095|gb|AAW35874.1| alanyl-tRNA synthetase [Campylobacter jejuni RM1221]
 gi|145844866|gb|EDK21970.1| alanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8486]
 gi|315057927|gb|ADT72256.1| Alanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni S3]
          Length = 842

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 61/130 (46%), Gaps = 19/130 (14%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++  A++ I        G ++E +   +DF   +  + +EL  IEK++ ++I   
Sbjct: 549 HSATHLLHHALREILGSHVSQAGSLVESNKLRFDFTHHKALNKEELESIEKRVNKMIINS 608

Query: 134 SPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           S  + + +  E+A++     LF  K +              NV +   GE  +LC G HV
Sbjct: 609 SEAILENMPLEEAKKSGAIALFNEKYQG-------------NVRVLTLGESKELCGGTHV 655

Query: 189 RSTGQVKKFF 198
           ++T Q+  F+
Sbjct: 656 KNTAQIGSFY 665


>gi|86148968|ref|ZP_01067200.1| alanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|88597061|ref|ZP_01100297.1| alanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 84-25]
 gi|218562159|ref|YP_002343938.1| alanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|20532267|sp|Q9PI05|SYA_CAMJE RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|85840326|gb|EAQ57583.1| alanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|88190750|gb|EAQ94723.1| alanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 84-25]
 gi|112359865|emb|CAL34653.1| alanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|315927005|gb|EFV06360.1| alanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           DFVF1099]
          Length = 842

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 61/130 (46%), Gaps = 19/130 (14%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++  A++ I        G ++E +   +DF   +  + +EL  IEK++ ++I   
Sbjct: 549 HSATHLLHHALREILGSHVSQAGSLVESNKLRFDFTHHKALNKEELESIEKRVNKMIINS 608

Query: 134 SPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           S  + + +  E+A++     LF  K +              NV +   GE  +LC G HV
Sbjct: 609 SEAILENMPLEEAKKSGAIALFNEKYQG-------------NVRVLTLGESKELCGGTHV 655

Query: 189 RSTGQVKKFF 198
           ++T Q+  F+
Sbjct: 656 KNTAQIGSFY 665


>gi|284925772|gb|ADC28124.1| alanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni IA3902]
          Length = 842

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 61/130 (46%), Gaps = 19/130 (14%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++  A++ I        G ++E +   +DF   +  + +EL  IEK++ ++I   
Sbjct: 549 HSATHLLHHALREILGSHVSQAGSLVESNKLRFDFTHHKALNKEELESIEKRVNKMIINS 608

Query: 134 SPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           S  + + +  E+A++     LF  K +              NV +   GE  +LC G HV
Sbjct: 609 SEAILENMPLEEAKKSGAIALFNEKYQG-------------NVRVLTLGESKELCGGTHV 655

Query: 189 RSTGQVKKFF 198
           ++T Q+  F+
Sbjct: 656 KNTAQIGSFY 665


>gi|184157474|ref|YP_001845813.1| alanyl-tRNA synthetase [Acinetobacter baumannii ACICU]
 gi|213156272|ref|YP_002318692.1| alanyl-tRNA synthetase [Acinetobacter baumannii AB0057]
 gi|215484078|ref|YP_002326303.1| alanyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
 gi|301346311|ref|ZP_07227052.1| alanyl-tRNA synthetase [Acinetobacter baumannii AB056]
 gi|301510214|ref|ZP_07235451.1| alanyl-tRNA synthetase [Acinetobacter baumannii AB058]
 gi|301596473|ref|ZP_07241481.1| alanyl-tRNA synthetase [Acinetobacter baumannii AB059]
 gi|183209068|gb|ACC56466.1| Alanyl-tRNA synthetase [Acinetobacter baumannii ACICU]
 gi|213055432|gb|ACJ40334.1| alanyl-tRNA synthetase [Acinetobacter baumannii AB0057]
 gi|213985935|gb|ACJ56234.1| alanyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
 gi|322507789|gb|ADX03243.1| alaS [Acinetobacter baumannii 1656-2]
 gi|323517389|gb|ADX91770.1| alanyl-tRNA synthetase [Acinetobacter baumannii TCDC-AB0715]
          Length = 883

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/155 (25%), Positives = 70/155 (45%), Gaps = 15/155 (9%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSS 116
           ++E I   D R      HS  H++  A++ I    VQ     +  D   +DF  +QP S 
Sbjct: 550 NVEAIVKADIREATARNHSATHLLHAALRQILGSHVQQKGSLVASDILRFDFANDQPVSF 609

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESK-KEAYKVEILESIPAKEN 170
           ++L Q+E+ +   I  ++    + L  E A+      LF  K  +  +V  + S+  ++N
Sbjct: 610 EQLQQVERLVNAEIIANTAVTTELLDIETAKAKGAMMLFGEKYGDEVRVLSMGSVIDEKN 669

Query: 171 VTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAG 205
            ++       +LC G HV+ TG +   FK+    G
Sbjct: 670 FSI-------ELCGGIHVKRTGDI-GLFKITSEGG 696


>gi|126735142|ref|ZP_01750888.1| prolyl-tRNA synthetase [Roseobacter sp. CCS2]
 gi|126715697|gb|EBA12562.1| prolyl-tRNA synthetase [Roseobacter sp. CCS2]
          Length = 446

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/183 (22%), Positives = 79/183 (43%), Gaps = 11/183 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  +G+  W   G+K+ + + + +   + +  +  I  P +    LW++SG +D+Y  
Sbjct: 32  IKQASAGIYSWLPLGFKVLRKIENIVHEEQARAGHIAIQMPTIQSADLWRESGRYDAYGE 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  +K      +  R     P        +F   + SY++LP+ L +    +R+E    
Sbjct: 92  EMLRIKD-----RGGRDMLFTPTAEELVTDIFRAHVNSYKDLPLTLYQIQWKFRDEVRPR 146

Query: 377 LHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
             G+MR R F   D + F  TKE   +   +     +  Y+  G + I ++  + P   +
Sbjct: 147 F-GVMRGREFYMKDGYNFDLTKEDALHAYNRHLVSYLRTYERMGLQAIPMRADSGP---I 202

Query: 436 GSD 438
           G D
Sbjct: 203 GGD 205


>gi|124514184|gb|EAY55699.1| Alanyl-tRNA synthetase [Leptospirillum rubarum]
          Length = 891

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 91/206 (44%), Gaps = 21/206 (10%)

Query: 41  VAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPI 99
           + ++G+V      V E +I+    E+ R  +   H+  H++  A++++  E V+ A   +
Sbjct: 532 IVLSGEVVSGKVSVGE-TIDQHVDEEARQGSERHHTATHLLHAALRTVLGEQVRQAGSLV 590

Query: 100 IEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKAREL----FESKKE 155
             +   +DF   QP S + L  +E  +   I R+SP     +   KA ++    F  +K 
Sbjct: 591 APERLRFDFTCPQPVSPENLLAVEALVNGWIFRNSPVDASEMEKSKALDMGALAFFDEKY 650

Query: 156 AYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMK--VAGAYWRGDSN 213
             +V +++ +P          G   +LC G HVRSTGQ+     L +  VA    R ++ 
Sbjct: 651 GDRVRVVQ-VP----------GTSVELCGGTHVRSTGQIGSLLILQETGVAAGIRRIEAV 699

Query: 214 RPMLSRIYGTAWNTQQELTQYLYFLE 239
              L+      W  +QEL      LE
Sbjct: 700 AGPLAYQKAVTW--RQELKDLRELLE 723


>gi|260557541|ref|ZP_05829756.1| alanyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606]
 gi|260409167|gb|EEX02470.1| alanyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606]
          Length = 883

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/155 (25%), Positives = 70/155 (45%), Gaps = 15/155 (9%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSS 116
           ++E I   D R      HS  H++  A++ I    VQ     +  D   +DF  +QP S 
Sbjct: 550 NVEAIVKADIREATARNHSATHLLHAALRQILGSHVQQKGSLVASDILRFDFANDQPVSF 609

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESK-KEAYKVEILESIPAKEN 170
           ++L Q+E+ +   I  ++    + L  E A+      LF  K  +  +V  + S+  ++N
Sbjct: 610 EQLQQVERLVNAEIIANTAVTTELLDIETAKAKGAMMLFGEKYGDEVRVLSMGSVIDEKN 669

Query: 171 VTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAG 205
            ++       +LC G HV+ TG +   FK+    G
Sbjct: 670 FSI-------ELCGGIHVKRTGDI-GLFKITSEGG 696


>gi|205355365|ref|ZP_03222136.1| alanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8421]
 gi|205346599|gb|EDZ33231.1| alanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8421]
          Length = 842

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 61/130 (46%), Gaps = 19/130 (14%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++  A++ I        G ++E +   +DF   +  + +EL  IEK++ ++I   
Sbjct: 549 HSATHLLHHALREILGSHVSQAGSLVESNKLRFDFTHHKALNKEELESIEKRVNKMIINS 608

Query: 134 SPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           S  + + +  E+A++     LF  K +              NV +   GE  +LC G HV
Sbjct: 609 SEAILENMPLEEAKKSGAIALFNEKYQG-------------NVRVLTLGESKELCGGTHV 655

Query: 189 RSTGQVKKFF 198
           ++T Q+  F+
Sbjct: 656 KNTAQIGSFY 665


>gi|146341851|ref|YP_001206899.1| alanyl-tRNA synthetase [Bradyrhizobium sp. ORS278]
 gi|205829995|sp|A4YXQ6|SYA_BRASO RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|146194657|emb|CAL78682.1| alanyl-tRNA synthetase [Bradyrhizobium sp. ORS278]
          Length = 891

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/153 (24%), Positives = 72/153 (47%), Gaps = 13/153 (8%)

Query: 54  VREGSIEIITPED------PRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYY 106
           V +G++++ TP         RS     HS  HI+ EA++ +  +     G ++  D   +
Sbjct: 537 VEQGTLKLGTPLQLDVDHIRRSAIRANHSATHILHEALRQVLGDHIAQRGSLVSPDRLRF 596

Query: 107 DFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEI 161
           DF   +P +++ELA++E    +++  ++    + +  + ARE     LF  +K   +V +
Sbjct: 597 DFVHPKPITAEELARVEDIANDVVLENAEVTTRLMGLDDAREAGARALF-GEKYGDEVRV 655

Query: 162 LESIPAKENVTLYRQGEWFDLCRGPHVRSTGQV 194
           +    A  +      G   +LC G HV+ TG +
Sbjct: 656 VSMGNAARDHGNNAMGWSVELCGGTHVKRTGDI 688


>gi|320528402|ref|ZP_08029564.1| prolyl-tRNA synthetase [Solobacterium moorei F0204]
 gi|320131316|gb|EFW23884.1| prolyl-tRNA synthetase [Solobacterium moorei F0204]
          Length = 561

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/142 (22%), Positives = 68/142 (47%), Gaps = 7/142 (4%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  +GV      G ++   + + +R ++ K D +E++ P ++ + ++  SG    +  
Sbjct: 32  IKKSSAGVYMMLPMGNRVLSKIYAIIRDEMNKIDCQELSMPSLIPEEVYVSSGRRAGFGK 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            MF+++           + L P +           ++SY+++P  L +  + +R+EP   
Sbjct: 92  GMFSLEDRKGV-----PYVLGPTHEELFAMAAKMQIRSYKDMPFSLYQIQTKFRDEPR-P 145

Query: 377 LHGLMRVRGFTQDDAHVFCTKE 398
            +GL+RVR FT  D++ F   E
Sbjct: 146 RYGLIRVREFTMKDSYTFDKDE 167


>gi|158321035|ref|YP_001513542.1| phosphoribulokinase/uridine kinase [Alkaliphilus oremlandii OhILAs]
 gi|158141234|gb|ABW19546.1| phosphoribulokinase/uridine kinase [Alkaliphilus oremlandii OhILAs]
          Length = 558

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/126 (24%), Positives = 66/126 (52%), Gaps = 1/126 (0%)

Query: 72  VIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIA 131
           + + S + +   A   ++   QV++   +  G Y +   ++  + ++  +IE++M+EIIA
Sbjct: 78  IYQRSLSFVFIRACMELFSGCQVSVEHSLSKGLYCEIQYKRDLNEEDTKRIEERMREIIA 137

Query: 132 RDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRST 191
            D P +K  +  ++A ++F+   +  KV +++    K  + +Y+ G   +   G  V ST
Sbjct: 138 EDVPLIKSRVPVDEAIDIFKEYGQNGKVNLMK-YRDKPYINIYQCGWLKNYFYGYMVPST 196

Query: 192 GQVKKF 197
           G +KKF
Sbjct: 197 GYLKKF 202


>gi|77918296|ref|YP_356111.1| prolyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
 gi|114152225|sp|Q3A6R6|SYP_PELCD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|77544379|gb|ABA87941.1| prolyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
          Length = 571

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P V+   LW++SG W+ Y   +       D      +F L P +      +  + +
Sbjct: 68  ELLMPMVVPSELWEESGRWEHYGKELLRFTDRKDA-----SFCLGPTHEEVITDLVRNTV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           +SYR+LP+ L +    +R+E      GLMR R F   DA+ F
Sbjct: 123 RSYRQLPLNLYQIQGKFRDEIRPRF-GLMRGREFIMKDAYSF 163


>gi|47567221|ref|ZP_00237935.1| prolyl-tRNA synthetase [Bacillus cereus G9241]
 gi|206974268|ref|ZP_03235185.1| prolyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217957991|ref|YP_002336535.1| prolyl-tRNA synthetase [Bacillus cereus AH187]
 gi|229137257|ref|ZP_04265874.1| Prolyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST26]
 gi|47556064|gb|EAL14401.1| prolyl-tRNA synthetase [Bacillus cereus G9241]
 gi|206747508|gb|EDZ58898.1| prolyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217066763|gb|ACJ81013.1| prolyl-tRNA synthetase [Bacillus cereus AH187]
 gi|228646252|gb|EEL02469.1| Prolyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST26]
          Length = 476

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 83/396 (20%), Positives = 152/396 (38%), Gaps = 61/396 (15%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAV 321
           G +     G+ +++ +   M  K+K   +E +  P  + + L Q +  H + +   +  V
Sbjct: 37  GCMILRPYGYALWENMQKVMDEKLKATGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWV 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
               D  K      ++P +       F+  ++SY +LP    ++ SV R E +      +
Sbjct: 97  THGGDE-KLAERLCIRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKT--TRPFL 153

Query: 382 RVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           R   F   + H +  T E+   E L I NL  S  +D+    ++    T  EK  G+ A 
Sbjct: 154 RTTEFLWQEGHTIHETAEESQAETLNILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKAT 213

Query: 441 WDDAENIMKGVLDTIKNSSQD--RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
           +            TI++   D   + TG     G  +   F+    D  G+ WQ      
Sbjct: 214 Y------------TIESLMHDGKALQTGTSHNFGTNFSEAFDIKFLDRNGK-WQ------ 254

Query: 499 DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQ 554
                                   +H+  +G   R IG +I     N    +P  ++P+Q
Sbjct: 255 -----------------------YVHQTSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQ 291

Query: 555 AIVTTITSSAVEYAQEIANLLKSH---HLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
            ++  I     E     A  L+ H      ++ D  N+T  +K  E+ +K IPI +  G 
Sbjct: 292 VVIVPIAQHK-EGVLAKATELQGHIQKVARVKIDASNKTPGWKFNEYEMKGIPIRLEVGP 350

Query: 612 KEASERSIGIRRFGSTTTQKVS---LLDAIPILTKE 644
           K+  +  + + R  +   + ++   L + IP L +E
Sbjct: 351 KDIEKNQVVLVRRDTKEKEFIAMDQLEERIPALLEE 386


>gi|307353929|ref|YP_003894980.1| prolyl-tRNA synthetase [Methanoplanus petrolearius DSM 11571]
 gi|307157162|gb|ADN36542.1| prolyl-tRNA synthetase [Methanoplanus petrolearius DSM 11571]
          Length = 477

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 77/382 (20%), Positives = 155/382 (40%), Gaps = 62/382 (16%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQH-LWQQSGHWDSYRANMFAVK 322
           G+  W   G+ I +     +R  +  D+EE   P ++ ++   +++ H   +   ++ V 
Sbjct: 36  GLYVWFPHGFAIRKATYGILRELLDRDHEETLFPLLIPEYEFMKEAEHIKGFEEEVYWVT 95

Query: 323 CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMR 382
               +  D+   AL+P +      ++   ++S+ +LP++L +  + +R E +     L+R
Sbjct: 96  NGGLSKLDV-PLALRPTSETAIYPMYALWVRSHADLPIKLYQIVNTFRYE-TKHTRPLIR 153

Query: 383 VRGFTQ-DDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK--LSTRPEKRVGSDA 439
           +R  T   +AH   T    + E  +     I++YK+F +E++ V   +S RP+       
Sbjct: 154 LREITSFKEAH---TVHATWEEAKEQVEDAIALYKEF-YERLCVPVIMSKRPD------- 202

Query: 440 LWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI-QV 498
            WD                             GA Y    + ++ D  GR  Q GT   +
Sbjct: 203 -WDKF--------------------------PGADYTIAADAVMPD--GRTLQVGTAHHL 233

Query: 499 DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-----LPLWLSPI 553
             N    F   Y + + E+ +     +  +G  ER I  +I +  G+     LP  ++P+
Sbjct: 234 GDNFAKTFEICYEDENGEQQYAF---QTCYGISERCIAALI-SIHGDDKGLVLPPEIAPV 289

Query: 554 QAIVTTI-----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIII 608
           Q ++  I          + A++I   +K+  L ++ D R      K     ++  P+ + 
Sbjct: 290 QVVIVPIIMKKMAEEVTQAAKDIEAEMKAAGLRVKIDDRPLRPGAKYYHWEMRGTPLRLE 349

Query: 609 CGDKEASERSI-GIRRFGSTTT 629
            G ++     +    RFG  T+
Sbjct: 350 IGPRDLENGVVMAADRFGEKTS 371


>gi|169633133|ref|YP_001706869.1| alanyl-tRNA synthetase [Acinetobacter baumannii SDF]
 gi|169151925|emb|CAP00779.1| alanyl-tRNA synthetase [Acinetobacter baumannii]
          Length = 878

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/155 (25%), Positives = 70/155 (45%), Gaps = 15/155 (9%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSS 116
           ++E I   D R      HS  H++  A++ I    VQ     +  D   +DF  +QP S 
Sbjct: 545 NVEAIVKADIREATAHNHSATHLLHAALRQILGSHVQQKGSLVTSDILRFDFANDQPVSF 604

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESK-KEAYKVEILESIPAKEN 170
           ++L Q+E+ +   I  ++    + L  E A+      LF  K  +  +V  + S+  ++N
Sbjct: 605 EQLQQVERLVNAEIIANTAVTTELLDIETAKAKGAMMLFGEKYGDEVRVLSMGSVIDEKN 664

Query: 171 VTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAG 205
            ++       +LC G HV+ TG +   FK+    G
Sbjct: 665 FSI-------ELCGGIHVKRTGDI-GLFKITSEGG 691


>gi|239503494|ref|ZP_04662804.1| alanyl-tRNA synthetase [Acinetobacter baumannii AB900]
          Length = 878

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/155 (25%), Positives = 70/155 (45%), Gaps = 15/155 (9%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSS 116
           ++E I   D R      HS  H++  A++ I    VQ     +  D   +DF  +QP S 
Sbjct: 545 NVEAIVKADIREATARNHSATHLLHAALRQILGSHVQQKGSLVASDILRFDFANDQPVSF 604

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESK-KEAYKVEILESIPAKEN 170
           ++L Q+E+ +   I  ++    + L  E A+      LF  K  +  +V  + S+  ++N
Sbjct: 605 EQLQQVERLVNAEIIANTAVTTELLDIETAKAKGAMMLFGEKYGDEVRVLSMGSVIDEKN 664

Query: 171 VTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAG 205
            ++       +LC G HV+ TG +   FK+    G
Sbjct: 665 FSI-------ELCGGIHVKRTGDI-GLFKITSEGG 691


>gi|296125160|ref|YP_003632412.1| prolyl-tRNA synthetase [Brachyspira murdochii DSM 12563]
 gi|296016976|gb|ADG70213.1| prolyl-tRNA synthetase [Brachyspira murdochii DSM 12563]
          Length = 578

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/131 (24%), Positives = 62/131 (47%), Gaps = 7/131 (5%)

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P ++ + L   SG W+ ++  +F +K  +D        A+ P +         + ++SY+
Sbjct: 72  PILVSKELLTPSGRWERFKKELFRLKDRNDV-----DMAMGPTHEEAFTITAQNEIQSYK 126

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIY 415
           +LP+ L +  + +R+E      G++R + FT  DA+ F  TKE +      +      I+
Sbjct: 127 DLPLTLYQIHTKFRDEIRPRF-GVIRSKEFTMKDAYSFHITKECLDKTYNDMSRAYTKIF 185

Query: 416 KDFGFEKIMVK 426
           K  G + + VK
Sbjct: 186 KRMGLDTVSVK 196


>gi|302340220|ref|YP_003805426.1| prolyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
 gi|301637405|gb|ADK82832.1| prolyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
          Length = 562

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/142 (25%), Positives = 69/142 (48%), Gaps = 7/142 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           G G+  +   G K+ + L   +R ++ +   +E++ P V    +W++SG    +  +   
Sbjct: 36  GHGLYSYLPLGVKVVEKLRKIIREEMDRLGGQEVSVPLVNPADIWKRSGR--EHLIDRAM 93

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           ++ +D   +  R + L P +    V +  +GL+SYR+ PV L +F   +R+E      GL
Sbjct: 94  IRFSD---RSGRRYVLSPSHEEAFVELARYGLRSYRDFPVLLFQFQRKFRDEER-VRQGL 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFN 402
           +R++ F   DA+ F       N
Sbjct: 150 VRLKEFEMKDAYSFHRSATALN 171


>gi|254780870|ref|YP_003065283.1| prolyl-tRNA synthetase [Candidatus Liberibacter asiaticus str.
           psy62]
 gi|254040547|gb|ACT57343.1| prolyl-tRNA synthetase [Candidatus Liberibacter asiaticus str.
           psy62]
          Length = 449

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/183 (24%), Positives = 76/183 (41%), Gaps = 11/183 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +   G+  W   G K    + + +R  + +    E++ P +    LW +SG +DSY  
Sbjct: 32  IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  +   +D     +     P +      +F   +KSYR LP    +    +R+E    
Sbjct: 92  EMLRLADRND-----KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146

Query: 377 LHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
             G+MR R F   DA+ F  T E   +   K+    + I+   G + I ++  + P   +
Sbjct: 147 F-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP---I 202

Query: 436 GSD 438
           G D
Sbjct: 203 GGD 205


>gi|303245636|ref|ZP_07331919.1| alanyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
 gi|302492899|gb|EFL52764.1| alanyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
          Length = 880

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 62/139 (44%), Gaps = 18/139 (12%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKM 126
           R+     H+C H++ +A++++    V  A   +  D   +DF      + DEL+++E ++
Sbjct: 563 RAATARNHTCTHLLHKALKNVLGSHVNQAGSLVTPDRLRFDFTHIAAMTPDELSRVEDEV 622

Query: 127 QEIIARDSPFLKQYLSHEKAR-----ELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
              I  D+P   + L  E AR      LF  +K    V ++E +P          G   +
Sbjct: 623 NAAILLDAPVTTEVLPLEAARAKGATALF-GEKYGDTVRVVE-VP----------GVSME 670

Query: 182 LCRGPHVRSTGQVKKFFKL 200
            C G H+ +TGQ   F  L
Sbjct: 671 FCGGTHLSATGQAGSFLIL 689


>gi|269792643|ref|YP_003317547.1| alanyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM 6589]
 gi|269100278|gb|ACZ19265.1| alanyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM 6589]
          Length = 882

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 63/138 (45%), Gaps = 21/138 (15%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY-YDFDKEQPFSSDELAQIEKKMQEIIARD 133
           H+  HI+ EA+  +        G  + DGF+ +DF+   P S +E+A++E  + ++I  D
Sbjct: 565 HTATHILHEALGRVLGGHVRQSGSWVGDGFFRFDFNHFSPLSDEEIARVEDLVNQVILED 624

Query: 134 SPFLKQYLSHEKARE-----LFESK-KEAYKVEILESIPAKENVTLYRQGEWFDLCRGPH 187
                   S + ARE     LF+ K  +  +V  +E                 +LC G H
Sbjct: 625 RRVTTLETSMDSAREMGAKALFDEKYGQVVRVVSVEGFST-------------ELCGGTH 671

Query: 188 VRSTGQVKKFFKLMKVAG 205
           V S+GQ+   FK+ +  G
Sbjct: 672 VSSSGQI-GLFKIQREEG 688


>gi|320531911|ref|ZP_08032821.1| prolyl-tRNA synthetase [Actinomyces sp. oral taxon 171 str. F0337]
 gi|320135880|gb|EFW27918.1| prolyl-tRNA synthetase [Actinomyces sp. oral taxon 171 str. F0337]
          Length = 610

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/193 (21%), Positives = 82/193 (42%), Gaps = 19/193 (9%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   HR L R     ++     GV  W   G +  + +   +R+++     +E++ P 
Sbjct: 19  DAEVASHRLLVRAC---YVRRAAPGVYTWLPLGLRTLRKIEDIVRQEMDAMGGQEVHFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L    +Q +G WD Y   +F ++   D            +  P H  +F   +K    S
Sbjct: 76  LLPAEPYQATGRWDDYGPTLFKLRDRKDG---------DYLLAPTHEEMFTLAVKDLYSS 126

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH-NLIIS 413
           Y++LP  + +  + YR+E +    G++R R F   D++ F   +       + H +    
Sbjct: 127 YKDLPAIVYQIQTKYRDE-ARPRAGIIRGREFVMKDSYSFDIDDAGLAAAYQAHRDTYER 185

Query: 414 IYKDFGFEKIMVK 426
           I+   G + ++V 
Sbjct: 186 IFTRLGLDYVIVN 198


>gi|169796616|ref|YP_001714409.1| alanyl-tRNA synthetase [Acinetobacter baumannii AYE]
 gi|332853556|ref|ZP_08434820.1| alanine--tRNA ligase [Acinetobacter baumannii 6013150]
 gi|332868421|ref|ZP_08438152.1| alanine--tRNA ligase [Acinetobacter baumannii 6013113]
 gi|332875050|ref|ZP_08442889.1| alanine--tRNA ligase [Acinetobacter baumannii 6014059]
 gi|205829964|sp|B0VAI3|SYA_ACIBY RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|205830054|sp|A3M3W2|SYA_ACIBT RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|205830056|sp|B2HWK7|SYA_ACIBC RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|169149543|emb|CAM87432.1| alanyl-tRNA synthetase [Acinetobacter baumannii AYE]
 gi|193076886|gb|ABO11606.2| alanyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978]
 gi|332728589|gb|EGJ59961.1| alanine--tRNA ligase [Acinetobacter baumannii 6013150]
 gi|332733420|gb|EGJ64603.1| alanine--tRNA ligase [Acinetobacter baumannii 6013113]
 gi|332736750|gb|EGJ67738.1| alanine--tRNA ligase [Acinetobacter baumannii 6014059]
          Length = 878

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/155 (25%), Positives = 70/155 (45%), Gaps = 15/155 (9%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSS 116
           ++E I   D R      HS  H++  A++ I    VQ     +  D   +DF  +QP S 
Sbjct: 545 NVEAIVKADIREATARNHSATHLLHAALRQILGSHVQQKGSLVASDILRFDFANDQPVSF 604

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESK-KEAYKVEILESIPAKEN 170
           ++L Q+E+ +   I  ++    + L  E A+      LF  K  +  +V  + S+  ++N
Sbjct: 605 EQLQQVERLVNAEIIANTAVTTELLDIETAKAKGAMMLFGEKYGDEVRVLSMGSVIDEKN 664

Query: 171 VTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAG 205
            ++       +LC G HV+ TG +   FK+    G
Sbjct: 665 FSI-------ELCGGIHVKRTGDI-GLFKITSEGG 691


>gi|257459695|ref|ZP_05624804.1| prolyl-tRNA synthetase [Campylobacter gracilis RM3268]
 gi|257443120|gb|EEV18254.1| prolyl-tRNA synthetase [Campylobacter gracilis RM3268]
          Length = 572

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 64/138 (46%), Gaps = 7/138 (5%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I + GSG+  +   G  + + + + +R+++     +E++   V     W++SG +  Y  
Sbjct: 32  IEQLGSGLYNFLPLGKIVLERICAVIRQEMDAAGAQEVSFSVVTSADAWKKSGRYAKYGK 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            +   K   D       F L P N    V +    + SY++LP+ + +  + +R+E    
Sbjct: 92  ELLRFKDRKDN-----DFVLSPTNEEAAVLMVADKITSYKQLPLNIYQINTKFRDEARPR 146

Query: 377 LHGLMRVRGFTQDDAHVF 394
             GL+R R FT  DA+ F
Sbjct: 147 F-GLLRGREFTMKDAYSF 163


>gi|150388509|ref|YP_001318558.1| prolyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
 gi|166980095|sp|A6TL31|SYP_ALKMQ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|149948371|gb|ABR46899.1| prolyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
          Length = 570

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 64/138 (46%), Gaps = 7/138 (5%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           +GV  +   G++  + +   +R ++ +   +E     +  + LW+ +G W +    M  +
Sbjct: 37  AGVYSYLPLGYRTLKKVEQIVREEMDRAGAQEALMSALQPKELWEATGRWQAIGPEMMRL 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           K   +     R F L P +      +  + LKSY++LP+ L +  + YR+E      GLM
Sbjct: 97  KDRHN-----REFCLGPTHEEVITDLVKNELKSYKQLPLNLYQIQTKYRDEKRPRF-GLM 150

Query: 382 RVRGFTQDDAHVFCTKEQ 399
           R R F   DA+ F   E+
Sbjct: 151 RSREFIMKDAYSFDKDEE 168


>gi|260433747|ref|ZP_05787718.1| alanyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157]
 gi|260417575|gb|EEX10834.1| alanyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157]
          Length = 890

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/147 (25%), Positives = 64/147 (43%), Gaps = 5/147 (3%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPI-IEDGFYYDFDKEQPFSSD 117
           +E+      RS     HS  H++ EA++    E     G +   D   +DF   +  + +
Sbjct: 551 VELEVDHARRSAIRANHSATHLLHEALRETLGEHVAQRGSLNAADRLRFDFSHTKAMTPE 610

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESK--KEAYKVEILESIPAKENVTLYR 175
           E+  +E+++   I ++SP   + ++ + AR+L       E Y  E+      K       
Sbjct: 611 EIETVEREVNAFIRQNSPVETRIMTPDDARKLGAQALFGEKYGDEVRVVSMGKAPTGKGH 670

Query: 176 QGE-W-FDLCRGPHVRSTGQVKKFFKL 200
            GE W  +LC G HVR TG +  F  L
Sbjct: 671 DGETWSIELCGGTHVRQTGDIGTFVIL 697


>gi|294339022|emb|CAZ87369.1| proline tRNA synthetase [Thiomonas sp. 3As]
          Length = 576

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 60/130 (46%), Gaps = 7/130 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P V    LWQ++G  D +   +  +K   D     R F ++P +      +    +
Sbjct: 68  ELLMPVVQPAELWQETGRLDQFGPELLRIKDRHD-----RDFVIQPTSEEVVTDLVRSEV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI-HNLI 411
           +S+R+LP+      + +R+E      G+MR R FT  DA+ F    +      ++  +  
Sbjct: 123 RSWRQLPLNFYHIQTKFRDERRPRF-GVMRAREFTMKDAYSFDRDFEAAQISYRVMFDAY 181

Query: 412 ISIYKDFGFE 421
           + I++ FGFE
Sbjct: 182 VRIFQRFGFE 191


>gi|283853948|ref|ZP_06371151.1| alanyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
 gi|283570662|gb|EFC18719.1| alanyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
          Length = 880

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 66/143 (46%), Gaps = 20/143 (13%)

Query: 66  DP--RSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           DP  R+     H+  H++ +A++++    V  A   +  D   +DF      + DELA++
Sbjct: 559 DPAVRAATARNHTATHLLHKALKNVLGSHVNQAGSLVTPDRLRFDFTHIAAMTPDELARV 618

Query: 123 EKKMQEIIARDSPFLKQYLSHEKAR-----ELFESKKEAYKVEILESIPAKENVTLYRQG 177
           E ++   I  D+P + + +  + AR      LF  +K   +V ++E +P          G
Sbjct: 619 EDEVNAAILLDAPVVTEVMGIDAARAKGATALF-GEKYGDEVRVVE-VP----------G 666

Query: 178 EWFDLCRGPHVRSTGQVKKFFKL 200
              + C G H+R+TGQ   F  L
Sbjct: 667 VTMEFCGGTHLRATGQAGSFLIL 689


>gi|241204888|ref|YP_002975984.1| alanyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240858778|gb|ACS56445.1| alanyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 884

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 80/184 (43%), Gaps = 25/184 (13%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKM 126
           RS     HS  H++ EA++ +        G ++  +   +D    +P S++EL  +E   
Sbjct: 555 RSRLRANHSATHLLHEALREVLGTHVAQKGSLVAPERLRFDVSHPKPMSAEELKIVEDMA 614

Query: 127 QEIIARDSPFLKQYLS-----HEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF- 180
            EI+ ++SP   + +S      E A  LF    E Y  E+   +   E V   + G+ + 
Sbjct: 615 NEIVLQNSPVTTRLMSVDDAIAEGAMALF---GEKYGDEV-RVVAMGEGVRGAKAGKAYS 670

Query: 181 -DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            +LC G HV +TGQ+     L++V G    G   R    RI      + +E     Y  E
Sbjct: 671 IELCGGTHVGATGQI----GLIRVLGESAVGAGVR----RIEAVTGESARE-----YLAE 717

Query: 240 ESEK 243
           + E+
Sbjct: 718 QDER 721


>gi|255003991|ref|ZP_05278792.1| alanyl-tRNA synthetase [Anaplasma marginale str. Virginia]
          Length = 879

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/156 (23%), Positives = 70/156 (44%), Gaps = 13/156 (8%)

Query: 43  INGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQS-IWPEVQVAIGPIIE 101
           I   V ++ D V + +I++    D R      HS  HI+   +++ I   +Q     + E
Sbjct: 546 ITSGVFNVGDTV-DAAIDV----DRRERLKANHSATHILHSVLRTHIDGNIQQKGSLVAE 600

Query: 102 DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEI 161
           D   +DF+     + +++  IE+++   I  + P L  + S       FE+  +   + +
Sbjct: 601 DKLRFDFNYASALTKEQITLIEREVNRRIMSNKPVLTDHCS-------FEAAVQGGAIAL 653

Query: 162 LESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
                ++ +V +   G+  +LC G HVR TG +  F
Sbjct: 654 FGEKYSEHSVRVVSMGDSKELCGGTHVRYTGDIGAF 689


>gi|34763882|ref|ZP_00144786.1| Prolyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
 gi|27886345|gb|EAA23616.1| Prolyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
          Length = 175

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 7/138 (5%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  SG+  +   G++  + + + +R ++ +    E+  P V    LWQ+SG WD    
Sbjct: 36  IKKLASGIYAYLPLGYRTIKKIENIVREEMDRAGALELLMPVVQPAELWQESGRWDVMGP 95

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  +K   +     R F L P       A+    + SY+ LP+ L    + +R+E    
Sbjct: 96  EMLRLKDRHE-----RDFVLSPTQEEMITAIVRSDISSYKSLPINLYHIQTKFRDERRPR 150

Query: 377 LHGLMRVRGFTQDDAHVF 394
             GLMR RG   +    F
Sbjct: 151 F-GLMRGRGIYYERCLFF 167


>gi|149914370|ref|ZP_01902901.1| prolyl-tRNA synthetase [Roseobacter sp. AzwK-3b]
 gi|149811889|gb|EDM71722.1| prolyl-tRNA synthetase [Roseobacter sp. AzwK-3b]
          Length = 455

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/183 (22%), Positives = 79/183 (43%), Gaps = 11/183 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  +G+  W   G+K+ + L + +   +I+  +  +  P +    LW++SG +D Y  
Sbjct: 32  IKQASAGIYSWLPMGFKVLRKLENIVHEEQIRARHVPMLMPTLQPADLWRESGRYDDYGE 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  +K      +  R     P N      +F   + SY++LP+ L      +R+E    
Sbjct: 92  EMLRIKD-----RQGRDLLYGPTNEELITDIFRSHVGSYKDLPLTLYHIQWKFRDEIRPR 146

Query: 377 LHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
             G+MR R F   D + F  T+E   +   +     +  Y+  G + I ++  + P   +
Sbjct: 147 F-GVMRGREFFMKDGYNFDLTREDALHAYNRHLVSYLRTYERMGLQAIPMRAESGP---I 202

Query: 436 GSD 438
           G D
Sbjct: 203 GGD 205


>gi|126641224|ref|YP_001084208.1| alanyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978]
          Length = 837

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/155 (25%), Positives = 70/155 (45%), Gaps = 15/155 (9%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSS 116
           ++E I   D R      HS  H++  A++ I    VQ     +  D   +DF  +QP S 
Sbjct: 504 NVEAIVKADIREATARNHSATHLLHAALRQILGSHVQQKGSLVASDILRFDFANDQPVSF 563

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESK-KEAYKVEILESIPAKEN 170
           ++L Q+E+ +   I  ++    + L  E A+      LF  K  +  +V  + S+  ++N
Sbjct: 564 EQLQQVERLVNAEIIANTAVTTELLDIETAKAKGAMMLFGEKYGDEVRVLSMGSVIDEKN 623

Query: 171 VTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAG 205
            ++       +LC G HV+ TG +   FK+    G
Sbjct: 624 FSI-------ELCGGIHVKRTGDI-GLFKITSEGG 650


>gi|222474888|ref|YP_002563303.1| alanyl-tRNA synthetase (alaS) [Anaplasma marginale str. Florida]
 gi|255002859|ref|ZP_05277823.1| alanyl-tRNA synthetase [Anaplasma marginale str. Puerto Rico]
 gi|222419024|gb|ACM49047.1| alanyl-tRNA synthetase (alaS) [Anaplasma marginale str. Florida]
          Length = 882

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/156 (23%), Positives = 70/156 (44%), Gaps = 13/156 (8%)

Query: 43  INGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQS-IWPEVQVAIGPIIE 101
           I   V ++ D V + +I++    D R      HS  HI+   +++ I   +Q     + E
Sbjct: 549 ITSGVFNVGDTV-DAAIDV----DRRERLKANHSATHILHSVLRTHIDGNIQQKGSLVAE 603

Query: 102 DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEI 161
           D   +DF+     + +++  IE+++   I  + P L  + S       FE+  +   + +
Sbjct: 604 DKLRFDFNYASALTKEQITLIEREVNRRIMSNKPVLTDHCS-------FEAAVQGGAIAL 656

Query: 162 LESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
                ++ +V +   G+  +LC G HVR TG +  F
Sbjct: 657 FGEKYSEHSVRVVSMGDSKELCGGTHVRYTGDIGAF 692


>gi|170063637|ref|XP_001867188.1| bifunctional aminoacyl-tRNA synthetase [Culex quinquefasciatus]
 gi|167881196|gb|EDS44579.1| bifunctional aminoacyl-tRNA synthetase [Culex quinquefasciatus]
          Length = 1677

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 73/308 (23%), Positives = 116/308 (37%), Gaps = 58/308 (18%)

Query: 334  FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
             A++P +       +   ++SYR+LP+RL ++ +V R E        +R R F   + H 
Sbjct: 1279 IAVRPTSETVMYPAYAKWIQSYRDLPIRLNQWNNVVRWEFKHP-QPFLRTREFLWQEGHT 1337

Query: 394  -FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
             F T+ +   E L+I  L   +Y D     ++    T  EK  G D              
Sbjct: 1338 AFATQAEATEEVLQILELYAQVYTDLLAIPVVRGRKTEKEKFAGGD-------------- 1383

Query: 453  DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYV 511
                        T V     AF           A GR  Q  T   +  N    F+  Y 
Sbjct: 1384 ----------FTTTV----EAFIS---------ASGRAIQGATSHHLGQNFSKMFDIVY- 1419

Query: 512  NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTT--ITSSAV 565
              H E      +++  +G   R IG+MI     N  L L P    IQAI+    IT++  
Sbjct: 1420 -EHPETKEKEYVYQNSWGITTRTIGVMIMVHADNQGLVLPPRVACIQAIIVPCGITANTT 1478

Query: 566  --------EYAQEIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASE 616
                    +  +E+   L    +  E D+R N +  +K     +K +PI +  G K+   
Sbjct: 1479 DEERKTLYDNCKELEAELVKAGVRCEGDYRDNYSPGWKYNHWELKGVPIRVELGFKDLKN 1538

Query: 617  RS-IGIRR 623
            +  + +RR
Sbjct: 1539 KQFVAVRR 1546


>gi|315049859|ref|XP_003174304.1| prolyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
 gi|311342271|gb|EFR01474.1| prolyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
          Length = 631

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 13/129 (10%)

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SG   +  + +F       T      F L P +      + +  +KSYR+LP+R+ +
Sbjct: 119 WKKSGRLHNDDSEVFRFVDRKKT-----PFLLAPTHEEEITTLVSGLIKSYRDLPLRVYQ 173

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI----ISIYKDFGF 420
               YR+EP    HGL+R R F   D + F + E    E +K +N +    IS++K+   
Sbjct: 174 ISRKYRDEPR-PRHGLLRGREFVMKDLYTFDSTE---GEAIKTYNTVKDAYISLFKELKI 229

Query: 421 EKIMVKLST 429
             ++   S+
Sbjct: 230 PYVVASASS 238


>gi|258404449|ref|YP_003197191.1| alanyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
 gi|257796676|gb|ACV67613.1| alanyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
          Length = 880

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/163 (25%), Positives = 76/163 (46%), Gaps = 24/163 (14%)

Query: 54  VREGSI------EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYY 106
           V++GS+      E+I  E  R      H+  H++  A++ +  E V+ A   +  D   +
Sbjct: 543 VKQGSLAVDDEAELIVDEGERVATARNHTVTHLLHAALREVLGEHVKQAGSLVASDRLRF 602

Query: 107 DFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEI 161
           D    Q  +++E+  +E K+ + I  D+P    ++ + +A +     LF  K E  +V +
Sbjct: 603 DLTHIQALTAEEIQAVEDKVNQSILADTPVESAHMDYSQAVQGGAVALFGEKYED-EVRV 661

Query: 162 LESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVA 204
           ++ IP          G   +LC G H+R+TGQ   F  L + A
Sbjct: 662 ID-IP----------GVSRELCGGTHLRATGQAGFFCILSEAA 693


>gi|312134020|ref|YP_004001359.1| pros [Bifidobacterium longum subsp. longum BBMN68]
 gi|311773326|gb|ADQ02814.1| ProS [Bifidobacterium longum subsp. longum BBMN68]
          Length = 604

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 79/180 (43%), Gaps = 16/180 (8%)

Query: 226 NTQQELTQYLYFLEESEKR---DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISY 282
           NT +  T +L  L E       D  KL +     +I +   G+  W   G ++   + + 
Sbjct: 4   NTLRMSTMFLRTLREDPADADVDSAKLLQRAG--YIRKAAPGIWTWLPLGLRVLNKIEAI 61

Query: 283 MRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           +R +I     +E++ P +L +  ++ +  W+ Y  N+F +K   +       + L P + 
Sbjct: 62  IREEINGIGAQEVHFPALLPREPYEATHRWEEYGDNIFRLKDRHEA-----DYLLAPTHE 116

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNE--PSGSLHGLMRVRGFTQDDAHVFCTKEQ 399
                +      SY++LPV L +  + YR+E  P     GL+R R F   DA+ F   E+
Sbjct: 117 EMFTLLVKDMYSSYKDLPVTLYQIQTKYRDEFRPRA---GLIRGREFVMKDAYSFTIDEE 173


>gi|296269038|ref|YP_003651670.1| prolyl-tRNA synthetase [Thermobispora bispora DSM 43833]
 gi|296091825|gb|ADG87777.1| prolyl-tRNA synthetase [Thermobispora bispora DSM 43833]
          Length = 580

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/184 (22%), Positives = 79/184 (42%), Gaps = 11/184 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E   H+ L R   +  +A    GV  W   G  + + +   +R ++ +   +E+  P 
Sbjct: 19  DAELPSHKLLVRAGYIRRVA---PGVYSWLPLGKIVLENIARVVREEMDRMGAQEVLFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++ +G W  Y   +F +K  D    D   + L P +      +    L SY++ 
Sbjct: 76  LLPREYYEATGRWTEYGDTLFRLK--DRKGAD---YLLGPTHEEMFTDMVKGELSSYKDF 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH-NLIISIYKD 417
           PV L +  + YR+E +    GL+R R F   D++ F   +       + H    I I+  
Sbjct: 131 PVTLYQIQTKYRDE-ARPRAGLLRAREFVMKDSYSFDLDDDGLKRSYEAHRETYIRIFDR 189

Query: 418 FGFE 421
            G +
Sbjct: 190 LGLD 193


>gi|288926843|ref|ZP_06420750.1| phosphoribulokinase family protein [Prevotella buccae D17]
 gi|315607075|ref|ZP_07882079.1| phosphoribulokinase [Prevotella buccae ATCC 33574]
 gi|288336368|gb|EFC74747.1| phosphoribulokinase family protein [Prevotella buccae D17]
 gi|315251129|gb|EFU31114.1| phosphoribulokinase [Prevotella buccae ATCC 33574]
          Length = 553

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/118 (26%), Positives = 58/118 (49%), Gaps = 1/118 (0%)

Query: 80  IMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQ 139
           ++++AV  I+   +V I   + +G++ + D        ++  I ++MQEII    P  + 
Sbjct: 82  VLSKAVHDIYRHSEVVIDIPVSNGYFVNLDIGHAVGLQDVDNIRRRMQEIIDAGIPIRRF 141

Query: 140 YLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
            +  E+A  +F  K    KV++LESI      T Y+  ++ D   G  + +T Q+  F
Sbjct: 142 EVPTEEAIRMFREKGADSKVKLLESI-GSLYTTYYQIDDYLDYYYGSLLTNTSQLYLF 198


>gi|239908964|ref|YP_002955706.1| alanyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
 gi|239798831|dbj|BAH77820.1| alanyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
          Length = 880

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/142 (23%), Positives = 65/142 (45%), Gaps = 8/142 (5%)

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWP-EVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           E++     R+     H+C H++ +A++++    V  A   +  D   +DF      +++E
Sbjct: 555 ELVVDAAVRAATARNHTCTHLLHKALKNVLGGHVNQAGSLVTPDRLRFDFSHVSAMTAEE 614

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           LA++E ++   I  D+P + + L  E AR    +     K   +  +     V++     
Sbjct: 615 LARVEDEVNAAILLDAPVVVEELGIEAARAKGATALFGEKYGDVVRVVEVPGVSM----- 669

Query: 179 WFDLCRGPHVRSTGQVKKFFKL 200
             +LC G H+ +TGQ   F+ L
Sbjct: 670 --ELCGGTHIGATGQAGSFYIL 689


>gi|317121850|ref|YP_004101853.1| prolyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885]
 gi|315591830|gb|ADU51126.1| prolyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885]
          Length = 586

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/156 (25%), Positives = 70/156 (44%), Gaps = 10/156 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+E   HR + R   +  +    +G+  W   G +    + + +R ++ +    E+  P 
Sbjct: 17  EAEIASHRLMLRAGLIRRVT---AGIYEWLPLGRRAVAKVEAIVREEMNRKGGLEVGLPI 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    LW+++G W  Y   M+ +K      +  R + L P +      +    + SYR+L
Sbjct: 74  VQPAELWRETGRWAEYGEEMWRLK-----DRHGREYCLGPTHEEIITDLVRATVSSYRQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           P+ L +  + YR+E      G+MR R F   DA+ F
Sbjct: 129 PLLLYQIQNKYRDEIRPRF-GVMRAREFVMKDAYSF 163


>gi|83944501|ref|ZP_00956954.1| alanyl-tRNA synthetase [Sulfitobacter sp. EE-36]
 gi|83844703|gb|EAP82587.1| alanyl-tRNA synthetase [Sulfitobacter sp. EE-36]
          Length = 886

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/132 (24%), Positives = 62/132 (46%), Gaps = 6/132 (4%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPI-IEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++ EA++    +  +  G +   D   +D+    P ++D+LA +E+++   I ++
Sbjct: 563 HSATHLLNEALRKTLGDHVMQRGSLNAADRLRFDYSHNHPMTADQLAAVEEEVNSYIRQN 622

Query: 134 SPFLKQYLSHEKARELFESK--KEAYKVEILESIPAKENVT---LYRQGEWFDLCRGPHV 188
           +    + ++ + ARE+       E Y  E+      +E  +     +Q    +LC G HV
Sbjct: 623 TAVETRIMTPDDAREMGAQALFGEKYGDEVRVVSMGREAGSGKGADKQTYSLELCGGTHV 682

Query: 189 RSTGQVKKFFKL 200
           R TG +  F  L
Sbjct: 683 RQTGDIGAFVLL 694


>gi|302036852|ref|YP_003797174.1| prolyl-tRNA synthetase [Candidatus Nitrospira defluvii]
 gi|190343267|gb|ACE75655.1| prolyl-tRNA synthetase [Candidatus Nitrospira defluvii]
 gi|300604916|emb|CBK41249.1| Prolyl-tRNA synthetase [Candidatus Nitrospira defluvii]
          Length = 543

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/134 (23%), Positives = 62/134 (46%), Gaps = 7/134 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            +G+  +   G ++ + +   +R ++ +   +E+  P      LW+++G WD Y   +  
Sbjct: 11  AAGIYTYLPLGLRVLRKIERIVREEMNRAGAQELLMPVASPAELWRETGRWDFYGKELLR 70

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            K   +     R F L P +      +F   ++SYR++P+   +  + +R+E      GL
Sbjct: 71  FKDRHE-----RDFCLGPTHEEVITDLFRREVRSYRQMPLNFYQIQTKFRDEIRPRF-GL 124

Query: 381 MRVRGFTQDDAHVF 394
           MR R F   DA+ F
Sbjct: 125 MRGREFIMKDAYSF 138


>gi|159044191|ref|YP_001532985.1| alanyl-tRNA synthetase [Dinoroseobacter shibae DFL 12]
 gi|205830080|sp|A8LL20|SYA_DINSH RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|157911951|gb|ABV93384.1| alanyl-tRNA synthase [Dinoroseobacter shibae DFL 12]
          Length = 887

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/166 (24%), Positives = 77/166 (46%), Gaps = 7/166 (4%)

Query: 46  KVCDLSDPVREGSIEIITPEDPRSLAV-IRHSCAHIMAEAV-QSIWPEVQVAIGPIIEDG 103
           KV   + P++ G +  +  +  R  A+   HS  H++ EA+ Q++   V         D 
Sbjct: 533 KVTPKAQPLKAGDVLEMRVDPARRTAIRANHSATHLLHEALRQALGAHVAQRGSLNAADR 592

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESK--KEAYKVEI 161
             +DF   +  + +EL ++E ++   I ++SP   + ++ + AR+L       E Y  E+
Sbjct: 593 LRFDFSHSKALTLEELQKVEAEVNAYIRQNSPVETRIMTPDAARDLGAQALFGEKYGDEV 652

Query: 162 -LESIPAKENVTLYRQGEWF--DLCRGPHVRSTGQVKKFFKLMKVA 204
            + S+  +        GE +  +LC G HV+ TG +  F  + + A
Sbjct: 653 RVVSMGRQSGSGKGVSGETYSLELCGGTHVKQTGDIGVFVTVGETA 698


>gi|298291828|ref|YP_003693767.1| prolyl-tRNA synthetase [Starkeya novella DSM 506]
 gi|296928339|gb|ADH89148.1| prolyl-tRNA synthetase [Starkeya novella DSM 506]
          Length = 440

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/155 (25%), Positives = 68/155 (43%), Gaps = 10/155 (6%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTP 297
           +E+E   HR + R      I ++ +G+  W   G ++   + + +R  + +    EI  P
Sbjct: 16  KEAEIVSHRLMLRAG---MIRQESAGIYAWLPLGKRVLDKICNVVREEQNRSGAIEILMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW++SG +D Y   M  +K   +     R     P N      +    +KSY++
Sbjct: 73  TIQSADLWRESGRYDDYGKEMLRIKDRHE-----RDMLFGPTNEEMLTEIVRAYVKSYKD 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
           LP+ L      +R+E      G+MR R F   DA+
Sbjct: 128 LPLNLYHIQWKFRDEVRPRF-GVMRSREFLMKDAY 161


>gi|320449491|ref|YP_004201587.1| alanyl-tRNA synthetase [Thermus scotoductus SA-01]
 gi|320149660|gb|ADW21038.1| alanyl-tRNA synthetase [Thermus scotoductus SA-01]
          Length = 882

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 50/193 (25%), Positives = 80/193 (41%), Gaps = 30/193 (15%)

Query: 75  HSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           H+  H++  A++++  P V+ A   +  D   +DF   +P + +EL +IE  +   I  D
Sbjct: 576 HTATHLLHAALRAVLGPHVRQAGSLVAPDRLRFDFTHPEPLTQEELERIELLVNRWILAD 635

Query: 134 SPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
            P   +YL  E+A+      LF  K       +         V      E  +LC G HV
Sbjct: 636 FPVTWRYLPLEEAKREGAMALFGEKYGEVVRVVRVEGSPLPGV------ESKELCGGTHV 689

Query: 189 RSTGQVKKFF------------KLMKVAGA----YWRGDSN--RPMLSRIYGTAWNTQQE 230
           R TG++  F             +L  VAG     + RG  N  R +  R+     N ++ 
Sbjct: 690 RRTGEIGAFLIQKEEAVSAGVRRLEAVAGEWAVRFARGALNRMRALAERLSVGEANLEER 749

Query: 231 LTQYLYFLEESEK 243
           L + L  L+  EK
Sbjct: 750 LERLLQELKAKEK 762


>gi|296135005|ref|YP_003642247.1| prolyl-tRNA synthetase [Thiomonas intermedia K12]
 gi|295795127|gb|ADG29917.1| prolyl-tRNA synthetase [Thiomonas intermedia K12]
          Length = 576

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 60/130 (46%), Gaps = 7/130 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P V    LWQ++G  D +   +  +K   D     R F ++P +      +    +
Sbjct: 68  ELLMPVVQPAELWQETGRLDQFGPELLRIKDRHD-----RDFVIQPTSEEVVTDLVRSEV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI-HNLI 411
           +S+R+LP+      + +R+E      G+MR R FT  DA+ F    +      ++  +  
Sbjct: 123 RSWRQLPLNFYHIQTKFRDERRPRF-GVMRAREFTMKDAYSFDRDFEAAQISYRVMFDAY 181

Query: 412 ISIYKDFGFE 421
           + I++ FGFE
Sbjct: 182 VRIFQRFGFE 191


>gi|315226277|ref|ZP_07868065.1| proline--tRNA ligase [Parascardovia denticolens DSM 10105]
 gi|315120409|gb|EFT83541.1| proline--tRNA ligase [Parascardovia denticolens DSM 10105]
          Length = 590

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 19/150 (12%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
           +I + G G+  W   G K+   + + +R +I     +E++ P ++ +  +Q S  W+ Y 
Sbjct: 29  YIRKIGPGLYSWLPLGLKVLNKIEAIIREEINALGAQEVHFPAMMPREPYQMSNRWEEYG 88

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----SYRELPVRLAEFGSVYRN 371
            N+F  K  D    D        +  P H  +F   +K    SY++LPV L +    YR+
Sbjct: 89  DNIFRFK--DRHGADY-------LLAPTHEEMFTLMVKDMYTSYKDLPVTLYQIQGKYRD 139

Query: 372 E--PSGSLHGLMRVRGFTQDDAHVFCTKEQ 399
           E  P     G++R R F   DA+ F   E+
Sbjct: 140 EFRPRA---GMIRGRQFVMKDAYSFDIDEE 166


>gi|260430967|ref|ZP_05784938.1| prolyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157]
 gi|260414795|gb|EEX08054.1| prolyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157]
          Length = 446

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/183 (23%), Positives = 79/183 (43%), Gaps = 11/183 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  +G+  W   G+K+ + L + +   +I+  +  I  P +    LW++SG +D Y  
Sbjct: 32  IKQAAAGIYSWLPLGFKVLRKLENIVHEEQIRAGHIPIQMPILQSADLWRESGRYDDYGQ 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  +K      +  R     P        +F   + SY++LP+ L +    +R+E    
Sbjct: 92  EMLRMKD-----RHGRDMLYTPTAEELVTDIFRGHVSSYKDLPLTLYQIQWKFRDEIRPR 146

Query: 377 LHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
             G+MR R F   D + F  TKE   +   +     +  Y+  G + I ++  + P   +
Sbjct: 147 F-GVMRGREFYMKDGYNFDLTKEDALHAYNRHLVSYLRTYERMGLQAIPMRADSGP---I 202

Query: 436 GSD 438
           G D
Sbjct: 203 GGD 205


>gi|119717421|ref|YP_924386.1| prolyl-tRNA synthetase [Nocardioides sp. JS614]
 gi|152112937|sp|A1SLL4|SYP_NOCSJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|119538082|gb|ABL82699.1| prolyl-tRNA synthetase [Nocardioides sp. JS614]
          Length = 589

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/192 (21%), Positives = 85/192 (44%), Gaps = 17/192 (8%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   HR L R     +I     G+  W   G ++ + + + +R ++     +E+  P 
Sbjct: 19  DAEVPSHRLLVRAG---YIRRAAPGIYTWLPLGLRVLRKIENVIREEMDAIGAQEMLFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAV---KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           +L +  ++ +  W  Y   +F +   K AD        + L P +      V      SY
Sbjct: 76  LLPREPYEATNRWTEYGDGIFRLQDRKGAD--------YLLGPTHEEMFTLVVKDLYSSY 127

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH-NLIISI 414
           ++LP+ + +  + YR+E +    GL+R R F   D++ F   +   +   + H +  + I
Sbjct: 128 KDLPLSIYQIQTKYRDE-ARPRAGLLRGREFVMKDSYSFDVDDAGLDVSYQKHRDAYVRI 186

Query: 415 YKDFGFEKIMVK 426
           +   GFE ++V+
Sbjct: 187 FDRLGFEYVIVE 198


>gi|302678395|ref|XP_003028880.1| hypothetical protein SCHCODRAFT_236922 [Schizophyllum commune H4-8]
 gi|300102569|gb|EFI93977.1| hypothetical protein SCHCODRAFT_236922 [Schizophyllum commune H4-8]
          Length = 706

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 68/310 (21%), Positives = 120/310 (38%), Gaps = 59/310 (19%)

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
            A++P +       ++  ++S+R+LP++L ++ SV R E   +    +R R F   + H 
Sbjct: 304 IAIRPTSETAMYPYYSKWIQSHRDLPLKLNQWNSVVRWE-FKNPQPFLRTREFLWQEGHT 362

Query: 394 -FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
            F TK +   E  +I +L   IY+D     ++  + +  EK                   
Sbjct: 363 AFLTKPEADAEVRQILDLYRQIYEDLLAVPVIPGIKSEKEKFA----------------- 405

Query: 453 DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGT---IQVDFNLPSRFNAF 509
                              G  Y    E  +  + GR  Q  T   +  +F+ P  FN  
Sbjct: 406 -------------------GGLYTTTIEGFIPTS-GRGIQAATSHCLGQNFSRPEMFN-I 444

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTTITSSAV 565
            V   S+    + + +  +G   R IG+M+     N  L L P    IQA++      A 
Sbjct: 445 SVEDPSKPNEKLYVWQNSWGLSTRTIGVMVMVHGDNQGLVLPPRVASIQAVIVPCGIKAG 504

Query: 566 EYAQE----------IANLLKSHHLSIETDFRN-ETINYKIREHSIKKIPIIIICGDKEA 614
              +E          IA  L+   +  + D R+  T  YK  +   K +P+ +  G K+ 
Sbjct: 505 ASDEERKSINDKCEAIAQELRDGGVRAKADLRDIYTPGYKFNDWEQKGVPLRLEIGPKDL 564

Query: 615 SERS-IGIRR 623
            ++S + +RR
Sbjct: 565 EKKSTLTVRR 574


>gi|288927362|ref|ZP_06421209.1| tRNA ligase [Prevotella sp. oral taxon 317 str. F0108]
 gi|288330196|gb|EFC68780.1| tRNA ligase [Prevotella sp. oral taxon 317 str. F0108]
          Length = 872

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/176 (26%), Positives = 78/176 (44%), Gaps = 25/176 (14%)

Query: 40  AVAINGK-VCDLSDPVREG--SIEIIT--PEDP------------RSLAVIRHSCAHIMA 82
            V +NG+   D+ D  RE   SI I+   P+DP            R  +   H+  H++ 
Sbjct: 510 GVLVNGEETVDIIDTKRENNQSIHIVKALPKDPKADFMACVDTDKREASAANHTATHLLD 569

Query: 83  EAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYL 141
            A++++  E     G ++  D   +DF   Q  + +EL ++E+ + ++I +D P     L
Sbjct: 570 YALKAVLGEHVEQKGSLVAPDTLRFDFSHFQKVTDEELREVERLVNDLIRQDLP-----L 624

Query: 142 SHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
              +   L E+K  A     L      + V + R G   + C G H RSTG++  F
Sbjct: 625 DEHRNTPLEEAK--AMGAVALFGEKYGDTVRVVRFGPSCEFCGGIHARSTGRIGMF 678


>gi|189440768|ref|YP_001955849.1| prolyl-tRNA synthetase [Bifidobacterium longum DJO10A]
 gi|189429203|gb|ACD99351.1| Prolyl-tRNA synthetase [Bifidobacterium longum DJO10A]
          Length = 604

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 79/180 (43%), Gaps = 16/180 (8%)

Query: 226 NTQQELTQYLYFLEESEKR---DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISY 282
           NT +  T +L  L E       D  KL +     +I +   G+  W   G ++   + + 
Sbjct: 4   NTLRMSTMFLRTLREDPADADVDSAKLLQRAG--YIRKAAPGIWTWLPLGLRVLNKIEAI 61

Query: 283 MRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           +R +I     +E++ P +L +  ++ +  W+ Y  N+F +K   +       + L P + 
Sbjct: 62  IREEINGIGAQEVHFPALLPREPYEATHRWEEYGDNIFRLKDRHEA-----DYLLAPTHE 116

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNE--PSGSLHGLMRVRGFTQDDAHVFCTKEQ 399
                +      SY++LPV L +  + YR+E  P     GL+R R F   DA+ F   E+
Sbjct: 117 EMFTLLVKDMYSSYKDLPVTLYQIQTKYRDEFRPRA---GLIRGREFVMKDAYSFTIDEE 173


>gi|90413553|ref|ZP_01221544.1| prolyl-tRNA synthetase [Photobacterium profundum 3TCK]
 gi|90325485|gb|EAS41968.1| prolyl-tRNA synthetase [Photobacterium profundum 3TCK]
          Length = 571

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/162 (24%), Positives = 73/162 (45%), Gaps = 8/162 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R++I +    EI  P V    LW+++G     R+    
Sbjct: 36  ASGLYTWLPTGLRVLRKVENIVRQEIDNAGAVEILMPVVQPFELWEETG-----RSEKMG 90

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +    T +  R F L P       ++  + + SY++LP+ L +  + +R+E      G+
Sbjct: 91  PELLRFTDRHSRPFVLSPTAEEVVTSLVRNEISSYKQLPLNLYQIQTKFRDERRPRF-GV 149

Query: 381 MRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFE 421
           MR R F+  DA+ F   KE +      +H+     +   G E
Sbjct: 150 MRAREFSMMDAYSFDIDKEGLEKSYQAMHDAYCKAFDRMGLE 191


>gi|307212509|gb|EFN88240.1| 39S ribosomal protein L39, mitochondrial [Harpegnathos saltator]
          Length = 310

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 55/243 (22%), Positives = 106/243 (43%), Gaps = 28/243 (11%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIR---HS 76
           +T  D A+ IS S+ K +    ++G++ D+  P      ++++T + PRS  +      +
Sbjct: 52  STPHDCAKHISESITKMSAIAFVDGQIWDMHKPFTGNCELQLVTMQTPRSGMINNAFWRT 111

Query: 77  CAHIMAEAVQSIWPE-VQVAIG----PIIEDG-FYYDFDKEQPF---SSDELAQIEKKMQ 127
           C+ I+    ++ + + V V +     P+I  G F YD   + P    +  EL  +     
Sbjct: 112 CSLILGAVAENAFKDNVNVHLHSFPYPVIRSGSFVYDVFIDLPSWQPTDSELRAMSALFV 171

Query: 128 EIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIP--AKEN----VTLYRQGEWFD 181
           + I R+    +  +    A+ +FE     Y     + IP  AK+N    VTLY+ G+  D
Sbjct: 172 KFINRELLLERLEVPCSIAQHMFEDNPFKY-----QQIPQIAKDNDDDKVTLYQLGDHID 226

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           + +GP + ++G + +    + V   +   +     L R  G A      L  + Y + E+
Sbjct: 227 ISKGPMISNSGLIGR----VTVTAVHRLTNGPVDGLYRFQGVALPKGIMLNHFAYSILEN 282

Query: 242 EKR 244
             +
Sbjct: 283 RAK 285


>gi|163745976|ref|ZP_02153335.1| prolyl-tRNA synthetase [Oceanibulbus indolifex HEL-45]
 gi|161380721|gb|EDQ05131.1| prolyl-tRNA synthetase [Oceanibulbus indolifex HEL-45]
          Length = 446

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/183 (22%), Positives = 79/183 (43%), Gaps = 11/183 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  +G+  W   G+K+ + +   + + + +  +  +  P +    LW++SG +D+Y  
Sbjct: 32  IKQSSAGIYSWLPLGYKVLRKVEEIVHQEQQRVGHIPMLMPTLQSADLWKESGRYDAYGP 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  ++   D     R     P N      +F   + SY++LP+ L      +R+E    
Sbjct: 92  EMLRIRDRQD-----RDMLYGPTNEEMITDIFRSHVGSYKDLPLTLYHIQWKFRDEIRPR 146

Query: 377 LHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
             G+MR R F   D + F  TKE   +   +     +  Y+  G + I ++  + P   +
Sbjct: 147 F-GVMRGREFLMKDGYNFDLTKEDALHAYNRHLVSYLRTYERMGLQAIPMRADSGP---I 202

Query: 436 GSD 438
           G D
Sbjct: 203 GGD 205


>gi|27904721|ref|NP_777847.1| prolyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
 gi|46396631|sp|Q89AN7|SYP_BUCBP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|27904118|gb|AAO26952.1| prolyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
          Length = 574

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 65/138 (47%), Gaps = 7/138 (5%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I ++ SG   W   G +I + +I  ++ ++K     EI  P +  ++LW  S    +Y  
Sbjct: 32  IRQNTSGTYIWLPTGLRILKKVIRIIKNEMKQCGAMEIAMPFLQKKNLWDLSKRVITYGQ 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            +F V     T +  + F L P +         + L+SY++LP+ L +  + +R+E    
Sbjct: 92  ELFQV-----TDRTNKKFILGPTHEEMITYFIKNELQSYKQLPLILYQIQTKFRDEIRPR 146

Query: 377 LHGLMRVRGFTQDDAHVF 394
             G++R + F   DA+ F
Sbjct: 147 F-GIIRTKEFMMKDAYSF 163


>gi|194751137|ref|XP_001957883.1| GF10636 [Drosophila ananassae]
 gi|190625165|gb|EDV40689.1| GF10636 [Drosophila ananassae]
          Length = 333

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 123/263 (46%), Gaps = 33/263 (12%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVC-DLSDPVREG-S 58
           +P D+ L   + +I      +T  + A+ +S    +++    I+G V  D+  P++E  +
Sbjct: 65  LPEDVTLVM-NANI------STPYNCAQHLSEGHKRRSALALIDGSVPWDMHRPLQESCT 117

Query: 59  IEIITPEDPRSLAVIR---HSCAHIMAEAVQSIW-PEVQVAI----GPIIEDG-FYYDFD 109
           ++++  +      V +    +C+ ++  A+   + PE  + +    GP I+ G F +D  
Sbjct: 118 LQLLHFQVSEPHVVNKAFWRTCSFMLGAALNRAFKPEANLQLHSFPGPNIKSGSFVHDIV 177

Query: 110 KE----QPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESI 165
            +    QP + +E+  +  +M ++   D    +  ++ + A+E+F+  K  YK E L SI
Sbjct: 178 LQTRNWQP-TKEEMRTVSAEMVKLALEDHEIERLDVTQDIAQEIFKDSK--YKSEQLPSI 234

Query: 166 PAKEN--VTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRP-MLSRIYG 222
             + +  VTLYR G+  D+ RGP V +T    +F     ++ A+   D        RI G
Sbjct: 235 AQQTHGRVTLYRLGDHIDISRGPMVGAT----RFLGKCTISAAHKVADEGETDGFYRIQG 290

Query: 223 TAWNTQQELTQYLY-FLEESEKR 244
            A  +  +L    +  LEE  K+
Sbjct: 291 VALPSGIQLNHVAFGVLEERSKK 313


>gi|78047331|ref|YP_363506.1| alanyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria str.
           85-10]
 gi|123585336|sp|Q3BUQ7|SYA_XANC5 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|78035761|emb|CAJ23452.1| Alanyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria str.
           85-10]
          Length = 882

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 48/200 (24%), Positives = 81/200 (40%), Gaps = 28/200 (14%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKM 126
           R   ++ HS  H++  A++ +    VQ     +  D   +DF   QPF++DELA IE+K+
Sbjct: 563 RGKTILNHSATHLLHAALREVLGTHVQQKGSLVAPDRLRFDFSHFQPFTADELAVIERKV 622

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRG 185
              +  +       ++ ++A +        +    L      ENV + + G +  +LC G
Sbjct: 623 NAEVRANHGVEVHNMAMQEALD--------FGAMALFGEKYGENVRVLKMGGYSTELCGG 674

Query: 186 PHVRSTGQVKKFFKLMKVAGAY----------------WRGDSNRPMLSRIYGTAWNTQQ 229
            HV  TG +   FK+    G                  +  D  R +L        NT  
Sbjct: 675 THVTRTGDI-GLFKITSEGGVSSGVRRIEAVTGQGALDYVADEERRLLEAANLLGGNT-S 732

Query: 230 ELTQYLYFLEESEKRDHRKL 249
           E+   +  L E +KR  R+L
Sbjct: 733 EVVDKVRALTERQKRLEREL 752


>gi|294786669|ref|ZP_06751923.1| proline--tRNA ligase [Parascardovia denticolens F0305]
 gi|294485502|gb|EFG33136.1| proline--tRNA ligase [Parascardovia denticolens F0305]
          Length = 601

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 19/150 (12%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
           +I + G G+  W   G K+   + + +R +I     +E++ P ++ +  +Q S  W+ Y 
Sbjct: 40  YIRKIGPGLYSWLPLGLKVLNKIEAIIREEINALGAQEVHFPAMMPREPYQMSNRWEEYG 99

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----SYRELPVRLAEFGSVYRN 371
            N+F  K  D    D        +  P H  +F   +K    SY++LPV L +    YR+
Sbjct: 100 DNIFRFK--DRHGADY-------LLAPTHEEMFTLMVKDMYTSYKDLPVTLYQIQGKYRD 150

Query: 372 E--PSGSLHGLMRVRGFTQDDAHVFCTKEQ 399
           E  P     G++R R F   DA+ F   E+
Sbjct: 151 EFRPRA---GMIRGRQFVMKDAYSFDIDEE 177


>gi|256379843|ref|YP_003103503.1| prolyl-tRNA synthetase [Actinosynnema mirum DSM 43827]
 gi|255924146|gb|ACU39657.1| prolyl-tRNA synthetase [Actinosynnema mirum DSM 43827]
          Length = 581

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 44/196 (22%), Positives = 86/196 (43%), Gaps = 19/196 (9%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +  +A  G     W   G ++ + +   +R ++     +EI  P 
Sbjct: 19  DAEVPSHKLLVRAGYVRRVAPGGYS---WLPLGLRVLRNIERVVREEMDAIGAQEIQFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L +  ++ +  W  Y  N+F +K  D    D        +  P H  +F   +K    S
Sbjct: 76  LLPKEPYEATNRWTEYGPNIFRLK--DRKGADY-------LLGPTHEELFALTVKGEYSS 126

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI-IS 413
           Y++ PV L +  + YR+E +    G++R R F   D++ F   ++   E  + H    I 
Sbjct: 127 YKDYPVALYQIQTKYRDE-ARPRAGILRGREFVMKDSYSFDLTDEGLAEAYQRHRAAYIK 185

Query: 414 IYKDFGFEKIMVKLST 429
           I+   G + ++V  ++
Sbjct: 186 IFDRLGMDYVIVSATS 201


>gi|218710332|ref|YP_002417953.1| prolyl-tRNA synthetase [Vibrio splendidus LGP32]
 gi|254782926|sp|B7VIT2|SYP_VIBSL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|218323351|emb|CAV19528.1| prolyl-tRNA synthetase [Vibrio splendidus LGP32]
          Length = 571

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/162 (24%), Positives = 73/162 (45%), Gaps = 8/162 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R++I +    EI  P V    LW+++G     R+    
Sbjct: 36  ASGLYTWLPTGLRVLRKVENIVRQEIDNAGAVEILMPVVQPFELWEETG-----RSEKMG 90

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +    T +  R F L P       ++  + + SY++LP+ L +  + +R+E      G+
Sbjct: 91  PELLRFTDRHSRPFVLSPTAEEVVTSLVRNEISSYKQLPLNLYQIQTKFRDERRPRF-GV 149

Query: 381 MRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFE 421
           MR R F+  DA+ F   KE +      +H+     +   G E
Sbjct: 150 MRAREFSMMDAYSFDIDKEGLEKSYQAMHDAYCKAFDRMGLE 191


>gi|317484483|ref|ZP_07943393.1| tRNA synthetase class II [Bilophila wadsworthia 3_1_6]
 gi|316924259|gb|EFV45435.1| tRNA synthetase class II [Bilophila wadsworthia 3_1_6]
          Length = 884

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 37/149 (24%), Positives = 65/149 (43%), Gaps = 16/149 (10%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSD 117
           + +   E  R  A   H+C H++  A++ +  + V+ A   +  D   +DF    P + +
Sbjct: 554 VVLTVTESIRLDAARNHTCTHLLHAALRRVLGDHVRQAGSLVTPDRLRFDFSHIAPMTPE 613

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESK-KEAYKVEILESIPAKENV 171
           ELA +E+ +   I  D P   + +  + A +     LF  K  +  +V  + +    E+V
Sbjct: 614 ELAAVERDVNAAIMADYPLTAKLMGQQAAIDMGAMALFGEKYGDTVRVVTIGNPDHTESV 673

Query: 172 TLYRQGEWFDLCRGPHVRSTGQVKKFFKL 200
                    +LC G H+ STGQ   F  L
Sbjct: 674 ---------ELCGGTHLHSTGQAGSFVIL 693


>gi|311064741|ref|YP_003971466.1| prolyl-tRNA synthetase ProS [Bifidobacterium bifidum PRL2010]
 gi|310867060|gb|ADP36429.1| ProS Prolyl-tRNA synthetase [Bifidobacterium bifidum PRL2010]
          Length = 616

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 67/146 (45%), Gaps = 11/146 (7%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
           ++ +   G+  W   G K+   + + +R +I     +E++ P +L +  ++ +  W+ Y 
Sbjct: 46  YVRKAAPGIWTWLPLGLKVLNKIEAIVREEIDGIGAQEVHFPALLPREPYEATHRWEEYG 105

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE--P 373
            N+F +K   +       + L P +      +      SY++LPV L +  + YR+E  P
Sbjct: 106 ENLFRLKDRHEA-----DYLLAPTHEEMFTLLVKDMYSSYKDLPVTLYQIQTKYRDEFRP 160

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQ 399
                GL+R R F   DA+ F   E+
Sbjct: 161 RA---GLIRGREFIMKDAYSFTIDEE 183


>gi|306841942|ref|ZP_07474620.1| prolyl-tRNA synthetase [Brucella sp. BO2]
 gi|306287975|gb|EFM59383.1| prolyl-tRNA synthetase [Brucella sp. BO2]
          Length = 400

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/171 (23%), Positives = 74/171 (43%), Gaps = 15/171 (8%)

Query: 272 GWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G K+   + + +R  + +    EI  P +    LW++SG +D+Y   M  ++      + 
Sbjct: 4   GLKVLNKVCTIIREEQNRAGANEILMPTIQSADLWRESGRYDAYGKEMLRIQD-----RQ 58

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
            R     P N      +F   ++SY++LP+ L      +R+E      G+MR R F   D
Sbjct: 59  EREMLFGPTNEEMVTDIFRSYVRSYKDLPLNLYHIQWKFRDEVRPRF-GVMRSREFLMKD 117

Query: 391 AHVFCTKEQMFNECLKIHNLIISIYKDF---GFEKIMVKLSTRPEKRVGSD 438
           A+ F    +     +  + + +S  + F   G + I ++  T P   +G D
Sbjct: 118 AYSFDLDYE--GAKMAYYRMFVSYLRTFARVGLQAIPMRADTGP---IGGD 163


>gi|145588388|ref|YP_001154985.1| prolyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|189083506|sp|A4SVA7|SYP_POLSQ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|145046794|gb|ABP33421.1| prolyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
          Length = 580

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/161 (21%), Positives = 74/161 (45%), Gaps = 8/161 (4%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           +G+  +   G K+ + + + +R ++ +    E+  P +    LWQ++G W+     +  +
Sbjct: 37  AGIYNYLPLGLKVIRKVENIIREEMNRAGAIELLMPMIQPAELWQETGRWEKMGPELLRI 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           K   D     R F ++P +      +  + ++SY++LPV   +  + +R+E      G+M
Sbjct: 97  KDRHD-----RDFLIQPTSEEVITDLARNEIRSYKQLPVNFYQIQTKFRDERRPRF-GIM 150

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDFGFE 421
           R R F+  DA+ F    +   +  + +      I+K  G E
Sbjct: 151 RGREFSMKDAYSFDRDTEGLKKSYQTMFEAYTQIFKRMGLE 191


>gi|322689774|ref|YP_004209508.1| prolyl-tRNA synthase [Bifidobacterium longum subsp. infantis 157F]
 gi|322691722|ref|YP_004221292.1| prolyl-tRNA synthase [Bifidobacterium longum subsp. longum JCM
           1217]
 gi|320456578|dbj|BAJ67200.1| prolyl-tRNA synthase [Bifidobacterium longum subsp. longum JCM
           1217]
 gi|320461110|dbj|BAJ71730.1| prolyl-tRNA synthase [Bifidobacterium longum subsp. infantis 157F]
          Length = 614

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 79/180 (43%), Gaps = 16/180 (8%)

Query: 226 NTQQELTQYLYFLEESEKR---DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISY 282
           NT +  T +L  L E       D  KL +     +I +   G+  W   G ++   + + 
Sbjct: 14  NTLRMSTMFLRTLREDPADADVDSAKLLQRAG--YIRKAAPGIWTWLPLGLRVLNKIEAI 71

Query: 283 MRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           +R +I     +E++ P +L +  ++ +  W+ Y  N+F +K   +       + L P + 
Sbjct: 72  IREEINGIGAQEVHFPALLPREPYEATHRWEEYGDNIFRLKDRHEA-----DYLLAPTHE 126

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNE--PSGSLHGLMRVRGFTQDDAHVFCTKEQ 399
                +      SY++LPV L +  + YR+E  P     GL+R R F   DA+ F   E+
Sbjct: 127 EMFTLLVKDMYSSYKDLPVTLYQIQTKYRDEFRPRA---GLIRGREFVMKDAYSFTIDEE 183


>gi|229068144|ref|ZP_04201451.1| Prolyl-tRNA synthetase 2 [Bacillus cereus F65185]
 gi|228714958|gb|EEL66826.1| Prolyl-tRNA synthetase 2 [Bacillus cereus F65185]
          Length = 476

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 82/400 (20%), Positives = 153/400 (38%), Gaps = 69/400 (17%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHLWQ-QSGHWDSYRANMFAV 321
           G +     G+ +++ +   +  K+K   +E +  P  + + L Q +  H + +   +  V
Sbjct: 37  GCMILRPYGYALWENMQKVIDEKLKGTGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWV 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
               D  K      ++P +       F+  ++SY +LP    ++ SV R E +      +
Sbjct: 97  THGGDE-KLAERLCVRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKT--TRPFL 153

Query: 382 RVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           R   F   + H +  T E+   E L I NL  S  +D+    ++    T  EK  G+ A 
Sbjct: 154 RTTEFLWQEGHTIHETAEESQAETLNILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKAT 213

Query: 441 WDDAENIMKGVLDTIKNSSQD--RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
           +            TI++   D   + TG     G  +   F+    D  G+ WQ      
Sbjct: 214 Y------------TIESLMHDGKALQTGTSHNFGTNFSEAFDIKFLDRNGK-WQ------ 254

Query: 499 DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQ 554
                                   +H+  +G   R IG +I     N    +P  ++P+Q
Sbjct: 255 -----------------------YVHQTSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQ 291

Query: 555 AIVTTIT-------SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIII 607
            ++  I        + A+E    I  + +     ++ D  N+T  +K  E+ +K IPI +
Sbjct: 292 VVIVPIAQHKEGVLAKAIELQAHIQKVAR-----VKIDASNKTPGWKFNEYEMKGIPIRL 346

Query: 608 ICGDKEASERSIGIRRFGSTTTQKV---SLLDAIPILTKE 644
             G K+  +  + + R  +   + V    L + IP L +E
Sbjct: 347 EVGPKDIEKNQVVLVRRDTKEKEFVPMDQLEERIPALLEE 386


>gi|313141032|ref|ZP_07803225.1| prolyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171]
 gi|313133542|gb|EFR51159.1| prolyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171]
          Length = 596

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 67/146 (45%), Gaps = 11/146 (7%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
           ++ +   G+  W   G K+   + + +R +I     +E++ P +L +  ++ +  W+ Y 
Sbjct: 26  YVRKAAPGIWTWLPLGLKVLNKIEAIVREEIDGIGAQEVHFPALLPREPYEATHRWEEYG 85

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE--P 373
            N+F +K   +       + L P +      +      SY++LPV L +  + YR+E  P
Sbjct: 86  ENLFRLKDRHEA-----DYLLAPTHEEMFTLLVKDMYSSYKDLPVTLYQIQTKYRDEFRP 140

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQ 399
                GL+R R F   DA+ F   E+
Sbjct: 141 RA---GLIRGREFIMKDAYSFTIDEE 163


>gi|171057265|ref|YP_001789614.1| prolyl-tRNA synthetase [Leptothrix cholodnii SP-6]
 gi|226701306|sp|B1XYW5|SYP_LEPCP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|170774710|gb|ACB32849.1| prolyl-tRNA synthetase [Leptothrix cholodnii SP-6]
          Length = 581

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/134 (25%), Positives = 63/134 (47%), Gaps = 7/134 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           G+G+  +   G ++ + + + +R ++ +    E+  P V    LWQ++G +D     +  
Sbjct: 36  GAGIYNYMPMGLRVIRKVEAIIREEMNRAGAVELLMPVVQPAELWQETGRFDKMGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           VK   D     R F ++P +      +    L+SY++LP       + +R+E      G+
Sbjct: 96  VKDRHD-----RDFIIQPTSEEVVTDIARQELRSYKQLPKNFYHIQTKFRDERRPRF-GI 149

Query: 381 MRVRGFTQDDAHVF 394
           MR R FT  DA+ F
Sbjct: 150 MRGREFTMKDAYSF 163


>gi|150866832|ref|XP_001386559.2| prolyl-tRNA synthetase, cytoplasmic [Scheffersomyces stipitis CBS
           6054]
 gi|149388088|gb|ABN68530.2| prolyl-tRNA synthetase, cytoplasmic [Scheffersomyces stipitis CBS
           6054]
          Length = 572

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/166 (24%), Positives = 75/166 (45%), Gaps = 19/166 (11%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  +G++ W   G  I   +   +RR++ +  +EE+    +     W+++G WD+  +
Sbjct: 41  INQPRAGLVNWSPIGLTIMNKISDIIRRRMDEISFEEVKLSLLSHHSSWRKTGRWDN-SS 99

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE--PS 374
            +F +K  +        + L P      V   ++   SY+ LP+   +    +RNE  P 
Sbjct: 100 ELFKLKGEE--------YILSPTAEEDIVNYVSNNSSSYKNLPLLYYQINPKFRNEKRPR 151

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY-KDFG 419
           G   GL+R + F   DA+ F   E+   + +  +  +I  Y K FG
Sbjct: 152 G---GLLRGKEFMMKDAYSFDASEK---DAMTTYQSVIGAYTKIFG 191


>gi|126651780|ref|ZP_01723982.1| prolyl-tRNA synthetase [Bacillus sp. B14905]
 gi|126591458|gb|EAZ85565.1| prolyl-tRNA synthetase [Bacillus sp. B14905]
          Length = 483

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 72/396 (18%), Positives = 156/396 (39%), Gaps = 61/396 (15%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHLWQ-QSGHWDSYRANM-FA 320
           G I +   G++I++ +   M R+ KD  +     P ++ +  +Q +  H + +   + + 
Sbjct: 34  GCIAFKPDGYEIWEHIQEAMDRRFKDTGHRNAYFPMLIPESFFQKEKDHIEGFSPELPWV 93

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            + A + +++    AL+P +      ++++ +KSYR+LPV + ++ +V+R E        
Sbjct: 94  TEAAGEKLEE--RLALRPTSETMIGHLYSNWIKSYRDLPVLINQWANVFRWE--KKTLPF 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKL---STRPEKRVGS 437
           +R   F   + H     E+   +  K    ++ IYK+   + + + +      P +R   
Sbjct: 150 IRTSEFLWQEGHTAHVDEE---DARKETMQMLEIYKEVVEQVLAIPVYDGQKTPSERFA- 205

Query: 438 DALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ 497
                       G +DT    +  +    V  G   + G KF                  
Sbjct: 206 ------------GAVDTYSIEAMMKNGKAVQAGTSHYLGTKF------------------ 235

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG--IMIENFKGN--LPLWLSPI 553
                   FN  Y+N  ++  +   +H   +G+  R IG  IM+   +    LP  ++P 
Sbjct: 236 -----AEAFNIKYLNKANQHEY---VHTTSWGTSTRLIGSVIMVHGDEQGLVLPPRIAPT 287

Query: 554 QAIVTTI-----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIII 608
           Q ++  +         +E    I   LK+  + +  D  +++  +K  E  +K +P+ I 
Sbjct: 288 QVVLIPVGPWKKNPQIMEQLDAIFAALKAKGIRVRLDDSDQSPGFKFNEWELKGVPVRIE 347

Query: 609 CGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            G ++       ++       Q + L   +  + +E
Sbjct: 348 LGPRDLENNQALLKARDEDDKQTIELSTIVAAIEEE 383


>gi|332526531|ref|ZP_08402643.1| prolyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2]
 gi|332110799|gb|EGJ10976.1| prolyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2]
          Length = 582

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/180 (23%), Positives = 77/180 (42%), Gaps = 11/180 (6%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           G+G+  +   G ++ + + + +R ++ +    E+  P V    LW ++G + +Y   +  
Sbjct: 36  GAGIYNYMPMGLRVIRKVEAIIREEMNRAGAVELLMPVVQPAELWMETGRFQAYGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           VK   D     R F ++P +      +    L+SY++LP       + +R+E      G+
Sbjct: 96  VKDRHD-----RDFVIQPTSEEVITDIARQELRSYKQLPRTFYHVQTKFRDERRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDA 439
           MR R FT  DA+ F   K         ++    +I+  FG     V   T     +G DA
Sbjct: 150 MRGREFTMKDAYSFDRDKASALKSYDTMYRAYCAIFDRFGLTYRAVAADT---GAIGGDA 206


>gi|167589833|ref|ZP_02382221.1| prolyl-tRNA synthetase [Burkholderia ubonensis Bu]
          Length = 382

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 43/167 (25%), Positives = 76/167 (45%), Gaps = 10/167 (5%)

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI- 287
           Q+     +F +++ K +   LAR+   FH  +D +G+  W   G +  + +   +R ++ 
Sbjct: 5   QQFFSNSFFEQDNAKLELTDLARKACFFH--QDAAGLYSWMSLGLRAQRCVERVVRDEMD 62

Query: 288 KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
           +  + E+    + D  LW+QSG  D Y   +  +     T +  R F L    C    A 
Sbjct: 63  RAGFCEVQMSLLQDADLWRQSGRLDIYGDELMRL-----TNRAGRLFCLGA-TCEELAAN 116

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
                 +  +L + L +FG+ YR+E   +  GL+R R F   DA+ F
Sbjct: 117 MVRTHYNRTDLSLGLYQFGNKYRDELR-TRGGLVRAREFIMKDAYAF 162


>gi|170759289|ref|YP_001788660.1| prolyl-tRNA synthetase [Clostridium botulinum A3 str. Loch Maree]
 gi|259511588|sp|B1L224|SYP_CLOBM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|169406278|gb|ACA54689.1| proline--tRNA ligase [Clostridium botulinum A3 str. Loch Maree]
          Length = 478

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 80/396 (20%), Positives = 164/396 (41%), Gaps = 61/396 (15%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANM-FA 320
           G +     G+ I++ +  Y+  K+K+  +E ++ P  + ++L Q +  H + +   + + 
Sbjct: 39  GCMIIRPNGYAIWENIQKYVDTKLKEYGHENVSMPIFIPENLLQKEKDHVEGFAPEVAWV 98

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
               DD + +     ++P +       +   ++SY++LP    ++ SV R E +      
Sbjct: 99  THGGDDELAE--RLCVRPTSETLFCEHYAKIVQSYKDLPKLYNQWCSVVRWEKT--TRPF 154

Query: 381 MRVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDA 439
           +R   F   + H +  TKE+  +  LKI N+   + +D     +++   T  EK  G+D 
Sbjct: 155 LRTTEFLWQEGHTIHETKEEAESHSLKILNMYSRLCEDMLAMPVVMGKKTEKEKFAGADD 214

Query: 440 LWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-V 498
            +            TI++   D                          G+  Q GT   +
Sbjct: 215 TY------------TIESLMHD--------------------------GKALQAGTSHYL 236

Query: 499 DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQ 554
             N    F   + + + +  +P   H   +    R IG +I    ++    LP  ++P Q
Sbjct: 237 GQNFSKAFAIQFSDRNGKLEYP---HYTTWAVTTRLIGAIIMVHGDDSGLKLPPRIAPTQ 293

Query: 555 AIVTTITS---SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
           A++  +       +E A+E+   L +  + ++ D  ++   +K  E+ +K IP+ I  G 
Sbjct: 294 AVIIPVAQHKEGVLEKAKELKEKL-AKVVRVKLDDSDKMPGWKYSEYEMKGIPLRIEIGP 352

Query: 612 KEASE-RSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           K+  + +++ +RR     T  +  LD I I  +E L
Sbjct: 353 KDIEKNQAVLVRRDNREKT--IVSLDEIEIKVQEML 386


>gi|160881639|ref|YP_001560607.1| phosphoribulokinase/uridine kinase [Clostridium phytofermentans
           ISDg]
 gi|160430305|gb|ABX43868.1| phosphoribulokinase/uridine kinase [Clostridium phytofermentans
           ISDg]
          Length = 553

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 44/191 (23%), Positives = 83/191 (43%), Gaps = 5/191 (2%)

Query: 11  DGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRS 69
           +G  K +       ++++        + + V +NG++ +L   V++  +IE +T  +   
Sbjct: 9   NGVTKEYTQGTAYLEISKEYQPQFKHEIILVLMNGRLRELFKTVKQDCTIEFVTITEDAG 68

Query: 70  LAVIRHSCAHIMAEAVQSIWPEV---QVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKM 126
                     +M  A+  +       +V +   I  G Y + D +    +  + +++K+M
Sbjct: 69  RKTYARGLIFVMIRAIYRVLGHDNIDKVRVEHSIGSGLYCELDGKVKVDATLMDKVKKEM 128

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGP 186
           Q II RD PF+K+ ++  +A ELF  K + Y  E L       +  LY    + D   G 
Sbjct: 129 QSIIHRDIPFMKRSIATAEAAELFH-KYQMYDKEKLFRYRRVSSANLYNLDGFEDYYYGY 187

Query: 187 HVRSTGQVKKF 197
              STG +K F
Sbjct: 188 MPASTGILKYF 198


>gi|304391639|ref|ZP_07373581.1| prolyl-tRNA synthetase [Ahrensia sp. R2A130]
 gi|303295868|gb|EFL90226.1| prolyl-tRNA synthetase [Ahrensia sp. R2A130]
          Length = 451

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/167 (24%), Positives = 73/167 (43%), Gaps = 9/167 (5%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KI 287
           LTQY   + +   R+    + ++ L    I +  +G+  W   G K+ + +   +R  + 
Sbjct: 3   LTQYFLPVLKEAPREAEIASHQLMLRAGMIKQQSAGIYSWLPLGLKVLRKVEQIVREEQN 62

Query: 288 KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
           +    E+  P +    LW++SG +D Y   M  ++      +  R     P N      +
Sbjct: 63  RAGAVEVLMPTIQSADLWRESGRYDDYGKEMLRIQD-----RHERDMLFGPTNEEMITDI 117

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           F   +KSY++LP+ L      +R+E      G+MR R F   DA+ F
Sbjct: 118 FRTYVKSYKDLPLNLYHIQWKFRDEVRPRF-GVMRGREFLMKDAYSF 163


>gi|184201256|ref|YP_001855463.1| prolyl-tRNA synthetase [Kocuria rhizophila DC2201]
 gi|226701301|sp|B2GKS1|SYP_KOCRD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|183581486|dbj|BAG29957.1| prolyl-tRNA synthetase [Kocuria rhizophila DC2201]
          Length = 606

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/178 (21%), Positives = 76/178 (42%), Gaps = 14/178 (7%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
           +I     G+  W   G  + + +   +R ++     +E++ P +L +  ++ S  W  Y 
Sbjct: 33  YIRRAAPGIYTWLPLGLAVLRRVEGIVREEMDAIGAQEVHFPALLPREPYEASNRWTEYG 92

Query: 316 ANMFAV---KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE 372
            N+F +   K AD        + L P +      +      SY++LPV L +  + YR+E
Sbjct: 93  ENLFRLQDRKGAD--------YLLAPTHEEMFTLLVKDMYSSYKDLPVMLYQIQTKYRDE 144

Query: 373 PSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI-ISIYKDFGFEKIMVKLST 429
            +    GL+R R F   D++ F   +   ++    H    + I++  G   + V  ++
Sbjct: 145 -ARPRAGLLRGREFIMKDSYSFDVDDAGLDDAYAKHRAAYVRIFERLGLPVVAVSATS 201


>gi|84394652|ref|ZP_00993343.1| prolyl-tRNA synthetase [Vibrio splendidus 12B01]
 gi|84374725|gb|EAP91681.1| prolyl-tRNA synthetase [Vibrio splendidus 12B01]
          Length = 551

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/161 (24%), Positives = 73/161 (45%), Gaps = 8/161 (4%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG+  W   G ++ + + + +R++I +    EI  P V    LW+++G     R+     
Sbjct: 17  SGLYTWLPTGLRVLRKVENIVRQEIDNAGAVEILMPVVQPFELWEETG-----RSEKMGP 71

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           +    T +  R F L P       ++  + + SY++LP+ L +  + +R+E      G+M
Sbjct: 72  ELLRFTDRHSRPFVLSPTAEEVVTSLVRNEISSYKQLPLNLYQIQTKFRDERRPRF-GVM 130

Query: 382 RVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFE 421
           R R F+  DA+ F   KE +      +H+     +   G E
Sbjct: 131 RAREFSMMDAYSFDIDKEGLEKSYQAMHDAYCKAFDRMGLE 171


>gi|239621659|ref|ZP_04664690.1| prolyl-tRNA synthetase [Bifidobacterium longum subsp. infantis CCUG
           52486]
 gi|239515534|gb|EEQ55401.1| prolyl-tRNA synthetase [Bifidobacterium longum subsp. infantis CCUG
           52486]
          Length = 607

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 79/180 (43%), Gaps = 16/180 (8%)

Query: 226 NTQQELTQYLYFLEESEKR---DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISY 282
           NT +  T +L  L E       D  KL +     +I +   G+  W   G ++   + + 
Sbjct: 7   NTLRMSTMFLRTLREDPADADVDSAKLLQRAG--YIRKAAPGIWTWLPLGLRVLNKIEAI 64

Query: 283 MRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           +R +I     +E++ P +L +  ++ +  W+ Y  N+F +K   +       + L P + 
Sbjct: 65  IREEINGIGAQEVHFPALLPREPYEATHRWEEYGDNIFRLKDRHEA-----DYLLAPTHE 119

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNE--PSGSLHGLMRVRGFTQDDAHVFCTKEQ 399
                +      SY++LPV L +  + YR+E  P     GL+R R F   DA+ F   E+
Sbjct: 120 EMFTLLVKDMYSSYKDLPVTLYQIQTKYRDEFRPRA---GLIRGREFVMKDAYSFTIDEE 176


>gi|195443826|ref|XP_002069593.1| GK11601 [Drosophila willistoni]
 gi|194165678|gb|EDW80579.1| GK11601 [Drosophila willistoni]
          Length = 1717

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 70/308 (22%), Positives = 118/308 (38%), Gaps = 58/308 (18%)

Query: 334  FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
             A++P +       +   ++SYR+LP++L ++ +V R E        +R R F   + H 
Sbjct: 1320 IAVRPTSETVMYPAYAKWIQSYRDLPIKLNQWNNVVRWE-FKHPQPFLRTREFLWQEGHT 1378

Query: 394  -FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
             +  K++   E L+I +L   IY       +M    T  EK  G D              
Sbjct: 1379 AYANKDEADKEVLEILDLYALIYTHLLAIPVMKGRKTEKEKFAGGD-------------- 1424

Query: 453  DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYV 511
                                  Y    E  +  A GR  Q  T   +  N    F   Y 
Sbjct: 1425 ----------------------YTTTVEAFI-SASGRAIQGATSHHLGQNFSKMFEIVYE 1461

Query: 512  NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVT----TITSS 563
            +  +++     +++  +G   R IG+MI     N  L L P    IQAIV     T+ + 
Sbjct: 1462 DPETQQKK--FVYQNSWGITTRTIGVMIMVHADNQGLVLPPHVACIQAIVVPCGITVNTK 1519

Query: 564  AVEYAQ------EIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKE-AS 615
              E A+      ++   L    +  E D+R N +  +K     +K +PI I  G K+  +
Sbjct: 1520 DEERAELLGACKQLEQRLIGAEVRCEGDYRDNYSPGWKFNHWELKGVPIRIEVGPKDLKA 1579

Query: 616  ERSIGIRR 623
            ++ + +RR
Sbjct: 1580 QQIVAVRR 1587


>gi|157113280|ref|XP_001657757.1| mitochondrial 39S ribosomal protein L39 [Aedes aegypti]
 gi|108877802|gb|EAT42027.1| mitochondrial 39S ribosomal protein L39 [Aedes aegypti]
          Length = 284

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 56/243 (23%), Positives = 108/243 (44%), Gaps = 25/243 (10%)

Query: 21  ATGSDVAESISRSLAK-KAVAVAINGKVCDLSDPVREG-SIEII--TPEDPRSL-AVIRH 75
           +T  D A+ I     +  A+A+  N    D+  P+ E  +++++  T  DP  +      
Sbjct: 28  STPHDCAKHIGEKYCRFSALALLDNNTAWDMRRPLEESCTLQLLNFTSADPHLVNKACWR 87

Query: 76  SCAHIMAEAVQSIW-----------PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           +C+ ++   +   +           P+  V  G  + D      +  +P +S EL  +  
Sbjct: 88  TCSFLLGSVLHKSFKDEAGLFLHSFPKPNVKTGSFVHD-IALSKNGWKP-TSQELRALSI 145

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN--VTLYRQGEWFDL 182
           +M ++  +D P  +  ++ E A+++F      YK E + SI ++ N  +T+YR G+  D+
Sbjct: 146 EMIKLSQQDLPIERLDVTSEVAQQMFSDN--PYKREQIPSISSQNNGLITVYRVGDHVDI 203

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY-FLEES 241
            +GP V STG V K    +       +  +++  L R+ G A      L  + Y  LE+ 
Sbjct: 204 SKGPMVSSTGLVGKC--TIAAIHEVPKSSADKLSLYRVQGVALPIGLNLNHFAYGILEDR 261

Query: 242 EKR 244
            K+
Sbjct: 262 AKK 264


>gi|226324581|ref|ZP_03800099.1| hypothetical protein COPCOM_02365 [Coprococcus comes ATCC 27758]
 gi|225207029|gb|EEG89383.1| hypothetical protein COPCOM_02365 [Coprococcus comes ATCC 27758]
          Length = 557

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 49/194 (25%), Positives = 83/194 (42%), Gaps = 6/194 (3%)

Query: 11  DGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRS 69
           DG  ++FP   T   +A           V V +NGK+ +L   +++  ++  +T  +   
Sbjct: 11  DGEERSFPAGTTYLQIAGEYQERYPHDIVLVYVNGKLQELGKKLKKDCALHFVTTGETIG 70

Query: 70  LAVIRHSCAHIMAEAVQSIWPE---VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKM 126
               R   + ++ +AV          QV I   ++ G+Y     +Q      LA+IE++M
Sbjct: 71  NLTYRRGVSFLLVKAVYDTIGHDKIEQVRIHFSVDKGYYCTIKGDQKLDQKLLARIEERM 130

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGP 186
            E+   D    K+ +  ++A E+F       K E L        V +Y   E+ D   G 
Sbjct: 131 HEMADMDLSIRKRSVHTDEAVEMFRKYGMKDK-ERLFRYRRVSTVNIYSINEFEDYYYGY 189

Query: 187 HVRSTGQVKKFFKL 200
            V STG + K+FKL
Sbjct: 190 MVPSTGYL-KYFKL 202


>gi|94987623|ref|YP_595556.1| alanyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00]
 gi|205830129|sp|Q1MP42|SYA_LAWIP RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|94731872|emb|CAJ55235.1| Alanyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00]
          Length = 884

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 59/143 (41%), Gaps = 14/143 (9%)

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSDEL 119
           ++  E  R      H+C HI+   +Q I  +     G ++      +DF    P + +E+
Sbjct: 556 LVVSESERLDTARNHTCTHILQSVLQKILGDHVRQAGSLVSPTRLRFDFTHIAPLTEEEI 615

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLY 174
             IE ++  II  + P   +++  + A E     LFE K   Y   +       EN    
Sbjct: 616 HAIELQVNTIIMANLPLRVEFMDQQSALEKGAMALFEEK---YGNIVRVVTIGSEN---- 668

Query: 175 RQGEWFDLCRGPHVRSTGQVKKF 197
            Q    +LC G H+ STGQ   F
Sbjct: 669 -QTASIELCGGTHLTSTGQAGCF 690


>gi|54310060|ref|YP_131080.1| prolyl-tRNA synthetase [Photobacterium profundum SS9]
 gi|81828683|sp|Q6LN48|SYP_PHOPR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|46914499|emb|CAG21278.1| putative prolyl-tRNA synthetase [Photobacterium profundum SS9]
          Length = 571

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/162 (24%), Positives = 73/162 (45%), Gaps = 8/162 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R++I +    EI  P V    LW+++G     R+    
Sbjct: 36  ASGLYTWLPTGLRVLRKVENIVRQEIDNAGAVEILMPVVQPFELWEETG-----RSEKMG 90

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +    T +  R F L P       ++  + + SY++LP+ L +  + +R+E      G+
Sbjct: 91  PELLRFTDRHSRPFVLSPTAEEVVTSLVRNEISSYKQLPLNLYQIQTKFRDERRPRF-GV 149

Query: 381 MRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFE 421
           MR R F+  DA+ F   KE +      +H+     +   G E
Sbjct: 150 MRAREFSMMDAYSFDIDKEGLEKSYQAMHDAYCKAFDRMGLE 191


>gi|260427849|ref|ZP_05781828.1| alanyl-tRNA synthetase [Citreicella sp. SE45]
 gi|260422341|gb|EEX15592.1| alanyl-tRNA synthetase [Citreicella sp. SE45]
          Length = 906

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/137 (24%), Positives = 63/137 (45%), Gaps = 8/137 (5%)

Query: 68  RSLAVIRHSCAHIMAEAVQ-SIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKM 126
           R +    HS  H++ EA++ ++ P V         D   +DF   +  +++E+AQ+E ++
Sbjct: 577 RGMIRANHSATHLLHEALRRALGPHVAQRGSLNAPDRLRFDFSHAKALTAEEIAQVETEV 636

Query: 127 QEIIARDSPFLKQYLSHEKARELFESK--KEAYKVEILESIPAKENVTLYRQGEW----F 180
              I +++P   + ++ + AR +       E Y  E+   +   E     + G+      
Sbjct: 637 NAFIRQNAPVTTRIMTPDDARAIGAQALFGEKYGDEV-RVVSMGELAGSGKGGDGKTYSL 695

Query: 181 DLCRGPHVRSTGQVKKF 197
           +LC G HVR TG +  F
Sbjct: 696 ELCGGTHVRQTGDIGTF 712


>gi|224283879|ref|ZP_03647201.1| prolyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171]
 gi|310287860|ref|YP_003939118.1| prolyl-tRNA synthetase [Bifidobacterium bifidum S17]
 gi|309251796|gb|ADO53544.1| prolyl-tRNA synthetase [Bifidobacterium bifidum S17]
          Length = 599

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 67/146 (45%), Gaps = 11/146 (7%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
           ++ +   G+  W   G K+   + + +R +I     +E++ P +L +  ++ +  W+ Y 
Sbjct: 29  YVRKAAPGIWTWLPLGLKVLNKIEAIVREEIDGIGAQEVHFPALLPREPYEATHRWEEYG 88

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE--P 373
            N+F +K   +       + L P +      +      SY++LPV L +  + YR+E  P
Sbjct: 89  ENLFRLKDRHEA-----DYLLAPTHEEMFTLLVKDMYSSYKDLPVTLYQIQTKYRDEFRP 143

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQ 399
                GL+R R F   DA+ F   E+
Sbjct: 144 RA---GLIRGREFIMKDAYSFTIDEE 166


>gi|183221968|ref|YP_001839964.1| prolyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
 gi|189912036|ref|YP_001963591.1| prolyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|226701304|sp|B0SDM9|SYP_LEPBA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226701305|sp|B0SM58|SYP_LEPBP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|167776712|gb|ABZ95013.1| Prolyl-tRNA ligase [Leptospira biflexa serovar Patoc strain 'Patoc
           1 (Ames)']
 gi|167780390|gb|ABZ98688.1| Prolyl-tRNA synthetase (Proline--tRNA ligase; ProRS) [Leptospira
           biflexa serovar Patoc strain 'Patoc 1 (Paris)']
          Length = 586

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/145 (23%), Positives = 67/145 (46%), Gaps = 21/145 (14%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  +G+  +   G ++ + +   +R+++ K    E   P +    +W++SG WD    
Sbjct: 32  IRKSAAGLYSYLPLGLRVLRKIEGIVRKEMDKAGGLEFQLPILTPSEIWKESGRWDKMGK 91

Query: 317 NMFAVK-------CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVY 369
            MF +K       C   T ++     +KPM            ++SY++LP+ + +  + +
Sbjct: 92  EMFRLKDRHDNESCLGPTHEESFCVLVKPM------------VRSYKDLPINVYQIHTKF 139

Query: 370 RNEPSGSLHGLMRVRGFTQDDAHVF 394
           R+E      G++R R FT  DA+ F
Sbjct: 140 RDEIRPRF-GVIRSREFTMKDAYSF 163


>gi|84501591|ref|ZP_00999763.1| prolyl-tRNA synthetase [Oceanicola batsensis HTCC2597]
 gi|84390212|gb|EAQ02771.1| prolyl-tRNA synthetase [Oceanicola batsensis HTCC2597]
          Length = 445

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/183 (21%), Positives = 79/183 (43%), Gaps = 11/183 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  +G+  W   G+++ + +   +   + +  +  +  P +    LW++SG +D+Y  
Sbjct: 32  IKQASAGIYSWLPLGYRVLRRIEQIVHEEQQRAGHIPLLMPTLQSADLWRESGRYDAYGP 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  ++   D     R     P N      +F   ++SY++LP+ L      +R+E    
Sbjct: 92  EMLRIRDRHD-----RDMLFGPTNEELITDIFRSYVRSYKDLPMTLYHIQWKFRDEVRPR 146

Query: 377 LHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
             G+MR R F   D + F  TKE   +   +     +  Y+  G + I ++  + P   +
Sbjct: 147 F-GVMRGREFLMKDGYNFDLTKEDALHAYNRHLVSYLRTYERMGLQAIPMRADSGP---I 202

Query: 436 GSD 438
           G D
Sbjct: 203 GGD 205


>gi|71274618|ref|ZP_00650906.1| Prolyl-tRNA synthetase, bacterial [Xylella fastidiosa Dixon]
 gi|170730883|ref|YP_001776316.1| prolyl-tRNA synthetase [Xylella fastidiosa M12]
 gi|226701359|sp|B0U4A7|SYP_XYLFM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|71164350|gb|EAO14064.1| Prolyl-tRNA synthetase, bacterial [Xylella fastidiosa Dixon]
 gi|167965676|gb|ACA12686.1| Proline--tRNA ligase [Xylella fastidiosa M12]
          Length = 564

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/184 (21%), Positives = 78/184 (42%), Gaps = 11/184 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E   HR + R   +  +A   SG+  W   G ++ + + + +R ++ +    E+  P 
Sbjct: 17  DAELVSHRLMLRAGMIRKLA---SGLYTWSPLGLRVLRKVEAIVRDEMNRAGAVEMLLPT 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +  + LW++S  W+ + + +  +K      +    +   P             L SY++L
Sbjct: 74  IQPRELWEESERWEKFGSQLLKIKD-----RKQAEYCYSPTAEEAVTDYVRQELTSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKD 417
           PV L +  + +R+E      G+MR R F   DA+ F  +   +  E   +      I+  
Sbjct: 129 PVNLYQIQTKFRDEIRPRF-GVMRAREFVMKDAYSFHLSDADLVREYENMRATYTRIFTR 187

Query: 418 FGFE 421
            G E
Sbjct: 188 LGLE 191


>gi|255011540|ref|ZP_05283666.1| uridine kinase [Bacteroides fragilis 3_1_12]
 gi|313149366|ref|ZP_07811559.1| uridine kinase [Bacteroides fragilis 3_1_12]
 gi|313138133|gb|EFR55493.1| uridine kinase [Bacteroides fragilis 3_1_12]
          Length = 557

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/184 (20%), Positives = 82/184 (44%), Gaps = 2/184 (1%)

Query: 15  KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVI 73
           K FP+ ++  D+    + +   + V+  +N +   L+  V     +E +   D   +   
Sbjct: 16  KEFPIGSSLLDIYYGFNLNFPYQVVSAKVNNRSEGLNFRVYNNKDVEFLDVRDSSGMRTY 75

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
             S   ++ +AV  ++P  ++ +   +  G++ +    +  + ++++QI+K+MQEII  +
Sbjct: 76  VRSLCFVLYKAVSELFPNGKLFVEHPVSKGYFCNLRIGRAITLEDVSQIKKRMQEIITEN 135

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQ 193
             + +      +A  +F  +    KV++LES         Y  G   D   G  + STG 
Sbjct: 136 ITYHRIECHTTEAVRVFSERGMNDKVKLLES-SGSIYTYYYTLGGTADYYYGNLLPSTGF 194

Query: 194 VKKF 197
           +  F
Sbjct: 195 IHLF 198


>gi|242793409|ref|XP_002482155.1| prolyl-tRNA synthetase [Talaromyces stipitatus ATCC 10500]
 gi|218718743|gb|EED18163.1| prolyl-tRNA synthetase [Talaromyces stipitatus ATCC 10500]
          Length = 593

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 91/409 (22%), Positives = 157/409 (38%), Gaps = 67/409 (16%)

Query: 261 DGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANM 318
           D SG        + +++T+ ++   KIK       + P  + + + Q +  H + + A +
Sbjct: 107 DVSGCFILKPASYFVWETIQNWFNDKIKKMGVRNCSFPLFVSEDVLQREKDHIEGFAAEV 166

Query: 319 FAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLH 378
             V  A  T  + R  A++P +       +   ++S+R+LP++L ++ SV R E      
Sbjct: 167 AWVTHAGSTPLE-RKIAIRPTSETVMYPYYAKWIRSHRDLPLKLNQWNSVVRWEFKHP-Q 224

Query: 379 GLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGS 437
             +R R F   + H    T+E    E L+I +    +Y+D     ++    T  EK    
Sbjct: 225 PFLRTREFLWQEGHTAHLTEESAAEEVLQILDHYAHVYEDLLAVPVVRGKKTEKEKFA-- 282

Query: 438 DALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ 497
                                             G +Y    E  +  A GR  Q GT  
Sbjct: 283 ----------------------------------GGYYTTTVEGYIP-ATGRGIQGGTSH 307

Query: 498 -VDFNLPSRFNAFYVNSHS---EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP- 552
            +  N    F     + ++   +K   + + +  +G   R IG+M+     N  L L P 
Sbjct: 308 CLGQNFSKMFGITVEDPNAKGEDKGASLYVWQNSWGLSTRTIGVMVMIHSDNRGLVLPPR 367

Query: 553 ---IQAIVT----TITSSAVEYAQ------EIANLLKSHHLSIETDFRNE-TINYKIREH 598
              IQ I+     T  ++  E AQ      E+A+ L +  +  ETD R+  +  YK  + 
Sbjct: 368 VAEIQTIIVPVGITKNTTDEERAQIYKDCSELASKLAAVGVRTETDLRDGYSPGYKFNDW 427

Query: 599 SIKKIPIIIICGDKEASERSIGIRRF------GSTTTQKVSLLDAIPIL 641
            ++ +P+ +  G  EA    I   R       G TT    SL  A+P L
Sbjct: 428 ELRGVPLRLEFGPGEAKGGFITASRRDIPGKDGKTTIPLNSLTTAVPEL 476


>gi|13470354|ref|NP_101920.1| alanyl-tRNA synthetase [Mesorhizobium loti MAFF303099]
 gi|20532259|sp|Q98NQ5|SYA_RHILO RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|14021093|dbj|BAB47706.1| alanyl-tRNA synthetase [Mesorhizobium loti MAFF303099]
          Length = 888

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/159 (25%), Positives = 72/159 (45%), Gaps = 15/159 (9%)

Query: 45  GKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-D 102
           GKV   S  V+ G+ +E+      R+     HS  H++ EA++ +        G ++  +
Sbjct: 535 GKVA--SGTVKTGAAVELKVDHARRTRLRANHSATHLIHEALREVLGTHVAQKGSLVAPE 592

Query: 103 GFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLS-----HEKARELFESK--KE 155
              +D    +P S++EL ++E+   EI+ ++SP   + +S      E A  LF  K   E
Sbjct: 593 RLRFDISHNKPISAEELEEVERMANEIVVQNSPVTTRLMSVDDAIAEGAMALFGEKYGDE 652

Query: 156 AYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQV 194
              V +   +   +    Y      +LC G HVR+TG +
Sbjct: 653 VRVVSMGTGLHGAKANRPYS----VELCGGTHVRATGDI 687


>gi|70995366|ref|XP_752440.1| prolyl-tRNA synthetase [Aspergillus fumigatus Af293]
 gi|66850075|gb|EAL90402.1| prolyl-tRNA synthetase [Aspergillus fumigatus Af293]
          Length = 584

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 58/124 (46%), Gaps = 20/124 (16%)

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           Q LW+QSG           +K   ++      F L P +      +     KSYR+LP+R
Sbjct: 74  QELWEQSGR----------LKEGSES-----RFLLAPTHEEEITTLVGSLTKSYRDLPLR 118

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           + +    YR+EP     GL+R R F   D + F   +    E LK +NL+ + YK+  F+
Sbjct: 119 VYQISRKYRDEPR-PRQGLLRGREFLMKDLYTF---DYSVEEALKTYNLVKAAYKNL-FD 173

Query: 422 KIMV 425
           ++ +
Sbjct: 174 ELKI 177


>gi|253567819|ref|ZP_04845230.1| threonyl-tRNA synthetase [Bacteroides sp. 1_1_6]
 gi|251841892|gb|EES69972.1| threonyl-tRNA synthetase [Bacteroides sp. 1_1_6]
          Length = 82

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 38/70 (54%)

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           LK H +    D RNE I  KIR++ +K+IP ++I G+KEA    + +RR G      +  
Sbjct: 5   LKMHEIRAIVDDRNEKIGRKIRDNEMKRIPYMLIVGEKEAENGEVSVRRQGEGDKGTMKY 64

Query: 635 LDAIPILTKE 644
            +   IL +E
Sbjct: 65  EEFAKILNEE 74


>gi|46190981|ref|ZP_00120791.2| COG0442: Prolyl-tRNA synthetase [Bifidobacterium longum DJO10A]
 gi|317482435|ref|ZP_07941452.1| prolyl-tRNA synthetase [Bifidobacterium sp. 12_1_47BFAA]
 gi|316916095|gb|EFV37500.1| prolyl-tRNA synthetase [Bifidobacterium sp. 12_1_47BFAA]
          Length = 594

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 67/146 (45%), Gaps = 11/146 (7%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
           +I +   G+  W   G ++   + + +R +I     +E++ P +L +  ++ +  W+ Y 
Sbjct: 26  YIRKAAPGIWTWLPLGLRVLNKIEAIIREEINGIGAQEVHFPALLPREPYEATHRWEEYG 85

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE--P 373
            N+F +K   +       + L P +      +      SY++LPV L +  + YR+E  P
Sbjct: 86  DNIFRLKDRHEA-----DYLLAPTHEEMFTLLVKDMYSSYKDLPVTLYQIQTKYRDEFRP 140

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQ 399
                GL+R R F   DA+ F   E+
Sbjct: 141 RA---GLIRGREFVMKDAYSFTIDEE 163


>gi|159131195|gb|EDP56308.1| prolyl-tRNA synthetase [Aspergillus fumigatus A1163]
          Length = 584

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 58/124 (46%), Gaps = 20/124 (16%)

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           Q LW+QSG           +K   ++      F L P +      +     KSYR+LP+R
Sbjct: 74  QELWEQSGR----------LKEGSES-----RFLLAPTHEEEITTLVGSLTKSYRDLPLR 118

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           + +    YR+EP     GL+R R F   D + F   +    E LK +NL+ + YK+  F+
Sbjct: 119 VYQISRKYRDEPR-PRQGLLRGREFLMKDLYTF---DYSVEEALKTYNLVKAAYKNL-FD 173

Query: 422 KIMV 425
           ++ +
Sbjct: 174 ELKI 177


>gi|58425026|gb|AAW74063.1| prolyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC10331]
          Length = 595

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/202 (20%), Positives = 83/202 (41%), Gaps = 14/202 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E   HR + R   +  +A   SG+  W   G ++ + + + +R ++ +    E+  P 
Sbjct: 48  DAELVSHRLMLRAGMIRKLA---SGLYTWSPLGLRVLRKVEAIVREEMDRAGAVEVLFPT 104

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +  + LW  +G W+ +   +  +K   +     + F   P             + SY++L
Sbjct: 105 IQPRELWDATGRWEKFGGQLLKIKDRKE-----QEFCYSPTAEEAAAEFARQEINSYKQL 159

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKD 417
           P+   +  + +R+E      G+MR R F   DA+ F  T   M  E   +      I+  
Sbjct: 160 PLNFYQIQTKFRDEIRPRF-GVMRAREFLMKDAYSFHLTDADMAREYDNMRAAYTRIFTR 218

Query: 418 FGFEKIMVKLSTRPEKRVGSDA 439
            G +   V+  +     +G DA
Sbjct: 219 LGLDFRAVQADS---GAIGGDA 237


>gi|86146905|ref|ZP_01065224.1| prolyl-tRNA synthetase [Vibrio sp. MED222]
 gi|85835357|gb|EAQ53496.1| prolyl-tRNA synthetase [Vibrio sp. MED222]
          Length = 546

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/161 (24%), Positives = 73/161 (45%), Gaps = 8/161 (4%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG+  W   G ++ + + + +R++I +    EI  P V    LW+++G     R+     
Sbjct: 12  SGLYTWLPTGLRVLRKVENIVRQEIDNAGAVEILMPVVQPFELWEETG-----RSEKMGP 66

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           +    T +  R F L P       ++  + + SY++LP+ L +  + +R+E      G+M
Sbjct: 67  ELLRFTDRHSRPFVLSPTAEEVVTSLVRNEISSYKQLPLNLYQIQTKFRDERRPRF-GVM 125

Query: 382 RVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFE 421
           R R F+  DA+ F   KE +      +H+     +   G E
Sbjct: 126 RAREFSMMDAYSFDIDKEGLEKSYQAMHDAYCKAFDRMGLE 166


>gi|225023763|ref|ZP_03712955.1| hypothetical protein EIKCOROL_00627 [Eikenella corrodens ATCC
           23834]
 gi|224943457|gb|EEG24666.1| hypothetical protein EIKCOROL_00627 [Eikenella corrodens ATCC
           23834]
          Length = 570

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 37/167 (22%), Positives = 70/167 (41%), Gaps = 9/167 (5%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I  + SG+  W   G ++ + + + +R ++ +    E+  P +    LW++SG WD Y  
Sbjct: 32  IKANASGLYTWMPMGLRVLRKVEAVVREEMNRAGAIELLMPVIQPADLWKESGRWDFYGD 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            +  +    D      TF   P        +    + SY++LP       + +R+E    
Sbjct: 92  ELLRITDRHDN-----TFCFSPTCEELITDIVRKEITSYKQLPKNFYHIQTKFRDERRPR 146

Query: 377 LHGLMRVRGFTQDDAHVF-CTKEQMFNECLK-IHNLIISIYKDFGFE 421
             G+MR R F   DA+ F    E +  E  + ++N    ++   G +
Sbjct: 147 F-GVMRAREFVMKDAYSFHADYESLVREGYQPMYNAYCRVFDRLGLD 192


>gi|213691491|ref|YP_002322077.1| prolyl-tRNA synthetase [Bifidobacterium longum subsp. infantis ATCC
           15697]
 gi|213522952|gb|ACJ51699.1| prolyl-tRNA synthetase [Bifidobacterium longum subsp. infantis ATCC
           15697]
 gi|320457566|dbj|BAJ68187.1| prolyl-tRNA synthase [Bifidobacterium longum subsp. infantis ATCC
           15697]
          Length = 604

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 79/180 (43%), Gaps = 16/180 (8%)

Query: 226 NTQQELTQYLYFLEESEKR---DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISY 282
           NT +  T +L  L E       D  KL +     +I +   G+  W   G ++   + + 
Sbjct: 4   NTLRMSTMFLRTLREDPADADVDSAKLLQRAG--YIRKAAPGIWTWLPLGLRVLNKIEAI 61

Query: 283 MRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           +R +I     +E++ P +L +  ++ +  W+ Y  N+F +K   +       + L P + 
Sbjct: 62  IREEINGIGAQEVHFPALLPREPYEATHRWEEYGDNIFRLKDRHEA-----DYLLAPTHE 116

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNE--PSGSLHGLMRVRGFTQDDAHVFCTKEQ 399
                +      SY++LPV L +  + YR+E  P     GL+R R F   DA+ F   E+
Sbjct: 117 EMFTLLVKDMYSSYKDLPVTLYQIQTKYRDEFRPRA---GLIRGREFIMKDAYSFTIDEE 173


>gi|10800405|gb|AAG23138.2|AF245446_1 prolyl-tRNA synthetase [Giardia intestinalis]
          Length = 542

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 79/373 (21%), Positives = 151/373 (40%), Gaps = 75/373 (20%)

Query: 271 KGWKIFQTLISYMRRKI----KDDYEEINTPQVL------DQHLWQQSGHWDSYRANMFA 320
           KG  +F+    +M   I    +++Y ++   Q+L      +  L ++S H   + A  F 
Sbjct: 69  KGCVVFRPYGFFMENAIMRLCEEEYAKVGISQILFPTVIPESFLKKESDHIKGFEAECFW 128

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           V+       + R  AL+P +     ++F+  ++SY++LP+++ +  +++R+E   +   L
Sbjct: 129 VEKGGLQPLEER-LALRPTSETAIYSMFSKWVRSYKDLPLKIHQTCTIFRHETKNT-KPL 186

Query: 381 MRVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDA 439
           +RVR    ++AH    T E   ++      +I +I+ D                      
Sbjct: 187 IRVREIHWNEAHCCHATAEDAVSQLSDYWKVIDTIFSD---------------------- 224

Query: 440 LWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVD 499
                E   KG    ++    DR         GA Y    + ++    GR  Q   I   
Sbjct: 225 -----ELCFKG--QKLRRVCWDRF-------PGADYSEVSDVVM--PCGRVLQTAGIH-- 266

Query: 500 FNLPSRFNA----FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN--LPLWLSPI 553
            NL  RF++     Y N  +E  HP +    +   +     + I    G   LP  ++PI
Sbjct: 267 -NLGQRFSSTFDILYANKANESVHPYLTCAGISTRV-LACALSIHGDSGGLVLPPLIAPI 324

Query: 554 QAIVTTITSS----------AVEYAQEIANLLKSH---HLSIETDFRNETINYKIREHSI 600
             ++  I              +    EIA+ LKS     +SI+ DF ++++  K+  + +
Sbjct: 325 HVVIIPIGCGKKNNQESDQQVLGKVNEIADTLKSKLGLRVSIDDDF-SKSMGDKLYYYEL 383

Query: 601 KKIPIIIICGDKE 613
           K +P+ I  G ++
Sbjct: 384 KGVPLRIEVGQRD 396


>gi|159110155|ref|XP_001705339.1| Prolyl-tRNA synthetase [Giardia lamblia ATCC 50803]
 gi|157433422|gb|EDO77665.1| Prolyl-tRNA synthetase [Giardia lamblia ATCC 50803]
          Length = 542

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 79/373 (21%), Positives = 151/373 (40%), Gaps = 75/373 (20%)

Query: 271 KGWKIFQTLISYMRRKI----KDDYEEINTPQVL------DQHLWQQSGHWDSYRANMFA 320
           KG  +F+    +M   I    +++Y ++   Q+L      +  L ++S H   + A  F 
Sbjct: 69  KGCVVFRPYGFFMENAIMRLCEEEYAKVGISQILFPTVIPESFLKKESDHIKGFEAECFW 128

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           V+       + R  AL+P +     ++F+  ++SY++LP+++ +  +++R+E   +   L
Sbjct: 129 VEKGGLQPLEER-LALRPTSETAIYSMFSKWVRSYKDLPLKIHQTCTIFRHETKNT-KPL 186

Query: 381 MRVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDA 439
           +RVR    ++AH    T E   ++      +I +I+ D                      
Sbjct: 187 IRVREIHWNEAHCCHATAEDAVSQLSDYWKVIDTIFSD---------------------- 224

Query: 440 LWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVD 499
                E   KG    ++    DR         GA Y    + ++    GR  Q   I   
Sbjct: 225 -----ELCFKG--QKLRRVCWDRF-------PGADYSEVSDVVM--PCGRVLQTAGIH-- 266

Query: 500 FNLPSRFNA----FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN--LPLWLSPI 553
            NL  RF++     Y N  +E  HP +    +   +     + I    G   LP  ++PI
Sbjct: 267 -NLGQRFSSTFDILYANKANESVHPYLTCAGISTRV-LACALSIHGDSGGLVLPPLIAPI 324

Query: 554 QAIVTTITSS----------AVEYAQEIANLLKSH---HLSIETDFRNETINYKIREHSI 600
             ++  I              +    EIA+ LKS     +SI+ DF ++++  K+  + +
Sbjct: 325 HVVIIPIGCGKKNNQESDQQVLGKVNEIADTLKSKLGLRVSIDDDF-SKSMGDKLYYYEL 383

Query: 601 KKIPIIIICGDKE 613
           K +P+ I  G ++
Sbjct: 384 KGVPLRIEVGQRD 396


>gi|328950125|ref|YP_004367460.1| alanyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884]
 gi|328450449|gb|AEB11350.1| alanyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884]
          Length = 896

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 63/245 (25%), Positives = 106/245 (43%), Gaps = 31/245 (12%)

Query: 66  DPRSLAVIR-HSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           DP   A  R H+  H++  A++++  P V+ A   +  D   +DF   +P S +EL +IE
Sbjct: 568 DPARRATERNHTATHLLHAALRAVLGPHVRQAGSLVAPDRLRFDFTHPEPLSLEELERIE 627

Query: 124 KKMQEIIARDSPFLKQYLSHEKARE-----LFESK-KEAYKVEILESIPAKENVTLYRQG 177
           + +   +  D P    Y   E+A+      LF  K  +  +V  +E  P    + L    
Sbjct: 628 RLVNRWVQADFPVTWTYKPLEEAKREGAMALFGEKYADVVRVVSVEGSPDVRGI-LDAPV 686

Query: 178 EWFDLCRGPHVRSTGQVKKFF------------KLMKVAG----AYWRGDSNRPM-LSRI 220
              +LC G HVR TG++  F             ++  + G    A+ RG  NR   L+R 
Sbjct: 687 TSKELCGGCHVRRTGEIGYFVIRSEEALAAGVRRIEALTGEAAVAFARGLLNRTQALARE 746

Query: 221 YGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRK--GWKIFQT 278
            GT   T + + + +  L+E  K   R++ R       A+ G+G     R+  GW+    
Sbjct: 747 LGT---TVEAVPERVQKLQEELKARGREIERLKAELARAQLGTGGKAEAREAGGWRYLAA 803

Query: 279 LISYM 283
            +S +
Sbjct: 804 ELSGL 808


>gi|296454700|ref|YP_003661843.1| prolyl-tRNA synthetase [Bifidobacterium longum subsp. longum
           JDM301]
 gi|296184131|gb|ADH01013.1| prolyl-tRNA synthetase [Bifidobacterium longum subsp. longum
           JDM301]
          Length = 604

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 79/180 (43%), Gaps = 16/180 (8%)

Query: 226 NTQQELTQYLYFLEESEKR---DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISY 282
           NT +  T +L  L E       D  KL +     +I +   G+  W   G ++   + + 
Sbjct: 4   NTLRMSTMFLRTLREDPADADVDSAKLLQRAG--YIRKAAPGIWTWLPLGLRVLNKIEAI 61

Query: 283 MRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           +R +I     +E++ P +L +  ++ +  W+ Y  N+F +K   +       + L P + 
Sbjct: 62  IREEINGIGAQEVHFPALLPREPYEATHRWEEYGDNIFRLKDRHEA-----DYLLAPTHE 116

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNE--PSGSLHGLMRVRGFTQDDAHVFCTKEQ 399
                +      SY++LPV L +  + YR+E  P     GL+R R F   DA+ F   E+
Sbjct: 117 EMFTLLVKDMYSSYKDLPVTLYQIQTKYRDEFRPRA---GLIRGREFIMKDAYSFTIDEE 173


>gi|254505107|ref|ZP_05117258.1| alanyl-tRNA synthetase [Labrenzia alexandrii DFL-11]
 gi|222441178|gb|EEE47857.1| alanyl-tRNA synthetase [Labrenzia alexandrii DFL-11]
          Length = 885

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/167 (25%), Positives = 74/167 (44%), Gaps = 12/167 (7%)

Query: 36  KKAVAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVA 95
           KKA  + ++    D      E ++E+    D RS     H+  H++ EA++ +       
Sbjct: 524 KKADGLFVHVVTVDEGTVTPELALELKVDHDRRSAVRSNHTATHLVHEALREVLGTHVAQ 583

Query: 96  IGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----L 149
            G ++  D   +DF   +P S DELA +E    EII +++    + ++ + A E     L
Sbjct: 584 KGSLVSPDRLRFDFSHPKPMSDDELAIVETFANEIILQNASVETRLMAVDDAIEAGAMAL 643

Query: 150 FESK--KEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQV 194
           F  K  +E   V +  ++   +    Y      +LC G HV+ TG +
Sbjct: 644 FGEKYGEEVRVVSMGTALHGDKTGKPYS----LELCGGTHVKRTGDI 686


>gi|254382091|ref|ZP_04997453.1| prolyl-tRNA synthetase 1 [Streptomyces sp. Mg1]
 gi|194340998|gb|EDX21964.1| prolyl-tRNA synthetase 1 [Streptomyces sp. Mg1]
          Length = 565

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 43/188 (22%), Positives = 82/188 (43%), Gaps = 11/188 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R     ++    +GV  W   G ++   +   +R ++     +E+  P 
Sbjct: 23  DAETLSHKLLVRA---GYVRRSSAGVWTWLPLGKRVLDNVSRVVREEMDAIGAQEVLLPA 79

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++ SG W  Y   +F +K  D    D   + L P +      V      SY++L
Sbjct: 80  LLPKEPYEVSGRWSEYGDLLFRLK--DRKGAD---YLLGPTHEEIFTLVVKDQCTSYKDL 134

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII-SIYKD 417
           PV L +  + YR+E +    G++R R F   D++ F   ++   E   +H      I++ 
Sbjct: 135 PVMLYQIQTKYRDE-ARPRSGVLRGREFQMKDSYSFDVSDEGLAESYALHRAAYRRIFER 193

Query: 418 FGFEKIMV 425
            G +  +V
Sbjct: 194 LGLDHRIV 201


>gi|262279704|ref|ZP_06057489.1| alanyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
 gi|262260055|gb|EEY78788.1| alanyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
          Length = 883

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/177 (23%), Positives = 78/177 (44%), Gaps = 15/177 (8%)

Query: 36  KKAVAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIW-PEVQV 94
           KK+    ++  +  + +   + ++E I   D R      HS  H++  A++ I    VQ 
Sbjct: 528 KKSGGAFVHQGIVTVGNLKADQNVEAIVKADIREATARNHSATHLLHAALRQILGSHVQQ 587

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----L 149
               +  D   +DF  +QP + ++L Q+E+ +   I  ++    + L  E A+      L
Sbjct: 588 KGSLVASDILRFDFANDQPVTFEQLQQVERLVNAEIIANTAVTTELLDIEAAKAKGAMML 647

Query: 150 FESK-KEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAG 205
           F  K     +V  + S+  ++N ++       +LC G HV+ TG +   FK+    G
Sbjct: 648 FGEKYGNEVRVLAMGSVIDEKNFSI-------ELCGGIHVKRTGDI-GLFKITSEGG 696


>gi|153003352|ref|YP_001377677.1| prolyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
 gi|166980097|sp|A7H7J7|SYP_ANADF RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|152026925|gb|ABS24693.1| prolyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
          Length = 575

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 6/103 (5%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           +E   P +    +W++SG W+    NMF +K  D    D   + L   +     A+    
Sbjct: 70  QEFYLPALHPAEIWKESGRWEVMGDNMFRLK--DRKNGD---YCLGMTHEEIFTAIARDE 124

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           L+SYR+LP    +  + +R+EP     GL+RVR FT  DA+ F
Sbjct: 125 LRSYRQLPQVWYQIQTKFRDEPRPK-SGLLRVRQFTMKDAYSF 166


>gi|157962683|ref|YP_001502717.1| prolyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
 gi|189083515|sp|A8H6J5|SYP_SHEPA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|157847683|gb|ABV88182.1| prolyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
          Length = 570

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/148 (22%), Positives = 67/148 (45%), Gaps = 7/148 (4%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I  + SG+  W   G ++ + + + +R ++ K    EI  P V    LW ++G ++ +  
Sbjct: 32  IRRNASGLYSWLPTGLRVLRKIEAIVREEMNKAGSVEILMPMVQPADLWVETGRFEKFGP 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            +   +   +     R F L P +      +    + SY++LP+ L +  + +R+E    
Sbjct: 92  ELLRFQDRHN-----RDFVLGPTHEEVITDIVRKEVNSYKQLPLNLYQIQTKFRDEVRPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             G+MR R F   DA+ F   ++  +E 
Sbjct: 147 F-GVMRSREFLMKDAYSFHIDQETMDET 173


>gi|84515335|ref|ZP_01002697.1| prolyl-tRNA synthetase [Loktanella vestfoldensis SKA53]
 gi|84510618|gb|EAQ07073.1| prolyl-tRNA synthetase [Loktanella vestfoldensis SKA53]
          Length = 446

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/183 (22%), Positives = 80/183 (43%), Gaps = 11/183 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  +G+  W   G+K+ + + + + + + +  +  I  P +    LW++SG +D+Y  
Sbjct: 32  IKQASAGIYSWLPLGFKVLRKIENIVHQEQERAGHIAIQMPTIQSADLWRESGRYDAYGE 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  +K      +  R     P        +F   + SY++LP+ L +    +R+E    
Sbjct: 92  EMLRIKD-----RGGREMLFTPTAEELVTDIFRAHVTSYKDLPLTLYQIQWKFRDEVRPR 146

Query: 377 LHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
             G+MR R F   D + F  TKE   +   +     +  Y+  G + I ++  + P   +
Sbjct: 147 F-GVMRGREFYMKDGYNFDLTKEDALHAYNRHLVSYLRTYERMGLQAIPMRADSGP---I 202

Query: 436 GSD 438
           G D
Sbjct: 203 GGD 205


>gi|313887267|ref|ZP_07820958.1| phosphoribulokinase/uridine kinase family protein [Porphyromonas
           asaccharolytica PR426713P-I]
 gi|312923186|gb|EFR34004.1| phosphoribulokinase/uridine kinase family protein [Porphyromonas
           asaccharolytica PR426713P-I]
          Length = 556

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 44/194 (22%), Positives = 89/194 (45%), Gaps = 3/194 (1%)

Query: 18  PVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIRHS 76
           P  AT   VA+S   +L  + V   +N     L   +RE   +E +   +         S
Sbjct: 18  PPGATLYQVAQSYRNALGFEPVNARVNNLTVALDWRLRESCQVEFVGLTEESGRHTYLRS 77

Query: 77  CAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQIEKKMQEIIARDSP 135
              + A+A+    P   +++   +  G++      ++  + ++LA I++++  +IA D P
Sbjct: 78  LCLLFAKALHDELPHYHLSVRHSLSGGYFSVVRCGDKGITDEQLALIKRRIDHLIAEDLP 137

Query: 136 FLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVK 195
           F ++ +  E+A ++F +  E  KV+++ S   +  VT +    + D   G  + STGQV+
Sbjct: 138 FERRTVPAEEAVQIFTAMGEMDKVDLITS-SGQPYVTYHYLDGYPDNYYGSLLLSTGQVQ 196

Query: 196 KFFKLMKVAGAYWR 209
            +  +  + G   R
Sbjct: 197 LYDLVPYLGGVLIR 210


>gi|84366334|dbj|BAE67492.1| prolyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF 311018]
          Length = 583

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/202 (20%), Positives = 83/202 (41%), Gaps = 14/202 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E   HR + R   +  +A   SG+  W   G ++ + + + +R ++ +    E+  P 
Sbjct: 36  DAELVSHRLMLRAGMIRKLA---SGLYTWSPLGLRVLRKVEAIVREEMDRAGAVEVLFPT 92

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +  + LW  +G W+ +   +  +K   +     + F   P             + SY++L
Sbjct: 93  IQPRELWDATGRWEKFGGQLLKIKDRKE-----QEFCYSPTAEEAAAEFARQEINSYKQL 147

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKD 417
           P+   +  + +R+E      G+MR R F   DA+ F  T   M  E   +      I+  
Sbjct: 148 PLNFYQIQTKFRDEIRPRF-GVMRAREFLMKDAYSFHLTDADMAREYDNMRAAYTRIFTR 206

Query: 418 FGFEKIMVKLSTRPEKRVGSDA 439
            G +   V+  +     +G DA
Sbjct: 207 LGLDFRAVQADS---GAIGGDA 225


>gi|325915741|ref|ZP_08178043.1| prolyl-tRNA synthetase, family II [Xanthomonas vesicatoria ATCC
           35937]
 gi|325538005|gb|EGD09699.1| prolyl-tRNA synthetase, family II [Xanthomonas vesicatoria ATCC
           35937]
          Length = 564

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 52/243 (21%), Positives = 97/243 (39%), Gaps = 15/243 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E   HR + R   +  +A   SG+  W   G ++ + + + +R ++ +    E+  P 
Sbjct: 17  DAELVSHRLMLRAGMIRKLA---SGLYTWSPLGLRVLRKVEAIVREEMNRAGAVEVLFPT 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +  + LW  +G W+ +   +   K +D   +  + F   P             + SY++L
Sbjct: 74  IQPRELWDATGRWEKFGGQLL--KISD---RKQQEFCYSPTAEEAAADFARQEINSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKD 417
           P+   +  + +R+E      G+MR R F   DA+ F  T   M  E   +      I+  
Sbjct: 129 PLNFYQIQTKFRDEIRPRF-GVMRAREFLMKDAYSFHLTDADMAREYDNMRAAYTRIFTR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
            G E   V+  +     +G DA   +   I     D++  S+       V     A  GP
Sbjct: 188 LGLEFRAVQADS---GAIGGDA-SQEFHVIADSGEDSLAFSTASDYAANVETASAALPGP 243

Query: 478 KFE 480
           + E
Sbjct: 244 RPE 246


>gi|23466273|ref|NP_696876.1| prolyl-tRNA synthetase [Bifidobacterium longum NCC2705]
 gi|227546627|ref|ZP_03976676.1| prolyl-tRNA synthetase [Bifidobacterium longum subsp. infantis ATCC
           55813]
 gi|81847214|sp|Q8G3N0|SYP_BIFLO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|23327022|gb|AAN25512.1| prolyl-tRNA synthetase [Bifidobacterium longum NCC2705]
 gi|227212944|gb|EEI80823.1| prolyl-tRNA synthetase [Bifidobacterium longum subsp. infantis ATCC
           55813]
 gi|291516313|emb|CBK69929.1| prolyl-tRNA synthetase, family II [Bifidobacterium longum subsp.
           longum F8]
          Length = 597

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 67/146 (45%), Gaps = 11/146 (7%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
           +I +   G+  W   G ++   + + +R +I     +E++ P +L +  ++ +  W+ Y 
Sbjct: 29  YIRKAAPGIWTWLPLGLRVLNKIEAIIREEINGIGAQEVHFPALLPREPYEATHRWEEYG 88

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE--P 373
            N+F +K   +       + L P +      +      SY++LPV L +  + YR+E  P
Sbjct: 89  DNIFRLKDRHEA-----DYLLAPTHEEMFTLLVKDMYSSYKDLPVTLYQIQTKYRDEFRP 143

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQ 399
                GL+R R F   DA+ F   E+
Sbjct: 144 RA---GLIRGREFVMKDAYSFTIDEE 166


>gi|332299305|ref|YP_004441226.1| phosphoribulose/uridine kinase [Porphyromonas asaccharolytica DSM
           20707]
 gi|332176368|gb|AEE12058.1| phosphoribulose/uridine kinase [Porphyromonas asaccharolytica DSM
           20707]
          Length = 556

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 44/194 (22%), Positives = 89/194 (45%), Gaps = 3/194 (1%)

Query: 18  PVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIRHS 76
           P  AT   VA+S   +L  + V   +N     L   +RE   +E +   +         S
Sbjct: 18  PPGATLYQVAQSYRNALGFEPVNARVNNLTVALDWRLRESCQVEFVGLTEESGRHTYLRS 77

Query: 77  CAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQIEKKMQEIIARDSP 135
              + A+A+    P   +++   +  G++      ++  + ++LA I++++  +IA D P
Sbjct: 78  LCLLFAKALHDELPHYHLSVRHSLSGGYFSVVRCGDKGITDEQLALIKRRIDHLIAEDLP 137

Query: 136 FLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVK 195
           F ++ +  E+A ++F +  E  KV+++ S   +  VT +    + D   G  + STGQV+
Sbjct: 138 FERRTVPAEEAVQIFTAMGEMDKVDLITS-SGQPYVTYHYLDGYPDNYYGSLLLSTGQVQ 196

Query: 196 KFFKLMKVAGAYWR 209
            +  +  + G   R
Sbjct: 197 LYDLVPYLGGVLIR 210


>gi|309775936|ref|ZP_07670928.1| proline--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
 gi|308916218|gb|EFP61966.1| proline--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
          Length = 564

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 37/154 (24%), Positives = 75/154 (48%), Gaps = 15/154 (9%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  SG+      G ++ + +   +R ++     +E+  P ++ + ++++SG  +++ +
Sbjct: 32  IKKSSSGIYMIMPMGKRVLKKIEEIVREEMDAAGAQELLMPAMIPEEIYEKSGRREAFGS 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL----KSYRELPVRLAEFGSVYRNE 372
           NMFA+K   D  +  + + L P     H  +F         SY++ P  L +  + +R+E
Sbjct: 92  NMFALK---DRYQ--KNYVLGPT----HEELFTMAAMMKGSSYKDFPYNLYQIQTKFRDE 142

Query: 373 PSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
            +   +GL+RVR F   DA+ F   E   +E  K
Sbjct: 143 -TRPRYGLIRVREFIMKDAYSFDIDEAGLHESYK 175


>gi|229823364|ref|ZP_04449433.1| hypothetical protein GCWU000282_00662 [Catonella morbi ATCC 51271]
 gi|229787139|gb|EEP23253.1| hypothetical protein GCWU000282_00662 [Catonella morbi ATCC 51271]
          Length = 479

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 59/289 (20%), Positives = 107/289 (37%), Gaps = 50/289 (17%)

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
            AL+P +       F++ ++SYR+LP+ + ++ +V+R E        +R   F   + H 
Sbjct: 100 LALRPTSETIIGDAFSNWIQSYRDLPLEINQWANVFRWEKK--TLPFLRTSEFLWQEGHT 157

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
                Q   E L     ++ IYK+   E ++       EK                G + 
Sbjct: 158 AHADGQ---EALDRTMRMLQIYKEV-VEGVLAVPVVDGEKTPSER---------FAGAVS 204

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS 513
           T    +  +    V  G   + G KF                          F+  Y+N+
Sbjct: 205 TFSIEAMMQDGKAVQAGTSHYMGTKFA-----------------------EAFDIRYLNT 241

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTI-----TSSA 564
            +E    V  H + FG   R IG MI     +    LP  ++P Q +   +       + 
Sbjct: 242 DNEH---VYAHTSSFGVSTRLIGAMIMTHGDDKGLVLPPAVAPTQVVFVPVGPWQKNPAI 298

Query: 565 VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
           ++   E+   LK+  +    D  N +  +K  E  ++ +P+ I CG ++
Sbjct: 299 LDKIHELQAQLKAAGIRCRVDDSNNSPGFKFNEWELRGVPVRIECGPRD 347


>gi|299770946|ref|YP_003732972.1| alanyl-tRNA synthetase [Acinetobacter sp. DR1]
 gi|298701034|gb|ADI91599.1| alanyl-tRNA synthetase [Acinetobacter sp. DR1]
          Length = 883

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/177 (23%), Positives = 78/177 (44%), Gaps = 15/177 (8%)

Query: 36  KKAVAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIW-PEVQV 94
           KK+    ++  +  + +   + ++E I   D R      HS  H++  A++ I    VQ 
Sbjct: 528 KKSGGAFVHQGIVTVGNLKADQNVEAIVKADIREATARNHSATHLLHAALRQILGSHVQQ 587

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----L 149
               +  D   +DF  +QP + ++L Q+E+ +   I  ++    + L  E A+      L
Sbjct: 588 KGSLVASDILRFDFANDQPVTFEQLQQVERLVNAEIIANTAVTTELLDIEAAKAKGAMML 647

Query: 150 FESK-KEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAG 205
           F  K     +V  + S+  ++N ++       +LC G HV+ TG +   FK+    G
Sbjct: 648 FGEKYGNEVRVLAMGSVIDEKNFSI-------ELCGGIHVKRTGDI-GLFKITSEGG 696


>gi|198275270|ref|ZP_03207801.1| hypothetical protein BACPLE_01429 [Bacteroides plebeius DSM 17135]
 gi|198271853|gb|EDY96123.1| hypothetical protein BACPLE_01429 [Bacteroides plebeius DSM 17135]
          Length = 496

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 64/290 (22%), Positives = 120/290 (41%), Gaps = 54/290 (18%)

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           + + + + SYR+LP+   ++ +V R E    L   +R   F   + H   T      E  
Sbjct: 133 STYKNWINSYRDLPILCNQWANVMRWEMRTRL--FLRTAEFLWQEGH---TAHATREEAE 187

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
                ++ +Y DF  EK M                   A  ++KGV      S+ +R   
Sbjct: 188 AEAQKMLHVYGDFA-EKYM-------------------AVPVIKGV-----KSANERF-- 220

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIH 524
                 GA      E +++D  G+  QCGT   +  N    FN  +V+ +++  +   + 
Sbjct: 221 -----AGALDTYTIEGLMQD--GKALQCGTSHFLGQNFAKAFNVQFVDKNNKLDY---VW 270

Query: 525 RAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTITSSAVEYAQ------EIANL 574
              +G   R +G +I     +    LP  L+PIQ ++  I  +  +  Q       I N 
Sbjct: 271 ATSWGVSTRLMGALIMTHSDDNGLVLPPHLAPIQVVIVPIYKNDEQLKQIDAKVEGIVNK 330

Query: 575 LKSHHLSIETD-FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRR 623
           L+S  +S++ D   N+   +K  ++ +K +P+ ++ G ++    ++ I R
Sbjct: 331 LRSMGISVKYDNADNKRPGFKFADYELKGVPVRLVMGGRDLENNTMEIMR 380


>gi|269303377|gb|ACZ33477.1| prolyl-tRNA synthetase [Chlamydophila pneumoniae LPCoLN]
          Length = 568

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 37/173 (21%), Positives = 80/173 (46%), Gaps = 9/173 (5%)

Query: 255 LFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDS 313
           LF +++   GV  +    W++   +++ +R ++     +E+  P + +  LWQ +G W++
Sbjct: 32  LFKVSK---GVYTYTPLLWRVVSKMMNIIREELNAIGGQELLLPLLHNAELWQHTGRWEA 88

Query: 314 YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP 373
           + +        D   ++ ++  L P +     +     L S R+LP+ L +  + +R+E 
Sbjct: 89  FTSEGLLYTLKD---REGKSHCLAPTHEEVICSFVAQWLSSKRQLPLHLYQIATKFRDEI 145

Query: 374 SGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
                GL+R R    +D++ F  + EQM  +  K+ +    I+   G    +V
Sbjct: 146 RPRF-GLIRSRELLMEDSYTFSDSPEQMNEQYEKLRSGYSKIFDRLGLAYAIV 197


>gi|259416086|ref|ZP_05740006.1| prolyl-tRNA synthetase [Silicibacter sp. TrichCH4B]
 gi|259347525|gb|EEW59302.1| prolyl-tRNA synthetase [Silicibacter sp. TrichCH4B]
          Length = 451

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/201 (20%), Positives = 85/201 (42%), Gaps = 14/201 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           E++   HR + R      I +  +G+  W   G+++ + +   +   +++  +  +  P 
Sbjct: 17  EAQVVSHRYMLRAG---MIKQSAAGIYSWLPLGYRVLKKIEGIVHEEQMRAGHIPMLMPT 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW++SG +D+Y   M  ++   D     R     P        +F   + SY++L
Sbjct: 74  IQSADLWRESGRYDAYGEEMLRIRDRHD-----RDMLFTPTAEELITDIFRSNVSSYKDL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKD 417
           P+ + +    +R+E      G+MR R F   D + F  TKE   +   +     +  Y+ 
Sbjct: 129 PLTMYQIQWKFRDEIRPRF-GVMRGREFYMKDGYNFDLTKEDALHAYNRHLVTYLRTYER 187

Query: 418 FGFEKIMVKLSTRPEKRVGSD 438
            G + I ++    P   +G D
Sbjct: 188 MGLQAIPMRADGGP---IGGD 205


>gi|219681610|ref|YP_002467996.1| prolyl-tRNA synthetase [Buchnera aphidicola str. 5A (Acyrthosiphon
           pisum)]
 gi|219682167|ref|YP_002468551.1| prolyl-tRNA synthetase [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|257471296|ref|ZP_05635295.1| prolyl-tRNA synthetase [Buchnera aphidicola str. LSR1
           (Acyrthosiphon pisum)]
 gi|254782890|sp|B8D937|SYP_BUCA5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|254782891|sp|B8D7E1|SYP_BUCAT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|219621900|gb|ACL30056.1| prolyl-tRNA synthetase [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|219624453|gb|ACL30608.1| prolyl-tRNA synthetase [Buchnera aphidicola str. 5A (Acyrthosiphon
           pisum)]
 gi|311086555|gb|ADP66636.1| prolyl-tRNA synthetase [Buchnera aphidicola str. TLW03
           (Acyrthosiphon pisum)]
 gi|311087136|gb|ADP67216.1| prolyl-tRNA synthetase [Buchnera aphidicola str. JF99
           (Acyrthosiphon pisum)]
 gi|311087672|gb|ADP67751.1| prolyl-tRNA synthetase [Buchnera aphidicola str. JF98
           (Acyrthosiphon pisum)]
          Length = 572

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/171 (23%), Positives = 77/171 (45%), Gaps = 8/171 (4%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  SG+  W   G ++ + + + +  ++ K +  EI  P +  ++LW++SG     R 
Sbjct: 32  IRKTSSGLYVWLPTGMRVLKKIKNIITTEMEKINALEILMPIIQPEYLWKESG-----RL 86

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
           N++  +      +    F L P N           + SY++LP+ + +  + +R+E    
Sbjct: 87  NLYGEELLRFLDRRKNQFILGPTNEEVVTNFIGSEIHSYKQLPLTVYQIQTKFRDEIRPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMF-NECLKIHNLIISIYKDFGFEKIMVK 426
             G++R R FT  DA+ F   +    N   K ++  I+I+K        VK
Sbjct: 147 F-GIIRTREFTMKDAYSFHINQSCLENTYNKFYDSYINIFKKMNLNFCAVK 196


>gi|116252382|ref|YP_768220.1| alanyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae 3841]
 gi|205830192|sp|Q1MFZ9|SYA_RHIL3 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|115257030|emb|CAK08124.1| putative alanyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 884

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 80/184 (43%), Gaps = 25/184 (13%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKM 126
           RS     HS  H++ EA++ +        G ++  +   +D    +P S++EL  +E   
Sbjct: 555 RSRLRANHSATHLLHEALREVLGTHVAQKGSLVAPERLRFDVSHPKPMSAEELKIVEDMA 614

Query: 127 QEIIARDSPFLKQYLS-----HEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF- 180
            EI+ ++SP   + +S      E A  LF    E Y  E+   +   E V   + G+ + 
Sbjct: 615 NEIVLQNSPVTTRLMSVDDAIAEGAMALF---GEKYGDEV-RVVAMGEGVRGAKAGKPYS 670

Query: 181 -DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            +LC G HV +TGQ+     L++V G    G   R    RI      + +E     Y  E
Sbjct: 671 IELCGGTHVGATGQI----GLIRVLGESAVGAGVR----RIEAVTGESARE-----YLAE 717

Query: 240 ESEK 243
           + E+
Sbjct: 718 QDER 721


>gi|99081693|ref|YP_613847.1| prolyl-tRNA synthetase [Ruegeria sp. TM1040]
 gi|122984229|sp|Q1GFI1|SYP_SILST RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|99037973|gb|ABF64585.1| prolyl-tRNA synthetase [Ruegeria sp. TM1040]
          Length = 451

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/201 (20%), Positives = 85/201 (42%), Gaps = 14/201 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           E++   HR + R      I +  +G+  W   G+++ + +   +   +++  +  +  P 
Sbjct: 17  EAQVVSHRYMLRAG---MIKQSAAGIYSWLPLGYRVLKKIEGIVHEEQMRAGHIPMLMPT 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW++SG +D+Y   M  ++   D     R     P        +F   + SY++L
Sbjct: 74  IQSADLWRESGRYDAYGEEMLRIRDRHD-----RDMLFTPTAEELITDIFRANVSSYKDL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKD 417
           P+ + +    +R+E      G+MR R F   D + F  TKE   +   +     +  Y+ 
Sbjct: 129 PLTMYQIQWKFRDEIRPRF-GVMRGREFYMKDGYNFDLTKEDALHAYNRHLVTYLRTYER 187

Query: 418 FGFEKIMVKLSTRPEKRVGSD 438
            G + I ++    P   +G D
Sbjct: 188 MGLQAIPMRADGGP---IGGD 205


>gi|255918003|pdb|3IAL|A Chain A, Giardia Lamblia Prolyl-Trna Synthetase In Complex With
           Prolyl-Adenylate
 gi|255918004|pdb|3IAL|B Chain B, Giardia Lamblia Prolyl-Trna Synthetase In Complex With
           Prolyl-Adenylate
          Length = 518

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 79/373 (21%), Positives = 151/373 (40%), Gaps = 75/373 (20%)

Query: 271 KGWKIFQTLISYMRRKI----KDDYEEINTPQVL------DQHLWQQSGHWDSYRANMFA 320
           KG  +F+    +M   I    +++Y ++   Q+L      +  L ++S H   + A  F 
Sbjct: 45  KGCVVFRPYGFFMENAIMRLCEEEYAKVGISQILFPTVIPESFLKKESDHIKGFEAECFW 104

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           V+       + R  AL+P +     ++F+  ++SY++LP+++ +  +++R+E   +   L
Sbjct: 105 VEKGGLQPLEER-LALRPTSETAIYSMFSKWVRSYKDLPLKIHQTCTIFRHETKNT-KPL 162

Query: 381 MRVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDA 439
           +RVR    ++AH    T E   ++      +I +I+ D                      
Sbjct: 163 IRVREIHWNEAHCCHATAEDAVSQLSDYWKVIDTIFSD---------------------- 200

Query: 440 LWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVD 499
                E   KG    ++    DR         GA Y    + ++    GR  Q   I   
Sbjct: 201 -----ELCFKG--QKLRRVCWDRF-------PGADYSEVSDVVM--PCGRVLQTAGIH-- 242

Query: 500 FNLPSRFNA----FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN--LPLWLSPI 553
            NL  RF++     Y N  +E  HP +    +   +     + I    G   LP  ++PI
Sbjct: 243 -NLGQRFSSTFDILYANKANESVHPYLTCAGISTRV-LACALSIHGDSGGLVLPPLIAPI 300

Query: 554 QAIVTTITSS----------AVEYAQEIANLLKSH---HLSIETDFRNETINYKIREHSI 600
             ++  I              +    EIA+ LKS     +SI+ DF ++++  K+  + +
Sbjct: 301 HVVIIPIGCGKKNNQESDQQVLGKVNEIADTLKSKLGLRVSIDDDF-SKSMGDKLYYYEL 359

Query: 601 KKIPIIIICGDKE 613
           K +P+ I  G ++
Sbjct: 360 KGVPLRIEVGQRD 372


>gi|317013684|gb|ADU81120.1| prolyl-tRNA synthetase [Helicobacter pylori Gambia94/24]
          Length = 577

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/180 (23%), Positives = 78/180 (43%), Gaps = 11/180 (6%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           + H+ LA+   ++ +   GSG+  +     K+   + +   +++++   + I    V+  
Sbjct: 21  KSHKHLAQAGYIYQV---GSGIYNFLPLAKKVLDKIENVTHKRMQEHGAQNILMSFVVLA 77

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SG  D Y   +   K   D       F L P        +  + +KSY++LPV L
Sbjct: 78  SLWEKSGRLDKYGKELLVFKDRKDN-----DFVLSPTLEENITEIAANFIKSYKQLPVHL 132

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT-KEQMFNECLKIHNLIISIYKDFGFE 421
            +  + +R+E      GL+R R F   D + F    E +  E L + +    I  D G +
Sbjct: 133 YQIHTKFRDEIRPRF-GLVRAREFIMKDGYSFHEDTESLGEEFLNMQSAYKEILSDLGLD 191


>gi|224025842|ref|ZP_03644208.1| hypothetical protein BACCOPRO_02584 [Bacteroides coprophilus DSM
           18228]
 gi|224019078|gb|EEF77076.1| hypothetical protein BACCOPRO_02584 [Bacteroides coprophilus DSM
           18228]
          Length = 521

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 64/291 (21%), Positives = 123/291 (42%), Gaps = 56/291 (19%)

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNEC 404
           + + + + SYR+LP+   ++ +V R E    L   +R   F   + H    T+E+   E 
Sbjct: 158 STYKNWINSYRDLPILCNQWANVMRWEMRTRL--FLRTAEFLWQEGHTAHATREEAETEA 215

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            K    ++ +Y DF  EK M                   A  ++KGV      S+ +R  
Sbjct: 216 QK----MLHVYGDFA-EKYM-------------------AVPVIKGV-----KSANERF- 245

Query: 465 TGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMI 523
                  GA      E +++D  G+  QCGT   +  N    FN  +V+ +++  +   +
Sbjct: 246 ------AGALDTYTIEGLMQD--GKALQCGTSHFLGQNFAKAFNVQFVDKNNKLDY---V 294

Query: 524 HRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTITSSAVEYAQEIANL----- 574
               +G   R +G +I     +    LP  L+PIQ ++  I  +  +  Q  A +     
Sbjct: 295 WATSWGVSTRLMGALIMTHSDDNGLVLPPHLAPIQVVIVPIYKNDEQLKQIDAKVEGIVA 354

Query: 575 -LKSHHLSIETD-FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRR 623
            L+   +S++ D   N+   +K  ++ +K +P+ ++ G ++    ++ I R
Sbjct: 355 KLRELGISVKYDNADNKRPGFKFADYELKGVPVRLVMGGRDLENNTMEIMR 405


>gi|169836892|ref|ZP_02870080.1| prolyl-tRNA synthetase [candidate division TM7 single-cell isolate
           TM7a]
          Length = 568

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 78/165 (47%), Gaps = 9/165 (5%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           IA++ +GV  +   G K+ + + S +R ++ K   +E+    +  + +W+++  W+    
Sbjct: 32  IAKEMAGVYAFLPLGLKVVENIKSIVREEMNKIGSKELLMTNLQRKEVWEKTNRWNDNIV 91

Query: 317 NM-FAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
           ++ F  K  DDT   L     +P+     V +    ++SY++LPV + +F +  RNE   
Sbjct: 92  DIWFKTKLKDDTEVGLGWSHEEPI-----VNMMRQFIRSYKDLPVSVYQFQNKMRNELRA 146

Query: 376 SLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFG 419
              G+MR R F   D + F  TKE +     K+       Y+  G
Sbjct: 147 K-SGIMRGREFVMKDMYSFHATKEDLEEYYHKVMEAYEQCYRRLG 190


>gi|146420078|ref|XP_001485997.1| hypothetical protein PGUG_01668 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 526

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/162 (22%), Positives = 71/162 (43%), Gaps = 33/162 (20%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDS---YRAN-- 317
           G++ W   GW + + L + + R  +    EE+N   +    LW ++G W++   ++ N  
Sbjct: 41  GLVHWMPPGWNMVRKLQTIIHRHMVGAGAEEVNLSLLSSAELWNKTGRWENNELFKLNDG 100

Query: 318 --MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE--P 373
               A  C ++  +                 +  + + SY+ LP+   +    YR+E  P
Sbjct: 101 ETCLAATCEEEITQ-----------------LVKNQIASYKSLPLLYYQIKEKYRDEKRP 143

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
            G   GL+R R F   DA+ F   E++    ++ +N +++ Y
Sbjct: 144 RG---GLLRGREFLMKDAYSFDIDEKL---AMETYNTVVNAY 179


>gi|159184958|ref|NP_354854.2| alanyl-tRNA synthetase [Agrobacterium tumefaciens str. C58]
 gi|22096194|sp|Q8UE87|SYA_AGRT5 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|159140236|gb|AAK87639.2| alanyl-tRNA synthetase [Agrobacterium tumefaciens str. C58]
          Length = 887

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/145 (24%), Positives = 65/145 (44%), Gaps = 12/145 (8%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSS 116
           ++++    D RS     HS  H++ EA++ +        G ++  +   +D    +P S+
Sbjct: 547 AVQLTVDHDRRSRLRANHSATHLLHEALREVLGTHVAQKGSLVAPERLRFDVSHPKPMSA 606

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLS-----HEKARELFESK--KEAYKVEILESIPAKE 169
           +EL  +E    EI+ ++SP + + +S      E A  LF  K   E   V +   +   +
Sbjct: 607 EELKVVEDMANEIVLQNSPVVTRLMSVDDAIAEGAMALFGEKYGDEVRVVSMGTGLHGAK 666

Query: 170 NVTLYRQGEWFDLCRGPHVRSTGQV 194
               Y      +LC G HV +TGQ+
Sbjct: 667 ANRPYS----VELCGGTHVAATGQI 687


>gi|309389227|gb|ADO77107.1| prolyl-tRNA synthetase [Halanaerobium praevalens DSM 2228]
          Length = 568

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/170 (22%), Positives = 78/170 (45%), Gaps = 8/170 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  +   G+K+ + +    R+ + + + +E+  P + D  +W+ S  WD +   M  
Sbjct: 36  ASGIYSYLPLGYKVIKKIEKIARKHMDNSEAQEVLLPIMQDSQIWKDSKRWDKFGPLM-- 93

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +K  D   +  R F L P +      +    ++SY++LP+ L +  +  R+E      G+
Sbjct: 94  IKFND---RKNREFCLGPTHEEVVTDLVRDEVRSYKDLPLNLYQIQTKVRDEIRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDFGFEKIMVKLST 429
           MR R F   DA+         ++  + +++    I+ + G E + V+  T
Sbjct: 150 MRGREFIMKDAYSLDIDSAGLDKSYQAMYDAYEKIFAECGLEAVSVEADT 199


>gi|254436958|ref|ZP_05050452.1| alanyl-tRNA synthetase [Octadecabacter antarcticus 307]
 gi|198252404|gb|EDY76718.1| alanyl-tRNA synthetase [Octadecabacter antarcticus 307]
          Length = 884

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/143 (23%), Positives = 62/143 (43%), Gaps = 5/143 (3%)

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPI-IEDGFYYDFDKEQPFSSDE 118
           E++     RS     HS  H++ EA++    +  V  G +   D   +DF      ++ E
Sbjct: 547 ELVVDHAQRSAIRANHSATHLLNEALRVALGDHVVQRGSLNAADRLRFDFTHTSCMTAVE 606

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFE----SKKEAYKVEILESIPAKENVTLY 174
           LAQ+E  +   + +++    + ++ + AR L       +K   +V ++    A     + 
Sbjct: 607 LAQVEHDVNHYVQQNTTVSTRIMTPDDARALGAQAQFGEKYGDEVRVVSMGRANTGKGVD 666

Query: 175 RQGEWFDLCRGPHVRSTGQVKKF 197
           RQ    +LC G HV  TG +  F
Sbjct: 667 RQTYSLELCGGTHVARTGDIGMF 689


>gi|329118470|ref|ZP_08247175.1| proline--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
 gi|327465411|gb|EGF11691.1| proline--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
          Length = 571

 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 60/138 (43%), Gaps = 7/138 (5%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I  + SG+  W   G ++ + +   +R ++ +    E+  P V    LWQ+SG W+ Y  
Sbjct: 32  IKANASGLYTWMPMGLRVLRKVERVVREEMERAGSVELLMPVVQPAELWQESGRWEFYGK 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            +  +K   +     R F + P        +    + SY++LP       + +R+E    
Sbjct: 92  ELLRLKDRHE-----RDFCMGPTCEEVITDIVRKEITSYKQLPKNFYHIQTKFRDEVRPR 146

Query: 377 LHGLMRVRGFTQDDAHVF 394
             G+MR R F   DA+ F
Sbjct: 147 F-GVMRAREFVMKDAYSF 163


>gi|270284377|ref|ZP_05966008.2| proline--tRNA ligase [Bifidobacterium gallicum DSM 20093]
 gi|270276752|gb|EFA22606.1| proline--tRNA ligase [Bifidobacterium gallicum DSM 20093]
          Length = 602

 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 34/144 (23%), Positives = 64/144 (44%), Gaps = 11/144 (7%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK 322
           G+  W   G  +   + + +R ++     +E++ P +L +  ++ +  W+ Y  N+F +K
Sbjct: 42  GIWTWLPLGLSVLNKIEAIIREEMNGIGAQEVHFPALLPRAPYEATHRWEEYGENLFRLK 101

Query: 323 CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE--PSGSLHGL 380
              +       + L P +      +      SY++LPV L +  + YR+E  P     GL
Sbjct: 102 DRHEA-----DYLLAPTHEEMFTLLVKDMYSSYKDLPVTLYQIQTKYRDEFRPRA---GL 153

Query: 381 MRVRGFTQDDAHVFCTKEQMFNEC 404
           +R R F   DA+ F   E+    C
Sbjct: 154 IRGREFIMKDAYSFTLDEEGMKRC 177


>gi|206602304|gb|EDZ38785.1| Alanyl-tRNA synthetase [Leptospirillum sp. Group II '5-way CG']
          Length = 891

 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 91/206 (44%), Gaps = 21/206 (10%)

Query: 41  VAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPI 99
           + + G+V      V E +I+    E+ R  +   H+  H++  A++++  E V+ A   +
Sbjct: 532 IVLAGEVVSGKVSVGE-TIDQHVDEEARQGSERHHTATHLLHAALRTVLGEQVRQAGSLV 590

Query: 100 IEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKAREL----FESKKE 155
             +   +DF   QP S + L  +E  +   I R+SP   + +   KA ++    F  +K 
Sbjct: 591 APERLRFDFTCPQPVSPENLLAVEALVNGWIFRNSPVDAREMEKSKALDMGALAFFDEKY 650

Query: 156 AYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMK--VAGAYWRGDSN 213
             +V +++ +P          G   +LC G HVRSTGQ+     L +  VA    R ++ 
Sbjct: 651 GDRVRVVQ-VP----------GTSVELCGGTHVRSTGQIGSLLILQETGVAAGIRRIEAV 699

Query: 214 RPMLSRIYGTAWNTQQELTQYLYFLE 239
              L+      W  +QEL      LE
Sbjct: 700 AGPLAYQKAVTW--RQELKGLRELLE 723


>gi|167624874|ref|YP_001675168.1| prolyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
 gi|189083514|sp|B0TNJ5|SYP_SHEHH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|167354896|gb|ABZ77509.1| prolyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
          Length = 570

 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 34/148 (22%), Positives = 67/148 (45%), Gaps = 7/148 (4%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I  + SG+  W   G ++ + + + +R ++ K    EI  P V    LW ++G ++ +  
Sbjct: 32  IRRNASGLYSWLPTGLRVLRKIEAIVREEMNKAGSVEILMPMVQPADLWVETGRFEKFGP 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            +   +   +     R F L P +      +    + SY++LP+ L +  + +R+E    
Sbjct: 92  ELLRFQDRHN-----RDFVLGPTHEEVITDIVRKEVNSYKQLPLNLYQIQTKFRDEVRPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             G+MR R F   DA+ F   ++  +E 
Sbjct: 147 F-GVMRSREFLMKDAYSFHIDQETMDET 173


>gi|76613805|ref|XP_585755.2| PREDICTED: hypothetical protein [Bos taurus]
 gi|297473149|ref|XP_002686423.1| PREDICTED: hypothetical protein [Bos taurus]
 gi|296489106|gb|DAA31219.1| hypothetical protein BOS_3571 [Bos taurus]
          Length = 475

 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 97/441 (21%), Positives = 166/441 (37%), Gaps = 74/441 (16%)

Query: 210 GDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD----HRKLAREMDLFHIAEDGSGV 265
           G   R MLSR++       Q+L +      E    D     ++L  +M L H A  G   
Sbjct: 35  GRGKRLMLSRMF-----QPQKLREDQVLSLEGRSGDLTCKSQRLMLQMGLIHPASPGC-- 87

Query: 266 IFWHRKGWKI--FQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK 322
             +H   + +   + L+  + ++++    +++N P +    LW+ +  WDS    +  ++
Sbjct: 88  --YHLLPYTVRAMEKLVRVIDQEMQTIGGQKVNMPSLSPAELWRATKRWDSMGRELLRLR 145

Query: 323 CADDTIKDLRTFALKPMNCPGHVA-VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
             D   KD   + L P +     A V +    SY++LP  L +    +R+EP     GL+
Sbjct: 146 --DRHGKD---YCLGPTHEEAITALVASQKTLSYKQLPFLLYQVTRKFRDEPRPRF-GLL 199

Query: 382 RVRGFTQDDAHVFCTKEQ---------------MFNECLKIHNLIISIYKDFGFEKIMVK 426
           R R F   D + F +  +               +FN   ++    I +  D G    MV 
Sbjct: 200 RGREFYMKDMYTFDSSPEAAQLTYSLVCDAYSSLFN---RLGLRCIKVQADVGSIGGMVS 256

Query: 427 LSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDA 486
              +    VG D L           ++T+ +S   R N        A  GP  E      
Sbjct: 257 HEFQLPVDVGEDRLVVCPSCHFSANMETLDSS---RTNC------PACQGPLTE-TKGIE 306

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG-SIERFIGIMIENFKG- 544
           +G  +  GT        S FNA ++N H +   P +     +G  + R +   IE     
Sbjct: 307 VGHTFYLGT-----KYSSIFNAQFINVHGK---PSLAEMGCYGLGVTRILAAAIEVLSTE 358

Query: 545 ---NLPLWLSPIQ-AIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE---------TI 591
                P  L+P Q  ++     S  E A E+A  L +H        + E         TI
Sbjct: 359 DCVRWPGLLAPYQVCLIPPKKGSKEEAAAELAGDLYNHITEAVPQLQGEVLLDDRTHLTI 418

Query: 592 NYKIREHSIKKIPIIIICGDK 612
             ++++ +    P +II   +
Sbjct: 419 GNRLKDANKLGYPFVIIAAKR 439


>gi|71394075|gb|AAZ32114.1| prolyl-tRNA synthetase [uncultured euryarchaeote Alv-FOS5]
          Length = 472

 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 79/384 (20%), Positives = 155/384 (40%), Gaps = 57/384 (14%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHLWQQSG-HWDSYRANMFAV 321
           G++ W   G+KI + +   +R  +++  ++E+  P ++ +    + G H   + + ++ +
Sbjct: 30  GMLVWRPNGFKIRKYVTDLLRELLEETGHQEVLFPTLIPETALNKEGEHIRGFGSEVYWI 89

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
               +T  D++  AL+P +      +F   ++S+ +LP+R+ +  SV+R E +     L+
Sbjct: 90  THGGETPLDVK-LALRPTSETAMYPMFALWIRSHADLPLRVFQIVSVFRYE-TKHTRPLI 147

Query: 382 RVRGF-TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           RVR   T  +AH     E+   E  K   +I  +YK                      A 
Sbjct: 148 RVREVSTFKEAHCALKTEE---EAEKEMRIIDGVYK----------------------AF 182

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDF 500
           WD+    +      ++  S D+         GA     ++ I+    GR  Q  T     
Sbjct: 183 WDE----LGIPFVRVQRPSWDKFA-------GADKTIAYDTIM--PTGRTLQIAT---SH 226

Query: 501 NLPSRFN-AFYVNSHSEKCHPVMIHRAVFGSIER----FIGIMIENFKGNLPLWLSPIQA 555
            L  +F+  F V    E     + +    G  ER     +GI  +N    LP   +P+Q 
Sbjct: 227 RLSQKFSEVFDVKYEDENGEQKLAYLTSHGISERAIAALVGIHGDNRGLVLPPRFAPVQV 286

Query: 556 IVTTI-----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           ++  I      +  +E A E+   LK ++  +E D  +     K     ++ +PI I  G
Sbjct: 287 VIVPILYKGKENQVMEKAMEVYEKLK-YNWRVELDDSDSNPGDKFYYWELRGVPIRIEIG 345

Query: 611 DKEASERSIGIRRFGSTTTQKVSL 634
            ++     + + R  +    +V +
Sbjct: 346 PRDVENGVVTLARRDTKEKTQVKM 369


>gi|291457352|ref|ZP_06596742.1| proline--tRNA ligase [Bifidobacterium breve DSM 20213]
 gi|291381187|gb|EFE88705.1| proline--tRNA ligase [Bifidobacterium breve DSM 20213]
          Length = 597

 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 66/146 (45%), Gaps = 11/146 (7%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
           +I +   G+  W   G K+   +   +R +I     +E++ P +L +  ++ +  W+ Y 
Sbjct: 29  YIRKAAPGIWTWLPLGLKVLNKIEDIIREEINGIGAQEVHFPALLPREPYEATHRWEEYG 88

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE--P 373
            N+F +K   +       + L P +      +      SY++LPV L +  + YR+E  P
Sbjct: 89  DNIFRLKDRHEA-----DYLLAPTHEEMFTLLVKDMYSSYKDLPVTLYQIQTKYRDEFRP 143

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQ 399
                GL+R R F   DA+ F   E+
Sbjct: 144 RA---GLIRGREFIMKDAYSFTIDEE 166


>gi|222094191|ref|YP_002528248.1| prolyl-tRNA synthetase [Bacillus cereus Q1]
 gi|221238246|gb|ACM10956.1| proline--tRNA ligase (prolyl-tRNA synthetase) [Bacillus cereus Q1]
          Length = 476

 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 83/396 (20%), Positives = 151/396 (38%), Gaps = 61/396 (15%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAV 321
           G +     G+ +++ +   M  K+K   +E +  P  + + L Q +  H + +   +  V
Sbjct: 37  GCMILRPYGYALWENMQKVMDEKLKATGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWV 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
               D  K      ++P +       F+  ++SY +LP    ++ SV R E +      +
Sbjct: 97  THGGDE-KLAERLCIRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKT--TRPFL 153

Query: 382 RVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           R   F   + H +  T E+   E L I NL  S  +D+    ++    T  EK  G+ A 
Sbjct: 154 RTTEFLWQEGHTIHETAEESQAETLNILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKAT 213

Query: 441 WDDAENIMKGVLDTIKNSSQD--RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
                        TI++   D   + TG     G  +   F+    D  G+ WQ      
Sbjct: 214 ------------HTIESLMHDGKALQTGTSHNFGTNFSEAFDIKFLDRNGK-WQ------ 254

Query: 499 DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQ 554
                                   +H+  +G   R IG +I     N    +P  ++P+Q
Sbjct: 255 -----------------------YVHQTSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQ 291

Query: 555 AIVTTITSSAVEYAQEIANLLKSH---HLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
            ++  I     E     A  L+ H      ++ D  N+T  +K  E+ +K IPI +  G 
Sbjct: 292 VVIVPIAQHK-EGVLAKATELQGHIQKVARVKIDASNKTPGWKFNEYEMKGIPIRLEVGP 350

Query: 612 KEASERSIGIRRFGSTTTQKVS---LLDAIPILTKE 644
           K+  +  + + R  +   + ++   L + IP L +E
Sbjct: 351 KDIEKNQVVLVRRDTKEKEFIAMDQLEERIPALLEE 386


>gi|83951874|ref|ZP_00960606.1| alanyl-tRNA synthetase [Roseovarius nubinhibens ISM]
 gi|83836880|gb|EAP76177.1| alanyl-tRNA synthetase [Roseovarius nubinhibens ISM]
          Length = 888

 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 65/132 (49%), Gaps = 6/132 (4%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPI-IEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++ EA+++   +     G +  ED   +DF   +  S+DEL Q+ +++ E I ++
Sbjct: 563 HSATHLLHEALRNALGDHVAQRGSLNAEDRLRFDFSHSKAMSADELDQVAREVNEYIRQN 622

Query: 134 SPFLKQYLSHEKARELFESK--KEAYKVEI-LESIPAKENVTLYRQGEWF--DLCRGPHV 188
           +    + ++ + AR++       E Y  E+ + S+ + +       G  +  +LC G HV
Sbjct: 623 TRVETRIMTPDDARDIGAQALFGEKYGDEVRVVSMGSLDGSGKGLDGTTYSIELCGGTHV 682

Query: 189 RSTGQVKKFFKL 200
           R TG +  F  L
Sbjct: 683 RQTGDIGMFVIL 694


>gi|77164414|ref|YP_342939.1| prolyl-tRNA synthetase [Nitrosococcus oceani ATCC 19707]
 gi|254434306|ref|ZP_05047814.1| prolyl-tRNA synthetase [Nitrosococcus oceani AFC27]
 gi|114152222|sp|Q3JCN7|SYP_NITOC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|76882728|gb|ABA57409.1| Prolyl-tRNA synthetase [Nitrosococcus oceani ATCC 19707]
 gi|207090639|gb|EDZ67910.1| prolyl-tRNA synthetase [Nitrosococcus oceani AFC27]
          Length = 574

 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 40/187 (21%), Positives = 80/187 (42%), Gaps = 13/187 (6%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-K 288
           +QYL         D   ++ ++ L    I    +G+  W   G ++ + + + +R ++ K
Sbjct: 4   SQYLLTTTRETPADAEIISHQLMLRGSFIRRLAAGLYTWLPLGLRVLRKVENIIREEMDK 63

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
              +E+  P V    LW+++G W+ Y   +        T +  R F   P +      + 
Sbjct: 64  AGAQEVLMPAVQPAELWRETGRWEQYGPELLRF-----TDRHQRFFCFGPTHEEVITDLI 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF----CTKEQMFNEC 404
              ++SY++LP    +    +R+E      G+MR R F   DA+ F     +  Q +N+ 
Sbjct: 119 RREIRSYKQLPANFYQIQLKFRDEIRPRF-GVMRSREFLMKDAYSFHPDQTSLAQTYNQM 177

Query: 405 LKIHNLI 411
            + ++ I
Sbjct: 178 YETYSRI 184


>gi|308063100|gb|ADO04987.1| prolyl-tRNA synthetase [Helicobacter pylori Sat464]
          Length = 577

 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 42/180 (23%), Positives = 78/180 (43%), Gaps = 11/180 (6%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           + H+ LA+   ++ +   GSG+  +     K+   + +   +++++   + I    V+  
Sbjct: 21  KSHKHLAQAGYIYQV---GSGIYNFLPLAKKVLDKIENITHKRMQEHGAQNILMSFVVLA 77

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SG  D Y   +   K   D       F L P        + ++ +KSY++LPV L
Sbjct: 78  SLWEKSGRLDKYGKELLVFKDRKDN-----DFVLSPTLEENITEIASNFIKSYKQLPVHL 132

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT-KEQMFNECLKIHNLIISIYKDFGFE 421
            +  + +R+E      GL+R R F   D + F    E +  E L   +    I  D G +
Sbjct: 133 YQIHTKFRDEIRPRF-GLVRAREFIMKDGYSFHEDAESLDKEFLNTQSAYKEILSDLGLD 191


>gi|261837685|gb|ACX97451.1| prolyl-tRNA synthetase [Helicobacter pylori 51]
          Length = 577

 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 42/180 (23%), Positives = 78/180 (43%), Gaps = 11/180 (6%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           + H+ LA+   ++ +   GSG+  +     K+   + +   +++++   + I    V+  
Sbjct: 21  KSHKHLAQAGYIYQV---GSGIYNFLPLAKKVLDKIENATHKRMQEHGAQNILMSFVVLA 77

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SG  D Y   +   K   D       F L P        +  + +KSY++LPV L
Sbjct: 78  SLWEKSGRLDKYGKELLVFKDRKDN-----DFVLSPTLEENITEIAANFIKSYKQLPVHL 132

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT-KEQMFNECLKIHNLIISIYKDFGFE 421
            +  + +R+E      GL+R R F   D + F    E +  E L + +    I  D G +
Sbjct: 133 YQIHTKFRDEIRPRF-GLVRAREFIMKDGYSFHEDAESLDKEFLNMQSTYKEILSDLGLD 191


>gi|116512562|ref|YP_811469.1| seryl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11]
 gi|123025253|sp|Q02XG6|SYS_LACLS RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|116108216|gb|ABJ73356.1| seryl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11]
          Length = 423

 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 39/172 (22%), Positives = 75/172 (43%), Gaps = 11/172 (6%)

Query: 262 GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           GS  +F+   G ++ + L ++M     K+ Y E+ TP +++Q     +G +  ++ + F 
Sbjct: 160 GSRFLFYKGAGARLERALYNFMLDEHGKEGYTEMITPYMVNQESMFGTGQYPKFKEDTF- 218

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---L 377
                  +KD R F L P         +   +    ELP++       +R+E   +    
Sbjct: 219 ------ELKDDRGFVLIPTAEVPLTNYYRGEILDGSELPIKFTAMSPSFRSEAGSAGRDT 272

Query: 378 HGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
            GL+R+  F + +   F   +Q ++E  K+     +I +  G    +V LST
Sbjct: 273 RGLIRLHQFHKVEMVKFAKPDQSYDELEKMTANAENILQKLGLAYRVVALST 324


>gi|237796784|ref|YP_002864336.1| prolyl-tRNA synthetase [Clostridium botulinum Ba4 str. 657]
 gi|259511585|sp|C3KUV8|SYP_CLOB6 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|229260679|gb|ACQ51712.1| proline--tRNA ligase [Clostridium botulinum Ba4 str. 657]
          Length = 478

 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 79/396 (19%), Positives = 164/396 (41%), Gaps = 61/396 (15%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANM-FA 320
           G +     G+ I++ +  Y+  K+K+  +E ++ P  + ++L Q +  H + +   + + 
Sbjct: 39  GCMIIRPNGYAIWENIQKYVDTKLKEYGHENVSMPIFIPENLLQKEKDHVEGFAPEVAWV 98

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
               DD + +     ++P +       +   ++SY++LP    ++ SV R E +      
Sbjct: 99  THGGDDELAE--RLCVRPTSETLFCEHYAKIVQSYKDLPKLYNQWCSVVRWEKT--TRPF 154

Query: 381 MRVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDA 439
           +R   F   + H +  TKE+  +  LKI N+   + +D     +++   T  EK  G+D 
Sbjct: 155 LRTTEFLWQEGHTIHETKEEAESHSLKILNMYSRLCEDMLAMPVVMGKKTEKEKFAGADD 214

Query: 440 LWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-V 498
            +            TI++   D                          G+  Q GT   +
Sbjct: 215 TY------------TIESLMHD--------------------------GKALQAGTSHYL 236

Query: 499 DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQ 554
             N    F   + + + +  +P   H   +    R IG +I    ++    LP  ++P Q
Sbjct: 237 GQNFSKAFAIQFSDRNGKLEYP---HYTTWAVTTRLIGAIIMVHGDDSGLKLPPRIAPTQ 293

Query: 555 AIVTTITS---SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
           A++  +       +E A+E+   L +  + ++ D  ++   +K  E+ +K IP+ I  G 
Sbjct: 294 AVIIPVAQHKEGVLEKAKELKERL-AKVVRVKLDDSDKMPGWKYSEYEMKGIPLRIEIGP 352

Query: 612 KEASE-RSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           K+  + +++ +RR     T  +  LD I +  +E L
Sbjct: 353 KDIEKNQAVLVRRDNREKT--IVSLDEIEVKVQEML 386


>gi|170727590|ref|YP_001761616.1| prolyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
 gi|226701338|sp|B1KNR3|SYP_SHEWM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|169812937|gb|ACA87521.1| prolyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
          Length = 569

 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 38/177 (21%), Positives = 80/177 (45%), Gaps = 9/177 (5%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI- 287
           +++YL   ++    D   ++ ++ L    I  + SG+  W   G ++ + + + +R ++ 
Sbjct: 3   VSKYLLSTQKETPADAEVISHQLMLRAGMIRRNASGLYSWLPTGLRVLRKIEAIVREEMN 62

Query: 288 KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
           K    EI  P V    LW ++G ++ +   +   +   +     R F L P +      +
Sbjct: 63  KAGSVEILMPMVQPADLWVETGRFEKFGPELLRFQDRHN-----RDFVLGPTHEEVITDI 117

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
               + SY++LP+ L +  + +R+E      G+MR R F   DA+ F   ++  +E 
Sbjct: 118 VRKEVNSYKQLPLNLFQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHLDQETMDET 173


>gi|122879049|ref|YP_199448.6| prolyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|162319805|ref|YP_449766.2| prolyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|188578630|ref|YP_001915559.1| prolyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|114152279|sp|Q2P7I5|SYP_XANOM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|114152280|sp|Q5H4Q7|SYP_XANOR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226701357|sp|B2SPG9|SYP_XANOP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|188523082|gb|ACD61027.1| prolyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 564

 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 42/202 (20%), Positives = 83/202 (41%), Gaps = 14/202 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E   HR + R   +  +A   SG+  W   G ++ + + + +R ++ +    E+  P 
Sbjct: 17  DAELVSHRLMLRAGMIRKLA---SGLYTWSPLGLRVLRKVEAIVREEMDRAGAVEVLFPT 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +  + LW  +G W+ +   +  +K      +  + F   P             + SY++L
Sbjct: 74  IQPRELWDATGRWEKFGGQLLKIKD-----RKEQEFCYSPTAEEAAAEFARQEINSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKD 417
           P+   +  + +R+E      G+MR R F   DA+ F  T   M  E   +      I+  
Sbjct: 129 PLNFYQIQTKFRDEIRPRF-GVMRAREFLMKDAYSFHLTDADMAREYDNMRAAYTRIFTR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDA 439
            G +   V+  +     +G DA
Sbjct: 188 LGLDFRAVQADS---GAIGGDA 206


>gi|296272187|ref|YP_003654818.1| prolyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299]
 gi|296096362|gb|ADG92312.1| prolyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299]
          Length = 572

 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 75/170 (44%), Gaps = 16/170 (9%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQ-----HLWQQSGHWD 312
           I + GSG+  +   G    + ++  +R  +K++ +     ++L        LW+QSG   
Sbjct: 32  ITQTGSGLYNFLPLG----KIVLDKIRAVVKEEMDNTGANELLMSFVTPLELWEQSG--- 84

Query: 313 SYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE 372
             RA++   +      +    F L P N    V +  + + SY++LP+ L    + +R+E
Sbjct: 85  --RASVMGPELLKFKDRKGAGFVLSPTNEETVVDIVKNRITSYKDLPINLYHINTKFRDE 142

Query: 373 PSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFE 421
                 GLMR R F   DA+ F  T E +  E   + +    IY+  G E
Sbjct: 143 ARPRF-GLMRGREFLMKDAYSFHATHEDLVREFHVMEDAYKKIYERLGLE 191


>gi|302558076|ref|ZP_07310418.1| prolyl-tRNA synthetase [Streptomyces griseoflavus Tu4000]
 gi|302475694|gb|EFL38787.1| prolyl-tRNA synthetase [Streptomyces griseoflavus Tu4000]
          Length = 566

 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 40/174 (22%), Positives = 78/174 (44%), Gaps = 18/174 (10%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R     ++    +G+  W   G K+   +   +R ++     +E+  P 
Sbjct: 23  DAEVLSHKLLVRA---GYVRRTAAGIWTWLPLGKKVLANVERIVREEMDAIGAQEVLLPA 79

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L +  ++ +G WD Y   +F  +  D    D        +  P H  +F   +K    S
Sbjct: 80  LLPREPYEATGRWDEYGPELF--RLQDRKGGDY-------LLGPTHEEIFTLMVKDQASS 130

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
           Y++LPV L +  S YR+E +    G++R R F   D++ F  +++   +   +H
Sbjct: 131 YKDLPVILYQIQSKYRDE-ARPRAGILRGREFLMKDSYSFDLEDEGLAKSYALH 183


>gi|83746821|ref|ZP_00943869.1| Prolyl-tRNA synthetase [Ralstonia solanacearum UW551]
 gi|83726590|gb|EAP73720.1| Prolyl-tRNA synthetase [Ralstonia solanacearum UW551]
          Length = 626

 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 40/161 (24%), Positives = 73/161 (45%), Gaps = 8/161 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           G+G+  +   G +  + +   +R ++      E+  P V    LWQ++G WD     +  
Sbjct: 88  GAGIYTYMPVGLRAIRKVEQIVREEMNAAGAVEMLMPVVQPGELWQETGRWDKMGEELMR 147

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           VK  D   +DL    ++P +      +    ++SY+++PV   +  + +R+E      G+
Sbjct: 148 VK--DRHERDL---VIQPTSEEVVTDIARTEIRSYKQMPVNFYQIQTKFRDERRPRF-GI 201

Query: 381 MRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGF 420
           MR R FT  DA+ F    E M     K+ +    I++ FG 
Sbjct: 202 MRGREFTMKDAYSFDRDVEGMKVSYQKMFDAYTRIFQRFGL 242


>gi|328780811|ref|XP_003249866.1| PREDICTED: bifunctional aminoacyl-tRNA synthetase [Apis mellifera]
          Length = 1501

 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 73/323 (22%), Positives = 117/323 (36%), Gaps = 59/323 (18%)

Query: 319  FAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLH 378
            +  KC +  + +    A++P +       +   LKS  ELP++L ++ +V R E      
Sbjct: 1089 WVTKCGESNLSE--PIAIRPTSETVMYPAYAKWLKSDTELPLKLNQWNNVVRWEFKDP-K 1145

Query: 379  GLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGS 437
              +R R F   + H  F TK +   E L I N+   +Y+D     ++    T  EK  G 
Sbjct: 1146 PFLRTREFLWQEGHTAFATKAEADEEVLMILNMYARVYEDLLAVPVIKGRKTEKEKFAGG 1205

Query: 438  DALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI- 496
            D                                    Y    E  +  + GR  Q  T  
Sbjct: 1206 D------------------------------------YTTTVEAFISTS-GRAIQGATSH 1228

Query: 497  QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP---- 552
             +  N    FN   V    E      +++  +G   R IG+MI     +  L L P    
Sbjct: 1229 HLGQNFSKMFN-IQVEGAVESDEKTFVYQNSWGLTTRTIGVMIMIHGDDKGLVLPPNVAC 1287

Query: 553  IQAIVTT--ITSSAVEYAQEIA---------NLLKSHHLSIETDFRNE-TINYKIREHSI 600
            IQAI+    IT +     +E+           L K   L ++ D+RN  T  +K     +
Sbjct: 1288 IQAIIVPCGITVNTTPQQRELLFSECNKLLDELSKDKSLRVKADYRNNRTPGWKFNHWEL 1347

Query: 601  KKIPIIIICGDKEASERSIGIRR 623
            K +P+ I  G K+  +  +   R
Sbjct: 1348 KGVPVRIELGPKDLEKNQVTFVR 1370


>gi|238021436|ref|ZP_04601862.1| hypothetical protein GCWU000324_01336 [Kingella oralis ATCC 51147]
 gi|237868416|gb|EEP69422.1| hypothetical protein GCWU000324_01336 [Kingella oralis ATCC 51147]
          Length = 611

 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 37/161 (22%), Positives = 66/161 (40%), Gaps = 15/161 (9%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I  + SG+  W   G ++ + + + +R ++ +    E+  P V    LW++SG WD Y  
Sbjct: 76  IKANASGLYTWMPMGLRVLRKVEAIVREEMNRAGAIELLMPVVQPADLWKESGRWDFYGD 135

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            +  +    D       F   P        +    + SY++LP       + +R+E    
Sbjct: 136 ELLRITDRHDN-----AFCFSPTCEELITDIVRKEINSYKQLPKNFYHIQTKFRDERRPR 190

Query: 377 LHGLMRVRGFTQDDAHVF--------CTKEQMFNECLKIHN 409
             G+MR R F   DA+ F         T + M++   +I N
Sbjct: 191 F-GVMRAREFVMKDAYSFHADFESLKATYQTMYDAYCRIFN 230


>gi|90423927|ref|YP_532297.1| prolyl-tRNA synthetase [Rhodopseudomonas palustris BisB18]
 gi|114152242|sp|Q215F8|SYP_RHOPB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|90105941|gb|ABD87978.1| prolyl-tRNA synthetase [Rhodopseudomonas palustris BisB18]
          Length = 439

 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 45/202 (22%), Positives = 85/202 (42%), Gaps = 14/202 (6%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTP 297
           +E+E   HR + R      + ++ +G+  W   G ++ + +   +R  + +    E   P
Sbjct: 16  KEAEIVSHRLMLRAG---MMRQEAAGIYAWLPLGLRVLKKIEQIVREEQNRAGAIECLMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW++SG +D+Y   M  +     T +  R     P N      +F   ++SY+ 
Sbjct: 73  TLQLADLWRESGRYDAYGPEMLRI-----TDRHKRELLYGPTNEEMITEIFRAYVRSYKN 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYK 416
           LP+ L      +R+E      G+MR R F   DA+ F   E    +   ++    +  + 
Sbjct: 128 LPLNLYHIQWKFRDEQRPRF-GVMRGREFLMKDAYSFDIDEAAARKSYNRMFVAYLRTFA 186

Query: 417 DFGFEKIMVKLSTRPEKRVGSD 438
             G + I ++  T P   +G D
Sbjct: 187 RMGLKAIPMRAETGP---IGGD 205


>gi|254469374|ref|ZP_05082779.1| prolyl-tRNA synthetase [Pseudovibrio sp. JE062]
 gi|211961209|gb|EEA96404.1| prolyl-tRNA synthetase [Pseudovibrio sp. JE062]
          Length = 441

 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 45/202 (22%), Positives = 84/202 (41%), Gaps = 14/202 (6%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTP 297
           +E+E   HR + R      I +  +G+  W   G ++   +   +   + +    ++  P
Sbjct: 16  KEAEIVSHRLMLRA---GMIRQQSAGIYAWLPLGHRVLNKIQRIVEEEQNRSGAVQLLMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW++SG +D+Y   M  ++   +     R     P N      +F   ++SY++
Sbjct: 73  TIQPADLWRESGRYDAYGKEMLRIEDRHE-----REMLFGPTNEEMITDIFRSYVRSYKD 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYK 416
           LP+ L      +R+E      G+MR R F   DA+ F   KE+      ++    +  + 
Sbjct: 128 LPLNLYHIQWKFRDEVRPRF-GVMRGREFLMKDAYSFDLDKERSTEAYRRMFVAYLRTFA 186

Query: 417 DFGFEKIMVKLSTRPEKRVGSD 438
             G   I +K  T P   +G D
Sbjct: 187 RMGLTAIPMKADTGP---IGGD 205


>gi|207108695|ref|ZP_03242857.1| prolyl-tRNA synthetase [Helicobacter pylori HPKX_438_CA4C1]
          Length = 254

 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 42/180 (23%), Positives = 77/180 (42%), Gaps = 11/180 (6%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           + H+ LA+   ++ +   GSG+  +     K+   + +   +++++   + I    V+  
Sbjct: 21  KSHKHLAQAGYIYQV---GSGIYNFLPLAKKVLDKIENITHKRMQEHGAQNILMSFVVLA 77

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SG  D Y   +   K   D       F L P        +  + +KSY++LPV L
Sbjct: 78  SLWEKSGRLDKYGKELLVFKDRKDN-----DFVLSPTLEENITEIAANFIKSYKQLPVHL 132

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT-KEQMFNECLKIHNLIISIYKDFGFE 421
            +  + +R+E      GL+R R F   D + F    E +  E L   +    I  D G +
Sbjct: 133 YQIHTKFRDEIRPRF-GLVRAREFIMKDGYSFHEDAESLDKEFLNTQSAYKEILSDLGLD 191


>gi|85858185|ref|YP_460387.1| alanyl-tRNA synthetase [Syntrophus aciditrophicus SB]
 gi|123515492|sp|Q2LPL7|SYA_SYNAS RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|85721276|gb|ABC76219.1| alanyl-tRNA synthetase [Syntrophus aciditrophicus SB]
          Length = 878

 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 36/148 (24%), Positives = 67/148 (45%), Gaps = 15/148 (10%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSS 116
           S+ +I  ED R      HS  H++  A++++    ++ +   +  +   +DF        
Sbjct: 554 SVNLIVAEDKRRATEANHSATHLLQAAMKTVMGNHIKQSGSLVTAERLRFDFTHFSKIEE 613

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESK--KEAYKVEILESIPAKENVTLY 174
           +EL QIE     +I R+ P + + L  E+A +   +    E Y           E V + 
Sbjct: 614 NELEQIENLANAVIRRNLPVVTRVLPLEEAMKTGATAVFDEKY----------GEKVRVV 663

Query: 175 RQGEW-FDLCRGPHVRSTGQVKKFFKLM 201
           R G++  +LC G H++ TG +  F K++
Sbjct: 664 RMGDFSMELCGGTHIQRTGDI-GFIKII 690


>gi|88798124|ref|ZP_01113711.1| prolyl-tRNA synthetase [Reinekea sp. MED297]
 gi|88779321|gb|EAR10509.1| prolyl-tRNA synthetase [Reinekea sp. MED297]
          Length = 573

 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 34/162 (20%), Positives = 69/162 (42%), Gaps = 8/162 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++   + + +R ++ +   +E+  P +    LW++SG  D     M  
Sbjct: 36  ASGLYNWLPTGRRVLNKIETIIREELDRSGAQEVLMPTIQPAELWEESGRIDKMEGQMLK 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           ++      +  R F   P +      +  + L SY++LP+   +  + +R+E      G+
Sbjct: 96  MQD-----RHQRDFVYGPTHEEVITDIARNELTSYKQLPMNFYQIQNKFRDEFRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFN-ECLKIHNLIISIYKDFGFE 421
           MR R F   D + F   ++  N E   ++     I+   G +
Sbjct: 150 MRSREFVMKDGYSFHVDQECLNKEYDNMYQAYCRIFDRLGLD 191


>gi|207721477|ref|YP_002251917.1| prolyl-trna synthetase protein [Ralstonia solanacearum MolK2]
 gi|206586637|emb|CAQ17223.1| prolyl-trna synthetase protein [Ralstonia solanacearum MolK2]
          Length = 574

 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 38/161 (23%), Positives = 71/161 (44%), Gaps = 8/161 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           G+G+  +   G +  + +   +R ++      E+  P V    LWQ++G WD     +  
Sbjct: 36  GAGIYTYMPVGLRAIRKVEQIVREEMNAAGAVEMLMPVVQPGELWQETGRWDKMGEELMR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           VK   +     R   ++P +      +    ++SY+++PV   +  + +R+E      G+
Sbjct: 96  VKDRHE-----RDLVIQPTSEEVVTDIARTEIRSYKQMPVNFYQIQNKFRDERRPRF-GI 149

Query: 381 MRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGF 420
           MR R FT  DA+ F    E M     K+ +    I++ FG 
Sbjct: 150 MRGREFTMKDAYSFDRDVEGMKVSYQKMFDAYTRIFQRFGL 190


>gi|125623578|ref|YP_001032061.1| seryl-tRNA synthetase [Lactococcus lactis subsp. cremoris MG1363]
 gi|166222737|sp|A2RJ76|SYS_LACLM RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|124492386|emb|CAL97327.1| SerS protein [Lactococcus lactis subsp. cremoris MG1363]
 gi|300070342|gb|ADJ59742.1| seryl-tRNA synthetase [Lactococcus lactis subsp. cremoris NZ9000]
          Length = 423

 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 39/172 (22%), Positives = 75/172 (43%), Gaps = 11/172 (6%)

Query: 262 GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           GS  +F+   G ++ + L ++M     K+ Y E+ TP +++Q     +G +  ++ + F 
Sbjct: 160 GSRFLFYKGAGARLERALYNFMLDEHGKEGYTEMITPYMVNQESMFGTGQYPKFKEDTF- 218

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---L 377
                  +KD R F L P         +   +    ELP++       +R+E   +    
Sbjct: 219 ------ELKDDRGFVLIPTAEVPLTNYYRGEILDGSELPIKFTAMSPSFRSEAGSAGRDT 272

Query: 378 HGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
            GL+R+  F + +   F   +Q ++E  K+     +I +  G    +V LST
Sbjct: 273 RGLIRLHQFHKVEMVKFAKPDQSYDELEKMTANAENILQKLGLAYRVVALST 324


>gi|325958767|ref|YP_004290233.1| prolyl-tRNA synthetase [Methanobacterium sp. AL-21]
 gi|325330199|gb|ADZ09261.1| Prolyl-tRNA synthetase [Methanobacterium sp. AL-21]
          Length = 469

 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 84/408 (20%), Positives = 168/408 (41%), Gaps = 72/408 (17%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVL-DQHLWQQSGHWDSYRANMFAVK 322
           G+  W  +G+KI +  +  ++  +  D+EE+  P ++ +  L +++ H   +   ++ V 
Sbjct: 26  GMHVWLPQGFKIRKHTLEILKTILDKDHEEVMFPLLIPEDELAKEAIHVKGFEEEVYWVT 85

Query: 323 CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMR 382
               T  + +  AL+P +      +F+  ++++ +LP+R  +  + +R E   +   L+R
Sbjct: 86  HGGLTELN-KKLALRPTSETAMYPMFSLWVRNHSDLPMRYYQVVNTFRYETKHT-RPLIR 143

Query: 383 VRGFTQ-DDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV--KLSTRPEKRVGSDA 439
           VR  T   +AH   +  +   E +K     + IY+ F F+ + +   +S RPE       
Sbjct: 144 VREITTFKEAHTVHSSAEETEEQVK---EALRIYRQF-FDSLGIPYTVSKRPE------- 192

Query: 440 LWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVD 499
            WD                             GA Y   F+ +L D  G+  Q GT+   
Sbjct: 193 -WDKF--------------------------PGALYTMAFDTLLPD--GKTLQIGTVH-- 221

Query: 500 FNLPSRF-NAFYVNSHSEKCHPVMIHRAVFGSIER----FIGIMIENFKGNLPLWLSPIQ 554
            NL   F   F +   + + +   +++  +G  +R     IGI  ++    LP  ++P  
Sbjct: 222 -NLGQTFAKTFDITYETAEGNHEYVYQTCYGLSDRVIASLIGIHGDDSGLCLPPDVAPYH 280

Query: 555 AIVTTIT-----SSAVEYAQEIANLLKSH-HLSIETDFRNETINYKIREHSIKKIPIIII 608
            ++  I         +++ +++   L+S  +L +  D R+     K  E  ++ IP+ + 
Sbjct: 281 VVIVPIIFKKGGEVVIDFCKKLQEKLESELNLRVYFDDRDIRAGKKYYEWEMRGIPLRLE 340

Query: 609 CGDKEASERSIGIRR----------FGSTTTQKV--SLLDAIPILTKE 644
            G ++     I   R          +  TT  K   +LLD I    +E
Sbjct: 341 VGPRDIENHKIVTFRRESKEKEIIDYDDTTISKTVNNLLDNISTKMRE 388


>gi|307183202|gb|EFN70111.1| 39S ribosomal protein L39, mitochondrial [Camponotus floridanus]
          Length = 353

 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 54/241 (22%), Positives = 104/241 (43%), Gaps = 23/241 (9%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAV---IRHS 76
           +T  D A  IS ++AK A    ++G+V D+  P   +  +E++T + P++  V      +
Sbjct: 97  STPYDCARHISENVAKTAAIALVDGRVWDMHRPFTGKCELELVTMQSPKTGVVNYAFWRT 156

Query: 77  CAHIMAEAVQSIW-----------PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           C+ I+     S +           P  Q+  G  I D F  D    +P  S EL  +   
Sbjct: 157 CSMILGAVADSAFKDHVDVHLHSFPVPQIHSGSFIYDVFI-DLPNWRPTDS-ELRAMSAL 214

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKK-EAYKVEILESIPAKENVTLYRQGEWFDLCR 184
             ++  ++    +  +  + A  +F+    ++ ++  +      + VTLYR G++ D+ +
Sbjct: 215 FIKLTNQELLLERLEVPCDVALHMFQDNPFKSQQIPNIAKNSDNDRVTLYRLGDYVDISK 274

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY-FLEESEK 243
           GP V S+G + +    + V+  +   D     L R  G A      L  + +  LE+  K
Sbjct: 275 GPMVSSSGLMGR----VTVSAVHKLADGPVDGLYRFQGIALPKGILLNHFAFSILEKRAK 330

Query: 244 R 244
           +
Sbjct: 331 K 331


>gi|323343555|ref|ZP_08083782.1| phosphoribulokinase [Prevotella oralis ATCC 33269]
 gi|323095374|gb|EFZ37948.1| phosphoribulokinase [Prevotella oralis ATCC 33269]
          Length = 553

 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/118 (24%), Positives = 57/118 (48%), Gaps = 1/118 (0%)

Query: 80  IMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQ 139
           ++ +AV  ++P  +V I   + +G+Y +     P    ++  I  +MQ+II    P  + 
Sbjct: 82  VLCKAVHDLFPRSEVVIDIPVSNGYYCNLSLGHPVGLQDVDAIRGRMQQIIDEKIPIRRF 141

Query: 140 YLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
            +  E+A ++FE K +  K ++L SI      T Y+  ++ D   G  + +T  +  F
Sbjct: 142 EVRTEEAVKMFEEKGDEAKAKLLRSI-GSLYTTYYQMDDYVDYYYGSLLTNTKDLYLF 198


>gi|166713436|ref|ZP_02244643.1| prolyl-tRNA synthetase [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 564

 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 42/202 (20%), Positives = 83/202 (41%), Gaps = 14/202 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E   HR + R   +  +A   SG+  W   G ++ + + + +R ++ +    E+  P 
Sbjct: 17  DAELVSHRLMLRAGMIRKLA---SGLYTWSPLGLRVLRKVEAIVREEMNRAGAVEVLFPT 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +  + LW  +G W+ +   +  +K   +     + F   P             + SY++L
Sbjct: 74  IQPRELWDATGRWEKFGGQLLKIKDRKE-----QEFCYSPTAEEAAAEFARQEINSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKD 417
           P+   +  + +R+E      G+MR R F   DA+ F  T   M  E   +      I+  
Sbjct: 129 PLNFYQIQTKFRDEIRPRF-GVMRAREFLMKDAYSFHLTDADMAREYDNMRAAYTRIFTR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDA 439
            G +   V+  +     +G DA
Sbjct: 188 LGLDFRAVQADS---GAIGGDA 206


>gi|218294683|ref|ZP_03495537.1| alanyl-tRNA synthetase [Thermus aquaticus Y51MC23]
 gi|218244591|gb|EED11115.1| alanyl-tRNA synthetase [Thermus aquaticus Y51MC23]
          Length = 881

 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 62/143 (43%), Gaps = 19/143 (13%)

Query: 66  DPRSLAVIR-HSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           DPR     R H+  H++  A++++  P V+ A   +  D   +DF   +P   +EL +IE
Sbjct: 564 DPRRRDTERNHTATHLLHAALRAVLGPHVRQAGSLVAPDRLRFDFTHPEPLKGEELERIE 623

Query: 124 KKMQEIIARDSPFLKQYLSHEKARE-----LFESK---KEAYKVEILESIPAKENVTLYR 175
             +   I  D P   +YL  E+A++     LF  K              +P  E+     
Sbjct: 624 LLVNRWIMADFPVTWRYLPLEEAKKEGAMALFGEKYGEVVRVVRVEGSPVPGLESK---- 679

Query: 176 QGEWFDLCRGPHVRSTGQVKKFF 198
                +LC G HVR TG++  F 
Sbjct: 680 -----ELCGGTHVRRTGEIGAFL 697


>gi|28199512|ref|NP_779826.1| prolyl-tRNA synthetase [Xylella fastidiosa Temecula1]
 gi|182682245|ref|YP_001830405.1| prolyl-tRNA synthetase [Xylella fastidiosa M23]
 gi|81839496|sp|Q87B25|SYP_XYLFT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226701358|sp|B2I7W6|SYP_XYLF2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|28057627|gb|AAO29475.1| prolyl-tRNA synthetase [Xylella fastidiosa Temecula1]
 gi|182632355|gb|ACB93131.1| prolyl-tRNA synthetase [Xylella fastidiosa M23]
 gi|307578519|gb|ADN62488.1| prolyl-tRNA synthetase [Xylella fastidiosa subsp. fastidiosa GB514]
          Length = 564

 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 39/184 (21%), Positives = 77/184 (41%), Gaps = 11/184 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E   HR + R   +  +A   SG+  W   G ++ + + + +R ++ +    E+  P 
Sbjct: 17  DAELVSHRLMLRAGMIRKLA---SGLYTWSPLGLRVLRKVEAIVRDEMNRAGAVEMLLPT 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +  + LW++S  W+ + + +  +K      +    +   P             L SY++L
Sbjct: 74  IQPRELWEESERWEKFGSQLLKIKD-----RKQAEYCYSPTAEEAVTDYVRQELTSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKD 417
           PV L +  + +R+E      G+MR R F   DA+ F      +  E   +      I+  
Sbjct: 129 PVNLYQIQTKFRDEIRPRF-GVMRAREFVMKDAYSFHLNDADLVREYENMRATYTRIFTR 187

Query: 418 FGFE 421
            G E
Sbjct: 188 LGLE 191


>gi|306844100|ref|ZP_07476694.1| alanyl-tRNA synthetase [Brucella sp. BO1]
 gi|306275543|gb|EFM57275.1| alanyl-tRNA synthetase [Brucella sp. BO1]
          Length = 885

 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 12/128 (9%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++ EA++          G ++  D   +DF   +P S++EL  +E    EII ++
Sbjct: 564 HSATHLLHEALRETLGTHVAQKGSLVAPDRLRFDFSHPKPISAEELEAVENLANEIILQN 623

Query: 134 SPFLKQYLS-----HEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF--DLCRGP 186
           +P   + ++      E A  LF  +K   +V ++    AK      + G+ +  +LC G 
Sbjct: 624 APVTTRLMAVDDAIAEGAMALF-GEKYGDEVRVVSMGTAKHG---SKAGKAYSVELCGGT 679

Query: 187 HVRSTGQV 194
           HVR TG +
Sbjct: 680 HVRQTGDI 687


>gi|121603656|ref|YP_980985.1| prolyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2]
 gi|152112939|sp|A1VK86|SYP_POLNA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|120592625|gb|ABM36064.1| prolyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2]
          Length = 581

 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 31/134 (23%), Positives = 66/134 (49%), Gaps = 7/134 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           G+G+  +   G ++ + + + +R ++ +    E++ P +    LWQ++G +++    +  
Sbjct: 36  GAGIYNYMPMGLRVIRKVEAIVREEMNRAGAIEMSMPVIQPAELWQETGRFEAMGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +K      +  R F ++P +      V    ++SY++LP  L +  + +R+E      GL
Sbjct: 96  IKD-----RHGRDFVVQPTSEEVVTDVMRQDIRSYKQLPKNLYQIQTKFRDERRPRF-GL 149

Query: 381 MRVRGFTQDDAHVF 394
           MR R F   DA+ F
Sbjct: 150 MRGREFIMKDAYSF 163


>gi|262371768|ref|ZP_06065047.1| prolyl-tRNA synthetase [Acinetobacter junii SH205]
 gi|262311793|gb|EEY92878.1| prolyl-tRNA synthetase [Acinetobacter junii SH205]
          Length = 571

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 66/146 (45%), Gaps = 7/146 (4%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG+  W   G ++ + + + +R ++ +    E+  P      LW++SG ++ Y   +   
Sbjct: 37  SGLYSWLPMGTRVLKKVDAIVREEMNRSGALEVFMPVTQPAALWEESGRFEQYGPELLRF 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           K  D    D   F L P +      +  + LKSY++LP+   +  + +R+E      G+M
Sbjct: 97  K--DRHTND---FVLGPTHEEVITDLARNELKSYKQLPLNFYQIQTKFRDEIRPRF-GVM 150

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLKI 407
           R R F   DA+ F   ++   E   +
Sbjct: 151 RSREFIMKDAYSFHANQESLQETYDV 176


>gi|148560301|ref|YP_001259121.1| alanyl-tRNA synthetase [Brucella ovis ATCC 25840]
 gi|205829997|sp|A5VQX4|SYA_BRUO2 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|148371558|gb|ABQ61537.1| alanyl-tRNA synthetase [Brucella ovis ATCC 25840]
          Length = 885

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 12/128 (9%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++ EA++          G ++  D   +DF   +P S++EL  +E    EII ++
Sbjct: 564 HSATHLLHEALRETLGTHVAQKGSLVAPDRLRFDFSHPKPISAEELEAVENLANEIILQN 623

Query: 134 SPFLKQYLS-----HEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF--DLCRGP 186
           +P   + ++      E A  LF  +K   +V ++    AK      + G+ +  +LC G 
Sbjct: 624 APVTTRLMAVDDAIAEGAMALF-GEKYGDEVRVVSMGTAKHG---SKAGKAYSVELCGGT 679

Query: 187 HVRSTGQV 194
           HVR TG +
Sbjct: 680 HVRQTGDI 687


>gi|313901629|ref|ZP_07835066.1| prolyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965]
 gi|313468110|gb|EFR63587.1| prolyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965]
          Length = 586

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 39/156 (25%), Positives = 70/156 (44%), Gaps = 10/156 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+E   HR + R   +  +    +G+  W   G +    + + +R ++ +    E+  P 
Sbjct: 17  EAEIASHRLMLRAGLIRRVT---AGIYEWLPLGRRAVVKVETIVREEMNRKGGLEVGLPI 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    LW+++G W  Y   M+ +K      +  R + L P +      +    + SYR+L
Sbjct: 74  VQPAELWRETGRWAQYGEEMWRLK-----DRHGREYCLGPTHEEIITDLVRATVSSYRQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           P+ L +  + YR+E      G+MR R F   DA+ F
Sbjct: 129 PLLLYQIQNKYRDEIRPRF-GVMRAREFIMKDAYSF 163


>gi|254525440|ref|ZP_05137492.1| prolyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
 gi|221536864|gb|EEE39317.1| prolyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
          Length = 598

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 62/134 (46%), Gaps = 10/134 (7%)

Query: 297 PQVLDQHLWQQSGHWDSYRAN---MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           PQ+    LW++S  W+ Y A    MF +K      +  + F L P +     ++ +  + 
Sbjct: 71  PQLHPADLWRKSERWEGYTAGEGIMFNLKD-----RQGKEFGLAPTHEEVITSIASETIN 125

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLII 412
           SY++LP    +  + +R+E      GLMR R F   D + F + E+       K+ N   
Sbjct: 126 SYKQLPQCFYQIQTKFRDEIRPRF-GLMRSREFIMKDGYSFHSSEKDLASFYEKVGNAYE 184

Query: 413 SIYKDFGFEKIMVK 426
           +I+K  G E + V+
Sbjct: 185 NIFKSCGLETVGVE 198


>gi|254719259|ref|ZP_05181070.1| alanyl-tRNA synthetase [Brucella sp. 83/13]
 gi|265984258|ref|ZP_06096993.1| alanyl-tRNA synthetase [Brucella sp. 83/13]
 gi|306838009|ref|ZP_07470867.1| alanyl-tRNA synthetase [Brucella sp. NF 2653]
 gi|264662850|gb|EEZ33111.1| alanyl-tRNA synthetase [Brucella sp. 83/13]
 gi|306406933|gb|EFM63154.1| alanyl-tRNA synthetase [Brucella sp. NF 2653]
          Length = 885

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 12/128 (9%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++ EA++          G ++  D   +DF   +P S++EL  +E    EII ++
Sbjct: 564 HSATHLLHEALRETLGTHVAQKGSLVAPDRLRFDFSHPKPISAEELEAVENLANEIILQN 623

Query: 134 SPFLKQYLS-----HEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF--DLCRGP 186
           +P   + ++      E A  LF  +K   +V ++    AK      + G+ +  +LC G 
Sbjct: 624 APVTTRLMAVDDAIAEGAMALF-GEKYGDEVRVVSMGTAKHG---SKAGKAYSVELCGGT 679

Query: 187 HVRSTGQV 194
           HVR TG +
Sbjct: 680 HVRQTGDI 687


>gi|260587370|ref|ZP_05853283.1| proline--tRNA ligase [Blautia hansenii DSM 20583]
 gi|331083671|ref|ZP_08332782.1| prolyl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA]
 gi|260542237|gb|EEX22806.1| proline--tRNA ligase [Blautia hansenii DSM 20583]
 gi|330403882|gb|EGG83434.1| prolyl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA]
          Length = 479

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 40/161 (24%), Positives = 78/161 (48%), Gaps = 14/161 (8%)

Query: 474 FYGPKFEYILKDAI--GRDWQCGTIQVDFNLPSRF-NAFYVNSHSEKCHPVMIHRAVFGS 530
           F G +  Y ++  +  G+  Q GT     N    F  AF +    ++     +H+  +G 
Sbjct: 209 FAGAESTYTIEALMHDGKALQSGT---SHNFGDGFAKAFGIQYTDKENKLQYVHQTSWGM 265

Query: 531 IERFIGIMI----ENFKGNLPLWLSPIQAIVTTITS---SAVEYAQEIANLLKSHHLSIE 583
             R IG +I    +N    LP  ++P+QA+V  I       ++ A ++   LK+  + ++
Sbjct: 266 TTRLIGAIIMVHGDNSGLVLPPRIAPVQAVVIPIQQKKEGVLDNAYKLQAQLKAAGIRVK 325

Query: 584 TDFRNETINYKIREHSIKKIPIIIICGDKEA-SERSIGIRR 623
           TD  +++  +K  E  ++ IP+ I CG K+  + +++ +RR
Sbjct: 326 TDDTDKSPGFKFAEQEMRGIPVRIECGPKDMEANQAVVVRR 366


>gi|239817181|ref|YP_002946091.1| prolyl-tRNA synthetase [Variovorax paradoxus S110]
 gi|259511631|sp|C5CXW9|SYP_VARPS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|239803758|gb|ACS20825.1| prolyl-tRNA synthetase [Variovorax paradoxus S110]
          Length = 581

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 36/156 (23%), Positives = 71/156 (45%), Gaps = 10/156 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E   HR + R      I + G+G+  +   G ++ + + + +R ++ +    E+  P 
Sbjct: 17  DAEVASHRLMMRAG---MIKKLGTGIYTYMPMGLRVIRKVEAIVREEMNRAGAVELTMPV 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V     WQ++G +D     +  +K   D     R F ++P +      +    ++SY++L
Sbjct: 74  VQPAEFWQETGRFDKMGPELLRIKDRHD-----RDFVVQPTSEEVVTDIARQEIRSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           P    +  + +R+E      GLMR R F   DA+ F
Sbjct: 129 PKNFYQIQTKFRDERRPRF-GLMRGREFIMKDAYSF 163


>gi|227488647|ref|ZP_03918963.1| prolyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51867]
 gi|227543250|ref|ZP_03973299.1| prolyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51866]
 gi|227091541|gb|EEI26853.1| prolyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51867]
 gi|227181059|gb|EEI62031.1| prolyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51866]
          Length = 588

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 42/196 (21%), Positives = 89/196 (45%), Gaps = 19/196 (9%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +  +A    GV  W   G ++ + + + +R ++     +E+  P 
Sbjct: 19  DAEVPSHKLLVRAGYIRRVA---PGVYTWLPLGLRVLRKIENIVREEMNAIGGQELRFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L +  ++ +  W  Y  ++F +K  D    D+       +  P H  +F   +K    S
Sbjct: 76  LLPREPYELTQRWTEYGNSLFRLK--DRKGNDM-------LLGPTHEEMFTQVVKDMYSS 126

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII-S 413
           Y++ PV L +  + YR+E      G++R R F   D++ F   ++  +E  + H     +
Sbjct: 127 YKDFPVLLYQIQTKYRDEER-PRAGILRGREFVMKDSYSFNMDDEGLDESYQNHRQAYQN 185

Query: 414 IYKDFGFEKIMVKLST 429
           I+   G + ++ K ++
Sbjct: 186 IFNRLGLDYVICKATS 201


>gi|225852697|ref|YP_002732930.1| alanyl-tRNA synthetase [Brucella melitensis ATCC 23457]
 gi|256263812|ref|ZP_05466344.1| alanyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9]
 gi|225641062|gb|ACO00976.1| alanyl-tRNA synthetase [Brucella melitensis ATCC 23457]
 gi|263093940|gb|EEZ17874.1| alanyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9]
 gi|326409221|gb|ADZ66286.1| alanyl-tRNA synthetase [Brucella melitensis M28]
 gi|326538929|gb|ADZ87144.1| alanyl-tRNA synthetase [Brucella melitensis M5-90]
          Length = 885

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 12/128 (9%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++ EA++          G ++  D   +DF   +P S++EL  +E    EII ++
Sbjct: 564 HSATHLLHEALRETLGTHVAQKGSLVAPDRLRFDFSHPKPISAEELEAVENLANEIILQN 623

Query: 134 SPFLKQYLS-----HEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF--DLCRGP 186
           +P   + ++      E A  LF  +K   +V ++    AK      + G+ +  +LC G 
Sbjct: 624 APVTTRLMAVDDAIAEGAMALF-GEKYGDEVRVVSMGTAKHG---SKAGKAYSVELCGGT 679

Query: 187 HVRSTGQV 194
           HVR TG +
Sbjct: 680 HVRQTGDI 687


>gi|317010519|gb|ADU84266.1| prolyl-tRNA synthetase [Helicobacter pylori SouthAfrica7]
          Length = 577

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 43/180 (23%), Positives = 77/180 (42%), Gaps = 11/180 (6%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           + H+ LA+   ++ I   GSG+  +     K+   + +   +++++   + I    V+  
Sbjct: 21  KSHKHLAQAGYIYQI---GSGIYNFLPLAKKVLDKIENITHKRMQEHGAQNILMSFVVLA 77

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SG  D Y   +   K   D       F L P        +  + +KSY++LPV L
Sbjct: 78  SLWEKSGRLDKYGKELLVFKDRKDN-----DFVLSPTLEENITEIAANFIKSYKQLPVHL 132

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT-KEQMFNECLKIHNLIISIYKDFGFE 421
            +  + +R+E      GL+R R F   D + F    E +  E L   +    I  D G +
Sbjct: 133 YQIHTKFRDEIRPRF-GLVRAREFIMKDGYSFHEDAESLDEEFLNTQSAYKEILNDLGLD 191


>gi|294677986|ref|YP_003578601.1| prolyl-tRNA synthetase [Rhodobacter capsulatus SB 1003]
 gi|294476806|gb|ADE86194.1| prolyl-tRNA synthetase [Rhodobacter capsulatus SB 1003]
          Length = 446

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 41/183 (22%), Positives = 78/183 (42%), Gaps = 11/183 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  +G+  W   G+K+ + +   +   +I+  +  +  P +    LW++SG +D Y  
Sbjct: 32  IKQQAAGIYSWLPLGFKVLKRIEQIVHEEQIRAGHIPLLMPTLQPADLWRESGRYDDYGQ 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  +K   +     R     P N      +F   + SY++LP+ L      +R+E    
Sbjct: 92  EMLRIKDRHE-----REMLYGPTNEEMITDIFRAHVSSYKDLPLTLYHIQWKFRDEVRPR 146

Query: 377 LHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
             G+MR R F   D + F  T+E   +   +     +  Y+  G   I ++ ++ P   +
Sbjct: 147 F-GVMRGREFYMKDGYNFDLTREDALHAYNRHMVSYLRTYERMGLTAIPMRAASGP---I 202

Query: 436 GSD 438
           G D
Sbjct: 203 GGD 205


>gi|37522094|ref|NP_925471.1| prolyl-tRNA synthetase [Gloeobacter violaceus PCC 7421]
 gi|81834313|sp|Q7NHL0|SYP_GLOVI RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|35213093|dbj|BAC90466.1| prolyl-tRNA synthetase [Gloeobacter violaceus PCC 7421]
          Length = 589

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 34/155 (21%), Positives = 67/155 (43%), Gaps = 11/155 (7%)

Query: 275 IFQTLISYMRRKIKDDYEEINTPQVL-----DQHLWQQSGHWDSYR--ANMFAVKCADDT 327
           + Q ++  + R ++++ +     + L        +W++SG W  Y     MF +K  D  
Sbjct: 48  LMQRVLQKVGRIVREEMDATGAQEALFCQLQPAEIWKESGRWTVYTQDGTMFTLK--DGQ 105

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
            +  R + L P +           L SY++LP  L +  + +RNE      GLMR R F 
Sbjct: 106 GEQAREYGLGPTHEEAVCDFVRASLNSYKQLPFHLYQVQTKFRNEKRPRF-GLMRGREFI 164

Query: 388 QDDAHVFCTKEQMFNECLK-IHNLIISIYKDFGFE 421
             D + F    +  +E  + ++    ++++  G +
Sbjct: 165 MKDGYSFHATPESLDETYRAMYRAYTNMFRRCGLD 199


>gi|15640001|ref|NP_219454.1| alanyl-tRNA synthetase [Treponema pallidum subsp. pallidum str.
           Nichols]
 gi|189026240|ref|YP_001934012.1| alanyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14]
 gi|6094390|sp|O83980|SYA_TREPA RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|3323345|gb|AAC65968.1| alanyl-tRNA synthetase (alaS) [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189018815|gb|ACD71433.1| alanyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14]
          Length = 605

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 59/125 (47%), Gaps = 10/125 (8%)

Query: 75  HSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           H+  H++ +A++ +    VQ     I  +   +DF   +P S+ E  Q+E+ + E I  D
Sbjct: 463 HTATHLLHQALRVVLGTHVQQKGSNITAERLRFDFSHPRPMSAQEKVQVEQLVNEQIRAD 522

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF-DLCRGPHVRSTG 192
            P   + +S E A     S   A   E  ES      V +Y  G +  ++C GPHV  TG
Sbjct: 523 LPVCCEVMSLEDA---MNSGAVALFGEKYES-----TVKVYSIGTFSREVCGGPHVARTG 574

Query: 193 QVKKF 197
           Q+ +F
Sbjct: 575 QLGRF 579


>gi|71899288|ref|ZP_00681449.1| Proline--tRNA ligase [Xylella fastidiosa Ann-1]
 gi|71730914|gb|EAO32984.1| Proline--tRNA ligase [Xylella fastidiosa Ann-1]
          Length = 303

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 39/184 (21%), Positives = 78/184 (42%), Gaps = 11/184 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E   HR + R   +  +A   SG+  W   G ++ + + + +R ++ +    E+  P 
Sbjct: 17  DAELVSHRLMLRAGMIRKLA---SGLYTWSPLGLRVLRKVEAIVRDEMNRAGAVEMLLPT 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +  + LW++S  W+ + + +  +K      +    +   P             L SY++L
Sbjct: 74  IQPRELWEESERWEKFGSQLLKIKD-----RKQAEYCYSPTAEEAVTDYVRQELTSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKD 417
           PV L +  + +R+E      G+MR R F   DA+ F  +   +  E   +      I+  
Sbjct: 129 PVNLYQIQTKFRDEIRPRF-GVMRAREFVMKDAYSFHLSDADLVREYENMRATYTRIFTR 187

Query: 418 FGFE 421
            G E
Sbjct: 188 LGLE 191


>gi|294852536|ref|ZP_06793209.1| alanyl-tRNA synthetase [Brucella sp. NVSL 07-0026]
 gi|294821125|gb|EFG38124.1| alanyl-tRNA synthetase [Brucella sp. NVSL 07-0026]
          Length = 885

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 12/128 (9%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++ EA++          G ++  D   +DF   +P S++EL  +E    EII ++
Sbjct: 564 HSATHLLHEALRETLGTHVAQKGSLVAPDRLRFDFSHPKPISAEELEAVENLANEIILQN 623

Query: 134 SPFLKQYLS-----HEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF--DLCRGP 186
           +P   + ++      E A  LF  +K   +V ++    AK      + G+ +  +LC G 
Sbjct: 624 APVTTRLMAVDDAIAEGAMALF-GEKYGDEVRVVSMGTAKHG---SKAGKAYSVELCGGT 679

Query: 187 HVRSTGQV 194
           HVR TG +
Sbjct: 680 HVRQTGDI 687


>gi|258543749|ref|ZP_05703983.1| proline--tRNA ligase [Cardiobacterium hominis ATCC 15826]
 gi|258520985|gb|EEV89844.1| proline--tRNA ligase [Cardiobacterium hominis ATCC 15826]
          Length = 567

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 38/166 (22%), Positives = 72/166 (43%), Gaps = 8/166 (4%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I ++  GV  W   G ++ + +   +R ++ +    E+  P V    LWQ+SG W  Y  
Sbjct: 32  IRQNALGVYSWLPLGLRVLRKVEQIIREEMNRAGSLELLMPGVQPGELWQESGRWQDYGP 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            +   +  D   +  R + L P +      +    L SY++LP+ + +  + +R+E    
Sbjct: 92  ELL--RFLD---RHEREYCLGPTHEEVITDLMRRDLSSYKQLPLNVYQIQTKFRDEIRPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDFGFE 421
             G+MR R F   DA+ F   E       + +++    I+   G +
Sbjct: 147 F-GVMRGREFLMKDAYSFHLDEASLQATYQDMYDAYCRIFDRLGLD 191


>gi|157412925|ref|YP_001483791.1| prolyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215]
 gi|166980140|sp|A8G3M4|SYP_PROM2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|157387500|gb|ABV50205.1| Prolyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215]
          Length = 600

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 62/134 (46%), Gaps = 10/134 (7%)

Query: 297 PQVLDQHLWQQSGHWDSYRAN---MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           PQ+    LW++S  W+ Y A    MF +K      +  + F L P +     ++ +  + 
Sbjct: 73  PQLHPADLWRKSERWEGYTAGEGIMFNLKD-----RQGKEFGLAPTHEEVITSIASETIN 127

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLII 412
           SY++LP    +  + +R+E      GLMR R F   D + F + E+       K+ N   
Sbjct: 128 SYKQLPQCFYQIQTKFRDEIRPRF-GLMRSREFIMKDGYSFHSSEKDLASFYEKVGNAYE 186

Query: 413 SIYKDFGFEKIMVK 426
           +I+K  G E + V+
Sbjct: 187 NIFKSCGLETVGVE 200


>gi|302383072|ref|YP_003818895.1| prolyl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264]
 gi|302193700|gb|ADL01272.1| prolyl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264]
          Length = 437

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 41/183 (22%), Positives = 77/183 (42%), Gaps = 11/183 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I ++ +G+  W   G ++   +   +R  + +    E+  P +    LW++SG +D+Y  
Sbjct: 32  IKQEAAGIYAWLPLGLRVLNRIEQIVREEQERAGAVELLMPTLQLADLWRESGRYDAYGP 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  +     T +  R     P N      +F   +KSY+ LP+ L      +R+E    
Sbjct: 92  EMLRI-----TDRHERELLYGPTNEEMITDIFRGFVKSYKALPLNLFHIQWKFRDERRPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
             G+MR R F   DA+ F   E        ++    ++ +   G + + ++  T P   +
Sbjct: 147 F-GVMRGREFLMKDAYSFDIDEASARRAYNRMFVAYLNTFARMGLKAVPMRADTGP---I 202

Query: 436 GSD 438
           G D
Sbjct: 203 GGD 205


>gi|256113755|ref|ZP_05454559.1| alanyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|265995116|ref|ZP_06107673.1| alanyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|262766229|gb|EEZ12018.1| alanyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
          Length = 885

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 12/128 (9%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++ EA++          G ++  D   +DF   +P S++EL  +E    EII ++
Sbjct: 564 HSATHLLHEALRETLGTHVAQKGSLVAPDRLRFDFSHPKPISAEELEAVENLANEIILQN 623

Query: 134 SPFLKQYLS-----HEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF--DLCRGP 186
           +P   + ++      E A  LF  +K   +V ++    AK      + G+ +  +LC G 
Sbjct: 624 APVTTRLMAVDDAIAEGAMALF-GEKYGDEVRVVSMGTAKHG---SKAGKAYSVELCGGT 679

Query: 187 HVRSTGQV 194
           HVR TG +
Sbjct: 680 HVRQTGDI 687


>gi|17987072|ref|NP_539706.1| alanyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|23502078|ref|NP_698205.1| alanyl-tRNA synthetase [Brucella suis 1330]
 gi|62290112|ref|YP_221905.1| alanyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941]
 gi|82700035|ref|YP_414609.1| alanyl-tRNA synthetase [Brucella melitensis biovar Abortus 2308]
 gi|161619156|ref|YP_001593043.1| alanyl-tRNA synthetase [Brucella canis ATCC 23365]
 gi|163843466|ref|YP_001627870.1| alanyl-tRNA synthetase [Brucella suis ATCC 23445]
 gi|189024350|ref|YP_001935118.1| alanyl-tRNA synthetase [Brucella abortus S19]
 gi|225627671|ref|ZP_03785708.1| alanyl-tRNA synthetase [Brucella ceti str. Cudo]
 gi|237815619|ref|ZP_04594616.1| alanyl-tRNA synthetase [Brucella abortus str. 2308 A]
 gi|254689421|ref|ZP_05152675.1| alanyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
 gi|254693906|ref|ZP_05155734.1| alanyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
 gi|254697556|ref|ZP_05159384.1| alanyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
 gi|254701941|ref|ZP_05163769.1| alanyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
 gi|254704486|ref|ZP_05166314.1| alanyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
 gi|254706618|ref|ZP_05168446.1| alanyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|254710272|ref|ZP_05172083.1| alanyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|254730450|ref|ZP_05189028.1| alanyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
 gi|256031766|ref|ZP_05445380.1| alanyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
 gi|256044851|ref|ZP_05447755.1| alanyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|256061281|ref|ZP_05451431.1| alanyl-tRNA synthetase [Brucella neotomae 5K33]
 gi|256159936|ref|ZP_05457654.1| alanyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|256255167|ref|ZP_05460703.1| alanyl-tRNA synthetase [Brucella ceti B1/94]
 gi|256257667|ref|ZP_05463203.1| alanyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|256369625|ref|YP_003107135.1| alanyl-tRNA synthetase [Brucella microti CCM 4915]
 gi|260168900|ref|ZP_05755711.1| alanyl-tRNA synthetase [Brucella sp. F5/99]
 gi|260546661|ref|ZP_05822400.1| alanyl-tRNA synthetase [Brucella abortus NCTC 8038]
 gi|260565546|ref|ZP_05836030.1| alanyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|260566269|ref|ZP_05836739.1| alanyl-tRNA synthetase [Brucella suis bv. 4 str. 40]
 gi|260754944|ref|ZP_05867292.1| alanine-tRNA ligase [Brucella abortus bv. 6 str. 870]
 gi|260758160|ref|ZP_05870508.1| alanine-tRNA ligase [Brucella abortus bv. 4 str. 292]
 gi|260761986|ref|ZP_05874329.1| alanine-tRNA ligase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260883954|ref|ZP_05895568.1| alanyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|261214196|ref|ZP_05928477.1| alanine-tRNA ligase [Brucella abortus bv. 3 str. Tulya]
 gi|261222364|ref|ZP_05936645.1| alanyl-tRNA synthetase [Brucella ceti B1/94]
 gi|261314078|ref|ZP_05953275.1| alanyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|261317834|ref|ZP_05957031.1| alanyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|261325289|ref|ZP_05964486.1| alanyl-tRNA synthetase [Brucella neotomae 5K33]
 gi|261752508|ref|ZP_05996217.1| alanyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
 gi|261755167|ref|ZP_05998876.1| alanyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
 gi|261758391|ref|ZP_06002100.1| alanyl-tRNA synthetase [Brucella sp. F5/99]
 gi|265988865|ref|ZP_06101422.1| alanyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
 gi|265991279|ref|ZP_06103836.1| alanyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|265998329|ref|ZP_06110886.1| alanyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|297248508|ref|ZP_06932226.1| alanyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196]
 gi|54039648|sp|P67009|SYA_BRUSU RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|54042023|sp|P67008|SYA_BRUME RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|75496699|sp|Q57CU0|SYA_BRUAB RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|123547531|sp|Q2YRU8|SYA_BRUA2 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|205829996|sp|A9M5L7|SYA_BRUC2 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|205829998|sp|B0CGZ9|SYA_BRUSI RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|17982730|gb|AAL51970.1| alanyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|23348036|gb|AAN30120.1| alanyl-tRNA synthetase [Brucella suis 1330]
 gi|62196244|gb|AAX74544.1| AlaS, alanyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941]
 gi|82616136|emb|CAJ11179.1| Alanyl-tRNA synthetase, class IIc:Phosphoesterase,
           DHHA1:Alanyl-transfer RNA synthetase [Brucella
           melitensis biovar Abortus 2308]
 gi|161335967|gb|ABX62272.1| alanyl-tRNA synthetase [Brucella canis ATCC 23365]
 gi|163674189|gb|ABY38300.1| alanyl-tRNA synthetase [Brucella suis ATCC 23445]
 gi|189019922|gb|ACD72644.1| Alanyl-tRNA synthetase, class Iic [Brucella abortus S19]
 gi|225617676|gb|EEH14721.1| alanyl-tRNA synthetase [Brucella ceti str. Cudo]
 gi|237788917|gb|EEP63128.1| alanyl-tRNA synthetase [Brucella abortus str. 2308 A]
 gi|255999787|gb|ACU48186.1| alanyl-tRNA synthetase [Brucella microti CCM 4915]
 gi|260095711|gb|EEW79588.1| alanyl-tRNA synthetase [Brucella abortus NCTC 8038]
 gi|260151614|gb|EEW86708.1| alanyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|260155787|gb|EEW90867.1| alanyl-tRNA synthetase [Brucella suis bv. 4 str. 40]
 gi|260668478|gb|EEX55418.1| alanine-tRNA ligase [Brucella abortus bv. 4 str. 292]
 gi|260672418|gb|EEX59239.1| alanine-tRNA ligase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260675052|gb|EEX61873.1| alanine-tRNA ligase [Brucella abortus bv. 6 str. 870]
 gi|260873482|gb|EEX80551.1| alanyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|260915803|gb|EEX82664.1| alanine-tRNA ligase [Brucella abortus bv. 3 str. Tulya]
 gi|260920948|gb|EEX87601.1| alanyl-tRNA synthetase [Brucella ceti B1/94]
 gi|261297057|gb|EEY00554.1| alanyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|261301269|gb|EEY04766.1| alanyl-tRNA synthetase [Brucella neotomae 5K33]
 gi|261303104|gb|EEY06601.1| alanyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|261738375|gb|EEY26371.1| alanyl-tRNA synthetase [Brucella sp. F5/99]
 gi|261742261|gb|EEY30187.1| alanyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
 gi|261744920|gb|EEY32846.1| alanyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
 gi|262552797|gb|EEZ08787.1| alanyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|263002063|gb|EEZ14638.1| alanyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|264661062|gb|EEZ31323.1| alanyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
 gi|297175677|gb|EFH35024.1| alanyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196]
          Length = 885

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 12/128 (9%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++ EA++          G ++  D   +DF   +P S++EL  +E    EII ++
Sbjct: 564 HSATHLLHEALRETLGTHVAQKGSLVAPDRLRFDFSHPKPISAEELEAVENLANEIILQN 623

Query: 134 SPFLKQYLS-----HEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF--DLCRGP 186
           +P   + ++      E A  LF  +K   +V ++    AK      + G+ +  +LC G 
Sbjct: 624 APVTTRLMAVDDAIAEGAMALF-GEKYGDEVRVVSMGTAKHG---SKAGKAYSVELCGGT 679

Query: 187 HVRSTGQV 194
           HVR TG +
Sbjct: 680 HVRQTGDI 687


>gi|15673694|ref|NP_267868.1| seryl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
 gi|281492294|ref|YP_003354274.1| seryl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
 gi|30173210|sp|Q9CEX2|SYS_LACLA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|12724729|gb|AAK05810.1|AE006401_11 seryl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
 gi|281375958|gb|ADA65449.1| Seryl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
 gi|326407178|gb|ADZ64249.1| seryl-tRNA synthetase [Lactococcus lactis subsp. lactis CV56]
          Length = 423

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 39/172 (22%), Positives = 75/172 (43%), Gaps = 11/172 (6%)

Query: 262 GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           GS  +F+   G ++ + L ++M     K+ Y E+ TP +++Q     +G +  ++ + F 
Sbjct: 160 GSRFLFYKGAGARLERALYNFMLDEHGKEGYTEMITPYMVNQESMFGTGQYPKFKEDTF- 218

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---L 377
                  +KD R F L P         +   +    ELP++       +R+E   +    
Sbjct: 219 ------ELKDDRGFVLIPTAEVPLTNYYRGEILDGAELPIKFTAMSPSFRSEAGSAGRDT 272

Query: 378 HGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
            GL+R+  F + +   F   +Q ++E  K+     +I +  G    +V LST
Sbjct: 273 RGLIRLHQFHKVEMVKFAKPDQSYDELEKMTANAENILQKLGLAYRVVALST 324


>gi|332799217|ref|YP_004460716.1| Prolyl-tRNA synthetase [Tepidanaerobacter sp. Re1]
 gi|332696952|gb|AEE91409.1| Prolyl-tRNA synthetase [Tepidanaerobacter sp. Re1]
          Length = 478

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 75/319 (23%), Positives = 128/319 (40%), Gaps = 55/319 (17%)

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
            A++P +      +++  +KS+R+LPV + ++ +V R E S      +R   F   + H 
Sbjct: 108 LAVRPTSETIICNMYSKWIKSWRDLPVLINQWCNVVRWEKSTK--PFLRTAEFLWQEGHT 165

Query: 394 -FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
              TKE    E L++    + +Y+DF                V +D             L
Sbjct: 166 AHRTKEDAEEEALRM----LEVYRDF----------------VETDL-----------AL 194

Query: 453 DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF-NAFYV 511
             IK    D          GA      E ++ D  GR  Q GT     NL   F  A+ +
Sbjct: 195 PVIKGEKSDNEKFA-----GASKTYTIEALMSD--GRALQAGT---SHNLGQHFAKAYDI 244

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI----TSS 563
               +      + +  +G   R IG ++    ++    +P  ++PIQA++  I    T  
Sbjct: 245 TFLDQDGQLKYVWQTSWGITTRLIGAIVMVHGDDRGLKIPPTIAPIQAVIVPIFGRQTEL 304

Query: 564 AVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
            +    EI   LKS  + IE D R+E T  +K  E  ++ +P+ I  G K+   + + + 
Sbjct: 305 VLNKTNEIFTKLKSE-VRIELDDRDEYTPGWKFNEWEMRGVPVRIEIGPKDIQRQQVVLV 363

Query: 623 RFGSTTTQKVSLLDAIPIL 641
           R  +     VS  + +P L
Sbjct: 364 RRDTGEKFTVSESELLPRL 382


>gi|254714269|ref|ZP_05176080.1| alanyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|261322043|ref|ZP_05961240.1| alanyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|261294733|gb|EEX98229.1| alanyl-tRNA synthetase [Brucella ceti M644/93/1]
          Length = 885

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 12/128 (9%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++ EA++          G ++  D   +DF   +P S++EL  +E    EII ++
Sbjct: 564 HSATHLLHEALRETLGTHVAQKGSLVAPDRLRFDFSHPKPISAEELEAVENLANEIILQN 623

Query: 134 SPFLKQYLS-----HEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF--DLCRGP 186
           +P   + ++      E A  LF  +K   +V ++    AK      + G+ +  +LC G 
Sbjct: 624 APVTTRLMAVDDAIAEGAMALF-GEKYGDEVRVVSMGTAKHG---SKAGKAYSVELCGGT 679

Query: 187 HVRSTGQV 194
           HVR TG +
Sbjct: 680 HVRQTGDI 687


>gi|157111277|ref|XP_001651466.1| bifunctional aminoacyl-tRNA synthetase [Aedes aegypti]
 gi|108878460|gb|EAT42685.1| bifunctional aminoacyl-tRNA synthetase [Aedes aegypti]
          Length = 1702

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 73/308 (23%), Positives = 113/308 (36%), Gaps = 58/308 (18%)

Query: 334  FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
             A++P +       +   ++SYR+LP+RL ++ +V R E        +R R F   + H 
Sbjct: 1304 IAVRPTSETVMYPAYAKWIQSYRDLPIRLNQWNNVVRWEFKHP-QPFLRTREFLWQEGHT 1362

Query: 394  -FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
             F  K     E L I +L   +Y D     ++    T  EK  G D              
Sbjct: 1363 AFGVKADAEQEVLDILDLYAKVYTDLLAIPVVKGRKTEKEKFAGGD-------------- 1408

Query: 453  DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYV 511
                                  Y    E  +  A GR  Q  T   +  N    F+  + 
Sbjct: 1409 ----------------------YTTTVEAFI-SASGRAIQGATSHFLGQNFSKMFDIVF- 1444

Query: 512  NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTT--ITS--- 562
              H E      +++  +G   R IG+MI     N  L L P    IQAI+    IT+   
Sbjct: 1445 -EHPETKEKEYVYQNSWGITTRTIGVMIMVHADNQGLVLPPRVACIQAIIVPCGITANTT 1503

Query: 563  -----SAVEYAQEIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASE 616
                 S  E  +E+   L    +  E D+R N +  +K     +K +PI I  G K+   
Sbjct: 1504 DDERKSLYESCKELEAELVKAGVRCEGDYRDNYSPGWKYNHWELKGVPIRIELGFKDLKN 1563

Query: 617  RS-IGIRR 623
            +  + +RR
Sbjct: 1564 KQFVAVRR 1571


>gi|86160363|ref|YP_467148.1| prolyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|114152165|sp|Q2IGK6|SYP1_ANADE RecName: Full=Prolyl-tRNA synthetase 1; AltName: Full=Proline--tRNA
           ligase 1; Short=ProRS 1
 gi|85776874|gb|ABC83711.1| prolyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 575

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 6/103 (5%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           +E   P +    +W++SG W+    NMF +K  D    D   + L   +     A+    
Sbjct: 70  QEFFLPALHPAEIWKESGRWEVMGDNMFRLK--DRKGGD---YGLGMTHEEIFTAIARDE 124

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           L+SYR+LP    +  + +R+EP     GL+RVR FT  DA+ F
Sbjct: 125 LRSYRQLPQVWYQIQTKFRDEPRPK-SGLLRVRQFTMKDAYSF 166


>gi|330930995|ref|XP_003303228.1| hypothetical protein PTT_15359 [Pyrenophora teres f. teres 0-1]
 gi|330938329|ref|XP_003305730.1| hypothetical protein PTT_18645 [Pyrenophora teres f. teres 0-1]
 gi|311317156|gb|EFQ86197.1| hypothetical protein PTT_18645 [Pyrenophora teres f. teres 0-1]
 gi|311320895|gb|EFQ88675.1| hypothetical protein PTT_15359 [Pyrenophora teres f. teres 0-1]
          Length = 529

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 53/106 (50%), Gaps = 15/106 (14%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT--FALKPMNCPGHVAVFNH 350
           +++   +  + LWQQSG    Y AN   ++     IKD R   F L P +     A+   
Sbjct: 69  KVSLSSITTEALWQQSGR---YSANSELLR-----IKDRRESGFLLSPTHEEEITALVAS 120

Query: 351 GLKSYRELPVRLAEFGSVYRNE--PSGSLHGLMRVRGFTQDDAHVF 394
            + SY++LP+RL + G  YR+E  P G   GL+R + F   D + F
Sbjct: 121 MVHSYKDLPLRLYQIGRKYRDERRPRG---GLLRAKEFVMKDLYTF 163


>gi|291060374|gb|ADD73109.1| alanyl-tRNA synthetase [Treponema pallidum subsp. pallidum str.
           Chicago]
          Length = 649

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 59/125 (47%), Gaps = 10/125 (8%)

Query: 75  HSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           H+  H++ +A++ +    VQ     I  +   +DF   +P S+ E  Q+E+ + E I  D
Sbjct: 507 HTATHLLHQALRVVLGTHVQQKGSNITAERLRFDFSHPRPMSAQEKVQVEQLVNEQIRAD 566

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF-DLCRGPHVRSTG 192
            P   + +S E A     S   A   E  ES      V +Y  G +  ++C GPHV  TG
Sbjct: 567 LPVCCEVMSLEDA---MNSGAVALFGEKYES-----TVKVYSIGTFSREVCGGPHVARTG 618

Query: 193 QVKKF 197
           Q+ +F
Sbjct: 619 QLGRF 623


>gi|224058287|ref|XP_002194154.1| PREDICTED: prolyl-tRNA synthetase 2, mitochondrial (putative)
           [Taeniopygia guttata]
          Length = 470

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 39/160 (24%), Positives = 71/160 (44%), Gaps = 11/160 (6%)

Query: 274 KIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           +  + LI  M  +++    +++N P +    LW+ SG WD     +F +    D      
Sbjct: 90  RAMEKLIQLMDEEMQAVGGQKLNLPSLCSAELWRASGRWDQMGPELFRLVDRHD-----H 144

Query: 333 TFALKPMNCPGHVAVF--NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
            + L P +     A+     GL SY++LP+RL +    +R+EP     GL+R R F   D
Sbjct: 145 GYCLGPTHEEVVTALVASQTGL-SYKQLPLRLYQVTRKFRDEPKPRF-GLLRSREFYMKD 202

Query: 391 AHVFCTKEQMFNECL-KIHNLIISIYKDFGFEKIMVKLST 429
            + F + E+       ++     S++   G   + V+ +T
Sbjct: 203 MYTFDSSEEAARRTYEQVCAAYCSLFARLGLPFVKVQAAT 242


>gi|153869734|ref|ZP_01999269.1| alanyl-tRNA synthetase [Beggiatoa sp. PS]
 gi|152073804|gb|EDN70735.1| alanyl-tRNA synthetase [Beggiatoa sp. PS]
          Length = 357

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 66/147 (44%), Gaps = 21/147 (14%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEK 124
           + R      HS  H++  A++ I  E     G ++E +   +DF   +P +S++LA IE+
Sbjct: 35  EARQATARHHSATHLLHAALRQILGEHVKQKGSLVEPERLRFDFSHFEPITSEQLANIER 94

Query: 125 KMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            + E I  + P   + +S E+A       LF  K +             E V +   G++
Sbjct: 95  LVNEQILLNIPVQTRLMSLEEAMNSGAMALFGEKYD-------------EQVRVLSMGDF 141

Query: 180 -FDLCRGPHVRSTGQVKKFFKLMKVAG 205
             +LC G HVR  G +   FK++   G
Sbjct: 142 STELCGGTHVRQVGDI-GLFKIVAETG 167


>gi|46199782|ref|YP_005449.1| alanyl-tRNA synthetase [Thermus thermophilus HB27]
 gi|48428512|sp|P61707|SYA_THET2 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|46197409|gb|AAS81822.1| alanyl-tRNA synthetase [Thermus thermophilus HB27]
          Length = 882

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 62/140 (44%), Gaps = 13/140 (9%)

Query: 66  DPRSLAVIR-HSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           DPR     R H+  H++  A++++  P V+ A   +  D   +DF   +P   +EL ++E
Sbjct: 564 DPRRRDTERNHTATHLLHAALRAVLGPHVRQAGSLVAPDRLRFDFTHPEPLKPEELERVE 623

Query: 124 KKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGE 178
             +   I  D P   +Y+  E+AR+     LF  K       +       E +      E
Sbjct: 624 LLVNRWIMADFPVTWRYMPLEEARKEGAMALFGEKYGEVVRVVRVEGSPLEGL------E 677

Query: 179 WFDLCRGPHVRSTGQVKKFF 198
             +LC G HVR TG++  F 
Sbjct: 678 SKELCGGCHVRRTGEIGAFL 697


>gi|306840334|ref|ZP_07473106.1| alanyl-tRNA synthetase [Brucella sp. BO2]
 gi|306289733|gb|EFM60922.1| alanyl-tRNA synthetase [Brucella sp. BO2]
          Length = 885

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 12/128 (9%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++ EA++          G ++  D   +DF   +P S++EL  +E    EII ++
Sbjct: 564 HSATHLLHEALRETLGTHVAQKGSLVAPDRLRFDFSHPKPISAEELEAVENLANEIILQN 623

Query: 134 SPFLKQYLS-----HEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF--DLCRGP 186
           +P   + ++      E A  LF  +K   +V ++    AK      + G+ +  +LC G 
Sbjct: 624 APVTTRLMAVDDAITEGAMALF-GEKYGDEVRVVSMGTAKHG---SKAGKAYSVELCGGT 679

Query: 187 HVRSTGQV 194
           HVR TG +
Sbjct: 680 HVRQTGDI 687


>gi|261884369|ref|ZP_06008408.1| alanyl-tRNA synthetase [Campylobacter fetus subsp. venerealis str.
           Azul-94]
          Length = 274

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 61/130 (46%), Gaps = 19/130 (14%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  HI+  A++++        G  +E D   +DF   +P + +EL +IE  + E I + 
Sbjct: 68  HSATHILQAALRNVLGAHIAQAGSSVEADKLRFDFSHPKPVTKEELEKIENFVNEAILKG 127

Query: 134 SPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           +P   + +  + A++     LF  +K A KV +L   P+KE            LC G HV
Sbjct: 128 APAKIEIMDIQNAKKSGAIALF-GEKYADKVRVLTLGPSKE------------LCGGTHV 174

Query: 189 RSTGQVKKFF 198
            +  ++  FF
Sbjct: 175 ENLNEIGSFF 184


>gi|269217138|ref|ZP_06160992.1| proline--tRNA ligase [Slackia exigua ATCC 700122]
 gi|269129275|gb|EEZ60360.1| proline--tRNA ligase [Slackia exigua ATCC 700122]
          Length = 569

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 64/136 (47%), Gaps = 7/136 (5%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANM 318
           ++ SG+  +   G ++   L S +R ++     +EI  P V    LW++SG W +Y   M
Sbjct: 32  KEASGLYSFLPLGMRVLNKLESIIREEMDSHGAQEILMPFVQSSDLWRESGRWGAYGEEM 91

Query: 319 FAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLH 378
              + AD   +    F L P +      +  + L+SY++LP  L +    +R+E      
Sbjct: 92  L--RMAD---RHGNEFCLGPTHEEVVTDLVKNELRSYKDLPRNLYQIQLKFRDERRPRF- 145

Query: 379 GLMRVRGFTQDDAHVF 394
           GL+R R F   DA+ F
Sbjct: 146 GLLRSREFIMKDAYSF 161


>gi|315638099|ref|ZP_07893284.1| alanine--tRNA ligase [Campylobacter upsaliensis JV21]
 gi|315481947|gb|EFU72566.1| alanine--tRNA ligase [Campylobacter upsaliensis JV21]
          Length = 844

 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 69/147 (46%), Gaps = 20/147 (13%)

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIE 123
           E  R      HS  H++  A++ I        G ++E +   +DF+  +  + +EL +IE
Sbjct: 541 EGKREQIARHHSATHLLHYALRKILGAHIAQAGSLVEFNKLRFDFNHPKALTKEELEKIE 600

Query: 124 KKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGE 178
             + E+I+   P L + +S + A++     LF  K E  KV +L              GE
Sbjct: 601 NLVNEMISSSYPALLEEMSLDDAKKSGAIALFSEKYEN-KVRVL------------SLGE 647

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAG 205
             +LC G HV ++ ++  FF ++K +G
Sbjct: 648 SKELCGGTHVNNSAEIGSFF-ILKESG 673


>gi|55981800|ref|YP_145097.1| alanyl-tRNA synthetase [Thermus thermophilus HB8]
 gi|62296736|sp|P74941|SYA_THET8 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|55773213|dbj|BAD71654.1| alanyl-tRNA synthetase [Thermus thermophilus HB8]
          Length = 882

 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 62/140 (44%), Gaps = 13/140 (9%)

Query: 66  DPRSLAVIR-HSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           DPR     R H+  H++  A++++  P V+ A   +  D   +DF   +P   +EL ++E
Sbjct: 564 DPRRRDTERNHTATHLLHAALRAVLGPHVRQAGSLVAPDRLRFDFTHPEPLKPEELERVE 623

Query: 124 KKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGE 178
             +   I  D P   +Y+  E+AR+     LF  K       +       E +      E
Sbjct: 624 LLVNRWIMADFPVTWRYMPLEEARKEGAMALFGEKYGEVVRVVRVEGSPLEGL------E 677

Query: 179 WFDLCRGPHVRSTGQVKKFF 198
             +LC G HVR TG++  F 
Sbjct: 678 SKELCGGCHVRRTGEIGAFL 697


>gi|261839095|gb|ACX98860.1| prolyl-tRNA synthetase [Helicobacter pylori 52]
          Length = 577

 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 42/180 (23%), Positives = 78/180 (43%), Gaps = 11/180 (6%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           + H+ LA+   ++ +   GSG+  +     K+   + +   +++++   + I    V+  
Sbjct: 21  KSHKHLAQAGYIYQV---GSGIYNFLPLAKKVLDKIENITHKRMQEHGAQNILMSFVVLA 77

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SG  D Y   +   K   D       F L P        +  + +KSY++LPV L
Sbjct: 78  SLWEKSGRLDKYGKELLVFKDRKDN-----DFVLSPTLEENITEIAANFIKSYKQLPVHL 132

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKDFGFE 421
            +  + +R+E      GL+R R F   D + F    E +  E L + +    I  D G +
Sbjct: 133 YQIHTKFRDEIRPRF-GLVRAREFIMKDGYSFHEDAESLDKEFLNMQSAYKEILSDLGLD 191


>gi|146329716|ref|YP_001210021.1| prolyl-tRNA synthetase [Dichelobacter nodosus VCS1703A]
 gi|166980118|sp|A5EXK9|SYP_DICNV RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|146233186|gb|ABQ14164.1| prolyl-tRNA synthetase [Dichelobacter nodosus VCS1703A]
          Length = 572

 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 38/165 (23%), Positives = 70/165 (42%), Gaps = 8/165 (4%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +   G+  W   G ++   + + +R ++ +    E+  P      LWQ+SG W +Y  
Sbjct: 32  IRQTAVGIYSWLPLGLRVLNKVSAIIREEMDRAGALEVVMPAAQPAELWQESGRWHAYGP 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            +   +  D   +  R + + P +      +    L SY++LPV L +  + +R+E    
Sbjct: 92  EL--QRFID---RHQRDYCIGPTHEEVVTDLVRRDLSSYKQLPVNLYQIQTKFRDEIRPR 146

Query: 377 LHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGF 420
             G+MR R F   D + F      M N   K+++    I+   G 
Sbjct: 147 F-GVMRGREFVMKDGYSFDLDVAGMKNSYQKMYDAYCRIFDRLGL 190


>gi|317177054|dbj|BAJ54843.1| prolyl-tRNA synthetase [Helicobacter pylori F16]
          Length = 577

 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 42/180 (23%), Positives = 78/180 (43%), Gaps = 11/180 (6%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           + H+ LA+   ++ +   GSG+  +     K+   + +   +++++   + I    V+  
Sbjct: 21  KSHKHLAQAGYIYQV---GSGIYNFLPLAKKVLDKIENITHKRMQEHGAQNILMSFVVLA 77

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SG  D Y   +   K   D       F L P        +  + +KSY++LPV L
Sbjct: 78  SLWEKSGRLDKYGKELLVFKDRKDN-----DFVLSPTLEENITEIAANFIKSYKQLPVHL 132

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT-KEQMFNECLKIHNLIISIYKDFGFE 421
            +  + +R+E      GL+R R F   D + F    E +  E L + +    I  D G +
Sbjct: 133 YQIHTKFRDEIRPRF-GLVRAREFIMKDGYSFHEDAESLDKEFLNMQSAYKEILSDLGLD 191


>gi|302024530|ref|ZP_07249741.1| prolyl-tRNA synthetase [Streptococcus suis 05HAS68]
          Length = 620

 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 30/132 (22%), Positives = 64/132 (48%), Gaps = 7/132 (5%)

Query: 274 KIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           ++ +   + MR +  K D  E   P +L   +W++SG +++Y  +++ +K  + +     
Sbjct: 48  RVIEKAKNIMREEFDKIDAIEFLAPALLSADIWRESGRYETYGDDLYKLKNREGS----- 102

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
            F L P +      +    ++SY++LP+ + +  S YR+E     +GL+R R F   D +
Sbjct: 103 DFILGPTHEETVTLLARDAVQSYKQLPLNIYQIQSKYRDEKR-PRNGLLRGREFIMKDGY 161

Query: 393 VFCTKEQMFNEC 404
            F    +  ++ 
Sbjct: 162 SFHASYESLDQT 173



 Score = 39.7 bits (91), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 30/107 (28%), Positives = 52/107 (48%), Gaps = 7/107 (6%)

Query: 545 NLPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           N P  L+P    +  +     +A+E  Q I   L      + TD RNE +  K  +  + 
Sbjct: 514 NFPKELAPFDVHLIPVNVKDEAAMELTQSIEASLVGAGYEVLTDDRNERVGVKFSDSDLI 573

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKV---SLLDAIPILTKES 645
            +PI +  G K+A++  + ++  G+  T +V    LL+ + ILTKE+
Sbjct: 574 GLPIRVTVG-KKAADGIVEVKIKGTGDTVEVHVDQLLETLQILTKEN 619


>gi|254780191|ref|YP_003064604.1| alanyl-tRNA synthetase [Candidatus Liberibacter asiaticus str.
           psy62]
 gi|254039868|gb|ACT56664.1| alanyl-tRNA synthetase [Candidatus Liberibacter asiaticus str.
           psy62]
          Length = 898

 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 44/183 (24%), Positives = 75/183 (40%), Gaps = 10/183 (5%)

Query: 22  TGSDVAESISRSLA---KKAVAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCA 78
           TG  + + I   +    KKA  + ++  + +      E S+ +      R    I HS  
Sbjct: 531 TGCAIGDGIRLQITDVQKKAEGIFVHHAIVERGILRTEMSLVLTIDYQNRRQLSINHSAT 590

Query: 79  HIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFL 137
           H++  A+ +I    V      I  DG  +D    +P +S EL  IE  + +IIA++ P +
Sbjct: 591 HLLHHALSTILGSHVSQNGSCITPDGLRFDVTHSKPITSAELKSIEDNVNDIIAQNLPVV 650

Query: 138 KQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD--LCRGPHVRSTGQVK 195
            + ++ E A     +     K      + + E    Y  G      LC G HV STG++ 
Sbjct: 651 TRIMNREDAIASGAAALLGTKYNDRVRVVSVE----YEDGGVHSSALCGGTHVSSTGEIM 706

Query: 196 KFF 198
             +
Sbjct: 707 LLY 709


>gi|114152276|sp|Q5E719|SYP_VIBF1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
          Length = 571

 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 40/163 (24%), Positives = 74/163 (45%), Gaps = 10/163 (6%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINT--PQVLDQHLWQQSGHWDSYRANMF 319
            SG+  W   G ++ + + + +R++I D+   I T  P V    LW+++G     R+   
Sbjct: 36  ASGLYTWLPTGLRVLRKVENIVRQEI-DNAGAIETLMPVVQPFELWEETG-----RSEKM 89

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHG 379
             +    T + +R F L P       ++  + + SY++LP+ L +  + +R+E      G
Sbjct: 90  GPELLRFTDRHVRPFVLSPTAEEVITSLVRNEVSSYKQLPLNLYQIQTKFRDERRPRF-G 148

Query: 380 LMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFE 421
           +MR R F   DA+ F   KE +      +H+     +   G E
Sbjct: 149 VMRAREFCMMDAYSFDINKEGLQKSYDAMHDAYCKAFDRMGLE 191


>gi|172087674|ref|YP_204065.3| prolyl-tRNA synthetase [Vibrio fischeri ES114]
 gi|59479390|gb|AAW85177.1| prolyl-tRNA synthetase [Vibrio fischeri ES114]
          Length = 575

 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 40/163 (24%), Positives = 74/163 (45%), Gaps = 10/163 (6%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINT--PQVLDQHLWQQSGHWDSYRANMF 319
            SG+  W   G ++ + + + +R++I D+   I T  P V    LW+++G     R+   
Sbjct: 40  ASGLYTWLPTGLRVLRKVENIVRQEI-DNAGAIETLMPVVQPFELWEETG-----RSEKM 93

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHG 379
             +    T + +R F L P       ++  + + SY++LP+ L +  + +R+E      G
Sbjct: 94  GPELLRFTDRHVRPFVLSPTAEEVITSLVRNEVSSYKQLPLNLYQIQTKFRDERRPRF-G 152

Query: 380 LMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFE 421
           +MR R F   DA+ F   KE +      +H+     +   G E
Sbjct: 153 VMRAREFCMMDAYSFDINKEGLQKSYDAMHDAYCKAFDRMGLE 195


>gi|223933900|ref|ZP_03625863.1| prolyl-tRNA synthetase [Streptococcus suis 89/1591]
 gi|223897426|gb|EEF63824.1| prolyl-tRNA synthetase [Streptococcus suis 89/1591]
          Length = 620

 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 30/132 (22%), Positives = 64/132 (48%), Gaps = 7/132 (5%)

Query: 274 KIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           ++ +   + MR +  K D  E   P +L   +W++SG +++Y  +++ +K  + +     
Sbjct: 48  RVIEKAKNIMREEFDKIDAIEFLAPALLSADIWRESGRYETYGDDLYKLKNREGS----- 102

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
            F L P +      +    ++SY++LP+ + +  S YR+E     +GL+R R F   D +
Sbjct: 103 DFILGPTHEETVTLLARDAVQSYKQLPLNIYQIQSKYRDEKR-PRNGLLRGREFIMKDGY 161

Query: 393 VFCTKEQMFNEC 404
            F    +  ++ 
Sbjct: 162 SFHASYESLDQT 173



 Score = 39.7 bits (91), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 30/107 (28%), Positives = 52/107 (48%), Gaps = 7/107 (6%)

Query: 545 NLPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           N P  L+P    +  +     +A+E  Q I   L      + TD RNE +  K  +  + 
Sbjct: 514 NFPKELAPFDVHLIPVNVKDEAAMELTQSIEASLVGAGYEVLTDDRNERVGVKFSDSDLI 573

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKV---SLLDAIPILTKES 645
            +PI +  G K+A++  + ++  G+  T +V    LL+ + ILTKE+
Sbjct: 574 GLPIRVTVG-KKAADGIVEVKIKGTGDTVEVHVDQLLETLQILTKEN 619


>gi|194910075|ref|XP_001982069.1| GG12386 [Drosophila erecta]
 gi|190656707|gb|EDV53939.1| GG12386 [Drosophila erecta]
          Length = 1712

 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 70/311 (22%), Positives = 119/311 (38%), Gaps = 64/311 (20%)

Query: 334  FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYR---NEPSGSLHGLMRVRGFTQDD 390
             A++P +       +   ++SYR+LP+RL ++ +V R    +P+      +R R F   +
Sbjct: 1315 IAVRPTSETVMYPAYAKWVQSYRDLPIRLNQWNNVVRWEFKQPT----PFLRTREFLWQE 1370

Query: 391  AHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMK 449
             H  F  KE+   E L I +L   +Y       ++    T  EK  G D           
Sbjct: 1371 GHTAFADKEEAAKEVLDILDLYALVYTHLLAIPVVKGRKTEKEKFAGGD----------- 1419

Query: 450  GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNA 508
                                     Y    E  +  A GR  Q  T   +  N    F  
Sbjct: 1420 -------------------------YTTTVEAFI-SASGRAIQGATSHHLGQNFSKMFEI 1453

Query: 509  FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVT----TI 560
             Y +  +++     +++  +G   R IG+MI     N  L L P    IQAIV     T+
Sbjct: 1454 VYEDPETQQKK--YVYQNSWGITTRTIGVMIMVHADNQGLVLPPHVACIQAIVVPCGITV 1511

Query: 561  TSSAVEYAQ------EIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKE 613
             +   E AQ      ++   L    +  E D+R N +  +K     +K +P+ +  G K+
Sbjct: 1512 NTKDDERAQLLDACKDLEKRLVGGGVRCEGDYRDNYSPGWKFNHWELKGVPLRLEVGPKD 1571

Query: 614  -ASERSIGIRR 623
              +++ + +RR
Sbjct: 1572 LKAKQLVAVRR 1582


>gi|260905197|ref|ZP_05913519.1| prolyl-tRNA synthetase [Brevibacterium linens BL2]
          Length = 615

 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 39/159 (24%), Positives = 75/159 (47%), Gaps = 18/159 (11%)

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQV 299
           +E   H+ L R     +I     G+  W   G ++   + + +R ++ +   +E++ P +
Sbjct: 20  AEVASHKLLHRAG---YIRRSAPGIYTWLPLGLQVLGKIEAIVREEMARAGSQEVHFPGL 76

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----SY 355
           L    +++SG W+++  ++F +K   D    L          P H  VF   +K    SY
Sbjct: 77  LPADPYRKSGRWEAFGPDLFHLKDRKDNDYIL---------APTHEEVFTLLVKDLYSSY 127

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           ++LP+ + +  + YR+E +    GL+R R F   DA+ F
Sbjct: 128 KDLPLSIYQVQTKYRDE-ARPRAGLLRGREFIMKDAYSF 165


>gi|319779147|ref|YP_004130060.1| Prolyl-tRNA synthetase [Taylorella equigenitalis MCE9]
 gi|317109171|gb|ADU91917.1| Prolyl-tRNA synthetase [Taylorella equigenitalis MCE9]
          Length = 582

 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/184 (22%), Positives = 84/184 (45%), Gaps = 11/184 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+E   H+ + R      I + G+G+  +   G+K+ + + + +R ++ +    E+  P 
Sbjct: 17  EAEVVSHKYMLRAG---MIRKLGAGIYTYMPLGFKVLKKVEAIVREEMNRAGAIELLMPI 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    LW ++  W++Y   +   K      +  R F ++P +      +  + + S+R+L
Sbjct: 74  VQPAELWMKTERWNAYGPELLRFKD-----RHSRDFIIQPTSEEVITDIVANEVHSWRQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN-ECLKIHNLIISIYKD 417
           P+      + +R+E      GLMR R F   DA+ F   E+  N    K+++  + I+  
Sbjct: 129 PLNFYHIQTKFRDERRPRF-GLMRGREFLMKDAYSFDRTEEEANISYQKMYDAYVRIFTR 187

Query: 418 FGFE 421
            G +
Sbjct: 188 LGLK 191


>gi|124265710|ref|YP_001019714.1| prolyl-tRNA synthetase [Methylibium petroleiphilum PM1]
 gi|152112930|sp|A2SD40|SYP_METPP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|124258485|gb|ABM93479.1| prolyl-tRNA synthetase [Methylibium petroleiphilum PM1]
          Length = 581

 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 34/134 (25%), Positives = 63/134 (47%), Gaps = 7/134 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           G+G+  +   G ++ + + + +R ++ +    E+  P V    LWQ++G ++     +  
Sbjct: 36  GAGIYSYMPMGLRVIRKVEAIIREEMNRAGAVELLMPVVQPAELWQETGRFEKMGPELMR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           VK   D     R F ++P +      +    L+SYR+LP       + +R+E      G+
Sbjct: 96  VKDRHD-----RDFIIQPTSEEVVTDIARQELRSYRQLPKNFYHIQTKFRDERRPRF-GV 149

Query: 381 MRVRGFTQDDAHVF 394
           MR R FT  DA+ F
Sbjct: 150 MRGREFTMKDAYSF 163


>gi|289809607|ref|ZP_06540236.1| hypothetical protein Salmonellaentericaenterica_36347 [Salmonella
           enterica subsp. enterica serovar Typhi str. AG3]
          Length = 70

 Score = 48.1 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 20/58 (34%), Positives = 34/58 (58%)

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           RNE I +KIREH+++++P +++CGDKE     + +R         + + D I  L +E
Sbjct: 2   RNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTRRGKDLGSLDVNDVIEKLQQE 59


>gi|167749838|ref|ZP_02421965.1| hypothetical protein EUBSIR_00806 [Eubacterium siraeum DSM 15702]
 gi|167657150|gb|EDS01280.1| hypothetical protein EUBSIR_00806 [Eubacterium siraeum DSM 15702]
          Length = 589

 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 62/130 (47%), Gaps = 14/130 (10%)

Query: 288 KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
           K D +E+  P V+   LWQ+SG ++S  + +        T ++     L   +    V +
Sbjct: 78  KIDGQEVQFPVVMPASLWQESGRYESIGSELLRF-----TDRNRMPMVLGMTHEEAAVHL 132

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNE--PSGSLHGLMRVRGFTQDDAHVFCTK----EQMF 401
                KSY + P  + +  + +R+E  P G   GL+RVR FT  DA+ F T     EQ +
Sbjct: 133 VREYGKSYTKYPFMIYQIQTKFRDEARPRG---GLIRVREFTMKDAYSFHTSQEDLEQYY 189

Query: 402 NECLKIHNLI 411
           ++C K +  I
Sbjct: 190 DKCHKAYENI 199


>gi|1565288|emb|CAA69650.1| alanyl-tRNA synthatase [Thermus thermophilus]
          Length = 882

 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 62/140 (44%), Gaps = 13/140 (9%)

Query: 66  DPRSLAVIR-HSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           DPR     R H+  H++  A++++  P V+ A   +  D   +DF   +P   +EL ++E
Sbjct: 564 DPRRRDTERNHTATHLLHAALRAVLGPHVRQAGSLVAPDRLRFDFTHPEPLKPEELERVE 623

Query: 124 KKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGE 178
             +   I  D P   +Y+  E+AR+     LF  K       +       E +      E
Sbjct: 624 LLVNRWIMADFPVTWRYMPLEEARKEGAMALFGEKYGEVVRVVRVEGSPLEGL------E 677

Query: 179 WFDLCRGPHVRSTGQVKKFF 198
             +LC G HVR TG++  F 
Sbjct: 678 SKELCGGCHVRRTGEIGAFL 697


>gi|330833575|ref|YP_004402400.1| prolyl-tRNA synthetase [Streptococcus suis ST3]
 gi|329307798|gb|AEB82214.1| prolyl-tRNA synthetase [Streptococcus suis ST3]
          Length = 615

 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 30/132 (22%), Positives = 64/132 (48%), Gaps = 7/132 (5%)

Query: 274 KIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           ++ +   + MR +  K D  E   P +L   +W++SG +++Y  +++ +K      ++  
Sbjct: 43  RVIEKAKNIMREEFDKIDAIEFLAPALLSADIWRESGRYETYGDDLYKLKN-----REGS 97

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
            F L P +      +    ++SY++LP+ + +  S YR+E     +GL+R R F   D +
Sbjct: 98  DFILGPTHEETVTLLARDAVQSYKQLPLNIYQIQSKYRDEKR-PRNGLLRGREFIMKDGY 156

Query: 393 VFCTKEQMFNEC 404
            F    +  ++ 
Sbjct: 157 SFHASYESLDQT 168



 Score = 39.7 bits (91), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 30/107 (28%), Positives = 52/107 (48%), Gaps = 7/107 (6%)

Query: 545 NLPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           N P  L+P    +  +     +A+E  Q I   L      + TD RNE +  K  +  + 
Sbjct: 509 NFPKELAPFDVHLIPVNVKDEAAMELTQSIEASLVGAGYEVLTDDRNERVGVKFSDSDLI 568

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKV---SLLDAIPILTKES 645
            +PI +  G K+A++  + ++  G+  T +V    LL+ + ILTKE+
Sbjct: 569 GLPIRVTVG-KKAADGIVEVKIKGTGDTVEVHVDQLLETLQILTKEN 614


>gi|295401328|ref|ZP_06811299.1| Threonyl/alanyl tRNA synthetase SAD [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|294976543|gb|EFG52150.1| Threonyl/alanyl tRNA synthetase SAD [Geobacillus
           thermoglucosidasius C56-YS93]
          Length = 238

 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 80/159 (50%), Gaps = 11/159 (6%)

Query: 44  NGKVCDLSDPV---REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIG-PI 99
           NG++    D +   ++G +EI+   D R   +  HS  H++A  + + +    +AIG  I
Sbjct: 64  NGQIVHYVDNIEKLKQGPVEILIDWDRRYKFMRYHSLLHVLAGYLYNKFG--ALAIGNQI 121

Query: 100 IEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKV 159
            ED    DF  E+P ++++  +IE ++ ++I  D     + +S E+A  +  S K    +
Sbjct: 122 FEDRARIDFQFEEPLTNEQFNEIEDEINKLIQEDHQVSIRTVSREEAERIDGSIKTV--I 179

Query: 160 EILESIPAKENVTLYRQGEWFD-LCRGPHVRSTGQVKKF 197
            +L   P+ +NV L   G+  +  C G HV+ T ++  F
Sbjct: 180 NLLP--PSIKNVRLVAIGDIDEQACGGTHVKETKEIGPF 216


>gi|124486203|ref|YP_001030819.1| prolyl-tRNA synthetase [Methanocorpusculum labreanum Z]
 gi|152112928|sp|A2ST96|SYP_METLZ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|124363744|gb|ABN07552.1| prolyl-tRNA synthetase [Methanocorpusculum labreanum Z]
          Length = 477

 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 75/398 (18%), Positives = 164/398 (41%), Gaps = 58/398 (14%)

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVL-DQHL 304
           + ++ R  D+  +     G+  W+  G+ +     + +R  +  D+EE   P ++ +   
Sbjct: 18  YNEVIRRADIMDVRYPVKGLYVWYPFGFALRNHTYTLLRSLLNRDHEETLFPLLIPETEF 77

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
            +++ H   +   ++ V     +  D++  AL+P +      ++   ++S+ +LP++L +
Sbjct: 78  MKEAEHIKGFEDEVYWVTHGGLSPLDVK-LALRPTSETAIYPMYALWVRSHADLPLKLYQ 136

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQ-DDAHVFCTKEQMFNECLKIH-NLIISIYKDFGFEK 422
             + +R E   +   L+R+R  T   ++H   T     N+ ++    L    Y+D G   
Sbjct: 137 VVNTFRYETKHT-RPLIRLREITSFMESHTVHTDWDDANKQVEYELGLATEFYRDLG--- 192

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + + +S RP+        WD                             GA +    + +
Sbjct: 193 VPIIISRRPD--------WDKF--------------------------PGADFTMAIDAV 218

Query: 483 LKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE- 540
           + D  GR  Q GT+  +  +  + +N  Y + + E+    +  +  FG  ER I  +I  
Sbjct: 219 MPD--GRTLQIGTVHHLGDHFSTTYNITYEDVNGEQ---KLASQTCFGISERCIAAIIAV 273

Query: 541 --NFKG-NLPLWLSPIQAIVTTIT-----SSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
             + KG  LP  ++P Q ++  I         +   +++ + LK+  L ++TD R+    
Sbjct: 274 HGDDKGLVLPATVAPTQVVIIPIIVGKRGDEIMAAVEKLESELKAAGLRVKTDARDMRPG 333

Query: 593 YKIREHSIKKIPIIIICGDKEA-SERSIGIRRFGSTTT 629
            K     +  +P+ +  G ++  + + +   R G  TT
Sbjct: 334 AKYYHWELHGVPLRVELGPRDLDNNQLVCANRLGVKTT 371


>gi|327270906|ref|XP_003220229.1| PREDICTED: probable prolyl-tRNA synthetase, mitochondrial-like
           [Anolis carolinensis]
          Length = 472

 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 34/140 (24%), Positives = 64/140 (45%), Gaps = 8/140 (5%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV-AVFNH 350
           +++N P +    LW+ SG W+     +  +K      +  + + L P +       + + 
Sbjct: 112 QKMNMPTLCSAKLWRDSGRWELMGKELLRMK-----DRHGQEYCLGPTHEEAITDLIASQ 166

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHN 409
           G  SY++LP+ L +    +R+EP     GL+R R F   D + F  +KE        + N
Sbjct: 167 GCLSYKQLPLLLYQVTRKFRDEPKPRF-GLLRGREFYMKDMYTFDASKEAALQTYECVSN 225

Query: 410 LIISIYKDFGFEKIMVKLST 429
              +I+ + G + I V+ +T
Sbjct: 226 AYSNIFNNLGLQFIKVQAAT 245


>gi|260654799|ref|ZP_05860287.1| phosphoribulokinase/uridine kinase family protein [Jonquetella
           anthropi E3_33 E1]
 gi|260630514|gb|EEX48708.1| phosphoribulokinase/uridine kinase family protein [Jonquetella
           anthropi E3_33 E1]
          Length = 545

 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 23/98 (23%), Positives = 53/98 (54%), Gaps = 1/98 (1%)

Query: 100 IEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKV 159
           I D  Y+ F+     +  ++A I+ +++ ++A D P  ++ LS +K   +F ++ +    
Sbjct: 96  ISDALYWVFNDGTAMTPSDVASIDAELRRLVAADMPIQREILSLDKVVRIFNAQGKQDTA 155

Query: 160 EILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
           ++L ++ A + V +YR  + +    GP + S G++ +F
Sbjct: 156 KLL-ALTAVDPVEVYRSADLYCCFYGPLMPSMGELDRF 192


>gi|325962798|ref|YP_004240704.1| prolyl-tRNA synthetase, family II [Arthrobacter phenanthrenivorans
           Sphe3]
 gi|323468885|gb|ADX72570.1| prolyl-tRNA synthetase, family II [Arthrobacter phenanthrenivorans
           Sphe3]
          Length = 603

 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 42/191 (21%), Positives = 81/191 (42%), Gaps = 17/191 (8%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   HR L R     +I     G+  W   G  + + + + +R ++     +E++ P 
Sbjct: 19  DAEVASHRLLVRA---GYIRRAAPGIYTWLPLGLSVLRKVEAVIREEMAAIGAQEVHFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAV---KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           +L +  ++ +  W  Y   +F +   K AD        + L P +      +      SY
Sbjct: 76  LLPREPYEATNRWTEYGEGLFRLQDRKGAD--------YLLAPTHEEMFTLLVKDLYSSY 127

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH-NLIISI 414
           ++LP+ L +  + YR+E +    GL+R R F   D++ F   +   +     H    + I
Sbjct: 128 KDLPLSLYQIQNKYRDE-ARPRAGLLRGREFIMKDSYSFDVDDAGLDASYAAHRGAYLRI 186

Query: 415 YKDFGFEKIMV 425
           ++  G E I V
Sbjct: 187 FERLGLEVIPV 197


>gi|224537666|ref|ZP_03678205.1| hypothetical protein BACCELL_02548 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224520725|gb|EEF89830.1| hypothetical protein BACCELL_02548 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 557

 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/151 (19%), Positives = 73/151 (48%), Gaps = 1/151 (0%)

Query: 15  KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVI 73
           K FP+ ++  D+    + +   + V+  +N +   L+  V     +E +   D   L   
Sbjct: 16  KEFPIGSSLLDIYYGFNLNFPYQVVSAKVNNRSEGLNFRVYNNKDVEFLDIRDSSGLRTY 75

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
             S   ++ +AV  ++P+ ++ +   +  G++ +    +  + ++++ I+K+MQEII ++
Sbjct: 76  VRSLCFVLYKAVNELFPDGKLFVEHPVSKGYFCNLRIGRTITLEDVSAIKKRMQEIIDKN 135

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILES 164
             + +      +A  +F  +    KV++LE+
Sbjct: 136 ITYRRTECHTTEAVRIFNERGMTDKVKLLET 166


>gi|325571083|ref|ZP_08146655.1| proline--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
 gi|325156168|gb|EGC68354.1| proline--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
          Length = 569

 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 40/184 (21%), Positives = 81/184 (44%), Gaps = 11/184 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +  +A   +G+  +     ++ + +   +R ++ + D  E+  P 
Sbjct: 17  DAETLSHQLLVRAGYIRQVA---AGIYVYLPLAQRVLEKIKRVIREELAEIDAVEMAMPS 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L    W++SG     RA+++       T ++ R   L P +      +  + + SY+ L
Sbjct: 74  LLPYEPWKESG-----RASLYGESLYRLTDRNEREIVLGPTHEEPFTTLIKNEITSYKRL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII-SIYKD 417
           P+ L +  + YR+E      GL+R R F   D + F   E   ++    + +   +I K 
Sbjct: 129 PLSLYQIQTKYRDEQRPRF-GLIRSREFIMQDGYSFHADEASLDQTYNRYEMAYHAILKR 187

Query: 418 FGFE 421
            G E
Sbjct: 188 CGIE 191


>gi|225016294|ref|ZP_03705486.1| hypothetical protein CLOSTMETH_00197 [Clostridium methylpentosum
           DSM 5476]
 gi|224950969|gb|EEG32178.1| hypothetical protein CLOSTMETH_00197 [Clostridium methylpentosum
           DSM 5476]
          Length = 574

 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 79/160 (49%), Gaps = 11/160 (6%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
           +I + G+G+        +I   + + +R ++   D +E+  P VL + LW +SG ++S  
Sbjct: 38  YIRQVGNGIYSMLMPTKRIVNKIENIIREEMDAIDGQEVLFPVVLPRELWDESGRYESVG 97

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
           + +  V+  D +  D   + L   +    V +  +  +SY + P  + +  + +R+EP  
Sbjct: 98  SEL--VRFHDRSGGD---YVLGMTHEEAAVHLARNEAQSYAKYPFMIYQIQTKFRDEPR- 151

Query: 376 SLHGLMRVRGFTQDDAHVFCTK----EQMFNECLKIHNLI 411
           S  GL+RVR FT  DA+ F T     E+ ++ C K +  I
Sbjct: 152 SRGGLIRVREFTMKDAYSFHTSQEDLERYYDICHKAYERI 191


>gi|261219548|ref|ZP_05933829.1| alanyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|260924637|gb|EEX91205.1| alanyl-tRNA synthetase [Brucella ceti M13/05/1]
          Length = 723

 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 12/128 (9%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++ EA++          G ++  D   +DF   +P S++EL  +E    EII ++
Sbjct: 402 HSATHLLHEALRETLGTHVAQKGSLVAPDRLRFDFSHPKPISAEELEAVENLANEIILQN 461

Query: 134 SPFLKQYLS-----HEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF--DLCRGP 186
           +P   + ++      E A  LF  +K   +V ++    AK      + G+ +  +LC G 
Sbjct: 462 APVTTRLMAVDDAIAEGAMALF-GEKYGDEVRVVSMGTAKHG---SKAGKAYSVELCGGT 517

Query: 187 HVRSTGQV 194
           HVR TG +
Sbjct: 518 HVRQTGDI 525


>gi|37680756|ref|NP_935365.1| prolyl-tRNA synthetase [Vibrio vulnificus YJ016]
 gi|81859846|sp|Q7MIE5|SYP_VIBVY RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|37199505|dbj|BAC95336.1| prolyl-tRNA synthetase [Vibrio vulnificus YJ016]
          Length = 571

 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 65/134 (48%), Gaps = 9/134 (6%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINT--PQVLDQHLWQQSGHWDSYRANMFA 320
           SG+  W   G ++ + + + +R++I D+   I T  P V    LW+++G     R+    
Sbjct: 37  SGLYTWLPTGLRVLRKVENIVRQEI-DNAGAIETLMPVVQPFELWEETG-----RSEKMG 90

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +    T + +R F L P       A+  + + SY++LP+ L +  + +R+E      G+
Sbjct: 91  PELLRFTDRHVRPFVLSPTAEEVITALVRNEVSSYKQLPINLYQIQTKFRDERRPRF-GV 149

Query: 381 MRVRGFTQDDAHVF 394
           MR R F   DA+ F
Sbjct: 150 MRAREFCMMDAYSF 163


>gi|78778894|ref|YP_397006.1| prolyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312]
 gi|114152228|sp|Q31C25|SYP_PROM9 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|78712393|gb|ABB49570.1| prolyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312]
          Length = 600

 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 63/134 (47%), Gaps = 10/134 (7%)

Query: 297 PQVLDQHLWQQSGHWDSYRAN---MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           PQ+   +LW++S  W+ Y A    MF +K      +  + F L P +     ++ +  + 
Sbjct: 73  PQLHPANLWKKSERWEGYTAGEGIMFNLKD-----RQGKEFGLAPTHEEVITSIASEIIN 127

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLII 412
           SY++LP    +  + +R+E      GLMR R F   D + F + E+       K+ N   
Sbjct: 128 SYKQLPQCFYQIQTKFRDEIRPRF-GLMRSREFIMKDGYSFHSSEKDLASFYEKVGNAYE 186

Query: 413 SIYKDFGFEKIMVK 426
           +I+K  G E + V+
Sbjct: 187 NIFKSCGLETVGVE 200


>gi|319786629|ref|YP_004146104.1| alanyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1]
 gi|317465141|gb|ADV26873.1| alanyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1]
          Length = 882

 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 35/139 (25%), Positives = 64/139 (46%), Gaps = 10/139 (7%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKM 126
           R   V+ HS  H++  A++ +    VQ     +  D   +DF   QP +++E+A+IE+ +
Sbjct: 564 RRAIVLNHSATHLLHGALRGLLGTHVQQKGSLVAPDRLRFDFSHFQPVNAEEVARIERMV 623

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGP 186
            + +  +   + Q +  ++A +L        K          E V + + GE  +LC G 
Sbjct: 624 NDEVRANHAVVIQQMGIQEALDLGAMALFGEKY--------GERVRVVKMGESVELCGGT 675

Query: 187 HVRSTGQVKKFFKLMKVAG 205
           HV  TG +   FK++   G
Sbjct: 676 HVARTGDI-GLFKIVSEGG 693


>gi|302894055|ref|XP_003045908.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256726835|gb|EEU40195.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 555

 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 86/383 (22%), Positives = 157/383 (40%), Gaps = 68/383 (17%)

Query: 274 KIFQTLISYMRRKIKDDYEEINTPQVLD-QHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           K FQ  I  M        +E N P  L  + L ++  H + +   +  V  A D  KDL 
Sbjct: 97  KWFQAHIEEM------GVDETNFPMFLSSKSLEKEKDHVEGFAPELAWVTKAGD--KDLE 148

Query: 333 T-FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
              A++P +       ++  ++S+R+LP+RL ++ SV R E   +    +R R F   + 
Sbjct: 149 VPVAVRPTSEAVMYPYYSKWIRSHRDLPLRLNQWNSVVRWEAKQTTP-FLRTREFLWQEG 207

Query: 392 HVFCTKEQMFN-ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKG 450
           H     E++   E L+I  L   +Y     EK++                   A  +++G
Sbjct: 208 HTAHLTEELAGVEVLEILELYAGVY-----EKLL-------------------AVPVVRG 243

Query: 451 VLDTIKNSSQDRINTGVLLGEGAFYGPKFE-YILKDAIGRDWQCGTIQ-VDFNLPSRFNA 508
                + +  ++         G +Y    E YI  +  GR  Q  T   +  N    F+ 
Sbjct: 244 -----RKTENEKF-------AGGYYTTTVEGYIPSN--GRGIQGATSHALGQNFSKMFDI 289

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMI---ENFKG-NLPLWLSPIQAIVTTI---- 560
              +  ++  H + + +  +G   R IG+M+    + KG  LP  ++  QAI+  +    
Sbjct: 290 TVEDPQNKGSH-LHVWQNSWGLSTRVIGVMVMIHGDDKGLVLPPRVAKTQAIIIPVGINK 348

Query: 561 --TSSA----VEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKE 613
             T  A     E   EI   LK   + +E+D+R+  T  +K  +  +K +P+ +  G K+
Sbjct: 349 NTTPEARKQHEEQVDEIRATLKKAGVRVESDWRDGYTPAWKFNDWELKGVPVRLEFGPKD 408

Query: 614 ASERSIGIRRFGSTTTQKVSLLD 636
           A++  +   R  +     + + D
Sbjct: 409 AAKEVVSYARRDTGEKGTIPIAD 431


>gi|157113278|ref|XP_001657756.1| mitochondrial 39S ribosomal protein L39 [Aedes aegypti]
 gi|108877801|gb|EAT42026.1| mitochondrial 39S ribosomal protein L39 [Aedes aegypti]
          Length = 333

 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 57/245 (23%), Positives = 110/245 (44%), Gaps = 29/245 (11%)

Query: 21  ATGSDVAESISRSLAK-KAVAVAINGKVCDLSDPVREG-SIEII--TPEDPRSL-AVIRH 75
           +T  D A+ I     +  A+A+  N    D+  P+ E  +++++  T  DP  +      
Sbjct: 77  STPHDCAKHIGEKYCRFSALALLDNNTAWDMRRPLEESCTLQLLNFTSADPHLVNKACWR 136

Query: 76  SCAHIMAEAVQSIW-----------PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           +C+ ++   +   +           P+  V  G  + D      +  +P +S EL  +  
Sbjct: 137 TCSFLLGSVLHKSFKDEAGLFLHSFPKPNVKTGSFVHD-IALSKNGWKP-TSQELRALSI 194

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN--VTLYRQGEWFDL 182
           +M ++  +D P  +  ++ E A+++F      YK E + SI ++ N  +T+YR G+  D+
Sbjct: 195 EMIKLSQQDLPIERLDVTSEVAQQMFSDN--PYKREQIPSISSQNNGLITVYRVGDHVDI 252

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYW--RGDSNRPMLSRIYGTAWNTQQELTQYLY-FLE 239
            +GP V STG V K      +A  +   +  +++  L R+ G A      L  + Y  LE
Sbjct: 253 SKGPMVSSTGLVGK----CTIAAIHEVPKSSADKLSLYRVQGVALPIGLNLNHFAYGILE 308

Query: 240 ESEKR 244
           +  K+
Sbjct: 309 DRAKK 313


>gi|39996560|ref|NP_952511.1| prolyl-tRNA synthetase [Geobacter sulfurreducens PCA]
 gi|81832056|sp|Q74D59|SYP_GEOSL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|39983441|gb|AAR34834.1| prolyl-tRNA synthetase [Geobacter sulfurreducens PCA]
 gi|298505576|gb|ADI84299.1| prolyl-tRNA synthetase [Geobacter sulfurreducens KN400]
          Length = 570

 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 45/102 (44%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P V    LWQ+S  W+ Y   +   K   D       F L P +      +    +
Sbjct: 68  ELLMPSVQPAELWQESTRWEQYGKELLRFKDRKDA-----EFCLGPTHEEVVTDIVRREV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSYR++P  L +  + +R+E      GLMR R F   DA+ F
Sbjct: 123 KSYRQMPFNLYQIQAKFRDEIRPRF-GLMRGREFIMKDAYSF 163


>gi|222823773|ref|YP_002575347.1| prolyl-tRNA synthetase [Campylobacter lari RM2100]
 gi|254782892|sp|B9KGB1|SYP_CAMLR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|222538995|gb|ACM64096.1| prolyl-tRNA synthetase [Campylobacter lari RM2100]
          Length = 565

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 34/142 (23%), Positives = 65/142 (45%), Gaps = 7/142 (4%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I + GSG+  +   G ++   + + ++ ++ K    E+N        LW++SG ++ +  
Sbjct: 32  IEQIGSGLYNFLPLGKRVLDKIKNIIKEEMDKAGALEVNLSFNTPAELWKESGRFNVFGK 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            +   K   +       F L P +    VA+  + + SY++LP+ L + G  +R+E    
Sbjct: 92  ELLRFKDRKEN-----DFVLGPTHEEAMVALIRNKITSYKQLPLHLYQIGLKFRDEARPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTKE 398
             GL+R R F   D + F   E
Sbjct: 147 F-GLLRCREFLMKDGYSFHASE 167


>gi|149190039|ref|ZP_01868316.1| prolyl-tRNA synthetase [Vibrio shilonii AK1]
 gi|148836069|gb|EDL53029.1| prolyl-tRNA synthetase [Vibrio shilonii AK1]
          Length = 571

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 38/162 (23%), Positives = 73/162 (45%), Gaps = 10/162 (6%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINT--PQVLDQHLWQQSGHWDSYRANMFA 320
           SG+  W   G ++ + + + +R++I D+   + T  P V    LW+++G  +   A +  
Sbjct: 37  SGLYTWLPTGLRVLRKVENIVRQEI-DNAGAVETLMPVVQPFELWEETGRSEKMGAELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
                 T +  R F L P       ++  + + SY++LP+ L +  + +R+E      G+
Sbjct: 96  F-----TDRHTRPFVLSPTAEEVITSLVRNEVSSYKQLPLNLYQIQTKFRDERRPRF-GV 149

Query: 381 MRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFE 421
           MR R F+  DA+ F   KE +      +H      +   G +
Sbjct: 150 MRAREFSMMDAYSFDIDKEGLEKSYQAMHEAYCKAFDRMGLD 191


>gi|225619417|ref|YP_002720643.1| prolyl-tRNA synthetase [Brachyspira hyodysenteriae WA1]
 gi|254782887|sp|C0QY98|SYP_BRAHW RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|225214236|gb|ACN82970.1| prolyl-tRNA synthetase [Brachyspira hyodysenteriae WA1]
          Length = 578

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 31/131 (23%), Positives = 61/131 (46%), Gaps = 7/131 (5%)

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P ++ + L   SG W+ ++  +F +K  +D        A+ P +         + ++SY+
Sbjct: 72  PILVSKELLTPSGRWERFKKELFRLKDRNDV-----DMAMGPTHEEAFTITAQNEIQSYK 126

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIY 415
           + P+ L +  + +R+E      G++R + FT  DA+ F  TKE +      +      I+
Sbjct: 127 DFPLTLYQIHTKFRDEIRPRF-GVIRSKEFTMKDAYSFHITKECLDKTYNDMSGAYTKIF 185

Query: 416 KDFGFEKIMVK 426
           K  G + + VK
Sbjct: 186 KRMGLDTVSVK 196



 Score = 41.2 bits (95), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 60/127 (47%), Gaps = 13/127 (10%)

Query: 518 CHPVMIHRAVFGSIERFI---GIMIENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEI 571
           C+ + ++RA+   IE+     GI+        P+ ++P +AIV  I   T  + + A+EI
Sbjct: 441 CYGIGVNRALASVIEQNYDDKGII-------FPISVAPYEAIVVAIDKETEDSFKKAEEI 493

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
            N L S  +    D R E +  K+ +  +  IPI II G K   +  +  +   S  + +
Sbjct: 494 YNTLNSIGVETMFDDRKERLGVKLNDCDLIGIPIRIIVGKKSLQKGVVEFKLRKSQESVE 553

Query: 632 VSLLDAI 638
           V + D I
Sbjct: 554 VKVEDII 560


>gi|108562666|ref|YP_626982.1| prolyl-tRNA synthetase [Helicobacter pylori HPAG1]
 gi|123373844|sp|Q1CUR4|SYP_HELPH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|107836439|gb|ABF84308.1| prolyl-tRNA synthetase [Helicobacter pylori HPAG1]
          Length = 577

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 42/180 (23%), Positives = 77/180 (42%), Gaps = 11/180 (6%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           + H+ LA+   ++ +   GSG+  +     K+   + +   +++++   + I    V+  
Sbjct: 21  KSHKHLAQAGYIYQV---GSGIYNFLPLAKKVLDKIENITHKRMQEHGAQNILMSFVVLA 77

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SG  D Y   +   K   D       F L P        +  + +KSY++LPV L
Sbjct: 78  SLWEKSGRLDKYGKELLVFKDRKDN-----DFVLSPTLEENITEIAANFIKSYKQLPVHL 132

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT-KEQMFNECLKIHNLIISIYKDFGFE 421
            +  + +R+E      GL+R R F   D + F    E +  E L   +    I  D G +
Sbjct: 133 YQIHTKFRDEIRPRF-GLVRAREFIMKDGYSFHEDAESLDKEFLNTQSAYKEILNDLGLD 191


>gi|260220337|emb|CBA27773.1| Prolyl-tRNA synthetase [Curvibacter putative symbiont of Hydra
           magnipapillata]
          Length = 580

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 31/134 (23%), Positives = 64/134 (47%), Gaps = 7/134 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           G+G+  +   G ++ + + + +R ++ +    E+  P +    LWQ++G +D     +  
Sbjct: 36  GAGIYNYMPMGLRVIRKVEAIVREEMNRAGAVELTMPVIQPAELWQETGRFDKMGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +K   +     R + ++P +      +    +KSY++LP  L +  + +R+E      GL
Sbjct: 96  IKDRHE-----RDYVVQPTSEEVVTDIARQEIKSYKQLPKNLYQIQTKFRDERRPRF-GL 149

Query: 381 MRVRGFTQDDAHVF 394
           MR R F   DA+ F
Sbjct: 150 MRGREFIMKDAYSF 163


>gi|210134438|ref|YP_002300877.1| prolyl-tRNA synthetase [Helicobacter pylori P12]
 gi|226701295|sp|B6JKG9|SYP_HELP2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|210132406|gb|ACJ07397.1| prolyl-tRNA synthetase [Helicobacter pylori P12]
          Length = 577

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 42/180 (23%), Positives = 77/180 (42%), Gaps = 11/180 (6%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           + H+ LA+   ++ +   GSG+  +     K+   + +   +++++   + I    V+  
Sbjct: 21  KSHKHLAQAGYIYQV---GSGIYNFLPLAKKVLDKIENITHKRMQEHGAQNILMSFVVLA 77

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SG  D Y   +   K   D       F L P        +  + +KSY++LPV L
Sbjct: 78  SLWEKSGRLDKYGKELLVFKDRKDN-----DFVLSPTLEENITEIAANFIKSYKQLPVHL 132

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT-KEQMFNECLKIHNLIISIYKDFGFE 421
            +  + +R+E      GL+R R F   D + F    E +  E L   +    I  D G +
Sbjct: 133 YQIHTKFRDEIRPRF-GLVRAREFIMKDGYSFHEDAESLDKEFLNTQSAYKEILSDLGLD 191


>gi|254717705|ref|ZP_05179516.1| alanyl-tRNA synthetase [Brucella ceti M13/05/1]
          Length = 768

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 12/128 (9%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++ EA++          G ++  D   +DF   +P S++EL  +E    EII ++
Sbjct: 447 HSATHLLHEALRETLGTHVAQKGSLVAPDRLRFDFSHPKPISAEELEAVENLANEIILQN 506

Query: 134 SPFLKQYLS-----HEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF--DLCRGP 186
           +P   + ++      E A  LF  +K   +V ++    AK      + G+ +  +LC G 
Sbjct: 507 APVTTRLMAVDDAIAEGAMALF-GEKYGDEVRVVSMGTAKHG---SKAGKAYSVELCGGT 562

Query: 187 HVRSTGQV 194
           HVR TG +
Sbjct: 563 HVRQTGDI 570


>gi|27365189|ref|NP_760717.1| prolyl-tRNA synthetase [Vibrio vulnificus CMCP6]
 gi|81844691|sp|Q8DBH9|SYP_VIBVU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|27361336|gb|AAO10244.1| prolyl-tRNA synthetase [Vibrio vulnificus CMCP6]
          Length = 571

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 65/134 (48%), Gaps = 9/134 (6%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINT--PQVLDQHLWQQSGHWDSYRANMFA 320
           SG+  W   G ++ + + + +R++I D+   I T  P V    LW+++G     R+    
Sbjct: 37  SGLYTWLPTGLRVLRKVENIVRQEI-DNAGAIETLMPVVQPFELWEETG-----RSEKMG 90

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +    T + +R F L P       A+  + + SY++LP+ L +  + +R+E      G+
Sbjct: 91  PELLRFTDRHVRPFVLSPTAEEVITALVRNEVSSYKQLPINLYQIQTKFRDERRPRF-GV 149

Query: 381 MRVRGFTQDDAHVF 394
           MR R F   DA+ F
Sbjct: 150 MRAREFCMMDAYSF 163


>gi|327293800|ref|XP_003231596.1| prolyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
 gi|326466224|gb|EGD91677.1| prolyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
          Length = 631

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 4/85 (4%)

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
           F L P +     +V +  +KSYR+LP+R+ +    YR+EP    HGL+R R F   D + 
Sbjct: 143 FLLAPTHEEEITSVVSGLIKSYRDLPLRVYQISRKYRDEPR-PRHGLLRGREFVMKDLYT 201

Query: 394 FCTKEQMFNECLKIHNLIISIYKDF 418
           F + E    E +K +N +   Y   
Sbjct: 202 FDSTEA---EAIKTYNTVKEAYSSL 223


>gi|320155572|ref|YP_004187951.1| prolyl-tRNA synthetase [Vibrio vulnificus MO6-24/O]
 gi|319930884|gb|ADV85748.1| prolyl-tRNA synthetase [Vibrio vulnificus MO6-24/O]
          Length = 571

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 65/134 (48%), Gaps = 9/134 (6%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINT--PQVLDQHLWQQSGHWDSYRANMFA 320
           SG+  W   G ++ + + + +R++I D+   I T  P V    LW+++G     R+    
Sbjct: 37  SGLYTWLPTGLRVLRKVENIVRQEI-DNAGAIETLMPVVQPFELWEETG-----RSEKMG 90

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +    T + +R F L P       A+  + + SY++LP+ L +  + +R+E      G+
Sbjct: 91  PELLRFTDRHVRPFVLSPTAEEVITALVRNEVSSYKQLPINLYQIQTKFRDERRPRF-GV 149

Query: 381 MRVRGFTQDDAHVF 394
           MR R F   DA+ F
Sbjct: 150 MRAREFCMMDAYSF 163


>gi|195504997|ref|XP_002099319.1| GE10841 [Drosophila yakuba]
 gi|194185420|gb|EDW99031.1| GE10841 [Drosophila yakuba]
          Length = 996

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 70/311 (22%), Positives = 118/311 (37%), Gaps = 64/311 (20%)

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYR---NEPSGSLHGLMRVRGFTQDD 390
            A++P +       +   ++SYR+LP+RL ++ +V R    +P+      +R R F   +
Sbjct: 599 IAVRPTSETVMYPAYAKWVQSYRDLPIRLNQWNNVVRWEFKQPT----PFLRTREFLWQE 654

Query: 391 AHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMK 449
            H  F  KE+   E L I +L   +Y       ++    T  EK  G D           
Sbjct: 655 GHTAFADKEEAAKEVLDILDLYALVYTHLLAIPVVKGRKTEKEKFAGGD----------- 703

Query: 450 GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNA 508
                                    Y    E  +  A GR  Q  T   +  N    F  
Sbjct: 704 -------------------------YTTTVEAFI-SASGRAIQGATSHHLGQNFSKMFEI 737

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVT----TI 560
            Y +  +++     +++  +G   R IG+MI     N  L L P    IQAIV     T+
Sbjct: 738 VYEDPETQQKK--YVYQNSWGLTTRTIGVMIMVHADNQGLVLPPHVACIQAIVVPCGITV 795

Query: 561 TSSAVEYAQ------EIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKE 613
            +   E AQ       +   L    +  E D+R N +  +K     +K +P+ +  G K+
Sbjct: 796 NTKDDERAQLLDACKALEKRLVGGGVRCEGDYRDNYSPGWKFNHWELKGVPLRLEVGPKD 855

Query: 614 -ASERSIGIRR 623
             +++ + +RR
Sbjct: 856 LKAQQLVAVRR 866


>gi|33519754|ref|NP_878586.1| prolyl-tRNA synthetase [Candidatus Blochmannia floridanus]
 gi|81836111|sp|Q7VRC8|SYP_BLOFL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|33504099|emb|CAD83360.1| prolyl-tRNA synthetase [Candidatus Blochmannia floridanus]
          Length = 581

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 31/138 (22%), Positives = 63/138 (45%), Gaps = 7/138 (5%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           + +  SGV  W   G ++ + + + +  ++ K  + EI  P     +LW+QSG W  Y  
Sbjct: 32  VRQISSGVYTWLPTGLRVLKKIENIIHEEMNKIGFLEIFMPITQPANLWKQSGRWSEYGL 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            +   K   +     + F L P +      +  + + S+++ P++L +  + YR+E    
Sbjct: 92  ELLRFKNRTN-----QKFVLGPTHEEMITDLVCNEILSHKQFPIKLYQINTKYRDEARPQ 146

Query: 377 LHGLMRVRGFTQDDAHVF 394
             G++R + F   D + F
Sbjct: 147 F-GVIRSKEFIMKDGYSF 163


>gi|294790672|ref|ZP_06755830.1| proline--tRNA ligase [Scardovia inopinata F0304]
 gi|294458569|gb|EFG26922.1| proline--tRNA ligase [Scardovia inopinata F0304]
          Length = 598

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 40/155 (25%), Positives = 70/155 (45%), Gaps = 19/155 (12%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
           +I + G G+  W   G ++   + + +R +I     +E++ P ++ +  +Q S  W+ Y 
Sbjct: 36  YIRKIGPGLYSWLPLGLRVLNKIEAIIREEINAIGAQEVHFPAMMPREPYQMSNRWEEYG 95

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----SYRELPVRLAEFGSVYRN 371
            N+F  K  D    D        +  P H  +F   +K    SY++LPV L +    YR+
Sbjct: 96  DNIFRFK--DRHGADY-------LLAPTHEEMFTLMVKDMYTSYKDLPVTLYQIQGKYRD 146

Query: 372 E--PSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           E  P     G++R R F   DA+ F   E+   + 
Sbjct: 147 EFRPRA---GMIRGRQFVMKDAYSFDIDEEGLKKA 178


>gi|257065041|ref|YP_003144713.1| prolyl-tRNA synthetase, family II [Slackia heliotrinireducens DSM
           20476]
 gi|256792694|gb|ACV23364.1| prolyl-tRNA synthetase, family II [Slackia heliotrinireducens DSM
           20476]
          Length = 570

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 63/138 (45%), Gaps = 7/138 (5%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I ++ +G+  +   G ++ + + + +R ++     EE+  P V    LW+QSG W +Y  
Sbjct: 41  IRKEAAGLYSFLPLGLRVLRKIENIVREEMDSHGGEELLMPFVQSADLWRQSGRWGAYGE 100

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  ++   D       F L P        +  + L+SY++LP  L      +R+E    
Sbjct: 101 EMMTMRDRHDN-----EFCLGPTAEEVITDLVKNELRSYKDLPKNLYHIQLKFRDERRPR 155

Query: 377 LHGLMRVRGFTQDDAHVF 394
             GL+R R F   DA+ F
Sbjct: 156 F-GLLRSREFIMKDAYSF 172


>gi|25012603|gb|AAN71400.1| RE41560p [Drosophila melanogaster]
          Length = 998

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 72/322 (22%), Positives = 124/322 (38%), Gaps = 67/322 (20%)

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYR---NEPSGSLHGLMRVRGFTQDD 390
            A++P +       +   ++SYR+LP+RL ++ +V R    +P+      +R R F   +
Sbjct: 601 IAVRPTSETVMYPAYAKWVQSYRDLPIRLNQWNNVVRWEFKQPT----PFLRTREFLWQE 656

Query: 391 AHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMK 449
            H  F  KE+   E L I +L   +Y       ++    T  EK  G D           
Sbjct: 657 GHTAFADKEEAAKEVLDILDLYALVYTHLLAIPVVKGRKTEKEKFAGGD----------- 705

Query: 450 GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNA 508
                                    Y    E  +  A GR  Q  T   +  N    F  
Sbjct: 706 -------------------------YTTTVEAFI-SASGRAIQGATSHHLGQNFSKMFEI 739

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVT----TI 560
            Y +  +++     +++  +G   R IG+MI     N  L L P    IQAIV     T+
Sbjct: 740 VYEDPETQQKK--YVYQNSWGITTRTIGVMIMVHADNQGLVLPPHVACIQAIVVPCGITV 797

Query: 561 TSSAVEYAQ------EIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKE 613
            +   E AQ       +   L    +  E D+R N +  +K     +K +P+ +  G K+
Sbjct: 798 NTKDDERAQLLDACKALEKRLVGGGVRCEGDYRDNYSPGWKFNHWELKGVPLRLEVGPKD 857

Query: 614 -ASERSIGIRRFGSTTTQKVSL 634
             +++ + +RR    T +K+++
Sbjct: 858 LKAQQLVAVRR---DTVEKITI 876


>gi|24649468|ref|NP_732925.1| Glutamyl-prolyl-tRNA synthetase, isoform B [Drosophila
           melanogaster]
 gi|23172101|gb|AAN13964.1| Glutamyl-prolyl-tRNA synthetase, isoform B [Drosophila
           melanogaster]
          Length = 996

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 72/322 (22%), Positives = 124/322 (38%), Gaps = 67/322 (20%)

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYR---NEPSGSLHGLMRVRGFTQDD 390
            A++P +       +   ++SYR+LP+RL ++ +V R    +P+      +R R F   +
Sbjct: 599 IAVRPTSETVMYPAYAKWVQSYRDLPIRLNQWNNVVRWEFKQPT----PFLRTREFLWQE 654

Query: 391 AHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMK 449
            H  F  KE+   E L I +L   +Y       ++    T  EK  G D           
Sbjct: 655 GHTAFADKEEAAKEVLDILDLYALVYTHLLAIPVVKGRKTEKEKFAGGD----------- 703

Query: 450 GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNA 508
                                    Y    E  +  A GR  Q  T   +  N    F  
Sbjct: 704 -------------------------YTTTVEAFI-SASGRAIQGATSHHLGQNFSKMFEI 737

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVT----TI 560
            Y +  +++     +++  +G   R IG+MI     N  L L P    IQAIV     T+
Sbjct: 738 VYEDPETQQKK--YVYQNSWGITTRTIGVMIMVHADNQGLVLPPHVACIQAIVVPCGITV 795

Query: 561 TSSAVEYAQ------EIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKE 613
            +   E AQ       +   L    +  E D+R N +  +K     +K +P+ +  G K+
Sbjct: 796 NTKDDERAQLLDACKALEKRLVGGGVRCEGDYRDNYSPGWKFNHWELKGVPLRLEVGPKD 855

Query: 614 -ASERSIGIRRFGSTTTQKVSL 634
             +++ + +RR    T +K+++
Sbjct: 856 LKAQQLVAVRR---DTVEKITI 874


>gi|124515073|gb|EAY56584.1| Prolyl-tRNA synthetase [Leptospirillum rubarum]
          Length = 422

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 42/189 (22%), Positives = 83/189 (43%), Gaps = 11/189 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E   HR + R   +  +A    GV  +     +  + + S +R ++     +E+  P 
Sbjct: 17  EAEVVSHRLMLRAGFVRKLA---GGVYSYLPMAVRALRKVESIIREEMNSAGGQEVLLPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW+++G W +Y   +F +    +     R FAL P +      + +  ++SYR+L
Sbjct: 74  LQPSDLWEKTGRWQAYGPELFRLHDRHE-----RAFALGPTHEEVITDLVSQIIRSYRQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKD 417
           P    +  + +R+E      G++R R F   DA+ F   E+   +   ++      I+  
Sbjct: 129 PFLAYQIQTKFRDERRPRF-GILRGREFIMKDAYSFSASEENARQIYARMQEAYGRIFLR 187

Query: 418 FGFEKIMVK 426
            G +  MV+
Sbjct: 188 LGLDHRMVE 196


>gi|256396855|ref|YP_003118419.1| prolyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
 gi|256363081|gb|ACU76578.1| prolyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
          Length = 582

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 43/194 (22%), Positives = 87/194 (44%), Gaps = 16/194 (8%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E   H+ L R   +  +A    G+  W   G ++ + +   +R ++ +   +E+  P 
Sbjct: 19  DAEVPSHKLLVRGGYVRRVA---PGIYSWLPLGKQVLENVTRVVREEMDRMGGQEVQFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT--FALKPMNCPGHVAVFNHGLKSYR 356
           +L +  ++ +G W  Y  N+F        ++D R   + L P +      +    + SY+
Sbjct: 76  LLPREYYEATGRWTEYGDNLF-------RLQDRRGNDYLLGPTHEEMFTDMVKSEVSSYK 128

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH-NLIISIY 415
           +LPV L +  + YR+E +    G++R R F   D++ F   +         H +  I I+
Sbjct: 129 DLPVTLYQIQTKYRDE-ARPRAGILRGREFLMKDSYSFDLDDDGLKHSYAEHRDTYIRIF 187

Query: 416 KDFGFE-KIMVKLS 428
              G + KI+  +S
Sbjct: 188 DRLGIKYKIVSAVS 201


>gi|285019440|ref|YP_003377151.1| prolyl-tRNA synthetase [Xanthomonas albilineans GPE PC73]
 gi|283474658|emb|CBA17157.1| probable prolyl-trna synthetase protein [Xanthomonas albilineans]
          Length = 564

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 38/156 (24%), Positives = 69/156 (44%), Gaps = 10/156 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E   HR + R   +  +A   SG+  W   G ++ + + + +R ++ +    E+  P 
Sbjct: 17  DAELVSHRLMLRAGMIRKLA---SGLYTWSPLGLRVLRKVETVVREEMNRAGALEVVFPT 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +  + LW  +G W  +   M  ++  D   +D   +   P           H L SY++L
Sbjct: 74  IQPRELWDATGRWKKFGDLMLRIR--DRKEQD---YCYSPTAEEAAADFARHELNSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           PV   +  S +R+E      G+MR R F   DA+ F
Sbjct: 129 PVNFYQIQSKFRDEIRPRF-GVMRAREFLMKDAYSF 163


>gi|31560438|ref|NP_059100.2| 39S ribosomal protein L39, mitochondrial [Mus musculus]
 gi|12841380|dbj|BAB25185.1| unnamed protein product [Mus musculus]
 gi|15126697|gb|AAH12274.1| Mitochondrial ribosomal protein L39 [Mus musculus]
 gi|26327739|dbj|BAC27613.1| unnamed protein product [Mus musculus]
          Length = 297

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 57/245 (23%), Positives = 106/245 (43%), Gaps = 30/245 (12%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIR---HS 76
           +T    A  +S     K++   ++G+  D+  P+ +   I+ +T +DP    V +    S
Sbjct: 44  STPYSCAMHLSEWYCSKSILALVDGQPWDMYKPLTKSCEIKFLTFKDPDPKEVNKAYWRS 103

Query: 77  CAHIMAEAVQSIWPE------VQVAIGPIIEDGFYYD------FDKEQPFSSDELAQIEK 124
           CA ++   ++  + +      V+    P+I   F YD       D+  P + + L    K
Sbjct: 104 CAMMLGCVIERAFKDDYVVSLVRAPEVPVIAGAFCYDVTLDKRLDEWMP-TKENLRSFTK 162

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN----VTLYRQGEWF 180
               +I RD PF    +    A E+F+  K  YKV+ +E   A +N    V L+R G++ 
Sbjct: 163 DAHALIYRDLPFETLDVDARVALEIFQHNK--YKVDFIEE-KASQNPERIVKLHRIGDFI 219

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNT--QQELTQYLYFL 238
           D+  GP +  T    ++    +V+  +    S   ++ R  G +  T  + + T +   +
Sbjct: 220 DVSEGPLIPRTSVCFQY----EVSAVHNLNPSQPNLIRRFQGLSLPTHLRAQFTIWDKLV 275

Query: 239 EESEK 243
           E S K
Sbjct: 276 ERSRK 280


>gi|319941405|ref|ZP_08015733.1| alanyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
 gi|319805025|gb|EFW01855.1| alanyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
          Length = 875

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 45/186 (24%), Positives = 88/186 (47%), Gaps = 20/186 (10%)

Query: 27  AESISRSLAKKAVAVAINGKVCDLSDPVREGSIEI-----ITPEDPRSLAVIR-HSCAHI 80
           A +I + L    V  A+ G  C     V EG + +     +  ++ R  A  R HS  H+
Sbjct: 514 ATAILKVLDTFRVKAAVTGLQCH----VAEGHVAVGDKFDLAVDEARREATARNHSVTHL 569

Query: 81  MAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQ 139
           M  A++++  +     G ++  +   +DF   +P +++++A++E+ +   I +++P   +
Sbjct: 570 MHFALRTVLGDKVAQKGSLVTPESTRFDFSYGKPVTAEQIAEVERIVNAQILKNTPVQTR 629

Query: 140 YLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFK 199
            L  E      E+KK    +   E     E V +   G+  + C G HV++TG +  FFK
Sbjct: 630 VLPIE------EAKKTGAVMLFGERY--GEVVRVLDIGKSTEFCGGTHVKATGDI-GFFK 680

Query: 200 LMKVAG 205
           ++  +G
Sbjct: 681 VVSESG 686


>gi|237756770|ref|ZP_04585264.1| prolyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense SS-5]
 gi|237691073|gb|EEP60187.1| prolyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense SS-5]
          Length = 162

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 30/131 (22%), Positives = 63/131 (48%), Gaps = 7/131 (5%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           +G+  +   G ++ + + + +R+ + D    E+  P +    LW+++G W  Y   +F +
Sbjct: 37  AGIYEYLPLGLRVLRKIENIIRKHMDDSGALEVLLPILTPAELWKETGRWYVYGKELFRL 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           K   D       FAL P +      +    ++SY++LP+   +  + +R+E +   +GL+
Sbjct: 97  KDRKDA-----EFALGPTHEETITDLVRKNVRSYKDLPLNFYQIQTKFRDE-ARPRYGLI 150

Query: 382 RVRGFTQDDAH 392
           R R F   D +
Sbjct: 151 RGREFIMKDGY 161


>gi|7271935|gb|AAF44697.1|AF239728_1 unknown [Mus musculus]
          Length = 297

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 85/192 (44%), Gaps = 24/192 (12%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIR---HS 76
           +T    A  +S     K++   ++G+  D+  P+ +   I+ +T +DP    V +    S
Sbjct: 44  STPYSCAMHLSEWYCSKSILALVDGQPWDMYKPLTKSCEIKFLTFKDPDPKEVNKAYWRS 103

Query: 77  CAHIMAEAVQSIWPE------VQVAIGPIIEDGFYYD------FDKEQPFSSDELAQIEK 124
           CA ++   ++  + +      V+    P+I   F YD       D+  P + + L    K
Sbjct: 104 CAMMLGCVIERAFKDDYVVSLVRAPEVPVIAGAFCYDVTLDKRLDEWMP-TKENLRSFTK 162

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN----VTLYRQGEWF 180
               +I RD PF    +    A E+F+  K  YKV+ +E   A +N    V L+R G++ 
Sbjct: 163 DAHALIYRDLPFETLDVDARVALEIFQHNK--YKVDFIEE-KASQNPERIVKLHRIGDFI 219

Query: 181 DLCRGPHVRSTG 192
           D+  GP +  T 
Sbjct: 220 DVSEGPLIPRTS 231


>gi|24649466|ref|NP_524471.2| Glutamyl-prolyl-tRNA synthetase, isoform A [Drosophila melanogaster]
 gi|44888996|sp|P28668|SYEP_DROME RecName: Full=Bifunctional aminoacyl-tRNA synthetase; Includes:
            RecName: Full=Glutamyl-tRNA synthetase; AltName:
            Full=Glutamate--tRNA ligase; Short=GluRS; Includes:
            RecName: Full=Prolyl-tRNA synthetase; AltName:
            Full=Proline--tRNA ligase; Short=ProRS
 gi|7301076|gb|AAF56211.1| Glutamyl-prolyl-tRNA synthetase, isoform A [Drosophila melanogaster]
 gi|16198227|gb|AAL13932.1| LD42739p [Drosophila melanogaster]
          Length = 1714

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 72/322 (22%), Positives = 124/322 (38%), Gaps = 67/322 (20%)

Query: 334  FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYR---NEPSGSLHGLMRVRGFTQDD 390
             A++P +       +   ++SYR+LP+RL ++ +V R    +P+      +R R F   +
Sbjct: 1317 IAVRPTSETVMYPAYAKWVQSYRDLPIRLNQWNNVVRWEFKQPT----PFLRTREFLWQE 1372

Query: 391  AHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMK 449
             H  F  KE+   E L I +L   +Y       ++    T  EK  G D           
Sbjct: 1373 GHTAFADKEEAAKEVLDILDLYALVYTHLLAIPVVKGRKTEKEKFAGGD----------- 1421

Query: 450  GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNA 508
                                     Y    E  +  A GR  Q  T   +  N    F  
Sbjct: 1422 -------------------------YTTTVEAFI-SASGRAIQGATSHHLGQNFSKMFEI 1455

Query: 509  FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVT----TI 560
             Y +  +++     +++  +G   R IG+MI     N  L L P    IQAIV     T+
Sbjct: 1456 VYEDPETQQKK--YVYQNSWGITTRTIGVMIMVHADNQGLVLPPHVACIQAIVVPCGITV 1513

Query: 561  TSSAVEYAQ------EIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKE 613
             +   E AQ       +   L    +  E D+R N +  +K     +K +P+ +  G K+
Sbjct: 1514 NTKDDERAQLLDACKALEKRLVGGGVRCEGDYRDNYSPGWKFNHWELKGVPLRLEVGPKD 1573

Query: 614  -ASERSIGIRRFGSTTTQKVSL 634
              +++ + +RR    T +K+++
Sbjct: 1574 LKAQQLVAVRR---DTVEKITI 1592


>gi|154502787|ref|ZP_02039847.1| hypothetical protein RUMGNA_00601 [Ruminococcus gnavus ATCC 29149]
 gi|153796670|gb|EDN79090.1| hypothetical protein RUMGNA_00601 [Ruminococcus gnavus ATCC 29149]
          Length = 556

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 44/177 (24%), Positives = 75/177 (42%), Gaps = 6/177 (3%)

Query: 26  VAESISRSLAKKAVAVAING-KVCDLSDPVREG-SIEIITPEDPRSLAVIRHSCAHIMAE 83
           +AE        K V   ++G ++ +L+  +++   IE +T +DP      R S   ++ +
Sbjct: 26  IAEEFQEEYPAKIVLALVDGTRLQELNKRLKQDCKIEFVTVKDPIGYETYRRSLCFMLVK 85

Query: 84  AVQSIWPEVQ---VAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQY 140
           AV  +    +   V I   + +G+Y   D +       L QI+ +M E+     P  K+ 
Sbjct: 86  AVHDVGGHDKIRNVKIHFSVSNGYYCTIDGDVVLDQKFLDQIDARMHELAEAQIPIEKRS 145

Query: 141 LSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
           +    A ELF  +   Y  E L        V +YR  E+ D   G  V  +G +K F
Sbjct: 146 VHTSDAVELF-GRHGMYDKERLFGYRRVSKVNIYRMNEFEDYYYGYMVPDSGYLKNF 201


>gi|148979813|ref|ZP_01815720.1| prolyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
 gi|145961607|gb|EDK26907.1| prolyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
          Length = 572

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 39/162 (24%), Positives = 75/162 (46%), Gaps = 10/162 (6%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINT--PQVLDQHLWQQSGHWDSYRANMFA 320
           SG+  W   G ++ + + + +R++I D+   + T  P V    LW+++G     R+    
Sbjct: 37  SGLYTWLPTGLRVLRKVENIVRQEI-DNAGAVETLMPVVQPFELWEETG-----RSEKMG 90

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +    T +  R F L P       ++  + + SY++LP+ L +  + +R+E      G+
Sbjct: 91  PELLRFTDRHSRPFVLSPTAEEVITSLVRNEVNSYKQLPLNLYQIQTKFRDERRPRF-GV 149

Query: 381 MRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFE 421
           MR R F+  DA+ F   KE +      +H+   + +   G E
Sbjct: 150 MRAREFSMMDAYSFDIDKEGLEKSYQAMHDAYCNAFDRMGLE 191


>gi|312109703|ref|YP_003988019.1| threonyl/alanyl tRNA synthetase SAD [Geobacillus sp. Y4.1MC1]
 gi|311214804|gb|ADP73408.1| Threonyl/alanyl tRNA synthetase SAD [Geobacillus sp. Y4.1MC1]
          Length = 256

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 80/159 (50%), Gaps = 11/159 (6%)

Query: 44  NGKVCDLSDPV---REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIG-PI 99
           NG++    D +   ++G +EI+   D R   +  HS  H++A  + + +    +AIG  I
Sbjct: 64  NGQIVHYVDNIEKLKQGPVEILIDWDRRYKFMRYHSLLHVLAGYLYNKFG--ALAIGNQI 121

Query: 100 IEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKV 159
            ED    DF  E+P ++++  +IE ++ ++I  D     + +S E+A  +  S K    +
Sbjct: 122 FEDRARIDFQFEEPLTNEQFNEIEDEINKLIQEDHQVSIRTVSREEAERIDGSIKTV--I 179

Query: 160 EILESIPAKENVTLYRQGEWFD-LCRGPHVRSTGQVKKF 197
            +L   P+ +NV L   G+  +  C G HV+ T ++  F
Sbjct: 180 NLLP--PSIKNVRLVAIGDIDEQACGGTHVKETKEIGPF 216


>gi|308182413|ref|YP_003926540.1| prolyl-tRNA synthetase [Helicobacter pylori PeCan4]
 gi|308064598|gb|ADO06490.1| prolyl-tRNA synthetase [Helicobacter pylori PeCan4]
          Length = 577

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 42/180 (23%), Positives = 77/180 (42%), Gaps = 11/180 (6%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           + H+ LA+   ++ +   GSG+  +     K+   + +   +++++   + I    V+  
Sbjct: 21  KSHKHLAQAGYIYQV---GSGIYNFLPLAKKVLDKIENITHKRMQEHGAQNILMSFVVLA 77

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SG  D Y   +   K   D       F L P        +  + +KSY++LPV L
Sbjct: 78  SLWEKSGRLDKYGKELLVFKDRKDN-----DFVLSPTLEENITEIAANFIKSYKQLPVHL 132

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT-KEQMFNECLKIHNLIISIYKDFGFE 421
            +  + +R+E      GL+R R F   D + F    E +  E L   +    I  D G +
Sbjct: 133 YQIHTKFRDEIRPRF-GLVRAREFIMKDGYSFHEDAESLDKEFLNTQSAYKEILSDLGLD 191


>gi|208434185|ref|YP_002265851.1| prolyl-tRNA synthetase [Helicobacter pylori G27]
 gi|226701296|sp|B5ZA05|SYP_HELPG RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|208432114|gb|ACI26985.1| prolyl-tRNA synthetase [Helicobacter pylori G27]
          Length = 577

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 42/180 (23%), Positives = 77/180 (42%), Gaps = 11/180 (6%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           + H+ LA+   ++ +   GSG+  +     K+   + +   +++++   + I    V+  
Sbjct: 21  KSHKHLAQAGYIYQV---GSGIYNFLPLAKKVLDKIENITHKRMQEHGAQNILMSFVVLA 77

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SG  D Y   +   K   D       F L P        +  + +KSY++LPV L
Sbjct: 78  SLWEKSGRLDKYGKELLVFKDRKDN-----DFVLSPTLEENITEIAANFIKSYKQLPVHL 132

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT-KEQMFNECLKIHNLIISIYKDFGFE 421
            +  + +R+E      GL+R R F   D + F    E +  E L   +    I  D G +
Sbjct: 133 YQIHTKFRDEIRPRF-GLVRAREFIMKDGYSFHEDAESLDKEFLNTQSAYKEILSDLGLD 191


>gi|325120098|emb|CBZ55652.1| putative prolyl-tRNA synthetase [Neospora caninum Liverpool]
          Length = 656

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 67/324 (20%), Positives = 133/324 (41%), Gaps = 60/324 (18%)

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYR---NEPSGSLHGLMRVRGFTQDD 390
            A++P +       ++  ++S+R+LP++L ++ SV R    +P+      +R R F   +
Sbjct: 260 IAIRPTSETIMYPAYSKWIRSHRDLPLKLNQWCSVVRWEFKQPTP----FLRTREFLWQE 315

Query: 391 AHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMK 449
            H    T+E+ +   L I    + +Y+ + +E+ +     + EK         + E    
Sbjct: 316 GHTAHATEEEAWQLVLDI----LELYRRW-YEECLAVPVIKGEK--------SENEKFAG 362

Query: 450 GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF-NA 508
           G   T   +                      YI ++  GR  Q  T  +   L + F   
Sbjct: 363 GKKTTTVEA----------------------YIAEN--GRGIQAATSHL---LGTNFAKM 395

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTI---- 560
           F +    E+ H  ++H+  +G   R +G+MI     +    LP  ++ +Q I+  I    
Sbjct: 396 FEIEFEDEEGHKRLVHQTSWGCTTRSLGVMIMTHGDDKGIVLPPRVASVQVIIIPILFKD 455

Query: 561 --TSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASER 617
             T+  V   +E+  LL+   + +  D R N T  +K     +K +P+ +  G K+ ++ 
Sbjct: 456 ENTAEIVAKCRELKALLEKADIRVRIDDRPNYTPGWKYNHWEVKGVPLRLELGPKDLAKG 515

Query: 618 SIGIRRFGSTTTQKVSLLDAIPIL 641
           S  + R  +    +V   + +P L
Sbjct: 516 SARVVRRDTNEAYQVQWDELVPKL 539


>gi|297202727|ref|ZP_06920124.1| prolyl-tRNA synthetase [Streptomyces sviceus ATCC 29083]
 gi|197713306|gb|EDY57340.1| prolyl-tRNA synthetase [Streptomyces sviceus ATCC 29083]
          Length = 567

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 40/174 (22%), Positives = 77/174 (44%), Gaps = 18/174 (10%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R     ++    +G+  W   G K+   +   +R ++     +E+  P 
Sbjct: 23  DAEVLSHKLLVRA---GYVRRTAAGIWSWLPLGKKVLANVERIVREEMDAIGAQEVLLPA 79

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L +  ++ +G WD Y   +F  +  D    D        +  P H  +F   +K    S
Sbjct: 80  ILPREPYEATGRWDEYGPELF--RLQDRKGGDY-------LLGPTHEEIFTLLVKDQASS 130

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
           Y++LPV L +    YR+E +    G++R R F   D++ F T+++       +H
Sbjct: 131 YKDLPVILYQIQHKYRDE-ARPRAGILRGREFLMKDSYSFDTEDEGLARSYALH 183


>gi|15644866|ref|NP_207036.1| prolyl-tRNA synthetase [Helicobacter pylori 26695]
 gi|2501038|sp|P56124|SYP_HELPY RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|2313329|gb|AAD07305.1| prolyl-tRNA synthetase (proS) [Helicobacter pylori 26695]
          Length = 577

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 42/180 (23%), Positives = 77/180 (42%), Gaps = 11/180 (6%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           + H+ LA+   ++ +   GSG+  +     K+   + +   +++++   + I    V+  
Sbjct: 21  KSHKHLAQAGYIYQV---GSGIYNFLPLAKKVLDKIENITHKRMQEHGAQNILMSFVVLA 77

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SG  D Y   +   K   D       F L P        +  + +KSY++LPV L
Sbjct: 78  SLWEKSGRLDKYGKELLVFKDRKDN-----DFVLSPTLEENITEIAANFIKSYKQLPVHL 132

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT-KEQMFNECLKIHNLIISIYKDFGFE 421
            +  + +R+E      GL+R R F   D + F    E +  E L   +    I  D G +
Sbjct: 133 YQIHTKFRDEIRPRF-GLVRAREFIMKDGYSFHEDAESLDKEFLNTQSAYKEILSDLGLD 191


>gi|197334450|ref|YP_002155444.1| prolyl-tRNA synthetase [Vibrio fischeri MJ11]
 gi|226701355|sp|B5FBD6|SYP_VIBFM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|197315940|gb|ACH65387.1| prolyl-tRNA synthetase [Vibrio fischeri MJ11]
          Length = 571

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 40/163 (24%), Positives = 74/163 (45%), Gaps = 10/163 (6%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINT--PQVLDQHLWQQSGHWDSYRANMF 319
            SG+  W   G ++ + + + +R++I D+   I T  P V    LW+++G     R+   
Sbjct: 36  ASGLYTWLPTGLRVLRKVENIVRQEI-DNAGAIETLMPVVQPFELWEETG-----RSEKM 89

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHG 379
             +    T + +R F L P       ++  + + SY++LP+ L +  + +R+E      G
Sbjct: 90  GPELLRFTDRHVRPFVLSPTAEEVITSLVRNEVSSYKQLPLNLYQIQTKFRDERRPRF-G 148

Query: 380 LMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFE 421
           +MR R F   DA+ F   KE +      +H+     +   G E
Sbjct: 149 VMRAREFCMMDAYSFDIDKEGLQKSYDAMHDAYCKAFDRMGLE 191


>gi|332673080|gb|AEE69897.1| proline--tRNA ligase [Helicobacter pylori 83]
          Length = 577

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 42/180 (23%), Positives = 77/180 (42%), Gaps = 11/180 (6%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           + H+ LA+   ++ +   GSG+  +     K+   + +   +++++   + I    V+  
Sbjct: 21  KSHKHLAQAGYIYQV---GSGIYNFLPLAKKVLDKIENITHKRMQEHGAQNILMSFVVLA 77

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SG  D Y   +   K   D       F L P        +  + +KSY++LPV L
Sbjct: 78  SLWEKSGRLDKYGKELLVFKDRKDN-----DFVLSPTLEENITEIAANFIKSYKQLPVHL 132

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT-KEQMFNECLKIHNLIISIYKDFGFE 421
            +  + +R+E      GL+R R F   D + F    E +  E L   +    I  D G +
Sbjct: 133 YQIHTKFRDEIRPRF-GLVRAREFIMKDGYSFHEDAESLDKEFLNTQSAYKEILSDLGLD 191


>gi|206603805|gb|EDZ40285.1| Prolyl-tRNA synthetase [Leptospirillum sp. Group II '5-way CG']
          Length = 422

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 32/136 (23%), Positives = 62/136 (45%), Gaps = 7/136 (5%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           +E+  P +    LW+++G W +Y   +F +    +     R FAL P +      + +  
Sbjct: 67  QEVLLPALQPSDLWEKTGRWQAYGPELFRLHDRHE-----RAFALGPTHEEVITDLVSQV 121

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNL 410
           ++SYR+LP    +  + +R+E      G++R R F   DA+ F   E+   +   ++   
Sbjct: 122 IRSYRQLPFIAYQIQTKFRDERRPRF-GILRGREFIMKDAYSFSVSEENARQIYTRMQEA 180

Query: 411 IISIYKDFGFEKIMVK 426
              I+   G +  MV+
Sbjct: 181 YGRIFLRLGLDHRMVE 196


>gi|317180044|dbj|BAJ57830.1| prolyl-tRNA synthetase [Helicobacter pylori F32]
          Length = 577

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 42/180 (23%), Positives = 77/180 (42%), Gaps = 11/180 (6%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           + H+ LA+   ++ +   GSG+  +     K+   + +   +++++   + I    V+  
Sbjct: 21  KSHKHLAQAGYIYQV---GSGIYNFLPLAKKVLDKIENITHKRMQEHGAQNILMSFVVLA 77

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SG  D Y   +   K   D       F L P        +  + +KSY++LPV L
Sbjct: 78  SLWEKSGRLDKYGKELLVFKDRKDN-----DFVLSPTLEENITEIAANFIKSYKQLPVHL 132

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT-KEQMFNECLKIHNLIISIYKDFGFE 421
            +  + +R+E      GL+R R F   D + F    E +  E L   +    I  D G +
Sbjct: 133 YQIHTKFRDEIRPRF-GLVRAREFIMKDGYSFHEDAESLDKEFLNTQSAYKEILSDLGLD 191


>gi|254778944|ref|YP_003057049.1| prolyl-tRNA synthetase [Helicobacter pylori B38]
 gi|254000855|emb|CAX28787.1| Prolyl-tRNA synthetase (Proline--tRNA ligase) (ProRS) (Global RNA
           synthesis factor) [Helicobacter pylori B38]
          Length = 577

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 42/180 (23%), Positives = 77/180 (42%), Gaps = 11/180 (6%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           + H+ LA+   ++ +   GSG+  +     K+   + +   +++++   + I    V+  
Sbjct: 21  KSHKHLAQAGYIYQV---GSGIYNFLPLAKKVLDKIENITHKRMQEHGAQNILMSFVVLA 77

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SG  D Y   +   K   D       F L P        +  + +KSY++LPV L
Sbjct: 78  SLWEKSGRLDKYGKELLVFKDRKDN-----DFVLSPTLEENITEIAANFIKSYKQLPVHL 132

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT-KEQMFNECLKIHNLIISIYKDFGFE 421
            +  + +R+E      GL+R R F   D + F    E +  E L   +    I  D G +
Sbjct: 133 YQIHTKFRDEIRPRF-GLVRAREFIMKDGYSFHEDAESLDKEFLNTQSAYKEILSDLGLD 191


>gi|188580267|ref|YP_001923712.1| prolyl-tRNA synthetase [Methylobacterium populi BJ001]
 gi|226701310|sp|B1ZA28|SYP_METPB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|179343765|gb|ACB79177.1| prolyl-tRNA synthetase [Methylobacterium populi BJ001]
          Length = 441

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 44/202 (21%), Positives = 81/202 (40%), Gaps = 14/202 (6%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTP 297
           +E+E   HR + R      I ++ +G+  W   G ++   +   +R  + +    EI  P
Sbjct: 16  KEAEIVSHRLMLRAG---MIRQEAAGIYAWLPLGLRVLNKVCDVIRAEQDRAGAVEILMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW++SG +++Y   M  +K   +     R     P        +F    +SY++
Sbjct: 73  TIQAADLWRESGRYEAYGKEMLRLKDRHE-----RELLYGPTAEEVVTEIFRASARSYKD 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYK 416
           LP  L +    +R+E      G MR R F   D + F   +        K+    +  ++
Sbjct: 128 LPKNLYQISWKFRDEVRPRF-GTMRSREFLMKDGYSFDLDQAAARHSYNKVFVSYLRTFE 186

Query: 417 DFGFEKIMVKLSTRPEKRVGSD 438
             G   I ++  T P   +G D
Sbjct: 187 TLGLRAIPMRADTGP---IGGD 205


>gi|315586236|gb|ADU40617.1| proline--tRNA ligase [Helicobacter pylori 35A]
          Length = 577

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 42/180 (23%), Positives = 77/180 (42%), Gaps = 11/180 (6%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           + H+ LA+   ++ +   GSG+  +     K+   + +   +++++   + I    V+  
Sbjct: 21  KSHKHLAQAGYIYQV---GSGIYNFLPLAKKVLDKIENITHKRMQEHGAQNILMSFVVLA 77

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SG  D Y   +   K   D       F L P        +  + +KSY++LPV L
Sbjct: 78  SLWEKSGRLDKYGKELLVFKDRKDN-----DFVLSPTLEENITEIAANFIKSYKQLPVHL 132

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT-KEQMFNECLKIHNLIISIYKDFGFE 421
            +  + +R+E      GL+R R F   D + F    E +  E L   +    I  D G +
Sbjct: 133 YQIHTKFRDEIRPRF-GLVRAREFIMKDGYSFHEDAESLDKEFLNTQSAYKEILSDLGLD 191


>gi|190345647|gb|EDK37570.2| hypothetical protein PGUG_01668 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 526

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 36/162 (22%), Positives = 70/162 (43%), Gaps = 33/162 (20%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDS---YRAN-- 317
           G++ W   GW + + L + + R  +    EE+N   +    LW ++G W++   ++ N  
Sbjct: 41  GLVHWMPPGWNMVRKLQTIIHRHMVGAGAEEVNLSLLSSAELWNKTGRWENNELFKLNDG 100

Query: 318 --MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE--P 373
               A  C ++  +                 +  + + SY+ LP+   +    YR+E  P
Sbjct: 101 ETCLAATCEEEITQ-----------------LVKNQIASYKSLPLLYYQIKEKYRDEKRP 143

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
            G   GL+R R F   DA+ F   E+     ++ +N +++ Y
Sbjct: 144 RG---GLLRGREFLMKDAYSFDIDEK---SAMETYNTVVNAY 179


>gi|50084439|ref|YP_045949.1| alanyl-tRNA synthetase [Acinetobacter sp. ADP1]
 gi|59798530|sp|Q6FCT2|SYA_ACIAD RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|49530415|emb|CAG68127.1| alanyl-tRNA synthetase [Acinetobacter sp. ADP1]
          Length = 878

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 39/154 (25%), Positives = 70/154 (45%), Gaps = 15/154 (9%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSD 117
           ++ I   D R+     HS  H++  A++ I    VQ     +  D   +DF  +QP S +
Sbjct: 546 VDAIVKADIRAATARNHSATHLLHAALRQILGTHVQQKGSLVASDILRFDFANDQPVSFE 605

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESK-KEAYKVEILESIPAKENV 171
           +L +IE+ +   +  +S    + L  E A+      LF  K  +  +V  + S+  + N 
Sbjct: 606 QLQEIERLVNAEVIANSAVTTELLDIESAKAKGAMMLFGEKYGDEVRVLSMGSVIDEHNF 665

Query: 172 TLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAG 205
           ++       +LC G HV+ TG +   FK++   G
Sbjct: 666 SI-------ELCGGIHVQRTGDI-GLFKIISEGG 691


>gi|78485419|ref|YP_391344.1| prolyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
 gi|114152273|sp|Q31GQ3|SYP_THICR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|78363705|gb|ABB41670.1| prolyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
          Length = 572

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 33/134 (24%), Positives = 62/134 (46%), Gaps = 7/134 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
             G+  W   G ++ + + + +R ++ K   +E+  P V    LW++SG  ++Y   +  
Sbjct: 36  AGGLYNWLPLGVRVLRKVEAIIRDEMNKAQAQELLMPVVQPMELWEESGRAEAYGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            K      +  R FAL P +      +    ++SY++LP    +  + +R+E      G+
Sbjct: 96  FKD-----RHQREFALGPTHEEIITDLVRKEIRSYKQLPANFYQIQTKFRDEIRPRF-GV 149

Query: 381 MRVRGFTQDDAHVF 394
           MR R F   DA+ F
Sbjct: 150 MRSREFIMKDAYSF 163


>gi|254418413|ref|ZP_05032137.1| alanyl-tRNA synthetase [Brevundimonas sp. BAL3]
 gi|196184590|gb|EDX79566.1| alanyl-tRNA synthetase [Brevundimonas sp. BAL3]
          Length = 882

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 42/169 (24%), Positives = 76/169 (44%), Gaps = 19/169 (11%)

Query: 50  LSDPVREGSIEI------ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-D 102
           LS  +  G++EI      +   D R      HS AH++  A++++        G +++ +
Sbjct: 533 LSAQITAGTLEIGARVAQLVDADKRMTTRANHSAAHLLHTALKNVLGPAVAQKGQLVDSE 592

Query: 103 GFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESK-KEA 156
              +DF    P + DELA IE ++  +I ++ P   + ++ ++A E     LF  K  + 
Sbjct: 593 RARFDFSHGAPVTEDELAAIEAEVNAVIRQNVPAETRLMAPQEAIEAGAIALFGEKYGDE 652

Query: 157 YKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAG 205
            +V  L      +N          +LC G HV  TG +   FK+++  G
Sbjct: 653 VRVLTLGRSLVSDNAPYS-----VELCGGTHVARTGDI-GLFKVVQETG 695


>gi|89053551|ref|YP_509002.1| prolyl-tRNA synthetase [Jannaschia sp. CCS1]
 gi|114152201|sp|Q28TI5|SYP_JANSC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|88863100|gb|ABD53977.1| prolyl-tRNA synthetase [Jannaschia sp. CCS1]
          Length = 452

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 43/183 (23%), Positives = 77/183 (42%), Gaps = 11/183 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  +G+  W   G+K+ + +   +   +I+  +  +  P +    LWQ+SG +D+Y  
Sbjct: 32  IKQASAGIYSWLPLGYKVLKRIERIVHEEQIRAGHIPMLMPTLQSADLWQKSGRFDAYGP 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  +K   D     R     P N      +    + SY+ LP+ L      +R+E    
Sbjct: 92  EMLRLKDRHD-----RDMLYGPTNEEMITDMVGTFVTSYKSLPLTLYHIQWKFRDEVRPR 146

Query: 377 LHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
             G+MR R F   D + F  TKE   +   +     +  Y+  G + I ++  + P   +
Sbjct: 147 F-GVMRGREFLMKDGYNFDLTKEAALHAYNRHLVSYLRTYERMGLQAIPMRADSGP---I 202

Query: 436 GSD 438
           G D
Sbjct: 203 GGD 205


>gi|156839714|ref|XP_001643545.1| hypothetical protein Kpol_1008p26 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156114160|gb|EDO15687.1| hypothetical protein Kpol_1008p26 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 674

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 63/317 (19%), Positives = 123/317 (38%), Gaps = 55/317 (17%)

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH-V 393
           A++P +       +   ++SYR+LP++L ++ SV R E        +R R F   + H V
Sbjct: 274 AIRPTSETVMYPYYAKWIQSYRDLPLKLNQWNSVVRWEFKHP-QPFLRTREFLWQEGHTV 332

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
           F  +++   E L+I +    +Y++     ++    T  EK  G D      E  +     
Sbjct: 333 FLNEKEAQEEVLQILDFYAGVYEELLAVPVVKGKKTEKEKFAGGD-FTTTVEGYIPQTGR 391

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS 513
            I+ ++   +        G  +   F   +++ +G D                       
Sbjct: 392 GIQGATSHHL--------GQNFSKMFNLSVENPLGPD----------------------- 420

Query: 514 HSEKCHP-VMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTITSSAV--- 565
                HP +  ++  +G   R IG+M+     N    +P  +S  QA+V  +  +     
Sbjct: 421 -----HPKIFAYQNSWGLSTRVIGVMVMIHSDNKGLVIPPRVSQFQAVVVPVGITKKTSE 475

Query: 566 -------EYAQEIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASER 617
                  E A+++ + LK   +    D+  N T  +K  ++ +K IP+ +  G K+  E 
Sbjct: 476 EQRKKIHEAARDVESRLKKSDVRAFGDYNDNYTPGWKFAQYELKGIPLRVEMGPKDIEES 535

Query: 618 SIGIRRFGSTTTQKVSL 634
            + + R   +    V L
Sbjct: 536 QVTVVRRNDSRKYTVKL 552


>gi|297379463|gb|ADI34350.1| prolyl-tRNA synthetase [Helicobacter pylori v225d]
          Length = 577

 Score = 47.8 bits (112), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 42/180 (23%), Positives = 77/180 (42%), Gaps = 11/180 (6%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           + H+ LA+   ++ +   GSG+  +     K+   + +   +++++   + I    V+  
Sbjct: 21  KSHKHLAQAGYIYQV---GSGIYNFLPLAKKVLDKIENITHKRMQEHGAQNILMSFVVLA 77

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SG  D Y   +   K   D       F L P        +  + +KSY++LPV L
Sbjct: 78  SLWEKSGRLDKYGKELLVFKDRKDN-----DFVLSPTLEENITEIAANFIKSYKQLPVHL 132

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT-KEQMFNECLKIHNLIISIYKDFGFE 421
            +  + +R+E      GL+R R F   D + F    E +  E L   +    I  D G +
Sbjct: 133 YQIHTKFRDEIRPRF-GLVRAREFIMKDGYSFHEDAESLDKEFLNTQSAYKEILSDLGLD 191


>gi|255262231|ref|ZP_05341573.1| prolyl-tRNA synthetase [Thalassiobium sp. R2A62]
 gi|255104566|gb|EET47240.1| prolyl-tRNA synthetase [Thalassiobium sp. R2A62]
          Length = 445

 Score = 47.8 bits (112), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 41/183 (22%), Positives = 78/183 (42%), Gaps = 11/183 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  +G+  W   G+K+ + + + +   + K  +  +  P +    LW++SG +D Y  
Sbjct: 32  IKQSAAGIYSWLPLGYKVLKNIENIVHEEQAKAGHMPMLMPTMQSADLWRESGRYDDYGE 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  V     T +  R     P        +F   + SY+++P+ L +    +R+E    
Sbjct: 92  EMLRV-----TDRHGRDMLYTPTAEELITEIFRSHVSSYKDMPLTLYQIQWKFRDEIRPR 146

Query: 377 LHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
             G+MR R F   D + F  TKE   +   +     +  Y+  G + I ++  + P   +
Sbjct: 147 F-GVMRGREFYMKDGYNFDLTKEDALHAYNRHLVSYLRTYERMGLQAIPMRADSGP---I 202

Query: 436 GSD 438
           G D
Sbjct: 203 GGD 205


>gi|161528166|ref|YP_001581992.1| prolyl-tRNA synthetase [Nitrosopumilus maritimus SCM1]
 gi|160339467|gb|ABX12554.1| prolyl-tRNA synthetase [Nitrosopumilus maritimus SCM1]
          Length = 480

 Score = 47.8 bits (112), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 82/388 (21%), Positives = 160/388 (41%), Gaps = 71/388 (18%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRK-----IKDDYEEINTPQVLDQHLWQQSGHWDSYRANM 318
           G+I     G  I+++L +   +K     I++ +  +  P+ L   L ++  H+  +   +
Sbjct: 37  GLIVLRPDGHSIWESLKNTFDKKFAKNGIRNGFLPVLIPESL---LGKEQKHFAGFNPEV 93

Query: 319 FAVK-CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           F V     + I D    AL+P +      +++  ++S+R+LP+++  + +  R E   + 
Sbjct: 94  FWVTHSGTNEIGD--RLALRPTSETLAYTLYSKWIQSWRDLPLKINFWNTALRAEIKAT- 150

Query: 378 HGLMRVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
              +R   F   + H V  T+E+   E +KI    + IYK+   E++ + ++T       
Sbjct: 151 KPFLRTSEFLWQEGHTVHITQEEAEQEVMKI----LDIYKNTVEEELAIPVTTG------ 200

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGT- 495
                              K S +++         GA Y    E I+ D  G+  Q GT 
Sbjct: 201 -------------------KKSEKEKFV-------GAVYTTTMESIMPD--GKALQMGTS 232

Query: 496 --IQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLW 549
             +  +F+ P     F V    +        +  +G   R IG MI     +    LP  
Sbjct: 233 HFLGQNFSKP-----FEVKFADKDNVEHFAWQTSWGVSWRLIGAMIMAHGDDQGLVLPPK 287

Query: 550 LSPIQAIVTTITSS------AVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKK 602
           ++P Q ++  I  +       +   +EI   L++  + ++ D R   +  YK  +  +K 
Sbjct: 288 VAPTQVVIVPIYRNDEGRDKVLPKVKEIQESLEAKDIRVQVDDRQGLSPGYKFNDWEMKG 347

Query: 603 IPIIIICGDKEASERSIGI-RRFGSTTT 629
           +PI I  G K+  ++SI + +R+    T
Sbjct: 348 VPIRIEIGPKDIEKQSIVVAKRYNREKT 375


>gi|317012082|gb|ADU82690.1| prolyl-tRNA synthetase [Helicobacter pylori Lithuania75]
          Length = 577

 Score = 47.8 bits (112), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 42/180 (23%), Positives = 77/180 (42%), Gaps = 11/180 (6%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           + H+ LA+   ++ +   GSG+  +     K+   + +   +++++   + I    V+  
Sbjct: 21  KSHKHLAQAGYIYQV---GSGIYNFLPLAKKVLDKIENITHKRMQEHGAQNILMSFVVLA 77

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SG  D Y   +   K   D       F L P        +  + +KSY++LPV L
Sbjct: 78  SLWEKSGRLDKYGKELLVFKDRKDN-----DFVLSPTLEENITEIAANFIKSYKQLPVHL 132

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKDFGFE 421
            +  + +R+E      GL+R R F   D + F    E +  E L   +    I  D G +
Sbjct: 133 YQIHTKFRDEIRPRF-GLVRAREFIMKDGYSFHEDAESLDKEFLNTQSAYKEILSDLGLD 191


>gi|156049881|ref|XP_001590907.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980]
 gi|154693046|gb|EDN92784.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 576

 Score = 47.8 bits (112), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 90/411 (21%), Positives = 164/411 (39%), Gaps = 65/411 (15%)

Query: 252 EMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLD-QHLWQQSGH 310
           E+  F I    S  I+   + W  FQ  I  +      D EE + P  L  + L ++  H
Sbjct: 83  EISGFFILRPQSMFIWNQIRNW--FQAQIETL------DVEEASFPMFLSSKSLEKEKDH 134

Query: 311 WDSYRANMFAVKCADDTIKDLRT-FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVY 369
            + +   +  V  A D  KDL    A++P +       ++  ++S+R+LP+RL ++ SV 
Sbjct: 135 VEGFAPELAWVTKAGD--KDLEVPVAVRPTSEAVMYPYYSKWIRSHRDLPLRLNQWNSVV 192

Query: 370 RNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLS 428
           R E   +    +R R F   + H    T+E    E L+I      +Y+      ++    
Sbjct: 193 RWEAKQTTP-FLRAREFLWQEGHTAHLTEELAGEEVLQILEFYAGVYEQLLAVPVVRGRK 251

Query: 429 TRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIG 488
           T  EK  G           ++G + +  N    +  T   LG+   +   F+  ++D   
Sbjct: 252 TEKEKFAGGYYT-----TTVEGYIPS--NGRGIQGATSHCLGQN--FSKMFDITVEDPTP 302

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI---ENFKG- 544
           ++                         EK   + + +  +G   R IG+M+    + KG 
Sbjct: 303 KN------------------------GEKAGHLHVWQNSWGLSTRVIGVMVMIHGDDKGL 338

Query: 545 NLPLWLSPIQAIV--------TTITSSAVEY--AQEIANLLKSHHLSIETDFRNE-TINY 593
            LP  ++ +QAI+        TT    A  Y   Q I + LK   +  + D R+  T  +
Sbjct: 339 VLPPRIAKLQAIIIPVGITNKTTPEEKAKRYDELQSIKDTLKKAGVRADYDIRDGYTPAW 398

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD---AIPIL 641
           K  +  +K +P+ +  G ++A++  +   R  +     +S+ +    IP L
Sbjct: 399 KFNDWELKGVPLRLEYGPRDAAQEVVSYARRDTGEKGTISIANLSTEIPAL 449


>gi|308184043|ref|YP_003928176.1| prolyl-tRNA synthetase [Helicobacter pylori SJM180]
 gi|308059963|gb|ADO01859.1| prolyl-tRNA synthetase [Helicobacter pylori SJM180]
          Length = 577

 Score = 47.8 bits (112), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 42/180 (23%), Positives = 77/180 (42%), Gaps = 11/180 (6%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           + H+ LA+   ++ +   GSG+  +     K+   + +   +++++   + I    V+  
Sbjct: 21  KSHKHLAQAGYIYQV---GSGIYNFLPLAKKVLDKIENITHKRMQEHGAQNILMSFVVLA 77

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SG  D Y   +   K   D       F L P        +  + +KSY++LPV L
Sbjct: 78  SLWEKSGRLDKYGKELLVFKDRKDN-----DFVLSPTLEENITEIAANFIKSYKQLPVHL 132

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT-KEQMFNECLKIHNLIISIYKDFGFE 421
            +  + +R+E      GL+R R F   D + F    E +  E L   +    I  D G +
Sbjct: 133 YQIHTKFRDEIRPRF-GLVRAREFIMKDGYSFHEDAESLDKEFLNTQSAYKEILSDLGLD 191


>gi|320164647|gb|EFW41546.1| glutamyl-prolyl-tRNA synthetase [Capsaspora owczarzaki ATCC 30864]
          Length = 1526

 Score = 47.8 bits (112), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 71/320 (22%), Positives = 129/320 (40%), Gaps = 62/320 (19%)

Query: 334  FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
             AL+P +       F   ++S+R+LP+++ ++ +V R E        +R R F   + H 
Sbjct: 1131 IALRPTSETIMYPSFAKWIRSHRDLPLKINQWANVVRWEFKNPTP-FLRTREFLWQEGHT 1189

Query: 394  -FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
             + TK +   E L+I  L   +Y+++                         A  ++KG  
Sbjct: 1190 AYETKPEADKEVLQILELYRRVYEEYL------------------------AVPVIKG-- 1223

Query: 453  DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFY-- 510
               K S +++         G  Y    E I+  + GR  Q  T     NL   F+  +  
Sbjct: 1224 ---KKSEKEKF-------AGGLYTTTVEAIIP-STGRGVQGAT---SHNLGQNFSKMFDI 1269

Query: 511  -VNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTT--ITSS 563
             +  +        + +  +G   R IG+MI     N  L L P    +QA++    IT+S
Sbjct: 1270 LIEDNDRPGQKKHVWQNSWGLTTRTIGVMIMLHGDNKGLVLPPRVASLQAVIVPCGITAS 1329

Query: 564  AVE--------YAQEIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEA 614
              E        Y +++ + L++  + ++ D R N T  YK     ++ +P+ I  G ++ 
Sbjct: 1330 LSEADRAALMAYGKQVEDALRAGGIRVKFDDRDNYTPGYKFNHWELRGVPLRIEVGPRDM 1389

Query: 615  SERSI-GIRR-FGSTTTQKV 632
              + I  +RR  G  T+  V
Sbjct: 1390 KNKQIVAVRRDTGEKTSHSV 1409


>gi|220931621|ref|YP_002508529.1| prolyl-tRNA synthetase [Halothermothrix orenii H 168]
 gi|254782904|sp|B8CW65|SYP_HALOH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|219992931|gb|ACL69534.1| prolyl-tRNA synthetase [Halothermothrix orenii H 168]
          Length = 568

 Score = 47.8 bits (112), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 66/134 (49%), Gaps = 9/134 (6%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKDD--YEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           +GV  +   G+++ +  I  + RK+ D+   +E+  P +    LW++SG W+ +   M  
Sbjct: 37  AGVYSFLPLGYRVIKK-IEGIIRKVMDESGAQEVLMPVIHTSDLWKESGRWEKFGPLM-- 93

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +K  D   +  R + L P +      +    ++SY++LP+ L +  +  R+E      GL
Sbjct: 94  IKFED---RKGREYCLGPTHEEVITDLVRDEIRSYKDLPLNLYQIQTKVRDEIRPRF-GL 149

Query: 381 MRVRGFTQDDAHVF 394
           MR R F   DA+ F
Sbjct: 150 MRSREFIMKDAYSF 163


>gi|119384044|ref|YP_915100.1| prolyl-tRNA synthetase [Paracoccus denitrificans PD1222]
 gi|152112938|sp|A1B1L0|SYP_PARDP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|119373811|gb|ABL69404.1| prolyl-tRNA synthetase [Paracoccus denitrificans PD1222]
          Length = 450

 Score = 47.8 bits (112), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 41/183 (22%), Positives = 76/183 (41%), Gaps = 11/183 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  +G+  W   G+K+ + +   +   + +  +  +  P +    LW++SG +D Y  
Sbjct: 32  IKQQAAGIYSWLPLGYKVLRRIEQIVHEEQARAGHIAMLMPTLQSADLWRESGRYDDYGE 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  +K      +  R     P N      +F   + SY++LP+ L      +R+E    
Sbjct: 92  EMLRIKD-----RHKRDLLYGPTNEEMITDIFRSHVNSYKDLPLTLYHVQWKFRDEIRPR 146

Query: 377 LHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
             G+MR R F   D + F  TKE   +   +     +  Y+  G + I ++    P   +
Sbjct: 147 F-GVMRGREFLMKDGYNFDLTKEDALHAYNRHLVSYLRTYERMGLQAIPMRADGGP---I 202

Query: 436 GSD 438
           G D
Sbjct: 203 GGD 205


>gi|257867713|ref|ZP_05647366.1| prolyl-tRNA synthetase [Enterococcus casseliflavus EC30]
 gi|257874040|ref|ZP_05653693.1| prolyl-tRNA synthetase [Enterococcus casseliflavus EC10]
 gi|257876619|ref|ZP_05656272.1| prolyl-tRNA synthetase [Enterococcus casseliflavus EC20]
 gi|257801796|gb|EEV30699.1| prolyl-tRNA synthetase [Enterococcus casseliflavus EC30]
 gi|257808204|gb|EEV37026.1| prolyl-tRNA synthetase [Enterococcus casseliflavus EC10]
 gi|257810785|gb|EEV39605.1| prolyl-tRNA synthetase [Enterococcus casseliflavus EC20]
          Length = 569

 Score = 47.8 bits (112), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 40/184 (21%), Positives = 80/184 (43%), Gaps = 11/184 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +  +A   +G+  +     ++ + +   +R ++   D  E+  P 
Sbjct: 17  DAETLSHQLLVRAGYIRQVA---AGIYVYLPLAQRVLEKIKRVIREELAQIDAVEMAMPS 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L    W++SG     RA+++       T ++ R   L P +      +  + + SY+ L
Sbjct: 74  LLPYEPWKESG-----RASLYGESLYRLTDRNEREIVLGPTHEEPFTTLIKNEITSYKRL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII-SIYKD 417
           P+ L +  + YR+E      GL+R R F   D + F   E   ++    + +   +I K 
Sbjct: 129 PLSLYQIQTKYRDEQRPRF-GLIRSREFIMQDGYSFHADEASLDQTYNRYEMAYHAILKR 187

Query: 418 FGFE 421
            G E
Sbjct: 188 CGIE 191


>gi|206889362|ref|YP_002248875.1| prolyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM 11347]
 gi|226701352|sp|B5YKW0|SYP_THEYD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|206741300|gb|ACI20357.1| prolyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM 11347]
          Length = 571

 Score = 47.8 bits (112), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 34/155 (21%), Positives = 75/155 (48%), Gaps = 11/155 (7%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYR 315
           ++ +  +G+  +   GW++   +   ++ ++ +   +EI+ P +    +WQ++G W + +
Sbjct: 31  YVRQLAAGLFIFLPLGWRVLNKINMILKEEMERIGAQEISMPILHPAEIWQETGRWYTIK 90

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE--P 373
             MF +K  D T +D+    L   +      + +  +KSYR+LP    +  +  R+E  P
Sbjct: 91  EEMFRLK--DRTGRDM---CLGMTHEEIMTWIASKEIKSYRQLPQIWYQIQTKLRDEARP 145

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
            G   G++R R F   D++ F    +  ++   +H
Sbjct: 146 RG---GVLRTREFIMKDSYSFDIDWEGLDKSYNLH 177


>gi|150866378|ref|XP_001385956.2| proline-tRNA ligase [Scheffersomyces stipitis CBS 6054]
 gi|149387634|gb|ABN67927.2| proline-tRNA ligase [Scheffersomyces stipitis CBS 6054]
          Length = 682

 Score = 47.8 bits (112), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 79/331 (23%), Positives = 130/331 (39%), Gaps = 58/331 (17%)

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
            A++P +       ++  ++S+R+LP++L ++ SV R E        +R R F   + H 
Sbjct: 281 IAIRPTSETVMYPYYSKWIRSHRDLPLKLNQWNSVVRWEFKHP-QPFLRTREFLWQEGHT 339

Query: 394 -FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
              TKE+   E  +I +L   IY++     ++    T  EK  G D              
Sbjct: 340 AHLTKEEAAKEVDEILDLYARIYEELLAVPVVKGKKTENEKFAGGD-------------- 385

Query: 453 DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYV 511
                                 Y    E  +  A GR  Q  T   +  N    FN    
Sbjct: 386 ----------------------YTTTVEGFIA-ATGRGIQGATSHHLGTNFSKMFNISVE 422

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTTI--TSSAV 565
           N        V   +  +G   R IG+M+     N  L L P     QA+V  +  TS   
Sbjct: 423 NPDGADKPRVFAFQNSWGLSTRVIGVMVMTHSDNKGLVLPPRVAQTQAVVIPVGLTSKTT 482

Query: 566 EY--------AQEIANLLKSHHLSIETDFRN-ETINYKIREHSIKKIPIIIICGDKE-AS 615
           +         A +I   LK+  +    D+R+  T  +K  E  +K +P+ I  G K+ +S
Sbjct: 483 DEQRKAINDGAADIEARLKAVDVRAIGDYRDIYTPGWKFAEWELKGVPLRIEFGPKDLSS 542

Query: 616 ERSIGIRR-FGSTTTQKVSLLDA-IPILTKE 644
           E++  +RR  G+  T K++ L+  IP + +E
Sbjct: 543 EQATVVRRDNGAKYTVKLAELETRIPEILEE 573


>gi|73666779|ref|YP_302795.1| alanyl-tRNA synthetase [Ehrlichia canis str. Jake]
 gi|72393920|gb|AAZ68197.1| alanyl-tRNA synthetase [Ehrlichia canis str. Jake]
          Length = 891

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 71/157 (45%), Gaps = 26/157 (16%)

Query: 54  VREGSI---EIITPE---DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYY 106
           ++ GS+   +II  E   + R      HS  H++   ++S+     +  G ++ +D   +
Sbjct: 558 IKTGSLIVGDIICAEVNCEKRKNLCANHSATHLLHYVLKSVIDRSIIQKGSLVSDDKLRF 617

Query: 107 DFDKEQPFSSDELAQIEKKMQEIIARDSPF------LKQYLSHEKARELFESKKEAYKVE 160
           DF      + ++L  IE KM  +I  +SP       LK+ ++ + A  LF  K E + V 
Sbjct: 618 DFSYGVALTKEQLTLIEDKMFSLIRNNSPVVTHICDLKEAIA-DGAVALFTEKYEDHGVR 676

Query: 161 ILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
           ++    +KE            LC G HVR TG++  F
Sbjct: 677 VINIGDSKE------------LCCGTHVRYTGEIGCF 701


>gi|83305847|sp|Q3YSV8|SYA_EHRCJ RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
          Length = 887

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 71/157 (45%), Gaps = 26/157 (16%)

Query: 54  VREGSI---EIITPE---DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYY 106
           ++ GS+   +II  E   + R      HS  H++   ++S+     +  G ++ +D   +
Sbjct: 554 IKTGSLIVGDIICAEVNCEKRKNLCANHSATHLLHYVLKSVIDRSIIQKGSLVSDDKLRF 613

Query: 107 DFDKEQPFSSDELAQIEKKMQEIIARDSPF------LKQYLSHEKARELFESKKEAYKVE 160
           DF      + ++L  IE KM  +I  +SP       LK+ ++ + A  LF  K E + V 
Sbjct: 614 DFSYGVALTKEQLTLIEDKMFSLIRNNSPVVTHICDLKEAIA-DGAVALFTEKYEDHGVR 672

Query: 161 ILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
           ++    +KE            LC G HVR TG++  F
Sbjct: 673 VINIGDSKE------------LCCGTHVRYTGEIGCF 697


>gi|207092740|ref|ZP_03240527.1| prolyl-tRNA synthetase [Helicobacter pylori HPKX_438_AG0C1]
          Length = 204

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 42/180 (23%), Positives = 77/180 (42%), Gaps = 11/180 (6%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           + H+ LA+   ++ +   GSG+  +     K+   + +   +++++   + I    V+  
Sbjct: 21  KSHKHLAQAGYIYQV---GSGIYNFLPLAKKVLDKIENITHKRMQEHGAQNILMSFVVLA 77

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SG  D Y   +   K   D       F L P        +  + +KSY++LPV L
Sbjct: 78  SLWEKSGRLDKYGKELLVFKDRKDN-----DFVLSPTLEENITEIAANFIKSYKQLPVHL 132

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT-KEQMFNECLKIHNLIISIYKDFGFE 421
            +  + +R+E      GL+R R F   D + F    E +  E L   +    I  D G +
Sbjct: 133 YQIHTKFRDEIRPRF-GLVRAREFIMKDGYSFHEDAESLDKEFLNTQSAYKEILSDLGLD 191


>gi|118781249|ref|XP_311362.3| AGAP010644-PA [Anopheles gambiae str. PEST]
 gi|116130081|gb|EAA07061.3| AGAP010644-PA [Anopheles gambiae str. PEST]
          Length = 330

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 57/240 (23%), Positives = 104/240 (43%), Gaps = 20/240 (8%)

Query: 21  ATGSDVAESISRSLAKK-AVAVAINGKVCDLSDPVREGS----IEIITPEDPRSLAVIRH 75
           +T  D A  I     ++ A+A+  N    D+  P+R+      +   +PE   +      
Sbjct: 74  STPYDCARHIGEKYCRQSALALLDNKTPWDMRRPLRDSCTLQLLNFTSPEPHIANKAFWR 133

Query: 76  SCAHIMAEAVQ-SIWPEVQVAI----GPIIEDG-FYYDF---DKEQPFSSDELAQIEKKM 126
           SC+ ++   +Q S  PE  + +     P I+ G F +D    ++    +  EL  +  +M
Sbjct: 134 SCSFLLGAVLQASFKPEAGLFLHSFPKPNIKSGSFVHDIVLAEEHWNPTVPELRALSIEM 193

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN--VTLYRQGEWFDLCR 184
            ++  +D P  +  +S E A E+F      +K E + S+ A+ N  VT+YR GE  D+ +
Sbjct: 194 IKLSQQDLPIERLDVSSELALEMFHDN--PFKREQIPSVAAQNNGQVTVYRVGEHVDISK 251

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GP + STG + +    +  +     G        R+ G A      +  + Y + E+  R
Sbjct: 252 GPMMGSTGLLGRC--TISASHPIKEGSERGKHFYRMQGVALPAVLRIGHFAYNILENRSR 309


>gi|331698443|ref|YP_004334682.1| Prolyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190]
 gi|326953132|gb|AEA26829.1| Prolyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190]
          Length = 577

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 45/213 (21%), Positives = 90/213 (42%), Gaps = 19/213 (8%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +  +A    GV  W   G ++ + +   +R ++     +EI  P 
Sbjct: 15  DAEVPSHKLLVRAGYVRRVA---PGVYSWLPLGLRVLRRIEEIVREEMDAIGAQEIQFPA 71

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L +  ++ +  W  Y  N+F +K  D    D        +  P H  +F   +K    S
Sbjct: 72  LLPRDPYESTNRWTEYGPNLFRLK--DRKGNDY-------LLGPTHEELFTLAVKGEYSS 122

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH-NLIIS 413
           Y++ PV L +  + YR+E      G++R R F   D++ F   ++  +E   +H    + 
Sbjct: 123 YKDYPVILYQIQNKYRDEER-PRAGILRGREFLMKDSYSFDLSDEGLSESYALHRKAYVK 181

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
           ++       ++V  ++       S+    +AE 
Sbjct: 182 VFDRLSLRYVIVSATSGAMGGSASEEFLAEAET 214


>gi|308061592|gb|ADO03480.1| prolyl-tRNA synthetase [Helicobacter pylori Cuz20]
          Length = 577

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 42/180 (23%), Positives = 77/180 (42%), Gaps = 11/180 (6%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           + H+ LA+   ++ +   GSG+  +     K+   + +   +++++   + I    V+  
Sbjct: 21  KSHKHLAQAGYIYQV---GSGIYNFLPLAKKVLDKIENITHKRMQEHGAQNILMSFVVLA 77

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SG  D Y   +   K   D       F L P        +  + +KSY++LPV L
Sbjct: 78  SLWEKSGRLDKYGKELLVFKDRKDN-----DFVLSPTLEENITEIAANFIKSYKQLPVHL 132

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT-KEQMFNECLKIHNLIISIYKDFGFE 421
            +  + +R+E      GL+R R F   D + F    E +  E L   +    I  D G +
Sbjct: 133 YQIHTKFRDEIRPRF-GLVRAREFIMKDGYSFHEDAESLDKEFLNTQSAYKEILSDLGLD 191


>gi|317133026|ref|YP_004092340.1| alanyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
 gi|315471005|gb|ADU27609.1| alanyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
          Length = 874

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 68/138 (49%), Gaps = 19/138 (13%)

Query: 67  PRSLAVIR-HSCAHIMAEAVQSIWPEVQVAIGPIIED-GFYYDFDKEQPFSSDELAQIEK 124
           PR  AV+R HS AH++  A++S+        G ++ D    +DF      ++DELA +EK
Sbjct: 552 PRRRAVMRNHSAAHLLQAALRSVLGTHVQQAGQLVNDRHVRFDFTHFAALTADELAAVEK 611

Query: 125 KMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           ++   I    P + + ++ E+A++     LF S+K    V +++     +          
Sbjct: 612 EVNTAILSALPVVTRTMAVEEAKKTGAMALF-SEKYGDVVRVVQMGDVSK---------- 660

Query: 180 FDLCRGPHVRSTGQVKKF 197
            +LC G HV +TG++  F
Sbjct: 661 -ELCGGTHVDNTGKIGLF 677


>gi|260424720|ref|ZP_05778980.1| proline--tRNA ligase [Dialister invisus DSM 15470]
 gi|260402944|gb|EEW96491.1| proline--tRNA ligase [Dialister invisus DSM 15470]
          Length = 576

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 48/111 (43%), Gaps = 6/111 (5%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           +EI  P      +W+QS  WD Y   MF +       +    + L P +      +    
Sbjct: 69  QEILMPITQPAEIWKQSERWDVYGEEMFKL-----NDRHGHEYCLGPTHEELVTVLAKMD 123

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN 402
             SY++LPV L +  + YR+E      GLMR R F   DA+ F   E+  +
Sbjct: 124 TSSYKQLPVSLYQIQNKYRDEKRPRF-GLMRSREFIMKDAYTFDMDEEGLD 173


>gi|188527045|ref|YP_001909732.1| prolyl-tRNA synthetase [Helicobacter pylori Shi470]
 gi|226701297|sp|B2US70|SYP_HELPS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|188143285|gb|ACD47702.1| prolyl-tRNA synthetase [Helicobacter pylori Shi470]
          Length = 577

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 42/180 (23%), Positives = 77/180 (42%), Gaps = 11/180 (6%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           + H+ LA+   ++ +   GSG+  +     K+   + +   +++++   + I    V+  
Sbjct: 21  KSHKHLAQAGYIYQV---GSGIYNFLPLAKKVLDKIENITHKRMQEHGAQNILMSFVVLA 77

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SG  D Y   +   K   D       F L P        +  + +KSY++LPV L
Sbjct: 78  SLWEKSGRLDKYGKELLVFKDRKDN-----DFVLSPTLEENITEIAANFIKSYKQLPVHL 132

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT-KEQMFNECLKIHNLIISIYKDFGFE 421
            +  + +R+E      GL+R R F   D + F    E +  E L   +    I  D G +
Sbjct: 133 YQIHTKFRDEIRPRF-GLVRAREFIMKDGYSFHEDAESLDKEFLNTQSAYKEILSDLGLD 191


>gi|260911261|ref|ZP_05917862.1| alanine-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295]
 gi|260634634|gb|EEX52723.1| alanine-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295]
          Length = 873

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 104/245 (42%), Gaps = 43/245 (17%)

Query: 40  AVAINGK-VCDLSDPVREG--SIEII-----TPE---------DPRSLAVIRHSCAHIMA 82
            V +NG+   D+ D  RE   SI I+      PE         D R  +   H+  H++ 
Sbjct: 511 GVLVNGEETVDVIDTKRENNQSIHIVKALPKAPEADFMACVDTDKREASAANHTATHLLD 570

Query: 83  EAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYL 141
            A++++  E     G ++  D   +DF   Q  + +EL ++E+ + ++I +D P      
Sbjct: 571 YALKAVLGEHVEQKGSLVAPDTLRFDFSHFQKVTDEELREVERLVNDLIRQDLPL----- 625

Query: 142 SHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLM 201
             ++ R+    + +A     L      + V + R G   + C G H RSTG++   FK++
Sbjct: 626 --DEHRDTPVEEAKAMGAVALFGEKYGDTVRVVRFGPSCEFCGGIHARSTGRI-GMFKIV 682

Query: 202 KVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED 261
                     S   + + I      T +   + +Y LE++       L    +LF+ A+D
Sbjct: 683 ----------SESSVAAGIRRVEALTGKRCEEAMYVLEDT-------LRGIRNLFNNAKD 725

Query: 262 GSGVI 266
             GVI
Sbjct: 726 LQGVI 730


>gi|310778164|ref|YP_003966497.1| alanyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
 gi|309747487|gb|ADO82149.1| alanyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
          Length = 868

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 57/255 (22%), Positives = 112/255 (43%), Gaps = 26/255 (10%)

Query: 52  DPVREGSIEIITPEDPRSLAVIR-HSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFD 109
           D +++G    +T +D R   ++R H+  H++ +A++ +    VQ A   +  D   +DF 
Sbjct: 534 DLLKKGLEVTLTVDDERRRDIMRNHTATHLLHKALKDVLGSHVQQAGSLVDADRLRFDFT 593

Query: 110 KEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKE 169
             +  + D+L ++EK +   I +++    Q+++ ++A+   ES   A   +    +    
Sbjct: 594 HYEAVTRDQLEEVEKIVNRQIFKNTSLKVQHMTLDEAK---ESGSTALFGDKYGDLVRVV 650

Query: 170 NVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQ 229
           NV  Y      +LC G HV  TG++  F  L +   A       R + +     ++ T  
Sbjct: 651 NVPGYSS----ELCGGIHVDRTGEIGLFNILTETGVAA----GTRRIEATTGVASYKTVN 702

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQT----LISYMRR 285
           ++ + +  + ++ K D +         H+ E     I   R+  K  +     L SY   
Sbjct: 703 QMERLILSVSDALKTDPK---------HLEEKIEKTIEAFRETNKELEALKSKLASYEAN 753

Query: 286 KIKDDYEEINTPQVL 300
            + D+ EEIN  +VL
Sbjct: 754 SLFDNIEEINNVKVL 768


>gi|308160413|gb|EFO62904.1| Prolyl-tRNA synthetase [Giardia lamblia P15]
          Length = 542

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 75/375 (20%), Positives = 148/375 (39%), Gaps = 75/375 (20%)

Query: 271 KGWKIFQTLISYMRRKI----KDDYEEINTPQVL------DQHLWQQSGHWDSYRANMFA 320
           KG  +F+    +M   I    +++Y +I   Q L      +  L ++  H   + A  F 
Sbjct: 69  KGCVVFRPYGFFMENAIMKLCEEEYAKIGISQALFPTVIPESFLKKEGDHIKGFEAECFW 128

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           V+       + R  AL+P +     ++F+  ++SY++LP+++ +  +++R+E   +   L
Sbjct: 129 VEKGGLQPLEER-LALRPTSETAIYSMFSKWVRSYKDLPLKIHQTCTIFRHETKNT-KPL 186

Query: 381 MRVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDA 439
           +RVR    ++AH    T E   ++      +I +I+                     SD 
Sbjct: 187 IRVREIHWNEAHCCHATAEDAVSQLSDYWKVIDTIF---------------------SDE 225

Query: 440 LWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVD 499
           L    + + +   D    +    ++  V+                   GR  Q   I   
Sbjct: 226 LCFKGQKLRRVCWDKFAGADYSEVSDVVM-----------------PCGRVLQTAGIH-- 266

Query: 500 FNLPSRFNA----FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN--LPLWLSPI 553
            NL  RF++     Y N  +E  HP +    +   +     + I    G   LP  ++PI
Sbjct: 267 -NLGQRFSSTFDILYANRANENVHPYLTCAGISTRV-LACALSIHGDSGGLVLPPLIAPI 324

Query: 554 QAIVTTITSS----------AVEYAQEIANLLKSH---HLSIETDFRNETINYKIREHSI 600
             ++  I              +E   EIA+ LKS     +S++ DF + ++  K+  + +
Sbjct: 325 HVVIIPIGCGKKNNQESDRQVLEKVNEIADTLKSKLGLRVSVDDDF-SRSMGDKLYYYEL 383

Query: 601 KKIPIIIICGDKEAS 615
           K +P+ I  G ++ +
Sbjct: 384 KGVPLRIEIGQRDLT 398


>gi|83283367|gb|ABC01299.1| prolyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum
           ATCC 27343]
          Length = 437

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 75/364 (20%), Positives = 143/364 (39%), Gaps = 60/364 (16%)

Query: 272 GWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIK 329
           G++I++ +  Y+  + K  + + +  P ++ + L+ ++  H D +   +  V        
Sbjct: 7   GYRIWELIQKYLDEEFKKVNVDNVYFPLLIPESLFNKEKDHIDGFSPEIATVTRVGQKQL 66

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
           +   F ++P +    +  F++ + SYR+LP+   ++ +V R E +      +R   F   
Sbjct: 67  EENLF-IRPTSEVLMMDYFSNEINSYRDLPLIYNQWCNVMRWEKTT--RPFLRTSEFLWQ 123

Query: 390 DAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIM 448
           + H V  +  +  N CLKI N+     K+     ++    T  EK               
Sbjct: 124 EGHTVHSSYNEAENFCLKILNIYEKFAKEILLLPVICGKKTEKEK--------------- 168

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAI--GRDWQCGTIQV-DFNLPSR 505
                                    F G K  Y ++  +  G+  QCGT      N    
Sbjct: 169 -------------------------FAGAKDTYTIESLMFDGQALQCGTSHFFADNFTKV 203

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTIT 561
           ++  + N  ++  H    +   +G   R IG +I     +    LP  +SPIQ  +  I 
Sbjct: 204 YDIKFQNKENKLEHA---YSTSWGVSTRLIGALIMTHSDDNGLVLPSKISPIQVQIIQIK 260

Query: 562 SSAVEYAQEIANLLKSH--HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSI 619
           ++  E   ++  ++K       I+ D  +++  +KI E  IK IPI I  G ++     I
Sbjct: 261 NT--EQIDQVVEIIKDKLSDYRIDVDNSDKSFGFKISEAEIKGIPIRIEIGPRDLENNQI 318

Query: 620 GIRR 623
            I R
Sbjct: 319 TISR 322


>gi|237752004|ref|ZP_04582484.1| alanyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430]
 gi|229376571|gb|EEO26662.1| alanyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430]
          Length = 963

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 32/125 (25%), Positives = 58/125 (46%), Gaps = 9/125 (7%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++  A++ I        G ++E +   +DF   +  ++DEL QIE  +   IA  
Sbjct: 660 HSATHLLHYALRQILGSHIAQAGSLVETNRLRFDFSHPKALNTDELEQIEALVNSKIAES 719

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQ 193
           SP + + +   +A+        A     L      ENV +   G+  +LC G H+++T +
Sbjct: 720 SPQVCETMGITEAK--------AKGAMALFGEKYGENVRVISFGDSIELCGGIHIQNTAE 771

Query: 194 VKKFF 198
           +  F+
Sbjct: 772 IGSFY 776


>gi|89075398|ref|ZP_01161815.1| prolyl-tRNA synthetase [Photobacterium sp. SKA34]
 gi|89048814|gb|EAR54384.1| prolyl-tRNA synthetase [Photobacterium sp. SKA34]
          Length = 571

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 40/163 (24%), Positives = 73/163 (44%), Gaps = 10/163 (6%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINT--PQVLDQHLWQQSGHWDSYRANMF 319
            SG+  W   G ++ + + + +R++I D+   I T  P V    LW+++G     R+   
Sbjct: 36  ASGLYAWLPTGLRVLRKVENIVRQEI-DNAGAIETLMPVVQPFELWEETG-----RSEKM 89

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHG 379
             +    T +  R F L P       ++  + + SY++LP+ L +  + +R+E      G
Sbjct: 90  GPELLRFTDRHARPFVLSPTAEEVFTSLVRNEVNSYKQLPLNLYQIQTKFRDERRPRF-G 148

Query: 380 LMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFE 421
           +MR R F   DA+ F   KE +      +H+     +   G E
Sbjct: 149 VMRAREFCMMDAYSFDIDKEGLQKSYDAMHDAYCKAFDRMGLE 191


>gi|316932874|ref|YP_004107856.1| alanyl-tRNA synthetase [Rhodopseudomonas palustris DX-1]
 gi|315600588|gb|ADU43123.1| alanyl-tRNA synthetase [Rhodopseudomonas palustris DX-1]
          Length = 890

 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 33/133 (24%), Positives = 62/133 (46%), Gaps = 7/133 (5%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKM 126
           RS     HS  H++ EA++ +  +     G ++  D   +DF  ++P + DEL ++E   
Sbjct: 557 RSAIRANHSATHLLHEALRQVLGDHIAQKGSLVAPDRLRFDFVHQKPITQDELRKVEDIA 616

Query: 127 QEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
            +I+  +   + + ++ + ARE     LF  +K   +V ++    A         G   +
Sbjct: 617 NDIVLENDEVVTRLMAVDDAREAGARALF-GEKYGDEVRVVSMGKAAREHGSNALGWSVE 675

Query: 182 LCRGPHVRSTGQV 194
           LC G HV+ TG +
Sbjct: 676 LCGGTHVKRTGDI 688


>gi|253581047|ref|ZP_04858308.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251847710|gb|EES75679.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 479

 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 70/150 (46%), Gaps = 13/150 (8%)

Query: 474 FYGPKFEYILKDAI--GRDWQCGTIQVDFNLPSRF-NAFYVNSHSEKCHPVMIHRAVFGS 530
           F G +  Y ++  +  G+  Q GT     N    F  AF +    ++     +H+  +G 
Sbjct: 209 FSGAEATYTIESLMHDGKALQSGT---SHNFGDGFARAFGIQYTDKENKLQYVHQTSWGM 265

Query: 531 IERFIGIMI----ENFKGNLPLWLSPIQAIVTTITS---SAVEYAQEIANLLKSHHLSIE 583
             R IG +I    +N    LP  ++P+QA++  I       +E A E+   LK+  + ++
Sbjct: 266 TTRMIGAIIMVHGDNSGLVLPPRIAPVQAVIIPIQQRKEGVLEKADEMFAALKAAGVRVK 325

Query: 584 TDFRNETINYKIREHSIKKIPIIIICGDKE 613
            D  +++  +K  E  ++ IPI I CG K+
Sbjct: 326 VDDTDKSPGFKFAEQEMRGIPIRIECGPKD 355


>gi|325663512|ref|ZP_08151922.1| prolyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA]
 gi|325470411|gb|EGC73642.1| prolyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA]
          Length = 564

 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 36/151 (23%), Positives = 74/151 (49%), Gaps = 15/151 (9%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  SG+      G ++ + +   +R ++     +E+  P ++ + ++++SG  +++ +
Sbjct: 32  IKKSSSGIYMIMPMGKRVLKKIEEIVREEMDAAGAQELLMPAMIPEEIYEKSGRREAFGS 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL----KSYRELPVRLAEFGSVYRNE 372
           NMFA+K   D  +  + + L P     H  +F         SY++ P  L +  + +R+E
Sbjct: 92  NMFALK---DRYQ--KNYVLGPT----HEELFTMAAMMKGSSYKDFPYNLYQIQTKFRDE 142

Query: 373 PSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE 403
            +   +GL+RVR F   DA+ F   E   +E
Sbjct: 143 -TRPRYGLIRVREFIMKDAYSFDIDEAGLHE 172


>gi|331087039|ref|ZP_08336114.1| prolyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA]
 gi|330409489|gb|EGG88932.1| prolyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA]
          Length = 564

 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 36/151 (23%), Positives = 74/151 (49%), Gaps = 15/151 (9%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  SG+      G ++ + +   +R ++     +E+  P ++ + ++++SG  +++ +
Sbjct: 32  IKKSSSGIYMIMPMGKRVLKKIEEIVREEMDAAGAQELLMPAMIPEEIYEKSGRREAFGS 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL----KSYRELPVRLAEFGSVYRNE 372
           NMFA+K   D  +  + + L P     H  +F         SY++ P  L +  + +R+E
Sbjct: 92  NMFALK---DRYQ--KNYVLGPT----HEELFTMAAMMKGSSYKDFPYNLYQIQTKFRDE 142

Query: 373 PSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE 403
            +   +GL+RVR F   DA+ F   E   +E
Sbjct: 143 -TRPRYGLIRVREFIMKDAYSFDIDEAGLHE 172


>gi|319784062|ref|YP_004143538.1| alanyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317169950|gb|ADV13488.1| alanyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 888

 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 40/159 (25%), Positives = 71/159 (44%), Gaps = 15/159 (9%)

Query: 45  GKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-D 102
           GKV   S  V+ G+ +E+      RS     HS  H++ EA++ +        G ++  +
Sbjct: 535 GKVA--SGTVKTGAAVELKVDHARRSRLRANHSATHLIHEALREVLGSHVAQKGSLVAPE 592

Query: 103 GFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLS-----HEKARELFESK--KE 155
              +D    +P S+++L ++E+   EI+ ++ P   + +S      E A  LF  K   E
Sbjct: 593 RLRFDISHNKPISAEDLEEVERMANEIVVQNGPVTTRLMSVDDAIAEGAMALFGEKYGDE 652

Query: 156 AYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQV 194
              V +   +   +    Y      +LC G HVR+TG +
Sbjct: 653 VRVVSMGTGLHGAKANRPYS----VELCGGTHVRATGDI 687


>gi|307200437|gb|EFN80646.1| Bifunctional aminoacyl-tRNA synthetase [Harpegnathos saltator]
          Length = 1483

 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 70/319 (21%), Positives = 119/319 (37%), Gaps = 59/319 (18%)

Query: 319  FAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLH 378
            +  KC D  + +    A++P +       +   L+S  ELP++L ++ +V R E      
Sbjct: 1068 WVTKCGDSDLAE--PVAIRPTSETVMYPAYAKWLRSDTELPLKLNQWNNVVRWEFKDP-K 1124

Query: 379  GLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGS 437
              +R R F   + H  F TK++   E L I +L   +Y++     ++    T  EK  G 
Sbjct: 1125 PFLRTREFLWQEGHTAFATKKEAEEEVLTILDLYSRVYEELLAVPVIKGRKTEKEKFAGG 1184

Query: 438  DALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI- 496
            D                                    Y    E  +  A GR  Q  T  
Sbjct: 1185 D------------------------------------YTTTVEAFI-SASGRAIQGATSH 1207

Query: 497  QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSP 552
             +  N    FN   V   +E      +++  +G   R IG+MI    ++    +P  ++P
Sbjct: 1208 HLGQNFSKMFN-IQVEGATESEEKTFVYQNSWGLTTRTIGVMIMVHGDDRGLMVPPMVAP 1266

Query: 553  IQAIV--TTITSSAVEYAQEIAN---------LLKSHHLSIETDFRNE-TINYKIREHSI 600
            IQA++    I +S     +E  N         LL+     +  D+RN  T  +K     +
Sbjct: 1267 IQAVLIPCGIAASTTMEQKERLNYECEKLRTELLEIGKFRMGVDYRNNRTPGWKFNHWEL 1326

Query: 601  KKIPIIIICGDKEASERSI 619
            K +P+ I  G  E  +  +
Sbjct: 1327 KGVPVRIELGPAEVEKHQV 1345


>gi|218260218|ref|ZP_03475604.1| hypothetical protein PRABACTJOHN_01265 [Parabacteroides johnsonii
           DSM 18315]
 gi|218224670|gb|EEC97320.1| hypothetical protein PRABACTJOHN_01265 [Parabacteroides johnsonii
           DSM 18315]
          Length = 526

 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 67/300 (22%), Positives = 124/300 (41%), Gaps = 56/300 (18%)

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECL 405
            + + ++SYR+LP+   ++ +V R E    L   +R   F   + H    T+E+   E  
Sbjct: 167 TYRNWIQSYRDLPILCNQWANVMRWEMRTRL--FLRTAEFLWQEGHTAHATREEAEIEAK 224

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
           K+      +Y DF  E  M                   A  ++KGV      S+ +R   
Sbjct: 225 KMQ----GVYADFA-ENYM-------------------AMPVVKGV-----KSASERF-- 253

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIH 524
                 GA      E +++D  G+  Q GT   +  N    F+  +++ + +  +     
Sbjct: 254 -----AGALDTYTIEAMMQD--GKALQAGTSHFLGQNFGKAFDVTFIDKNGKNEYAWATS 306

Query: 525 RAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTITSSAVEYAQ------EIANL 574
              +G   R IG +I +   +    LP  L+PIQ ++  I  SA + AQ       I   
Sbjct: 307 ---WGVSTRLIGALIMSHSDDNGLVLPPHLAPIQVVIIPIYRSAEQLAQISEKVNGIVAK 363

Query: 575 LKSHHLSIE-TDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
           LK+  +S++  D  N+   +K  E+ +K +P+ +  G ++    +I + R  +   + V+
Sbjct: 364 LKALGISVKFDDADNKKPGWKFAEYELKGVPVRLAMGGRDLENNTIEVMRRDTLEKETVT 423


>gi|210623133|ref|ZP_03293599.1| hypothetical protein CLOHIR_01549 [Clostridium hiranonis DSM 13275]
 gi|210153810|gb|EEA84816.1| hypothetical protein CLOHIR_01549 [Clostridium hiranonis DSM 13275]
          Length = 482

 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 69/302 (22%), Positives = 117/302 (38%), Gaps = 55/302 (18%)

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI 411
           LKSYRELP    ++ SV R E +      +R   F   + H   T  + + E  K    I
Sbjct: 129 LKSYRELPYLYNQWCSVVRWEKT--TRPFLRTSEFLWQEGH---TLHETYEEAEKETLDI 183

Query: 412 ISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
           + +YK+     +   L   P                   V+D  K+ S+           
Sbjct: 184 LQMYKE-----VCEDLLAMP-------------------VIDGQKSESEK---------- 209

Query: 472 GAFYGPKFEYILKDAI--GRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
             F G +  Y ++  +  G+  Q GT   +  +    F+  + +      HP   +   +
Sbjct: 210 --FAGGERTYTIEAMMHDGKALQSGTSHFLGQHFTKAFDITFADREGGMSHP---YHTSW 264

Query: 529 GSIERFIGIMIENFKGN----LPLWLSPIQAIVTTITSS---AVEYAQEIANLLKSHHLS 581
           G   R IG +I     N    LP  ++P Q ++  I ++    +E   E+   LK     
Sbjct: 265 GISTRLIGGLIMTHSDNRGLVLPPRIAPTQVMIIPIAANKGGVMEKVDELYAALKEKGAR 324

Query: 582 IETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
           +E D R N +  YK+ +  +K IP+ I  G K+       + R  +   + VSL + +  
Sbjct: 325 VEVDDRPNYSTGYKLNDSEMKGIPVRIEIGPKDIENNQAMVFRRDTLEKEAVSLDNLVEY 384

Query: 641 LT 642
           +T
Sbjct: 385 VT 386


>gi|118475098|ref|YP_892193.1| alanyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40]
 gi|205830013|sp|A0RPR0|SYA_CAMFF RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|118414324|gb|ABK82744.1| alanyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40]
          Length = 845

 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 61/130 (46%), Gaps = 19/130 (14%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++  A++++        G  +E D   +DF   +P + +EL +IE  + E I + 
Sbjct: 552 HSATHLLQAALRNVLGAHIAQAGSSVEADKLRFDFSHPKPVTKEELEKIENFVNEAILKG 611

Query: 134 SPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           +P   + +  + A++     LF  +K A KV +L   P+KE            LC G HV
Sbjct: 612 APAKIEIMDIQNAKKSGAIALF-GEKYADKVRVLTLGPSKE------------LCGGTHV 658

Query: 189 RSTGQVKKFF 198
            +  ++  FF
Sbjct: 659 ENLNEIGSFF 668


>gi|315046950|ref|XP_003172850.1| bifunctional aminoacyl-tRNA synthetase [Arthroderma gypseum CBS
           118893]
 gi|311343236|gb|EFR02439.1| bifunctional aminoacyl-tRNA synthetase [Arthroderma gypseum CBS
           118893]
          Length = 604

 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 84/406 (20%), Positives = 158/406 (38%), Gaps = 61/406 (15%)

Query: 261 DGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH-LWQQSGHWDSYRANM 318
           D SG        + I++ + S+   KIK  + +  + P  + +  L ++  H + + A +
Sbjct: 114 DVSGCFVLKPHSFFIWEQIQSWFDAKIKQMNVKNCSFPLFVSEDVLKKEKDHIEGFAAEV 173

Query: 319 FAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLH 378
             V  A ++  + +  A++P +       +   ++S+R+LP++L ++ SV R E   +  
Sbjct: 174 AWVTHAGNSALE-KKIAIRPTSETVMYPYYAKWIRSHRDLPLKLNQWNSVVRWE-FKNPQ 231

Query: 379 GLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGS 437
             +R R F   + H    TKE+   E L+I      +Y++     ++    T  EK  G 
Sbjct: 232 PFLRTREFLWQEGHTAHLTKEEAHEEVLQILQHYAHVYEELLAVPVIQGQKTDKEKFAG- 290

Query: 438 DALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ 497
                    +    ++    ++   I  G   G G  +   F   ++D   R        
Sbjct: 291 --------GLYTTTVEGYIPATGRGIQGGTSHGLGQNFSKMFGITVEDPSARP------- 335

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP----I 553
                             EK  P+ + +  +G   R IG+M+     N  L L P    I
Sbjct: 336 -----------------DEKKPPLHVWQNSWGLSTRTIGVMVMIHGDNRGLVLPPRVADI 378

Query: 554 QAIVTTITSSA----------VEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKK 602
           Q ++  +   A          +   + IA +L +  + +E D R+  T  +K  +  +K 
Sbjct: 379 QTVIVPVGLGAKTPDDERAAIMAEIEAIATVLSAAGVRVEVDKRDGYTPGWKFNDWELKG 438

Query: 603 IPIIIICGDKEA-------SERSIGIRRFGSTTTQKVSLLDAIPIL 641
           IP+ +  G  E+       S R I  +   S+   K  L  A+P L
Sbjct: 439 IPLRLEFGPGESAGSFVTTSRRDIAGKEGKSSIAIK-DLGTAVPAL 483


>gi|229056233|ref|ZP_04195655.1| Prolyl-tRNA synthetase 2 [Bacillus cereus AH603]
 gi|229165394|ref|ZP_04293179.1| Prolyl-tRNA synthetase 2 [Bacillus cereus AH621]
 gi|228618078|gb|EEK75118.1| Prolyl-tRNA synthetase 2 [Bacillus cereus AH621]
 gi|228721106|gb|EEL72643.1| Prolyl-tRNA synthetase 2 [Bacillus cereus AH603]
          Length = 476

 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 79/396 (19%), Positives = 155/396 (39%), Gaps = 61/396 (15%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHLWQ-QSGHWDSYRANMFAV 321
           G +     G+ +++ +   M  K+K+  +E +  P  + + L Q +  H + +   +  V
Sbjct: 37  GCMILRPYGYALWENMQKVMDEKLKESGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWV 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
               D  K      ++P +       F+  ++SY +LP    ++ SV R E +      +
Sbjct: 97  THGGDE-KLAERLCIRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKT--TRPFL 153

Query: 382 RVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           R   F   + H +  T E+   E L I NL  +  +++    ++    T  EK  G+ A 
Sbjct: 154 RTTEFLWQEGHTIHETAEESQIETLNILNLYAAFCEEYLAIPVIKGQKTEKEKFAGAKAT 213

Query: 441 WDDAENIMKGVLDTIKNSSQD--RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
           +            TI++   D   + TG     G  +   F+    D  G+ WQ      
Sbjct: 214 Y------------TIESLMHDGKALQTGTSHNFGTNFSEAFDIKFLDRNGK-WQ------ 254

Query: 499 DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQ 554
                                   +H+  +G   R IG +I     N    +P  ++P+Q
Sbjct: 255 -----------------------YVHQTSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPLQ 291

Query: 555 AIVTTITS---SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
            ++  I       +E A E+   ++     ++ D  N+T  +K  E+ +K +PI +  G 
Sbjct: 292 VVIVPIAQHKEGVLEKATELQGRIQKV-ARVKIDASNKTPGWKFNEYEMKGVPIRLEVGP 350

Query: 612 KEASERSIGIRRFGSTTTQKVS---LLDAIPILTKE 644
           K+  +  + + R  +   + ++   L + IP L +E
Sbjct: 351 KDIEKNQVVLVRRDTKEKEFIAMDQLEERIPSLLEE 386


>gi|302554518|ref|ZP_07306860.1| prolyl-tRNA synthetase [Streptomyces viridochromogenes DSM 40736]
 gi|302472136|gb|EFL35229.1| prolyl-tRNA synthetase [Streptomyces viridochromogenes DSM 40736]
          Length = 566

 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 39/174 (22%), Positives = 78/174 (44%), Gaps = 18/174 (10%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R     ++    +G+  W   G K+   +   +R ++     +E+  P 
Sbjct: 23  DAEVLSHKLLVRA---GYVRRTAAGIWSWLPLGKKVLANVERIVREEMDAVGAQEVLLPA 79

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L +  ++ +G W+ Y   +F  +  D    D        +  P H  +F   +K    S
Sbjct: 80  ILPREPYEATGRWEEYGPELF--RLQDRKGGDY-------LLGPTHEEIFTLLVKDQASS 130

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
           Y++LPV L +  + YR+E +    G++R R F   D++ F T ++   +   +H
Sbjct: 131 YKDLPVILYQIQNKYRDE-ARPRAGILRGREFLMKDSYSFDTDDEGLAQSYALH 183


>gi|281411980|ref|YP_003346059.1| phosphoribulokinase/uridine kinase [Thermotoga naphthophila RKU-10]
 gi|281373083|gb|ADA66645.1| phosphoribulokinase/uridine kinase [Thermotoga naphthophila RKU-10]
          Length = 555

 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 44/191 (23%), Positives = 82/191 (42%), Gaps = 5/191 (2%)

Query: 11  DGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDL-SDPVREGSIEIITPEDPRS 69
           DG    F  +    D+A    +    K +A  +N ++ +L   P R G +E +   DP  
Sbjct: 11  DGREIVFEENQNLFDIAREYQKYYRYKILAARVNNRIIELFRTPDRSGELEFLDLTDPDG 70

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPF---SSDELAQIEKKM 126
           L + +     + + AV+ +  E ++ +   +  G Y +  K         +++  I+ KM
Sbjct: 71  LRIYQRGLVFLASLAVRKLNSEWRLKVLHSLGKGIYCEIYKGNELIVPDQNQVFAIKDKM 130

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGP 186
           +E++ +D P  K+    ++ARE+   K+   K   L     K  V LY    ++    G 
Sbjct: 131 RELVEKDLPIEKRTFYKDEAREIL-MKEGLVKTVNLFKYRKKRTVKLYHCDGFWAYFYGY 189

Query: 187 HVRSTGQVKKF 197
              STG++  F
Sbjct: 190 LPPSTGRIDVF 200


>gi|15643514|ref|NP_228560.1| uridine kinase-related protein [Thermotoga maritima MSB8]
 gi|148269323|ref|YP_001243783.1| phosphoribulokinase/uridine kinase [Thermotoga petrophila RKU-1]
 gi|4981276|gb|AAD35832.1|AE001744_22 uridine kinase-related protein [Thermotoga maritima MSB8]
 gi|147734867|gb|ABQ46207.1| phosphoribulokinase/uridine kinase [Thermotoga petrophila RKU-1]
          Length = 555

 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 44/191 (23%), Positives = 82/191 (42%), Gaps = 5/191 (2%)

Query: 11  DGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDL-SDPVREGSIEIITPEDPRS 69
           DG    F  +    D+A    +    K +A  +N ++ +L   P R G +E +   DP  
Sbjct: 11  DGREIVFEENQNLFDIAREYQKYYRYKILAARVNNRIIELFRTPDRSGELEFLDLTDPDG 70

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPF---SSDELAQIEKKM 126
           L + +     + + AV+ +  E ++ +   +  G Y +  K         +++  I+ KM
Sbjct: 71  LRIYQRGLVFLASLAVRKLNSEWRLKVLHSLGKGIYCEIYKGNELIVPDQNQVFAIKDKM 130

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGP 186
           +E++ +D P  K+    ++ARE+   K+   K   L     K  V LY    ++    G 
Sbjct: 131 RELVEKDLPIEKRTFYKDEAREIL-MKEGLVKTVNLFKYRKKRTVKLYHCDGFWAYFYGY 189

Query: 187 HVRSTGQVKKF 197
              STG++  F
Sbjct: 190 LPPSTGRIDVF 200


>gi|91772258|ref|YP_564950.1| prolyl-tRNA synthetase [Methanococcoides burtonii DSM 6242]
 gi|121689406|sp|Q12ZC6|SYP_METBU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|91711273|gb|ABE51200.1| Prolyl-tRNA synthetase [Methanococcoides burtonii DSM 6242]
          Length = 478

 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 73/383 (19%), Positives = 152/383 (39%), Gaps = 56/383 (14%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVL-DQHLWQQSGHWDSYRANMFAVK 322
           G   W+  G+ I + +   +R  +  D++E   P ++ +    +++ H   +   ++ V 
Sbjct: 38  GSYVWYPFGFSIRRNVYDIIRGLLDKDHQETLFPLLIPENEFMKEAEHIKGFEEEVYWVL 97

Query: 323 CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMR 382
               T  D++  AL+P +      ++   ++S+ +LP++L +  + +R E +     L+R
Sbjct: 98  NGGTTPLDVK-LALRPTSETAIYPMYRLWVRSHADLPLKLYQIVNTFRYE-TKHTRPLIR 155

Query: 383 VRGFTQ-DDAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           +R  T   +AH V  T ++  ++  +   L I  YK      I V  S RP         
Sbjct: 156 LREITSFKEAHTVHATWDEAASQVEEAIRLYIEFYKRLA---IPVLPSKRPS-------- 204

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI-QVD 499
           WD                             GA Y    + ++ D  G+  Q GT   + 
Sbjct: 205 WDKF--------------------------PGADYTIAVDSLMPD--GKTLQVGTAHHLG 236

Query: 500 FNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQA 555
            N    F+  Y +   E+   V  H+  +G  ER I  ++     +    LP  ++P Q 
Sbjct: 237 DNFAKTFDIKYEDVDGEQ---VYAHQTCYGVSERCIATLLSTHGDDKGLVLPPEVAPTQV 293

Query: 556 IVTTIT----SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
           ++  I      + +    ++   L++  + +  D  ++    K  +  +K +P+ I  G 
Sbjct: 294 VIIPIIFKEPEAVLNACNDVKAELEAAGVRVTIDDSDKRPGSKYYKWEMKGVPLRIEIGP 353

Query: 612 KEASERSIGIRRFGSTTTQKVSL 634
           ++    +  + R  +   ++V L
Sbjct: 354 RDLKNEAAMLARRDTGEKEQVPL 376


>gi|325265418|ref|ZP_08132142.1| alanine--tRNA ligase [Clostridium sp. D5]
 gi|324029419|gb|EGB90710.1| alanine--tRNA ligase [Clostridium sp. D5]
          Length = 879

 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 64/139 (46%), Gaps = 8/139 (5%)

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           E+      RSL+   HS  H++ +A++++    V+ A   + ED   +DF      S +E
Sbjct: 551 ELAVDARKRSLSARNHSATHLLQKALRTVLGTHVEQAGSSVNEDRLRFDFTHFSALSQEE 610

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L Q+E  + E IA   P   Q +  E+AR   ++  +A   E    I    N+     G 
Sbjct: 611 LKQVENIVNEHIAEALPVDIQNMPIEEAR---KTGAQALFGEKYGDIVRVVNMG----GF 663

Query: 179 WFDLCRGPHVRSTGQVKKF 197
             + C G HV++T ++  F
Sbjct: 664 SIEFCGGTHVKNTSEIMAF 682


>gi|109899322|ref|YP_662577.1| alanyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
 gi|123360521|sp|Q15RG5|SYA_PSEA6 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|109701603|gb|ABG41523.1| alanyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
          Length = 865

 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 36/140 (25%), Positives = 64/140 (45%), Gaps = 21/140 (15%)

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIA 131
           + HS  H+M  A++SI  E     G +++ D   +DF   +  S +++  +E  + E I 
Sbjct: 552 LNHSATHLMHAALKSILGEHVNQKGSLVQADRLRFDFSHFEAMSKEQVLAVETMVNEQIL 611

Query: 132 RDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRG 185
            + P   Q +  E+A+E     LF  K +             ++V +   G +  +LC G
Sbjct: 612 ANHPLQTQLMGLEQAKEAGAMALFGEKYD-------------DDVRVVSMGSFSMELCGG 658

Query: 186 PHVRSTGQVKKFFKLMKVAG 205
            HV  TG +   FK++  +G
Sbjct: 659 THVERTGDI-GLFKIISESG 677


>gi|39936908|ref|NP_949184.1| alanyl-tRNA synthetase [Rhodopseudomonas palustris CGA009]
 gi|48428511|sp|P61706|SYA_RHOPA RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|39650765|emb|CAE29288.1| alanyl-tRNA synthetase [Rhodopseudomonas palustris CGA009]
          Length = 889

 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 33/133 (24%), Positives = 63/133 (47%), Gaps = 7/133 (5%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKM 126
           RS     HS  H++ EA++ +  +     G ++  D   +DF  ++P + DEL ++E   
Sbjct: 557 RSAIRANHSATHLLHEALRQVLGDHIAQKGSLVAPDRLRFDFVHQKPITQDELRKVEDIA 616

Query: 127 QEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
            +I+  +   + + ++ + ARE     LF  +K   +V ++    A  +      G   +
Sbjct: 617 NDIVLENDEVVTRLMAVDDAREAGARALF-GEKYGDEVRVVSMGKAARDHGSNVFGWSVE 675

Query: 182 LCRGPHVRSTGQV 194
           LC G HV+ TG +
Sbjct: 676 LCGGTHVKRTGDI 688


>gi|320593564|gb|EFX05973.1| prolyl-tRNA synthetase [Grosmannia clavigera kw1407]
          Length = 554

 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 91/398 (22%), Positives = 161/398 (40%), Gaps = 43/398 (10%)

Query: 252 EMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLD-QHLWQQSGH 310
           E+  F+I    S  I+   + W  FQ  I +M        EE + P  L  + L ++  H
Sbjct: 76  EIAGFYILRPASMYIWNVIRKW--FQQRIEHM------GVEETSFPMFLSAKSLEKEKDH 127

Query: 311 WDSYRANMFAVKCADDTIKDLRT-FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVY 369
            + +   +  V  A D  KDL    A++P +       ++  ++S+R+LP+RL ++ SV 
Sbjct: 128 VEGFAPELAWVTKAGD--KDLEVPVAVRPTSEAVMYPYYSKWIRSHRDLPLRLNQWNSVV 185

Query: 370 RNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLS 428
           R E   +    +R R F   + H    T+E    E L+I  L   +Y+      ++    
Sbjct: 186 RWEAKQTTP-FLRAREFLWQEGHTAHLTEELAGEEVLEILELYAGVYEQLLAVPVVRGRK 244

Query: 429 TRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIG 488
           T  EK  G           ++G + T  N    +  T   LG+   +   F+  ++D   
Sbjct: 245 TENEKFAGGYYT-----TTVEGYIPT--NGRGIQGATSHCLGQN--FSKMFDITVEDPQV 295

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPL 548
           +       Q  + L +R     V  H +    V+  R     I +   I+I       P+
Sbjct: 296 KGQHRHVWQNSWGLSTRVIGVMVMIHGDDKGLVLPPR-----IAKIQAILI-------PV 343

Query: 549 WLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPII 606
            L+   A +T    +A V    E+A  +K+  + +E D R   T  +K  +  +K +P+ 
Sbjct: 344 GLN---AKMTADEKAAHVARCDELAAQIKAAGVRVEVDVREGYTPAWKFNDWELKGVPLR 400

Query: 607 IICGDKEASERSIGIRRFGSTTTQKV---SLLDAIPIL 641
           +  G K+  +  I   R  +     +   +L   IP+L
Sbjct: 401 LEFGPKDREKNVISFARRDTAEKGTIPLGALATDIPVL 438


>gi|221124302|ref|XP_002161215.1| PREDICTED: hypothetical protein [Hydra magnipapillata]
          Length = 587

 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 31/134 (23%), Positives = 64/134 (47%), Gaps = 7/134 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           G+G+  +   G ++ + + + +R ++ +    E+  P +    LWQ++G +D     +  
Sbjct: 10  GAGIYNYMPMGLRVIRKVEAIVREEMNRAGAVELTMPVIQPAELWQETGRFDKMGPELLR 69

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +K      +  R + ++P +      +    +KSY++LP  L +  + +R+E      GL
Sbjct: 70  IK-----DRHERDYVVQPTSEEVVTDIARQEIKSYKQLPKNLYQIQTKFRDERRPRF-GL 123

Query: 381 MRVRGFTQDDAHVF 394
           MR R F   DA+ F
Sbjct: 124 MRGREFIMKDAYSF 137


>gi|330720665|gb|EGG98912.1| Prolyl-tRNA synthetase [gamma proteobacterium IMCC2047]
          Length = 576

 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 32/134 (23%), Positives = 61/134 (45%), Gaps = 7/134 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            +G+  W   G ++ +   + +R ++ +    E+  P V    LW+++G W  +   +  
Sbjct: 36  AAGLYTWSPLGLRVLRKSENIIREEMNRAGALELLMPAVQPAELWEETGRWGQFGDELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           VK      +  R F + P +      +  + L SY++LPV   +  + +R+E      G+
Sbjct: 96  VKD-----RHGREFCIGPTHEEVITDLARNELSSYKQLPVNFYQIQTKFRDERRPRF-GV 149

Query: 381 MRVRGFTQDDAHVF 394
           MR R F   DA+ F
Sbjct: 150 MRSREFLMKDAYSF 163


>gi|189463515|ref|ZP_03012300.1| hypothetical protein BACCOP_04234 [Bacteroides coprocola DSM 17136]
 gi|189429782|gb|EDU98766.1| hypothetical protein BACCOP_04234 [Bacteroides coprocola DSM 17136]
          Length = 153

 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 33/126 (26%), Positives = 61/126 (48%), Gaps = 13/126 (10%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDS 134
           H+C HI+   + +I+   +     I       DF   +  S +++  IEK + E+IAR  
Sbjct: 19  HTCEHIVNRTMVNIFGCGRAVSAHIERKKSKLDFALPKAPSVEDIENIEKTVNEVIARHL 78

Query: 135 PFLKQYLSHEKARELFESKKEAYKVEILESIP--AKENVTLYRQGEWFD-LCRGPHVRST 191
           P   ++++ E+A   F+ K+          +P  A + V + R G++ + LC G HV +T
Sbjct: 79  PVTTEFITQEEAVGRFDLKR----------LPDNASDTVRIVRVGDYDECLCIGLHVTNT 128

Query: 192 GQVKKF 197
            ++  F
Sbjct: 129 SEIGTF 134


>gi|170287982|ref|YP_001738220.1| phosphoribulokinase/uridine kinase [Thermotoga sp. RQ2]
 gi|170175485|gb|ACB08537.1| phosphoribulokinase/uridine kinase [Thermotoga sp. RQ2]
          Length = 555

 Score = 47.4 bits (111), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 41/177 (23%), Positives = 78/177 (44%), Gaps = 5/177 (2%)

Query: 25  DVAESISRSLAKKAVAVAINGKVCDL-SDPVREGSIEIITPEDPRSLAVIRHSCAHIMAE 83
           D+A    +    K +A  +N ++ +L   P R G +E +   DP  L + +     + + 
Sbjct: 25  DIAREYQKYYRYKILAARVNNRIIELFRTPDRSGELEFLDLTDPDGLRIYQRGLVFLASL 84

Query: 84  AVQSIWPEVQVAIGPIIEDGFYYDFDKEQPF---SSDELAQIEKKMQEIIARDSPFLKQY 140
           AV+ +  E ++ +   +  G Y +  K         +++  I+ KM+E++ +D P  K+ 
Sbjct: 85  AVRKLNSEWRLKVLHSLGKGIYCEIYKGNELIVPDQNQVFAIKDKMRELVEKDLPIEKRT 144

Query: 141 LSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
              ++ARE+   K+   K   L     K  V LY    ++    G    STG++  F
Sbjct: 145 FYKDEAREIL-MKEGLVKTVNLFKYRKKRTVKLYHCDGFWAYFYGYLPPSTGRIDVF 200


>gi|312143796|ref|YP_003995242.1| alanyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
 gi|311904447|gb|ADQ14888.1| alanyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
          Length = 877

 Score = 47.4 bits (111), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 34/145 (23%), Positives = 65/145 (44%), Gaps = 10/145 (6%)

Query: 55  REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQP 113
           R  S++ +  +D R      HS  H++ + ++ +  E     G ++  +   +DF     
Sbjct: 545 RGDSVKAVVYDDRRKATARHHSATHLLHKTLKEVLGEHVNQSGSLVAPEKLRFDFTHFSA 604

Query: 114 FSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTL 173
            S  EL +IEK++ + +  + P   +  + E+A+        A   E L      E V +
Sbjct: 605 LSDQELNEIEKRINKAVMENYPVETEEKALEEAK--------AMGAEALFGEKYDEEVRV 656

Query: 174 YRQGEW-FDLCRGPHVRSTGQVKKF 197
            + G++  +LC G HV +TG +  F
Sbjct: 657 VKMGDYSLELCGGTHVDATGDIGPF 681


>gi|309389100|gb|ADO76980.1| alanyl-tRNA synthetase [Halanaerobium praevalens DSM 2228]
          Length = 877

 Score = 47.4 bits (111), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 37/154 (24%), Positives = 72/154 (46%), Gaps = 20/154 (12%)

Query: 54  VREGSIEI------ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYY 106
           V++G IE+      +   + R      HS  H++ +A++ +  E     G ++  D   +
Sbjct: 538 VKKGKIEVGEEVTAVVYHNRREATARHHSATHLLHKALKEVLGEHVNQSGSLVAPDRLRF 597

Query: 107 DFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESK--KEAYKVEILES 164
           DF      SS EL ++E+K+ + I  + P   +  + ++A+++  +    E Y  E    
Sbjct: 598 DFTHFSALSSQELEELERKVNKAIRENYPVETEIKAIDEAKDMGATALFGEKYGQE---- 653

Query: 165 IPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
                 V + + G++  +LC G HVR+TG +  F
Sbjct: 654 ------VRVVKMGDFSLELCGGTHVRATGDIGAF 681


>gi|192292738|ref|YP_001993343.1| alanyl-tRNA synthetase [Rhodopseudomonas palustris TIE-1]
 gi|192286487|gb|ACF02868.1| alanyl-tRNA synthetase [Rhodopseudomonas palustris TIE-1]
          Length = 889

 Score = 47.4 bits (111), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 33/133 (24%), Positives = 63/133 (47%), Gaps = 7/133 (5%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKM 126
           RS     HS  H++ EA++ +  +     G ++  D   +DF  ++P + DEL ++E   
Sbjct: 557 RSAIRANHSATHLLHEALRQVLGDHIAQKGSLVAPDRLRFDFVHQKPITQDELRKVEDIA 616

Query: 127 QEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
            +I+  +   + + ++ + ARE     LF  +K   +V ++    A  +      G   +
Sbjct: 617 NDIVLENDEVVTRLMAVDDAREAGARALF-GEKYGDEVRVVSMGKAARDHGSNVFGWSVE 675

Query: 182 LCRGPHVRSTGQV 194
           LC G HV+ TG +
Sbjct: 676 LCGGTHVKRTGDI 688


>gi|167646774|ref|YP_001684437.1| prolyl-tRNA synthetase [Caulobacter sp. K31]
 gi|189083491|sp|B0SZ28|SYP_CAUSK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|167349204|gb|ABZ71939.1| prolyl-tRNA synthetase [Caulobacter sp. K31]
          Length = 445

 Score = 47.4 bits (111), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 39/183 (21%), Positives = 79/183 (43%), Gaps = 11/183 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I ++ +G+  W   G ++ + +   +R ++ +    E+  P +    LW++SG +D Y  
Sbjct: 32  IRQEAAGIYAWLPLGLRVLKKVERIVREEMDRAGAIELLMPTIQLADLWRESGRYDDYGD 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  +     T +  R     P        +F   +KSY++LP  L      +R+E    
Sbjct: 92  EMLRI-----TDRHKRDLLYGPTAEEVVTDIFRASVKSYKDLPKNLYNIQWKFRDERRPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
             G+MR R F   DA+ F    +   +   ++    ++++   G + + ++  T P   +
Sbjct: 147 F-GVMRGREFLMKDAYSFDLDAEGARKAYNRMFVAYLNLFSRMGLKAVPMRADTGP---I 202

Query: 436 GSD 438
           G D
Sbjct: 203 GGD 205


>gi|313898260|ref|ZP_07831797.1| proline--tRNA ligase [Clostridium sp. HGF2]
 gi|312956642|gb|EFR38273.1| proline--tRNA ligase [Clostridium sp. HGF2]
          Length = 564

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 36/151 (23%), Positives = 73/151 (48%), Gaps = 15/151 (9%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  SG+      G ++ + +   +R ++     +E+  P ++ + ++++SG  +++ +
Sbjct: 32  IKKSSSGIYMIMPMGKRVLKKIEEIVREEMDAAGAQELLMPAMIPEEIYEKSGRREAFGS 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL----KSYRELPVRLAEFGSVYRNE 372
           NMFA+K   D  +  + + L P     H  +F         SY++ P  L +  + +R+E
Sbjct: 92  NMFALK---DRYQ--KNYVLGPT----HEELFTMAAMMKGSSYKDFPYNLYQIQTKFRDE 142

Query: 373 PSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE 403
            +   +GL+RVR F   DA+ F   E    E
Sbjct: 143 -TRPRYGLIRVREFIMKDAYSFDIDEAGLQE 172


>gi|260575893|ref|ZP_05843888.1| prolyl-tRNA synthetase [Rhodobacter sp. SW2]
 gi|259021819|gb|EEW25120.1| prolyl-tRNA synthetase [Rhodobacter sp. SW2]
          Length = 445

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 41/183 (22%), Positives = 77/183 (42%), Gaps = 11/183 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  +G+  W   G+K+ + +   +   + +  +  +  P +    LW++SG +D Y  
Sbjct: 32  IKQQAAGIYSWLPLGFKVLRRIEQIVHEEQQRAGHIPLLMPTLQPADLWRESGRYDDYGE 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  +     T +  R     P N      +F   + SY++LP+ L      +R+E    
Sbjct: 92  EMLRI-----TDRQKRELLYGPTNEEMITDIFRSHVTSYKDLPLTLYHIQWKFRDEMRPR 146

Query: 377 LHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
             G+MR R F   D + F  TKE   +   +     +  Y+  G + I ++  + P   +
Sbjct: 147 F-GVMRGREFLMKDGYNFDLTKEDALHAYNRHLVSYLRTYERMGLQAIPMRADSGP---I 202

Query: 436 GSD 438
           G D
Sbjct: 203 GGD 205


>gi|254511426|ref|ZP_05123493.1| prolyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11]
 gi|221535137|gb|EEE38125.1| prolyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11]
          Length = 456

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 42/183 (22%), Positives = 77/183 (42%), Gaps = 11/183 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  +G+  W   G+K+ + L + +   + +  +  I  P +    LW++SG +D Y  
Sbjct: 42  IKQAAAGIYSWLPLGFKVLRKLENIVHEEQARAGHIAIQMPILQSADLWRESGRYDGYGQ 101

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  +K   D     R     P        +F   + SY++LP+ L +    +R+E    
Sbjct: 102 EMLRMKDRHD-----RDMLFTPTAEELVTDIFRGHVSSYKDLPLTLYQIQWKFRDEIRPR 156

Query: 377 LHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
             G+MR R F   D + F  T E   +   +     +  Y+  G + I ++  + P   +
Sbjct: 157 F-GVMRGREFYMKDGYNFDLTMEDALHAYNRHLVSYLRTYERMGLQAIPMRADSGP---I 212

Query: 436 GSD 438
           G D
Sbjct: 213 GGD 215


>gi|160939113|ref|ZP_02086464.1| hypothetical protein CLOBOL_04007 [Clostridium bolteae ATCC
           BAA-613]
 gi|158438076|gb|EDP15836.1| hypothetical protein CLOBOL_04007 [Clostridium bolteae ATCC
           BAA-613]
          Length = 887

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 36/140 (25%), Positives = 67/140 (47%), Gaps = 11/140 (7%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSDELAQIEKKM 126
           R+L    HS  H++ +A++ +  +     G  ++ G   +DF      + DE+ ++E+ +
Sbjct: 567 RALTCKNHSATHLLQKALRKVLGDHVEQAGSYVDAGRLRFDFTHFSAMTPDEIKKVEELV 626

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRG 185
            + I    P + Q ++ E      E+KK        E    K  V + R G++  +LC G
Sbjct: 627 NQEIQASLPVVTQVMTLE------EAKKTGAMALFGEKYGDK--VRVVRMGDFSTELCGG 678

Query: 186 PHVRSTGQVKKFFKLMKVAG 205
            HV +TG +  +FK++  AG
Sbjct: 679 THVPNTGTI-AYFKIISEAG 697


>gi|50083997|ref|YP_045507.1| prolyl-tRNA synthetase [Acinetobacter sp. ADP1]
 gi|81827514|sp|Q6FE23|SYP_ACIAD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|49529973|emb|CAG67685.1| prolyl-tRNA synthetase [Acinetobacter sp. ADP1]
          Length = 570

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 36/162 (22%), Positives = 68/162 (41%), Gaps = 8/162 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++   + + +R ++ +    E+  P      LW++SG +  Y   +  
Sbjct: 36  ASGLYTWLPMGVRVLNKVEAIVREEMNRSGALEVFMPVTQPASLWEESGRYVQYGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            K   D       F L P +      +  + LKSY++LP+   +  + +R+E      G+
Sbjct: 96  FKDRHDN-----PFVLGPTHEEVITDLARNELKSYKQLPINFYQIQTKFRDEIRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFE 421
           MR R F   DA+ F   +    E    +++    I+   G +
Sbjct: 150 MRSREFIMKDAYSFHVDQASLQETYDNMYDTYCRIFTRLGLD 191


>gi|115523616|ref|YP_780527.1| alanyl-tRNA synthetase [Rhodopseudomonas palustris BisA53]
 gi|115517563|gb|ABJ05547.1| alanyl-tRNA synthetase [Rhodopseudomonas palustris BisA53]
          Length = 893

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 36/153 (23%), Positives = 69/153 (45%), Gaps = 13/153 (8%)

Query: 54  VREGSIEIITP------EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYY 106
           V EG+I++ T        D R      HS  H++ EA++ +  +     G ++  D   +
Sbjct: 539 VEEGTIKLATALALNVDHDRRGAIRANHSATHLLHEALRQVLGDHIAQKGSLVAPDRLRF 598

Query: 107 DFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEI 161
           DF   +P S++EL ++E    E++  +     + ++ + AR+     LF  +K   +V +
Sbjct: 599 DFMHPKPISAEELRRVEDIANEVVLENDEVTTRLMAVDDARDAGARALF-GEKYGDEVRV 657

Query: 162 LESIPAKENVTLYRQGEWFDLCRGPHVRSTGQV 194
           +       +      G   +LC G HV+ TG +
Sbjct: 658 VVMGKGSRDRGANALGWSVELCGGTHVKRTGDI 690


>gi|319944615|ref|ZP_08018883.1| proline--tRNA ligase [Lautropia mirabilis ATCC 51599]
 gi|319742152|gb|EFV94571.1| proline--tRNA ligase [Lautropia mirabilis ATCC 51599]
          Length = 589

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 35/156 (22%), Positives = 70/156 (44%), Gaps = 10/156 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQ 298
           ++E   H+ + R   +  +A    G+  +   G ++ + + + +R ++      E+  P 
Sbjct: 17  DAEVVSHKLMTRAGMIRKLA---GGIYTYMPLGLRVIRRIEAIIREEMDAAGAIELLMPV 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW +SG W+ Y   +  ++      +  R F ++P +      +    L+SYR+L
Sbjct: 74  IQPAELWMESGRWEEYGPELLRIRD-----RHQRDFVIQPTSEEVVTDLARQDLRSYRQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           P       + +R+E      G+MR R FT  DA+ F
Sbjct: 129 PKNFYHIQTKFRDERRPRF-GVMRGREFTMKDAYSF 163


>gi|148273336|ref|YP_001222897.1| prolyl-tRNA synthetase [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|166980116|sp|A5CSZ7|SYP_CLAM3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|147831266|emb|CAN02222.1| proS [Clavibacter michiganensis subsp. michiganensis NCPPB 382]
          Length = 590

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 40/188 (21%), Positives = 81/188 (43%), Gaps = 11/188 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   HR L R     +I     G+  W   G ++   + + +R +++    +E++ P 
Sbjct: 19  DAEVASHRLLVRAG---YIRRQAPGIFAWLPLGLRVKNKVEAIVREEMERIGAQEVHFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L    +Q +G +D Y   MF ++      +      L P +      +      SY++L
Sbjct: 76  LLPAEPYQATGRYDEYGPGMFRLED-----RKRAPMVLAPTHEEFFALLVKDLYSSYKDL 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH-NLIISIYKD 417
           P+ + +    YR+E +    G++R R FT  DA+ F   +       +   +    I++ 
Sbjct: 131 PLSIYQIQDKYRDE-ARPRAGILRGREFTMKDAYSFDHTDAGLAVSYQAQRDAYERIFQR 189

Query: 418 FGFEKIMV 425
            G E ++V
Sbjct: 190 LGLEYVIV 197


>gi|291238092|ref|XP_002738958.1| PREDICTED: threonyl-tRNA synthetase 2, mitochondrial-like
           [Saccoglossus kowalevskii]
          Length = 331

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 42/191 (21%), Positives = 88/191 (46%), Gaps = 18/191 (9%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR---EGSIEIITPEDPRSL-AVIRHS 76
           +T  ++A   ++    ++    +NG++ D+  P+    E ++     +DPR +      S
Sbjct: 75  STPYNIAMHFNKFYRDRSALALVNGELWDMLRPLTDDCEVTLLHFKSDDPREVNKAYWRS 134

Query: 77  CAHIMAEAVQSIWPE------VQVAIGPIIEDGFYYD----FDKEQPFSSDELAQIEKKM 126
           C+H++   + S +        V+V   P+    F YD     D  +P ++ EL  + ++ 
Sbjct: 135 CSHMLGNIIDSAFKNDYFIELVKVPDIPVTAGCFAYDADLKMDSWKP-TTKELMCLGQEG 193

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGP 186
             +  +  PF +  +    A ++F  K   YK + +E    + ++ LYR G++ D+  GP
Sbjct: 194 FRLYEQSLPFERLEVDTSIALQIF--KHNQYKKQQIEEC-GRSSIVLYRCGDFVDISDGP 250

Query: 187 HVRSTGQVKKF 197
            V +TG  + +
Sbjct: 251 MVTNTGFARNY 261


>gi|326318382|ref|YP_004236054.1| prolyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC 19860]
 gi|323375218|gb|ADX47487.1| prolyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC 19860]
          Length = 581

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 31/134 (23%), Positives = 63/134 (47%), Gaps = 7/134 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           G+G+  +   G ++ + + + +R ++ +    E+  P V     WQ++G +D     +  
Sbjct: 36  GAGIYNYMPMGLRVIRKVEAIVREEMNRAGAVEVTMPVVQPAEFWQETGRFDKMGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           ++      +  R F ++P +      +    L+SY++LP  L +  + +R+E      GL
Sbjct: 96  IRD-----RHGRDFVVQPTSEEVVTDIARQELRSYKQLPKNLYQIQTKFRDERRPRF-GL 149

Query: 381 MRVRGFTQDDAHVF 394
           MR R F   DA+ F
Sbjct: 150 MRGREFIMKDAYSF 163


>gi|170782218|ref|YP_001710551.1| prolyl-tRNA synthetase [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|189083492|sp|B0RDZ1|SYP_CLAMS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|169156787|emb|CAQ01950.1| prolyl tRNA synthetase [Clavibacter michiganensis subsp.
           sepedonicus]
          Length = 590

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 40/188 (21%), Positives = 81/188 (43%), Gaps = 11/188 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   HR L R     +I     G+  W   G ++   + + +R +++    +E++ P 
Sbjct: 19  DAEVASHRLLVRAG---YIRRQAPGIFAWLPLGLRVKNKVEAIVREEMERIGAQEVHFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L    +Q +G +D Y   MF ++      +      L P +      +      SY++L
Sbjct: 76  LLPAEPYQATGRYDEYGPGMFRLED-----RKRAPMVLAPTHEEFFALLVKDLYSSYKDL 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH-NLIISIYKD 417
           P+ + +    YR+E +    G++R R FT  DA+ F   +       +   +    I++ 
Sbjct: 131 PLSIYQIQDKYRDE-ARPRAGILRGREFTMKDAYSFDHTDAGLAVSYQAQRDAYERIFQR 189

Query: 418 FGFEKIMV 425
            G E ++V
Sbjct: 190 LGLEYVIV 197


>gi|300870855|ref|YP_003785726.1| alanyl-tRNA synthetase [Brachyspira pilosicoli 95/1000]
 gi|300688554|gb|ADK31225.1| alanyl-tRNA synthetase [Brachyspira pilosicoli 95/1000]
          Length = 864

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 11/142 (7%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQ-SIWPEVQVAIGPIIEDGFYYDFDKEQPFSSD 117
           I++I   D RS     H+  HI+ + ++ ++   +  A   + ED   +DF      + +
Sbjct: 542 IKLIVNFDRRSAIRKNHTATHILQKVLELTLGNHINQAGSFVCEDYLRFDFTHPDSINEE 601

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
            L  IE K+ EI+ +  P + +Y+  E      E+     K    E  P  + V +   G
Sbjct: 602 TLINIENKVNEIVFKSMPAVIKYMPKE------EAIASGAKALFGEKYP--DTVRILDIG 653

Query: 178 EWF--DLCRGPHVRSTGQVKKF 197
           E F  +LC G H+ +T +V  F
Sbjct: 654 EGFSVELCGGSHLTNTSEVGYF 675


>gi|226951685|ref|ZP_03822149.1| prolyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
 gi|294651367|ref|ZP_06728686.1| proline--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
 gi|226837601|gb|EEH69984.1| prolyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
 gi|292822769|gb|EFF81653.1| proline--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
          Length = 571

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 33/147 (22%), Positives = 65/147 (44%), Gaps = 7/147 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E+  P      LW++SG ++ Y   +  
Sbjct: 36  ASGLYSWLPMGTRVLKKVDAIVREEMNRSGALEVFMPVTQPAALWEESGRFEQYGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            K   +       F L P +      +  + LKSY++LP+   +  + +R+E      G+
Sbjct: 96  FKDRHNN-----DFVLGPTHEEVITDLARNELKSYKQLPLNFYQIQTKFRDEIRPRF-GV 149

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKI 407
           MR R F   DA+ F   ++   E   +
Sbjct: 150 MRSREFIMKDAYSFHANQESLQETYDV 176


>gi|205830250|sp|Q07R87|SYA_RHOP5 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
          Length = 891

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 36/153 (23%), Positives = 69/153 (45%), Gaps = 13/153 (8%)

Query: 54  VREGSIEIITP------EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYY 106
           V EG+I++ T        D R      HS  H++ EA++ +  +     G ++  D   +
Sbjct: 537 VEEGTIKLATALALNVDHDRRGAIRANHSATHLLHEALRQVLGDHIAQKGSLVAPDRLRF 596

Query: 107 DFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEI 161
           DF   +P S++EL ++E    E++  +     + ++ + AR+     LF  +K   +V +
Sbjct: 597 DFMHPKPISAEELRRVEDIANEVVLENDEVTTRLMAVDDARDAGARALF-GEKYGDEVRV 655

Query: 162 LESIPAKENVTLYRQGEWFDLCRGPHVRSTGQV 194
           +       +      G   +LC G HV+ TG +
Sbjct: 656 VVMGKGSRDRGANALGWSVELCGGTHVKRTGDI 688


>gi|189183879|ref|YP_001937664.1| alanyl-tRNA synthetase [Orientia tsutsugamushi str. Ikeda]
 gi|205830168|sp|B3CST3|SYA_ORITI RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|189180650|dbj|BAG40430.1| alanyl-tRNA synthetase [Orientia tsutsugamushi str. Ikeda]
          Length = 889

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 67/149 (44%), Gaps = 20/149 (13%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKM 126
           R+   I HS  HI+  A++ I     +  G ++  D   +D       S D L +IE ++
Sbjct: 567 RTQLQIHHSATHILHAALREILGNHIIQKGSLVAYDYLRFDVSHPTSISKDLLTKIENRV 626

Query: 127 QEIIARDS-------PFLKQYLSHEKARELFESK--KEAYKVEILESIPAKENVTLYRQG 177
            EII  ++       PF  Q ++H  A  LFE K   E   + I E+  A+     Y   
Sbjct: 627 NEIILNNTAVKLRIMPF-DQAIAH-GAVALFEEKYGDEVRAISIGETSDAR----YYS-- 678

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGA 206
             F+LC G HV+ TG +  F  L + A A
Sbjct: 679 --FELCGGTHVKYTGDIGAFRILSESAIA 705


>gi|257068210|ref|YP_003154465.1| prolyl-tRNA synthetase [Brachybacterium faecium DSM 4810]
 gi|256559028|gb|ACU84875.1| prolyl-tRNA synthetase, family II [Brachybacterium faecium DSM
           4810]
          Length = 594

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 43/180 (23%), Positives = 80/180 (44%), Gaps = 26/180 (14%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQV 299
           ++E   H+ L R     +I    +GV  W   G K+ + +     + ++++ + I   +V
Sbjct: 18  DAEVASHKLLVRAG---YIRRSAAGVYTWLPLGLKVLRKV----EQIVREEQDAIGGQEV 70

Query: 300 LDQHL-----WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK- 353
           L   L     ++ +G W+ Y  N+F ++   D  +D    A      P H  +F   +K 
Sbjct: 71  LFSALQPREPYEATGRWEDYGPNLFRLQ---DRKQDDYLLA------PTHEEMFTLTVKD 121

Query: 354 ---SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
              SY++LP  L +  + YR+E +    GL+R R F   DA+ F   ++  +   +   L
Sbjct: 122 LFSSYKDLPTMLYQIQAKYRDE-ARPRAGLLRTREFLMKDAYSFDVDDEGLDASYEKQRL 180


>gi|73920761|sp|Q9JKF7|RM39_MOUSE RecName: Full=39S ribosomal protein L39, mitochondrial;
           Short=L39mt; Short=MRP-L39
          Length = 336

 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 85/192 (44%), Gaps = 24/192 (12%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIR---HS 76
           +T    A  +S     K++   ++G+  D+  P+ +   I+ +T +DP    V +    S
Sbjct: 83  STPYSCAMHLSEWYCSKSILALVDGQPWDMYKPLTKSCEIKFLTFKDPDPKEVNKAYWRS 142

Query: 77  CAHIMAEAVQSIWPE------VQVAIGPIIEDGFYYD------FDKEQPFSSDELAQIEK 124
           CA ++   ++  + +      V+    P+I   F YD       D+  P + + L    K
Sbjct: 143 CAMMLGCVIERAFKDDYVVSLVRAPEVPVIAGAFCYDVTLDKRLDEWMP-TKENLRSFTK 201

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN----VTLYRQGEWF 180
               +I RD PF    +    A E+F+  K  YKV+ +E   A +N    V L+R G++ 
Sbjct: 202 DAHALIYRDLPFETLDVDARVALEIFQHNK--YKVDFIEE-KASQNPERIVKLHRIGDFI 258

Query: 181 DLCRGPHVRSTG 192
           D+  GP +  T 
Sbjct: 259 DVSEGPLIPRTS 270


>gi|158423310|ref|YP_001524602.1| prolyl-tRNA synthetase [Azorhizobium caulinodans ORS 571]
 gi|172047938|sp|A8I438|SYP_AZOC5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|158330199|dbj|BAF87684.1| prolyl-tRNA synthetase [Azorhizobium caulinodans ORS 571]
          Length = 440

 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 37/157 (23%), Positives = 67/157 (42%), Gaps = 10/157 (6%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTP 297
           +E++   HR + R      I ++ +G+  W   G ++   + + +R  + +    E+  P
Sbjct: 16  KEADIVSHRLMLRAG---MIRQESAGIYAWLPLGLRVLNKICNIIREEQNRTGAVELLMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW++SG +D Y   M  +K   +     R     P N      +    +KSY+ 
Sbjct: 73  TIQSADLWRESGRYDDYGKEMLRIKDRHE-----RDMLFGPTNEEMITEIVRGSIKSYKS 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           LP+ L      +R+E      G+ R R F   DA+ F
Sbjct: 128 LPLNLYHIQWKFRDEVRPRF-GVYRSREFLMKDAYSF 163


>gi|260949659|ref|XP_002619126.1| hypothetical protein CLUG_00285 [Clavispora lusitaniae ATCC 42720]
 gi|238846698|gb|EEQ36162.1| hypothetical protein CLUG_00285 [Clavispora lusitaniae ATCC 42720]
          Length = 565

 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 39/155 (25%), Positives = 68/155 (43%), Gaps = 14/155 (9%)

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHL 304
           H  LAR   L +++    G++ W   G  +   +   + + ++D   EEI+   +    L
Sbjct: 34  HELLAR---LQYVSPPKPGLVHWMPMGMLVLNKMKQLVHKHMQDAGAEEISLSALSHSDL 90

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA-VFNHGLKSYRELPVRLA 363
           W+Q+G W    A +F +K +         + L P  C   V  +    + SY+ LP+   
Sbjct: 91  WKQTGRWGG--AELFRLKDSKGA-----EYCLAP-TCEEEVTHLVQQNVASYKNLPLLFY 142

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE 398
           +  + +R+E      GL+R R F   DA+ F   E
Sbjct: 143 QINTKFRDEKRPR-SGLLRGREFVMKDAYSFDVSE 176


>gi|228470901|ref|ZP_04055746.1| phosphoribulokinase family protein [Porphyromonas uenonis 60-3]
 gi|228307298|gb|EEK16312.1| phosphoribulokinase family protein [Porphyromonas uenonis 60-3]
          Length = 555

 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 42/196 (21%), Positives = 90/196 (45%), Gaps = 3/196 (1%)

Query: 16  NFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIR 74
           + P  AT   +A+S   +L  + V   +N     L   +RE   +E +   +        
Sbjct: 16  SVPPGATLYQIAQSYRTTLGFEPVNARVNNLTVALDWRLRESCQVEFVGLTEESGRHTYL 75

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQIEKKMQEIIARD 133
            S   + A+A+    P   +++   +  G++      ++  + ++LA +++++  +IA D
Sbjct: 76  RSLCLLFAKALHDELPHYHLSVRHSLSGGYFSVVKCGDKGITEEQLALVKRRIDHLIAAD 135

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQ 193
            PF ++ +  E+A ++F +  E  KV+++ S   +  VT +    + D   G  + STGQ
Sbjct: 136 LPFERRTVPAEEAVQIFTAMGEMDKVDLITS-SGQPYVTYHYLDGYPDNYYGSLLLSTGQ 194

Query: 194 VKKFFKLMKVAGAYWR 209
           V+ +  +  + G   R
Sbjct: 195 VQLYDLVPYLGGVLIR 210


>gi|9105289|gb|AAF83255.1|AE003895_6 prolyl-tRNA synthetase [Xylella fastidiosa 9a5c]
          Length = 582

 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 39/184 (21%), Positives = 76/184 (41%), Gaps = 11/184 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E   HR + R   +  +A   SG+  W   G ++ + + + +R ++ +    E+  P 
Sbjct: 35  DAELVSHRLMLRAGMIRKLA---SGLYTWSPLGLRVLRKVEAIVRDEMNRAGAVEMLLPT 91

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +  + LW++S  W+ +   +  +K      +    +   P             L SY++L
Sbjct: 92  IQPRELWEESERWEKFGNQLLKIKD-----RKQAEYCYSPTAEEAVTDYVRQELTSYKQL 146

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKD 417
           PV L +  + +R+E      G+MR R F   DA+ F      +  E   +      I+  
Sbjct: 147 PVNLYQIQTKFRDEIRPRF-GVMRAREFVMKDAYSFHLNDADLVREYENMRATYTRIFTR 205

Query: 418 FGFE 421
            G E
Sbjct: 206 LGLE 209


>gi|77747502|ref|NP_297735.2| prolyl-tRNA synthetase [Xylella fastidiosa 9a5c]
 gi|114152281|sp|Q9PG57|SYP_XYLFA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
          Length = 564

 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 39/184 (21%), Positives = 76/184 (41%), Gaps = 11/184 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E   HR + R   +  +A   SG+  W   G ++ + + + +R ++ +    E+  P 
Sbjct: 17  DAELVSHRLMLRAGMIRKLA---SGLYTWSPLGLRVLRKVEAIVRDEMNRAGAVEMLLPT 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +  + LW++S  W+ +   +  +K      +    +   P             L SY++L
Sbjct: 74  IQPRELWEESERWEKFGNQLLKIKD-----RKQAEYCYSPTAEEAVTDYVRQELTSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKD 417
           PV L +  + +R+E      G+MR R F   DA+ F      +  E   +      I+  
Sbjct: 129 PVNLYQIQTKFRDEIRPRF-GVMRAREFVMKDAYSFHLNDADLVREYENMRATYTRIFTR 187

Query: 418 FGFE 421
            G E
Sbjct: 188 LGLE 191


>gi|194389892|dbj|BAG60462.1| unnamed protein product [Homo sapiens]
          Length = 476

 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 68/306 (22%), Positives = 119/306 (38%), Gaps = 55/306 (17%)

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH-V 393
           A++P +       +   ++S+R+LP++L ++ +V R E        +R R F   + H  
Sbjct: 81  AIRPTSETVMYPAYAKWVQSHRDLPIKLNQWCNVVRWEFKHP-QPFLRTREFLWQEGHSA 139

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
           F T E+   E L+I +L   +Y++     ++    T  EK  G D             ++
Sbjct: 140 FATMEEAAEEVLQILDLYAQVYEELLAIPVVKGRKTEKEKFAGGD---------YTTTIE 190

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS 513
              ++S   I  G     G  +   FE + +D                +P      Y NS
Sbjct: 191 AFISASGRAIQGGTSHHLGQNFSKMFEIVFEDP--------------KIPGEKQFAYQNS 236

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTT------ITSSAVEY 567
                         +G   R IG+M      N+ L L P  A V        IT++  E 
Sbjct: 237 --------------WGLTTRTIGVMTMVHGDNMGLVLPPRVACVQVVIIPCGITNALSEE 282

Query: 568 AQE--IANL------LKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEA-SER 617
            +E  IA        L S ++ +  D R N + ++K     +K +PI +  G ++  S +
Sbjct: 283 DKEALIAKCNDYRRRLLSVNIRVRADLRDNYSPDWKFNHWELKGVPIRLEVGPRDMKSCQ 342

Query: 618 SIGIRR 623
            + +RR
Sbjct: 343 FVAVRR 348


>gi|148256734|ref|YP_001241319.1| alanyl-tRNA synthetase [Bradyrhizobium sp. BTAi1]
 gi|205829994|sp|A5EML9|SYA_BRASB RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|146408907|gb|ABQ37413.1| alanyl-tRNA synthetase [Bradyrhizobium sp. BTAi1]
          Length = 896

 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 65/138 (47%), Gaps = 12/138 (8%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKM 126
           RS     HS  HI+ EA++ +  +     G ++  D   +DF   +P S++ELA++E   
Sbjct: 557 RSAIRANHSATHILHEALRQVLGDHIAQRGSLVSPDRLRFDFAHPKPISAEELARVEDIA 616

Query: 127 QEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGE--- 178
            +++  ++    + ++ + ARE     LF  +K   +V ++    A  +     Q     
Sbjct: 617 NDVVLENAEVTTRLMALDDAREAGARALF-GEKYGDEVRVVSMGNAARDQASNAQASNAM 675

Query: 179 -W-FDLCRGPHVRSTGQV 194
            W  +LC G HV+ TG +
Sbjct: 676 GWSVELCGGTHVKRTGDI 693


>gi|260771311|ref|ZP_05880237.1| prolyl-tRNA synthetase [Vibrio furnissii CIP 102972]
 gi|260613627|gb|EEX38820.1| prolyl-tRNA synthetase [Vibrio furnissii CIP 102972]
          Length = 541

 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 67/139 (48%), Gaps = 9/139 (6%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINT--PQVLDQHLWQQSGHWDSYRANMFA 320
           SG+  W   G ++ + + + +R++I D    I T  P V    LW+++G     R+    
Sbjct: 7   SGLYTWLPTGLRVLRKVENIVRQEI-DRAGAIETLMPVVQPFELWEETG-----RSEKMG 60

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +    T + +R F L P       A+  + + SY++LP+ L +  + +R+E      G+
Sbjct: 61  PELLRFTDRHVRPFVLSPTAEEVITALVRNEVSSYKQLPLNLYQIQTKFRDERRPRF-GV 119

Query: 381 MRVRGFTQDDAHVFCTKEQ 399
           MR R F+  DA+ F   +Q
Sbjct: 120 MRAREFSMMDAYSFDLDKQ 138


>gi|195129623|ref|XP_002009255.1| GI13938 [Drosophila mojavensis]
 gi|193920864|gb|EDW19731.1| GI13938 [Drosophila mojavensis]
          Length = 332

 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 62/258 (24%), Positives = 113/258 (43%), Gaps = 32/258 (12%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVC-DLSDPVREG-S 58
           +P D+ L   +     F       + A+ +S    K++    I+G V  D+  P++E  +
Sbjct: 64  LPEDVTLVMNNNISTPF-------NCAQHLSEGHCKRSALALIDGSVPWDMHRPLQESCT 116

Query: 59  IEIIT--PEDPRSL-AVIRHSCAHIMAEAVQSIWP-EVQVAI----GPIIEDG-FYYDF- 108
           ++++     DP  +      +C+ ++  A+Q ++  E  + +    GP I+ G F +D  
Sbjct: 117 LQLLNFNVSDPHLVNKAFWRTCSFMLGAALQRVFKQEANLQLHSFPGPNIKSGSFVHDIV 176

Query: 109 ---DKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESI 165
                 +P +  E+  I  +M ++ A+D    +  +  + A E+F+  +  YK E + SI
Sbjct: 177 LGVQNWEP-TKAEMRAISAEMVKLAAQDLCIERLEVDLDLATEMFKDLR--YKSEQIPSI 233

Query: 166 PAKEN--VTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAY-WRGDSNRPMLSRIYG 222
             +    VTLYR G+  D+ RGP V ST    +F     V  A+    +       R+ G
Sbjct: 234 AQQHQNRVTLYRLGDHIDISRGPMVAST----RFLGKCTVLAAHKLANEGASDAFYRVQG 289

Query: 223 TAWNTQQELTQYLYFLEE 240
            A      L  + Y L E
Sbjct: 290 VALPAGFALNHFAYGLLE 307


>gi|297613111|ref|NP_001066707.2| Os12g0443700 [Oryza sativa Japonica Group]
 gi|77554943|gb|ABA97739.1| Bifunctional aminoacyl-tRNA synthetase, putative, expressed [Oryza
           sativa Japonica Group]
 gi|215697485|dbj|BAG91479.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215740854|dbj|BAG97010.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|218186797|gb|EEC69224.1| hypothetical protein OsI_38226 [Oryza sativa Indica Group]
 gi|222617028|gb|EEE53160.1| hypothetical protein OsJ_35987 [Oryza sativa Japonica Group]
 gi|255670276|dbj|BAF29726.2| Os12g0443700 [Oryza sativa Japonica Group]
          Length = 510

 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 68/303 (22%), Positives = 124/303 (40%), Gaps = 55/303 (18%)

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV- 393
           A++P +       F+  ++S+R+LP+R  ++ +V R E S      +R R F   + H  
Sbjct: 130 AIRPTSETVMYPYFSKWIRSHRDLPLRCNQWCNVVRWEFSNPTP-FIRSREFLWQEGHTA 188

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
           F TKE+   E L+I  L   IY++F    + V +S                    KG   
Sbjct: 189 FATKEEADEEVLQILELYRRIYEEF----LAVPVS--------------------KG--- 221

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVN 512
             + S  ++         G  Y    E  + +  GR  Q  T   +  N    F+  + N
Sbjct: 222 --RKSEMEKF-------AGGLYTTSVEAFIPNT-GRGVQGATSHCLGQNFAKMFDITFEN 271

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTI------TS 562
               +    M+ +  +    R IG+M+     +    LP  ++P+Q IV  +      T+
Sbjct: 272 DKGSRS---MVWQNSWAYTTRSIGVMVMTHGDDKGLVLPPRVAPLQVIVIPVPYKDVDTT 328

Query: 563 SAVEYAQEIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKE-ASERSIG 620
           + V   ++    L+   +  + D R N +  +K     +K +P+ I  G K+ A+ ++  
Sbjct: 329 AIVNECKKTVETLEKAGIRADLDTRENYSPGWKYSHWEMKGVPLRIEIGPKDMANNQARV 388

Query: 621 IRR 623
           +RR
Sbjct: 389 VRR 391


>gi|330445168|ref|ZP_08308820.1| prolyl-tRNA synthetase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328489359|dbj|GAA03317.1| prolyl-tRNA synthetase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 571

 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 40/163 (24%), Positives = 73/163 (44%), Gaps = 10/163 (6%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINT--PQVLDQHLWQQSGHWDSYRANMF 319
            SG+  W   G ++ + + + +R++I D+   I T  P V    LW+++G     R+   
Sbjct: 36  ASGLYTWLPTGLRVLRKVENIVRQEI-DNAGAIETLMPVVQPFELWEETG-----RSEKM 89

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHG 379
             +    T +  R F L P       ++  + + SY++LP+ L +  + +R+E      G
Sbjct: 90  GPELLRFTDRHTRPFVLSPTAEEVITSLVRNEVSSYKQLPLNLYQIQTKFRDERRPRF-G 148

Query: 380 LMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFE 421
           +MR R F   DA+ F   KE +      +H+     +   G E
Sbjct: 149 VMRAREFCMMDAYSFDIDKEGLQKSYDAMHDAYCKAFDRMGLE 191


>gi|123959750|ref|NP_001074199.1| 39S ribosomal protein L39, mitochondrial [Bos taurus]
 gi|115545416|gb|AAI22668.1| Mitochondrial ribosomal protein L39 [Bos taurus]
 gi|296491627|gb|DAA33660.1| mitochondrial ribosomal protein L39 [Bos taurus]
          Length = 335

 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 87/192 (45%), Gaps = 24/192 (12%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIR---HS 76
           +T    A  +S    +K++   ++G+  D+  P+ +   I+ +T +D     V +    S
Sbjct: 83  STPYSCAMHLSEWYCRKSILALVDGQPWDMYKPLTKSCEIKFLTFKDDDPGEVNKAYWRS 142

Query: 77  CAHIMAEAVQSIWPE------VQVAIGPIIEDGFYYD------FDKEQPFSSDELAQIEK 124
           CA IM   ++  + E      V+    P+I   F YD       D+  P + + L    K
Sbjct: 143 CAMIMGCVIERAFKEEYVVHLVRAPEVPVIAGAFCYDVVLDKRLDEWMP-TKENLRSFTK 201

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN----VTLYRQGEWF 180
             + +I +D PF    +  + A E+F+  K  YKV+ +E   A +N    V L+R G++ 
Sbjct: 202 DARALIYKDLPFETLEVEAKVALEIFQHNK--YKVDFIEE-KASQNPERIVKLHRFGDFI 258

Query: 181 DLCRGPHVRSTG 192
           D+  GP +  T 
Sbjct: 259 DVSEGPLIPRTS 270


>gi|289741267|gb|ADD19381.1| mitochondrial ribosomal protein L39 [Glossina morsitans morsitans]
          Length = 329

 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 54/221 (24%), Positives = 102/221 (46%), Gaps = 23/221 (10%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVC-DLSDPVREG-SIEII--TPEDPRSL-AVIRH 75
           +T  + A+ +S    K++V   ++G V  D+  P++   +++++  T  DP  +      
Sbjct: 75  STPYNCAQHLSEGHCKRSVLSLVDGNVPWDMHRPLQASCTLQLLHFTVSDPHVVNKTFWR 134

Query: 76  SCAHIMAEAVQSIWPE-----VQVAIGPIIEDG-FYYDF---DKEQPFSSDELAQIEKKM 126
           SC+ ++  A+Q+ + E     +    GP I+ G F +D     ++   +  EL  +  +M
Sbjct: 135 SCSFMLGAALQNAFKEEAHLQLHSFPGPNIKTGSFIHDIVLGSRDWQPTKSELRALSAEM 194

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKE--NVTLYRQGEWFDLCR 184
            ++ A+D  F +  ++ E A E+F+  +  YK E L SI  +    + LYR G   D+ +
Sbjct: 195 LKLAAQDLKFERLEVNQELALEMFKDCR--YKKEQLPSISQQNRGRIVLYRMGTHIDISK 252

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGD-SNRPMLSRIYGTA 224
           GP +       +F     VA  +   D      L R+ G A
Sbjct: 253 GPMI----SFSRFVGRCTVAAIHKLADEGEHDALYRVQGIA 289


>gi|262276504|ref|ZP_06054313.1| prolyl-tRNA synthetase [Grimontia hollisae CIP 101886]
 gi|262220312|gb|EEY71628.1| prolyl-tRNA synthetase [Grimontia hollisae CIP 101886]
          Length = 571

 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 38/161 (23%), Positives = 72/161 (44%), Gaps = 8/161 (4%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG+  W   G ++ Q + + +R++I +    E   P V    LW+++G     R+     
Sbjct: 37  SGLYTWLPTGLRVLQKVENIVRQEINNAGAIETLMPVVQPFELWEETG-----RSEKMGP 91

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           +    T +  R F L P       ++  + + SY++LP+ L +  + +R+E      G+M
Sbjct: 92  ELLRFTDRHERPFVLSPTAEEVITSLVRNEVNSYKQLPLNLYQIQTKFRDEVRPRF-GVM 150

Query: 382 RVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFE 421
           R R F+  DA+ F   KE +      +H    + +   G +
Sbjct: 151 RAREFSMMDAYSFDLDKEGLQKSYEAMHTAYCAAFDRMGLD 191


>gi|240137564|ref|YP_002962035.1| proline-tRNA ligase [Methylobacterium extorquens AM1]
 gi|240007532|gb|ACS38758.1| proline-tRNA ligase [Methylobacterium extorquens AM1]
          Length = 442

 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 47/212 (22%), Positives = 84/212 (39%), Gaps = 21/212 (9%)

Query: 236 YFL-------EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKI 287
           YFL       +E+E   HR + R      I ++ +G+  W   G ++   +   +R  + 
Sbjct: 7   YFLPILRETPKEAEIVSHRLMLRAG---MIRQEAAGIYAWLPLGLRVLNKVCDVVRAEQD 63

Query: 288 KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
           +    EI  P +    LW++SG +++Y   M  +K   +     R     P        +
Sbjct: 64  RAGAIEILMPTIQAADLWRESGRYEAYGKEMLRLKDRHE-----RELLYGPTAEEVVTEI 118

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-K 406
           F    +SY++LP  L +    +R+E      G MR R F   D + F   +        K
Sbjct: 119 FRASTRSYKDLPKNLYQISWKFRDEVRPRF-GTMRSREFLMKDGYSFDIDQAAARHSYNK 177

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD 438
           +    +  ++  G   I ++  T P   +G D
Sbjct: 178 VFVSYLRTFERLGLRAIPMRADTGP---IGGD 206


>gi|315180910|gb|ADT87824.1| prolyl-tRNA synthetase [Vibrio furnissii NCTC 11218]
          Length = 546

 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 67/139 (48%), Gaps = 9/139 (6%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINT--PQVLDQHLWQQSGHWDSYRANMFA 320
           SG+  W   G ++ + + + +R++I D    I T  P V    LW+++G     R+    
Sbjct: 12  SGLYTWLPTGLRVLRKVENIVRQEI-DRAGAIETLMPVVQPFELWEETG-----RSEKMG 65

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +    T + +R F L P       A+  + + SY++LP+ L +  + +R+E      G+
Sbjct: 66  PELLRFTDRHVRPFVLSPTAEEVITALVRNEVSSYKQLPLNLYQIQTKFRDERRPRF-GV 124

Query: 381 MRVRGFTQDDAHVFCTKEQ 399
           MR R F+  DA+ F   +Q
Sbjct: 125 MRAREFSMMDAYSFDLDKQ 143


>gi|254560035|ref|YP_003067130.1| proline-tRNA ligase [Methylobacterium extorquens DM4]
 gi|254267313|emb|CAX23145.1| proline-tRNA ligase [Methylobacterium extorquens DM4]
          Length = 442

 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 47/212 (22%), Positives = 84/212 (39%), Gaps = 21/212 (9%)

Query: 236 YFL-------EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKI 287
           YFL       +E+E   HR + R      I ++ +G+  W   G ++   +   +R  + 
Sbjct: 7   YFLPILRETPKEAEIVSHRLMLRAG---MIRQEAAGIYAWLPLGLRVLNKVCDVVRAEQD 63

Query: 288 KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
           +    EI  P +    LW++SG +++Y   M  +K   +     R     P        +
Sbjct: 64  RAGAIEILMPTIQAADLWRESGRYEAYGKEMLRLKDRHE-----RELLYGPTAEEVVTEI 118

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-K 406
           F    +SY++LP  L +    +R+E      G MR R F   D + F   +        K
Sbjct: 119 FRASTRSYKDLPKNLYQISWKFRDEVRPRF-GTMRSREFLMKDGYSFDIDQAAARHSYNK 177

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD 438
           +    +  ++  G   I ++  T P   +G D
Sbjct: 178 VFVSYLRTFERLGLRAIPMRADTGP---IGGD 206


>gi|254508639|ref|ZP_05120754.1| prolyl-tRNA synthetase [Vibrio parahaemolyticus 16]
 gi|219548396|gb|EED25406.1| prolyl-tRNA synthetase [Vibrio parahaemolyticus 16]
          Length = 571

 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 39/162 (24%), Positives = 73/162 (45%), Gaps = 10/162 (6%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINT--PQVLDQHLWQQSGHWDSYRANMFA 320
           SG+  W   G ++ + + + +R++I D+   + T  P V    LW+++G     R+    
Sbjct: 37  SGLYTWLPTGLRVLRKVENIVRQEI-DNAGAVETLMPVVQPFELWEETG-----RSEKMG 90

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +    T +  R F L P       ++  + + SY++LP+ L +  + +R+E      G+
Sbjct: 91  PELLRFTDRHTRPFVLSPTAEEVITSLVRNEVSSYKQLPLNLYQIQTKFRDERRPRF-GV 149

Query: 381 MRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFE 421
           MR R F   DA+ F   KE +      +H+     +   G E
Sbjct: 150 MRAREFCMMDAYSFDIDKEGLEKSYQAMHDAYCKAFDRMGLE 191


>gi|242010725|ref|XP_002426109.1| prolyl-tRNA synthetase, putative [Pediculus humanus corporis]
 gi|212510156|gb|EEB13371.1| prolyl-tRNA synthetase, putative [Pediculus humanus corporis]
          Length = 1305

 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 71/323 (21%), Positives = 122/323 (37%), Gaps = 59/323 (18%)

Query: 335  ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV- 393
            A++P +       F+  ++SYR+LP++L ++ +V R E        +R R F   + H  
Sbjct: 909  AIRPTSETVMYPAFSKWVQSYRDLPIKLNQWNNVVRWEFKHP-QPFLRTREFLWQEGHTA 967

Query: 394  FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
            F + +    E  +I +L   +Y D     ++    T+ EK  GSD               
Sbjct: 968  FASYKDAETEVYQILDLYARVYTDLLAIPVVKGWKTKKEKFAGSD--------------- 1012

Query: 454  TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVN 512
                       T V     AF           A GR  Q  T   +  N    FN  Y +
Sbjct: 1013 ---------FTTTV----EAFIP---------ASGRGIQAATSHHLGQNFSKMFNIVYED 1050

Query: 513  SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTTITSSAVEYA 568
              +++     +++  +G   R IGIMI     N  L L P     Q ++     +A    
Sbjct: 1051 PETQEKK--FVYQNSWGITTRSIGIMIMVHADNKGLVLPPEASSYQLVIVPCGITASLKE 1108

Query: 569  QEIANLLKSHHLSIETDFRNETINYKIREHS------------IKKIPIIIICGDKEASE 616
            +E  NLL +   ++E DF N  I  K+ +              +K +P+ +  G  +  +
Sbjct: 1109 EEKKNLLNACK-NLEKDFINSGIRVKLDDRDNYSPGWKFNHWELKGVPLRVELGPTDLEK 1167

Query: 617  RSIGIRRFGSTTTQKVSLLDAIP 639
              +   R  +    ++ L + IP
Sbjct: 1168 GQLTAVRRDTGEKIQIQLTNKIP 1190


>gi|57242133|ref|ZP_00370073.1| prolyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
 gi|57017325|gb|EAL54106.1| prolyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
          Length = 568

 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 35/150 (23%), Positives = 67/150 (44%), Gaps = 21/150 (14%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHL--------WQQSG 309
           I ++GSG+  +   G  ++  + + ++       EE++    L+  L        WQ+SG
Sbjct: 32  IEQNGSGLYNFLPLGKMVYSKIENIIK-------EEMDKAGALETSLSFTTPASFWQESG 84

Query: 310 HWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVY 369
            ++ +   +   K   +       F L P +    + V  + + SY++LP+ L + G  +
Sbjct: 85  RYNVFGKELLRFKDRKEN-----DFVLGPTHEEAMLNVVKNKITSYKQLPLNLYQIGLKF 139

Query: 370 RNEPSGSLHGLMRVRGFTQDDAHVFCTKEQ 399
           R+E      GL+R R F   DA+ F   E+
Sbjct: 140 RDEARPRF-GLLRCREFVMKDAYSFHKDEE 168


>gi|332974215|gb|EGK11148.1| proline--tRNA ligase [Kingella kingae ATCC 23330]
          Length = 570

 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 36/161 (22%), Positives = 67/161 (41%), Gaps = 15/161 (9%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I  + SG+  W   G ++ + + + +R ++ +    E+  P V    LW++SG WD Y  
Sbjct: 32  IKANASGLYTWMPMGLRVLRKVEAIVREEMNRAGAIELLMPVVQPADLWKESGRWDFYGD 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            +  +     T +    F   P        +    + SY++LP       + +R+E    
Sbjct: 92  ELLRI-----TDRHENPFCFSPTCEEMITDIVRKEVNSYKQLPKNFYHINTKFRDERRPR 146

Query: 377 LHGLMRVRGFTQDDAHVFC--------TKEQMFNECLKIHN 409
             G+MR R F   DA+ F         T + M++   ++ N
Sbjct: 147 F-GVMRAREFVMKDAYSFHADFDSLKETYQNMYDAYCRVFN 186


>gi|126463194|ref|YP_001044308.1| prolyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029]
 gi|221640237|ref|YP_002526499.1| prolyl-tRNA synthetase [Rhodobacter sphaeroides KD131]
 gi|166980147|sp|A3PMH0|SYP_RHOS1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|254782913|sp|B9KLX3|SYP_RHOSK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|126104858|gb|ABN77536.1| prolyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029]
 gi|221161018|gb|ACM01998.1| Prolyl-tRNA synthetase [Rhodobacter sphaeroides KD131]
          Length = 445

 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 40/183 (21%), Positives = 77/183 (42%), Gaps = 11/183 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  +G+  W   G+K+ + +   +   +I+  +  +  P +    LW++SG +D Y  
Sbjct: 32  IKQQAAGIYSWLPLGFKVLKRIEQIVHEEQIRAGHIPLLMPTLQPADLWRESGRYDDYGE 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  +     T +  R     P N      +F   + SY++LP+ L      +R+E    
Sbjct: 92  EMLRI-----TDRHKRDMLYGPTNEEMITDIFRSHVSSYKDLPLTLYHIQWKFRDEIRPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL-IISIYKDFGFEKIMVKLSTRPEKRV 435
             G+MR R F   D + F    +        H +  +  Y+  G + I ++ ++ P   +
Sbjct: 147 F-GVMRGREFLMKDGYNFDLDYESAIHAYNRHMVSYLRTYERMGLQAIPMRAASGP---I 202

Query: 436 GSD 438
           G D
Sbjct: 203 GGD 205


>gi|163850499|ref|YP_001638542.1| prolyl-tRNA synthetase [Methylobacterium extorquens PA1]
 gi|226701309|sp|A9W1L5|SYP_METEP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|163662104|gb|ABY29471.1| prolyl-tRNA synthetase [Methylobacterium extorquens PA1]
          Length = 441

 Score = 47.0 bits (110), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 47/212 (22%), Positives = 84/212 (39%), Gaps = 21/212 (9%)

Query: 236 YFL-------EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKI 287
           YFL       +E+E   HR + R      I ++ +G+  W   G ++   +   +R  + 
Sbjct: 6   YFLPILRETPKEAEIVSHRLMLRAG---MIRQEAAGIYAWLPLGLRVLNKVCDVVRAEQD 62

Query: 288 KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
           +    EI  P +    LW++SG +++Y   M  +K   +     R     P        +
Sbjct: 63  RAGAIEILMPTIQAADLWRESGRYEAYGKEMLRLKDRHE-----RELLYGPTAEEVVTEI 117

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-K 406
           F    +SY++LP  L +    +R+E      G MR R F   D + F   +        K
Sbjct: 118 FRASTRSYKDLPKNLYQISWKFRDEVRPRF-GTMRSREFLMKDGYSFDIDQAAARHSYNK 176

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD 438
           +    +  ++  G   I ++  T P   +G D
Sbjct: 177 VFVSYLRTFERLGLRAIPMRADTGP---IGGD 205


>gi|332559243|ref|ZP_08413565.1| prolyl-tRNA synthetase [Rhodobacter sphaeroides WS8N]
 gi|332276955|gb|EGJ22270.1| prolyl-tRNA synthetase [Rhodobacter sphaeroides WS8N]
          Length = 445

 Score = 47.0 bits (110), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 40/183 (21%), Positives = 77/183 (42%), Gaps = 11/183 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  +G+  W   G+K+ + +   +   +I+  +  +  P +    LW++SG +D Y  
Sbjct: 32  IKQQAAGIYSWLPLGFKVLKRIEQIVHEEQIRAGHIPLLMPTLQPADLWRESGRYDDYGE 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  +     T +  R     P N      +F   + SY++LP+ L      +R+E    
Sbjct: 92  EMLRI-----TDRHKRDMLYGPTNEEMITDIFRSHVSSYKDLPLTLYHIQWKFRDEIRPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL-IISIYKDFGFEKIMVKLSTRPEKRV 435
             G+MR R F   D + F    +        H +  +  Y+  G + I ++ ++ P   +
Sbjct: 147 F-GVMRGREFLMKDGYNFDLDYESAIHAYNRHMVSYLRTYERMGLQAIPMRAASGP---I 202

Query: 436 GSD 438
           G D
Sbjct: 203 GGD 205


>gi|114569925|ref|YP_756605.1| prolyl-tRNA synthetase [Maricaulis maris MCS10]
 gi|122316107|sp|Q0APX0|SYP_MARMM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|114340387|gb|ABI65667.1| prolyl-tRNA synthetase [Maricaulis maris MCS10]
          Length = 444

 Score = 47.0 bits (110), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 40/183 (21%), Positives = 76/183 (41%), Gaps = 11/183 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I ++ +G+  W   G ++ + +   +R  + +    E+  P +    LW++SG +D Y  
Sbjct: 32  IKQEAAGIYAWLPLGHRVLRKIEQIVREEQDRAGAVELLMPTIQSADLWRESGRYDDYGD 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  +     T +  R     P N      +F    KSY+++P  L      +R+E    
Sbjct: 92  EMLRI-----TDRHDRDMLFGPTNEEMITDIFRSYCKSYKDVPKLLYHIQWKFRDERRPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
             G+MR R F   DA+ F   E        ++    ++ +   G + + ++  T P   +
Sbjct: 147 F-GVMRGREFLMKDAYSFDVDEAAARRSYNRMFVAYLNTFARLGLKAVPMQADTGP---I 202

Query: 436 GSD 438
           G D
Sbjct: 203 GGD 205


>gi|169244471|gb|ACA50509.1| aminoacyl-tRNA synthase [Oryza sativa Japonica Group]
          Length = 510

 Score = 47.0 bits (110), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 68/303 (22%), Positives = 124/303 (40%), Gaps = 55/303 (18%)

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV- 393
           A++P +       F+  ++S+R+LP+R  ++ +V R E S      +R R F   + H  
Sbjct: 130 AIRPTSETVMYPYFSKWIRSHRDLPLRCNQWCNVVRWEFSNPTP-FIRSREFLWQEGHTA 188

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
           F TKE+   E L+I  L   IY++F    + V +S                    KG   
Sbjct: 189 FATKEEADEEVLQILELYRRIYEEF----LAVPVS--------------------KG--- 221

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVN 512
             + S  ++         G  Y    E  + +  GR  Q  T   +  N    F+  + N
Sbjct: 222 --RKSEMEKF-------AGGLYTTSVEAFIPNT-GRGVQGATSHCLGQNFAKMFDITFEN 271

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTI------TS 562
               +    M+ +  +    R IG+M+     +    LP  ++P+Q IV  +      T+
Sbjct: 272 DKGSRS---MVWQNSWAYTTRSIGVMVMTHGDDKGLVLPPRVAPLQVIVIPVPYKDVDTT 328

Query: 563 SAVEYAQEIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKE-ASERSIG 620
           + V   ++    L+   +  + D R N +  +K     +K +P+ I  G K+ A+ ++  
Sbjct: 329 AIVNECKKTVETLEKAGIRADLDTRANYSPGWKYSHWEMKGVPLRIEIGPKDMANNQARV 388

Query: 621 IRR 623
           +RR
Sbjct: 389 VRR 391


>gi|189189606|ref|XP_001931142.1| prolyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187972748|gb|EDU40247.1| prolyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 488

 Score = 47.0 bits (110), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 53/106 (50%), Gaps = 15/106 (14%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT--FALKPMNCPGHVAVFNH 350
           +++   +  + LW+QSG    Y AN   ++     IKD R   F L P +     A+   
Sbjct: 28  KVSLSSITTEALWRQSGR---YSANSELLR-----IKDRRETGFLLSPTHEEEITALVAS 79

Query: 351 GLKSYRELPVRLAEFGSVYRNE--PSGSLHGLMRVRGFTQDDAHVF 394
            + SY++LP+RL + G  YR+E  P G   GL+R + F   D + F
Sbjct: 80  MVHSYKDLPLRLYQIGRKYRDERRPRG---GLLRAKEFMMKDLYTF 122


>gi|77464352|ref|YP_353856.1| prolyl-tRNA synthetase [Rhodobacter sphaeroides 2.4.1]
 gi|114152244|sp|Q3IZS9|SYP_RHOS4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|77388770|gb|ABA79955.1| Prolyl-tRNA synthetase, class IIa [Rhodobacter sphaeroides 2.4.1]
          Length = 445

 Score = 47.0 bits (110), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 40/183 (21%), Positives = 77/183 (42%), Gaps = 11/183 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  +G+  W   G+K+ + +   +   +I+  +  +  P +    LW++SG +D Y  
Sbjct: 32  IKQQAAGIYSWLPLGFKVLKRIEQIVHEEQIRAGHIPLLMPTLQPADLWRESGRYDDYGE 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  +     T +  R     P N      +F   + SY++LP+ L      +R+E    
Sbjct: 92  EMLRI-----TDRHKRDMLYGPTNEEMITDIFRSHVSSYKDLPLTLYHIQWKFRDEIRPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL-IISIYKDFGFEKIMVKLSTRPEKRV 435
             G+MR R F   D + F    +        H +  +  Y+  G + I ++ ++ P   +
Sbjct: 147 F-GVMRGREFLMKDGYNFDLDYESAIHAYNRHMVSYLRTYERMGLQAIPMRAASGP---I 202

Query: 436 GSD 438
           G D
Sbjct: 203 GGD 205


>gi|183602502|ref|ZP_02963867.1| prolyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           HN019]
 gi|219683545|ref|YP_002469928.1| prolyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           AD011]
 gi|254782886|sp|B8DTM3|SYP_BIFA0 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|183218143|gb|EDT88789.1| prolyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           HN019]
 gi|219621195|gb|ACL29352.1| prolyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           AD011]
          Length = 599

 Score = 47.0 bits (110), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 11/151 (7%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
           +I +   G+  W   G  +   +   +R +I     +E++ P +L +  ++ +  W+ Y 
Sbjct: 29  YIRKAAPGIWTWLPLGLAVLNKIEDVIREEINGIGAQEVHFPALLPREPYEATHRWEEYG 88

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE--P 373
            N+F +K   +       + L P +      +      SY++LPV L +  + YR+E  P
Sbjct: 89  DNIFRLKDRHEA-----DYLLAPTHEEMFTLLVKDMYSSYKDLPVTLYQIQTKYRDEFRP 143

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
                GL+R R F   DA+ F   E+   + 
Sbjct: 144 RA---GLIRGREFIMKDAYSFTVDEEGMRQA 171


>gi|148665896|gb|EDK98312.1| mitochondrial ribosomal protein L39 [Mus musculus]
 gi|151357466|emb|CAO78080.1| mitochondrial ribosomal protein L39 [Mus musculus]
          Length = 336

 Score = 47.0 bits (110), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 57/245 (23%), Positives = 106/245 (43%), Gaps = 30/245 (12%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIR---HS 76
           +T    A  +S     K++   ++G+  D+  P+ +   I+ +T +DP    V +    S
Sbjct: 83  STPYSCAMHLSEWYCSKSILALVDGQPWDMYKPLTKSCEIKFLTFKDPDPKEVNKAYWRS 142

Query: 77  CAHIMAEAVQSIWPE------VQVAIGPIIEDGFYYD------FDKEQPFSSDELAQIEK 124
           CA ++   ++  + +      V+    P+I   F YD       D+  P + + L    K
Sbjct: 143 CAMMLGCVIERAFKDDYVVSLVRAPEVPVIAGAFCYDVTLDKRLDEWMP-TKENLRSFTK 201

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN----VTLYRQGEWF 180
               +I RD PF    +    A E+F+  K  YKV+ +E   A +N    V L+R G++ 
Sbjct: 202 DAHALIYRDLPFETLDVDARVALEIFQHNK--YKVDFIEE-KASQNPERIVKLHRIGDFI 258

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNT--QQELTQYLYFL 238
           D+  GP +  T    ++    +V+  +    S   ++ R  G +  T  + + T +   +
Sbjct: 259 DVSEGPLIPRTSVCFQY----EVSAVHNLNPSQPNLIRRFQGLSLPTHLRAQFTIWDKLV 314

Query: 239 EESEK 243
           E S K
Sbjct: 315 ERSRK 319


>gi|145594337|ref|YP_001158634.1| prolyl-tRNA synthetase [Salinispora tropica CNB-440]
 gi|189083512|sp|A4X5V6|SYP_SALTO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|145303674|gb|ABP54256.1| prolyl-tRNA synthetase [Salinispora tropica CNB-440]
          Length = 595

 Score = 47.0 bits (110), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 70/157 (44%), Gaps = 14/157 (8%)

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQV 299
           SE   H+ L R   L  +   G G+  +   GW+  + + + +R ++ +   +E++ P V
Sbjct: 18  SESEGHQLLQRAAMLRQV---GQGIFAYLPLGWRTIRKIEAVLRAELERVGGQEVSMPVV 74

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF--NHGLKSYRE 357
               LW+Q+G +       F +       +D R   L        +  F     ++SYR 
Sbjct: 75  NPAELWKQTGRY-------FTIGPELARFRDRRGRDLVLAMTHEELVTFLGRSEIESYRH 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           LP  + +  + +R++P     GL+RVR F   DA+ F
Sbjct: 128 LPRMVFQLQTKFRDDPR-PRAGLIRVREFVMKDAYSF 163


>gi|156975521|ref|YP_001446428.1| prolyl-tRNA synthetase [Vibrio harveyi ATCC BAA-1116]
 gi|166980171|sp|A7N1W0|SYP_VIBHB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|156527115|gb|ABU72201.1| hypothetical protein VIBHAR_03253 [Vibrio harveyi ATCC BAA-1116]
          Length = 571

 Score = 47.0 bits (110), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 39/162 (24%), Positives = 73/162 (45%), Gaps = 10/162 (6%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINT--PQVLDQHLWQQSGHWDSYRANMFA 320
           SG+  W   G ++ + + + +R++I D+   + T  P V    LW+++G     R+    
Sbjct: 37  SGLYTWLPTGLRVLRKVENIVRQEI-DNAGAVETLMPVVQPFELWEETG-----RSEKMG 90

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +    T +  R F L P       ++  + + SY++LP+ L +  + +R+E      G+
Sbjct: 91  PELLRFTDRHTRPFVLSPTAEEVITSLVRNEVSSYKQLPLNLYQIQTKFRDERRPRF-GV 149

Query: 381 MRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFE 421
           MR R F   DA+ F   KE +      +H+     +   G E
Sbjct: 150 MRAREFCMMDAYSFDIDKEGLEKSYQAMHDAYCKAFDRMGLE 191


>gi|253744932|gb|EET01065.1| Prolyl-tRNA synthetase [Giardia intestinalis ATCC 50581]
          Length = 534

 Score = 47.0 bits (110), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 79/401 (19%), Positives = 161/401 (40%), Gaps = 75/401 (18%)

Query: 271 KGWKIFQTLISYMRRKI----KDDYEEINTPQVL------DQHLWQQSGHWDSYRANMFA 320
           KG  +F+    +M   I    +++Y +I   Q L      +  L ++  H   + A  F 
Sbjct: 61  KGCVVFRPYGFFMENAIMKLCEEEYAKIGISQALFPTVIPESFLKKEGDHIKGFEAECFW 120

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           V+       + R  AL+P +     ++F+  ++SY++LP+++ +  +++R+E   +   L
Sbjct: 121 VEKGGLQPLEER-LALRPTSETAIYSMFSKWVRSYKDLPLKIHQTCTIFRHETKNT-KPL 178

Query: 381 MRVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDA 439
           +RVR    ++AH    T E   ++      ++  I+                     SD 
Sbjct: 179 IRVREIHWNEAHCCHATAEDAVSQLSDYWKVVDIIF---------------------SDE 217

Query: 440 LWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVD 499
           L    + + +   D    +    ++  V+                   GR  Q   I   
Sbjct: 218 LCFKGQKLRRVCWDKFAGADYSEVSDVVM-----------------PCGRVLQTAGIH-- 258

Query: 500 FNLPSRFNA----FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG-NLPLWLSPIQ 554
            NL  RF++     Y N  +E  HP +    +   +      +  + +G  LP  ++PI 
Sbjct: 259 -NLGQRFSSTFDILYANKANENVHPYLTCAGISTRVLACALSIHGDSRGLVLPPLIAPIH 317

Query: 555 AIVTTITSS----------AVEYAQEIANLLK---SHHLSIETDFRNETINYKIREHSIK 601
            ++  I              +E   EIA+ LK      +SI+ DF ++++  K+  + +K
Sbjct: 318 VVIIPIGCGKKNNQESDRQVMEKVNEIADTLKLKLGLRVSIDDDF-SKSMGDKLYYYELK 376

Query: 602 KIPIIIICGDKE-ASERSIGI-RRFGSTTTQKVSLLDAIPI 640
            +P+ I  G ++ A+ + I + R  G    + +S+ D + +
Sbjct: 377 GVPLRIEIGQRDLANNQCIVVPRDMGKDKKKAISITDILKV 417


>gi|212704759|ref|ZP_03312887.1| hypothetical protein DESPIG_02823 [Desulfovibrio piger ATCC 29098]
 gi|212671822|gb|EEB32305.1| hypothetical protein DESPIG_02823 [Desulfovibrio piger ATCC 29098]
          Length = 889

 Score = 47.0 bits (110), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 61/147 (41%), Gaps = 16/147 (10%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSD 117
           + +   ED R      HSC H++  A++S+    V+ A   +      +DF        +
Sbjct: 562 VALSVEEDARMATARNHSCTHLLHAALRSVLGTHVKQAGSLVNSQRLRFDFSHIAALPPE 621

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEK-----ARELFESK-KEAYKVEILESIPAKENV 171
           ELA +E+++   I  D P   + + H++     A  LF  K  +  +V  +      E+V
Sbjct: 622 ELAAVERQVNRAIMADYPVCTKEMKHDEAVASVAMALFNEKYGDTVRVVSMGDDAHTESV 681

Query: 172 TLYRQGEWFDLCRGPHVRSTGQVKKFF 198
                    +LC G H+  TGQ   F 
Sbjct: 682 ---------ELCGGTHLSHTGQAGSFL 699


>gi|254453587|ref|ZP_05067024.1| prolyl-tRNA synthetase [Octadecabacter antarcticus 238]
 gi|198267993|gb|EDY92263.1| prolyl-tRNA synthetase [Octadecabacter antarcticus 238]
          Length = 428

 Score = 47.0 bits (110), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 42/183 (22%), Positives = 79/183 (43%), Gaps = 11/183 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  +G+  W   G+K+ + +   +   + +  +  I  P +    LW++SG +++Y  
Sbjct: 7   IKQSSAGIYSWLPLGFKVLKRIEQIVHEEQERAGHIAIQMPTIQSADLWRESGRYEAYGD 66

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  +K  D    DL      P        +F   + SY+ LP+ L +    +R+E    
Sbjct: 67  EMLRIK--DRNGNDL---LFTPTAEELVTDIFRSHVASYKSLPMTLYQIQWKFRDERRPR 121

Query: 377 LHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
             G+MR R F   D + F  TKE   +   +     +  Y+  G + I ++ ++ P   +
Sbjct: 122 F-GVMRGREFYMKDGYTFDLTKEDAMHAYNRHLVSYLRTYERMGLQAIPMRAASGP---I 177

Query: 436 GSD 438
           G D
Sbjct: 178 GGD 180


>gi|125624689|ref|YP_001033172.1| alanyl-tRNA synthetase [Lactococcus lactis subsp. cremoris MG1363]
 gi|205830128|sp|A2RME6|SYA_LACLM RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|124493497|emb|CAL98475.1| AlaS protein [Lactococcus lactis subsp. cremoris MG1363]
 gi|300071483|gb|ADJ60883.1| alanyl-tRNA synthetase [Lactococcus lactis subsp. cremoris NZ9000]
          Length = 872

 Score = 47.0 bits (110), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 74/162 (45%), Gaps = 23/162 (14%)

Query: 58  SIEIITP------------EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY 105
           S+E I+P            E+ RS  V  H+  H++  A+ +I     +  G + E  F 
Sbjct: 537 SVETISPLKVGETYTLEIDEERRSAVVKNHTATHLLHAALHNIVGNHALQAGSLNEVEFL 596

Query: 106 -YDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES 164
            +DF      S +ELA+IE+++ E+I        Q L  E       + KE   + +   
Sbjct: 597 RFDFTHFAQVSKEELAEIERQVNEVIW-------QSLKVETIETYIATAKEMGAMALFGE 649

Query: 165 IPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKFFKLMKVAG 205
              K NV + + G++  +LC G H ++T ++   FK++K  G
Sbjct: 650 KYGK-NVRVVKIGDYSIELCGGTHTQTTSEI-GLFKIIKEEG 689


>gi|302871149|ref|YP_003839785.1| AAA ATPase [Caldicellulosiruptor obsidiansis OB47]
 gi|302574008|gb|ADL41799.1| AAA ATPase [Caldicellulosiruptor obsidiansis OB47]
          Length = 554

 Score = 47.0 bits (110), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 78/160 (48%), Gaps = 4/160 (2%)

Query: 39  VAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIG 97
           VA  ++ ++ +L   + R+  ++ I       + + R S   ++  A + ++ E  V + 
Sbjct: 43  VAAKVDNEIKELKYVISRDCRVKFIDMTQEDGMRIYRRSLIFVLIVATRMLFKEA-VNVQ 101

Query: 98  PIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAY 157
             +  G Y + +  +  SS ++  I++KM+ II +D  F ++ +S E A +LFE K    
Sbjct: 102 HSLSKGLYCEVENRK-LSSQDIELIKQKMKWIIEQDFQFKREKVSKEDAVKLFEEKGFYD 160

Query: 158 KVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
           K   ++     E V +Y  G++ D   G  V STG +K F
Sbjct: 161 KARTIK-FSENEYVYIYYCGDYVDYFYGHLVPSTGYLKIF 199


>gi|262402773|ref|ZP_06079334.1| prolyl-tRNA synthetase [Vibrio sp. RC586]
 gi|262351555|gb|EEZ00688.1| prolyl-tRNA synthetase [Vibrio sp. RC586]
          Length = 571

 Score = 47.0 bits (110), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 65/134 (48%), Gaps = 9/134 (6%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINT--PQVLDQHLWQQSGHWDSYRANMFA 320
           SG+  W   G ++ + + + +R++I D+   I T  P V    LW+++G     R+    
Sbjct: 37  SGLYTWLPTGLRVLRKVETIVRQEI-DNAGAIETLMPVVQPFELWEETG-----RSEKMG 90

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +    T +  R F L P       A+  + + SY++LP+ L +  + +R+E      G+
Sbjct: 91  PELLRFTDRHERPFVLSPTAEEVITALVRNEVNSYKQLPLNLYQIQTKFRDERRPRF-GV 149

Query: 381 MRVRGFTQDDAHVF 394
           MR R F+  DA+ F
Sbjct: 150 MRAREFSMMDAYSF 163


>gi|90580993|ref|ZP_01236794.1| prolyl-tRNA synthetase [Vibrio angustum S14]
 gi|90437871|gb|EAS63061.1| prolyl-tRNA synthetase [Vibrio angustum S14]
          Length = 571

 Score = 47.0 bits (110), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 40/163 (24%), Positives = 73/163 (44%), Gaps = 10/163 (6%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINT--PQVLDQHLWQQSGHWDSYRANMF 319
            SG+  W   G ++ + + + +R++I D+   I T  P V    LW+++G     R+   
Sbjct: 36  ASGLYTWLPTGLRVLRKVENIVRQEI-DNAGAIETLMPVVQPFELWEETG-----RSEKM 89

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHG 379
             +    T +  R F L P       ++  + + SY++LP+ L +  + +R+E      G
Sbjct: 90  GPELLRFTDRHTRPFVLSPTAEEVITSLVRNEVSSYKQLPLNLYQIQTKFRDERRPRF-G 148

Query: 380 LMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFE 421
           +MR R F   DA+ F   KE +      +H+     +   G E
Sbjct: 149 VMRAREFCMMDAYSFDIDKEGLQKSYDAMHDAYCKAFDRMGLE 191


>gi|327402220|ref|YP_004343058.1| alanyl-tRNA synthetase [Fluviicola taffensis DSM 16823]
 gi|327317728|gb|AEA42220.1| alanyl-tRNA synthetase [Fluviicola taffensis DSM 16823]
          Length = 871

 Score = 47.0 bits (110), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 39/158 (24%), Positives = 71/158 (44%), Gaps = 11/158 (6%)

Query: 44  NGKVCDLSDPVRE---GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII 100
           NG +  L D + E   G       E+ R L+   HS  H++  A++++        G ++
Sbjct: 529 NGLIVHLVDELPEKIDGQFTARVNEESRRLSASNHSATHLLHHALRTVLGAHVEQKGSLV 588

Query: 101 EDGFY-YDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKV 159
              +  +DF      + +E+A+IE      I  D   ++Q LS E++R +     +    
Sbjct: 589 NPNYLRFDFSHFSKVTDEEMAKIEA-----IVIDG--IRQNLSLEESRNVPIDAAQEMGA 641

Query: 160 EILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
             L      + V + + G+  +LC G HV++TGQ+  F
Sbjct: 642 MALFGEKYGDTVRVIKFGDSIELCGGTHVQNTGQIGLF 679


>gi|241190576|ref|YP_002967970.1| prolyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           Bl-04]
 gi|241195982|ref|YP_002969537.1| prolyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis DSM
           10140]
 gi|240248968|gb|ACS45908.1| prolyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           Bl-04]
 gi|240250536|gb|ACS47475.1| prolyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis DSM
           10140]
 gi|295793563|gb|ADG33098.1| prolyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis V9]
          Length = 605

 Score = 47.0 bits (110), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 11/151 (7%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
           +I +   G+  W   G  +   +   +R +I     +E++ P +L +  ++ +  W+ Y 
Sbjct: 35  YIRKAAPGIWTWLPLGLAVLNKIEDVIREEINGIGAQEVHFPALLPREPYEATHRWEEYG 94

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE--P 373
            N+F +K   +       + L P +      +      SY++LPV L +  + YR+E  P
Sbjct: 95  DNIFRLKDRHEA-----DYLLAPTHEEMFTLLVKDMYSSYKDLPVTLYQIQTKYRDEFRP 149

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
                GL+R R F   DA+ F   E+   + 
Sbjct: 150 RA---GLIRGREFIMKDAYSFTVDEEGMRQA 177


>gi|91976212|ref|YP_568871.1| alanyl-tRNA synthetase [Rhodopseudomonas palustris BisB5]
 gi|123735560|sp|Q13AB9|SYA_RHOPS RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|91682668|gb|ABE38970.1| alanyl-tRNA synthetase [Rhodopseudomonas palustris BisB5]
          Length = 891

 Score = 47.0 bits (110), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 35/145 (24%), Positives = 65/145 (44%), Gaps = 7/145 (4%)

Query: 56  EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPF 114
           E ++ +      RS     HS  H++ EA++ +  +     G ++  D   +DF  ++P 
Sbjct: 545 EAALALEVDHSRRSSIRANHSATHLLHEALRQVLGDHIAQKGSMVAPDRLRFDFVHQKPI 604

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKE 169
           + DEL ++E    +I+  +     + ++ + ARE     LF  +K   +V ++    A  
Sbjct: 605 TQDELRRVEDIANDIVLENDEVTTRLMAVDDAREAGARALF-GEKYGDEVRVVSMGKASR 663

Query: 170 NVTLYRQGEWFDLCRGPHVRSTGQV 194
                  G   +LC G HVR TG +
Sbjct: 664 EHGSNAFGWSVELCGGTHVRRTGDI 688


>gi|163803792|ref|ZP_02197646.1| prolyl-tRNA synthetase [Vibrio sp. AND4]
 gi|159172411|gb|EDP57283.1| prolyl-tRNA synthetase [Vibrio sp. AND4]
          Length = 571

 Score = 47.0 bits (110), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 39/162 (24%), Positives = 73/162 (45%), Gaps = 10/162 (6%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINT--PQVLDQHLWQQSGHWDSYRANMFA 320
           SG+  W   G ++ + + + +R++I D+   + T  P V    LW+++G     R+    
Sbjct: 37  SGLYTWLPTGLRVLRKVENIVRQEI-DNAGAVETLMPVVQPFELWEETG-----RSEKMG 90

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +    T +  R F L P       ++  + + SY++LP+ L +  + +R+E      G+
Sbjct: 91  PELLRFTDRHTRPFVLSPTAEEVITSLVRNEVSSYKQLPLNLYQIQTKFRDERRPRF-GV 149

Query: 381 MRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFE 421
           MR R F   DA+ F   KE +      +H+     +   G E
Sbjct: 150 MRAREFCMMDAYSFDIDKEGLEKSYQAMHDAYCKAFDRMGLE 191


>gi|291548182|emb|CBL21290.1| prolyl-tRNA synthetase, family I [Ruminococcus sp. SR1/5]
          Length = 479

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 60/279 (21%), Positives = 113/279 (40%), Gaps = 60/279 (21%)

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLK 406
           +   ++S+R+LP    ++ SV R E +      +R R F   + H    T E+     ++
Sbjct: 124 YQKEIQSHRDLPKVYNQWCSVVRWEKT--TRPFLRSREFLWQEGHTAHATAEEAEQRTIQ 181

Query: 407 IHNLIISIYKDFGFEKIMVKL----STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
           + N    IY DF  E + + +     T  EK  G++A +            TI++   D 
Sbjct: 182 MLN----IYADFCEEVLAIPVIKGQKTDKEKFAGAEATY------------TIESLMHD- 224

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV- 521
                                    G+  Q GT     N    F   +   +++K + + 
Sbjct: 225 -------------------------GKALQSGT---SHNFGDGFAKAFGIQYTDKDNTLK 256

Query: 522 MIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITS---SAVEYAQEIANL 574
            +H+  +G   R IG +I    +N    LP  ++P+Q ++  I       +E A E+   
Sbjct: 257 YVHQTSWGMTTRMIGAIIMVHGDNSGLVLPPRIAPVQTVIIPIQQRKEGVMEKADELLAA 316

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
           LK+  +  + D  +++  +K  E  ++ IP+ + CG K+
Sbjct: 317 LKAAGIRAKVDATDKSPGFKFAEQEMRGIPLRVECGPKD 355


>gi|153835582|ref|ZP_01988249.1| prolyl-tRNA synthetase [Vibrio harveyi HY01]
 gi|148867822|gb|EDL67058.1| prolyl-tRNA synthetase [Vibrio harveyi HY01]
          Length = 571

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 39/162 (24%), Positives = 73/162 (45%), Gaps = 10/162 (6%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINT--PQVLDQHLWQQSGHWDSYRANMFA 320
           SG+  W   G ++ + + + +R++I D+   + T  P V    LW+++G     R+    
Sbjct: 37  SGLYTWLPTGLRVLRKVENIVRQEI-DNAGAVETLMPVVQPFELWEETG-----RSEKMG 90

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +    T +  R F L P       ++  + + SY++LP+ L +  + +R+E      G+
Sbjct: 91  PELLRFTDRHTRPFVLSPTAEEVITSLVRNEVSSYKQLPLNLYQIQTKFRDERRPRF-GV 149

Query: 381 MRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFE 421
           MR R F   DA+ F   KE +      +H+     +   G E
Sbjct: 150 MRAREFCMMDAYSFDIDKEGLEKSYQAMHDAYCKAFDRMGLE 191


>gi|269960577|ref|ZP_06174949.1| prolyl-tRNA synthetase [Vibrio harveyi 1DA3]
 gi|269834654|gb|EEZ88741.1| prolyl-tRNA synthetase [Vibrio harveyi 1DA3]
          Length = 571

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 39/162 (24%), Positives = 73/162 (45%), Gaps = 10/162 (6%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINT--PQVLDQHLWQQSGHWDSYRANMFA 320
           SG+  W   G ++ + + + +R++I D+   + T  P V    LW+++G     R+    
Sbjct: 37  SGLYTWLPTGLRVLRKVENIVRQEI-DNAGAVETLMPVVQPFELWEETG-----RSEKMG 90

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +    T +  R F L P       ++  + + SY++LP+ L +  + +R+E      G+
Sbjct: 91  PELLRFTDRHTRPFVLSPTAEEVITSLVRNEVSSYKQLPLNLYQIQTKFRDERRPRF-GV 149

Query: 381 MRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFE 421
           MR R F   DA+ F   KE +      +H+     +   G E
Sbjct: 150 MRAREFCMMDAYSFDIDKEGLEKSYQAMHDAYCKAFDRMGLE 191


>gi|224437778|ref|ZP_03658725.1| prolyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
 gi|313144224|ref|ZP_07806417.1| prolyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
 gi|313129255|gb|EFR46872.1| prolyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
          Length = 593

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 68/142 (47%), Gaps = 15/142 (10%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVL-----DQHLWQQSGHWD 312
           I + GSG+  +   G K    L+  +R  IK++ +  N  ++L        LW++SG ++
Sbjct: 32  IQQVGSGIYNFLPLGKK----LLDKVRFIIKEEMDITNAQEILMGFVTPADLWRESGRYE 87

Query: 313 SYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE 372
            Y   +  ++  D   +    F L P +      +  +G+KSY++LPV L +  + +R+E
Sbjct: 88  KYGREL--LRLVD---RKENEFVLGPTHEEVVTFIAKNGVKSYKQLPVHLYQIHTKFRDE 142

Query: 373 PSGSLHGLMRVRGFTQDDAHVF 394
                 GLMR R F   D + F
Sbjct: 143 VRPRF-GLMRGREFIMKDGYSF 163


>gi|110667672|ref|YP_657483.1| prolyl-tRNA synthetase [Haloquadratum walsbyi DSM 16790]
 gi|121689813|sp|Q18JG3|SYP_HALWD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|109625419|emb|CAJ51843.1| proline--tRNA ligase [Haloquadratum walsbyi DSM 16790]
          Length = 512

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 65/300 (21%), Positives = 117/300 (39%), Gaps = 54/300 (18%)

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
            A++P +        +  ++SYR+LP+R+ ++ SV R E + +     R + F   + H 
Sbjct: 111 LAVRPTSESIIAPYLSQWIRSYRDLPLRVNQWTSVVRWEATET-KPFFRTKEFLWQEGHT 169

Query: 394 -FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
              T+   + E +   N   S Y+D     I V    +PE                    
Sbjct: 170 AHATRADAWAETMLRLNQYESTYEDL--LAIPVLQGAKPE-------------------- 207

Query: 453 DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF-NAFYV 511
                   D+         GA      E ++ D  G+  Q  T      L + F +AF +
Sbjct: 208 -------HDKF-------PGADTTTTVEALMPD--GKSVQGATSHY---LGTEFADAFDI 248

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTITSS---- 563
                     + H   +G   R +G +I     N    LP  ++P Q ++  I  +    
Sbjct: 249 TYTDTDETSRVAHTTSWGLSWRALGALIMTHSDNQGLVLPPTVAPEQVVIVPIWQTETKE 308

Query: 564 -AVEYAQEIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
             +EYA+++AN L    + +E D R ++   +K  E  +K +P+    G  EA+E ++ +
Sbjct: 309 RVLEYAEDVANNLDDAGIRVELDDRDDQNPGFKFNEWELKGVPLRAEIGPDEATEGTVTL 368


>gi|50954884|ref|YP_062172.1| prolyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07]
 gi|81826655|sp|Q6AEX8|SYP_LEIXX RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|50951366|gb|AAT89067.1| prolyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07]
          Length = 590

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 42/189 (22%), Positives = 82/189 (43%), Gaps = 11/189 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   HR L R     +I     GV  W   G ++   +   +R ++      E++ P 
Sbjct: 19  DAEVTSHRLLVRAG---YIRRQAPGVFAWLPLGLRVKAKIERIIREELAAAGAHEVHFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++ +G W+ Y   +F +K  D    D   + L P +      +      SY++L
Sbjct: 76  LLPREPYEITGRWEEYGDALFHLK--DRKGAD---YLLAPTHEEAFTLLVKDLYSSYKDL 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH-NLIISIYKD 417
           P+ + +    YR+E +    GL+R R FT  DA+ F   +   +   +   +    I+  
Sbjct: 131 PLTIFQIQDKYRDE-ARPRAGLLRGREFTMKDAYSFDATDAGLDVSYQAQRDAYERIFAR 189

Query: 418 FGFEKIMVK 426
            G + ++V+
Sbjct: 190 LGLDFVIVQ 198


>gi|37359720|dbj|BAC97834.1| glutamyl-prolyl-tRNA synthetase [Oryzias latipes]
          Length = 587

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 64/307 (20%), Positives = 117/307 (38%), Gaps = 55/307 (17%)

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
            A++P +       +   ++S+R+LP++L ++ ++ R E        +R R F   + H 
Sbjct: 191 IAVRPTSETVMYPAYAKWVQSHRDLPIKLNQWCNIVRWEFKHP-QPFLRTREFLWQEGHT 249

Query: 394 -FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
            F TKE+   E ++I +L   IY++     ++    T  EK  G D             +
Sbjct: 250 AFATKEEATEEVMQILDLYARIYEELLAIPVVKGRKTEKEKFAGGD---------YTTTV 300

Query: 453 DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
           +   ++S   I        G  +   FE + +D                 P      + N
Sbjct: 301 EAFISASGRAIQGATSHHLGQNFSKMFEIVFEDP--------------KRPGEKQLAFQN 346

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTT------ITSSAVE 566
           S              +G   R IG++      N+ L L P  A V        IT+S  E
Sbjct: 347 S--------------WGITTRTIGVLTMVHGDNMGLVLPPRVACVQVVIIPCGITASLPE 392

Query: 567 YAQEIANLLKSHHLS--------IETDFR-NETINYKIREHSIKKIPIIIICGDKEASER 617
             +E      S +L         +++DFR N +  +K     +K +P+ +  G K+  ++
Sbjct: 393 QEKEALLAQCSKYLKRLLDAGVRVKSDFRDNYSPGWKFNHWELKGVPVRLEVGPKDMQQK 452

Query: 618 S-IGIRR 623
             + +RR
Sbjct: 453 QCVAVRR 459


>gi|71898157|ref|ZP_00680343.1| Prolyl-tRNA synthetase, bacterial [Xylella fastidiosa Ann-1]
 gi|71732131|gb|EAO34187.1| Prolyl-tRNA synthetase, bacterial [Xylella fastidiosa Ann-1]
          Length = 564

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 38/184 (20%), Positives = 76/184 (41%), Gaps = 11/184 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E   HR + R   +  +A   SG+  W   G ++ + + + +R ++ +    E+  P 
Sbjct: 17  DAELVSHRLMLRAGMIRKLA---SGLYTWSPLGLRVLRKVEAIVRDEMNRAGAVEMLLPT 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +  + LW++S  W+ + + +  +K      +    +   P             L SY++L
Sbjct: 74  IQPRELWEESERWEKFGSQLLKIKD-----RKQAEYCYSPTAEEAVTDYVRQELTSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKD 417
           PV   +  + +R+E      G+MR R F   DA+ F      +  E   +      I+  
Sbjct: 129 PVNFYQIQTKFRDEIRPRF-GVMRAREFVMKDAYSFHLNDADLVREYENMRATYTRIFTR 187

Query: 418 FGFE 421
            G E
Sbjct: 188 LGLE 191


>gi|253699963|ref|YP_003021152.1| prolyl-tRNA synthetase [Geobacter sp. M21]
 gi|259511598|sp|C6E496|SYP_GEOSM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|251774813|gb|ACT17394.1| prolyl-tRNA synthetase [Geobacter sp. M21]
          Length = 573

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 30/106 (28%), Positives = 46/106 (43%), Gaps = 6/106 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P V    LW++SG W+ Y   +       D       F + P +      +    +
Sbjct: 68  ELLMPAVQPAELWKESGRWEFYGKELLRFNDRKDA-----EFCMGPTHEEVITDLIRKEV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE 398
           +SYR+LP+ L +    +R+E      GLMR R F   DA+ F   E
Sbjct: 123 RSYRQLPINLYQIQGKFRDEIRPRF-GLMRGREFIMKDAYSFDVNE 167


>gi|197119263|ref|YP_002139690.1| prolyl-tRNA synthetase [Geobacter bemidjiensis Bem]
 gi|226701292|sp|B5EIT9|SYP_GEOBB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|197088623|gb|ACH39894.1| prolyl-tRNA synthetase [Geobacter bemidjiensis Bem]
          Length = 573

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 30/106 (28%), Positives = 46/106 (43%), Gaps = 6/106 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P V    LW++SG W+ Y   +       D       F + P +      +    +
Sbjct: 68  ELLMPAVQPAELWKESGRWEFYGKELLRFNDRKDA-----EFCMGPTHEEVITDLIRKEV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE 398
           +SYR+LP+ L +    +R+E      GLMR R F   DA+ F   E
Sbjct: 123 RSYRQLPINLYQIQGKFRDEIRPRF-GLMRGREFIMKDAYSFDVNE 167


>gi|66819305|ref|XP_643312.1| prolyl-tRNA synthetase [Dictyostelium discoideum AX4]
 gi|60471379|gb|EAL69339.1| prolyl-tRNA synthetase [Dictyostelium discoideum AX4]
          Length = 674

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 52/112 (46%), Gaps = 14/112 (12%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK----DLRTFALKPMNCPGHVAV 347
           ++++ P++L + LW+++G WDS           DD IK        + L P +      +
Sbjct: 117 QKMSMPKMLPRELWEKTGRWDS---------AGDDLIKLKDRKGEEYCLAPTHEEVITTI 167

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQ 399
             +   S    P++L + G  YR+E      GL+R R FT  D + F T ++
Sbjct: 168 VANESLSNSSFPIKLYQIGEKYRDEVRPRF-GLLRGREFTMKDMYSFDTSKE 218


>gi|323701857|ref|ZP_08113527.1| prolyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
 gi|323533161|gb|EGB23030.1| prolyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
          Length = 568

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 38/156 (24%), Positives = 70/156 (44%), Gaps = 10/156 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+E   H+ L R      I +  SG+  +     ++ + +   +R ++ K   +E+  P 
Sbjct: 17  EAEVVSHQLLLRA---GFIRKSASGIYTYLPLAQRVLKKIKEIVREEMDKQGGQELLMPI 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    +W +SG W  Y   +F +K   +     R F L P +      +    ++SY+++
Sbjct: 74  VQPAEMWLESGRWHVYGPELFRLKDRHN-----RDFCLGPTHEEVITILVRGEVRSYKQM 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           P+ L +  + +R+E      GLMR R F   D + F
Sbjct: 129 PLLLYQIQNKFRDERRPRF-GLMRGREFIMKDLYSF 163


>gi|320528975|ref|ZP_08030067.1| phosphoribulokinase / Uridine kinase family protein [Selenomonas
           artemidis F0399]
 gi|320138605|gb|EFW30495.1| phosphoribulokinase / Uridine kinase family protein [Selenomonas
           artemidis F0399]
          Length = 538

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 39/175 (22%), Positives = 79/175 (45%), Gaps = 3/175 (1%)

Query: 25  DVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSCAHIMAE 83
           ++A   S   A   VA  ++G+V DL     E + I+ I         V R S   ++  
Sbjct: 7   EIAREHSHEYASPIVAAVVDGEVHDLQSLYHESNDIKFIELNSRLGWRVYRRSVLFLLIV 66

Query: 84  AVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQIEKKMQEIIARDSPFLKQYLS 142
           AV  +  + +V     +  G + +    ++      + +IE  M+++I+ +  F K+ ++
Sbjct: 67  AVNELDKDAEVIAKFTVNKGLFCEIQHPDKSIDVHFVKEIEAVMRQMISENIAFCKRSVA 126

Query: 143 HEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
            E+A ELF  +    KV ++  +  +  ++LY    + D   GP +  T ++ +F
Sbjct: 127 REEAIELFRKEGRYGKVNLISEL-TQPYISLYTCKSYADYLYGPMLHETKELNQF 180


>gi|218529196|ref|YP_002420012.1| prolyl-tRNA synthetase [Methylobacterium chloromethanicum CM4]
 gi|254782907|sp|B7KPK1|SYP_METC4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|218521499|gb|ACK82084.1| prolyl-tRNA synthetase [Methylobacterium chloromethanicum CM4]
          Length = 441

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 47/212 (22%), Positives = 84/212 (39%), Gaps = 21/212 (9%)

Query: 236 YFL-------EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKI 287
           YFL       +E+E   HR + R      I ++ +G+  W   G ++   +   +R  + 
Sbjct: 6   YFLPILRETPKEAEIISHRLMLRAG---MIRQEAAGIYAWLPLGLRVLNKVCDVVRAEQD 62

Query: 288 KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
           +    EI  P +    LW++SG +++Y   M  +K   +     R     P        +
Sbjct: 63  RAGAIEILMPTIQAADLWRESGRYEAYGKEMLRLKDRHE-----RELLYGPTAEEVVTEI 117

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-K 406
           F    +SY++LP  L +    +R+E      G MR R F   D + F   +        K
Sbjct: 118 FRASTRSYKDLPKNLYQISWKFRDEVRPRF-GTMRSREFLMKDGYSFDIDQAAARHSYNK 176

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD 438
           +    +  ++  G   I ++  T P   +G D
Sbjct: 177 VFVSYLRTFERLGLRAIPMRADTGP---IGGD 205


>gi|120612314|ref|YP_971992.1| prolyl-tRNA synthetase [Acidovorax citrulli AAC00-1]
 gi|152074741|sp|A1TTD0|SYP_ACIAC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|120590778|gb|ABM34218.1| prolyl-tRNA synthetase [Acidovorax citrulli AAC00-1]
          Length = 581

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 31/134 (23%), Positives = 63/134 (47%), Gaps = 7/134 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           G+G+  +   G ++ + + + +R ++ +    E+  P V     WQ++G +D     +  
Sbjct: 36  GAGIYNYMPMGLRVIRKVEAIVREEMNRAGAVEVTMPVVQPAEYWQETGRFDKMGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           ++      +  R F ++P +      +    L+SY++LP  L +  + +R+E      GL
Sbjct: 96  IRD-----RHGRDFVVQPTSEEVVTDIARQELRSYKQLPKNLYQIQTKFRDERRPRF-GL 149

Query: 381 MRVRGFTQDDAHVF 394
           MR R F   DA+ F
Sbjct: 150 MRGREFIMKDAYSF 163


>gi|86750846|ref|YP_487342.1| alanyl-tRNA synthetase [Rhodopseudomonas palustris HaA2]
 gi|123292252|sp|Q2ITM9|SYA_RHOP2 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|86573874|gb|ABD08431.1| alanyl-tRNA synthetase [Rhodopseudomonas palustris HaA2]
          Length = 891

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 33/146 (22%), Positives = 67/146 (45%), Gaps = 7/146 (4%)

Query: 55  REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQP 113
           R+ ++++      RS     HS  H++ EA++ +  +     G ++  D   +DF  ++P
Sbjct: 544 RDAALQLDVDHARRSSIRANHSATHLLHEALRQVLGDHIAQKGSMVAPDRLRFDFVHQKP 603

Query: 114 FSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAK 168
            + DEL ++E    +I+  +     + ++ + ARE     LF  +K   +V ++      
Sbjct: 604 ITPDELRRVEDIANDIVLENDEVTTRLMAVDDAREAGARALF-GEKYGDEVRVVSMGKTA 662

Query: 169 ENVTLYRQGEWFDLCRGPHVRSTGQV 194
            +      G   +LC G HV+ TG +
Sbjct: 663 RDSGSNALGWSVELCGGTHVKRTGDI 688


>gi|289178315|gb|ADC85561.1| Prolyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           BB-12]
          Length = 615

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 11/151 (7%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
           +I +   G+  W   G  +   +   +R +I     +E++ P +L +  ++ +  W+ Y 
Sbjct: 45  YIRKAAPGIWTWLPLGLAVLNKIEDVIREEINGIGAQEVHFPALLPREPYEATHRWEEYG 104

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE--P 373
            N+F +K   +       + L P +      +      SY++LPV L +  + YR+E  P
Sbjct: 105 DNIFRLKDRHEA-----DYLLAPTHEEMFTLLVKDMYSSYKDLPVTLYQIQTKYRDEFRP 159

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
                GL+R R F   DA+ F   E+   + 
Sbjct: 160 RA---GLIRGREFIMKDAYSFTVDEEGMRQA 187


>gi|258511993|ref|YP_003185427.1| alanyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257478719|gb|ACV59038.1| alanyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 879

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 36/142 (25%), Positives = 66/142 (46%), Gaps = 9/142 (6%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSS 116
           S+     ED R   V  H+  H++ +A++ +        G ++E +   +DF    P + 
Sbjct: 546 SVRAHVDEDFRRDIVKNHTATHLLHKALRDVLGTHVAQAGSLVEPERLRFDFSHFGPLTD 605

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
           +ELA++E+++ + I RD      +  H +  +L E+K  A     L      + V + + 
Sbjct: 606 EELAEVERRVNDEIWRD------HAVHIREMDLDEAK--AMGAMALFGEKYGQRVRVVQA 657

Query: 177 GEWFDLCRGPHVRSTGQVKKFF 198
           GE  +LC G HV  T  + +F 
Sbjct: 658 GESIELCGGCHVPRTSVIGQFL 679


>gi|254466898|ref|ZP_05080309.1| prolyl-tRNA synthetase [Rhodobacterales bacterium Y4I]
 gi|206687806|gb|EDZ48288.1| prolyl-tRNA synthetase [Rhodobacterales bacterium Y4I]
          Length = 451

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 41/183 (22%), Positives = 78/183 (42%), Gaps = 11/183 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  +G+  W   G+K+ + + S +   +I+  +  +    +    LW++SG +D Y  
Sbjct: 32  IKQSSAGIYSWLPLGFKVLKKIESIVHDEQIRAGHIPMLMATMQPADLWRESGRYDDYGQ 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  +K   D     R     P N      +F   + SY++LP+ + +    +R+E    
Sbjct: 92  EMLRIKDRHD-----RDMLFGPTNEEMITDIFRAHVSSYKDLPLTMYQVQWKFRDEIRPR 146

Query: 377 LHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
             G+MR R F   D + F  +KE   +   +     +  Y+  G + I ++    P   +
Sbjct: 147 F-GVMRGREFYMKDGYNFDLSKEDALHAYNRHLVSYLRTYERMGLQAIPMRADGGP---I 202

Query: 436 GSD 438
           G D
Sbjct: 203 GGD 205


>gi|319795456|ref|YP_004157096.1| prolyL-tRNA synthetase [Variovorax paradoxus EPS]
 gi|315597919|gb|ADU38985.1| prolyl-tRNA synthetase [Variovorax paradoxus EPS]
          Length = 581

 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 35/156 (22%), Positives = 71/156 (45%), Gaps = 10/156 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E   HR + R      I + G+G+  +   G ++ + + + +R ++ +    E+  P 
Sbjct: 17  DAEVASHRLMMRAG---MIKKLGTGIYTYMPMGLRVIRKVEAIVREEMNRAGAIELTMPV 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V     WQ++G ++     +  +K   D     R F ++P +      +    ++SY++L
Sbjct: 74  VQPAEFWQETGRFEKMGPELLRIKDRHD-----RDFVIQPTSEEVVTDIARQEIRSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           P    +  + +R+E      GLMR R F   DA+ F
Sbjct: 129 PKNFYQIQTKFRDERRPRF-GLMRGREFIMKDAYSF 163


>gi|260592035|ref|ZP_05857493.1| phosphoribulokinase family protein [Prevotella veroralis F0319]
 gi|260536319|gb|EEX18936.1| phosphoribulokinase family protein [Prevotella veroralis F0319]
          Length = 555

 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 38/181 (20%), Positives = 81/181 (44%), Gaps = 2/181 (1%)

Query: 18  PVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPEDPRSLAVIRHS 76
           P+ +T SD+ + I+  +    V+  +N KV  L   V     +E +       +     S
Sbjct: 21  PMGSTLSDIFKEINLQMPYGPVSAKVNNKVEGLHYRVYHNKDVEYLDLHTQSGIRTYTRS 80

Query: 77  CAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPF 136
              ++ +AV  ++   +V I   + +G+Y +       +++++ +I  +MQEI+    P 
Sbjct: 81  LFLVLCKAVHDLYSRSEVIIDIPVSNGYYCNLKLGHAITAEDVNRIRTRMQEIVNAHLPI 140

Query: 137 LKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKK 196
            +   + E+A ++F    +  K ++L+S      V  Y   ++ D   G  + +T Q+  
Sbjct: 141 QRFETTTEEAIDMFSKLGDEQKAKLLKSSGTLYTV-YYVLDDYKDYYYGSMLTNTSQLYL 199

Query: 197 F 197
           F
Sbjct: 200 F 200


>gi|257456350|ref|ZP_05621547.1| alanyl-tRNA synthetase [Treponema vincentii ATCC 35580]
 gi|257446436|gb|EEV21482.1| alanyl-tRNA synthetase [Treponema vincentii ATCC 35580]
          Length = 600

 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 62/130 (47%), Gaps = 20/130 (15%)

Query: 75  HSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           H+  H++ +A++ +  + V+     I  +   +DF   QP +++E A++E+ + E I  D
Sbjct: 463 HTATHLLHKALRMVLGDHVEQKGSNITAERLRFDFSHPQPMTAEEKAEVERIVNEQIQAD 522

Query: 134 SPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWF-DLCRGPH 187
            P   + +  E+A+      LF  K E             + V +Y  G +  ++C GPH
Sbjct: 523 LPVTMEIMPLEEAKRAGAMALFGEKYE-------------DTVKVYSIGNFSKEVCGGPH 569

Query: 188 VRSTGQVKKF 197
           V  TG + KF
Sbjct: 570 VEHTGVLGKF 579


>gi|254524059|ref|ZP_05136114.1| alanyl-tRNA synthetase [Stenotrophomonas sp. SKA14]
 gi|219721650|gb|EED40175.1| alanyl-tRNA synthetase [Stenotrophomonas sp. SKA14]
          Length = 882

 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 34/140 (24%), Positives = 65/140 (46%), Gaps = 11/140 (7%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKM 126
           R   ++ HS  H++  A++ +    VQ     +  D   +DF   QP S++ELA IE+K+
Sbjct: 564 RGATILNHSATHLLHAALREVLGTHVQQKGSLVAPDRLRFDFSHFQPISAEELAVIERKV 623

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRG 185
            + +  ++      ++ ++A +        +    L      E+V + + G++  +LC G
Sbjct: 624 NQQVRANNAAEVHTMAMQEALD--------FGAMALFGEKYGEHVRVLKMGDYSTELCGG 675

Query: 186 PHVRSTGQVKKFFKLMKVAG 205
            HV  TG +   FK+    G
Sbjct: 676 THVNRTGDI-GLFKITSEGG 694


>gi|91762223|ref|ZP_01264188.1| alanine-tRNA ligase [Candidatus Pelagibacter ubique HTCC1002]
 gi|91718025|gb|EAS84675.1| alanine-tRNA ligase [Candidatus Pelagibacter ubique HTCC1002]
          Length = 889

 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 80/161 (49%), Gaps = 18/161 (11%)

Query: 45  GKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DG 103
           GKV   S  +++ S+E+      R+     HS  H++ EA++ +  E     G +++ D 
Sbjct: 535 GKVKKGSVKLKD-SVELKIDTQRRNNIRAYHSATHLLHEALRRVLGEHVTQKGSLVQSDR 593

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYK 158
             +DF   +P S +E+ +IE  +  II + S    + ++ ++A E     LF  +K   +
Sbjct: 594 LRFDFSHMKPISDEEMKKIEHYVNSIIEKKSEVKTRIMTPKEAVENGALALF-GEKYGDE 652

Query: 159 VEILESIPAKENVTLYRQGEWF--DLCRGPHVRSTGQVKKF 197
           V +L S+  +E       G++F  +LC G HV +T  + KF
Sbjct: 653 VRVL-SMGDEE-------GKFFSTELCGGTHVVNTADIGKF 685


>gi|313895739|ref|ZP_07829295.1| phosphoribulokinase/uridine kinase family protein [Selenomonas sp.
           oral taxon 137 str. F0430]
 gi|312975865|gb|EFR41324.1| phosphoribulokinase/uridine kinase family protein [Selenomonas sp.
           oral taxon 137 str. F0430]
          Length = 538

 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 39/175 (22%), Positives = 79/175 (45%), Gaps = 3/175 (1%)

Query: 25  DVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSCAHIMAE 83
           ++A   S   A   VA  ++G+V DL     E + I+ I         V R S   ++  
Sbjct: 7   EIAREHSHEYASPIVAAVVDGEVHDLQSLYHESNDIKFIELNSRLGWRVYRRSVLFLLIV 66

Query: 84  AVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQIEKKMQEIIARDSPFLKQYLS 142
           AV  +  + +V     +  G + +    ++      + +IE  M+++I+ +  F K+ ++
Sbjct: 67  AVNELDKDAEVIAKFTVNKGLFCEIQHPDKSIDVHFVKEIEAVMRQMISENIAFCKRSVA 126

Query: 143 HEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
            E+A ELF  +    KV ++  +  +  ++LY    + D   GP +  T ++ +F
Sbjct: 127 REEAIELFRKEGRYGKVHLISEL-TQPYISLYTCKSYADYLYGPMLHETKELNQF 180


>gi|307717987|ref|YP_003873519.1| prolyl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
 gi|306531712|gb|ADN01246.1| prolyl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
          Length = 577

 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 46/182 (25%), Positives = 81/182 (44%), Gaps = 10/182 (5%)

Query: 216 MLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGW 273
           M SR+Y    NT+   +Q       +  R+H      + +   ++   G G+  +   G 
Sbjct: 1   MTSRVY-IPHNTRMRYSQLFPHTLRTLPREHEGTPYGLLVKGGYVRGLGQGLYSFLPLGL 59

Query: 274 KIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           ++F  L   +  ++K    +E+  P V    LW++SG       ++  VK +D   +  R
Sbjct: 60  RVFYKLKRLIAGEMKRLGGQEVLAPLVNPMELWERSGRDLLVGGDL--VKFSD---RAGR 114

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
              + P +    V +    ++SYR LPV L +F + YR+E    + GL+R R F   D +
Sbjct: 115 QMVISPTHEEAMVELLRQSMRSYRMLPVFLYQFQTKYRDEERVRI-GLLRSREFIMKDGY 173

Query: 393 VF 394
            F
Sbjct: 174 SF 175


>gi|296126160|ref|YP_003633412.1| alanyl-tRNA synthetase [Brachyspira murdochii DSM 12563]
 gi|296017976|gb|ADG71213.1| alanyl-tRNA synthetase [Brachyspira murdochii DSM 12563]
          Length = 857

 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 36/145 (24%), Positives = 60/145 (41%), Gaps = 8/145 (5%)

Query: 55  REGS-IEIITPEDPRSLAVIRHSCAHIMAEAVQ-SIWPEVQVAIGPIIEDGFYYDFDKEQ 112
           +EG  I +    D R      H+  HI+   ++ ++   V  A   + ED   +DF    
Sbjct: 527 KEGEEITLFVNADRRMAIRKNHTATHILQRVLELTLGNHVNQAGSYVCEDYLRFDFTHPD 586

Query: 113 PFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVT 172
             S + L  IE K+ E++ +  P + +Y+S E      E+     K    E  P    + 
Sbjct: 587 SISEETLLNIENKVNEVVFKSMPAVIKYMSKE------EAISSGAKALFGEKYPDTVRIL 640

Query: 173 LYRQGEWFDLCRGPHVRSTGQVKKF 197
               G   +LC G H+ +T +V  F
Sbjct: 641 DIGDGFSVELCGGSHLTNTSEVGYF 665


>gi|261212071|ref|ZP_05926357.1| prolyl-tRNA synthetase [Vibrio sp. RC341]
 gi|260838679|gb|EEX65330.1| prolyl-tRNA synthetase [Vibrio sp. RC341]
          Length = 546

 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 65/134 (48%), Gaps = 9/134 (6%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINT--PQVLDQHLWQQSGHWDSYRANMFA 320
           SG+  W   G ++ + + + +R++I D+   I T  P V    LW+++G     R+    
Sbjct: 12  SGLYTWLPTGLRVLRKVETIVRQEI-DNAGAIETLMPVVQPFELWEETG-----RSEKMG 65

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +    T +  R F L P       A+  + + SY++LP+ L +  + +R+E      G+
Sbjct: 66  PELLRFTDRHERPFVLSPTAEEVITALVRNEVNSYKQLPLNLYQIQTKFRDERRPRF-GV 124

Query: 381 MRVRGFTQDDAHVF 394
           MR R F+  DA+ F
Sbjct: 125 MRAREFSMMDAYSF 138


>gi|242081969|ref|XP_002445753.1| hypothetical protein SORBIDRAFT_07g025100 [Sorghum bicolor]
 gi|241942103|gb|EES15248.1| hypothetical protein SORBIDRAFT_07g025100 [Sorghum bicolor]
          Length = 508

 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 71/302 (23%), Positives = 123/302 (40%), Gaps = 54/302 (17%)

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV- 393
           A++P +       F+  ++S+R+LP+R  ++ +V R E S      +R R F   + H  
Sbjct: 128 AIRPTSETVMYPYFSKWIRSHRDLPLRCNQWCNVVRWEFSNPTP-FIRSREFLWQEGHTA 186

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
           F TKE+   E L+I  L   IY++F    + V +S                    KG   
Sbjct: 187 FATKEEADEEVLQILELYRRIYEEF----LAVPVS--------------------KG--- 219

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVN 512
             + S  ++         G  Y    E  + +  GR  Q  T   +  N    F+  + N
Sbjct: 220 --RKSEMEKF-------AGGLYTTSVEAFIPNT-GRGIQGATSHCLGQNFAKMFDITFEN 269

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTIT-----SS 563
              EK    M+ +  +    R IG+M+     +    LP  ++PIQ IV  +      ++
Sbjct: 270 ---EKGVREMVWQNSWAYTTRSIGVMVMTHGDDKGLVLPPKVAPIQVIVIAVPYKDADTT 326

Query: 564 AVEYAQE-IANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
           A++ A E     L    +  + D R N +  +K     +K +P+ I  G K+ + + + I
Sbjct: 327 AIKGACESTVYTLNESGIRADQDTRENYSPGWKYSHWEMKGVPLRIEIGPKDLANKQVRI 386

Query: 622 RR 623
            R
Sbjct: 387 VR 388


>gi|307564814|ref|ZP_07627342.1| phosphoribulokinase/uridine kinase family protein [Prevotella amnii
           CRIS 21A-A]
 gi|307346536|gb|EFN91845.1| phosphoribulokinase/uridine kinase family protein [Prevotella amnii
           CRIS 21A-A]
          Length = 553

 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 37/178 (20%), Positives = 79/178 (44%), Gaps = 2/178 (1%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIRHSCAH 79
           +T  D+      ++    V+  +N KV  L   V +   +E +    P  +     S   
Sbjct: 22  STLEDIYSLTGLNIPYGPVSARVNNKVEGLHFCVYQNKDVEYLGLNTPSGIRTYTRSLFM 81

Query: 80  IMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQ 139
           ++ +AV  ++P  +V I   I +G+Y +         +++ +I  +M +II  + P  + 
Sbjct: 82  VLCKAVHDLYPGSEVIIDIPISNGYYCNLSLGHKVEEEDVYKIRNRMSQIIEANLPIQRF 141

Query: 140 YLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
             + E+A ++F    +  KV++L+S  +  +V  Y   ++ D   G  +  T ++  F
Sbjct: 142 ESTTEEAIDMFAKLGDEAKVKLLKSSTSLYSV-FYVLDDYIDYYYGSMLTKTKEITLF 198


>gi|296135261|ref|YP_003642503.1| alanyl-tRNA synthetase [Thiomonas intermedia K12]
 gi|295795383|gb|ADG30173.1| alanyl-tRNA synthetase [Thiomonas intermedia K12]
          Length = 917

 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 69/149 (46%), Gaps = 10/149 (6%)

Query: 51  SDPVREGSIEIITPEDPRSLAVIR-HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDF 108
           S  ++ G I     +  R LAV+R HS  H+M +A++ +  +     G +++ D   +DF
Sbjct: 580 SGSLKVGEIVAAQVDGERRLAVMRNHSVTHLMHKALRLVLGDHVQQKGSLVDADKTRFDF 639

Query: 109 DKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK 168
             + P S DE+A++E+ + E I  ++          +AR +   + +     +L      
Sbjct: 640 AHDAPMSDDEIARVERLVNEEILANAA--------TQARVMPIDEAKGMGAMMLFGEKYG 691

Query: 169 ENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
           + V +   G   +LC G HV  TG +  F
Sbjct: 692 DTVRVLDIGTSRELCGGTHVARTGDIGLF 720


>gi|123965807|ref|YP_001010888.1| prolyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515]
 gi|152112942|sp|A2BVH0|SYP_PROM5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|123200173|gb|ABM71781.1| Prolyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515]
          Length = 600

 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 63/133 (47%), Gaps = 10/133 (7%)

Query: 297 PQVLDQHLWQQSGHWDSYRAN---MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           PQ+    LW++S  W+ Y A    MF +K      +  + F L P +      + +  + 
Sbjct: 73  PQLHPAELWKRSERWEGYTAGEGIMFNLKD-----RQGKEFGLAPTHEEVITNIASEIIN 127

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLII 412
           SY++LP+   +  + +R+E      GLMR R F   D + F  +KE + +   K+     
Sbjct: 128 SYKQLPLCFYQIQTKFRDEIRPRF-GLMRSREFIMKDGYSFHSSKEDLSSFYEKMERSYE 186

Query: 413 SIYKDFGFEKIMV 425
           +I+K+ G + + V
Sbjct: 187 NIFKNCGLDTVGV 199


>gi|296394267|ref|YP_003659151.1| prolyl-tRNA synthetase [Segniliparus rotundus DSM 44985]
 gi|296181414|gb|ADG98320.1| prolyl-tRNA synthetase [Segniliparus rotundus DSM 44985]
          Length = 599

 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 44/192 (22%), Positives = 82/192 (42%), Gaps = 11/192 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E  +H+ L R   +  ++    GV  W   G K+ + + + +R ++     +EI  P 
Sbjct: 19  DAEVANHKLLVRGGYVRRVS---PGVFTWLPLGLKVLRQVEAVVREEMDAIGAQEILLPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +  +  ++ S  W  Y  N+F +K  D    D   + L P +      +      SY++L
Sbjct: 76  LAPRQPYETSNRWTEYGDNLFRLK--DRKGGD---YLLAPTHEELFALIVKGEYTSYKDL 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH-NLIISIYKD 417
           PV L +  + YR+E      G++R R F   DA+ F   E         H +    I+  
Sbjct: 131 PVILYQIQTKYRDEER-PRAGILRGREFVMKDAYSFDVDEAGNKAAYHAHRDAYQRIFDR 189

Query: 418 FGFEKIMVKLST 429
            G   ++V  ++
Sbjct: 190 LGVSYVIVAATS 201


>gi|262202081|ref|YP_003273289.1| prolyl-tRNA synthetase [Gordonia bronchialis DSM 43247]
 gi|262085428|gb|ACY21396.1| prolyl-tRNA synthetase [Gordonia bronchialis DSM 43247]
          Length = 576

 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 77/174 (44%), Gaps = 18/174 (10%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R     ++     GV  W   G ++ + + + +R ++     +EI  P 
Sbjct: 15  DAEVPSHKLLVRGG---YVRRAAPGVYTWLPLGLRVLKAIENVVREEMDAIGAQEILLPA 71

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L +  ++ +G W  Y   +F +K  D    D+       +  P H  +F + +K    S
Sbjct: 72  LLPRDPYETTGRWTEYGDALFRLK--DRKGADM-------LLGPTHEELFANLVKGEYSS 122

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
           Y++LPV L +  + YR+E      G++R R F   DA+ F   +       + H
Sbjct: 123 YKDLPVILYQIQTKYRDEER-PRAGILRGREFVMKDAYSFDLDDDGLKVSYQAH 175


>gi|16126174|ref|NP_420738.1| prolyl-tRNA synthetase [Caulobacter crescentus CB15]
 gi|221234945|ref|YP_002517381.1| prolyl-tRNA synthetase [Caulobacter crescentus NA1000]
 gi|81856261|sp|Q9A6Z5|SYP_CAUCR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|254782893|sp|B8GWT1|SYP_CAUCN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|13423386|gb|AAK23906.1| prolyl-tRNA synthetase [Caulobacter crescentus CB15]
 gi|220964117|gb|ACL95473.1| prolyl-tRNA synthetase [Caulobacter crescentus NA1000]
          Length = 443

 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 39/183 (21%), Positives = 77/183 (42%), Gaps = 11/183 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I ++ +G+  W   G ++   +   +R ++ +    E+  P +    LW++SG +D Y  
Sbjct: 32  IRQEAAGIYAWLPLGLRVLNKIEQIVREEMDRAGAIELLMPTIQLADLWRESGRYDDYGD 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  +     T +  R     P        +F   +KSY++LP  L      +R+E    
Sbjct: 92  EMLRI-----TDRHKRELLFGPTAEEVVTDIFRASIKSYKDLPKNLYNIQWKFRDERRPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
             G+MR R F   DA+ F        +   ++    ++++   G + + ++  T P   +
Sbjct: 147 F-GVMRGREFLMKDAYSFDLDADGARKSYNRMFVAYLNLFARMGLKAVPMRADTGP---I 202

Query: 436 GSD 438
           G D
Sbjct: 203 GGD 205


>gi|237752688|ref|ZP_04583168.1| prolyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430]
 gi|229376177|gb|EEO26268.1| prolyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430]
          Length = 582

 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 61/138 (44%), Gaps = 7/138 (5%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I + GSG+  +   G ++   + S ++ ++ +    E+    V   +LWQ+SG ++ Y  
Sbjct: 32  IQQIGSGIYNFLPLGKRVLDKIKSIVKEEMDNAGANEVTLGFVTPANLWQKSGRFERYGK 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            +       D       F L P +      +    +KSY++LP+ L +    +R+E    
Sbjct: 92  ELLRFNDRKDN-----AFVLGPTHEEVITELVKANVKSYKQLPLHLYQINLKFRDEMRPR 146

Query: 377 LHGLMRVRGFTQDDAHVF 394
             GLMR R F   D + F
Sbjct: 147 F-GLMRAREFIMKDGYSF 163


>gi|222086162|ref|YP_002544694.1| alanyl-tRNA synthetase protein [Agrobacterium radiobacter K84]
 gi|221723610|gb|ACM26766.1| alanyl-tRNA synthetase protein [Agrobacterium radiobacter K84]
          Length = 886

 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 57/228 (25%), Positives = 102/228 (44%), Gaps = 26/228 (11%)

Query: 47  VCDLSD-PVREGSIEIITPE-DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DG 103
           +  +SD  ++ G   ++T + + RS     HS  H++ EA++ +        G ++  + 
Sbjct: 534 IATVSDGTIKTGDAVVLTVDHNRRSRLRANHSATHLLHEALREVLGTHVAQKGSLVAPER 593

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLS-----HEKARELFESKKEAYK 158
             +D    +P S++EL  +E    EI+ ++SP   + +S      E A  LF    E Y 
Sbjct: 594 LRFDVSHPKPMSAEELKIVEDMANEIVLQNSPVTTRLMSVDDAIAEGAMALF---GEKYG 650

Query: 159 VEILESIPAKENVTLYRQGEWF--DLCRGPHVRSTGQVKKFFKLMKVA-GAYWR------ 209
            E+   +   + V   + G+ +  +LC G H  +TGQ+     L   A GA  R      
Sbjct: 651 DEV-RVVSMGQGVRGAKAGKPYSIELCGGTHASATGQIGLIRILGDSAVGAGVRRIEAVT 709

Query: 210 GDSNRPMLS----RIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREM 253
           G+S R  L+    R+   A   + + T  +  + E+   + RKL RE+
Sbjct: 710 GESARDYLAEQDDRVKALATALKVQPTDVVSRV-EALMDERRKLEREL 756


>gi|126737803|ref|ZP_01753533.1| alanyl-tRNA synthetase [Roseobacter sp. SK209-2-6]
 gi|126721196|gb|EBA17900.1| alanyl-tRNA synthetase [Roseobacter sp. SK209-2-6]
          Length = 883

 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 33/138 (23%), Positives = 62/138 (44%), Gaps = 5/138 (3%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPI-IEDGFYYDFDKEQPFSSDELAQIEKKM 126
           RS     HS  H++ EA+++   E     G +  +D   +DF   +  S+ EL ++  ++
Sbjct: 555 RSQIRANHSATHLLHEALRNALGEHVAQKGSLNADDRLRFDFSHNKAMSAGELVKVGAEV 614

Query: 127 QEIIARDSPFLKQYLSHEKARELFESK--KEAYKVEILESIPAKENVTLYRQGEWF--DL 182
            + I +++    + ++ + AR+L       E Y  E+      K        G+ +  +L
Sbjct: 615 NDFIRQNTEVTTRIMTPDDARDLGAQALFGEKYGEEVRVVSMGKAETGKGHDGQTYSIEL 674

Query: 183 CRGPHVRSTGQVKKFFKL 200
           C G HV+ TG +  F  L
Sbjct: 675 CGGTHVKQTGDIGTFVIL 692


>gi|16741492|gb|AAH16561.1| Mitochondrial ribosomal protein L39 [Mus musculus]
          Length = 297

 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 85/192 (44%), Gaps = 24/192 (12%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIR---HS 76
           +T    A  +S     K++   ++G+  D+  P+ +   I+ +T +DP    V +    S
Sbjct: 44  STPYSCAMHLSEWYCSKSILALVDGQPWDMYKPLTKSCEIKFLTFKDPDPREVNKAYWRS 103

Query: 77  CAHIMAEAVQSIWPE------VQVAIGPIIEDGFYYD------FDKEQPFSSDELAQIEK 124
           CA ++   ++  + +      ++    P+I   F YD       D+  P + + L    K
Sbjct: 104 CAMMLGCVIERAFKDDYVVSLLRAPEVPVIAGAFCYDVTLDKRLDEWMP-TKENLRSFTK 162

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN----VTLYRQGEWF 180
               +I RD PF    +    A E+F+  K  YKV+ +E   A +N    V L+R G++ 
Sbjct: 163 DAHALIYRDLPFETLDVDARVALEIFQHNK--YKVDFIEE-KASQNPERIVKLHRIGDFI 219

Query: 181 DLCRGPHVRSTG 192
           D+  GP +  T 
Sbjct: 220 DVSEGPLIPRTS 231


>gi|116180206|ref|XP_001219952.1| hypothetical protein CHGG_00731 [Chaetomium globosum CBS 148.51]
 gi|88185028|gb|EAQ92496.1| hypothetical protein CHGG_00731 [Chaetomium globosum CBS 148.51]
          Length = 562

 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 63/137 (45%), Gaps = 12/137 (8%)

Query: 286 KIKDDYEEINTPQV--LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPG 343
           +++D  E +   ++  L + LW++SG  D+  + +F      D       + L P +   
Sbjct: 53  RVQDKVERLVASRMEELLESLWEKSGRLDNVASELFRFSDRRDV-----PYLLAPTHEEE 107

Query: 344 HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE----Q 399
              +    +KSY+ELP+RL +    YR+E     HGL+R R F   D + F +      +
Sbjct: 108 ITTLAARSVKSYKELPLRLYQITRKYRDE-FRPRHGLLRGREFIMKDLYTFDSSVDSALE 166

Query: 400 MFNECLKIHNLIISIYK 416
            +N+    +N I S  K
Sbjct: 167 TYNDVRAAYNQIFSDMK 183


>gi|261867354|ref|YP_003255276.1| alanyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D11S-1]
 gi|261412686|gb|ACX82057.1| alanyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D11S-1]
          Length = 874

 Score = 46.6 bits (109), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 31/142 (21%), Positives = 62/142 (43%), Gaps = 10/142 (7%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY-YDFDKEQPFSS 116
           S+  +  E  R    + HS  H++  A++ +  E     G ++ D    +DF + +P S 
Sbjct: 546 SVNAVVDEVRRQRISLNHSATHLLHAALRQVLGEHVAQKGSLVSDALLRFDFAQHEPISK 605

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
            +LA++E+ + + +  ++P     +  E A+        A     L      + V +   
Sbjct: 606 AQLAEVERIVNQQVRANNPIKTDIMELEAAK--------AKGAMALFGEKYSDQVRVLTM 657

Query: 177 GEW-FDLCRGPHVRSTGQVKKF 197
           G++  +LC G H + TG +  F
Sbjct: 658 GDFSIELCGGIHAKRTGDIGLF 679


>gi|227497547|ref|ZP_03927775.1| proline--tRNA ligase [Actinomyces urogenitalis DSM 15434]
 gi|226833001|gb|EEH65384.1| proline--tRNA ligase [Actinomyces urogenitalis DSM 15434]
          Length = 614

 Score = 46.6 bits (109), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 40/190 (21%), Positives = 83/190 (43%), Gaps = 15/190 (7%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E   H+ L R     +I     G+  W   G  + + + + +R ++ +   +E++ P 
Sbjct: 19  DAEVASHKLLVRAS---YIRRTAPGIYTWLPLGLAVVRKIEAIVREEMNRMGGQEVHFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT--FALKPMNCPGHVAVFNHGLKSYR 356
           +L    ++ +  WD Y   +F       T++D +   + L P +      +      SY+
Sbjct: 76  LLPAEPYKATQRWDEYGPTLF-------TLQDRKGGDYLLAPTHEEMFTLLAKDMFSSYK 128

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH-NLIISIY 415
           +LP  L +  + YR+E +    GL+R R F   D++ F   +   +   + H +    I+
Sbjct: 129 DLPATLYQIQTKYRDE-ARPRAGLIRGREFIMKDSYSFDVDDAGLDASYQRHRDAYERIF 187

Query: 416 KDFGFEKIMV 425
           +  G E + V
Sbjct: 188 RRLGLEYVPV 197


>gi|284053071|ref|ZP_06383281.1| threonyl-tRNA synthetase [Arthrospira platensis str. Paraca]
          Length = 103

 Score = 46.6 bits (109), Expect = 0.014,   Method: Composition-based stats.
 Identities = 26/103 (25%), Positives = 50/103 (48%), Gaps = 4/103 (3%)

Query: 550 LSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIIC 609
           ++P+   V  ++    +YA+ I   LK  ++  E D   E +  +IR   ++KIP+ ++ 
Sbjct: 1   MAPVMVRVLVVSDRFRDYAKSIVQSLKQQNIRAEVDNTGERLGKQIRACELEKIPVTVVI 60

Query: 610 GDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           G +E   +S+ +R         ++L    P LT+E L  +  K
Sbjct: 61  GQRELDNQSLSVRTRSRGDIGTMTL----PQLTEEILKANAAK 99


>gi|310796673|gb|EFQ32134.1| prolyl-tRNA synthetase [Glomerella graminicola M1.001]
          Length = 565

 Score = 46.6 bits (109), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 78/382 (20%), Positives = 149/382 (39%), Gaps = 61/382 (15%)

Query: 275 IFQTLISYMRRKIKD-DYEEINTPQVLD-QHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           I+  +  +   +I+D   +E + P  L  + L ++  H + +   +  V  A D  KDL 
Sbjct: 100 IWTVIRKWFSERIEDMGVDETSFPMFLSSKSLEKEKDHVEGFAPELAWVTKAGD--KDLE 157

Query: 333 T-FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
              A++P +       ++  ++S+R+LP RL ++ SV R E   +    +R R F   + 
Sbjct: 158 VPVAVRPTSEAVMYPYYSKWIRSHRDLPFRLNQWNSVVRWEAKQTTP-FLRTREFLWQEG 216

Query: 392 HV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKG 450
           H    T+E    E L+I  L   +Y+      ++    T  EK                 
Sbjct: 217 HTAHLTEELAGKEVLEILELYAGVYEQLLAVPVVRGTKTENEKFA--------------- 261

Query: 451 VLDTIKNSSQDRINTGVLLGEGAFYGPKFE-YILKDAIGRDWQCGTIQVDFNLPSRFNAF 509
                                G +Y    E YI  +  GR  Q  T        S+    
Sbjct: 262 ---------------------GGYYTTTVEGYIPSN--GRGIQGATSHCLGQNFSKMFDI 298

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMI---ENFKG-NLPLWLSPIQAIVTTITSSAV 565
            V    +K   + + +  +G   R IG+M+    + KG  LP  ++ +Q ++  +  +A 
Sbjct: 299 TVEDPDKKGEKIHVWQNSWGLSTRVIGVMVMIHGDDKGLVLPPRIAKVQVVLIAVGITAK 358

Query: 566 ----------EYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEA 614
                     +   ++ N L+   +  E+D R+  T  +K  E  ++ +P+ +  G K+A
Sbjct: 359 TTPEDRKKLEDKVDDLRNELRKAGVRAESDLRDGYTPAWKFNEWELRGVPLRLEFGPKDA 418

Query: 615 SERSIGIRRFGSTTTQKVSLLD 636
           ++  +   R  +     V+L +
Sbjct: 419 AKEVVAFARRDTGEKGSVALAE 440


>gi|262375452|ref|ZP_06068685.1| alanyl-tRNA synthetase [Acinetobacter lwoffii SH145]
 gi|262309706|gb|EEY90836.1| alanyl-tRNA synthetase [Acinetobacter lwoffii SH145]
          Length = 892

 Score = 46.6 bits (109), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 38/155 (24%), Positives = 70/155 (45%), Gaps = 15/155 (9%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSS 116
           ++E     D R+     HS  H++  A++ I    VQ     +  D   +DF  +QP S 
Sbjct: 559 NVEATVKADIRAATARNHSATHLLHAALRQILGSHVQQKGSLVASDVLRFDFANDQPVSF 618

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESK-KEAYKVEILESIPAKEN 170
           ++L +IE+ +   +  ++    + L  E A+      LF  K  +  +V  + S+  ++N
Sbjct: 619 EQLQEIERLVNAEVIANTAVSTELLDIESAKAKGAMMLFGEKYGDEVRVLSMGSVIEEKN 678

Query: 171 VTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAG 205
            ++       +LC G HV+ TG +   FK+    G
Sbjct: 679 FSI-------ELCGGIHVKRTGDI-GLFKITSEGG 705


>gi|258625204|ref|ZP_05720117.1| prolyl-tRNA synthetase [Vibrio mimicus VM603]
 gi|258582494|gb|EEW07330.1| prolyl-tRNA synthetase [Vibrio mimicus VM603]
          Length = 571

 Score = 46.6 bits (109), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 65/134 (48%), Gaps = 9/134 (6%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINT--PQVLDQHLWQQSGHWDSYRANMFA 320
           SG+  W   G ++ + + + +R++I D+   I T  P V    LW+++G     R+    
Sbjct: 37  SGLYTWLPTGLRVLRKVENIVRQEI-DNAGAIETLMPVVQPFELWEETG-----RSEKMG 90

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +    T +  R F L P       A+  + + SY++LP+ L +  + +R+E      G+
Sbjct: 91  PELLRFTDRHERPFVLSPTAEEVITALVRNEVSSYKQLPLNLYQIQTKFRDERRPRF-GV 149

Query: 381 MRVRGFTQDDAHVF 394
           MR R F+  DA+ F
Sbjct: 150 MRAREFSMMDAYSF 163


>gi|237745661|ref|ZP_04576141.1| alanyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
 gi|229377012|gb|EEO27103.1| alanyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
          Length = 870

 Score = 46.6 bits (109), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 35/139 (25%), Positives = 63/139 (45%), Gaps = 10/139 (7%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKM 126
           R+  +  HS  H+M +A++ +  +     G +++ D   +DF    P + DE+ Q+E+ +
Sbjct: 552 RAQTMRNHSVTHLMHKALRQVLGQHVAQRGSLVDPDKTRFDFSHNAPVTDDEIRQVEEIV 611

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGP 186
              I  ++P   Q +S + A         A+    L      + V +   G   +LC G 
Sbjct: 612 NREIVANNPTQAQQMSFDDAI--------AHGATALFGEKYGDVVRVLDIGFSCELCGGT 663

Query: 187 HVRSTGQVKKFFKLMKVAG 205
           HV  TG +  FFK++   G
Sbjct: 664 HVSRTGDI-GFFKIVSEGG 681


>gi|121701845|ref|XP_001269187.1| prolyl-tRNA synthetase [Aspergillus clavatus NRRL 1]
 gi|119397330|gb|EAW07761.1| prolyl-tRNA synthetase [Aspergillus clavatus NRRL 1]
          Length = 553

 Score = 46.6 bits (109), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 11/124 (8%)

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           Q LW+QSG      + +F      ++      F L P +      +     KSYR+LPVR
Sbjct: 36  QELWEQSGRLKE-GSEVFRFHDRKES-----RFLLAPTHEEEITTLVGSLTKSYRDLPVR 89

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           + +    YR+E +    GL+R R F   D + F   +    E LK +NL+ + YK+  F+
Sbjct: 90  VYQISRKYRDE-ARPRQGLLRGREFMMKDLYTF---DYNVEEALKTYNLVKAAYKNL-FD 144

Query: 422 KIMV 425
           ++ +
Sbjct: 145 ELKI 148


>gi|116512579|ref|YP_811486.1| alanyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11]
 gi|123320246|sp|Q02XE9|SYA_LACLS RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|116108233|gb|ABJ73373.1| alanyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11]
          Length = 872

 Score = 46.6 bits (109), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 40/161 (24%), Positives = 77/161 (47%), Gaps = 12/161 (7%)

Query: 48  CDLSDPVREGSIEIITPEDPRSLAVIR-HSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY- 105
            + + P++ G    +  ++ R  AV++ H+  H++  A+ +I     +  G + E  F  
Sbjct: 538 VETTSPLKVGETYTLEIDEERRSAVVKNHTATHLLHAALHNIVGNHALQAGSLNEVEFLR 597

Query: 106 YDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESI 165
           +DF      + +ELA+IE+++ E+I        Q L  E       + KE   + +    
Sbjct: 598 FDFTHFAQVTKEELAEIERQVNEVIW-------QSLKVETIETDIATAKEMGAMALFGEK 650

Query: 166 PAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKFFKLMKVAG 205
             K NV + + G++  +LC G H ++T Q+   FK++K  G
Sbjct: 651 YGK-NVRVVKIGDYSIELCGGTHTQTTSQI-GLFKIIKEEG 689


>gi|209694468|ref|YP_002262396.1| prolyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
 gi|226731423|sp|B6EHZ8|SYP_ALISL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|208008419|emb|CAQ78577.1| prolyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
          Length = 571

 Score = 46.6 bits (109), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 39/163 (23%), Positives = 72/163 (44%), Gaps = 10/163 (6%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINT--PQVLDQHLWQQSGHWDSYRANMF 319
            SG+  W   G ++ + + + +R++I D+   I T  P V    LW+++G  +     + 
Sbjct: 36  ASGLYTWLPTGLRVLRKVENIVRQEI-DNAGAIETLMPVVQPFELWEETGRSEEMGPELL 94

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHG 379
                  T +  R F L P       ++  + + SY++LP+ L +  + +R+E      G
Sbjct: 95  RF-----TDRHARPFVLSPTAEEVITSLVRNEVNSYKQLPLNLYQIQTKFRDERRPRF-G 148

Query: 380 LMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFE 421
           +MR R F   DA+ F   KE +      +H+     +   G E
Sbjct: 149 VMRAREFCMMDAYSFDIDKEGLQKSYDAMHDAYCRAFDRMGLE 191


>gi|242090883|ref|XP_002441274.1| hypothetical protein SORBIDRAFT_09g023590 [Sorghum bicolor]
 gi|241946559|gb|EES19704.1| hypothetical protein SORBIDRAFT_09g023590 [Sorghum bicolor]
          Length = 508

 Score = 46.6 bits (109), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 72/302 (23%), Positives = 123/302 (40%), Gaps = 54/302 (17%)

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV- 393
           A++P +       F+  ++S+R+LP+R  ++ +V R E S      +R R F   + H  
Sbjct: 128 AIRPTSETVMYPYFSKWIRSHRDLPLRCNQWCNVVRWEFSNPTP-FIRSREFLWQEGHTA 186

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
           F TKE+   E L+I  L   IY++F    + V +S                    KG   
Sbjct: 187 FATKEEADEEVLQILELYRRIYEEF----LAVPVS--------------------KG--- 219

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVN 512
             + S  ++         G  Y    E  + +  GR  Q  T   +  N    F+  + N
Sbjct: 220 --RKSEMEKF-------AGGLYTTSVEAFIPNT-GRGIQGATSHCLGQNFAKMFDITFEN 269

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTIT-----SS 563
              EK    M+ +  +    R IG+M+     +    LP  ++PIQ IV  +      ++
Sbjct: 270 ---EKGVREMVWQNSWAYTTRSIGVMVMTHGDDKGLVLPPKVAPIQVIVIPVPYKDADTT 326

Query: 564 AVEYAQEIA-NLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
           A++ A E A   L       + D R N +  +K     +K +P+ I  G K+ + + + I
Sbjct: 327 AIKGACESAVYTLNQSGFRADLDTRENYSPGWKYSHWEMKGVPLRIEIGPKDLANKQVRI 386

Query: 622 RR 623
            R
Sbjct: 387 VR 388


>gi|196019376|ref|XP_002118967.1| hypothetical protein TRIADDRAFT_9363 [Trichoplax adhaerens]
 gi|190577501|gb|EDV18547.1| hypothetical protein TRIADDRAFT_9363 [Trichoplax adhaerens]
          Length = 408

 Score = 46.6 bits (109), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 90/399 (22%), Positives = 160/399 (40%), Gaps = 56/399 (14%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHW---DS 313
           I +  SGV  W   G  +   L + +R ++ K +  EI  P +    +W++SG       
Sbjct: 32  IKQSSSGVYSWLPLGLNVLNKLANLIRVELNKINCHEIVLPSLQLLSIWEKSGRAVEDSD 91

Query: 314 YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP 373
            ++ +F +K    T      + L P        +F   + SY+++   L +    +R+E 
Sbjct: 92  MKSQIFHIKDQKQT-----AYVLPPSGEEAVAELFKSSVHSYKDVSKILYQITWKFRDEI 146

Query: 374 SGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
               HG+MR + F   DA+ F   KE+      KI    + ++K  G   I V     P 
Sbjct: 147 RPR-HGVMRAKEFLMKDAYSFDVNKEKALISYEKIFKAYLEVFKKIGLRVIPV---LAPT 202

Query: 433 KRVGSD------ALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDA 486
             +G +       L D          + + N  +D  +   L G   FY  + E  + D 
Sbjct: 203 GAMGGNYSHEFHVLSDKNGESTIYYQEELNNYLKD--DEFSLKGYEKFYAKEEEKHVVD- 259

Query: 487 IGRDWQCGTIQVD----------FNLPSRF----NAFYVNSHSEKCHPVMIHRAVFG-SI 531
                 C T+++           F L +++    N  Y +S+ E   P M     +G  +
Sbjct: 260 -----DCKTLKIIKSKSIEVGHLFYLGTKYSKSLNCTYQDSNGELQFPEM---GCYGIGV 311

Query: 532 ERFIGIMIENF---KGNL-PLWLSPIQAIVTTIT---SSAVEYAQEI-ANLLKSHHLSIE 583
            R I  +IE+    KG + P  +SP +  +  I    S   E++ ++ ANL  S    + 
Sbjct: 312 TRLIAAIIESCHDDKGIIWPDAISPFKLAIINIKAEDSVCREFSDKLYANL--SGKYDVL 369

Query: 584 TDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
            D  N++   K  +  +  I + II G K A+ + + ++
Sbjct: 370 YDDTNKSPGKKFADMDLIGINLEIIIGPKHAANKKVELK 408


>gi|311739686|ref|ZP_07713521.1| proline--tRNA ligase [Corynebacterium pseudogenitalium ATCC 33035]
 gi|311305502|gb|EFQ81570.1| proline--tRNA ligase [Corynebacterium pseudogenitalium ATCC 33035]
          Length = 589

 Score = 46.6 bits (109), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 18/174 (10%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +  +A    GV  W   G +  + +   +R+++     +E+  P 
Sbjct: 19  DAEVPSHKLLVRAGYVRRVA---PGVYTWLPLGLRTLRKIEDVVRQEMDAIGGQEMLFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L +  ++++  W  Y  N+F +K  D    D+       +  P H  +F   +K    S
Sbjct: 76  LLPREPYEKTNRWVEYGDNLFRLK--DRKNADM-------LLGPTHEEMFASAVKDMYSS 126

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
           Y++ PV L +  + YR+E      G++R R FT  D++ F   ++  +E    H
Sbjct: 127 YKDFPVTLYQIQTKYRDEER-PRAGVLRGREFTMKDSYSFDMTDEGLDESYGRH 179


>gi|116669968|ref|YP_830901.1| prolyl-tRNA synthetase [Arthrobacter sp. FB24]
 gi|152074746|sp|A0JUT1|SYP_ARTS2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|116610077|gb|ABK02801.1| prolyl-tRNA synthetase [Arthrobacter sp. FB24]
          Length = 603

 Score = 46.6 bits (109), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 43/196 (21%), Positives = 82/196 (41%), Gaps = 19/196 (9%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   HR L R     +I     G+  W   G  + + +   +R ++     +E++ P 
Sbjct: 19  DAEVASHRLLVRA---GYIRRAAPGIYTWLPLGLSVLRKVEKVIREEMAAIGAQEVHFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L +  ++ +  W  Y   +F +K  D    D        +  P H  +F   +K    S
Sbjct: 76  LLPKEPYEATNRWTEYGEGIFRLK--DRKGGDY-------LLAPTHEEMFTLLVKDLYSS 126

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI-IS 413
           Y++LP+ + +  + YR+E      GL+R R F   D++ F   +   +     H    + 
Sbjct: 127 YKDLPLSIYQIQNKYRDEAR-PRAGLLRGREFIMKDSYSFDVDDAGLDASYNAHRAAYLK 185

Query: 414 IYKDFGFEKIMVKLST 429
           I++  G E I V  + 
Sbjct: 186 IFERLGLEVIPVAATA 201


>gi|319899070|ref|YP_004159163.1| Alanyl-tRNA synthetase [Bartonella clarridgeiae 73]
 gi|319403034|emb|CBI76589.1| Alanyl-tRNA synthetase [Bartonella clarridgeiae 73]
          Length = 887

 Score = 46.6 bits (109), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 51/214 (23%), Positives = 96/214 (44%), Gaps = 22/214 (10%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSD 117
           +E+I     R      HS  H++ EA++ I  P V      +  D   +DF   +  SS+
Sbjct: 548 VELIIDSGRRRKIRANHSATHLLHEALRRILGPHVAQKGSLVSPDRLRFDFSHPKSISSE 607

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESK----KEAYKVEI-LESIPAKENVT 172
           EL ++E    +I+ R+S      ++ + A  +FE       E Y  E+ + S+  +   T
Sbjct: 608 ELKRVEDLANDIVLRNSKVTTHLMALDDA--IFEGAMALFGEKYGDEVRVVSMGERCEPT 665

Query: 173 LYRQGEWFDLCRGPHVRSTGQVKKFFKLMK--VAGAYWRGDSNRPMLSRIYGTAWNTQQE 230
             ++    +LC G HV+ TG +     + +  +A    R ++     +R+Y +  +  + 
Sbjct: 666 ELKKRWSIELCGGTHVQRTGDIGLIHIVAESSIASGVRRIEALTGTTARLYLSKQD--KR 723

Query: 231 LTQYLYFLEES----EKR------DHRKLAREMD 254
           + +   FL+ S    E+R      D RKL +E++
Sbjct: 724 IYEIASFLKASPANVEERVRNLFDDRRKLEKELN 757


>gi|255034032|ref|YP_003084653.1| prolyl-tRNA synthetase [Dyadobacter fermentans DSM 18053]
 gi|254946788|gb|ACT91488.1| prolyl-tRNA synthetase [Dyadobacter fermentans DSM 18053]
          Length = 491

 Score = 46.6 bits (109), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 64/303 (21%), Positives = 121/303 (39%), Gaps = 58/303 (19%)

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           + + + ++SYR+LP+ + ++ +V R E    L   +R   F   + H   T      E +
Sbjct: 130 STYKNWIQSYRDLPLLINQWANVVRWEMRTRL--FLRTAEFLWQEGH---TAHATAQEAI 184

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
                ++ +Y  F  E + V                     ++KGV      ++ +R   
Sbjct: 185 AETKQMLEVYAQFAEEWMAVP--------------------VIKGV-----KTANER--- 216

Query: 466 GVLLGEGAFYGPKFEYILKDAI--GRDWQCGTIQVDFNLPSRF-NAFYVNSHSEKCHPVM 522
                   F G +  Y ++  +  G+  Q GT      L   F NAF V    ++     
Sbjct: 217 --------FAGAEDTYCIEAMMQDGKALQAGTSHF---LGQNFANAFDVKFQDKEGKLDY 265

Query: 523 IHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTITSSAVEYAQ------EIA 572
           +    +G   R +G +I     +    LP  L+PIQ ++  I  +  + AQ      EI 
Sbjct: 266 VWGTSWGVSTRLMGALIMAHSDDAGLVLPPKLAPIQVVIVPIYRNDEQLAQISEKVAEIT 325

Query: 573 NLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
             LK   +S++ D   N    +K  E+ +K +P+ +  G ++    ++ + R  + T + 
Sbjct: 326 KDLKKLGISVKYDSSDNAKPGFKFAEYELKGVPVRLAMGGRDLENGTVEVARRDTKTKET 385

Query: 632 VSL 634
           VS+
Sbjct: 386 VSV 388


>gi|325927198|ref|ZP_08188459.1| alanyl-tRNA synthetase [Xanthomonas perforans 91-118]
 gi|325542426|gb|EGD13907.1| alanyl-tRNA synthetase [Xanthomonas perforans 91-118]
          Length = 882

 Score = 46.6 bits (109), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 47/200 (23%), Positives = 80/200 (40%), Gaps = 28/200 (14%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKM 126
           R   ++ HS  H++  A++ +    VQ     +  D   +DF   QP ++DELA IE+K+
Sbjct: 563 RGKTILNHSATHLLHAALREVLGTHVQQKGSLVAPDRLRFDFSHFQPITADELAVIERKV 622

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRG 185
              +  +       ++ ++A +        +    L      ENV + + G +  +LC G
Sbjct: 623 NAEVRANHGVEVHNMAMQEALD--------FGAMALFGEKYGENVRVLKMGGYSTELCGG 674

Query: 186 PHVRSTGQVKKFFKLMKVAGAY----------------WRGDSNRPMLSRIYGTAWNTQQ 229
            HV  TG +   FK+    G                  +  D  R +L        NT  
Sbjct: 675 THVTRTGDI-GLFKITSEGGVSSGVRRIEAVTGQGALDYVADEERRLLEAANLLGGNT-S 732

Query: 230 ELTQYLYFLEESEKRDHRKL 249
           E+   +  L E +KR  R+L
Sbjct: 733 EVVDKVRALTERQKRLEREL 752


>gi|294626627|ref|ZP_06705224.1| alanyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|294665630|ref|ZP_06730907.1| alanyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|292599047|gb|EFF43187.1| alanyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292604576|gb|EFF47950.1| alanyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
          Length = 882

 Score = 46.6 bits (109), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 47/200 (23%), Positives = 80/200 (40%), Gaps = 28/200 (14%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKM 126
           R   ++ HS  H++  A++ +    VQ     +  D   +DF   QP ++DELA IE+K+
Sbjct: 563 RGKTILNHSATHLLHAALREVLGTHVQQKGSLVAPDRLRFDFSHFQPITADELAVIERKV 622

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRG 185
              +  +       ++ ++A +        +    L      ENV + + G +  +LC G
Sbjct: 623 NAEVRTNHGVEVHNMAMQEALD--------FGAMALFGEKYGENVRVLKMGGYSTELCGG 674

Query: 186 PHVRSTGQVKKFFKLMKVAGAY----------------WRGDSNRPMLSRIYGTAWNTQQ 229
            HV  TG +   FK+    G                  +  D  R +L        NT  
Sbjct: 675 THVTRTGDI-GLFKITSEGGVSSGVRRIEAVTGQGALDYVADEERRLLEAANLLGGNT-T 732

Query: 230 ELTQYLYFLEESEKRDHRKL 249
           E+   +  L E +KR  R+L
Sbjct: 733 EVVDKVRALTERQKRLEREL 752


>gi|89895167|ref|YP_518654.1| hypothetical protein DSY2421 [Desulfitobacterium hafniense Y51]
 gi|122482444|sp|Q24UT2|SYA_DESHY RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|89334615|dbj|BAE84210.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 875

 Score = 46.6 bits (109), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 33/138 (23%), Positives = 61/138 (44%), Gaps = 10/138 (7%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSD 117
           +E +  E  R      HS  H++  A++++  E VQ A   +  D   +DF      +S 
Sbjct: 547 VEALVDEHLRLATARHHSATHLLQAALRAVLGEHVQQAGSLVTPDRLRFDFTHFSALTSA 606

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           EL ++E  + E +  + P   + +S + A+        A     L      + V +   G
Sbjct: 607 ELQRVEDLLNEAVLANMPVAAEEMSLDAAK--------ASGATALFGEKYGDTVRVVSMG 658

Query: 178 EW-FDLCRGPHVRSTGQV 194
           ++  +LC G H+R+TG +
Sbjct: 659 DYSLELCGGTHIRATGDI 676


>gi|328726336|ref|XP_003248855.1| PREDICTED: probable threonyl-tRNA synthetase 2, cytoplasmic-like
           [Acyrthosiphon pisum]
          Length = 90

 Score = 46.6 bits (109), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 7/87 (8%)

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           +Y  FGF    ++LS RPEK +G   +  +AE  +   L+             + L +GA
Sbjct: 11  VYTVFGF-TFQLRLSARPEKYLGELEMLKNAEKQLADSLNLFCKP------WTLNLVDGA 63

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDF 500
           F  PK +  + +A+ R  QC TIQ+DF
Sbjct: 64  FNEPKIDITIWNALKRQHQCATIQLDF 90


>gi|262165127|ref|ZP_06032864.1| prolyl-tRNA synthetase [Vibrio mimicus VM223]
 gi|262172111|ref|ZP_06039789.1| prolyl-tRNA synthetase [Vibrio mimicus MB-451]
 gi|261893187|gb|EEY39173.1| prolyl-tRNA synthetase [Vibrio mimicus MB-451]
 gi|262024843|gb|EEY43511.1| prolyl-tRNA synthetase [Vibrio mimicus VM223]
          Length = 571

 Score = 46.6 bits (109), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 65/134 (48%), Gaps = 9/134 (6%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINT--PQVLDQHLWQQSGHWDSYRANMFA 320
           SG+  W   G ++ + + + +R++I D+   I T  P V    LW+++G     R+    
Sbjct: 37  SGLYTWLPTGLRVLRKVENIVRQEI-DNAGAIETLMPVVQPFELWEETG-----RSEKMG 90

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +    T +  R F L P       A+  + + SY++LP+ L +  + +R+E      G+
Sbjct: 91  PELLRFTDRHERPFVLSPTAEEVITALVRNEVSSYKQLPLNLYQIQTKFRDERRPRF-GV 149

Query: 381 MRVRGFTQDDAHVF 394
           MR R F+  DA+ F
Sbjct: 150 MRAREFSMMDAYSF 163


>gi|121609349|ref|YP_997156.1| prolyl-tRNA synthetase [Verminephrobacter eiseniae EF01-2]
 gi|152112961|sp|A1WKI1|SYP_VEREI RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|121553989|gb|ABM58138.1| prolyl-tRNA synthetase [Verminephrobacter eiseniae EF01-2]
          Length = 581

 Score = 46.6 bits (109), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 31/134 (23%), Positives = 63/134 (47%), Gaps = 7/134 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           G+G+  +   G ++ + + + +R ++ +    E+  P V    LWQ++G +D     +  
Sbjct: 36  GAGIYSYMPMGLRVLRKIEAIVREEMNRAGAVELTMPVVQPAELWQETGRFDKMGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           ++      +  R F ++P +      +    L+SY++LP    +  + +R+E      GL
Sbjct: 96  IQD-----RHGRDFVVQPTSEEVITDIARQELRSYKQLPKNFYQIQTKFRDERRPRF-GL 149

Query: 381 MRVRGFTQDDAHVF 394
           MR R F   DA+ F
Sbjct: 150 MRGREFIMKDAYSF 163


>gi|312884352|ref|ZP_07744060.1| prolyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309367982|gb|EFP95526.1| prolyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 571

 Score = 46.2 bits (108), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 33/133 (24%), Positives = 63/133 (47%), Gaps = 7/133 (5%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG+  W   G ++ + + + +R++I +    E   P V    LW+++G  +   A +  +
Sbjct: 37  SGLYTWLPSGLRVLRKVENIVRQEINNAGAVETLMPVVQPFELWEETGRSEKMGAELLRL 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
               D     R F L P       ++  + + SY++LP+ L +  + +R+E      G+M
Sbjct: 97  NDRHD-----RPFVLSPTAEEVITSLVRNEVSSYKQLPLNLYQIQTKFRDERRPRF-GVM 150

Query: 382 RVRGFTQDDAHVF 394
           R R F+  DA+ F
Sbjct: 151 RSREFSMMDAYSF 163


>gi|260784157|ref|XP_002587135.1| hypothetical protein BRAFLDRAFT_102224 [Branchiostoma floridae]
 gi|229272273|gb|EEN43146.1| hypothetical protein BRAFLDRAFT_102224 [Branchiostoma floridae]
          Length = 326

 Score = 46.2 bits (108), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 53/222 (23%), Positives = 98/222 (44%), Gaps = 18/222 (8%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIR---HS 76
           +T    A  IS +  K +V   +NG+  D+  P+ E   +  +   D       +    S
Sbjct: 76  STPYHCAMHISETYTKYSVLAMVNGEPWDMWRPLTEDCELSFVRFRDKHPEEANKSYWRS 135

Query: 77  CAHIMAEAVQSIWPE---VQVAIG---PIIEDGFYYDFD---KEQPFSSDELAQIEKKMQ 127
           CA I+   +++ + +   VQ+A     PII+  F YD D   K+   +++ L  +     
Sbjct: 136 CALILGAVMETAFKDTIYVQLARALELPIIKGMFVYDVDLGLKDWTPTNENLRSLSLSAI 195

Query: 128 EIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPH 187
            + ++D PF +  +    A  LF+  +  YK   +E       VTLYR G++ D+  GP 
Sbjct: 196 TMKSKDLPFERLEVDPSLALRLFQHNE--YKQREVEERVRGGRVTLYRMGKFIDIHDGPM 253

Query: 188 VRSTGQVKKFF--KLMKVAGAYWRGDS-NRPMLSRIYGTAWN 226
           +  +  V  F    + ++ G  +R  + + P    ++ + WN
Sbjct: 254 MSKSSLVSMFTVAGIHELPGGLYRVQAISLPHDFYLHSSVWN 295


>gi|260591299|ref|ZP_05856757.1| alanine--tRNA ligase [Prevotella veroralis F0319]
 gi|260536665|gb|EEX19282.1| alanine--tRNA ligase [Prevotella veroralis F0319]
          Length = 888

 Score = 46.2 bits (108), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 9/137 (6%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEK 124
           D R  +   H+  H++  A++ +  E     G  +  D   +D    Q  + +EL Q+EK
Sbjct: 569 DKRDASAANHTATHLLDYALKQVLGEHAEQKGSYVSPDTLRFDVSHFQKITDEELRQVEK 628

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
            + E+I +D P        E      E  KE   V +       + V + R G   + C 
Sbjct: 629 LVNEMIRKDYPL------DEHRDTPMEEAKEMGAVALFGE-KYGDKVRVVRFGPSCEFCG 681

Query: 185 GPHVRSTGQVKKFFKLM 201
           G H +STG++  FFK++
Sbjct: 682 GIHAKSTGRI-GFFKIV 697


>gi|217033470|ref|ZP_03438900.1| hypothetical protein HP9810_1g84 [Helicobacter pylori 98-10]
 gi|216944175|gb|EEC23603.1| hypothetical protein HP9810_1g84 [Helicobacter pylori 98-10]
          Length = 577

 Score = 46.2 bits (108), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 42/180 (23%), Positives = 76/180 (42%), Gaps = 11/180 (6%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           + H+ LA+   ++ +   GSG+  +     K+   + +   +++++   + I    V+  
Sbjct: 21  KSHKHLAQAGYIYQV---GSGIYNFLPLAKKVLDKIENITHKRMQEHGAQNILMSFVVLA 77

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SG  D Y   +   K   D       F L P        +  + +KSY++L V L
Sbjct: 78  SLWEKSGRLDKYGKELLVFKDRKDN-----DFVLSPTLEENITEIAANFIKSYKQLSVHL 132

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT-KEQMFNECLKIHNLIISIYKDFGFE 421
            +  + +R+E      GL+R R F   D + F    E +  E L   N    I  D G +
Sbjct: 133 YQIHTKFRDEIRPRF-GLVRAREFIMKDGYSFHEDAESLDKEFLNTQNAYKEILSDLGLD 191


>gi|255325212|ref|ZP_05366318.1| proline--tRNA ligase [Corynebacterium tuberculostearicum SK141]
 gi|255297777|gb|EET77088.1| proline--tRNA ligase [Corynebacterium tuberculostearicum SK141]
          Length = 589

 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 18/174 (10%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +  +A    GV  W   G +  + +   +R+++     +E+  P 
Sbjct: 19  DAEVPSHKLLVRAGYVRRVA---PGVYTWLPLGLRTLRKIEDVVRQEMDAIGGQEMLFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L +  ++++  W  Y  N+F +K  D    D+       +  P H  +F   +K    S
Sbjct: 76  LLPREPYEKTNRWVEYGDNLFRLK--DRKNADM-------LLGPTHEEMFASAVKDMYSS 126

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
           Y++ PV L +  + YR+E      G++R R FT  D++ F   ++  +E    H
Sbjct: 127 YKDFPVTLYQIQTKYRDEER-PRAGVLRGREFTMKDSYSFDMTDEGLDESYGRH 179


>gi|228470921|ref|ZP_04055766.1| alanyl-tRNA synthetase [Porphyromonas uenonis 60-3]
 gi|228307318|gb|EEK16332.1| alanyl-tRNA synthetase [Porphyromonas uenonis 60-3]
          Length = 872

 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 42/185 (22%), Positives = 80/185 (43%), Gaps = 25/185 (13%)

Query: 34  LAKKAVAVAINGKVCDLSDPVREGSIEI----ITPEDP------------RSLAVIRHSC 77
           +  K V +A +G    + D  RE ++ +      P DP            R L    H+ 
Sbjct: 508 VGDKGVLIAQDGTEYPILDTKRENNLTVHILSTLPADPKQPLIARVGAELRHLTEANHTA 567

Query: 78  AHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPF 136
            H+M  A++++        G ++  D   +DF   +  + +E+A++E+ +   I  D P 
Sbjct: 568 THLMHHALRAVLGTHVEQKGSLVSADLLRFDFSHFKKVTPEEIAEVERLVNAEIRADRP- 626

Query: 137 LKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKK 196
                  ++ R +  ++ +      L      + V + + G+  +LC G HV STGQ+  
Sbjct: 627 ------RDEHRNVPIAQAKEMGAMALFGEKYGDEVRVIKYGDSVELCGGTHVASTGQI-G 679

Query: 197 FFKLM 201
           FFK++
Sbjct: 680 FFKII 684


>gi|303557|dbj|BAA03654.1| DrpA protein [Escherichia coli W3110]
          Length = 155

 Score = 46.2 bits (108), Expect = 0.016,   Method: Composition-based stats.
 Identities = 32/126 (25%), Positives = 61/126 (48%), Gaps = 7/126 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG+  W   G ++ + + + +R ++ +    E++ P V    LWQ+SG W+ Y   +  
Sbjct: 36  ASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGRWEQYGPEL-- 93

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           ++  D   +  R F L P +      +  + L SY++LP+   +  + +R+E      G+
Sbjct: 94  LRFVD---RGERPFVLGPTHEEVITDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRF-GV 149

Query: 381 MRVRGF 386
           MR R F
Sbjct: 150 MRSREF 155


>gi|21242491|ref|NP_642073.1| alanyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str. 306]
 gi|24418694|sp|Q8PLQ0|SYA_XANAC RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|21107940|gb|AAM36609.1| alanyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str. 306]
          Length = 882

 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 47/200 (23%), Positives = 80/200 (40%), Gaps = 28/200 (14%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKM 126
           R   ++ HS  H++  A++ +    VQ     +  D   +DF   QP ++DELA IE+K+
Sbjct: 563 RGKTILNHSATHLLHAALREVLGTHVQQKGSLVAPDRLRFDFSHFQPITADELAVIERKV 622

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRG 185
              +  +       ++ ++A +        +    L      ENV + + G +  +LC G
Sbjct: 623 NAEVRTNHGVEVHNMAMQEALD--------FGAMALFGEKYGENVRVLKMGGYSTELCGG 674

Query: 186 PHVRSTGQVKKFFKLMKVAGAY----------------WRGDSNRPMLSRIYGTAWNTQQ 229
            HV  TG +   FK+    G                  +  D  R +L        NT  
Sbjct: 675 THVTRTGDI-GLFKITSEGGVSSGVRRIEAVTGQGALDYVADEERRLLEAANLLGGNT-T 732

Query: 230 ELTQYLYFLEESEKRDHRKL 249
           E+   +  L E +KR  R+L
Sbjct: 733 EVVDKVRALTERQKRLEREL 752


>gi|293390902|ref|ZP_06635236.1| alanyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D7S-1]
 gi|290951436|gb|EFE01555.1| alanyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D7S-1]
          Length = 874

 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 31/142 (21%), Positives = 62/142 (43%), Gaps = 10/142 (7%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY-YDFDKEQPFSS 116
           S+  +  E  R    + HS  H++  A++ +  E     G ++ D    +DF + +P S 
Sbjct: 546 SVNAVVDEVRRQHISLNHSATHLLHAALRQVLGEHVAQKGSLVSDALLRFDFAQHEPISK 605

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
            +LA++E+ + + +  ++P     +  E A+        A     L      + V +   
Sbjct: 606 AQLAEVERIVNQQVRANNPIKTDIMELEAAK--------AKGAMALFGEKYSDQVRVLTM 657

Query: 177 GEW-FDLCRGPHVRSTGQVKKF 197
           G++  +LC G H + TG +  F
Sbjct: 658 GDFSIELCGGIHAKRTGDIGLF 679


>gi|317181547|dbj|BAJ59331.1| prolyl-tRNA synthetase [Helicobacter pylori F57]
          Length = 577

 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 36/152 (23%), Positives = 68/152 (44%), Gaps = 10/152 (6%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           + H+ LA+   ++ +   GSG+  +     K+   + +   +++++   + I    V+  
Sbjct: 21  KSHKHLAQAGYIYQV---GSGIYNFLPLAKKVLDKIENITHKRMQEHGAQNILMSFVVLA 77

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SG  D Y   +   K   D       F L P        +  + +KSY++LPV L
Sbjct: 78  SLWEKSGRLDKYGKELLVFKDRKDN-----DFVLSPTLEENITEIAANFIKSYKQLPVHL 132

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
            +  + +R+E      GL+R R F   D + F
Sbjct: 133 YQIHTKFRDEIRPRF-GLVRAREFIMKDGYSF 163


>gi|109947885|ref|YP_665113.1| prolyl-tRNA synthetase [Helicobacter acinonychis str. Sheeba]
 gi|123173273|sp|Q17W62|SYP_HELAH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|109715106|emb|CAK00114.1| proS [Helicobacter acinonychis str. Sheeba]
          Length = 577

 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 78/180 (43%), Gaps = 11/180 (6%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           + H+ LA+   ++ I   GSG+  +     K+   + +   +++++   + I    V+  
Sbjct: 21  KSHKHLAQAGYIYQI---GSGIYNFLPLAKKVLDKIENITHKRMQEHGAQNILMSFVVLA 77

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SG  D Y   +   K  D    D   F L P        +  + +KSY++LPV L
Sbjct: 78  SLWEKSGRLDKYGKELLVFK--DRKGND---FVLSPTLEENITEIAANFIKSYKQLPVHL 132

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT-KEQMFNECLKIHNLIISIYKDFGFE 421
            +  + +R+E      GL+R R F   D + F    E +  E L   +    I  D G +
Sbjct: 133 YQIHTKFRDEIRPRF-GLVRAREFIMKDGYSFHEDAESLDKEFLNTQSAYKEILNDLGLD 191


>gi|166712451|ref|ZP_02243658.1| alanyl-tRNA synthetase [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 882

 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 46/200 (23%), Positives = 80/200 (40%), Gaps = 28/200 (14%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKM 126
           R   ++ HS  H++  A++ +    VQ     +  D   +DF   QP ++DELA IE+K+
Sbjct: 563 RGKTILNHSATHLLHAALRDVLGTHVQQKGSLVAPDRLRFDFSHFQPITADELAVIERKV 622

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRG 185
              +  +       ++ ++A +        +    L      ENV + + G +  +LC G
Sbjct: 623 NAEVRTNHGVEVHNMAMQEALD--------FGAMALFGEKYGENVRVLKMGGYSTELCGG 674

Query: 186 PHVRSTGQVKKFFKLMKVAGAY----------------WRGDSNRPMLSRIYGTAWNTQQ 229
            HV  TG +   FK+    G                  +  D  R +L   +    N   
Sbjct: 675 THVTRTGDI-GLFKITSEGGVSSGVRRIEAVTGQGALDYVADEERRLLEAAHLLGGNA-T 732

Query: 230 ELTQYLYFLEESEKRDHRKL 249
           E+   +  L E +KR  R+L
Sbjct: 733 EVVDKVRALTERQKRLEREL 752


>gi|195328763|ref|XP_002031081.1| GM24223 [Drosophila sechellia]
 gi|194120024|gb|EDW42067.1| GM24223 [Drosophila sechellia]
          Length = 417

 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 53/233 (22%), Positives = 100/233 (42%), Gaps = 23/233 (9%)

Query: 229 QELTQYLY--FLEESEKRDHRKLAREMDLFHIAEDG--SGVIFWHRKGW--KIFQTLISY 282
           +EL QY++     +S  ++  +LAR ++L+ +   G  +G   ++  G    + Q +I Y
Sbjct: 101 RELAQYVHRQLPPQSSLKEFSELARALNLYRMDHLGNYTGHKSYYLTGQLATLEQAIIQY 160

Query: 283 MRRKIKD-DYEEINTPQVLDQHLWQQSG-HWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
             + + D  ++ I+ P +L + + +  G   +  R  ++ +   +  +      AL    
Sbjct: 161 ALQAVTDHGFKLISVPDILPKEVIESCGMRTEGERTQVYKLDTGE-CLSGTSEMAL---- 215

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG--SLHGLMRVRGFTQDDAHVFCTKE 398
                  F + L S  +LP+++      YR E SG     G+ RV  F + +    CT E
Sbjct: 216 ----AGFFANKLLSEDQLPLKVTAVSRCYRAETSGLQEEKGIYRVHQFNKVEMFAICTAE 271

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWD-DAENIMKG 450
           Q   E  +  N+ I +++  G      +L   P   +G+ A    D E  M G
Sbjct: 272 QSEAELEEFKNIEIDLFRRLGLN---FRLLDMPPCELGAPAYQKYDIEAWMPG 321


>gi|291277468|ref|YP_003517240.1| prolyl-tRNA synthetase [Helicobacter mustelae 12198]
 gi|290964662|emb|CBG40517.1| prolyl-tRNA synthetase [Helicobacter mustelae 12198]
          Length = 577

 Score = 46.2 bits (108), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 71/168 (42%), Gaps = 12/168 (7%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRA 316
           I + GSG+  +   G K+ + +   +R ++ +    E+    V+   LW+QSG ++ Y  
Sbjct: 32  IEQIGSGIYNFLPLGKKVLEKISQIIREEMNEAGALEMAAGFVVPSELWKQSGRYEKYGK 91

Query: 317 NMFAVKCADDTIKDLR--TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
            +          KD R   F L P        +  + +KSY+ LP+   +    +R+E  
Sbjct: 92  ELL-------RFKDRRENEFVLGPTCEEALTNLAKNLIKSYKSLPLNFYQIHLKFRDEVR 144

Query: 375 GSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFE 421
               GLMR R F   DA+ F    E +  E   +H     I+   G +
Sbjct: 145 PRF-GLMRGREFIMKDAYSFHANFEDLDREFENMHQAYCRIFTRLGLD 191


>gi|114566020|ref|YP_753174.1| alanyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|122318869|sp|Q0AZQ1|SYA_SYNWW RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|114336955|gb|ABI67803.1| alanyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 880

 Score = 46.2 bits (108), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 66/139 (47%), Gaps = 17/139 (12%)

Query: 65  EDPRSLAVIR-HSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSDELAQI 122
           +DP  +   R H+  H++  A++ +  E     G ++E     +DF   +  SS+EL++I
Sbjct: 556 DDPARMDTARNHTATHLLHRALREVLGEHAQQKGSLVEPARLRFDFSHLKALSSEELSRI 615

Query: 123 EKKMQEIIARDSPFLKQYLSHEKAREL----FESKKEAYKVEILESIPAKENVTLYRQGE 178
           E+ + E I +  P      +  +ARE+       +K   +V +++       V  Y    
Sbjct: 616 EQMVNEAIWKLYPVTTTVTALGQAREMGAMALFGEKYGEEVRVVQ-------VDTYSS-- 666

Query: 179 WFDLCRGPHVRSTGQVKKF 197
             +LC G HV++TGQ+  F
Sbjct: 667 --ELCGGTHVQNTGQIGLF 683


>gi|121593268|ref|YP_985164.1| prolyl-tRNA synthetase [Acidovorax sp. JS42]
 gi|222109990|ref|YP_002552254.1| prolyl-tRNA synthetase [Acidovorax ebreus TPSY]
 gi|152074743|sp|A1W4B3|SYP_ACISJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|254782898|sp|B9ME00|SYP_DIAST RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|120605348|gb|ABM41088.1| prolyl-tRNA synthetase [Acidovorax sp. JS42]
 gi|221729434|gb|ACM32254.1| prolyl-tRNA synthetase [Acidovorax ebreus TPSY]
          Length = 581

 Score = 46.2 bits (108), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 32/134 (23%), Positives = 62/134 (46%), Gaps = 7/134 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           G+G+  +   G ++ + + + +R ++ +    E   P V    LWQ++G +D     +  
Sbjct: 36  GAGIYNYMPMGLRVIRKVEAIVREEMNRAGAVECTMPVVQPAELWQETGRFDKMGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +       +  R F ++P +      +    L+SY++LP  L +  + +R+E      GL
Sbjct: 96  IHD-----RHGRDFVIQPTSEEVVTDIARQELRSYKQLPKNLYQIQTKFRDERRPRF-GL 149

Query: 381 MRVRGFTQDDAHVF 394
           MR R F   DA+ F
Sbjct: 150 MRGREFIMKDAYSF 163


>gi|58582562|ref|YP_201578.1| alanyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84624448|ref|YP_451820.1| alanyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|188575923|ref|YP_001912852.1| alanyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|75434894|sp|Q5GYM8|SYA_XANOR RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|123521587|sp|Q2P1N1|SYA_XANOM RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|205830287|sp|B2SUD0|SYA_XANOP RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|58427156|gb|AAW76193.1| alanyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84368388|dbj|BAE69546.1| alanyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|188520375|gb|ACD58320.1| alanyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 882

 Score = 46.2 bits (108), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 46/200 (23%), Positives = 80/200 (40%), Gaps = 28/200 (14%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKM 126
           R   ++ HS  H++  A++ +    VQ     +  D   +DF   QP ++DELA IE+K+
Sbjct: 563 RGKTILNHSATHLLHAALREVLGTHVQQKGSLVAPDRLRFDFSHFQPITADELAVIERKV 622

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRG 185
              +  +       ++ ++A +        +    L      ENV + + G +  +LC G
Sbjct: 623 NAEVRTNHGVEVHNMAMQEALD--------FGAMALFGEKYGENVRVLKMGGYSTELCGG 674

Query: 186 PHVRSTGQVKKFFKLMKVAGAY----------------WRGDSNRPMLSRIYGTAWNTQQ 229
            HV  TG +   FK+    G                  +  D  R +L   +    N   
Sbjct: 675 THVTRTGDI-GLFKITSEGGVSSGVRRIEAVTGQGALDYVADEERRLLEAAHLLGGNA-T 732

Query: 230 ELTQYLYFLEESEKRDHRKL 249
           E+   +  L E +KR  R+L
Sbjct: 733 EVVDKVRALTERQKRLQREL 752


>gi|218258477|ref|ZP_03474844.1| hypothetical protein PRABACTJOHN_00499 [Parabacteroides johnsonii
           DSM 18315]
 gi|218225449|gb|EEC98099.1| hypothetical protein PRABACTJOHN_00499 [Parabacteroides johnsonii
           DSM 18315]
          Length = 555

 Score = 46.2 bits (108), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 41/190 (21%), Positives = 77/190 (40%), Gaps = 6/190 (3%)

Query: 11  DGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRS 69
           + + K  P+ ++  D+   +   L  + +   +N K   L+        +E +       
Sbjct: 12  NNTYKEVPIGSSLLDIYSLVGAPLRLRPMNAQVNNKTEGLTFRCWHPKDVEYVDYSGLSG 71

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           +     S  HI ++AV  + P   + +   I  G+Y      +    + + +I+K+M+EI
Sbjct: 72  MRTYVRSLCHIFSKAVNDVLPSATLNLEHPISKGYYCVIHNGKDIDEETIGKIKKRMREI 131

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILES--IPAKENVTLYRQGEWFDLCRGPH 187
           I  D PF  + +    A  LF  +    K  ++ES  +P      L     +F  C  P 
Sbjct: 132 IDADLPFHLKTVRTVDAAVLFRERGMNDKARLIESAGMPYTSYYELDGYINYFYGCLTP- 190

Query: 188 VRSTGQVKKF 197
             STG ++ F
Sbjct: 191 --STGYIQHF 198


>gi|332528434|ref|ZP_08404426.1| prolyl-tRNA synthetase [Hylemonella gracilis ATCC 19624]
 gi|332042113|gb|EGI78447.1| prolyl-tRNA synthetase [Hylemonella gracilis ATCC 19624]
          Length = 581

 Score = 46.2 bits (108), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 30/134 (22%), Positives = 62/134 (46%), Gaps = 7/134 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           G+G+  +   G ++   + + +R ++ +    E+  P +    LWQ++G ++     +  
Sbjct: 36  GAGIYTYMPMGLRVINKVAAIVREEMNRAGAIELTMPVIQPAELWQETGRFEKMGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           ++   +     R F ++P +      +     KSY++LP  L +  + +R+E      GL
Sbjct: 96  IQDRHE-----RDFVVQPTSEEVVTDIARQEFKSYKQLPRNLYQIQTKFRDERRPRF-GL 149

Query: 381 MRVRGFTQDDAHVF 394
           MR R F   DA+ F
Sbjct: 150 MRGREFIMKDAYSF 163


>gi|304314752|ref|YP_003849899.1| prolyl-tRNA synthetase [Methanothermobacter marburgensis str.
           Marburg]
 gi|302588211|gb|ADL58586.1| prolyl-tRNA synthetase [Methanothermobacter marburgensis str.
           Marburg]
          Length = 465

 Score = 46.2 bits (108), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 79/390 (20%), Positives = 155/390 (39%), Gaps = 62/390 (15%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVL-DQHLWQQSGHWDSYRANMFAVK 322
           G+  W   G++I +  ++ ++R +  D+EE+  P ++ +  L +++ H   +   ++ V 
Sbjct: 26  GMHVWMPHGFRIRKNTLNILKRILDRDHEEVLFPLLVPEDELAKEAIHVKGFEDEVYWVT 85

Query: 323 CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMR 382
               + K  R  AL+P +      +F   ++S+ +LP+R  +  + +R E   +   L+R
Sbjct: 86  HGGLS-KLQRKLALRPTSETVMYPMFALWVRSHTDLPMRFYQIVNTFRYETKHT-RPLIR 143

Query: 383 VRGFTQ-DDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK--LSTRPEKRVGSDA 439
           VR  T   +AH   T     +E  +     I IY++F F+ + +   ++ RP        
Sbjct: 144 VREITTFKEAH---TIHATADEAEEQVERAIEIYREF-FDSLGIPYLITKRPP------- 192

Query: 440 LWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVD 499
            WD                             G+ Y   F+ ++ D  G+  Q GT+   
Sbjct: 193 -WDKF--------------------------PGSDYTMAFDTLMPD--GKTLQIGTVH-- 221

Query: 500 FNLPSRF-NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP------ 552
            NL   F   F +   + +     +H+  +G  +R I  +I        L L P      
Sbjct: 222 -NLGQTFARTFEIKFENPEGEHEYVHQTCYGLSDRVIASVIAVHGDESGLCLPPEVAAHQ 280

Query: 553 ---IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIIC 609
              +  I        +E  +++ + L      +  D R+     K  E  ++ +P+ +  
Sbjct: 281 VVIVPVIFKKAADEVMEACRDLRDSLGDAGFRVHLDDRDLRAGRKYYEWEMRGVPLRVEI 340

Query: 610 GDKEASERSIGIRRFGSTTTQKVSL-LDAI 638
           G ++    S  I R    T +K++  LD I
Sbjct: 341 GPRDLENNSAVISR--RDTGEKITADLDGI 368


>gi|291563232|emb|CBL42048.1| alanyl-tRNA synthetase [butyrate-producing bacterium SS3/4]
          Length = 884

 Score = 46.2 bits (108), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 70/150 (46%), Gaps = 11/150 (7%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSS 116
           ++ +   E+ RSL    HS  H++ +A++++    V+ A   +  D   +DF      S 
Sbjct: 554 TVTLKVNEENRSLIGRNHSATHLLHKALRTVLGTHVEQAGSLVTRDRLRFDFTHFSAMSQ 613

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
           DE+ ++E  + + I    P +   +S E A      KK        E    K  V + R 
Sbjct: 614 DEIKEVENIVNKEIRAALPVVTDVMSLEDA------KKTGAMALFGEKYGDK--VRVVRM 665

Query: 177 GEW-FDLCRGPHVRSTGQVKKFFKLMKVAG 205
           G++  +LC G HV++T ++   FK++  AG
Sbjct: 666 GDFSTELCGGTHVKNTSEI-SCFKILSEAG 694


>gi|259418847|ref|ZP_05742764.1| alanyl-tRNA synthetase [Silicibacter sp. TrichCH4B]
 gi|259345069|gb|EEW56923.1| alanyl-tRNA synthetase [Silicibacter sp. TrichCH4B]
          Length = 903

 Score = 46.2 bits (108), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 33/138 (23%), Positives = 62/138 (44%), Gaps = 5/138 (3%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPI-IEDGFYYDFDKEQPFSSDELAQIEKKM 126
           RS     HS  H++ EA+++   E     G +   +   +DF   +  S ++L +I  ++
Sbjct: 574 RSQIRANHSATHLLHEALRNALGEHVAQKGSLNAAERLRFDFSHNKAVSQEDLTKIASEV 633

Query: 127 QEIIARDSPFLKQYLSHEKARELFESK--KEAYKVEILESIPAKENVTLYRQGEWF--DL 182
            + I ++SP   + ++ + AR L       E Y  E+      + +      G+ +  +L
Sbjct: 634 NDFIRQNSPVSTRIMTPDDARALGAQALFGEKYGEEVRVVSMGRADTGKGADGDTYSIEL 693

Query: 183 CRGPHVRSTGQVKKFFKL 200
           C G HV+ TG +  F  L
Sbjct: 694 CGGTHVKQTGDIGTFVIL 711


>gi|195113975|ref|XP_002001543.1| GI10857 [Drosophila mojavensis]
 gi|193918137|gb|EDW17004.1| GI10857 [Drosophila mojavensis]
          Length = 407

 Score = 46.2 bits (108), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 58/238 (24%), Positives = 106/238 (44%), Gaps = 29/238 (12%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDG--SGVIFWHRKGW--KIFQTLIS 281
           N   EL ++ + L+    ++  +LAR ++L+ +   G  +G   ++  G    + Q +I 
Sbjct: 86  NKAMELAKFEHRLQPERAKEFSELARTLNLYRMEHLGNYTGHKSYYLMGQLAMLEQAIIQ 145

Query: 282 YMRRKI-KDDYEEINTPQVLDQHLWQQSG-HWDSYRANMFAV---KCADDTIKDLRTFAL 336
           Y  + + ++ +  I+ P +L + + +  G   +  R  ++ +   +C   T         
Sbjct: 146 YALKSLTRNKFNLISVPDLLPRGIIESCGMRTEGERTQVYKLDIGECLSGT--------- 196

Query: 337 KPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLH---GLMRVRGFTQDDAHV 393
             M   G+ A  N  L + RELP+++A     YR E SG LH   G+ RV  FT+ +   
Sbjct: 197 SEMALAGYFA--NRQL-TERELPLKVAAVSRCYRAETSG-LHEEKGIYRVHQFTKVEMFA 252

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWD-DAENIMKG 450
             T +Q      ++ N+ I ++K  G   I  +L   P   +G+ A    D E  M G
Sbjct: 253 IATADQSEPTLEELKNIEIDLFKQLG---INFRLLDMPPCELGAPAYQKYDIEAWMPG 307


>gi|160890380|ref|ZP_02071383.1| hypothetical protein BACUNI_02821 [Bacteroides uniformis ATCC 8492]
 gi|270296935|ref|ZP_06203134.1| prolyl-tRNA synthetase [Bacteroides sp. D20]
 gi|317479089|ref|ZP_07938230.1| prolyl-tRNA synthetase [Bacteroides sp. 4_1_36]
 gi|156860112|gb|EDO53543.1| hypothetical protein BACUNI_02821 [Bacteroides uniformis ATCC 8492]
 gi|270272922|gb|EFA18785.1| prolyl-tRNA synthetase [Bacteroides sp. D20]
 gi|316904745|gb|EFV26558.1| prolyl-tRNA synthetase [Bacteroides sp. 4_1_36]
          Length = 497

 Score = 46.2 bits (108), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 66/289 (22%), Positives = 126/289 (43%), Gaps = 56/289 (19%)

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLK 406
           + + + SYR+LP+   ++ +V+R E    L   +R   F   + H    T+E+   E +K
Sbjct: 135 YKNWINSYRDLPILCNQWANVFRWEMRTRL--FLRTAEFLWQEGHTAHATREEAEEEAVK 192

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           + N    +Y +F  EK M                   A  ++KGV      S+ +R    
Sbjct: 193 MLN----VYAEFA-EKYM-------------------AVPVVKGV-----KSANERF--- 220

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
                GA      E +++D  G+  Q GT   +  N    F+  +VN  ++  +   +  
Sbjct: 221 ----AGALNTYTIEAMMQD--GKALQSGTSHFLGQNFAKAFDVQFVNKENKLEY---VWA 271

Query: 526 AVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTITSSAVEYA---QEIANL---L 575
             +G   R +G +I     +    LP  L+PIQ ++  I  +A   A   +++A +   L
Sbjct: 272 TSWGVSTRLMGALIMTHSDDNGLVLPPHLAPIQVVIVPIYKNAEMLAKIDEKVAGIVAKL 331

Query: 576 KSHHLSIETD-FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRR 623
           KS  +S++ D   N+   +K  ++ +K +P+ ++ G ++    ++ I R
Sbjct: 332 KSMGISVKYDNADNKRPGFKFADYEVKGVPVRLVMGGRDLENNTMEIMR 380


>gi|269101961|ref|ZP_06154658.1| prolyl-tRNA synthetase [Photobacterium damselae subsp. damselae CIP
           102761]
 gi|268161859|gb|EEZ40355.1| prolyl-tRNA synthetase [Photobacterium damselae subsp. damselae CIP
           102761]
          Length = 572

 Score = 46.2 bits (108), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 39/163 (23%), Positives = 73/163 (44%), Gaps = 10/163 (6%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINT--PQVLDQHLWQQSGHWDSYRANMF 319
            SG+  W   G ++ + + + +R++I D+   + T  P V    LW+++G     R+   
Sbjct: 36  ASGLYTWLPTGLRVLRKVENIVRQEI-DNAGAVETLMPVVQPFELWEETG-----RSEKM 89

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHG 379
             +    T +  R F L P       ++  + + SY++LP+ L +  + +R+E      G
Sbjct: 90  GPELLRFTDRHARPFVLSPTAEEVITSLVRNEVSSYKQLPLNLYQIQTKFRDERRPRF-G 148

Query: 380 LMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFE 421
           +MR R F   DA+ F   KE +      +H+     +   G E
Sbjct: 149 VMRAREFCMMDAYSFDIDKEGLQKSYDAMHDAYCKAFDRMGLE 191


>gi|260775255|ref|ZP_05884152.1| prolyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
 gi|260608436|gb|EEX34601.1| prolyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
          Length = 571

 Score = 46.2 bits (108), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 39/162 (24%), Positives = 73/162 (45%), Gaps = 10/162 (6%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINT--PQVLDQHLWQQSGHWDSYRANMFA 320
           SG+  W   G ++ + + + +R++I D+   + T  P V    LW+++G     R+    
Sbjct: 37  SGLYTWLPTGLRVLRKVENIVRQEI-DNAGAVETLMPVVQPFELWEETG-----RSEKMG 90

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +    T +  R F L P       ++  + + SY++LP+ L +  + +R+E      G+
Sbjct: 91  PELLRFTDRHTRPFVLSPTAEEVITSLVRNEVSSYKQLPLNLYQIQTKFRDERRPRF-GV 149

Query: 381 MRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFE 421
           MR R F   DA+ F   KE +      +H+     +   G E
Sbjct: 150 MRAREFCMMDAYSFDIDKEGLQKSYDAMHDAYCKAFDRMGLE 191


>gi|149246389|ref|XP_001527664.1| prolyl-tRNA synthetase [Lodderomyces elongisporus NRRL YB-4239]
 gi|146447618|gb|EDK42006.1| prolyl-tRNA synthetase [Lodderomyces elongisporus NRRL YB-4239]
          Length = 557

 Score = 46.2 bits (108), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 73/166 (43%), Gaps = 20/166 (12%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG++ W + G  I   +   +R  +    YEE+    +  ++LW Q+G W  ++ ++F +
Sbjct: 39  SGLVHWGKTGLLIQDKINGIVRENLDHLGYEELKLSLLSHKNLWLQTGRW--HQPDLFKL 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE--PSGSLHG 379
           +  +        + L P             ++SY+ LPV   +    +R E  P G   G
Sbjct: 97  QNDE--------YLLAPTAEEEITEYVKRSIQSYKHLPVGYYQINEKFRAEKRPRG---G 145

Query: 380 LMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
           L+R R F   DA+ F   E      LK +  +++ Y +  F +I V
Sbjct: 146 LLRGREFLMKDAYSFDIDE---TSALKTYESMVNAYHNI-FREIGV 187


>gi|225377425|ref|ZP_03754646.1| hypothetical protein ROSEINA2194_03073 [Roseburia inulinivorans DSM
           16841]
 gi|225210771|gb|EEG93125.1| hypothetical protein ROSEINA2194_03073 [Roseburia inulinivorans DSM
           16841]
          Length = 575

 Score = 46.2 bits (108), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 58/126 (46%), Gaps = 10/126 (7%)

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
           D +E+  P V+   LWQ+SG +DS    +        T ++     L   +    V +  
Sbjct: 65  DGQEVQFPVVMPASLWQESGRYDSIGKELLRF-----TDRNGAPMVLGMTHEEAAVQLVR 119

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK----EQMFNECL 405
              +SY + P  + +  + +R+E      GL+RVR FT  DA+ F T     EQ +++C 
Sbjct: 120 EYGQSYAKYPFMIYQIQTKFRDEARPRA-GLIRVREFTMKDAYSFHTSQEDLEQYYDKCH 178

Query: 406 KIHNLI 411
           K +  I
Sbjct: 179 KAYERI 184


>gi|222874274|gb|EEF11405.1| predicted protein [Populus trichocarpa]
          Length = 191

 Score = 46.2 bits (108), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 31/138 (22%), Positives = 65/138 (47%), Gaps = 7/138 (5%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I + G+G+  +   G ++ + + + +R ++ +    E+  P V    +W+++G ++    
Sbjct: 32  IKKLGAGIYNYMPMGLRVIRKVEAIVREEMNRAGAVEVTMPVVQPAEMWEETGRFEKMGP 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            +  +K      +  R F ++P +      +    LKSY++LP    +  + +R+E    
Sbjct: 92  ELLRIKD-----RHGRDFVIQPTSEEVVTDIARQELKSYKQLPKNFYQIQTKFRDERRPR 146

Query: 377 LHGLMRVRGFTQDDAHVF 394
             GLMR R F   DA+ F
Sbjct: 147 F-GLMRGREFIMKDAYSF 163


>gi|41615004|ref|NP_963502.1| prolyl-tRNA synthetase [Nanoarchaeum equitans Kin4-M]
 gi|74580044|sp|Q74ND5|SYP_NANEQ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|40068728|gb|AAR39063.1| NEQ210 [Nanoarchaeum equitans Kin4-M]
          Length = 537

 Score = 46.2 bits (108), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 96/453 (21%), Positives = 188/453 (41%), Gaps = 59/453 (13%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+ K  + ++ R+ ++   A    G+  +   G+K F+ L+S +  K++    E    P 
Sbjct: 6   ENPKEWYNEIVRKANIIDDAYPVKGMPVYKPYGYKAFKFLMSLLENKLESIGAEPAWFPI 65

Query: 299 VLDQHLWQ-QSGHWDSYRANMFAV-KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           V+   +++ +S H   +   +F + +  +D ++D     L+P +      +F   ++SYR
Sbjct: 66  VIPYSIFKKESEHIKGFEEEVFWIERAGNDKLED--PLILRPTSETEMYYMFAKWIESYR 123

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISIY 415
           +LP+ +    +VYR E + S   L+R R    ++ H V  ++E       K   +   I+
Sbjct: 124 DLPLIIYMTNTVYRYE-TKSTKALIRGREVLWNETHSVHRSEEDAREHMAKAKEVYDYIF 182

Query: 416 KDFGF-EKIMVKLSTRP--------EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
            D  +   I V+   RP        E+   +DA+  D   +  G +  +           
Sbjct: 183 WDVLYLPYIWVR---RPEWDKFPGGEETYAADAIMPDGRFLQVGTIHLLGQKFAIPFEIK 239

Query: 467 VLLGEGAF--YGPKFEYILKDAIGRDWQC------------GTIQVDFNLPSRFNAFYVN 512
            L     +  YG    YI KD  G +++             G +   + +      + ++
Sbjct: 240 FLDYHPFYKKYGDPNIYI-KDKNGNEYKVHAPKEFWEELEKGKLTKTYTIKIGDKEYTIS 298

Query: 513 S---HSEKCHPVMIHRAVFGSIERFIGIMIENFKGNL-----------PLWLSPIQAIVT 558
           S    +EK       + V+ +     GI +  F G L           P  ++PIQ ++ 
Sbjct: 299 SIEEINEKLKEYDFRKYVWQTS---YGISMRAFGGALYWLGDDLGLVMPYKIAPIQIVII 355

Query: 559 TIT----SSAVEYAQEIANLLK-SHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
            I     +  +EY++++  L+K  + + +++D   +T  YK   + +  +P+ I  G KE
Sbjct: 356 PILGKDDTKVIEYSKKVYELIKDKYRVYLDSD-DTKTPGYKYYYYDLIGVPLRIDIGLKE 414

Query: 614 ASERSIGIRRFGSTTTQKVSL--LDAIPILTKE 644
               SI I R  +     +SL  L+ I  + KE
Sbjct: 415 VENNSITIVRRDNKKKYTISLNELEKIDQIFKE 447


>gi|319407395|emb|CBI81046.1| Alanyl-tRNA synthetase [Bartonella sp. 1-1C]
          Length = 887

 Score = 46.2 bits (108), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 36/143 (25%), Positives = 67/143 (46%), Gaps = 10/143 (6%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSD 117
           +E+I   + R      HS  H++ EA++ I  P V      +      +DF   +P SS+
Sbjct: 548 VELIVDSERRRKIRANHSATHLLHEALRCILGPHVAQKGSLVSPSRLRFDFSHPKPISSE 607

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEK-----ARELFESKKEAYKVEILESIPAKENVT 172
           EL ++E    +I+ ++S  + + ++ +      A  LF  +K   +V ++      E + 
Sbjct: 608 ELKRVEDLANDIVLQNSKVITRLMALDDAILGGAMALF-GEKYGDEVRVVSMGERCEPIE 666

Query: 173 LYRQGEW-FDLCRGPHVRSTGQV 194
           L +   W  +LC G HV+ TG +
Sbjct: 667 LKKH--WSIELCGGTHVQRTGDI 687


>gi|300854401|ref|YP_003779385.1| alanyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
 gi|300434516|gb|ADK14283.1| alanyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
          Length = 879

 Score = 46.2 bits (108), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 72/157 (45%), Gaps = 21/157 (13%)

Query: 56  EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPF 114
           E +IE+   ED RS     H+  H++  A++ +  E     G  +++    +DF+  +  
Sbjct: 547 EDTIELSVDEDRRSNIRKNHTATHLLDSALKQVLGEQVHQSGSYVDESRLRFDFNHFEAV 606

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKE 169
           S ++L  IE  + E I +  P     +S E+A+E     LF++K              K+
Sbjct: 607 SYEKLRNIENLVNESIMKVYPVKTTIMSLEEAKESGAIALFDNK-------------YKD 653

Query: 170 NVTLYRQGEWF-DLCRGPHVRSTGQVKKFFKLMKVAG 205
            V +   G +  +LC G HV ++G++   FK+    G
Sbjct: 654 EVRVVSVGNFSKELCGGTHVSNSGEI-GLFKITSETG 689


>gi|313887310|ref|ZP_07821001.1| alanine--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I]
 gi|312923229|gb|EFR34047.1| alanine--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I]
          Length = 871

 Score = 46.2 bits (108), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 42/185 (22%), Positives = 80/185 (43%), Gaps = 25/185 (13%)

Query: 34  LAKKAVAVAINGKVCDLSDPVREGSIEI-------ITPEDP---------RSLAVIRHSC 77
           +  K V +A +G    + D  RE ++ +         P+ P         R L    H+ 
Sbjct: 507 IGDKGVLIAQDGTEYPIIDTKRENNLPVHILSTLPANPKQPFIARVGDELRHLTEANHTA 566

Query: 78  AHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPF 136
            H+M  A++++        G ++  D   +DF   +  + +E+A++E+ +   I  D P 
Sbjct: 567 THLMHHALRAVLGTHVEQKGSLVSADLLRFDFSHFKKVTPEEIAEVERLVNAEIRADRP- 625

Query: 137 LKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKK 196
                  ++ R +  +K +      L      + V + + G+  +LC G HV STGQ+  
Sbjct: 626 ------RDEQRNVPIAKAKEMGAMALFGEKYGDEVRVIKYGDSVELCGGTHVASTGQI-G 678

Query: 197 FFKLM 201
           FFK++
Sbjct: 679 FFKII 683


>gi|295689605|ref|YP_003593298.1| prolyl-tRNA synthetase [Caulobacter segnis ATCC 21756]
 gi|295431508|gb|ADG10680.1| prolyl-tRNA synthetase [Caulobacter segnis ATCC 21756]
          Length = 443

 Score = 46.2 bits (108), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 39/183 (21%), Positives = 77/183 (42%), Gaps = 11/183 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I ++ +G+  W   G ++   +   +R ++ +    E+  P +    LW++SG +D Y  
Sbjct: 32  IRQEAAGIYAWLPLGLRVLNKIEQIVREEMDRAGAIELLMPTIQLADLWRESGRYDDYGD 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  +     T +  R     P        +F   +KSY++LP  L      +R+E    
Sbjct: 92  EMLRI-----TDRHKRELLFGPTAEEVVTDIFRASIKSYKDLPKNLYNIQWKFRDERRPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
             G+MR R F   DA+ F        +   ++    ++++   G + + ++  T P   +
Sbjct: 147 F-GVMRGREFFMKDAYSFDLDADGARKSYNRMFVAYLNLFARMGLKAVPMRADTGP---I 202

Query: 436 GSD 438
           G D
Sbjct: 203 GGD 205


>gi|194365256|ref|YP_002027866.1| alanyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3]
 gi|194348060|gb|ACF51183.1| alanyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3]
          Length = 882

 Score = 46.2 bits (108), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 34/140 (24%), Positives = 64/140 (45%), Gaps = 11/140 (7%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKM 126
           R   ++ HS  H++  A++ +    VQ     +  D   +DF   QP S++ELA IE+K+
Sbjct: 564 RGATILNHSATHLLHAALREVLGTHVQQKGSMVAPDRLRFDFSHFQPISAEELAVIERKV 623

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRG 185
            + +  ++      +  ++A +        +    L      E+V + + G++  +LC G
Sbjct: 624 NQQVRANNAAEVHNMGMQEALD--------FGAMALFGEKYGEHVRVLKMGDYSTELCGG 675

Query: 186 PHVRSTGQVKKFFKLMKVAG 205
            HV  TG +   FK+    G
Sbjct: 676 THVNRTGDI-GLFKITSEGG 694


>gi|42527166|ref|NP_972264.1| alanyl-tRNA synthetase [Treponema denticola ATCC 35405]
 gi|48428513|sp|P61708|SYA_TREDE RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|41817590|gb|AAS12175.1| alanyl-tRNA synthetase [Treponema denticola ATCC 35405]
          Length = 600

 Score = 46.2 bits (108), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 30/125 (24%), Positives = 61/125 (48%), Gaps = 10/125 (8%)

Query: 75  HSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           H+  H++ +A++ +  + VQ     I  +   +DF   +P +  E  ++E+ + E I  D
Sbjct: 463 HTATHLLHKALRMVLGDHVQQKGSNITAERLRFDFSHPEPMTEAEKKEVERLVNEAIKAD 522

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTG 192
            P   + +  E+A+++        K E        + V +Y+ G++  ++C GPHV  TG
Sbjct: 523 LPVTMEVMPLEEAKKIGAMALFGEKYE--------DVVKVYKIGDFSTEVCGGPHVERTG 574

Query: 193 QVKKF 197
            + +F
Sbjct: 575 SLGRF 579


>gi|15611293|ref|NP_222944.1| prolyl-tRNA synthetase [Helicobacter pylori J99]
 gi|11135064|sp|Q9ZMJ6|SYP_HELPJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|4154734|gb|AAD05795.1| PROLYL-TRNA SYNTHETASE [Helicobacter pylori J99]
          Length = 576

 Score = 46.2 bits (108), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 40/167 (23%), Positives = 71/167 (42%), Gaps = 8/167 (4%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
           +I + GSG+  +     K+   + +   +++++   + I    V+   LW++SG  D Y 
Sbjct: 31  YIYQIGSGIYNFLPLAKKVLDKIENVTHKRMQEHGAQNILMSFVVLASLWEKSGRLDKYG 90

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
             +   K   D       F L P        +  + +KSY++LPV L +  + +R+E   
Sbjct: 91  KELLVFKDRKDN-----DFVLSPTLEENITEIAANFIKSYKQLPVHLYQIHTKFRDEIRP 145

Query: 376 SLHGLMRVRGFTQDDAHVFCT-KEQMFNECLKIHNLIISIYKDFGFE 421
              GL+R R F   D + F    E +  E L   +    I  D G +
Sbjct: 146 RF-GLVRAREFIMKDGYSFHEDAESLDKEFLNTQSAYKEILSDLGLD 191


>gi|319759028|gb|ADV70970.1| prolyl-tRNA synthetase [Streptococcus suis JS14]
          Length = 615

 Score = 46.2 bits (108), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 29/132 (21%), Positives = 63/132 (47%), Gaps = 7/132 (5%)

Query: 274 KIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           ++ +   + MR +  K D  E   P +L   +W++SG +++Y  +++ +K      ++  
Sbjct: 43  RVIEKAKNIMREEFDKIDAIEFLAPALLSADIWRESGRYETYGDDLYKLKN-----REGS 97

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
            F L P +      +    ++SY++LP+ + +    YR+E     +GL+R R F   D +
Sbjct: 98  DFILGPTHEETVTLLARDAVQSYKQLPLNIYQIQPKYRDEKR-PRNGLLRGREFIMKDGY 156

Query: 393 VFCTKEQMFNEC 404
            F    +  ++ 
Sbjct: 157 SFHASYESLDQT 168



 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 30/107 (28%), Positives = 52/107 (48%), Gaps = 7/107 (6%)

Query: 545 NLPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           N P  L+P    +  +     +A+E  Q I   L      + TD RNE +  K  +  + 
Sbjct: 509 NFPKELAPFDVHLIPVNVKDEAAMELTQSIEASLVGAGYEVLTDDRNERVGVKFSDSDLI 568

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKV---SLLDAIPILTKES 645
            +PI +  G K+A++  + ++  G+  T +V    LL+ + ILTKE+
Sbjct: 569 GLPIRVTVG-KKAADGIVEVKIKGTGDTVEVHVDQLLETLQILTKEN 614


>gi|190573725|ref|YP_001971570.1| alanyl-tRNA synthetase [Stenotrophomonas maltophilia K279a]
 gi|205830222|sp|B2FL33|SYA_STRMK RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|190011647|emb|CAQ45266.1| putative alanyl-tRNA synthetase [Stenotrophomonas maltophilia
           K279a]
          Length = 882

 Score = 46.2 bits (108), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 34/140 (24%), Positives = 64/140 (45%), Gaps = 11/140 (7%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKM 126
           R   ++ HS  H++  A++ +    VQ     +  D   +DF   QP S++ELA IE+K+
Sbjct: 564 RGATILNHSATHLLHAALREVLGSHVQQKGSLVAPDRLRFDFSHFQPISAEELAVIERKV 623

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRG 185
            + +  ++      +  ++A +        +    L      E+V + + G++  +LC G
Sbjct: 624 NQQVRANNAAEVHNMGMQEALD--------FGAMALFGEKYGEHVRVLKMGDYSTELCGG 675

Query: 186 PHVRSTGQVKKFFKLMKVAG 205
            HV  TG +   FK+    G
Sbjct: 676 THVNRTGDI-GLFKITSEGG 694


>gi|187924092|ref|YP_001895734.1| Proline--tRNA ligase [Burkholderia phytofirmans PsJN]
 gi|187715286|gb|ACD16510.1| Proline--tRNA ligase [Burkholderia phytofirmans PsJN]
          Length = 380

 Score = 46.2 bits (108), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 42/191 (21%), Positives = 84/191 (43%), Gaps = 11/191 (5%)

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEI 294
           +F +++ + +   LAR+  L H  +D +G+  W   G +  + + S +R ++ +  + EI
Sbjct: 12  FFEQDNTRLELTDLARKACLVH--QDAAGLYSWMSLGLRAQRRVESVVREEMERAGFCEI 69

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
               + D  LW+Q+G  D+Y   +  +     T +  R F L    C            +
Sbjct: 70  QMSLLQDADLWRQTGRLDAYGDELMRL-----TSRSGRLFCLGA-TCEELATQMVRTHYN 123

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIIS 413
             ++ + L +FG+ YR+E   +  GL R + F   D + F   E       + +    + 
Sbjct: 124 RTDMSLGLYQFGNKYRDELR-TRGGLARAKEFIMKDGYSFNATEDGARAAYEAVREAYLR 182

Query: 414 IYKDFGFEKIM 424
           I++  G + I+
Sbjct: 183 IFRRLGLDAIV 193


>gi|332299295|ref|YP_004441216.1| alanyl-tRNA synthetase [Porphyromonas asaccharolytica DSM 20707]
 gi|332176358|gb|AEE12048.1| alanyl-tRNA synthetase [Porphyromonas asaccharolytica DSM 20707]
          Length = 872

 Score = 46.2 bits (108), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 42/185 (22%), Positives = 80/185 (43%), Gaps = 25/185 (13%)

Query: 34  LAKKAVAVAINGKVCDLSDPVREGSIEI-------ITPEDP---------RSLAVIRHSC 77
           +  K V +A +G    + D  RE ++ +         P+ P         R L    H+ 
Sbjct: 508 IGDKGVLIAQDGTEYPIIDTKRENNLPVHILSTLPANPKQPFIARVGDELRHLTEANHTA 567

Query: 78  AHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPF 136
            H+M  A++++        G ++  D   +DF   +  + +E+A++E+ +   I  D P 
Sbjct: 568 THLMHHALRAVLGTHVEQKGSLVSADLLRFDFSHFKKVTPEEIAEVERLVNAEIRADRP- 626

Query: 137 LKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKK 196
                  ++ R +  +K +      L      + V + + G+  +LC G HV STGQ+  
Sbjct: 627 ------RDEQRNVPIAKAKEMGAMALFGEKYGDEVRVIKYGDSVELCGGTHVASTGQI-G 679

Query: 197 FFKLM 201
           FFK++
Sbjct: 680 FFKII 684


>gi|301629493|ref|XP_002943874.1| PREDICTED: prolyl-tRNA synthetase-like [Xenopus (Silurana)
           tropicalis]
          Length = 657

 Score = 46.2 bits (108), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 32/134 (23%), Positives = 62/134 (46%), Gaps = 7/134 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           G+G+  +   G ++ + + + +R ++ +    E   P V    LWQ++G ++     +  
Sbjct: 36  GAGIYSYMPMGLRVIRKVEAIVREEMDRAGAAECAMPVVQPAELWQETGRFEKMGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +K   D     R F ++P +      +    L+SY++LP    +  + +R+E      GL
Sbjct: 96  IKDRHD-----RDFVVQPTSEEVVTDIARQELRSYKQLPRNFYQIQTKFRDERRPRF-GL 149

Query: 381 MRVRGFTQDDAHVF 394
           MR R F   DA+ F
Sbjct: 150 MRGREFIMKDAYSF 163


>gi|94267977|ref|ZP_01291052.1| Prolyl-tRNA synthetase [delta proteobacterium MLMS-1]
 gi|93451782|gb|EAT02540.1| Prolyl-tRNA synthetase [delta proteobacterium MLMS-1]
          Length = 572

 Score = 46.2 bits (108), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 76/175 (43%), Gaps = 15/175 (8%)

Query: 486 AIGRDWQCGTIQVDFNLPSR-FNAFYVNSHSEKCHPVMIHRAVFG-SIERFIGIMIENFK 543
           A+ R  + G I    N  SR  NA +++   +  H +M     FG  + R +   IE   
Sbjct: 399 AMTRGIEVGHIFKLGNEYSRALNATFLDKEGQSRHFIM---GCFGIGVSRTVAAAIEQNH 455

Query: 544 GN----LPLWLSPIQAIVTTITSSAVEYAQEIANL---LKSHHLSIETDFRNETINYKIR 596
                  PL ++P Q I+  +T    E + E   L   L +  L +  D RNE    K +
Sbjct: 456 DRDGIIFPLPIAPFQVILLNLTPKDPEISAEAQRLYRELTAAGLEVLLDDRNERPGAKFK 515

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK---ESLPP 648
           +  +  IPI ++ G + A E  + IR      + + +   A+ ++T+   + LPP
Sbjct: 516 DADLIGIPIRLMVGKRFAQEGLLEIRNRADGRSSEATPAAAVAVITEMVAQQLPP 570



 Score = 44.3 bits (103), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 35/145 (24%), Positives = 63/145 (43%), Gaps = 7/145 (4%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SGV  +   G    + +   +R+++ +   +E+  P V    LW++SG W+ Y   +   
Sbjct: 37  SGVYSYLPLGLAAIRKVEEIVRQEMNRAGAQELLLPMVQPADLWRESGRWEKYGPELLRF 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           +      +  R   L P +      +    + SYR+LP+ L +  + +R+E      GLM
Sbjct: 97  Q-----DRHQRESCLGPTHEEVITDLVRLNVHSYRDLPLNLYQIQTKFRDEIRPRF-GLM 150

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLK 406
           R R F   D + F   E   +E  +
Sbjct: 151 RGREFIMKDGYSFDADEAAADETYR 175


>gi|229530020|ref|ZP_04419410.1| prolyl-tRNA synthetase [Vibrio cholerae 12129(1)]
 gi|229333794|gb|EEN99280.1| prolyl-tRNA synthetase [Vibrio cholerae 12129(1)]
          Length = 571

 Score = 46.2 bits (108), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 64/135 (47%), Gaps = 9/135 (6%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINT--PQVLDQHLWQQSGHWDSYRANMF 319
            SG+  W   G ++ + + + +R++I D+   I T  P V    LW+++G     R+   
Sbjct: 36  ASGLYTWLPTGLRVLRKVENIVRQEI-DNAGAIETLMPVVQPFQLWEETG-----RSEKM 89

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHG 379
             +    T +  R F L P       A+  + + SY++LP+ L +  + +R+E      G
Sbjct: 90  GPELLRFTDRHERPFVLSPTAEEVITALVRNEVSSYKQLPLNLYQIQTKFRDERRPRF-G 148

Query: 380 LMRVRGFTQDDAHVF 394
           +MR R F   DA+ F
Sbjct: 149 VMRAREFCMMDAYSF 163


>gi|94265181|ref|ZP_01288943.1| Prolyl-tRNA synthetase [delta proteobacterium MLMS-1]
 gi|93454322|gb|EAT04629.1| Prolyl-tRNA synthetase [delta proteobacterium MLMS-1]
          Length = 572

 Score = 46.2 bits (108), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 76/175 (43%), Gaps = 15/175 (8%)

Query: 486 AIGRDWQCGTIQVDFNLPSR-FNAFYVNSHSEKCHPVMIHRAVFG-SIERFIGIMIENFK 543
           A+ R  + G I    N  SR  NA +++   +  H +M     FG  + R +   IE   
Sbjct: 399 AMTRGIEVGHIFKLGNEYSRALNATFLDKEGQSRHFIM---GCFGIGVSRTVAAAIEQNH 455

Query: 544 GN----LPLWLSPIQAIVTTITSSAVEYAQEIANL---LKSHHLSIETDFRNETINYKIR 596
                  PL ++P Q I+  +T    E + E   L   L +  L +  D RNE    K +
Sbjct: 456 DRDGIIFPLPIAPFQVILLNLTPKDPEISAEAQRLYQELTAAGLEVLLDDRNERPGAKFK 515

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK---ESLPP 648
           +  +  IPI ++ G + A E  + IR      + + +   A+ ++T+   + LPP
Sbjct: 516 DADLIGIPIRLMVGKRFAQEGLLEIRNRADGRSSEATPAAAVAVITEMVAQQLPP 570



 Score = 44.3 bits (103), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 35/145 (24%), Positives = 63/145 (43%), Gaps = 7/145 (4%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SGV  +   G    + +   +R+++ +   +E+  P V    LW++SG W+ Y   +   
Sbjct: 37  SGVYSYLPLGLAAIRKVEEIVRQEMNRAGAQELLLPMVQPADLWRESGRWEKYGPELLRF 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           +      +  R   L P +      +    + SYR+LP+ L +  + +R+E      GLM
Sbjct: 97  Q-----DRHQRESCLGPTHEEVITDLVRLNVHSYRDLPLNLYQIQTKFRDEIRPRF-GLM 150

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLK 406
           R R F   D + F   E   +E  +
Sbjct: 151 RGREFIMKDGYSFDADEAAADETYR 175


>gi|325474209|gb|EGC77397.1| alanyl-tRNA synthetase [Treponema denticola F0402]
          Length = 600

 Score = 46.2 bits (108), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 30/125 (24%), Positives = 61/125 (48%), Gaps = 10/125 (8%)

Query: 75  HSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           H+  H++ +A++ +  + VQ     I  +   +DF   +P +  E  ++E+ + E I  D
Sbjct: 463 HTATHLLHKALRMVLGDHVQQKGSNITAERLRFDFSHPEPMTEAEKKEVERLVNEAIKAD 522

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTG 192
            P   + +  E+A+++        K E        + V +Y+ G++  ++C GPHV  TG
Sbjct: 523 LPVTMEVMPLEEAKKIGAMALFGEKYE--------DVVKVYKIGDFSTEVCGGPHVERTG 574

Query: 193 QVKKF 197
            + +F
Sbjct: 575 SLGRF 579


>gi|325109306|ref|YP_004270374.1| prolyl-tRNA synthetase [Planctomyces brasiliensis DSM 5305]
 gi|324969574|gb|ADY60352.1| Prolyl-tRNA synthetase [Planctomyces brasiliensis DSM 5305]
          Length = 578

 Score = 46.2 bits (108), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 40/181 (22%), Positives = 84/181 (46%), Gaps = 12/181 (6%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANM--F 319
           +G   +   GW+  Q   + +R ++ +    E++ P +    L++++G  +++ + +  F
Sbjct: 37  AGAYTYLPLGWRSVQKAAAIIREEMERAGACELHMPALQPIELFERTGRINAFGSVLMKF 96

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHG 379
            V   D  +      AL P +      + +  + SYR+LP+ + +  + +RNE      G
Sbjct: 97  DVPRGDRKVP----VALGPTHEEVVTDLISRHISSYRQLPLTVYQIQTKFRNEERPRF-G 151

Query: 380 LMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD 438
           ++R   F   DA+ F +  EQ+      +++    ++K  G E I V+  + P   +G D
Sbjct: 152 VLRTSEFLMKDAYSFASSLEQLNTTYDAMYDAYCRVFKRCGLEFIPVEAESGP---IGGD 208

Query: 439 A 439
           A
Sbjct: 209 A 209


>gi|320096236|ref|ZP_08027820.1| proline--tRNA ligase [Actinomyces sp. oral taxon 178 str. F0338]
 gi|319976817|gb|EFW08576.1| proline--tRNA ligase [Actinomyces sp. oral taxon 178 str. F0338]
          Length = 594

 Score = 46.2 bits (108), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 41/188 (21%), Positives = 79/188 (42%), Gaps = 11/188 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E   H+ L R     +I     G+  W   G +  + +   +R ++ +   +E++ P 
Sbjct: 19  DAEVNSHKLLVRAG---YIRRAAPGIYTWLPLGLRTLRKIEGIVREEMDRMGAQEVHFPG 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++    ++ +  W+ Y   +F  K AD    D   + L P +      +      SY++L
Sbjct: 76  LIPAEPYKATNRWEDYGPTLF--KLADRKGGD---YLLAPTHEEMFTLLVKDMYSSYKDL 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH-NLIISIYKD 417
           P  L +  + YR+E +    GL+R R F   DA+ F   E       +   +    I+  
Sbjct: 131 PTTLYQIQTKYRDE-ARPRAGLIRGREFVMKDAYSFDIDEAGLEASYQAERDTYERIFTR 189

Query: 418 FGFEKIMV 425
            G E ++V
Sbjct: 190 LGLEYVIV 197


>gi|295111268|emb|CBL28018.1| alanyl-tRNA synthetase [Synergistetes bacterium SGP1]
          Length = 879

 Score = 46.2 bits (108), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 64/146 (43%), Gaps = 9/146 (6%)

Query: 54  VREGSIEIITPEDPRSLAVIR-HSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY-YDFDKE 111
           VR G       +D R  A+ R H+  H++ EA+  +        G ++ D F  +DF   
Sbjct: 543 VRVGDSMTAEADDARRQAIRRNHTGTHLLHEALGRVLGRHVRQAGSLVTDRFLRFDFTHH 602

Query: 112 QPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENV 171
            P +  ++ ++E+ +   I R+ P      + E+AREL        K   +  +    + 
Sbjct: 603 TPLTDGQIEEVERIVNGEILRNVPVSTAEHTLEEARELGAKALFDEKYGDVVRVVTVPDF 662

Query: 172 TLYRQGEWFDLCRGPHVRSTGQVKKF 197
           ++       +LC G HVR+TG +  F
Sbjct: 663 SM-------ELCGGLHVRATGDIGSF 681


>gi|228989226|ref|ZP_04149220.1| Seryl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
 gi|228995409|ref|ZP_04155080.1| Seryl-tRNA synthetase [Bacillus mycoides Rock3-17]
 gi|229003023|ref|ZP_04160881.1| Seryl-tRNA synthetase [Bacillus mycoides Rock1-4]
 gi|228758223|gb|EEM07410.1| Seryl-tRNA synthetase [Bacillus mycoides Rock1-4]
 gi|228764335|gb|EEM13211.1| Seryl-tRNA synthetase [Bacillus mycoides Rock3-17]
 gi|228770501|gb|EEM19071.1| Seryl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
          Length = 424

 Score = 46.2 bits (108), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 36/153 (23%), Positives = 66/153 (43%), Gaps = 13/153 (8%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDD--YEEINTPQVLDQHLWQQSGHWDSYRANMF 319
           GS  +F+   G ++ + LIS+M     D+  YEE+  P ++++     +G    +  + F
Sbjct: 160 GSRFVFYKGAGARLERALISFMLDLHTDEHGYEEVLPPYMVNRASMTGTGQLPKFEEDAF 219

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS--- 376
            ++  D        + L P        +    + S  +LP+R A F S +R+E   +   
Sbjct: 220 RIESED--------YFLIPTAEVPVTNMHRDEILSSEQLPIRYAAFSSCFRSEAGSAGRD 271

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
             GL+R   F + +   F   E  + E  K+ N
Sbjct: 272 TRGLIRQHQFNKVELVKFVKPEDSYEELEKLTN 304


>gi|146319615|ref|YP_001199327.1| prolyl-tRNA synthetase [Streptococcus suis 05ZYH33]
 gi|146321813|ref|YP_001201524.1| prolyl-tRNA synthetase [Streptococcus suis 98HAH33]
 gi|253752613|ref|YP_003025754.1| prolyl-tRNA synthetase [Streptococcus suis SC84]
 gi|253754439|ref|YP_003027580.1| prolyl-tRNA synthetase [Streptococcus suis P1/7]
 gi|253756372|ref|YP_003029512.1| prolyl-tRNA synthetase [Streptococcus suis BM407]
 gi|166980162|sp|A4W435|SYP_STRS2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|166980163|sp|A4VXT8|SYP_STRSY RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|145690421|gb|ABP90927.1| Prolyl-tRNA synthetase [Streptococcus suis 05ZYH33]
 gi|145692619|gb|ABP93124.1| Prolyl-tRNA synthetase [Streptococcus suis 98HAH33]
 gi|251816902|emb|CAZ52551.1| prolyl-tRNA synthetase [Streptococcus suis SC84]
 gi|251818836|emb|CAZ56679.1| prolyl-tRNA synthetase [Streptococcus suis BM407]
 gi|251820685|emb|CAR47447.1| prolyl-tRNA synthetase [Streptococcus suis P1/7]
 gi|292559230|gb|ADE32231.1| Prolyl-tRNA synthetase [Streptococcus suis GZ1]
          Length = 620

 Score = 46.2 bits (108), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 29/132 (21%), Positives = 63/132 (47%), Gaps = 7/132 (5%)

Query: 274 KIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           ++ +   + MR +  K D  E   P +L   +W++SG +++Y  +++ +K      ++  
Sbjct: 48  RVIEKAKNIMREEFDKIDAIEFLAPALLSADIWRESGRYETYGDDLYKLKN-----REGS 102

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
            F L P +      +    ++SY++LP+ + +    YR+E     +GL+R R F   D +
Sbjct: 103 DFILGPTHEETVTLLARDAVQSYKQLPLNIYQIQPKYRDEKR-PRNGLLRGREFIMKDGY 161

Query: 393 VFCTKEQMFNEC 404
            F    +  ++ 
Sbjct: 162 SFHASYESLDQT 173



 Score = 39.7 bits (91), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 30/107 (28%), Positives = 52/107 (48%), Gaps = 7/107 (6%)

Query: 545 NLPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           N P  L+P    +  +     +A+E  Q I   L      + TD RNE +  K  +  + 
Sbjct: 514 NFPKELAPFDVHLIPVNVKDEAAMELTQSIEASLVGAGYEVLTDDRNERVGVKFSDSDLI 573

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKV---SLLDAIPILTKES 645
            +PI +  G K+A++  + ++  G+  T +V    LL+ + ILTKE+
Sbjct: 574 GLPIRVTVG-KKAADGIVEVKIKGTGDTVEVHVDQLLETLQILTKEN 619


>gi|126729804|ref|ZP_01745617.1| alanyl-tRNA synthetase [Sagittula stellata E-37]
 gi|126709923|gb|EBA08976.1| alanyl-tRNA synthetase [Sagittula stellata E-37]
          Length = 890

 Score = 46.2 bits (108), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 36/143 (25%), Positives = 63/143 (44%), Gaps = 6/143 (4%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPI-IEDGFYYDFDKEQPFSSDELAQIEKKM 126
           RS     HS  H++ EA++    +     G +   D   +DF   +  S+ E+  +E+ +
Sbjct: 560 RSSIRANHSATHLLHEALREALGDHVAQRGSLNAPDRLRFDFSHGKALSASEIKNVERDV 619

Query: 127 QEIIARDSPFLKQYLSHEKARELFESK--KEAYKVEI-LESIPAKENVTLYRQGEWF--D 181
              I +++P   + ++ + AR +       E Y  E+ + S+ AK        G  +  +
Sbjct: 620 NAYIRQNTPVSTRLMTPDDARAIGAQALFGEKYGDEVRVVSMGAKPGSGKGADGATYSLE 679

Query: 182 LCRGPHVRSTGQVKKFFKLMKVA 204
           LC G HVR TG +  F  L   A
Sbjct: 680 LCGGTHVRQTGDIGAFVCLGDSA 702


>gi|307132211|ref|YP_003884227.1| alanyl-tRNA synthetase [Dickeya dadantii 3937]
 gi|306529740|gb|ADM99670.1| alanyl-tRNA synthetase [Dickeya dadantii 3937]
          Length = 875

 Score = 45.8 bits (107), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 40/173 (23%), Positives = 73/173 (42%), Gaps = 33/173 (19%)

Query: 40  AVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPI 99
           ++ +N KV  + D VR   I +             HS  H++  A++ +  E     G +
Sbjct: 541 SLRVNDKVDAVVDHVRRDRIRL------------NHSATHLLHAALRQVLGEHVAQKGSL 588

Query: 100 IEDGFY-YDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESK 153
           + D +  +DF   +    +++ Q+E  +   I R+ P     ++ + AR      LF  K
Sbjct: 589 VNDSYLRFDFSHPEAMKPEQIRQVEDIVNTQIRRNLPVETDVMALDAARAKGAMALFGEK 648

Query: 154 KEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKFFKLMKVAG 205
            E             ENV +   G++  +LC G H R TG +   F+++  +G
Sbjct: 649 YE-------------ENVRVLSMGDFSIELCGGTHARRTGDI-GLFRIVSESG 687


>gi|298736816|ref|YP_003729346.1| prolyl-tRNA synthetase [Helicobacter pylori B8]
 gi|298356010|emb|CBI66882.1| prolyl-tRNA synthetase [Helicobacter pylori B8]
          Length = 577

 Score = 45.8 bits (107), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 41/180 (22%), Positives = 77/180 (42%), Gaps = 11/180 (6%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           + H+ LA+   ++ +   GSG+  +     K+   + +   +++++   + I    V+  
Sbjct: 21  KSHKHLAQAGYIYQV---GSGIYNFLPLAKKVLDKIENITHKRMQEHGAQNILMSFVVLA 77

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SG  D Y   +   K   +       F L P        +  + +KSY++LPV L
Sbjct: 78  SLWEKSGRLDKYGKELLVFKDRKNN-----DFVLSPTLEENITEIAANFIKSYKQLPVHL 132

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT-KEQMFNECLKIHNLIISIYKDFGFE 421
            +  + +R+E      GL+R R F   D + F    E +  E L   +    I  D G +
Sbjct: 133 YQIHTKFRDEIRPRF-GLVRAREFIMKDGYSFHEDAESLDKEFLNTQSAYKEILSDLGLD 191


>gi|289423700|ref|ZP_06425499.1| proline--tRNA ligase [Peptostreptococcus anaerobius 653-L]
 gi|289155950|gb|EFD04616.1| proline--tRNA ligase [Peptostreptococcus anaerobius 653-L]
          Length = 481

 Score = 45.8 bits (107), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 71/312 (22%), Positives = 126/312 (40%), Gaps = 55/312 (17%)

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
            A++P +      ++   L SYR+LP    ++ SV R E S      +R   F   + H 
Sbjct: 111 LAVRPTSETIICTMYAKWLNSYRQLPFLYNQWNSVVRWEKS--TRPFLRTSEFLWQEGHT 168

Query: 394 FC-TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMK-GV 451
              T+++  +E L+     ++ YK                           AE++M   V
Sbjct: 169 LHETEQEAIDETLQQ----LAAYKSV-------------------------AEDLMAIPV 199

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFY 510
           +D  K+ S+         G  A Y    E ++ D  G+  Q GT   +  +    F+  +
Sbjct: 200 IDGRKSESEK------FAGASATY--TIEAMMHD--GKALQSGTSHFLGQHFTKAFDITF 249

Query: 511 VNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTITSS--- 563
            +   +  +P   +   +G   R IG +I     N    LP  ++P Q I+  I ++   
Sbjct: 250 SDREGKLANP---YHTSWGISTRLIGGLIMVHSDNRGLVLPPKMAPTQVIIIPIAANKGG 306

Query: 564 AVEYAQEIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
            +E   ++A  LK+  +S+E D R N +  YK  +  +K IP+ +  G K+  +      
Sbjct: 307 VMEVVDKVAADLKAKGISVEVDDRDNYSPGYKFNDAEMKGIPVRLEIGPKDIEKNQALAF 366

Query: 623 RFGSTTTQKVSL 634
           R    T  ++SL
Sbjct: 367 RRDELTKSEMSL 378


>gi|119963667|ref|YP_947320.1| prolyl-tRNA synthetase [Arthrobacter aurescens TC1]
 gi|152074745|sp|A1R508|SYP_ARTAT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|119950526|gb|ABM09437.1| prolyl-tRNA synthetase [Arthrobacter aurescens TC1]
          Length = 603

 Score = 45.8 bits (107), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 41/191 (21%), Positives = 81/191 (42%), Gaps = 17/191 (8%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R     +I     G+  W   G  + + +   +R+++     +E++ P 
Sbjct: 19  DAEVDSHKLLVRAG---YIRRAAPGIYTWLPLGLSVLRKVEDIIRQEMSAIGAQEVHFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAV---KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           +L +  ++ +  W  Y   +F +   K AD        + L P +      +      SY
Sbjct: 76  LLPREPYEATNRWTEYGEGLFRLQDRKGAD--------YLLAPTHEEMFTLLVKDLYSSY 127

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI-ISI 414
           ++LP+ L +  + YR+E +    GL+R R F   D++ F   +   +     H    + I
Sbjct: 128 KDLPLSLYQIQNKYRDE-ARPRAGLLRGREFIMKDSYSFDIDDAGLDASYAAHRAAYLKI 186

Query: 415 YKDFGFEKIMV 425
           ++  G E I V
Sbjct: 187 FERLGLEVIPV 197


>gi|169630222|ref|YP_001703871.1| prolyl-tRNA synthetase [Mycobacterium abscessus ATCC 19977]
 gi|226701313|sp|B1MD96|SYP_MYCA9 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|169242189|emb|CAM63217.1| Prolyl-tRNA synthetase ProS [Mycobacterium abscessus]
          Length = 580

 Score = 45.8 bits (107), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 44/196 (22%), Positives = 87/196 (44%), Gaps = 19/196 (9%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +  +A    GV  W   G ++ + + + +R ++     +EI  P 
Sbjct: 19  DAEVPSHKLLIRAGYVRPVA---PGVYSWLPLGLRVLRKIENIVREEMNAIGGQEILLPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L +  ++ +  W  Y  ++F +K   D   D+       M  P H  +F   +K    S
Sbjct: 76  LLPRAPYETTNRWTEYGDSLFRLKDRRD--NDM-------MLGPTHEELFALTVKGEYSS 126

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH-NLIIS 413
           Y++ PV L +  + YR+E +    G++R R F   D++ F T +         H +    
Sbjct: 127 YKDFPVILYQVQTKYRDE-ARPRAGILRGREFVMKDSYSFDTSDDGLKAAYHAHRDAYQR 185

Query: 414 IYKDFGFEKIMVKLST 429
           I+   G + ++V  ++
Sbjct: 186 IFGRLGLDYVIVAATS 201


>gi|150005824|ref|YP_001300568.1| prolyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482]
 gi|254881996|ref|ZP_05254706.1| prolyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
 gi|294776476|ref|ZP_06741951.1| proline--tRNA ligase [Bacteroides vulgatus PC510]
 gi|319640997|ref|ZP_07995704.1| prolyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
 gi|166980101|sp|A6L5I2|SYP_BACV8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|149934248|gb|ABR40946.1| prolyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482]
 gi|254834789|gb|EET15098.1| prolyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
 gi|294449673|gb|EFG18198.1| proline--tRNA ligase [Bacteroides vulgatus PC510]
 gi|317387375|gb|EFV68247.1| prolyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
          Length = 496

 Score = 45.8 bits (107), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 63/290 (21%), Positives = 121/290 (41%), Gaps = 54/290 (18%)

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           + + + + SYR+LP+   ++ +V R E    L   +R   F   + H   T      E  
Sbjct: 133 STYKNWINSYRDLPILCNQWANVMRWEMRTRL--FLRTAEFLWQEGH---TAHATREEAE 187

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
                ++ +Y DF  EK M                   A  ++KGV      S+ +R   
Sbjct: 188 AEAQKMLHVYGDFA-EKYM-------------------AVPVIKGV-----KSANERF-- 220

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIH 524
                 GA      E +++D  G+  QCGT   +  N    FN  +V+ +++  +   + 
Sbjct: 221 -----AGALDTYTIEGLMQD--GKALQCGTSHFLGQNFAKAFNVQFVDKNNKLDY---VW 270

Query: 525 RAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTITSS-----AVEYAQE-IANL 574
              +G   R +G +I     +    LP  L+PIQ ++  I  +      ++   E I N 
Sbjct: 271 ATSWGVSTRLMGALIMTHSDDNGLVLPPHLAPIQVVIVPIYKNDEMLKKIDAKVEGIVNK 330

Query: 575 LKSHHLSIETD-FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRR 623
           LK+  +S++ D   N+   +K  ++ +K +P+ ++ G ++    ++ + R
Sbjct: 331 LKAMGISVKYDNADNKRPGFKFADYELKGVPVRLVMGGRDLENNTMEVMR 380


>gi|84683507|ref|ZP_01011410.1| prolyl-tRNA synthetase [Maritimibacter alkaliphilus HTCC2654]
 gi|84668250|gb|EAQ14717.1| prolyl-tRNA synthetase [Rhodobacterales bacterium HTCC2654]
          Length = 444

 Score = 45.8 bits (107), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 45/201 (22%), Positives = 83/201 (41%), Gaps = 14/201 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           E++   HR + R      I +  +G+  W   G+K+ + +   +   + +  +  I  P 
Sbjct: 17  EAQIASHRLMLRAG---MIKQQAAGIYSWLPLGYKVLKNIERIVHEEQQRAGHIPILMPT 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW++SG +D Y   M  +     T +  R     P N      +F   + SY++L
Sbjct: 74  LQSADLWRESGRYDDYGQEMLRI-----TDRHGRDMLYGPTNEEMVTDIFRAHVGSYKDL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKD 417
           P+ L      +R+E      G+MR R F   D + F  T+E   +   +     +  Y+ 
Sbjct: 129 PLTLYHIQWKFRDEIRPRF-GVMRGREFFMKDGYNFDLTREDALHAYNRHLVSYLRTYER 187

Query: 418 FGFEKIMVKLSTRPEKRVGSD 438
            G + I ++    P   +G D
Sbjct: 188 MGLQAIPMRADGGP---IGGD 205


>gi|319956647|ref|YP_004167910.1| prolyl-tRNA synthetase [Nitratifractor salsuginis DSM 16511]
 gi|319419051|gb|ADV46161.1| prolyl-tRNA synthetase [Nitratifractor salsuginis DSM 16511]
          Length = 571

 Score = 45.8 bits (107), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 6/108 (5%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           +E++   V    LW++SG ++ Y   +        T +    F L P +    V +    
Sbjct: 67  QEVDLAFVTPAELWRESGRFEKYGKELLRF-----TDRKENEFVLGPTHEEMMVNLVRQS 121

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQ 399
           +KSY++LP+ L +  + +R+E      GLMR R F  +D + F   E+
Sbjct: 122 VKSYKQLPLHLYQIKTKFRDEIRPRF-GLMRGREFLMEDGYSFHKDEE 168


>gi|222529322|ref|YP_002573204.1| alanyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
 gi|222456169|gb|ACM60431.1| alanyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
          Length = 883

 Score = 45.8 bits (107), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 80/179 (44%), Gaps = 26/179 (14%)

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           E+ R  A+  H+  H++  A++ I  +  Q +   +  D   +DF   +P S ++L +IE
Sbjct: 554 EELRLAAMKNHTATHLLHSALRKILGQHAQQSGSQVTPDRLRFDFAHYEPLSEEQLIEIE 613

Query: 124 KKMQEIIARDSPFLKQYLSHEK-----ARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           + +  II +  P  K     +      A  LF+ K                 V + + G+
Sbjct: 614 EMVNNIIQQAIPVEKIVTDLDSALRMGATALFDEKYSNV-------------VRVIKIGD 660

Query: 179 W-FDLCRGPHVRSTGQVKKFFKLM---KVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQ 233
           +  +LC G HV +TGQ+   FK++    VA    R ++     +++Y    NTQQ L Q
Sbjct: 661 FSMELCGGTHVDNTGQI-GMFKIISESSVAAGVRRIEAITG--NKVYEFILNTQQTLKQ 716


>gi|212693169|ref|ZP_03301297.1| hypothetical protein BACDOR_02676 [Bacteroides dorei DSM 17855]
 gi|237709909|ref|ZP_04540390.1| prolyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA]
 gi|237725421|ref|ZP_04555902.1| prolyl-tRNA synthetase [Bacteroides sp. D4]
 gi|265753562|ref|ZP_06088917.1| prolyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
 gi|212664274|gb|EEB24846.1| hypothetical protein BACDOR_02676 [Bacteroides dorei DSM 17855]
 gi|229436108|gb|EEO46185.1| prolyl-tRNA synthetase [Bacteroides dorei 5_1_36/D4]
 gi|229456002|gb|EEO61723.1| prolyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA]
 gi|263235276|gb|EEZ20800.1| prolyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
          Length = 496

 Score = 45.8 bits (107), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 63/290 (21%), Positives = 121/290 (41%), Gaps = 54/290 (18%)

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           + + + + SYR+LP+   ++ +V R E    L   +R   F   + H   T      E  
Sbjct: 133 STYKNWINSYRDLPILCNQWANVMRWEMRTRL--FLRTAEFLWQEGH---TAHATREEAE 187

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
                ++ +Y DF  EK M                   A  ++KGV      S+ +R   
Sbjct: 188 AEAQKMLHVYGDFA-EKYM-------------------AVPVIKGV-----KSANERF-- 220

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIH 524
                 GA      E +++D  G+  QCGT   +  N    FN  +V+ +++  +   + 
Sbjct: 221 -----AGALDTYTIEGLMQD--GKALQCGTSHFLGQNFAKAFNVQFVDKNNKLDY---VW 270

Query: 525 RAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTITSS-----AVEYAQE-IANL 574
              +G   R +G +I     +    LP  L+PIQ ++  I  +      ++   E I N 
Sbjct: 271 ATSWGVSTRLMGALIMTHSDDNGLVLPPHLAPIQVVIVPIYKNDEMLKKIDAKVEGIVNK 330

Query: 575 LKSHHLSIETD-FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRR 623
           LK+  +S++ D   N+   +K  ++ +K +P+ ++ G ++    ++ + R
Sbjct: 331 LKAMGISVKYDNADNKRPGFKFADYELKGVPVRLVMGGRDLENNTMEVMR 380


>gi|123968100|ref|YP_001008958.1| prolyl-tRNA synthetase [Prochlorococcus marinus str. AS9601]
 gi|152112943|sp|A2BPZ0|SYP_PROMS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|123198210|gb|ABM69851.1| Prolyl-tRNA synthetase [Prochlorococcus marinus str. AS9601]
          Length = 600

 Score = 45.8 bits (107), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 34/134 (25%), Positives = 63/134 (47%), Gaps = 10/134 (7%)

Query: 297 PQVLDQHLWQQSGHWDSYRAN---MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           PQ+    LW++S  W+ Y A    MF +K      +  + F L P +     ++ +  + 
Sbjct: 73  PQLHPADLWKKSERWEGYTAGEGIMFNLKD-----RQGKEFGLAPTHEEVITSIASETIN 127

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLII 412
           SY++LP    +  + +R+E      GLMR R F   D + F  ++  + +   K+ N   
Sbjct: 128 SYKQLPQCFYQIQTKFRDEIRPRF-GLMRSREFIMKDGYSFHSSQNDLASFYEKVSNAYE 186

Query: 413 SIYKDFGFEKIMVK 426
           +I+K  G + + V+
Sbjct: 187 NIFKSCGLQTVGVE 200


>gi|167645359|ref|YP_001683022.1| alanyl-tRNA synthetase [Caulobacter sp. K31]
 gi|205830018|sp|B0SZN4|SYA_CAUSK RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|167347789|gb|ABZ70524.1| alanyl-tRNA synthetase [Caulobacter sp. K31]
          Length = 883

 Score = 45.8 bits (107), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 37/157 (23%), Positives = 73/157 (46%), Gaps = 11/157 (7%)

Query: 48  CDLSDPVREGSIEIITPEDPRSLAV-IRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFY 105
            +L+ P++ G   + + +  R       HS AH++  A+  +        G +++ D   
Sbjct: 535 VELAGPLKVGDSVVASVDAARRTTTRANHSAAHLVHAALHHVLGPHVAQKGQMVDGDRMR 594

Query: 106 YDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVE 160
           +DF    P ++DE+ +IE ++  +I ++ P   + ++ ++A E     LF  +K    V 
Sbjct: 595 FDFSHGGPLTADEIERIEAEVNAVIRQNVPAQTKEMAPQEAIEAGAVALF-GEKYGDSVR 653

Query: 161 ILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
           +L      E++T   +    +LC G HV  TG +  F
Sbjct: 654 VLT---LGESLTETGKAYSVELCGGTHVARTGDIALF 687


>gi|148235110|ref|NP_001079554.1| prolyl-tRNA synthetase 2, mitochondrial (putative) [Xenopus laevis]
 gi|28278090|gb|AAH44273.1| MGC53152 protein [Xenopus laevis]
          Length = 466

 Score = 45.8 bits (107), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 73/372 (19%), Positives = 145/372 (38%), Gaps = 61/372 (16%)

Query: 274 KIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK-------CAD 325
           +  + LI  + ++++D   ++I+ P +    LW+QSG WD     +F +K       C  
Sbjct: 87  RAMEKLIRLIDKEMQDIGGQKIDMPTLGSAALWRQSGRWDLMGKELFRLKDRHNQEYCLG 146

Query: 326 DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRG 385
            T ++L T          H+     G+ + +ELP+ L +    +R+E      GL+R R 
Sbjct: 147 PTHEELVT----------HLVASEGGINN-KELPLLLYQITRKFRDEQRPCF-GLLRGRE 194

Query: 386 FTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
           F   D + F  ++E  +     + +   +I++  G   + V+  T     +G        
Sbjct: 195 FYMKDMYTFDISEESAYETYRNVCDAYSNIFRALGVHFVKVQADT---GNIGGK------ 245

Query: 445 ENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKD------AIGRDWQCGTIQV 498
              M        N  +DR+    L+     +    E +L D        G+  +   I++
Sbjct: 246 ---MSHEFHLPANIGEDRL----LVCGSCDFSANVELLLHDEKNCPVCTGQLKETKGIEI 298

Query: 499 D--FNLPSRFN-AFYVNSHSEKCHPVMIHRAVFG-SIERFIGIMIENFKG----NLPLWL 550
              F L ++++  F  N +  +  P +     +G  + R +   +E        + P  +
Sbjct: 299 GHTFYLGTKYSHVFKANCYDSQKTPFLAEMGCYGIGVSRLLAASLEVLSNEDDIHWPGLI 358

Query: 551 SPIQAIVTTITSSAVEY-AQEIANLLKSHHLSIETDFRNE---------TINYKIREHSI 600
           +P Q  + +    + E  A  +A  L    +      R+E         TI  +++E  +
Sbjct: 359 APYQVCLISPKKGSKEIEAISVAETLYDDIIQSVCGLRDETVLDDRSYLTIGKRVKEAHM 418

Query: 601 KKIPIIIICGDK 612
              P +I+ G K
Sbjct: 419 MGYPYVIVIGKK 430


>gi|195375658|ref|XP_002046617.1| GJ12980 [Drosophila virilis]
 gi|194153775|gb|EDW68959.1| GJ12980 [Drosophila virilis]
          Length = 464

 Score = 45.8 bits (107), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 71/150 (47%), Gaps = 10/150 (6%)

Query: 247 RKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLW 305
           +KL  E+ L     +G+  I       ++    IS ++R +++   ++I+ P +    LW
Sbjct: 30  QKLLMELGLIKSGSNGTYQIM--PIAQRVVDKCISLVQRNMQEAGGQKISLPVLTPAQLW 87

Query: 306 QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAE 364
           +++G  +   +  + V+  D + K    F + P +     A+       SYR+LP+RL +
Sbjct: 88  KKTGRLEGDISEFYMVR--DRSGKQ---FLMSPTHEEAVTAMLATAAPISYRQLPLRLYQ 142

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
            G  +R+E   S  GLMR + F   D + F
Sbjct: 143 IGPKFRDELK-SRFGLMRAKEFLMKDMYTF 171


>gi|260773310|ref|ZP_05882226.1| prolyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
 gi|260612449|gb|EEX37652.1| prolyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
          Length = 548

 Score = 45.8 bits (107), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 65/134 (48%), Gaps = 9/134 (6%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINT--PQVLDQHLWQQSGHWDSYRANMFA 320
           SG+  W   G ++ + + + +R++I D+   I T  P V    LW+++G     R+    
Sbjct: 12  SGLYTWLPTGLRVLRKVENIVRQEI-DNAGAIETLMPVVQPFELWEETG-----RSEKMG 65

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +    T +  R F L P       ++  + + SY++LP+ L +  + +R+E      G+
Sbjct: 66  PELLRFTDRHTRPFVLSPTAEEVITSLVRNEVSSYKQLPLNLYQIQTKFRDERRPRF-GV 124

Query: 381 MRVRGFTQDDAHVF 394
           MR R F+  DA+ F
Sbjct: 125 MRAREFSMMDAYSF 138


>gi|323475075|gb|ADX85681.1| threonyl-tRNA synthetase editing domain protein [Sulfolobus
           islandicus REY15A]
 gi|323477807|gb|ADX83045.1| threonyl-tRNA synthetase editing domain protein [Sulfolobus
           islandicus HVE10/4]
          Length = 386

 Score = 45.8 bits (107), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 20/89 (22%), Positives = 49/89 (55%)

Query: 546 LPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPI 605
           LP WL+PIQ  +  +    ++++ ++A  L+   + +  D  ++++  KIR    + IP+
Sbjct: 269 LPDWLNPIQVRLLPVKKDFLDFSIQVAERLRKEGIRVNIDDLDDSLGNKIRRAGTEWIPL 328

Query: 606 IIICGDKEASERSIGIRRFGSTTTQKVSL 634
           +II G++E    ++ ++   +   + +S+
Sbjct: 329 VIIIGEREVKTSTLTVKIRANNEQKSMSI 357


>gi|315638151|ref|ZP_07893333.1| proline--tRNA ligase [Campylobacter upsaliensis JV21]
 gi|315481687|gb|EFU72309.1| proline--tRNA ligase [Campylobacter upsaliensis JV21]
          Length = 568

 Score = 45.8 bits (107), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 35/150 (23%), Positives = 67/150 (44%), Gaps = 21/150 (14%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHL--------WQQSG 309
           I ++GSG+  +   G  ++  + S ++       EE++    L+  L        W++SG
Sbjct: 32  IEQNGSGLYNFLPLGKMVYSKIESIIK-------EEMDKAGALETSLSFTTPASFWRESG 84

Query: 310 HWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVY 369
            ++ +   +   K   +       F L P +    + V  + + SY++LP+ L + G  +
Sbjct: 85  RYNVFGKELLRFKDRKEN-----DFVLGPTHEEAMLNVVKNKITSYKQLPLNLYQVGLKF 139

Query: 370 RNEPSGSLHGLMRVRGFTQDDAHVFCTKEQ 399
           R+E      GL+R R F   DA+ F   E+
Sbjct: 140 RDEARPRF-GLLRCREFVMKDAYSFHKDEE 168


>gi|323345462|ref|ZP_08085685.1| proline--tRNA ligase [Prevotella oralis ATCC 33269]
 gi|323093576|gb|EFZ36154.1| proline--tRNA ligase [Prevotella oralis ATCC 33269]
          Length = 493

 Score = 45.8 bits (107), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 43/176 (24%), Positives = 77/176 (43%), Gaps = 19/176 (10%)

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           GA      E +++D  G+  Q GT   +  N    F+  Y+N  ++   P  +    +G 
Sbjct: 222 GALDTYTIEAMMQD--GKALQSGTSHFLGQNFAKSFDVTYLNKENK---PEYVWATSWGV 276

Query: 531 IERFIGIMIENFKGN----LPLWLSPIQAIVTTITSSAVEYAQEIANLLKS-----HHLS 581
             R IG +I     +    LP  L+PIQ ++  IT   +E  Q I+  L         L 
Sbjct: 277 STRLIGALIMTHSDDNGLVLPPRLAPIQVVIIPITK-GIEQLQAISAKLSPIIASLRELG 335

Query: 582 IET---DFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           I     D  N+   +K  ++ +K +P+ ++ G ++  + +I + R  +   + VSL
Sbjct: 336 INVKYDDTDNKRPGFKFADYELKGVPVRLVMGGRDLEDNTIEVMRRDTLEKETVSL 391


>gi|21224048|ref|NP_629827.1| prolyl-tRNA synthetase [Streptomyces coelicolor A3(2)]
 gi|256784874|ref|ZP_05523305.1| prolyl-tRNA synthetase [Streptomyces lividans TK24]
 gi|289768768|ref|ZP_06528146.1| prolyl-tRNA synthetase [Streptomyces lividans TK24]
 gi|15214317|sp|Q9KYR6|SYP_STRCO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|7801271|emb|CAB91135.1| prolyl tRNA synthetase [Streptomyces coelicolor A3(2)]
 gi|289698967|gb|EFD66396.1| prolyl-tRNA synthetase [Streptomyces lividans TK24]
          Length = 567

 Score = 45.8 bits (107), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 42/196 (21%), Positives = 84/196 (42%), Gaps = 19/196 (9%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R     ++    +G+  W   G K+   +   +R ++     +E+  P 
Sbjct: 23  DAEVLSHKLLVRA---GYVRRTAAGLWSWLPLGKKVLGNIERIVREEMDAIGAQEVQLPA 79

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L +  ++ +G W  Y   +F  +  D    D        +  P H  +F   +K    S
Sbjct: 80  LLPREPYEATGRWQEYGPELF--RLQDRKGGDY-------LLGPTHEEIFTLLVKDQASS 130

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS- 413
           Y++LPV L +  + YR+E +    G++R R F   D++ F   ++   E   +H      
Sbjct: 131 YKDLPVILYQIQNKYRDE-ARPRAGILRGREFLMKDSYSFDVADEGLAESYALHRAAYQR 189

Query: 414 IYKDFGFEKIMVKLST 429
           I++  G +  +V  + 
Sbjct: 190 IFERLGLDYRIVAATA 205


>gi|302525268|ref|ZP_07277610.1| prolyl-tRNA synthetase [Streptomyces sp. AA4]
 gi|302434163|gb|EFL05979.1| prolyl-tRNA synthetase [Streptomyces sp. AA4]
          Length = 578

 Score = 45.8 bits (107), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 38/160 (23%), Positives = 70/160 (43%), Gaps = 15/160 (9%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           +EI  P +L +  ++ +  W  Y  N+F +K  D    D        +  P H  +F   
Sbjct: 65  QEIQFPALLPREPYEATNRWTEYGDNLFRLK--DRKGADY-------LLGPTHEELFALT 115

Query: 352 LK----SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
           +K    SY++ PV L +  + YR+E +    G++R R F   D++ F   ++      + 
Sbjct: 116 VKGEYSSYKDFPVTLYQIQTKYRDE-ARPRAGILRGREFVMKDSYSFDLDDEGLERSYQA 174

Query: 408 H-NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
           H +  I ++   G E ++V  ++       S+     AEN
Sbjct: 175 HRDAYIKLFDRLGIEYVIVAATSGAMGGSASEEFLAVAEN 214


>gi|297581262|ref|ZP_06943186.1| prolyl-tRNA synthetase [Vibrio cholerae RC385]
 gi|297534578|gb|EFH73415.1| prolyl-tRNA synthetase [Vibrio cholerae RC385]
          Length = 571

 Score = 45.8 bits (107), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 64/135 (47%), Gaps = 9/135 (6%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINT--PQVLDQHLWQQSGHWDSYRANMF 319
            SG+  W   G ++ + + + +R++I D+   I T  P V    LW+++G     R+   
Sbjct: 36  ASGLYTWLPTGLRVLRKVENIVRQEI-DNAGAIETLMPVVQPFELWEETG-----RSEKM 89

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHG 379
             +    T +  R F L P       A+  + + SY++LP+ L +  + +R+E      G
Sbjct: 90  GPELLRFTDRHERPFVLSPTAEEVITALVRNEVSSYKQLPLNLYQIQTKFRDERRPRF-G 148

Query: 380 LMRVRGFTQDDAHVF 394
           +MR R F   DA+ F
Sbjct: 149 VMRAREFCMMDAYSF 163


>gi|154490013|ref|ZP_02030274.1| hypothetical protein PARMER_00242 [Parabacteroides merdae ATCC
           43184]
 gi|154089455|gb|EDN88499.1| hypothetical protein PARMER_00242 [Parabacteroides merdae ATCC
           43184]
          Length = 555

 Score = 45.8 bits (107), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 41/190 (21%), Positives = 77/190 (40%), Gaps = 6/190 (3%)

Query: 11  DGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRS 69
           + + K  P+ ++  D+   +   L  + +   +N K   L+        +E +       
Sbjct: 12  NNTYKEVPIGSSLLDIYSLVGAPLRLRPMNAQVNNKTEGLTFRCWHPKDVEYVDYTQLSG 71

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           +     S  HI ++AV  + P   + +   I  G+Y      +    + + +I+K+M+EI
Sbjct: 72  MRTYVRSLCHIFSKAVNDVLPSATLNLEHPISKGYYCVIHNGKDIDEETIGKIKKRMREI 131

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILES--IPAKENVTLYRQGEWFDLCRGPH 187
           I  D PF  + +    A  LF  +    K  ++ES  +P      L     +F  C  P 
Sbjct: 132 IDADLPFHLKTIRTIDAAVLFRERGMNDKARLIESAGMPYTSYYELDGYINYFYGCLTP- 190

Query: 188 VRSTGQVKKF 197
             STG ++ F
Sbjct: 191 --STGYIQVF 198


>gi|118474251|ref|YP_891864.1| prolyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40]
 gi|152016592|sp|A0RNT1|SYP_CAMFF RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|118413477|gb|ABK81897.1| prolyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40]
          Length = 567

 Score = 45.8 bits (107), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 35/142 (24%), Positives = 65/142 (45%), Gaps = 7/142 (4%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           +A+ GSG+  +   G ++ + + + +R ++ K    E+    V+   LW+QS  +  +  
Sbjct: 32  VAQIGSGLYNFLPLGKRVLRKVENIVRDEMDKAGANEVALSFVVPGELWKQSRRYFKFGK 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            +  +K   D       F L P +    V +    + SY++LP+ L + G  +R+E    
Sbjct: 92  ELLRLKDRKDN-----DFLLAPTHEESIVDLVRDKVTSYKQLPLHLYQIGLKFRDEARPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTKE 398
             GL+R R F   D + F   E
Sbjct: 147 F-GLLRCREFIMKDGYSFHASE 167


>gi|298499001|ref|ZP_07008808.1| prolyl-tRNA synthetase [Vibrio cholerae MAK 757]
 gi|297543334|gb|EFH79384.1| prolyl-tRNA synthetase [Vibrio cholerae MAK 757]
          Length = 571

 Score = 45.8 bits (107), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 64/135 (47%), Gaps = 9/135 (6%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINT--PQVLDQHLWQQSGHWDSYRANMF 319
            SG+  W   G ++ + + + +R++I D+   I T  P V    LW+++G     R+   
Sbjct: 36  ASGLYTWLPTGLRVLRKVENIVRQEI-DNAGAIETLMPVVQPFELWEETG-----RSEKM 89

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHG 379
             +    T +  R F L P       A+  + + SY++LP+ L +  + +R+E      G
Sbjct: 90  GPELLRFTDRHERPFVLSPTAEEVITALVRNEVSSYKQLPLNLYQIQTKFRDERRPRF-G 148

Query: 380 LMRVRGFTQDDAHVF 394
           +MR R F   DA+ F
Sbjct: 149 VMRAREFCMMDAYSF 163


>gi|255013835|ref|ZP_05285961.1| prolyl-tRNA synthetase [Bacteroides sp. 2_1_7]
 gi|256839822|ref|ZP_05545331.1| prolyl-tRNA synthetase [Parabacteroides sp. D13]
 gi|298375581|ref|ZP_06985538.1| proline--tRNA ligase [Bacteroides sp. 3_1_19]
 gi|256738752|gb|EEU52077.1| prolyl-tRNA synthetase [Parabacteroides sp. D13]
 gi|298268081|gb|EFI09737.1| proline--tRNA ligase [Bacteroides sp. 3_1_19]
          Length = 493

 Score = 45.8 bits (107), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 65/290 (22%), Positives = 122/290 (42%), Gaps = 56/290 (19%)

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECL 405
            + + ++SYR+LP+   ++ +V R E    L   +R   F   + H    T+E+   E  
Sbjct: 134 TYRNWIQSYRDLPILCNQWANVMRWEMRTRL--FLRTAEFLWQEGHTAHATREEAEIEAK 191

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
           K+      +Y +F  E  M                   A  ++KGV      S  +R   
Sbjct: 192 KMQ----EVYANFA-ENYM-------------------AMPVIKGV-----KSESERF-- 220

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIH 524
                 GA      E +++D  G+  Q GT   +  N    F+  +++ + +  +     
Sbjct: 221 -----AGALDTYTIEAMMQD--GKALQAGTSHFLGQNFGKAFDVTFIDKNGKSDYAWATS 273

Query: 525 RAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTITSSAVEYAQ---EIANL--- 574
              +G   R IG +I +   +    LP  L+PIQ ++  I  SA + AQ   ++A +   
Sbjct: 274 ---WGVSTRLIGALIMSHSDDNGLVLPPHLAPIQVVIVPIYRSAEQLAQISEKVAGIVAK 330

Query: 575 LKSHHLSIE-TDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRR 623
           LK+  +S++  D  N+   +K  E+ +K +P+ +  G ++    +I + R
Sbjct: 331 LKALGISVKYDDADNKKPGWKFAEYELKGVPVRLAMGGRDLENNTIEVMR 380


>gi|153802043|ref|ZP_01956629.1| prolyl-tRNA synthetase [Vibrio cholerae MZO-3]
 gi|124122402|gb|EAY41145.1| prolyl-tRNA synthetase [Vibrio cholerae MZO-3]
          Length = 571

 Score = 45.8 bits (107), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 64/135 (47%), Gaps = 9/135 (6%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINT--PQVLDQHLWQQSGHWDSYRANMF 319
            SG+  W   G ++ + + + +R++I D+   I T  P V    LW+++G     R+   
Sbjct: 36  ASGLYTWLPTGLRVLRKVENIVRQEI-DNAGAIETLMPVVQPFELWEETG-----RSEKM 89

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHG 379
             +    T +  R F L P       A+  + + SY++LP+ L +  + +R+E      G
Sbjct: 90  GPELLRFTDRHERPFVLSPTAEEVITALVRNEVSSYKQLPLNLYQIQTKFRDERRPRF-G 148

Query: 380 LMRVRGFTQDDAHVF 394
           +MR R F   DA+ F
Sbjct: 149 VMRAREFCMMDAYSF 163


>gi|301065031|ref|ZP_07205376.1| proline--tRNA ligase [delta proteobacterium NaphS2]
 gi|300440880|gb|EFK05300.1| proline--tRNA ligase [delta proteobacterium NaphS2]
          Length = 575

 Score = 45.8 bits (107), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 62/141 (43%), Gaps = 7/141 (4%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG+  +   G K  + + + +R ++ +    E+  P V    LWQ+SG W+ Y   +   
Sbjct: 37  SGIYTYLPVGLKSIRKVENIVREEMNRAGAIEVLMPAVQPAELWQESGRWEYYGRELLRF 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           K   D     R   + P +      +    + SY+++P+ L +  + +R+E      G+M
Sbjct: 97  KDRHD-----RDACMGPTHEEVITDLVRKEIHSYKQMPINLYQIQTKFRDEIRPRF-GIM 150

Query: 382 RVRGFTQDDAHVFCTKEQMFN 402
           R R F   DA+ F   E   N
Sbjct: 151 RGREFIMKDAYSFDVDEAGAN 171


>gi|289662681|ref|ZP_06484262.1| alanyl-tRNA synthetase [Xanthomonas campestris pv. vasculorum
           NCPPB702]
 gi|289669644|ref|ZP_06490719.1| alanyl-tRNA synthetase [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 882

 Score = 45.8 bits (107), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 33/132 (25%), Positives = 59/132 (44%), Gaps = 10/132 (7%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKM 126
           R   ++ HS  H++  A++ +    VQ     +  D   +DF   QP ++DELA IE+K+
Sbjct: 563 RGKTILNHSATHLLHAALREVLGTHVQQKGSLVAPDRLRFDFSHFQPITADELAVIERKV 622

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRG 185
              +  +       ++ ++A +        +    L      ENV + + G +  +LC G
Sbjct: 623 NAEVRTNHGVEVHNMAMQEALD--------FGAMALFGEKYGENVRVLKMGGYSTELCGG 674

Query: 186 PHVRSTGQVKKF 197
            HV  TG +  F
Sbjct: 675 THVTRTGDIGLF 686


>gi|254285550|ref|ZP_04960514.1| prolyl-tRNA synthetase [Vibrio cholerae AM-19226]
 gi|150424412|gb|EDN16349.1| prolyl-tRNA synthetase [Vibrio cholerae AM-19226]
          Length = 571

 Score = 45.8 bits (107), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 64/135 (47%), Gaps = 9/135 (6%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINT--PQVLDQHLWQQSGHWDSYRANMF 319
            SG+  W   G ++ + + + +R++I D+   I T  P V    LW+++G     R+   
Sbjct: 36  ASGLYTWLPTGLRVLRKVENIVRQEI-DNAGAIETLMPVVQPFELWEETG-----RSEKM 89

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHG 379
             +    T +  R F L P       A+  + + SY++LP+ L +  + +R+E      G
Sbjct: 90  GPELLRFTDRHERPFVLSPTAEEVITALVRNEVSSYKQLPLNLYQIQTKFRDERRPRF-G 148

Query: 380 LMRVRGFTQDDAHVF 394
           +MR R F   DA+ F
Sbjct: 149 VMRAREFCMMDAYSF 163


>gi|297707684|ref|XP_002830625.1| PREDICTED: 39S ribosomal protein L39, mitochondrial-like isoform 2
           [Pongo abelii]
          Length = 353

 Score = 45.8 bits (107), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 86/192 (44%), Gaps = 24/192 (12%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIR---HS 76
           +T    A  +S    +K++   ++G+  D+  P+ +   I+ +T +D     V +    S
Sbjct: 86  STPYSCAMHLSEWYCRKSILALVDGQPWDMYKPLTKSCEIKFLTFKDRDPGEVNKAYWRS 145

Query: 77  CAHIMAEAVQSIWPE------VQVAIGPIIEDGFYYD------FDKEQPFSSDELAQIEK 124
           CA IM   ++  + +      V+    P+I   F YD       D+  P + + L    K
Sbjct: 146 CAMIMGCVIERAFKDEYMVNLVRAPEVPVISGAFCYDVVLDSKLDEWMP-TKENLRSFTK 204

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN----VTLYRQGEWF 180
               +I +D PF    +  + A E+F+  K  YK++ +E   A +N    V L+R G++ 
Sbjct: 205 DAHALIYKDLPFETLEVEAKVALEIFQHNK--YKIDFIEE-KASQNPERIVKLHRIGDFI 261

Query: 181 DLCRGPHVRSTG 192
           D+  GP +  T 
Sbjct: 262 DVSEGPLIPRTS 273


>gi|261749283|ref|YP_003256968.1| serine-tRNA synthetase [Blattabacterium sp. (Periplaneta americana)
           str. BPLAN]
 gi|261497375|gb|ACX83825.1| serine-tRNA synthetase [Blattabacterium sp. (Periplaneta americana)
           str. BPLAN]
          Length = 424

 Score = 45.8 bits (107), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 77/165 (46%), Gaps = 18/165 (10%)

Query: 246 HRKLAREMDLFHIAED----GSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQVL 300
           H +LA++  LF +       GSG   +  KG K+ + LI Y + + I+  Y+E + P ++
Sbjct: 144 HWELAKKFQLFDLYLGTKICGSGFPVYIGKGAKLQRGLIQYFLDKNIQASYKEYSFPYLI 203

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++     +G        M+ ++   D    + T  +  MNC      + + L SY++LP+
Sbjct: 204 NEISGYSTGQIPDKEGQMYLIE--KDNFYLIPTGEIPLMNC------YRNNLLSYKDLPI 255

Query: 361 RLAEFGSVYRNEPSGS----LHGLMRVRGFTQDDAHVFCTKEQMF 401
           +   + S +R E +GS    + GL R+  F + +     T +  F
Sbjct: 256 KSTTYTSCFRRE-AGSYGSKVRGLNRLHQFEKVEIIQITTPDTSF 299


>gi|15640891|ref|NP_230522.1| prolyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121585725|ref|ZP_01675520.1| prolyl-tRNA synthetase [Vibrio cholerae 2740-80]
 gi|121728341|ref|ZP_01681371.1| prolyl-tRNA synthetase [Vibrio cholerae V52]
 gi|147673158|ref|YP_001216355.1| prolyl-tRNA synthetase [Vibrio cholerae O395]
 gi|153819016|ref|ZP_01971683.1| prolyl-tRNA synthetase [Vibrio cholerae NCTC 8457]
 gi|153823083|ref|ZP_01975750.1| prolyl-tRNA synthetase [Vibrio cholerae B33]
 gi|227081051|ref|YP_002809602.1| prolyl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|229505518|ref|ZP_04395028.1| prolyl-tRNA synthetase [Vibrio cholerae BX 330286]
 gi|229510812|ref|ZP_04400291.1| prolyl-tRNA synthetase [Vibrio cholerae B33]
 gi|229517932|ref|ZP_04407376.1| prolyl-tRNA synthetase [Vibrio cholerae RC9]
 gi|229608537|ref|YP_002879185.1| prolyl-tRNA synthetase [Vibrio cholerae MJ-1236]
 gi|254848011|ref|ZP_05237361.1| prolyl-tRNA synthetase [Vibrio cholerae MO10]
 gi|255744669|ref|ZP_05418620.1| prolyl-tRNA synthetase [Vibrio cholera CIRS 101]
 gi|262161198|ref|ZP_06030309.1| prolyl-tRNA synthetase [Vibrio cholerae INDRE 91/1]
 gi|262168701|ref|ZP_06036396.1| prolyl-tRNA synthetase [Vibrio cholerae RC27]
 gi|81858145|sp|Q9KTM7|SYP_VIBCH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|172047427|sp|A5F340|SYP_VIBC3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|254782925|sp|C3LTC5|SYP_VIBCM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|9655329|gb|AAF94037.1| prolyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121550088|gb|EAX60104.1| prolyl-tRNA synthetase [Vibrio cholerae 2740-80]
 gi|121629396|gb|EAX61826.1| prolyl-tRNA synthetase [Vibrio cholerae V52]
 gi|126510449|gb|EAZ73043.1| prolyl-tRNA synthetase [Vibrio cholerae NCTC 8457]
 gi|126519409|gb|EAZ76632.1| prolyl-tRNA synthetase [Vibrio cholerae B33]
 gi|146315041|gb|ABQ19580.1| prolyl-tRNA synthetase [Vibrio cholerae O395]
 gi|227008939|gb|ACP05151.1| prolyl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|227012695|gb|ACP08905.1| prolyl-tRNA synthetase [Vibrio cholerae O395]
 gi|229344647|gb|EEO09621.1| prolyl-tRNA synthetase [Vibrio cholerae RC9]
 gi|229350777|gb|EEO15718.1| prolyl-tRNA synthetase [Vibrio cholerae B33]
 gi|229357741|gb|EEO22658.1| prolyl-tRNA synthetase [Vibrio cholerae BX 330286]
 gi|229371192|gb|ACQ61615.1| prolyl-tRNA synthetase [Vibrio cholerae MJ-1236]
 gi|254843716|gb|EET22130.1| prolyl-tRNA synthetase [Vibrio cholerae MO10]
 gi|255737700|gb|EET93094.1| prolyl-tRNA synthetase [Vibrio cholera CIRS 101]
 gi|262022819|gb|EEY41525.1| prolyl-tRNA synthetase [Vibrio cholerae RC27]
 gi|262028948|gb|EEY47601.1| prolyl-tRNA synthetase [Vibrio cholerae INDRE 91/1]
          Length = 571

 Score = 45.8 bits (107), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 64/135 (47%), Gaps = 9/135 (6%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINT--PQVLDQHLWQQSGHWDSYRANMF 319
            SG+  W   G ++ + + + +R++I D+   I T  P V    LW+++G     R+   
Sbjct: 36  ASGLYTWLPTGLRVLRKVENIVRQEI-DNAGAIETLMPVVQPFELWEETG-----RSEKM 89

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHG 379
             +    T +  R F L P       A+  + + SY++LP+ L +  + +R+E      G
Sbjct: 90  GPELLRFTDRHERPFVLSPTAEEVITALVRNEVSSYKQLPLNLYQIQTKFRDERRPRF-G 148

Query: 380 LMRVRGFTQDDAHVF 394
           +MR R F   DA+ F
Sbjct: 149 VMRAREFCMMDAYSF 163


>gi|229523326|ref|ZP_04412733.1| prolyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
 gi|229339689|gb|EEO04704.1| prolyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
          Length = 571

 Score = 45.8 bits (107), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 64/135 (47%), Gaps = 9/135 (6%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINT--PQVLDQHLWQQSGHWDSYRANMF 319
            SG+  W   G ++ + + + +R++I D+   I T  P V    LW+++G     R+   
Sbjct: 36  ASGLYTWLPTGLRVLRKVENIVRQEI-DNAGAIETLMPVVQPFELWEETG-----RSEKM 89

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHG 379
             +    T +  R F L P       A+  + + SY++LP+ L +  + +R+E      G
Sbjct: 90  GPELLRFTDRHERPFVLSPTAEEVITALVRNEVSSYKQLPLNLYQIQTKFRDERRPRF-G 148

Query: 380 LMRVRGFTQDDAHVF 394
           +MR R F   DA+ F
Sbjct: 149 VMRAREFCMMDAYSF 163


>gi|154492734|ref|ZP_02032360.1| hypothetical protein PARMER_02371 [Parabacteroides merdae ATCC
           43184]
 gi|154087039|gb|EDN86084.1| hypothetical protein PARMER_02371 [Parabacteroides merdae ATCC
           43184]
          Length = 493

 Score = 45.8 bits (107), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 66/300 (22%), Positives = 123/300 (41%), Gaps = 56/300 (18%)

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECL 405
            + + ++SYR+LP+   ++ +V R E    L   +R   F   + H    T+E+   E  
Sbjct: 134 TYRNWIQSYRDLPILCNQWANVMRWEMRTRL--FLRTAEFLWQEGHTAHATREEAEIEAK 191

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
           K+      +Y DF  E  M                   A  ++KGV      S+ +R   
Sbjct: 192 KMQ----GVYADFA-ENYM-------------------AMPVIKGV-----KSASERF-- 220

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIH 524
                 GA      E +++D  G+  Q GT   +  N    F+  +++ + +  +     
Sbjct: 221 -----AGALDTYTIEAMMQD--GKALQAGTSHFLGQNFGKAFDVTFIDKNGKSDYAWATS 273

Query: 525 RAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTITSSAVEYAQ------EIANL 574
              +G   R IG +I +   +    LP  L+PIQ ++  I  S  + AQ       I   
Sbjct: 274 ---WGVSTRLIGALIMSHSDDNGLVLPPHLAPIQVVIIPIYRSEEQLAQISEKVNGIVAK 330

Query: 575 LKSHHLSIETD-FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
           LK+  +S++ D   N+   +K  E+ +K +P+ +  G ++    +I + R  +   + V+
Sbjct: 331 LKALGISVKFDNADNKKPGWKFAEYELKGVPVRLAMGGRDLENNTIEVMRRDTLEKETVT 390


>gi|324998197|ref|ZP_08119309.1| prolyl-tRNA synthetase [Pseudonocardia sp. P1]
          Length = 577

 Score = 45.8 bits (107), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 43/196 (21%), Positives = 86/196 (43%), Gaps = 19/196 (9%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +  +A    GV  W   G K+ + + + +R ++     +EI  P 
Sbjct: 15  DAEVPSHKLLVRAGYVRRVA---PGVYSWLPLGLKVLRRIENVVREEMDAMGGQEIQFPA 71

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L +  ++ +  W  Y   +F ++  D    D        +  P H  +F   +K    S
Sbjct: 72  LLPREPYEATNRWTEYGPALFRIQ--DRKGGDY-------LLGPTHEELFTLAVKGEYSS 122

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH-NLIIS 413
           Y++ PV L +  + YR+E      G++R R F   D++ F   ++  +E    H +  I 
Sbjct: 123 YKDYPVVLYQIQTKYRDEER-PRAGILRGREFLMKDSYSFDLSDEGLSESYGKHRDTYIR 181

Query: 414 IYKDFGFEKIMVKLST 429
           I+     + ++V  ++
Sbjct: 182 IFDRLALKYVIVAATS 197


>gi|307244722|ref|ZP_07526824.1| proline--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
 gi|306491899|gb|EFM63950.1| proline--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
          Length = 481

 Score = 45.8 bits (107), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 71/314 (22%), Positives = 128/314 (40%), Gaps = 59/314 (18%)

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH- 392
            A++P +      ++   L SYR+LP    ++ SV R E S      +R   F   + H 
Sbjct: 111 LAVRPTSETIICTMYAKWLNSYRQLPFLYNQWNSVVRWEKS--TRPFLRTSEFLWQEGHT 168

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMK-GV 451
           +  T+++  +E L+                   +L+T   K+V        AE++M   V
Sbjct: 169 IHETEQEAIDETLQ-------------------QLATY--KKV--------AEDLMAIPV 199

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAI--GRDWQCGTIQ-VDFNLPSRFNA 508
           +D  K+ S+             F G    Y ++  +  G+  Q GT   +  +    F+ 
Sbjct: 200 IDGKKSESE------------KFAGASDTYTIEAMMHDGKALQSGTSHFLGQHFTKAFDI 247

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTITSS- 563
            + +      HP   +   +G   R IG +I     N    LP  ++P Q I+  I ++ 
Sbjct: 248 TFSDRDGNLAHP---YHTSWGISTRLIGGLIMVHSDNRGLVLPPKMAPTQVIIIPIAANK 304

Query: 564 --AVEYAQEIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIG 620
              +E   ++A  LK+  +++E D R N +  YK  +  +K IP+ +  G K+  +    
Sbjct: 305 GGVMEVVDKVAADLKAKGITVEVDDRSNYSPGYKFNDAEMKGIPVRLEIGPKDIEKNQAL 364

Query: 621 IRRFGSTTTQKVSL 634
             R    T  ++SL
Sbjct: 365 AFRRDELTKSEMSL 378


>gi|229525492|ref|ZP_04414897.1| prolyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
 gi|229339073|gb|EEO04090.1| prolyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
 gi|327483617|gb|AEA78024.1| Prolyl-tRNA synthetase Bacterial type [Vibrio cholerae LMA3894-4]
          Length = 571

 Score = 45.8 bits (107), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 64/135 (47%), Gaps = 9/135 (6%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINT--PQVLDQHLWQQSGHWDSYRANMF 319
            SG+  W   G ++ + + + +R++I D+   I T  P V    LW+++G     R+   
Sbjct: 36  ASGLYTWLPTGLRVLRKVENIVRQEI-DNAGAIETLMPVVQPFELWEETG-----RSEKM 89

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHG 379
             +    T +  R F L P       A+  + + SY++LP+ L +  + +R+E      G
Sbjct: 90  GPELLRFTDRHERPFVLSPTAEEVITALVRNEVSSYKQLPLNLYQIQTKFRDERRPRF-G 148

Query: 380 LMRVRGFTQDDAHVF 394
           +MR R F   DA+ F
Sbjct: 149 VMRAREFCMMDAYSF 163


>gi|31958|emb|CAA38224.1| glutaminyl-tRNA synthetase [Homo sapiens]
 gi|45643460|gb|AAS72877.1| proliferation-inducing protein 32 [Homo sapiens]
          Length = 1440

 Score = 45.8 bits (107), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 68/307 (22%), Positives = 118/307 (38%), Gaps = 55/307 (17%)

Query: 334  FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH- 392
             A++P +       +   ++S+R+LP++L ++ +V R E        +R R F   + H 
Sbjct: 1044 IAIRPTSETVMYPAYAKWVQSHRDLPIKLNQWCNVVRWEFKHP-QPFLRTREFLWQEGHS 1102

Query: 393  VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
             F T E+   E L+I +L   +Y++     ++    T  EK  G D             +
Sbjct: 1103 AFATMEEAAEEVLQILDLYAQVYEELLAIPVVKGRKTEKEKFAGGD---------YTTTI 1153

Query: 453  DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
            +   ++S   I  G     G  +   FE + +D                +P      Y N
Sbjct: 1154 EAFISASGRAIQGGTSHHLGQNFSKMFEIVFEDP--------------KIPGEKQFAYQN 1199

Query: 513  SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTT------ITSSAVE 566
            S              +G   R IG+M      N+ L L P  A V        IT++  E
Sbjct: 1200 S--------------WGLTTRTIGVMTMVHGDNMGLVLPPRVACVQVVIIPCGITNALSE 1245

Query: 567  YAQE--IANL------LKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKE-ASE 616
              +E  IA        L S ++ +  D R N +  +K     +K +PI +  G ++  S 
Sbjct: 1246 EDKEALIAKCNDYRRRLLSVNIRVRADLRDNYSPGWKFNHWELKGVPIRLEVGPRDMKSC 1305

Query: 617  RSIGIRR 623
            + + +RR
Sbjct: 1306 QFVAVRR 1312


>gi|163938025|ref|YP_001642909.1| seryl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|229009527|ref|ZP_04166756.1| Seryl-tRNA synthetase [Bacillus mycoides DSM 2048]
 gi|229053863|ref|ZP_04195300.1| Seryl-tRNA synthetase [Bacillus cereus AH603]
 gi|229131024|ref|ZP_04259940.1| Seryl-tRNA synthetase [Bacillus cereus BDRD-ST196]
 gi|229165006|ref|ZP_04292804.1| Seryl-tRNA synthetase [Bacillus cereus AH621]
 gi|163860222|gb|ABY41281.1| seryl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|228618458|gb|EEK75485.1| Seryl-tRNA synthetase [Bacillus cereus AH621]
 gi|228652436|gb|EEL08357.1| Seryl-tRNA synthetase [Bacillus cereus BDRD-ST196]
 gi|228721473|gb|EEL72990.1| Seryl-tRNA synthetase [Bacillus cereus AH603]
 gi|228751738|gb|EEM01535.1| Seryl-tRNA synthetase [Bacillus mycoides DSM 2048]
          Length = 424

 Score = 45.8 bits (107), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 36/153 (23%), Positives = 66/153 (43%), Gaps = 13/153 (8%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDD--YEEINTPQVLDQHLWQQSGHWDSYRANMF 319
           GS  +F+   G ++ + LIS+M     D+  YEE+  P ++++     +G    +  + F
Sbjct: 160 GSRFVFYKGAGARLERALISFMLDLHTDEHGYEEVLPPYMVNRASMTGTGQLPKFEEDAF 219

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS--- 376
            ++  D        + L P        +    + S  +LP+R A F S +R+E   +   
Sbjct: 220 RIESED--------YFLIPTAEVPVTNMHRDEIVSKEQLPIRYAAFSSCFRSEAGSAGRD 271

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
             GL+R   F + +   F   E  + E  K+ N
Sbjct: 272 TRGLIRQHQFNKVELVKFVKPEDSYEELEKLTN 304


>gi|83955444|ref|ZP_00964075.1| alanyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1]
 gi|83840088|gb|EAP79263.1| alanyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1]
          Length = 886

 Score = 45.8 bits (107), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 31/132 (23%), Positives = 61/132 (46%), Gaps = 6/132 (4%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPI-IEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++ EA++    +  +  G +   D   +D+      ++D+LA +E+++   I ++
Sbjct: 563 HSATHLLNEALRKTLGDHVMQRGSLNAADRLRFDYSHNHAMTTDQLAAVEEEVNSYIRQN 622

Query: 134 SPFLKQYLSHEKARELFESK--KEAYKVEILESIPAKENVT---LYRQGEWFDLCRGPHV 188
           +    + ++ + ARE+       E Y  E+      +E  +     +Q    +LC G HV
Sbjct: 623 TAVETRIMTPDDAREMGAQALFGEKYGDEVRVVSMGREAGSGKGADKQTYSLELCGGTHV 682

Query: 189 RSTGQVKKFFKL 200
           R TG +  F  L
Sbjct: 683 RQTGDIGAFVLL 694


>gi|166154604|ref|YP_001654722.1| prolyl-tRNA synthetase [Chlamydia trachomatis 434/Bu]
 gi|166155479|ref|YP_001653734.1| prolyl-tRNA synthetase [Chlamydia trachomatis L2b/UCH-1/proctitis]
 gi|301335871|ref|ZP_07224115.1| prolyl-tRNA synthetase [Chlamydia trachomatis L2tet1]
 gi|226699129|sp|B0B7W3|SYP_CHLT2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226699130|sp|B0BC28|SYP_CHLTB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|165930592|emb|CAP04089.1| prolyl-tRNA synthetase [Chlamydia trachomatis 434/Bu]
 gi|165931467|emb|CAP07043.1| prolyl-tRNA synthetase [Chlamydia trachomatis L2b/UCH-1/proctitis]
          Length = 581

 Score = 45.8 bits (107), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 38/173 (21%), Positives = 75/173 (43%), Gaps = 14/173 (8%)

Query: 263 SGVIFWHRKG----WKIFQTLISYMRRKIKDDY-----EEINTPQVLDQHLWQQSGHWDS 313
           +G +F   KG      +FQ +I  M   I+++      +E+  P +    LW+++G W +
Sbjct: 29  AGYLFKTSKGIYSYTPLFQRVILKMTEIIREELNAIGGQEVCLPLLQPAELWEKTGRWKA 88

Query: 314 YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP 373
           + +        D   ++ +   L P +           L    +LP+ L + G+ +R+E 
Sbjct: 89  FLSEKLLYVLKD---RENKAMCLAPTHEEVVSEFVAQWLTGREQLPIHLYQIGTKFRDEI 145

Query: 374 SGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
                GLMR + F  +D++ F  + EQM  +  K+      I+     + ++V
Sbjct: 146 RPRF-GLMRAKEFLMEDSYTFSDSPEQMEEQYAKLRLAYQRIFDRLNLKYVIV 197


>gi|254225105|ref|ZP_04918719.1| prolyl-tRNA synthetase [Vibrio cholerae V51]
 gi|125622492|gb|EAZ50812.1| prolyl-tRNA synthetase [Vibrio cholerae V51]
          Length = 571

 Score = 45.8 bits (107), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 64/135 (47%), Gaps = 9/135 (6%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINT--PQVLDQHLWQQSGHWDSYRANMF 319
            SG+  W   G ++ + + + +R++I D+   I T  P V    LW+++G     R+   
Sbjct: 36  ASGLYTWLPTGLRVLRKVENIVRQEI-DNAGAIETLMPVVQPFELWEETG-----RSEKM 89

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHG 379
             +    T +  R F L P       A+  + + SY++LP+ L +  + +R+E      G
Sbjct: 90  GPELLRFTDRHERPFVLSPTAEEVITALVRNEVSSYKQLPLNLYQIQTKFRDERRPRF-G 148

Query: 380 LMRVRGFTQDDAHVF 394
           +MR R F   DA+ F
Sbjct: 149 VMRAREFCMMDAYSF 163


>gi|282881336|ref|ZP_06290016.1| proline--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
 gi|281304812|gb|EFA96892.1| proline--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
          Length = 493

 Score = 45.8 bits (107), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 67/324 (20%), Positives = 134/324 (41%), Gaps = 79/324 (24%)

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
            + + +KS+R+LP+   ++ +V R E        MR R F +       T E ++ E   
Sbjct: 134 TYKNWIKSWRDLPLMCNQWCNVMRWE--------MRTRPFLR-------TSEFLWQEGHT 178

Query: 407 IHNL----------IISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIK 456
            H            ++ +Y DF  + + V                     +++GV     
Sbjct: 179 AHATREEAEAEAQKMLKVYADFAEQWMAVP--------------------VVQGV----- 213

Query: 457 NSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHS 515
            S  +R         GA      E +++D  G+  Q GT   +  N    F+  Y+N  +
Sbjct: 214 KSETERF-------AGALDTYTIEAMMQD--GKALQSGTSHFLGQNFAKSFDVTYLNKEN 264

Query: 516 EKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTITSSAVEYA--- 568
           +   P  +    +G   R IG +I     +    LP  L+PIQ ++  I+ ++ +     
Sbjct: 265 K---PEYVWATSWGVSTRLIGALIMTHSDDNGLVLPPRLAPIQVVIVPISKTSEQLKAIH 321

Query: 569 ---QEIANLLKSHHLSIETDFRNETI--NYKIREHSIKKIPIIIICGDKEASERSIGIRR 623
              + I + L++  ++++ D  N+T    +K  ++ +K +P+ ++ G ++    +I + R
Sbjct: 322 DQLKPIIDGLRAMGITVKFD-DNDTKRPGFKFADYELKGVPVRLVMGGRDLENNTIEVMR 380

Query: 624 FGSTTTQKVSL---LDAIPILTKE 644
             +   + VSL   L+ +P L +E
Sbjct: 381 RDTLQKETVSLEKILEYVPKLLEE 404


>gi|91223451|ref|ZP_01258716.1| prolyl-tRNA synthetase [Vibrio alginolyticus 12G01]
 gi|269966231|ref|ZP_06180320.1| prolyl-tRNA synthetase [Vibrio alginolyticus 40B]
 gi|91191537|gb|EAS77801.1| prolyl-tRNA synthetase [Vibrio alginolyticus 12G01]
 gi|269829146|gb|EEZ83391.1| prolyl-tRNA synthetase [Vibrio alginolyticus 40B]
          Length = 571

 Score = 45.8 bits (107), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 34/134 (25%), Positives = 66/134 (49%), Gaps = 9/134 (6%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINT--PQVLDQHLWQQSGHWDSYRANMFA 320
           SG+  W   G ++ + + + +R++I D+   + T  P V    LW+++G     R+    
Sbjct: 37  SGLYTWLPTGLRVLRKVENIVRQEI-DNAGAVETLMPVVQPFELWEETG-----RSEKMG 90

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +    T + +R F L P       ++  + + SY++LP+ L +  + +R+E      G+
Sbjct: 91  PELLRFTDRHVRPFVLSPTAEEVITSLVRNEVSSYKQLPLNLYQIQTKFRDERRPRF-GV 149

Query: 381 MRVRGFTQDDAHVF 394
           MR R F+  DA+ F
Sbjct: 150 MRSREFSMMDAYSF 163


>gi|28899107|ref|NP_798712.1| prolyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|260364768|ref|ZP_05777355.1| proline--tRNA ligase [Vibrio parahaemolyticus K5030]
 gi|260876810|ref|ZP_05889165.1| proline--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|260895895|ref|ZP_05904391.1| proline--tRNA ligase [Vibrio parahaemolyticus Peru-466]
 gi|81839761|sp|Q87MC3|SYP_VIBPA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|28807331|dbj|BAC60596.1| prolyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|308089375|gb|EFO39070.1| proline--tRNA ligase [Vibrio parahaemolyticus Peru-466]
 gi|308091476|gb|EFO41171.1| proline--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|308115298|gb|EFO52838.1| proline--tRNA ligase [Vibrio parahaemolyticus K5030]
 gi|328474355|gb|EGF45160.1| prolyl-tRNA synthetase [Vibrio parahaemolyticus 10329]
          Length = 571

 Score = 45.8 bits (107), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 38/163 (23%), Positives = 73/163 (44%), Gaps = 10/163 (6%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINT--PQVLDQHLWQQSGHWDSYRANMF 319
            SG+  W   G ++ + + + +R++I D+   + T  P V    LW+++G     R+   
Sbjct: 36  ASGLYTWLPTGLRVLRKVENIVRQEI-DNAGAVETLMPVVQPFELWEETG-----RSEKM 89

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHG 379
             +    T + +R F L P       ++  + + SY++LP+ L +  + +R+E      G
Sbjct: 90  GPELLRFTDRHVRPFVLSPTAEEVITSLVRNEVSSYKQLPLNLYQIQTKFRDERRPRF-G 148

Query: 380 LMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFE 421
           +MR R F   DA+ F   K  +      +H+     +   G E
Sbjct: 149 VMRAREFCMMDAYSFDIDKAGLEKSYQAMHDAYCKAFDRMGLE 191


>gi|254229498|ref|ZP_04922912.1| prolyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|262393498|ref|YP_003285352.1| prolyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|151937963|gb|EDN56807.1| prolyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|262337092|gb|ACY50887.1| prolyl-tRNA synthetase [Vibrio sp. Ex25]
          Length = 571

 Score = 45.8 bits (107), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 34/134 (25%), Positives = 66/134 (49%), Gaps = 9/134 (6%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINT--PQVLDQHLWQQSGHWDSYRANMFA 320
           SG+  W   G ++ + + + +R++I D+   + T  P V    LW+++G     R+    
Sbjct: 37  SGLYTWLPTGLRVLRKVENIVRQEI-DNAGAVETLMPVVQPFELWEETG-----RSEKMG 90

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +    T + +R F L P       ++  + + SY++LP+ L +  + +R+E      G+
Sbjct: 91  PELLRFTDRHVRPFVLSPTAEEVITSLVRNEVSSYKQLPLNLYQIQTKFRDERRPRF-GV 149

Query: 381 MRVRGFTQDDAHVF 394
           MR R F+  DA+ F
Sbjct: 150 MRSREFSMMDAYSF 163


>gi|330823518|ref|YP_004386821.1| Prolyl-tRNA synthetase [Alicycliphilus denitrificans K601]
 gi|329308890|gb|AEB83305.1| Prolyl-tRNA synthetase [Alicycliphilus denitrificans K601]
          Length = 581

 Score = 45.8 bits (107), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 31/134 (23%), Positives = 63/134 (47%), Gaps = 7/134 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           G+G+  +   G ++ + + + +R ++ +    E   P V    LWQ++G ++     +  
Sbjct: 36  GAGIYSYMPMGLRVIRKVEAIVREEMNRAGAVECTMPVVQPAELWQETGRFEKMGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           ++      +  R F ++P +      +    L+SY++LP  L +  + +R+E      GL
Sbjct: 96  IQD-----RHGRDFVIQPTSEEVVTDIARQELRSYKQLPRNLYQIQTKFRDERRPRF-GL 149

Query: 381 MRVRGFTQDDAHVF 394
           MR R F   DA+ F
Sbjct: 150 MRGREFIMKDAYSF 163


>gi|153836755|ref|ZP_01989422.1| prolyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
 gi|260900371|ref|ZP_05908766.1| proline--tRNA ligase [Vibrio parahaemolyticus AQ4037]
 gi|149749901|gb|EDM60646.1| prolyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
 gi|308108556|gb|EFO46096.1| proline--tRNA ligase [Vibrio parahaemolyticus AQ4037]
          Length = 571

 Score = 45.8 bits (107), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 38/163 (23%), Positives = 73/163 (44%), Gaps = 10/163 (6%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINT--PQVLDQHLWQQSGHWDSYRANMF 319
            SG+  W   G ++ + + + +R++I D+   + T  P V    LW+++G     R+   
Sbjct: 36  ASGLYTWLPTGLRVLRKVENIVRQEI-DNAGAVETLMPVVQPFELWEETG-----RSEKM 89

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHG 379
             +    T + +R F L P       ++  + + SY++LP+ L +  + +R+E      G
Sbjct: 90  GPELLRFTDRHVRPFVLSPTAEEVITSLVRNEVSSYKQLPLNLYQIQTKFRDERRPRF-G 148

Query: 380 LMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFE 421
           +MR R F   DA+ F   K  +      +H+     +   G E
Sbjct: 149 VMRAREFCMMDAYSFDIDKAGLEKSYQAMHDAYCKAFDRMGLE 191


>gi|291515305|emb|CBK64515.1| Uridine kinase [Alistipes shahii WAL 8301]
          Length = 556

 Score = 45.8 bits (107), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 43/185 (23%), Positives = 84/185 (45%), Gaps = 10/185 (5%)

Query: 18  PVHATGSDVAESISRSLAKKAVAVAINGKVCDLS----DPVREGSIEIITPEDPRSLAVI 73
           P+     +VAE ++  L    +A  +N ++ +LS     PV   +I  +       + V 
Sbjct: 19  PMGTPLLEVAERLTPGL-HPFLAAFVNNRIKELSYKIYAPV---TIRFVDITSFAGIRVY 74

Query: 74  RHSCAHIMAEAVQSIWPEVQVAI-GPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIAR 132
           + +   ++ +AV+ ++P   + I   + + GFY + D    F+ DE AQ+  +M+E+  R
Sbjct: 75  QRTAWFLLQKAVKDLYPGQTLHIRHSMGQSGFYCEIDGIDEFTPDEAAQLRDRMRELSVR 134

Query: 133 DSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTG 192
           + P  +Q +   + R  +  +    K+ +L++ P +    LY   +      G    STG
Sbjct: 135 NLPITRQRMLTTEVRARYAEEGFTDKIALLDTRP-RLYSQLYTLDDTAGYFYGSLAPSTG 193

Query: 193 QVKKF 197
            V  F
Sbjct: 194 YVTLF 198


>gi|255319660|ref|ZP_05360869.1| alanyl-tRNA synthetase [Acinetobacter radioresistens SK82]
 gi|262378543|ref|ZP_06071700.1| alanyl-tRNA synthetase [Acinetobacter radioresistens SH164]
 gi|255303277|gb|EET82485.1| alanyl-tRNA synthetase [Acinetobacter radioresistens SK82]
 gi|262299828|gb|EEY87740.1| alanyl-tRNA synthetase [Acinetobacter radioresistens SH164]
          Length = 897

 Score = 45.8 bits (107), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 37/155 (23%), Positives = 71/155 (45%), Gaps = 15/155 (9%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSS 116
           ++E     + R+     HS  H++  A++ I    VQ     +  D   +DF  +QP + 
Sbjct: 564 NVEATVKAELRAATARNHSATHLLHAALRQILGSHVQQKGSLVASDILRFDFANDQPVTF 623

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARE----LFESKKEAYKVEILE--SIPAKEN 170
           ++L QIE+ +   +  ++    + L  E A+     +   +K   +V +L   SI  ++N
Sbjct: 624 EQLQQIERLVNAEVIANTAVTTELLDIETAKTKGAMMLFGEKYGSEVRVLSMGSIIEEKN 683

Query: 171 VTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAG 205
            ++       +LC G HV+ TG +   FK+   +G
Sbjct: 684 FSV-------ELCGGIHVKRTGDI-GLFKITSESG 710


>gi|86160141|ref|YP_466926.1| cyclic nucleotide-binding domain-containing protein
           [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85776652|gb|ABC83489.1| cyclic nucleotide-binding domain (cNMP-BD) protein
           [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 714

 Score = 45.8 bits (107), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 42/178 (23%), Positives = 79/178 (44%), Gaps = 3/178 (1%)

Query: 22  TGSDVAESISRSLAKKAVAVAING-KVCDLSDPV-REGSIEIITPEDPRSLAVIRHSCAH 79
           TG+ V + +  +L    V   + G K   L+ PV  + ++  +T        V  HS   
Sbjct: 176 TGTRVRDLLPEALDGDLVVAGLLGQKPVSLATPVFTDTTVAPLTVSHWEGRQVYAHSLGL 235

Query: 80  IMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQ 139
           ++ EA   + P  +V +GP +        +      +   A++   M+ I+A D+PF  +
Sbjct: 236 VLLEAAHQVAPAARVRMGPSLGTRQLVVVEGADEDRAGLAARLAAGMERIVAADAPFRSE 295

Query: 140 YLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
           Y S ++A+  F  +  +    +L  +  +  V L   GE + L  GP + STG ++ +
Sbjct: 296 YWSTDEAQGWFLERGWSDAARLLR-VRRQATVRLVSCGEVYALSMGPLLPSTGALRGW 352


>gi|330834490|ref|YP_004409218.1| Ser-tRNA(Thr) hydrolase [Metallosphaera cuprina Ar-4]
 gi|329566629|gb|AEB94734.1| Ser-tRNA(Thr) hydrolase [Metallosphaera cuprina Ar-4]
          Length = 386

 Score = 45.8 bits (107), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 3/83 (3%)

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
           +LPLWLSPI   V  +T S  E   + +  LK   + ++ D  +E I  KIR   +  IP
Sbjct: 266 SLPLWLSPIHVRVLKLTES--EEVDKFSLSLKERGIRVQVDDLDEGIGKKIRRAGMDWIP 323

Query: 605 IIIICGDKEASERSIGIR-RFGS 626
            + I G++E   +++ ++ R GS
Sbjct: 324 YVAIVGERELQTKNLTVKVRDGS 346


>gi|319761647|ref|YP_004125584.1| prolyl-tRNA synthetase [Alicycliphilus denitrificans BC]
 gi|317116208|gb|ADU98696.1| prolyl-tRNA synthetase [Alicycliphilus denitrificans BC]
          Length = 581

 Score = 45.8 bits (107), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 31/134 (23%), Positives = 63/134 (47%), Gaps = 7/134 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           G+G+  +   G ++ + + + +R ++ +    E   P V    LWQ++G ++     +  
Sbjct: 36  GAGIYSYMPMGLRVIRKVEAIVREEMNRAGAVECTMPVVQPAELWQETGRFEKMGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           ++      +  R F ++P +      +    L+SY++LP  L +  + +R+E      GL
Sbjct: 96  IQD-----RHGRDFVIQPTSEEVVTDIARQELRSYKQLPRNLYQIQTKFRDERRPRF-GL 149

Query: 381 MRVRGFTQDDAHVF 394
           MR R F   DA+ F
Sbjct: 150 MRGREFIMKDAYSF 163


>gi|289522181|ref|ZP_06439035.1| phosphoribulokinase family protein [Anaerobaculum hydrogeniformans
           ATCC BAA-1850]
 gi|289504017|gb|EFD25181.1| phosphoribulokinase family protein [Anaerobaculum hydrogeniformans
           ATCC BAA-1850]
          Length = 548

 Score = 45.8 bits (107), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 41/176 (23%), Positives = 77/176 (43%), Gaps = 4/176 (2%)

Query: 23  GSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSCAHIM 81
           G DV  +  +      VA  +N  +  L   V + S IE +       + V R S + ++
Sbjct: 21  GQDVLVACGKGHESNIVAWRVNRYLRPLDWVVDDDSCIEFVDTSSFEGMEVYRRSLSFLL 80

Query: 82  AEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYL 141
             A  +   E  V I   I DG+Y + +   P +  +L  I++++  ++  D P  ++ +
Sbjct: 81  VLACMNALSE-DVFIRHSISDGYYCELES-GPVTEKKLDAIKRELDRLVNADIPIKREVI 138

Query: 142 SHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
           S +KA+ +F  +    K  +L    A + + +YR    +     P   STG +K +
Sbjct: 139 SGDKAKRIFTRQGNMDKANLLR-WAAVDPIEVYRSDNTYGYFYAPLAPSTGYMKTY 193


>gi|300023633|ref|YP_003756244.1| alanyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888]
 gi|299525454|gb|ADJ23923.1| alanyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888]
          Length = 897

 Score = 45.8 bits (107), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 33/146 (22%), Positives = 63/146 (43%), Gaps = 16/146 (10%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSS 116
           ++EI      R+     HS  H++ EA++ +        G ++  D   +DF   +P S+
Sbjct: 557 AVEIEVDHARRTATRANHSATHLLHEALRQVLGTHVAQKGSLVSPDRLRFDFSHTKPMSA 616

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKAR-----ELFESK--KEAYKVEILESIPAKE 169
           +E+  +E     ++  ++P + + ++ ++AR      LF  K   E   V +  + P   
Sbjct: 617 EEIKAVEDMANAVLLENTPVVTRLMALDEARASGAMALFGEKYGDEVRVVSMGSTRPGAN 676

Query: 170 NVTLYRQGEW-FDLCRGPHVRSTGQV 194
                    W  +LC G HV  TG +
Sbjct: 677 KA-------WSVELCGGTHVTRTGDI 695


>gi|229513024|ref|ZP_04402490.1| prolyl-tRNA synthetase [Vibrio cholerae TMA 21]
 gi|229349917|gb|EEO14871.1| prolyl-tRNA synthetase [Vibrio cholerae TMA 21]
          Length = 600

 Score = 45.8 bits (107), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 64/135 (47%), Gaps = 9/135 (6%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINT--PQVLDQHLWQQSGHWDSYRANMF 319
            SG+  W   G ++ + + + +R++I D+   I T  P V    LW+++G     R+   
Sbjct: 36  ASGLYTWLPTGLRVLRKVENIVRQEI-DNAGAIETLMPVVQPFELWEETG-----RSEKM 89

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHG 379
             +    T +  R F L P       A+  + + SY++LP+ L +  + +R+E      G
Sbjct: 90  GPELLRFTDRHERPFVLSPTAEEVITALVRNEVSSYKQLPLNLYQIQTKFRDERRPRF-G 148

Query: 380 LMRVRGFTQDDAHVF 394
           +MR R F   DA+ F
Sbjct: 149 VMRAREFCMMDAYSF 163


>gi|229015418|ref|ZP_04172422.1| Seryl-tRNA synthetase [Bacillus cereus AH1273]
 gi|229021624|ref|ZP_04178212.1| Seryl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228739670|gb|EEL90078.1| Seryl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228745876|gb|EEL95874.1| Seryl-tRNA synthetase [Bacillus cereus AH1273]
          Length = 424

 Score = 45.8 bits (107), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 36/153 (23%), Positives = 66/153 (43%), Gaps = 13/153 (8%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDD--YEEINTPQVLDQHLWQQSGHWDSYRANMF 319
           GS  +F+   G ++ + LIS+M     D+  YEE+  P ++++     +G    +  + F
Sbjct: 160 GSRFVFYKGAGARLERALISFMLDLHTDEHGYEEVLPPYMVNRASMTGTGQLPKFEEDAF 219

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS--- 376
            ++  D        + L P        +    + S  +LP+R A F S +R+E   +   
Sbjct: 220 RIESED--------YFLIPTAEVPVTNMHRDEILSKEQLPIRYAAFSSCFRSEAGSAGRD 271

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
             GL+R   F + +   F   E  + E  K+ N
Sbjct: 272 TRGLIRQHQFNKVELVKFVKPEDSYEELEKLTN 304


>gi|241958042|ref|XP_002421740.1| prolyl-tRNA synthetase, cytoplasmic, putative [Candida dubliniensis
           CD36]
 gi|223645085|emb|CAX39680.1| prolyl-tRNA synthetase, cytoplasmic, putative [Candida dubliniensis
           CD36]
          Length = 567

 Score = 45.8 bits (107), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 80/173 (46%), Gaps = 22/173 (12%)

Query: 255 LFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDS 313
           L +I    +G++ W + G  I   +   +R+++ + ++EEI+   +  + LW+ +  WD 
Sbjct: 39  LGYITYPRAGLVNWSKMGLLIQNKINQIIRQRMDEINFEEISLSLISHKDLWKLTNRWD- 97

Query: 314 YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE- 372
            +  +F  K   D    + T   +  N      V    L+SY+  PV L +    +RNE 
Sbjct: 98  -QEEIF--KLVGDEYLLVPTAEEEITN-----YVKKQFLESYKNFPVGLYQINPKFRNEK 149

Query: 373 -PSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS----IYKDFGF 420
            P G   GL+R + F   DA+ F   E   +E +K +  ++     I++D G 
Sbjct: 150 RPRG---GLLRGKEFLMKDAYSFDLNE---SEAMKTYEKVVGAYHKIFQDLGI 196


>gi|157564|gb|AAA28594.1| transfer RNA-Glu-Pro aminoacyl synthetase [Drosophila melanogaster]
 gi|1871360|gb|AAC47469.1| glutamyl-prolyl-tRNA synthetase [Drosophila melanogaster]
          Length = 1714

 Score = 45.8 bits (107), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 70/311 (22%), Positives = 116/311 (37%), Gaps = 63/311 (20%)

Query: 334  FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYR---NEPSGSLHGLMRVRGFTQDD 390
             A++P +       +   ++SYR+LP+RL ++ +V R    +P+      +R R F   +
Sbjct: 1316 IAVRPTSETVMYPAYAKWVQSYRDLPIRLNQWNNVVRWEFKQPT----PFLRTREFLWQE 1371

Query: 391  AHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMK 449
             H  F  KE+   E L I +L   +Y       ++    T  EK  G D           
Sbjct: 1372 GHTAFADKEEAAKEVLDILDLYALVYTHLLAIPVVKGRKTEKEKFAGGD----------- 1420

Query: 450  GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNA 508
                                     Y    E  +  A GR  Q  T   +  N    F  
Sbjct: 1421 -------------------------YTTTVEAFI-SASGRAIQGATSHHLGQNFSKMFEI 1454

Query: 509  FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVT----TI 560
             Y +    +     +++  +G   R IG+MI     N  L L P    IQAIV     T+
Sbjct: 1455 VYEDPEKTQ-QKKYVYQNSWGITTRTIGVMIMVHADNQGLVLPPHVACIQAIVVPCGITV 1513

Query: 561  TSSAVEYAQ------EIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKE 613
             +   E AQ       +   L    +  E D+R N +  +K     +K +P+ +  G K+
Sbjct: 1514 NTKDDERAQLLDACKALEKRLVGGGVRCEGDYRDNYSPGWKFNHWELKGVPLRLEVGPKD 1573

Query: 614  -ASERSIGIRR 623
              +++ + +RR
Sbjct: 1574 LKAQQLVAVRR 1584


>gi|291299271|ref|YP_003510549.1| prolyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728]
 gi|290568491|gb|ADD41456.1| prolyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728]
          Length = 562

 Score = 45.8 bits (107), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 46/194 (23%), Positives = 81/194 (41%), Gaps = 18/194 (9%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEIN 295
           F  E+E   H++L R   +  +A   +G         ++   +++ +R ++ +   +E  
Sbjct: 14  FPAEAEAPSHQRLVRAGFIRQLA---AGHYSLLPLAIRVRAKIMAVIREELDRIGAQEFL 70

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH---GL 352
            P +    +W  SG WD   + MF        +KD +   L       H  +F      L
Sbjct: 71  LPAMHPAEIWHASGRWDVMGSEMF-------RLKDRKGAQLALGMT--HEEIFTSIATEL 121

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH-NLI 411
            SY++LP    +F + +R+EP     GL+RVR FT  D++ F       +     H    
Sbjct: 122 NSYKQLPQIWYQFQTKFRDEPRPK-GGLLRVREFTMKDSYSFDLDAAGLDAAFDKHRGAY 180

Query: 412 ISIYKDFGFEKIMV 425
           + I++  G   I V
Sbjct: 181 LRIFERLGIPAIPV 194


>gi|254455521|ref|ZP_05068950.1| alanyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211]
 gi|207082523|gb|EDZ59949.1| alanyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211]
          Length = 888

 Score = 45.8 bits (107), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 43/164 (26%), Positives = 81/164 (49%), Gaps = 23/164 (14%)

Query: 42  AINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE 101
            ING +  L D V E  I +   +D R+     HS  H++ E+++ +  +     G ++E
Sbjct: 537 VINGSI-QLKDNV-ELKINVERRDDTRAY----HSATHLLHESLRRVLGKHVTQKGSLVE 590

Query: 102 DG-FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESKKE 155
                +DF   +P  ++E+ +IE  +  ++++ S    + ++ ++A E     LF  +K 
Sbjct: 591 PSRLRFDFSHMKPIQTEEIDKIEGFVNNMVSKKSDVKTRLMTPDEAVENGALALF-GEKY 649

Query: 156 AYKVEILESIPAKENVTLYRQGEWF--DLCRGPHVRSTGQVKKF 197
             +V +L S+   +       G +F  +LC G HVR+TG + KF
Sbjct: 650 GEEVRVL-SMGDDD-------GSYFSTELCGGTHVRNTGDIGKF 685


>gi|153216557|ref|ZP_01950520.1| prolyl-tRNA synthetase [Vibrio cholerae 1587]
 gi|153830554|ref|ZP_01983221.1| prolyl-tRNA synthetase [Vibrio cholerae 623-39]
 gi|124114232|gb|EAY33052.1| prolyl-tRNA synthetase [Vibrio cholerae 1587]
 gi|148873952|gb|EDL72087.1| prolyl-tRNA synthetase [Vibrio cholerae 623-39]
          Length = 571

 Score = 45.8 bits (107), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 64/135 (47%), Gaps = 9/135 (6%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINT--PQVLDQHLWQQSGHWDSYRANMF 319
            SG+  W   G ++ + + + +R++I D+   I T  P V    LW+++G     R+   
Sbjct: 36  ASGLYTWLPTGLRVLRKVENIVRQEI-DNAGAIETLMPVVQPFELWEETG-----RSEKM 89

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHG 379
             +    T +  R F L P       A+  + + SY++LP+ L +  + +R+E      G
Sbjct: 90  GPELLRFTDRHERPFVLSPTAEEVITALVRNEVSSYKQLPLNLYQIQTKFRDERRPRF-G 148

Query: 380 LMRVRGFTQDDAHVF 394
           +MR R F   DA+ F
Sbjct: 149 VMRAREFCMMDAYSF 163


>gi|159901383|ref|YP_001547630.1| prolyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
 gi|159894422|gb|ABX07502.1| prolyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
          Length = 570

 Score = 45.8 bits (107), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 11/134 (8%)

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
           D +E+  P V    LW+++G ++     +   K  D   KD+    L   +      +  
Sbjct: 65  DGQELLMPVVTSADLWRETGRYEGVTEELLRFK--DRNNKDM---VLNMTHEEVVTDIMR 119

Query: 350 HGLKSYRELPVRLAEFGSVYRNE--PSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLK 406
             +KSYR++PV + +  + YR+E  P G   G++R+R FT  DA+ F  T E +     +
Sbjct: 120 RYIKSYRQMPVMVYQIQTKYRDEARPRG---GIIRLREFTMKDAYSFHATIEDLDQYYEQ 176

Query: 407 IHNLIISIYKDFGF 420
           + N    IY+  G 
Sbjct: 177 VLNAYKRIYQRCGL 190


>gi|253568239|ref|ZP_04845650.1| prolyl-tRNA synthetase [Bacteroides sp. 1_1_6]
 gi|251842312|gb|EES70392.1| prolyl-tRNA synthetase [Bacteroides sp. 1_1_6]
          Length = 497

 Score = 45.8 bits (107), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 62/300 (20%), Positives = 128/300 (42%), Gaps = 56/300 (18%)

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECL 405
            + + ++SYR+LP+   ++ +V+R E    L   +R   F   + H    T+++   E +
Sbjct: 134 TYKNWIQSYRDLPILCNQWANVFRWEMRTRL--FLRTAEFLWQEGHTAHATRKEAEEEAI 191

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
           ++ N    +Y +F  EK M                   A  ++KGV      S+ +R   
Sbjct: 192 RMLN----VYGEFA-EKYM-------------------AVPVVKGV-----KSANERF-- 220

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIH 524
                 GA      E +++D  G+  Q GT   +  N    F+  +VN  ++  +   + 
Sbjct: 221 -----AGALDTYTIEAMMQD--GKALQSGTSHFLGQNFAKAFDVQFVNKENKMEY---VW 270

Query: 525 RAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTITSSAVEYAQEIANL------ 574
              +G   R +G +I     +    LP  L+PIQ ++  I  +  +  Q  A +      
Sbjct: 271 ATSWGVSTRLMGALIMTHSDDNGLVLPPHLAPIQVVIVPIYKNDEQLKQIDAKVEGIVAK 330

Query: 575 LKSHHLSIETD-FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
           LK+  +S++ D   N+   +K  ++ +K +P+ ++ G ++    ++ + R  +   + V+
Sbjct: 331 LKALGISVKYDNADNKRPGFKFADYELKGVPVRLVMGGRDLENNTMEVMRRDTLEKETVT 390


>gi|153824641|ref|ZP_01977308.1| prolyl-tRNA synthetase [Vibrio cholerae MZO-2]
 gi|149741859|gb|EDM55888.1| prolyl-tRNA synthetase [Vibrio cholerae MZO-2]
          Length = 571

 Score = 45.8 bits (107), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 64/135 (47%), Gaps = 9/135 (6%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINT--PQVLDQHLWQQSGHWDSYRANMF 319
            SG+  W   G ++ + + + +R++I D+   I T  P V    LW+++G     R+   
Sbjct: 36  ASGLYTWLPTGLRVLRKVENIVRQEI-DNAGAIETLMPVVQPFELWEETG-----RSEKM 89

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHG 379
             +    T +  R F L P       A+  + + SY++LP+ L +  + +R+E      G
Sbjct: 90  GPELLRFTDRHERPFVLSPTAEEVITALVRNEVSSYKQLPLNLYQIQTKFRDERRPRF-G 148

Query: 380 LMRVRGFTQDDAHVF 394
           +MR R F   DA+ F
Sbjct: 149 VMRAREFCMMDAYSF 163


>gi|15605118|ref|NP_219903.1| prolyl-tRNA synthetase [Chlamydia trachomatis D/UW-3/CX]
 gi|6686306|sp|P36431|SYP_CHLTR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|3328819|gb|AAC67990.1| Prolyl tRNA Synthetase [Chlamydia trachomatis D/UW-3/CX]
 gi|297748523|gb|ADI51069.1| Prolyl-tRNA synthetase [Chlamydia trachomatis D-EC]
 gi|297749403|gb|ADI52081.1| Prolyl-tRNA synthetase [Chlamydia trachomatis D-LC]
          Length = 581

 Score = 45.8 bits (107), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 38/173 (21%), Positives = 75/173 (43%), Gaps = 14/173 (8%)

Query: 263 SGVIFWHRKG----WKIFQTLISYMRRKIKDDY-----EEINTPQVLDQHLWQQSGHWDS 313
           +G +F   KG      +FQ +I  M   I+++      +E+  P +    LW+++G W +
Sbjct: 29  AGYLFKTSKGIYSYTPLFQRVILKMTEIIREELNAIGGQEVCLPLLQPAELWEKTGRWKA 88

Query: 314 YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP 373
           + +        D   ++ +   L P +           L    +LP+ L + G+ +R+E 
Sbjct: 89  FLSEKLLYVLKD---RENKAMCLAPTHEEVVSEFVAQWLTGREQLPIHLYQIGTKFRDEI 145

Query: 374 SGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
                GLMR + F  +D++ F  + EQM  +  K+      I+     + ++V
Sbjct: 146 RPRF-GLMRAKEFLMEDSYTFSDSPEQMEEQYAKLRLAYQRIFDRLNLKYVIV 197


>gi|296436840|gb|ADH19010.1| prolyl-tRNA synthetase [Chlamydia trachomatis G/11222]
          Length = 581

 Score = 45.8 bits (107), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 38/173 (21%), Positives = 75/173 (43%), Gaps = 14/173 (8%)

Query: 263 SGVIFWHRKG----WKIFQTLISYMRRKIKDDY-----EEINTPQVLDQHLWQQSGHWDS 313
           +G +F   KG      +FQ +I  M   I+++      +E+  P +    LW+++G W +
Sbjct: 29  AGYLFKTSKGIYSYTPLFQRVILKMTEIIREELNAIGGQEVCLPLLQPAELWEKTGRWKA 88

Query: 314 YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP 373
           + +        D   ++ +   L P +           L    +LP+ L + G+ +R+E 
Sbjct: 89  FLSEKLLYVLKD---RENKAMCLAPTHEEVVSEFVAQWLTGREQLPIHLYQIGTKFRDEI 145

Query: 374 SGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
                GLMR + F  +D++ F  + EQM  +  K+      I+     + ++V
Sbjct: 146 RPRF-GLMRAKEFLMEDSYTFSDSPEQMEEQYAKLRLAYQRIFDRLNLKYVIV 197


>gi|296435914|gb|ADH18088.1| prolyl-tRNA synthetase [Chlamydia trachomatis G/9768]
 gi|296437774|gb|ADH19935.1| prolyl-tRNA synthetase [Chlamydia trachomatis G/11074]
 gi|297140274|gb|ADH97032.1| prolyl-tRNA synthetase [Chlamydia trachomatis G/9301]
          Length = 581

 Score = 45.8 bits (107), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 38/173 (21%), Positives = 75/173 (43%), Gaps = 14/173 (8%)

Query: 263 SGVIFWHRKG----WKIFQTLISYMRRKIKDDY-----EEINTPQVLDQHLWQQSGHWDS 313
           +G +F   KG      +FQ +I  M   I+++      +E+  P +    LW+++G W +
Sbjct: 29  AGYLFKTSKGIYSYTPLFQRVILKMTEIIREELNAIGGQEVCLPLLQPAELWEKTGRWKA 88

Query: 314 YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP 373
           + +        D   ++ +   L P +           L    +LP+ L + G+ +R+E 
Sbjct: 89  FLSEKLLYVLKD---RENKAMCLAPTHEEVVSEFVAQWLTGREQLPIHLYQIGTKFRDEI 145

Query: 374 SGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
                GLMR + F  +D++ F  + EQM  +  K+      I+     + ++V
Sbjct: 146 RPRF-GLMRAKEFLMEDSYTFSDSPEQMEEQYAKLRLAYQRIFDRLNLKYVIV 197


>gi|237802818|ref|YP_002888012.1| prolyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT]
 gi|237804740|ref|YP_002888894.1| prolyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|231273040|emb|CAX09953.1| prolyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|231274052|emb|CAX10846.1| prolyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT]
          Length = 581

 Score = 45.8 bits (107), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 38/173 (21%), Positives = 75/173 (43%), Gaps = 14/173 (8%)

Query: 263 SGVIFWHRKG----WKIFQTLISYMRRKIKDDY-----EEINTPQVLDQHLWQQSGHWDS 313
           +G +F   KG      +FQ +I  M   I+++      +E+  P +    LW+++G W +
Sbjct: 29  AGYLFKTSKGIYSYTPLFQRVILKMTEIIREELNAIGGQEVCLPLLQPAELWEKTGRWKA 88

Query: 314 YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP 373
           + +        D   ++ +   L P +           L    +LP+ L + G+ +R+E 
Sbjct: 89  FLSEKLLYVLKD---RENKAMCLAPTHEEVVSEFVAQWLTGREQLPIHLYQIGTKFRDEI 145

Query: 374 SGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
                GLMR + F  +D++ F  + EQM  +  K+      I+     + ++V
Sbjct: 146 RPRF-GLMRAKEFLMEDSYTFSDSPEQMEEQYAKLRLAYQRIFDRLNLKYVIV 197


>gi|170743900|ref|YP_001772555.1| alanyl-tRNA synthetase [Methylobacterium sp. 4-46]
 gi|205830146|sp|B0UGC4|SYA_METS4 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|168198174|gb|ACA20121.1| alanyl-tRNA synthetase [Methylobacterium sp. 4-46]
          Length = 886

 Score = 45.8 bits (107), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 33/133 (24%), Positives = 65/133 (48%), Gaps = 12/133 (9%)

Query: 71  AVIR--HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQ 127
           A IR  HS  H++ EA++ +  +     G ++  +   +DF   +P + DE+A +E+   
Sbjct: 558 AAIRAHHSATHLLHEALRQVLGDHVAQKGSLVSPERLRFDFSHPKPMNDDEVAAVEEMAN 617

Query: 128 EIIARDSPFLKQYLSHEK-----ARELFESKKEAYKVEI-LESIPAKENVTLYRQGEWFD 181
            ++ ++ P + + ++ +      AR LF    E Y  E+ + S+   +     R+    +
Sbjct: 618 RVLLQNGPVVTKLMAVDDAIATGARALF---GEKYGDEVRVVSMGEDQGGDGRRRTFSVE 674

Query: 182 LCRGPHVRSTGQV 194
           LC G HV  TG++
Sbjct: 675 LCGGTHVGRTGEI 687


>gi|210615765|ref|ZP_03290746.1| hypothetical protein CLONEX_02964 [Clostridium nexile DSM 1787]
 gi|210150101|gb|EEA81110.1| hypothetical protein CLONEX_02964 [Clostridium nexile DSM 1787]
          Length = 885

 Score = 45.4 bits (106), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 37/155 (23%), Positives = 72/155 (46%), Gaps = 21/155 (13%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSS 116
           S+ +   E  R+     HS  H++ +A++++    V+     +  D   +DF      + 
Sbjct: 555 SVTLEVAEKERANTCKNHSATHLLQKALKTVLGSHVEQKGSLVTPDRLRFDFAHFSAMTP 614

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKAR-----ELFESKKEAYKVEILESIPAKENV 171
           +EL ++E  +   IA++ P + + ++ E+A+      LF  K E             E+V
Sbjct: 615 EELEKVENIVNTEIAKNVPVVTEVMNIEQAKATGAMALFGEKYE-------------EDV 661

Query: 172 TLYRQGEWF-DLCRGPHVRSTGQVKKFFKLMKVAG 205
            +   G++  +LC G HV +TG +   FK++  AG
Sbjct: 662 RVVSMGDFSKELCGGTHVSNTGNITT-FKIVSEAG 695


>gi|220925350|ref|YP_002500652.1| alanyl-tRNA synthetase [Methylobacterium nodulans ORS 2060]
 gi|219949957|gb|ACL60349.1| alanyl-tRNA synthetase [Methylobacterium nodulans ORS 2060]
          Length = 886

 Score = 45.4 bits (106), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 33/144 (22%), Positives = 67/144 (46%), Gaps = 10/144 (6%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSS 116
           +IE+    + R+     HS  H++ EA++ +  +     G ++  +   +DF   +P + 
Sbjct: 547 AIELQVDHERRAAIRAHHSATHLLHEALRQVLGDHVAQKGSLVSPERLRFDFSHPKPMND 606

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEK-----ARELFESKKEAYKVEILESIPAKENV 171
           DE+A +E     ++ ++ P + + ++ +      AR LF    E Y  E+      +E+ 
Sbjct: 607 DEVAAVEDMANRVLLQNGPVVTKLMAVDDAIATGARALF---GEKYGDEVRVVSMGEESS 663

Query: 172 TLYRQGEW-FDLCRGPHVRSTGQV 194
              R   +  +LC G HV  TG++
Sbjct: 664 ADGRPKAFSVELCGGTHVARTGEI 687


>gi|154253644|ref|YP_001414468.1| prolyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1]
 gi|171769681|sp|A7HY28|SYP_PARL1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|154157594|gb|ABS64811.1| prolyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1]
          Length = 439

 Score = 45.4 bits (106), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 38/156 (24%), Positives = 65/156 (41%), Gaps = 10/156 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQ 298
           E++   HR + R      + +  +G+  W   G  + + +   +R + K     E+  P 
Sbjct: 17  EAQIASHRLMLRAG---MVRQTAAGIYAWLPLGLAVLRKIEGIVRDEQKRAGAIELLMPT 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW+QSG +D+Y   M  +       +  R     P N      +F   ++SYR+L
Sbjct: 74  LQSADLWRQSGRYDAYGPEMLRI-----VDRHERDMLYGPTNEEMITDIFRGAVRSYRDL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           P  L      +R+E      G+MR R F   D + F
Sbjct: 129 PRNLFHIQWKFRDEIRPRF-GVMRGREFLMKDGYSF 163


>gi|154309169|ref|XP_001553919.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
 gi|150852522|gb|EDN27714.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
          Length = 588

 Score = 45.4 bits (106), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 79/368 (21%), Positives = 152/368 (41%), Gaps = 55/368 (14%)

Query: 275 IFQTLISYMRRKIKD-DYEEINTPQVLD-QHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           I+  + ++ + KI+  D EE + P  L  + L ++  H + +   +  V  A D  KDL 
Sbjct: 97  IWNQIRNWFQAKIETLDVEEASFPMFLSSKSLEKEKDHVEGFAPELAWVTKAGD--KDLE 154

Query: 333 T-FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
              A++P +       ++  ++S+R+LP+RL ++ SV R E   +    +R R F   + 
Sbjct: 155 VPVAVRPTSEAVMYPYYSKWIRSHRDLPLRLNQWNSVVRWEAKQTTP-FLRAREFLWQEG 213

Query: 392 HVFCTKEQMFN-ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKG 450
           H     E +   E L+I      +Y++     ++    T  EK  G           ++G
Sbjct: 214 HTAHLTEALAGEEVLQILEFYAGVYEELLAVPVVRGRKTEKEKFAGGYYT-----TTVEG 268

Query: 451 VLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFY 510
            + +  N    +  T   LG+   +   F+  ++D   ++                    
Sbjct: 269 YIPS--NGRGIQGATSHCLGQN--FSKMFDITVEDPTPKN-------------------- 304

Query: 511 VNSHSEKCHPVMIHRAVFGSIERFIGIMI---ENFKG-NLPLWLSPIQAIV--------T 558
                EK   + + +  +G   R IG+M+    + KG  LP  ++ +QAI+        T
Sbjct: 305 ----GEKAGHLHVWQNSWGLSTRVIGVMVMIHGDDKGLVLPPRIAKLQAIIVPVGITNKT 360

Query: 559 TITSSAVEY--AQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEAS 615
           T    A  Y   Q I + LK   +  + D R+  T  +K  +  +K +P+ +  G ++A+
Sbjct: 361 TPEEKAKRYDELQNIKDTLKKSGVRADYDIRDGYTPAWKFNDWELKGVPLRLEYGPRDAA 420

Query: 616 ERSIGIRR 623
           +  +   R
Sbjct: 421 QGVVSYAR 428


>gi|160900913|ref|YP_001566495.1| prolyl-tRNA synthetase [Delftia acidovorans SPH-1]
 gi|226699138|sp|A9BP65|SYP_DELAS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|160366497|gb|ABX38110.1| prolyl-tRNA synthetase [Delftia acidovorans SPH-1]
          Length = 581

 Score = 45.4 bits (106), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 30/134 (22%), Positives = 63/134 (47%), Gaps = 7/134 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           G+G+  +   G ++ + + + +R ++ +    E+  P V    +W+++G ++     +  
Sbjct: 36  GAGIYNYMPMGLRVIRKVEAIVREEMNRAGAVEVTMPVVQPAEMWEETGRFEKMGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +K      +  R F ++P +      +    LKSY++LP    +  + +R+E      GL
Sbjct: 96  IKD-----RHGRDFVIQPTSEEVVTDIARQELKSYKQLPKNFYQIQTKFRDERRPRF-GL 149

Query: 381 MRVRGFTQDDAHVF 394
           MR R F   DA+ F
Sbjct: 150 MRGREFIMKDAYSF 163


>gi|76789124|ref|YP_328210.1| prolyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13]
 gi|114152182|sp|Q3KLW0|SYP_CHLTA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|76167654|gb|AAX50662.1| prolyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13]
          Length = 581

 Score = 45.4 bits (106), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 38/173 (21%), Positives = 75/173 (43%), Gaps = 14/173 (8%)

Query: 263 SGVIFWHRKG----WKIFQTLISYMRRKIKDDY-----EEINTPQVLDQHLWQQSGHWDS 313
           +G +F   KG      +FQ +I  M   I+++      +E+  P +    LW+++G W +
Sbjct: 29  AGYLFKTSKGIYSYTPLFQRVILKMTEIIREELNAIGGQEVCLPLLQPAELWEKTGRWKA 88

Query: 314 YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP 373
           + +        D   ++ +   L P +           L    +LP+ L + G+ +R+E 
Sbjct: 89  FLSEKLLYVLKD---RENKAMCLAPTHEEVVSEFVAQWLTGREQLPIHLYQIGTKFRDEI 145

Query: 374 SGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
                GLMR + F  +D++ F  + EQM  +  K+      I+     + ++V
Sbjct: 146 RPRF-GLMRAKEFLMEDSYTFSDSPEQMEEQYAKLRLAYQRIFDRLNLKYVIV 197


>gi|154248383|ref|YP_001419341.1| prolyl-tRNA synthetase [Xanthobacter autotrophicus Py2]
 gi|226701431|sp|A7INT8|SYP_XANP2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|154162468|gb|ABS69684.1| prolyl-tRNA synthetase [Xanthobacter autotrophicus Py2]
          Length = 440

 Score = 45.4 bits (106), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 38/157 (24%), Positives = 67/157 (42%), Gaps = 10/157 (6%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTP 297
           +E+E   HR + R      I ++ +G+  W   G ++   + + +R  + +    E+  P
Sbjct: 16  KEAEIVSHRLMLRAG---MIRQESAGIYAWLPFGLRVLNKVCNIIREEQNRSGAIEMLMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW++SG +D Y   M  +K   +     R     P N      +    +KSY+ 
Sbjct: 73  TIQSADLWRESGRYDDYGKEMLRIKDRHE-----REMLFGPTNEEMITEIVRAYVKSYKA 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           LP+ L      +R+E      G+ R R F   DA+ F
Sbjct: 128 LPLNLYHIQWKFRDEVRPRF-GVYRSREFLMKDAYSF 163


>gi|89344805|gb|ABD69008.1| prolyl-tRNA synthetase [Rhodoferax ferrireducens T118]
          Length = 600

 Score = 45.4 bits (106), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 33/134 (24%), Positives = 63/134 (47%), Gaps = 7/134 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           G+G+      G ++ + +   +R ++ +    E+  P V    LWQ++G ++S    +  
Sbjct: 56  GAGIYSLMPMGLRVVRKVEQIVREEMNRAGAVELVMPVVQPAELWQETGRFESNGPELLR 115

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +K      +  R F ++P +      +    +KSY++LP  L +  + +R+E      GL
Sbjct: 116 IKD-----RHGRDFVVQPTSEEVVTDIARQEIKSYKQLPKNLYQIQTKFRDERRPRF-GL 169

Query: 381 MRVRGFTQDDAHVF 394
           MR R F   DA+ F
Sbjct: 170 MRGREFIMKDAYSF 183


>gi|119613716|gb|EAW93310.1| glutamyl-prolyl-tRNA synthetase, isoform CRA_b [Homo sapiens]
          Length = 1522

 Score = 45.4 bits (106), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 68/307 (22%), Positives = 118/307 (38%), Gaps = 55/307 (17%)

Query: 334  FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH- 392
             A++P +       +   ++S+R+LP++L ++ +V R E        +R R F   + H 
Sbjct: 1126 IAIRPTSETVMYPAYAKWVQSHRDLPIKLNQWCNVVRWEFKHP-QPFLRTREFLWQEGHS 1184

Query: 393  VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
             F T E+   E L+I +L   +Y++     ++    T  EK  G D             +
Sbjct: 1185 AFATMEEAAEEVLQILDLYAQVYEELLAIPVVKGRKTEKEKFAGGD---------YTTTI 1235

Query: 453  DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
            +   ++S   I  G     G  +   FE + +D                +P      Y N
Sbjct: 1236 EAFISASGRAIQGGTSHHLGQNFSKMFEIVFEDP--------------KIPGEKQFAYQN 1281

Query: 513  SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTT------ITSSAVE 566
            S              +G   R IG+M      N+ L L P  A V        IT++  E
Sbjct: 1282 S--------------WGLTTRTIGVMTMVHGDNMGLVLPPRVACVQVVIIPCGITNALSE 1327

Query: 567  YAQE--IANL------LKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKE-ASE 616
              +E  IA        L S ++ +  D R N +  +K     +K +PI +  G ++  S 
Sbjct: 1328 EDKEALIAKCNDYRRRLLSVNIRVRADLRDNYSPGWKFNHWELKGVPIRLEVGPRDMKSC 1387

Query: 617  RSIGIRR 623
            + + +RR
Sbjct: 1388 QFVAVRR 1394


>gi|88607771|ref|YP_505615.1| alanyl-tRNA synthetase [Anaplasma phagocytophilum HZ]
 gi|123494530|sp|Q2GJ36|SYA_ANAPZ RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|88598834|gb|ABD44304.1| alanyl-tRNA synthetase [Anaplasma phagocytophilum HZ]
          Length = 876

 Score = 45.4 bits (106), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 31/140 (22%), Positives = 58/140 (41%), Gaps = 8/140 (5%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSD 117
           +E +  +  R      HS  HI+   ++++  E +Q     +  D   +DF    P + +
Sbjct: 552 VEAVVDKQRREKLRANHSATHILQSVLRTLIGEGIQQKGSLVAADKLRFDFSHALPLTKE 611

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +L  +E ++   I  + P +  + S E A        +   + +       +NV +   G
Sbjct: 612 QLRTVEMEVNRQIMANQPVIIDHCSLEDA-------VQEGAIALFGEKYNDQNVRVVSMG 664

Query: 178 EWFDLCRGPHVRSTGQVKKF 197
              +LC G HVR TG +  F
Sbjct: 665 SSKELCGGTHVRFTGDIGAF 684


>gi|255311199|ref|ZP_05353769.1| prolyl-tRNA synthetase [Chlamydia trachomatis 6276]
 gi|255317500|ref|ZP_05358746.1| prolyl-tRNA synthetase [Chlamydia trachomatis 6276s]
          Length = 581

 Score = 45.4 bits (106), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 38/173 (21%), Positives = 75/173 (43%), Gaps = 14/173 (8%)

Query: 263 SGVIFWHRKG----WKIFQTLISYMRRKIKDDY-----EEINTPQVLDQHLWQQSGHWDS 313
           +G +F   KG      +FQ +I  M   I+++      +E+  P +    LW+++G W +
Sbjct: 29  AGYLFKTSKGIYSYTPLFQRVILKMTEIIREELNAIGGQEVCLPLLQPAELWEKTGRWKA 88

Query: 314 YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP 373
           + +        D   ++ +   L P +           L    +LP+ L + G+ +R+E 
Sbjct: 89  FLSEKLLYVLKD---RENKAMCLAPTHEEVVSEFVAQWLTGREQLPIHLYQIGTKFRDEI 145

Query: 374 SGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
                GLMR + F  +D++ F  + EQM  +  K+      I+     + ++V
Sbjct: 146 RPRF-GLMRAKEFLMEDSYTFSDSPEQMEEQYAKLRLAYQRIFDRLNLKYVIV 197


>gi|254463517|ref|ZP_05076933.1| prolyl-tRNA synthetase [Rhodobacterales bacterium HTCC2083]
 gi|206680106|gb|EDZ44593.1| prolyl-tRNA synthetase [Rhodobacteraceae bacterium HTCC2083]
          Length = 445

 Score = 45.4 bits (106), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 41/183 (22%), Positives = 78/183 (42%), Gaps = 11/183 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  +G+  W   G+K+ + + + +   + +  +  +  P +    LW++SG +D+Y  
Sbjct: 32  IKQSSAGIYSWLPMGFKVLRKIENIVHEEQQRAGHIPMLMPTLQSADLWRKSGRYDAYGP 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  +K   D     R     P N      +  + + SY+ LP+ L      +R+E    
Sbjct: 92  EMLRIKDRHD-----REMLYGPTNEELITDMVANFVGSYKSLPLTLYHVQWKFRDEVRPR 146

Query: 377 LHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
             G+MR R F   D + F  TKE   +   +     +  Y+  G + I ++  + P   +
Sbjct: 147 F-GVMRGREFLMKDGYNFDLTKEDALHAYNRHLVTYLRTYERMGLQAIPMRADSGP---I 202

Query: 436 GSD 438
           G D
Sbjct: 203 GGD 205


>gi|188586395|ref|YP_001917940.1| alanyl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|205830160|sp|B2A5J7|SYA_NATTJ RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|179351082|gb|ACB85352.1| alanyl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 878

 Score = 45.4 bits (106), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 60/129 (46%), Gaps = 19/129 (14%)

Query: 75  HSCAHIMAEAVQSI-WPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++  A++ +    V+ A   +  D   +DF    P S DE+ QIE ++ ++I  +
Sbjct: 564 HSATHMLHYALKKVVGAHVEQAGSLVAPDRLRFDFTHFAPLSEDEIKQIELEVNKLIREN 623

Query: 134 SPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           S         E+A+E     LFE K E  +V ++E  PA E            LC G H 
Sbjct: 624 SRVRVINTDLEEAKELGAVALFEDKYEQ-EVRVIEIGPAVE------------LCGGTHA 670

Query: 189 RSTGQVKKF 197
            +TG++  F
Sbjct: 671 TATGELGLF 679


>gi|162289255|ref|YP_522539.2| prolyl-tRNA synthetase [Rhodoferax ferrireducens T118]
 gi|114152240|sp|Q21YZ5|SYP_RHOFD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
          Length = 580

 Score = 45.4 bits (106), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 33/134 (24%), Positives = 63/134 (47%), Gaps = 7/134 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           G+G+      G ++ + +   +R ++ +    E+  P V    LWQ++G ++S    +  
Sbjct: 36  GAGIYSLMPMGLRVVRKVEQIVREEMNRAGAVELVMPVVQPAELWQETGRFESNGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +K      +  R F ++P +      +    +KSY++LP  L +  + +R+E      GL
Sbjct: 96  IKD-----RHGRDFVVQPTSEEVVTDIARQEIKSYKQLPKNLYQIQTKFRDERRPRF-GL 149

Query: 381 MRVRGFTQDDAHVF 394
           MR R F   DA+ F
Sbjct: 150 MRGREFIMKDAYSF 163


>gi|325266259|ref|ZP_08132938.1| proline--tRNA ligase [Kingella denitrificans ATCC 33394]
 gi|324982221|gb|EGC17854.1| proline--tRNA ligase [Kingella denitrificans ATCC 33394]
          Length = 569

 Score = 45.4 bits (106), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 34/139 (24%), Positives = 60/139 (43%), Gaps = 9/139 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I  + SG+  W   G ++ + + + +R ++ +    E+  P +    LW++SG WD Y  
Sbjct: 32  IKANASGLYTWMPMGLRVLRKVENIVREEMNRAGAIELLMPVIQPADLWKESGRWDFYGD 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVA-VFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            +  +    D       F   P  C   V  +    + SY++LP       + +R+E   
Sbjct: 92  ELLRITDRHDN-----EFCFSP-TCEEMVTDIVRKEVNSYKQLPKNFYHIQTKFRDERRP 145

Query: 376 SLHGLMRVRGFTQDDAHVF 394
              G+MR R F   DA+ F
Sbjct: 146 RF-GVMRAREFVMKDAYSF 163


>gi|159155613|gb|AAI54534.1| LOC562037 protein [Danio rerio]
          Length = 476

 Score = 45.4 bits (106), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 70/332 (21%), Positives = 131/332 (39%), Gaps = 63/332 (18%)

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV- 393
           A++P +       +   ++S+R+LP++L ++ +V R E        +R R F   + H  
Sbjct: 81  AVRPTSETVMYPAYAKWVQSHRDLPIKLNQWCNVVRWEFKHP-QPFLRTREFLWQEGHTA 139

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
           F TKE+   E L+I +L   +Y++     ++    T  EK  G D             ++
Sbjct: 140 FATKEEATEEVLQILDLYARVYEELMAIPVVKGRKTEKEKFAGGD---------YTTTVE 190

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS 513
              ++S   I        G  +   FE + +D                 P      Y NS
Sbjct: 191 AFISASGRAIQGATSHHLGQNFSRMFEIVFEDP--------------KKPGEKQLAYQNS 236

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIV--TTITSSAVEY 567
                         +G   R IG++      N+ L L P    +Q I+    IT++  E 
Sbjct: 237 --------------WGITTRTIGVLTMVHGDNMGLVLPPRVACLQVIIIPCGITATLPEA 282

Query: 568 AQEI--------ANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASE-R 617
            +++         + L+   + ++ D R N +  +K     +K +PI    G K+  + +
Sbjct: 283 EKDLLLDQCSKYLSRLQKADIRVKADLRDNYSPGWKFNHWELKGVPIRFEVGPKDLKQGQ 342

Query: 618 SIGIRRFGSTTTQKVSLLDA-----IPILTKE 644
            + +RR    T +K+++ +A     IP L +E
Sbjct: 343 FVAVRR---DTGEKITVKEADAEKKIPNLLEE 371


>gi|119613715|gb|EAW93309.1| glutamyl-prolyl-tRNA synthetase, isoform CRA_a [Homo sapiens]
          Length = 1511

 Score = 45.4 bits (106), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 68/307 (22%), Positives = 118/307 (38%), Gaps = 55/307 (17%)

Query: 334  FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH- 392
             A++P +       +   ++S+R+LP++L ++ +V R E        +R R F   + H 
Sbjct: 1115 IAIRPTSETVMYPAYAKWVQSHRDLPIKLNQWCNVVRWEFKHP-QPFLRTREFLWQEGHS 1173

Query: 393  VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
             F T E+   E L+I +L   +Y++     ++    T  EK  G D             +
Sbjct: 1174 AFATMEEAAEEVLQILDLYAQVYEELLAIPVVKGRKTEKEKFAGGD---------YTTTI 1224

Query: 453  DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
            +   ++S   I  G     G  +   FE + +D                +P      Y N
Sbjct: 1225 EAFISASGRAIQGGTSHHLGQNFSKMFEIVFEDP--------------KIPGEKQFAYQN 1270

Query: 513  SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTT------ITSSAVE 566
            S              +G   R IG+M      N+ L L P  A V        IT++  E
Sbjct: 1271 S--------------WGLTTRTIGVMTMVHGDNMGLVLPPRVACVQVVIIPCGITNALSE 1316

Query: 567  YAQE--IANL------LKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKE-ASE 616
              +E  IA        L S ++ +  D R N +  +K     +K +PI +  G ++  S 
Sbjct: 1317 EDKEALIAKCNDYRRRLLSVNIRVRADLRDNYSPGWKFNHWELKGVPIRLEVGPRDMKSC 1376

Query: 617  RSIGIRR 623
            + + +RR
Sbjct: 1377 QFVAVRR 1383


>gi|312134434|ref|YP_004001772.1| aaa atpase [Caldicellulosiruptor owensensis OL]
 gi|311774485|gb|ADQ03972.1| AAA ATPase [Caldicellulosiruptor owensensis OL]
          Length = 554

 Score = 45.4 bits (106), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 39/160 (24%), Positives = 79/160 (49%), Gaps = 4/160 (2%)

Query: 39  VAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIG 97
           +A  ++ ++ +L   + R+  ++ I       + + R S   ++  A + ++ E  V + 
Sbjct: 43  IAAKVDNEIKELKYVISRDCKVKFIDMTQEDGMRIYRRSLIFVLIVATRMLFKEA-VNVQ 101

Query: 98  PIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAY 157
             +  G Y + +  +  SS ++  I++KM+ II +D  F ++ +S ++A +LFE K    
Sbjct: 102 HSLSKGLYCEVENRK-LSSQDVELIKQKMKWIIEQDFQFRREKVSKDEAVKLFEEKGFYD 160

Query: 158 KVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
           K   ++     E V +Y  G++ D   G  V STG +K F
Sbjct: 161 KARTIK-FSENEFVYIYYCGDYVDYFYGHLVPSTGYLKIF 199


>gi|158319516|ref|YP_001512023.1| prolyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
 gi|166980096|sp|A8MLB3|SYP_ALKOO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|158139715|gb|ABW18027.1| prolyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
          Length = 480

 Score = 45.4 bits (106), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 80/377 (21%), Positives = 152/377 (40%), Gaps = 57/377 (15%)

Query: 272 GWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHLWQQSG-HWDSYRANMFAVKCADDTIK 329
           G+ I++ + +YM ++ K+  ++    P ++ + L ++   H + +   +  V    +   
Sbjct: 48  GYAIWENIQNYMDKRFKETGHKNCYFPLLIPESLLKKEAEHVEGFAPEVAWVTHGGNEEL 107

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
             R   ++P +      +++  L SYR+LP    ++ SV R E S      +R   F   
Sbjct: 108 AER-LCVRPTSETIICEMYSKWLTSYRDLPFLYNQWCSVVRWEKS--TRPFLRTSEFLWQ 164

Query: 390 DAHVFC-TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIM 448
           + H    T E+   E L++ N    IY++                          AEN++
Sbjct: 165 EGHTLHETYEEAQAETLQMLN----IYRE-------------------------TAENLL 195

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFN 507
              +   + S +++         GA+     E ++ D  G+  Q GT   +  +  + F+
Sbjct: 196 AMPVVIGQKSEKEKF-------AGAYATYTMEALMHD--GKALQAGTSHNLGQHFTTAFD 246

Query: 508 AFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTITS- 562
             Y + + E  HP   +   +G   R IG +I     N    LP  ++P Q ++  + S 
Sbjct: 247 ITYSDRNGELKHP---YHTSWGVSTRLIGGIIMVHGDNRGLVLPPGIAPTQVVIVPVASH 303

Query: 563 --SAVEYAQEIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSI 619
               ++ A E+ + LK     +E D R N +  +K  E  +K +PI I  G ++      
Sbjct: 304 KEGVLDKANELRDRLKDK-FRVELDDRDNYSPGWKFNEWEMKGVPIRIEIGPRDIENNQA 362

Query: 620 GIRRFGSTTTQKVSLLD 636
            + R        VSL D
Sbjct: 363 MLFRRDELEKDAVSLDD 379


>gi|85374371|ref|YP_458433.1| alanyl-tRNA synthetase [Erythrobacter litoralis HTCC2594]
 gi|122544241|sp|Q2N9K5|SYA_ERYLH RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|84787454|gb|ABC63636.1| AlaS, alanyl-tRNA synthetase [Erythrobacter litoralis HTCC2594]
          Length = 887

 Score = 45.4 bits (106), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 11/129 (8%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++  A+++   E     G ++ ED   +DF   +P S D++A IE ++ E I  +
Sbjct: 565 HSATHLVHAALRNRLGEHVTQKGSLVAEDRLRFDFSHPKPLSEDDIAAIEAEVNEEIRAN 624

Query: 134 SPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
                + +S + A +     LF  +K   +V +L      +    Y      +LC G HV
Sbjct: 625 ETVTTRLMSPDDAVDAGALALF-GEKYGEEVRVLSMGRRSKEGRNYS----VELCGGTHV 679

Query: 189 RSTGQVKKF 197
           R+TG ++ F
Sbjct: 680 RATGDIQLF 688


>gi|121608636|ref|YP_996443.1| alanyl-tRNA synthetase [Verminephrobacter eiseniae EF01-2]
 gi|205830282|sp|A1WIG8|SYA_VEREI RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|121553276|gb|ABM57425.1| alanyl-tRNA synthetase [Verminephrobacter eiseniae EF01-2]
          Length = 872

 Score = 45.4 bits (106), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 66/144 (45%), Gaps = 20/144 (13%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKM 126
           R+  +  HS  H+M +A++++    VQ     +  +   +DF      SS EL +IE+++
Sbjct: 555 RAATMRNHSATHLMHQALRAVLGSHVQQKGSLVNAERTRFDFAHNAAVSSAELREIERRV 614

Query: 127 QEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
            E I  + P   + +  E AR      LF+ K  A  V +L+   ++E            
Sbjct: 615 NEEILANQPTQARVMDIEAARSSGAMMLFDEKYGA-AVRVLDIGSSRE------------ 661

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAG 205
           LC G HV+ TG +   FK++   G
Sbjct: 662 LCAGTHVQRTGDI-GLFKVVAEGG 684


>gi|305681315|ref|ZP_07404122.1| proline--tRNA ligase [Corynebacterium matruchotii ATCC 14266]
 gi|305659520|gb|EFM49020.1| proline--tRNA ligase [Corynebacterium matruchotii ATCC 14266]
          Length = 666

 Score = 45.4 bits (106), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 40/174 (22%), Positives = 75/174 (43%), Gaps = 18/174 (10%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R     +I     GV  W   G +  + +   +R ++ +   +E+  P 
Sbjct: 101 DAEVPSHKLLVRAG---YIRRAAPGVYTWLPLGLRTLRKIEKVVREEMDNIGAQELLFPA 157

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L +  ++Q+  W  Y  N+F +K  D    D+       +  P H  +F   +K    S
Sbjct: 158 LLSREPYEQTRRWTEYGDNLFRLK--DRKGNDM-------LLGPTHEEMFARQVKDMFTS 208

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
           Y++ PV L +  + YR+E      G++R R F   D++ F   +    +    H
Sbjct: 209 YKDFPVTLYQIQTKYRDEER-PRAGILRGREFVMKDSYSFDMTDAGLEQSYLAH 261


>gi|39969493|ref|XP_366137.1| hypothetical protein MGG_10357 [Magnaporthe oryzae 70-15]
 gi|145015163|gb|EDJ99731.1| hypothetical protein MGG_10357 [Magnaporthe oryzae 70-15]
          Length = 566

 Score = 45.4 bits (106), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 86/405 (21%), Positives = 164/405 (40%), Gaps = 70/405 (17%)

Query: 252 EMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLD-QHLWQQSGH 310
           E+  F+I    +  ++   + W  FQ  I  M        EE + P  L  + L ++  H
Sbjct: 90  EISGFYILRPAAMFVWSQIRKW--FQEKIDVM------GVEEASFPMFLSSKSLEKEKDH 141

Query: 311 WDSYRANMFAVKCADDTIKDLRT-FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVY 369
            + +   +  V  A D  KDL    A++P +       ++  ++S+R+LP+RL ++ SV 
Sbjct: 142 VEGFAPELAWVTKAGD--KDLEVPVAVRPTSEAVMYPYYSKWIRSHRDLPLRLNQWNSVV 199

Query: 370 RNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLS 428
           R E   +    +R R F   + H    T+E    E L+I      +Y     E+++    
Sbjct: 200 RWEAKQTTP-FLRAREFLWQEGHTAHLTEEDAGKEVLEILEHYAGVY-----EQLL---- 249

Query: 429 TRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE-YILKDAI 487
                          A  +++G     K +  ++         G +Y    E YI  +  
Sbjct: 250 ---------------AVPVVRG-----KKTENEKFA-------GGYYTTTVEGYIPSN-- 280

Query: 488 GRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI---ENFK 543
           GR  Q  T   +  N    F+    +   EK H + + +  +G   R IG+M+    + K
Sbjct: 281 GRGIQGATSHCLGQNFSKMFDITVEDPKKEKGH-LHVWQNSWGLSTRVIGVMVMIHGDDK 339

Query: 544 GNL-PLWLSPIQAIVTTITSSAVEYAQ----------EIANLLKSHHLSIETDFRNE-TI 591
           G + P  ++  QA++  +  +A    +          E+   LK   + +E+D R+  T 
Sbjct: 340 GLVFPPRIARTQAVLIPVGITAKTTPEERTAHTAKLDELNKTLKDAGVRVESDMRDGYTP 399

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
            +K     +K +P+ +  G K+A++  +   R  +     +++ D
Sbjct: 400 AWKFNHWELKGVPLRLEFGPKDAAKDQVAFARRDTGEKGSIAIAD 444


>gi|118580173|ref|YP_901423.1| prolyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
 gi|166980138|sp|A1APU5|SYP_PELPD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|118502883|gb|ABK99365.1| prolyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
          Length = 576

 Score = 45.4 bits (106), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 45/102 (44%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P V    LW++SG W  Y   +   +   D       F + P +      +    +
Sbjct: 68  EMLMPSVQPAELWEESGRWSFYGKELLRFRDRKDG-----EFCMGPTHEEVITDMVRREI 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSYR++PV   +  + +R+E      GLMR R F   DA+ F
Sbjct: 123 KSYRQMPVNFYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSF 163


>gi|289423561|ref|ZP_06425362.1| alanine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
 gi|289156063|gb|EFD04727.1| alanine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
          Length = 878

 Score = 45.4 bits (106), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 34/140 (24%), Positives = 65/140 (46%), Gaps = 11/140 (7%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKM 126
           R  A   HS  H++ +A++++  E V  A   +  D   +DF   +  + D+L +IE+ +
Sbjct: 558 RMDAARNHSATHLLHKALKTVLGEHVNQAGSLVAPDRLRFDFTHFESITKDQLLEIEEMV 617

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRG 185
            + +    P   + ++   A+E+  +     K          ENV +   G+   +LC G
Sbjct: 618 NDFVLESMPITAEVMNINAAKEMGATALFGEKY--------GENVRVVTMGDCSIELCGG 669

Query: 186 PHVRSTGQVKKFFKLMKVAG 205
            H+ +T QV   FK++  +G
Sbjct: 670 THLDNTAQV-GLFKIVSESG 688


>gi|62241042|ref|NP_004437.2| bifunctional aminoacyl-tRNA synthetase [Homo sapiens]
 gi|288558855|sp|P07814|SYEP_HUMAN RecName: Full=Bifunctional aminoacyl-tRNA synthetase; AltName:
            Full=Cell proliferation-inducing gene 32 protein;
            Includes: RecName: Full=Glutamyl-tRNA synthetase;
            AltName: Full=Glutamate--tRNA ligase; Short=GluRS;
            Includes: RecName: Full=Prolyl-tRNA synthetase; AltName:
            Full=Proline--tRNA ligase
 gi|116496781|gb|AAI26276.1| EPRS protein [Homo sapiens]
 gi|223460490|gb|AAI36466.1| Glutamyl-prolyl-tRNA synthetase [Homo sapiens]
          Length = 1512

 Score = 45.4 bits (106), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 68/307 (22%), Positives = 118/307 (38%), Gaps = 55/307 (17%)

Query: 334  FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH- 392
             A++P +       +   ++S+R+LP++L ++ +V R E        +R R F   + H 
Sbjct: 1116 IAIRPTSETVMYPAYAKWVQSHRDLPIKLNQWCNVVRWEFKHP-QPFLRTREFLWQEGHS 1174

Query: 393  VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
             F T E+   E L+I +L   +Y++     ++    T  EK  G D             +
Sbjct: 1175 AFATMEEAAEEVLQILDLYAQVYEELLAIPVVKGRKTEKEKFAGGD---------YTTTI 1225

Query: 453  DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
            +   ++S   I  G     G  +   FE + +D                +P      Y N
Sbjct: 1226 EAFISASGRAIQGGTSHHLGQNFSKMFEIVFEDP--------------KIPGEKQFAYQN 1271

Query: 513  SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTT------ITSSAVE 566
            S              +G   R IG+M      N+ L L P  A V        IT++  E
Sbjct: 1272 S--------------WGLTTRTIGVMTMVHGDNMGLVLPPRVACVQVVIIPCGITNALSE 1317

Query: 567  YAQE--IANL------LKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKE-ASE 616
              +E  IA        L S ++ +  D R N +  +K     +K +PI +  G ++  S 
Sbjct: 1318 EDKEALIAKCNDYRRRLLSVNIRVRADLRDNYSPGWKFNHWELKGVPIRLEVGPRDMKSC 1377

Query: 617  RSIGIRR 623
            + + +RR
Sbjct: 1378 QFVAVRR 1384


>gi|254441019|ref|ZP_05054512.1| prolyl-tRNA synthetase [Octadecabacter antarcticus 307]
 gi|198251097|gb|EDY75412.1| prolyl-tRNA synthetase [Octadecabacter antarcticus 307]
          Length = 453

 Score = 45.4 bits (106), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 40/183 (21%), Positives = 76/183 (41%), Gaps = 11/183 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  +G+  W   G+K+ + +   +   + +  +  +  P +    LW++SG +D Y  
Sbjct: 32  IKQSSAGIYSWLPLGFKVLKRIEQIVHEEQERAGHIAMLMPTIQSADLWRESGRYDDYGD 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  +     T ++       P N      +F   + SY+ LP+ L      +R+E    
Sbjct: 92  EMLRI-----TDRNKNDLLYGPTNEELITDIFRSHVSSYKALPLTLYHIQWKFRDERRPR 146

Query: 377 LHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
             G+MR R F   D + F  TKE   +   +     +  Y+  G + I ++  + P   +
Sbjct: 147 F-GVMRGREFYMKDGYTFDLTKEDAMHAYNRHLVSYLRTYERMGLQAIPMRADSGP---I 202

Query: 436 GSD 438
           G D
Sbjct: 203 GGD 205


>gi|163814106|ref|ZP_02205498.1| hypothetical protein COPEUT_00259 [Coprococcus eutactus ATCC 27759]
 gi|158450555|gb|EDP27550.1| hypothetical protein COPEUT_00259 [Coprococcus eutactus ATCC 27759]
          Length = 887

 Score = 45.4 bits (106), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 52/238 (21%), Positives = 99/238 (41%), Gaps = 47/238 (19%)

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSDE 118
           E+    + R+L    HS  H++ +A++ +  +     G ++E G   +DF  +Q  + +E
Sbjct: 559 ELTVDAENRALICNNHSATHLLQKALKMVLGDHVEQAGSLVEPGRLRFDFSHDQAMTKEE 618

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTL 173
           + ++E  + E I  D P     ++ ++A++     LF  K               E V +
Sbjct: 619 IKKVEDIVNEQIQLDVPVCTDIMTVDEAKKTGAMALFGEK-------------YGEKVRV 665

Query: 174 YRQGEWF-DLCRGPHVRSTGQVKKFFKLMKVAGA-----------------YWRG----- 210
              G++  + C G HV +TG V   FK++   G                  Y+R      
Sbjct: 666 VSIGDFSKEFCGGTHVANTG-VIGMFKIVSETGVAAGTRRIEALTSIGALEYYRSMESEL 724

Query: 211 -DSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREM--DLFHIAEDGSGV 265
            ++ +   + I+G A   +Q L +      E++K    K+A+E   D+   A D  G+
Sbjct: 725 VEAAKAAKTDIHGVAARIEQLLAEVKELTNENKKL-KDKMAKEAAGDVLSNAIDKDGI 781


>gi|302784007|ref|XP_002973776.1| hypothetical protein SELMODRAFT_414115 [Selaginella moellendorffii]
 gi|300158814|gb|EFJ25436.1| hypothetical protein SELMODRAFT_414115 [Selaginella moellendorffii]
          Length = 322

 Score = 45.4 bits (106), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 19/33 (57%), Positives = 25/33 (75%)

Query: 94  VAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKM 126
           V IGP IE GFYYDFD ++P S  +L +I+K+M
Sbjct: 85  VTIGPWIEKGFYYDFDLKEPLSDKDLKKIKKEM 117


>gi|257413581|ref|ZP_04743496.2| proline--tRNA ligase [Roseburia intestinalis L1-82]
 gi|257203071|gb|EEV01356.1| proline--tRNA ligase [Roseburia intestinalis L1-82]
          Length = 241

 Score = 45.4 bits (106), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 64/138 (46%), Gaps = 7/138 (5%)

Query: 288 KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
           K D +E++ P V+   LW++SG ++S    +        T ++     L   +    V +
Sbjct: 71  KLDGQEVSFPVVMPASLWEESGRYESVGEELLRF-----TDRNNAKMVLGMTHEEAAVHL 125

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-K 406
                KSY + P  + +  + +R+E      GL+RVR FT  DA+ F T ++  N+   K
Sbjct: 126 VREYAKSYNKYPFMIYQIQTKFRDEARPRA-GLIRVREFTMKDAYSFHTSQEDLNQYYEK 184

Query: 407 IHNLIISIYKDFGFEKIM 424
            H     I++  G  +++
Sbjct: 185 CHKAYERIFERAGIPEVV 202


>gi|146276453|ref|YP_001166612.1| prolyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17025]
 gi|166980148|sp|A4WPJ3|SYP_RHOS5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|145554694|gb|ABP69307.1| prolyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17025]
          Length = 445

 Score = 45.4 bits (106), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 41/186 (22%), Positives = 78/186 (41%), Gaps = 17/186 (9%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  +G+  W   G+K  + +   +   +I+  +  +  P +    LW++SG +D Y  
Sbjct: 32  IKQQAAGIYSWLPLGFKALKRVEQIVHEEQIRAGHIPLLMPTLQPADLWRESGRYDDYGE 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  +     T +  R     P N      +F   + SY++LP+ L      +R+E    
Sbjct: 92  EMLRI-----TDRHKRDMLYGPTNEEMITDIFRSHVNSYKDLPLTLYHVQWKFRDEIRPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL----IISIYKDFGFEKIMVKLSTRPE 432
             G+MR R F   D + F      F+  +  +N      +  Y+  G + I ++ ++ P 
Sbjct: 147 F-GVMRGREFLMKDGYNFDLD---FDSAIHAYNRHMVSYLRTYERMGLQAIPMRAASGP- 201

Query: 433 KRVGSD 438
             +G D
Sbjct: 202 --IGGD 205


>gi|325678420|ref|ZP_08158040.1| proline--tRNA ligase [Ruminococcus albus 8]
 gi|324109921|gb|EGC04117.1| proline--tRNA ligase [Ruminococcus albus 8]
          Length = 480

 Score = 45.4 bits (106), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 7/97 (7%)

Query: 524 HRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTITS---SAVEYAQEIANLLK 576
           H+  +G   R IG +I     +    LP  ++PIQA++  I       +E AQE+   LK
Sbjct: 259 HQTSWGVTTRLIGAIIMTHGDDNGLVLPPAVAPIQAVIVPIQQFKEGVLEKAQEVCEQLK 318

Query: 577 SHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
           +  + ++ D   ++  +K  E+ +K +P+ I  G K+
Sbjct: 319 AAGIRVKVDDSEQSPGWKFAEYEMKGVPVRIELGPKD 355


>gi|328543180|ref|YP_004303289.1| Alanyl-tRNA synthetase, class IIc:phosphoesterase,
           DHHA1:Alanyl-transfer RNA synthetase [polymorphum gilvum
           SL003B-26A1]
 gi|326412926|gb|ADZ69989.1| Alanyl-tRNA synthetase, class IIc:Phosphoesterase,
           DHHA1:Alanyl-transfer RNA synthetase [Polymorphum gilvum
           SL003B-26A1]
          Length = 887

 Score = 45.4 bits (106), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 35/145 (24%), Positives = 66/145 (45%), Gaps = 12/145 (8%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSS 116
           ++++I   D R+     HS  H++ EA++ +        G ++  +   +DF   +P S 
Sbjct: 546 ALDMIVDPDRRTAIRSNHSATHLLHEALREVLGGHVAQKGSLVSPERLRFDFSHPKPMSE 605

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESK--KEAYKVEILESIPAKE 169
           DEL  +E    EI+ +++    + ++ ++A E     LF  K   E   V +  ++   +
Sbjct: 606 DELKVVEDYANEIVLQNAAVETRLMAVDEAIESGAMALFGEKYGDEVRVVSMGTALHGDK 665

Query: 170 NVTLYRQGEWFDLCRGPHVRSTGQV 194
               Y      +LC G HVR TG +
Sbjct: 666 AGKAYS----VELCGGTHVRRTGDI 686


>gi|301769371|ref|XP_002920104.1| PREDICTED: 39S ribosomal protein L39, mitochondrial-like
           [Ailuropoda melanoleuca]
          Length = 335

 Score = 45.4 bits (106), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 88/192 (45%), Gaps = 24/192 (12%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIR---HS 76
           +T  + A  +S    +K++   ++G+  D+  P+ +   IE +T +D     V +    S
Sbjct: 83  STPYNCAMHLSEWYCRKSILALVDGQPWDMYKPLTKSCEIEFLTFKDRDPGEVNKAYWRS 142

Query: 77  CAHIMAEAVQSIWPE------VQVAIGPIIEDGFYYD------FDKEQPFSSDELAQIEK 124
           CA +M   ++  + +      V+    P+I   F YD       D+  P + + L  + K
Sbjct: 143 CAMMMGCVIERAFKDEYVVSLVRAPEVPVICGAFCYDVVLDKRLDEWMP-TKENLRSLTK 201

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN----VTLYRQGEWF 180
               +I +D PF    +  + A E+F+  K  YK++ +E   A +N    V L+R G++ 
Sbjct: 202 DAHSLIYKDLPFETLEVEAKVALEIFQRNK--YKMDFVEE-KASQNPERIVKLHRFGDFI 258

Query: 181 DLCRGPHVRSTG 192
           D+  GP +  T 
Sbjct: 259 DVSEGPVIPRTS 270


>gi|241763800|ref|ZP_04761846.1| prolyl-tRNA synthetase [Acidovorax delafieldii 2AN]
 gi|241366932|gb|EER61337.1| prolyl-tRNA synthetase [Acidovorax delafieldii 2AN]
          Length = 580

 Score = 45.4 bits (106), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 31/134 (23%), Positives = 63/134 (47%), Gaps = 7/134 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           G+G+  +   G ++ + + + +R ++ +    E+  P V    LWQ++G ++     +  
Sbjct: 36  GAGIYNYMPMGLRVIRKVEAIVREEMNRAGAVELTMPVVQPAELWQETGRFEKMGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           ++      +  R F ++P +      +    LKSY++LP    +  + +R+E      GL
Sbjct: 96  IQD-----RHGRDFVVQPTSEEVITDIARQELKSYKQLPKNFYQIQTKFRDERRPRF-GL 149

Query: 381 MRVRGFTQDDAHVF 394
           MR R F   DA+ F
Sbjct: 150 MRGREFIMKDAYSF 163


>gi|227822193|ref|YP_002826164.1| alanyl-tRNA synthetase [Sinorhizobium fredii NGR234]
 gi|227341193|gb|ACP25411.1| alanyl-tRNA synthetase [Sinorhizobium fredii NGR234]
          Length = 887

 Score = 45.4 bits (106), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 37/150 (24%), Positives = 67/150 (44%), Gaps = 13/150 (8%)

Query: 54  VREGSIEIITPEDPRSLAV-IRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKE 111
           V+ G    +T +  R L +   HS  H++ EA++ +        G ++  +   +D    
Sbjct: 542 VKTGEAAALTVDHARRLRLRANHSATHLLHEALREVLGTHVAQKGSLVAPERLRFDVSHP 601

Query: 112 QPFSSDELAQIEKKMQEIIARDSPFLKQYLS-----HEKARELFESK--KEAYKVEILES 164
           +P S++EL  +E+   E+I +++P   + +S      E A  LF  K   E   V + + 
Sbjct: 602 KPMSAEELRIVEEMANEVIVQNTPVTTRLMSVDDAIAEGAMALFGEKYGDEVRVVSMGQG 661

Query: 165 IPAKENVTLYRQGEWFDLCRGPHVRSTGQV 194
           I   +    Y      +LC G HV +TG +
Sbjct: 662 IRGSKAGRPYS----VELCGGTHVSATGDI 687


>gi|254474756|ref|ZP_05088142.1| prolyl-tRNA synthetase [Ruegeria sp. R11]
 gi|214028999|gb|EEB69834.1| prolyl-tRNA synthetase [Ruegeria sp. R11]
          Length = 450

 Score = 45.4 bits (106), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 39/183 (21%), Positives = 78/183 (42%), Gaps = 11/183 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  +G+  W   G+K+ + +   +   +++  +  +    +    LW++SG +D Y  
Sbjct: 32  IKQSAAGIYSWLPLGFKVLKKIEGIVHEEQMRAGHIPMLMSTMQPADLWRESGRYDDYGQ 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  +K   D     R     P N      +F + + SY++LP+ + +    +R+E    
Sbjct: 92  EMLRIKDRHD-----RDMLFGPTNEEMITDIFRNHVSSYKDLPLTMYQVQWKFRDEIRPR 146

Query: 377 LHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
             G+MR R F   D + F  +KE   +   +     +  Y+  G + I ++    P   +
Sbjct: 147 F-GVMRGREFYMKDGYNFDLSKEDALHAYNRHLVSYLRTYERMGLQAIPMRADGGP---I 202

Query: 436 GSD 438
           G D
Sbjct: 203 GGD 205


>gi|71083347|ref|YP_266066.1| alanine-tRNA ligase [Candidatus Pelagibacter ubique HTCC1062]
 gi|83305853|sp|Q4FMX6|SYA_PELUB RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|71062460|gb|AAZ21463.1| alanine-tRNA ligase [Candidatus Pelagibacter ubique HTCC1062]
          Length = 889

 Score = 45.4 bits (106), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 67/131 (51%), Gaps = 17/131 (12%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++ EA++ +  E     G +++ D   +DF   +P S +E+ +IE  +  II + 
Sbjct: 564 HSATHLLHEALRRVLGEHVTQKGSLVQSDRLRFDFSHMKPISDEEIRKIEHYVNSIIEKK 623

Query: 134 SPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWF--DLCRGP 186
           S    + ++ ++A E     LF  +K   +V +L S+  +E       G++F  +LC G 
Sbjct: 624 SEVKTRIMTPKEAVENGALALF-GEKYGDEVRVL-SMGDEE-------GKFFSTELCGGT 674

Query: 187 HVRSTGQVKKF 197
           HV +T  + KF
Sbjct: 675 HVVNTADIGKF 685


>gi|82617275|emb|CAI64180.1| glycyl-tRNA synthetase [uncultured archaeon]
          Length = 594

 Score = 45.4 bits (106), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 57/132 (43%), Gaps = 19/132 (14%)

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRE-LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
           R   L+P    G    F H  + YRE LP  + + G  YRNE S    G++R+R FTQ +
Sbjct: 165 RVGYLRPETAQGMFVDFEHLFRFYREKLPFGVTQIGKAYRNEIS-PRQGVIRLREFTQAE 223

Query: 391 AHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKG 450
           A +F       N   K H     I      E ++++    P +RV   A  DD      G
Sbjct: 224 AEIF------INPTEKNHPKFSMI------EDMVLRYYPAPHQRVSHPAHEDDG-----G 266

Query: 451 VLDTIKNSSQDR 462
           +++     + DR
Sbjct: 267 IIELNARDAVDR 278


>gi|294675120|ref|YP_003575736.1| phosphoribulokinase/uridine kinase family protein [Prevotella
           ruminicola 23]
 gi|294472773|gb|ADE82162.1| phosphoribulokinase/uridine kinase family protein [Prevotella
           ruminicola 23]
          Length = 553

 Score = 45.4 bits (106), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 39/181 (21%), Positives = 79/181 (43%), Gaps = 2/181 (1%)

Query: 18  PVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIRHS 76
           PV +T  DV       +    ++  +N KV  +   + ++  +E +             S
Sbjct: 19  PVGSTIEDVYALSGVEIEHGPISAHVNNKVEGMHYRLYKQKQVEFLDICSSSGSRAYTRS 78

Query: 77  CAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPF 136
              ++ +AV  ++   +V+I   + +G + +    +P S D++  I ++MQEII    P 
Sbjct: 79  LFFVLCKAVHDLFTPCKVSIDIPVSNGSFVNLSIGRPISLDDVGAIRRRMQEIIDAALPI 138

Query: 137 LKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKK 196
            +   + E+A  +F+      KV++L+S   +   T Y    + D   G  + +T Q+  
Sbjct: 139 HRYETTTEEAIRMFDILHNRSKVKLLKST-GRLYTTYYEIDGYIDYYYGALLTNTKQLYL 197

Query: 197 F 197
           F
Sbjct: 198 F 198


>gi|15678639|ref|NP_275754.1| prolyl-tRNA synthetase [Methanothermobacter thermautotrophicus str.
           Delta H]
 gi|3334356|sp|O26708|SYP_METTH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|2621691|gb|AAB85117.1| prolyl-tRNA synthetase [Methanothermobacter thermautotrophicus str.
           Delta H]
          Length = 482

 Score = 45.4 bits (106), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 78/384 (20%), Positives = 152/384 (39%), Gaps = 61/384 (15%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVL-DQHLWQQSGHWDSYRANMFAVK 322
           G+  W   G+ I +  +  +RR +  D+EE+  P ++ +  L +++ H   +   ++ V 
Sbjct: 42  GMHVWMPHGFMIRKNTLKILRRILDRDHEEVLFPLLVPEDELAKEAIHVKGFEDEVYWVT 101

Query: 323 CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMR 382
               + K  R  AL+P +      +F   ++S+ +LP+R  +  + +R E +     L+R
Sbjct: 102 HGGLS-KLQRKLALRPTSETVMYPMFALWVRSHTDLPMRFYQVVNTFRYE-TKHTRPLIR 159

Query: 383 VRGFTQ-DDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK--LSTRPEKRVGSDA 439
           VR  T   +AH   T     +E  +     + IYK+F F  + +   ++ RP        
Sbjct: 160 VREITTFKEAH---TIHATASEAEEQVERAVEIYKEF-FNSLGIPYLITRRPP------- 208

Query: 440 LWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVD 499
            WD                             G+ Y   F+ ++ D  G+  Q GT+   
Sbjct: 209 -WDKF--------------------------PGSEYTVAFDTLMPD--GKTLQIGTVH-- 237

Query: 500 FNLPSRF-NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP------ 552
            NL   F   F +   + +     +H+  +G  +R I  +I        L L P      
Sbjct: 238 -NLGQTFARTFEIKFETPEGDHEYVHQTCYGLSDRVIASVIAIHGDESGLCLPPDVAAHQ 296

Query: 553 ---IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIIC 609
              +  I        +E  +E+ + L++    +  D R+     K  E  ++ +P+ +  
Sbjct: 297 VVIVPIIFKKAAEEVMEACRELRSRLEAAGFRVHLDDRDIRAGRKYYEWEMRGVPLRVEI 356

Query: 610 GDKEASERSIGIRRFGSTTTQKVS 633
           G ++  + +  I R    T +KV+
Sbjct: 357 GPRDLEKGAAVISR--RDTGEKVT 378


>gi|330816605|ref|YP_004360310.1| Alanyl-tRNA synthetase [Burkholderia gladioli BSR3]
 gi|327368998|gb|AEA60354.1| Alanyl-tRNA synthetase [Burkholderia gladioli BSR3]
          Length = 874

 Score = 45.4 bits (106), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 66/137 (48%), Gaps = 20/137 (14%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H+M +A++ +        G +++ D   +DF    P S DE+ ++E  +   I  +
Sbjct: 564 HSVTHLMHKALREVLGSHVQQKGSLVDADKTRFDFAHNAPMSDDEIRRVEAIVNAEILAN 623

Query: 134 SPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           SP +   +S+++A +     LF  +K   +V +L+   ++E            LC G HV
Sbjct: 624 SPGIVSNMSYDEAVKGGAMALF-GEKYGDEVRVLDLGFSRE------------LCGGTHV 670

Query: 189 RSTGQVKKFFKLMKVAG 205
           R TG +  FFK++   G
Sbjct: 671 RRTGDI-GFFKIVMEGG 686


>gi|317493956|ref|ZP_07952373.1| alanyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316918283|gb|EFV39625.1| alanyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 875

 Score = 45.4 bits (106), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 42/172 (24%), Positives = 72/172 (41%), Gaps = 12/172 (6%)

Query: 36  KKAVAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVA 95
           K   A+   GKV   S  V + S+E    E  RS   + HS  H++  A++ +  +    
Sbjct: 526 KYGQAIGHQGKVAQGSVKVGD-SVEATIDEARRSRIRLNHSATHLLHAALRQVLGDHVSQ 584

Query: 96  IGPIIED-GFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            G ++ D    +DF   +    +++ Q+E  +   I R+ P     +  E A+       
Sbjct: 585 KGSLVSDRNLRFDFSHFEAMKPEQIRQVEDIVNAQIRRNLPIETNIMDLEDAK------- 637

Query: 155 EAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKFFKLMKVAG 205
            A     L      E+V +   G++  +LC G H R TG +   F++   AG
Sbjct: 638 -AKGAMALFGEKYDESVRVLSMGDFSTELCGGTHARQTGDI-GLFRITSEAG 687


>gi|301769275|ref|XP_002920053.1| PREDICTED: bifunctional aminoacyl-tRNA synthetase-like [Ailuropoda
            melanoleuca]
          Length = 1509

 Score = 45.4 bits (106), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 73/320 (22%), Positives = 125/320 (39%), Gaps = 58/320 (18%)

Query: 334  FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH- 392
             A++P +       +   ++S+R+LP+RL ++ +V R E        +R R F   + H 
Sbjct: 1113 IAVRPTSETVMYPAYAKWVQSHRDLPIRLNQWCNVVRWEFKHP-QPFLRTREFLWQEGHS 1171

Query: 393  VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
             F T E+   E L+I +L   +Y++     ++    T  EK  G D             L
Sbjct: 1172 AFATFEEAAEEVLQILDLYAQVYEELLAIPVVKGRKTEKEKFAGGD---------YTTTL 1222

Query: 453  DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
            +   ++S   I        G  +   FE I +D                 P      Y N
Sbjct: 1223 EVFISASGRAIQGATSHHLGQNFSKMFEIIFEDP--------------KTPGEKQFAYQN 1268

Query: 513  SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIV--TTITSSAVE 566
            S              +G   R IG+M      N+ L L P    +Q +V    IT++  E
Sbjct: 1269 S--------------WGLTTRTIGVMTMVHGDNMGLVLPPRVASVQVVVIPCGITNALSE 1314

Query: 567  YAQE--IANL------LKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKE-ASE 616
              +E  IA        L S ++ +  D R N +  +K     +K +PI +  G ++  S 
Sbjct: 1315 EDREALIAKCNDYRKRLLSVNIRVRVDLRDNYSPGWKFNHWELKGVPIRLEVGPRDMKSC 1374

Query: 617  RSIGIRRFGSTTTQKVSLLD 636
            + + +RR    T +K+++ D
Sbjct: 1375 QFVAVRR---DTGEKLTVAD 1391


>gi|195016104|ref|XP_001984341.1| GH15069 [Drosophila grimshawi]
 gi|193897823|gb|EDV96689.1| GH15069 [Drosophila grimshawi]
          Length = 461

 Score = 45.4 bits (106), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 38/153 (24%), Positives = 72/153 (47%), Gaps = 9/153 (5%)

Query: 280 ISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKP 338
           I+ ++R +++   ++I+ P +    LW+++G  +   +  + V+  D + K    F + P
Sbjct: 61  INLVQRNMQEAGGQKISMPVLTPTQLWKKTGRLEGDISEFYMVR--DRSGKQ---FLMSP 115

Query: 339 MNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CT 396
            +     A+       SYR+LP+RL + G  +R+E   S  GLMR + F   D + F  T
Sbjct: 116 THEEAVTAMLATTAPISYRQLPLRLYQIGPKFRDELK-SRFGLMRAKEFLMKDMYTFDVT 174

Query: 397 KEQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
           KE       +I N     ++      + V+ +T
Sbjct: 175 KEAAEKTYARISNTYAQFFRQLEVPFVTVEAAT 207


>gi|322785635|gb|EFZ12290.1| hypothetical protein SINV_15907 [Solenopsis invicta]
          Length = 343

 Score = 45.4 bits (106), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 58/241 (24%), Positives = 104/241 (43%), Gaps = 23/241 (9%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPEDPRSLAV---IRHS 76
           +T  D A  IS S+AK +   ++N +V D+  P      ++++T + PR   +      +
Sbjct: 89  STPYDCARHISESVAKMSAIASVNDQVWDMHRPFTGNCELQLMTMQSPRLRQINSAFWRT 148

Query: 77  CAHIMAEAVQSIWPE-VQVAIG----PIIEDG-FYYDFDKEQPF---SSDELAQIEKKMQ 127
           C+ I+     S + + V V +     PII  G F YD   + P    +  EL  +     
Sbjct: 149 CSLILGAVADSAFKDNVNVHLHSFPIPIITSGSFTYDVFIDLPDWRPTESELRAMSALFV 208

Query: 128 EIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN---VTLYRQGEWFDLCR 184
           ++  R+    +  +    A  +F+     +K E + +I    +   VTLYR G+  D+ +
Sbjct: 209 KLTNRELLLERLEVPCSIALNMFQDN--PFKSEQIPNIAKDSDNDMVTLYRMGDHVDISK 266

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY-FLEESEK 243
           GP V ++G + +    + V+  +   D     L R  G A      L  + Y  LE+  K
Sbjct: 267 GPMVGNSGLIGR----VTVSAIHRLTDGPVDGLYRFQGIALPKGILLNHFAYGILEKRAK 322

Query: 244 R 244
           +
Sbjct: 323 K 323


>gi|226306102|ref|YP_002766062.1| prolyl-tRNA synthetase [Rhodococcus erythropolis PR4]
 gi|259511615|sp|C0ZY88|SYP_RHOE4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226185219|dbj|BAH33323.1| prolyl-tRNA synthetase [Rhodococcus erythropolis PR4]
          Length = 581

 Score = 45.4 bits (106), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 61/143 (42%), Gaps = 22/143 (15%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           +EI  P +L +  ++ S  W  Y  N+F +K  D    D        M  P H  +F   
Sbjct: 69  QEILLPALLPRDPYEASNRWTEYGPNLFRLK--DRKGNDY-------MLGPTHEELFALT 119

Query: 352 LK----SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
           +K    SY++ PV L +  + YR+E      G++R R F   D++ F   ++   E  + 
Sbjct: 120 VKGEYNSYKDFPVTLYQVQTKYRDEER-PRAGILRGREFLMKDSYSFDLSDEGLTESYQA 178

Query: 408 HNLIISIYKDFGFEKIMVKLSTR 430
           H           +EKI  +L  +
Sbjct: 179 HR--------GAYEKIFTRLGVK 193


>gi|213963758|ref|ZP_03392008.1| alanyl-tRNA synthetase [Capnocytophaga sputigena Capno]
 gi|213953638|gb|EEB64970.1| alanyl-tRNA synthetase [Capnocytophaga sputigena Capno]
          Length = 877

 Score = 45.4 bits (106), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 62/290 (21%), Positives = 120/290 (41%), Gaps = 46/290 (15%)

Query: 34  LAKKAVAVAINGKVCDLSDPVREGSIEIITPE-------DP---------RSLAVIRHSC 77
           +  K    A NG++  + D  +E ++ I   E       DP         R +A   HS 
Sbjct: 512 VGDKGTLQAANGELIYILDTKKENNLIIHIAEHLPTELNDPFKAEVHLVAREMAEANHSA 571

Query: 78  AHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPF 136
            H++ +A++ +    V+     +  +   +DF      +SDEL ++E+ + + I    P 
Sbjct: 572 THLLHQALREVLGTHVEQKGSRVAPEALRFDFSHFAKLTSDELKEVERLVNKRIFEKIPL 631

Query: 137 LK------QYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRS 190
            +      Q      A  LF  K               + V + + G+  +LC G HV++
Sbjct: 632 QEHRNIPIQQAVESGAMALFGEK-------------YGDRVRMIQFGDSKELCGGTHVKN 678

Query: 191 TGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLA 250
           TG +  FFK++   GA   G      ++R     +  +QE  Q +  ++E+ K     + 
Sbjct: 679 TGDI-WFFKIIS-EGAVAAGIRRIEAITRGGAMQYFIEQE--QLVERIKETVKNTQDPVK 734

Query: 251 REMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVL 300
               + H+ E+ + +   HR+  ++ +     ++  +K ++ EIN  Q L
Sbjct: 735 A---ITHLQEENAAL---HRELEQLKKEQAKQLKANLKAEFTEINAIQCL 778


>gi|281344737|gb|EFB20321.1| hypothetical protein PANDA_008733 [Ailuropoda melanoleuca]
          Length = 1495

 Score = 45.4 bits (106), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 73/320 (22%), Positives = 125/320 (39%), Gaps = 58/320 (18%)

Query: 334  FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH- 392
             A++P +       +   ++S+R+LP+RL ++ +V R E        +R R F   + H 
Sbjct: 1099 IAVRPTSETVMYPAYAKWVQSHRDLPIRLNQWCNVVRWEFKHP-QPFLRTREFLWQEGHS 1157

Query: 393  VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
             F T E+   E L+I +L   +Y++     ++    T  EK  G D             L
Sbjct: 1158 AFATFEEAAEEVLQILDLYAQVYEELLAIPVVKGRKTEKEKFAGGD---------YTTTL 1208

Query: 453  DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
            +   ++S   I        G  +   FE I +D                 P      Y N
Sbjct: 1209 EVFISASGRAIQGATSHHLGQNFSKMFEIIFEDP--------------KTPGEKQFAYQN 1254

Query: 513  SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIV--TTITSSAVE 566
            S              +G   R IG+M      N+ L L P    +Q +V    IT++  E
Sbjct: 1255 S--------------WGLTTRTIGVMTMVHGDNMGLVLPPRVASVQVVVIPCGITNALSE 1300

Query: 567  YAQE--IANL------LKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKE-ASE 616
              +E  IA        L S ++ +  D R N +  +K     +K +PI +  G ++  S 
Sbjct: 1301 EDREALIAKCNDYRKRLLSVNIRVRVDLRDNYSPGWKFNHWELKGVPIRLEVGPRDMKSC 1360

Query: 617  RSIGIRRFGSTTTQKVSLLD 636
            + + +RR    T +K+++ D
Sbjct: 1361 QFVAVRR---DTGEKLTVAD 1377


>gi|225573951|ref|ZP_03782596.1| hypothetical protein RUMHYD_02045 [Blautia hydrogenotrophica DSM
           10507]
 gi|225038789|gb|EEG49035.1| hypothetical protein RUMHYD_02045 [Blautia hydrogenotrophica DSM
           10507]
          Length = 479

 Score = 45.4 bits (106), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 28/109 (25%), Positives = 56/109 (51%), Gaps = 8/109 (7%)

Query: 523 IHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITS---SAVEYAQEIANLL 575
           +H+  +G   R IG +I    +N    LP  ++P+QA++  I       +E A E+   +
Sbjct: 258 VHQTSWGMTTRMIGAIIMVHGDNSGLVLPPRIAPVQAMIIPIQQKKEGVLEKADEMMAAI 317

Query: 576 KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASE-RSIGIRR 623
           K   + ++ D  +++  +K  E  ++ IP+ I CG K+    +++ +RR
Sbjct: 318 KKAGIRVKVDDSDKSPGWKFSEQEMRGIPVRIECGPKDIENGQAVIVRR 366


>gi|205830103|sp|Q0BSD5|SYA_GRABC RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
          Length = 880

 Score = 45.4 bits (106), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 65/146 (44%), Gaps = 12/146 (8%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPI-IEDGFYYDFDKEQPFSSD 117
           +E++     RS     HS  H++ EA++          G +   D   +D  +  P + D
Sbjct: 549 VEVVVDHQRRSAIRAHHSATHLLHEALRRRLGTHVAQKGSLNAPDRLRFDVSQPTPITRD 608

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEK-----ARELFESKKEAYKVEILE-SIPAKENV 171
           +LA +E ++  +I ++SP   + ++ E+     A  LF  +K   +V ++    P +E  
Sbjct: 609 DLAVVEAEVNALIRQNSPVNTRLMTPEQAVAEGAMALF-GEKYGDEVRVVSMGAPVEEGK 667

Query: 172 TLYRQGEWFDLCRGPHVRSTGQVKKF 197
             Y      +LC G HV  TG +  F
Sbjct: 668 PAYS----IELCGGTHVGRTGDIGLF 689


>gi|126739185|ref|ZP_01754879.1| prolyl-tRNA synthetase [Roseobacter sp. SK209-2-6]
 gi|126719802|gb|EBA16510.1| prolyl-tRNA synthetase [Roseobacter sp. SK209-2-6]
          Length = 451

 Score = 45.4 bits (106), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 40/183 (21%), Positives = 77/183 (42%), Gaps = 11/183 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  +G+  W   G+K+ + + + +   +++  +  +  P +    LW++SG +D Y  
Sbjct: 32  IKQSSAGIYSWLPLGFKVLKKIETIVHDEQMRAGHIPMLMPTLQSADLWKESGRYDDYGE 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  +       +  R     P N      +F   + SY++LP+ L      +R+E    
Sbjct: 92  EMLRIND-----RHGRDMLYGPTNEELITDIFRGHVSSYKDLPLTLYHIQWKFRDEIRPR 146

Query: 377 LHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
             G+MR R F   D + F  TKE   +   +     +  Y+  G + I ++    P   +
Sbjct: 147 F-GVMRGREFYMKDGYNFDLTKEDALHAYNRHLVTYLRSYERMGLQAIPMRADGGP---I 202

Query: 436 GSD 438
           G D
Sbjct: 203 GGD 205


>gi|115968862|ref|XP_001175779.1| PREDICTED: similar to mitochondrial ribosomal protein L39
           [Strongylocentrotus purpuratus]
          Length = 254

 Score = 45.4 bits (106), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 45/183 (24%), Positives = 84/183 (45%), Gaps = 19/183 (10%)

Query: 24  SDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPEDPRSLAVIR---HSCAH 79
           S ++   + +  K++    +NG+   +  P+ E   + +IT +D       +    SC+ 
Sbjct: 12  SLLSRHFNETYMKRSAIALVNGQPWHMLQPLTEDCELRLITMKDDEPTEANKAFWRSCSL 71

Query: 80  IMAEAVQSIWPE------VQVAIGPIIEDGFYYDFDKEQPF----SSDELAQIEKKMQEI 129
           +    +QS +        V+ A  P+ +  F YD +   PF    S +EL  + +   E+
Sbjct: 72  MAGAILQSAFKTDVYIQPVRAADIPVSQGCFAYDVNL--PFQWEPSQEELTSLSRLSYEL 129

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
             +  PF +  +    A E+F  K   YKV  L S+ A + + L+R G++ D  +GP V 
Sbjct: 130 AEKKLPFERIEVRPSVAMEIF--KDNEYKVAELNSMDA-DRLVLFRLGQFIDTSQGPLVA 186

Query: 190 STG 192
           ++G
Sbjct: 187 NSG 189


>gi|291535914|emb|CBL09026.1| prolyl-tRNA synthetase, family II [Roseburia intestinalis M50/1]
          Length = 567

 Score = 45.4 bits (106), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 64/138 (46%), Gaps = 7/138 (5%)

Query: 288 KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
           K D +E++ P V+   LW++SG ++S    +        T ++     L   +    V +
Sbjct: 63  KLDGQEVSFPVVMPASLWEESGRYESVGEELLRF-----TDRNNAKMVLGMTHEEAAVHL 117

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-K 406
                KSY + P  + +  + +R+E      GL+RVR FT  DA+ F T ++  N+   K
Sbjct: 118 VREYAKSYNKYPFMIYQIQTKFRDEARPRA-GLIRVREFTMKDAYSFHTSQEDLNQYYEK 176

Query: 407 IHNLIISIYKDFGFEKIM 424
            H     I++  G  +++
Sbjct: 177 CHKAYERIFERAGIPEVV 194


>gi|238926838|ref|ZP_04658598.1| phosphoribulokinase/uridine kinase [Selenomonas flueggei ATCC
           43531]
 gi|238885370|gb|EEQ49008.1| phosphoribulokinase/uridine kinase [Selenomonas flueggei ATCC
           43531]
          Length = 540

 Score = 45.4 bits (106), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 41/186 (22%), Positives = 85/186 (45%), Gaps = 3/186 (1%)

Query: 26  VAESISRSLAKKAVAVAINGKVCDL-SDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEA 84
           +A+  +++ +   VA  ING+V D+ S+   +  I  I         + + S   +   A
Sbjct: 8   LAQEEAQNYSSPIVAAKINGEVRDIQSEYNHDDEISFIELNTALGWRIYQRSVLFLFIVA 67

Query: 85  VQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSH 143
           + ++  E +V     +  G Y +     Q  +   +  IE++M+ +IA + P LK  +  
Sbjct: 68  LSNMNKEAEVVAKFTVNKGLYCEVKIPGQSINLRFIQDIEQEMRGMIANNVPILKHGIPR 127

Query: 144 EKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKV 203
           ++A ELF+++    K  ++ S+P    +++Y    + D   G  +  T  + +F   M+ 
Sbjct: 128 QEAIELFQTRGNRGKAALIASLP-HPMISIYTCCNYPDYLYGAMLPETKLLGQFALDMEQ 186

Query: 204 AGAYWR 209
           +G   R
Sbjct: 187 SGVLIR 192


>gi|118486938|gb|ABK95302.1| unknown [Populus trichocarpa]
          Length = 498

 Score = 45.4 bits (106), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 71/303 (23%), Positives = 119/303 (39%), Gaps = 55/303 (18%)

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV- 393
           A++P +       F+  ++ +R+LP++L ++ +V R E S      +R R F   + H  
Sbjct: 118 AIRPTSETVMYPYFSKWIRGHRDLPLKLNQWCNVVRWEFSNPTP-FIRSREFLWQEGHTA 176

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
           F TK++   E L+I  L   IY++F                         A  I+KG   
Sbjct: 177 FATKQEADEEVLQILELYRRIYEEFL------------------------AIPIIKG--- 209

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF-NAFYVN 512
             K S  ++         G  Y    E  + +  GR  Q  T      L   F   F +N
Sbjct: 210 --KKSEMEKF-------AGGLYTTSVEAFIPNT-GRGIQGATSHC---LGQNFAKMFEIN 256

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMI---ENFKG-NLPLWLSPIQAIVTTI------TS 562
             +EK    M  +  +    R IG+M+    + KG  LP  +S +Q IV  +      T 
Sbjct: 257 FENEKGEKGMAWQNSWAYSTRTIGVMVMVHGDDKGLVLPPKVSSVQVIVVPVPFKDANTQ 316

Query: 563 SAVEYAQEIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSI-G 620
              +      + L    +  E D+R N +  +K     +K +P+ I  G K+ +   +  
Sbjct: 317 GIFDACAATVDTLCEAGIRAEADYRENYSPGWKYSHWEMKGVPLRIEIGPKDLANNQVRA 376

Query: 621 IRR 623
           +RR
Sbjct: 377 VRR 379


>gi|94968092|ref|YP_590140.1| prolyl-tRNA synthetase [Candidatus Koribacter versatilis Ellin345]
 gi|122986393|sp|Q1IST4|SYP_ACIBL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|94550142|gb|ABF40066.1| prolyl-tRNA synthetase [Candidatus Koribacter versatilis Ellin345]
          Length = 587

 Score = 45.4 bits (106), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 38/162 (23%), Positives = 71/162 (43%), Gaps = 23/162 (14%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQV 299
           ++E   H+ L R   +  +A   +G+  +   G +    +I  +R ++    +E   P +
Sbjct: 18  DAEVASHKFLVRAGYIRQLA---AGIYSYLFLGNRSMNKIIGIVREEMDKIGQEYYLPAL 74

Query: 300 LDQHLWQQSGHWDSYRANMFAVK-------CADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
             + +W+ SG W     NMF +K       C   T +++ T             +    L
Sbjct: 75  NPREIWEASGRWAVMGDNMFRLKDRKGAELCLGMTHEEIMT------------EIARKEL 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           +SY++LP    +  + +R+EP     GL+RVR F   D++ F
Sbjct: 123 RSYKQLPQIWYQIQTKFRDEPR-PRSGLLRVRQFIMKDSYSF 163


>gi|315185841|gb|EFU19606.1| prolyl-tRNA synthetase [Spirochaeta thermophila DSM 6578]
          Length = 589

 Score = 45.4 bits (106), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 7/134 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           G G+  +   G ++F  L   +  ++K    +E+  P V    LW++SG       ++  
Sbjct: 60  GQGLYSFLPLGLRVFYKLKRLIAGEMKRLGGQEVLVPLVNPMELWERSGRDLLVGGDL-- 117

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           VK +D   +  R   + P +    V +    ++SYR LPV L +F + YR+E    + GL
Sbjct: 118 VKFSD---RAGRQMVISPTHEEAMVELLRQSMRSYRMLPVFLYQFQTKYRDEERVRI-GL 173

Query: 381 MRVRGFTQDDAHVF 394
           +R R F   D + F
Sbjct: 174 LRSREFIMKDGYSF 187


>gi|295109529|emb|CBL23482.1| prolyl-tRNA synthetase, family I [Ruminococcus obeum A2-162]
          Length = 477

 Score = 45.4 bits (106), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 69/150 (46%), Gaps = 13/150 (8%)

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV-MIHRAVFGS 530
           GA      E ++ D  G+  Q GT     N    F   +   +++K + +  +H+  +G 
Sbjct: 209 GAVATYTIESLMHD--GKALQSGT---SHNFGDGFAKAFGIQYTDKDNTLKYVHQTSWGM 263

Query: 531 IERFIGIMI----ENFKGNLPLWLSPIQAIVTTITS---SAVEYAQEIANLLKSHHLSIE 583
             R IG +I    +N    LP  ++P QA++  I       +E A E+   LK+  + ++
Sbjct: 264 TTRMIGAIIMVHGDNSGLVLPPRIAPTQAVIIPIQQRKEGVLEKADELFAALKAAGIRVK 323

Query: 584 TDFRNETINYKIREHSIKKIPIIIICGDKE 613
            D  + +  +K  E  ++ IP+ I CG K+
Sbjct: 324 VDDTDRSPGFKFAEQEMRGIPVRIECGPKD 353


>gi|331087229|ref|ZP_08336299.1| prolyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA]
 gi|330408915|gb|EGG88376.1| prolyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA]
          Length = 479

 Score = 45.4 bits (106), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 40/161 (24%), Positives = 75/161 (46%), Gaps = 14/161 (8%)

Query: 474 FYGPKFEYILKDAI--GRDWQCGTIQVDFNLPSRF-NAFYVNSHSEKCHPVMIHRAVFGS 530
           F G +  Y ++  +  G+  Q GT     N    F  AF +    ++     +H+  +G 
Sbjct: 209 FAGAEATYTIESLMHDGKALQSGT---SHNFGDGFAKAFGIQYTDKENKLQYVHQTSWGM 265

Query: 531 IERFIGIMI----ENFKGNLPLWLSPIQAIVTTITS---SAVEYAQEIANLLKSHHLSIE 583
             R IG +I    +N    LP  ++P+Q +V  I       ++ A E+  +LK   LS++
Sbjct: 266 TTRMIGAIIMVHGDNSGLVLPPRIAPVQVMVIPIQQKKDGVLDKAYEVKEVLKKAGLSVK 325

Query: 584 TDFRNETINYKIREHSIKKIPIIIICGDKE-ASERSIGIRR 623
            D  +++  +K  E  ++ IP+ I  G K+  +  ++ +RR
Sbjct: 326 VDDSDKSPGWKFSEQEMRGIPVRIELGPKDIEAGHAVVVRR 366


>gi|291538408|emb|CBL11519.1| prolyl-tRNA synthetase, family II [Roseburia intestinalis XB6B4]
          Length = 567

 Score = 45.4 bits (106), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 64/138 (46%), Gaps = 7/138 (5%)

Query: 288 KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
           K D +E++ P V+   LW++SG ++S    +        T ++     L   +    V +
Sbjct: 63  KLDGQEVSFPVVMPASLWEESGRYESVGEELLRF-----TDRNNAKMVLGMTHEEAAVHL 117

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-K 406
                KSY + P  + +  + +R+E      GL+RVR FT  DA+ F T ++  N+   K
Sbjct: 118 VREYAKSYNKYPFMIYQIQTKFRDEARPRA-GLIRVREFTMKDAYSFHTSQEDLNQYYEK 176

Query: 407 IHNLIISIYKDFGFEKIM 424
            H     I++  G  +++
Sbjct: 177 CHKAYERIFERAGIPEVV 194


>gi|296816643|ref|XP_002848658.1| prolyl-tRNA synthetase [Arthroderma otae CBS 113480]
 gi|238839111|gb|EEQ28773.1| prolyl-tRNA synthetase [Arthroderma otae CBS 113480]
          Length = 589

 Score = 45.4 bits (106), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 55/119 (46%), Gaps = 10/119 (8%)

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SG      + +F +     T        L P +      V +  +KSYR+LP+R+ +
Sbjct: 78  WKKSGRLHEGDSEVFRLLDRKKT-----PLLLAPTHEEEITTVISSLVKSYRDLPLRVYQ 132

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
               YR+EP    HGL+R R F   D + F + E    E +  +N +   Y +  FE++
Sbjct: 133 ISRKYRDEPR-PRHGLLRGREFVMKDLYTFDSTEA---EAINTYNTVKDAYMEL-FEEL 186


>gi|153812523|ref|ZP_01965191.1| hypothetical protein RUMOBE_02922 [Ruminococcus obeum ATCC 29174]
 gi|149831448|gb|EDM86536.1| hypothetical protein RUMOBE_02922 [Ruminococcus obeum ATCC 29174]
          Length = 477

 Score = 45.4 bits (106), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 69/150 (46%), Gaps = 13/150 (8%)

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV-MIHRAVFGS 530
           GA      E ++ D  G+  Q GT     N    F   +   +++K + +  +H+  +G 
Sbjct: 209 GAVATYTIESLMHD--GKALQSGT---SHNFGDGFAKAFGIQYTDKDNTLKYVHQTSWGM 263

Query: 531 IERFIGIMI----ENFKGNLPLWLSPIQAIVTTITS---SAVEYAQEIANLLKSHHLSIE 583
             R IG +I    +N    LP  ++P QA++  I       +E A E+   LK+  + ++
Sbjct: 264 TTRMIGAIIMVHGDNSGLVLPPRIAPTQAVIIPIQQRKEGVLEKADELFAALKAAGIRVK 323

Query: 584 TDFRNETINYKIREHSIKKIPIIIICGDKE 613
            D  + +  +K  E  ++ IP+ I CG K+
Sbjct: 324 VDDTDRSPGFKFAEQEMRGIPVRIECGPKD 353


>gi|114328034|ref|YP_745190.1| alanyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1]
 gi|114316208|gb|ABI62268.1| alanyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1]
          Length = 945

 Score = 45.4 bits (106), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 65/146 (44%), Gaps = 12/146 (8%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPI-IEDGFYYDFDKEQPFSSD 117
           +E++     RS     HS  H++ EA++          G +   D   +D  +  P + D
Sbjct: 614 VEVVVDHQRRSAIRAHHSATHLLHEALRRRLGTHVAQKGSLNAPDRLRFDVSQPTPITRD 673

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEK-----ARELFESKKEAYKVEILE-SIPAKENV 171
           +LA +E ++  +I ++SP   + ++ E+     A  LF  +K   +V ++    P +E  
Sbjct: 674 DLAVVEAEVNALIRQNSPVNTRLMTPEQAVAEGAMALF-GEKYGDEVRVVSMGAPVEEGK 732

Query: 172 TLYRQGEWFDLCRGPHVRSTGQVKKF 197
             Y      +LC G HV  TG +  F
Sbjct: 733 PAYS----IELCGGTHVGRTGDIGLF 754


>gi|28948883|pdb|1NJ1|A Chain A, Crystal Structure Of Prolyl-Trna Synthetase From
           Methanothermobacter Thermautotrophicus Bound To Cysteine
           Sulfamoyl Adenylate
 gi|28948884|pdb|1NJ2|A Chain A, Crystal Structure Of Prolyl-Trna Synthetase From
           Methanothermobacter Thermautotrophicus
 gi|28948885|pdb|1NJ5|A Chain A, Crystal Structure Of Prolyl-Trna Synthetase From
           Methanothermobacter Thermautotrophicus Bound To Proline
           Sulfamoyl Adenylate
 gi|28948886|pdb|1NJ6|A Chain A, Crystal Structure Of Prolyl-Trna Synthetase From
           Methanothermobacter Thermautotrophicus Bound To Alanine
           Sulfamoyl Adenylate
          Length = 501

 Score = 45.4 bits (106), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 78/384 (20%), Positives = 152/384 (39%), Gaps = 61/384 (15%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVL-DQHLWQQSGHWDSYRANMFAVK 322
           G+  W   G+ I +  +  +RR +  D+EE+  P ++ +  L +++ H   +   ++ V 
Sbjct: 62  GMHVWMPHGFMIRKNTLKILRRILDRDHEEVLFPLLVPEDELAKEAIHVKGFEDEVYWVT 121

Query: 323 CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMR 382
               + K  R  AL+P +      +F   ++S+ +LP+R  +  + +R E +     L+R
Sbjct: 122 HGGLS-KLQRKLALRPTSETVMYPMFALWVRSHTDLPMRFYQVVNTFRYE-TKHTRPLIR 179

Query: 383 VRGFTQ-DDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK--LSTRPEKRVGSDA 439
           VR  T   +AH   T     +E  +     + IYK+F F  + +   ++ RP        
Sbjct: 180 VREITTFKEAH---TIHATASEAEEQVERAVEIYKEF-FNSLGIPYLITRRPP------- 228

Query: 440 LWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVD 499
            WD                             G+ Y   F+ ++ D  G+  Q GT+   
Sbjct: 229 -WDKF--------------------------PGSEYTVAFDTLMPD--GKTLQIGTVH-- 257

Query: 500 FNLPSRF-NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP------ 552
            NL   F   F +   + +     +H+  +G  +R I  +I        L L P      
Sbjct: 258 -NLGQTFARTFEIKFETPEGDHEYVHQTCYGLSDRVIASVIAIHGDESGLCLPPDVAAHQ 316

Query: 553 ---IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIIC 609
              +  I        +E  +E+ + L++    +  D R+     K  E  ++ +P+ +  
Sbjct: 317 VVIVPIIFKKAAEEVMEACRELRSRLEAAGFRVHLDDRDIRAGRKYYEWEMRGVPLRVEI 376

Query: 610 GDKEASERSIGIRRFGSTTTQKVS 633
           G ++  + +  I R    T +KV+
Sbjct: 377 GPRDLEKGAAVISR--RDTGEKVT 398


>gi|163737417|ref|ZP_02144834.1| prolyl-tRNA synthetase [Phaeobacter gallaeciensis BS107]
 gi|161388943|gb|EDQ13295.1| prolyl-tRNA synthetase [Phaeobacter gallaeciensis BS107]
          Length = 451

 Score = 45.4 bits (106), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 40/183 (21%), Positives = 78/183 (42%), Gaps = 11/183 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  +G+  W   G+K+ + + + +   +++  +  +  P +    LW++SG +D Y  
Sbjct: 32  IKQSAAGIYSWLPLGFKVLKKIETIVHEEQMRAGHIPMLMPTLQSADLWKESGRYDDYGQ 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  +     + +  R     P N      +F   + SY++LP+ L      +R+E    
Sbjct: 92  EMLRI-----SDRHGRDMLYGPTNEELITDIFRSHVGSYKDLPLTLYHIQWKFRDEIRPR 146

Query: 377 LHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
             G+MR R F   D + F  TKE   +   +     +  Y+  G + I ++    P   +
Sbjct: 147 F-GVMRGREFYMKDGYNFDLTKEDALHAYNRHLVSYLRSYERMGLQAIPMRADGGP---I 202

Query: 436 GSD 438
           G D
Sbjct: 203 GGD 205


>gi|163740902|ref|ZP_02148295.1| prolyl-tRNA synthetase [Phaeobacter gallaeciensis 2.10]
 gi|161385893|gb|EDQ10269.1| prolyl-tRNA synthetase [Phaeobacter gallaeciensis 2.10]
          Length = 451

 Score = 45.4 bits (106), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 41/183 (22%), Positives = 81/183 (44%), Gaps = 11/183 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  +G+  W   G+K+ + + + +   +++  +  +  P +    LW++SG +D Y  
Sbjct: 32  IKQSAAGIYSWLPLGFKVLKKIETIVHEEQMRAGHIPMLMPTLQSADLWKESGRYDDYGQ 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  ++ +D   +D+      P N      +F   + SY++LP+ L      +R+E    
Sbjct: 92  EM--LRISDRHGRDM---LYGPTNEELITDIFRSHVGSYKDLPLTLYHIQWKFRDEIRPR 146

Query: 377 LHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
             G+MR R F   D + F  TKE   +   +     +  Y+  G + I ++    P   +
Sbjct: 147 F-GVMRGREFYMKDGYNFDLTKEDALHAYNRHLVSYLRSYERMGLQAIPMRADGGP---I 202

Query: 436 GSD 438
           G D
Sbjct: 203 GGD 205


>gi|212535538|ref|XP_002147925.1| prolyl-tRNA synthetase [Penicillium marneffei ATCC 18224]
 gi|210070324|gb|EEA24414.1| prolyl-tRNA synthetase [Penicillium marneffei ATCC 18224]
          Length = 594

 Score = 45.1 bits (105), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 81/376 (21%), Positives = 147/376 (39%), Gaps = 61/376 (16%)

Query: 261 DGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANM 318
           D SG        + +++T+ ++   KIK       + P  + + + Q +  H + + A +
Sbjct: 108 DVSGCFILKPSSYFVWETIQNWFNDKIKKMGVRNCSFPLFVSEDVLQREKDHIEGFAAEV 167

Query: 319 FAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLH 378
             V  A  T  + R  A++P +       +   ++S+R+LP++L ++ SV R E      
Sbjct: 168 AWVTHAGSTPLE-RKIAIRPTSETVMYPYYAKWIRSHRDLPLKLNQWNSVVRWE-FKHPQ 225

Query: 379 GLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGS 437
             +R R F   + H    T+E    E ++I +    +Y+D     ++    T  EK    
Sbjct: 226 PFLRTREFLWQEGHTAHLTEEGAAEEVMQILDHYAHVYEDLLAVPVVRGKKTEKEKFA-- 283

Query: 438 DALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ 497
                                             G +Y    E  +  A GR  Q GT  
Sbjct: 284 ----------------------------------GGYYTTTVEGYIP-ATGRGIQGGTSH 308

Query: 498 -VDFNLPSRFNAFYVNSHS---EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP- 552
            +  N    F     + ++   EK   + + +  +G   R IG+M+     N  L L P 
Sbjct: 309 CLGQNFSKMFGITVEDPNAKPDEKGASLHVWQNSWGLSTRTIGVMVMIHSDNKGLVLPPR 368

Query: 553 ---IQAIVT----TITSSAVEYAQ------EIANLLKSHHLSIETDFRNE-TINYKIREH 598
              IQ I+     T +++  E AQ      E+A+ L +  +  ETD R+  +  YK  + 
Sbjct: 369 VAEIQTIIVPVGITKSTTDEERAQIYNDCAELASKLSAVGVRAETDLRDGYSPGYKFNDW 428

Query: 599 SIKKIPIIIICGDKEA 614
            ++ +P+ +  G  EA
Sbjct: 429 ELRGVPLRLEFGPGEA 444


>gi|152973866|ref|YP_001373383.1| seryl-tRNA synthetase [Bacillus cereus subsp. cytotoxis NVH 391-98]
 gi|189083557|sp|A7GJT0|SYS_BACCN RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|152022618|gb|ABS20388.1| seryl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98]
          Length = 424

 Score = 45.1 bits (105), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 35/153 (22%), Positives = 67/153 (43%), Gaps = 13/153 (8%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDD--YEEINTPQVLDQHLWQQSGHWDSYRANMF 319
           GS  +F+   G ++ + LIS+M     ++  YEE+  P ++++     +G    +  + F
Sbjct: 160 GSRFVFYKGAGARLERALISFMLDLHTEEHGYEEVLPPYMVNRASMTGTGQLPKFEEDAF 219

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS--- 376
            ++  D        + L P        +    + S  +LP+R A F S +R+E   +   
Sbjct: 220 LIESED--------YFLIPTAEVPVTNMHRDEILSAEQLPIRYAAFSSCFRSEAGSAGRD 271

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
             GL+R   F + +   F   E+ + E  K+ N
Sbjct: 272 TRGLIRQHQFNKVELVKFVKPEESYEELEKLTN 304


>gi|325280523|ref|YP_004253065.1| alanyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712]
 gi|324312332|gb|ADY32885.1| alanyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712]
          Length = 877

 Score = 45.1 bits (105), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 63/138 (45%), Gaps = 9/138 (6%)

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIED-GFYYDFDKEQPFSSDELAQIE 123
           E  R L    HS  H++  A++ +  +     G  + D    +DF   Q  + +ELA++ 
Sbjct: 553 EHKRVLTANNHSATHLLDYALRKVLGKHVEQKGSYVSDEHLRFDFSHFQKVTDEELAEVA 612

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
             +  +I  + P        E+ R +  +K +A     +      + V + + GE  +LC
Sbjct: 613 AIVNRLIRMNIPL-------EEHRSVPMAKAQAMGALAIFGEKYGDLVRVIKYGESVELC 665

Query: 184 RGPHVRSTGQVKKFFKLM 201
            G HV +TGQ+  FFK++
Sbjct: 666 GGTHVPATGQI-GFFKIL 682


>gi|15616855|ref|NP_240068.1| prolyl-tRNA synthetase [Buchnera aphidicola str. APS (Acyrthosiphon
           pisum)]
 gi|11134948|sp|P57333|SYP_BUCAI RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|25293219|pir||B84958 proline-tRNA ligase (EC 6.1.1.15) [imported] - Buchnera sp.
           (strain APS)
 gi|10038919|dbj|BAB12954.1| prolyl-tRNA synthetase [Buchnera aphidicola str. APS (Acyrthosiphon
           pisum)]
          Length = 572

 Score = 45.1 bits (105), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 39/171 (22%), Positives = 76/171 (44%), Gaps = 8/171 (4%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  SG+  W   G ++ + + + +  ++ K +  EI  P +  ++LW++S      R 
Sbjct: 32  IRKTSSGLYVWLPTGMRVLKKIKNIITTEMEKINALEILMPIIQPEYLWKESR-----RL 86

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
           N++  +      +    F L P N           + SY++LP+ + +  + +R+E    
Sbjct: 87  NLYGEELLRFLDRRKNQFILGPTNEEVVTNFIGSEIHSYKQLPLTVYQIQTKFRDEIRPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMF-NECLKIHNLIISIYKDFGFEKIMVK 426
             G++R R FT  DA+ F   +    N   K ++  I+I+K        VK
Sbjct: 147 F-GIIRTREFTMKDAYSFHINQSCLENTYNKFYDSYINIFKKMNLNFCAVK 196


>gi|224023759|ref|ZP_03642125.1| hypothetical protein BACCOPRO_00475 [Bacteroides coprophilus DSM
           18228]
 gi|224016981|gb|EEF74993.1| hypothetical protein BACCOPRO_00475 [Bacteroides coprophilus DSM
           18228]
          Length = 153

 Score = 45.1 bits (105), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 33/126 (26%), Positives = 60/126 (47%), Gaps = 13/126 (10%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDS 134
           H+C HI+   + +++   +     I       DF   Q  + +E+ QIE K+ E+IAR  
Sbjct: 19  HTCEHIVNRTMVNLFGCGRAVSAHIERKKSKLDFALSQAPTDEEIEQIEAKVNEVIARHL 78

Query: 135 PFLKQYLSHEKARELFESKKEAYKVEILESIP--AKENVTLYRQGEWFD-LCRGPHVRST 191
               +++S ++A   F+ K+          +P  A + V +   G++ D LC G HV +T
Sbjct: 79  DVTVKFISQQEAAGQFDLKR----------LPEGASDTVRVVSVGDYDDCLCIGTHVANT 128

Query: 192 GQVKKF 197
            ++  F
Sbjct: 129 SEIGTF 134


>gi|325663708|ref|ZP_08152112.1| prolyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA]
 gi|325470201|gb|EGC73434.1| prolyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA]
          Length = 492

 Score = 45.1 bits (105), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 40/161 (24%), Positives = 75/161 (46%), Gaps = 14/161 (8%)

Query: 474 FYGPKFEYILKDAI--GRDWQCGTIQVDFNLPSRF-NAFYVNSHSEKCHPVMIHRAVFGS 530
           F G +  Y ++  +  G+  Q GT     N    F  AF +    ++     +H+  +G 
Sbjct: 222 FAGAEATYTIESLMHDGKALQSGT---SHNFGDGFAKAFGIQYTDKENKLQYVHQTSWGM 278

Query: 531 IERFIGIMI----ENFKGNLPLWLSPIQAIVTTITS---SAVEYAQEIANLLKSHHLSIE 583
             R IG +I    +N    LP  ++P+Q +V  I       ++ A E+  +LK   LS++
Sbjct: 279 TTRMIGAIIMVHGDNSGLVLPPRIAPVQVMVIPIQQKKDGVLDKAYEVKEVLKKAGLSVK 338

Query: 584 TDFRNETINYKIREHSIKKIPIIIICGDKE-ASERSIGIRR 623
            D  +++  +K  E  ++ IP+ I  G K+  +  ++ +RR
Sbjct: 339 VDDSDKSPGWKFSEQEMRGIPVRIELGPKDIEAGHAVVVRR 379


>gi|307178487|gb|EFN67176.1| Bifunctional aminoacyl-tRNA synthetase [Camponotus floridanus]
          Length = 1504

 Score = 45.1 bits (105), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 78/347 (22%), Positives = 132/347 (38%), Gaps = 62/347 (17%)

Query: 319  FAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLH 378
            +  KC +  + +    A++P +       +   L+S  ELP+RL ++ +V R E      
Sbjct: 1089 WVTKCGESDLAE--PVAIRPTSETVMYPAYAKWLRSDTELPLRLNQWNNVVRWEFKDP-K 1145

Query: 379  GLMRVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGS 437
              +R R F   + H  F TK +   E L I ++   +Y+D     ++    T  EK  G 
Sbjct: 1146 PFLRTREFLWQEGHSAFATKAEADEEVLIILDIYAKVYEDLLAVPVIKGRKTEKEKFPGG 1205

Query: 438  DALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI- 496
            D                                    Y    E  +  + GR  Q  T  
Sbjct: 1206 D------------------------------------YTTTVEAFISTS-GRAIQGATSH 1228

Query: 497  QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI---ENFKG-NLPLWLSP 552
             +  N    FN   V   +E      +++  +G   R IG+MI    + KG  LP  ++ 
Sbjct: 1229 HLGQNFSKMFN-IQVEGIAEGDEKTFVYQNSWGLTTRTIGVMIMVHGDDKGLVLPPCIAS 1287

Query: 553  IQAIV---------TTITSSAV--EYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSI 600
            IQ IV         +TI    +  E  + +  L K     ++ DFRN  T  +K     +
Sbjct: 1288 IQGIVIPCGITANMSTIEKELLQSECVKLVDELSKVSKFRVKGDFRNNRTPGWKFNHWEL 1347

Query: 601  KKIPIIIICGDKEASERSIG-IRR--FGSTTTQKVSLLDAIPILTKE 644
            K +P+ I  G K+  +  +  +RR     TT  + ++  ++  L K+
Sbjct: 1348 KGVPVRIELGPKDMKKNQVTFVRRDNLQRTTVNRDTVAASLDCLLKD 1394


>gi|281342071|gb|EFB17655.1| hypothetical protein PANDA_008798 [Ailuropoda melanoleuca]
          Length = 282

 Score = 45.1 bits (105), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 88/192 (45%), Gaps = 24/192 (12%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIR---HS 76
           +T  + A  +S    +K++   ++G+  D+  P+ +   IE +T +D     V +    S
Sbjct: 61  STPYNCAMHLSEWYCRKSILALVDGQPWDMYKPLTKSCEIEFLTFKDRDPGEVNKAYWRS 120

Query: 77  CAHIMAEAVQSIWPE------VQVAIGPIIEDGFYYD------FDKEQPFSSDELAQIEK 124
           CA +M   ++  + +      V+    P+I   F YD       D+  P + + L  + K
Sbjct: 121 CAMMMGCVIERAFKDEYVVSLVRAPEVPVICGAFCYDVVLDKRLDEWMP-TKENLRSLTK 179

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN----VTLYRQGEWF 180
               +I +D PF    +  + A E+F+  K  YK++ +E   A +N    V L+R G++ 
Sbjct: 180 DAHSLIYKDLPFETLEVEAKVALEIFQRNK--YKMDFVEE-KASQNPERIVKLHRFGDFI 236

Query: 181 DLCRGPHVRSTG 192
           D+  GP +  T 
Sbjct: 237 DVSEGPVIPRTS 248


>gi|256851919|ref|ZP_05557307.1| seryl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260661820|ref|ZP_05862730.1| seryl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
 gi|282931840|ref|ZP_06337321.1| serine--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|297205544|ref|ZP_06922940.1| serine--tRNA ligase [Lactobacillus jensenii JV-V16]
 gi|256615877|gb|EEU21066.1| seryl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260547289|gb|EEX23269.1| seryl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
 gi|281304003|gb|EFA96124.1| serine--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|297150122|gb|EFH30419.1| serine--tRNA ligase [Lactobacillus jensenii JV-V16]
          Length = 435

 Score = 45.1 bits (105), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 39/180 (21%), Positives = 73/180 (40%), Gaps = 7/180 (3%)

Query: 256 FHIAEDGSGVIFWHRKGWKIFQTLISY---MRRKIKDDYEEINTPQVLDQHLWQQSGHWD 312
           F  A   SG  F + KG         Y   +    K+ Y E+  P +++    Q +G + 
Sbjct: 152 FDTAAKVSGARFVYYKGAGALLERAVYNFFLDENTKEGYTEVIPPYLVNDDSMQGTGQFP 211

Query: 313 SYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE 372
            +  +++ +   DD  K L    +     P  V  F   +   ++LP+ +      +R+E
Sbjct: 212 KFTEDVYTIVDNDDPDKPLNLTLIPTAEVP-LVNYFRGEIVDGKKLPINVTALTPAFRSE 270

Query: 373 PSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
              +     GL+R+  F + +    C  E+ +NE  K+ +    + +  G    +V LST
Sbjct: 271 AGSAGRDTRGLIRMHQFNKVEMVKVCKPEESWNELDKLTHNAEHLLQKLGLPYHVVALST 330


>gi|146304364|ref|YP_001191680.1| Ser-tRNA(Thr) hydrolase [Metallosphaera sedula DSM 5348]
 gi|145702614|gb|ABP95756.1| Ser-tRNA(Thr) hydrolase [Metallosphaera sedula DSM 5348]
          Length = 386

 Score = 45.1 bits (105), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 3/101 (2%)

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
            LPLWLSPI   +  +     +  ++ A  LK   + ++ D   E +  KIR   +  IP
Sbjct: 267 TLPLWLSPIHVRILKVRKE--DNVEDFAKSLKERGIRVQVDDLEEGLGNKIRRAGMDWIP 324

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
            + I G++E    ++ + R   T+ QK   +D I  + K +
Sbjct: 325 FVAIAGERELKTGNLTV-RVRETSEQKPMTVDEIERVVKSA 364


>gi|310658401|ref|YP_003936122.1| phosphoribulokinase/uridine kinase [Clostridium sticklandii DSM
           519]
 gi|308825179|emb|CBH21217.1| Phosphoribulokinase/uridine kinase [Clostridium sticklandii]
          Length = 554

 Score = 45.1 bits (105), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 35/156 (22%), Positives = 70/156 (44%), Gaps = 2/156 (1%)

Query: 43  INGKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE 101
           +N  + +LS  + E S +  I   DP        S   +   A++ + P     I   + 
Sbjct: 42  VNNNLRELSYELEEDSFVNWIDITDPDGRRTYMRSLTFLFIRALEELLPGAVTKIQHSLS 101

Query: 102 DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEI 161
           +GF+ + + E+  + D++ +IE +M+E +  +   ++  +  E+A  +++ +    K+ +
Sbjct: 102 NGFFCEVEYEEKLNVDDVQKIELRMREFVDSNEKIIRFRVPKEEAINIYKKQNREGKLNL 161

Query: 162 LESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
           L+       V LYR G   D   G  V ST  +  F
Sbjct: 162 LK-YKNTSTVHLYRCGWLEDYFYGYMVPSTAMLHTF 196


>gi|27886570|ref|NP_542984.2| 39S ribosomal protein L39, mitochondrial isoform b [Homo sapiens]
 gi|119630386|gb|EAX09981.1| mitochondrial ribosomal protein L39, isoform CRA_c [Homo sapiens]
          Length = 353

 Score = 45.1 bits (105), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 86/192 (44%), Gaps = 24/192 (12%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIR---HS 76
           +T    A  +S    +K++   ++G+  D+  P+ +   I+ +T +D     V +    S
Sbjct: 86  STPYSCAMHLSEWYCRKSILALVDGQPWDMYKPLTKSCEIKFLTFKDCDPGEVNKAYWRS 145

Query: 77  CAHIMAEAVQSIWPE------VQVAIGPIIEDGFYYD------FDKEQPFSSDELAQIEK 124
           CA +M   ++  + +      V+    P+I   F YD       D+  P + + L    K
Sbjct: 146 CAMMMGCVIERAFKDEYMVNLVRAPEVPVISGAFCYDVVLDSKLDEWMP-TKENLRSFTK 204

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN----VTLYRQGEWF 180
               +I +D PF    +  + A E+F+  K  YKV+ +E   A +N    V L+R G++ 
Sbjct: 205 DAHALIYKDLPFETLEVEAKVALEIFQHSK--YKVDFIEE-KASQNPERIVKLHRIGDFI 261

Query: 181 DLCRGPHVRSTG 192
           D+  GP +  T 
Sbjct: 262 DVSEGPLIPRTS 273


>gi|117928726|ref|YP_873277.1| prolyl-tRNA synthetase [Acidothermus cellulolyticus 11B]
 gi|152074742|sp|A0LV31|SYP_ACIC1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|117649189|gb|ABK53291.1| prolyl-tRNA synthetase [Acidothermus cellulolyticus 11B]
          Length = 583

 Score = 45.1 bits (105), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 36/156 (23%), Positives = 74/156 (47%), Gaps = 10/156 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQ 298
           ++E   HR L R   +  +A    G+  W   G+ + + +   +R++ +    +E++ P 
Sbjct: 19  DAEVPSHRLLVRAGYIRRVA---PGIYSWLPLGYAVLRKIEEIVRQEMLHIGGQEVHFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++ + +++ SG W+ Y   +F +K  D    D   + L P +      +      SY++ 
Sbjct: 76  LIPREIYEASGRWNEYGDTLFRLK--DRKGAD---YLLGPTHEELFTLLVKGEYSSYKDY 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           PV L +  + YR+E +    G++R R F   D++ F
Sbjct: 131 PVILFQIQTKYRDE-ARPRAGILRGREFVMKDSYSF 165


>gi|157273379|gb|ABV27278.1| alanyl-tRNA synthetase [Candidatus Chloracidobacterium
           thermophilum]
          Length = 880

 Score = 45.1 bits (105), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 64/138 (46%), Gaps = 18/138 (13%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D R   ++ HS  H++  A++ +    V+ A   +  D   +DF      S+DE+A++E+
Sbjct: 554 DRRRRTMLNHSATHLLHAALREVLGAHVKQAGSEVAPDKLRFDFTHYAALSADEIAEVER 613

Query: 125 KMQEIIARDSPFLKQYLSHE-----KARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +   I R++P  K+ +  +      A  LF  +K    V ++E +P          G  
Sbjct: 614 LVNAQIRRNAPLAKREMPLDAAIAAGAIALF-GEKYGDVVRVVE-VP----------GFS 661

Query: 180 FDLCRGPHVRSTGQVKKF 197
            +LC G HV +TG +  F
Sbjct: 662 IELCGGTHVTATGDIGLF 679


>gi|330837065|ref|YP_004411706.1| alanyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
 gi|329748968|gb|AEC02324.1| alanyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
          Length = 598

 Score = 45.1 bits (105), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 35/137 (25%), Positives = 62/137 (45%), Gaps = 10/137 (7%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D   L    H+  H++ +A++++    V      I  +   +DF   +P + +++ Q+E 
Sbjct: 452 DHSELTTALHTATHLLHQALRTVLGTHVGQKGSNITVERLRFDFTHPEPMTKEQIQQVED 511

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF-DLC 183
            + E I R+       L+  K  E  E  ++   +   ES    E VT+Y  G +  ++C
Sbjct: 512 IVNEQIKRN-------LTVTKKTETLEEAQKEGAIAFFES-KYGELVTVYSIGNFSKEVC 563

Query: 184 RGPHVRSTGQVKKFFKL 200
            GPHV  TG +  F  L
Sbjct: 564 GGPHVTHTGDMGHFHIL 580


>gi|323498007|ref|ZP_08103016.1| prolyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
 gi|323317052|gb|EGA70054.1| prolyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
          Length = 571

 Score = 45.1 bits (105), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 38/162 (23%), Positives = 73/162 (45%), Gaps = 10/162 (6%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINT--PQVLDQHLWQQSGHWDSYRANMFA 320
           SG+  W   G ++ + + + +R++I D+   + T  P V    LW+++G     R+    
Sbjct: 37  SGLYTWLPTGLRVLRKVENIVRQEI-DNAGAVETLMPVVQPFELWEETG-----RSEKMG 90

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +    T +  R F L P       ++  + + SY++LP+ L +  + +R+E      G+
Sbjct: 91  PELLRFTDRHTRPFVLSPTAEEVITSLVRNEVSSYKQLPLNLYQIQTKFRDERRPRF-GV 149

Query: 381 MRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFE 421
           MR R F   DA+ F   K+ +      +H+     +   G E
Sbjct: 150 MRAREFCMMDAYSFDIDKDGLQKSYDAMHDAYCKAFDRMGLE 191


>gi|65317824|ref|ZP_00390783.1| COG0442: Prolyl-tRNA synthetase [Bacillus anthracis str. A2012]
          Length = 383

 Score = 45.1 bits (105), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 68/310 (21%), Positives = 119/310 (38%), Gaps = 66/310 (21%)

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH-VFCTKEQMFNECLKIHNL 410
           ++SY +LP    ++ SV R E +      +R   F   + H +  T E+   E L I NL
Sbjct: 1   MQSYNDLPKLYNQWCSVVRWEKT--TRPFLRTTEFLWQEGHTIHETAEESQAETLNILNL 58

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD--RINTGVL 468
             S  +D+    ++    T  EK  G+ A +            TI++   D   + TG  
Sbjct: 59  YASFCEDYLAIPVIKGQKTEKEKFAGAKATY------------TIESLMHDGKALQTGTS 106

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
              G  +   F+    D  G+ WQ                              +H+  +
Sbjct: 107 HNFGTNFSEAFDIKFLDRNGK-WQ-----------------------------YVHQTSW 136

Query: 529 GSIERFIGIMIENFKGN----LPLWLSPIQAIVTTIT-------SSAVEYAQEIANLLKS 577
           G   R IG +I     N    +P  ++P+Q ++  I        + A E    I  + + 
Sbjct: 137 GVSTRMIGGLIMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLAKATELQGHIQKVAR- 195

Query: 578 HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS---L 634
               ++ D  N+T  +K  E+ +K IPI +  G K+  +  + + R  +   + +S   L
Sbjct: 196 ----VKIDASNKTPGWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEKEFISMDQL 251

Query: 635 LDAIPILTKE 644
            + IP L +E
Sbjct: 252 EERIPALLEE 261


>gi|297287729|ref|XP_001105639.2| PREDICTED: 39S ribosomal protein L39, mitochondrial-like isoform 2
           [Macaca mulatta]
          Length = 360

 Score = 45.1 bits (105), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 46/192 (23%), Positives = 86/192 (44%), Gaps = 24/192 (12%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIR---HS 76
           +T    A  +S    +K++   ++G+  D+  P+ +   I+ +T +D     V +    S
Sbjct: 86  STPYSCAMHLSEWYCRKSILALVDGQPWDMYKPLTKSCEIKFLTFKDRDPGEVNKAYWRS 145

Query: 77  CAHIMAEAVQSIWPE------VQVAIGPIIEDGFYYD------FDKEQPFSSDELAQIEK 124
           CA +M   ++  + +      V+    P+I   F YD       D+  P + + L    K
Sbjct: 146 CAMMMGCVIERAFKDEYMVNLVRAPEVPVISGAFCYDVVLDSKLDEWMP-TKENLRSFTK 204

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN----VTLYRQGEWF 180
               +I +D PF    +  + A E+F+  K  YK++ +E   A +N    V L+R G++ 
Sbjct: 205 DAHALIYKDLPFETLEVEAKVALEIFQHNK--YKIDFIEE-KASQNPERIVKLHRIGDFI 261

Query: 181 DLCRGPHVRSTG 192
           D+  GP +  T 
Sbjct: 262 DVSEGPLIPRTS 273


>gi|229491433|ref|ZP_04385257.1| prolyl-tRNA synthetase [Rhodococcus erythropolis SK121]
 gi|229321718|gb|EEN87515.1| prolyl-tRNA synthetase [Rhodococcus erythropolis SK121]
          Length = 581

 Score = 45.1 bits (105), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 61/143 (42%), Gaps = 22/143 (15%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           +EI  P +L +  ++ S  W  Y  N+F +K  D    D        M  P H  +F   
Sbjct: 69  QEILLPALLPRDPYEASNRWTEYGPNLFRLK--DRKGNDY-------MLGPTHEELFALT 119

Query: 352 LK----SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
           +K    SY++ PV L +  + YR+E      G++R R F   D++ F   ++   E  + 
Sbjct: 120 VKGEYNSYKDFPVTLYQVQTKYRDEER-PRAGILRGREFLMKDSYSFDLTDEGLTESYQA 178

Query: 408 HNLIISIYKDFGFEKIMVKLSTR 430
           H           +EKI  +L  +
Sbjct: 179 HR--------GAYEKIFTRLGVK 193


>gi|295667908|ref|XP_002794503.1| prolyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
 gi|226285919|gb|EEH41485.1| prolyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
          Length = 589

 Score = 45.1 bits (105), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 1/61 (1%)

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
           F L P +     ++    + SYR+LP+RL +FG  YR+EP     GL+R R F   D + 
Sbjct: 89  FLLAPTHEEEITSLVESSVSSYRDLPLRLYQFGRKYRDEPRPR-QGLLRGREFMMKDLYT 147

Query: 394 F 394
           F
Sbjct: 148 F 148


>gi|300780959|ref|ZP_07090813.1| proline--tRNA ligase [Corynebacterium genitalium ATCC 33030]
 gi|300532666|gb|EFK53727.1| proline--tRNA ligase [Corynebacterium genitalium ATCC 33030]
          Length = 611

 Score = 45.1 bits (105), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 47/205 (22%), Positives = 87/205 (42%), Gaps = 26/205 (12%)

Query: 217 LSRIYGTAWNTQQELTQ----YLYFLEE----SEKRDHRKLAREMDLFHIAEDGSGVIFW 268
           +S  +  A N Q  +T+    +L  L E    +E   H+ L R     +I     GV  W
Sbjct: 1   MSMAHTLALNLQLMITRLSTLFLRTLREDPADAEVPSHKLLVRA---GYIRRAAPGVYSW 57

Query: 269 HRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
              G K  + +   +R ++     +E+  P +L +  ++ +  W  Y  ++F  +  D  
Sbjct: 58  LPLGLKAVRNIEEIVREEMNAIGAQELLFPALLPREPYEATNRWTEYGDDLF--RLQDRK 115

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLK----SYRELPVRLAEFGSVYRNEPSGSLHGLMRV 383
             D+       +  P H  +F   +K    SY++ PV L +  + YR+E +    G++R 
Sbjct: 116 GTDM-------LLGPTHEEMFTLAVKDLYSSYKDFPVTLYQIQTKYRDE-ARPRAGILRG 167

Query: 384 RGFTQDDAHVFCTKEQMFNECLKIH 408
           R F   D++ F   ++  +E    H
Sbjct: 168 REFVMKDSYSFDMTDEGLSESYAAH 192


>gi|50302871|ref|XP_451373.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49640504|emb|CAH02961.1| KLLA0A08448p [Kluyveromyces lactis]
          Length = 672

 Score = 45.1 bits (105), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 73/319 (22%), Positives = 119/319 (37%), Gaps = 55/319 (17%)

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV- 393
           A++P +       +   ++SYR+LP++L ++ SV R E        +R R F   + H  
Sbjct: 272 AIRPTSETVMYPYYAKWIQSYRDLPIKLNQWNSVVRWEFKHP-QPFLRTREFLWQEGHTA 330

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
             TKE    E ++I +    +Y++     ++    T  EK  G D               
Sbjct: 331 HLTKEAAEEEVMQILDFYAGVYEELLAVPVVKGRKTEKEKFAGGDF-------------- 376

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVN 512
                            EG  Y P+         GR  Q  T   +  N    FN    N
Sbjct: 377 -------------TTTCEG--YIPQ--------TGRGIQGATSHHLGQNFSKMFNISVEN 413

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIV-----TTITSS 563
               +   +  ++  +G   R IG+M+     N    +P  +S  Q++V     TT TS 
Sbjct: 414 PLGSEHPKIFAYQNSWGLSTRVIGVMVMIHSDNKGLVIPPRVSQFQSVVLPVGITTKTSD 473

Query: 564 AV-----EYAQEIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASER 617
                  E A+ I + LK   +    D+  N T  +K  ++ +K IP+ I  G K+  + 
Sbjct: 474 EQRAKIHENARAIESRLKKAGIRAFGDYNDNYTPGWKFSQYELKGIPLRIELGPKDLEKE 533

Query: 618 SIGIRRFGSTTTQKVSLLD 636
            +   R        VSL D
Sbjct: 534 QVTCVRRNDGKKIVVSLND 552


>gi|27262306|gb|AAN87434.1| Alanyl-tRNA synthetase [Heliobacillus mobilis]
          Length = 883

 Score = 45.1 bits (105), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 23/163 (14%)

Query: 54  VREGSI---EIITPE--DPRSLAVIRH-SCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYY 106
           V EG+    E +T E    R  A+ RH S  H++  A++ +  E V  A   +  D   +
Sbjct: 543 VEEGTFQAGETVTAEVTGLRRQAIARHHSATHLLHRALKDVLGEHVNQAGSLVTGDRLRF 602

Query: 107 DFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFES---KKEAYKVEILE 163
           DF    P + +E  QIE+ +   + R  P            E+FE+   + +A     L 
Sbjct: 603 DFSHFTPLTREEWKQIEESVNRQVFRSLPV-----------EVFEATLDEAKAMGATALF 651

Query: 164 SIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKFFKLMKVAG 205
                ++V + R G++  +LC G H+++T Q+   FKL+   G
Sbjct: 652 GEKYGDHVRVVRMGDYSMELCGGTHLQNTAQI-GLFKLVSEGG 693


>gi|237751610|ref|ZP_04582090.1| prolyl-tRNA synthetase [Helicobacter bilis ATCC 43879]
 gi|229372976|gb|EEO23367.1| prolyl-tRNA synthetase [Helicobacter bilis ATCC 43879]
          Length = 575

 Score = 45.1 bits (105), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 39/167 (23%), Positives = 75/167 (44%), Gaps = 9/167 (5%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYR 315
           +I + GSG+  +      +   + + +R ++ +    EI    +    LW+QSG ++ Y 
Sbjct: 31  YIHQIGSGIYNFLPLAQIVMDKIKTIVREEMNRAGANEITMGFLTPTSLWEQSGRYEKYS 90

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
                 + A  T K   +F L P +      +    +KSY++LP+ L +    +R+E   
Sbjct: 91  ------ELALFTDKKGASFVLGPTHEECVTEIAKTYIKSYKQLPLNLYQIHLKFRDELRP 144

Query: 376 SLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKDFGFE 421
              GL+R R F   DA+ F  + E +  E + + +  + I+   G +
Sbjct: 145 RF-GLLRAREFVMKDAYSFHDSLESLNKEFINMRDTYVRIFSRLGLD 190


>gi|57999481|emb|CAI45949.1| hypothetical protein [Homo sapiens]
          Length = 1512

 Score = 45.1 bits (105), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 68/307 (22%), Positives = 118/307 (38%), Gaps = 55/307 (17%)

Query: 334  FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH- 392
             A++P +       +   ++S+R+LP++L ++ +V R E        +R R F   + H 
Sbjct: 1116 IAIRPTSETVMYPAYAKWVQSHRDLPIKLNQWCNVVRWEFKHP-QPFLRTREFLWQEGHS 1174

Query: 393  VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
             F T E+   E L+I +L   +Y++     ++    T  EK  G D             +
Sbjct: 1175 AFVTVEEAAEEVLQILDLYAQVYEELLAIPVVKGRKTEKEKFAGGD---------YTTTI 1225

Query: 453  DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
            +   ++S   I  G     G  +   FE + +D                +P      Y N
Sbjct: 1226 EAFISASGRAIQGGTSHHLGQNFSKMFEIVFEDP--------------KIPGEKQFAYQN 1271

Query: 513  SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTT------ITSSAVE 566
            S              +G   R IG+M      N+ L L P  A V        IT++  E
Sbjct: 1272 S--------------WGLTTRTIGVMTMVHGDNMGLVLPPRVACVQVVIIPCGITNALSE 1317

Query: 567  YAQE--IANL------LKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKE-ASE 616
              +E  IA        L S ++ +  D R N +  +K     +K +PI +  G ++  S 
Sbjct: 1318 EDKEALIAKCNDYRRRLLSVNIRVRADLRDNYSPGWKFNHWELKGVPIRLEVGPRDMKSC 1377

Query: 617  RSIGIRR 623
            + + +RR
Sbjct: 1378 QFVAVRR 1384


>gi|329963564|ref|ZP_08301043.1| proline--tRNA ligase [Bacteroides fluxus YIT 12057]
 gi|328528553|gb|EGF55524.1| proline--tRNA ligase [Bacteroides fluxus YIT 12057]
          Length = 497

 Score = 45.1 bits (105), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 65/289 (22%), Positives = 126/289 (43%), Gaps = 56/289 (19%)

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLK 406
           + + + SYR+LP+   ++ +V+R E    L   +R   F   + H    T+E+   E ++
Sbjct: 135 YKNWINSYRDLPILCNQWANVFRWEMRTRL--FLRTAEFLWQEGHTAHATREEAEEEAVR 192

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           + N    +Y +F  EK M                   A  ++KGV      S+ +R    
Sbjct: 193 MLN----VYGEFA-EKYM-------------------AVPVVKGV-----KSANERF--- 220

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
                GA      E +++D  G+  Q GT   +  N    F+  +VN  ++  +   +  
Sbjct: 221 ----AGALNTYTIEAMMQD--GKALQSGTSHFLGQNFAKAFDVQFVNKENKLEY---VWA 271

Query: 526 AVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTITSSAVEYA---QEIANL---L 575
             +G   R +G +I     +    LP  L+PIQ ++  I  +A   A   +++A +   L
Sbjct: 272 TSWGVSTRLMGALIMTHSDDNGLVLPPHLAPIQVVIVPIYKNAEMLAKIDEKVAGIVAKL 331

Query: 576 KSHHLSIETD-FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRR 623
           KS  +S++ D   N+   +K  ++ +K +P+ ++ G ++    ++ I R
Sbjct: 332 KSMGISVKYDNADNKRPGFKFADYEVKGVPVRLVMGGRDLENNTMEIMR 380


>gi|262368848|ref|ZP_06062177.1| prolyl-tRNA synthetase [Acinetobacter johnsonii SH046]
 gi|262316526|gb|EEY97564.1| prolyl-tRNA synthetase [Acinetobacter johnsonii SH046]
          Length = 572

 Score = 45.1 bits (105), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 35/161 (21%), Positives = 68/161 (42%), Gaps = 8/161 (4%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG+  W   G ++   + + +  ++ +    E+  P      LW++SG +  Y   +   
Sbjct: 37  SGLYTWLPMGVRVLNKVAAIVHEEMNNAGSLEVLMPVTQPASLWEESGRYVQYGPELLRF 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           K      +    F L P +      +  + LKSY++LP    +  + +R+E      G+M
Sbjct: 97  KD-----RHGNPFVLGPTHEEVITDLARNELKSYKQLPANFYQVQTKFRDEIRPRF-GVM 150

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLKI-HNLIISIYKDFGFE 421
           R R F   DA+ F + ++   E   I ++    I+   G +
Sbjct: 151 RSREFIMKDAYSFHSNQESLQETYDIMYDAYCKIFTRLGLD 191


>gi|262273675|ref|ZP_06051488.1| alanyl-tRNA synthetase [Grimontia hollisae CIP 101886]
 gi|262222090|gb|EEY73402.1| alanyl-tRNA synthetase [Grimontia hollisae CIP 101886]
          Length = 860

 Score = 45.1 bits (105), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 38/161 (23%), Positives = 70/161 (43%), Gaps = 11/161 (6%)

Query: 36  KKAVAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQV 94
           K   A+   GK+ D +  V + +++     + R    + HS  H++ EA++ +  E VQ 
Sbjct: 525 KYGAAIGHRGKLVDGTLSVGD-TVDAKVDAERRQAIALNHSATHLLHEALRVVLGEHVQQ 583

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
               +  +G  +DF   +    +EL  +EK + E I R+     + ++ E A+       
Sbjct: 584 KGSLVRAEGLRFDFSHLEAVKPEELRAVEKLVNEHIRRNHEVSTEIMNIEAAK------- 636

Query: 155 EAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQV 194
            A     L      +NV +   G++  +LC G H   TG +
Sbjct: 637 -AKGAMALFGEKYDDNVRVLTMGDFSIELCGGTHANRTGDI 676


>gi|258648384|ref|ZP_05735853.1| phosphoribulokinase family protein [Prevotella tannerae ATCC 51259]
 gi|260851554|gb|EEX71423.1| phosphoribulokinase family protein [Prevotella tannerae ATCC 51259]
          Length = 531

 Score = 45.1 bits (105), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 39/175 (22%), Positives = 77/175 (44%), Gaps = 3/175 (1%)

Query: 25  DVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIRHSCAHIMAE 83
           +V + +  +L  +  +V +N K   L   +  +  IE I   +P  +     S   ++ +
Sbjct: 3   EVYDMLEINLPYECTSVKVNNKTEGLHYTIYNDKDIEFIDITNPSGMRTYTRSLFFVLYK 62

Query: 84  AVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQIEKKMQEIIARDSPFLKQYLS 142
           AV  ++P+ ++ I   + +G+Y          + D +A +  KM+ II  + P+ +    
Sbjct: 63  AVCEVYPQARLRIDTPVSNGYYCRLSGLPAGVNGDVVAALRNKMRAIIDANLPYHRITAP 122

Query: 143 HEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
            ++A  LF   +   K ++LE        T Y  G   D   G  + +TGQ++ F
Sbjct: 123 TDEAIALFRQHRLEDKAQLLEG-SGLLYTTYYTLGGTPDYFYGSLLINTGQLQLF 176


>gi|325853118|ref|ZP_08171267.1| alanine--tRNA ligase [Prevotella denticola CRIS 18C-A]
 gi|325484492|gb|EGC87413.1| alanine--tRNA ligase [Prevotella denticola CRIS 18C-A]
          Length = 888

 Score = 45.1 bits (105), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 61/137 (44%), Gaps = 9/137 (6%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEK 124
           + R  +   H+  H++  A++ +  E     G  +  D   +D    Q  + +EL Q+EK
Sbjct: 569 EKRDASAANHTATHLLDYALKQVLGEHAEQKGSYVSPDTLRFDVSHFQKITDEELRQVEK 628

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
            + E+I +D P     L   +   L E+KK        E    K  V + R G   + C 
Sbjct: 629 IVNEMIRKDYP-----LDEHRDTPLEEAKKMGAVALFGEKYGDK--VRVVRFGPSCEFCG 681

Query: 185 GPHVRSTGQVKKFFKLM 201
           G H  STG++  FFK++
Sbjct: 682 GIHATSTGRI-GFFKIV 697


>gi|224025892|ref|ZP_03644258.1| hypothetical protein BACCOPRO_02638 [Bacteroides coprophilus DSM
           18228]
 gi|224019128|gb|EEF77126.1| hypothetical protein BACCOPRO_02638 [Bacteroides coprophilus DSM
           18228]
          Length = 872

 Score = 45.1 bits (105), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 60/134 (44%), Gaps = 16/134 (11%)

Query: 66  DPRSLAVIRHSCAHIMAEAV-QSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D R+     HSC H++ EA+ Q +   V+     +  D   +DF   Q  + ++L ++E 
Sbjct: 554 DKRAACAANHSCTHLLDEALRQVLGTHVEQKGSLVTPDSLRFDFSHFQKVTPEQLREVEH 613

Query: 125 KMQEIIARDSPFLKQY--LSHEKARELFESK--KEAYKVEILESIPAKENVTLYRQGEWF 180
            +   I  + P L +Y  L  EKAREL       E Y  E          V + + G   
Sbjct: 614 LVNAKIRENIP-LTEYRNLPIEKARELGAIALFGEKYGDE----------VRVVQFGSSI 662

Query: 181 DLCRGPHVRSTGQV 194
           + C G HV +TG++
Sbjct: 663 EFCGGTHVSATGKI 676


>gi|297707682|ref|XP_002830624.1| PREDICTED: 39S ribosomal protein L39, mitochondrial-like isoform 1
           [Pongo abelii]
          Length = 338

 Score = 45.1 bits (105), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 86/192 (44%), Gaps = 24/192 (12%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIR---HS 76
           +T    A  +S    +K++   ++G+  D+  P+ +   I+ +T +D     V +    S
Sbjct: 86  STPYSCAMHLSEWYCRKSILALVDGQPWDMYKPLTKSCEIKFLTFKDRDPGEVNKAYWRS 145

Query: 77  CAHIMAEAVQSIWPE------VQVAIGPIIEDGFYYD------FDKEQPFSSDELAQIEK 124
           CA IM   ++  + +      V+    P+I   F YD       D+  P + + L    K
Sbjct: 146 CAMIMGCVIERAFKDEYMVNLVRAPEVPVISGAFCYDVVLDSKLDEWMP-TKENLRSFTK 204

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN----VTLYRQGEWF 180
               +I +D PF    +  + A E+F+  K  YK++ +E   A +N    V L+R G++ 
Sbjct: 205 DAHALIYKDLPFETLEVEAKVALEIFQHNK--YKIDFIEE-KASQNPERIVKLHRIGDFI 261

Query: 181 DLCRGPHVRSTG 192
           D+  GP +  T 
Sbjct: 262 DVSEGPLIPRTS 273


>gi|148284335|ref|YP_001248425.1| alanyl-tRNA synthetase [Orientia tsutsugamushi str. Boryong]
 gi|205830167|sp|A5CD03|SYA_ORITB RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|146739774|emb|CAM79640.1| alanyl-tRNA synthetase [Orientia tsutsugamushi str. Boryong]
          Length = 891

 Score = 45.1 bits (105), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 67/149 (44%), Gaps = 20/149 (13%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKM 126
           R+   I HS  HI+  A++ I     +  G ++  D   +D       S + L +IE ++
Sbjct: 569 RTQLQIHHSATHILHAALREILGNHIIQKGSLVAYDYLRFDVSHPTSISREILTKIENRV 628

Query: 127 QEIIARDS-------PFLKQYLSHEKARELFESK--KEAYKVEILESIPAKENVTLYRQG 177
            EII  ++       PF  Q ++H  A  LFE K   E   + I E+  A+     Y   
Sbjct: 629 NEIILNNTAVKLMIMPF-DQAIAH-GAVALFEEKYGDEVRAISIGETSDAR----YYS-- 680

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGA 206
             F+LC G HV+ TG +  F  L + A A
Sbjct: 681 --FELCGGTHVKYTGDIGAFRILSESAIA 707


>gi|326913192|ref|XP_003202924.1| PREDICTED: 39S ribosomal protein L39, mitochondrial-like [Meleagris
           gallopavo]
          Length = 225

 Score = 45.1 bits (105), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 37/149 (24%), Positives = 69/149 (46%), Gaps = 15/149 (10%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT--PEDPRSL-AVIRHS 76
           +T  + A  +S    KK+V   ++G+V D+  P+ +   I+ +T   EDP  +      S
Sbjct: 77  STPYNCAMHLSEWHCKKSVLALVDGEVWDMYRPLTKSCEIQFLTFKDEDPEEVNKAYWRS 136

Query: 77  CAHIMAEAVQSIWPE------VQVAIGPIIEDGFYYDFDKEQPF-----SSDELAQIEKK 125
           CA IMA  ++  + +      V+    P+I   F YD   +        + D    + + 
Sbjct: 137 CAMIMASVLKRAFKDEYSVNLVKAPEVPVISGAFCYDIILDNRLNDWKPTKDNFRSLTRD 196

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKK 154
             ++I +D PF   ++  + ARE+F++ K
Sbjct: 197 ASKLIDKDLPFETLHVEAKVAREMFQNNK 225


>gi|261253697|ref|ZP_05946270.1| prolyl-tRNA synthetase [Vibrio orientalis CIP 102891]
 gi|260937088|gb|EEX93077.1| prolyl-tRNA synthetase [Vibrio orientalis CIP 102891]
          Length = 571

 Score = 45.1 bits (105), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 38/162 (23%), Positives = 72/162 (44%), Gaps = 10/162 (6%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINT--PQVLDQHLWQQSGHWDSYRANMFA 320
           SG+  W   G ++ + + + +R++I D+   + T  P V    LW+++G     R+    
Sbjct: 37  SGLYTWLPTGLRVLRKVENIVRQEI-DNAGAVETLMPVVQPFELWEETG-----RSEKMG 90

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +    T +  R F L P       ++  + + SY++LP+ L +  + +R+E      G+
Sbjct: 91  PELLRFTDRHTRPFVLSPTAEEVITSLVRNEVSSYKQLPLNLYQIQTKFRDERRPRF-GV 149

Query: 381 MRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFE 421
           MR R F   DA+ F   K  +      +H+     +   G E
Sbjct: 150 MRAREFCMMDAYSFDIDKSGLEKSYQAMHDAYCKAFDRMGLE 191


>gi|227827985|ref|YP_002829765.1| threonyl-tRNA synthetase editing domain protein [Sulfolobus
           islandicus M.14.25]
 gi|227459781|gb|ACP38467.1| Threonyl-tRNA synthetase editing domain protein [Sulfolobus
           islandicus M.14.25]
          Length = 386

 Score = 45.1 bits (105), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 20/89 (22%), Positives = 48/89 (53%)

Query: 546 LPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPI 605
           LP WL+PIQ  +  +    ++++ ++A  L+   + +  D  ++++  KIR    + IP 
Sbjct: 269 LPDWLNPIQVRLLPVKKDFLDFSIQVAERLRKEGIRVNIDDLDDSLGNKIRRAGTEWIPF 328

Query: 606 IIICGDKEASERSIGIRRFGSTTTQKVSL 634
           +II G++E    ++ ++   +   + +S+
Sbjct: 329 VIIIGEREVKTSTLTVKIRANNEQKSMSV 357


>gi|229585254|ref|YP_002843756.1| Threonyl-tRNA synthetase editing domain protein [Sulfolobus
           islandicus M.16.27]
 gi|238620213|ref|YP_002915039.1| Threonyl-tRNA synthetase editing domain protein [Sulfolobus
           islandicus M.16.4]
 gi|228020304|gb|ACP55711.1| Threonyl-tRNA synthetase editing domain protein [Sulfolobus
           islandicus M.16.27]
 gi|238381283|gb|ACR42371.1| Threonyl-tRNA synthetase editing domain protein [Sulfolobus
           islandicus M.16.4]
          Length = 386

 Score = 45.1 bits (105), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 20/89 (22%), Positives = 48/89 (53%)

Query: 546 LPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPI 605
           LP WL+PIQ  +  +    ++++ ++A  L+   + +  D  ++++  KIR    + IP 
Sbjct: 269 LPDWLNPIQVRLLPVKKDFLDFSIQVAERLRKEGIRVNIDDLDDSLGNKIRRAGTEWIPF 328

Query: 606 IIICGDKEASERSIGIRRFGSTTTQKVSL 634
           +II G++E    ++ ++   +   + +S+
Sbjct: 329 VIIIGEREVKTSTLTVKIRANNEQKSMSV 357


>gi|114683717|ref|XP_001158002.1| PREDICTED: 39S ribosomal protein L39, mitochondrial isoform 1 [Pan
           troglodytes]
 gi|114683719|ref|XP_001158054.1| PREDICTED: mitochondrial ribosomal protein L39 isoform 2 [Pan
           troglodytes]
          Length = 353

 Score = 45.1 bits (105), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 46/192 (23%), Positives = 86/192 (44%), Gaps = 24/192 (12%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIR---HS 76
           +T    A  +S    +K++   ++G+  D+  P+ +   I+ +T +D     V +    S
Sbjct: 86  STPYSCAMHLSEWYCRKSILALVDGQPWDMYKPLTKSCEIKFLTFKDRDPGEVNKAYWRS 145

Query: 77  CAHIMAEAVQSIWPE------VQVAIGPIIEDGFYYD------FDKEQPFSSDELAQIEK 124
           CA +M   ++  + +      V+    P+I   F YD       D+  P + + L    K
Sbjct: 146 CAMMMGYVIERAFKDEYMVNLVRAPEVPVISGAFCYDVVLDSKLDEWMP-TKENLRSFTK 204

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN----VTLYRQGEWF 180
               +I +D PF    +  + A E+F+  K  YK++ +E   A +N    V L+R G++ 
Sbjct: 205 DAHALIYKDLPFETLEVEAKVALEIFQHSK--YKIDFIEE-KASQNPERIVKLHRIGDFI 261

Query: 181 DLCRGPHVRSTG 192
           D+  GP +  T 
Sbjct: 262 DVSEGPLIPRTS 273


>gi|148657329|ref|YP_001277534.1| alanyl-tRNA synthetase [Roseiflexus sp. RS-1]
 gi|148569439|gb|ABQ91584.1| alanyl-tRNA synthetase [Roseiflexus sp. RS-1]
          Length = 931

 Score = 45.1 bits (105), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 7/102 (6%)

Query: 54  VREGSIEIITPEDP-----RSLAVIR-HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYY 106
           V  GS+ +  P D      R  A++R H+  H++  A++ +  E     G ++  D   +
Sbjct: 568 VESGSVMLHDPVDAHVDSGRRAAIMRNHTATHLLHRALRDVLGEHAAQAGSLVAPDRLRF 627

Query: 107 DFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE 148
           DF   +P + ++L +IE+++   I  D+P + Q LS++ A E
Sbjct: 628 DFTHTRPLTPEQLHEIERRVNAWIRADTPVVWQELSYQAAIE 669


>gi|327314000|ref|YP_004329437.1| alanine--tRNA ligase [Prevotella denticola F0289]
 gi|326944684|gb|AEA20569.1| alanine--tRNA ligase [Prevotella denticola F0289]
          Length = 888

 Score = 45.1 bits (105), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 61/137 (44%), Gaps = 9/137 (6%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEK 124
           + R  +   H+  H++  A++ +  E     G  +  D   +D    Q  + +EL Q+EK
Sbjct: 569 EKRDASAANHTATHLLDYALKQVLGEHAEQKGSYVSPDTLRFDVSHFQKITDEELRQVEK 628

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
            + E+I +D P     L   +   L E+KK        E    K  V + R G   + C 
Sbjct: 629 IVNEMIRKDYP-----LDEHRDTPLEEAKKMGAVALFGEKYGDK--VRVVRFGPSCEFCG 681

Query: 185 GPHVRSTGQVKKFFKLM 201
           G H  STG++  FFK++
Sbjct: 682 GIHATSTGRI-GFFKIV 697


>gi|241888520|ref|ZP_04775828.1| prolyl-tRNA synthetase [Gemella haemolysans ATCC 10379]
 gi|241864787|gb|EER69161.1| prolyl-tRNA synthetase [Gemella haemolysans ATCC 10379]
          Length = 572

 Score = 45.1 bits (105), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 32/133 (24%), Positives = 60/133 (45%), Gaps = 11/133 (8%)

Query: 279 LISYMRRKIKDDYEEINTPQVL-----DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           +I  + + I++++ +I   ++L         W++SG WD     +  V     T +    
Sbjct: 55  VIQKIEKVIREEHSKIGAAELLMPILQSDEYWKKSGRWDKMGEELIRV-----TDRKKAG 109

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
           +AL P          N+ + SY++LP+ L +  + +R+E    L GL+R + F   DA+ 
Sbjct: 110 YALSPTAEEIVSQTVNNMVTSYKQLPMNLYQIQTKFRDEIRPRL-GLLRCKEFIMKDAYS 168

Query: 394 FCTKEQMFNECLK 406
           F    +   E  K
Sbjct: 169 FHDSPESLRETYK 181


>gi|126695873|ref|YP_001090759.1| prolyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
 gi|166980139|sp|A3PBN3|SYP_PROM0 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|126542916|gb|ABO17158.1| Prolyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
          Length = 600

 Score = 45.1 bits (105), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 34/133 (25%), Positives = 60/133 (45%), Gaps = 10/133 (7%)

Query: 297 PQVLDQHLWQQSGHWDSYRAN---MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           PQ+    LW++S  W+ Y A    MF +K      +  + F L P +     ++ +  + 
Sbjct: 73  PQLHPADLWKKSERWEGYTAGEGIMFNLKD-----RQGKEFGLAPTHEEVITSIASETIN 127

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLII 412
           SY++LP    +  + +R+E      GLMR R F   D + F + E        K+ N   
Sbjct: 128 SYKQLPQCFYQIQTKFRDEIRPRF-GLMRSREFIMKDGYSFHSSENDLASFYEKVGNAYE 186

Query: 413 SIYKDFGFEKIMV 425
           +I++  G + + V
Sbjct: 187 NIFESCGLQTVGV 199


>gi|108803928|ref|YP_643865.1| prolyl-tRNA synthetase [Rubrobacter xylanophilus DSM 9941]
 gi|123069165|sp|Q1AX25|SYP_RUBXD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|108765171|gb|ABG04053.1| prolyl-tRNA synthetase [Rubrobacter xylanophilus DSM 9941]
          Length = 476

 Score = 45.1 bits (105), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 76/359 (21%), Positives = 139/359 (38%), Gaps = 95/359 (26%)

Query: 319 FAVKCA------DDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE 372
           FA +CA      DD +++    A++P +       +   + SYR+LPV + ++ +V R E
Sbjct: 88  FAPECAWVTVGGDDELEE--RLAIRPTSESIICDFYRKWIHSYRDLPVLINQWCNVLRWE 145

Query: 373 PSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL----------IISIYKDFGFEK 422
                   M  R F +       T E ++ E   +H            ++++Y+D  +E 
Sbjct: 146 --------MVTRPFLR-------TAEFLWQEGHTVHATAEEAREEALRMLNVYRDCFYEV 190

Query: 423 IMVKLST---RPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           + + + T    P +R               G ++T             L+G+G       
Sbjct: 191 LAIPVLTGMKSPSER-------------FAGAVETFTCEG--------LMGDG------- 222

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
              L+ A   D       +  N    F+  +++ + E+ HP   ++  +G   R IG +I
Sbjct: 223 -RALQAATSHD-------LGQNFARAFDITFLDENQERVHP---YQTSWGFSTRTIGALI 271

Query: 540 ----ENFKGNLPLWLSPIQAIVTTI-----TSSAVEYAQEIANLLKSHHLSIETDFRNE- 589
               ++    LP  L+P QA+V  I            A+ +   L    L  E D   E 
Sbjct: 272 LVHGDDRGLRLPPKLAPTQAVVVPIWRGKNKGEVRREAEALHRELAEAGLRAEADLDEEH 331

Query: 590 TINYKIREHSIKKIPIIIICGDKEASE-------RSIGIRRF---GSTTTQKVSLLDAI 638
           +  +K  EH ++ +P+ +  G K+  +       R  G + F   G+   + V L+D I
Sbjct: 332 SPGWKFNEHELRGVPVRVELGPKDIEKGQAVLVRRDTGEKEFVGRGAAARRLVELMDEI 390


>gi|264676905|ref|YP_003276811.1| prolyl-tRNA synthetase [Comamonas testosteroni CNB-2]
 gi|262207417|gb|ACY31515.1| prolyl-tRNA synthetase [Comamonas testosteroni CNB-2]
          Length = 580

 Score = 45.1 bits (105), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 31/134 (23%), Positives = 62/134 (46%), Gaps = 7/134 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           G+G+  +   G ++ + + + +R ++ +    E   P V    LWQ++G ++     +  
Sbjct: 36  GAGIYNYMPMGLRVIRKVEAIVREEMNRAGAIETTMPVVQPAELWQETGRFEKMGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           ++      +  R F ++P +      +     KSY++LP  L +  + +R+E      GL
Sbjct: 96  IQD-----RHGRDFVIQPTSEEVVTDIARQEFKSYKQLPKNLYQIQTKFRDERRPRF-GL 149

Query: 381 MRVRGFTQDDAHVF 394
           MR R F   DA+ F
Sbjct: 150 MRGREFIMKDAYSF 163


>gi|239928618|ref|ZP_04685571.1| prolyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
 gi|291436943|ref|ZP_06576333.1| prolyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
 gi|291339838|gb|EFE66794.1| prolyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
          Length = 567

 Score = 45.1 bits (105), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 38/174 (21%), Positives = 77/174 (44%), Gaps = 18/174 (10%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R     ++    +G+  W   G K+   +   +R ++     +E+  P 
Sbjct: 23  DAEVLSHKLLVRA---GYVRRTAAGIWTWLPLGKKVLANVERIVREEMDAIGAQEVLLPA 79

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L +  ++ +G WD Y   +F  +  D    D        +  P H  +F   +K    S
Sbjct: 80  LLPREPYEATGRWDEYGPELF--RLQDRKGGDY-------LLGPTHEEIFTLLVKDQASS 130

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
           Y++LPV L +  + +R+E +    G++R R F   D++ F  +++       +H
Sbjct: 131 YKDLPVILYQIQTKFRDE-ARPRAGILRGREFLMKDSYSFDLEDEGLARSYALH 183


>gi|85715195|ref|ZP_01046179.1| alanyl-tRNA synthetase [Nitrobacter sp. Nb-311A]
 gi|85698110|gb|EAQ35983.1| alanyl-tRNA synthetase [Nitrobacter sp. Nb-311A]
          Length = 892

 Score = 45.1 bits (105), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 33/136 (24%), Positives = 61/136 (44%), Gaps = 8/136 (5%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEK 124
           D R+     HS  H++ EA++ +  +     G ++  +   +DF   +P S DEL +IE 
Sbjct: 555 DRRAAIRANHSATHLLHEALRQVLGDHIAQRGSLVAPERLRFDFAHNKPISGDELRRIED 614

Query: 125 KMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEW 179
              +++  +     + ++ + ARE     LF  +K   +V ++    A           W
Sbjct: 615 IANDVVLENGEVTTRLMAVDDAREAGARALF-GEKYGDEVRVVSMGGAGRQGAPSNALGW 673

Query: 180 -FDLCRGPHVRSTGQV 194
             +LC G HV+ TG +
Sbjct: 674 SVELCGGTHVKRTGDI 689


>gi|121601991|ref|YP_989027.1| alanyl-tRNA synthetase [Bartonella bacilliformis KC583]
 gi|205829988|sp|A1USS4|SYA_BARBK RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|120614168|gb|ABM44769.1| alanyl-tRNA synthetase [Bartonella bacilliformis KC583]
          Length = 886

 Score = 45.1 bits (105), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 63/144 (43%), Gaps = 12/144 (8%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSD 117
           +E+I     R      HS  H++ E+++       V  G  +  D   +DF   +  SS+
Sbjct: 548 VELIVDSARRRKIRANHSATHLLHESLRQTLGSHVVQKGSFVSPDRLRFDFSHPKSISSE 607

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLS-----HEKARELFESKKEAYKVEILESIPAKENVT 172
           EL +IE    +I+ ++S    + ++      E A  LF    E Y  E+   I    N+ 
Sbjct: 608 ELKKIEDLANDIVLQNSKVTTRLMAIDDAIAEGAMALF---GEKYGDEV-RVISMGNNLE 663

Query: 173 LYRQGEWF--DLCRGPHVRSTGQV 194
                +W+  +LC G HV+ TG +
Sbjct: 664 QTGSKKWWSIELCGGTHVQRTGDI 687


>gi|319405869|emb|CBI79501.1| Alanyl-tRNA synthetase [Bartonella sp. AR 15-3]
          Length = 889

 Score = 45.1 bits (105), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 10/143 (6%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSD 117
           +E+    + R      HS  H++ EA++ I  P V      +      +DF   +P SS+
Sbjct: 548 VELTVDSERRRKIRANHSATHLLHEALRRILGPHVAQKGSLVSPSRLRFDFSHPKPISSE 607

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLS-----HEKARELFESKKEAYKVEILESIPAKENVT 172
           EL ++E    +I+ ++S    + ++      E A  LF  +K   +V ++      E + 
Sbjct: 608 ELKRVEDLANDIVLQNSQVTTRLMALDDAVFEGAVALF-GEKYGDEVRVVSMGERCEPIA 666

Query: 173 LYRQGEW-FDLCRGPHVRSTGQV 194
           L +   W  +LC G HV+ TG +
Sbjct: 667 LKKH--WSIELCGGTHVQRTGDI 687


>gi|299529723|ref|ZP_07043160.1| prolyl-tRNA synthetase [Comamonas testosteroni S44]
 gi|298722586|gb|EFI63506.1| prolyl-tRNA synthetase [Comamonas testosteroni S44]
          Length = 580

 Score = 45.1 bits (105), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 31/134 (23%), Positives = 62/134 (46%), Gaps = 7/134 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           G+G+  +   G ++ + + + +R ++ +    E   P V    LWQ++G ++     +  
Sbjct: 36  GAGIYNYMPMGLRVIRKVEAIVREEMNRAGAIETTMPVVQPAELWQETGRFEKMGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           ++      +  R F ++P +      +     KSY++LP  L +  + +R+E      GL
Sbjct: 96  IQD-----RHGRDFVIQPTSEEVVTDIARQEFKSYKQLPKNLYQIQTKFRDERRPRF-GL 149

Query: 381 MRVRGFTQDDAHVF 394
           MR R F   DA+ F
Sbjct: 150 MRGREFIMKDAYSF 163


>gi|300722254|ref|YP_003711538.1| alanyl-tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
 gi|297628755|emb|CBJ89333.1| alanyl-tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
          Length = 875

 Score = 45.1 bits (105), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 33/131 (25%), Positives = 59/131 (45%), Gaps = 18/131 (13%)

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY-YDFDKEQPFSSDELAQIEKKMQEIIA 131
           + HS  H++  A++ I  E     G ++ D +  +DF   +   S+++ Q+E  + E I 
Sbjct: 562 LNHSATHLLHAALRQILGEHVAQKGSLVNDKYLRFDFSHFEAMKSEQIRQVENLVNEEIR 621

Query: 132 RDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGP 186
           ++SP + + ++ E A+      LF  K +  KV +L              G   +LC G 
Sbjct: 622 KNSPVVTELMALEDAKSKGAMALFGEKYDE-KVRVLS-----------MGGFSTELCGGT 669

Query: 187 HVRSTGQVKKF 197
           H   TG +  F
Sbjct: 670 HASRTGDIGVF 680


>gi|169841890|ref|ZP_02874999.1| Threonyl-tRNA synthetase [candidate division TM7 single-cell
           isolate TM7a]
          Length = 41

 Score = 45.1 bits (105), Expect = 0.044,   Method: Composition-based stats.
 Identities = 19/41 (46%), Positives = 29/41 (70%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTL 279
           EE+E+RDHRKL ++++LF + E G G  F+  KG ++F  L
Sbjct: 1   EEAERRDHRKLGKQLNLFFLDEHGPGFPFFMPKGVELFNKL 41


>gi|51245016|ref|YP_064900.1| prolyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
 gi|81826866|sp|Q6AP31|SYP_DESPS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|50876053|emb|CAG35893.1| probable prolyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
          Length = 570

 Score = 45.1 bits (105), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 66/141 (46%), Gaps = 7/141 (4%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SGV  +   G    + + + +R ++ +   +E+  P V    LW+++G ++ Y   +   
Sbjct: 37  SGVYSYLPYGLAAIRKVENIVREEMNRAGAQEMLMPMVQPADLWKETGRYEKYGPELL-- 94

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           +  D   ++ R   L P +      +  + L SYR+LP+ L +  + +R+E      GLM
Sbjct: 95  RFFD---RNNRESCLGPTHEEVITDIVRNELSSYRDLPINLYQIQTKFRDEIRPRF-GLM 150

Query: 382 RVRGFTQDDAHVFCTKEQMFN 402
           R R F   DA+ F   ++  N
Sbjct: 151 RGREFVMKDAYSFDVDDEQAN 171


>gi|255348758|ref|ZP_05380765.1| prolyl-tRNA synthetase [Chlamydia trachomatis 70]
 gi|255503298|ref|ZP_05381688.1| prolyl-tRNA synthetase [Chlamydia trachomatis 70s]
 gi|255506977|ref|ZP_05382616.1| prolyl-tRNA synthetase [Chlamydia trachomatis D(s)2923]
 gi|407685|gb|AAA23161.1| aminoacyl-tRNA synthetase [Chlamydia trachomatis]
 gi|289525435|emb|CBJ14912.1| prolyl-tRNA synthetase [Chlamydia trachomatis Sweden2]
 gi|296434987|gb|ADH17165.1| prolyl-tRNA synthetase [Chlamydia trachomatis E/150]
 gi|296438707|gb|ADH20860.1| prolyl-tRNA synthetase [Chlamydia trachomatis E/11023]
 gi|745528|prf||2016314B AA-tRNA synthetase
          Length = 581

 Score = 44.7 bits (104), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 38/173 (21%), Positives = 74/173 (42%), Gaps = 14/173 (8%)

Query: 263 SGVIFWHRKG----WKIFQTLISYMRRKIKDDY-----EEINTPQVLDQHLWQQSGHWDS 313
           +G +F   KG      +FQ +I  M   I+++      +E+  P +    LW+++G W +
Sbjct: 29  AGYLFKTSKGIYSYTPLFQRVILKMTEIIREELNAIGGQEVCLPLLQPAELWEKTGRWKA 88

Query: 314 YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP 373
           + +        D   ++     L P +           L    +LP+ L + G+ +R+E 
Sbjct: 89  FLSEKLLYVLKD---RENEAMCLAPTHEEVVSEFVAQWLTGREQLPIHLYQIGTKFRDEI 145

Query: 374 SGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
                GLMR + F  +D++ F  + EQM  +  K+      I+     + ++V
Sbjct: 146 RPRF-GLMRAKEFLMEDSYTFSDSPEQMEEQYAKLRLAYQRIFDRLNLKYVIV 197


>gi|2500957|sp|P70865|SYA_BARBA RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|1568622|gb|AAB09037.1| AlaS [Bartonella bacilliformis]
          Length = 886

 Score = 44.7 bits (104), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 63/144 (43%), Gaps = 12/144 (8%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSD 117
           +E+I     R      HS  H++ E+++       V  G  +  D   +DF   +  SS+
Sbjct: 548 VELIVDSARRRKIRANHSATHLLHESLRQTLGSHVVQKGSFVSPDRLRFDFSHPKSISSE 607

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLS-----HEKARELFESKKEAYKVEILESIPAKENVT 172
           EL +IE    +I+ ++S    + ++      E A  LF    E Y  E+   I    N+ 
Sbjct: 608 ELKKIEDLANDIVLQNSKVTTRLMAIDDAIAEGAMALF---GEKYGDEV-RVISMGNNLE 663

Query: 173 LYRQGEWF--DLCRGPHVRSTGQV 194
                +W+  +LC G HV+ TG +
Sbjct: 664 QTGSKKWWSIELCGGTHVQRTGDI 687


>gi|46108902|ref|XP_381509.1| hypothetical protein FG01333.1 [Gibberella zeae PH-1]
          Length = 548

 Score = 44.7 bits (104), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 53/117 (45%), Gaps = 9/117 (7%)

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW++S   DS    +F +K   DT        L P +      +    + SY++LP+R
Sbjct: 58  EELWRRSNRLDSVAPELFRLKDRKDT-----PLILSPTHEEEITTLVAGIVNSYKDLPIR 112

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           L +    YR+E     HGL+R R F   D + F   +   +E ++ +  +   Y+ F
Sbjct: 113 LYQITRKYRDE-RRPRHGLLRSREFLMKDLYTF---DLTTSEAVETYRQVSGAYRAF 165


>gi|298292138|ref|YP_003694077.1| alanyl-tRNA synthetase [Starkeya novella DSM 506]
 gi|296928649|gb|ADH89458.1| alanyl-tRNA synthetase [Starkeya novella DSM 506]
          Length = 883

 Score = 44.7 bits (104), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 38/153 (24%), Positives = 66/153 (43%), Gaps = 17/153 (11%)

Query: 54  VREGSIEIITP-----EDPRSLAV-IRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYY 106
           V EG++ I  P     +  R  A+   HS  H++ EA++ +  +     G ++  D   +
Sbjct: 538 VEEGTLTIGAPLALFVDGERRQAIRANHSATHLLHEALRRVLGDHVAQKGSLVAPDRLRF 597

Query: 107 DFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLS-----HEKARELFESKKEAYKVEI 161
           DF   +P  + EL  +E     I+ R+ P + + ++        AR LF  +K   +V +
Sbjct: 598 DFSHPKPVEAAELKAVEDIANRIVLRNEPVVTRLMAVDDAIESGARALF-GEKYGDEVRV 656

Query: 162 LESIPAKENVTLYRQGEWFDLCRGPHVRSTGQV 194
           +       N   Y      +LC G HV  TG +
Sbjct: 657 VSMGTDPGNGAPYS----VELCGGTHVARTGDI 685


>gi|289582184|ref|YP_003480650.1| prolyl-tRNA synthetase [Natrialba magadii ATCC 43099]
 gi|289531737|gb|ADD06088.1| prolyl-tRNA synthetase [Natrialba magadii ATCC 43099]
          Length = 493

 Score = 44.7 bits (104), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 66/280 (23%), Positives = 114/280 (40%), Gaps = 52/280 (18%)

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
           +S+R+LP+RL ++ SV R E +         + F       F TKE M+ E    H    
Sbjct: 129 RSHRDLPLRLNQWCSVVRWEAT-------ETKPF-------FRTKEFMWQEGHTAHATDE 174

Query: 413 SIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
           S +     E++  +L     ++V  + L   A  +++G     K    D+         G
Sbjct: 175 SAW-----EEVWTRLDQY--EKVYEEVL---AIPVLRG-----KKPEHDKFP-------G 212

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF-NAFYVNSHSEKCHPVMIHRAVFGSI 531
           A      E ++ D  G+  Q  T     NL   F  AF ++   E       +   +G  
Sbjct: 213 ADTTTTVEALMPD--GKSVQGATSH---NLGQSFAEAFDISFVDEDEEERTAYTTSWGLS 267

Query: 532 ERFIGIMIENFKGN----LPLWLSPIQAIVTTI-----TSSAVEYAQEIANLLKSHHLSI 582
            R +G +I     +    LP  ++P Q  +  I      +  +EY+Q IA+ L+    S+
Sbjct: 268 WRALGALIMTHSDDQGLVLPPTIAPTQVAIVPIWQEETKADVLEYSQNIADELEEAGFSV 327

Query: 583 ETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGI 621
           E D R+E    +K  EH +  +P+ +  G  E  +  + +
Sbjct: 328 ELDDRDERNPGFKFNEHELNGVPLRLEIGPYEVEDEEVTL 367


>gi|227830722|ref|YP_002832502.1| threonyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
 gi|229579616|ref|YP_002838015.1| Threonyl-tRNA synthetase editing domain protein [Sulfolobus
           islandicus Y.G.57.14]
 gi|229581718|ref|YP_002840117.1| Threonyl-tRNA synthetase editing domain protein [Sulfolobus
           islandicus Y.N.15.51]
 gi|284998235|ref|YP_003420003.1| Anticodon-binding domain protein [Sulfolobus islandicus L.D.8.5]
 gi|227457170|gb|ACP35857.1| Threonyl-tRNA synthetase editing domain protein [Sulfolobus
           islandicus L.S.2.15]
 gi|228010331|gb|ACP46093.1| Threonyl-tRNA synthetase editing domain protein [Sulfolobus
           islandicus Y.G.57.14]
 gi|228012434|gb|ACP48195.1| Threonyl-tRNA synthetase editing domain protein [Sulfolobus
           islandicus Y.N.15.51]
 gi|284446131|gb|ADB87633.1| Anticodon-binding domain protein [Sulfolobus islandicus L.D.8.5]
          Length = 386

 Score = 44.7 bits (104), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 20/89 (22%), Positives = 48/89 (53%)

Query: 546 LPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPI 605
           LP WL+PIQ  +  +    ++++ ++A  L+   + +  D  ++++  KIR    + IP 
Sbjct: 269 LPDWLNPIQVRLLPVKKDFLDFSIQVAERLRKEGIRVNIDDLDDSLGNKIRRAGTEWIPF 328

Query: 606 IIICGDKEASERSIGIRRFGSTTTQKVSL 634
           +II G++E    ++ ++   +   + +S+
Sbjct: 329 VIIIGEREVKTSTLTVKIRANNEQKSMSV 357


>gi|159043296|ref|YP_001532090.1| prolyl-tRNA synthetase [Dinoroseobacter shibae DFL 12]
 gi|189083497|sp|A8LQU6|SYP_DINSH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|157911056|gb|ABV92489.1| prolyl-tRNA synthetase [Dinoroseobacter shibae DFL 12]
          Length = 445

 Score = 44.7 bits (104), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 41/183 (22%), Positives = 76/183 (41%), Gaps = 11/183 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  +G+  W   G+K+ + +   +   + +  +  +  P +    LW++SG +D Y  
Sbjct: 32  IKQASAGIYSWLPLGYKVLRRIEEIVHEEQQRAGHIPMLMPTLQSADLWRESGRYDDYGQ 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  +     T +  R     P N      +F   + SY++LP+ L      +R+E    
Sbjct: 92  EMLRI-----TDRHGRDMLYGPTNEELITDIFRSNVGSYKDLPLTLYHIQWKFRDEVRPR 146

Query: 377 LHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
             G+MR R F   D + F  TKE   +   +     +  Y+  G + I ++    P   +
Sbjct: 147 F-GVMRGREFLMKDGYNFDLTKEAALHAYNRHLVSYLRSYERMGLQAIPMRADGGP---I 202

Query: 436 GSD 438
           G D
Sbjct: 203 GGD 205


>gi|322706591|gb|EFY98171.1| prolyl-tRNA synthetase [Metarhizium anisopliae ARSEF 23]
          Length = 556

 Score = 44.7 bits (104), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 81/382 (21%), Positives = 148/382 (38%), Gaps = 61/382 (15%)

Query: 275 IFQTLISYMRRKIKD-DYEEINTPQVLDQ-HLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           I+ T+  +    I++   EE + P  L +  L ++  H D +   +  V+ A D   D+ 
Sbjct: 90  IWSTIRKWFSGHIEELGVEEASFPLFLSKTSLDKEKDHVDGFAPELAWVERAGDKKLDV- 148

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
             A++P +       +   ++S+R+LP+RL ++ SV R E   +    +R R F   + H
Sbjct: 149 PVAIRPTSEAVMYPYYAKWIRSHRDLPLRLNQWNSVVRWEAKQTTP-FLRTREFLWQEGH 207

Query: 393 V-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
               T+E    E L+I  L   +Y+      ++    T  EK                  
Sbjct: 208 TAHLTEELAGEEVLEILELYAGVYEQLLAVPVVRGRKTENEKFA---------------- 251

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFE-YILKDAIGRDWQCGTIQ-VDFNLPSRFNAF 509
                               G +Y    E YI  +  GR  Q GT   +  N    F   
Sbjct: 252 --------------------GGYYTTTVEGYIPSN--GRGIQGGTSHCLGQNFSKMFEIT 289

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIV-------T 558
             + H++  H V + +  +G   R IG+M+     +  L L P     QAI         
Sbjct: 290 VEDPHNKGQH-VHVWQNSWGLSTRVIGVMVMVHGDDKGLVLPPRVAQTQAIFIPVGINKN 348

Query: 559 TITSSAVEYAQEIANL---LKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEA 614
           T      ++  +I ++   LK   +  ++D+R   T  +K  +  +K +P+ +  G K+A
Sbjct: 349 TTPEDRQKHEDQIEDMRATLKKAGVRTQSDWREGYTPAWKFNDWEMKGVPVRLEFGPKDA 408

Query: 615 SERSIGIRRFGSTTTQKVSLLD 636
           ++  +   R  +     + + D
Sbjct: 409 AKEVVSFARRDTGEKGTIPIAD 430


>gi|320354759|ref|YP_004196098.1| alanyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
 gi|320123261|gb|ADW18807.1| alanyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
          Length = 882

 Score = 44.7 bits (104), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 34/141 (24%), Positives = 61/141 (43%), Gaps = 10/141 (7%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D R+   + H+  H++  A++ +  + V+ A   +  +   +DF    P +  E+  IE+
Sbjct: 560 DRRTDTALNHTATHLLQAAMKKVLGDHVKQAGSAVDHNRLRFDFTHFSPLTHGEICTIEQ 619

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF-DLC 183
            +   I R++P     L  E+A         A     L      E V + R G++  +LC
Sbjct: 620 LVNAQIRRNTPVDTTLLGREQAI--------AEGATALFGEKYGEEVRVVRIGDFSKELC 671

Query: 184 RGPHVRSTGQVKKFFKLMKVA 204
            G H R TG +  F  +M+  
Sbjct: 672 GGTHARMTGDIGLFKIVMETG 692


>gi|71892071|ref|YP_277801.1| prolyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus str.
           BPEN]
 gi|114152172|sp|Q493B4|SYP_BLOPB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|71796177|gb|AAZ40928.1| prolyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus str.
           BPEN]
          Length = 581

 Score = 44.7 bits (104), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 36/166 (21%), Positives = 74/166 (44%), Gaps = 9/166 (5%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDLFH--IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-K 288
           +QYL    +   ++ + ++ ++ L    I +  SG+  W   G ++ + + + +R ++ K
Sbjct: 4   SQYLLATLKEAPKNCKAISHQLMLRAGLIRQVSSGLYTWLPTGLRVLRKIENIIREEMSK 63

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
               EI  P V    LW++SG W  Y   +   K  ++     + F L P +      + 
Sbjct: 64  IGAIEIAMPIVQPARLWKKSGRWTGYGTELLRFKNRNN-----QEFVLGPTHEEMVSEII 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
                 Y++ P+ + +  + YR+E +    G++R R F   D + F
Sbjct: 119 CKETMLYKQFPLIVYQIHTKYRDE-ARPRSGVIRAREFIMKDGYSF 163


>gi|294339360|emb|CAZ87716.1| alanyl-tRNA synthetase [Thiomonas sp. 3As]
          Length = 917

 Score = 44.7 bits (104), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 37/149 (24%), Positives = 69/149 (46%), Gaps = 10/149 (6%)

Query: 51  SDPVREGSIEIITPEDPRSLAVIR-HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDF 108
           S  ++ G I     +  R  AV+R HS  H+M +A++ +  +     G +++ D   +DF
Sbjct: 580 SGSLKVGEIVAAQVDGERRQAVMRNHSVTHLMHKALRLVLGDHVQQKGSLVDADKTRFDF 639

Query: 109 DKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK 168
             + P S DE+A++E+ + E I  ++    + +  ++A+ L           +L      
Sbjct: 640 AHDAPMSDDEIARVERLVNEEILANAATQARVMPIDEAKGL--------GAMMLFGEKYG 691

Query: 169 ENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
           + V +   G   +LC G HV  TG +  F
Sbjct: 692 DTVRVLDIGTSRELCGGTHVARTGDIGLF 720


>gi|255263093|ref|ZP_05342435.1| alanyl-tRNA synthetase [Thalassiobium sp. R2A62]
 gi|255105428|gb|EET48102.1| alanyl-tRNA synthetase [Thalassiobium sp. R2A62]
          Length = 884

 Score = 44.7 bits (104), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 72/159 (45%), Gaps = 12/159 (7%)

Query: 54  VREGSIEIITPE----DPRSLAVIR--HSCAHIMAEAV-QSIWPEVQVAIGPIIEDGFYY 106
           + +G+ E+ T      DP   + IR  HS  H++ EA+ QS+   V         D   +
Sbjct: 536 ITKGTFEVGTAVELNVDPTRRSQIRANHSATHLLHEALRQSLGDHVAQRGSLNAPDRLRF 595

Query: 107 DFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESK--KEAYKVEI-LE 163
           DF   +  S ++L  +E ++   I +++    + ++ + AREL       E Y  E+ + 
Sbjct: 596 DFSHGKALSLEQLQSVEAEVNAYIRQNTGVETRIMTPDDARELGAQALFGEKYGDEVRVV 655

Query: 164 SIPAKENVTLYRQGEWF--DLCRGPHVRSTGQVKKFFKL 200
           S+ A+ N      G  +  +LC G HV  TG +  F  L
Sbjct: 656 SMGAQPNSGRGSLGNTYSLELCGGTHVGRTGDIGAFVML 694


>gi|254450715|ref|ZP_05064152.1| alanyl-tRNA synthetase [Octadecabacter antarcticus 238]
 gi|198265121|gb|EDY89391.1| alanyl-tRNA synthetase [Octadecabacter antarcticus 238]
          Length = 884

 Score = 44.7 bits (104), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 34/139 (24%), Positives = 60/139 (43%), Gaps = 7/139 (5%)

Query: 66  DPRSLAVIR--HSCAHIMAEAVQSIWPEVQVAIGPI-IEDGFYYDFDKEQPFSSDELAQI 122
           DP   A IR  HS  H++ EA++    +  V  G +   D   +DF      +S EL Q+
Sbjct: 551 DPARRAAIRANHSATHLLNEALRVALGDHVVQRGSLNAADRLRFDFTHTGAMTSAELTQV 610

Query: 123 EKKMQEIIARDSPFLKQYLSHEKAREL----FESKKEAYKVEILESIPAKENVTLYRQGE 178
           E+ +   + +++    + ++ + AR +       +K   +V ++    AK          
Sbjct: 611 EQDVNRYVQQNTAVSTRIMTPDDARAIGAQALFGEKYGDEVRVVSMGRAKTGKGAEGLTY 670

Query: 179 WFDLCRGPHVRSTGQVKKF 197
             +LC G HV  TG +  F
Sbjct: 671 SLELCGGTHVARTGDIGMF 689


>gi|221068963|ref|ZP_03545068.1| prolyl-tRNA synthetase [Comamonas testosteroni KF-1]
 gi|220713986|gb|EED69354.1| prolyl-tRNA synthetase [Comamonas testosteroni KF-1]
          Length = 580

 Score = 44.7 bits (104), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 31/134 (23%), Positives = 62/134 (46%), Gaps = 7/134 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           G+G+  +   G ++ + + + +R ++ +    E   P V    LWQ++G ++     +  
Sbjct: 36  GAGIYNYMPMGLRVIRKVEAIVREEMNRAGAIETTMPVVQPAELWQETGRFEKMGPELLR 95

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           ++      +  R F ++P +      +     KSY++LP  L +  + +R+E      GL
Sbjct: 96  IQD-----RHGRDFVIQPTSEEVVTDIARQEFKSYKQLPKNLYQIQTKFRDERRPRF-GL 149

Query: 381 MRVRGFTQDDAHVF 394
           MR R F   DA+ F
Sbjct: 150 MRGREFIMKDAYSF 163


>gi|145224345|ref|YP_001135023.1| alanyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
 gi|315444677|ref|YP_004077556.1| alanyl-tRNA synthetase [Mycobacterium sp. Spyr1]
 gi|205830152|sp|A4TBW4|SYA_MYCGI RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|145216831|gb|ABP46235.1| alanyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
 gi|315262980|gb|ADT99721.1| alanyl-tRNA synthetase [Mycobacterium sp. Spyr1]
          Length = 898

 Score = 44.7 bits (104), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 59/137 (43%), Gaps = 9/137 (6%)

Query: 61  IITPEDPR--SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY-YDFDKEQPFSSD 117
           I+   DPR    A   HS  H++  A++ +     V  G +   G+  +DF+ +   S D
Sbjct: 566 IVAAVDPRWRHGATQGHSGTHMVHAALRQVLGPNAVQAGSLNRPGYLRFDFNWQGALSDD 625

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           + +QIE+   E +  D      Y  H    EL ++K         E+ P +  V      
Sbjct: 626 QRSQIEEVTNEAVEAD------YEVHNFTTELEKAKSMGAMALFGENYPDEVRVVEIGGP 679

Query: 178 EWFDLCRGPHVRSTGQV 194
              +LC G HVRS+ Q+
Sbjct: 680 FSIELCGGTHVRSSAQI 696


>gi|268679949|ref|YP_003304380.1| prolyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
 gi|268617980|gb|ACZ12345.1| prolyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
          Length = 567

 Score = 44.7 bits (104), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 33/138 (23%), Positives = 64/138 (46%), Gaps = 7/138 (5%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I + GSG+  +   G  +   + + ++ ++ +   +EI    V    LW+QSG +D +  
Sbjct: 32  IVQVGSGLYNFLPMGKIVLDKIRNVVKEEMDETGAQEIQMGVVSPAELWKQSGRYDVFGK 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            +  +K   +       F L P +    V +  + + SY++LP+ L +  + +R+E    
Sbjct: 92  ELCRIKDRKEN-----EFVLGPTHEEVVVDIVRNRINSYKQLPLHLYQITTKFRDEARPR 146

Query: 377 LHGLMRVRGFTQDDAHVF 394
             GL+R R F   D + F
Sbjct: 147 F-GLLRGREFIMKDGYSF 163


>gi|160880749|ref|YP_001559717.1| alanyl-tRNA synthetase [Clostridium phytofermentans ISDg]
 gi|205829959|sp|A9KMW7|SYA1_CLOPH RecName: Full=Alanyl-tRNA synthetase 1; AltName: Full=Alanine--tRNA
           ligase 1; Short=AlaRS 1
 gi|160429415|gb|ABX42978.1| alanyl-tRNA synthetase [Clostridium phytofermentans ISDg]
          Length = 879

 Score = 44.7 bits (104), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 67/138 (48%), Gaps = 21/138 (15%)

Query: 75  HSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++ +A++++    V+ A   +  +   +DF      + +E+A++E  + E IA++
Sbjct: 566 HSATHLLQKALRNVLGSHVEQAGSFVTSERLRFDFTHFSALTKEEIAKVEAMVNEEIAKN 625

Query: 134 SPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWF-DLCRGPH 187
            P +   +S E A++     LF  K               ++V +   G++  +LC G H
Sbjct: 626 VPVVTDVMSVEDAKKSGAMALFGEK-------------YGDSVRVVTMGDFSKELCGGTH 672

Query: 188 VRSTGQVKKFFKLMKVAG 205
           V +TG +   FK++  AG
Sbjct: 673 VANTGSI-TVFKILSEAG 689


>gi|126728909|ref|ZP_01744724.1| prolyl-tRNA synthetase [Sagittula stellata E-37]
 gi|126710839|gb|EBA09890.1| prolyl-tRNA synthetase [Sagittula stellata E-37]
          Length = 445

 Score = 44.7 bits (104), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 40/183 (21%), Positives = 79/183 (43%), Gaps = 11/183 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  +G+  W   G+K+ + + + +   + +  +  +  P +    LW++SG +++Y  
Sbjct: 32  IKQAQAGIYSWLPLGYKVLKKIENIVHEEQQRAGHIPLLMPTLQSADLWRESGRYEAYGE 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  +     T +  R     P N      +F   ++SY++LP+ L      +R+E    
Sbjct: 92  EMLRI-----TDRHGRDMLYGPTNEELITDIFRSYVRSYKDLPLTLYHIQWKFRDEVRPR 146

Query: 377 LHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
             G+MR R F   D + F  TKE   +   +     +  Y+  G + I ++    P   +
Sbjct: 147 F-GVMRGREFLMKDGYNFDLTKEDALHAYNRHLVSYLRTYERMGLQAIPMRADGGP---I 202

Query: 436 GSD 438
           G D
Sbjct: 203 GGD 205


>gi|325268831|ref|ZP_08135456.1| alanine--tRNA ligase [Prevotella multiformis DSM 16608]
 gi|324988803|gb|EGC20761.1| alanine--tRNA ligase [Prevotella multiformis DSM 16608]
          Length = 888

 Score = 44.7 bits (104), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 61/137 (44%), Gaps = 9/137 (6%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEK 124
           + R  +   H+  H++  A++ +  E     G  +  D   +D    Q  + +EL Q+EK
Sbjct: 569 EKRDASAANHTATHLLDYALKQVLGEHAEQKGSYVSPDTLRFDVSHFQKITDEELRQVEK 628

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
            + E+I +D P     L   +   L E+KK        E    K  V + R G   + C 
Sbjct: 629 IVNEMIRKDYP-----LDEHRDTPLEEAKKMGAVALFGEKYGDK--VRVVRFGPSCEFCG 681

Query: 185 GPHVRSTGQVKKFFKLM 201
           G H  STG++  FFK++
Sbjct: 682 GIHAASTGRI-GFFKIV 697


>gi|205830249|sp|A5UY81|SYA_ROSS1 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
          Length = 905

 Score = 44.7 bits (104), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 7/102 (6%)

Query: 54  VREGSIEIITPEDP-----RSLAVIR-HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYY 106
           V  GS+ +  P D      R  A++R H+  H++  A++ +  E     G ++  D   +
Sbjct: 542 VESGSVMLHDPVDAHVDSGRRAAIMRNHTATHLLHRALRDVLGEHAAQAGSLVAPDRLRF 601

Query: 107 DFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE 148
           DF   +P + ++L +IE+++   I  D+P + Q LS++ A E
Sbjct: 602 DFTHTRPLTPEQLHEIERRVNAWIRADTPVVWQELSYQAAIE 643


>gi|323495331|ref|ZP_08100409.1| prolyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
 gi|323310402|gb|EGA63588.1| prolyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
          Length = 571

 Score = 44.7 bits (104), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 38/162 (23%), Positives = 72/162 (44%), Gaps = 10/162 (6%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINT--PQVLDQHLWQQSGHWDSYRANMFA 320
           SG+  W   G ++ + + + +R++I D+   + T  P V    LW+++G     R+    
Sbjct: 37  SGLYTWLPTGLRVLRKVENIVRQEI-DNAGAVETLMPVVQPFELWEETG-----RSEKMG 90

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +    T +  R F L P       ++  + + SY++LP+ L +  + +R+E      G+
Sbjct: 91  PELLRFTDRHTRPFVLSPTAEEVITSLVRNEVSSYKQLPLNLYQIQTKFRDERRPRF-GV 149

Query: 381 MRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFE 421
           MR R F   DA+ F   K  +      +H+     +   G E
Sbjct: 150 MRAREFCMMDAYSFDIDKAGLEKSYQAMHDAYCKAFDRMGLE 191


>gi|150007636|ref|YP_001302379.1| prolyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503]
 gi|262381848|ref|ZP_06074986.1| prolyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
 gi|301310397|ref|ZP_07216336.1| proline--tRNA ligase [Bacteroides sp. 20_3]
 gi|166980137|sp|A6LAP3|SYP_PARD8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|149936060|gb|ABR42757.1| prolyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503]
 gi|262297025|gb|EEY84955.1| prolyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
 gi|300831971|gb|EFK62602.1| proline--tRNA ligase [Bacteroides sp. 20_3]
          Length = 493

 Score = 44.7 bits (104), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 64/290 (22%), Positives = 122/290 (42%), Gaps = 56/290 (19%)

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECL 405
            + + ++SYR+LP+   ++ +V R E    L   +R   F   + H    T+E+   E  
Sbjct: 134 TYRNWIQSYRDLPILCNQWANVMRWEMRTRL--FLRTAEFLWQEGHTAHATREEAEIEAK 191

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
           K+ +    +Y +F  E  M                   A  ++KGV      S  +R   
Sbjct: 192 KMQD----VYANFA-ENYM-------------------AMPVIKGV-----KSESERF-- 220

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIH 524
                 GA      E +++D  G+  Q GT   +  N    F+  +++ + +  +     
Sbjct: 221 -----AGALDTYTIEAMMQD--GKALQAGTSHFLGQNFGKAFDVTFIDKNGKSDYAWATS 273

Query: 525 RAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTITSSAVEYAQ---EIANL--- 574
              +G   R IG +I +   +    LP  L+PIQ ++  I  SA +  Q   ++A +   
Sbjct: 274 ---WGVSTRLIGALIMSHSDDNGLVLPPHLAPIQVVIVPIYRSAEQLTQISEKVAGIVAK 330

Query: 575 LKSHHLSIE-TDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRR 623
           LK+  +S++  D  N+   +K  E+ +K +P+ +  G ++    +I + R
Sbjct: 331 LKALGISVKYDDADNKKPGWKFAEYELKGVPVRLAMGGRDLENNTIEVMR 380


>gi|15639153|ref|NP_218599.1| prolyl-tRNA synthetase [Treponema pallidum subsp. pallidum str.
           Nichols]
 gi|189025393|ref|YP_001933165.1| prolyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14]
 gi|6094411|sp|O83195|SYP_TREPA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226701353|sp|B2S2A7|SYP_TREPS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|3322426|gb|AAC65149.1| prolyl-tRNA synthetase (proS) [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189017968|gb|ACD70586.1| prolyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14]
          Length = 617

 Score = 44.7 bits (104), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 51/134 (38%), Gaps = 7/134 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E   P V    LW++SG W    A +   K   D           P       A+     
Sbjct: 66  ECTAPVVTPAELWKESGRWYRMGAELLRAKNRLD-----HELLFSPTAEESFTALVRGDC 120

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLI 411
            SY+  P+ L +  + YR+E     +GLMR R FT  DA+ F T          K  +  
Sbjct: 121 TSYKHFPLSLYQINAKYRDEIRPR-YGLMRAREFTMADAYSFHTDCACLARTYEKFAHAY 179

Query: 412 ISIYKDFGFEKIMV 425
            +I++  G   I V
Sbjct: 180 RAIFRRIGLSVIAV 193


>gi|332229345|ref|XP_003263850.1| PREDICTED: 39S ribosomal protein L39, mitochondrial isoform 2
           [Nomascus leucogenys]
          Length = 353

 Score = 44.7 bits (104), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 43/191 (22%), Positives = 86/191 (45%), Gaps = 22/191 (11%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIR---HS 76
           +T    A  +S    +K++   ++G+  D+  P+ +   I+ +T +D     V +    S
Sbjct: 86  STPYSCAMHLSEWYCRKSILALVDGQPWDMYKPLTKSCEIKFLTFKDRDPGEVNKAYWRS 145

Query: 77  CAHIMAEAVQSIWPE------VQVAIGPIIEDGFYYD------FDKEQPFSSDELAQIEK 124
           CA +M   ++  + +      V+    P+I   F YD       D+  P + + L    K
Sbjct: 146 CAMMMGCVIERAFKDEYVVNLVRAPEVPVISGAFCYDVVLDSKLDEWMP-TKENLRSFTK 204

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN---VTLYRQGEWFD 181
               +I +D PF    +  + A E+F+  K  YK++ +E   ++ +   + L+R G++ D
Sbjct: 205 DAHALIYKDLPFETLEVEAKVALEIFQHNK--YKIDFIEEKASQNSERIIKLHRIGDFID 262

Query: 182 LCRGPHVRSTG 192
           +  GP +  T 
Sbjct: 263 VSEGPLIPRTS 273


>gi|291059576|gb|ADD72311.1| prolyl-tRNA synthetase [Treponema pallidum subsp. pallidum str.
           Chicago]
          Length = 619

 Score = 44.7 bits (104), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 51/134 (38%), Gaps = 7/134 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E   P V    LW++SG W    A +   K   D           P       A+     
Sbjct: 68  ECTAPVVTPAELWKESGRWYRMGAELLRAKNRLD-----HELLFSPTAEESFTALVRGDC 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLI 411
            SY+  P+ L +  + YR+E     +GLMR R FT  DA+ F T          K  +  
Sbjct: 123 TSYKHFPLSLYQINAKYRDEIRPR-YGLMRAREFTMADAYSFHTDCACLARTYEKFAHAY 181

Query: 412 ISIYKDFGFEKIMV 425
            +I++  G   I V
Sbjct: 182 RAIFRRIGLSVIAV 195


>gi|167753580|ref|ZP_02425707.1| hypothetical protein ALIPUT_01857 [Alistipes putredinis DSM 17216]
 gi|167658205|gb|EDS02335.1| hypothetical protein ALIPUT_01857 [Alistipes putredinis DSM 17216]
          Length = 847

 Score = 44.7 bits (104), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 35/144 (24%), Positives = 66/144 (45%), Gaps = 10/144 (6%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY-YDFDKEQPFSSD 117
           + ++ PE  R  A   H+  H+M EA++ +        G ++   +  +DF   Q  + +
Sbjct: 522 MAVVDPE-KRQAAANNHTATHLMHEALRKVLGTHVEQKGSLVTPEYLRFDFSHFQKVTHE 580

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           EL ++E+ +   I  + P        E+ R+  + +  A    +L      + V + R G
Sbjct: 581 ELRRVEQLVNRAIRANYPL-------EEKRDATKEEAAAAGAMMLFGEKYGDRVRMVRFG 633

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLM 201
              +LC G HV +TG +  FFK++
Sbjct: 634 TSVELCGGTHVSATGNI-GFFKIL 656


>gi|310815943|ref|YP_003963907.1| alanyl-tRNA synthetase [Ketogulonicigenium vulgare Y25]
 gi|308754678|gb|ADO42607.1| alanyl-tRNA synthetase [Ketogulonicigenium vulgare Y25]
          Length = 868

 Score = 44.7 bits (104), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 40/175 (22%), Positives = 76/175 (43%), Gaps = 7/175 (4%)

Query: 36  KKAVAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVA 95
           K A A A  G V +    V +G++ +      R      HS  H++ EA+++   +    
Sbjct: 549 KHAGAFAHIGTVREGFVAVGQGAV-LTVDATRRGQIAANHSATHLVNEALRAALGDHVAQ 607

Query: 96  IGPI-IEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESK- 153
            G +   D   +DF   +  S+DE+A+++  +   I +++P   + ++ ++AR+L     
Sbjct: 608 RGSLNAPDRLRFDFSHNKALSADEIAKVQADVNAYIRQNTPVETRVMTPDEARDLGAQAL 667

Query: 154 -KEAYKVEILESIPAK---ENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVA 204
             E Y  E+      +    N  + +     +LC G HV   G++  F  L   A
Sbjct: 668 FGEKYGDEVRVVSMGRLDGSNKGVDKNTYSLELCGGTHVTRLGEIGAFVLLSDSA 722


>gi|291400916|ref|XP_002716716.1| PREDICTED: mitochondrial ribosomal protein L39 [Oryctolagus
           cuniculus]
          Length = 744

 Score = 44.7 bits (104), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 89/192 (46%), Gaps = 24/192 (12%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIR---HS 76
           +T    A  +S    +K++   ++G+  D+  P+ +   IE +T +D     V +    S
Sbjct: 213 STPYSCAMHLSEWYCRKSILALVDGQPWDMYKPLTKSCEIEFLTFKDRDPGEVNKAYWRS 272

Query: 77  CAHIMAEAVQSIWPEVQVA--IG----PIIEDGFYYD------FDKEQPFSSDELAQIEK 124
           CA +M   ++  + +  V   +G    P+I   F YD       D+  P + + L    K
Sbjct: 273 CAMMMGCVIERAFKDEYVVSLVGAPEVPVIAGAFCYDVVLDKKLDEWMP-TKENLRSFTK 331

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN----VTLYRQGEWF 180
            +  +I +D PF    +  + A E+F+  K  YK++ +E   A +N    V L+R G++ 
Sbjct: 332 DVHALIYKDLPFETLEVEAKVALEIFQHNK--YKIDFIEEK-ASQNPERIVKLHRIGDFI 388

Query: 181 DLCRGPHVRSTG 192
           D+  GP +  TG
Sbjct: 389 DVSEGPLIPRTG 400


>gi|329954822|ref|ZP_08295839.1| proline--tRNA ligase [Bacteroides clarus YIT 12056]
 gi|328526926|gb|EGF53937.1| proline--tRNA ligase [Bacteroides clarus YIT 12056]
          Length = 497

 Score = 44.7 bits (104), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 65/289 (22%), Positives = 126/289 (43%), Gaps = 56/289 (19%)

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLK 406
           + + + SYR+LP+   ++ +V+R E    L   +R   F   + H    T+E+   E ++
Sbjct: 135 YKNWINSYRDLPILCNQWANVFRWEMRTRL--FLRTAEFLWQEGHTAHATREEAEEEAVR 192

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           + N    +Y +F  EK M                   A  ++KGV      S+ +R    
Sbjct: 193 MLN----VYGEFA-EKYM-------------------AVPVVKGV-----KSANERF--- 220

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
                GA      E +++D  G+  Q GT   +  N    F+  +VN  ++  +   +  
Sbjct: 221 ----AGALNTYTIEAMMQD--GKALQSGTSHFLGQNFAKAFDVQFVNKENKLEY---VWA 271

Query: 526 AVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTITSSAVEYA---QEIANL---L 575
             +G   R +G +I     +    LP  L+PIQ ++  I  +A   A   ++IA +   L
Sbjct: 272 TSWGVSTRLMGALIMTHSDDNGLVLPPHLAPIQVVIVPIYKNAEMLAKIDEKIAGIVAKL 331

Query: 576 KSHHLSIETD-FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRR 623
           KS  +S++ D   N+   +K  ++ +K +P+ ++ G ++    ++ + R
Sbjct: 332 KSMGISVKYDNADNKRPGFKFADYEVKGVPVRLVMGGRDLENNTMEVMR 380


>gi|326499774|dbj|BAJ86198.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 541

 Score = 44.7 bits (104), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 73/367 (19%), Positives = 138/367 (37%), Gaps = 59/367 (16%)

Query: 272 GWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G+ I++ +  Y+  K K+  +  +  PQ +     ++    ++     F+ + A  TI  
Sbjct: 100 GYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEK----EASHVEGFSPELAVVTIGG 155

Query: 331 LRTFALKPMNCPGHVAVFNH----GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
            +    K +  P    + NH     ++SYR+LP+ + ++ +V R E        +R   F
Sbjct: 156 GKELEEKLVVRPTSETIVNHMFTKWIQSYRDLPLMINQWANVTRWE--MRTKPFIRTLEF 213

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
              + H   T      E  K    +I +Y  F +E+  + +    + RV + A  D    
Sbjct: 214 LWQEGH---TAHATLEEAEKEAMQMIDVYTKFSYEQAAIPVIPGRKSRVETFAGADRTYT 270

Query: 447 IMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGR---DWQCGTIQVDFNLP 503
           I   + D      +  +  G     G  +   FE    D  G+    WQ       + + 
Sbjct: 271 IEAMMGD------KKALQAGTSHNLGQNFSRAFETQFMDENGQLEHVWQT-----SWAIS 319

Query: 504 SRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSS 563
           +RF    + +H +                   G+M       LP  ++PIQ ++  I   
Sbjct: 320 TRFVGGIIMTHGDDA-----------------GLM-------LPPRIAPIQVVIVPIWKK 355

Query: 564 A------VEYAQEIANLLKSHHLSIETDFRN-ETINYKIREHSIKKIPIIIICGDKEASE 616
                  +E    + N LK   + ++ D     T  +K   + +K +PI I  G ++   
Sbjct: 356 GDEKRVVMEAVASVQNTLKEAGIRVKVDNSELRTPGWKFNFYEMKGVPIRIELGPRDVKN 415

Query: 617 RSIGIRR 623
           RS+ + R
Sbjct: 416 RSVVLSR 422


>gi|269114905|ref|YP_003302668.1| Alanyl-tRNA synthetase (Alanine-tRNA ligase, AlaRS) [Mycoplasma
           hominis]
 gi|268322530|emb|CAX37265.1| Alanyl-tRNA synthetase (Alanine-tRNA ligase, AlaRS) [Mycoplasma
           hominis ATCC 23114]
          Length = 887

 Score = 44.7 bits (104), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 67/143 (46%), Gaps = 10/143 (6%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWP-EVQVAIGP-IIEDGFYYDFDKEQPFSS 116
           ++    ED R      HS  H+M  A++  +P E+   +G  I  + F +DF  +   + 
Sbjct: 542 VQCFVDEDKRINFARNHSSTHLMFSALRETYPNEIIKQLGSNITYEHFTFDFGLDHRPTK 601

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENV--TLY 174
           +E+  IE KM++ IARD        S +KA E+      AY + I ES     N    + 
Sbjct: 602 EEIKLIEHKMRQYIARDVKRNYIITSLKKAEEM-----GAY-MTIDESEYHDANYIRVVE 655

Query: 175 RQGEWFDLCRGPHVRSTGQVKKF 197
            +G   DLC G HV  +G ++ F
Sbjct: 656 FEGITKDLCGGTHVPHSGIIEDF 678


>gi|320536417|ref|ZP_08036454.1| alanyl-tRNA synthetase [Treponema phagedenis F0421]
 gi|320146727|gb|EFW38306.1| alanyl-tRNA synthetase [Treponema phagedenis F0421]
          Length = 600

 Score = 44.7 bits (104), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 64/130 (49%), Gaps = 20/130 (15%)

Query: 75  HSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           H+  H++ +A++ +  + V+     I  +   +DF   +P + +E A++E+ + E I  D
Sbjct: 463 HTATHLLHKALRMVLGDHVEQKGSNITAERLRFDFSHPKPMTPEEKAEVERIVNEQIQAD 522

Query: 134 SPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWF-DLCRGPH 187
            P   + +S ++A++     LF  K E             ++V +Y  G +  ++C GPH
Sbjct: 523 LPVSFEVMSLDEAKKSGAMALFGEKYE-------------DSVKVYSIGSFSKEVCGGPH 569

Query: 188 VRSTGQVKKF 197
           V  TGQ+  F
Sbjct: 570 VEHTGQLGHF 579


>gi|313681998|ref|YP_004059736.1| prolyl-tRNA synthetase [Sulfuricurvum kujiense DSM 16994]
 gi|313154858|gb|ADR33536.1| prolyl-tRNA synthetase [Sulfuricurvum kujiense DSM 16994]
          Length = 567

 Score = 44.7 bits (104), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 27/105 (25%), Positives = 49/105 (46%), Gaps = 6/105 (5%)

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
           D +E++   V    LW++SG  + +   +   +   D +     F L P +    V +  
Sbjct: 65  DAQEVDLSFVTPAELWEESGRIEKFGKELLRFRDRKDNL-----FVLGPTHEEMMVNIVR 119

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           + + SY++LP+ L +  + +R+E      GLMR R F   D + F
Sbjct: 120 NRVTSYKQLPLNLYQIKTKFRDEARPRF-GLMRGREFVMKDGYSF 163


>gi|312212761|emb|CBX92844.1| similar to prolyl-tRNA synthetase [Leptosphaeria maculans]
          Length = 610

 Score = 44.7 bits (104), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 59/127 (46%), Gaps = 11/127 (8%)

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +  + LW+QSG    Y AN   ++  D   +    F L P +     A+    + SY++L
Sbjct: 115 ITTEALWRQSGR---YSANSELLRIND---RKESGFLLSPTHEEEITALVASTVHSYKDL 168

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RL + G  YR+E      GL+R + F   D + F T     N  LK +  +   Y + 
Sbjct: 169 PLRLYQIGRKYRDE-RRPRQGLLRAKEFMMKDLYTFDTDA---NAALKTYEQVRQAYNNL 224

Query: 419 GFEKIMV 425
            F+++ +
Sbjct: 225 -FDELRI 230


>gi|294495367|ref|YP_003541860.1| glycyl-tRNA synthetase [Methanohalophilus mahii DSM 5219]
 gi|292666366|gb|ADE36215.1| glycyl-tRNA synthetase [Methanohalophilus mahii DSM 5219]
          Length = 585

 Score = 44.7 bits (104), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 3/89 (3%)

Query: 336 LKPMNCPGHVAVFNHGLKSYRE-LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           L+P    G    F    + YRE LP  + + G  YRNE S    G++R+R FTQ +A +F
Sbjct: 158 LRPETAQGIFIDFQRLARYYREKLPFGVTQIGKSYRNEIS-PRQGVIRLREFTQAEAEIF 216

Query: 395 C-TKEQMFNECLKIHNLIISIYKDFGFEK 422
              +E+   E   + N +I +Y D   E+
Sbjct: 217 IHPQEKKHPEIAAVENDLIILYSDKAQER 245


>gi|313473046|ref|ZP_07813533.1| serine--tRNA ligase [Lactobacillus jensenii 1153]
 gi|313448839|gb|EEQ67733.2| serine--tRNA ligase [Lactobacillus jensenii 1153]
          Length = 423

 Score = 44.7 bits (104), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 38/180 (21%), Positives = 73/180 (40%), Gaps = 7/180 (3%)

Query: 256 FHIAEDGSGVIFWHRKGWKIFQTLISY---MRRKIKDDYEEINTPQVLDQHLWQQSGHWD 312
           F  A   SG  F + KG         Y   +    K+ Y E+  P +++    Q +G + 
Sbjct: 140 FDTAAKVSGARFVYYKGAGALLERAVYNFFLDENTKEGYTEVIPPYLVNDDSMQGTGQFP 199

Query: 313 SYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE 372
            +  +++ +   DD  K L    +     P  V  F   +   ++LP+ +      +R+E
Sbjct: 200 KFTEDVYTIVDNDDPDKPLNLTLIPTAEVP-LVNYFRGDIVDGKKLPINVTALTPAFRSE 258

Query: 373 PSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
              +     GL+R+  F + +    C  E+ +NE  ++ +    + +  G    +V LST
Sbjct: 259 AGSAGRDTRGLIRMHQFNKVEMVKVCKPEESWNELDRLTHNAEHLLQKLGLPYHVVALST 318


>gi|293402254|ref|ZP_06646392.1| phosphoribulokinase family protein [Erysipelotrichaceae bacterium
           5_2_54FAA]
 gi|291304361|gb|EFE45612.1| phosphoribulokinase family protein [Erysipelotrichaceae bacterium
           5_2_54FAA]
          Length = 570

 Score = 44.7 bits (104), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 30/159 (18%), Positives = 74/159 (46%), Gaps = 2/159 (1%)

Query: 40  AVAINGKVCDLSDPVRE-GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP 98
           A+  NGK+ D+   ++E G +  +  +      +   S + +   AV  ++P+  V I  
Sbjct: 65  AIVFNGKLHDVKYCLKEEGDLSFVYADSEIGKQIYERSLSFLFIAAVHRLYPKAHVCIEH 124

Query: 99  IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYK 158
            + +G + + +++   + +++ QIE+ M+++   +   L+  +  ++A   FE+    +K
Sbjct: 125 ALSNGLFCEVEQQSYLTPEDVFQIEQTMKQMTREELAILRSVVPTKEAVAFFEACGMLHK 184

Query: 159 VEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
             +L +    E  ++Y   +  D   G  + +T  +  F
Sbjct: 185 ASLLRN-RHSETSSIYHLEDVNDYFYGIMLPNTSYLTHF 222


>gi|154497721|ref|ZP_02036099.1| hypothetical protein BACCAP_01697 [Bacteroides capillosus ATCC
           29799]
 gi|150273219|gb|EDN00364.1| hypothetical protein BACCAP_01697 [Bacteroides capillosus ATCC
           29799]
          Length = 890

 Score = 44.7 bits (104), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 71/157 (45%), Gaps = 14/157 (8%)

Query: 43  INGKVCDLSDPVREGSIEIITPEDPRSLAVIR-HSCAHIMAEAVQSIWPE-VQVAIGPII 100
           + G V  L D V   SI++      R  A++R HS  H++ +A++++  + VQ A   + 
Sbjct: 548 LTGGVIKLGDTV-SASIDV-----KRRKAIMRAHSATHLLDKALRTVLGDHVQQAGSLVE 601

Query: 101 EDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVE 160
           ED   +DF      +++EL+Q+   + E +      L+ Y  H     + E+KK+     
Sbjct: 602 EDRLRFDFTHFSAMTAEELSQVSAMVNEAV------LEGYDVHTDVLPIEEAKKKGAIAL 655

Query: 161 ILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
             E       V    +G   + C G H+ +T +V  F
Sbjct: 656 FGEKYGDTVRVVDMGEGYSVEFCGGTHLDNTAKVGVF 692


>gi|168182642|ref|ZP_02617306.1| alanine--tRNA ligase [Clostridium botulinum Bf]
 gi|237796002|ref|YP_002863554.1| alanyl-tRNA synthetase [Clostridium botulinum Ba4 str. 657]
 gi|182674085|gb|EDT86046.1| alanine--tRNA ligase [Clostridium botulinum Bf]
 gi|229262453|gb|ACQ53486.1| alanine--tRNA ligase [Clostridium botulinum Ba4 str. 657]
          Length = 879

 Score = 44.7 bits (104), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 37/149 (24%), Positives = 74/149 (49%), Gaps = 21/149 (14%)

Query: 65  EDPRSLAVIRHSCAHIM-AEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           E+ R+     H+  HI+ A  ++ +   VQ +   + ++   +DF   +  S DEL ++E
Sbjct: 556 EERRNNIRKNHTATHILHAALIKVVGDHVQQSGSYVDDERLRFDFSHFEAVSEDELKEVE 615

Query: 124 KKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGE 178
           K + + I + +    + ++ E+A+E     LF++K              K++V +   G+
Sbjct: 616 KIVNKEIMKANAVNTKVMNIEEAKEQGAIALFDNK-------------YKDDVRVVSVGD 662

Query: 179 WF-DLCRGPHVRSTGQVKKFFKLMKVAGA 206
           +  +LC G HV ++GQ+   FK++  AG 
Sbjct: 663 FSKELCGGTHVSNSGQI-GMFKIVSEAGV 690


>gi|115768438|ref|XP_784410.2| PREDICTED: similar to mitochondrial ribosomal protein L39, partial
           [Strongylocentrotus purpuratus]
          Length = 237

 Score = 44.7 bits (104), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 44/171 (25%), Positives = 79/171 (46%), Gaps = 19/171 (11%)

Query: 36  KKAVAVAINGKVCDLSDPVREGS-IEIITPEDPRSLAVIR---HSCAHIMAEAVQSIWPE 91
           K++    +NG+   +  P+ E   + +IT +D       +    SC+ +    +QS +  
Sbjct: 7   KRSAIALVNGQPWHMLQPLTEDCELRLITMKDDEPTEANKAFWRSCSLMAGAILQSAFKT 66

Query: 92  ------VQVAIGPIIEDGFYYDFDKEQPF----SSDELAQIEKKMQEIIARDSPFLKQYL 141
                 V+ A  P+ +  F YD +   PF    S +EL  + +   E+  +  PF +  +
Sbjct: 67  DVYIQPVRAADIPVSQGCFAYDVNL--PFQWEPSQEELTSLSRLSYELAEKKLPFERIEV 124

Query: 142 SHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTG 192
               A E+F  K   YKV  L S+ A + + L+R G++ D  +GP V ++G
Sbjct: 125 RPSVAMEIF--KDNEYKVAELNSMDA-DRLVLFRLGQFIDTSQGPLVANSG 172


>gi|332231899|ref|XP_003265132.1| PREDICTED: bifunctional aminoacyl-tRNA synthetase [Nomascus
            leucogenys]
          Length = 1512

 Score = 44.7 bits (104), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 70/320 (21%), Positives = 125/320 (39%), Gaps = 58/320 (18%)

Query: 334  FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH- 392
             A++P +       +   ++S+R+LP++L ++ +V R E        +R R F   + H 
Sbjct: 1116 IAIRPTSETVMYPAYAKWVQSHRDLPIKLNQWCNVVRWEFKHP-QPFLRTREFLWQEGHS 1174

Query: 393  VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
             F T E+   E L+I +L   +Y++     ++    T  EK  G D             +
Sbjct: 1175 AFATMEEAAEEVLQILDLYAQVYEELLAIPVVKGRKTEKEKFAGGD---------YTTTI 1225

Query: 453  DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
            +   ++S   I  G     G  +   FE + +D                 P      Y N
Sbjct: 1226 EAFISASGRAIQGGTSHHLGQNFSKMFEIVFEDP--------------KTPGEKQFAYQN 1271

Query: 513  SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTT------ITSSAVE 566
            S              +G   R IG+M      N+ L L P  A V        IT++  E
Sbjct: 1272 S--------------WGLTTRTIGVMTMVHGDNMGLVLPPRVACVQVVIIPCGITNALSE 1317

Query: 567  YAQE--IANL------LKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKE-ASE 616
              +E  IA        L S ++ +  D R N +  +K     +K +PI +  G ++  S 
Sbjct: 1318 EDKEALIAKCNDYRRRLLSVNIRVRADLRDNYSPGWKFNHWELKGVPIRLEVGPRDMKSC 1377

Query: 617  RSIGIRRFGSTTTQKVSLLD 636
            + + +RR    T +K+++++
Sbjct: 1378 QFVAVRR---DTGEKLTVVE 1394


>gi|330833399|ref|YP_004402224.1| hypothetical protein SSUST3_1623 [Streptococcus suis ST3]
 gi|329307622|gb|AEB82038.1| hypothetical protein SSUST3_1623 [Streptococcus suis ST3]
          Length = 424

 Score = 44.7 bits (104), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 44/213 (20%), Positives = 89/213 (41%), Gaps = 24/213 (11%)

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFH----IAEDGSGVIFWHRKGWKIFQTLI 280
           W T +E T         E + H  L  ++D+          G+  +F+   G ++ + L 
Sbjct: 127 WGTPREFT--------FEPKAHWDLGEDLDILDWERGAKVTGARFLFYKNLGARLERALY 178

Query: 281 SYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPM 339
           ++M    I + Y+EI TP +++ +    +G +  ++ + F +    DT      F L P 
Sbjct: 179 NFMLDEHIAEGYQEIITPYMVNHNSMFGTGQYPKFKEDTFELA---DT-----NFVLIPT 230

Query: 340 NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCT 396
                   + + +   ++LP+        +R+E   +     GL+R+  F + +   F T
Sbjct: 231 AEVPLTNYYRNEILEEKDLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAT 290

Query: 397 KEQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
            EQ ++E  K+     +I +  G    ++ L T
Sbjct: 291 PEQSYDELEKMTANAENILQKLGLPYRVLALCT 323


>gi|154499081|ref|ZP_02037459.1| hypothetical protein BACCAP_03073 [Bacteroides capillosus ATCC
           29799]
 gi|150271921|gb|EDM99147.1| hypothetical protein BACCAP_03073 [Bacteroides capillosus ATCC
           29799]
          Length = 497

 Score = 44.7 bits (104), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 74/384 (19%), Positives = 149/384 (38%), Gaps = 59/384 (15%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK 322
           G+  +   G+ I++ +   +  + K   +E ++ P ++ + L Q+    +      FA +
Sbjct: 57  GMFIYRPYGYAIWENIQKELDARFKATGHENVSLPMLIPESLLQK----EKDHVEGFAPE 112

Query: 323 CADDTI----KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLH 378
           CA  T+    K    + ++P +       + + + S+R+LP    ++ SV R E +    
Sbjct: 113 CAWVTMGGSEKLEERYCIRPTSETLFCEHYKNIIHSWRDLPKLYNQWCSVLRWEKTS--R 170

Query: 379 GLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD 438
             +R R F   + H   T      E  +    +++IY DF                    
Sbjct: 171 PFLRHREFLWQEGH---TMHATEEEAREETKRMLNIYADF-------------------- 207

Query: 439 ALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ- 497
                 EN++   +   + + +++ N       GA      E ++ D   +  Q GT   
Sbjct: 208 -----LENVLAMPVVKGRKTDKEKFN-------GAEETYTVECMMHDK--KALQAGTSHY 253

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPI 553
                   F+  +    ++  HP   H+  +G   R IG +I     N    LP  ++PI
Sbjct: 254 FGDGFAKAFDITFTGKDNQLHHP---HQTSWGVSTRMIGGLIMTHGDNNGLVLPPRIAPI 310

Query: 554 QAIVTTITS---SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           Q I+  +       +E  Q + + L      ++ D  +++  +K  E+ +K +P+ +  G
Sbjct: 311 QVIIIPVAQHKPGVIEANQAVMDRLIKAGFRVKMDDSDQSAGWKFAEYEMKGVPLRLELG 370

Query: 611 DKEASERSIGIRRFGSTTTQKVSL 634
            K+  +    + R  S     VSL
Sbjct: 371 PKDIEKNQCVLARRDSGEKSFVSL 394


>gi|33337737|gb|AAQ13505.1|AF109357_1 MSTP003 [Homo sapiens]
 gi|38014060|gb|AAH04896.2| MRPL39 protein [Homo sapiens]
          Length = 333

 Score = 44.7 bits (104), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 86/192 (44%), Gaps = 24/192 (12%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIR---HS 76
           +T    A  +S    +K++   ++G+  D+  P+ +   I+ +T +D     V +    S
Sbjct: 81  STPYSCAMHLSEWYCRKSILALVDGQPWDMYKPLTKSCEIKFLTFKDCDPGEVNKAYWRS 140

Query: 77  CAHIMAEAVQSIWPE------VQVAIGPIIEDGFYYD------FDKEQPFSSDELAQIEK 124
           CA +M   ++  + +      V+    P+I   F YD       D+  P + + L    K
Sbjct: 141 CAMMMGCVIERAFKDEYMVNLVRAPEVPVISGAFCYDVVLDSKLDEWMP-TKENLRSFTK 199

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN----VTLYRQGEWF 180
               +I +D PF    +  + A E+F+  K  YKV+ +E   A +N    V L+R G++ 
Sbjct: 200 DAHALIYKDLPFETLEVEAKVALEIFQHSK--YKVDFIEE-KASQNPERIVKLHRIGDFI 256

Query: 181 DLCRGPHVRSTG 192
           D+  GP +  T 
Sbjct: 257 DVSEGPLIPRTS 268


>gi|282852800|ref|ZP_06262141.1| serine--tRNA ligase [Lactobacillus gasseri 224-1]
 gi|282555908|gb|EFB61529.1| serine--tRNA ligase [Lactobacillus gasseri 224-1]
          Length = 436

 Score = 44.7 bits (104), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 44/197 (22%), Positives = 87/197 (44%), Gaps = 11/197 (5%)

Query: 242 EKRDHRKLAREMDLFH--IAEDGSGVIFWHRKG-WKIFQTLIS--YMRRKIKDDYEEINT 296
           E + H ++  E+++     A   SG  F + KG   + +  +S  ++    KD Y E+  
Sbjct: 136 EPKPHWEIGTELNILDWDTAAKVSGARFVYYKGAGALLERAVSNFFLDENTKDGYTEVIP 195

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +++    Q +G +  +  +++ +   DD  K  R   L P      V  F   +   +
Sbjct: 196 PYLVNDASMQGTGQFPKFTEDVYTIVDNDDPDKP-RDLTLIPTAEVPLVNYFRGKILDAK 254

Query: 357 ELPVRLAEFGSVYRNEPSGS----LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
           +LP+ +  F   +R+E SGS      GL+R+  F + +      ++  ++E  K+ +   
Sbjct: 255 QLPINVTAFSPAFRSE-SGSAGRDTRGLIRMHEFRKVEMVKIVDEDSSWDELEKLTHNAE 313

Query: 413 SIYKDFGFEKIMVKLST 429
            + +  G    +V LST
Sbjct: 314 HLLQKLGLPYHVVALST 330


>gi|157364647|ref|YP_001471414.1| alanyl-tRNA synthetase [Thermotoga lettingae TMO]
 gi|205830273|sp|A8F866|SYA_THELT RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|157315251|gb|ABV34350.1| alanyl-tRNA synthetase [Thermotoga lettingae TMO]
          Length = 858

 Score = 44.7 bits (104), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 37/152 (24%), Positives = 67/152 (44%), Gaps = 21/152 (13%)

Query: 54  VREGS-IEIITPEDPRSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKE 111
           ++EG+ + +I   + R      H+  H++  A++ +    V+ A   +  +   +DF   
Sbjct: 528 LKEGTKVRLIVDREKRLSTARNHTATHLLHAALRKVLGTHVKQAGSLVTPEKLRFDFTHH 587

Query: 112 QPFSSDELAQIEKKMQEIIARDSPFLKQYLSH-----EKARELF-ESKKEAYKVEILESI 165
           +P + +EL  IE  + EII R  P + +  S+     E A  LF E   +  +V  + S 
Sbjct: 588 KPLTDNELMSIENMVNEIILRSIPVITEEKSYKEAVAEGAIALFGEKYGDVVRVVKVHSF 647

Query: 166 PAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
                          +LC G HV++TG +  F
Sbjct: 648 SE-------------ELCGGTHVKNTGNIGLF 666


>gi|27380861|ref|NP_772390.1| alanyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110]
 gi|27354027|dbj|BAC51015.1| alanyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110]
          Length = 894

 Score = 44.7 bits (104), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 32/133 (24%), Positives = 61/133 (45%), Gaps = 7/133 (5%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKM 126
           RS     HS  H++ EA++ +  +     G ++  D   +DF   +P +++ELA++E   
Sbjct: 560 RSSIRAHHSATHLIHEALRQVLGDHIAQRGSMVAPDRLRFDFVHPKPITAEELARVEDIA 619

Query: 127 QEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
            +++  +     + +  ++ARE     LF  +K   +V ++              G   +
Sbjct: 620 NDVVLENDEVTTRVMGVDEAREAGARALF-GEKYGDEVRVVSMGRTARERGANALGWSVE 678

Query: 182 LCRGPHVRSTGQV 194
           LC G HVR TG +
Sbjct: 679 LCGGTHVRRTGDI 691


>gi|312875971|ref|ZP_07735960.1| alanyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
 gi|311797169|gb|EFR13509.1| alanyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
          Length = 883

 Score = 44.7 bits (104), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 47/196 (23%), Positives = 87/196 (44%), Gaps = 32/196 (16%)

Query: 54  VREGSIEIITP------EDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYY 106
           V +G I +++       E+ R   +  H+  H++  A++ I  +  Q +   +  D   +
Sbjct: 537 VLKGEISVLSSVVAKVDEELRLATMKNHTATHLLHSALRKILGQHAQQSGSQVTPDRLRF 596

Query: 107 DFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEI 161
           DF   +P S +++ +IEK +  +I +  P  K     + A +     LF+ K        
Sbjct: 597 DFAHYEPLSEEQIIEIEKMVNNVIQQAIPVEKIVTDLDSALKMGATALFDEKYSNV---- 652

Query: 162 LESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKFFKLM---KVAGAYWRGDSNRPML 217
                    V + + G++  +LC G HV +TGQ+   FK++    VA    R ++     
Sbjct: 653 ---------VRVIKIGDFSMELCGGTHVDNTGQI-GMFKIISESSVAAGVRRIEAITG-- 700

Query: 218 SRIYGTAWNTQQELTQ 233
           +++Y    NTQQ L Q
Sbjct: 701 NKVYEFILNTQQTLKQ 716


>gi|238855568|ref|ZP_04645871.1| serine--tRNA ligase [Lactobacillus jensenii 269-3]
 gi|260665157|ref|ZP_05866007.1| seryl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
 gi|282932346|ref|ZP_06337781.1| serine--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|238831852|gb|EEQ24186.1| serine--tRNA ligase [Lactobacillus jensenii 269-3]
 gi|260561211|gb|EEX27185.1| seryl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
 gi|281303567|gb|EFA95734.1| serine--tRNA ligase [Lactobacillus jensenii 208-1]
          Length = 435

 Score = 44.7 bits (104), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 38/180 (21%), Positives = 73/180 (40%), Gaps = 7/180 (3%)

Query: 256 FHIAEDGSGVIFWHRKGWKIFQTLISY---MRRKIKDDYEEINTPQVLDQHLWQQSGHWD 312
           F  A   SG  F + KG         Y   +    K+ Y E+  P +++    Q +G + 
Sbjct: 152 FDTAAKVSGARFVYYKGAGALLERAVYNFFLDENTKEGYTEVIPPYLVNDDSMQGTGQFP 211

Query: 313 SYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE 372
            +  +++ +   DD  K L    +     P  V  F   +   ++LP+ +      +R+E
Sbjct: 212 KFTEDVYTIVDNDDPDKPLNLTLIPTAEVP-LVNYFRGDIVDGKKLPINVTALTPAFRSE 270

Query: 373 PSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
              +     GL+R+  F + +    C  E+ +NE  ++ +    + +  G    +V LST
Sbjct: 271 AGSAGRDTRGLIRMHQFNKVEMVKVCKPEESWNELDRLTHNAEHLLQKLGLPYHVVALST 330


>gi|42779094|ref|NP_976341.1| seryl-tRNA synthetase [Bacillus cereus ATCC 10987]
 gi|67461814|sp|Q73FJ3|SYS_BACC1 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|42735009|gb|AAS38949.1| seryl-tRNA synthetase [Bacillus cereus ATCC 10987]
          Length = 424

 Score = 44.7 bits (104), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 35/153 (22%), Positives = 66/153 (43%), Gaps = 13/153 (8%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDD--YEEINTPQVLDQHLWQQSGHWDSYRANMF 319
           GS  +F+   G ++ + LIS+M     D+  YEE+  P ++++     +G    +  + F
Sbjct: 160 GSRFVFYKGAGARLERALISFMLDLHTDEHGYEEVLPPYMVNRASMTGTGQLPKFEEDAF 219

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS--- 376
            ++  D        + L P        +    + +  +LP+R A F S +R+E   +   
Sbjct: 220 RIESED--------YFLIPTAEVPVTNMHRDEILNKEQLPIRYAAFSSCFRSEAGSAGRD 271

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
             GL+R   F + +   F   E  + E  K+ N
Sbjct: 272 TRGLIRQHQFNKVELVKFVKPEDSYEELEKLXN 304


>gi|2501044|sp|P78600|SYPC_CANAL RecName: Full=Prolyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Proline--tRNA ligase; Short=ProRS
 gi|1845347|gb|AAC49876.1| prolyl-tRNA synthetase [Candida albicans]
          Length = 575

 Score = 44.7 bits (104), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 42/173 (24%), Positives = 79/173 (45%), Gaps = 22/173 (12%)

Query: 255 LFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDS 313
           L +I    +G++ W + G  I   +   +R+++ +  +EE++   +  + LW+ +  WD 
Sbjct: 39  LGYITYPRAGLVNWSKMGLLIQNKISQIIRQRMDEIQFEEVSLSLISHKELWKLTNRWD- 97

Query: 314 YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE- 372
            +  +F  K   D    + T   +  N      V    L+SY+  P+ L +    +RNE 
Sbjct: 98  -QEEIF--KLVGDEYLLVPTAEEEITN-----YVKKQFLESYKNFPLALYQINPKFRNEK 149

Query: 373 -PSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS----IYKDFGF 420
            P G   GL+R + F   DA+ F   E   +E +K +  ++     I++D G 
Sbjct: 150 RPRG---GLLRGKEFLMKDAYSFDLNE---SEAMKTYEKVVGAYHKIFQDLGI 196


>gi|325298491|ref|YP_004258408.1| Threonyl/alanyl tRNA synthetase SAD [Bacteroides salanitronis DSM
           18170]
 gi|324318044|gb|ADY35935.1| Threonyl/alanyl tRNA synthetase SAD [Bacteroides salanitronis DSM
           18170]
          Length = 152

 Score = 44.7 bits (104), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 31/126 (24%), Positives = 62/126 (49%), Gaps = 13/126 (10%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDS 134
           H+C HI+   + +++   +     I       DF   Q  S +++A+IE ++ E IAR  
Sbjct: 18  HTCEHIVNRTMVNLFGCGRAVSAHIERKKSKLDFALPQAPSPEDIARIEAQVNETIARHL 77

Query: 135 PFLKQYLSHEKARELFESKKEAYKVEILESIP--AKENVTLYRQGEWFD-LCRGPHVRST 191
           P   ++++ ++A   F+ K+          +P  A + V + + G++ + LC G HV +T
Sbjct: 78  PVTTEFITQQEALGRFDLKR----------LPEGASDTVRIVKVGDYDECLCIGLHVANT 127

Query: 192 GQVKKF 197
            ++  F
Sbjct: 128 SEIGTF 133


>gi|310793744|gb|EFQ29205.1| prolyl-tRNA synthetase [Glomerella graminicola M1.001]
          Length = 566

 Score = 44.7 bits (104), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 10/141 (7%)

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +  + LWQ+SG        +F+    DD  +    + L P +      +    +KSY+EL
Sbjct: 53  ITSKDLWQKSGRLSQLEPELFSF---DD--RRGAKYMLSPTHEEEITTLVAKTVKSYKEL 107

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD- 417
           P+RL +    +R+E     +GL+R R FT  D + F   +      L+ +N + S Y   
Sbjct: 108 PLRLYQITRKFRDELR-PRYGLLRTREFTMKDLYTF---DASAEAALETYNKVQSAYAGV 163

Query: 418 FGFEKIMVKLSTRPEKRVGSD 438
           F   K+ V ++      +G D
Sbjct: 164 FNALKLPVLVARASSGDMGGD 184


>gi|160899488|ref|YP_001565070.1| alanyl-tRNA synthetase [Delftia acidovorans SPH-1]
 gi|205830045|sp|A9C0B9|SYA_DELAS RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|160365072|gb|ABX36685.1| alanyl-tRNA synthetase [Delftia acidovorans SPH-1]
          Length = 874

 Score = 44.7 bits (104), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 34/139 (24%), Positives = 66/139 (47%), Gaps = 10/139 (7%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKM 126
           R+  +  HS  HIM +A++ +  + VQ     +  +   +DF   QP +++E+ +IE+++
Sbjct: 557 RAATMRNHSVTHIMHKALREVLGDHVQQKGSLVNAERTRFDFAHNQPVTAEEIREIERRV 616

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGP 186
              I  ++P   + +  E A+        A    +L      ++V +   G   +LC G 
Sbjct: 617 NAEILANTPTDARVMDIESAK--------ATGAMMLFGEKYGDSVRVLDIGSSRELCGGT 668

Query: 187 HVRSTGQVKKFFKLMKVAG 205
           HV+ TG +   FK++   G
Sbjct: 669 HVQRTGDI-GLFKVVGEGG 686


>gi|322697644|gb|EFY89422.1| prolyl-tRNA synthetase [Metarhizium acridum CQMa 102]
          Length = 506

 Score = 44.7 bits (104), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 54/122 (44%), Gaps = 11/122 (9%)

Query: 299 VLDQHLWQQSGHWD--SYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           +  + LW++SG  D  S  A +F +     T +      L P +      +    LKS++
Sbjct: 14  ITSEELWRRSGRLDRVSSEAQLFRL-----TDRKQVPIMLSPTHEEEITTLVASALKSFK 68

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +LP+RL +    YR+E     HGL+R R F   D + F T    F   +  +  +   Y+
Sbjct: 69  DLPLRLYQTTRKYRDE-MRPRHGLLRSREFIMKDLYTFDTS---FESAIDTYKCVSRAYR 124

Query: 417 DF 418
            F
Sbjct: 125 AF 126


>gi|225181972|ref|ZP_03735405.1| alanyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
 gi|225167334|gb|EEG76152.1| alanyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
          Length = 872

 Score = 44.7 bits (104), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 36/142 (25%), Positives = 68/142 (47%), Gaps = 15/142 (10%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKM 126
           RS     H+  H++  A+Q +  E V+ A   +  D   +DF      + ++LA++E+K+
Sbjct: 552 RSSICRNHTATHLIHTALQEVLGEHVKQAGSLVTPDRLRFDFTNLSAATPEQLAEVEQKV 611

Query: 127 QEIIARDSPFLKQYLSHEKARELFESK--KEAYKVEILESIPAKENVTLYRQGEW-FDLC 183
            E I  + P      S ++A+++  +    E Y           + V + R G++  +LC
Sbjct: 612 NEKIWANEPVSVTLASLDEAKDMGATALFDEKY----------GDAVRIVRVGDYSMELC 661

Query: 184 RGPHVRSTGQVKKFFKLMKVAG 205
            G HV+S G++    K++  AG
Sbjct: 662 GGTHVQSAGEI-GLLKIVSEAG 682


>gi|86138530|ref|ZP_01057103.1| prolyl-tRNA synthetase [Roseobacter sp. MED193]
 gi|85824590|gb|EAQ44792.1| prolyl-tRNA synthetase [Roseobacter sp. MED193]
          Length = 451

 Score = 44.7 bits (104), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 40/183 (21%), Positives = 76/183 (41%), Gaps = 11/183 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  +G+  W   G+K+ + L   +   + +  +  +  P +    LW++SG +D Y  
Sbjct: 32  IKQSSAGIYSWLPLGFKVLKKLEGIVHEEQQRAGHMPMLMPTIQSADLWRESGRYDDYGQ 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  V+      +  R     P        +F   + SY++LP+ + +    +R+E    
Sbjct: 92  EMLRVED-----RHGRDMLFTPTAEELITDIFRAHVSSYKDLPLTMYQIQWKFRDEIRPR 146

Query: 377 LHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
             G+MR R F   D + F  TKE   +   +     +  Y+  G + I ++    P   +
Sbjct: 147 F-GVMRGREFYMKDGYNFDLTKEDALHAYNRHLVTYLRTYERMGLQAIPMRADGGP---I 202

Query: 436 GSD 438
           G D
Sbjct: 203 GGD 205


>gi|205371825|sp|Q89I89|SYA_BRAJA RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
          Length = 892

 Score = 44.7 bits (104), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 32/133 (24%), Positives = 61/133 (45%), Gaps = 7/133 (5%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKM 126
           RS     HS  H++ EA++ +  +     G ++  D   +DF   +P +++ELA++E   
Sbjct: 558 RSSIRAHHSATHLIHEALRQVLGDHIAQRGSMVAPDRLRFDFVHPKPITAEELARVEDIA 617

Query: 127 QEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
            +++  +     + +  ++ARE     LF  +K   +V ++              G   +
Sbjct: 618 NDVVLENDEVTTRVMGVDEAREAGARALF-GEKYGDEVRVVSMGRTARERGANALGWSVE 676

Query: 182 LCRGPHVRSTGQV 194
           LC G HVR TG +
Sbjct: 677 LCGGTHVRRTGDI 689


>gi|238879629|gb|EEQ43267.1| conserved hypothetical protein [Candida albicans WO-1]
          Length = 575

 Score = 44.7 bits (104), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 42/173 (24%), Positives = 79/173 (45%), Gaps = 22/173 (12%)

Query: 255 LFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDS 313
           L +I    +G++ W + G  I   +   +R+++ +  +EE++   +  + LW+ +  WD 
Sbjct: 39  LGYITYPRAGLVNWSKMGLLIQNKISQIIRQRMDEIQFEEVSLSLISHKELWKLTNRWD- 97

Query: 314 YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE- 372
            +  +F  K   D    + T   +  N      V    L+SY+  P+ L +    +RNE 
Sbjct: 98  -QEEIF--KLVGDEYLLVPTAEEEITN-----YVKKQFLESYKNFPLALYQINPKFRNEK 149

Query: 373 -PSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS----IYKDFGF 420
            P G   GL+R + F   DA+ F   E   +E +K +  ++     I++D G 
Sbjct: 150 RPRG---GLLRGKEFLMKDAYSFDLNE---SEAMKTYEKVVGAYHKIFQDLGI 196


>gi|229188301|ref|ZP_04315352.1| Seryl-tRNA synthetase [Bacillus cereus ATCC 10876]
 gi|228595169|gb|EEK52937.1| Seryl-tRNA synthetase [Bacillus cereus ATCC 10876]
          Length = 424

 Score = 44.7 bits (104), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 35/153 (22%), Positives = 66/153 (43%), Gaps = 13/153 (8%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDD--YEEINTPQVLDQHLWQQSGHWDSYRANMF 319
           GS  +F+   G ++ + LIS+M     D+  YEE+  P ++++     +G    +  + F
Sbjct: 160 GSRFVFYKGAGARLERALISFMLDLHTDEHGYEEVLPPYMVNRASMTGTGQLPKFEEDAF 219

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS--- 376
            ++  D        + L P        +    + +  +LP+R A F S +R+E   +   
Sbjct: 220 RIESED--------YFLIPTAEVPVTNMHRDEILNKEQLPIRYAAFSSCFRSEAGSAGRD 271

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
             GL+R   F + +   F   E  + E  K+ N
Sbjct: 272 TRGLIRQHQFNKVELVKFVKPEDSYEELEKLTN 304


>gi|309776525|ref|ZP_07671506.1| phosphoribulokinase family protein [Erysipelotrichaceae bacterium
           3_1_53]
 gi|308915702|gb|EFP61461.1| phosphoribulokinase family protein [Erysipelotrichaceae bacterium
           3_1_53]
          Length = 541

 Score = 44.7 bits (104), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 29/116 (25%), Positives = 58/116 (50%), Gaps = 3/116 (2%)

Query: 19  VHATGSDVAESISRSLAKKAV--AVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIRH 75
           +H         + ++L  +AV  AV ++GK+ DL+  V R   ++ I  +      +   
Sbjct: 12  LHCEAGTYVHELLQTLPLQAVVYAVTLDGKLHDLNYRVKRNAVLDFIYADSETGKLIYER 71

Query: 76  SCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIA 131
           S   +   AV+S++P+  V +   +  G Y + DK+      ++ +IE++M+E+IA
Sbjct: 72  SLNFLFIVAVRSLFPDAHVRMEHALSGGQYCEIDKQDYCKPQDVRKIERRMKELIA 127


>gi|299131739|ref|ZP_07024934.1| alanyl-tRNA synthetase [Afipia sp. 1NLS2]
 gi|298591876|gb|EFI52076.1| alanyl-tRNA synthetase [Afipia sp. 1NLS2]
          Length = 888

 Score = 44.7 bits (104), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 57/126 (45%), Gaps = 11/126 (8%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++ EA++ +  +     G ++  +   +DF   +P + DEL++IE    +I+  +
Sbjct: 565 HSATHLLHEALRQVLGDHIAQRGSLVSPERLRFDFAHTKPITPDELSRIEDIANDIVLEN 624

Query: 134 SPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
                + +  E AR      LF  +K   +V ++       N      G   +LC G HV
Sbjct: 625 GEVTTRLMGIEDARSSGARALF-GEKYGDEVRVVSMGQGSGNAL----GWSVELCGGTHV 679

Query: 189 RSTGQV 194
           R TG +
Sbjct: 680 RRTGDI 685


>gi|189461379|ref|ZP_03010164.1| hypothetical protein BACCOP_02034 [Bacteroides coprocola DSM 17136]
 gi|189431908|gb|EDV00893.1| hypothetical protein BACCOP_02034 [Bacteroides coprocola DSM 17136]
          Length = 496

 Score = 44.7 bits (104), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 62/290 (21%), Positives = 118/290 (40%), Gaps = 54/290 (18%)

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           + + + + SYR+LP+   ++ +V R E    L   +R   F   + H   T      E  
Sbjct: 133 STYKNWINSYRDLPILCNQWANVMRWEMRTRL--FLRTAEFLWQEGH---TAHATREEAE 187

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
                ++ +Y DF  EK M                   A  ++KGV      S+ +R   
Sbjct: 188 AEAQKMLHVYGDFA-EKYM-------------------AVPVIKGV-----KSANERF-- 220

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIH 524
                 GA      E +++D  G+  QCGT   +  N    FN  +V+ +++  +   + 
Sbjct: 221 -----AGALDTYTIEGLMQD--GKALQCGTSHFLGQNFAKAFNVQFVDKNNKLDY---VW 270

Query: 525 RAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTITSSAVEYAQ------EIANL 574
              +G   R +G +I     +    LP  L+PIQ ++  I  +  +  Q       I   
Sbjct: 271 ATSWGVSTRLMGALIMTHSDDNGLVLPPHLAPIQVVIVPIYKNDEQLKQIDAKVEGIVTK 330

Query: 575 LKSHHLSIETD-FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRR 623
           L+   +S++ D   N+   +K  ++ +K +P+ ++ G ++    ++ I R
Sbjct: 331 LREMGISVKYDNADNKRPGFKFADYELKGVPVRLVMGGRDLENNTMEIMR 380


>gi|196041939|ref|ZP_03109226.1| serine--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|196027194|gb|EDX65814.1| serine--tRNA ligase [Bacillus cereus NVH0597-99]
          Length = 424

 Score = 44.7 bits (104), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 35/153 (22%), Positives = 66/153 (43%), Gaps = 13/153 (8%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDD--YEEINTPQVLDQHLWQQSGHWDSYRANMF 319
           GS  +F+   G ++ + LIS+M     D+  YEE+  P ++++     +G    +  + F
Sbjct: 160 GSRFVFYKGAGARLERALISFMLDLHTDEHGYEEVLPPYMVNRASMTGTGQLPKFEEDAF 219

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS--- 376
            ++  D        + L P        +    + +  +LP+R A F S +R+E   +   
Sbjct: 220 RIESED--------YFLIPTAEVPVTNMHRDEILNKEQLPIRYAAFSSCFRSEAGSAGRD 271

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
             GL+R   F + +   F   E  + E  K+ N
Sbjct: 272 TRGLIRQHQFNKVELVKFVKPEDSYEELEKLTN 304


>gi|115610688|ref|XP_797369.2| PREDICTED: similar to Alanyl-tRNA synthetase (Alanine--tRNA ligase)
           (AlaRS) [Strongylocentrotus purpuratus]
 gi|115964130|ref|XP_001180526.1| PREDICTED: similar to Alanyl-tRNA synthetase (Alanine--tRNA ligase)
           (AlaRS) [Strongylocentrotus purpuratus]
          Length = 1041

 Score = 44.7 bits (104), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 32/148 (21%), Positives = 66/148 (44%), Gaps = 9/148 (6%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           + +   E+ R   +  H+  HI+  A++ +   ++     +  D F +DF+ E+  S  +
Sbjct: 661 VTLYVNEERREKLMRNHTGTHILNFALRQVLGHIEQKGSSVAPDRFRFDFNAEKSISDRQ 720

Query: 119 LAQIEKKMQEIIARDSPF------LKQYLSHEKARELF-ESKKEAYKVEILESIPAKENV 171
           L QI      +I+   P       L++ L+ E  R +  E+  +   V  +     + N 
Sbjct: 721 LQQISSIANNLISNSLPVHQESIPLQKALTIEGLRTMTGETYPDPVTVVCIGHQDGQLNG 780

Query: 172 TLYRQG--EWFDLCRGPHVRSTGQVKKF 197
            + + G     +LC G HV++TG +++ 
Sbjct: 781 DMTKLGMETSLELCGGTHVKNTGHIRRL 808


>gi|21672515|ref|NP_660582.1| prolyl-tRNA synthetase [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
 gi|25009415|sp|Q8K9S2|SYP_BUCAP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|21623136|gb|AAM67793.1| prolyl-tRNA synthetase [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
          Length = 571

 Score = 44.7 bits (104), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 32/138 (23%), Positives = 61/138 (44%), Gaps = 7/138 (5%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  SG+  W   G ++   +   ++ ++ K +  E+  P V  + LW+ SG    Y  
Sbjct: 32  IRKLSSGIYIWLPTGIRVLNKIKDIIKNEMRKINALEVLMPVVQPKKLWENSGRLSIYGE 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            +F      +     + F L P N         + + S++ELP+ + +  + +R+E    
Sbjct: 92  ELFQFYDRRN-----QKFILGPTNEEVVTNFIRNEINSFKELPLIIYQIQTKFRDEIRPR 146

Query: 377 LHGLMRVRGFTQDDAHVF 394
             G++R R F   DA+ F
Sbjct: 147 F-GIVRSREFIMKDAYSF 163


>gi|299739951|ref|XP_001840374.2| proline-tRNA ligase [Coprinopsis cinerea okayama7#130]
 gi|298404017|gb|EAU81430.2| proline-tRNA ligase [Coprinopsis cinerea okayama7#130]
          Length = 718

 Score = 44.3 bits (103), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 5/104 (4%)

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
           + L P N P   A +   ++S+R+LP++L ++ SV R E   +    +R R F   + H 
Sbjct: 320 YPLSPSNPPPDYAKW---IRSHRDLPLKLNQWNSVVRWE-FKNPQPFLRTREFLWQEGHT 375

Query: 394 -FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
            F TKE+   E  +I +L   +Y+D     ++  + +  EK  G
Sbjct: 376 AFLTKEEADTEVRQILDLYRQVYEDLLAVPVIPGIKSEKEKFAG 419


>gi|296452977|sp|Q9NYK5|RM39_HUMAN RecName: Full=39S ribosomal protein L39, mitochondrial;
           Short=L39mt; Short=MRP-L39; AltName: Full=39S ribosomal
           protein L5, mitochondrial; Short=L5mt; Short=MRP-L5
          Length = 338

 Score = 44.3 bits (103), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 86/192 (44%), Gaps = 24/192 (12%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIR---HS 76
           +T    A  +S    +K++   ++G+  D+  P+ +   I+ +T +D     V +    S
Sbjct: 86  STPYSCAMHLSEWYCRKSILALVDGQPWDMYKPLTKSCEIKFLTFKDCDPGEVNKAYWRS 145

Query: 77  CAHIMAEAVQSIWPE------VQVAIGPIIEDGFYYD------FDKEQPFSSDELAQIEK 124
           CA +M   ++  + +      V+    P+I   F YD       D+  P + + L    K
Sbjct: 146 CAMMMGCVIERAFKDEYMVNLVRAPEVPVISGAFCYDVVLDSKLDEWMP-TKENLRSFTK 204

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN----VTLYRQGEWF 180
               +I +D PF    +  + A E+F+  K  YKV+ +E   A +N    V L+R G++ 
Sbjct: 205 DAHALIYKDLPFETLEVEAKVALEIFQHSK--YKVDFIEE-KASQNPERIVKLHRIGDFI 261

Query: 181 DLCRGPHVRSTG 192
           D+  GP +  T 
Sbjct: 262 DVSEGPLIPRTS 273


>gi|27886582|ref|NP_059142.2| 39S ribosomal protein L39, mitochondrial isoform a [Homo sapiens]
 gi|78394909|gb|AAI07720.1| Mitochondrial ribosomal protein L39 [Homo sapiens]
 gi|119630384|gb|EAX09979.1| mitochondrial ribosomal protein L39, isoform CRA_a [Homo sapiens]
          Length = 338

 Score = 44.3 bits (103), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 86/192 (44%), Gaps = 24/192 (12%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIR---HS 76
           +T    A  +S    +K++   ++G+  D+  P+ +   I+ +T +D     V +    S
Sbjct: 86  STPYSCAMHLSEWYCRKSILALVDGQPWDMYKPLTKSCEIKFLTFKDCDPGEVNKAYWRS 145

Query: 77  CAHIMAEAVQSIWPE------VQVAIGPIIEDGFYYD------FDKEQPFSSDELAQIEK 124
           CA +M   ++  + +      V+    P+I   F YD       D+  P + + L    K
Sbjct: 146 CAMMMGCVIERAFKDEYMVNLVRAPEVPVISGAFCYDVVLDSKLDEWMP-TKENLRSFTK 204

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN----VTLYRQGEWF 180
               +I +D PF    +  + A E+F+  K  YKV+ +E   A +N    V L+R G++ 
Sbjct: 205 DAHALIYKDLPFETLEVEAKVALEIFQHSK--YKVDFIEE-KASQNPERIVKLHRIGDFI 261

Query: 181 DLCRGPHVRSTG 192
           D+  GP +  T 
Sbjct: 262 DVSEGPLIPRTS 273


>gi|260585028|ref|ZP_05852770.1| proline--tRNA ligase [Granulicatella elegans ATCC 700633]
 gi|260157224|gb|EEW92298.1| proline--tRNA ligase [Granulicatella elegans ATCC 700633]
          Length = 482

 Score = 44.3 bits (103), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 59/296 (19%), Positives = 111/296 (37%), Gaps = 52/296 (17%)

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
            AL+P +       F++ + SYR+LP  + ++ +V+R E        +R   F   + H 
Sbjct: 104 LALRPTSETMIGTAFSNWINSYRDLPYEVNQWANVFRWE--KKTLPFLRTSEFLWQEGHT 161

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
               E    +  +    ++ IYK+                             +++GVL 
Sbjct: 162 AHADEA---DARRRTMKMLDIYKE-----------------------------VVEGVLA 189

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVN 512
                 Q    T      GA      E ++KD  G+  Q GT   +       F+  Y+ 
Sbjct: 190 VPVYEGQ---KTPSERFAGAVDTYSIEAMMKD--GKAVQAGTSHYMGTKFAEAFDIKYLT 244

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTI-----TSS 563
             +E  H    H   +G   R IG +I          LP  ++P Q ++  +       +
Sbjct: 245 KENEHVH---AHTTSWGVSTRLIGSLIMTHGDEQGLVLPPKVAPTQVVLIPVGPWKKNPA 301

Query: 564 AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSI 619
            +E  +E+   LK+  L ++ D  + +  +K  E  ++ +P+ I CG ++     +
Sbjct: 302 ILEKLEELQQQLKAAGLRVKIDDTDNSPGFKFNEWELRGVPMRIECGPRDLENNQV 357


>gi|150396732|ref|YP_001327199.1| alanyl-tRNA synthetase [Sinorhizobium medicae WSM419]
 gi|205830211|sp|A6U9N4|SYA_SINMW RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|150028247|gb|ABR60364.1| alanyl-tRNA synthetase [Sinorhizobium medicae WSM419]
          Length = 887

 Score = 44.3 bits (103), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 32/128 (25%), Positives = 59/128 (46%), Gaps = 12/128 (9%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++ EA++ +        G ++  +   +D    +P +S+EL  +E+   EII ++
Sbjct: 564 HSATHLLHEALREVLGTHVSQKGSLVAPERLRFDVSHPKPMTSEELKVVEEMANEIIVQN 623

Query: 134 SPFLKQYLS-----HEKARELFESK--KEAYKVEILESIPAKENVTLYRQGEWFDLCRGP 186
           +P + + +S      E A  LF  K   E   V + + +   +    Y      +LC G 
Sbjct: 624 TPVVTRLMSVDDAIAEGAMALFGEKYGDEVRVVSMGQGLHGSKAGKAYS----VELCGGT 679

Query: 187 HVRSTGQV 194
           HV +TG +
Sbjct: 680 HVSATGDI 687


>gi|229170865|ref|ZP_04298470.1| Seryl-tRNA synthetase [Bacillus cereus MM3]
 gi|228612600|gb|EEK69817.1| Seryl-tRNA synthetase [Bacillus cereus MM3]
          Length = 424

 Score = 44.3 bits (103), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 35/153 (22%), Positives = 66/153 (43%), Gaps = 13/153 (8%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDD--YEEINTPQVLDQHLWQQSGHWDSYRANMF 319
           GS  +F+   G ++ + LIS+M     D+  YEE+  P ++++     +G    +  + F
Sbjct: 160 GSRFVFYKGAGARLERALISFMLDLHTDEHGYEEVLPPYMVNRASMTGTGQLPKFEEDAF 219

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS--- 376
            ++  D        + L P        +    + +  +LP+R A F S +R+E   +   
Sbjct: 220 RIESED--------YFLIPTAEVPVTNMHRDEILNKEQLPIRYAAFSSCFRSEAGSAGRD 271

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
             GL+R   F + +   F   E  + E  K+ N
Sbjct: 272 TRGLIRQHQFNKVELVKFVKPEDSYEELEKLTN 304


>gi|220912189|ref|YP_002487498.1| prolyl-tRNA synthetase [Arthrobacter chlorophenolicus A6]
 gi|219859067|gb|ACL39409.1| prolyl-tRNA synthetase [Arthrobacter chlorophenolicus A6]
          Length = 599

 Score = 44.3 bits (103), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 39/191 (20%), Positives = 81/191 (42%), Gaps = 17/191 (8%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R     +I     G+  W   G  + + +   +R ++     +E++ P 
Sbjct: 15  DAEVASHKLLVRAG---YIRRAAPGIYTWLPLGLSVLRKVEQVIREEMAAIGAQEVHFPA 71

Query: 299 VLDQHLWQQSGHWDSYRANMFAV---KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           +L +  ++ +  W  Y   +F +   K AD        + L P +      +      SY
Sbjct: 72  LLPREPYEATNRWTEYGEGLFRLQDRKGAD--------YLLAPTHEEMFTLLVKDLYSSY 123

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH-NLIISI 414
           ++LP+ L +  + YR+E +    GL+R R F   D++ F   +   +     H +  + I
Sbjct: 124 KDLPLSLYQIQNKYRDE-ARPRAGLLRGREFIMKDSYSFDVDDAGLDASYAAHRSAYLKI 182

Query: 415 YKDFGFEKIMV 425
           ++  G + + V
Sbjct: 183 FERLGLDVVPV 193


>gi|30260206|ref|NP_842583.1| seryl-tRNA synthetase [Bacillus anthracis str. Ames]
 gi|47525268|ref|YP_016617.1| seryl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49183051|ref|YP_026303.1| seryl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|49478185|ref|YP_034372.1| seryl-tRNA synthetase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|65317479|ref|ZP_00390438.1| COG0172: Seryl-tRNA synthetase [Bacillus anthracis str. A2012]
 gi|118475790|ref|YP_892941.1| seryl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|165873234|ref|ZP_02217845.1| seryl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167635026|ref|ZP_02393343.1| seryl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|167641731|ref|ZP_02399974.1| seryl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|170688939|ref|ZP_02880141.1| seryl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|170707501|ref|ZP_02897954.1| seryl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|177655686|ref|ZP_02937011.1| seryl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190569337|ref|ZP_03022229.1| seryl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|196036387|ref|ZP_03103784.1| seryl-tRNA synthetase [Bacillus cereus W]
 gi|196047691|ref|ZP_03114895.1| seryl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|218901218|ref|YP_002449052.1| seryl-tRNA synthetase [Bacillus cereus AH820]
 gi|225862069|ref|YP_002747447.1| seryl-tRNA synthetase [Bacillus cereus 03BB102]
 gi|227812690|ref|YP_002812699.1| seryl-tRNA synthetase [Bacillus anthracis str. CDC 684]
 gi|228912755|ref|ZP_04076404.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|228925270|ref|ZP_04088368.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228931519|ref|ZP_04094427.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228943823|ref|ZP_04106210.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|229089148|ref|ZP_04220432.1| Seryl-tRNA synthetase [Bacillus cereus Rock3-42]
 gi|229119679|ref|ZP_04248942.1| Seryl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|229159191|ref|ZP_04287217.1| Seryl-tRNA synthetase [Bacillus cereus R309803]
 gi|229182411|ref|ZP_04309664.1| Seryl-tRNA synthetase [Bacillus cereus BGSC 6E1]
 gi|229194407|ref|ZP_04321212.1| Seryl-tRNA synthetase [Bacillus cereus m1293]
 gi|229600591|ref|YP_002864668.1| serine--tRNA ligase [Bacillus anthracis str. A0248]
 gi|254686605|ref|ZP_05150464.1| seryl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066]
 gi|254724158|ref|ZP_05185943.1| seryl-tRNA synthetase [Bacillus anthracis str. A1055]
 gi|254737007|ref|ZP_05194712.1| seryl-tRNA synthetase [Bacillus anthracis str. Western North
           America USA6153]
 gi|254744205|ref|ZP_05201886.1| seryl-tRNA synthetase [Bacillus anthracis str. Kruger B]
 gi|254751196|ref|ZP_05203235.1| seryl-tRNA synthetase [Bacillus anthracis str. Vollum]
 gi|301051753|ref|YP_003789964.1| seryl-tRNA synthetase [Bacillus anthracis CI]
 gi|46577221|sp|Q81W25|SYS_BACAN RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|67461763|sp|Q6HPZ8|SYS_BACHK RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|166200600|sp|A0R891|SYS_BACAH RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|226701386|sp|B7JJC8|SYS_BACC0 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|254783003|sp|C3P9G2|SYS_BACAA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|254783004|sp|C3LIY9|SYS_BACAC RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|254783005|sp|C1ES19|SYS_BACC3 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|30253527|gb|AAP24069.1| serine--tRNA ligase [Bacillus anthracis str. Ames]
 gi|47500416|gb|AAT29092.1| seryl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49176978|gb|AAT52354.1| seryl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|49329741|gb|AAT60387.1| serine--tRNA ligase (seryl-tRNA synthetase) [Bacillus thuringiensis
           serovar konkukian str. 97-27]
 gi|118415015|gb|ABK83434.1| seryl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|164711032|gb|EDR16598.1| seryl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167510285|gb|EDR85688.1| seryl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|167529500|gb|EDR92250.1| seryl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|170127497|gb|EDS96371.1| seryl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|170667163|gb|EDT17924.1| seryl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|172080026|gb|EDT65126.1| seryl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190559559|gb|EDV13552.1| seryl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|195991017|gb|EDX54988.1| seryl-tRNA synthetase [Bacillus cereus W]
 gi|196021476|gb|EDX60179.1| seryl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|218539339|gb|ACK91737.1| seryl-tRNA synthetase [Bacillus cereus AH820]
 gi|225785776|gb|ACO25993.1| serine--tRNA ligase [Bacillus cereus 03BB102]
 gi|227004875|gb|ACP14618.1| serine--tRNA ligase [Bacillus anthracis str. CDC 684]
 gi|228589063|gb|EEK47076.1| Seryl-tRNA synthetase [Bacillus cereus m1293]
 gi|228601057|gb|EEK58624.1| Seryl-tRNA synthetase [Bacillus cereus BGSC 6E1]
 gi|228624272|gb|EEK81072.1| Seryl-tRNA synthetase [Bacillus cereus R309803]
 gi|228663770|gb|EEL19347.1| Seryl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|228694189|gb|EEL47868.1| Seryl-tRNA synthetase [Bacillus cereus Rock3-42]
 gi|228815847|gb|EEM62081.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228828137|gb|EEM73863.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228834384|gb|EEM79923.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228846882|gb|EEM91885.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|229264999|gb|ACQ46636.1| serine--tRNA ligase [Bacillus anthracis str. A0248]
 gi|300373922|gb|ADK02826.1| seryl-tRNA synthetase [Bacillus cereus biovar anthracis str. CI]
 gi|324324006|gb|ADY19266.1| seryl-tRNA synthetase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 424

 Score = 44.3 bits (103), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 35/153 (22%), Positives = 66/153 (43%), Gaps = 13/153 (8%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDD--YEEINTPQVLDQHLWQQSGHWDSYRANMF 319
           GS  +F+   G ++ + LIS+M     D+  YEE+  P ++++     +G    +  + F
Sbjct: 160 GSRFVFYKGAGARLERALISFMLDLHTDEHGYEEVLPPYMVNRASMTGTGQLPKFEEDAF 219

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS--- 376
            ++  D        + L P        +    + +  +LP+R A F S +R+E   +   
Sbjct: 220 RIESED--------YFLIPTAEVPVTNMHRDEILNKEQLPIRYAAFSSCFRSEAGSAGRD 271

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
             GL+R   F + +   F   E  + E  K+ N
Sbjct: 272 TRGLIRQHQFNKVELVKFVKPEDSYEELEKLTN 304


>gi|198452048|ref|XP_001358602.2| GA18540 [Drosophila pseudoobscura pseudoobscura]
 gi|198131765|gb|EAL27743.2| GA18540 [Drosophila pseudoobscura pseudoobscura]
          Length = 418

 Score = 44.3 bits (103), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 51/231 (22%), Positives = 98/231 (42%), Gaps = 21/231 (9%)

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLFHIAEDG--SGVIFWHRKG--WKIFQTLISYMR 284
           +EL Q+++     + ++  +LAR ++L+ +   G  +G   ++  G    + Q +I Y  
Sbjct: 103 RELAQHVHREMPPKPKEFSELARALNLYRMDHLGNYTGHKSYYLTGHLATLEQAIIQYAL 162

Query: 285 RKI-KDDYEEINTPQVLDQHLWQQSG-HWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
           + + K  +  I+ P +L + + +  G   +  R  ++ +   +  +      AL      
Sbjct: 163 QSVTKHGFRLISVPDILPKEVIESCGMRTEGERTQVYKLDTGE-CLSGTSEMAL------ 215

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG--SLHGLMRVRGFTQDDAHVFCTKEQM 400
                F + +    ELP+++      YR E SG     G+ RV  FT+ +    CT  Q 
Sbjct: 216 --AGFFANKVLPEEELPLKVTAVSRCYRAETSGLQEEKGIYRVHQFTKVEMFAICTPTQS 273

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWD-DAENIMKG 450
             E  +  N+ + ++K  G   I  +L   P   +G+ A    D E  M G
Sbjct: 274 EAELEEFKNIEVDLFKQLG---INFRLLDMPPCELGAPAYQKYDIEAWMPG 321


>gi|206972683|ref|ZP_03233623.1| seryl-tRNA synthetase [Bacillus cereus AH1134]
 gi|228950564|ref|ZP_04112700.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki str.
           T03a001]
 gi|229067780|ref|ZP_04201099.1| Seryl-tRNA synthetase [Bacillus cereus F65185]
 gi|229077289|ref|ZP_04209972.1| Seryl-tRNA synthetase [Bacillus cereus Rock4-2]
 gi|229176616|ref|ZP_04304022.1| Seryl-tRNA synthetase [Bacillus cereus 172560W]
 gi|206732403|gb|EDZ49585.1| seryl-tRNA synthetase [Bacillus cereus AH1134]
 gi|228606846|gb|EEK64261.1| Seryl-tRNA synthetase [Bacillus cereus 172560W]
 gi|228706012|gb|EEL58317.1| Seryl-tRNA synthetase [Bacillus cereus Rock4-2]
 gi|228715333|gb|EEL67190.1| Seryl-tRNA synthetase [Bacillus cereus F65185]
 gi|228809107|gb|EEM55590.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki str.
           T03a001]
          Length = 424

 Score = 44.3 bits (103), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 35/153 (22%), Positives = 66/153 (43%), Gaps = 13/153 (8%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDD--YEEINTPQVLDQHLWQQSGHWDSYRANMF 319
           GS  +F+   G ++ + LIS+M     D+  YEE+  P ++++     +G    +  + F
Sbjct: 160 GSRFVFYKGAGARLERALISFMLDLHTDEHGYEEVLPPYMVNRASMTGTGQLPKFEEDAF 219

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS--- 376
            ++  D        + L P        +    + +  +LP+R A F S +R+E   +   
Sbjct: 220 RIESED--------YFLIPTAEVPVTNMHRDEILNKEQLPIRYAAFSSCFRSEAGSAGRD 271

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
             GL+R   F + +   F   E  + E  K+ N
Sbjct: 272 TRGLIRQHQFNKVELVKFVKPEDSYEELEKLTN 304


>gi|149235762|ref|XP_001523759.1| hypothetical protein LELG_05175 [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146452738|gb|EDK46994.1| hypothetical protein LELG_05175 [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 688

 Score = 44.3 bits (103), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 78/383 (20%), Positives = 144/383 (37%), Gaps = 59/383 (15%)

Query: 261 DGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH-LWQQSGHWDSYRANM 318
           D SG        + +++T+  Y   KIK    +    P  + Q  L ++  H + +   +
Sbjct: 213 DVSGCYILRPNSYAVWETIQDYFNTKIKALGVQNAYFPMFVSQKVLEKEKDHIEGFAPEV 272

Query: 319 FAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLH 378
             V  A  +  +    A++P +       +   ++S+R+LP++L ++ SV R E      
Sbjct: 273 AWVTRAGSSELE-EHIAIRPTSETVMYPYYAKWIRSHRDLPIKLNQWNSVVRWEFKHP-Q 330

Query: 379 GLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGS 437
             +R R F   + H     K++   E L+I +   +IY++     ++    T  EK  G 
Sbjct: 331 PFLRTREFLWQEGHTAHLYKKEAEEEVLQILDYYAAIYEELLAVPVVKGKKTENEKFAGG 390

Query: 438 DALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI- 496
           D                                    Y    E  +  A GR  Q GT  
Sbjct: 391 D------------------------------------YTTTVEGFIP-ATGRGIQGGTSH 413

Query: 497 QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP---- 552
            +  N    FN    +    +   +  ++  +G   R IG+M+     N  L L P    
Sbjct: 414 HLGQNFSKMFNMSVESPEGPEKGRLFAYQNSWGLSTRVIGVMVMTHSDNKGLVLPPRVAQ 473

Query: 553 IQAIVTTITSSAVEYAQE----------IANLLKSHHLSIETDFRNE-TINYKIREHSIK 601
            Q +V  +  +A   A++          I + LK   + +  D+R+     +K  +  +K
Sbjct: 474 TQVVVIPVGITAKTSAEQREQINKGAADIESRLKKAGIRVTGDYRDSYNPGWKFADWELK 533

Query: 602 KIPIIIICGDKE-ASERSIGIRR 623
            +P+ +  G K+  SE+   +RR
Sbjct: 534 GVPLRVEFGPKDLESEQVTAVRR 556


>gi|19074055|ref|NP_584661.1| PROLYL tRNA SYNTHETASE [Encephalitozoon cuniculi GB-M1]
 gi|74621295|sp|Q8SSD7|SYP_ENCCU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|19068697|emb|CAD25165.1| PROLYL tRNA SYNTHETASE [Encephalitozoon cuniculi GB-M1]
          Length = 520

 Score = 44.3 bits (103), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 71/322 (22%), Positives = 124/322 (38%), Gaps = 57/322 (17%)

Query: 319 FAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLH 378
           +  KC +  ++D    A++P +       F+  ++S+R+LP++L ++ SV R E  G+L 
Sbjct: 114 WITKCGNQVLED--PVAVRPTSETIIYPSFSKWIRSHRDLPLKLNQWCSVLRWELHGTLP 171

Query: 379 GLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGS 437
             +R + F   + H  F T+++   E L I +L   IY +     ++    +  EK  G+
Sbjct: 172 -FIRGKEFLWQEGHTAFLTRKESDEEVLAILDLYSQIYSELLAVPVIKGRKSENEKFGGA 230

Query: 438 DALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ 497
           D      E  + G               GV        G  F  +             I+
Sbjct: 231 DYT-TSIEAFIPGS------------GRGVQAATSHSLGQNFSRMFD-----------IK 266

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIV 557
            D +  S  ++F             +++  +G   R IGI       NL L L P  A+ 
Sbjct: 267 ADTDEGSESSSF-------------VYQNSWGITTRSIGIAAMIHSDNLGLVLPPRVAMT 313

Query: 558 TTI--------------TSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIREHSIKK 602
             +              T S   Y   +   LK+  + +  D R N T  +K     I+ 
Sbjct: 314 QVVIVPCGITTASSKDDTESLRAYINGVCVQLKNSGVRVHLDDRSNVTAGFKFNHWEIRG 373

Query: 603 IPIIIICGDKE-ASERSIGIRR 623
           +P+ +  G K+ AS  +  +RR
Sbjct: 374 VPLRLEIGFKDMASSEACLVRR 395


>gi|297568238|ref|YP_003689582.1| prolyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
 gi|296924153|gb|ADH84963.1| prolyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
          Length = 576

 Score = 44.3 bits (103), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 6/103 (5%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           +E+  P V    LW++SG W+ Y   +   K      +  R   L P +      +    
Sbjct: 67  QELLLPMVQPADLWRESGRWEKYGPELLRFKD-----RHQRESCLGPTHEEVITDLVRMN 121

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           + SYR+LPV L +  + +R+E      GLMR R F   D + F
Sbjct: 122 IHSYRQLPVNLYQVQTKFRDEIRPRF-GLMRGREFIMKDGYSF 163


>gi|218895153|ref|YP_002443564.1| seryl-tRNA synthetase [Bacillus cereus G9842]
 gi|228937319|ref|ZP_04099967.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar berliner ATCC
           10792]
 gi|228963114|ref|ZP_04124285.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228970205|ref|ZP_04130866.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar thuringiensis
           str. T01001]
 gi|228976775|ref|ZP_04137189.1| Seryl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|226701387|sp|B7IS31|SYS_BACC2 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|218545743|gb|ACK98137.1| seryl-tRNA synthetase [Bacillus cereus G9842]
 gi|228782937|gb|EEM31101.1| Seryl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228789506|gb|EEM37424.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar thuringiensis
           str. T01001]
 gi|228796570|gb|EEM44007.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228822344|gb|EEM68324.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar berliner ATCC
           10792]
 gi|326937809|gb|AEA13705.1| seryl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 424

 Score = 44.3 bits (103), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 35/153 (22%), Positives = 66/153 (43%), Gaps = 13/153 (8%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDD--YEEINTPQVLDQHLWQQSGHWDSYRANMF 319
           GS  +F+   G ++ + LIS+M     D+  YEE+  P ++++     +G    +  + F
Sbjct: 160 GSRFVFYKGAGARLERALISFMLDLHTDEHGYEEVLPPYMVNRASMTGTGQLPKFEEDAF 219

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS--- 376
            ++  D        + L P        +    + +  +LP+R A F S +R+E   +   
Sbjct: 220 RIESED--------YFLIPTAEVPVTNMHRDEILNKEQLPIRYAAFSSCFRSEAGSAGRD 271

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
             GL+R   F + +   F   E  + E  K+ N
Sbjct: 272 TRGLIRQHQFNKVELVKFVKPEDSYEELEKLTN 304


>gi|254761666|ref|ZP_05213684.1| seryl-tRNA synthetase [Bacillus anthracis str. Australia 94]
          Length = 424

 Score = 44.3 bits (103), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 35/153 (22%), Positives = 66/153 (43%), Gaps = 13/153 (8%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDD--YEEINTPQVLDQHLWQQSGHWDSYRANMF 319
           GS  +F+   G ++ + LIS+M     D+  YEE+  P ++++     +G    +  + F
Sbjct: 160 GSRFVFYKGAGARLERALISFMLDLHTDEHGYEEVLPPYMVNRASMTGTGQLPKFEEDAF 219

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS--- 376
            ++  D        + L P        +    + +  +LP+R A F S +R+E   +   
Sbjct: 220 RIESED--------YFLIPTAEVPVTNMHRDEILNKEQLPIRYAAFSSCFRSEAGSAGRD 271

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
             GL+R   F + +   F   E  + E  K+ N
Sbjct: 272 TRGLIRQHQFNKVELVKFVKPEDSYEELEKLTN 304


>gi|164658475|ref|XP_001730363.1| hypothetical protein MGL_2745 [Malassezia globosa CBS 7966]
 gi|159104258|gb|EDP43149.1| hypothetical protein MGL_2745 [Malassezia globosa CBS 7966]
          Length = 509

 Score = 44.3 bits (103), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 35/143 (24%), Positives = 67/143 (46%), Gaps = 15/143 (10%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINT-----PQVLDQHLWQQSGHW 311
           +I +  SG   +   G ++ + L +     I+D+  +I+      PQ+L   LW ++G +
Sbjct: 55  YIRQSASGTYTYLPIGLRMLKKLTAI----IEDEMHQISASQLELPQLLSPALWHKTGRF 110

Query: 312 DSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRN 371
           ++  + +F +K  D    D+    L P +      +    + S + LPVR+ + G  +R+
Sbjct: 111 EAMGSELFRLK--DRRGNDM---ILAPTHEEEITKLVGMEIDSAKSLPVRVFQIGRKFRD 165

Query: 372 EPSGSLHGLMRVRGFTQDDAHVF 394
           EP     GL+R + F   D + F
Sbjct: 166 EPRPRA-GLLRTKEFLMKDMYSF 187


>gi|158290346|ref|XP_311956.4| AGAP002945-PA [Anopheles gambiae str. PEST]
 gi|157017849|gb|EAA07591.5| AGAP002945-PA [Anopheles gambiae str. PEST]
          Length = 302

 Score = 44.3 bits (103), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 2/105 (1%)

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV- 393
           A++P +       +   ++SYR+LP+RL ++ +V R E        +R R F   + H  
Sbjct: 81  AVRPTSETVMYPAYAKWIQSYRDLPIRLNQWNNVVRWEFKHP-QPFLRTREFLWQEGHTA 139

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD 438
           F +K++   E L I +L   +Y D     ++    T  EK  G D
Sbjct: 140 FASKQEADEEVLTILDLYAKVYTDLLAIPVVKGRKTEKEKFAGGD 184


>gi|302409932|ref|XP_003002800.1| threonyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
 gi|261358833|gb|EEY21261.1| threonyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
          Length = 104

 Score = 44.3 bits (103), Expect = 0.062,   Method: Composition-based stats.
 Identities = 18/51 (35%), Positives = 32/51 (62%), Gaps = 1/51 (1%)

Query: 272 GWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           G +IF  L+ ++RR+ +   +EE+ TP +  + LW+ SGH  +Y  +M+ V
Sbjct: 16  GARIFNRLVDFLRRQYVSYGFEEVITPNIYKKSLWEVSGHLQNYADDMYTV 66


>gi|228905813|ref|ZP_04069712.1| Seryl-tRNA synthetase [Bacillus thuringiensis IBL 200]
 gi|228853821|gb|EEM98579.1| Seryl-tRNA synthetase [Bacillus thuringiensis IBL 200]
          Length = 424

 Score = 44.3 bits (103), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 35/153 (22%), Positives = 66/153 (43%), Gaps = 13/153 (8%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDD--YEEINTPQVLDQHLWQQSGHWDSYRANMF 319
           GS  +F+   G ++ + LIS+M     D+  YEE+  P ++++     +G    +  + F
Sbjct: 160 GSRFVFYKGAGARLERALISFMLDLHTDEHGYEEVLPPYMVNRASMTGTGQLPKFEEDAF 219

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS--- 376
            ++  D        + L P        +    + +  +LP+R A F S +R+E   +   
Sbjct: 220 RIESED--------YFLIPTAEVPVTNMHRDEILNKEQLPIRYAAFSSCFRSEAGSAGRD 271

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
             GL+R   F + +   F   E  + E  K+ N
Sbjct: 272 TRGLIRQHQFNKVELVKFVKPEDSYEELEKLTN 304


>gi|229074077|ref|ZP_04207126.1| Seryl-tRNA synthetase [Bacillus cereus Rock4-18]
 gi|229094737|ref|ZP_04225745.1| Seryl-tRNA synthetase [Bacillus cereus Rock3-29]
 gi|229100803|ref|ZP_04231621.1| Seryl-tRNA synthetase [Bacillus cereus Rock3-28]
 gi|229113691|ref|ZP_04243128.1| Seryl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|228669757|gb|EEL25162.1| Seryl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|228682610|gb|EEL36669.1| Seryl-tRNA synthetase [Bacillus cereus Rock3-28]
 gi|228688675|gb|EEL42545.1| Seryl-tRNA synthetase [Bacillus cereus Rock3-29]
 gi|228709040|gb|EEL61164.1| Seryl-tRNA synthetase [Bacillus cereus Rock4-18]
          Length = 424

 Score = 44.3 bits (103), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 35/153 (22%), Positives = 66/153 (43%), Gaps = 13/153 (8%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDD--YEEINTPQVLDQHLWQQSGHWDSYRANMF 319
           GS  +F+   G ++ + LIS+M     D+  YEE+  P ++++     +G    +  + F
Sbjct: 160 GSRFVFYKGAGARLERALISFMLDLHTDEHGYEEVLPPYMVNRASMTGTGQLPKFEEDAF 219

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS--- 376
            ++  D        + L P        +    + +  +LP+R A F S +R+E   +   
Sbjct: 220 RIESED--------YFLIPTAEVPVTNMHRDEILNKEQLPIRYAAFSSCFRSEAGSAGRD 271

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
             GL+R   F + +   F   E  + E  K+ N
Sbjct: 272 TRGLIRQHQFNKVELVKFVKPEDSYEELEKLTN 304


>gi|30018290|ref|NP_829921.1| seryl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|218233674|ref|YP_002364867.1| seryl-tRNA synthetase [Bacillus cereus B4264]
 gi|228918967|ref|ZP_04082348.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar huazhongensis
           BGSC 4BD1]
 gi|228956457|ref|ZP_04118255.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|229039921|ref|ZP_04189687.1| Seryl-tRNA synthetase [Bacillus cereus AH676]
 gi|229107702|ref|ZP_04237340.1| Seryl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|229125533|ref|ZP_04254567.1| Seryl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|229142822|ref|ZP_04271266.1| Seryl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|229148425|ref|ZP_04276683.1| Seryl-tRNA synthetase [Bacillus cereus m1550]
 gi|296500850|ref|YP_003662550.1| seryl-tRNA synthetase [Bacillus thuringiensis BMB171]
 gi|46577219|sp|Q81JC4|SYS_BACCR RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|226701388|sp|B7HII5|SYS_BACC4 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|29893830|gb|AAP07122.1| Seryl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|218161631|gb|ACK61623.1| serine--tRNA ligase [Bacillus cereus B4264]
 gi|228635034|gb|EEK91605.1| Seryl-tRNA synthetase [Bacillus cereus m1550]
 gi|228640636|gb|EEK97022.1| Seryl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|228657917|gb|EEL13721.1| Seryl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|228675742|gb|EEL30948.1| Seryl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|228727411|gb|EEL78602.1| Seryl-tRNA synthetase [Bacillus cereus AH676]
 gi|228803214|gb|EEM50034.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228840682|gb|EEM85942.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar huazhongensis
           BGSC 4BD1]
 gi|296321902|gb|ADH04830.1| seryl-tRNA synthetase [Bacillus thuringiensis BMB171]
          Length = 424

 Score = 44.3 bits (103), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 35/153 (22%), Positives = 66/153 (43%), Gaps = 13/153 (8%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDD--YEEINTPQVLDQHLWQQSGHWDSYRANMF 319
           GS  +F+   G ++ + LIS+M     D+  YEE+  P ++++     +G    +  + F
Sbjct: 160 GSRFVFYKGAGARLERALISFMLDLHTDEHGYEEVLPPYMVNRASMTGTGQLPKFEEDAF 219

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS--- 376
            ++  D        + L P        +    + +  +LP+R A F S +R+E   +   
Sbjct: 220 RIESED--------YFLIPTAEVPVTNMHRDEILNKEQLPIRYAAFSSCFRSEAGSAGRD 271

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
             GL+R   F + +   F   E  + E  K+ N
Sbjct: 272 TRGLIRQHQFNKVELVKFVKPEDSYEELEKLTN 304


>gi|237842879|ref|XP_002370737.1| prolyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
 gi|211968401|gb|EEB03597.1| prolyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
 gi|221485712|gb|EEE23993.1| prolyl-tRNA synthetase, putative [Toxoplasma gondii GT1]
 gi|221502920|gb|EEE28630.1| prolyl-tRNA synthetase, putative [Toxoplasma gondii VEG]
          Length = 711

 Score = 44.3 bits (103), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 60/323 (18%), Positives = 123/323 (38%), Gaps = 58/323 (17%)

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYR---NEPSGSLHGLMRVRGFTQDD 390
            A++P +       +   ++S+R+LP++L ++ SV R    +P+      +R R F   +
Sbjct: 315 IAIRPTSETIMYPAYAKWIRSHRDLPLKLNQWCSVVRWEFKQPTP----FLRTREFLWQE 370

Query: 391 AHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMK 449
            H    T+E+ +   L I    + +Y+ + +E+ +     + EK  G        E    
Sbjct: 371 GHTAHATEEEAWELVLDI----LELYRRW-YEECLAVPVIKGEKSEG--------EKFAG 417

Query: 450 GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAF 509
           G   T   +       G+        G  F  +                          F
Sbjct: 418 GKKTTTVEAFIPENGRGIQAATSHLLGTNFAKM--------------------------F 451

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTTI----- 560
            +    E+ H  ++H+  +G   R +G+MI     +  L + P    +Q ++  I     
Sbjct: 452 EIEFEDEEGHKRLVHQTSWGCTTRSLGVMIMTHGDDKGLVIPPRVASVQVVIIPILFKDE 511

Query: 561 -TSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERS 618
            T   +   +E+  +L+   + +  D R N T  +K     +K +P+ +  G K+ ++ +
Sbjct: 512 NTGEILGKCRELKTMLEKADIRVRIDDRSNYTPGWKYNHWEVKGVPLRLELGPKDLAKGT 571

Query: 619 IGIRRFGSTTTQKVSLLDAIPIL 641
             + R  +    ++S  D  P L
Sbjct: 572 ARVVRRDTGEAYQISWADLAPKL 594


>gi|149641567|ref|XP_001511623.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus]
          Length = 1260

 Score = 44.3 bits (103), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 69/320 (21%), Positives = 122/320 (38%), Gaps = 58/320 (18%)

Query: 334  FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH- 392
             A++P +       +   ++S+R+LP+RL ++ +V R E        +R R F   + H 
Sbjct: 864  IAVRPTSETVMYPAYAKWVQSHRDLPIRLNQWCNVVRWE-FKHPQPFLRTREFLWQEGHS 922

Query: 393  VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
             F T E+   E L+I +L   +Y++     ++    T  EK  G D             +
Sbjct: 923  AFATYEEAAEEVLQILDLYAKVYEELLAIPVVKGRKTEKEKFAGGD---------YTTTV 973

Query: 453  DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
            +   ++S   I        G  +   FE I +D                 P      Y N
Sbjct: 974  EAFISASGRAIQGATSHHLGQNFSKMFEIIFEDP--------------KTPGEKQFAYQN 1019

Query: 513  SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTT--ITSSAVE 566
            S              +G   R IG+M      N+ L L P    +Q +V    IT+S  E
Sbjct: 1020 S--------------WGLTTRTIGVMTMVHGDNMGLVLPPRVASVQVVVIPCGITNSLSE 1065

Query: 567  --------YAQEIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKE-ASE 616
                       E    L S ++ +  D R N +  +K     +K +PI +  G ++  + 
Sbjct: 1066 EDREALIKKCNEYRKRLLSANVRVRVDLRDNYSPGWKFNHWELKGVPIRLEVGPRDMKNS 1125

Query: 617  RSIGIRRFGSTTTQKVSLLD 636
            + + +RR    T  K+++++
Sbjct: 1126 QFVAVRR---DTGDKITIVE 1142


>gi|167517909|ref|XP_001743295.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163778394|gb|EDQ92009.1| predicted protein [Monosiga brevicollis MX1]
          Length = 421

 Score = 44.3 bits (103), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 64/146 (43%), Gaps = 11/146 (7%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
           +IA+  SG+        ++   L + +R ++     +EI+   +  + LW  SG WD+  
Sbjct: 13  YIAQSSSGMYHMLPLAKRVLGKLENLVRAEMSAIGAQEISLSTLTGKDLWTHSGRWDTVS 72

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE--P 373
           + +F V+     +     + L P +      +    ++S R +P+ L +    YR+E  P
Sbjct: 73  SELFRVEDRRGAV-----YCLAPTHEEAITTLAKSYVRSARNMPLYLYQLDRKYRDELRP 127

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQ 399
                GL+R R F   D + F   EQ
Sbjct: 128 RS---GLLRGREFYMKDLYTFDVDEQ 150


>gi|260460847|ref|ZP_05809097.1| alanyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075]
 gi|259033424|gb|EEW34685.1| alanyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075]
          Length = 888

 Score = 44.3 bits (103), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 34/145 (23%), Positives = 63/145 (43%), Gaps = 12/145 (8%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSS 116
           ++E+      RS     HS  H++ EA++ +        G ++  +   +D    +P S 
Sbjct: 547 AVELKVDHARRSRLRANHSATHLIHEALREVLGTHVAQKGSLVAPERLRFDISHNKPISP 606

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLS-----HEKARELFESK--KEAYKVEILESIPAKE 169
           ++L ++E+   EI+ ++ P   + +S      E A  LF  K   E   V +   +   +
Sbjct: 607 EDLEEVERMANEIVVQNGPVTTRLISVDDAIAEGAMALFGEKYGDEVRVVSMGTGVHGAK 666

Query: 170 NVTLYRQGEWFDLCRGPHVRSTGQV 194
               Y      +LC G HVR+TG +
Sbjct: 667 ANRPYS----VELCGGTHVRATGDI 687


>gi|228898770|ref|ZP_04063054.1| Seryl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
 gi|228860862|gb|EEN05238.1| Seryl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
          Length = 424

 Score = 44.3 bits (103), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 35/153 (22%), Positives = 66/153 (43%), Gaps = 13/153 (8%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDD--YEEINTPQVLDQHLWQQSGHWDSYRANMF 319
           GS  +F+   G ++ + LIS+M     D+  YEE+  P ++++     +G    +  + F
Sbjct: 160 GSRFVFYKGAGARLERALISFMLDLHTDEHGYEEVLPPYMVNRASMTGTGQLPKFEEDAF 219

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS--- 376
            ++  D        + L P        +    + +  +LP+R A F S +R+E   +   
Sbjct: 220 RIESED--------YFLIPTAEVPVTNMHRDEILNKEQLPIRYAAFSSCFRSEAGSAGRD 271

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
             GL+R   F + +   F   E  + E  K+ N
Sbjct: 272 TRGLIRQHQFNKVELVKFVKPEDSYEELEKLTN 304


>gi|52145196|ref|YP_081631.1| seryl-tRNA synthetase [Bacillus cereus E33L]
 gi|67461705|sp|Q63HF6|SYS_BACCZ RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|51978665|gb|AAU20215.1| serine--tRNA ligase (seryl-tRNA synthetase) [Bacillus cereus E33L]
          Length = 424

 Score = 44.3 bits (103), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 35/153 (22%), Positives = 66/153 (43%), Gaps = 13/153 (8%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDD--YEEINTPQVLDQHLWQQSGHWDSYRANMF 319
           GS  +F+   G ++ + LIS+M     D+  YEE+  P ++++     +G    +  + F
Sbjct: 160 GSRFVFYKGAGARLERALISFMLDLHTDEHGYEEVLPPYMVNRASMTGTGQLPKFEEDAF 219

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS--- 376
            ++  D        + L P        +    + +  +LP+R A F S +R+E   +   
Sbjct: 220 RIESED--------YFLIPTAEVPVTNMHRDEILNKEQLPIRYAAFSSCFRSEAGSAGRD 271

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
             GL+R   F + +   F   E  + E  K+ N
Sbjct: 272 TRGLIRQHQFNKVELVKFVKPEDSYEELEKLTN 304


>gi|328954064|ref|YP_004371398.1| Prolyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
 gi|328454388|gb|AEB10217.1| Prolyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
          Length = 573

 Score = 44.3 bits (103), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 39/160 (24%), Positives = 68/160 (42%), Gaps = 10/160 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+E   H+ L R      I +  SG+  +   G  + + + + +R ++     +E+  P 
Sbjct: 17  EAETVSHQLLLRAG---MIRKLTSGIYDYLPLGLMVLRKVEAIVREEMNCAGAQELLLPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    LWQ+SG W  Y   +   +   D     R +   P +      +    + SYR+L
Sbjct: 74  VQPAELWQESGRWQIYGKELLRFQDRHD-----RDYCFGPTHEEVITDLVRREVHSYRQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE 398
           P+ L +  + +R+E      GL+R R F   D + F   E
Sbjct: 129 PLNLYQIQTKFRDEIRPRF-GLIRGREFIMKDGYSFDIDE 167



 Score = 38.9 bits (89), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 28/130 (21%), Positives = 60/130 (46%), Gaps = 13/130 (10%)

Query: 518 CHPVMIHRAVFGSIER---FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVE---YAQEI 571
           C+ + + R V  +IE+     GI+        P+ L+P Q ++  I ++ V+    A  +
Sbjct: 439 CYGIGVSRIVAAAIEQNHDLDGII-------FPMPLAPFQVLLVPIAANDVDTMAVASRL 491

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
              +++  + +  D RNE    K ++  +  IP+ ++ G K  ++ +  +R+  S   Q 
Sbjct: 492 YQEIRAAGIEVLFDDRNERPGIKFKDGDLLGIPVRVVLGPKTLAQGAAEVRQRRSRAVQL 551

Query: 632 VSLLDAIPIL 641
           + L   +  L
Sbjct: 552 IPLASLVAYL 561


>gi|281206251|gb|EFA80440.1| prolyl-tRNA synthetase [Polysphondylium pallidum PN500]
          Length = 880

 Score = 44.3 bits (103), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 61/128 (47%), Gaps = 17/128 (13%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           ++++ P++L + LW+++G W+S    +  VK   D   +    A      P H  +F   
Sbjct: 407 QKLSMPKLLSKELWEKTGRWESSGDELIKVK---DRKGEEYCLA------PTHEEIFTSM 457

Query: 352 LKSYR----ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
           L + R     LP++L + G  YR+E      GL+R R F   D + F   ++   +  + 
Sbjct: 458 LANERIATNNLPMKLYQIGDKYRDEIRPRF-GLLRGREFLMKDMYSF---DKSVADAEET 513

Query: 408 HNLIISIY 415
           +NL+ + Y
Sbjct: 514 YNLVKTAY 521


>gi|189501728|ref|YP_001957445.1| prolyl-tRNA synthetase [Candidatus Amoebophilus asiaticus 5a2]
 gi|259511573|sp|B3ER64|SYP_AMOA5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|189497169|gb|ACE05716.1| hypothetical protein Aasi_0277 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 491

 Score = 44.3 bits (103), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 71/313 (22%), Positives = 131/313 (41%), Gaps = 59/313 (18%)

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLK 406
           + + ++SYR+LP+ + ++ +V R E    L   +R   F   + H    T+ +   E L+
Sbjct: 132 YKNWIQSYRDLPLLINQWCNVVRWEMRTRL--FLRTAEFLWQEGHTAHATQAEAEQEALQ 189

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           + N    IY DFG + + +                      +KG+      +  +R    
Sbjct: 190 MLN----IYADFGKDYLAIPF--------------------LKGI-----KTEHERF--- 217

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF-NAFYVNSHSEKCHPVMIHR 525
                GA      E +++D  G+  Q GT      L  RF  AF V   ++      +  
Sbjct: 218 ----AGAEETYTIEALMQD--GKALQAGTSHF---LGQRFAKAFEVTFTNQAGQLDYVWG 268

Query: 526 AVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTITSSAVE------YAQEIANLL 575
             +G   R IG ++     +    LP  ++PIQ ++  I  +  E       AQ I   L
Sbjct: 269 TSWGLTTRLIGALVMTHSDDKGLVLPPRVAPIQIVIIPIYRTQEEKEAIQQQAQHIQQQL 328

Query: 576 KSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
            +H++S + D R+E    +K  E+ +K +PI +  G  + +  ++ + R    T++K ++
Sbjct: 329 IAHNISAKLDGRDEHKPGWKFAEYELKGVPIRMAIGPNDLANNTVELTR--RDTSEKTTV 386

Query: 635 -LDAIPILTKESL 646
             D I ++ K  L
Sbjct: 387 PTDNIIVVVKSML 399


>gi|154502472|ref|ZP_02039532.1| hypothetical protein RUMGNA_00285 [Ruminococcus gnavus ATCC 29149]
 gi|153796868|gb|EDN79288.1| hypothetical protein RUMGNA_00285 [Ruminococcus gnavus ATCC 29149]
          Length = 879

 Score = 44.3 bits (103), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 33/148 (22%), Positives = 71/148 (47%), Gaps = 11/148 (7%)

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           E+    + R+L+   HS  H++ +A++++    V+ A   + ED   +DF      +++E
Sbjct: 551 ELCVDAEKRALSARNHSATHLLQKALRTVLGTHVEQAGSSVNEDRLRFDFSHFSAMTAEE 610

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L ++E+ + E I    P   + +  E+AR+           + L      + V +   G+
Sbjct: 611 LQKVEEIVNEQIVAGLPVKVENMPIEEARKT--------GAQALFGEKYGDVVRVVNMGD 662

Query: 179 W-FDLCRGPHVRSTGQVKKFFKLMKVAG 205
           +  + C G HV++T ++   FK++  +G
Sbjct: 663 YSIEFCGGTHVKNTNEIMA-FKILSESG 689


>gi|189025892|ref|YP_001933664.1| uridine kinase [Treponema pallidum subsp. pallidum SS14]
 gi|189018467|gb|ACD71085.1| uridine kinase [Treponema pallidum subsp. pallidum SS14]
          Length = 555

 Score = 44.3 bits (103), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 25/101 (24%), Positives = 55/101 (54%), Gaps = 13/101 (12%)

Query: 52  DPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE 111
           +PVRE ++           A+ R +   + A A  S++P V++  G  ++ G+ Y   + 
Sbjct: 63  EPVREDTV--------LGAALYRRTARLLFATAFHSVYPHVRLFAGYRVQGGYCY---RT 111

Query: 112 QPFSSDEL--AQIEKKMQEIIARDSPFLKQYLSHEKARELF 150
           +   +D+L  + + ++M+ ++A+D+P   QY++ ++A  LF
Sbjct: 112 EGACADDLDVSLVVRRMKALVAQDAPIHMQYMTRQEALNLF 152


>gi|190892008|ref|YP_001978550.1| alanyl-tRNA synthetase [Rhizobium etli CIAT 652]
 gi|190697287|gb|ACE91372.1| alanyl-tRNA synthetase protein [Rhizobium etli CIAT 652]
          Length = 884

 Score = 44.3 bits (103), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 92/205 (44%), Gaps = 24/205 (11%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKM 126
           RS     HS  H++ EA++ +        G ++  +   +D    +P +++EL  +E+  
Sbjct: 555 RSRLRANHSATHLLHEALREVLGTHVAQKGSLVAPERLRFDVSHPKPMTAEELKIVEEMA 614

Query: 127 QEIIARDSPFLKQYLS-----HEKARELFESK--KEAYKVEILESIPAKENVTLYRQGEW 179
            EI+ +++P   + +S      E A  LF  K   E   V +   +   ++   Y     
Sbjct: 615 NEIVLQNAPVTTRLMSVDDAIAEGAMALFGEKYGDEVRVVSMGTGLHGAKSNKPYS---- 670

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVA-GAYWR------GDSNRPMLS----RIYGTAWNTQ 228
            +LC G HV +TGQ+     L + A GA  R      G+S R  L+    R+   A + +
Sbjct: 671 VELCGGTHVSATGQIGLVRILGESAVGAGVRRLEAVTGESARAYLAEQDDRVKTLAASLK 730

Query: 229 QELTQYLYFLEESEKRDHRKLAREM 253
            + ++ L  + E+   + RKL RE+
Sbjct: 731 VQPSEVLSRV-ETLIDERRKLEREL 754


>gi|320335628|ref|YP_004172339.1| alanyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
 gi|319756917|gb|ADV68674.1| alanyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
          Length = 894

 Score = 44.3 bits (103), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 34/134 (25%), Positives = 59/134 (44%), Gaps = 13/134 (9%)

Query: 75  HSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           H+  H++  A++++    V+ A   +  D   +DF      S+DE+AQ+E  +   +  D
Sbjct: 582 HTATHLLHAALRAVLGSGVRQAGSLVAPDRLRFDFTHGSALSADEVAQVEALVNRWVTAD 641

Query: 134 SPFLKQYLSHEKAR-----ELFESK--KEAYKVEILESIPAKENVTLYRQGEWFDLCRGP 186
            P   + +  ++AR      LF  K   E   V +   +P  +     R+     LC G 
Sbjct: 642 FPVTWRTMPIDEARASGAMALFGEKYGDEVRVVSVEGGVPFGDTEVASRE-----LCGGA 696

Query: 187 HVRSTGQVKKFFKL 200
           HV  TG++  F  L
Sbjct: 697 HVTRTGEIGAFVIL 710


>gi|224130834|ref|XP_002320936.1| predicted protein [Populus trichocarpa]
 gi|222861709|gb|EEE99251.1| predicted protein [Populus trichocarpa]
          Length = 508

 Score = 44.3 bits (103), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 70/300 (23%), Positives = 116/300 (38%), Gaps = 54/300 (18%)

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV- 393
           A++P +       F+  ++ +R+LP++L ++ +V R E S      +R R F   + H  
Sbjct: 117 AIRPTSETVMYPYFSKWIRGHRDLPLKLNQWCNVVRWEFSNPTP-FIRYREFLWQEGHTA 175

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
           F TK++   E L+I  L   IY++F                         A  I+KG   
Sbjct: 176 FATKQEADEEVLQILELYRRIYEEFL------------------------AIPIIKG--- 208

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF-NAFYVN 512
             K S  ++         G  Y    E  + +  GR  Q  T      L   F   F +N
Sbjct: 209 --KKSEMEKF-------AGGLYTTSVEAFIPNT-GRGIQGATSHC---LGQNFAKMFEIN 255

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMI---ENFKG-NLPLWLSPIQAIVTTI------TS 562
             +EK    M  +  +    R IG+M+    + KG  LP  +S +Q IV  +      T 
Sbjct: 256 FENEKGEKGMAWQNSWAYSTRTIGVMVMVHGDDKGLVLPPKVSSVQVIVVPVPFKDANTQ 315

Query: 563 SAVEYAQEIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
              +      + L    +  E D+R N +  +K     +K +P+ I  G K+ +     I
Sbjct: 316 GIFDACAATVDTLCEAGIRAEADYRENYSPGWKYSHWEMKGVPLRIEIGPKDLANNQASI 375


>gi|323669590|ref|NP_001191177.1| bifunctional aminoacyl-tRNA synthetase [Danio rerio]
          Length = 1511

 Score = 44.3 bits (103), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 70/333 (21%), Positives = 131/333 (39%), Gaps = 63/333 (18%)

Query: 334  FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
             A++P +       +   ++S+R+LP++L ++ +V R E        +R R F   + H 
Sbjct: 1115 IAVRPTSETVMYPAYAKWVQSHRDLPIKLNQWCNVVRWE-FKHPQPFLRTREFLWQEGHT 1173

Query: 394  -FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
             F TKE+   E L+I +L   +Y++     ++    T  EK  G D             +
Sbjct: 1174 AFATKEEATEEVLQILDLYARVYEELMAIPVVKGRKTEKEKFAGGD---------YTTTV 1224

Query: 453  DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
            +   ++S   I        G  +   FE + +D                 P      Y N
Sbjct: 1225 EAFISASGRAIQGATSHHLGQNFSRMFEIVFEDP--------------KKPGEKQLAYQN 1270

Query: 513  SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIV--TTITSSAVE 566
            S              +G   R IG++      N+ L L P    +Q I+    IT++  E
Sbjct: 1271 S--------------WGITTRTIGVLTMVHGDNMGLVLPPRVACLQVIIIPCGITATLPE 1316

Query: 567  YAQEI--------ANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASE- 616
              +++         + L+   + ++ D R N +  +K     +K +PI    G K+  + 
Sbjct: 1317 AEKDLLLDQCSKYLSRLQKADIRVKADLRDNYSPGWKFNHWELKGVPIRFEVGPKDLKQG 1376

Query: 617  RSIGIRRFGSTTTQKVSLLDA-----IPILTKE 644
            + + +RR    T +K+++ +A     IP L +E
Sbjct: 1377 QFVAVRR---DTGEKITVKEADAEKKIPNLLEE 1406


>gi|126653904|ref|ZP_01725751.1| alanyl-tRNA synthetase [Bacillus sp. B14905]
 gi|126589629|gb|EAZ83768.1| alanyl-tRNA synthetase [Bacillus sp. B14905]
          Length = 742

 Score = 44.3 bits (103), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 38/154 (24%), Positives = 73/154 (47%), Gaps = 15/154 (9%)

Query: 56  EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPF 114
           E +++ I   D R+L +  H+  HIM  A++ +  + V  A   +  D   +DF      
Sbjct: 412 EDAVQAIVNRDDRNLIIKNHTATHIMQRALKDVLGDHVNQAGSYVGPDRLRFDFSHFGQV 471

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESK--KEAYKVEILESIPAKENVT 172
           + +EL QIE+ + E +  D   + + ++ +KA+E+       E Y           + V 
Sbjct: 472 TKEELQQIERIVNEKVWDDIEVVIEEMAIDKAKEMGAMALFGEKY----------GDVVR 521

Query: 173 LYRQGEW-FDLCRGPHVRSTGQVKKFFKLMKVAG 205
           +   G++  +LC G HV+ + ++  FFK++   G
Sbjct: 522 VVSIGDYSIELCGGIHVKRSSEI-GFFKIVSEGG 554


>gi|92117171|ref|YP_576900.1| alanyl-tRNA synthetase [Nitrobacter hamburgensis X14]
 gi|91800065|gb|ABE62440.1| alanyl-tRNA synthetase [Nitrobacter hamburgensis X14]
          Length = 897

 Score = 44.3 bits (103), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 31/127 (24%), Positives = 60/127 (47%), Gaps = 8/127 (6%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++ EA++ +  +     G ++  +   +DF   +P S+DEL +IE    +++  +
Sbjct: 570 HSATHLLHEALRQVLGDHIAQRGSLVAPERLRFDFVHNKPISADELRRIEDIANDVVLEN 629

Query: 134 SPFLKQYLSHEKARE-----LFESK-KEAYKVEILESIPAKENVTLYRQGEWFDLCRGPH 187
                + ++ + ARE     LF  K  +  +V  + S   ++       G   +LC G H
Sbjct: 630 GEVTTRLMAVDDAREAGARALFGEKYGDEVRVVSMGST-GRQGAASNALGWSVELCGGTH 688

Query: 188 VRSTGQV 194
           V+ TG +
Sbjct: 689 VKRTGDI 695


>gi|293189858|ref|ZP_06608572.1| proline--tRNA ligase [Actinomyces odontolyticus F0309]
 gi|292821273|gb|EFF80218.1| proline--tRNA ligase [Actinomyces odontolyticus F0309]
          Length = 602

 Score = 44.3 bits (103), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 39/188 (20%), Positives = 79/188 (42%), Gaps = 11/188 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R     +I     G+  W   G +  + +   +R ++     +E++ P 
Sbjct: 19  DAEVNSHKLLVRA---GYIRRSAPGIYTWLPLGLRTLRKIEDIVREEMDAMGAQEVHFPG 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++    ++ +  W+ Y   +F  K  D    D   + L P +      +      SY++L
Sbjct: 76  LIPAEPYKATNRWEEYGPTLF--KLNDRKGGD---YLLAPTHEEMFTLLVKDMYSSYKDL 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH-NLIISIYKD 417
           P  L +  + YR+E +    GL+R R F   DA+ F   ++  N   +   +    I++ 
Sbjct: 131 PATLYQIQTKYRDE-ARPRAGLIRGREFVMKDAYSFDIDDEGLNASYQAERDTYERIFQR 189

Query: 418 FGFEKIMV 425
            G   ++V
Sbjct: 190 LGLRYVIV 197


>gi|218131142|ref|ZP_03459946.1| hypothetical protein BACEGG_02747 [Bacteroides eggerthii DSM 20697]
 gi|317476982|ref|ZP_07936224.1| prolyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA]
 gi|217986662|gb|EEC52996.1| hypothetical protein BACEGG_02747 [Bacteroides eggerthii DSM 20697]
 gi|316906775|gb|EFV28487.1| prolyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA]
          Length = 497

 Score = 44.3 bits (103), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 64/289 (22%), Positives = 126/289 (43%), Gaps = 56/289 (19%)

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLK 406
           + + + SYR+LP+   ++ +V+R E    L   +R   F   + H    T+E+   E ++
Sbjct: 135 YKNWINSYRDLPILCNQWANVFRWEMRTRL--FLRTAEFLWQEGHTAHATREEAEEEAVR 192

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           + N    +Y +F  EK M                   A  ++KGV      S+ +R    
Sbjct: 193 MLN----VYGEFA-EKYM-------------------AVPVVKGV-----KSANERF--- 220

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
                GA      E +++D  G+  Q GT   +  N    F+  +VN  ++  +   +  
Sbjct: 221 ----AGALNTYTIEAMMQD--GKALQSGTSHFLGQNFAKAFDVQFVNKENKLEY---VWA 271

Query: 526 AVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTITSSAVEYA---QEIANL---L 575
             +G   R +G +I     +    LP  L+PIQ ++  I  +A   A   +++A +   L
Sbjct: 272 TSWGVSTRLMGALIMTHSDDNGLVLPPHLAPIQVVIVPIYKNAEMLAKIDEKVAGIVAKL 331

Query: 576 KSHHLSIETD-FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRR 623
           KS  +S++ D   N+   +K  ++ +K +P+ ++ G ++    ++ + R
Sbjct: 332 KSMGISVKYDNADNKRPGFKFADYEVKGVPVRLVMGGRDLENNTMEVMR 380


>gi|160915433|ref|ZP_02077644.1| hypothetical protein EUBDOL_01441 [Eubacterium dolichum DSM 3991]
 gi|158432553|gb|EDP10842.1| hypothetical protein EUBDOL_01441 [Eubacterium dolichum DSM 3991]
          Length = 553

 Score = 44.3 bits (103), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 31/138 (22%), Positives = 68/138 (49%), Gaps = 7/138 (5%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  +G+      G ++ + +   +R ++     +E+  P ++ + +++ SG  D++ +
Sbjct: 22  IKKSSAGIYMIMPMGKRVLKKIEDIVREEMDAAGAQELLMPALIPEEVYEISGRRDAFGS 81

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
           NMFA+K   D  +  + + L P +            +SY++ P  L +  + +R+E +  
Sbjct: 82  NMFALK---DRYQ--KNYVLGPTHEELFTLAAMMKGRSYKDFPYNLYQIQTKFRDE-TRP 135

Query: 377 LHGLMRVRGFTQDDAHVF 394
            +GL+R R F   DA+ F
Sbjct: 136 RYGLIRTREFIMKDAYSF 153


>gi|154509145|ref|ZP_02044787.1| hypothetical protein ACTODO_01666 [Actinomyces odontolyticus ATCC
           17982]
 gi|153798779|gb|EDN81199.1| hypothetical protein ACTODO_01666 [Actinomyces odontolyticus ATCC
           17982]
          Length = 602

 Score = 44.3 bits (103), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 39/188 (20%), Positives = 79/188 (42%), Gaps = 11/188 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R     +I     G+  W   G +  + +   +R ++     +E++ P 
Sbjct: 19  DAEVNSHKLLVRA---GYIRRSAPGIYTWLPLGLRTLRKIEDIVREEMDAMGAQEVHFPG 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++    ++ +  W+ Y   +F  K  D    D   + L P +      +      SY++L
Sbjct: 76  LIPAEPYKATNRWEEYGPTLF--KLNDRKGGD---YLLAPTHEEMFTLLVKDMYSSYKDL 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH-NLIISIYKD 417
           P  L +  + YR+E +    GL+R R F   DA+ F   ++  N   +   +    I++ 
Sbjct: 131 PATLYQIQTKYRDE-ARPRAGLIRGREFVMKDAYSFDIDDEGLNASYQAERDTYERIFQR 189

Query: 418 FGFEKIMV 425
            G   ++V
Sbjct: 190 LGLRYVIV 197


>gi|110833037|ref|YP_691896.1| GTP pyrophosphokinase/guanosine-3',5'-bis(diphosphate)
           3'-pyrophosphohydrolase [Alcanivorax borkumensis SK2]
 gi|110646148|emb|CAL15624.1| GTP pyrophosphokinase/Guanosine-3',5'-bis(Diphosphate)
           3'-pyrophosphohydrolase [Alcanivorax borkumensis SK2]
          Length = 703

 Score = 44.3 bits (103), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 1/63 (1%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIE 60
           P +  +  P G IK  P  AT  D A ++   +  K VA  I+GK+  LS P+  G +++
Sbjct: 385 PDEAYVFTPKGDIKELPAGATAVDFAYAVHTKVGNKCVAARIDGKLAALSTPLESGQTVK 444

Query: 61  IIT 63
           IIT
Sbjct: 445 IIT 447


>gi|294677289|ref|YP_003577904.1| alanyl-tRNA synthetase [Rhodobacter capsulatus SB 1003]
 gi|294476109|gb|ADE85497.1| alanyl-tRNA synthetase [Rhodobacter capsulatus SB 1003]
          Length = 884

 Score = 44.3 bits (103), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 36/148 (24%), Positives = 65/148 (43%), Gaps = 16/148 (10%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPI-IEDGFYYDFDKEQPFSSDELAQIEKKM 126
           RS     HS  H++ EA++    +     G +  ED   +DF   +  +++EL  +E ++
Sbjct: 554 RSAIRANHSATHLLHEALRRALGDHVAQKGSLNAEDRLRFDFSHGKAMTAEELMTVEAEV 613

Query: 127 QEIIARDSPFLKQYLSHEKAREL------FESKKEAYKV----EILESIPAKENVTLYRQ 176
              I +++P   + ++ + AR L       E   +  +V    E+L S    +  T    
Sbjct: 614 NAFIRQNTPVETRIMTPDDARGLGAQALFGEKYGDEVRVVSMGELLGSGKGHDGRTYS-- 671

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVA 204
               +LC G HV+ TG +  F  L + A
Sbjct: 672 ---LELCGGTHVKRTGDIGAFVALGESA 696


>gi|325924500|ref|ZP_08186019.1| alanyl-tRNA synthetase [Xanthomonas gardneri ATCC 19865]
 gi|325544995|gb|EGD16330.1| alanyl-tRNA synthetase [Xanthomonas gardneri ATCC 19865]
          Length = 882

 Score = 44.3 bits (103), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 45/200 (22%), Positives = 80/200 (40%), Gaps = 28/200 (14%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKM 126
           R   ++ HS  H++  A++ +    VQ     +  D   +DF   QP +++ELA IE+K+
Sbjct: 563 RGKTILNHSATHLLHAALREVLGTHVQQKGSLVAPDRLRFDFSHFQPITAEELAVIERKV 622

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRG 185
              +  +       ++ ++A +        +    L      ENV + + G +  +LC G
Sbjct: 623 NAEVRTNHGVEVHNMAMQEALD--------FGAMALFGEKYGENVRVLKMGGYSTELCGG 674

Query: 186 PHVRSTGQVKKFFKLMKVAGAY----------------WRGDSNRPMLSRIYGTAWNTQQ 229
            HV  TG +   FK+    G                  +  D  R +L   +    N   
Sbjct: 675 THVTRTGDI-GLFKITSEGGVSSGVRRIEAVTGQGALDYVADEERRLLEAAHLLGGNA-T 732

Query: 230 ELTQYLYFLEESEKRDHRKL 249
           E+   +  L E +KR  R+L
Sbjct: 733 EVVDKVRALTERQKRLEREL 752


>gi|109065669|ref|XP_001105710.1| PREDICTED: 39S ribosomal protein L39, mitochondrial-like isoform 3
           [Macaca mulatta]
          Length = 338

 Score = 44.3 bits (103), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 46/192 (23%), Positives = 86/192 (44%), Gaps = 24/192 (12%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIR---HS 76
           +T    A  +S    +K++   ++G+  D+  P+ +   I+ +T +D     V +    S
Sbjct: 86  STPYSCAMHLSEWYCRKSILALVDGQPWDMYKPLTKSCEIKFLTFKDRDPGEVNKAYWRS 145

Query: 77  CAHIMAEAVQSIWPE------VQVAIGPIIEDGFYYD------FDKEQPFSSDELAQIEK 124
           CA +M   ++  + +      V+    P+I   F YD       D+  P + + L    K
Sbjct: 146 CAMMMGCVIERAFKDEYMVNLVRAPEVPVISGAFCYDVVLDSKLDEWMP-TKENLRSFTK 204

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN----VTLYRQGEWF 180
               +I +D PF    +  + A E+F+  K  YK++ +E   A +N    V L+R G++ 
Sbjct: 205 DAHALIYKDLPFETLEVEAKVALEIFQHNK--YKIDFIEE-KASQNPERIVKLHRIGDFI 261

Query: 181 DLCRGPHVRSTG 192
           D+  GP +  T 
Sbjct: 262 DVSEGPLIPRTS 273


>gi|294660251|ref|NP_852904.2| alanyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)]
 gi|83305848|sp|Q7NBY8|SYA_MYCGA RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|284811906|gb|AAP56472.2| alanyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)]
 gi|284930365|gb|ADC30304.1| alanyl-tRNA synthetase [Mycoplasma gallisepticum str. R(high)]
          Length = 902

 Score = 44.3 bits (103), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 44/184 (23%), Positives = 82/184 (44%), Gaps = 21/184 (11%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSD 117
           +E++  E+ R L    HS  HI+   +++   E     G          DF+     + +
Sbjct: 551 VELMHDENWRKLVRKNHSLEHILHATLKNTISETIKQSGAFKSAAKATLDFNYPTRLTDE 610

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKAREL-----FESKKEAYKVEILESIPAKENVT 172
           +L +IE KM+++IA   P    ++ +E ++++     FE  +E  K E+L  I       
Sbjct: 611 DLDKIETKMRQVIADKIPVTVHHVDYETSQKMNAIAYFE--EEYKKHELLRVI------- 661

Query: 173 LYRQGEW-FDLCRGPHVRSTGQVKKFF--KLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQ 229
             + G++  +LC G HV +T ++++ F   L  +    WR +        IY    + Q 
Sbjct: 662 --KIGDYSVELCGGTHVDNTKEIEECFITNLYSLGAGRWRIEI-MSSYETIYNYLVDKQN 718

Query: 230 ELTQ 233
           E+ Q
Sbjct: 719 EIKQ 722


>gi|54026044|ref|YP_120286.1| prolyl-tRNA synthetase [Nocardia farcinica IFM 10152]
 gi|81822939|sp|Q5YSB9|SYP_NOCFA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|54017552|dbj|BAD58922.1| putative prolyl-tRNA synthetase [Nocardia farcinica IFM 10152]
          Length = 585

 Score = 44.3 bits (103), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 42/195 (21%), Positives = 81/195 (41%), Gaps = 17/195 (8%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +  +A    GV  W   G ++ + +   +R ++     +EI+ P 
Sbjct: 19  DAEVPSHKLLVRAGYVRRVA---PGVYSWLPLGLRVLRKVEDVVRAEMNAIGGQEISLPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAV---KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           +L +  ++ +  W  Y  ++F +   K AD        + L P +             SY
Sbjct: 76  LLPRDPYETTNRWTEYGDSLFRLHDRKGAD--------YLLGPTHEELFALTVKGEYNSY 127

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS-I 414
           ++LPV L +  + YR+E      G++R R F   D++ F   E         H      I
Sbjct: 128 KDLPVTLYQIQTKYRDEER-PRAGILRGREFVMKDSYSFDLDEDGLKASYNAHREAYQRI 186

Query: 415 YKDFGFEKIMVKLST 429
           +   G + ++V  ++
Sbjct: 187 FDRLGVKYVIVAATS 201


>gi|315122762|ref|YP_004063251.1| alanyl-tRNA synthetase [Candidatus Liberibacter solanacearum
           CLso-ZC1]
 gi|313496164|gb|ADR52763.1| alanyl-tRNA synthetase [Candidatus Liberibacter solanacearum
           CLso-ZC1]
          Length = 906

 Score = 44.3 bits (103), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 72/142 (50%), Gaps = 14/142 (9%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSD 117
           I  I  +D R L+ I HS  H++  A+++I  P V      II +   +D    +P + +
Sbjct: 576 ILTINYQDRRQLS-INHSATHLLHAALRTILGPHVSQKGSHIIPERLRFDIVHSKPITRE 634

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKA-----RELFESKKEAYKVEILESIPAKENVT 172
           E+  I+  + ++IA++   + + ++ + A       LF  KK + KV ++ SI + +   
Sbjct: 635 EIKLIQDHINDVIAQNYSIITRIMNIDDAIASGSSALF-GKKYSDKVRVV-SIESDDG-R 691

Query: 173 LYRQGEWFDLCRGPHVRSTGQV 194
           +Y      +LC G HV STG++
Sbjct: 692 VYAS----ELCGGTHVSSTGEI 709


>gi|189424968|ref|YP_001952145.1| prolyl-tRNA synthetase [Geobacter lovleyi SZ]
 gi|226701293|sp|B3E1X5|SYP_GEOLS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|189421227|gb|ACD95625.1| prolyl-tRNA synthetase [Geobacter lovleyi SZ]
          Length = 576

 Score = 44.3 bits (103), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 36/148 (24%), Positives = 67/148 (45%), Gaps = 20/148 (13%)

Query: 504 SRFNAFYVNSHSEK------CHPVMIHRAVFGSIERFIGIMIENFKGNLPLW---LSPIQ 554
           S  NA Y++   ++      C+ + I R V  SIE       +N   N  +W   L+P  
Sbjct: 421 SSMNATYLDKDGKEQIIFMGCYGIGIGRTVAASIE-------QNHDENGVIWPLPLAPFH 473

Query: 555 AIVTTITS----SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
             V  I +    + +  AQ+I + L++  + +  D R+E    K ++H +  IP+ I+ G
Sbjct: 474 CSVVAINAQKDEAVMAAAQDIHDRLEAAGVEVLLDDRDERPGVKFKDHDLIGIPLRIVVG 533

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAI 638
            K  +E ++  ++      Q ++   AI
Sbjct: 534 GKNLAEGNVEFKQRAGGEMQLLAPEQAI 561



 Score = 41.6 bits (96), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 43/102 (42%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P V    LW +S  W  Y   +   K   D       F + P +      +    +
Sbjct: 68  ELLMPGVQPAELWIESKRWAQYGKELLRFKDRKDN-----EFCMGPTHEEIITDIARREV 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSYR++PV   +  + +R+E      GLMR R F   DA+ F
Sbjct: 123 KSYRQMPVNFYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSF 163


>gi|312792775|ref|YP_004025698.1| aaa atpase [Caldicellulosiruptor kristjanssonii 177R1B]
 gi|312179915|gb|ADQ40085.1| AAA ATPase [Caldicellulosiruptor kristjanssonii 177R1B]
          Length = 554

 Score = 44.3 bits (103), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 38/160 (23%), Positives = 78/160 (48%), Gaps = 4/160 (2%)

Query: 39  VAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIG 97
           VA  ++ ++ +L   + R+  ++ I       + + R S   ++  A + ++ E  V + 
Sbjct: 43  VAAKVDNEIKELKYVISRDCKVKFIDMTQEDGMRIYRRSLIFVLIVATRMLFKEA-VNVQ 101

Query: 98  PIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAY 157
             +  G Y + +  +  S  ++  I++KM+ I+ +D  F ++ +S ++A  LFE K    
Sbjct: 102 HSLSKGLYCEVENRK-LSVQDIKLIKQKMKWIVEQDFQFRREKVSKDEAVRLFEEKGFYD 160

Query: 158 KVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
           K   ++     E+V +Y  G++ D   G  V STG +K F
Sbjct: 161 KARTIK-FSENEHVYIYYCGDYVDYFYGHLVPSTGYLKIF 199


>gi|294788637|ref|ZP_06753879.1| proline--tRNA ligase [Simonsiella muelleri ATCC 29453]
 gi|294483514|gb|EFG31199.1| proline--tRNA ligase [Simonsiella muelleri ATCC 29453]
          Length = 571

 Score = 44.3 bits (103), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 31/138 (22%), Positives = 57/138 (41%), Gaps = 7/138 (5%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I  + SG+  W   G ++ + + + +R ++ +    E+  P +    LW++SG W  Y  
Sbjct: 32  IKANASGLYTWMPMGLRVLRKVENIVREEMNRVGCVELLMPVIQSADLWKESGRWQFYGD 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            +  +    D       F   P        +    + SY++LP       + +R+E    
Sbjct: 92  ELLRITDRHDN-----EFCFSPTCEEMITDIVRKEINSYKQLPKNFYHINTKFRDERRPR 146

Query: 377 LHGLMRVRGFTQDDAHVF 394
             G+MR R F   DA+ F
Sbjct: 147 F-GVMRAREFVMKDAYSF 163


>gi|205830261|sp|Q1QMV7|SYA_NITHX RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
          Length = 891

 Score = 44.3 bits (103), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 31/127 (24%), Positives = 60/127 (47%), Gaps = 8/127 (6%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++ EA++ +  +     G ++  +   +DF   +P S+DEL +IE    +++  +
Sbjct: 564 HSATHLLHEALRQVLGDHIAQRGSLVAPERLRFDFVHNKPISADELRRIEDIANDVVLEN 623

Query: 134 SPFLKQYLSHEKARE-----LFESK-KEAYKVEILESIPAKENVTLYRQGEWFDLCRGPH 187
                + ++ + ARE     LF  K  +  +V  + S   ++       G   +LC G H
Sbjct: 624 GEVTTRLMAVDDAREAGARALFGEKYGDEVRVVSMGST-GRQGAASNALGWSVELCGGTH 682

Query: 188 VRSTGQV 194
           V+ TG +
Sbjct: 683 VKRTGDI 689


>gi|15897317|ref|NP_341922.1| threonyl-tRNA synthetase [Sulfolobus solfataricus P2]
 gi|284173344|ref|ZP_06387313.1| threonyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
 gi|13813530|gb|AAK40712.1| Threonyl-tRNA synthetase homolog (thrS-like) [Sulfolobus
           solfataricus P2]
 gi|261601991|gb|ACX91594.1| Threonyl-tRNA synthetase editing domain protein [Sulfolobus
           solfataricus 98/2]
          Length = 386

 Score = 44.3 bits (103), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 18/77 (23%), Positives = 42/77 (54%)

Query: 546 LPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPI 605
           LP WL+PIQ  +  +    ++++ ++A  L+   + +  D  ++++  KIR      IP 
Sbjct: 269 LPDWLNPIQVRLLPVKKDFLDFSIQVAERLRKEGIRVNIDDLDDSLGNKIRRAGTDWIPF 328

Query: 606 IIICGDKEASERSIGIR 622
           +I+ G++E    ++ ++
Sbjct: 329 VIVIGEREVKTNTLTVK 345


>gi|205830243|sp|Q1GHA1|SYA_SILST RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
          Length = 883

 Score = 44.3 bits (103), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 33/138 (23%), Positives = 62/138 (44%), Gaps = 5/138 (3%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPI-IEDGFYYDFDKEQPFSSDELAQIEKKM 126
           RS     HS  H++ EA+++   +     G +   D   +DF   +  S+++L++I  ++
Sbjct: 555 RSQIRANHSATHLLHEALRNALGDHVAQKGSLNAADRLRFDFSHNKAVSAEDLSKISAEV 614

Query: 127 QEIIARDSPFLKQYLSHEKARELFESK--KEAYKVEILESIPAKENVTLYRQGEWF--DL 182
            + I ++S    + ++ + AR L       E Y  E+      +        GE +  +L
Sbjct: 615 NDFIRQNSAVSTRIMTPDDARALGAQALFGEKYGEEVRVVSMGRAPTGKGADGETYSIEL 674

Query: 183 CRGPHVRSTGQVKKFFKL 200
           C G HV+ TG +  F  L
Sbjct: 675 CGGTHVKQTGDIGTFVIL 692


>gi|294634755|ref|ZP_06713284.1| alanine--tRNA ligase [Edwardsiella tarda ATCC 23685]
 gi|291091814|gb|EFE24375.1| alanine--tRNA ligase [Edwardsiella tarda ATCC 23685]
          Length = 875

 Score = 44.3 bits (103), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 33/132 (25%), Positives = 57/132 (43%), Gaps = 20/132 (15%)

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY-YDFDKEQPFSSDELAQIEKKMQEIIA 131
           + HS  H+M  A++S+        G ++ DG+  +DF   +     ++ Q+E+ +   I 
Sbjct: 562 LSHSATHLMHAALRSVLGTHVAQKGSLVNDGYLRFDFSHPEAMKPQQIRQVEEIVNAQIR 621

Query: 132 RDSPFLKQYLSHEKAR-----ELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRG 185
           R+ P   Q +  E+A+      LF  K +A              V +   GE+  +LC G
Sbjct: 622 RNLPIETQEMGLEEAKAKGAMALFGEKYDA-------------QVRVLSMGEFSTELCGG 668

Query: 186 PHVRSTGQVKKF 197
            H   TG +  F
Sbjct: 669 THAERTGDIGLF 680


>gi|84500806|ref|ZP_00999041.1| alanyl-tRNA synthetase [Oceanicola batsensis HTCC2597]
 gi|84390873|gb|EAQ03291.1| alanyl-tRNA synthetase [Oceanicola batsensis HTCC2597]
          Length = 892

 Score = 44.3 bits (103), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 59/134 (44%), Gaps = 7/134 (5%)

Query: 71  AVIR--HSCAHIMAEAVQSIWPEVQVAIGPI-IEDGFYYDFDKEQPFSSDELAQIEKKMQ 127
           A IR  HS  H++ EA++    +     G +   D   +DF      S +ELA+IE+ + 
Sbjct: 562 ATIRANHSATHLLHEALREALGDHVAQRGSLNAPDRLRFDFSHSAALSPEELARIERDVN 621

Query: 128 EIIARDSPFLKQYLSHEKARELFESK--KEAYKVEILESIPAKENVTLYRQGEWF--DLC 183
             I +++P   + ++ + AR L       E Y  E+      ++       G  +  +LC
Sbjct: 622 AFIRQNTPVETRIMTPDDARGLGAQALFGEKYGDEVRVVSMGQKATGKGAGGNTYSIELC 681

Query: 184 RGPHVRSTGQVKKF 197
            G HV  TG +  F
Sbjct: 682 GGTHVARTGDIGAF 695


>gi|146319436|ref|YP_001199148.1| seryl-tRNA synthetase [Streptococcus suis 05ZYH33]
 gi|145690242|gb|ABP90748.1| Seryl-tRNA synthetase [Streptococcus suis 05ZYH33]
          Length = 428

 Score = 44.3 bits (103), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 44/213 (20%), Positives = 89/213 (41%), Gaps = 24/213 (11%)

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFH----IAEDGSGVIFWHRKGWKIFQTLI 280
           W T +E T         E + H  L  ++D+          G+  +F+   G ++ + L 
Sbjct: 170 WGTPREFT--------FEPKAHWDLGEDLDILDWERGAKVTGARFLFYKNLGARLERALY 221

Query: 281 SYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPM 339
           ++M  + I + Y+EI TP +++      +G +  ++ + F +    DT      F L P 
Sbjct: 222 NFMLDEHIAEGYQEIITPYMVNHDSMFGTGQYPKFKEDTFELA---DT-----NFVLIPT 273

Query: 340 NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCT 396
                   + + +   ++LP+        +R+E   +     GL+R+  F + +   F T
Sbjct: 274 AEVPLTNYYRNEILEEKDLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAT 333

Query: 397 KEQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
            EQ ++E  K+     +I +  G    ++ L T
Sbjct: 334 PEQSYDELEKMTANAENILQKLGLPYRVLALCT 366


>gi|332229343|ref|XP_003263849.1| PREDICTED: 39S ribosomal protein L39, mitochondrial isoform 1
           [Nomascus leucogenys]
          Length = 338

 Score = 44.3 bits (103), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 43/191 (22%), Positives = 86/191 (45%), Gaps = 22/191 (11%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIR---HS 76
           +T    A  +S    +K++   ++G+  D+  P+ +   I+ +T +D     V +    S
Sbjct: 86  STPYSCAMHLSEWYCRKSILALVDGQPWDMYKPLTKSCEIKFLTFKDRDPGEVNKAYWRS 145

Query: 77  CAHIMAEAVQSIWPE------VQVAIGPIIEDGFYYD------FDKEQPFSSDELAQIEK 124
           CA +M   ++  + +      V+    P+I   F YD       D+  P + + L    K
Sbjct: 146 CAMMMGCVIERAFKDEYVVNLVRAPEVPVISGAFCYDVVLDSKLDEWMP-TKENLRSFTK 204

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN---VTLYRQGEWFD 181
               +I +D PF    +  + A E+F+  K  YK++ +E   ++ +   + L+R G++ D
Sbjct: 205 DAHALIYKDLPFETLEVEAKVALEIFQHNK--YKIDFIEEKASQNSERIIKLHRIGDFID 262

Query: 182 LCRGPHVRSTG 192
           +  GP +  T 
Sbjct: 263 VSEGPLIPRTS 273


>gi|331091263|ref|ZP_08340104.1| alanyl-tRNA synthetase 1 [Lachnospiraceae bacterium 2_1_46FAA]
 gi|330404710|gb|EGG84249.1| alanyl-tRNA synthetase 1 [Lachnospiraceae bacterium 2_1_46FAA]
          Length = 879

 Score = 44.3 bits (103), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 38/163 (23%), Positives = 79/163 (48%), Gaps = 12/163 (7%)

Query: 45  GKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDG 103
           GKV   S  V + ++ +   E+ R+     HS  H++ +A++++    V+     +  D 
Sbjct: 537 GKVTKGSFTVGD-AVNLSVEENGRANTCKNHSATHLLQKALKTVLGSHVEQKGSLVTPDR 595

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE 163
             +DF      + +E+A+ E+ +   IA+++  + + ++ E+A+        A     L 
Sbjct: 596 LRFDFVHFSAMTPEEIAKTEELVNAEIAKNNAVITEVMNIEQAK--------ATGAMALF 647

Query: 164 SIPAKENVTLYRQGEWF-DLCRGPHVRSTGQVKKFFKLMKVAG 205
               +E+V +   G++  +LC G HV +TG +   FK++  AG
Sbjct: 648 GEKYEEDVRVVSMGDFSKELCGGTHVANTGMITT-FKILSEAG 689


>gi|312135147|ref|YP_004002485.1| alanyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
 gi|311775198|gb|ADQ04685.1| alanyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
          Length = 879

 Score = 44.3 bits (103), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 45/190 (23%), Positives = 84/190 (44%), Gaps = 20/190 (10%)

Query: 54  VREGSIEIITP------EDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYY 106
           V +G I +++       ED R   +  H+  H++  A++ I  +  Q +   +  D   +
Sbjct: 535 VLKGEISVLSSVVAKVDEDLRFATMKNHTATHLLHSALRKILGQHAQQSGSQVSPDRLRF 594

Query: 107 DFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIP 166
           DF   +P S +++ +IEK +  +I +  P  K     + A  +        K   L  + 
Sbjct: 595 DFAHYEPLSEEQIIEIEKMVNNVIQQAIPVEKIVTDLDSALRMGAIALFDEKYSNLVRVI 654

Query: 167 AKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLM---KVAGAYWRGDSNRPMLSRIYGT 223
             ++ ++       +LC G HV +TGQ+   FK++    VA    R ++     +++Y  
Sbjct: 655 KIDDFSM-------ELCGGTHVDNTGQI-GMFKIISESSVAAGVRRIEAITG--NKVYEF 704

Query: 224 AWNTQQELTQ 233
             NTQQ L Q
Sbjct: 705 ILNTQQTLKQ 714


>gi|255284141|ref|ZP_05348696.1| alanine--tRNA ligase [Bryantella formatexigens DSM 14469]
 gi|255265315|gb|EET58520.1| alanine--tRNA ligase [Bryantella formatexigens DSM 14469]
          Length = 879

 Score = 44.3 bits (103), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 32/125 (25%), Positives = 60/125 (48%), Gaps = 10/125 (8%)

Query: 75  HSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++ +A++++    V+     +  D   +DF    P +++E+A+ E  + E IA  
Sbjct: 566 HSATHLLQKALKTVLGAHVEQKGSLVTPDRLRFDFAHFAPMTAEEIAKTEALVNEQIAAS 625

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF-DLCRGPHVRSTG 192
            P + Q ++ E      E+KK        E     ++V +   G++  +LC G HV +TG
Sbjct: 626 LPVVTQIMNIE------EAKKTGAMALFGEKYA--DDVRVVSMGDFSKELCGGTHVSNTG 677

Query: 193 QVKKF 197
            +  F
Sbjct: 678 MITTF 682


>gi|187931901|ref|YP_001891886.1| alanyl-tRNA synthetase [Francisella tularensis subsp. mediasiatica
           FSC147]
 gi|205830096|sp|B2SH99|SYA_FRATM RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|187712810|gb|ACD31107.1| alanyl-tRNA synthetase [Francisella tularensis subsp. mediasiatica
           FSC147]
          Length = 865

 Score = 44.3 bits (103), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 34/133 (25%), Positives = 58/133 (43%), Gaps = 10/133 (7%)

Query: 67  PRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFSSDELAQIEKK 125
           PR      HS  H++ +A++ +        G ++ ED   +DF  ++  S  E+ QIE  
Sbjct: 546 PRLATAANHSATHLLHKALKLVLGGHAEQKGSLVDEDRLRFDFTHDKAISRSEIEQIELL 605

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCR 184
           + + I  + P     +S +KA+ L          E L      + V +   G++  +LC 
Sbjct: 606 VNQQIRANYPVTTIEISQQKAKSL--------GAEALFGEKYGDIVRVISMGDFSIELCG 657

Query: 185 GPHVRSTGQVKKF 197
           G HV  TG +  F
Sbjct: 658 GTHVAYTGDIGLF 670


>gi|163759600|ref|ZP_02166685.1| alanyl-tRNA synthetase [Hoeflea phototrophica DFL-43]
 gi|162283197|gb|EDQ33483.1| alanyl-tRNA synthetase [Hoeflea phototrophica DFL-43]
          Length = 884

 Score = 44.3 bits (103), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 31/126 (24%), Positives = 60/126 (47%), Gaps = 8/126 (6%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++ EA++ +        G ++  +   +D    +P +++EL+++E    EII ++
Sbjct: 564 HSATHLLHEALREVLGTHVAQKGSLVAPERLRFDVSHPKPMTAEELSEVETMANEIILQN 623

Query: 134 SPFLKQYLS-----HEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           SP   + ++      E A  LF  +K   +V ++        V   R     +LC G HV
Sbjct: 624 SPVTTRLMAVDDAIAEGAMALF-GEKYGDEVRVVSMGTGVRGVKANRP-YSVELCGGTHV 681

Query: 189 RSTGQV 194
            +TG++
Sbjct: 682 AATGEI 687


>gi|15644148|ref|NP_229197.1| alanyl-tRNA synthetase [Thermotoga maritima MSB8]
 gi|6707752|sp|Q9X1B6|SYA_THEMA RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|4981959|gb|AAD36467.1|AE001792_7 alanyl-tRNA synthetase [Thermotoga maritima MSB8]
          Length = 863

 Score = 44.3 bits (103), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 68/155 (43%), Gaps = 19/155 (12%)

Query: 50  LSDPVREGSIEIITPEDPRSLAVIR-HSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYD 107
           L   +R G   I+  +  R  A +R H+  H++  A++ +  + V+ A   +  D   +D
Sbjct: 535 LDGTLRRGQKVILRVDKKRREATMRNHTATHLLHAALKKVLGDHVRQAGSLVAPDRLRFD 594

Query: 108 FDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEIL 162
           F   +  SS E+ Q+E  + E I    P   +Y S+E+A +     LF  K       + 
Sbjct: 595 FTHFKGLSSAEIEQVEDLVNEWIMEAIPVEVRYTSYEEAVKSGVVALFTEKYGDVVRVVE 654

Query: 163 ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
               +KE            LC G HV++TGQ+  F
Sbjct: 655 VPGVSKE------------LCGGTHVKNTGQIGLF 677


>gi|307945634|ref|ZP_07660970.1| alanyl-tRNA synthetase [Roseibium sp. TrichSKD4]
 gi|307771507|gb|EFO30732.1| alanyl-tRNA synthetase [Roseibium sp. TrichSKD4]
          Length = 888

 Score = 43.9 bits (102), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 60/128 (46%), Gaps = 12/128 (9%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++ EA++ +        G ++  +   +DF   +P S +ELA  EK   EI+ ++
Sbjct: 563 HSATHLVHEALREVLGTHVAQKGSMVSPERLRFDFSHPKPLSDEELAVTEKFANEIVLQN 622

Query: 134 SPFLKQYLSHEKARE-----LFESK--KEAYKVEILESIPAKENVTLYRQGEWFDLCRGP 186
           +P   + ++ + A E     LF  K   E   V +  ++  ++    Y      +LC G 
Sbjct: 623 APVETRLMAVDDAIEAGAMALFGEKYGDEVRVVSMGTALHGEKEGKPYS----LELCGGT 678

Query: 187 HVRSTGQV 194
           HV+ TG +
Sbjct: 679 HVKRTGDI 686


>gi|251793474|ref|YP_003008203.1| alanyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
 gi|247534870|gb|ACS98116.1| alanyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
          Length = 874

 Score = 43.9 bits (102), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 29/142 (20%), Positives = 63/142 (44%), Gaps = 10/142 (7%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY-YDFDKEQPFSS 116
           S+  +  +  R    + HS  H++  A++ +  E     G ++ D    +DF   +  S 
Sbjct: 546 SVNAVVDDVRRQQISLNHSATHLLHAALRQVLGEHVAQKGSLVSDALLRFDFAHHEAISK 605

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
           ++LA++E+ + + +  ++P   + ++ + A+        A     L      E V +   
Sbjct: 606 EQLAEVERIVNQQVRANNPVQTEAMALDAAK--------AKGAMALFGEKYSEQVRVLTM 657

Query: 177 GEW-FDLCRGPHVRSTGQVKKF 197
           G++  +LC G H + TG +  F
Sbjct: 658 GDFSIELCGGIHAKRTGDIGLF 679


>gi|332871259|ref|XP_514842.3| PREDICTED: 39S ribosomal protein L39, mitochondrial isoform 3 [Pan
           troglodytes]
          Length = 338

 Score = 43.9 bits (102), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 46/192 (23%), Positives = 86/192 (44%), Gaps = 24/192 (12%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIR---HS 76
           +T    A  +S    +K++   ++G+  D+  P+ +   I+ +T +D     V +    S
Sbjct: 86  STPYSCAMHLSEWYCRKSILALVDGQPWDMYKPLTKSCEIKFLTFKDRDPGEVNKAYWRS 145

Query: 77  CAHIMAEAVQSIWPE------VQVAIGPIIEDGFYYD------FDKEQPFSSDELAQIEK 124
           CA +M   ++  + +      V+    P+I   F YD       D+  P + + L    K
Sbjct: 146 CAMMMGYVIERAFKDEYMVNLVRAPEVPVISGAFCYDVVLDSKLDEWMP-TKENLRSFTK 204

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN----VTLYRQGEWF 180
               +I +D PF    +  + A E+F+  K  YK++ +E   A +N    V L+R G++ 
Sbjct: 205 DAHALIYKDLPFETLEVEAKVALEIFQHSK--YKIDFIEE-KASQNPERIVKLHRIGDFI 261

Query: 181 DLCRGPHVRSTG 192
           D+  GP +  T 
Sbjct: 262 DVSEGPLIPRTS 273


>gi|302382286|ref|YP_003818109.1| alanyl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264]
 gi|302192914|gb|ADL00486.1| alanyl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264]
          Length = 881

 Score = 43.9 bits (102), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 34/140 (24%), Positives = 66/140 (47%), Gaps = 15/140 (10%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEK 124
           D R      HS AH++  A++++        G +++ +   +DF    P + DELA+IE 
Sbjct: 555 DARLTTRANHSAAHLVHAALKNVLGPHVAQKGQLVDAERMRFDFSHNAPLTEDELARIET 614

Query: 125 KMQEIIARDSPFLKQYLSHEKARE-----LFESK--KEAYKVEILESIPAKENVTLYRQG 177
           ++  +I ++ P   + +  ++A E     LF  K   E   + + +S+ + +  ++    
Sbjct: 615 EVNAVIRQNLPAETKLMGPQEAIEAGAVALFGEKYGDEVRVLTLGKSLTSDKPYSV---- 670

Query: 178 EWFDLCRGPHVRSTGQVKKF 197
              +LC G HV  TG +  F
Sbjct: 671 ---ELCGGTHVARTGDIGLF 687


>gi|146321639|ref|YP_001201350.1| hypothetical protein SSU98_1792 [Streptococcus suis 98HAH33]
 gi|145692445|gb|ABP92950.1| SerS [Streptococcus suis 98HAH33]
 gi|292559062|gb|ADE32063.1| SerS [Streptococcus suis GZ1]
          Length = 467

 Score = 43.9 bits (102), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 44/213 (20%), Positives = 89/213 (41%), Gaps = 24/213 (11%)

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFH----IAEDGSGVIFWHRKGWKIFQTLI 280
           W T +E T         E + H  L  ++D+          G+  +F+   G ++ + L 
Sbjct: 170 WGTPREFT--------FEPKAHWDLGEDLDILDWERGAKVTGARFLFYKNLGARLERALY 221

Query: 281 SYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPM 339
           ++M  + I + Y+EI TP +++      +G +  ++ + F +    DT      F L P 
Sbjct: 222 NFMLDEHIAEGYQEIITPYMVNHDSMFGTGQYPKFKEDTFELA---DT-----NFVLIPT 273

Query: 340 NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCT 396
                   + + +   ++LP+        +R+E   +     GL+R+  F + +   F T
Sbjct: 274 AEVPLTNYYRNEILEEKDLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAT 333

Query: 397 KEQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
            EQ ++E  K+     +I +  G    ++ L T
Sbjct: 334 PEQSYDELEKMTANAENILQKLGLPYRVLALCT 366


>gi|50419495|ref|XP_458274.1| DEHA2C13706p [Debaryomyces hansenii CBS767]
 gi|49653940|emb|CAG86351.1| DEHA2C13706p [Debaryomyces hansenii]
          Length = 682

 Score = 43.9 bits (102), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 69/311 (22%), Positives = 113/311 (36%), Gaps = 56/311 (18%)

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
            A++P +       +   ++S+R+LP++L ++ SV R E        +R R F   + H 
Sbjct: 281 IAIRPTSETVMYPYYAKWIRSHRDLPLKLNQWNSVVRWEFKHP-QPFLRTREFLWQEGHT 339

Query: 394 -FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
              TKE    E  +I +L   IY++     ++    T  EK  G D              
Sbjct: 340 AHLTKESAAEEVEQILDLYAGIYEELLAVPVVKGKKTENEKFAGGD-------------- 385

Query: 453 DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYV 511
                                 Y    E  + +  GR  Q  T   +  N    FN    
Sbjct: 386 ----------------------YTTTCEGFIAET-GRGIQGATSHHLGTNFSKMFNISVE 422

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTTITSSAV-- 565
           N        V   +  +G   R IG+M+     N  L L P     Q +V  +  +A   
Sbjct: 423 NPEGADKPRVHAFQNSWGLSTRVIGVMVMTHSDNKGLVLPPRVAQTQVVVIPVGLTAKTP 482

Query: 566 --------EYAQEIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKE-AS 615
                   + A  I ++LK   + +  D+R N +  +K     +K  P+ +  G K+ AS
Sbjct: 483 DEQRKAINDGAANIEHILKQTDVRVTGDYRDNYSPGWKFSNWELKGTPLRLEFGPKDLAS 542

Query: 616 ERSIGIRRFGS 626
           E+   +RR  S
Sbjct: 543 EQVTAVRRDNS 553


>gi|99081073|ref|YP_613227.1| alanyl-tRNA synthetase [Ruegeria sp. TM1040]
 gi|99037353|gb|ABF63965.1| alanyl-tRNA synthetase [Ruegeria sp. TM1040]
          Length = 902

 Score = 43.9 bits (102), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 33/138 (23%), Positives = 62/138 (44%), Gaps = 5/138 (3%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPI-IEDGFYYDFDKEQPFSSDELAQIEKKM 126
           RS     HS  H++ EA+++   +     G +   D   +DF   +  S+++L++I  ++
Sbjct: 574 RSQIRANHSATHLLHEALRNALGDHVAQKGSLNAADRLRFDFSHNKAVSAEDLSKISAEV 633

Query: 127 QEIIARDSPFLKQYLSHEKARELFESK--KEAYKVEILESIPAKENVTLYRQGEWF--DL 182
            + I ++S    + ++ + AR L       E Y  E+      +        GE +  +L
Sbjct: 634 NDFIRQNSAVSTRIMTPDDARALGAQALFGEKYGEEVRVVSMGRAPTGKGADGETYSIEL 693

Query: 183 CRGPHVRSTGQVKKFFKL 200
           C G HV+ TG +  F  L
Sbjct: 694 CGGTHVKQTGDIGTFVIL 711


>gi|330993337|ref|ZP_08317272.1| Alanyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1]
 gi|329759367|gb|EGG75876.1| Alanyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1]
          Length = 861

 Score = 43.9 bits (102), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 11/138 (7%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPI-IEDGFYYDFDKEQPFSSDELAQIEK 124
           D RS     HS  H++ EA++          G +   D   +D  + +P + +ELA IE 
Sbjct: 533 DRRSAIRAHHSATHLLHEAMRRRLGAHVTQKGSLNAPDRLRFDVSQPRPITPEELADIEA 592

Query: 125 KMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           ++   I  ++    ++++ E+A E     LF  +K   +V ++     +E     R G  
Sbjct: 593 EVNARIRENTDVTTRHMTPEEAIEQGAMALF-GEKYGDEVRVVSMGGPEEG----RAGWS 647

Query: 180 FDLCRGPHVRSTGQVKKF 197
            +LC G HVR TG +  F
Sbjct: 648 IELCGGTHVRRTGDIGLF 665


>gi|78777058|ref|YP_393373.1| prolyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251]
 gi|114152275|sp|Q30S93|SYP_SULDN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|78497598|gb|ABB44138.1| Prolyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251]
          Length = 435

 Score = 43.9 bits (102), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 70/340 (20%), Positives = 134/340 (39%), Gaps = 51/340 (15%)

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SG  ++    M  +       +    F L P N    V +  + + SY++LP+ L 
Sbjct: 79  LWERSGRSEAMGKEMLRI-----NDRHQNEFVLSPTNEEAMVELVKNRVTSYKDLPLNLY 133

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQ-MFNECLKIHNLIISIYKDFGFEK 422
           +  + +R+E     +GL+R R F   D + F +  Q M  E   +      I+   G + 
Sbjct: 134 QINTKFRDEAR-PRYGLLRGREFLMKDGYSFHSSTQDMIREFDLMEETYKKIFTRLGLDF 192

Query: 423 IMVKLSTRPEKRVGSDA------LWDDAENIM--------KGVLDTIKNSSQDRINTGVL 468
            +V   +     +G D       L D  E+ +           ++TI +  +D+I+    
Sbjct: 193 RVVAADSGA---IGGDGSKEFHVLADSGEDTLIVCQSCNYGANIETI-DEFKDKIDE--- 245

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGT-------IQVD--FNLPSRFN-AFYVNSHSEKC 518
           L E +     +E + +  I +   CG        I+V   F L ++++ A   N   E  
Sbjct: 246 LNEKS-----YEELKELKIDQKCSCGANLHFKKGIEVGHIFQLGTKYSAALEANFSDENG 300

Query: 519 HPVMIHRAVFG-SIERFIGIMIE-NFKGNLPLWLSPIQAIVTTITSSAVE------YAQE 570
                  A FG  + R +  +IE N   +  +W       +  I  S V+        ++
Sbjct: 301 RSKPFEMATFGIGVSRLVAAIIEQNHDESGCIWTKESAPYIVNIMVSNVKDEAQMSLGED 360

Query: 571 IANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           +   L++  + +  D   E   +K+++  +   P  +I G
Sbjct: 361 LYAKLRAAKVDVIFDDTKERFGFKMKDAELIGFPYTLIIG 400


>gi|169830802|ref|YP_001716784.1| prolyl-tRNA synthetase [Candidatus Desulforudis audaxviator MP104C]
 gi|226699139|sp|B1I2J1|SYP_DESAP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|169637646|gb|ACA59152.1| prolyl-tRNA synthetase [Candidatus Desulforudis audaxviator MP104C]
          Length = 566

 Score = 43.9 bits (102), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 39/156 (25%), Positives = 70/156 (44%), Gaps = 10/156 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+E   HR L   +    I +  SGV        ++ + ++  +R ++ +   +EI  P 
Sbjct: 17  EAEVVSHRLL---LKAGFIRKAASGVYTLLPLAHRVLRKIMRIIREEMDRQGGQEILLPI 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW +SG W  Y   +F +K      +  R F L P +      +    ++S+++L
Sbjct: 74  MQPAELWLRSGRWHVYGPELFRLK-----DRHGRDFCLGPTHEEIITELVMGDVRSHKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           P+ L +  + YR+E      GL+R R F   D + F
Sbjct: 129 PLLLYQIQNKYRDERRPRF-GLLRGREFIMKDLYSF 163


>gi|75675479|ref|YP_317900.1| alanyl-tRNA synthetase [Nitrobacter winogradskyi Nb-255]
 gi|123613615|sp|Q3ST43|SYA_NITWN RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|74420349|gb|ABA04548.1| alanyl-tRNA synthetase [Nitrobacter winogradskyi Nb-255]
          Length = 891

 Score = 43.9 bits (102), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 33/136 (24%), Positives = 61/136 (44%), Gaps = 8/136 (5%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEK 124
           D RS     HS  H++ EA++ +  +     G ++  +   +DF   +P S+DEL  IE 
Sbjct: 555 DRRSAIRANHSATHLLHEALRQVLGDHIAQRGSLVAPERLRFDFAHNKPISADELRCIED 614

Query: 125 KMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEW 179
              +++  +     + ++ + ARE     LF  +K   +V ++       +        W
Sbjct: 615 IANDVVLENGEVTTRLMAVDDAREAGARALF-GEKYGDEVRVVSMGGTDRHGAASNALGW 673

Query: 180 -FDLCRGPHVRSTGQV 194
             +LC G HV+ TG +
Sbjct: 674 SVELCGGTHVKRTGDI 689


>gi|300363019|ref|ZP_07059189.1| serine--tRNA ligase [Lactobacillus gasseri JV-V03]
 gi|300353069|gb|EFJ68947.1| serine--tRNA ligase [Lactobacillus gasseri JV-V03]
          Length = 436

 Score = 43.9 bits (102), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 41/196 (20%), Positives = 85/196 (43%), Gaps = 9/196 (4%)

Query: 242 EKRDHRKLAREMDLFH--IAEDGSGVIFWHRKG-WKIFQTLIS--YMRRKIKDDYEEINT 296
           E + H ++  E+++     A   SG  F + KG   + +  +S  ++    KD Y E+  
Sbjct: 136 EPKPHWEIGTELNILDWDTAAKVSGARFVYYKGAGALLERAVSNFFLDENTKDGYTEVIP 195

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +++    Q +G +  +  +++ +   DD  K  R   L P      V  F   +   +
Sbjct: 196 PYLVNDASMQGTGQFPKFTEDVYTIVDNDDPDKP-RDLTLIPTAEVPLVNYFRGKILDAK 254

Query: 357 ELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           +LP+ +  F   +R+E   +     GL+R+  F + +      ++  ++E  K+ +    
Sbjct: 255 QLPINVTAFSPAFRSEAGSAGRDTRGLIRMHEFRKVEMVKIVDEDSSWDELEKLTHNAEH 314

Query: 414 IYKDFGFEKIMVKLST 429
           + +  G    +V LST
Sbjct: 315 LLQKLGLPYHVVALST 330


>gi|225021160|ref|ZP_03710352.1| hypothetical protein CORMATOL_01172 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224946067|gb|EEG27276.1| hypothetical protein CORMATOL_01172 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 584

 Score = 43.9 bits (102), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 40/174 (22%), Positives = 74/174 (42%), Gaps = 18/174 (10%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R     +I     GV  W   G +  + +   +R ++     +E+  P 
Sbjct: 19  DAEVPSHKLLVRAG---YIRRAAPGVYTWLPLGLRTLRKIEKVVREEMDHIGAQELLFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L +  ++Q+  W  Y  N+F +K  D    D+       +  P H  +F   +K    S
Sbjct: 76  LLSREPYEQTRRWTEYGDNLFRLK--DRKGNDM-------LLGPTHEEMFARQVKDMFTS 126

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
           Y++ PV L +  + YR+E      G++R R F   D++ F   +    +    H
Sbjct: 127 YKDFPVTLYQIQTKYRDEER-PRAGILRGREFVMKDSYSFDMTDAGLEQSYLAH 179


>gi|320546404|ref|ZP_08040719.1| alanine--tRNA ligase [Streptococcus equinus ATCC 9812]
 gi|320448789|gb|EFW89517.1| alanine--tRNA ligase [Streptococcus equinus ATCC 9812]
          Length = 891

 Score = 43.9 bits (102), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 77/165 (46%), Gaps = 15/165 (9%)

Query: 57  GSIEIITPEDPRSLAVIR-HSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY-YDFDKEQPF 114
           G+   +  +  R  +VI+ H+  H++  A+ ++  E     G + E+GF  +DF   +  
Sbjct: 567 GTTYTLEIDSKRRHSVIKNHTATHLLHAALHNVIGEHATQAGSLNEEGFLRFDFTHFEAV 626

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
           ++DEL QIE+++ + I    P +      + A+ +            L      +NV + 
Sbjct: 627 TADELRQIEEEVNQQIWNAIPVITVETDIDTAKSM--------GAMALFGEKYGKNVRVV 678

Query: 175 RQGEW-FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLS 218
             G++  +LC G HV +T ++   FK++K  G    G   R +L+
Sbjct: 679 TIGDYSIELCGGTHVSNTAEI-GIFKIVKEEGI---GSGTRRILA 719


>gi|319902090|ref|YP_004161818.1| prolyl-tRNA synthetase [Bacteroides helcogenes P 36-108]
 gi|319417121|gb|ADV44232.1| prolyl-tRNA synthetase [Bacteroides helcogenes P 36-108]
          Length = 497

 Score = 43.9 bits (102), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 64/290 (22%), Positives = 122/290 (42%), Gaps = 56/290 (19%)

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECL 405
            + + + SYR+LP+   ++ +V+R E    L   +R   F   + H    T+E+   E +
Sbjct: 134 TYKNWINSYRDLPILCNQWANVFRWEMRTRL--FLRTAEFLWQEGHTAHATREEAEEEAV 191

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
           ++ N    +Y +F  EK M                   A  ++KGV      S+ +R   
Sbjct: 192 RMLN----VYGEFA-EKYM-------------------AVPVVKGV-----KSANERF-- 220

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIH 524
                 GA      E +++D  G+  Q GT   +  N    F+  +VN  ++  +   + 
Sbjct: 221 -----AGALNTYTIEAMMQD--GKALQSGTSHFLGQNFAKAFDVQFVNKENKMEY---VW 270

Query: 525 RAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTITSSAV------EYAQEIANL 574
              +G   R +G +I     +    LP  L+PIQ ++  I  +A       E    I   
Sbjct: 271 ATSWGVSTRLMGALIMTHSDDNGLVLPPHLAPIQVVIVPIYKNAEMLSKIDEKVAGIVAK 330

Query: 575 LKSHHLSIETD-FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRR 623
           LKS  +S++ D   N+   +K  ++ +K +P+ ++ G ++    ++ + R
Sbjct: 331 LKSMGISVKYDNADNKRPGFKFADYEVKGVPVRLVMGGRDLENSTMEVMR 380


>gi|170755913|ref|YP_001782179.1| alanyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
 gi|205830032|sp|B1IJG7|SYA_CLOBK RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|169121125|gb|ACA44961.1| alanyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
          Length = 879

 Score = 43.9 bits (102), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 37/149 (24%), Positives = 73/149 (48%), Gaps = 21/149 (14%)

Query: 65  EDPRSLAVIRHSCAHIM-AEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           E+ R+     H+  HI+ A  ++ +   VQ +   + ++   +DF   +  S DEL ++E
Sbjct: 556 EERRNNIRKNHTATHILHAALIKVVGDHVQQSGSYVDDERLRFDFSHFEAVSEDELKEVE 615

Query: 124 KKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGE 178
           K + + I + +    + ++ E+A+E     LF++K              K++V +   G 
Sbjct: 616 KIVNKEIMKANAVNTKVMNIEEAKEQGAIALFDNK-------------YKDDVRVVSVGN 662

Query: 179 WF-DLCRGPHVRSTGQVKKFFKLMKVAGA 206
           +  +LC G HV ++GQ+   FK++  AG 
Sbjct: 663 FSKELCGGTHVSNSGQI-GMFKIVSEAGV 690


>gi|170590129|ref|XP_001899825.1| Alanyl-tRNA synthetase [Brugia malayi]
 gi|158592744|gb|EDP31341.1| Alanyl-tRNA synthetase, putative [Brugia malayi]
          Length = 962

 Score = 43.9 bits (102), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 38/165 (23%), Positives = 77/165 (46%), Gaps = 20/165 (12%)

Query: 43  INGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIED 102
           + G++C     V +  I+ I  ED R+L +  H+  H++  A++ +  EV+     +  D
Sbjct: 578 VEGQLC-----VGDKVIQAID-EDRRNLIMKNHTGTHVLNFALRKVIGEVEQKGSLVAPD 631

Query: 103 GFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAY--KVE 160
              +D   +QP + +++  +EK+ Q +I  ++    + +   +AR++    + AY   V 
Sbjct: 632 RLRFDLTAKQPLTYEQIRMVEKESQMLIDTNATVFAKNVPLAEARQI-NGLRAAYPDPVR 690

Query: 161 ILE-SIPAKENVTLYRQGE-------WFDLCRGPHVRSTGQVKKF 197
           I+   IP +E   L R  +         + C G H+ + G + K 
Sbjct: 691 IVSVGIPIEE---LLRNKDSDLAVNTAVEFCGGTHLHNVGHIGKL 732


>gi|332185154|ref|ZP_08386903.1| alanyl-tRNA synthetase [Sphingomonas sp. S17]
 gi|332014878|gb|EGI56934.1| alanyl-tRNA synthetase [Sphingomonas sp. S17]
          Length = 882

 Score = 43.9 bits (102), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 43/190 (22%), Positives = 86/190 (45%), Gaps = 18/190 (9%)

Query: 22  TGSDVAES--ISRSLAKKAVAVAIN---GKVCDLSDPVREGSIEI-----ITPEDPRSLA 71
           +G  V +S  IS     KAV    +   G+V   +  ++EG I++     +  +  R  A
Sbjct: 501 SGGQVGDSGTISSDTGLKAVVTDTSKQLGRVFVHNAEIQEGGIKVGDSVKLAIDTTRRAA 560

Query: 72  V-IRHSCAHIMAEAV-QSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           +   HS  H++ EA+ Q +   V      +  +   +DF +    ++D++A++E K+ E 
Sbjct: 561 IRANHSATHLLHEALRQRLGTHVAQKGSLVAPERLRFDFSQPVGMTADDIAEVEAKVNEQ 620

Query: 130 IARDSPFLKQYLSHEKARELFESK--KEAYKVEILESIPAKENVTLYRQGEWFDLCRGPH 187
           +  + P + + ++ ++A E+       E Y  E+      ++    Y      +LC G H
Sbjct: 621 VRGNGPVVTRLMTPDEAIEMGAMALFGEKYGDEVRVVSMGEDADGTYS----LELCGGTH 676

Query: 188 VRSTGQVKKF 197
           V + G++  F
Sbjct: 677 VNALGEIGVF 686


>gi|227874914|ref|ZP_03993066.1| proline--tRNA ligase [Mobiluncus mulieris ATCC 35243]
 gi|269976484|ref|ZP_06183469.1| prolyl-tRNA synthetase [Mobiluncus mulieris 28-1]
 gi|306818238|ref|ZP_07451968.1| proline--tRNA ligase [Mobiluncus mulieris ATCC 35239]
 gi|307701739|ref|ZP_07638753.1| proline--tRNA ligase [Mobiluncus mulieris FB024-16]
 gi|227844491|gb|EEJ54648.1| proline--tRNA ligase [Mobiluncus mulieris ATCC 35243]
 gi|269935285|gb|EEZ91834.1| prolyl-tRNA synthetase [Mobiluncus mulieris 28-1]
 gi|304648977|gb|EFM46272.1| proline--tRNA ligase [Mobiluncus mulieris ATCC 35239]
 gi|307612997|gb|EFN92252.1| proline--tRNA ligase [Mobiluncus mulieris FB024-16]
          Length = 633

 Score = 43.9 bits (102), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 39/184 (21%), Positives = 79/184 (42%), Gaps = 11/184 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+E   H+ L R     +I     G+  W   G ++ + + + +R ++ +   +E+  P 
Sbjct: 19  EAEVDSHKLLVRAG---YIRRAAPGIYTWLPLGLRVLRNIENVVREEMDRIGGQELQFPV 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++ +  W+ + +++F  K  D    D   + L P +      +      SY++L
Sbjct: 76  LLPREPYEATNRWEEFGSSLF--KLQDRKGGD---YLLGPTHEEMFTVIVKDLFSSYKDL 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKD 417
           P+ L +    YR+E +    G++R R F   D + F  T E + +           +Y  
Sbjct: 131 PILLYQIKEKYRDE-ARPRAGVIRGREFVMKDLYSFDLTDEGLAHSYALNRGAYRRVYTR 189

Query: 418 FGFE 421
            G E
Sbjct: 190 LGLE 193


>gi|119630387|gb|EAX09982.1| mitochondrial ribosomal protein L39, isoform CRA_d [Homo sapiens]
          Length = 359

 Score = 43.9 bits (102), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 45/183 (24%), Positives = 83/183 (45%), Gaps = 24/183 (13%)

Query: 30  ISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIR---HSCAHIMAEAV 85
           +S    +K++   ++G+  D+  P+ +   I+ +T +D     V +    SCA +M   +
Sbjct: 101 LSEWYCRKSILALVDGQPWDMYKPLTKSCEIKFLTFKDCDPGEVNKAYWRSCAMMMGCVI 160

Query: 86  QSIWPE------VQVAIGPIIEDGFYYD------FDKEQPFSSDELAQIEKKMQEIIARD 133
           +  + +      V+    P+I   F YD       D+  P + + L    K    +I +D
Sbjct: 161 ERAFKDEYMVNLVRAPEVPVISGAFCYDVVLDSKLDEWMP-TKENLRSFTKDAHALIYKD 219

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN----VTLYRQGEWFDLCRGPHVR 189
            PF    +  + A E+F+  K  YKV+ +E   A +N    V L+R G++ D+  GP + 
Sbjct: 220 LPFETLEVEAKVALEIFQHSK--YKVDFIEE-KASQNPERIVKLHRIGDFIDVSEGPLIP 276

Query: 190 STG 192
            T 
Sbjct: 277 RTS 279


>gi|329667903|gb|AEB93851.1| seryl-tRNA synthetase [Lactobacillus johnsonii DPC 6026]
          Length = 436

 Score = 43.9 bits (102), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 42/196 (21%), Positives = 84/196 (42%), Gaps = 9/196 (4%)

Query: 242 EKRDHRKLAREMDLFH--IAEDGSGVIFWHRKG-WKIFQTLIS--YMRRKIKDDYEEINT 296
           E + H ++  E+++     A   SG  F + KG   + +  +S  ++    KD Y E+  
Sbjct: 136 EPKPHWEIGTELNILDWDTAAKVSGARFVYYKGAGALLERAVSNFFLDENTKDGYTEVIP 195

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +++    Q +G +  +  +++ +   DD  K  R   L P      V  F   +    
Sbjct: 196 PYLVNDASMQGTGQFPKFTEDVYTIVDNDDPDKP-RDLTLIPTAEVPLVNYFRGKILDGE 254

Query: 357 ELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           +LP+ +  F   +R+E   +     GL+R+  F + +      +E  ++E  K+ +    
Sbjct: 255 QLPINVTAFSPAFRSEAGSAGRDTRGLIRMHEFRKVEMVKIVDEESSWDELEKLTHNAEH 314

Query: 414 IYKDFGFEKIMVKLST 429
           + +  G    +V LST
Sbjct: 315 LLQKLGLPYHVVALST 330


>gi|221632736|ref|YP_002521957.1| alanyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
 gi|221155742|gb|ACM04869.1| alanyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
          Length = 878

 Score = 43.9 bits (102), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 69/158 (43%), Gaps = 26/158 (16%)

Query: 54  VREGSIEI------ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYY 106
           VREGSI +      I   + R+     H+  H++  A++ +  E  V  G ++  D   +
Sbjct: 534 VREGSIRVGQSVRAIVDAERRAAIRRNHTATHLLHAALRRVLGEHAVQAGSLVAPDRLRF 593

Query: 107 DFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLS-----HEKARELFESK-KEAYKVE 160
           DF   +  S ++L +IE+ + E I RD     +YL       E A  LF  K  +  +V 
Sbjct: 594 DFSHHESVSPEQLRRIEEMVNEQIVRDLRVEVRYLPLRDALAEGAIALFGEKYGDTVRVV 653

Query: 161 ILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFF 198
            ++   +KE            LC G HV  TG++  F 
Sbjct: 654 SIDGF-SKE------------LCGGTHVSHTGEIGAFL 678


>gi|150021633|ref|YP_001306987.1| phosphoribulokinase/uridine kinase [Thermosipho melanesiensis
           BI429]
 gi|149794154|gb|ABR31602.1| phosphoribulokinase/uridine kinase [Thermosipho melanesiensis
           BI429]
          Length = 559

 Score = 43.9 bits (102), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 39/169 (23%), Positives = 73/169 (43%), Gaps = 7/169 (4%)

Query: 44  NGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIED 102
           N  + +L  P+   G +  +         + +     I+   ++ I+P   + +   I  
Sbjct: 45  NNNIVELFRPLSYSGKVVFLDVNSIDGFRIYQRGLLFILKYVLKKIYPNHFLKVSHSIGK 104

Query: 103 GFYYDF----DKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYK 158
             Y +     +  +  S +E+  ++ KM E+I ++  FLK      +A +LF+    + K
Sbjct: 105 SIYCELKDLNNNLKVLSDEEIENVKSKMFEVINKNERFLKMEFFKSEALKLFDKLGYSDK 164

Query: 159 VEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAY 207
           V +L+    K+ V +Y+  E FD   G    STG V K+F L K    +
Sbjct: 165 VNLLKY-RKKKTVKVYKLDEHFDYFYGYMPHSTG-VLKYFDLFKYEDGF 211


>gi|327190521|gb|EGE57615.1| alanyl-tRNA synthetase protein [Rhizobium etli CNPAF512]
          Length = 884

 Score = 43.9 bits (102), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 92/205 (44%), Gaps = 24/205 (11%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKM 126
           RS     HS  H++ EA++ +        G ++  +   +D    +P +++EL  +E+  
Sbjct: 555 RSRLRANHSATHLLHEALREVLGTHVAQKGSLVAPERLRFDVSHPKPMTAEELKIVEEMA 614

Query: 127 QEIIARDSPFLKQYLS-----HEKARELFESK--KEAYKVEILESIPAKENVTLYRQGEW 179
            EI+ +++P   + +S      E A  LF  K   E   V +   +   ++   Y     
Sbjct: 615 NEIVLQNAPVTTRLMSVDDAIAEGAMALFGEKYGDEVRVVSMGTGLHGAKSNKPYS---- 670

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVA-GAYWR------GDSNRPMLS----RIYGTAWNTQ 228
            +LC G HV +TGQ+     L + A GA  R      G+S R  L+    R+   A + +
Sbjct: 671 VELCGGTHVSATGQIGLVRILGESAVGAGVRRLEAVTGESAREYLAEQDDRVKTLAASLK 730

Query: 229 QELTQYLYFLEESEKRDHRKLAREM 253
            + ++ L  + E+   + RKL RE+
Sbjct: 731 VQPSEVLSRV-ETLIDERRKLEREL 754


>gi|52548690|gb|AAU82539.1| glycyl-tRNA synthetase [uncultured archaeon GZfos18C8]
          Length = 593

 Score = 43.9 bits (102), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 2/64 (3%)

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRE-LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
           R   L+P    G    F H  + YRE LP  + + G  YRNE S    G++R+R FTQ +
Sbjct: 165 RVGYLRPETAQGMFVDFEHLFRFYREKLPFGVTQIGKAYRNEIS-PRQGVIRLREFTQAE 223

Query: 391 AHVF 394
           A +F
Sbjct: 224 AEIF 227


>gi|238852918|ref|ZP_04643319.1| serine--tRNA ligase [Lactobacillus gasseri 202-4]
 gi|238834454|gb|EEQ26690.1| serine--tRNA ligase [Lactobacillus gasseri 202-4]
          Length = 436

 Score = 43.9 bits (102), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 41/196 (20%), Positives = 85/196 (43%), Gaps = 9/196 (4%)

Query: 242 EKRDHRKLAREMDLFH--IAEDGSGVIFWHRKG-WKIFQTLIS--YMRRKIKDDYEEINT 296
           E + H ++  E+++     A   SG  F + KG   + +  +S  ++    KD Y E+  
Sbjct: 136 EPKPHWEIGTELNILDWDTAAKVSGARFVYYKGAGALLERAVSNFFLDENTKDGYTEVIP 195

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +++    Q +G +  +  +++ +   DD  K  R   L P      V  F   +   +
Sbjct: 196 PYLVNDASMQGTGQFPKFTEDVYTIVDNDDPDKP-RDLTLIPTAEVPLVNYFRGKILDAK 254

Query: 357 ELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           +LP+ +  F   +R+E   +     GL+R+  F + +      ++  ++E  K+ +    
Sbjct: 255 QLPINVTAFSPAFRSEAGSAGRDTRGLIRMHEFRKVEMVKIVDEDSSWDELEKLTHNAEH 314

Query: 414 IYKDFGFEKIMVKLST 429
           + +  G    +V LST
Sbjct: 315 LLQKLGLPYHVVALST 330


>gi|229828473|ref|ZP_04454542.1| hypothetical protein GCWU000342_00535 [Shuttleworthia satelles DSM
           14600]
 gi|229793067|gb|EEP29181.1| hypothetical protein GCWU000342_00535 [Shuttleworthia satelles DSM
           14600]
          Length = 921

 Score = 43.9 bits (102), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 35/139 (25%), Positives = 66/139 (47%), Gaps = 20/139 (14%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSDELAQIEK 124
           D R+     HS  H++  A++ +  +     G  ++D    +DF      S++E+ ++E 
Sbjct: 599 DRRANIARNHSATHLLHRALREVLGDHVQQKGSYVDDKKLRFDFVHFSAMSTEEIRKVED 658

Query: 125 KMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            + E IA D P + + +S E A++     LF  +K   +V ++E             G++
Sbjct: 659 LVNERIAADIPVVTEIMSQEDAKKTGAMALF-GEKYGDEVRVVE------------MGDY 705

Query: 180 -FDLCRGPHVRSTGQVKKF 197
             +LC G HV  TG+++ F
Sbjct: 706 STELCGGTHVGRTGKIQAF 724


>gi|52549236|gb|AAU83085.1| glycyl-tRNA synthetase [uncultured archaeon GZfos26E7]
          Length = 593

 Score = 43.9 bits (102), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 2/64 (3%)

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRE-LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
           R   L+P    G    F H  + YRE LP  + + G  YRNE S    G++R+R FTQ +
Sbjct: 165 RVGYLRPETAQGMFVDFEHLFRFYREKLPFGVTQIGKAYRNEIS-PRQGVIRLREFTQAE 223

Query: 391 AHVF 394
           A +F
Sbjct: 224 AEIF 227


>gi|253752458|ref|YP_003025599.1| seryl-tRNA synthetase [Streptococcus suis SC84]
 gi|253754284|ref|YP_003027425.1| seryl-tRNA synthetase [Streptococcus suis P1/7]
 gi|56684577|gb|AAW21989.1| SerS [Streptococcus suis]
 gi|251816747|emb|CAZ52389.1| seryl-tRNA synthetase [Streptococcus suis SC84]
 gi|251820530|emb|CAR47285.1| seryl-tRNA synthetase [Streptococcus suis P1/7]
 gi|319758862|gb|ADV70804.1| hypothetical protein SSUJS14_1746 [Streptococcus suis JS14]
          Length = 424

 Score = 43.9 bits (102), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 44/213 (20%), Positives = 89/213 (41%), Gaps = 24/213 (11%)

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFH----IAEDGSGVIFWHRKGWKIFQTLI 280
           W T +E T         E + H  L  ++D+          G+  +F+   G ++ + L 
Sbjct: 127 WGTPREFT--------FEPKAHWDLGEDLDILDWERGAKVTGARFLFYKNLGARLERALY 178

Query: 281 SYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPM 339
           ++M  + I + Y+EI TP +++      +G +  ++ + F +    DT      F L P 
Sbjct: 179 NFMLDEHIAEGYQEIITPYMVNHDSMFGTGQYPKFKEDTFELA---DT-----NFVLIPT 230

Query: 340 NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCT 396
                   + + +   ++LP+        +R+E   +     GL+R+  F + +   F T
Sbjct: 231 AEVPLTNYYRNEILEEKDLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAT 290

Query: 397 KEQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
            EQ ++E  K+     +I +  G    ++ L T
Sbjct: 291 PEQSYDELEKMTANAENILQKLGLPYRVLALCT 323


>gi|296230065|ref|XP_002760549.1| PREDICTED: bifunctional aminoacyl-tRNA synthetase [Callithrix
            jacchus]
          Length = 1540

 Score = 43.9 bits (102), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 67/307 (21%), Positives = 116/307 (37%), Gaps = 55/307 (17%)

Query: 334  FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH- 392
             A++P +       +   ++S+R+LP+RL ++ +V R E        +R R F   + H 
Sbjct: 1144 IAIRPTSETVMYPAYAKWVQSHRDLPIRLNQWCNVVRWEFKHP-QPFLRTREFLWQEGHS 1202

Query: 393  VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
             F T E+   E L+I +L   IY++     ++    T  EK  G D             +
Sbjct: 1203 AFATIEEAAEEVLQILDLYAQIYEELLAIPVVKGRKTEKEKFAGGD---------YTTTV 1253

Query: 453  DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
            +   ++S   I  G     G  +   FE + +D                 P      Y N
Sbjct: 1254 EAFISASGRAIQGGTSHHLGQNFSKMFEIMFEDP--------------KTPGEKQFAYQN 1299

Query: 513  SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIV--TTITSSAVE 566
            S              +G   R IG+M      N+ L L P    +Q +V    IT++  E
Sbjct: 1300 S--------------WGLTTRTIGVMTMIHGDNMGLVLPPRVACVQVVVIPCGITNALSE 1345

Query: 567  YAQEIA--------NLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASE- 616
              +E            L S ++ +  D R N +  +K     +K +PI +  G ++    
Sbjct: 1346 EDKEALMAKCNDYRRRLLSVNIRVRADLRDNYSPGWKFNHWELKGVPIRLEVGPRDMKNC 1405

Query: 617  RSIGIRR 623
            + + +RR
Sbjct: 1406 QFVAVRR 1412


>gi|268320022|ref|YP_003293678.1| hypothetical protein FI9785_1556 [Lactobacillus johnsonii FI9785]
 gi|262398397|emb|CAX67411.1| serS [Lactobacillus johnsonii FI9785]
          Length = 436

 Score = 43.9 bits (102), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 42/196 (21%), Positives = 84/196 (42%), Gaps = 9/196 (4%)

Query: 242 EKRDHRKLAREMDLFH--IAEDGSGVIFWHRKG-WKIFQTLIS--YMRRKIKDDYEEINT 296
           E + H ++  E+++     A   SG  F + KG   + +  +S  ++    KD Y E+  
Sbjct: 136 EPKPHWEIGTELNILDWDTAAKVSGARFVYYKGAGALLERAVSNFFLDENTKDGYTEVIP 195

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +++    Q +G +  +  +++ +   DD  K  R   L P      V  F   +    
Sbjct: 196 PYLVNDASMQGTGQFPKFTEDVYTIVDNDDPDKP-RDLTLIPTAEVPLVNYFRGKILDGE 254

Query: 357 ELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           +LP+ +  F   +R+E   +     GL+R+  F + +      +E  ++E  K+ +    
Sbjct: 255 QLPINVTAFSPAFRSEAGSAGRDTRGLIRMHEFRKVEMVKIVDEESSWDELEKLTHNAEH 314

Query: 414 IYKDFGFEKIMVKLST 429
           + +  G    +V LST
Sbjct: 315 LLQKLGLPYHVVALST 330


>gi|42519649|ref|NP_965579.1| seryl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
 gi|227889410|ref|ZP_04007215.1| seryl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
 gi|67461827|sp|Q74HZ5|SYS_LACJO RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|41583938|gb|AAS09545.1| seryl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
 gi|227850042|gb|EEJ60128.1| seryl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
          Length = 436

 Score = 43.9 bits (102), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 42/196 (21%), Positives = 84/196 (42%), Gaps = 9/196 (4%)

Query: 242 EKRDHRKLAREMDLFH--IAEDGSGVIFWHRKG-WKIFQTLIS--YMRRKIKDDYEEINT 296
           E + H ++  E+++     A   SG  F + KG   + +  +S  ++    KD Y E+  
Sbjct: 136 EPKPHWEIGTELNILDWDTAAKVSGARFVYYKGAGALLERAVSNFFLDENTKDGYTEVIP 195

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +++    Q +G +  +  +++ +   DD  K  R   L P      V  F   +    
Sbjct: 196 PYLVNDASMQGTGQFPKFTEDVYTIVDNDDPDKP-RDLTLIPTAEVPLVNYFRGKILDGE 254

Query: 357 ELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           +LP+ +  F   +R+E   +     GL+R+  F + +      +E  ++E  K+ +    
Sbjct: 255 QLPINVTAFSPAFRSEAGSAGRDTRGLIRMHEFRKVEMVKIVDEESSWDELEKLTHNAEH 314

Query: 414 IYKDFGFEKIMVKLST 429
           + +  G    +V LST
Sbjct: 315 LLQKLGLPYHVVALST 330


>gi|223934048|ref|ZP_03626000.1| seryl-tRNA synthetase [Streptococcus suis 89/1591]
 gi|223897275|gb|EEF63684.1| seryl-tRNA synthetase [Streptococcus suis 89/1591]
          Length = 424

 Score = 43.9 bits (102), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 44/213 (20%), Positives = 88/213 (41%), Gaps = 24/213 (11%)

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFH----IAEDGSGVIFWHRKGWKIFQTLI 280
           W T +E T         E + H  L  ++D+          G+  +F+   G ++ + L 
Sbjct: 127 WGTPREFT--------FEPKAHWDLGEDLDILDWERGAKVTGARFLFYKNLGARLERALY 178

Query: 281 SYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPM 339
           ++M    I + Y+EI TP +++      +G +  ++ + F +    DT      F L P 
Sbjct: 179 NFMLDEHIAEGYQEIITPYMVNHDSMFGTGQYPKFKEDTFELA---DT-----NFVLIPT 230

Query: 340 NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCT 396
                   + + +   ++LP+        +R+E   +     GL+R+  F + +   F T
Sbjct: 231 AEVPLTNYYRNEILEEKDLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAT 290

Query: 397 KEQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
            EQ ++E  K+     +I +  G    ++ L T
Sbjct: 291 PEQSYDELEKMTANAENILQKLGLPYRVLALCT 323


>gi|116630183|ref|YP_815355.1| seryl-tRNA synthetase [Lactobacillus gasseri ATCC 33323]
 gi|311110225|ref|ZP_07711622.1| serine--tRNA ligase [Lactobacillus gasseri MV-22]
 gi|122272880|sp|Q041F5|SYS_LACGA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|116095765|gb|ABJ60917.1| seryl-tRNA synthetase [Lactobacillus gasseri ATCC 33323]
 gi|311065379|gb|EFQ45719.1| serine--tRNA ligase [Lactobacillus gasseri MV-22]
          Length = 436

 Score = 43.9 bits (102), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 41/196 (20%), Positives = 85/196 (43%), Gaps = 9/196 (4%)

Query: 242 EKRDHRKLAREMDLFH--IAEDGSGVIFWHRKG-WKIFQTLIS--YMRRKIKDDYEEINT 296
           E + H ++  E+++     A   SG  F + KG   + +  +S  ++    KD Y E+  
Sbjct: 136 EPKPHWEIGTELNILDWDTAAKVSGARFVYYKGAGALLERAVSNFFLDENTKDGYTEVIP 195

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +++    Q +G +  +  +++ +   DD  K  R   L P      V  F   +   +
Sbjct: 196 PYLVNDASMQGTGQFPKFTEDVYTIVDNDDPDKP-RDLTLIPTAEVPLVNYFRGKILDAK 254

Query: 357 ELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           +LP+ +  F   +R+E   +     GL+R+  F + +      ++  ++E  K+ +    
Sbjct: 255 QLPINVTAFSPAFRSEAGSAGRDTRGLIRMHEFRKVEMVKIVDEDSSWDELEKLTHNAEH 314

Query: 414 IYKDFGFEKIMVKLST 429
           + +  G    +V LST
Sbjct: 315 LLQKLGLPYHVVALST 330


>gi|325297765|ref|YP_004257682.1| Prolyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
 gi|324317318|gb|ADY35209.1| Prolyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
          Length = 496

 Score = 43.9 bits (102), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 61/290 (21%), Positives = 119/290 (41%), Gaps = 54/290 (18%)

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           + + + + SYR+LP+   ++ +V R E    L   +R   F   + H   T      E  
Sbjct: 133 STYKNWINSYRDLPILCNQWANVVRWEMRTRL--FLRTAEFLWQEGH---TAHATREEAE 187

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
                ++ +Y DF  EK M                   A  ++KGV      S+ +R   
Sbjct: 188 AEAQKMLHVYGDFA-EKYM-------------------AVPVIKGV-----KSANERF-- 220

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIH 524
                 GA      E +++D  G+  QCGT   +  N    FN  +V+ +++  +   + 
Sbjct: 221 -----AGALDTYTIEGLMQD--GKALQCGTSHFLGQNFAKAFNVQFVDKNNKLDY---VW 270

Query: 525 RAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTITSSAVEY------AQEIANL 574
              +G   R +G +I     +    LP  L+PIQ ++  I  +  +        + I N 
Sbjct: 271 ATSWGVSTRLMGALIMTHSDDNGLVLPPHLAPIQVVIVPIYKNDEQLKLIDAKVEGIVNK 330

Query: 575 LKSHHLSIETD-FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRR 623
           L++  ++++ D   N+   +K  ++ +K +P+ +  G ++    +I + R
Sbjct: 331 LRAMGVTVKYDNADNKRPGFKFADYELKGVPVRLAMGGRDLENNTIELMR 380


>gi|154174082|ref|YP_001408546.1| alanyl-tRNA synthetase [Campylobacter curvus 525.92]
 gi|205830012|sp|A7GZA4|SYA_CAMC5 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|112803074|gb|EAU00418.1| alanyl-tRNA synthetase [Campylobacter curvus 525.92]
          Length = 852

 Score = 43.9 bits (102), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 38/163 (23%), Positives = 71/163 (43%), Gaps = 18/163 (11%)

Query: 42  AINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE 101
            +N    ++   ++ G +  +   D R+     HS  H++  A++ I        G  +E
Sbjct: 521 GLNLSQVEVGKQIKTGDVLNLKVSDARAEIARHHSATHLLHAALRKILGTHVAQAGSNVE 580

Query: 102 -DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESKKE 155
            D   +DF   +  +S+EL  IEK + + +A  +    + +  E A+      LF  +K 
Sbjct: 581 ADRLRFDFSHPKALTSEELEMIEKFVNDAVASSAAAKTEIMDIEAAKNSGAIALF-GEKY 639

Query: 156 AYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFF 198
           A  V +L    +  NV+        +LC G HV++  ++  FF
Sbjct: 640 AENVRVL----SLGNVSK-------ELCGGTHVKNVSEIGAFF 671


>gi|83858393|ref|ZP_00951915.1| prolyl-tRNA synthetase [Oceanicaulis alexandrii HTCC2633]
 gi|83853216|gb|EAP91068.1| prolyl-tRNA synthetase [Oceanicaulis alexandrii HTCC2633]
          Length = 442

 Score = 43.9 bits (102), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 41/179 (22%), Positives = 77/179 (43%), Gaps = 14/179 (7%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I ++ +G+  W   G ++ + +   +R  + +    E+  P +    LW++SG +D Y  
Sbjct: 32  IRQEAAGIYAWLPLGLRVLRKIEKIVREEQDRAGAIELLMPTLQPADLWRESGRYDDYGK 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  ++  D   +DL      P N      +F    +SY++LP  L      +R+E    
Sbjct: 92  EM--LRIVDRHERDL---LYGPTNEEMITEIFRGYCRSYKDLPKILYHIQWKFRDEIRPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD----FGFEKIMVKLSTRP 431
             G+MR R F   DA+ F      +   +K +N +   Y +     G + + ++  T P
Sbjct: 147 F-GVMRGREFLMKDAYSFDLD---YEGAVKAYNKMFVAYLNTFARMGLKSVPMRADTGP 201


>gi|312876823|ref|ZP_07736801.1| AAA ATPase [Caldicellulosiruptor lactoaceticus 6A]
 gi|311796442|gb|EFR12793.1| AAA ATPase [Caldicellulosiruptor lactoaceticus 6A]
          Length = 554

 Score = 43.9 bits (102), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 37/160 (23%), Positives = 79/160 (49%), Gaps = 4/160 (2%)

Query: 39  VAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIG 97
           VA  ++ ++ +L   + R+  ++ I       + + R S   ++  A + ++ E  V + 
Sbjct: 43  VAAKVDNEIKELKYVISRDCKVKFIDMTQEDGMRIYRRSLIFVLIVATRMLFKEA-VNVQ 101

Query: 98  PIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAY 157
             +  G Y + +  +  + +++  I++KM+ I+ +D  F ++ +S ++A  LFE K    
Sbjct: 102 HSLSKGLYCEVENRK-LTVEDIELIKQKMKWIVEQDFQFRREKVSKDEAVRLFEEKGFYD 160

Query: 158 KVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
           K   ++     E+V +Y  G++ D   G  V STG +K F
Sbjct: 161 KARTIK-FSENEHVYIYYCGDYVDYFYGHLVPSTGYLKIF 199


>gi|291513841|emb|CBK63051.1| alanyl-tRNA synthetase [Alistipes shahii WAL 8301]
          Length = 873

 Score = 43.9 bits (102), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 34/141 (24%), Positives = 63/141 (44%), Gaps = 10/141 (7%)

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           + PE  R  A   H+  H+M EA++ +    V+     +  +   +DF   Q  + +EL 
Sbjct: 551 VDPEK-RQAAANNHTATHLMHEALRKVLGAHVEQKGSLVTPEILRFDFSHFQKVTPEELR 609

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           ++E+ +   I  + P ++        RE  + + E     +L      + V + R G   
Sbjct: 610 KVEQLVNRAIRANYPLVEN-------REATKEEAEKCGAMMLFGEKYGDKVRMVRFGSSV 662

Query: 181 DLCRGPHVRSTGQVKKFFKLM 201
           +LC G H  +TG +  FFK++
Sbjct: 663 ELCGGTHTGATGNI-GFFKIL 682


>gi|262341353|ref|YP_003284208.1| alanine-tRNA ligase [Blattabacterium sp. (Blattella germanica) str.
           Bge]
 gi|262272690|gb|ACY40598.1| alanine-tRNA ligase [Blattabacterium sp. (Blattella germanica) str.
           Bge]
          Length = 887

 Score = 43.9 bits (102), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 9/144 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFS 115
            S + I  ++ R      H+  H++  +++ I    +Q     + ED   +DF   Q  +
Sbjct: 552 SSFKAIVDKNRRLEIEKNHTSTHLLHFSLKKILGNHIQQKGSYVGEDYLRFDFSHYQKIT 611

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEA--YKVEILESIPAKENVTL 173
            +EL +IE  +QE+I  D       L  ++   L E++K    YK E  E+   K+ V +
Sbjct: 612 VEELYKIENLVQELIFSD-----LILEEKRFSSLQEAEKNISFYKSETFEN-KYKQEVRV 665

Query: 174 YRQGEWFDLCRGPHVRSTGQVKKF 197
              G+  +LC G HV+ TG ++ F
Sbjct: 666 ITFGKSSELCIGTHVKHTGLIQIF 689


>gi|296208047|ref|XP_002750943.1| PREDICTED: probable prolyl-tRNA synthetase, mitochondrial-like
           [Callithrix jacchus]
          Length = 475

 Score = 43.9 bits (102), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 70/357 (19%), Positives = 128/357 (35%), Gaps = 68/357 (19%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           +++N P +    LWQ +  WD     +  ++      +  + + L P +     A+    
Sbjct: 115 QKVNMPSLSPAELWQATNRWDLMGKELLRLR-----DRHGKEYCLGPTHEEAITALIASQ 169

Query: 352 LK-SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHN 409
            K SY++LP  L +    +R+EP     GL+R R F   D + F +  +   +    + +
Sbjct: 170 KKLSYKQLPFLLYQVTRKFRDEPRPRF-GLLRCREFYMKDMYTFDSSPEAAQQTYSLVCD 228

Query: 410 LIISIYKDFGFEKIMVKLST-----------RPEKRVGSDALWDDAENIMKGVLDTIKNS 458
              S++   G   + V+ +            +    +G D L           ++T+  S
Sbjct: 229 AYCSLFNRLGLRFVKVQANVGSIGGTMSHEFQLPMDIGEDWLAICPSCSFSANMETLDVS 288

Query: 459 SQD--------RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFY 510
             +            G+ +G   + G K+  I                       FNA +
Sbjct: 289 QMNCPACQGPLTKTKGIEVGHTFYLGTKYSSI-----------------------FNAQF 325

Query: 511 VNSHSEKCHPVMIHRAVFG-SIERFIGIMIENFKG----NLPLWLSPIQA-IVTTITSSA 564
            N + +   P +     +G  + R +   IE          P  L+P QA ++     S 
Sbjct: 326 TNVYGK---PSLAEMGCYGLGVTRILAAAIEVLSTEDCVRWPSLLAPYQACLIPPKKGSK 382

Query: 565 VEYAQEIANLLKSH--------HLSIETDFRNE-TINYKIREHSIKKIPIIIICGDK 612
            E A E+A  L  H        H  +  D R   TI  ++++ S    P +II G +
Sbjct: 383 EEAASELAGQLYDHITEAVPQLHGEVLLDDRTHLTIGNRLKDASKFGYPFVIIAGKR 439


>gi|255009422|ref|ZP_05281548.1| prolyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
 gi|313147182|ref|ZP_07809375.1| prolyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
 gi|313135949|gb|EFR53309.1| prolyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
          Length = 497

 Score = 43.9 bits (102), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 64/300 (21%), Positives = 128/300 (42%), Gaps = 56/300 (18%)

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECL 405
            + + ++SYR+LP+   ++ +V+R E    L   +R   F   + H    T+E+   E +
Sbjct: 134 TYKNWIQSYRDLPILCNQWANVFRWEMRTRL--FLRTAEFLWQEGHTAHATREEAEEEAI 191

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
           ++ N    +Y DF  EK M                   A  ++KGV      S+ +R   
Sbjct: 192 RMLN----VYADFA-EKYM-------------------AVPVVKGV-----KSANERF-- 220

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIH 524
                 GA      E +++D  G+  Q GT   +  N    F+  +VN  ++  +   + 
Sbjct: 221 -----AGALDTYTIEAMMQD--GKALQSGTSHFLGQNFAKAFDVQFVNKENKLEY---VW 270

Query: 525 RAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTITSSAVEYAQEIANL------ 574
              +G   R +G +I     +    LP  L+PIQ ++  I  +  +  Q  A +      
Sbjct: 271 ATSWGVSTRLMGALIMTHSDDNGLVLPPHLAPIQVVIVPIYKNDEQLKQIDAKVEGIVAK 330

Query: 575 LKSHHLSIETD-FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
           LK+  +S++ D   N+   +K  ++ +K +P+ ++ G ++    ++ + R  +   + V+
Sbjct: 331 LKALGISVKYDNADNKRPGFKFADYELKGVPVRLVMGGRDLENNTMEVMRRDTLEKETVT 390


>gi|218680942|ref|ZP_03528839.1| alanyl-tRNA synthetase [Rhizobium etli CIAT 894]
          Length = 556

 Score = 43.9 bits (102), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 61/135 (45%), Gaps = 12/135 (8%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKM 126
           RS     HS  H++ EA++ +        G ++  +   +D    +P S++EL  +E+  
Sbjct: 364 RSRLRANHSATHLLHEAMREVLGTHVAQKGSLVAPERLRFDVSHPKPMSAEELKVVEEMA 423

Query: 127 QEIIARDSPFLKQYLS-----HEKARELFESK--KEAYKVEILESIPAKENVTLYRQGEW 179
            EI+ +++P   + +S      E A  LF  K   E   V +   +   ++   Y     
Sbjct: 424 NEIVLQNAPVTTRLMSVDDAIAEGAMALFGEKYGDEVRVVSMGTGLHGAKSNKPYS---- 479

Query: 180 FDLCRGPHVRSTGQV 194
            +LC G HV +TGQ+
Sbjct: 480 VELCGGTHVSATGQI 494


>gi|114572703|ref|XP_001172380.1| PREDICTED: glutamyl-prolyl tRNA synthetase isoform 3 [Pan
            troglodytes]
 gi|114572705|ref|XP_001172392.1| PREDICTED: glutamyl-prolyl tRNA synthetase isoform 4 [Pan
            troglodytes]
 gi|114572707|ref|XP_001172403.1| PREDICTED: glutamyl-prolyl tRNA synthetase isoform 5 [Pan
            troglodytes]
          Length = 1440

 Score = 43.9 bits (102), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 67/307 (21%), Positives = 117/307 (38%), Gaps = 55/307 (17%)

Query: 334  FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH- 392
             A++P +       +   ++S+R+LP++L ++ +V R E        +R R F   + H 
Sbjct: 1044 IAIRPTSETVMYPAYAKWVQSHRDLPIKLNQWCNVVRWEFKHP-QPFLRTREFLWQEGHS 1102

Query: 393  VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
             F T E+   E L+I +L   +Y++     ++    T  EK  G D             +
Sbjct: 1103 AFATMEEAAEEVLQILDLYAQVYEELLAIPVVKGRKTEKEKFAGGD---------YTTTI 1153

Query: 453  DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
            +   ++S   I  G     G  +   FE + +D                +P      Y N
Sbjct: 1154 EAFISASGRAIQGGTSHHLGQNFSKMFEIVFEDP--------------KIPGEKQFAYQN 1199

Query: 513  SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTT------ITSSAVE 566
            S              +G   R IG+M      N+ L L P  A V        IT++  E
Sbjct: 1200 S--------------WGLTTRTIGVMTMVHGDNMGLVLPPRVACVQVVIIPCGITNALSE 1245

Query: 567  YAQE--IANL------LKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKE-ASE 616
              +E  IA        L   ++ +  D R N +  +K     +K +PI +  G ++  S 
Sbjct: 1246 EDKEALIAKCNDYRRRLLRVNIRVRADLRDNYSPGWKFNHWELKGVPIRLEVGPRDMKSC 1305

Query: 617  RSIGIRR 623
            + + +RR
Sbjct: 1306 QFVAVRR 1312


>gi|219851699|ref|YP_002466131.1| glycyl-tRNA synthetase [Methanosphaerula palustris E1-9c]
 gi|219545958|gb|ACL16408.1| glycyl-tRNA synthetase [Methanosphaerula palustris E1-9c]
          Length = 573

 Score = 43.9 bits (102), Expect = 0.090,   Method: Compositional matrix adjust.
 Identities = 27/69 (39%), Positives = 36/69 (52%), Gaps = 2/69 (2%)

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRE-LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
           RT  L+P    G    F   L+ YR+ LP    + G  YRNE S    G++R+R FTQ +
Sbjct: 157 RTGYLRPETAQGIFTDFTRLLRFYRDKLPFGAVQIGKSYRNEIS-PRQGMIRLREFTQAE 215

Query: 391 AHVFCTKEQ 399
           A +F   EQ
Sbjct: 216 AEIFVHPEQ 224


>gi|312127607|ref|YP_003992481.1| alanyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
 gi|311777626|gb|ADQ07112.1| alanyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
          Length = 881

 Score = 43.9 bits (102), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 47/196 (23%), Positives = 86/196 (43%), Gaps = 32/196 (16%)

Query: 54  VREGSIEIITP------EDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYY 106
           V +G I +++       E+ R   +  H+  H++  A++ I  +  Q +   +  D   +
Sbjct: 537 VLKGEISVLSSVVAKVDEELRLATMKNHTATHLLHSALRKILGQHAQQSGSQVSPDRLRF 596

Query: 107 DFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEK-----ARELFESKKEAYKVEI 161
           DF   +P S +++ +IEK +  +I +  P  K     +      A  LF+ K        
Sbjct: 597 DFAHYEPLSEEQIIEIEKMVNNVIQQAIPVEKIVTDLDSALRMGATALFDEKYSNV---- 652

Query: 162 LESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKFFKLM---KVAGAYWRGDSNRPML 217
                    V + + G++  +LC G HV +TGQ+   FK++    VA    R ++     
Sbjct: 653 ---------VRVIKIGDFSMELCGGTHVDNTGQI-GMFKIISESSVAAGVRRIEAITG-- 700

Query: 218 SRIYGTAWNTQQELTQ 233
           +++Y    NTQQ L Q
Sbjct: 701 NKVYEFILNTQQTLKQ 716


>gi|295695750|ref|YP_003588988.1| alanyl-tRNA synthetase [Bacillus tusciae DSM 2912]
 gi|295411352|gb|ADG05844.1| alanyl-tRNA synthetase [Bacillus tusciae DSM 2912]
          Length = 878

 Score = 43.9 bits (102), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 33/133 (24%), Positives = 61/133 (45%), Gaps = 11/133 (8%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           H+  H++ +A++ +  E     G ++ D    +DF    P + +EL  +E+ + E I R+
Sbjct: 559 HTATHLLHKALREVLGEHVAQAGSLVADSRLRFDFSHYGPLAPEELEAVERVVNEEIWRN 618

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTG 192
            P           RE+   + +A     L      E V + + G++  +LC G HVR T 
Sbjct: 619 EPV--------DIREMPLDEAKAMGAMALFGEKYGERVRVVKAGDFSIELCGGCHVRRTS 670

Query: 193 QVKKFFKLMKVAG 205
           ++   FK++   G
Sbjct: 671 EI-GVFKIVSETG 682


>gi|227549046|ref|ZP_03979095.1| prolyl-tRNA synthetase [Corynebacterium lipophiloflavum DSM 44291]
 gi|227078900|gb|EEI16863.1| prolyl-tRNA synthetase [Corynebacterium lipophiloflavum DSM 44291]
          Length = 604

 Score = 43.9 bits (102), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 38/174 (21%), Positives = 77/174 (44%), Gaps = 18/174 (10%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R     ++     GV  W   G +  + + + +R ++      E+  P 
Sbjct: 30  DAEVPSHKLLVRA---GYVRRAAPGVYSWLPLGLRTLRKIETVVREEMDAMGALELLFPA 86

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS---- 354
           +L +  ++Q+  W  Y  ++F +K  D    D+       +  P H  +F   +KS    
Sbjct: 87  LLPREPYEQTNRWTEYGDDLFRLK--DRKGADM-------LLGPTHEEMFTVAVKSMFSS 137

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
           Y++ PV L +  + YR+E +    G++R R F   D++ F   ++   +  + H
Sbjct: 138 YKDFPVTLYQIQTKYRDE-ARPRAGILRGREFVMKDSYSFDMTDEGLEQSYQKH 190


>gi|206978343|ref|ZP_03239217.1| seryl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217957593|ref|YP_002336135.1| seryl-tRNA synthetase [Bacillus cereus AH187]
 gi|222093786|ref|YP_002527834.1| seryl-tRNA synthetase [Bacillus cereus Q1]
 gi|228983272|ref|ZP_04143487.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
 gi|229136860|ref|ZP_04265489.1| Seryl-tRNA synthetase [Bacillus cereus BDRD-ST26]
 gi|229153796|ref|ZP_04281928.1| Seryl-tRNA synthetase [Bacillus cereus ATCC 4342]
 gi|226701626|sp|B7HPS8|SYS_BACC7 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|254783006|sp|B9IYI0|SYS_BACCQ RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|206743435|gb|EDZ54868.1| seryl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217068054|gb|ACJ82304.1| seryl-tRNA synthetase [Bacillus cereus AH187]
 gi|221237832|gb|ACM10542.1| serine--tRNA ligase (seryl-tRNA synthetase) [Bacillus cereus Q1]
 gi|228629665|gb|EEK86360.1| Seryl-tRNA synthetase [Bacillus cereus ATCC 4342]
 gi|228646595|gb|EEL02800.1| Seryl-tRNA synthetase [Bacillus cereus BDRD-ST26]
 gi|228776452|gb|EEM24803.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
          Length = 424

 Score = 43.9 bits (102), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 35/153 (22%), Positives = 66/153 (43%), Gaps = 13/153 (8%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDD--YEEINTPQVLDQHLWQQSGHWDSYRANMF 319
           GS  +F+   G ++ + LIS+M     D+  YEE+  P ++++     +G    +  + F
Sbjct: 160 GSRFVFYKGAGARLERALISFMLDLHTDEHGYEEVLPPYMVNRASMTGTGQLPKFEEDAF 219

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS--- 376
            ++  D        + L P        +    + +  +LP+R A F S +R+E   +   
Sbjct: 220 RIESED--------YFLIPTAEVPVTNMHRDEILNKDQLPIRYAAFSSCFRSEAGSAGRD 271

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
             GL+R   F + +   F   E  + E  K+ N
Sbjct: 272 TRGLIRQHQFNKVELVKFVKPEDSYEELEKLTN 304


>gi|323467135|gb|ADX70822.1| Serine-tRNA ligase [Lactobacillus helveticus H10]
          Length = 502

 Score = 43.9 bits (102), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 32/151 (21%), Positives = 66/151 (43%), Gaps = 4/151 (2%)

Query: 282 YMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           ++    KDDY E+  P +++    Q +G +  +  +++ +   DD  K  R   L P   
Sbjct: 248 FLDENTKDDYTEVIPPYLVNDASMQGTGQFPKFHEDVYTIVDNDDPDKP-RDLTLIPTAE 306

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKE 398
              V  F + +    +LP+ +      +R+E   +     GL+R+  F + +    C  +
Sbjct: 307 VPLVNYFRNEIIHENKLPINVTALSPAFRSEAGSAGRDTRGLIRMHEFRKVEMVKVCKPD 366

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
           + ++E  K+ +    + +  G    +V LST
Sbjct: 367 ESWDELEKLTHNAEHLLQKLGLPYHVVALST 397


>gi|313203193|ref|YP_004041850.1| prolyL-tRNA synthetase [Paludibacter propionicigenes WB4]
 gi|312442509|gb|ADQ78865.1| prolyl-tRNA synthetase [Paludibacter propionicigenes WB4]
          Length = 490

 Score = 43.9 bits (102), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 61/296 (20%), Positives = 124/296 (41%), Gaps = 56/296 (18%)

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNL 410
           ++SYR+LP+ + ++ +V R E    L   +R   F   + H    T+ +   E  K    
Sbjct: 136 IQSYRDLPILINQWANVVRWEMRTRL--FLRTAEFLWQEGHTAHATEAEAVTEARK---- 189

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
           ++ +Y DF  E+ M                   A  ++KGV      S+ +R        
Sbjct: 190 MLEVYADFA-ERFM-------------------AVPVLKGV-----KSANERF------- 217

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG 529
            GA      E +++D  G+  Q GT   +  N    F+  +++  ++  +   +    +G
Sbjct: 218 AGALDTYCIEALMQD--GKALQAGTSHFLGQNFAKAFDVTFMDKSNKLDY---VWATSWG 272

Query: 530 SIERFIGIMIENFKGN----LPLWLSPIQAIVTTITSSAVEYA------QEIANLLKSHH 579
              R +G +I     +    LP  L+P Q ++  I  +  + A       E+   LK+  
Sbjct: 273 VSTRLMGALIMTHSDDNGLVLPPNLAPFQVVIVPIYKNEEQLAAIDAKVDEMIPKLKALG 332

Query: 580 LSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           +S++ D   N+   +K  E+ +K +P+ +  G ++    ++ + R  + T + V++
Sbjct: 333 ISVKYDNNDNKKPGWKFAEYELKGVPVRLALGARDLENGTVEVARRDTLTKETVAI 388


>gi|253756218|ref|YP_003029358.1| seryl-tRNA synthetase [Streptococcus suis BM407]
 gi|251818682|emb|CAZ56517.1| seryl-tRNA synthetase [Streptococcus suis BM407]
          Length = 424

 Score = 43.9 bits (102), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 44/213 (20%), Positives = 88/213 (41%), Gaps = 24/213 (11%)

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFH----IAEDGSGVIFWHRKGWKIFQTLI 280
           W T +E T         E + H  L  ++D+          G+  +F+   G ++ + L 
Sbjct: 127 WGTPREFT--------FEPKAHWDLGEDLDILDWERGAKVTGARFLFYKNLGARLERALY 178

Query: 281 SYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPM 339
           ++M    I + Y+EI TP +++      +G +  ++ + F +    DT      F L P 
Sbjct: 179 NFMLDEHIAEGYQEIITPYMVNHDSMFGTGQYPKFKEDTFELA---DT-----NFVLIPT 230

Query: 340 NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCT 396
                   + + +   ++LP+        +R+E   +     GL+R+  F + +   F T
Sbjct: 231 AEVPLTNYYRNEILEEKDLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAT 290

Query: 397 KEQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
            EQ ++E  K+     +I +  G    ++ L T
Sbjct: 291 PEQSYDELEKMTANAENILQKLGLPYRVLALCT 323


>gi|114572701|ref|XP_001172372.1| PREDICTED: hypothetical protein isoform 2 [Pan troglodytes]
          Length = 1434

 Score = 43.9 bits (102), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 67/307 (21%), Positives = 117/307 (38%), Gaps = 55/307 (17%)

Query: 334  FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH- 392
             A++P +       +   ++S+R+LP++L ++ +V R E        +R R F   + H 
Sbjct: 1038 IAIRPTSETVMYPAYAKWVQSHRDLPIKLNQWCNVVRWEFKHP-QPFLRTREFLWQEGHS 1096

Query: 393  VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
             F T E+   E L+I +L   +Y++     ++    T  EK  G D             +
Sbjct: 1097 AFATMEEAAEEVLQILDLYAQVYEELLAIPVVKGRKTEKEKFAGGD---------YTTTI 1147

Query: 453  DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
            +   ++S   I  G     G  +   FE + +D                +P      Y N
Sbjct: 1148 EAFISASGRAIQGGTSHHLGQNFSKMFEIVFEDP--------------KIPGEKQFAYQN 1193

Query: 513  SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTT------ITSSAVE 566
            S              +G   R IG+M      N+ L L P  A V        IT++  E
Sbjct: 1194 S--------------WGLTTRTIGVMTMVHGDNMGLVLPPRVACVQVVIIPCGITNALSE 1239

Query: 567  YAQE--IANL------LKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKE-ASE 616
              +E  IA        L   ++ +  D R N +  +K     +K +PI +  G ++  S 
Sbjct: 1240 EDKEALIAKCNDYRRRLLRVNIRVRADLRDNYSPGWKFNHWELKGVPIRLEVGPRDMKSC 1299

Query: 617  RSIGIRR 623
            + + +RR
Sbjct: 1300 QFVAVRR 1306


>gi|57530349|ref|NP_001006398.1| bifunctional aminoacyl-tRNA synthetase [Gallus gallus]
 gi|53133756|emb|CAG32207.1| hypothetical protein RCJMB04_20b9 [Gallus gallus]
          Length = 1601

 Score = 43.9 bits (102), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 65/318 (20%), Positives = 118/318 (37%), Gaps = 58/318 (18%)

Query: 334  FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH- 392
             A++P +       +   ++S+R+LP++L ++ +V R E        +R R F   + H 
Sbjct: 1205 IAIRPTSETVMYPAYAKWVQSHRDLPIKLNQWCNVVRWEFKHP-QPFLRTREFLWQEGHS 1263

Query: 393  VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
             F T E+   E ++I +L   +Y+D     ++    T  EK  G D             +
Sbjct: 1264 AFATYEEAAEEVMQILDLYAQVYEDLLAIPVVKGRKTEKEKFAGGD---------YTTTV 1314

Query: 453  DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
            +   ++S   I        G  +   FE + +D                 P      Y N
Sbjct: 1315 EAFISASGRAIQGATSHHLGQNFSKMFEVMFEDP--------------KKPGEKQYAYQN 1360

Query: 513  SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTI------------ 560
            S              +G   R IG+M      N+ L L P  A V  +            
Sbjct: 1361 S--------------WGITTRTIGVMTMIHGDNVGLVLPPRVACVQVVIIPCGITNTLSE 1406

Query: 561  --TSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKE-ASE 616
                + ++   E    L S ++ +  D R N +  +K     +K +PI +  G ++  S+
Sbjct: 1407 EDKEALLKKCNEYRKRLLSANVRVRADLRDNYSPGWKFNHWELKGVPIRLEVGPRDMKSQ 1466

Query: 617  RSIGIRRFGSTTTQKVSL 634
            + + +RR    T QK++ 
Sbjct: 1467 QFVAVRR---DTGQKLTF 1481


>gi|304436466|ref|ZP_07396440.1| phosphoribulokinase [Selenomonas sp. oral taxon 149 str. 67H29BP]
 gi|304370512|gb|EFM24163.1| phosphoribulokinase [Selenomonas sp. oral taxon 149 str. 67H29BP]
          Length = 540

 Score = 43.9 bits (102), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 42/190 (22%), Positives = 85/190 (44%), Gaps = 3/190 (1%)

Query: 22  TGSDVAESISRSLAKKAVAVAINGKVCDL-SDPVREGSIEIITPEDPRSLAVIRHSCAHI 80
           T   +A+   ++ +   VA  ING+V D+ S+   +  I  I         + + S   +
Sbjct: 4   TLMQLAQEEEQNYSSPIVAAKINGEVRDIQSEYDHDDEISFIELNTALGWRIYQRSILFL 63

Query: 81  MAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQIEKKMQEIIARDSPFLKQ 139
              AV ++  E +V     +  G Y +     Q  +   +  IE++M+ +IA + P LK 
Sbjct: 64  FIVAVSNMNKEAEVVAEFTVNKGLYCEVKIPGQSINPRLIQDIEQEMRGMIANNVPILKH 123

Query: 140 YLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFK 199
            +  ++A ELF+++    K  ++ S+P    +++Y    + D   G  +  T  + +F  
Sbjct: 124 GIPRQEAIELFQARGNRGKAALIASLP-HPMISIYTCCNYPDYLYGAMLPETKLLGQFAL 182

Query: 200 LMKVAGAYWR 209
            ++ +G   R
Sbjct: 183 DVEQSGVLIR 192


>gi|288803286|ref|ZP_06408720.1| tRNA ligase [Prevotella melaninogenica D18]
 gi|288334327|gb|EFC72768.1| tRNA ligase [Prevotella melaninogenica D18]
          Length = 887

 Score = 43.9 bits (102), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 35/137 (25%), Positives = 61/137 (44%), Gaps = 9/137 (6%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEK 124
           + R  +   H+  H++  A++ +  E     G  +  D   +D    Q  + +EL Q+EK
Sbjct: 568 EKRDASAANHTATHLLDYALKQVLGEHAEQKGSYVSPDTLRFDVSHFQKITDEELRQVEK 627

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
            + E+I +D P     +   +   + E+KK        E    K  V + R G   + C 
Sbjct: 628 LVNEMIRKDYP-----MDEHRDTPMEEAKKMGAVALFGEKYGDK--VRVVRFGPSCEFCG 680

Query: 185 GPHVRSTGQVKKFFKLM 201
           G H  STG++  FFK++
Sbjct: 681 GIHATSTGRI-GFFKIV 696


>gi|322806901|emb|CBZ04471.1| alanyl-tRNA synthetase [Clostridium botulinum H04402 065]
          Length = 879

 Score = 43.9 bits (102), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 36/149 (24%), Positives = 74/149 (49%), Gaps = 21/149 (14%)

Query: 65  EDPRSLAVIRHSCAHIM-AEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           E+ R+     H+  HI+ A  ++ +   VQ +   + ++   +DF   +  S DEL ++E
Sbjct: 556 EERRNNIRKNHTATHILHAALIEVVGDHVQQSGSYVDDERLRFDFSHFEAVSEDELKKVE 615

Query: 124 KKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGE 178
           K + + I + +    + ++ E+A++     LF++K              K++V +   G+
Sbjct: 616 KVVNKEIMKANAVNTKVMNIEEAKQQGAIALFDNK-------------YKDDVRVVSVGD 662

Query: 179 WF-DLCRGPHVRSTGQVKKFFKLMKVAGA 206
           +  +LC G HV ++GQ+   FK++  AG 
Sbjct: 663 FSKELCGGTHVSNSGQI-GMFKIVSEAGV 690


>gi|114572709|ref|XP_001172362.1| PREDICTED: glutamyl-prolyl tRNA synthetase isoform 1 [Pan
            troglodytes]
          Length = 1279

 Score = 43.9 bits (102), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 67/307 (21%), Positives = 117/307 (38%), Gaps = 55/307 (17%)

Query: 334  FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH- 392
             A++P +       +   ++S+R+LP++L ++ +V R E        +R R F   + H 
Sbjct: 883  IAIRPTSETVMYPAYAKWVQSHRDLPIKLNQWCNVVRWE-FKHPQPFLRTREFLWQEGHS 941

Query: 393  VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
             F T E+   E L+I +L   +Y++     ++    T  EK  G D             +
Sbjct: 942  AFATMEEAAEEVLQILDLYAQVYEELLAIPVVKGRKTEKEKFAGGD---------YTTTI 992

Query: 453  DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
            +   ++S   I  G     G  +   FE + +D                +P      Y N
Sbjct: 993  EAFISASGRAIQGGTSHHLGQNFSKMFEIVFEDP--------------KIPGEKQFAYQN 1038

Query: 513  SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTT------ITSSAVE 566
            S              +G   R IG+M      N+ L L P  A V        IT++  E
Sbjct: 1039 S--------------WGLTTRTIGVMTMVHGDNMGLVLPPRVACVQVVIIPCGITNALSE 1084

Query: 567  YAQE--IANL------LKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKE-ASE 616
              +E  IA        L   ++ +  D R N +  +K     +K +PI +  G ++  S 
Sbjct: 1085 EDKEALIAKCNDYRRRLLRVNIRVRADLRDNYSPGWKFNHWELKGVPIRLEVGPRDMKSC 1144

Query: 617  RSIGIRR 623
            + + +RR
Sbjct: 1145 QFVAVRR 1151


>gi|7020559|dbj|BAA91177.1| unnamed protein product [Homo sapiens]
          Length = 258

 Score = 43.9 bits (102), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 85/192 (44%), Gaps = 24/192 (12%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIR---HS 76
           +T    A  +S    +K++   ++G+  D+  P+ +   I+ +T +D     V      S
Sbjct: 6   STPYSCAMHLSEWYCRKSILALVDGQPWDMYKPLTKSCEIKFLTFKDCDPGEVNEAYWRS 65

Query: 77  CAHIMAEAVQSIWPE------VQVAIGPIIEDGFYYD------FDKEQPFSSDELAQIEK 124
           CA +M   ++  + +      V+    P+I   F YD       D+  P + + L    K
Sbjct: 66  CAMMMGCVIERAFKDEYMVNLVRAPEVPVISGAFCYDVVLDSKLDEWMP-TKENLRSFTK 124

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN----VTLYRQGEWF 180
               +I +D PF    +  + A E+F+  K  YKV+ +E   A +N    V L+R G++ 
Sbjct: 125 DAHALIYKDLPFETLEVEAKVALEIFQHSK--YKVDFIEE-KASQNPERIVKLHRIGDFI 181

Query: 181 DLCRGPHVRSTG 192
           D+  GP +  T 
Sbjct: 182 DVSEGPLIPRTS 193


>gi|312139298|ref|YP_004006634.1| prolyl-tRNA ligase pros [Rhodococcus equi 103S]
 gi|311888637|emb|CBH47949.1| prolyl-tRNA ligase ProS [Rhodococcus equi 103S]
          Length = 581

 Score = 43.5 bits (101), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 35/143 (24%), Positives = 62/143 (43%), Gaps = 22/143 (15%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           +EI  P +L +  ++ S  W  Y A +F +K  D    D+       M  P H  +F   
Sbjct: 69  QEILLPALLPRDPYETSNRWTEYGAGLFRLK--DRKGNDM-------MLGPTHEELFALT 119

Query: 352 LK----SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
           +K    SY++ PV L +  + YR+E      G++R R F   D++ F   ++      + 
Sbjct: 120 VKGEYNSYKDFPVTLYQVQTKYRDEER-PRAGILRGREFVMKDSYSFDLTDEGLTASYQA 178

Query: 408 HNLIISIYKDFGFEKIMVKLSTR 430
           H           +E+I+ +L  +
Sbjct: 179 HRDT--------YERILARLGVK 193


>gi|156743640|ref|YP_001433769.1| alanyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
 gi|205830195|sp|A7NQA5|SYA_ROSCS RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|156234968|gb|ABU59751.1| alanyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
          Length = 905

 Score = 43.5 bits (101), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 35/147 (23%), Positives = 69/147 (46%), Gaps = 17/147 (11%)

Query: 68  RSLAVIR-HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKK 125
           R  A++R H+  H++  A++ +  E     G ++  D   +DF   +P + ++L +IE++
Sbjct: 561 RRAAIMRSHTATHLLHRALRDVLGEHAAQAGSLVAPDRLRFDFTHTRPVTPEQLREIERR 620

Query: 126 MQEIIARDSPFLKQYLSHEKARE-----LFESK-KEAYKVEILESIPAKENVT----LYR 175
           +   I  D+P   Q L ++ A E     LF  K  +  ++  +  +   + ++      R
Sbjct: 621 VNAWIRADTPVAWQELPYQAALEAGAIALFGEKYGDVVRMVTIGCVNGNDALSPAAIAER 680

Query: 176 QGEWF-----DLCRGPHVRSTGQVKKF 197
           Q   F     +LC G HV  +G++  F
Sbjct: 681 QRAGFRMCSRELCGGTHVGRSGEIGLF 707


>gi|325673396|ref|ZP_08153087.1| proline--tRNA ligase [Rhodococcus equi ATCC 33707]
 gi|325555417|gb|EGD25088.1| proline--tRNA ligase [Rhodococcus equi ATCC 33707]
          Length = 581

 Score = 43.5 bits (101), Expect = 0.100,   Method: Compositional matrix adjust.
 Identities = 35/143 (24%), Positives = 62/143 (43%), Gaps = 22/143 (15%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           +EI  P +L +  ++ S  W  Y A +F +K  D    D+       M  P H  +F   
Sbjct: 69  QEILLPALLPRDPYETSNRWTEYGAGLFRLK--DRKGNDM-------MLGPTHEELFALT 119

Query: 352 LK----SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
           +K    SY++ PV L +  + YR+E      G++R R F   D++ F   ++      + 
Sbjct: 120 VKGEYNSYKDFPVTLYQVQTKYRDEER-PRAGILRGREFVMKDSYSFDLTDEGLTASYQA 178

Query: 408 HNLIISIYKDFGFEKIMVKLSTR 430
           H           +E+I+ +L  +
Sbjct: 179 HRDT--------YERILARLGVK 193


>gi|284931130|gb|ADC31068.1| alanyl-tRNA synthetase [Mycoplasma gallisepticum str. F]
          Length = 902

 Score = 43.5 bits (101), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 39/160 (24%), Positives = 74/160 (46%), Gaps = 20/160 (12%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSD 117
           +E++  E+ R L    HS  HI+   +++   E     G          DF+     + +
Sbjct: 551 VELMHDENWRKLVRKNHSLEHILHATLKNTINETIKQSGAFKSAAKATLDFNYPTKLTDE 610

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKAREL-----FESKKEAYKVEILESIPAKENVT 172
           +L +IE KM+++IA   P    ++ +E ++++     FE  +E  K E+L  I       
Sbjct: 611 DLDKIETKMRQVIADKIPVTVHHVDYETSQKMNAIAYFE--EEYKKHELLRVI------- 661

Query: 173 LYRQGEW-FDLCRGPHVRSTGQVKKFF--KLMKVAGAYWR 209
             + G++  +LC G HV +T ++++ F   L  +    WR
Sbjct: 662 --KIGDYSVELCGGTHVDNTKEIEECFITDLYSLGAGRWR 699


>gi|167762197|ref|ZP_02434324.1| hypothetical protein BACSTE_00549 [Bacteroides stercoris ATCC
           43183]
 gi|167699840|gb|EDS16419.1| hypothetical protein BACSTE_00549 [Bacteroides stercoris ATCC
           43183]
          Length = 497

 Score = 43.5 bits (101), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 63/289 (21%), Positives = 126/289 (43%), Gaps = 56/289 (19%)

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLK 406
           + + + SYR+LP+   ++ +V+R E    L   +R   F   + H    T+E+   E ++
Sbjct: 135 YKNWINSYRDLPILCNQWANVFRWEMRTRL--FLRTAEFLWQEGHTAHATREEAEEEAVR 192

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           + N    +Y +F  EK M                   A  ++KGV      S+ +R    
Sbjct: 193 MLN----VYSEFA-EKYM-------------------AVPVVKGV-----KSANERF--- 220

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
                GA      E +++D  G+  Q GT   +  N    F+  +VN  ++  +   +  
Sbjct: 221 ----AGALNTYTIEAMMQD--GKALQSGTSHFLGQNFAKAFDVQFVNKENKLEY---VWA 271

Query: 526 AVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTITSSAVEYA---QEIANL---L 575
             +G   R +G +I     +    LP  L+PIQ ++  I  +A   A   +++A +   L
Sbjct: 272 TSWGVSTRLMGALIMTHSDDNGLVLPPHLAPIQVVIVPIYKNAEMLAKIDEKVAGIVAKL 331

Query: 576 KSHHLSIETD-FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRR 623
           K+  +S++ D   N+   +K  ++ +K +P+ ++ G ++    ++ + R
Sbjct: 332 KAMGISVKYDNADNKRPGFKFADYEVKGVPVRLVMGGRDLENNTMEVMR 380


>gi|7271933|gb|AAF44696.1|AF239727_1 unknown [Homo sapiens]
          Length = 296

 Score = 43.5 bits (101), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 85/192 (44%), Gaps = 24/192 (12%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIR---HS 76
           +T    A  +S    +K++   ++G+  D+  P+ +   I+ +T +D     V      S
Sbjct: 44  STPYSCAMHLSEWYCRKSILALVDGQPWDMYKPLTKSCEIKFLTFKDCDPGEVNEAYWRS 103

Query: 77  CAHIMAEAVQSIWPE------VQVAIGPIIEDGFYYD------FDKEQPFSSDELAQIEK 124
           CA +M   ++  + +      V+    P+I   F YD       D+  P + + L    K
Sbjct: 104 CAMMMGCVIERAFKDEYMVNLVRAPEVPVISGAFCYDVVLDSKLDEWMP-TKENLRSFTK 162

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN----VTLYRQGEWF 180
               +I +D PF    +  + A E+F+  K  YKV+ +E   A +N    V L+R G++ 
Sbjct: 163 DAHALIYKDLPFETLEVEAKVALEIFQHSK--YKVDFIEE-KASQNPERIVKLHRIGDFI 219

Query: 181 DLCRGPHVRSTG 192
           D+  GP +  T 
Sbjct: 220 DVSEGPLIPRTS 231


>gi|121535965|ref|ZP_01667759.1| alanyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
 gi|121305457|gb|EAX46405.1| alanyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
          Length = 869

 Score = 43.5 bits (101), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 82/192 (42%), Gaps = 30/192 (15%)

Query: 23  GSDVAESISRSLAKKAVAVAINGKVCDLS----DPVREGSIE------IITPEDPRSLAV 72
           G  V +S + +     VAV    K+ D +      V EG+I+      I      R  A 
Sbjct: 494 GGQVGDSGTLTAQYGTVAVVTARKLPDGTIYHVGSVTEGTIKPGDMVKIAVDAARRRDAS 553

Query: 73  IRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIA 131
             H+  H++  A++ +  E V  A   +  D   +DF    P + ++LA++E  + E+I 
Sbjct: 554 RNHTATHLLHAALKKVLGEHVNQAGSYVGPDRLRFDFSHFAPVTVEQLAEVENMVNEVIL 613

Query: 132 RDSPFLKQYLSHEKARE-----LFESK-KEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           R+    +   + E ARE     LF  K  E   V I++   +KE            LC G
Sbjct: 614 RNIAVGRIETTQELAREMGATALFGEKYGERVSVVIIDDF-SKE------------LCGG 660

Query: 186 PHVRSTGQVKKF 197
            HV ST ++ +F
Sbjct: 661 THVSSTAEIGQF 672


>gi|302345784|ref|YP_003814137.1| alanine--tRNA ligase [Prevotella melaninogenica ATCC 25845]
 gi|302149231|gb|ADK95493.1| alanine--tRNA ligase [Prevotella melaninogenica ATCC 25845]
          Length = 887

 Score = 43.5 bits (101), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 35/137 (25%), Positives = 61/137 (44%), Gaps = 9/137 (6%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEK 124
           + R  +   H+  H++  A++ +  E     G  +  D   +D    Q  + +EL Q+EK
Sbjct: 568 EKRDASAANHTATHLLDYALKQVLGEHAEQKGSYVSPDTLRFDVSHFQKITDEELRQVEK 627

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
            + E+I +D P     +   +   + E+KK        E    K  V + R G   + C 
Sbjct: 628 LVNEMIRKDYP-----MDEHRDTPMEEAKKMGAVALFGEKYGDK--VRVVRFGPSCEFCG 680

Query: 185 GPHVRSTGQVKKFFKLM 201
           G H  STG++  FFK++
Sbjct: 681 GIHATSTGRI-GFFKIV 696


>gi|288924681|ref|ZP_06418618.1| tRNA ligase [Prevotella buccae D17]
 gi|315607688|ref|ZP_07882682.1| alanine--tRNA ligase [Prevotella buccae ATCC 33574]
 gi|288338468|gb|EFC76817.1| tRNA ligase [Prevotella buccae D17]
 gi|315250624|gb|EFU30619.1| alanine--tRNA ligase [Prevotella buccae ATCC 33574]
          Length = 881

 Score = 43.5 bits (101), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 35/137 (25%), Positives = 64/137 (46%), Gaps = 9/137 (6%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D R  +   H+  H++  A++ +  + V+     +  D   +DF   Q  + +EL Q+E+
Sbjct: 562 DKRDGSAANHTATHLLDYALKQVLGDHVEQKGSYVSADTLRFDFSHFQKVTDEELRQVER 621

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
            + ++I +D P     L   +   L E+K  A     L      + V + R G   + C 
Sbjct: 622 IVNDMIRQDFP-----LDEHRDTPLEEAK--ALGAIALFGEKYGDKVRVVRFGPSCEFCG 674

Query: 185 GPHVRSTGQVKKFFKLM 201
           G H +STG++  FFK++
Sbjct: 675 GIHAKSTGRI-GFFKII 690


>gi|189499811|ref|YP_001959281.1| prolyl-tRNA synthetase [Chlorobium phaeobacteroides BS1]
 gi|259511582|sp|B3EP23|SYP_CHLPB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|189495252|gb|ACE03800.1| prolyl-tRNA synthetase [Chlorobium phaeobacteroides BS1]
          Length = 481

 Score = 43.5 bits (101), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 62/302 (20%), Positives = 116/302 (38%), Gaps = 54/302 (17%)

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNEC 404
           A +   ++SYR+LP+ + ++ +V R E    L   +R   F   + H    T E+  +E 
Sbjct: 116 ASYKKWIQSYRDLPLLINQWANVVRWEMRTRL--FLRTSEFLWQEGHTAHATPEEAQDEV 173

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
           L++ N+  +  +++    +++   T  EK  G+D  W             I+   QD+  
Sbjct: 174 LRMINVYKTFAEEYMAMPVLIGRKTDSEKFAGADETW------------CIEAMMQDK-- 219

Query: 465 TGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF-NAFYVNSHSEKCHPVMI 523
                                   +  Q GT     NL   F  AF     S+      +
Sbjct: 220 ------------------------KALQAGT---SHNLGQNFAKAFDCQFQSKNGTLEYV 252

Query: 524 HRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLL 575
               +G   R IG +I     +    LP  L+  Q ++  I      +  E A  +A+ L
Sbjct: 253 WATSWGVSTRLIGALIMAHSDDRGLVLPPKLASRQVVIVPILRGDKQAVAEKAHALADEL 312

Query: 576 KSHHL-SIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
            S+ + +   D    +  +K  E+ ++ IP+ +  G ++ S       R  +   Q+++L
Sbjct: 313 NSNGIHAFVDDSEQNSPGWKFAEYELQGIPVRLEIGPRDISSNICIAARRDTGEKQQIAL 372

Query: 635 LD 636
            D
Sbjct: 373 DD 374


>gi|312128326|ref|YP_003993200.1| aaa atpase [Caldicellulosiruptor hydrothermalis 108]
 gi|311778345|gb|ADQ07831.1| AAA ATPase [Caldicellulosiruptor hydrothermalis 108]
          Length = 554

 Score = 43.5 bits (101), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 69/138 (50%), Gaps = 9/138 (6%)

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +T ED   + + R S   ++  A + ++ E  V +   +  G Y + +  +  SS ++  
Sbjct: 69  MTQED--GMRIYRRSLIFVLIVATRMLFKEA-VNVQHSLSKGLYCEVENRK-LSSQDIEL 124

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN--VTLYRQGEW 179
           I++KM+ I+ +D  F ++ +S E A +LFE K    K     +I   EN  V +Y  G++
Sbjct: 125 IKQKMKWIVEQDFQFRREKVSKEDAVKLFEEKGFYDKA---RTIKFSENDYVYIYYCGDY 181

Query: 180 FDLCRGPHVRSTGQVKKF 197
            D   G  V STG +K F
Sbjct: 182 VDYFYGHLVPSTGYLKIF 199


>gi|254372737|ref|ZP_04988226.1| hypothetical protein FTCG_00305 [Francisella tularensis subsp.
           novicida GA99-3549]
 gi|151570464|gb|EDN36118.1| hypothetical protein FTCG_00305 [Francisella novicida GA99-3549]
          Length = 865

 Score = 43.5 bits (101), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 35/143 (24%), Positives = 63/143 (44%), Gaps = 11/143 (7%)

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFSSDELAQIE 123
           + PR      HS  H++ +A++ +  +     G ++ E+   +DF  ++  S  E+ QIE
Sbjct: 544 DQPRLATAANHSATHLLHKALKLVLGDHAEQKGSLVDENRLRFDFTHDKAISRSEIEQIE 603

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDL 182
             + + I  + P      S +KA+ L          E L      + V +   G++  +L
Sbjct: 604 LLVNQQIRANYPVTTIETSQQKAKSL--------GAEALFGEKYGDIVRVISMGDFSIEL 655

Query: 183 CRGPHVRSTGQVKKFFKLMKVAG 205
           C G HV  TG +   FK++   G
Sbjct: 656 CGGTHVAYTGDI-GLFKIISEGG 677


>gi|313471498|sp|B9FSH5|SYAP_ORYSJ RecName: Full=Probable alanyl-tRNA synthetase, chloroplastic;
           AltName: Full=Alanine--tRNA ligase; Short=AlaRS
 gi|222635304|gb|EEE65436.1| hypothetical protein OsJ_20798 [Oryza sativa Japonica Group]
          Length = 932

 Score = 43.5 bits (101), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 40/181 (22%), Positives = 81/181 (44%), Gaps = 30/181 (16%)

Query: 35  AKKAVAVAIN------GKVCDLSDPVREGSIEIITPEDPRSLAVIR------HSCAHIMA 82
           AK+   + IN      G +      +++GS+E+    D    A +R      H+  H++ 
Sbjct: 561 AKQKAVIEINDVQKSLGNIFVHKGTIKQGSVEVGKEIDAAVDAKLRQGAKAHHTATHLLQ 620

Query: 83  EAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYL 141
            A++SI        G ++  D   +DF+  +P S +EL +IE  + + ++  +    + +
Sbjct: 621 SALKSIIGSETSQAGSLVAFDRLRFDFNFHRPLSEEELMKIESLVNQWVSSATHLETKVM 680

Query: 142 SHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKK 196
             + A+      +F  +K   +V ++E +P          G   +LC G HV +T +++ 
Sbjct: 681 DLQDAKNAGAIAMF-GEKYGEQVRVVE-VP----------GVSMELCGGTHVSNTAEIRG 728

Query: 197 F 197
           F
Sbjct: 729 F 729


>gi|317500249|ref|ZP_07958478.1| alanine-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|331087517|ref|ZP_08336451.1| alanyl-tRNA synthetase 1 [Lachnospiraceae bacterium 3_1_46FAA]
 gi|316898345|gb|EFV20387.1| alanine-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|330406269|gb|EGG85786.1| alanyl-tRNA synthetase 1 [Lachnospiraceae bacterium 3_1_46FAA]
          Length = 880

 Score = 43.5 bits (101), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 61/129 (47%), Gaps = 10/129 (7%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKM 126
           R+L+   HS  H++ +A++++    V+ A   + ED   +DF      + DE+ Q+EK +
Sbjct: 559 RALSARNHSATHLLQKALRTVLGSHVEQAGSSVNEDRLRFDFTHFSAMTEDEITQVEKLV 618

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRG 185
            E IA      K Y    K   + E+KK   +    E     + V +   G++  + C G
Sbjct: 619 NESIA------KAYDVDIKNMPIEEAKKTGAQALFGEKYG--DIVRVVNMGDYSIEFCGG 670

Query: 186 PHVRSTGQV 194
            HV +T ++
Sbjct: 671 THVNNTSEI 679


>gi|153814718|ref|ZP_01967386.1| hypothetical protein RUMTOR_00933 [Ruminococcus torques ATCC 27756]
 gi|145847749|gb|EDK24667.1| hypothetical protein RUMTOR_00933 [Ruminococcus torques ATCC 27756]
          Length = 880

 Score = 43.5 bits (101), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 61/129 (47%), Gaps = 10/129 (7%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKM 126
           R+L+   HS  H++ +A++++    V+ A   + ED   +DF      + DE+ Q+EK +
Sbjct: 559 RALSARNHSATHLLQKALRTVLGSHVEQAGSSVNEDRLRFDFTHFSAMTEDEITQVEKLV 618

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRG 185
            E IA      K Y    K   + E+KK   +    E     + V +   G++  + C G
Sbjct: 619 NESIA------KAYDVDIKNMPIEEAKKTGAQALFGEKYG--DIVRVVNMGDYSIEFCGG 670

Query: 186 PHVRSTGQV 194
            HV +T ++
Sbjct: 671 THVNNTSEI 679


>gi|15639654|ref|NP_219104.1| uridine kinase (udk) [Treponema pallidum subsp. pallidum str.
           Nichols]
 gi|3322964|gb|AAC65638.1| uridine kinase (udk) [Treponema pallidum subsp. pallidum str.
           Nichols]
          Length = 555

 Score = 43.5 bits (101), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 25/101 (24%), Positives = 54/101 (53%), Gaps = 13/101 (12%)

Query: 52  DPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE 111
           +PVRE ++           A+ R +   + A A  S++P V++  G  ++ G+ Y   + 
Sbjct: 63  EPVREDTV--------LGAALYRRTARLLFATAFHSVYPHVRLFAGYRVQGGYCY---RT 111

Query: 112 QPFSSDEL--AQIEKKMQEIIARDSPFLKQYLSHEKARELF 150
           +   +D+L  + + ++M+ ++A+D+P   QY++  +A  LF
Sbjct: 112 EGACADDLDVSLVVRRMKALVAQDAPIHMQYMTRREALNLF 152


>gi|311270165|ref|XP_003132793.1| PREDICTED: 39S ribosomal protein L39, mitochondrial-like [Sus
           scrofa]
          Length = 334

 Score = 43.5 bits (101), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 46/192 (23%), Positives = 87/192 (45%), Gaps = 24/192 (12%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIR---HS 76
           +T    A  +S    +K++   ++G+  D+  P+ +   I+ +T +D     V +    S
Sbjct: 83  STPYSCAMHLSEWYCRKSILALVDGQPWDMYKPLTKSCEIKFLTFKDDDPGEVNKAYWRS 142

Query: 77  CAHIMAEAVQSIWPE------VQVAIGPIIEDGFYYD------FDKEQPFSSDELAQIEK 124
           CA +M   ++  + +      V+    P+I   F YD       D+  P + + L    K
Sbjct: 143 CAMMMGCVIERAFKDEYVVSLVRAPEVPVIAGAFCYDVVLDKRLDEWMP-TKENLHSFTK 201

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN----VTLYRQGEWF 180
             + +I +D PF    +  + A E+F+  K  YK++ +E   A +N    V L+R G++ 
Sbjct: 202 DARALIYKDLPFETLEVEAKVALEIFQHNK--YKLDFIEE-KASQNPERIVKLHRFGDFI 258

Query: 181 DLCRGPHVRSTG 192
           D+  GP +  T 
Sbjct: 259 DVSEGPLIPRTS 270


>gi|62078861|ref|NP_001014086.1| probable prolyl-tRNA synthetase, mitochondrial precursor [Rattus
           norvegicus]
 gi|73919763|sp|Q5M7W7|SYPM_RAT RecName: Full=Probable prolyl-tRNA synthetase, mitochondrial;
           AltName: Full=Proline--tRNA ligase; Short=ProRS; Flags:
           Precursor
 gi|56789529|gb|AAH88403.1| Prolyl-tRNA synthetase 2, mitochondrial (putative) [Rattus
           norvegicus]
 gi|149035787|gb|EDL90468.1| rCG50302 [Rattus norvegicus]
          Length = 475

 Score = 43.5 bits (101), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 76/359 (21%), Positives = 135/359 (37%), Gaps = 63/359 (17%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           ++IN P +    LW+ +G WD     +  +K  D   K+   + L P +     A+    
Sbjct: 115 QKINMPSLSPAELWRATGRWDLMGRELLRLK--DRHGKE---YCLGPTHEEAVTALVASQ 169

Query: 352 LK-SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
            K SY++LP+ L +    +R+EP     GL+R R F   D + F +  +   E    ++L
Sbjct: 170 KKLSYKQLPLLLYQVTRKFRDEPRPRF-GLLRGREFYMKDMYTFDSSSEAAQE---TYSL 225

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG---V 467
           +   Y    F+++ ++              W  A   +  +  T+ +  Q  ++ G   +
Sbjct: 226 VCDAYCRL-FDRLGLR--------------WMKARADVGSIGGTMSHEFQLPVDIGEDRL 270

Query: 468 LLGEGAFYGPKFEYI-LKDAIGRDWQCG-----------TIQVDFNLPSRFNAFYVNSHS 515
           ++     +    E + L   I  D Q             T  +     S FNA + N+H 
Sbjct: 271 VVCPSCHFSANTEIVDLSQKICPDCQGPLTETKGIEVGHTFYLGTKYSSIFNAHFTNAHG 330

Query: 516 EKCHPVMIHRAVFG-SIERFIGIMIENFKG----NLPLWLSPIQ-AIVTTITSSAVEYAQ 569
           E    ++     +G  + R +   IE          P  L+P Q  I+     S    A 
Sbjct: 331 ES---LLAEMGCYGLGVTRILAAAIEVLSTEDCIRWPSLLAPYQVCIIPPKKGSKEAAAT 387

Query: 570 EIANLLKSHHLSIETDFRNE---------TINYKIREHSIKKIPIIIICGDKEASERSI 619
           EI   L           R E         TI  ++++ +    P +II     AS+R++
Sbjct: 388 EIVERLYDDVTEALPQLRGEVLLDDRTHLTIGNRLKDANKLGYPFVII-----ASKRAL 441


>gi|293336582|ref|NP_001168420.1| hypothetical protein LOC100382190 [Zea mays]
 gi|223948147|gb|ACN28157.1| unknown [Zea mays]
          Length = 349

 Score = 43.5 bits (101), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 35/156 (22%), Positives = 72/156 (46%), Gaps = 24/156 (15%)

Query: 54  VREGSIEIITPEDPRSLAVIR------HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYY 106
           +++GS+E+    D    A +R      H+  H++  A++S+        G ++  D   +
Sbjct: 2   IKQGSVEVGKEVDASVDAKLRQGAKAHHTATHLLQSALKSVVGSETSQAGSLVAFDHLRF 61

Query: 107 DFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEI 161
           DF+  +P S +EL  IE  + + I   +    + ++ + A+      +F  +K   +V +
Sbjct: 62  DFNFHRPLSEEELTTIEALINQWIGNAAHVETKVMALQDAKNAGAIAMF-GEKYGEQVRV 120

Query: 162 LESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
           +E +P          G   +LC G HV +T +++ F
Sbjct: 121 VE-VP----------GISLELCGGTHVSNTAEIRGF 145


>gi|320582734|gb|EFW96951.1| prolyl-tRNA synthetase, putative [Pichia angusta DL-1]
          Length = 536

 Score = 43.5 bits (101), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 38/170 (22%), Positives = 69/170 (40%), Gaps = 19/170 (11%)

Query: 253 MDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHW 311
           M   ++++  +G+  W   G    + +   +R+   K   +E++   +  Q LW ++G W
Sbjct: 31  MKAGYVSQPNAGLTHWLPLGLSTIRNIEEIIRKHHDKAGCQEVSLSVMSHQSLWDKTGRW 90

Query: 312 DSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRN 371
                        +D +  +  F L          +      SY++LPV   + G  YRN
Sbjct: 91  Q------------NDELFKVGDFCLAATAEEEMTQLVQRTADSYKKLPVIAYQIGRKYRN 138

Query: 372 E--PSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDF 418
           E  P G   GL+R R F   DA+ F   +        K++ +   I+K+ 
Sbjct: 139 EKRPRG---GLLRGREFVMKDAYSFDVDQSSALRSFEKMNQVYYDIFKEL 185


>gi|114572699|ref|XP_001172425.1| PREDICTED: bifunctional aminoacyl-tRNA synthetase isoform 7 [Pan
            troglodytes]
          Length = 1512

 Score = 43.5 bits (101), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 67/307 (21%), Positives = 117/307 (38%), Gaps = 55/307 (17%)

Query: 334  FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH- 392
             A++P +       +   ++S+R+LP++L ++ +V R E        +R R F   + H 
Sbjct: 1116 IAIRPTSETVMYPAYAKWVQSHRDLPIKLNQWCNVVRWEFKHP-QPFLRTREFLWQEGHS 1174

Query: 393  VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
             F T E+   E L+I +L   +Y++     ++    T  EK  G D             +
Sbjct: 1175 AFATMEEAAEEVLQILDLYAQVYEELLAIPVVKGRKTEKEKFAGGD---------YTTTI 1225

Query: 453  DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
            +   ++S   I  G     G  +   FE + +D                +P      Y N
Sbjct: 1226 EAFISASGRAIQGGTSHHLGQNFSKMFEIVFEDP--------------KIPGEKQFAYQN 1271

Query: 513  SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTT------ITSSAVE 566
            S              +G   R IG+M      N+ L L P  A V        IT++  E
Sbjct: 1272 S--------------WGLTTRTIGVMTMVHGDNMGLVLPPRVACVQVVIIPCGITNALSE 1317

Query: 567  YAQE--IANL------LKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKE-ASE 616
              +E  IA        L   ++ +  D R N +  +K     +K +PI +  G ++  S 
Sbjct: 1318 EDKEALIAKCNDYRRRLLRVNIRVRADLRDNYSPGWKFNHWELKGVPIRLEVGPRDMKSC 1377

Query: 617  RSIGIRR 623
            + + +RR
Sbjct: 1378 QFVAVRR 1384


>gi|86357937|ref|YP_469829.1| alanyl-tRNA synthetase [Rhizobium etli CFN 42]
 gi|86282039|gb|ABC91102.1| alanyl-tRNA synthetase protein [Rhizobium etli CFN 42]
          Length = 899

 Score = 43.5 bits (101), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 37/150 (24%), Positives = 66/150 (44%), Gaps = 13/150 (8%)

Query: 54  VREG-SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKE 111
           VR+G ++ +      RS     HS  H++ EA++ +        G ++  +   +D    
Sbjct: 555 VRDGDAVAMTVDHARRSRLRANHSATHLLHEALREVLGTHVAQKGSLVAPERLRFDVSHP 614

Query: 112 QPFSSDELAQIEKKMQEIIARDSPFLKQYLS-----HEKARELFESK--KEAYKVEILES 164
           +P + +EL  +E    EI+ ++SP   + +S      E A  LF  K   E   V +   
Sbjct: 615 KPMTPEELKIVEDMANEIVLQNSPVTTRLMSVDDAIAEGAMALFGEKYGDEVRVVSMGTG 674

Query: 165 IPAKENVTLYRQGEWFDLCRGPHVRSTGQV 194
           +   ++   Y      +LC G HV +TGQ+
Sbjct: 675 LHGAKSNKPYS----VELCGGTHVSATGQI 700


>gi|311105349|ref|YP_003978202.1| alanyl-tRNA synthetase [Achromobacter xylosoxidans A8]
 gi|310760038|gb|ADP15487.1| alanyl-tRNA synthetase [Achromobacter xylosoxidans A8]
          Length = 874

 Score = 43.5 bits (101), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 68/144 (47%), Gaps = 20/144 (13%)

Query: 68  RSLAVIRHSCAHIMAEAV-QSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKM 126
           R+  V  HS  H+M +A+ Q +   VQ     +  D   +DF ++ P +++++A++E  +
Sbjct: 555 RARTVRNHSATHLMHKALRQVLGAHVQQRGSLVDPDKTRFDFAQDAPLTAEQIARVEAIV 614

Query: 127 QEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
              I  + P + Q ++++ A +     LF  +K    V +L+   ++E            
Sbjct: 615 NAEILANQPTVAQVMAYDDAVKGGAMALF-GEKYGDTVRVLDIGFSRE------------ 661

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAG 205
           LC G HV  TG +   FK++   G
Sbjct: 662 LCGGTHVSRTGDI-GLFKIVSEGG 684


>gi|195399796|ref|XP_002058505.1| GJ14464 [Drosophila virilis]
 gi|194142065|gb|EDW58473.1| GJ14464 [Drosophila virilis]
          Length = 427

 Score = 43.5 bits (101), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 64/263 (24%), Positives = 111/263 (42%), Gaps = 29/263 (11%)

Query: 188 VRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQ-ELTQYLY-FLEESEKRD 245
           +R  GQ +   +    A      ++  P L      A++ Q  EL  Y +  L +   ++
Sbjct: 74  LRQGGQTQDVIRQQLAAELQQLPNATHPRL-----LAYDNQPLELANYKHRVLPQQGAKE 128

Query: 246 HRKLAREMDLFHIAEDG--SGVIFWHRKGW--KIFQTLISYMRRKI-KDDYEEINTPQVL 300
             +LAR + L+ +   G  +G   ++  G    + Q +I Y  R + +  ++ I+ P +L
Sbjct: 129 FSELARALSLYRMEHLGNYTGHKSYYLTGQLAMLEQAIIQYALRSLTRHGFKLISVPDIL 188

Query: 301 DQHLWQQSG-HWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            + + +  G   +  R  ++ +   D  +      AL      G  A  N  L  + ELP
Sbjct: 189 PREIIESCGMRTEGERTQVYKLD-TDQCLSGTSEMALA-----GFFA--NRQLMEW-ELP 239

Query: 360 VRLAEFGSVYRNEPSGSLH---GLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           V++A     YR E SG LH   G+ RV  FT+ +     T EQ      +  N+ I ++K
Sbjct: 240 VKVAAVSRCYRAETSG-LHEEKGIYRVHQFTKVEMFAIATPEQSEPMLEEFKNIEIDLFK 298

Query: 417 DFGFEKIMVKLSTRPEKRVGSDA 439
             G   I  +L   P   +G+ A
Sbjct: 299 QLG---INFRLLDMPPCELGAPA 318


>gi|332284668|ref|YP_004416579.1| alanyl-tRNA synthetase [Pusillimonas sp. T7-7]
 gi|330428621|gb|AEC19955.1| alanyl-tRNA synthetase [Pusillimonas sp. T7-7]
          Length = 873

 Score = 43.5 bits (101), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 35/144 (24%), Positives = 67/144 (46%), Gaps = 20/144 (13%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKM 126
           R+  V  HS  H+M +A++ +        G +++ D   +DF  + P ++D++AQ+E+ +
Sbjct: 554 RARTVRNHSATHLMHKALRQVLGSHVQQRGSLVDPDKTRFDFAHDAPMTADQIAQVERIV 613

Query: 127 QEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
              +  +     Q +S++ A +     LF  +K    V +L+   ++E            
Sbjct: 614 NAEVLNNHATQAQLMSYDDAVQGGAMALF-GEKYGDTVRVLDIGFSRE------------ 660

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAG 205
           LC G HV  TG +   FK++   G
Sbjct: 661 LCGGTHVARTGDI-GLFKIVSEGG 683


>gi|304389734|ref|ZP_07371693.1| proline--tRNA ligase [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
 gi|304326910|gb|EFL94149.1| proline--tRNA ligase [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
          Length = 623

 Score = 43.5 bits (101), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 39/174 (22%), Positives = 74/174 (42%), Gaps = 18/174 (10%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+E   H+ L R     +I     G+  W   G K  + + + +R ++ +   +E+  P 
Sbjct: 19  EAEVDSHKLLVRA---GYIRRAAPGIYTWLPLGLKTLRRVENIVREEMDRIGGQELQFPM 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L    +  +  W+ +  ++F +K  D    D        +  P H  +F   +K    S
Sbjct: 76  LLSSEPYVATNRWEEFGPSLFKLK--DRKEGDY-------LLAPTHEEMFTLAVKDMYTS 126

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
           Y++LPV L +    YR+E +    G++R R F   D++ F   +        +H
Sbjct: 127 YKDLPVILYQMKEKYRDE-ARPRAGIIRGREFVMKDSYSFDLTDDGLEHSYALH 179


>gi|298346548|ref|YP_003719235.1| proline--tRNA ligase [Mobiluncus curtisii ATCC 43063]
 gi|298236609|gb|ADI67741.1| proline--tRNA ligase [Mobiluncus curtisii ATCC 43063]
          Length = 623

 Score = 43.5 bits (101), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 39/174 (22%), Positives = 74/174 (42%), Gaps = 18/174 (10%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+E   H+ L R     +I     G+  W   G K  + + + +R ++ +   +E+  P 
Sbjct: 19  EAEVDSHKLLVRA---GYIRRAAPGIYTWLPLGLKTLRRVENIVREEMDRIGGQELQFPM 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L    +  +  W+ +  ++F +K  D    D        +  P H  +F   +K    S
Sbjct: 76  LLSSEPYVATNRWEEFGPSLFKLK--DRKEGDY-------LLAPTHEEMFTLAVKDMYTS 126

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
           Y++LPV L +    YR+E +    G++R R F   D++ F   +        +H
Sbjct: 127 YKDLPVILYQMKEKYRDE-ARPRAGIIRGREFVMKDSYSFDLTDDGLEHSYALH 179


>gi|195145494|ref|XP_002013727.1| GL23244 [Drosophila persimilis]
 gi|194102670|gb|EDW24713.1| GL23244 [Drosophila persimilis]
          Length = 418

 Score = 43.5 bits (101), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 52/231 (22%), Positives = 97/231 (41%), Gaps = 21/231 (9%)

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLFHIAEDG--SGVIFWHRKG--WKIFQTLISYMR 284
           +EL Q++      + ++  +LAR ++L+ +   G  +G   ++  G    + Q +I Y  
Sbjct: 103 RELAQHVQREMPLKPKEFSELARALNLYRMDHLGNYTGHKSYYLTGHLATLEQAIIQYAL 162

Query: 285 RKI-KDDYEEINTPQVLDQHLWQQSG-HWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
           + + K  +  I+ P +L + + +  G   +  R  ++ +   +  +      AL      
Sbjct: 163 QSVTKHGFRLISVPDILPKEVIESCGMRTEGERTQVYKLDTGE-CLSGTSEMAL------ 215

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG--SLHGLMRVRGFTQDDAHVFCTKEQM 400
                F + +    ELP+++      YR E SG     G+ RV  FT+ +    CT  Q 
Sbjct: 216 --AGFFANKVLPEEELPLKVTAVSRCYRAETSGLQEEKGIYRVHQFTKVEMFAICTPTQS 273

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWD-DAENIMKG 450
             E  +  N+ + ++K  G   I  +L   P   +GS A    D E  M G
Sbjct: 274 EAELEEFKNIEVDLFKQLG---INFRLLDMPPCELGSPAYQKYDIEAWMPG 321


>gi|209884575|ref|YP_002288432.1| alanyl-tRNA synthetase [Oligotropha carboxidovorans OM5]
 gi|209872771|gb|ACI92567.1| alanyl-tRNA synthetase [Oligotropha carboxidovorans OM5]
          Length = 909

 Score = 43.5 bits (101), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 31/126 (24%), Positives = 59/126 (46%), Gaps = 11/126 (8%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++ EA++ +  +     G ++  +   +DF   +P ++DEL +IE    +I+ ++
Sbjct: 586 HSATHLLHEALRQVLGDHIAQRGSLVSPERLRFDFAHTKPIAADELRRIEDIANDIVLQN 645

Query: 134 SPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           S    + +  + AR      LF  +K   +V ++       N      G   +LC G HV
Sbjct: 646 SEVTTRLMGLDDARSSGARALF-GEKYGDEVRVVSMGQTSGNAL----GWSVELCGGTHV 700

Query: 189 RSTGQV 194
           + TG +
Sbjct: 701 KRTGDI 706


>gi|114572697|ref|XP_001172414.1| PREDICTED: glutamyl-prolyl tRNA synthetase isoform 6 [Pan
            troglodytes]
          Length = 1519

 Score = 43.5 bits (101), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 67/307 (21%), Positives = 117/307 (38%), Gaps = 55/307 (17%)

Query: 334  FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH- 392
             A++P +       +   ++S+R+LP++L ++ +V R E        +R R F   + H 
Sbjct: 1123 IAIRPTSETVMYPAYAKWVQSHRDLPIKLNQWCNVVRWEFKHP-QPFLRTREFLWQEGHS 1181

Query: 393  VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
             F T E+   E L+I +L   +Y++     ++    T  EK  G D             +
Sbjct: 1182 AFATMEEAAEEVLQILDLYAQVYEELLAIPVVKGRKTEKEKFAGGD---------YTTTI 1232

Query: 453  DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
            +   ++S   I  G     G  +   FE + +D                +P      Y N
Sbjct: 1233 EAFISASGRAIQGGTSHHLGQNFSKMFEIVFEDP--------------KIPGEKQFAYQN 1278

Query: 513  SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTT------ITSSAVE 566
            S              +G   R IG+M      N+ L L P  A V        IT++  E
Sbjct: 1279 S--------------WGLTTRTIGVMTMVHGDNMGLVLPPRVACVQVVIIPCGITNALSE 1324

Query: 567  YAQE--IANL------LKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKE-ASE 616
              +E  IA        L   ++ +  D R N +  +K     +K +PI +  G ++  S 
Sbjct: 1325 EDKEALIAKCNDYRRRLLRVNIRVRADLRDNYSPGWKFNHWELKGVPIRLEVGPRDMKSC 1384

Query: 617  RSIGIRR 623
            + + +RR
Sbjct: 1385 QFVAVRR 1391


>gi|323142316|ref|ZP_08077148.1| phosphoribulokinase/uridine kinase family protein
           [Phascolarctobacterium sp. YIT 12067]
 gi|322413200|gb|EFY04087.1| phosphoribulokinase/uridine kinase family protein
           [Phascolarctobacterium sp. YIT 12067]
          Length = 553

 Score = 43.5 bits (101), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 26/129 (20%), Positives = 61/129 (47%), Gaps = 1/129 (0%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           +KL   +G I      +T   +A+ +S   A   V    NG+ CDL  P+  +G+++ + 
Sbjct: 2   LKLQLSNGQIIEVEEGSTLLPLAQRLSDKYASPIVMGLYNGEECDLQRPLTADGTVDFVE 61

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
             +   + V   +   ++  A + ++P+V + +   +    Y   + E+  +++++  IE
Sbjct: 62  VNNSVGMRVYVRTLLFMLIAATKKLYPDVHLEVRNSLGSALYCKDNSERKLTAEDIRSIE 121

Query: 124 KKMQEIIAR 132
           + M ++  R
Sbjct: 122 EYMHKMAER 130


>gi|315657037|ref|ZP_07909922.1| proline--tRNA ligase [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
 gi|315492429|gb|EFU82035.1| proline--tRNA ligase [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
          Length = 623

 Score = 43.5 bits (101), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 39/174 (22%), Positives = 74/174 (42%), Gaps = 18/174 (10%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+E   H+ L R     +I     G+  W   G K  + + + +R ++ +   +E+  P 
Sbjct: 19  EAEVDSHKLLVRA---GYIRRAAPGIYTWLPLGLKTLRRVENIVREEMDRIGGQELQFPM 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L    +  +  W+ +  ++F +K  D    D        +  P H  +F   +K    S
Sbjct: 76  LLSSEPYVATNRWEEFGPSLFKLK--DRKEGDY-------LLAPTHEEMFTLAVKDMYTS 126

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
           Y++LPV L +    YR+E +    G++R R F   D++ F   +        +H
Sbjct: 127 YKDLPVILYQMKEKYRDE-ARPRAGIIRGREFVMKDSYSFDLTDDGLEHSYALH 179


>gi|291297318|ref|YP_003508716.1| alanyl-tRNA synthetase [Meiothermus ruber DSM 1279]
 gi|290472277|gb|ADD29696.1| alanyl-tRNA synthetase [Meiothermus ruber DSM 1279]
          Length = 883

 Score = 43.5 bits (101), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 61/129 (47%), Gaps = 13/129 (10%)

Query: 75  HSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           H+  H++  A++++    VQ     +  D   +DF + +P +  +LA+IE  +   I  D
Sbjct: 574 HTATHLLHAALRAVLGSHVQQKGSYVGPDRLRFDFSQFEPIAPRDLARIELLVNRWIQAD 633

Query: 134 SPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
            P    Y   E+AR+     LF  +K    V ++    A +NVT        +LC G HV
Sbjct: 634 FPVSYTYKPLEEARKEGAMALF-GEKYGDVVRVVSVEGAIDNVTSK------ELCGGCHV 686

Query: 189 RSTGQVKKF 197
           R TG++  F
Sbjct: 687 RRTGEIGAF 695


>gi|226949919|ref|YP_002805010.1| alanine--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
 gi|226843074|gb|ACO85740.1| alanine--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
          Length = 879

 Score = 43.5 bits (101), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 36/149 (24%), Positives = 74/149 (49%), Gaps = 21/149 (14%)

Query: 65  EDPRSLAVIRHSCAHIM-AEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           E+ R+     H+  HI+ A  ++ +   VQ +   + ++   +DF   +  S DEL ++E
Sbjct: 556 EERRNNIRKNHTATHILHAALIKVVGDHVQQSGSYVDDERLRFDFSHFEAVSEDELKEVE 615

Query: 124 KKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGE 178
           K + + I + +    + ++ E+A++     LF++K              K++V +   G+
Sbjct: 616 KIVNKEIMKANAVNTKVMNIEEAKQQGAIALFDNK-------------YKDDVRVVSVGD 662

Query: 179 WF-DLCRGPHVRSTGQVKKFFKLMKVAGA 206
           +  +LC G HV ++GQ+   FK++  AG 
Sbjct: 663 FSKELCGGTHVSNSGQI-GMFKIVSEAGV 690


>gi|15673706|ref|NP_267880.1| alanyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
 gi|20532263|sp|Q9CEW0|SYA_LACLA RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|12724742|gb|AAK05822.1|AE006402_10 alanyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
 gi|326407190|gb|ADZ64261.1| alanyl-tRNA synthetase [Lactococcus lactis subsp. lactis CV56]
          Length = 872

 Score = 43.5 bits (101), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 39/156 (25%), Positives = 74/156 (47%), Gaps = 12/156 (7%)

Query: 53  PVREGSIEIITPEDPRSLAVIR-HSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY-YDFDK 110
           P++ G    +  +  R  AV++ H+  H++  A+ +I     +  G + E  F  +DF  
Sbjct: 543 PLKVGESYTLEIDKERRAAVVKNHTATHLLHAALHNIVGNHALQAGSLNEVEFLRFDFTH 602

Query: 111 EQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN 170
               + +ELA+IE+++ E+I        Q L  E       + KE   + +      K N
Sbjct: 603 FAQVTKEELAEIERQVNEVIW-------QSLKVETVETDIATAKEMGAMALFGEKYGK-N 654

Query: 171 VTLYRQGEW-FDLCRGPHVRSTGQVKKFFKLMKVAG 205
           V + + G++  +LC G H ++T ++   FK++K  G
Sbjct: 655 VRVVKIGDYSIELCGGTHTQTTSEI-GLFKIVKEEG 689


>gi|218132498|ref|ZP_03461302.1| hypothetical protein BACPEC_00357 [Bacteroides pectinophilus ATCC
           43243]
 gi|217992608|gb|EEC58610.1| hypothetical protein BACPEC_00357 [Bacteroides pectinophilus ATCC
           43243]
          Length = 868

 Score = 43.5 bits (101), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 39/155 (25%), Positives = 68/155 (43%), Gaps = 12/155 (7%)

Query: 54  VREGSIEIITPEDP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKE 111
           ++ G    +T + P R+     HS  H++ +A++ +        G  ++ D   +DF   
Sbjct: 533 IKTGDTVTLTVDAPARAATCANHSATHLLQKALRDVLGTHVEQKGSYVDPDRLRFDFAHF 592

Query: 112 QPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENV 171
           Q  + DE+A +E  + E IA   P +   +S E A      KK        E    K  V
Sbjct: 593 QAMTPDEIASVESIVNEKIAEALPVVTNIMSLEDA------KKTGAMALFGEKYGDK--V 644

Query: 172 TLYRQGEW-FDLCRGPHVRSTGQVKKFFKLMKVAG 205
            +   G++  +LC G HV +T  +   FK++  +G
Sbjct: 645 RVVSMGDFSTELCGGTHVANTSNI-MLFKIVSESG 678


>gi|40063567|gb|AAR38356.1| prolyl-tRNA synthetase [uncultured marine bacterium 582]
          Length = 445

 Score = 43.5 bits (101), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 37/171 (21%), Positives = 73/171 (42%), Gaps = 8/171 (4%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  +G+  W   G+K+ + +   +   + +  +  +  P +    LW++SG +D++  
Sbjct: 32  IKQSSAGIYSWLPMGFKVLKKIEDIVHEEQQRAGHMPMLMPTIQSADLWRESGRYDAFGD 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  +K   D     R     P        +F   + SY++LP+ L +    +R+E    
Sbjct: 92  EMLRIKDRHD-----RDMLFTPTAEELITDIFRAHVGSYKDLPLTLYQIQWKFRDEIRPR 146

Query: 377 LHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMVK 426
             G+MR R F   D + F  TKE   +   +     +  Y+  G + I ++
Sbjct: 147 F-GVMRGREFYMKDGYNFDLTKEAALHAYNRHLVSYLRTYERMGLQAIPMR 196


>gi|315655105|ref|ZP_07908007.1| proline--tRNA ligase [Mobiluncus curtisii ATCC 51333]
 gi|315490586|gb|EFU80209.1| proline--tRNA ligase [Mobiluncus curtisii ATCC 51333]
          Length = 623

 Score = 43.5 bits (101), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 39/174 (22%), Positives = 74/174 (42%), Gaps = 18/174 (10%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+E   H+ L R     +I     G+  W   G K  + + + +R ++ +   +E+  P 
Sbjct: 19  EAEVDSHKLLVRA---GYIRRAAPGIYTWLPLGLKTLRRVENIVREEMDRIGGQELQFPM 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L    +  +  W+ +  ++F +K  D    D        +  P H  +F   +K    S
Sbjct: 76  LLSSEPYVATNRWEEFGPSLFKLK--DRKEGDY-------LLAPTHEEMFTLAVKDMYTS 126

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
           Y++LPV L +    YR+E +    G++R R F   D++ F   +        +H
Sbjct: 127 YKDLPVILYQMKEKYRDE-ARPRAGIIRGREFVMKDSYSFDLTDDGLEHSYALH 179


>gi|303326376|ref|ZP_07356819.1| alanine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
 gi|302864292|gb|EFL87223.1| alanine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
          Length = 892

 Score = 43.5 bits (101), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 31/134 (23%), Positives = 56/134 (41%), Gaps = 3/134 (2%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQ-SIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D R      H+C H++  A++ ++   V+ A   +      +DF      + +ELA +E+
Sbjct: 570 DSRQSTARNHTCTHLLHAALRRTLGTHVKQAGSLVDSRRLRFDFSHIAALTPEELAAVER 629

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
            +   I  D P   + +  E+A  L       +  +  E++         R+ E  +LC 
Sbjct: 630 DVNRAIMADLPVAAREMPREEA--LAGGAMALFGEKYGETVRVLTVGCEGREPESMELCG 687

Query: 185 GPHVRSTGQVKKFF 198
           G H+  TGQ   F 
Sbjct: 688 GTHLSRTGQAGSFL 701


>gi|205830239|sp|Q2K7T4|SYA_RHIEC RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
          Length = 884

 Score = 43.5 bits (101), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 37/150 (24%), Positives = 66/150 (44%), Gaps = 13/150 (8%)

Query: 54  VREG-SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKE 111
           VR+G ++ +      RS     HS  H++ EA++ +        G ++  +   +D    
Sbjct: 540 VRDGDAVAMTVDHARRSRLRANHSATHLLHEALREVLGTHVAQKGSLVAPERLRFDVSHP 599

Query: 112 QPFSSDELAQIEKKMQEIIARDSPFLKQYLS-----HEKARELFESK--KEAYKVEILES 164
           +P + +EL  +E    EI+ ++SP   + +S      E A  LF  K   E   V +   
Sbjct: 600 KPMTPEELKIVEDMANEIVLQNSPVTTRLMSVDDAIAEGAMALFGEKYGDEVRVVSMGTG 659

Query: 165 IPAKENVTLYRQGEWFDLCRGPHVRSTGQV 194
           +   ++   Y      +LC G HV +TGQ+
Sbjct: 660 LHGAKSNKPYS----VELCGGTHVSATGQI 685


>gi|91774923|ref|YP_544679.1| alanyl-tRNA synthetase [Methylobacillus flagellatus KT]
 gi|122400203|sp|Q1H3U9|SYA_METFK RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|91708910|gb|ABE48838.1| alanyl-tRNA synthetase [Methylobacillus flagellatus KT]
          Length = 874

 Score = 43.5 bits (101), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 32/136 (23%), Positives = 66/136 (48%), Gaps = 18/136 (13%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H+M +A++++        G +++ D   +DF    P ++DE+ +IE  +   I  +
Sbjct: 563 HSATHLMHKALRAVLGSHVQQKGSLVDPDKTRFDFSHNAPVTADEIRRIEDIVNAEILAN 622

Query: 134 SPFLKQYLSHEKARE----LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
           +P L + +  ++A++    +   +K   +V +L+   ++E            LC G HV 
Sbjct: 623 TPTLARVMPIDEAQKTGAMMLFGEKYGDEVRVLDIGTSRE------------LCGGTHVS 670

Query: 190 STGQVKKFFKLMKVAG 205
            TG +   FK++  +G
Sbjct: 671 RTGDI-GLFKIVSESG 685


>gi|150391375|ref|YP_001321424.1| phosphoribulokinase/uridine kinase [Alkaliphilus metalliredigens
           QYMF]
 gi|149951237|gb|ABR49765.1| phosphoribulokinase/uridine kinase [Alkaliphilus metalliredigens
           QYMF]
          Length = 574

 Score = 43.5 bits (101), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 63/126 (50%), Gaps = 1/126 (0%)

Query: 72  VIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIA 131
           V + S + +       ++   +V++   +  G Y +   ++P   +++ +I+ +M +IIA
Sbjct: 94  VYQRSLSFVFIRVCMELFSGCKVSVEHSLSKGLYCELHYKRPLVEEDVKRIKNRMDDIIA 153

Query: 132 RDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRST 191
            D  F K  +  ++A+++F    +  KV++L+    K  + +Y+ G   +   G  V +T
Sbjct: 154 EDVRFEKSRIPIDEAKDIFREYGQMGKVKLLK-YREKPYINMYQCGWLKNYFYGYMVPTT 212

Query: 192 GQVKKF 197
           G +K F
Sbjct: 213 GYLKAF 218


>gi|291276861|ref|YP_003516633.1| alanyl-tRNA synthetase [Helicobacter mustelae 12198]
 gi|290964055|emb|CBG39895.1| alanyl-tRNA synthetase [Helicobacter mustelae 12198]
          Length = 850

 Score = 43.5 bits (101), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 35/150 (23%), Positives = 66/150 (44%), Gaps = 14/150 (9%)

Query: 53  PVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKE 111
           P++ G I  +  +  R      HS  H++   ++  +       G ++E +   +DF   
Sbjct: 535 PLKVGEIYEVLVDHSRQEIAKHHSATHLLHAILREKFGSQVAQAGSLVEANRLRFDFSFP 594

Query: 112 QPFSSDELAQIEKKMQEIIARDSPFLKQYL--SHEKARELFESKKEAYKVEILESIPAKE 169
           +P + +EL +I+  +  +IA++ P   +++     K R       E Y           E
Sbjct: 595 RPITKEELLEIQDSVNALIAKNLPARVEHMEIGQAKTRGAIALFGEKY----------GE 644

Query: 170 NVTLYRQG-EWFDLCRGPHVRSTGQVKKFF 198
           NV +   G E  +LC G HV++TG +  F+
Sbjct: 645 NVRVVSFGEESCELCGGIHVQNTGFIGNFY 674


>gi|289064339|gb|ADC80545.1| proline aminoacyl-tRNA synthetase [Toxoplasma gondii]
          Length = 783

 Score = 43.5 bits (101), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 60/322 (18%), Positives = 123/322 (38%), Gaps = 58/322 (18%)

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYR---NEPSGSLHGLMRVRGFTQDDA 391
           A++P +       +   ++S+R+LP++L ++ SV R    +P+      +R R F   + 
Sbjct: 437 AIRPTSETIMYPAYAKWIRSHRDLPLKLNQWCSVVRWEFKQPTP----FLRTREFLWQEG 492

Query: 392 HV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKG 450
           H    T+E+ +   L I    + +Y+ + +E+ +     + EK  G        E    G
Sbjct: 493 HTAHATEEEAWELVLDI----LELYRRW-YEECLAVPVIKGEKSEG--------EKFAGG 539

Query: 451 VLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFY 510
              T   +       G+        G  F  +                          F 
Sbjct: 540 KKTTTVEAFIPENGRGIQAATSHLLGTNFAKM--------------------------FE 573

Query: 511 VNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTTI------ 560
           +    E+ H  ++H+  +G   R +G+MI     +  L + P    +Q ++  I      
Sbjct: 574 IEFEDEEGHKRLVHQTSWGCTTRSLGVMIMTHGDDKGLVIPPRVASVQVVIIPILFKDEN 633

Query: 561 TSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSI 619
           T   +   +E+  +L+   + +  D R N T  +K     +K +P+ +  G K+ ++ + 
Sbjct: 634 TGEILGKCRELKTMLEKADIRVRIDDRSNYTPGWKYNHWEVKGVPLRLELGPKDLAKGTA 693

Query: 620 GIRRFGSTTTQKVSLLDAIPIL 641
            + R  +    ++S  D  P L
Sbjct: 694 RVVRRDTGEAYQISWADLAPKL 715


>gi|281492315|ref|YP_003354295.1| alanyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
 gi|281375979|gb|ADA65470.1| Alanyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
          Length = 872

 Score = 43.5 bits (101), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 39/156 (25%), Positives = 74/156 (47%), Gaps = 12/156 (7%)

Query: 53  PVREGSIEIITPEDPRSLAVIR-HSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY-YDFDK 110
           P++ G    +  +  R  AV++ H+  H++  A+ +I     +  G + E  F  +DF  
Sbjct: 543 PLKVGESYTLEIDKERRAAVVKNHTATHLLHAALHNIVGNHALQAGSLNEVEFLRFDFTH 602

Query: 111 EQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN 170
               + +ELA+IE+++ E+I        Q L  E       + KE   + +      K N
Sbjct: 603 FAQVTKEELAEIERQVNEVIW-------QSLKVETVETDIATAKEMGAMALFGEKYGK-N 654

Query: 171 VTLYRQGEW-FDLCRGPHVRSTGQVKKFFKLMKVAG 205
           V + + G++  +LC G H ++T ++   FK++K  G
Sbjct: 655 VRVVKIGDYSIELCGGTHTQTTSEI-GLFKIVKEEG 689


>gi|49474375|ref|YP_032417.1| alanyl-tRNA synthetase [Bartonella quintana str. Toulouse]
 gi|59798531|sp|Q6FZF1|SYA_BARQU RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|49239879|emb|CAF26277.1| Alanyl-tRNA synthetase [Bartonella quintana str. Toulouse]
          Length = 888

 Score = 43.5 bits (101), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 74/165 (44%), Gaps = 15/165 (9%)

Query: 75  HSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++ EA++ I  P V      ++ D   +DF   +  SS+EL +IE    +I+ ++
Sbjct: 564 HSATHLLHEALRQILGPHVTQKGSLVLPDRLRFDFSHPKSVSSEELKKIEDLANDIVLQN 623

Query: 134 SPFLKQYLS-----HEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPH 187
           S      ++      E A  LF  +K   +V ++      E   L ++  W  +LC G H
Sbjct: 624 SEVTTHLMALDDAISEGAMALF-GEKYGDEVRVVSMGNPLEPEGLKKR--WSIELCGGTH 680

Query: 188 VRSTGQVKKFFKLMK--VAGAYWRGDSNRPMLSRIYGTAWNTQQE 230
           V  TG +     + +  VA    R ++     +R+Y   +N Q E
Sbjct: 681 VERTGDIGLIHIVSESSVAAGVRRIEALTGTAARLY---FNRQDE 722


>gi|306836356|ref|ZP_07469334.1| proline--tRNA ligase [Corynebacterium accolens ATCC 49726]
 gi|304567716|gb|EFM43303.1| proline--tRNA ligase [Corynebacterium accolens ATCC 49726]
          Length = 594

 Score = 43.5 bits (101), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 38/174 (21%), Positives = 77/174 (44%), Gaps = 18/174 (10%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +  +A    G+  W   G +  + +   +R+++     +E+  P 
Sbjct: 24  DAEVPSHKLLVRAGYVRRVA---PGIYTWLPLGLRTLRKIEDVVRQEMDAIGGQEMLFPA 80

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L +  ++++  W  Y  N+F  +  D    DL       +  P H  +F + +K    S
Sbjct: 81  LLPREPYEKTNRWVEYGPNLF--RLQDRKNADL-------LLGPTHEEMFANAVKDMYSS 131

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
           Y++ PV L +  + YR+E      G++R R F   D++ F   ++  +     H
Sbjct: 132 YKDFPVTLYQIQTKYRDEER-PRAGVLRGREFVMKDSYSFDMNDEGLDSSYARH 184


>gi|168180547|ref|ZP_02615211.1| alanyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
 gi|182668624|gb|EDT80603.1| alanyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
          Length = 879

 Score = 43.5 bits (101), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 36/149 (24%), Positives = 74/149 (49%), Gaps = 21/149 (14%)

Query: 65  EDPRSLAVIRHSCAHIM-AEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           E+ R+     H+  HI+ A  ++ +   VQ +   + ++   +DF   +  S DEL ++E
Sbjct: 556 EERRNNIRKNHTATHILHAALIKVVGDHVQQSGSYVDDERLRFDFSHFEAVSEDELKEVE 615

Query: 124 KKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGE 178
           K + + I + +    + ++ E+A++     LF++K              K++V +   G+
Sbjct: 616 KIVNKEIMKANAVNTKVMNIEEAKQQGAIALFDNK-------------YKDDVRVVSVGD 662

Query: 179 WF-DLCRGPHVRSTGQVKKFFKLMKVAGA 206
           +  +LC G HV ++GQ+   FK++  AG 
Sbjct: 663 FSKELCGGTHVSNSGQI-GIFKIVSEAGV 690


>gi|148380519|ref|YP_001255060.1| alanyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
 gi|153932600|ref|YP_001384806.1| alanyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|153937856|ref|YP_001388276.1| alanyl-tRNA synthetase [Clostridium botulinum A str. Hall]
 gi|205830027|sp|A7FWJ5|SYA_CLOB1 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|205830031|sp|A5I4Z5|SYA_CLOBH RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|148290003|emb|CAL84122.1| putative alanyl-tRNA synthetase [Clostridium botulinum A str. ATCC
           3502]
 gi|152928644|gb|ABS34144.1| alanyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|152933770|gb|ABS39269.1| alanine--tRNA ligase [Clostridium botulinum A str. Hall]
          Length = 879

 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 36/149 (24%), Positives = 74/149 (49%), Gaps = 21/149 (14%)

Query: 65  EDPRSLAVIRHSCAHIM-AEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           E+ R+     H+  HI+ A  ++ +   VQ +   + ++   +DF   +  S DEL ++E
Sbjct: 556 EERRNNIRKNHTATHILHAALIKVVGDHVQQSGSYVDDERLRFDFSHFEAVSEDELKEVE 615

Query: 124 KKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGE 178
           K + + I + +    + ++ E+A++     LF++K              K++V +   G+
Sbjct: 616 KIVNKEIMKANAVNTKVMNIEEAKQQGAIALFDNK-------------YKDDVRVVSVGD 662

Query: 179 WF-DLCRGPHVRSTGQVKKFFKLMKVAGA 206
           +  +LC G HV ++GQ+   FK++  AG 
Sbjct: 663 FSKELCGGTHVSNSGQI-GIFKIVSEAGV 690


>gi|15965551|ref|NP_385904.1| alanyl-tRNA synthetase [Sinorhizobium meliloti 1021]
 gi|307302671|ref|ZP_07582427.1| alanyl-tRNA synthetase [Sinorhizobium meliloti BL225C]
 gi|307318519|ref|ZP_07597953.1| alanyl-tRNA synthetase [Sinorhizobium meliloti AK83]
 gi|7404473|sp|P27866|SYA_RHIME RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|15074732|emb|CAC46377.1| Alanyl-tRNA ligase [Sinorhizobium meliloti 1021]
 gi|306895859|gb|EFN26611.1| alanyl-tRNA synthetase [Sinorhizobium meliloti AK83]
 gi|306903035|gb|EFN33626.1| alanyl-tRNA synthetase [Sinorhizobium meliloti BL225C]
          Length = 887

 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 35/150 (23%), Positives = 70/150 (46%), Gaps = 13/150 (8%)

Query: 54  VREGSIEIITPEDPRSLAV-IRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKE 111
           V+ G    +T +  R   +   HS  H++ EA++ +        G ++  +   +D    
Sbjct: 542 VKTGEAAALTVDHARRARLRANHSATHLLHEALREVLGTHVAQKGSLVAPERLRFDVSHP 601

Query: 112 QPFSSDELAQIEKKMQEIIARDSPFLKQYLS-----HEKARELFESKKEAYKVEILESIP 166
           +P +++EL  +E+   EII +++P + + +S      E A  LF    E Y  E+   + 
Sbjct: 602 KPMTAEELKIVEEMANEIIVQNTPVVTRLMSVDDAIAEGAMALF---GEKYGDEV-RVVS 657

Query: 167 AKENVTLYRQGEWF--DLCRGPHVRSTGQV 194
             + +   + G+ +  +LC G HV +TG +
Sbjct: 658 MGQGLRGSKAGKPYSVELCGGTHVSATGDI 687


>gi|269140202|ref|YP_003296903.1| alanyl-tRNA synthetase [Edwardsiella tarda EIB202]
 gi|267985863|gb|ACY85692.1| alanyl-tRNA synthetase [Edwardsiella tarda EIB202]
 gi|304560033|gb|ADM42697.1| Alanyl-tRNA synthetase [Edwardsiella tarda FL6-60]
          Length = 875

 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 55/130 (42%), Gaps = 20/130 (15%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H+M  A++S+  E     G ++ DG   +DF   +     ++ Q+E  +   I R+
Sbjct: 564 HSATHLMHAALRSVLGEHVAQKGSLVSDGALRFDFSHAEAMKPQQIRQVEDIVNAQIRRN 623

Query: 134 SPFLKQYLSHEKAR-----ELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPH 187
            P   Q +  E+A+      LF  K +A              V +   G++  +LC G H
Sbjct: 624 LPIDTQEMGLEEAKAKGAMALFGEKYDA-------------QVRVLSMGDFSTELCGGTH 670

Query: 188 VRSTGQVKKF 197
              TG +  F
Sbjct: 671 AERTGDIGLF 680


>gi|91788770|ref|YP_549722.1| alanyl-tRNA synthetase [Polaromonas sp. JS666]
 gi|123355561|sp|Q129G8|SYA_POLSJ RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|91697995|gb|ABE44824.1| alanyl-tRNA synthetase [Polaromonas sp. JS666]
          Length = 878

 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 18/143 (12%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKM 126
           R+  V  HS  H+M +A++ +  E VQ     +  +   +DF    P + D++ +IE ++
Sbjct: 561 RAATVRNHSATHLMHKALREVLGEHVQQKGSLVNAERTRFDFAHNAPVTDDQIREIEARV 620

Query: 127 Q-EI---IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
             EI   +A D+  +    + +    +   +K   KV +L    +KE            L
Sbjct: 621 NAEILSNVATDASVMDMEAAQKTGAMMLFGEKYGDKVRVLSIGSSKE------------L 668

Query: 183 CRGPHVRSTGQVKKFFKLMKVAG 205
           C G HV  TG +   FK++  +G
Sbjct: 669 CGGTHVTRTGDI-GLFKIVAESG 690


>gi|303257717|ref|ZP_07343729.1| alanine--tRNA ligase [Burkholderiales bacterium 1_1_47]
 gi|331000999|ref|ZP_08324635.1| alanine--tRNA ligase [Parasutterella excrementihominis YIT 11859]
 gi|302859687|gb|EFL82766.1| alanine--tRNA ligase [Burkholderiales bacterium 1_1_47]
 gi|329569774|gb|EGG51538.1| alanine--tRNA ligase [Parasutterella excrementihominis YIT 11859]
          Length = 875

 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 33/142 (23%), Positives = 65/142 (45%), Gaps = 10/142 (7%)

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           E+ R      HS  H+M +A++ +    VQ     +  D   +DF    P + +++ ++E
Sbjct: 554 EENREATARNHSVTHLMHKALREVLGAHVQQRGSMVNGDRTRFDFVHTSPMTREQINEVE 613

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
             + + I R++P   + +  ++A++            +L      ENV +   G   +LC
Sbjct: 614 DIVNKEILRNAPTQTRVMPIDEAKKT--------NAVMLFGEKYGENVRVLNIGSSCELC 665

Query: 184 RGPHVRSTGQVKKFFKLMKVAG 205
            G HV+ TG +   FK++  +G
Sbjct: 666 GGTHVQRTGDI-GMFKIISESG 686


>gi|289449623|ref|YP_003475535.1| serine--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5]
 gi|289184170|gb|ADC90595.1| serine--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5]
          Length = 432

 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 48/221 (21%), Positives = 93/221 (42%), Gaps = 15/221 (6%)

Query: 244 RDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQ 298
           + H +LA  +D+   A      G+G   +   G ++   L++Y M+  +KD+YE +  P 
Sbjct: 136 KHHVELAESLDIIDYARGSKLSGNGFWIYKNMGARLEWALLNYFMQEHLKDNYEMLLVPH 195

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L+      +G +  ++ ++F +   + T +  R F L P      V ++   +    +L
Sbjct: 196 ILNYTCGFTAGQFPKFKEDVFWLVSEEGTEEANRQFIL-PTAETALVNLYRDEILDESDL 254

Query: 359 PVRLAEFGSVYRNEPSGSL----HGLMRVRGFTQDDAHVFCTKE---QMFNECL-KIHNL 410
           P +   +   YR E +GS      G++R   F + +   +   E   Q F+E + K   L
Sbjct: 255 PKKFFAYTPCYRKE-AGSYRAEERGMIRGHQFNKIEMFQYTLPENSAQAFDELVDKACRL 313

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
           +  +   F   K+     +    R     +W  + N  K V
Sbjct: 314 VAGLGLHFRLSKLAAGDCSASMARTDDIEIWIPSMNDYKEV 354


>gi|226366073|ref|YP_002783856.1| prolyl-tRNA synthetase [Rhodococcus opacus B4]
 gi|254782912|sp|C1B2Z4|SYP_RHOOB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226244563|dbj|BAH54911.1| prolyl-tRNA synthetase [Rhodococcus opacus B4]
          Length = 581

 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 34/143 (23%), Positives = 64/143 (44%), Gaps = 15/143 (10%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           +EI+ P +L +  ++ S  W  Y   +F +K  D    D        +  P H  +F   
Sbjct: 69  QEISLPALLPREPYEASNRWTEYGEGLFRLK--DRKGGDY-------LLGPTHEELFALT 119

Query: 352 LK----SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
           +K    SY++ PV L +  + YR+E      G++R R F   D++ F   ++   E  + 
Sbjct: 120 VKGEYNSYKDFPVTLYQVQTKYRDEER-PRAGILRGREFVMKDSYSFDLTDEGLTESYRA 178

Query: 408 H-NLIISIYKDFGFEKIMVKLST 429
           H +    I+   G + ++V  ++
Sbjct: 179 HRDAYERIFARLGVKYVIVSATS 201


>gi|197301811|ref|ZP_03166881.1| hypothetical protein RUMLAC_00537 [Ruminococcus lactaris ATCC
           29176]
 gi|197299251|gb|EDY33781.1| hypothetical protein RUMLAC_00537 [Ruminococcus lactaris ATCC
           29176]
          Length = 558

 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 77/194 (39%), Gaps = 16/194 (8%)

Query: 15  KNFPVHATGSDVAESISRSLAKKAVAVAING-KVCDLSDPV-REGSIEIITPEDPRSLAV 72
           K +    T S++A         + V   ++G  + +L   V ++  I  +T  DP     
Sbjct: 15  KEYKKGTTYSEIAREFQPDYEHQIVLAMVDGYHLRELRKTVEKDCEIHFLTTADPIGNDT 74

Query: 73  IRHSCAHIMAEAVQSIWP---------EVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            R S   +  +A   I            V   +GP    GFY   DK++      LA++E
Sbjct: 75  YRRSLCFLFIKAFHDISGHDLKHRVRIRVHFTMGP----GFYCTVDKKEKPDETFLAKVE 130

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M+E+     P  K+ +   +A ELF  K   Y  E L +      V LY   E+ D  
Sbjct: 131 ARMRELAKMAIPIQKRCIDTGEAVELFH-KYGMYDKERLFAYRRVSKVNLYSINEFEDYF 189

Query: 184 RGPHVRSTGQVKKF 197
            G  V  TG +K F
Sbjct: 190 YGYMVPDTGYLKYF 203


>gi|95928611|ref|ZP_01311358.1| alanyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
 gi|95135401|gb|EAT17053.1| alanyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
          Length = 880

 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 32/140 (22%), Positives = 66/140 (47%), Gaps = 11/140 (7%)

Query: 68  RSLAVIRHSCAHIM-AEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKM 126
           R+   + HS  HI+ A   + +   V+ A   +  D   +DF      + +E+ Q+E+K+
Sbjct: 562 RTACALNHSATHILQAVLCEVLGDHVKQAGSQVTPDRLRFDFIHFSALTPEEIQQVEEKV 621

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRG 185
            + I  ++  +   ++ + A +   +     K          ++V + R G++  +LC G
Sbjct: 622 NQRIRENAGVMTDVMNTDDAVKAGATALFGEKY--------GDSVRVVRMGDFSMELCGG 673

Query: 186 PHVRSTGQVKKFFKLMKVAG 205
            HV +TG +   FK+++ AG
Sbjct: 674 THVSATGNI-GLFKIVQEAG 692


>gi|205830051|sp|B2IHX3|SYA_BEII9 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
          Length = 898

 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 59/229 (25%), Positives = 95/229 (41%), Gaps = 32/229 (13%)

Query: 54  VREGSI----EIITPEDPRSLAVIR--HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYY 106
           V EG++    E+ T  D      +R  HS  H++ EA++ +  +     G ++  D   +
Sbjct: 537 VEEGAVVPGLEVRTLVDHSRRTAVRANHSATHLLHEALRQVLGDHIAQKGSLVAPDRLRF 596

Query: 107 DFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEK-----ARELFESK--KEAYKV 159
           DF   +P + +E  QIE     +I  ++P   + +S E      AR LF  K   E   V
Sbjct: 597 DFSHPKPVTPEEWTQIEDIANSVILENAPVTTKLMSIEDAMGSGARALFGEKYGDEVRVV 656

Query: 160 EILESIPAKENVTLYRQGEWF--DLCRGPHVRSTGQVKKFFKLMK--VAGAYWRGDSNRP 215
            +       ++ T  R    F  +LC G HV  TG +     + +  VA    R ++   
Sbjct: 657 SMGYDEDKADDSTDGRIAPPFSVELCGGTHVARTGDIGLLTIISESAVAAGVRRIEAKTG 716

Query: 216 MLSRIYGTAWNTQQELTQYLYFL-----EESEKR------DHRKLAREM 253
             +R +    NTQ  L   L        +E+ KR      + RKL RE+
Sbjct: 717 SSARHH---LNTQASLLHSLAAQLKSPEDEASKRLSALIEERRKLDREL 762


>gi|242280583|ref|YP_002992712.1| alanyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
 gi|242123477|gb|ACS81173.1| alanyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
          Length = 880

 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 34/142 (23%), Positives = 67/142 (47%), Gaps = 19/142 (13%)

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFSSDELA 120
           ++PE  R      H+  H++  A++ +  +     G ++  D   +DF      + +E+ 
Sbjct: 557 VSPE-TRVATERNHTVTHLLHAALKKVLGDHVKQSGSLVGPDRLRFDFTHIAAMTPEEIG 615

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEK-----ARELFESKKEAYKVEILESIPAKENVTLYR 175
           ++E ++   I  D+P + Q +S+++     A  LF  +K    V ++E IP         
Sbjct: 616 EVENEVNRAILGDTPVVVQEMSNDEAAAKGATALF-GEKYGDVVRVVE-IP--------- 664

Query: 176 QGEWFDLCRGPHVRSTGQVKKF 197
            GE  +LC G H+++TG+   F
Sbjct: 665 -GESMELCGGTHLKATGEAGTF 685


>gi|149193855|ref|ZP_01870953.1| prolyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
 gi|149135808|gb|EDM24286.1| prolyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
          Length = 574

 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 51/114 (44%), Gaps = 9/114 (7%)

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+++G    Y   +  ++      +    F L P N    V +    +KSY++LP+ L
Sbjct: 78  ELWEETGRAKKYGDELLRIED-----RKGNKFVLSPTNEESIVDLVRSYVKSYKQLPINL 132

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
            +    +R+E      GL+R R F   DA+ F   E+  +   +  NL+   YK
Sbjct: 133 YQINLKFRDEARPRF-GLLRGREFIMKDAYSFHKDEEDLD---REFNLMEETYK 182


>gi|72162469|ref|YP_290126.1| alanyl-tRNA synthetase [Thermobifida fusca YX]
 gi|83305862|sp|Q47N66|SYA_THEFY RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|71916201|gb|AAZ56103.1| alanyl-tRNA synthetase [Thermobifida fusca YX]
          Length = 889

 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 76/171 (44%), Gaps = 24/171 (14%)

Query: 54  VREGSIEI-----ITPEDPRSLAVIR-HSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYY 106
           VREG + +        +  R  +V R HS  H++  A+++         G   + G   +
Sbjct: 547 VREGEVVVDDTVHAAIDTGRRASVSRSHSATHLIHSALRNTLGPSAGQAGSENQPGRLRF 606

Query: 107 DFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIP 166
           DF  ++P  + E+AQ+E+++ E++AR+     QYL          +  EA ++  L    
Sbjct: 607 DFTSDKPLDATEIAQVEEEVNEVLARNIEV--QYLE--------TTLDEALRMGALAMFG 656

Query: 167 AK--ENVTLYRQGEWF-DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNR 214
            K    V +    E+  +LC G HV +TGQ      L+KV G    G   R
Sbjct: 657 EKYGNRVRVVDMTEYSRELCGGTHVAATGQ----LGLVKVLGESSVGSGVR 703


>gi|167390116|ref|XP_001739217.1| uridine cytidine kinase I [Entamoeba dispar SAW760]
 gi|165897194|gb|EDR24431.1| uridine cytidine kinase I, putative [Entamoeba dispar SAW760]
          Length = 534

 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 50/205 (24%), Positives = 88/205 (42%), Gaps = 14/205 (6%)

Query: 2   PSDIK---LTFPDGS--IKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE 56
           P DI    +TF DG+  I   P+H T      S++ S     V + +NG+V   ++ +  
Sbjct: 20  PIDISKTVVTFTDGTQEIHTRPLHLTNLLTHPSLNNS---DLVGIMVNGRVYS-TNAIIN 75

Query: 57  GSIEIITP---EDPRSLAVIRHSCAHIMAEAV-QSIWPEVQVAIGPIIEDGFYYDFDKEQ 112
             I  ITP         ++ R S   + A A   +   +  V +   + +G+  +    +
Sbjct: 76  IGIANITPVFLNSYEGFSIYRRSLVMVFATAAFMTYGTKFGVTVEHHVNNGYCINKSNGK 135

Query: 113 PFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVT 172
            F+ +E   I+ KM+E+I  +    +  LSH +A   F        + +L+S   +E   
Sbjct: 136 EFTEEECNTIKNKMKELINENKEIKEVVLSHAEAINYFTETNRGMTLSLLKSTNNEEVKC 195

Query: 173 LYRQGEWFDLCRGPHVRSTGQVKKF 197
            Y +G +  L   P +  TG +K F
Sbjct: 196 SYLEG-FMTLFIRPLLGRTGILKDF 219


>gi|163839404|ref|YP_001623809.1| prolyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
 gi|162952880|gb|ABY22395.1| prolyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
          Length = 619

 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 47/208 (22%), Positives = 87/208 (41%), Gaps = 23/208 (11%)

Query: 232 TQYLYFLEE----SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI 287
           T +L  L E    +E   H+ + R     +I     G+  W   G ++   + + +R ++
Sbjct: 20  TLFLRTLREDPVDAEIASHKLMVRA---GYIRRAAPGIYSWLPLGLRVLGKVEAIIREEM 76

Query: 288 KD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA 346
                +E++ P +L    ++ +  W  Y   +F +K  D    D        +  P H  
Sbjct: 77  AAIGSQEVHFPALLPCEPYEATNRWTEYGDGIFRLK--DRKGNDY-------LLAPTHEE 127

Query: 347 VFNHGLK----SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN 402
           +F   +K    SY++LPV L +  + YR+E +    GLMR R F   D++ F   +   +
Sbjct: 128 MFTLLVKDLYGSYKDLPVSLFQIQNKYRDE-ARPRAGLMRGREFIMKDSYSFDIDDAGLD 186

Query: 403 ECLKIHNLI-ISIYKDFGFEKIMVKLST 429
              + H      I++    E + VK + 
Sbjct: 187 ISYEAHRAAYFKIFERLSLEVVAVKATA 214


>gi|160892619|ref|ZP_02073409.1| hypothetical protein CLOL250_00149 [Clostridium sp. L2-50]
 gi|156865660|gb|EDO59091.1| hypothetical protein CLOL250_00149 [Clostridium sp. L2-50]
          Length = 888

 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 42/169 (24%), Positives = 74/169 (43%), Gaps = 23/169 (13%)

Query: 51  SDPVREGSI-EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDF 108
           S  ++ GS  ++    D R+L    HS  H++ +A++ +  + V+ A   + ED   +DF
Sbjct: 549 SGELKNGSTAKLSVTADRRALICKNHSATHLLQKALKMVLGDHVEQAGSYVSEDRLRFDF 608

Query: 109 DKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESK-KEAYKVEIL 162
              Q  + +E+A++E  + E I +D     + +S E A++     LF  K  E  +V  +
Sbjct: 609 THFQAMTPEEIAKVEAIVNEQIDKDLKVKTEVMSIEDAKKTGAMALFGDKYGEKVRVVSM 668

Query: 163 ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF--FKLMKVAGAYWR 209
           +                 + C G HV +TG +  F     M VA    R
Sbjct: 669 DDFSV-------------EFCGGTHVPNTGVIGTFKIISEMGVAAGVRR 704


>gi|182679359|ref|YP_001833505.1| alanyl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC
           9039]
 gi|182635242|gb|ACB96016.1| alanyl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC
           9039]
          Length = 901

 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 59/229 (25%), Positives = 95/229 (41%), Gaps = 32/229 (13%)

Query: 54  VREGSI----EIITPEDPRSLAVIR--HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYY 106
           V EG++    E+ T  D      +R  HS  H++ EA++ +  +     G ++  D   +
Sbjct: 540 VEEGAVVPGLEVRTLVDHSRRTAVRANHSATHLLHEALRQVLGDHIAQKGSLVAPDRLRF 599

Query: 107 DFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEK-----ARELFESK--KEAYKV 159
           DF   +P + +E  QIE     +I  ++P   + +S E      AR LF  K   E   V
Sbjct: 600 DFSHPKPVTPEEWTQIEDIANSVILENAPVTTKLMSIEDAMGSGARALFGEKYGDEVRVV 659

Query: 160 EILESIPAKENVTLYRQGEWF--DLCRGPHVRSTGQVKKFFKLMK--VAGAYWRGDSNRP 215
            +       ++ T  R    F  +LC G HV  TG +     + +  VA    R ++   
Sbjct: 660 SMGYDEDKADDSTDGRIAPPFSVELCGGTHVARTGDIGLLTIISESAVAAGVRRIEAKTG 719

Query: 216 MLSRIYGTAWNTQQELTQYLYFL-----EESEKR------DHRKLAREM 253
             +R +    NTQ  L   L        +E+ KR      + RKL RE+
Sbjct: 720 SSARHH---LNTQASLLHSLAAQLKSPEDEASKRLSALIEERRKLDREL 765


>gi|313888208|ref|ZP_07821882.1| alanine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
 gi|312845898|gb|EFR33285.1| alanine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
          Length = 870

 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 33/138 (23%), Positives = 64/138 (46%), Gaps = 21/138 (15%)

Query: 75  HSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++  A++ +    V  A   ++ D   +DF      + +E+A++E+++ E I   
Sbjct: 562 HSVTHLLHRALKDVLGSHVNQAGSLVMADRMRFDFSHFDAMTKEEIAEVERRVNEKIFEG 621

Query: 134 SPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWF-DLCRGPH 187
            P   +    E+A+E     LFE K              ++ V +   G++  +LC G H
Sbjct: 622 LPVETKVTGLEEAKEMGAIGLFEGK-------------YQDQVRVLSMGDYSRELCGGTH 668

Query: 188 VRSTGQVKKFFKLMKVAG 205
           V +T ++   FK++  +G
Sbjct: 669 VSNTSEI-SMFKILSESG 685


>gi|313471497|sp|B8B4H5|SYAP_ORYSI RecName: Full=Probable alanyl-tRNA synthetase, chloroplastic;
           AltName: Full=Alanine--tRNA ligase; Short=AlaRS; Flags:
           Precursor
 gi|218197887|gb|EEC80314.1| hypothetical protein OsI_22356 [Oryza sativa Indica Group]
          Length = 996

 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 35/156 (22%), Positives = 73/156 (46%), Gaps = 24/156 (15%)

Query: 54  VREGSIEIITPEDPRSLAVIR------HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYY 106
           +++GS+E+    D    A +R      H+  H++  A++SI        G ++  D   +
Sbjct: 650 IKQGSVEVGKEIDAAVDAKLRQGAKAHHTATHLLQSALKSIIGSETSQAGSLVAFDRLRF 709

Query: 107 DFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEI 161
           DF+  +P S +EL +IE  + + ++  +    + +  + A+      +F  +K   +V +
Sbjct: 710 DFNFHRPLSEEELMKIESLVNQWVSSATHLETKVMDLQDAKNAGAIAMF-GEKYGEQVRV 768

Query: 162 LESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
           +E +P          G   +LC G HV +T +++ F
Sbjct: 769 VE-VP----------GVSMELCGGTHVSNTAEIRGF 793


>gi|118588631|ref|ZP_01546039.1| Alanyl-tRNA synthetase, class IIc:Phosphoesterase,
           DHHA1:Alanyl-transfer RNA synthetase [Stappia aggregata
           IAM 12614]
 gi|118438617|gb|EAV45250.1| Alanyl-tRNA synthetase, class IIc:Phosphoesterase,
           DHHA1:Alanyl-transfer RNA synthetase [Stappia aggregata
           IAM 12614]
          Length = 885

 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 32/128 (25%), Positives = 60/128 (46%), Gaps = 12/128 (9%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++ EA++ +        G ++  +   +DF   +P S +ELA +E    EI+ ++
Sbjct: 563 HSATHLVHEALREVLGNHVAQKGSLVTPERLRFDFSHPKPVSDEELATVESFANEIVLQN 622

Query: 134 SPFLKQYLSHEKARE-----LFESK--KEAYKVEILESIPAKENVTLYRQGEWFDLCRGP 186
           +P   + ++ + A E     LF  K  +E   V +  ++   +    Y      +LC G 
Sbjct: 623 APVDTRLMAVDDAIEAGAMALFGEKYGEEVRVVSMGTALHGPKQGKPYS----LELCGGT 678

Query: 187 HVRSTGQV 194
           HV+ TG +
Sbjct: 679 HVKRTGDI 686


>gi|321472321|gb|EFX83291.1| hypothetical protein DAPPUDRAFT_127919 [Daphnia pulex]
          Length = 406

 Score = 43.1 bits (100), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 46/196 (23%), Positives = 91/196 (46%), Gaps = 24/196 (12%)

Query: 247 RKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLW 305
           +KL  EM +  + ++  G+      G +  + L+  +  ++K    +++  P +   +LW
Sbjct: 5   QKLLNEMGI--VRQNSPGLFTLTPLGVRSLEKLVKIVDDELKYVGCQKLQLPILTAGNLW 62

Query: 306 QQSGHWDSYRANMFAVKCADDTIKD--LRTFALKPMNCPGHVAVFNHGLK--SYRELPVR 361
           + +G W+S  + +        TIKD   R + L P +    +  F   L   ++++LP++
Sbjct: 63  KTTGRWESTGSELL-------TIKDRHARDYVLSPTH-EEAITDFVASLPQLTHKQLPLK 114

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           L +  S +R+E      GL+R R FT  D + F   ++      + ++LI + Y      
Sbjct: 115 LYQITSKFRDEIKPRF-GLLRGREFTMKDLYTF---DKTVEAAHETYDLICTAY-----N 165

Query: 422 KIMVKLSTRPEKRVGS 437
           +I  +L+    K VGS
Sbjct: 166 RIFQRLNVPFVKVVGS 181


>gi|227503402|ref|ZP_03933451.1| prolyl-tRNA synthetase [Corynebacterium accolens ATCC 49725]
 gi|227075905|gb|EEI13868.1| prolyl-tRNA synthetase [Corynebacterium accolens ATCC 49725]
          Length = 594

 Score = 43.1 bits (100), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 38/174 (21%), Positives = 77/174 (44%), Gaps = 18/174 (10%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +  +A    G+  W   G +  + +   +R+++     +E+  P 
Sbjct: 24  DAEVPSHKLLVRAGYVRRVA---PGIYTWLPLGLRALRKIEDVVRQEMDAIGGQEMLFPA 80

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L +  ++++  W  Y  N+F  +  D    DL       +  P H  +F + +K    S
Sbjct: 81  LLPREPYEKTNRWVEYGPNLF--RLQDRKNADL-------LLGPTHEEMFANAVKDMYSS 131

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
           Y++ PV L +  + YR+E      G++R R F   D++ F   ++  +     H
Sbjct: 132 YKDFPVTLYQIQTKYRDEER-PRAGVLRGREFVMKDSYSFDMNDEGLDSSYARH 184


>gi|156841840|ref|XP_001644291.1| hypothetical protein Kpol_1030p43 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156114930|gb|EDO16433.1| hypothetical protein Kpol_1030p43 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 580

 Score = 43.1 bits (100), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 35/159 (22%), Positives = 73/159 (45%), Gaps = 18/159 (11%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKDDYE--EINTPQVLDQHLWQQSGHWDSYRANMFA 320
           SG I W   G +  + L   +  K++++    E+    +  + LW++S  W++    +F 
Sbjct: 50  SGFINWLPLGLRSLRKLELLIHNKMQNEAGAYEVKLSTISPKDLWEKSNRWNN--KELFK 107

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE--PSGSLH 378
           +K + D       + L          +  + + SY+ +P+ + + G+ +R+E  P G   
Sbjct: 108 LKDSKDA-----QYCLTATCEEDITNLMMNYITSYKNMPITVYQIGNKFRDEKRPRG--- 159

Query: 379 GLMRVRGFTQDDAHVFCTKE----QMFNECLKIHNLIIS 413
           GL+R R F   DA+ F   +    + FN   K+++ + +
Sbjct: 160 GLLRAREFLMKDAYSFARSKAQAIEAFNNMNKVYDSLFT 198


>gi|225021310|ref|ZP_03710502.1| hypothetical protein CORMATOL_01329 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224946043|gb|EEG27252.1| hypothetical protein CORMATOL_01329 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 744

 Score = 43.1 bits (100), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 1/61 (1%)

Query: 10  PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPEDPR 68
           P G + N PV AT  D A ++   +  + +   INGK+  L   ++ G  +EI T +DP+
Sbjct: 409 PKGDVVNLPVDATPVDFAYTVHTEVGHRCIGAKINGKLVALESKLKSGDRVEIFTSKDPK 468

Query: 69  S 69
           +
Sbjct: 469 A 469


>gi|270157134|ref|ZP_06185791.1| alanyl-tRNA synthetase [Legionella longbeachae D-4968]
 gi|289164461|ref|YP_003454599.1| alanyl-tRNA synthetase [Legionella longbeachae NSW150]
 gi|269989159|gb|EEZ95413.1| alanyl-tRNA synthetase [Legionella longbeachae D-4968]
 gi|288857634|emb|CBJ11474.1| alanyl-tRNA synthetase [Legionella longbeachae NSW150]
          Length = 860

 Score = 43.1 bits (100), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 46/205 (22%), Positives = 91/205 (44%), Gaps = 18/205 (8%)

Query: 36  KKAVAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSI-WPEVQV 94
           KK  A+   G++ D +  +++  +      + R    + H+  H++  A++++  P+VQ 
Sbjct: 515 KKGQAIVHYGEMLDGTATLKQ-FVHAQIDNERREAIRLNHTATHLLHAALKAVVGPQVQQ 573

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
               +  +   +DF   +  +++++ +IE  + E +  ++  + + +         ES K
Sbjct: 574 KGSLVDAERARFDFSHFESLTAEQIQEIECLVNEQVRANNEVVTRLMD-------IESAK 626

Query: 155 EAYKVEILESIPAKENVTLYRQGEWF-DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSN 213
           ++  V +     A E V +   GE+  +LC G H R TG +     L K+   Y      
Sbjct: 627 KSGAVALFGEKYADE-VRVLSMGEFSKELCGGTHARRTGDI----GLFKIIAEYGIASGI 681

Query: 214 R--PMLSRIYGTAW-NTQQELTQYL 235
           R   M++  Y  AW N QQ L   L
Sbjct: 682 RRIEMVTGRYALAWVNEQQALLNEL 706


>gi|254429854|ref|ZP_05043561.1| RelA/SpoT family protein [Alcanivorax sp. DG881]
 gi|196196023|gb|EDX90982.1| RelA/SpoT family protein [Alcanivorax sp. DG881]
          Length = 703

 Score = 43.1 bits (100), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 1/63 (1%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIE 60
           P +  +  P G IK  P  AT  D A ++   +  K VA  I+GK+  LS P+  G +++
Sbjct: 385 PDEAYVFTPKGDIKELPGGATAVDFAYAVHTKVGNKCVAARIDGKLAALSTPLESGQTVK 444

Query: 61  IIT 63
           IIT
Sbjct: 445 IIT 447


>gi|153938938|ref|YP_001391861.1| alanyl-tRNA synthetase [Clostridium botulinum F str. Langeland]
 gi|205830033|sp|A7GGF1|SYA_CLOBL RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|152934834|gb|ABS40332.1| alanine--tRNA ligase [Clostridium botulinum F str. Langeland]
          Length = 879

 Score = 43.1 bits (100), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 36/149 (24%), Positives = 73/149 (48%), Gaps = 21/149 (14%)

Query: 65  EDPRSLAVIRHSCAHIM-AEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           E+ R+     H+  HI+ A  ++ +   VQ +   + ++   +DF   +  S DEL ++E
Sbjct: 556 EERRNNIRKNHTATHILHAALIKVVGDHVQQSGSYVDDERLRFDFSHFEAVSEDELKEVE 615

Query: 124 KKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGE 178
           K + + I + +    + +  E+A++     LF++K              K++V +   G+
Sbjct: 616 KIVNKEIMKANAVNTKVMDIEEAKQQGAIALFDNK-------------YKDDVRVVSVGD 662

Query: 179 WF-DLCRGPHVRSTGQVKKFFKLMKVAGA 206
           +  +LC G HV ++GQ+   FK++  AG 
Sbjct: 663 FSKELCGGTHVSNSGQI-GMFKIISEAGV 690


>gi|170758241|ref|YP_001787882.1| alanyl-tRNA synthetase [Clostridium botulinum A3 str. Loch Maree]
 gi|205830034|sp|B1KXB7|SYA_CLOBM RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|169405230|gb|ACA53641.1| alanine--tRNA ligase [Clostridium botulinum A3 str. Loch Maree]
          Length = 879

 Score = 43.1 bits (100), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 34/139 (24%), Positives = 70/139 (50%), Gaps = 21/139 (15%)

Query: 75  HSCAHIM-AEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           H+  HI+ A  ++ +   VQ +   + ++   +DF   +  S DEL ++EK + + I + 
Sbjct: 566 HTATHILHAALIKVVGDHVQQSGSYVDDERLRFDFSHFEAVSEDELKEVEKIVNKEIMKA 625

Query: 134 SPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWF-DLCRGPH 187
           +    + ++ E+A++     LF++K              K++V +   G++  +LC G H
Sbjct: 626 NAVNTKVMNIEEAKQQGAIALFDNK-------------YKDDVRVVSVGDFSKELCGGTH 672

Query: 188 VRSTGQVKKFFKLMKVAGA 206
           V ++GQ+   FK++  AG 
Sbjct: 673 VSNSGQI-GMFKVVSEAGV 690


>gi|305681298|ref|ZP_07404105.1| GTP diphosphokinase [Corynebacterium matruchotii ATCC 14266]
 gi|305659503|gb|EFM49003.1| GTP diphosphokinase [Corynebacterium matruchotii ATCC 14266]
          Length = 763

 Score = 43.1 bits (100), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 1/61 (1%)

Query: 10  PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPEDPR 68
           P G + N PV AT  D A ++   +  + +   INGK+  L   ++ G  +EI T +DP+
Sbjct: 428 PKGDVVNLPVDATPVDFAYTVHTEVGHRCIGAKINGKLVALESKLKSGDRVEIFTSKDPK 487

Query: 69  S 69
           +
Sbjct: 488 A 488


>gi|189463200|ref|ZP_03011985.1| hypothetical protein BACCOP_03913 [Bacteroides coprocola DSM 17136]
 gi|189430179|gb|EDU99163.1| hypothetical protein BACCOP_03913 [Bacteroides coprocola DSM 17136]
          Length = 872

 Score = 43.1 bits (100), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 60/134 (44%), Gaps = 16/134 (11%)

Query: 66  DPRSLAVIRHSCAHIMAEAV-QSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D R+     HSC H++ EA+ Q +   V+     +  D   +DF   Q  + +++ ++E 
Sbjct: 554 DKRAACAANHSCTHLLDEALRQVLGAHVEQKGSLVTPDSLRFDFSHFQKVTPEQIREVEH 613

Query: 125 KMQEIIARDSPFLKQY--LSHEKARELFESK--KEAYKVEILESIPAKENVTLYRQGEWF 180
            +   I  + P L +Y  L  EKA+EL       E Y  E          V + + G   
Sbjct: 614 LVNAKIRENVP-LTEYRNLPIEKAKELGAIALFGEKYGDE----------VRVVQFGSSI 662

Query: 181 DLCRGPHVRSTGQV 194
           + C G HV +TG++
Sbjct: 663 EFCGGTHVSATGKI 676


>gi|50426331|ref|XP_461762.1| DEHA2G04972p [Debaryomyces hansenii CBS767]
 gi|49657432|emb|CAG90219.1| DEHA2G04972p [Debaryomyces hansenii]
          Length = 462

 Score = 43.1 bits (100), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 52/220 (23%), Positives = 90/220 (40%), Gaps = 18/220 (8%)

Query: 241 SEKRDHRKLAREMDL--FHIAEDGSGVIFWHR--KGWKIFQTLISYMRRKIK-DDYEEIN 295
           + K DH+ +  ++++  F+IA   SG  +++    G  + Q LI Y   K + + Y  I 
Sbjct: 166 TSKFDHKTIGEKLNIMNFNIAARISGSSWYYLVGDGALLEQALIQYGLSKARVNGYTMII 225

Query: 296 TPQVLDQHLWQQSG-HWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
            P ++   +    G   +         +  +D +  + T  + P+      + F     S
Sbjct: 226 PPSIVKNEIISACGFKPNDQNGEQQVYQLTNDDLSLIGTAEI-PLGAYHSSSTF----PS 280

Query: 355 YRELPVRLAEFGSVYRNEPSG---SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI 411
            +  P++       YR E         GL RV  FT+ +   F T ++   E   + NL 
Sbjct: 281 SQNYPIKYVGISRSYRAEAGARGSDTKGLYRVHEFTKVELFHFTTPDKAAQELEDLKNLQ 340

Query: 412 ISIYKDFGFEKIMVKLSTRPEKRVGSDALWD-DAENIMKG 450
           ISI +D G    M+ +   P   +G+ AL   D E  M G
Sbjct: 341 ISIIEDLGLSAKMINM---PSSDLGAPALKKFDCEAWMPG 377


>gi|321309527|ref|YP_004191856.1| prolyl-tRNA synthetase [Mycoplasma haemofelis str. Langford 1]
 gi|319801371|emb|CBY92017.1| prolyl-tRNA synthetase [Mycoplasma haemofelis str. Langford 1]
          Length = 467

 Score = 43.1 bits (100), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 70/368 (19%), Positives = 139/368 (37%), Gaps = 72/368 (19%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLD-QHLWQQSGHWDSYRANMFAV 321
           G +F   +GW I++ +  ++  K K    + ++ P  +    + ++      +   ++ V
Sbjct: 29  GTLFIGHRGWNIWEKIRDFIDAKYKQKGIKNVSFPTFIPVAEIEREKSRLSGFNPEIYLV 88

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
             + D  ++ + F L+P +       F + L+SY +LP+   ++ +V+R E +      +
Sbjct: 89  SRSGD--EERQNFFLRPTSEILFSHYFRNILESYEDLPLLFNQWCNVFRAEKNTK--AFL 144

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALW 441
           R   F   +AH     ++   E LK  +                                
Sbjct: 145 RTCEFHWQEAHTLHLSKEEAMEYLKFFH-------------------------------- 172

Query: 442 DDAENIMKGVLDTIKNSSQDRINTGVLLGE--------GAFYGPKFEYILKDAIGRDWQC 493
                      +T K+  +D +N   L GE        G+      E I+ D  G+  Q 
Sbjct: 173 -----------ETYKSLVKDLLNIAFLEGEKTVNERFPGSEKTLTLEAIMPD--GQALQI 219

Query: 494 GTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPL 548
            T   +  N    F+  Y +  +   +P   H+   G   R IG +I +   +    LPL
Sbjct: 220 ATSHYLSKNFTETFDVKYTSRENVVSYP---HQLSAGCSTRLIGALIMSHGDDSGLVLPL 276

Query: 549 WLSPIQ---AIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPI 605
            +  +     I+    +   E  ++ ++ LK +   +E DF + +  YKI+   +   P+
Sbjct: 277 SMFDVHIKFLIINGAVTEGSELHKKFSDELKGY--KVEWDFSSRSFGYKIKNEEMIGTPV 334

Query: 606 IIICGDKE 613
            +I G  E
Sbjct: 335 SVILGPSE 342


>gi|32267225|ref|NP_861257.1| prolyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449]
 gi|81835913|sp|Q7VFF0|SYP_HELHP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|32263278|gb|AAP78323.1| prolyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449]
          Length = 588

 Score = 43.1 bits (100), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 65/138 (47%), Gaps = 7/138 (5%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I + GSG+  +   G K+   +   ++ ++ K   +EI    V    LW++SG ++ Y  
Sbjct: 32  IQQIGSGIYNFLPLGKKLLDKVRFIVKEEMDKSGAQEILMGFVTPAELWRESGRYEQYGR 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            +  ++  D   +    F L P +      +  + +KSY++LP+ L +  S +R+E    
Sbjct: 92  EL--LRFVD---RKENEFVLGPTHEEVITHIAKNTIKSYKQLPLHLYQIHSKFRDELRPR 146

Query: 377 LHGLMRVRGFTQDDAHVF 394
             GLMR R F   D + F
Sbjct: 147 F-GLMRGREFIMKDGYSF 163


>gi|312793514|ref|YP_004026437.1| alanyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii 177R1B]
 gi|312180654|gb|ADQ40824.1| alanyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii 177R1B]
          Length = 883

 Score = 43.1 bits (100), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 47/196 (23%), Positives = 86/196 (43%), Gaps = 32/196 (16%)

Query: 54  VREGSIEIITP------EDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYY 106
           V +G I +++       E+ R   +  H+  H++  A++ I  +  Q +   +  D   +
Sbjct: 537 VLKGEISVLSSVVAKVNEELRLATMKNHTATHLLHSALRKILGQHAQQSGSQVTPDRLRF 596

Query: 107 DFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEI 161
           DF   +P S +++ +IEK +  +I +  P  K     + A +     LF+ K        
Sbjct: 597 DFAHYEPLSEEQIIEIEKMVNNVIQQAIPVEKIVTDLDSALKMGATALFDEKYSNV---- 652

Query: 162 LESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKFFKLM---KVAGAYWRGDSNRPML 217
                    V + + G++  +LC G HV +TGQ+   FK++    VA    R ++     
Sbjct: 653 ---------VRVIKIGDFSMELCGGTHVDNTGQI-GMFKIISESSVAAGVRRIEAITG-- 700

Query: 218 SRIYGTAWNTQQELTQ 233
           ++ Y    NTQQ L Q
Sbjct: 701 NKAYEFILNTQQTLKQ 716


>gi|126466028|ref|YP_001041137.1| glycyl-tRNA synthetase [Staphylothermus marinus F1]
 gi|126014851|gb|ABN70229.1| glycyl-tRNA synthetase [Staphylothermus marinus F1]
          Length = 588

 Score = 43.1 bits (100), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 2/72 (2%)

Query: 336 LKPMNCPGHVAVFNHGLKSYR-ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           L+P    G    F H L   R +LP+ +A+ G V RNE S    GL+R+R FT  +   F
Sbjct: 165 LRPETAQGMFVSFKHVLNIARNKLPLGIAQIGRVGRNEISPR-QGLLRLREFTIMELEFF 223

Query: 395 CTKEQMFNECLK 406
              E+ F E +K
Sbjct: 224 FDPEKAFEETMK 235


>gi|317403428|gb|EFV83940.1| alanyl-tRNA synthetase [Achromobacter xylosoxidans C54]
          Length = 874

 Score = 43.1 bits (100), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 68/144 (47%), Gaps = 20/144 (13%)

Query: 68  RSLAVIRHSCAHIMAEAV-QSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKM 126
           R+  V  HS  H+M +A+ Q +   VQ     +  D   +DF ++ P +++++A++E  +
Sbjct: 555 RARTVRNHSATHLMHKALRQVLGAHVQQRGSLVDPDKTRFDFAQDAPLTAEQIARVEAIV 614

Query: 127 QEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
              I  + P + Q ++++ A +     LF  +K    V +L+   ++E            
Sbjct: 615 NAEILANQPTVAQVMAYDDAVKGGAMALF-GEKYGDTVRVLDIGFSRE------------ 661

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAG 205
           LC G HV  TG +   FK++   G
Sbjct: 662 LCGGTHVGRTGDI-GLFKIVSEGG 684


>gi|311694210|gb|ADP97083.1| alanyl-tRNA synthetase, class IIc [marine bacterium HP15]
          Length = 876

 Score = 43.1 bits (100), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 61/129 (47%), Gaps = 16/129 (12%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++  A++ +  E     G +++ D   +DF   +  + ++L +IE+++ E I  +
Sbjct: 562 HSATHLLHAALRKVLGEHVSQKGSLVDPDKLRFDFSHFEAVTPEQLREIERQVNEQILEN 621

Query: 134 SPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           SP   +    EKA+E     LF  +K    V +L      +N ++       +LC G HV
Sbjct: 622 SPVQTEITDMEKAQEKGAMALF-GEKYGDVVRVLSM--GTDNYSV-------ELCGGTHV 671

Query: 189 RSTGQVKKF 197
             TG +  F
Sbjct: 672 SRTGDIGLF 680


>gi|227504819|ref|ZP_03934868.1| prolyl-tRNA synthetase [Corynebacterium striatum ATCC 6940]
 gi|227198669|gb|EEI78717.1| prolyl-tRNA synthetase [Corynebacterium striatum ATCC 6940]
          Length = 591

 Score = 43.1 bits (100), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 39/174 (22%), Positives = 75/174 (43%), Gaps = 18/174 (10%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R     ++     GV  W   G +    + + +R ++     +E+  P 
Sbjct: 19  DAEVLSHKLLVRAG---YVRRAAPGVYTWLPLGLRTLTKIENIVREEMNAIGGQEMLFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L +  ++ +  W  Y  N+F +K  D    D+       +  P H  +F   +K    S
Sbjct: 76  LLPREPYELTDRWTEYGDNLFRLK--DRKGADM-------LLGPTHEEMFAGAVKDMYSS 126

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
           Y++ PV L +  + YR+E      G++R R F   D++ F   ++  +E    H
Sbjct: 127 YKDFPVTLYQIQTKYRDEER-PRAGILRGREFVMKDSYSFDMTDEGLDESYMRH 179


>gi|218437893|ref|YP_002376222.1| alanyl-tRNA synthetase [Cyanothece sp. PCC 7424]
 gi|218170621|gb|ACK69354.1| alanyl-tRNA synthetase [Cyanothece sp. PCC 7424]
          Length = 881

 Score = 43.1 bits (100), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 62/132 (46%), Gaps = 9/132 (6%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           H+  H++  A++ I  +     G ++  D   +DF+  +P + +EL QIE  +   IA  
Sbjct: 566 HTATHLLQAALKKIVDDSVSQAGSLVTFDRLRFDFNCPRPVTPEELQQIEDLINNWIA-- 623

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQ 193
               + + +H     L E+K +       E   A+  V L   G   +LC G HVR+T +
Sbjct: 624 ----EAHEAHVSIMALEEAKAKGAVAMFGEKYGAEVRV-LDVPGVSMELCGGTHVRNTAE 678

Query: 194 VKKFFKLMKVAG 205
           +   FK+M  +G
Sbjct: 679 I-GLFKIMSESG 689


>gi|282162818|ref|YP_003355203.1| glycyl-tRNA synthetase [Methanocella paludicola SANAE]
 gi|282155132|dbj|BAI60220.1| glycyl-tRNA synthetase [Methanocella paludicola SANAE]
          Length = 580

 Score = 43.1 bits (100), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 4/85 (4%)

Query: 336 LKPMNCPGHVAVFNHGLKSYRE-LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           L+P    G    F   L+ YRE LP  + + G  YRNE S    G++R+R FTQ +A VF
Sbjct: 158 LRPETAQGMFVDFPRLLRFYREKLPFGVTQIGKSYRNEIS-PRQGVIRLREFTQAEAEVF 216

Query: 395 CTKEQMFN--ECLKIHNLIISIYKD 417
              +   +      + ++++S+Y +
Sbjct: 217 VNPKDKNSHPNFAAVRDMVLSLYDE 241


>gi|152997630|ref|YP_001342465.1| alanyl-tRNA synthetase [Marinomonas sp. MWYL1]
 gi|205830138|sp|A6W1F1|SYA_MARMS RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|150838554|gb|ABR72530.1| alanyl-tRNA synthetase [Marinomonas sp. MWYL1]
          Length = 872

 Score = 43.1 bits (100), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 43/181 (23%), Positives = 77/181 (42%), Gaps = 20/181 (11%)

Query: 35  AKKAVAVAINGKVCDLSDPVREGSI---EIITPEDPRSL---AVIRHSCAHIMAEAVQSI 88
           A K       GKV      VREG++   +++T E  RSL     + HS  H++ EA++ +
Sbjct: 514 AAKVTNTTKQGKVHLHHVDVREGTLAVGDLVTTEVDRSLRNATALNHSATHLLHEALRRV 573

Query: 89  WPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKAR 147
             +     G ++  +   +DF   +  ++ E  Q+E  + E +          L+HE   
Sbjct: 574 LGDHVQQKGSLVNPERLRFDFSHFEGMTAAEFEQVEDMVNEQV---------RLNHEVVT 624

Query: 148 ELFE---SKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVA 204
           E+ +   +K +  +    E   ++  V         +LC G HV  TG +   FK++   
Sbjct: 625 EVMDIDSAKAKGAQALFGEKYESQVRVLTMGADYSIELCGGTHVSRTGDI-GLFKIVSEG 683

Query: 205 G 205
           G
Sbjct: 684 G 684


>gi|253828011|ref|ZP_04870896.1| prolyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|253511417|gb|EES90076.1| prolyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
          Length = 578

 Score = 43.1 bits (100), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 36/142 (25%), Positives = 59/142 (41%), Gaps = 15/142 (10%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVL-----DQHLWQQSGHWD 312
           I + GSG+  +   G K+   +     R +K+  +E    +VL        LWQ SG +D
Sbjct: 32  IQQIGSGIYNFLPLGKKVLDKI----SRIVKNKMDEAGANEVLLGCVTPASLWQASGRYD 87

Query: 313 SYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE 372
            Y   +   K   +       F   P +      +    +KSY++LP+   +  + +R+E
Sbjct: 88  RYGKELLRFKDRKEN-----EFVFGPTHEETITELAKTYIKSYKQLPLHFYQIQTKFRDE 142

Query: 373 PSGSLHGLMRVRGFTQDDAHVF 394
                 GLMR R F   D + F
Sbjct: 143 IRPRF-GLMRGREFIMKDGYSF 163


>gi|118581577|ref|YP_902827.1| alanyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
 gi|205830173|sp|A1ATU9|SYA_PELPD RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|118504287|gb|ABL00770.1| alanyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
          Length = 878

 Score = 43.1 bits (100), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 42/167 (25%), Positives = 72/167 (43%), Gaps = 31/167 (18%)

Query: 54  VREGSIE--------IITPEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGF 104
           VREG I         +  PE  RS     H+  H++  A++ +  E V+ A   +  D  
Sbjct: 541 VREGIIRKGDGADLRVSRPE--RSATARNHTATHLLQAALRRVLGEHVKQAGSLVSPDRL 598

Query: 105 YYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKV 159
            +DF      +++E+ ++E  +   +  + P +   +    A E     LF+ K      
Sbjct: 599 RFDFIHFTAMTTEEIRRVETLVNGFVMDNQPVVITQMDMASAIEAGATALFDEKY----- 653

Query: 160 EILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKFFKLMKVAG 205
                    +NV + R GE   +LC G HVR+TG++   FK++   G
Sbjct: 654 --------GDNVRVVRAGEVSMELCGGTHVRATGEI-GLFKIITETG 691


>gi|325479403|gb|EGC82499.1| alanine--tRNA ligase [Anaerococcus prevotii ACS-065-V-Col13]
          Length = 870

 Score = 43.1 bits (100), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 32/130 (24%), Positives = 61/130 (46%), Gaps = 20/130 (15%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++ +A++ +  E     G ++ E+   +DF   +   ++EL Q+E  +   IA+ 
Sbjct: 564 HSATHLLDQALRDVLGESIKQAGSLVDENKLRFDFTHNKALLTEELRQVEDIVNNEIAKQ 623

Query: 134 SPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWF-DLCRGPH 187
           +   K+ + ++K++E     LFE K              K+ V +   G++  +LC G H
Sbjct: 624 NFVKKEVVDYKKSQEMGAIGLFEDK-------------YKDKVRVVSMGDYSKELCGGCH 670

Query: 188 VRSTGQVKKF 197
           V  T  +  F
Sbjct: 671 VNYTSDILMF 680


>gi|296117670|ref|ZP_06836254.1| proline--tRNA ligase [Corynebacterium ammoniagenes DSM 20306]
 gi|295969401|gb|EFG82642.1| proline--tRNA ligase [Corynebacterium ammoniagenes DSM 20306]
          Length = 585

 Score = 43.1 bits (100), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 40/174 (22%), Positives = 75/174 (43%), Gaps = 18/174 (10%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E   H+ L R   L   A    G+  W   G +  + +   +R ++     +E+  P 
Sbjct: 19  EAEVPSHKLLVRAGYLRRAA---PGIYSWLPLGLRTLRKIEDVVREEMNAIGGQELLFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L +  ++ +  W  Y  N+F +K  D    D+       +  P H  +F   +K    S
Sbjct: 76  LLPREPYELTDRWTEYGDNLFRLK--DRKGADM-------LLGPTHEEMFAQTVKDLYSS 126

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
           Y++ PV L +  + YR+E      G++R R F   D++ F   ++  ++    H
Sbjct: 127 YKDFPVTLYQIQTKYRDEER-PRAGILRGREFIMKDSYSFDMSDEGLDKSYARH 179


>gi|217031454|ref|ZP_03436959.1| hypothetical protein HPB128_21g12 [Helicobacter pylori B128]
 gi|216946654|gb|EEC25250.1| hypothetical protein HPB128_21g12 [Helicobacter pylori B128]
          Length = 517

 Score = 43.1 bits (100), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 51/119 (42%), Gaps = 7/119 (5%)

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SG  D Y   +   K  D    D   F L P        +  + +KSY++LPV L 
Sbjct: 19  LWEKSGRLDKYGKELLVFK--DRKNND---FVLSPTLEENITEIAANFIKSYKQLPVHLY 73

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT-KEQMFNECLKIHNLIISIYKDFGFE 421
           +  + +R+E      GL+R R F   D + F    E +  E L   +    I  D G +
Sbjct: 74  QIHTKFRDEIRPRF-GLVRAREFIMKDGYSFHEDAESLDKEFLNTQSAYKEILSDLGLD 131


>gi|224419073|ref|ZP_03657079.1| prolyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|313142583|ref|ZP_07804776.1| prolyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|313131614|gb|EFR49231.1| prolyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
          Length = 573

 Score = 43.1 bits (100), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 36/142 (25%), Positives = 59/142 (41%), Gaps = 15/142 (10%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVL-----DQHLWQQSGHWD 312
           I + GSG+  +   G K+   +     R +K+  +E    +VL        LWQ SG +D
Sbjct: 32  IQQIGSGIYNFLPLGKKVLDKI----SRIVKNKMDEAGANEVLLGCVTPASLWQASGRYD 87

Query: 313 SYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE 372
            Y   +   K   +       F   P +      +    +KSY++LP+   +  + +R+E
Sbjct: 88  RYGKELLRFKDRKEN-----EFVFGPTHEETITELAKTYIKSYKQLPLHFYQIQTKFRDE 142

Query: 373 PSGSLHGLMRVRGFTQDDAHVF 394
                 GLMR R F   D + F
Sbjct: 143 IRPRF-GLMRGREFIMKDGYSF 163


>gi|149743790|ref|XP_001488980.1| PREDICTED: glutamyl-prolyl-tRNA synthetase isoform 1 [Equus caballus]
          Length = 1512

 Score = 43.1 bits (100), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 65/307 (21%), Positives = 115/307 (37%), Gaps = 55/307 (17%)

Query: 334  FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH- 392
             A++P +       +   ++S+R+LP+RL ++ +V R E        +R R F   + H 
Sbjct: 1116 IAVRPTSETVMYPAYAKWVQSHRDLPIRLNQWCNVVRWEFKHP-QPFLRTREFLWQEGHS 1174

Query: 393  VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
             F T E+   E L+I +L   +Y++     ++    T  EK  G D             +
Sbjct: 1175 AFATFEEAAEEVLQILDLYAQVYEELLAIPVVKGRKTEKEKFAGGD---------YTTTI 1225

Query: 453  DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
            +   ++S   I  G     G  +   FE I +D                 P      Y N
Sbjct: 1226 EAFISASGRAIQGGTSHHLGQNFSKMFEIIFEDP--------------KTPGEKQFAYQN 1271

Query: 513  SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT-----SSAVEY 567
            S              +G   R IG+M      N+ L L P  A V  +      ++A+  
Sbjct: 1272 S--------------WGLTTRTIGVMTMVHGDNMGLVLPPRVACVQVVVIPCGITNALSE 1317

Query: 568  AQEIANLLKSH---------HLSIETDFR-NETINYKIREHSIKKIPIIIICGDKE-ASE 616
                A + K +         ++ +  D R N +  +K     +K +PI +  G ++  S 
Sbjct: 1318 EDRDALIAKCNDYRRRLLNVNIRVRVDLRDNYSPGWKFNHWELKGVPIRLEVGPRDMKSC 1377

Query: 617  RSIGIRR 623
            + + +RR
Sbjct: 1378 QFVAVRR 1384


>gi|47220882|emb|CAG03089.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1638

 Score = 43.1 bits (100), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 63/311 (20%), Positives = 121/311 (38%), Gaps = 35/311 (11%)

Query: 334  FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
             A++P +       +   ++S+R+LP++L ++ +V R E        +R R F   + H 
Sbjct: 1214 IAVRPTSETVMYPAYAKWVQSHRDLPIKLNQWCNVVRWE-FKHPQPFLRTREFLWQEGHT 1272

Query: 394  -FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWD-DAENIMKGV 451
             F TKE+   E L+I +L   +Y++     ++    T  EK  G D     +A     G 
Sbjct: 1273 AFATKEEAAEEVLQILDLYARVYEELMAIPVVKGRKTEKEKFAGGDYTTTVEAFISASGR 1332

Query: 452  LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
               +  +       G+  G  A   P               C       +L   F+  + 
Sbjct: 1333 AIQVPGAPPSGAPEGLWWGAAADEAPAL-------------CPQGATSHHLGQNFSKMFE 1379

Query: 512  NSHSEKCHP---VMIHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIV--TTITS 562
                +   P    +  +  +G   R IG++      N  L L P    +Q ++    IT+
Sbjct: 1380 IVFEDPKKPGEKQLAFQNSWGITTRTIGVLTMVHGDNKGLVLPPRVACLQVVIIPCGITA 1439

Query: 563  SAVEYAQEI--------ANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKE 613
            S  E  ++          + L+   + +++D R N +  +K     +K +P+ +  G K+
Sbjct: 1440 SLPEADRQALLAQCAKYQDHLQRAGVRVKSDLRDNYSPGWKFNHWELKGVPVRLEVGPKD 1499

Query: 614  ASERS-IGIRR 623
              +R  + +RR
Sbjct: 1500 LQQRQCVAVRR 1510


>gi|325661656|ref|ZP_08150280.1| alanyl-tRNA synthetase 1 [Lachnospiraceae bacterium 4_1_37FAA]
 gi|325472183|gb|EGC75397.1| alanyl-tRNA synthetase 1 [Lachnospiraceae bacterium 4_1_37FAA]
          Length = 879

 Score = 43.1 bits (100), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 31/130 (23%), Positives = 63/130 (48%), Gaps = 20/130 (15%)

Query: 75  HSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++ +A++++    V+     +  D   +DF      + +E+  +E  + E IA++
Sbjct: 566 HSATHLLQKALKTVLGSHVEQKGSLVTPDRLRFDFAHFSAMTKEEIEAVEALVNEEIAKN 625

Query: 134 SPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWF-DLCRGPH 187
           +P + + ++ E+A++     LF  K E             E+V +   G++  +LC G H
Sbjct: 626 NPVVTEVMNVEEAKKTGAMALFGEKYE-------------EDVRVVTMGDFSKELCGGTH 672

Query: 188 VRSTGQVKKF 197
           V +TG +  F
Sbjct: 673 VSNTGLITTF 682


>gi|313157475|gb|EFR56894.1| alanine--tRNA ligase [Alistipes sp. HGB5]
          Length = 873

 Score = 43.1 bits (100), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 32/135 (23%), Positives = 59/135 (43%), Gaps = 9/135 (6%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKM 126
           R  A   H+  H+M EA++ +  + V+     +  +   +DF   Q  +  EL ++E  +
Sbjct: 556 RQSAANNHTATHLMHEALRKVLGQHVEQKGSMVTPEVLRFDFSHFQKMTPQELREVEMLV 615

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGP 186
              +  + P        E+ RE  + + E     +L      + V + R G   +LC G 
Sbjct: 616 NRAVRANYPL-------EENREATKEEAEKCGAMMLFGEKYGDKVRMVRFGSSVELCGGT 668

Query: 187 HVRSTGQVKKFFKLM 201
           H  +TG +  FFK++
Sbjct: 669 HTSATGNI-GFFKIL 682


>gi|123967582|ref|YP_001008440.1| alanyl-tRNA synthetase [Prochlorococcus marinus str. AS9601]
 gi|205830182|sp|A2BNH2|SYA_PROMS RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|123197692|gb|ABM69333.1| Alanyl-tRNA synthetase [Prochlorococcus marinus str. AS9601]
          Length = 886

 Score = 43.1 bits (100), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 32/137 (23%), Positives = 63/137 (45%), Gaps = 20/137 (14%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKM 126
           R+ A   H+  H++  A++S+  E     G ++  +   +DF+   P S D++++IE  +
Sbjct: 557 RAKAAANHTATHLLQSALKSVINESVGQKGSLVAFNKLRFDFNSSNPISKDQISKIETLV 616

Query: 127 QEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEI-LESIPAKENVTLYRQGEWF 180
              I  +     + +S  +A E     +F    E Y  E+ + ++P          G   
Sbjct: 617 NSWIMENHSLEIKNMSKSEALEKGAVAMF---GEKYDDEVRVVNVP----------GVSM 663

Query: 181 DLCRGPHVRSTGQVKKF 197
           +LC G HV++T ++  F
Sbjct: 664 ELCGGTHVKTTSELGSF 680


>gi|46121741|ref|XP_385425.1| hypothetical protein FG05249.1 [Gibberella zeae PH-1]
          Length = 553

 Score = 43.1 bits (100), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 77/365 (21%), Positives = 149/365 (40%), Gaps = 62/365 (16%)

Query: 292 EEINTPQVLD-QHLWQQSGHWDSYRANMFAVKCADDTIKDLRT-FALKPMNCPGHVAVFN 349
           +E N P  L  + L ++  H + +   +  V  A D  KDL    A++P +       ++
Sbjct: 108 DETNFPMFLSSKSLEKEKDHVEGFAPELAWVTKAGD--KDLEVPVAVRPTSEAVMYPYYS 165

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIH 408
             ++S+R+LP+RL ++ SV R E   +    +R R F   + H    T+E    E L+I 
Sbjct: 166 KWIRSHRDLPLRLNQWNSVVRWEAKQTTP-FLRTREFLWQEGHTAHLTEELAGAEVLEIL 224

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
            L   +Y     EK++                   A  +++G     + +  ++      
Sbjct: 225 ELYAGVY-----EKLL-------------------AVPVVRG-----RKTENEKF----- 250

Query: 469 LGEGAFYGPKFE-YILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
              G +Y    E YI  +  GR  Q  T   +  N    F+    +   +  H + + + 
Sbjct: 251 --AGGYYTTTVEGYIPSN--GRGIQGATSHALGQNFSKMFDITVEDPQKQGSH-IHVWQN 305

Query: 527 VFGSIERFIGIMI---ENFKG-NLPLWLSPIQAIVTTITSSAV----------EYAQEIA 572
            +G   R IG+M+    + KG  LP  ++  Q ++  +  +            +  +EI 
Sbjct: 306 SWGLSTRVIGVMVMIHGDDKGLVLPPRVAKTQVVIVPVGINKKTTPEEKKKHEDQVEEIR 365

Query: 573 NLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
             LK   + +  D+R   T  +K  +  +K +P+ +  G K+A++  I   R  +    +
Sbjct: 366 ANLKKAGVRVTADWREGYTPAWKFNDWELKGVPLRVEFGPKDAAKGVISTARRDTGEKGE 425

Query: 632 VSLLD 636
           +++ D
Sbjct: 426 IAIAD 430


>gi|325916030|ref|ZP_08178320.1| alanyl-tRNA synthetase [Xanthomonas vesicatoria ATCC 35937]
 gi|325537706|gb|EGD09412.1| alanyl-tRNA synthetase [Xanthomonas vesicatoria ATCC 35937]
          Length = 882

 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 32/132 (24%), Positives = 59/132 (44%), Gaps = 10/132 (7%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKM 126
           R   ++ HS  H++  A++ +    VQ     +  D   +DF   QP S++ELA IE+K+
Sbjct: 563 RGKTILNHSATHLLHAALREVLGTHVQQKGSLVAPDRLRFDFSHFQPISAEELAVIERKV 622

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRG 185
              +  +       ++ ++A +        +    L      E+V + + G +  +LC G
Sbjct: 623 NAEVRTNHSVEVHNMAMQEALD--------FGAMALFGEKYGEHVRVLKMGGYSTELCGG 674

Query: 186 PHVRSTGQVKKF 197
            HV  TG +  F
Sbjct: 675 THVSRTGDIGLF 686


>gi|297568237|ref|YP_003689581.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfurivibrio alkaliphilus
           AHT2]
 gi|296924152|gb|ADH84962.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfurivibrio alkaliphilus
           AHT2]
          Length = 735

 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 1/61 (1%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEII 62
           DI +  P+G +K FP  +T  D A S+   +  +     ING++  L  P++ G  +EII
Sbjct: 402 DIYVLTPNGEVKGFPRGSTPVDFAYSVHTEVGNRCSGAKINGQIAPLRTPLKNGDVVEII 461

Query: 63  T 63
           T
Sbjct: 462 T 462


>gi|238061935|ref|ZP_04606644.1| prolyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
 gi|237883746|gb|EEP72574.1| prolyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
          Length = 582

 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 44/194 (22%), Positives = 78/194 (40%), Gaps = 15/194 (7%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   HR L R     +I     G   W   G  +   +   +R ++     +E++ P 
Sbjct: 12  DAEVPSHRLLLRAG---YIRRAAPGGYTWLPLGKLVLDRVTDVVRGEMTAIGDQEVHFPA 68

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT--FALKPMNCPGHVAVFNHGLKSYR 356
           +L    ++ SG W  Y  ++F       T+ D R     L P +      +      SYR
Sbjct: 69  LLPAEPYRTSGRWTEYGDDIF-------TLADRRGAEHLLAPTHEELAALLVKDLFTSYR 121

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS-IY 415
           + PV L +  + +R+E +    GL+R R F   DA+ F   +       + H      I+
Sbjct: 122 DFPVTLFQVQTKFRDE-ARPRAGLLRGREFLMKDAYSFDLDDAGLTAAYERHRAAYQRIF 180

Query: 416 KDFGFEKIMVKLST 429
              G E  +V+ ++
Sbjct: 181 DQLGLEYAVVRATS 194


>gi|332969140|gb|EGK08172.1| alanine--tRNA ligase [Kingella kingae ATCC 23330]
          Length = 900

 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 61/138 (44%), Gaps = 21/138 (15%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY-YDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H+M +A++ +  E     G +       +D    Q  ++DE+AQIE+K+   I  +
Sbjct: 589 HSVTHLMHKALRDVLGEHVEQKGSLQNAELTRFDISHNQAITADEIAQIERKVNAAIIAN 648

Query: 134 SPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPH 187
            P   + +S E A++     LF  K   +             V +   GE+  +LC G H
Sbjct: 649 VPVKVETMSIEDAQKSGAMMLFGEKYGDF-------------VRVVTMGEYSTELCGGTH 695

Query: 188 VRSTGQVKKFFKLMKVAG 205
           V  TG +   FK++   G
Sbjct: 696 VARTGDI-GLFKIISEGG 712


>gi|222528548|ref|YP_002572430.1| AAA ATPase [Caldicellulosiruptor bescii DSM 6725]
 gi|222455395|gb|ACM59657.1| AAA ATPase [Caldicellulosiruptor bescii DSM 6725]
          Length = 554

 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 44/199 (22%), Positives = 94/199 (47%), Gaps = 13/199 (6%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISR---SLAKKAVAVAINGKVCDLSDPV-REGSIE 60
           +K+ F D ++  +     G+++   + R         VA  ++ ++ +L   + R+  ++
Sbjct: 8   VKVFFEDANV--YEDVEVGTNLLSFVPRFESYFKSSIVAAKVDNEIKELKYVIHRDCKVK 65

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            I       + + R S   ++  A + ++ E  V +   +  G Y + +  +  +++++ 
Sbjct: 66  FIDMTQEDGMRIYRRSLIFVLIVATRMLFKET-VNVQHSLSKGLYCEIENRK-LTAEDIN 123

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN--VTLYRQGE 178
            I++KM+ I+ +D  F ++ +S + A +LFE K    K     +I   EN  V +Y  G+
Sbjct: 124 LIKQKMKWIVDQDFQFRREKVSKDDAVKLFEEKGFYDKA---RTIKFSENDYVYIYYCGD 180

Query: 179 WFDLCRGPHVRSTGQVKKF 197
           + D   G  V STG +K F
Sbjct: 181 YVDYFYGHLVPSTGYLKIF 199


>gi|167570231|ref|ZP_02363105.1| alanyl-tRNA synthetase [Burkholderia oklahomensis C6786]
          Length = 874

 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 33/137 (24%), Positives = 67/137 (48%), Gaps = 20/137 (14%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H+M +A++ +        G +++ D   +DF    P + DE+ ++E  + E +  +
Sbjct: 564 HSATHLMHKALRDVLGSHVQQKGSLVDADKTRFDFAHNAPLTDDEIRRVEAIVNEQVLAN 623

Query: 134 SPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           +P + + + +++A +     LF+ +K   +V +L+   ++E            LC G HV
Sbjct: 624 APGIVRVMPYDEAVKGGAMALFD-EKYGDEVRVLDLGFSRE------------LCGGTHV 670

Query: 189 RSTGQVKKFFKLMKVAG 205
             TG +  FFK++   G
Sbjct: 671 HRTGDI-GFFKIVAEGG 686


>gi|168335368|ref|ZP_02693462.1| phosphoribulokinase/uridine kinase [Epulopiscium sp. 'N.t.
           morphotype B']
          Length = 528

 Score = 42.7 bits (99), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 36/151 (23%), Positives = 69/151 (45%), Gaps = 2/151 (1%)

Query: 47  VCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYY 106
           + +L + + E ++  I   D   + +   +C  +M  A + ++ E QV I   +  G++ 
Sbjct: 26  LIELGNKIDELNVTPIYLTDKDGMRIFERTCTFLMIVATKLLFNE-QVIINHHMSGGYFG 84

Query: 107 DFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIP 166
           +F       S  +  I++KM E+I  D P  K+ +   KA + FE+     K E+++   
Sbjct: 85  EFVNLDFNVSKNIGAIKEKMLELIEADLPIEKEVVLVGKAIDFFENTGMIDKSELIKY-R 143

Query: 167 AKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
               +  Y+  +  D   G  + STG +K F
Sbjct: 144 RTSTINTYKLEDVQDYFYGYMLPSTGCIKLF 174


>gi|294083659|ref|YP_003550416.1| alanyl-tRNA synthetase [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292663231|gb|ADE38332.1| alanyl-tRNA synthetase [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 879

 Score = 42.7 bits (99), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 36/140 (25%), Positives = 58/140 (41%), Gaps = 5/140 (3%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++ EA++ +  E     G ++  D   +DF   +  + DELA+++  +   +  +
Sbjct: 563 HSATHLLHEALREVLGEHVAQKGSMVGPDRLRFDFSHPKAMTEDELARVQAIVNSRVQMN 622

Query: 134 SPFLKQYLSHEKAREL--FESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRST 191
           S    + ++ E A EL       E Y  E+       E     R     +LC G HV  T
Sbjct: 623 SDVSTRIMTPEAAIELGALALFGEKYGDEVRVVQMGGETDIKGRSAWSVELCGGTHVNRT 682

Query: 192 GQVK--KFFKLMKVAGAYWR 209
           G +   K      VAG   R
Sbjct: 683 GDISILKVIGESAVAGGVRR 702


>gi|197294712|ref|YP_001799253.1| prolyl-tRNA synthetase [Candidatus Phytoplasma australiense]
 gi|259511611|sp|B1VAN9|SYP_PHYAS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|171854039|emb|CAM12012.1| Prolyl-tRNA synthetase [Candidatus Phytoplasma australiense]
          Length = 474

 Score = 42.7 bits (99), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 71/375 (18%), Positives = 149/375 (39%), Gaps = 62/375 (16%)

Query: 261 DGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQ-QSGHWDSY--RA 316
           D  G I +   G+ +++ +  Y+  +  K  ++ +  P V  + L+Q +  H   +   A
Sbjct: 35  DVKGFIIYLPYGYALWENIQKYLNYEFQKTGHQNVYFPLVFSEKLFQKEKDHIQGFSPEA 94

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M       +  + L    ++P +       +   + SYR+LP    +F +V R E +  
Sbjct: 95  AMITSTGQKELFEKL---VIRPTSEVLFSQYYAKIISSYRDLPKLYNQFCNVVRWEKATK 151

Query: 377 LHGLMRVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKL--STRPEK 433
               +R + F   + H V  T+++  ++ L      I +Y+  G E + +      + EK
Sbjct: 152 --PFLRGKEFLWQEGHTVHATEKEALDQTL----FAIQLYEKLGKELLALPFVCGRKTEK 205

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
              + AL          +  +I+   QD     +  G   + G  F              
Sbjct: 206 EKFAGAL----------ITYSIEALMQD--GQALQAGTSHYLGTNF-------------A 240

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLW 549
            + Q+ F      N +             +H+  +G   R IG +I     +    LP +
Sbjct: 241 QSFQIQFQDQDHQNKY-------------VHQTSWGVSTRLIGALIMVHSDDEGLILPPY 287

Query: 550 LSPIQAIVTTITSS---AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPII 606
           ++PIQ ++  +          A++I + LK+ +  +  D +N+T  +K  ++ +K +P+ 
Sbjct: 288 IAPIQIVIIPLQPKNELVQAEAKKIFDDLKTTY-RVHLDLQNKTPGWKFSQYELKGVPLR 346

Query: 607 IICGDKEASERSIGI 621
           I  G ++ ++  + I
Sbjct: 347 IEIGARDLAQGEVTI 361


>gi|315635122|ref|ZP_07890400.1| alanine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
 gi|315476084|gb|EFU66838.1| alanine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
          Length = 874

 Score = 42.7 bits (99), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 30/142 (21%), Positives = 61/142 (42%), Gaps = 10/142 (7%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY-YDFDKEQPFSS 116
           S+  +  +  R    + HS  H++  A++ +  E     G ++ D    +DF + +  S 
Sbjct: 546 SVNAVVDDVRRQRISLNHSATHLLHAALRQVLGEHVAQKGSLVSDTLLRFDFAQHEAISK 605

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
            +LA++E+ + + +  ++P     +  E A+        A     L      E V +   
Sbjct: 606 AQLAEVERIVNQQVRANNPIQTDIMELEAAK--------AKGAMALFGEKYSEQVRVLTM 657

Query: 177 GEW-FDLCRGPHVRSTGQVKKF 197
           G++  +LC G H + TG +  F
Sbjct: 658 GDFSIELCGGIHAKRTGDIGLF 679


>gi|312623151|ref|YP_004024764.1| AAA atpase [Caldicellulosiruptor kronotskyensis 2002]
 gi|312203618|gb|ADQ46945.1| AAA ATPase [Caldicellulosiruptor kronotskyensis 2002]
          Length = 554

 Score = 42.7 bits (99), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 39/162 (24%), Positives = 80/162 (49%), Gaps = 8/162 (4%)

Query: 39  VAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIG 97
           VA  ++ ++ +L   + R+  ++ I       + + R S   ++  A + ++ E  V + 
Sbjct: 43  VAAKVDNEIKELKYVIHRDCKVKFIDMTQEDGMRIYRRSLIFVLIVATRMLFKET-VNVQ 101

Query: 98  PIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAY 157
             +  G Y + +  +  +++++  I++KM+ I+ +D  F ++ +S + A +LFE K    
Sbjct: 102 HSLSKGLYCEIENRK-LTAEDINLIKQKMKWIVDQDFQFRREKVSKDDAVKLFEEKGFYD 160

Query: 158 KVEILESIPAKEN--VTLYRQGEWFDLCRGPHVRSTGQVKKF 197
           K     +I   EN  V +Y  G++ D   G  V STG +K F
Sbjct: 161 KA---RTIKFSENDYVYIYYCGDYVDYFYGHLVPSTGYLKIF 199


>gi|237748703|ref|ZP_04579183.1| alanyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
 gi|229380065|gb|EEO30156.1| alanyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
          Length = 877

 Score = 42.7 bits (99), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 33/139 (23%), Positives = 62/139 (44%), Gaps = 10/139 (7%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKM 126
           R+  +  HS  H+M +A++ +        G +++ +   +DF    P + DE+ Q+E+ +
Sbjct: 559 RAQTMRNHSVTHLMHKALRQVLGSHVAQRGSLVDPEKTRFDFSHNAPITDDEIRQVEEIV 618

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGP 186
              I  ++P     +S ++A         A+    L      + V +   G   +LC G 
Sbjct: 619 NREIVANNPTETHQMSFDEAI--------AHGATALFGEKYGDVVRVLDIGFSCELCGGT 670

Query: 187 HVRSTGQVKKFFKLMKVAG 205
           HV  TG +  FFK++   G
Sbjct: 671 HVSRTGDI-GFFKVVSEGG 688


>gi|78778430|ref|YP_396542.1| alanyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312]
 gi|123554842|sp|Q31DD9|SYA_PROM9 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|78711929|gb|ABB49106.1| alanyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312]
          Length = 886

 Score = 42.7 bits (99), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 32/137 (23%), Positives = 63/137 (45%), Gaps = 20/137 (14%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKM 126
           R+ A   H+  H++  A++S+  E     G ++  +   +DF+   P S D++++IE  +
Sbjct: 557 RAKAAANHTATHLLQSALKSVVNESVGQKGSLVAFNKLRFDFNSSNPISKDQISKIETLV 616

Query: 127 QEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEI-LESIPAKENVTLYRQGEWF 180
              I  +     + +S  +A E     +F    E Y  E+ + ++P          G   
Sbjct: 617 NSWIMENHALEIKNMSKSEALEKGAVAMF---GEKYDDEVRVVNVP----------GVSM 663

Query: 181 DLCRGPHVRSTGQVKKF 197
           +LC G HV++T ++  F
Sbjct: 664 ELCGGTHVKTTSELGSF 680


>gi|281412824|ref|YP_003346903.1| alanyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
 gi|281373927|gb|ADA67489.1| alanyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
          Length = 863

 Score = 42.7 bits (99), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 39/155 (25%), Positives = 68/155 (43%), Gaps = 19/155 (12%)

Query: 50  LSDPVREGSIEIITPEDPRSLAVIR-HSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYD 107
           L   +R G   ++  +  R  + +R H+  H++  A++ +  + V+ A   +  D   +D
Sbjct: 535 LDGTLRRGQKVVLRVDKKRRESTMRNHTATHLLHAALKKVLGDHVRQAGSLVAPDRLRFD 594

Query: 108 FDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEIL 162
           F   +  SS E+ Q+E  + E I    P   +Y S+E+A +     LF  K       + 
Sbjct: 595 FTHFKGLSSSEIEQVEDLVNEWIMEAIPVEVRYTSYEEAVKSGVVALFTEKYGDVVRVVE 654

Query: 163 ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
               +KE            LC G HV++TGQ+  F
Sbjct: 655 VPGVSKE------------LCGGTHVKNTGQIGLF 677


>gi|255320540|ref|ZP_05361720.1| prolyl-tRNA synthetase [Acinetobacter radioresistens SK82]
 gi|262379097|ref|ZP_06072253.1| prolyl-tRNA synthetase [Acinetobacter radioresistens SH164]
 gi|255302390|gb|EET81627.1| prolyl-tRNA synthetase [Acinetobacter radioresistens SK82]
 gi|262298554|gb|EEY86467.1| prolyl-tRNA synthetase [Acinetobacter radioresistens SH164]
          Length = 571

 Score = 42.7 bits (99), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 32/146 (21%), Positives = 60/146 (41%), Gaps = 7/146 (4%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG+  W   G ++   + + +R ++ +    E   P      LW++SG +  Y   +   
Sbjct: 37  SGLYTWLPMGVRVLNKVEAIVREEMNRAGALETFMPVTQPASLWEESGRYVQYGPELLRF 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
                  +    F L P +      +  + LKSY++LP+   +  + +R+E      G+M
Sbjct: 97  ND-----RHTNPFVLGPTHEEVITDLARNELKSYKQLPINFYQIQTKFRDEVRPRF-GVM 150

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLKI 407
           R R F   DA+ F   +    E   +
Sbjct: 151 RSREFIMKDAYSFHVDQASLQETYDV 176


>gi|332184146|gb|AEE26400.1| Alanyl-tRNA synthetase [Francisella cf. novicida 3523]
          Length = 865

 Score = 42.7 bits (99), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 35/145 (24%), Positives = 63/145 (43%), Gaps = 11/145 (7%)

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFSSDELAQ 121
             + PR      HS  H++ +A++ I        G ++ E+   +DF  ++  S  E+ Q
Sbjct: 542 VSDQPRLATAANHSATHLLHKALKVILGSHAEQKGSLVDENRLRFDFTHDKAISRSEIEQ 601

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-F 180
           IE  + + I  + P      S +KA+ L          + L      + V +   G++  
Sbjct: 602 IELLVNQQIRANYPVATIETSQQKAKSL--------GAQALFGEKYGDIVRVISMGDFSI 653

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAG 205
           +LC G HV  TG +   FK++  +G
Sbjct: 654 ELCGGTHVAYTGDI-GLFKIISESG 677


>gi|328861737|gb|EGG10840.1| hypothetical protein MELLADRAFT_42095 [Melampsora larici-populina
           98AG31]
          Length = 486

 Score = 42.7 bits (99), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 33/132 (25%), Positives = 54/132 (40%), Gaps = 18/132 (13%)

Query: 273 WKIFQTLISYMRRK---IKDDYEEINTPQVLDQHL-----WQQSGHWDSYRANMFAVKCA 324
           W      I  +++    ++++ E I   +V   HL     W+ SG W++    +F +   
Sbjct: 72  WNFLPNAIRVLKKVEDIVREEMERIGASEVSLSHLQTSSLWKASGRWNTAGKELFRLSDR 131

Query: 325 DDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE--PSGSLHGLMR 382
            D         L P +      +    + S ++LPVRL   G  YR+E  P     GL+R
Sbjct: 132 KDA-----HLLLAPTHEEEITQLVKLDVNSSKQLPVRLFHIGRKYRDELRPRA---GLLR 183

Query: 383 VRGFTQDDAHVF 394
            R F   D + F
Sbjct: 184 SREFIMKDLYTF 195


>gi|25028444|ref|NP_738498.1| prolyl-tRNA synthetase [Corynebacterium efficiens YS-314]
 gi|259507503|ref|ZP_05750403.1| proline--tRNA ligase [Corynebacterium efficiens YS-314]
 gi|81846817|sp|Q8FP97|SYP_COREF RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|23493729|dbj|BAC18698.1| putative prolyl-tRNA synthetase [Corynebacterium efficiens YS-314]
 gi|259164888|gb|EEW49442.1| proline--tRNA ligase [Corynebacterium efficiens YS-314]
          Length = 588

 Score = 42.7 bits (99), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 41/192 (21%), Positives = 80/192 (41%), Gaps = 11/192 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +  +A    GV  W   G +  + +   +R ++     +E+  P 
Sbjct: 19  DAEVPSHKLLVRAGYIRRVA---PGVYSWLPLGLRALRNIEQVVREEMDAIGGQELLFPG 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++ +  W  Y  ++F +K  D    D   + L P +     +       SY++ 
Sbjct: 76  LLPREPYETTQRWTEYGDSLFRLK--DRKGAD---YLLGPTHEEMFASTVKDLYSSYKDF 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS-IYKD 417
           PV L +  + YR+E      G++R R F   D++ F   +    E    H      I+  
Sbjct: 131 PVTLYQIQTKYRDEER-PRAGILRGREFVMKDSYSFDMTDAGLEESYARHRAAYQRIFDR 189

Query: 418 FGFEKIMVKLST 429
            G E ++ K ++
Sbjct: 190 LGIEYVICKATS 201


>gi|238921100|ref|YP_002934615.1| alanyl-tRNA synthetase, [Edwardsiella ictaluri 93-146]
 gi|238870669|gb|ACR70380.1| alanyl-tRNA synthetase, putative [Edwardsiella ictaluri 93-146]
          Length = 875

 Score = 42.7 bits (99), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 55/130 (42%), Gaps = 20/130 (15%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H+M  A++S+  E     G ++ DG   +DF   +     ++ Q+E  +   I R+
Sbjct: 564 HSATHLMHAALRSVLGEHVAQKGSLVSDGALRFDFSHAEAMKPRQIRQVEDIVNAQIRRN 623

Query: 134 SPFLKQYLSHEKAR-----ELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPH 187
            P   Q +  E+A+      LF  K +A              V +   G++  +LC G H
Sbjct: 624 LPIDTQEMGLEEAKAKGAMALFGEKYDA-------------QVRVLSMGDFSTELCGGTH 670

Query: 188 VRSTGQVKKF 197
              TG +  F
Sbjct: 671 AERTGDIGLF 680


>gi|224418366|ref|ZP_03656372.1| alanyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|253827685|ref|ZP_04870570.1| alanyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|313141896|ref|ZP_07804089.1| alanyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|253511091|gb|EES89750.1| alanyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|313130927|gb|EFR48544.1| alanyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
          Length = 853

 Score = 42.7 bits (99), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 31/130 (23%), Positives = 58/130 (44%), Gaps = 19/130 (14%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++ +A++ +  +     G ++E     +DF   +  S +EL ++E  + E I + 
Sbjct: 560 HSATHLLHKALREVLGDHITQAGSLVESNRLRFDFSHPKALSYEELNKVELLVNEKILKA 619

Query: 134 SPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           +P + + +  E A+      LF  K               ENV +   G+  +LC G HV
Sbjct: 620 NPQICEVMGIEAAKSKGAMALFGEK-------------YGENVRVISFGDSIELCGGIHV 666

Query: 189 RSTGQVKKFF 198
            +T  +  F+
Sbjct: 667 ENTANIGSFY 676


>gi|330464914|ref|YP_004402657.1| prolyl-tRNA synthetase [Verrucosispora maris AB-18-032]
 gi|328807885|gb|AEB42057.1| prolyl-tRNA synthetase [Verrucosispora maris AB-18-032]
          Length = 583

 Score = 42.7 bits (99), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 45/190 (23%), Positives = 76/190 (40%), Gaps = 15/190 (7%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   HR L R   L   A  G     W   G  +   +   +R ++     +E++ P 
Sbjct: 19  DAEVPSHRLLLRAGYLRRAAPGG---YTWLPLGKLVLDRVSEIVRAEMAAIGGQEVHFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT--FALKPMNCPGHVAVFNHGLKSYR 356
           +L    ++ SG W  Y  ++F       T+ D R     L P +      +      SYR
Sbjct: 76  LLPAEPYRTSGRWTEYGDDIF-------TLADRRGAEHLLAPTHEEMAALLVKELFTSYR 128

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS-IY 415
           +LPV L +  + +R+E +    GL+R R F   DA+ F   ++        H      I+
Sbjct: 129 DLPVTLFQIQTKFRDE-ARPRAGLLRGREFLMKDAYSFDLDDEGLRAAYGRHRAAYQKIF 187

Query: 416 KDFGFEKIMV 425
              G +  +V
Sbjct: 188 DRLGLDYTVV 197


>gi|317495744|ref|ZP_07954109.1| prolyl-tRNA synthetase [Gemella moribillum M424]
 gi|316914197|gb|EFV35678.1| prolyl-tRNA synthetase [Gemella moribillum M424]
          Length = 566

 Score = 42.7 bits (99), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 37/154 (24%), Positives = 71/154 (46%), Gaps = 12/154 (7%)

Query: 279 LISYMRRKIKDDYEEINTPQVL-----DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           +I  + R I++++++I   ++L      +  W++SG W  Y+     ++  D   +    
Sbjct: 49  VIQNIERVIREEHDKIGAVELLMPLLQSEDYWKESGRW--YKMGDELMRLKD---RKGAG 103

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
           +AL P          N+ L SY++LP+ L +  + +R+E    L GL+R + F   D + 
Sbjct: 104 YALSPTAEEIICQTVNNMLTSYKQLPMNLYQIQTKFRDEMRPRL-GLLRGKEFIMKDGYS 162

Query: 394 FCTKEQMFNEC-LKIHNLIISIYKDFGFEKIMVK 426
           F    +   E  L  +N   +I+  F  +   VK
Sbjct: 163 FHDSPESLRETYLDYYNAYSNIFDRFELKYRAVK 196


>gi|269792970|ref|YP_003317874.1| AAA ATPase [Thermanaerovibrio acidaminovorans DSM 6589]
 gi|269100605|gb|ACZ19592.1| AAA ATPase [Thermanaerovibrio acidaminovorans DSM 6589]
          Length = 547

 Score = 42.7 bits (99), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 40/177 (22%), Positives = 81/177 (45%), Gaps = 4/177 (2%)

Query: 22  TGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSCAHI 80
           TG+++       +A + VA  +N  +  LS  +   S +E +       + V R + + +
Sbjct: 20  TGAELLSLAKAEMAHQVVACRVNHYLRPLSWVIDGASDVEFVDTGSFEGMEVYRRTLSFL 79

Query: 81  MAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQY 140
           +  A +    +  V I   + DG+Y +    +  S  ++  I  +M+ +I  + P  ++ 
Sbjct: 80  LVMASKRALGQ-DVIIRHSMSDGYYCELVGGEA-SQGDVEAIRGEMKRLIDLNIPINREV 137

Query: 141 LSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
           L  ++A+ +FE +    K  +L+   A + V +YR  + +     P   +TGQVK F
Sbjct: 138 LPLDRAKGIFERQGNLDKARLLKWT-AMDPVVVYRCADTYGYFYAPLASNTGQVKVF 193


>gi|209549551|ref|YP_002281468.1| alanyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|209535307|gb|ACI55242.1| alanyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 884

 Score = 42.7 bits (99), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 90/205 (43%), Gaps = 24/205 (11%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKM 126
           RS     HS  H++ EA++ +        G ++  +   +D    +P S++EL  +E   
Sbjct: 555 RSRLRANHSATHLLHEALREVLGTHVAQKGSLVAPERLRFDVSHPKPMSAEELKIVEDMA 614

Query: 127 QEIIARDSPFLKQYLS-----HEKARELFESK--KEAYKVEILESIPAKENVTLYRQGEW 179
            EI+ ++S    + +S      E A  LF  K   E   V +   +   ++   Y     
Sbjct: 615 NEIVLQNSAVTTRLMSVDDAIEEGAMALFGEKYGDEVRVVSMGTGVHGAKSNKPYS---- 670

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVA-GAYWR------GDSNRPMLS----RIYGTAWNTQ 228
            +LC G HV +TGQ+     L + A GA  R      G+S R  L+    R+   A + +
Sbjct: 671 VELCGGTHVSATGQIGLIRVLGESAVGAGVRRIEAVTGESAREYLAEQDDRVKTLAASLK 730

Query: 229 QELTQYLYFLEESEKRDHRKLAREM 253
            + ++ L  + E+   + RKL +E+
Sbjct: 731 VQPSEVLSRV-EALMDERRKLEKEL 754


>gi|331084749|ref|ZP_08333837.1| alanyl-tRNA synthetase 1 [Lachnospiraceae bacterium 9_1_43BFAA]
 gi|330410843|gb|EGG90265.1| alanyl-tRNA synthetase 1 [Lachnospiraceae bacterium 9_1_43BFAA]
          Length = 879

 Score = 42.7 bits (99), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 31/130 (23%), Positives = 63/130 (48%), Gaps = 20/130 (15%)

Query: 75  HSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++ +A++++    V+     +  D   +DF      + +E+  +E  + E IA++
Sbjct: 566 HSATHLLQKALKTVLGSHVEQKGSLVTPDRLRFDFAHFSAMTREEIEAVEALVNEEIAKN 625

Query: 134 SPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWF-DLCRGPH 187
           +P + + ++ E+A++     LF  K E             E+V +   G++  +LC G H
Sbjct: 626 NPVVTEVMNVEEAKKTGAMALFGEKYE-------------EDVRVVTMGDFSKELCGGTH 672

Query: 188 VRSTGQVKKF 197
           V +TG +  F
Sbjct: 673 VSNTGLITTF 682


>gi|319404395|emb|CBI77998.1| Alanyl-tRNA synthetase [Bartonella rochalimae ATCC BAA-1498]
          Length = 887

 Score = 42.7 bits (99), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 35/143 (24%), Positives = 64/143 (44%), Gaps = 10/143 (6%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSD 117
           +E+    + R      HS  H++ EA++ I  P +      +      +DF   +P SS+
Sbjct: 548 VELSVDSERRRKIRANHSATHLLHEALRCILGPHIAQKGSLVSPSRLRFDFSHPKPISSE 607

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEK-----ARELFESKKEAYKVEILESIPAKENVT 172
           EL ++E    +I+ ++S    + ++ +      A  LF  +K   +V ++      E   
Sbjct: 608 ELKRVEDLANDIVLQNSKVTTRLMALDDAILGGAMALF-GEKYGDEVRVVSMGERCEPTE 666

Query: 173 LYRQGEW-FDLCRGPHVRSTGQV 194
           L R   W  +LC G HV+ TG +
Sbjct: 667 LTRH--WSIELCGGTHVQRTGDI 687


>gi|298385691|ref|ZP_06995249.1| proline--tRNA ligase [Bacteroides sp. 1_1_14]
 gi|298261832|gb|EFI04698.1| proline--tRNA ligase [Bacteroides sp. 1_1_14]
          Length = 497

 Score = 42.7 bits (99), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 63/300 (21%), Positives = 128/300 (42%), Gaps = 56/300 (18%)

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECL 405
            + + ++SYR+LP+   ++ +V+R E    L   +R   F   + H    T+E+   E +
Sbjct: 134 TYKNWIQSYRDLPILCNQWANVFRWEMRTRL--FLRTAEFLWQEGHTAHATREEAEEEAI 191

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
           ++ N    +Y +F  EK M                   A  ++KGV      S+ +R   
Sbjct: 192 RMLN----VYSEFA-EKYM-------------------AVPVVKGV-----KSANERF-- 220

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIH 524
                 GA      E +++D  G+  Q GT   +  N    F+  +VN  ++  +   + 
Sbjct: 221 -----AGALDTYTIEAMMQD--GKALQSGTSHFLGQNFAKAFDVQFVNKENKMEY---VW 270

Query: 525 RAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTITSSAVEYAQEIANL------ 574
              +G   R +G +I     +    LP  L+PIQ ++  I  +  +  Q  A +      
Sbjct: 271 ATSWGVSTRLMGALIMTHSDDNGLVLPPHLAPIQVVIVPIYKNDEQLKQIDAKVEGIVAK 330

Query: 575 LKSHHLSIETD-FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
           LK+  +S++ D   N+   +K  ++ +K +P+ ++ G ++    ++ + R  +   + V+
Sbjct: 331 LKALGISVKYDNADNKRPGFKFADYELKGVPVRLVMGGRDLENNTMEVMRRDTLEKETVT 390


>gi|171779579|ref|ZP_02920535.1| hypothetical protein STRINF_01416 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171281681|gb|EDT47115.1| hypothetical protein STRINF_01416 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 872

 Score = 42.7 bits (99), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 39/154 (25%), Positives = 72/154 (46%), Gaps = 15/154 (9%)

Query: 68  RSLAVIR-HSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY-YDFDKEQPFSSDELAQIEKK 125
           R  +VI+ H+  H++  A+  +  E     G + E+GF  +DF   +  ++DEL QIE++
Sbjct: 559 RRHSVIKNHTATHLLHAALHHVIGEHATQAGSLNEEGFLRFDFTHFEAVTADELRQIEEE 618

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCR 184
           + + I    P +      + A+ +        K          +NV +   G++  +LC 
Sbjct: 619 VNQQIWNAIPVITVETDIDTAKSMGAMALFGEKY--------GKNVRVVTIGDYSIELCG 670

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLS 218
           G HV +T ++   FK++K  G    G   R +L+
Sbjct: 671 GTHVSNTAEI-GIFKIVKEEGI---GSGTRRILA 700


>gi|312136460|ref|YP_004003797.1| glycyl-tRNA synthetase [Methanothermus fervidus DSM 2088]
 gi|311224179|gb|ADP77035.1| glycyl-tRNA synthetase [Methanothermus fervidus DSM 2088]
          Length = 591

 Score = 42.7 bits (99), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 77/199 (38%), Gaps = 60/199 (30%)

Query: 256 FHIAEDGSGVIFWHRKGWKIFQTLISYMRR--KIKDDYEEINTPQVLDQHLWQQSGHWDS 313
           F I E  SG   +   G  + + +I   R    IK+ + E+ TP V+ + + + SGH D 
Sbjct: 27  FEIYEGLSGFYDYGPLGVLLKRKIIEKWREYYTIKEGFYEVETPNVMPKEVLKASGHVDH 86

Query: 314 YRANMFAVK-C-----ADDTIKD--------------LRTFALKPMNCP---GHVA---- 346
           +   M   K C     AD  IKD                  + K + CP   GH++    
Sbjct: 87  FNDPMTKCKDCSEIYRADHLIKDETGEDVEGLSNEKLTEIISKKKIRCPKCGGHLSHVWS 146

Query: 347 -----------------------------VFNHGLKSYR-ELPVRLAEFGSVYRNEPSGS 376
                                        +F   ++ YR +LP  + + G  +RNE S  
Sbjct: 147 YNLMFQTLIGPTGKKVGYLRPETAQGIFVLFKRLMRFYRNKLPFGVVQIGKSFRNEISPR 206

Query: 377 LHGLMRVRGFTQDDAHVFC 395
             G++R+R FTQ +A +F 
Sbjct: 207 -QGVIRLREFTQAEAEIFV 224


>gi|152991270|ref|YP_001356992.1| alanyl-tRNA synthetase [Nitratiruptor sp. SB155-2]
 gi|205830162|sp|A6Q576|SYA_NITSB RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|151423131|dbj|BAF70635.1| alanyl-tRNA synthetase [Nitratiruptor sp. SB155-2]
          Length = 850

 Score = 42.7 bits (99), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 37/150 (24%), Positives = 75/150 (50%), Gaps = 19/150 (12%)

Query: 55  REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQP 113
           ++ ++E +  +  R +A   HS  HI+  A++ I  E     G ++E +   +DF   +P
Sbjct: 534 KDEAVEAVVDKSRREIAK-HHSATHILHSALRKILGEHVTQQGSLVEANRLRFDFSHPKP 592

Query: 114 FSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAK 168
            ++ E+ +IE  + E+IA+      + +  +KA+E     LF  +K    V ++E     
Sbjct: 593 LNAQEIERIENFVNEVIAQGIEAKVEEMPIDKAKEKGAMALF-GEKYGDVVRVVEF---- 647

Query: 169 ENVTLYRQGEWFDLCRGPHVRSTGQVKKFF 198
            +V++       +LC G HV+++ ++  FF
Sbjct: 648 GDVSV-------ELCGGTHVKNSAEIGSFF 670


>gi|315604524|ref|ZP_07879587.1| proline--tRNA ligase [Actinomyces sp. oral taxon 180 str. F0310]
 gi|315313536|gb|EFU61590.1| proline--tRNA ligase [Actinomyces sp. oral taxon 180 str. F0310]
          Length = 602

 Score = 42.7 bits (99), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 40/192 (20%), Positives = 77/192 (40%), Gaps = 18/192 (9%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R     +I     G+  W   G +  + +   +R ++     +E++ P 
Sbjct: 19  DAEVNSHKLLVRAG---YIRRTAPGIYTWLPLGLRTLRKIEDIVREEMDAMGAQEVHFPG 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++    ++ +  W+ Y   +F  K  D    D   + L P +      +      SY++L
Sbjct: 76  LIPAEPYKATNRWEEYGPTLF--KLEDRKGGD---YLLAPTHEEMFTLLVKDMFSSYKDL 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P  L +  + YR+E +    GL+R R F   DA+ F   E   +   +            
Sbjct: 131 PTTLYQIQTKYRDE-ARPRAGLIRGREFVMKDAYSFDVTEVGLDASYQAERDT------- 182

Query: 419 GFEKIMVKLSTR 430
            +E+I  +L  R
Sbjct: 183 -YERIFTRLGLR 193


>gi|45656657|ref|YP_000743.1| alanyl-tRNA synthetase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
 gi|48428508|sp|P61703|SYA_LEPIC RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|45599893|gb|AAS69380.1| alanyl-tRNA synthetase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
          Length = 977

 Score = 42.7 bits (99), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 60/128 (46%), Gaps = 14/128 (10%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY-YDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++  A++++  +  +  G I+   +  +DF      +S+E+ QIE  + E I ++
Sbjct: 618 HSGTHLLNGALRTLLGDHVLQKGSIVSPEYLRFDFSHPSSLTSEEIRQIESWVNESIRKN 677

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAK--ENVTLYRQGEW-FDLCRGPHVRS 190
            P   + LS E A+          K   + +   K  E V + + G+   + C G HV  
Sbjct: 678 FPVETKELSIEDAK----------KTGAVATFGEKYGERVRVVQMGDASIEFCGGTHVSR 727

Query: 191 TGQVKKFF 198
           TG++  FF
Sbjct: 728 TGEIGYFF 735


>gi|239616791|ref|YP_002940113.1| Phosphoribulokinase / Uridine kinase family protein [Kosmotoga
           olearia TBF 19.5.1]
 gi|239505622|gb|ACR79109.1| Phosphoribulokinase / Uridine kinase family protein [Kosmotoga
           olearia TBF 19.5.1]
          Length = 554

 Score = 42.7 bits (99), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 1/81 (1%)

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
           +EL +IE KM++I+ +D PF K+ +   +A ELF+  ++  K  +L     K  V +Y+ 
Sbjct: 117 EELEKIESKMRDIVEQDLPFSKETIDKFEAIELFKLDQQMEK-SLLFKYRKKSTVNIYKC 175

Query: 177 GEWFDLCRGPHVRSTGQVKKF 197
             +F+   G    STG +K F
Sbjct: 176 DNYFNYFYGYMPMSTGCLKHF 196


>gi|219669584|ref|YP_002460019.1| alanyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
 gi|219539844|gb|ACL21583.1| alanyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
          Length = 875

 Score = 42.7 bits (99), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 31/138 (22%), Positives = 60/138 (43%), Gaps = 10/138 (7%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSD 117
           +E +  E  R      HS  H++  A++++  E VQ A   +  D   +DF      +S 
Sbjct: 547 VEALVDEHLRLATARHHSATHLLQSALRAVLGEHVQQAGSLVTPDRLRFDFTHFSALTSA 606

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           EL ++E  + + +  + P   + +S + A+        A     L      + V +   G
Sbjct: 607 ELQRVEDLLNKAVLANMPVAAEEMSLDAAK--------ASGATALFGEKYGDTVRVVSMG 658

Query: 178 EW-FDLCRGPHVRSTGQV 194
           ++  +LC G H+ +TG +
Sbjct: 659 DYSLELCGGTHIHATGDI 676


>gi|307718489|ref|YP_003874021.1| alanyl-tRNA synthetase AlaRS [Spirochaeta thermophila DSM 6192]
 gi|306532214|gb|ADN01748.1| alanyl-tRNA synthetase AlaRS [Spirochaeta thermophila DSM 6192]
          Length = 603

 Score = 42.7 bits (99), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 29/130 (22%), Positives = 62/130 (47%), Gaps = 20/130 (15%)

Query: 75  HSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           H+  H++ +A++ +  P VQ     I  +   +DF   +  + +++ ++E+ + + I  D
Sbjct: 459 HTATHLLHQALRIVLGPHVQQKGSNITPERLRFDFSHPEKLTPEQIRKVEEIVNQKIKED 518

Query: 134 SPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWF-DLCRGPH 187
            P   + ++ E+A+E      F  + +             E V +Y  G++  ++C GPH
Sbjct: 519 LPVTMEVMTLEEAKEKGAIAFFTDRYD-------------EKVKVYSVGDFSKEVCGGPH 565

Query: 188 VRSTGQVKKF 197
           V  TG + +F
Sbjct: 566 VERTGVLGRF 575


>gi|66819737|ref|XP_643527.1| alanyl-tRNA synthetase [Dictyostelium discoideum AX4]
 gi|74860734|sp|Q86H43|SYAM_DICDI RecName: Full=Alanyl-tRNA synthetase, mitochondrial; AltName:
           Full=Alanine--tRNA ligase; Short=AlaRS
 gi|60471622|gb|EAL69578.1| alanyl-tRNA synthetase [Dictyostelium discoideum AX4]
          Length = 932

 Score = 42.7 bits (99), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 33/137 (24%), Positives = 66/137 (48%), Gaps = 19/137 (13%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFSSDELAQIEKKM 126
           R+   + HS  H++  A++++  +  V  G ++  +   +DF   Q  + +++ QIE+ +
Sbjct: 603 RNQVAVHHSATHLLHAALRNVIGKSVVQAGSLVGSESLRFDFTHGQKLTPNQIEQIEQWV 662

Query: 127 QEIIARDSPFLKQYLSHEKAR------ELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            + IA+D       + +E+A       +LF S+K +  V ++ SIP          G   
Sbjct: 663 NDAIAKDIALNTDEIPYEQASKNSDTLQLF-SEKYSELVRVV-SIP----------GFSK 710

Query: 181 DLCRGPHVRSTGQVKKF 197
           +LC G HV  +  + +F
Sbjct: 711 ELCGGTHVERSSSIHQF 727


>gi|153816280|ref|ZP_01968948.1| hypothetical protein RUMTOR_02529 [Ruminococcus torques ATCC 27756]
 gi|317502163|ref|ZP_07960339.1| proline-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|331088732|ref|ZP_08337642.1| prolyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA]
 gi|145846463|gb|EDK23381.1| hypothetical protein RUMTOR_02529 [Ruminococcus torques ATCC 27756]
 gi|316896439|gb|EFV18534.1| proline-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|330407255|gb|EGG86758.1| prolyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA]
          Length = 480

 Score = 42.7 bits (99), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 74/373 (19%), Positives = 141/373 (37%), Gaps = 59/373 (15%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHLWQ-QSGHWDSYRANMFAV 321
           G + +   G+ I++ + S + ++ KD   E +  P ++ + L Q +  H + +   +  V
Sbjct: 39  GCLNYLPNGYAIWENIQSDLDKRFKDTGVENVYLPVLIPESLLQKEKDHIEGFAPEVAWV 98

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
                     R F ++P +      V++  ++SYR+LP    ++ SV R E   +    +
Sbjct: 99  THGGAEPLQER-FCIRPTSETLFCDVWSKTVQSYRDLPKVWNQWCSVLRWEK--TTRPFL 155

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKL----STRPEKRVGS 437
           R R F   + H   T    + E  +   L+  +YKDF  E + + +     T  EK  G 
Sbjct: 156 RSREFLWQEGH---TIHATYEEAEERTKLMWKVYKDFVEENLAIPVVAGRKTESEKFAG- 211

Query: 438 DALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ 497
                                +QD      L+ +G        +   ++           
Sbjct: 212 ---------------------AQDTYTIEALMHDGQALQSATSHFFGNS----------- 239

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPI 553
                P  F+  Y + ++E  H V  +   +G   R IG +I    ++    LP  ++P+
Sbjct: 240 ----FPDAFDIKYADKNNE-LHSV--YETSWGLSTRIIGAIIMVHGDDSGLVLPPRIAPV 292

Query: 554 QAIVTTITS---SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           Q  V  I       ++ A E+ + L       + D   ++  +K  E  +  IP  I  G
Sbjct: 293 QTRVIPIAQHKEGVLDKANELLDALNKAGYRAKIDDSEKSPGWKFSEQEMLGIPTRIEIG 352

Query: 611 DKEASERSIGIRR 623
            K+     + + R
Sbjct: 353 PKDIENGQVVVVR 365


>gi|126725673|ref|ZP_01741515.1| prolyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150]
 gi|126704877|gb|EBA03968.1| prolyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150]
          Length = 470

 Score = 42.7 bits (99), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 44/214 (20%), Positives = 89/214 (41%), Gaps = 16/214 (7%)

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISY 282
           W     L++Y   + +    D + ++  + L    I +  +G+  W   G K+ + +   
Sbjct: 22  WGQFMRLSRYFLPVLKENPADAQIVSHRLMLRAGMIKQASAGIYSWLPLGLKVLRNIERI 81

Query: 283 M-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           +   + K  +  +  P V    LW++SG +D Y   M  ++ +D    D+      P N 
Sbjct: 82  VHEEQAKAGHIPVLMPTVQSADLWRESGRYDDYGEEM--LRISDRHGHDM---LYGPTNE 136

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
                +F   + SY++LP+ L +    +R+E      G+MR R F   D + F      +
Sbjct: 137 EQITDIFRAHVHSYKDLPLTLYQIQWKFRDERRPRF-GVMRGREFLMKDGYNFDID---Y 192

Query: 402 NECLKIHN----LIISIYKDFGFEKIMVKLSTRP 431
           +  +  +N      +  Y+  G + I ++  + P
Sbjct: 193 DSAMHAYNRHMVAYLRTYERMGLKAIPMRADSGP 226


>gi|322421559|ref|YP_004200782.1| alanyl-tRNA synthetase [Geobacter sp. M18]
 gi|320127946|gb|ADW15506.1| alanyl-tRNA synthetase [Geobacter sp. M18]
          Length = 875

 Score = 42.7 bits (99), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 11/133 (8%)

Query: 75  HSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           H+  H++  A++ +  E V+ A   +  D   +DF    P +++E+ ++E  +   I  +
Sbjct: 568 HTATHLLQAALREVLGEHVKQAGSLVTPDRLRFDFTHFSPMTAEEMRRVEVLVNGHIMGN 627

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTG 192
           SP          ARE+  ++  A     L      + V + R G+   +LC G HV   G
Sbjct: 628 SPV--------DAREMPATEALAGGATALFGEKYGDIVRVVRVGDVSSELCGGTHVHGAG 679

Query: 193 QVKKFFKLMKVAG 205
           ++  FFK++  AG
Sbjct: 680 EI-GFFKILSEAG 691


>gi|167563044|ref|ZP_02355960.1| alanyl-tRNA synthetase [Burkholderia oklahomensis EO147]
          Length = 874

 Score = 42.7 bits (99), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 33/137 (24%), Positives = 66/137 (48%), Gaps = 20/137 (14%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H+M +A++ +        G +++ D   +DF    P + DE+ ++E  + E +  +
Sbjct: 564 HSATHLMHKALRDVLGSHVQQKGSLVDADKTRFDFAHNAPLTDDEIRRVEAIVNEQVLAN 623

Query: 134 SPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           +P + + + +++A +     LF  +K   +V +L+   ++E            LC G HV
Sbjct: 624 APGIVRVMPYDEAVKGGAMALF-GEKYGDEVRVLDLGFSRE------------LCGGTHV 670

Query: 189 RSTGQVKKFFKLMKVAG 205
             TG +  FFK++   G
Sbjct: 671 HRTGDI-GFFKIVAEGG 686


>gi|24216106|ref|NP_713587.1| alanyl-tRNA synthetase [Leptospira interrogans serovar Lai str.
           56601]
 gi|41018228|sp|Q8F0T4|SYA_LEPIN RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|24197348|gb|AAN50605.1|AE011499_4 alanyl-tRNA synthetase [Leptospira interrogans serovar Lai str.
           56601]
          Length = 977

 Score = 42.7 bits (99), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 60/128 (46%), Gaps = 14/128 (10%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY-YDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++  A++++  +  +  G I+   +  +DF      +S+E+ QIE  + E I ++
Sbjct: 618 HSGTHLLNGALRTLLGDHVLQKGSIVSPEYLRFDFSHPSSLTSEEIRQIESWVNESIRKN 677

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAK--ENVTLYRQGEW-FDLCRGPHVRS 190
            P   + LS E A+          K   + +   K  E V + + G+   + C G HV  
Sbjct: 678 FPVETKELSIEDAK----------KTGAVATFGEKYGERVRVVQMGDASIEFCGGTHVSR 727

Query: 191 TGQVKKFF 198
           TG++  FF
Sbjct: 728 TGEIGYFF 735


>gi|74001348|ref|XP_544833.2| PREDICTED: similar to mitochondrial ribosomal protein L39 isoform a
           [Canis familiaris]
          Length = 526

 Score = 42.7 bits (99), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 46/191 (24%), Positives = 88/191 (46%), Gaps = 24/191 (12%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIR---HS 76
           +T    A  +S    +K++   ++G+  D+  P+ +   IE +T +D     V +    S
Sbjct: 274 STPYSCAMHLSEWYCRKSILALVDGQPWDMYKPLTKSCEIEFLTFKDRDPGEVNKAYWRS 333

Query: 77  CAHIMAEAVQSIWPE------VQVAIGPIIEDGFYYD------FDKEQPFSSDELAQIEK 124
           CA +M   ++  + +      ++    P+I   F YD       D+  P + + L  + K
Sbjct: 334 CAMMMGCVIERAFKDEYVVSLIRAPEVPVICGAFCYDVVLDKRLDEWMP-TKENLRSLTK 392

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN----VTLYRQGEWF 180
             + +I +D PF    +  + A E+F+  K  YK++ +E   A +N    V L+R G++ 
Sbjct: 393 DARALIYKDLPFETLEVEAKVALEIFQHNK--YKMDFIEE-KASQNPERIVKLHRFGDFI 449

Query: 181 DLCRGPHVRST 191
           D+  GP +  T
Sbjct: 450 DVSEGPLIPRT 460


>gi|229826221|ref|ZP_04452290.1| hypothetical protein GCWU000182_01593 [Abiotrophia defectiva ATCC
           49176]
 gi|229789091|gb|EEP25205.1| hypothetical protein GCWU000182_01593 [Abiotrophia defectiva ATCC
           49176]
          Length = 785

 Score = 42.4 bits (98), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 1/60 (1%)

Query: 10  PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPEDPR 68
           P G +KN PV +T  D A SI  ++  K V    NGK+  +   ++ G  IEIIT ++ R
Sbjct: 447 PTGDVKNLPVGSTPIDFAYSIHSAVGNKMVGARANGKLVTIDYVIQNGDRIEIITSQNSR 506


>gi|116748707|ref|YP_845394.1| prolyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
 gi|152112959|sp|A0LHQ7|SYP_SYNFM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|116697771|gb|ABK16959.1| prolyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
          Length = 581

 Score = 42.4 bits (98), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 71/157 (45%), Gaps = 10/157 (6%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           +E+E   H  L R   +  +A   +GV      G ++ + + + +R ++   +  E+  P
Sbjct: 16  KEAETPSHILLLRGCYIHPVA---AGVYSLLPLGHRVAEKIKAILREELNAIEGLEVTMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW++S  +      +F +K   D     R F L   +      +    L+SYR 
Sbjct: 73  VLNPAELWKKSSRYYDIGQELFRIKDRKD-----REFVLAMTHEEVITDIARQFLRSYRH 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           LPV L +  +  R+E +    GL+RVR F  +DA+ F
Sbjct: 128 LPVMLYQIQTKIRDE-ARPRAGLLRVREFFMNDAYSF 163


>gi|332296462|ref|YP_004438385.1| Seryl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
 gi|332179565|gb|AEE15254.1| Seryl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
          Length = 426

 Score = 42.4 bits (98), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 39/166 (23%), Positives = 68/166 (40%), Gaps = 16/166 (9%)

Query: 246 HRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVL 300
           H  L + + L  I       GS   F    G ++ + L+++M    + D + E+  P ++
Sbjct: 141 HWDLGKTLGLLDIERAGKVTGSRFSFHVGLGARLVRALLNFMMDMHRSDGFVELWPPYLV 200

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++     +G    +R  +F  KCADD       + L P         F   + S   LP+
Sbjct: 201 NEASMYGTGQLPKFRDELF--KCADDP------YFLIPTAEVPVTNFFRDEILSDDSLPI 252

Query: 361 RLAEFGSVYRNEPSG---SLHGLMRVRGFTQDDAHVFCTKEQMFNE 403
           R   + + +R E       + G++R   F + +  VFC  E   NE
Sbjct: 253 RFCAYSACFRREAGSYGKDVRGIIRQHQFDKVELVVFCRPEDSMNE 298


>gi|323137975|ref|ZP_08073049.1| alanyl-tRNA synthetase [Methylocystis sp. ATCC 49242]
 gi|322396694|gb|EFX99221.1| alanyl-tRNA synthetase [Methylocystis sp. ATCC 49242]
          Length = 889

 Score = 42.4 bits (98), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 34/144 (23%), Positives = 62/144 (43%), Gaps = 14/144 (9%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSD 117
           +E+    + R      HS  HI+ EA++ +  +     G ++  +   +DF   +P + +
Sbjct: 548 LELDVDHERRRATRANHSATHILHEALRQVLGDHVAQKGSLVAPERLRFDFTHPKPLTEE 607

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEK-----ARELFESK--KEAYKVEILESIPAKEN 170
           ELA++E    EI+  ++P   + ++ +      AR LF  K   E   V +    P   +
Sbjct: 608 ELARVEALANEIVQDNAPVDTRLMAQDDAIRSGARALFGEKYGDEVRVVSMGRPDPGVAH 667

Query: 171 VTLYRQGEWFDLCRGPHVRSTGQV 194
                     +LC G HV  TG +
Sbjct: 668 PF------SVELCGGTHVSRTGDI 685


>gi|284931606|gb|ADC31544.1| Prolyl-tRNA synthetase [Mycoplasma gallisepticum str. F]
          Length = 474

 Score = 42.4 bits (98), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 44/181 (24%), Positives = 84/181 (46%), Gaps = 11/181 (6%)

Query: 272 GWKIFQTLISYMRRKI-KDDYEEINTPQVLDQH-LWQQSGHWDSYRANMFAV-KCADDTI 328
           GWKI+Q +   + ++  + D  E+  P ++ Q+    +  H + +   +F V K +++T 
Sbjct: 44  GWKIWQLIKKELTKEFDQRDILELCLPSLISQNDFLLEKKHLEGFAPELFIVTKTSNETE 103

Query: 329 KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQ 388
           K    + L+P +      ++   L++YR+LP++  ++ SV+R E +      +R   F  
Sbjct: 104 K----YILRPTSEIAFCNLWRETLRNYRQLPIKHNQWTSVFRVEKNT--RPFLRNSEFFW 157

Query: 389 DDAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENI 447
            + H  F T+EQ  +  + I  L     KD     ++    T  EK  G+   +   E I
Sbjct: 158 HEIHSCFETEEQSNDFAVDIWKLYQRFIKDILCIPLVAGEKTEAEKFAGAKTTY-TVETI 216

Query: 448 M 448
           M
Sbjct: 217 M 217


>gi|281201813|gb|EFA76021.1| prolyl-tRNA synthetase [Polysphondylium pallidum PN500]
          Length = 552

 Score = 42.4 bits (98), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 77/322 (23%), Positives = 132/322 (40%), Gaps = 62/322 (19%)

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
            A++P +       + + ++S+R+LP++L ++ +V R E    +   +R R F   + H 
Sbjct: 152 IAIRPTSETIMYPAYKNWIRSHRDLPLKLNQWVNVVRWEFKRPVP-FLRSREFLWQEGHT 210

Query: 394 -FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
            F TKE+   E L+I  L   +Y++     ++  L +  EK  G   L+    + ++G +
Sbjct: 211 AFATKEEADKEVLQILRLYKRVYEELLAVPVVEGLKSEKEKFAG--GLYT---STIEGFI 265

Query: 453 DTIKNSSQDRINTGVLLGEG--AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFY 510
            T  N    +  T   LG+     +G +FE    +A    WQ                  
Sbjct: 266 PT--NGRAIQAATSHCLGQNFSKMFGIEFED-ENNAKALAWQ------------------ 304

Query: 511 VNSHSEKCHPVMIHRAVFGSIERFIGIMI---ENFKG-NLPLWLSPIQAIVTTIT----S 562
            NS              +G   R IG+MI    + KG  LP  ++PIQ +V  +      
Sbjct: 305 -NS--------------WGLTTRTIGVMIMVHGDDKGLVLPPRIAPIQVVVVPLYFKDFD 349

Query: 563 SAV--EYAQEIANLLKSHHLSIETDFRNETINYKIREHSI----KKIPIIIICGDKEASE 616
           SA+  + A E+   LK   +    D R    NY  R+  I    K +PI +  G K+  +
Sbjct: 350 SAILDKKADEVVQRLKEAGIRAHLDNRT---NYNPRQKYIHWELKGVPIRVEVGPKDLEK 406

Query: 617 RSIGIRRFGSTTTQKVSLLDAI 638
             +   R  +   + V+  D I
Sbjct: 407 DVVMFCRRDNGVKESVANADLI 428


>gi|74006036|ref|XP_849468.1| PREDICTED: similar to glutamyl-prolyl tRNA synthetase isoform 2
            [Canis familiaris]
          Length = 1509

 Score = 42.4 bits (98), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 68/320 (21%), Positives = 123/320 (38%), Gaps = 58/320 (18%)

Query: 334  FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH- 392
             A++P +       +   ++S+R+LP+RL ++ +V R E        +R R F   + H 
Sbjct: 1113 IAVRPTSETVMYPAYAKWVQSHRDLPIRLNQWCNVVRWEFKHP-QPFLRTREFLWQEGHS 1171

Query: 393  VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
             F T E+   E L+I +L   +Y++     ++    T  EK  G D             +
Sbjct: 1172 AFATFEEAAEEVLQILDLYAKVYEELLAIPVVKGRKTEKEKFAGGD---------YTTTI 1222

Query: 453  DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
            +   ++S   I        G  +   FE I +D                 P      Y N
Sbjct: 1223 EAFISASGRAIQGATSHHLGQNFSKMFEIIFEDP--------------KTPGEKQFAYQN 1268

Query: 513  SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT-----SSAVEY 567
            S              +G   R IG+M      N+ L L P  A V  +      ++A+  
Sbjct: 1269 S--------------WGLTTRTIGVMTMVHGDNMGLVLPPRVASVQVVVIPCGITNALSE 1314

Query: 568  AQEIANLLK---------SHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKE-ASE 616
                A ++K         S ++ ++ D R N +  +K     +K +PI +  G ++  S 
Sbjct: 1315 EDRDALIIKCNDYRRRLLSVNVRVKVDLRDNYSPGWKFNHWELKGVPIRLEVGPRDMKSC 1374

Query: 617  RSIGIRRFGSTTTQKVSLLD 636
            + + +RR    T +K+++ D
Sbjct: 1375 QFVAVRR---DTGEKLTVAD 1391


>gi|93006462|ref|YP_580899.1| alanyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
 gi|122415158|sp|Q1QA88|SYA_PSYCK RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|92394140|gb|ABE75415.1| alanyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
          Length = 890

 Score = 42.4 bits (98), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 37/153 (24%), Positives = 72/153 (47%), Gaps = 14/153 (9%)

Query: 54  VREGSIEIITPEDPRSLAVIR------HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYY 106
           V  G I      D + L+ IR      HS  H++  A++ +  +     G ++  +   +
Sbjct: 541 VTMGDISTKQTADAQVLSSIRAASAKNHSATHLLHAALREVLGDAVTQKGSLVSSEVLRF 600

Query: 107 DFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEI 161
           DF  ++P S+ E+ +IE+ + E I  ++P   + +S ++A +     LF  +K    V +
Sbjct: 601 DFSYDKPVSTAEITRIERLVNEQIQANTPARIENMSIDEAMKQGAMALF-GEKYGSDVRV 659

Query: 162 LESIPAKENVTLYRQGEWFDLCRGPHVRSTGQV 194
           L ++     +   R+    +LC G HV+ TG +
Sbjct: 660 L-TMGTGSIIDGQRKPFSIELCGGLHVKRTGDI 691


>gi|331002247|ref|ZP_08325766.1| alanyl-tRNA synthetase 1 [Lachnospiraceae oral taxon 107 str.
           F0167]
 gi|330411341|gb|EGG90757.1| alanyl-tRNA synthetase 1 [Lachnospiraceae oral taxon 107 str.
           F0167]
          Length = 885

 Score = 42.4 bits (98), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 34/155 (21%), Positives = 68/155 (43%), Gaps = 21/155 (13%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSS 116
           ++E +   D R      HS  H++ +A++ +    V+ A   +  D   +DF   +  + 
Sbjct: 555 TVETVVDADNRKKTAANHSATHLLHKALREVLGNHVEQAGSYVAADRLRFDFTHFKSLTK 614

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENV 171
           +E+A +E+ +   I +  P +   ++ E A++     LF  K                +V
Sbjct: 615 EEIANVEEIVNAEINKALPVVTDVMNVEDAKKSGAMALFGEKYRG-------------DV 661

Query: 172 TLYRQGEWF-DLCRGPHVRSTGQVKKFFKLMKVAG 205
            +   G++  +LC G HV +T  + K FK++   G
Sbjct: 662 RVVSMGDFSKELCGGTHVHNTADI-KLFKVLSENG 695


>gi|325280067|ref|YP_004252609.1| AAA ATPase [Odoribacter splanchnicus DSM 20712]
 gi|324311876|gb|ADY32429.1| AAA ATPase [Odoribacter splanchnicus DSM 20712]
          Length = 554

 Score = 42.4 bits (98), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 40/182 (21%), Positives = 82/182 (45%), Gaps = 9/182 (4%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLS----DPVREGSIEIITPEDPRSLAVIRHS 76
            T  DV + I        +   +N ++ DL      P+R   I++ T +     ++   S
Sbjct: 21  TTLRDVKKIIFPENHNHILGALVNNQLQDLQFVVMTPLRVNFIDVTTLD---GYSIYSRS 77

Query: 77  CAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF-DKEQPFSSDELAQIEKKMQEIIARDSP 135
              ++ +AV  ++P+  +     I +G +    +KE   +   ++++E KM+EII  D P
Sbjct: 78  LIFVLYQAVAQLFPKKTLRAEYFISNGIFCRIVNKEIVLTPAIISELENKMKEIIQADYP 137

Query: 136 FLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVK 195
            +++ +  ++A  +F  +    K +++E+   K   +LY   +  D   G    ST  +K
Sbjct: 138 IVREEIPTDEAVLIFRKRGLKDKADLMET-RGKLFTSLYYLNDLPDYFYGTLAPSTSCLK 196

Query: 196 KF 197
            F
Sbjct: 197 TF 198


>gi|292655033|ref|YP_003534930.1| prolyl-tRNA synthetase [Haloferax volcanii DS2]
 gi|291371489|gb|ADE03716.1| prolyl-tRNA synthetase [Haloferax volcanii DS2]
          Length = 488

 Score = 42.4 bits (98), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 63/278 (22%), Positives = 115/278 (41%), Gaps = 56/278 (20%)

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI 411
           ++S+R+LP+R+ ++ SV R E +         + F       F TKE ++ E    H   
Sbjct: 129 VRSHRDLPLRVNQWASVVRWEAT-------ETKPF-------FRTKEFLWQEGHTAHET- 173

Query: 412 ISIYKDFGFEKIMVKLSTRPEKRVGSDALWDD--AENIMKGVLDTIKNSSQDRINTGVLL 469
               +D  +++ M +LS          +L++D  A  +++G          D+       
Sbjct: 174 ----RDGAWDETMTRLSQY-------QSLYEDVLAIPVLRGA-----KPEHDKFP----- 212

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF-NAFYVNSHSEKCHPVMIHRAVF 528
             GA      E ++ D  G+  Q GT      L + F  AF +   +E       H   +
Sbjct: 213 --GADTTTTVEALMPD--GKSVQAGTSHY---LGTSFAEAFDLTYTTEDEDEEPAHTTSW 265

Query: 529 GSIERFIGIMIENFKGN----LPLWLSPIQAIVTTITSS-----AVEYAQEIANLLKSHH 579
           G   R +G +I     +    LP  ++P Q ++  I  +      ++YA++IA  L+   
Sbjct: 266 GLSWRSLGALIMTHSDDQGLVLPPTIAPEQVVIVPIWQADTQEKVLDYAKDIAEDLEDAG 325

Query: 580 LSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASE 616
           + +E D R+E    +K  E  +K +P+    G  E  +
Sbjct: 326 VRVELDARDERNPGFKFNEWELKGVPVRFEIGPNEVDD 363


>gi|31544425|ref|NP_853003.1| prolyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)]
 gi|81834139|sp|Q7NBP5|SYP_MYCGA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|31541270|gb|AAP56571.1| Prolyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)]
 gi|284930481|gb|ADC30420.1| Prolyl-tRNA synthetase [Mycoplasma gallisepticum str. R(high)]
          Length = 474

 Score = 42.4 bits (98), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 44/181 (24%), Positives = 84/181 (46%), Gaps = 11/181 (6%)

Query: 272 GWKIFQTLISYMRRKI-KDDYEEINTPQVLDQH-LWQQSGHWDSYRANMFAV-KCADDTI 328
           GWKI+Q +   + ++  + D  E+  P ++ Q+    +  H + +   +F V K +++T 
Sbjct: 44  GWKIWQLIKKELTKEFDQRDILELCLPSLISQNDFLLEKKHLEGFAPELFIVTKTSNETE 103

Query: 329 KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQ 388
           K    + L+P +      ++   L++YR+LP++  ++ SV+R E +      +R   F  
Sbjct: 104 K----YILRPTSEIAFCNLWRETLRNYRQLPIKHNQWTSVFRVEKNT--RPFLRNSEFFW 157

Query: 389 DDAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENI 447
            + H  F T+EQ  +  + I  L     KD     ++    T  EK  G+   +   E I
Sbjct: 158 HEIHSCFETEEQSNDFAVDIWKLYQRFIKDILCIPLVAGEKTEAEKFAGAKTTY-TVETI 216

Query: 448 M 448
           M
Sbjct: 217 M 217


>gi|302788107|ref|XP_002975823.1| hypothetical protein SELMODRAFT_415888 [Selaginella moellendorffii]
 gi|300156824|gb|EFJ23452.1| hypothetical protein SELMODRAFT_415888 [Selaginella moellendorffii]
          Length = 264

 Score = 42.4 bits (98), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 20/46 (43%), Positives = 32/46 (69%), Gaps = 4/46 (8%)

Query: 84  AVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           AVQ+++P+ +V IGP IE+    DFD ++P S  +L +I+ +M EI
Sbjct: 2   AVQTLYPDAKVTIGPWIEN----DFDLKEPLSDKDLKKIKMEMTEI 43


>gi|296231948|ref|XP_002761372.1| PREDICTED: 39S ribosomal protein L39, mitochondrial [Callithrix
           jacchus]
          Length = 338

 Score = 42.4 bits (98), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 46/192 (23%), Positives = 86/192 (44%), Gaps = 24/192 (12%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIR---HS 76
           +T  + A  +S    +K++   ++G+  D+  P+ +   I+ +T +D     V +    S
Sbjct: 86  STPYNCAMHLSEWYCRKSILALVDGQPWDMYKPLTKSCEIQFLTFKDRDPGEVNKAYWRS 145

Query: 77  CAHIMAEAVQSIWPE------VQVAIGPIIEDGFYYD------FDKEQPFSSDELAQIEK 124
           CA +M   ++  + +      V+    P+I   F YD       D+  P + + L    K
Sbjct: 146 CAMMMGCVIERAFKDEYMVNLVRAPEVPVISGAFCYDVVLDSRLDEWIP-TKENLRSFTK 204

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN----VTLYRQGEWF 180
               +I +D PF    +  + A E+F+  K  YK++  E   A +N    V L+R G++ 
Sbjct: 205 DAHVLIYKDLPFETLEVDAKVALEIFQHNK--YKIDFTEE-KASQNPERIVKLHRIGDFI 261

Query: 181 DLCRGPHVRSTG 192
           D+  GP +  T 
Sbjct: 262 DVSEGPLIPRTS 273


>gi|208779166|ref|ZP_03246512.1| alanyl-tRNA synthetase [Francisella novicida FTG]
 gi|208744966|gb|EDZ91264.1| alanyl-tRNA synthetase [Francisella novicida FTG]
          Length = 865

 Score = 42.4 bits (98), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 11/144 (7%)

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFSSDELAQI 122
            + PR      HS  H++ +A++ +        G ++ E+   +DF  ++  S  E+ QI
Sbjct: 543 SDQPRLATAANHSATHLLHKALKLVLGGHAEQKGSLVDENRLRFDFTHDKAISRSEIEQI 602

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FD 181
           E  + + I  + P      S +KA+ L          E L      + V +   G++  +
Sbjct: 603 ELLVNQQIRANYPVTTIETSQQKAKSL--------GAEALFGEKYGDIVRVISMGDFSIE 654

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAG 205
           LC G HV  TG +   FK++   G
Sbjct: 655 LCGGTHVAYTGDI-GLFKIISEGG 677


>gi|74006044|ref|XP_858992.1| PREDICTED: similar to glutamyl-prolyl tRNA synthetase isoform 5
            [Canis familiaris]
          Length = 1508

 Score = 42.4 bits (98), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 68/320 (21%), Positives = 123/320 (38%), Gaps = 58/320 (18%)

Query: 334  FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH- 392
             A++P +       +   ++S+R+LP+RL ++ +V R E        +R R F   + H 
Sbjct: 1112 IAVRPTSETVMYPAYAKWVQSHRDLPIRLNQWCNVVRWEFKHP-QPFLRTREFLWQEGHS 1170

Query: 393  VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
             F T E+   E L+I +L   +Y++     ++    T  EK  G D             +
Sbjct: 1171 AFATFEEAAEEVLQILDLYAKVYEELLAIPVVKGRKTEKEKFAGGD---------YTTTI 1221

Query: 453  DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
            +   ++S   I        G  +   FE I +D                 P      Y N
Sbjct: 1222 EAFISASGRAIQGATSHHLGQNFSKMFEIIFEDP--------------KTPGEKQFAYQN 1267

Query: 513  SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT-----SSAVEY 567
            S              +G   R IG+M      N+ L L P  A V  +      ++A+  
Sbjct: 1268 S--------------WGLTTRTIGVMTMVHGDNMGLVLPPRVASVQVVVIPCGITNALSE 1313

Query: 568  AQEIANLLK---------SHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKE-ASE 616
                A ++K         S ++ ++ D R N +  +K     +K +PI +  G ++  S 
Sbjct: 1314 EDRDALIIKCNDYRRRLLSVNVRVKVDLRDNYSPGWKFNHWELKGVPIRLEVGPRDMKSC 1373

Query: 617  RSIGIRRFGSTTTQKVSLLD 636
            + + +RR    T +K+++ D
Sbjct: 1374 QFVAVRR---DTGEKLTVAD 1390


>gi|290969304|ref|ZP_06560829.1| phosphoribulokinase/uridine kinase family protein [Megasphaera
           genomosp. type_1 str. 28L]
 gi|290780810|gb|EFD93413.1| phosphoribulokinase/uridine kinase family protein [Megasphaera
           genomosp. type_1 str. 28L]
          Length = 546

 Score = 42.4 bits (98), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 24/127 (18%), Positives = 59/127 (46%), Gaps = 1/127 (0%)

Query: 71  AVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEII 130
           + ++ +   ++  AV  ++P  +V +   +    Y +       +  ++  I+++M+E++
Sbjct: 70  SCLQRTAIMLLVRAVDDLYPGGKVFVKHALRKALYCELSIGHTVTVRDVKMIQQRMEEMV 129

Query: 131 ARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRS 190
           A+D    +     E A E+  ++    + E+L+ +    ++  Y+ G  FD   GP + S
Sbjct: 130 AQDEKLTQVITGTEMAMEMCRNRHMEREAELLQHLDI-HHIMAYQCGRIFDYYMGPLLPS 188

Query: 191 TGQVKKF 197
            G +  F
Sbjct: 189 MGYITCF 195


>gi|256384016|gb|ACU78586.1| proline--tRNA ligase [Mycoplasma mycoides subsp. capri str. GM12]
 gi|256384848|gb|ACU79417.1| proline--tRNA ligase [Mycoplasma mycoides subsp. capri str. GM12]
 gi|296455440|gb|ADH21675.1| proline--tRNA ligase [synthetic Mycoplasma mycoides JCVI-syn1.0]
          Length = 474

 Score = 42.4 bits (98), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 77/376 (20%), Positives = 149/376 (39%), Gaps = 68/376 (18%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAV 321
           G + +   G++I++ +  Y+  + K  + + +  P ++ + L+ ++  H + +   +  V
Sbjct: 36  GTMIFRPYGYRIWELIQKYLDEEFKKINVDNVYFPLLIPESLFNKEKDHIEGFSPEIATV 95

Query: 322 -KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            K  +  +++     ++P +    +  F++ + SYR+LP+   ++ +V R E +      
Sbjct: 96  TKVGEKQLEE--NLFIRPTSEVVMMDYFSNEINSYRDLPLIYNQWCNVMRWEKTT--RPF 151

Query: 381 MRVRGFTQDDAHVFCTKEQMFNE----CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
           +R   F   + H   T    +NE    CLKI N+     KD     ++    T  EK   
Sbjct: 152 LRTSEFLWQEGH---TVHSSYNEAEDFCLKILNIYEKFAKDILLLPVICGKKTEKEK--- 205

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAI--GRDWQCG 494
                                                F G K  Y ++  +  G+  QCG
Sbjct: 206 -------------------------------------FAGAKDTYTIESLMFDGQALQCG 228

Query: 495 TIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLW 549
           T      N    ++  + N  ++  H    +   +G   R IG +I     +    LP  
Sbjct: 229 TSHFFADNFTKVYDIKFQNKENKLEHA---YSTSWGVSTRLIGALIMTHSDDNGLVLPSK 285

Query: 550 LSPIQAIVTTITSSAVEYAQEIANLLKSH--HLSIETDFRNETINYKIREHSIKKIPIII 607
           +SPIQ  +  I ++  E   ++  ++K       I+ D  +++  +KI E  IK IPI I
Sbjct: 286 ISPIQIQIIQIKNT--EQIDQVVEIIKDKLSDYRIDVDNSDKSFGFKISEAEIKGIPIRI 343

Query: 608 ICGDKEASERSIGIRR 623
             G ++     I I R
Sbjct: 344 EIGPRDLENNQITISR 359


>gi|74006042|ref|XP_536120.2| PREDICTED: similar to glutamyl-prolyl tRNA synthetase isoform 1
            [Canis familiaris]
          Length = 1534

 Score = 42.4 bits (98), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 70/322 (21%), Positives = 130/322 (40%), Gaps = 37/322 (11%)

Query: 334  FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH- 392
             A++P +       +   ++S+R+LP+RL ++ +V R E        +R R F   + H 
Sbjct: 1113 IAVRPTSETVMYPAYAKWVQSHRDLPIRLNQWCNVVRWEFKHP-QPFLRTREFLWQEGHS 1171

Query: 393  VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
             F T E+   E L+I +L   +Y++     ++    T  EK  G D      E  +    
Sbjct: 1172 AFATFEEAAEEVLQILDLYAKVYEELLAIPVVKGRKTEKEKFAGGDYT-TTIEAFISASG 1230

Query: 453  DTIKNSSQDRINTGVLLGEGAFYGPKFEYI--LKDAIGRDWQCGTIQVDFNLPSRFNAFY 510
              I+   Q       +LG      PK++ I  L+D        G      N    F   +
Sbjct: 1231 RAIQVPQQ-------VLGGSHAGSPKWDSIPGLQDQGATSHHLGQ-----NFSKMFEIIF 1278

Query: 511  VNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT-----SSAV 565
             +  +        ++  +G   R IG+M      N+ L L P  A V  +      ++A+
Sbjct: 1279 EDPKTPG-EKQFAYQNSWGLTTRTIGVMTMVHGDNMGLVLPPRVASVQVVVIPCGITNAL 1337

Query: 566  EYAQEIANLLK---------SHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKE-A 614
                  A ++K         S ++ ++ D R N +  +K     +K +PI +  G ++  
Sbjct: 1338 SEEDRDALIIKCNDYRRRLLSVNVRVKVDLRDNYSPGWKFNHWELKGVPIRLEVGPRDMK 1397

Query: 615  SERSIGIRRFGSTTTQKVSLLD 636
            S + + +RR    T +K+++ D
Sbjct: 1398 SCQFVAVRR---DTGEKLTVAD 1416


>gi|328676860|gb|AEB27730.1| Alanyl-tRNA synthetase [Francisella cf. novicida Fx1]
          Length = 865

 Score = 42.4 bits (98), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 35/143 (24%), Positives = 62/143 (43%), Gaps = 11/143 (7%)

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFSSDELAQIE 123
           + PR      HS  H++ +A++ +        G ++ E+   +DF  ++  S  E+ QIE
Sbjct: 544 DQPRLATAANHSATHLLHKALKLVLGGHAEQKGSLVDENRLRFDFTHDKAISRSEIEQIE 603

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDL 182
             + + I  + P      S +KA+ L          E L      + V +   G++  +L
Sbjct: 604 LLVNQQIRANYPVTTIETSQQKAKSL--------GAEALFGEKYGDIVRVISMGDFSIEL 655

Query: 183 CRGPHVRSTGQVKKFFKLMKVAG 205
           C G HV  TG +   FK++   G
Sbjct: 656 CGGTHVAYTGDI-GLFKIISEGG 677


>gi|118497373|ref|YP_898423.1| alanyl-tRNA synthetase [Francisella tularensis subsp. novicida
           U112]
 gi|195536062|ref|ZP_03079069.1| alanyl-tRNA synthetase [Francisella tularensis subsp. novicida FTE]
 gi|205830097|sp|A0Q604|SYA_FRATN RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|118423279|gb|ABK89669.1| alanyl-tRNA synthetase [Francisella novicida U112]
 gi|194372539|gb|EDX27250.1| alanyl-tRNA synthetase [Francisella tularensis subsp. novicida FTE]
          Length = 865

 Score = 42.4 bits (98), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 35/143 (24%), Positives = 62/143 (43%), Gaps = 11/143 (7%)

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFSSDELAQIE 123
           + PR      HS  H++ +A++ +        G ++ E+   +DF  ++  S  E+ QIE
Sbjct: 544 DQPRLATAANHSATHLLHKALKLVLGGHAEQKGSLVDENRLRFDFTHDKAISRSEIEQIE 603

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDL 182
             + + I  + P      S +KA+ L          E L      + V +   G++  +L
Sbjct: 604 LLVNQQIRANYPVTTIETSQQKAKSL--------GAEALFGEKYGDIVRVISMGDFSIEL 655

Query: 183 CRGPHVRSTGQVKKFFKLMKVAG 205
           C G HV  TG +   FK++   G
Sbjct: 656 CGGTHVAYTGDI-GLFKIISEGG 677


>gi|242092594|ref|XP_002436787.1| hypothetical protein SORBIDRAFT_10g008780 [Sorghum bicolor]
 gi|313471753|sp|C5Z7K4|SYAP_SORBI RecName: Full=Probable alanyl-tRNA synthetase, chloroplastic;
           AltName: Full=Alanine--tRNA ligase; Short=AlaRS; Flags:
           Precursor
 gi|241915010|gb|EER88154.1| hypothetical protein SORBIDRAFT_10g008780 [Sorghum bicolor]
          Length = 961

 Score = 42.4 bits (98), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 35/156 (22%), Positives = 72/156 (46%), Gaps = 24/156 (15%)

Query: 54  VREGSIEIITPEDP------RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYY 106
           +++GS+E+    D       R  A   H+  H++  A++S+        G ++  D   +
Sbjct: 614 IKQGSVEVGKEVDACVDAKLRQGAKAHHTATHLLQSALKSVVGSETSQAGSLVAFDRLRF 673

Query: 107 DFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEI 161
           DF+  +P S  EL +IE  + + I+  +    + ++ + A+      +F  +K   +V +
Sbjct: 674 DFNFHRPVSEGELTRIELLVNQWISNAAHLETKVMALQDAKNAGAIAMF-GEKYGEQVRV 732

Query: 162 LESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
           +E +P          G   +LC G HV +T +++ F
Sbjct: 733 VE-VP----------GVSLELCGGTHVSNTAEIRGF 757


>gi|254374194|ref|ZP_04989676.1| alanyl-tRNA synthetase [Francisella novicida GA99-3548]
 gi|151571914|gb|EDN37568.1| alanyl-tRNA synthetase [Francisella novicida GA99-3548]
          Length = 865

 Score = 42.4 bits (98), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 11/144 (7%)

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFSSDELAQI 122
            + PR      HS  H++ +A++ +        G ++ E+   +DF  ++  S  E+ QI
Sbjct: 543 SDQPRLATAANHSATHLLHKALKLVLGGHAEQKGSLVDENRLRFDFTHDKAISRSEIEQI 602

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FD 181
           E  + + I  + P      S +KA+ L          E L      + V +   G++  +
Sbjct: 603 ELLVNQQIRANYPVTTIETSQQKAKSL--------GAEALFGEKYGDIVRVISMGDFSIE 654

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAG 205
           LC G HV  TG +   FK++   G
Sbjct: 655 LCGGTHVAYTGDI-GLFKIISEGG 677


>gi|313672790|ref|YP_004050901.1| alanyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM 19672]
 gi|312939546|gb|ADR18738.1| alanyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM 19672]
          Length = 873

 Score = 42.4 bits (98), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 67/139 (48%), Gaps = 12/139 (8%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIED-GFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           H+  H++ +A+Q +  +     G ++ D    +DF   +  S D++ +IE+ +  II ++
Sbjct: 564 HTSTHLLHKALQMVLGDHVRQAGSLVNDEKLRFDFSHFEAISKDDIIEIERIVNSIIIKN 623

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQ 193
               K  +  E+A    +S   A   E  + I     V+ + +    +LC G HVR+TG+
Sbjct: 624 LSVTKTLMPIEEA---VKSGAMALFGEKYDRIVRVVEVSDFSK----ELCGGCHVRNTGE 676

Query: 194 VKKFFKL---MKVAGAYWR 209
           +  FF++   M VA    R
Sbjct: 677 I-GFFRIIGEMSVAAGVRR 694


>gi|226940409|ref|YP_002795483.1| alanyl-tRNA synthetase [Laribacter hongkongensis HLHK9]
 gi|226715336|gb|ACO74474.1| Sya [Laribacter hongkongensis HLHK9]
          Length = 877

 Score = 42.4 bits (98), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 36/155 (23%), Positives = 74/155 (47%), Gaps = 12/155 (7%)

Query: 54  VREGSIEIITPEDPRSLAVIR-HSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKE 111
           ++ G   + T +  R  A+ R HS  H+M  A++ +  +     G ++  +   +DF   
Sbjct: 543 LKTGMTVVATIDLHRRRAIQRNHSVTHLMHAALRDVLGKHVTQKGSLVTAERTRFDFSHH 602

Query: 112 QPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENV 171
           +P S++++A+IE+ +  +I  +     + +S + A++L            L      + V
Sbjct: 603 EPVSAEQMAEIERIVNFVIGANYDVSARLMSMDDAQKL--------GAMALFGEKYGDVV 654

Query: 172 TLYRQGEW-FDLCRGPHVRSTGQVKKFFKLMKVAG 205
            + + G++  +LC G HV  TG +  FFK++   G
Sbjct: 655 RVLKMGDFSTELCGGTHVSRTGDI-GFFKIVSEGG 688


>gi|255527855|ref|ZP_05394703.1| alanyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|255508466|gb|EET84858.1| alanyl-tRNA synthetase [Clostridium carboxidivorans P7]
          Length = 662

 Score = 42.4 bits (98), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 68/138 (49%), Gaps = 21/138 (15%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           H+  H++ EA++ +  E     G  ++D    +DF+  +  S +EL ++E  + + I + 
Sbjct: 349 HTATHLLNEALRKVLGEHVHQSGSYVDDERLRFDFNHFEAPSHEELKKVEALVNDEIVKV 408

Query: 134 SPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWF-DLCRGPH 187
                Q +S E+A+E     LF++K              K+ V +   G++  +LC G H
Sbjct: 409 LNVQTQSMSLEEAKETGAIALFDNK-------------YKDEVRVVSVGDFSKELCGGTH 455

Query: 188 VRSTGQVKKFFKLMKVAG 205
           V ++G++   FK++  AG
Sbjct: 456 VSNSGEI-GLFKIISEAG 472


>gi|154250174|ref|YP_001410999.1| alanyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
 gi|205830091|sp|A7HN59|SYA_FERNB RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|154154110|gb|ABS61342.1| alanyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
          Length = 867

 Score = 42.4 bits (98), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 40/161 (24%), Positives = 73/161 (45%), Gaps = 24/161 (14%)

Query: 43  INGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIED 102
           +NGK+  +++ V+    EI      R   +  H+  HI+  A++ +        G ++E 
Sbjct: 532 LNGKIS-VNEKVQSQVDEI-----KRKSTMRNHTATHILHSALRKVLGSHVRQAGSLVEP 585

Query: 103 G-FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSH-----EKARELFESKKEA 156
               +DF   Q  + DE+ +IE  + E+I +  P + +  S+     E A  LFE K   
Sbjct: 586 TRLRFDFTHYQALTKDEITKIENIVNEVILKAIPVVTEIKSYDEAVKEGAMALFEEKYGD 645

Query: 157 YKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
           + V +++     E           +LC G HV++TG++  F
Sbjct: 646 F-VRVVKVSDFSE-----------ELCGGTHVKNTGEIGLF 674


>gi|299756138|ref|XP_001829122.2| seryl-tRNA synthetase [Coprinopsis cinerea okayama7#130]
 gi|298411539|gb|EAU92757.2| seryl-tRNA synthetase [Coprinopsis cinerea okayama7#130]
          Length = 535

 Score = 42.4 bits (98), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 47/207 (22%), Positives = 83/207 (40%), Gaps = 16/207 (7%)

Query: 243 KRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTP 297
           KRDH  +A+E+DL  +       GS   F   +   +   L +Y M   IK  +  + TP
Sbjct: 223 KRDHVAIAKELDLLDLESGATVTGSSWYFLKNEAALLEMALSNYSMAVAIKHGFTPVTTP 282

Query: 298 QVLDQHLWQQSGHW--DSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
            V+   +  + G    D   ++M+ +    +T   L       +   G   +F + +   
Sbjct: 283 DVVRSDVAVRCGFQPRDQAASHMYHLTKNHETAPQLILSGTAEIPLAG---MFANKVYQQ 339

Query: 356 RELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
            ELP++    G  +R E    S    GL RV  FT+ +       E       K+ ++ I
Sbjct: 340 AELPLKYVGIGHAFRQEAGARSADTRGLYRVHQFTKVELFAVTDAEGSEEMMEKMKDIQI 399

Query: 413 SIYKDFGFEKIMVKLSTRPEKRVGSDA 439
            I +D      ++ +   P + +G+ A
Sbjct: 400 EILRDLNLSFRVLDM---PTEELGASA 423


>gi|126726568|ref|ZP_01742409.1| alanyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150]
 gi|126704431|gb|EBA03523.1| alanyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150]
          Length = 886

 Score = 42.4 bits (98), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 34/149 (22%), Positives = 64/149 (42%), Gaps = 6/149 (4%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPI-IEDGFYYDFDKEQPFSS 116
           + E++     R      HS  H++ EA++    +     G +   D   +DF      S 
Sbjct: 546 AAELVVDHARRGAIRANHSATHLLHEALRGALGDHVSQRGSLNAADRLRFDFSHNAAISQ 605

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESK--KEAYKVEI-LESIPAKENVTL 173
           D+L ++E+++   I +++    + ++ + AR L       E Y  E+ + S+  +     
Sbjct: 606 DDLRKVEEEVNAYIRQNTEVETRIMTPDDARALGAQALFGEKYGDEVRVVSMGQQSGSGK 665

Query: 174 YRQGEWF--DLCRGPHVRSTGQVKKFFKL 200
              GE +  +LC G HV  TG +  F  L
Sbjct: 666 GANGETYSLELCGGTHVGQTGDIGTFVIL 694


>gi|94309776|ref|YP_582986.1| alanyl-tRNA synthetase [Cupriavidus metallidurans CH34]
 gi|93353628|gb|ABF07717.1| alanyl-tRNA synthetase [Cupriavidus metallidurans CH34]
          Length = 884

 Score = 42.4 bits (98), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 65/144 (45%), Gaps = 20/144 (13%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKM 126
           R+  V  HS  H+M +A++ +        G +++ D   +DF    P +  ++ QIE+ +
Sbjct: 567 RARTVRNHSATHLMHKALREVLGTHVQQKGSLVDPDKTRFDFSHNAPLTDAQIRQIEEIV 626

Query: 127 QEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
              I  ++P + Q +  + A +     LF  +K A  V +L    +KE            
Sbjct: 627 NAEILSNAPTVAQVMPFDDAVKSGAMALF-GEKYADDVRVLSIGTSKE------------ 673

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAG 205
           LC G HV  TG +   FK++  AG
Sbjct: 674 LCGGTHVTRTGDI-GLFKIVVEAG 696


>gi|325971945|ref|YP_004248136.1| alanyl-tRNA synthetase [Spirochaeta sp. Buddy]
 gi|324027183|gb|ADY13942.1| alanyl-tRNA synthetase [Spirochaeta sp. Buddy]
          Length = 598

 Score = 42.4 bits (98), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 33/135 (24%), Positives = 66/135 (48%), Gaps = 21/135 (15%)

Query: 75  HSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           H+  H++ +A++++  E V      I  +   +DF    P S++E+ ++E  + E I R+
Sbjct: 461 HTATHMLHQALRTVLGEHVGQKGSNITIERLRFDFTHHSPMSAEEIQKVEDMVNEAIDRN 520

Query: 134 SPFLKQYLSHEKAR-----ELFESKKEAYKVEILESIPAKENVTLYRQGEWF-DLCRGPH 187
                + ++ ++A+       F+SK               E V +Y  G++  ++C GPH
Sbjct: 521 LAVKCETMTLDEAKAQGAIAFFDSK-------------YGEQVKVYSIGDYSKEVCGGPH 567

Query: 188 VRSTGQVKKFFKLMK 202
           V +T Q+   FK++K
Sbjct: 568 VENTSQMGH-FKILK 581


>gi|315641198|ref|ZP_07896275.1| proline--tRNA ligase [Enterococcus italicus DSM 15952]
 gi|315482965|gb|EFU73484.1| proline--tRNA ligase [Enterococcus italicus DSM 15952]
          Length = 556

 Score = 42.4 bits (98), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 43/204 (21%), Positives = 85/204 (41%), Gaps = 33/204 (16%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYE-----EI 294
           E++ R H+ L R   +  IA   +GV  +     ++ + + +     IKD+ +     E+
Sbjct: 17  EADVRSHQLLVRAGYIRQIA---TGVYAYLPLAQRVMKKITAI----IKDELDAIGANEM 69

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
             P +L    WQ         +++F V     + ++ R + L P      + +  + ++S
Sbjct: 70  QMPNILPMDYWQDDACRRLCTSSLFEV-----SDRNQRQYMLAPSQEKAFIELVRNEVQS 124

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF----CTKEQMFNE------- 403
           YR+LP++L +    YR+E      G +  R F   D + F     + EQ + +       
Sbjct: 125 YRKLPLKLYQVQMKYRDEKKPKF-GFLYSREFLMTDFYSFHAGAVSLEQTYQQVESSIKT 183

Query: 404 ----CLKIHNLIISIYKDFGFEKI 423
               C   ++L++      G EK+
Sbjct: 184 ILARCGLTYHLVLGHTNRVGIEKV 207


>gi|193661987|ref|XP_001946406.1| PREDICTED: probable prolyl-tRNA synthetase, mitochondrial-like
           [Acyrthosiphon pisum]
          Length = 433

 Score = 42.4 bits (98), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 33/151 (21%), Positives = 75/151 (49%), Gaps = 9/151 (5%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           + +KL  E+ +  I +  +G+        +    LI  + + + D   ++I+ P ++  +
Sbjct: 28  NSQKLMLELGI--IRQSANGLYHLLPLAQRSLDKLIFIINKNMMDIGAQKISMPVLIHSN 85

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++G  +    +++ V   +D  +  + F L P +      +F+   K+Y++LP+ L 
Sbjct: 86  LWKKTGRLNKNIEDLYLV---ND--RKSKEFLLSPTHEEVVTDLFSSDPKTYKQLPLMLY 140

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           + G+ +R+E    L G++R + F   D + F
Sbjct: 141 QVGTKFRDEIRPKL-GIIRSKEFLMKDLYSF 170


>gi|313680711|ref|YP_004058450.1| alanyl-tRNA synthetase [Oceanithermus profundus DSM 14977]
 gi|313153426|gb|ADR37277.1| alanyl-tRNA synthetase [Oceanithermus profundus DSM 14977]
          Length = 895

 Score = 42.4 bits (98), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 32/130 (24%), Positives = 62/130 (47%), Gaps = 8/130 (6%)

Query: 75  HSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           H+  H++  A++++  P+V+ A   +  D   +DF      S +E+ ++E  +   +  D
Sbjct: 578 HTATHLLHAALRAVLGPQVRQAGSLVAPDRLRFDFTHAAALSPEEVRKVELLVNRWVQAD 637

Query: 134 SPFLKQYLSHEKARE-----LFESK-KEAYKVEILESIPAKENVTLYRQGEWFDLCRGPH 187
            P    ++  E+A++     LF  K  +  +V  +E  P    + L  +    +LC G H
Sbjct: 638 FPVSWTFMPLEEAKKAGAMALFGEKYADTVRVVKVEGSPDTAGI-LEAEVRSMELCGGCH 696

Query: 188 VRSTGQVKKF 197
           VR TG++  F
Sbjct: 697 VRRTGEIGYF 706


>gi|325109123|ref|YP_004270191.1| alanyl-tRNA synthetase [Planctomyces brasiliensis DSM 5305]
 gi|324969391|gb|ADY60169.1| alanyl-tRNA synthetase [Planctomyces brasiliensis DSM 5305]
          Length = 869

 Score = 42.4 bits (98), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 16/152 (10%)

Query: 54  VREGSIEI---ITPE-DPRSLAVIR--HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYY 106
           +++G +E+   +T E D      IR  HS  H+M  A++    E     G  ++ D   +
Sbjct: 529 LKQGKLEVGQTLTAEVDGERRDAIRRAHSATHLMHHALRETLGENATQRGSKVQQDELRF 588

Query: 107 DFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIP 166
           DF  ++P S +EL +IE  +   IA  +      +  E AR      K A  +   E  P
Sbjct: 589 DFAHKKPVSPEELRRIEDMVNSHIANGNDVATDLMKIEDAR-----AKGAMAL-FGEKYP 642

Query: 167 AKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
             + V +   G++  +LC G H+ +TGQV  F
Sbjct: 643 --DLVRVVSMGDYSIELCGGTHLSNTGQVGVF 672


>gi|74006040|ref|XP_858912.1| PREDICTED: similar to glutamyl-prolyl tRNA synthetase isoform 4
            [Canis familiaris]
          Length = 1465

 Score = 42.4 bits (98), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 68/320 (21%), Positives = 123/320 (38%), Gaps = 58/320 (18%)

Query: 334  FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH- 392
             A++P +       +   ++S+R+LP+RL ++ +V R E        +R R F   + H 
Sbjct: 1069 IAVRPTSETVMYPAYAKWVQSHRDLPIRLNQWCNVVRWEFKHP-QPFLRTREFLWQEGHS 1127

Query: 393  VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
             F T E+   E L+I +L   +Y++     ++    T  EK  G D             +
Sbjct: 1128 AFATFEEAAEEVLQILDLYAKVYEELLAIPVVKGRKTEKEKFAGGD---------YTTTI 1178

Query: 453  DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
            +   ++S   I        G  +   FE I +D                 P      Y N
Sbjct: 1179 EAFISASGRAIQGATSHHLGQNFSKMFEIIFEDP--------------KTPGEKQFAYQN 1224

Query: 513  SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT-----SSAVEY 567
            S              +G   R IG+M      N+ L L P  A V  +      ++A+  
Sbjct: 1225 S--------------WGLTTRTIGVMTMVHGDNMGLVLPPRVASVQVVVIPCGITNALSE 1270

Query: 568  AQEIANLLK---------SHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKE-ASE 616
                A ++K         S ++ ++ D R N +  +K     +K +PI +  G ++  S 
Sbjct: 1271 EDRDALIIKCNDYRRRLLSVNVRVKVDLRDNYSPGWKFNHWELKGVPIRLEVGPRDMKSC 1330

Query: 617  RSIGIRRFGSTTTQKVSLLD 636
            + + +RR    T +K+++ D
Sbjct: 1331 QFVAVRR---DTGEKLTVAD 1347


>gi|323344880|ref|ZP_08085104.1| alanine--tRNA ligase [Prevotella oralis ATCC 33269]
 gi|323094150|gb|EFZ36727.1| alanine--tRNA ligase [Prevotella oralis ATCC 33269]
          Length = 873

 Score = 42.4 bits (98), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 79/181 (43%), Gaps = 25/181 (13%)

Query: 34  LAKKAVAVAINGKVCDLSDPVREG--SIEIIT--PEDP------------RSLAVIRHSC 77
           +  + V V  N KV ++ D  RE   SI I+   P++P            R  +   H+ 
Sbjct: 507 VGDQGVLVNGNEKV-EIIDTKRENNQSIHIVKQLPKEPSADFMACVDTEKRDASAANHTA 565

Query: 78  AHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPF 136
            H++  A++ +  + V+     +  D   +DF   Q  + +E+ Q+E+ + E+I +D P 
Sbjct: 566 THLLDYALKQVLGDHVEQKGSYVSPDTLRFDFSHFQKVTDEEIRQVERMVNEMIRQDFP- 624

Query: 137 LKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKK 196
               L   +   + E+KK        E    K  V + R G   + C G H +STG++  
Sbjct: 625 ----LDEHRDTPVEEAKKMGAVALFGEKYGDK--VRVVRFGPSCEFCGGIHAKSTGRIGM 678

Query: 197 F 197
           F
Sbjct: 679 F 679


>gi|301106649|ref|XP_002902407.1| prolyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
 gi|262098281|gb|EEY56333.1| prolyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
          Length = 764

 Score = 42.4 bits (98), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 80/380 (21%), Positives = 147/380 (38%), Gaps = 60/380 (15%)

Query: 261 DGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ-VLDQHLWQQSGHWDSYRANM 318
           D SG        ++I++ +  ++ R +K    +    P  V  + L ++  H + +   +
Sbjct: 289 DVSGCYILRPYSYEIWERVQQFLDRNLKAIGVKNCYFPMFVTKEKLEKEKDHLEGFAPEV 348

Query: 319 -FAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
            +  K  +  +KD    A++P +       F + ++S+R+LP++L ++ +V R E     
Sbjct: 349 AWVTKSGNSELKD--PIAIRPTSETIMYPAFKNWIRSHRDLPMKLNQWNNVVRWEFKNPT 406

Query: 378 HGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
              +R R F   + H    TKE+   E   + +   + Y++     ++  + T  EK  G
Sbjct: 407 -PFLRTREFLWQEGHTAHATKEEADEEVRAVLDFYAACYEELLAVPMIKGVKTEKEKFAG 465

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
           +D                                    Y    E  +  A GR  Q  T 
Sbjct: 466 AD------------------------------------YTTTIEGFIP-ATGRGIQAATS 488

Query: 497 QVDFNLPSRFNA-FYVNSHSEKCHPVMIHRAVFGSIERFIGIMI---ENFKG-NLPLWLS 551
            +   L   F   F + +  E    ++  +  +G   R +G+MI    + KG  LP  ++
Sbjct: 489 HM---LGQNFGKMFGITAEYEDGKKLIPWQNSWGFTTRSLGVMIMVHGDDKGLVLPPRVA 545

Query: 552 PIQAIVTTI---TSSAVE----YAQEIANLLKSHHLSIETDFRN-ETINYKIREHSIKKI 603
           P Q IV  I       VE     A EI   L    + IE D R   T  +K     +K +
Sbjct: 546 PTQVIVVPIPFKNQDEVEEIFAKADEIVAKLADAGVRIEADKRCVYTPGWKYNHWELKGV 605

Query: 604 PIIIICGDKEASERSIGIRR 623
           P+    G K+ +++ + + R
Sbjct: 606 PLRFEVGPKDIAKKQVRVVR 625


>gi|28210757|ref|NP_781701.1| alanyl-tRNA synthetase [Clostridium tetani E88]
 gi|41018208|sp|Q896F2|SYA_CLOTE RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|28203195|gb|AAO35638.1| alanyl-tRNA synthetase [Clostridium tetani E88]
          Length = 879

 Score = 42.4 bits (98), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 84/180 (46%), Gaps = 34/180 (18%)

Query: 43  INGKVCDLSDPVREGSIEIITPEDPRSLAVIR---------HSCAHIMAEAVQSI-WPEV 92
           I+GK+    + + EGSI++   +D  +L V R         HS  H++ EA++ I    +
Sbjct: 529 ISGKILHFVE-ILEGSIKL---QDTVNLTVDRLRRDAIRKNHSATHLLHEALKKIVGAHI 584

Query: 93  QVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE---- 148
           + A   + E    +DF+     + +EL  +EK + + I    P   + ++ E+A+E    
Sbjct: 585 EQAGSFVDEHRLRFDFNHFSSLTKEELKNVEKLVNKKIMEVIPVNTKVMNIEEAKESGAV 644

Query: 149 -LFESKKEAYKVEILESIPAKENVTLYRQGEWF-DLCRGPHVRSTGQVKKFFKLMKVAGA 206
            LF+ K +             E V +   G++  +LC G HV ++G++   FK++   G 
Sbjct: 645 ALFDEKYD-------------EKVRVVSLGDFSKELCGGTHVSNSGEI-GLFKIISETGV 690


>gi|300933077|ref|ZP_07148333.1| prolyl-tRNA synthetase [Corynebacterium resistens DSM 45100]
          Length = 592

 Score = 42.4 bits (98), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 37/170 (21%), Positives = 73/170 (42%), Gaps = 10/170 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R     +I     GV  W   G ++ + + + +R ++     +E++ P 
Sbjct: 19  DAEVPSHKLLVRAG---YIRRAAPGVYSWLPLGLRVLRKVENVVRNEMDAIGAQELSFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++ +G W  Y   +  +K  D    D   + L P +     +V      SY++ 
Sbjct: 76  LLPREPYETTGRWTEYGDALLRLK--DRKGAD---YLLGPTHEEMFTSVVKGEYNSYKDF 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
           PV L +  + YR+E      G++R R F   D++ F   ++        H
Sbjct: 131 PVTLYQIQNKYRDEER-PRAGILRGREFIMKDSYSFDMDDEGLERSYHKH 179


>gi|119713374|gb|ABL97437.1| alanine-tRNA ligase [uncultured marine bacterium EB80_69G07]
          Length = 888

 Score = 42.4 bits (98), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 31/126 (24%), Positives = 58/126 (46%), Gaps = 7/126 (5%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++ E+++    +  +  G ++  D   +DF   +P +++EL  I+K + E +   
Sbjct: 564 HSATHLLHESLRRTLGKHVMQKGSLVAPDRLRFDFSHMKPITNEELETIDKLVNEYVKNG 623

Query: 134 SPFLKQYLSHEKARE--LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRST 191
           S    + ++ + A E        E Y  E+      KE    +      +LC G HV++T
Sbjct: 624 SEVTTRIMTPKAAIEKGALAFFGEKYGEEVRVVSMGKEKDAYFST----ELCGGTHVKNT 679

Query: 192 GQVKKF 197
           G + KF
Sbjct: 680 GDIGKF 685


>gi|86138306|ref|ZP_01056880.1| alanyl-tRNA synthetase [Roseobacter sp. MED193]
 gi|85824831|gb|EAQ45032.1| alanyl-tRNA synthetase [Roseobacter sp. MED193]
          Length = 883

 Score = 42.4 bits (98), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 4/104 (3%)

Query: 101 EDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESK--KEAYK 158
           +D   +DF   +  S  EL Q+   +   I +++P   + ++ + AR L       E Y 
Sbjct: 589 DDRLRFDFSHTKALSDAELCQVSADVNAFIRQNTPVETRIMTPDDARALGAQALFGEKYG 648

Query: 159 VEILESIPAKENVTLYRQGEWF--DLCRGPHVRSTGQVKKFFKL 200
            E+      K +    + G+ +  +LC G HVR TG +  F  L
Sbjct: 649 DEVRVVSMGKADTGKGQSGDTYSIELCGGTHVRQTGDIGTFVIL 692


>gi|332017449|gb|EGI58172.1| 39S ribosomal protein L39, mitochondrial [Acromyrmex echinatior]
          Length = 316

 Score = 42.4 bits (98), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 54/241 (22%), Positives = 101/241 (41%), Gaps = 23/241 (9%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAV---IRHS 76
           +T  D A  IS S+AK +    ++ +V D+  P   +  +++IT + PR   V      +
Sbjct: 59  STPYDCARHISESVAKMSAIALVDNQVWDMHRPFTGDCELQLITMQSPRIRMVNYAFWRT 118

Query: 77  CAHIMAEAVQSIWPE------VQVAIGPIIEDGFYYDFDKEQPF---SSDELAQIEKKMQ 127
           C+ I+     S + +          I  I    F YD   + P    ++ EL  +     
Sbjct: 119 CSLILGAVADSAFKDNINLHLYSFPIPNITSGSFTYDVFVDLPDWRPTNSELCAMSALFV 178

Query: 128 EIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN---VTLYRQGEWFDLCR 184
           ++  R+    +  +    A ++F+     +K + + +I    N   VTLYR G+  D+ +
Sbjct: 179 KLKNRELLLERLEVPSSIALDMFQDN--PFKSQQIPNIAKNSNNDRVTLYRMGDHVDISK 236

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY-FLEESEK 243
           GP V ++  V +    + V+  +   + +   L R  G A      L  + Y  LE+  K
Sbjct: 237 GPMVGNSDLVGR----VTVSAIHRLTNGSTDGLYRFQGIALPKGILLNHFAYGILEKRAK 292

Query: 244 R 244
           +
Sbjct: 293 K 293


>gi|317508518|ref|ZP_07966185.1| prolyl-tRNA synthetase [Segniliparus rugosus ATCC BAA-974]
 gi|316253209|gb|EFV12612.1| prolyl-tRNA synthetase [Segniliparus rugosus ATCC BAA-974]
          Length = 606

 Score = 42.4 bits (98), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 43/192 (22%), Positives = 79/192 (41%), Gaps = 11/192 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E  +H+ L R      ++    GV  W   G K  + + + +R ++     +EI  P 
Sbjct: 19  DAEVPNHKLLVRGGYFRRVS---PGVFAWLPLGLKALRQIENVVREEMDGIGGQEILLPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +  +  ++ S  W  Y  N+F +K  D    D   + L P +      +      SY++L
Sbjct: 76  LAPRQPYETSNRWTEYGDNLFRLK--DRKGGD---YLLAPTHEELFALLVKGEYTSYKDL 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS-IYKD 417
           PV L +  + YR+E      G++R R F   D++ F   E         H      I+  
Sbjct: 131 PVILYQIQTKYRDEER-PRAGILRGREFVMKDSYSFDVDEAGNKAAYHAHREAYQRIFDR 189

Query: 418 FGFEKIMVKLST 429
            G   ++V  ++
Sbjct: 190 LGISYVIVAATS 201


>gi|205830252|sp|Q1LQ59|SYA_RALME RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
          Length = 874

 Score = 42.4 bits (98), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 65/144 (45%), Gaps = 20/144 (13%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKM 126
           R+  V  HS  H+M +A++ +        G +++ D   +DF    P +  ++ QIE+ +
Sbjct: 557 RARTVRNHSATHLMHKALREVLGTHVQQKGSLVDPDKTRFDFSHNAPLTDAQIRQIEEIV 616

Query: 127 QEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
              I  ++P + Q +  + A +     LF  +K A  V +L    +KE            
Sbjct: 617 NAEILSNAPTVAQVMPFDDAVKSGAMALF-GEKYADDVRVLSIGTSKE------------ 663

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAG 205
           LC G HV  TG +   FK++  AG
Sbjct: 664 LCGGTHVTRTGDI-GLFKIVVEAG 686


>gi|251773418|gb|EES53967.1| alanyl-tRNA synthetase [Leptospirillum ferrodiazotrophum]
          Length = 884

 Score = 42.4 bits (98), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 52/210 (24%), Positives = 90/210 (42%), Gaps = 30/210 (14%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAE----SISRSLAKKAVAVAINGKVCDLSDPVREG- 57
           +D+   +P+G  +   V   G  VA     SIS +       +A+ GKV  LS  V +G 
Sbjct: 493 TDVSPFYPEGGGQ---VGDQGRLVAPGGIVSISGAYRPYPGWIALRGKV--LSGVVTQGE 547

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSS 116
           ++++      R  A + H+  H++  A++ +    V+ A   ++ D   +DF    P + 
Sbjct: 548 TVQLQVDRSLRLGARVHHTATHLLHAALRKVLGSHVRQAGSLVLPDRLRFDFSHGAPITD 607

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKAREL------FESKKEAYKVEILESIPAKEN 170
            ++ +IE  +   I   +P   +     KA  L      F  +K   +V ++E IP    
Sbjct: 608 GQIEEIEGMVNRWIGEGAPV--EISEKNKADALASGAMAFFDEKYGDRVRVVE-IP---- 660

Query: 171 VTLYRQGEWFDLCRGPHVRSTGQVKKFFKL 200
                 G   +LC G H  ST ++  FF L
Sbjct: 661 ------GMSVELCGGTHALSTSEIGSFFIL 684


>gi|29346339|ref|NP_809842.1| prolyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
 gi|81445136|sp|Q8A988|SYP_BACTN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|29338234|gb|AAO76036.1| prolyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
          Length = 497

 Score = 42.4 bits (98), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 63/300 (21%), Positives = 128/300 (42%), Gaps = 56/300 (18%)

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECL 405
            + + ++SYR+LP+   ++ +V+R E    L   +R   F   + H    T+E+   E +
Sbjct: 134 TYKNWIQSYRDLPILCNQWANVFRWEMRTRL--FLRTAEFLWQEGHTAHATREEAEEEAI 191

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
           ++ N    +Y +F  EK M                   A  ++KGV      S+ +R   
Sbjct: 192 RMLN----VYGEFA-EKYM-------------------AVPVVKGV-----KSANERF-- 220

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIH 524
                 GA      E +++D  G+  Q GT   +  N    F+  +VN  ++  +   + 
Sbjct: 221 -----AGALDTYTIEAMMQD--GKALQSGTSHFLGQNFAKAFDVQFVNKENKMEY---VW 270

Query: 525 RAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTITSSAVEYAQEIANL------ 574
              +G   R +G +I     +    LP  L+PIQ ++  I  +  +  Q  A +      
Sbjct: 271 ATSWGVSTRLMGALIMTHSDDNGLVLPPHLAPIQVVIVPIYKNDEQLKQIDAKVEGIVAK 330

Query: 575 LKSHHLSIETD-FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
           LK+  +S++ D   N+   +K  ++ +K +P+ ++ G ++    ++ + R  +   + V+
Sbjct: 331 LKALGISVKYDNADNKRPGFKFADYELKGVPVRLVMGGRDLENNTMEVMRRDTLEKETVT 390


>gi|34557905|ref|NP_907720.1| prolyl-tRNA synthetase [Wolinella succinogenes DSM 1740]
 gi|81832821|sp|Q7M8L1|SYP_WOLSU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|34483623|emb|CAE10620.1| PROLYL-TRNA SYNTHETASE [Wolinella succinogenes]
          Length = 570

 Score = 42.4 bits (98), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 35/147 (23%), Positives = 65/147 (44%), Gaps = 15/147 (10%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVL-----DQHLWQQSGHW 311
           +I + GSG+  +   G ++   +    R+ +K++ ++    +V+        LW+ SG +
Sbjct: 31  YIQQVGSGIYNFLPLGKRVMDKI----RQVVKEEMDQAGAQEVMLGFVTPAELWRNSGRF 86

Query: 312 DSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRN 371
           + Y   +   K   +       F L P +    V +    +KSY++LP+ L +    +R+
Sbjct: 87  EKYGKELLRFKDRKEN-----DFVLGPTHEEMVVELAKGYVKSYKQLPLHLYQIHLKFRD 141

Query: 372 EPSGSLHGLMRVRGFTQDDAHVFCTKE 398
           E      GLMR R F   D + F   E
Sbjct: 142 EIRPRF-GLMRGREFVMKDGYSFHANE 167


>gi|85712448|ref|ZP_01043497.1| Alanyl-tRNA synthetase [Idiomarina baltica OS145]
 gi|85693726|gb|EAQ31675.1| Alanyl-tRNA synthetase [Idiomarina baltica OS145]
          Length = 867

 Score = 42.4 bits (98), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 36/148 (24%), Positives = 71/148 (47%), Gaps = 23/148 (15%)

Query: 60  EIITPE-DPRSLAVIR--HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFS 115
           + +T E D    A IR  HS  H++  A++ I  +     G ++E +   +DF   +P +
Sbjct: 536 DAVTAEIDSERRANIRRNHSATHLLHAALRDILGDHVQQKGSLVEAERMRFDFAHFEPLT 595

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKEN 170
             ++ ++E+ + E I ++     Q ++ ++A++     LF  K +             ++
Sbjct: 596 KAQITELERVVNEQIRKNVRLTTQVMNIDEAKKAGAMALFGEKYD-------------DD 642

Query: 171 VTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
           V + R GE+  +LC G HV +TG +  F
Sbjct: 643 VRVVRMGEFSMELCGGTHVAATGDIGLF 670


>gi|296133407|ref|YP_003640654.1| alanyl-tRNA synthetase [Thermincola sp. JR]
 gi|296031985|gb|ADG82753.1| alanyl-tRNA synthetase [Thermincola potens JR]
          Length = 884

 Score = 42.4 bits (98), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 34/133 (25%), Positives = 64/133 (48%), Gaps = 11/133 (8%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++ +A++ +  +     G ++E +   +DF   +  + +EL ++E ++ E+I   
Sbjct: 569 HSVTHLLHKALKEVLGDHVNQAGSLVEPERLRFDFTHFRAVTPEELQKVEDRVNEMI--- 625

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTG 192
              L     H     L E+K  A     L      E V + + G++  +LC G H+RSTG
Sbjct: 626 ---LANLDVHAFETSLDEAK--ALGATALFGEKYGEKVRVVKMGDYSMELCGGTHLRSTG 680

Query: 193 QVKKFFKLMKVAG 205
           +    FK++  +G
Sbjct: 681 EA-GLFKILSESG 692


>gi|256545145|ref|ZP_05472511.1| alanine--tRNA ligase [Anaerococcus vaginalis ATCC 51170]
 gi|256399186|gb|EEU12797.1| alanine--tRNA ligase [Anaerococcus vaginalis ATCC 51170]
          Length = 870

 Score = 42.4 bits (98), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 41/164 (25%), Positives = 82/164 (50%), Gaps = 24/164 (14%)

Query: 54  VREGSIE----IITPEDPRSLAVIR-HSCAHIMAEAVQSIWP-EVQVAIGPIIEDGFYYD 107
           V EG +E    +      R L + R H+  H++ +A++++   EV+ A   + E    +D
Sbjct: 537 VEEGKLESCNALFKVNKQRRLDITRNHTATHLLDQALRNLLSDEVKQAGSLVDEYKLRFD 596

Query: 108 FDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEIL 162
           F      + DE+ +IE ++ E I    P  K+ +S++++ +     LFE K   YK +++
Sbjct: 597 FTYPNALTKDEIKKIEDEVNEKIREQLPVKKEIMSYKESEKLGAIGLFEDK---YK-DMV 652

Query: 163 ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGA 206
             +     V+ Y +    +LC G HV ++ ++   FK+++ + A
Sbjct: 653 RVVS----VSDYSK----ELCGGCHVNNSSEI-LMFKIIQESSA 687


>gi|170289222|ref|YP_001739460.1| alanyl-tRNA synthetase [Thermotoga sp. RQ2]
 gi|205830279|sp|B1LBS9|SYA_THESQ RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|170176725|gb|ACB09777.1| alanyl-tRNA synthetase [Thermotoga sp. RQ2]
          Length = 863

 Score = 42.4 bits (98), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 39/155 (25%), Positives = 68/155 (43%), Gaps = 19/155 (12%)

Query: 50  LSDPVREGSIEIITPEDPRSLAVIR-HSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYD 107
           L   +R G   ++  +  R  + +R H+  H++  A++ +  + V+ A   +  D   +D
Sbjct: 535 LDGTLRRGQKVVLRVDKKRRESTMRNHTATHLLHAALKKVLGDHVRQAGSLVAPDRLRFD 594

Query: 108 FDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEIL 162
           F   +  SS E+ Q+E  + E I    P   +Y S+E+A +     LF  K       + 
Sbjct: 595 FTHFKGLSSAEIEQVEDLVNEWIMEAIPVEVRYTSYEEAVKSGVVALFTEKYGDVVRVVE 654

Query: 163 ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
               +KE            LC G HV++TGQ+  F
Sbjct: 655 VPGVSKE------------LCGGTHVKNTGQIGLF 677


>gi|302387920|ref|YP_003823742.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium saccharolyticum WM1]
 gi|302198548|gb|ADL06119.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium saccharolyticum WM1]
          Length = 774

 Score = 42.0 bits (97), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 1/60 (1%)

Query: 10  PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPR 68
           P G +KN P  +T  D A SI  ++  K V   +NGK+ ++   +  G  +E+IT ++ R
Sbjct: 436 PSGDVKNLPAGSTPIDFAYSIHSAVGNKMVGARVNGKLVNIEYVIENGDQVEVITSQNSR 495


>gi|70608065|ref|YP_256935.1| threonyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
 gi|68568713|gb|AAY81642.1| threonyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
          Length = 387

 Score = 42.0 bits (97), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 44/77 (57%), Gaps = 3/77 (3%)

Query: 546 LPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPI 605
           LPLW++PIQ  +  + S  ++ A +IA+ +K+    ++ D  N+ +  KI     + IP 
Sbjct: 268 LPLWMNPIQVRILPVKSDYLQDAFKIASYIKAR---VDVDDINDNLGSKIARAGKEWIPF 324

Query: 606 IIICGDKEASERSIGIR 622
           +++ G++E    S+ I+
Sbjct: 325 VVLLGEREVKTGSLTIK 341


>gi|225026503|ref|ZP_03715695.1| hypothetical protein EUBHAL_00752 [Eubacterium hallii DSM 3353]
 gi|224956191|gb|EEG37400.1| hypothetical protein EUBHAL_00752 [Eubacterium hallii DSM 3353]
          Length = 867

 Score = 42.0 bits (97), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 64/129 (49%), Gaps = 18/129 (13%)

Query: 75  HSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++ ++++++    V+ +   + +D   +DF   Q  +++ELA++EK + E IA D
Sbjct: 555 HSATHLLQKSLRTVLGNHVEQSGSYVDKDRLRFDFSHFQALTAEELAEVEKMVNEKIAED 614

Query: 134 SPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
                + +S ++A+      LF  +K   KV +         VT+    + F  C G HV
Sbjct: 615 LTVSTEIMSVDEAKNTGAMALF-GEKYGDKVRV---------VTMGDFSKEF--CAGTHV 662

Query: 189 RSTGQVKKF 197
             TG +K F
Sbjct: 663 PHTGVIKAF 671


>gi|83774018|dbj|BAE64143.1| unnamed protein product [Aspergillus oryzae]
          Length = 632

 Score = 42.0 bits (97), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 31/118 (26%), Positives = 50/118 (42%), Gaps = 8/118 (6%)

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           Q LW++SG      + +F      ++      F L P +      +     KSYR+LP+R
Sbjct: 123 QELWERSGRLGE-GSEVFKFHDRKES-----RFLLAPTHEEEITTLVGSLAKSYRDLPLR 176

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDF 418
           + +    YR+EP     GL+R R F   D + F CT E+       +      ++ D 
Sbjct: 177 VYQISRKYRDEPR-PRQGLLRGREFIMKDLYTFDCTVEEALETYTSVKAAYTRLFNDL 233


>gi|315651813|ref|ZP_07904817.1| GTP diphosphokinase [Eubacterium saburreum DSM 3986]
 gi|315485943|gb|EFU76321.1| GTP diphosphokinase [Eubacterium saburreum DSM 3986]
          Length = 762

 Score = 42.0 bits (97), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 1/60 (1%)

Query: 10  PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPEDPR 68
           PDG +KN P  +   D A SI  ++  K V   +NG++ ++   ++ G  +EIIT ++ +
Sbjct: 424 PDGDVKNLPAGSNPIDFAYSIHSAVGNKMVGARVNGRLVNIDYELKSGDRVEIITSQNSK 483


>gi|254469063|ref|ZP_05082469.1| alanyl-tRNA synthetase [beta proteobacterium KB13]
 gi|207087873|gb|EDZ65156.1| alanyl-tRNA synthetase [beta proteobacterium KB13]
          Length = 873

 Score = 42.0 bits (97), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 40/174 (22%), Positives = 81/174 (46%), Gaps = 27/174 (15%)

Query: 44  NGKVCDLSDPVREGSIEIITP-----EDPRSLAVIR-HSCAHIMAEAVQSIWPEVQVAIG 97
           NG +  + + VR G ++I  P     +  R  ++ R HS  H++ +A+++I  +     G
Sbjct: 529 NGVILHIGELVR-GQLKIKDPVLCQVDHIRRDSIKRNHSATHLLHKALKTILGDHVEQKG 587

Query: 98  PIIED-GFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFE 151
            ++ +    +DF      S  E+ Q+E+ +   I +++P   + ++ +KA++     LF 
Sbjct: 588 SLVNEFRTRFDFSHSSALSETEIQQVEQIVNNEILQNNPTSAEVMALDKAKKSGAMMLFG 647

Query: 152 SKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAG 205
            K +             + V +   G   +LC G HV +TG +   FK++  +G
Sbjct: 648 EKYD-------------DEVRVLTIGNSKELCGGTHVNATGDI-GLFKILNESG 687


>gi|90417824|ref|ZP_01225736.1| prolyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1]
 gi|90337496|gb|EAS51147.1| prolyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1]
          Length = 440

 Score = 42.0 bits (97), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 43/197 (21%), Positives = 85/197 (43%), Gaps = 15/197 (7%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTP 297
           +E+E   HR + R      I +  +G+  +   G ++   + + +R  + +    E+  P
Sbjct: 16  KEAEIVSHRLMLRAG---MIRQQAAGLYSFLPLGKRVLDKVCAIIREEQNRSGAIELLMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW++SG ++ Y   M  ++  D   +DL      P N      +F   +++Y++
Sbjct: 73  TIQSADLWRESGRYEDYGKEMLRIE--DRHGRDL---LYGPTNEEMITDIFRSYVRTYKD 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+ L      +R+E      G+MR R F   DA+ F       N  +    + ++  + 
Sbjct: 128 LPLNLYHLQWKFRDEVRPRF-GVMRSREFLMKDAYSFDLDYD--NSKIAYDRMFVAYLRT 184

Query: 418 F---GFEKIMVKLSTRP 431
           F   G + I ++  T P
Sbjct: 185 FERCGLKAIPMRADTGP 201


>gi|71024203|ref|XP_762331.1| hypothetical protein UM06184.1 [Ustilago maydis 521]
 gi|46101855|gb|EAK87088.1| hypothetical protein UM06184.1 [Ustilago maydis 521]
          Length = 735

 Score = 42.0 bits (97), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 25/101 (24%), Positives = 49/101 (48%), Gaps = 6/101 (5%)

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           I  P +L   LW Q+G +    + ++ ++   ++      F L P +      +  + + 
Sbjct: 124 IAMPNLLPSKLWHQTGRYTVMGSELYKLRDRKNS-----EFVLGPTHEEEITKLVANQVD 178

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           S R+LP+RL +  + +R+EP   + GL+R + F   D + F
Sbjct: 179 SDRQLPLRLYQITTKFRDEPRPRM-GLLRTKEFLMKDLYSF 218


>gi|195552807|ref|XP_002076543.1| GD17572 [Drosophila simulans]
 gi|194202154|gb|EDX15730.1| GD17572 [Drosophila simulans]
          Length = 144

 Score = 42.0 bits (97), Expect = 0.30,   Method: Composition-based stats.
 Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 4/77 (5%)

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN--VTLYRQGEW 179
           +  +M ++ A+D    +  +  + A+E+F+  K  YK E L SI  + N  VTLYR G+ 
Sbjct: 4   LSAEMVKLAAQDLRIERLDVQQDLAQEMFKDSK--YKSEQLPSIAQQTNGRVTLYRLGDH 61

Query: 180 FDLCRGPHVRSTGQVKK 196
            D+ RGP V ST  + K
Sbjct: 62  IDISRGPMVASTSFLGK 78


>gi|307352954|ref|YP_003894005.1| glycyl-tRNA synthetase [Methanoplanus petrolearius DSM 11571]
 gi|307156187|gb|ADN35567.1| glycyl-tRNA synthetase [Methanoplanus petrolearius DSM 11571]
          Length = 572

 Score = 42.0 bits (97), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 48/191 (25%), Positives = 72/191 (37%), Gaps = 70/191 (36%)

Query: 272 GWKIFQTLISYMRRKI----------KDDYEEINTPQVLDQHLWQQSGHWDSYRANMF-- 319
           G+  +  L + M+RKI          +D Y EI  P + ++ ++  SGH   +   M   
Sbjct: 30  GFIDYGPLGAMMKRKIENIWRYFYVIQDGYYEIECPTIGEESIYLASGHVKGFADKMIQC 89

Query: 320 --------AVKCADD---------TIKDLRTFALKPMNCP-------------------- 342
                   A   A+D         +++DL T ALK + CP                    
Sbjct: 90  PHCGEYHRADHVAEDNGIENAEIMSLEDL-TAALKDLTCPACSETFDGAEVYYFNLMFQT 148

Query: 343 ------------------GHVAVFNHGLKSYRE-LPVRLAEFGSVYRNEPSGSLHGLMRV 383
                             G    FN  L+ YR+ LP    + G  YRNE S    G++R+
Sbjct: 149 TIGPGSQRKGYLRPETAQGIFTDFNRLLRFYRDKLPFGTVQIGKSYRNEIS-PRQGMIRL 207

Query: 384 RGFTQDDAHVF 394
           R FTQ +A +F
Sbjct: 208 REFTQAEAEIF 218


>gi|154505866|ref|ZP_02042604.1| hypothetical protein RUMGNA_03408 [Ruminococcus gnavus ATCC 29149]
 gi|153793884|gb|EDN76304.1| hypothetical protein RUMGNA_03408 [Ruminococcus gnavus ATCC 29149]
          Length = 768

 Score = 42.0 bits (97), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 22/81 (27%), Positives = 44/81 (54%), Gaps = 6/81 (7%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEII 62
           D+    P+G +KN P  +T  D A +I  ++  K V   +NGK+ ++   ++ G  IEI+
Sbjct: 424 DVYCFTPNGDVKNLPNGSTPVDFAYAIHSAVGNKMVGARVNGKLVNIDYKIQNGDRIEIL 483

Query: 63  TPEDPRS-----LAVIRHSCA 78
           T ++ +      L++++ + A
Sbjct: 484 TSQNSKGPSRDWLSIVKSTQA 504


>gi|291543767|emb|CBL16876.1| (p)ppGpp synthetase, RelA/SpoT family [Ruminococcus sp. 18P13]
          Length = 737

 Score = 42.0 bits (97), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 1/68 (1%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI-E 60
           P +I +  P G     P+H+T  D A  I   +  K +   ++GK+  L   ++ G I E
Sbjct: 390 PEEIMVMTPRGDSIALPIHSTIIDFAYRIHSEIGNKTIGAKVDGKIVPLDYQLQTGQICE 449

Query: 61  IITPEDPR 68
           IIT +DP+
Sbjct: 450 IITSKDPK 457


>gi|312795632|ref|YP_004028554.1| Alanyl-tRNA synthetase [Burkholderia rhizoxinica HKI 454]
 gi|312167407|emb|CBW74410.1| Alanyl-tRNA synthetase (EC 6.1.1.7) [Burkholderia rhizoxinica HKI
           454]
          Length = 893

 Score = 42.0 bits (97), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 34/136 (25%), Positives = 61/136 (44%), Gaps = 19/136 (13%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKM 126
           R+     HS  H+M +A++ +  P VQ     +  D   +DF    P S DE+ ++E  +
Sbjct: 576 RARTARNHSATHLMHKALREVLGPHVQQKGSLVDPDKTRFDFSHHAPLSDDEIRRVEAIV 635

Query: 127 QEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
              +  ++P L + +  + A +     LF  +K   +V +L+   ++E            
Sbjct: 636 NAEVLANTPGLARVMPFDDAVKSGAMALF-GEKYGDEVRVLDLGFSRE------------ 682

Query: 182 LCRGPHVRSTGQVKKF 197
           LC G HV+ TG +  F
Sbjct: 683 LCGGTHVQRTGDIGLF 698


>gi|260170261|ref|ZP_05756673.1| prolyl-tRNA synthetase [Bacteroides sp. D2]
 gi|315918623|ref|ZP_07914863.1| prolyl-tRNA synthetase [Bacteroides sp. D2]
 gi|313692498|gb|EFS29333.1| prolyl-tRNA synthetase [Bacteroides sp. D2]
          Length = 497

 Score = 42.0 bits (97), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 63/300 (21%), Positives = 128/300 (42%), Gaps = 56/300 (18%)

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECL 405
            + + ++SYR+LP+   ++ +V+R E    L   +R   F   + H    T+E+   E +
Sbjct: 134 TYKNWIQSYRDLPILCNQWANVFRWEMRTRL--FLRTAEFLWQEGHTAHATREEAEEEAI 191

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
           ++ N    +Y +F  EK M                   A  ++KGV      S+ +R   
Sbjct: 192 RMLN----VYGEFA-EKYM-------------------AVPVVKGV-----KSANERF-- 220

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIH 524
                 GA      E +++D  G+  Q GT   +  N    F+  +VN  ++  +   + 
Sbjct: 221 -----AGALDTYTIEAMMQD--GKALQSGTSHFLGQNFAKAFDVQFVNKENKMEY---VW 270

Query: 525 RAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTITSSAVEYAQEIANL------ 574
              +G   R +G +I     +    LP  L+PIQ ++  I  +  +  Q  A +      
Sbjct: 271 ATSWGVSTRLMGALIMTHSDDNGLVLPPHLAPIQVVIVPIYKNDEQLKQIDAKVEGIVAK 330

Query: 575 LKSHHLSIETD-FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
           LK+  +S++ D   N+   +K  ++ +K +P+ ++ G ++    ++ + R  +   + V+
Sbjct: 331 LKALGISVKYDNADNKRPGFKFADYELKGVPVRLVMGGRDLENNTMEVMRRDTLEKETVT 390


>gi|229828401|ref|ZP_04454470.1| hypothetical protein GCWU000342_00462 [Shuttleworthia satelles DSM
           14600]
 gi|229792995|gb|EEP29109.1| hypothetical protein GCWU000342_00462 [Shuttleworthia satelles DSM
           14600]
          Length = 790

 Score = 42.0 bits (97), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 1/60 (1%)

Query: 10  PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPEDPR 68
           P G +KN P  +T  D A SI  ++  + V   +NGK+  +   ++ G  IEIIT ++ R
Sbjct: 434 PTGDVKNLPAGSTPVDFAYSIHSAVGNRMVGAKVNGKLVPIDYGIQNGDRIEIITSQNSR 493


>gi|149030653|gb|EDL85690.1| threonyl-tRNA synthetase-like 1, isoform CRA_b [Rattus norvegicus]
          Length = 186

 Score = 42.0 bits (97), Expect = 0.31,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 40/77 (51%), Gaps = 1/77 (1%)

Query: 547 PLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPI 605
           PLWLSP Q +V  + +   +YA+++   L++  L  + D     T++ ++R   +     
Sbjct: 76  PLWLSPFQVVVIPVRTEQEDYARQVQQCLQAAGLVSDLDADCGLTLSRRVRRAQLAHYNF 135

Query: 606 IIICGDKEASERSIGIR 622
             + G +E S+ S+ +R
Sbjct: 136 QFVVGQREQSQMSVNVR 152


>gi|224372192|ref|YP_002606564.1| alanyl-tRNA synthetase [Nautilia profundicola AmH]
 gi|223588444|gb|ACM92180.1| alanyl-tRNA synthetase [Nautilia profundicola AmH]
          Length = 853

 Score = 42.0 bits (97), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 45/216 (20%), Positives = 96/216 (44%), Gaps = 30/216 (13%)

Query: 54  VREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQ 112
           ++ G   +   ++ RS     H+  H++  A++ +  E     G ++E +   +DF   +
Sbjct: 537 LKTGDEVVAKVDENRSEIAKNHTATHLLHAALRKVLGEHVTQAGSLVEANRLRFDFTHPK 596

Query: 113 PFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVT 172
             + +EL  IE+ +  +IA+  P   + +S ++A+++            L      + V 
Sbjct: 597 ALTKEELESIEEMVNRVIAKSIPAEVKEMSIDEAKKM--------GAMALFGEKYGDVVR 648

Query: 173 LYRQGEW-FDLCRGPHVRSTGQVKKFF------------KLMKVA--GAYWRGDSNRPML 217
           + + G++  +LC G HV +T +V  F+            ++  VA  GAY      R ++
Sbjct: 649 VVKFGDFSVELCGGTHVNNTAEVNSFYIIKESGVSAGVRRIEAVAGFGAYRYAKGFRDLV 708

Query: 218 SRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREM 253
             I   + N  ++L  ++    E +K + +KL  E+
Sbjct: 709 EEI--KSENKAKDLKAFV----EKQKEEIKKLKTEI 738


>gi|189465935|ref|ZP_03014720.1| hypothetical protein BACINT_02298 [Bacteroides intestinalis DSM
           17393]
 gi|189434199|gb|EDV03184.1| hypothetical protein BACINT_02298 [Bacteroides intestinalis DSM
           17393]
          Length = 497

 Score = 42.0 bits (97), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 64/290 (22%), Positives = 121/290 (41%), Gaps = 56/290 (19%)

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECL 405
            + + + SYR+LP+   ++ +V R E    L   +R   F   + H    T+E+   E +
Sbjct: 134 TYKNWINSYRDLPILCNQWANVMRWEMRTRL--FLRTAEFLWQEGHTAHATREEAEEEAV 191

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
           ++ N    +Y +F  EK M                   A  ++KGV      S+ +R   
Sbjct: 192 RMLN----VYAEFA-EKYM-------------------AVPVVKGV-----KSANERF-- 220

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIH 524
                 GA      E +++D  G+  Q GT   +  N    F+  +VN  ++  +   + 
Sbjct: 221 -----AGALDTYTIEAMMQD--GKALQSGTSHFLGQNFAKAFDVQFVNKENKMEY---VW 270

Query: 525 RAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTITSSAV------EYAQEIANL 574
              +G   R +G +I     +    LP  L+PIQ ++  I  +A       E    I   
Sbjct: 271 ATSWGVSTRLMGALIMTHSDDNGLVLPPHLAPIQVVIVPIYKNAEMLQKIDEKVAGIVAK 330

Query: 575 LKSHHLSIETD-FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRR 623
           LKS  +S++ D   N+   +K  ++ +K +P+ ++ G ++    ++ + R
Sbjct: 331 LKSMGVSVKYDNADNKRPGFKFADYELKGVPVRLVMGGRDLENNTMEVMR 380


>gi|38234063|ref|NP_939830.1| prolyl-tRNA synthetase [Corynebacterium diphtheriae NCTC 13129]
 gi|81829888|sp|Q6NGM7|SYP_CORDI RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|38200325|emb|CAE50010.1| prolyl-tRNA synthetase [Corynebacterium diphtheriae]
          Length = 585

 Score = 42.0 bits (97), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 39/174 (22%), Positives = 75/174 (43%), Gaps = 18/174 (10%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R     +I     GV  W   G +  + + + +R ++     +E+  P 
Sbjct: 19  DAEVPSHKLLVRAG---YIRRTAPGVYTWLPLGLRTLRKVETVVREEMDAIGAQELLFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L +  ++Q+  W  Y  ++F +K  D    D        +  P H  +F   +K    S
Sbjct: 76  LLPREPYEQTHRWTEYGDSLFRLK--DRKGGDY-------LLGPTHEEMFASAVKDMYSS 126

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
           Y++ PV L +  + YR+E      G++R R F   D++ F   +    +  + H
Sbjct: 127 YKDFPVTLYQIQTKYRDEER-PRAGILRGREFVMKDSYSFDMSDAGLEDSYQRH 179


>gi|307179779|gb|EFN67969.1| Probable prolyl-tRNA synthetase, mitochondrial [Camponotus
           floridanus]
          Length = 422

 Score = 42.0 bits (97), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 31/127 (24%), Positives = 60/127 (47%), Gaps = 8/127 (6%)

Query: 272 GWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G ++   LI+ + +++ +   E+I  P +    LW+++  +DS +  +F +K   +    
Sbjct: 48  GMRVLNKLINLVDKEMTNLGAEKILLPALTSTSLWKKTNRYDSNKNELFTIKDRHE---- 103

Query: 331 LRTFALKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
            + + L P        + +  G  S + LP+RL +  S +R+E    L G +R R F   
Sbjct: 104 -KEYILSPTYEEAICDLISSTGSLSTKLLPLRLYQISSKWRDEMKPRL-GFLRSREFIMK 161

Query: 390 DAHVFCT 396
           D + F T
Sbjct: 162 DLYTFDT 168


>gi|154486903|ref|ZP_02028310.1| hypothetical protein BIFADO_00736 [Bifidobacterium adolescentis
           L2-32]
 gi|154084766|gb|EDN83811.1| hypothetical protein BIFADO_00736 [Bifidobacterium adolescentis
           L2-32]
          Length = 611

 Score = 42.0 bits (97), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 32/139 (23%), Positives = 63/139 (45%), Gaps = 11/139 (7%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK 322
           G+  W   G  +   + + +R ++   D +E++   +L +  ++ +  W+ Y  N+F +K
Sbjct: 42  GIWTWLPLGLNVLNKIENIIREEMASIDAQEVHFSGLLPREPYEATHRWEEYGDNIFRLK 101

Query: 323 CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE--PSGSLHGL 380
              +       + L P +      +      SY++LPV L +  + YR+E  P     GL
Sbjct: 102 DRHEA-----DYLLAPTHEEMFTLLVKDLYSSYKDLPVTLYQIQTKYRDEFRPRA---GL 153

Query: 381 MRVRGFTQDDAHVFCTKEQ 399
           +R R F   DA+ F   ++
Sbjct: 154 IRGREFIMKDAYSFTLDKE 172


>gi|325298627|ref|YP_004258544.1| alanyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
 gi|324318180|gb|ADY36071.1| alanyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
          Length = 872

 Score = 42.0 bits (97), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 12/132 (9%)

Query: 66  DPRSLAVIRHSCAHIMAEAV-QSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D R+     HSC H++ EA+ Q +   V+     +  +   +DF   Q  + ++L ++E 
Sbjct: 554 DKRAACAANHSCTHLLDEALRQVLGTHVEQKGSLVTPESLRFDFSHFQKVTPEQLREVEH 613

Query: 125 KMQEIIARDSPFLKQY--LSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
            +   I  + P L +Y  L  EKA+EL        K          + V + + G   + 
Sbjct: 614 LVNAKIRENVP-LTEYRNLPIEKAKELGAIALFGEKY--------GDEVRVVQFGSSIEF 664

Query: 183 CRGPHVRSTGQV 194
           C G HV +TG++
Sbjct: 665 CGGTHVSATGKI 676


>gi|189485045|ref|YP_001955986.1| alanyl-tRNA synthetase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
 gi|205830280|sp|B1GZ43|SYA_UNCTG RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|170287004|dbj|BAG13525.1| alanyl-tRNA synthetase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
          Length = 877

 Score = 42.0 bits (97), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 59/130 (45%), Gaps = 14/130 (10%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           H+ AH++ +A++  +       G ++  D F +DF        D+L +IEK++  II  +
Sbjct: 561 HTAAHLLHKALREAFGGHITQAGSLVARDYFRFDFTHFSALKKDDLIKIEKRVNSIIRLN 620

Query: 134 SPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPH 187
           S    + ++  KAR      LF    E Y  E+   +   E+      G +  +LC G H
Sbjct: 621 SEVCIETMAIAKARNAGAMALF---GEKYGDEVRTVLIKNES----GDGNYSMELCGGTH 673

Query: 188 VRSTGQVKKF 197
           V  TG +  F
Sbjct: 674 VSRTGDIGIF 683


>gi|254489976|ref|ZP_05103171.1| alanyl-tRNA synthetase [Methylophaga thiooxidans DMS010]
 gi|224465061|gb|EEF81315.1| alanyl-tRNA synthetase [Methylophaga thiooxydans DMS010]
          Length = 858

 Score = 42.0 bits (97), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 33/148 (22%), Positives = 68/148 (45%), Gaps = 21/148 (14%)

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIE 123
           E  R    + HS  H++  A++++  +  +  G +++     +DF   +P + D+L  IE
Sbjct: 535 ESNRQATALNHSATHLLHAALRNVLGDHVMQKGSLVDPQRLRFDFSHFEPVTPDQLHDIE 594

Query: 124 KKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGE 178
           + + + I  + P   + ++ E+A++     LF  K +             + V +   G+
Sbjct: 595 RMVNQQIRLNHPVDTKLMAIEEAKKSGAMALFGEKYD-------------DEVRVLSMGD 641

Query: 179 W-FDLCRGPHVRSTGQVKKFFKLMKVAG 205
           +  +LC G HV+ TG +    K+   AG
Sbjct: 642 FSIELCGGTHVQHTGDI-GLLKITAEAG 668


>gi|212716449|ref|ZP_03324577.1| hypothetical protein BIFCAT_01373 [Bifidobacterium catenulatum DSM
           16992]
 gi|212660702|gb|EEB21277.1| hypothetical protein BIFCAT_01373 [Bifidobacterium catenulatum DSM
           16992]
          Length = 611

 Score = 42.0 bits (97), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 32/139 (23%), Positives = 63/139 (45%), Gaps = 11/139 (7%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK 322
           G+  W   G  +   + + +R ++   D +E++   +L +  ++ +  W+ Y  N+F +K
Sbjct: 42  GIWTWLPLGLNVLNKIENIIREEMASIDAQEVHFSGLLPREPYEATHRWEEYGDNIFRLK 101

Query: 323 CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE--PSGSLHGL 380
              +       + L P +      +      SY++LPV L +  + YR+E  P     GL
Sbjct: 102 DRHEA-----DYLLAPTHEEMFTLLVKDLYSSYKDLPVTLYQIQTKYRDEFRPRA---GL 153

Query: 381 MRVRGFTQDDAHVFCTKEQ 399
           +R R F   DA+ F   ++
Sbjct: 154 IRGREFIMKDAYSFTLDKE 172


>gi|254448289|ref|ZP_05061751.1| alanyl-tRNA synthetase [gamma proteobacterium HTCC5015]
 gi|198262156|gb|EDY86439.1| alanyl-tRNA synthetase [gamma proteobacterium HTCC5015]
          Length = 868

 Score = 42.0 bits (97), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 58/139 (41%), Gaps = 9/139 (6%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKM 126
           R    + HS  H+M  A++ +  + VQ     + E+   +DF   QP +  ELAQ+E  +
Sbjct: 549 RRATELNHSATHLMHWALREVLGDHVQQKGSLVNEEYLRFDFSHFQPMTDSELAQVEDLV 608

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGP 186
              I ++     + ++ E A       K A  + +       E   L       +LC G 
Sbjct: 609 NAEILKNRATQTRLMTMEDA-------KAAGAMALFGEKYGDEVRVLNIGDHSIELCGGT 661

Query: 187 HVRSTGQVKKFFKLMKVAG 205
           HV  TG +   FKL+   G
Sbjct: 662 HVDRTGDI-GLFKLIGEGG 679


>gi|329769169|ref|ZP_08260589.1| prolyl-tRNA synthetase [Gemella sanguinis M325]
 gi|328839388|gb|EGF88966.1| prolyl-tRNA synthetase [Gemella sanguinis M325]
          Length = 566

 Score = 42.0 bits (97), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 30/121 (24%), Positives = 58/121 (47%), Gaps = 11/121 (9%)

Query: 279 LISYMRRKIKDDYEEINTPQVL-----DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           +I  + + I+D++ +I   ++L      +  W+QSG W  Y+     ++  D   +    
Sbjct: 49  VIQNIEKVIRDEHAKIGASELLMPILQSEDYWKQSGRW--YKMGDELIRVTD---RKNAG 103

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
           +AL P          ++ + SY++LPV L +  + +R+E    L GL+R + F   D + 
Sbjct: 104 YALSPTAEEVICQTVSNMVTSYKQLPVNLYQIQTKFRDEIRPRL-GLLRGKEFIMKDGYS 162

Query: 394 F 394
           F
Sbjct: 163 F 163


>gi|224539709|ref|ZP_03680248.1| hypothetical protein BACCELL_04618 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224518677|gb|EEF87782.1| hypothetical protein BACCELL_04618 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 520

 Score = 42.0 bits (97), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 65/300 (21%), Positives = 125/300 (41%), Gaps = 56/300 (18%)

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECL 405
            + + + SYR+LP+   ++ +V R E    L   +R   F   + H    T+E+   E +
Sbjct: 157 TYKNWINSYRDLPILCNQWANVMRWEMRTRL--FLRTAEFLWQEGHTAHATREEAEEEAV 214

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
           ++ N    +Y +F  EK M                   A  ++KGV      S+ +R   
Sbjct: 215 RMLN----VYAEFA-EKYM-------------------AVPVVKGV-----KSANERF-- 243

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIH 524
                 GA      E +++D  G+  Q GT   +  N    F+  +VN  ++  +   + 
Sbjct: 244 -----AGALDTYTIEAMMQD--GKALQSGTSHFLGQNFAKAFDVQFVNKENKMEY---VW 293

Query: 525 RAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTITSSAV------EYAQEIANL 574
              +G   R +G +I     +    LP  L+PIQ ++  I  +A       E    I   
Sbjct: 294 ATSWGVSTRLMGALIMTHSDDNGLVLPPHLAPIQVVIVPIYKNAEMLQKINEKVAGIVAK 353

Query: 575 LKSHHLSIETD-FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
           LKS  +S++ D   N+   +K  ++ +K +P+ ++ G ++    ++ + R  +   + +S
Sbjct: 354 LKSMGISVKYDNADNKRPGFKFADYELKGVPVRLVMGGRDLENNTMEVMRRDTLEKETLS 413


>gi|225350874|ref|ZP_03741897.1| hypothetical protein BIFPSEUDO_02448 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225158330|gb|EEG71572.1| hypothetical protein BIFPSEUDO_02448 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 611

 Score = 42.0 bits (97), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 32/139 (23%), Positives = 63/139 (45%), Gaps = 11/139 (7%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK 322
           G+  W   G  +   + + +R ++   D +E++   +L +  ++ +  W+ Y  N+F +K
Sbjct: 42  GIWTWLPLGLNVLNKIENIIREEMASIDAQEVHFSGLLPREPYEATHRWEEYGDNIFRLK 101

Query: 323 CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE--PSGSLHGL 380
              +       + L P +      +      SY++LPV L +  + YR+E  P     GL
Sbjct: 102 DRHEA-----DYLLAPTHEEMFTLLVKDLYSSYKDLPVTLYQIQTKYRDEFRPRA---GL 153

Query: 381 MRVRGFTQDDAHVFCTKEQ 399
           +R R F   DA+ F   ++
Sbjct: 154 IRGREFIMKDAYSFTLDKE 172


>gi|331090444|ref|ZP_08339325.1| hypothetical protein HMPREF1025_02908 [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|330401191|gb|EGG80784.1| hypothetical protein HMPREF1025_02908 [Lachnospiraceae bacterium
           3_1_46FAA]
          Length = 767

 Score = 42.0 bits (97), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 20/67 (29%), Positives = 37/67 (55%), Gaps = 1/67 (1%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEII 62
           D+    P+G +KN P  +T  D A +I  ++  K V   +NGK+ ++   ++ G  IEI+
Sbjct: 423 DVYCFTPNGDVKNLPNGSTPVDFAYAIHSAVGNKMVGARVNGKLVNIDYKIQNGDRIEIL 482

Query: 63  TPEDPRS 69
           T ++ + 
Sbjct: 483 TSQNSKG 489


>gi|294788850|ref|ZP_06754091.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
           [Simonsiella muelleri ATCC 29453]
 gi|294483332|gb|EFG31018.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
           [Simonsiella muelleri ATCC 29453]
          Length = 632

 Score = 42.0 bits (97), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 1/63 (1%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIE 60
           P+D+ +  P G I N P  AT  D A ++   +    +   +NGK   L  P+R G ++E
Sbjct: 396 PADVYVFTPKGEIINLPRGATVIDFAYNVHTKIGNHCMGGKVNGKSMSLRTPLRSGDTVE 455

Query: 61  IIT 63
           IIT
Sbjct: 456 IIT 458


>gi|317155666|ref|XP_001825276.2| prolyl-tRNA synthetase [Aspergillus oryzae RIB40]
          Length = 627

 Score = 42.0 bits (97), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 31/118 (26%), Positives = 50/118 (42%), Gaps = 8/118 (6%)

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           Q LW++SG      + +F      ++      F L P +      +     KSYR+LP+R
Sbjct: 118 QELWERSGRLGE-GSEVFKFHDRKES-----RFLLAPTHEEEITTLVGSLAKSYRDLPLR 171

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDF 418
           + +    YR+EP     GL+R R F   D + F CT E+       +      ++ D 
Sbjct: 172 VYQISRKYRDEPR-PRQGLLRGREFIMKDLYTFDCTVEEALETYTSVKAAYTRLFNDL 228


>gi|229496595|ref|ZP_04390309.1| alanyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406]
 gi|229316492|gb|EEN82411.1| alanyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406]
          Length = 873

 Score = 42.0 bits (97), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 34/148 (22%), Positives = 65/148 (43%), Gaps = 10/148 (6%)

Query: 51  SDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFD 109
           +DP +    EI   ++ R +A   H+  H++ +A++ +  E     G  +  +   +DF 
Sbjct: 539 NDPGQTFRAEI--DQERRRMAEANHTATHLLHQALRMVLGEHVEQKGSFVSPEVLRFDFS 596

Query: 110 KEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKE 169
                + +E+ Q+E+ + + +  D P        E+ R +  ++  A     L      E
Sbjct: 597 HYNKLTPEEIRQVEELVTQAVRADYP-------REEHRNIPIAEARAMGAMALFGEKYGE 649

Query: 170 NVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
            V + + G   +LC G HV STG +  F
Sbjct: 650 EVRVMKYGTSIELCGGTHVPSTGMIGAF 677


>gi|322379566|ref|ZP_08053903.1| prolyl-tRNA synthetase [Helicobacter suis HS1]
 gi|321147960|gb|EFX42523.1| prolyl-tRNA synthetase [Helicobacter suis HS1]
          Length = 576

 Score = 42.0 bits (97), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 38/161 (23%), Positives = 70/161 (43%), Gaps = 11/161 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I + GSG+  +   G K+   + + ++ ++ K   +E     +    LW+QS     Y  
Sbjct: 32  IKQIGSGIYSFLPLGQKVLSKIKNIIKEEMDKHGAQECMFNFITPASLWEQSKRLHKYGQ 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            +   K   +       F L P +    V V    ++SY++LP+ L +  + +R+E    
Sbjct: 92  ELLVFKDRKNY-----PFVLGPTHEEVAVEVVKGFVQSYKQLPLHLYQIHTKFRDEIRPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTK----EQMFNECLKIHNLIIS 413
             GLMR R F   D + F       E+ FN   ++++ I +
Sbjct: 147 F-GLMRAREFIMKDGYSFHVSTQDLEREFNAMEQVYSRIFT 186


>gi|241668454|ref|ZP_04756032.1| alanyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254876987|ref|ZP_05249697.1| alanyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254843008|gb|EET21422.1| alanyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 865

 Score = 42.0 bits (97), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 35/140 (25%), Positives = 61/140 (43%), Gaps = 11/140 (7%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSDELAQIEKKM 126
           R      HS  H++ +A++ +        G +++D    +DF  ++  S  E+ QIE  +
Sbjct: 547 RLATAANHSATHLLHKALKIVLGSHAEQKGSLVDDNKLRFDFTHDKAISRVEIEQIETLV 606

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRG 185
            + I  + P      S EKA+ L          E L      + V +   G++  +LC G
Sbjct: 607 NQQIRANYPVATIETSQEKAKSL--------GAEALFGEKYGDIVRVISMGDFSIELCGG 658

Query: 186 PHVRSTGQVKKFFKLMKVAG 205
            HV  TG +   FK++  +G
Sbjct: 659 THVAYTGDI-GLFKIVSESG 677


>gi|238498424|ref|XP_002380447.1| prolyl-tRNA synthetase [Aspergillus flavus NRRL3357]
 gi|220693721|gb|EED50066.1| prolyl-tRNA synthetase [Aspergillus flavus NRRL3357]
          Length = 627

 Score = 42.0 bits (97), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 31/118 (26%), Positives = 50/118 (42%), Gaps = 8/118 (6%)

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           Q LW++SG      + +F      ++      F L P +      +     KSYR+LP+R
Sbjct: 118 QELWERSGRLGE-GSEVFKFHDRKES-----RFLLAPTHEEEITTLVGSLAKSYRDLPLR 171

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDF 418
           + +    YR+EP     GL+R R F   D + F CT E+       +      ++ D 
Sbjct: 172 VYQISRKYRDEPR-PRQGLLRGREFIMKDLYTFDCTVEEALETYTSVKAAYTRLFNDL 228


>gi|195053792|ref|XP_001993810.1| GH19144 [Drosophila grimshawi]
 gi|193895680|gb|EDV94546.1| GH19144 [Drosophila grimshawi]
          Length = 436

 Score = 42.0 bits (97), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 53/222 (23%), Positives = 94/222 (42%), Gaps = 23/222 (10%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDG--SGVIFWHRKGWKIF--QTLISYMRRKI-KDDYEE 293
           E+   ++   LAR ++L+ +   G  +G   ++  G      Q +I Y  + I +  ++ 
Sbjct: 125 EQGVAKEFSDLARALNLYRMDHLGNYTGHKSYYLTGQLAMMEQAIIQYALQSITRQGFKL 184

Query: 294 INTPQVLDQHLWQQSG-HWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           I+ P +L +++ +  G   +  R  ++ +   +  +      AL           F    
Sbjct: 185 ISVPDILPRNIIEACGMRTEGERTQVYKLDTGE-CLSGTSEMAL--------AGFFAQRQ 235

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLH---GLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
            + +ELPV++A     YR E SG LH   G+ RV  FT+ +     T EQ      +  N
Sbjct: 236 LAEQELPVKVAAVSRCYRAETSG-LHEEKGIYRVHQFTKVEMFAIATPEQSEQILEQFKN 294

Query: 410 LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWD-DAENIMKG 450
             I+++K  G   I  +L   P   +G+ A    D E  M G
Sbjct: 295 TEIALFKQLG---INFRLLDMPPCELGAPAYQKYDIEAWMPG 333


>gi|329767542|ref|ZP_08259065.1| prolyl-tRNA synthetase [Gemella haemolysans M341]
 gi|328835876|gb|EGF85598.1| prolyl-tRNA synthetase [Gemella haemolysans M341]
          Length = 566

 Score = 42.0 bits (97), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 31/133 (23%), Positives = 60/133 (45%), Gaps = 11/133 (8%)

Query: 279 LISYMRRKIKDDYEEINTPQVL-----DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           +I  + + I++++E+I   ++L         W++SG W+     +  V     T +    
Sbjct: 49  VIQKIEKVIREEHEKIGAVELLMPILQSDEYWKKSGRWNKMGDELIRV-----TDRKNAG 103

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
           +AL P          ++ + SY++LPV L +  + +R+E    L GL+R + F   D + 
Sbjct: 104 YALSPTAEEIICQTVSNMVTSYKQLPVNLYQIQTKFRDEIRPRL-GLLRCKEFIMKDGYS 162

Query: 394 FCTKEQMFNECLK 406
           F    +   E  K
Sbjct: 163 FHDTPESLRETYK 175


>gi|242069129|ref|XP_002449841.1| hypothetical protein SORBIDRAFT_05g024270 [Sorghum bicolor]
 gi|241935684|gb|EES08829.1| hypothetical protein SORBIDRAFT_05g024270 [Sorghum bicolor]
          Length = 514

 Score = 42.0 bits (97), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 41/183 (22%), Positives = 83/183 (45%), Gaps = 19/183 (10%)

Query: 244 RDHRKLAREMDLFHI--AEDGSGVIFWHRKGWKIF--QTLISYMRRKI-KDDYEEINTPQ 298
           +DH +L +E+DLF    A + SG  F++ K   +     L+++   ++ K  +  + TP+
Sbjct: 209 KDHLQLGKELDLFDFDAAAEVSGSKFYYLKNEAVLLEMALVNWAISEVSKKGFTPLITPE 268

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++   + ++ G     RA    V   +D+ + L   A  P+       +    + +   L
Sbjct: 269 IVRSSVVEKCGFQP--RAQNTQVYSIEDSDQCLIGTAEIPVG-----GIHMDSILAESAL 321

Query: 359 PVRLAEFGSVYRNE---PSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           P++   +   +R E      +  GL RV  F++ +  +FC      +E  K+H  +I+I 
Sbjct: 322 PLKYVAYSHCFRTEAGAAGAATRGLYRVHQFSKVEMFIFCRP----DESDKLHEELITIE 377

Query: 416 KDF 418
           +D 
Sbjct: 378 EDL 380


>gi|240850806|ref|YP_002972206.1| alanyl-tRNA synthetase [Bartonella grahamii as4aup]
 gi|240267929|gb|ACS51517.1| alanyl-tRNA synthetase [Bartonella grahamii as4aup]
          Length = 890

 Score = 42.0 bits (97), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 10/127 (7%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++ EA++ +        G ++  D   +DF   +  S +EL +IE    EII ++
Sbjct: 564 HSATHLLHEALRQVLGSHVTQKGSLVSPDRLRFDFSHPKSVSPEELKKIEDLANEIILQN 623

Query: 134 SPFLKQYLS-----HEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPH 187
           S  + + ++      E A  LF  +K   +V ++      E   L +   W  +LC G H
Sbjct: 624 SRVITRLMAVDDAISEGAMALF-GEKYGDEVRVVSMGEPLEQRRLKKH--WSIELCGGTH 680

Query: 188 VRSTGQV 194
           V  TG +
Sbjct: 681 VERTGDI 687


>gi|311259273|ref|XP_003128020.1| PREDICTED: probable prolyl-tRNA synthetase, mitochondrial-like [Sus
           scrofa]
          Length = 472

 Score = 42.0 bits (97), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 91/447 (20%), Positives = 168/447 (37%), Gaps = 70/447 (15%)

Query: 205 GAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSG 264
           GA  RG   R +LSR++    N +++    L           ++L  ++ L H A  G  
Sbjct: 29  GAPGRG--KRLLLSRVF-QPQNLREDQVLSLEGRPGDLTCKSQRLMLQVGLIHPASPGC- 84

Query: 265 VIFWHRKGWKI--FQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
              +H   + +   + L+  + ++++    +++N P +    LW+ +  WDS    +  +
Sbjct: 85  ---YHLLPYTVRAMEKLVRVVDQEMQAIGGQKVNMPSLSPAELWRATSRWDSMGKELLRL 141

Query: 322 KCADDTIKDLRTFALKPMNCPGHVA-VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           +  D   K+   + L P +     A V +    SY++LPV L +    +R+EP     GL
Sbjct: 142 R--DRHGKE---YCLGPTHEEAITALVASQKTLSYKQLPVLLYQVTRKFRDEPRPRF-GL 195

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKIHNLII----SIYKDFGFEKIMVKLST------- 429
           +R R F   D + F +  +      + ++L+     S++   G + + V+          
Sbjct: 196 LRGREFYMKDMYTFDSSPEAAR---RTYSLVCDAYGSLFDRLGLQCLQVQADVGSIGGTM 252

Query: 430 ----RPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKD 485
               +    VG D L           ++T+     D   T     +G     K       
Sbjct: 253 SHEFQLPVDVGEDRLALCPRCSFSANVETL-----DLAQTNCPACQGPLTETK-----GI 302

Query: 486 AIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK------CHPVMIHRAVFGSIERFIGIMI 539
            +G  +  GT        S FNA + N H +       C+ + + R +  +IE    ++ 
Sbjct: 303 EVGHTFYLGT-----KYSSIFNAQFTNVHGKASLAEMGCYGLGVTRILAAAIE----VLS 353

Query: 540 ENFKGNLPLWLSPIQ-AIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE--------- 589
                  P  L+P Q  ++     S  E A E+   L  H        R E         
Sbjct: 354 AEDCIRWPGLLAPYQVCLIPPKKGSKEEAAAELTGHLYDHITEAVPQLRGEVLLDDRTHL 413

Query: 590 TINYKIREHSIKKIPIIIICGDKEASE 616
           TI  ++++      P +II G +   E
Sbjct: 414 TIGNRLKDADKLGYPFVIIAGKRALDE 440


>gi|224436671|ref|ZP_03657675.1| alanyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
 gi|313143169|ref|ZP_07805362.1| alanyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
 gi|313128200|gb|EFR45817.1| alanyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
          Length = 992

 Score = 42.0 bits (97), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 31/135 (22%), Positives = 60/135 (44%), Gaps = 10/135 (7%)

Query: 66  DPRSLAVIRH-SCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIE 123
           D     +I+H S  H++  A++ I        G ++E +   +DF   +  S ++L QIE
Sbjct: 679 DSSRFEIIKHHSATHLLHYALRQILGSHIAQAGSLVEANRLRFDFSHPKALSVNDLEQIE 738

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
             +   I   SP + + +  ++A+        A     L      E+V +   G+  +LC
Sbjct: 739 ALVNSKITESSPQVCETMGIDQAK--------AKGAMALFGEKYGESVRVITLGDSIELC 790

Query: 184 RGPHVRSTGQVKKFF 198
            G H+ +T ++  F+
Sbjct: 791 GGIHIHNTAEIGSFY 805


>gi|296185456|ref|ZP_06853866.1| alanine--tRNA ligase [Clostridium carboxidivorans P7]
 gi|296050290|gb|EFG89714.1| alanine--tRNA ligase [Clostridium carboxidivorans P7]
          Length = 879

 Score = 42.0 bits (97), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 35/139 (25%), Positives = 68/139 (48%), Gaps = 21/139 (15%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           H+  H++ EA++ +  E     G  ++D    +DF+  +  S +EL ++E  + + I + 
Sbjct: 566 HTATHLLNEALRKVLGEHVHQSGSYVDDERLRFDFNHFEAPSHEELKKVEALVNDEIVKV 625

Query: 134 SPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWF-DLCRGPH 187
                Q +S E+A+E     LF++K              K+ V +   G++  +LC G H
Sbjct: 626 LNVQTQSMSLEEAKETGAIALFDNK-------------YKDEVRVVSVGDFSKELCGGTH 672

Query: 188 VRSTGQVKKFFKLMKVAGA 206
           V ++G++   FK++  AG 
Sbjct: 673 VSNSGEI-GLFKIISEAGV 690


>gi|261366901|ref|ZP_05979784.1| alanine--tRNA ligase [Subdoligranulum variabile DSM 15176]
 gi|282571016|gb|EFB76551.1| alanine--tRNA ligase [Subdoligranulum variabile DSM 15176]
          Length = 886

 Score = 42.0 bits (97), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 38/155 (24%), Positives = 73/155 (47%), Gaps = 12/155 (7%)

Query: 47  VCDLSD-PVREGSIEIITPEDPRSLAVIR-HSCAHIMAEAVQSIWPEVQVAIGPIIEDGF 104
            C+L D  ++ G       ++ R +A+ R H+  H++ +A++ +  E     G   +D  
Sbjct: 541 TCELLDGTIKVGDEVTAFVDEARRMAICRNHTATHLLQKALREVLGEHVHQAGSYQDDKI 600

Query: 105 -YYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE 163
            ++DF      + +EL ++E+++ E I    P + Q L  E+A+++      A   E   
Sbjct: 601 THFDFTHFSAVTPEELTEVERRVNEKIFASLPVVIQNLPIEEAKKM---GAMALFGEKYG 657

Query: 164 SIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
           S+     V +   G W  + C G HV++T Q+  F
Sbjct: 658 SV-----VRVVDAGGWSTEFCGGTHVQNTSQIGCF 687


>gi|317502040|ref|ZP_07960222.1| GTP diphosphokinase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|316896514|gb|EFV18603.1| GTP diphosphokinase [Lachnospiraceae bacterium 8_1_57FAA]
          Length = 774

 Score = 42.0 bits (97), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 20/67 (29%), Positives = 37/67 (55%), Gaps = 1/67 (1%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEII 62
           D+    P+G +KN P  +T  D A +I  ++  K V   +NGK+ ++   ++ G  IEI+
Sbjct: 430 DVYCFTPNGDVKNLPNGSTPVDFAYAIHSAVGNKMVGARVNGKLVNIDYKIQNGDRIEIL 489

Query: 63  TPEDPRS 69
           T ++ + 
Sbjct: 490 TSQNSKG 496


>gi|290961838|ref|YP_003493020.1| alanine tRNA synthetase [Streptomyces scabiei 87.22]
 gi|260651364|emb|CBG74486.1| alanine tRNA synthetase [Streptomyces scabiei 87.22]
          Length = 890

 Score = 42.0 bits (97), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 71/162 (43%), Gaps = 15/162 (9%)

Query: 68  RSLAVIR-HSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSDELAQIEKK 125
           R  A+ R HS  H+  +A++          G   + G F +DF       +  +  +E+K
Sbjct: 565 RRTAIARAHSATHLTHQALRDALGPTAAQAGSENQPGRFRFDFGSPSAVPTAVMTDVEQK 624

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF-DLCR 184
           + E+++RD     + LS      L E+KK+    E  E     E V +   G++  +LC 
Sbjct: 625 INEVLSRDLDVHAEILS------LDEAKKQGAIAEFGEKY--GERVRVVTIGDFSKELCG 676

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWN 226
           G HV +T Q      L+K+ G    G   R + + +   A+N
Sbjct: 677 GTHVHNTSQ----LGLVKLLGESSIGSGVRRIEALVGVDAYN 714


>gi|159900080|ref|YP_001546327.1| prolyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
 gi|226701298|sp|A9B562|SYP_HERA2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|159893119|gb|ABX06199.1| prolyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
          Length = 566

 Score = 42.0 bits (97), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 55/126 (43%), Gaps = 7/126 (5%)

Query: 272 GWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G ++F+ + + M  ++      E  TP V    LW+Q+G +  Y   M          ++
Sbjct: 46  GMRVFRRIEAIMHAELAAIGAGEFRTPVVHAASLWEQTGRYAQYGEAMLRFNN-----RN 100

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
            +     P +      +    + SYR+LP  L +  + YR+E      GL+R+R FT  D
Sbjct: 101 QQALLFAPTHEEAVAELARREVDSYRQLPSLLYQIHTKYRDELR-VRGGLLRLREFTMLD 159

Query: 391 AHVFCT 396
           A+   T
Sbjct: 160 AYSLDT 165


>gi|169831075|ref|YP_001717057.1| alanyl-tRNA synthetase [Candidatus Desulforudis audaxviator MP104C]
 gi|205830046|sp|B1I370|SYA_DESAP RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|169637919|gb|ACA59425.1| alanyl-tRNA synthetase [Candidatus Desulforudis audaxviator MP104C]
          Length = 880

 Score = 42.0 bits (97), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 30/121 (24%), Positives = 55/121 (45%), Gaps = 8/121 (6%)

Query: 75  HSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           H+  H++   ++++    V  A   +  +   +DF   QP S  ELA++E ++ EI+  +
Sbjct: 563 HTATHLLHRTLKAVLGTHVNQAGSLVAPERLRFDFTHIQPLSEAELAEVESRINEIVLSN 622

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQ 193
                   S ++AREL        K   L  +   + V++       +LC G HV ST +
Sbjct: 623 LRVESFQTSFDRARELGAVALFGEKYGDLVRVVQIDGVSM-------ELCGGTHVLSTAE 675

Query: 194 V 194
           +
Sbjct: 676 I 676


>gi|83596048|gb|ABC25406.1| alanyl-tRNA synthetase [uncultured marine bacterium Ant39E11]
          Length = 868

 Score = 42.0 bits (97), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 33/144 (22%), Positives = 61/144 (42%), Gaps = 14/144 (9%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY-YDFDKEQPFSS 116
           +++ +  E  R  +   HS  H++ +A++ I        G  + D +  +DF   Q  ++
Sbjct: 541 AVKAVIDEGKRKASAQNHSATHLLHKALRDILGVHVEQRGSFVSDEYLRFDFSHFQRIAA 600

Query: 117 DELAQIEKKMQEIIARDSP---FLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTL 173
            EL  IE  +   I +D P   F +  +   KA+       E Y           ++V +
Sbjct: 601 KELMAIESHVSTAILQDHPLQEFRESTMEEAKAKGAMALFGEKYG----------DSVRV 650

Query: 174 YRQGEWFDLCRGPHVRSTGQVKKF 197
            + G+  +LC G HV +T  +  F
Sbjct: 651 IQLGDSVELCGGTHVSTTAALSPF 674


>gi|76155685|gb|AAX26970.2| SJCHGC07933 protein [Schistosoma japonicum]
          Length = 118

 Score = 42.0 bits (97), Expect = 0.35,   Method: Composition-based stats.
 Identities = 30/107 (28%), Positives = 54/107 (50%), Gaps = 14/107 (13%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN--CPGHVAVFN 349
           + +  P +  +++W++SG W    +++F ++  D    D   + L+P +  C   +  F 
Sbjct: 18  QRVQLPTLGPRNMWEKSGRWSEMHSSLFKLR--DRLSHD---YCLQPTHEEC---ITSFV 69

Query: 350 HGLK-SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC 395
             LK SY+ LPV L +  S +R+EP    +GL  +RG      H+ C
Sbjct: 70  TSLKLSYKSLPVFLYQITSKFRDEPRPK-NGL--IRGLISRSLHIRC 113


>gi|119025474|ref|YP_909319.1| prolyl-tRNA synthetase [Bifidobacterium adolescentis ATCC 15703]
 gi|152112217|sp|A1A0K4|SYP_BIFAA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|118765058|dbj|BAF39237.1| prolyl-tRNA synthetase [Bifidobacterium adolescentis ATCC 15703]
          Length = 605

 Score = 42.0 bits (97), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 32/139 (23%), Positives = 63/139 (45%), Gaps = 11/139 (7%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK 322
           G+  W   G  +   + + +R ++   D +E++   +L +  ++ +  W+ Y  N+F +K
Sbjct: 36  GIWTWLPLGLNVLNKIENIIREEMASIDAQEVHFSGLLPREPYEATHRWEEYGDNIFRLK 95

Query: 323 CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE--PSGSLHGL 380
              +       + L P +      +      SY++LPV L +  + YR+E  P     GL
Sbjct: 96  DRHEA-----DYLLAPTHEEMFTLLVKDLYSSYKDLPVTLYQIQTKYRDEFRPRA---GL 147

Query: 381 MRVRGFTQDDAHVFCTKEQ 399
           +R R F   DA+ F   ++
Sbjct: 148 IRGREFIMKDAYSFTLDKE 166


>gi|206901044|ref|YP_002250743.1| alanyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
 gi|206740147|gb|ACI19205.1| alanyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
          Length = 866

 Score = 42.0 bits (97), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 46/187 (24%), Positives = 81/187 (43%), Gaps = 15/187 (8%)

Query: 45  GKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCA-HIMAEAVQSIWPEVQVAIGPIIEDG 103
           GKV  L    +EG I     +  +    +RH  A H++  A++       +  G ++   
Sbjct: 529 GKV--LKGEFKEGQIVKAEVDKEKRYHTMRHHTATHLLHSALREYLGTHVMQSGSLVSPE 586

Query: 104 FY-YDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL 162
           F  +DF    P S ++L  IEKK+ E I  +    K + + E+AR +        K +  
Sbjct: 587 FLRFDFTHHSPLSYEDLKIIEKKVNENILANHKVEKFWTTLEEARRMGAIALFTEKYQKN 646

Query: 163 ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYG 222
             +   +N+++       +LC G HV  TG++  F+ ++K  G    G   R + +    
Sbjct: 647 VRVIKIDNISM-------ELCGGTHVDYTGEIGSFY-IVKEEGI---GSGIRRIFAVCGL 695

Query: 223 TAWNTQQ 229
            AW  Q+
Sbjct: 696 KAWEYQK 702


>gi|315924764|ref|ZP_07920981.1| alanine--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263]
 gi|315621663|gb|EFV01627.1| alanine--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263]
          Length = 882

 Score = 42.0 bits (97), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 44/195 (22%), Positives = 85/195 (43%), Gaps = 30/195 (15%)

Query: 75  HSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           H+  H++ +A++ +  + V+ A   +  D   +DF+  QP +++E+A++E  + ++I   
Sbjct: 569 HTATHMLQKALKQVLGDHVEQAGSFVSPDRLRFDFNHFQPMTAEEIARVETIVNQVILEA 628

Query: 134 SPFLKQYLSHEKARELFESK-KEAYKVEILESIPAKEN--VTLYRQGEW-FDLCRGPHVR 189
            P             +FE+   EA K+  +     K    V + R G++  +LC G H+ 
Sbjct: 629 MPVT-----------IFETDIDEAKKLGAMALFGEKYGNIVRVVRVGDYSIELCGGTHLT 677

Query: 190 STGQVKKFFKLMK--VAGAYWRGDSNRPM------------LSRIYGTAWNTQQELTQYL 235
           +  Q   F  L +  VA    R ++   M            L ++ G       +L + +
Sbjct: 678 NAAQAGMFKILSESGVAAGIRRIEAATGMNTYHEMARAEATLRKVSGMVKANPAQLVEKI 737

Query: 236 YFLEESEKRDHRKLA 250
             LEE  K   R++A
Sbjct: 738 AELEEQGKAQDREIA 752


>gi|312884640|ref|ZP_07744343.1| alanyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309367732|gb|EFP95281.1| alanyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 860

 Score = 42.0 bits (97), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 35/162 (21%), Positives = 71/162 (43%), Gaps = 37/162 (22%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSD 117
           +E +  +  R+   + HS  H++  A++ +  E     G +++ D   +DF   +  ++D
Sbjct: 547 VEALVDKGRRNAISLNHSATHLLHAALRKVLGEHVTQKGSLVKADNLRFDFSHLEAMTAD 606

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           E+ Q+E+ + + +          L+H+   ++ +          +ES  +K  + L+  G
Sbjct: 607 EIKQVERLVNDHV---------RLNHDVETDIMD----------IESAKSKGAMALF--G 645

Query: 178 EWFD--------------LCRGPHVRSTGQVKKFFKLMKVAG 205
           E +D              LC G HV STG +   FK+   +G
Sbjct: 646 EKYDDQVRVLSMGDFSTELCGGIHVSSTGDI-GLFKITSESG 686


>gi|219847052|ref|YP_002461485.1| alanyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
 gi|219541311|gb|ACL23049.1| alanyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
          Length = 894

 Score = 42.0 bits (97), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 33/134 (24%), Positives = 61/134 (45%), Gaps = 9/134 (6%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           H+  H++  A++ +  E     G ++  D   +DF   +P   +EL +IE+++   +  D
Sbjct: 569 HTATHMLQRALRDVLGEHAAQAGSLVAPDRLRFDFTHTKPLDPEELREIERRLNAWVRAD 628

Query: 134 SPF---LKQYLS--HEKARELFESK-KEAYKVEILESIPAKENVTLYRQGEWFDLCRGPH 187
           +     +  Y S     A  LF  K  +  +V  +E     EN   Y   +  +LC G H
Sbjct: 629 ASVRWEITGYRSAIARGAIALFGEKYGDTVRVVTIERGTGIENGE-YASRDSLELCGGTH 687

Query: 188 VRSTGQVKKFFKLM 201
           V  TG++  F +++
Sbjct: 688 VNRTGEI-GFVRIL 700


>gi|77554944|gb|ABA97740.1| Bifunctional aminoacyl-tRNA synthetase, putative, expressed [Oryza
           sativa Japonica Group]
          Length = 489

 Score = 42.0 bits (97), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 2/85 (2%)

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV- 393
           A++P +       F+  ++S+R+LP+R  ++ +V R E S      +R R F   + H  
Sbjct: 130 AIRPTSETVMYPYFSKWIRSHRDLPLRCNQWCNVVRWEFSNPTP-FIRSREFLWQEGHTA 188

Query: 394 FCTKEQMFNECLKIHNLIISIYKDF 418
           F TKE+   E L+I  L   IY++F
Sbjct: 189 FATKEEADEEVLQILELYRRIYEEF 213


>gi|315187025|gb|EFU20782.1| alanyl-tRNA synthetase [Spirochaeta thermophila DSM 6578]
          Length = 603

 Score = 42.0 bits (97), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 29/125 (23%), Positives = 62/125 (49%), Gaps = 10/125 (8%)

Query: 75  HSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           H+  H++ +A++ +  P VQ     I  +   +DF      + +++ ++E+ + + I  D
Sbjct: 459 HTATHLLHQALRIVLGPHVQQKGSNITPERLRFDFSHPDKLTPEQIRKVEEIVNQKIKED 518

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF-DLCRGPHVRSTG 192
            P   + ++ E+A+   E    A+  +  +     E V +Y  G++  ++C GPHV  TG
Sbjct: 519 LPVTMEVMTLEEAK---EKGAIAFFTDRYD-----EKVKVYSVGDFSKEVCGGPHVERTG 570

Query: 193 QVKKF 197
            + +F
Sbjct: 571 VLGRF 575


>gi|134076914|emb|CAK45323.1| unnamed protein product [Aspergillus niger]
          Length = 497

 Score = 42.0 bits (97), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 7/93 (7%)

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           Q LW+QSG      + +F  +   ++      F L P +      +  H  KSYR+LPVR
Sbjct: 36  QELWEQSGRLKE-GSEIFRFQDRKES-----RFLLAPTHEEEITTLVGHLTKSYRDLPVR 89

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           + +    YR+E      GL+R R F   D + F
Sbjct: 90  VYQISRKYRDEQR-PRQGLLRGREFIMKDLYTF 121


>gi|283455556|ref|YP_003360120.1| proS Prolyl-tRNA synthetase [Bifidobacterium dentium Bd1]
 gi|283102190|gb|ADB09296.1| proS Prolyl-tRNA synthetase [Bifidobacterium dentium Bd1]
          Length = 605

 Score = 41.6 bits (96), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 32/139 (23%), Positives = 63/139 (45%), Gaps = 11/139 (7%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK 322
           G+  W   G  +   + + +R ++   D +E++   +L +  ++ +  W+ Y  N+F +K
Sbjct: 36  GIWTWLPLGLTVLNKIENIIREEMASIDAQEVHFSGLLPREPYEATHRWEEYGDNIFRLK 95

Query: 323 CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE--PSGSLHGL 380
              +       + L P +      +      SY++LPV L +  + YR+E  P     GL
Sbjct: 96  DRHEA-----DYLLAPTHEEMFTLLVKDLYSSYKDLPVTLYQIQTKYRDEFRPRA---GL 147

Query: 381 MRVRGFTQDDAHVFCTKEQ 399
           +R R F   DA+ F   ++
Sbjct: 148 IRGREFIMKDAYSFTLDKE 166


>gi|237716484|ref|ZP_04546965.1| prolyl-tRNA synthetase [Bacteroides sp. D1]
 gi|255691705|ref|ZP_05415380.1| proline--tRNA ligase [Bacteroides finegoldii DSM 17565]
 gi|262408082|ref|ZP_06084630.1| prolyl-tRNA synthetase [Bacteroides sp. 2_1_22]
 gi|294809476|ref|ZP_06768179.1| proline--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
 gi|298484158|ref|ZP_07002324.1| proline--tRNA ligase [Bacteroides sp. D22]
 gi|299145587|ref|ZP_07038655.1| proline--tRNA ligase [Bacteroides sp. 3_1_23]
 gi|229444131|gb|EEO49922.1| prolyl-tRNA synthetase [Bacteroides sp. D1]
 gi|260622644|gb|EEX45515.1| proline--tRNA ligase [Bacteroides finegoldii DSM 17565]
 gi|262354890|gb|EEZ03982.1| prolyl-tRNA synthetase [Bacteroides sp. 2_1_22]
 gi|294443294|gb|EFG12058.1| proline--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
 gi|295084169|emb|CBK65692.1| prolyl-tRNA synthetase [Bacteroides xylanisolvens XB1A]
 gi|298269662|gb|EFI11257.1| proline--tRNA ligase [Bacteroides sp. D22]
 gi|298516078|gb|EFI39959.1| proline--tRNA ligase [Bacteroides sp. 3_1_23]
          Length = 497

 Score = 41.6 bits (96), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 63/300 (21%), Positives = 128/300 (42%), Gaps = 56/300 (18%)

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECL 405
            + + ++SYR+LP+   ++ +V+R E    L   +R   F   + H    T+E+   E +
Sbjct: 134 TYKNWIQSYRDLPILCNQWANVFRWEMRTRL--FLRTAEFLWQEGHTAHATREEAEEEAI 191

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
           ++ N    +Y +F  EK M                   A  ++KGV      S+ +R   
Sbjct: 192 RMLN----VYGEFA-EKYM-------------------AVPVVKGV-----KSANERF-- 220

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIH 524
                 GA      E +++D  G+  Q GT   +  N    F+  +VN  ++  +   + 
Sbjct: 221 -----AGALDTYTIEAMMQD--GKALQSGTSHFLGQNFAKAFDVQFVNKENKLEY---VW 270

Query: 525 RAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTITSSAVEYAQEIANL------ 574
              +G   R +G +I     +    LP  L+PIQ ++  I  +  +  Q  A +      
Sbjct: 271 ATSWGVSTRLMGALIMTHSDDNGLVLPPHLAPIQVVIVPIYKNDEQLKQIDAKVEGIVAK 330

Query: 575 LKSHHLSIETD-FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
           LK+  +S++ D   N+   +K  ++ +K +P+ ++ G ++    ++ + R  +   + V+
Sbjct: 331 LKALGISVKYDNADNKRPGFKFADYELKGVPVRLVMGGRDLENNTMEVMRRDTLEKETVT 390


>gi|332981924|ref|YP_004463365.1| alanyl-tRNA synthetase [Mahella australiensis 50-1 BON]
 gi|332699602|gb|AEE96543.1| alanyl-tRNA synthetase [Mahella australiensis 50-1 BON]
          Length = 883

 Score = 41.6 bits (96), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 79/162 (48%), Gaps = 25/162 (15%)

Query: 56  EGSIEI-----ITPEDPRSLAVIR-HSCAHIMAEAVQ-SIWPEVQVAIGPIIEDGFYYDF 108
           EGS+ +      T ++ R +A  R H+  H++ +A++ ++   V+ A   +  D   +DF
Sbjct: 541 EGSLAVGDKVHATVDEERRMATARNHTATHLLHKALRDTLGAHVEQAGSLVTPDRLRFDF 600

Query: 109 DKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILE 163
               P +  EL ++E ++ + I  D     + ++ E+AR+     LF+ +K   KV ++ 
Sbjct: 601 SHFAPMTQQELDRVEYEVNKHILDDLEVTIEEMAIEEARKTGAMALFD-EKYGDKVRVV- 658

Query: 164 SIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAG 205
           SI A             +LC G H++ TGQ    FK++  +G
Sbjct: 659 SIDAYSK----------ELCGGTHLKRTGQA-GLFKIISESG 689


>gi|291549196|emb|CBL25458.1| (p)ppGpp synthetase, RelA/SpoT family [Ruminococcus torques L2-14]
          Length = 773

 Score = 41.6 bits (96), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 20/67 (29%), Positives = 37/67 (55%), Gaps = 1/67 (1%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEII 62
           D+    P+G +KN P  +T  D A +I  ++  K V   +NGK+ ++   ++ G  IEI+
Sbjct: 430 DVYCFTPNGDVKNLPNGSTPVDFAYAIHSAVGNKMVGARVNGKLVNIDYKIQNGDRIEIL 489

Query: 63  TPEDPRS 69
           T ++ + 
Sbjct: 490 TSQNSKG 496


>gi|302925353|ref|XP_003054078.1| hypothetical protein NECHADRAFT_89892 [Nectria haematococca mpVI
           77-13-4]
 gi|256735019|gb|EEU48365.1| hypothetical protein NECHADRAFT_89892 [Nectria haematococca mpVI
           77-13-4]
          Length = 548

 Score = 41.6 bits (96), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 53/117 (45%), Gaps = 9/117 (7%)

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW++S   D     +F  + AD   +      L P +      +    LKSY++LP+R
Sbjct: 58  EELWRRSDRLDRVAPELF--RLAD---RKEVPLILSPTHEEEITTLVAGTLKSYKDLPIR 112

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           L +    YR+E     HGL+R R F   D + F   +      ++ + L+ + Y+ F
Sbjct: 113 LYQITRKYRDE-RRPRHGLLRSREFLMKDLYTF---DLTTAAAIETYRLVSAAYRAF 165


>gi|258446862|ref|ZP_05695016.1| alanyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|257854437|gb|EEV77386.1| alanyl-tRNA synthetase [Staphylococcus aureus A6300]
          Length = 876

 Score = 41.6 bits (96), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 34/133 (25%), Positives = 63/133 (47%), Gaps = 9/133 (6%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++  A++S+  +     G ++E D   +DF    P ++DE+ Q+E+ + E I + 
Sbjct: 565 HSATHLLHAALKSVLGDHVNQAGSLVEADRLRFDFSHFGPMTNDEIDQVERLVNEEIWKG 624

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQ 193
                Q +    A+E+      A   E    +    N+ L+      +LC G HVR+T +
Sbjct: 625 IDVNIQEMDIASAKEM---GAMALFGEKYGDVVRVVNMALFS----IELCGGIHVRNTSE 677

Query: 194 VKKFFKLMKVAGA 206
           +   FK++  +G 
Sbjct: 678 I-GLFKIVSESGT 689


>gi|58337885|ref|YP_194470.1| seryl-tRNA synthetase [Lactobacillus acidophilus NCFM]
 gi|67461604|sp|Q5FIN5|SYS_LACAC RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|58255202|gb|AAV43439.1| seryl-tRNA synthetase [Lactobacillus acidophilus NCFM]
          Length = 435

 Score = 41.6 bits (96), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 32/151 (21%), Positives = 65/151 (43%), Gaps = 4/151 (2%)

Query: 282 YMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           ++    KD Y EI  P +++    Q +G +  +  +++ +   DD  K  R   L P   
Sbjct: 181 FLDENTKDGYTEIIPPYLVNDASMQGTGQFPKFHEDVYTIVDNDDPDKP-RDLTLIPTAE 239

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKE 398
              V  F + +    +LP+ +      +R+E   +     GL+R+  F + +    C  +
Sbjct: 240 VPLVNYFRNEIIHENKLPINVTAMSPAFRSEAGSAGRDTRGLIRMHEFRKVEMVKICKPD 299

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
           + ++E  K+ +    + +  G    +V LST
Sbjct: 300 ESWDELEKLTHNAEHLLQKLGLPYHVVALST 330


>gi|28198031|ref|NP_778345.1| alanyl-tRNA synthetase [Xylella fastidiosa Temecula1]
 gi|182680658|ref|YP_001828818.1| alanyl-tRNA synthetase [Xylella fastidiosa M23]
 gi|32130077|sp|Q87F43|SYA_XYLFT RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|205830289|sp|B2I6K2|SYA_XYLF2 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|28056091|gb|AAO27994.1| alanyl-tRNA synthetase [Xylella fastidiosa Temecula1]
 gi|182630768|gb|ACB91544.1| alanyl-tRNA synthetase [Xylella fastidiosa M23]
 gi|307579119|gb|ADN63088.1| alanyl-tRNA synthetase [Xylella fastidiosa subsp. fastidiosa GB514]
          Length = 884

 Score = 41.6 bits (96), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 31/144 (21%), Positives = 63/144 (43%), Gaps = 20/144 (13%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKM 126
           R +  + HS  H++  A++S++    V  G ++  D   +DF   +P S+ ++  IE+ +
Sbjct: 565 RKMVALNHSATHLLHCALRSVFGTHVVQKGSLVAPDRLRFDFSHFEPISAAQMTLIERMV 624

Query: 127 QEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
            + +  +   + + +  + A +     LF  K               E+V +   G   +
Sbjct: 625 NDEVRANHLVMIEQMGMQAALDAGAMALFGEKY-------------GEHVRVVTMGTSVE 671

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAG 205
           LC G H+  TG +   FK++   G
Sbjct: 672 LCGGTHITRTGDI-GLFKIISECG 694


>gi|298243740|ref|ZP_06967547.1| alanyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
 gi|297556794|gb|EFH90658.1| alanyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
          Length = 880

 Score = 41.6 bits (96), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 31/133 (23%), Positives = 59/133 (44%), Gaps = 9/133 (6%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++ +A++ +        G ++E +   +DF  ++  ++DELAQI+ ++   I  D
Sbjct: 567 HSATHLLHKALRDLLGTQVEQRGSLVEPERLRFDFSSQRGLTTDELAQIDAQVNRWIRAD 626

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQ 193
            P     +  ++A           K + L        V +   G   +LC G H  STGQ
Sbjct: 627 YPVDTTIMPIQEALATGAMALFGEKYDDL--------VRVVSMGSSTELCGGTHCASTGQ 678

Query: 194 VKKFFKLMKVAGA 206
           +  +  + + + A
Sbjct: 679 IGLYLTVQETSVA 691


>gi|218132940|ref|ZP_03461744.1| hypothetical protein BACPEC_00801 [Bacteroides pectinophilus ATCC
           43243]
 gi|217991813|gb|EEC57817.1| hypothetical protein BACPEC_00801 [Bacteroides pectinophilus ATCC
           43243]
          Length = 776

 Score = 41.6 bits (96), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 1/60 (1%)

Query: 10  PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPEDPR 68
           P G +KN P  +T  D A SI  ++  K V   +NGK+  +   ++ G  IEIIT ++ +
Sbjct: 440 PTGDVKNLPTGSTPIDFAYSIHTAVGNKMVGARVNGKLVTIDYQIKNGDRIEIITSQNSK 499


>gi|332971217|gb|EGK10180.1| serine--tRNA ligase [Desmospora sp. 8437]
          Length = 432

 Score = 41.6 bits (96), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 74/173 (42%), Gaps = 19/173 (10%)

Query: 242 EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMR--RKIKDDYEEIN 295
           E + H +LA E+D+          GS  +F+   G ++ + L +YM      K+ Y E+ 
Sbjct: 142 EPKPHWELATELDILDFERAAKVTGSRFVFYKGAGARLERALFNYMLDLHTEKNGYTEMI 201

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG-LKS 354
            P ++++     +G    +  + FAV   D        + +     P  V  F+ G + S
Sbjct: 202 PPYMVNRDSMTGTGQLPKFAEDSFAVADTD-------YYLIPTAEVP--VTNFHRGEILS 252

Query: 355 YRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             ELPV+ A F + +R+E   +     GL+R   F + +       E  ++E 
Sbjct: 253 AAELPVKYAGFSANFRSEAGSAGRDTRGLIRTHQFNKVELVKLVKPEDSYDEL 305


>gi|329961902|ref|ZP_08299915.1| alanine--tRNA ligase [Bacteroides fluxus YIT 12057]
 gi|328531125|gb|EGF57975.1| alanine--tRNA ligase [Bacteroides fluxus YIT 12057]
          Length = 873

 Score = 41.6 bits (96), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 33/132 (25%), Positives = 60/132 (45%), Gaps = 12/132 (9%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEK 124
           D R+     HSC H++  A++ +  +     G ++  D   +DF   Q  + +E+ Q+E 
Sbjct: 554 DKRAACAANHSCTHLLDAALREVLGDHVEQKGSLVTPDSLRFDFSHFQKVTDEEIRQVEH 613

Query: 125 KMQEIIARDSPFLKQY--LSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
            +   I  + P LK+Y  +  E+A+EL            L      ++V + + G   + 
Sbjct: 614 IVNAKIRANIP-LKEYRNIPIEEAKEL--------GAIALFGEKYGDHVRVIQFGSSIEF 664

Query: 183 CRGPHVRSTGQV 194
           C G HV +TG +
Sbjct: 665 CGGTHVAATGNI 676


>gi|224063277|ref|XP_002301073.1| predicted protein [Populus trichocarpa]
 gi|222842799|gb|EEE80346.1| predicted protein [Populus trichocarpa]
          Length = 523

 Score = 41.6 bits (96), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 41/183 (22%), Positives = 79/183 (43%), Gaps = 19/183 (10%)

Query: 244 RDHRKLAREMDLFHI--AEDGSGVIFWHRKGWKIF--QTLISY-MRRKIKDDYEEINTPQ 298
           RDH +L +E+DLF    A + SG  F++ K   +     L+++ +   +K  +  + TP+
Sbjct: 221 RDHLQLGKELDLFDFDAAAEVSGSKFYYLKNEAVMLEMALVNWTLSEVMKKGFTPLTTPE 280

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++   + ++ G     R +   V   + + + L   A  P+       +    + +  +L
Sbjct: 281 LVRSSVVEKCGFQP--RGDNTQVYSIEGSDQCLIGTAEIPVG-----GIHMDAILAETQL 333

Query: 359 PVRLAEFGSVYRNEPSG---SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           P++   +   +R E      +  GL RV  FT+ +  V C  E    E    H  +I I 
Sbjct: 334 PLKYVAYSHCFRTEAGAAGTATRGLYRVHQFTKVEMFVLCRPE----ESDSYHEELIKIE 389

Query: 416 KDF 418
           +D 
Sbjct: 390 EDL 392


>gi|171741061|ref|ZP_02916868.1| hypothetical protein BIFDEN_00127 [Bifidobacterium dentium ATCC
           27678]
 gi|171276675|gb|EDT44336.1| hypothetical protein BIFDEN_00127 [Bifidobacterium dentium ATCC
           27678]
          Length = 611

 Score = 41.6 bits (96), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 32/139 (23%), Positives = 63/139 (45%), Gaps = 11/139 (7%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK 322
           G+  W   G  +   + + +R ++   D +E++   +L +  ++ +  W+ Y  N+F +K
Sbjct: 42  GIWTWLPLGLTVLNKIENIIREEMASIDAQEVHFSGLLPREPYEATHRWEEYGDNIFRLK 101

Query: 323 CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE--PSGSLHGL 380
              +       + L P +      +      SY++LPV L +  + YR+E  P     GL
Sbjct: 102 DRHEA-----DYLLAPTHEEMFTLLVKDLYSSYKDLPVTLYQIQTKYRDEFRPRA---GL 153

Query: 381 MRVRGFTQDDAHVFCTKEQ 399
           +R R F   DA+ F   ++
Sbjct: 154 IRGREFIMKDAYSFTLDKE 172


>gi|114569559|ref|YP_756239.1| alanyl-tRNA synthetase [Maricaulis maris MCS10]
 gi|122316388|sp|Q0AQY6|SYA_MARMM RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|114340021|gb|ABI65301.1| alanyl-tRNA synthetase [Maricaulis maris MCS10]
          Length = 884

 Score = 41.6 bits (96), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 37/152 (24%), Positives = 67/152 (44%), Gaps = 19/152 (12%)

Query: 57  GSIEIITPEDPRSLAV-IRHSCAHIMAEAVQSIW----PEVQVAIGPIIEDGFYYDFDKE 111
           G +  +  + PR  A+   HS  H+   A++ +      +    +GP   D   +DF   
Sbjct: 546 GDVAALDADAPRRAAIRANHSATHLAHAALRDVLGAHVTQKGSHVGP---DRLRFDFSHN 602

Query: 112 QPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIP 166
           +  S+D++A IE ++  +I ++ P   + ++ + A E     LF  +K    V +L    
Sbjct: 603 KSVSADQIAAIEAQVNAVIRQNVPVSTREMTPDAAIEAGALALF-GEKYGDTVRVLAMGQ 661

Query: 167 A-KENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
              ++ T Y      +LC G HV  TG +  F
Sbjct: 662 GLADHATPYS----VELCGGTHVERTGDIALF 689


>gi|224035863|gb|ACN37007.1| unknown [Zea mays]
          Length = 383

 Score = 41.6 bits (96), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 42/183 (22%), Positives = 82/183 (44%), Gaps = 19/183 (10%)

Query: 244 RDHRKLAREMDLFHI--AEDGSGVIFWHRKGWKIF--QTLISYMRRKI-KDDYEEINTPQ 298
           +DH +L +E+DLF    A + SG  F++ K   +     L+++   ++ K  +  + TP+
Sbjct: 78  KDHLQLGKELDLFDFDAAAEVSGSKFYYLKNEAVLLEMALVNWAISEVSKKGFTPLITPE 137

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++   + ++ G     RA    V   +D+ + L   A  P+       +    + +   L
Sbjct: 138 IVRSSVVEKCGFQP--RAKNTQVYSIEDSDQCLIGTAEIPVG-----GIHMDSILAESAL 190

Query: 359 PVRLAEFGSVYRNE---PSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           P++   +   +R E      +  GL RV  F++ +  +FC  E    E  K H  +I+I 
Sbjct: 191 PLKYVAYSHCFRTEAGAAGAATRGLYRVHQFSKVEMFIFCRPE----ESGKWHEELITIE 246

Query: 416 KDF 418
           +D 
Sbjct: 247 EDL 249


>gi|195440008|ref|XP_002067851.1| GK12501 [Drosophila willistoni]
 gi|194163936|gb|EDW78837.1| GK12501 [Drosophila willistoni]
          Length = 461

 Score = 41.6 bits (96), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 32/135 (23%), Positives = 63/135 (46%), Gaps = 11/135 (8%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           ++I  P +    LW++SG  +   +  + V+      +  + F + P +     A+    
Sbjct: 74  QKITLPVLTSTALWKKSGRLEGDISEFYMVR-----DRSGKQFLMSPTHEEAVTAMLATA 128

Query: 352 LK-SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
              SYR+LP+RL + G  +R+E   S  G+MR + F   D + F   ++   +    +++
Sbjct: 129 APISYRQLPLRLYQIGPKFRDELK-SRFGMMRAKEFLMKDMYTFDLSQETAKD---TYDI 184

Query: 411 IISIYKDFGFEKIMV 425
           I   Y  F F+++ V
Sbjct: 185 ITKAYDRF-FQQLEV 198


>gi|162147971|ref|YP_001602432.1| alanyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
 gi|209542589|ref|YP_002274818.1| alanyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
 gi|161786548|emb|CAP56130.1| Alanyl-tRNA synthetase (Alanine--tRNA ligase) (AlaRS)
           [Gluconacetobacter diazotrophicus PAl 5]
 gi|209530266|gb|ACI50203.1| alanyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
          Length = 881

 Score = 41.6 bits (96), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 39/159 (24%), Positives = 66/159 (41%), Gaps = 13/159 (8%)

Query: 54  VREG-SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPI-IEDGFYYDFDKE 111
           VR G ++      D RS     HS  H++ EA++          G +   D   +D  + 
Sbjct: 542 VRVGQAVTATVDHDRRSAIRAHHSATHLLHEALRRRLGAHVTQKGSLNAPDRLRFDISQP 601

Query: 112 QPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEK-----ARELFESKKEAYKVEILESIP 166
           +P + +E+A +E ++   I  +SP + + +S E+     A  LF  K       +    P
Sbjct: 602 RPLTPEEIADVEAEVNARIRENSPVVTRPMSQEEAVAQGAMALFGEKYGDEVRVVFMGAP 661

Query: 167 AKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAG 205
             +     R     +LC G HV  TG +   F++   AG
Sbjct: 662 EDD-----RPAWSIELCGGTHVNRTGDI-GLFRITSEAG 694


>gi|152979781|ref|YP_001352273.1| alanyl-tRNA synthetase [Janthinobacterium sp. Marseille]
 gi|205830071|sp|A6SVH6|SYA_JANMA RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|151279858|gb|ABR88268.1| alanyl-tRNA synthetase [Janthinobacterium sp. Marseille]
          Length = 869

 Score = 41.6 bits (96), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 67/144 (46%), Gaps = 19/144 (13%)

Query: 68  RSLAVIR-HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKK 125
           R  A +R HS  HIM +A++ +  +     G +++ D   +DF    P + +++ +IEK+
Sbjct: 551 RRAATMRNHSVTHIMHKALREVLGDHVQQKGSLVDPDKTRFDFAHNAPVTREQILEIEKR 610

Query: 126 MQEIIARDSPFLKQYLSHEKARE----LFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +   I  +S    + +  E A++    +   +K    V +L+   ++E            
Sbjct: 611 VNAEILLNSDTQARVMDIESAQKTGALMLFGEKYGETVRVLDIGSSRE------------ 658

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAG 205
           LC G HV  TG +   FK+M  +G
Sbjct: 659 LCGGTHVSRTGDI-GLFKVMSESG 681


>gi|255994094|ref|ZP_05427229.1| alanine--tRNA ligase [Eubacterium saphenum ATCC 49989]
 gi|255993762|gb|EEU03851.1| alanine--tRNA ligase [Eubacterium saphenum ATCC 49989]
          Length = 878

 Score = 41.6 bits (96), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 64/137 (46%), Gaps = 20/137 (14%)

Query: 68  RSLAVIRHSCAHIMAEAVQS-IWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKM 126
           R+ A+  H+  H+M  A++  I  ++  A   +  DG  +D + ++P S +EL  IE  +
Sbjct: 564 RNAAMANHTATHLMHAALRELISKDITQAGSKVSCDGLRFDINYKKPLSYEELRDIEVWV 623

Query: 127 QEIIARDSPFLKQYLSHEKARE-----LFESK-KEAYKVEILESIPAKENVTLYRQGEWF 180
            + IA   P  K+ +  ++A +     LF  K K+  +V  +E   +             
Sbjct: 624 NDRIASWLPVTKRIMKKDEAIKSGAIGLFSDKYKDDVRVVSIEDASS------------- 670

Query: 181 DLCRGPHVRSTGQVKKF 197
           +LC G HV +TG +  F
Sbjct: 671 ELCGGLHVDNTGYIGSF 687


>gi|325262048|ref|ZP_08128786.1| GTP diphosphokinase [Clostridium sp. D5]
 gi|324033502|gb|EGB94779.1| GTP diphosphokinase [Clostridium sp. D5]
          Length = 767

 Score = 41.6 bits (96), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 1/66 (1%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEII 62
           D+    P+G +KN P  +T  D A +I  ++  K V   +NGK+ ++   ++ G  IEI+
Sbjct: 423 DVYCFTPNGDVKNLPNGSTPVDFAYAIHSAVGNKMVGARVNGKLVNIDYKIQNGDRIEIL 482

Query: 63  TPEDPR 68
           T ++ +
Sbjct: 483 TSQNSK 488


>gi|312143669|ref|YP_003995115.1| prolyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
 gi|311904320|gb|ADQ14761.1| prolyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
          Length = 568

 Score = 41.6 bits (96), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 28/131 (21%), Positives = 60/131 (45%), Gaps = 7/131 (5%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           +G+  +   G+++ + + +  R+ +     +E+  P +    +W+ S  WD +   M  +
Sbjct: 37  AGIYSYLPLGYRVIKKIENITRKHMDASGAQEVLLPILQTAQIWKDSKRWDKFGPLMMRL 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           +   D     R + L P +      +    ++SY++LP+ L +  +  R+E      G+M
Sbjct: 97  RDRKD-----REYCLGPTHEEVVTDLIKDEIRSYKDLPLNLYQIQTKVRDEIRPRF-GVM 150

Query: 382 RVRGFTQDDAH 392
           R R F   DA+
Sbjct: 151 RGREFIMKDAY 161


>gi|210616270|ref|ZP_03291020.1| hypothetical protein CLONEX_03241 [Clostridium nexile DSM 1787]
 gi|210149868|gb|EEA80877.1| hypothetical protein CLONEX_03241 [Clostridium nexile DSM 1787]
          Length = 781

 Score = 41.6 bits (96), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 20/67 (29%), Positives = 37/67 (55%), Gaps = 1/67 (1%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEII 62
           D+    P+G +KN P  +T  D A +I  ++  K V   +NGK+ ++   ++ G  IEI+
Sbjct: 437 DVYCFTPNGDVKNLPNGSTPVDFAYAIHSAVGNKMVGARVNGKLVNIDYKIQNGDRIEIL 496

Query: 63  TPEDPRS 69
           T ++ + 
Sbjct: 497 TSQNSKG 503


>gi|319957309|ref|YP_004168572.1| alanyl-tRNA synthetase [Nitratifractor salsuginis DSM 16511]
 gi|319419713|gb|ADV46823.1| alanyl-tRNA synthetase [Nitratifractor salsuginis DSM 16511]
          Length = 859

 Score = 41.6 bits (96), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 38/143 (26%), Positives = 65/143 (45%), Gaps = 11/143 (7%)

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSDELAQIE 123
           +D R      HS  H++  A++ +  E     G ++E     +DF   +  S++EL ++E
Sbjct: 547 DDSRRQIAKHHSATHLLHAALREVLGEHVTQAGSLVEATRLRFDFTHPKALSAEELQKVE 606

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDL 182
             + E++ R      + L  E      E+KKE       E     + V + R G+   +L
Sbjct: 607 HWVNEVVDRAIEGEVKVLPIE------EAKKEGAMALFGEKY--GDEVRVVRFGDASVEL 658

Query: 183 CRGPHVRSTGQVKKFFKLMKVAG 205
           C G HVR+T +V   F + K +G
Sbjct: 659 CGGTHVRNTAEV-GLFAITKESG 680


>gi|237720697|ref|ZP_04551178.1| prolyl-tRNA synthetase [Bacteroides sp. 2_2_4]
 gi|293373969|ref|ZP_06620310.1| proline--tRNA ligase [Bacteroides ovatus SD CMC 3f]
 gi|229449532|gb|EEO55323.1| prolyl-tRNA synthetase [Bacteroides sp. 2_2_4]
 gi|292631045|gb|EFF49682.1| proline--tRNA ligase [Bacteroides ovatus SD CMC 3f]
          Length = 497

 Score = 41.6 bits (96), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 63/300 (21%), Positives = 128/300 (42%), Gaps = 56/300 (18%)

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECL 405
            + + ++SYR+LP+   ++ +V+R E    L   +R   F   + H    T+E+   E +
Sbjct: 134 TYKNWIQSYRDLPILCNQWANVFRWEMRTRL--FLRTAEFLWQEGHTAHATREEAEEEAI 191

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
           ++ N    +Y +F  EK M                   A  ++KGV      S+ +R   
Sbjct: 192 RMLN----VYGEFA-EKYM-------------------AVPVVKGV-----KSANERF-- 220

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIH 524
                 GA      E +++D  G+  Q GT   +  N    F+  +VN  ++  +   + 
Sbjct: 221 -----AGALDTYTIEAMMQD--GKALQSGTSHFLGQNFAKAFDVQFVNKENKLEY---VW 270

Query: 525 RAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTITSSAVEYAQEIANL------ 574
              +G   R +G +I     +    LP  L+PIQ ++  I  +  +  Q  A +      
Sbjct: 271 ATSWGVSTRLMGALIMTHSDDNGLVLPPHLAPIQVVIVPIYKNDEQLKQIDAKVEGIVAK 330

Query: 575 LKSHHLSIETD-FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
           LK+  +S++ D   N+   +K  ++ +K +P+ ++ G ++    ++ + R  +   + V+
Sbjct: 331 LKALGISVKYDNADNKRPGFKFADYELKGVPVRLVMGGRDLENNTMEVMRRDTLEKETVT 390


>gi|160882791|ref|ZP_02063794.1| hypothetical protein BACOVA_00752 [Bacteroides ovatus ATCC 8483]
 gi|156111815|gb|EDO13560.1| hypothetical protein BACOVA_00752 [Bacteroides ovatus ATCC 8483]
          Length = 497

 Score = 41.6 bits (96), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 63/300 (21%), Positives = 128/300 (42%), Gaps = 56/300 (18%)

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECL 405
            + + ++SYR+LP+   ++ +V+R E    L   +R   F   + H    T+E+   E +
Sbjct: 134 TYKNWIQSYRDLPILCNQWANVFRWEMRTRL--FLRTAEFLWQEGHTAHATREEAEEEAI 191

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
           ++ N    +Y +F  EK M                   A  ++KGV      S+ +R   
Sbjct: 192 RMLN----VYGEFA-EKYM-------------------AVPVVKGV-----KSANERF-- 220

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIH 524
                 GA      E +++D  G+  Q GT   +  N    F+  +VN  ++  +   + 
Sbjct: 221 -----AGALDTYTIEAMMQD--GKALQSGTSHFLGQNFAKAFDVQFVNKENKLEY---VW 270

Query: 525 RAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTITSSAVEYAQEIANL------ 574
              +G   R +G +I     +    LP  L+PIQ ++  I  +  +  Q  A +      
Sbjct: 271 ATSWGVSTRLMGALIMTHSDDNGLVLPPHLAPIQVVIVPIYKNDEQLKQIDAKVEGIVAK 330

Query: 575 LKSHHLSIETD-FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
           LK+  +S++ D   N+   +K  ++ +K +P+ ++ G ++    ++ + R  +   + V+
Sbjct: 331 LKALGISVKYDNADNKRPGFKFADYELKGVPVRLVMGGRDLENNTMEVMRRDTLEKETVT 390


>gi|319947807|ref|ZP_08022001.1| GTP diphosphokinase [Dietzia cinnamea P4]
 gi|319438531|gb|EFV93457.1| GTP diphosphokinase [Dietzia cinnamea P4]
          Length = 788

 Score = 41.6 bits (96), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 1/61 (1%)

Query: 10  PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPEDPR 68
           P G + N PV AT  D A ++   +  + +   +NGK+  L  P+  G  +E+ T +DP 
Sbjct: 454 PKGDVINLPVGATPVDFAYAVHTEVGHRCIGARVNGKLVALERPLENGEVVEVFTSKDPN 513

Query: 69  S 69
           +
Sbjct: 514 A 514


>gi|306823404|ref|ZP_07456779.1| proline--tRNA ligase [Bifidobacterium dentium ATCC 27679]
 gi|309802595|ref|ZP_07696699.1| proline--tRNA ligase [Bifidobacterium dentium JCVIHMP022]
 gi|304553111|gb|EFM41023.1| proline--tRNA ligase [Bifidobacterium dentium ATCC 27679]
 gi|308220659|gb|EFO76967.1| proline--tRNA ligase [Bifidobacterium dentium JCVIHMP022]
          Length = 611

 Score = 41.6 bits (96), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 32/139 (23%), Positives = 63/139 (45%), Gaps = 11/139 (7%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK 322
           G+  W   G  +   + + +R ++   D +E++   +L +  ++ +  W+ Y  N+F +K
Sbjct: 42  GIWTWLPLGLTVLNKIENIIREEMASIDAQEVHFSGLLPREPYEATHRWEEYGDNIFRLK 101

Query: 323 CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE--PSGSLHGL 380
              +       + L P +      +      SY++LPV L +  + YR+E  P     GL
Sbjct: 102 DRHEA-----DYLLAPTHEEMFTLLVKDLYSSYKDLPVTLYQIQTKYRDEFRPRA---GL 153

Query: 381 MRVRGFTQDDAHVFCTKEQ 399
           +R R F   DA+ F   ++
Sbjct: 154 IRGREFIMKDAYSFTLDKE 172


>gi|328869252|gb|EGG17630.1| prolyl-tRNA synthetase [Dictyostelium fasciculatum]
          Length = 642

 Score = 41.6 bits (96), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 32/137 (23%), Positives = 64/137 (46%), Gaps = 10/137 (7%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           +++  P ++ + LW+++G W++  A +  VK   +       + L P +     ++  + 
Sbjct: 142 QKLTMPLLVSKDLWEKTGRWETTGAELIKVKDRKE-----EEYCLAPTHEEIFTSLVANE 196

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI 411
             S    P+RL + G+ YR+E      GL+R R F   D + F   +Q   E +  +N I
Sbjct: 197 RLSNSNFPLRLYQIGNKYRDEIRPRF-GLVRGREFLMKDLYSF---DQTRVEAVATYNDI 252

Query: 412 ISIYKDFGFEKIMVKLS 428
              Y    F+++ +K +
Sbjct: 253 KGAYHRV-FDRVGLKYA 268


>gi|302871868|ref|YP_003840504.1| alanyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
 gi|302574727|gb|ADL42518.1| alanyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
          Length = 881

 Score = 41.6 bits (96), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 46/196 (23%), Positives = 85/196 (43%), Gaps = 32/196 (16%)

Query: 54  VREGSIEIITP------EDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYY 106
           V +G I +++       E  R   +  H+  H++  A++ I  +  Q +   +  D   +
Sbjct: 537 VLKGEISVLSSVIAKVDEGLRFATMKNHTATHLLHSALRKILGQHAQQSGSQVSADRLRF 596

Query: 107 DFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEK-----ARELFESKKEAYKVEI 161
           DF   +P S +++ +IEK +  +I +  P  K     +      A  LF+ K        
Sbjct: 597 DFAHYEPLSEEQIIEIEKMVNNVIQQAIPVEKIVTDLDSALRMGATALFDEKYSNV---- 652

Query: 162 LESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKFFKLM---KVAGAYWRGDSNRPML 217
                    V + + G++  +LC G HV +TGQ+   FK++    VA    R ++     
Sbjct: 653 ---------VRVIKIGDFSMELCGGTHVDNTGQI-GMFKIISESSVAAGVRRIEAITG-- 700

Query: 218 SRIYGTAWNTQQELTQ 233
           +++Y    N+QQ L Q
Sbjct: 701 NKVYEFILNSQQTLKQ 716


>gi|300858703|ref|YP_003783686.1| prolyl-tRNA synthetase [Corynebacterium pseudotuberculosis FRC41]
 gi|300686157|gb|ADK29079.1| Prolyl-tRNA synthetase [Corynebacterium pseudotuberculosis FRC41]
          Length = 585

 Score = 41.6 bits (96), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 39/174 (22%), Positives = 73/174 (41%), Gaps = 18/174 (10%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R     +I     GV  W   G +  + + + +R ++     +E+  P 
Sbjct: 19  DAEVPSHKLLVRAR---YIRRAAPGVYTWLPLGLRTLKKIENIVREEMDGIGAQELLFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L +  +Q +  W  Y  ++F +K  D    D        +  P H  +F   +K    S
Sbjct: 76  LLPREPYQATNRWTEYGDSLFRLK--DRKGADY-------LLGPTHEEMFAGAVKDMYSS 126

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
           Y++ PV L +  + YR+E      G++R R F   D++ F   +       + H
Sbjct: 127 YKDFPVTLYQIQTKYRDEER-PRAGILRGREFVMKDSYSFDMTDDGLESSYQRH 179


>gi|108799043|ref|YP_639240.1| prolyl-tRNA synthetase [Mycobacterium sp. MCS]
 gi|119868158|ref|YP_938110.1| prolyl-tRNA synthetase [Mycobacterium sp. KMS]
 gi|126434646|ref|YP_001070337.1| prolyl-tRNA synthetase [Mycobacterium sp. JLS]
 gi|122977105|sp|Q1BAA0|SYP_MYCSS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|152112933|sp|A1UER2|SYP_MYCSK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|108769462|gb|ABG08184.1| prolyl-tRNA synthetase [Mycobacterium sp. MCS]
 gi|119694247|gb|ABL91320.1| prolyl-tRNA synthetase [Mycobacterium sp. KMS]
 gi|126234446|gb|ABN97846.1| prolyl-tRNA synthetase [Mycobacterium sp. JLS]
          Length = 584

 Score = 41.6 bits (96), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 34/152 (22%), Positives = 66/152 (43%), Gaps = 15/152 (9%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           G G+  W   G ++F+ +   +R ++     +EI  P +L +  ++ +  W  Y   +F 
Sbjct: 38  GPGLYTWLPLGLRVFRKIEQIVRDEMTAIGGQEILFPALLPRAPYETTNRWTEYGDTLFR 97

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----SYRELPVRLAEFGSVYRNEPSGS 376
           +K   D       + L P     H  +F   +K    SY++ P+ L +  + YR+E +  
Sbjct: 98  LKDRRDN-----DYLLGPT----HEELFTLTVKGEYSSYKDFPLILFQIQTKYRDE-ARP 147

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
             G++R R F   D++ F   +        +H
Sbjct: 148 RAGILRGREFVMKDSYSFDVDDDGLKTAYHLH 179


>gi|331090838|ref|ZP_08339684.1| hypothetical protein HMPREF9477_00327 [Lachnospiraceae bacterium
           2_1_46FAA]
 gi|330399697|gb|EGG79359.1| hypothetical protein HMPREF9477_00327 [Lachnospiraceae bacterium
           2_1_46FAA]
          Length = 555

 Score = 41.6 bits (96), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 43/188 (22%), Positives = 76/188 (40%), Gaps = 5/188 (2%)

Query: 14  IKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAV 72
           IK +    T   +AE          V V ++GK+ +L    + +  +E IT +       
Sbjct: 14  IKLYEEGTTYKKIAEDYQGEYENDIVLVLVDGKLQELPKQCKHDCKLEFITTDTKIGNET 73

Query: 73  IRHSCAHIMAEAVQSIWPEVQVA---IGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
            R S   +M +A++ +  +  V    +   +  G+Y   D +   +   L Q+EK+M+E+
Sbjct: 74  YRRSMCLLMVKAIEDVTGKENVKKIRVQYSVSKGYYCTADGDFEITDTFLRQVEKRMEEM 133

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
               +P +K+ +  + A  LF+ +   Y  E L        V LY      D   G  V 
Sbjct: 134 AEEKTPIVKKTVHIDDAMSLFKEQG-MYDKERLFRYRRVSAVNLYEMENMADYYYGYMVP 192

Query: 190 STGQVKKF 197
               +K F
Sbjct: 193 DASYLKYF 200


>gi|66768815|ref|YP_243577.1| alanyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           8004]
 gi|81305217|sp|Q4UTR6|SYA_XANC8 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|66574147|gb|AAY49557.1| alanyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           8004]
          Length = 882

 Score = 41.6 bits (96), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 33/140 (23%), Positives = 61/140 (43%), Gaps = 11/140 (7%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKM 126
           R   ++ HS  H++  A++ +    VQ     +  D   +DF   QP +++ELA IE+K+
Sbjct: 563 RGKTILNHSATHLLHAALREVLGTHVQQKGSLVAPDRLRFDFSHFQPITAEELAVIERKV 622

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRG 185
              +  +       ++ ++A +        +    L      E V + + G +  +LC G
Sbjct: 623 NAEVRTNHSVEVHNMAMQEALD--------FGAMALFGEKYGERVRVLKMGGYSTELCGG 674

Query: 186 PHVRSTGQVKKFFKLMKVAG 205
            HV  TG +   FK+    G
Sbjct: 675 THVSRTGDI-GLFKITSEGG 693


>gi|167855383|ref|ZP_02478150.1| SpoT [Haemophilus parasuis 29755]
 gi|167853531|gb|EDS24778.1| SpoT [Haemophilus parasuis 29755]
          Length = 703

 Score = 41.6 bits (96), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 1/67 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           SDI +  P G I   P +AT  D A ++   +  + +   ++ +   LS P++ G +IEI
Sbjct: 384 SDIYVFTPKGRIVQLPANATAVDFAYAVHTDVGDRCIGAVVDHQPYPLSQPLQSGQTIEI 443

Query: 62  ITPEDPR 68
            T E PR
Sbjct: 444 QTAESPR 450


>gi|317030877|ref|XP_001392403.2| prolyl-tRNA synthetase [Aspergillus niger CBS 513.88]
          Length = 576

 Score = 41.6 bits (96), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 7/93 (7%)

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           Q LW+QSG      + +F  +   ++      F L P +      +  H  KSYR+LPVR
Sbjct: 99  QELWEQSGRLKE-GSEIFRFQDRKES-----RFLLAPTHEEEITTLVGHLTKSYRDLPVR 152

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           + +    YR+E      GL+R R F   D + F
Sbjct: 153 VYQISRKYRDEQR-PRQGLLRGREFIMKDLYTF 184


>gi|219871225|ref|YP_002475600.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
           [Haemophilus parasuis SH0165]
 gi|219691429|gb|ACL32652.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
           [Haemophilus parasuis SH0165]
          Length = 652

 Score = 41.6 bits (96), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 1/67 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           SDI +  P G I   P +AT  D A ++   +  + +   ++ +   LS P++ G +IEI
Sbjct: 333 SDIYVFTPKGRIVQLPANATAVDFAYAVHTDVGDRCIGAVVDHQPYPLSQPLQSGQTIEI 392

Query: 62  ITPEDPR 68
            T E PR
Sbjct: 393 QTAESPR 399


>gi|260437936|ref|ZP_05791752.1| GTP diphosphokinase [Butyrivibrio crossotus DSM 2876]
 gi|292809687|gb|EFF68892.1| GTP diphosphokinase [Butyrivibrio crossotus DSM 2876]
          Length = 762

 Score = 41.6 bits (96), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 1/60 (1%)

Query: 10  PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPEDPR 68
           P G +KN P  +T  D A SI  ++  K V   +NGK+  +   ++ G  IE+IT ++ +
Sbjct: 423 PQGDVKNLPAGSTPIDFAYSIHSAVGNKMVGAKVNGKLVPIDYKIKNGDRIEVITSQNSK 482


>gi|329766758|ref|ZP_08258301.1| glycyl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
 gi|329137013|gb|EGG41306.1| glycyl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
          Length = 485

 Score = 41.6 bits (96), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 4/85 (4%)

Query: 336 LKPMNCPGHVAVFNHGLKSYR-ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           L+P  C      F    K+ R +LP+ +A+ G  +RNE S     L+R+R F Q +  VF
Sbjct: 159 LRPETCQSIFVDFPRLYKTMRGKLPLGIAQVGKSFRNEISPR-QSLLRLREFYQAEIEVF 217

Query: 395 CTKEQM--FNECLKIHNLIISIYKD 417
           C   ++    +  +I N II I  D
Sbjct: 218 CNPNKLDEIEKFREIENAIIRIQTD 242


>gi|251798323|ref|YP_003013054.1| alanyl-tRNA synthetase [Paenibacillus sp. JDR-2]
 gi|247545949|gb|ACT02968.1| alanyl-tRNA synthetase [Paenibacillus sp. JDR-2]
          Length = 877

 Score = 41.6 bits (96), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 76/158 (48%), Gaps = 12/158 (7%)

Query: 51  SDPVREG-SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDF 108
           S  VR G ++E +     R   +  H+  H++ +A++ +  +     G +++ D   +DF
Sbjct: 537 SGTVRTGETVEAVVIRSVREDVIKNHTATHLLHKALKEVLGDHVNQAGSLVQADRLRFDF 596

Query: 109 DKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK 168
                 + +EL +IE+K+ E I   +P + +      ++++ E+K  A     L      
Sbjct: 597 SHFGSITPEELTEIERKVNEQIWIGTPVVIE------SKQIAEAK--AMGAMALFGEKYG 648

Query: 169 ENVTLYRQGEW-FDLCRGPHVRSTGQVKKFFKLMKVAG 205
           + V + + G +  +LC G HV +T Q+   FKL+  +G
Sbjct: 649 DIVRVVQVGNYSIELCGGCHVANTSQI-GMFKLVSESG 685


>gi|163856313|ref|YP_001630611.1| alanyl-tRNA synthetase [Bordetella petrii DSM 12804]
 gi|205829993|sp|A9IK31|SYA_BORPD RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|163260041|emb|CAP42342.1| alaS2 [Bordetella petrii]
          Length = 873

 Score = 41.6 bits (96), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 20/144 (13%)

Query: 68  RSLAVIRHSCAHIMAEAV-QSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKM 126
           R+  V  HS  H+M +A+ Q +   VQ     +  D   +DF  + P S++++AQ+E  +
Sbjct: 555 RARTVRNHSATHLMHKALRQVLGAHVQQRGSLVDPDKTRFDFAHDAPLSAEQIAQVEAIV 614

Query: 127 QEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
              +  + P   + ++++ A +     LF  +K    V +L+   ++E            
Sbjct: 615 NAEVLANQPTQARVMAYDDAVKGGAMALF-GEKYGDTVRVLDIGFSRE------------ 661

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAG 205
           LC G HV  TG +   FK++   G
Sbjct: 662 LCGGTHVSRTGDI-GLFKIVAEGG 684


>gi|145295898|ref|YP_001138719.1| prolyl-tRNA synthetase [Corynebacterium glutamicum R]
 gi|166980117|sp|A4QF01|SYP_CORGB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|140845818|dbj|BAF54817.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 588

 Score = 41.6 bits (96), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 40/192 (20%), Positives = 81/192 (42%), Gaps = 11/192 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +  +A    G+  W   G +  + + + +R ++     +E+  P 
Sbjct: 19  DAEVPSHKLLVRAGYIRRVA---PGIYSWLPLGLRAVRNIEAVVREEMDAIGGQELLFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++ +  W  Y  ++F +K  D    D   + L P +     A       SY++ 
Sbjct: 76  LLPREPYETTQRWTEYGDSLFRLK--DRKGAD---YLLGPTHEEMFAATVKDLYNSYKDF 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS-IYKD 417
           PV L +  + YR+E      G++R R F   D++ F   +   +E    H      I+  
Sbjct: 131 PVTLYQIQTKYRDEER-PRAGVLRGREFVMKDSYSFDMSDAGLDESYAKHRAAYQRIFDR 189

Query: 418 FGFEKIMVKLST 429
            G E  + + ++
Sbjct: 190 LGLEYAICQATS 201


>gi|27820035|gb|AAO25049.1| GM03563p [Drosophila melanogaster]
          Length = 458

 Score = 41.6 bits (96), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 30/119 (25%), Positives = 54/119 (45%), Gaps = 7/119 (5%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF-NH 350
           ++I  P +    LW+++G  D   +  + V+      +  + F + P +     A+    
Sbjct: 74  QKITLPILTPTGLWKKTGRLDGDISEFYMVR-----DRSGKQFLMSPTHEEAVTAMLATT 128

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
              SYR+LP+RL + G  +R+E   +  GLMR + F   D + F   E+   E   + N
Sbjct: 129 SPISYRQLPLRLFQIGPKFRDELK-TRFGLMRAKEFLMKDMYSFDVSEETAMETYTVVN 186


>gi|21231177|ref|NP_637094.1| alanyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
 gi|24418692|sp|Q8P9X0|SYA_XANCP RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|21112818|gb|AAM41018.1| alanyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
          Length = 882

 Score = 41.6 bits (96), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 31/132 (23%), Positives = 58/132 (43%), Gaps = 10/132 (7%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKM 126
           R   ++ HS  H++  A++ +    VQ     +  D   +DF   QP +++ELA IE+K+
Sbjct: 563 RGKTILNHSATHLLHAALREVLGTHVQQKGSLVAPDRLRFDFSHFQPITAEELAVIERKV 622

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRG 185
              +  +       ++ ++A +        +    L      E V + + G +  +LC G
Sbjct: 623 NAEVRTNHSVEVHNMAMQEALD--------FGAMALFGEKYGERVRVLKMGGYSTELCGG 674

Query: 186 PHVRSTGQVKKF 197
            HV  TG +  F
Sbjct: 675 THVSRTGDIGLF 686


>gi|66047550|ref|YP_237391.1| synthetase, putative [Pseudomonas syringae pv. syringae B728a]
 gi|63258257|gb|AAY39353.1| synthetase, putative [Pseudomonas syringae pv. syringae B728a]
 gi|330969480|gb|EGH69546.1| synthetase, putative [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 263

 Score = 41.6 bits (96), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 51/94 (54%), Gaps = 4/94 (4%)

Query: 50  LSDPVREGSIEIITPEDPRSLAV-IRHSCAHIMAEAVQSIWPEV-QVAIG-PIIEDGFYY 106
           L D + EG   +I  +  R   + + HS +H +  A  S+  E+ Q  IG  I E+   +
Sbjct: 103 LLDSISEGMAALIRIDILRRERLSLSHSASHFLYAAATSLSEELKQWTIGCHIKENSARF 162

Query: 107 DFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQY 140
           DF  E+ FSSD++++IE+   E+IA D   +K Y
Sbjct: 163 DFLVEESFSSDDISEIERLANELIAHDD-VIKSY 195


>gi|195501338|ref|XP_002097755.1| GE24299 [Drosophila yakuba]
 gi|194183856|gb|EDW97467.1| GE24299 [Drosophila yakuba]
          Length = 417

 Score = 41.6 bits (96), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 52/233 (22%), Positives = 102/233 (43%), Gaps = 23/233 (9%)

Query: 229 QELTQYLY--FLEESEKRDHRKLAREMDLFHIAEDG--SGVIFWHRKGW--KIFQTLISY 282
           +EL QY++     +S  ++  +LAR ++L+ +   G  +G   ++  G    + Q +I Y
Sbjct: 101 RELAQYVHRQLPPQSTLKEFSELARALNLYRMDHLGNYTGHKSYYLTGQLATLEQAIIQY 160

Query: 283 MRRKIKD-DYEEINTPQVLDQHLWQQSG-HWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
             + + D  ++ I+ P +L + + +  G   +  R  ++ +   +  +      AL    
Sbjct: 161 ALQAVTDHGFKLISVPDILPKEVIESCGMRTEGERTQVYKLDTGE-CLSGTSEMAL---- 215

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG--SLHGLMRVRGFTQDDAHVFCTKE 398
                  F++ L S  +LP+++      YR E SG     G+ RV  F + +    CT+E
Sbjct: 216 ----AGFFSNKLLSEEQLPMKVTAVSRCYRAETSGLQEEKGIYRVHQFNKVEMFAICTEE 271

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWD-DAENIMKG 450
           Q   E  +  N+ + +++  G      +L   P   +G+ A    D E  M G
Sbjct: 272 QSEAELEEFKNIEVDLFRRLGLN---FRLLDMPPCELGAPAYQKYDIEAWMPG 321


>gi|163741065|ref|ZP_02148457.1| alanyl-tRNA synthetase [Phaeobacter gallaeciensis 2.10]
 gi|161385418|gb|EDQ09795.1| alanyl-tRNA synthetase [Phaeobacter gallaeciensis 2.10]
          Length = 883

 Score = 41.6 bits (96), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 43/176 (24%), Positives = 77/176 (43%), Gaps = 9/176 (5%)

Query: 36  KKAVAVAIN-GKVCDLSDPVREGSIEIITPEDPRSLAV-IRHSCAHIMAEAVQSIWPEVQ 93
           KKA  V I+ GKV   S  + +G+   +  +  R  A+   HS  H++ EA++    +  
Sbjct: 523 KKAAGVFIHFGKVE--SGMITKGAAAQLEVDHLRRSAIRANHSATHLLHEALREALGDHV 580

Query: 94  VAIGPI-IEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFES 152
              G +  +D   +DF   +  S++EL ++   +   I +++    + ++ + AR L   
Sbjct: 581 AQRGSLNADDRLRFDFSHNKALSAEELRRVAVDVNRFIRQNTVVETRIMTPDDARALGAQ 640

Query: 153 K--KEAYKVEILESIPAKENVTLYRQGEWF--DLCRGPHVRSTGQVKKFFKLMKVA 204
               E Y  E+      +      + G  +  +LC G HVR TG +  F  L   A
Sbjct: 641 ALFGEKYGDEVRVVSMGEAATGKGQDGNTYSIELCGGTHVRQTGDIGTFVILSDSA 696


>gi|77164443|ref|YP_342968.1| alanine--tRNA ligase [Nitrosococcus oceani ATCC 19707]
 gi|254433958|ref|ZP_05047466.1| alanyl-tRNA synthetase [Nitrosococcus oceani AFC27]
 gi|123594696|sp|Q3JCK8|SYA_NITOC RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|76882757|gb|ABA57438.1| alanyl-tRNA synthetase [Nitrosococcus oceani ATCC 19707]
 gi|207090291|gb|EDZ67562.1| alanyl-tRNA synthetase [Nitrosococcus oceani AFC27]
          Length = 873

 Score = 41.6 bits (96), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 35/140 (25%), Positives = 61/140 (43%), Gaps = 11/140 (7%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFSSDELAQIEKKM 126
           R+   + HS  H++  A++ +  E  +  G ++  D   +DF   +   S +L QIE  +
Sbjct: 550 RTPTRLNHSATHLLHAALREVLGEGVIQKGSLVASDRLRFDFSHLEAVQSGQLRQIEHLV 609

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRG 185
              I  + P   Q +  ++A +          V  L      E V + R G++  +LC G
Sbjct: 610 NAKIRANLPVETQIMPLQQALD--------AGVMALFGEKYGEQVRVLRMGDFSMELCGG 661

Query: 186 PHVRSTGQVKKFFKLMKVAG 205
            HV  TG +   FK++   G
Sbjct: 662 THVDRTGDI-GLFKIINEMG 680


>gi|19553198|ref|NP_601200.1| prolyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|62390834|ref|YP_226236.1| prolyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|81847611|sp|Q8NP31|SYP_CORGL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|21324764|dbj|BAB99387.1| Prolyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|41326172|emb|CAF20335.1| PROBABLE PROLYL-TRNA SYNTHETASE PROTEIN [Corynebacterium glutamicum
           ATCC 13032]
          Length = 588

 Score = 41.6 bits (96), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 40/192 (20%), Positives = 81/192 (42%), Gaps = 11/192 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +  +A    G+  W   G +  + + + +R ++     +E+  P 
Sbjct: 19  DAEVPSHKLLVRAGYIRRVA---PGIYSWLPLGLRAVRNIEAVVREEMDAIGGQELLFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++ +  W  Y  ++F +K  D    D   + L P +     A       SY++ 
Sbjct: 76  LLPREPYETTQRWTEYGDSLFRLK--DRKGAD---YLLGPTHEEMFAATVKDLYNSYKDF 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS-IYKD 417
           PV L +  + YR+E      G++R R F   D++ F   +   +E    H      I+  
Sbjct: 131 PVTLYQIQTKYRDEER-PRAGVLRGREFVMKDSYSFDISDAGLDESYAKHRAAYQRIFDR 189

Query: 418 FGFEKIMVKLST 429
            G E  + + ++
Sbjct: 190 LGLEYAICQATS 201


>gi|225620397|ref|YP_002721654.1| alanyl-tRNA synthetase [Brachyspira hyodysenteriae WA1]
 gi|225215216|gb|ACN83950.1| alanyl-tRNA synthetase [Brachyspira hyodysenteriae WA1]
          Length = 867

 Score = 41.6 bits (96), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 32/140 (22%), Positives = 56/140 (40%), Gaps = 7/140 (5%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY-YDFDKEQPFSSD 117
           I++    D RS     H+  HI+ + ++          G  + D +  +DF      S D
Sbjct: 542 IKLFVNFDRRSAIRKNHTATHILQKVLELTLGNHVNQAGSFVSDEYLRFDFTHPDSISED 601

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
            L  IE ++ E++ +  P + +Y+  E+A           K    E  P    +     G
Sbjct: 602 TLISIENQVNEVVFKSMPAVIKYMPKEEAIAC------GAKALFGEKYPDTVRILDIGNG 655

Query: 178 EWFDLCRGPHVRSTGQVKKF 197
              +LC G H+ +T +V  F
Sbjct: 656 FSVELCGGSHLTNTSEVGYF 675


>gi|167758796|ref|ZP_02430923.1| hypothetical protein CLOSCI_01138 [Clostridium scindens ATCC 35704]
 gi|167663536|gb|EDS07666.1| hypothetical protein CLOSCI_01138 [Clostridium scindens ATCC 35704]
          Length = 781

 Score = 41.6 bits (96), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 1/66 (1%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEII 62
           D+    P G +KN P  +T  D A +I  ++  K V   +NGK+ ++   ++ G  IEI+
Sbjct: 437 DVYCFTPQGDVKNLPNGSTPIDFAYAIHSAVGNKMVGARVNGKLVNIEYKIQNGDRIEIL 496

Query: 63  TPEDPR 68
           T ++ R
Sbjct: 497 TSQNSR 502


>gi|194226155|ref|XP_001496737.2| PREDICTED: similar to mitochondrial ribosomal protein L39 [Equus
           caballus]
          Length = 433

 Score = 41.6 bits (96), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 47/190 (24%), Positives = 87/190 (45%), Gaps = 22/190 (11%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIR---HS 76
           +T    A  +S    +K++   ++G+  D+  P+ +   I+ +T +D     V +    S
Sbjct: 181 STPYSCAMHLSEWYCRKSILALVDGQPWDMYKPLTKSCEIQFLTFKDRDPGEVNKAYWRS 240

Query: 77  CAHIMAEAVQSIWPE------VQVAIGPIIEDGFYYD--FDK---EQPFSSDELAQIEKK 125
           CA +M   ++  + +      V+    P+I   F YD   DK   E   + + L    K 
Sbjct: 241 CAMMMGCVIERAFKDEYVVSLVRAPEVPVIAGAFCYDVVLDKRLDEWVPTKENLRSFTKD 300

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN----VTLYRQGEWFD 181
            + +I +D PF    +  + A E+F+  K  YK++ +E   A +N    V L+R G++ D
Sbjct: 301 ARALIYKDLPFEPLEVDAKVALEIFQHNK--YKIDFIEEK-ASQNPERIVKLHRFGDFVD 357

Query: 182 LCRGPHVRST 191
           +  GP +  T
Sbjct: 358 VSEGPLIPRT 367


>gi|188994239|ref|YP_001928491.1| phosphoribulose/uridine kinase [Porphyromonas gingivalis ATCC
           33277]
 gi|188593919|dbj|BAG32894.1| phosphoribulose/uridine kinase [Porphyromonas gingivalis ATCC
           33277]
          Length = 554

 Score = 41.6 bits (96), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 33/151 (21%), Positives = 64/151 (42%), Gaps = 1/151 (0%)

Query: 15  KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPEDPRSLAVI 73
           + FP   +   VAE     L  +     +N    DL   + E S +   +  D   +   
Sbjct: 15  EEFPHGISLERVAEYFQDDLGFRPFNAQVNHCTRDLGFRLYEPSDVLFASFSDESGMRTY 74

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
             + + I+++AV  I P  ++ I   + +G+Y         +  E+ +I+++M+ +I  D
Sbjct: 75  VRTLSFILSKAVADILPGSKLFIEHSLSNGYYCQIKNAHMITPGEIVRIKERMESLIVAD 134

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILES 164
            PF       E+   +F S     K ++LE+
Sbjct: 135 IPFRAHCERTEEVAAMFRSMGYEDKADLLET 165


>gi|227902950|ref|ZP_04020755.1| seryl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
 gi|227869299|gb|EEJ76720.1| seryl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
          Length = 441

 Score = 41.6 bits (96), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 32/151 (21%), Positives = 65/151 (43%), Gaps = 4/151 (2%)

Query: 282 YMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           ++    KD Y EI  P +++    Q +G +  +  +++ +   DD  K  R   L P   
Sbjct: 187 FLDENTKDGYTEIIPPYLVNDASMQGTGQFPKFHEDVYTIVDNDDPDKP-RDLTLIPTAE 245

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKE 398
              V  F + +    +LP+ +      +R+E   +     GL+R+  F + +    C  +
Sbjct: 246 VPLVNYFRNEIIHENKLPINVTAMSPAFRSEAGSAGRDTRGLIRMHEFRKVEMVKICKPD 305

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
           + ++E  K+ +    + +  G    +V LST
Sbjct: 306 ESWDELEKLTHNAEHLLQKLGLPYHVVALST 336


>gi|90020946|ref|YP_526773.1| alanyl-tRNA synthetase [Saccharophagus degradans 2-40]
 gi|123396361|sp|Q21L68|SYA_SACD2 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|89950546|gb|ABD80561.1| alanyl-tRNA synthetase [Saccharophagus degradans 2-40]
          Length = 875

 Score = 41.6 bits (96), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 38/157 (24%), Positives = 64/157 (40%), Gaps = 29/157 (18%)

Query: 46  KVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGF 104
           KV D + PV + ++        R    + HS  H++  A++ +  E     G +++ +  
Sbjct: 541 KVGDKAQPVVDSAV--------RQATALNHSATHLLHAALRKVLGEHVTQKGSLVDSERL 592

Query: 105 YYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKV 159
            +DF   +    +EL QIE  + E I  +SP   +    E A++     LF  K      
Sbjct: 593 RFDFSHFEAVKPEELKQIESMVNEQIRLNSPVETELCDMEAAQQKGAMALFGEKY----- 647

Query: 160 EILESIPAKENVTLYRQGEWF--DLCRGPHVRSTGQV 194
                    + V +   G  F  +LC G HV  TG +
Sbjct: 648 --------GDEVRVLSMGGAFSVELCGGTHVSRTGDI 676


>gi|295396919|ref|ZP_06807043.1| alanine--tRNA ligase [Aerococcus viridans ATCC 11563]
 gi|294974853|gb|EFG50556.1| alanine--tRNA ligase [Aerococcus viridans ATCC 11563]
          Length = 880

 Score = 41.6 bits (96), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 41/172 (23%), Positives = 72/172 (41%), Gaps = 23/172 (13%)

Query: 36  KKAVAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVA 95
           K A A+ ++  V  + D  R  SIE              H+  H++ +A++ +  +    
Sbjct: 542 KLAAAIVLDQTVQLVVDRRRHHSIEK------------NHTATHLLHQALKDVLGDHANQ 589

Query: 96  IGPII-EDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            G ++  D   +DF      + +ELA++E K+ E IA   P +    S ++AR       
Sbjct: 590 AGSLVTADHLRFDFSHFGQVTDEELAEMEAKVNEAIAEAFPVVTTVTSIDEAR------- 642

Query: 155 EAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKFFKLMKVAG 205
            A   + L        V +     W  +LC G HV +T ++   FK+   +G
Sbjct: 643 -AAGAQALFGEKYGSEVRMVDINHWSIELCGGTHVGNTAEI-GLFKITSESG 692


>gi|188991930|ref|YP_001903940.1| alanyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           B100]
 gi|205830286|sp|B0RTY1|SYA_XANCB RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|167733690|emb|CAP51895.1| unnamed protein product [Xanthomonas campestris pv. campestris]
          Length = 882

 Score = 41.6 bits (96), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 33/140 (23%), Positives = 61/140 (43%), Gaps = 11/140 (7%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKM 126
           R   ++ HS  H++  A++ +    VQ     +  D   +DF   QP +++ELA IE+K+
Sbjct: 563 RGKTILNHSATHLLHAALREVLGTHVQQKGSLVAPDRLRFDFSHFQPITAEELAVIERKV 622

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRG 185
              +  +       ++ ++A +        +    L      E V + + G +  +LC G
Sbjct: 623 NAEVRTNHSVEVHNMAMQEALD--------FGAMALFGEKYGERVRVLKMGGYSTELCGG 674

Query: 186 PHVRSTGQVKKFFKLMKVAG 205
            HV  TG +   FK+    G
Sbjct: 675 THVSRTGDI-GLFKITSEGG 693


>gi|308048574|ref|YP_003912140.1| alanyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
 gi|307630764|gb|ADN75066.1| alanyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
          Length = 876

 Score = 41.6 bits (96), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 42/171 (24%), Positives = 74/171 (43%), Gaps = 18/171 (10%)

Query: 40  AVAINGKVCDLSDPVREGSIEIITPEDPRSLAV-IRHSCAHIMAEAVQSIWPEVQVAIGP 98
           A+A  GK+  +S   + G       +  R  A+ + HS  H++  A++++  +     G 
Sbjct: 531 AIAHKGKL--VSGAFQRGDAVAAEVDASRRDAIRLNHSATHLLHAALRNLLGDHVTQKGS 588

Query: 99  II-EDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHE--KARELFESKKE 155
           ++  D   +DF   +  S DEL  IE ++ E I  +     + +  E  KAR       E
Sbjct: 589 LVMADRLRFDFSHFEGVSRDELVAIENQVNEQIRANHSIDTELMDIEAAKARGAMALFGE 648

Query: 156 AYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKFFKLMKVAG 205
            Y           + V +   G++  +LC G H + TG +  FFK++   G
Sbjct: 649 KY----------DDQVRVLAMGDYSIELCGGIHAKRTGDI-GFFKIVSEGG 688


>gi|226323920|ref|ZP_03799438.1| hypothetical protein COPCOM_01697 [Coprococcus comes ATCC 27758]
 gi|225207469|gb|EEG89823.1| hypothetical protein COPCOM_01697 [Coprococcus comes ATCC 27758]
          Length = 774

 Score = 41.6 bits (96), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 22/81 (27%), Positives = 44/81 (54%), Gaps = 6/81 (7%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEII 62
           D+    P+G +KN P  +T  D A +I  ++  K V   +NGK+ ++   ++ G  IEI+
Sbjct: 430 DVYCFTPNGDVKNLPNGSTPVDFAYAIHTAVGNKMVGARVNGKLVNIDYKIQNGDRIEIL 489

Query: 63  TPEDPRS-----LAVIRHSCA 78
           T ++ +      L++++ + A
Sbjct: 490 TSQNSKGPSRDWLSIVKSTQA 510


>gi|146296899|ref|YP_001180670.1| alanyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
 gi|205830010|sp|A4XKP4|SYA_CALS8 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|145410475|gb|ABP67479.1| alanyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
          Length = 881

 Score = 41.6 bits (96), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 34/131 (25%), Positives = 66/131 (50%), Gaps = 11/131 (8%)

Query: 70  LAVIR-HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQ 127
           LA ++ H+  H++  +++ I  E     G ++E +   +DF   +P S +++ +IEK + 
Sbjct: 558 LATMKNHTATHLLHSSLRRILGEHATQSGSLVEPERLRFDFAHFEPLSEEQIVEIEKMVN 617

Query: 128 EIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGP 186
           +II +  P  K     + A ++  +   A   E   +I     V + + G++  +LC G 
Sbjct: 618 DIIQQAIPVEKIQTDLDSAIKMGAT---ALFDEKYSNI-----VRVIKIGDFSMELCGGT 669

Query: 187 HVRSTGQVKKF 197
           HV +TGQ+  F
Sbjct: 670 HVDNTGQIGMF 680


>gi|75908168|ref|YP_322464.1| threonyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
 gi|75701893|gb|ABA21569.1| threonyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
          Length = 60

 Score = 41.6 bits (96), Expect = 0.47,   Method: Composition-based stats.
 Identities = 18/36 (50%), Positives = 24/36 (66%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY 105
           L  IRH+CAHIMA AVQ ++   +VA   + + GFY
Sbjct: 20  LVRIRHTCAHIMAMAVQKLFLGTKVATDSVTDKGFY 55


>gi|329890683|ref|ZP_08269026.1| alanyl-tRNA synthetase [Brevundimonas diminuta ATCC 11568]
 gi|328845984|gb|EGF95548.1| alanyl-tRNA synthetase [Brevundimonas diminuta ATCC 11568]
          Length = 881

 Score = 41.6 bits (96), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 35/147 (23%), Positives = 65/147 (44%), Gaps = 12/147 (8%)

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIE 123
           E  R      HS AH+   AV+++        G +++ +   +DF    P + +E+A++E
Sbjct: 554 EGSRPTTRANHSAAHLFHAAVKNVLGAHVAQKGQMVDAERMRFDFSHNAPMTDEEIARVE 613

Query: 124 KKMQEIIARDSPFLKQYLSHE-----KARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
            ++  +I ++ P   + ++ +      A  LF  +K   +V +L    A      Y    
Sbjct: 614 DEVNAVIRQNVPVTTELMTPDAAIAAGAVALF-GEKYGDEVRVLTIGRALSGPGAYS--- 669

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAG 205
             +LC G HV  TG +   FK++   G
Sbjct: 670 -VELCGGTHVFRTGDI-ALFKIVSEGG 694


>gi|260102998|ref|ZP_05753235.1| serine-tRNA ligase [Lactobacillus helveticus DSM 20075]
 gi|260083209|gb|EEW67329.1| serine-tRNA ligase [Lactobacillus helveticus DSM 20075]
          Length = 457

 Score = 41.6 bits (96), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 31/151 (20%), Positives = 65/151 (43%), Gaps = 4/151 (2%)

Query: 282 YMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           ++    KD Y E+  P +++    Q +G +  +  +++ +   DD  K  R   L P   
Sbjct: 203 FLDENTKDGYTEVIPPYLVNDASMQGTGQFPKFHEDVYTIVDNDDPDKP-RDLTLIPTAE 261

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKE 398
              V  F + +    +LP+ +      +R+E   +     GL+R+  F + +    C  +
Sbjct: 262 VPLVNYFRNEIIHENKLPINVTALSQAFRSEAGSAGRDTRGLIRMHEFRKVEMVKVCKPD 321

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
           + ++E  K+ +    + +  G    +V LST
Sbjct: 322 ESWDELEKLTHNAEHLLQKLGLPYHVVALST 352


>gi|317505218|ref|ZP_07963150.1| alanine--tRNA ligase [Prevotella salivae DSM 15606]
 gi|315663647|gb|EFV03382.1| alanine--tRNA ligase [Prevotella salivae DSM 15606]
          Length = 916

 Score = 41.6 bits (96), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 34/137 (24%), Positives = 61/137 (44%), Gaps = 9/137 (6%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEK 124
           + R+ +   H+  H++  A++ I  +     G  ++     +DF   Q  S ++L Q+E+
Sbjct: 597 EKRNGSAANHTATHLLDYALKQILGDHVEQKGSYVDPTTLRFDFSHFQKVSDEQLRQVER 656

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
            + ++I  D P        E      E  KE   V +       + V + R G   + C 
Sbjct: 657 LVNKMIREDYPL------DEHRDTPLEEAKELGAVALFGE-KYGDKVRVVRFGPSCEFCG 709

Query: 185 GPHVRSTGQVKKFFKLM 201
           G H +STGQ+  FFK++
Sbjct: 710 GIHAKSTGQI-GFFKII 725


>gi|262527560|sp|B1HUK4|SYA_LYSSC RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
          Length = 908

 Score = 41.6 bits (96), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 36/152 (23%), Positives = 71/152 (46%), Gaps = 11/152 (7%)

Query: 56  EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPF 114
           E +++ I   D R+L +  H+  HIM  A++ +  + V  A   +  D   +DF      
Sbjct: 577 EDAVQAIVHRDDRNLIIKNHTATHIMQRALKDVLGDHVNQAGSYVGPDRLRFDFSHFGQV 636

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
           + +EL QIE+ + E +  D   + + ++ ++A+        A     L      + V + 
Sbjct: 637 TKEELQQIERIVNEKVWDDIEVVIEEMAIDQAK--------AKGAMALFGEKYGDVVRVV 688

Query: 175 RQGEW-FDLCRGPHVRSTGQVKKFFKLMKVAG 205
             G++  +LC G HV+ + ++  FFK++   G
Sbjct: 689 SIGDYSIELCGGIHVKRSSEI-GFFKIVSEGG 719


>gi|283797723|ref|ZP_06346876.1| phosphoribulokinase family protein [Clostridium sp. M62/1]
 gi|291074619|gb|EFE11983.1| phosphoribulokinase family protein [Clostridium sp. M62/1]
          Length = 551

 Score = 41.6 bits (96), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 45/193 (23%), Positives = 80/193 (41%), Gaps = 13/193 (6%)

Query: 9   FPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDP 67
           +P+G     P  A  +D  E +S  +    + V  NG++ +LS  ++ +  I +IT  D 
Sbjct: 13  YPEG----MPYSAIAADFREKVSHDI----LLVRANGRLRELSKKLKGDCEISLITAADR 64

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQV---AIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
                 + S   +M +A        +V    +   +  G Y + + E    S  L  ++ 
Sbjct: 65  EGWQTYQRSAVFLMLKAFYDTVGGDKVKKITVCFSVGQGLYVEPEGEFDLDSSLLKNVKA 124

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
           +M E+ +   P +KQ ++  +A E F  +   Y  E L        V +Y  G + D   
Sbjct: 125 RMGELQSMCLPIIKQSVNTSEAVEQFH-RHRMYDKEKLFRFRRASRVNVYSIGNFQDYFY 183

Query: 185 GPHVRSTGQVKKF 197
           G  V  TG +K +
Sbjct: 184 GYMVEHTGFIKYY 196


>gi|260881197|ref|ZP_05403859.2| alanine--tRNA ligase [Mitsuokella multacida DSM 20544]
 gi|260849786|gb|EEX69793.1| alanine--tRNA ligase [Mitsuokella multacida DSM 20544]
          Length = 871

 Score = 41.6 bits (96), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 37/156 (23%), Positives = 74/156 (47%), Gaps = 24/156 (15%)

Query: 54  VREGSIEI-----ITPEDPRSLAVIR-HSCAHIMAEAVQSI-WPEVQVAIGPIIEDGFYY 106
           V EG +++     I  +  + LA  R H+  H++  A++ +   +V  A   +  D   +
Sbjct: 531 VEEGQLKVGETVKIEVDQEKKLASARNHTATHLLQAALKKVVGDQVNQAGSSVTPDRLRF 590

Query: 107 DFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEI 161
           DF   +P ++ +LA +E  + ++I +       ++S ++A++     LF S+K    V +
Sbjct: 591 DFTNFEPVTAQQLADVEALVNKVILKGQDVEISHMSLDEAKKAGAMALF-SEKYGDVVRV 649

Query: 162 LESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
           +  +P          G   +LC G HV++ GQ+  F
Sbjct: 650 VR-VP----------GFSMELCAGSHVKNVGQIGMF 674


>gi|317050904|ref|YP_004112020.1| alanyl-tRNA synthetase [Desulfurispirillum indicum S5]
 gi|316945988|gb|ADU65464.1| alanyl-tRNA synthetase [Desulfurispirillum indicum S5]
          Length = 893

 Score = 41.6 bits (96), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 32/137 (23%), Positives = 63/137 (45%), Gaps = 21/137 (15%)

Query: 72  VIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSDELAQIEKKMQEII 130
            + HS  H++  A++S   E     G ++EDG   +DF   +  + +EL  +E ++   +
Sbjct: 578 TLNHSATHLLHAALKSTVGEHVRQAGSLVEDGKLRFDFTHWKGLTPEELQGVEDQVNAQV 637

Query: 131 ARDSPFLKQYLSHEKA-----RELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCR 184
             +    K+ ++ + A       LF+ K               ++V +   G++  +LC 
Sbjct: 638 MANHAVRKELMTLDDAVARGATALFDEKY-------------GDDVRVITMGDYSMELCG 684

Query: 185 GPHVRSTGQVKKFFKLM 201
           G HV +TGQ+   FK++
Sbjct: 685 GTHVDATGQI-GLFKIL 700


>gi|269123200|ref|YP_003305777.1| alanyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
 gi|268314526|gb|ACZ00900.1| alanyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
          Length = 865

 Score = 41.6 bits (96), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 32/142 (22%), Positives = 65/142 (45%), Gaps = 10/142 (7%)

Query: 59  IEIITPEDPRSLAVIR--HSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFS 115
           IE I   D +    I+  H+  H++ + ++ +        G ++ +DG  +DF   +  S
Sbjct: 538 IEYILEVDKKRRNDIKKNHTATHLLHKVLKDVLGSAVEQAGSLVSDDGLRFDFSYYEQVS 597

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            +++  IE K+ E+I  + P    Y+++E   +  +    A   +    +    +++   
Sbjct: 598 QEQVNIIENKVNELILENLPV---YINYENINDAVKKGAMALFSDKYGDVVRVIDIS--- 651

Query: 176 QGEWFDLCRGPHVRSTGQVKKF 197
            G   +LC G HV STG++  F
Sbjct: 652 -GVSLELCGGTHVSSTGEIGLF 672


>gi|302206413|gb|ADL10755.1| Putative prolyl-tRNA synthetase [Corynebacterium pseudotuberculosis
           C231]
 gi|302330969|gb|ADL21163.1| Putative prolyl-tRNA synthetase [Corynebacterium pseudotuberculosis
           1002]
 gi|308276656|gb|ADO26555.1| Putative prolyl-tRNA synthetase [Corynebacterium pseudotuberculosis
           I19]
          Length = 585

 Score = 41.6 bits (96), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 39/174 (22%), Positives = 73/174 (41%), Gaps = 18/174 (10%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R     +I     GV  W   G +  + + + +R ++     +E+  P 
Sbjct: 19  DAEVPSHKLLVRAG---YIRRAAPGVYTWLPLGLRTLKKIENIVREEMDGIGAQELLFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L +  +Q +  W  Y  ++F +K  D    D        +  P H  +F   +K    S
Sbjct: 76  LLPREPYQATNRWTEYGDSLFRLK--DRKGADY-------LLGPTHEEMFAGAVKDMYSS 126

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
           Y++ PV L +  + YR+E      G++R R F   D++ F   +       + H
Sbjct: 127 YKDFPVTLYQIQTKYRDEER-PRAGILRGREFVMKDSYSFDMTDDGLESSYQRH 179


>gi|242309901|ref|ZP_04809056.1| prolyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489]
 gi|239523198|gb|EEQ63064.1| prolyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489]
          Length = 578

 Score = 41.6 bits (96), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 36/161 (22%), Positives = 72/161 (44%), Gaps = 11/161 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I + GSG+  +   G ++   +   +++++ +    E+    V    LWQ SG ++ Y  
Sbjct: 32  IQQIGSGIYNFLPLGKRVLDKISKIVKQEMDNAGANEVLLGCVTPASLWQASGRYERYGK 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            +   K   +       F   P +      +    +KSY++LP+ L +  + +R+E    
Sbjct: 92  ELLRFKDRKEN-----EFVFGPTHEETITELVKTYVKSYKQLPLHLYQIQTKFRDEIRPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTK----EQMFNECLKIHNLIIS 413
             GLMR R F   D + F +     ++ F+E  + +++I S
Sbjct: 147 F-GLMRGREFIMKDGYSFHSSYEDLKREFDEMERTYSVIFS 186


>gi|90420928|ref|ZP_01228833.1| alanyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1]
 gi|90334903|gb|EAS48675.1| alanyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1]
          Length = 890

 Score = 41.6 bits (96), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 32/144 (22%), Positives = 66/144 (45%), Gaps = 12/144 (8%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSD 117
           +++I     R+     HS  H++ E ++ I        G ++  +   +DF   +P    
Sbjct: 548 LDLIVDHGRRTKIRANHSATHLLHEGLREILGSHVAQKGSMVAPERLRFDFSHPKPIEPG 607

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEK-----ARELFESKKEAYKVEILESIPAKENVT 172
           ELA++E+    I+ +++P   + ++ +      A  LF  +K   +V ++     +E   
Sbjct: 608 ELAEVERLANGIVLQNAPVETRLMAVDDAIASGAMALF-GEKYGDEVRVVSMGTGEEG-- 664

Query: 173 LYRQGEWF--DLCRGPHVRSTGQV 194
             + G+ F  +LC G HV +TG +
Sbjct: 665 -EKAGKTFSIELCGGTHVNATGDI 687


>gi|328464544|gb|EGF35915.1| seryl-tRNA synthetase [Lactobacillus helveticus MTCC 5463]
          Length = 435

 Score = 41.2 bits (95), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 31/151 (20%), Positives = 65/151 (43%), Gaps = 4/151 (2%)

Query: 282 YMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           ++    KD Y E+  P +++    Q +G +  +  +++ +   DD  K  R   L P   
Sbjct: 181 FLDENTKDGYTEVIPPYLVNDASMQGTGQFPKFHEDVYTIVDNDDPDKP-RDLTLIPTAE 239

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKE 398
              V  F + +    +LP+ +      +R+E   +     GL+R+  F + +    C  +
Sbjct: 240 VPLVNYFRNEIIHENKLPINVTALSQAFRSEAGSAGRDTRGLIRMHEFRKVEMVKVCKPD 299

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
           + ++E  K+ +    + +  G    +V LST
Sbjct: 300 ESWDELEKLTHNAEHLLQKLGLPYHVVALST 330


>gi|152990768|ref|YP_001356490.1| prolyl-tRNA synthetase [Nitratiruptor sp. SB155-2]
 gi|166980135|sp|A6Q3S4|SYP_NITSB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|151422629|dbj|BAF70133.1| prolyl-tRNA synthetase [Nitratiruptor sp. SB155-2]
          Length = 569

 Score = 41.2 bits (95), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 63/143 (44%), Gaps = 7/143 (4%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  SG+  +   G K+   + + ++ ++ K   +E++   V    LW++SG    Y  
Sbjct: 32  ITQVASGIYNFLPIGKKVLDKIRAIVKEELDKAGCQEVSLGFVTPCELWEESGRLGKYGK 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            +   K   +       F L P +    V +  + + SY++LP+ L +    +R+E    
Sbjct: 92  ELLRFKDRKEN-----CFVLGPTHEEMMVDLVRNRVTSYKQLPLNLYQINWKFRDEARPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQ 399
             GL+R R F   D + F   E+
Sbjct: 147 F-GLLRGREFLMKDGYSFHADEE 168


>gi|295092053|emb|CBK78160.1| Uridine kinase [Clostridium cf. saccharolyticum K10]
          Length = 551

 Score = 41.2 bits (95), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 45/193 (23%), Positives = 80/193 (41%), Gaps = 13/193 (6%)

Query: 9   FPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDP 67
           +P+G     P  A  +D  E +S  +    + V  NG++ +LS  ++ +  I +IT  D 
Sbjct: 13  YPEG----MPYSAIAADFREKVSHDI----LLVRANGRLRELSKKLKGDCEISLITAADR 64

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQV---AIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
                 + S   +M +A        +V    +   +  G Y + + E    S  L  ++ 
Sbjct: 65  EGWQTYQRSAVFLMLKAFYDTVGGDKVKKITVCFSVGQGLYVEPEGEFDLDSSLLKNVKA 124

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
           +M E+ +   P +KQ ++  +A E F  +   Y  E L        V +Y  G + D   
Sbjct: 125 RMGELQSMCLPIIKQSVNTSEAVEQFH-RHRMYDKEKLFRFRRASRVNVYSIGNFQDYFY 183

Query: 185 GPHVRSTGQVKKF 197
           G  V  TG +K +
Sbjct: 184 GYMVEHTGFIKYY 196


>gi|294645076|ref|ZP_06722802.1| proline--tRNA ligase [Bacteroides ovatus SD CC 2a]
 gi|292639582|gb|EFF57874.1| proline--tRNA ligase [Bacteroides ovatus SD CC 2a]
          Length = 447

 Score = 41.2 bits (95), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 63/300 (21%), Positives = 128/300 (42%), Gaps = 56/300 (18%)

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECL 405
            + + ++SYR+LP+   ++ +V+R E    L   +R   F   + H    T+E+   E +
Sbjct: 84  TYKNWIQSYRDLPILCNQWANVFRWEMRTRL--FLRTAEFLWQEGHTAHATREEAEEEAI 141

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
           ++ N    +Y +F  EK M                   A  ++KGV      S+ +R   
Sbjct: 142 RMLN----VYGEFA-EKYM-------------------AVPVVKGV-----KSANERF-- 170

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIH 524
                 GA      E +++D  G+  Q GT   +  N    F+  +VN  ++  +   + 
Sbjct: 171 -----AGALDTYTIEAMMQD--GKALQSGTSHFLGQNFAKAFDVQFVNKENKLEY---VW 220

Query: 525 RAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTITSSAVEYAQEIANL------ 574
              +G   R +G +I     +    LP  L+PIQ ++  I  +  +  Q  A +      
Sbjct: 221 ATSWGVSTRLMGALIMTHSDDNGLVLPPHLAPIQVVIVPIYKNDEQLKQIDAKVEGIVAK 280

Query: 575 LKSHHLSIETD-FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
           LK+  +S++ D   N+   +K  ++ +K +P+ ++ G ++    ++ + R  +   + V+
Sbjct: 281 LKALGISVKYDNADNKRPGFKFADYELKGVPVRLVMGGRDLENNTMEVMRRDTLEKETVT 340


>gi|225389081|ref|ZP_03758805.1| hypothetical protein CLOSTASPAR_02827 [Clostridium asparagiforme
           DSM 15981]
 gi|225044859|gb|EEG55105.1| hypothetical protein CLOSTASPAR_02827 [Clostridium asparagiforme
           DSM 15981]
          Length = 887

 Score = 41.2 bits (95), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 32/132 (24%), Positives = 61/132 (46%), Gaps = 10/132 (7%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSDELAQIEKKM 126
           R+L    HS  H++ +A++ +  E     G  ++ G   +DF      + +EL ++E+ +
Sbjct: 567 RALTCQNHSATHLLQKALRLVLGEHVKQSGSYVDAGRLRFDFTHFSAMTPEELGKVEELV 626

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRG 185
            + I    P   Q ++      L E+KK        E     ++V + + G++  +LC G
Sbjct: 627 NQEIRAGLPVETQVMT------LDEAKKTGAMALFGEKYG--DSVRVVKMGDFSTELCGG 678

Query: 186 PHVRSTGQVKKF 197
            HV +TG +  F
Sbjct: 679 THVANTGSIASF 690


>gi|302670706|ref|YP_003830666.1| RelA/SpoT family protein [Butyrivibrio proteoclasticus B316]
 gi|302395179|gb|ADL34084.1| RelA/SpoT family protein [Butyrivibrio proteoclasticus B316]
          Length = 760

 Score = 41.2 bits (95), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 1/66 (1%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEII 62
           D+    P G +KN P  +T  D A S+  ++  K +   +NGK+  +   ++ G  IEI+
Sbjct: 418 DVYCFTPTGEVKNLPAGSTPIDFAYSVHSAVGNKMIGAKVNGKLVPIDYKIQNGDRIEIV 477

Query: 63  TPEDPR 68
           T ++ R
Sbjct: 478 TSQNSR 483


>gi|323485946|ref|ZP_08091279.1| hypothetical protein HMPREF9474_03030 [Clostridium symbiosum
           WAL-14163]
 gi|323693057|ref|ZP_08107277.1| hypothetical protein HMPREF9475_02140 [Clostridium symbiosum
           WAL-14673]
 gi|323400736|gb|EGA93101.1| hypothetical protein HMPREF9474_03030 [Clostridium symbiosum
           WAL-14163]
 gi|323502938|gb|EGB18780.1| hypothetical protein HMPREF9475_02140 [Clostridium symbiosum
           WAL-14673]
          Length = 761

 Score = 41.2 bits (95), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 1/60 (1%)

Query: 10  PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPEDPR 68
           P G +KN P  +T  D A SI  ++  K V   +NGK+ ++   ++ G  IEIIT ++ +
Sbjct: 421 PTGDVKNLPSGSTPIDFAYSIHSAVGNKMVGARVNGKLVNIDYVIQNGDRIEIITSQNSK 480


>gi|160871945|ref|ZP_02062077.1| alanyl-tRNA synthetase [Rickettsiella grylli]
 gi|159120744|gb|EDP46082.1| alanyl-tRNA synthetase [Rickettsiella grylli]
          Length = 871

 Score = 41.2 bits (95), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 58/138 (42%), Gaps = 16/138 (11%)

Query: 66  DP--RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQI 122
           DP  R    + HS  H++   ++ I     +  G ++E +   +DF    P + ++L  I
Sbjct: 544 DPKKRHATTLNHSATHLLHAVLREILGTQVMQKGSLVEPERLRFDFSYSSPLTCEQLKLI 603

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK--ENVTLYRQGEWF 180
           E ++   I  + P + Q +S E A+          K   L     K   NV +   G + 
Sbjct: 604 ENRVNWQIRANLPVVTQVMSMEDAK----------KAGALALFGEKYGNNVRVLTIGTFS 653

Query: 181 -DLCRGPHVRSTGQVKKF 197
            +LC G HV  TG +  F
Sbjct: 654 KELCGGTHVSQTGDIGLF 671


>gi|317153777|ref|YP_004121825.1| RelA/SpoT family protein [Desulfovibrio aespoeensis Aspo-2]
 gi|316944028|gb|ADU63079.1| RelA/SpoT family protein [Desulfovibrio aespoeensis Aspo-2]
          Length = 726

 Score = 41.2 bits (95), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 1/58 (1%)

Query: 10  PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPED 66
           P G IK  P  AT  D A +I   +  K     +NG++  L  P++ G S+EIIT ++
Sbjct: 399 PSGDIKELPEGATPVDFAYAIHSEVGDKCAGAKVNGRIVPLHSPLKNGDSVEIITDKN 456


>gi|293604526|ref|ZP_06686931.1| alanine--tRNA ligase [Achromobacter piechaudii ATCC 43553]
 gi|292817107|gb|EFF76183.1| alanine--tRNA ligase [Achromobacter piechaudii ATCC 43553]
          Length = 874

 Score = 41.2 bits (95), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 34/144 (23%), Positives = 68/144 (47%), Gaps = 20/144 (13%)

Query: 68  RSLAVIRHSCAHIMAEAV-QSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKM 126
           R+  V  HS  H+M +A+ Q +   VQ     +  +   +DF ++ P +++++A++E  +
Sbjct: 555 RARTVRNHSATHLMHKALRQVLGAHVQQRGSLVDAEKTRFDFAQDAPMTAEQIARVEAIV 614

Query: 127 QEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
              +  + P + Q ++++ A +     LF  +K    V +L+   ++E            
Sbjct: 615 NAEVLANQPTVAQVMAYDDAVKGGAMALF-GEKYGDTVRVLDIGFSRE------------ 661

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAG 205
           LC G HV  TG +   FK++   G
Sbjct: 662 LCGGTHVSRTGDI-GLFKIVSEGG 684


>gi|253997271|ref|YP_003049335.1| alanyl-tRNA synthetase [Methylotenera mobilis JLW8]
 gi|253983950|gb|ACT48808.1| alanyl-tRNA synthetase [Methylotenera mobilis JLW8]
          Length = 878

 Score = 41.2 bits (95), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 65/143 (45%), Gaps = 18/143 (12%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKM 126
           R+  +  HS  H+M +A++ +  E     G +++ D   +DF    P + DE+A++E+ +
Sbjct: 560 RTNTMRNHSATHLMHKALREVLGEHVQQKGSLVDTDKTRFDFVHTAPMTDDEIAKVEQIV 619

Query: 127 QEIIARDSPFLKQYLSHEKARE----LFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
              I  ++    + +  E A+     +   +K   +V +L+   ++E            L
Sbjct: 620 NAEILANAACQARVMDIESAQNTGAMMLFGEKYGDEVRVLDIGSSRE------------L 667

Query: 183 CRGPHVRSTGQVKKFFKLMKVAG 205
           C G HV  TG +   FK+   +G
Sbjct: 668 CGGTHVNRTGDI-GLFKITSESG 689


>gi|229817161|ref|ZP_04447443.1| hypothetical protein BIFANG_02420 [Bifidobacterium angulatum DSM
           20098]
 gi|229784950|gb|EEP21064.1| hypothetical protein BIFANG_02420 [Bifidobacterium angulatum DSM
           20098]
          Length = 637

 Score = 41.2 bits (95), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 37/172 (21%), Positives = 72/172 (41%), Gaps = 12/172 (6%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK 322
           G+  W   G  +   + + +R ++   + +E++   +L +  ++ +  W+ Y  N+F +K
Sbjct: 73  GIWTWLPLGLNVLNKIENIIREEMASINAQEVHFSGLLPREPYEATHRWEEYGDNIFRLK 132

Query: 323 CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE--PSGSLHGL 380
              +       + L P +      +      SY++LPV L +  + YR+E  P     GL
Sbjct: 133 DRHEA-----DYLLAPTHEEMFTLLVKDLYSSYKDLPVTLYQIQTKYRDEFRPRA---GL 184

Query: 381 MRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP 431
           +R R F   DA+ F   KE +    +        I+K    + + V     P
Sbjct: 185 IRGREFIMKDAYSFTLDKEGLVKAYMDERGAYERIFKRLDLDYVPVHAMAGP 236


>gi|308158015|gb|EFO60895.1| Glycyl-tRNA synthetase [Giardia lamblia P15]
          Length = 621

 Score = 41.2 bits (95), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 1/56 (1%)

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQ 388
           T  L+P    G    F  GL+  ++LP  +A+ G+V+RNE S   + L+RVR F Q
Sbjct: 176 TVYLRPETAQGIFMNFKRGLEQAKQLPFAMAQVGTVFRNEISPR-NSLLRVREFEQ 230


>gi|16126768|ref|NP_421332.1| alanyl-tRNA synthetase [Caulobacter crescentus CB15]
 gi|221235548|ref|YP_002517985.1| alanyl-tRNA synthetase [Caulobacter crescentus NA1000]
 gi|20532261|sp|Q9A5C1|SYA_CAUCR RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|13424088|gb|AAK24500.1| alanyl-tRNA synthetase [Caulobacter crescentus CB15]
 gi|220964721|gb|ACL96077.1| alanyl-tRNA synthetase [Caulobacter crescentus NA1000]
          Length = 880

 Score = 41.2 bits (95), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 65/140 (46%), Gaps = 14/140 (10%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG--FYYDFDKEQPFSSDELAQIE 123
           D R+     HS AH++  A+  +        G ++ DG    +DF    P +++EL +IE
Sbjct: 554 DRRNTTRSNHSAAHLVHAALHHVLGPHVAQKGQMV-DGERMRFDFSHGGPLTAEELDRIE 612

Query: 124 KKMQEIIARDSPFLKQYLSHEKARE-----LFESK-KEAYKVEILESIPAKENVTLYRQG 177
            ++ E+I ++ P   + ++ ++A E     LF  K  ++ +V  L    A E      + 
Sbjct: 613 AEVNEVIRQNVPAETKEMAPQEAIEAGAVALFGEKYGDSVRVLTLGKSLADEA-----KA 667

Query: 178 EWFDLCRGPHVRSTGQVKKF 197
              +LC G HV  TG +  F
Sbjct: 668 YSVELCGGTHVARTGDIALF 687


>gi|322700868|gb|EFY92620.1| prolyl-tRNA synthetase [Metarhizium acridum CQMa 102]
          Length = 556

 Score = 41.2 bits (95), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 73/369 (19%), Positives = 145/369 (39%), Gaps = 35/369 (9%)

Query: 275 IFQTLISYMRRKIKD-DYEEINTPQVLDQ-HLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           I+ T+  +    I++   EE + P  L +  L ++  H D +   +  V+ A D   D+ 
Sbjct: 90  IWSTIRKWFSGHIEELGVEEASFPLFLSKTSLDKEKDHVDGFAPELAWVERAGDKKLDV- 148

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
             A++P +       +   ++S+R+LP+RL ++ SV R E   +    +R R F   + H
Sbjct: 149 PVAIRPTSEAVMYPYYAKWIRSHRDLPLRLNQWNSVVRWEAKQTTP-FLRTREFLWQEGH 207

Query: 393 V-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
               T+E    E L+I  L   +Y+      ++    T  EK  G           ++G 
Sbjct: 208 TAHLTEELAGEEVLEILELYAGVYEKLLAVPVVRGKKTENEKFAGGYYT-----TTVEGY 262

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
           + +  N    +  T   LG+   +   F+  ++D   +       Q  + L +R     V
Sbjct: 263 IPS--NGRGIQGATSHCLGQN--FSKMFQITVEDPQNKGQHVHVWQNSWGLSTRVIGVMV 318

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
             H +    V+  R     +     I I            P+     T      ++  +I
Sbjct: 319 MVHGDDKGLVLPPRVAQTQV-----IFI------------PVGINKNTTPEDRQKHEDQI 361

Query: 572 ANL---LKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGST 627
            ++   LK   +  ++D+R   T  +K  +  +K +P+ +  G K+A++  +   R  + 
Sbjct: 362 EDMRATLKKAGVRTQSDWREGYTPAWKFNDWEMKGVPVRLEFGPKDAAKEVVSFARRDTG 421

Query: 628 TTQKVSLLD 636
               + + D
Sbjct: 422 EKGTIPIAD 430


>gi|260222905|emb|CBA32940.1| Alanyl-tRNA synthetase [Curvibacter putative symbiont of Hydra
           magnipapillata]
          Length = 878

 Score = 41.2 bits (95), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 33/139 (23%), Positives = 63/139 (45%), Gaps = 10/139 (7%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKM 126
           R+  V  HS  H+M +A++ +  E VQ     +  +   +DF    P +++++ QIE K+
Sbjct: 561 RAATVRNHSATHLMHKALREVLGEHVQQKGSLVNAERTRFDFAHNAPVTAEQIRQIEAKV 620

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGP 186
                 ++  L    +  +  ++  ++K    +   E     E V +   G   +LC G 
Sbjct: 621 ------NAEVLANAAAQARVMDIESAQKTGAMMLFGEKY--GETVRVLDIGSSRELCGGT 672

Query: 187 HVRSTGQVKKFFKLMKVAG 205
           HV +TG +   FK++   G
Sbjct: 673 HVHATGDI-GLFKVVGEGG 690


>gi|256271449|gb|EEU06503.1| YER087W-like protein [Saccharomyces cerevisiae JAY291]
          Length = 576

 Score = 41.2 bits (95), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 34/160 (21%), Positives = 72/160 (45%), Gaps = 15/160 (9%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKDDYE--EINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           G+  W   G +    + + +R ++  D    E++   +  + LWQ +  W++  + +F +
Sbjct: 45  GLFQWLPLGLRSLNKVSNAIRNRMDSDGGAIEVSLSAISSKALWQATDRWNN--SELFKL 102

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE--PSGSLHG 379
           K +       + + L          +  + + SY+++P+ + +    YR+E  P G   G
Sbjct: 103 KDSKG-----KQYCLTATCEEDITDLMKNYIASYKDMPITIYQMTRKYRDEIRPRG---G 154

Query: 380 LMRVRGFTQDDAHVFCTKEQ-MFNECLKIHNLIISIYKDF 418
           ++R R F   DA+ F + E+  F    K+ +    I+KD 
Sbjct: 155 ILRGREFLMKDAYSFASNEEDAFASFQKLDDTYNKIFKDL 194


>gi|187607298|ref|NP_001120088.1| prolyl-tRNA synthetase 2, mitochondrial (putative) [Xenopus
           (Silurana) tropicalis]
 gi|165971208|gb|AAI58530.1| LOC100145097 protein [Xenopus (Silurana) tropicalis]
          Length = 466

 Score = 41.2 bits (95), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 69/379 (18%), Positives = 145/379 (38%), Gaps = 61/379 (16%)

Query: 274 KIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           +  + LI  + ++++D   ++I+ P +    LW+QSG WD     +F +       +  +
Sbjct: 87  RAMEKLIRLIDKEMQDIGGQKIDMPTLSSAALWRQSGRWDLMGKELFRL-----MDRHNQ 141

Query: 333 TFALKPMN--CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
            + L P +     H+     G+ + +ELP+ L +    +R+E      GL+R R F   D
Sbjct: 142 EYCLGPTHEEAVTHLVASEGGINN-KELPLLLYQITRKFRDEQRPCF-GLLRGREFYMKD 199

Query: 391 AHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST-----------RPEKRVGSD 438
            + F  + E  +     + +   +I++  G   + V+  T                +G D
Sbjct: 200 MYTFDISDESAYETYRNVCDAYTNIFRALGVRFVKVQADTGNIGGKMSHEFHLPANIGED 259

Query: 439 ALWDDAENIMKGVLDTIKN--------SSQDRINTGVLLGEGAFYGPKFEYILKDAIGRD 490
            L           ++ +++        + Q +   G+ +G   + G K+ ++ K A   D
Sbjct: 260 RLLVCGSCDFSANVELLQHNEKNCPVCTGQLKETKGIEIGHTFYLGTKYSHVFK-ATCYD 318

Query: 491 WQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL 550
            Q      +                  C+ + + R +  S+E    ++ +    + P  +
Sbjct: 319 SQKTPFIAEMG----------------CYGIGVSRLLAASLE----VLSKEDDIHWPGLI 358

Query: 551 SPIQAIVTT----------ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +P Q  + +          IT S   Y + I ++      ++  D    TI  +++E  +
Sbjct: 359 APYQVCLISPKKGSKESEAITISETLYDEIIQSVPWLRDETVLDDRSYLTIGKRVKEAHM 418

Query: 601 KKIPIIIICGDKEASERSI 619
              P II+ G K     S+
Sbjct: 419 TGYPYIIVVGKKALETPSL 437


>gi|134302304|ref|YP_001122273.1| alanyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           WY96-3418]
 gi|205830098|sp|A4IZ01|SYA_FRATW RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|134050081|gb|ABO47152.1| alanyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           WY96-3418]
          Length = 865

 Score = 41.2 bits (95), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 33/133 (24%), Positives = 57/133 (42%), Gaps = 10/133 (7%)

Query: 67  PRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFSSDELAQIEKK 125
           PR      HS  H++ +A++ +        G ++ E+   +DF  ++  S  E+ QIE  
Sbjct: 546 PRLATAANHSATHLLHKALKLVLGGHAEQKGSLVDENRLRFDFTHDKAISRSEIEQIELL 605

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCR 184
           + + I  + P      S +KA+ L          E L      + V +   G++  +LC 
Sbjct: 606 VNQQIRANYPVTTIETSQQKAKSL--------GAEALFGEKYGDIVRVISMGDFSIELCG 657

Query: 185 GPHVRSTGQVKKF 197
           G HV  TG +  F
Sbjct: 658 GTHVAYTGDIGLF 670


>gi|159112161|ref|XP_001706310.1| Glycyl-tRNA synthetase [Giardia lamblia ATCC 50803]
 gi|157434405|gb|EDO78636.1| Glycyl-tRNA synthetase [Giardia lamblia ATCC 50803]
          Length = 621

 Score = 41.2 bits (95), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 1/56 (1%)

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQ 388
           T  L+P    G    F  GL+  ++LP  +A+ G+V+RNE S   + L+RVR F Q
Sbjct: 176 TVYLRPETAQGIFMNFKRGLEQAKQLPFAMAQVGTVFRNEISPR-NSLLRVREFEQ 230


>gi|238600099|ref|XP_002395053.1| hypothetical protein MPER_04961 [Moniliophthora perniciosa FA553]
 gi|215465118|gb|EEB95983.1| hypothetical protein MPER_04961 [Moniliophthora perniciosa FA553]
          Length = 127

 Score = 41.2 bits (95), Expect = 0.53,   Method: Composition-based stats.
 Identities = 28/118 (23%), Positives = 57/118 (48%), Gaps = 7/118 (5%)

Query: 43  INGKVCDLSDPVREG-SIEIITPEDPRSLA----VIRHSCAHIMAEAVQSIWPEVQVAIG 97
           ++G++ DL  P+     +E++  E P        V  HS AH++ EA +  +    + +G
Sbjct: 1   VDGELWDLERPLESSCKLELLDFEHPEGRRTGKRVFWHSSAHVLGEAAERHY-GCHLCLG 59

Query: 98  PIIEDGFYYDFD-KEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
           P  +DGF+Y+   +++P    +   +EK  +  +     F +  +S E   ++F  +K
Sbjct: 60  PPTDDGFFYEMGIQDRPVVEADYPALEKLSEMAVKDKQKFERLVVSKEDLLKMFGVRK 117


>gi|78223528|ref|YP_385275.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA [Geobacter
           metallireducens GS-15]
 gi|78194783|gb|ABB32550.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA [Geobacter
           metallireducens GS-15]
          Length = 716

 Score = 41.2 bits (95), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 1/63 (1%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI-E 60
           P ++ +  P+G +K+FP  +T  D A +I   L  + V   +NGK+  L   ++ G I E
Sbjct: 384 PEEVYVFTPNGDVKSFPKGSTPIDFAYTIHTDLGHRCVGAKVNGKLVPLKYELKNGDIVE 443

Query: 61  IIT 63
           +IT
Sbjct: 444 VIT 446


>gi|6320931|ref|NP_011010.1| Aim10p [Saccharomyces cerevisiae S288c]
 gi|731489|sp|P39965|SYPM_YEAST RecName: Full=Probable prolyl-tRNA synthetase, mitochondrial;
           AltName: Full=Altered inheritance rate of mitochondria
           protein 10; AltName: Full=Proline--tRNA ligase;
           Short=ProRS
 gi|603325|gb|AAB64642.1| Yer087wp [Saccharomyces cerevisiae]
 gi|285811719|tpg|DAA07747.1| TPA: Aim10p [Saccharomyces cerevisiae S288c]
          Length = 576

 Score = 41.2 bits (95), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 34/160 (21%), Positives = 72/160 (45%), Gaps = 15/160 (9%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKDDYE--EINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           G+  W   G +    + + +R ++  D    E++   +  + LWQ +  W++  + +F +
Sbjct: 45  GLFQWLPLGLRSLNKVSNAIRNRMDSDGGAIEVSLSAISSKALWQATDRWNN--SELFKL 102

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE--PSGSLHG 379
           K +       + + L          +  + + SY+++P+ + +    YR+E  P G   G
Sbjct: 103 KDSKG-----KQYCLTATCEEDITDLMKNYIASYKDMPITIYQMTRKYRDEIRPRG---G 154

Query: 380 LMRVRGFTQDDAHVFCTKEQ-MFNECLKIHNLIISIYKDF 418
           ++R R F   DA+ F + E+  F    K+ +    I+KD 
Sbjct: 155 ILRGREFLMKDAYSFASNEEDAFASFQKLDDTYNKIFKDL 194


>gi|268593120|ref|ZP_06127341.1| alanine--tRNA ligase [Providencia rettgeri DSM 1131]
 gi|291311391|gb|EFE51844.1| alanine--tRNA ligase [Providencia rettgeri DSM 1131]
          Length = 875

 Score = 41.2 bits (95), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 36/176 (20%), Positives = 75/176 (42%), Gaps = 33/176 (18%)

Query: 37  KAVAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAI 96
           +A ++ +N ++  + D  R  +I +             HS  H++  A++ +  +     
Sbjct: 538 EAGSLVVNHRITAVVDSARRDAIRL------------NHSATHLLHAALRQVLGDHVSQK 585

Query: 97  GPIIEDGFY-YDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LF 150
           G ++ D +  +DF   +  + ++L Q+E  +   I ++S    + +  E A+      LF
Sbjct: 586 GSLVNDKYLRFDFSHFEAMTQEQLRQVEDIVNAQIRKNSEIETELMDLEGAKAKGAMALF 645

Query: 151 ESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKFFKLMKVAG 205
             K E             E V +   G++  +LC G H R TG +   F+++  +G
Sbjct: 646 GEKYE-------------ERVRVLSMGDFSIELCGGTHARRTGDI-GLFRILSESG 687


>gi|323486958|ref|ZP_08092273.1| hypothetical protein HMPREF9474_04024 [Clostridium symbiosum
           WAL-14163]
 gi|323399730|gb|EGA92113.1| hypothetical protein HMPREF9474_04024 [Clostridium symbiosum
           WAL-14163]
          Length = 817

 Score = 41.2 bits (95), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 35/150 (23%), Positives = 71/150 (47%), Gaps = 11/150 (7%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSS 116
           ++ +   ++ R L    HS  H++ +A++++    V+ A   + +D   +DF      + 
Sbjct: 487 TVTLKVDKENRELTERNHSATHLLHKALRTVLGTHVEQAGSLVTKDRLRFDFTHFSAMTD 546

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
           +E+A +EK + + IA   P     ++      L E+KK        E     ++V + + 
Sbjct: 547 EEIAAVEKLVNDEIAAALPVETMVMT------LDEAKKTGAMALFGEKYG--DSVRVVKM 598

Query: 177 GEW-FDLCRGPHVRSTGQVKKFFKLMKVAG 205
           G++  +LC G HV +T  +   FK++  AG
Sbjct: 599 GDFSTELCGGTHVDNTSSISA-FKIVSEAG 627


>gi|300853486|ref|YP_003778470.1| hypothetical protein CLJU_c02840 [Clostridium ljungdahlii DSM
           13528]
 gi|300433601|gb|ADK13368.1| Conserved hypothetical protein containing an uridine kinase domain
           [Clostridium ljungdahlii DSM 13528]
          Length = 564

 Score = 41.2 bits (95), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 80/165 (48%), Gaps = 3/165 (1%)

Query: 38  AVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAI 96
            V   +N +  +L++ + + G+ +I+   D         +   ++ ++V  ++   +V I
Sbjct: 50  VVLAKVNEEYFELTNLLEKSGTFKIVDIRDKLGNKTYARTLQFVLIKSVYDLFKGAKVTI 109

Query: 97  GPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEA 156
              +  G + +  K+ P   +++ +I+KKM+EII +D P  K  ++ E+A E+F +    
Sbjct: 110 EHSLSKGIFGEIHKDTPLCEEDIKKIKKKMKEIIKQDIPIKKVGMTKERAIEIFRNYGME 169

Query: 157 YKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLM 201
            KV +L  +   E V LY     +D   G    STG V K F LM
Sbjct: 170 DKVRLLNYVNTDE-VKLYELDGRYDYFYGSMAFSTG-VLKVFDLM 212


>gi|161507947|ref|YP_001577911.1| seryl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
 gi|172048352|sp|A8YWU9|SYS_LACH4 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|160348936|gb|ABX27610.1| Seryl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
          Length = 435

 Score = 41.2 bits (95), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 31/151 (20%), Positives = 65/151 (43%), Gaps = 4/151 (2%)

Query: 282 YMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           ++    KD Y E+  P +++    Q +G +  +  +++ +   DD  K  R   L P   
Sbjct: 181 FLDENTKDGYTEVIPPYLVNDASMQGTGQFPKFHEDVYTIVDNDDPDKP-RDLTLIPTAE 239

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKE 398
              V  F + +    +LP+ +      +R+E   +     GL+R+  F + +    C  +
Sbjct: 240 VPLVNYFRNEIIHENKLPINVTALSPAFRSEAGSAGRDTRGLIRMHEFRKVEMVKVCKPD 299

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
           + ++E  K+ +    + +  G    +V LST
Sbjct: 300 ESWDELEKLTHNAEHLLQKLGLPYHVVALST 330


>gi|151944803|gb|EDN63062.1| conserved protein [Saccharomyces cerevisiae YJM789]
 gi|190405650|gb|EDV08917.1| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a]
 gi|259146006|emb|CAY79266.1| EC1118_1E8_2102p [Saccharomyces cerevisiae EC1118]
          Length = 576

 Score = 41.2 bits (95), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 34/160 (21%), Positives = 72/160 (45%), Gaps = 15/160 (9%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKDDYE--EINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           G+  W   G +    + + +R ++  D    E++   +  + LWQ +  W++  + +F +
Sbjct: 45  GLFQWLPLGLRSLNKVSNAIRNRMDSDGGAIEVSLSAISSKALWQATDRWNN--SELFKL 102

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE--PSGSLHG 379
           K +       + + L          +  + + SY+++P+ + +    YR+E  P G   G
Sbjct: 103 KDSKG-----KQYCLTATCEEDITDLMKNYIASYKDMPITIYQMTRKYRDEIRPRG---G 154

Query: 380 LMRVRGFTQDDAHVFCTKEQ-MFNECLKIHNLIISIYKDF 418
           ++R R F   DA+ F + E+  F    K+ +    I+KD 
Sbjct: 155 ILRGREFLMKDAYSFASNEEDAFASFQKLDDTYNKIFKDL 194


>gi|237798458|ref|ZP_04586919.1| synthetase, putative [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331021309|gb|EGI01366.1| synthetase, putative [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 264

 Score = 41.2 bits (95), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 41/68 (60%), Gaps = 2/68 (2%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEV-QVAIG-PIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           R+   + H+ +H +  A  S+  E+ Q  +G  I ED   +DF  E+PFS +E+++IE++
Sbjct: 124 RARLTLSHTASHFLYAAAVSLRKELKQWTLGCHIKEDSARFDFLVEKPFSIEEVSEIERR 183

Query: 126 MQEIIARD 133
             E+I R+
Sbjct: 184 ANELIVRN 191


>gi|225848695|ref|YP_002728858.1| alanyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225644297|gb|ACN99347.1| alanyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 875

 Score = 41.2 bits (95), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 40/163 (24%), Positives = 74/163 (45%), Gaps = 21/163 (12%)

Query: 46  KVCDLSDPVREGSIEIITPEDPRSLAVIRHSCA-HIMAEAVQSIWPEVQVAIGPIIEDGF 104
           KV  L   V+EG       +  R   ++RH  A H++  A+++I  +     G ++ D +
Sbjct: 538 KVKILFGTVKEGEFVRAKVDKERRENIMRHHTATHLLHSALRNILGDHVKQAGSLVSDEY 597

Query: 105 Y-YDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYK 158
             +DF   +  S +E+  IE+ +   I ++   + Q +S+E+A       +FE K     
Sbjct: 598 LRFDFTHFESLSDEEIKMIEEFVNREIMKNEEVVCQEMSYEEALNSGAIAIFEEK----- 652

Query: 159 VEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLM 201
                     + V +   G   +LC G HV+ TG +  +FK++
Sbjct: 653 --------YGDVVRVISAGVSKELCGGTHVKRTGDI-GYFKIL 686


>gi|153806270|ref|ZP_01958938.1| hypothetical protein BACCAC_00526 [Bacteroides caccae ATCC 43185]
 gi|149130947|gb|EDM22153.1| hypothetical protein BACCAC_00526 [Bacteroides caccae ATCC 43185]
          Length = 497

 Score = 41.2 bits (95), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 62/289 (21%), Positives = 123/289 (42%), Gaps = 56/289 (19%)

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLK 406
           + + ++SYR+LP+   ++ +V+R E    L   +R   F   + H    T+E+   E ++
Sbjct: 135 YKNWIQSYRDLPILCNQWANVFRWEMRTRL--FLRTAEFLWQEGHTAHATREEAEEEAVR 192

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           + N    +Y +F  EK M                   A  ++KGV      S+ +R    
Sbjct: 193 MLN----VYGEFA-EKYM-------------------AVPVVKGV-----KSANERF--- 220

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
                GA      E +++D  G+  Q GT   +  N    F+  +VN  ++  +   +  
Sbjct: 221 ----AGALDTYTIEAMMQD--GKALQSGTSHFLGQNFAKAFDVQFVNKENKLEY---VWA 271

Query: 526 AVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTITSSAVEYAQ------EIANLL 575
             +G   R +G +I     +    LP  L+PIQ ++  I  +  +  Q       I   L
Sbjct: 272 TSWGVSTRLMGALIMTHSDDNGLVLPPHLAPIQVVIIPIYKNDEQLKQIDAKVAGIVTKL 331

Query: 576 KSHHLSIETD-FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRR 623
           K+  +S++ D   N+   +K  ++ +K +P+ ++ G ++    ++ + R
Sbjct: 332 KALGISVKYDNADNKRPGFKFADYELKGVPVRLVMGGRDLENNTMEVMR 380


>gi|297564703|ref|YP_003683675.1| alanyl-tRNA synthetase [Meiothermus silvanus DSM 9946]
 gi|296849152|gb|ADH62167.1| alanyl-tRNA synthetase [Meiothermus silvanus DSM 9946]
          Length = 894

 Score = 41.2 bits (95), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 12/131 (9%)

Query: 75  HSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           H+  H++  A+++I    V+ A   +  D   +DF   +P S  ELA+IE  +   I  D
Sbjct: 579 HTATHLLHAALRAILGTHVRQAGSYVGPDRLRFDFTHPEPVSPRELARIELLVNRWIQGD 638

Query: 134 SPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWF--DLCRGP 186
            P    Y   E+A++     LF  +K A  V ++      +NV     G     +LC G 
Sbjct: 639 FPVSYTYKPLEEAKKEGAMALF-GEKYADVVRVVAVEGTADNVA---AGTAISKELCGGC 694

Query: 187 HVRSTGQVKKF 197
           HVR TG++  F
Sbjct: 695 HVRRTGEIGMF 705


>gi|300725879|ref|ZP_07059342.1| alanine--tRNA ligase [Prevotella bryantii B14]
 gi|299776816|gb|EFI73363.1| alanine--tRNA ligase [Prevotella bryantii B14]
          Length = 888

 Score = 41.2 bits (95), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 32/137 (23%), Positives = 62/137 (45%), Gaps = 9/137 (6%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSDELAQIEK 124
           D R+ +   H+  H++  A++ +  +     G  ++D    +DF   Q  + +E+ Q+E+
Sbjct: 569 DKRNGSAANHTATHLLDYALKQVLGDHVEQKGSYVDDKVLRFDFSHFQKVTDEEIRQVER 628

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
            +  +I +D P        E      E  KE   + +       + V + R G   + C 
Sbjct: 629 IVNAMIRQDLPL------DEHRDTPIEEAKELGAIALFGE-KYGDKVRVVRFGPSAEFCG 681

Query: 185 GPHVRSTGQVKKFFKLM 201
           G H +STG++  FFK++
Sbjct: 682 GIHAQSTGRI-GFFKII 697


>gi|197124169|ref|YP_002136120.1| cyclic nucleotide-binding protein [Anaeromyxobacter sp. K]
 gi|196174018|gb|ACG74991.1| cyclic nucleotide-binding protein [Anaeromyxobacter sp. K]
          Length = 715

 Score = 41.2 bits (95), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 43/178 (24%), Positives = 78/178 (43%), Gaps = 8/178 (4%)

Query: 22  TGSDVAESISRSLAKKAVAVAING-KVCDLSDPV-REGSIEIITPEDPRSLAVIRHSCAH 79
           TG+ V + +  ++    V   + G K   L+ PV  + ++  +T        V  HS   
Sbjct: 176 TGTRVRDLLPEAIEGDLVVAGLLGQKPVSLATPVFTDTTVAPLTVSHWEGRQVYAHSLGL 235

Query: 80  IMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK---MQEIIARDSPF 136
           ++ EA   + P ++V +GP +  G       E     D  A   +    M+ I+A D+PF
Sbjct: 236 VLLEAAHQVAPALRVRMGPSL--GVRQLVMVEGAGGEDRAALAARLAAGMERIVAADAPF 293

Query: 137 LKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQV 194
             +Y S ++A+  F  +  +    +L  +  +  V L   G+ + L  GP + STG +
Sbjct: 294 RSEYWSTDEAQGWFLERGWSDAARLLR-VRRQATVRLVSCGDVYALSMGPLLPSTGAL 350


>gi|71275909|ref|ZP_00652192.1| Alanyl-tRNA synthetase, class IIc [Xylella fastidiosa Dixon]
 gi|71899253|ref|ZP_00681415.1| Alanyl-tRNA synthetase, class IIc [Xylella fastidiosa Ann-1]
 gi|170729338|ref|YP_001774771.1| alanyl-tRNA synthetase [Xylella fastidiosa M12]
 gi|205830290|sp|B0U1K9|SYA_XYLFM RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|71163286|gb|EAO13005.1| Alanyl-tRNA synthetase, class IIc [Xylella fastidiosa Dixon]
 gi|71730986|gb|EAO33055.1| Alanyl-tRNA synthetase, class IIc [Xylella fastidiosa Ann-1]
 gi|167964131|gb|ACA11141.1| Alanine--tRNA ligase [Xylella fastidiosa M12]
          Length = 884

 Score = 41.2 bits (95), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 30/144 (20%), Positives = 63/144 (43%), Gaps = 20/144 (13%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKM 126
           R +  + HS  H++  A++S++       G ++  D   +DF   +P S+ ++  IE+ +
Sbjct: 565 RKMVALNHSATHLLHCALRSVFGTHVAQKGSLVAPDRLRFDFSHFEPISAAQMTLIERMV 624

Query: 127 QEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
            + +  +   + + +  + A +     LF  K               E+V + + G   +
Sbjct: 625 NDEVRANHLVMIEQMGMQAALDAGAMALFGEKY-------------GEHVRVVKMGTSVE 671

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAG 205
           LC G H+  TG +   FK++   G
Sbjct: 672 LCGGTHITRTGDI-GLFKIISECG 694


>gi|290953862|ref|ZP_06558483.1| alanyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           URFT1]
 gi|295312765|ref|ZP_06803502.1| alanyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           URFT1]
          Length = 804

 Score = 41.2 bits (95), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 33/136 (24%), Positives = 58/136 (42%), Gaps = 10/136 (7%)

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFSSDELAQI 122
            + PR      HS  H++ +A++ +        G ++ E+   +DF  ++  S  E+ QI
Sbjct: 482 SDKPRLATAANHSATHLLYKALKLVLGGHAEQKGSLVDENRLRFDFTHDKAISRSEIEQI 541

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FD 181
           E  + + I  + P      S +KA+ L          E L      + V +   G++  +
Sbjct: 542 ELLVNQQIRANYPVTTIETSQQKAKSL--------GAEALFGEKYGDIVRVISMGDFSIE 593

Query: 182 LCRGPHVRSTGQVKKF 197
           LC G HV  TG +  F
Sbjct: 594 LCGGTHVAYTGDIGLF 609


>gi|163736400|ref|ZP_02143819.1| alanyl-tRNA synthetase [Phaeobacter gallaeciensis BS107]
 gi|161390270|gb|EDQ14620.1| alanyl-tRNA synthetase [Phaeobacter gallaeciensis BS107]
          Length = 883

 Score = 41.2 bits (95), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 43/176 (24%), Positives = 76/176 (43%), Gaps = 9/176 (5%)

Query: 36  KKAVAVAIN-GKVCDLSDPVREGSIEIITPEDPRSLAV-IRHSCAHIMAEAVQSIWPEVQ 93
           KKA  V I+ GKV   S  + +G+   +  +  R  A+   HS  H++ EA++    +  
Sbjct: 523 KKAAGVFIHFGKVE--SGMITKGAAAQLEVDHLRRSAIRANHSATHLLHEALREALGDHV 580

Query: 94  VAIGPI-IEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFES 152
              G +  +D   +DF   +  S +EL ++   +   I +++    + ++ + AR L   
Sbjct: 581 AQRGSLNADDRLRFDFSHNKALSGEELRRVAVDVNRFIRQNTVVETRIMTPDDARALGAQ 640

Query: 153 K--KEAYKVEILESIPAKENVTLYRQGEWF--DLCRGPHVRSTGQVKKFFKLMKVA 204
               E Y  E+      +      + G  +  +LC G HVR TG +  F  L   A
Sbjct: 641 ALFGEKYGDEVRVVSMGEAATGKGQDGNTYSIELCGGTHVRQTGDIGTFVILSDSA 696


>gi|126306853|ref|XP_001367377.1| PREDICTED: similar to glutamyl-prolyl tRNA synthetase isoform 2
            [Monodelphis domestica]
          Length = 1511

 Score = 41.2 bits (95), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 65/307 (21%), Positives = 115/307 (37%), Gaps = 55/307 (17%)

Query: 334  FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH- 392
             A++P +       +   ++S+R+LP+RL ++ +V R E        +R R F   + H 
Sbjct: 1115 IAVRPTSETVMYPAYAKWVQSHRDLPIRLNQWCNVVRWEFKHP-QPFLRTREFLWQEGHS 1173

Query: 393  VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
             F T E+   E L+I +L   +Y++     ++    T  EK  G D             +
Sbjct: 1174 AFATYEEAAEEVLQILDLYARVYEELLAIPVVKGRKTEKEKFAGGD---------YTTTV 1224

Query: 453  DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
            +   ++S   I        G  +   FE I +D                 P      Y N
Sbjct: 1225 EAFISASGRAIQGATSHHLGQNFSKMFEIIFEDP--------------KTPGEKQFAYQN 1270

Query: 513  SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIV--TTITSSAVE 566
            S              +G   R IG+M      N+ L L P    +Q +V    IT++  E
Sbjct: 1271 S--------------WGLTTRTIGVMTMVHGDNMGLVLPPRVACVQVVVIPCGITNALSE 1316

Query: 567  YAQEI--------ANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASE- 616
              +E            L + ++ +  D R N +  +K     +K +PI +  G ++    
Sbjct: 1317 EDREALIRKCNDYQKRLLTVNIRVRVDLRDNYSPGWKFNHWELKGVPIRLEVGPRDMKNC 1376

Query: 617  RSIGIRR 623
            + + +RR
Sbjct: 1377 QFVAVRR 1383


>gi|332296601|ref|YP_004438524.1| alanyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
 gi|332179704|gb|AEE15393.1| alanyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
          Length = 854

 Score = 41.2 bits (95), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 34/137 (24%), Positives = 61/137 (44%), Gaps = 21/137 (15%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY-YDFDKEQPFSSDELAQIEKKM 126
           R L+   H+C HI+   ++  + E     G  + D    +DF      S +++A IE+ +
Sbjct: 541 RRLSSSNHTCTHILHAVLREKFGETVKQKGSFVSDELLRFDF-FSNALSDEDIADIERSV 599

Query: 127 QEIIARDSPFLKQYLSHEKARE-----LFESK-KEAYKVEILESIPAKENVTLYRQGEWF 180
            +II  +   + Q +  E A +     LF  K K   +V  ++S+ +             
Sbjct: 600 NKIIMENFKVIVQEMDLEDAIKSGAIALFSDKYKSRVRVVSIDSVSS------------- 646

Query: 181 DLCRGPHVRSTGQVKKF 197
           +LC G HV+ TG++  F
Sbjct: 647 ELCGGTHVKMTGEIGTF 663


>gi|325294217|ref|YP_004280731.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325064665|gb|ADY72672.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 716

 Score = 41.2 bits (95), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 1/66 (1%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEII 62
           DI +  P G +K  PV +T  D A +I  S+  +  A  +NGK+  L+  ++ G  +EII
Sbjct: 387 DIYVFTPKGDLKTLPVGSTPVDFAYAIHTSIGHRCKAAKVNGKLVPLNHILQSGDKVEII 446

Query: 63  TPEDPR 68
           T  + R
Sbjct: 447 TSNEER 452


>gi|285017964|ref|YP_003375675.1| alanyl-tRNA synthetase (alanine--tRNA ligase) protein [Xanthomonas
           albilineans GPE PC73]
 gi|283473182|emb|CBA15688.1| probable alanyl-trna synthetase (alanine--trna ligase) protein
           [Xanthomonas albilineans]
          Length = 883

 Score = 41.2 bits (95), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 20/137 (14%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKM 126
           R   ++ HS  H++  A++ +        G ++  D   +DF   QP ++ ELA IE+K+
Sbjct: 564 RRATILNHSATHLLHAALREVLGTHVHQKGSLVAPDRLRFDFSHFQPIAAKELALIERKV 623

Query: 127 -QEIIARDSPFLKQYLSHEK----ARELFESKKEAYKVEILESIPAKENVTLYRQGEW-F 180
            Q++ A  +  + Q    E     A  LF  K               E V + + G++  
Sbjct: 624 NQQVRANHAVEVHQMGMQEALDFGAMALFGEKY-------------GERVRVLKMGDYST 670

Query: 181 DLCRGPHVRSTGQVKKF 197
           +LC G HV  TG +  F
Sbjct: 671 ELCGGTHVTRTGDIGLF 687


>gi|169829321|ref|YP_001699479.1| alanyl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
 gi|168993809|gb|ACA41349.1| Alanyl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
          Length = 842

 Score = 41.2 bits (95), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 36/152 (23%), Positives = 71/152 (46%), Gaps = 11/152 (7%)

Query: 56  EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPF 114
           E +++ I   D R+L +  H+  HIM  A++ +  + V  A   +  D   +DF      
Sbjct: 577 EDAVQAIVHRDDRNLIIKNHTATHIMQRALKDVLGDHVNQAGSYVGPDRLRFDFSHFGQV 636

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
           + +EL QIE+ + E +  D   + + ++ ++A+        A     L      + V + 
Sbjct: 637 TKEELQQIERIVNEKVWDDIEVVIEEMAIDQAK--------AKGAMALFGEKYGDVVRVV 688

Query: 175 RQGEW-FDLCRGPHVRSTGQVKKFFKLMKVAG 205
             G++  +LC G HV+ + ++  FFK++   G
Sbjct: 689 SIGDYSIELCGGIHVKRSSEI-GFFKIVSEGG 719


>gi|329296669|ref|ZP_08254005.1| alanyl-tRNA synthetase [Plautia stali symbiont]
          Length = 875

 Score = 41.2 bits (95), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 32/140 (22%), Positives = 60/140 (42%), Gaps = 11/140 (7%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY-YDFDKEQPFSSDELAQIEKKM 126
           RS  ++ HS  H+M EA++ +  +     G +  D +  +DF   +     ++  +E  +
Sbjct: 557 RSRIILNHSATHLMHEALRKVLGDHVGQKGSLNNDKYLRFDFSHGEAMKPQQIRAVEDIV 616

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRG 185
              I R+ P     +  E+A+ L  +     K +        + V +   GE+  +LC G
Sbjct: 617 NAQIRRNLPITTNVMDLEEAKALGATALFGEKYD--------QRVRVVSMGEYSIELCGG 668

Query: 186 PHVRSTGQVKKFFKLMKVAG 205
            H   TG +   F++   AG
Sbjct: 669 THAARTGDI-GLFRIQGEAG 687


>gi|326496549|dbj|BAJ94736.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 981

 Score = 41.2 bits (95), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 34/155 (21%), Positives = 69/155 (44%), Gaps = 22/155 (14%)

Query: 54  VREGSIEIITPEDP------RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYY 106
           +++GSIE+    D       R  A   H+  H++  A++S+        G ++  D   +
Sbjct: 633 IKQGSIEVGKKIDAAVDGKLRQGAKAHHTATHLLQSALKSVIGSETSQAGSLVAFDRLRF 692

Query: 107 DFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFES----KKEAYKVEIL 162
           DF   +P +  EL +IE  + + I+  +      ++ + A+    +    +K   +V ++
Sbjct: 693 DFSFHRPLTEKELLEIESLVNQWISDATHLETNVMALQDAKNAGATAMFGEKYGEQVRVV 752

Query: 163 ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
           E +P          G   +LC G HV +T +++ F
Sbjct: 753 E-VP----------GVSMELCGGTHVSNTAEIRGF 776


>gi|323692006|ref|ZP_08106254.1| alanine-tRNA ligase [Clostridium symbiosum WAL-14673]
 gi|323503929|gb|EGB19743.1| alanine-tRNA ligase [Clostridium symbiosum WAL-14673]
          Length = 879

 Score = 41.2 bits (95), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 35/150 (23%), Positives = 71/150 (47%), Gaps = 11/150 (7%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSS 116
           ++ +   ++ R L    HS  H++ +A++++    V+ A   + +D   +DF      + 
Sbjct: 549 TVTLKVDKENRELTERNHSATHLLHKALRTVLGTHVEQAGSLVTKDRLRFDFTHFSAMTD 608

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
           +E+A +EK + + IA   P     ++      L E+KK        E     ++V + + 
Sbjct: 609 EEIAAVEKLVNDEIAAALPVETMVMT------LDEAKKTGAMALFGEKYG--DSVRVVKM 660

Query: 177 GEW-FDLCRGPHVRSTGQVKKFFKLMKVAG 205
           G++  +LC G HV +T  +   FK++  AG
Sbjct: 661 GDFSTELCGGTHVDNTSSISA-FKIVSEAG 689


>gi|307720827|ref|YP_003891967.1| prolyl-tRNA synthetase [Sulfurimonas autotrophica DSM 16294]
 gi|306978920|gb|ADN08955.1| prolyl-tRNA synthetase [Sulfurimonas autotrophica DSM 16294]
          Length = 568

 Score = 41.2 bits (95), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 27/103 (26%), Positives = 45/103 (43%), Gaps = 6/103 (5%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           +E+    V    LWQ+SG  + +   +       + +     F L P +    V V  + 
Sbjct: 67  QEVELSFVTPAELWQESGRIEKFGKELLRFHDRKNNL-----FVLGPTHEEMMVDVVRNR 121

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           + SY+ LP+ L +  + +R+E      GLMR R F   D + F
Sbjct: 122 VTSYKNLPLNLYQIKTKFRDEARPRF-GLMRGREFIMKDGYSF 163


>gi|229083329|ref|ZP_04215689.1| Seryl-tRNA synthetase [Bacillus cereus Rock3-44]
 gi|228699976|gb|EEL52601.1| Seryl-tRNA synthetase [Bacillus cereus Rock3-44]
          Length = 424

 Score = 41.2 bits (95), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 34/153 (22%), Positives = 65/153 (42%), Gaps = 13/153 (8%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMR--RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMF 319
           GS  +F    G K+ + LIS+M      + +YEE+  P ++++     +G    +  + F
Sbjct: 160 GSRFVFSKGAGAKLERALISFMLDLHTEEHEYEEVLPPYMVNRASMTGTGQLPKFEEDAF 219

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS--- 376
            ++  D        + L P        +    + +  +LP+R A F + +R+E   +   
Sbjct: 220 RIESED--------YFLIPTAEVPVTNMHRDEILNVDQLPIRYAAFSACFRSEAGSAGRD 271

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
             GL+R   F + +   F   E  + E  K+ N
Sbjct: 272 TRGLIRQHQFNKVELVKFVKPEDSYEELEKLTN 304


>gi|254369401|ref|ZP_04985413.1| alanyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FSC022]
 gi|157122351|gb|EDO66491.1| alanyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FSC022]
          Length = 865

 Score = 41.2 bits (95), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 33/133 (24%), Positives = 57/133 (42%), Gaps = 10/133 (7%)

Query: 67  PRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFSSDELAQIEKK 125
           PR      HS  H++ +A++ +        G ++ E+   +DF  ++  S  E+ QIE  
Sbjct: 546 PRLATAANHSATHLLYKALKLVLGGHAEQKGSLVDENRLRFDFTHDKAISRSEIEQIELL 605

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCR 184
           + + I  + P      S +KA+ L          E L      + V +   G++  +LC 
Sbjct: 606 VNQQIRANYPVTTIETSQQKAKSL--------GAEALFGEKYGDIVRVISMGDFSIELCG 657

Query: 185 GPHVRSTGQVKKF 197
           G HV  TG +  F
Sbjct: 658 GTHVAYTGDIGLF 670


>gi|224105089|ref|XP_002313683.1| predicted protein [Populus trichocarpa]
 gi|313471500|sp|B9HQZ6|SYAP_POPTR RecName: Full=Probable alanyl-tRNA synthetase, chloroplastic;
           AltName: Full=Alanine--tRNA ligase; Short=AlaRS
 gi|222850091|gb|EEE87638.1| predicted protein [Populus trichocarpa]
          Length = 994

 Score = 41.2 bits (95), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 35/156 (22%), Positives = 68/156 (43%), Gaps = 24/156 (15%)

Query: 54  VREGSIEI------ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYY 106
           +REG +E+            R  A + H+  H++  A++ +  +     G ++  D   +
Sbjct: 645 IREGVLEVGREVEAAVDAKLRQRAKVHHTATHLLQSALKKVIGQETSQAGSLVAFDRLRF 704

Query: 107 DFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEI 161
           DF+  +P    EL +IE  +   I   +    + +S   A+E     +F  +K   +V +
Sbjct: 705 DFNFHRPLHDSELEEIENLINGWIGDGTLLQTKVMSLTDAKEAGAIAMF-GEKYGEQVRV 763

Query: 162 LESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
           +E +P          G   +LC G HV +T +++ F
Sbjct: 764 VE-VP----------GVSMELCGGTHVSNTSEIRAF 788


>gi|198276957|ref|ZP_03209488.1| hypothetical protein BACPLE_03162 [Bacteroides plebeius DSM 17135]
 gi|198270482|gb|EDY94752.1| hypothetical protein BACPLE_03162 [Bacteroides plebeius DSM 17135]
          Length = 872

 Score = 41.2 bits (95), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 60/134 (44%), Gaps = 16/134 (11%)

Query: 66  DPRSLAVIRHSCAHIMAEAV-QSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D R+     HSC H++ EA+ Q +   V+     +  +   +DF   Q  + +++ ++E 
Sbjct: 554 DKRAACAANHSCTHLLDEALRQVLGTHVEQKGSLVTPESLRFDFSHFQKVTPEQIREVEH 613

Query: 125 KMQEIIARDSPFLKQY--LSHEKARELFESK--KEAYKVEILESIPAKENVTLYRQGEWF 180
            +   I  + P L +Y  L  EKA+EL       E Y  E          V + + G   
Sbjct: 614 LVNAKIRENVP-LTEYRNLPIEKAKELGAIALFGEKYGDE----------VRVVQFGSSI 662

Query: 181 DLCRGPHVRSTGQV 194
           + C G HV +TG++
Sbjct: 663 EFCGGTHVSATGKI 676


>gi|163802982|ref|ZP_02196869.1| alanyl-tRNA synthetase [Vibrio sp. AND4]
 gi|159173272|gb|EDP58100.1| alanyl-tRNA synthetase [Vibrio sp. AND4]
          Length = 865

 Score = 41.2 bits (95), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 34/154 (22%), Positives = 67/154 (43%), Gaps = 11/154 (7%)

Query: 54  VREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQ 112
            ++  +  I   + R+   + HS  H++  A++ +  E     G +++ DG  +DF   +
Sbjct: 547 AKDDEVATIVDAERRAAISLNHSATHLLHAALRQLLGEHVTQKGSLVKADGLRFDFSHLE 606

Query: 113 PFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVT 172
             ++ EL ++E+ +   + R+       +  E A+     KK A     L      + V 
Sbjct: 607 AVTAAELKEVERLVNAQVRRNHTIETNVMDIESAK-----KKGAMA---LFGEKYDDEVR 658

Query: 173 LYRQGEW-FDLCRGPHVRSTGQVKKFFKLMKVAG 205
           +   G++  +LC G H  STG +   FK+    G
Sbjct: 659 VLSMGDFSTELCGGIHASSTGDI-GLFKITSEGG 691


>gi|89256431|ref|YP_513793.1| alanyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           LVS]
 gi|115314869|ref|YP_763592.1| alanyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           OSU18]
 gi|156502533|ref|YP_001428598.1| alanyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FTNF002-00]
 gi|167010686|ref|ZP_02275617.1| alanyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FSC200]
 gi|254367771|ref|ZP_04983792.1| alanyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           257]
 gi|122325116|sp|Q0BLS9|SYA_FRATO RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|122500687|sp|Q2A3A9|SYA_FRATH RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|205830095|sp|A7NCD9|SYA_FRATF RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|89144262|emb|CAJ79545.1| Alanyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           LVS]
 gi|115129768|gb|ABI82955.1| alanine--tRNA ligase [Francisella tularensis subsp. holarctica
           OSU18]
 gi|134253582|gb|EBA52676.1| alanyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           257]
 gi|156253136|gb|ABU61642.1| alanyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FTNF002-00]
          Length = 865

 Score = 41.2 bits (95), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 33/133 (24%), Positives = 57/133 (42%), Gaps = 10/133 (7%)

Query: 67  PRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFSSDELAQIEKK 125
           PR      HS  H++ +A++ +        G ++ E+   +DF  ++  S  E+ QIE  
Sbjct: 546 PRLATAANHSATHLLYKALKLVLGGHAEQKGSLVDENRLRFDFTHDKAISRSEIEQIELL 605

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCR 184
           + + I  + P      S +KA+ L          E L      + V +   G++  +LC 
Sbjct: 606 VNQQIRANYPVTTIETSQQKAKSL--------GAEALFGEKYGDIVRVISMGDFSIELCG 657

Query: 185 GPHVRSTGQVKKF 197
           G HV  TG +  F
Sbjct: 658 GTHVAYTGDIGLF 670


>gi|319794254|ref|YP_004155894.1| alanyL-tRNA synthetase [Variovorax paradoxus EPS]
 gi|315596717|gb|ADU37783.1| alanyl-tRNA synthetase [Variovorax paradoxus EPS]
          Length = 874

 Score = 41.2 bits (95), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 31/139 (22%), Positives = 63/139 (45%), Gaps = 10/139 (7%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKM 126
           R+  +  HS  H+M +A++ +  +     G +++ D   +DF    P + D++ +IEK++
Sbjct: 557 RNATMRNHSVTHLMHKALREVLGDHVQQKGSLVDADKTRFDFAHNAPVTRDQILEIEKRV 616

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGP 186
                 ++  L    +  +  ++  ++K    +   E     E V +   G   +LC G 
Sbjct: 617 ------NAEILSNVATQARVMDMESAQKTGAMMLFGEKY--GETVRVLDIGSSRELCGGT 668

Query: 187 HVRSTGQVKKFFKLMKVAG 205
           HV  TG +   FK++   G
Sbjct: 669 HVGRTGDI-GLFKIVSEGG 686


>gi|24656200|ref|NP_647737.1| Prolyl-tRNA synthetase [Drosophila melanogaster]
 gi|7292265|gb|AAF47674.1| Prolyl-tRNA synthetase [Drosophila melanogaster]
          Length = 458

 Score = 41.2 bits (95), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 40/166 (24%), Positives = 71/166 (42%), Gaps = 12/166 (7%)

Query: 247 RKLAREMDLFHIAEDGSGVIF--WHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHL 304
           +KL  E+ L     +G+  I     R   K    + S M++      ++I  P +    L
Sbjct: 30  QKLLTELGLVKSGSNGTYQIMPMAQRSVDKCIDLVQSNMQQA---GGQKITLPILTPTGL 86

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF-NHGLKSYRELPVRLA 363
           W+++G  D   +  + V+      +  + F + P +     A+       SYR+LP+RL 
Sbjct: 87  WKKTGRLDGDISEFYMVR-----DRSGKQFLMSPTHEEAVTAMLATTSPISYRQLPLRLF 141

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
           + G  +R+E   +  GLMR + F   D + F   E+   E   + N
Sbjct: 142 QIGPKFRDELK-TRFGLMRAKEFLMKDMYSFDVSEETAMETYTLVN 186


>gi|228471913|ref|ZP_04056683.1| alanine--tRNA ligase [Capnocytophaga gingivalis ATCC 33624]
 gi|228276765|gb|EEK15471.1| alanine--tRNA ligase [Capnocytophaga gingivalis ATCC 33624]
          Length = 877

 Score = 41.2 bits (95), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 55/243 (22%), Positives = 104/243 (42%), Gaps = 43/243 (17%)

Query: 42  AINGKVCDLSDPVREGSIEIITPE-------DP---------RSLAVIRHSCAHIMAEAV 85
           A NG++  ++D  +E ++ I   E       DP         R+LA   HS  H++ +A+
Sbjct: 520 AANGELIYITDTKKENNLIIHIAEHLPENLNDPFKAEVHPMGRALAQSNHSATHLLHQAL 579

Query: 86  QSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHE 144
           + +    V+     +  +   +DF      + +EL ++E+ + + I    P        E
Sbjct: 580 REVLGTHVEQKGSHVSPEALRFDFSHFAKLTPEELTEVERLVNKRIYEKIPL-------E 632

Query: 145 KAREL-FESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMK- 202
           + R +  +   EA  + +       E V + + GE  +LC G HV++TG +  FFK++  
Sbjct: 633 EHRNIPIQQALEAGAMALFGE-KYGEKVRMIQFGESRELCGGTHVKNTGDI-WFFKIVSE 690

Query: 203 --VAGAYWRGDS------------NRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRK 248
             VA    R ++               +L  I G+  N Q  + + +  L+E   R H++
Sbjct: 691 GAVAAGVRRIEAITNAGALKHFLLQEKLLEEIKGSLKNPQDPI-KSITNLQEENARLHKE 749

Query: 249 LAR 251
           L +
Sbjct: 750 LEQ 752


>gi|220918948|ref|YP_002494252.1| cyclic nucleotide-binding protein [Anaeromyxobacter dehalogenans
           2CP-1]
 gi|219956802|gb|ACL67186.1| cyclic nucleotide-binding protein [Anaeromyxobacter dehalogenans
           2CP-1]
          Length = 715

 Score = 41.2 bits (95), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 43/178 (24%), Positives = 78/178 (43%), Gaps = 8/178 (4%)

Query: 22  TGSDVAESISRSLAKKAVAVAING-KVCDLSDPV-REGSIEIITPEDPRSLAVIRHSCAH 79
           TG+ V + +  ++    V   + G K   L+ PV  + ++  +T        V  HS   
Sbjct: 176 TGTRVRDLLPEAIEGDLVVAGLLGQKPVSLATPVFTDTTVAPLTVSHWEGRQVYAHSLGL 235

Query: 80  IMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK---MQEIIARDSPF 136
           ++ EA   + P ++V +GP +  G       E     D  A   +    M+ I+A D+PF
Sbjct: 236 VLLEAAHQVAPALRVRMGPSL--GVRQLVVVEGAGGEDRAALAARLAAGMERIVAADAPF 293

Query: 137 LKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQV 194
             +Y S ++A+  F  +  +    +L  +  +  V L   G+ + L  GP + STG +
Sbjct: 294 RSEYWSTDEAQGWFLERGWSDAARLLR-VRRQATVRLVSCGDVYALSMGPLLPSTGAL 350


>gi|262048613|ref|ZP_06021496.1| alanyl-tRNA synthetase [Staphylococcus aureus D30]
 gi|259163260|gb|EEW47819.1| alanyl-tRNA synthetase [Staphylococcus aureus D30]
          Length = 876

 Score = 41.2 bits (95), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 33/137 (24%), Positives = 63/137 (45%), Gaps = 17/137 (12%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++  A++S+  +     G ++E D   +DF    P ++DE+ Q+E+ + E I + 
Sbjct: 565 HSATHLLHAALKSVLGDHVNQAGSLVEADRLRFDFSHFGPMTNDEIDQVERLVNEEIWKG 624

Query: 134 SPFLKQYLSHEKAREL----FESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
                Q +    A+E+       +K +  V ++   P              +LC G HVR
Sbjct: 625 IDVNIQEMDIASAKEMGAMALFGEKYSDVVRVVNMAPFS-----------IELCGGIHVR 673

Query: 190 STGQVKKFFKLMKVAGA 206
           +T ++   FK++  +G 
Sbjct: 674 NTSEI-GLFKIVSESGT 689


>gi|229829763|ref|ZP_04455832.1| hypothetical protein GCWU000342_01860 [Shuttleworthia satelles DSM
           14600]
 gi|229791752|gb|EEP27866.1| hypothetical protein GCWU000342_01860 [Shuttleworthia satelles DSM
           14600]
          Length = 479

 Score = 41.2 bits (95), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 37/161 (22%), Positives = 75/161 (46%), Gaps = 14/161 (8%)

Query: 474 FYGPKFEYILKDAI--GRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV-MIHRAVFGS 530
           F G +  Y ++  +  G+  Q GT     N    F   Y   +++K + +  +H+  +G 
Sbjct: 209 FAGAEATYTIETLMHDGKALQSGT---SHNFGDGFARAYGIQYTDKNNQLRYVHQTSWGV 265

Query: 531 IERFIGIMI----ENFKGNLPLWLSPIQAIVTTITS---SAVEYAQEIANLLKSHHLSIE 583
             R IG +I    ++    LP  ++P+Q ++  +       +E A+E+   L+    S++
Sbjct: 266 STRLIGAIIMVHGDDSGLVLPPRIAPVQIVIVPVMQQKEGVLEKAEELRQQLQKAGFSVK 325

Query: 584 TDFRNETINYKIREHSIKKIPIIIICGDKE-ASERSIGIRR 623
            D   ++  +K  E  ++ IP+ I  G K+   E+ + +RR
Sbjct: 326 LDDSEKSPGWKFAEAEMRGIPLRIEVGPKDIEKEQVVMVRR 366


>gi|332140622|ref|YP_004426360.1| alanyl-tRNA synthetase [Alteromonas macleodii str. 'Deep ecotype']
 gi|327550644|gb|AEA97362.1| alanyl-tRNA synthetase [Alteromonas macleodii str. 'Deep ecotype']
          Length = 865

 Score = 41.2 bits (95), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 33/133 (24%), Positives = 60/133 (45%), Gaps = 11/133 (8%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIED-GFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++  A++ I  E     G ++E     +DF   +  ++++LA+IE+++ + I  +
Sbjct: 554 HSATHLLHAALREILGEHVTQKGSLVEAPRMRFDFSHFEAVTTEQLAEIERRVNQEIRAN 613

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTG 192
                + +  E+A+        A     L      E V +   G +  +LC G HV  TG
Sbjct: 614 HSLATELMDLEEAK--------ASGAMALFGEKYDEKVRVVTMGPFSVELCGGTHVARTG 665

Query: 193 QVKKFFKLMKVAG 205
            +   FK+   AG
Sbjct: 666 DI-GLFKITSEAG 677


>gi|238925277|ref|YP_002938794.1| (p)ppGpp synthetase I, SpoT/RelA [Eubacterium rectale ATCC 33656]
 gi|238876953|gb|ACR76660.1| (p)ppGpp synthetase I, SpoT/RelA [Eubacterium rectale ATCC 33656]
          Length = 786

 Score = 41.2 bits (95), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 1/60 (1%)

Query: 10  PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPR 68
           P G +KN P  +T  D A SI  ++  K V   +NGK+  +   ++ G  IEIIT ++ +
Sbjct: 445 PSGDVKNLPKGSTPIDFAYSIHSAVGNKMVGAKVNGKLVPIDYVIKNGDQIEIITSQNSK 504


>gi|153835573|ref|ZP_01988240.1| alanyl-tRNA synthetase [Vibrio harveyi HY01]
 gi|148867838|gb|EDL67069.1| alanyl-tRNA synthetase [Vibrio harveyi HY01]
          Length = 860

 Score = 40.8 bits (94), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 35/149 (23%), Positives = 65/149 (43%), Gaps = 11/149 (7%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSD 117
           +  I   + R+   + HS  H++  A++ +  E     G +++ DG  +DF   +  ++ 
Sbjct: 547 VATIVDAERRAAISLNHSATHLLHAALRQLLGEHVTQKGSLVKADGLRFDFSHLEAVTAA 606

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           EL ++E+ +   I R+       +  E A+     KK A     L      + V +   G
Sbjct: 607 ELKEVERLVNAQIRRNHVIETNVMDIESAK-----KKGAMA---LFGEKYDDEVRVLSMG 658

Query: 178 EW-FDLCRGPHVRSTGQVKKFFKLMKVAG 205
           ++  +LC G H  STG +   FK+    G
Sbjct: 659 DFSTELCGGIHASSTGDI-GLFKITSEGG 686


>gi|126698136|ref|YP_001087033.1| putative phosphoribulokinase/uridine kinase [Clostridium difficile
           630]
 gi|255099663|ref|ZP_05328640.1| putative phosphoribulokinase/uridine kinase [Clostridium difficile
           QCD-63q42]
 gi|255305546|ref|ZP_05349718.1| putative phosphoribulokinase/uridine kinase [Clostridium difficile
           ATCC 43255]
 gi|115249573|emb|CAJ67390.1| putative uridine kinase [Clostridium difficile]
          Length = 555

 Score = 40.8 bits (94), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 41/193 (21%), Positives = 82/193 (42%), Gaps = 14/193 (7%)

Query: 78  AHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFL 137
           + I   A + I+ + +V I   + DG Y +   ++     ++  I+ KM+EI+  D    
Sbjct: 82  SFIFVMACREIFWDSRVTIEHSLSDGLYCEVHIDRKLKEADVENIKNKMKEIVNNDYVIE 141

Query: 138 KQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
           K  ++  +A  +FE+ +   K E+L+     ++  +Y+   + D   G  + STG +K F
Sbjct: 142 KIEVTRNEAISIFENNEMYEKAELLK-YKEYDSAKVYKCRNYIDHFYGYMLPSTGYIKSF 200

Query: 198 FKLMKVAGAYWRGDSN-----------RPMLSRIYGTA--WNTQQELTQYLYFLEESEKR 244
              +   G    G S            +P LS +Y  A  W+    + + +   +  E  
Sbjct: 201 DIKLYNGGVIILGPSEEDKTLPMKFVPQPKLSSVYYEAEEWSRLMGIDKVVSLNKIIENN 260

Query: 245 DHRKLAREMDLFH 257
           ++  + R  +  H
Sbjct: 261 EYGDIIRTFEALH 273


>gi|270307496|ref|YP_003329554.1| alanyl-tRNA synthetase [Dehalococcoides sp. VS]
 gi|270153388|gb|ACZ61226.1| alanyl-tRNA synthetase [Dehalococcoides sp. VS]
          Length = 876

 Score = 40.8 bits (94), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 53/216 (24%), Positives = 94/216 (43%), Gaps = 23/216 (10%)

Query: 44  NGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIED 102
            G+V      + E +   I  E  R +A   H+  HI+  A++ +  E VQ     +  +
Sbjct: 536 QGRVISGCLKISESAAAHIDEERRRDIAR-NHTATHILQTALRQVLGEQVQQRGSVVTPE 594

Query: 103 GFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAY 157
              +DF   +P + DE+ + E+ + + I R+ P   + + +  A E     LF  +K   
Sbjct: 595 RLRFDFSHLRPMTKDEIRRAEEFVNDKIRRNLPVYAEEMPYRHALEEGVTALF-GEKYGD 653

Query: 158 KVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVA--GAYWRGDSNRP 215
           +V +L          + R     +LC G HV ++G++   FK++  +  GA  R      
Sbjct: 654 RVRVLR---------VGRPAVSAELCGGTHVSASGEI-SLFKIVSESSVGAGLR--RIEA 701

Query: 216 MLSRIYGTAWNTQQE-LTQYLYFLEESEKRDHRKLA 250
           +  R      N QQ+ L++    LE + +   RKLA
Sbjct: 702 VTGREAEAYINLQQDSLSELSGMLEAAPEESLRKLA 737


>gi|139473237|ref|YP_001127952.1| seryl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
 gi|166223299|sp|A2RCY1|SYS_STRPG RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|134271483|emb|CAM29704.1| seryl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
          Length = 425

 Score = 40.8 bits (94), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 36/172 (20%), Positives = 73/172 (42%), Gaps = 12/172 (6%)

Query: 262 GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           G+  +F+   G ++ + L ++M    IK+ Y+EI TP +++      +G +  ++ + F 
Sbjct: 160 GARFLFYKNLGARLERALYNFMLDEHIKEGYQEIITPYMVNHDSMFGTGQYPKFKEDTFE 219

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---L 377
           +    DT      F L P         +   +   +ELP+        +R+E   +    
Sbjct: 220 LA---DT-----NFVLIPTAEVPLTNYYRGEILDGKELPIYFTAMSPSFRSEAGSAGRDT 271

Query: 378 HGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
            GL+R+  F + +   F   E+ + E  K+     +I +  G    ++ L T
Sbjct: 272 RGLIRLHQFHKVEMVKFAKSEESYQELEKMTANAENILQKLGLPYRVISLCT 323


>gi|126306851|ref|XP_001367334.1| PREDICTED: similar to glutamyl-prolyl tRNA synthetase isoform 1
            [Monodelphis domestica]
          Length = 1591

 Score = 40.8 bits (94), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 65/307 (21%), Positives = 115/307 (37%), Gaps = 55/307 (17%)

Query: 334  FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH- 392
             A++P +       +   ++S+R+LP+RL ++ +V R E        +R R F   + H 
Sbjct: 1195 IAVRPTSETVMYPAYAKWVQSHRDLPIRLNQWCNVVRWEFKHP-QPFLRTREFLWQEGHS 1253

Query: 393  VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
             F T E+   E L+I +L   +Y++     ++    T  EK  G D             +
Sbjct: 1254 AFATYEEAAEEVLQILDLYARVYEELLAIPVVKGRKTEKEKFAGGD---------YTTTV 1304

Query: 453  DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
            +   ++S   I        G  +   FE I +D                 P      Y N
Sbjct: 1305 EAFISASGRAIQGATSHHLGQNFSKMFEIIFEDP--------------KTPGEKQFAYQN 1350

Query: 513  SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIV--TTITSSAVE 566
            S              +G   R IG+M      N+ L L P    +Q +V    IT++  E
Sbjct: 1351 S--------------WGLTTRTIGVMTMVHGDNMGLVLPPRVACVQVVVIPCGITNALSE 1396

Query: 567  YAQEI--------ANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASE- 616
              +E            L + ++ +  D R N +  +K     +K +PI +  G ++    
Sbjct: 1397 EDREALIRKCNDYQKRLLTVNIRVRVDLRDNYSPGWKFNHWELKGVPIRLEVGPRDMKNC 1456

Query: 617  RSIGIRR 623
            + + +RR
Sbjct: 1457 QFVAVRR 1463


>gi|254974157|ref|ZP_05270629.1| putative phosphoribulokinase/uridine kinase [Clostridium difficile
           QCD-66c26]
 gi|255091558|ref|ZP_05321036.1| putative phosphoribulokinase/uridine kinase [Clostridium difficile
           CIP 107932]
 gi|255313284|ref|ZP_05354867.1| putative phosphoribulokinase/uridine kinase [Clostridium difficile
           QCD-76w55]
 gi|255515975|ref|ZP_05383651.1| putative phosphoribulokinase/uridine kinase [Clostridium difficile
           QCD-97b34]
 gi|255649066|ref|ZP_05395968.1| putative phosphoribulokinase/uridine kinase [Clostridium difficile
           QCD-37x79]
 gi|260682257|ref|YP_003213542.1| putative phosphoribulokinase/uridine kinase [Clostridium difficile
           CD196]
 gi|260685856|ref|YP_003216989.1| putative phosphoribulokinase/uridine kinase [Clostridium difficile
           R20291]
 gi|306519180|ref|ZP_07405527.1| putative phosphoribulokinase/uridine kinase [Clostridium difficile
           QCD-32g58]
 gi|260208420|emb|CBA60968.1| putative phosphoribulokinase/uridine kinase [Clostridium difficile
           CD196]
 gi|260211872|emb|CBE02305.1| putative phosphoribulokinase/uridine kinase [Clostridium difficile
           R20291]
          Length = 555

 Score = 40.8 bits (94), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 41/193 (21%), Positives = 82/193 (42%), Gaps = 14/193 (7%)

Query: 78  AHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFL 137
           + I   A + I+ + +V I   + DG Y +   ++     ++  I+ KM+EI+  D    
Sbjct: 82  SFIFVMACREIFWDSRVTIEHSLSDGLYCEVHIDRKLKEADVENIKNKMKEIVNNDYVIE 141

Query: 138 KQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
           K  ++  +A  +FE+ +   K E+L+     ++  +Y+   + D   G  + STG +K F
Sbjct: 142 KIEVTRNEAISIFENNEMYEKAELLK-YKEYDSAKVYKCRNYIDHFYGYMLPSTGYIKSF 200

Query: 198 FKLMKVAGAYWRGDSN-----------RPMLSRIYGTA--WNTQQELTQYLYFLEESEKR 244
              +   G    G S            +P LS +Y  A  W+    + + +   +  E  
Sbjct: 201 DIKLYNGGVIILGPSEEDKTLPMKFVPQPKLSSVYYEAEEWSRLMGIDKVVSLNKIIENN 260

Query: 245 DHRKLAREMDLFH 257
           ++  + R  +  H
Sbjct: 261 EYGDIIRTFEALH 273


>gi|332703203|ref|ZP_08423291.1| alanyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay]
 gi|332553352|gb|EGJ50396.1| alanyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay]
          Length = 879

 Score = 40.8 bits (94), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 30/134 (22%), Positives = 58/134 (43%), Gaps = 8/134 (5%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFSSDELAQIEKKM 126
           R+     H+  H++  A++ +  +     G ++  D   +DF      + +EL  +E ++
Sbjct: 562 RAATARNHTTTHLLQAALRKVLGDHVKQSGSLVGPDRLRFDFTHISALTPEELRAVEDEV 621

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGP 186
              I    P  ++YLS ++A  L +     +  +  E++       +   G   +LC G 
Sbjct: 622 NRAIVASLPVSREYLSQQQA--LAKGATALFGEKYGETV-----CVIEVPGVSMELCGGT 674

Query: 187 HVRSTGQVKKFFKL 200
           H+ STGQ   F  L
Sbjct: 675 HLASTGQAGLFVIL 688


>gi|330995755|ref|ZP_08319652.1| threonine/alanine tRNA ligase second additional domain protein
           [Paraprevotella xylaniphila YIT 11841]
 gi|329574485|gb|EGG56050.1| threonine/alanine tRNA ligase second additional domain protein
           [Paraprevotella xylaniphila YIT 11841]
          Length = 160

 Score = 40.8 bits (94), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 30/127 (23%), Positives = 60/127 (47%), Gaps = 15/127 (11%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDS 134
           H+C HI+ + +  ++   +     I       ++D     + +++A+I +K+ E+IA D 
Sbjct: 21  HTCEHILNQTMVRMFGCERSGNAHIERKKSKINYDLADEPTEEQVAEIARKVNEVIAADL 80

Query: 135 PFLKQYLSHEKARELFESKKEAYKVEILESIP--AKENVTLYRQGEWFDLCR--GPHVRS 190
           P    Y+S +   +             L+ +P  A++ + L R G+ +D+C   G HV  
Sbjct: 81  PVTYAYVSRDAVPDNVP----------LDKLPDAAEDTLRLVRVGD-YDVCACIGAHVEH 129

Query: 191 TGQVKKF 197
           T Q+ +F
Sbjct: 130 TAQIGRF 136


>gi|298372626|ref|ZP_06982616.1| alanine--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058]
 gi|298275530|gb|EFI17081.1| alanine--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058]
          Length = 867

 Score = 40.8 bits (94), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 33/127 (25%), Positives = 55/127 (43%), Gaps = 9/127 (7%)

Query: 70  LAVIR-HSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQ 127
           LA  R H+  HI+ EA++ +  + V+     +  D   +DF   Q  + DE+ ++E    
Sbjct: 555 LATARNHTATHILHEALREVLGKHVEQKGSYVCADNLRFDFSHFQKMTDDEIRRVETIAN 614

Query: 128 EIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPH 187
             I  + P        E+ R+L  ++  A     L      E V + + G   +LC G H
Sbjct: 615 RRIRDNYPL-------EEMRQLPIAEARAMGAIALFGEKYGETVRVVKFGSSVELCGGTH 667

Query: 188 VRSTGQV 194
           V  TG +
Sbjct: 668 VSRTGDI 674


>gi|260587849|ref|ZP_05853762.1| alanine--tRNA ligase [Blautia hansenii DSM 20583]
 gi|260542114|gb|EEX22683.1| alanine--tRNA ligase [Blautia hansenii DSM 20583]
          Length = 892

 Score = 40.8 bits (94), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 33/127 (25%), Positives = 60/127 (47%), Gaps = 14/127 (11%)

Query: 75  HSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++ +A++++    V+     +  D   +DF   Q  +++ELA +E+ + + I   
Sbjct: 579 HSATHLLQKALKTVLGSHVEQKGSLVTPDRLRFDFAHFQSMTAEELAAVEEIVNKEIQAA 638

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAK--ENVTLYRQGEWF-DLCRGPHVRS 190
            P + + +S E          EA KV  +     K  E V +   G++  +LC G HV +
Sbjct: 639 LPVVTEVMSIE----------EAKKVGAMALFGEKYGEEVRVVSMGDFSKELCGGTHVSN 688

Query: 191 TGQVKKF 197
           TG +  F
Sbjct: 689 TGVITTF 695


>gi|156975767|ref|YP_001446674.1| alanyl-tRNA synthetase [Vibrio harveyi ATCC BAA-1116]
 gi|205830285|sp|A7MYT5|SYA_VIBHB RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|156527361|gb|ABU72447.1| hypothetical protein VIBHAR_03511 [Vibrio harveyi ATCC BAA-1116]
          Length = 865

 Score = 40.8 bits (94), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 35/149 (23%), Positives = 65/149 (43%), Gaps = 11/149 (7%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSD 117
           +  I   + R+   + HS  H++  A++ +  E     G +++ DG  +DF   +  ++ 
Sbjct: 552 VATIVDAERRAAISLNHSATHLLHAALRQLLGEHVTQKGSLVKADGLRFDFSHLEAVTAA 611

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           EL ++E+ +   I R+       +  E A+     KK A     L      + V +   G
Sbjct: 612 ELKEVERLVNAQIRRNHVIETNVMDIESAK-----KKGAMA---LFGEKYDDEVRVLSMG 663

Query: 178 EW-FDLCRGPHVRSTGQVKKFFKLMKVAG 205
           ++  +LC G H  STG +   FK+    G
Sbjct: 664 DFSTELCGGIHASSTGDI-GLFKITSEGG 691


>gi|194900998|ref|XP_001980042.1| GG16916 [Drosophila erecta]
 gi|190651745|gb|EDV49000.1| GG16916 [Drosophila erecta]
          Length = 416

 Score = 40.8 bits (94), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 52/233 (22%), Positives = 101/233 (43%), Gaps = 23/233 (9%)

Query: 229 QELTQYLY--FLEESEKRDHRKLAREMDLFHIAEDG--SGVIFWHRKGW--KIFQTLISY 282
           +EL QY++     +S  ++  +LAR ++L+ +   G  +G   ++  G    + Q +I Y
Sbjct: 100 RELAQYVHRELPPQSTLKEFSELARALNLYRMDHLGNYTGHKSYYLTGQLATLEQAIIQY 159

Query: 283 MRRKIKD-DYEEINTPQVLDQHLWQQSG-HWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
             + + D  ++ I+ P +L + + +  G   +  R  ++ +   +  +      AL    
Sbjct: 160 ALQAVTDHGFKLISVPDILPKEVIESCGMRTEGERTQVYKLDTGE-CLSGTSEMAL---- 214

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG--SLHGLMRVRGFTQDDAHVFCTKE 398
                  F + L S  +LP+++      YR E SG     G+ RV  F + +    CT+E
Sbjct: 215 ----AGFFANKLLSEEQLPLKVTAVSRCYRAETSGLQEEKGIYRVHQFNKVEMFAICTEE 270

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWD-DAENIMKG 450
           Q   E  +  N+ + +++  G      +L   P   +G+ A    D E  M G
Sbjct: 271 QSEAELEEFKNIEVDLFRRLGLN---FRLLDMPPCELGAPAYQKYDIEAWMPG 320


>gi|332882439|ref|ZP_08450064.1| alanine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str. F0087]
 gi|332679609|gb|EGJ52581.1| alanine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str. F0087]
          Length = 871

 Score = 40.8 bits (94), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 30/131 (22%), Positives = 61/131 (46%), Gaps = 10/131 (7%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY-YDFDKEQPFSSDELAQIEK 124
           D R+ +   H+C H++ +A++++  E     G ++   +  +DF   Q  + ++L ++E+
Sbjct: 553 DLRAASEANHTCTHLLDQALRTVLGEHVEQKGSLVTPEYLRFDFSHFQKVTDEQLREVER 612

Query: 125 KMQEIIARDSPFLKQY-LSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +   I  D P      +  EKA+EL        K          + V + + G+  + C
Sbjct: 613 IVNAKIREDLPLQDHRDMPIEKAKELGAIALFGEKY--------GDRVRVVQFGDSVEFC 664

Query: 184 RGPHVRSTGQV 194
            G H +STG++
Sbjct: 665 GGCHAKSTGRI 675


>gi|217979627|ref|YP_002363774.1| alanyl-tRNA synthetase [Methylocella silvestris BL2]
 gi|217505003|gb|ACK52412.1| alanyl-tRNA synthetase [Methylocella silvestris BL2]
          Length = 895

 Score = 40.8 bits (94), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 46/218 (21%), Positives = 94/218 (43%), Gaps = 25/218 (11%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFSS 116
           ++E+      RS     HS  H++ E+++ +  +     G ++ +D   +DF   +P S 
Sbjct: 547 ALELSVDHARRSAIRANHSATHLLHESLRLVLGDHVAQKGSLVADDRLRFDFTHLKPISP 606

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEK-----ARELFESK-KEAYKVEILESIPAKEN 170
           +EL ++E      +  ++P + + ++ ++     AR LF  K  +  +V  +     +E+
Sbjct: 607 EELTRVEDIANRAVTDNAPVVTRLMAVDEAIASGARALFGEKYGDEVRVVTMGYAQDRED 666

Query: 171 VTLYRQGEWF--DLCRGPHVRSTGQVK--KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWN 226
                    F  +LC G HV  TG +          VA    R ++     +R +    N
Sbjct: 667 SGDGGANRAFSVELCGGTHVARTGDIGLIAITSESAVAAGVRRIEAKTAAAARRH---LN 723

Query: 227 TQQELTQYLYFL-----EESEKR------DHRKLAREM 253
            + +  +++  L     +++EKR      + RKL RE+
Sbjct: 724 ARSDKLEHIAVLLKSSEDDAEKRLAALLEERRKLDREL 761


>gi|154483551|ref|ZP_02025999.1| hypothetical protein EUBVEN_01255 [Eubacterium ventriosum ATCC
           27560]
 gi|149735461|gb|EDM51347.1| hypothetical protein EUBVEN_01255 [Eubacterium ventriosum ATCC
           27560]
          Length = 886

 Score = 40.8 bits (94), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 32/130 (24%), Positives = 60/130 (46%), Gaps = 20/130 (15%)

Query: 75  HSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++ +A++++  E V+ A   +  D   +DF   Q  + +E+ ++E  + E IA  
Sbjct: 573 HSATHLLQKALKTVLGEHVEQAGSYVDADRLRFDFTHFQAMTKEEIEKVENLVNEQIATG 632

Query: 134 SPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPH 187
              + + +S ++A+E     LF  K               E V +   G++  +LC G H
Sbjct: 633 LDVITKEMSLDEAKETGAMALFGEK-------------YGEKVRVVSMGDYSIELCGGTH 679

Query: 188 VRSTGQVKKF 197
           V +T  +  F
Sbjct: 680 VSNTNVISSF 689


>gi|22096207|sp|Q9PH22|SYA_XYLFA RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
          Length = 884

 Score = 40.8 bits (94), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 30/144 (20%), Positives = 63/144 (43%), Gaps = 20/144 (13%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKM 126
           R +  + HS  H++  A++S++    V  G ++  D   +DF   +P ++ ++  IE+ +
Sbjct: 565 RKMVALNHSATHLLHCALRSVFGTHVVQKGSLVAPDRLRFDFSHFEPIAAAQMTLIERMV 624

Query: 127 QEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
            + +  +   + + +  + A +     LF  K               E+V +   G   +
Sbjct: 625 NDEVRANHLVMIEQMGMQAALDAGAMALFGEKY-------------GEHVRVVTMGTSVE 671

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAG 205
           LC G H+  TG +   FK++   G
Sbjct: 672 LCGGTHINRTGDI-GLFKIISECG 694


>gi|15836729|ref|NP_297417.1| alanyl-tRNA synthetase [Xylella fastidiosa 9a5c]
 gi|9104908|gb|AAF82937.1|AE003866_2 alanyl-tRNA synthetase [Xylella fastidiosa 9a5c]
          Length = 916

 Score = 40.8 bits (94), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 30/144 (20%), Positives = 63/144 (43%), Gaps = 20/144 (13%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKM 126
           R +  + HS  H++  A++S++    V  G ++  D   +DF   +P ++ ++  IE+ +
Sbjct: 597 RKMVALNHSATHLLHCALRSVFGTHVVQKGSLVAPDRLRFDFSHFEPIAAAQMTLIERMV 656

Query: 127 QEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
            + +  +   + + +  + A +     LF  K               E+V +   G   +
Sbjct: 657 NDEVRANHLVMIEQMGMQAALDAGAMALFGEKY-------------GEHVRVVTMGTSVE 703

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAG 205
           LC G H+  TG +   FK++   G
Sbjct: 704 LCGGTHINRTGDI-GLFKIISECG 726


>gi|298207536|ref|YP_003715715.1| alanyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
 gi|83850172|gb|EAP88040.1| alanyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
          Length = 870

 Score = 40.8 bits (94), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 34/149 (22%), Positives = 63/149 (42%), Gaps = 20/149 (13%)

Query: 56  EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPF 114
           E + + +     R  +   H+  H++ +A++S+        G ++  G   +DF      
Sbjct: 543 EATFKAVVDSKQRMRSASNHTATHLLHQALRSVLGTHVEQKGSMVHSGNLRFDFSHFSKV 602

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQY-LSHEKARE-----LFESKKEAYKVEILESIPAK 168
           S++EL Q+E  +   I    P  +Q  + H+KA +     LF  K               
Sbjct: 603 SAEELTQVEDFVNARIREQLPLEEQRNIPHQKALDEGAIALFGEK-------------YG 649

Query: 169 ENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
           + V   R G+  +LC G HV +T +++ F
Sbjct: 650 DAVRTIRFGKSMELCGGTHVNNTSEIRHF 678


>gi|326915112|ref|XP_003203865.1| PREDICTED: bifunctional aminoacyl-tRNA synthetase-like [Meleagris
            gallopavo]
          Length = 1778

 Score = 40.8 bits (94), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 63/318 (19%), Positives = 117/318 (36%), Gaps = 58/318 (18%)

Query: 334  FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
             A++P +       +   ++S+R+LP++L ++ +V R E        +R R F   + H 
Sbjct: 1382 IAIRPTSETVMYPAYAKWVQSHRDLPIKLNQWCNVVRWEFKHP-QPFLRTREFLWQEGHT 1440

Query: 394  -FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
             F T E+   E ++I +L   +Y+D     ++    T  EK  G D             +
Sbjct: 1441 AFATYEEAAEEVMQILDLYAQVYEDLLAIPVVKGRKTEKEKFAGGD---------YTTTV 1491

Query: 453  DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
            +   ++S   I        G  +   FE   +D                 P      Y N
Sbjct: 1492 EAFISASGRAIQGATSHHLGQNFSKMFEVTFEDP--------------KKPGEKQYAYQN 1537

Query: 513  SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT----------- 561
            S              +G   R IG+M      N+ L L P  A V  +            
Sbjct: 1538 S--------------WGITTRTIGVMTMIHGDNMGLVLPPRVACVQVVIIPCGITNTLSE 1583

Query: 562  ---SSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKE-ASE 616
                + ++   E    L + ++ +  D R N +  +K     +K +P+ +  G ++  S+
Sbjct: 1584 EDREALLKKCNEYLKRLLNANVRVRADLRDNYSPGWKFNHWELKGVPVRLEVGPRDMKSQ 1643

Query: 617  RSIGIRRFGSTTTQKVSL 634
            + + +RR    T QK++ 
Sbjct: 1644 QFVAVRR---DTGQKLTF 1658


>gi|126695385|ref|YP_001090271.1| alanyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
 gi|205830177|sp|A3PA95|SYA_PROM0 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|126542428|gb|ABO16670.1| Alanyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
          Length = 886

 Score = 40.8 bits (94), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 32/137 (23%), Positives = 62/137 (45%), Gaps = 20/137 (14%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKM 126
           R+ A   H+  H++  A++ I  E     G ++  +   +DF+   P S D++++IE  +
Sbjct: 557 RAKAAANHTATHLLQSALKLIVNESVGQKGSLVAFNKLRFDFNSSNPISKDQISKIETLV 616

Query: 127 QEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEI-LESIPAKENVTLYRQGEWF 180
              I  +     + +S  +A E     +F    E Y  E+ + ++P          G   
Sbjct: 617 NSWIMENHALEIKNMSKSEALEKGAVAMF---GEKYDDEVRVVNVP----------GVSM 663

Query: 181 DLCRGPHVRSTGQVKKF 197
           +LC G HV++T ++  F
Sbjct: 664 ELCGGTHVKTTSELGSF 680


>gi|90416725|ref|ZP_01224655.1| alanyl-tRNA synthetase [marine gamma proteobacterium HTCC2207]
 gi|90331478|gb|EAS46714.1| alanyl-tRNA synthetase [marine gamma proteobacterium HTCC2207]
          Length = 864

 Score = 40.8 bits (94), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 33/134 (24%), Positives = 58/134 (43%), Gaps = 19/134 (14%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSDELAQIEKKM 126
           R+   + HS  H++  A+Q I  E     G +++     +DF   +  S+ ++  IE ++
Sbjct: 545 RTATALNHSATHLLHSALQQILGEHVNQKGSLVDSQRLRFDFSHGESISAQQIRDIEHRV 604

Query: 127 QEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEW-F 180
              I R++P     +S ++A E     LF    E Y  E+           L   G++  
Sbjct: 605 NREILRNTPVQTDVMSMDEAVEKGAMALF---GEKYGSEVR---------VLSMGGDFSV 652

Query: 181 DLCRGPHVRSTGQV 194
           +LC G H   TG +
Sbjct: 653 ELCGGTHANRTGDI 666


>gi|294628346|ref|ZP_06706906.1| alanyl-tRNA synthetase [Streptomyces sp. e14]
 gi|292831679|gb|EFF90028.1| alanyl-tRNA synthetase [Streptomyces sp. e14]
          Length = 890

 Score = 40.8 bits (94), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 41/162 (25%), Positives = 70/162 (43%), Gaps = 15/162 (9%)

Query: 68  RSLAVIR-HSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSDELAQIEKK 125
           R  A+ R HS  H+  +A++          G   + G F +DF       +  +  +E+K
Sbjct: 565 RRKAIARAHSATHLTHQALRDALGPTAAQAGSENQPGRFRFDFGSPSAVPTAVMTDVEQK 624

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF-DLCR 184
           + E++ARD         H +   + E+KK+    E  E     E V +   G++  +LC 
Sbjct: 625 INEVLARDLDV------HAEVMGIDEAKKQGAIAEFGEKY--GERVRVVTIGDFSKELCG 676

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWN 226
           G HV +T Q      L+K+ G    G   R + + +   A+N
Sbjct: 677 GTHVHNTAQ----LGLVKLLGESSIGSGVRRIEALVGVDAYN 714


>gi|282916887|ref|ZP_06324645.1| alanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139]
 gi|283770692|ref|ZP_06343584.1| alanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
 gi|282319374|gb|EFB49726.1| alanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139]
 gi|283460839|gb|EFC07929.1| alanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
          Length = 876

 Score = 40.8 bits (94), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 17/137 (12%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++  A++S+  +     G ++E D   +DF    P ++DE+ Q+E+ + E I + 
Sbjct: 565 HSATHLLHAALKSVLGDHVNQAGSLVEADRLRFDFSHFGPMTNDEIDQVERLVNEEIWKG 624

Query: 134 SPFLKQYLSHEKAREL----FESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
                Q +    A+E+       +K    V ++   P              +LC G HVR
Sbjct: 625 IDVNIQEMDIASAKEMGAMALFGEKYGDVVRVVNMAPFS-----------IELCGGIHVR 673

Query: 190 STGQVKKFFKLMKVAGA 206
           +T ++   FK++  +G 
Sbjct: 674 NTSEI-GLFKIVSESGT 689


>gi|262051273|ref|ZP_06023497.1| alanyl-tRNA synthetase [Staphylococcus aureus 930918-3]
 gi|282920165|ref|ZP_06327890.1| alanyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|259160910|gb|EEW45930.1| alanyl-tRNA synthetase [Staphylococcus aureus 930918-3]
 gi|282594513|gb|EFB99498.1| alanyl-tRNA synthetase [Staphylococcus aureus A9765]
          Length = 876

 Score = 40.8 bits (94), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 17/137 (12%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++  A++S+  +     G ++E D   +DF    P ++DE+ Q+E+ + E I + 
Sbjct: 565 HSATHLLHAALKSVLGDHVNQAGSLVEADRLRFDFSHFGPMTNDEIDQVERLVNEEIWKG 624

Query: 134 SPFLKQYLSHEKAREL----FESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
                Q +    A+E+       +K    V ++   P              +LC G HVR
Sbjct: 625 IDVNIQEMDIASAKEMGAMALFGEKYGDVVRVVNMAPFS-----------IELCGGIHVR 673

Query: 190 STGQVKKFFKLMKVAGA 206
           +T ++   FK++  +G 
Sbjct: 674 NTSEI-GLFKIVSESGT 689


>gi|323439035|gb|EGA96767.1| alanyl-tRNA synthetase [Staphylococcus aureus O11]
 gi|323442822|gb|EGB00447.1| alanyl-tRNA synthetase [Staphylococcus aureus O46]
          Length = 877

 Score = 40.8 bits (94), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 17/137 (12%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++  A++S+  +     G ++E D   +DF    P ++DE+ Q+E+ + E I + 
Sbjct: 566 HSATHLLHAALKSVLGDHVNQAGSLVEADRLRFDFSHFGPMTNDEIDQVERLVNEEIWKG 625

Query: 134 SPFLKQYLSHEKAREL----FESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
                Q +    A+E+       +K    V ++   P              +LC G HVR
Sbjct: 626 IDVNIQEMDIASAKEMGAMALFGEKYGDVVRVVNMAPFS-----------IELCGGIHVR 674

Query: 190 STGQVKKFFKLMKVAGA 206
           +T ++   FK++  +G 
Sbjct: 675 NTSEI-GLFKIVSESGT 690


>gi|253733131|ref|ZP_04867296.1| alanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TCH130]
 gi|253728887|gb|EES97616.1| alanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TCH130]
 gi|329733217|gb|EGG69554.1| alanine--tRNA ligase [Staphylococcus aureus subsp. aureus 21193]
          Length = 877

 Score = 40.8 bits (94), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 17/137 (12%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++  A++S+  +     G ++E D   +DF    P ++DE+ Q+E+ + E I + 
Sbjct: 566 HSATHLLHAALKSVLGDHVNQAGSLVEADRLRFDFSHFGPMTNDEIDQVERLVNEEIWKG 625

Query: 134 SPFLKQYLSHEKAREL----FESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
                Q +    A+E+       +K    V ++   P              +LC G HVR
Sbjct: 626 IDVNIQEMDIASAKEMGAMALFGEKYGDVVRVVNMAPFS-----------IELCGGIHVR 674

Query: 190 STGQVKKFFKLMKVAGA 206
           +T ++   FK++  +G 
Sbjct: 675 NTSEI-GLFKIVSESGT 690


>gi|253732273|ref|ZP_04866438.1| alanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253724062|gb|EES92791.1| alanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
          Length = 877

 Score = 40.8 bits (94), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 17/137 (12%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++  A++S+  +     G ++E D   +DF    P ++DE+ Q+E+ + E I + 
Sbjct: 566 HSATHLLHAALKSVLGDHVNQAGSLVEADRLRFDFSHFGPMTNDEIDQVERLVNEEIWKG 625

Query: 134 SPFLKQYLSHEKAREL----FESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
                Q +    A+E+       +K    V ++   P              +LC G HVR
Sbjct: 626 IDVNIQEMDIASAKEMGAMALFGEKYGDVVRVVNMAPFS-----------IELCGGIHVR 674

Query: 190 STGQVKKFFKLMKVAGA 206
           +T ++   FK++  +G 
Sbjct: 675 NTSEI-GLFKIVSESGT 690


>gi|256419492|ref|YP_003120145.1| alanyl-tRNA synthetase [Chitinophaga pinensis DSM 2588]
 gi|256034400|gb|ACU57944.1| alanyl-tRNA synthetase [Chitinophaga pinensis DSM 2588]
          Length = 871

 Score = 40.8 bits (94), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 34/137 (24%), Positives = 59/137 (43%), Gaps = 7/137 (5%)

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY-YDFDKEQPFSSDELA 120
           +  ++ R    + HS  H++  A++ +        G ++   +  +DF      S +ELA
Sbjct: 548 VINKNNRLSTTMNHSATHLLHAALRQVLGTHVAQKGSLVNPEYLRFDFSHFAKVSDEELA 607

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           QIE+ + E I  + P + + L  E+A +L             E       V +   G   
Sbjct: 608 QIEEIVNEKIRANIPVVIKELPKEEALKL------GAMALFGEKYGDVVRVVVMDPGYSV 661

Query: 181 DLCRGPHVRSTGQVKKF 197
           +LC G HV STG++  F
Sbjct: 662 ELCGGTHVGSTGELGIF 678


>gi|255284144|ref|ZP_05348699.1| phosphoribulokinase family protein [Bryantella formatexigens DSM
           14469]
 gi|255265318|gb|EET58523.1| phosphoribulokinase family protein [Bryantella formatexigens DSM
           14469]
          Length = 554

 Score = 40.8 bits (94), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 32/147 (21%), Positives = 67/147 (45%), Gaps = 4/147 (2%)

Query: 8   TFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPED 66
            F +G  K++    +    A+   +  A   V   ++GK+ +L+  +  G  I  +T  D
Sbjct: 7   VFINGEEKSYMDGTSYLAAAKEYQKEYAHDIVLATVDGKLKELNKRMGNGEHITFVTVAD 66

Query: 67  PRSLAVIRHSCAHIMAEAVQSIWPEVQ---VAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P   +  R S   ++ +A++ +  E Q   V +   + +G Y     ++  ++  L +++
Sbjct: 67  PMGFSAYRRSVLLLLLKAIRQVGGEEQADRVWVHFAVSEGVYITMRGQKSVTAKFLHEVK 126

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELF 150
             M+E+  RD    K+ +  +KA  LF
Sbjct: 127 TAMKELAKRDIVISKEAVDTDKAIALF 153


>gi|167587422|ref|ZP_02379810.1| alanyl-tRNA synthetase [Burkholderia ubonensis Bu]
          Length = 874

 Score = 40.8 bits (94), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 33/137 (24%), Positives = 67/137 (48%), Gaps = 20/137 (14%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H+M +A++ +        G +++ D   +DF    P + DE+ ++E+ + + I  +
Sbjct: 564 HSATHLMHKALREVLGSHVQQKGSLVDADKTRFDFAHNAPMTDDEIRRVEQIVNDEILAN 623

Query: 134 SPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           +P + + + +++A +     LF  +K   +V +L+   ++E            LC G HV
Sbjct: 624 APGIVRVMPYDEAVKGGAMALF-GEKYGDEVRVLDLGFSRE------------LCGGTHV 670

Query: 189 RSTGQVKKFFKLMKVAG 205
             TG +  FFK++   G
Sbjct: 671 SRTGDI-GFFKIVVEGG 686


>gi|161509845|ref|YP_001575504.1| alanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|294848647|ref|ZP_06789393.1| alanyl-tRNA synthetase [Staphylococcus aureus A9754]
 gi|304380785|ref|ZP_07363452.1| alanine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|205830218|sp|A8Z4F6|SYA_STAAT RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|160368654|gb|ABX29625.1| alanine--tRNA ligase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|269941104|emb|CBI49490.1| putative alanyl-tRNA synthetase [Staphylococcus aureus subsp.
           aureus TW20]
 gi|294824673|gb|EFG41096.1| alanyl-tRNA synthetase [Staphylococcus aureus A9754]
 gi|302751447|gb|ADL65624.1| putative alanyl-tRNA synthetase [Staphylococcus aureus subsp.
           aureus str. JKD6008]
 gi|304340661|gb|EFM06594.1| alanine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|320140495|gb|EFW32349.1| alanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA131]
 gi|320144034|gb|EFW35803.1| alanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA177]
 gi|329314293|gb|AEB88706.1| Alanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus T0131]
 gi|329728452|gb|EGG64889.1| alanine--tRNA ligase [Staphylococcus aureus subsp. aureus 21189]
          Length = 877

 Score = 40.8 bits (94), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 17/137 (12%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++  A++S+  +     G ++E D   +DF    P ++DE+ Q+E+ + E I + 
Sbjct: 566 HSATHLLHAALKSVLGDHVNQAGSLVEADRLRFDFSHFGPMTNDEIDQVERLVNEEIWKG 625

Query: 134 SPFLKQYLSHEKAREL----FESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
                Q +    A+E+       +K    V ++   P              +LC G HVR
Sbjct: 626 IDVNIQEMDIASAKEMGAMALFGEKYGDVVRVVNMAPFS-----------IELCGGIHVR 674

Query: 190 STGQVKKFFKLMKVAGA 206
           +T ++   FK++  +G 
Sbjct: 675 NTSEI-GLFKIVSESGT 690


>gi|148270517|ref|YP_001244977.1| alanyl-tRNA synthetase [Thermotoga petrophila RKU-1]
 gi|205830276|sp|A5IMH8|SYA_THEP1 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|147736061|gb|ABQ47401.1| alanyl-tRNA synthetase [Thermotoga petrophila RKU-1]
          Length = 863

 Score = 40.8 bits (94), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 39/155 (25%), Positives = 67/155 (43%), Gaps = 19/155 (12%)

Query: 50  LSDPVREGSIEIITPEDPRSLAVIR-HSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYD 107
           L+  +R G   ++  +  R  A +R H+  H++  A++ +  + V+ A   +  D   +D
Sbjct: 535 LAGTLRRGQKVVLRVDKKRREATMRNHTATHLLHAALKKVLGDHVRQAGSLVAPDRLRFD 594

Query: 108 FDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEIL 162
           F   +  S  E+ Q+E  + E I    P   +Y S+E+A +     LF  K       + 
Sbjct: 595 FTHFKGLSMAEIEQVENLVNEWIMEAIPVEVRYTSYEEAVKSGVVALFTEKYGDVVRVVE 654

Query: 163 ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
               +KE            LC G HV +TGQ+  F
Sbjct: 655 VPGVSKE------------LCGGTHVSNTGQIGLF 677


>gi|57650500|ref|YP_186513.1| alanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
 gi|87161149|ref|YP_494270.1| alanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|88195427|ref|YP_500231.1| alanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|151221731|ref|YP_001332553.1| alanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|221141112|ref|ZP_03565605.1| alanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           JKD6009]
 gi|258450555|ref|ZP_05698617.1| alanyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|284024675|ref|ZP_06379073.1| alanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 132]
 gi|71153554|sp|Q5HFE4|SYA_STAAC RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|122539371|sp|Q2FXV9|SYA_STAA8 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|123485547|sp|Q2FGA8|SYA_STAA3 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|205830217|sp|A6QHF9|SYA_STAAE RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|57284686|gb|AAW36780.1| alanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
 gi|87127123|gb|ABD21637.1| alanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87202985|gb|ABD30795.1| alanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|150374531|dbj|BAF67791.1| alanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|257861713|gb|EEV84512.1| alanyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|315198685|gb|EFU29013.1| alanine--tRNA ligase [Staphylococcus aureus subsp. aureus CGS01]
          Length = 876

 Score = 40.8 bits (94), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 17/137 (12%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++  A++S+  +     G ++E D   +DF    P ++DE+ Q+E+ + E I + 
Sbjct: 565 HSATHLLHAALKSVLGDHVNQAGSLVEADRLRFDFSHFGPMTNDEIDQVERLVNEEIWKG 624

Query: 134 SPFLKQYLSHEKAREL----FESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
                Q +    A+E+       +K    V ++   P              +LC G HVR
Sbjct: 625 IDVNIQEMDIASAKEMGAMALFGEKYGDVVRVVNMAPFS-----------IELCGGIHVR 673

Query: 190 STGQVKKFFKLMKVAGA 206
           +T ++   FK++  +G 
Sbjct: 674 NTSEI-GLFKIVSESGT 689


>gi|145224625|ref|YP_001135303.1| prolyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
 gi|145217111|gb|ABP46515.1| prolyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
          Length = 588

 Score = 40.8 bits (94), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 31/148 (20%), Positives = 61/148 (41%), Gaps = 7/148 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           G G+  W   G K+ + +   +R ++     +EI  P +L +  ++ +  W  Y   +F 
Sbjct: 38  GPGLYSWLPLGLKVLRKIEHIVRSEMDAIGGQEILFPALLPRAPYETTNRWTEYGDTLFR 97

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           ++   D       + L P +             SY++ P+RL +  + YR+E +    G+
Sbjct: 98  LQDRRDN-----DYLLGPTHEEMFTLTVKGEYSSYKDFPLRLYQIQNKYRDE-ARPRAGI 151

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKIH 408
           +R R F   D++ F   +         H
Sbjct: 152 LRGREFLMKDSYSFDVDDDGLKNAYHAH 179


>gi|194334625|ref|YP_002016485.1| (p)ppGpp synthetase I SpoT/RelA [Prosthecochloris aestuarii DSM
           271]
 gi|194312443|gb|ACF46838.1| (p)ppGpp synthetase I, SpoT/RelA [Prosthecochloris aestuarii DSM
           271]
          Length = 732

 Score = 40.8 bits (94), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 1/69 (1%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEII 62
           +I L  P G +K  P  AT  D A SI   +    +   +NGK+  L+  +R G  +E+I
Sbjct: 395 EIYLFTPKGDMKTLPAGATPIDFAYSIHTEIGNGCIGAKVNGKIVRLNSELRSGDRVEVI 454

Query: 63  TPEDPRSLA 71
           T  + +  A
Sbjct: 455 TSRNQKPKA 463


>gi|297527300|ref|YP_003669324.1| glycyl-tRNA synthetase [Staphylothermus hellenicus DSM 12710]
 gi|297256216|gb|ADI32425.1| glycyl-tRNA synthetase [Staphylothermus hellenicus DSM 12710]
          Length = 588

 Score = 40.8 bits (94), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 2/71 (2%)

Query: 336 LKPMNCPGHVAVFNHGLKSYR-ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           L+P    G  A F H L   R +LP+ +A+ G V RNE S    GL+R+R FT  +   F
Sbjct: 165 LRPETAQGMFASFKHVLNIARNKLPLGIAQIGRVGRNEISPR-QGLLRLREFTIMELEFF 223

Query: 395 CTKEQMFNECL 405
              E+   E +
Sbjct: 224 FDPEKALEETM 234


>gi|258424044|ref|ZP_05686926.1| alanyl-tRNA synthetase [Staphylococcus aureus A9635]
 gi|257845665|gb|EEV69697.1| alanyl-tRNA synthetase [Staphylococcus aureus A9635]
          Length = 877

 Score = 40.8 bits (94), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 17/137 (12%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++  A++S+  +     G ++E D   +DF    P ++DE+ Q+E+ + E I + 
Sbjct: 566 HSATHLLHAALKSVLGDHVNQAGSLVEADRLRFDFSHFGPMTNDEIDQVERLVNEEIWKG 625

Query: 134 SPFLKQYLSHEKAREL----FESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
                Q +    A+E+       +K    V ++   P              +LC G HVR
Sbjct: 626 IDVNIQEMDIASAKEMGAMALFGEKYGDVVRVVNMAPFS-----------IELCGGIHVR 674

Query: 190 STGQVKKFFKLMKVAGA 206
           +T ++   FK++  +G 
Sbjct: 675 NTSEI-GLFKIVSESGT 690


>gi|251783202|ref|YP_002997507.1| seryl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|242391834|dbj|BAH82293.1| seryl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
          Length = 425

 Score = 40.8 bits (94), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 36/172 (20%), Positives = 73/172 (42%), Gaps = 12/172 (6%)

Query: 262 GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           G+  +F+   G ++ + L ++M    IK+ Y+EI TP +++      +G +  ++ + F 
Sbjct: 160 GARFLFYKNLGARLERALYNFMLDEHIKEGYQEIITPYMVNHDSMFGTGQYPKFKEDTFE 219

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---L 377
           +    DT      F L P         +   +   +ELP+        +R+E   +    
Sbjct: 220 LS---DT-----NFVLIPTAEVPLTNYYRGEILDGKELPIYFTAMSPSFRSEAGSAGRDT 271

Query: 378 HGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
            GL+R+  F + +   F   E+ + E  K+     +I +  G    ++ L T
Sbjct: 272 RGLIRLHQFHKVEMVKFAKPEESYQELEKMTANAENILQKLGLPYRVIALCT 323


>gi|157826336|ref|YP_001494056.1| alanyl-tRNA synthetase [Rickettsia akari str. Hartford]
 gi|205830190|sp|A8GQ73|SYA_RICAH RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|157800294|gb|ABV75548.1| alanyl-tRNA synthetase [Rickettsia akari str. Hartford]
          Length = 878

 Score = 40.8 bits (94), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 57/129 (44%), Gaps = 14/129 (10%)

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY-YDFDKEQPFSSDELAQIEKKMQEIIA 131
           I HS  HI+   +  +  +     G ++   +  +D    +  + +E+  IE K+ EII 
Sbjct: 565 IHHSATHILHAVLHEVLGQHVTQKGSLVAPTYLRFDISHSKAVTHEEITSIEDKVNEII- 623

Query: 132 RDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK--ENVTLYRQGEW-FDLCRGPHV 188
           RD+        HE    L  + ++A K  ++     K    V + + GE   +LC G HV
Sbjct: 624 RDN--------HEVNTTLM-TTEDAVKQGVMALFGEKYDSEVRVVKMGETSLELCGGTHV 674

Query: 189 RSTGQVKKF 197
           R TG +  F
Sbjct: 675 RRTGDIGSF 683


>gi|330998231|ref|ZP_08322057.1| alanine--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
 gi|329568923|gb|EGG50721.1| alanine--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
          Length = 871

 Score = 40.8 bits (94), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 30/131 (22%), Positives = 61/131 (46%), Gaps = 10/131 (7%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY-YDFDKEQPFSSDELAQIEK 124
           D R+ +   H+C H++ +A++++  E     G ++   +  +DF   Q  + ++L ++E+
Sbjct: 553 DLRAASEANHTCTHLLDQALRTVLGEHVEQKGSLVTPEYLRFDFSHFQKVTDEQLREVER 612

Query: 125 KMQEIIARDSPFLKQY-LSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +   I  D P      +  EKA+EL        K          + V + + G+  + C
Sbjct: 613 IVNAKIREDLPLQDHRDMPIEKAKELGAIALFGEKY--------GDRVRVVQFGDSVEFC 664

Query: 184 RGPHVRSTGQV 194
            G H +STG++
Sbjct: 665 GGCHAKSTGRI 675


>gi|325846721|ref|ZP_08169636.1| alanine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
 gi|325481479|gb|EGC84520.1| alanine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
          Length = 870

 Score = 40.8 bits (94), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 72/147 (48%), Gaps = 22/147 (14%)

Query: 68  RSLAVIR-HSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           R L + R H+  H++ +A+++I  E V+ A   + E+   +DF      S DE+ +IE +
Sbjct: 555 RRLDITRNHTATHLLDQALRNILNEDVKQAGSLVDEEKLRFDFTYPNALSDDEIEKIENE 614

Query: 126 MQEIIARDSPFLKQYLSHEKARE-----LFESK-KEAYKVEILESIPAKENVTLYRQGEW 179
           + E I +     K+ + ++++ +     LFE K K+  +V  ++                
Sbjct: 615 INEKIRQQLKVKKEIMPYKESEKLGAIGLFEDKYKDMVRVVSIDDYS------------- 661

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGA 206
            +LC G HV ++ +V   FK+++ + A
Sbjct: 662 IELCGGCHVNNSSEV-LMFKILQESSA 687


>gi|302333292|gb|ADL23485.1| putative alanyl-tRNA synthetase [Staphylococcus aureus subsp.
           aureus JKD6159]
          Length = 876

 Score = 40.8 bits (94), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 17/137 (12%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++  A++S+  +     G ++E D   +DF    P ++DE+ Q+E+ + E I + 
Sbjct: 565 HSATHLLHAALKSVLGDHVNQAGSLVEADRLRFDFSHFGPMTNDEIDQVERLVNEEIWKG 624

Query: 134 SPFLKQYLSHEKAREL----FESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
                Q +    A+E+       +K    V ++   P              +LC G HVR
Sbjct: 625 IDVNIQEMDIASAKEMGAMALFGEKYGDVVRVVNMAPFS-----------IELCGGIHVR 673

Query: 190 STGQVKKFFKLMKVAGA 206
           +T ++   FK++  +G 
Sbjct: 674 NTSEI-GLFKIVSESGT 689


>gi|300113492|ref|YP_003760067.1| alanyl-tRNA synthetase [Nitrosococcus watsonii C-113]
 gi|299539429|gb|ADJ27746.1| alanyl-tRNA synthetase [Nitrosococcus watsonii C-113]
          Length = 874

 Score = 40.8 bits (94), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 35/140 (25%), Positives = 60/140 (42%), Gaps = 11/140 (7%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFSSDELAQIEKKM 126
           R+   + HS  H++  A++ +  E     G ++  D   +DF   +   S +L QIE  +
Sbjct: 551 RTPTRLNHSATHLLHAALREVLGESVAQKGSLVASDRLRFDFSHLEAVQSGQLRQIEHLI 610

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRG 185
              I  + P   Q +  ++A +          V  L      E V + R G++  +LC G
Sbjct: 611 NAKIRANLPVETQLMPLQQALD--------AGVVALFGEKYGEQVRVLRMGDFSMELCGG 662

Query: 186 PHVRSTGQVKKFFKLMKVAG 205
            HV  TG +   FK++   G
Sbjct: 663 THVDRTGDI-GLFKIINEMG 681


>gi|167627901|ref|YP_001678401.1| alanyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|205830099|sp|B0TZY8|SYA_FRAP2 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|167597902|gb|ABZ87900.1| Alanine--tRNA ligase [Francisella philomiragia subsp. philomiragia
           ATCC 25017]
          Length = 865

 Score = 40.8 bits (94), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 35/140 (25%), Positives = 60/140 (42%), Gaps = 11/140 (7%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSDELAQIEKKM 126
           R      HS  H++ + ++ I        G +++D    +DF  ++  S  E+ QIE  +
Sbjct: 547 RLATAANHSATHLLHKVLKIILGSHAEQKGSLVDDNKLRFDFTHDKAISRVEIEQIETLV 606

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRG 185
            + I  + P      S EKA+ L          E L      + V +   G++  +LC G
Sbjct: 607 NQQIRANYPVATIETSQEKAKSL--------GAEALFGEKYGDIVRVISMGDFSIELCGG 658

Query: 186 PHVRSTGQVKKFFKLMKVAG 205
            HV  TG +   FK++  +G
Sbjct: 659 THVAYTGDI-GLFKIVSESG 677


>gi|326577502|gb|EGE27382.1| alanyl-tRNA synthetase [Moraxella catarrhalis O35E]
          Length = 893

 Score = 40.8 bits (94), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 34/145 (23%), Positives = 66/145 (45%), Gaps = 14/145 (9%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKM 126
           R+ +   HS  H++  A+++I  +     G ++  D   +DF  ++P +   ++QIE  +
Sbjct: 563 RASSAKNHSATHLLHAALRTILGDGVSQKGSMVSSDLLRFDFSYDKPLTEQNISQIETMV 622

Query: 127 QEIIARDSPFLKQYLSHEKARE----LFESKKEAYKVEILESIPAKENVTLYRQGEWF-- 180
            + I  ++P   + L  + A+     +   +K    V +L         T  + G+ F  
Sbjct: 623 NQQILANTPAHVEILDIDSAKNKGAMMLFGEKYGDTVRVLSM------GTTDKDGKPFSI 676

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAG 205
           +LC G HV  TG +   FK++   G
Sbjct: 677 ELCGGLHVTRTGDI-GLFKIISEQG 700


>gi|149194975|ref|ZP_01872068.1| alanyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
 gi|149134896|gb|EDM23379.1| alanyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
          Length = 846

 Score = 40.8 bits (94), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 33/139 (23%), Positives = 66/139 (47%), Gaps = 11/139 (7%)

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELA 120
           +  E  R +A   HS  H++  A++ +  E     G ++E +   +DF   +  S +EL 
Sbjct: 539 VVDESRREIAK-HHSATHLLHSALRKVLGEHITQAGSLVEANRLRFDFTHPKALSKEELN 597

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW- 179
           +IE+ +  +IAR        +S ++A++L            L      + V + + G++ 
Sbjct: 598 KIEEMVNRVIARGFEGEVSEMSIDEAKKL--------GAMALFGEKYGDIVRVVKFGDFS 649

Query: 180 FDLCRGPHVRSTGQVKKFF 198
            +LC G HV++T ++  F+
Sbjct: 650 IELCGGTHVKNTSEIGSFY 668


>gi|21283297|ref|NP_646385.1| alanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
 gi|49486451|ref|YP_043672.1| alanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|297207662|ref|ZP_06924097.1| alanine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|300911744|ref|ZP_07129187.1| alanine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
 gi|33301697|sp|Q8NW87|SYA_STAAW RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|56749384|sp|Q6G8V1|SYA_STAAS RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|21204737|dbj|BAB95433.1| alanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
 gi|49244894|emb|CAG43355.1| putative alanyl-tRNA synthetase [Staphylococcus aureus subsp.
           aureus MSSA476]
 gi|296887679|gb|EFH26577.1| alanine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|300885990|gb|EFK81192.1| alanine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
          Length = 876

 Score = 40.8 bits (94), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 17/137 (12%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++  A++S+  +     G ++E D   +DF    P ++DE+ Q+E+ + E I + 
Sbjct: 565 HSATHLLHAALKSVLGDHVNQAGSLVEADRLRFDFSHFGPMTNDEIDQVERLVNEEIWKG 624

Query: 134 SPFLKQYLSHEKAREL----FESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
                Q +    A+E+       +K    V ++   P              +LC G HVR
Sbjct: 625 IDVNIQEMDIASAKEMGAMALFGEKYGDVVRVVNMAPFS-----------IELCGGIHVR 673

Query: 190 STGQVKKFFKLMKVAGA 206
           +T ++   FK++  +G 
Sbjct: 674 NTSEI-GLFKIVSESGT 689


>gi|326561486|gb|EGE11830.1| alanyl-tRNA synthetase [Moraxella catarrhalis 46P47B1]
          Length = 893

 Score = 40.8 bits (94), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 34/145 (23%), Positives = 66/145 (45%), Gaps = 14/145 (9%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKM 126
           R+ +   HS  H++  A+++I  +     G ++  D   +DF  ++P +   ++QIE  +
Sbjct: 563 RASSAKNHSATHLLHAALRTILGDGVSQKGSMVSSDLLRFDFSYDKPLTEQNISQIETMV 622

Query: 127 QEIIARDSPFLKQYLSHEKARE----LFESKKEAYKVEILESIPAKENVTLYRQGEWF-- 180
            + I  ++P   + L  + A+     +   +K    V +L         T  + G+ F  
Sbjct: 623 NQQILANTPAHVEILDIDSAKNKGAMMLFGEKYGDTVRVLSM------GTTDKDGKPFSI 676

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAG 205
           +LC G HV  TG +   FK++   G
Sbjct: 677 ELCGGLHVTRTGDI-GLFKIISEQG 700


>gi|212696194|ref|ZP_03304322.1| hypothetical protein ANHYDRO_00730 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212676823|gb|EEB36430.1| hypothetical protein ANHYDRO_00730 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 867

 Score = 40.8 bits (94), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 72/147 (48%), Gaps = 22/147 (14%)

Query: 68  RSLAVIR-HSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           R L + R H+  H++ +A+++I  E V+ A   + E+   +DF      S DE+ +IE +
Sbjct: 555 RRLDITRNHTATHLLDQALRNILNEDVKQAGSLVDEEKLRFDFTYPNALSDDEIRKIENE 614

Query: 126 MQEIIARDSPFLKQYLSHEKARE-----LFESK-KEAYKVEILESIPAKENVTLYRQGEW 179
           + E I +     K+ + ++++ +     LFE K K+  +V  ++                
Sbjct: 615 INEKIRQQLKVKKEIMPYKESEKLGAIGLFEDKYKDMVRVVSIDDYS------------- 661

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGA 206
            +LC G HV ++ +V   FK+++ + A
Sbjct: 662 IELCGGCHVNNSSEV-LMFKILQESSA 687


>gi|326576631|gb|EGE26538.1| alanyl-tRNA synthetase [Moraxella catarrhalis 101P30B1]
          Length = 893

 Score = 40.8 bits (94), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 34/145 (23%), Positives = 66/145 (45%), Gaps = 14/145 (9%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKM 126
           R+ +   HS  H++  A+++I  +     G ++  D   +DF  ++P +   ++QIE  +
Sbjct: 563 RASSAKNHSATHLLHAALRTILGDGVSQKGSMVSSDLLRFDFSYDKPLTEQNISQIETMV 622

Query: 127 QEIIARDSPFLKQYLSHEKARE----LFESKKEAYKVEILESIPAKENVTLYRQGEWF-- 180
            + I  ++P   + L  + A+     +   +K    V +L         T  + G+ F  
Sbjct: 623 NQQILANTPAHVEILDIDSAKNKGAMMLFGEKYGDTVRVLSM------GTTDKDGKPFSI 676

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAG 205
           +LC G HV  TG +   FK++   G
Sbjct: 677 ELCGGLHVTRTGDI-GLFKIISEQG 700


>gi|298694898|gb|ADI98120.1| alanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED133]
          Length = 876

 Score = 40.8 bits (94), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 17/137 (12%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++  A++S+  +     G ++E D   +DF    P ++DE+ Q+E+ + E I + 
Sbjct: 565 HSATHLLHAALKSVLGDHVNQAGSLVEADRLRFDFSHFGPMTNDEIDQVERLVNEEIWKG 624

Query: 134 SPFLKQYLSHEKAREL----FESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
                Q +    A+E+       +K    V ++   P              +LC G HVR
Sbjct: 625 IDVNIQEMDIASAKEMGAMALFGEKYGDVVRVVNMAPFS-----------IELCGGIHVR 673

Query: 190 STGQVKKFFKLMKVAGA 206
           +T ++   FK++  +G 
Sbjct: 674 NTSEI-GLFKIVSESGT 689


>gi|283470895|emb|CAQ50106.1| alanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ST398]
          Length = 877

 Score = 40.8 bits (94), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 17/137 (12%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++  A++S+  +     G ++E D   +DF    P ++DE+ Q+E+ + E I + 
Sbjct: 566 HSATHLLHAALKSVLGDHVNQAGSLVEADRLRFDFSHFGPMTNDEIDQVERLVNEEIWKG 625

Query: 134 SPFLKQYLSHEKAREL----FESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
                Q +    A+E+       +K    V ++   P              +LC G HVR
Sbjct: 626 IDVNIQEMDIASAKEMGAMALFGEKYGDVVRVVNMAPFS-----------IELCGGIHVR 674

Query: 190 STGQVKKFFKLMKVAGA 206
           +T ++   FK++  +G 
Sbjct: 675 NTSEI-GLFKIVSESGT 690


>gi|111023587|ref|YP_706559.1| prolyl-tRNA synthetase [Rhodococcus jostii RHA1]
 gi|122955090|sp|Q0S235|SYP1_RHOSR RecName: Full=Prolyl-tRNA synthetase 1; AltName: Full=Proline--tRNA
           ligase 1; Short=ProRS 1
 gi|110823117|gb|ABG98401.1| proline--tRNA ligase [Rhodococcus jostii RHA1]
          Length = 581

 Score = 40.8 bits (94), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 63/143 (44%), Gaps = 15/143 (10%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           +EI+ P +L +  ++ S  W  Y   +F +K  D    D        +  P H  +F   
Sbjct: 69  QEISLPALLPREPYEASNRWTEYGDGLFRLK--DRKGGDY-------LLGPTHEELFALT 119

Query: 352 LK----SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
           +K    SY++ PV L +  + YR+E      G++R R F   D++ F   ++      + 
Sbjct: 120 VKGEYNSYKDFPVTLYQVQTKYRDEER-PRAGILRGREFVMKDSYSFDLTDEGLTASYRA 178

Query: 408 H-NLIISIYKDFGFEKIMVKLST 429
           H +    I+   G + ++V  ++
Sbjct: 179 HRDAYERIFSRLGVKYVIVSATS 201


>gi|147920334|ref|YP_685893.1| glycyl-tRNA synthetase [uncultured methanogenic archaeon RC-I]
 gi|110621289|emb|CAJ36567.1| glycyl-tRNA synthetase [uncultured methanogenic archaeon RC-I]
          Length = 577

 Score = 40.8 bits (94), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 4/85 (4%)

Query: 336 LKPMNCPGHVAVFNHGLKSYRE-LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           ++P    G    F   L+ YRE LP  + + G  YRNE S    G++R+R FTQ +A VF
Sbjct: 158 MRPETAQGMFVDFPRLLRFYREKLPFGVTQIGKSYRNEIS-PRQGVIRLREFTQAEAEVF 216

Query: 395 CTKE--QMFNECLKIHNLIISIYKD 417
              +          + +L++ +Y +
Sbjct: 217 VNPQFKNKHPNFAAVKDLVLPLYDE 241


>gi|82751218|ref|YP_416959.1| alanyl-tRNA synthetase [Staphylococcus aureus RF122]
 gi|123547858|sp|Q2YT60|SYA_STAAB RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|82656749|emb|CAI81178.1| alanyl-tRNA synthetase [Staphylococcus aureus RF122]
          Length = 876

 Score = 40.8 bits (94), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 17/137 (12%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++  A++S+  +     G ++E D   +DF    P ++DE+ Q+E+ + E I + 
Sbjct: 565 HSATHLLHAALKSVLGDHVNQAGSLVEADRLRFDFSHFGPMTNDEIDQVERLVNEEIWKG 624

Query: 134 SPFLKQYLSHEKAREL----FESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
                Q +    A+E+       +K    V ++   P              +LC G HVR
Sbjct: 625 IDVNIQEMDIASAKEMGAMALFGEKYGDVVRVVNMAPFS-----------IELCGGIHVR 673

Query: 190 STGQVKKFFKLMKVAGA 206
           +T ++   FK++  +G 
Sbjct: 674 NTSEI-GLFKIVSESGT 689


>gi|315444957|ref|YP_004077836.1| prolyl-tRNA synthetase, family II [Mycobacterium sp. Spyr1]
 gi|315263260|gb|ADU00002.1| prolyl-tRNA synthetase, family II [Mycobacterium sp. Spyr1]
          Length = 584

 Score = 40.8 bits (94), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 31/148 (20%), Positives = 61/148 (41%), Gaps = 7/148 (4%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           G G+  W   G K+ + +   +R ++     +EI  P +L +  ++ +  W  Y   +F 
Sbjct: 34  GPGLYSWLPLGLKVLRKIEHIVRSEMDAIGGQEILFPALLPRAPYETTNRWTEYGDTLFR 93

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           ++   D       + L P +             SY++ P+RL +  + YR+E +    G+
Sbjct: 94  LQDRRDN-----DYLLGPTHEEMFTLTVKGEYSSYKDFPLRLYQIQNKYRDE-ARPRAGI 147

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKIH 408
           +R R F   D++ F   +         H
Sbjct: 148 LRGREFLMKDSYSFDVDDDGLKNAYHAH 175


>gi|255280796|ref|ZP_05345351.1| GTP diphosphokinase [Bryantella formatexigens DSM 14469]
 gi|255268733|gb|EET61938.1| GTP diphosphokinase [Bryantella formatexigens DSM 14469]
          Length = 774

 Score = 40.8 bits (94), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 1/61 (1%)

Query: 10  PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPEDPR 68
           P G +KN P  +T  D A ++  ++  K V   +NGK+ ++   ++ G  +EIIT ++ R
Sbjct: 433 PAGDVKNLPAGSTPIDFAYNVHSAVGNKMVGARVNGKLVNIDYVIQNGDRVEIITSQNSR 492

Query: 69  S 69
            
Sbjct: 493 G 493


>gi|15675591|ref|NP_269765.1| seryl-tRNA synthetase [Streptococcus pyogenes M1 GAS]
 gi|71911296|ref|YP_282846.1| seryl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
 gi|306826795|ref|ZP_07460097.1| serine--tRNA ligase [Streptococcus pyogenes ATCC 10782]
 gi|30173206|sp|Q99YE2|SYS_STRP1 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|13622796|gb|AAK34486.1| putative seryl-tRNA synthetase [Streptococcus pyogenes M1 GAS]
 gi|71854078|gb|AAZ52101.1| seryl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
 gi|304431084|gb|EFM34091.1| serine--tRNA ligase [Streptococcus pyogenes ATCC 10782]
          Length = 425

 Score = 40.8 bits (94), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 36/172 (20%), Positives = 73/172 (42%), Gaps = 12/172 (6%)

Query: 262 GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           G+  +F+   G ++ + L ++M    IK+ Y+EI TP +++      +G +  ++ + F 
Sbjct: 160 GARFLFYKNLGARLERALYNFMLDEHIKEGYQEIITPYMVNHDSMFGTGQYPKFKEDTFE 219

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---L 377
           +    DT      F L P         +   +   +ELP+        +R+E   +    
Sbjct: 220 LA---DT-----NFVLIPTAEVPLTNYYRGEILDGKELPIYFTAMSPSFRSEAGSAGRDT 271

Query: 378 HGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
            GL+R+  F + +   F   E+ + E  K+     +I +  G    ++ L T
Sbjct: 272 RGLIRLHQFHKVEMVKFAKPEESYQELEKMTANAENILQKLGLPYRVISLCT 323


>gi|19746699|ref|NP_607835.1| seryl-tRNA synthetase [Streptococcus pyogenes MGAS8232]
 gi|50914823|ref|YP_060795.1| seryl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
 gi|30173174|sp|Q8NZN7|SYS_STRP8 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|67461685|sp|Q5XAF1|SYS_STRP6 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|19748923|gb|AAL98334.1| putative seryl-tRNA synthetase [Streptococcus pyogenes MGAS8232]
 gi|50903897|gb|AAT87612.1| Seryl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
          Length = 425

 Score = 40.8 bits (94), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 36/172 (20%), Positives = 73/172 (42%), Gaps = 12/172 (6%)

Query: 262 GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           G+  +F+   G ++ + L ++M    IK+ Y+EI TP +++      +G +  ++ + F 
Sbjct: 160 GARFLFYKNLGARLERALYNFMLDEHIKEGYQEIITPYMVNHDSMFGTGQYPKFKEDTFE 219

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---L 377
           +    DT      F L P         +   +   +ELP+        +R+E   +    
Sbjct: 220 LA---DT-----NFVLIPTAEVPLTNYYRGEILDGKELPIYFTAMSPSFRSEAGSAGRDT 271

Query: 378 HGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
            GL+R+  F + +   F   E+ + E  K+     +I +  G    ++ L T
Sbjct: 272 RGLIRLHQFHKVEMVKFAKPEESYQELEKMTANAENILQKLGLPYRVISLCT 323


>gi|237708798|ref|ZP_04539279.1| LOW QUALITY PROTEIN: alanyl-tRNA synthetase [Bacteroides sp.
           9_1_42FAA]
 gi|229457224|gb|EEO62945.1| LOW QUALITY PROTEIN: alanyl-tRNA synthetase [Bacteroides sp.
           9_1_42FAA]
          Length = 465

 Score = 40.8 bits (94), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 33/133 (24%), Positives = 59/133 (44%), Gaps = 14/133 (10%)

Query: 66  DPRSLAVIRHSCAHIMAEAV-QSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           + R+     HSC H++ EA+ Q +   V+     +  +   +DF   Q  + ++L ++E 
Sbjct: 147 EKRAACAANHSCTHLLDEALRQVLGTHVEQKGSLVTPESLRFDFSHFQKVTDEQLREVEH 206

Query: 125 KMQEIIARDSPFLK-QYLSHEKARELFESK--KEAYKVEILESIPAKENVTLYRQGEWFD 181
            +   I  + P  + + L  EKA+EL       E Y  E          V + + G   +
Sbjct: 207 LVNAKIRENIPLTEYRNLPIEKAKELGAIALFGEKYGDE----------VRVVQFGNSIE 256

Query: 182 LCRGPHVRSTGQV 194
            C G HV +TG++
Sbjct: 257 FCGGTHVSATGKI 269


>gi|118469604|ref|YP_887342.1| alanyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
 gi|205830154|sp|A0QWQ4|SYA_MYCS2 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|118170891|gb|ABK71787.1| alanyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
          Length = 896

 Score = 40.8 bits (94), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 55/132 (41%), Gaps = 9/132 (6%)

Query: 66  DP--RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY-YDFDKEQPFSSDELAQI 122
           DP  R  A   HS  H++  A++ +     V  G +   G+  +DF+ + P S D+  QI
Sbjct: 569 DPKWRRGATQGHSGTHMVHAALREVLGPNAVQAGSLNRPGYLRFDFNWQGPLSDDQRTQI 628

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E+   + +  D      Y  H    EL ++K         E  P +  V         +L
Sbjct: 629 EEVTNQAVEAD------YEVHTFVTELEKAKAMGAMAMFGERYPDQVRVVEIGGPFSLEL 682

Query: 183 CRGPHVRSTGQV 194
           C G HV ++ Q+
Sbjct: 683 CGGTHVHNSAQI 694


>gi|94991059|ref|YP_599159.1| seryl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
 gi|166223297|sp|Q1JFE4|SYS_STRPD RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|94544567|gb|ABF34615.1| Seryl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
          Length = 425

 Score = 40.8 bits (94), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 36/172 (20%), Positives = 73/172 (42%), Gaps = 12/172 (6%)

Query: 262 GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           G+  +F+   G ++ + L ++M    IK+ Y+EI TP +++      +G +  ++ + F 
Sbjct: 160 GARFLFYKNLGARLERALYNFMLDEHIKEGYQEIITPYMVNHDSMFGTGQYPKFKEDTFE 219

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---L 377
           +    DT      F L P         +   +   +ELP+        +R+E   +    
Sbjct: 220 LA---DT-----NFVLIPTAEVPLTNYYRGEILDGKELPIYFTAMSPSFRSEAGSAGRDT 271

Query: 378 HGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
            GL+R+  F + +   F   E+ + E  K+     +I +  G    ++ L T
Sbjct: 272 RGLIRLHQFHKVEMVKFAKPEESYQELEKMTANAENILQKLGLPYRVISLCT 323


>gi|126434971|ref|YP_001070662.1| alanyl-tRNA synthetase [Mycobacterium sp. JLS]
 gi|205830155|sp|A3PZ44|SYA_MYCSJ RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|126234771|gb|ABN98171.1| alanyl-tRNA synthetase [Mycobacterium sp. JLS]
          Length = 897

 Score = 40.8 bits (94), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 56/132 (42%), Gaps = 9/132 (6%)

Query: 66  DPR--SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY-YDFDKEQPFSSDELAQI 122
           DPR    A   HS  H++  A++ +     V  G +   G+  +DF+ +   + D+  QI
Sbjct: 570 DPRWRHGATQGHSGTHMVHAALRQVLGPNAVQAGSLNRPGYLRFDFNWQGALTDDQRTQI 629

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E+   E +  D      +  H    EL ++K         E+ P +  V         +L
Sbjct: 630 EEVTNEAVEAD------FEVHSFTTELEKAKSMGAMALFGEAYPDEVRVVEIGGPFSLEL 683

Query: 183 CRGPHVRSTGQV 194
           C G HVRS+ Q+
Sbjct: 684 CGGTHVRSSAQI 695


>gi|108799313|ref|YP_639510.1| alanyl-tRNA synthetase [Mycobacterium sp. MCS]
 gi|119868429|ref|YP_938381.1| alanyl-tRNA synthetase [Mycobacterium sp. KMS]
 gi|123178848|sp|Q1B9I0|SYA_MYCSS RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|205830156|sp|A1UFI3|SYA_MYCSK RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|108769732|gb|ABG08454.1| alanyl-tRNA synthetase [Mycobacterium sp. MCS]
 gi|119694518|gb|ABL91591.1| alanyl-tRNA synthetase [Mycobacterium sp. KMS]
          Length = 897

 Score = 40.8 bits (94), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 56/132 (42%), Gaps = 9/132 (6%)

Query: 66  DPR--SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY-YDFDKEQPFSSDELAQI 122
           DPR    A   HS  H++  A++ +     V  G +   G+  +DF+ +   + D+  QI
Sbjct: 570 DPRWRHGATQGHSGTHMVHAALRQVLGPNAVQAGSLNRPGYLRFDFNWQGALTDDQRTQI 629

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E+   E +  D      +  H    EL ++K         E+ P +  V         +L
Sbjct: 630 EEVTNEAVEAD------FEVHSFTTELEKAKSMGAMALFGEAYPDEVRVVEIGGPFSLEL 683

Query: 183 CRGPHVRSTGQV 194
           C G HVRS+ Q+
Sbjct: 684 CGGTHVRSSAQI 695


>gi|297812419|ref|XP_002874093.1| aminoacyl-tRNA synthetase family protein [Arabidopsis lyrata subsp.
           lyrata]
 gi|297319930|gb|EFH50352.1| aminoacyl-tRNA synthetase family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 978

 Score = 40.8 bits (94), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 31/145 (21%), Positives = 63/145 (43%), Gaps = 17/145 (11%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSD 117
           +E     D R  A + H+  H++  A++ +  +     G ++  D   +DF+  +    +
Sbjct: 639 VEAAVDADLRQRAKVHHTATHLLQSALKKVVGQETSQAGSLVAFDRLRFDFNINRSLHDN 698

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVT 172
           EL +IE+ +   I   +    + L    A+      +F  K +  +V ++E +P      
Sbjct: 699 ELKEIERLINRWIGDATRLETKVLPLADAKRAGAIAMFGEKYDENEVRVVE-VP------ 751

Query: 173 LYRQGEWFDLCRGPHVRSTGQVKKF 197
               G   +LC G HV +T +++ F
Sbjct: 752 ----GVSMELCGGTHVGNTAEIRAF 772


>gi|190346699|gb|EDK38847.2| hypothetical protein PGUG_02945 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 462

 Score = 40.8 bits (94), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 50/215 (23%), Positives = 81/215 (37%), Gaps = 16/215 (7%)

Query: 245 DHRKLAREMDL--FHIAEDGSGVIFWH--RKGWKIFQTLISYMRRKIKD-DYEEINTPQV 299
           DHR++A  + +  F  A   SG  +++    G  + Q L+ Y  +K +   Y  +  P +
Sbjct: 175 DHREIAENLSIVDFQSAAKVSGSSWYYLIGDGALLEQALVQYGLKKARQYGYRMVTPPSI 234

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           +        G   + + N   +   +     L   A  P+        F +G K     P
Sbjct: 235 VKNEFVHACGFKPNDQNNEKQIYGIEGGNLSLTGTAEIPLGAIHSGTDFENGQK----FP 290

Query: 360 VRLAEFGSVYRNEPSG---SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ++       YR E         GL RV  FT+ +   F T E    E   +  L   I +
Sbjct: 291 IKYVGVSRAYRAEAGARGKDTKGLYRVHEFTKVELFHFTTPEYAKQELEDLRQLQTEIIE 350

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWD-DAENIMKG 450
           + G    M+K+   P   +G+ AL   D E  M G
Sbjct: 351 ELGLMSKMIKM---PADDLGAPALMKYDCEAWMPG 382


>gi|160879109|ref|YP_001558077.1| alanyl-tRNA synthetase [Clostridium phytofermentans ISDg]
 gi|205829960|sp|A9KLZ5|SYA2_CLOPH RecName: Full=Alanyl-tRNA synthetase 2; AltName: Full=Alanine--tRNA
           ligase 2; Short=AlaRS 2
 gi|160427775|gb|ABX41338.1| Alanine--tRNA ligase [Clostridium phytofermentans ISDg]
          Length = 591

 Score = 40.8 bits (94), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 63/130 (48%), Gaps = 20/130 (15%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           H+  H++  A++++        G  I E+   +DF   +  + +EL ++E+ + E I   
Sbjct: 453 HTATHLLNGALRTVLGTDVFQRGSNITEERLRFDFSFHRKLTKEELEEVERIVNEAIRNQ 512

Query: 134 SPFLKQYLSHEKAREL-----FESK-KEAYKVEILESIPAKENVTLYRQGEWFDLCRGPH 187
              L + ++ ++A+EL     FE K  E  KV +   IP          G   ++C GPH
Sbjct: 513 IDVLCEEMTVKEAKELGAVGIFEDKYGEVVKVYM---IP----------GYSKEICGGPH 559

Query: 188 VRSTGQVKKF 197
           V++T ++K F
Sbjct: 560 VKNTSELKSF 569


>gi|21911052|ref|NP_665320.1| seryl-tRNA synthetase [Streptococcus pyogenes MGAS315]
 gi|28895262|ref|NP_801612.1| seryl-tRNA synthetase [Streptococcus pyogenes SSI-1]
 gi|30173169|sp|Q8K635|SYS_STRP3 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|21905261|gb|AAM80123.1| putative seryl-tRNA synthetase [Streptococcus pyogenes MGAS315]
 gi|28810508|dbj|BAC63445.1| putative seryl-tRNA synthetase [Streptococcus pyogenes SSI-1]
          Length = 425

 Score = 40.8 bits (94), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 36/172 (20%), Positives = 73/172 (42%), Gaps = 12/172 (6%)

Query: 262 GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           G+  +F+   G ++ + L ++M    IK+ Y+EI TP +++      +G +  ++ + F 
Sbjct: 160 GARFLFYKNLGARLERALYNFMLDEHIKEGYQEIITPYMVNHDSMFGTGQYPKFKEDTFE 219

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---L 377
           +    DT      F L P         +   +   +ELP+        +R+E   +    
Sbjct: 220 LA---DT-----NFVLIPTAEVPLTNYYRGEILDGKELPIYFTAMSPSFRSEAGSAGRDT 271

Query: 378 HGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
            GL+R+  F + +   F   E+ + E  K+     +I +  G    ++ L T
Sbjct: 272 RGLIRLHQFHKVEMVKFAKPEESYQELEKMTANAENILQKLGLPYRVISLCT 323


>gi|332654244|ref|ZP_08419988.1| alanine--tRNA ligase [Ruminococcaceae bacterium D16]
 gi|332517330|gb|EGJ46935.1| alanine--tRNA ligase [Ruminococcaceae bacterium D16]
          Length = 890

 Score = 40.8 bits (94), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 33/132 (25%), Positives = 60/132 (45%), Gaps = 8/132 (6%)

Query: 68  RSLAVIR-HSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           R  AV+R HS  H++ +A++++  + V  A   + ED   +DF      +++ELA++   
Sbjct: 568 RRKAVMRAHSATHLLDKALRTVLGDHVHQAGSLVEEDRLRFDFTHFSALTAEELAKVSAM 627

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           + E +      L+ Y  H     + E+KK+       E       V    +G   + C G
Sbjct: 628 VNEAV------LEGYDIHTDVLPIEEAKKKGAIALFGEKYGDTVRVVDMGEGYSVEFCGG 681

Query: 186 PHVRSTGQVKKF 197
            H+ +T +V  F
Sbjct: 682 THLDNTAKVGVF 693


>gi|282890190|ref|ZP_06298720.1| hypothetical protein pah_c014o045 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281499847|gb|EFB42136.1| hypothetical protein pah_c014o045 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 876

 Score = 40.8 bits (94), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 30/129 (23%), Positives = 58/129 (44%), Gaps = 18/129 (13%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           H+  H++  A+  +  E     G ++E G   +DF   +P +  EL +IE  + + I  +
Sbjct: 566 HTATHLLHWALHHVLGEHVKQAGSVVEPGRLRFDFSHHKPLTKQELNEIENLVNQRIRLN 625

Query: 134 SPFLKQYLSHEKAR-----ELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
            P     +++E+A+     + F  +K   KV ++++  +KE            LC G H 
Sbjct: 626 LPVKTYEIAYEEAQKSTDIKQFFGEKYGAKVRVVDAEFSKE------------LCGGTHT 673

Query: 189 RSTGQVKKF 197
            + G +  F
Sbjct: 674 SALGNIGLF 682


>gi|302550143|ref|ZP_07302485.1| alanyl-tRNA synthetase [Streptomyces viridochromogenes DSM 40736]
 gi|302467761|gb|EFL30854.1| alanyl-tRNA synthetase [Streptomyces viridochromogenes DSM 40736]
          Length = 890

 Score = 40.8 bits (94), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 40/162 (24%), Positives = 70/162 (43%), Gaps = 15/162 (9%)

Query: 68  RSLAVIR-HSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSDELAQIEKK 125
           R  A+ R HS  H+  +A++          G   + G F +DF       +  +  +E+K
Sbjct: 565 RRTAIARAHSATHLTHQALRDALGPTAAQAGSENQPGRFRFDFGSPSAVPTAVMTDVEQK 624

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF-DLCR 184
           + E++ARD     + +       + E+KK+    E  E     E V +   G++  +LC 
Sbjct: 625 INEVLARDLDVQAEVMG------IDEAKKQGAIAEFGEKY--GERVRVVTIGDFSKELCG 676

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWN 226
           G HV +T Q      L+K+ G    G   R + + +   A+N
Sbjct: 677 GTHVHNTAQ----LGLVKLLGESSIGSGVRRIEALVGVDAYN 714


>gi|195625240|gb|ACG34450.1| seryl-tRNA synthetase [Zea mays]
          Length = 512

 Score = 40.8 bits (94), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 42/183 (22%), Positives = 82/183 (44%), Gaps = 19/183 (10%)

Query: 244 RDHRKLAREMDLFHI--AEDGSGVIFWHRKGWKIF--QTLISYMRRKI-KDDYEEINTPQ 298
           +DH +L +E+DLF    A + SG  F++ K   +     L+++   ++ K  +  + TP+
Sbjct: 207 KDHLQLGKELDLFDFDAAAEVSGSKFYYLKNEAVLLEMALVNWAISEVSKKGFTPLITPE 266

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++   + ++ G     RA    V   +D+ + L   A  P+       +    + +   L
Sbjct: 267 IVRSSVVEKCGFQP--RAKNTQVYSIEDSDQCLIGTAEIPVG-----GIHMDSILAESAL 319

Query: 359 PVRLAEFGSVYRNE---PSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           P++   +   +R E      +  GL RV  F++ +  +FC  E    E  K H  +I+I 
Sbjct: 320 PLKYVAYSHCFRTEAGAAGAATRGLYRVHQFSKVEMFIFCRPE----ESGKWHEELITIE 375

Query: 416 KDF 418
           +D 
Sbjct: 376 EDL 378


>gi|94989115|ref|YP_597216.1| seryl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
 gi|94993007|ref|YP_601106.1| seryl-tRNA synthetase [Streptococcus pyogenes MGAS2096]
 gi|166223295|sp|Q1JA99|SYS_STRPB RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|166223296|sp|Q1JKF1|SYS_STRPC RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|94542623|gb|ABF32672.1| seryl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
 gi|94546515|gb|ABF36562.1| Seryl-tRNA synthetase [Streptococcus pyogenes MGAS2096]
          Length = 425

 Score = 40.8 bits (94), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 36/172 (20%), Positives = 73/172 (42%), Gaps = 12/172 (6%)

Query: 262 GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           G+  +F+   G ++ + L ++M    IK+ Y+EI TP +++      +G +  ++ + F 
Sbjct: 160 GARFLFYKNLGARLERALYNFMLDEHIKEGYQEIITPYMVNHDSMFGTGQYPKFKEDTFE 219

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---L 377
           +    DT      F L P         +   +   +ELP+        +R+E   +    
Sbjct: 220 LA---DT-----NFVLIPTAEVPLTNYYRGEILDGKELPIYFTAMSPSFRSEAGSAGRDT 271

Query: 378 HGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
            GL+R+  F + +   F   E+ + E  K+     +I +  G    ++ L T
Sbjct: 272 RGLIRLHQFHKVEMVKFAKPEESYQELEKMTANAENILQKLGLPYRVISLCT 323


>gi|254425077|ref|ZP_05038795.1| alanyl-tRNA synthetase [Synechococcus sp. PCC 7335]
 gi|196192566|gb|EDX87530.1| alanyl-tRNA synthetase [Synechococcus sp. PCC 7335]
          Length = 887

 Score = 40.8 bits (94), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 63/141 (44%), Gaps = 13/141 (9%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKM 126
           R  A   H+  H++  A++S+  E     G +++ D   +DF   Q  + ++L Q+EK++
Sbjct: 565 RRRAQANHTATHLLQAALKSLVNESISQAGSLVDFDRLRFDFHCPQALTPEQLQQVEKQV 624

Query: 127 QEIIAR--DSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
              IA   D+      ++  KA+       E Y  E+         V  Y  G   +LC 
Sbjct: 625 NSWIAEAHDADVQTMPIAEAKAKGAVAMFGEKYGDEV--------RVIDY-PGVSMELCG 675

Query: 185 GPHVRSTGQVKKFFKLMKVAG 205
           G HV +T ++   FK++   G
Sbjct: 676 GTHVSNTAEI-GVFKIISETG 695


>gi|195587264|ref|XP_002083385.1| GD13380 [Drosophila simulans]
 gi|194195394|gb|EDX08970.1| GD13380 [Drosophila simulans]
          Length = 458

 Score = 40.8 bits (94), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 29/119 (24%), Positives = 54/119 (45%), Gaps = 7/119 (5%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF-NH 350
           ++I  P +    LW+++G  +   +  + V+      +  + F + P +     A+    
Sbjct: 74  QKITLPILTPTGLWKKTGRLEGDISEFYMVR-----DRSGKQFLMSPTHEEAVTAMLATT 128

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
              SYR+LP+RL + G  +R+E   +  GLMR + F   D + F   E+   E   + N
Sbjct: 129 SPISYRQLPLRLFQIGPKFRDELK-TRFGLMRAKEFLMKDMYTFDVSEESARETYSVVN 186


>gi|94994938|ref|YP_603036.1| seryl-tRNA synthetase [Streptococcus pyogenes MGAS10750]
 gi|166223298|sp|Q1J594|SYS_STRPF RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|94548446|gb|ABF38492.1| Seryl-tRNA synthetase [Streptococcus pyogenes MGAS10750]
          Length = 425

 Score = 40.8 bits (94), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 36/172 (20%), Positives = 73/172 (42%), Gaps = 12/172 (6%)

Query: 262 GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           G+  +F+   G ++ + L ++M    IK+ Y+EI TP +++      +G +  ++ + F 
Sbjct: 160 GARFLFYKNLGARLERALYNFMLDEHIKEGYQEIITPYMVNHDSMFGTGQYPKFKEDTFE 219

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---L 377
           +    DT      F L P         +   +   +ELP+        +R+E   +    
Sbjct: 220 LA---DT-----NFVLIPTAEVPLTNYYRGEILDGKELPIYFTAMSPSFRSEAGSAGRDT 271

Query: 378 HGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
            GL+R+  F + +   F   E+ + E  K+     +I +  G    ++ L T
Sbjct: 272 RGLIRLHQFHKVEMVKFAKPEESYQELEKMTANAENILQKLGLPYRVISLCT 323


>gi|282880930|ref|ZP_06289621.1| alanine--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
 gi|281305153|gb|EFA97222.1| alanine--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
          Length = 875

 Score = 40.8 bits (94), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 31/133 (23%), Positives = 57/133 (42%), Gaps = 8/133 (6%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D R      H+  H++  A++ +  + V+     +  D   +DF   Q  + +E+ Q+E+
Sbjct: 556 DKRDACAANHTATHLLDYALKQVLGDHVEQKGSYVSPDTLRFDFSHFQKVTDEEIRQVER 615

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
            + ++I +D P        E      E  KE   V +       + V + R G   + C 
Sbjct: 616 LVNDLIRQDIPL------DEHRDTPIEEAKEMGAVALFGE-KYGDKVRVVRFGPSCEFCG 668

Query: 185 GPHVRSTGQVKKF 197
           G H +STG++  F
Sbjct: 669 GIHAKSTGRIGLF 681


>gi|6707748|sp|Q9XDM3|SYA_AQUPY RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|4587716|gb|AAD25871.1|AF027500_1 alanyl-tRNA synthetase [Aquifex pyrophilus]
          Length = 871

 Score = 40.8 bits (94), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 32/134 (23%), Positives = 65/134 (48%), Gaps = 21/134 (15%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY-YDFDKEQPFSSDELAQIEKKMQEIIARD 133
           H+  H++  A++++  E     G ++ D +  +DF    P + +E+ +IE+ + E I  +
Sbjct: 559 HTATHLLHAALRNLLGEHVRQAGSLVADKYLRFDFTHFSPLTEEEIKRIEELVNEKIREN 618

Query: 134 SPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWF-DLCRGPH 187
            P     +++++A +     +FE K               E V +   GE+  +LC G H
Sbjct: 619 LPVSVMEMAYQEALQTGAIAIFEEK-------------YGERVRVISCGEFSKELCGGTH 665

Query: 188 VRSTGQVKKFFKLM 201
           V +TG +  +FK++
Sbjct: 666 VSATGDI-GYFKII 678


>gi|15924608|ref|NP_372142.1| alanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50]
 gi|15927198|ref|NP_374731.1| alanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus N315]
 gi|148268099|ref|YP_001247042.1| alanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|150394167|ref|YP_001316842.1| alanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|156979936|ref|YP_001442195.1| alanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
 gi|253316601|ref|ZP_04839814.1| alanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           CF-Marseille]
 gi|255006403|ref|ZP_05145004.2| alanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Mu50-omega]
 gi|257793693|ref|ZP_05642672.1| alanyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|258411008|ref|ZP_05681288.1| alanyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|258420190|ref|ZP_05683145.1| alanyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|258438192|ref|ZP_05689476.1| alanyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|258443655|ref|ZP_05691994.1| alanyl-tRNA synthetase [Staphylococcus aureus A8115]
 gi|258448776|ref|ZP_05696888.1| alanyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|258453595|ref|ZP_05701573.1| alanyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|269203244|ref|YP_003282513.1| alanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98]
 gi|282893121|ref|ZP_06301355.1| alanyl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|282928252|ref|ZP_06335857.1| alanyl-tRNA synthetase [Staphylococcus aureus A10102]
 gi|295406740|ref|ZP_06816545.1| alanyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|296276721|ref|ZP_06859228.1| alanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MR1]
 gi|297245678|ref|ZP_06929543.1| alanyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|54039649|sp|P67011|SYA_STAAN RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|54042024|sp|P67010|SYA_STAAM RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|205830214|sp|A7X328|SYA_STAA1 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|205830215|sp|A6U287|SYA_STAA2 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|205830216|sp|A5ITE3|SYA_STAA9 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|13701416|dbj|BAB42710.1| alanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus N315]
 gi|14247389|dbj|BAB57780.1| alanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50]
 gi|147741168|gb|ABQ49466.1| alanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|149946619|gb|ABR52555.1| alanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|156722071|dbj|BAF78488.1| alanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
 gi|257787665|gb|EEV26005.1| alanyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|257840158|gb|EEV64622.1| alanyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|257843901|gb|EEV68295.1| alanyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|257848236|gb|EEV72227.1| alanyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|257851061|gb|EEV75004.1| alanyl-tRNA synthetase [Staphylococcus aureus A8115]
 gi|257858054|gb|EEV80943.1| alanyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|257864326|gb|EEV87076.1| alanyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|262075534|gb|ACY11507.1| alanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98]
 gi|282590059|gb|EFB95141.1| alanyl-tRNA synthetase [Staphylococcus aureus A10102]
 gi|282764439|gb|EFC04565.1| alanyl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|285817300|gb|ADC37787.1| Alanyl-tRNA synthetase [Staphylococcus aureus 04-02981]
 gi|294968487|gb|EFG44511.1| alanyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|297177329|gb|EFH36581.1| alanyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|312830005|emb|CBX34847.1| alanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ECT-R
           2]
 gi|315129899|gb|EFT85889.1| alanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS03]
 gi|329727520|gb|EGG63976.1| alanine--tRNA ligase [Staphylococcus aureus subsp. aureus 21172]
          Length = 876

 Score = 40.8 bits (94), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 17/137 (12%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++  A++S+  +     G ++E D   +DF    P ++DE+ Q+E+ + E I + 
Sbjct: 565 HSATHLLHAALKSVLGDHVNQAGSLVEADRLRFDFSHFGPMTNDEIDQVERLVNEEIWKG 624

Query: 134 SPFLKQYLSHEKAREL----FESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
                Q +    A+E+       +K    V ++   P              +LC G HVR
Sbjct: 625 IDVNIQEMDIASAKEMGAMALFGEKYGDVVRVVNMAPFS-----------IELCGGIHVR 673

Query: 190 STGQVKKFFKLMKVAGA 206
           +T ++   FK++  +G 
Sbjct: 674 NTSEI-GLFKIVSESGT 689


>gi|331703337|ref|YP_004400024.1| Proline tRNA ligase [Mycoplasma mycoides subsp. capri LC str.
           95010]
 gi|328801892|emb|CBW54045.1| Proline tRNA ligase [Mycoplasma mycoides subsp. capri LC str.
           95010]
          Length = 474

 Score = 40.8 bits (94), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 77/376 (20%), Positives = 152/376 (40%), Gaps = 68/376 (18%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAV 321
           G + +   G++I++ +  Y+  + K  + + +  P ++ + L+ ++  H + +   +  V
Sbjct: 36  GTMIFRPYGYRIWELIQKYLDEEFKKINVDNVYFPLLIPESLFNKEKDHIEGFSPEIATV 95

Query: 322 -KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            K  +  +++     ++P +    +  F++ + SYR+LP+   ++ +V R E +      
Sbjct: 96  TKVGEKQLEE--NLFIRPTSEVVMMDYFSNEINSYRDLPLIYNQWCNVMRWEKTT--RPF 151

Query: 381 MRVRGFTQDDAHVFCTKEQMFNE----CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
           +R   F   + H   T    +NE    CLKI N    IY+ F  E +++           
Sbjct: 152 LRTSEFLWQEGH---TVHSSYNEAEDFCLKILN----IYEKFAKEILLLP---------- 194

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAI--GRDWQCG 494
                                     +  G    +  F G K  Y ++  +  G+  QCG
Sbjct: 195 --------------------------VICGKKTEKEKFAGAKDTYTIESLMFDGQALQCG 228

Query: 495 TIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLW 549
           T      N    ++  + N  ++  H    +   +G   R IG +I     +    LP  
Sbjct: 229 TSHFFADNFTKVYDIKFQNKENKLEHA---YSTSWGVSTRLIGALIMTHSDDNGLVLPSK 285

Query: 550 LSPIQAIVTTITSSAVEYAQEIANLLKSH--HLSIETDFRNETINYKIREHSIKKIPIII 607
           +SPIQ  +  I ++  E   ++  ++K       I+ D  +++  +KI E  IK IPI I
Sbjct: 286 ISPIQIQIIQIKNT--EQIDQVVEIIKDKLSDYRIDVDNSDKSFGFKISEAEIKGIPIRI 343

Query: 608 ICGDKEASERSIGIRR 623
             G ++     I I R
Sbjct: 344 EIGPRDLENNQITISR 359


>gi|329121068|ref|ZP_08249699.1| alanine--tRNA ligase [Dialister micraerophilus DSM 19965]
 gi|327471230|gb|EGF16684.1| alanine--tRNA ligase [Dialister micraerophilus DSM 19965]
          Length = 885

 Score = 40.8 bits (94), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 45/202 (22%), Positives = 77/202 (38%), Gaps = 31/202 (15%)

Query: 14  IKNFPVHATGSDVAESISRSLAKKAVAVAINGK-----VCDLSDPVREGSI------EII 62
           +KN P HA G      I        V    N K     +  L   + EG I      E+ 
Sbjct: 500 LKNNPFHAEGGGQMGDIGILRNSSGVFEVHNTKKLPDGIVYLIGTITEGKISVNDIVEVK 559

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQ 121
                R+     H+  H++  A++ +  +     G ++  D   +DF   +P ++ ++  
Sbjct: 560 VDRVRRAALAKNHTGTHLLHAALRQVLGKQATQAGSLVAPDHLRFDFTWNEPLTAKQIND 619

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQ 176
           +EK + E I        + +  E+AR+     LF  K                 V + R 
Sbjct: 620 VEKLVNEKILESLTLTTKEVPLEEARKAGALALFGEKYGKI-------------VRMVRI 666

Query: 177 GEW-FDLCRGPHVRSTGQVKKF 197
           G++  +LC G H  +TG+V  F
Sbjct: 667 GDFSLELCGGSHTHTTGEVGSF 688


>gi|188996094|ref|YP_001930345.1| alanyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
 gi|205830234|sp|B2V709|SYA_SULSY RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|188931161|gb|ACD65791.1| alanyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 876

 Score = 40.8 bits (94), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 40/164 (24%), Positives = 79/164 (48%), Gaps = 23/164 (14%)

Query: 45  GKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCA-HIMAEAVQSIWPEVQVAIGPIIEDG 103
           GKV  L   V+EG+      +  R   ++RH  A H++  A++++  +     G ++ D 
Sbjct: 539 GKV--LFGSVKEGAYVRAKTDKERRENIMRHHTATHLLHAALRNVLGDHVKQAGSLVSDE 596

Query: 104 FY-YDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAY 157
           +  +DF   +  + +EL  +E+ +   I ++   + Q + +E+A +     +FE K  A 
Sbjct: 597 YLRFDFTHFESMTDEELKAVEELVNREIMKNEEVVCQEMQYEEALKSGAMAIFEEKY-AD 655

Query: 158 KVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLM 201
            V ++ +  +KE            LC G HV+ TG +  +FK++
Sbjct: 656 VVRVISAGISKE------------LCGGTHVKRTGDI-GYFKIL 686


>gi|302423350|ref|XP_003009505.1| bifunctional aminoacyl-tRNA synthetase [Verticillium albo-atrum
           VaMs.102]
 gi|261352651|gb|EEY15079.1| bifunctional aminoacyl-tRNA synthetase [Verticillium albo-atrum
           VaMs.102]
          Length = 535

 Score = 40.8 bits (94), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 6/148 (4%)

Query: 292 EEINTPQVLD-QHLWQQSGHWDSYRANMFAVKCADDTIKDLRT-FALKPMNCPGHVAVFN 349
           EE + P  L  + L ++  H + +   +  V  A D  KDL    A++P +       ++
Sbjct: 128 EETSFPIFLSSKSLEKEKDHVEGFAPELAWVTKAGD--KDLEVPVAVRPTSEAVMYPYYS 185

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIH 408
             ++S+R+LP+RL ++ SV R E   +    +R R F   + H    T+E    E L+I 
Sbjct: 186 KWIRSHRDLPLRLNQWNSVVRWEAKQTTP-FLRTREFLWQEGHTAHLTEELAGKEVLEIL 244

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVG 436
            L   +Y+      ++    T  EK  G
Sbjct: 245 ELYAGVYEQLLAVPVVRGTKTENEKFAG 272


>gi|251788614|ref|YP_003003335.1| alanyl-tRNA synthetase [Dickeya zeae Ech1591]
 gi|247537235|gb|ACT05856.1| alanyl-tRNA synthetase [Dickeya zeae Ech1591]
          Length = 875

 Score = 40.8 bits (94), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 28/127 (22%), Positives = 54/127 (42%), Gaps = 10/127 (7%)

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY-YDFDKEQPFSSDELAQIEKKMQEIIA 131
           + HS  H++  A++ +  +     G ++ D +  +DF   +    +++ Q+E  +   I 
Sbjct: 562 LNHSATHLLHAALRQVLGDHVAQKGSLVNDNYLRFDFSHPEAMKPEQIRQVEDIVNTQIR 621

Query: 132 RDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRS 190
           R+ P     ++ + AR        A     L      E V +   G++  +LC G H R 
Sbjct: 622 RNLPVDTDVMALDAAR--------AKGAMALFGEKYDEQVRVLSMGDFSIELCGGTHARR 673

Query: 191 TGQVKKF 197
           TG +  F
Sbjct: 674 TGDIGLF 680


>gi|255654577|ref|ZP_05399986.1| putative phosphoribulokinase/uridine kinase [Clostridium difficile
           QCD-23m63]
 gi|296449351|ref|ZP_06891133.1| phosphoribulokinase [Clostridium difficile NAP08]
 gi|296880715|ref|ZP_06904667.1| phosphoribulokinase [Clostridium difficile NAP07]
 gi|296261821|gb|EFH08634.1| phosphoribulokinase [Clostridium difficile NAP08]
 gi|296428288|gb|EFH14183.1| phosphoribulokinase [Clostridium difficile NAP07]
          Length = 555

 Score = 40.8 bits (94), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 41/193 (21%), Positives = 82/193 (42%), Gaps = 14/193 (7%)

Query: 78  AHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFL 137
           + I   A + I+ + +V I   + DG Y +   ++     ++  I+ KM+EI+  D    
Sbjct: 82  SFIFVMACREIFWDSRVTIEHSLSDGLYCEVHIDRKLKEVDVENIKNKMKEIVNNDYVIE 141

Query: 138 KQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
           K  ++  +A  +FE+ +   K E+L+     ++  +Y+   + D   G  + STG +K F
Sbjct: 142 KIEVTRNEAISIFENNEMYEKAELLK-YKEYDSAKVYKCRNYIDHFYGYMLPSTGYIKSF 200

Query: 198 FKLMKVAGAYWRGDSN-----------RPMLSRIYGTA--WNTQQELTQYLYFLEESEKR 244
              +   G    G S            +P LS +Y  A  W+    + + +   +  E  
Sbjct: 201 DIKLYNGGVIILGPSEEDKTLPMKFVPQPKLSSVYYEAEEWSRLMGIDKVVSLNKIIENN 260

Query: 245 DHRKLAREMDLFH 257
           ++  + R  +  H
Sbjct: 261 EYGDIIRTFEALH 273


>gi|212693638|ref|ZP_03301766.1| hypothetical protein BACDOR_03157 [Bacteroides dorei DSM 17855]
 gi|237724236|ref|ZP_04554717.1| alanyl-tRNA synthetase [Bacteroides sp. D4]
 gi|265755936|ref|ZP_06090403.1| alanyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
 gi|212663891|gb|EEB24465.1| hypothetical protein BACDOR_03157 [Bacteroides dorei DSM 17855]
 gi|229437424|gb|EEO47501.1| alanyl-tRNA synthetase [Bacteroides dorei 5_1_36/D4]
 gi|263234014|gb|EEZ19615.1| alanyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
          Length = 872

 Score = 40.8 bits (94), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 60/134 (44%), Gaps = 16/134 (11%)

Query: 66  DPRSLAVIRHSCAHIMAEAV-QSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           + R+     HSC H++ EA+ Q +   V+     +  +   +DF   Q  + ++L ++E 
Sbjct: 554 EKRAACAANHSCTHLLDEALRQVLGTHVEQKGSLVTPESLRFDFSHFQKVTDEQLREVEH 613

Query: 125 KMQEIIARDSPFLKQY--LSHEKARELFESK--KEAYKVEILESIPAKENVTLYRQGEWF 180
            +   I  + P L +Y  L  EKA+EL       E Y  E          V + + G   
Sbjct: 614 LVNAKIRENIP-LTEYRNLPIEKAKELGAIALFGEKYGDE----------VRVVQFGNSI 662

Query: 181 DLCRGPHVRSTGQV 194
           + C G HV +TG++
Sbjct: 663 EFCGGTHVSATGKI 676


>gi|56807927|ref|ZP_00365750.1| COG0172: Seryl-tRNA synthetase [Streptococcus pyogenes M49 591]
 gi|209559859|ref|YP_002286331.1| seryl-tRNA synthetase [Streptococcus pyogenes NZ131]
 gi|238065107|sp|B5XHX4|SYS_STRPZ RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|209541060|gb|ACI61636.1| Seryl-tRNA synthetase [Streptococcus pyogenes NZ131]
          Length = 425

 Score = 40.8 bits (94), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 36/172 (20%), Positives = 73/172 (42%), Gaps = 12/172 (6%)

Query: 262 GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           G+  +F+   G ++ + L ++M    IK+ Y+EI TP +++      +G +  ++ + F 
Sbjct: 160 GARFLFYKNLGARLERALYNFMLDEHIKEGYQEIITPYMVNHDSMFGTGQYPKFKEDTFE 219

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---L 377
           +    DT      F L P         +   +   +ELP+        +R+E   +    
Sbjct: 220 LA---DT-----NFVLIPTAEVPLTNYYRGEILDGKELPIYFTAMSPSFRSEAGSAGRDT 271

Query: 378 HGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
            GL+R+  F + +   F   E+ + E  K+     +I +  G    ++ L T
Sbjct: 272 RGLIRLHQFHKVEMVKFAKPEESYQELEKMTANAENILQKLGLPYRVISLCT 323


>gi|329114349|ref|ZP_08243111.1| Alanyl-tRNA synthetase [Acetobacter pomorum DM001]
 gi|326696425|gb|EGE48104.1| Alanyl-tRNA synthetase [Acetobacter pomorum DM001]
          Length = 898

 Score = 40.8 bits (94), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 43/184 (23%), Positives = 79/184 (42%), Gaps = 16/184 (8%)

Query: 22  TGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIRHSCAHI 80
           T S V  +I+ +  K    +   G V + +  +R G ++      D RS     HS  H+
Sbjct: 529 TASGVKVAITDTQKKAGDLIVHYGTVTEGT--LRPGMAVTATVDHDRRSAIRAHHSATHL 586

Query: 81  MAEAVQSIWPEVQVAIGPI-IEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQ 139
           + EA++          G +   +   +D  + +P + +ELA IE ++   I  +S  + +
Sbjct: 587 LHEALRRHLGAHVAQKGSLNTAERLRFDVSQPRPITDEELAAIEAEVNNRIRENSQVVTR 646

Query: 140 YLS-----HEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQ 193
            ++      E A  LF  +K   +V ++      +N     +  W  +LC G HV  TG 
Sbjct: 647 SMTPDEAIAEGATALF-GEKYGDEVRVVSMGAGADN-----KAPWSMELCGGTHVNRTGD 700

Query: 194 VKKF 197
           + +F
Sbjct: 701 IGQF 704


>gi|326569365|gb|EGE19425.1| alanyl-tRNA synthetase [Moraxella catarrhalis BC8]
          Length = 893

 Score = 40.8 bits (94), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 34/145 (23%), Positives = 66/145 (45%), Gaps = 14/145 (9%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKM 126
           R+ +   HS  H++  A+++I  +     G ++  D   +DF  ++P +   ++QIE  +
Sbjct: 563 RASSAKNHSATHLLHAALRTILGDGVSQKGSMVSSDLLRFDFSYDKPLTEQNISQIETMV 622

Query: 127 QEIIARDSPFLKQYLSHEKARE----LFESKKEAYKVEILESIPAKENVTLYRQGEWF-- 180
            + I  ++P   + L  + A+     +   +K    V +L         T  + G+ F  
Sbjct: 623 NQQILANTPAHVEILDIDSAKNKGAMMLFGEKYGDTVRVLSM------GTTDKDGKPFSI 676

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAG 205
           +LC G HV  TG +   FK++   G
Sbjct: 677 ELCGGLHVTRTGDI-GLFKIVSEQG 700


>gi|194749304|ref|XP_001957079.1| GF10245 [Drosophila ananassae]
 gi|190624361|gb|EDV39885.1| GF10245 [Drosophila ananassae]
          Length = 458

 Score = 40.8 bits (94), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 29/113 (25%), Positives = 53/113 (46%), Gaps = 7/113 (6%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF-NH 350
           ++I+ P +    LW+++G  +   +  + V+      +  + F + P +     A+    
Sbjct: 74  QKISLPILTPSALWKKTGRLEGDISEFYMVR-----DRSGKQFLMSPTHEEAITAMLATT 128

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE 403
              SYR+LP+RL + G  +R+E   S  GLMR + F   D + F   E+   E
Sbjct: 129 SPISYRQLPLRLYQIGPKFRDELK-SRFGLMRAKEFLMKDMYSFDVSEETARE 180


>gi|57233592|ref|YP_180805.1| alanyl-tRNA synthetase [Dehalococcoides ethenogenes 195]
 gi|83305845|sp|Q3ZAE4|SYA_DEHE1 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|57224040|gb|AAW39097.1| alanyl-tRNA synthetase [Dehalococcoides ethenogenes 195]
          Length = 871

 Score = 40.8 bits (94), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 53/216 (24%), Positives = 94/216 (43%), Gaps = 23/216 (10%)

Query: 44  NGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIED 102
            G+V      + E +   I  E  R +A   H+  HI+  A++ +  E VQ     +  +
Sbjct: 531 QGRVISGCLKIAETAAAHIDEERRRDIAR-NHTATHILQTALRQVLGEQVQQRGSVVTPE 589

Query: 103 GFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAY 157
              +DF   +P + DE+ + E+ + + I R+ P   + + +  A E     LF  +K   
Sbjct: 590 RLRFDFSHLKPMTKDEIRRAEEFVNDKIRRNLPVYAEEMPYRHALEEGVTALF-GEKYGD 648

Query: 158 KVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVA--GAYWRGDSNRP 215
           +V +L          + R     +LC G HV ++G++   FK++  +  GA  R      
Sbjct: 649 RVRVLR---------VGRPAVSAELCGGTHVSASGEI-SLFKIVSESSVGAGLR--RIEA 696

Query: 216 MLSRIYGTAWNTQQE-LTQYLYFLEESEKRDHRKLA 250
           +  R      N QQ+ L++    LE + +   RKLA
Sbjct: 697 VTGREAEAYINLQQDSLSELSGMLEAAPEESPRKLA 732


>gi|114775361|ref|ZP_01450929.1| alanyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1]
 gi|114553472|gb|EAU55853.1| alanyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1]
          Length = 871

 Score = 40.4 bits (93), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 35/143 (24%), Positives = 62/143 (43%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIR-HSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPF 114
           GS+     ++ R  A+ R H+  H+M   ++ +  E V+ A   + E    +DF+  +P 
Sbjct: 546 GSVVHFAVDEDRRAAIRRNHTATHLMHAVLRKVLGEHVKQAGSLVNEQRLRFDFNHFKPV 605

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
           S +E   IE ++   I  + P   + +S ++A         A     L      + V + 
Sbjct: 606 SEEERKVIEAEVNAAIWANDPVETKLMSQDEAV--------ASGAMALFGEKYGDEVRVV 657

Query: 175 RQGEWFDLCRGPHVRSTGQVKKF 197
             G   +LC G HV +TG +  F
Sbjct: 658 SAGFSTELCGGTHVSATGDIGPF 680


>gi|78044932|ref|YP_359396.1| alanyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901]
 gi|123576855|sp|Q3AEN8|SYA_CARHZ RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|77997047|gb|ABB15946.1| alanyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901]
          Length = 874

 Score = 40.4 bits (93), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 42/161 (26%), Positives = 74/161 (45%), Gaps = 27/161 (16%)

Query: 54  VREGSIEI------ITPEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYY 106
           V EGS+++      +  E  R      H+  H++ +A++ +  E V  A   +  +   +
Sbjct: 537 VVEGSVKVGDKATLMVDETTRMSTARNHTATHLLHKALKMVLGEHVNQAGSLVTPERLRF 596

Query: 107 DFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEI 161
           DF   +  S ++L +IE  + E I R+      Y + ++AR+     LF+ K        
Sbjct: 597 DFTHFEGVSDEDLRKIENIVNEAILRNLLVQIDYTTLDEARKAGVIALFDEK-------- 648

Query: 162 LESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKFFKLM 201
                  + V + + GE+  +LC G HV STG V  FFK++
Sbjct: 649 -----YGDLVRVVKIGEFSAELCGGTHVSSTG-VIGFFKIL 683


>gi|239996387|ref|ZP_04716911.1| alanyl-tRNA synthetase [Alteromonas macleodii ATCC 27126]
          Length = 865

 Score = 40.4 bits (93), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 63/135 (46%), Gaps = 15/135 (11%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIED-GFYYDFDKEQPFSSDELAQIEKKM-QEIIAR 132
           HS  H++  A++ I  E     G ++E     +DF   +  ++++LA+IE+++ QEI A 
Sbjct: 554 HSATHLLHAALREILGEHVTQKGSLVEAPRMRFDFSHFEAVTAEQLAEIERRVNQEIRA- 612

Query: 133 DSPFLKQYLSHEKARELFE-SKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRS 190
                    +H  A EL +  + +A     L      E V +   G +  +LC G HV  
Sbjct: 613 ---------NHTLATELMDLDEAKASGAMALFGEKYDEKVRVVTMGPFSVELCGGTHVTR 663

Query: 191 TGQVKKFFKLMKVAG 205
           TG +   FK+   AG
Sbjct: 664 TGDI-GLFKITSEAG 677


>gi|71904134|ref|YP_280937.1| seryl-tRNA synthetase [Streptococcus pyogenes MGAS6180]
 gi|123639382|sp|Q48RS8|SYS_STRPM RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|71803229|gb|AAX72582.1| seryl-tRNA synthetase [Streptococcus pyogenes MGAS6180]
          Length = 425

 Score = 40.4 bits (93), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 36/172 (20%), Positives = 73/172 (42%), Gaps = 12/172 (6%)

Query: 262 GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           G+  +F+   G ++ + L ++M    IK+ Y+EI TP +++      +G +  ++ + F 
Sbjct: 160 GARFLFYKNLGARLERALYNFMLDEHIKEGYQEIITPYMVNHDSMFGTGQYPKFKEDTFE 219

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---L 377
           +    DT      F L P         +   +   +ELP+        +R+E   +    
Sbjct: 220 LA---DT-----NFVLIPTAEVPLTNYYRGEILDGKELPIYFTAMSPSFRSEAGSAGRDT 271

Query: 378 HGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
            GL+R+  F + +   F   E+ + E  K+     +I +  G    ++ L T
Sbjct: 272 RGLIRLHQFHKVEMVKFAKPEESYQELEKMTANAENILQKLGLPYRVISLCT 323


>gi|331083851|ref|ZP_08332960.1| alanyl-tRNA synthetase 1 [Lachnospiraceae bacterium 6_1_63FAA]
 gi|330403276|gb|EGG82836.1| alanyl-tRNA synthetase 1 [Lachnospiraceae bacterium 6_1_63FAA]
          Length = 879

 Score = 40.4 bits (93), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 32/130 (24%), Positives = 62/130 (47%), Gaps = 20/130 (15%)

Query: 75  HSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++ +A++++    V+     +  D   +DF   Q  +++ELA++E+ + + I   
Sbjct: 566 HSATHLLQKALKTVLGSHVEQKGSLVTPDRLRFDFAHFQSMTAEELAKVEEIVNKEIQAA 625

Query: 134 SPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWF-DLCRGPH 187
            P + + +S E+A++     LF  K               E V +   G++  +LC G H
Sbjct: 626 LPVVTEVMSIEEAKKAGAMALFGEK-------------YGEEVRVVSMGDFSKELCGGTH 672

Query: 188 VRSTGQVKKF 197
           V +TG +  F
Sbjct: 673 VSNTGVITTF 682


>gi|197119579|ref|YP_002140006.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA [Geobacter
           bemidjiensis Bem]
 gi|197088939|gb|ACH40210.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA [Geobacter
           bemidjiensis Bem]
          Length = 716

 Score = 40.4 bits (93), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 1/63 (1%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI-E 60
           P D+ +  P G +K FP  +T  D A S+   +  + V   +NGK+  L   ++ G I E
Sbjct: 384 PEDVFIFTPKGDVKGFPKGSTPIDFAYSVHTDVGHRCVGAKVNGKLVPLKYELKTGDIVE 443

Query: 61  IIT 63
           +IT
Sbjct: 444 VIT 446


>gi|146321099|ref|YP_001200810.1| alanyl-tRNA synthetase [Streptococcus suis 98HAH33]
 gi|145691905|gb|ABP92410.1| Alanyl-tRNA synthetase [Streptococcus suis 98HAH33]
          Length = 830

 Score = 40.4 bits (93), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 87/197 (44%), Gaps = 26/197 (13%)

Query: 17  FPVHATGSDVAESISRSLAKKAVAVAINGK---VCDLSDPVREGSIEIITPEDPRSLAVI 73
           F  +ATG  VA  I        V  A NG+     +LS  +  G    +  E  R   V 
Sbjct: 512 FVKNATGDIVATVID-------VQKAPNGQPLHTVELSASISVGQTYTLEIETKRRKGVE 564

Query: 74  R-HSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY-YDFDKEQPFSSDELAQIEKKMQEIIA 131
           + H+  H++  A+ +I  E     G + E  F  +DF   +  +++EL +IE+++ E I 
Sbjct: 565 KNHTATHLLHAALHNIIGEHATQAGSLNEQDFLRFDFTHFEAVTAEELRRIEEEVNEQIW 624

Query: 132 RDSPFLKQYLSHEKARELFESK--KEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHV 188
              P +      + A+E+       E Y  E+         VT+   G++  +LC G HV
Sbjct: 625 NAIPVVTVETDIDTAKEMGAMALFGEKYGKEV-------RVVTI---GDYSVELCGGTHV 674

Query: 189 RSTGQVKKFFKLMKVAG 205
            +T ++   FK++K  G
Sbjct: 675 GNTAEI-GIFKILKEEG 690


>gi|332880215|ref|ZP_08447896.1| threonine/alanine tRNA ligase second additional domain protein
           [Capnocytophaga sp. oral taxon 329 str. F0087]
 gi|332681864|gb|EGJ54780.1| threonine/alanine tRNA ligase second additional domain protein
           [Capnocytophaga sp. oral taxon 329 str. F0087]
          Length = 160

 Score = 40.4 bits (93), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 30/127 (23%), Positives = 60/127 (47%), Gaps = 15/127 (11%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDS 134
           H+C HI+ + +  ++   +     I       ++D     + +++A+I +K+ E+IA D 
Sbjct: 21  HTCEHILNQTMVRMFGCERSRNAHIERKKSKINYDLADEPTEEQIAEIARKVNEVIAADL 80

Query: 135 PFLKQYLSHEKARELFESKKEAYKVEILESIP--AKENVTLYRQGEWFDLCR--GPHVRS 190
           P    Y+S +   +             L+ +P  A++ + L R G+ +D+C   G HV  
Sbjct: 81  PVTYAYVSRDAVPDNVP----------LDKLPDAAEDTLRLVRVGD-YDVCACIGAHVEH 129

Query: 191 TGQVKKF 197
           T Q+ +F
Sbjct: 130 TAQIGRF 136


>gi|322412582|gb|EFY03490.1| seryl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           dysgalactiae ATCC 27957]
          Length = 425

 Score = 40.4 bits (93), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 36/172 (20%), Positives = 73/172 (42%), Gaps = 12/172 (6%)

Query: 262 GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           G+  +F+   G ++ + L ++M    IK+ Y+EI TP +++      +G +  ++ + F 
Sbjct: 160 GARFLFYKNLGARLERALYNFMLDEHIKEGYQEIITPYMVNHDSMFGTGQYPKFKEDTFE 219

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---L 377
           +    DT      F L P         +   +   +ELP+        +R+E   +    
Sbjct: 220 LS---DT-----NFVLIPTAEVPLTNYYRGEILDGKELPIYFTAMSPSFRSEAGSAGRDT 271

Query: 378 HGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
            GL+R+  F + +   F   E+ + E  K+     +I +  G    ++ L T
Sbjct: 272 RGLIRLHQFHKVEMVKFAKPEKSYQELEKMTANAENILQKLGLPYRVIALCT 323


>gi|116749542|ref|YP_846229.1| (p)ppGpp synthetase I SpoT/RelA [Syntrophobacter fumaroxidans MPOB]
 gi|116698606|gb|ABK17794.1| (p)ppGpp synthetase I, SpoT/RelA [Syntrophobacter fumaroxidans
           MPOB]
          Length = 716

 Score = 40.4 bits (93), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 1/68 (1%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIE 60
           P ++ +  P G IK+FP  +T  D A  +   +  + V   +NGK+  L   ++ G +IE
Sbjct: 386 PDEVYVFTPQGEIKSFPRGSTPVDFAYEVHTEVGHRCVGARVNGKLVQLRYELQTGDTIE 445

Query: 61  IITPEDPR 68
           I+T  + R
Sbjct: 446 ILTAANHR 453


>gi|291536627|emb|CBL09739.1| Uridine kinase [Roseburia intestinalis M50/1]
          Length = 556

 Score = 40.4 bits (93), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 40/189 (21%), Positives = 76/189 (40%), Gaps = 7/189 (3%)

Query: 15  KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVI 73
           K +P   +   +A+          V    N ++ +L   V+ +G +  +T  D       
Sbjct: 15  KTYPAGVSFLSIAQEYQDQYEDDIVLALYNNRLRELKKTVKKDGELSFLTTSDKTGKRAY 74

Query: 74  RHSCAHIMAEAVQSIW--PEVQVAIGPIIEDGFYYDFDKEQ---PFSSDELAQIEKKMQE 128
           R S   +M +AV ++W    + V +   I  G+Y +  K+      +   +  ++K+M  
Sbjct: 75  RRSVTLLMQKAVYNLWGREHIGVYVRYAIGQGYYCELMKDGESCKITETMIGALKKEMYR 134

Query: 129 IIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           ++  D P  K  ++ ++A  LF       K E L        V +Y    + D   G  V
Sbjct: 135 LVMADLPIEKYSMNTDEAVALFHELGMKDK-EKLFRYRRSSRVNIYELDHYKDYFYGFMV 193

Query: 189 RSTGQVKKF 197
            STG ++ +
Sbjct: 194 PSTGYLRYY 202


>gi|242310739|ref|ZP_04809894.1| alanyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489]
 gi|239523137|gb|EEQ63003.1| alanyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489]
          Length = 859

 Score = 40.4 bits (93), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 29/125 (23%), Positives = 56/125 (44%), Gaps = 9/125 (7%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++ +A++ +  E     G ++E     +DF   +  S +E+ +IE  + E I   
Sbjct: 568 HSATHLLHKALREVLGEHIAQAGSLVESNRLRFDFSHPKALSYEEIEKIEILVNEKICLS 627

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQ 193
           +P + + +  + A+        A     L      +NV +   G+  +LC G HV +T  
Sbjct: 628 NPQICETMDIDSAK--------AKGAMALFGEKYGKNVRVITFGDSIELCGGIHVENTAN 679

Query: 194 VKKFF 198
           +  F+
Sbjct: 680 IGSFY 684


>gi|255940600|ref|XP_002561069.1| Pc16g07440 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211585692|emb|CAP93414.1| Pc16g07440 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 630

 Score = 40.4 bits (93), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 52/117 (44%), Gaps = 10/117 (8%)

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           Q LW+QSG   +  + +F       T      F L P +      +  H   SY+ LP+R
Sbjct: 113 QELWKQSGRL-TDGSELFRFNDRKGT-----PFLLAPTHEEEITTLVGHLTTSYKSLPLR 166

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           + +    YR+E +    GL+R R F   D + F   +   +E LK ++ + S Y + 
Sbjct: 167 VYQISRKYRDE-ARPRQGLLRGREFIMKDLYTF---DYSVDEALKTYDAVKSAYTEL 219


>gi|195336930|ref|XP_002035086.1| GM14112 [Drosophila sechellia]
 gi|194128179|gb|EDW50222.1| GM14112 [Drosophila sechellia]
          Length = 458

 Score = 40.4 bits (93), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 72/166 (43%), Gaps = 12/166 (7%)

Query: 247 RKLAREMDLFHIAEDGSGVIF--WHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHL 304
           +KL  E+ L     +G+  I     R   K    + S M++      ++I  P +    L
Sbjct: 30  QKLLTELGLVKSGSNGTYQIMPMAQRSVDKFINLVQSNMQQA---GGQKITLPILTPTGL 86

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF-NHGLKSYRELPVRLA 363
           W+++G  +   +  + V+  D + K    F + P +     A+       SYR+LP+RL 
Sbjct: 87  WKKTGRLEGDISEFYMVR--DRSGKQ---FLMSPTHEEAVTAMLATTSPISYRQLPLRLF 141

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
           + G  +R+E   +  GLMR + F   D + F   E+   E   + N
Sbjct: 142 QIGPKFRDELK-TRFGLMRAKEFLMKDMYSFDVSEETARETYSVVN 186


>gi|319892672|ref|YP_004149547.1| Alanyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03]
 gi|317162368|gb|ADV05911.1| Alanyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03]
          Length = 876

 Score = 40.4 bits (93), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 39/159 (24%), Positives = 71/159 (44%), Gaps = 20/159 (12%)

Query: 54  VREGSIEIITPEDPRSLAVIR-HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKE 111
           VRE +    T +     A+++ HS  H++  A++ +  E     G +++ D   +DF   
Sbjct: 543 VREAAEVTATIDRQARTAIMKNHSATHLLHAALKKVLGEHVNQAGSLVDSDRLRFDFSHI 602

Query: 112 QPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKAR-----ELFESKKEAYKVEILESIP 166
            P ++ E+ Q+E+ + E I    P   Q ++ E A+      LF  +K    V ++   P
Sbjct: 603 APMTAKEMKQVEQMVNEEIWNSIPVEIQEMNIEDAKAKGAMALF-GEKYGDIVRVVNMQP 661

Query: 167 AKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAG 205
                         +LC G HVR+T ++   FK+   +G
Sbjct: 662 FS-----------IELCGGTHVRNTSEI-GLFKITSESG 688


>gi|158320695|ref|YP_001513202.1| alanyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
 gi|205829976|sp|A8MGI3|SYA_ALKOO RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|158140894|gb|ABW19206.1| alanyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
          Length = 880

 Score = 40.4 bits (93), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 41/163 (25%), Positives = 73/163 (44%), Gaps = 20/163 (12%)

Query: 54  VREGSIEIITPEDPRSLAVIR------HSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYY 106
           V EG+I+I      +   V R      H+  H++ +A++ I  E V  A   +  D   +
Sbjct: 539 VEEGTIKIGDEVKAKVDMVTRMSTARNHTATHLLHKALRDIVGEHVHQAGSLVTPDRLRF 598

Query: 107 DFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKV--EILES 164
           DF   +  + D++ QIE+K+ +          Q L     R    S ++A K+  + L  
Sbjct: 599 DFTHFEGLTKDQITQIEEKVNQ----------QILMALDVRTFETSIEDAKKIGAQALFG 648

Query: 165 IPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKFFKLMKVAGA 206
               + V + + GE+  +LC G HV ++G++  F  L +   A
Sbjct: 649 EKYGDVVRVVKVGEYSTELCGGTHVTNSGEIGMFIMLSEAGVA 691


>gi|323127929|gb|ADX25226.1| seryl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis ATCC 12394]
          Length = 425

 Score = 40.4 bits (93), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 36/172 (20%), Positives = 73/172 (42%), Gaps = 12/172 (6%)

Query: 262 GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           G+  +F+   G ++ + L ++M    IK+ Y+EI TP +++      +G +  ++ + F 
Sbjct: 160 GARFLFYKNLGARLERALYNFMLDEHIKEGYQEIITPYMVNHDSMFGTGQYPKFKEDTFE 219

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---L 377
           +    DT      F L P         +   +   +ELP+        +R+E   +    
Sbjct: 220 LS---DT-----NFVLIPTAEVPLTNYYRGEILDGKELPIYFTAMSPSFRSEAGSAGRDT 271

Query: 378 HGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
            GL+R+  F + +   F   E+ + E  K+     +I +  G    ++ L T
Sbjct: 272 RGLIRLHQFHKVEMVKFAKPEKSYQELEKMTANAENILQKLGLPYRVIALCT 323


>gi|300814156|ref|ZP_07094439.1| alanine--tRNA ligase [Peptoniphilus sp. oral taxon 836 str. F0141]
 gi|300511813|gb|EFK39030.1| alanine--tRNA ligase [Peptoniphilus sp. oral taxon 836 str. F0141]
          Length = 874

 Score = 40.4 bits (93), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 33/139 (23%), Positives = 64/139 (46%), Gaps = 21/139 (15%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++ +A++ I  +     G ++E D   +DF   Q  S +E+ ++E+++ + I   
Sbjct: 566 HSVTHLLHKALKEILGDHVNQAGSLVEADRLRFDFTHYQAMSQEEIKKVEERVNQKIFEA 625

Query: 134 SPFLKQYLSHEKAREL-----FESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPH 187
                   + + A+EL     FE K               + V +   G++  +LC G H
Sbjct: 626 LSVTTTVTNPKHAQELGAVGLFEEK-------------YGDIVRVLSMGDYSIELCGGTH 672

Query: 188 VRSTGQVKKFFKLMKVAGA 206
           VR+T ++   FK++  +G 
Sbjct: 673 VRNTSEI-SMFKILSESGV 690


>gi|258593203|emb|CBE69542.1| Prolyl-tRNA synthetase (Proline--tRNA ligase) (ProRS) [NC10
           bacterium 'Dutch sediment']
          Length = 572

 Score = 40.4 bits (93), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 36/171 (21%), Positives = 72/171 (42%), Gaps = 10/171 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+E   H+ + R   +  +A   +G+      G ++   + + +R ++ + D +EI  P 
Sbjct: 17  EAEAISHKLMVRAGLVRQLA---AGIYITLPLGQRVMDKISAIIREEMNRIDGQEITMPV 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQQ+G W +    MF +    D  K      +        +A     ++SYR+L
Sbjct: 74  LHPAELWQQTGRWATIGEEMFRLY---DRGKRQMCLGMTHEEVVAWLAARE--IRSYRDL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
           P    +  +  R+E      G++R R F   D++     +    +  ++H 
Sbjct: 129 PQTWYQIQTKLRDEARPK-SGVLRTREFVMKDSYSLDRDDAGLEKSYELHK 178


>gi|146418501|ref|XP_001485216.1| hypothetical protein PGUG_02945 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 462

 Score = 40.4 bits (93), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 50/215 (23%), Positives = 81/215 (37%), Gaps = 16/215 (7%)

Query: 245 DHRKLAREMDL--FHIAEDGSGVIFWHR--KGWKIFQTLISYMRRKIKD-DYEEINTPQV 299
           DHR++A  + +  F  A   SG  +++    G  + Q L+ Y  +K +   Y  +  P +
Sbjct: 175 DHREIAENLSIVDFQSAAKVSGSSWYYLIGDGALLEQALVQYGLKKARQYGYRMVTPPSI 234

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           +        G   + + N   +   +     L   A  P+        F +G K     P
Sbjct: 235 VKNEFVHACGFKPNDQNNEKQIYGIEGGNLSLTGTAEIPLGAIHSGTDFENGQK----FP 290

Query: 360 VRLAEFGSVYRNEPSG---SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ++       YR E         GL RV  FT+ +   F T E    E   +  L   I +
Sbjct: 291 IKYVGVSRAYRAEAGARGKDTKGLYRVHEFTKVELFHFTTPEYAKQELEDLRQLQTEIIE 350

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWD-DAENIMKG 450
           + G    M+K+   P   +G+ AL   D E  M G
Sbjct: 351 ELGLMSKMIKM---PADDLGAPALMKYDCEAWMPG 382


>gi|302023989|ref|ZP_07249200.1| alanyl-tRNA synthetase [Streptococcus suis 05HAS68]
 gi|330833035|ref|YP_004401860.1| alanyl-tRNA synthetase [Streptococcus suis ST3]
 gi|329307258|gb|AEB81674.1| alanyl-tRNA synthetase [Streptococcus suis ST3]
          Length = 872

 Score = 40.4 bits (93), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 87/197 (44%), Gaps = 26/197 (13%)

Query: 17  FPVHATGSDVAESISRSLAKKAVAVAINGK---VCDLSDPVREGSIEIITPEDPRSLAVI 73
           F  +ATG  VA  I        V  A NG+     +LS  +  G    +  E  R   V 
Sbjct: 512 FVKNATGDIVATVID-------VQKAPNGQPLHTVELSASISVGQTYTLEIETKRRKGVE 564

Query: 74  R-HSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY-YDFDKEQPFSSDELAQIEKKMQEIIA 131
           + H+  H++  A+ +I  E     G + E  F  +DF   +  +++EL +IE+++ E I 
Sbjct: 565 KNHTATHLLHAALHNIIGEHATQAGSLNEQDFLRFDFTHFEAVTAEELRRIEEEVNEQIW 624

Query: 132 RDSPFLKQYLSHEKARELFESK--KEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHV 188
              P +      + A+E+       E Y  E+         VT+   G++  +LC G HV
Sbjct: 625 NAIPVVTVETDIDTAKEMGAMALFGEKYGKEV-------RVVTI---GDYSVELCGGTHV 674

Query: 189 RSTGQVKKFFKLMKVAG 205
            +T ++   FK++K  G
Sbjct: 675 GNTAEI-GIFKILKEEG 690


>gi|262527561|sp|A4W221|SYA_STRS2 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
          Length = 872

 Score = 40.4 bits (93), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 87/197 (44%), Gaps = 26/197 (13%)

Query: 17  FPVHATGSDVAESISRSLAKKAVAVAINGK---VCDLSDPVREGSIEIITPEDPRSLAVI 73
           F  +ATG  VA  I        V  A NG+     +LS  +  G    +  E  R   V 
Sbjct: 512 FVKNATGDIVATVID-------VQKAPNGQPLHTVELSASISVGQTYTLEIETKRRKGVE 564

Query: 74  R-HSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY-YDFDKEQPFSSDELAQIEKKMQEIIA 131
           + H+  H++  A+ +I  E     G + E  F  +DF   +  +++EL +IE+++ E I 
Sbjct: 565 KNHTATHLLHAALHNIIGEHATQAGSLNEQDFLRFDFTHFEAVTAEELRRIEEEVNEQIW 624

Query: 132 RDSPFLKQYLSHEKARELFESK--KEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHV 188
              P +      + A+E+       E Y  E+         VT+   G++  +LC G HV
Sbjct: 625 NAIPVVTVETDIDTAKEMGAMALFGEKYGKEV-------RVVTI---GDYSVELCGGTHV 674

Query: 189 RSTGQVKKFFKLMKVAG 205
            +T ++   FK++K  G
Sbjct: 675 GNTAEI-GIFKILKEEG 690


>gi|323464290|gb|ADX76443.1| alanyl-tRNA synthetase [Staphylococcus pseudintermedius ED99]
          Length = 876

 Score = 40.4 bits (93), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 39/159 (24%), Positives = 71/159 (44%), Gaps = 20/159 (12%)

Query: 54  VREGSIEIITPEDPRSLAVIR-HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKE 111
           VRE +    T +     A+++ HS  H++  A++ +  E     G +++ D   +DF   
Sbjct: 543 VREAAEVTATIDRQARTAIMKNHSATHLLHAALKKVLGEHVNQAGSLVDSDRLRFDFSHI 602

Query: 112 QPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKAR-----ELFESKKEAYKVEILESIP 166
            P ++ E+ Q+E+ + E I    P   Q ++ E A+      LF  +K    V ++   P
Sbjct: 603 APMTAKEMKQVEQMVNEEIWNSIPVEIQEMNIEDAKAKGAMALF-GEKYGDIVRVVNMQP 661

Query: 167 AKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAG 205
                         +LC G HVR+T ++   FK+   +G
Sbjct: 662 FS-----------IELCGGTHVRNTSEI-GLFKITSESG 688


>gi|47202575|emb|CAF87891.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 366

 Score = 40.4 bits (93), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 2/88 (2%)

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH-VFCTKEQMFNECLKIHNL 410
           ++S+R+LP++L ++ +V R E        +R R F   + H  F TKE+   E L+I +L
Sbjct: 9   VQSHRDLPIKLNQWCNVVRWE-FKHPQPFLRTREFLWQEGHTAFATKEEAAEEVLQILDL 67

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRVGSD 438
              +Y++     ++    T  EK  G D
Sbjct: 68  YARVYEELMAIPVVKGRKTEKEKFAGGD 95


>gi|312131710|ref|YP_003999050.1| prolyl-tRNA synthetase [Leadbetterella byssophila DSM 17132]
 gi|311908256|gb|ADQ18697.1| prolyl-tRNA synthetase [Leadbetterella byssophila DSM 17132]
          Length = 490

 Score = 40.4 bits (93), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 60/306 (19%), Positives = 123/306 (40%), Gaps = 68/306 (22%)

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLK 406
           + + ++S+R+LP+ + ++ +V R E    L   +R   F   + H    T+E+   E   
Sbjct: 132 YKNWVQSHRDLPILINQWANVVRWEMRTRL--FLRTAEFLWQEGHTAHATREEAVAET-- 187

Query: 407 IHNLIISIYKDFGFEKIMVKL----STRPEKRVGSD------ALWDDAENIMKGVLDTIK 456
             N ++ +Y  F  E + V +     T  E+  G+D      AL  D + +  G      
Sbjct: 188 --NQMLEVYAKFAEEWMAVPVVRGRKTANERFAGADDTLCIEALMQDGKALQAG------ 239

Query: 457 NSSQDRINTGVLLGEGAFYGPKFEYILKDAIGR-DWQCGTIQVDFNLPSRFNAFYVNSHS 515
                   T   LG+   +   F+   +D  G+ ++  GT    + + +R     + +HS
Sbjct: 240 --------TSHFLGQN--FAKAFDVKFQDKTGKQEFVWGT---SWGVSTRLMGALIMAHS 286

Query: 516 EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTI------TSSAVEYAQ 569
           +                  +G++       LP  L+PIQ ++  I       ++  E  +
Sbjct: 287 DD-----------------LGLV-------LPPKLAPIQVVIVPIYKGEEQLNAIFERME 322

Query: 570 EIANLLKSHHLSIETDFRNET-INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
                LK   +S++ D  +     +K  E+ +K +P+ I  G ++     + + R  + +
Sbjct: 323 PTIKSLKVQGISVKFDDDDSARPGWKFAEYELKGVPVRIAVGARDLENHQVEVARRDTLS 382

Query: 629 TQKVSL 634
            + VS+
Sbjct: 383 KESVSM 388


>gi|325662331|ref|ZP_08150940.1| hypothetical protein HMPREF0490_01679 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|331086134|ref|ZP_08335216.1| hypothetical protein HMPREF0987_01519 [Lachnospiraceae bacterium
           9_1_43BFAA]
 gi|325471333|gb|EGC74556.1| hypothetical protein HMPREF0490_01679 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|330406293|gb|EGG85807.1| hypothetical protein HMPREF0987_01519 [Lachnospiraceae bacterium
           9_1_43BFAA]
          Length = 767

 Score = 40.4 bits (93), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 22/81 (27%), Positives = 43/81 (53%), Gaps = 6/81 (7%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEII 62
           D+    P+G +KN P  +T  D A +I  ++  K V   +NGK+  +   ++ G  IEI+
Sbjct: 423 DVYCFTPNGDVKNLPNGSTPIDFAYAIHSAVGNKMVGARVNGKLVTIDYKIQNGDRIEIL 482

Query: 63  TPEDPRS-----LAVIRHSCA 78
           T ++ +      L++++ + A
Sbjct: 483 TSQNSKGPSRDWLSIVKSTQA 503


>gi|165971562|gb|AAI58467.1| LOC100145057 protein [Xenopus (Silurana) tropicalis]
          Length = 674

 Score = 40.4 bits (93), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 2/106 (1%)

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
            A++P +       +   ++S+R+LP++L ++ +V R E        +R R F   + H 
Sbjct: 278 IAVRPTSETVMYPAYAKWVQSHRDLPIKLNQWCNVVRWEFKHP-QPFLRTREFLWQEGHT 336

Query: 394 -FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD 438
            F T E+   E L+I +L   +Y+D     ++    T  EK  G D
Sbjct: 337 AFATYEEAAEEVLQILDLYARVYEDLLAIPVVKGRKTEKEKFAGGD 382


>gi|110834659|ref|YP_693518.1| alanyl-tRNA synthetase [Alcanivorax borkumensis SK2]
 gi|110647770|emb|CAL17246.1| (alanyl-tRNA synthetase) [Alcanivorax borkumensis SK2]
          Length = 900

 Score = 40.4 bits (93), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 39/146 (26%), Positives = 65/146 (44%), Gaps = 17/146 (11%)

Query: 68  RSLAVIR-HSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           R LAV+R HS  H+M  A++++  E VQ     +  D   +DF   +  S  +  +IE  
Sbjct: 581 RRLAVMRNHSATHLMHAALRNVLGEHVQQKGSLVSADYLRFDFSHGEAVSEAQREEIEIL 640

Query: 126 MQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +   I  ++    + +  E ARE     LF  K +  +V +L         ++   G   
Sbjct: 641 VNRQILANTAVTTELMDIESAREAGAMALFGEKYDD-QVRVL---------SMGSDGFSK 690

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGA 206
           +LC G HV  TG +  F   ++ + A
Sbjct: 691 ELCGGTHVNRTGDIGLFRITLEASAA 716


>gi|291541032|emb|CBL14143.1| Uridine kinase [Roseburia intestinalis XB6B4]
          Length = 561

 Score = 40.4 bits (93), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 40/189 (21%), Positives = 76/189 (40%), Gaps = 7/189 (3%)

Query: 15  KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVI 73
           K +P   +   +A+          V    N ++ +L   V+ +G +  +T  D       
Sbjct: 20  KTYPAGVSFLSIAQEYQDQYEDDIVLALYNNRLRELKKTVKKDGELSFLTTSDKTGKRAY 79

Query: 74  RHSCAHIMAEAVQSIW--PEVQVAIGPIIEDGFYYDFDKEQ---PFSSDELAQIEKKMQE 128
           R S   +M +AV ++W    + V +   I  G+Y +  K+      +   +  ++K+M  
Sbjct: 80  RRSVTLLMQKAVYNLWGREHIGVYVRYAIGQGYYCELMKDGESCKITETMIGALKKEMYR 139

Query: 129 IIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           ++  D P  K  ++ ++A  LF       K E L        V +Y    + D   G  V
Sbjct: 140 LVMADLPIEKYSMNTDEAVALFHELGMKDK-EKLFRYRRSSRVNIYELDHYKDYFYGFMV 198

Query: 189 RSTGQVKKF 197
            STG ++ +
Sbjct: 199 PSTGYLRYY 207


>gi|290968328|ref|ZP_06559869.1| alanine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
 gi|290781603|gb|EFD94190.1| alanine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
          Length = 869

 Score = 40.4 bits (93), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 35/156 (22%), Positives = 70/156 (44%), Gaps = 21/156 (13%)

Query: 50  LSDPVREGSIEIITPEDPRSLAVIR-HSCAHIMAEAV-QSIWPEVQVAIGPIIEDGFYYD 107
           +   +++G    +  +  R  A+ R H+  H++  A+ Q +   V  A   +  D   +D
Sbjct: 530 MEGSLKKGETVTVAVDTERHAALARNHTATHLLHTALRQVLGNHVNQAGSLVTPDHLRFD 589

Query: 108 FDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEIL 162
           F    P ++ EL + E+ +   I +++P +   ++ E+A++     LF  K         
Sbjct: 590 FTHFSPVTAAELREAEQLVNREILKNTPVMVTEMNREEAKQKGATALFGEKY-------- 641

Query: 163 ESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
                 + V +   G++  +LC G HV+ST +V  F
Sbjct: 642 -----GDVVRVVSIGDFSCELCGGSHVKSTAEVGTF 672


>gi|283798149|ref|ZP_06347302.1| putative alanyl-tRNA synthetase domain-containing protein 1
           [Clostridium sp. M62/1]
 gi|291074129|gb|EFE11493.1| putative alanyl-tRNA synthetase domain-containing protein 1
           [Clostridium sp. M62/1]
          Length = 387

 Score = 40.4 bits (93), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 61/137 (44%), Gaps = 18/137 (13%)

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           +HS  HI++  + S++    V      E+      D   P S +EL +IE+K    I  +
Sbjct: 95  QHSGEHIVSGLIHSVYGYDNVGFHMGREE---MTIDLNGPMSWEELMEIEEKANRAIWAN 151

Query: 134 SPFLKQYLSHEKAREL-FESKKE-AYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRST 191
            P    Y S E+  +L + SKKE + +V I+E +P  +             C G HV  T
Sbjct: 152 IPLKITYPSEEELEKLDYRSKKELSGQVRIVE-VPGVDTCA----------CCGTHVAYT 200

Query: 192 GQVK--KFFKLMKVAGA 206
           G++   KF  LM   G 
Sbjct: 201 GEIGVIKFLSLMNYKGG 217


>gi|253699682|ref|YP_003020871.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacter sp. M21]
 gi|251774532|gb|ACT17113.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacter sp. M21]
          Length = 716

 Score = 40.4 bits (93), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 1/63 (1%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI-E 60
           P D+ +  P G +K FP  +T  D A S+   +  + V   +NGK+  L   ++ G I E
Sbjct: 384 PEDVFIFTPKGDVKGFPKGSTPIDFAYSVHTDVGHRCVGAKVNGKLVPLKYELKTGDIVE 443

Query: 61  IIT 63
           +IT
Sbjct: 444 VIT 446


>gi|53713725|ref|YP_099717.1| prolyl-tRNA synthetase [Bacteroides fragilis YCH46]
 gi|60681995|ref|YP_212139.1| prolyl-tRNA synthetase [Bacteroides fragilis NCTC 9343]
 gi|265764051|ref|ZP_06092619.1| prolyl-tRNA synthetase [Bacteroides sp. 2_1_16]
 gi|81314941|sp|Q5LCF0|SYP_BACFN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|81382377|sp|Q64TJ6|SYP_BACFR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|52216590|dbj|BAD49183.1| prolyl-tRNA synthetase [Bacteroides fragilis YCH46]
 gi|60493429|emb|CAH08215.1| prolyl-tRNA synthetase [Bacteroides fragilis NCTC 9343]
 gi|263256659|gb|EEZ28005.1| prolyl-tRNA synthetase [Bacteroides sp. 2_1_16]
 gi|301163433|emb|CBW22984.1| prolyl-tRNA synthetase [Bacteroides fragilis 638R]
          Length = 497

 Score = 40.4 bits (93), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 62/299 (20%), Positives = 126/299 (42%), Gaps = 56/299 (18%)

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLK 406
           + + ++SYR+LP+   ++ +V+R E    L   +R   F   + H    T+E+   E ++
Sbjct: 135 YKNWIQSYRDLPILCNQWANVFRWEMRTRL--FLRTAEFLWQEGHTAHATREEAEEEAIR 192

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           + N    +Y +F  EK M                   A  ++KGV      S+ +R    
Sbjct: 193 MLN----VYAEFA-EKYM-------------------AVPVVKGV-----KSANERF--- 220

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
                GA      E +++D  G+  Q GT   +  N    F+  +VN  ++  +   +  
Sbjct: 221 ----AGALDTYTIEAMMQD--GKALQSGTSHFLGQNFAKAFDVQFVNKENKLEY---VWA 271

Query: 526 AVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTITSSAVEY------AQEIANLL 575
             +G   R +G +I     +    LP  L+PIQ ++  I  +  +        + I   L
Sbjct: 272 TSWGVSTRLMGALIMTHSDDNGLVLPPHLAPIQVVIVPIYKNDEQLKLIDAKVEGIVARL 331

Query: 576 KSHHLSIETD-FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
           K   +S++ D   N+   +K  ++ +K +P+ ++ G ++    ++ + R  +   + V+
Sbjct: 332 KQLGISVKYDNADNKRPGFKFADYELKGVPVRLVMGGRDLENNTMEVMRRDTLEKETVT 390


>gi|319779380|ref|YP_004130293.1| Alanyl-tRNA synthetase [Taylorella equigenitalis MCE9]
 gi|317109404|gb|ADU92150.1| Alanyl-tRNA synthetase [Taylorella equigenitalis MCE9]
          Length = 874

 Score = 40.4 bits (93), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 46/193 (23%), Positives = 85/193 (44%), Gaps = 27/193 (13%)

Query: 23  GSDVAESISRSLAKKAVAVAIN--GKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHI 80
           GSD  + +S S  +K         G+V   S  + + S++ I   + R L    HS  H+
Sbjct: 511 GSDTDKQVSISDTRKITPTVFGHYGRVEKGSIKLND-SVDAIVNAENRVLVTAHHSVTHL 569

Query: 81  MAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKM--QEIIARDS--- 134
           M  A++ +  +     G +++ +   +DF    P + +E+ ++E  +  Q ++ RD+   
Sbjct: 570 MHLALREVLGDHVKQKGSLVDSEKTRFDFSHNSPMTEEEIRKVELLVNNQILMGRDTYVE 629

Query: 135 --PFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTG 192
             P+     S   A  LF  K   +             V + + G+  +LC G HV +TG
Sbjct: 630 VMPYDDALKS--GAIGLFGEKYGDF-------------VRVMQIGDSRELCGGTHVSNTG 674

Query: 193 QVKKFFKLMKVAG 205
           Q+   FK++  +G
Sbjct: 675 QI-GLFKIISESG 686


>gi|315038965|ref|YP_004032533.1| seryl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
 gi|325957391|ref|YP_004292803.1| seryl-tRNA synthetase [Lactobacillus acidophilus 30SC]
 gi|312277098|gb|ADQ59738.1| seryl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
 gi|325333956|gb|ADZ07864.1| seryl-tRNA synthetase [Lactobacillus acidophilus 30SC]
 gi|327184099|gb|AEA32546.1| seryl-tRNA synthetase [Lactobacillus amylovorus GRL 1118]
          Length = 435

 Score = 40.4 bits (93), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 31/151 (20%), Positives = 65/151 (43%), Gaps = 4/151 (2%)

Query: 282 YMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           ++    KD Y E+  P +++    Q +G +  +  +++ +   DD  K  R   L P   
Sbjct: 181 FLDENTKDGYTEVIPPYLVNDASMQGTGQFPKFHEDVYTIVDNDDPDKP-RDLTLIPTAE 239

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKE 398
              V  F + +    +LP+ +      +R+E   +     GL+R+  F + +    C  +
Sbjct: 240 VPLVNYFRNEIIHGDKLPINVTALSPAFRSEAGSAGRDTRGLIRMHEFRKVEMVKVCKPD 299

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
           + ++E  K+ +    + +  G    +V LST
Sbjct: 300 ESWDELEKLTHNAEHLLQKLGLPYHVVALST 330


>gi|304407565|ref|ZP_07389217.1| alanyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
 gi|304343516|gb|EFM09358.1| alanyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
          Length = 877

 Score = 40.4 bits (93), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 16/160 (10%)

Query: 51  SDPVREG-SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDF 108
           S  VR G S +     D R   V  H+  H++ +A++ +  E     G +++ D   +DF
Sbjct: 537 SGTVRVGESAQASVARDLREDIVKNHTATHLLHKALKEVLGEHVNQAGSLVKSDSLRFDF 596

Query: 109 DKEQPFSSDELAQIEKKMQEIIARDSPFL--KQYLSHEKARELFESKKEAYKVEILESIP 166
                 + +ELA IE+++ E I   +P +   + ++  KA        E Y         
Sbjct: 597 SHFGAITEEELADIERRVNEQIWIGTPVVIESKAIAEAKAMGAMALFGEKY--------- 647

Query: 167 AKENVTLYRQGEW-FDLCRGPHVRSTGQVKKFFKLMKVAG 205
             + V + + G +  +LC G HV +T Q+   FKL+  +G
Sbjct: 648 -GDVVRVVQVGGYSIELCGGCHVANTSQIGT-FKLIGESG 685


>gi|253743717|gb|EET00043.1| Glycyl-tRNA synthetase [Giardia intestinalis ATCC 50581]
          Length = 621

 Score = 40.4 bits (93), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 1/56 (1%)

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQ 388
           T  L+P    G    F  G++  ++LP  +A+ G+V+RNE S   + L+RVR F Q
Sbjct: 176 TVYLRPETAQGIFMNFKRGMEQAKQLPFAMAQVGTVFRNEISPR-NSLLRVREFEQ 230


>gi|258569006|ref|XP_002585247.1| predicted protein [Uncinocarpus reesii 1704]
 gi|237906693|gb|EEP81094.1| predicted protein [Uncinocarpus reesii 1704]
          Length = 598

 Score = 40.4 bits (93), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 53/114 (46%), Gaps = 10/114 (8%)

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           Q LW++SG  +   + +F         +   +F L P +     A+    +KSYR+LP+R
Sbjct: 87  QELWKRSGRLND-DSEIFRF-----NDRKGASFLLAPTHEEEITALVGSLVKSYRDLPLR 140

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           + +    YR+EP     GL+R R F   D + F   +    + L  +N +  +Y
Sbjct: 141 VYQITRKYRDEPR-PRQGLLRGREFLMKDLYTF---DYSAEKGLDTYNTVKEVY 190


>gi|146318890|ref|YP_001198602.1| alanyl-tRNA synthetase [Streptococcus suis 05ZYH33]
 gi|253751968|ref|YP_003025109.1| alanyl-tRNA synthetase [Streptococcus suis SC84]
 gi|253753793|ref|YP_003026934.1| alanyl-tRNA synthetase [Streptococcus suis P1/7]
 gi|253755331|ref|YP_003028471.1| alanyl-tRNA synthetase [Streptococcus suis BM407]
 gi|205830232|sp|A4VVR3|SYA_STRSY RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|145689696|gb|ABP90202.1| Alanyl-tRNA synthetase [Streptococcus suis 05ZYH33]
 gi|251816257|emb|CAZ51885.1| alanyl-tRNA synthetase [Streptococcus suis SC84]
 gi|251817795|emb|CAZ55547.1| alanyl-tRNA synthetase [Streptococcus suis BM407]
 gi|251820039|emb|CAR46252.1| alanyl-tRNA synthetase [Streptococcus suis P1/7]
 gi|319758333|gb|ADV70275.1| alanyl-tRNA synthetase [Streptococcus suis JS14]
          Length = 872

 Score = 40.4 bits (93), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 87/197 (44%), Gaps = 26/197 (13%)

Query: 17  FPVHATGSDVAESISRSLAKKAVAVAINGK---VCDLSDPVREGSIEIITPEDPRSLAVI 73
           F  +ATG  VA  I        V  A NG+     +LS  +  G    +  E  R   V 
Sbjct: 512 FVKNATGDIVATVID-------VQKAPNGQPLHTVELSASISVGQTYTLEIETKRRKGVE 564

Query: 74  R-HSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY-YDFDKEQPFSSDELAQIEKKMQEIIA 131
           + H+  H++  A+ +I  E     G + E  F  +DF   +  +++EL +IE+++ E I 
Sbjct: 565 KNHTATHLLHAALHNIIGEHATQAGSLNEQDFLRFDFTHFEAVTAEELRRIEEEVNEQIW 624

Query: 132 RDSPFLKQYLSHEKARELFESK--KEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHV 188
              P +      + A+E+       E Y  E+         VT+   G++  +LC G HV
Sbjct: 625 NAIPVVTVETDIDTAKEMGAMALFGEKYGKEV-------RVVTI---GDYSVELCGGTHV 674

Query: 189 RSTGQVKKFFKLMKVAG 205
            +T ++   FK++K  G
Sbjct: 675 GNTAEI-GIFKILKEEG 690


>gi|85000409|ref|XP_954923.1| seryl-tRNA synthetase [Theileria annulata strain Ankara]
 gi|65303069|emb|CAI75447.1| seryl-tRNA synthetase, putative [Theileria annulata]
          Length = 532

 Score = 40.4 bits (93), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 35/186 (18%), Positives = 67/186 (36%), Gaps = 33/186 (17%)

Query: 262 GSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           G    F   KG  +   LI Y ++  ++  Y  ++TP  + + +  +    D +   ++ 
Sbjct: 234 GHRAFFLKGKGCLLNMALIQYGLQFLVRKGYLPVHTPYFMRKEVMSECAELDDFETTLYC 293

Query: 321 VKCADDTIKDLRTFALKPMNCPGH-------------------------VAVFNHGLKSY 355
           +   D T  +    A K  +  G                           A+  + +   
Sbjct: 294 IPLTDSTAPNATADATKTTSTNGTRDMELKEKDVDKNKLFLIATSEQPIAALHRNEVYQK 353

Query: 356 RELPVRLAEFGSVYRNEPSG---SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
           ++LP+R A   + +R E       L G+ RV  F + +  V CT E    E    H  ++
Sbjct: 354 KQLPIRYAGISTCFRREAGAHGKDLRGIFRVHQFQKVEQFVVCTPENSIQE----HEQMV 409

Query: 413 SIYKDF 418
              ++F
Sbjct: 410 KFSEEF 415


>gi|288904885|ref|YP_003430107.1| alanyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
 gi|288731611|emb|CBI13166.1| alanyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
          Length = 872

 Score = 40.4 bits (93), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 45/188 (23%), Positives = 85/188 (45%), Gaps = 22/188 (11%)

Query: 39  VAVAINGK---VCDLSDPVREGSIEIITPEDPRSLAVIR-HSCAHIMAEAVQSIWPEVQV 94
           V  A NG+     D+   +  G+   +  +  R   VI+ H+  H++  A+ ++  E   
Sbjct: 527 VQKAPNGQALHTVDVLSSLSVGTTYTLEIDSKRRHRVIKNHTATHLLHAALHNVIGEHAT 586

Query: 95  AIGPIIEDGFY-YDFDKEQPFSSDELAQIEKKMQEIIARDSPF--LKQYLSHEKARELFE 151
             G + E+GF  +DF   +  +++EL QIE+++ + I    P   ++  +   K+     
Sbjct: 587 QAGSLNEEGFLRFDFTHFEAVTAEELRQIEEEVNQQIWNAIPVKTIETDIDTAKSMGAMA 646

Query: 152 SKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRG 210
              E Y           +NV +   G++  +LC G HV +T ++   FK++K  G    G
Sbjct: 647 LFGEKY----------GKNVRVVTIGDYSIELCGGTHVSNTAEI-GIFKIVKEEGI---G 692

Query: 211 DSNRPMLS 218
              R +L+
Sbjct: 693 SGTRRILA 700


>gi|322420743|ref|YP_004199966.1| (p)ppGpp synthetase I SpoT/RelA [Geobacter sp. M18]
 gi|320127130|gb|ADW14690.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacter sp. M18]
          Length = 716

 Score = 40.4 bits (93), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 1/63 (1%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI-E 60
           P D+ +  P G +K FP  +T  D A S+   +  + V   +NGK+  L   ++ G I E
Sbjct: 384 PEDVFIFTPKGDVKGFPKGSTPIDFAYSVHTDVGHRCVGAKVNGKLVPLKYELKTGDIVE 443

Query: 61  IIT 63
           +IT
Sbjct: 444 VIT 446


>gi|170592483|ref|XP_001900994.1| probable proline-trna synthetase - fission yeast [Brugia malayi]
 gi|158591061|gb|EDP29674.1| probable proline-trna synthetase - fission yeast, putative [Brugia
           malayi]
          Length = 396

 Score = 40.4 bits (93), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 15/112 (13%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           +I+ P +  + +WQ++G W ++ + MF +    + I  L+         P H  +    +
Sbjct: 38  KISMPILGAKEMWQKAGRWSAFESEMFHLSDKTNQIYCLQ---------PTHEEMVTKLV 88

Query: 353 KSYREL-----PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQ 399
               EL     P+ L + G  +R+E     HG +R R F  +D + F   EQ
Sbjct: 89  AEQGELRQAVYPLMLYQMGPKFRDETVVG-HGFLRSREFLMNDLYSFDLTEQ 139


>gi|124267510|ref|YP_001021514.1| alanyl-tRNA synthetase [Methylibium petroleiphilum PM1]
 gi|205830143|sp|A2SI90|SYA_METPP RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|124260285|gb|ABM95279.1| alanyl-tRNA synthetase [Methylibium petroleiphilum PM1]
          Length = 875

 Score = 40.4 bits (93), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 35/145 (24%), Positives = 67/145 (46%), Gaps = 18/145 (12%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWP-EVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           + R+  V  HS  H+M +A++ +    VQ     +  +   +DF    P S  ++A++E 
Sbjct: 556 EQRARTVRNHSVTHLMHKALREVLGGHVQQKGSLVNAERTRFDFAHNAPMSDAQIAKVEA 615

Query: 125 KMQEIIARDSPFLKQYLSHEKAREL----FESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            +   I  ++P   + L  E+A++L       +K   +V +L+   ++E           
Sbjct: 616 IVNAEILANAPTQARVLPMEEAQKLGAMMLFGEKYGDEVRVLDIGSSRE----------- 664

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAG 205
            LC G HV+ TG +   FK++  +G
Sbjct: 665 -LCGGTHVQRTGDI-GLFKVVAESG 687


>gi|295099596|emb|CBK88685.1| alanyl-tRNA synthetase [Eubacterium cylindroides T2-87]
          Length = 875

 Score = 40.4 bits (93), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 34/143 (23%), Positives = 66/143 (46%), Gaps = 18/143 (12%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSS 116
           S+     E  R      HSC H++  A++ +  E +  A   + ++   +DF+  +  ++
Sbjct: 546 SLHCHVDEAKRKATTANHSCTHLLQSALKEVVGEHIHQAGSYVCDEYLRFDFNHFEKLTT 605

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENV 171
            +L +IE  + + IA   P  K+ +  E+A++     LF ++K   +V +         V
Sbjct: 606 KQLDEIEDLVNQYIAGAYPVTKEIMDIEEAKKSGATALF-NEKYGDRVRV---------V 655

Query: 172 TLYRQGEWFDLCRGPHVRSTGQV 194
           T+    + F  C G HV +T Q+
Sbjct: 656 TMGDVSKEF--CAGCHVENTSQI 676


>gi|159900152|ref|YP_001546399.1| alanyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
 gi|205830067|sp|A9B660|SYA_HERA2 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|159893191|gb|ABX06271.1| alanyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
          Length = 889

 Score = 40.4 bits (93), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 38/163 (23%), Positives = 77/163 (47%), Gaps = 16/163 (9%)

Query: 54  VREGSIEI-----ITPEDPRSLAVIR-HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYY 106
           V +GS+ +     +T +  R   ++R H+  H++  A++    +     G ++  +   +
Sbjct: 539 VSKGSVSLGEQVTVTVDAARRRDIVRNHTATHLLHRALRDTLGDHAEQKGSLVAPERLRF 598

Query: 107 DFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKAREL------FESKKEAYKVE 160
           DF+ ++  SS++L QIE ++   I  DS      ++  +AREL       E   +  +V 
Sbjct: 599 DFNNQKGLSSEQLQQIEDQVNAWIRADSKVEAAEMALPQARELGAMALFGEKYGDVVRVV 658

Query: 161 ILESIPAKENVTLYRQGEWF--DLCRGPHVRSTGQVKKFFKLM 201
            +    A +++    +      +LC G HV  TG++  FFK++
Sbjct: 659 TVGCGNASDHIHTNSEAPVCSRELCGGVHVARTGEI-GFFKIV 700


>gi|94971059|ref|YP_593107.1| threonyl/alanyl tRNA synthetase, SAD [Candidatus Koribacter
           versatilis Ellin345]
 gi|94553109|gb|ABF43033.1| Threonyl/alanyl tRNA synthetase, SAD [Candidatus Koribacter
           versatilis Ellin345]
          Length = 403

 Score = 40.4 bits (93), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 37/151 (24%), Positives = 71/151 (47%), Gaps = 16/151 (10%)

Query: 48  CDLSD--PVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY 105
            D SD   +++G +      + R   + +H+  H+++ A +S++ E++     +  +   
Sbjct: 78  VDTSDVETLKDGRVRGFIDVERRRDHMQQHTGQHVLSSAFESLF-EMKTVSFHMGAESCT 136

Query: 106 YDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESI 165
            D D  +  + +++ + E    E+IA D P   +Y + ++AR +   K    + E L  I
Sbjct: 137 IDLDT-KALAPEQVKKAEAVANEVIAEDRPVEIKYATVDEARAMGVRKIPPAEREKLRLI 195

Query: 166 PAKENVTLYRQGEWFDL--CRGPHVRSTGQV 194
             K+          FDL  C G HVR+TGQ+
Sbjct: 196 DIKD----------FDLNACGGTHVRATGQI 216


>gi|56696902|ref|YP_167264.1| alanyl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
 gi|81558517|sp|Q5LRU1|SYA_SILPO RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|56678639|gb|AAV95305.1| alanyl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
          Length = 890

 Score = 40.4 bits (93), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 35/148 (23%), Positives = 62/148 (41%), Gaps = 5/148 (3%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPI-IEDGFYYDFDKEQPFSS 116
           ++E+      RS     HS  H++ EA++    +     G +   D   +DF   +  + 
Sbjct: 550 AVELEVDHARRSAIRANHSATHLLHEALREALGDHVAQRGSLNAADRLRFDFSHAKALTE 609

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESK--KEAYKVEI-LESIPAKENVTL 173
            ELAQ+  ++   I ++S    + ++ + AR +       E Y  E+ + S+   E    
Sbjct: 610 AELAQVGAEVNRFIRQNSRVETRIMTPDDARAIGAQALFGEKYGDEVRVVSMGRAETGKG 669

Query: 174 YRQGEW-FDLCRGPHVRSTGQVKKFFKL 200
                W  +LC G HV  TG +  F  L
Sbjct: 670 ADGKTWSIELCGGTHVAQTGDIGMFVLL 697


>gi|223933644|ref|ZP_03625622.1| alanyl-tRNA synthetase [Streptococcus suis 89/1591]
 gi|223897674|gb|EEF64057.1| alanyl-tRNA synthetase [Streptococcus suis 89/1591]
          Length = 872

 Score = 40.4 bits (93), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 87/197 (44%), Gaps = 26/197 (13%)

Query: 17  FPVHATGSDVAESISRSLAKKAVAVAINGK---VCDLSDPVREGSIEIITPEDPRSLAVI 73
           F  +ATG  VA  I        V  A NG+     +LS  +  G    +  E  R   V 
Sbjct: 512 FVKNATGDIVATVID-------VQKAPNGQPLHTVELSASISVGQTYTLEIETKRRKGVE 564

Query: 74  R-HSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY-YDFDKEQPFSSDELAQIEKKMQEIIA 131
           + H+  H++  A+ +I  E     G + E  F  +DF   +  +++EL +IE+++ E I 
Sbjct: 565 KNHTATHLLHAALHNIIGEHATQAGSLNEQDFLRFDFTHFEAVTAEELRRIEEEVNEQIW 624

Query: 132 RDSPFLKQYLSHEKARELFESK--KEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHV 188
              P +      + A+E+       E Y  E+         VT+   G++  +LC G HV
Sbjct: 625 NAIPVVTVETDIDTAKEMGAMALFGEKYGKEV-------RVVTI---GDYSVELCGGTHV 674

Query: 189 RSTGQVKKFFKLMKVAG 205
            +T ++   FK++K  G
Sbjct: 675 GNTAEI-GIFKILKEEG 690


>gi|332297434|ref|YP_004439356.1| alanyl-tRNA synthetase [Treponema brennaborense DSM 12168]
 gi|332180537|gb|AEE16225.1| alanyl-tRNA synthetase [Treponema brennaborense DSM 12168]
          Length = 595

 Score = 40.4 bits (93), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 31/130 (23%), Positives = 59/130 (45%), Gaps = 20/130 (15%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           H+  H++ +A++ +  +     G  I  +   +DF    P + +E+ ++E  + E I RD
Sbjct: 459 HTATHLLHKALKMVLGDHIAQKGSNITAERLRFDFSHPAPMTKEEIQRVEDIVNEQIRRD 518

Query: 134 SPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWF-DLCRGPH 187
                + +  E+A++     LF  K E+              V +Y  G++  ++C GPH
Sbjct: 519 LKVTMEVMDLEEAKKGGATALFGEKYES-------------KVKVYTIGDFSKEVCGGPH 565

Query: 188 VRSTGQVKKF 197
           V  TG +  F
Sbjct: 566 VEHTGLIGTF 575


>gi|91794782|ref|YP_564433.1| bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis
           pyrophosphate 3'-pyrophosphohydrolase [Shewanella
           denitrificans OS217]
 gi|91716784|gb|ABE56710.1| (p)ppGpp synthetase I, SpoT/RelA [Shewanella denitrificans OS217]
          Length = 701

 Score = 40.4 bits (93), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 1/68 (1%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIE 60
           P +I +  P+G I   PV+AT  D A  +   +    V   +N +   LS P+  G ++E
Sbjct: 387 PEEIYVFTPEGRILELPVNATAVDFAYEVHTDVGNTCVGARVNRQAYPLSQPLISGQTVE 446

Query: 61  IITPEDPR 68
           IIT +  R
Sbjct: 447 IITAKGAR 454


>gi|126172606|ref|YP_001048755.1| bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis
           pyrophosphate 3'-pyrophosphohydrolase [Shewanella
           baltica OS155]
 gi|125995811|gb|ABN59886.1| (p)ppGpp synthetase I, SpoT/RelA [Shewanella baltica OS155]
          Length = 701

 Score = 40.4 bits (93), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 1/68 (1%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIE 60
           P +I +  P+G I   PV+AT  D A  +   +    V   +N +   LS P+  G ++E
Sbjct: 387 PEEIYVFTPEGRILELPVNATAVDFAYEVHTDVGNTCVGARVNRQAYPLSQPLISGQTVE 446

Query: 61  IITPEDPR 68
           IIT +  R
Sbjct: 447 IITAKGAR 454


>gi|261749137|ref|YP_003256822.1| alanyl-tRNA synthetase [Blattabacterium sp. (Periplaneta americana)
           str. BPLAN]
 gi|261497229|gb|ACX83679.1| alanyl-tRNA synthetase [Blattabacterium sp. (Periplaneta americana)
           str. BPLAN]
          Length = 887

 Score = 40.4 bits (93), Expect = 1.00,   Method: Compositional matrix adjust.
 Identities = 33/135 (24%), Positives = 67/135 (49%), Gaps = 10/135 (7%)

Query: 75  HSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           H+  H++  +++ I  E +Q     + ED   +DF   +  + +EL QIE+ +Q++I  +
Sbjct: 570 HTSTHLLHFSLKKILGEHIQQKGSYVGEDYLRFDFSHPKKITIEELFQIEEMVQKLIFSN 629

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-ENVTLYRQGEWFDLCRGPHVRSTG 192
            P     L   ++  L E+ K+ Y     E    +   +T    G+  +LC G H ++TG
Sbjct: 630 LP-----LEERRSIPLQEAIKKGYNGIFYEKYEKEVRGITF---GDSSELCIGTHAKNTG 681

Query: 193 QVKKFFKLMKVAGAY 207
            ++ F  + +++ +Y
Sbjct: 682 CIQVFSIVSELSVSY 696


>gi|291286459|ref|YP_003503275.1| (p)ppGpp synthetase I, SpoT/RelA [Denitrovibrio acetiphilus DSM
           12809]
 gi|290883619|gb|ADD67319.1| (p)ppGpp synthetase I, SpoT/RelA [Denitrovibrio acetiphilus DSM
           12809]
          Length = 718

 Score = 40.4 bits (93), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 1/67 (1%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
           +P+ I +  P+G +   PV +T  D A SI   +  K     ++G++  L   +R G  I
Sbjct: 388 LPTQIYVFTPNGDVMELPVGSTPVDFAYSIHTEVGHKCKGAKVDGRIVPLKYKLRNGDRI 447

Query: 60  EIITPED 66
            IIT ED
Sbjct: 448 SIITGED 454


>gi|329849339|ref|ZP_08264185.1| alanyl-tRNA synthetase [Asticcacaulis biprosthecum C19]
 gi|328841250|gb|EGF90820.1| alanyl-tRNA synthetase [Asticcacaulis biprosthecum C19]
          Length = 878

 Score = 40.4 bits (93), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 67/138 (48%), Gaps = 14/138 (10%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS AH++  A++ +        G +++ +   +DF    P + DELA+IE ++  ++ ++
Sbjct: 564 HSAAHLVHAALRHVLGPHVAQKGQLVDAERMRFDFSHGGPLTVDELARIEAEVNAVVLQN 623

Query: 134 SPFLKQYLS-----HEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPH 187
           +    + ++        A  LF  +K   +V +L    A     L  QG++  +LC G H
Sbjct: 624 AAAATKLMTPEAAIEAGAIALF-GEKYGDEVRVLALGQA-----LDGQGDYSVELCGGTH 677

Query: 188 VRSTGQVKKFFKLMKVAG 205
           V  TG +   FK++  +G
Sbjct: 678 VARTGDI-ALFKIVSESG 694


>gi|325529341|gb|EGD06275.1| alanyl-tRNA synthetase [Burkholderia sp. TJI49]
          Length = 874

 Score = 40.4 bits (93), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 33/134 (24%), Positives = 64/134 (47%), Gaps = 19/134 (14%)

Query: 75  HSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H+M +A++ +    VQ     +  D   +DF    P S DE+ ++E+ + + I  +
Sbjct: 564 HSATHLMHKALREVLGAHVQQKGSLVDADKTRFDFAHNAPLSDDEIRRVEQIVNDEILAN 623

Query: 134 SPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           +P + + + +++A +     LF  +K   +V +L+   ++E            LC G HV
Sbjct: 624 APGIVRVMPYDEAVKGGAMALF-GEKYGDEVRVLDLGFSRE------------LCGGTHV 670

Query: 189 RSTGQVKKFFKLMK 202
             TG +  F  +M+
Sbjct: 671 SRTGDIGLFKIVME 684


>gi|301613126|ref|XP_002936064.1| PREDICTED: bifunctional aminoacyl-tRNA synthetase isoform 2 [Xenopus
            (Silurana) tropicalis]
          Length = 1553

 Score = 40.4 bits (93), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 2/106 (1%)

Query: 334  FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
             A++P +       +   ++S+R+LP++L ++ +V R E        +R R F   + H 
Sbjct: 1157 IAVRPTSETVMYPAYAKWVQSHRDLPIKLNQWCNVVRWEFKHP-QPFLRTREFLWQEGHT 1215

Query: 394  -FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD 438
             F T E+   E L+I +L   +Y+D     ++    T  EK  G D
Sbjct: 1216 AFATYEEAAEEVLQILDLYARVYEDLLAIPVVKGRKTEKEKFAGGD 1261


>gi|225568638|ref|ZP_03777663.1| hypothetical protein CLOHYLEM_04716 [Clostridium hylemonae DSM
           15053]
 gi|225162566|gb|EEG75185.1| hypothetical protein CLOHYLEM_04716 [Clostridium hylemonae DSM
           15053]
          Length = 793

 Score = 40.4 bits (93), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 1/66 (1%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEII 62
           D+    P G +KN P  +T  D A +I  ++  K V   +NGK+ ++   ++ G  IEI+
Sbjct: 449 DVYCFTPQGDVKNLPNGSTPIDFAYAIHSAVGNKMVGARVNGKLVNIDYKIQNGDRIEIL 508

Query: 63  TPEDPR 68
           T ++ +
Sbjct: 509 TSQNSK 514


>gi|213864684|ref|ZP_03386803.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
          Length = 33

 Score = 40.4 bits (93), Expect = 1.0,   Method: Composition-based stats.
 Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 6/39 (15%)

Query: 313 SYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           +Y+  MF       T  + R + +KPMNCPGHV +FN G
Sbjct: 1   NYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQG 33


>gi|24371957|ref|NP_715999.1| bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis
           pyrophosphate 3'-pyrophosphohydrolase [Shewanella
           oneidensis MR-1]
 gi|24345803|gb|AAN53444.1|AE015484_2 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
           [Shewanella oneidensis MR-1]
          Length = 701

 Score = 40.4 bits (93), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 1/68 (1%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIE 60
           P +I +  P+G I   PV+AT  D A  +   +    V   +N +   LS P+  G ++E
Sbjct: 387 PEEIYVFTPEGRILELPVNATAVDFAYEVHTDVGNTCVGARVNRQAYPLSQPLISGQTVE 446

Query: 61  IITPEDPR 68
           IIT +  R
Sbjct: 447 IITAKGAR 454


>gi|33152493|ref|NP_873846.1| alanyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
 gi|38372509|sp|Q7VLK0|SYA_HAEDU RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|33148716|gb|AAP96235.1| alanyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
          Length = 874

 Score = 40.4 bits (93), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 64/149 (42%), Gaps = 37/149 (24%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFSSDELAQIEKKM 126
           R      HS  H++  A++ +  E  V  G ++ E+   +DF + Q  S  +L +IE+  
Sbjct: 556 RQAITANHSATHLLHSALRQVLGEHVVQKGSLVSENVLRFDFSQSQAVSKAQLEEIER-- 613

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF------ 180
             I+ R    ++Q L              A  +E ++   AKE  T+   GE +      
Sbjct: 614 --IVNRQ---IRQNL--------------AVTIETMDIETAKEKGTVALFGEKYGDVVRV 654

Query: 181 --------DLCRGPHVRSTGQVKKFFKLM 201
                   +LC G HV+ TG++   FKL+
Sbjct: 655 VGMTDFSIELCGGTHVKHTGEI-GLFKLI 682


>gi|288574491|ref|ZP_06392848.1| phosphoribulokinase/uridine kinase [Dethiosulfovibrio peptidovorans
           DSM 11002]
 gi|288570232|gb|EFC91789.1| phosphoribulokinase/uridine kinase [Dethiosulfovibrio peptidovorans
           DSM 11002]
          Length = 546

 Score = 40.4 bits (93), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 24/98 (24%), Positives = 51/98 (52%), Gaps = 2/98 (2%)

Query: 100 IEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKV 159
           I +G +++ + E   + ++LA I + M+++I  D P  ++ +S +KA  +FE +    K 
Sbjct: 98  ISEGHFWELEDED-ITEEDLASIAETMKDLIGMDIPITREVVSLDKACRIFERQGNPEKG 156

Query: 160 EILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
            +   +   + + +YR  + +     P V STG +K +
Sbjct: 157 RLFSRV-YMDPIEVYRCLDMYGFFYCPLVPSTGYLKNW 193


>gi|197303672|ref|ZP_03168709.1| hypothetical protein RUMLAC_02399 [Ruminococcus lactaris ATCC
           29176]
 gi|197297192|gb|EDY31755.1| hypothetical protein RUMLAC_02399 [Ruminococcus lactaris ATCC
           29176]
          Length = 774

 Score = 40.4 bits (93), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 18/67 (26%), Positives = 37/67 (55%), Gaps = 1/67 (1%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEII 62
           D+    P+G +KN P  +T  D A +I  ++  K +   +NG++ ++   ++ G  IEI+
Sbjct: 430 DVYCFTPNGDVKNLPNGSTPVDFAYAIHSAVGNKMIGARVNGRLVNIDYKIQNGDRIEIL 489

Query: 63  TPEDPRS 69
           T ++ + 
Sbjct: 490 TSQNSKG 496


>gi|153854672|ref|ZP_01995922.1| hypothetical protein DORLON_01920 [Dorea longicatena DSM 13814]
 gi|149752776|gb|EDM62707.1| hypothetical protein DORLON_01920 [Dorea longicatena DSM 13814]
          Length = 781

 Score = 40.4 bits (93), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 1/66 (1%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEII 62
           D+    P G +KN P  +T  D A +I  ++  K V   +NGK+ ++   ++ G  IEI+
Sbjct: 437 DVYCFTPQGDVKNLPNGSTPIDFAYAIHSAVGNKMVGARVNGKLVNIDYKIQNGDRIEIL 496

Query: 63  TPEDPR 68
           T ++ +
Sbjct: 497 TSQNSK 502


>gi|149378261|ref|ZP_01895973.1| alanyl-tRNA synthetase [Marinobacter algicola DG893]
 gi|149357458|gb|EDM45968.1| alanyl-tRNA synthetase [Marinobacter algicola DG893]
          Length = 876

 Score = 40.4 bits (93), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 31/129 (24%), Positives = 59/129 (45%), Gaps = 16/129 (12%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H+M  A++++  E     G +++ D   +DF   +  + ++L +IE+++ E I  +
Sbjct: 562 HSATHLMHAALRNVLGEHVTQKGSLVDPDKLRFDFSHFEAVTPEQLREIERQVNEQILDN 621

Query: 134 SPFLKQYLSHEKAR-----ELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           +P   +    E+A+      LF  +K    V +L         ++       +LC G HV
Sbjct: 622 TPVETEITDMEQAQAKGAMALF-GEKYGDTVRVL---------SMGSDAYSVELCGGTHV 671

Query: 189 RSTGQVKKF 197
             TG +  F
Sbjct: 672 ARTGDIGLF 680


>gi|113971943|ref|YP_735736.1| bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis
           pyrophosphate 3'-pyrophosphohydrolase [Shewanella sp.
           MR-4]
 gi|113886627|gb|ABI40679.1| (p)ppGpp synthetase I, SpoT/RelA [Shewanella sp. MR-4]
          Length = 700

 Score = 40.4 bits (93), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 1/68 (1%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIE 60
           P +I +  P+G I   PV+AT  D A  +   +    V   +N +   LS P+  G ++E
Sbjct: 386 PEEIYVFTPEGRILELPVNATAVDFAYEVHTDVGNTCVGARVNRQAYPLSQPLISGQTVE 445

Query: 61  IITPEDPR 68
           IIT +  R
Sbjct: 446 IITAKGAR 453


>gi|262376731|ref|ZP_06069959.1| prolyl-tRNA synthetase [Acinetobacter lwoffii SH145]
 gi|262308441|gb|EEY89576.1| prolyl-tRNA synthetase [Acinetobacter lwoffii SH145]
          Length = 572

 Score = 40.4 bits (93), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 31/143 (21%), Positives = 60/143 (41%), Gaps = 7/143 (4%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG+  W   G ++   + + +R ++ K    ++  P      LW++SG +  Y   +   
Sbjct: 37  SGLYTWLPMGVRVLNKVEAIVREEMDKVGSLQVYMPVTQPASLWEESGRYVQYGPELLRF 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
                  +    F L P +      +  + LKSY++LP    +  + +R+E      G+M
Sbjct: 97  ND-----RHGNPFVLGPTHEEVITDLARNELKSYKQLPANFYQVQTKFRDEIRPRF-GVM 150

Query: 382 RVRGFTQDDAHVFCTKEQMFNEC 404
           R R F   DA+ F   ++   + 
Sbjct: 151 RSREFIMKDAYSFHANQESLQQT 173


>gi|302897411|ref|XP_003047584.1| hypothetical protein NECHADRAFT_85892 [Nectria haematococca mpVI
           77-13-4]
 gi|256728515|gb|EEU41871.1| hypothetical protein NECHADRAFT_85892 [Nectria haematococca mpVI
           77-13-4]
          Length = 1097

 Score = 40.4 bits (93), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 28/103 (27%), Positives = 51/103 (49%), Gaps = 2/103 (1%)

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV- 393
           A++P +       ++  ++S+R+LP+RL ++ SV R E +      +R R F   + H  
Sbjct: 67  AIRPTSEAIMYPYYSKWIRSHRDLPLRLNQWNSVVRWE-TKQTTPFLRTREFLWQEGHTA 125

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
             T+E+   E L+I  L   IY+D     ++    T+ E+  G
Sbjct: 126 HLTEEEAGKEVLEILELYAKIYEDLLAVPVVRGRKTKNERFAG 168


>gi|260584327|ref|ZP_05852074.1| serine--tRNA ligase [Granulicatella elegans ATCC 700633]
 gi|260157845|gb|EEW92914.1| serine--tRNA ligase [Granulicatella elegans ATCC 700633]
          Length = 426

 Score = 40.4 bits (93), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 36/188 (19%), Positives = 76/188 (40%), Gaps = 16/188 (8%)

Query: 242 EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYM--RRKIKDDYEEIN 295
           E + H ++A  +D+          GS  +++   G ++ + + +YM      K  Y E+ 
Sbjct: 136 EPKPHWEVAEALDILDFERGAKVSGSRFLYYKGLGARLERAIYNYMIDLHVEKHGYTEMI 195

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP ++++     +G +  ++ ++F        I D R   L P         + + +   
Sbjct: 196 TPYLVNEQSMYGTGQFPKFKEDVF-------QINDERNLTLIPTAEVPLTNYYANEILEE 248

Query: 356 RELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
            +LP+        +R+E   +     GL+R+  F + +   F T E  F E  K+ +   
Sbjct: 249 AQLPIYFTALSPSFRSEAGSAGRDTRGLIRLHQFNKVEMVKFATPETSFEELEKMTDNAE 308

Query: 413 SIYKDFGF 420
            + +  G 
Sbjct: 309 DVLRGLGL 316


>gi|114045839|ref|YP_736389.1| bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis
           pyrophosphate 3'-pyrophosphohydrolase [Shewanella sp.
           MR-7]
 gi|113887281|gb|ABI41332.1| (p)ppGpp synthetase I, SpoT/RelA [Shewanella sp. MR-7]
          Length = 700

 Score = 40.4 bits (93), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 1/68 (1%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIE 60
           P +I +  P+G I   PV+AT  D A  +   +    V   +N +   LS P+  G ++E
Sbjct: 386 PEEIYVFTPEGRILELPVNATAVDFAYEVHTDVGNTCVGARVNRQAYPLSQPLISGQTVE 445

Query: 61  IITPEDPR 68
           IIT +  R
Sbjct: 446 IITAKGAR 453


>gi|239978415|ref|ZP_04700939.1| alanyl-tRNA synthetase [Streptomyces albus J1074]
 gi|291450311|ref|ZP_06589701.1| alanyl-tRNA synthetase [Streptomyces albus J1074]
 gi|291353260|gb|EFE80162.1| alanyl-tRNA synthetase [Streptomyces albus J1074]
          Length = 890

 Score = 40.4 bits (93), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 69/162 (42%), Gaps = 15/162 (9%)

Query: 68  RSLAVIR-HSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSDELAQIEKK 125
           R  A+ R HS  H+  +A++          G   + G F +DF          L  +E+K
Sbjct: 565 RRRAIARAHSATHLTHQALRDALGPTAAQAGSENQPGRFRFDFGSPAAVPGAVLTDVEQK 624

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF-DLCR 184
           + E++ARD     + +S + A      KK+    E  E     E V +   G++  +LC 
Sbjct: 625 INEVLARDLDVQAEVMSIDDA------KKQGAIAEFGEKY--GERVRVVTIGDFSKELCG 676

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWN 226
           G HV +T Q      L+K+ G    G   R + + +   A+N
Sbjct: 677 GTHVHNTAQ----LGLVKLLGESSIGSGVRRIEALVGVDAYN 714


>gi|205830055|sp|Q0VNK2|SYA_ALCBS RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
          Length = 863

 Score = 40.4 bits (93), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 39/146 (26%), Positives = 65/146 (44%), Gaps = 17/146 (11%)

Query: 68  RSLAVIR-HSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           R LAV+R HS  H+M  A++++  E VQ     +  D   +DF   +  S  +  +IE  
Sbjct: 544 RRLAVMRNHSATHLMHAALRNVLGEHVQQKGSLVSADYLRFDFSHGEAVSEAQREEIEIL 603

Query: 126 MQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +   I  ++    + +  E ARE     LF  K +  +V +L         ++   G   
Sbjct: 604 VNRQILANTAVTTELMDIESAREAGAMALFGEKYDD-QVRVL---------SMGSDGFSK 653

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGA 206
           +LC G HV  TG +  F   ++ + A
Sbjct: 654 ELCGGTHVNRTGDIGLFRITLEASAA 679


>gi|297661955|ref|XP_002809493.1| PREDICTED: bifunctional aminoacyl-tRNA synthetase [Pongo abelii]
          Length = 1462

 Score = 40.4 bits (93), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 48/216 (22%), Positives = 79/216 (36%), Gaps = 39/216 (18%)

Query: 346  AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH-VFCTKEQMFNEC 404
             V+   ++S+R+LP++L ++ +V R E        +R R F   + H  F T E+   E 
Sbjct: 1074 GVWQKWVQSHRDLPIKLNQWCNVVRWEFKHP-QPFLRTREFLWQEGHSAFATMEEAAEEV 1132

Query: 405  LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            L+I +L   +Y++     ++    T  EK  G D             ++   ++S   I 
Sbjct: 1133 LQILDLYAQVYEELLAIPVVKGRKTEKEKFAGGD---------YTTTIEAFISASGRAIQ 1183

Query: 465  TGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIH 524
             G     G  +   FE + +D                 P      Y NS           
Sbjct: 1184 GGTSHHLGQNFSKMFEIVFEDP--------------KTPGEKQFAYQNS----------- 1218

Query: 525  RAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTI 560
               +G   R IG+M      N+ L L P  A V  +
Sbjct: 1219 ---WGLTTRTIGVMTMVHGDNMGLVLPPRVACVQVV 1251


>gi|258545023|ref|ZP_05705257.1| alanine--tRNA ligase [Cardiobacterium hominis ATCC 15826]
 gi|258519721|gb|EEV88580.1| alanine--tRNA ligase [Cardiobacterium hominis ATCC 15826]
          Length = 876

 Score = 40.4 bits (93), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 33/129 (25%), Positives = 62/129 (48%), Gaps = 7/129 (5%)

Query: 68  RSLAVIRH-SCAHIMAEAVQS-IWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           R  A+ RH S  H++ +A++S +   VQ     + E    +DF  ++  S+ ++AQ+E  
Sbjct: 557 RRAAIKRHHSATHLLHKALRSTLGTHVQQKGSLVDERRTRFDFSHDKALSAADIAQVEAM 616

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M   I  ++P + + +S + A+     KK A  +   +       V++   G   +LC G
Sbjct: 617 MNAQILGNAPVVIEQMSRDAAQ-----KKGAMALFGEKYGDVVRVVSMGDDGFSIELCGG 671

Query: 186 PHVRSTGQV 194
            HV   G++
Sbjct: 672 THVGRLGEI 680


>gi|152998903|ref|YP_001364584.1| bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis
           pyrophosphate 3'-pyrophosphohydrolase [Shewanella
           baltica OS185]
 gi|160873483|ref|YP_001552799.1| bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis
           pyrophosphate 3'-pyrophosphohydrolase [Shewanella
           baltica OS195]
 gi|217971568|ref|YP_002356319.1| bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis
           pyrophosphate 3'-pyrophosphohydrolase [Shewanella
           baltica OS223]
 gi|304411696|ref|ZP_07393308.1| (p)ppGpp synthetase I, SpoT/RelA [Shewanella baltica OS183]
 gi|307306252|ref|ZP_07585997.1| (p)ppGpp synthetase I, SpoT/RelA [Shewanella baltica BA175]
 gi|151363521|gb|ABS06521.1| (p)ppGpp synthetase I, SpoT/RelA [Shewanella baltica OS185]
 gi|160859005|gb|ABX47539.1| (p)ppGpp synthetase I, SpoT/RelA [Shewanella baltica OS195]
 gi|217496703|gb|ACK44896.1| (p)ppGpp synthetase I, SpoT/RelA [Shewanella baltica OS223]
 gi|304349884|gb|EFM14290.1| (p)ppGpp synthetase I, SpoT/RelA [Shewanella baltica OS183]
 gi|306911125|gb|EFN41552.1| (p)ppGpp synthetase I, SpoT/RelA [Shewanella baltica BA175]
 gi|315265712|gb|ADT92565.1| (p)ppGpp synthetase I, SpoT/RelA [Shewanella baltica OS678]
          Length = 701

 Score = 40.4 bits (93), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 1/68 (1%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIE 60
           P +I +  P+G I   PV+AT  D A  +   +    V   +N +   LS P+  G ++E
Sbjct: 387 PEEIYVFTPEGRILELPVNATAVDFAYEVHTDVGNTCVGARVNRQAYPLSQPLISGQTVE 446

Query: 61  IITPEDPR 68
           IIT +  R
Sbjct: 447 IITAKGAR 454


>gi|253565674|ref|ZP_04843129.1| prolyl-tRNA synthetase [Bacteroides sp. 3_2_5]
 gi|251945953|gb|EES86360.1| prolyl-tRNA synthetase [Bacteroides sp. 3_2_5]
          Length = 497

 Score = 40.4 bits (93), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 62/299 (20%), Positives = 126/299 (42%), Gaps = 56/299 (18%)

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLK 406
           + + ++SYR+LP+   ++ +V+R E    L   +R   F   + H    T+E+   E ++
Sbjct: 135 YKNWIQSYRDLPILCNQWANVFRWEMRTRL--FLRTAEFLWQEGHTAHATREEAEEEAIR 192

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           + N    +Y +F  EK M                   A  ++KGV      S+ +R    
Sbjct: 193 MLN----VYAEFA-EKYM-------------------AVPVVKGV-----KSANERF--- 220

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
                GA      E +++D  G+  Q GT   +  N    F+  +VN  ++  +   +  
Sbjct: 221 ----AGALDTYTIEAMMQD--GKALQSGTSHFLGQNFAKAFDVQFVNKENKLEY---VWA 271

Query: 526 AVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTITSSAVEY------AQEIANLL 575
             +G   R +G +I     +    LP  L+PIQ ++  I  +  +        + I   L
Sbjct: 272 TSWGVSTRLMGALIMTHSDDNGLVLPPHLAPIQVVIVPIYKNDEQLKLIDAKVEGIVAKL 331

Query: 576 KSHHLSIETD-FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
           K   +S++ D   N+   +K  ++ +K +P+ ++ G ++    ++ + R  +   + V+
Sbjct: 332 KQLGISVKYDNADNKRPGFKFADYELKGVPVRLVMGGRDLENNTMEVMRRDTLEKETVT 390


>gi|193214224|ref|YP_001995423.1| (p)ppGpp synthetase I, SpoT/RelA [Chloroherpeton thalassium ATCC
           35110]
 gi|193087701|gb|ACF12976.1| (p)ppGpp synthetase I, SpoT/RelA [Chloroherpeton thalassium ATCC
           35110]
          Length = 744

 Score = 40.4 bits (93), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 1/58 (1%)

Query: 10  PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPED 66
           P G +K  PV+AT  D A  I   +  + +   +NGK+  L+  ++ G  +EIIT ++
Sbjct: 410 PKGDMKTMPVNATPVDFAFEIHTEVGMRCIGAKVNGKIVSLNSKLKSGDQVEIITSKN 467


>gi|26554308|ref|NP_758242.1| alanyl-tRNA synthetase [Mycoplasma penetrans HF-2]
 gi|81747470|sp|Q8EUR6|SYA_MYCPE RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|26454317|dbj|BAC44646.1| alanyl-tRNA synthetase [Mycoplasma penetrans HF-2]
          Length = 930

 Score = 40.4 bits (93), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 37/152 (24%), Positives = 69/152 (45%), Gaps = 21/152 (13%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII-EDGFY-------YDFDKEQPFSSDEL 119
           R++   +HS  H+M  A++ +       + P I ++G +        DF   +  +  E+
Sbjct: 588 RNIIRKQHSSEHLMHSALKRV-------VSPTIKQEGAFKSIEKITLDFSFNRKLTYKEI 640

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             +EK+++ IIA  +P      + ++A+E+       Y  ++ + I  K  V LY   E 
Sbjct: 641 LGVEKEVKRIIATKNPTQVLMKTLDEAKEM---GAIGYFEQVYKKISGKLRV-LYLCPES 696

Query: 180 FDLCRGPHVRSTGQVKKFF--KLMKVAGAYWR 209
            ++C G HV +TG ++ F    L       WR
Sbjct: 697 IEICGGTHVYNTGDIEDFMVTGLTSKGSGSWR 728


>gi|117922244|ref|YP_871436.1| bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis
           pyrophosphate 3'-pyrophosphohydrolase [Shewanella sp.
           ANA-3]
 gi|117614576|gb|ABK50030.1| (p)ppGpp synthetase I, SpoT/RelA [Shewanella sp. ANA-3]
          Length = 700

 Score = 40.4 bits (93), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 1/68 (1%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIE 60
           P +I +  P+G I   PV+AT  D A  +   +    V   +N +   LS P+  G ++E
Sbjct: 386 PEEIYVFTPEGRILELPVNATAVDFAYEVHTDVGNTCVGARVNRQAYPLSQPLISGQTVE 445

Query: 61  IITPEDPR 68
           IIT +  R
Sbjct: 446 IITAKGAR 453


>gi|325977827|ref|YP_004287543.1| alanyl-tRNA synthetase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|325177755|emb|CBZ47799.1| alaS [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069]
          Length = 872

 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 37/155 (23%), Positives = 71/155 (45%), Gaps = 18/155 (11%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY-YDFDKEQPFSSDELAQIEKKM 126
           R   +  H+  H++  A+ ++  E     G + E+GF  +DF   +  +++EL QIE+++
Sbjct: 560 RHRVIKNHTATHLLHAALHNVIGEHATQAGSLNEEGFLRFDFTHFEAVTAEELRQIEEEV 619

Query: 127 QEIIARDSPF--LKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLC 183
            + I    P   ++  +   K+        E Y           +NV +   G++  +LC
Sbjct: 620 NQQIWNAIPVKTIETDIDTAKSMGAMALFGEKY----------GKNVRVVTIGDYSIELC 669

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLS 218
            G HV +T ++   FK++K  G    G   R +L+
Sbjct: 670 GGTHVSNTAEI-GIFKIVKEEGI---GSGTRRILA 700


>gi|281423902|ref|ZP_06254815.1| alanine--tRNA ligase [Prevotella oris F0302]
 gi|281401990|gb|EFB32821.1| alanine--tRNA ligase [Prevotella oris F0302]
          Length = 887

 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 33/137 (24%), Positives = 61/137 (44%), Gaps = 9/137 (6%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEK 124
           + R+ +   H+  H++  A++ +  +     G  ++     +DF   Q  + +EL Q+EK
Sbjct: 568 EKRNGSAANHTATHLLDYALKQVLGDHVEQKGSYVDPTTLRFDFSHFQKVTDEELRQVEK 627

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
            + ++I  D P        E      E  KE   V +       + V + R G   + C 
Sbjct: 628 LVNKMIREDFPL------DEHRDTPLEEAKELGAVALFGE-KYGDKVRVVRFGPSCEFCG 680

Query: 185 GPHVRSTGQVKKFFKLM 201
           G H +STG++  FFK++
Sbjct: 681 GIHAKSTGRI-GFFKII 696


>gi|125980520|ref|XP_001354284.1| GA11463 [Drosophila pseudoobscura pseudoobscura]
 gi|54642590|gb|EAL31337.1| GA11463 [Drosophila pseudoobscura pseudoobscura]
          Length = 462

 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 37/156 (23%), Positives = 68/156 (43%), Gaps = 12/156 (7%)

Query: 247 RKLAREMDLFHIAEDGSGVIF--WHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHL 304
           +KL  E+ L     +G+  I     R   K    +   M+R      ++I+ P +    L
Sbjct: 30  QKLLTELGLVKSGSNGTYQIMPIAQRSVDKFIDLVDGNMKRA---GGQKISLPILTPTGL 86

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLA 363
           W+++G  +   +  + V+      +  + F + P +     A+       SYR++P+RL 
Sbjct: 87  WKKTGRLEGDISEFYMVR-----DRSGKQFLMSPTHEEAVTAMLATTAPISYRQMPLRLY 141

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQ 399
           + G  +R+E   S  GLMR + F   D + F   E+
Sbjct: 142 QIGPKFRDELK-SRFGLMRAKEFLMKDMYTFDVSEE 176


>gi|257059315|ref|YP_003137203.1| alanyl-tRNA synthetase [Cyanothece sp. PCC 8802]
 gi|256589481|gb|ACV00368.1| alanyl-tRNA synthetase [Cyanothece sp. PCC 8802]
          Length = 879

 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 61/135 (45%), Gaps = 15/135 (11%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIAR- 132
           H+  H++  A++ +  E     G +++ D   +DF+  +  +S EL +IE  +   IA  
Sbjct: 564 HTATHLLQAALKKVVDESISQAGSLVDFDRLRFDFNCPRSITSAELQEIEALINTWIAEA 623

Query: 133 -DSPFLKQYLSHEKARELFESKKEAYKVEI-LESIPAKENVTLYRQGEWFDLCRGPHVRS 190
            D+      L   KA+       E Y  E+ +  +P          G   +LC G HV++
Sbjct: 624 HDTQVSIMDLEKAKAKGAIAMFGEKYSAEVRVIDVP----------GVSMELCGGTHVKN 673

Query: 191 TGQVKKFFKLMKVAG 205
           T ++   FK+M  +G
Sbjct: 674 TAEI-GLFKIMSESG 687


>gi|110802270|ref|YP_699214.1| GTP pyrophosphokinase [Clostridium perfringens SM101]
 gi|110682771|gb|ABG86141.1| GTP pyrophosphokinase [Clostridium perfringens SM101]
          Length = 726

 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 1/60 (1%)

Query: 10  PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI-EIITPEDPR 68
           P G + N PV AT  D A  I   +  K V   +NGK+  L   ++ G I EI+T    R
Sbjct: 394 PKGVVINLPVGATPLDFAYKIHTDIGNKCVGAKVNGKIVTLDYKLKTGEIVEILTSSSSR 453


>gi|120600557|ref|YP_965131.1| bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis
           pyrophosphate 3'-pyrophosphohydrolase [Shewanella sp.
           W3-18-1]
 gi|146294715|ref|YP_001185139.1| bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis
           pyrophosphate 3'-pyrophosphohydrolase [Shewanella
           putrefaciens CN-32]
 gi|120560650|gb|ABM26577.1| (p)ppGpp synthetase I, SpoT/RelA [Shewanella sp. W3-18-1]
 gi|145566405|gb|ABP77340.1| (p)ppGpp synthetase I, SpoT/RelA [Shewanella putrefaciens CN-32]
 gi|319427950|gb|ADV56024.1| (p)ppGpp synthetase I, SpoT/RelA [Shewanella putrefaciens 200]
          Length = 701

 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 1/68 (1%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIE 60
           P +I +  P+G I   PV+AT  D A  +   +    V   +N +   LS P+  G ++E
Sbjct: 387 PEEIYVFTPEGRILELPVNATAVDFAYEVHTDVGNTCVGARVNRQAYPLSQPLISGQTVE 446

Query: 61  IITPEDPR 68
           IIT +  R
Sbjct: 447 IITAKGAR 454


>gi|301320495|gb|ADK69138.1| proline--tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str.
           Gladysdale]
          Length = 474

 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 76/372 (20%), Positives = 145/372 (38%), Gaps = 60/372 (16%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAV 321
           G + +   G++I++ +  Y+  + K  + + +  P ++ + L+ ++  H + +   +  V
Sbjct: 36  GTMIFRPYGYRIWELIQKYLDEEFKKVNVDNVYFPLLIPESLFNKEKDHIEGFSPEIATV 95

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
                   +   F ++P +    +  F++ + SYR+LP+   ++ +V R E +      +
Sbjct: 96  TRVGQKKLEENLF-IRPTSEVVMMDYFSNEINSYRDLPLIYNQWCNVMRWEKTT--RPFL 152

Query: 382 RVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           R   F   + H V  +  +  N CLKI N+     K+     ++    T  EK       
Sbjct: 153 RTSEFLWQEGHTVHSSYNEAENFCLKILNIYEKFAKEILLLPVICGKKTEKEK------- 205

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAI--GRDWQCGTIQV 498
                                            F G K  Y ++  +  G+  QCGT   
Sbjct: 206 ---------------------------------FAGAKDTYTIESLMFDGQALQCGTSHF 232

Query: 499 -DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPI 553
              N    ++  + N  ++  H    +   +G   R IG +I     +    LP  +SPI
Sbjct: 233 FADNFTKVYDIKFQNKENKLEHA---YSTSWGVSTRLIGALIMTHSDDNGLVLPSKISPI 289

Query: 554 QAIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
           Q  +  I  T    +  + I + L  +   I+ D  +++  +KI E  IK IPI I  G 
Sbjct: 290 QIQIIQIKNTEQIDQVVENIKDKLSDYR--IDVDNSDKSFGFKISEAEIKGIPIRIEIGP 347

Query: 612 KEASERSIGIRR 623
           ++     I I R
Sbjct: 348 RDLENNQITISR 359


>gi|271963639|ref|YP_003337835.1| proline--tRNA ligase [Streptosporangium roseum DSM 43021]
 gi|270506814|gb|ACZ85092.1| Proline--tRNA ligase [Streptosporangium roseum DSM 43021]
          Length = 580

 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 38/163 (23%), Positives = 73/163 (44%), Gaps = 24/163 (14%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E   H+ L R   +  +A    G+  W   G  + + +   +R ++ +   +E+  P 
Sbjct: 19  DAEVPSHKLLVRAGYVRRVA---PGIYSWLPLGKMVLENVTRIVREEMNRMGGQEVLFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAV---KCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-- 353
           +L +  ++ +G W  Y   +F +   K AD        + L P     H  +F   +K  
Sbjct: 76  LLPREYYEATGRWTEYGDTLFRLQDRKGAD--------YLLGPT----HEEMFTDMVKGE 123

Query: 354 --SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
             SY++ PV L +  + YR+E +    G++R R F   D++ F
Sbjct: 124 YSSYKDYPVTLYQIQTKYRDE-ARPRAGILRGREFVMKDSYSF 165


>gi|119478765|ref|ZP_01618604.1| alanyl-tRNA synthetase [marine gamma proteobacterium HTCC2143]
 gi|119448344|gb|EAW29599.1| alanyl-tRNA synthetase [marine gamma proteobacterium HTCC2143]
          Length = 874

 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 30/141 (21%), Positives = 59/141 (41%), Gaps = 14/141 (9%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSD 117
           + +   E+ R    + HS  H++  A++ +  +     G +++     +DF   +  ++D
Sbjct: 546 VSVQVDENVRQATTLNHSATHLLHAALRQVLGDHVTQKGSLVDSKKLRFDFSHFEGLTAD 605

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKAREL----FESKKEAYKVEILESIPAKENVTL 173
           +LA+IE  + + I  +S         + A EL       +K   +V +L          +
Sbjct: 606 QLAEIETIVNQHIRHNSEVTTTVTDMDHASELGAMMLFGEKYGDQVRVL---------AM 656

Query: 174 YRQGEWFDLCRGPHVRSTGQV 194
              G   +LC G HV  TG +
Sbjct: 657 GDDGFSTELCGGTHVSRTGNI 677


>gi|53802423|ref|YP_112920.1| alanyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
 gi|59798499|sp|Q60BS6|SYA_METCA RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|53756184|gb|AAU90475.1| alanyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
          Length = 867

 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 31/140 (22%), Positives = 64/140 (45%), Gaps = 11/140 (7%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKM 126
           R    + HS  H++  A++ +  E     G +++ +   +DF   +P S ++L +IE+ +
Sbjct: 547 RLATALNHSATHLLHAALRRVLGEHVTQKGSLVDPERLRFDFSHFEPVSPEQLDEIERLV 606

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRG 185
              I R++    + ++ + A  L        K          ++V + R G++  +LC G
Sbjct: 607 NREIRRNAEVTAEVMAKDAAMRLGAMALFGEKY--------GDDVRVLRIGDFSTELCGG 658

Query: 186 PHVRSTGQVKKFFKLMKVAG 205
            H R  G +   FK++  +G
Sbjct: 659 IHARRAGDI-GLFKIVSESG 677


>gi|295425887|ref|ZP_06818566.1| serine--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
 gi|295064429|gb|EFG55358.1| serine--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
          Length = 462

 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 34/172 (19%), Positives = 73/172 (42%), Gaps = 5/172 (2%)

Query: 262 GSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           G+  +F+   G  + + + ++ +    K+ Y EI  P +++    Q +G +  +  +++ 
Sbjct: 187 GARFVFYKGAGALLERAVFNFFLDENTKEGYTEIIPPYLVNDASMQGTGQFPKFHEDVYT 246

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---L 377
           +   DD  K  R   L P      V  F   +    +LP+ +      +R+E   +    
Sbjct: 247 IVDNDDPDKP-RDLTLIPTAEVPLVNYFRDEIIHGEKLPINVTALSPAFRSEAGSAGRDT 305

Query: 378 HGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
            GL+R+  F + +    C  E  +++  K+ +    + +  G    +V LST
Sbjct: 306 RGLIRMHEFRKVEMVKVCKPEDSWDQLEKLTHNAEHLLQKLGLPYHVVALST 357


>gi|282908937|ref|ZP_06316755.1| alanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282911255|ref|ZP_06319057.1| alanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|295428195|ref|ZP_06820827.1| alanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|297590838|ref|ZP_06949476.1| alanine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|282324950|gb|EFB55260.1| alanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282327201|gb|EFB57496.1| alanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|295128553|gb|EFG58187.1| alanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|297575724|gb|EFH94440.1| alanine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|312437914|gb|ADQ76985.1| alanine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH60]
          Length = 877

 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 17/137 (12%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++  A++S+  +     G ++E D   +DF    P ++DE+ Q+E+ + E I + 
Sbjct: 566 HSATHLLHAALKSVLGDHVNQAGSLVEADRLRFDFSHFGPMTNDEIDQVERLVNEEIWKG 625

Query: 134 SPFLKQYLSHEKAREL----FESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
                Q +    A+E+       +K    V ++   P              +LC G HVR
Sbjct: 626 IDVNIQEMDIVSAKEMGAMALFGEKYGDVVRVVNMAPFS-----------IELCGGIHVR 674

Query: 190 STGQVKKFFKLMKVAGA 206
           +T ++   FK++  +G 
Sbjct: 675 NTSEI-GLFKIVSESGT 690


>gi|222151505|ref|YP_002560661.1| alanyl-tRNA synthetase homolog [Macrococcus caseolyticus JCSC5402]
 gi|222120630|dbj|BAH17965.1| alanyl-tRNA synthetase homolog [Macrococcus caseolyticus JCSC5402]
          Length = 874

 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 33/141 (23%), Positives = 67/141 (47%), Gaps = 11/141 (7%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKM 126
           R+  +  HS  H+M +A++ +    V  A   +  +   +DF    P + +E+A++E+ +
Sbjct: 557 RTFVIKNHSATHLMHQALKDVLGTHVNQAGSLVTPERLRFDFSHFGPVTKEEIAKVEQIV 616

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRG 185
            E I ++         H +  E+  S+ +A     L      + V +    ++  +LC G
Sbjct: 617 NEKIWQNI--------HVEINEMPISEAKAKGAMALFGEKYGDIVRVVEMSDYSIELCGG 668

Query: 186 PHVRSTGQVKKFFKLMKVAGA 206
            HVR+TG++   FK++  +G 
Sbjct: 669 VHVRNTGEI-GLFKIVSESGT 688


>gi|49483863|ref|YP_041087.1| alanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|257425743|ref|ZP_05602167.1| alanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257428403|ref|ZP_05604801.1| alanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257431041|ref|ZP_05607420.1| alanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 68-397]
 gi|257433727|ref|ZP_05610085.1| alanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus E1410]
 gi|257436642|ref|ZP_05612686.1| alanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876]
 gi|282904199|ref|ZP_06312087.1| alanine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|282906025|ref|ZP_06313880.1| alanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282914423|ref|ZP_06322209.1| alanine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282919393|ref|ZP_06327128.1| alanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427]
 gi|282924718|ref|ZP_06332386.1| alanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101]
 gi|283958379|ref|ZP_06375830.1| alanine--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|293503498|ref|ZP_06667345.1| alanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 58-424]
 gi|293510515|ref|ZP_06669221.1| alanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809]
 gi|293531055|ref|ZP_06671737.1| alanine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|56749413|sp|Q6GG85|SYA_STAAR RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|49241992|emb|CAG40689.1| putative alanyl-tRNA synthetase [Staphylococcus aureus subsp.
           aureus MRSA252]
 gi|257271437|gb|EEV03583.1| alanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257275244|gb|EEV06731.1| alanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257278244|gb|EEV08886.1| alanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 68-397]
 gi|257281820|gb|EEV11957.1| alanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus E1410]
 gi|257283993|gb|EEV14116.1| alanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876]
 gi|282313553|gb|EFB43948.1| alanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101]
 gi|282317203|gb|EFB47577.1| alanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427]
 gi|282321604|gb|EFB51929.1| alanine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282331317|gb|EFB60831.1| alanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282595817|gb|EFC00781.1| alanine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|283790528|gb|EFC29345.1| alanine--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|290920323|gb|EFD97389.1| alanine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|291095164|gb|EFE25429.1| alanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 58-424]
 gi|291466879|gb|EFF09399.1| alanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809]
 gi|315195518|gb|EFU25905.1| putative alanyl-tRNA synthetase [Staphylococcus aureus subsp.
           aureus CGS00]
          Length = 876

 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 17/137 (12%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++  A++S+  +     G ++E D   +DF    P ++DE+ Q+E+ + E I + 
Sbjct: 565 HSATHLLHAALKSVLGDHVNQAGSLVEADRLRFDFSHFGPMTNDEIDQVERLVNEEIWKG 624

Query: 134 SPFLKQYLSHEKAREL----FESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
                Q +    A+E+       +K    V ++   P              +LC G HVR
Sbjct: 625 IDVNIQEMDIVSAKEMGAMALFGEKYGDVVRVVNMAPFS-----------IELCGGIHVR 673

Query: 190 STGQVKKFFKLMKVAGA 206
           +T ++   FK++  +G 
Sbjct: 674 NTSEI-GLFKIVSESGT 689


>gi|269837587|ref|YP_003319815.1| alanyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
 gi|269786850|gb|ACZ38993.1| alanyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
          Length = 879

 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 70/156 (44%), Gaps = 24/156 (15%)

Query: 54  VREGSIEIITPEDPRSLAVIR------HSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYY 106
           VREG I++    + R  A  R      H+  H++  A++ +  E VQ A   +  D   +
Sbjct: 538 VREGYIQVGQTAEARVDAQRRADIRRNHTATHLLHTALRRVLGEHVQQAGSLVAPDRLRF 597

Query: 107 DFDKEQPFSSDELAQIEKKMQEIIARDSPF---LKQYLS--HEKARELFESKKEAYKVEI 161
           DF   +P  +  L ++++ + + I  DSP    +K Y     E A  LF  +K    V +
Sbjct: 598 DFTSLEPVGAAALREVQEIVNQQILADSPVQAEIKPYQEAIAEGAIALF-GEKYGDNVRV 656

Query: 162 LESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
           + +IP+             +LC G HV  TG++  F
Sbjct: 657 V-TIPSFSK----------ELCGGTHVNHTGEIGLF 681


>gi|260831390|ref|XP_002610642.1| hypothetical protein BRAFLDRAFT_117885 [Branchiostoma floridae]
 gi|229296009|gb|EEN66652.1| hypothetical protein BRAFLDRAFT_117885 [Branchiostoma floridae]
          Length = 1596

 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 65/321 (20%), Positives = 116/321 (36%), Gaps = 58/321 (18%)

Query: 334  FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH- 392
             A++P +       +   +KS+R+LP++  ++ +V R E        +R R F   + H 
Sbjct: 1198 IAIRPTSETVMYPAYAKWIKSHRDLPIKYNQWNNVVRWEFKHP-QPFLRTREFLWQEGHS 1256

Query: 393  VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
             F +K++   E + I  L   +Y+D     ++    T  EK  G D             +
Sbjct: 1257 AFASKDEADEEVMAILELYARVYEDLMAIPVIRGRKTEKEKFAGGD---------YTTTV 1307

Query: 453  DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
            +   ++S   I        G  +   FE + +D                 P      Y N
Sbjct: 1308 EVYISASGRAIQGATSHHLGQNFSKMFEIVYEDP--------------EKPGEKKFVYQN 1353

Query: 513  SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQA------IVTTITSSAVE 566
            S              +G   R IG+M+     N  L + P+ A      I   +T+S  E
Sbjct: 1354 S--------------WGITTRTIGVMVMVHGDNKGLVVPPVVARDQVVVIPCGVTASLPE 1399

Query: 567  --------YAQEIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASER 617
                      QE    L+   +    D R N +  +K     +K  PI +  G ++  + 
Sbjct: 1400 EDKQKLMKKCQEYRQALRDAGIRATDDLRDNYSPGWKFNHWELKGTPIRMEVGPRDMKQN 1459

Query: 618  S-IGIRRFGSTTTQKVSLLDA 637
              + +RR    T +K++L + 
Sbjct: 1460 QFVAVRR---DTGEKMTLAEG 1477


>gi|86606529|ref|YP_475292.1| alanyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
 gi|123738092|sp|Q2JTG8|SYA_SYNJA RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|86555071|gb|ABD00029.1| alanyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
          Length = 883

 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 36/142 (25%), Positives = 60/142 (42%), Gaps = 15/142 (10%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKM 126
           R  A   H+  H++  A++ +  P +  A   +  D   +DF   +P + +EL Q+E  +
Sbjct: 557 RRRAQAHHTATHLLQAALKKVVDPSISQAGSLVAFDRLRFDFTLSRPLTPEELQQVEDLV 616

Query: 127 QEIIARDSPFLKQY--LSHEKARELFESKKEAYKVEI-LESIPAKENVTLYRQGEWFDLC 183
              IA   P       L+  KAR       E Y  E+ +   P          G   +LC
Sbjct: 617 NTWIAEAHPAQVSIMPLAEAKARGAIAMFGEKYGAEVRVVDFP----------GVSMELC 666

Query: 184 RGPHVRSTGQVKKFFKLMKVAG 205
            G HV +T ++   FK++  +G
Sbjct: 667 GGTHVSNTAEI-GLFKIISESG 687


>gi|299141813|ref|ZP_07034948.1| alanine--tRNA ligase [Prevotella oris C735]
 gi|298576664|gb|EFI48535.1| alanine--tRNA ligase [Prevotella oris C735]
          Length = 886

 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 33/137 (24%), Positives = 61/137 (44%), Gaps = 9/137 (6%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEK 124
           + R+ +   H+  H++  A++ +  +     G  ++     +DF   Q  + +EL Q+EK
Sbjct: 567 EKRNGSAANHTATHLLDYALKQVLGDHVEQKGSYVDPTTLRFDFSHFQKVTEEELRQVEK 626

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
            + ++I  D P        E      E  KE   V +       + V + R G   + C 
Sbjct: 627 LVNKMIREDFPL------DEHRDTPLEEAKELGAVALFGE-KYGDKVRVVRFGPSCEFCG 679

Query: 185 GPHVRSTGQVKKFFKLM 201
           G H +STG++  FFK++
Sbjct: 680 GIHAKSTGRI-GFFKII 695


>gi|195570682|ref|XP_002103333.1| GD19014 [Drosophila simulans]
 gi|194199260|gb|EDX12836.1| GD19014 [Drosophila simulans]
          Length = 417

 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 52/233 (22%), Positives = 101/233 (43%), Gaps = 23/233 (9%)

Query: 229 QELTQYLY--FLEESEKRDHRKLAREMDLFHIAEDG--SGVIFWHRKGW--KIFQTLISY 282
           +EL QY++     +S  ++  +LAR ++L+ +   G  +G   ++  G    + Q +I Y
Sbjct: 101 RELAQYVHRQLPPQSSLKEFSELARALNLYRMDHLGNYTGHKSYYLTGQLATLEQAIIQY 160

Query: 283 MRRKIKD-DYEEINTPQVLDQHLWQQSG-HWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
             + + D  ++ I+ P +L + + +  G   +  R  ++ +   +  +      AL    
Sbjct: 161 ALQAVTDHGFKLISVPDILPKEVIESCGMRTEGERTQVYKLDTGE-CLSGTSEMAL---- 215

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG--SLHGLMRVRGFTQDDAHVFCTKE 398
                  F + L S  +LP+++      YR E SG     G+ RV  F + +    CT+E
Sbjct: 216 ----AGFFANKLLSEDQLPLKVTAVSRCYRAETSGLQEEKGIYRVHQFNKVEMFAICTEE 271

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWD-DAENIMKG 450
           Q   E  +  N+ + +++  G      +L   P   +G+ A    D E  M G
Sbjct: 272 QSEAELEEFKNIEVDLFRRLGLN---FRLLDMPPCELGAPAYQKYDIEAWMPG 321


>gi|271501699|ref|YP_003334725.1| alanyl-tRNA synthetase [Dickeya dadantii Ech586]
 gi|270345254|gb|ACZ78019.1| alanyl-tRNA synthetase [Dickeya dadantii Ech586]
          Length = 875

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 36/165 (21%), Positives = 68/165 (41%), Gaps = 23/165 (13%)

Query: 43  INGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIED 102
           +N KV  + D VR   I +             HS  H++  A++ +  E     G ++ D
Sbjct: 544 VNDKVNAVVDHVRRDRIRL------------NHSATHLLHAALRQVLGEHVAQKGSLVND 591

Query: 103 GFY-YDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEI 161
            +  +DF   +    +++ Q+E  +   I R+       ++ + AR        A     
Sbjct: 592 NYLRFDFSHPEAMKPEQIRQVEDIVNTQIRRNLSIDTDVMALDAAR--------AKGAMA 643

Query: 162 LESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKFFKLMKVAG 205
           L      E+V +   G++  +LC G H R TG +   F+++  +G
Sbjct: 644 LFGEKYDEHVRVLSMGDFSIELCGGTHARRTGDI-GLFRIVSESG 687


>gi|241765465|ref|ZP_04763432.1| alanyl-tRNA synthetase [Acidovorax delafieldii 2AN]
 gi|241364775|gb|EER59764.1| alanyl-tRNA synthetase [Acidovorax delafieldii 2AN]
          Length = 874

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 64/143 (44%), Gaps = 18/143 (12%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKM 126
           R+  +  HS  H+M +A++ +    VQ     +  D   +DF      ++ E+ +IE+++
Sbjct: 556 RAATMRNHSVTHLMHKALREVLGSHVQQKGSLVNADRTRFDFAHNAAVTNAEIREIERRV 615

Query: 127 QEIIARDSPFLKQYLSHEKARE----LFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
            E I  + P   + +  E A++    +   +K    V +L+   ++E            L
Sbjct: 616 NEEILANQPTQARVMDIESAQKTGAMMLFGEKYGETVRVLDIGTSRE------------L 663

Query: 183 CRGPHVRSTGQVKKFFKLMKVAG 205
           C G HV+ TG +   FK++   G
Sbjct: 664 CGGTHVQRTGDI-GLFKVVSEGG 685


>gi|239908231|ref|YP_002954972.1| GTP pyrophosphokinase [Desulfovibrio magneticus RS-1]
 gi|239798097|dbj|BAH77086.1| GTP pyrophosphokinase [Desulfovibrio magneticus RS-1]
          Length = 740

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 1/60 (1%)

Query: 10  PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPR 68
           P G +K  P  AT  D+A  I  ++ +      +NGK+  L  P++ G ++EIIT ++ R
Sbjct: 394 PKGDVKELPEGATAVDLAFLIHTAVGEHCAGAKVNGKLVPLETPLKNGDTVEIITDKNRR 453


>gi|209523613|ref|ZP_03272167.1| alanyl-tRNA synthetase [Arthrospira maxima CS-328]
 gi|209496018|gb|EDZ96319.1| alanyl-tRNA synthetase [Arthrospira maxima CS-328]
          Length = 876

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 35/139 (25%), Positives = 61/139 (43%), Gaps = 9/139 (6%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKM 126
           R  A   H+  H++  A++ I  P +  A   +  D   +DF+  +  +++EL Q+E ++
Sbjct: 555 RRRAQANHTATHLLQAALKLIVDPGISQAGSLVAFDRLRFDFNCPRALTTEELQQVENQV 614

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGP 186
              IA   P     ++ E      E+K +       E   A   V  Y  G   +LC G 
Sbjct: 615 NSWIAEAHPATVTQMALE------EAKNKGAIAMFGEKYAAVVRVVDY-PGVSMELCGGT 667

Query: 187 HVRSTGQVKKFFKLMKVAG 205
           HV +T ++   FK++   G
Sbjct: 668 HVTNTAEI-GLFKIVSETG 685


>gi|254447045|ref|ZP_05060512.1| prolyl-tRNA synthetase [gamma proteobacterium HTCC5015]
 gi|198263184|gb|EDY87462.1| prolyl-tRNA synthetase [gamma proteobacterium HTCC5015]
          Length = 522

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +    LWQ+SG  + Y   +  +     + +  R F   P +      +    +
Sbjct: 20  ELLMPTIQPTELWQESGRLEQYGPELLRL-----SDRHERPFCYGPTHEEVITDLARREI 74

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           KSY++LPV   +    +R+E      G+MR R F   DA+ F
Sbjct: 75  KSYKQLPVNFYQIQLKFRDEIRPRF-GVMRAREFVMKDAYSF 115


>gi|187778850|ref|ZP_02995323.1| hypothetical protein CLOSPO_02445 [Clostridium sporogenes ATCC
           15579]
 gi|187772475|gb|EDU36277.1| hypothetical protein CLOSPO_02445 [Clostridium sporogenes ATCC
           15579]
          Length = 879

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 36/149 (24%), Positives = 73/149 (48%), Gaps = 21/149 (14%)

Query: 65  EDPRSLAVIRHSCAHIM-AEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           E+ R+     H+  HI+ A  ++ +   VQ +   + ++   +DF   +  S  EL ++E
Sbjct: 556 EERRNNIRKNHTATHILHAALIKVVGDHVQQSGSYVDDERLRFDFSHFEAVSEAELKEVE 615

Query: 124 KKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGE 178
           K + + I + +    + ++ E+A+E     LF++K              K++V +   GE
Sbjct: 616 KIVNKEIMKANVVNTKVMNIEEAKEQGAIALFDNK-------------YKDDVRVVSVGE 662

Query: 179 WF-DLCRGPHVRSTGQVKKFFKLMKVAGA 206
           +  +LC G HV ++G++   FK++  AG 
Sbjct: 663 FSKELCGGTHVGNSGEI-GMFKIVSEAGV 690


>gi|313891768|ref|ZP_07825373.1| alanine--tRNA ligase [Dialister microaerophilus UPII 345-E]
 gi|313119762|gb|EFR42949.1| alanine--tRNA ligase [Dialister microaerophilus UPII 345-E]
          Length = 869

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 44/197 (22%), Positives = 78/197 (39%), Gaps = 21/197 (10%)

Query: 14  IKNFPVHATGSDVAESISRSLAKKAVAVAINGK-----VCDLSDPVREGSI------EII 62
           +KN P HA G      I        V    N K     +  L   + EG I      E+ 
Sbjct: 484 LKNNPFHAEGGGQMGDIGILRNSSGVFEVHNTKKLPDGIVYLIGTITEGKISVNDMVEVK 543

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQ 121
                R+     H+  H++  A++ +  +     G ++  D   +DF   +P ++ ++  
Sbjct: 544 VDRVRRAALAKNHTGTHLLHAALRQVLGKQATQAGSLVAPDHLRFDFTWNEPLTAKQIND 603

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-F 180
           +EK + E I        + +  E+AR       +A  + +      K  V + R G++  
Sbjct: 604 VEKLVNEKILGSLTLTTKEVPLEEAR-------KAGALALFGEKYGK-IVRMVRIGDFSL 655

Query: 181 DLCRGPHVRSTGQVKKF 197
           +LC G H  +TG+V  F
Sbjct: 656 ELCGGSHTHTTGEVGSF 672


>gi|332529232|ref|ZP_08405196.1| alanyl-tRNA synthetase [Hylemonella gracilis ATCC 19624]
 gi|332041455|gb|EGI77817.1| alanyl-tRNA synthetase [Hylemonella gracilis ATCC 19624]
          Length = 888

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 35/140 (25%), Positives = 62/140 (44%), Gaps = 11/140 (7%)

Query: 68  RSLAVIR-HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKK 125
           R  A +R HS  H+M +A+  +        G +++ D   +DF    P +  ++A+IE++
Sbjct: 565 RRAATMRNHSVTHLMHKALHEVLGAHVQQKGSLVDADKTRFDFTHNAPVTPAQIAEIERR 624

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           + E I  +S    + L  E A+        A    +L      + V +   G   + C G
Sbjct: 625 VNEEILANSATQARVLDIEAAK--------ATGAVMLFGEKYGDTVRVLDIGTSREFCGG 676

Query: 186 PHVRSTGQVKKFFKLMKVAG 205
            HV  TG +   FK++  +G
Sbjct: 677 THVPRTGDI-GLFKIVGESG 695


>gi|306833055|ref|ZP_07466186.1| alanine--tRNA ligase [Streptococcus bovis ATCC 700338]
 gi|304424764|gb|EFM27899.1| alanine--tRNA ligase [Streptococcus bovis ATCC 700338]
          Length = 888

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 37/155 (23%), Positives = 71/155 (45%), Gaps = 18/155 (11%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY-YDFDKEQPFSSDELAQIEKKM 126
           R   +  H+  H++  A+ ++  E     G + E+GF  +DF   +  +++EL QIE+++
Sbjct: 576 RHRVIKNHTATHLLHAALHNVIGEHATQAGSLNEEGFLRFDFTHFEAVTAEELRQIEEEV 635

Query: 127 QEIIARDSPF--LKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLC 183
            + I    P   ++  +   K+        E Y           +NV +   G++  +LC
Sbjct: 636 NQQIWNAIPVKTIETDIDTAKSMGAMALFGEKY----------GKNVRVVTIGDYSIELC 685

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLS 218
            G HV +T ++   FK++K  G    G   R +L+
Sbjct: 686 GGTHVSNTAEI-GIFKIVKEEGI---GSGTRRILA 716


>gi|218246265|ref|YP_002371636.1| alanyl-tRNA synthetase [Cyanothece sp. PCC 8801]
 gi|218166743|gb|ACK65480.1| alanyl-tRNA synthetase [Cyanothece sp. PCC 8801]
          Length = 879

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 61/135 (45%), Gaps = 15/135 (11%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIAR- 132
           H+  H++  A++ +  E     G +++ D   +DF+  +  +S EL +IE  +   IA  
Sbjct: 564 HTATHLLQAALKKVVDESISQAGSLVDFDRLRFDFNCPRSITSAELQEIEALINTWIAEA 623

Query: 133 -DSPFLKQYLSHEKARELFESKKEAYKVEI-LESIPAKENVTLYRQGEWFDLCRGPHVRS 190
            D+      L   KA+       E Y  E+ +  +P          G   +LC G HV++
Sbjct: 624 HDTQVSIMDLEKAKAKGAIAMFGEKYSAEVRVIDVP----------GVSMELCGGTHVKN 673

Query: 191 TGQVKKFFKLMKVAG 205
           T ++   FK+M  +G
Sbjct: 674 TAEI-GLFKIMSESG 687


>gi|189217492|ref|NP_001121216.1| hypothetical protein LOC100158287 [Xenopus laevis]
 gi|169642429|gb|AAI60714.1| LOC100158287 protein [Xenopus laevis]
          Length = 655

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 2/106 (1%)

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
            A++P +       +   ++S+R+LP++L ++ +V R E        +R R F   + H 
Sbjct: 259 IAVRPTSETVMYPAYAKWVQSHRDLPIKLNQWCNVVRWEFKHP-QPFLRTREFLWQEGHT 317

Query: 394 -FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD 438
            F T E+   E L+I +L   +Y+D     ++    T  EK  G D
Sbjct: 318 AFATYEEAAEEVLQILDLYARVYEDLLAIPVVKGRKTEKEKFAGGD 363


>gi|167771535|ref|ZP_02443588.1| hypothetical protein ANACOL_02905 [Anaerotruncus colihominis DSM
           17241]
 gi|167666175|gb|EDS10305.1| hypothetical protein ANACOL_02905 [Anaerotruncus colihominis DSM
           17241]
          Length = 728

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 1/63 (1%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IE 60
           P ++ +  P G + + PV +T  D A +I   +  + V   I+G++  L  PVR G  IE
Sbjct: 386 PEEVFVFTPKGDVISLPVGSTVIDFAYAIHTEVGNRMVGAKIDGRIVALDTPVRTGQIIE 445

Query: 61  IIT 63
           ++T
Sbjct: 446 VVT 448


>gi|329120448|ref|ZP_08249113.1| alanine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
 gi|327461906|gb|EGF08236.1| alanine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
          Length = 992

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 41/169 (24%), Positives = 75/169 (44%), Gaps = 25/169 (14%)

Query: 71  AVIR-HSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQP--FSSDELAQIEKKMQ 127
           A++R HS  H+M +A++ +     V     +++     FD   P   S++E+A++E+++ 
Sbjct: 676 AIMRNHSVTHLMHKALRDVLG-THVEQKGSLQNAELTRFDISHPQGISAEEIAEVERRVN 734

Query: 128 EIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEW-FD 181
             I  + P   + +S E A++     LF  K   +             V +   G++  +
Sbjct: 735 AAIIANVPVKVETMSIEDAQKSGAVMLFGEKYGDF-------------VRVITMGDYSIE 781

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQE 230
           LC G HV  TG +  FFK++   G    G      ++ +   AW   QE
Sbjct: 782 LCGGTHVTRTGDI-GFFKIIS-EGGIAAGIRRVEAITGLAALAWAQNQE 828


>gi|255532429|ref|YP_003092801.1| alanyl-tRNA synthetase [Pedobacter heparinus DSM 2366]
 gi|255345413|gb|ACU04739.1| alanyl-tRNA synthetase [Pedobacter heparinus DSM 2366]
          Length = 900

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 40/169 (23%), Positives = 77/169 (45%), Gaps = 24/169 (14%)

Query: 44  NGKVCDLSDPVRE---GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII 100
           NG +   +D + E   G    +  E+ R L+   H+  H++  A++ +        G ++
Sbjct: 554 NGVIVHYADTLPEDIEGHFWAVIDENKRLLSQDNHTATHLLHAALKKVLGSHVNQKGSLV 613

Query: 101 E-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQ-YLSHEKA-----RELF-ES 152
             D   +DF      + +EL+QIE  + + I  + P  +Q Y+ +++A       LF E 
Sbjct: 614 NPDYLRFDFSHFARVTDEELSQIEHLVNQKIRENIPLKEQRYVPYDQAISSGVTALFGEK 673

Query: 153 KKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLM 201
             +  ++   +   +KE            LC G HV++TGQ+  +FK++
Sbjct: 674 YGDLVRIITFDDHYSKE------------LCGGTHVQATGQI-GYFKII 709


>gi|257414233|ref|ZP_05591947.1| uridine kinase [Roseburia intestinalis L1-82]
 gi|257200735|gb|EEU99019.1| uridine kinase [Roseburia intestinalis L1-82]
          Length = 344

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 40/189 (21%), Positives = 76/189 (40%), Gaps = 7/189 (3%)

Query: 15  KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVI 73
           K +P   +   +A+          V    N ++ +L   V+ +G +  +T  D       
Sbjct: 20  KTYPAGVSFLSIAQEYQDQYEDDIVLALYNNRLRELKKTVKKDGELSFLTTSDKTGKRAY 79

Query: 74  RHSCAHIMAEAVQSIW--PEVQVAIGPIIEDGFYYDFDKEQ---PFSSDELAQIEKKMQE 128
           R S   +M +AV ++W    + V +   I  G+Y +  K+      +   +  ++K+M  
Sbjct: 80  RRSVTLLMQKAVYNLWGREHIGVYVRYAIGQGYYCELMKDGESCKITETMIGALKKEMYR 139

Query: 129 IIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           ++  D P  K  ++ ++A  LF       K E L        V +Y    + D   G  V
Sbjct: 140 LVMADLPIEKYSMNTDEAVALFHELGMKDK-EKLFRYRRSSRVNIYELDHYKDYFYGFMV 198

Query: 189 RSTGQVKKF 197
            STG ++ +
Sbjct: 199 PSTGYLRYY 207


>gi|167836924|ref|ZP_02463807.1| alanyl-tRNA synthetase [Burkholderia thailandensis MSMB43]
          Length = 854

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 33/144 (22%), Positives = 66/144 (45%), Gaps = 20/144 (13%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKM 126
           R+     HS  H+M +A++ +        G +++ D   +DF    P + DE+ ++E  +
Sbjct: 557 RARTARNHSATHLMHKALRDVLGSHVQQKGSLVDADKTRFDFAHNAPLTDDEIRRVEDIV 616

Query: 127 QEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
            E +  ++P + + + ++ A +     LF  +K   +V +L+   ++E            
Sbjct: 617 NEQVLANAPGIVRVMPYDDAVKGGAMALF-GEKYGDEVRVLDLGFSRE------------ 663

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAG 205
           LC G HV  TG +   FK++   G
Sbjct: 664 LCGGTHVHRTGDI-GLFKIVAEGG 686


>gi|120403625|ref|YP_953454.1| alanyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1]
 gi|205830159|sp|A1T8E8|SYA_MYCVP RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|119956443|gb|ABM13448.1| alanyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1]
          Length = 898

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 33/137 (24%), Positives = 59/137 (43%), Gaps = 9/137 (6%)

Query: 61  IITPEDPR--SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY-YDFDKEQPFSSD 117
           ++   DPR    A   HS  H++  A++ +     V  G +   G+  +DF+ +   + D
Sbjct: 566 VVAAVDPRWRHGATQGHSGTHMVHAALRQVLGPNAVQAGSLNRPGYLRFDFNWQGALTDD 625

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           + +QIE+   + +  D      +  H    EL ++K         E+ P +  V      
Sbjct: 626 QRSQIEEVTNQAVEAD------FEVHSFTTELDKAKAMGAMALFGENYPDEVRVVEIGGP 679

Query: 178 EWFDLCRGPHVRSTGQV 194
              +LC G HVRS+ Q+
Sbjct: 680 FSLELCGGTHVRSSAQI 696


>gi|306830937|ref|ZP_07464099.1| alanine--tRNA ligase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|304426960|gb|EFM30070.1| alanine--tRNA ligase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
          Length = 888

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 37/155 (23%), Positives = 71/155 (45%), Gaps = 18/155 (11%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY-YDFDKEQPFSSDELAQIEKKM 126
           R   +  H+  H++  A+ ++  E     G + E+GF  +DF   +  +++EL QIE+++
Sbjct: 576 RHRVIKNHTATHLLHAALHNVIGEHATQAGSLNEEGFLRFDFTHFEAVTAEELRQIEEEV 635

Query: 127 QEIIARDSPF--LKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLC 183
            + I    P   ++  +   K+        E Y           +NV +   G++  +LC
Sbjct: 636 NQQIWNAIPVKTIETDIDTAKSMGAMALFGEKY----------GKNVRVVTIGDYSIELC 685

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLS 218
            G HV +T ++   FK++K  G    G   R +L+
Sbjct: 686 GGTHVSNTAEI-GIFKIVKEEGI---GSGTRRILA 716


>gi|301613124|ref|XP_002936063.1| PREDICTED: bifunctional aminoacyl-tRNA synthetase isoform 1 [Xenopus
            (Silurana) tropicalis]
          Length = 1708

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 2/106 (1%)

Query: 334  FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
             A++P +       +   ++S+R+LP++L ++ +V R E        +R R F   + H 
Sbjct: 1312 IAVRPTSETVMYPAYAKWVQSHRDLPIKLNQWCNVVRWE-FKHPQPFLRTREFLWQEGHT 1370

Query: 394  -FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD 438
             F T E+   E L+I +L   +Y+D     ++    T  EK  G D
Sbjct: 1371 AFATYEEAAEEVLQILDLYARVYEDLLAIPVVKGRKTEKEKFAGGD 1416


>gi|293381923|ref|ZP_06627889.1| seryl-tRNA synthetase [Lactobacillus crispatus 214-1]
 gi|290921510|gb|EFD98546.1| seryl-tRNA synthetase [Lactobacillus crispatus 214-1]
          Length = 435

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 31/151 (20%), Positives = 65/151 (43%), Gaps = 4/151 (2%)

Query: 282 YMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           ++    K+ Y EI  P +++    Q +G +  +  +++ +   DD  K  R   L P   
Sbjct: 181 FLDENTKEGYTEIIPPYLVNDASMQGTGQFPKFHEDVYTIVDNDDPDKP-RDLTLIPTAE 239

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKE 398
              V  F + +    +LP+ +      +R+E   +     GL+R+  F + +    C  +
Sbjct: 240 VPLVNYFRNEIIHENKLPINVTALSPAFRSEAGSAGRDTRGLIRMHEFRKVEMVKVCEPD 299

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
           + ++E  K+ +    + +  G    +V LST
Sbjct: 300 ESWDELEKLTHNAEHLLQKLGLPYHVVALST 330


>gi|302670582|ref|YP_003830542.1| alanyl-tRNA synthetase AlaS [Butyrivibrio proteoclasticus B316]
 gi|302395055|gb|ADL33960.1| alanyl-tRNA synthetase AlaS [Butyrivibrio proteoclasticus B316]
          Length = 884

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 45/198 (22%), Positives = 82/198 (41%), Gaps = 31/198 (15%)

Query: 24  SDVAESISRSLAKKAVAVAIN---------GKVCDLSDPVREGSIEIITPEDPRSLAVIR 74
            D+ E +  + AK  V  A+          GKV   S  V +  + +    + R+     
Sbjct: 512 GDIGEILGSNGAKFEVTEAVKVAGGRTAHVGKVVSGSFKVSD-KVTLSVDAENRAKTCRN 570

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++ +A+Q +  +     G   + D   +DF   Q  ++DE+ ++E  +   I   
Sbjct: 571 HSATHLLQKALQMVLGDGVEQAGSYQDPDKTRFDFSYHQAMTADEIKKVEDIVNSKILEA 630

Query: 134 SPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPH 187
            P + + +S E A++     LF  K               E V +   G++  +LC G H
Sbjct: 631 LPVVTKEMSIEDAKKTGAMALFGEK-------------YGETVRVVNMGDFSIELCGGTH 677

Query: 188 VRSTGQVKKFFKLMKVAG 205
           V +T  +   FK++  +G
Sbjct: 678 VANTSHI-GLFKILSESG 694


>gi|291570537|dbj|BAI92809.1| alanyl-tRNA synthetase [Arthrospira platensis NIES-39]
          Length = 878

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 35/139 (25%), Positives = 61/139 (43%), Gaps = 9/139 (6%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKM 126
           R  A   H+  H++  A++ I  P +  A   +  D   +DF+  +  +++EL Q+E ++
Sbjct: 557 RRRAQANHTATHLLQAALKLIVDPGISQAGSLVAFDRLRFDFNCPRALTTEELQQVENQV 616

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGP 186
              IA   P     ++ E      E+K +       E   A   V  Y  G   +LC G 
Sbjct: 617 NSWIAEAHPATVTQMALE------EAKNKGAIAMFGEKYAAVVRVVDY-PGVSMELCGGT 669

Query: 187 HVRSTGQVKKFFKLMKVAG 205
           HV +T ++   FK++   G
Sbjct: 670 HVTNTAEI-GLFKIVSETG 687


>gi|114561551|ref|YP_749064.1| bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis
           pyrophosphate 3'-pyrophosphohydrolase [Shewanella
           frigidimarina NCIMB 400]
 gi|114332844|gb|ABI70226.1| (p)ppGpp synthetase I, SpoT/RelA [Shewanella frigidimarina NCIMB
           400]
          Length = 702

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 1/68 (1%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIE 60
           P +I +  P+G I   PV+AT  D A  +   +    V   +N +   LS P+  G ++E
Sbjct: 387 PEEIYVFTPEGRILELPVNATAVDFAYEVHTDVGNTCVGARVNRQAYPLSQPLISGQTVE 446

Query: 61  IITPEDPR 68
           IIT +  R
Sbjct: 447 IITAKGAR 454


>gi|315651887|ref|ZP_07904890.1| phosphoribulokinase [Eubacterium saburreum DSM 3986]
 gi|315485889|gb|EFU76268.1| phosphoribulokinase [Eubacterium saburreum DSM 3986]
          Length = 550

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 36/168 (21%), Positives = 76/168 (45%), Gaps = 14/168 (8%)

Query: 36  KKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIW----- 89
           +KA+ V +NGK+ +L   ++   ++E +T  D    ++   S   I+ +A+  I+     
Sbjct: 36  RKALLVKVNGKLQELHKTLKNDVNLEFVTLSDAIGRSIYERSAILILLKAIDDIYGSSIS 95

Query: 90  PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKAREL 149
           P V+ + G    +G +     +  +   ++ +I   M+E++  +    K  +  + A ++
Sbjct: 96  PRVEFSTG----NGLFVRLGSKTDY---DVEKINNHMRELVDENIRIEKTNVHTDLAIKM 148

Query: 150 FESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
           F      ++ E L        V +Y+  ++ D   G  V STG + KF
Sbjct: 149 FHDAG-FFEKEKLFRFRRVSRVNIYKLEDYIDYYYGYMVYSTGYIDKF 195


>gi|292558549|gb|ADE31550.1| Alanyl-tRNA synthetase, class IIc [Streptococcus suis GZ1]
          Length = 397

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 51/197 (25%), Positives = 85/197 (43%), Gaps = 26/197 (13%)

Query: 17  FPVHATGSDVAESISRSLAKKAVAVAINGK---VCDLSDPVREGSIEIITPEDPRSLAVI 73
           F  +ATG  VA  I        V  A NG+     +LS  +  G    +  E  R   V 
Sbjct: 37  FVKNATGDIVATVID-------VQKAPNGQPLHTVELSASISVGQTYTLEIETKRRKGVE 89

Query: 74  R-HSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY-YDFDKEQPFSSDELAQIEKKMQEIIA 131
           + H+  H++  A+ +I  E     G + E  F  +DF   +  +++EL +IE+++ E I 
Sbjct: 90  KNHTATHLLHAALHNIIGEHATQAGSLNEQDFLRFDFTHFEAVTAEELRRIEEEVNEQIW 149

Query: 132 RDSPFLKQYLSHEKARELFESK--KEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHV 188
              P +      + A+E+       E Y  E          V +   G++  +LC G HV
Sbjct: 150 NAIPVVTVETDIDTAKEMGAMALFGEKYGKE----------VRVVTIGDYSVELCGGTHV 199

Query: 189 RSTGQVKKFFKLMKVAG 205
            +T ++   FK++K  G
Sbjct: 200 GNTAEI-GIFKILKEEG 215


>gi|284050469|ref|ZP_06380679.1| alanyl-tRNA synthetase [Arthrospira platensis str. Paraca]
          Length = 876

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 35/139 (25%), Positives = 61/139 (43%), Gaps = 9/139 (6%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKM 126
           R  A   H+  H++  A++ I  P +  A   +  D   +DF+  +  +++EL Q+E ++
Sbjct: 555 RRRAQANHTATHLLQAALKLIVDPGISQAGSLVAFDRLRFDFNCPRALTTEELQQVENQV 614

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGP 186
              IA   P     ++ E      E+K +       E   A   V  Y  G   +LC G 
Sbjct: 615 NSWIAEAHPATVTQMALE------EAKNKGAIAMFGEKYAAVVRVVDY-PGVSMELCGGT 667

Query: 187 HVRSTGQVKKFFKLMKVAG 205
           HV +T ++   FK++   G
Sbjct: 668 HVTNTAEI-GLFKIVSETG 685


>gi|295693517|ref|YP_003602127.1| seryl-tRNA synthetase [Lactobacillus crispatus ST1]
 gi|295031623|emb|CBL51102.1| Seryl-tRNA synthetase [Lactobacillus crispatus ST1]
          Length = 435

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 31/151 (20%), Positives = 65/151 (43%), Gaps = 4/151 (2%)

Query: 282 YMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           ++    K+ Y EI  P +++    Q +G +  +  +++ +   DD  K  R   L P   
Sbjct: 181 FLDENTKEGYTEIIPPYLVNDASMQGTGQFPKFHEDVYTIVDNDDPDKP-RDLTLIPTAE 239

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKE 398
              V  F + +    +LP+ +      +R+E   +     GL+R+  F + +    C  +
Sbjct: 240 VPLVNYFRNEIIHENKLPINVTALSPAFRSEAGSAGRDTRGLIRMHEFRKVEMVKVCKPD 299

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
           + ++E  K+ +    + +  G    +V LST
Sbjct: 300 ESWDELEKLTHNAEHLLQKLGLPYHVVALST 330


>gi|190571072|ref|YP_001975430.1| alanyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|213019592|ref|ZP_03335398.1| alanyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|190357344|emb|CAQ54775.1| alanyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|212995014|gb|EEB55656.1| alanyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
          Length = 860

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 34/149 (22%), Positives = 65/149 (43%), Gaps = 10/149 (6%)

Query: 51  SDPVREGSIEIITPEDPRSLAVIR-HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDF 108
           S  VR+G     +    R   + R HS  H++  A++ I  +     G ++  +   +DF
Sbjct: 534 SGSVRKGDTVTASINKKRRQDLRRNHSATHLLHFALRKILGDHVTQKGSLVAPNRLRFDF 593

Query: 109 DKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK 168
              +P + D+L+ +E  +  +I  +        +  K + + E+  E       E     
Sbjct: 594 SHNKPVTQDQLSSVEDIVNSLIRENLS------TSTKVQGMDEAIDEGAMALFGEKYG-- 645

Query: 169 ENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
           +NV + + G+  +LC G HV  TG++  F
Sbjct: 646 DNVRVVKIGDSKELCGGTHVERTGEIGLF 674


>gi|256844211|ref|ZP_05549698.1| seryl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|262047844|ref|ZP_06020793.1| seryl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
 gi|312976669|ref|ZP_07788418.1| serine--tRNA ligase [Lactobacillus crispatus CTV-05]
 gi|256614116|gb|EEU19318.1| seryl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|260571837|gb|EEX28409.1| seryl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
 gi|310895997|gb|EFQ45062.1| serine--tRNA ligase [Lactobacillus crispatus CTV-05]
          Length = 435

 Score = 40.0 bits (92), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 31/151 (20%), Positives = 65/151 (43%), Gaps = 4/151 (2%)

Query: 282 YMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           ++    K+ Y EI  P +++    Q +G +  +  +++ +   DD  K  R   L P   
Sbjct: 181 FLDENTKEGYTEIIPPYLVNDASMQGTGQFPKFHEDVYTIVDNDDPDKP-RDLTLIPTAE 239

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKE 398
              V  F + +    +LP+ +      +R+E   +     GL+R+  F + +    C  +
Sbjct: 240 VPLVNYFRNEIIHENKLPINVTALSPAFRSEAGSAGRDTRGLIRMHEFRKVEMVKVCKPD 299

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
           + ++E  K+ +    + +  G    +V LST
Sbjct: 300 ESWDELEKLTHNAEHLLQKLGLPYHVVALST 330


>gi|10803041|gb|AAG23689.1|AF297520_1 alanyl-tRNA synthase [Haemophilus ducreyi]
          Length = 783

 Score = 40.0 bits (92), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 64/149 (42%), Gaps = 37/149 (24%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFSSDELAQIEKKM 126
           R      HS  H++  A++ +  E  V  G ++ E+   +DF + Q  S  +L +IE+  
Sbjct: 465 RQAITANHSATHLLHSALRQVLGEHVVQKGSLVSENVLRFDFSQSQAVSKAQLEEIER-- 522

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF------ 180
             I+ R    ++Q L              A  +E ++   AKE  T+   GE +      
Sbjct: 523 --IVNRQ---IRQNL--------------AVTIETMDIETAKEKGTVALFGEKYGDVVRV 563

Query: 181 --------DLCRGPHVRSTGQVKKFFKLM 201
                   +LC G HV+ TG++   FKL+
Sbjct: 564 VGMTDFSIELCGGTHVKHTGEI-GLFKLI 591


>gi|296122797|ref|YP_003630575.1| alanyl-tRNA synthetase [Planctomyces limnophilus DSM 3776]
 gi|296015137|gb|ADG68376.1| alanyl-tRNA synthetase [Planctomyces limnophilus DSM 3776]
          Length = 870

 Score = 40.0 bits (92), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 31/121 (25%), Positives = 57/121 (47%), Gaps = 10/121 (8%)

Query: 76  SCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDS 134
           S  HI+  A+++   E     G  +E D   +DF   +  +++EL  IE ++ ++IA  +
Sbjct: 557 SATHILHHALRTTLGENATQRGSKVEGDQLRFDFAHPRSLTNEELISIEDQINQLIAEGA 616

Query: 135 PFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF-DLCRGPHVRSTGQ 193
           P       + +   + E+KK        E  P  + V +   G++  + C G H+ +TGQ
Sbjct: 617 PI------NTRVMPINEAKKLGAMALFGEKYP--DFVRVVEMGDFSREFCGGTHLSNTGQ 668

Query: 194 V 194
           V
Sbjct: 669 V 669


>gi|227878024|ref|ZP_03996017.1| seryl-tRNA synthetase [Lactobacillus crispatus JV-V01]
 gi|256850727|ref|ZP_05556150.1| seryl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
 gi|227862378|gb|EEJ69904.1| seryl-tRNA synthetase [Lactobacillus crispatus JV-V01]
 gi|256712440|gb|EEU27438.1| seryl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
          Length = 435

 Score = 40.0 bits (92), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 31/151 (20%), Positives = 65/151 (43%), Gaps = 4/151 (2%)

Query: 282 YMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           ++    K+ Y EI  P +++    Q +G +  +  +++ +   DD  K  R   L P   
Sbjct: 181 FLDENTKEGYTEIIPPYLVNDASMQGTGQFPKFHEDVYTIVDNDDPDKP-RDLTLIPTAE 239

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKE 398
              V  F + +    +LP+ +      +R+E   +     GL+R+  F + +    C  +
Sbjct: 240 VPLVNYFRNEIIHENKLPINVTALSPAFRSEAGSAGRDTRGLIRMHEFRKVEMVKVCKPD 299

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
           + ++E  K+ +    + +  G    +V LST
Sbjct: 300 ESWDELEKLTHNAEHLLQKLGLPYHVVALST 330


>gi|149277763|ref|ZP_01883903.1| alanine--tRNA ligase (alanyl-tRNA synthetase) [Pedobacter sp.
           BAL39]
 gi|149231451|gb|EDM36830.1| alanine--tRNA ligase (alanyl-tRNA synthetase) [Pedobacter sp.
           BAL39]
          Length = 900

 Score = 40.0 bits (92), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 75/170 (44%), Gaps = 26/170 (15%)

Query: 44  NGKVCDLSDPVRE---GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII 100
           NG +   +D + E   G+   +  ED R L+   H+  H++  A++ +        G ++
Sbjct: 554 NGVIVHYTDTLPEDLDGTFWAVIDEDKRLLSQDNHTATHLLHAALKKVLGTHVNQKGSLV 613

Query: 101 EDGFY-YDFDKEQPFSSDELAQIE----KKMQEII----ARDSPFLKQYLSHEKARELFE 151
              +  +DF      S ++LA IE    +K++E I     RD P+  Q +S        E
Sbjct: 614 NPEYLRFDFSHFAKISEEDLAAIEHLVNQKVRENIPLKEQRDVPY-DQAISSGVTALFGE 672

Query: 152 SKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLM 201
              E  +V   +   +KE            LC G HV++TGQ+  +FK++
Sbjct: 673 KYGELVRVITFDDHYSKE------------LCGGTHVQATGQI-GYFKII 709


>gi|282882868|ref|ZP_06291473.1| alanine--tRNA ligase [Peptoniphilus lacrimalis 315-B]
 gi|281297279|gb|EFA89770.1| alanine--tRNA ligase [Peptoniphilus lacrimalis 315-B]
          Length = 874

 Score = 40.0 bits (92), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 33/139 (23%), Positives = 63/139 (45%), Gaps = 21/139 (15%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++ +A++ I  +     G ++E D   +DF   Q  S +E+ ++E ++ + I   
Sbjct: 566 HSVTHLLHKALKEILGDHVNQAGSLVEADRLRFDFTHYQAMSQEEIKKVEDRVNQKIFEA 625

Query: 134 SPFLKQYLSHEKAREL-----FESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPH 187
                   + + A+EL     FE K               + V +   G++  +LC G H
Sbjct: 626 LSVTTTVTNPKHAQELGAVGLFEEK-------------YGDIVRVLSMGDYSIELCGGTH 672

Query: 188 VRSTGQVKKFFKLMKVAGA 206
           VR+T ++   FK++  +G 
Sbjct: 673 VRNTSEI-SMFKILSESGV 690


>gi|315499502|ref|YP_004088305.1| alanyl-tRNA synthetase [Asticcacaulis excentricus CB 48]
 gi|315417514|gb|ADU14154.1| alanyl-tRNA synthetase [Asticcacaulis excentricus CB 48]
          Length = 880

 Score = 40.0 bits (92), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 33/137 (24%), Positives = 66/137 (48%), Gaps = 11/137 (8%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS AH++  A++++        G +++ +   +DF    P S +E+ +IE ++  +I ++
Sbjct: 564 HSAAHLLHAALKNVLGPHVAQKGQLVDAERMRFDFSHGAPVSPEEIERIEAEVNAVILQN 623

Query: 134 SPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
                + ++  +A E     LF  +K   +V +L    A +      +G   +LC G HV
Sbjct: 624 EAATTKMMAPAEAIEAGAVALF-GEKYGDEVRVLSLGHALDGAD---KGYSVELCGGTHV 679

Query: 189 RSTGQVKKFFKLMKVAG 205
             TG +   FK++  +G
Sbjct: 680 SRTGDI-ALFKIISESG 695


>gi|240170724|ref|ZP_04749383.1| alanyl-tRNA synthetase [Mycobacterium kansasii ATCC 12478]
          Length = 904

 Score = 40.0 bits (92), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 34/137 (24%), Positives = 56/137 (40%), Gaps = 9/137 (6%)

Query: 61  IITPEDP--RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY-YDFDKEQPFSSD 117
           +I   DP  R  A   HS  H++  A++ +     V  G +   G+  +DF  + P + D
Sbjct: 568 VIAAVDPGWRRGATQGHSGTHMVHAALRQVLGPNAVQAGSLNRPGYLRFDFSWQGPLTED 627

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +   IE+   E +  D      +  H    +L ++K         ES P +  V      
Sbjct: 628 QRTHIEEVTNEAVQAD------FEVHTFTEQLEKAKAMGAMALFGESYPDEVRVVEIGGP 681

Query: 178 EWFDLCRGPHVRSTGQV 194
              +LC G HV S+ Q+
Sbjct: 682 FSLELCGGTHVESSAQI 698


>gi|150004460|ref|YP_001299204.1| alanyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482]
 gi|205829986|sp|A6L1L8|SYA_BACV8 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|149932884|gb|ABR39582.1| alanyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482]
          Length = 871

 Score = 40.0 bits (92), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 60/134 (44%), Gaps = 16/134 (11%)

Query: 66  DPRSLAVIRHSCAHIMAEAV-QSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           + R+     HSC H++ EA+ Q +   V+     +  +   +DF   Q  + ++L ++E 
Sbjct: 553 EKRAACAANHSCTHLLDEALRQVLGTHVEQKGSLVTPESLRFDFSHFQKVTDEQLREVEH 612

Query: 125 KMQEIIARDSPFLKQY--LSHEKARELFESK--KEAYKVEILESIPAKENVTLYRQGEWF 180
            +   I  + P L +Y  L  EKA+EL       E Y  E          V + + G   
Sbjct: 613 LVNAKIRENIP-LTEYRNLPIEKAKELGAIALFGEKYGDE----------VRVVQFGNSI 661

Query: 181 DLCRGPHVRSTGQV 194
           + C G HV +TG++
Sbjct: 662 EFCGGTHVPATGKI 675


>gi|91078076|ref|XP_971952.1| PREDICTED: similar to prolyl-tRNA synthetase [Tribolium castaneum]
          Length = 448

 Score = 40.0 bits (92), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 34/146 (23%), Positives = 67/146 (45%), Gaps = 8/146 (5%)

Query: 253 MDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHW 311
           ++L  I +   G   +   G K  + L   +  ++K    ++I  P + +  LW+++G  
Sbjct: 39  LELGIIRQASPGCFHFLPLGVKSLEKLTRLVDEEMKKIGGQKIIFPTLTNAKLWEKTGRL 98

Query: 312 DSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF-NHGLKSYRELPVRLAEFGSVYR 370
           ++  + +F +K   D     +++ L P +      +  +    SY+ LP++L +  S YR
Sbjct: 99  ETVSSELFQIKDRHD-----QSYILSPTHEEAASNLLASLAPISYKHLPLKLYQITSKYR 153

Query: 371 NEPSGSLHGLMRVRGFTQDDAHVFCT 396
           +E      GLMR + F   D + F T
Sbjct: 154 DEMKPRF-GLMRGKQFLMKDMYSFDT 178


>gi|29833392|ref|NP_828026.1| alanyl-tRNA synthetase [Streptomyces avermitilis MA-4680]
 gi|41018194|sp|Q827S4|SYA_STRAW RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|29610515|dbj|BAC74561.1| putative alanyl-tRNA synthetase [Streptomyces avermitilis MA-4680]
          Length = 890

 Score = 40.0 bits (92), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 40/162 (24%), Positives = 71/162 (43%), Gaps = 15/162 (9%)

Query: 68  RSLAVIR-HSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSDELAQIEKK 125
           R  A+ R HS  H+  +A++          G   + G F +DF       +  +  +E++
Sbjct: 565 RRKAIARAHSATHLTHQALRDALGPTAAQAGSENQPGRFRFDFGSPSAVPTTVMTDVEQQ 624

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF-DLCR 184
           + E++ARD     + +S      + E+KK+    E  E     E V +   G++  +LC 
Sbjct: 625 INEVLARDLDVQAEVMS------IDEAKKQGAIAEFGEKY--GERVRVVTIGDFSKELCG 676

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWN 226
           G HV +T Q      L+K+ G    G   R + + +   A+N
Sbjct: 677 GTHVHNTAQ----LGLVKLLGESSIGSGVRRIEALVGVDAYN 714


>gi|127514427|ref|YP_001095624.1| bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis
           pyrophosphate 3'-pyrophosphohydrolase [Shewanella
           loihica PV-4]
 gi|126639722|gb|ABO25365.1| (p)ppGpp synthetase I, SpoT/RelA [Shewanella loihica PV-4]
          Length = 701

 Score = 40.0 bits (92), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 1/68 (1%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIE 60
           P +I +  P+G I   PV AT  D A  +   +    V   +N +   LS P+  G +IE
Sbjct: 387 PEEIYVFTPEGRILELPVGATAVDFAYEVHTDVGNTCVGARVNRQAYPLSQPLISGQTIE 446

Query: 61  IITPEDPR 68
           IIT +  R
Sbjct: 447 IITAKGAR 454


>gi|294778219|ref|ZP_06743645.1| alanine--tRNA ligase [Bacteroides vulgatus PC510]
 gi|294447847|gb|EFG16421.1| alanine--tRNA ligase [Bacteroides vulgatus PC510]
          Length = 872

 Score = 40.0 bits (92), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 60/134 (44%), Gaps = 16/134 (11%)

Query: 66  DPRSLAVIRHSCAHIMAEAV-QSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           + R+     HSC H++ EA+ Q +   V+     +  +   +DF   Q  + ++L ++E 
Sbjct: 554 EKRAACAANHSCTHLLDEALRQVLGTHVEQKGSLVTPESLRFDFSHFQKVTDEQLREVEH 613

Query: 125 KMQEIIARDSPFLKQY--LSHEKARELFESK--KEAYKVEILESIPAKENVTLYRQGEWF 180
            +   I  + P L +Y  L  EKA+EL       E Y  E          V + + G   
Sbjct: 614 LVNAKIRENIP-LTEYRNLPIEKAKELGAIALFGEKYGDE----------VRVVQFGNSI 662

Query: 181 DLCRGPHVRSTGQV 194
           + C G HV +TG++
Sbjct: 663 EFCGGTHVPATGKI 676


>gi|170583217|ref|XP_001896481.1| hypothetical protein Bm1_25105 [Brugia malayi]
 gi|158596302|gb|EDP34673.1| hypothetical protein Bm1_25105 [Brugia malayi]
          Length = 304

 Score = 40.0 bits (92), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 62/137 (45%), Gaps = 18/137 (13%)

Query: 76  SCAHIMAEAV-QSIWPEVQVAIGPIIED----GFYY-----DFDKEQPFSSDELAQIEKK 125
           SCA ++   V Q+   +VQ+ +GP   D     F Y     D     P S +  A  EK 
Sbjct: 119 SCAFLLGAVVDQAFAVDVQL-VGPSKVDYHSGRFEYIAKIKDLHDWAPNSENLFALTEKV 177

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIP-----AKENVTLYRQGEWF 180
           + E I +       ++S E A +LF+S     K E+L  I       ++ V +YR G++ 
Sbjct: 178 VGEYITKALVIEPLFVSLEFALDLFDSNIS--KQELLHEIKQETDNGEQGVIIYRMGDFV 235

Query: 181 DLCRGPHVRSTGQVKKF 197
           D+  GP +  T  + KF
Sbjct: 236 DITYGPLIPCTSHIDKF 252


>gi|28377392|ref|NP_784284.1| seryl-tRNA synthetase [Lactobacillus plantarum WCFS1]
 gi|38258545|sp|Q88Z60|SYS1_LACPL RecName: Full=Seryl-tRNA synthetase 1; AltName: Full=Serine--tRNA
           ligase 1; Short=SerRS 1; AltName:
           Full=Seryl-tRNA(Ser/Sec) synthetase 1
 gi|28270224|emb|CAD63125.1| serine--tRNA ligase [Lactobacillus plantarum WCFS1]
          Length = 423

 Score = 40.0 bits (92), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 32/173 (18%), Positives = 73/173 (42%), Gaps = 13/173 (7%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMR--RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMF 319
           G+  +++   G  + + + S+M      K  Y EI  P +++      +G +  ++ +++
Sbjct: 160 GARFVYYKDAGALLERAVYSFMLDLHTQKQGYHEIIPPYLVNAQTMYGTGQFPKFKEDVY 219

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS--- 376
            V+ +  T+       L           + + + S  +LP         YR+E   +   
Sbjct: 220 TVESSGMTLIPTAEVPL--------TNYYANEILSEDQLPTYFTAMTPCYRSEAGSAGRD 271

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
             GL+R+  F + +   +C  E  ++E  K+ +    + ++ G    ++KLST
Sbjct: 272 TRGLIRMHQFHKVEMVKYCKPENSYDELEKLTDNAEEVLRELGLAYHVIKLST 324


>gi|22299646|ref|NP_682893.1| alanyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
 gi|22295830|dbj|BAC09655.1| alanyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
          Length = 891

 Score = 40.0 bits (92), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 65/137 (47%), Gaps = 19/137 (13%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           H+  H++  A++ +  E     G ++  D   +DF+  +P + +EL QIE ++   I+ +
Sbjct: 576 HTATHLLQAALKKLIDENISQAGSLVAFDRLRFDFNCPRPLTREELQQIEDQINAWIS-E 634

Query: 134 SPFLKQY---LSHEKARELFESKKEAY--KVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           S     Y   LS  KA+       E Y  +V +L+ IP          G   +LC G HV
Sbjct: 635 SHTTHTYIMALSEAKAKGAIAMFGEKYGEQVRVLD-IP----------GVSMELCGGTHV 683

Query: 189 RSTGQVKKFFKLMKVAG 205
            +T ++   FK++  +G
Sbjct: 684 HNTAEI-GLFKIISESG 699


>gi|306820564|ref|ZP_07454195.1| phosphoribulokinase/uridine kinase [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
 gi|304551381|gb|EFM39341.1| phosphoribulokinase/uridine kinase [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
          Length = 550

 Score = 40.0 bits (92), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 81/179 (45%), Gaps = 6/179 (3%)

Query: 41  VAINGKVCDLSDPVREG---SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIG 97
           V IN ++ +L+  + +    S   +T ++ R  A +R + + I   A++   P  +  I 
Sbjct: 36  VLINNEIRELTRKLNDNDEISFLDLTVKEARD-AYMR-TLSFIFISALKKTNPSAKCTIE 93

Query: 98  PIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAY 157
             + +G Y   D  +  +   +++I +KM+EI+  D    K   +  +A++++  +    
Sbjct: 94  HSLSNGIYCYIDNGRQVNRAVVSKIYEKMKEIVKEDIKIKKLEFTKSEAKKIYIEENFDV 153

Query: 158 KVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRG-DSNRP 215
           K+ +L+    K+ VTLY      D   G  + STG  K F   +   G    G D  RP
Sbjct: 154 KLGLLDYKDDKKKVTLYELCGQKDYFYGYMLPSTGYAKIFNLRLCNGGIVLLGPDIKRP 212


>gi|298675600|ref|YP_003727350.1| glycyl-tRNA synthetase [Methanohalobium evestigatum Z-7303]
 gi|298288588|gb|ADI74554.1| glycyl-tRNA synthetase [Methanohalobium evestigatum Z-7303]
          Length = 582

 Score = 40.0 bits (92), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 3/86 (3%)

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRE-LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
           R   L+P    G    F    + YRE LP  + + G  YRNE S    G++R+R FTQ +
Sbjct: 156 RPAYLRPETAQGMFINFLRLARYYREKLPFGVTQIGKSYRNEIS-PRQGVIRLREFTQAE 214

Query: 391 AHVFCTKE-QMFNECLKIHNLIISIY 415
           A +F   E +   E  K  + ++++Y
Sbjct: 215 AEIFIPPEDKTHPEFDKYADTVLNMY 240


>gi|261364444|ref|ZP_05977327.1| alanine--tRNA ligase [Neisseria mucosa ATCC 25996]
 gi|288567357|gb|EFC88917.1| alanine--tRNA ligase [Neisseria mucosa ATCC 25996]
          Length = 873

 Score = 40.0 bits (92), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 75/173 (43%), Gaps = 24/173 (13%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQP--FSSDELAQIE 123
           D R+  +  HS  H+M +A++ +     V     +++     FD   P   S++E+A++E
Sbjct: 553 DIRNSIMRNHSVTHLMHKALRDVLG-THVEQKGSLQNAELTRFDISHPQGISAEEIAEVE 611

Query: 124 KKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGE 178
           +++   I  + P   + +S E A++     LF  K   +             V +   G+
Sbjct: 612 RRVNAAIIANVPVKVETMSIEDAQKSGAVMLFGEKYGDF-------------VRVITMGD 658

Query: 179 W-FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQE 230
           +  +LC G HV  TG +  FFK++   G    G      ++ +   AW   QE
Sbjct: 659 YSIELCGGTHVARTGDI-GFFKIIS-EGGIAAGIRRVEAITGLAALAWAQNQE 709


>gi|134093868|ref|YP_001098943.1| alanyl-tRNA synthetase [Herminiimonas arsenicoxydans]
 gi|205830068|sp|A4G2S9|SYA_HERAR RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|133737771|emb|CAL60816.1| alanyl-tRNA synthetase [Herminiimonas arsenicoxydans]
          Length = 869

 Score = 40.0 bits (92), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 66/144 (45%), Gaps = 13/144 (9%)

Query: 65  EDPRSLAVIR-HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQI 122
           +  R  A +R HS  HIM +A++ +  E     G +++ +   +DF    P + +++ +I
Sbjct: 548 DGARRAATMRNHSVTHIMHKALREVLGEHVQQKGSLVDAEKTRFDFAHNAPVTHEQILEI 607

Query: 123 EKKMQ-EIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           EK++  EI+A          S  +AR +     +     +L      E V +   G   +
Sbjct: 608 EKRVNAEILAN---------SDTQARVMDIESAQKTGAMMLFGEKYGETVRVLDIGSSRE 658

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAG 205
           LC G HV  TG +   FK++  +G
Sbjct: 659 LCGGTHVSRTGDI-GLFKVVGESG 681


>gi|326565354|gb|EGE15532.1| alanyl-tRNA synthetase [Moraxella catarrhalis 12P80B1]
          Length = 893

 Score = 40.0 bits (92), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 34/145 (23%), Positives = 66/145 (45%), Gaps = 14/145 (9%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKM 126
           R+ +   HS  H++  A+++I  +     G ++  D   +DF  ++P +   ++QIE  +
Sbjct: 563 RASSAKNHSATHLLHAALRTILGDGVSQKGSMVSSDLLRFDFSYDKPLTEQNISQIEIMV 622

Query: 127 QEIIARDSPFLKQYLSHEKARE----LFESKKEAYKVEILESIPAKENVTLYRQGEWF-- 180
            + I  ++P   + L  + A+     +   +K    V +L         T  + G+ F  
Sbjct: 623 NQQILANTPAHVEILDIDSAKNKGAMMLFGEKYGDTVRVLSM------GTTDKDGKPFSI 676

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAG 205
           +LC G HV  TG +   FK++   G
Sbjct: 677 ELCGGLHVTRTGDI-GLFKIISEQG 700


>gi|291618585|ref|YP_003521327.1| AlaS [Pantoea ananatis LMG 20103]
 gi|291153615|gb|ADD78199.1| AlaS [Pantoea ananatis LMG 20103]
          Length = 875

 Score = 40.0 bits (92), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 10/141 (7%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY-YDFDKEQPFSSD 117
           +E +  E  R+   + HS  H++  A++ +  E     G ++ D +  +DF   +     
Sbjct: 548 LEAVVDEARRARIRLNHSATHLLHAALRQVLGEHVAQKGSLVNDKYLRFDFSHFEAMKPQ 607

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           E+ Q+E  +   I R+ P   + +  E A+        A     L      + V +   G
Sbjct: 608 EIRQVEDIVNAQIRRNLPVETRVMDLEAAK--------AKGAMALFGEKYDQQVRVLTMG 659

Query: 178 EW-FDLCRGPHVRSTGQVKKF 197
           ++  +LC G H   TG +  F
Sbjct: 660 DFSVELCGGTHAARTGDIGLF 680


>gi|124485976|ref|YP_001030592.1| glycyl-tRNA synthetase [Methanocorpusculum labreanum Z]
 gi|124363517|gb|ABN07325.1| glycyl-tRNA synthetase [Methanocorpusculum labreanum Z]
          Length = 576

 Score = 40.0 bits (92), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 2/69 (2%)

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRE-LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
           R   L+P    G    F   L+ YR+ LP    + G  YRNE S    G++R+R FTQ +
Sbjct: 159 RKGYLRPETAQGMFVDFPRLLRFYRDHLPFGAVQVGKSYRNEIS-PRQGMIRLREFTQAE 217

Query: 391 AHVFCTKEQ 399
           A +F   E+
Sbjct: 218 AEIFVHPEE 226


>gi|323699014|ref|ZP_08110926.1| alanyl-tRNA synthetase [Desulfovibrio sp. ND132]
 gi|323458946|gb|EGB14811.1| alanyl-tRNA synthetase [Desulfovibrio desulfuricans ND132]
          Length = 879

 Score = 40.0 bits (92), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 35/151 (23%), Positives = 68/151 (45%), Gaps = 19/151 (12%)

Query: 54  VREGSIEIITPEDPRSLAVIR-HSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKE 111
           ++ G    +  +  + LA +R H+  H++  A+Q +  +     G ++  D   +DF   
Sbjct: 547 LKPGDAAFLNVDRSQRLATMRNHTSTHLLHAALQKVLGDHAKQAGSLVGPDRLRFDFTHI 606

Query: 112 QPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKAR-----ELFESKKEAYKVEILESIP 166
           +  S +E+A++EK + + I    P  ++ +S E A+      LF  +K    V ++E +P
Sbjct: 607 KGLSPEEIAEVEKLVNQAIFEAIPVTREVMSIEAAQAKGATALF-GEKYGDTVSVIE-VP 664

Query: 167 AKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
                     G   + C G H+ +TG    F
Sbjct: 665 ----------GVSMEFCGGTHLDNTGIAGSF 685


>gi|308389728|gb|ADO32048.1| alanyl-tRNA synthetase [Neisseria meningitidis alpha710]
          Length = 885

 Score = 40.0 bits (92), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 37/178 (20%), Positives = 77/178 (43%), Gaps = 18/178 (10%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSS 116
           S+     ++ R+  +  HS  H+M +A++ +  E V+     +  +   +D    Q  ++
Sbjct: 556 SVTAKVDDEIRNANMRNHSATHLMHKALRDVLGEHVEQKGSLVTAESTRFDISHPQAVTA 615

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARE----LFESKKEAYKVEILESIPAKENVT 172
           +E+A++E+++ E I  +       +S E A++    +   +K   +V +L+         
Sbjct: 616 EEIAEVERRVNEAILANVAVNAAIMSMEDAQKTGAMMLFGEKYGDEVRVLQ--------- 666

Query: 173 LYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQE 230
               G   +LC G HV  TG +   FK++   G    G      ++ +    W  +QE
Sbjct: 667 --MGGFSTELCGGTHVSRTGDI-GLFKIIS-EGGIAAGVRRIEAITGLNALKWAQEQE 720


>gi|270002317|gb|EEZ98764.1| hypothetical protein TcasGA2_TC001328 [Tribolium castaneum]
          Length = 351

 Score = 40.0 bits (92), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 34/146 (23%), Positives = 67/146 (45%), Gaps = 8/146 (5%)

Query: 253 MDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHW 311
           ++L  I +   G   +   G K  + L   +  ++K    ++I  P + +  LW+++G  
Sbjct: 39  LELGIIRQASPGCFHFLPLGVKSLEKLTRLVDEEMKKIGGQKIIFPTLTNAKLWEKTGRL 98

Query: 312 DSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF-NHGLKSYRELPVRLAEFGSVYR 370
           ++  + +F +K   D     +++ L P +      +  +    SY+ LP++L +  S YR
Sbjct: 99  ETVSSELFQIKDRHD-----QSYILSPTHEEAASNLLASLAPISYKHLPLKLYQITSKYR 153

Query: 371 NEPSGSLHGLMRVRGFTQDDAHVFCT 396
           +E      GLMR + F   D + F T
Sbjct: 154 DEMKPRF-GLMRGKQFLMKDMYSFDT 178


>gi|269795075|ref|YP_003314530.1| alanyl-tRNA synthetase [Sanguibacter keddieii DSM 10542]
 gi|269097260|gb|ACZ21696.1| alanyl-tRNA synthetase [Sanguibacter keddieii DSM 10542]
          Length = 895

 Score = 40.0 bits (92), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 72/157 (45%), Gaps = 20/157 (12%)

Query: 45  GKVCDLSDPVREGSIEIITPEDPRSLAVIR-HSCAHIMAEAVQ-SIWPEVQVAIGPIIED 102
           G+V D    V  G     T +  R  A+ R HS  H++ +A+Q S+  +   A       
Sbjct: 548 GRVVD--GVVTMGESGTATIDTARRKAISRAHSATHMIHKALQESLGKDATQAGSENAPS 605

Query: 103 GFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFE----SKKEAYK 158
              +DF   Q   +  LA+IE+++   +A D    +Q ++ ++AR L       +K   +
Sbjct: 606 RIRFDFRSSQAVPTGALAEIEERVNTQLAEDLEVTEQVMNIDEARALGAMALFGEKYGDR 665

Query: 159 VEILESIPAKENVTLYRQGEWF-DLCRGPHVRSTGQV 194
           V ++ SI           G+W  +LC G HV+ +GQ+
Sbjct: 666 VRVV-SI----------GGDWSRELCAGTHVKRSGQL 691


>gi|325130665|gb|EGC53406.1| alanyl-tRNA synthetase [Neisseria meningitidis OX99.30304]
          Length = 874

 Score = 40.0 bits (92), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 37/178 (20%), Positives = 77/178 (43%), Gaps = 18/178 (10%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSS 116
           S+     ++ R+  +  HS  H+M +A++ +  E V+     +  +   +D    Q  ++
Sbjct: 545 SVTAKVDDEIRNANMRNHSATHLMHKALRDVLGEHVEQKGSLVTAESTRFDISHPQAVTA 604

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARE----LFESKKEAYKVEILESIPAKENVT 172
           +E+A++E+++ E I  +       +S E A++    +   +K   +V +L+         
Sbjct: 605 EEIAEVERRVNEAILANVAVNAAIMSMEDAQKTGAMMLFGEKYGDEVRVLQ--------- 655

Query: 173 LYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQE 230
               G   +LC G HV  TG +   FK++   G    G      ++ +    W  +QE
Sbjct: 656 --MGGFSTELCGGTHVSRTGDI-GLFKIIS-EGGIAAGVRRIEAITGLNALKWAQEQE 709


>gi|256391573|ref|YP_003113137.1| alanyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
 gi|256357799|gb|ACU71296.1| alanyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
          Length = 889

 Score = 40.0 bits (92), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 56/130 (43%), Gaps = 11/130 (8%)

Query: 68  RSLAVIR-HSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSDELAQIEKK 125
           R  A+ R H+  H++ +A + +  E     G     G F +DF          LA +E++
Sbjct: 564 RRAAISRAHTATHMVHKAFRELLGETATQAGSENSPGRFRFDFASPGAVPHSVLADVEQR 623

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCR 184
           + E++  D     Q +S  +A+        A     L      + V +   GEW  +LC 
Sbjct: 624 VNELLIDDLSVTAQVMSQPEAK--------AMGAMALFGEKYGDRVRVVSVGEWAHELCG 675

Query: 185 GPHVRSTGQV 194
           G HV +TG++
Sbjct: 676 GTHVDNTGRL 685


>gi|237755762|ref|ZP_04584366.1| alanyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense SS-5]
 gi|237692072|gb|EEP61076.1| alanyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense SS-5]
          Length = 876

 Score = 40.0 bits (92), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 40/164 (24%), Positives = 79/164 (48%), Gaps = 23/164 (14%)

Query: 45  GKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCA-HIMAEAVQSIWPEVQVAIGPIIEDG 103
           GKV  L   V+EG+      +  R   ++RH  A H++  A++++  +     G ++ D 
Sbjct: 539 GKV--LFGSVKEGAYVRAKVDKERRENIMRHHTATHLLHAALRNVLGDHVKQAGSLVSDE 596

Query: 104 FY-YDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAY 157
           +  +DF   +  + +EL  +E+ +   I ++   + Q + +E+A +     +FE K  A 
Sbjct: 597 YLRFDFTHFESMTDEELKAVEELVNREIMKNEEVVCQEMQYEEALKSGAMAIFEEKY-AD 655

Query: 158 KVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLM 201
            V ++ +  +KE            LC G HV+ TG +  +FK++
Sbjct: 656 VVRVISAGISKE------------LCGGTHVKRTGDI-GYFKIL 686


>gi|227503518|ref|ZP_03933567.1| GTP pyrophosphokinase [Corynebacterium accolens ATCC 49725]
 gi|227076021|gb|EEI13984.1| GTP pyrophosphokinase [Corynebacterium accolens ATCC 49725]
          Length = 764

 Score = 40.0 bits (92), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 1/61 (1%)

Query: 10  PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPEDPR 68
           P G + + P  +T  D A ++   +  + +   +NGK+  L  P++ G  +EI T +DP 
Sbjct: 426 PKGDVVDLPAGSTPVDFAYAVHTEVGHRCIGAKVNGKLVALESPLKSGDKVEIFTSKDPN 485

Query: 69  S 69
           +
Sbjct: 486 A 486


>gi|73668887|ref|YP_304902.1| alanyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro]
 gi|121697109|sp|Q46CS0|SYA_METBF RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|72396049|gb|AAZ70322.1| alanyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro]
          Length = 923

 Score = 40.0 bits (92), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 34/144 (23%), Positives = 64/144 (44%), Gaps = 10/144 (6%)

Query: 54  VREGSIEIITPEDPRSLAVIRHSCA-HIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKE 111
           +R+G I     ++ R + + RH  A HI+ +A + +    +  A     ED    D    
Sbjct: 589 IRKGDIVNGKVDEKRRMTLARHHTATHIVNDAARKVLGTHIWQAGAQKFEDHSRLDLSHY 648

Query: 112 QPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES-IPAKEN 170
           +  S DEL QIE     ++  +   + +++S  +A       ++ Y   + +  +P  E 
Sbjct: 649 KHISPDELKQIELLANRMVMENKRVVTEWMSRTEA-------EQEYGFGLYQGGVPPGEK 701

Query: 171 VTLYRQGEWFDLCRGPHVRSTGQV 194
           + + + G+  + C G H  STG V
Sbjct: 702 IRVVKVGDDVEACAGTHCVSTGVV 725


>gi|29349403|ref|NP_812906.1| alanyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
 gi|41018213|sp|Q8A0M6|SYA_BACTN RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|29341312|gb|AAO79100.1| alanyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
          Length = 872

 Score = 40.0 bits (92), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 58/132 (43%), Gaps = 12/132 (9%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEK 124
           D R+     HS  H++  A++ +  E     G ++  D   +DF   Q  + +E+ Q+E 
Sbjct: 554 DKRAACAANHSATHLLDSALREVLGEHIEQKGSLVTPDSLRFDFSHFQKVTDEEIRQVEH 613

Query: 125 KMQEIIARDSPFLKQY--LSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
            +   I  + P LK+Y  +  E+A+EL        K          E V + + G   + 
Sbjct: 614 LVNAKIRANIP-LKEYRNIPIEEAKELGAIALFGEKY--------GERVRVIQFGSSIEF 664

Query: 183 CRGPHVRSTGQV 194
           C G HV +TG +
Sbjct: 665 CGGIHVAATGNI 676


>gi|306836233|ref|ZP_07469216.1| GTP diphosphokinase [Corynebacterium accolens ATCC 49726]
 gi|304567887|gb|EFM43469.1| GTP diphosphokinase [Corynebacterium accolens ATCC 49726]
          Length = 764

 Score = 40.0 bits (92), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 1/61 (1%)

Query: 10  PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPEDPR 68
           P G + + P  +T  D A ++   +  + +   +NGK+  L  P++ G  +EI T +DP 
Sbjct: 426 PKGDVVDLPAGSTPVDFAYAVHTEVGHRCIGAKVNGKLVALESPLKSGDKVEIFTSKDPN 485

Query: 69  S 69
           +
Sbjct: 486 A 486


>gi|307152653|ref|YP_003888037.1| alanyl-tRNA synthetase [Cyanothece sp. PCC 7822]
 gi|306982881|gb|ADN14762.1| alanyl-tRNA synthetase [Cyanothece sp. PCC 7822]
          Length = 881

 Score = 40.0 bits (92), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 59/135 (43%), Gaps = 15/135 (11%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIAR- 132
           H+  H++  A++ I  E     G ++  D   +DF+  +  +  EL QIE  +   IA  
Sbjct: 566 HTATHLLQAALKKIVDESVSQAGSLVTFDRLRFDFNCPRAVTPQELQQIEDLINSWIAEA 625

Query: 133 -DSPFLKQYLSHEKARELFESKKEAYKVEI-LESIPAKENVTLYRQGEWFDLCRGPHVRS 190
            D+      L   KA+       E Y  E+ +  +P          G   +LC G HV++
Sbjct: 626 HDAHTYIMALEEAKAKGAVAMFGEKYGAEVRVLDVP----------GVSMELCGGTHVKN 675

Query: 191 TGQVKKFFKLMKVAG 205
           T ++   FK+M  +G
Sbjct: 676 TAEI-GLFKIMSESG 689


>gi|266623547|ref|ZP_06116482.1| GTP diphosphokinase [Clostridium hathewayi DSM 13479]
 gi|288864647|gb|EFC96945.1| GTP diphosphokinase [Clostridium hathewayi DSM 13479]
          Length = 779

 Score = 40.0 bits (92), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 1/58 (1%)

Query: 10  PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPED 66
           P G +KN P  +T  D A SI  ++  K V   +NGK+ ++   ++ G  +E+IT ++
Sbjct: 441 PSGDVKNLPSGSTPIDFAYSIHSAVGNKMVGARVNGKLVNIDYVIQNGDQVEVITSQN 498


>gi|284799808|ref|ZP_06390350.1| alanine--tRNA ligase [Neisseria subflava NJ9703]
 gi|284796867|gb|EFC52214.1| alanine--tRNA ligase [Neisseria subflava NJ9703]
          Length = 624

 Score = 40.0 bits (92), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 40/179 (22%), Positives = 76/179 (42%), Gaps = 20/179 (11%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSS 116
           S+     ++ R+  +  HS  H+M +A++ +  E V+     +  +   +D    Q  ++
Sbjct: 295 SVTAKVDDEIRNANMRNHSATHLMHKALRDVLGEHVEQKGSLVTAESTRFDISHPQAVTA 354

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENV 171
           +E+A++E+++ E I  +       +S E A++     LF  K   Y  E+          
Sbjct: 355 EEIAEVERRVNEAILANVAVNAAIMSMEDAQKTGAMMLFGEK---YGDEVR--------- 402

Query: 172 TLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQE 230
            L   G   +LC G HV  TG +   FK++   G    G      ++ +    W  +QE
Sbjct: 403 VLQMGGFSTELCGGTHVSRTGDI-GLFKIIS-EGGIAAGVRRIEAITGLNALKWAQEQE 459


>gi|77918891|ref|YP_356706.1| (p)ppGpp synthetase II/guanosine-3',5'-bis pyrophosphate
           3'-pyrophosphohydrolase [Pelobacter carbinolicus DSM
           2380]
 gi|77544974|gb|ABA88536.1| (p)ppGpp synthetase II/guanosine-3',5'-bis pyrophosphate
           3'-pyrophosphohydrolase [Pelobacter carbinolicus DSM
           2380]
          Length = 718

 Score = 40.0 bits (92), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 1/55 (1%)

Query: 10  PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           P G +K FP  AT  D A S+   +  + V   +NGK+  L  P+  G  +E++T
Sbjct: 395 PKGEVKAFPRGATPIDFAYSVHTEVGNRCVGARVNGKLVPLKTPLSNGDVVEVVT 449


>gi|34222740|sp|Q8DH56|SYA_THEEB RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
          Length = 882

 Score = 40.0 bits (92), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 65/137 (47%), Gaps = 19/137 (13%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           H+  H++  A++ +  E     G ++  D   +DF+  +P + +EL QIE ++   I+ +
Sbjct: 567 HTATHLLQAALKKLIDENISQAGSLVAFDRLRFDFNCPRPLTREELQQIEDQINAWIS-E 625

Query: 134 SPFLKQY---LSHEKARELFESKKEAY--KVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           S     Y   LS  KA+       E Y  +V +L+ IP          G   +LC G HV
Sbjct: 626 SHTTHTYIMALSEAKAKGAIAMFGEKYGEQVRVLD-IP----------GVSMELCGGTHV 674

Query: 189 RSTGQVKKFFKLMKVAG 205
            +T ++   FK++  +G
Sbjct: 675 HNTAEI-GLFKIISESG 690


>gi|326566717|gb|EGE16856.1| alanyl-tRNA synthetase [Moraxella catarrhalis 103P14B1]
          Length = 887

 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 34/145 (23%), Positives = 66/145 (45%), Gaps = 14/145 (9%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKM 126
           R+ +   HS  H++  A+++I  +     G ++  D   +DF  ++P +   ++QIE  +
Sbjct: 557 RASSAKNHSATHLLHAALRTILGDGVSQKGSMVSSDLLRFDFSYDKPLTEQNISQIEIMV 616

Query: 127 QEIIARDSPFLKQYLSHEKARE----LFESKKEAYKVEILESIPAKENVTLYRQGEWF-- 180
            + I  ++P   + L  + A+     +   +K    V +L         T  + G+ F  
Sbjct: 617 NQQILANTPAHVEILDIDSAKNKGAMMLFGEKYGDTVRVLSM------GTTDKDGKPFSI 670

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAG 205
           +LC G HV  TG +   FK++   G
Sbjct: 671 ELCGGLHVTRTGDI-GLFKIISEQG 694


>gi|304310760|ref|YP_003810358.1| Alanyl-tRNA synthetase [gamma proteobacterium HdN1]
 gi|301796493|emb|CBL44701.1| Alanyl-tRNA synthetase [gamma proteobacterium HdN1]
          Length = 876

 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 35/139 (25%), Positives = 61/139 (43%), Gaps = 17/139 (12%)

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSDELAQIEKKMQEIIA 131
           + HS  H++  A++ +  E     G ++  G   +DF      S  EL QIE+ + + + 
Sbjct: 560 LNHSATHLLHAALRQVLGEHVHQKGSMVTAGRLRFDFSNPSALSPAELEQIERIVNDQVR 619

Query: 132 RDSPFLKQYLSHEKAR-----ELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGP 186
            +S  + + +  ++AR      LF  K E  +V +L         T+       +LC G 
Sbjct: 620 GNSEIITEIMPIDQARAKGAMALFGEKYED-EVRVL---------TMGTDCFSVELCGGT 669

Query: 187 HVRSTGQVKKFFKLMKVAG 205
           H R TG +   F+L+   G
Sbjct: 670 HARRTGDI-GLFQLISEGG 687


>gi|66267550|gb|AAH94679.1| Eprs protein [Mus musculus]
          Length = 1477

 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 2/106 (1%)

Query: 334  FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH- 392
             A++P +       +   ++S+R+LPVRL ++ +V R E        +R R F   + H 
Sbjct: 1081 IAIRPTSETVMYPAYAKWVQSHRDLPVRLNQWCNVVRWEFKHP-QPFLRTREFLWQEGHS 1139

Query: 393  VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD 438
             F T E+  +E L+I  L   +Y++     ++    T  EK  G D
Sbjct: 1140 AFATFEEAADEVLQILELYARVYEELLAIPVVRGRKTEKEKFAGGD 1185


>gi|297539363|ref|YP_003675132.1| alanyl-tRNA synthetase [Methylotenera sp. 301]
 gi|297258710|gb|ADI30555.1| alanyl-tRNA synthetase [Methylotenera sp. 301]
          Length = 901

 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 31/125 (24%), Positives = 53/125 (42%), Gaps = 9/125 (7%)

Query: 74  RHSCAHIMAEAV-QSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIAR 132
            HS  H+M +A+ Q +   VQ     +  D   +DF    P + +E+A++E  +   I  
Sbjct: 590 NHSATHLMHKALRQVLGTHVQQKGSLVDADKTRFDFLHNAPMTDEEIAKVEAIVNAEILA 649

Query: 133 DSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTG 192
           ++P         +ARE+     +     +L      + V +   G   +LC G HV  TG
Sbjct: 650 NAP--------TQAREMDIESAQKTGAMMLFGEKYGDIVRVLDIGSTTELCGGTHVNRTG 701

Query: 193 QVKKF 197
            +  F
Sbjct: 702 DIGLF 706


>gi|293374254|ref|ZP_06620582.1| alanine--tRNA ligase [Turicibacter sanguinis PC909]
 gi|292647087|gb|EFF65069.1| alanine--tRNA ligase [Turicibacter sanguinis PC909]
          Length = 873

 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 65/136 (47%), Gaps = 17/136 (12%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           H+  H++ +A++ +        G ++  D   +DF   Q  +S+EL +IE  + E I   
Sbjct: 561 HTATHLLHQALKDVIGAHANQAGSLVSADRLRFDFTNMQGLTSEELQRIEAIVNEKIWAS 620

Query: 134 SPFLKQYLSHEKARELFE-SKKEAYKVEILESIPAK--ENVTLYRQGEW-FDLCRGPHVR 189
            P            E+FE S +EA ++  +     K  E V + + G++  +LC G HV 
Sbjct: 621 IPV-----------EVFEKSIEEAKQMGAMALFSEKYGETVRVVKAGDYSIELCGGCHVS 669

Query: 190 STGQVKKFFKLMKVAG 205
           +T ++   FK++  +G
Sbjct: 670 NTSEI-GLFKIISESG 684


>gi|327394965|dbj|BAK12387.1| alanyl-tRNA synthetase AlaS [Pantoea ananatis AJ13355]
          Length = 875

 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 10/141 (7%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY-YDFDKEQPFSSD 117
           +E +  E  R+   + HS  H++  A++ +  E     G ++ D +  +DF   +     
Sbjct: 548 LEAVVDEARRARIRLNHSATHLLHAALRQVLGEHVAQKGSLVNDKYLRFDFSHFEAMKPQ 607

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           E+ Q+E  +   I R+ P   + +  E A+        A     L      + V +   G
Sbjct: 608 EIRQVEDIVNAQIRRNLPVETRVMDLEAAK--------AKGAMALFGEKYDQQVRVLTMG 659

Query: 178 EW-FDLCRGPHVRSTGQVKKF 197
           ++  +LC G H   TG +  F
Sbjct: 660 DFSVELCGGTHAARTGDIGLF 680


>gi|254819680|ref|ZP_05224681.1| prolyl-tRNA synthetase [Mycobacterium intracellulare ATCC 13950]
          Length = 583

 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 42/196 (21%), Positives = 82/196 (41%), Gaps = 26/196 (13%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +  +A    G+  W   G ++ + +   +R ++     +EI  P 
Sbjct: 19  DAEVASHKLLIRAGYIRPVA---PGLYSWLPLGLRVLRRIEGIVREEMNAIGGQEILFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK----S 354
           +L +  ++ +  W  Y  ++F        +KD R      +  P H  +F   +K    S
Sbjct: 76  LLPRAPYEATNRWTEYGDSVF-------RLKDRR--GSDYLLGPTHEELFTLTVKGEYSS 126

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           Y++ PV L +  + YR+E +    G++RVR F   D++ F   +         H      
Sbjct: 127 YKDFPVLLYQIQNKYRDE-ARPRAGILRVREFLMKDSYSFDVDDAGLKAAYHAHR----- 180

Query: 415 YKDFGFEKIMVKLSTR 430
                +++I  +L  R
Sbjct: 181 ---EAYQRIFARLQVR 193


>gi|325844825|ref|ZP_08168277.1| alanine--tRNA ligase [Turicibacter sp. HGF1]
 gi|325489012|gb|EGC91400.1| alanine--tRNA ligase [Turicibacter sp. HGF1]
          Length = 873

 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 65/136 (47%), Gaps = 17/136 (12%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           H+  H++ +A++ +        G ++  D   +DF   Q  +S+EL +IE  + E I   
Sbjct: 561 HTATHLLHQALKDVIGAHANQAGSLVSADRLRFDFTNMQGLTSEELQRIEAIVNEKIWAS 620

Query: 134 SPFLKQYLSHEKARELFE-SKKEAYKVEILESIPAK--ENVTLYRQGEW-FDLCRGPHVR 189
            P            E+FE S +EA ++  +     K  E V + + G++  +LC G HV 
Sbjct: 621 IPV-----------EVFEKSIEEAKQMGAMALFSEKYGETVRVVKAGDYSIELCGGCHVS 669

Query: 190 STGQVKKFFKLMKVAG 205
           +T ++   FK++  +G
Sbjct: 670 NTSEI-GLFKIISESG 684


>gi|288871667|ref|ZP_06118467.2| alanine--tRNA ligase [Clostridium hathewayi DSM 13479]
 gi|288862560|gb|EFC94858.1| alanine--tRNA ligase [Clostridium hathewayi DSM 13479]
          Length = 813

 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 62/135 (45%), Gaps = 10/135 (7%)

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           E+ R      HS  H++ +A++++  E V+ A   + ED   +DF      + +E+ ++E
Sbjct: 545 EESRMNTGKNHSATHLLQKALRTVLGEHVEQAGSYVDEDRLRFDFTHFSAMTPEEIKKVE 604

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDL 182
             + E I        + +S      L E+KK        E     ENV + + G++  +L
Sbjct: 605 CLVNEKIKEALNVKTEVMS------LDEAKKSGAMALFGEKYG--ENVRVVKMGDFSTEL 656

Query: 183 CRGPHVRSTGQVKKF 197
           C G H+ +TG +  F
Sbjct: 657 CGGTHISNTGVIGSF 671


>gi|326575283|gb|EGE25211.1| alanyl-tRNA synthetase [Moraxella catarrhalis CO72]
          Length = 893

 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 34/145 (23%), Positives = 66/145 (45%), Gaps = 14/145 (9%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKM 126
           R+ +   HS  H++  A+++I  +     G ++  D   +DF  ++P +   ++QIE  +
Sbjct: 563 RASSAKNHSATHLLHAALRTILGDGVSQKGSMVSSDLLRFDFSYDKPLTEQNISQIEIMV 622

Query: 127 QEIIARDSPFLKQYLSHEKARE----LFESKKEAYKVEILESIPAKENVTLYRQGEWF-- 180
            + I  ++P   + L  + A+     +   +K    V +L         T  + G+ F  
Sbjct: 623 NQQILANTPAHVEILDIDSAKNKGAMMLFGEKYGDTVRVLSM------GTTDKDGKPFSI 676

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAG 205
           +LC G HV  TG +   FK++   G
Sbjct: 677 ELCGGLHVTRTGDI-GLFKIISEQG 700


>gi|326561060|gb|EGE11425.1| alanyl-tRNA synthetase [Moraxella catarrhalis 7169]
          Length = 893

 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 34/145 (23%), Positives = 66/145 (45%), Gaps = 14/145 (9%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKM 126
           R+ +   HS  H++  A+++I  +     G ++  D   +DF  ++P +   ++QIE  +
Sbjct: 563 RASSAKNHSATHLLHAALRTILGDGVSQKGSMVSSDLLRFDFSYDKPLTEQNISQIEIMV 622

Query: 127 QEIIARDSPFLKQYLSHEKARE----LFESKKEAYKVEILESIPAKENVTLYRQGEWF-- 180
            + I  ++P   + L  + A+     +   +K    V +L         T  + G+ F  
Sbjct: 623 NQQILANTPAHVEILDIDSAKNKGAMMLFGEKYGDTVRVLSM------GTTDKDGKPFSI 676

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAG 205
           +LC G HV  TG +   FK++   G
Sbjct: 677 ELCGGLHVTRTGDI-GLFKIISEQG 700


>gi|312077863|ref|XP_003141488.1| hypothetical protein LOAG_05904 [Loa loa]
 gi|307763347|gb|EFO22581.1| hypothetical protein LOAG_05904 [Loa loa]
          Length = 515

 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 27/112 (24%), Positives = 51/112 (45%), Gaps = 15/112 (13%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           +I+ P +  + +WQ++G W ++ + MF +    + +     F L+P     H  +    +
Sbjct: 157 KISMPILGAKEMWQKAGRWSTFESEMFHLNDKTNQV-----FCLQPT----HEEMVTKLV 207

Query: 353 KSYREL-----PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQ 399
               EL     P+ L + G  +R+E     HG +R R F  +D + F   E+
Sbjct: 208 AEQGELRKAIYPLMLYQMGPKFRDETVVG-HGFLRSREFLMNDLYSFDITEE 258


>gi|300769636|ref|ZP_07079520.1| serine--tRNA ligase [Lactobacillus plantarum subsp. plantarum ATCC
           14917]
 gi|300492789|gb|EFK27973.1| serine--tRNA ligase [Lactobacillus plantarum subsp. plantarum ATCC
           14917]
          Length = 434

 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 32/173 (18%), Positives = 73/173 (42%), Gaps = 13/173 (7%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMR--RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMF 319
           G+  +++   G  + + + S+M      K  Y EI  P +++      +G +  ++ +++
Sbjct: 171 GARFVYYKDAGALLERAVYSFMLDLHTQKQGYHEIIPPYLVNAQTMYGTGQFPKFKEDVY 230

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS--- 376
            V+ +  T+       L           + + + S  +LP         YR+E   +   
Sbjct: 231 TVESSGMTLIPTAEVPL--------TNYYANEILSEDQLPTYFTAMTPCYRSEAGSAGRD 282

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
             GL+R+  F + +   +C  E  ++E  K+ +    + ++ G    ++KLST
Sbjct: 283 TRGLIRMHQFHKVEMVKYCKPENSYDELEKLTDNAEEVLRELGLAYHVIKLST 335


>gi|25028323|ref|NP_738377.1| GTP pyrophosphokinase [Corynebacterium efficiens YS-314]
 gi|259507378|ref|ZP_05750278.1| GTP diphosphokinase [Corynebacterium efficiens YS-314]
 gi|23493608|dbj|BAC18577.1| GTP pyrophosphokinase [Corynebacterium efficiens YS-314]
 gi|259165003|gb|EEW49557.1| GTP diphosphokinase [Corynebacterium efficiens YS-314]
          Length = 761

 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 1/61 (1%)

Query: 10  PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPEDPR 68
           P G + N PV +T  D A ++   +  + +   INGK+  L   ++ G  +E+ T +DP 
Sbjct: 425 PKGDVVNLPVDSTPVDFAYAVHTEVGHRCIGAKINGKLVALETKLKSGDRVEVFTSKDPN 484

Query: 69  S 69
           +
Sbjct: 485 A 485


>gi|253570246|ref|ZP_04847655.1| alanyl-tRNA synthetase [Bacteroides sp. 1_1_6]
 gi|251840627|gb|EES68709.1| alanyl-tRNA synthetase [Bacteroides sp. 1_1_6]
          Length = 872

 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 58/132 (43%), Gaps = 12/132 (9%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEK 124
           D R+     HS  H++  A++ +  E     G ++  D   +DF   Q  + +E+ Q+E 
Sbjct: 554 DKRAACAANHSATHLLDSALREVLGEHIEQKGSLVTPDSLRFDFSHFQKVTDEEIRQVEH 613

Query: 125 KMQEIIARDSPFLKQY--LSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
            +   I  + P LK+Y  +  E+A+EL        K          E V + + G   + 
Sbjct: 614 LVNAKIRANIP-LKEYRNIPIEEAKELGAIALFGEKY--------GERVRVIQFGSSIEF 664

Query: 183 CRGPHVRSTGQV 194
           C G HV +TG +
Sbjct: 665 CGGIHVAATGNI 676


>gi|148681120|gb|EDL13067.1| glutamyl-prolyl-tRNA synthetase [Mus musculus]
          Length = 1468

 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 2/106 (1%)

Query: 334  FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH- 392
             A++P +       +   ++S+R+LPVRL ++ +V R E        +R R F   + H 
Sbjct: 1072 IAIRPTSETVMYPAYAKWVQSHRDLPVRLNQWCNVVRWEFKHP-QPFLRTREFLWQEGHS 1130

Query: 393  VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD 438
             F T E+  +E L+I  L   +Y++     ++    T  EK  G D
Sbjct: 1131 AFATFEEAADEVLQILELYARVYEELLAIPVVRGRKTEKEKFAGGD 1176


>gi|39997334|ref|NP_953285.1| GTP pyrophosphokinase [Geobacter sulfurreducens PCA]
 gi|39984225|gb|AAR35612.1| GTP pyrophosphokinase [Geobacter sulfurreducens PCA]
 gi|298506271|gb|ADI84994.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA [Geobacter
           sulfurreducens KN400]
          Length = 716

 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 1/63 (1%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI-E 60
           P ++ +  P G +K+FP  +T  D+A +I   +  + V   +NGK+  L   ++ G I E
Sbjct: 384 PEEVYVFTPRGDVKSFPKGSTPIDLAYTIHTDIGHRCVGAKVNGKLVPLKYELKNGDIVE 443

Query: 61  IIT 63
           +IT
Sbjct: 444 VIT 446


>gi|82617575|ref|NP_084011.1| bifunctional aminoacyl-tRNA synthetase [Mus musculus]
          Length = 1512

 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 2/106 (1%)

Query: 334  FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH- 392
             A++P +       +   ++S+R+LPVRL ++ +V R E        +R R F   + H 
Sbjct: 1116 IAIRPTSETVMYPAYAKWVQSHRDLPVRLNQWCNVVRWEFKHP-QPFLRTREFLWQEGHS 1174

Query: 393  VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD 438
             F T E+  +E L+I  L   +Y++     ++    T  EK  G D
Sbjct: 1175 AFATFEEAADEVLQILELYARVYEELLAIPVVRGRKTEKEKFAGGD 1220


>gi|330791908|ref|XP_003284033.1| hypothetical protein DICPUDRAFT_74994 [Dictyostelium purpureum]
 gi|325086079|gb|EGC39475.1| hypothetical protein DICPUDRAFT_74994 [Dictyostelium purpureum]
          Length = 606

 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 24/110 (21%), Positives = 53/110 (48%), Gaps = 11/110 (10%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR--TFALKPMNCPGHVAVFN 349
           +++  P+++ + LW ++G WD++  ++         +KD R   + + P +     ++  
Sbjct: 109 QKMTMPKMIPKELWDKTGRWDAFGKDLIK-------LKDRRENEYCMGPTHEEVVTSIVG 161

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKE 398
           +    +   P++L + G  +R+E      GL+R + F   D + F  TKE
Sbjct: 162 NEKLPFNNFPIKLYQIGEKFRDEIRPRF-GLLRGKEFLMKDMYSFDVTKE 210


>gi|313903917|ref|ZP_07837297.1| phosphoribulokinase/uridine kinase [Eubacterium cellulosolvens 6]
 gi|313471066|gb|EFR66388.1| phosphoribulokinase/uridine kinase [Eubacterium cellulosolvens 6]
          Length = 556

 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 61/142 (42%), Gaps = 9/142 (6%)

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAV-----QSIWPEVQVAIGPIIEDGFYYDFDKEQPFSS 116
           IT  D   +   R S   +  +AV     + + P V +       +G+YY  +K      
Sbjct: 63  ITAADRIGMDTYRRSMNLLFLKAVYDVAGKGVTPHVSLLFSN--SNGYYYTIEKIGREVD 120

Query: 117 DELAQ-IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
             LA+ I+++M E++ R  PFLK   S   ARE F  +   Y  E L        V +Y+
Sbjct: 121 ASLAESIKERMLELVERKQPFLKTQQSTRTAREFFH-QVGMYDKERLFRYRRVSMVNMYQ 179

Query: 176 QGEWFDLCRGPHVRSTGQVKKF 197
             ++ D   G  V  TG +K F
Sbjct: 180 VEKFKDYNYGYMVGDTGVLKYF 201


>gi|296112817|ref|YP_003626755.1| alanyl-tRNA synthetase [Moraxella catarrhalis RH4]
 gi|295920511|gb|ADG60862.1| alanyl-tRNA synthetase [Moraxella catarrhalis RH4]
          Length = 893

 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 34/145 (23%), Positives = 65/145 (44%), Gaps = 14/145 (9%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKM 126
           R+ +   HS  H++  A+++I  +     G ++  D   +DF  ++P +   + QIE  +
Sbjct: 563 RASSAKNHSATHLLHAALRTILGDGVSQKGSMVSGDLLRFDFSYDKPLTEQNINQIETMV 622

Query: 127 QEIIARDSPFLKQYLSHEKARE----LFESKKEAYKVEILESIPAKENVTLYRQGEWF-- 180
            + I  ++P   + L  + A+     +   +K    V +L         T  + G+ F  
Sbjct: 623 NQQILANTPAHVEILDIDSAKNKGAMMLFGEKYGDTVRVLSM------GTTDKDGKPFSI 676

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAG 205
           +LC G HV  TG +   FK++   G
Sbjct: 677 ELCGGLHVTRTGDI-GLFKIISEQG 700


>gi|294669536|ref|ZP_06734603.1| hypothetical protein NEIELOOT_01435 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291308449|gb|EFE49692.1| hypothetical protein NEIELOOT_01435 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 873

 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 40/172 (23%), Positives = 72/172 (41%), Gaps = 22/172 (12%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY-YDFDKEQPFSSDELAQIEK 124
           D R   +  HS  H+M +A++ +        G +       +D    Q  S++E+A++E+
Sbjct: 553 DIRDSIMRNHSVTHLMHKALRDVLGTHVEQKGSLQNAELTRFDISHTQGISAEEIAEVER 612

Query: 125 KMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           ++   I  + P   + +S E A++     LF  K   +             V +   G++
Sbjct: 613 RVNAAIIANVPVKVETMSIEDAQKSGAVMLFGEKYGDF-------------VRVITMGDY 659

Query: 180 -FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQE 230
             +LC G HV  TG +  FFK++   G    G      ++ +   AW   QE
Sbjct: 660 SIELCGGTHVARTGDI-GFFKIIS-EGGIAAGIRRVEAITGLAALAWAQNQE 709


>gi|218258080|ref|ZP_03474507.1| hypothetical protein PRABACTJOHN_00161 [Parabacteroides johnsonii
           DSM 18315]
 gi|218225799|gb|EEC98449.1| hypothetical protein PRABACTJOHN_00161 [Parabacteroides johnsonii
           DSM 18315]
          Length = 875

 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 28/121 (23%), Positives = 55/121 (45%), Gaps = 8/121 (6%)

Query: 75  HSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++ EA++ +    V+     +  D   +DF   Q  + +E+ ++EK + E I  +
Sbjct: 563 HSATHLLHEALREVLGTHVEQKGSYVSPDSLRFDFSHFQKVTDEEIRKVEKLVSEKIRAN 622

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQ 193
            P        E+ R +  ++ +A     L      + V + + G   +LC G H+ +TG 
Sbjct: 623 YPL-------EEHRNMPIAEAKALGAMALFGEKYGDEVRVVKYGNSIELCGGTHIPATGM 675

Query: 194 V 194
           +
Sbjct: 676 I 676


>gi|217076234|ref|YP_002333950.1| udk phosphoribulokinase family protein [Thermosipho africanus
           TCF52B]
 gi|217036087|gb|ACJ74609.1| udk phosphoribulokinase family protein [Thermosipho africanus
           TCF52B]
          Length = 558

 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 38/168 (22%), Positives = 78/168 (46%), Gaps = 6/168 (3%)

Query: 39  VAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIG 97
           VA  +N  + +L  P+ R G +E +         + +     I+   ++ ++P+  + + 
Sbjct: 39  VAAKLNNSIVELFRPIIRSGEVEFLDINSTDGFRIYQRGLLFILKHTLKKLYPDYTLKVS 98

Query: 98  PIIEDGFYYDF---DKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
             +    Y +    + ++  S  E+ +++ +M ++I  +  F+K  L   +A +LFE   
Sbjct: 99  HSVGKAIYCELKSKNNKKILSESEIKKVKDEMMKLINENKKFIKLELLKSEALKLFEELG 158

Query: 155 EAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMK 202
              KV +L+    K+ V +Y+  + FD   G    STG + K+F L K
Sbjct: 159 FNDKVSLLKY-RKKKTVKVYKVDDNFDYFYGYMPLSTG-ILKYFDLAK 204


>gi|154483386|ref|ZP_02025834.1| hypothetical protein EUBVEN_01089 [Eubacterium ventriosum ATCC
           27560]
 gi|149735896|gb|EDM51782.1| hypothetical protein EUBVEN_01089 [Eubacterium ventriosum ATCC
           27560]
          Length = 579

 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 35/154 (22%), Positives = 71/154 (46%), Gaps = 8/154 (5%)

Query: 274 KIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           +I Q + + +R ++ K D +E+  P  L   LW++SG ++S  + +        T +   
Sbjct: 48  RISQKIENIIRDEMDKLDGQEVLFPVALPGSLWEESGRYESVGSELLRF-----TDRTGS 102

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
              L   +    V +      SY + P  + +  + +R+E +    GL+RVR FT  DA+
Sbjct: 103 KMVLGMTHEEASVQLVREYANSYAKYPFMIYQIQTKFRDE-ARPRAGLIRVREFTMKDAY 161

Query: 393 VFCTKEQMFNECL-KIHNLIISIYKDFGFEKIMV 425
            F T ++   +   K+++    I+   G  ++ +
Sbjct: 162 SFHTSQEDLEQYYQKVYDAYSRIFARCGIPEVAI 195


>gi|326571434|gb|EGE21449.1| alanyl-tRNA synthetase [Moraxella catarrhalis BC7]
          Length = 893

 Score = 39.7 bits (91), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 34/145 (23%), Positives = 66/145 (45%), Gaps = 14/145 (9%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKM 126
           R+ +   HS  H++  A+++I  +     G ++  D   +DF  ++P +   ++QIE  +
Sbjct: 563 RASSAKNHSATHLLHAALRTILGDGVSQKGSMVSSDLLRFDFSYDKPLTEQNISQIEIMV 622

Query: 127 QEIIARDSPFLKQYLSHEKARE----LFESKKEAYKVEILESIPAKENVTLYRQGEWF-- 180
            + I  ++P   + L  + A+     +   +K    V +L         T  + G+ F  
Sbjct: 623 NQQILANTPAHVEILDIDSAKNKGAMMLFGEKYGDTVRVLSM------GTTDKDGKPFSI 676

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAG 205
           +LC G HV  TG +   FK++   G
Sbjct: 677 ELCGGLHVTRTGDI-GLFKIISEQG 700


>gi|194865182|ref|XP_001971302.1| GG14505 [Drosophila erecta]
 gi|190653085|gb|EDV50328.1| GG14505 [Drosophila erecta]
          Length = 458

 Score = 39.7 bits (91), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 39/166 (23%), Positives = 71/166 (42%), Gaps = 12/166 (7%)

Query: 247 RKLAREMDLFHIAEDGSGVIF--WHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHL 304
           +KL  E+ L     +G+  I     R   K    + S M   ++   ++I  P +    L
Sbjct: 30  QKLLTELGLVKSGSNGTYQIMPMAQRSVDKFIDLVQSNM---LQAGGQKITLPILTPTGL 86

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF-NHGLKSYRELPVRLA 363
           W+++G  +   +  + V+      +  + F + P +     A+       SYR+LP+RL 
Sbjct: 87  WRKTGRLEGDISEFYMVR-----DRSGKQFLMSPTHEEAVTAMLATTSPISYRQLPLRLF 141

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
           + G  +R+E   +  GLMR + F   D + F   E+   E   + N
Sbjct: 142 QIGPKFRDELK-TRFGLMRAKEFLMKDMYSFDVCEETARETYSVVN 186


>gi|21220002|ref|NP_625781.1| alanyl-tRNA synthetase [Streptomyces coelicolor A3(2)]
 gi|256788900|ref|ZP_05527331.1| alanyl-tRNA synthetase [Streptomyces lividans TK24]
 gi|289772786|ref|ZP_06532164.1| alanyl-tRNA synthetase [Streptomyces lividans TK24]
 gi|22096206|sp|Q9KXP9|SYA_STRCO RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|8249960|emb|CAB93381.1| alanine tRNA synthetase [Streptomyces coelicolor A3(2)]
 gi|289702985|gb|EFD70414.1| alanyl-tRNA synthetase [Streptomyces lividans TK24]
          Length = 890

 Score = 39.7 bits (91), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 36/140 (25%), Positives = 62/140 (44%), Gaps = 12/140 (8%)

Query: 65  EDPRSLAVIR-HSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSDELAQI 122
           +D R  A+ R HS  H+  +A++          G   + G F +DF       +  +  +
Sbjct: 562 DDRRRKAIARAHSATHLTHQALRDALGPTAAQAGSENQPGRFRFDFGSPSAVPTAVMTDV 621

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF-D 181
           E+K+ E++ARD       +       + E+KK+    E  E     E V +   G++  +
Sbjct: 622 EQKINEVLARDLDVRADVMG------IDEAKKQGAIAEFGEKY--GERVRVVTIGDFSKE 673

Query: 182 LCRGPHVRSTGQVKKFFKLM 201
           LC G HV +T Q+    KL+
Sbjct: 674 LCGGTHVHNTAQL-GLVKLL 692


>gi|313904037|ref|ZP_07837417.1| alanyl-tRNA synthetase [Eubacterium cellulosolvens 6]
 gi|313471186|gb|EFR66508.1| alanyl-tRNA synthetase [Eubacterium cellulosolvens 6]
          Length = 897

 Score = 39.7 bits (91), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 62/131 (47%), Gaps = 11/131 (8%)

Query: 70  LAVIR-HSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQ 127
           LA+ R HS  H+M +A++ +    V+ A      D   +DF   Q  +S+E+ ++E  + 
Sbjct: 578 LAIARNHSATHLMQKALREVLGTHVEQAGSYQDADRTRFDFSHFQAMTSEEIRKVEDMVN 637

Query: 128 EIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGP 186
           E I+       Q ++      L E+KK        E     + V + + G++  +LC G 
Sbjct: 638 EKISEGLAVTTQVMT------LDEAKKTGAMALFGEKYG--DEVRVVKMGDFSTELCGGT 689

Query: 187 HVRSTGQVKKF 197
           HV +T Q+ +F
Sbjct: 690 HVENTQQIAQF 700


>gi|304386989|ref|ZP_07369247.1| alanine--tRNA ligase [Neisseria meningitidis ATCC 13091]
 gi|304338946|gb|EFM05042.1| alanine--tRNA ligase [Neisseria meningitidis ATCC 13091]
          Length = 885

 Score = 39.7 bits (91), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 37/178 (20%), Positives = 77/178 (43%), Gaps = 18/178 (10%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSS 116
           S+     ++ R+  +  HS  H+M +A++ +  E V+     +  +   +D    Q  ++
Sbjct: 556 SVTAKVDDEIRNANMRNHSATHLMHKALRDVLGEHVEQKGSLVTAESTRFDISHPQAVTA 615

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARE----LFESKKEAYKVEILESIPAKENVT 172
           +E+A++E+++ E I  +       +S E A++    +   +K   +V +L+         
Sbjct: 616 EEIAEVERRVNEAILANVAVNAAIMSMEDAQKTGAMMLFGEKYGDEVRVLQ--------- 666

Query: 173 LYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQE 230
               G   +LC G HV  TG +   FK++   G    G      ++ +    W  +QE
Sbjct: 667 --MGGFSTELCGGTHVSRTGDI-GLFKIIS-EGGIAAGVRRIEAITGLNALKWAQEQE 720


>gi|265751926|ref|ZP_06087719.1| alanyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
 gi|263236718|gb|EEZ22188.1| alanyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
          Length = 157

 Score = 39.7 bits (91), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 27/124 (21%), Positives = 58/124 (46%), Gaps = 9/124 (7%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDS 134
           H+  H++   + +++   +     I       DF  +      ++ +IE  + E++ R+ 
Sbjct: 23  HTTEHVINRTMVNLFGCGRAISAHIERKKSKLDFALQTCPEETDITRIENTVNEVLRRNL 82

Query: 135 PFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD-LCRGPHVRSTGQ 193
           P   +++S E+A   F+ K+   K        A E V + + G++ + LC G HV++T +
Sbjct: 83  PVTMEFISQEEAIGRFDMKRLPEK--------ASETVRIVKVGDYDECLCIGQHVKNTSE 134

Query: 194 VKKF 197
           +  F
Sbjct: 135 IGTF 138


>gi|241759977|ref|ZP_04758075.1| alanine--tRNA ligase [Neisseria flavescens SK114]
 gi|241319431|gb|EER55861.1| alanine--tRNA ligase [Neisseria flavescens SK114]
          Length = 874

 Score = 39.7 bits (91), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 37/178 (20%), Positives = 77/178 (43%), Gaps = 18/178 (10%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSS 116
           S+     ++ R+  +  HS  H+M +A++ +  E V+     +  +   +D    Q  ++
Sbjct: 545 SVTAKVDDEIRNANMRNHSATHLMHKALRDVLGEHVEQKGSLVTAESTRFDISHPQAVTA 604

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARE----LFESKKEAYKVEILESIPAKENVT 172
           +E+A++E+++ E I  +       +S E A++    +   +K   +V +L+         
Sbjct: 605 EEIAEVERRVNEAILANVAVNAAIMSMEDAQKTGAMMLFGEKYGDEVRVLQ--------- 655

Query: 173 LYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQE 230
               G   +LC G HV  TG +   FK++   G    G      ++ +    W  +QE
Sbjct: 656 --MGGFSTELCGGTHVSRTGDI-GLFKIIS-EGGIAAGVRRIEAITGLNALKWAQEQE 709


>gi|223461182|gb|AAI41050.1| Glutamyl-prolyl-tRNA synthetase [Mus musculus]
          Length = 1512

 Score = 39.7 bits (91), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 2/106 (1%)

Query: 334  FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH- 392
             A++P +       +   ++S+R+LPVRL ++ +V R E        +R R F   + H 
Sbjct: 1116 IAIRPTSETVMYPAYAKWVQSHRDLPVRLNQWCNVVRWEFKHP-QPFLRTREFLWQEGHS 1174

Query: 393  VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD 438
             F T E+  +E L+I  L   +Y++     ++    T  EK  G D
Sbjct: 1175 AFATFEEAADEVLQILELYARVYEELLAIPVVRGRKTEKEKFAGGD 1220


>gi|195492914|ref|XP_002094195.1| GE21696 [Drosophila yakuba]
 gi|194180296|gb|EDW93907.1| GE21696 [Drosophila yakuba]
          Length = 458

 Score = 39.7 bits (91), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 29/119 (24%), Positives = 55/119 (46%), Gaps = 7/119 (5%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF-NH 350
           ++I  P +    LW+++G  +   +  + V+      +  + F + P +     A+  + 
Sbjct: 74  QKITLPILTPTALWRKTGRLEGDISEFYMVR-----DRSGKQFLMSPTHEEAVTAMLAST 128

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
              SYR+LP+RL + G  +R+E   +  GLMR + F   D + F   E+   E   + N
Sbjct: 129 SPISYRQLPLRLFQIGPKFRDELK-TRFGLMRAKEFLMKDMYSFDVCEETARETYSVVN 186


>gi|331090638|ref|ZP_08339489.1| hypothetical protein HMPREF9477_00132 [Lachnospiraceae bacterium
           2_1_46FAA]
 gi|330401078|gb|EGG80673.1| hypothetical protein HMPREF9477_00132 [Lachnospiraceae bacterium
           2_1_46FAA]
          Length = 766

 Score = 39.7 bits (91), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 1/67 (1%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEII 62
           D+    P+G +KN P  +T  D A +I  ++  K V   +NGK+  +   ++ G  IE++
Sbjct: 423 DVYCFTPNGDVKNLPNGSTPVDFAYAIHSAVGNKMVGARVNGKLVPIDYKIQNGDRIEVL 482

Query: 63  TPEDPRS 69
           T ++ + 
Sbjct: 483 TSQNSKG 489


>gi|295091706|emb|CBK77813.1| Predicted metal-dependent hydrolases related to alanyl-tRNA
           synthetase HxxxH domain [Clostridium cf. saccharolyticum
           K10]
          Length = 387

 Score = 39.7 bits (91), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 61/137 (44%), Gaps = 18/137 (13%)

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           +HS  HI++  + S++    V      E+      D   P S +EL +IE+K    +  +
Sbjct: 95  QHSGEHIVSGLIHSVYGYDNVGFHMGREE---TTIDLNGPMSWEELMEIEEKANRAVWAN 151

Query: 134 SPFLKQYLSHEKAREL-FESKKE-AYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRST 191
            P    Y S E+  +L + SKKE + +V I+E +P  +             C G HV  T
Sbjct: 152 IPLKITYPSEEELEKLDYRSKKELSGQVRIVE-VPGVDTCA----------CCGTHVAYT 200

Query: 192 GQVK--KFFKLMKVAGA 206
           G++   KF  LM   G 
Sbjct: 201 GEIGVIKFLSLMNYKGG 217


>gi|300708012|ref|XP_002996195.1| hypothetical protein NCER_100753 [Nosema ceranae BRL01]
 gi|239605474|gb|EEQ82524.1| hypothetical protein NCER_100753 [Nosema ceranae BRL01]
          Length = 499

 Score = 39.7 bits (91), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 30/121 (24%), Positives = 58/121 (47%), Gaps = 4/121 (3%)

Query: 319 FAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLH 378
           +  KC ++ + +    A++P +       F   + S+R+LP+++ ++ ++ R E  G+  
Sbjct: 95  WITKCGNEVLHE--PVAIRPTSETVMYPSFARWISSHRDLPLKVNQWCNILRWELRGTT- 151

Query: 379 GLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGS 437
            L+R +     + H     KE+   E L I +L   +YK+     ++  L T  EK  GS
Sbjct: 152 PLIRSKEILWQEGHTAHIDKEEADKEVLDILDLYYRMYKELLAVPVIKGLKTETEKFAGS 211

Query: 438 D 438
           D
Sbjct: 212 D 212


>gi|205830482|sp|Q3SLA9|SYA_THIDA RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
          Length = 872

 Score = 39.7 bits (91), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 31/146 (21%), Positives = 69/146 (47%), Gaps = 18/146 (12%)

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIE 123
           E  R+  +  HS  H+M +A++ +  E     G +++ +   +DF +  P ++ ++ ++E
Sbjct: 551 ETARARTMRNHSVTHLMHKALREVLGEHVQQKGSLVDSEKTRFDFVQPSPMTAAQIREVE 610

Query: 124 KKMQEIIARDSPFLKQYLSHEKARE----LFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            ++   I  ++P   + +  E A++    +   +K   +V +L+   ++E          
Sbjct: 611 ARVNAEILVNTPTQARVMGIEDAQKTGAMMLFGEKYGDEVRVLDIGSSRE---------- 660

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAG 205
             LC G HV  TG +   FK++  +G
Sbjct: 661 --LCGGTHVARTGDI-GLFKIVSESG 683


>gi|224457282|ref|ZP_03665755.1| alanyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|254370663|ref|ZP_04986668.1| alanine-tRNA ligase [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254874986|ref|ZP_05247696.1| alanine-tRNA ligase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|151568906|gb|EDN34560.1| alanine-tRNA ligase [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254840985|gb|EET19421.1| alanine-tRNA ligase [Francisella tularensis subsp. tularensis
           MA00-2987]
          Length = 865

 Score = 39.7 bits (91), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 32/136 (23%), Positives = 58/136 (42%), Gaps = 10/136 (7%)

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFSSDELAQI 122
            + PR      HS  H++ +A++ +        G ++ E+   +DF  ++  S  ++ QI
Sbjct: 543 SDKPRLATAANHSATHLLHKALKLVLGGHAEQKGSLVDENRLRFDFTHDKAISRSKIEQI 602

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FD 181
           E  + + I  + P      S +KA+ L          E L      + V +   G++  +
Sbjct: 603 ELLVNQQIRANYPVTTIETSQQKAKSL--------GAEALFGEKYGDIVRVISMGDFSIE 654

Query: 182 LCRGPHVRSTGQVKKF 197
           LC G HV  TG +  F
Sbjct: 655 LCGGTHVAYTGDIGLF 670


>gi|68475162|ref|XP_718299.1| potential proline-tRNA synthetase fragment [Candida albicans
           SC5314]
 gi|68475355|ref|XP_718200.1| potential proline-tRNA synthetase fragment [Candida albicans
           SC5314]
 gi|46439957|gb|EAK99268.1| potential proline-tRNA synthetase fragment [Candida albicans
           SC5314]
 gi|46440060|gb|EAK99370.1| potential proline-tRNA synthetase fragment [Candida albicans
           SC5314]
          Length = 169

 Score = 39.7 bits (91), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 63/150 (42%), Gaps = 29/150 (19%)

Query: 255 LFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD--YEEINTPQVLDQHLWQQSGHWD 312
           L +I    +G++ W + G  I Q  IS + R+  D+  +EE++   +  + LW+ +  WD
Sbjct: 39  LGYITYPRAGLVNWSKMGLLI-QNKISQIIRQRMDEIQFEEVSLSLISHKELWKLTNRWD 97

Query: 313 SYRA------NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFG 366
                         V  A++ I +                V    L+SY+  P+ L +  
Sbjct: 98  QEEIFKLVGDEYLLVPTAEEEITN---------------YVKKQFLESYKNFPLALYQIN 142

Query: 367 SVYRNE--PSGSLHGLMRVRGFTQDDAHVF 394
             +RNE  P G   GL+R + F   DA  F
Sbjct: 143 PKFRNEKRPRG---GLLRGKEFLMKDALFF 169


>gi|242373918|ref|ZP_04819492.1| alanyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
 gi|242348472|gb|EES40074.1| alanyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
          Length = 876

 Score = 39.7 bits (91), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 33/146 (22%), Positives = 64/146 (43%), Gaps = 17/146 (11%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEK 124
           D R      HS  H++ +A++ +  +     G ++E D   +DF    P S +E+ Q+E+
Sbjct: 556 DERRAIQKNHSATHLLHQALKEVLGDHVNQAGSLVEADRLRFDFSHFGPMSQEEIDQVER 615

Query: 125 KMQEIIARDSPFLKQYLSHEKAREL----FESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           ++ E I R      Q +  ++A+ +       +K    V ++   P              
Sbjct: 616 RVNEEIWRGIDVRIQEMGIDEAKSMGAMALFGEKYGDIVRVVNMAPFS-----------I 664

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGA 206
           +LC G HV +T ++   FK++  +G 
Sbjct: 665 ELCGGIHVNNTSEI-GLFKIVSESGT 689


>gi|224540053|ref|ZP_03680592.1| hypothetical protein BACCELL_04966 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224518331|gb|EEF87436.1| hypothetical protein BACCELL_04966 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 155

 Score = 39.7 bits (91), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 31/143 (21%), Positives = 67/143 (46%), Gaps = 17/143 (11%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDS 134
           H+C HI+   + +++   +     I       D+  E   + +++ ++E+ +  +IA+  
Sbjct: 19  HTCEHIVNRTMMNLFGCGRSVSAHIERKKSKLDYALETAPTEEDVKRLEEAVNAVIAQGL 78

Query: 135 PFLKQYLSHEKARELFESKKEAYKVEILESIP--AKENVTLYRQGEWFD-LCRGPHVRST 191
               ++++ E+A+  F+ K+          +P  A E V + + G + + LC G HV++T
Sbjct: 79  DVTTEFITQEEAQGRFDLKR----------LPEDASETVRIVKVGNYDECLCLGTHVKNT 128

Query: 192 GQVKKFFKLMKVAGAYWRGDSNR 214
            +V  F    KV    W  ++ R
Sbjct: 129 SEVGTF----KVISHDWNEEAKR 147


>gi|197284276|ref|YP_002150148.1| alanyl-tRNA synthetase [Proteus mirabilis HI4320]
 gi|227357820|ref|ZP_03842168.1| alanyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
 gi|194681763|emb|CAR40964.1| alanyl-tRNA synthetase [Proteus mirabilis HI4320]
 gi|227161930|gb|EEI46948.1| alanyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
          Length = 875

 Score = 39.7 bits (91), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 32/140 (22%), Positives = 61/140 (43%), Gaps = 21/140 (15%)

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY-YDFDKEQPFSSDELAQIEKKMQEIIA 131
           + HS  H++  A++ +        G ++ D +  +DF   +    ++L +IE  +   I 
Sbjct: 562 LNHSATHLLHAALRQVLGTHVTQKGSLVNDKYLRFDFSHFEAVKPEQLREIEDIVNAQIR 621

Query: 132 RDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRG 185
            +SP + + +  E A++     LF  K E             E V +   G++  +LC G
Sbjct: 622 LNSPVVTELMDLEDAKQKGAMALFGEKYE-------------ERVRVLTMGDFSTELCGG 668

Query: 186 PHVRSTGQVKKFFKLMKVAG 205
            H   TG +   F++M  +G
Sbjct: 669 THAARTGDI-GLFRIMSESG 687


>gi|326567519|gb|EGE17634.1| alanyl-tRNA synthetase [Moraxella catarrhalis BC1]
          Length = 893

 Score = 39.7 bits (91), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 34/145 (23%), Positives = 66/145 (45%), Gaps = 14/145 (9%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKM 126
           R+ +   HS  H++  A+++I  +     G ++  D   +DF  ++P +   ++QIE  +
Sbjct: 563 RASSAKNHSATHLLHAALRTILGDGVSQKGSMVSSDLLRFDFSYDKPLTEQNISQIEIMV 622

Query: 127 QEIIARDSPFLKQYLSHEKARE----LFESKKEAYKVEILESIPAKENVTLYRQGEWF-- 180
            + I  ++P   + L  + A+     +   +K    V +L         T  + G+ F  
Sbjct: 623 NQQILANTPAHVEILDIDSAKNKGAMMLFGEKYGDTVRVLSM------GTTDKDGKPFSI 676

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAG 205
           +LC G HV  TG +   FK++   G
Sbjct: 677 ELCGGLHVTRTGDI-GLFKIVSEQG 700


>gi|291522836|emb|CBK81129.1| (p)ppGpp synthetase, RelA/SpoT family [Coprococcus catus GD/7]
          Length = 770

 Score = 39.7 bits (91), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 1/60 (1%)

Query: 10  PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPEDPR 68
           P G +KN P  +T  D A SI  ++  K V   +NGK+ ++   ++ G  +E++T  + +
Sbjct: 427 PAGDVKNLPTGSTPIDFAYSIHSAVGNKMVGARVNGKLVNIDYVIKNGDRVEVLTSANSK 486


>gi|297198338|ref|ZP_06915735.1| alanyl-tRNA synthetase [Streptomyces sviceus ATCC 29083]
 gi|197714390|gb|EDY58424.1| alanyl-tRNA synthetase [Streptomyces sviceus ATCC 29083]
          Length = 890

 Score = 39.7 bits (91), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 40/162 (24%), Positives = 69/162 (42%), Gaps = 15/162 (9%)

Query: 68  RSLAVIR-HSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSDELAQIEKK 125
           R  A+ R HS  H+  +A++          G   + G F +DF       +  +  +E+K
Sbjct: 565 RRTAIARAHSATHLTHQALRDALGPTAAQAGSENQPGRFRFDFGSPSAVPTAVMTDVEQK 624

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF-DLCR 184
           + E++ARD       +       + E+KK+    E  E     E V +   G++  +LC 
Sbjct: 625 INEVLARDLDVRADVMG------IDEAKKQGAIAEFGEKY--GERVRVVTIGDFSKELCG 676

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWN 226
           G HV +T Q      L+K+ G    G   R + + +   A+N
Sbjct: 677 GTHVHNTSQ----LGLVKLLGESSIGSGVRRIEALVGVDAYN 714


>gi|282878226|ref|ZP_06287022.1| alanine--tRNA ligase [Prevotella buccalis ATCC 35310]
 gi|281299644|gb|EFA92017.1| alanine--tRNA ligase [Prevotella buccalis ATCC 35310]
          Length = 872

 Score = 39.7 bits (91), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 31/137 (22%), Positives = 59/137 (43%), Gaps = 9/137 (6%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D R      H+  H++  A++ +  + V+     +  D   +DF   Q  + +E+ Q+E+
Sbjct: 553 DKRDACAANHTATHLLDYALKQVLGDHVEQKGSYVSPDTLRFDFSHFQKVTDEEIRQVER 612

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
            +  +I +D P        E      E  KE   + +       + V + R G   + C 
Sbjct: 613 LVNNLIRQDIPL------DEHRDTPIEEAKEMGAIALFGE-KYGDKVRVVRFGPSCEFCG 665

Query: 185 GPHVRSTGQVKKFFKLM 201
           G H +STG++   FK++
Sbjct: 666 GIHAKSTGRI-GLFKIL 681


>gi|193216583|ref|YP_001999825.1| alanyl-tRNA synthetase [Mycoplasma arthritidis 158L3-1]
 gi|193001906|gb|ACF07121.1| alanyl-tRNA synthetase [Mycoplasma arthritidis 158L3-1]
          Length = 885

 Score = 39.7 bits (91), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 75/157 (47%), Gaps = 26/157 (16%)

Query: 56  EGSIEIITP-----EDPRSLAVIR-HSCAHIMAEAVQSIWPEVQV-AIGPIIE-DGFYYD 107
           +GSI+   P     ++P+ L   R HS  H+M  A++  +P   +  +G  I  D F +D
Sbjct: 533 KGSIDASQPIECYVDEPKRLNFARNHSSTHLMYHALRETYPNEPIEQLGSNISFDHFTFD 592

Query: 108 FDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELF------ESK-KEAYKVE 160
           F  +   +  E  QIEK M+  IA  +       + +KA+E+       ES+  +A KV 
Sbjct: 593 FGLDHRPTVQECRQIEKIMRSYIAFSAKRNYIITTIKKAQEMGAWMTIEESEYHDANKVR 652

Query: 161 ILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
           ++E     EN+T        D+C G HV ++  ++ F
Sbjct: 653 VVEF----ENITK-------DVCGGTHVPNSSVIEDF 678


>gi|71902035|ref|ZP_00684078.1| Alanine--tRNA ligase [Xylella fastidiosa Ann-1]
 gi|71728198|gb|EAO30386.1| Alanine--tRNA ligase [Xylella fastidiosa Ann-1]
          Length = 528

 Score = 39.7 bits (91), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 30/144 (20%), Positives = 62/144 (43%), Gaps = 20/144 (13%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKM 126
           R +  + HS  H++  A++S++       G ++  D   +DF   +P S+ ++  IE+ +
Sbjct: 209 RKMVALNHSATHLLHCALRSVFGNHVAQKGSLVAPDRLRFDFSHFEPISAVQMTLIERMV 268

Query: 127 QEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
            + +  +   + + +  + A +     LF  K               E+V +   G   +
Sbjct: 269 NDEVRANHLVMIEQMGMQAALDAGAMALFGEKY-------------GEHVRVVTMGTSVE 315

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAG 205
           LC G H+  TG +   FK++   G
Sbjct: 316 LCGGTHITRTGDI-GLFKIISECG 338


>gi|221214968|ref|ZP_03587936.1| alanyl-tRNA synthetase [Burkholderia multivorans CGD1]
 gi|221165195|gb|EED97673.1| alanyl-tRNA synthetase [Burkholderia multivorans CGD1]
          Length = 874

 Score = 39.7 bits (91), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 31/134 (23%), Positives = 65/134 (48%), Gaps = 19/134 (14%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H+M +A++ +        G +++ D   +DF    P + DE+ ++E+ + + I  +
Sbjct: 564 HSATHLMHKALREVLGSHVQQKGSLVDADKTRFDFAHNAPLTDDEIRRVEQIVNDEILAN 623

Query: 134 SPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           +P + + + +++A +     LF  +K   +V +L+   ++E            LC G HV
Sbjct: 624 APGIVRVMPYDEAVKGGAMALF-GEKYGDEVRVLDLGFSRE------------LCGGTHV 670

Query: 189 RSTGQVKKFFKLMK 202
             TG +  F  +M+
Sbjct: 671 SRTGDIGLFKIVME 684


>gi|56708179|ref|YP_170075.1| alanyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110670650|ref|YP_667207.1| alanyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC198]
 gi|81597416|sp|Q5NFW7|SYA_FRATT RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|123169359|sp|Q14HB9|SYA_FRAT1 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|56604671|emb|CAG45729.1| Alanyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110320983|emb|CAL09112.1| Alanyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC198]
 gi|282159393|gb|ADA78784.1| Alanyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           NE061598]
          Length = 865

 Score = 39.7 bits (91), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 32/136 (23%), Positives = 58/136 (42%), Gaps = 10/136 (7%)

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFSSDELAQI 122
            + PR      HS  H++ +A++ +        G ++ E+   +DF  ++  S  ++ QI
Sbjct: 543 SDKPRLATAANHSATHLLHKALKLVLGGHAEQKGSLVDENRLRFDFTHDKAISRSKIEQI 602

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FD 181
           E  + + I  + P      S +KA+ L          E L      + V +   G++  +
Sbjct: 603 ELLVNQQIRANYPVTTIETSQQKAKSL--------GAEALFGEKYGDIVRVISMGDFSIE 654

Query: 182 LCRGPHVRSTGQVKKF 197
           LC G HV  TG +  F
Sbjct: 655 LCGGTHVAYTGDIGLF 670


>gi|238916897|ref|YP_002930414.1| alanyl-tRNA synthetase [Eubacterium eligens ATCC 27750]
 gi|238872257|gb|ACR71967.1| alanyl-tRNA synthetase [Eubacterium eligens ATCC 27750]
          Length = 880

 Score = 39.7 bits (91), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 34/145 (23%), Positives = 66/145 (45%), Gaps = 21/145 (14%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKM 126
           R+     HS  H++ +A++ +  +     G  ++ D   +DF   Q  + +E+A++E  +
Sbjct: 559 RADTCKNHSATHLLQKALRIVLGDHVEQKGSYVDPDRLRFDFTHFQSMTKEEIAKVEDIV 618

Query: 127 QEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWF- 180
            E IA   P +   ++ E+A++     LF  K               E V +   G++  
Sbjct: 619 NEKIAEAIPVVTDVMTIEEAKKTGAMALFGEK-------------YGEKVRVVAMGDFSK 665

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAG 205
           + C G HV +T  + + FK++  AG
Sbjct: 666 EFCGGTHVANTANI-RLFKIVSEAG 689


>gi|237811944|ref|YP_002896395.1| alanine--tRNA ligase [Burkholderia pseudomallei MSHR346]
 gi|237502943|gb|ACQ95261.1| alanine--tRNA ligase [Burkholderia pseudomallei MSHR346]
          Length = 874

 Score = 39.7 bits (91), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 32/137 (23%), Positives = 64/137 (46%), Gaps = 20/137 (14%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H+M +A++ +        G +++ D   +DF    P + DE+ ++E  + E +  +
Sbjct: 564 HSATHLMHKALRDVLGSHVQQKGSLVDADKTRFDFAHNAPLTDDEIRRVEAIVNEQVLAN 623

Query: 134 SPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           +P + + + ++ A +     LF  +K   +V +L+   ++E            LC G HV
Sbjct: 624 APGIVRVMPYDDAVKGGAMALF-GEKYGDEVRVLDLGFSRE------------LCGGTHV 670

Query: 189 RSTGQVKKFFKLMKVAG 205
             TG +   FK++   G
Sbjct: 671 HRTGDI-GLFKIVAEGG 686


>gi|221202097|ref|ZP_03575133.1| alanyl-tRNA synthetase [Burkholderia multivorans CGD2M]
 gi|221204772|ref|ZP_03577789.1| alanyl-tRNA synthetase [Burkholderia multivorans CGD2]
 gi|221175629|gb|EEE08059.1| alanyl-tRNA synthetase [Burkholderia multivorans CGD2]
 gi|221178180|gb|EEE10591.1| alanyl-tRNA synthetase [Burkholderia multivorans CGD2M]
          Length = 874

 Score = 39.7 bits (91), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 31/134 (23%), Positives = 65/134 (48%), Gaps = 19/134 (14%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H+M +A++ +        G +++ D   +DF    P + DE+ ++E+ + + I  +
Sbjct: 564 HSATHLMHKALREVLGSHVQQKGSLVDADKTRFDFAHNAPLTDDEIRRVEQIVNDEILAN 623

Query: 134 SPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           +P + + + +++A +     LF  +K   +V +L+   ++E            LC G HV
Sbjct: 624 APGIVRVMPYDEAVKGGAMALF-GEKYGDEVRVLDLGFSRE------------LCGGTHV 670

Query: 189 RSTGQVKKFFKLMK 202
             TG +  F  +M+
Sbjct: 671 SRTGDIGLFKIVME 684


>gi|166365301|ref|YP_001657574.1| alanyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
 gi|205830148|sp|B0JI84|SYA_MICAN RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|166087674|dbj|BAG02382.1| alanyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
          Length = 874

 Score = 39.7 bits (91), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 34/142 (23%), Positives = 62/142 (43%), Gaps = 15/142 (10%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKM 126
           R  A   H+  H++  A++ +        G ++  D   +DF+  +P +S EL Q+E+++
Sbjct: 552 RRRAQANHTATHLLQSALKKLVDGGISQAGSLVSFDRLRFDFNCPRPLTSSELQQVEEQI 611

Query: 127 QEIIAR--DSPFLKQYLSHEKARELFESKKEAYKVEI-LESIPAKENVTLYRQGEWFDLC 183
              IA   D+      L   K +       E Y  E+ +  IP+             +LC
Sbjct: 612 NTWIAEAHDTQIAVMGLEEAKQKGAIAMFGEKYGSEVRVIDIPSVS----------MELC 661

Query: 184 RGPHVRSTGQVKKFFKLMKVAG 205
            G HV++T ++   FK++   G
Sbjct: 662 GGTHVKNTAEI-GLFKIISETG 682


>gi|154493963|ref|ZP_02033283.1| hypothetical protein PARMER_03308 [Parabacteroides merdae ATCC
           43184]
 gi|154086223|gb|EDN85268.1| hypothetical protein PARMER_03308 [Parabacteroides merdae ATCC
           43184]
          Length = 875

 Score = 39.7 bits (91), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 28/121 (23%), Positives = 55/121 (45%), Gaps = 8/121 (6%)

Query: 75  HSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++ EA++ +    V+     +  D   +DF   Q  + +E+ ++EK + E I  +
Sbjct: 563 HSATHLLHEALREVLGTHVEQKGSYVSPDSLRFDFSHFQKVTDEEIRKVEKLVSEKIRAN 622

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQ 193
            P        E+ R +  ++ +A     L      + V + + G   +LC G H+ +TG 
Sbjct: 623 YPL-------EEHRNMPIAEAKALGAMALFGEKYGDEVRVVKYGNSIELCGGTHIPATGM 675

Query: 194 V 194
           +
Sbjct: 676 I 676


>gi|120403299|ref|YP_953128.1| prolyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1]
 gi|152112935|sp|A1T7H2|SYP_MYCVP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|119956117|gb|ABM13122.1| prolyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1]
          Length = 585

 Score = 39.7 bits (91), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 32/150 (21%), Positives = 63/150 (42%), Gaps = 11/150 (7%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           G G+  W   G K+ + + + +R ++     +EI  P +L +  ++ +  W  Y   +F 
Sbjct: 38  GPGLYSWLPLGLKVLRKIENIVRNEMNAIGGQEILFPALLPRAPYETTNRWTEYGDTLF- 96

Query: 321 VKCADDTIKDLRT--FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLH 378
                  ++D R   + L P +             SY++ P+RL +  + YR+E +    
Sbjct: 97  ------RLQDRRNNDYLLGPTHEEMFTLTVKGEYSSYKDFPLRLYQIQNKYRDE-ARPRA 149

Query: 379 GLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
           G++R R F   D++ F   +         H
Sbjct: 150 GILRGREFLMKDSYSFDIDDDGLKNAYIAH 179


>gi|88602971|ref|YP_503149.1| glycyl-tRNA synthetase [Methanospirillum hungatei JF-1]
 gi|88188433|gb|ABD41430.1| glycyl-tRNA synthetase [Methanospirillum hungatei JF-1]
          Length = 572

 Score = 39.7 bits (91), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 2/64 (3%)

Query: 336 LKPMNCPGHVAVFNHGLKSYRE-LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           L+P    G    F   L+ YR+ LP    + G  YRNE S    G++R+R FTQ +A +F
Sbjct: 160 LRPETAQGIFVDFGRLLRFYRDKLPFGTVQIGRSYRNEIS-PRQGMIRLREFTQAEAEIF 218

Query: 395 CTKE 398
              E
Sbjct: 219 VHPE 222


>gi|291539586|emb|CBL12697.1| (p)ppGpp synthetase, RelA/SpoT family [Roseburia intestinalis
           XB6B4]
          Length = 770

 Score = 39.7 bits (91), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 2/68 (2%)

Query: 3   SDIKLTF-PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IE 60
           SD    F P G +KN P  +T  D A SI  ++  K +   +NGK+  +   ++ G  +E
Sbjct: 425 SDTVFCFTPTGDVKNLPTGSTPIDFAYSIHSAVGNKMIGAKVNGKLVPIDYIIQNGDRVE 484

Query: 61  IITPEDPR 68
           +IT ++ +
Sbjct: 485 VITSQNSK 492


>gi|120611698|ref|YP_971376.1| alanyl-tRNA synthetase [Acidovorax citrulli AAC00-1]
 gi|205829963|sp|A1TRL4|SYA_ACIAC RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|120590162|gb|ABM33602.1| alanyl-tRNA synthetase [Acidovorax citrulli AAC00-1]
          Length = 948

 Score = 39.7 bits (91), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 65/143 (45%), Gaps = 18/143 (12%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKM 126
           R+  +  HS  HIM +A++ +    VQ     +  +   +DF    P +  ++ +IE+++
Sbjct: 631 RAATMRNHSVTHIMHKALREVLGSHVQQKGSLVNAERTRFDFAHNAPVTDAQIREIERRV 690

Query: 127 QEIIARDSPFLKQYLSHEKARE----LFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
            E I  ++P   + +  E A++    +   +K    V +L+   ++E            L
Sbjct: 691 NEEILANTPTGARVMDIESAQKTGAMMLFGEKYGETVRVLDIGTSRE------------L 738

Query: 183 CRGPHVRSTGQVKKFFKLMKVAG 205
           C G HV  TG +   FK++  +G
Sbjct: 739 CGGTHVARTGDI-GLFKVVGESG 760


>gi|126441822|ref|YP_001058678.1| alanyl-tRNA synthetase [Burkholderia pseudomallei 668]
 gi|205830005|sp|A3N8K7|SYA_BURP6 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|126221315|gb|ABN84821.1| alanine--tRNA ligase [Burkholderia pseudomallei 668]
          Length = 874

 Score = 39.7 bits (91), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 32/137 (23%), Positives = 64/137 (46%), Gaps = 20/137 (14%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H+M +A++ +        G +++ D   +DF    P + DE+ ++E  + E +  +
Sbjct: 564 HSATHLMHKALRDVLGSHVQQKGSLVDADKTRFDFAHNAPLTDDEIRRVEAIVNEQVLAN 623

Query: 134 SPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           +P + + + ++ A +     LF  +K   +V +L+   ++E            LC G HV
Sbjct: 624 APGIVRVMPYDDAVKGGAMALF-GEKYGDEVRVLDLGFSRE------------LCGGTHV 670

Query: 189 RSTGQVKKFFKLMKVAG 205
             TG +   FK++   G
Sbjct: 671 HRTGDI-GLFKIVAEGG 686


>gi|302784009|ref|XP_002973777.1| hypothetical protein SELMODRAFT_414117 [Selaginella moellendorffii]
 gi|300158815|gb|EFJ25437.1| hypothetical protein SELMODRAFT_414117 [Selaginella moellendorffii]
          Length = 562

 Score = 39.7 bits (91), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 18/48 (37%), Positives = 32/48 (66%), Gaps = 4/48 (8%)

Query: 82  AEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           +E +Q+++P+ +V IGP IE+    DFD ++P    +L +I+ +M EI
Sbjct: 284 SEDLQTLYPDAKVTIGPWIEN----DFDLKEPLPDKDLKKIKMEMTEI 327


>gi|238651102|ref|YP_002916960.1| alanyl-tRNA synthetase [Rickettsia peacockii str. Rustic]
 gi|238625200|gb|ACR47906.1| alanyl-tRNA synthetase [Rickettsia peacockii str. Rustic]
          Length = 878

 Score = 39.7 bits (91), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 31/132 (23%), Positives = 56/132 (42%), Gaps = 20/132 (15%)

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY-YDFDKEQPFSSDELAQIEKKMQEIIA 131
           I HS  HI+   +  +  +  +  G ++   +  +D    +  +++E+  IE K+ EII 
Sbjct: 565 IHHSATHILHAVLHEVLGKHVIQKGSLVAPTYLRFDISHSKTVTNEEITLIEDKVNEIIR 624

Query: 132 RDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRG 185
            +       ++ E A +     LF  K ++              V + + GE   +LC G
Sbjct: 625 DNHEVTTTLMATEDAVKQGATALFGEKYDS-------------EVRVVKMGETSLELCSG 671

Query: 186 PHVRSTGQVKKF 197
            HVR TG +  F
Sbjct: 672 THVRRTGDIGCF 683


>gi|240143890|ref|ZP_04742491.1| GTP diphosphokinase [Roseburia intestinalis L1-82]
 gi|257204082|gb|EEV02367.1| GTP diphosphokinase [Roseburia intestinalis L1-82]
          Length = 774

 Score = 39.7 bits (91), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 2/68 (2%)

Query: 3   SDIKLTF-PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IE 60
           SD    F P G +KN P  +T  D A SI  ++  K +   +NGK+  +   ++ G  +E
Sbjct: 429 SDTVFCFTPTGDVKNLPTGSTPIDFAYSIHSAVGNKMIGAKVNGKLVPIDYIIQNGDRVE 488

Query: 61  IITPEDPR 68
           +IT ++ +
Sbjct: 489 VITSQNSK 496


>gi|292491239|ref|YP_003526678.1| alanyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
 gi|291579834|gb|ADE14291.1| alanyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
          Length = 873

 Score = 39.7 bits (91), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 34/140 (24%), Positives = 60/140 (42%), Gaps = 11/140 (7%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFSSDELAQIEKKM 126
           R+   + HS  H++  +++ +  E     G ++  D   +DF   +    ++L QIE+ +
Sbjct: 550 RAPTRLNHSATHLLHASLRQVLGEHVAQKGSLVTADRLRFDFSHFEALEPEQLRQIERLV 609

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRG 185
              I  D P   Q +  ++A +          V  L      E V + R G +  +LC G
Sbjct: 610 NAQIRADLPVETQIMPLQEALD--------AGVVALFGEKYGEQVRVLRMGNFSVELCGG 661

Query: 186 PHVRSTGQVKKFFKLMKVAG 205
            HV  TG +   FK++   G
Sbjct: 662 THVDRTGNI-GLFKIINETG 680


>gi|323341643|ref|ZP_08081876.1| alanine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
 gi|322464068|gb|EFY09261.1| alanine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
          Length = 869

 Score = 39.7 bits (91), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 38/171 (22%), Positives = 73/171 (42%), Gaps = 20/171 (11%)

Query: 66  DPRSLAVIR--HSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY-YDFDKEQPFSSDELAQI 122
           D +   +IR  HSC H++  A++S+  +     G  ++D ++ +DF   +  + ++L ++
Sbjct: 549 DAKRRILIRKNHSCVHLLHSALKSVVGDHVSQAGSYVDDNYFRFDFSHFEKVTDEQLEKV 608

Query: 123 EKKMQEIIARDSPF--LKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW- 179
           E  + + IA   P   +++ L   KA        E Y             V +   G+  
Sbjct: 609 ELMINQWIAESLPITVVEKPLEEAKAMGAMALFSENY----------GSVVRVVTMGDAS 658

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQE 230
            +LC G H   TG++  F    K+      G   R +L +    A+ + +E
Sbjct: 659 MELCGGTHAHGTGEIGVF----KLVSEESVGSGVRRILGKTSFGAYTSYKE 705


>gi|268680286|ref|YP_003304717.1| alanyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
 gi|268618317|gb|ACZ12682.1| alanyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
          Length = 846

 Score = 39.7 bits (91), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 31/127 (24%), Positives = 55/127 (43%), Gaps = 8/127 (6%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++  A+++I  +     G ++E +   +DF   +  S +EL+ IE  +  IIA  
Sbjct: 549 HSATHLLHSALRTILGDHVAQAGSLVEKERLRFDFSHPKALSHEELSNIEAFVNRIIASG 608

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQ 193
                + ++ E      E+KK        E   ++  V  +      +LC G HV +   
Sbjct: 609 VAGETKLMNIE------EAKKSGAMALFGEKYGSEVRVVSFGDAS-IELCGGTHVENVAN 661

Query: 194 VKKFFKL 200
           +  FF L
Sbjct: 662 IGSFFIL 668


>gi|329938948|ref|ZP_08288322.1| alanyl-tRNA synthetase [Streptomyces griseoaurantiacus M045]
 gi|329301833|gb|EGG45726.1| alanyl-tRNA synthetase [Streptomyces griseoaurantiacus M045]
          Length = 890

 Score = 39.7 bits (91), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 34/133 (25%), Positives = 59/133 (44%), Gaps = 11/133 (8%)

Query: 65  EDPRSLAVIR-HSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSDELAQI 122
           +D R  A+ R HS  H+  +A++          G   + G F +DF       +  +  +
Sbjct: 562 DDRRRKAIARAHSATHLTHQALRDALGPTAAQAGSENQPGRFRFDFGSPAAVPTAVMTDV 621

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF-D 181
           E+K+ E++ARD       +       + E+KK+    E  E     E V +   G++  +
Sbjct: 622 EQKINEVLARDLDVRADVMG------IDEAKKQGAIAEFGEKY--GERVRVVTIGDFSKE 673

Query: 182 LCRGPHVRSTGQV 194
           LC G HV +T Q+
Sbjct: 674 LCGGTHVHNTAQL 686


>gi|134282822|ref|ZP_01769525.1| alanyl-tRNA synthetase [Burkholderia pseudomallei 305]
 gi|134245908|gb|EBA45999.1| alanyl-tRNA synthetase [Burkholderia pseudomallei 305]
          Length = 874

 Score = 39.7 bits (91), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 32/137 (23%), Positives = 64/137 (46%), Gaps = 20/137 (14%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H+M +A++ +        G +++ D   +DF    P + DE+ ++E  + E +  +
Sbjct: 564 HSATHLMHKALRDVLGSHVQQKGSLVDADKTRFDFAHNAPLTDDEIRRVEAIVNEQVLAN 623

Query: 134 SPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           +P + + + ++ A +     LF  +K   +V +L+   ++E            LC G HV
Sbjct: 624 APGIVRVMPYDDAVKGGAMALF-GEKYGDEVRVLDLGFSRE------------LCGGTHV 670

Query: 189 RSTGQVKKFFKLMKVAG 205
             TG +   FK++   G
Sbjct: 671 HRTGDI-GLFKIVAEGG 686


>gi|332830463|gb|EGK03091.1| hypothetical protein HMPREF9455_01341 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 574

 Score = 39.7 bits (91), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 43/184 (23%), Positives = 72/184 (39%), Gaps = 3/184 (1%)

Query: 13  SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLS-DPVREGSIEIITPEDPRSLA 71
           S KNFPV  +  D+ +  S       V   +N K   L        ++  +   +P  + 
Sbjct: 32  SYKNFPVGTSLIDILKGFSLKTEFPVVNARVNNKTEPLDYQAYHNKTVTFVELTEPSGMR 91

Query: 72  VIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQIEKKMQEII 130
               S   ++A+AV  I+PE Q+ I   I  G++    +         +  I+ K+QE I
Sbjct: 92  TYVRSLCFLLAKAVSEIFPEGQLYIEHPISLGYFCRIINISSVIDQAAIESIKAKIQEYI 151

Query: 131 ARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRS 190
             D  F        +  ++F  +    K  +LE+   +     YR G+  D   G  V S
Sbjct: 152 DADMRFEGVEEETVQVVKMFRERGFEDKAILLET-SGEMYSKYYRLGDSVDYFYGCLVPS 210

Query: 191 TGQV 194
            G +
Sbjct: 211 AGYI 214


>gi|291535022|emb|CBL08134.1| (p)ppGpp synthetase, RelA/SpoT family [Roseburia intestinalis
           M50/1]
          Length = 770

 Score = 39.7 bits (91), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 2/68 (2%)

Query: 3   SDIKLTF-PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IE 60
           SD    F P G +KN P  +T  D A SI  ++  K +   +NGK+  +   ++ G  +E
Sbjct: 425 SDTVFCFTPTGDVKNLPTGSTPIDFAYSIHSAVGNKMIGAKVNGKLVPIDYIIQNGDRVE 484

Query: 61  IITPEDPR 68
           +IT ++ +
Sbjct: 485 VITSQNSK 492


>gi|326317055|ref|YP_004234727.1| alanyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC 19860]
 gi|323373891|gb|ADX46160.1| alanyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC 19860]
          Length = 876

 Score = 39.7 bits (91), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 65/143 (45%), Gaps = 18/143 (12%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKM 126
           R+  +  HS  HIM +A++ +    VQ     +  +   +DF    P +  ++ +IE+++
Sbjct: 559 RAATMRNHSVTHIMHKALREVLGSHVQQKGSLVNAERTRFDFAHNAPVTDAQIREIERRV 618

Query: 127 QEIIARDSPFLKQYLSHEKARE----LFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
            E I  ++P   + +  E A++    +   +K    V +L+   ++E            L
Sbjct: 619 NEEILANTPTGARVMDIESAQKTGAMMLFGEKYGETVRVLDIGTSRE------------L 666

Query: 183 CRGPHVRSTGQVKKFFKLMKVAG 205
           C G HV  TG +   FK++  +G
Sbjct: 667 CGGTHVARTGDI-GLFKVVGESG 688


>gi|34540951|ref|NP_905430.1| alanyl-tRNA synthetase [Porphyromonas gingivalis W83]
 gi|41018164|sp|Q7MV54|SYA_PORGI RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|34397266|gb|AAQ66329.1| alanyl-tRNA synthetase [Porphyromonas gingivalis W83]
          Length = 876

 Score = 39.7 bits (91), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 31/134 (23%), Positives = 58/134 (43%), Gaps = 8/134 (5%)

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIE 123
           +D R  A   H+  H++ EA++ +        G  +  +   +DF      S +E+ ++E
Sbjct: 554 QDKRRQAEANHTATHLLHEALREVLGTHVEQKGSFVSPEVLRFDFSHFGKMSPEEIRKVE 613

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           + + E I  D          E+ R++  ++ +A     L      E V + + G   +LC
Sbjct: 614 ELVSERIRAD-------FQREEFRDVPIAEAQAMGAMALFGEKYGEEVRVLKYGSSVELC 666

Query: 184 RGPHVRSTGQVKKF 197
            G H+ STG +  F
Sbjct: 667 GGTHIPSTGMIGAF 680


>gi|53719621|ref|YP_108607.1| alanyl-tRNA synthetase [Burkholderia pseudomallei K96243]
 gi|76812235|ref|YP_333216.1| alanyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
 gi|121601160|ref|YP_992755.1| alanyl-tRNA synthetase [Burkholderia mallei SAVP1]
 gi|124386422|ref|YP_001026453.1| alanyl-tRNA synthetase [Burkholderia mallei NCTC 10229]
 gi|126449388|ref|YP_001080272.1| alanyl-tRNA synthetase [Burkholderia mallei NCTC 10247]
 gi|126451905|ref|YP_001065931.1| alanyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|167001586|ref|ZP_02267381.1| alanine--tRNA ligase [Burkholderia mallei PRL-20]
 gi|167738941|ref|ZP_02411715.1| alanyl-tRNA synthetase [Burkholderia pseudomallei 14]
 gi|167816161|ref|ZP_02447841.1| alanyl-tRNA synthetase [Burkholderia pseudomallei 91]
 gi|167824533|ref|ZP_02456004.1| alanyl-tRNA synthetase [Burkholderia pseudomallei 9]
 gi|167846068|ref|ZP_02471576.1| alanyl-tRNA synthetase [Burkholderia pseudomallei B7210]
 gi|167894639|ref|ZP_02482041.1| alanyl-tRNA synthetase [Burkholderia pseudomallei 7894]
 gi|167903047|ref|ZP_02490252.1| alanyl-tRNA synthetase [Burkholderia pseudomallei NCTC 13177]
 gi|167911280|ref|ZP_02498371.1| alanyl-tRNA synthetase [Burkholderia pseudomallei 112]
 gi|167919300|ref|ZP_02506391.1| alanyl-tRNA synthetase [Burkholderia pseudomallei BCC215]
 gi|217423601|ref|ZP_03455102.1| alanine--tRNA ligase [Burkholderia pseudomallei 576]
 gi|226192959|ref|ZP_03788571.1| alanine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
 gi|242315165|ref|ZP_04814181.1| alanine--tRNA ligase [Burkholderia pseudomallei 1106b]
 gi|254180068|ref|ZP_04886667.1| alanyl-tRNA synthetase [Burkholderia pseudomallei 1655]
 gi|254188523|ref|ZP_04895034.1| alanyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
 gi|254198350|ref|ZP_04904772.1| alanyl-tRNA synthetase [Burkholderia pseudomallei S13]
 gi|254261778|ref|ZP_04952832.1| alanine--tRNA ligase [Burkholderia pseudomallei 1710a]
 gi|254297905|ref|ZP_04965358.1| alanyl-tRNA synthetase [Burkholderia pseudomallei 406e]
 gi|254358720|ref|ZP_04974993.1| alanyl-tRNA synthetase [Burkholderia mallei 2002721280]
 gi|59798504|sp|Q63TF9|SYA_BURPS RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|123599400|sp|Q3JT87|SYA_BURP1 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|205830001|sp|A3MJ36|SYA_BURM7 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|205830002|sp|A2S3D4|SYA_BURM9 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|205830003|sp|A1V3F2|SYA_BURMS RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|205830004|sp|A3NUB0|SYA_BURP0 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|52210035|emb|CAH36008.1| alanyl-tRNA synthetase [Burkholderia pseudomallei K96243]
 gi|76581688|gb|ABA51163.1| alanyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
 gi|121229970|gb|ABM52488.1| alanyl-tRNA synthetase [Burkholderia mallei SAVP1]
 gi|124294442|gb|ABN03711.1| alanine--tRNA ligase [Burkholderia mallei NCTC 10229]
 gi|126225547|gb|ABN89087.1| alanyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|126242258|gb|ABO05351.1| alanine--tRNA ligase [Burkholderia mallei NCTC 10247]
 gi|148027847|gb|EDK85868.1| alanyl-tRNA synthetase [Burkholderia mallei 2002721280]
 gi|157807006|gb|EDO84176.1| alanyl-tRNA synthetase [Burkholderia pseudomallei 406e]
 gi|157936202|gb|EDO91872.1| alanyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
 gi|169655091|gb|EDS87784.1| alanyl-tRNA synthetase [Burkholderia pseudomallei S13]
 gi|184210608|gb|EDU07651.1| alanyl-tRNA synthetase [Burkholderia pseudomallei 1655]
 gi|217393459|gb|EEC33480.1| alanine--tRNA ligase [Burkholderia pseudomallei 576]
 gi|225935049|gb|EEH31024.1| alanine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
 gi|242138404|gb|EES24806.1| alanine--tRNA ligase [Burkholderia pseudomallei 1106b]
 gi|243062691|gb|EES44877.1| alanine--tRNA ligase [Burkholderia mallei PRL-20]
 gi|254220467|gb|EET09851.1| alanine--tRNA ligase [Burkholderia pseudomallei 1710a]
          Length = 874

 Score = 39.7 bits (91), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 32/137 (23%), Positives = 64/137 (46%), Gaps = 20/137 (14%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H+M +A++ +        G +++ D   +DF    P + DE+ ++E  + E +  +
Sbjct: 564 HSATHLMHKALRDVLGSHVQQKGSLVDADKTRFDFAHNAPLTDDEIRRVEAIVNEQVLAN 623

Query: 134 SPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           +P + + + ++ A +     LF  +K   +V +L+   ++E            LC G HV
Sbjct: 624 APGIVRVMPYDDAVKGGAMALF-GEKYGDEVRVLDLGFSRE------------LCGGTHV 670

Query: 189 RSTGQVKKFFKLMKVAG 205
             TG +   FK++   G
Sbjct: 671 HRTGDI-GLFKIVAEGG 686


>gi|304391435|ref|ZP_07373377.1| alanyl-tRNA synthetase [Ahrensia sp. R2A130]
 gi|303295664|gb|EFL90022.1| alanyl-tRNA synthetase [Ahrensia sp. R2A130]
          Length = 884

 Score = 39.7 bits (91), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 31/130 (23%), Positives = 60/130 (46%), Gaps = 17/130 (13%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++ EA++    +     G ++  +   +DF   +P  ++E+ +IE    E + ++
Sbjct: 564 HSATHLVHEALRETLGDHVSQKGSLVAPERLRFDFSHSKPVETEEMRRIEAMANEYVLQN 623

Query: 134 SPFLKQYLSHEKARELFESKK--EAYKVEILESIPAKENVTLYRQGE------W-FDLCR 184
           S      ++ + A EL    +  E Y  E+         V++ + GE      W  +LC 
Sbjct: 624 SQVSTTLMAVDDAIELGAQAQFGEKYGDEV-------RVVSMGKVGEGNEAKAWSLELCG 676

Query: 185 GPHVRSTGQV 194
           G HV++TG +
Sbjct: 677 GTHVKNTGDI 686


>gi|167719939|ref|ZP_02403175.1| alanyl-tRNA synthetase [Burkholderia pseudomallei DM98]
          Length = 874

 Score = 39.7 bits (91), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 32/137 (23%), Positives = 64/137 (46%), Gaps = 20/137 (14%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H+M +A++ +        G +++ D   +DF    P + DE+ ++E  + E +  +
Sbjct: 564 HSATHLMHKALRDVLGSHVQQKGSLVDADKTRFDFAHNAPLTDDEIRRVEAIVNEQVLAN 623

Query: 134 SPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           +P + + + ++ A +     LF  +K   +V +L+   ++E            LC G HV
Sbjct: 624 APGIVRVMPYDDAVKGGAMALF-GEKYGDEVRVLDLGFSRE------------LCGGTHV 670

Query: 189 RSTGQVKKFFKLMKVAG 205
             TG +   FK++   G
Sbjct: 671 HRTGDI-GLFKIVAEGG 686


>gi|161525078|ref|YP_001580090.1| alanyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|189350179|ref|YP_001945807.1| alanyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|205830000|sp|A9AC16|SYA_BURM1 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|160342507|gb|ABX15593.1| alanyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|189334201|dbj|BAG43271.1| alanyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
          Length = 874

 Score = 39.7 bits (91), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 31/134 (23%), Positives = 65/134 (48%), Gaps = 19/134 (14%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H+M +A++ +        G +++ D   +DF    P + DE+ ++E+ + + I  +
Sbjct: 564 HSATHLMHKALREVLGSHVQQKGSLVDADKTRFDFAHNAPLTDDEIRRVEQIVNDEILAN 623

Query: 134 SPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           +P + + + +++A +     LF  +K   +V +L+   ++E            LC G HV
Sbjct: 624 APGIVRVMPYDEAVKGGAMALF-GEKYGDEVRVLDLGFSRE------------LCGGTHV 670

Query: 189 RSTGQVKKFFKLMK 202
             TG +  F  +M+
Sbjct: 671 SRTGDIGLFKIVME 684


>gi|53725058|ref|YP_102626.1| alanyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
 gi|67639261|ref|ZP_00438139.1| alanine--tRNA ligase [Burkholderia mallei GB8 horse 4]
 gi|254177470|ref|ZP_04884125.1| alanyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
 gi|254199562|ref|ZP_04905928.1| alanyl-tRNA synthetase [Burkholderia mallei FMH]
 gi|254205880|ref|ZP_04912232.1| alanyl-tRNA synthetase [Burkholderia mallei JHU]
 gi|59798500|sp|Q62KZ3|SYA_BURMA RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|52428481|gb|AAU49074.1| alanyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
 gi|147749158|gb|EDK56232.1| alanyl-tRNA synthetase [Burkholderia mallei FMH]
 gi|147753323|gb|EDK60388.1| alanyl-tRNA synthetase [Burkholderia mallei JHU]
 gi|160698509|gb|EDP88479.1| alanyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
 gi|238519796|gb|EEP83263.1| alanine--tRNA ligase [Burkholderia mallei GB8 horse 4]
          Length = 874

 Score = 39.7 bits (91), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 32/137 (23%), Positives = 64/137 (46%), Gaps = 20/137 (14%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H+M +A++ +        G +++ D   +DF    P + DE+ ++E  + E +  +
Sbjct: 564 HSATHLMHKALRDVLGSHVQQKGSLVDADKTRFDFAHNAPLTDDEIRRVEAIVNEQVLAN 623

Query: 134 SPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           +P + + + ++ A +     LF  +K   +V +L+   ++E            LC G HV
Sbjct: 624 APGIVRVMPYDDAVKGGAMALF-GEKYGDEVRVLDLGFSRE------------LCGGTHV 670

Query: 189 RSTGQVKKFFKLMKVAG 205
             TG +   FK++   G
Sbjct: 671 HRTGDI-GLFKIVAEGG 686


>gi|74316571|ref|YP_314311.1| alanyl-tRNA synthetase [Thiobacillus denitrificans ATCC 25259]
 gi|74056066|gb|AAZ96506.1| alanyl-tRNA synthetase, class IIc [Thiobacillus denitrificans ATCC
           25259]
          Length = 886

 Score = 39.7 bits (91), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 31/146 (21%), Positives = 69/146 (47%), Gaps = 18/146 (12%)

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIE 123
           E  R+  +  HS  H+M +A++ +  E     G +++ +   +DF +  P ++ ++ ++E
Sbjct: 565 ETARARTMRNHSVTHLMHKALREVLGEHVQQKGSLVDSEKTRFDFVQPSPMTAAQIREVE 624

Query: 124 KKMQEIIARDSPFLKQYLSHEKARE----LFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            ++   I  ++P   + +  E A++    +   +K   +V +L+   ++E          
Sbjct: 625 ARVNAEILVNTPTQARVMGIEDAQKTGAMMLFGEKYGDEVRVLDIGSSRE---------- 674

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAG 205
             LC G HV  TG +   FK++  +G
Sbjct: 675 --LCGGTHVARTGDI-GLFKIVSESG 697


>gi|288940831|ref|YP_003443071.1| alanyl-tRNA synthetase [Allochromatium vinosum DSM 180]
 gi|288896203|gb|ADC62039.1| alanyl-tRNA synthetase [Allochromatium vinosum DSM 180]
          Length = 867

 Score = 39.7 bits (91), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 31/131 (23%), Positives = 57/131 (43%), Gaps = 10/131 (7%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D R    + HS  H++  A++ +  P VQ     +  +   +DF   +P S ++L  IE+
Sbjct: 546 DRRRATALNHSATHLLHAALREVLGPHVQQKGSLVGPERLRFDFSHFEPVSREQLLTIER 605

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLC 183
            +   +  +     + +S E A+        A     L      + V + R GE+  +LC
Sbjct: 606 MVNREVRANHLVETRIMSLEDAK--------ASGAMALFGEKYADQVRVLRMGEFSTELC 657

Query: 184 RGPHVRSTGQV 194
            G HV++ G +
Sbjct: 658 GGTHVKAVGDI 668


>gi|205830263|sp|A7HWA5|SYA_PARL1 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
          Length = 892

 Score = 39.7 bits (91), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 50/215 (23%), Positives = 94/215 (43%), Gaps = 28/215 (13%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFSSD 117
           +E+   +  R      HS  H++ EA++ +  +     G ++  +   +DF   +P + +
Sbjct: 549 VEMKVDKSLRDATRANHSATHLLHEALRRVLGDHVTQKGSMVGPERLRFDFSHPKPMTPE 608

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKA-----RELFESKKEAYKVEILESIPAKENVT 172
           E++++E  +  +I +++    + ++ E A       LF  +K   +V +L      EN  
Sbjct: 609 EISEVETIVNRVIRQNAEVTTRLMTPEDAIAAGALALF-GEKYGEEVRVLAMGLDDENP- 666

Query: 173 LYRQGEW-FDLCRGPHVRSTGQVKKFFKLMK---VAGAYWR-----GDSNRPML---SRI 220
               G +  +LC G HVR  G +   FK++    VA    R     G+  R  L    RI
Sbjct: 667 ---NGTYSVELCGGTHVRRVGDI-AIFKIVSESAVASGIRRIEALTGEGARAYLVAQDRI 722

Query: 221 YGTAWN----TQQELTQYLYFLEESEKRDHRKLAR 251
              A +    + ++L   +  L E  KR  R+LA+
Sbjct: 723 AKEAASALRISTEDLPARVVSLMEERKRLERELAQ 757


>gi|223044141|ref|ZP_03614180.1| alanyl-tRNA synthetase [Staphylococcus capitis SK14]
 gi|222442535|gb|EEE48641.1| alanyl-tRNA synthetase [Staphylococcus capitis SK14]
          Length = 876

 Score = 39.7 bits (91), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 34/150 (22%), Positives = 67/150 (44%), Gaps = 18/150 (12%)

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELA 120
           +  ED R++    HS  H++  A++ +  +     G ++E D   +DF    P + +EL 
Sbjct: 553 VNKEDRRAIQK-NHSATHLLHAALKEVLGDHVNQAGSLVEADRLRFDFSHFGPMTQEELD 611

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKAREL----FESKKEAYKVEILESIPAKENVTLYRQ 176
           Q+E+++ E I R      Q +  ++A+ +       +K    V ++   P          
Sbjct: 612 QVERRVNEEIWRGIDVRIQEMGIDEAKSMGAMALFGEKYGDIVRVVNMAPFS-------- 663

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVAGA 206
               +LC G HV +T ++   FK++  +G 
Sbjct: 664 ---IELCGGIHVSNTAEI-GLFKIVSESGT 689


>gi|108808831|ref|YP_652747.1| alanyl-tRNA synthetase [Yersinia pestis Antiqua]
 gi|122382877|sp|Q1C420|SYA_YERPA RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|108780744|gb|ABG14802.1| alanyl-tRNA synthetase [Yersinia pestis Antiqua]
          Length = 738

 Score = 39.7 bits (91), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 33/160 (20%), Positives = 70/160 (43%), Gaps = 21/160 (13%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY-YDFDKEQPFSS 116
           S+E +     R+   + HS  H++  A++++  E     G ++ D +  +DF   +    
Sbjct: 547 SVEALVDVVRRNRIRLNHSATHLLHAALRNVLGEHVAQKGSLVNDKYLRFDFSHFEAMKP 606

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENV 171
           +++  +E  + E I R+ P   + +  + A+E     LF  K +             + V
Sbjct: 607 EQIRLVEDLVNEQIRRNMPVQTEVMELDAAKEKGAMALFGEKYD-------------DQV 653

Query: 172 TLYRQGEW-FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRG 210
            +   G++  +LC G H   TG +   F+++  +G+   G
Sbjct: 654 RVLTMGDFSTELCGGTHASRTGDI-GLFRILTESGSNLPG 692


>gi|83719349|ref|YP_443176.1| alanyl-tRNA synthetase [Burkholderia thailandensis E264]
 gi|167620352|ref|ZP_02388983.1| alanyl-tRNA synthetase [Burkholderia thailandensis Bt4]
 gi|257139409|ref|ZP_05587671.1| alanyl-tRNA synthetase [Burkholderia thailandensis E264]
 gi|123536505|sp|Q2SV73|SYA_BURTA RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|83653174|gb|ABC37237.1| alanyl-tRNA synthetase [Burkholderia thailandensis E264]
          Length = 874

 Score = 39.7 bits (91), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 32/137 (23%), Positives = 64/137 (46%), Gaps = 20/137 (14%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H+M +A++ +        G +++ D   +DF    P + DE+ ++E  + E +  +
Sbjct: 564 HSATHLMHKALRDVLGSHVQQKGSLVDADKTRFDFAHNAPLTDDEIRRVEAIVNEQVLAN 623

Query: 134 SPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           +P + + + ++ A +     LF  +K   +V +L+   ++E            LC G HV
Sbjct: 624 APGIVRVMPYDDAVKGGAMALF-GEKYGDEVRVLDLGFSRE------------LCGGTHV 670

Query: 189 RSTGQVKKFFKLMKVAG 205
             TG +   FK++   G
Sbjct: 671 HRTGDI-GLFKIVAEGG 686


>gi|291402378|ref|XP_002717441.1| PREDICTED: glutamyl-prolyl tRNA synthetase [Oryctolagus cuniculus]
          Length = 1460

 Score = 39.3 bits (90), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 66/307 (21%), Positives = 118/307 (38%), Gaps = 55/307 (17%)

Query: 334  FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH- 392
             A++P +       +   ++S+R+LP+RL ++ +V R E        +R R F   + H 
Sbjct: 1064 IAIRPTSETVMYPAYAKWVQSHRDLPIRLNQWCNVVRWEFKHP-QPFLRTREFLWQEGHS 1122

Query: 393  VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
             F T E+   E L+I +L   +Y++     ++    T  EK  G D             +
Sbjct: 1123 AFATFEEAAEEVLQILDLYARVYEELLAIPVVKGRKTEKEKFAGGD---------YTTTI 1173

Query: 453  DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
            +   ++S   I  G     G  +    E + +D                           
Sbjct: 1174 EAFISASGRAIQGGTSHHLGQNFSKMCEIVFEDP-------------------------K 1208

Query: 513  SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIV--TTITSSAVE 566
            +  EK      ++  +G   R IG+MI     N+ L L P    +Q +V    IT++  E
Sbjct: 1209 TPGEK---QFAYQCSWGLTTRTIGVMIMVHGDNMGLVLPPRVASVQVVVIPCGITNALSE 1265

Query: 567  YAQE--IANL------LKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASE- 616
              +E  IA        L S  + +  D R N +  +K     +K +PI +  G ++    
Sbjct: 1266 EDKEALIAKCNDYCRRLLSVSIRVRADLRDNYSPGWKFNHWELKGVPIRLEVGPRDMKNC 1325

Query: 617  RSIGIRR 623
            + + +RR
Sbjct: 1326 QFVAVRR 1332


>gi|188995245|ref|YP_001929497.1| alanyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277]
 gi|188594925|dbj|BAG33900.1| alanyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277]
          Length = 876

 Score = 39.3 bits (90), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 31/134 (23%), Positives = 58/134 (43%), Gaps = 8/134 (5%)

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIE 123
           +D R  A   H+  H++ EA++ +        G  +  +   +DF      S +E+ ++E
Sbjct: 554 QDKRRQAEANHTATHLLHEALREVLGTHVEQKGSFVSPEVLRFDFSHFGKMSPEEIRKVE 613

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           + + E I  D          E+ R++  ++ +A     L      E V + + G   +LC
Sbjct: 614 ELVSERIRAD-------FQREEFRDVPIAEAQAMGAMALFGEKYGEEVRVLKYGSSVELC 666

Query: 184 RGPHVRSTGQVKKF 197
            G H+ STG +  F
Sbjct: 667 GGTHIPSTGMIGTF 680


>gi|319638074|ref|ZP_07992838.1| alanyl-tRNA synthetase [Neisseria mucosa C102]
 gi|317400719|gb|EFV81376.1| alanyl-tRNA synthetase [Neisseria mucosa C102]
          Length = 964

 Score = 39.3 bits (90), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 37/178 (20%), Positives = 77/178 (43%), Gaps = 18/178 (10%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSS 116
           S+     ++ R+  +  HS  H+M +A++ +  E V+     +  +   +D    Q  ++
Sbjct: 635 SVTAKVDDEIRNANMRNHSATHLMHKALRDVLGEHVEQKGSLVTAESTRFDISHPQAVTA 694

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARE----LFESKKEAYKVEILESIPAKENVT 172
           +E+A++E+++ E I  +       +S E A++    +   +K   +V +L+         
Sbjct: 695 EEIAEVERRVNEAILANVAVNAAIMSMEDAQKTGAMMLFGEKYGDEVRVLQ--------- 745

Query: 173 LYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQE 230
               G   +LC G HV  TG +   FK++   G    G      ++ +    W  +QE
Sbjct: 746 --MGGFSTELCGGTHVSRTGDI-GLFKIIS-EGGIAAGVRRIEAITGLNALKWAQEQE 799


>gi|312880061|ref|ZP_07739861.1| alanyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
 gi|310783352|gb|EFQ23750.1| alanyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
          Length = 880

 Score = 39.3 bits (90), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 26/121 (21%), Positives = 60/121 (49%), Gaps = 8/121 (6%)

Query: 75  HSCAHIMAEAV-QSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           H+  H++ EA+ Q +   V+ A   +  +G  +D++   P + +++ ++E ++ E + ++
Sbjct: 566 HTTTHLLHEALTQVLGDHVRQAGSLVSPEGLRFDYNHFAPLTPEQIQEVEDRVNEQVLKN 625

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQ 193
            P   +    E A+ L    K  ++ +  E +       +  +G   +LC G HV +TG+
Sbjct: 626 LPVTTRETDLETAKAL--GAKALFEEKYGERVR-----VVSVEGYSTELCGGTHVCATGE 678

Query: 194 V 194
           +
Sbjct: 679 I 679


>gi|256426000|ref|YP_003126653.1| (p)ppGpp synthetase I, SpoT/RelA [Chitinophaga pinensis DSM 2588]
 gi|256040908|gb|ACU64452.1| (p)ppGpp synthetase I, SpoT/RelA [Chitinophaga pinensis DSM 2588]
          Length = 750

 Score = 39.3 bits (90), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 1/61 (1%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEII 62
           +I +  P G +K  PV++T  D A SI  ++  K +   +N K+  +S  +R G  +EII
Sbjct: 414 EIYVYTPKGDLKILPVNSTALDFAYSIHSAVGNKCIGAKVNYKLVPISHKLRSGDQVEII 473

Query: 63  T 63
           T
Sbjct: 474 T 474


>gi|91227829|ref|ZP_01262002.1| alanyl-tRNA synthetase [Vibrio alginolyticus 12G01]
 gi|91188339|gb|EAS74635.1| alanyl-tRNA synthetase [Vibrio alginolyticus 12G01]
          Length = 860

 Score = 39.3 bits (90), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 34/149 (22%), Positives = 65/149 (43%), Gaps = 11/149 (7%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSD 117
           +  I   + R+   + HS  H++  A++ +  E     G +++ D   +DF   +  ++ 
Sbjct: 547 VATIVDAERRAAISLNHSATHLLHAALRQVLGEHVTQKGSLVKADNLRFDFSHLEAVTAA 606

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           EL ++E+ +   I R+       +  E A+     KK A     L      + V +   G
Sbjct: 607 ELKEVERLVNAQIRRNHTIETNVMDIESAK-----KKGAMA---LFGEKYDDEVRVLSMG 658

Query: 178 EW-FDLCRGPHVRSTGQVKKFFKLMKVAG 205
           ++  +LC G H  STG +   FK+   +G
Sbjct: 659 DFSTELCGGIHASSTGDI-GLFKITSESG 686


>gi|322390790|ref|ZP_08064300.1| GTP diphosphokinase [Streptococcus parasanguinis ATCC 903]
 gi|321142460|gb|EFX37928.1| GTP diphosphokinase [Streptococcus parasanguinis ATCC 903]
          Length = 739

 Score = 39.3 bits (90), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 1/64 (1%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SI 59
           +  +I +  PDG++++ P  +   D A  I   + +KA+   +NG++  L+  +R G  +
Sbjct: 390 LAEEIYVFTPDGTVRSLPKDSGPIDFAYEIHTKVGEKAIGAKVNGRMVPLNTKLRTGDQV 449

Query: 60  EIIT 63
           EIIT
Sbjct: 450 EIIT 453


>gi|312868044|ref|ZP_07728248.1| GTP diphosphokinase [Streptococcus parasanguinis F0405]
 gi|311096448|gb|EFQ54688.1| GTP diphosphokinase [Streptococcus parasanguinis F0405]
          Length = 739

 Score = 39.3 bits (90), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 1/64 (1%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SI 59
           +  +I +  PDG++++ P  +   D A  I   + +KA+   +NG++  L+  +R G  +
Sbjct: 390 LAEEIYVFTPDGTVRSLPKDSGPIDFAYEIHTKVGEKAIGAKVNGRMVPLNTKLRTGDQV 449

Query: 60  EIIT 63
           EIIT
Sbjct: 450 EIIT 453


>gi|296877190|ref|ZP_06901230.1| GTP diphosphokinase [Streptococcus parasanguinis ATCC 15912]
 gi|296431710|gb|EFH17517.1| GTP diphosphokinase [Streptococcus parasanguinis ATCC 15912]
          Length = 739

 Score = 39.3 bits (90), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 1/64 (1%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SI 59
           +  +I +  PDG++++ P  +   D A  I   + +KA+   +NG++  L+  +R G  +
Sbjct: 390 LAEEIYVFTPDGTVRSLPKDSGPIDFAYEIHTKVGEKAIGAKVNGRMVPLNTKLRTGDQV 449

Query: 60  EIIT 63
           EIIT
Sbjct: 450 EIIT 453


>gi|293376513|ref|ZP_06622741.1| proline--tRNA ligase [Turicibacter sanguinis PC909]
 gi|292644739|gb|EFF62821.1| proline--tRNA ligase [Turicibacter sanguinis PC909]
          Length = 476

 Score = 39.3 bits (90), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 60/262 (22%), Positives = 108/262 (41%), Gaps = 37/262 (14%)

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKG-------- 450
           Q +N+  K +N   S+ +   +EK     +TRP  R  ++ LW +   +           
Sbjct: 127 QSYNDLPKKYNQWCSVVR---WEK-----TTRPFLRT-TEFLWQEGHTVHATAEEAEEET 177

Query: 451 --VLDTIKNSSQDRINTGVLLGEGA----FYGPKFEYILKDAI--GRDWQCGTIQVDFNL 502
             +L+T     ++ +   VL G+      F G +  Y ++  +  G+  Q GT     N 
Sbjct: 178 LLMLNTYAKMCEEFLAIPVLKGQKTEKEKFAGAQATYTIESLMHDGKALQSGT---SHNF 234

Query: 503 PSRF-NAFYVNSHSEKCHPVMIHRAVFGSIERFIG--IMIENFKGNL--PLWLSPIQAIV 557
            + F  AF +    +       H+  +G   R IG  IM+      L  P  ++P Q ++
Sbjct: 235 GTGFAKAFDIKYSDKNSKMQYAHQTSWGVTTRLIGAIIMVHGDSSGLVLPPRVAPTQVMI 294

Query: 558 TTITS---SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
             I +     +E A E+   L S    ++ D  ++T  +K  E+ +K IP+ +  G K+ 
Sbjct: 295 IPIAAHKEGVIEKACELQTRLASV-ARVKCDTSDKTPGWKFSEYEMKGIPVRVEIGPKDI 353

Query: 615 SERSIGIRRFGSTTTQKVSLLD 636
               + + R  +     VSL D
Sbjct: 354 ENNQVVLVRRDTREKIIVSLDD 375


>gi|171688027|ref|XP_001908954.1| hypothetical protein [Podospora anserina S mat+]
 gi|170943975|emb|CAP69627.1| unnamed protein product [Podospora anserina S mat+]
          Length = 577

 Score = 39.3 bits (90), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 34/139 (24%), Positives = 62/139 (44%), Gaps = 11/139 (7%)

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           ++   V  Q LW +SG  ++  + +F  K +D   +    + L P +     A+     K
Sbjct: 75  VSLSAVSSQSLWDKSGRLENTASELF--KFSD---RKNVGYLLAPTHEEEITALVAQTAK 129

Query: 354 SYRELPVRLAEFGSVYRNE--PSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNL 410
           + ++LP+RL +    YR+E  P    HGL+R R F   D + F  +KE        +  +
Sbjct: 130 TAKDLPLRLFQITPKYRDEFRPR---HGLLRGREFVMKDLYTFDSSKESALETYDNVRLV 186

Query: 411 IISIYKDFGFEKIMVKLST 429
              I+++     +  K S+
Sbjct: 187 YSQIFEEMKLPVLAAKASS 205


>gi|157867947|ref|XP_001682527.1| bifunctional aminoacyl-trna synthetase; prolyl-trna synthetase
           [Leishmania major strain Friedlin]
 gi|68125981|emb|CAJ04054.1| putative prolyl-tRNA synthetase [Leishmania major strain Friedlin]
          Length = 731

 Score = 39.3 bits (90), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 85/407 (20%), Positives = 154/407 (37%), Gaps = 68/407 (16%)

Query: 241 SEKRDHRKLAREMDLFHIAE-----DGSGVIF---WHRKGWKIFQTLISYMRRKIKDDYE 292
           + KR+    A  +D+   AE     D SG      W    WK  Q  +     K+    E
Sbjct: 225 AAKREENFSAWYIDVITKAEMIEYYDVSGCYIIRPWAYYVWKCVQRFLGGKIEKL--GVE 282

Query: 293 EINTPQVLDQH-LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           +   P  + +  L ++  H + +   +  V  A DT  + +  A++P +       +   
Sbjct: 283 DCYFPMFVSRSCLEREKDHIEGFAPEVAWVTRAGDTELE-QPVAVRPTSETVMYPYYAKW 341

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNL 410
           ++S+R+LPVRL  + +V R E S      +R R F   + H    K E+   E L+I   
Sbjct: 342 IRSHRDLPVRLNMWNNVIRWEFSHPTP-FIRTREFLWQEGHCAWAKAEECAKEVLEILEC 400

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
             S+Y+      ++    T  EK  G D                                
Sbjct: 401 YASVYEQLLAVPVVRGRKTEKEKFAGGD-------------------------------- 428

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG 529
               Y    E  + +A+GR  Q  T   +  N    F+  + +  + +   ++  +  +G
Sbjct: 429 ----YTTTVETFI-EAVGRGCQGATSHNLGQNFGKMFDIRFQDPENNE-QTLIPWQNSWG 482

Query: 530 SIERFIGIMI----ENFKGNLPLWLSPIQAIV--TTITSSAVEYAQE--------IANLL 575
              R IG+MI    +N    +P  ++  Q I+    IT    E A++        + + L
Sbjct: 483 LSTRVIGVMIMVHGDNRGMVMPPRVASTQVIIIPVGITKDTTEEARQELLASCWRLESEL 542

Query: 576 KSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
               +    D R N +  ++     +K +P+ +  G +E +ERS+ +
Sbjct: 543 CEGGVRARCDLRDNYSPGWRFNHWEVKGVPLRVELGPRELAERSLAV 589


>gi|226323189|ref|ZP_03798707.1| hypothetical protein COPCOM_00961 [Coprococcus comes ATCC 27758]
 gi|225208379|gb|EEG90733.1| hypothetical protein COPCOM_00961 [Coprococcus comes ATCC 27758]
          Length = 855

 Score = 39.3 bits (90), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 33/140 (23%), Positives = 66/140 (47%), Gaps = 11/140 (7%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSDELAQIEKKM 126
           R L    HS  H++ +A++++        G  ++D    +DF      + +EL ++E  +
Sbjct: 535 RVLCARNHSATHLLQKALRTVLGTHVEQSGSYVDDKRLRFDFSHFSAMTPEELQKVEDMV 594

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRG 185
            E I+R  P + + +  E+AR   ++  +A   E    I     V +   G++  + C G
Sbjct: 595 NESISRSLPVVIKNMPIEEAR---KTGAQALFGEKYGDI-----VRVVNMGDYSIEFCGG 646

Query: 186 PHVRSTGQVKKFFKLMKVAG 205
            HV +T ++   FK++  +G
Sbjct: 647 THVANTSEIGA-FKILSESG 665


>gi|167582193|ref|ZP_02375067.1| alanyl-tRNA synthetase [Burkholderia thailandensis TXDOH]
          Length = 874

 Score = 39.3 bits (90), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 32/137 (23%), Positives = 64/137 (46%), Gaps = 20/137 (14%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H+M +A++ +        G +++ D   +DF    P + DE+ ++E  + E +  +
Sbjct: 564 HSATHLMHKALRDVLGSHVQQKGSLVDADKTRFDFAHNAPLTDDEIRRVEAIVNEQVLAN 623

Query: 134 SPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           +P + + + ++ A +     LF  +K   +V +L+   ++E            LC G HV
Sbjct: 624 APGIVRVMPYDDAVKGGAMALF-GEKYGDEVRVLDLGFSRE------------LCGGTHV 670

Query: 189 RSTGQVKKFFKLMKVAG 205
             TG +   FK++   G
Sbjct: 671 HRTGDI-GLFKIVAEGG 686


>gi|49475765|ref|YP_033806.1| alanyl-tRNA synthetase [Bartonella henselae str. Houston-1]
 gi|59798532|sp|Q6G2Z4|SYA_BARHE RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|49238572|emb|CAF27813.1| Alanyl-tRNA synthetase [Bartonella henselae str. Houston-1]
          Length = 887

 Score = 39.3 bits (90), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 33/129 (25%), Positives = 57/129 (44%), Gaps = 10/129 (7%)

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIA 131
           + HS  H++ EA++ +        G ++  D   +DF   +  S +EL +IE    EI+ 
Sbjct: 562 VNHSATHLLHEALRQVLGSHVTQKGSLVSPDRLRFDFSHPKSVSLEELEKIEDLANEIVL 621

Query: 132 RDSPFLKQYLS-----HEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRG 185
           ++S    + +       E A  LF  +K   +V ++      E   L  +  W  +LC G
Sbjct: 622 QNSEVTTRLMLVDDAISEGAMALF-GEKYGDEVRVVSMGNRLEKGKL--KSRWSIELCGG 678

Query: 186 PHVRSTGQV 194
            HV  TG +
Sbjct: 679 THVERTGDI 687


>gi|311265228|ref|XP_003130565.1| PREDICTED: LOW QUALITY PROTEIN: bifunctional aminoacyl-tRNA
            synthetase [Sus scrofa]
          Length = 1432

 Score = 39.3 bits (90), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 2/106 (1%)

Query: 334  FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH- 392
             A++P +       +   ++S+R+LP+RL ++ +V R E        +R R F   + H 
Sbjct: 1114 IAVRPTSETVMYPAYAKWVQSHRDLPIRLNQWCNVVRWEFKHP-QPFLRTREFLWQEGHS 1172

Query: 393  VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD 438
             F T E+   E L+I +L   +Y++     ++    T  EK  G D
Sbjct: 1173 AFATFEEAAEEVLQILDLYAQVYEELLAIPVVKGRKTEKEKFAGGD 1218


>gi|256545100|ref|ZP_05472466.1| phosphoribulokinase/uridine kinase family protein [Anaerococcus
           vaginalis ATCC 51170]
 gi|256399141|gb|EEU12752.1| phosphoribulokinase/uridine kinase family protein [Anaerococcus
           vaginalis ATCC 51170]
          Length = 542

 Score = 39.3 bits (90), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 31/146 (21%), Positives = 68/146 (46%), Gaps = 3/146 (2%)

Query: 36  KKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           K  +   +NGK+ DL+  + ++  I++I      +      + A I   A++ I+   +V
Sbjct: 30  KDYILANVNGKIVDLNYRIFQDDKIDLIKKYTHIANLSYESTIALICMLAIEKIYKNKKV 89

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            I   + +  Y   +  +    D + +I+K+M+ +I  D P +K+     +A ++F+   
Sbjct: 90  NIEYSVNNCLYLSVENFKILHKD-IEKIKKEMKNLIKEDFPIVKKTYKKTEALKIFKEND 148

Query: 155 EAYKVEILESIPAKENVTLYRQGEWF 180
           +  K  +L S+   E + +Y   + F
Sbjct: 149 DLDKYNLLNSLDLNE-INIYDVKDKF 173


>gi|42560874|ref|NP_975325.1| prolyl-tRNA synthetase [Mycoplasma mycoides subsp. mycoides SC str.
           PG1]
 gi|81829401|sp|Q6MTR9|SYP_MYCMS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|42492371|emb|CAE76967.1| proline-tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str.
           PG1]
          Length = 474

 Score = 39.3 bits (90), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 75/372 (20%), Positives = 145/372 (38%), Gaps = 60/372 (16%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAV 321
           G + +   G++I++ +  Y+  + K  + + +  P ++ + L+ ++  H + +   +  V
Sbjct: 36  GTMIFRPYGYRIWELIQKYLDEEFKKVNVDNVYFPLLIPESLFNKEKDHIEGFSPEIATV 95

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
                   +   F ++P +    +  F++ + SYR+LP+   ++ +V R E +      +
Sbjct: 96  TRVGQKKLEENLF-IRPTSEVVMMDYFSNEINSYRDLPLIYNQWCNVMRWEKTT--RPFL 152

Query: 382 RVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           R   F   + H +  +  +  N CLKI N+     K+     ++    T  EK       
Sbjct: 153 RTSEFLWQEGHTIHSSYNEAENFCLKILNIYEKFAKEILLLPVICGKKTEKEK------- 205

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAI--GRDWQCGTIQV 498
                                            F G K  Y ++  +  G+  QCGT   
Sbjct: 206 ---------------------------------FAGAKDTYTIESLMFDGQALQCGTSHF 232

Query: 499 -DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPI 553
              N    ++  + N  ++  H    +   +G   R IG +I     +    LP  +SPI
Sbjct: 233 FADNFTKVYDIKFQNKENKLEHA---YSTSWGVSTRLIGALIMTHSDDNGLVLPSKISPI 289

Query: 554 QAIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
           Q  +  I  T    +  + I + L  +   I+ D  +++  +KI E  IK IPI I  G 
Sbjct: 290 QIQIIQIKNTEQIDQVVENIKDKLSDYR--IDVDNSDKSFGFKISEAEIKGIPIRIEIGP 347

Query: 612 KEASERSIGIRR 623
           ++     I I R
Sbjct: 348 RDLENNQITISR 359


>gi|304383973|ref|ZP_07366429.1| alanine--tRNA ligase [Prevotella marshii DSM 16973]
 gi|304334865|gb|EFM01139.1| alanine--tRNA ligase [Prevotella marshii DSM 16973]
          Length = 875

 Score = 39.3 bits (90), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 32/133 (24%), Positives = 58/133 (43%), Gaps = 8/133 (6%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           + R+ +   H+  H++   ++ +  E V+     +  D   +DF   Q  + DEL Q+E+
Sbjct: 556 EKRAASAANHTATHLLDYVLKQVLGEHVEQKGSYVSADTLRFDFSHFQKVTDDELRQVER 615

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
            +  +I +D P     L   +   + E+K+        E    K  V + R G   + C 
Sbjct: 616 MVNAMIRQDIP-----LDEHRDTPIEEAKQMGAISLFGEKYGDK--VRVVRFGPSCEFCG 668

Query: 185 GPHVRSTGQVKKF 197
           G H  STG++  F
Sbjct: 669 GIHAASTGRIGMF 681


>gi|269965244|ref|ZP_06179378.1| alanyl-tRNA synthetase [Vibrio alginolyticus 40B]
 gi|269830230|gb|EEZ84457.1| alanyl-tRNA synthetase [Vibrio alginolyticus 40B]
          Length = 860

 Score = 39.3 bits (90), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 34/149 (22%), Positives = 65/149 (43%), Gaps = 11/149 (7%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSD 117
           +  I   + R+   + HS  H++  A++ +  E     G +++ D   +DF   +  ++ 
Sbjct: 547 VATIVDAERRAAISLNHSATHLLHAALRQVLGEHVTQKGSLVKADNLRFDFSHLEAVTAA 606

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           EL ++E+ +   I R+       +  E A+     KK A     L      + V +   G
Sbjct: 607 ELKEVERLVNAQIRRNHTIETNVMDIESAK-----KKGAMA---LFGEKYDDEVRVLSMG 658

Query: 178 EW-FDLCRGPHVRSTGQVKKFFKLMKVAG 205
           ++  +LC G H  STG +   FK+   +G
Sbjct: 659 DFSTELCGGIHASSTGDI-GLFKITSESG 686


>gi|225377640|ref|ZP_03754861.1| hypothetical protein ROSEINA2194_03291 [Roseburia inulinivorans DSM
           16841]
 gi|225210504|gb|EEG92858.1| hypothetical protein ROSEINA2194_03291 [Roseburia inulinivorans DSM
           16841]
          Length = 886

 Score = 39.3 bits (90), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 34/139 (24%), Positives = 62/139 (44%), Gaps = 20/139 (14%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D R      HS  H++ +A++ +    V+ A      +   +DF   Q  +++E+A++EK
Sbjct: 564 DLRGKTCKNHSATHLLQKALREVLGTHVEQAGSYQDAERTRFDFSHFQAMTAEEIAKVEK 623

Query: 125 KMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            + + IA D       ++ E+A++     LF  K               E V +   GE+
Sbjct: 624 IVNDEIAADLEVRTDVMTVEEAKKTGAMALFGEK-------------YGEKVRVVSMGEF 670

Query: 180 F-DLCRGPHVRSTGQVKKF 197
             + C G HV+ TG++  F
Sbjct: 671 SKEFCGGTHVKHTGEIAAF 689


>gi|168186831|ref|ZP_02621466.1| alanyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
 gi|169295233|gb|EDS77366.1| alanyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
          Length = 879

 Score = 39.3 bits (90), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 34/179 (18%)

Query: 43  INGKVCDLSDPVREGSIEIITPEDPRSLAVIR---------HSCAHIMAEAVQSIWPE-V 92
           I GK+    + + EG+I++   ED   L V R         HS  H++  A++ +  E V
Sbjct: 529 IGGKIVHFVEVI-EGNIKL---EDEVLLEVDRRRRENVGKNHSATHLLHAALRKVIGEHV 584

Query: 93  QVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE---- 148
             +   + ED   +DF   +  + +EL ++E  +   I      + + +S E+AR     
Sbjct: 585 HQSGSYVDEDKLRFDFTHFESLTDEELKEVEDLVNNTIENVYDVVTKEMSIEEARNSGAM 644

Query: 149 -LFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKFFKLMKVAG 205
            LF+ K               + V + + GE+  +LC G H+ + G++   FK++  +G
Sbjct: 645 ALFDEK-------------YGDRVRVVKMGEFSTELCGGTHISNVGKI-GLFKIVSESG 689


>gi|134298636|ref|YP_001112132.1| alanyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
 gi|205830077|sp|A4J2K4|SYA_DESRM RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|134051336|gb|ABO49307.1| alanyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
          Length = 878

 Score = 39.3 bits (90), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 34/145 (23%), Positives = 65/145 (44%), Gaps = 10/145 (6%)

Query: 55  REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQP 113
           R  S++ I  +  R      HS  H++ +A++ +  +     G ++E D   +DF     
Sbjct: 545 RHDSVKAIVDQPRRQDTARNHSATHLLHKALKEVLGDHVNQAGSLVEPDRLRFDFTHYAA 604

Query: 114 FSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTL 173
            +S+EL +IE+ + E +  +        S  KA+E+  +     K          + V +
Sbjct: 605 VTSEELRRIEEIVNEAVLSNLSIEVFETSLSKAKEMGAAALFGEKY--------GKQVRV 656

Query: 174 YRQGEW-FDLCRGPHVRSTGQVKKF 197
            + G++  +LC G H+ ST +V  F
Sbjct: 657 VKMGDFSMELCGGTHLTSTAEVGLF 681


>gi|297195516|ref|ZP_06912914.1| alanyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC 25486]
 gi|297152826|gb|EDY66040.2| alanyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC 25486]
          Length = 854

 Score = 39.3 bits (90), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 38/154 (24%), Positives = 64/154 (41%), Gaps = 14/154 (9%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H+  +A++          G     G F +DF          L  +E+K+ E++AR+
Sbjct: 573 HSATHLTHQALRDALGPTAAQAGSENSPGRFRFDFGSPNAVPGTVLTDVEQKINEVLARE 632

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF-DLCRGPHVRSTG 192
                    H +   + E+KK+    E  E     E V +   G++  +LC G HV +T 
Sbjct: 633 LDV------HAEVMSIDEAKKQGAIAEFGEKY--GERVRVVTIGDFSKELCGGTHVHNTA 684

Query: 193 QVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWN 226
           Q      L+K+ G    G   R + + +   A+N
Sbjct: 685 Q----LGLVKLLGESSIGSGVRRVEALVGVDAYN 714


>gi|254527157|ref|ZP_05139209.1| alanyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
 gi|221538581|gb|EEE41034.1| alanyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
          Length = 886

 Score = 39.3 bits (90), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 30/144 (20%), Positives = 65/144 (45%), Gaps = 14/144 (9%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSS 116
           +I+ I     R+ A   H+  H++  A++ +  +     G ++  +   +DF+  +P S 
Sbjct: 547 TIKTIVNPAKRARASANHTATHLLQSALKEVVNKNVSQKGSLVAFNKLRFDFNASKPVSE 606

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARE--LFESKKEAYKVEI-LESIPAKENVTL 173
           D++ ++E  +   I ++ P + + +   +A E        E Y  E+ +  +P       
Sbjct: 607 DQIRKVESLVNSWIIQNHPLVIKNMPKREALEKGALAMFGEKYGDEVRVVDVP------- 659

Query: 174 YRQGEWFDLCRGPHVRSTGQVKKF 197
              G   +LC G HV++T ++  F
Sbjct: 660 ---GVSMELCGGTHVKNTSELGCF 680


>gi|189465580|ref|ZP_03014365.1| hypothetical protein BACINT_01938 [Bacteroides intestinalis DSM
           17393]
 gi|189437854|gb|EDV06839.1| hypothetical protein BACINT_01938 [Bacteroides intestinalis DSM
           17393]
          Length = 157

 Score = 39.3 bits (90), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 26/126 (20%), Positives = 63/126 (50%), Gaps = 13/126 (10%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDS 134
           H+C HI+   + +++   +     I       D+  E   + +++ ++E+ + ++IA+  
Sbjct: 19  HTCEHIVNRTMMNLFGCGRSVSAHIERKKSKLDYSLETAPTEEDVKRLEEAVNDVIAQGL 78

Query: 135 PFLKQYLSHEKARELFESKKEAYKVEILESIP--AKENVTLYRQGEWFD-LCRGPHVRST 191
               ++++ E+A+  F+ K+          +P  A E V + + G++ + LC G HV++T
Sbjct: 79  DVTTEFITQEEAQGRFDLKR----------LPEDASETVRIVKVGDYDECLCLGTHVKNT 128

Query: 192 GQVKKF 197
            ++  F
Sbjct: 129 SEIGIF 134


>gi|332885412|gb|EGK05661.1| hypothetical protein HMPREF9456_02463 [Dysgonomonas mossii DSM
           22836]
          Length = 555

 Score = 39.3 bits (90), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 42/191 (21%), Positives = 77/191 (40%), Gaps = 10/191 (5%)

Query: 12  GSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-----REGSIEIITPED 66
            + ++FP    GS++ + I      K+ +  +N KV + ++P+        ++  +    
Sbjct: 13  NTYQDFP---AGSNLIK-ILEGFDVKSQSTIVNAKVNNKTEPLDYCVYHNKTVTFVDLTS 68

Query: 67  PRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKM 126
           P  +     S   ++A+AV   +PE Q+ I   I  G++             +  I+ KM
Sbjct: 69  PSGMRAYVRSLCFLLAKAVSETFPEAQLYIEHPISLGYFCRISDRATIDEKAIEAIKTKM 128

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGP 186
           Q+ I  D  F       +K  ++F ++    K  +LES   +     YR     D   G 
Sbjct: 129 QQYIEADMRFEAVEEETDKVVKMFRNRGFEDKALLLES-SGELYSKYYRLNGSVDYFYGC 187

Query: 187 HVRSTGQVKKF 197
            V ST  +  F
Sbjct: 188 LVPSTKYIHLF 198


>gi|154150357|ref|YP_001403975.1| glycyl-tRNA synthetase [Candidatus Methanoregula boonei 6A8]
 gi|153998909|gb|ABS55332.1| glycyl-tRNA synthetase [Methanoregula boonei 6A8]
          Length = 573

 Score = 39.3 bits (90), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 2/64 (3%)

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRE-LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
           R   L+P    G    F   L+ YR+ LP    + G  YRNE S    G++R+R FTQ +
Sbjct: 156 RVGYLRPETAQGMFVDFARLLRFYRDKLPFGAVQIGKSYRNEIS-PRQGMIRLREFTQAE 214

Query: 391 AHVF 394
           A +F
Sbjct: 215 AEIF 218


>gi|332305691|ref|YP_004433542.1| alanyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332173020|gb|AEE22274.1| alanyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 865

 Score = 39.3 bits (90), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 31/140 (22%), Positives = 64/140 (45%), Gaps = 21/140 (15%)

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIA 131
           + HS  H+M  A++S+  E     G +++ +   +DF   +  + +++  +E  + E I 
Sbjct: 552 LNHSATHLMHAALKSVLGEHVNQKGSLVQPERLRFDFSHYEAMTKEQVLAVETMVNEQIL 611

Query: 132 RDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRG 185
            +     + +  E+A+E     LF  K +             ++V +   G++  +LC G
Sbjct: 612 ANHALQTKLMGLEQAKEAGAMALFGEKYD-------------DDVRVVSMGDFSMELCGG 658

Query: 186 PHVRSTGQVKKFFKLMKVAG 205
            HV  TG +   FK++  +G
Sbjct: 659 THVARTGDI-GLFKIISESG 677


>gi|329120502|ref|ZP_08249167.1| guanosine 3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Neisseria
           bacilliformis ATCC BAA-1200]
 gi|327461960|gb|EGF08290.1| guanosine 3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Neisseria
           bacilliformis ATCC BAA-1200]
          Length = 718

 Score = 39.3 bits (90), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 1/68 (1%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIE 60
           PS++ +  P G I   P  AT  D A ++   +  +AVA  IN     L  P++ G ++E
Sbjct: 398 PSEVYIFTPKGRILVLPEGATPIDFAYAVHTDVGNRAVAARINNAAVPLRTPLKTGDTVE 457

Query: 61  IITPEDPR 68
           IIT    R
Sbjct: 458 IITSPAAR 465


>gi|238922253|ref|YP_002935767.1| GTP pyrophosphokinase [Eubacterium eligens ATCC 27750]
 gi|238873925|gb|ACR73633.1| GTP pyrophosphokinase [Eubacterium eligens ATCC 27750]
          Length = 770

 Score = 39.3 bits (90), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 1/60 (1%)

Query: 10  PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPEDPR 68
           P G +KN P  +   D A SI  ++  K V   +NGK+  +   ++ G  IEIIT ++ +
Sbjct: 433 PSGDVKNLPAGSCPIDFAYSIHSAVGNKMVGARVNGKLVTIDYVIKNGDRIEIITSQNSK 492


>gi|260438422|ref|ZP_05792238.1| alanine--tRNA ligase [Butyrivibrio crossotus DSM 2876]
 gi|292809008|gb|EFF68213.1| alanine--tRNA ligase [Butyrivibrio crossotus DSM 2876]
          Length = 884

 Score = 39.3 bits (90), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 34/141 (24%), Positives = 60/141 (42%), Gaps = 10/141 (7%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSD 117
           + +   E  R      HS  H++ EA++ +    V+ A   +  D   +DF   QP + +
Sbjct: 555 VTLTVDEKKRIDTAKNHSATHLLQEALRIVLGNHVEQAGSLVTPDRLRFDFTHFQPMTEE 614

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           E+ ++E  + E I +      + L+ E A      KK   K    E     + V +   G
Sbjct: 615 EIEKVEAIVNEQIEKSIDVETKVLAIEDA------KKTGAKALFNEKYG--DTVRVVCMG 666

Query: 178 EWF-DLCRGPHVRSTGQVKKF 197
           ++  + C G HV +TG +  F
Sbjct: 667 DFSKEFCGGTHVSNTGLINSF 687


>gi|146084142|ref|XP_001464936.1| bifunctional aminoacyl-trna synthetase [Leishmania infantum JPCM5]
 gi|134069031|emb|CAM67175.1| putative bifunctional aminoacyl-tRNA synthetase [Leishmania
           infantum JPCM5]
          Length = 810

 Score = 39.3 bits (90), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 76/372 (20%), Positives = 142/372 (38%), Gaps = 60/372 (16%)

Query: 268 WHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQH-LWQQSGHWDSYRANMFAVKCADD 326
           W    WK  Q  +     K+    E+   P  + ++ L ++  H + +   +  V  A D
Sbjct: 339 WAYYVWKCVQRFLGGKIEKL--GVEDCYFPMFVSRNCLEREKDHIEGFAPEVAWVTRAGD 396

Query: 327 TIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
           T  + +  A++P +       +   ++S+R+LPVRL  + +V R E S      +R R F
Sbjct: 397 TELE-QPVAVRPTSETVMYPYYAKWIRSHRDLPVRLNMWNNVIRWEFSHPT-PFIRTREF 454

Query: 387 TQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
              + H    K E+   E L I     S+Y+      ++    T  EK  G D       
Sbjct: 455 LWQEGHCAWAKAEECAKEVLDILECYASVYEQLLAVPVVRGRKTEKEKFAGGD------- 507

Query: 446 NIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPS 504
                                        Y    E  + +A+GR  Q  T   +  N   
Sbjct: 508 -----------------------------YTTTVETFI-EAVGRGCQGATSHNLGQNFGK 537

Query: 505 RFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIV--T 558
            F+  + +  + +   ++  +  +G   R IG+MI    +N    +P  ++  Q I+   
Sbjct: 538 MFDIRFQDPENNE-QTLIPWQNSWGLSTRVIGVMIMVHGDNRGMVMPPRVASTQVIIIPV 596

Query: 559 TITSSAVEYAQE--------IANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIIC 609
            IT    E A++        + + L    +  + D R N +  ++     +K +P+ +  
Sbjct: 597 GITKDTTEEARQELLASCRRLESELCEGGVRAKCDLRDNYSPGWRFNHWEVKGVPLRVEL 656

Query: 610 GDKEASERSIGI 621
           G +E +ERS+ +
Sbjct: 657 GPRELAERSLAV 668


>gi|115491451|ref|XP_001210353.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|114197213|gb|EAU38913.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 564

 Score = 39.3 bits (90), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 4/82 (4%)

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
           F L P +      +     KSYR+LP+R+ +    YR+EP     GL+R R F   D + 
Sbjct: 83  FLLAPTHEEEITTLVGSLTKSYRDLPLRVYQISRKYRDEPRPR-QGLLRGREFIMKDLYT 141

Query: 394 FCTKEQMFNECLKIHNLIISIY 415
           F   +    E LK +  + + Y
Sbjct: 142 F---DYSMEEALKTYGQVRAAY 160


>gi|330802829|ref|XP_003289415.1| hypothetical protein DICPUDRAFT_153802 [Dictyostelium purpureum]
 gi|325080498|gb|EGC34051.1| hypothetical protein DICPUDRAFT_153802 [Dictyostelium purpureum]
          Length = 925

 Score = 39.3 bits (90), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 68/158 (43%), Gaps = 19/158 (12%)

Query: 47  VCDLSDPVREGSIEIITPEDP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY 105
           + ++ D + EGSI     E   R    I HS  H++  A++ I  +  V  G  +     
Sbjct: 576 ITNVQDDLAEGSIVSSQVEKSVRKQTAIHHSATHLLHAALREIIGKSVVQAGSFVGPNIL 635

Query: 106 -YDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKAR-----ELFESKKEAYKV 159
            +DF   +  S  E+ QIEK + ++I +D       + + +A      +LF S+K    V
Sbjct: 636 RFDFTHGKKLSVKEIDQIEKWVNDVIDQDIYLETHEMPYSEASKGDAIQLF-SEKYTDLV 694

Query: 160 EILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
            ++ SIP          G   +LC G HV  +  +  F
Sbjct: 695 RVV-SIP----------GFSKELCGGTHVERSSDIHHF 721


>gi|295688603|ref|YP_003592296.1| alanyl-tRNA synthetase [Caulobacter segnis ATCC 21756]
 gi|295430506|gb|ADG09678.1| alanyl-tRNA synthetase [Caulobacter segnis ATCC 21756]
          Length = 880

 Score = 39.3 bits (90), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 40/166 (24%), Positives = 77/166 (46%), Gaps = 14/166 (8%)

Query: 48  CDLSDPVREGSIEIITPE-DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG--F 104
            +LS  ++ G   +++ + D R      HS AH++  A+  +        G ++ DG   
Sbjct: 535 VELSGELKVGDKVVVSVDADRRQTTRSNHSAAHLVHAALHHVLGPHVAQKGQMV-DGERM 593

Query: 105 YYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKV 159
            +DF    P + +EL +IE ++  +I ++ P   + ++ ++A E     LF  +K    V
Sbjct: 594 RFDFSHGGPLTPEELDKIEAEVNAVIRQNVPAETKEMAPQEAIEAGAVALF-GEKYGDSV 652

Query: 160 EILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAG 205
            +L      +++T   +    +LC G HV  TG +   FK++   G
Sbjct: 653 RVL---TLGKSLTDESKAYSVELCGGTHVSRTGDI-ALFKIVSEQG 694


>gi|283795474|ref|ZP_06344627.1| GTP diphosphokinase [Clostridium sp. M62/1]
 gi|291077138|gb|EFE14502.1| GTP diphosphokinase [Clostridium sp. M62/1]
          Length = 761

 Score = 39.3 bits (90), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 1/60 (1%)

Query: 10  PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPEDPR 68
           P G +KN P  +T  D A SI  ++  K V   +NG + ++   ++ G  IEI+T ++ +
Sbjct: 421 PSGDVKNLPSGSTPIDFAYSIHSAVGNKMVGAKVNGMLVNIDYEIKNGDRIEILTSQNSK 480


>gi|295091158|emb|CBK77265.1| (p)ppGpp synthetase, RelA/SpoT family [Clostridium cf.
           saccharolyticum K10]
          Length = 761

 Score = 39.3 bits (90), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 1/60 (1%)

Query: 10  PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPEDPR 68
           P G +KN P  +T  D A SI  ++  K V   +NG + ++   ++ G  IEI+T ++ +
Sbjct: 421 PSGDVKNLPSGSTPIDFAYSIHSAVGNKMVGAKVNGMLVNIDYEIKNGDRIEILTSQNSK 480


>gi|261880084|ref|ZP_06006511.1| alanine-tRNA ligase [Prevotella bergensis DSM 17361]
 gi|270333239|gb|EFA44025.1| alanine-tRNA ligase [Prevotella bergensis DSM 17361]
          Length = 886

 Score = 39.3 bits (90), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 30/133 (22%), Positives = 58/133 (43%), Gaps = 8/133 (6%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D R+ +   H+  H++  A++ +  + V+     +  D   +DF   Q  + +EL ++E+
Sbjct: 567 DKRTASAANHTATHLLDYALKKVLGDHVEQKGSYVSADTLRFDFAHFQKVTDEELREVER 626

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
            +  ++  D P     +   +   + E+KK        E    K  V + R G   + C 
Sbjct: 627 LVNRLVREDHP-----MDEHRDTPVEEAKKMGAVALFGEKYGDK--VRVVRFGPSCEFCG 679

Query: 185 GPHVRSTGQVKKF 197
           G H +STG +  F
Sbjct: 680 GIHAKSTGCIGMF 692


>gi|255007587|ref|ZP_05279713.1| alanyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
 gi|313145280|ref|ZP_07807473.1| alanyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
 gi|313134047|gb|EFR51407.1| alanyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
          Length = 872

 Score = 39.3 bits (90), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 30/130 (23%), Positives = 54/130 (41%), Gaps = 8/130 (6%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEK 124
           D R+     HS  H++ EA++ +  E     G ++  D   +DF   Q  + +EL ++E 
Sbjct: 554 DKRAACAANHSATHLLDEALREVLGEHVEQKGSLVTPDSLRFDFSHFQKVTDEELRKVEH 613

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
            +   I  + P        E      E  KE   + +       ++V + + G   + C 
Sbjct: 614 LVNAKIRANVPL------QEHRNIPIEEAKELGAIALFGE-KYGDHVRVIQFGSSIEFCG 666

Query: 185 GPHVRSTGQV 194
           G HV +TG +
Sbjct: 667 GTHVAATGNI 676


>gi|328955592|ref|YP_004372925.1| alanyl-tRNA synthetase [Coriobacterium glomerans PW2]
 gi|328455916|gb|AEB07110.1| alanyl-tRNA synthetase [Coriobacterium glomerans PW2]
          Length = 885

 Score = 39.3 bits (90), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 30/129 (23%), Positives = 57/129 (44%), Gaps = 18/129 (13%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           H+  H++  A++ +  E     G  ++D    +DF      ++D+LA +E ++ + I  D
Sbjct: 571 HTATHLLHAALRGVLGEHVAQEGSFVDDERLRFDFTHFSACTADQLAAVEDRVNDWIFED 630

Query: 134 SPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
            P     +  E+A+      LF S+K + +V ++    A             +LC G H 
Sbjct: 631 LPVATDVMDLEEAKSSGALALF-SEKYSSRVRVVSCGTASR-----------ELCGGTHA 678

Query: 189 RSTGQVKKF 197
            +T Q+  F
Sbjct: 679 HTTSQLGIF 687


>gi|3355717|emb|CAA73496.1| seryl-tRNA synthetase [Zea mays]
          Length = 489

 Score = 39.3 bits (90), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 39/183 (21%), Positives = 81/183 (44%), Gaps = 20/183 (10%)

Query: 244 RDHRKLAREMDLFHI--AEDGSGVIFWHRKGWKIF--QTLISYMRRKI-KDDYEEINTPQ 298
           +DH +L +E+DLF    A + SG  F++ K   +     L+ +   ++ K  +  + TP+
Sbjct: 185 KDHLQLGKELDLFDFDAAAEVSGSKFYYLKNEAVLLEMALVIWAISEVSKKGFTPLITPE 244

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++   + ++ G        +++++ +D     L   A  P+       +    + +   L
Sbjct: 245 IVRSSVVEKCGFSKGKNTQVYSIEDSDQC---LIGTAEIPVG-----GIHMDSILAESAL 296

Query: 359 PVRLAEFGSVYRNE---PSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           P++   +   +R E      +  GL RV  F++ +  +FC  E    E  K H  +I+I 
Sbjct: 297 PLKYVAYSHCFRTEAGAAGAATRGLYRVHQFSKVEMFIFCRPE----ESGKWHEELITIE 352

Query: 416 KDF 418
           +D 
Sbjct: 353 EDL 355


>gi|87122506|ref|ZP_01078386.1| alanyl-tRNA synthetase [Marinomonas sp. MED121]
 gi|86162299|gb|EAQ63584.1| alanyl-tRNA synthetase [Marinomonas sp. MED121]
          Length = 871

 Score = 39.3 bits (90), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 39/164 (23%), Positives = 78/164 (47%), Gaps = 24/164 (14%)

Query: 54  VREGSIEI------ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYY 106
           +REGSI +            R+   + HS  H+M EA++ +  +     G + + +   +
Sbjct: 532 LREGSITLGDKLTATVDASLRAATGLNHSATHLMHEALRRVVGDHVHQKGSLCDAERLRF 591

Query: 107 DFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEI 161
           DF   +  ++ E+ Q+E  + E I  +   L + +  E A+E     LF  K ++ +V +
Sbjct: 592 DFSHFEGVTAAEIEQVEDMVNEQIRLNHEVLTEEMDIESAKERGAMALFGEKYDS-QVRV 650

Query: 162 LESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAG 205
           L ++ ++ ++         +LC G HV+ TG +   FK++  +G
Sbjct: 651 L-TMGSEYSI---------ELCGGTHVKRTGDI-GVFKIVAESG 683


>gi|284007755|emb|CBA73582.1| alanyl-tRNA synthetase [Arsenophonus nasoniae]
          Length = 899

 Score = 39.3 bits (90), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 74/169 (43%), Gaps = 21/169 (12%)

Query: 36  KKAVAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVA 95
           K A A+   GKV   S  V   S+E     + R+   + HS  H++  A++ +  E    
Sbjct: 549 KYAQAIGHLGKVITGSITVNN-SVEAKIDIERRNAIRLNHSATHLLHAALRDVLGEHVSQ 607

Query: 96  IGPIIEDGFY-YDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----L 149
            G ++ + +  +DF      +  ++ QIE  +   I ++ P +   +  + A+E     L
Sbjct: 608 KGSLVNEKYLRFDFSHFAAMTPKQIRQIEDIVNCQIRKNDPIITTLMDLDAAKEKGAMAL 667

Query: 150 FESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
           F  K +A KV +L SI           G++  +LC G H   TG +  F
Sbjct: 668 FGEKYDA-KVRVL-SI-----------GDFSIELCGGTHANRTGDIGLF 703


>gi|304316715|ref|YP_003851860.1| alanyl-tRNA synthetase [Thermoanaerobacterium thermosaccharolyticum
           DSM 571]
 gi|302778217|gb|ADL68776.1| alanyl-tRNA synthetase [Thermoanaerobacterium thermosaccharolyticum
           DSM 571]
          Length = 879

 Score = 39.3 bits (90), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 35/150 (23%), Positives = 65/150 (43%), Gaps = 9/150 (6%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQS-IWPEVQVAIGPIIEDGFYYDFDKEQPFSS 116
           ++E +  E  R      H+  H++  A++  I   V  A   +  +   +DF   Q  + 
Sbjct: 547 TVEALIDEKNRLSTARNHTATHLLHSALRKFIGDHVHQAGSLVTPERLRFDFTHYQALTD 606

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
           +E+  IE ++ E I  +       +SH++A    +    A   E    +    NV+ Y +
Sbjct: 607 EEIKTIENEVNEKIYENIDVSVDIMSHDEA---LKKGAMALFQEKYGDVVRVVNVSDYSK 663

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVAGA 206
               +LC G HV +TG +   FK++  +G 
Sbjct: 664 ----ELCGGTHVDNTGNI-GVFKIISESGV 688


>gi|254779785|ref|YP_003057891.1| alanyl-tRNA synthetase [Helicobacter pylori B38]
 gi|254001697|emb|CAX29926.1| Alanyl-tRNA synthetase (Alanine--tRNA ligase) (AlaRS) [Helicobacter
           pylori B38]
          Length = 847

 Score = 39.3 bits (90), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 33/165 (20%), Positives = 71/165 (43%), Gaps = 9/165 (5%)

Query: 42  AINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE 101
            +N  + ++   +++G   I    D R      HS  H++  A++ +        G ++E
Sbjct: 521 GLNFSLLEIKKALKKGDQVIAQVSDERLEIAKHHSATHLLQSALREVLGSHVSQAGSLVE 580

Query: 102 DG-FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVE 160
                +DF   +  +++EL ++E  +      ++   K   SH +   L ++K +     
Sbjct: 581 SKRLRFDFSHAKALNNEELEKVEDLV------NAQIFKHLNSHVEHMPLNQAKDKGALAL 634

Query: 161 ILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAG 205
             E       V  +++    +LC G HV +TG +   F+++K +G
Sbjct: 635 FSEKYAENVRVVSFKEAS-IELCGGIHVENTGLIGG-FRIVKESG 677


>gi|154253021|ref|YP_001413845.1| alanyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1]
 gi|154156971|gb|ABS64188.1| alanyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1]
          Length = 913

 Score = 39.3 bits (90), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 50/215 (23%), Positives = 94/215 (43%), Gaps = 28/215 (13%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFSSD 117
           +E+   +  R      HS  H++ EA++ +  +     G ++  +   +DF   +P + +
Sbjct: 570 VEMKVDKSLRDATRANHSATHLLHEALRRVLGDHVTQKGSMVGPERLRFDFSHPKPMTPE 629

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKA-----RELFESKKEAYKVEILESIPAKENVT 172
           E++++E  +  +I +++    + ++ E A       LF  +K   +V +L      EN  
Sbjct: 630 EISEVETIVNRVIRQNAEVTTRLMTPEDAIAAGALALF-GEKYGEEVRVLAMGLDDENP- 687

Query: 173 LYRQGEW-FDLCRGPHVRSTGQVKKFFKLMK---VAGAYWR-----GDSNRPML---SRI 220
               G +  +LC G HVR  G +   FK++    VA    R     G+  R  L    RI
Sbjct: 688 ---NGTYSVELCGGTHVRRVGDI-AIFKIVSESAVASGIRRIEALTGEGARAYLVAQDRI 743

Query: 221 YGTAWN----TQQELTQYLYFLEESEKRDHRKLAR 251
              A +    + ++L   +  L E  KR  R+LA+
Sbjct: 744 AKEAASALRISTEDLPARVVSLMEERKRLERELAQ 778


>gi|83590480|ref|YP_430489.1| alanyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
 gi|123524268|sp|Q2RHZ3|SYA_MOOTA RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|83573394|gb|ABC19946.1| alanyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
          Length = 881

 Score = 39.3 bits (90), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 43/212 (20%), Positives = 85/212 (40%), Gaps = 30/212 (14%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSD 117
           +EI    + R      H+  H++  A+++I  E V  A   +  +   +DF    P + +
Sbjct: 552 VEIAVDRERRQATARNHTVTHLLHRALKNILGEHVNQAGSLVTPERLRFDFTHFAPLTGE 611

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFES----KKEAYKVEILESIPAKENVTL 173
           EL  +E ++ + I  + P      S+++A+ +  +    +K   +V +++       +  
Sbjct: 612 ELRAVEAEVNQKILANLPVTTLETSYQEAKAMGATALFGEKYGERVRVVK-------IDA 664

Query: 174 YRQGEWFDLCRGPHVRSTGQVKKF--------------FKLMKVAGAYWRGDSNRPMLSR 219
           Y      +LC G H+ ST +   F               + +  A A      +R  L+ 
Sbjct: 665 YS----MELCGGTHLGSTSEAGSFRLVSESGIGAGVRRVEAVTGAAALEMALQDRQELAT 720

Query: 220 IYGTAWNTQQELTQYLYFLEESEKRDHRKLAR 251
           I G       +  Q +  L E  K + R+LA+
Sbjct: 721 IAGLLKVPPDQAIQRVRHLLEQNKENERELAQ 752


>gi|304413367|ref|ZP_07394840.1| Alanyl-tRNA synthetase [Candidatus Regiella insecticola LSR1]
 gi|304284210|gb|EFL92603.1| Alanyl-tRNA synthetase [Candidatus Regiella insecticola LSR1]
          Length = 893

 Score = 39.3 bits (90), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 37/179 (20%), Positives = 73/179 (40%), Gaps = 17/179 (9%)

Query: 24  SDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAE 83
           +D A    R   K    +A  G++      + E SI      + R    + HS  H++  
Sbjct: 532 NDSAHFTVRDTQKHGATIAHVGQLTTGCLRIGE-SINAAVDAERRHRIRLNHSATHLLHA 590

Query: 84  AVQSIWPEVQVAIGPIIEDGFY-YDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLS 142
           A++    +     G ++ D +  +DF   Q  +  ++ Q+E ++   I  + P   + ++
Sbjct: 591 ALRQTLGQHVAQKGSLVNDHYLRFDFSHSQAMTKAQIQQVENQVNAEIRANLPIETKIMA 650

Query: 143 HEKAREL----FESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
            E+A++     F  +K + KV +L        +  +      +LC G H   TG +  F
Sbjct: 651 LEEAKKTGAMAFFGEKYSDKVRVL-------TIGTFS----IELCGGTHTNRTGDIGLF 698


>gi|134295482|ref|YP_001119217.1| alanyl-tRNA synthetase [Burkholderia vietnamiensis G4]
 gi|205830008|sp|A4JDM9|SYA_BURVG RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|134138639|gb|ABO54382.1| alanyl-tRNA synthetase [Burkholderia vietnamiensis G4]
          Length = 874

 Score = 39.3 bits (90), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 31/129 (24%), Positives = 62/129 (48%), Gaps = 19/129 (14%)

Query: 75  HSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H+M +A++ +    VQ     +  D   +DF    P + DE+ ++E+ + + I  +
Sbjct: 564 HSATHLMHKALREVLGAHVQQKGSLVDADKTRFDFAHNAPLTDDEIRRVEQIVNDEILAN 623

Query: 134 SPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           +P + + + +++A +     LF  +K   +V +L+   ++E            LC G HV
Sbjct: 624 APGIVRVMPYDEAVKGGAMALF-GEKYGDEVRVLDLGFSRE------------LCGGTHV 670

Query: 189 RSTGQVKKF 197
           + TG +  F
Sbjct: 671 QRTGDIGLF 679


>gi|108864577|gb|ABA94785.2| seryl-tRNA synthetase family protein, expressed [Oryza sativa
           Japonica Group]
          Length = 382

 Score = 39.3 bits (90), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 38/164 (23%), Positives = 73/164 (44%), Gaps = 15/164 (9%)

Query: 244 RDHRKLAREMDLFHI--AEDGSGVIFWHRKGWKIF--QTLISYMRRKI-KDDYEEINTPQ 298
           RDH +L +E+DLF    A + SG  F++ K   +     L+++   ++ K  +  + TP+
Sbjct: 78  RDHLQLGKELDLFDFDAAAEVSGSKFYYLKNEAVLLEMALVNWAITEVSKKGFTPLITPE 137

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++   + ++ G     RA    V   D++ + L   A  P+       +    +    +L
Sbjct: 138 IVRSSVVEKCGFQP--RAQNTQVYSIDNSDQCLIGTAEIPVG-----GIHMDSILPDSDL 190

Query: 359 PVRLAEFGSVYRNE---PSGSLHGLMRVRGFTQDDAHVFCTKEQ 399
           P +   +   +R E      +  GL RV  F++ +  VFC  E+
Sbjct: 191 PRKYVAYSHCFRTEAGAAGAATRGLYRVHQFSKVEMFVFCRPEE 234


>gi|315222474|ref|ZP_07864372.1| GTP diphosphokinase [Streptococcus anginosus F0211]
 gi|315188442|gb|EFU22159.1| GTP diphosphokinase [Streptococcus anginosus F0211]
          Length = 738

 Score = 39.3 bits (90), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 19/67 (28%), Positives = 37/67 (55%), Gaps = 1/67 (1%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SI 59
           +  +I +  PDG++++ P  +   D A  I   + +KAV   +NG++  L+  ++ G  +
Sbjct: 390 LAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKAVGAKVNGRMVPLTTKLKTGDQV 449

Query: 60  EIITPED 66
           EIIT  +
Sbjct: 450 EIITSSN 456


>gi|167764447|ref|ZP_02436568.1| hypothetical protein BACSTE_02831 [Bacteroides stercoris ATCC
           43183]
 gi|167697116|gb|EDS13695.1| hypothetical protein BACSTE_02831 [Bacteroides stercoris ATCC
           43183]
          Length = 582

 Score = 39.3 bits (90), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 27/103 (26%), Positives = 52/103 (50%), Gaps = 17/103 (16%)

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIP--AKENVT 172
           + +++  +EK + E+IAR  P   ++++  +A+  F+          LE +P  A E V 
Sbjct: 486 TEEQIESLEKAVNEVIARHLPVTTEFIAQAEAKGRFD----------LERLPEDASETVR 535

Query: 173 LYRQGEWFD-LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNR 214
           + + G++ + LC G HV +T ++  F    K+    W  +S R
Sbjct: 536 IVKVGDYDECLCIGTHVVNTSEIGTF----KIISHDWDEESKR 574


>gi|157867949|ref|XP_001682528.1| bifunctional aminoacyl-trna synthetase; prolyl-trna synthetase
           [Leishmania major strain Friedlin]
 gi|68125982|emb|CAJ04056.1| putative prolyl-tRNA synthetase [Leishmania major strain Friedlin]
          Length = 731

 Score = 39.3 bits (90), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 76/372 (20%), Positives = 141/372 (37%), Gaps = 60/372 (16%)

Query: 268 WHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQH-LWQQSGHWDSYRANMFAVKCADD 326
           W    WK  Q  +     K+    E+   P  + +  L ++  H + +   +  V  A D
Sbjct: 260 WAYYVWKCVQRFLGGKIEKL--GVEDCYFPMFVSRSCLEREKDHIEGFAPEVAWVTRAGD 317

Query: 327 TIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
           T  + +  A++P +       +   ++S+R+LPVRL  + +V R E S      +R R F
Sbjct: 318 TELE-QPVAVRPTSETVMYPYYAKWIRSHRDLPVRLNMWNNVIRWEFSHPTP-FIRTREF 375

Query: 387 TQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
              + H    K E+   E L+I     S+Y+      ++    T  EK  G D       
Sbjct: 376 LWQEGHCAWAKAEECAKEVLEILECYASVYEQLLAVPVVRGRKTEKEKFAGGD------- 428

Query: 446 NIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPS 504
                                        Y    E  + +A+GR  Q  T   +  N   
Sbjct: 429 -----------------------------YTTTVETFI-EAVGRGCQGATSHNLGQNFGK 458

Query: 505 RFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIV--T 558
            F+  + +  + +   ++  +  +G   R IG+MI    +N    +P  ++  Q I+   
Sbjct: 459 MFDIRFQDPENNE-QTLIPWQNSWGLSTRVIGVMIMVHGDNRGMVMPPRVASTQVIIIPV 517

Query: 559 TITSSAVEYAQE--------IANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIIC 609
            IT    E A++        + + L    +    D R N +  ++     +K +P+ +  
Sbjct: 518 GITKDTTEEARQELLASCWRLESELCEGGVRARCDLRDNYSPGWRFNHWEVKGVPLRVEL 577

Query: 610 GDKEASERSIGI 621
           G +E +ERS+ +
Sbjct: 578 GPRELAERSLAV 589


>gi|15679834|ref|NP_276952.1| glycyl-tRNA synthetase [Methanothermobacter thermautotrophicus str.
           Delta H]
 gi|3334352|sp|O27874|SYG_METTH RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|2622981|gb|AAB86312.1| glycyl-tRNA synthetase [Methanothermobacter thermautotrophicus str.
           Delta H]
          Length = 565

 Score = 39.3 bits (90), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 2/69 (2%)

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYR-ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
           +T  L+P    G    F   L+ +R  LP  + + G  YRNE S    G++R+R FTQ +
Sbjct: 157 KTGYLRPETAQGIFIPFKRLLRFFRNRLPFGVVQLGKSYRNEISPR-QGVIRLREFTQAE 215

Query: 391 AHVFCTKEQ 399
           A +F   E 
Sbjct: 216 AEIFVDPEH 224


>gi|319901112|ref|YP_004160840.1| alanyl-tRNA synthetase [Bacteroides helcogenes P 36-108]
 gi|319416143|gb|ADV43254.1| alanyl-tRNA synthetase [Bacteroides helcogenes P 36-108]
          Length = 872

 Score = 39.3 bits (90), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 33/131 (25%), Positives = 58/131 (44%), Gaps = 10/131 (7%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEK 124
           D R+     HS  H++  A++ +  +     G ++  D   +DF   Q  + +EL QIE 
Sbjct: 554 DKRAACAANHSATHLLDAALREVLGDHVEQKGSLVTPDSLRFDFSHFQKVTDEELRQIEH 613

Query: 125 KMQEIIARDSPFLKQYLSHEKAREL-FESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
                I  + P LK+Y      R++  E  KE   + +       ++V + + G   + C
Sbjct: 614 IANAKIRANIP-LKEY------RDMPIEDAKELGAIALFGE-KYGDHVRVIQFGSSVEFC 665

Query: 184 RGPHVRSTGQV 194
            G HV +TG +
Sbjct: 666 GGTHVAATGNI 676


>gi|212691330|ref|ZP_03299458.1| hypothetical protein BACDOR_00822 [Bacteroides dorei DSM 17855]
 gi|237712222|ref|ZP_04542703.1| alanyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA]
 gi|237726368|ref|ZP_04556849.1| alanyl-tRNA synthetase [Bacteroides sp. D4]
 gi|212666083|gb|EEB26655.1| hypothetical protein BACDOR_00822 [Bacteroides dorei DSM 17855]
 gi|229434894|gb|EEO44971.1| alanyl-tRNA synthetase [Bacteroides dorei 5_1_36/D4]
 gi|229453543|gb|EEO59264.1| alanyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA]
          Length = 152

 Score = 39.3 bits (90), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 27/124 (21%), Positives = 58/124 (46%), Gaps = 9/124 (7%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDS 134
           H+  H++   + +++   +     I       DF  +      ++ +IE  + E++ R+ 
Sbjct: 18  HTTEHVINRTMVNLFGCGRAISAHIERKKSKLDFALQTCPEETDITRIENTVNEVLRRNL 77

Query: 135 PFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD-LCRGPHVRSTGQ 193
           P   +++S E+A   F+ K+   K        A E V + + G++ + LC G HV++T +
Sbjct: 78  PVTMEFISQEEAIGRFDMKRLPEK--------ASETVRIVKVGDYDECLCIGQHVKNTSE 129

Query: 194 VKKF 197
           +  F
Sbjct: 130 IGTF 133


>gi|153953949|ref|YP_001394714.1| alanyl-tRNA synthetase [Clostridium kluyveri DSM 555]
 gi|219854563|ref|YP_002471685.1| hypothetical protein CKR_1220 [Clostridium kluyveri NBRC 12016]
 gi|205830035|sp|A5N7T5|SYA_CLOK5 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|146346830|gb|EDK33366.1| AlaS [Clostridium kluyveri DSM 555]
 gi|219568287|dbj|BAH06271.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 879

 Score = 39.3 bits (90), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 40/164 (24%), Positives = 77/164 (46%), Gaps = 21/164 (12%)

Query: 75  HSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           H+  H++ EA++ +  E V  +   + E    +DF+  +  +  +L ++E+ + E I + 
Sbjct: 566 HTSTHLLGEALRRVLGEHVHQSGSYVDEHRLRFDFNHFESLNDKQLREVEELVNENIRKA 625

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF-DLCRGPHVRSTG 192
                  +S E+A       K++  V I +S  + E V +   G++  +LC G HV ++G
Sbjct: 626 KTVNTNLMSLEEA-------KKSGAVAIFDSKYSDE-VRVVSIGDFSRELCGGTHVGNSG 677

Query: 193 QVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           ++   FK++  AG           + RI      T +E  +YLY
Sbjct: 678 EI-GLFKIVSEAGI-------AAGIRRIEAV---TGREAVEYLY 710


>gi|50426035|ref|XP_461614.1| DEHA2G01694p [Debaryomyces hansenii CBS767]
 gi|49657284|emb|CAG90061.1| DEHA2G01694p [Debaryomyces hansenii]
          Length = 460

 Score = 39.3 bits (90), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 36/158 (22%), Positives = 65/158 (41%), Gaps = 8/158 (5%)

Query: 267 FWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD 325
           F    G  + Q LI+Y +    K+DY  +  P ++++ +  ++     +   ++ V   D
Sbjct: 179 FLRNYGVFLNQALINYGLSFLAKNDYTPLQAPVMMNKEVMAKTAQLSQFDEELYKVMDGD 238

Query: 326 DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG---SLHGLMR 382
           D  K L   + +P++       F        +LPVR A + S +R E         G+ R
Sbjct: 239 DE-KYLIATSEQPISAYHAGEWFE---SPQEQLPVRYAGYSSCFRREAGSHGKDAWGIFR 294

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           V  F + +  V    E+ + E  ++  L    YK  G 
Sbjct: 295 VHAFEKIEQFVLTEPEKSWEEFDRMIGLSEEFYKSLGL 332


>gi|291166156|gb|EFE28202.1| phosphoribulokinase family protein [Filifactor alocis ATCC 35896]
          Length = 542

 Score = 39.3 bits (90), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 41/180 (22%), Positives = 75/180 (41%), Gaps = 7/180 (3%)

Query: 39  VAVAINGKVCDLSDPVRE-GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIG 97
           +A  +N  +  LS  V E   I  +   D     +   S   +   A + I     V + 
Sbjct: 26  LAAKVNNNLYPLSYEVEEEAEITFLDITDNDGRRIYMTSLTFLFTRAAREILDGAIVIVK 85

Query: 98  PIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLK-QYLSHEKARELFESKKEA 156
             +++G Y+D + ++   S  +  IEK+M++++  +    +  Y   E  + L E K  +
Sbjct: 86  HSLQNGIYFDIEYKETLKSTHVRLIEKRMRQLVEENVLIERISYTREEAIKRLQEDKLSS 145

Query: 157 YKVEILESIPAKENVT--LYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNR 214
              ++L     K++    +YR G   D   G  V STG +K F+  +   G    G S +
Sbjct: 146 NNSQLLR---YKDSCMTHIYRCGWLQDYYYGYMVPSTGYLKVFYLHLYNHGIVLLGPSEK 202


>gi|145589259|ref|YP_001155856.1| (p)ppGpp synthetase I, SpoT/RelA [Polynucleobacter necessarius
           subsp. asymbioticus QLW-P1DMWA-1]
 gi|145047665|gb|ABP34292.1| (p)ppGpp synthetase I, SpoT/RelA [Polynucleobacter necessarius
           subsp. asymbioticus QLW-P1DMWA-1]
          Length = 774

 Score = 39.3 bits (90), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 36/78 (46%), Gaps = 5/78 (6%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IE 60
           P  + +  P G I+  P  AT  D A SI   L    VAV ING    L   ++ G  IE
Sbjct: 435 PDAVYVFTPAGQIRALPRGATALDFAYSIHSDLGNTCVAVKINGLQLPLRSELKNGDIIE 494

Query: 61  IITPE----DPRSLAVIR 74
           +IT      +P  LA +R
Sbjct: 495 VITSANSQPNPGWLAFVR 512


>gi|148657293|ref|YP_001277498.1| histidyl-tRNA synthetase [Roseiflexus sp. RS-1]
 gi|148569403|gb|ABQ91548.1| histidyl-tRNA synthetase [Roseiflexus sp. RS-1]
          Length = 484

 Score = 39.3 bits (90), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 20/85 (23%), Positives = 39/85 (45%)

Query: 556 IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEAS 615
           +V      +  YA E+A LL++H  +  TD R   ++  +R+   + +  + + G  E +
Sbjct: 398 MVVATDDGSYPYALEVARLLRAHGYTAMTDVRMRGVSSNLRDADRRGVRFVAVVGADERA 457

Query: 616 ERSIGIRRFGSTTTQKVSLLDAIPI 640
           +R +  R         ++L D  PI
Sbjct: 458 QRCMSWRDLERHEEMLIALTDIPPI 482


>gi|150015988|ref|YP_001308242.1| alanyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
 gi|205830028|sp|A6LSF6|SYA_CLOB8 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|149902453|gb|ABR33286.1| alanyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
          Length = 879

 Score = 39.3 bits (90), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 29/133 (21%), Positives = 64/133 (48%), Gaps = 11/133 (8%)

Query: 75  HSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           H+  H++ +A+  +    V  A   +  D   +DF   +  + +E+ ++E  + E I   
Sbjct: 566 HTATHLLDKALTEVLGSHVHQAGSYVSNDRLRFDFSHFEAMTEEEINKVEDLVNEAITSV 625

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF-DLCRGPHVRSTG 192
           +P + + +  ++A       K +  + I +   A + V +   GE+  +LC G H+ +TG
Sbjct: 626 TPVVTEVMDLQEA-------KNSGAIGIFDDKYA-DKVRVVSAGEYSKELCGGTHIDNTG 677

Query: 193 QVKKFFKLMKVAG 205
           ++   FK++  +G
Sbjct: 678 KI-GLFKIISESG 689


>gi|212633216|ref|YP_002309741.1| bifunctional (p)ppGpp synthetase II/guanosine-3',5'-bis
           pyrophosphate 3'-pyrophosphohydrolase [Shewanella
           piezotolerans WP3]
 gi|212554700|gb|ACJ27154.1| RelA/SpoT protein [Shewanella piezotolerans WP3]
          Length = 701

 Score = 39.3 bits (90), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 1/68 (1%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIE 60
           P +I +  P+G I   PV AT  D A  +   +    V   +N +   LS P+  G ++E
Sbjct: 387 PEEIYVFTPEGRILELPVGATAVDFAYEVHTDVGNTCVGARVNRQAYPLSQPLISGQTVE 446

Query: 61  IITPEDPR 68
           IIT +  R
Sbjct: 447 IITAKGAR 454


>gi|319644298|ref|ZP_07998792.1| alanyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
 gi|317384193|gb|EFV65166.1| alanyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
          Length = 871

 Score = 39.3 bits (90), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 59/134 (44%), Gaps = 16/134 (11%)

Query: 66  DPRSLAVIRHSCAHIMAEAV-QSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           + R+     HSC H++ EA+ Q +   V+     +  +   +DF   Q  +  +L ++E 
Sbjct: 553 EKRAACAANHSCTHLLDEALRQVLGTHVEQKGSLVTPESLRFDFSHFQKVTDKQLREVEH 612

Query: 125 KMQEIIARDSPFLKQY--LSHEKARELFESK--KEAYKVEILESIPAKENVTLYRQGEWF 180
            +   I  + P L +Y  L  EKA+EL       E Y  E          V + + G   
Sbjct: 613 LVNAKIRENIP-LTEYRNLPIEKAKELGAIALFGEKYGDE----------VRVVQFGNSI 661

Query: 181 DLCRGPHVRSTGQV 194
           + C G HV +TG++
Sbjct: 662 EFCGGTHVPATGKI 675


>gi|294505017|ref|YP_003569079.1| alanyl-tRNA synthetase [Yersinia pestis Z176003]
 gi|262363080|gb|ACY59801.1| alanyl-tRNA synthetase [Yersinia pestis D106004]
 gi|262367006|gb|ACY63563.1| alanyl-tRNA synthetase [Yersinia pestis D182038]
 gi|294355476|gb|ADE65817.1| alanyl-tRNA synthetase [Yersinia pestis Z176003]
          Length = 847

 Score = 39.3 bits (90), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 32/155 (20%), Positives = 68/155 (43%), Gaps = 21/155 (13%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY-YDFDKEQPFSS 116
           S+E +     R+   + HS  H++  A++++  E     G ++ D +  +DF   +    
Sbjct: 519 SVEALVDVVRRNRIRLNHSATHLLHAALRNVLGEHVAQKGSLVNDKYLRFDFSHFEAMKP 578

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENV 171
           +++  +E  + E I R+ P   + +  + A+E     LF  K +             + V
Sbjct: 579 EQIRLVEDLVNEQIRRNMPVQTEVMELDAAKEKGAMALFGEKYD-------------DQV 625

Query: 172 TLYRQGEW-FDLCRGPHVRSTGQVKKFFKLMKVAG 205
            +   G++  +LC G H   TG +   F+++  +G
Sbjct: 626 RVLTMGDFSTELCGGTHASRTGDI-GLFRILTESG 659


>gi|193214281|ref|YP_001995480.1| seryl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110]
 gi|238692702|sp|B3QV79|SYS_CHLT3 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|193087758|gb|ACF13033.1| seryl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110]
          Length = 427

 Score = 39.3 bits (90), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 38/170 (22%), Positives = 76/170 (44%), Gaps = 19/170 (11%)

Query: 244 RDHRKLAREMDLFHIAED----GSGVIFWHRKGWKIFQTLISYMR--RKIKDDYEEINTP 297
           +DH +L + + +          G+G   +  KG  + + LI++M      K  Y+E+  P
Sbjct: 142 KDHIELGKSLGMLDFERGAKIAGAGFPLYIGKGASLERALINFMLDLHLEKHGYKEVFPP 201

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
             +++   + +G W  +   ++ +   DD I     +A+     P      +  L+S +E
Sbjct: 202 FFVNRDSLRGTGQWPKFADQVYYMN--DDDI-----YAIPTAEVPVTNMHRDEMLQS-KE 253

Query: 358 LPVRLAEFGSVYRNEPSGS----LHGLMRVRGFTQDDAHVFCTKEQMFNE 403
           LP++ A + + +R E +GS      G +RV  F + +   F   E  ++E
Sbjct: 254 LPIKYAAYSACFRRE-AGSYGKDTKGFLRVHQFNKVEMVKFVLPETSYDE 302


>gi|255691526|ref|ZP_05415201.1| alanyl-tRNA synthetase family protein [Bacteroides finegoldii DSM
           17565]
 gi|260622917|gb|EEX45788.1| alanyl-tRNA synthetase family protein [Bacteroides finegoldii DSM
           17565]
          Length = 158

 Score = 39.3 bits (90), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 23/86 (26%), Positives = 47/86 (54%), Gaps = 13/86 (15%)

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIP--AKENVT 172
           +++++  IE K+ E I+++ P   +Y++HE+A+++ +          L  +P  A E + 
Sbjct: 59  TAEQIQSIENKVNEAISQNLPVTVEYMTHEQAKDIVD----------LSKLPADASETLR 108

Query: 173 LYRQGEWFDL-CRGPHVRSTGQVKKF 197
           + R G++    C G HV +T +V  F
Sbjct: 109 IVRIGDYDACACIGLHVSNTSEVGTF 134


>gi|53712054|ref|YP_098046.1| alanyl-tRNA synthetase [Bacteroides fragilis YCH46]
 gi|253563907|ref|ZP_04841364.1| alanyl-tRNA synthetase [Bacteroides sp. 3_2_5]
 gi|265765389|ref|ZP_06093664.1| alanyl-tRNA synthetase [Bacteroides sp. 2_1_16]
 gi|59798506|sp|Q64YB4|SYA_BACFR RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|52214919|dbj|BAD47512.1| alanyl-tRNA synthetase [Bacteroides fragilis YCH46]
 gi|251947683|gb|EES87965.1| alanyl-tRNA synthetase [Bacteroides sp. 3_2_5]
 gi|263254773|gb|EEZ26207.1| alanyl-tRNA synthetase [Bacteroides sp. 2_1_16]
          Length = 872

 Score = 39.3 bits (90), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 30/130 (23%), Positives = 54/130 (41%), Gaps = 8/130 (6%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEK 124
           D R+     HS  H++ EA++ +  E     G ++  D   +DF   Q  + +EL ++E 
Sbjct: 554 DKRAACAANHSATHLLDEALREVLGEHVEQKGSLVTPDSLRFDFSHFQKVTDEELRKVEH 613

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
            +   I  + P        E      E  KE   + +       ++V + + G   + C 
Sbjct: 614 LVNAKIRANVPL------QEHRNIPIEEAKELGAIALFGE-KYGDHVRVIQFGSSIEFCG 666

Query: 185 GPHVRSTGQV 194
           G HV +TG +
Sbjct: 667 GTHVAATGNI 676


>gi|258541879|ref|YP_003187312.1| alanyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01]
 gi|256632957|dbj|BAH98932.1| alanyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01]
 gi|256636014|dbj|BAI01983.1| alanyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-03]
 gi|256639069|dbj|BAI05031.1| alanyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-07]
 gi|256642123|dbj|BAI08078.1| alanyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-22]
 gi|256645178|dbj|BAI11126.1| alanyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-26]
 gi|256648233|dbj|BAI14174.1| alanyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-32]
 gi|256651286|dbj|BAI17220.1| alanyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01-42C]
 gi|256654277|dbj|BAI20204.1| alanyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-12]
          Length = 881

 Score = 39.3 bits (90), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 42/184 (22%), Positives = 79/184 (42%), Gaps = 16/184 (8%)

Query: 22  TGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIRHSCAHI 80
           T S V  +++ +  K    +   G V + +  +R G ++      D RS     HS  H+
Sbjct: 512 TASGVKVAVTDTQKKAGDLIVHYGTVTEGT--LRPGMAVTATVDHDRRSAIRAHHSATHL 569

Query: 81  MAEAVQSIWPEVQVAIGPI-IEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQ 139
           + EA++          G +   +   +D  + +P + +ELA IE ++   I  +S  + +
Sbjct: 570 LHEALRRHLGAHVAQKGSLNTAERLRFDVSQPRPITDEELAAIEAEVNNRIRDNSQVVTR 629

Query: 140 YLS-----HEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQ 193
            ++      E A  LF  +K   +V ++      +N     +  W  +LC G HV  TG 
Sbjct: 630 SMTPDEAIAEGATALF-GEKYGDEVRVVSMGAGADN-----KSPWSMELCGGTHVNRTGD 683

Query: 194 VKKF 197
           + +F
Sbjct: 684 IGQF 687


>gi|60680248|ref|YP_210392.1| alanyl-tRNA synthetase [Bacteroides fragilis NCTC 9343]
 gi|81316682|sp|Q5LHE6|SYA_BACFN RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|60491682|emb|CAH06434.1| putative alanyl-tRNA synthetase [Bacteroides fragilis NCTC 9343]
          Length = 872

 Score = 39.3 bits (90), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 30/130 (23%), Positives = 54/130 (41%), Gaps = 8/130 (6%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEK 124
           D R+     HS  H++ EA++ +  E     G ++  D   +DF   Q  + +EL ++E 
Sbjct: 554 DKRAACAANHSATHLLDEALREVLGEHVEQKGSLVTPDSLRFDFSHFQKVTDEELRKVEH 613

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
            +   I  + P        E      E  KE   + +       ++V + + G   + C 
Sbjct: 614 LVNAKIRANVPL------QEHRNIPIEEAKELGAIALFGE-KYGDHVRVIQFGSSIEFCG 666

Query: 185 GPHVRSTGQV 194
           G HV +TG +
Sbjct: 667 GTHVAATGNI 676


>gi|254882808|ref|ZP_05255518.1| alanyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
 gi|254835601|gb|EET15910.1| alanyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
          Length = 872

 Score = 39.3 bits (90), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 59/134 (44%), Gaps = 16/134 (11%)

Query: 66  DPRSLAVIRHSCAHIMAEAV-QSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           + R+     HSC H++ EA+ Q +   V+     +  +   +DF   Q  +  +L ++E 
Sbjct: 554 EKRAACAANHSCTHLLDEALRQVLGTHVEQKGSLVTPESLRFDFSHFQKVTDKQLREVEH 613

Query: 125 KMQEIIARDSPFLKQY--LSHEKARELFESK--KEAYKVEILESIPAKENVTLYRQGEWF 180
            +   I  + P L +Y  L  EKA+EL       E Y  E          V + + G   
Sbjct: 614 LVNAKIRENIP-LTEYRNLPIEKAKELGAIALFGEKYGDE----------VRVVQFGNSI 662

Query: 181 DLCRGPHVRSTGQV 194
           + C G HV +TG++
Sbjct: 663 EFCGGTHVPATGKI 676


>gi|153810165|ref|ZP_01962833.1| hypothetical protein RUMOBE_00546 [Ruminococcus obeum ATCC 29174]
 gi|149833344|gb|EDM88425.1| hypothetical protein RUMOBE_00546 [Ruminococcus obeum ATCC 29174]
          Length = 776

 Score = 39.3 bits (90), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 1/60 (1%)

Query: 10  PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPEDPR 68
           P G +KN P  +T  D A S+  ++  + V   +NGK+  +   ++ G  IEIIT ++ +
Sbjct: 440 PQGDVKNLPNGSTPIDFAYSVHSAVGNRMVGARVNGKLVPIEYQIKNGDRIEIITSQNSQ 499


>gi|254230499|ref|ZP_04923872.1| alanyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|262393294|ref|YP_003285148.1| alanyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|151936971|gb|EDN55856.1| alanyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|262336888|gb|ACY50683.1| alanyl-tRNA synthetase [Vibrio sp. Ex25]
          Length = 860

 Score = 39.3 bits (90), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 34/149 (22%), Positives = 65/149 (43%), Gaps = 11/149 (7%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSD 117
           +  I   + R+   + HS  H++  A++ +  E     G +++ D   +DF   +  ++ 
Sbjct: 547 VATIVDAERRAAISLNHSATHLLHAALRQVLGEHVTQKGSLVKADSLRFDFSHLEAVTAA 606

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           EL ++E+ +   I R+       +  E A+     KK A     L      + V +   G
Sbjct: 607 ELKEVERLVNAQIRRNHTIETNVMDIESAK-----KKGAMA---LFGEKYDDEVRVLSMG 658

Query: 178 EW-FDLCRGPHVRSTGQVKKFFKLMKVAG 205
           ++  +LC G H  STG +   FK+   +G
Sbjct: 659 DFSTELCGGIHASSTGDI-GLFKITSESG 686


>gi|22124793|ref|NP_668216.1| alanyl-tRNA synthetase [Yersinia pestis KIM 10]
 gi|45440238|ref|NP_991777.1| alanyl-tRNA synthetase [Yersinia pestis biovar Microtus str. 91001]
 gi|108810954|ref|YP_646721.1| alanyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|145600311|ref|YP_001164387.1| alanyl-tRNA synthetase [Yersinia pestis Pestoides F]
 gi|153997648|ref|ZP_02022748.1| alanyl-tRNA synthetase [Yersinia pestis CA88-4125]
 gi|162420472|ref|YP_001605466.1| alanyl-tRNA synthetase [Yersinia pestis Angola]
 gi|165925794|ref|ZP_02221626.1| alanyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165936759|ref|ZP_02225326.1| alanyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|166010167|ref|ZP_02231065.1| alanyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166213026|ref|ZP_02239061.1| alanyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167398342|ref|ZP_02303866.1| alanyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167421632|ref|ZP_02313385.1| alanyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167423275|ref|ZP_02315028.1| alanyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|167467648|ref|ZP_02332352.1| alanyl-tRNA synthetase [Yersinia pestis FV-1]
 gi|218930326|ref|YP_002348201.1| alanyl-tRNA synthetase [Yersinia pestis CO92]
 gi|229838925|ref|ZP_04459084.1| alanyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229896406|ref|ZP_04511574.1| alanyl-tRNA synthetase [Yersinia pestis Pestoides A]
 gi|229899492|ref|ZP_04514633.1| alanyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229901170|ref|ZP_04516293.1| alanyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|270489353|ref|ZP_06206427.1| alanine--tRNA ligase [Yersinia pestis KIM D27]
 gi|20532253|sp|Q8ZBT8|SYA_YERPE RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|122385127|sp|Q1CLK9|SYA_YERPN RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|205830294|sp|A9R0V7|SYA_YERPG RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|205830295|sp|A4TQ52|SYA_YERPP RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|21957617|gb|AAM84467.1|AE013691_6 alanyl-tRNA synthetase [Yersinia pestis KIM 10]
 gi|45435094|gb|AAS60654.1| alanyl-tRNA synthetase [Yersinia pestis biovar Microtus str. 91001]
 gi|108774602|gb|ABG17121.1| alanyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|115348937|emb|CAL21896.1| alanyl-tRNA synthetase [Yersinia pestis CO92]
 gi|145212007|gb|ABP41414.1| alanyl-tRNA synthetase [Yersinia pestis Pestoides F]
 gi|149289285|gb|EDM39365.1| alanyl-tRNA synthetase [Yersinia pestis CA88-4125]
 gi|162353287|gb|ABX87235.1| alanyl-tRNA synthetase [Yersinia pestis Angola]
 gi|165915408|gb|EDR34018.1| alanyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|165922406|gb|EDR39583.1| alanyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165991074|gb|EDR43375.1| alanyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166205813|gb|EDR50293.1| alanyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166960551|gb|EDR56572.1| alanyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167050846|gb|EDR62254.1| alanyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167057445|gb|EDR67191.1| alanyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|229681895|gb|EEO77988.1| alanyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|229686984|gb|EEO79059.1| alanyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229695291|gb|EEO85338.1| alanyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229700480|gb|EEO88511.1| alanyl-tRNA synthetase [Yersinia pestis Pestoides A]
 gi|270337857|gb|EFA48634.1| alanine--tRNA ligase [Yersinia pestis KIM D27]
 gi|320016499|gb|ADW00071.1| alanyl-tRNA synthetase [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 875

 Score = 39.3 bits (90), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 32/155 (20%), Positives = 68/155 (43%), Gaps = 21/155 (13%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY-YDFDKEQPFSS 116
           S+E +     R+   + HS  H++  A++++  E     G ++ D +  +DF   +    
Sbjct: 547 SVEALVDVVRRNRIRLNHSATHLLHAALRNVLGEHVAQKGSLVNDKYLRFDFSHFEAMKP 606

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENV 171
           +++  +E  + E I R+ P   + +  + A+E     LF  K +             + V
Sbjct: 607 EQIRLVEDLVNEQIRRNMPVQTEVMELDAAKEKGAMALFGEKYD-------------DQV 653

Query: 172 TLYRQGEW-FDLCRGPHVRSTGQVKKFFKLMKVAG 205
            +   G++  +LC G H   TG +   F+++  +G
Sbjct: 654 RVLTMGDFSTELCGGTHASRTGDI-GLFRILTESG 687


>gi|301161775|emb|CBW21315.1| putative alanyl-tRNA synthetase [Bacteroides fragilis 638R]
          Length = 872

 Score = 39.3 bits (90), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 30/130 (23%), Positives = 54/130 (41%), Gaps = 8/130 (6%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEK 124
           D R+     HS  H++ EA++ +  E     G ++  D   +DF   Q  + +EL ++E 
Sbjct: 554 DKRAACAANHSATHLLDEALREVLGEHVEQKGSLVTPDSLRFDFSHFQKVTDEELRKVEH 613

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
            +   I  + P        E      E  KE   + +       ++V + + G   + C 
Sbjct: 614 LVNAKIRANVPL------QEHRNIPIEEAKELGAIALFGE-KYGDHVRVIQFGSSIEFCG 666

Query: 185 GPHVRSTGQV 194
           G HV +TG +
Sbjct: 667 GTHVAATGNI 676


>gi|17737985|ref|NP_524365.1| Seryl-tRNA synthetase [Drosophila melanogaster]
 gi|7300003|gb|AAF55175.1| Seryl-tRNA synthetase [Drosophila melanogaster]
 gi|21430868|gb|AAM51112.1| SD21818p [Drosophila melanogaster]
          Length = 417

 Score = 39.3 bits (90), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 51/233 (21%), Positives = 101/233 (43%), Gaps = 23/233 (9%)

Query: 229 QELTQYLY--FLEESEKRDHRKLAREMDLFHIAEDG--SGVIFWHRKGW--KIFQTLISY 282
           +EL QY++     +S  ++  +LAR ++L+ +   G  +G   ++  G    + Q +I Y
Sbjct: 101 RELAQYVHRQLTPQSRLKEFSELARALNLYRMDHLGNYTGHKSYYLTGQLATLEQAIIQY 160

Query: 283 MRRKIKD-DYEEINTPQVLDQHLWQQSG-HWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
             + + +  ++ I+ P +L + + +  G   +  R  ++ +   +  +      AL    
Sbjct: 161 ALQAVTEHGFKLISVPDILPKEVIESCGMRTEGERTQVYKLDTGE-CLSGTSEMAL---- 215

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG--SLHGLMRVRGFTQDDAHVFCTKE 398
                  F + L S  +LP+++      YR E SG     G+ RV  F + +    CT+E
Sbjct: 216 ----AGFFANKLLSEDQLPLKVTAVSRCYRAETSGLQEEKGIYRVHQFNKVEMFAICTEE 271

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWD-DAENIMKG 450
           Q   E  +  N+ + +++  G      +L   P   +G+ A    D E  M G
Sbjct: 272 QSEAELEEFKNIEVDLFRRLGLN---FRLLDMPPCELGAPAYQKYDIEAWMPG 321


>gi|257417382|ref|ZP_05594376.1| seryl-tRNA synthetase [Enterococcus faecalis AR01/DG]
 gi|257159210|gb|EEU89170.1| seryl-tRNA synthetase [Enterococcus faecalis ARO1/DG]
          Length = 423

 Score = 38.9 bits (89), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 33/173 (19%), Positives = 72/173 (41%), Gaps = 13/173 (7%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMR--RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMF 319
           GS  +++   G ++ + L ++M      +  Y E+ TP +++      +G +  ++ ++F
Sbjct: 160 GSRFVYYKGLGARLERALYNFMLDLHVYEHGYTEMITPYIVNDTAMFGTGQFPKFKEDVF 219

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS--- 376
            ++  D          L P         +N+ +   ++LP+        +R+E   +   
Sbjct: 220 QLQDTD--------LTLIPTAEVPLTNYYNNEILDGKDLPIYFTALSPSFRSEAGSAGRD 271

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
             GL+R+  F + +   F   E  + E  K+ N    I +  G    ++ LST
Sbjct: 272 TRGLIRLHQFNKVEMVKFSDAEHSYEELEKMTNNAEEILQKLGLPYRVMALST 324


>gi|331269730|ref|YP_004396222.1| alanyl-tRNA synthetase [Clostridium botulinum BKT015925]
 gi|329126280|gb|AEB76225.1| alanyl-tRNA synthetase [Clostridium botulinum BKT015925]
          Length = 879

 Score = 38.9 bits (89), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 40/176 (22%), Positives = 81/176 (46%), Gaps = 28/176 (15%)

Query: 43  INGKVCDLSDPVREGSI----EIITPEDPRSLAVI--RHSCAHIMAEAVQSIWPE-VQVA 95
           I GK+    + V EGSI    E++   D R    +   HS  H++  A++ +  + V  +
Sbjct: 529 IGGKIIHFVEVV-EGSINLGNEVLLEVDKRRRDNVSKNHSTTHLLHAALRKVLGDHVHQS 587

Query: 96  IGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LF 150
              + ED   +DF   +  + +EL ++E  + ++I++        ++ E+AR+     LF
Sbjct: 588 GSYVDEDKLRFDFTHFEGVTQEELTKVEDLVNDVISKVYEVETNEMTIEEARQSGAMALF 647

Query: 151 ESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKFFKLMKVAG 205
           + K               + V + + G +  +LC G H+ + G++   FK++  +G
Sbjct: 648 DEK-------------YGDKVRVVKMGNFSVELCGGTHISNIGKI-GLFKIVSESG 689


>gi|298491784|ref|YP_003721961.1| alanyl-tRNA synthetase ['Nostoc azollae' 0708]
 gi|298233702|gb|ADI64838.1| alanyl-tRNA synthetase ['Nostoc azollae' 0708]
          Length = 880

 Score = 38.9 bits (89), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 34/134 (25%), Positives = 60/134 (44%), Gaps = 13/134 (9%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEII--A 131
           H+  H++  A++ +  E     G ++  D   +DF+  +  +S+E+ QIE+ +   I  A
Sbjct: 566 HTATHLLQAALKKVVDEGISQAGSLVSFDRLRFDFNCPRALTSEEVQQIEELVNTWISEA 625

Query: 132 RDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRST 191
             +      L+  KAR       E Y  E+           +   G   +LC G HV +T
Sbjct: 626 HSAKIEVLPLAEAKARGAVAMFGEKYGNEVR---------VIEFPGVSMELCGGTHVNNT 676

Query: 192 GQVKKFFKLMKVAG 205
           G++   FK++  AG
Sbjct: 677 GEI-GVFKIISEAG 689


>gi|227518153|ref|ZP_03948202.1| seryl-tRNA synthetase [Enterococcus faecalis TX0104]
 gi|257081307|ref|ZP_05575668.1| seryl-tRNA synthetase [Enterococcus faecalis E1Sol]
 gi|227074396|gb|EEI12359.1| seryl-tRNA synthetase [Enterococcus faecalis TX0104]
 gi|256989337|gb|EEU76639.1| seryl-tRNA synthetase [Enterococcus faecalis E1Sol]
          Length = 423

 Score = 38.9 bits (89), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 34/173 (19%), Positives = 73/173 (42%), Gaps = 13/173 (7%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMR--RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMF 319
           GS  +++   G ++ + L ++M      +  Y E+ TP +++      +G +  ++ ++F
Sbjct: 160 GSRFVYYKGLGARLERALYNFMLDLHVYEHGYTEMITPYIVNDTAMFGTGQFPKFKEDVF 219

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS--- 376
            ++  D T        L P         +N+ +   ++LP+        +R+E   +   
Sbjct: 220 QLQDTDLT--------LIPTAEVPLTNYYNNEILDGKDLPIYFTALSPSFRSEAGSAGRD 271

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
             GL+R+  F + +   F   E  + E  K+ N    I +  G    ++ LST
Sbjct: 272 TRGLIRLHQFNKVEMVKFSDAEHSYEELEKMTNNAEEILQKLGLPYRVMALST 324


>gi|206889357|ref|YP_002248379.1| alanyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM 11347]
 gi|206741295|gb|ACI20352.1| alanyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM 11347]
          Length = 875

 Score = 38.9 bits (89), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 40/160 (25%), Positives = 72/160 (45%), Gaps = 19/160 (11%)

Query: 46  KVCDLSDPVREGSIEIITPEDPRSLAVIR-HSCAHIMAEAVQSIWPE-VQVAIGPIIEDG 103
           KV  +   ++EG       +  R  A+ R H+  H++  A++++  E V+ A   +  D 
Sbjct: 536 KVRVIEGTIKEGDKVFAKIDLERRKAIKRNHTATHLLHAALRTVLGEHVKQAGSLVAPDR 595

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLS-----HEKARELFESKKEAYK 158
             +DF   +  + +EL +IE+ + E I  + P   +  S     +E    LFE K E   
Sbjct: 596 LRFDFTHFEAVNDEELREIERIVNEKILENLPVKIEIKSLDEALNEGVTALFEDKYED-T 654

Query: 159 VEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFF 198
           V +++ +           G   +LC G H  STG++  F+
Sbjct: 655 VRVVKIV-----------GFSKELCGGTHCDSTGEIGSFY 683


>gi|22096191|sp|Q8TWY1|SYA_METKA RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
          Length = 915

 Score = 38.9 bits (89), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 30/123 (24%), Positives = 55/123 (44%), Gaps = 10/123 (8%)

Query: 75  HSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           H+  H++ EA + +  + V  A      D    D    +  S +EL +IE+   EI+ +D
Sbjct: 605 HTATHVILEAARRVLGDHVWQAGAHKSTDEARLDVTHHRRISDEELREIERLANEIVMKD 664

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILES--IPAKENVTLYRQGEWFDLCRGPHVRST 191
            P  K+++   +A       +  Y  E+ +   +P +E   +  +G     C G H  ST
Sbjct: 665 LPVNKRFMDRNEA-------ERRYGFELYQGGVVPGREIRVVEIEGWNVQACAGTHCDST 717

Query: 192 GQV 194
           G++
Sbjct: 718 GEI 720


>gi|331233138|ref|XP_003329230.1| prolyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309308220|gb|EFP84811.1| prolyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 301

 Score = 38.9 bits (89), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 6/102 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           EI+ P +  Q LW +SG  +     +F +K    +     +  L P +      +    +
Sbjct: 8   EISMPLLQSQKLWDRSGRSNQAGPELFRLKDRKGS-----SLLLSPTHEEEVTNLVKSDI 62

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           +S ++LP++L   G  +R+E +    GL+R R F   D + F
Sbjct: 63  QSGKQLPIKLFHIGRKFRDE-ARPRAGLLRSREFIMKDLYTF 103


>gi|295108479|emb|CBL22432.1| (p)ppGpp synthetase, RelA/SpoT family [Ruminococcus obeum A2-162]
          Length = 789

 Score = 38.9 bits (89), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 1/60 (1%)

Query: 10  PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPEDPR 68
           P G +KN P  +T  D A S+  ++  + V   +NGK+  +   ++ G  IEIIT ++ +
Sbjct: 454 PQGDVKNLPNGSTPIDFAYSVHSAVGNRMVGARVNGKLVPIEYQIKNGDRIEIITSQNSQ 513


>gi|269214760|ref|ZP_05987102.2| alanine--tRNA ligase [Neisseria lactamica ATCC 23970]
 gi|269209090|gb|EEZ75545.1| alanine--tRNA ligase [Neisseria lactamica ATCC 23970]
          Length = 885

 Score = 38.9 bits (89), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 36/178 (20%), Positives = 77/178 (43%), Gaps = 18/178 (10%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSS 116
           S+     ++ R+  +  HS  H+M +A++ +  E V+     +  +   +D    Q  ++
Sbjct: 556 SVTAKVDDEIRNANMRNHSATHLMHKALRDVLGEHVEQKGSLVTAESTRFDISHPQAVTA 615

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARE----LFESKKEAYKVEILESIPAKENVT 172
           +E+A++E+++ E +  +       +S E A++    +   +K   +V +L+         
Sbjct: 616 EEIAEVERRVNEAVLANVAVNAAIMSMEDAQKTGAMMLFGEKYGDEVRVLQ--------- 666

Query: 173 LYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQE 230
               G   +LC G HV  TG +   FK++   G    G      ++ +    W  +QE
Sbjct: 667 --MGGFSTELCGGTHVSRTGDI-GLFKIIS-EGGIAAGVRRIEAITGLNALKWAQEQE 720


>gi|29377733|ref|NP_816887.1| seryl-tRNA synthetase [Enterococcus faecalis V583]
 gi|227555642|ref|ZP_03985689.1| seryl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|229547172|ref|ZP_04435897.1| seryl-tRNA synthetase [Enterococcus faecalis TX1322]
 gi|229550742|ref|ZP_04439467.1| seryl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
 gi|255971509|ref|ZP_05422095.1| seryl-tRNA synthetase [Enterococcus faecalis T1]
 gi|255974459|ref|ZP_05425045.1| seryl-tRNA synthetase [Enterococcus faecalis T2]
 gi|256618568|ref|ZP_05475414.1| seryl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|256761814|ref|ZP_05502394.1| seryl-tRNA synthetase [Enterococcus faecalis T3]
 gi|256854941|ref|ZP_05560302.1| seryl-tRNA synthetase [Enterococcus faecalis T8]
 gi|256957056|ref|ZP_05561227.1| seryl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|256960920|ref|ZP_05565091.1| seryl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|256963942|ref|ZP_05568113.1| seryl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|257078733|ref|ZP_05573094.1| seryl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|257083965|ref|ZP_05578326.1| seryl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|257087795|ref|ZP_05582156.1| seryl-tRNA synthetase [Enterococcus faecalis D6]
 gi|257088440|ref|ZP_05582801.1| seryl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|257418881|ref|ZP_05595875.1| seryl-tRNA synthetase [Enterococcus faecalis T11]
 gi|257421304|ref|ZP_05598294.1| seryl-tRNA synthetase [Enterococcus faecalis X98]
 gi|293384815|ref|ZP_06630660.1| serine--tRNA ligase [Enterococcus faecalis R712]
 gi|293388237|ref|ZP_06632756.1| serine--tRNA ligase [Enterococcus faecalis S613]
 gi|294781208|ref|ZP_06746555.1| serine--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|300861572|ref|ZP_07107656.1| serine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|307268871|ref|ZP_07550236.1| seryl-tRNA synthetase [Enterococcus faecalis TX4248]
 gi|307273946|ref|ZP_07555156.1| seryl-tRNA synthetase [Enterococcus faecalis TX0855]
 gi|307277353|ref|ZP_07558451.1| seryl-tRNA synthetase [Enterococcus faecalis TX2134]
 gi|307283995|ref|ZP_07564165.1| seryl-tRNA synthetase [Enterococcus faecalis TX0860]
 gi|307286509|ref|ZP_07566608.1| seryl-tRNA synthetase [Enterococcus faecalis TX0109]
 gi|307289982|ref|ZP_07569908.1| seryl-tRNA synthetase [Enterococcus faecalis TX0411]
 gi|312901342|ref|ZP_07760623.1| seryl-tRNA synthetase [Enterococcus faecalis TX0470]
 gi|312902989|ref|ZP_07762178.1| seryl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|312908857|ref|ZP_07767796.1| seryl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
 gi|312952975|ref|ZP_07771831.1| seryl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|312979500|ref|ZP_07791182.1| seryl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
 gi|46577436|sp|Q82YY9|SYS2_ENTFA RecName: Full=Seryl-tRNA synthetase 2; AltName: Full=Serine--tRNA
           ligase 2; Short=SerRS 2; AltName:
           Full=Seryl-tRNA(Ser/Sec) synthetase 2
 gi|29345201|gb|AAO82957.1| seryl-tRNA synthetase [Enterococcus faecalis V583]
 gi|227175219|gb|EEI56191.1| seryl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|229304175|gb|EEN70171.1| seryl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
 gi|229307754|gb|EEN73741.1| seryl-tRNA synthetase [Enterococcus faecalis TX1322]
 gi|255962527|gb|EET95003.1| seryl-tRNA synthetase [Enterococcus faecalis T1]
 gi|255967331|gb|EET97953.1| seryl-tRNA synthetase [Enterococcus faecalis T2]
 gi|256598095|gb|EEU17271.1| seryl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|256683065|gb|EEU22760.1| seryl-tRNA synthetase [Enterococcus faecalis T3]
 gi|256709454|gb|EEU24501.1| seryl-tRNA synthetase [Enterococcus faecalis T8]
 gi|256947552|gb|EEU64184.1| seryl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|256951416|gb|EEU68048.1| seryl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|256954438|gb|EEU71070.1| seryl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|256986763|gb|EEU74065.1| seryl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|256991995|gb|EEU79297.1| seryl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|256995825|gb|EEU83127.1| seryl-tRNA synthetase [Enterococcus faecalis D6]
 gi|256997252|gb|EEU83772.1| seryl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|257160709|gb|EEU90669.1| seryl-tRNA synthetase [Enterococcus faecalis T11]
 gi|257163128|gb|EEU93088.1| seryl-tRNA synthetase [Enterococcus faecalis X98]
 gi|291077897|gb|EFE15261.1| serine--tRNA ligase [Enterococcus faecalis R712]
 gi|291082384|gb|EFE19347.1| serine--tRNA ligase [Enterococcus faecalis S613]
 gi|294451671|gb|EFG20126.1| serine--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|295112309|emb|CBL30946.1| seryl-tRNA synthetase [Enterococcus sp. 7L76]
 gi|300849033|gb|EFK76786.1| serine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|306498976|gb|EFM68468.1| seryl-tRNA synthetase [Enterococcus faecalis TX0411]
 gi|306502382|gb|EFM71659.1| seryl-tRNA synthetase [Enterococcus faecalis TX0109]
 gi|306503366|gb|EFM72615.1| seryl-tRNA synthetase [Enterococcus faecalis TX0860]
 gi|306505987|gb|EFM75159.1| seryl-tRNA synthetase [Enterococcus faecalis TX2134]
 gi|306509254|gb|EFM78314.1| seryl-tRNA synthetase [Enterococcus faecalis TX0855]
 gi|306514787|gb|EFM83337.1| seryl-tRNA synthetase [Enterococcus faecalis TX4248]
 gi|310625295|gb|EFQ08578.1| seryl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
 gi|310629116|gb|EFQ12399.1| seryl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|310633657|gb|EFQ16940.1| seryl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|311287682|gb|EFQ66238.1| seryl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
 gi|311291575|gb|EFQ70131.1| seryl-tRNA synthetase [Enterococcus faecalis TX0470]
 gi|315026612|gb|EFT38544.1| seryl-tRNA synthetase [Enterococcus faecalis TX2137]
 gi|315030106|gb|EFT42038.1| seryl-tRNA synthetase [Enterococcus faecalis TX4000]
 gi|315033599|gb|EFT45531.1| seryl-tRNA synthetase [Enterococcus faecalis TX0017]
 gi|315036264|gb|EFT48196.1| seryl-tRNA synthetase [Enterococcus faecalis TX0027]
 gi|315143579|gb|EFT87595.1| seryl-tRNA synthetase [Enterococcus faecalis TX2141]
 gi|315148283|gb|EFT92299.1| seryl-tRNA synthetase [Enterococcus faecalis TX4244]
 gi|315151248|gb|EFT95264.1| seryl-tRNA synthetase [Enterococcus faecalis TX0012]
 gi|315153733|gb|EFT97749.1| seryl-tRNA synthetase [Enterococcus faecalis TX0031]
 gi|315155041|gb|EFT99057.1| seryl-tRNA synthetase [Enterococcus faecalis TX0043]
 gi|315158670|gb|EFU02687.1| seryl-tRNA synthetase [Enterococcus faecalis TX0312]
 gi|315163393|gb|EFU07410.1| seryl-tRNA synthetase [Enterococcus faecalis TX0645]
 gi|315165668|gb|EFU09685.1| seryl-tRNA synthetase [Enterococcus faecalis TX1302]
 gi|315168475|gb|EFU12492.1| seryl-tRNA synthetase [Enterococcus faecalis TX1341]
 gi|315172092|gb|EFU16109.1| seryl-tRNA synthetase [Enterococcus faecalis TX1342]
 gi|315174225|gb|EFU18242.1| seryl-tRNA synthetase [Enterococcus faecalis TX1346]
 gi|315576187|gb|EFU88378.1| seryl-tRNA synthetase [Enterococcus faecalis TX0309B]
 gi|315579766|gb|EFU91957.1| seryl-tRNA synthetase [Enterococcus faecalis TX0630]
 gi|315582998|gb|EFU95189.1| seryl-tRNA synthetase [Enterococcus faecalis TX0309A]
 gi|323479199|gb|ADX78638.1| seryl-tRNA synthetase [Enterococcus faecalis 62]
 gi|327536390|gb|AEA95224.1| serine--tRNA ligase [Enterococcus faecalis OG1RF]
 gi|329577273|gb|EGG58736.1| serine--tRNA ligase [Enterococcus faecalis TX1467]
          Length = 423

 Score = 38.9 bits (89), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 33/173 (19%), Positives = 72/173 (41%), Gaps = 13/173 (7%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMR--RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMF 319
           GS  +++   G ++ + L ++M      +  Y E+ TP +++      +G +  ++ ++F
Sbjct: 160 GSRFVYYKGLGARLERALYNFMLDLHVYEHGYTEMITPYIVNDTAMFGTGQFPKFKEDVF 219

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS--- 376
            ++  D          L P         +N+ +   ++LP+        +R+E   +   
Sbjct: 220 QLQDTD--------LTLIPTAEVPLTNYYNNEILDGKDLPIYFTALSPSFRSEAGSAGRD 271

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
             GL+R+  F + +   F   E  + E  K+ N    I +  G    ++ LST
Sbjct: 272 TRGLIRLHQFNKVEMVKFSDAEHSYEELEKMTNNAEEILQKLGLPYRVMALST 324


>gi|120553897|ref|YP_958248.1| alanyl-tRNA synthetase [Marinobacter aquaeolei VT8]
 gi|205830137|sp|A1TZ92|SYA_MARAV RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|120323746|gb|ABM18061.1| alanyl-tRNA synthetase [Marinobacter aquaeolei VT8]
          Length = 876

 Score = 38.9 bits (89), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 33/129 (25%), Positives = 58/129 (44%), Gaps = 16/129 (12%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++  A+++I  E     G +++ D   +DF   +  + ++L +IE+ + E I  +
Sbjct: 562 HSATHLLHAALRNILGEHVTQKGSLVDPDKLRFDFSHFEAVTPEQLREIERTVNEQILEN 621

Query: 134 SPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           +P        + A+E     LF  +K    V +L     K +V         +LC G HV
Sbjct: 622 TPVDIDITDMDTAKEKGAMALF-GEKYGDVVRVLTMGTDKYSV---------ELCGGTHV 671

Query: 189 RSTGQVKKF 197
             TG +  F
Sbjct: 672 ARTGDIGLF 680


>gi|51595175|ref|YP_069366.1| alanyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
 gi|170025588|ref|YP_001722093.1| alanyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
 gi|186894190|ref|YP_001871302.1| alanyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
 gi|59798514|sp|Q66E68|SYA_YERPS RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|205830293|sp|B2K5X9|SYA_YERPB RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|205830296|sp|B1JJA0|SYA_YERPY RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|51588457|emb|CAH20065.1| alanyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
 gi|169752122|gb|ACA69640.1| alanyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
 gi|186697216|gb|ACC87845.1| alanyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
          Length = 875

 Score = 38.9 bits (89), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 32/155 (20%), Positives = 68/155 (43%), Gaps = 21/155 (13%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY-YDFDKEQPFSS 116
           S+E +     R+   + HS  H++  A++++  E     G ++ D +  +DF   +    
Sbjct: 547 SVEALVDVVRRNRIRLNHSATHLLHAALRNVLGEHVAQKGSLVNDKYLRFDFSHFEAMKP 606

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENV 171
           +++  +E  + E I R+ P   + +  + A+E     LF  K +             + V
Sbjct: 607 EQIRLVEDLVNEQIRRNMPVQTEVMELDAAKEKGAMALFGEKYD-------------DQV 653

Query: 172 TLYRQGEW-FDLCRGPHVRSTGQVKKFFKLMKVAG 205
            +   G++  +LC G H   TG +   F+++  +G
Sbjct: 654 RVLTMGDFSTELCGGTHASRTGDI-GLFRILTESG 687


>gi|319940232|ref|ZP_08014584.1| GTP pyrophosphokinase [Streptococcus anginosus 1_2_62CV]
 gi|319810534|gb|EFW06870.1| GTP pyrophosphokinase [Streptococcus anginosus 1_2_62CV]
          Length = 738

 Score = 38.9 bits (89), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 1/64 (1%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SI 59
           +  +I +  PDG++++ P  +   D A  I   + +KAV   +NG++  L+  ++ G  +
Sbjct: 390 LAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKAVGAKVNGRMVPLTTKLKTGDQV 449

Query: 60  EIIT 63
           EIIT
Sbjct: 450 EIIT 453


>gi|283851356|ref|ZP_06368638.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfovibrio sp. FW1012B]
 gi|283573306|gb|EFC21284.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfovibrio sp. FW1012B]
          Length = 738

 Score = 38.9 bits (89), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 1/60 (1%)

Query: 10  PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPR 68
           P G +K  P  AT  D+A  I  ++ +      +NG++  L  P++ G ++EIIT ++ R
Sbjct: 394 PKGEVKELPEGATAVDLAFLIHTAVGEHCAGAKVNGRLVPLETPLKNGDTVEIITDKNRR 453


>gi|20094336|ref|NP_614183.1| alanyl-tRNA synthetase [Methanopyrus kandleri AV19]
 gi|19887392|gb|AAM02113.1| Alanyl-tRNA synthetase [Methanopyrus kandleri AV19]
          Length = 918

 Score = 38.9 bits (89), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 30/123 (24%), Positives = 55/123 (44%), Gaps = 10/123 (8%)

Query: 75  HSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           H+  H++ EA + +  + V  A      D    D    +  S +EL +IE+   EI+ +D
Sbjct: 608 HTATHVILEAARRVLGDHVWQAGAHKSTDEARLDVTHHRRISDEELREIERLANEIVMKD 667

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILES--IPAKENVTLYRQGEWFDLCRGPHVRST 191
            P  K+++   +A       +  Y  E+ +   +P +E   +  +G     C G H  ST
Sbjct: 668 LPVNKRFMDRNEA-------ERRYGFELYQGGVVPGREIRVVEIEGWNVQACAGTHCDST 720

Query: 192 GQV 194
           G++
Sbjct: 721 GEI 723


>gi|71279113|ref|YP_267790.1| alanyl-tRNA synthetase [Colwellia psychrerythraea 34H]
 gi|83305842|sp|Q487H5|SYA_COLP3 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|71144853|gb|AAZ25326.1| alanyl-tRNA synthetase [Colwellia psychrerythraea 34H]
          Length = 876

 Score = 38.9 bits (89), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 15/142 (10%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKM 126
           R+  V  H+  H++ EA++ +  E     G + + D   +DF   +  ++ EL  +E+ +
Sbjct: 557 RAAIVKNHTATHLLHEALRKVLGEHVTQKGSLCDSDKLRFDFSHFEGVTAQELHDVEQMV 616

Query: 127 QEIIARDSPFLKQ--YLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLC 183
              I R+     +  Y+   KA+       E Y  E+         VTL   G++  +LC
Sbjct: 617 NNEIRRNHAKQTESMYIEEAKAKGAMALFGEKYDDEV-------RVVTL---GDFSIELC 666

Query: 184 RGPHVRSTGQVKKFFKLMKVAG 205
            G HV  TG +  F K++  +G
Sbjct: 667 GGVHVNRTGDI-GFLKIVSESG 687


>gi|153950576|ref|YP_001402195.1| alanyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
 gi|205830292|sp|A7FLR7|SYA_YERP3 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|152962071|gb|ABS49532.1| alanyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
          Length = 875

 Score = 38.9 bits (89), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 32/155 (20%), Positives = 68/155 (43%), Gaps = 21/155 (13%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY-YDFDKEQPFSS 116
           S+E +     R+   + HS  H++  A++++  E     G ++ D +  +DF   +    
Sbjct: 547 SVEALVDVVRRNRIRLNHSATHLLHAALRNVLGEHVAQKGSLVNDKYLRFDFSHFEAMKP 606

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENV 171
           +++  +E  + E I R+ P   + +  + A+E     LF  K +             + V
Sbjct: 607 EQIRLVEDLVNEQIRRNMPVQTEVMELDAAKEKGAMALFGEKYD-------------DQV 653

Query: 172 TLYRQGEW-FDLCRGPHVRSTGQVKKFFKLMKVAG 205
            +   G++  +LC G H   TG +   F+++  +G
Sbjct: 654 RVLTMGDFSTELCGGTHASRTGDI-GLFRILTESG 687


>gi|325845496|ref|ZP_08168787.1| proline--tRNA ligase [Turicibacter sp. HGF1]
 gi|325488515|gb|EGC90933.1| proline--tRNA ligase [Turicibacter sp. HGF1]
          Length = 476

 Score = 38.9 bits (89), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 57/250 (22%), Positives = 107/250 (42%), Gaps = 38/250 (15%)

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKG-------- 450
           Q +N+  K +N   S+ +   +EK     +TRP  R  ++ LW +   +           
Sbjct: 127 QSYNDLPKKYNQWCSVVR---WEK-----TTRPFLRT-TEFLWQEGHTVHATAEEAEEET 177

Query: 451 --VLDTIKNSSQDRINTGVLLGEGA----FYGPKFEYILKDAI--GRDWQCGTIQVDFNL 502
             +L+T     ++ +   VL G+      F G +  Y ++  +  G+  Q GT     N 
Sbjct: 178 LLMLNTYAKMCEEFLAIPVLKGQKTEKEKFAGAQATYTIESLMHDGKALQSGT---SHNF 234

Query: 503 PSRF-NAFYVNSHSEKCHPVMIHRAVFGSIERFIG--IMIENFKGNL--PLWLSPIQAIV 557
            + F  AF +    +       H+  +G   R IG  IM+      L  P  ++P Q ++
Sbjct: 235 GTGFAKAFDIKYSDKNSKMQYAHQTSWGVTTRLIGAIIMVHGDSSGLVLPPRVAPTQVMI 294

Query: 558 TTITS---SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE- 613
             I +     +E A E+   L S    ++ D  ++T  +K  E+ +K IP+ +  G K+ 
Sbjct: 295 IPIAAHKEGVIEKACELQTRLASV-ARVKCDTSDKTPGWKFSEYEMKGIPVRVEIGPKDI 353

Query: 614 ASERSIGIRR 623
            + +++ +RR
Sbjct: 354 ENNQAVLVRR 363


>gi|323348900|gb|EGA83137.1| YER087W-like protein [Saccharomyces cerevisiae Lalvin QA23]
          Length = 484

 Score = 38.9 bits (89), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 29/129 (22%), Positives = 60/129 (46%), Gaps = 13/129 (10%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E++   +  + LWQ +  W++  + +F +K +       + + L          +  + +
Sbjct: 9   EVSLSAISSKALWQATDRWNN--SELFKLKDSKG-----KQYCLTATCEEDITDLMKNYI 61

Query: 353 KSYRELPVRLAEFGSVYRNE--PSGSLHGLMRVRGFTQDDAHVFCTKEQ-MFNECLKIHN 409
            SY+++P+ + +    YR+E  P G   G++R R F   DA+ F + E+  F    K+ +
Sbjct: 62  ASYKDMPITIYQMTRKYRDEIRPRG---GILRGREFLMKDAYSFASNEEDAFASFQKLDD 118

Query: 410 LIISIYKDF 418
               I+KD 
Sbjct: 119 TYNKIFKDL 127


>gi|239816150|ref|YP_002945060.1| alanyl-tRNA synthetase [Variovorax paradoxus S110]
 gi|239802727|gb|ACS19794.1| alanyl-tRNA synthetase [Variovorax paradoxus S110]
          Length = 874

 Score = 38.9 bits (89), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 34/140 (24%), Positives = 63/140 (45%), Gaps = 11/140 (7%)

Query: 68  RSLAVIR-HSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           R  A +R HS  H+M +A++ +    VQ     +  D   +DF      + D++ +IEK+
Sbjct: 556 RRAATMRNHSVTHLMHKALREVLGAHVQQKGSLVDADKTRFDFAHNAAVTHDQILEIEKR 615

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           +      ++  L    +H +  ++  ++K    +   E     E+V +   G   +LC G
Sbjct: 616 V------NAEILANTETHARVMDMESAQKTGAMMLFGEKYG--ESVRVLDIGSSRELCGG 667

Query: 186 PHVRSTGQVKKFFKLMKVAG 205
            HV  TG +   FK++   G
Sbjct: 668 THVGRTGDI-GLFKIVSEGG 686


>gi|205830251|sp|A8F323|SYA_RICM5 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
          Length = 878

 Score = 38.9 bits (89), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 57/129 (44%), Gaps = 14/129 (10%)

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY-YDFDKEQPFSSDELAQIEKKMQEIIA 131
           I HS  HI+   +  +  +     G ++   +  +D    +  +++E+  IE K+ EII 
Sbjct: 565 IHHSATHILHAVLHEVLGKHVTQKGSLVAPTYLRFDISHSKAVTNEEITLIEDKVNEII- 623

Query: 132 RDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK--ENVTLYRQGEW-FDLCRGPHV 188
           RD+        HE     F + ++A K   +     K    V + + GE   +LC G HV
Sbjct: 624 RDN--------HE-VNTTFMATEDAVKQGAMALFGEKYDSEVRVVKMGETSLELCAGTHV 674

Query: 189 RSTGQVKKF 197
           R TG +  F
Sbjct: 675 RRTGDIGCF 683


>gi|166030431|ref|ZP_02233260.1| hypothetical protein DORFOR_00092 [Dorea formicigenerans ATCC
           27755]
 gi|166029789|gb|EDR48546.1| hypothetical protein DORFOR_00092 [Dorea formicigenerans ATCC
           27755]
          Length = 893

 Score = 38.9 bits (89), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 32/139 (23%), Positives = 63/139 (45%), Gaps = 10/139 (7%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAV-QSIWPEVQVAIGPIIEDGFYYDFDKEQPFSS 116
           ++ +   ++ R+L+   HS  H++  A+ Q +   V+ A   +  +   +DF      S 
Sbjct: 564 TVSMEVDKENRNLSARNHSATHLLQAALRQVLGTHVEQAGSYVDAERLRFDFTHFSALSK 623

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
           +EL Q+E  + E IA   P + + +  E+AR+   +     K          + V +   
Sbjct: 624 EELKQVENIVNEKIAECLPVVAKNMPIEEARKTGAAALFGEKY--------GDVVRVVSM 675

Query: 177 GEW-FDLCRGPHVRSTGQV 194
           G++  + C G HV +TG +
Sbjct: 676 GDFSVEFCGGTHVSNTGVI 694


>gi|317471795|ref|ZP_07931133.1| alanyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
 gi|316900721|gb|EFV22697.1| alanyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
          Length = 879

 Score = 38.9 bits (89), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 33/138 (23%), Positives = 63/138 (45%), Gaps = 21/138 (15%)

Query: 75  HSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++ +A++++    V+ A          +DF    P +S+E+ ++E  + E IA +
Sbjct: 566 HSATHLLQKALRTVLGSHVEQAGSSNNAKHLRFDFTHFSPMTSEEIKKVEDIVNEEIAAN 625

Query: 134 SPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPH 187
            P   + +S ++A+      LF  K               + V +   G++  +LC G H
Sbjct: 626 RPVETKLMSMDEAKNTGAMALFGEK-------------YGDEVRVVSMGDFSVELCGGTH 672

Query: 188 VRSTGQVKKFFKLMKVAG 205
           V +TG +   FK++   G
Sbjct: 673 VANTGSI-TVFKILSETG 689


>gi|261880409|ref|ZP_06006836.1| alpha-amylase [Prevotella bergensis DSM 17361]
 gi|270332878|gb|EFA43664.1| alpha-amylase [Prevotella bergensis DSM 17361]
          Length = 716

 Score = 38.9 bits (89), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 52/121 (42%), Gaps = 37/121 (30%)

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIP--AKENVTLYRQGE 178
           +IE++M E+I  D P   +Y   +   E F+  +          +P    + + L R G+
Sbjct: 625 EIEEQMNELIKADLPVTYEYFDKDNLPEEFDPDR----------LPENCSQTIQLVRIGD 674

Query: 179 WFDLCR--GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
            FDLC   G HVRST Q+ +F                      + GT WN Q++LT  + 
Sbjct: 675 -FDLCPCIGKHVRSTSQIGRF---------------------ELLGTNWN-QEKLTYRIR 711

Query: 237 F 237
           F
Sbjct: 712 F 712


>gi|253568623|ref|ZP_04846034.1| alanyl-tRNA synthetase [Bacteroides sp. 1_1_6]
 gi|251842696|gb|EES70776.1| alanyl-tRNA synthetase [Bacteroides sp. 1_1_6]
          Length = 158

 Score = 38.9 bits (89), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 24/83 (28%), Positives = 45/83 (54%), Gaps = 13/83 (15%)

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIP--AKENVTLYR 175
           E+  IE K+ EII+++ P   ++++HE+A+++ +          L  +P  A E + + R
Sbjct: 62  EIQTIEDKVNEIISQNLPVTVEFMTHEQAKDIVD----------LSKLPADASETLRIIR 111

Query: 176 QGEWFDL-CRGPHVRSTGQVKKF 197
            G++    C G HV +T +V  F
Sbjct: 112 IGDYDACACIGLHVSNTSEVGTF 134


>gi|255587004|ref|XP_002534095.1| alanyl-tRNA synthetase, putative [Ricinus communis]
 gi|223525858|gb|EEF28289.1| alanyl-tRNA synthetase, putative [Ricinus communis]
          Length = 815

 Score = 38.9 bits (89), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 36/156 (23%), Positives = 69/156 (44%), Gaps = 24/156 (15%)

Query: 54  VREGSIEII----TPEDP--RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYY 106
           +REG +E+        DP  R  A + H+  H++  A++ +  +     G ++  D   +
Sbjct: 466 IREGLLEVGREVEAAVDPKLRQRAKVHHTATHLLQSALKKVIGQETSQAGSLVAFDRLRF 525

Query: 107 DFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEI 161
           DF+  +P    EL +IE  +   I   +    + +S   A+      +F  +K   +V +
Sbjct: 526 DFNFHRPLLDTELEEIEALINGWIGDATLLQTKVMSITDAKNAGAIAMF-GEKYGEQVRV 584

Query: 162 LESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
           +E +P          G   +LC G HV +T +++ F
Sbjct: 585 VE-VP----------GVSMELCGGTHVSNTSEIRAF 609


>gi|157965032|ref|YP_001499856.1| alanyl-tRNA synthetase [Rickettsia massiliae MTU5]
 gi|157844808|gb|ABV85309.1| Alanyl-tRNA synthetase [Rickettsia massiliae MTU5]
          Length = 883

 Score = 38.9 bits (89), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 57/129 (44%), Gaps = 14/129 (10%)

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY-YDFDKEQPFSSDELAQIEKKMQEIIA 131
           I HS  HI+   +  +  +     G ++   +  +D    +  +++E+  IE K+ EII 
Sbjct: 570 IHHSATHILHAVLHEVLGKHVTQKGSLVAPTYLRFDISHSKAVTNEEITLIEDKVNEII- 628

Query: 132 RDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK--ENVTLYRQGEW-FDLCRGPHV 188
           RD+        HE     F + ++A K   +     K    V + + GE   +LC G HV
Sbjct: 629 RDN--------HE-VNTTFMATEDAVKQGAMALFGEKYDSEVRVVKMGETSLELCAGTHV 679

Query: 189 RSTGQVKKF 197
           R TG +  F
Sbjct: 680 RRTGDIGCF 688


>gi|153813731|ref|ZP_01966399.1| hypothetical protein RUMOBE_04164 [Ruminococcus obeum ATCC 29174]
 gi|149830171|gb|EDM85264.1| hypothetical protein RUMOBE_04164 [Ruminococcus obeum ATCC 29174]
          Length = 556

 Score = 38.9 bits (89), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 39/198 (19%), Positives = 85/198 (42%), Gaps = 7/198 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAI-NGKVCDLSDPVR-EGSIEII 62
           +K+T  DG    + +  T  ++ +     +A+  V + + +GK+ +L   ++ + ++E +
Sbjct: 6   VKVTI-DGKEHEYAIGTTYREIVDEYQEEVAEAPVILVMADGKLRELQKKLKGDCTLEFV 64

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEV---QVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           T +D       + +   ++  A+  +  +    +V I   + +G+Y+    +       L
Sbjct: 65  TTKDHIGFETYKRTVCLVLLRAIYDVAGKENIEKVMIHYSVGNGYYFTMAGKAVLDQHFL 124

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             ++ +MQE+    +P  K+ ++ + A  LF   +  Y  E L        V +Y  G +
Sbjct: 125 DNVKTRMQELADMCTPIGKRSVNTDDAVSLFHHHR-MYDKEKLFRFRRVSKVNIYNIGYY 183

Query: 180 FDLCRGPHVRSTGQVKKF 197
            D   G      G VK F
Sbjct: 184 EDYFYGYMADHAGYVKYF 201


>gi|20807697|ref|NP_622868.1| alanyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
 gi|22096187|sp|Q8RAH4|SYA_THETN RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|20516247|gb|AAM24472.1| Alanyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
          Length = 878

 Score = 38.9 bits (89), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 45/203 (22%), Positives = 91/203 (44%), Gaps = 34/203 (16%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKM 126
           R  A   H+  H++ +A++ +  +     G ++  D   +DF   Q  S +EL +IE+++
Sbjct: 557 RKGAARNHTATHLLHKALKEVLGDHVNQSGSLVAYDRLRFDFSHYQAVSKEELKKIEERV 616

Query: 127 QEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
            E I    P + +  ++E A +     LF ++K   KV +++       +  Y      +
Sbjct: 617 NEKIYEQLPVVVEEKNYEDALKEGAVALF-TEKYGDKVRVVK-------IDDYS----ME 664

Query: 182 LCRGPHVRSTGQVKKFFKLM--KVAGAYWRG-------------DSNRPMLSRIYGTAWN 226
           LC G HV++T ++   FK++     GA  R              +  + +L R+  T   
Sbjct: 665 LCGGTHVKNTSEI-GIFKIVSESAVGAGLRRIEALTGIEAIKYLNEQKEILDRVSETLKA 723

Query: 227 TQQELTQYLYFLEESEKRDHRKL 249
            ++E+   +  L++S K   R++
Sbjct: 724 QEKEVVSKIENLQQSLKDKEREI 746


>gi|212709394|ref|ZP_03317522.1| hypothetical protein PROVALCAL_00430 [Providencia alcalifaciens DSM
           30120]
 gi|212688306|gb|EEB47834.1| hypothetical protein PROVALCAL_00430 [Providencia alcalifaciens DSM
           30120]
          Length = 875

 Score = 38.9 bits (89), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 33/146 (22%), Positives = 60/146 (41%), Gaps = 20/146 (13%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY-YDFDKEQPFSSD 117
           I  I   + R+   + HS  H++  A++ +  E     G ++ D +  +DF   +  +  
Sbjct: 548 IAAIVNSERRNAIRLNHSATHLLHAALRQVLGEHVSQKGSLVNDKYLRFDFSHFEAMTQQ 607

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKAR-----ELFESKKEAYKVEILESIPAKENVT 172
           +L Q+E  +   I ++S    + +  E A+      LF  K E             E V 
Sbjct: 608 QLRQVEDIVNAQIRQNSEIETELMDLEGAKAKGAMALFGEKYE-------------ERVR 654

Query: 173 LYRQGEW-FDLCRGPHVRSTGQVKKF 197
           +   G++  +LC G H   TG +  F
Sbjct: 655 VLSMGDFSIELCGGTHASRTGDIGLF 680


>gi|329960573|ref|ZP_08298940.1| threonine/alanine tRNA ligase second additional domain protein
           [Bacteroides fluxus YIT 12057]
 gi|328532637|gb|EGF59427.1| threonine/alanine tRNA ligase second additional domain protein
           [Bacteroides fluxus YIT 12057]
          Length = 155

 Score = 38.9 bits (89), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 27/103 (26%), Positives = 52/103 (50%), Gaps = 17/103 (16%)

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIP--AKENVT 172
           +  E+ Q+E+ +  +IA+  P   ++++ E+A+  F+          LE +P  A E V 
Sbjct: 59  TEKEVKQLEETVNAVIAQHLPVTTEFITQEEAKGRFD----------LERLPEDASETVR 108

Query: 173 LYRQGEWFD-LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNR 214
           + + GE+ + LC G HV +T ++  F    K+    W  ++ R
Sbjct: 109 IVKVGEYDECLCIGTHVANTSEIGIF----KIISHDWDEENKR 147


>gi|323305259|gb|EGA59006.1| YER087W-like protein [Saccharomyces cerevisiae FostersB]
          Length = 509

 Score = 38.9 bits (89), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 29/129 (22%), Positives = 60/129 (46%), Gaps = 13/129 (10%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E++   +  + LWQ +  W++  + +F +K +       + + L          +  + +
Sbjct: 9   EVSLSAISSKALWQATDRWNN--SELFKLKDSKG-----KQYCLTATCEEDITDLMKNYI 61

Query: 353 KSYRELPVRLAEFGSVYRNE--PSGSLHGLMRVRGFTQDDAHVFCTKEQ-MFNECLKIHN 409
            SY+++P+ + +    YR+E  P G   G++R R F   DA+ F + E+  F    K+ +
Sbjct: 62  ASYKDMPITIYQMTRKYRDEIRPRG---GILRGREFLMKDAYSFASNEEDAFASFQKLDD 118

Query: 410 LIISIYKDF 418
               I+KD 
Sbjct: 119 TYNKIFKDL 127


>gi|319408736|emb|CBI82393.1| Alanyl-tRNA synthetase [Bartonella schoenbuchensis R1]
          Length = 889

 Score = 38.9 bits (89), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 37/156 (23%), Positives = 65/156 (41%), Gaps = 12/156 (7%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  HI+ +A++    +  V  G  +  D   +DF         +L +IE    EI+ ++
Sbjct: 564 HSATHILHKALRQTLGDHVVQKGSFVSPDRLRFDFSHSGQILLKDLKKIEDLANEIVLQN 623

Query: 134 SPFLKQYLS-----HEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPH 187
           S  + + ++      E A  LF    E Y  E+      K +  +  +  W  +LC G H
Sbjct: 624 SEVITRLMTVDDAISEGAIALF---GEKYSDEVRVVSMGKRHEEIGEKDYWSIELCGGTH 680

Query: 188 VRSTGQVK--KFFKLMKVAGAYWRGDSNRPMLSRIY 221
           V  TG++       +  VA    R ++     +R+Y
Sbjct: 681 VHRTGEIGLIHIVSVSSVAAGVRRIEALTGTAARLY 716


>gi|257470206|ref|ZP_05634297.1| hypothetical protein FulcA4_12762 [Fusobacterium ulcerans ATCC
           49185]
 gi|317064421|ref|ZP_07928906.1| fision threonyl-tRNA synthetase and uridine kinase [Fusobacterium
           ulcerans ATCC 49185]
 gi|313690097|gb|EFS26932.1| fision threonyl-tRNA synthetase and uridine kinase [Fusobacterium
           ulcerans ATCC 49185]
          Length = 487

 Score = 38.9 bits (89), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 3/71 (4%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           DP+  AV   +   I  +AV   +P+++V I   + +G Y    + +  + + + +I+KK
Sbjct: 5   DPKKYAV---TLKLIFLKAVYETFPDIEVEIDHSLNNGTYGTVTRGEKITEEGIKKIDKK 61

Query: 126 MQEIIARDSPF 136
           MQEII +  P 
Sbjct: 62  MQEIIEKGYPI 72


>gi|189499310|ref|YP_001958780.1| alanyl-tRNA synthetase [Chlorobium phaeobacteroides BS1]
 gi|189494751|gb|ACE03299.1| alanyl-tRNA synthetase [Chlorobium phaeobacteroides BS1]
          Length = 886

 Score = 38.9 bits (89), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 58/133 (43%), Gaps = 18/133 (13%)

Query: 75  HSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           H+  H++  A++ +  E VQ     +  D   +DF   +  S+ EL  +E ++ E I   
Sbjct: 569 HTATHLLHAALRKVLGEHVQQKGSLVGPDRLRFDFSHFEKVSAGELEAVEAEVNERIREA 628

Query: 134 SPFLKQY-----LSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
              +K        + EK    F   K A +V ++E +P          G   +LC G HV
Sbjct: 629 GALVKHADIPYEAALEKGALAFFGDKYADRVRVVE-VP----------GVSMELCGGTHV 677

Query: 189 RSTGQVKKFFKLM 201
            + GQ+   FK+M
Sbjct: 678 SNVGQI-GLFKIM 689


>gi|323337977|gb|EGA79216.1| YER087W-like protein [Saccharomyces cerevisiae Vin13]
 gi|323355284|gb|EGA87109.1| YER087W-like protein [Saccharomyces cerevisiae VL3]
          Length = 509

 Score = 38.9 bits (89), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 29/129 (22%), Positives = 60/129 (46%), Gaps = 13/129 (10%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E++   +  + LWQ +  W++  + +F +K +       + + L          +  + +
Sbjct: 9   EVSLSAISSKALWQATDRWNN--SELFKLKDSKG-----KQYCLTATCEEDITDLMKNYI 61

Query: 353 KSYRELPVRLAEFGSVYRNE--PSGSLHGLMRVRGFTQDDAHVFCTKEQ-MFNECLKIHN 409
            SY+++P+ + +    YR+E  P G   G++R R F   DA+ F + E+  F    K+ +
Sbjct: 62  ASYKDMPITIYQMTRKYRDEIRPRG---GILRGREFLMKDAYSFASNEEDAFASFQKLDD 118

Query: 410 LIISIYKDF 418
               I+KD 
Sbjct: 119 TYNKIFKDL 127


>gi|227894178|ref|ZP_04011983.1| seryl-tRNA synthetase [Lactobacillus ultunensis DSM 16047]
 gi|227864019|gb|EEJ71440.1| seryl-tRNA synthetase [Lactobacillus ultunensis DSM 16047]
          Length = 435

 Score = 38.9 bits (89), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 30/151 (19%), Positives = 65/151 (43%), Gaps = 4/151 (2%)

Query: 282 YMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           ++    K+ Y E+  P +++    Q +G +  +  +++ +   DD  K  R   L P   
Sbjct: 181 FLDENTKEGYTEVIPPYLVNDASMQGTGQFPKFHEDVYTIVDNDDPDKP-RDLTLIPTAE 239

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKE 398
              V  F + +    +LP+ +      +R+E   +     GL+R+  F + +    C  +
Sbjct: 240 VPLVNYFRNEIIHGSKLPINVTALSPAFRSEAGSAGRDTRGLIRMHEFRKVEMVKVCKPD 299

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
           + ++E  K+ +    + +  G    +V LST
Sbjct: 300 ESWDELEKLTHNAEHLLQKLGLPYHVVALST 330


>gi|222100169|ref|YP_002534737.1| Alanyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
 gi|221572559|gb|ACM23371.1| Alanyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
          Length = 864

 Score = 38.9 bits (89), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 32/129 (24%), Positives = 58/129 (44%), Gaps = 18/129 (13%)

Query: 75  HSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           H+  H++  A++ +  E V+ A   +  +   +DF   +  S++E+ ++E  + E I + 
Sbjct: 562 HTATHLLHAALRKVLGEHVRQAGSLVAPERLRFDFTHYRALSAEEIKKVEDMVNEWIMQA 621

Query: 134 SPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
            P   +Y S+E+A       LF  K       +     +KE            LC G HV
Sbjct: 622 IPVEVRYTSYEEAIRSGVIALFTEKYGDVVRVVEVPGVSKE------------LCGGTHV 669

Query: 189 RSTGQVKKF 197
           ++TGQ+  F
Sbjct: 670 KNTGQIGLF 678


>gi|125555413|gb|EAZ01019.1| hypothetical protein OsI_23053 [Oryza sativa Indica Group]
          Length = 409

 Score = 38.9 bits (89), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 38/164 (23%), Positives = 73/164 (44%), Gaps = 15/164 (9%)

Query: 244 RDHRKLAREMDLFHI--AEDGSGVIFWHRKGWKIF--QTLISYMRRKI-KDDYEEINTPQ 298
           RDH +L +E+DLF    A + SG  F++ K   +     L+++   ++ K  +  + TP+
Sbjct: 105 RDHLQLGKELDLFDFDAAAEVSGSKFYYLKNEAVLLEMALVNWAITEVSKKGFTPLITPE 164

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++   + ++ G     RA    V   D++ + L   A  P+       +    +    +L
Sbjct: 165 IVRSSVVEKCGFQP--RAQNTQVYSIDNSDQCLIGTAEIPVG-----GIHMDSILPDSDL 217

Query: 359 PVRLAEFGSVYRNE---PSGSLHGLMRVRGFTQDDAHVFCTKEQ 399
           P +   +   +R E      +  GL RV  F++ +  VFC  E+
Sbjct: 218 PRKYVAYSHCFRTEAGAAGAATRGLYRVHQFSKVEMFVFCRPEE 261


>gi|54294686|ref|YP_127101.1| alanyl-tRNA synthetase [Legionella pneumophila str. Lens]
 gi|59798486|sp|Q5WVQ2|SYA_LEGPL RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|53754518|emb|CAH16002.1| alanyl-tRNA synthetase [Legionella pneumophila str. Lens]
          Length = 860

 Score = 38.9 bits (89), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 35/161 (21%), Positives = 70/161 (43%), Gaps = 16/161 (9%)

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIA 131
           + H+  H++  A++ I  +     G +++ +   +DF   +P +  ++ QIE+ +   I 
Sbjct: 551 LNHTATHLLHAALKQIVGQHVQQRGSLVDAERARFDFSHFEPLTPQQIQQIEEVVNAQIR 610

Query: 132 RDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF-DLCRGPHVRS 190
            ++  + Q +         ES K++  V +       + V +   G++  +LC G H R 
Sbjct: 611 ANNEVITQVMD-------IESAKQSGAVALFGE-KYSDAVRVLSMGDFSKELCGGTHARR 662

Query: 191 TGQVKKFFKLMKVAGAYWRGDSNR--PMLSRIYGTAWNTQQ 229
           TG +     L K+   Y      R   M++  Y  AW  +Q
Sbjct: 663 TGDI----GLFKIVAEYGIASGIRRVEMVTGRYALAWVNEQ 699


>gi|259909418|ref|YP_002649774.1| Alanyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
 gi|224965040|emb|CAX56571.1| Alanyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
 gi|283479495|emb|CAY75411.1| alaS [Erwinia pyrifoliae DSM 12163]
          Length = 876

 Score = 38.9 bits (89), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 38/174 (21%), Positives = 74/174 (42%), Gaps = 13/174 (7%)

Query: 27  AESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSCAHIMAEAV 85
           A  I  +  K A A+  +GK+   +  +R G  +     E  R+   + HS  H++  A+
Sbjct: 517 ASLIVSNTQKYAQAIGHSGKLA--TGELRVGERVAAQVDEARRARIRLNHSATHLLHAAL 574

Query: 86  QSIWPEVQVAIGPIIEDGFY-YDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHE 144
           + +  +     G ++ D +  +DF   +  +  E+ Q+E+ +   I R+ P     +  E
Sbjct: 575 RQVLGQHVSQKGSLVNDKYLRFDFSHFEAMTQQEIRQVEEIVNAQIRRNLPIETNIMELE 634

Query: 145 KARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
            A+        A+    L      ++V +   G++  +LC G H   TG +  F
Sbjct: 635 AAK--------AHGAMALFGEKYDDHVRVLSMGDFSTELCGGTHATRTGDIGLF 680


>gi|197336333|ref|YP_002155293.1| alanyl-tRNA synthetase [Vibrio fischeri MJ11]
 gi|197317823|gb|ACH67270.1| alanyl-tRNA synthetase [Vibrio fischeri MJ11]
          Length = 859

 Score = 38.9 bits (89), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 33/148 (22%), Positives = 64/148 (43%), Gaps = 21/148 (14%)

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIE 123
           E  R+  ++ HS  H++  A++ +  E     G +++ +   +DF   +   ++EL Q+E
Sbjct: 552 ETRRAAIILNHSATHLLHAALRQVLGEHVTQKGSLVKAENLRFDFSHLEAVKAEELRQVE 611

Query: 124 KKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGE 178
           + + + I  +       +  + A+E     LF  K +             + V +   GE
Sbjct: 612 RIVNQQIRLNHTIETDLMDIDAAKEKGAMALFGEKYD-------------DEVRVLSMGE 658

Query: 179 W-FDLCRGPHVRSTGQVKKFFKLMKVAG 205
           +  +LC G H  STG +   FK+    G
Sbjct: 659 FSTELCGGIHASSTGDI-GLFKITSEGG 685


>gi|297155787|gb|ADI05499.1| alanyl-tRNA synthetase [Streptomyces bingchenggensis BCW-1]
          Length = 889

 Score = 38.9 bits (89), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 47/191 (24%), Positives = 79/191 (41%), Gaps = 29/191 (15%)

Query: 68  RSLAVIR-HSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSDELAQIEKK 125
           R  A+ R HS  H+  +A++          G     G F +DF          L  +E+K
Sbjct: 565 RRRAIARAHSATHLTHQALRDALGPTAAQAGSENSPGRFRFDFGSPAAVPGAVLTDVEQK 624

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF-DLCR 184
           + E+++R+     + +S E      E+KK+    E  E     + V +   G++  +LC 
Sbjct: 625 INEVLSRELDVTAEVMSME------EAKKQGAIAEFGEKY--GDRVRVVTIGDFSKELCG 676

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           G HV +T Q      L+K+ G    G   R + + +   A+N          FL     R
Sbjct: 677 GTHVHNTAQ----LGLVKLLGESSIGSGVRRVEALVGVDAYN----------FL----AR 718

Query: 245 DHRKLAREMDL 255
           +H  ++R  DL
Sbjct: 719 EHTVVSRLTDL 729


>gi|67523387|ref|XP_659754.1| hypothetical protein AN2150.2 [Aspergillus nidulans FGSC A4]
 gi|40745038|gb|EAA64194.1| hypothetical protein AN2150.2 [Aspergillus nidulans FGSC A4]
 gi|259487529|tpe|CBF86275.1| TPA: prolyl-tRNA synthetase (AFU_orthologue; AFUA_2G16010)
           [Aspergillus nidulans FGSC A4]
          Length = 594

 Score = 38.9 bits (89), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 78/405 (19%), Positives = 151/405 (37%), Gaps = 59/405 (14%)

Query: 261 DGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANM 318
           D SG        + I++ +  +  ++IK    +  + P  + + + Q +  H + + A +
Sbjct: 108 DVSGCYILKPASYSIWEEIQQWFNQRIKKIGVKNCSFPLFVSEDVLQREKDHIEGFAAEV 167

Query: 319 FAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLH 378
             V  A  T  + +  A++P +       +   ++S+R+LP++L ++ SV R E      
Sbjct: 168 AWVTHAGSTPLE-KKIAIRPTSETVMYPYYAKWIRSHRDLPLKLNQWNSVVRWE-FKHPQ 225

Query: 379 GLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGS 437
             +R R F   + H    TKE    E + I +L   IY++     ++    T  EK  G 
Sbjct: 226 PFLRTREFLWQEGHTAHLTKEAAHEEVMYILDLYAQIYEELLAVPVVKGQKTEKEKFAG- 284

Query: 438 DALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ 497
                    +    ++    ++   I  G   G G  +   F   ++D   +        
Sbjct: 285 --------GLYTTTVEGYIPATGRGIQGGTSHGLGQNFSKMFNITVEDPSAKG------- 329

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP----- 552
                             EK  P+ + +  +G   R +G+M+     +  L L P     
Sbjct: 330 -----------------DEKKPPLHVWQNSWGLSTRTLGVMVMIHSDDNGLVLPPRVAEN 372

Query: 553 -IQAIVTTITSSAVE------YAQ--EIANLLKSHHLSIETDFRNE-TINYKIREHSIKK 602
            +  +   IT+   E      YA+  +I   L +  +   +D R   +  +K  E  ++ 
Sbjct: 373 QVVVVPVGITAKLTEEDRAKLYAEVDKITETLTAAGVRAISDKREGYSPGWKFNEWELRG 432

Query: 603 IPIIIICGDKEASERSIGIRRF------GSTTTQKVSLLDAIPIL 641
           +P+ I  G  E++   +   R       G  T     L  A+P L
Sbjct: 433 VPLRIEFGPGESAGNFVSTARRDIPGKDGKGTIPIPELSTAVPAL 477


>gi|331002004|ref|ZP_08325524.1| hypothetical protein HMPREF0491_00386 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330411800|gb|EGG91205.1| hypothetical protein HMPREF0491_00386 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 762

 Score = 38.9 bits (89), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 1/60 (1%)

Query: 10  PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPEDPR 68
           P+G +KN P  +   D A SI  ++  K V   +NG++ ++   +  G  +EIIT ++ +
Sbjct: 424 PNGDVKNLPAGSNPIDFAYSIHSAVGNKMVGARVNGRLVNIDFELTSGDRVEIITSQNSK 483


>gi|224538063|ref|ZP_03678602.1| hypothetical protein BACCELL_02953 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224520311|gb|EEF89416.1| hypothetical protein BACCELL_02953 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 872

 Score = 38.9 bits (89), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 33/132 (25%), Positives = 58/132 (43%), Gaps = 12/132 (9%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEK 124
           D R+     HS  H++  A++ +  E     G ++  D   +DF   Q  + +E+ Q+E 
Sbjct: 554 DKRAACAANHSATHLLDSALREVLGEHVEQKGSLVTPDSLRFDFSHFQKVTDEEIRQVEH 613

Query: 125 KMQEIIARDSPFLKQY--LSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
            +   I  + P LK+Y  +  E A+EL        K          ++V + + G   + 
Sbjct: 614 LVNAKIRANIP-LKEYRNIPIEDAKELGAIALFGEKY--------GDHVRVIQFGSSVEF 664

Query: 183 CRGPHVRSTGQV 194
           C G HV +TG +
Sbjct: 665 CGGTHVAATGNI 676


>gi|118430888|ref|NP_146977.2| misacylated tRNAthr hydrolase [Aeropyrum pernix K1]
 gi|150421685|sp|Q9YFY3|SYT2_AERPE RecName: Full=Probable threonyl-tRNA synthetase 2; AltName:
           Full=Threonine--tRNA ligase 2; Short=ThrRS 2
 gi|116062213|dbj|BAA79028.2| misacylated tRNAthr hydrolase [Aeropyrum pernix K1]
          Length = 421

 Score = 38.9 bits (89), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 23/89 (25%), Positives = 43/89 (48%), Gaps = 1/89 (1%)

Query: 550 LSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIIC 609
           L+P+Q+ V  + S +  YAQ IA  L +  + +    R   +  ++RE       ++I+ 
Sbjct: 314 LTPVQSAVIPVDSESEGYAQRIAEDLAASGVRVSI-VRGSGLGRRVREAGRSWASLVIVV 372

Query: 610 GDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           G +E    ++ +RR      Q+V  LD +
Sbjct: 373 GKREEETGTVVVRRRWEPGKQEVLTLDEL 401


>gi|91772920|ref|YP_565612.1| glycyl-tRNA synthetase [Methanococcoides burtonii DSM 6242]
 gi|91711935|gb|ABE51862.1| Glycyl-tRNA synthetase [Methanococcoides burtonii DSM 6242]
          Length = 581

 Score = 38.9 bits (89), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 3/100 (3%)

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRE-LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
           R   ++P    G    F    + YR+ LP    + G  YRNE S    G++R+R FTQ +
Sbjct: 154 RQGYMRPETAQGMFINFQRLSRYYRDKLPFGATQIGKSYRNEIS-PRQGVIRLREFTQAE 212

Query: 391 AHVFC-TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
           A +F   KE+      +   + +++Y D   EK  ++  T
Sbjct: 213 AEIFTHPKEKGHPNFERFAEVTLNLYSDEAQEKGAIEQMT 252


>gi|323484372|ref|ZP_08089739.1| hypothetical protein HMPREF9474_01490 [Clostridium symbiosum
           WAL-14163]
 gi|323692384|ref|ZP_08106620.1| phosphoribulokinase/uridine kinase [Clostridium symbiosum
           WAL-14673]
 gi|323402366|gb|EGA94697.1| hypothetical protein HMPREF9474_01490 [Clostridium symbiosum
           WAL-14163]
 gi|323503524|gb|EGB19350.1| phosphoribulokinase/uridine kinase [Clostridium symbiosum
           WAL-14673]
          Length = 551

 Score = 38.9 bits (89), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 42/184 (22%), Positives = 79/184 (42%), Gaps = 9/184 (4%)

Query: 18  PVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIRHS 76
           P      D  E I   +    + V+ +GK+ +L   ++E   + +IT  D       + S
Sbjct: 18  PFQEIVKDYQEGIENDI----LLVSADGKLKELHKTLKEDCELRLITAADRAGFLSYQRS 73

Query: 77  CAHIMAEAVQSIWPEVQVAIGPI---IEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
              +M +A   I  +  V+   +   + +G Y + +     + + L +++ +M  +++ D
Sbjct: 74  ALFLMLKAFYDIAGKDNVSKLTVCFSMGNGLYIEPEGALALTRELLDRVKTEMIRLVSLD 133

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQ 193
            P LK+  + ++A ELF      Y  E L        V +Y    + D   G  V+STG 
Sbjct: 134 LPILKRSENTDEAVELFHLHG-MYDKEKLFYYRRASRVNIYSIENFEDYFYGYMVKSTGY 192

Query: 194 VKKF 197
           +K F
Sbjct: 193 IKYF 196


>gi|289616456|emb|CBI56771.1| unnamed protein product [Sordaria macrospora]
          Length = 542

 Score = 38.9 bits (89), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 31/129 (24%), Positives = 56/129 (43%), Gaps = 7/129 (5%)

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW++SG   +    +F  +  D   +    + L P +      +    ++SY++LP+R
Sbjct: 83  EALWERSGRLQNIAPELF--RFLD---RKGGAYLLSPTHEEEITNLVAQTVRSYKDLPLR 137

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGF 420
           L +    +R+E     HGL+R R FT  D + F T      +   K+      I+ D   
Sbjct: 138 LYQITRKFRDELR-PRHGLLRGREFTMKDLYTFDTDLRSALDTYEKVRGAYSRIFNDMKL 196

Query: 421 EKIMVKLST 429
             +  K S+
Sbjct: 197 PVLAAKASS 205


>gi|242373930|ref|ZP_04819504.1| histidyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
 gi|242348484|gb|EES40086.1| histidyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
          Length = 430

 Score = 38.9 bits (89), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 21/84 (25%), Positives = 39/84 (46%)

Query: 551 SPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           S     + T+   A  YA ++ N L+ + +  + D+ N  I  ++++         I+ G
Sbjct: 338 SKFDLFIVTMGEEADRYAVKLLNELRKNGVKADKDYLNRKIKGQMKQADRLNAKYTIVIG 397

Query: 611 DKEASERSIGIRRFGSTTTQKVSL 634
           D+E    SI I+   S  ++KV L
Sbjct: 398 DQELENNSIDIKHMASGESEKVQL 421


>gi|71893734|ref|YP_279180.1| prolyl-tRNA synthetase [Mycoplasma hyopneumoniae J]
 gi|114152216|sp|Q4A9V2|SYP_MYCHJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|71851861|gb|AAZ44469.1| prolyl-tRNA synthetase [Mycoplasma hyopneumoniae J]
          Length = 479

 Score = 38.9 bits (89), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 11/131 (8%)

Query: 501 NLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG--IMIENFKGNL--PLWLSPIQAI 556
           N    F  FY N  ++   P    +  +G   R IG  +M+ +    L  P  ++PIQ  
Sbjct: 235 NFAKNFEIFYKNKENKSQIPF---QTSWGLSTRLIGAIVMVHSDDNGLIFPPKIAPIQVD 291

Query: 557 VTTITSSAVE----YAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
           +    S   +    +A++IA +LK+  +S + D  ++ I YKI    +   PI I  G  
Sbjct: 292 ILEFFSKKNQEVKIFAKKIAKILKNAKISYKIDDTDQQIGYKINNSEVHGAPIRIEIGPN 351

Query: 613 EASERSIGIRR 623
           E     I + R
Sbjct: 352 EVKNNQICLVR 362


>gi|54020489|ref|YP_115908.1| prolyl-tRNA synthetase [Mycoplasma hyopneumoniae 232]
 gi|81823524|sp|Q600Q7|SYP_MYCH2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|53987662|gb|AAV27863.1| prolyl aminoacyl-tRNA synthetase [Mycoplasma hyopneumoniae 232]
          Length = 479

 Score = 38.9 bits (89), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 11/131 (8%)

Query: 501 NLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG--IMIENFKGNL--PLWLSPIQAI 556
           N    F  FY N  ++   P    +  +G   R IG  +M+ +    L  P  ++PIQ  
Sbjct: 235 NFAKNFEIFYKNKENKSQIPF---QTSWGLSTRLIGAIVMVHSDDNGLIFPPKIAPIQVD 291

Query: 557 VTTITSSAVE----YAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
           +    S   +    +A++IA +LK+  +S + D  ++ I YKI    +   PI I  G  
Sbjct: 292 ILEFFSKKNQEVKIFAKKIAKILKNAKISYKIDDTDQQIGYKINNSEVHGAPIRIEIGPN 351

Query: 613 EASERSIGIRR 623
           E     I + R
Sbjct: 352 EVKNNQICLVR 362


>gi|59711143|ref|YP_203919.1| alanyl-tRNA synthetase [Vibrio fischeri ES114]
 gi|71657966|sp|Q5E7G5|SYA_VIBF1 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|59479244|gb|AAW85031.1| alanyl-tRNA synthetase [Vibrio fischeri ES114]
          Length = 859

 Score = 38.9 bits (89), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 33/148 (22%), Positives = 64/148 (43%), Gaps = 21/148 (14%)

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIE 123
           E  R+  ++ HS  H++  A++ +  E     G +++ +   +DF   +   ++EL Q+E
Sbjct: 552 ETRRAAIILNHSATHLLHAALRQVLGEHVTQKGSLVKAENLRFDFSHLEAVKAEELRQVE 611

Query: 124 KKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGE 178
           + + + I  +       +  + A+E     LF  K +             + V +   GE
Sbjct: 612 RIVNQQIRLNHTIETDLMDIDAAKEKGAMALFGEKYD-------------DEVRVLSMGE 658

Query: 179 W-FDLCRGPHVRSTGQVKKFFKLMKVAG 205
           +  +LC G H  STG +   FK+    G
Sbjct: 659 FSTELCGGIHASSTGDI-GLFKITSEGG 685


>gi|310766672|gb|ADP11622.1| Alanyl-tRNA synthetase [Erwinia sp. Ejp617]
          Length = 876

 Score = 38.9 bits (89), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 38/174 (21%), Positives = 74/174 (42%), Gaps = 13/174 (7%)

Query: 27  AESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSCAHIMAEAV 85
           A  I  +  K A A+  +GK+   +  +R G  +     E  R+   + HS  H++  A+
Sbjct: 517 ASFIVSNTQKYAQAIGHSGKLA--TGELRVGDRVAAQVDEARRARIRLNHSATHLLHAAL 574

Query: 86  QSIWPEVQVAIGPIIEDGFY-YDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHE 144
           + +  +     G ++ D +  +DF   +  +  E+ Q+E+ +   I R+ P     +  E
Sbjct: 575 RQVLGQHVSQKGSLVNDKYLRFDFSHFEAMTQQEIRQVEEIVNAQIRRNLPIETNIMELE 634

Query: 145 KARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
            A+        A+    L      ++V +   G++  +LC G H   TG +  F
Sbjct: 635 AAK--------AHGAMALFGEKYDDHVRVLSMGDFSTELCGGTHATRTGDIGLF 680


>gi|34541370|ref|NP_905849.1| phosphoribulokinase family protein [Porphyromonas gingivalis W83]
 gi|34397687|gb|AAQ66748.1| phosphoribulokinase family protein [Porphyromonas gingivalis W83]
          Length = 529

 Score = 38.9 bits (89), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 30/140 (21%), Positives = 60/140 (42%), Gaps = 1/140 (0%)

Query: 26  VAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSCAHIMAEA 84
           +AE     L  +     +N    DL   + E S +   +  D   +     + + I+++A
Sbjct: 1   MAEYFQDDLGFRPFNAQVNHCTRDLGFRLYEPSDVLFASFSDESGMRTYVRTLSFILSKA 60

Query: 85  VQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHE 144
           V  I P  ++ I   + +G+Y         +  E+ +I+++M+ +I  D PF       E
Sbjct: 61  VADILPGSKLFIEHSLSNGYYCQIKNAHMITPGEIVRIKERMESLIVADIPFRAHCERTE 120

Query: 145 KARELFESKKEAYKVEILES 164
           +   +F S     K ++LE+
Sbjct: 121 EVAAMFRSMGYEDKADLLET 140


>gi|325290063|ref|YP_004266244.1| alanyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
 gi|324965464|gb|ADY56243.1| alanyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
          Length = 875

 Score = 38.9 bits (89), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 63/260 (24%), Positives = 106/260 (40%), Gaps = 32/260 (12%)

Query: 75  HSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++  A++ +  + VQ A   + E+   +DF      S++EL  +E+++   I   
Sbjct: 563 HSSTHLLHTALRKVLGQHVQQAGSLVSEERLRFDFSHFSAMSTEELNTVEEEINRQI--- 619

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTG 192
               +  LS   A    E  K    + +       E V + R GE+  +LC G HV++TG
Sbjct: 620 ----RGALSVNIAEMCMEDAKAQGAIALFGEKYGDE-VRVVRMGEFSTELCGGTHVQNTG 674

Query: 193 QVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES--EKRDHRKLA 250
           ++    K++  +G           L RI   A    ++   Y++ LEES  E     K A
Sbjct: 675 EI-GIVKILSESGI-------GAGLRRIEAVAG---KQALAYIHSLEESLEEIAVILKAA 723

Query: 251 REMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGH 310
               L    +    +    R+  K+   L  Y    I D  +EI   +VL   +      
Sbjct: 724 PGESLKKAGQMAGQLKDAEREIEKLNARLSKYEAENILDKVQEIQGVKVLAAKVQA---- 779

Query: 311 WDSYRANMFAVKCADDTIKD 330
                 +M A++   DT+KD
Sbjct: 780 -----PDMDALRKMSDTLKD 794


>gi|87307364|ref|ZP_01089509.1| alanyl-tRNA synthetase [Blastopirellula marina DSM 3645]
 gi|87290104|gb|EAQ81993.1| alanyl-tRNA synthetase [Blastopirellula marina DSM 3645]
          Length = 937

 Score = 38.9 bits (89), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 58/133 (43%), Gaps = 11/133 (8%)

Query: 68  RSLAVIR-HSCAHIMAEAVQ-SIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           R L + R HS  HI+  A+Q ++    Q     + ED   +DF      + ++LA IE+ 
Sbjct: 553 RRLGIQRAHSATHILHYALQKNLGAHAQQQGSKVDEDWLRFDFTNLAAVTPEQLAAIEED 612

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF-DLCR 184
           + E +        + +   KAREL         +   E  P  + V L   G +  +LC 
Sbjct: 613 VNERVEASEKVKWETVPLAKAREL------GAMMLFGEKYP--DPVRLVSMGTFSRELCG 664

Query: 185 GPHVRSTGQVKKF 197
           G H+ STG V  F
Sbjct: 665 GTHLTSTGDVGMF 677


>gi|289524521|ref|ZP_06441375.1| alanine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC BAA-1850]
 gi|289502239|gb|EFD23403.1| alanine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC BAA-1850]
          Length = 244

 Score = 38.9 bits (89), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 32/125 (25%), Positives = 59/125 (47%), Gaps = 16/125 (12%)

Query: 75  HSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           H+  HI+ EA+  +  P ++ A   +  + F +DF      S D++ +IE+   E+I  +
Sbjct: 70  HTSTHIVHEALTRVLGPHIRQAGSYVSPNYFRFDFTHFDAISRDDIVKIEQIANEVIQAN 129

Query: 134 SPFLKQYLSHEKAREL----FESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
                   S E+A+++    F  +K   +V +++ IP          G   +LC G HV 
Sbjct: 130 IKLNIFETSMEEAKKIGAKAFFDEKYGDRVRVIQ-IP----------GYCAELCGGLHVN 178

Query: 190 STGQV 194
           +TG +
Sbjct: 179 ATGDI 183


>gi|289450565|ref|YP_003475604.1| alanine--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5]
 gi|289185112|gb|ADC91537.1| alanine--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5]
          Length = 886

 Score = 38.9 bits (89), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 32/134 (23%), Positives = 62/134 (46%), Gaps = 11/134 (8%)

Query: 67  PRSLAVIR-HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEK 124
           P  + ++R HS  H++ +A++++        G ++  +   +DF   +P +++EL QIE 
Sbjct: 564 PVRMDIMRNHSATHLLHKALRTVLGTHVTQAGSLVNAEHLRFDFHHMKPCTAEELRQIEA 623

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLC 183
           ++   I      L  Y S  +   + E+KK+       E     + V +   G++  + C
Sbjct: 624 EVNRAI------LANYQSVTEVMPMAEAKKKGAMALFDEKY--GDMVRVVSMGDYSVEFC 675

Query: 184 RGPHVRSTGQVKKF 197
            G H+  T QV  F
Sbjct: 676 GGTHLSETSQVGIF 689


>gi|10177227|dbj|BAB10601.1| alanyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 954

 Score = 38.9 bits (89), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 31/145 (21%), Positives = 62/145 (42%), Gaps = 17/145 (11%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSD 117
           +E     D R  A + H+  H++  A++ +  +     G ++  D   +DF+  +    +
Sbjct: 615 VEAAVDADLRQRAKVHHTATHLLQSALKKVVGQETSQAGSLVAFDRLRFDFNFNRSLHDN 674

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVT 172
           EL +IE  +   I   +    + L    A+      +F  K +  +V ++E +P      
Sbjct: 675 ELEEIECLINRWIGDATRLETKVLPLADAKRAGAIAMFGEKYDENEVRVVE-VP------ 727

Query: 173 LYRQGEWFDLCRGPHVRSTGQVKKF 197
               G   +LC G HV +T +++ F
Sbjct: 728 ----GVSMELCGGTHVGNTAEIRAF 748


>gi|12045148|ref|NP_072959.1| alanyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|1351145|sp|P47534|SYA_MYCGE RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|3844871|gb|AAC71513.1| alanyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|166078929|gb|ABY79547.1| alanyl-tRNA synthetase [synthetic Mycoplasma genitalium JCVI-1.0]
          Length = 900

 Score = 38.9 bits (89), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 36/154 (23%), Positives = 66/154 (42%), Gaps = 26/154 (16%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYY--------DFDKEQPFSSDEL 119
           R LA   HS  H++  A+Q         I P+I+    +        DF+  +  + +EL
Sbjct: 561 RKLAANNHSLEHLLHAALQK-------EIDPLIKQSGAFKSAQKATIDFNLNRHLTRNEL 613

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES-IPAKENVTLYRQGE 178
            ++E K++ +I       KQ +S ++    FE  ++   +   E      E + + R G+
Sbjct: 614 EKVENKIRSLI-------KQKISSKEIFTDFEGSQKLNAIAYFEEEYSQHEILRVIRFGD 666

Query: 179 W-FDLCRGPHVRSTGQVKKFF--KLMKVAGAYWR 209
           +  +LC G HV +T  ++  F      +    WR
Sbjct: 667 YSVELCGGTHVANTASIEDCFITDFYSLGAGRWR 700


>gi|262273554|ref|ZP_06051368.1| GTP pyrophosphokinase (p)ppGpp synthetase
           II/guanosine-3',5'-bis(diphosphate)
           3'-pyrophosphohydrolase [Grimontia hollisae CIP 101886]
 gi|262222532|gb|EEY73843.1| GTP pyrophosphokinase (p)ppGpp synthetase
           II/guanosine-3',5'-bis(diphosphate)
           3'-pyrophosphohydrolase [Grimontia hollisae CIP 101886]
          Length = 702

 Score = 38.9 bits (89), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 1/68 (1%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIE 60
           P ++ +  P G I   PV AT  D A ++   +    V   +N +   LS P++ G +IE
Sbjct: 389 PDELFVFTPKGRIVELPVGATAVDFAYAVHTDVGNSCVGARVNRQSYPLSQPLKNGQTIE 448

Query: 61  IITPEDPR 68
           IIT    R
Sbjct: 449 IITAPGAR 456


>gi|59798539|sp|Q6LMU3|SYA_PHOPR RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
          Length = 873

 Score = 38.9 bits (89), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 32/145 (22%), Positives = 63/145 (43%), Gaps = 21/145 (14%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKM 126
           R+   + HS  H++  A++++  E     G +++ D   +DF   +    ++L +IE+ +
Sbjct: 555 RTAITLNHSATHLLHSALRNLLGEHVAQKGSLVKPDALRFDFSNLEAVKPEQLREIERVV 614

Query: 127 QEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEW-F 180
            E I  +       +  E A++     LF  K +             + V +   GE+  
Sbjct: 615 NEQIRLNHSIDTNIMDIESAKQKGAMALFGEKYD-------------DEVRVLSMGEFST 661

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAG 205
           +LC G H ++TG +   FK+    G
Sbjct: 662 ELCGGIHAKNTGDI-GLFKITSEGG 685


>gi|225619382|ref|YP_002720608.1| type I site-specific deoxyribonuclease, HsdR family [Brachyspira
           hyodysenteriae WA1]
 gi|225214201|gb|ACN82935.1| type I site-specific deoxyribonuclease, HsdR family [Brachyspira
           hyodysenteriae WA1]
          Length = 1021

 Score = 38.9 bits (89), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 48/86 (55%), Gaps = 7/86 (8%)

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNL---PLWLSPIQAIVTTITSSAVEYAQ 569
           +H EK   V+I +A   +  R IGI I  +K  L   P W + I+ ++TT     VE+ +
Sbjct: 542 AHYEKRKNVLIGKAFIVAYSRPIGIKI--YKKILELKPDWENMIKPVMTTSNKDPVEWGK 599

Query: 570 EIANLLKSHHLSIETDFRNETINYKI 595
            + +  KSH  ++  +F+++T N+KI
Sbjct: 600 MLGS--KSHRDNLAKEFKDKTSNFKI 623


>gi|189425343|ref|YP_001952520.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacter lovleyi SZ]
 gi|189421602|gb|ACD96000.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacter lovleyi SZ]
          Length = 716

 Score = 38.9 bits (89), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 1/63 (1%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI-E 60
           P ++ +  P G +K FP  +T  D A ++   +  + V   +NGK+  L   ++ G I E
Sbjct: 384 PEEVYVFTPKGDVKGFPKGSTPIDFAYAVHTDVGHRCVGAKVNGKLVPLKHELQNGDIVE 443

Query: 61  IIT 63
           +IT
Sbjct: 444 VIT 446


>gi|45188236|ref|NP_984459.1| ADR363Cp [Ashbya gossypii ATCC 10895]
 gi|44983080|gb|AAS52283.1| ADR363Cp [Ashbya gossypii ATCC 10895]
          Length = 956

 Score = 38.9 bits (89), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 23/140 (16%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIE-------KKM 126
           H+  H++  A+++I  +     G ++  +   +DF  ++P S +EL Q+E       ++ 
Sbjct: 600 HTGTHLLNHALRTILGDNIDQRGSLVTPEKLRFDFSHKKPMSYEELEQVETICNQQIREN 659

Query: 127 QEIIARDSPFLKQYLSHEKARELF-ESKKEAYKV--------EILESIPAKENVTLYRQG 177
           + +  +D P L    S    R +F E+  +  +V        EILES P+ E    Y   
Sbjct: 660 RSVYYKDIP-LDVAKSIHSIRAVFGETYPDPVRVVSVGKSVDEILES-PSNEEWAKYS-- 715

Query: 178 EWFDLCRGPHVRSTGQVKKF 197
              +LC G HV  TG +K+F
Sbjct: 716 --IELCGGTHVSKTGDIKEF 733


>gi|324992246|gb|EGC24168.1| GTP diphosphokinase [Streptococcus sanguinis SK405]
 gi|324994337|gb|EGC26251.1| GTP diphosphokinase [Streptococcus sanguinis SK678]
 gi|327459563|gb|EGF05909.1| GTP diphosphokinase [Streptococcus sanguinis SK1]
 gi|327490763|gb|EGF22544.1| GTP diphosphokinase [Streptococcus sanguinis SK1058]
          Length = 739

 Score = 38.9 bits (89), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 1/64 (1%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SI 59
           +  +I +  PDG++++ P  +   D A  I   + +KA    +NG++  L+  +R G  +
Sbjct: 390 LAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLRTGDQV 449

Query: 60  EIIT 63
           EIIT
Sbjct: 450 EIIT 453


>gi|298368683|ref|ZP_06980001.1| alanine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
 gi|298282686|gb|EFI24173.1| alanine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
          Length = 1021

 Score = 38.9 bits (89), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 74/173 (42%), Gaps = 24/173 (13%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQP--FSSDELAQIE 123
           D R   +  HS  H+M +A++ +     V     +++     FD   P   S++E+A++E
Sbjct: 700 DIRDSIMRNHSVTHLMHKALRDVLG-THVEQKGSLQNAELTRFDISHPQGISAEEIAEVE 758

Query: 124 KKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGE 178
           +++   I  + P   + +S E A++     LF  K   +             V +   G+
Sbjct: 759 RRVNAAIIANVPVKVETMSIEDAQKSGAMMLFGEKYGDF-------------VRVITMGD 805

Query: 179 W-FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQE 230
           +  +LC G HV  TG +  FFK++   G    G      ++ +   AW   QE
Sbjct: 806 YSTELCGGTHVARTGDI-GFFKIIS-EGGIAAGIRRVEAITGLAALAWAQNQE 856


>gi|255065962|ref|ZP_05317817.1| alanine--tRNA ligase [Neisseria sicca ATCC 29256]
 gi|255049873|gb|EET45337.1| alanine--tRNA ligase [Neisseria sicca ATCC 29256]
          Length = 874

 Score = 38.9 bits (89), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 74/173 (42%), Gaps = 24/173 (13%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQP--FSSDELAQIE 123
           D R   +  HS  H+M +A++ +     V     +++     FD   P   S++E+A++E
Sbjct: 553 DIRDSIMRNHSVTHLMHKALRDVLG-THVEQKGSLQNAELTRFDISHPQGISAEEIAEVE 611

Query: 124 KKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGE 178
           +++   I  + P   + +S E A++     LF  K   +             V +   G+
Sbjct: 612 RRVNAAIIANVPVKVETMSIEDAQKSGAMMLFGEKYGDF-------------VRVITMGD 658

Query: 179 W-FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQE 230
           +  +LC G HV  TG +  FFK++   G    G      ++ +   AW   QE
Sbjct: 659 YSTELCGGTHVARTGDI-GFFKIIS-EGGIAAGIRRVEAITGLAALAWAQNQE 709


>gi|242238445|ref|YP_002986626.1| alanyl-tRNA synthetase [Dickeya dadantii Ech703]
 gi|242130502|gb|ACS84804.1| alanyl-tRNA synthetase [Dickeya dadantii Ech703]
          Length = 875

 Score = 38.9 bits (89), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 28/127 (22%), Positives = 53/127 (41%), Gaps = 10/127 (7%)

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY-YDFDKEQPFSSDELAQIEKKMQEIIA 131
           + HS  H++  A++ +        G ++ D +  +DF   +    DE+ Q+E  +   + 
Sbjct: 562 LNHSATHLLHAALRQVLGTHVAQKGSLVNDRYLRFDFSHPEAMKPDEIRQVEDIVNAQVR 621

Query: 132 RDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRS 190
           R+ P     ++ + AR        A     L      + V +   G++  +LC G H R 
Sbjct: 622 RNLPVDTAIMAIDDAR--------AKGAMALFGEKYDDQVRVLTMGDFSIELCGGIHARR 673

Query: 191 TGQVKKF 197
           TG +  F
Sbjct: 674 TGDIGLF 680


>gi|125717126|ref|YP_001034259.1| GTP pyrophosphokinase [Streptococcus sanguinis SK36]
 gi|323353559|ref|ZP_08088092.1| GTP diphosphokinase [Streptococcus sanguinis VMC66]
 gi|125497043|gb|ABN43709.1| GTP pyrophosphokinase, putative [Streptococcus sanguinis SK36]
 gi|322121505|gb|EFX93268.1| GTP diphosphokinase [Streptococcus sanguinis VMC66]
          Length = 739

 Score = 38.9 bits (89), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 1/64 (1%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SI 59
           +  +I +  PDG++++ P  +   D A  I   + +KA    +NG++  L+  +R G  +
Sbjct: 390 LAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLRTGDQV 449

Query: 60  EIIT 63
           EIIT
Sbjct: 450 EIIT 453


>gi|332364861|gb|EGJ42630.1| GTP diphosphokinase [Streptococcus sanguinis SK1059]
          Length = 739

 Score = 38.9 bits (89), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 1/64 (1%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SI 59
           +  +I +  PDG++++ P  +   D A  I   + +KA    +NG++  L+  +R G  +
Sbjct: 390 LAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLRTGDQV 449

Query: 60  EIIT 63
           EIIT
Sbjct: 450 EIIT 453


>gi|260911675|ref|ZP_05918255.1| alpha-amylase [Prevotella sp. oral taxon 472 str. F0295]
 gi|260634223|gb|EEX52333.1| alpha-amylase [Prevotella sp. oral taxon 472 str. F0295]
          Length = 716

 Score = 38.9 bits (89), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 49/204 (24%), Positives = 85/204 (41%), Gaps = 30/204 (14%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIEIIT--- 63
           L  P+G      +  TG    ES+SR           NG++      +++  + + T   
Sbjct: 515 LQLPEGRFGAIDL-LTGETTIESLSRDGKIPMTLAPYNGRIFKFKTKMKDDELLLCTHNK 573

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE---DGFYYDFDKEQPFSSDELA 120
            E P +     H+  H++ + +  ++ +   +    +E       Y  D+ +P   DE  
Sbjct: 574 DEFPPA-----HTAEHLLNQVMIRMF-DCGRSTNAHVERKKSKISYTLDR-KPSRQDE-K 625

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN--VTLYRQGE 178
           +IE++M E+I  D P   + +      E  +          L+ +P   +  V + R G+
Sbjct: 626 EIERRMNELIEEDLPVTYELVDRYDLPEGID----------LDRVPDDYSNVVRIVRIGD 675

Query: 179 WFDLCR--GPHVRSTGQVKKFFKL 200
            FD C   G HVRSTGQ+ KF  L
Sbjct: 676 -FDTCSCIGKHVRSTGQIGKFVML 698


>gi|332364552|gb|EGJ42323.1| GTP diphosphokinase [Streptococcus sanguinis SK355]
          Length = 739

 Score = 38.9 bits (89), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 1/64 (1%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SI 59
           +  +I +  PDG++++ P  +   D A  I   + +KA    +NG++  L+  +R G  +
Sbjct: 390 LAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLRTGDQV 449

Query: 60  EIIT 63
           EIIT
Sbjct: 450 EIIT 453


>gi|327472975|gb|EGF18402.1| GTP diphosphokinase [Streptococcus sanguinis SK408]
          Length = 739

 Score = 38.9 bits (89), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 1/64 (1%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SI 59
           +  +I +  PDG++++ P  +   D A  I   + +KA    +NG++  L+  +R G  +
Sbjct: 390 LAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLRTGDQV 449

Query: 60  EIIT 63
           EIIT
Sbjct: 450 EIIT 453


>gi|325693851|gb|EGD35770.1| GTP diphosphokinase [Streptococcus sanguinis SK150]
 gi|325697814|gb|EGD39698.1| GTP diphosphokinase [Streptococcus sanguinis SK160]
 gi|327468679|gb|EGF14158.1| GTP diphosphokinase [Streptococcus sanguinis SK330]
          Length = 739

 Score = 38.9 bits (89), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 1/64 (1%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SI 59
           +  +I +  PDG++++ P  +   D A  I   + +KA    +NG++  L+  +R G  +
Sbjct: 390 LAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLRTGDQV 449

Query: 60  EIIT 63
           EIIT
Sbjct: 450 EIIT 453


>gi|242242892|ref|ZP_04797337.1| alanyl-tRNA synthetase [Staphylococcus epidermidis W23144]
 gi|242233667|gb|EES35979.1| alanyl-tRNA synthetase [Staphylococcus epidermidis W23144]
          Length = 876

 Score = 38.9 bits (89), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 38/178 (21%), Positives = 75/178 (42%), Gaps = 22/178 (12%)

Query: 39  VAVAINGK-----VCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQ 93
           V  A NG+     V    +  +   +E    ++ R L    HS  H++  A++ +  +  
Sbjct: 524 VTKAPNGQNLHKGVVQFGEATQNAKVEARVNKEDRRLIQKNHSATHLLHAALKEVLGDHV 583

Query: 94  VAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKAREL--- 149
              G ++E +   +DF    P + +E+  +E+++ E I R      Q +S E+A+ +   
Sbjct: 584 NQAGSLVEPERLRFDFSHFGPMTQEEINLVERRVNEEIWRAIDVRIQEMSIEEAKSIGAM 643

Query: 150 -FESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGA 206
               +K    V ++   P              +LC G HV +T ++   FK++  +G 
Sbjct: 644 ALFGEKYGDIVRVVNMAPFS-----------IELCGGIHVNNTAEI-GLFKIVSESGT 689


>gi|327459163|gb|EGF05511.1| GTP diphosphokinase [Streptococcus sanguinis SK1057]
 gi|332358570|gb|EGJ36394.1| GTP diphosphokinase [Streptococcus sanguinis SK1056]
          Length = 739

 Score = 38.5 bits (88), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 1/64 (1%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SI 59
           +  +I +  PDG++++ P  +   D A  I   + +KA    +NG++  L+  +R G  +
Sbjct: 390 LAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLRTGDQV 449

Query: 60  EIIT 63
           EIIT
Sbjct: 450 EIIT 453


>gi|324990418|gb|EGC22356.1| GTP diphosphokinase [Streptococcus sanguinis SK353]
 gi|325688565|gb|EGD30582.1| GTP diphosphokinase [Streptococcus sanguinis SK72]
          Length = 739

 Score = 38.5 bits (88), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 1/64 (1%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SI 59
           +  +I +  PDG++++ P  +   D A  I   + +KA    +NG++  L+  +R G  +
Sbjct: 390 LAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLRTGDQV 449

Query: 60  EIIT 63
           EIIT
Sbjct: 450 EIIT 453


>gi|332653665|ref|ZP_08419409.1| GTP diphosphokinase [Ruminococcaceae bacterium D16]
 gi|332516751|gb|EGJ46356.1| GTP diphosphokinase [Ruminococcaceae bacterium D16]
          Length = 745

 Score = 38.5 bits (88), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 1/61 (1%)

Query: 10  PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI-EIITPEDPR 68
           P+G +K+ P  AT  D A +I  ++    V   +NG++     P++ G I E+IT ++ +
Sbjct: 396 PNGDVKSLPAGATPIDFAYNIHSAVGNGMVGAKVNGRMVPYDTPLKNGDIVEVITSKNAK 455

Query: 69  S 69
            
Sbjct: 456 G 456


>gi|153807409|ref|ZP_01960077.1| hypothetical protein BACCAC_01688 [Bacteroides caccae ATCC 43185]
 gi|149129771|gb|EDM20983.1| hypothetical protein BACCAC_01688 [Bacteroides caccae ATCC 43185]
          Length = 872

 Score = 38.5 bits (88), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 33/132 (25%), Positives = 58/132 (43%), Gaps = 12/132 (9%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEK 124
           D R+     HS  H++  A++ +  E     G ++  D   +DF   Q  + +E+ Q+E 
Sbjct: 554 DKRAACAANHSATHLLDAALREVLGEHIEQKGSLVTPDSLRFDFSHFQKVTDEEIRQVEH 613

Query: 125 KMQEIIARDSPFLKQY--LSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
            +   I  + P LK+Y  +  E+A+EL        K          + V + + G   + 
Sbjct: 614 IVNARIRANIP-LKEYRNIPIEEAKELGAIALFGEKY--------GDRVRVIQFGSSIEF 664

Query: 183 CRGPHVRSTGQV 194
           C G HV +TG +
Sbjct: 665 CGGTHVAATGNI 676


>gi|229585354|ref|YP_002843856.1| histidyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
 gi|259511959|sp|C3MZH9|SYH_SULIA RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|228020404|gb|ACP55811.1| histidyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
          Length = 426

 Score = 38.5 bits (88), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 48/103 (46%), Gaps = 13/103 (12%)

Query: 287 IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA 346
           IK  Y EI TP V +  L+   G  +  R  M+  K   D     R  +L+P   P    
Sbjct: 33  IKYGYSEIITPVVEEFKLFALKG-GEELRETMYVFKDKAD-----RELSLRPEITPSVAR 86

Query: 347 VFNHGLKSYRELPVRLAEFGSVYR-NEPSGSLHGLMRVRGFTQ 388
            +   L+S  + P+RL  FG+VYR +EP    +G  R R F Q
Sbjct: 87  AYIQNLQSSPK-PIRLFYFGTVYRYDEPQ---YG--RYREFRQ 123


>gi|330831302|ref|YP_004394254.1| alanyl-tRNA synthetase [Aeromonas veronii B565]
 gi|328806438|gb|AEB51637.1| Alanyl-tRNA synthetase [Aeromonas veronii B565]
          Length = 874

 Score = 38.5 bits (88), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 37/176 (21%), Positives = 72/176 (40%), Gaps = 21/176 (11%)

Query: 37  KAVAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAI 96
           KA    I+    +L    +   +E +   D R    + HS  H++  A++    E     
Sbjct: 525 KAGKAIIHKGYMELGTLEKGAEVEAVVDGDRRQAIALNHSVTHLLHAALRQALGEHVTQK 584

Query: 97  GPII-EDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LF 150
           G ++  +   +DF   +  +   + ++E+ +   I  +     Q +  E A+      LF
Sbjct: 585 GSLVGAERMRFDFSHFEGLTMATIRRVEELVNNQIRANHEITTQLMDLEAAKSAGAMALF 644

Query: 151 ESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKFFKLMKVAG 205
             K E             ++V + R G++  +LC G H + TG +  FFK++  +G
Sbjct: 645 GEKYE-------------DDVRVVRMGDYSTELCGGTHAKRTGDI-GFFKIIAESG 686


>gi|163868621|ref|YP_001609830.1| alanyl-tRNA synthetase [Bartonella tribocorum CIP 105476]
 gi|205829989|sp|A9IVY8|SYA_BART1 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|161018277|emb|CAK01835.1| Alanyl-tRNA synthetase [Bartonella tribocorum CIP 105476]
          Length = 888

 Score = 38.5 bits (88), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 44/171 (25%), Positives = 79/171 (46%), Gaps = 20/171 (11%)

Query: 36  KKAVAVAIN-GKV----CDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWP 90
           KKA  V I+ GKV      +SD V+  +++++  +  R+     HS  H++ EA++ +  
Sbjct: 525 KKADGVFIHLGKVKSGHAKISDCVQL-TVDVVRRKKIRA----NHSATHLLHEALRQVLG 579

Query: 91  EVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLS-----HE 144
                 G ++  +   +DF   +  S +EL +IE    EI+ +++    + ++      E
Sbjct: 580 SHVTQKGSLVSPERLRFDFSHPKSVSLEELKKIEDLANEIVLQNNKVTTRLMAVDEAISE 639

Query: 145 KARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQV 194
            A  LF  K E  +V ++      E   L +   W  +LC G HV  TG +
Sbjct: 640 GAMALFGEKYED-EVRVVSMGAPLEQGGLKKH--WSIELCGGTHVERTGDI 687


>gi|76162547|gb|AAX30465.2| SJCHGC03807 protein [Schistosoma japonicum]
          Length = 106

 Score = 38.5 bits (88), Expect = 3.3,   Method: Composition-based stats.
 Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 3/73 (4%)

Query: 552 PIQAIVTTITSSAVEYAQEIANLLKS--HHLSIETDFRNETINYKIREHSIKKIPIIIIC 609
           P Q +V  + S+  EYA E+ N L      +S++TD    T+N KIR   + +   I++ 
Sbjct: 1   PRQVLVVPVVSACDEYAIEVKNRLHDAGFMVSVDTD-PGRTLNKKIRNGQLLQNNFILVV 59

Query: 610 GDKEASERSIGIR 622
           G+KE +  ++ +R
Sbjct: 60  GEKEIANGTVNVR 72


>gi|328945328|gb|EGG39481.1| GTP diphosphokinase [Streptococcus sanguinis SK1087]
          Length = 739

 Score = 38.5 bits (88), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 1/64 (1%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SI 59
           +  +I +  PDG++++ P  +   D A  I   + +KA    +NG++  L+  +R G  +
Sbjct: 390 LAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLRTGDQV 449

Query: 60  EIIT 63
           EIIT
Sbjct: 450 EIIT 453


>gi|326336584|ref|ZP_08202753.1| alanine--tRNA ligase [Capnocytophaga sp. oral taxon 338 str. F0234]
 gi|325691249|gb|EGD33219.1| alanine--tRNA ligase [Capnocytophaga sp. oral taxon 338 str. F0234]
          Length = 877

 Score = 38.5 bits (88), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 43/185 (23%), Positives = 81/185 (43%), Gaps = 25/185 (13%)

Query: 34  LAKKAVAVAINGKVCDLSDPVREGSIEIITPE-------DP---------RSLAVIRHSC 77
           +  K    A NG++  + D  +E ++ I   E       DP         R+LA   HS 
Sbjct: 512 VGDKGTLQAANGELIYILDTKKENNLIIHIAEHLPENLNDPFQAEVASLSRTLAEANHSA 571

Query: 78  AHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPF 136
            H++ +A++ +    V+     +  +   +DF      + +EL ++E+ + + I    P 
Sbjct: 572 THLLHQALREVLGTHVEQKGSHVAPESLRFDFSHFAKLTQEELRKVERLVNKRIFEKIPL 631

Query: 137 LKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKK 196
            +    +   R+  ES   A   E        ++V + + GE  +LC G HV++TG +  
Sbjct: 632 EEH--RNIPIRQAIESGAMALFGE-----KYGDHVRMIQFGESKELCGGTHVKNTGDI-W 683

Query: 197 FFKLM 201
           FFK++
Sbjct: 684 FFKII 688


>gi|282866222|ref|ZP_06275269.1| alanyl-tRNA synthetase [Streptomyces sp. ACTE]
 gi|282559006|gb|EFB64561.1| alanyl-tRNA synthetase [Streptomyces sp. ACTE]
          Length = 889

 Score = 38.5 bits (88), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 43/173 (24%), Positives = 72/173 (41%), Gaps = 15/173 (8%)

Query: 57  GSIEIITPEDPRSLAVIR-HSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPF 114
           GS  +   +  R  A+ R HS  H+  +A++          G     G F +DF      
Sbjct: 554 GSSVLAAIDTTRRRAIARAHSATHLTHQALRDALGPTAAQAGSENSPGRFRFDFGSPAAV 613

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
               L  +E+K+ E++AR+     + +S + A      KK+    E  E     E V + 
Sbjct: 614 PGTVLTDVEQKINEVLARELDVQAEVMSIDDA------KKQGAIAEFGEKY--GERVRVV 665

Query: 175 RQGEWF-DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWN 226
             G++  +LC G HV +T Q      L+K+ G    G   R + + +   A+N
Sbjct: 666 TIGDFSKELCGGTHVHNTAQ----LGLVKLLGESSIGSGVRRIEALVGVDAYN 714


>gi|71066015|ref|YP_264742.1| alanyl-tRNA synthetase [Psychrobacter arcticus 273-4]
 gi|83305857|sp|Q4FRQ0|SYA_PSYA2 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|71039000|gb|AAZ19308.1| alanyl-tRNA synthetase [Psychrobacter arcticus 273-4]
          Length = 890

 Score = 38.5 bits (88), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 37/153 (24%), Positives = 68/153 (44%), Gaps = 14/153 (9%)

Query: 54  VREGSIEIITPEDPRSLAVIR------HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYY 106
           V  G I+     D + L+ IR      HS  H++  A++ +  +     G ++  +   +
Sbjct: 541 VTMGEIKTKQTADAQVLSSIRAASAKNHSATHLLHAALREVLGDAVTQKGSLVSSEVLRF 600

Query: 107 DFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLS-----HEKARELFESKKEAYKVEI 161
           DF  ++P S  E+ +IE+ + E I  ++P   + +       + A  LF  +K    V +
Sbjct: 601 DFSYDKPVSPAEIMRIERLVNEQIQANTPTRIENMPIDEAIKQGAMALF-GEKYGNDVRV 659

Query: 162 LESIPAKENVTLYRQGEWFDLCRGPHVRSTGQV 194
           L ++     V   R     +LC G HV+ TG +
Sbjct: 660 L-TMGTDSIVDGQRMPFSIELCGGLHVQRTGDI 691


>gi|325689533|gb|EGD31538.1| GTP diphosphokinase [Streptococcus sanguinis SK115]
 gi|332359380|gb|EGJ37201.1| GTP diphosphokinase [Streptococcus sanguinis SK49]
          Length = 739

 Score = 38.5 bits (88), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 1/64 (1%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SI 59
           +  +I +  PDG++++ P  +   D A  I   + +KA    +NG++  L+  +R G  +
Sbjct: 390 LAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLRTGDQV 449

Query: 60  EIIT 63
           EIIT
Sbjct: 450 EIIT 453


>gi|73669588|ref|YP_305603.1| Ala-tRNA(Pro) hydrolase [Methanosarcina barkeri str. Fusaro]
 gi|121722150|sp|Q46AR9|ALAXM_METBF RecName: Full=Alanyl-tRNA editing protein AlaX-M; Short=AlaX-M;
           AltName: Full=Alanyl-tRNA deacylase AlaX-M
 gi|72396750|gb|AAZ71023.1| Ala-tRNA(Pro) hydrolase [Methanosarcina barkeri str. Fusaro]
          Length = 243

 Score = 38.5 bits (88), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 71/155 (45%), Gaps = 17/155 (10%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D R   +  H+  H++A  ++      Q+    +  D    DF  E  F  D+ A+ EK 
Sbjct: 96  DRRYRHMRMHTATHVIANVIEK-EAGAQITGNQLGLDQSRVDFSLE-VFDRDKFAEYEKI 153

Query: 126 MQEIIARDSPFLKQYLSHEKARELFE---SKKEAYKVEILE-SIPAKENVTLYRQGEWFD 181
             ++IA+ SP     +S ++A E      +  + +  EI E  I   E VT+       +
Sbjct: 154 ANDLIAQKSPVNLYLVSRKEAEEKLSRLTTLAKGFSDEIKEVRIVEIEGVTI-------E 206

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPM 216
            C G HV++T ++K   K++K+     +G SNR M
Sbjct: 207 ACGGTHVKNTEEIKG-VKIIKLQN---KGKSNRRM 237


>gi|15668744|ref|NP_247543.1| alanyl-tRNA synthetase [Methanocaldococcus jannaschii DSM 2661]
 gi|2500963|sp|Q57984|SYA_METJA RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|1591270|gb|AAB98556.1| alanyl-tRNA synthetase (alaS) [Methanocaldococcus jannaschii DSM
           2661]
          Length = 892

 Score = 38.5 bits (88), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 40/161 (24%), Positives = 73/161 (45%), Gaps = 7/161 (4%)

Query: 46  KVCDLSDPVREGSIEIITPEDPRSLAVIR-HSCAHIMAEAVQSIWPE-VQVAIGPIIEDG 103
           K+ +L+D ++EG I     +  R L+++R H+  HI+  A Q +    V  A   +  D 
Sbjct: 560 KIENLNDELKEGDIVKGVIDWKRRLSLMRNHTATHIINAAAQKVLGRHVWQAGSDVDVDK 619

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE 163
              D    +  S +EL  IE+   EI+  +      ++   +A E F  +   Y+  ++ 
Sbjct: 620 ARLDITHYKRISREELKDIERVANEIVLNNYNIKSIFMDRNEAEEKFGFR--IYQGGVVP 677

Query: 164 SIPAKENVTLYRQGEWFDL--CRGPHVRSTGQVKKFFKLMK 202
               +  +     G   D+  C G H ++TG+V  F K++K
Sbjct: 678 GNVLRIVIIEDENGNIVDVQACGGTHCQNTGEV-GFIKIIK 717


>gi|256818974|ref|YP_003140253.1| alanyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271]
 gi|256580557|gb|ACU91692.1| alanyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271]
          Length = 877

 Score = 38.5 bits (88), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 56/262 (21%), Positives = 113/262 (43%), Gaps = 39/262 (14%)

Query: 48  CDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYY 106
            +L+DP +   +  I+    R +A   HS  H++ +A++ +    V+     +  +   +
Sbjct: 547 TNLNDPFK-AEVHSIS----REMAEANHSATHLLHQALREVLGTHVEQKGSRVAPETLRF 601

Query: 107 DFDKEQPFSSDELAQIEKKMQEIIARDSPFLK------QYLSHEKARELFESKKEAYKVE 160
           DF      + +EL ++E+ +   I    P  +      Q      A  LF  K       
Sbjct: 602 DFSHFAKLTEEELKKVEQLVNRRIFEKIPLQEHRNIPMQQAVESGAMALFGEK------- 654

Query: 161 ILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRI 220
                   + V + + G+  +LC G HV++TG +  +FK++   GA   G      ++R 
Sbjct: 655 ------YGDRVRMIQFGDSKELCGGTHVKNTGDI-WYFKIIS-EGAVAAGIRRIEAITRG 706

Query: 221 YGTAWNTQQELTQYLYFLEESEK--RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQT 278
               + T+QE  Q +  ++E+ K  +D  K  R     H+ E+ + +   H++  ++ + 
Sbjct: 707 GAMKYFTEQE--QLVEQIKETLKNAQDPVKAIR-----HLQEENAAL---HKELEQLRKE 756

Query: 279 LISYMRRKIKDDYEEINTPQVL 300
               ++  IK ++ E+N  Q L
Sbjct: 757 QAKQLKTSIKAEFTEVNGVQCL 778


>gi|30688660|ref|NP_680210.2| EMB1030 (EMBRYO DEFECTIVE 1030); ATP binding / alanine-tRNA ligase/
           ligase, forming aminoacyl-tRNA and related compounds /
           nucleic acid binding / nucleotide binding [Arabidopsis
           thaliana]
 gi|322510075|sp|Q9FFC7|SYAP_ARATH RecName: Full=Probable alanyl-tRNA synthetase, chloroplastic;
           AltName: Full=Alanine--tRNA ligase; Short=AlaRS;
           AltName: Full=Protein EMBRYO DEFECTIVE 1030; AltName:
           Full=Protein EMBRYO DEFECTIVE 263; AltName: Full=Protein
           EMBRYO DEFECTIVE 86; Flags: Precursor
 gi|332005698|gb|AED93081.1| alanyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 978

 Score = 38.5 bits (88), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 31/145 (21%), Positives = 62/145 (42%), Gaps = 17/145 (11%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSD 117
           +E     D R  A + H+  H++  A++ +  +     G ++  D   +DF+  +    +
Sbjct: 639 VEAAVDADLRQRAKVHHTATHLLQSALKKVVGQETSQAGSLVAFDRLRFDFNFNRSLHDN 698

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVT 172
           EL +IE  +   I   +    + L    A+      +F  K +  +V ++E +P      
Sbjct: 699 ELEEIECLINRWIGDATRLETKVLPLADAKRAGAIAMFGEKYDENEVRVVE-VP------ 751

Query: 173 LYRQGEWFDLCRGPHVRSTGQVKKF 197
               G   +LC G HV +T +++ F
Sbjct: 752 ----GVSMELCGGTHVGNTAEIRAF 772


>gi|242242903|ref|ZP_04797348.1| histidyl-tRNA synthetase [Staphylococcus epidermidis W23144]
 gi|242233618|gb|EES35930.1| histidyl-tRNA synthetase [Staphylococcus epidermidis W23144]
          Length = 424

 Score = 38.5 bits (88), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 20/82 (24%), Positives = 40/82 (48%)

Query: 557 VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASE 616
           V T+   A  YA ++ N L+ + + ++ D+ N  I  ++++         ++ GD+E   
Sbjct: 334 VVTMGEDADRYAVKLINDLRRNGIKVDKDYLNRKIKGQMKQADRLNAKYTVVIGDQELEN 393

Query: 617 RSIGIRRFGSTTTQKVSLLDAI 638
             IG++   S  T+ V L + I
Sbjct: 394 NEIGVKNMISGETENVQLDELI 415


>gi|220903571|ref|YP_002478883.1| alanyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219867870|gb|ACL48205.1| alanyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 892

 Score = 38.5 bits (88), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 35/148 (23%), Positives = 62/148 (41%), Gaps = 16/148 (10%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSD 117
           + +    D R      H+C H++  A++ +  P V+ A   +      +DF      + +
Sbjct: 562 VRLAVDPDERKATARNHTCTHLLHAALRRVLGPHVKQAGSLVDGRRLRFDFSHIAALTPE 621

Query: 118 ELAQIEKKMQ-------EIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN 170
           ELA +E+++        E+ AR+ P      +   A  LF ++K    V +L    A+  
Sbjct: 622 ELAAVERQVNAAILADLEVSAREMPMADAVAAGAIA--LF-NEKYGSTVRVLTVAGAE-- 676

Query: 171 VTLYRQGEWFDLCRGPHVRSTGQVKKFF 198
                  E  +LC G H+  TG+   FF
Sbjct: 677 ---MCDPESVELCGGTHLARTGEAGAFF 701


>gi|71894601|ref|YP_278709.1| seryl-tRNA synthetase [Mycoplasma synoviae 53]
 gi|71851389|gb|AAZ43998.1| seryl-tRNA synthetase [Mycoplasma synoviae 53]
          Length = 421

 Score = 38.5 bits (88), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 26/118 (22%), Positives = 57/118 (48%), Gaps = 5/118 (4%)

Query: 213 NRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI----AEDGSGVIFW 268
           N P+    +G   N  + +  Y    ++  ++ H ++A E+++  I     + GS  + +
Sbjct: 106 NLPLDEIPFGKDENDNKVINVYEIGTKKDFEKPHYEIASELNMIDIPRAVKQSGSRFVIY 165

Query: 269 HRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD 325
             +G K+ + LI++M    K   Y+E  TP ++   +   +G    ++ +MF V+ +D
Sbjct: 166 KNEGSKLVRALINFMLDLHKQKGYDEFLTPYLVRSEMLFGTGQLPKFKEDMFKVENSD 223


>gi|326335831|ref|ZP_08202010.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
           [Capnocytophaga sp. oral taxon 338 str. F0234]
 gi|325691975|gb|EGD33935.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
           [Capnocytophaga sp. oral taxon 338 str. F0234]
          Length = 734

 Score = 38.5 bits (88), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 1/58 (1%)

Query: 10  PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPED 66
           P+G IK+ P  AT  D A SI   +        +NGK+  L+  +R G  +EIIT E+
Sbjct: 410 PNGEIKSLPKGATPLDFAFSIHTEVGMHTRGAKVNGKLVPLNYKLRSGEQVEIITAEN 467


>gi|54310165|ref|YP_131185.1| alanyl-tRNA synthetase [Photobacterium profundum SS9]
 gi|46914606|emb|CAG21383.1| putative alanyl-tRNA synthetase [Photobacterium profundum SS9]
          Length = 906

 Score = 38.5 bits (88), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 32/145 (22%), Positives = 63/145 (43%), Gaps = 21/145 (14%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKM 126
           R+   + HS  H++  A++++  E     G +++ D   +DF   +    ++L +IE+ +
Sbjct: 588 RTAITLNHSATHLLHSALRNLLGEHVAQKGSLVKPDALRFDFSNLEAVKPEQLREIERVV 647

Query: 127 QEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEW-F 180
            E I  +       +  E A++     LF  K +             + V +   GE+  
Sbjct: 648 NEQIRLNHSIDTNIMDIESAKQKGAMALFGEKYD-------------DEVRVLSMGEFST 694

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAG 205
           +LC G H ++TG +   FK+    G
Sbjct: 695 ELCGGIHAKNTGDI-GLFKITSEGG 718


>gi|315224360|ref|ZP_07866194.1| alanine--tRNA ligase [Capnocytophaga ochracea F0287]
 gi|314945750|gb|EFS97765.1| alanine--tRNA ligase [Capnocytophaga ochracea F0287]
          Length = 877

 Score = 38.5 bits (88), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 56/262 (21%), Positives = 113/262 (43%), Gaps = 39/262 (14%)

Query: 48  CDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYY 106
            +L+DP +   +  I+    R +A   HS  H++ +A++ +    V+     +  +   +
Sbjct: 547 TNLNDPFK-AEVHSIS----REMAEANHSATHLLHQALREVLGTHVEQKGSRVAPETLRF 601

Query: 107 DFDKEQPFSSDELAQIEKKMQEIIARDSPFLK------QYLSHEKARELFESKKEAYKVE 160
           DF      + +EL ++E+ +   I    P  +      Q      A  LF  K       
Sbjct: 602 DFSHFAKLTEEELKKVEQLVNRRIFEKIPLQEHRNIPMQQAVESGAMALFGEK------- 654

Query: 161 ILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRI 220
                   + V + + G+  +LC G HV++TG +  +FK++   GA   G      ++R 
Sbjct: 655 ------YGDRVRMIQFGDSKELCGGTHVKNTGDI-WYFKIIS-EGAVAAGIRRIEAITRG 706

Query: 221 YGTAWNTQQELTQYLYFLEESEK--RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQT 278
               + T+QE  Q +  ++E+ K  +D  K  R     H+ E+ + +   H++  ++ + 
Sbjct: 707 GAMKYFTEQE--QLVEQIKETLKNAQDPVKAIR-----HLQEENAAL---HKELEQLRKE 756

Query: 279 LISYMRRKIKDDYEEINTPQVL 300
               ++  IK ++ E+N  Q L
Sbjct: 757 QAKQLKTSIKAEFTEVNGVQCL 778


>gi|123965286|ref|YP_001010367.1| alanyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515]
 gi|205830181|sp|A2BTZ9|SYA_PROM5 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|123199652|gb|ABM71260.1| Alanyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515]
          Length = 886

 Score = 38.5 bits (88), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 35/159 (22%), Positives = 70/159 (44%), Gaps = 24/159 (15%)

Query: 45  GKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGF 104
           G++C      R   +E    +  R+ A   H+  H++  A++ I  +     G ++  GF
Sbjct: 540 GEIC------RNQLVETRVDKFNRAKAESNHTATHLLQSALKLIIDKSVSQRGSLV--GF 591

Query: 105 ---YYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHE---KARELFESKKEAYK 158
               +DF+  QP S ++++Q+E  +   I+ + P   + +  +   KA  L    ++   
Sbjct: 592 NKLRFDFNSPQPLSKEQISQVESLVNSWISENHPIEVKNMDKDDALKAGALAMFGEKYGD 651

Query: 159 VEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
           +  +  +P          G   +LC G HV++T +V  F
Sbjct: 652 IVRVVDVP----------GVSMELCGGTHVQTTSEVGSF 680


>gi|322831421|ref|YP_004211448.1| alanyl-tRNA synthetase [Rahnella sp. Y9602]
 gi|321166622|gb|ADW72321.1| alanyl-tRNA synthetase [Rahnella sp. Y9602]
          Length = 875

 Score = 38.5 bits (88), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 29/132 (21%), Positives = 57/132 (43%), Gaps = 20/132 (15%)

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY-YDFDKEQPFSSDELAQIEKKMQEIIA 131
           + HS  H++  A++ +  +     G ++ D +  +DF   +    +E+ Q+E  +   I 
Sbjct: 562 LNHSATHLLHAALRQVLGKHVAQKGSLVNDNYLRFDFSHFEAMKPEEIRQVEDLVNAQIR 621

Query: 132 RDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRG 185
           R+ P     +  ++A+E     LF  K E             ++V +   G++  +LC G
Sbjct: 622 RNLPIQTTIMDLDEAKEKGAMALFGEKYE-------------DSVRVLSMGDFSTELCGG 668

Query: 186 PHVRSTGQVKKF 197
            H   TG +  F
Sbjct: 669 THASRTGDIGLF 680


>gi|297544523|ref|YP_003676825.1| alanyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|296842298|gb|ADH60814.1| alanyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 877

 Score = 38.5 bits (88), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 32/132 (24%), Positives = 61/132 (46%), Gaps = 10/132 (7%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKM 126
           R+ A   H+  H++ +A++ I  + V  A   + +D   +DF   Q  + +EL +IE ++
Sbjct: 556 RNNAARNHTATHLLHKALKEILGDHVHQAGSLVADDRLRFDFSHYQAVTKEELKKIENRV 615

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRG 185
            E I +    L  Y+  +   E  +    A   E        + V + R  ++  +LC G
Sbjct: 616 NEKIYQS---LNVYIEEKTYDEALKEGAVALFTE-----KYGDKVRVVRIDDYSVELCGG 667

Query: 186 PHVRSTGQVKKF 197
            HV++T ++  F
Sbjct: 668 THVKNTNEIGLF 679


>gi|291286777|ref|YP_003503593.1| alanyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
 gi|290883937|gb|ADD67637.1| alanyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
          Length = 877

 Score = 38.5 bits (88), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 20/127 (15%)

Query: 75  HSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           H+  HI+ +A+Q +  + V+ A   +  +   +DF+   P S++E+ +IE+   E I  +
Sbjct: 565 HTSTHILHKALQMVLGDHVRQAGSQVNPERLRFDFNHYAPVSAEEIMRIEEIANEEIQAN 624

Query: 134 SPFLKQYLS-----HEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF-DLCRGPH 187
           +   K Y++     +  A  LF  +K   KV ++E             G++  +LC G H
Sbjct: 625 TALKKTYMNIDDAVNSGAMALF-GEKYGNKVRVVEI------------GDFSKELCGGCH 671

Query: 188 VRSTGQV 194
           V  TG +
Sbjct: 672 VDRTGDI 678


>gi|90412109|ref|ZP_01220116.1| alanyl-tRNA synthetase [Photobacterium profundum 3TCK]
 gi|90327087|gb|EAS43466.1| alanyl-tRNA synthetase [Photobacterium profundum 3TCK]
          Length = 873

 Score = 38.5 bits (88), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 32/145 (22%), Positives = 63/145 (43%), Gaps = 21/145 (14%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKM 126
           R+   + HS  H++  A++++  E     G +++ D   +DF   +    ++L +IE+ +
Sbjct: 555 RAAITLNHSATHLLHSALRNLLGEHVAQKGSLVKADALRFDFSNLEAVKPEQLREIERVV 614

Query: 127 QEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEW-F 180
            E I  +       +  E A++     LF  K +             + V +   GE+  
Sbjct: 615 NEQIRLNHSIDTNIMDIESAKQKGAMALFGEKYD-------------DEVRVLSMGEFST 661

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAG 205
           +LC G H ++TG +   FK+    G
Sbjct: 662 ELCGGIHAKNTGDI-GLFKITSEGG 685


>gi|115486243|ref|NP_001068265.1| Os11g0610900 [Oryza sativa Japonica Group]
 gi|108864576|gb|ABA94784.2| seryl-tRNA synthetase family protein, expressed [Oryza sativa
           Japonica Group]
 gi|113645487|dbj|BAF28628.1| Os11g0610900 [Oryza sativa Japonica Group]
          Length = 509

 Score = 38.5 bits (88), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 38/164 (23%), Positives = 73/164 (44%), Gaps = 15/164 (9%)

Query: 244 RDHRKLAREMDLFHI--AEDGSGVIFWHRKGWKIF--QTLISYMRRKI-KDDYEEINTPQ 298
           RDH +L +E+DLF    A + SG  F++ K   +     L+++   ++ K  +  + TP+
Sbjct: 205 RDHLQLGKELDLFDFDAAAEVSGSKFYYLKNEAVLLEMALVNWAITEVSKKGFTPLITPE 264

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++   + ++ G     RA    V   D++ + L   A  P+       +    +    +L
Sbjct: 265 IVRSSVVEKCGFQP--RAQNTQVYSIDNSDQCLIGTAEIPVG-----GIHMDSILPDSDL 317

Query: 359 PVRLAEFGSVYRNE---PSGSLHGLMRVRGFTQDDAHVFCTKEQ 399
           P +   +   +R E      +  GL RV  F++ +  VFC  E+
Sbjct: 318 PRKYVAYSHCFRTEAGAAGAATRGLYRVHQFSKVEMFVFCRPEE 361


>gi|254245667|ref|ZP_04938988.1| Alanyl-tRNA synthetase, class IIc [Burkholderia cenocepacia PC184]
 gi|124870443|gb|EAY62159.1| Alanyl-tRNA synthetase, class IIc [Burkholderia cenocepacia PC184]
          Length = 897

 Score = 38.5 bits (88), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 31/129 (24%), Positives = 61/129 (47%), Gaps = 19/129 (14%)

Query: 75  HSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H+M +A++ +    VQ     +  D   +DF    P + DE+ ++E+ + + I  +
Sbjct: 587 HSATHLMHKALREVLGAHVQQKGSLVDADKTRFDFAHNAPMTDDEIRRVEQIVNDEILAN 646

Query: 134 SPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           +P + + + +++A +     LF  +K   +V +L+   ++E            LC G HV
Sbjct: 647 APGIVRVMPYDEAVKGGAMALF-GEKYGDEVRVLDLGFSRE------------LCGGTHV 693

Query: 189 RSTGQVKKF 197
             TG +  F
Sbjct: 694 HRTGDIGLF 702


>gi|319400957|gb|EFV89176.1| histidyl-tRNA synthetase [Staphylococcus epidermidis FRI909]
          Length = 424

 Score = 38.5 bits (88), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 20/82 (24%), Positives = 40/82 (48%)

Query: 557 VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASE 616
           V T+   A  YA ++ N L+ + + ++ D+ N  I  ++++         ++ GD+E   
Sbjct: 334 VVTMGEDADRYAVKLINDLRRNGIKVDKDYLNRKIKGQMKQADRLNAKYTVVIGDQELEN 393

Query: 617 RSIGIRRFGSTTTQKVSLLDAI 638
             IG++   S  T+ V L + I
Sbjct: 394 NEIGVKNMISGETENVQLDELI 415


>gi|291518572|emb|CBK73793.1| (p)ppGpp synthetase, RelA/SpoT family [Butyrivibrio fibrisolvens
           16/4]
          Length = 767

 Score = 38.5 bits (88), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 7/83 (8%)

Query: 3   SDIKLTF-PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IE 60
           SD    F P G +KN P  +T  D A SI  ++  + +   +NGK+  +   ++ G  IE
Sbjct: 421 SDTVFCFTPSGDVKNLPNGSTPIDFAYSIHSAVGNRMIGAKVNGKLVPIDYVIQNGDRIE 480

Query: 61  IITPEDPRS-----LAVIRHSCA 78
           I+T ++        L++++ S A
Sbjct: 481 IVTSQNTNGPSRDWLSIVKSSQA 503


>gi|289578243|ref|YP_003476870.1| alanyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
 gi|289527956|gb|ADD02308.1| alanyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
          Length = 877

 Score = 38.5 bits (88), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 32/132 (24%), Positives = 61/132 (46%), Gaps = 10/132 (7%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKM 126
           R+ A   H+  H++ +A++ I  + V  A   + +D   +DF   Q  + +EL +IE ++
Sbjct: 556 RNNAARNHTATHLLHKALKEILGDHVHQAGSLVADDRLRFDFSHYQAVTKEELKKIENRV 615

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRG 185
            E I +    L  Y+  +   E  +    A   E        + V + R  ++  +LC G
Sbjct: 616 NEKIYQS---LNVYIEEKTYDEALKEGAVALFTE-----KYGDKVRVVRIDDYSVELCGG 667

Query: 186 PHVRSTGQVKKF 197
            HV++T ++  F
Sbjct: 668 THVKNTNEIGLF 679


>gi|206890423|ref|YP_002248838.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
           synthetase I) ((P)ppGpp synthetase) [Thermodesulfovibrio
           yellowstonii DSM 11347]
 gi|206742361|gb|ACI21418.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
           synthetase I) ((P)ppGpp synthetase) [Thermodesulfovibrio
           yellowstonii DSM 11347]
          Length = 702

 Score = 38.5 bits (88), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 1/64 (1%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
           +P  I +  P G +K  PV++T  D A +I   +  +     +NG++  L+  ++ G  +
Sbjct: 380 VPDTIYIFTPKGDVKELPVNSTPVDFAYAIHSEVGARCAGAKVNGRIVPLNYQLQSGDVV 439

Query: 60  EIIT 63
           EIIT
Sbjct: 440 EIIT 443


>gi|219870706|ref|YP_002475081.1| alanyl-tRNA synthetase [Haemophilus parasuis SH0165]
 gi|219690910|gb|ACL32133.1| alanyl-tRNA synthetase [Haemophilus parasuis SH0165]
          Length = 875

 Score = 38.5 bits (88), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 28/135 (20%), Positives = 59/135 (43%), Gaps = 15/135 (11%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFSSDELAQIEK-- 124
           R    + HS  H++  A++ +  +     G ++ E+   +DF + +  S  +L +IE+  
Sbjct: 556 RHAITLNHSATHLLHSALRQVLGDHVAQKGSLVSENSLRFDFSQGEAISKADLEEIERII 615

Query: 125 --KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
             K++E I   +  +    + +K       +K   +V +++   A             +L
Sbjct: 616 NTKIRENIVVTTEVMDLESAKQKGAMALFGEKYGDRVRVVDMTAAFS----------VEL 665

Query: 183 CRGPHVRSTGQVKKF 197
           C G HV+ TG++  F
Sbjct: 666 CGGTHVKQTGEIGLF 680


>gi|332829293|gb|EGK01947.1| alanyl-tRNA synthetase [Dysgonomonas gadei ATCC BAA-286]
          Length = 872

 Score = 38.5 bits (88), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 32/135 (23%), Positives = 59/135 (43%), Gaps = 16/135 (11%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSDELAQIEK-- 124
           R+     H+  H++ E ++ I        G  +  G   +DF   Q  +  E+ ++E+  
Sbjct: 556 RTATECNHTATHLLHEGLREILGSHVEQKGSYVSPGVLRFDFSHFQKLTDKEIRKVERFV 615

Query: 125 --KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
             K++E IA D           + R +  S+ +A     L      ++V + R G+  +L
Sbjct: 616 TAKIRENIALD-----------EKRHVPISEAKAMGAMALFGEKYGDDVRVIRFGDSVEL 664

Query: 183 CRGPHVRSTGQVKKF 197
           C G H+ STG++  F
Sbjct: 665 CGGTHISSTGRIGSF 679


>gi|292487293|ref|YP_003530165.1| alanyl-tRNA synthetase [Erwinia amylovora CFBP1430]
 gi|292900336|ref|YP_003539705.1| alanyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
 gi|291200184|emb|CBJ47312.1| alanyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
 gi|291552712|emb|CBA19757.1| Alanyl-tRNA synthetase [Erwinia amylovora CFBP1430]
          Length = 876

 Score = 38.5 bits (88), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 29/135 (21%), Positives = 59/135 (43%), Gaps = 10/135 (7%)

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY-YDFDKEQPFSSDELAQIE 123
           E  R+   + HS  H++  A++ +  +     G ++ D +  +DF + +  +  E+ Q+E
Sbjct: 554 EARRARIRLNHSATHLLHAALRQVLGQHVSQKGSLVNDTYLRFDFSQFEAMTPQEMRQVE 613

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDL 182
           + +   I R+ P     +  E A+        A+    L      ++V +   G++  +L
Sbjct: 614 EIVNAQIRRNLPIETNIMELEAAK--------AHGAMALFGEKYDDHVRVLSMGDFSTEL 665

Query: 183 CRGPHVRSTGQVKKF 197
           C G H   TG +  F
Sbjct: 666 CGGTHASRTGDIGLF 680


>gi|198424783|ref|XP_002128963.1| PREDICTED: similar to mitochondrial ribosomal protein L39 [Ciona
           intestinalis]
          Length = 456

 Score = 38.5 bits (88), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 29/132 (21%), Positives = 58/132 (43%), Gaps = 13/132 (9%)

Query: 76  SCAHIMAEAVQSIW-----------PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           +C+ I+   VQ  +           PE+ V  G    D       ++     ++L  + K
Sbjct: 220 TCSVILGAVVQEAFKENQKIGLLKIPEISVKSGAFCYDLLLDPGMRDWEAREEDLVFMSK 279

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKV--EILESIPAKENVTLYRQGEWFDL 182
             + II+++  F K  +    A E+F+ +++      E+LE      ++ +YR GE+ D+
Sbjct: 280 VARRIISKNLKFEKLEMEAGIATEIFQEEEQKLNTIAELLEKNGQDSSIPVYRFGEYMDV 339

Query: 183 CRGPHVRSTGQV 194
             GP + +T  +
Sbjct: 340 IEGPLISNTSHI 351


>gi|156354212|ref|XP_001623294.1| predicted protein [Nematostella vectensis]
 gi|156209977|gb|EDO31194.1| predicted protein [Nematostella vectensis]
          Length = 73

 Score = 38.5 bits (88), Expect = 3.6,   Method: Composition-based stats.
 Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 4/65 (6%)

Query: 5  IKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG--SIEI 61
          IK+T PDG  I+      T  ++A SIS+ LA   V   +NG+V DL D V EG  S+++
Sbjct: 2  IKITLPDGKEIEGLSWKTTPYEIACSISQGLADNTVIAKVNGEVWDL-DRVLEGDCSLQL 60

Query: 62 ITPED 66
          +  +D
Sbjct: 61 LKFDD 65


>gi|150025983|ref|YP_001296809.1| alanyl-tRNA synthetase [Flavobacterium psychrophilum JIP02/86]
 gi|205830094|sp|A6H0Y3|SYA_FLAPJ RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|149772524|emb|CAL44007.1| Alanine--tRNA ligase [Flavobacterium psychrophilum JIP02/86]
          Length = 887

 Score = 38.5 bits (88), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 40/139 (28%), Positives = 60/139 (43%), Gaps = 24/139 (17%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDEL------- 119
           R+     HS  H+M  A++SI        G ++  D   +DF      S D+L       
Sbjct: 572 RASTSKNHSATHLMHLALRSILGTHVEQKGSLVNPDYLRFDFSHFSKVSDDQLRQVEASV 631

Query: 120 -AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
            AQIE ++Q    R+ P +K+ L  + A  LF  K               +NV +   GE
Sbjct: 632 NAQIEAQLQLTEHRNIP-IKEALD-KGAMALFGEK-------------YGDNVRMIEFGE 676

Query: 179 WFDLCRGPHVRSTGQVKKF 197
             +LC G HV++T Q+  F
Sbjct: 677 SKELCGGIHVKNTAQIWHF 695


>gi|254480113|ref|ZP_05093361.1| alanyl-tRNA synthetase [marine gamma proteobacterium HTCC2148]
 gi|214039675|gb|EEB80334.1| alanyl-tRNA synthetase [marine gamma proteobacterium HTCC2148]
          Length = 866

 Score = 38.5 bits (88), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 32/152 (21%), Positives = 69/152 (45%), Gaps = 11/152 (7%)

Query: 47  VCDLSDPVREGSI-EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGF 104
           V  L+  +R+G I   +  +  R    + HS  H++  A++S+  +     G +++ +  
Sbjct: 523 VNTLTGTIRQGDIVHSVVDDSLRQRTRLNHSATHLLHSALRSVLGDHVQQKGSLVDSERL 582

Query: 105 YYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESK--KEAYKVEIL 162
            +DF   +  + +EL +IE  + + +  ++    + +S ++A E   +    E Y  E+ 
Sbjct: 583 RFDFSHFEGVTGEELKRIESIVNDQVRANTEVSTRVMSMDEAIEAGATALFGEKYGDEV- 641

Query: 163 ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQV 194
                   +++   G   +LC G HV  TG +
Sbjct: 642 ------RVLSMGEAGFSVELCGGTHVARTGDI 667


>gi|167855110|ref|ZP_02477882.1| alanyl-tRNA synthetase [Haemophilus parasuis 29755]
 gi|167853745|gb|EDS24987.1| alanyl-tRNA synthetase [Haemophilus parasuis 29755]
          Length = 853

 Score = 38.5 bits (88), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 30/135 (22%), Positives = 62/135 (45%), Gaps = 15/135 (11%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFSSDELAQIEK-- 124
           R    + HS  H++  A++ +  +     G ++ E+   +DF + +  S  +L +IE+  
Sbjct: 534 RHAITLNHSATHLLHSALRQVLGDHVAQKGSLVSENSLRFDFSQGEAISKADLEEIERII 593

Query: 125 --KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
             K++E I   +  +    + +K       +K   +V +++ I A  +V         +L
Sbjct: 594 NTKIRENIVVTTEVMDLESAKQKGAMALFGEKYGDRVRVVD-ITAAFSV---------EL 643

Query: 183 CRGPHVRSTGQVKKF 197
           C G HV+ TG++  F
Sbjct: 644 CGGTHVKQTGEIGLF 658


>gi|116515089|ref|YP_802718.1| prolyl-tRNA synthetase [Buchnera aphidicola str. Cc (Cinara cedri)]
 gi|116256943|gb|ABJ90625.1| prolyl-tRNA synthetase [Buchnera aphidicola str. Cc (Cinara cedri)]
          Length = 422

 Score = 38.5 bits (88), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 30/139 (21%), Positives = 61/139 (43%), Gaps = 7/139 (5%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           EI  P +  ++LW++SG     R  ++  +    T +  + + L P +      +    +
Sbjct: 68  EICMPIIQPENLWKKSG-----RKKLYGEELIKITDRRNKKYVLSPTHEEAINYICQQEI 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLI 411
            SY++LP+   +    +R+E      G++R   F   DA+ F   K+ +      + N+ 
Sbjct: 123 HSYKQLPITFYQIQKKFRDEIRPRF-GVIRTIEFLMKDAYSFHINKDSLKKTYENMKNIY 181

Query: 412 ISIYKDFGFEKIMVKLSTR 430
           I I+K       +VK  ++
Sbjct: 182 IKIFKKLKLNFKIVKAHSK 200


>gi|319789117|ref|YP_004150750.1| (p)ppGpp synthetase I, SpoT/RelA [Thermovibrio ammonificans HB-1]
 gi|317113619|gb|ADU96109.1| (p)ppGpp synthetase I, SpoT/RelA [Thermovibrio ammonificans HB-1]
          Length = 717

 Score = 38.5 bits (88), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 1/61 (1%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEII 62
           +I +  P G IK  PV AT  D A ++  S+  +  A  +NGK+  L+  ++ G  +EII
Sbjct: 387 NIYVFTPKGDIKTLPVGATPVDFAYAVHTSVGHRCRAAKVNGKLVPLNYRLQSGDRVEII 446

Query: 63  T 63
           T
Sbjct: 447 T 447


>gi|166031162|ref|ZP_02233991.1| hypothetical protein DORFOR_00848 [Dorea formicigenerans ATCC
           27755]
 gi|166029009|gb|EDR47766.1| hypothetical protein DORFOR_00848 [Dorea formicigenerans ATCC
           27755]
          Length = 803

 Score = 38.5 bits (88), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 1/67 (1%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEII 62
           D+    P G +K  P  +T  D A SI  ++  K V   +NGK+  +   ++ G  IEI+
Sbjct: 459 DVYCFTPQGDVKTLPTGSTPIDFAYSIHSAVGNKMVGARVNGKLVPIDYRIQNGDRIEIL 518

Query: 63  TPEDPRS 69
           T ++ + 
Sbjct: 519 TSQNSKG 525


>gi|254391331|ref|ZP_05006535.1| alanyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|197705022|gb|EDY50834.1| alanyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
          Length = 869

 Score = 38.5 bits (88), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 40/162 (24%), Positives = 69/162 (42%), Gaps = 15/162 (9%)

Query: 68  RSLAVIR-HSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSDELAQIEKK 125
           R  A+ R HS  H+  +A++          G     G F +DF          L  +E++
Sbjct: 566 RRRAIARAHSATHLTHQALRDALGPTAAQAGSENSPGRFRFDFGAPSAVPGSVLTDVEQR 625

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF-DLCR 184
           + E+++R+     + +S      L E+KK+    E  E     E V +   G++  +LC 
Sbjct: 626 INEVLSRELDVQAEVMS------LDEAKKQGAIAEFGEKY--GERVRVVTIGDFSKELCG 677

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWN 226
           G HV +T Q      L+K+ G    G   R + + +   A+N
Sbjct: 678 GTHVHNTAQ----LGLVKLLGESSIGSGVRRIEALVGVDAYN 715


>gi|169841321|ref|ZP_02874434.1| threonyl-tRNA synthetase [candidate division TM7 single-cell
           isolate TM7a]
          Length = 53

 Score = 38.5 bits (88), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 1/45 (2%)

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
           +L    Y  FGFE   ++LST+P+K +GSD +W+ AE  +K  L+
Sbjct: 1   DLYDKFYTLFGFE-YHIELSTKPDKAIGSDEIWEMAEANLKSALE 44


>gi|282901157|ref|ZP_06309088.1| Alanyl-tRNA synthetase, class IIc [Cylindrospermopsis raciborskii
           CS-505]
 gi|281193989|gb|EFA68955.1| Alanyl-tRNA synthetase, class IIc [Cylindrospermopsis raciborskii
           CS-505]
          Length = 878

 Score = 38.5 bits (88), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 36/143 (25%), Positives = 63/143 (44%), Gaps = 17/143 (11%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKM 126
           R  A   H+  H++  A++ I  E     G ++  D   +DF+  +  + DE+ Q+E  +
Sbjct: 557 RRRAQANHTATHLLQAALKKIVDEGISQAGSLVSFDRLRFDFNCPKSLTEDEVQQVEDLV 616

Query: 127 QEIIARDSPFLKQYLS--HEKARELFESKKEAY--KVEILESIPAKENVTLYRQGEWFDL 182
              I++  P   + L     KAR       E Y  +V +++  P          G   +L
Sbjct: 617 NAWISQAHPAQVEILPLPEAKARGAVAMFGEKYGDQVRVID-FP----------GVSMEL 665

Query: 183 CRGPHVRSTGQVKKFFKLMKVAG 205
           C G HV +TG++   FK++   G
Sbjct: 666 CGGTHVNNTGEI-GVFKIISQVG 687


>gi|239608018|gb|EEQ85005.1| prolyl-tRNA synthetase [Ajellomyces dermatitidis ER-3]
          Length = 555

 Score = 38.5 bits (88), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 7/93 (7%)

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           Q LW++SG     + +    K  D   K+ R F L P +     ++    + SYR+LP+R
Sbjct: 36  QALWEKSGR---LKKDSEFFKFQDR--KEAR-FLLAPTHEEEITSLVAGAVNSYRDLPLR 89

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           + +    YR+EP     GL+R R F   D + F
Sbjct: 90  VYQISRKYRDEPR-PRQGLLRGREFIMKDLYTF 121


>gi|261200038|ref|XP_002626420.1| prolyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
 gi|239594628|gb|EEQ77209.1| prolyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
          Length = 555

 Score = 38.5 bits (88), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 7/93 (7%)

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           Q LW++SG     + +    K  D   K+ R F L P +     ++    + SYR+LP+R
Sbjct: 36  QALWEKSGR---LKKDSEFFKFQDR--KEAR-FLLAPTHEEEITSLVAGAVNSYRDLPLR 89

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           + +    YR+EP     GL+R R F   D + F
Sbjct: 90  VYQISRKYRDEPR-PRQGLLRGREFIMKDLYTF 121


>gi|168204879|ref|ZP_02630884.1| GTP pyrophosphokinase [Clostridium perfringens E str. JGS1987]
 gi|170663656|gb|EDT16339.1| GTP pyrophosphokinase [Clostridium perfringens E str. JGS1987]
          Length = 726

 Score = 38.5 bits (88), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 1/60 (1%)

Query: 10  PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI-EIITPEDPR 68
           P G + N P  AT  D A  I   +  K V   +NGK+  L   ++ G I EI+T    R
Sbjct: 394 PKGVVINLPAGATPIDFAYKIHTDIGNKCVGAKVNGKIVTLDYKLKTGEIVEILTSSSSR 453


>gi|220931419|ref|YP_002508327.1| alanyl-tRNA synthetase [Halothermothrix orenii H 168]
 gi|219992729|gb|ACL69332.1| alanyl-tRNA synthetase [Halothermothrix orenii H 168]
          Length = 876

 Score = 38.5 bits (88), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 32/141 (22%), Positives = 61/141 (43%), Gaps = 10/141 (7%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSD 117
           +E    E+ R      HS  H++ + ++ +  +     G ++  D   +DF    P + +
Sbjct: 547 VEARVDEELRYNIARNHSTTHLLHKTLKEVLGDHVNQSGSLVAPDRLRFDFSHYAPLTEE 606

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           E+ +IE  + E I  + P     +  EKA+E+        K   +        V + + G
Sbjct: 607 EINRIEDTVNEKILSNLPVEILEMPFEKAKEMGAVALFGEKYGHI--------VRVVKIG 658

Query: 178 EW-FDLCRGPHVRSTGQVKKF 197
           ++  +LC G HV  TG++  F
Sbjct: 659 DYSIELCGGTHVDRTGEIGSF 679


>gi|319400948|gb|EFV89167.1| alanyl-tRNA synthetase [Staphylococcus epidermidis FRI909]
          Length = 876

 Score = 38.5 bits (88), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 37/178 (20%), Positives = 75/178 (42%), Gaps = 22/178 (12%)

Query: 39  VAVAINGK-----VCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQ 93
           V  A NG+     +    +  +   +E    ++ R L    HS  H++  A++ +  +  
Sbjct: 524 VTKAPNGQNLHKGIVQFGEATQNAKVEARVNKEDRRLIQKNHSATHLLHAALKEVLGDHV 583

Query: 94  VAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKAREL--- 149
              G ++E +   +DF    P + +E+  +E+++ E I R      Q +S E+A+ +   
Sbjct: 584 NQAGSLVEPERLRFDFSHFGPMTQEEINLVERRVNEEIWRAIDVRIQEMSIEEAKSIGAM 643

Query: 150 -FESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGA 206
               +K    V ++   P              +LC G HV +T ++   FK++  +G 
Sbjct: 644 ALFGEKYGDIVRVVNMAPFS-----------IELCGGIHVNNTAEI-GLFKIVSESGT 689


>gi|312069509|ref|XP_003137715.1| alanyl-tRNA synthetase [Loa loa]
 gi|307767125|gb|EFO26359.1| alanyl-tRNA synthetase [Loa loa]
          Length = 967

 Score = 38.5 bits (88), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 29/143 (20%), Positives = 66/143 (46%), Gaps = 10/143 (6%)

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           E+ R+L +  H+  H++  A++ +  EV+     +  D   +D   +QP + +++  +E+
Sbjct: 594 EERRNLIMKNHTGTHVLNFALRKVVGEVEQKGSLVAPDRLRFDLTSKQPLTYEQIKIVEE 653

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESK---KEAY--KVEILESIPAKENVTLYRQGEW 179
           + Q +I  ++    +     +AR++   +   +EAY   V I+      E +   + G+ 
Sbjct: 654 ESQMLIDTNATVFAKNAPLAEARQINGLRAVFEEAYPDPVRIVSVGVPIEELLKDKDGDL 713

Query: 180 -----FDLCRGPHVRSTGQVKKF 197
                 + C G H+ + G + K 
Sbjct: 714 AVNTAVEFCGGTHLHNVGHIGKL 736


>gi|294811565|ref|ZP_06770208.1| Alanyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|326440050|ref|ZP_08214784.1| alanyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|294324164|gb|EFG05807.1| Alanyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
          Length = 889

 Score = 38.5 bits (88), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 40/162 (24%), Positives = 69/162 (42%), Gaps = 15/162 (9%)

Query: 68  RSLAVIR-HSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSDELAQIEKK 125
           R  A+ R HS  H+  +A++          G     G F +DF          L  +E++
Sbjct: 565 RRRAIARAHSATHLTHQALRDALGPTAAQAGSENSPGRFRFDFGAPSAVPGSVLTDVEQR 624

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF-DLCR 184
           + E+++R+     + +S      L E+KK+    E  E     E V +   G++  +LC 
Sbjct: 625 INEVLSRELDVQAEVMS------LDEAKKQGAIAEFGEKY--GERVRVVTIGDFSKELCG 676

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWN 226
           G HV +T Q      L+K+ G    G   R + + +   A+N
Sbjct: 677 GTHVHNTAQ----LGLVKLLGESSIGSGVRRIEALVGVDAYN 714


>gi|269101880|ref|ZP_06154577.1| alanyl-tRNA synthetase [Photobacterium damselae subsp. damselae CIP
           102761]
 gi|268161778|gb|EEZ40274.1| alanyl-tRNA synthetase [Photobacterium damselae subsp. damselae CIP
           102761]
          Length = 873

 Score = 38.5 bits (88), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 37/173 (21%), Positives = 72/173 (41%), Gaps = 33/173 (19%)

Query: 40  AVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPI 99
           A+ +  K+    D VR G+I +             HS  H+M  A++ +  E     G +
Sbjct: 539 ALKVGDKLAATVDHVRRGAISL------------NHSATHLMHAALRKLLGEHVAQKGSL 586

Query: 100 IE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESK 153
           ++ D   +DF   +    ++L ++E+ + + I  +     + +  E A+E     LF  K
Sbjct: 587 VKPDSLRFDFSHLEAVKPEQLREVERMVNDQIRLNHAIDTEIMDIEAAKEKGAMALFGEK 646

Query: 154 KEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKFFKLMKVAG 205
            +             + V +   G++  +LC G H + TG +   FK++   G
Sbjct: 647 YD-------------DQVRVLSMGDFSTELCGGIHAKRTGDI-GLFKIVSEGG 685


>gi|227504988|ref|ZP_03935037.1| GTP pyrophosphokinase [Corynebacterium striatum ATCC 6940]
 gi|227198438|gb|EEI78486.1| GTP pyrophosphokinase [Corynebacterium striatum ATCC 6940]
          Length = 750

 Score = 38.5 bits (88), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 1/61 (1%)

Query: 10  PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPEDPR 68
           P G + N P  +T  D A ++   +  + +   +NGK+  L   ++ G  +EI T +DP 
Sbjct: 412 PKGDVVNLPAGSTPVDFAYAVHTEVGHRCIGAKVNGKLVALESELKSGDKVEIFTSKDPN 471

Query: 69  S 69
           +
Sbjct: 472 A 472


>gi|170701933|ref|ZP_02892858.1| alanyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
 gi|170133166|gb|EDT01569.1| alanyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
          Length = 874

 Score = 38.5 bits (88), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 33/137 (24%), Positives = 65/137 (47%), Gaps = 20/137 (14%)

Query: 75  HSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H+M +A++ +    VQ     +  +   +DF    P + DE+ ++E+ +   I  +
Sbjct: 564 HSATHLMHKALREVLGAHVQQKGSLVDAEKTRFDFAHNAPMTDDEIRRVEQIVNNEILAN 623

Query: 134 SPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           +P + + + +++A +     LF  +K   +V +L+   ++E            LC G HV
Sbjct: 624 APGIVRVMPYDEAVKGGAMALF-GEKYGDEVRVLDLGFSRE------------LCGGTHV 670

Query: 189 RSTGQVKKFFKLMKVAG 205
             TG +  FFK++   G
Sbjct: 671 HRTGDI-GFFKIVVEGG 686


>gi|94676688|ref|YP_588660.1| alanyl-tRNA synthetase [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
 gi|205829990|sp|Q1LTQ4|SYA_BAUCH RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|94219838|gb|ABF13997.1| alanyl-tRNA synthetase [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
          Length = 884

 Score = 38.5 bits (88), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 25/128 (19%), Positives = 57/128 (44%), Gaps = 9/128 (7%)

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY-YDFDKEQPFSSDELAQIEKKMQEIIA 131
           + HS  H++  A++ +  +  V  G ++ D +  +DF   Q    +++ ++EK + + I 
Sbjct: 561 VNHSATHLLQSALRQLLGKHVVQRGSLVHDQYLRFDFSHHQAMQVEQIHEVEKIINQQIR 620

Query: 132 RDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRS 190
           R+       ++        E+ +    + +L+       V +   G++  +LC G H   
Sbjct: 621 RNLIIKTDMMT-------LEAAQNQGAISVLDHQYESSQVRVLSIGDFSTELCCGTHASR 673

Query: 191 TGQVKKFF 198
           TG +  F+
Sbjct: 674 TGDIGLFW 681


>gi|255027747|ref|ZP_05299733.1| prolyl-tRNA synthetase [Listeria monocytogenes FSL J2-003]
          Length = 90

 Score = 38.5 bits (88), Expect = 3.9,   Method: Composition-based stats.
 Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 5/72 (6%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +    LWQ+SG W+ Y   +  +K      +  R FAL P +     A+    +
Sbjct: 20  ELLMPALQPAELWQESGRWNDYGPELMRLK-----DRASRDFALGPTHEEVITALLRDEV 74

Query: 353 KSYRELPVRLAE 364
           KSY+ LP+ L +
Sbjct: 75  KSYKRLPLTLYQ 86


>gi|169343681|ref|ZP_02864680.1| GTP pyrophosphokinase [Clostridium perfringens C str. JGS1495]
 gi|169298241|gb|EDS80331.1| GTP pyrophosphokinase [Clostridium perfringens C str. JGS1495]
          Length = 726

 Score = 38.5 bits (88), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 1/60 (1%)

Query: 10  PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI-EIITPEDPR 68
           P G + N P  AT  D A  I   +  K V   +NGK+  L   ++ G I EI+T    R
Sbjct: 394 PKGVVINLPAGATPIDFAYKIHTDIGNKCVGAKVNGKIVTLDYKLKTGEIVEILTSSSSR 453


>gi|224825848|ref|ZP_03698952.1| alanyl-tRNA synthetase [Lutiella nitroferrum 2002]
 gi|224602072|gb|EEG08251.1| alanyl-tRNA synthetase [Lutiella nitroferrum 2002]
          Length = 877

 Score = 38.5 bits (88), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 33/141 (23%), Positives = 65/141 (46%), Gaps = 12/141 (8%)

Query: 68  RSLAVIR-HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKK 125
           + LA  R HS  H++  A++ +        G ++  +   +DF   +P S  ++A+IE+ 
Sbjct: 557 KRLATARNHSATHLLHAALRHVLGSHVAQKGSLVNAERTRFDFAHGEPVSVAQIAEIERV 616

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCR 184
           +  I+  +       ++++ A         A  + +       E V + + GE+  +LC 
Sbjct: 617 VNRIVLHNVEVSANVMAYDDA-------IRAGAIALFGEKYGDE-VRVLKMGEFSTELCG 668

Query: 185 GPHVRSTGQVKKFFKLMKVAG 205
           G HV+ TG +  FFK++   G
Sbjct: 669 GTHVKRTGDI-GFFKIVAEGG 688


>gi|182624408|ref|ZP_02952192.1| GTP pyrophosphokinase [Clostridium perfringens D str. JGS1721]
 gi|177910411|gb|EDT72788.1| GTP pyrophosphokinase [Clostridium perfringens D str. JGS1721]
          Length = 726

 Score = 38.5 bits (88), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 1/60 (1%)

Query: 10  PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI-EIITPEDPR 68
           P G + N P  AT  D A  I   +  K V   +NGK+  L   ++ G I EI+T    R
Sbjct: 394 PKGVVINLPAGATPIDFAYKIHTDIGNKCVGAKVNGKIVTLDYKLKTGEIVEILTSSSSR 453


>gi|168214142|ref|ZP_02639767.1| GTP pyrophosphokinase [Clostridium perfringens CPE str. F4969]
 gi|168215563|ref|ZP_02641188.1| GTP pyrophosphokinase [Clostridium perfringens NCTC 8239]
 gi|170714350|gb|EDT26532.1| GTP pyrophosphokinase [Clostridium perfringens CPE str. F4969]
 gi|182382330|gb|EDT79809.1| GTP pyrophosphokinase [Clostridium perfringens NCTC 8239]
          Length = 726

 Score = 38.5 bits (88), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 1/60 (1%)

Query: 10  PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI-EIITPEDPR 68
           P G + N P  AT  D A  I   +  K V   +NGK+  L   ++ G I EI+T    R
Sbjct: 394 PKGVVINLPAGATPIDFAYKIHTDIGNKCVGAKVNGKIVTLDYKLKTGEIVEILTSSSSR 453


>gi|18310920|ref|NP_562854.1| GTP pyrophosphokinase [Clostridium perfringens str. 13]
 gi|18145602|dbj|BAB81644.1| GTP pyrophosphokinase [Clostridium perfringens str. 13]
          Length = 726

 Score = 38.5 bits (88), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 1/60 (1%)

Query: 10  PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI-EIITPEDPR 68
           P G + N P  AT  D A  I   +  K V   +NGK+  L   ++ G I EI+T    R
Sbjct: 394 PKGVVINLPAGATPIDFAYKIHTDIGNKCVGAKVNGKIVTLDYKLKTGEIVEILTSSSSR 453


>gi|170732737|ref|YP_001764684.1| alanyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
 gi|205830047|sp|B1K026|SYA_BURCC RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|169815979|gb|ACA90562.1| alanyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
          Length = 874

 Score = 38.5 bits (88), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 31/129 (24%), Positives = 61/129 (47%), Gaps = 19/129 (14%)

Query: 75  HSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H+M +A++ +    VQ     +  D   +DF    P + DE+ ++E+ + + I  +
Sbjct: 564 HSATHLMHKALREVLGAHVQQKGSLVDADKTRFDFAHNAPMTDDEIRRVEQIVNDEILAN 623

Query: 134 SPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           +P + + + +++A +     LF  +K   +V +L+   ++E            LC G HV
Sbjct: 624 APGIVRVMPYDEAVKGGAMALF-GEKYGDEVRVLDLGFSRE------------LCGGTHV 670

Query: 189 RSTGQVKKF 197
             TG +  F
Sbjct: 671 HRTGDIGLF 679


>gi|294142849|ref|YP_003558827.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
           [Shewanella violacea DSS12]
 gi|293329318|dbj|BAJ04049.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
           [Shewanella violacea DSS12]
          Length = 701

 Score = 38.5 bits (88), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 1/68 (1%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIE 60
           P +I +  P+G I   PV AT  D A  +   +    V   +N +   LS P+  G +IE
Sbjct: 387 PEEIYVFTPEGRILELPVGATPVDFAYEVHTDVGTTCVGARVNRQAYPLSQPLISGQTIE 446

Query: 61  IITPEDPR 68
           IIT +  R
Sbjct: 447 IITAKGAR 454


>gi|253578285|ref|ZP_04855557.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251850603|gb|EES78561.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 776

 Score = 38.5 bits (88), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 1/60 (1%)

Query: 10  PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPEDPR 68
           P G +K  P  +T  D A S+  ++  K V   +NGK+  +   ++ G  IEIIT ++ +
Sbjct: 440 PQGDVKTLPSGSTPVDFAYSVHSAVGNKMVGARVNGKLVPIEYEIKNGDRIEIITSQNSQ 499


>gi|317475197|ref|ZP_07934464.1| tRNA synthetase class II [Bacteroides eggerthii 1_2_48FAA]
 gi|316908650|gb|EFV30337.1| tRNA synthetase class II [Bacteroides eggerthii 1_2_48FAA]
          Length = 873

 Score = 38.5 bits (88), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 32/132 (24%), Positives = 59/132 (44%), Gaps = 12/132 (9%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEK 124
           D R+     HS  H++  A++ +  +     G ++  D   +DF   Q  + +E+ Q+E 
Sbjct: 554 DKRAACAANHSATHLLDAALREVLGDHVEQKGSLVNSDSLRFDFSHFQKVTDEEIRQVEH 613

Query: 125 KMQEIIARDSPFLKQY--LSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
            +   I  + P LK+Y  +  E+A+EL            L      ++V + + G   + 
Sbjct: 614 IVNAKIRANIP-LKEYRNIPIEEAKEL--------GAIALFGEKYGDHVRVIQFGSSIEF 664

Query: 183 CRGPHVRSTGQV 194
           C G HV +TG +
Sbjct: 665 CGGTHVAATGNI 676


>gi|126663290|ref|ZP_01734288.1| alanine--tRNA ligase (alanyl-tRNA synthetase) [Flavobacteria
           bacterium BAL38]
 gi|126624948|gb|EAZ95638.1| alanine--tRNA ligase (alanyl-tRNA synthetase) [Flavobacteria
           bacterium BAL38]
          Length = 878

 Score = 38.5 bits (88), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 62/141 (43%), Gaps = 24/141 (17%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY-YDFDKEQPFSSDEL----- 119
           D R+     HS  H+M  A+++I        G ++   +  +DF      S DEL     
Sbjct: 561 DLRTSTSKNHSATHLMHLALRTILGTHVEQKGSLVNPNYLRFDFSHFSKVSDDELRQVEA 620

Query: 120 ---AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
              AQIE ++Q +  R+ P +K+ L  + A  LF  K               +NV +   
Sbjct: 621 SVNAQIEAQLQLVEHRNIP-IKEALD-KGAMALFGEK-------------YGDNVRMIEF 665

Query: 177 GEWFDLCRGPHVRSTGQVKKF 197
           G+  +LC G HV++T ++  F
Sbjct: 666 GDSKELCGGIHVKNTAEIWHF 686


>gi|167950024|ref|ZP_02537098.1| alanyl-tRNA synthetase [Endoriftia persephone 'Hot96_1+Hot96_2']
 gi|110589400|gb|ABG77209.1| alanyl-tRNA synthetase [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 167

 Score = 38.5 bits (88), Expect = 4.0,   Method: Composition-based stats.
 Identities = 23/101 (22%), Positives = 50/101 (49%), Gaps = 7/101 (6%)

Query: 54  VREGSIEIITPEDP------RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYY 106
           + EGS+ +  P         R    + HS  H++  A++ +  +     G +++D    +
Sbjct: 29  LEEGSLAVGDPVTAEVNAFTRQATALNHSATHLLHAALREVLGDHVAQKGSLVDDERLRF 88

Query: 107 DFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKAR 147
           DF + +P S ++L ++E+++ E I ++     + +S E AR
Sbjct: 89  DFSQFEPVSREQLQRVEQRVNEQIRQNHMVETRIMSLEDAR 129


>gi|218129222|ref|ZP_03458026.1| hypothetical protein BACEGG_00798 [Bacteroides eggerthii DSM 20697]
 gi|217988600|gb|EEC54920.1| hypothetical protein BACEGG_00798 [Bacteroides eggerthii DSM 20697]
          Length = 873

 Score = 38.5 bits (88), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 32/132 (24%), Positives = 59/132 (44%), Gaps = 12/132 (9%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEK 124
           D R+     HS  H++  A++ +  +     G ++  D   +DF   Q  + +E+ Q+E 
Sbjct: 554 DKRAACAANHSATHLLDAALREVLGDHVEQKGSLVNSDSLRFDFSHFQKVTDEEIRQVEH 613

Query: 125 KMQEIIARDSPFLKQY--LSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
            +   I  + P LK+Y  +  E+A+EL            L      ++V + + G   + 
Sbjct: 614 IVNAKIRANIP-LKEYRNIPIEEAKEL--------GAIALFGEKYGDHVRVIQFGSSIEF 664

Query: 183 CRGPHVRSTGQV 194
           C G HV +TG +
Sbjct: 665 CGGTHVAATGNI 676


>gi|168208638|ref|ZP_02634263.1| GTP pyrophosphokinase [Clostridium perfringens B str. ATCC 3626]
 gi|170712986|gb|EDT25168.1| GTP pyrophosphokinase [Clostridium perfringens B str. ATCC 3626]
          Length = 726

 Score = 38.5 bits (88), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 1/60 (1%)

Query: 10  PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI-EIITPEDPR 68
           P G + N P  AT  D A  I   +  K V   +NGK+  L   ++ G I EI+T    R
Sbjct: 394 PKGVVINLPAGATPIDFAYKIHTDIGNKCVGAKVNGKIVTLDYKLKTGEIVEILTSSSSR 453


>gi|163750721|ref|ZP_02157957.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
           [Shewanella benthica KT99]
 gi|161329565|gb|EDQ00557.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
           [Shewanella benthica KT99]
          Length = 701

 Score = 38.5 bits (88), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 1/68 (1%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIE 60
           P +I +  P+G I   PV AT  D A  +   +    V   +N +   LS P+  G +IE
Sbjct: 387 PEEIYVFTPEGRILELPVGATPVDFAYEVHTDVGNTCVGARVNRQAYPLSQPLISGQTIE 446

Query: 61  IITPEDPR 68
           IIT +  R
Sbjct: 447 IITAKGAR 454


>gi|27468219|ref|NP_764856.1| alanyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
 gi|57867101|ref|YP_188758.1| alanyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|251811025|ref|ZP_04825498.1| alanyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
 gi|282875956|ref|ZP_06284823.1| alanine--tRNA ligase [Staphylococcus epidermidis SK135]
 gi|33301694|sp|Q8CSA7|SYA_STAES RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|71153555|sp|Q5HNT2|SYA_STAEQ RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|27315765|gb|AAO04900.1|AE016748_134 alanyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
 gi|57637759|gb|AAW54547.1| alanyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|251805443|gb|EES58100.1| alanyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
 gi|281294981|gb|EFA87508.1| alanine--tRNA ligase [Staphylococcus epidermidis SK135]
          Length = 876

 Score = 38.5 bits (88), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 37/178 (20%), Positives = 75/178 (42%), Gaps = 22/178 (12%)

Query: 39  VAVAINGK-----VCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQ 93
           V  A NG+     +    +  +   +E    ++ R L    HS  H++  A++ +  +  
Sbjct: 524 VTKAPNGQNLHKGIVQFGEATQNAKVEARVNKEDRRLIQKNHSATHLLHAALKEVLGDHV 583

Query: 94  VAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKAREL--- 149
              G ++E +   +DF    P + +E+  +E+++ E I R      Q +S E+A+ +   
Sbjct: 584 NQAGSLVEPERLRFDFSHFGPMTQEEINLVERRVNEEIWRAIDVRIQEMSIEEAKSIGAM 643

Query: 150 -FESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGA 206
               +K    V ++   P              +LC G HV +T ++   FK++  +G 
Sbjct: 644 ALFGEKYGDIVRVVNMAPFS-----------IELCGGIHVNNTAEI-GLFKIVSESGT 689


>gi|320593705|gb|EFX06114.1| prolyl-tRNA synthetase [Grosmannia clavigera kw1407]
          Length = 495

 Score = 38.5 bits (88), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 31/136 (22%), Positives = 59/136 (43%), Gaps = 10/136 (7%)

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SG   S +  +F  +      +    F L P +      +    + SYR+LP+RL 
Sbjct: 124 LWERSGRLGSVKPELFQFE-----DRKQAKFLLAPTHEEEITELVAQSVHSYRDLPLRLY 178

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEK 422
           +    YR+E     +G++R R F   D + F  T E       ++     +I+ +    +
Sbjct: 179 QITRKYRDEMR-PRYGILRSREFIMKDLYTFDTTVEAALATYEQVRAAYAAIFAEL---R 234

Query: 423 IMVKLSTRPEKRVGSD 438
           + V+++      +G D
Sbjct: 235 VPVRVARASSGDMGGD 250


>gi|256377710|ref|YP_003101370.1| hypothetical protein Amir_3637 [Actinosynnema mirum DSM 43827]
 gi|255922013|gb|ACU37524.1| hypothetical protein Amir_3637 [Actinosynnema mirum DSM 43827]
          Length = 633

 Score = 38.5 bits (88), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 8/72 (11%)

Query: 25  DVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITP------EDPRSLAVIRHSC 77
           + AE++ RSL  + V V   G  C  +  VR G  + I+ P        P + A++RH C
Sbjct: 119 EAAEAV-RSLGGRVVPVVEFGSTCREAFTVRAGGRVRIVLPYGVLALPRPEASALLRHEC 177

Query: 78  AHIMAEAVQSIW 89
           AH+ A  V  +W
Sbjct: 178 AHVAAGDVDRVW 189


>gi|110798612|ref|YP_696617.1| GTP pyrophosphokinase [Clostridium perfringens ATCC 13124]
 gi|110673259|gb|ABG82246.1| GTP pyrophosphokinase [Clostridium perfringens ATCC 13124]
          Length = 726

 Score = 38.5 bits (88), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 1/60 (1%)

Query: 10  PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI-EIITPEDPR 68
           P G + N P  AT  D A  I   +  K V   +NGK+  L   ++ G I EI+T    R
Sbjct: 394 PKGVVINLPAGATPIDFAYKIHTDIGNKCVGAKVNGKIVTLDYKLKTGEIVEILTSSSSR 453


>gi|293366424|ref|ZP_06613102.1| alanine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|291319458|gb|EFE59826.1| alanine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|329735187|gb|EGG71479.1| alanine--tRNA ligase [Staphylococcus epidermidis VCU045]
          Length = 876

 Score = 38.5 bits (88), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 37/178 (20%), Positives = 75/178 (42%), Gaps = 22/178 (12%)

Query: 39  VAVAINGK-----VCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQ 93
           V  A NG+     +    +  +   +E    ++ R L    HS  H++  A++ +  +  
Sbjct: 524 VTKAPNGQNLHKGIVQFGEATQNAKVEARVNKEDRRLIQKNHSATHLLHAALKEVLGDHV 583

Query: 94  VAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKAREL--- 149
              G ++E +   +DF    P + +E+  +E+++ E I R      Q +S E+A+ +   
Sbjct: 584 NQAGSLVEPERLRFDFSHFGPMTQEEINLVERRVNEEIWRAIDVRIQEMSIEEAKSIGAM 643

Query: 150 -FESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGA 206
               +K    V ++   P              +LC G HV +T ++   FK++  +G 
Sbjct: 644 ALFGEKYGDIVRVVNMAPFS-----------IELCGGIHVNNTAEI-GLFKIVSESGT 689


>gi|171321470|ref|ZP_02910415.1| alanyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
 gi|171093253|gb|EDT38456.1| alanyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
          Length = 874

 Score = 38.5 bits (88), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 33/137 (24%), Positives = 65/137 (47%), Gaps = 20/137 (14%)

Query: 75  HSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H+M +A++ +    VQ     +  +   +DF    P + DE+ ++E+ +   I  +
Sbjct: 564 HSATHLMHKALREVLGAHVQQKGSLVDAEKTRFDFAHNAPMTDDEIRRVEQIVNNEILAN 623

Query: 134 SPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           +P + + + +++A +     LF  +K   +V +L+   ++E            LC G HV
Sbjct: 624 APGIVRVMPYDEAVKGGAMALF-GEKYGDEVRVLDLGFSRE------------LCGGTHV 670

Query: 189 RSTGQVKKFFKLMKVAG 205
             TG +  FFK++   G
Sbjct: 671 HRTGDI-GFFKIVVEGG 686


>gi|301165787|emb|CBW25359.1| alanyl-tRNA synthetase [Bacteriovorax marinus SJ]
          Length = 878

 Score = 38.1 bits (87), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 70/162 (43%), Gaps = 24/162 (14%)

Query: 39  VAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP 98
           VA  I+G+V D S+      I++    + RS     HS  H++  A+  +  +  V  G 
Sbjct: 539 VANVISGEVKDGSE------IQLKVDSEVRSDIKRNHSATHLLHAALHKVVGKHAVQKGS 592

Query: 99  II-EDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFES 152
           ++  D   +DF  +   + +EL +IE    + I  +S      L ++ A E     LF  
Sbjct: 593 LVRSDRLRFDFQNQSAVTKEELDKIEALTNQWIMENSGSETDLLDYDAAIEKGAIALFGE 652

Query: 153 KKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQV 194
           K ++ KV +   I   EN          +LC G HV  TG +
Sbjct: 653 KYDS-KVRV---ISFGENSV--------ELCGGTHVSRTGDI 682


>gi|172060378|ref|YP_001808030.1| alanyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
 gi|205829999|sp|B1YNJ6|SYA_BURA4 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|171992895|gb|ACB63814.1| alanyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
          Length = 874

 Score = 38.1 bits (87), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 32/137 (23%), Positives = 66/137 (48%), Gaps = 20/137 (14%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H+M +A++ +        G +++ +   +DF    P + DE+ ++E+ +   I  +
Sbjct: 564 HSATHLMHKALREVLGAHVQQKGSLVDAEKTRFDFAHNAPMTDDEIRRVEQIVNNEILAN 623

Query: 134 SPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           +P + + + +++A +     LF  +K   +V +L+   ++E            LC G HV
Sbjct: 624 APGIVRVMPYDEAVKGGAMALF-GEKYGDEVRVLDLGFSRE------------LCGGTHV 670

Query: 189 RSTGQVKKFFKLMKVAG 205
             TG +  FFK++   G
Sbjct: 671 HRTGDI-GFFKIVVEGG 686


>gi|257460412|ref|ZP_05625513.1| alanyl-tRNA synthetase [Campylobacter gracilis RM3268]
 gi|257441743|gb|EEV16885.1| alanyl-tRNA synthetase [Campylobacter gracilis RM3268]
          Length = 847

 Score = 38.1 bits (87), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 35/164 (21%), Positives = 65/164 (39%), Gaps = 36/164 (21%)

Query: 50  LSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDF 108
           L+  ++ G I  +   + R      HS  H++  A++++        G ++E D   +DF
Sbjct: 526 LNRNLKIGDIVGLKVSEEREQIARHHSATHLLHAALRAVLGAHIAQAGSLVEADRLRFDF 585

Query: 109 DKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK 168
              +  S +ELA+IE+ +   + +                       A K EI++   AK
Sbjct: 586 SHPKALSDEELAKIEEFVNNAVCKGC---------------------AAKTEIMDIDDAK 624

Query: 169 ENVTLYRQGEWF--------------DLCRGPHVRSTGQVKKFF 198
            +  +   GE +              +LC G HVR+  ++  FF
Sbjct: 625 NSGAIALFGEKYGSKVRVVSFGEISKELCGGIHVRNLSEIGSFF 668


>gi|311739550|ref|ZP_07713385.1| GTP diphosphokinase [Corynebacterium pseudogenitalium ATCC 33035]
 gi|311305366|gb|EFQ81434.1| GTP diphosphokinase [Corynebacterium pseudogenitalium ATCC 33035]
          Length = 762

 Score = 38.1 bits (87), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 1/61 (1%)

Query: 10  PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPEDPR 68
           P G + N P  +T  D A ++   +  + +   +NGK+  L   ++ G  +EI T +DP 
Sbjct: 424 PKGDVVNLPAGSTPVDFAYAVHTEVGHRCIGAKVNGKLVALESKLKSGDKVEIFTSKDPN 483

Query: 69  S 69
           +
Sbjct: 484 A 484


>gi|261405443|ref|YP_003241684.1| alanyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
 gi|261281906|gb|ACX63877.1| alanyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
          Length = 875

 Score = 38.1 bits (87), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 34/142 (23%), Positives = 66/142 (46%), Gaps = 15/142 (10%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKM 126
           R+  V  H+  H++ +A++ +  E     G ++E     +DF      + +ELA IE+++
Sbjct: 556 RNDIVKNHTATHLLHKALKEVLGEHVNQAGSLVEPQRLRFDFSHFGSITQEELADIERRV 615

Query: 127 QEIIARDSPFL--KQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLC 183
            E + +  P +  ++ +   KA        E Y           + V + + G++  +LC
Sbjct: 616 NEQVWKSVPVVIERKAIDEAKAMGAMALFGEKY----------GDIVRVVQVGDYSIELC 665

Query: 184 RGPHVRSTGQVKKFFKLMKVAG 205
            G HV +T Q+   FKL+  +G
Sbjct: 666 GGCHVDNTSQI-GIFKLLGESG 686


>gi|255325089|ref|ZP_05366195.1| GTP pyrophosphokinase [Corynebacterium tuberculostearicum SK141]
 gi|255297654|gb|EET76965.1| GTP pyrophosphokinase [Corynebacterium tuberculostearicum SK141]
          Length = 762

 Score = 38.1 bits (87), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 1/61 (1%)

Query: 10  PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPEDPR 68
           P G + N P  +T  D A ++   +  + +   +NGK+  L   ++ G  +EI T +DP 
Sbjct: 424 PKGDVVNLPAGSTPVDFAYAVHTEVGHRCIGAKVNGKLVALESKLKSGDKVEIFTSKDPN 483

Query: 69  S 69
           +
Sbjct: 484 A 484


>gi|240047430|ref|YP_002960818.1| alanyl-tRNA synthetase [Mycoplasma conjunctivae HRC/581]
 gi|239985002|emb|CAT04995.1| Alanyl-tRNA synthetase [Mycoplasma conjunctivae]
          Length = 884

 Score = 38.1 bits (87), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 70/146 (47%), Gaps = 17/146 (11%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWP-EVQVAIGPIIEDGFYYDFDKEQPFSSD 117
           +++I  E  R      HS  H++ +A++  +  +++       E+   +DF   +  + +
Sbjct: 545 VKLIVDEANRRNLERNHSATHLLFKALREQFGLQIKQLGSDNNENRLTFDFPVSKKPTDE 604

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKE-----NVT 172
           ELA++E  +   I   +P  ++YL+         + KEA K+  + ++   E     NV 
Sbjct: 605 ELAKVESLVNFYIQSSTP--RKYLN--------TTIKEAEKLNAIMTLEEAEYMDPKNVR 654

Query: 173 L-YRQGEWFDLCRGPHVRSTGQVKKF 197
           L + QG   DLC G H+ +T  ++KF
Sbjct: 655 LVHFQGITTDLCGGTHIANTSLIQKF 680


>gi|32562922|dbj|BAC79235.1| guanosine-3', 5'-pyrophosphohydrolase [Shewanella violacea]
          Length = 673

 Score = 38.1 bits (87), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 1/68 (1%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIE 60
           P +I +  P+G I   PV AT  D A  +   +    V   +N +   LS P+  G +IE
Sbjct: 359 PEEIYVFTPEGRILELPVGATPVDFAYEVHTDVGTTCVGARVNRQAYPLSQPLISGQTIE 418

Query: 61  IITPEDPR 68
           IIT +  R
Sbjct: 419 IITAKGAR 426


>gi|84489844|ref|YP_448076.1| glycyl-tRNA synthetase [Methanosphaera stadtmanae DSM 3091]
 gi|84373163|gb|ABC57433.1| GlyS [Methanosphaera stadtmanae DSM 3091]
          Length = 580

 Score = 38.1 bits (87), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 3/86 (3%)

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRE-LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
           +T  ++P    G    F    + Y++ LP  + + G  YRNE S    G++R+R FTQ +
Sbjct: 154 QTGFMRPETAQGIFIAFKRISRFYKDKLPFGIVQLGKSYRNELS-PRQGVIRLREFTQAE 212

Query: 391 AHVFCTKEQMFNECLK-IHNLIISIY 415
           A +F       ++  K I N ++ +Y
Sbjct: 213 AEIFVDPSDKTHKNYKNIENHVLHLY 238


>gi|332877644|ref|ZP_08445387.1| putative GTP diphosphokinase [Capnocytophaga sp. oral taxon 329
           str. F0087]
 gi|332684393|gb|EGJ57247.1| putative GTP diphosphokinase [Capnocytophaga sp. oral taxon 329
           str. F0087]
          Length = 733

 Score = 38.1 bits (87), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 1/60 (1%)

Query: 10  PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPR 68
           P+G IK+ P  AT  D A SI   +  K     +N K+  L+  ++ G ++EIIT E+ +
Sbjct: 411 PNGEIKSLPKGATPIDFAFSIHTGVGLKTRGAKVNNKLVPLNQVLKSGDTVEIITAENAK 470


>gi|154496367|ref|ZP_02035063.1| hypothetical protein BACCAP_00655 [Bacteroides capillosus ATCC
           29799]
 gi|150274450|gb|EDN01527.1| hypothetical protein BACCAP_00655 [Bacteroides capillosus ATCC
           29799]
          Length = 741

 Score = 38.1 bits (87), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 1/55 (1%)

Query: 10  PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI-EIIT 63
           P G + N P  AT  D A SI  ++  K     +NG++     P++ G I E+IT
Sbjct: 396 PRGDVINLPAGATPIDFAYSIHSAVGNKMTGAKVNGRMVPFDTPLKNGDIVEVIT 450


>gi|298384931|ref|ZP_06994490.1| alanine--tRNA ligase [Bacteroides sp. 1_1_14]
 gi|298262075|gb|EFI04940.1| alanine--tRNA ligase [Bacteroides sp. 1_1_14]
          Length = 872

 Score = 38.1 bits (87), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 33/132 (25%), Positives = 58/132 (43%), Gaps = 12/132 (9%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEK 124
           D R+     HS  H++  A++ +  +     G ++  D   +DF   Q  + +E+ Q+E 
Sbjct: 554 DKRAACAANHSATHLLDSALREVLGKHIEQKGSLVTPDSLRFDFSHFQKVTDEEIRQVEH 613

Query: 125 KMQEIIARDSPFLKQY--LSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
            +   I  + P LK+Y  +  E+A+EL        K          E V + + G   + 
Sbjct: 614 LVNAKIRANIP-LKEYRNIPIEEAKELGAIALFGEKY--------GERVRVIQFGSSIEF 664

Query: 183 CRGPHVRSTGQV 194
           C G HV +TG +
Sbjct: 665 CGGIHVAATGNI 676


>gi|238027796|ref|YP_002912027.1| alanyl-tRNA synthetase [Burkholderia glumae BGR1]
 gi|237876990|gb|ACR29323.1| Alanyl-tRNA synthetase [Burkholderia glumae BGR1]
          Length = 874

 Score = 38.1 bits (87), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 33/137 (24%), Positives = 66/137 (48%), Gaps = 20/137 (14%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H+M +A++ +        G +++ +   +DF    P S +E+ ++E  +   I  +
Sbjct: 564 HSATHLMHKALREVLGGHVQQKGSLVDAEKTRFDFAHNAPLSDEEIRRVEAIVNAEILAN 623

Query: 134 SPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           +P + + +S+++A +     LF  +K   +V +L+   ++E            LC G HV
Sbjct: 624 APGIIRNMSYDEAVKGGAMALF-GEKYGDEVRVLDLGFSRE------------LCGGTHV 670

Query: 189 RSTGQVKKFFKLMKVAG 205
             TG +  FFK++   G
Sbjct: 671 SRTGDI-GFFKIVAEGG 686


>gi|116331894|ref|YP_801612.1| alanine--tRNA ligase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|122280371|sp|Q04QG6|SYA_LEPBJ RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|116125583|gb|ABJ76854.1| Alanine--tRNA ligase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 940

 Score = 38.1 bits (87), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 29/128 (22%), Positives = 60/128 (46%), Gaps = 14/128 (10%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY-YDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++  A++++  +  +  G ++   +  +DF      +S E+ +IE  + E I ++
Sbjct: 581 HSGTHLLNGALRNLLGDHVLQKGSVVSPEYLRFDFSHPSALTSKEIRKIESWVNESIRKN 640

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAK--ENVTLYRQGEW-FDLCRGPHVRS 190
            P + + L  E A+          K+  + +   K  + V + + G+   + C G HV  
Sbjct: 641 YPVVTKELPIEDAK----------KIGAVATFGEKYGDRVRVVQMGDASVEFCGGTHVSH 690

Query: 191 TGQVKKFF 198
           TG++  FF
Sbjct: 691 TGEIGYFF 698


>gi|325188965|emb|CCA23493.1| prolyltRNA synthetase putative [Albugo laibachii Nc14]
          Length = 620

 Score = 38.1 bits (87), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 38/157 (24%), Positives = 67/157 (42%), Gaps = 20/157 (12%)

Query: 287 IKDDYEEIN-----TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           I  + E+IN      P ++   LW+ S  W S  + +F  +   +  + L     +PM  
Sbjct: 72  IDTEMEKINGNKCDLPAIVSSDLWKLSDRWRSRTSELFTFRDRRNNEQILAPTHEEPMTA 131

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
                V  H   ++  L  RL + G  YR+E      GL+R R F   D + F T    +
Sbjct: 132 ----LVAQHHNSTHESL--RLYQIGKKYRDEVRPRF-GLLRAREFIMKDMYSFDTN---Y 181

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD 438
           +  +  ++ +I  YK     +I+ ++   P  +V +D
Sbjct: 182 SNAVTTYDAVIGSYK-----RILQQILRLPVVQVQAD 213


>gi|289208781|ref|YP_003460847.1| alanyl-tRNA synthetase [Thioalkalivibrio sp. K90mix]
 gi|288944412|gb|ADC72111.1| alanyl-tRNA synthetase [Thioalkalivibrio sp. K90mix]
          Length = 869

 Score = 38.1 bits (87), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 70/152 (46%), Gaps = 17/152 (11%)

Query: 54  VREGSIEI-----ITPEDPRSLAVIRH-SCAHIMAEAVQS-IWPEVQVAIGPIIEDGFYY 106
           VR G++E+        E PR   + RH S  H++ +A++  +   VQ     +  D   +
Sbjct: 531 VRAGTLEVGQTLQAAVEGPRRENIRRHHSATHLLHKALRDQLGDHVQQKGSLVDPDRLRF 590

Query: 107 DFDKEQPFSSDELAQIEKKMQ-EIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESI 165
           DF   +P + ++L  IE ++  EI+A ++       +  +  ++ ES  E+  V +    
Sbjct: 591 DFTHMEPLTDEQLRAIEAQVNAEILANEA-------TDTRVMDI-ESAMESGAVALFGE- 641

Query: 166 PAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
              + V + + G   +LC G HV  TG +  F
Sbjct: 642 KYGDQVRVLKIGTSVELCGGTHVDRTGDIGLF 673


>gi|150006475|ref|YP_001301219.1| alanyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482]
 gi|294775423|ref|ZP_06740938.1| threonyl and Alanyl tRNA synthetase second additional domain
           protein [Bacteroides vulgatus PC510]
 gi|149934899|gb|ABR41597.1| alanyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482]
 gi|294450743|gb|EFG19228.1| threonyl and Alanyl tRNA synthetase second additional domain
           protein [Bacteroides vulgatus PC510]
          Length = 152

 Score = 38.1 bits (87), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 27/124 (21%), Positives = 58/124 (46%), Gaps = 9/124 (7%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDS 134
           H+  H++   + +++   +     I       DF  +      ++ +IE  + E++ R+ 
Sbjct: 18  HTTEHVINRTMVNLFGCGRAISAHIERKKSKLDFALQTCPEEADIIRIENTVNEVLRRNL 77

Query: 135 PFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD-LCRGPHVRSTGQ 193
           P   +++S E+A   F+ K+   K        A E V + + G++ + LC G HV++T +
Sbjct: 78  PVTMEFISQEEAIGRFDMKRLPEK--------ASETVRIVKVGDYDECLCIGQHVKNTSE 129

Query: 194 VKKF 197
           +  F
Sbjct: 130 IGTF 133


>gi|115351339|ref|YP_773178.1| alanyl-tRNA synthetase [Burkholderia ambifaria AMMD]
 gi|122323447|sp|Q0BG79|SYA_BURCM RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|115281327|gb|ABI86844.1| alanyl-tRNA synthetase [Burkholderia ambifaria AMMD]
          Length = 874

 Score = 38.1 bits (87), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 33/137 (24%), Positives = 65/137 (47%), Gaps = 20/137 (14%)

Query: 75  HSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H+M +A++ +    VQ     +  +   +DF    P + DE+ ++E+ +   I  +
Sbjct: 564 HSATHLMHKALREVLGAHVQQKGSLVDAEKTRFDFAHNAPMTDDEIRRVEQIVNNEILAN 623

Query: 134 SPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           +P + + + +++A +     LF  +K   +V +L+   ++E            LC G HV
Sbjct: 624 APGIVRVMPYDEAVKGGAMALF-GEKYGDEVRVLDLGFSRE------------LCGGTHV 670

Query: 189 RSTGQVKKFFKLMKVAG 205
             TG +  FFK++   G
Sbjct: 671 HRTGDI-GFFKIVVEGG 686


>gi|282896478|ref|ZP_06304498.1| Alanyl-tRNA synthetase, class IIc [Raphidiopsis brookii D9]
 gi|281198584|gb|EFA73465.1| Alanyl-tRNA synthetase, class IIc [Raphidiopsis brookii D9]
          Length = 878

 Score = 38.1 bits (87), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 36/143 (25%), Positives = 62/143 (43%), Gaps = 17/143 (11%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKM 126
           R  A   H+  H++  A++ I  E     G ++  D   +DF+  +  + DE+ Q+E  +
Sbjct: 557 RRRAQANHTATHLLQAALKKIVDEGISQAGSLVSFDRLRFDFNCSRSLTEDEVQQVEDLV 616

Query: 127 QEIIARDSPFLKQYLS--HEKARELFESKKEAY--KVEILESIPAKENVTLYRQGEWFDL 182
              I++  P   + L     KAR       E Y   V +++  P          G   +L
Sbjct: 617 NAWISQAHPAQVEILPLPEAKARGAVAMFGEKYGDHVRVID-FP----------GVSMEL 665

Query: 183 CRGPHVRSTGQVKKFFKLMKVAG 205
           C G HV +TG++   FK++   G
Sbjct: 666 CGGTHVNNTGEI-GVFKIISQVG 687


>gi|225376526|ref|ZP_03753747.1| hypothetical protein ROSEINA2194_02168 [Roseburia inulinivorans DSM
           16841]
 gi|225211625|gb|EEG93979.1| hypothetical protein ROSEINA2194_02168 [Roseburia inulinivorans DSM
           16841]
          Length = 768

 Score = 38.1 bits (87), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 2/68 (2%)

Query: 3   SDIKLTF-PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IE 60
           SD    F P G +KN P  +T  D A SI  ++  K +   +NGK+  +   ++ G  IE
Sbjct: 423 SDTVFCFTPTGDVKNLPNGSTPIDFAYSIHSAVGNKMIGAKVNGKLVPIDYVIQNGDRIE 482

Query: 61  IITPEDPR 68
           ++T ++ +
Sbjct: 483 VLTSQNSK 490


>gi|213405351|ref|XP_002173447.1| prolyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
 gi|212001494|gb|EEB07154.1| prolyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
          Length = 418

 Score = 38.1 bits (87), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 47/98 (47%), Gaps = 11/98 (11%)

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           +WQQS  W+   + M  ++      +  R + L P +      +  +   S ++LP+ + 
Sbjct: 84  VWQQSKRWEKMGSEMLHIR-----DRAQRDYCLCPTHEEEMTRMVANVFHSSKQLPISVY 138

Query: 364 EFGSVYRNE--PSGSLHGLMRVRGFTQDDAHVF-CTKE 398
           + GS YR+E  P G   GL+R + F   D + +  TKE
Sbjct: 139 QIGSKYRDEARPRG---GLLRAKEFLMMDLYTYDATKE 173


>gi|119946985|ref|YP_944665.1| alanyl-tRNA synthetase [Psychromonas ingrahamii 37]
 gi|205830184|sp|A1T001|SYA_PSYIN RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|119865589|gb|ABM05066.1| alanyl-tRNA synthetase [Psychromonas ingrahamii 37]
          Length = 867

 Score = 38.1 bits (87), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 37/166 (22%), Positives = 68/166 (40%), Gaps = 32/166 (19%)

Query: 40  AVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPI 99
           +V +N KV    D  R  SI             + HS  H++  A++    E     G +
Sbjct: 532 SVKVNDKVHAEVDTARRQSI------------ALHHSATHLLHAALRKTLGEHVTQKGSL 579

Query: 100 IE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESK 153
           ++ D   +DF   +  S+D L+++   + E I  +   + + +  E+A+      LF  K
Sbjct: 580 VDADKLRFDFSHFEALSADSLSEVTFLVNEAIRNNYEVVTKLMDIEEAKSSNAMALFGEK 639

Query: 154 KEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKFF 198
            +             E V + + G++  +LC G H + TG +  F 
Sbjct: 640 YD-------------EMVRVVQMGDFSTELCGGTHAKRTGDLGLFL 672


>gi|157829157|ref|YP_001495399.1| alanyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila Smith']
 gi|165933886|ref|YP_001650675.1| alanyl-tRNA synthetase [Rickettsia rickettsii str. Iowa]
 gi|205830193|sp|B0BVK9|SYA_RICRO RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|205830194|sp|A8GU16|SYA_RICRS RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|157801638|gb|ABV76891.1| alanyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila Smith']
 gi|165908973|gb|ABY73269.1| alanyl-tRNA synthetase [Rickettsia rickettsii str. Iowa]
          Length = 877

 Score = 38.1 bits (87), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 57/129 (44%), Gaps = 14/129 (10%)

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY-YDFDKEQPFSSDELAQIEKKMQEIIA 131
           I HS  HI+   +  +  +     G ++   +  +D    +  +++E+  IE K+ EII 
Sbjct: 565 IHHSATHILHAVLHEVLGKHVTQKGSLVAPTYLRFDISHSKAVTNEEITLIEDKVNEII- 623

Query: 132 RDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK--ENVTLYRQGEW-FDLCRGPHV 188
           RD+        HE    L  ++ +A K   +     K    V + + GE   +LC G HV
Sbjct: 624 RDN--------HEVTTTLMATE-DAIKQGAMALFGEKYDSEVRVVKMGETSLELCGGTHV 674

Query: 189 RSTGQVKKF 197
           R TG +  F
Sbjct: 675 RRTGDIGCF 683


>gi|327357537|gb|EGE86394.1| prolyl-tRNA synthetase [Ajellomyces dermatitidis ATCC 18188]
          Length = 601

 Score = 38.1 bits (87), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 7/93 (7%)

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           Q LW++SG     + +    K  D   K+ R F L P +     ++    + SYR+LP+R
Sbjct: 82  QALWEKSGR---LKKDSEFFKFQDR--KEAR-FLLAPTHEEEITSLVAGAVNSYRDLPLR 135

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           + +    YR+EP     GL+R R F   D + F
Sbjct: 136 VYQISRKYRDEPR-PRQGLLRGREFIMKDLYTF 167


>gi|254283834|ref|ZP_04958802.1| alanyl-tRNA synthetase [gamma proteobacterium NOR51-B]
 gi|219680037|gb|EED36386.1| alanyl-tRNA synthetase [gamma proteobacterium NOR51-B]
          Length = 865

 Score = 38.1 bits (87), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 32/128 (25%), Positives = 54/128 (42%), Gaps = 16/128 (12%)

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSDELAQIEKKMQEIIA 131
           + HS  H++  A++ +  E     G +++     +DF  E+P S  EL+ I   + E I 
Sbjct: 550 LNHSATHLLHAALRQVLGEHVTQKGSLVDSQRLRFDFSNEKPVSKTELSTISDIVNEQIR 609

Query: 132 RDSPFLKQYLS-----HEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGP 186
            ++P   + +S        A  LF  +K    V +L         T+       +LC G 
Sbjct: 610 GNTPVTTENMSMDAAMDAGAMALF-GEKYGDSVRVL---------TMGNDRFSVELCGGT 659

Query: 187 HVRSTGQV 194
           HV  TG +
Sbjct: 660 HVERTGDI 667


>gi|212213188|ref|YP_002304124.1| GTP pyrophosphokinase [Coxiella burnetii CbuG_Q212]
 gi|212011598|gb|ACJ18979.1| GTP pyrophosphokinase [Coxiella burnetii CbuG_Q212]
          Length = 707

 Score = 38.1 bits (87), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 1/68 (1%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIE 60
           P ++ +  P G I   P  AT  D A ++   +    VAV I+  +  LS P+  G ++E
Sbjct: 385 PDEVYVFTPRGEIMELPAGATAIDFAYAVHTDVGNNCVAVKIDRHLAPLSTPLVNGQTVE 444

Query: 61  IITPEDPR 68
           +IT    R
Sbjct: 445 VITSSSGR 452


>gi|161831397|ref|YP_001596252.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase [Coxiella
           burnetii RSA 331]
 gi|161763264|gb|ABX78906.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase [Coxiella
           burnetii RSA 331]
          Length = 707

 Score = 38.1 bits (87), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 1/68 (1%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIE 60
           P ++ +  P G I   P  AT  D A ++   +    VAV I+  +  LS P+  G ++E
Sbjct: 385 PDEVYVFTPRGEIMELPAGATAIDFAYAVHTDVGNNCVAVKIDRHLAPLSTPLVNGQTVE 444

Query: 61  IITPEDPR 68
           +IT    R
Sbjct: 445 VITSSSGR 452


>gi|15893250|ref|NP_360964.1| alanyl-tRNA synthetase [Rickettsia conorii str. Malish 7]
 gi|20532256|sp|Q92G00|SYA_RICCN RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|15620469|gb|AAL03865.1| alanyl-tRNA synthetase [Rickettsia conorii str. Malish 7]
          Length = 878

 Score = 38.1 bits (87), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 57/129 (44%), Gaps = 14/129 (10%)

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY-YDFDKEQPFSSDELAQIEKKMQEIIA 131
           I HS  HI+   +  +  +     G ++   +  +D    +  +++E+  IE K+ EII 
Sbjct: 565 IHHSATHILHAVLHEVLGKHVTQKGSLVAPTYLRFDISHSKAVTNEEITLIEDKVNEII- 623

Query: 132 RDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK--ENVTLYRQGEW-FDLCRGPHV 188
           RD+        HE    L  ++ +A K   +     K    V + + GE   +LC G HV
Sbjct: 624 RDN--------HEVTTTLMATE-DAIKQGAMALFGEKYDSEVRVVKMGETSLELCGGTHV 674

Query: 189 RSTGQVKKF 197
           R TG +  F
Sbjct: 675 RRTGDIGCF 683


>gi|261210116|ref|ZP_05924414.1| alanyl-tRNA synthetase [Vibrio sp. RC341]
 gi|260840881|gb|EEX67423.1| alanyl-tRNA synthetase [Vibrio sp. RC341]
          Length = 860

 Score = 38.1 bits (87), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 30/149 (20%), Positives = 66/149 (44%), Gaps = 11/149 (7%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSD 117
           +E I  E  R+   + HS  H++  A++ +  E     G ++  +   +DF   +  ++ 
Sbjct: 547 VEAIVDEQRRAAISLNHSATHLLHAALRKVLGEHVAQKGSLVRAETLRFDFSHLEAMTAA 606

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           E+ ++E+ + + I R+       ++ ++A+        A     L      + V +   G
Sbjct: 607 EIKEVERLVNQEIRRNHHIETHIMNIDEAK--------AKGAMALFGEKYDDQVRVLSMG 658

Query: 178 EW-FDLCRGPHVRSTGQVKKFFKLMKVAG 205
           ++  +LC G H  +TG +   FK++   G
Sbjct: 659 DFSTELCGGIHASNTGDI-GLFKIISEGG 686


>gi|229587224|ref|YP_002845725.1| alanyl-tRNA synthetase [Rickettsia africae ESF-5]
 gi|228022274|gb|ACP53982.1| Alanyl-tRNA synthetase [Rickettsia africae ESF-5]
          Length = 878

 Score = 38.1 bits (87), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 57/129 (44%), Gaps = 14/129 (10%)

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY-YDFDKEQPFSSDELAQIEKKMQEIIA 131
           I HS  HI+   +  +  +     G ++   +  +D    +  +++E+  IE K+ EII 
Sbjct: 565 IHHSATHILHAVLHEVLGKHVTQKGSLVAPTYLRFDISHSKAVTNEEITLIEDKVNEII- 623

Query: 132 RDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK--ENVTLYRQGEW-FDLCRGPHV 188
           RD+        HE    L  ++ +A K   +     K    V + + GE   +LC G HV
Sbjct: 624 RDN--------HEVTTTLMATE-DAIKQGAMALFGEKYDSEVRVVKMGETSLELCGGTHV 674

Query: 189 RSTGQVKKF 197
           R TG +  F
Sbjct: 675 RRTGDIGCF 683


>gi|301064997|ref|ZP_07205342.1| GTP diphosphokinase [delta proteobacterium NaphS2]
 gi|300440846|gb|EFK05266.1| GTP diphosphokinase [delta proteobacterium NaphS2]
          Length = 716

 Score = 38.1 bits (87), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 1/63 (1%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI-E 60
           P ++ +  P G +K+FP  AT  D A SI   + +K     ++G++  L   ++ G+I E
Sbjct: 384 PDEVYVFTPTGEVKSFPKGATMIDFAYSIHSEVGEKCSGAKVDGRMVPLRAELKNGNIVE 443

Query: 61  IIT 63
           +IT
Sbjct: 444 VIT 446


>gi|165919780|ref|ZP_02219523.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase [Coxiella
           burnetii RSA 334]
 gi|165916863|gb|EDR35467.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase [Coxiella
           burnetii RSA 334]
          Length = 707

 Score = 38.1 bits (87), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 1/68 (1%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIE 60
           P ++ +  P G I   P  AT  D A ++   +    VAV I+  +  LS P+  G ++E
Sbjct: 385 PDEVYVFTPRGEIMELPAGATAIDFAYAVHTDVGNNCVAVKIDRHLAPLSTPLVNGQTVE 444

Query: 61  IITPEDPR 68
           +IT    R
Sbjct: 445 VITSSSGR 452


>gi|153208662|ref|ZP_01946914.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase [Coxiella
           burnetii 'MSU Goat Q177']
 gi|212218138|ref|YP_002304925.1| GTP pyrophosphokinase [Coxiella burnetii CbuK_Q154]
 gi|120575848|gb|EAX32472.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase [Coxiella
           burnetii 'MSU Goat Q177']
 gi|212012400|gb|ACJ19780.1| GTP pyrophosphokinase [Coxiella burnetii CbuK_Q154]
          Length = 707

 Score = 38.1 bits (87), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 1/68 (1%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIE 60
           P ++ +  P G I   P  AT  D A ++   +    VAV I+  +  LS P+  G ++E
Sbjct: 385 PDEVYVFTPRGEIMELPAGATAIDFAYAVHTDVGNNCVAVKIDRHLAPLSTPLVNGQTVE 444

Query: 61  IITPEDPR 68
           +IT    R
Sbjct: 445 VITSSSGR 452


>gi|154705731|ref|YP_001425110.1| GTP pyrophosphokinase [Coxiella burnetii Dugway 5J108-111]
 gi|154355017|gb|ABS76479.1| GTP pyrophosphokinase [Coxiella burnetii Dugway 5J108-111]
          Length = 707

 Score = 38.1 bits (87), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 1/68 (1%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIE 60
           P ++ +  P G I   P  AT  D A ++   +    VAV I+  +  LS P+  G ++E
Sbjct: 385 PDEVYVFTPRGEIMELPAGATAIDFAYAVHTDVGNNCVAVKIDRHLAPLSTPLVNGQTVE 444

Query: 61  IITPEDPR 68
           +IT    R
Sbjct: 445 VITSSSGR 452


>gi|29653654|ref|NP_819346.1| GTP pyrophosphokinase [Coxiella burnetii RSA 493]
 gi|29540916|gb|AAO89860.1| GTP pyrophosphokinase [Coxiella burnetii RSA 493]
          Length = 707

 Score = 38.1 bits (87), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 1/68 (1%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIE 60
           P ++ +  P G I   P  AT  D A ++   +    VAV I+  +  LS P+  G ++E
Sbjct: 385 PDEVYVFTPRGEIMELPAGATAIDFAYAVHTDVGNNCVAVKIDRHLAPLSTPLVNGQTVE 444

Query: 61  IITPEDPR 68
           +IT    R
Sbjct: 445 VITSSSGR 452


>gi|314933784|ref|ZP_07841149.1| alanine--tRNA ligase [Staphylococcus caprae C87]
 gi|313653934|gb|EFS17691.1| alanine--tRNA ligase [Staphylococcus caprae C87]
          Length = 876

 Score = 38.1 bits (87), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 34/150 (22%), Positives = 67/150 (44%), Gaps = 18/150 (12%)

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELA 120
           +  ED R++    HS  H++  A++ +        G ++E D   +DF    P + +EL 
Sbjct: 553 VNKEDRRAIQK-NHSATHLLHAALKEVLGYHVNQAGSLVEADRLRFDFSHFGPMTQEELD 611

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKAREL----FESKKEAYKVEILESIPAKENVTLYRQ 176
           Q+E+++ E I R      Q +  ++A+ +       +K +  V ++   P          
Sbjct: 612 QVERRVNEEIWRGIDVRIQEMGIDEAKSMGAMALFGEKYSDIVRVVNMAPFS-------- 663

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVAGA 206
               +LC G HV +T ++   FK++  +G 
Sbjct: 664 ---IELCGGIHVSNTAEI-GLFKIVSESGT 689


>gi|197294554|ref|YP_001799095.1| alanyl-tRNA synthetase [Candidatus Phytoplasma australiense]
 gi|171853881|emb|CAM11843.1| Alanyl-tRNA synthetase [Candidatus Phytoplasma australiense]
          Length = 863

 Score = 38.1 bits (87), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 30/129 (23%), Positives = 61/129 (47%), Gaps = 14/129 (10%)

Query: 75  HSCAHIMAEAVQS-IWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           H+  H++   +Q+ +   ++     +  +   YDF+  +  + ++L +IEK++  +I ++
Sbjct: 535 HTATHLLETVLQNELGSHLEKQGSSVGYNSLRYDFNHFEKLTPEKLIKIEKEINGLIKKN 594

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPA---KENVTLYRQGEWF--DLCRGPHV 188
                Q +  ++A+E +         +IL   P    K+ V + R G  F  DLC G H 
Sbjct: 595 LSVEIQKIPTQEAKENYS--------DILSKNPKAKYKDEVRIVRIGNDFSIDLCGGTHA 646

Query: 189 RSTGQVKKF 197
             T  ++KF
Sbjct: 647 SETKNLEKF 655


>gi|78186280|ref|YP_374323.1| metal dependent phosphohydrolase [Chlorobium luteolum DSM 273]
 gi|78166182|gb|ABB23280.1| metal dependent phosphohydrolase [Chlorobium luteolum DSM 273]
          Length = 733

 Score = 38.1 bits (87), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 3/69 (4%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEII 62
           +I +  P G +K  P  AT  D A SI   +    +   +NG++  L+  ++ G  +EII
Sbjct: 395 EIYVFTPKGDMKTMPAGATPIDFAYSIHTEIGNSCIGAKVNGRIVRLNAELKSGDRVEII 454

Query: 63  TPED--PRS 69
           T ++  PR+
Sbjct: 455 TSKNQQPRA 463


>gi|21674364|ref|NP_662429.1| GTP pyrophosphokinase [Chlorobium tepidum TLS]
 gi|21647542|gb|AAM72771.1| GTP pyrophosphokinase [Chlorobium tepidum TLS]
          Length = 731

 Score = 38.1 bits (87), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 1/63 (1%)

Query: 10  PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPEDPR 68
           P G +K  P  AT  D A +I   +    +   +NGK+  L+  +R G  +E+IT +  R
Sbjct: 401 PKGDMKVLPAGATPIDFAYAIHSEIGNGCIGAKVNGKIVRLNTELRSGDRVEVITSKSQR 460

Query: 69  SLA 71
             A
Sbjct: 461 PKA 463


>gi|116327492|ref|YP_797212.1| alanine--tRNA ligase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|122284708|sp|Q054G6|SYA_LEPBL RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|116120236|gb|ABJ78279.1| Alanine--tRNA ligase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
          Length = 940

 Score = 38.1 bits (87), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 29/128 (22%), Positives = 60/128 (46%), Gaps = 14/128 (10%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY-YDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++  A++++  +  +  G ++   +  +DF      +S E+ +IE  + E I ++
Sbjct: 581 HSGTHLLNGALRNLLGDHVLQKGSVVSPEYLRFDFSHPSALTSKEIRKIESWVNESIRKN 640

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAK--ENVTLYRQGEW-FDLCRGPHVRS 190
            P + + L  E A+          K+  + +   K  + V + + G+   + C G HV  
Sbjct: 641 YPVVTKELPIEDAK----------KIGAVATFGEKYGDRVRVVQMGDASVEFCGGTHVSH 690

Query: 191 TGQVKKFF 198
           TG++  FF
Sbjct: 691 TGEIGYFF 698


>gi|222055238|ref|YP_002537600.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacter sp. FRC-32]
 gi|221564527|gb|ACM20499.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacter sp. FRC-32]
          Length = 716

 Score = 38.1 bits (87), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 1/63 (1%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI-E 60
           P ++ +  P G +K +P  +T  D A S+   +  + V   +NGK+  L   ++ G I E
Sbjct: 384 PEEVYVFTPKGDVKGYPKGSTPIDFAYSVHTDVGHRCVGAKVNGKLVPLKYELKNGDIVE 443

Query: 61  IIT 63
           +IT
Sbjct: 444 VIT 446


>gi|157963690|ref|YP_001503724.1| bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis
           pyrophosphate 3'-pyrophosphohydrolase [Shewanella
           pealeana ATCC 700345]
 gi|157848690|gb|ABV89189.1| (p)ppGpp synthetase I, SpoT/RelA [Shewanella pealeana ATCC 700345]
          Length = 701

 Score = 38.1 bits (87), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 1/68 (1%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIE 60
           P +I +  P+G I   PV AT  D A  +   +    V   +N +   LS P+  G ++E
Sbjct: 387 PEEIYVFTPEGRILELPVGATPVDFAYEVHTDVGNTCVGAKVNRQAYPLSQPLISGQTVE 446

Query: 61  IITPEDPR 68
           IIT    R
Sbjct: 447 IITANGAR 454


>gi|161830958|ref|YP_001596677.1| alanyl-tRNA synthetase [Coxiella burnetii RSA 331]
 gi|205830041|sp|A9NCN7|SYA_COXBR RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|161762825|gb|ABX78467.1| alanyl-tRNA synthetase [Coxiella burnetii RSA 331]
          Length = 865

 Score = 38.1 bits (87), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 32/133 (24%), Positives = 66/133 (49%), Gaps = 11/133 (8%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++ EA++ +  E  +  G ++E     +DF   +P + +EL  +E+ + + I  +
Sbjct: 552 HSATHLLHEALRRVLGERVMQKGSLVEAKRLRFDFSHAKPLTPEELQAVERLVNQQIQAN 611

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTG 192
                + ++ E+A+     KK A  + +      KE V +   G++  ++C G H   TG
Sbjct: 612 LLSTIEVMTPEEAK-----KKGA--LALFGERYGKE-VRVLEMGDFSTEICGGTHTERTG 663

Query: 193 QVKKFFKLMKVAG 205
           ++   FK++  +G
Sbjct: 664 EI-GLFKIVSESG 675


>gi|307298258|ref|ZP_07578062.1| alanyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306916344|gb|EFN46727.1| alanyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 869

 Score = 38.1 bits (87), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 37/151 (24%), Positives = 73/151 (48%), Gaps = 14/151 (9%)

Query: 54  VREGSIEI-----ITPEDPRSLAVIR-HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYY 106
           V EG++ +     ++ ++ R  A+ R H+  H++  A++ +  E     G +++ D   +
Sbjct: 536 VEEGALHVGDKAWLSVDEDRRKAITRNHTATHLLHAALRKVLGEHVHQSGSLVQPDRLRF 595

Query: 107 DFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIP 166
           DF   QP S+DEL ++E+ + E I +           +KA + F+  K    + + E   
Sbjct: 596 DFSHFQPLSTDELNEVEEIVNEEILKAKVV-------DKAEKSFDEIKGQDVMALFEEKY 648

Query: 167 AKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
             +   +  +G   +LC G HV +TG++  F
Sbjct: 649 GDKVRVISVEGFSRELCGGTHVDNTGEIGLF 679


>gi|148553432|ref|YP_001261014.1| alanyl-tRNA synthetase [Sphingomonas wittichii RW1]
 gi|205830213|sp|A5V3L0|SYA_SPHWW RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|148498622|gb|ABQ66876.1| alanyl-tRNA synthetase [Sphingomonas wittichii RW1]
          Length = 887

 Score = 38.1 bits (87), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 40/180 (22%), Positives = 73/180 (40%), Gaps = 19/180 (10%)

Query: 25  DVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIRHSCAHIMAE 83
           D A+ + R  A +   V         S  VR G ++ ++   D R+     HS  H++  
Sbjct: 522 DTAKPLGRVHAHRGTVV---------SGSVRTGDALHLVVDGDRRTRIRANHSATHLLHA 572

Query: 84  AVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLS 142
           A+++         G ++  D F +DF   +  + +++A IE ++   I  +     + ++
Sbjct: 573 ALRNRLGSHVTQKGSLVAADRFRFDFSHPKALTPEDIAAIEAEVNRHIRENDEVTTRLMT 632

Query: 143 HEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
            + A E     LF    E Y  E+      K    L  +    +LC G HV + G +  F
Sbjct: 633 PDAAIEAGAMALF---GEKYGDEVRVLSMGKAGRDLGAKSYSVELCGGTHVSALGDIALF 689


>gi|326794049|ref|YP_004311869.1| alanyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
 gi|326544813|gb|ADZ90033.1| alanyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
          Length = 871

 Score = 38.1 bits (87), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 38/162 (23%), Positives = 74/162 (45%), Gaps = 20/162 (12%)

Query: 54  VREGSIEI---ITPEDPRSL---AVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYY 106
           ++EG+I++   +  +  RS+     + HS  H++ EA++ I  +     G ++  +   +
Sbjct: 533 LKEGAIKVGDTVAAQVDRSMRNATALNHSATHLVHEALRRIVGDHVNQKGSLVNAERLRF 592

Query: 107 DFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFE--SKKEAYKVEILES 164
           DF   +  ++ E+ Q+E  + E I          L+HE   E+ +  S KE   + +   
Sbjct: 593 DFSHFEGLTNAEIEQVEDMVNEQI---------RLNHEVITEIMDVDSAKEKGAMALFGE 643

Query: 165 IPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKFFKLMKVAG 205
               E   L    ++  +LC G HV+ TG +   FK++   G
Sbjct: 644 KYDSEVRVLTMGADYSIELCGGTHVKRTGDI-GLFKIVTEGG 684


>gi|256810754|ref|YP_003128123.1| alanyl-tRNA synthetase [Methanocaldococcus fervens AG86]
 gi|256793954|gb|ACV24623.1| alanyl-tRNA synthetase [Methanocaldococcus fervens AG86]
          Length = 892

 Score = 38.1 bits (87), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 40/161 (24%), Positives = 74/161 (45%), Gaps = 7/161 (4%)

Query: 46  KVCDLSDPVREGSIEIITPEDPRSLAVIR-HSCAHIMAEAVQSIWPE-VQVAIGPIIEDG 103
           K+ +L D ++EG +     +  R L+++R H+  HI+  A Q +  + V  A   +  D 
Sbjct: 560 KIENLDDELKEGDVVRGVIDWDRRLSLMRNHTATHIINAAAQKVLGKHVWQAGSDVDVDK 619

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE 163
              D    +  S +EL +IE+   EII  +      ++   +A E F  +   Y+  ++ 
Sbjct: 620 ARLDITHYKRISREELKEIERIANEIILSNYNVKSVFMDRNEAEEKFGFR--IYQGGVVP 677

Query: 164 SIPAKENVTLYRQGEWFDL--CRGPHVRSTGQVKKFFKLMK 202
               +  +     G   D+  C G H ++TG+V  F K++K
Sbjct: 678 GNVLRIVIIEDEDGNIVDVEACGGTHCQNTGEV-GFIKIIK 717


>gi|51244680|ref|YP_064564.1| alanyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
 gi|59798523|sp|Q6AQ16|SYA_DESPS RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|50875717|emb|CAG35557.1| probable alanyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
          Length = 882

 Score = 38.1 bits (87), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 41/182 (22%), Positives = 78/182 (42%), Gaps = 25/182 (13%)

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIE 123
           ++ R      HS  H++  A+ S+  +     G ++  +   +DF      ++ E+AQ+E
Sbjct: 561 DEERKATASNHSATHLLQAALISVLGDHVKQSGSLVGPERLRFDFTNFSQLTAAEIAQVE 620

Query: 124 KKMQEIIARDSPFLKQYLSHEK-----ARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
             + E I  ++      LS ++     A  LF  K +             ++V +   G+
Sbjct: 621 TLVNEQIRNNAVIATDVLSKQEAIAGGATALFGEKYD-------------DDVRVVSMGD 667

Query: 179 WF-DLCRGPHVRSTGQVKKFFKLMK--VAGAYWRGD--SNRPMLSRIYGTAWNTQQELTQ 233
           +  +LC G HV +TG++  F  L +  +A    R +  + R  L+ + G   +T  EL  
Sbjct: 668 YSRELCGGTHVGATGEIGLFVILSESGIAAGVRRIEALTGRAALAYVQGR-LSTGNELAD 726

Query: 234 YL 235
            L
Sbjct: 727 LL 728


>gi|256822655|ref|YP_003146618.1| alanyl-tRNA synthetase [Kangiella koreensis DSM 16069]
 gi|256796194|gb|ACV26850.1| alanyl-tRNA synthetase [Kangiella koreensis DSM 16069]
          Length = 875

 Score = 38.1 bits (87), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 33/137 (24%), Positives = 61/137 (44%), Gaps = 19/137 (13%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++  A++ I        G ++  +   +DF   +P + ++L QIE  + + I  +
Sbjct: 563 HSATHLLHAALRDILGTHVTQKGSLVGPERLRFDFSNPEPVTQEQLRQIEALVNQKIYEN 622

Query: 134 SPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
                  +S ++A+E     LF  +K   +V +L   P              +LC G HV
Sbjct: 623 HAVEAATMSMDEAKEHGAMALF-GEKYGDEVRVLTMSPFS-----------VELCGGTHV 670

Query: 189 RSTGQVKKFFKLMKVAG 205
           + TG +   FK++  +G
Sbjct: 671 QRTGDIGA-FKILSESG 686


>gi|160885717|ref|ZP_02066720.1| hypothetical protein BACOVA_03721 [Bacteroides ovatus ATCC 8483]
 gi|156108530|gb|EDO10275.1| hypothetical protein BACOVA_03721 [Bacteroides ovatus ATCC 8483]
          Length = 158

 Score = 38.1 bits (87), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 22/86 (25%), Positives = 48/86 (55%), Gaps = 13/86 (15%)

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
           +++++  IE ++ E+I+++ P   ++++HE+A+++ +          L  +PA  + TL+
Sbjct: 59  TAEQIQSIEDRVNEVISQNLPVTVEFMTHEQAKDIVD----------LSKLPADASETLH 108

Query: 175 --RQGEWFDL-CRGPHVRSTGQVKKF 197
             R G++    C G HV  T +V  F
Sbjct: 109 IVRIGDYDACACIGLHVSHTSEVGTF 134


>gi|20090862|ref|NP_616937.1| alanyl-tRNA synthetase domain-containing protein [Methanosarcina
           acetivorans C2A]
 gi|74551374|sp|Q8TPA0|ALAXM_METAC RecName: Full=Alanyl-tRNA editing protein AlaX-M; Short=AlaX-M;
           AltName: Full=Alanyl-tRNA deacylase AlaX-M
 gi|19915934|gb|AAM05417.1| alanyl-tRNA synthetase domain protein [Methanosarcina acetivorans
           C2A]
          Length = 245

 Score = 38.1 bits (87), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 36/142 (25%), Positives = 61/142 (42%), Gaps = 9/142 (6%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDS 134
           H+  H++A  ++      Q+    +  D    DF  E  F  D+ A+ EK   ++I  + 
Sbjct: 107 HTATHVIANVIEK-EAGAQITGNQLGLDKSRVDFSLE-AFDRDKFAEYEKIANKVITENH 164

Query: 135 PFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQV 194
           P +  YL   K  E   S+         E I     V +  +G   + C G H+++TG++
Sbjct: 165 P-VNLYLVSRKEAEEKLSRLTTLAKGFSEEISEVRLVEI--EGITIEACGGTHLKNTGEI 221

Query: 195 KKFFKLMKVAGAYWRGDSNRPM 216
           K     +K+     +G SNR M
Sbjct: 222 KG----IKIEKLQNKGKSNRRM 239


>gi|316983845|gb|EFV62825.1| alanyl-tRNA synthetase [Neisseria meningitidis H44/76]
 gi|325199806|gb|ADY95261.1| alanyl-tRNA synthetase [Neisseria meningitidis H44/76]
          Length = 874

 Score = 38.1 bits (87), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 36/178 (20%), Positives = 76/178 (42%), Gaps = 18/178 (10%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSS 116
           S+     ++ R+  +  HS  H+M +A++ +    V+     +  +   +D    Q  ++
Sbjct: 545 SVTAKVDDEIRNANMRNHSATHLMHKALRDVLGRHVEQKGSLVTAESTRFDISHPQAVTA 604

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARE----LFESKKEAYKVEILESIPAKENVT 172
           +E+A++E+++ E I  +       +S E A++    +   +K   +V +L+         
Sbjct: 605 EEIAEVERRVNEAILANVAVNAAIMSMEDAQKTGAMMLFGEKYGEEVRVLQ--------- 655

Query: 173 LYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQE 230
               G   +LC G HV  TG +   FK++   G    G      ++ +    W  +QE
Sbjct: 656 --MGGFSTELCGGTHVSRTGDI-GLFKIIS-EGGIAAGVRRIEAITGLNALKWAQEQE 709


>gi|150020809|ref|YP_001306163.1| threonyl/alanyl tRNA synthetase, SAD [Thermosipho melanesiensis
           BI429]
 gi|149793330|gb|ABR30778.1| Threonyl/alanyl tRNA synthetase, SAD [Thermosipho melanesiensis
           BI429]
          Length = 363

 Score = 38.1 bits (87), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 40/170 (23%), Positives = 77/170 (45%), Gaps = 14/170 (8%)

Query: 44  NGKVC-DLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIED 102
           +GK+  ++   + EGS EI   E+ R+     H+  HI++ A+  I     V      E 
Sbjct: 51  DGKIYHEIDREIEEGSYEIEIDEEHRNFVKAHHTAQHILSAALHEIAEINTVGFRMGFE- 109

Query: 103 GFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL 162
             Y   D + PF +D + +  +++   + +    +++ L   +    F+ +K      + 
Sbjct: 110 --YTTVDLDVPFVNDMVLKEAEELSNDVVKRCINVEEVLVDREDVGRFKLRK-----PLS 162

Query: 163 ESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVK--KFFKLMKVAGAYWR 209
           E +  K  V + + GE+ +  C G HV++TG++   K  K  K+ G   R
Sbjct: 163 EKVEGK--VRIIKIGEFDYSPCGGFHVKNTGEIGVIKVLKQEKIKGNLTR 210


>gi|150025909|ref|YP_001296735.1| GTP diphosphokinase [Flavobacterium psychrophilum JIP02/86]
 gi|149772450|emb|CAL43932.1| GTP diphosphokinase [Flavobacterium psychrophilum JIP02/86]
          Length = 739

 Score = 38.1 bits (87), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 1/60 (1%)

Query: 10  PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPR 68
           P G IK+ P  AT  D A SI   +  +     +NGK+  L+  ++ G  IEIIT ++ +
Sbjct: 409 PKGEIKSLPKGATSLDFAFSIHSEIGIRTRGTRVNGKLVQLNHVLKSGDQIEIITSQNQK 468


>gi|170728902|ref|YP_001762928.1| bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis
           pyrophosphate 3'-pyrophosphohydrolase [Shewanella woodyi
           ATCC 51908]
 gi|169814249|gb|ACA88833.1| (p)ppGpp synthetase I, SpoT/RelA [Shewanella woodyi ATCC 51908]
          Length = 703

 Score = 38.1 bits (87), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 1/68 (1%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIE 60
           P +I +  P+G I   PV AT  D A  +   +    V   +N +   LS P+  G ++E
Sbjct: 387 PEEIYVFTPEGRILELPVGATPVDFAYEVHTDVGNTCVGARVNRQAYPLSQPLISGQTVE 446

Query: 61  IITPEDPR 68
           IIT +  R
Sbjct: 447 IITAKGAR 454


>gi|29654361|ref|NP_820053.1| alanyl-tRNA synthetase [Coxiella burnetii RSA 493]
 gi|154706669|ref|YP_001424370.1| alanyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
 gi|41018200|sp|Q83CQ6|SYA_COXBU RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|205830040|sp|A9KG28|SYA_COXBN RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|29541628|gb|AAO90567.1| alanyl-tRNA synthetase [Coxiella burnetii RSA 493]
 gi|154355955|gb|ABS77417.1| alanyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
          Length = 865

 Score = 38.1 bits (87), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 32/133 (24%), Positives = 66/133 (49%), Gaps = 11/133 (8%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++ EA++ +  E  +  G ++E     +DF   +P + +EL  +E+ + + I  +
Sbjct: 552 HSATHLLHEALRRVLGERVMQKGSLVEAKRLRFDFSHAKPLTPEELQAVERLVNQQIQAN 611

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTG 192
                + ++ E+A+     KK A  + +      KE V +   G++  ++C G H   TG
Sbjct: 612 LLSTIEVMTPEEAK-----KKGA--LALFGERYGKE-VRVLEMGDFSTEICGGTHTERTG 663

Query: 193 QVKKFFKLMKVAG 205
           ++   FK++  +G
Sbjct: 664 EI-GLFKIVSESG 675


>gi|240122334|ref|ZP_04735290.1| alanyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|268680920|ref|ZP_06147782.1| alanyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|268621204|gb|EEZ53604.1| alanyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
          Length = 874

 Score = 38.1 bits (87), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 33/153 (21%), Positives = 68/153 (44%), Gaps = 17/153 (11%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWP-EVQVAIGPIIEDGFYYDFDKEQPFSS 116
           SI     ++ R+  +  HS  H+M +A++ +    V+     +  +   +D    Q  ++
Sbjct: 545 SITAKVDDEIRNANMRNHSATHLMHKALRDVLGGHVEQKGSLVTAESTRFDISHPQAVTA 604

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARE----LFESKKEAYKVEILESIPAKENVT 172
           +E+A++E+++ E I  +       +S E A++    +   +K   +V +L+         
Sbjct: 605 EEIAEVERRVNEAILANVAVNAAIMSMEDAQKTDAMMLFGEKYGDEVRVLQ--------- 655

Query: 173 LYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAG 205
               G   +LC G HV  TG +   FK++   G
Sbjct: 656 --MGGFSTELCGGTHVSRTGDI-GLFKIISEGG 685


>gi|15677445|ref|NP_274601.1| alanyl-tRNA synthetase [Neisseria meningitidis MC58]
 gi|20532266|sp|Q9JYG6|SYA_NEIMB RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|7226845|gb|AAF41948.1| alanyl-tRNA synthetase [Neisseria meningitidis MC58]
          Length = 874

 Score = 38.1 bits (87), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 36/178 (20%), Positives = 76/178 (42%), Gaps = 18/178 (10%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSS 116
           S+     ++ R+  +  HS  H+M +A++ +    V+     +  +   +D    Q  ++
Sbjct: 545 SVTAKVDDEIRNANMRNHSATHLMHKALRDVLGRHVEQKGSLVTAESTRFDISHPQAVTA 604

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARE----LFESKKEAYKVEILESIPAKENVT 172
           +E+A++E+++ E I  +       +S E A++    +   +K   +V +L+         
Sbjct: 605 EEIAEVERRVNEAILANVAVNAAIMSMEDAQKTGAMMLFGEKYGEEVRVLQ--------- 655

Query: 173 LYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQE 230
               G   +LC G HV  TG +   FK++   G    G      ++ +    W  +QE
Sbjct: 656 --MGGFSTELCGGTHVSRTGDI-GLFKIIS-EGGIAAGVRRIEAITGLNALKWAQEQE 709


>gi|325140755|gb|EGC63269.1| alanyl-tRNA synthetase [Neisseria meningitidis CU385]
          Length = 881

 Score = 38.1 bits (87), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 36/178 (20%), Positives = 76/178 (42%), Gaps = 18/178 (10%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSS 116
           S+     ++ R+  +  HS  H+M +A++ +    V+     +  +   +D    Q  ++
Sbjct: 552 SVTAKVDDEIRNANMRNHSATHLMHKALRDVLGRHVEQKGSLVTAESTRFDISHPQAVTA 611

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARE----LFESKKEAYKVEILESIPAKENVT 172
           +E+A++E+++ E I  +       +S E A++    +   +K   +V +L+         
Sbjct: 612 EEIAEVERRVNEAILANVAVNAAIMSMEDAQKTGAMMLFGEKYGEEVRVLQ--------- 662

Query: 173 LYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQE 230
               G   +LC G HV  TG +   FK++   G    G      ++ +    W  +QE
Sbjct: 663 --MGGFSTELCGGTHVSRTGDI-GLFKIIS-EGGIAAGVRRIEAITGLNALKWAQEQE 716


>gi|157373475|ref|YP_001472075.1| bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis
           pyrophosphate 3'-pyrophosphohydrolase [Shewanella
           sediminis HAW-EB3]
 gi|157315849|gb|ABV34947.1| GTP diphosphokinase [Shewanella sediminis HAW-EB3]
          Length = 701

 Score = 38.1 bits (87), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 1/68 (1%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIE 60
           P +I +  P+G I   PV AT  D A  +   +    V   +N +   LS P+  G ++E
Sbjct: 387 PEEIYVFTPEGRILELPVGATPVDFAYEVHTDVGNTCVGARVNRQAYPLSQPLISGQTVE 446

Query: 61  IITPEDPR 68
           IIT +  R
Sbjct: 447 IITAKGAR 454


>gi|83647875|ref|YP_436310.1| alanyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
 gi|123531367|sp|Q2SBT9|SYA_HAHCH RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|83635918|gb|ABC31885.1| alanyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
          Length = 876

 Score = 38.1 bits (87), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 35/159 (22%), Positives = 66/159 (41%), Gaps = 28/159 (17%)

Query: 54  VREGSIEI---ITPE---DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYY 106
           V EG I++   +T E     R    + HS  H++  A++ +  +     G +++ +   +
Sbjct: 535 VSEGEIKVGQTVTAEVDRHKRKATALNHSATHLLHAALRKVLGDHVAQKGSLVDPERLRF 594

Query: 107 DFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEI 161
           DF   +P + +++ Q+E  +   I  ++    + +  + ARE     LF  K        
Sbjct: 595 DFAHFEPMTQEQIRQVESIVNAQIRANTSVSTEVMGMDAARERGAMALFGEKY------- 647

Query: 162 LESIPAKENVTLYRQGE---WFDLCRGPHVRSTGQVKKF 197
                  + V +   GE     +LC G HV  TG +  F
Sbjct: 648 ------GDTVRVLAMGESDFSIELCGGTHVERTGDIGMF 680


>gi|85708967|ref|ZP_01040033.1| AlaS, alanyl-tRNA synthetase [Erythrobacter sp. NAP1]
 gi|85690501|gb|EAQ30504.1| AlaS, alanyl-tRNA synthetase [Erythrobacter sp. NAP1]
          Length = 887

 Score = 38.1 bits (87), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 53/250 (21%), Positives = 106/250 (42%), Gaps = 39/250 (15%)

Query: 24  SDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAE 83
           +D ++ + R  A +A   A   KV D        ++++    + R+     HS  H++  
Sbjct: 522 TDTSKPLGRLHAHQARITAGKVKVGD--------NVQLDVDAERRTQIRANHSATHLVHA 573

Query: 84  AVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLS 142
           A+++   +     G ++ ++   +DF   +P S++++  IE ++   I  + P   + +S
Sbjct: 574 ALRNQLGDHVTQKGSLVSQERLRFDFSHPKPLSAEDIVAIEDEVNAEILANEPVGTRLMS 633

Query: 143 HEKARE-----LFESK--KEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVK 195
            + A E     LF  K   E   + +  S  +  N ++       +LC G HV +TG + 
Sbjct: 634 PDDAVEAGALALFGEKYGDEVRVLSMGRSGGSGRNYSV-------ELCGGTHVSATGDI- 685

Query: 196 KFFKLMK---VAGAYWR-----GDSNR-------PMLSRIYGTAWNTQQELTQYLYFLEE 240
             F+++    V+    R     GD+ R         L  + G    T +E+   +  L +
Sbjct: 686 GLFRIVSEGAVSSGVRRIEALTGDAARNWLVAREEALKSVAGAIRATPEEVPARVAALLD 745

Query: 241 SEKRDHRKLA 250
             KR  ++LA
Sbjct: 746 ERKRLEKELA 755


>gi|293399698|ref|ZP_06643850.1| alanyl-tRNA synthetase [Neisseria gonorrhoeae F62]
 gi|291609949|gb|EFF39072.1| alanyl-tRNA synthetase [Neisseria gonorrhoeae F62]
          Length = 881

 Score = 38.1 bits (87), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 37/178 (20%), Positives = 76/178 (42%), Gaps = 18/178 (10%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWP-EVQVAIGPIIEDGFYYDFDKEQPFSS 116
           SI     ++ R+  +  HS  H+M +A++ +    V+     +  +   +D    Q  ++
Sbjct: 552 SITAKVDDEIRNANMRNHSATHLMHKALRDVLGGHVEQKGSLVTAESTRFDISHPQAVTA 611

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARE----LFESKKEAYKVEILESIPAKENVT 172
           +E+A++E+++ E I  +       +S E A++    +   +K   +V +L+         
Sbjct: 612 EEIAEVERRVNEAILANVAVNAAIMSMEDAQKTDAMMLFGEKYGDEVRVLQ--------- 662

Query: 173 LYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQE 230
               G   +LC G HV  TG +   FK++   G    G      ++ +    W  +QE
Sbjct: 663 --MGGFSTELCGGTHVSRTGDI-GLFKIIS-EGGIAAGVRRIEAITGLNALKWAQEQE 716


>gi|293392770|ref|ZP_06637088.1| alanine-tRNA ligase [Serratia odorifera DSM 4582]
 gi|291424629|gb|EFE97840.1| alanine-tRNA ligase [Serratia odorifera DSM 4582]
          Length = 875

 Score = 38.1 bits (87), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 36/181 (19%), Positives = 77/181 (42%), Gaps = 21/181 (11%)

Query: 24  SDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAE 83
           S  AE +     K   A+   GK+      V + S++ +  +  R+   + HS  H++  
Sbjct: 514 SAAAEFVVGDTQKYGQAIGHQGKLAQGVLKVGD-SVDALIDQVRRNRIRLNHSATHLLHA 572

Query: 84  AVQSIWPEVQVAIGPIIEDGFY-YDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLS 142
           A++ +  E     G ++ D +  +DF   +    +++  +E  + + + R+ P   + ++
Sbjct: 573 ALRQVLGEHVAQKGSLVNDKYLRFDFSHFEAMKPEQIRAVEDLVNQQVRRNLPVQTEVMA 632

Query: 143 HEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKK 196
            + A+E     LF  K +             ++V +   G++  +LC G H   TG +  
Sbjct: 633 LDDAKEKGAMALFGEKYD-------------DHVRVLTMGDFSTELCGGTHASRTGDIGL 679

Query: 197 F 197
           F
Sbjct: 680 F 680


>gi|149924644|ref|ZP_01912997.1| GTP pyrophosphokinase [Plesiocystis pacifica SIR-1]
 gi|149814497|gb|EDM74085.1| GTP pyrophosphokinase [Plesiocystis pacifica SIR-1]
          Length = 852

 Score = 38.1 bits (87), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 3/60 (5%)

Query: 10  PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPR 68
           P+G +K F   AT  D A ++   L  +A    +NG+V  L   +R+G ++E+IT  DPR
Sbjct: 506 PEGDLKTFAKGATPIDFAFAVHTDLGLQAAGARVNGQVVPLRYKLRQGDTVEVIT--DPR 563


>gi|228475198|ref|ZP_04059924.1| alanine--tRNA ligase [Staphylococcus hominis SK119]
 gi|228270809|gb|EEK12211.1| alanine--tRNA ligase [Staphylococcus hominis SK119]
          Length = 876

 Score = 38.1 bits (87), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 32/137 (23%), Positives = 62/137 (45%), Gaps = 17/137 (12%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++  A++ I  E     G ++E +   +DF    P + +E+ Q+E+++ E I R 
Sbjct: 565 HSATHLLHAALKEILGEHVNQAGSLVESERLRFDFSHFGPMTEEEIDQVERRVNEEIWRG 624

Query: 134 SPFLKQYLSHEKAREL----FESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
                Q +  ++A+E+       +K    V ++   P              +LC G HV 
Sbjct: 625 ISVHIQEMPIQEAKEMGAMALFGEKYGDIVRVVNMAPFS-----------IELCGGIHVD 673

Query: 190 STGQVKKFFKLMKVAGA 206
           +T ++   FK++  +G 
Sbjct: 674 NTAEI-GLFKIVSESGT 689


>gi|212212531|ref|YP_002303467.1| alanyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
 gi|212010941|gb|ACJ18322.1| alanyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
          Length = 865

 Score = 38.1 bits (87), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 32/133 (24%), Positives = 66/133 (49%), Gaps = 11/133 (8%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++ EA++ +  E  +  G ++E     +DF   +P + +EL  +E+ + + I  +
Sbjct: 552 HSATHLLHEALRRVLGERVMQKGSLVEAKRLRFDFSHAKPLTPEELQAVERLVNQQIQAN 611

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTG 192
                + ++ E+A+     KK A  + +      KE V +   G++  ++C G H   TG
Sbjct: 612 LLSTIEVMTPEEAK-----KKGA--LALFGERYGKE-VRVLEMGDFSTEICGGTHTERTG 663

Query: 193 QVKKFFKLMKVAG 205
           ++   FK++  +G
Sbjct: 664 EI-GLFKIVSESG 675


>gi|59801613|ref|YP_208325.1| hypothetical protein NGO1254 [Neisseria gonorrhoeae FA 1090]
 gi|75432448|sp|Q5F7C4|SYA_NEIG1 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|59718508|gb|AAW89913.1| putative alanyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090]
          Length = 874

 Score = 38.1 bits (87), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 37/178 (20%), Positives = 76/178 (42%), Gaps = 18/178 (10%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWP-EVQVAIGPIIEDGFYYDFDKEQPFSS 116
           SI     ++ R+  +  HS  H+M +A++ +    V+     +  +   +D    Q  ++
Sbjct: 545 SITAKVDDEIRNANMRNHSATHLMHKALRDVLGGHVEQKGSLVTAESTRFDISHPQAVTA 604

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARE----LFESKKEAYKVEILESIPAKENVT 172
           +E+A++E+++ E I  +       +S E A++    +   +K   +V +L+         
Sbjct: 605 EEIAEVERRVNEAILANVAVNAAIMSMEDAQKTDAMMLFGEKYGDEVRVLQ--------- 655

Query: 173 LYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQE 230
               G   +LC G HV  TG +   FK++   G    G      ++ +    W  +QE
Sbjct: 656 --MGGFSTELCGGTHVSRTGDI-GLFKIIS-EGGIAAGVRRIEAITGLNALKWAQEQE 709


>gi|153206762|ref|ZP_01945603.1| alanyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
 gi|165918516|ref|ZP_02218602.1| alanyl-tRNA synthetase [Coxiella burnetii RSA 334]
 gi|212218396|ref|YP_002305183.1| alanyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
 gi|120577125|gb|EAX33749.1| alanyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
 gi|165917762|gb|EDR36366.1| alanyl-tRNA synthetase [Coxiella burnetii RSA 334]
 gi|212012658|gb|ACJ20038.1| alanyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
          Length = 865

 Score = 38.1 bits (87), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 32/133 (24%), Positives = 66/133 (49%), Gaps = 11/133 (8%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++ EA++ +  E  +  G ++E     +DF   +P + +EL  +E+ + + I  +
Sbjct: 552 HSATHLLHEALRRVLGERVMQKGSLVEAKRLRFDFSHAKPLTPEELQAVERLVNQQIQAN 611

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTG 192
                + ++ E+A+     KK A  + +      KE V +   G++  ++C G H   TG
Sbjct: 612 LLSTIEVMTPEEAK-----KKGA--LALFGERYGKE-VRVLEMGDFSTEICGGTHTERTG 663

Query: 193 QVKKFFKLMKVAG 205
           ++   FK++  +G
Sbjct: 664 EI-GLFKIVSESG 675


>gi|314936266|ref|ZP_07843613.1| alanine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
 gi|313654885|gb|EFS18630.1| alanine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
          Length = 876

 Score = 37.7 bits (86), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 32/137 (23%), Positives = 62/137 (45%), Gaps = 17/137 (12%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++  A++ I  E     G ++E +   +DF    P + +E+ Q+E+++ E I R 
Sbjct: 565 HSATHLLHAALKEILGEHVNQAGSLVESERLRFDFSHFGPMTKEEIDQVERRVNEEIWRG 624

Query: 134 SPFLKQYLSHEKAREL----FESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
                Q +  ++A+E+       +K    V ++   P              +LC G HV 
Sbjct: 625 ISVHIQEMPIQEAKEMGAMALFGEKYGDIVRVVNMAPFS-----------IELCGGIHVD 673

Query: 190 STGQVKKFFKLMKVAGA 206
           +T ++   FK++  +G 
Sbjct: 674 NTAEI-GLFKIVSESGT 689


>gi|291614561|ref|YP_003524718.1| alanyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1]
 gi|291584673|gb|ADE12331.1| alanyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1]
          Length = 873

 Score = 37.7 bits (86), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 61/141 (43%), Gaps = 14/141 (9%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKM 126
           RS  +  HS  H+M +A++ +    VQ     +  D   +DF   QP S  E+ ++E  +
Sbjct: 556 RSRTMRNHSATHLMHKALREVLGTHVQQKGSQVDADKTRFDFVHTQPMSDAEIRKVEAIV 615

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK--ENVTLYRQGEWFDLCR 184
              I          LS+ + +      +EA K   +     K  + V +   G   +LC 
Sbjct: 616 NAEI----------LSNAECQSRVMPIEEAQKTGAMMLFGEKYGDVVRVLNIGSSIELCG 665

Query: 185 GPHVRSTGQVKKFFKLMKVAG 205
           G HV+ TG +   FK++  +G
Sbjct: 666 GTHVKRTGDI-GLFKIVAESG 685


>gi|34581082|ref|ZP_00142562.1| alanyl-tRNA synthetase [Rickettsia sibirica 246]
 gi|28262467|gb|EAA25971.1| alanyl-tRNA synthetase [Rickettsia sibirica 246]
          Length = 878

 Score = 37.7 bits (86), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 57/129 (44%), Gaps = 14/129 (10%)

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY-YDFDKEQPFSSDELAQIEKKMQEIIA 131
           I HS  HI+   +  +  +     G ++   +  +D    +  +++E+  IE K+ EII 
Sbjct: 565 IHHSATHILHAVLHEVLGKHVTQKGSLVAPTYLRFDISHSKAVTNEEITLIEDKVNEII- 623

Query: 132 RDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK--ENVTLYRQGEW-FDLCRGPHV 188
           RD+        HE    L  + ++A K   +     K    V + + GE   +LC G HV
Sbjct: 624 RDN--------HEVTTTLM-ATEDAIKQGAMALFGEKYDSEVRVVKMGETSLELCGGTHV 674

Query: 189 RSTGQVKKF 197
           R TG +  F
Sbjct: 675 RRTGDIGCF 683


>gi|28211584|ref|NP_782528.1| histidyl-tRNA synthetase [Clostridium tetani E88]
 gi|32130099|sp|Q892X7|SYH_CLOTE RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|28204025|gb|AAO36465.1| histidyl-tRNA synthetase [Clostridium tetani E88]
          Length = 439

 Score = 37.7 bits (86), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 23/88 (26%), Positives = 44/88 (50%), Gaps = 1/88 (1%)

Query: 554 QAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
           QA+V  +    +EY+ ++AN L+ + +  E    +  I  K       KIP +I+ G+ E
Sbjct: 350 QALVIPV-GDTMEYSIKVANKLRENEIISELYLEDAKIGKKFAYADKLKIPYVILIGEDE 408

Query: 614 ASERSIGIRRFGSTTTQKVSLLDAIPIL 641
             E  + ++   +   + +SL +AI I+
Sbjct: 409 LKEEKVSVKNMETGNQESMSLEEAIKII 436


>gi|119472239|ref|ZP_01614418.1| alanyl-tRNA synthetase [Alteromonadales bacterium TW-7]
 gi|119445057|gb|EAW26352.1| alanyl-tRNA synthetase [Alteromonadales bacterium TW-7]
          Length = 866

 Score = 37.7 bits (86), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 31/133 (23%), Positives = 60/133 (45%), Gaps = 11/133 (8%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           H+  HI+ EA++ +  E     G +++ D   +DF   +  + DEL  IE+ + + I R+
Sbjct: 555 HTATHILHEALRQLLGEHVSQKGSLVQADRLRFDFSHFEAVTKDELRDIERVVNDEIRRN 614

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTG 192
                + ++ + A+        A     L      + V +   G++  +LC G HV   G
Sbjct: 615 FALNTELMAIDDAK--------AKGAMALFGEKYDDEVRVVTIGDYSIELCGGTHVERAG 666

Query: 193 QVKKFFKLMKVAG 205
            +   FK++  +G
Sbjct: 667 DI-GLFKIVSESG 678


>gi|253582304|ref|ZP_04859527.1| fision threonyl-tRNA synthetase and uridine kinase [Fusobacterium
           varium ATCC 27725]
 gi|251835843|gb|EES64381.1| fision threonyl-tRNA synthetase and uridine kinase [Fusobacterium
           varium ATCC 27725]
          Length = 490

 Score = 37.7 bits (86), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 3/70 (4%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D R  AV   +   I  +AV  I+P+++V I   + +G Y    K +  + + + +I+KK
Sbjct: 8   DSRKYAV---TLKLIFLKAVYEIFPDIEVEIEHSLNNGTYGTVTKGEKITEEGIKKIDKK 64

Query: 126 MQEIIARDSP 135
           M+EII +  P
Sbjct: 65  MKEIIEKGYP 74


>gi|152977739|ref|YP_001343368.1| alanyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
 gi|205829971|sp|A6VKD6|SYA_ACTSZ RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|150839462|gb|ABR73433.1| alanyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
          Length = 874

 Score = 37.7 bits (86), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 29/133 (21%), Positives = 58/133 (43%), Gaps = 18/133 (13%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIED-GFYYDFDKEQPFSSDELAQIEKKM 126
           R    + HS  H++  A++ +  E     G ++ D G  +DF + +  + +++ +IE+ +
Sbjct: 556 RQYTKLNHSATHLLHAALRQVLGEHVAQKGSLVSDVGLRFDFVQPEAVTKEQIMEIERLV 615

Query: 127 QEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
              I  + P L + +   +A+      LF  +K    V ++   P              +
Sbjct: 616 NFHIRANHPVLTEEMGVAEAKSKGAIALF-GEKYGETVRVVTMSPFS-----------IE 663

Query: 182 LCRGPHVRSTGQV 194
           LC G HV  TG++
Sbjct: 664 LCGGLHVERTGEI 676


>gi|148265188|ref|YP_001231894.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacter uraniireducens Rf4]
 gi|146398688|gb|ABQ27321.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacter uraniireducens Rf4]
          Length = 716

 Score = 37.7 bits (86), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 1/63 (1%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI-E 60
           P ++ +  P G +K +P  +T  D A S+   +  + V   +NGK+  L   ++ G I E
Sbjct: 384 PEEVYVFTPKGDVKGYPKGSTPIDFAYSVHTDVGHRCVGAKVNGKLVPLKYELKNGDIVE 443

Query: 61  IIT 63
           +IT
Sbjct: 444 VIT 446


>gi|217967411|ref|YP_002352917.1| alanyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
 gi|217336510|gb|ACK42303.1| alanyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
          Length = 865

 Score = 37.7 bits (86), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 37/162 (22%), Positives = 70/162 (43%), Gaps = 12/162 (7%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY-YDFDKEQPFSSDELAQIEKKMQEIIARD 133
           H+  H++  A++       +  G ++   F  +DF    P + ++L  IE+K+ E I  +
Sbjct: 557 HTATHLLHAALREYLGTHVMQSGSLVSPEFLRFDFTHHSPLTYEDLKIIERKVNENILAN 616

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQ 193
               K + + E+A+ +        K +    I    NV++       +LC G HV  TG+
Sbjct: 617 HKVEKFWTNLEEAKRMGAIALFTEKYQKNVRIIKINNVSM-------ELCGGTHVDCTGE 669

Query: 194 VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
           +  F+ ++K  G    G   R + +     AW  Q+   + L
Sbjct: 670 IGSFY-IVKEEGI---GSGIRRIFAVCGLKAWEFQKRREEIL 707


>gi|167764982|ref|ZP_02437103.1| hypothetical protein BACSTE_03375 [Bacteroides stercoris ATCC
           43183]
 gi|167697651|gb|EDS14230.1| hypothetical protein BACSTE_03375 [Bacteroides stercoris ATCC
           43183]
          Length = 873

 Score = 37.7 bits (86), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 32/132 (24%), Positives = 58/132 (43%), Gaps = 12/132 (9%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEK 124
           D R+     HS  H++  A++ +  +     G ++  D   +DF   Q  + +E+ Q+E 
Sbjct: 554 DKRAACAANHSATHLLDAALREVLGDHVEQKGSLVTPDSLRFDFSHFQKVTDEEIRQVEH 613

Query: 125 KMQEIIARDSPFLKQY--LSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
            +   I  + P LK+Y  +  E+A+EL            L      + V + + G   + 
Sbjct: 614 IVNAKIRANIP-LKEYRNIPIEEAKEL--------GAIALFGEKYGDRVRVIQFGSSIEF 664

Query: 183 CRGPHVRSTGQV 194
           C G HV +TG +
Sbjct: 665 CGGTHVAATGNI 676


>gi|124802553|ref|XP_001347508.1| dynein heavy chain, putative [Plasmodium falciparum 3D7]
 gi|23495089|gb|AAN35421.1|AE014832_43 dynein heavy chain, putative [Plasmodium falciparum 3D7]
          Length = 5687

 Score = 37.7 bits (86), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 58/114 (50%), Gaps = 20/114 (17%)

Query: 376 SLHGLMR---VRGFTQDDAHV-----FCTKEQ----MFNE--CLKIHNLIISIYKDFGFE 421
           ++HGL R   +    +D+  +     F  K +    +FNE  C+KI+N I+ +YK    E
Sbjct: 30  NIHGLAREEVINNIKKDENTIKLLNDFYEKNEECLFIFNEKDCIKIYNSILDLYKKRKNE 89

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLD----TIKNSSQDRINTGVLLGE 471
           K ++   T P+  +    + +DAEN+++  L+       N ++D IN+  LL E
Sbjct: 90  KFLIIYKT-PQSNILYLEMNNDAENVIRNFLEIFFSNFMNKNED-INSSSLLKE 141


>gi|159902592|ref|YP_001549936.1| alanyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
 gi|205830180|sp|A9B9E5|SYA_PROM4 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|159887768|gb|ABX07982.1| Alanyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
          Length = 890

 Score = 37.7 bits (86), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 60/135 (44%), Gaps = 16/135 (11%)

Query: 68  RSLAVIRHSCAHIMAEAVQSI-WPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKM 126
           R  A I H+  H++  +++ I   E+  A   +  +   +DF    P SS+EL ++EKK+
Sbjct: 565 RRRAQINHTATHLLQASLKEIVGSEISQAGSLVSFERLRFDFHCSSPVSSEELEKVEKKI 624

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR----QGEWFDL 182
              I+     + + +  + A       K+A  V +      ++  TL R     G   +L
Sbjct: 625 NLWISESHSLVVKEMKIDDA-------KQAGAVAMF----GEKYGTLVRVVDVPGVSMEL 673

Query: 183 CRGPHVRSTGQVKKF 197
           C G HV +T  +  F
Sbjct: 674 CGGTHVANTADIGAF 688


>gi|329737303|gb|EGG73557.1| alanine--tRNA ligase [Staphylococcus epidermidis VCU028]
          Length = 552

 Score = 37.7 bits (86), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 35/166 (21%), Positives = 71/166 (42%), Gaps = 19/166 (11%)

Query: 47  VCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFY 105
           +    +  +   +E    ++ R L    HS  H++  A++ +  +     G ++E +   
Sbjct: 213 IVQFGEATQNAKVEARVNKEDRRLIQKNHSATHLLHAALKEVLGDHVNQAGSLVEPERLR 272

Query: 106 YDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVE 160
           +DF    P + +E+  +E+++ E I R      Q +S E+A+      LF  +K    V 
Sbjct: 273 FDFSHFGPMTQEEINLVERRVNEEIWRAIDVCIQEMSIEEAKSIGAMALF-GEKYGDIVR 331

Query: 161 ILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGA 206
           ++   P              +LC G HV +T ++   FK++  +G 
Sbjct: 332 VVNMAPFS-----------IELCGGIHVNNTAEI-GLFKIVSESGT 365


>gi|303236524|ref|ZP_07323109.1| alanine--tRNA ligase [Prevotella disiens FB035-09AN]
 gi|302483272|gb|EFL46282.1| alanine--tRNA ligase [Prevotella disiens FB035-09AN]
          Length = 897

 Score = 37.7 bits (86), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 35/137 (25%), Positives = 61/137 (44%), Gaps = 9/137 (6%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEK 124
           D R  +   H+  H++  A++ +  +     G  +  D   +DF   Q  + +EL Q+E+
Sbjct: 578 DKRDASAANHTATHLLDYALKQVLGDHCEQKGSYVSADTLRFDFSHFQKVTDEELRQVER 637

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
            + ++I +D   LK      +   L E+KK        E    K  V  +  G   + C 
Sbjct: 638 MVNDMIRQD---LK--CDEHRNTPLEEAKKMGAVALFGEKYGDKVRVISF--GPSCEFCG 690

Query: 185 GPHVRSTGQVKKFFKLM 201
           G H  STG++  FFK++
Sbjct: 691 GIHATSTGRI-GFFKIV 706


>gi|289422737|ref|ZP_06424577.1| phosphoribulokinase/uridine kinase [Peptostreptococcus anaerobius
           653-L]
 gi|289156916|gb|EFD05541.1| phosphoribulokinase/uridine kinase [Peptostreptococcus anaerobius
           653-L]
          Length = 550

 Score = 37.7 bits (86), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 73/165 (44%), Gaps = 7/165 (4%)

Query: 43  INGKVCDLSDPV-REGSIEIITP--EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPI 99
           IN K+ +L+  + ++  +E I    ED + L     S   +MA   + ++ E +V I   
Sbjct: 42  INNKLYNLNHILYKDSEVEFIDTLKEDGKRLYFRGLSLLLVMA--CKDLFEEAKVYINHS 99

Query: 100 IEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKV 159
           +  G Y    K+   S  ++  I+ KM E + +D      YL  ++A E F S     K 
Sbjct: 100 MSGGLYCVVKKKDSLSDKDIESIKAKMLEYVEKDLTIKCNYLPSDEAIEKFCSINWDEKA 159

Query: 160 EILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVA 204
           E+L+     + + +Y    + D   G    STG +K    L K+A
Sbjct: 160 ELLK-YRKDDIIKVYECNGYIDYFYGLMFPSTGHIKD-LDLAKMA 202


>gi|217034055|ref|ZP_03439476.1| hypothetical protein HP9810_893g2 [Helicobacter pylori 98-10]
 gi|216943450|gb|EEC22904.1| hypothetical protein HP9810_893g2 [Helicobacter pylori 98-10]
          Length = 847

 Score = 37.7 bits (86), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 32/165 (19%), Positives = 69/165 (41%), Gaps = 9/165 (5%)

Query: 42  AINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE 101
            +N  + ++   +++G   I    D R      HS  H++  A++ +        G ++E
Sbjct: 521 GLNFSLLEIKKALKKGDQVIAQVSDERLEIAKHHSATHLLQSALREVLGSHVSQAGSLVE 580

Query: 102 DG-FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVE 160
                +DF   +  + +EL ++E  +      ++   K   S  +   L ++K +     
Sbjct: 581 SKRLRFDFSHPKALNDEELEKVEDSV------NAQIFKHLTSQVEHMPLNQAKDKGALAL 634

Query: 161 ILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAG 205
             E       V  +++    +LC G HV +TG +   F+++K +G
Sbjct: 635 FSEKYAENVRVVSFKEAS-IELCGGIHVENTGLIGG-FRILKESG 677


>gi|67459169|ref|YP_246793.1| metal-dependent hydrolase [Rickettsia felis URRWXCal2]
 gi|67004702|gb|AAY61628.1| Predicted metal-dependent hydrolases [Rickettsia felis URRWXCal2]
          Length = 235

 Score = 37.7 bits (86), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 31/146 (21%), Positives = 66/146 (45%), Gaps = 22/146 (15%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           I  +  ++ R L    H+ AH++   V+ ++P ++   G       Y +F  + P    +
Sbjct: 88  INCLVDKNRRMLNSRYHTAAHLLGNIVEILYPMLKAVKGHSFPGEAYVEFQGDVPV---D 144

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFES-----KKEAYKVEILESIPAKENVTL 173
           + QI+  + + IA+++             E+FE+     +++ YK+  +  IP  +   +
Sbjct: 145 VTQIQNTVDQTIAKNN-----------KTEIFETDPISFEQQFYKLPYI--IPENKKFRV 191

Query: 174 YRQGEWFDL-CRGPHVRSTGQVKKFF 198
            R G+   + C G H+ ST ++ K  
Sbjct: 192 MRIGDMAPVPCGGTHLSSTTEIGKIL 217


>gi|326803428|ref|YP_004321246.1| alanine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
 gi|326651546|gb|AEA01729.1| alanine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
          Length = 883

 Score = 37.7 bits (86), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 32/145 (22%), Positives = 66/145 (45%), Gaps = 18/145 (12%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY-YDFDKEQPFSSDELAQIEKKM 126
           R L    H+  H++   ++ +  E     G ++++ +  +DF      SSD+L ++E+++
Sbjct: 562 RRLIRNNHTATHLLHRVLKDVLGEQVNQAGSLLDEHYLRFDFTYFGQVSSDQLEEVERRV 621

Query: 127 QEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEW-F 180
            E I    P    + + + A+E     LF  K           +   + + +    +W  
Sbjct: 622 NEKIWEQIPVETIFTTVKAAKEHGAIALFGEK----------YLKLHDEIRVINIDDWSM 671

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAG 205
           +LC G HV++TG +   FK++  +G
Sbjct: 672 ELCGGTHVKNTGFI-GLFKIISESG 695


>gi|323697575|ref|ZP_08109487.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfovibrio sp. ND132]
 gi|323457507|gb|EGB13372.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfovibrio desulfuricans
           ND132]
          Length = 737

 Score = 37.7 bits (86), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 1/55 (1%)

Query: 10  PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           P+G IK  P  AT  D A SI   +  K     +NG++  L   ++ G S+EIIT
Sbjct: 399 PNGDIKELPDGATPVDFAYSIHSEVGDKCAGAKVNGRIVPLQYRLQNGDSVEIIT 453


>gi|326529173|dbj|BAK00980.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 511

 Score = 37.7 bits (86), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 43/198 (21%), Positives = 87/198 (43%), Gaps = 23/198 (11%)

Query: 244 RDHRKLAREMDLFHI--AEDGSGVIFWHRKGWKIF--QTLISYMRRKI-KDDYEEINTPQ 298
           +DH +L +++DLF    A + SG  F++ K   +     L+++   ++ K  +  + TP+
Sbjct: 204 KDHLQLGKDLDLFDFDAASEVSGSKFYYLKNEAVLLEMALVNWGIAEVSKKGFTPLITPE 263

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++   + ++ G     RA    V   D++ + L   A  P+       +  + +    +L
Sbjct: 264 IVRSSVVERCGFQP--RAQNTQVYSIDNSDQCLIGTAEIPVG-----GIHINSILPDSDL 316

Query: 359 PVRLAEFGSVYRNE---PSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI- 414
           P++   +   +R E      +  GL RV  F++ +  +FC  E    E  K H  +I+I 
Sbjct: 317 PLKYVAYSHCFRTEAGAAGAATRGLYRVHQFSKVEMFIFCRPE----ESDKYHEELITIE 372

Query: 415 ---YKDFGFEKIMVKLST 429
              Y   G     + ++T
Sbjct: 373 ENLYASLGLHFKTLDMAT 390


>gi|322372372|ref|ZP_08046908.1| alanine--tRNA ligase [Streptococcus sp. C150]
 gi|321277414|gb|EFX54483.1| alanine--tRNA ligase [Streptococcus sp. C150]
          Length = 872

 Score = 37.7 bits (86), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 66/146 (45%), Gaps = 14/146 (9%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY-YDFDKEQPFSSDELAQIEKKMQEIIARD 133
           H+  H++  A+ +I     V  G + E  F  +DF   +  +S+EL  IE+++ E I + 
Sbjct: 567 HTATHLLHAALHNIIGNHAVQAGSLNEQEFLRFDFTHFEAVTSEELRAIEEQVNEEIWKA 626

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTG 192
           +P        + A+ +        K          +NV +   G++  +LC G HV +T 
Sbjct: 627 TPVTTIETDIDTAKSMGAMALFGEKY--------GKNVRVVSIGDYSVELCGGTHVANTA 678

Query: 193 QVKKFFKLMKVAGAYWRGDSNRPMLS 218
           ++   FK++K  G    G   R +L+
Sbjct: 679 EI-GMFKIVKEEGI---GSGTRRILA 700


>gi|116689431|ref|YP_835054.1| alanyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
 gi|116647520|gb|ABK08161.1| alanyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
          Length = 897

 Score = 37.7 bits (86), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 31/129 (24%), Positives = 60/129 (46%), Gaps = 19/129 (14%)

Query: 75  HSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H+M +A++ +    VQ     +  D   +DF    P + DE+ ++E+ +   I  +
Sbjct: 587 HSATHLMHKALREVLGAHVQQKGSLVDADKTRFDFAHNAPMTDDEIRRVEQIVNNEILAN 646

Query: 134 SPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           +P + + + +++A +     LF  +K   +V +L+   ++E            LC G HV
Sbjct: 647 APGIVRVMPYDEAVKGGAMALF-GEKYGDEVRVLDLGFSRE------------LCGGTHV 693

Query: 189 RSTGQVKKF 197
             TG +  F
Sbjct: 694 HRTGDIGLF 702


>gi|322368072|ref|ZP_08042641.1| alanyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
 gi|320552088|gb|EFW93733.1| alanyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
          Length = 923

 Score = 37.7 bits (86), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 62/145 (42%), Gaps = 8/145 (5%)

Query: 52  DPVREGSIEIITPEDPRSLAVIRHSCA-HIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFD 109
           DPV +GSI     +  R   ++RH  A HI+  A + I  + ++ A      D    D  
Sbjct: 590 DPVDKGSIVRGQIDAQRRRRLMRHHTATHIVVHAARQILGDHIRQAGAQKGTDSSRIDVR 649

Query: 110 KEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKE 169
             +    +   QIE    EI+  ++   +++ +  +A E F    + Y+      IPA  
Sbjct: 650 HYERIDRETAKQIELLANEIVMENTTVQQEWPNRHEAEEEF--GFDLYQG----GIPAGT 703

Query: 170 NVTLYRQGEWFDLCRGPHVRSTGQV 194
           N+ L    E    C G HVR TG V
Sbjct: 704 NIRLIHVAEDVQACGGTHVRRTGDV 728


>gi|107022482|ref|YP_620809.1| alanyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
 gi|105892671|gb|ABF75836.1| alanyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
          Length = 897

 Score = 37.7 bits (86), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 31/129 (24%), Positives = 60/129 (46%), Gaps = 19/129 (14%)

Query: 75  HSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H+M +A++ +    VQ     +  D   +DF    P + DE+ ++E+ +   I  +
Sbjct: 587 HSATHLMHKALREVLGAHVQQKGSLVDADKTRFDFAHNAPMTDDEIRRVEQIVNNEILAN 646

Query: 134 SPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           +P + + + +++A +     LF  +K   +V +L+   ++E            LC G HV
Sbjct: 647 APGIVRVMPYDEAVKGGAMALF-GEKYGDEVRVLDLGFSRE------------LCGGTHV 693

Query: 189 RSTGQVKKF 197
             TG +  F
Sbjct: 694 HRTGDIGLF 702


>gi|254415207|ref|ZP_05028969.1| alanyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420]
 gi|196178013|gb|EDX73015.1| alanyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420]
          Length = 877

 Score = 37.7 bits (86), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 60/141 (42%), Gaps = 13/141 (9%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKM 126
           R  A   H+  H++  A++ I  P +  A   +  D   +DF+  +  +S+EL QIE ++
Sbjct: 555 RRRAQANHTATHLLQAALKKIVDPSISQAGSLVAFDRLRFDFNCSRSLTSEELTQIEDQI 614

Query: 127 QEIIAR--DSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
              IA    +      L+  KA+       E Y         A E   +   G   +LC 
Sbjct: 615 NTWIAEAHGADVAIMPLTDAKAKGAIAMFGEKY---------ADEVRVIDFPGVSMELCG 665

Query: 185 GPHVRSTGQVKKFFKLMKVAG 205
           G HV +T ++   FK++   G
Sbjct: 666 GTHVNNTAEI-GVFKIVAETG 685


>gi|294788161|ref|ZP_06753404.1| alanine--tRNA ligase [Simonsiella muelleri ATCC 29453]
 gi|294483592|gb|EFG31276.1| alanine--tRNA ligase [Simonsiella muelleri ATCC 29453]
          Length = 873

 Score = 37.7 bits (86), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 31/142 (21%), Positives = 63/142 (44%), Gaps = 11/142 (7%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D R   +  HS  H+M +A++ +    V+     +  +   +D    Q  + +E+A++E+
Sbjct: 553 DIRDANMRNHSATHLMHKALREVLGNHVEQKGSLVTAESTRFDISHNQAITPEEIAEVER 612

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLC 183
           ++   I  +       +S E A++            +L      + V + + GE+  +LC
Sbjct: 613 RVNTAILANVAVDANIMSMEDAQKT--------GAMMLFGEKYGDEVRVLQMGEFSTELC 664

Query: 184 RGPHVRSTGQVKKFFKLMKVAG 205
            G HV  TG +   FK++  +G
Sbjct: 665 GGTHVARTGDI-GLFKIISESG 685


>gi|238756253|ref|ZP_04617569.1| Alanyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
 gi|238705508|gb|EEP97909.1| Alanyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
          Length = 874

 Score = 37.7 bits (86), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 31/155 (20%), Positives = 67/155 (43%), Gaps = 21/155 (13%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY-YDFDKEQPFSS 116
           S++ +     R+   + HS  H++  A++    E     G ++ D +  +DF   +    
Sbjct: 546 SVDAVVDSMRRNRIRLNHSATHLLHAALRKTLGEHVAQKGSLVNDKYLRFDFSHFEAMKP 605

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENV 171
           +++ Q+E  +   I R+ P   + +  ++A+E     LF  K +             + V
Sbjct: 606 EQIRQVEDLVNAQIRRNLPIQTELMELDEAKEKGAMALFGEKYD-------------DQV 652

Query: 172 TLYRQGEW-FDLCRGPHVRSTGQVKKFFKLMKVAG 205
            +   G++  +LC G H   TG +   F+++  +G
Sbjct: 653 RVLTMGDFSTELCGGIHANRTGDI-GLFRILTESG 686


>gi|205830048|sp|A0K6N4|SYA_BURCH RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
          Length = 874

 Score = 37.7 bits (86), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 31/129 (24%), Positives = 60/129 (46%), Gaps = 19/129 (14%)

Query: 75  HSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H+M +A++ +    VQ     +  D   +DF    P + DE+ ++E+ +   I  +
Sbjct: 564 HSATHLMHKALREVLGAHVQQKGSLVDADKTRFDFAHNAPMTDDEIRRVEQIVNNEILAN 623

Query: 134 SPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           +P + + + +++A +     LF  +K   +V +L+   ++E            LC G HV
Sbjct: 624 APGIVRVMPYDEAVKGGAMALF-GEKYGDEVRVLDLGFSRE------------LCGGTHV 670

Query: 189 RSTGQVKKF 197
             TG +  F
Sbjct: 671 HRTGDIGLF 679


>gi|149911059|ref|ZP_01899687.1| alanyl-tRNA synthetase [Moritella sp. PE36]
 gi|149805885|gb|EDM65873.1| alanyl-tRNA synthetase [Moritella sp. PE36]
          Length = 873

 Score = 37.7 bits (86), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 31/140 (22%), Positives = 64/140 (45%), Gaps = 21/140 (15%)

Query: 73  IRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIA 131
           + HS  H+   A++ +  + VQ     ++ +   +DF   +  +  +L ++E+ +   I 
Sbjct: 560 LNHSVTHLAHAALRKVVGDNVQQKGSLVLPERLRFDFSHFEGVTPAQLIEVERLVNAQIR 619

Query: 132 RDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRG 185
            +   + + +  + ARE     LF  K +             + V + R G++  +LC G
Sbjct: 620 ANHEVVTEVMDIDAAREAGAMALFGEKYD-------------DEVRVVRMGDFSIELCGG 666

Query: 186 PHVRSTGQVKKFFKLMKVAG 205
            HV+ TG +  FFK++  +G
Sbjct: 667 THVKRTGDI-GFFKILSESG 685


>gi|119773405|ref|YP_926145.1| bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis
           pyrophosphate 3'-pyrophosphohydrolase [Shewanella
           amazonensis SB2B]
 gi|119765905|gb|ABL98475.1| (p)ppGpp synthetase I, SpoT/RelA [Shewanella amazonensis SB2B]
          Length = 699

 Score = 37.7 bits (86), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 1/68 (1%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIE 60
           P +I +  P+G I   PV AT  D A  +   +    V   +N +   LS P+  G ++E
Sbjct: 386 PDEIYVFTPEGRILELPVGATAVDFAYEVHTDVGNTCVGARVNRQAYPLSQPLISGQTVE 445

Query: 61  IITPEDPR 68
           IIT +  +
Sbjct: 446 IITAKGAK 453


>gi|238791374|ref|ZP_04635013.1| Alanyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
 gi|238729507|gb|EEQ21022.1| Alanyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
          Length = 875

 Score = 37.7 bits (86), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 30/140 (21%), Positives = 61/140 (43%), Gaps = 21/140 (15%)

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY-YDFDKEQPFSSDELAQIEKKMQEIIA 131
           + HS  H++  A++    E     G ++ D +  +DF   +    +++ Q+E  + E I 
Sbjct: 562 LNHSATHLLHAALRKTLGEHVAQKGSLVNDKYLRFDFSHFEAMKPEQIRQVEDLVNEQIR 621

Query: 132 RDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRG 185
           R+ P   + +  + A+E     LF  K +             + V +   G++  +LC G
Sbjct: 622 RNLPVQTEVMELDTAKEKGAMALFGEKYD-------------DQVRVLTMGDFSTELCGG 668

Query: 186 PHVRSTGQVKKFFKLMKVAG 205
            H   TG +   F+++  +G
Sbjct: 669 IHASRTGDI-GLFRILSESG 687


>gi|255690436|ref|ZP_05414111.1| alanine--tRNA ligase [Bacteroides finegoldii DSM 17565]
 gi|260623884|gb|EEX46755.1| alanine--tRNA ligase [Bacteroides finegoldii DSM 17565]
          Length = 872

 Score = 37.7 bits (86), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 32/132 (24%), Positives = 58/132 (43%), Gaps = 12/132 (9%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEK 124
           D R+     HS  H++  A++ +  E     G ++  D   +DF   Q  + +E+ ++E 
Sbjct: 554 DKRAACAANHSATHLLDSALREVLGEHVEQKGSLVTPDSLRFDFSHFQKVTDEEIRKVEH 613

Query: 125 KMQEIIARDSPFLKQY--LSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
            +   I  + P LK+Y  +  E+A+EL        K          + V + + G   + 
Sbjct: 614 IVNAKIRANIP-LKEYRNIPIEEAKELGAIALFGEKY--------GDRVRVIQFGSSIEF 664

Query: 183 CRGPHVRSTGQV 194
           C G HV +TG +
Sbjct: 665 CGGTHVAATGNI 676


>gi|205830050|sp|Q1BX19|SYA_BURCA RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
          Length = 874

 Score = 37.7 bits (86), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 31/129 (24%), Positives = 60/129 (46%), Gaps = 19/129 (14%)

Query: 75  HSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H+M +A++ +    VQ     +  D   +DF    P + DE+ ++E+ +   I  +
Sbjct: 564 HSATHLMHKALREVLGAHVQQKGSLVDADKTRFDFAHNAPMTDDEIRRVEQIVNNEILAN 623

Query: 134 SPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           +P + + + +++A +     LF  +K   +V +L+   ++E            LC G HV
Sbjct: 624 APGIVRVMPYDEAVKGGAMALF-GEKYGDEVRVLDLGFSRE------------LCGGTHV 670

Query: 189 RSTGQVKKF 197
             TG +  F
Sbjct: 671 HRTGDIGLF 679


>gi|70726302|ref|YP_253216.1| alanyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
 gi|83305859|sp|Q4L6W5|SYA_STAHJ RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|68447026|dbj|BAE04610.1| alanyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
          Length = 876

 Score = 37.7 bits (86), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 33/146 (22%), Positives = 63/146 (43%), Gaps = 17/146 (11%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEK 124
           D R      HS  H++  A++ +  E     G ++E +   +DF    P + DE+ Q+E+
Sbjct: 556 DERKDIQKNHSATHLLHAALKEVLGEHVNQAGSLVESERLRFDFSHFGPMTQDEIDQVER 615

Query: 125 KMQEIIARDSPFLKQYLSHEKAREL----FESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           ++ E I R      Q +   +A+++       +K    V ++   P              
Sbjct: 616 RVNEEIWRGISVNIQEMPINEAKQMGAMALFGEKYGDIVRVVNMAPFS-----------I 664

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGA 206
           +LC G HV +T ++   FK++  +G 
Sbjct: 665 ELCGGIHVDNTAEI-GLFKIISESGT 689


>gi|51893138|ref|YP_075829.1| alanyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
 gi|59798515|sp|Q67MV8|SYA_SYMTH RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|51856827|dbj|BAD40985.1| alanyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
          Length = 872

 Score = 37.7 bits (86), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 38/161 (23%), Positives = 73/161 (45%), Gaps = 18/161 (11%)

Query: 54  VREGSIEIITPEDPRSLAVIR------HSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYY 106
           V+EG +E+    + R  A  R      H+  H++ +A++ +    VQ A   +  D   +
Sbjct: 544 VQEGFLEVGQQVEARVDARKRKDTQKNHTATHLLHKALREVLGTHVQQAGSLVAPDRLRF 603

Query: 107 DFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESK--KEAYKVEILES 164
           DF    P + +++A +E+ +   I    P     +  ++AR L       E Y  EI+  
Sbjct: 604 DFTHTGPMTPEQIAAVEEMINAEIEAAEPVTWTEMPLDEARALGAMALFGEKYG-EIVRV 662

Query: 165 IPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAG 205
           +   +  +        +LC G HV +T +V ++FK++  +G
Sbjct: 663 VSVGDGWSR-------ELCGGCHVSNTSEV-QYFKILSESG 695


>gi|302517973|ref|ZP_07270315.1| alanyl-tRNA synthetase [Streptomyces sp. SPB78]
 gi|302426868|gb|EFK98683.1| alanyl-tRNA synthetase [Streptomyces sp. SPB78]
          Length = 889

 Score = 37.7 bits (86), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 36/149 (24%), Positives = 66/149 (44%), Gaps = 16/149 (10%)

Query: 54  VREGSIEIITP-----EDPRSLAVIR-HSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYY 106
           V+ G I +  P     +  R  A+ R HS  H+  +A++          G   + G F +
Sbjct: 546 VQVGEITVDAPVWAAIDQGRRRAIARAHSATHLTHQALRDALGPTAAQAGSENQPGRFRF 605

Query: 107 DFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIP 166
           DF       +  +  +E+++ E++A +     + +S      + E+KK+    E  E   
Sbjct: 606 DFGSPAAVPTAVMTDVEQRINEVLAHEMDVQAEVMS------IDEAKKQGAIAEFGEKY- 658

Query: 167 AKENVTLYRQGEWF-DLCRGPHVRSTGQV 194
             E V +   G++  +LC G HVR+T Q+
Sbjct: 659 -GERVRVVTIGDFSKELCGGTHVRNTAQL 686


>gi|240127048|ref|ZP_04739709.1| alanyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
          Length = 881

 Score = 37.7 bits (86), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 36/178 (20%), Positives = 76/178 (42%), Gaps = 18/178 (10%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWP-EVQVAIGPIIEDGFYYDFDKEQPFSS 116
           S+     ++ R+  +  HS  H+M +A++ +    V+     +  +   +D    Q  ++
Sbjct: 552 SVTAKVDDEIRNANMRNHSATHLMHKALRDVLGGHVEQKGSLVTAESTRFDISHPQAVTA 611

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARE----LFESKKEAYKVEILESIPAKENVT 172
           +E+A++E+++ E I  +       +S E A++    +   +K   +V +L+         
Sbjct: 612 EEIAEVERRVNEAILANVAVNAAIMSMEDAQKTDAMMLFGEKYGDEVRVLQ--------- 662

Query: 173 LYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQE 230
               G   +LC G HV  TG +   FK++   G    G      ++ +    W  +QE
Sbjct: 663 --MGGFSTELCGGTHVSRTGDI-GLFKIIS-EGGIAAGVRRIEAITGLNALKWAQEQE 716


>gi|318057084|ref|ZP_07975807.1| alanyl-tRNA synthetase [Streptomyces sp. SA3_actG]
 gi|318077856|ref|ZP_07985188.1| alanyl-tRNA synthetase [Streptomyces sp. SA3_actF]
 gi|333028349|ref|ZP_08456413.1| putative alanyl-tRNA synthetase [Streptomyces sp. Tu6071]
 gi|332748201|gb|EGJ78642.1| putative alanyl-tRNA synthetase [Streptomyces sp. Tu6071]
          Length = 889

 Score = 37.7 bits (86), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 36/149 (24%), Positives = 66/149 (44%), Gaps = 16/149 (10%)

Query: 54  VREGSIEIITP-----EDPRSLAVIR-HSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYY 106
           V+ G I +  P     +  R  A+ R HS  H+  +A++          G   + G F +
Sbjct: 546 VQVGEITVDAPVWAAIDQGRRRAIARAHSATHLTHQALRDALGPTAAQAGSENQPGRFRF 605

Query: 107 DFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIP 166
           DF       +  +  +E+++ E++A +     + +S      + E+KK+    E  E   
Sbjct: 606 DFGSPAAVPTAVMTDVEQRINEVLAHEMDVQAEVMS------IDEAKKQGAIAEFGEKY- 658

Query: 167 AKENVTLYRQGEWF-DLCRGPHVRSTGQV 194
             E V +   G++  +LC G HVR+T Q+
Sbjct: 659 -GERVRVVTIGDFSKELCGGTHVRNTAQL 686


>gi|108563608|ref|YP_627924.1| alanyl-tRNA synthetase [Helicobacter pylori HPAG1]
 gi|122386244|sp|Q1CS22|SYA_HELPH RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|107837381|gb|ABF85250.1| alanyl-tRNA synthetase [Helicobacter pylori HPAG1]
          Length = 847

 Score = 37.7 bits (86), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 33/165 (20%), Positives = 70/165 (42%), Gaps = 9/165 (5%)

Query: 42  AINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE 101
            +N  + ++   +++G   I    D R      HS  H++  A++ +        G ++E
Sbjct: 521 GLNFSLLEIKKALKKGDQVIAQVSDERLEIAKHHSATHLLQSALREVLGSHVSQAGSLVE 580

Query: 102 DG-FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVE 160
                +DF   +  + +EL ++E  +      ++   K   SH +   L ++K +     
Sbjct: 581 SKRLRFDFSHPKVLNDEELEKVEDLV------NAQIFKHLNSHVEHMPLNQAKDKGALAL 634

Query: 161 ILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAG 205
             E       V  +++    +LC G HV +TG +   F+++K +G
Sbjct: 635 FGEKYAENVRVVSFKEAS-IELCGGIHVENTGLIGG-FRIVKESG 677


>gi|291545648|emb|CBL18756.1| (p)ppGpp synthetase, RelA/SpoT family [Ruminococcus sp. SR1/5]
          Length = 774

 Score = 37.7 bits (86), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 1/60 (1%)

Query: 10  PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPEDPR 68
           P G +K  P  +T  D A S+  ++  K V   +NGK+  +   ++ G  IEIIT ++ +
Sbjct: 438 PQGDVKTLPNGSTPIDFAYSVHSAVGNKMVGARVNGKLVPIEYKIKNGDRIEIITSQNSQ 497


>gi|270294506|ref|ZP_06200708.1| alanyl-tRNA synthetase [Bacteroides sp. D20]
 gi|270275973|gb|EFA21833.1| alanyl-tRNA synthetase [Bacteroides sp. D20]
          Length = 872

 Score = 37.7 bits (86), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 32/132 (24%), Positives = 59/132 (44%), Gaps = 12/132 (9%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEK 124
           D R+     HS  H++  A++ +  E     G ++  D   +DF   Q  + +E+ ++E 
Sbjct: 554 DKRAACAANHSATHLLDAALREVLGEHVEQKGSLVTPDSLRFDFSHFQKVTDEEIRKVEH 613

Query: 125 KMQEIIARDSPFLKQY--LSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
            +   I  + P LK+Y  +  E+A+EL            L      ++V + + G   + 
Sbjct: 614 IVNAKIRANIP-LKEYRNIPIEEAKEL--------GAIALFGEKYGDHVRVIQFGSSVEF 664

Query: 183 CRGPHVRSTGQV 194
           C G HV +TG +
Sbjct: 665 CGGTHVAATGNI 676


>gi|164688540|ref|ZP_02212568.1| hypothetical protein CLOBAR_02185 [Clostridium bartlettii DSM
           16795]
 gi|164602953|gb|EDQ96418.1| hypothetical protein CLOBAR_02185 [Clostridium bartlettii DSM
           16795]
          Length = 879

 Score = 37.7 bits (86), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 39/165 (23%), Positives = 72/165 (43%), Gaps = 27/165 (16%)

Query: 54  VREGSIEI------ITPEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYY 106
           V++GSI        +   + R  +   HS  H++ +A++    E V  A   +  +   +
Sbjct: 539 VKKGSINTKDELKSLVNREIRMASARNHSATHLLHKALKETLGEHVNQAGSLVTPERLRF 598

Query: 107 DFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEI 161
           D    +P S +EL  +E+K+ ++I +      + +   +A+E     LF    E Y  E 
Sbjct: 599 DITHFEPISKEELDIVERKVNDVILQSLDIDCEVMGINEAKEKGAMALF---GEKYGNE- 654

Query: 162 LESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKFFKLMKVAG 205
                    V +   G++  +LC G H+ +T QV   FK++   G
Sbjct: 655 ---------VRVVSMGDYSIELCGGTHLNNTSQV-GLFKILSEGG 689


>gi|168700524|ref|ZP_02732801.1| alanyl-tRNA synthetase [Gemmata obscuriglobus UQM 2246]
          Length = 425

 Score = 37.7 bits (86), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 34/146 (23%), Positives = 67/146 (45%), Gaps = 12/146 (8%)

Query: 68  RSLAVIR-HSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFSSDELAQIEKK 125
           R + V+R H+  H++  A++ +        G ++ E+   +DF  ++P +++EL +IE++
Sbjct: 91  RRIDVMRNHTATHLLNLALREVLGHHVEQKGSLVDEEKTRFDFSHDKPVTAEELREIERR 150

Query: 126 MQEIIARDSPFLKQYLSHEKA------RELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           +   +  D     Q +   +A      R +F  K       ++    A E VT   Q   
Sbjct: 151 VNRQVVLDQVVTAQTMPLAQAKGLPGVRAVFGEKYPDPVRVVMIGAEAPEKVT---QDMS 207

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAG 205
            + C G H+  TG +  +FK++   G
Sbjct: 208 VEFCGGTHLPRTGTI-GYFKIVSQEG 232


>gi|91204886|ref|YP_537241.1| alanyl-tRNA synthetase [Rickettsia bellii RML369-C]
 gi|122426110|sp|Q1RKG2|SYA_RICBR RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|91068430|gb|ABE04152.1| Alanyl-tRNA synthetase [Rickettsia bellii RML369-C]
          Length = 877

 Score = 37.7 bits (86), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 69/157 (43%), Gaps = 20/157 (12%)

Query: 45  GKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGF 104
           GKV  ++D     SI++   ++ R    I HS  H++   +  I  +     G ++   +
Sbjct: 543 GKV--ITDENANFSIDVKYRQNLR----IHHSATHLLHAVLHQILGKHVTQKGSLVATSY 596

Query: 105 Y-YDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE 163
             +D    +  + +E+  IE K+ EII RD+        HE    L  S ++A K   + 
Sbjct: 597 LRFDISHPKALTPEEIVLIEDKVNEII-RDN--------HEVDTTLM-STEDAVKQGAMA 646

Query: 164 SIPAK--ENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
               K    V + + GE   +LC G HVR TG +  F
Sbjct: 647 LFGEKYDSEVRVVKMGETSLELCGGTHVRHTGDIGCF 683


>gi|160891225|ref|ZP_02072228.1| hypothetical protein BACUNI_03673 [Bacteroides uniformis ATCC 8492]
 gi|317481112|ref|ZP_07940189.1| tRNA synthetase class II [Bacteroides sp. 4_1_36]
 gi|156859446|gb|EDO52877.1| hypothetical protein BACUNI_03673 [Bacteroides uniformis ATCC 8492]
 gi|316902713|gb|EFV24590.1| tRNA synthetase class II [Bacteroides sp. 4_1_36]
          Length = 872

 Score = 37.7 bits (86), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 32/132 (24%), Positives = 59/132 (44%), Gaps = 12/132 (9%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEK 124
           D R+     HS  H++  A++ +  E     G ++  D   +DF   Q  + +E+ ++E 
Sbjct: 554 DKRAACAANHSATHLLDAALREVLGEHVEQKGSLVTPDSLRFDFSHFQKVTDEEIRKVEH 613

Query: 125 KMQEIIARDSPFLKQY--LSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
            +   I  + P LK+Y  +  E+A+EL            L      ++V + + G   + 
Sbjct: 614 IVNAKIRANIP-LKEYRNIPIEEAKEL--------GAIALFGEKYGDHVRVIQFGSSVEF 664

Query: 183 CRGPHVRSTGQV 194
           C G HV +TG +
Sbjct: 665 CGGTHVAATGNI 676


>gi|291045073|ref|ZP_06570781.1| alanyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
 gi|291011076|gb|EFE03073.1| alanyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
          Length = 881

 Score = 37.7 bits (86), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 36/178 (20%), Positives = 76/178 (42%), Gaps = 18/178 (10%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWP-EVQVAIGPIIEDGFYYDFDKEQPFSS 116
           S+     ++ R+  +  HS  H+M +A++ +    V+     +  +   +D    Q  ++
Sbjct: 552 SVTAKVDDEIRNANMRNHSATHLMHKALRDVLGGHVEQKGSLVTAESTRFDISHPQAVTA 611

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARE----LFESKKEAYKVEILESIPAKENVT 172
           +E+A++E+++ E I  +       +S E A++    +   +K   +V +L+         
Sbjct: 612 EEIAEVERRVNEAILANVAVNAAIMSMEDAQKTDAMMLFGEKYGDEVRVLQ--------- 662

Query: 173 LYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQE 230
               G   +LC G HV  TG +   FK++   G    G      ++ +    W  +QE
Sbjct: 663 --MGGFSTELCGGTHVSRTGDI-GLFKIIS-EGGIAAGVRRIEAITGLNALKWAQEQE 716


>gi|268595847|ref|ZP_06130014.1| alanyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|268549635|gb|EEZ44654.1| alanyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
          Length = 881

 Score = 37.7 bits (86), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 36/178 (20%), Positives = 76/178 (42%), Gaps = 18/178 (10%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWP-EVQVAIGPIIEDGFYYDFDKEQPFSS 116
           SI     ++ R+  +  HS  H+M +A++ +    V+     +  +   +D    Q  ++
Sbjct: 552 SITAKVDDEIRNANMRNHSATHLMHKALRDVLGGHVEQKGSLVTAESTRFDISHPQAVTA 611

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARE----LFESKKEAYKVEILESIPAKENVT 172
           +E+A++E+++ E +  +       +S E A++    +   +K   +V +L+         
Sbjct: 612 EEIAEVERRVNEAVLANVAVNAAIMSMEDAQKTDAMMLFGEKYGDEVRVLQ--------- 662

Query: 173 LYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQE 230
               G   +LC G HV  TG +   FK++   G    G      ++ +    W  +QE
Sbjct: 663 --MGGFSTELCGGTHVSRTGDI-GLFKIIS-EGGIAAGVRRIEAITGLNALKWAQEQE 716


>gi|225560003|gb|EEH08285.1| prolyl-tRNA synthetase [Ajellomyces capsulatus G186AR]
          Length = 555

 Score = 37.7 bits (86), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 4/82 (4%)

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
           F L P +     ++    + SY++LP+R+ +    YR+EP     GL+R R F   D + 
Sbjct: 62  FLLAPTHEEEITSLVAGVMNSYKDLPLRVYQISRKYRDEPRPR-QGLLRGREFIMKDLYT 120

Query: 394 FCTKEQMFNECLKIHNLIISIY 415
           F    +M    +K +N +   Y
Sbjct: 121 FDYNAEM---AIKTYNAVKDTY 139


>gi|268685404|ref|ZP_06152266.1| alanyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
 gi|268625688|gb|EEZ58088.1| alanyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
          Length = 874

 Score = 37.7 bits (86), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 32/153 (20%), Positives = 68/153 (44%), Gaps = 17/153 (11%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWP-EVQVAIGPIIEDGFYYDFDKEQPFSS 116
           S+     ++ R+  +  HS  H+M +A++ +    V+     +  +   +D    Q  ++
Sbjct: 545 SVTAKVDDEIRNANMRNHSATHLMHKALRDVLGGHVEQKGSLVTAESTRFDISHPQAVTA 604

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARE----LFESKKEAYKVEILESIPAKENVT 172
           +E+A++E+++ E I  +       +S E A++    +   +K   +V +L+         
Sbjct: 605 EEIAEVERRVNEAILANVAVNAAIMSMEDAQKTDAMMLFGEKYGDEVRVLQ--------- 655

Query: 173 LYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAG 205
               G   +LC G HV  TG +   FK++   G
Sbjct: 656 --MGGFSTELCGGTHVSRTGDI-GLFKIISEGG 685


>gi|240117118|ref|ZP_04731180.1| alanyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
 gi|268602805|ref|ZP_06136972.1| alanyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
 gi|268586936|gb|EEZ51612.1| alanyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
          Length = 874

 Score = 37.7 bits (86), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 32/153 (20%), Positives = 68/153 (44%), Gaps = 17/153 (11%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWP-EVQVAIGPIIEDGFYYDFDKEQPFSS 116
           SI     ++ R+  +  HS  H+M +A++ +    V+     +  +   +D    Q  ++
Sbjct: 545 SITAKVDDEIRNANMRNHSATHLMHKALRDVLGGHVEQKGSLVTAESTRFDISHPQAVTA 604

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARE----LFESKKEAYKVEILESIPAKENVT 172
           +E+A++E+++ E +  +       +S E A++    +   +K   +V +L+         
Sbjct: 605 EEIAEVERRVNEAVLANVAVNAAIMSMEDAQKTDAMMLFGEKYGDEVRVLQ--------- 655

Query: 173 LYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAG 205
               G   +LC G HV  TG +   FK++   G
Sbjct: 656 --MGGFSTELCGGTHVSRTGDI-GLFKIISEGG 685


>gi|206896025|ref|YP_002246808.1| alanyl-tRNA synthetase [Coprothermobacter proteolyticus DSM 5265]
 gi|206738642|gb|ACI17720.1| alanyl-tRNA synthetase [Coprothermobacter proteolyticus DSM 5265]
          Length = 876

 Score = 37.7 bits (86), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 35/152 (23%), Positives = 67/152 (44%), Gaps = 15/152 (9%)

Query: 51  SDPVREGSIEIITPEDPRSLAVIR-HSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDF 108
           S  ++EG    +  +  R  A+ R H+  H++  A++ +  + V+     +  D F +DF
Sbjct: 537 SGVIKEGQQAFLQVDIERRKAMQRAHTATHLLHAALRRVLGDHVRQGGSKVGPDWFRFDF 596

Query: 109 DKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK 168
              +  S  ++ ++E+ + E          Q L +++    F S  EA K+  +     K
Sbjct: 597 SHFESMSPAQIQEVERLVNE----------QVLENKEVNIFFTSLDEAKKMGAMALFGEK 646

Query: 169 --ENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
             E V +    +W  +LC G H + TG +  F
Sbjct: 647 YGETVRVVEVPDWSMELCGGTHAKRTGDIGLF 678


>gi|260441692|ref|ZP_05795508.1| alanyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
          Length = 874

 Score = 37.4 bits (85), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 32/153 (20%), Positives = 68/153 (44%), Gaps = 17/153 (11%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWP-EVQVAIGPIIEDGFYYDFDKEQPFSS 116
           S+     ++ R+  +  HS  H+M +A++ +    V+     +  +   +D    Q  ++
Sbjct: 545 SVTAKVDDEIRNANMRNHSATHLMHKALRDVLGGHVEQKGSLVTAESTRFDISHPQAVTA 604

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARE----LFESKKEAYKVEILESIPAKENVT 172
           +E+A++E+++ E I  +       +S E A++    +   +K   +V +L+         
Sbjct: 605 EEIAEVERRVNEAILANVAVNAAIMSMEDAQKTDAMMLFGEKYGDEVRVLQ--------- 655

Query: 173 LYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAG 205
               G   +LC G HV  TG +   FK++   G
Sbjct: 656 --MGGFSTELCGGTHVSRTGDI-GLFKIISEGG 685


>gi|240079700|ref|ZP_04724243.1| alanyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
          Length = 874

 Score = 37.4 bits (85), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 32/153 (20%), Positives = 68/153 (44%), Gaps = 17/153 (11%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWP-EVQVAIGPIIEDGFYYDFDKEQPFSS 116
           SI     ++ R+  +  HS  H+M +A++ +    V+     +  +   +D    Q  ++
Sbjct: 545 SITAKVDDEIRNANMRNHSATHLMHKALRDVLGGHVEQKGSLVTAESTRFDISHPQAVTA 604

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARE----LFESKKEAYKVEILESIPAKENVT 172
           +E+A++E+++ E +  +       +S E A++    +   +K   +V +L+         
Sbjct: 605 EEIAEVERRVNEAVLANVAVNAAIMSMEDAQKTDAMMLFGEKYGDEVRVLQ--------- 655

Query: 173 LYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAG 205
               G   +LC G HV  TG +   FK++   G
Sbjct: 656 --MGGFSTELCGGTHVSRTGDI-GLFKIISEGG 685


>gi|161870450|ref|YP_001599622.1| alanyl-tRNA synthetase [Neisseria meningitidis 053442]
 gi|161596003|gb|ABX73663.1| alanyl-tRNA synthetase [Neisseria meningitidis 053442]
          Length = 885

 Score = 37.4 bits (85), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 35/178 (19%), Positives = 76/178 (42%), Gaps = 18/178 (10%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWP-EVQVAIGPIIEDGFYYDFDKEQPFSS 116
           S+     ++ R+  +  HS  H+M +A++ +    V+     +  +   +D    Q  ++
Sbjct: 556 SVTAKVDDEIRNANMRNHSATHLMHKALRDVLGGHVEQKGSLVTAESTRFDISHPQAVTA 615

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARE----LFESKKEAYKVEILESIPAKENVT 172
           +E+A++E+++ E +  +       +S E A++    +   +K   +V +L+         
Sbjct: 616 EEIAEVERRVNEAVLANVAVNAAIMSMEDAQKTGAMMLFGEKYGEEVRVLQ--------- 666

Query: 173 LYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQE 230
               G   +LC G HV  TG +   FK++   G    G      ++ +    W  +QE
Sbjct: 667 --MGGFSTELCGGTHVSRTGDI-GLFKIIS-EGGIAAGVRRIEAITGLNALKWAQEQE 720


>gi|163785957|ref|ZP_02180405.1| GTP diphosphokinase (guanosine 3',5'-polyphosphate synthase)
           [Flavobacteriales bacterium ALC-1]
 gi|159877817|gb|EDP71873.1| GTP diphosphokinase (guanosine 3',5'-polyphosphate synthase)
           [Flavobacteriales bacterium ALC-1]
          Length = 735

 Score = 37.4 bits (85), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 1/60 (1%)

Query: 10  PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPEDPR 68
           P G +K+ P  AT  D A SI   +  K     +NGK+  LS  ++ G  +EI+T E+ +
Sbjct: 410 PKGDLKSLPKGATPLDFAFSIHTEVGMKTRGAKVNGKLMPLSHELQSGDRVEILTSENAK 469


>gi|240276126|gb|EER39638.1| prolyl-tRNA synthetase [Ajellomyces capsulatus H143]
 gi|325090008|gb|EGC43318.1| prolyl-tRNA synthetase [Ajellomyces capsulatus H88]
          Length = 555

 Score = 37.4 bits (85), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 4/82 (4%)

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
           F L P +     ++    + SY++LP+R+ +    YR+EP     GL+R R F   D + 
Sbjct: 62  FLLAPTHEEEITSLVAGVMNSYKDLPLRVYQISRKYRDEPR-PRQGLLRGREFIMKDLYT 120

Query: 394 FCTKEQMFNECLKIHNLIISIY 415
           F    +M    +K +N +   Y
Sbjct: 121 FDYNAEM---AIKTYNAVKDTY 139


>gi|319410810|emb|CBY91198.1| alanyl-tRNA synthetase [Neisseria meningitidis WUE 2594]
          Length = 885

 Score = 37.4 bits (85), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 35/178 (19%), Positives = 76/178 (42%), Gaps = 18/178 (10%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWP-EVQVAIGPIIEDGFYYDFDKEQPFSS 116
           S+     ++ R+  +  HS  H+M +A++ +    V+     +  +   +D    Q  ++
Sbjct: 556 SVTAKVDDEIRNANMRNHSATHLMHKALRDVLGGHVEQKGSLVTAESTRFDISHPQAVTA 615

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARE----LFESKKEAYKVEILESIPAKENVT 172
           +E+A++E+++ E +  +       +S E A++    +   +K   +V +L+         
Sbjct: 616 EEIAEVERRVNEAVLANVAVNAAIMSMEDAQKTGAMMLFGEKYGEEVRVLQ--------- 666

Query: 173 LYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQE 230
               G   +LC G HV  TG +   FK++   G    G      ++ +    W  +QE
Sbjct: 667 --MGGFSTELCGGTHVSRTGDI-GLFKIIS-EGGIAAGVRRIEAITGLNALKWAQEQE 720


>gi|38233953|ref|NP_939720.1| GTP pyrophosphokinase [Corynebacterium diphtheriae NCTC 13129]
 gi|38200214|emb|CAE49898.1| GTP pyrophosphokinase [Corynebacterium diphtheriae]
          Length = 759

 Score = 37.4 bits (85), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 1/58 (1%)

Query: 10  PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPED 66
           P G + N PV +T  D A ++   +  + +   INGK+  L   ++ G  +EI T +D
Sbjct: 425 PKGDVVNLPVDSTPVDFAYAVHTEVGHRCIGAKINGKLVALESKLKSGDRVEIFTSKD 482


>gi|254805364|ref|YP_003083585.1| Alanyl-tRNA synthetase [Neisseria meningitidis alpha14]
 gi|254668906|emb|CBA07085.1| Alanyl-tRNA synthetase [Neisseria meningitidis alpha14]
          Length = 885

 Score = 37.4 bits (85), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 35/178 (19%), Positives = 76/178 (42%), Gaps = 18/178 (10%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWP-EVQVAIGPIIEDGFYYDFDKEQPFSS 116
           S+     ++ R+  +  HS  H+M +A++ +    V+     +  +   +D    Q  ++
Sbjct: 556 SVTAKVDDEIRNANMRNHSATHLMHKALRDVLGGHVEQKGSLVTAESTRFDISHPQAVTA 615

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARE----LFESKKEAYKVEILESIPAKENVT 172
           +E+A++E+++ E +  +       +S E A++    +   +K   +V +L+         
Sbjct: 616 EEIAEVERRVNEAVLANVAVNAAIMSMEDAQKTGAMMLFGEKYGEEVRVLQ--------- 666

Query: 173 LYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQE 230
               G   +LC G HV  TG +   FK++   G    G      ++ +    W  +QE
Sbjct: 667 --MGGFSTELCGGTHVSRTGDI-GLFKIIS-EGGIAAGVRRIEAITGLNALKWAQEQE 720


>gi|13123512|gb|AAK12856.1| mitochondrial ribosomal protein-L5 heart-specific splice-variant
           [Homo sapiens]
          Length = 204

 Score = 37.4 bits (85), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 19/113 (16%)

Query: 90  PEVQVAIGPIIEDGFYYD------FDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSH 143
           PEV     P+I   F YD       D+  P + + L    K    +I +D PF    +  
Sbjct: 21  PEV-----PVISGAFCYDVVLDSKLDEWMP-TKENLRSFTKDAHALIYKDLPFETLEVEA 74

Query: 144 EKARELFESKKEAYKVEILESIPAKEN----VTLYRQGEWFDLCRGPHVRSTG 192
           + A E+F+  K  YKV+ +E   A +N    V L+R G++ D+  GP +  T 
Sbjct: 75  KVALEIFQHSK--YKVDFIEE-KASQNPERIVKLHRIGDFIDVSEGPLIPRTS 124


>gi|209736970|gb|ACI69354.1| Mitochondrial 39S ribosomal protein L39 [Salmo salar]
          Length = 343

 Score = 37.4 bits (85), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 86/205 (41%), Gaps = 22/205 (10%)

Query: 43  INGKVCDLSDPVREG-SIEIITPEDPRSLAVIR---HSCAHIMAEAVQSIW--------- 89
           ++GK   L  P+ +  S+ ++T +D     V +    SCA ++ + +Q  +         
Sbjct: 96  VDGKPWPLHQPLTQSCSLSLLTFKDSDPQMVNQAYWRSCAALLGQVLQDAFKEDFSVELL 155

Query: 90  --PEVQVAIGPIIEDGFY-YDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKA 146
             PEV V  G    D       D   P S + L  + +  Q++I RD P+    ++   A
Sbjct: 156 RVPEVLVTSGAFCCDVVLDPQLDAWNP-SEESLRSLTRGAQQLIHRDLPWEPLEVAPPVA 214

Query: 147 RELFE-SKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAG 205
            E F  S+ +  +VE   +   K  V LYR G+   L  GP V  TG   ++    +V  
Sbjct: 215 LEAFSHSRCKQEEVEEKSAQSPKGTVMLYRCGDHVLLSGGPLVARTGLCSQY----EVTA 270

Query: 206 AYWRGDSNRPMLSRIYGTAWNTQQE 230
            +  G+    +  R  G +   QQ+
Sbjct: 271 IHPLGEGEWGLHRRAQGLSLPLQQQ 295


>gi|163756793|ref|ZP_02163902.1| GTP diphosphokinase (guanosine 3',5'-polyphosphate synthase)
           [Kordia algicida OT-1]
 gi|161323182|gb|EDP94522.1| GTP diphosphokinase (guanosine 3',5'-polyphosphate synthase)
           [Kordia algicida OT-1]
          Length = 737

 Score = 37.4 bits (85), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 1/60 (1%)

Query: 10  PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPR 68
           PDG +K+ P  AT  D A SI   +        +NGK+  LS  ++ G  +EIIT +  +
Sbjct: 410 PDGDLKSLPKGATPLDFAFSIHTQVGYHTRGAKVNGKLVPLSHELKSGDQVEIITSDKSK 469


>gi|72080721|ref|YP_287779.1| prolyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448]
 gi|114152215|sp|Q4A7Y3|SYP_MYCH7 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|71913845|gb|AAZ53756.1| prolyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448]
          Length = 479

 Score = 37.4 bits (85), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 34/131 (25%), Positives = 56/131 (42%), Gaps = 11/131 (8%)

Query: 501 NLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG--IMIENFKGNL--PLWLSPIQAI 556
           N    F  FY N  ++   P    +  +G   R IG  +M+ +    L  P  ++PIQ  
Sbjct: 235 NFAKNFEIFYKNKENKSQIPF---QTSWGLSTRLIGAIVMVHSDDNGLIFPPKIAPIQVD 291

Query: 557 VTTITSSAVE----YAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
           +    S   +    +A+ IA +LK+  ++ + D  ++ I YKI    +   PI I  G  
Sbjct: 292 ILEFFSKKNQEVKIFAKRIAKILKNAKIAYKIDDTDQQIGYKINNSEVHGAPIRIEIGPN 351

Query: 613 EASERSIGIRR 623
           E     I + R
Sbjct: 352 EVKNNQICLVR 362


>gi|330752589|emb|CBL87535.1| alanyl-tRNA synthetase [uncultured Flavobacteria bacterium]
          Length = 873

 Score = 37.4 bits (85), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 42/182 (23%), Positives = 77/182 (42%), Gaps = 39/182 (21%)

Query: 44  NGKVCDLSDPVREGSIEI-----------------ITPEDPRSLAVIRHSCAHIMAEAVQ 86
           NG++ +++D  +E ++ I                 + PE  R      H+  H++ +A++
Sbjct: 515 NGEILNITDTKKENNLVIHHCKSLPKKMDISFKVFVNPE-LRLNTSSNHTATHLVHQALR 573

Query: 87  SIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQY-LSHE 144
            +    VQ     +    F +DF       +++L  +EK + E I    P  +Q  + H+
Sbjct: 574 FVLGNHVQQKGSMVNSKMFRFDFSHFSKLKNEQLKNVEKFVNERILEKIPLEEQREIPHD 633

Query: 145 KARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFK 199
           KA E     LF  K               +NV   R G+  +LC G HV++T  +  +FK
Sbjct: 634 KALEEGAIALFGEK-------------YGKNVRTIRFGKSIELCGGTHVKNTSDI-WYFK 679

Query: 200 LM 201
           ++
Sbjct: 680 II 681


>gi|296313800|ref|ZP_06863741.1| alanine--tRNA ligase [Neisseria polysaccharea ATCC 43768]
 gi|296839624|gb|EFH23562.1| alanine--tRNA ligase [Neisseria polysaccharea ATCC 43768]
          Length = 873

 Score = 37.4 bits (85), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 36/178 (20%), Positives = 76/178 (42%), Gaps = 18/178 (10%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWP-EVQVAIGPIIEDGFYYDFDKEQPFSS 116
           S+     ++ R+  +  HS  H+M +A++ +    V+     +  +   +D    Q  ++
Sbjct: 545 SVTAKVDDEIRNANMRNHSATHLMHKALRDVLGGHVEQKGSLVTAESTRFDISHPQAVTA 604

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARE----LFESKKEAYKVEILESIPAKENVT 172
           +E+A++E+++ E I  +       +S E A++    +   +K   +V +L+         
Sbjct: 605 EEIAEVERRVNEAILANVAVNAAIMSMEDAQKTGAMMLFGEKYGDEVRVLQ--------- 655

Query: 173 LYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQE 230
               G   +LC G HV  TG +   FK++   G    G      ++ +    W  +QE
Sbjct: 656 --MGGFSTELCGGTHVSRTGDI-GLFKIIS-EGGIAAGVRRIEAITGLNALKWAQEQE 709


>gi|225075679|ref|ZP_03718878.1| hypothetical protein NEIFLAOT_00695 [Neisseria flavescens
           NRL30031/H210]
 gi|224952950|gb|EEG34159.1| hypothetical protein NEIFLAOT_00695 [Neisseria flavescens
           NRL30031/H210]
          Length = 874

 Score = 37.4 bits (85), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 35/178 (19%), Positives = 76/178 (42%), Gaps = 18/178 (10%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSS 116
           S+     ++ R+  +  HS  H+M +A++ +  E V+     +  +   +D    Q  ++
Sbjct: 545 SVTAKVDDEIRNANMRNHSATHLMHKALRDVLGEHVEQKGSLVTAESTRFDISHPQAVTA 604

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARE----LFESKKEAYKVEILESIPAKENVT 172
           +E+ ++E+++ E +  +       +S E A++    +   +K   +V +L+         
Sbjct: 605 EEITEVERRVNEAVLANVAVNAAIMSMEDAQKTGAMMLFGEKYGDEVRVLQ--------- 655

Query: 173 LYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQE 230
               G   +LC G HV  TG +   FK++   G    G      ++ +    W  +QE
Sbjct: 656 --MGGFSTELCGGTHVSRTGDI-GLFKIIS-EGGIAAGVRRIEAITGLNALKWAQEQE 709


>gi|19552864|ref|NP_600866.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
           [Corynebacterium glutamicum ATCC 13032]
 gi|145295774|ref|YP_001138595.1| hypothetical protein cgR_1699 [Corynebacterium glutamicum R]
 gi|21903460|sp|O87331|RELA_CORGL RecName: Full=GTP pyrophosphokinase; AltName: Full=(p)ppGpp
           synthase; AltName: Full=ATP:GTP
           3'-pyrophosphotransferase; AltName: Full=ppGpp synthase
           I
 gi|21324422|dbj|BAB99046.1| Guanosine polyphosphate pyrophosphohydrolases/synthetases
           [Corynebacterium glutamicum ATCC 13032]
 gi|140845694|dbj|BAF54693.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 760

 Score = 37.4 bits (85), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 1/58 (1%)

Query: 10  PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPED 66
           P G + N PV++T  D A ++   +  + +   INGK+  L   ++ G  +E+ T +D
Sbjct: 425 PKGDVVNLPVNSTPVDFAYAVHTEVGHRCIGAKINGKLVALETKLKSGDRVEVFTSKD 482


>gi|262277414|ref|ZP_06055207.1| alanyl-tRNA synthetase [alpha proteobacterium HIMB114]
 gi|262224517|gb|EEY74976.1| alanyl-tRNA synthetase [alpha proteobacterium HIMB114]
          Length = 892

 Score = 37.4 bits (85), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 33/133 (24%), Positives = 59/133 (44%), Gaps = 21/133 (15%)

Query: 75  HSCAHIMAEAVQSIWPEVQVA-----IGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           HS  H++  A++       VA     +GP   D   +DF   +  +S++  +I  ++   
Sbjct: 565 HSATHLLHAALREELGN-HVAQRGSYVGP---DRLRFDFSYSKQINSEQQKKINSRVNHF 620

Query: 130 IARDSPFLKQYLSHEK-----ARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
           I ++   + + +S EK     A  LF    E Y  E+      K N  ++      +LC 
Sbjct: 621 INKNDKVITRLMSPEKAIKEGAMALF---GEKYGEEVRVVSMGKNNDKIFS----LELCG 673

Query: 185 GPHVRSTGQVKKF 197
           G HV +TG++ +F
Sbjct: 674 GTHVENTGKIGQF 686


>gi|153953239|ref|YP_001394004.1| prolyl-tRNA synthetase [Clostridium kluyveri DSM 555]
 gi|146346120|gb|EDK32656.1| ProS [Clostridium kluyveri DSM 555]
          Length = 476

 Score = 37.4 bits (85), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 60/272 (22%), Positives = 117/272 (43%), Gaps = 44/272 (16%)

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKG-------- 450
           Q + +  K++N   S+ +   +EK     +TRP  R  ++ LW +   I           
Sbjct: 127 QSYKDLPKLYNQWCSVVR---WEK-----TTRPFLRT-TEFLWQEGHTIHATKEEAEEET 177

Query: 451 --VLDTIKNSSQDRINTGVLLGEGA----FYGPKFEYILKDAI--GRDWQCGTIQ-VDFN 501
             +L+  +   ++ +   VL G+      F G +  Y ++  +  G+  Q GT      N
Sbjct: 178 IRMLNIYEELCREMLAIPVLKGQKTESEKFAGGEATYTIESLMHDGKALQSGTSHYFGQN 237

Query: 502 LPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG--IMIENFKGNL--PLWLSPIQAIV 557
               F   Y++ + +  +   +++  +G   R IG  IM+      L  P  ++P+Q I+
Sbjct: 238 FAKPFEMQYLDKNGKLQY---VYQTSWGITTRIIGALIMVHGDDNGLVVPPRIAPLQVII 294

Query: 558 TTITS---SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
             I       +E A E+   L S  + ++ D  ++   +K  EH +K +PI +  G K+ 
Sbjct: 295 VPIAQHKEGVLEKADELKEEL-SKIVRVKIDDSDKMPGWKFSEHEMKGVPIRLEVGPKDI 353

Query: 615 SERSIGIRRFGSTTTQKV-----SLLDAIPIL 641
           ++  + + R    T +K+     +L D +P L
Sbjct: 354 AKNQVVLVR--RDTREKIMVPMSNLCDEVPAL 383


>gi|119630385|gb|EAX09980.1| mitochondrial ribosomal protein L39, isoform CRA_b [Homo sapiens]
          Length = 328

 Score = 37.4 bits (85), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 43/186 (23%), Positives = 84/186 (45%), Gaps = 22/186 (11%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIR---HS 76
           +T    A  +S    +K++   ++G+  D+  P+ +   I+ +T +D     V +    S
Sbjct: 86  STPYSCAMHLSEWYCRKSILALVDGQPWDMYKPLTKSCEIKFLTFKDCDPGEVNKAYWRS 145

Query: 77  CAHIMAEAVQSIWPE------VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEII 130
           CA +M   ++  + +      V+    P+++       D+  P + + L    K    +I
Sbjct: 146 CAMMMGCVIERAFKDEYMVNLVRAPEVPVLDS----KLDEWMP-TKENLRSFTKDAHALI 200

Query: 131 ARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN----VTLYRQGEWFDLCRGP 186
            +D PF    +  + A E+F+  K  YKV+ +E   A +N    V L+R G++ D+  GP
Sbjct: 201 YKDLPFETLEVEAKVALEIFQHSK--YKVDFIEE-KASQNPERIVKLHRIGDFIDVSEGP 257

Query: 187 HVRSTG 192
            +  T 
Sbjct: 258 LIPRTS 263


>gi|294790797|ref|ZP_06755955.1| alanine--tRNA ligase [Scardovia inopinata F0304]
 gi|294458694|gb|EFG27047.1| alanine--tRNA ligase [Scardovia inopinata F0304]
          Length = 900

 Score = 37.4 bits (85), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 45/200 (22%), Positives = 82/200 (41%), Gaps = 36/200 (18%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQ------ 127
           H+  H++ + V+ +  +     G +++ D   +DF   +  +S +L QIE ++       
Sbjct: 579 HTATHVLHKVVREVLGQKATQSGSVVDPDRLRFDFHWSKALTSSQLHQIESRVNARIRDD 638

Query: 128 -EIIARDSPFLKQYLSHEKARELFESK-KEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
            E+  ++ P + Q LS   A  LF  K  +  +V           VT+   G   +LC G
Sbjct: 639 LEVTWKNMP-INQALSL-GAMHLFGDKYGDVVRV-----------VTIGSDGWSRELCGG 685

Query: 186 PHVRSTGQVKKFFKLMKVA--------------GAYWRGDSNRPMLSRIYGTAWNTQQEL 231
            H   TG +  F  L + +               +Y    S   +++++     +   EL
Sbjct: 686 THAARTGTIGSFTLLSESSVGTGVRRIEALVGDKSYEFNHSQHSLINKLASDLNSRPDEL 745

Query: 232 TQYLYFLEESEKRDHRKLAR 251
            + L  LE+  K   RKLA+
Sbjct: 746 EERLTALEDRLKESDRKLAQ 765


>gi|332535100|ref|ZP_08410911.1| alanyl-tRNA synthetase [Pseudoalteromonas haloplanktis ANT/505]
 gi|332035475|gb|EGI71972.1| alanyl-tRNA synthetase [Pseudoalteromonas haloplanktis ANT/505]
          Length = 866

 Score = 37.4 bits (85), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 37/167 (22%), Positives = 71/167 (42%), Gaps = 23/167 (13%)

Query: 41  VAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII 100
           + +N KV    D  R  SI+              H+  HI+ EA++ +  +     G ++
Sbjct: 533 IGVNDKVDATIDNARRDSIKK------------NHTATHILHEALRQLLGDHVGQKGSLV 580

Query: 101 E-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKV 159
           + D   +DF   +  + DEL +IE+ + + I R+     + ++ + A+        A   
Sbjct: 581 QPDRLRFDFSHFEAVTKDELREIERVVNDEIRRNFALNTELMAIDDAK--------AKGA 632

Query: 160 EILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKFFKLMKVAG 205
             L      + V +   G++  +LC G HV   G +   FK++  +G
Sbjct: 633 MALFGEKYDDEVRVVTIGDYSIELCGGTHVERAGDI-GLFKIVSESG 678


>gi|260174420|ref|ZP_05760832.1| alanyl-tRNA synthetase [Bacteroides sp. D2]
 gi|315922688|ref|ZP_07918928.1| alanyl-tRNA synthetase [Bacteroides sp. D2]
 gi|313696563|gb|EFS33398.1| alanyl-tRNA synthetase [Bacteroides sp. D2]
          Length = 158

 Score = 37.4 bits (85), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 21/86 (24%), Positives = 48/86 (55%), Gaps = 13/86 (15%)

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIP--AKENVT 172
           +++++  IE ++ E+I+++ P   ++++HE+A+++ +          L  +P  A E + 
Sbjct: 59  TAEQIQSIEDRVNEVISQNLPVTVEFMTHEQAKDIVD----------LSKLPADASETLR 108

Query: 173 LYRQGEWFDL-CRGPHVRSTGQVKKF 197
           + R G++    C G HV +T +V  F
Sbjct: 109 IVRIGDYDACACIGLHVSNTSEVDIF 134


>gi|62390535|ref|YP_225937.1| ppGpp synthetase, ppGpp pyrophosphorylase [Corynebacterium
           glutamicum ATCC 13032]
 gi|3599974|gb|AAC35494.1| GTP pyrophosphokinase [Corynebacterium glutamicum]
 gi|41325873|emb|CAF20036.1| PPGPP SYNTHETASE, PPGPP PYROPHOSPHORYLASE [Corynebacterium
           glutamicum ATCC 13032]
          Length = 760

 Score = 37.4 bits (85), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 1/58 (1%)

Query: 10  PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPED 66
           P G + N PV++T  D A ++   +  + +   INGK+  L   ++ G  +E+ T +D
Sbjct: 425 PKGDVVNLPVNSTPVDFAYAVHTEVGHRCIGAKINGKLVALETKLKSGDRVEVFTSKD 482


>gi|15922515|ref|NP_378184.1| threonyl-tRNA synthetase [Sulfolobus tokodaii str. 7]
 gi|15623305|dbj|BAB67293.1| 267aa long hypothetical threonyl-tRNA synthetase [Sulfolobus
           tokodaii str. 7]
          Length = 267

 Score = 37.4 bits (85), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 3/78 (3%)

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
            LP+WLSPIQ  +  +    V+ A EIA+ +      ++ D   + +  KI       IP
Sbjct: 147 TLPIWLSPIQVRILPVKQDFVKSAIEIASKINGR---VDVDDLPDGLGAKIARAGKDWIP 203

Query: 605 IIIICGDKEASERSIGIR 622
            ++I G++E    S+ ++
Sbjct: 204 YVVILGEREIKTLSLTVK 221


>gi|120434599|ref|YP_860290.1| alanyl-tRNA synthetase [Gramella forsetii KT0803]
 gi|205830059|sp|A0LXX3|SYA_GRAFK RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|117576749|emb|CAL65218.1| alanyl-tRNA synthetase [Gramella forsetii KT0803]
          Length = 871

 Score = 37.4 bits (85), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 39/183 (21%), Positives = 81/183 (44%), Gaps = 28/183 (15%)

Query: 34  LAKKAVAVAINGKVCDLSDPVREGS----------------IEIITPEDPRSLAVIRHSC 77
           +  K + ++ +G+V D+ D  +E +                 + I  +  R      H+ 
Sbjct: 506 VGDKGILMSSDGEVVDVVDTKKENNQIIHFTKNLPKNTEAEFKAIVNKTERYNTASNHTA 565

Query: 78  AHIMAEAVQSIWPEVQVAIGPIIEDGFY-YDFDKEQPFSSDELAQIEKKMQEIIARDSPF 136
            H++ +A++SI        G +++ G+  +DF      + +EL ++E  +    AR    
Sbjct: 566 THLLHQALRSILGTHVEQKGSMVQSGYLRFDFSHFSKVTGEELEKVENFVN---AR---- 618

Query: 137 LKQYLSHEKARELFESKKEAYKVEILESIPAK--ENVTLYRQGEWFDLCRGPHVRSTGQV 194
           +++ LS ++ R +  S +EA     +     K  ++V   R G+  +LC G HV++T  +
Sbjct: 619 IREQLSLDEQRNI--SYQEAIDQGAIALFGEKYGDSVRAIRFGDSMELCGGIHVKNTSDI 676

Query: 195 KKF 197
             F
Sbjct: 677 WHF 679


>gi|325136739|gb|EGC59339.1| alanyl-tRNA synthetase [Neisseria meningitidis M0579]
 gi|325201730|gb|ADY97184.1| alanyl-tRNA synthetase [Neisseria meningitidis M01-240149]
 gi|325208526|gb|ADZ03978.1| alanyl-tRNA synthetase [Neisseria meningitidis NZ-05/33]
          Length = 989

 Score = 37.4 bits (85), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 31/153 (20%), Positives = 68/153 (44%), Gaps = 17/153 (11%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWP-EVQVAIGPIIEDGFYYDFDKEQPFSS 116
           S+     ++ R+  +  HS  H+M +A++ +    V+     +  +   +D    Q  ++
Sbjct: 660 SVTAKVDDEIRNANMRNHSATHLMHKALRDVLGGHVEQKGSLVTAESTRFDISHPQAVTA 719

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARE----LFESKKEAYKVEILESIPAKENVT 172
           +E+A++E+++ E +  +       +S E A++    +   +K   +V +L+         
Sbjct: 720 EEIAEVERRVNEAVLANVAVNAAIMSMEDAQKTGAMMLFGEKYGEEVRVLQ--------- 770

Query: 173 LYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAG 205
               G   +LC G HV  TG +   FK++   G
Sbjct: 771 --MGGFSTELCGGTHVSRTGDI-GLFKIISEGG 800


>gi|256752916|ref|ZP_05493749.1| alanyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
 gi|256748196|gb|EEU61267.1| alanyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
          Length = 757

 Score = 37.4 bits (85), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 62/133 (46%), Gaps = 12/133 (9%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKM 126
           R  A   H+  H++ +A++ I  + V  A   + +D   +DF   Q  + +EL QIE ++
Sbjct: 556 RRNAARNHTATHLLHKALKEILGDHVHQAGSLVADDRLRFDFSHYQAVTKEELKQIENRV 615

Query: 127 QEIIARDSPFLKQYLS-HEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCR 184
            E I        Q L+ H + +   E+ KE       E    K  V + +  ++  +LC 
Sbjct: 616 NEKIY-------QSLNVHIEEKTYDEAVKEGAVALFTEKYGDK--VRVVKIDDYSMELCG 666

Query: 185 GPHVRSTGQVKKF 197
           G HV++T ++  F
Sbjct: 667 GTHVKNTNEIGIF 679


>gi|91773034|ref|YP_565726.1| Ala-tRNA(Pro) hydrolase [Methanococcoides burtonii DSM 6242]
 gi|91712049|gb|ABE51976.1| Threonyl/alanyl tRNA synthetase second additional domain
           [Methanococcoides burtonii DSM 6242]
          Length = 234

 Score = 37.4 bits (85), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 16/159 (10%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D RSL +  H+ AHI++  + S     +++   I E+    DF+ E  F  + +   E K
Sbjct: 89  DRRSLFMKYHTAAHILSAMIHS-ETGAKISGNQIAEEKTRVDFNLED-FDRELIGSYEAK 146

Query: 126 MQEIIARDSPFLKQYLSHEKAREL--FESKKEAYKVEILESIPAKENVTLYRQGEWFD-L 182
           + EII R      + L  ++A ++      K+A+  EI       E + + R  +  D  
Sbjct: 147 VNEIIDRKIDVEIEILPRDEALKIPSVVKLKDAFPPEI-------EEIRVIRIPDVDDQA 199

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIY 221
           C G HV +TG++      +++  A  +G +NR +  R +
Sbjct: 200 CGGTHVANTGEIPH----IEIFKAENKGKNNRRIYFRFF 234


>gi|302386453|ref|YP_003822275.1| alanyl-tRNA synthetase [Clostridium saccharolyticum WM1]
 gi|302197081|gb|ADL04652.1| alanyl-tRNA synthetase [Clostridium saccharolyticum WM1]
          Length = 879

 Score = 37.4 bits (85), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 28/130 (21%), Positives = 57/130 (43%), Gaps = 20/130 (15%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++ +A++++        G  ++ D   +DF      + +E+ Q+E  + E I   
Sbjct: 566 HSATHLLQKALRTVLGSHVEQAGSFVDGDKLRFDFTHFSAMTPEEIRQVETLVNEKIKES 625

Query: 134 SPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPH 187
            P   + ++ E A++     LF  K               + V + + G++  +LC G H
Sbjct: 626 LPVKTEIMTLEDAKKSGAMALFGEK-------------YGDTVRVVKMGDFSTELCGGTH 672

Query: 188 VRSTGQVKKF 197
           + +TG +  F
Sbjct: 673 INNTGVIGSF 682


>gi|205830264|sp|A9M198|SYA_NEIM0 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
          Length = 874

 Score = 37.4 bits (85), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 35/178 (19%), Positives = 76/178 (42%), Gaps = 18/178 (10%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWP-EVQVAIGPIIEDGFYYDFDKEQPFSS 116
           S+     ++ R+  +  HS  H+M +A++ +    V+     +  +   +D    Q  ++
Sbjct: 545 SVTAKVDDEIRNANMRNHSATHLMHKALRDVLGGHVEQKGSLVTAESTRFDISHPQAVTA 604

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARE----LFESKKEAYKVEILESIPAKENVT 172
           +E+A++E+++ E +  +       +S E A++    +   +K   +V +L+         
Sbjct: 605 EEIAEVERRVNEAVLANVAVNAAIMSMEDAQKTGAMMLFGEKYGEEVRVLQ--------- 655

Query: 173 LYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQE 230
               G   +LC G HV  TG +   FK++   G    G      ++ +    W  +QE
Sbjct: 656 --MGGFSTELCGGTHVSRTGDI-GLFKIIS-EGGIAAGVRRIEAITGLNALKWAQEQE 709


>gi|86133427|ref|ZP_01052009.1| GTP pyrophosphokinase, RelA/SpoT family [Polaribacter sp. MED152]
 gi|85820290|gb|EAQ41437.1| GTP pyrophosphokinase, RelA/SpoT family [Polaribacter sp. MED152]
          Length = 740

 Score = 37.4 bits (85), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 1/55 (1%)

Query: 10  PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           P G +K+ P  A+  D A SI   +  K     +NGK+  LS  +R G  IE+IT
Sbjct: 410 PKGDLKSLPKDASALDFAFSIHTDIGLKCRGAKVNGKLVPLSYTLRSGDQIEVIT 464


>gi|325132719|gb|EGC55402.1| alanyl-tRNA synthetase [Neisseria meningitidis M6190]
          Length = 881

 Score = 37.4 bits (85), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 35/178 (19%), Positives = 76/178 (42%), Gaps = 18/178 (10%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSS 116
           S+     ++ R+  +  HS  H+M +A++ +    V+     +  +   +D    Q  ++
Sbjct: 552 SVTAKVDDEIRNANMRNHSATHLMHKALRDVLGRHVEQKGSLVTAESTRFDISHPQAVTA 611

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARE----LFESKKEAYKVEILESIPAKENVT 172
           +E+A++E+++ E +  +       +S E A++    +   +K   +V +L+         
Sbjct: 612 EEIAEVERRVNEAVLANVAVNAAIMSMEDAQKTGAMMLFGEKYGDEVRVLQ--------- 662

Query: 173 LYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQE 230
               G   +LC G HV  TG +   FK++   G    G      ++ +    W  +QE
Sbjct: 663 --MGGFSTELCGGTHVSRTGDI-GLFKIIS-EGGIAAGVRRIEAITGLNALKWAQEQE 716


>gi|261379016|ref|ZP_05983589.1| alanine--tRNA ligase [Neisseria cinerea ATCC 14685]
 gi|269144550|gb|EEZ70968.1| alanine--tRNA ligase [Neisseria cinerea ATCC 14685]
          Length = 874

 Score = 37.4 bits (85), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 36/168 (21%), Positives = 72/168 (42%), Gaps = 18/168 (10%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKM 126
           R+  +  HS  H+M +A++ +  E V+     +  +   +D    Q  +++E+A++E ++
Sbjct: 555 RNANMRNHSATHLMHKALRDVLGEHVEQKGSLVTAESTRFDISHPQAVTAEEIAEVECRV 614

Query: 127 QEIIARDSPFLKQYLSHEKARE----LFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
            E I  +       +S E A++    +   +K   +V +L+             G   +L
Sbjct: 615 NEAILANVAVNAAIMSMEDAQKTGAMMLFGEKYGDEVRVLQ-----------MGGFSTEL 663

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQE 230
           C G HV  TG +   FK++   G    G      ++ +    W  +QE
Sbjct: 664 CGGTHVSRTGDI-GLFKIIS-EGGIAAGVRRIEAITGLNALKWAQEQE 709


>gi|218768564|ref|YP_002343076.1| alanyl-tRNA synthetase [Neisseria meningitidis Z2491]
 gi|20532265|sp|Q9JTG4|SYA_NEIMA RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|121052572|emb|CAM08912.1| alanyl-tRNA synthetase [Neisseria meningitidis Z2491]
          Length = 874

 Score = 37.4 bits (85), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 35/178 (19%), Positives = 76/178 (42%), Gaps = 18/178 (10%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWP-EVQVAIGPIIEDGFYYDFDKEQPFSS 116
           S+     ++ R+  +  HS  H+M +A++ +    V+     +  +   +D    Q  ++
Sbjct: 545 SVTAKVDDEIRNANMRNHSATHLMHKALRDVLGGHVEQKGSLVTAESTRFDISHPQAVTA 604

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARE----LFESKKEAYKVEILESIPAKENVT 172
           +E+A++E+++ E +  +       +S E A++    +   +K   +V +L+         
Sbjct: 605 EEIAEVERRVNEAVLANVAVNAAIMSMEDAQKTGAMMLFGEKYGEEVRVLQ--------- 655

Query: 173 LYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQE 230
               G   +LC G HV  TG +   FK++   G    G      ++ +    W  +QE
Sbjct: 656 --MGGFSTELCGGTHVSRTGDI-GLFKIIS-EGGIAAGVRRIEAITGLNALKWAQEQE 709


>gi|167037465|ref|YP_001665043.1| alanyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|167040127|ref|YP_001663112.1| alanyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|300914211|ref|ZP_07131527.1| alanyl-tRNA synthetase [Thermoanaerobacter sp. X561]
 gi|307724554|ref|YP_003904305.1| alanyl-tRNA synthetase [Thermoanaerobacter sp. X513]
 gi|320115879|ref|YP_004186038.1| alanyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
 gi|205830277|sp|B0K994|SYA_THEP3 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|205830278|sp|B0K0Q1|SYA_THEPX RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|166854367|gb|ABY92776.1| alanyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|166856299|gb|ABY94707.1| alanyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|300889146|gb|EFK84292.1| alanyl-tRNA synthetase [Thermoanaerobacter sp. X561]
 gi|307581615|gb|ADN55014.1| alanyl-tRNA synthetase [Thermoanaerobacter sp. X513]
 gi|319928970|gb|ADV79655.1| alanyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
          Length = 877

 Score = 37.4 bits (85), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 62/133 (46%), Gaps = 12/133 (9%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKM 126
           R  A   H+  H++ +A++ I  + V  A   + +D   +DF   Q  + +EL QIE ++
Sbjct: 556 RRNAARNHTATHLLHKALKEILGDHVHQAGSLVADDRLRFDFSHYQAVTKEELKQIENRV 615

Query: 127 QEIIARDSPFLKQYLS-HEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCR 184
            E I        Q L+ H + +   E+ KE       E    K  V + +  ++  +LC 
Sbjct: 616 NEKIY-------QSLNVHIEEKTYDEAVKEGAVALFTEKYGDK--VRVVKIDDYSMELCG 666

Query: 185 GPHVRSTGQVKKF 197
           G HV++T ++  F
Sbjct: 667 GTHVKNTNEIGIF 679


>gi|118580813|ref|YP_902063.1| (p)ppGpp synthetase I SpoT/RelA [Pelobacter propionicus DSM 2379]
 gi|118503523|gb|ABL00006.1| (p)ppGpp synthetase I, SpoT/RelA [Pelobacter propionicus DSM 2379]
          Length = 717

 Score = 37.4 bits (85), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 1/63 (1%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI-E 60
           P ++ +  P G +K FP  +T  D A ++   +  + V   +NGK+  L   ++ G I E
Sbjct: 384 PEEVYVFTPQGDVKPFPRGSTPIDFAYAVHSDVGHRCVGAKVNGKLVPLKYELKNGDIVE 443

Query: 61  IIT 63
           +IT
Sbjct: 444 VIT 446


>gi|313668028|ref|YP_004048312.1| alanyl-tRNA synthetase [Neisseria lactamica ST-640]
 gi|313005490|emb|CBN86926.1| alanyl-tRNA synthetase [Neisseria lactamica 020-06]
          Length = 874

 Score = 37.4 bits (85), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 31/153 (20%), Positives = 68/153 (44%), Gaps = 17/153 (11%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSS 116
           S+     ++ R+  +  HS  H+M +A++ +  E V+     +  +   +D    Q  ++
Sbjct: 545 SVTAKVDDEIRNANMRNHSATHLMHKALRDVLGEHVEQKGSLVTAESTRFDISHPQAVTA 604

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARE----LFESKKEAYKVEILESIPAKENVT 172
           +E+ ++E+++ E +  +       +S E A++    +   +K   +V +L+         
Sbjct: 605 EEITEVERRVNEAVLANVAVNAAIMSMEDAQKTGAMMLFGEKYGDEVRVLQ--------- 655

Query: 173 LYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAG 205
               G   +LC G HV  TG +   FK++   G
Sbjct: 656 --MGGFSTELCGGTHVSRTGDI-GLFKIISEGG 685


>gi|294672801|ref|YP_003573417.1| alanine--tRNA ligase [Prevotella ruminicola 23]
 gi|294472795|gb|ADE82184.1| alanine--tRNA ligase [Prevotella ruminicola 23]
          Length = 887

 Score = 37.4 bits (85), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 46/202 (22%), Positives = 83/202 (41%), Gaps = 26/202 (12%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEK 124
           D R+ +   H+  H++  A++ I  +     G  +  D   +DF   +  + ++L ++E+
Sbjct: 567 DKRNASAANHTATHLLDYALKQILGDHVEQKGSFVSPDTLRFDFSHFEKVTDEQLREVER 626

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
            + ++I +D      ++   +     E+KK        E    K  V + R G   + C 
Sbjct: 627 MVNDMIRQDI-----HIDEHRDVPFDEAKKLGAIALFGEKYGDK--VRVVRFGPSCEFCG 679

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           G H  STG++  FFK++          S   + + I      T QE  + LY  E+    
Sbjct: 680 GIHASSTGRI-GFFKII----------SESSVAAGIRRIEAKTGQECEELLYQTEDI--- 725

Query: 245 DHRKLAREMDLFHIAEDGSGVI 266
               L      F+ A+D  GVI
Sbjct: 726 ----LKAVKAFFNNAKDLQGVI 743


>gi|253578839|ref|ZP_04856110.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251849782|gb|EES77741.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 879

 Score = 37.4 bits (85), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 35/150 (23%), Positives = 65/150 (43%), Gaps = 11/150 (7%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSS 116
           ++ +   E  R      HS  H++ +A++++        G ++  D   +DF   Q  ++
Sbjct: 549 TVSLKVDEAARRDTEKNHSATHLLQKALKTVLGNHVEQKGSLVTPDRLRFDFAHFQAMTA 608

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
           DE+AQ+E  + + I          +  E      E+KK        E    K  V +   
Sbjct: 609 DEIAQVEALVNKEIQAGLEVRTDVMDVE------EAKKSGAMALFGEKYDQK--VRVVSM 660

Query: 177 GEWF-DLCRGPHVRSTGQVKKFFKLMKVAG 205
           G++  +LC G HV +TG +   FK++  +G
Sbjct: 661 GDFSKELCGGTHVANTGNI-MLFKIVSESG 689


>gi|37525217|ref|NP_928561.1| alanyl-tRNA synthetase [Photorhabdus luminescens subsp. laumondii
           TTO1]
 gi|41018167|sp|Q7N7A5|SYA_PHOLL RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|36784644|emb|CAE13544.1| alanyl-tRNA synthetase (alanine--tRNA ligase) [Photorhabdus
           luminescens subsp. laumondii TTO1]
          Length = 876

 Score = 37.4 bits (85), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 30/140 (21%), Positives = 61/140 (43%), Gaps = 21/140 (15%)

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY-YDFDKEQPFSSDELAQIEKKMQEIIA 131
           + HS  H++  A++ I  E     G ++ D +  +DF   +    +++  +E  +   + 
Sbjct: 563 LNHSATHLLHAALRQILGEHVSQKGSLVNDKYLRFDFSHFEAMKPEQIRLVEDLVNAEVR 622

Query: 132 RDSPFLKQYLSHEKAR-----ELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRG 185
           ++SP + + +  E A+      LF  K E             E V +   G++  +LC G
Sbjct: 623 QNSPVVTELMDLETAKVKGAMALFGEKYE-------------EQVRVLSMGDFSTELCGG 669

Query: 186 PHVRSTGQVKKFFKLMKVAG 205
            H   TG +   F+++  +G
Sbjct: 670 THANRTGDI-GLFRIIAESG 688


>gi|317014630|gb|ADU82066.1| alanyl-tRNA synthetase [Helicobacter pylori Gambia94/24]
          Length = 847

 Score = 37.4 bits (85), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 32/165 (19%), Positives = 68/165 (41%), Gaps = 9/165 (5%)

Query: 42  AINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE 101
            +N  + ++   +++G   I    D R      HS  H++  A++ +        G ++E
Sbjct: 521 GLNFSLLEIKKALKKGDQVIAQVSDERFEIAKHHSATHLLQSALREVLGSHVSQAGSLVE 580

Query: 102 DG-FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVE 160
                +DF   +  + +EL ++E  +      ++   K   S  +   L ++K       
Sbjct: 581 SKRLRFDFSHAKALNDEELEKVEDLV------NAQIFKHLTSQVEHMPLNQAKSRGALAL 634

Query: 161 ILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAG 205
             E       V  +++    +LC G HV +TG +   F+++K +G
Sbjct: 635 FSEKYAENVRVVSFKEAS-IELCGGVHVENTGLIGG-FRILKESG 677


>gi|292654386|ref|YP_003534283.1| alanyl-tRNA synthetase [Haloferax volcanii DS2]
 gi|291372225|gb|ADE04452.1| alanyl-tRNA synthetase [Haloferax volcanii DS2]
          Length = 922

 Score = 37.4 bits (85), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 27/122 (22%), Positives = 54/122 (44%), Gaps = 9/122 (7%)

Query: 75  HSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           H+  H++  A++++  + ++ A      D    D       + +E+ QIE+   EI+ R+
Sbjct: 614 HTATHVIGHAIRTVLGDHIRQAGASKGVDRSRLDVTHYDRITREEVTQIERVANEIVMRN 673

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILES-IPAKENVTLYRQGEWFDLCRGPHVRSTG 192
            P  +++     A       ++ Y  ++ +  IP  E + L   G     C G HV+ TG
Sbjct: 674 IPVKQEWPDRRDA-------EKKYGFDLYQGGIPPGEQIRLIHVGSDVQACGGTHVKRTG 726

Query: 193 QV 194
            +
Sbjct: 727 DI 728


>gi|163781728|ref|ZP_02176728.1| alanyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159882948|gb|EDP76452.1| alanyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 873

 Score = 37.4 bits (85), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 31/129 (24%), Positives = 60/129 (46%), Gaps = 11/129 (8%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY-YDFDKEQPFSSDELAQIEKKMQEIIARD 133
           H+  H++  A++++  E     G ++ D +  +DF   +  + +EL  IE+ + E I  +
Sbjct: 559 HTATHLLHAALKNLLGEHVRQAGSLVADRYLRFDFTHFEALTREELKSIEELVNEKIREN 618

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF-DLCRGPHVRSTG 192
            P     +        ++S   +  V I E     + V +   GE+  +LC G HV  TG
Sbjct: 619 MPVQVNEMD-------YQSALRSGAVAIFEE-KYGDTVRVISAGEFSRELCGGTHVSRTG 670

Query: 193 QVKKFFKLM 201
            +  +FK++
Sbjct: 671 DI-GYFKIL 678


>gi|254670010|emb|CBA04754.1| Alanyl-tRNA synthetase [Neisseria meningitidis alpha153]
          Length = 885

 Score = 37.4 bits (85), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 35/178 (19%), Positives = 76/178 (42%), Gaps = 18/178 (10%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSS 116
           S+     ++ R+  +  HS  H+M +A++ +    V+     +  +   +D    Q  ++
Sbjct: 556 SVTAKVDDEIRNANMRNHSATHLMHKALRDVLGRHVEQKGSLVTAESTRFDISHPQAVTA 615

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARE----LFESKKEAYKVEILESIPAKENVT 172
           +E+A++E+++ E +  +       +S E A++    +   +K   +V +L+         
Sbjct: 616 EEIAEVERRVNEAVLANVAVNAAIMSMEDAQKTGAMMLFGEKYGDEVRVLQ--------- 666

Query: 173 LYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQE 230
               G   +LC G HV  TG +   FK++   G    G      ++ +    W  +QE
Sbjct: 667 --MGGFSTELCGGTHVSRTGDI-GLFKIIS-EGGIAAGVRRIEAITGLNALKWAQEQE 720


>gi|123456416|ref|XP_001315944.1| Phosphoribulokinase / Uridine kinase family protein [Trichomonas
           vaginalis G3]
 gi|121898636|gb|EAY03721.1| Phosphoribulokinase / Uridine kinase family protein [Trichomonas
           vaginalis G3]
          Length = 526

 Score = 37.4 bits (85), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 25/119 (21%), Positives = 56/119 (47%), Gaps = 1/119 (0%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQ 127
           R+  + RH+  + +  ++        + I   + DGFY+  +   P + +++AQ+EK++ 
Sbjct: 30  RTQLLSRHATVNFLITSIYRKLFNRLLRIEHSLGDGFYFMDNSGVPITEEQIAQLEKELH 89

Query: 128 EIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGP 186
            I   ++P     L  E+  + F  +    K+ +L++     N+ + + GE+ D    P
Sbjct: 90  AIFQSETPIELTTLPREEVIKYFSQQGLQDKLGVLKAW-QDANIPVIKCGEFMDYVIEP 147


>gi|219853874|ref|YP_002470996.1| hypothetical protein CKR_0531 [Clostridium kluyveri NBRC 12016]
 gi|219567598|dbj|BAH05582.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 481

 Score = 37.4 bits (85), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 60/272 (22%), Positives = 117/272 (43%), Gaps = 44/272 (16%)

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKG-------- 450
           Q + +  K++N   S+ +   +EK     +TRP  R  ++ LW +   I           
Sbjct: 132 QSYKDLPKLYNQWCSVVR---WEK-----TTRPFLRT-TEFLWQEGHTIHATKEEAEEET 182

Query: 451 --VLDTIKNSSQDRINTGVLLGEGA----FYGPKFEYILKDAI--GRDWQCGTIQ-VDFN 501
             +L+  +   ++ +   VL G+      F G +  Y ++  +  G+  Q GT      N
Sbjct: 183 IRMLNIYEELCREMLAIPVLKGQKTESEKFAGGEATYTIESLMHDGKALQSGTSHYFGQN 242

Query: 502 LPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG--IMIENFKGNL--PLWLSPIQAIV 557
               F   Y++ + +  +   +++  +G   R IG  IM+      L  P  ++P+Q I+
Sbjct: 243 FAKPFEMQYLDKNGKLQY---VYQTSWGITTRIIGALIMVHGDDNGLVVPPRIAPLQVII 299

Query: 558 TTITS---SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
             I       +E A E+   L S  + ++ D  ++   +K  EH +K +PI +  G K+ 
Sbjct: 300 VPIAQHKEGVLEKADELKEEL-SKIVRVKIDDSDKMPGWKFSEHEMKGVPIRLEVGPKDI 358

Query: 615 SERSIGIRRFGSTTTQKV-----SLLDAIPIL 641
           ++  + + R    T +K+     +L D +P L
Sbjct: 359 AKNQVVLVR--RDTREKIMVPMSNLCDEVPAL 388


>gi|198437569|ref|XP_002125465.1| PREDICTED: similar to alanyl-tRNA synthetase [Ciona intestinalis]
          Length = 967

 Score = 37.4 bits (85), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 31/151 (20%), Positives = 63/151 (41%), Gaps = 12/151 (7%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSD 117
           S+E+   E  R   +  HSC HI+   ++ +  E       +  +   +DF  ++  +S 
Sbjct: 586 SVELFIDEQRRQSLMKNHSCTHILNFGLRCVLGEADQRGSLVAPNRLRFDFTAKKAMTSQ 645

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK---EAY--KVEIL------ESIP 166
           ++ + E    +I+ +D     + +  ++A+ +   +    E Y   V +L      +S+ 
Sbjct: 646 QVKETEDVCNQIVNKDEVIYAKPVPLDQAKAIHGLRAIFDETYPDPVRVLSVGVSVDSLV 705

Query: 167 AKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
           A  N          +LC G H+  +G   KF
Sbjct: 706 ADPNFDAAMNTS-VELCGGTHLLRSGHADKF 735


>gi|121635253|ref|YP_975498.1| alanyl-tRNA synthetase [Neisseria meningitidis FAM18]
 gi|205830172|sp|A1KV20|SYA_NEIMF RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|120866959|emb|CAM10719.1| alanyl-tRNA synthetase [Neisseria meningitidis FAM18]
 gi|325138605|gb|EGC61164.1| alanyl-tRNA synthetase [Neisseria meningitidis ES14902]
 gi|325142798|gb|EGC65170.1| alanyl-tRNA synthetase [Neisseria meningitidis 961-5945]
 gi|325198706|gb|ADY94162.1| alanyl-tRNA synthetase [Neisseria meningitidis G2136]
          Length = 874

 Score = 37.4 bits (85), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 35/178 (19%), Positives = 76/178 (42%), Gaps = 18/178 (10%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSS 116
           S+     ++ R+  +  HS  H+M +A++ +    V+     +  +   +D    Q  ++
Sbjct: 545 SVTAKVDDEIRNANMRNHSATHLMHKALRDVLGRHVEQKGSLVTAESTRFDISHPQAVTA 604

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARE----LFESKKEAYKVEILESIPAKENVT 172
           +E+A++E+++ E +  +       +S E A++    +   +K   +V +L+         
Sbjct: 605 EEIAEVERRVNEAVLANVAVNAAIMSMEDAQKTGAMMLFGEKYGDEVRVLQ--------- 655

Query: 173 LYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQE 230
               G   +LC G HV  TG +   FK++   G    G      ++ +    W  +QE
Sbjct: 656 --MGGFSTELCGGTHVSRTGDI-GLFKIIS-EGGIAAGVRRIEAITGLNALKWAQEQE 709


>gi|297584730|ref|YP_003700510.1| alanyl-tRNA synthetase [Bacillus selenitireducens MLS10]
 gi|297143187|gb|ADH99944.1| alanyl-tRNA synthetase [Bacillus selenitireducens MLS10]
          Length = 877

 Score = 37.4 bits (85), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 34/142 (23%), Positives = 62/142 (43%), Gaps = 15/142 (10%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKM 126
           R   +  H+  H++ +A++ +  E V  A   + +D   +DF      + +E+ ++E  +
Sbjct: 559 RKAIIKNHTATHLLHQALKDVLGEHVNQAGSSVGDDRLRFDFSHFGQMTEEEVNRVEAIV 618

Query: 127 QEIIARDSP--FLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLC 183
            E I    P   +   + H K         E Y  E          V + + GE+  +LC
Sbjct: 619 NEKIWASIPVEIMNTSIDHAKEMGAMALFGEKYGKE----------VRVVQVGEYSLELC 668

Query: 184 RGPHVRSTGQVKKFFKLMKVAG 205
            G HV++T ++   FKL+  AG
Sbjct: 669 GGCHVQNTAEI-GLFKLVSEAG 689


>gi|332376799|gb|AEE63539.1| unknown [Dendroctonus ponderosae]
          Length = 329

 Score = 37.4 bits (85), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 52/241 (21%), Positives = 102/241 (42%), Gaps = 24/241 (9%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVC-DLSDPVREGSI-EIITPEDPRSLAVIR---H 75
           +T  D A+ +   + +++V   +NGK    +  P+ +  + E++    P    V +    
Sbjct: 70  STPFDCAKHLGEMVRERSVVGLMNGKTLWHMHKPLPDSCVLELLHHHVPNPQVVNKVFWR 129

Query: 76  SCAHIMAEAV-QSIWPEVQVAI----GPIIEDG-FYYD----FDKEQPFSSDELAQIEKK 125
           +C+ ++   V Q+    VQV +     P ++ G F YD        +P +  EL  +  +
Sbjct: 130 TCSFLLGAVVSQAFKDNVQVHLHSFPSPNVKSGSFIYDVQLGLSNWEP-TVAELKVLSLE 188

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN--VTLYRQGEWFDLC 183
             +   ++ P     ++   A E+FE+    +K + +  I A  +  VTL++ G   D+ 
Sbjct: 189 FIKFCQKEQPIECLDVNRNTALEIFENN--PHKSQQIPDIAAHNSNKVTLFKVGSHIDIS 246

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGP + +T Q+ +    + V  A       +  + R  G A      +  + Y L E   
Sbjct: 247 RGPMLPNTNQMGR----VTVTNAIKLDTDIKEPIYRFQGVALPRSIRINHFAYSLIEDRG 302

Query: 244 R 244
           R
Sbjct: 303 R 303


>gi|328881150|emb|CCA54389.1| Alanyl-tRNA synthetase [Streptomyces venezuelae ATCC 10712]
          Length = 889

 Score = 37.4 bits (85), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 36/154 (23%), Positives = 65/154 (42%), Gaps = 14/154 (9%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H+  +A++          G   + G F +DF          L  +E+K+ E+++R+
Sbjct: 573 HSATHLTHQALRDALGPTAAQAGSENQPGRFRFDFGSPNAVPGAVLTDVEQKINEVLSRE 632

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF-DLCRGPHVRSTG 192
                    H +   + E+K++    E  E     E V +   G++  +LC G HV +T 
Sbjct: 633 LEV------HAEVMPIDEAKRQGAIAEFGEKY--GEKVRVVTIGDFSKELCGGTHVHNTA 684

Query: 193 QVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWN 226
           Q      L+K+ G    G   R + + +   A+N
Sbjct: 685 Q----LGLVKLLGESSIGSGVRRIEALVGVDAYN 714


>gi|319655041|ref|ZP_08009111.1| seryl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
 gi|317393265|gb|EFV74033.1| seryl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
          Length = 425

 Score = 37.4 bits (85), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 35/175 (20%), Positives = 73/175 (41%), Gaps = 17/175 (9%)

Query: 242 EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRRKIKDD--YEEIN 295
           E + H  +A ++DL          GS  +F+   G ++ + L ++M     D+  Y+E+ 
Sbjct: 136 EPKPHWDVATDLDLLDFERASKVTGSRFVFYKGLGARLERALFNFMLDLHTDEHGYKEVL 195

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
            P ++++     +G    +  + F ++  D        + L P        +    + + 
Sbjct: 196 PPYMVNRTSMTGTGQLPKFEEDAFLIESED--------YFLIPTAEVPVTNMHREEILNA 247

Query: 356 RELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
            ELP+  A F + +R+E   +     GL+R   F + +   F   E+ + E  K+
Sbjct: 248 DELPINYAAFSACFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEESYEELEKL 302


>gi|307265211|ref|ZP_07546770.1| alanyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
 gi|326390157|ref|ZP_08211718.1| alanyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
 gi|306919833|gb|EFN50048.1| alanyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
 gi|325993805|gb|EGD52236.1| alanyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
          Length = 877

 Score = 37.4 bits (85), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 62/133 (46%), Gaps = 12/133 (9%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKM 126
           R  A   H+  H++ +A++ I  + V  A   + +D   +DF   Q  + +EL QIE ++
Sbjct: 556 RRNAARNHTATHLLHKALKEILGDHVHQAGSLVADDRLRFDFSHYQAVTKEELKQIENRV 615

Query: 127 QEIIARDSPFLKQYLS-HEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCR 184
            E I        Q L+ H + +   E+ KE       E    K  V + +  ++  +LC 
Sbjct: 616 NEKIY-------QSLNVHIEEKTYDEAVKEGAVALFTEKYGDK--VRVVKIDDYSMELCG 666

Query: 185 GPHVRSTGQVKKF 197
           G HV++T ++  F
Sbjct: 667 GTHVKNTNEIGIF 679


>gi|254881607|ref|ZP_05254317.1| alanyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
 gi|319642992|ref|ZP_07997626.1| alanyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
 gi|254834400|gb|EET14709.1| alanyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
 gi|317385357|gb|EFV66302.1| alanyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
          Length = 152

 Score = 37.4 bits (85), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 27/124 (21%), Positives = 57/124 (45%), Gaps = 9/124 (7%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDS 134
           H+  H++   + +++   +     I       DF  +      ++ +IE  + E++ R+ 
Sbjct: 18  HTTEHVINRTMVNLFGCGRAISAHIERKKSKLDFALQTCPEEADIIRIENTVNEVLRRNL 77

Query: 135 PFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD-LCRGPHVRSTGQ 193
           P   +++S E+A   F+ K+   K        A E V + + G++ + LC G HV +T +
Sbjct: 78  PVTMEFISQEEAIGRFDMKRLPEK--------ASETVRIVKVGDYDECLCIGQHVENTSE 129

Query: 194 VKKF 197
           +  F
Sbjct: 130 IGTF 133


>gi|238758257|ref|ZP_04619436.1| Alanyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
 gi|238703587|gb|EEP96125.1| Alanyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
          Length = 847

 Score = 37.4 bits (85), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 30/140 (21%), Positives = 61/140 (43%), Gaps = 21/140 (15%)

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY-YDFDKEQPFSSDELAQIEKKMQEIIA 131
           + HS  H++  A++    E     G ++ D +  +DF   +    +++ Q+E  + E I 
Sbjct: 534 LNHSATHLLHAALRKTLGEHVAQKGSLVNDKYLRFDFSHFEAMKPEQIRQVEDLVNEQIR 593

Query: 132 RDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRG 185
           R+ P   + +  + A+E     LF  K +             + V +   G++  +LC G
Sbjct: 594 RNLPVETEVMELDTAKEKGAMALFGEKYD-------------DQVRVLTMGDFSTELCGG 640

Query: 186 PHVRSTGQVKKFFKLMKVAG 205
            H   TG +   F+++  +G
Sbjct: 641 IHASRTGDI-GLFRILSESG 659


>gi|188534789|ref|YP_001908586.1| Alanyl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
 gi|188029831|emb|CAO97712.1| Alanyl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
          Length = 875

 Score = 37.4 bits (85), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 35/165 (21%), Positives = 70/165 (42%), Gaps = 13/165 (7%)

Query: 36  KKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           K A A+  +GK+   +  +R G S+     E  R    + HS  H++  A++ +      
Sbjct: 526 KYAQAIGHSGKLA--AGKLRVGDSVSAQVDEARRERIRLNHSATHLLHAALRQVLGHHVA 583

Query: 95  AIGPIIEDGFY-YDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESK 153
             G ++ D +  +DF   +  ++ E+ Q+E+ +   + R+       +  E A+      
Sbjct: 584 QKGSLVNDKYLRFDFSHFEAMTAQEIRQVEEIVNAQVRRNLSIETNIMELEAAK------ 637

Query: 154 KEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
             A+    L      ++V +   G++  +LC G H   TG +  F
Sbjct: 638 --AHGAMALFGEKYDDHVRVLSMGDFSTELCGGTHANRTGDIGLF 680


>gi|225572273|ref|ZP_03781137.1| hypothetical protein RUMHYD_00567 [Blautia hydrogenotrophica DSM
           10507]
 gi|225040257|gb|EEG50503.1| hypothetical protein RUMHYD_00567 [Blautia hydrogenotrophica DSM
           10507]
          Length = 868

 Score = 37.4 bits (85), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 62/138 (44%), Gaps = 21/138 (15%)

Query: 75  HSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H++ +A++ +    V+     +  D   +DF   Q  + +E+ ++EK + + I   
Sbjct: 555 HSATHLLQKALKVVLGAHVEQKGSLVTPDRLRFDFAHFQAMTPEEMEKVEKLVNQEIQEA 614

Query: 134 SPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGEWF-DLCRGPH 187
            P     +  E+A++     LF  K +             E V +   GE+  +LC G H
Sbjct: 615 LPVRTDIMDIEEAKKTGAMALFGEKYD-------------EEVRVVSMGEFSKELCGGTH 661

Query: 188 VRSTGQVKKFFKLMKVAG 205
           V +T Q+   FKL+  +G
Sbjct: 662 VSNTSQI-LLFKLVSESG 678


>gi|260171843|ref|ZP_05758255.1| alanyl-tRNA synthetase [Bacteroides sp. D2]
 gi|315920155|ref|ZP_07916395.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313694030|gb|EFS30865.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 872

 Score = 37.4 bits (85), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 32/136 (23%), Positives = 60/136 (44%), Gaps = 20/136 (14%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEK 124
           D R+     HS  H++  A++ +  E     G ++  D   +DF   Q  + +E+ ++E 
Sbjct: 554 DKRAACAANHSATHLLDAALREVLGEHIEQKGSLVTPDSLRFDFSHFQKVTDEEIRKVEH 613

Query: 125 KMQEIIARDSPFLKQY--LSHEKAREL----FESKKEAYKVEILESIPAKENVTLYRQGE 178
            +   +  + P LK+Y  +  E+A+EL       +K   KV +++             G 
Sbjct: 614 IVNARVRANIP-LKEYRNIPIEEAKELGAIALFGEKYGDKVRVIQF------------GS 660

Query: 179 WFDLCRGPHVRSTGQV 194
             + C G HV +TG +
Sbjct: 661 SIEFCGGTHVAATGNI 676


>gi|158337563|ref|YP_001518738.1| alanyl-tRNA synthetase [Acaryochloris marina MBIC11017]
 gi|205829961|sp|B0CFX4|SYA_ACAM1 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|158307804|gb|ABW29421.1| alanyl-tRNA synthetase [Acaryochloris marina MBIC11017]
          Length = 873

 Score = 37.4 bits (85), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 31/135 (22%), Positives = 62/135 (45%), Gaps = 15/135 (11%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           H+  H++  A+++I  E     G ++  D   +DF+  Q  + +++ +IE ++   IA  
Sbjct: 559 HTATHLLQAALKNIVDESIGQAGSLVAFDRLRFDFNYNQAVTPEQIQEIETQINTWIAEA 618

Query: 134 SPFLKQYL--SHEKARELFESKKEAYKVEI-LESIPAKENVTLYRQGEWFDLCRGPHVRS 190
                + +  +  KA+       E Y  E+ +  +P          G   +LC G HV++
Sbjct: 619 HTTETEVMPIAEAKAKGAVAMFGEKYGAEVRVMDVP----------GVSMELCGGTHVKN 668

Query: 191 TGQVKKFFKLMKVAG 205
           T ++   FK++  AG
Sbjct: 669 TSEI-GLFKIVTEAG 682


>gi|319952367|ref|YP_004163634.1| alanyl-tRNA synthetase [Cellulophaga algicola DSM 14237]
 gi|319421027|gb|ADV48136.1| alanyl-tRNA synthetase [Cellulophaga algicola DSM 14237]
          Length = 871

 Score = 37.0 bits (84), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 39/169 (23%), Positives = 69/169 (40%), Gaps = 23/169 (13%)

Query: 49  DLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY-YD 107
           +L   VRE + + +  +  R      H+  H++ +A++ I        G  +   +  +D
Sbjct: 538 NLPKEVRE-TFKAVVDQKQRRRTEANHTATHLLHQALREILGAHVEQKGSAVHSKYLRFD 596

Query: 108 FDKEQPFSSDELAQIEKKMQEIIARDSPFLK------QYLSHEKARELFESKKEAYKVEI 161
           F      ++DELA++E+ +   I  + P  +      Q    + A  LF  K        
Sbjct: 597 FSHFSKMTADELAEVERFVNARIEGNLPLEEGRNIPMQTAIEQGAMALFGEK-------- 648

Query: 162 LESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRG 210
                  + V   R G+  +LC G HV++TG +  F   +K  GA   G
Sbjct: 649 -----YGDAVRTIRFGKSIELCGGTHVKNTGDIWHF--KIKSEGAVASG 690


>gi|325134725|gb|EGC57364.1| alanyl-tRNA synthetase [Neisseria meningitidis M13399]
 gi|325205670|gb|ADZ01123.1| alanyl-tRNA synthetase [Neisseria meningitidis M04-240196]
          Length = 874

 Score = 37.0 bits (84), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 35/178 (19%), Positives = 76/178 (42%), Gaps = 18/178 (10%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSS 116
           S+     ++ R+  +  HS  H+M +A++ +    V+     +  +   +D    Q  ++
Sbjct: 545 SVTAKVDDEIRNANMRNHSATHLMHKALRDVLGRHVEQKGSLVTAESTRFDISHPQAVTA 604

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARE----LFESKKEAYKVEILESIPAKENVT 172
           +E+A++E+++ E +  +       +S E A++    +   +K   +V +L+         
Sbjct: 605 EEIAEVERRVNEAVLANVAVNAAIMSMEDAQKTGAMMLFGEKYGDEVRVLQ--------- 655

Query: 173 LYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQE 230
               G   +LC G HV  TG +   FK++   G    G      ++ +    W  +QE
Sbjct: 656 --MGGFSTELCGGTHVSRTGDI-GLFKIIS-EGGIAAGVRRIEAITGLNALKWAQEQE 709


>gi|325267938|ref|ZP_08134587.1| alanine--tRNA ligase [Kingella denitrificans ATCC 33394]
 gi|324980624|gb|EGC16287.1| alanine--tRNA ligase [Kingella denitrificans ATCC 33394]
          Length = 873

 Score = 37.0 bits (84), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 36/148 (24%), Positives = 67/148 (45%), Gaps = 23/148 (15%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQP--FSSDELAQIE 123
           D R+  +  HS  H+M +A++ +     V     +++     FD   P   S++E+A++E
Sbjct: 553 DIRNSIMRNHSVTHLMHKALRDVLG-THVEQKGSLQNAELTRFDISHPQGISAEEIAEVE 611

Query: 124 KKMQEIIARDSPFLKQYLSHEKARE-----LFESKKEAYKVEILESIPAKENVTLYRQGE 178
           +++   I  + P   + +S E A++     LF  K   +             V +   G+
Sbjct: 612 RRVNAAIIANVPVKVETMSIEDAQKSGAMMLFGEKYGDF-------------VRVITMGD 658

Query: 179 W-FDLCRGPHVRSTGQVKKFFKLMKVAG 205
           +  +LC G HV  TG +  FFK++   G
Sbjct: 659 YSTELCGGTHVARTGDI-GFFKIISEGG 685


>gi|77410746|ref|ZP_00787105.1| alanyl-tRNA synthetase [Streptococcus agalactiae CJB111]
 gi|77163282|gb|EAO74234.1| alanyl-tRNA synthetase [Streptococcus agalactiae CJB111]
          Length = 872

 Score = 37.0 bits (84), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 34/140 (24%), Positives = 64/140 (45%), Gaps = 10/140 (7%)

Query: 68  RSLAVIR-HSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY-YDFDKEQPFSSDELAQIEKK 125
           R LAV + H+  H++  A+ ++  E     G + E+ F  +DF   +  S++EL  IE++
Sbjct: 559 RRLAVEKNHTATHLLHAALHNVIGEHATQAGSLNEEEFLRFDFTHFEAVSNEELRHIEQE 618

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           + E I  D          E A+E+        K   +  +    N ++       +LC G
Sbjct: 619 VNEQIWNDLTITTTETDVETAKEMGAMALFGEKYGKVVRVVQIGNYSV-------ELCGG 671

Query: 186 PHVRSTGQVKKFFKLMKVAG 205
            H+ ++ ++   FK++K  G
Sbjct: 672 THLNNSSEI-GLFKIVKEEG 690


>gi|189468166|ref|ZP_03016951.1| hypothetical protein BACINT_04561 [Bacteroides intestinalis DSM
           17393]
 gi|189436430|gb|EDV05415.1| hypothetical protein BACINT_04561 [Bacteroides intestinalis DSM
           17393]
          Length = 872

 Score = 37.0 bits (84), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 32/132 (24%), Positives = 58/132 (43%), Gaps = 12/132 (9%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEK 124
           + R+     HS  H++  A++ +  E     G ++  D   +DF   Q  + +E+ Q+E 
Sbjct: 554 EKRAACAANHSATHLLDSALREVLGEHVEQKGSLVTPDSLRFDFSHFQKVTDEEIRQVEH 613

Query: 125 KMQEIIARDSPFLKQY--LSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
            +   I  + P LK+Y  +  E A+EL        K          ++V + + G   + 
Sbjct: 614 LVNAKIRANIP-LKEYRNIPIEDAKELGAIALFGEKY--------GDHVRVIQFGSSVEF 664

Query: 183 CRGPHVRSTGQV 194
           C G HV +TG +
Sbjct: 665 CGGTHVAATGNI 676


>gi|313205146|ref|YP_004043803.1| alanyL-tRNA synthetase [Paludibacter propionicigenes WB4]
 gi|312444462|gb|ADQ80818.1| alanyl-tRNA synthetase [Paludibacter propionicigenes WB4]
          Length = 869

 Score = 37.0 bits (84), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 29/130 (22%), Positives = 52/130 (40%), Gaps = 8/130 (6%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEK 124
           + R      HS  H++ EA++ +        G  +  D   +DF   Q  + +E+  +E 
Sbjct: 553 EKRKATECNHSATHLLHEALREVLGTHVEQKGSFVSPDALRFDFSHFQKLTKEEIRAVEA 612

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
                I  + P        ++ RE   ++ +A     L      E V + + G   +LC 
Sbjct: 613 IANRKIRENYPL-------QERRETPIAEAQAMGAMALFGEKYGETVRVIQFGSSVELCG 665

Query: 185 GPHVRSTGQV 194
           G HV +TG +
Sbjct: 666 GTHVSATGNI 675


>gi|261839960|gb|ACX99725.1| alanyl-tRNA synthetase [Helicobacter pylori 52]
          Length = 847

 Score = 37.0 bits (84), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 32/165 (19%), Positives = 69/165 (41%), Gaps = 9/165 (5%)

Query: 42  AINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE 101
            +N  + ++   +++G   I    D R      HS  H++  A++ +        G ++E
Sbjct: 521 GLNFSLLEIKKALKKGDQVIAQVSDERLEIAKHHSATHLLQSALREVLGSHVSQAGSLVE 580

Query: 102 DG-FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVE 160
                +DF   +  + +EL ++E  +      ++   K   S  +   L ++K +     
Sbjct: 581 SKRLRFDFSHPKALNDEELEKVEDLV------NAQIFKHLTSQVEHMPLNQAKDKGALAL 634

Query: 161 ILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAG 205
             E       V  +++    +LC G HV +TG +   F+++K +G
Sbjct: 635 FSEKYAENVRVVSFKEAS-IELCGGIHVENTGLIGG-FRILKESG 677


>gi|89891182|ref|ZP_01202689.1| GTP pyrophosphokinase, RelA/SpoT family [Flavobacteria bacterium
           BBFL7]
 gi|89516494|gb|EAS19154.1| GTP pyrophosphokinase, RelA/SpoT family [Flavobacteria bacterium
           BBFL7]
          Length = 733

 Score = 37.0 bits (84), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 1/60 (1%)

Query: 10  PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPR 68
           P G +K+ P  AT  D A SI   +  K     +NGK+  LS  ++ G  ++IIT E+ +
Sbjct: 408 PKGELKSLPKGATPLDFAFSIHTEVGLKTRGARVNGKLVPLSHELKSGDQVDIITSENQK 467


>gi|325144845|gb|EGC67133.1| alanyl-tRNA synthetase [Neisseria meningitidis M01-240013]
          Length = 874

 Score = 37.0 bits (84), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 35/178 (19%), Positives = 76/178 (42%), Gaps = 18/178 (10%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSS 116
           S+     ++ R+  +  HS  H+M +A++ +    V+     +  +   +D    Q  ++
Sbjct: 545 SVTAKVDDEIRNANMRNHSATHLMHKALRDVLGRHVEQKGSLVTTESTRFDISHPQAVTA 604

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARE----LFESKKEAYKVEILESIPAKENVT 172
           +E+A++E+++ E +  +       +S E A++    +   +K   +V +L+         
Sbjct: 605 EEIAEVERRVNEAVLANVAVNAAIMSMEDAQKTGAMMLFGEKYGDEVRVLQ--------- 655

Query: 173 LYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQE 230
               G   +LC G HV  TG +   FK++   G    G      ++ +    W  +QE
Sbjct: 656 --MGGFSTELCGGTHVSRTGDI-GLFKIIS-EGGIAAGVRRIEAITGLNALKWAQEQE 709


>gi|254673270|emb|CBA08330.1| Alanyl-tRNA synthetase [Neisseria meningitidis alpha275]
          Length = 885

 Score = 37.0 bits (84), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 35/178 (19%), Positives = 76/178 (42%), Gaps = 18/178 (10%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSS 116
           S+     ++ R+  +  HS  H+M +A++ +    V+     +  +   +D    Q  ++
Sbjct: 556 SVTAKVDDEIRNANMRNHSATHLMHKALRDVLGRHVEQKGSLVTAESTRFDISHPQAVTA 615

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARE----LFESKKEAYKVEILESIPAKENVT 172
           +E+A++E+++ E +  +       +S E A++    +   +K   +V +L+         
Sbjct: 616 EEIAEVERRVNEAVLANVAVNAAIMSMEDAQKTGAMMLFGEKYGDEVRVLQ--------- 666

Query: 173 LYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQE 230
               G   +LC G HV  TG +   FK++   G    G      ++ +    W  +QE
Sbjct: 667 --MGGFSTELCGGTHVSRTGDI-GLFKIIS-EGGIAAGVRRIEAITGLNALKWAQEQE 720


Searching..................................................done


Results from round 2




>gi|254781004|ref|YP_003065417.1| threonyl-tRNA synthetase [Candidatus Liberibacter asiaticus str.
           psy62]
 gi|254040681|gb|ACT57477.1| threonyl-tRNA synthetase [Candidatus Liberibacter asiaticus str.
           psy62]
          Length = 652

 Score =  810 bits (2093), Expect = 0.0,   Method: Composition-based stats.
 Identities = 652/652 (100%), Positives = 652/652 (100%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIE 60
           MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIE
Sbjct: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIE 60

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA
Sbjct: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF
Sbjct: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE
Sbjct: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVL 300
           SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVL
Sbjct: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVL 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV
Sbjct: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF
Sbjct: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE
Sbjct: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE
Sbjct: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI
Sbjct: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK
Sbjct: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652


>gi|227821825|ref|YP_002825795.1| threonyl-tRNA synthetase [Sinorhizobium fredii NGR234]
 gi|254783532|sp|C3MB49|SYT_RHISN RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|227340824|gb|ACP25042.1| ThrS; threonyl-tRNA synthetase [Sinorhizobium fredii NGR234]
          Length = 661

 Score =  765 bits (1974), Expect = 0.0,   Method: Composition-based stats.
 Identities = 416/652 (63%), Positives = 534/652 (81%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIE 60
           M   + LTFPDGS++ F    TG DVAESIS+SLAKKAVA+A++G++ DLSDP+ +G IE
Sbjct: 1   MSHSVSLTFPDGSVREFAAGTTGRDVAESISKSLAKKAVAIALDGELRDLSDPIADGKIE 60

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           I+T ED R+L +IRH  AH+MAEAVQ +WP  QV IGP+I++GFYYDF K +PF+ D+L 
Sbjct: 61  IVTREDKRALELIRHDAAHVMAEAVQELWPGTQVTIGPVIDNGFYYDFAKNEPFTPDDLP 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEKKM+EIIAR++PF K+  S +KA+E+F +K E+YKVE++++IP  +++ +Y QG+WF
Sbjct: 121 VIEKKMKEIIARNNPFSKEVWSRDKAKEVFAAKGESYKVELVDAIPEGQDLKIYYQGDWF 180

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ STGQ+   FKLMKVAGAYWRGDSN PML+RIYGTAW+TQ+EL QYL+ L E
Sbjct: 181 DLCRGPHMASTGQIGTAFKLMKVAGAYWRGDSNNPMLTRIYGTAWHTQEELDQYLHVLAE 240

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVL 300
           +EKRDHR+L REMDLFH  E+G GV+FWH KGW++FQ+L++YMRR+++ DY+E+N PQVL
Sbjct: 241 AEKRDHRRLGREMDLFHFQEEGPGVVFWHGKGWRVFQSLVAYMRRRLEVDYQEVNAPQVL 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D+ LW+ SGHW  YR NMF V  A D   D R FALKPMNCPGH+ +F HGLKSYRELPV
Sbjct: 301 DKSLWETSGHWGWYRDNMFKVTVAGDETDDDRVFALKPMNCPGHIQIFKHGLKSYRELPV 360

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AEFG+V+R EPSG+LHGLMRVRGFTQDDAH+FCT EQM  ECLKI++LI+S+Y+DFGF
Sbjct: 361 RMAEFGAVHRYEPSGALHGLMRVRGFTQDDAHIFCTDEQMAAECLKINDLILSVYEDFGF 420

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           ++I+VKLSTRP+KRVGSDALWD AE +M  VL+TI+  S+ RI TG+L GEGAFYGPKFE
Sbjct: 421 KEIVVKLSTRPDKRVGSDALWDRAEAVMTDVLNTIEAQSEGRIKTGILPGEGAFYGPKFE 480

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           Y LKDAIGR+WQCGT QVDFNLP RF AFY++  SEK  PVMIHRA+ GS+ERF+GI++E
Sbjct: 481 YTLKDAIGREWQCGTTQVDFNLPERFGAFYIDKDSEKRQPVMIHRAICGSMERFLGILLE 540

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           N+ G++PLW+SP+Q +V TITS A +Y +E+A  L+   L++ETDFRNE INYKIREHS+
Sbjct: 541 NYAGHMPLWISPLQVVVATITSDADDYGREVAARLREAGLTVETDFRNEKINYKIREHSV 600

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
            K+P+I++CG +EA ERS+ IRR GS     +SL +A+  L+ E++ PD ++
Sbjct: 601 TKVPVIVVCGKREAEERSVNIRRLGSQAQTAMSLEEAVAALSSEAMAPDLKR 652


>gi|315122407|ref|YP_004062896.1| threonyl-tRNA synthetase [Candidatus Liberibacter solanacearum
           CLso-ZC1]
 gi|313495809|gb|ADR52408.1| threonyl-tRNA synthetase [Candidatus Liberibacter solanacearum
           CLso-ZC1]
          Length = 653

 Score =  764 bits (1973), Expect = 0.0,   Method: Composition-based stats.
 Identities = 537/652 (82%), Positives = 599/652 (91%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIE 60
           MPS+I LTFPDG IKNFP H TG DVAESIS+S+AKKA+AVAING +CDLSD ++ GSIE
Sbjct: 1   MPSNITLTFPDGLIKNFPAHTTGYDVAESISKSIAKKAIAVAINGTICDLSDTIQTGSIE 60

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           IITPEDPRSL VIRHSCAHIMAEAVQSIWP+ QVAIGP+IE+GFYYDF++E+PFSSD+ A
Sbjct: 61  IITPEDPRSLVVIRHSCAHIMAEAVQSIWPKTQVAIGPVIENGFYYDFNREEPFSSDDFA 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IEKKM EI+ RDSPF K+ LS E+AR+LFESK E YK+EILE IPA+++VT+Y QGEW 
Sbjct: 121 KIEKKMHEIVTRDSPFCKKRLSREQARKLFESKNETYKLEILEKIPAEQDVTIYNQGEWL 180

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV+STGQ+KKFFKLMKVAGAYWRGD+ RPMLSRIYGTAWN+QQELTQYL F+ E
Sbjct: 181 DLCRGPHVQSTGQIKKFFKLMKVAGAYWRGDNTRPMLSRIYGTAWNSQQELTQYLDFIVE 240

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVL 300
           SEKRDHRK+AREMDLFH AEDGSGVIFWH+KGWK FQTLISYMRRKIKDDYEEINTPQVL
Sbjct: 241 SEKRDHRKIAREMDLFHTAEDGSGVIFWHQKGWKTFQTLISYMRRKIKDDYEEINTPQVL 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           DQ+LW+QSGHWD YRANMFAV+CAD+TIKDLR+FALKPMNCPGHV +F HGLKSYRELPV
Sbjct: 301 DQNLWKQSGHWDWYRANMFAVQCADETIKDLRSFALKPMNCPGHVEIFKHGLKSYRELPV 360

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF ECLKIHNLI+SIYKDFGF
Sbjct: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFEECLKIHNLIVSIYKDFGF 420

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           E I VKLSTRPEKRVGSDALWDDAE+IM+ VL+TIK SSQ +INTG+L GEGAFYGPKFE
Sbjct: 421 ENITVKLSTRPEKRVGSDALWDDAESIMQTVLNTIKTSSQSKINTGILPGEGAFYGPKFE 480

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           YILKDAIGR+WQCGT Q+DFNLP RFNAFY+NS SEKCHPVMIHRAVFGSIERFIGIMIE
Sbjct: 481 YILKDAIGREWQCGTTQIDFNLPHRFNAFYINSQSEKCHPVMIHRAVFGSIERFIGIMIE 540

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           NFKG+LPLWLSP+QA+VTTITSS++EYAQE+  LLKS+ LSIETDFRNE INYKIREHS 
Sbjct: 541 NFKGHLPLWLSPVQAVVTTITSSSIEYAQEVTALLKSNDLSIETDFRNEKINYKIREHSS 600

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           KKIP+IIICGDKE  ERSI IRR GS T+Q +++LDA+ ++T+ESLPPD  K
Sbjct: 601 KKIPLIIICGDKETQERSIVIRRLGSKTSQSLNILDAVQMITQESLPPDMIK 652


>gi|150396275|ref|YP_001326742.1| threonyl-tRNA synthetase [Sinorhizobium medicae WSM419]
 gi|166225503|sp|A6U8C7|SYT_SINMW RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|150027790|gb|ABR59907.1| threonyl-tRNA synthetase [Sinorhizobium medicae WSM419]
          Length = 660

 Score =  760 bits (1962), Expect = 0.0,   Method: Composition-based stats.
 Identities = 420/652 (64%), Positives = 530/652 (81%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIE 60
           M   + LTFPDGS++ F    TG DVAESIS+SLAKK+VA+AI+G++ DLSDPV EG IE
Sbjct: 1   MSHSVSLTFPDGSVREFAPGTTGRDVAESISKSLAKKSVAIAIDGELRDLSDPVTEGRIE 60

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           I+T ED R+L +IRH  AH+MAEAVQ +WP  QV IGP+I++GFYYDF K +PF+ D+L 
Sbjct: 61  IVTREDKRALELIRHDAAHVMAEAVQELWPGTQVTIGPVIDNGFYYDFAKNEPFTPDDLP 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEK+M+EIIAR+ PF K+  S +KA+E+F  K E+YKVE++++IP  +++ +Y QG+WF
Sbjct: 121 VIEKRMREIIARNKPFTKEVWSRDKAKEVFAVKGESYKVELVDAIPEGQDLKIYYQGDWF 180

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ STGQ+   FKLMKVAGAYWRGDSN PML+RIYGTAW+TQ+EL QYL+ L E
Sbjct: 181 DLCRGPHMASTGQIGTAFKLMKVAGAYWRGDSNNPMLTRIYGTAWHTQEELDQYLHVLAE 240

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVL 300
           +EKRDHR+L REMDLFH  E+G GV+FWH KGW+IFQ+L++YMRR+++ DY+E+N PQVL
Sbjct: 241 AEKRDHRRLGREMDLFHFQEEGPGVVFWHGKGWRIFQSLVAYMRRRLEGDYQEVNAPQVL 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D+ LW+ SGHW  YR NMF V  A D   D R FALKPMNCPGH+ +F HGLKSYRELPV
Sbjct: 301 DKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHIQIFKHGLKSYRELPV 360

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLAEFG+V+R EPSG+LHGLMRVRGFTQDDAH+FCT EQM  ECLKI++LI+S+Y+DFGF
Sbjct: 361 RLAEFGAVHRYEPSGALHGLMRVRGFTQDDAHIFCTDEQMAAECLKINDLILSVYEDFGF 420

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           ++I+VKLSTRPEKRVGSD LWD AE +M  VL TI+  S+ RI TG+L GEGAFYGPKFE
Sbjct: 421 KEIVVKLSTRPEKRVGSDELWDRAEAVMTEVLKTIEAQSEGRIKTGILPGEGAFYGPKFE 480

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           Y LKDAIGR+WQCGT QVDFNLP RF AFY++S SEK  PVMIHRA+ GS+ERF+GI++E
Sbjct: 481 YTLKDAIGREWQCGTTQVDFNLPERFGAFYIDSESEKRQPVMIHRAICGSMERFLGILLE 540

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           NF G++PLW+SP+Q +V TITS A +Y +E+A  L+   L++ETDFRNE INYK+REHS+
Sbjct: 541 NFAGHMPLWISPLQVVVATITSEADDYGREVAERLRDAGLTVETDFRNEKINYKVREHSV 600

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
            K+P+I++CG +EA ERS+ IRR GS     +SL +A+  L+ E+  PD ++
Sbjct: 601 TKVPVIVVCGKREAEERSVNIRRLGSQAQTAMSLDEAVASLSAEATAPDLKR 652


>gi|163760291|ref|ZP_02167374.1| threonyl-tRNA synthetase [Hoeflea phototrophica DFL-43]
 gi|162282690|gb|EDQ32978.1| threonyl-tRNA synthetase [Hoeflea phototrophica DFL-43]
          Length = 668

 Score =  759 bits (1960), Expect = 0.0,   Method: Composition-based stats.
 Identities = 408/658 (62%), Positives = 522/658 (79%), Gaps = 6/658 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIE 60
           M S I LTFPDGS + +P   TG +VAESIS+SLAKKAVA+A++G++ DLSDPVR+G++E
Sbjct: 1   MASAISLTFPDGSKREYPAGTTGREVAESISKSLAKKAVAIALDGELTDLSDPVRDGALE 60

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           I+T  DPR+L +IRH  AH+MAEAVQ ++P  QV IGP+IE+GFYYDF K +PF+ ++L 
Sbjct: 61  IVTRTDPRALELIRHDAAHVMAEAVQELFPGTQVTIGPVIENGFYYDFAKNEPFTPEDLP 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEKKM+EIIAR+ PF K+  S ++AR +F  K EAYKVE++ESI + E++ +YRQG+WF
Sbjct: 121 VIEKKMKEIIARNKPFTKEVWSRDEARRVFAEKGEAYKVELIESINSDEDLKIYRQGDWF 180

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           D+CRGPH+ STGQ+   FKLMKVAGAYWRGDSN  ML+RIYGTAW  Q EL  YL+ LEE
Sbjct: 181 DMCRGPHMASTGQIGTAFKLMKVAGAYWRGDSNNTMLTRIYGTAWADQAELDAYLHMLEE 240

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVL 300
           +EKRDHR+L REMDLFH  E+G GV+FWH KGWK+FQ L++YMRR++++DYEE+N PQ+L
Sbjct: 241 AEKRDHRRLGREMDLFHFQEEGPGVVFWHSKGWKMFQNLLAYMRRRLENDYEEVNAPQIL 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKC------ADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
           D+ LW+ SGHW  Y+ NMFAVK        DD   D R FALKPMNCPGHV +F HGLKS
Sbjct: 301 DKSLWETSGHWGWYQENMFAVKSAHAFTNPDDEEADNRIFALKPMNCPGHVQIFKHGLKS 360

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YR+LPVRLAEFG+V+R EPSG+LHGLMRVR FTQDDAHVFCT+EQ+  ECLKI++L++S+
Sbjct: 361 YRDLPVRLAEFGNVHRYEPSGALHGLMRVRAFTQDDAHVFCTEEQLEAECLKINDLMMSV 420

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           Y DFGFE+++VKL+TRPEKRVG+DA+WD AE+I++ VLD +   S  RI  G+  GEG F
Sbjct: 421 YSDFGFEEVVVKLATRPEKRVGTDAMWDHAEDILRKVLDKMAAESGGRIKVGINEGEGTF 480

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPKFEY L+DAIGRDWQCGT QVDFNLP RF AFY+ + SEK  PVM+HRA+ GS+ERF
Sbjct: 481 YGPKFEYTLRDAIGRDWQCGTTQVDFNLPERFGAFYIGADSEKKQPVMVHRAICGSLERF 540

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
           +GI+IE+  G++PLW +P+Q +V TITS A +Y   +A  L+   L +ETDFRNE INYK
Sbjct: 541 LGILIESHAGHMPLWFAPLQVVVATITSEADDYGAAVAQRLRDAGLQVETDFRNEKINYK 600

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           +REHS+ K+P+I++CG +EA E+++ +RR GS     +SL DAI  L +E+ PPD  +
Sbjct: 601 VREHSVAKVPVILVCGMREAEEQTVNVRRLGSRDQVSMSLADAIAKLAEEATPPDVLR 658


>gi|222086050|ref|YP_002544582.1| threonyl-tRNA synthetase [Agrobacterium radiobacter K84]
 gi|254783503|sp|B9JFG4|SYT_AGRRK RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|221723498|gb|ACM26654.1| threonyl-tRNA synthetase [Agrobacterium radiobacter K84]
          Length = 662

 Score =  757 bits (1954), Expect = 0.0,   Method: Composition-based stats.
 Identities = 424/652 (65%), Positives = 523/652 (80%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIE 60
           M   + LTFPDGS++++   ATG DVAESIS+SLAKKAVA+AI+G V DLS+PV +G IE
Sbjct: 1   MSQSVSLTFPDGSVRSYDAGATGRDVAESISKSLAKKAVAIAIDGTVRDLSEPVADGKIE 60

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           IIT  D R+L +IRH  AH+MAEAVQ +WP  QV IGP+IE+GFYYDF K +PF+ D+L 
Sbjct: 61  IITRNDDRALELIRHDAAHVMAEAVQELWPGTQVTIGPVIENGFYYDFAKNEPFTPDDLP 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEKKM+EII R+ PF +Q  S EKA+++F  K E YKVE++++IP  +++ +Y QG+WF
Sbjct: 121 VIEKKMREIIQRNKPFTRQIWSREKAKQVFADKGERYKVELVDAIPEGQDLKIYYQGDWF 180

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ STGQ+   FKLMKVAGAYWRGDSN PML+RIYGTA+  Q +L  YL+ L E
Sbjct: 181 DLCRGPHMASTGQIGTAFKLMKVAGAYWRGDSNNPMLTRIYGTAFAEQADLDNYLHILAE 240

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVL 300
           +EKRDHR+L REMDLFH  E+G GV+FWH KGW+IFQTL+SYMRR+++ DY+E+N PQVL
Sbjct: 241 AEKRDHRRLGREMDLFHFQEEGPGVVFWHGKGWRIFQTLVSYMRRRLEGDYQEVNAPQVL 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D+ LW+ SGHW  YR NMF V  A D   D R FALKPMNCPGH+ +F HGLKSYRELP+
Sbjct: 301 DKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHIQIFKHGLKSYRELPI 360

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLAEFG+V+R EPSG+LHGLMRVRGFTQDDAH+FCT EQM  ECLKI++LI+S+Y+DFGF
Sbjct: 361 RLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTDEQMAAECLKINDLILSVYEDFGF 420

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           E+++VKLSTRPEKRVG DALWD AE++M  VL TI+  S  RI TG+L GEGAFYGPKFE
Sbjct: 421 EEVVVKLSTRPEKRVGDDALWDRAESVMMEVLKTIEAQSGGRIKTGILPGEGAFYGPKFE 480

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           Y LKDAIGR+WQCGT QVDFNLP RF AFY++ HSEK  PVMIHRA+ GS+ERF+GI+IE
Sbjct: 481 YTLKDAIGREWQCGTTQVDFNLPERFGAFYIDQHSEKTQPVMIHRAICGSMERFLGILIE 540

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           NF G++PLW+SP+Q +V TITS A  Y +E+A  L+   L++ETDFRNE INYKIREHS+
Sbjct: 541 NFAGHMPLWVSPLQVVVATITSEADGYGEEVAEALRDAGLTVETDFRNEKINYKIREHSV 600

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
            K+P+II+CG KEA ERS+ IRR GS     +SL +AI  L+ E+ PPD  +
Sbjct: 601 TKVPVIIVCGKKEAEERSVNIRRLGSQAQTAMSLDEAIASLSLEATPPDVLR 652


>gi|190891876|ref|YP_001978418.1| threonyl-tRNA synthetase [Rhizobium etli CIAT 652]
 gi|238692487|sp|B3PNV4|SYT_RHIE6 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|190697155|gb|ACE91240.1| threonyl-tRNA synthetase protein [Rhizobium etli CIAT 652]
          Length = 668

 Score =  757 bits (1954), Expect = 0.0,   Method: Composition-based stats.
 Identities = 431/658 (65%), Positives = 525/658 (79%), Gaps = 6/658 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIE 60
           M   I LTFPDGS+++FP  ATG DVAESIS+SLAK AVA+AI+G V DLSD V +G IE
Sbjct: 1   MSQAISLTFPDGSVRSFPAGATGKDVAESISKSLAKSAVAIAIDGAVRDLSDAVTDGKIE 60

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           IIT +D R+L +IRH  AH+MAEAVQ +WP  QV IGP+IE+GFYYDF K +PF+ D+L 
Sbjct: 61  IITRKDGRALELIRHDAAHVMAEAVQELWPGTQVTIGPVIENGFYYDFAKNEPFTPDDLP 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IEKKM+EIIAR++PF KQ  S EKA+E+F +K E YKVE++++IP  +++ +Y QG+WF
Sbjct: 121 KIEKKMKEIIARNAPFTKQIWSREKAKEVFAAKGEQYKVELVDAIPEGQDLKIYHQGDWF 180

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ STGQV   FKLMKVAGAYWRGDSN  MLSRIYGTAW  Q +L  YL+ L E
Sbjct: 181 DLCRGPHMASTGQVGTAFKLMKVAGAYWRGDSNNAMLSRIYGTAWADQADLDNYLHMLAE 240

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVL 300
           +EKRDHRKL REMDLFH  E+G GV+FWH KGW+IFQTL++YMRR++  DY+E+N PQVL
Sbjct: 241 AEKRDHRKLGREMDLFHFQEEGPGVVFWHGKGWRIFQTLVAYMRRRLAADYQEVNAPQVL 300

Query: 301 DQHLWQQSGHWDSYRANMFAVK------CADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
           D  LW+ SGHW  Y+ NMFAVK        +D   D R FALKPMNCPGHV +F HGLKS
Sbjct: 301 DTSLWETSGHWGWYQENMFAVKSAHAMTHPEDKEADNRVFALKPMNCPGHVQIFKHGLKS 360

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YRELP+RLAEFG V+R EPSG+LHGLMRVRGFTQDDAH+FCT EQM  ECLKI++LI+S+
Sbjct: 361 YRELPIRLAEFGLVHRYEPSGALHGLMRVRGFTQDDAHIFCTDEQMAAECLKINDLILSV 420

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           Y+DFGF++I+VKLSTRPEKRVGSDALWD AE +M  VL TI+  S+ RI TG+L GEGAF
Sbjct: 421 YEDFGFKEIVVKLSTRPEKRVGSDALWDRAEAVMTDVLKTIEAQSEGRIKTGILPGEGAF 480

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPKFEY LKDAIGR+WQCGT QVDFNLP RF AFY++S+SEK  PVMIHRA+ GS+ERF
Sbjct: 481 YGPKFEYTLKDAIGREWQCGTTQVDFNLPERFGAFYIDSNSEKTQPVMIHRAICGSMERF 540

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
           +GI+IENF G++PLW+SP+Q +V TITS A  Y  E+A  L+   L++ETDFRNE INYK
Sbjct: 541 LGILIENFAGHMPLWVSPLQVVVATITSEADAYGLEVAEALRDAGLNVETDFRNEKINYK 600

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           IREHS+ K+P+II+CG KEA ER++ IRR GS     + L  A+  LT E+ PPD ++
Sbjct: 601 IREHSVTKVPVIIVCGRKEAEERTVNIRRLGSQDQVSMGLDAAVESLTLEATPPDIRR 658


>gi|307321522|ref|ZP_07600917.1| threonyl-tRNA synthetase [Sinorhizobium meliloti AK83]
 gi|306892829|gb|EFN23620.1| threonyl-tRNA synthetase [Sinorhizobium meliloti AK83]
          Length = 660

 Score =  756 bits (1951), Expect = 0.0,   Method: Composition-based stats.
 Identities = 419/652 (64%), Positives = 530/652 (81%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIE 60
           M   + LTFPDGS++ F    TG DVAESIS+SLAKKAVA+AI+G++ DLSD V EG IE
Sbjct: 1   MSHSVSLTFPDGSVREFAAGTTGRDVAESISKSLAKKAVAIAISGELRDLSDAVTEGRIE 60

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           I+T ED R+L +IRH  AH+MAEAVQ +WP  QV IGP+I++GFYYDF K +PF+ D+L 
Sbjct: 61  IVTREDKRALELIRHDAAHVMAEAVQELWPGTQVTIGPVIDNGFYYDFAKNEPFTPDDLP 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEKKM+EIIAR+ PF K+  S ++A+E+F +K E YKVE++++IP  +++ +Y QG+WF
Sbjct: 121 VIEKKMREIIARNKPFTKEVWSRDRAKEVFAAKGENYKVELVDAIPEGQDLKIYYQGDWF 180

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ STGQ+   FKLMKVAGAYWRGDSN PML+RIYGTAW+TQ+EL QYL+ L E
Sbjct: 181 DLCRGPHMASTGQIGTAFKLMKVAGAYWRGDSNNPMLTRIYGTAWHTQEELDQYLHVLAE 240

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVL 300
           +EKRDHR+L REMDLFH  E+G GV+FWH KGW+IFQ+L++YMRR+++ DY+E+N PQVL
Sbjct: 241 AEKRDHRRLGREMDLFHFQEEGPGVVFWHGKGWRIFQSLVAYMRRRLEGDYQEVNAPQVL 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D+ LW+ SGHW  YR NMF V  A D   D R FALKPMNCPGH+ +F HGLKSYRELPV
Sbjct: 301 DKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHIQIFKHGLKSYRELPV 360

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLAEFG+V+R EPSG+LHGLMRVRGFTQDDAH+FCT EQM  ECLKI++LI+S+Y+DFGF
Sbjct: 361 RLAEFGAVHRYEPSGALHGLMRVRGFTQDDAHIFCTDEQMAAECLKINDLILSVYEDFGF 420

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           ++I+VKLSTRPEKRVGSD LWD AE +M  VL TI+  S+ RI TG+L GEGAFYGPKFE
Sbjct: 421 KEIVVKLSTRPEKRVGSDELWDRAEAVMTEVLQTIEEQSEGRIKTGILPGEGAFYGPKFE 480

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           Y LKDAIGR+WQCGT QVDFNLP RF AFY++S SEK  PVMIHRA+ GS+ERF+GI++E
Sbjct: 481 YTLKDAIGREWQCGTTQVDFNLPERFGAFYIDSESEKRQPVMIHRAICGSMERFLGILLE 540

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           N+ G++PLW+SP+Q +V TITS A +Y +E+A  L+   L++ETDFRNE INYK+REHS+
Sbjct: 541 NYAGHMPLWISPLQVVVATITSEADDYGREVAERLRDAGLTVETDFRNEKINYKVREHSV 600

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
            K+P+I++CG +EA ERS+ IRR GS     +SL +A+  L+ E++ PD ++
Sbjct: 601 TKVPVIVVCGRREAEERSVNIRRLGSQAQTAMSLDEAVASLSAEAMAPDLKR 652


>gi|307309192|ref|ZP_07588863.1| threonyl-tRNA synthetase [Sinorhizobium meliloti BL225C]
 gi|306900338|gb|EFN30954.1| threonyl-tRNA synthetase [Sinorhizobium meliloti BL225C]
          Length = 660

 Score =  755 bits (1950), Expect = 0.0,   Method: Composition-based stats.
 Identities = 418/652 (64%), Positives = 529/652 (81%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIE 60
           M   + LTFPDGS++ F    TG DVAESIS+SLAKKAVA+AI+G++ DLSD V EG IE
Sbjct: 1   MSHSVSLTFPDGSVREFAAGTTGRDVAESISKSLAKKAVAIAISGELRDLSDAVTEGRIE 60

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           I+T ED R+L +IRH  AH+MAEAVQ +WP  QV IGP+I++GFYYDF K +PF+ D+L 
Sbjct: 61  IVTREDKRALELIRHDAAHVMAEAVQELWPGTQVTIGPVIDNGFYYDFAKNEPFTPDDLP 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEKKM+EIIAR+ PF K+  S ++A+E+F +K E YKVE++++IP  +++ +Y QG+WF
Sbjct: 121 VIEKKMREIIARNKPFTKEVWSRDRAKEVFAAKGENYKVELVDAIPEGQDLKIYYQGDWF 180

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ STGQ+   FKLMKVAGAYWRGDSN  ML+RIYGTAW+TQ+EL QYL+ L E
Sbjct: 181 DLCRGPHMASTGQIGTAFKLMKVAGAYWRGDSNNTMLTRIYGTAWHTQEELDQYLHVLAE 240

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVL 300
           +EKRDHR+L REMDLFH  E+G GV+FWH KGW+IFQ+L++YMRR+++ DY+E+N PQVL
Sbjct: 241 AEKRDHRRLGREMDLFHFQEEGPGVVFWHGKGWRIFQSLVAYMRRRLEGDYQEVNAPQVL 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D+ LW+ SGHW  YR NMF V  A D   D R FALKPMNCPGH+ +F HGLKSYRELPV
Sbjct: 301 DKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHIQIFKHGLKSYRELPV 360

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLAEFG+V+R EPSG+LHGLMRVRGFTQDDAH+FCT EQM  ECLKI++LI+S+Y+DFGF
Sbjct: 361 RLAEFGAVHRYEPSGALHGLMRVRGFTQDDAHIFCTDEQMAAECLKINDLILSVYEDFGF 420

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           ++I+VKLSTRPEKRVGSD LWD AE +M  VL TI+  S+ RI TG+L GEGAFYGPKFE
Sbjct: 421 KEIVVKLSTRPEKRVGSDELWDRAEAVMTEVLQTIEEQSEGRIKTGILPGEGAFYGPKFE 480

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           Y LKDAIGR+WQCGT QVDFNLP RF AFY++S SEK  PVMIHRA+ GS+ERF+GI++E
Sbjct: 481 YTLKDAIGREWQCGTTQVDFNLPERFGAFYIDSESEKRQPVMIHRAICGSMERFLGILLE 540

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           N+ G++PLW+SP+Q +V TITS A +Y +E+A  L+   L++ETDFRNE INYK+REHS+
Sbjct: 541 NYAGHMPLWISPLQVVVATITSEADDYGREVAERLRDAGLTVETDFRNEKINYKVREHSV 600

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
            K+P+I++CG +EA ERS+ IRR GS     +SL +A+  L+ E++ PD ++
Sbjct: 601 TKVPVIVVCGRREAEERSVNIRRLGSQAQTAMSLDEAVASLSAEAMAPDLKR 652


>gi|325293128|ref|YP_004278992.1| Threonyl-tRNA synthetase [Agrobacterium sp. H13-3]
 gi|325060981|gb|ADY64672.1| Threonyl-tRNA synthetase [Agrobacterium sp. H13-3]
          Length = 667

 Score =  755 bits (1950), Expect = 0.0,   Method: Composition-based stats.
 Identities = 416/658 (63%), Positives = 526/658 (79%), Gaps = 6/658 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIE 60
           M   + LTFPDGS++++P   TG +VAESIS+SLAKKAVA+A++G V DLS+ + +G IE
Sbjct: 1   MSQTVSLTFPDGSVRSYPAGTTGREVAESISKSLAKKAVAIALDGTVRDLSEAITDGKIE 60

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           I+T ED R+L +IRH  AH+MAEAVQ +WP  QV IGP+IE+GFYYDF K +PF+ ++L 
Sbjct: 61  IVTREDSRALELIRHDAAHVMAEAVQELWPGTQVTIGPVIENGFYYDFAKNEPFTPEDLP 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IEK+M+EII R+ PF ++  S EKA+E+F +K E YKVE++++IP  +++ +Y QG+WF
Sbjct: 121 KIEKRMKEIIQRNKPFTREVWSREKAKEVFAAKGENYKVELVDAIPEGQDLKIYYQGDWF 180

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ STGQV   FKLMKVAGAYWRGDSN  MLSRIYGTAW TQ+EL  YL+ L E
Sbjct: 181 DLCRGPHMASTGQVGTAFKLMKVAGAYWRGDSNNAMLSRIYGTAWATQEELDNYLHVLAE 240

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVL 300
           +EKRDHR+L REMDLFH  E+G GV+FWH KGW++FQTL +YMRR++ + Y+E+N PQVL
Sbjct: 241 AEKRDHRRLGREMDLFHFQEEGPGVVFWHGKGWRMFQTLTAYMRRRLANTYQEVNAPQVL 300

Query: 301 DQHLWQQSGHWDSYRANMFAVK------CADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
           D+ LW+ SGHW  Y+ NMFAVK        DD   D R FALKPMNCPGHV +F HGLKS
Sbjct: 301 DKSLWETSGHWGWYQENMFAVKSAHAFTHPDDEDADQRVFALKPMNCPGHVQIFKHGLKS 360

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YRE+PVRLAEFG+V+R E SG+LHGLMRVRGFTQDDAHVFCT+EQM  ECL+I++LI+S+
Sbjct: 361 YREMPVRLAEFGNVHRYEASGALHGLMRVRGFTQDDAHVFCTEEQMAAECLRINDLILSV 420

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           Y+DFGF +I+VKLSTRPEKRVGSD LWD AE++M  VL TI+  S  RI TG+L GEGAF
Sbjct: 421 YEDFGFSEIVVKLSTRPEKRVGSDDLWDRAESVMMEVLKTIEEQSGGRIKTGILPGEGAF 480

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPKFEY LKDAIGR+WQCGT QVDFNLP RF AFY++ +SEK  PVMIHRA+ GS+ERF
Sbjct: 481 YGPKFEYTLKDAIGREWQCGTTQVDFNLPERFGAFYIDQNSEKTQPVMIHRAICGSMERF 540

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
           +GI+IENF G++PLW +P+Q +V TITS A +Y +E+A  L+   +++ETDFRNE INYK
Sbjct: 541 LGILIENFAGHMPLWFAPLQVVVATITSDADDYGREVAEALREAGMAVETDFRNEKINYK 600

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           +REHS+ K+P+II+CG KEA ER++ IRR GS     +SL DAI  L +E+ PPD ++
Sbjct: 601 VREHSVTKVPVIIVCGRKEAEERTVNIRRLGSQNQTPMSLEDAITSLVEEATPPDVKR 658


>gi|15965178|ref|NP_385531.1| threonyl-tRNA synthetase [Sinorhizobium meliloti 1021]
 gi|22654127|sp|Q92QB0|SYT_RHIME RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|15074358|emb|CAC46004.1| Probable threonyl-tRNA synthetase [Sinorhizobium meliloti 1021]
          Length = 661

 Score =  755 bits (1949), Expect = 0.0,   Method: Composition-based stats.
 Identities = 419/652 (64%), Positives = 530/652 (81%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIE 60
           M   + LTFPDGS++ F    TG DVAESIS+SLAKKAVA+AI+G++ DLSD V EG IE
Sbjct: 2   MSHSVSLTFPDGSVREFAAGTTGRDVAESISKSLAKKAVAIAISGELRDLSDAVTEGRIE 61

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           I+T ED R+L +IRH  AH+MAEAVQ +WP  QV IGP+I++GFYYDF K +PF+ D+L 
Sbjct: 62  IVTREDKRALELIRHDAAHVMAEAVQELWPGTQVTIGPVIDNGFYYDFAKNEPFTPDDLP 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEKKM+EIIAR+ PF K+  S ++A+E+F +K E YKVE++++IP  +++ +Y QG+WF
Sbjct: 122 VIEKKMREIIARNKPFTKEVWSRDRAKEVFAAKGENYKVELVDAIPEGQDLKIYYQGDWF 181

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ STGQ+   FKLMKVAGAYWRGDSN PML+RIYGTAW+TQ+EL QYL+ L E
Sbjct: 182 DLCRGPHMASTGQIGTAFKLMKVAGAYWRGDSNNPMLTRIYGTAWHTQEELDQYLHVLAE 241

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVL 300
           +EKRDHR+L REMDLFH  E+G GV+FWH KGW+IFQ+L++YMRR+++ DY+E+N PQVL
Sbjct: 242 AEKRDHRRLGREMDLFHFQEEGPGVVFWHGKGWRIFQSLVAYMRRRLEGDYQEVNAPQVL 301

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D+ LW+ SGHW  YR NMF V  A D   D R FALKPMNCPGH+ +F HGLKSYRELPV
Sbjct: 302 DKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHIQIFKHGLKSYRELPV 361

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLAEFG+V+R EPSG+LHGLMRVRGFTQDDAH+FCT EQM  ECLKI++LI+S+Y+DFGF
Sbjct: 362 RLAEFGAVHRYEPSGALHGLMRVRGFTQDDAHIFCTDEQMAAECLKINDLILSVYEDFGF 421

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           ++I+VKLSTRPEKRVGSD LWD AE +M  VL TI+  S+ RI TG+L GEGAFYGPKFE
Sbjct: 422 KEIVVKLSTRPEKRVGSDELWDRAEAVMTEVLQTIEEQSEGRIKTGILPGEGAFYGPKFE 481

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           Y LKDAIGR+WQCGT QVDFNLP RF AFY++S SEK  PVMIHRA+ GS+ERF+GI++E
Sbjct: 482 YTLKDAIGREWQCGTTQVDFNLPERFGAFYIDSESEKRQPVMIHRAICGSMERFLGILLE 541

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           N+ G++PLW+SP+Q +V TITS A +Y +E+A  L+   L++ETDFRNE INYK+REHS+
Sbjct: 542 NYAGHMPLWISPLQVVVATITSEADDYGREVAERLRDAGLTVETDFRNEKINYKVREHSV 601

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
            K+P+I++CG +EA ERS+ IRR GS     +SL +A+  L+ E++ PD ++
Sbjct: 602 TKVPVIVVCGRREAEERSVNIRRLGSQAQTAMSLDEAVASLSAEAMAPDLKR 653


>gi|86357812|ref|YP_469704.1| threonyl-tRNA synthetase [Rhizobium etli CFN 42]
 gi|123765783|sp|Q2K859|SYT_RHIEC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|86281914|gb|ABC90977.1| threonyl-tRNA synthetase protein [Rhizobium etli CFN 42]
          Length = 668

 Score =  755 bits (1948), Expect = 0.0,   Method: Composition-based stats.
 Identities = 429/658 (65%), Positives = 523/658 (79%), Gaps = 6/658 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIE 60
           M   + LTFPDGS+++FP  ATG DVAESIS+SLAK AVA+AI+G V DLSD V +G IE
Sbjct: 1   MSQSVSLTFPDGSVRSFPAGATGRDVAESISKSLAKSAVAIAIDGGVRDLSDAVTDGKIE 60

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           IIT +DPR+L +IRH  AH+MAEAVQ +WP  QV IGP+IE+GFYYDF K +PF+ D+L 
Sbjct: 61  IITRKDPRALELIRHDAAHVMAEAVQELWPGTQVTIGPVIENGFYYDFAKNEPFTPDDLP 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IEKKM+EIIAR++PF KQ  S EKA+E+F +K E YKVE++++IP  +++ +Y QGEWF
Sbjct: 121 KIEKKMKEIIARNAPFTKQIWSREKAKEVFAAKGEQYKVELVDAIPEGQDLKIYHQGEWF 180

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ STGQV   FKLMKVAGAYWRGDSN  MLSRIYGTAW  Q +L  YL+ L E
Sbjct: 181 DLCRGPHMASTGQVGTAFKLMKVAGAYWRGDSNNAMLSRIYGTAWADQADLDNYLHMLAE 240

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVL 300
           +EKRDHRKL REMDLFH  E+G GV+FWH KGW+IFQTL++YMRR++  DYEE+N PQVL
Sbjct: 241 AEKRDHRKLGREMDLFHFQEEGPGVVFWHGKGWRIFQTLVAYMRRRLAIDYEEVNAPQVL 300

Query: 301 DQHLWQQSGHWDSYRANM------FAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
           D  LW+ SGHW  Y+ NM       A+   DD   D R FALKPMNCPGHV +F HGLKS
Sbjct: 301 DTSLWETSGHWGWYQENMFGVKSAHAMTHPDDKEADNRVFALKPMNCPGHVQIFKHGLKS 360

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YRELP+RLAEFG V+R EPSG+LHGLMRVRGFTQDDAH+FCT EQM  ECLKI++LI+S+
Sbjct: 361 YRELPIRLAEFGLVHRYEPSGALHGLMRVRGFTQDDAHIFCTDEQMAAECLKINDLILSV 420

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           Y+DFGF++I+VKLSTRPEKRVGSDALWD AE +M  VL TI+  S+ RI TG+L GEGAF
Sbjct: 421 YEDFGFKEIVVKLSTRPEKRVGSDALWDRAEAVMTDVLKTIEAQSEGRIKTGILPGEGAF 480

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPKFEY LKDAIGR+WQCGT QVDFNLP RF AFY++S+SEK  PVMIHRA+ GS+ERF
Sbjct: 481 YGPKFEYTLKDAIGREWQCGTTQVDFNLPERFGAFYIDSNSEKTQPVMIHRAICGSMERF 540

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
           +GI+IENF G++PLW+SP+Q +V TITS A  Y  E+A  L+   L++ETDFRNE INYK
Sbjct: 541 LGILIENFAGHMPLWVSPLQVVVATITSEADAYGLEVAEALREAGLNVETDFRNEKINYK 600

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           IREHS+ K+P+II+CG KEA +R++ IRR GS     + L  A+  L  E+ PPD ++
Sbjct: 601 IREHSVTKVPVIIVCGRKEAEDRTVNIRRLGSQDQVSMGLDTAVESLALEATPPDVRR 658


>gi|15889049|ref|NP_354730.1| threonyl-tRNA synthetase [Agrobacterium tumefaciens str. C58]
 gi|22654115|sp|Q8UEL1|SYT_AGRT5 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|15156846|gb|AAK87515.1| threonyl-tRNA synthetase [Agrobacterium tumefaciens str. C58]
          Length = 667

 Score =  755 bits (1948), Expect = 0.0,   Method: Composition-based stats.
 Identities = 415/658 (63%), Positives = 525/658 (79%), Gaps = 6/658 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIE 60
           M   I LTFPDGS++++P   TG +VAESIS+SLAKKAVA+A++G V DLS+ + +G IE
Sbjct: 1   MSEAISLTFPDGSVRSYPAGTTGREVAESISKSLAKKAVAIALDGTVRDLSETITDGKIE 60

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           I+T ED R+L +IRH  AH+MAEAVQ +WP  QV IGP+IE+GFYYDF K +PF+ ++L 
Sbjct: 61  IVTREDGRALELIRHDAAHVMAEAVQELWPGTQVTIGPVIENGFYYDFAKNEPFTPEDLP 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IEK+M+EII R+ PF ++  S EKA+E+F +K E YKVE++++IP  +++ +Y QG+WF
Sbjct: 121 KIEKRMKEIIQRNKPFTREIWSREKAKEVFAAKGENYKVELVDAIPEGQDLKIYYQGDWF 180

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ STGQ+   FKLMKVAGAYWRGDSN  MLSRIYGTAW TQ+EL  YL+ L E
Sbjct: 181 DLCRGPHMASTGQIGTAFKLMKVAGAYWRGDSNNAMLSRIYGTAWATQEELDNYLHVLAE 240

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVL 300
           +EKRDHR+L REMDLFH  E+G GV+FWH KGW++FQTL +YMRR++ + Y+E+N PQVL
Sbjct: 241 AEKRDHRRLGREMDLFHFQEEGPGVVFWHGKGWRMFQTLTAYMRRRLANTYQEVNAPQVL 300

Query: 301 DQHLWQQSGHWDSYRANMFAVK------CADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
           D+ LW+ SGHW  Y+ NMFAVK        DD   D R FALKPMNCPGHV +F HGLKS
Sbjct: 301 DKSLWETSGHWGWYQENMFAVKSAHAFTHPDDKEADQRVFALKPMNCPGHVQIFKHGLKS 360

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YRE+PVRLAEFG+V+R E SG+LHGLMRVRGFTQDDAHVFCT+EQM  ECL+I++LI+S+
Sbjct: 361 YREMPVRLAEFGNVHRYEASGALHGLMRVRGFTQDDAHVFCTEEQMAAECLRINDLILSV 420

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           Y+DFGF +I+VKLSTRPEKRVGSD LWD AE++M  VL TI+  S  RI TG+L GEGAF
Sbjct: 421 YEDFGFSEIVVKLSTRPEKRVGSDDLWDRAESVMLEVLKTIEEQSGGRIKTGILPGEGAF 480

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPKFEY LKDAIGR+WQCGT QVDFNLP RF AFY++ +SEK  PVMIHRA+ GS+ERF
Sbjct: 481 YGPKFEYTLKDAIGREWQCGTTQVDFNLPERFGAFYIDQNSEKTQPVMIHRAICGSMERF 540

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
           +GI+IENF G++PLW +P+Q +V TITS A +Y +E+A  L+   +++ETDFRNE INYK
Sbjct: 541 LGILIENFAGHMPLWFAPLQVVVATITSDADDYGREVAEALREAGMAVETDFRNEKINYK 600

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           +REHS+ K+P+II+CG KEA ER++ IRR GS     +SL +AI  L  E+ PPD ++
Sbjct: 601 VREHSVTKVPVIIVCGRKEAEERTVNIRRLGSQNQTSMSLEEAITSLVDEATPPDVKR 658


>gi|154245583|ref|YP_001416541.1| threonyl-tRNA synthetase [Xanthobacter autotrophicus Py2]
 gi|154159668|gb|ABS66884.1| threonyl-tRNA synthetase [Xanthobacter autotrophicus Py2]
          Length = 660

 Score =  753 bits (1945), Expect = 0.0,   Method: Composition-based stats.
 Identities = 397/650 (61%), Positives = 515/650 (79%), Gaps = 1/650 (0%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            I LTFPDG+ +++    +G+D+A +IS+SLAKKAVAV ++G + DLS+P+  +  +EI+
Sbjct: 1   MISLTFPDGAKRDYAEGTSGADIAAAISKSLAKKAVAVTLDGALTDLSEPITRDAKLEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +DPR+L +IRH C+H+MAEAVQ +WP  QV IGP+IE+GFYYDF +  PF++++L  I
Sbjct: 61  TRDDPRALELIRHDCSHVMAEAVQELWPGTQVTIGPVIENGFYYDFARNAPFTTEDLPVI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E KM+EIIARD PF K+  + ++A+ +F +K E YKVE++++IP+ ++V +Y+QGEWFDL
Sbjct: 121 ENKMREIIARDRPFTKEVWTRDEAKRVFAAKGEGYKVELVDAIPSDQDVKIYKQGEWFDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ STG++   FKLMKVAGAYWRGDSN PML+RIYGTAW  ++EL  Y++ LEE+E
Sbjct: 181 CRGPHMPSTGKIGTAFKLMKVAGAYWRGDSNNPMLTRIYGTAWQDEKELNAYIHRLEEAE 240

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQ 302
           KRDHR+L REMDLFH  E+G G +FWH KGW +FQ L++YMRR++K DY E+N PQVLD 
Sbjct: 241 KRDHRRLGREMDLFHFQEEGPGTVFWHPKGWTLFQELVAYMRRRLKADYNEVNAPQVLDA 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW  Y+ NMF V+ A D  KD R FALKPMNCPGHV +F HGLKSYR+LP+RL
Sbjct: 301 GLWETSGHWGWYKENMFKVQSAGDETKDERVFALKPMNCPGHVQIFKHGLKSYRDLPLRL 360

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFG+V+R EPSG+LHGLMRVRGFTQDDAHVFCT+EQM  ECLKI++LI+S Y DFGF++
Sbjct: 361 AEFGAVHRYEPSGALHGLMRVRGFTQDDAHVFCTEEQMAAECLKINDLILSTYADFGFDE 420

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+VKLSTRPEKRVGSDA+WD AE +M  VL  I+ +S  RI TG+L GEGAFYGPKFEY 
Sbjct: 421 IVVKLSTRPEKRVGSDAVWDHAEEVMTRVLAEIEAASGGRIKTGILPGEGAFYGPKFEYT 480

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LKDAIGR+WQCGT QVDFNLP RF AFYV++  +K  PVMIHRA+ GS+ERF GI+IE+F
Sbjct: 481 LKDAIGREWQCGTTQVDFNLPERFGAFYVDADGQKKTPVMIHRAICGSMERFTGILIEHF 540

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G+ PLWL+P Q +V TITS A +YA E+A LLK+  L +E D RNE IN K+REHS+ K
Sbjct: 541 AGHFPLWLAPTQVVVATITSDADDYAAEVAELLKAEGLRVELDVRNEKINLKVREHSLAK 600

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           +P++++ G KEA+ER++ IRR GS      +L + +  L  E++PPD ++
Sbjct: 601 VPVLLVAGKKEAAERTLSIRRLGSNAQTGGTLDEVVAALVDEAVPPDLKR 650


>gi|327188321|gb|EGE55539.1| threonyl-tRNA synthetase protein [Rhizobium etli CNPAF512]
          Length = 668

 Score =  753 bits (1943), Expect = 0.0,   Method: Composition-based stats.
 Identities = 431/656 (65%), Positives = 523/656 (79%), Gaps = 6/656 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIE 60
           M   I LTFPDGS+++FP  ATG DVAESIS+SLAK AVA+AI+G V DLSD V +G IE
Sbjct: 1   MSQAISLTFPDGSVRSFPAGATGKDVAESISKSLAKSAVAIAIDGAVRDLSDAVTDGKIE 60

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           IIT +D R+L +IRH  AH+MAEAVQ +WP  QV IGP+IE+GFYYDF K +PF+ D+L 
Sbjct: 61  IITRKDGRALELIRHDAAHVMAEAVQELWPGTQVTIGPVIENGFYYDFAKNEPFTPDDLP 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IEKKM+EIIAR++PF KQ  S EKA+E+F +K E YKVE++++IP  +++ +Y QG+WF
Sbjct: 121 KIEKKMKEIIARNAPFTKQIWSREKAKEVFAAKGEQYKVELVDAIPEGQDLKIYHQGDWF 180

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ STGQV   FKLMKVAGAYWRGDSN  MLSRIYGTAW  Q +L  YL+ L E
Sbjct: 181 DLCRGPHMASTGQVGTAFKLMKVAGAYWRGDSNNAMLSRIYGTAWADQADLDNYLHMLAE 240

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVL 300
           +EKRDHRKL REMDLFH  E+G GV+FWH KGW+IFQTL++YMRR++  DY+E+N PQVL
Sbjct: 241 AEKRDHRKLGREMDLFHFQEEGPGVVFWHGKGWRIFQTLVAYMRRRLAADYQEVNAPQVL 300

Query: 301 DQHLWQQSGHWDSYRANMFAVK------CADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
           D  LW+ SGHW  Y+ NMFAVK        +D   D R FALKPMNCPGHV +F HGLKS
Sbjct: 301 DTSLWETSGHWGWYQENMFAVKSAHAMTHPEDKEADNRVFALKPMNCPGHVQIFKHGLKS 360

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YRELP+RLAEFG V+R EPSG+LHGLMRVRGFTQDDAH+FCT EQM  ECLKI++LI+S+
Sbjct: 361 YRELPIRLAEFGLVHRYEPSGALHGLMRVRGFTQDDAHIFCTDEQMAAECLKINDLILSV 420

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           Y+DFGF++I+VKLSTRPEKRVGSDALWD AE +M  VL TI+  S+ RI TG+L GEGAF
Sbjct: 421 YEDFGFKEIVVKLSTRPEKRVGSDALWDRAEAVMTDVLKTIEAQSEGRIKTGILPGEGAF 480

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPKFEY LKDAIGR+WQCGT QVDFNLP RF AFY++S+SEK  PVMIHRA+ GS+ERF
Sbjct: 481 YGPKFEYTLKDAIGREWQCGTTQVDFNLPERFGAFYIDSNSEKTQPVMIHRAICGSMERF 540

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
           +GI+IENF G++PLW+SP+Q +V TITS A  Y  E+A  L+   L++ETDFRNE INYK
Sbjct: 541 LGILIENFAGHMPLWVSPLQVVVATITSEADAYGLEVAEALRDAGLNVETDFRNEKINYK 600

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDC 650
           IREHS+ K+P+II+CG KEA ER++ IRR GS     + L  A+  LT E+ PPD 
Sbjct: 601 IREHSVTKVPVIIVCGRKEAEERTVNIRRLGSQDQVSMELDAAVESLTLEATPPDI 656


>gi|222148633|ref|YP_002549590.1| threonyl-tRNA synthetase [Agrobacterium vitis S4]
 gi|254783504|sp|B9JWF4|SYT_AGRVS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|221735619|gb|ACM36582.1| threonyl-tRNA synthetase [Agrobacterium vitis S4]
          Length = 666

 Score =  750 bits (1936), Expect = 0.0,   Method: Composition-based stats.
 Identities = 414/658 (62%), Positives = 524/658 (79%), Gaps = 6/658 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIE 60
           M   + LTFPDGS+++F   ATG DVAESIS+SLAKKAVA+A++G V DL+DPV +G IE
Sbjct: 1   MSDTVSLTFPDGSVRSFAAGATGRDVAESISKSLAKKAVAIALDGVVRDLADPVVDGKIE 60

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           I+T  DPR+L +IRH  AH++AEAVQ +WP  QV IGP+IE+GFYYDF K +PF+ ++L 
Sbjct: 61  IVTRADPRALELIRHDTAHVLAEAVQEMWPGTQVTIGPVIENGFYYDFAKNEPFTPEDLP 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IEKKM+EII R+ PF K+  S EKARE+F +K E+YKVE++++IP  +++ +Y QG+WF
Sbjct: 121 KIEKKMKEIIQRNQPFRKEVWSREKAREVFAAKGESYKVELIDAIPEDQDIKIYYQGDWF 180

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           D CRGPH+ STGQ+   FKLMKVAGAYWRGDSN PML+RIYGTA+  Q++L  YL+ L E
Sbjct: 181 DPCRGPHMASTGQIGTAFKLMKVAGAYWRGDSNNPMLTRIYGTAFAEQEQLDNYLHILAE 240

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVL 300
           +EKRDHRKL REMDLFH  E+G GV+FWH KGWK+FQ+L +YMRR++ + Y+E+N PQVL
Sbjct: 241 AEKRDHRKLGREMDLFHFQEEGPGVVFWHGKGWKMFQSLTAYMRRRLANTYQEVNAPQVL 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKCAD------DTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
           D+ LW+ SGHW  Y+ NMFAVK A       D   D R FALKPMNCPGHV +F HGLKS
Sbjct: 301 DKSLWETSGHWGWYQENMFAVKSAHAFTNPNDPEADQRVFALKPMNCPGHVQIFKHGLKS 360

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YRELPVRLAEFG V+R E SG+LHGLMRVRGFTQDDAHVFCT+EQM  ECL+I++LI+S+
Sbjct: 361 YRELPVRLAEFGLVHRYEASGALHGLMRVRGFTQDDAHVFCTEEQMAAECLRINDLILSV 420

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           Y+DFGF++++VKLSTRPEKRVGSD LWD AE++M  VL  I+  S  RI TG+L GEGAF
Sbjct: 421 YEDFGFKEVVVKLSTRPEKRVGSDELWDRAESVMTEVLKAIEEQSGGRIKTGILPGEGAF 480

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPKFEY LKDAIGR+WQCGT QVDFNLP RF AFY++ HSEK  PVMIHRA+ GS+ERF
Sbjct: 481 YGPKFEYTLKDAIGREWQCGTTQVDFNLPERFGAFYIDQHSEKTQPVMIHRAICGSMERF 540

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
           +GI+IENF G++PLW +P+Q +V TITS A +Y +++A  L+   L +ETDFRNE INYK
Sbjct: 541 LGILIENFAGHMPLWFAPLQVVVATITSEADDYGRDVAEQLRDAGLEVETDFRNEKINYK 600

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           +REHS+ K+P+I++CG +EA ER++ IRR GS     ++L +AI  L  E+ PPD ++
Sbjct: 601 VREHSVGKVPVIMVCGKREAEERTVNIRRLGSQDQVSMTLDEAIASLVDEATPPDVKR 658


>gi|316933337|ref|YP_004108319.1| threonyl-tRNA synthetase [Rhodopseudomonas palustris DX-1]
 gi|315601051|gb|ADU43586.1| threonyl-tRNA synthetase [Rhodopseudomonas palustris DX-1]
          Length = 693

 Score =  749 bits (1934), Expect = 0.0,   Method: Composition-based stats.
 Identities = 375/652 (57%), Positives = 500/652 (76%), Gaps = 2/652 (0%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEI 61
             I +TFPDG  + +P   TG D+A+ IS SLAK+ VA+A+NG + DL+DP+ + + I+ 
Sbjct: 31  DQITITFPDGKTREYPRGTTGLDIAKGISPSLAKRTVAMALNGTLTDLADPIEDNTAIDF 90

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +  +D R+L +IRH CAH++AEAVQS+WP  QV IGP+IE+GFYYDF + +PF+ ++ A 
Sbjct: 91  VARDDGRALELIRHDCAHVLAEAVQSLWPGTQVTIGPVIENGFYYDFFRNEPFTPEDFAA 150

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEKKM+EIIARD PF K+  + ++A+++F    EA+KVE++ +IP  + + +Y+QGEWFD
Sbjct: 151 IEKKMREIIARDKPFTKEVWTRDEAKKVFADNGEAFKVELVAAIPEDQTIKIYKQGEWFD 210

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ STG++   FKLMKVAGAYWRGDSN PML+RIYGTAW  Q++L  YL+ +EE+
Sbjct: 211 LCRGPHMTSTGKIGTAFKLMKVAGAYWRGDSNNPMLTRIYGTAWAKQEDLDAYLHQIEEA 270

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLD 301
           EKRDHRKL RE+DLFH  E+G GV+FWH KGW +FQ+L+ YMRR++  DY+E+N PQ+LD
Sbjct: 271 EKRDHRKLGRELDLFHFQEEGPGVVFWHAKGWSLFQSLVGYMRRRLAGDYDEVNAPQILD 330

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW+ YR NMFA + A +  +D R FALKPMNCPGHV +F HGLKSYR+LP+R
Sbjct: 331 KVLWETSGHWEWYRENMFAAQSAGEDAEDKRWFALKPMNCPGHVQIFKHGLKSYRDLPLR 390

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AEFG V+R EPSG++HGLMRVRGFTQDDAHVFCT+ Q+  EC+KI++LI+S Y DFGFE
Sbjct: 391 MAEFGVVHRYEPSGAMHGLMRVRGFTQDDAHVFCTEAQLAEECIKINDLILSTYSDFGFE 450

Query: 422 -KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
            ++ VKLSTRP+KRVG+D +WD AE +M  VL  IK    +RI T +  GEGAFYGPKFE
Sbjct: 451 GELTVKLSTRPDKRVGTDEMWDHAERVMATVLSEIKAKGGNRIKTEINPGEGAFYGPKFE 510

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           Y+L+DAIGRDWQCGT QVDFNLP RF AFY+++   K  PVM+HRA+ GS+ERF GI+IE
Sbjct: 511 YVLRDAIGRDWQCGTTQVDFNLPERFGAFYIDADGAKKAPVMVHRAICGSMERFTGILIE 570

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           ++ GN PLWL+P+Q +VTTITS   EYA+++   L+   L  + D RNE IN+K+REHS+
Sbjct: 571 HYAGNFPLWLAPVQVVVTTITSEGDEYAKKVLAALRKAGLRADIDLRNEKINFKVREHSL 630

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
            K+P +++ G KEA   S+ +RR GS   + +   +AI  L  E+ PPD ++
Sbjct: 631 AKVPALLVVGKKEAETHSVSVRRLGSDGQKVMPTDEAIAALVDEATPPDVRR 682


>gi|241204765|ref|YP_002975861.1| threonyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240858655|gb|ACS56322.1| threonyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 661

 Score =  749 bits (1933), Expect = 0.0,   Method: Composition-based stats.
 Identities = 422/652 (64%), Positives = 521/652 (79%), Gaps = 1/652 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIE 60
           M   I LTFPDGS++ +   ATG DVAESIS+SLAKKAVAVAI+G V DLSDPV  G IE
Sbjct: 1   MSQAISLTFPDGSVRGYDAGATGRDVAESISKSLAKKAVAVAIDGTVRDLSDPVTTGRIE 60

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           IIT  D R+L +IRH  AH+MAEAVQ IWP  QV IGP+IE+GFYYDF K +PF+ D+L 
Sbjct: 61  IITRNDDRALELIRHDAAHVMAEAVQEIWPGTQVTIGPVIENGFYYDFAKNEPFTLDDLP 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IEKKM+EIIAR++ F KQ  S EKA+++F  K E YKVE++++IP  +++ +Y QG+WF
Sbjct: 121 KIEKKMKEIIARNAAFTKQVWSREKAKQVFADKGEQYKVELVDAIPEGQDLKIYYQGDWF 180

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ STGQ+   FKL+KVAGAYWRGDSN PMLSRIYGTA+  Q EL  YL+ L E
Sbjct: 181 DLCRGPHMASTGQIGSAFKLLKVAGAYWRGDSNNPMLSRIYGTAFAEQSELDNYLHMLAE 240

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVL 300
           +EKRDHR+L REMDLFH  E+G GV+FWH KGW++FQTL++YMRR++  DY+E+N PQVL
Sbjct: 241 AEKRDHRRLGREMDLFHFQEEGPGVVFWHGKGWRVFQTLVAYMRRRLAGDYQEVNAPQVL 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D+ LW+ SGHW  YR NMF V  A D   D R FALKPMNCPGH+ +F HGLKSYRELP+
Sbjct: 301 DKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHIQIFKHGLKSYRELPI 360

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLAEFG+V+R EPSG+LHGLMRVRGFTQDDAH+FCT EQM  ECLKI++LI+S+YKDFGF
Sbjct: 361 RLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTDEQMAAECLKINDLILSVYKDFGF 420

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           +++ +KLSTRP+KRVGSD LWD AE++M GVL+TI+  S + I TG+L GEGAFYGPKFE
Sbjct: 421 DEVTIKLSTRPDKRVGSDDLWDRAESVMMGVLETIQQQS-NNIKTGILPGEGAFYGPKFE 479

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           Y LKDAIGR+WQCGT QVDFNLP RF AFY++S+SEK  PVMIHRA+ GS+ERF+GI+IE
Sbjct: 480 YTLKDAIGREWQCGTTQVDFNLPERFGAFYIDSNSEKTQPVMIHRAICGSMERFLGILIE 539

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           NF G++PLW+SP+Q +V TITS A  Y  E+A  L+   L++ETDFRNE INYK+REHS+
Sbjct: 540 NFAGHMPLWVSPLQVVVATITSEADAYGLEVAEALREAGLNVETDFRNEKINYKVREHSV 599

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
            K+P+II+CG KEA ER++ IRR GS     + L  A+  L  E+ PPD ++
Sbjct: 600 TKVPVIIVCGRKEAEERTVNIRRLGSQDQVSMGLDAAVESLALEATPPDIRR 651


>gi|192292254|ref|YP_001992859.1| threonyl-tRNA synthetase [Rhodopseudomonas palustris TIE-1]
 gi|192286003|gb|ACF02384.1| threonyl-tRNA synthetase [Rhodopseudomonas palustris TIE-1]
          Length = 687

 Score =  749 bits (1933), Expect = 0.0,   Method: Composition-based stats.
 Identities = 375/652 (57%), Positives = 497/652 (76%), Gaps = 2/652 (0%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEI 61
             I +TFPDG  + +P   TG D+A+ IS SLAK+ V +A+NG + DL+DP+ +   I+ 
Sbjct: 31  DQITITFPDGKTREYPRGTTGLDIAKGISPSLAKRTVVMALNGTLTDLADPIEDNAQIDF 90

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +  +D R+L +IRH CAH++AEAVQS+WP  QV IGP IE+GFYYDF + +PF+ ++ A 
Sbjct: 91  VARDDARALELIRHDCAHVLAEAVQSLWPGTQVTIGPTIENGFYYDFFRNEPFTPEDFAA 150

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEKKM+EIIARD PF K+  + ++A+++F    EA+KVE++++IP  + + +Y+QGEWFD
Sbjct: 151 IEKKMREIIARDKPFTKEVWTRDEAKKVFADNGEAFKVELVDAIPEDQTIKIYKQGEWFD 210

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ STG++   FKLMKVAGAYWRGDSN PML+RIYGTA+  Q +L  YL+ +EE+
Sbjct: 211 LCRGPHMTSTGKIGTAFKLMKVAGAYWRGDSNNPMLTRIYGTAFAKQDDLDAYLHQIEEA 270

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLD 301
           EKRDHRKL RE+DLFH  E+G GV+FWH KGW +FQ+L+ YMRR++  DY+E+N PQ+LD
Sbjct: 271 EKRDHRKLGRELDLFHFQEEGPGVVFWHAKGWSLFQSLVGYMRRRLAGDYDEVNAPQILD 330

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW+ YR NMFA + A D  +D R FALKPMNCPGHV +F HGLKSYR+LP+R
Sbjct: 331 KVLWETSGHWEWYRENMFAAQSAGDDAEDKRWFALKPMNCPGHVQIFKHGLKSYRDLPLR 390

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFG V+R EPSG++HGLMRVRGFTQDDAHVFCT+ Q+  EC+KI++LI+S Y DFGFE
Sbjct: 391 LAEFGVVHRYEPSGAMHGLMRVRGFTQDDAHVFCTEAQLAEECIKINDLILSTYSDFGFE 450

Query: 422 -KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
            ++ VKLSTRPEKRVG+D +WD AE +M  VL  IK    +RI T +  GEGAFYGPKFE
Sbjct: 451 GELTVKLSTRPEKRVGTDEMWDHAERVMATVLSEIKAKGGNRIKTEINPGEGAFYGPKFE 510

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           Y+L+DAIGRDWQCGT QVDFNLP RF AFY+++   K  PVM+HRA+ GS+ERF GI+IE
Sbjct: 511 YVLRDAIGRDWQCGTTQVDFNLPERFGAFYIDADGAKKAPVMVHRAICGSMERFTGILIE 570

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           ++ GN PLWL+P+Q +VTTITS   +YA+++   L+   L  + D RNE IN+K+REHS+
Sbjct: 571 HYAGNFPLWLAPVQVVVTTITSEGDDYAKKVLAALRKAGLRADIDLRNEKINFKVREHSL 630

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
            K+P +++ G KEA   S+ +RR GS   + +   +AI  L  E+ PPD ++
Sbjct: 631 AKVPALLVVGKKEAESHSVSVRRLGSEGQKVMPTDEAIAALVDEATPPDVKR 682


>gi|116252274|ref|YP_768112.1| threonyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae 3841]
 gi|123261550|sp|Q1MGA7|SYT_RHIL3 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|115256922|emb|CAK08016.1| putative threonyl-tRNA synthetase [Rhizobium leguminosarum bv.
           viciae 3841]
          Length = 661

 Score =  747 bits (1929), Expect = 0.0,   Method: Composition-based stats.
 Identities = 419/650 (64%), Positives = 519/650 (79%), Gaps = 1/650 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIE 60
           M   I LTFPDGS++ +   ATG DVAESIS+SLAKKAVAVAI+G V DLSDPV  G IE
Sbjct: 1   MSQAISLTFPDGSVRGYDAGATGRDVAESISKSLAKKAVAVAIDGTVRDLSDPVTTGRIE 60

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           IIT  D R+L +IRH  AH+MAEAVQ +WP  QV IGP+IE+GFYYDF K +PF+ D+L 
Sbjct: 61  IITRNDDRALELIRHDAAHVMAEAVQELWPGTQVTIGPVIENGFYYDFAKNEPFTLDDLP 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IEKKM+EIIAR++ F KQ  S ++A+++F  K E YKVE++++IP  +++ +Y QG+WF
Sbjct: 121 KIEKKMKEIIARNAAFTKQVWSRDRAKQVFADKGEQYKVELVDAIPEGQDLKIYYQGDWF 180

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ STGQ+   FKL+KVAGAYWRGDSN PMLSRIYGTA+  Q EL  YL+ L E
Sbjct: 181 DLCRGPHMASTGQIGSAFKLLKVAGAYWRGDSNNPMLSRIYGTAFAEQSELDNYLHMLAE 240

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVL 300
           +EKRDHR+L REMDLFH  E+G GV+FWH KGW++FQTL++YMRR++  DY+E+N PQVL
Sbjct: 241 AEKRDHRRLGREMDLFHFQEEGPGVVFWHGKGWRVFQTLVAYMRRRLAGDYQEVNAPQVL 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D+ LW+ SGHW  YR +MF V  A D   D R FALKPMNCPGH+ +F HGLKSYRELP+
Sbjct: 301 DKSLWETSGHWGWYRDSMFKVTVAGDDTDDDRVFALKPMNCPGHIQIFKHGLKSYRELPI 360

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLAEFG+V+R EPSG+LHGLMRVRGFTQDDAH+FCT EQM  ECLKI++LI+S+YKDFGF
Sbjct: 361 RLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTDEQMAAECLKINDLILSVYKDFGF 420

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           +++ +KLSTRP+KRVGSD LWD AE++M GVL+TI+  S + I TG+L GEGAFYGPKFE
Sbjct: 421 DEVTIKLSTRPDKRVGSDELWDRAESVMMGVLETIQQQS-NNIKTGILPGEGAFYGPKFE 479

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           Y LKDAIGR+WQCGT QVDFNLP RF AFY++S+SEK  PVMIHRA+ GS+ERF+GI+IE
Sbjct: 480 YTLKDAIGREWQCGTTQVDFNLPERFGAFYIDSNSEKTQPVMIHRAICGSMERFLGILIE 539

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           NF G++PLW+SP+Q +V TITS A  Y  E+A  L+   L++ETDFRNE INYKIREHS+
Sbjct: 540 NFAGHMPLWVSPLQVVVATITSEADAYGLEVAEALREAGLNVETDFRNEKINYKIREHSV 599

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDC 650
            K+P+II+CG KEA ER++ IRR GS     + L  A+  L  E+ PPD 
Sbjct: 600 TKVPVIIVCGRKEAEERTVNIRRLGSQDQVSMGLDAAVESLALEATPPDI 649


>gi|13471046|ref|NP_102615.1| threonyl-tRNA synthetase [Mesorhizobium loti MAFF303099]
 gi|22654133|sp|Q98LR2|SYT_RHILO RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|14021790|dbj|BAB48401.1| threonyl-tRNA synthetase [Mesorhizobium loti MAFF303099]
          Length = 658

 Score =  746 bits (1925), Expect = 0.0,   Method: Composition-based stats.
 Identities = 399/654 (61%), Positives = 511/654 (78%), Gaps = 2/654 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M + + LTFPDGS++++    TG+ +AESIS+SLAKKAVA AING V DLSDP+ + G +
Sbjct: 1   MLNSVSLTFPDGSVRDYDAAMTGAGLAESISKSLAKKAVAYAINGTVRDLSDPLGKSGKV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT +D R+L +IRH  AH++AEAVQ +WP  QV IGP+IE+GFYYDF + +PF+ D+ 
Sbjct: 61  EIITRDDARALELIRHDTAHVLAEAVQELWPGTQVTIGPVIENGFYYDFARNEPFTPDDF 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM+EIIAR+ PF K+  S +KA+++F  K E YK+E++++IP  +++ +Y QG+W
Sbjct: 121 PVIEKKMREIIARNKPFTKEVWSRDKAKKVFADKGERYKLELIDAIPEDQDLKIYAQGDW 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPH+ STGQ+   FKLMKVAGAYWRGDSN PML+RIYGTAW  Q +L  Y   LE
Sbjct: 181 FDLCRGPHMASTGQIGNAFKLMKVAGAYWRGDSNNPMLTRIYGTAWADQAQLEAYQTMLE 240

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+EKRDHRKL REMDLFH  E+G GV+FWH KGWK+FQ L++YMRR++ +  Y+E+N PQ
Sbjct: 241 EAEKRDHRKLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVNYMRRRLDEQGYQEVNAPQ 300

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           VLD+ LW+ SGHW  YR  MF V  A D   D R FALKPMNCPGHV +F HGLKSYR+L
Sbjct: 301 VLDKSLWETSGHWGWYRDAMFKVTVAGDDTDDDRVFALKPMNCPGHVQIFKHGLKSYRDL 360

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           PV+LAEFG+V+R EPSG+LHGLMRVRGFTQDDAH+FCT+EQ+ +ECL+I++LI+S Y DF
Sbjct: 361 PVKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQLASECLRINDLILSTYADF 420

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF++I VKLSTRP+KRVG+D  WD AE IM  VL+TI+  S +RI T +  GEGAFYGPK
Sbjct: 421 GFDEISVKLSTRPDKRVGTDEAWDHAEAIMGSVLETIRTRSGNRIKTSINPGEGAFYGPK 480

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           FEY+LKDAIGR+WQCGT QVDFNLP RF AFY+ S SEK  PVM+HRA+ GS+ERF+GI+
Sbjct: 481 FEYVLKDAIGREWQCGTTQVDFNLPERFGAFYIGSDSEKKQPVMVHRAICGSMERFLGIL 540

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IEN+ G+ PLW +P Q +V TITS A  YA E+   LK+  L  E D RNE INYK+REH
Sbjct: 541 IENYSGHFPLWFAPQQVVVATITSEADGYATEVVAKLKAAGLLAEADLRNEKINYKVREH 600

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           S+ K+P+I++CG +EA E+++ IRR GS   + + L +AI  LT+E++ PD ++
Sbjct: 601 SLAKVPVILVCGKREAEEQTVNIRRLGSRDQESLGLAEAIAQLTEEAVTPDRRR 654


>gi|260463880|ref|ZP_05812076.1| threonyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075]
 gi|259030255|gb|EEW31535.1| threonyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075]
          Length = 658

 Score =  745 bits (1924), Expect = 0.0,   Method: Composition-based stats.
 Identities = 399/654 (61%), Positives = 511/654 (78%), Gaps = 2/654 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M + + LTFPDGS++++    TG+ +AESIS+SLAKKAVA AI+G V DLSDP+ + G +
Sbjct: 1   MLNSVSLTFPDGSVRDYDAAMTGAGLAESISKSLAKKAVAYAIDGTVRDLSDPLGKSGKV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT +D R+L +IRH  AH++AEAVQ +WP  QV IGP+IE+GFYYDF + +PF+ D+ 
Sbjct: 61  EIITRDDARALELIRHDTAHVLAEAVQELWPGTQVTIGPVIENGFYYDFARNEPFTPDDF 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM+EIIAR+ PF K+  S E+A+++F  K E YK+E++++IP  +++ +Y QG+W
Sbjct: 121 PVIEKKMREIIARNKPFTKEVWSREQAKKVFADKGERYKLELIDAIPEDQDLKIYAQGDW 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPH+ STGQ+   FKLMKVAGAYWRGDSN PML+RIYGTAW  Q +L  Y   LE
Sbjct: 181 FDLCRGPHMASTGQIGNAFKLMKVAGAYWRGDSNNPMLTRIYGTAWADQAQLDAYQTMLE 240

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+EKRDHRKL REMDLFH  E+G GV+FWH KGWK+FQ L++YMRR++ +  Y+E+N PQ
Sbjct: 241 EAEKRDHRKLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVNYMRRRLDEQGYQEVNAPQ 300

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           VLD+ LW+ SGHW  YR  MF V  A D   D R FALKPMNCPGHV +F HGLKSYR+L
Sbjct: 301 VLDKSLWETSGHWGWYRDAMFKVTVAGDDTDDDRVFALKPMNCPGHVQIFKHGLKSYRDL 360

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           PV+LAEFG+V+R EPSG+LHGLMRVRGFTQDDAH+FCT+EQ+  ECL+I++LI+S Y DF
Sbjct: 361 PVKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQLAAECLRINDLILSTYADF 420

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE++ VKLSTRP+KRVG+D  WD AE IM  VL+TI+  S +RI T +  GEGAFYGPK
Sbjct: 421 GFEEVSVKLSTRPDKRVGTDEAWDHAEAIMGNVLETIRTRSGNRIKTSINPGEGAFYGPK 480

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           FEY+LKDAIGR+WQCGT QVDFNLP RF AFY+ S SEK  PVM+HRA+ GS+ERF+GI+
Sbjct: 481 FEYVLKDAIGREWQCGTTQVDFNLPERFGAFYIGSDSEKKQPVMVHRAICGSMERFLGIL 540

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IEN+ G+ PLW +P+Q +V TITS A  YA E+   LK+  L  E D RNE INYK+REH
Sbjct: 541 IENYSGHFPLWFAPLQVVVATITSEADGYATEVVAKLKAAGLLAEADLRNEKINYKVREH 600

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           S+ K+P+I++CG +EA E+++ IRR GS   Q + L +AI  LT+E++ PD ++
Sbjct: 601 SLAKVPVILVCGKREAEEQTVNIRRLGSRDQQSLGLAEAIAQLTEEAITPDRRR 654


>gi|39936469|ref|NP_948745.1| threonyl-tRNA synthetase [Rhodopseudomonas palustris CGA009]
 gi|73919820|sp|Q6N4D3|SYT_RHOPA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|39650325|emb|CAE28847.1| threonyl-tRNA synthetase [Rhodopseudomonas palustris CGA009]
          Length = 658

 Score =  745 bits (1922), Expect = 0.0,   Method: Composition-based stats.
 Identities = 376/652 (57%), Positives = 498/652 (76%), Gaps = 2/652 (0%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEI 61
             I +TFPDG  + +P   TG D+A+ IS SLAK+ V +A+NG + DL+DP+ +  SI+ 
Sbjct: 2   DQITITFPDGKTREYPRGTTGLDIAKGISPSLAKRTVVMALNGTLTDLADPIDDNASIDF 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +  +D R+L +IRH CAH++AEAVQS+WP  QV IGP IE+GFYYDF + +PF+ ++ A 
Sbjct: 62  VARDDARALELIRHDCAHVLAEAVQSLWPGTQVTIGPTIENGFYYDFFRNEPFTPEDFAA 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEKKM+EIIARD PF K+  + ++A+++F    EA+KVE++++IP  + + +Y+QGEWFD
Sbjct: 122 IEKKMREIIARDKPFTKEVWTRDEAKKVFADNGEAFKVELVDAIPEDQTIKIYKQGEWFD 181

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ STG++   FKLMKVAGAYWRGDSN PML+RIYGTA+  Q +L  YL+ +EE+
Sbjct: 182 LCRGPHMTSTGKIGTAFKLMKVAGAYWRGDSNNPMLTRIYGTAFAKQDDLDAYLHQIEEA 241

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLD 301
           EKRDHRKL RE+DLFH  E+G GV+FWH KGW +FQ+L+ YMRR++  DY+E+N PQ+LD
Sbjct: 242 EKRDHRKLGRELDLFHFQEEGPGVVFWHAKGWSLFQSLVGYMRRRLAGDYDEVNAPQILD 301

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW+ YR NMFA + A D  +D R FALKPMNCPGHV +F HGLKSYR+LP+R
Sbjct: 302 KVLWETSGHWEWYRENMFAAQSAGDDAEDKRWFALKPMNCPGHVQIFKHGLKSYRDLPLR 361

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFG V+R EPSG++HGLMRVRGFTQDDAHVFCT+ Q+  EC+KI++LI+S Y DFGFE
Sbjct: 362 LAEFGVVHRYEPSGAMHGLMRVRGFTQDDAHVFCTEAQLAEECIKINDLILSTYSDFGFE 421

Query: 422 -KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
            ++ VKLSTRPEKRVG+D +WD AE +M  VL  IK    +RI T +  GEGAFYGPKFE
Sbjct: 422 GELTVKLSTRPEKRVGTDEMWDHAERVMATVLSEIKAKGGNRIKTEINPGEGAFYGPKFE 481

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           Y+L+DAIGRDWQCGT QVDFNLP RF AFY+++   K  PVM+HRA+ GS+ERF GI+IE
Sbjct: 482 YVLRDAIGRDWQCGTTQVDFNLPERFGAFYIDADGAKKAPVMVHRAICGSMERFTGILIE 541

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           ++ GN PLWL+P+Q +VTTITS   +YA+++   L+   L  + D RNE IN+K+REHS+
Sbjct: 542 HYAGNFPLWLAPVQVVVTTITSEGDDYAKKVLAALRKAGLRADIDLRNEKINFKVREHSL 601

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
            K+P +++ G KEA   S+ +RR GS   + +   +AI  L  E+ PPD ++
Sbjct: 602 AKVPALLVVGKKEAESHSVSVRRLGSDGQKVMPTDEAIAALVDEATPPDVKR 653


>gi|319783887|ref|YP_004143363.1| threonyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317169775|gb|ADV13313.1| threonyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 658

 Score =  745 bits (1922), Expect = 0.0,   Method: Composition-based stats.
 Identities = 396/654 (60%), Positives = 512/654 (78%), Gaps = 2/654 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M + + LTFPDGS++ +    TG+ +AESIS+SLAKKAVA AI+G V DLSDP+ + G +
Sbjct: 1   MLNSVSLTFPDGSVREYDAAMTGAGLAESISKSLAKKAVAYAIDGTVRDLSDPLGKSGKV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EI+T +DPR+L +IRH  AH++AEAVQ +WP  QV IGP+IE+GFYYDF + +PF+ D+ 
Sbjct: 61  EIVTRDDPRALELIRHDAAHVLAEAVQELWPGTQVTIGPVIENGFYYDFARNEPFTPDDF 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM+EII+R+ PF K+  S +KA+++F  K E YK+E++++IP  +++ +Y QG+W
Sbjct: 121 PVIEKKMREIISRNKPFTKEVWSRDKAKKVFADKGERYKLELIDAIPEDQDLKIYAQGDW 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPH+ STGQ+   FKLMKVAGAYWRGDSN PML+RIYGTAW  Q +L  Y   LE
Sbjct: 181 FDLCRGPHMASTGQIGNAFKLMKVAGAYWRGDSNNPMLTRIYGTAWADQAQLEAYQTMLE 240

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+EKRDHRK+ REMDLFH  E+G GV+FWH KGWK+FQ L++YMRR++ +  Y+E+N PQ
Sbjct: 241 EAEKRDHRKIGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVNYMRRRLDEQGYQEVNAPQ 300

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           VLD+ LW+ SGHW  YR  MF V  A D   D R FALKPMNCPGHV +F HGLKSYR+L
Sbjct: 301 VLDKSLWETSGHWGWYRDAMFKVTVAGDDTDDDRVFALKPMNCPGHVQIFKHGLKSYRDL 360

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           PV+LAEFG+V+R EPSG+LHGLMRVRGFTQDDAH+FCT+EQ+  ECL+I++LI+S Y DF
Sbjct: 361 PVKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQLAAECLRINDLILSTYADF 420

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF++I VKLSTRP+KRVG+D  WD AE IM GVL+TI+  S +RI T +  GEGAFYGPK
Sbjct: 421 GFDEISVKLSTRPDKRVGTDEAWDHAEAIMGGVLETIRTRSGNRIKTSINPGEGAFYGPK 480

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           FEY+LKDAIGR+WQCGT QVDFNLP RF AFY+ S SEK  PVM+HRA+ GS+ERF+GI+
Sbjct: 481 FEYVLKDAIGREWQCGTTQVDFNLPERFGAFYIGSDSEKKQPVMVHRAICGSMERFLGIL 540

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IEN+ G+ PLW +P+Q +V TITS A +YA E+   LK+  L  E D RNE INYK+REH
Sbjct: 541 IENYSGHFPLWFAPLQVVVATITSDADDYATEVVAKLKAAGLLAEADLRNEKINYKVREH 600

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           S+ K+P+I++CG +EA E+++ +RR GS   + + L  AI  LT+E++ PD ++
Sbjct: 601 SLAKVPVILVCGKREAEEQTVNMRRLGSRDQESLGLDQAIAQLTEEAVTPDRRR 654


>gi|209549439|ref|YP_002281356.1| threonyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|238065117|sp|B5ZQK2|SYT_RHILW RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|209535195|gb|ACI55130.1| threonyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 668

 Score =  744 bits (1920), Expect = 0.0,   Method: Composition-based stats.
 Identities = 432/656 (65%), Positives = 522/656 (79%), Gaps = 6/656 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIE 60
           M   I LTFPDGS+++FP  ATG DVAESIS+SLAK AVA+AI+G V DLSD V +G IE
Sbjct: 1   MSEAIFLTFPDGSVRSFPAGATGRDVAESISKSLAKSAVAIAIDGTVQDLSDTVADGKIE 60

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           IIT +D R+L +IRH  AH+MAEAVQ +WP  QV IGP+IE+GFYYDF K +PF+ D+L 
Sbjct: 61  IITRKDGRALELIRHDAAHVMAEAVQELWPGTQVTIGPVIENGFYYDFAKNEPFTPDDLP 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IEKKM+EIIAR++PF KQ  S EKA+E+F +K E YKVE++++IPA +++ +Y QG+WF
Sbjct: 121 KIEKKMKEIIARNAPFTKQIWSREKAKEVFAAKGENYKVELVDAIPAGQDLKIYNQGDWF 180

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ STGQV   FKLMKVAGAYWRGDSN  MLSRIYGTAW  Q +L  YL+ L E
Sbjct: 181 DLCRGPHMASTGQVGTAFKLMKVAGAYWRGDSNNAMLSRIYGTAWADQADLDNYLHMLAE 240

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVL 300
           +EKRDHRKL REMDLFH  E+G GV+FWH KGW+IFQ L+SYMRR++  DYEE+N PQVL
Sbjct: 241 AEKRDHRKLGREMDLFHFQEEGPGVVFWHGKGWRIFQALVSYMRRRLAVDYEEVNAPQVL 300

Query: 301 DQHLWQQSGHWDSYRANMFAVK------CADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
           D  LW+ SGHW  Y+ NMFAVK        +D   D R FALKPMNCPGHV +F HGLKS
Sbjct: 301 DTALWETSGHWGWYQENMFAVKSAHAMTHPEDKEADNRVFALKPMNCPGHVQIFKHGLKS 360

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YRELP+RLAEFG V+R EPSG+LHGLMRVRGFTQDDAH+FCT EQM  ECLKI++LI+S+
Sbjct: 361 YRELPIRLAEFGLVHRYEPSGALHGLMRVRGFTQDDAHIFCTDEQMAAECLKINDLILSV 420

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           Y+DFGF++I+VKLSTRPEKRVGSDALWD AE +M  VL TI+  S+ RI TG+L GEGAF
Sbjct: 421 YEDFGFKEIVVKLSTRPEKRVGSDALWDRAEAVMTDVLKTIEAQSEGRIKTGILPGEGAF 480

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPKFEY LKDAIGR+WQCGT QVDFNLP RF AFY++S+SEK  PVMIHRA+ GS+ERF
Sbjct: 481 YGPKFEYTLKDAIGREWQCGTTQVDFNLPERFGAFYIDSNSEKTQPVMIHRAICGSMERF 540

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
           +GI+IENF G+LPLW+SP+Q +V TITS A  Y  E+A  L+   L++ETDFRNE INYK
Sbjct: 541 LGILIENFAGHLPLWVSPLQVVVATITSEADAYGLEVAEALREAGLNVETDFRNEKINYK 600

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDC 650
           +REHS+ K+P+II+CG KEA ER++ IRR GS     + L  A+  L  E+ PPD 
Sbjct: 601 VREHSVTKVPVIIVCGRKEAEERTVNIRRLGSQDQVSMGLDAAVDSLALEATPPDV 656


>gi|148256517|ref|YP_001241102.1| threonyl-tRNA synthetase [Bradyrhizobium sp. BTAi1]
 gi|146408690|gb|ABQ37196.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Bradyrhizobium
           sp. BTAi1]
          Length = 688

 Score =  742 bits (1915), Expect = 0.0,   Method: Composition-based stats.
 Identities = 381/652 (58%), Positives = 498/652 (76%), Gaps = 3/652 (0%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
             I + FPDG+ + +P   TG D+A+ IS SLAK+ VA+A+NG + DL+DP+  +  +E+
Sbjct: 32  EKITIAFPDGAKREYPRGTTGLDIAKGISPSLAKRTVAMALNGDLADLNDPITEDAKLEL 91

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +  +DPR+L +IRH CAH++AEAVQS+WP  QV IGP+IE+GFYYDF + +PF+ ++ A 
Sbjct: 92  VDRDDPRALELIRHDCAHVLAEAVQSLWPGTQVTIGPVIENGFYYDFFRNEPFTPEDFAA 151

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEKKM+EII RD PF K+    EK +++F  K EA+KVE++++IP  E + +Y QG+WFD
Sbjct: 152 IEKKMREIIGRDKPFTKEVWDREKTKQVFRDKGEAFKVELVDAIPGDEPIKIYSQGDWFD 211

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ STG++   FKLMKVAGAYWRGDSN PML+RIYGTA+  Q++L  YL  +EE+
Sbjct: 212 LCRGPHMTSTGKIGNAFKLMKVAGAYWRGDSNNPMLTRIYGTAFARQEQLDAYLKQIEEA 271

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLD 301
           EKRDHRKL RE+DLFH  E+G GV+FWH KGW IFQ LI+YMRR++  +Y+E+N PQ+LD
Sbjct: 272 EKRDHRKLGRELDLFHFQEEGPGVVFWHPKGWSIFQALIAYMRRRLAGEYDEVNAPQILD 331

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW+ YR NMFA + A D  +D R FALKPMNCPGHV +F HGLKSYR+LP+R
Sbjct: 332 KSLWETSGHWNWYRENMFAAQSAGDEAEDKRWFALKPMNCPGHVQIFKHGLKSYRDLPLR 391

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFG V+R E SG++HGLMRVRGFTQDDAH+FCT++Q+  ECLKI++LI+S Y DFGFE
Sbjct: 392 LAEFGVVHRYEASGAMHGLMRVRGFTQDDAHIFCTEDQLAEECLKINDLILSTYSDFGFE 451

Query: 422 -KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
            ++ VKLSTRPEKRVG+D +WD AE +M  VL+ IK   ++ I T +  GEGAFYGPKFE
Sbjct: 452 GELTVKLSTRPEKRVGTDEMWDHAERVMATVLNEIKAQ-RNNIRTEINPGEGAFYGPKFE 510

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           Y+L+DAIGRDWQCGT QVDFNLP RF AFY+++   K  PVM+HRA+ GS+ERFIGI+IE
Sbjct: 511 YVLRDAIGRDWQCGTTQVDFNLPERFGAFYIDADGAKKAPVMVHRAICGSMERFIGILIE 570

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           ++ G+ PLWL+P Q +VTTITS   EYA+++   L+   L  E D RNE INYK+REHS+
Sbjct: 571 HYAGSFPLWLAPTQVVVTTITSEGDEYAKQVLAALRRAGLRAEIDLRNEKINYKVREHSM 630

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           +KIP +++ G KEA   S+ +RR G      +   DAI  L  E+ PPD Q+
Sbjct: 631 QKIPALLVVGKKEAETHSVSVRRLGRDGQTVMPTADAIAALVDEATPPDVQR 682


>gi|146339967|ref|YP_001205015.1| threonyl-tRNA synthetase [Bradyrhizobium sp. ORS278]
 gi|146192773|emb|CAL76778.1| Threonyl-tRNA synthetase (Threonine--tRNA ligase) (ThrRS)
           [Bradyrhizobium sp. ORS278]
          Length = 688

 Score =  741 bits (1914), Expect = 0.0,   Method: Composition-based stats.
 Identities = 382/652 (58%), Positives = 498/652 (76%), Gaps = 3/652 (0%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
             I ++FPDG+ + +P   TG D+A+ IS SLAK+ VA+A+NG V DL+DP+  +  +E+
Sbjct: 32  EKITISFPDGAKREYPRGTTGLDIAKGISPSLAKRTVAMALNGDVADLNDPINEDARLEL 91

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +  +DPR+L +IRH CAH++AEAVQ++WP  QV IGP+IE+GFYYDF + +PF+ ++ A 
Sbjct: 92  VDRDDPRALELIRHDCAHVLAEAVQALWPGTQVTIGPVIENGFYYDFFRNEPFTPEDFAA 151

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEKKM+EII RD PF K+    EK +++F  K EA+KVE++++IP  E + +Y QG+WFD
Sbjct: 152 IEKKMREIIGRDKPFTKEVWDREKTKQVFRDKGEAFKVELVDAIPGNEPIKIYYQGDWFD 211

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ STG++   FKLMKVAGAYWRGDSN PML+RIYGTA+  Q++L  YL  +EE+
Sbjct: 212 LCRGPHMTSTGKIGNAFKLMKVAGAYWRGDSNNPMLTRIYGTAFAKQEQLDAYLKQIEEA 271

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLD 301
           EKRDHRKL RE+DLFH  E+G GV+FWH KGW IFQ LI+YMRR++  DY+E+N PQ+LD
Sbjct: 272 EKRDHRKLGRELDLFHFQEEGPGVVFWHPKGWSIFQALIAYMRRRLAGDYDEVNAPQILD 331

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW+ YR NMFA + A D  +D R FALKPMNCPGHV +F HGLKSYR+LP+R
Sbjct: 332 KSLWETSGHWNWYRENMFAAQSAGDEAEDKRWFALKPMNCPGHVQIFKHGLKSYRDLPMR 391

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFG V+R E SG++HGLMRVRGFTQDDAHVFCT++Q+  ECLKI++LI+S Y DFGFE
Sbjct: 392 LAEFGVVHRYEASGAMHGLMRVRGFTQDDAHVFCTEDQLAEECLKINDLILSTYSDFGFE 451

Query: 422 -KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
            ++ VKLSTRPEKRVG+D +WD AE +M  VL+ IK    + I T +  GEGAFYGPKFE
Sbjct: 452 GELTVKLSTRPEKRVGTDEMWDHAERVMATVLNEIKAQ-NNHIRTEINPGEGAFYGPKFE 510

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           Y+L+DAIGRDWQCGT QVDFNLP RF AFY+++   K  PVM+HRA+ GS+ERFIGI+IE
Sbjct: 511 YVLRDAIGRDWQCGTTQVDFNLPERFGAFYIDADGAKKAPVMVHRAICGSMERFIGILIE 570

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           ++ G+ PLWL+P Q +VTTITS   EYA+++   L+   L  E D RNE INYK+REHS+
Sbjct: 571 HYAGSFPLWLAPTQVVVTTITSEGDEYAKQVLAALRRAGLRAEIDLRNEKINYKVREHSL 630

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           +KIP +++ G KEA   S+ +RR G      +   DAI  L  E+ PPD ++
Sbjct: 631 QKIPALLVVGKKEAETHSVSVRRLGRDGQTVMPTADAIAALVDEATPPDVRR 682


>gi|110633361|ref|YP_673569.1| threonyl-tRNA synthetase [Mesorhizobium sp. BNC1]
 gi|123058100|sp|Q11JM1|SYT_MESSB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|110284345|gb|ABG62404.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Chelativorans
           sp. BNC1]
          Length = 656

 Score =  741 bits (1912), Expect = 0.0,   Method: Composition-based stats.
 Identities = 407/653 (62%), Positives = 512/653 (78%), Gaps = 1/653 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           M     LTFPDGS++N     TG+D+AESIS+SLAKKAVA A++G + DLSDPV   G I
Sbjct: 1   MAEAASLTFPDGSVRNVDAAMTGADIAESISKSLAKKAVAYAMDGSLRDLSDPVERSGKI 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT EDPR+L +IRH  AH++AEAVQ +WP  QV IGP+IE+GFYYDF + +PF+ D+L
Sbjct: 61  EIITREDPRALELIRHDAAHVLAEAVQELWPGTQVTIGPVIENGFYYDFARNEPFTLDDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM+EI+ R+  F K+    +KA+++F  K E+YKVE++++IP  +++ +Y QG+W
Sbjct: 121 PVIEKKMREIVDRNKRFSKEVWPRDKAKKVFADKGESYKVELIDAIPEDQDLKIYFQGDW 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPH+ STGQ+ K FKLMKVAGAYWRGDSNRPML+RIYGTAW  QQ+L  YL  LE
Sbjct: 181 FDLCRGPHMASTGQIGKAFKLMKVAGAYWRGDSNRPMLTRIYGTAWADQQQLDSYLQMLE 240

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQV 299
           E+EKRDHR+L REMDLFH  E+G GV+FWH KGW++FQ L+SYMRR++   Y+E+N PQV
Sbjct: 241 EAEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWRMFQNLVSYMRRRLDGVYQEVNAPQV 300

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           LD  LWQ SGHW  Y+ NMF V+CAD+  +D RTFALKPMNCPGHV +F HGLKSYR+LP
Sbjct: 301 LDHSLWQTSGHWGWYKENMFKVECADEEAEDKRTFALKPMNCPGHVQIFKHGLKSYRDLP 360

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +RLAEFG+V+R EPSG+LHGLMRVRGFTQDDAH+FCT++Q+  ECLKI++LI+S Y DFG
Sbjct: 361 IRLAEFGAVHRYEPSGALHGLMRVRGFTQDDAHIFCTEDQLAEECLKINDLILSTYADFG 420

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           FE+I V  STRPEKRVGSDALWD AE IM GVL+ I   S  RI T +  G+GAFYGPKF
Sbjct: 421 FEEIQVFFSTRPEKRVGSDALWDHAEEIMGGVLEQIAERSGGRIKTAINPGDGAFYGPKF 480

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +Y+LKDAIGR WQCGT QVDFNLP RF AFY++  SEK  PVMIHRA+ GS+ERF+GI+I
Sbjct: 481 DYVLKDAIGRQWQCGTTQVDFNLPERFGAFYIDKDSEKKQPVMIHRAICGSMERFLGILI 540

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           EN+ G+ PLW +P+Q +V TITS A +YA+++   LK+  L+ E D RNE INYK+REHS
Sbjct: 541 ENYAGHFPLWFAPLQVVVATITSDADDYARQVTQQLKAAGLTAEADLRNEKINYKVREHS 600

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           + K+P+I++CG +EA E S+ IRR GS     + L +AI  L  E+ PPD ++
Sbjct: 601 LAKVPVILVCGKREAEEGSVNIRRLGSRDQASLLLAEAIAQLIDEATPPDIRR 653


>gi|209884754|ref|YP_002288611.1| threonyl-tRNA synthetase [Oligotropha carboxidovorans OM5]
 gi|209872950|gb|ACI92746.1| threonyl-tRNA synthetase [Oligotropha carboxidovorans OM5]
          Length = 680

 Score =  738 bits (1905), Expect = 0.0,   Method: Composition-based stats.
 Identities = 383/652 (58%), Positives = 514/652 (78%), Gaps = 2/652 (0%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           + + +TFPDG+ + FP   +G ++A  IS SLAK+ VA+A++G V DL+DP+  + ++E+
Sbjct: 24  AKVTITFPDGAKREFPKGISGFEIARGISPSLAKRTVAMALDGVVSDLADPIEQDATLEL 83

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           I  +DPR+L +IRH CAH++AEAVQ++WP  QV IGP+IE+GFYYDF + +PF+ ++ A 
Sbjct: 84  INRDDPRALELIRHDCAHVLAEAVQTLWPGTQVTIGPVIENGFYYDFFRNEPFTPEDFAA 143

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEKKM+EIIARD+PF K+  + +  +++F  K EA+KVE++++IPA +++ +Y+QGEWFD
Sbjct: 144 IEKKMREIIARDAPFTKEVWTRDDTKKVFADKGEAFKVELVDAIPADQSIKIYKQGEWFD 203

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ STG++   FKLMKVAGAYWRGDSN PML+RIYGTA+  QQ L  YL  LEE+
Sbjct: 204 LCRGPHMTSTGKIGNAFKLMKVAGAYWRGDSNNPMLTRIYGTAFANQQALDAYLKQLEEA 263

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLD 301
           EKRDHR+L REMDLFH  E+G GV+FWH KGW +FQ +I+YMRR++  DY+E+N PQ+LD
Sbjct: 264 EKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWTVFQEIIAYMRRRLAADYDEVNAPQMLD 323

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW+ YR NMFA + A D  +D R FA+KPMNCPGHV +F HGLKSYRELP+R
Sbjct: 324 KSLWETSGHWEWYRENMFAAQSAGDEAEDKRWFAIKPMNCPGHVLIFKHGLKSYRELPIR 383

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFG V+R EPSG++HGLMRVRGFTQDDAH+FCT++Q+  ECLKI++LI+S Y DFGFE
Sbjct: 384 LAEFGVVHRYEPSGAMHGLMRVRGFTQDDAHIFCTEQQLAEECLKINDLILSTYADFGFE 443

Query: 422 -KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
            ++ VKLSTRP+KRVGSDA WD AE++M  VL+ IK  S +RI T +  GEGAFYGPKFE
Sbjct: 444 GELTVKLSTRPDKRVGSDAAWDHAESVMTTVLEQIKAKSGNRITTSINPGEGAFYGPKFE 503

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           Y+L+DAIGR+WQCGT QVDFNLP RF AFY++ HS K  PVM+HRA+ GS+ERF GI+IE
Sbjct: 504 YVLRDAIGREWQCGTTQVDFNLPERFGAFYIDEHSNKVAPVMVHRAICGSLERFAGILIE 563

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           ++ G+ PLWL+P+QA++TTITS   +YA+E+    ++  L ++ D RNE INYK+REHS+
Sbjct: 564 HYAGHFPLWLAPVQAVITTITSDGDDYAREVFEACRAAGLRVDIDLRNEKINYKVREHSL 623

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
            K+P +++ G KEA  R++ IRR G   +  V L +A+  LT E++PPD ++
Sbjct: 624 AKVPALLVVGKKEAETRAVSIRRLGKEGSSVVPLDEALKALTTEAIPPDVKR 675


>gi|319408458|emb|CBI82113.1| Threonyl-tRNA synthetase [Bartonella schoenbuchensis R1]
          Length = 659

 Score =  736 bits (1901), Expect = 0.0,   Method: Composition-based stats.
 Identities = 402/654 (61%), Positives = 511/654 (78%), Gaps = 2/654 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSI 59
           M   I L+FPDGS +++P   TG ++AESIS+SLAKKAVA ++NG + DLSDP+ + G +
Sbjct: 1   MSDLIFLSFPDGSKRDYPSEMTGLELAESISKSLAKKAVAYSLNGIIRDLSDPLEQSGQV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT +DPR+L +IRH CAH++AEAVQ ++PE QV IGP+IE+GFYYDF ++QPF+ D+L
Sbjct: 61  EIITRDDPRALELIRHDCAHVLAEAVQELFPETQVTIGPVIENGFYYDFARKQPFTLDDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM+EII R+ PF K+  S EKA+++F  K E YKVEI+++IP  ++V +Y QG+W
Sbjct: 121 TIIEKKMREIIQRNKPFRKEIWSREKAKKIFSEKNELYKVEIIDAIPEDQDVKVYYQGDW 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPH++STGQ+   FKLMKVAGAYWRGD+N PML+RIYGTA+  + +L  YL+ LE
Sbjct: 181 FDLCRGPHMQSTGQIGNAFKLMKVAGAYWRGDANNPMLTRIYGTAFANENDLKAYLHTLE 240

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQ 298
           E+EKRDHR+L REMDLFH  E+  G+IFWH KGWK+FQ LISYMRR++ D  Y+E+N PQ
Sbjct: 241 EAEKRDHRRLGREMDLFHFQEESPGMIFWHPKGWKMFQNLISYMRRRLDDHKYDEVNAPQ 300

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           VLD+ LW+ SGHW  Y+ NMF    A D   D   +ALKPMNCPGHV +F HGLKSYR+L
Sbjct: 301 VLDKSLWEISGHWGWYKENMFQTTPAADDWDDQCIYALKPMNCPGHVQIFKHGLKSYRDL 360

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFG V+R EPSGSLHGLMRVR FTQDDAH+FCT EQ+ +ECL I++LI+S Y DF
Sbjct: 361 PIRLAEFGIVHRYEPSGSLHGLMRVRSFTQDDAHIFCTDEQLADECLNINDLILSTYADF 420

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE+I +K STRPEKRVGSD LWD  E+IM  VL TI+  S+ RI T +L GEGAFYGPK
Sbjct: 421 GFEEISLKFSTRPEKRVGSDELWDHCEDIMLSVLKTIEKKSEGRIKTSILPGEGAFYGPK 480

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           FEY LKDAIGR+WQCGT QVDFNLP RF AFY++  SEK  PVMIHRA+ GS+ERF+GI+
Sbjct: 481 FEYTLKDAIGREWQCGTTQVDFNLPERFGAFYIDKDSEKRQPVMIHRAILGSMERFLGIL 540

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IENF G++PLWL+P Q +V  ITS A EYA++I   LK+  LS   D RNE INYKIREH
Sbjct: 541 IENFSGHMPLWLAPQQVVVAPITSEANEYAEKITKKLKAIGLSATADLRNEKINYKIREH 600

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           S++K+P+I++CG +E+   S+ +RR GST    +S+ + +  L+ E+ PPD ++
Sbjct: 601 SLQKVPVILVCGKRESETNSVSMRRLGSTDQTVLSIEEVMKQLSNEATPPDLRR 654


>gi|86749289|ref|YP_485785.1| threonyl-tRNA synthetase [Rhodopseudomonas palustris HaA2]
 gi|86572317|gb|ABD06874.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase
           [Rhodopseudomonas palustris HaA2]
          Length = 661

 Score =  736 bits (1899), Expect = 0.0,   Method: Composition-based stats.
 Identities = 372/655 (56%), Positives = 498/655 (76%), Gaps = 3/655 (0%)

Query: 1   MPSD-IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GS 58
           M ++ + +TFPDG  +++P   TG D+A+ IS SLAK+ VA+A+NG + DL+DP+ E  +
Sbjct: 1   MSAEQVTVTFPDGKTRDYPRGTTGLDIAKGISPSLAKRTVAMALNGVLTDLADPIEENAA 60

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           I+ +  +D R+L +IRH CAH++AEAVQS+WP  QV IGP IE+GFYYDF + +PF+ ++
Sbjct: 61  IDFVARDDARALELIRHDCAHVLAEAVQSLWPGTQVTIGPTIENGFYYDFFRNEPFTPED 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
              IEKKM+EII RD PF K+  S ++ +++F    E +KVE++++IPA + + +Y+QG+
Sbjct: 121 FGAIEKKMREIIQRDKPFTKEIWSRDETKKVFADNGEMFKVELVDAIPADQTIKIYKQGD 180

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           WFDLCRGPH+ STG++   FKLMKVAGAYWRGDSN PML+RIYGTA+  Q +L  YL  +
Sbjct: 181 WFDLCRGPHMTSTGKIGTAFKLMKVAGAYWRGDSNNPMLTRIYGTAFAKQDDLDAYLKQI 240

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQ 298
           EE+EKRDHRKL RE+DLFH  E+G GV+FWH KGW IFQ+L+ YMRR++  DY+E+N PQ
Sbjct: 241 EEAEKRDHRKLGRELDLFHFQEEGPGVVFWHAKGWSIFQSLVGYMRRRLAGDYDEVNAPQ 300

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +LD+ LW+ SGHW+ YR NMFA + A +  +D R FALKPMNCPGHV +F HGLKSYR+L
Sbjct: 301 ILDKVLWETSGHWEWYRENMFAAQSAGEDAEDKRWFALKPMNCPGHVQIFKHGLKSYRDL 360

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG V+R EPSG++HGLMRVRGFTQDDAHVFCT+ Q+ +EC+KI++LI+S Y DF
Sbjct: 361 PLRMAEFGVVHRYEPSGAMHGLMRVRGFTQDDAHVFCTEAQLADECMKINDLIMSTYSDF 420

Query: 419 GFE-KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           GF+ ++ VKLSTRP+KRVG+D +WD AE +M  VL  IK    +RI T +  GEGAFYGP
Sbjct: 421 GFDGELTVKLSTRPDKRVGTDEMWDHAERVMATVLSEIKAQGSNRIKTEINPGEGAFYGP 480

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           KFEY+L+DAIGRDWQCGT QVDFNLP RF AFY+++   K  PVM+HRA+ GS+ERFIGI
Sbjct: 481 KFEYVLRDAIGRDWQCGTTQVDFNLPERFGAFYIDADGAKKAPVMVHRAICGSMERFIGI 540

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE+F GN PLWL+P+Q +V TITS   EYA+++    +   L ++ D RNE IN K+RE
Sbjct: 541 LIEHFAGNFPLWLAPVQLVVATITSEGDEYAKQVVAAARRAGLRVDIDLRNEKINLKVRE 600

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           HS+ K+P +++ G KEA   S+ +RR GS     +   +AI  L  E+ PPD ++
Sbjct: 601 HSLAKVPALLVVGKKEAETHSVSVRRLGSDGQTVMPTAEAIAALVDEATPPDVRR 655


>gi|91977727|ref|YP_570386.1| threonyl-tRNA synthetase [Rhodopseudomonas palustris BisB5]
 gi|91684183|gb|ABE40485.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase
           [Rhodopseudomonas palustris BisB5]
          Length = 687

 Score =  736 bits (1899), Expect = 0.0,   Method: Composition-based stats.
 Identities = 369/652 (56%), Positives = 500/652 (76%), Gaps = 2/652 (0%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEI 61
             I +TFPDG  +++P   TG ++A+ IS SLAK+ V +A+NG + DL+DP+ +  +I+ 
Sbjct: 31  EQITVTFPDGKTRDYPRGTTGLEIAKGISPSLAKRTVVMALNGVLTDLADPIDDNAAIDF 90

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +  +D R+L +IRH CAH++AEAVQ++WP  QV IGP IE+GFYYDF + +PF+ ++ A 
Sbjct: 91  VARDDSRALELIRHDCAHVLAEAVQALWPGTQVTIGPTIENGFYYDFFRNEPFTPEDFAA 150

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEKKM+EIIARD PF K+  + ++ +++F    E +KVE++++IPA +++ +Y+QG+WFD
Sbjct: 151 IEKKMREIIARDKPFTKEVWTRDQTKQVFADNGEMFKVELVDAIPADQSIKIYKQGDWFD 210

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ STG++   FKLMKVAGAYWRGDSN PML+RIYGTA+  Q++L  YL  +EE+
Sbjct: 211 LCRGPHMTSTGKIGSAFKLMKVAGAYWRGDSNNPMLTRIYGTAFAKQEDLDAYLKQIEEA 270

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLD 301
           EKRDHR+L RE+DLFH  E+G GV+FWH KGW +FQ+L++YMRR++  +Y+E+N PQ+LD
Sbjct: 271 EKRDHRRLGRELDLFHFQEEGPGVVFWHAKGWSVFQSLVAYMRRRLAGNYDEVNAPQILD 330

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHWD YR NMFA + A +  +D R FALKPMNCPGHV +F HGLKSYR+LP+R
Sbjct: 331 KVLWETSGHWDWYRENMFAAQSAGENAEDKRWFALKPMNCPGHVQIFKHGLKSYRDLPLR 390

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AEFG V+R EPSG++HGLMRVRGFTQDDAHVFCT+ Q+  ECLKI++LI+S Y DFGF+
Sbjct: 391 MAEFGIVHRYEPSGAMHGLMRVRGFTQDDAHVFCTEAQLAEECLKINDLILSTYSDFGFD 450

Query: 422 -KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
            ++ VKLSTRP+KRVG+D +WD AE +M  VL  IK    +RI T +  GEGAFYGPKFE
Sbjct: 451 GELTVKLSTRPDKRVGTDEMWDHAERVMATVLSEIKAQGDNRIKTEINPGEGAFYGPKFE 510

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           Y+L+DAIGRDWQCGT QVDFNLP RF AFY+++   K  PVM+HRA+ GS+ERFIGI+IE
Sbjct: 511 YVLRDAIGRDWQCGTTQVDFNLPERFGAFYIDADGAKKAPVMVHRAICGSMERFIGILIE 570

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +F GN PLWL+P+Q +V TITS   EYA+++    +   L ++ D RNE IN K+REHS+
Sbjct: 571 HFAGNFPLWLAPVQLVVATITSEGDEYAKKVVAAARRAGLRVDIDLRNEKINLKVREHSL 630

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
            K+P +++ G KEA   S+ +RR GS     ++  DAI  L +E+ PPD ++
Sbjct: 631 AKVPALLVVGRKEAETHSVSVRRLGSDGQTVMATADAIAALVEEATPPDVKR 682


>gi|121601812|ref|YP_988945.1| threonyl-tRNA synthetase [Bartonella bacilliformis KC583]
 gi|166223323|sp|A1USJ2|SYT_BARBK RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|120613989|gb|ABM44590.1| threonyl-tRNA synthetase [Bartonella bacilliformis KC583]
          Length = 658

 Score =  733 bits (1891), Expect = 0.0,   Method: Composition-based stats.
 Identities = 404/654 (61%), Positives = 516/654 (78%), Gaps = 2/654 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSI 59
           M   I L+FPDGS ++FP   TG ++AESIS+SLAKKA+A ++NG + DL DP+ + G +
Sbjct: 1   MSFSISLSFPDGSQRDFPAEITGLELAESISKSLAKKAIAYSLNGVIRDLLDPLEQSGQV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT +DPR+L +IRHSCAH++AEAVQ ++PE QV IGP+IE+GFYYDF ++QPF+ ++L
Sbjct: 61  EIITRDDPRALQLIRHSCAHVLAEAVQELFPETQVTIGPVIENGFYYDFARQQPFTLEDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM+EII R+  F K+  S EKA+++F  K E YKVE++++IP  +++ +Y QG+W
Sbjct: 121 NTIEKKMREIIQRNKFFKKEIWSREKAKKIFSDKGELYKVELIDAIPEDQDLKIYYQGDW 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPHV STGQ+   FKLMKVAGAYWRGD+N PML+RIYGTA++ +  L  YL  LE
Sbjct: 181 FDLCRGPHVPSTGQIGNAFKLMKVAGAYWRGDANNPMLTRIYGTAFSNENALKAYLNMLE 240

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQ 298
           E+EKRDHR+L REMDLFH  E+G G+IFWH KGWK+FQ L+SYMRR++ +  Y+E+N PQ
Sbjct: 241 EAEKRDHRRLGREMDLFHFQEEGPGMIFWHPKGWKMFQNLVSYMRRRLDEHKYDEVNAPQ 300

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           VLD+ LW+ SGHW  Y+ NMF    A +   D   +ALKPMNCPGHV +F HGLKSYR+L
Sbjct: 301 VLDKSLWETSGHWGWYQENMFKTIPATNDWNDEHVYALKPMNCPGHVQIFKHGLKSYRDL 360

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFG ++R EPSGSLHGLMRVR FTQDDAHVFCT EQ+ +ECLKI++LI+S Y DF
Sbjct: 361 PIRLAEFGLLHRYEPSGSLHGLMRVRSFTQDDAHVFCTDEQLADECLKINDLILSTYADF 420

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE+I++KLSTRPEKRVGSD LWD AENIM  VL TI+  ++ RI T +L GEGAFYGPK
Sbjct: 421 GFEEIILKLSTRPEKRVGSDELWDHAENIMMSVLKTIEKEAKGRIKTSILQGEGAFYGPK 480

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           FEY LKDAIGR+WQCGT QVDFNLP RF  FY+N  SEKC PVMIHRA+FGS+ERF+GI+
Sbjct: 481 FEYTLKDAIGREWQCGTTQVDFNLPERFEVFYINRDSEKCQPVMIHRAIFGSMERFLGIL 540

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IENF G++PLWL+P Q +VTTITS A EYA++I   LK+  LS  +D R+E INYKIREH
Sbjct: 541 IENFAGHMPLWLAPQQIVVTTITSEANEYAEKITAKLKASGLSAVSDLRSEKINYKIREH 600

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           S++K+P+I++CG +E+   S+ +RR GS     + +  AI  LT E++PPD ++
Sbjct: 601 SLQKVPVILVCGKRESETNSVNMRRLGSMNQISLPIDQAIKQLTNEAIPPDLRR 654


>gi|240850680|ref|YP_002972080.1| threonyl-tRNA synthetase [Bartonella grahamii as4aup]
 gi|240267803|gb|ACS51391.1| threonyl-tRNA synthetase [Bartonella grahamii as4aup]
          Length = 658

 Score =  732 bits (1890), Expect = 0.0,   Method: Composition-based stats.
 Identities = 406/654 (62%), Positives = 514/654 (78%), Gaps = 2/654 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSI 59
           M   + L+FPDGS +N+P   TG ++AESIS+SLAKKAVA +++G   DLSDP+ + G +
Sbjct: 1   MSCSVSLSFPDGSKRNYPPEMTGLELAESISKSLAKKAVAYSLDGITRDLSDPLEQSGQV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT ED R+L +IRH CAH++AEAVQ ++PE QV IGP+IE+GFYYDF ++QPF+ D+L
Sbjct: 61  EIITREDSRALELIRHDCAHVLAEAVQELFPETQVTIGPVIENGFYYDFARQQPFTLDDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM+EII R+ PF K+  S EKAR+ F  KKE YKVE+++SIP  +++ +Y QG+W
Sbjct: 121 TIIEKKMREIIQRNKPFRKEIWSREKARKKFSEKKEFYKVELIDSIPEDQDLKIYYQGDW 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPH++STGQ+   FKLMKVAGAYWRGD+N PML+RIYGTA+  + +L  YL+ LE
Sbjct: 181 FDLCRGPHMQSTGQIGNAFKLMKVAGAYWRGDANNPMLTRIYGTAFANENDLKAYLHMLE 240

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQ 298
           E+EKRDHR+L REMDLFH  E+G G+IFWH+KGWK+FQ LI+YMRR++ D  Y E+N PQ
Sbjct: 241 EAEKRDHRRLGREMDLFHFQEEGPGMIFWHKKGWKMFQNLINYMRRRLDDHQYAEVNAPQ 300

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           VLD+ LW+ SGHW  Y+ NMF V    +       +ALKPMNCPGHV +F HGLKSYR+L
Sbjct: 301 VLDRSLWEISGHWGWYKENMFKVIPVAENSDHGNVYALKPMNCPGHVQIFKHGLKSYRDL 360

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFG V+R EPSGSLHGLMRVRGFTQDDAH+FCT EQ+ +ECL I++LI+S Y DF
Sbjct: 361 PIRLAEFGLVHRYEPSGSLHGLMRVRGFTQDDAHIFCTDEQLADECLSINDLILSTYADF 420

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF++I +KLSTRPEKRVGSDALWD AE+IM+ VL TI+     +I T +L GEGAFYGPK
Sbjct: 421 GFKEISLKLSTRPEKRVGSDALWDHAESIMESVLKTIETKFAGQIKTSILPGEGAFYGPK 480

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           FEY LKDAIGR+WQCGT Q+DFNLP RF AFY++  SEK  PVMIHRA+FGS+ERF+GI+
Sbjct: 481 FEYTLKDAIGREWQCGTTQIDFNLPERFGAFYIDKDSEKRQPVMIHRAIFGSMERFLGIL 540

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IENF G++PLWL+P Q +V TITS A EYAQ+I   L++  LS   D RNE INYKIREH
Sbjct: 541 IENFAGHMPLWLAPEQVVVATITSEANEYAQKITAKLRAIGLSATIDLRNEKINYKIREH 600

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           S++K+P+I++CG +EA   S+ +RR GST    +S+ D I  L+ E+ PPD Q+
Sbjct: 601 SLQKVPVILVCGKREAETNSVNMRRLGSTNKTLLSVEDVIKQLSNEATPPDLQR 654


>gi|27380648|ref|NP_772177.1| threonyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110]
 gi|27353813|dbj|BAC50802.1| threonyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110]
          Length = 723

 Score =  732 bits (1890), Expect = 0.0,   Method: Composition-based stats.
 Identities = 384/652 (58%), Positives = 499/652 (76%), Gaps = 3/652 (0%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           + + LTFPDG+ + +    TG ++A+ IS SLAK+ VA+A++G V DL DP+  +  IE+
Sbjct: 68  AKVTLTFPDGARREYDKSITGLEIAKGISPSLAKRTVAMALDGVVADLDDPIEADAKIEL 127

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           I  +DPR+L +IRH CAH++AEAVQ++WP  QV IGP+IE+GFYYDF + +PF+ ++ A 
Sbjct: 128 INRDDPRALELIRHDCAHVLAEAVQTLWPGTQVTIGPVIENGFYYDFFRNEPFTPEDFAA 187

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEKKM+EIIARD PF K+    EK +++F  K EA+KVE++++IP  E + +Y QG+WFD
Sbjct: 188 IEKKMREIIARDKPFTKEVWDREKTKQVFRDKGEAFKVELVDAIPGNEPIKIYYQGDWFD 247

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ STG+V   FKLMKVAGAYWRGDSN PML+RIYGTA+  Q++L  YL  +EE+
Sbjct: 248 LCRGPHMTSTGKVGNAFKLMKVAGAYWRGDSNNPMLTRIYGTAFAKQEDLDAYLKQIEEA 307

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLD 301
           EKRDHRKL RE+DLFH  E+G GV+FWH KGW IFQ LI+YMRR++  DY E+N PQ+LD
Sbjct: 308 EKRDHRKLGRELDLFHFQEEGPGVVFWHPKGWTIFQQLIAYMRRRLTGDYSEVNAPQILD 367

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW  YR NMFA + A D  +D R FALKPMNCPGHV +F HGLKSYR+LP+R
Sbjct: 368 KVLWETSGHWGWYRENMFAAQSAGDEAEDKRWFALKPMNCPGHVQIFKHGLKSYRDLPLR 427

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFG V+R EPSG++HGLMRVRGFTQDDAH+FCT++Q+  ECLKI++LI+S Y DFGF 
Sbjct: 428 LAEFGVVHRYEPSGAMHGLMRVRGFTQDDAHIFCTEDQLAEECLKINDLILSTYADFGFT 487

Query: 422 -KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
             + VKLSTRP+KRVG+DA+WD AE +M  VL  I+ S  + I T +  GEGAFYGPKFE
Sbjct: 488 GDLTVKLSTRPDKRVGTDAMWDHAERVMATVLREIQ-SQNNHIKTEINPGEGAFYGPKFE 546

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           Y+L+DAIGRDWQCGT QVDFNLP RF AFY++    K  PVM+HRA+ GS+ER+IGI+IE
Sbjct: 547 YVLRDAIGRDWQCGTTQVDFNLPERFGAFYIDHDGGKKPPVMVHRAICGSMERYIGILIE 606

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           ++ GN PLWLSP+QA+VTTITS   EYA+++    +   L +E D RNE INYK+REHS+
Sbjct: 607 HYAGNFPLWLSPVQAVVTTITSEGDEYAKQVLEQARRAGLRVEIDLRNEKINYKVREHSL 666

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
            KIP +++ G KEA   S+ +RR GS   + ++  +AI  L +E+ PPD  +
Sbjct: 667 AKIPALLVVGKKEAETHSVSVRRLGSDGQKVMTTAEAIAALVEEATPPDVVR 718


>gi|92117217|ref|YP_576946.1| threonyl-tRNA synthetase [Nitrobacter hamburgensis X14]
 gi|91800111|gb|ABE62486.1| Ser-tRNA(Thr) hydrolase [Nitrobacter hamburgensis X14]
          Length = 681

 Score =  731 bits (1886), Expect = 0.0,   Method: Composition-based stats.
 Identities = 389/652 (59%), Positives = 508/652 (77%), Gaps = 2/652 (0%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
            ++ L FPDG+ + FP + TG D+A+ IS SLAK+ VA+A++G V DL+DP+  +  IE 
Sbjct: 25  ENVTLAFPDGAQRQFPKNTTGLDIAKGISPSLAKRTVAMALDGVVSDLADPIERDAKIEF 84

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           I  +DPR+L +IRH  AH++AEAVQS+WP  QV IGP+IE+GFYYDF + +PFS ++   
Sbjct: 85  INRDDPRALELIRHDAAHVLAEAVQSLWPGTQVTIGPVIENGFYYDFFRNEPFSLEDFPA 144

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEKKM+EIIARD PF K     EK +++F  K EA+KVE++++IP  E + +Y QG+WFD
Sbjct: 145 IEKKMREIIARDKPFTKDVWDREKTKQVFRDKGEAFKVELVDAIPGDEPIKIYYQGDWFD 204

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ STG++   FKLMKVAGAYWRGDSN PML+RIYGTA+ +QQ+L  YL  +EE+
Sbjct: 205 LCRGPHMTSTGKIGNAFKLMKVAGAYWRGDSNNPMLTRIYGTAFASQQDLDAYLKQIEEA 264

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLD 301
           EKRDHR+L REMDLFH  E+G GV+FWH KGW +FQ +I+YMRR++ +DY+E+N PQ+LD
Sbjct: 265 EKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWTLFQEIIAYMRRRLAEDYDEVNAPQMLD 324

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW+ YR NMFA + A D  +D R FA+KPMNCPGHV +F HGLKSYRELP+R
Sbjct: 325 KSLWETSGHWEWYRENMFAAQSAGDEAEDKRWFAIKPMNCPGHVLIFKHGLKSYRELPIR 384

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFG V+R EPSG++HGLMRVRGFTQDDAH+FCT++Q+ +ECLKI++LI+S Y+DFGFE
Sbjct: 385 LAEFGVVHRYEPSGAMHGLMRVRGFTQDDAHIFCTEQQLADECLKINDLILSTYEDFGFE 444

Query: 422 -KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
            ++ VKLSTRP+KRVGSDA WD AE++M  VL+ IK  S +R+ T +  GEGAFYGPKFE
Sbjct: 445 GELTVKLSTRPDKRVGSDAAWDHAESVMTAVLEQIKARSGNRVKTSINPGEGAFYGPKFE 504

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           Y+L+DAIGR+WQCGT QVDFNLP RF AFY++ HS K  PVM+HRA+ GS+ERF GI+IE
Sbjct: 505 YVLRDAIGREWQCGTTQVDFNLPERFGAFYIDEHSNKVAPVMVHRAICGSLERFAGILIE 564

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +F G+ PLWL+P+QA+V TITS A +YA+E+    +   L IE D RNE INYK+REHS+
Sbjct: 565 HFAGHFPLWLAPVQAVVATITSDADDYAREVVAAARRAGLRIEIDLRNEKINYKVREHSL 624

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
            K+P +++ G KEA  RS+ IRR GS     +   +AI  L +E+ PPD ++
Sbjct: 625 AKVPALLVVGKKEAESRSVSIRRLGSDGQTVLPTDEAIAALVEEATPPDIKR 676


>gi|17987198|ref|NP_539832.1| threonyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|256044731|ref|ZP_05447635.1| threonyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|260564073|ref|ZP_05834559.1| threonyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|265991152|ref|ZP_06103709.1| threonyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|22654120|sp|Q8YH89|SYT_BRUME RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|17982868|gb|AAL52096.1| threonyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|260154089|gb|EEW89181.1| threonyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|263001936|gb|EEZ14511.1| threonyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
          Length = 658

 Score =  731 bits (1886), Expect = 0.0,   Method: Composition-based stats.
 Identities = 405/654 (61%), Positives = 520/654 (79%), Gaps = 3/654 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M + + L FPDGS++ +    TG+ +AESIS+SLAKKAVA A++G V DLSDP+   G +
Sbjct: 1   MSNTVSLQFPDGSVREYDASMTGAALAESISKSLAKKAVAYAVDGTVRDLSDPLGASGKV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT EDPR+L +IRH  AH++AEAVQ ++P  QV IGP+IE+GFYYDF + +PF+ D+L
Sbjct: 61  EIITREDPRALELIRHDTAHVLAEAVQELFPGTQVTIGPVIENGFYYDFARNEPFTLDDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM+EII R+ PF K+  S EKA+++F  K E+YKVE++++IPA +++ +Y QG+W
Sbjct: 121 PVIEKKMREIIQRNKPFTKEVWSREKAKQVFSDKGESYKVELVDAIPAGQDLKIYYQGDW 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPH+ STGQ+   FKLMKVAGAYWRGD+N PML+RIYGTA+    +L  YL+ LE
Sbjct: 181 FDLCRGPHMASTGQIGNSFKLMKVAGAYWRGDANNPMLTRIYGTAFANDNDLQAYLHMLE 240

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+EKRDHR+L REMDLFH  E+G GV+FWH KGWK+FQ L+SYMRR++    Y+E+NTPQ
Sbjct: 241 EAEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDSHGYQEVNTPQ 300

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           VLD+ LW+ SGHW  YR NMF V  A D   D R FALKPMNCPGHV +F HGLKSYR+L
Sbjct: 301 VLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIFKHGLKSYRDL 360

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P++LAEFG+V+R EPSG+LHGLMRVRGFTQDDAH+FCT+EQM  ECL+I++LI+S+YKDF
Sbjct: 361 PIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQMAAECLQINDLILSVYKDF 420

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE+I +KLSTRPEKRVGSD LWD AE++M  VL+ I+  S + I TG+L GEGAFYGPK
Sbjct: 421 GFEEITIKLSTRPEKRVGSDELWDRAESVMMTVLEQIRQQS-NNIKTGILPGEGAFYGPK 479

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           FEY LKDAIGR+WQCGT QVDFNLP RF AFY+ + SEK  PVMIHRA+ GS+ERF+GI+
Sbjct: 480 FEYTLKDAIGREWQCGTTQVDFNLPERFGAFYIGADSEKKQPVMIHRAICGSMERFLGIL 539

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IENF G++PLW +P+Q +V TITS A EYA+E A  LK+  L + TD RNE INYK+REH
Sbjct: 540 IENFAGHMPLWFAPVQVVVATITSDADEYAKEAAAKLKAAGLQVVTDLRNEKINYKVREH 599

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           S++K+P+I++CG +EA E+++ +RR GS   + ++L +AI  L +E+ PPD  +
Sbjct: 600 SLQKVPVILVCGKREAEEKTVNMRRLGSRDQESMTLDEAIARLCEEATPPDLLR 653


>gi|319407312|emb|CBI80953.1| Threonyl-tRNA synthetase [Bartonella sp. 1-1C]
          Length = 654

 Score =  730 bits (1885), Expect = 0.0,   Method: Composition-based stats.
 Identities = 399/653 (61%), Positives = 504/653 (77%), Gaps = 2/653 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSI 59
           M   I L+FPDGS +++    TG ++AESIS+SL KKAVA ++NG + DLSDP+ + G +
Sbjct: 1   MSRSISLSFPDGSKRDYQTETTGLELAESISKSLTKKAVAYSLNGVIRDLSDPLEQSGQV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT +DPR+L +IRH CAH++AEAVQ ++PE QV IGP+IE+GFYYDF ++QPF+ D+L
Sbjct: 61  EIITRDDPRALELIRHDCAHVLAEAVQELFPETQVTIGPVIENGFYYDFARKQPFTLDDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM+EII R+ PF K+  S EKA+++F  K E YKVE+++SIP  +++ +Y QG+W
Sbjct: 121 TTIEKKMREIIQRNQPFRKEIWSREKAKKIFSEKNELYKVELIDSIPDDQDLKVYYQGDW 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPH++STGQ+   FKLMKVAGAYWRGD+N PML+RIYGTA+  + +L  YL+ LE
Sbjct: 181 FDLCRGPHMQSTGQIGNAFKLMKVAGAYWRGDANNPMLTRIYGTAFTNENDLKAYLHMLE 240

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQ 298
           E+EKRDHR+L REMDLFH  E+  G+IFWH KGWK+FQ LISYMRR++ +  Y E+  PQ
Sbjct: 241 EAEKRDHRRLGREMDLFHFQEESPGMIFWHPKGWKMFQNLISYMRRRLDNHKYAEVQAPQ 300

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           VLD+ LW+ SGHW  Y+ NMF    A D   D  T+ALKPMNCPGHV +F HGLKSYR+L
Sbjct: 301 VLDKSLWEISGHWGWYKENMFKTIPAADDWNDECTYALKPMNCPGHVQIFKHGLKSYRDL 360

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           PVRLAEFG V+R EPSGSLHGLMRVR FTQDDAH+FCT+EQ+ +ECL I++LI+S Y DF
Sbjct: 361 PVRLAEFGLVHRYEPSGSLHGLMRVRSFTQDDAHIFCTEEQLADECLSINDLILSTYADF 420

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF++I +KLSTRPEKRVGSD LWD AENIM  VL TI+  S   +   +L GEGAFYGPK
Sbjct: 421 GFKEISLKLSTRPEKRVGSDELWDHAENIMTSVLKTIEEKSSGCVKISILPGEGAFYGPK 480

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           FEYIL DAIGR+WQCGT QVDFNLP RF AFY++  SEK  PVMIHRA+FGS+ERF+GI+
Sbjct: 481 FEYILTDAIGREWQCGTTQVDFNLPERFGAFYIDKDSEKRQPVMIHRAIFGSMERFLGIL 540

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IENF G++P WL+P Q +V TITS A EYA++I   LK+  LS + D RNE INYKIREH
Sbjct: 541 IENFAGHIPFWLAPQQIVVATITSDANEYAKKITEKLKALGLSAKLDSRNEKINYKIREH 600

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           S++KIP+I++CG +EA   S+ +RR GS     + +      L  E+ PPD +
Sbjct: 601 SLQKIPVILVCGKQEAQTNSVNVRRLGSVEQTFLPIEKVFAQLLDEATPPDLR 653


>gi|254693779|ref|ZP_05155607.1| threonyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
 gi|261214058|ref|ZP_05928339.1| threonine-tRNA ligase [Brucella abortus bv. 3 str. Tulya]
 gi|260915665|gb|EEX82526.1| threonine-tRNA ligase [Brucella abortus bv. 3 str. Tulya]
          Length = 658

 Score =  730 bits (1883), Expect = 0.0,   Method: Composition-based stats.
 Identities = 405/654 (61%), Positives = 519/654 (79%), Gaps = 3/654 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M + + L FPDGS++ +    TG+ +AESIS+SLAKKAVA A++G V DLSDP+   G +
Sbjct: 1   MSNTVSLQFPDGSVREYDASMTGAALAESISKSLAKKAVAYAVDGTVRDLSDPLGASGKV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT EDPR+L +IRH  AH++AEAVQ ++P  QV IGP+IE+GFYYDF + +PF+ D+L
Sbjct: 61  EIITREDPRALELIRHDTAHVLAEAVQELFPGTQVTIGPVIENGFYYDFARNEPFTLDDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM+EII R+ PF K+  S EKA+++F  K E+YKVE++++IPA +++ +Y QG+W
Sbjct: 121 PVIEKKMREIIQRNKPFTKEVWSREKAKQVFSDKGESYKVELVDAIPAGQDLKIYYQGDW 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPH+ STGQ+   FKLMKVAGAYWRGD+N PML+RIYGTA+    +L  YL+ LE
Sbjct: 181 FDLCRGPHMASTGQIGNSFKLMKVAGAYWRGDANNPMLTRIYGTAFANDNDLQAYLHMLE 240

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+EKRDHR+L REMDLFH  E+G GV+FWH KGWK+FQ L+SYMRR++    Y+E+NTPQ
Sbjct: 241 EAEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDSHGYQEVNTPQ 300

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           VLD+ LW+ SGHW  YR NMF V  A D   D R FALKPMNCPGHV +F HGLKSYR+L
Sbjct: 301 VLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIFKHGLKSYRDL 360

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P++LAEFG+V+R EPSG+LHGLMRVRGFTQDDAH+FCT+EQM  ECL I++LI+S+YKDF
Sbjct: 361 PIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQMAAECLHINDLILSVYKDF 420

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE+I +KLSTRPEKRVGSD LWD AE++M  VL+ I+  S + I TG+L GEGAFYGPK
Sbjct: 421 GFEEITIKLSTRPEKRVGSDELWDRAESVMMTVLEQIRQQS-NNIKTGILPGEGAFYGPK 479

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           FEY LKDAIGR+WQCGT QVDFNLP RF AFY+ + SEK  PVMIHRA+ GS+ERF+GI+
Sbjct: 480 FEYTLKDAIGREWQCGTTQVDFNLPERFGAFYIGADSEKKQPVMIHRAICGSMERFLGIL 539

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IENF G++PLW +P+Q +V TITS A EYA+E A  LK+  L + TD RNE INYK+REH
Sbjct: 540 IENFAGHMPLWFAPVQVVVATITSDADEYAKEAAAKLKAAGLQVVTDLRNEKINYKVREH 599

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           S++K+P+I++CG +EA E+++ +RR GS   + ++L +AI  L +E+ PPD  +
Sbjct: 600 SLQKVPVILVCGKREAEEKTVNMRRLGSRDQESMTLDEAIARLCEEATPPDLLR 653


>gi|254701818|ref|ZP_05163646.1| threonyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
          Length = 658

 Score =  730 bits (1883), Expect = 0.0,   Method: Composition-based stats.
 Identities = 404/654 (61%), Positives = 519/654 (79%), Gaps = 3/654 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M + + L FPDGS++ +    TG+ +AESIS+SLAKKAVA A++G V DLSDP+   G +
Sbjct: 1   MSNTVSLQFPDGSVREYDASMTGAALAESISKSLAKKAVAYAVDGTVRDLSDPLGASGKV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT EDPR+L +IRH  AH++AEAVQ ++P  QV IGP+IE+GFYYDF + +PF+ D+L
Sbjct: 61  EIITREDPRALELIRHDTAHVLAEAVQELFPGTQVTIGPVIENGFYYDFARNEPFTLDDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM+EII R+ PF K+  S EKA+++F  K E+YKVE++++IPA +++ +Y QG+W
Sbjct: 121 PVIEKKMREIIQRNKPFTKEVWSREKAKQVFSDKGESYKVELVDAIPAGQDLKIYYQGDW 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPH+ STGQ+   FKLMKVAGAYWRGD+N PML+RIYGTA+    +L  YL+ LE
Sbjct: 181 FDLCRGPHMASTGQIGNSFKLMKVAGAYWRGDANNPMLTRIYGTAFANDNDLQAYLHMLE 240

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+EKRDHR+L REMDLFH  E+G GV+FWH KGWK+FQ L+SYMRR++    Y+E+N PQ
Sbjct: 241 EAEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQKLVSYMRRRLDSHGYQEVNAPQ 300

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           VLD+ LW+ SGHW  YR NMF V  A D   D R FALKPMNCPGHV +F HGLKSYR+L
Sbjct: 301 VLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIFKHGLKSYRDL 360

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P++LAEFG+V+R EPSG+LHGLMRVRGFTQDDAH+FCT+EQM  ECL+I++LI+S+YKDF
Sbjct: 361 PIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQMAAECLRINDLILSVYKDF 420

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE+I +KLSTRPEKRVGSD LWD AE++M  VL+ I+  S + I TG+L GEGAFYGPK
Sbjct: 421 GFEEITIKLSTRPEKRVGSDELWDRAESVMMTVLEQIRQQS-NNIKTGILPGEGAFYGPK 479

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           FEY LKDAIGR+WQCGT QVDFNLP RF AFY+ + SEK  PVMIHRA+ GS+ERF+GI+
Sbjct: 480 FEYTLKDAIGREWQCGTTQVDFNLPERFGAFYIGADSEKKQPVMIHRAICGSMERFLGIL 539

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IENF G++PLW +P+Q +V TITS A EYA+E A  LK+  L + TD RNE INYK+REH
Sbjct: 540 IENFAGHMPLWFAPVQVVVATITSDADEYAKEAAAKLKAAGLQVVTDLRNEKINYKVREH 599

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           S++K+P+I++CG +EA E+++ +RR GS   + ++L +AI  L +E+ PPD  +
Sbjct: 600 SLQKVPVILVCGKREAEEKTVNMRRLGSRDQESMTLDEAIARLCEEATPPDLLR 653


>gi|62289987|ref|YP_221780.1| threonyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941]
 gi|82699915|ref|YP_414489.1| threonyl-tRNA synthetase [Brucella melitensis biovar Abortus 2308]
 gi|189024229|ref|YP_001934997.1| threonyl-tRNA synthetase [Brucella abortus S19]
 gi|254689295|ref|ZP_05152549.1| threonyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
 gi|254697431|ref|ZP_05159259.1| threonyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
 gi|254730329|ref|ZP_05188907.1| threonyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
 gi|256257545|ref|ZP_05463081.1| threonyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|260545263|ref|ZP_05821004.1| threonyl-tRNA synthetase [Brucella abortus NCTC 8038]
 gi|260883825|ref|ZP_05895439.1| threonyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|73919775|sp|Q57D65|SYT_BRUAB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|123740930|sp|Q2YQ07|SYT_BRUA2 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|238689368|sp|B2S5S6|SYT_BRUA1 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|62196119|gb|AAX74419.1| ThrS, threonyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941]
 gi|82616016|emb|CAJ11049.1| tRNA synthetases, class-II (G, H, P and S):Prolyl-tRNA synthetase,
           class IIa:Threonyl-tRNA synthetase, class IIa:TGS
           domain:A [Brucella melitensis biovar Abortus 2308]
 gi|189019801|gb|ACD72523.1| threonyl-tRNA synthetase [Brucella abortus S19]
 gi|260096670|gb|EEW80545.1| threonyl-tRNA synthetase [Brucella abortus NCTC 8038]
 gi|260873353|gb|EEX80422.1| threonyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
          Length = 658

 Score =  730 bits (1883), Expect = 0.0,   Method: Composition-based stats.
 Identities = 405/654 (61%), Positives = 519/654 (79%), Gaps = 3/654 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M + + L FPDGS++ +    TG+ +AESIS+SLAKKAVA A++G V DLSDP+   G +
Sbjct: 1   MSNTVSLQFPDGSVREYDASMTGAALAESISKSLAKKAVAYAVDGTVRDLSDPLGASGKL 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT EDPR+L +IRH  AH++AEAVQ ++P  QV IGP+IE+GFYYDF + +PF+ D+L
Sbjct: 61  EIITREDPRALELIRHDTAHVLAEAVQELFPGTQVTIGPVIENGFYYDFARNEPFTLDDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM+EII R+ PF K+  S EKA+++F  K E+YKVE++++IPA +++ +Y QG+W
Sbjct: 121 PVIEKKMREIIQRNKPFTKEVWSREKAKQVFSDKGESYKVELVDAIPAGQDLKIYYQGDW 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPH+ STGQ+   FKLMKVAGAYWRGD+N PML+RIYGTA+    +L  YL+ LE
Sbjct: 181 FDLCRGPHMASTGQIGNSFKLMKVAGAYWRGDANNPMLTRIYGTAFANDNDLQAYLHMLE 240

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+EKRDHR+L REMDLFH  E+G GV+FWH KGWK+FQ L+SYMRR++    Y+E+NTPQ
Sbjct: 241 EAEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDSHGYQEVNTPQ 300

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           VLD+ LW+ SGHW  YR NMF V  A D   D R FALKPMNCPGHV +F HGLKSYR+L
Sbjct: 301 VLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIFKHGLKSYRDL 360

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P++LAEFG+V+R EPSG+LHGLMRVRGFTQDDAH+FCT+EQM  ECL I++LI+S+YKDF
Sbjct: 361 PIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQMAAECLHINDLILSVYKDF 420

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE+I +KLSTRPEKRVGSD LWD AE++M  VL+ I+  S + I TG+L GEGAFYGPK
Sbjct: 421 GFEEITIKLSTRPEKRVGSDELWDRAESVMMTVLEQIRQQS-NNIKTGILPGEGAFYGPK 479

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           FEY LKDAIGR+WQCGT QVDFNLP RF AFY+ + SEK  PVMIHRA+ GS+ERF+GI+
Sbjct: 480 FEYTLKDAIGREWQCGTTQVDFNLPERFGAFYIGADSEKKQPVMIHRAICGSMERFLGIL 539

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IENF G++PLW +P+Q +V TITS A EYA+E A  LK+  L + TD RNE INYK+REH
Sbjct: 540 IENFAGHMPLWFAPVQVVVATITSDADEYAKEAAAKLKAAGLQVVTDLRNEKINYKVREH 599

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           S++K+P+I++CG +EA E+++ +RR GS   + ++L +AI  L +E+ PPD  +
Sbjct: 600 SLQKVPVILVCGKREAEEKTVNMRRLGSRDQESMTLDEAIARLCEEATPPDLLR 653


>gi|261752375|ref|ZP_05996084.1| threonyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
 gi|261742128|gb|EEY30054.1| threonyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
          Length = 660

 Score =  730 bits (1883), Expect = 0.0,   Method: Composition-based stats.
 Identities = 404/654 (61%), Positives = 519/654 (79%), Gaps = 3/654 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M + + L FPDGS++ +    TG+ +AESIS+SLAKKAVA A++G V DLSDP+   G +
Sbjct: 3   MSNTVSLQFPDGSVREYDASMTGAALAESISKSLAKKAVAYAVDGTVRDLSDPLGASGKV 62

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT EDPR+L +IRH  AH++AEAVQ ++P  QV IGP+IE+GFYYDF + +PF+ D+L
Sbjct: 63  EIITREDPRALELIRHDTAHVLAEAVQELFPGTQVTIGPVIENGFYYDFARNEPFTLDDL 122

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM+EII R+ PF K+  S EKA+++F  K E+YKVE++++IPA +++ +Y QG+W
Sbjct: 123 PVIEKKMREIIQRNKPFTKEVWSREKAKQVFSDKGESYKVELVDAIPAGQDLKIYYQGDW 182

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPH+ STGQ+   FKLMKVAGAYWRGD+N PML+RIYGTA+    +L  YL+ LE
Sbjct: 183 FDLCRGPHMASTGQIGNSFKLMKVAGAYWRGDANNPMLTRIYGTAFANDNDLQAYLHMLE 242

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+EKRDHR+L REMDLFH  E+G GV+FWH KGWK+FQ L+SYMRR++    Y+E+N PQ
Sbjct: 243 EAEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQKLVSYMRRRLDSHGYQEVNAPQ 302

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           VLD+ LW+ SGHW  YR NMF V  A D   D R FALKPMNCPGHV +F HGLKSYR+L
Sbjct: 303 VLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIFKHGLKSYRDL 362

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P++LAEFG+V+R EPSG+LHGLMRVRGFTQDDAH+FCT+EQM  ECL+I++LI+S+YKDF
Sbjct: 363 PIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQMAAECLRINDLILSVYKDF 422

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE+I +KLSTRPEKRVGSD LWD AE++M  VL+ I+  S + I TG+L GEGAFYGPK
Sbjct: 423 GFEEITIKLSTRPEKRVGSDELWDRAESVMMTVLEQIRQQS-NNIKTGILPGEGAFYGPK 481

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           FEY LKDAIGR+WQCGT QVDFNLP RF AFY+ + SEK  PVMIHRA+ GS+ERF+GI+
Sbjct: 482 FEYTLKDAIGREWQCGTTQVDFNLPERFGAFYIGADSEKKQPVMIHRAICGSMERFLGIL 541

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IENF G++PLW +P+Q +V TITS A EYA+E A  LK+  L + TD RNE INYK+REH
Sbjct: 542 IENFAGHMPLWFAPVQVVVATITSDADEYAKEAAAKLKAAGLQVVTDLRNEKINYKVREH 601

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           S++K+P+I++CG +EA E+++ +RR GS   + ++L +AI  L +E+ PPD  +
Sbjct: 602 SLQKVPVILVCGKREAEEKTVNMRRLGSRDQESMTLDEAIARLCEEATPPDLLR 655


>gi|260754807|ref|ZP_05867155.1| threonine-tRNA ligase [Brucella abortus bv. 6 str. 870]
 gi|260758029|ref|ZP_05870377.1| threonine-tRNA ligase [Brucella abortus bv. 4 str. 292]
 gi|260761852|ref|ZP_05874195.1| threonine-tRNA ligase [Brucella abortus bv. 2 str. 86/8/59]
 gi|297248387|ref|ZP_06932105.1| threonyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196]
 gi|260668347|gb|EEX55287.1| threonine-tRNA ligase [Brucella abortus bv. 4 str. 292]
 gi|260672284|gb|EEX59105.1| threonine-tRNA ligase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260674915|gb|EEX61736.1| threonine-tRNA ligase [Brucella abortus bv. 6 str. 870]
 gi|297175556|gb|EFH34903.1| threonyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196]
          Length = 660

 Score =  729 bits (1882), Expect = 0.0,   Method: Composition-based stats.
 Identities = 405/654 (61%), Positives = 519/654 (79%), Gaps = 3/654 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M + + L FPDGS++ +    TG+ +AESIS+SLAKKAVA A++G V DLSDP+   G +
Sbjct: 3   MSNTVSLQFPDGSVREYDASMTGAALAESISKSLAKKAVAYAVDGTVRDLSDPLGASGKL 62

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT EDPR+L +IRH  AH++AEAVQ ++P  QV IGP+IE+GFYYDF + +PF+ D+L
Sbjct: 63  EIITREDPRALELIRHDTAHVLAEAVQELFPGTQVTIGPVIENGFYYDFARNEPFTLDDL 122

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM+EII R+ PF K+  S EKA+++F  K E+YKVE++++IPA +++ +Y QG+W
Sbjct: 123 PVIEKKMREIIQRNKPFTKEVWSREKAKQVFSDKGESYKVELVDAIPAGQDLKIYYQGDW 182

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPH+ STGQ+   FKLMKVAGAYWRGD+N PML+RIYGTA+    +L  YL+ LE
Sbjct: 183 FDLCRGPHMASTGQIGNSFKLMKVAGAYWRGDANNPMLTRIYGTAFANDNDLQAYLHMLE 242

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+EKRDHR+L REMDLFH  E+G GV+FWH KGWK+FQ L+SYMRR++    Y+E+NTPQ
Sbjct: 243 EAEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDSHGYQEVNTPQ 302

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           VLD+ LW+ SGHW  YR NMF V  A D   D R FALKPMNCPGHV +F HGLKSYR+L
Sbjct: 303 VLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIFKHGLKSYRDL 362

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P++LAEFG+V+R EPSG+LHGLMRVRGFTQDDAH+FCT+EQM  ECL I++LI+S+YKDF
Sbjct: 363 PIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQMAAECLHINDLILSVYKDF 422

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE+I +KLSTRPEKRVGSD LWD AE++M  VL+ I+  S + I TG+L GEGAFYGPK
Sbjct: 423 GFEEITIKLSTRPEKRVGSDELWDRAESVMMTVLEQIRQQS-NNIKTGILPGEGAFYGPK 481

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           FEY LKDAIGR+WQCGT QVDFNLP RF AFY+ + SEK  PVMIHRA+ GS+ERF+GI+
Sbjct: 482 FEYTLKDAIGREWQCGTTQVDFNLPERFGAFYIGADSEKKQPVMIHRAICGSMERFLGIL 541

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IENF G++PLW +P+Q +V TITS A EYA+E A  LK+  L + TD RNE INYK+REH
Sbjct: 542 IENFAGHMPLWFAPVQVVVATITSDADEYAKEAAAKLKAAGLQVVTDLRNEKINYKVREH 601

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           S++K+P+I++CG +EA E+++ +RR GS   + ++L +AI  L +E+ PPD  +
Sbjct: 602 SLQKVPVILVCGKREAEEKTVNMRRLGSRDQESMTLDEAIARLCEEATPPDLLR 655


>gi|85716379|ref|ZP_01047351.1| threonyl-tRNA synthetase [Nitrobacter sp. Nb-311A]
 gi|85696736|gb|EAQ34622.1| threonyl-tRNA synthetase [Nitrobacter sp. Nb-311A]
          Length = 679

 Score =  729 bits (1882), Expect = 0.0,   Method: Composition-based stats.
 Identities = 390/652 (59%), Positives = 505/652 (77%), Gaps = 3/652 (0%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
            +I LTFPDG+ + FP   TG+++A+ IS SLAK+ VA+A++G V DL+DP+  +  IE 
Sbjct: 25  DNITLTFPDGAQREFPKSTTGAEIAKGISPSLAKRTVAMALDGVVSDLADPIERDAGIEF 84

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           I+ +DPR+L +IRH  AH++AEAVQ++WP  QV IGP+IE+GFYYDF + +PFS ++ A 
Sbjct: 85  ISRDDPRALELIRHDAAHVLAEAVQTLWPGTQVTIGPVIENGFYYDFFRNEPFSVEDFAA 144

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEKKM+EIIARD PF K     EK +++F  K E +KVE++++IP  E + +Y QG+WFD
Sbjct: 145 IEKKMREIIARDKPFTKDVWDREKTKQVFRDKGETFKVELVDAIPGNEPIKIYYQGDWFD 204

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ STG++   FKLMKVAGAYWRGDSN PML+RIYGTA+  Q +L  YL  +EE+
Sbjct: 205 LCRGPHMTSTGKIGNAFKLMKVAGAYWRGDSNNPMLTRIYGTAFANQADLDAYLKQIEEA 264

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLD 301
           EKRDHRKL RE+DLFH  E+G GV+FWH KGW IFQ +I+YMRR++ +DY+E+N PQ+LD
Sbjct: 265 EKRDHRKLGRELDLFHFQEEGPGVVFWHAKGWTIFQAVIAYMRRRLAEDYDEVNAPQMLD 324

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW+ YR NMFA + A D  +D R F +KPMNCPGHV +F HGLKSYR+LP+R
Sbjct: 325 KALWETSGHWEWYRENMFAAQSAGDEAEDKRWFTIKPMNCPGHVQLFKHGLKSYRDLPLR 384

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFG V+R EPSG++HGLMRVRGFTQDDAHVFCT+EQ+ +ECLKI+ LI+S Y DFGF+
Sbjct: 385 LAEFGVVHRYEPSGAMHGLMRVRGFTQDDAHVFCTEEQLADECLKINELILSTYADFGFD 444

Query: 422 -KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
            ++ VKLSTRPEKRVGSDA WD AE +M  VL  I  +S +RI T +  GEGAFYGPKFE
Sbjct: 445 GELTVKLSTRPEKRVGSDAAWDHAEAVMADVLKRI-AASNNRIKTEINPGEGAFYGPKFE 503

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           Y+L+DAIGRDWQCGT QVDFNLP RF AFY+++   K  PVM+HRA+ GSIERFIGI+IE
Sbjct: 504 YVLRDAIGRDWQCGTTQVDFNLPERFGAFYIDADGGKKAPVMVHRAICGSIERFIGILIE 563

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +F G+ PLWL+P+QA+VTTITS   EYA+ +A+  +   L +E D RNE INYK+REHS+
Sbjct: 564 HFAGHFPLWLAPVQAVVTTITSDGDEYAKAVASAARRAGLRVELDLRNEKINYKVREHSL 623

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
            KIP +++ G KEA   S+ IRR GS   + +   +AI  L +E++PPD ++
Sbjct: 624 AKIPALLVVGKKEAETESVSIRRLGSDGQKVMPTGEAIAALVEEAIPPDIRR 675


>gi|23501949|ref|NP_698076.1| threonyl-tRNA synthetase [Brucella suis 1330]
 gi|161619021|ref|YP_001592908.1| threonyl-tRNA synthetase [Brucella canis ATCC 23365]
 gi|163843337|ref|YP_001627741.1| threonyl-tRNA synthetase [Brucella suis ATCC 23445]
 gi|254704361|ref|ZP_05166189.1| threonyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
 gi|254710151|ref|ZP_05171962.1| threonyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|254714150|ref|ZP_05175961.1| threonyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|254716792|ref|ZP_05178603.1| threonyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|256031646|ref|ZP_05445260.1| threonyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
 gi|256061156|ref|ZP_05451310.1| threonyl-tRNA synthetase [Brucella neotomae 5K33]
 gi|256369496|ref|YP_003107004.1| threonyl-tRNA synthetase [Brucella microti CCM 4915]
 gi|260168776|ref|ZP_05755587.1| threonyl-tRNA synthetase [Brucella sp. F5/99]
 gi|260566393|ref|ZP_05836863.1| threonyl-tRNA synthetase [Brucella suis bv. 4 str. 40]
 gi|261218590|ref|ZP_05932871.1| threonyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|261317705|ref|ZP_05956902.1| threonyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|261321913|ref|ZP_05961110.1| threonyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|261325162|ref|ZP_05964359.1| threonyl-tRNA synthetase [Brucella neotomae 5K33]
 gi|261755033|ref|ZP_05998742.1| threonyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
 gi|261758257|ref|ZP_06001966.1| threonyl-tRNA synthetase [Brucella sp. F5/99]
 gi|265988738|ref|ZP_06101295.1| threonyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
 gi|38258386|sp|Q8G0L8|SYT_BRUSU RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|189083599|sp|A9M582|SYT_BRUC2 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|189083600|sp|B0CGM0|SYT_BRUSI RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|23347895|gb|AAN29991.1| threonyl-tRNA synthetase [Brucella suis 1330]
 gi|161335832|gb|ABX62137.1| threonyl-tRNA synthetase [Brucella canis ATCC 23365]
 gi|163674060|gb|ABY38171.1| threonyl-tRNA synthetase [Brucella suis ATCC 23445]
 gi|255999656|gb|ACU48055.1| threonyl-tRNA synthetase [Brucella microti CCM 4915]
 gi|260155911|gb|EEW90991.1| threonyl-tRNA synthetase [Brucella suis bv. 4 str. 40]
 gi|260923679|gb|EEX90247.1| threonyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|261294603|gb|EEX98099.1| threonyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|261296928|gb|EEY00425.1| threonyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|261301142|gb|EEY04639.1| threonyl-tRNA synthetase [Brucella neotomae 5K33]
 gi|261738241|gb|EEY26237.1| threonyl-tRNA synthetase [Brucella sp. F5/99]
 gi|261744786|gb|EEY32712.1| threonyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
 gi|264660935|gb|EEZ31196.1| threonyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
          Length = 658

 Score =  729 bits (1882), Expect = 0.0,   Method: Composition-based stats.
 Identities = 404/654 (61%), Positives = 519/654 (79%), Gaps = 3/654 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M + + L FPDGS++ +    TG+ +AESIS+SLAKKAVA A++G V DLSDP+   G +
Sbjct: 1   MSNTVSLQFPDGSVREYDASMTGAALAESISKSLAKKAVAYAVDGTVRDLSDPLGASGKV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT EDPR+L +IRH  AH++AEAVQ ++P  QV IGP+IE+GFYYDF + +PF+ D+L
Sbjct: 61  EIITREDPRALELIRHDTAHVLAEAVQELFPGTQVTIGPVIENGFYYDFARNEPFTLDDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM+EII R+ PF K+  S EKA+++F  K E+YKVE++++IPA +++ +Y QG+W
Sbjct: 121 PVIEKKMREIIQRNKPFTKEVWSREKAKQVFSDKGESYKVELVDAIPAGQDLKIYYQGDW 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPH+ STGQ+   FKLMKVAGAYWRGD+N PML+RIYGTA+    +L  YL+ LE
Sbjct: 181 FDLCRGPHMASTGQIGNSFKLMKVAGAYWRGDANNPMLTRIYGTAFANDNDLQAYLHMLE 240

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+EKRDHR+L REMDLFH  E+G GV+FWH KGWK+FQ L+SYMRR++    Y+E+N PQ
Sbjct: 241 EAEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDSHGYQEVNAPQ 300

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           VLD+ LW+ SGHW  YR NMF V  A D   D R FALKPMNCPGHV +F HGLKSYR+L
Sbjct: 301 VLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIFKHGLKSYRDL 360

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P++LAEFG+V+R EPSG+LHGLMRVRGFTQDDAH+FCT+EQM  ECL+I++LI+S+YKDF
Sbjct: 361 PIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQMAAECLRINDLILSVYKDF 420

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE+I +KLSTRPEKRVGSD LWD AE++M  VL+ I+  S + I TG+L GEGAFYGPK
Sbjct: 421 GFEEITIKLSTRPEKRVGSDELWDRAESVMMTVLEQIRQQS-NNIKTGILPGEGAFYGPK 479

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           FEY LKDAIGR+WQCGT QVDFNLP RF AFY+ + SEK  PVMIHRA+ GS+ERF+GI+
Sbjct: 480 FEYTLKDAIGREWQCGTTQVDFNLPERFGAFYIGADSEKKQPVMIHRAICGSMERFLGIL 539

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IENF G++PLW +P+Q +V TITS A EYA+E A  LK+  L + TD RNE INYK+REH
Sbjct: 540 IENFAGHMPLWFAPVQVVVATITSDADEYAKEAAAKLKAAGLQVVTDLRNEKINYKVREH 599

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           S++K+P+I++CG +EA E+++ +RR GS   + ++L +AI  L +E+ PPD  +
Sbjct: 600 SLQKVPVILVCGKREAEEKTVNMRRLGSRDQESMTLDEAIARLCEEATPPDLLR 653


>gi|225852573|ref|YP_002732806.1| threonyl-tRNA synthetase [Brucella melitensis ATCC 23457]
 gi|256263936|ref|ZP_05466468.1| threonyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9]
 gi|254783511|sp|C0RJ44|SYT_BRUMB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|225640938|gb|ACO00852.1| threonyl-tRNA synthetase [Brucella melitensis ATCC 23457]
 gi|263094080|gb|EEZ18002.1| threonyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9]
          Length = 658

 Score =  729 bits (1882), Expect = 0.0,   Method: Composition-based stats.
 Identities = 404/654 (61%), Positives = 519/654 (79%), Gaps = 3/654 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M + + L FPDGS++ +    TG+ +AESIS+SLAKKAVA A++G V DLSDP+   G +
Sbjct: 1   MSNTVSLQFPDGSVREYDASMTGAALAESISKSLAKKAVAYAVDGTVRDLSDPLGASGKV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT EDPR+L +IRH  AH++AEAVQ ++P  QV IGP+IE+GFYYDF + +PF+ D+L
Sbjct: 61  EIITREDPRALELIRHDTAHVLAEAVQELFPGTQVTIGPVIENGFYYDFARNEPFTLDDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM+EII R+ PF K+  S EKA+++F  K E+YKVE++++IPA +++ +Y QG+W
Sbjct: 121 PVIEKKMREIIQRNKPFTKEVWSREKAKQVFSDKGESYKVELVDAIPAGQDLKIYYQGDW 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPH+ STGQ+   FKLMKVAGAYWRGD+N PML+RIYGTA+    +L  YL+ LE
Sbjct: 181 FDLCRGPHMASTGQIGNSFKLMKVAGAYWRGDANNPMLTRIYGTAFANDNDLQAYLHMLE 240

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+EKRDHR+L REMDLFH  E+G GV+FWH KGWK+FQ L+SYMRR++    Y+E+NTPQ
Sbjct: 241 EAEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDSHGYQEVNTPQ 300

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           VLD+ LW+ SGHW  YR NMF V  A D   D R FALKPMNCPGHV +F HGLKSYR+L
Sbjct: 301 VLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIFKHGLKSYRDL 360

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P++LAEFG+V+R EPSG+LHGLMRVRGFTQDDAH+FCT+EQM  ECL+I++ I+S+YKDF
Sbjct: 361 PIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQMAAECLQINDHILSVYKDF 420

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE+I +KLSTRPEKRVGSD LWD AE++M  VL+ I+  S + I TG+L GEGAFYGPK
Sbjct: 421 GFEEITIKLSTRPEKRVGSDELWDRAESVMMTVLEQIRQQS-NNIKTGILPGEGAFYGPK 479

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           FEY LKDAIGR+WQCGT QVDFNLP RF AFY+ + SEK  PVMIHRA+ GS+ERF+GI+
Sbjct: 480 FEYTLKDAIGREWQCGTTQVDFNLPERFGAFYIGADSEKKQPVMIHRAICGSMERFLGIL 539

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IENF G++PLW +P+Q +V TITS A EYA+E A  LK+  L + TD RNE INYK+REH
Sbjct: 540 IENFAGHMPLWFAPVQVVVATITSDADEYAKEAAAKLKAAGLQVVTDLRNEKINYKVREH 599

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           S++K+P+I++CG +EA E+++ +RR GS   + ++L +AI  L +E+ PPD  +
Sbjct: 600 SLQKVPVILVCGKREAEEKTVNMRRLGSRDQESMTLDEAIARLCEEATPPDLLR 653


>gi|326409092|gb|ADZ66157.1| threonyl-tRNA synthetase [Brucella melitensis M28]
          Length = 660

 Score =  729 bits (1882), Expect = 0.0,   Method: Composition-based stats.
 Identities = 404/654 (61%), Positives = 519/654 (79%), Gaps = 3/654 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M + + L FPDGS++ +    TG+ +AESIS+SLAKKAVA A++G V DLSDP+   G +
Sbjct: 3   MSNTVSLQFPDGSVREYDASMTGAALAESISKSLAKKAVAYAVDGTVRDLSDPLGASGKV 62

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT EDPR+L +IRH  AH++AEAVQ ++P  QV IGP+IE+GFYYDF + +PF+ D+L
Sbjct: 63  EIITREDPRALELIRHDTAHVLAEAVQELFPGTQVTIGPVIENGFYYDFARNEPFTLDDL 122

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM+EII R+ PF K+  S EKA+++F  K E+YKVE++++IPA +++ +Y QG+W
Sbjct: 123 PVIEKKMREIIQRNKPFTKEVWSREKAKQVFSDKGESYKVELVDAIPAGQDLKIYYQGDW 182

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPH+ STGQ+   FKLMKVAGAYWRGD+N PML+RIYGTA+    +L  YL+ LE
Sbjct: 183 FDLCRGPHMASTGQIGNSFKLMKVAGAYWRGDANNPMLTRIYGTAFANDNDLQAYLHMLE 242

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+EKRDHR+L REMDLFH  E+G GV+FWH KGWK+FQ L+SYMRR++    Y+E+NTPQ
Sbjct: 243 EAEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDSHGYQEVNTPQ 302

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           VLD+ LW+ SGHW  YR NMF V  A D   D R FALKPMNCPGHV +F HGLKSYR+L
Sbjct: 303 VLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIFKHGLKSYRDL 362

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P++LAEFG+V+R EPSG+LHGLMRVRGFTQDDAH+FCT+EQM  ECL+I++ I+S+YKDF
Sbjct: 363 PIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQMAAECLQINDHILSVYKDF 422

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE+I +KLSTRPEKRVGSD LWD AE++M  VL+ I+  S + I TG+L GEGAFYGPK
Sbjct: 423 GFEEITIKLSTRPEKRVGSDELWDRAESVMMTVLEQIRQQS-NNIKTGILPGEGAFYGPK 481

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           FEY LKDAIGR+WQCGT QVDFNLP RF AFY+ + SEK  PVMIHRA+ GS+ERF+GI+
Sbjct: 482 FEYTLKDAIGREWQCGTTQVDFNLPERFGAFYIGADSEKKQPVMIHRAICGSMERFLGIL 541

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IENF G++PLW +P+Q +V TITS A EYA+E A  LK+  L + TD RNE INYK+REH
Sbjct: 542 IENFAGHMPLWFAPVQVVVATITSDADEYAKEAAAKLKAAGLQVVTDLRNEKINYKVREH 601

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           S++K+P+I++CG +EA E+++ +RR GS   + ++L +AI  L +E+ PPD  +
Sbjct: 602 SLQKVPVILVCGKREAEEKTVNMRRLGSRDQESMTLDEAIARLCEEATPPDLLR 655


>gi|256113621|ref|ZP_05454441.1| threonyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|265994988|ref|ZP_06107545.1| threonyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|262766101|gb|EEZ11890.1| threonyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
          Length = 658

 Score =  729 bits (1882), Expect = 0.0,   Method: Composition-based stats.
 Identities = 404/654 (61%), Positives = 519/654 (79%), Gaps = 3/654 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M + + L FPDGS++ +    TG+ +AESIS+SLAKKAVA A++G V DLSDP+   G +
Sbjct: 1   MSNTVSLQFPDGSVREYDASMTGAALAESISKSLAKKAVAYAVDGTVRDLSDPLGASGKV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT EDPR+L +IRH  AH++AEAVQ ++P  QV IGP+IE+GFYYDF + +PF+ D+L
Sbjct: 61  EIITREDPRALELIRHDTAHVLAEAVQELFPGTQVTIGPVIENGFYYDFARNEPFTLDDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM+EII R+ PF K+  S EKA+++F  K E+YKVE++++IPA +++ +Y QG+W
Sbjct: 121 PVIEKKMREIIQRNKPFTKEVWSREKAKQVFSDKGESYKVELVDAIPAGQDLKIYYQGDW 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPH+ STGQ+   FKLMKVAGAYWRGD+N PML+RIYGTA+    +L  YL+ LE
Sbjct: 181 FDLCRGPHMASTGQIGNSFKLMKVAGAYWRGDANNPMLTRIYGTAFANDNDLQAYLHMLE 240

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+EKRDHR+L REMDLFH  E+G GV+FWH KGWK+FQ L+SYMRR++    Y+E+NTPQ
Sbjct: 241 EAEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDSHGYQEVNTPQ 300

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           VLD+ LW+ SGHW  YR NMF V  A D   D   FALKPMNCPGHV +F HGLKSYR+L
Sbjct: 301 VLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDHVFALKPMNCPGHVQIFKHGLKSYRDL 360

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P++LAEFG+V+R EPSG+LHGLMRVRGFTQDDAH+FCT+EQM  ECL+I++LI+S+YKDF
Sbjct: 361 PIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQMAAECLQINDLILSVYKDF 420

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE+I +KLSTRPEKRVGSD LWD AE++M  VL+ I+  S + I TG+L GEGAFYGPK
Sbjct: 421 GFEEITIKLSTRPEKRVGSDELWDRAESVMMTVLEQIRQQS-NNIKTGILPGEGAFYGPK 479

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           FEY LKDAIGR+WQCGT QVDFNLP RF AFY+ + SEK  PVMIHRA+ GS+ERF+GI+
Sbjct: 480 FEYTLKDAIGREWQCGTTQVDFNLPERFGAFYIGADSEKKQPVMIHRAICGSMERFLGIL 539

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IENF G++PLW +P+Q +V TITS A EYA+E A  LK+  L + TD RNE INYK+REH
Sbjct: 540 IENFAGHMPLWFAPVQVVVATITSDADEYAKEAAAKLKAAGLQVVTDLRNEKINYKVREH 599

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           S++K+P+I++CG +EA E+++ +RR GS   + ++L +AI  L +E+ PPD  +
Sbjct: 600 SLQKVPVILVCGKREAEEKTVNMRRLGSRDQESMTLDEAIARLCEEATPPDLLR 653


>gi|306841798|ref|ZP_07474483.1| threonyl-tRNA synthetase [Brucella sp. BO2]
 gi|306288128|gb|EFM59518.1| threonyl-tRNA synthetase [Brucella sp. BO2]
          Length = 661

 Score =  729 bits (1881), Expect = 0.0,   Method: Composition-based stats.
 Identities = 404/654 (61%), Positives = 519/654 (79%), Gaps = 3/654 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M + + L FPDGS++ +    TG+ +AESIS+SLAKKAVA A++G V DLSDP+   G +
Sbjct: 4   MSNTVSLQFPDGSVREYDASMTGAALAESISKSLAKKAVAYAVDGTVRDLSDPLGASGKV 63

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT EDPR+L +IRH  AH++AEAVQ ++P  QV IGP+IE+GFYYDF + +PF+ D+L
Sbjct: 64  EIITREDPRALELIRHDTAHVLAEAVQELFPGTQVTIGPVIENGFYYDFARNEPFTLDDL 123

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM+EII R+ PF K+  S EKA+++F  K E+YKVE++++IPA +++ +Y QG+W
Sbjct: 124 PMIEKKMREIIQRNKPFTKEVWSREKAKQVFSDKGESYKVELVDAIPAGQDLKIYYQGDW 183

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPH+ STGQ+   FKLMKVAGAYWRGD+N PML+RIYGTA+    +L  YL+ LE
Sbjct: 184 FDLCRGPHMASTGQIGNSFKLMKVAGAYWRGDANNPMLTRIYGTAFANDNDLQAYLHMLE 243

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+EKRDHR+L REMDLFH  E+G GV+FWH KGWK+FQ L+SYMRR++    Y+E+N PQ
Sbjct: 244 EAEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDSHGYQEVNAPQ 303

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           VLD+ LW+ SGHW  YR NMF V  A D   D R FALKPMNCPGHV +F HGLKSYR+L
Sbjct: 304 VLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIFKHGLKSYRDL 363

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P++LAEFG+V+R EPSG+LHGLMRVRGFTQDDAH+FCT+EQM  ECL+I++LI+S+YKDF
Sbjct: 364 PIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQMAAECLRINDLILSVYKDF 423

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE+I +KLSTRPEKRVGSD LWD AE++M  VL+ I+  S + I TG+L GEGAFYGPK
Sbjct: 424 GFEEITIKLSTRPEKRVGSDELWDRAESVMMTVLEQIRQQS-NNIKTGILPGEGAFYGPK 482

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           FEY LKDAIGR+WQCGT QVDFNLP RF AFY+ + SEK  PVMIHRA+ GS+ERF+GI+
Sbjct: 483 FEYTLKDAIGREWQCGTTQVDFNLPERFGAFYIGADSEKKQPVMIHRAICGSMERFLGIL 542

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IENF G++PLW +P+Q +V TITS A EYA+E A  LK+  L + TD RNE INYK+REH
Sbjct: 543 IENFAGHMPLWFAPVQVVVATITSDADEYAKEAAAKLKAAGLQVVTDLRNEKINYKVREH 602

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           S++K+P+I++CG +EA E+++ +RR GS   + ++L +AI  L +E+ PPD  +
Sbjct: 603 SLQKVPVILVCGKREAEEKTVNMRRLGSRDQESMTLDEAIARLCEEATPPDLLR 656


>gi|256159790|ref|ZP_05457533.1| threonyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|256255048|ref|ZP_05460584.1| threonyl-tRNA synthetase [Brucella ceti B1/94]
 gi|261222239|ref|ZP_05936520.1| threonyl-tRNA synthetase [Brucella ceti B1/94]
 gi|265998203|ref|ZP_06110760.1| threonyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|260920823|gb|EEX87476.1| threonyl-tRNA synthetase [Brucella ceti B1/94]
 gi|262552671|gb|EEZ08661.1| threonyl-tRNA synthetase [Brucella ceti M490/95/1]
          Length = 658

 Score =  729 bits (1881), Expect = 0.0,   Method: Composition-based stats.
 Identities = 404/654 (61%), Positives = 519/654 (79%), Gaps = 3/654 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M + + L FPDGS++ +    TG+ +AESIS+SLAKKAVA A++G V DLSDP+   G +
Sbjct: 1   MSNTVSLQFPDGSVREYDASMTGAALAESISKSLAKKAVAYAVDGTVRDLSDPLGASGKV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT EDPR+L +IRH  AH++AEAVQ ++P  QV IGP+IE+GFYYDF + +PF+ D+L
Sbjct: 61  EIITREDPRALELIRHDTAHVLAEAVQELFPGTQVTIGPVIENGFYYDFARNEPFTLDDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM+EII R+ PF K+  S EKA+++F  K E+YKVE++++IPA +++ +Y QG+W
Sbjct: 121 PVIEKKMREIIQRNKPFTKEVWSREKAKQVFSDKGESYKVELVDAIPAGQDLKIYYQGDW 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPH+ STGQ+   FKLMKVAGAYWRGD+N PML+RIYGTA+    +L  YL+ LE
Sbjct: 181 FDLCRGPHMASTGQIGNSFKLMKVAGAYWRGDANNPMLTRIYGTAFANDNDLQAYLHMLE 240

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+EKRDHR+L REMDLFH  E+G GV+FWH KGWK+FQ L+SYMRR++    Y+E+N PQ
Sbjct: 241 EAEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDSHGYQEVNAPQ 300

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           VLD+ LW+ SGHW  YR NMF V  A D   D R FALKPMNCPGHV +F HGLKSYR+L
Sbjct: 301 VLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIFKHGLKSYRDL 360

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P++LAEFG+V+R EPSG+LHGLMRVRGFTQDDAH+FCT+EQM  ECL+I++LI+S+YKDF
Sbjct: 361 PIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQMAAECLRINDLILSVYKDF 420

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE+I +KLSTRPEKRVGSD LWD AE++M  VL+ I+  S + I TG+L GEGAFYGPK
Sbjct: 421 GFEEITIKLSTRPEKRVGSDELWDRAESVMMTVLEQIRQQS-NNIKTGILPGEGAFYGPK 479

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           FEY LKDAIGR+WQCGT QVDFNLP RF AFY+ + SEK  PVMIHRA+ GS+ERF+GI+
Sbjct: 480 FEYTLKDAIGREWQCGTTQVDFNLPKRFGAFYIGADSEKKQPVMIHRAICGSMERFLGIL 539

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IENF G++PLW +P+Q +V TITS A EYA+E A  LK+  L + TD RNE INYK+REH
Sbjct: 540 IENFAGHMPLWFAPVQVVVATITSDADEYAKEAAAKLKAAGLQVVTDLRNEKINYKVREH 599

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           S++K+P+I++CG +EA E+++ +RR GS   + ++L +AI  L +E+ PPD  +
Sbjct: 600 SLQKVPVILVCGKREAEEKTVNMRRLGSRDQESMTLDEAIARLCEEATPPDLLR 653


>gi|326538797|gb|ADZ87012.1| threonyl-tRNA synthetase [Brucella melitensis M5-90]
          Length = 661

 Score =  729 bits (1881), Expect = 0.0,   Method: Composition-based stats.
 Identities = 404/654 (61%), Positives = 519/654 (79%), Gaps = 3/654 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M + + L FPDGS++ +    TG+ +AESIS+SLAKKAVA A++G V DLSDP+   G +
Sbjct: 4   MSNTVSLQFPDGSVREYDASMTGAALAESISKSLAKKAVAYAVDGTVRDLSDPLGASGKV 63

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT EDPR+L +IRH  AH++AEAVQ ++P  QV IGP+IE+GFYYDF + +PF+ D+L
Sbjct: 64  EIITREDPRALELIRHDTAHVLAEAVQELFPGTQVTIGPVIENGFYYDFARNEPFTLDDL 123

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM+EII R+ PF K+  S EKA+++F  K E+YKVE++++IPA +++ +Y QG+W
Sbjct: 124 PVIEKKMREIIQRNKPFTKEVWSREKAKQVFSDKGESYKVELVDAIPAGQDLKIYYQGDW 183

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPH+ STGQ+   FKLMKVAGAYWRGD+N PML+RIYGTA+    +L  YL+ LE
Sbjct: 184 FDLCRGPHMASTGQIGNSFKLMKVAGAYWRGDANNPMLTRIYGTAFANDNDLQAYLHMLE 243

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+EKRDHR+L REMDLFH  E+G GV+FWH KGWK+FQ L+SYMRR++    Y+E+NTPQ
Sbjct: 244 EAEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDSHGYQEVNTPQ 303

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           VLD+ LW+ SGHW  YR NMF V  A D   D R FALKPMNCPGHV +F HGLKSYR+L
Sbjct: 304 VLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIFKHGLKSYRDL 363

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P++LAEFG+V+R EPSG+LHGLMRVRGFTQDDAH+FCT+EQM  ECL+I++ I+S+YKDF
Sbjct: 364 PIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQMAAECLQINDHILSVYKDF 423

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE+I +KLSTRPEKRVGSD LWD AE++M  VL+ I+  S + I TG+L GEGAFYGPK
Sbjct: 424 GFEEITIKLSTRPEKRVGSDELWDRAESVMMTVLEQIRQQS-NNIKTGILPGEGAFYGPK 482

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           FEY LKDAIGR+WQCGT QVDFNLP RF AFY+ + SEK  PVMIHRA+ GS+ERF+GI+
Sbjct: 483 FEYTLKDAIGREWQCGTTQVDFNLPERFGAFYIGADSEKKQPVMIHRAICGSMERFLGIL 542

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IENF G++PLW +P+Q +V TITS A EYA+E A  LK+  L + TD RNE INYK+REH
Sbjct: 543 IENFAGHMPLWFAPVQVVVATITSDADEYAKEAAAKLKAAGLQVVTDLRNEKINYKVREH 602

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           S++K+P+I++CG +EA E+++ +RR GS   + ++L +AI  L +E+ PPD  +
Sbjct: 603 SLQKVPVILVCGKREAEEKTVNMRRLGSRDQESMTLDEAIARLCEEATPPDLLR 656


>gi|307945488|ref|ZP_07660824.1| threonyl-tRNA synthetase [Roseibium sp. TrichSKD4]
 gi|307771361|gb|EFO30586.1| threonyl-tRNA synthetase [Roseibium sp. TrichSKD4]
          Length = 656

 Score =  728 bits (1880), Expect = 0.0,   Method: Composition-based stats.
 Identities = 397/656 (60%), Positives = 513/656 (78%), Gaps = 8/656 (1%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I+LTFPD S++ F    +G+DVA SIS+SLAKKAVAVA++G++ DLSD + +  +IEI+
Sbjct: 1   MIQLTFPDNSVREFEDGVSGADVAASISKSLAKKAVAVALDGELADLSDTISKNSTIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFS------- 115
           T +DPR++ +IRH  AH++AEAVQ +WP  QV IGP+IE+GFYYDF +  P +       
Sbjct: 61  TRDDPRAVELIRHDAAHVLAEAVQELWPGTQVTIGPVIENGFYYDFKRVHPDTKENWPFA 120

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           +D+L  IEKKM+EII R+ PF K+  S E+A+++F    E YKVE++++IP  +++ +Y+
Sbjct: 121 TDDLEVIEKKMREIIQRNQPFTKELWSREEAKKVFAEMGEDYKVELVDAIPEDQDIKIYK 180

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
           QG+WFDLCRGPH+ +TG++   FKLMKVAGAYWRGDSN PMLSRIYGTA+   ++L  YL
Sbjct: 181 QGDWFDLCRGPHMDATGRIGTAFKLMKVAGAYWRGDSNNPMLSRIYGTAFANDKDLKAYL 240

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEIN 295
           + LEE+EKRDHRKL REMDLFH  E+G GV+FWH KGW +FQ L+SYMRR++  DY+E+N
Sbjct: 241 HMLEEAEKRDHRKLGREMDLFHFQEEGPGVVFWHDKGWTLFQNLVSYMRRRLSGDYQEVN 300

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
            PQVL   LW+ SGHW  Y+ NMFAV+ AD   +D   FALKPMNCPGH+ +F HGLKSY
Sbjct: 301 APQVLSTKLWETSGHWAWYKENMFAVQGADPEDEDTHVFALKPMNCPGHIQIFKHGLKSY 360

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           R+LP+R+AEFG V+R EPSG++HGLMRVRGFTQDDAHVFCT EQM  ECLKI++LI+S+Y
Sbjct: 361 RDLPLRMAEFGVVHRYEPSGAMHGLMRVRGFTQDDAHVFCTDEQMAEECLKINDLILSVY 420

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           + FGFEKI+VKLSTRPEKRVGSD LWD AE +M  VL+ IK  S  R+ T +L GEGAFY
Sbjct: 421 EHFGFEKIVVKLSTRPEKRVGSDELWDHAEEVMGKVLEQIKEQSGGRVETDILPGEGAFY 480

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPKFEY L+DAIGR+WQCGT QVDFNLP RF AFYV+++ EK  PVMIHRA+ GS+ERF+
Sbjct: 481 GPKFEYTLRDAIGREWQCGTTQVDFNLPERFGAFYVDNNGEKQTPVMIHRAICGSMERFL 540

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
           GI+IEN+ G+ PLWL+P+Q +V TITS A +Y +E+A  L++  L +ETDFRNE INYK+
Sbjct: 541 GILIENYSGHFPLWLAPLQVVVATITSEADDYGREVAGKLRAAGLKVETDFRNEKINYKV 600

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           REHS+ K+P I++CG +EA E+S+ IRR GS     +SL +AI     E++PPD +
Sbjct: 601 REHSLAKVPAIVVCGMREAEEKSVNIRRLGSKHQTAMSLDEAIEAFRSEAVPPDLK 656


>gi|319898981|ref|YP_004159074.1| Threonyl-tRNA synthetase [Bartonella clarridgeiae 73]
 gi|319402945|emb|CBI76496.1| Threonyl-tRNA synthetase [Bartonella clarridgeiae 73]
          Length = 658

 Score =  728 bits (1880), Expect = 0.0,   Method: Composition-based stats.
 Identities = 398/654 (60%), Positives = 508/654 (77%), Gaps = 2/654 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M   I L+FPDGS +++P   TG ++A+SIS  LAKKAVA +++G + DLSDP+ + G +
Sbjct: 1   MSCSISLSFPDGSKRDYPTEITGLELAKSISNFLAKKAVAYSLDGVLRDLSDPLGQSGQV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT +DPR+L +IRH CAH++AEAVQ ++PE QV IGP+IE+GFYYDF ++QPF+ D+L
Sbjct: 61  EIITRDDPRALELIRHDCAHVLAEAVQELFPETQVTIGPVIENGFYYDFARKQPFTLDDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM+EII R+ PF K+  S EKA+++F  K E YK+E++++IP  +++ +Y QG+W
Sbjct: 121 TIIEKKMREIIQRNKPFRKEIWSREKAKKIFSEKNELYKIELIDAIPDDQDLKVYYQGDW 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPH++STGQ+   FKLMKVAGAYWRGD+N PML+RIYGTA+  + +L  YL+ LE
Sbjct: 181 FDLCRGPHMQSTGQIGNAFKLMKVAGAYWRGDANNPMLTRIYGTAFTNENDLKVYLHMLE 240

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQ 298
           E+EKRDHR+L REMDLFH  E+G G+IFWH KGWK+FQ LISYMRR++ D  Y E+  PQ
Sbjct: 241 ETEKRDHRRLGREMDLFHFQEEGPGMIFWHPKGWKMFQNLISYMRRRLDDHKYAEVQAPQ 300

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           VLD+ LW+ SGHW  Y+ NMF    A D   +   +ALKPMNCPGHV +F HGLKSYR+L
Sbjct: 301 VLDKSLWEVSGHWRWYKENMFKTIPAADDWNNEYIYALKPMNCPGHVQIFKHGLKSYRDL 360

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFG V+R EPSGSLHGLMR R FTQDDAH+FCT+EQ+ +ECL I++LI+S Y DF
Sbjct: 361 PIRLAEFGLVHRYEPSGSLHGLMRARSFTQDDAHIFCTEEQLADECLSINDLILSTYADF 420

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE+I +KLSTRPEKRVGSD LWD AENIM  VL TI+  S  R+   +L GEGAFYGPK
Sbjct: 421 GFEEISLKLSTRPEKRVGSDELWDHAENIMTSVLKTIEKKSSGRVRISILPGEGAFYGPK 480

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           FEY LKDAIGR+WQCGT QVDFNLP RF AFY++  SEK  PVMIHRA+FGS+ERF+GI+
Sbjct: 481 FEYTLKDAIGREWQCGTTQVDFNLPERFGAFYIDKDSEKRQPVMIHRAIFGSMERFLGIL 540

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IENF G++P WL+P Q  V TITS A +YA++I   LK+  LS+  D RNE INYKIREH
Sbjct: 541 IENFSGHMPFWLAPQQIAVATITSDANDYAKKITAKLKAIGLSVILDSRNEKINYKIREH 600

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           S++KIP+I++CG +EA   S+ +RR GS     +SL + I  L  E++PPD ++
Sbjct: 601 SLQKIPVILVCGKREAETNSVNMRRLGSVEQSLLSLEEVIKQLLDEAIPPDLRR 654


>gi|306843943|ref|ZP_07476538.1| threonyl-tRNA synthetase [Brucella sp. BO1]
 gi|306275698|gb|EFM57422.1| threonyl-tRNA synthetase [Brucella sp. BO1]
          Length = 658

 Score =  728 bits (1878), Expect = 0.0,   Method: Composition-based stats.
 Identities = 404/654 (61%), Positives = 519/654 (79%), Gaps = 3/654 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M + + L FPDGS++ +    TG+ +AESIS+SLAKKAVA A++G V DLSDP+   G +
Sbjct: 1   MSNTVSLQFPDGSVREYDASMTGAALAESISKSLAKKAVAYAVDGTVRDLSDPLGASGRV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT EDPR+L +IRH  AH++AEAVQ ++P  QV IGP+IE+GFYYDF + +PF+ D+L
Sbjct: 61  EIITREDPRALELIRHDTAHVLAEAVQELFPGTQVTIGPVIENGFYYDFARNEPFTLDDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM+EII R+ PF K+  S EKA+++F  K E+YKVE++++IPA +++ +Y QG+W
Sbjct: 121 PVIEKKMREIIQRNKPFTKEVWSREKAKQVFSDKGESYKVELVDAIPAGQDLKIYYQGDW 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPH+ STGQ+   FKLMKVAGAYWRGD+N PML+RIYGTA+    +L  YL+ LE
Sbjct: 181 FDLCRGPHMASTGQIGNSFKLMKVAGAYWRGDANNPMLTRIYGTAFANDNDLQAYLHMLE 240

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+EKRDHR+L REMDLFH  E+G GV+FWH KGWK+FQ L+SYMRR++    Y+E+N PQ
Sbjct: 241 EAEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDSHGYQEVNAPQ 300

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           VLD+ LW+ SGHW  YR NMF V  A D   D R FALKPMNCPGHV +F HGLKSYR+L
Sbjct: 301 VLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIFKHGLKSYRDL 360

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P++LAEFG+V+R EPSG+LHGLMRVRGFTQDDAH+FCT+EQM  ECL+I++LI+S+YKDF
Sbjct: 361 PIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQMAAECLRINDLILSVYKDF 420

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE+I +KLSTRPEKRVGSD LWD AE++M  VL+ I+  S + I TG+L GEGAFYGPK
Sbjct: 421 GFEEITIKLSTRPEKRVGSDELWDRAESVMMTVLEQIRQQS-NNIKTGILPGEGAFYGPK 479

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           FEY LKDAIGR+WQCGT QVDFNLP RF AFY+ + SEK  PVMIHRA+ GS+ERF+GI+
Sbjct: 480 FEYTLKDAIGREWQCGTTQVDFNLPERFGAFYIGADSEKKQPVMIHRAICGSMERFLGIL 539

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IENF G++PLW +P+Q +V TITS A EYA+E A  LK+  L + TD RNE INYK+REH
Sbjct: 540 IENFAGHMPLWFAPVQVVVATITSDADEYAKEAAAKLKAVGLQVVTDLRNEKINYKVREH 599

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           S++K+P+I++CG +EA E+++ +RR GS   + ++L +AI  L +E+ PPD  +
Sbjct: 600 SLQKVPVILVCGKREAEEKTVNMRRLGSRDQESMTLDEAIARLCEEATPPDLLR 653


>gi|254706742|ref|ZP_05168570.1| threonyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|261314206|ref|ZP_05953403.1| threonyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|261303232|gb|EEY06729.1| threonyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
          Length = 658

 Score =  728 bits (1878), Expect = 0.0,   Method: Composition-based stats.
 Identities = 403/654 (61%), Positives = 518/654 (79%), Gaps = 3/654 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M + + L FPDGS++ +    TG+ +AESIS+SLAKKAVA A++G V DLSDP+   G +
Sbjct: 1   MSNTVSLQFPDGSVREYDASMTGAALAESISKSLAKKAVAYAVDGTVRDLSDPLGASGKV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT EDPR+L +IRH  AH++AEAVQ ++P  QV IGP+IE+GFYYDF + +PF+ D+L
Sbjct: 61  EIITREDPRALELIRHDTAHVLAEAVQELFPGTQVTIGPVIENGFYYDFARNEPFTLDDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM+EII R+ PF K+  S EKA+++F  K E+YKVE++++IPA +++ +Y QG+W
Sbjct: 121 PVIEKKMREIIQRNKPFTKEVWSREKAKQVFSDKGESYKVELVDAIPAGQDLKIYYQGDW 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPH+ STGQ+   FKLMKVAGAYWRGD+N PML+RIYGTA+    +L  YL+ LE
Sbjct: 181 FDLCRGPHMASTGQIGNSFKLMKVAGAYWRGDANNPMLTRIYGTAFANDNDLQAYLHMLE 240

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+EKRDHR+L REMDLFH  E+G GV+FWH KGWK+FQ L+SYMRR++    Y+E+N PQ
Sbjct: 241 EAEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDSHGYQEVNAPQ 300

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           VLD+ LW+ SGHW  YR NMF V  A D   D   FALKPMNCPGHV +F HGLKSYR+L
Sbjct: 301 VLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDCVFALKPMNCPGHVQIFKHGLKSYRDL 360

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P++LAEFG+V+R EPSG+LHGLMRVRGFTQDDAH+FCT+EQM  ECL+I++LI+S+YKDF
Sbjct: 361 PIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQMAAECLRINDLILSVYKDF 420

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE+I +KLSTRPEKRVGSD LWD AE++M  VL+ I+  S + I TG+L GEGAFYGPK
Sbjct: 421 GFEEITIKLSTRPEKRVGSDELWDRAESVMMTVLEQIRQQS-NNIKTGILPGEGAFYGPK 479

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           FEY LKDAIGR+WQCGT QVDFNLP RF AFY+ + SEK  PVMIHRA+ GS+ERF+GI+
Sbjct: 480 FEYTLKDAIGREWQCGTTQVDFNLPERFGAFYIGADSEKKQPVMIHRAICGSMERFLGIL 539

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IENF G++PLW +P+Q +V TITS A EYA+E A  LK+  L + TD RNE INYK+REH
Sbjct: 540 IENFAGHMPLWFAPVQVVVATITSDADEYAKEAAAKLKAAGLQVVTDLRNEKINYKVREH 599

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           S++K+P+I++CG +EA E+++ +RR GS   + ++L +AI  L +E+ PPD  +
Sbjct: 600 SLQKVPVILVCGKREAEEKTVNMRRLGSRDQESMTLDEAIARLCEEATPPDLLR 653


>gi|237815491|ref|ZP_04594489.1| threonyl-tRNA synthetase [Brucella abortus str. 2308 A]
 gi|237790328|gb|EEP64538.1| threonyl-tRNA synthetase [Brucella abortus str. 2308 A]
          Length = 693

 Score =  728 bits (1878), Expect = 0.0,   Method: Composition-based stats.
 Identities = 405/654 (61%), Positives = 519/654 (79%), Gaps = 3/654 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M + + L FPDGS++ +    TG+ +AESIS+SLAKKAVA A++G V DLSDP+   G +
Sbjct: 36  MSNTVSLQFPDGSVREYDASMTGAALAESISKSLAKKAVAYAVDGTVRDLSDPLGASGKL 95

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT EDPR+L +IRH  AH++AEAVQ ++P  QV IGP+IE+GFYYDF + +PF+ D+L
Sbjct: 96  EIITREDPRALELIRHDTAHVLAEAVQELFPGTQVTIGPVIENGFYYDFARNEPFTLDDL 155

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM+EII R+ PF K+  S EKA+++F  K E+YKVE++++IPA +++ +Y QG+W
Sbjct: 156 PVIEKKMREIIQRNKPFTKEVWSREKAKQVFSDKGESYKVELVDAIPAGQDLKIYYQGDW 215

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPH+ STGQ+   FKLMKVAGAYWRGD+N PML+RIYGTA+    +L  YL+ LE
Sbjct: 216 FDLCRGPHMASTGQIGNSFKLMKVAGAYWRGDANNPMLTRIYGTAFANDNDLQAYLHMLE 275

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+EKRDHR+L REMDLFH  E+G GV+FWH KGWK+FQ L+SYMRR++    Y+E+NTPQ
Sbjct: 276 EAEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDSHGYQEVNTPQ 335

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           VLD+ LW+ SGHW  YR NMF V  A D   D R FALKPMNCPGHV +F HGLKSYR+L
Sbjct: 336 VLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIFKHGLKSYRDL 395

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P++LAEFG+V+R EPSG+LHGLMRVRGFTQDDAH+FCT+EQM  ECL I++LI+S+YKDF
Sbjct: 396 PIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQMAAECLHINDLILSVYKDF 455

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE+I +KLSTRPEKRVGSD LWD AE++M  VL+ I+  S + I TG+L GEGAFYGPK
Sbjct: 456 GFEEITIKLSTRPEKRVGSDELWDRAESVMMTVLEQIRQQS-NNIKTGILPGEGAFYGPK 514

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           FEY LKDAIGR+WQCGT QVDFNLP RF AFY+ + SEK  PVMIHRA+ GS+ERF+GI+
Sbjct: 515 FEYTLKDAIGREWQCGTTQVDFNLPERFGAFYIGADSEKKQPVMIHRAICGSMERFLGIL 574

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IENF G++PLW +P+Q +V TITS A EYA+E A  LK+  L + TD RNE INYK+REH
Sbjct: 575 IENFAGHMPLWFAPVQVVVATITSDADEYAKEAAAKLKAAGLQVVTDLRNEKINYKVREH 634

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           S++K+P+I++CG +EA E+++ +RR GS   + ++L +AI  L +E+ PPD  +
Sbjct: 635 SLQKVPVILVCGKREAEEKTVNMRRLGSRDQESMTLDEAIARLCEEATPPDLLR 688


>gi|114706249|ref|ZP_01439151.1| threonyl-tRNA synthetase [Fulvimarina pelagi HTCC2506]
 gi|114538110|gb|EAU41232.1| threonyl-tRNA synthetase [Fulvimarina pelagi HTCC2506]
          Length = 670

 Score =  728 bits (1878), Expect = 0.0,   Method: Composition-based stats.
 Identities = 406/659 (61%), Positives = 519/659 (78%), Gaps = 7/659 (1%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M   + LTFPDGSIKN+    +G+++A  IS+SL KKAVA A++G+V DL+DPV R G++
Sbjct: 1   MAEAVSLTFPDGSIKNYAPQTSGAEIASGISKSLGKKAVAYALDGEVRDLADPVGRAGAL 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EI+T +DPR+L +IRH CAH++AEAVQ +WP  QV IGP+IE+GFYYDF +E PF+ ++L
Sbjct: 61  EILTRDDPRALELIRHDCAHVLAEAVQELWPGTQVTIGPVIENGFYYDFHRETPFTPEDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM EII R+ PF K+  S  +ARE+FE+K E +KVE++++IP  +++ +Y+QGEW
Sbjct: 121 PVIEKKMSEIIQRNRPFTKEVWSRNEAREVFETKGENFKVELVDAIPEDQDLKIYKQGEW 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPH+ STGQ+   FKLMK AGAYWRGDS RPMLSRIYGTAW ++ +L  YL+ LE
Sbjct: 181 FDLCRGPHMASTGQIGDAFKLMKTAGAYWRGDSTRPMLSRIYGTAWASKDQLKNYLHMLE 240

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQV 299
           E+EKRDHRKL REMDLFH  E+G GV+FWH KGW++FQ+L+SYMRR++   YEE+N PQ+
Sbjct: 241 EAEKRDHRKLGREMDLFHFQEEGPGVVFWHSKGWRMFQSLVSYMRRRLDGTYEEVNAPQI 300

Query: 300 LDQHLWQQSGHWDSYRANMFAVKC------ADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           LD+ LW+ SGHW  Y+ NMFAVK        DD   D R FA+KPMNCPGHV +F HGLK
Sbjct: 301 LDKALWETSGHWGWYQENMFAVKSAHAFTRPDDAEADHRVFAIKPMNCPGHVQIFKHGLK 360

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYRELP+R AEFG+V+R EPSG+LHGLMRVRGFTQDDAHVFCT+EQ+  ECL+I++LI+S
Sbjct: 361 SYRELPIRYAEFGNVHRYEPSGALHGLMRVRGFTQDDAHVFCTEEQLAAECLRINDLILS 420

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           IY DFGFE+I+VKLSTRPEKRVGSD  WD AE IM  VL  I+  S  +I T +L GEGA
Sbjct: 421 IYADFGFEEIVVKLSTRPEKRVGSDENWDHAEAIMGDVLKEIEAKSGGKIRTSILEGEGA 480

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPKFEY L+DAIGR+WQCGT QVDFNLP RF AFY++ +SEK  PVMIHRA+ GS+ER
Sbjct: 481 FYGPKFEYTLRDAIGREWQCGTTQVDFNLPERFGAFYIDENSEKKRPVMIHRAICGSMER 540

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           F+GI++EN+ G++PLW  P QA+V TITS A +YA+E+  +L+   L +ETD RNE INY
Sbjct: 541 FLGILLENYAGHMPLWFVPQQAVVATITSEADDYAREVTEVLRDAGLKVETDLRNEKINY 600

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           K+REHS+ K+P+II+CG +EA ER++ IRR GS     + L +A+  L  E++PPD ++
Sbjct: 601 KVREHSLAKVPVIIVCGRREAEERAVNIRRLGSKDQTAMGLEEAVQTLAAEAMPPDVKR 659


>gi|163868456|ref|YP_001609665.1| threonyl-tRNA synthetase [Bartonella tribocorum CIP 105476]
 gi|189083598|sp|A9IVB0|SYT_BART1 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|161018112|emb|CAK01670.1| Threonyl-tRNA synthetase [Bartonella tribocorum CIP 105476]
          Length = 658

 Score =  727 bits (1877), Expect = 0.0,   Method: Composition-based stats.
 Identities = 409/654 (62%), Positives = 512/654 (78%), Gaps = 2/654 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M   I L+FPDGS +N+P   TG ++AESIS+SLAKKAVA +++G   DLSD + + G +
Sbjct: 1   MSCSISLSFPDGSKRNYPAEMTGLELAESISKSLAKKAVAYSLDGITRDLSDSLGQSGQV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT ED R+L +IRH CAH++AEAVQ ++PE QV IGP+IE+GFYYDF ++QPF+ D+L
Sbjct: 61  EIITREDSRALELIRHDCAHVLAEAVQELFPETQVTIGPVIENGFYYDFARQQPFTLDDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM+EII R+ PF K+  S EKAR +F  KKE YKVE++ SIP  +++ +Y QGEW
Sbjct: 121 TIIEKKMREIIQRNKPFRKEIWSREKARRVFSEKKEFYKVELINSIPDNQDLKIYYQGEW 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPH++STGQ+   FKLMKVAGAYWRGD+N PML+RIYGTA+  + +L  YL+ LE
Sbjct: 181 FDLCRGPHMQSTGQIGNAFKLMKVAGAYWRGDANNPMLTRIYGTAFANENDLKAYLHMLE 240

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQ 298
           E+EKRDHR+L REMDLFH  E+G G+IFWH+KGWK+FQ LI+YMRR++ D  Y E+N PQ
Sbjct: 241 EAEKRDHRRLGREMDLFHFQEEGPGMIFWHQKGWKMFQNLINYMRRRLDDHQYAEVNAPQ 300

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           VLD+ LW+ SGHW  Y+ NMF    A + +     +ALKPMNCPGHV +F HGLKSYR+L
Sbjct: 301 VLDRSLWEISGHWGWYKENMFKAIPAAEDLDHEHIYALKPMNCPGHVQIFKHGLKSYRDL 360

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFG V+R EPSGSLHGLMRVR FTQDDAH+FCT EQ+  ECL I++LI+S Y DF
Sbjct: 361 PIRLAEFGLVHRYEPSGSLHGLMRVRSFTQDDAHIFCTDEQLAAECLSINDLILSTYADF 420

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF++I +KLSTRPEKRVGSDALWD AE+IM+ VL TI+     +I T +L GEGAFYGPK
Sbjct: 421 GFKEISLKLSTRPEKRVGSDALWDHAESIMESVLKTIETKFAGQIKTSILPGEGAFYGPK 480

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           FEY LKDAIGR+WQCGT Q+DFNLP RF AFY++  SEK  PVMIHRA+FGS+ERF+GI+
Sbjct: 481 FEYTLKDAIGREWQCGTTQLDFNLPERFGAFYIDKDSEKRQPVMIHRAIFGSMERFLGIL 540

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IENF G++PLWL+P Q +V TITS A EYAQ+I   LK+  LS  TD RNE INYKIREH
Sbjct: 541 IENFAGHMPLWLAPEQIVVATITSEANEYAQKITARLKAVGLSATTDLRNEKINYKIREH 600

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           S++K+P+I++CG +EA   S+ +RR GS     +S+ DAI  L+ ES PPD Q+
Sbjct: 601 SLQKVPVILVCGKREAETNSVNMRRLGSPNQTLLSVEDAIKQLSNESTPPDLQR 654


>gi|225627544|ref|ZP_03785581.1| threonyl-tRNA synthetase [Brucella ceti str. Cudo]
 gi|225617549|gb|EEH14594.1| threonyl-tRNA synthetase [Brucella ceti str. Cudo]
          Length = 693

 Score =  727 bits (1877), Expect = 0.0,   Method: Composition-based stats.
 Identities = 404/654 (61%), Positives = 519/654 (79%), Gaps = 3/654 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M + + L FPDGS++ +    TG+ +AESIS+SLAKKAVA A++G V DLSDP+   G +
Sbjct: 36  MSNTVSLQFPDGSVREYDASMTGAALAESISKSLAKKAVAYAVDGTVRDLSDPLGASGKV 95

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT EDPR+L +IRH  AH++AEAVQ ++P  QV IGP+IE+GFYYDF + +PF+ D+L
Sbjct: 96  EIITREDPRALELIRHDTAHVLAEAVQELFPGTQVTIGPVIENGFYYDFARNEPFTLDDL 155

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM+EII R+ PF K+  S EKA+++F  K E+YKVE++++IPA +++ +Y QG+W
Sbjct: 156 PVIEKKMREIIQRNKPFTKEVWSREKAKQVFSDKGESYKVELVDAIPAGQDLKIYYQGDW 215

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPH+ STGQ+   FKLMKVAGAYWRGD+N PML+RIYGTA+    +L  YL+ LE
Sbjct: 216 FDLCRGPHMASTGQIGNSFKLMKVAGAYWRGDANNPMLTRIYGTAFANDNDLQAYLHMLE 275

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+EKRDHR+L REMDLFH  E+G GV+FWH KGWK+FQ L+SYMRR++    Y+E+N PQ
Sbjct: 276 EAEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDSHGYQEVNAPQ 335

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           VLD+ LW+ SGHW  YR NMF V  A D   D R FALKPMNCPGHV +F HGLKSYR+L
Sbjct: 336 VLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIFKHGLKSYRDL 395

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P++LAEFG+V+R EPSG+LHGLMRVRGFTQDDAH+FCT+EQM  ECL+I++LI+S+YKDF
Sbjct: 396 PIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQMAAECLRINDLILSVYKDF 455

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE+I +KLSTRPEKRVGSD LWD AE++M  VL+ I+  S + I TG+L GEGAFYGPK
Sbjct: 456 GFEEITIKLSTRPEKRVGSDELWDRAESVMMTVLEQIRQQS-NNIKTGILPGEGAFYGPK 514

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           FEY LKDAIGR+WQCGT QVDFNLP RF AFY+ + SEK  PVMIHRA+ GS+ERF+GI+
Sbjct: 515 FEYTLKDAIGREWQCGTTQVDFNLPERFGAFYIGADSEKKQPVMIHRAICGSMERFLGIL 574

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IENF G++PLW +P+Q +V TITS A EYA+E A  LK+  L + TD RNE INYK+REH
Sbjct: 575 IENFAGHMPLWFAPVQVVVATITSDADEYAKEAAAKLKAAGLQVVTDLRNEKINYKVREH 634

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           S++K+P+I++CG +EA E+++ +RR GS   + ++L +AI  L +E+ PPD  +
Sbjct: 635 SLQKVPVILVCGKREAEEKTVNMRRLGSRDQESMTLDEAIARLCEEATPPDLLR 688


>gi|153009484|ref|YP_001370699.1| threonyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188]
 gi|151561372|gb|ABS14870.1| threonyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188]
          Length = 661

 Score =  727 bits (1877), Expect = 0.0,   Method: Composition-based stats.
 Identities = 404/654 (61%), Positives = 516/654 (78%), Gaps = 3/654 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M + + + FPDGS++ +    TG+ +AESIS+SLAKKAVA A++G V DLSDP+   G I
Sbjct: 4   MSNTVSMQFPDGSVREYDASMTGAGLAESISKSLAKKAVAYAVDGTVRDLSDPLGASGKI 63

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EI+T EDPR+L +IRH  AH++AEAVQ ++P  QV IGP+IE+GFYYDF + +PF+ D+L
Sbjct: 64  EILTREDPRALELIRHDTAHVLAEAVQELFPGTQVTIGPVIENGFYYDFARNEPFTPDDL 123

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM+EII R+ PF K+  S EKA+++F  K E YKVE++E+IPA +++ +Y QG+W
Sbjct: 124 PVIEKKMREIIQRNKPFTKEVWSREKAKQVFADKGENYKVELVEAIPAGQDLKIYYQGDW 183

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPH+ STGQ+   FKLMKVAGAYWRGDSN PML+RIYGTA+    +L  YL+ LE
Sbjct: 184 FDLCRGPHMASTGQIGNSFKLMKVAGAYWRGDSNNPMLTRIYGTAFANDNDLQAYLHMLE 243

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+EKRDHR+L REMDLFH  E+G GV+FWH KGWK+FQ L+SYMRR++    Y+E+N PQ
Sbjct: 244 EAEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDSHGYQEVNAPQ 303

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           VLD+ LW+ SGHW  YR NMF V  A D   D R FALKPMNCPGHV +F HGLKSYR+L
Sbjct: 304 VLDKSLWETSGHWGWYRDNMFKVTVAGDETDDDRVFALKPMNCPGHVMIFKHGLKSYRDL 363

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P++LAEFG+V+R EPSG+LHGLMRVRGFTQDDAH+FCT+EQM  ECL+I++LI+S+YKDF
Sbjct: 364 PIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQMAAECLRINDLILSVYKDF 423

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE+I +KLSTRPEKRVGSD LWD AE++M  VL+ I+  S + I TG+L GEGAFYGPK
Sbjct: 424 GFEEITIKLSTRPEKRVGSDELWDRAESVMMSVLEKIQQQS-NNIKTGILPGEGAFYGPK 482

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           FEY LKDAIGR+WQCGT QVDFNLP RF AFY++  SEK  PVMIHRA+ GS+ERF+GI+
Sbjct: 483 FEYTLKDAIGREWQCGTTQVDFNLPERFGAFYIDKDSEKRQPVMIHRAICGSMERFLGIL 542

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IENF G++PLW +P+Q +V TITS A EYA + A  LK+  L + TD RNE INYK+REH
Sbjct: 543 IENFAGHMPLWFAPVQVVVATITSDADEYAAQAAAKLKAAGLQVSTDLRNEKINYKVREH 602

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           S++K+P+I++CG +EA E ++ +RR GS   + ++L +AI  L +E+ PPD  +
Sbjct: 603 SLQKVPVILVCGKREAEENTVNMRRLGSRDQESMTLDEAIARLVEEATPPDLLR 656


>gi|319404307|emb|CBI77900.1| Threonyl-tRNA synthetase [Bartonella rochalimae ATCC BAA-1498]
          Length = 654

 Score =  727 bits (1877), Expect = 0.0,   Method: Composition-based stats.
 Identities = 397/653 (60%), Positives = 504/653 (77%), Gaps = 2/653 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSI 59
           M   I L+FPDGS +++    TG ++AESIS+SLAKKAVA ++NG + DLSDP+ + G +
Sbjct: 1   MSRSISLSFPDGSKRDYQTETTGLELAESISKSLAKKAVAYSLNGVIRDLSDPLEQSGQV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT +DPR+L +IRH CAH++AEAVQ ++PE QV IGP+IE+GFYYDF ++QPF+ D+L
Sbjct: 61  EIITRDDPRALELIRHDCAHVLAEAVQELFPETQVTIGPVIENGFYYDFARKQPFTLDDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM+EII R+ PF K+  S EKA+++F  K E YKVE++++IP  +++ +Y QG+W
Sbjct: 121 TTIEKKMREIIQRNKPFRKEIWSREKAKKIFSEKNELYKVELIDAIPDDQDLKVYYQGDW 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPH++STGQ+   FKLMKVAGAYWRGD+N PML+RIYGTA+  + +L  YL+ LE
Sbjct: 181 FDLCRGPHMQSTGQIGNAFKLMKVAGAYWRGDANNPMLTRIYGTAFTNENDLKAYLHMLE 240

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQ 298
           E+EKRDHR+L REMDLFH  E+  G+IFWH KGWK+FQ LISYMRR++ +  Y E+  PQ
Sbjct: 241 EAEKRDHRRLGREMDLFHFQEESPGMIFWHPKGWKMFQNLISYMRRRLDNHKYAEVQAPQ 300

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           VLD+ LW+ SGHW  Y+ NMF    A D   D  T+ALKPMNCPGHV +F HGLKSYR+L
Sbjct: 301 VLDKSLWEISGHWGWYKENMFKTIPAADDWNDEYTYALKPMNCPGHVQIFKHGLKSYRDL 360

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           PVRLAEFG V+R EPSGSLHGLMRVR FTQDDAH+FCT+EQ+ +ECL I++LI+S Y DF
Sbjct: 361 PVRLAEFGLVHRYEPSGSLHGLMRVRSFTQDDAHIFCTEEQLADECLSINDLILSTYADF 420

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF++I +KLSTRPEKRVGSD LWD AENIM  VL TI+  S   +   +L GEGAFYGPK
Sbjct: 421 GFKEISLKLSTRPEKRVGSDELWDHAENIMTSVLKTIEEKSSGCVKISILPGEGAFYGPK 480

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           FEY L DAIGR+WQCGT QVDFNLP RF AFY++  SEK  PVMIHRA+FGS+ERF+GI+
Sbjct: 481 FEYTLTDAIGREWQCGTTQVDFNLPERFGAFYIDKDSEKRQPVMIHRAIFGSMERFLGIL 540

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IENF G++P WL+P Q +V TITS A EYA++I   LK+  LS + D RNE INYKIREH
Sbjct: 541 IENFAGHIPFWLAPQQIVVATITSDANEYAKKITEKLKALGLSAKLDSRNEKINYKIREH 600

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           S++K+P+I++CG +EA   S+ +RR GS     + +      L  E+ PPD +
Sbjct: 601 SLQKVPVILVCGKQEAQTNSVNMRRLGSIEQTFLPIEKVFAQLLDEATPPDLR 653


>gi|254719143|ref|ZP_05180954.1| threonyl-tRNA synthetase [Brucella sp. 83/13]
 gi|265984137|ref|ZP_06096872.1| threonyl-tRNA synthetase [Brucella sp. 83/13]
 gi|306838428|ref|ZP_07471273.1| threonyl-tRNA synthetase [Brucella sp. NF 2653]
 gi|264662729|gb|EEZ32990.1| threonyl-tRNA synthetase [Brucella sp. 83/13]
 gi|306406568|gb|EFM62802.1| threonyl-tRNA synthetase [Brucella sp. NF 2653]
          Length = 658

 Score =  727 bits (1876), Expect = 0.0,   Method: Composition-based stats.
 Identities = 403/654 (61%), Positives = 518/654 (79%), Gaps = 3/654 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M + + L FPDGS++ +    TG+ +AESIS+SLAKKAVA A++G V DLSDP+   G +
Sbjct: 1   MSNTVSLQFPDGSVREYDASMTGAALAESISKSLAKKAVAYAVDGTVRDLSDPLGASGKV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT EDPR+L +IRH  AH++AEAVQ ++P  QV IGP+IE+GFYYDF + +PF+ D+L
Sbjct: 61  EIITREDPRALELIRHDTAHVLAEAVQELFPGTQVTIGPVIENGFYYDFARNEPFTLDDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM+EII R+ PF K+  S EKA+++F  K E+YKVE++++IPA +++ +Y QG+W
Sbjct: 121 PVIEKKMREIIQRNKPFTKEVWSREKAKQVFSDKGESYKVELVDAIPAGQDLKIYYQGDW 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPH+ STGQ+   FKLMKVAGAYWRGD+N PML+RIYGTA+    +L  YL+ LE
Sbjct: 181 FDLCRGPHMASTGQIGNSFKLMKVAGAYWRGDANNPMLTRIYGTAFANDNDLQAYLHMLE 240

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+EKRDHR+L REMDLFH  E+G GV+FWH KGWK+FQ L+SYMRR++    Y+E+N PQ
Sbjct: 241 EAEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDSHGYQEVNAPQ 300

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           VLD+ LW+ SGHW  YR NMF V  A D   D R FALKPMNCPGHV +F HGLKSYR+L
Sbjct: 301 VLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIFKHGLKSYRDL 360

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P++LAEFG+V+R EPSG+LHGLMRVRGFTQDDAH+FCT+EQM  ECL+I++LI+S+YKDF
Sbjct: 361 PIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQMAAECLRINDLILSVYKDF 420

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE+I +KLSTRPEKRVGSD LWD AE++M  VL+ I+  S + I TG+L GEGAFYGPK
Sbjct: 421 GFEEITIKLSTRPEKRVGSDELWDRAESVMMTVLEQIRQQS-NNIKTGILPGEGAFYGPK 479

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           FEY LKDAIGR+WQCGT QVDFNLP RF AFY+ + SEK  PVMIHRA+ GS+ERF+GI+
Sbjct: 480 FEYTLKDAIGREWQCGTTQVDFNLPERFGAFYIGADSEKKQPVMIHRAICGSMERFLGIL 539

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IENF G++PLW +P+Q +V TITS A EYA+E A  LK+  L + TD RNE INYK+REH
Sbjct: 540 IENFAGHMPLWFAPVQVVVATITSDADEYAKEAAAKLKAAGLQVVTDLRNEKINYKVREH 599

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           S++K+P+I++CG +EA E+++ +RR GS   + ++L +AI  L +E+  PD  +
Sbjct: 600 SLQKVPVILVCGKREAEEKTVNMRRLGSRDQESMTLDEAIARLCEEATAPDLLR 653


>gi|294852343|ref|ZP_06793016.1| threonyl-tRNA synthetase [Brucella sp. NVSL 07-0026]
 gi|294820932|gb|EFG37931.1| threonyl-tRNA synthetase [Brucella sp. NVSL 07-0026]
          Length = 683

 Score =  726 bits (1875), Expect = 0.0,   Method: Composition-based stats.
 Identities = 404/654 (61%), Positives = 520/654 (79%), Gaps = 3/654 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M + + L FPDGS++ +    TG+ +AESIS+SLAKKAVA A++G V DLSDP+   G +
Sbjct: 26  MSNTVSLQFPDGSVREYDASMTGAALAESISKSLAKKAVAYAVDGTVRDLSDPLGASGKV 85

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT EDPR+L +IRH  AH++AEAVQ ++P  QV IGP+IE+GFYYDF + +PF+ D+L
Sbjct: 86  EIITREDPRALELIRHDTAHVLAEAVQELFPGTQVTIGPVIENGFYYDFARNEPFTLDDL 145

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM+EII R+ PF K+  S EKA+++F  K E+YKVE++++IPA +++ +Y QG+W
Sbjct: 146 PVIEKKMREIIQRNKPFTKEVWSREKAKQVFSDKGESYKVELVDAIPAGQDLKIYYQGDW 205

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPH+ STGQ+   FKLMKVAGAYWRGD+N PML+RIYGTA+    +L  YL+ LE
Sbjct: 206 FDLCRGPHMASTGQIGNSFKLMKVAGAYWRGDANNPMLTRIYGTAFANDNDLQAYLHMLE 265

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+EKRDHR+L REMDLFH  E+G+GV+FWH KGWK+FQ L+SYMRR++    Y+E+N PQ
Sbjct: 266 EAEKRDHRRLGREMDLFHFQEEGAGVVFWHAKGWKMFQNLVSYMRRRLDSHGYQEVNAPQ 325

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           VLD+ LW+ SGHW  YR NMF V  A D   D R FALKPMNCPGHV +F HGLKSYR+L
Sbjct: 326 VLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIFKHGLKSYRDL 385

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P++LAEFG+V+R EPSG+LHGLMRVRGFTQDDAH+FCT+EQM  ECL+I++LI+S+YKDF
Sbjct: 386 PIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQMAAECLRINDLILSVYKDF 445

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE+I +KLSTRPEKRVGSD LWD AE++M  VL+ I+  S + I TG+L GEGAFYGPK
Sbjct: 446 GFEEITIKLSTRPEKRVGSDELWDRAESVMMTVLEQIRQQS-NNIKTGILPGEGAFYGPK 504

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           FEY LKDAIGR+WQCGT QVDFNLP RF AFY+ + SEK  PVMIHRA+ GS+ERF+GI+
Sbjct: 505 FEYTLKDAIGREWQCGTTQVDFNLPERFGAFYIGADSEKKQPVMIHRAICGSMERFLGIL 564

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IENF G++PLW +P+Q +V TITS A EYA+E A  LK+  L + TD RNE INYK+REH
Sbjct: 565 IENFAGHMPLWFAPVQVVVATITSDADEYAKEAAAKLKAAGLQVVTDLRNEKINYKVREH 624

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           S++K+P+I++CG +EA E+++ +RR GS   + ++L +AI  L +E+ PPD  +
Sbjct: 625 SLQKVPVILVCGKREAEEKTVNMRRLGSRDQESMTLDEAIARLCEEATPPDLLR 678


>gi|239831910|ref|ZP_04680239.1| threonyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301]
 gi|239824177|gb|EEQ95745.1| threonyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301]
          Length = 674

 Score =  726 bits (1875), Expect = 0.0,   Method: Composition-based stats.
 Identities = 403/654 (61%), Positives = 516/654 (78%), Gaps = 3/654 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M + + + FPDGS++ +    TG+ +AESIS+SLAKKAVA A++G V DLSDP+   G +
Sbjct: 17  MSNTVSMQFPDGSVREYDASMTGAGLAESISKSLAKKAVAYAVDGTVRDLSDPLGASGKV 76

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EI+T EDPR+L +IRH  AH++AEAVQ ++P  QV IGP+IE+GFYYDF + +PF+ D+L
Sbjct: 77  EILTREDPRALELIRHDTAHVLAEAVQELFPGTQVTIGPVIENGFYYDFARNEPFTPDDL 136

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM+EII R+ PF K+  S EKA+++F  K E YKVE++++IPA +++ +Y QG+W
Sbjct: 137 PVIEKKMREIIQRNKPFTKEIWSREKAKQVFADKGENYKVELVDAIPAGQDLKIYYQGDW 196

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPH+ STGQ+   FKLMKVAGAYWRGD+N PML+RIYGTA+    +L  YL+ LE
Sbjct: 197 FDLCRGPHMASTGQIGNSFKLMKVAGAYWRGDANNPMLTRIYGTAFANDNDLQAYLHMLE 256

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+EKRDHR+L REMDLFH  E+G GV+FWH KGWK+FQ L+SYMRR++    Y+E+N PQ
Sbjct: 257 EAEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDSHGYQEVNAPQ 316

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           VLD+ LW+ SGHW  YR NMF V  A D   D R FALKPMNCPGHV +F HGLKSYR+L
Sbjct: 317 VLDKSLWETSGHWGWYRDNMFKVTVAGDETDDDRVFALKPMNCPGHVQIFKHGLKSYRDL 376

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P++LAEFG+V+R EPSG+LHGLMRVRGFTQDDAH+FCT+EQM  ECL+I++LI+S+YKDF
Sbjct: 377 PIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQMAAECLRINDLILSVYKDF 436

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE+I +KLSTRPEKRVGSD LWD AE++M  VLD I+  S + I TGVL GEGAFYGPK
Sbjct: 437 GFEEITIKLSTRPEKRVGSDELWDRAESVMMSVLDQIQQQS-NNIKTGVLPGEGAFYGPK 495

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           FEY LKDAIGR+WQCGT QVDFNLP RF AFY++  SEK  PVMIHRA+ GS+ERF+GI+
Sbjct: 496 FEYTLKDAIGREWQCGTTQVDFNLPERFGAFYIDKDSEKRQPVMIHRAICGSMERFLGIL 555

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IENF G++PLW +P+Q +V TITS A EYA + A  LK+  L + TD RNE INYK+REH
Sbjct: 556 IENFAGHMPLWFAPVQVVVATITSDADEYAAQAAAKLKAAGLQVATDLRNEKINYKVREH 615

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           S++K+P+I++CG +EA E ++ +RR GS   + ++L +AI  L +E+ PPD  +
Sbjct: 616 SLQKVPVILVCGKREAEENTVNMRRLGSRDQESMTLDEAIARLVEEATPPDLLR 669


>gi|49474171|ref|YP_032213.1| threonyl-tRNA synthetase [Bartonella quintana str. Toulouse]
 gi|73919771|sp|Q6FZZ7|SYT_BARQU RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|49239675|emb|CAF26046.1| Threonyl-tRNA synthetase [Bartonella quintana str. Toulouse]
          Length = 658

 Score =  726 bits (1873), Expect = 0.0,   Method: Composition-based stats.
 Identities = 402/654 (61%), Positives = 513/654 (78%), Gaps = 2/654 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M   + L+FPDGS +++P   TG ++A SIS+SLAKKAVA ++NG   DLSDP+ + G I
Sbjct: 1   MSCSVSLSFPDGSKRDYPNEMTGLELAASISKSLAKKAVAYSLNGITRDLSDPLGQSGQI 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT EDPR+L +IRH CAH++AEAVQ ++PE QV IGP+IE+GFYYDF ++QPF+ ++L
Sbjct: 61  EIITREDPRALELIRHDCAHVLAEAVQELFPETQVTIGPVIENGFYYDFARQQPFTLNDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM EII R+ PF K+  S +KARE+F  K E YKVE+++SIP  +++ +Y QG+W
Sbjct: 121 TIIEKKMHEIIQRNKPFRKEIWSRKKAREIFSEKNELYKVELIDSIPDNQDLKIYYQGDW 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPH++STGQ+   FKLMKVAGAYWRGD++ PML+RIYGTA+  + +L  YL+ LE
Sbjct: 181 FDLCRGPHMQSTGQIGNAFKLMKVAGAYWRGDAHNPMLTRIYGTAFANENDLKAYLHMLE 240

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQ 298
           E+EKRDHR+L REMDLFH  EDG G+IFWH+KGWK+FQ LISYMRR++ D  Y E+N PQ
Sbjct: 241 EAEKRDHRRLGREMDLFHFQEDGPGMIFWHQKGWKMFQNLISYMRRRLDDHQYSEVNAPQ 300

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           VLD+ LW+ SGHW  Y+ NMF    A +   D   +ALKPMNCPGHV +F H LKSYR+L
Sbjct: 301 VLDKSLWELSGHWGWYKENMFKAIPAIEDWDDKCIYALKPMNCPGHVQIFKHSLKSYRDL 360

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           PVRLAEFG V+R EPSG+LHGLMRVR FTQDDAH+FCT EQ+ +ECL I++LI+S Y DF
Sbjct: 361 PVRLAEFGVVHRYEPSGALHGLMRVRSFTQDDAHIFCTDEQLADECLNINDLILSTYADF 420

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF++I +KLSTRPEKRVGSD+LWD AENIM+ VL TI+     +I T +L GEGAFYGPK
Sbjct: 421 GFKEISLKLSTRPEKRVGSDSLWDHAENIMESVLKTIETKFAGQIKTSILPGEGAFYGPK 480

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           FEY LKDAIGR+WQCGT QVDFNLP RF+AFY++  SEK  PVMIHRA+FGS+ERF+GI+
Sbjct: 481 FEYTLKDAIGREWQCGTTQVDFNLPERFDAFYIDKDSEKRQPVMIHRAIFGSMERFLGIL 540

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IENF G++PLWL+P Q +V  ITS A EYA++I   LK+  LS ++D RNE INYKIREH
Sbjct: 541 IENFAGHMPLWLAPEQVVVAAITSEANEYAKKITARLKAVGLSAKSDLRNEKINYKIREH 600

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           S++K+P+I++CG +EA   S+ +RR GST    +S+ + I  L  E++ PD ++
Sbjct: 601 SLQKVPVILVCGKREAETNSVSMRRLGSTDQVFLSIEETIEQLKNEAMSPDLRR 654


>gi|148560208|ref|YP_001259002.1| threonyl-tRNA synthetase [Brucella ovis ATCC 25840]
 gi|148371465|gb|ABQ61444.1| threonyl-tRNA synthetase [Brucella ovis ATCC 25840]
          Length = 693

 Score =  726 bits (1873), Expect = 0.0,   Method: Composition-based stats.
 Identities = 404/654 (61%), Positives = 518/654 (79%), Gaps = 3/654 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M + + L FPDGS++ +    TG+ +AESIS+SLAKKAVA A++G V DLSDP+   G +
Sbjct: 36  MSNTVSLQFPDGSVREYDASMTGAALAESISKSLAKKAVAYAVDGTVRDLSDPLGASGKV 95

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT EDPR+L +IRH  AH++AEAVQ ++P  QV IGP+IE+GFYYDF + +PF+ D+L
Sbjct: 96  EIITREDPRALELIRHDTAHVLAEAVQELFPGTQVTIGPVIENGFYYDFARNEPFTLDDL 155

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM EII R+ PF K+  S EKA+++F  K E+YKVE++++IPA +++ +Y QG+W
Sbjct: 156 PVIEKKMCEIIQRNKPFTKEVWSREKAKQVFSDKGESYKVELVDAIPAGQDLKIYYQGDW 215

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPH+ STGQ+   FKLMKVAGAYWRGD+N PML+RIYGTA+    +L  YL+ LE
Sbjct: 216 FDLCRGPHMASTGQIGNSFKLMKVAGAYWRGDANNPMLTRIYGTAFANDNDLQAYLHMLE 275

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+EKRDHR+L REMDLFH  E+G GV+FWH KGWK+FQ L+SYMRR++    Y+E+N PQ
Sbjct: 276 EAEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDSHGYQEVNAPQ 335

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           VLD+ LW+ SGHW  YR NMF V  A D   D R FALKPMNCPGHV +F HGLKSYR+L
Sbjct: 336 VLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIFKHGLKSYRDL 395

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P++LAEFG+V+R EPSG+LHGLMRVRGFTQDDAH+FCT+EQM  ECL+I++LI+S+YKDF
Sbjct: 396 PIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQMAAECLRINDLILSVYKDF 455

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE+I +KLSTRPEKRVGSD LWD AE++M  VL+ I+  S + I TG+L GEGAFYGPK
Sbjct: 456 GFEEITIKLSTRPEKRVGSDELWDRAESVMMTVLEQIRQQS-NNIKTGILPGEGAFYGPK 514

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           FEY LKDAIGR+WQCGT QVDFNLP RF AFY+ + SEK  PVMIHRA+ GS+ERF+GI+
Sbjct: 515 FEYTLKDAIGREWQCGTTQVDFNLPERFGAFYIGADSEKKQPVMIHRAICGSMERFLGIL 574

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IENF G++PLW +P+Q +V TITS A EYA+E A  LK+  L + TD RNE INYK+REH
Sbjct: 575 IENFAGHMPLWFAPVQVVVATITSDADEYAKEAAAKLKAAGLQVVTDLRNEKINYKVREH 634

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           S++K+P+I++CG +EA E+++ +RR GS   + ++L +AI  L +E+ PPD  +
Sbjct: 635 SLQKVPVILVCGKREAEEKTVNMRRLGSRDQESMTLDEAIARLCEEATPPDLLR 688


>gi|298291991|ref|YP_003693930.1| threonyl-tRNA synthetase [Starkeya novella DSM 506]
 gi|296928502|gb|ADH89311.1| threonyl-tRNA synthetase [Starkeya novella DSM 506]
          Length = 666

 Score =  725 bits (1870), Expect = 0.0,   Method: Composition-based stats.
 Identities = 385/652 (59%), Positives = 504/652 (77%), Gaps = 1/652 (0%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIE 60
           P+ + LTFPDG+++ +    TG++VA SI++SLAKK++A+ ++G + DLSDP+ ++   E
Sbjct: 14  PATVNLTFPDGAVRAYASGTTGAEVAASIAKSLAKKSLAMKLDGTLSDLSDPITQDAKFE 73

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           +IT E P +L +IRH  AH++AEAVQ +WP  QV IGP+IE+GFYYDF + +PFS ++  
Sbjct: 74  LITRESPEALELIRHDAAHVLAEAVQELWPGTQVTIGPVIENGFYYDFFRNEPFSLEDFP 133

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEKKM+EI+ARD+ F K+    E+ + +F  K EA+KVE++++IPA + + +Y+QG WF
Sbjct: 134 AIEKKMREIVARDASFTKEVWDREETKRVFAEKGEAFKVELVDAIPADQQIKIYKQGNWF 193

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ S G+V   FKLMKVAGAYWRGD+  PML+RIYGTAW  ++EL  Y+  LEE
Sbjct: 194 DLCRGPHMPSVGKVGDAFKLMKVAGAYWRGDAKNPMLTRIYGTAWRDREELDAYILQLEE 253

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVL 300
           +EKRDHR+L REMDLFH  E+G GV+FWH KGW +FQ L++YMRR++  DY E+N PQVL
Sbjct: 254 AEKRDHRRLGREMDLFHFQEEGPGVVFWHPKGWNLFQNLVAYMRRRLAADYSEVNAPQVL 313

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D+ LW+ SGHW  Y+ NMF V+ A D   + R +ALKPMNCPGHV +F HGLKSYR+LP+
Sbjct: 314 DKSLWETSGHWGWYKDNMFKVQPAGDAEDNDRVYALKPMNCPGHVQIFKHGLKSYRDLPM 373

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLAEFG+V+R EPSG+LHGLMRVRGFTQDDAH+FCT+EQM  ECLKI+ LI+S Y DFGF
Sbjct: 374 RLAEFGAVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQMAAECLKINELILSTYADFGF 433

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           E+I+VKLSTRPEKRVGSD +WD AE++M+ VL  I+  S  +I TG+L GEGAFYGPKFE
Sbjct: 434 EEIVVKLSTRPEKRVGSDEVWDHAEDVMERVLTQIEAESGGKIKTGILPGEGAFYGPKFE 493

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           Y L+DAIGR+WQCGT QVDFNLP RF AFYV++  +K  PVMIHRA+ GS+ERF GI+IE
Sbjct: 494 YTLRDAIGREWQCGTTQVDFNLPERFGAFYVDADGQKKTPVMIHRAICGSMERFTGILIE 553

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +  G+ PLWL+P+QA+V TITS    YA+EIA   +   L +E D RNE INYK+REHS+
Sbjct: 554 HHAGHFPLWLAPVQAVVATITSDGDPYAEEIAAAARKMGLRVELDLRNEKINYKVREHSV 613

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
            K+P +I+ G KEA+ER++ IRR GS     ++L +A+  L  E+ PPD Q+
Sbjct: 614 AKVPALIVVGRKEAAERTVSIRRLGSQNQTTLTLDEALAALVAEASPPDLQR 665


>gi|75676225|ref|YP_318646.1| threonyl-tRNA synthetase [Nitrobacter winogradskyi Nb-255]
 gi|74421095|gb|ABA05294.1| Ser-tRNA(Thr) hydrolase [Nitrobacter winogradskyi Nb-255]
          Length = 686

 Score =  725 bits (1870), Expect = 0.0,   Method: Composition-based stats.
 Identities = 391/652 (59%), Positives = 505/652 (77%), Gaps = 3/652 (0%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
            ++ LTFPDG+ + FP + TG ++A+ IS SLAK+ VA+A++G V DL+DP+  + +IE 
Sbjct: 24  DNVVLTFPDGATREFPKNTTGLEIAKGISPSLAKRTVAMALDGIVNDLADPIEQDATIEF 83

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           I+ +DPR+L +IRH  AH++AEAVQ++WP  QV IGP+IE+GFYYDF + +PFS ++ A 
Sbjct: 84  ISRDDPRALELIRHDAAHVLAEAVQTLWPGTQVTIGPVIENGFYYDFFRNEPFSVEDFAA 143

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEKKM+EIIARD PF K     EK +++F  K EA+KVE++++IP  E + +Y QG+WFD
Sbjct: 144 IEKKMREIIARDQPFTKDVWDREKTKQVFRDKGEAFKVELVDAIPGNEPIRIYYQGDWFD 203

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ STG++   FKLMKVAGAYWRGDSN PML+RIYGTA+  Q +L  YL  +EE+
Sbjct: 204 LCRGPHMTSTGKIGNAFKLMKVAGAYWRGDSNNPMLTRIYGTAFANQADLDAYLKQIEEA 263

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLD 301
           EKRDHRKL RE+DLFH  E+G GV+FWH KGW IFQ +I+YMRR++ +DY+E+N PQ+LD
Sbjct: 264 EKRDHRKLGRELDLFHFQEEGPGVVFWHAKGWTIFQAVIAYMRRRLAEDYDEVNAPQMLD 323

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW+ YR NMFA + A D  +D R F +KPMNCPGHV +F HGLKSYR+LP+R
Sbjct: 324 KSLWETSGHWEWYRENMFAAQSAGDEAEDKRWFTIKPMNCPGHVQLFKHGLKSYRDLPLR 383

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFG V+R EPSG++HGLMRVRGFTQDDAHVFCT+EQ+ +ECLKI+ LI+S Y DFGF+
Sbjct: 384 LAEFGVVHRYEPSGAMHGLMRVRGFTQDDAHVFCTEEQLADECLKINELILSTYADFGFD 443

Query: 422 -KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
            ++ VKLSTRPEKRVGSDA WD AE +M  VL  I  +S +RI T    GEGAFYGPKFE
Sbjct: 444 GELTVKLSTRPEKRVGSDAAWDHAEAVMADVLKHI-AASNNRIRTETNPGEGAFYGPKFE 502

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           Y+L+DAIGRDWQCGT QVDFNLP RF AFY+++   K  PVM+HRA+ GSIERFIGI+IE
Sbjct: 503 YVLRDAIGRDWQCGTTQVDFNLPERFGAFYIDADGGKKAPVMVHRAICGSIERFIGILIE 562

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +F G+ PLWL+P+QA+VTTITS   EYA+ +A+  +   L +E D RNE INYK+REHS+
Sbjct: 563 HFAGHFPLWLAPVQAVVTTITSDGDEYAKVVASAARRAGLRVELDLRNEKINYKVREHSL 622

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
            KIP +++ G KEA  +S+ IRR GS   +     +AI  L  E++PPD Q+
Sbjct: 623 AKIPALLVVGKKEAETQSVSIRRLGSDGQKVTPTGEAIAALVAEAVPPDIQR 674


>gi|188581528|ref|YP_001924973.1| threonyl-tRNA synthetase [Methylobacterium populi BJ001]
 gi|179345026|gb|ACB80438.1| threonyl-tRNA synthetase [Methylobacterium populi BJ001]
          Length = 675

 Score =  724 bits (1869), Expect = 0.0,   Method: Composition-based stats.
 Identities = 386/647 (59%), Positives = 506/647 (78%), Gaps = 1/647 (0%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           LTFPDG+ + F    TG  V E I++SLAK+ VA+A++G V DL D +  + +IE I+ +
Sbjct: 4   LTFPDGNTRAFEAAVTGRTVVEGIAKSLAKRTVAMALDGTVRDLDDTIERDAAIEFISRD 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           DPR+L +IRH CAH++AEAVQ++WP  QV IGP+IE+GFYYDF K++PF+ ++  +IE K
Sbjct: 64  DPRALELIRHDCAHVLAEAVQALWPGTQVTIGPVIENGFYYDFAKDEPFTPEDFPKIEAK 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+EII+RD+PF K+  + +  + LF  K E YKVE++++IPA E++ +YRQGEWFDLCRG
Sbjct: 124 MREIISRDAPFTKEVWTRDDVKALFAEKGERYKVELVDAIPAGEDLKIYRQGEWFDLCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PH+ STG+V   FKLMKVAGAYWRGD+N PML+RIYGTAW +Q +L  YL+ LEE+E+RD
Sbjct: 184 PHMTSTGKVGTAFKLMKVAGAYWRGDANNPMLTRIYGTAWASQADLDAYLHRLEEAERRD 243

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHLW 305
           HR+L +EMDLFH  E+G GV+FWH KGW IFQ LI+YMRR++K DY E+N PQ+LD+ LW
Sbjct: 244 HRRLGKEMDLFHFQEEGPGVVFWHAKGWTIFQELIAYMRRRLKGDYAEVNAPQILDKSLW 303

Query: 306 QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEF 365
           + SGHW  YR NMFA + A +  +D R FALKPMNCPGHV +F HGLKSYR+LP+R+AEF
Sbjct: 304 ETSGHWGWYRENMFAAQSAGEEAEDKRWFALKPMNCPGHVQIFKHGLKSYRDLPLRMAEF 363

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
           G V+R EPSG++HGLMRVRGFTQDDAH+FCT++Q+  ECLKI++LI+S Y DFGF++I+V
Sbjct: 364 GVVHRYEPSGAMHGLMRVRGFTQDDAHIFCTEDQLAAECLKINDLILSTYADFGFDQILV 423

Query: 426 KLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKD 485
           KLSTRPEKRVGSDALWD AE +M  VL  I+  S  RI T V  GEGAFYGPKFEY+L+D
Sbjct: 424 KLSTRPEKRVGSDALWDHAEAVMTRVLAQIEEQSGGRIKTAVNPGEGAFYGPKFEYVLRD 483

Query: 486 AIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           AIGRDWQCGT QVDFNLP RF+A Y+++ S+K  PVMIHRA+ GS+ERF GI+IE+F G+
Sbjct: 484 AIGRDWQCGTTQVDFNLPERFDASYIDADSQKKPPVMIHRAICGSMERFTGILIEHFAGH 543

Query: 546 LPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPI 605
            PLWL+P+Q +V TITS A  YA+E+  +L+   L +E D RNE INYK+REHS+ K+P+
Sbjct: 544 FPLWLAPVQVVVATITSDADPYAREVVRVLERAGLRVEADLRNEKINYKVREHSLAKVPV 603

Query: 606 IIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           ++  G +EA ER++ +RR GS  T  ++L  A+    +E+  PD ++
Sbjct: 604 LLALGRREAEERTVSVRRLGSQKTTTLTLDAAVAAFIEEATSPDRRR 650


>gi|254503680|ref|ZP_05115831.1| threonyl-tRNA synthetase [Labrenzia alexandrii DFL-11]
 gi|222439751|gb|EEE46430.1| threonyl-tRNA synthetase [Labrenzia alexandrii DFL-11]
          Length = 703

 Score =  724 bits (1868), Expect = 0.0,   Method: Composition-based stats.
 Identities = 402/657 (61%), Positives = 515/657 (78%), Gaps = 8/657 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
             I+LTFPD S++ +    +G DVA  IS+SLAKKAVA+ ++G++ DLSDP+  + +IEI
Sbjct: 47  DMIELTFPDNSVRAYEAGTSGLDVATGISKSLAKKAVAMTLDGELKDLSDPIDTDANIEI 106

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-------EQPF 114
           +T +DPR+L +IRH  AH+MAEAVQ IWP  QV IGP+IE+GFYYDF +         PF
Sbjct: 107 VTRDDPRALELIRHDAAHVMAEAVQEIWPGTQVTIGPVIENGFYYDFKRVHPDTKDNWPF 166

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
           + D+L  IEKKM+EIIAR + F K+  + ++A+  F +K E YKVE++++IP  +++ +Y
Sbjct: 167 TQDDLPVIEKKMREIIARGAQFTKEVWTRDEAKTYFAAKGEDYKVELIDAIPEDQDLKIY 226

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
           +QG+W DLCRGPH+ ST Q+   FKLMKVAGAYWRGDSN  ML+RIY TAW+ ++EL  Y
Sbjct: 227 KQGQWLDLCRGPHMVSTKQIGDAFKLMKVAGAYWRGDSNNEMLTRIYATAWHNEKELKGY 286

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEI 294
           L+ LEE+EKRDHRKL REM+LFH  E+G GV+FWH KGW IFQ LI+Y RR++KDDY+E+
Sbjct: 287 LHMLEEAEKRDHRKLGREMNLFHFQEEGPGVVFWHPKGWDIFQNLIAYKRRRLKDDYKEV 346

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
           N PQVL   LW+ SGHW  Y+ NMF+V+CAD   +D R FALKPMNCPGHV +F HGLKS
Sbjct: 347 NAPQVLHTSLWETSGHWAWYKDNMFSVQCADPESEDDRIFALKPMNCPGHVEIFKHGLKS 406

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YR+LP+R+AEFG V+R EPSG++HGLMRVRGFTQDDAHVFCT+EQM  ECLKI++LI+S+
Sbjct: 407 YRDLPLRMAEFGVVHRYEPSGAMHGLMRVRGFTQDDAHVFCTEEQMAEECLKINDLILSV 466

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           Y+DFGFE+I+VKLSTRPEKRVGSD +WD AE +M  VL TI+  S+ RI T +L GEGAF
Sbjct: 467 YEDFGFEEIVVKLSTRPEKRVGSDEVWDHAEAVMTSVLKTIEEQSEGRIKTDILPGEGAF 526

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPKFEY LKDAIGRDWQCGT QVDFNLP RF AFYV+++ EK  PVMIHRA+ GS+ERF
Sbjct: 527 YGPKFEYTLKDAIGRDWQCGTTQVDFNLPERFGAFYVDNNGEKKVPVMIHRAICGSMERF 586

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
           +GI+IEN+ G+ PLW +P+Q +V TITS A  Y QE+A+LLKS  L +ETDFRNE INYK
Sbjct: 587 LGILIENYAGHFPLWFAPLQIVVATITSEADSYGQEVADLLKSKGLKVETDFRNEKINYK 646

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           +REHS+ K+P+I++CG +EA ER++ IRR GS     + L +A+    +E+ PPD +
Sbjct: 647 VREHSLAKVPVILVCGMREAEERTVNIRRLGSKNQTPMGLDEAVAAFVEEATPPDLK 703


>gi|328543265|ref|YP_004303374.1| Threonyl-tRNA synthetase [polymorphum gilvum SL003B-26A1]
 gi|326413011|gb|ADZ70074.1| Threonyl-tRNA synthetase [Polymorphum gilvum SL003B-26A1]
          Length = 654

 Score =  723 bits (1866), Expect = 0.0,   Method: Composition-based stats.
 Identities = 394/650 (60%), Positives = 510/650 (78%), Gaps = 1/650 (0%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I LTFPD S++ +    TG+++AE IS+SLAKKAVA+A++G++ DL+DP+ R+  IEI+
Sbjct: 1   MIHLTFPDNSVREYAPGITGAEIAEGISKSLAKKAVAMALDGELKDLADPIARDARIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +DPR+L +IRH  AH+MAEAVQ +WP  QV IGP+IE+GFYYDF +++PF+ ++L  I
Sbjct: 61  TRDDPRALELIRHDAAHVMAEAVQELWPGTQVTIGPVIENGFYYDFKRDEPFTPEDLPVI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EKKM+EIIAR + F K+  S E+A+  F +K E YKVE++++IP  + + +Y+QG W DL
Sbjct: 121 EKKMREIIARGAAFTKEVWSREEAKRHFLTKGETYKVELVDAIPEDQELKIYKQGTWLDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ ST Q+   FKLMKVAGAYWRGDSN  ML+RIYGTAW  + EL  YL+ LEE+E
Sbjct: 181 CRGPHMTSTRQIGDAFKLMKVAGAYWRGDSNNEMLTRIYGTAWANEAELKAYLHMLEEAE 240

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQ 302
           KRDHRKL REMDLFH  E+G GV+FWH KGW +FQ+L++YMRR++  DY+E+N PQ+LD 
Sbjct: 241 KRDHRKLGREMDLFHFQEEGPGVVFWHAKGWSLFQSLVAYMRRRLAADYDEVNAPQILDT 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW  Y+ NMFAV+CAD   +D R FALKPMNCPGHV +F HGLKSYR+LP+R+
Sbjct: 301 SLWETSGHWGWYKENMFAVQCADTEAEDTRLFALKPMNCPGHVQIFKHGLKSYRDLPLRM 360

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFG V+R EPSG++HGLMRVRGFTQDDAH+FCT+EQ+  ECLKI++LI+S+Y+DFGFE+
Sbjct: 361 AEFGVVHRYEPSGAMHGLMRVRGFTQDDAHIFCTEEQLAAECLKINDLILSVYQDFGFEE 420

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+VKLSTRPEKRVGSDALWD AE +M  VL  I++ S  RI TG+L GEGAFYGPKFEY 
Sbjct: 421 IVVKLSTRPEKRVGSDALWDHAEEVMTRVLKQIEDQSGGRIKTGILPGEGAFYGPKFEYT 480

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+DAIGR+WQCGT QVDFNLP RF AFYV+   EK  PVM+HRA+ GS+ERF+GI+IENF
Sbjct: 481 LRDAIGREWQCGTTQVDFNLPERFGAFYVDKDGEKKTPVMVHRAICGSMERFLGILIENF 540

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G+ PLWL+P Q +V TITS A +YA+E+   L    L  + D RNE INYK+REHS+ K
Sbjct: 541 AGHFPLWLAPRQVVVATITSEADDYAKEVHAALTKAGLRADLDLRNEKINYKVREHSLAK 600

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
            P+I++CG +EA ER++ +RR G      + L +AI    +E++PPD ++
Sbjct: 601 TPVILVCGKREAEERTVNVRRLGKADQVAMGLEEAIAAFAEEAVPPDVKR 650


>gi|254470004|ref|ZP_05083408.1| threonyl-tRNA synthetase [Pseudovibrio sp. JE062]
 gi|211960315|gb|EEA95511.1| threonyl-tRNA synthetase [Pseudovibrio sp. JE062]
          Length = 648

 Score =  723 bits (1865), Expect = 0.0,   Method: Composition-based stats.
 Identities = 395/650 (60%), Positives = 510/650 (78%), Gaps = 6/650 (0%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            ++LTFPD S++ +   +TG+DVA SIS+SL KKAVAVAI+G++ DLSDP+    +IEI+
Sbjct: 1   MLQLTFPDNSVREYDAGSTGADVAGSISKSLLKKAVAVAIDGELRDLSDPIETNAAIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +DPR+L +IRH  AH+MAEAVQ +WPE QV IGP+IE+GFYYDF ++ PF++++L +I
Sbjct: 61  TRDDPRALELIRHDAAHVMAEAVQELWPETQVTIGPVIENGFYYDFKRDTPFTTEDLPKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EKKMQ+II R++ F K+  S  +A++ F +K E YKVE++++IP  E V +Y+QGEW DL
Sbjct: 121 EKKMQQIIQRNAKFTKEIWSRNEAKDYFAAKGEDYKVELVDAIPEDETVKIYKQGEWLDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ STGQ+ + FKLMKVAGAYWRGD+N  ML+RIYGTAW++ ++L  YL+ LEE+E
Sbjct: 181 CRGPHMASTGQIGQAFKLMKVAGAYWRGDANNEMLTRIYGTAWSSDKDLKAYLHMLEEAE 240

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQ 302
           KRDHRKL REMDL+H  E+G GV+FWH KGW++FQ L +YMRR+++DDY+E+N PQ+LD+
Sbjct: 241 KRDHRKLGREMDLYHFQEEGPGVVFWHHKGWQLFQNLTNYMRRRLEDDYQEVNAPQILDK 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW+ YR NMFA +  D      R FA+KPMNCPGHV +F HGLKSYR+LP+R+
Sbjct: 301 ALWETSGHWEWYRENMFATETEDH-----RVFAIKPMNCPGHVQIFKHGLKSYRDLPLRM 355

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFG+V R EPSG+LHGLMRVR FTQDDAHVFCT+EQM  EC KI++LI+S+YKDFGFE+
Sbjct: 356 AEFGAVSRYEPSGALHGLMRVRAFTQDDAHVFCTEEQMAAECHKINDLIMSVYKDFGFEE 415

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+VKLSTRPEKRVGSD +WD AE +M  VL  I+ +S  +I TG+L GEGAFYGPKFEY 
Sbjct: 416 IVVKLSTRPEKRVGSDEVWDHAEAVMGEVLKEIEANSGGKIKTGILEGEGAFYGPKFEYT 475

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+DAIGR+WQCGT QVDFNLP RF AFYV+S  EK  PVMIHRA+ GS+ERF+GI+IENF
Sbjct: 476 LRDAIGREWQCGTTQVDFNLPERFGAFYVDSDGEKKQPVMIHRAICGSLERFLGILIENF 535

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G+ PLWL+P   +V  ITS A +YA+E+   LK   L  E D RNE INYK+REHS  K
Sbjct: 536 AGHFPLWLAPQHFVVAAITSDADDYAKEVHAALKKAGLRGELDLRNEKINYKVREHSHAK 595

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           IP+II  G +EA E+++ IRR GS     ++L +A+  L  E+  PD ++
Sbjct: 596 IPVIIAVGKREAEEKTVSIRRLGSRNQTAMTLDEAVASLRDEATAPDLKE 645


>gi|163851744|ref|YP_001639787.1| threonyl-tRNA synthetase [Methylobacterium extorquens PA1]
 gi|163663349|gb|ABY30716.1| threonyl-tRNA synthetase [Methylobacterium extorquens PA1]
          Length = 675

 Score =  721 bits (1862), Expect = 0.0,   Method: Composition-based stats.
 Identities = 386/647 (59%), Positives = 507/647 (78%), Gaps = 1/647 (0%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           LTFPDG+ + +    TG  V E I++SLAK+ VA+A++G VCDL D + R+ +IE I+ +
Sbjct: 4   LTFPDGNTRAYDAAVTGRTVVEGIAKSLAKRTVAMALDGTVCDLDDTIARDAAIEFISRD 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           DPR+L +IRH CAH++AEAVQ++WP  QV IGP+IE+GFYYDF K++PF+ ++  +IE K
Sbjct: 64  DPRALELIRHDCAHVLAEAVQALWPGTQVTIGPVIENGFYYDFAKDEPFTPEDFPKIEAK 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+EII+RD+PF K+    +  + LF  + E+YKVE++++IP  E++ +YRQGEWFDLCRG
Sbjct: 124 MREIISRDAPFTKEVWKRDDVKALFAERGESYKVELVDAIPPGEDLKIYRQGEWFDLCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PH+ STG+V   FKLMKVAGAYWRGDSN PML+RIYGTAW +Q +L  YL+ LEE+E+RD
Sbjct: 184 PHMTSTGKVGAAFKLMKVAGAYWRGDSNNPMLTRIYGTAWASQADLDAYLHRLEEAERRD 243

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHLW 305
           HR+L +EMDLFH  E+G GV+FWH KGW IFQ LI+YMRR++K DY E+N PQ+LD+ LW
Sbjct: 244 HRRLGKEMDLFHFQEEGPGVVFWHAKGWTIFQELIAYMRRRLKGDYAEVNAPQILDKSLW 303

Query: 306 QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEF 365
           + SGHW  YR NMFA + A +  +D R FALKPMNCPGHV +F HGLKSYR+LP+R+AEF
Sbjct: 304 ETSGHWGWYRENMFAAQSAGEEAEDKRWFALKPMNCPGHVQIFKHGLKSYRDLPLRMAEF 363

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
           G V+R EPSG++HGLMRVRGFTQDDAH+FCT++Q+  ECLKI++LI+S Y DFGF++I+V
Sbjct: 364 GVVHRYEPSGAMHGLMRVRGFTQDDAHIFCTEDQLAAECLKINDLILSTYADFGFDQILV 423

Query: 426 KLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKD 485
           KLSTRPEKRVGSDALWD AE +M  VL  I+  S  RI T V  GEGAFYGPKFEY+L+D
Sbjct: 424 KLSTRPEKRVGSDALWDHAEAVMTQVLAQIEEQSGGRIKTAVNPGEGAFYGPKFEYVLRD 483

Query: 486 AIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           AIGRDWQCGT QVDFNLP RF+A Y+++ S+K  PVMIHRA+ GS+ERF GI+IE+F G+
Sbjct: 484 AIGRDWQCGTTQVDFNLPERFDASYIDADSQKKPPVMIHRAICGSMERFTGILIEHFAGH 543

Query: 546 LPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPI 605
            PLWL+P+Q +V TITS A  YA+E+  +L+   L +E D RNE INYK+REHS+ K+P+
Sbjct: 544 FPLWLAPVQVVVATITSDADPYAREVVRVLERAGLRVEADLRNEKINYKVREHSLAKVPV 603

Query: 606 IIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           ++  G +EA ER++ +RR GS  T  ++L  A+    +E+  PD ++
Sbjct: 604 LLALGRREAEERTVSVRRMGSQKTTTMALDAALAAFIEEATSPDRRR 650


>gi|254561516|ref|YP_003068611.1| threonine tRNA synthetase [Methylobacterium extorquens DM4]
 gi|254268794|emb|CAX24755.1| threonine tRNA synthetase [Methylobacterium extorquens DM4]
          Length = 675

 Score =  721 bits (1862), Expect = 0.0,   Method: Composition-based stats.
 Identities = 387/647 (59%), Positives = 507/647 (78%), Gaps = 1/647 (0%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           LTFPDG+ + +    TG  V E I++SLAK+ VA+A++G VCDL D + R+ +IE I+ +
Sbjct: 4   LTFPDGNTRAYDAAVTGRTVVEGIAKSLAKRTVAMALDGTVCDLDDTIARDAAIEFISRD 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           DPR+L +IRH CAH++AEAVQ++WP  QV IGP+IE+GFYYDF K++PF+ ++  +IE K
Sbjct: 64  DPRALELIRHDCAHVLAEAVQALWPGTQVTIGPVIENGFYYDFAKDEPFTPEDFPKIEAK 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+EII+RD+PF K+    +  + LF  K E+YKVE++++IP  E++ +YRQGEWFDLCRG
Sbjct: 124 MREIISRDAPFTKEVWKRDDVKALFAEKGESYKVELVDAIPPGEDLKIYRQGEWFDLCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PH+ STG+V   FKLMKVAGAYWRGDSN PML+RIYGTAW +Q +L  YL+ LEE+E+RD
Sbjct: 184 PHMTSTGKVGAAFKLMKVAGAYWRGDSNNPMLTRIYGTAWASQADLDAYLHRLEEAERRD 243

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHLW 305
           HR+L +EMDLFH  E+G GV+FWH KGW IFQ LI+YMRR++K DY E+N PQ+LD+ LW
Sbjct: 244 HRRLGKEMDLFHFQEEGPGVVFWHAKGWTIFQELIAYMRRRLKGDYAEVNAPQILDKSLW 303

Query: 306 QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEF 365
           + SGHW  YR NMFA + A +  +D R FALKPMNCPGHV +F HGLKSYR+LP+R+AEF
Sbjct: 304 ETSGHWGWYRENMFAAQSAGEEAEDKRWFALKPMNCPGHVQIFKHGLKSYRDLPLRMAEF 363

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
           G V+R EPSG++HGLMRVRGFTQDDAH+FCT++Q+  ECLKI++LI+S Y DFGF++I+V
Sbjct: 364 GVVHRYEPSGAMHGLMRVRGFTQDDAHIFCTEDQLAAECLKINDLILSTYADFGFDQILV 423

Query: 426 KLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKD 485
           KLSTRPEKRVGSDALWD AE +M  VL  I+  S  RI T V  GEGAFYGPKFEY+L+D
Sbjct: 424 KLSTRPEKRVGSDALWDHAEAVMTQVLAQIEEQSGGRIKTAVNPGEGAFYGPKFEYVLRD 483

Query: 486 AIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           AIGRDWQCGT QVDFNLP RF+A Y+++ S+K  PVMIHRA+ GS+ERF GI+IE+F G+
Sbjct: 484 AIGRDWQCGTTQVDFNLPERFDASYIDADSQKKPPVMIHRAICGSMERFTGILIEHFAGH 543

Query: 546 LPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPI 605
            PLWL+P+Q +V TITS A  YA+E+  +L+   L +E D RNE INYK+REHS+ K+P+
Sbjct: 544 FPLWLAPVQVVVATITSDADPYAREVVRVLERAGLRVEADLRNEKINYKVREHSLAKVPV 603

Query: 606 IIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           ++  G +EA ER++ +RR GS  T  ++L  A+    +E+  PD ++
Sbjct: 604 LLALGRREAEERTVSVRRMGSQKTTTMALDAALAAFIEEATSPDRRR 650


>gi|218530550|ref|YP_002421366.1| threonyl-tRNA synthetase [Methylobacterium chloromethanicum CM4]
 gi|218522853|gb|ACK83438.1| threonyl-tRNA synthetase [Methylobacterium chloromethanicum CM4]
          Length = 675

 Score =  721 bits (1862), Expect = 0.0,   Method: Composition-based stats.
 Identities = 386/647 (59%), Positives = 506/647 (78%), Gaps = 1/647 (0%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           LTFPDG+ + +    TG  V E I++SLAK+ VA+A++G VCDL D + R+ +IE I+ +
Sbjct: 4   LTFPDGNTRAYDAAVTGRTVVEGIAKSLAKRTVAMALDGTVCDLDDTIARDAAIEFISRD 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           DPR+L +IRH CAH++AEAVQ++WP  QV IGP+IE+GFYYDF K++PF+ ++  +IE K
Sbjct: 64  DPRALELIRHDCAHVLAEAVQALWPGTQVTIGPVIENGFYYDFAKDEPFTPEDFPKIEAK 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+EII+RD+PF K+    +  + LF  K E+YKVE++++IP  E++ +YRQGEWFDLCRG
Sbjct: 124 MREIISRDAPFTKEVWKRDDVKALFAEKGESYKVELVDAIPPGEDLKIYRQGEWFDLCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PH+ STG+V   FKLMKVAGAYWRGDSN PML+RIYGTAW +Q +L  YL+ LEE+E+RD
Sbjct: 184 PHMTSTGKVGAAFKLMKVAGAYWRGDSNNPMLTRIYGTAWASQADLDAYLHRLEEAERRD 243

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHLW 305
           HR+L +EMDLFH  E+G GV+FWH KGW IFQ LI+YMRR++K DY E+N PQ+LD+ LW
Sbjct: 244 HRRLGKEMDLFHFQEEGPGVVFWHAKGWTIFQELIAYMRRRLKGDYAEVNAPQILDKSLW 303

Query: 306 QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEF 365
           + SGHW  YR NMFA + A +  +D R FALKPMNCPGHV +F HGLKSYR+LP+R+AEF
Sbjct: 304 ETSGHWGWYRENMFAAQSAGEEAEDKRWFALKPMNCPGHVQIFKHGLKSYRDLPLRMAEF 363

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
           G V+R EPSG++HGLMRVRGFTQDDAH+FCT++Q+  ECLKI++LI+S Y DFGF++I+V
Sbjct: 364 GVVHRYEPSGAMHGLMRVRGFTQDDAHIFCTEDQLAAECLKINDLILSTYADFGFDQILV 423

Query: 426 KLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKD 485
           KLS RPEKRVGSDALWD AE +M  VL  I+  S  RI T V  GEGAFYGPKFEY+L+D
Sbjct: 424 KLSMRPEKRVGSDALWDHAEAVMTQVLAQIEEQSGGRIKTAVNPGEGAFYGPKFEYVLRD 483

Query: 486 AIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           AIGRDWQCGT QVDFNLP RF+A Y+++ S+K  PVMIHRA+ GS+ERF GI+IE+F G+
Sbjct: 484 AIGRDWQCGTTQVDFNLPERFDASYIDADSQKKPPVMIHRAICGSMERFTGILIEHFAGH 543

Query: 546 LPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPI 605
            PLWL+P+Q +V TITS A  YA+E+  +L+   L +E D RNE INYK+REHS+ K+P+
Sbjct: 544 FPLWLAPVQVVVATITSDADPYAREVVRVLERAGLRVEADLRNEKINYKVREHSLAKVPV 603

Query: 606 IIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           ++  G +EA ER++ +RR GS  T  ++L  A+    +E+  PD ++
Sbjct: 604 LLALGRREAEERTVSVRRMGSQKTTTMALDAALAAFIEEATSPDRRR 650


>gi|240138908|ref|YP_002963383.1| threonine tRNA synthetase [Methylobacterium extorquens AM1]
 gi|240008880|gb|ACS40106.1| threonine tRNA synthetase [Methylobacterium extorquens AM1]
          Length = 675

 Score =  720 bits (1857), Expect = 0.0,   Method: Composition-based stats.
 Identities = 386/647 (59%), Positives = 505/647 (78%), Gaps = 1/647 (0%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           LTFPDG+ + +    TG  V E I++SLAK+ VA+A++G VCDL D + R+ +IE I  +
Sbjct: 4   LTFPDGNTRAYDAAVTGRTVVEGIAKSLAKRTVAMALDGTVCDLDDTIARDAAIEFIFRD 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D R+L +IRH CAH++AEAVQ++WP  QV IGP+IE+GFYYDF K++PF+ ++  +IE K
Sbjct: 64  DARALELIRHDCAHVLAEAVQALWPGTQVTIGPVIENGFYYDFAKDEPFTPEDFPKIEAK 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+EII+RD+PF K+    +  + LF  K E+YKVE++++IP  E++ +YRQGEWFDLCRG
Sbjct: 124 MREIISRDAPFTKEVWKRDDVKALFAEKGESYKVELVDAIPPGEDLKIYRQGEWFDLCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PH+ STG+V   FKLMKVAGAYWRGDSN PML+RIYGTAW +Q +L  YL+ LEE+E+RD
Sbjct: 184 PHMTSTGKVGAAFKLMKVAGAYWRGDSNNPMLTRIYGTAWASQADLDAYLHRLEEAERRD 243

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHLW 305
           HR+L +EMDLFH  E+G GV+FWH KGW IFQ LI+YMRR++K DY E+N PQ+LD+ LW
Sbjct: 244 HRRLGKEMDLFHFQEEGPGVVFWHAKGWTIFQELIAYMRRRLKGDYAEVNAPQILDKSLW 303

Query: 306 QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEF 365
           + SGHW  YR NMFA + A +  +D R FALKPMNCPGHV +F HGLKSYR+LP+R+AEF
Sbjct: 304 ETSGHWGWYRENMFAAQSAGEEAEDKRWFALKPMNCPGHVQIFKHGLKSYRDLPLRMAEF 363

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
           G V+R EPSG++HGLMRVRGFTQDDAH+FCT++Q+  ECLKI++LI+S Y DFGF++I+V
Sbjct: 364 GVVHRYEPSGAMHGLMRVRGFTQDDAHIFCTEDQLAAECLKINDLILSTYADFGFDQILV 423

Query: 426 KLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKD 485
           KLSTRPEKRVGSDALWD AE +M  VL  I+  S  RI T V  GEGAFYGPKFEY+L+D
Sbjct: 424 KLSTRPEKRVGSDALWDHAEAVMTQVLAQIEEQSGGRIKTAVNPGEGAFYGPKFEYVLRD 483

Query: 486 AIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           AIGRDWQCGT QVDFNLP RF+A Y+++ S+K  PVMIHRA+ GS+ERF GI+IE+F G+
Sbjct: 484 AIGRDWQCGTTQVDFNLPERFDASYIDADSQKKPPVMIHRAICGSMERFTGILIEHFAGH 543

Query: 546 LPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPI 605
            PLWL+P+Q +V TITS A  YA+E+  +L+   L +E D RNE INYK+REHS+ K+P+
Sbjct: 544 FPLWLAPVQVVVATITSDADPYAREVVRVLERAGLRVEADLRNEKINYKVREHSLAKVPV 603

Query: 606 IIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           ++  G +EA ER++ +RR GS  T  ++L  A+    +E+  PD ++
Sbjct: 604 LLALGRREAEERTVSVRRMGSQKTTTMTLDAALAAFIEEATSPDRRR 650


>gi|319405749|emb|CBI79372.1| Threonyl-tRNA synthetase [Bartonella sp. AR 15-3]
          Length = 654

 Score =  719 bits (1856), Expect = 0.0,   Method: Composition-based stats.
 Identities = 392/653 (60%), Positives = 500/653 (76%), Gaps = 2/653 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSI 59
           M   I L+FPDGS +N+P   TG ++A SIS+SLAKKAVA +++G + DLSDP+ + G +
Sbjct: 1   MSCSIFLSFPDGSKRNYPSETTGLELAASISKSLAKKAVAYSLDGALKDLSDPLEQSGQV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT +DPR+L +IRH CAH++AEAVQ ++PE QV IGP+IE+GFYYDF ++QPF+ D+L
Sbjct: 61  EIITRDDPRALELIRHDCAHVLAEAVQELFPETQVTIGPVIENGFYYDFARKQPFTLDDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM EII R+ PF K+ LS EKA+++F  K E YK+E+++SIP  +++ +Y QG+W
Sbjct: 121 TTIEKKMHEIIQRNKPFRKEILSREKAKKIFSEKNEFYKIELIDSIPDDQDLKIYYQGDW 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPH++STGQ+   FKLMKVAGAYWRGDSN  ML+RIYGTA+  + +L  YL+ LE
Sbjct: 181 FDLCRGPHMQSTGQIGNAFKLMKVAGAYWRGDSNNLMLTRIYGTAFTNENDLKAYLHMLE 240

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQ 298
           E+EKRDHR+L REMDLFH  E+  G+IFWH KGWK+FQ LISYMRR++ +  Y E+  PQ
Sbjct: 241 EAEKRDHRRLGREMDLFHFQEESPGMIFWHPKGWKMFQNLISYMRRRLDNHKYAEVQAPQ 300

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           VLD+ LW+ SGHW+ Y+ NMF    A D   +   +ALKPMNCPGHV +F HGLKSYR+L
Sbjct: 301 VLDKSLWEISGHWEWYKENMFKTIPAADDWNNEHIYALKPMNCPGHVQIFKHGLKSYRDL 360

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFG V+R EPSGSLHGLMRVR FTQDDAH+FCT+EQ+ +ECL I++LI+S Y DF
Sbjct: 361 PIRLAEFGLVHRYEPSGSLHGLMRVRSFTQDDAHIFCTEEQLADECLSINDLILSTYADF 420

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF++I +KLSTRPEKRVGSD LWD AE+IM  VL TI+     R+   +L GEGAFYGPK
Sbjct: 421 GFKEISIKLSTRPEKRVGSDELWDHAESIMTFVLKTIEKKFSGRVKISILPGEGAFYGPK 480

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           FEY L DAIGR+WQCGT QVDFNLP RF AFY++  SEK  PVMIHRA+FGS+ERF+GI+
Sbjct: 481 FEYTLTDAIGREWQCGTTQVDFNLPERFGAFYIDKDSEKRQPVMIHRAIFGSMERFLGIL 540

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IENF G++P WL+P Q +V TITS + EYA++I   LK+  L    D RNE INYKIREH
Sbjct: 541 IENFSGHIPFWLAPQQIVVATITSDSNEYAKKITEKLKAIGLLATLDSRNEKINYKIREH 600

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
            ++KIP+I++CG +EA   S+ +RR GS     + +      L  E+ PPD +
Sbjct: 601 FLQKIPVILVCGKREAETNSVNMRRLGSVKQTFLPIEKVFQQLLDEATPPDLR 653


>gi|299135303|ref|ZP_07028494.1| threonyl-tRNA synthetase [Afipia sp. 1NLS2]
 gi|298590280|gb|EFI50484.1| threonyl-tRNA synthetase [Afipia sp. 1NLS2]
          Length = 681

 Score =  719 bits (1855), Expect = 0.0,   Method: Composition-based stats.
 Identities = 380/653 (58%), Positives = 506/653 (77%), Gaps = 2/653 (0%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIE 60
           P  I +TFPDG+ + FP   TG ++A+ IS SLAK+ VA+A++G V DL+D +  +  IE
Sbjct: 24  PDMIAVTFPDGAKREFPKGTTGFEIAKGISPSLAKRTVAMALDGVVSDLTDGIEHDTKIE 83

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            I  +DPR+L +IRH  AH++AEAVQ++WP  QV IGP+I++GFYYDF + +PF+ ++ A
Sbjct: 84  FINRDDPRALELIRHDAAHVLAEAVQTLWPGTQVTIGPVIDNGFYYDFFRNEPFTPEDFA 143

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEKKM+EIIARD PF K+  + E+ +++F    E +KVE+L++IPA + + +Y+QG+WF
Sbjct: 144 AIEKKMREIIARDKPFTKEVWTREQTKQVFSDNGEMFKVELLDAIPADQQIKIYKQGDWF 203

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ S G+V   FKLMKVAGAYWRGDSN PML+RIYGTA+ +QQ+L  YL  LEE
Sbjct: 204 DLCRGPHMTSVGKVGNAFKLMKVAGAYWRGDSNNPMLTRIYGTAFASQQDLDAYLKQLEE 263

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVL 300
           +EKRDHR+L REMDLFH  E+G GV+FWH KGW +FQ +I+YMRR++  DY+E+N PQ+L
Sbjct: 264 AEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWTLFQAIIAYMRRRLAADYDEVNAPQML 323

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D+ LW+ SGHW+ YR NMFA + A D  +D R FA+KPMNCPGHV +F HGLKSYRELP+
Sbjct: 324 DKSLWETSGHWEWYRENMFAAQSAGDEAEDKRWFAIKPMNCPGHVLIFKHGLKSYRELPI 383

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLAEFG V+R EPSG++HGLMRVRGFTQDDAH+FCT++Q+ +ECLKI++LI+S Y +FGF
Sbjct: 384 RLAEFGVVHRYEPSGAMHGLMRVRGFTQDDAHIFCTEDQLADECLKINDLILSTYANFGF 443

Query: 421 E-KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           E ++ VKLSTRP+KRVG+DA WD AE++M  VL  I+  S +RI T +  GEGAFYGPKF
Sbjct: 444 EGELTVKLSTRPDKRVGTDAAWDHAESVMTKVLAQIEAKSGNRIKTSINPGEGAFYGPKF 503

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           EY+L+DAIGR+WQCGT QVDFNLP RF AFY++ HS K  PVM+HRA+ GS+ERF GI+I
Sbjct: 504 EYVLRDAIGREWQCGTTQVDFNLPERFGAFYIDEHSNKVAPVMVHRAICGSLERFTGILI 563

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E+F G+ PLWL+P+QA++TTITS   +YA+E+    ++  L +E D RNE INYK+REHS
Sbjct: 564 EHFAGHFPLWLAPVQAVITTITSDGDDYAREVFEACRAAGLRVEIDLRNEKINYKVREHS 623

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           + K+P +++ G KEA  R++ IRR G      + L +A+  L  E+ PPD ++
Sbjct: 624 LAKVPALLVVGKKEAETRAVSIRRLGREGQTVLPLDEALQALAAEATPPDVKR 676


>gi|170748342|ref|YP_001754602.1| threonyl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831]
 gi|170654864|gb|ACB23919.1| threonyl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831]
          Length = 675

 Score =  719 bits (1855), Expect = 0.0,   Method: Composition-based stats.
 Identities = 386/647 (59%), Positives = 501/647 (77%), Gaps = 1/647 (0%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           LTFPDG+ +      TG  V E I++SLAK+ VA+A++G V DL DP+ R+  IE +   
Sbjct: 4   LTFPDGNTREIAAGTTGRAVVEGIAKSLAKRTVAMALDGTVADLDDPIDRDARIEFLDRT 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           DPRSL +IRH CAH++AEAVQ++WPE QV IGP+IE+GFYYDF +E PF+ ++  +IE K
Sbjct: 64  DPRSLELIRHDCAHVLAEAVQALWPETQVTIGPVIENGFYYDFHRETPFTPEDFPKIEAK 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+EIIARD+PF K+  + +  R LF  K E +KVE++++IP  E++ +YRQG+WFDLCRG
Sbjct: 124 MREIIARDAPFTKEVWTRDDVRGLFAGKGEGFKVELVDAIPPGEDLKIYRQGDWFDLCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PH+ STG+V   FKLMKVAGAYWRGDSN PML+RIYGTAW  Q +L  YL+ LEE+E+RD
Sbjct: 184 PHMTSTGKVGTAFKLMKVAGAYWRGDSNNPMLTRIYGTAWANQADLDDYLHRLEEAERRD 243

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHLW 305
           HR+L REMDLFH  E+G GV+FWH KGW IFQ LI+YMRR+++ DY E+N PQ+LD+ LW
Sbjct: 244 HRRLGREMDLFHFQEEGPGVVFWHAKGWTIFQELIAYMRRRLRGDYAEVNAPQILDKALW 303

Query: 306 QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEF 365
           + SGHW  YR NMFA + A +  +D R FALKPMNCPGHV +F HGLKSYR+LP+R+AEF
Sbjct: 304 ETSGHWGWYRENMFAAQSAGEEAEDKRWFALKPMNCPGHVQIFKHGLKSYRDLPLRMAEF 363

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
           G V+R EPSG++HGLMRVRGFTQDDAHVFCT++Q+ +ECLKI++LI+S Y DFGF++I+V
Sbjct: 364 GIVHRYEPSGAMHGLMRVRGFTQDDAHVFCTEDQLADECLKINDLILSTYADFGFDQIVV 423

Query: 426 KLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKD 485
           KLSTRPEKRVGSDALWD AE++M  VL  I+  S  RI T V  GEGAFYGPKFEY+L+D
Sbjct: 424 KLSTRPEKRVGSDALWDHAEDVMTRVLAQIEEQSGGRIRTAVNPGEGAFYGPKFEYVLRD 483

Query: 486 AIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           AIGRDWQCGT QVDFNLP RF AFY+++   +  PVM+HRA+ GS+ERF GI+IE+F G+
Sbjct: 484 AIGRDWQCGTTQVDFNLPERFGAFYIDADGARKPPVMVHRAICGSMERFTGILIEHFAGH 543

Query: 546 LPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPI 605
            PLWL+P+Q +V TIT  A  YA+++   L+   L +E D RNE INYK+REHS+ K+P+
Sbjct: 544 FPLWLAPVQVVVATITGEADAYARDVIRTLERAGLRVEADLRNEKINYKVREHSLAKVPV 603

Query: 606 IIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           ++  G +EA ER++ IRR GS  T+ + L +A+    +E+  PD ++
Sbjct: 604 LLALGRREAEERTVSIRRLGSQQTRTLPLTEAVAAFVEEATAPDIRR 650


>gi|182679322|ref|YP_001833468.1| threonyl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC
           9039]
 gi|182635205|gb|ACB95979.1| threonyl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC
           9039]
          Length = 644

 Score =  719 bits (1855), Expect = 0.0,   Method: Composition-based stats.
 Identities = 377/650 (58%), Positives = 489/650 (75%), Gaps = 11/650 (1%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +TFPDG+ + F    +G D+A+SIS SLAKKA+A+++NG + DL+D V R+  IE I
Sbjct: 1   MISVTFPDGAARQFEPGVSGVDIAKSISPSLAKKALAMSLNGTLSDLADKVDRDARIEFI 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +DPR L +IRH  AH+MAEAVQ+++P  QV IGP+IE+GFYYDF + +PF+  + A I
Sbjct: 61  TRDDPRGLDLIRHDAAHVMAEAVQTLYPGTQVTIGPVIENGFYYDFYRNEPFTPADFAAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EKKM EIIARD PF K+  S ++A+  FE+  EA+KVE+++SIP  E++ +YRQGEW DL
Sbjct: 121 EKKMGEIIARDKPFTKEVWSRDEAKAWFETHGEAFKVELVDSIPGNEDLKIYRQGEWLDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ STG++   FKLMKVAGAYWRGD  +PML RIY TA+  +QEL  YL  LEE+E
Sbjct: 181 CRGPHLPSTGKIGTAFKLMKVAGAYWRGDHTKPMLQRIYATAFANKQELDAYLKQLEEAE 240

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLD 301
           KRDHR+L REMDLFH  E+G G +FWH KGW +FQTLISYM RR+ +  Y E+NTPQVLD
Sbjct: 241 KRDHRRLGREMDLFHFQEEGPGTVFWHPKGWTLFQTLISYMRRRQQEAGYVEVNTPQVLD 300

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW +YR NMF       T +D R FALKPMNCPGHV +F +GLKSYR+LP++
Sbjct: 301 RALWETSGHWSTYRENMFIT-----TTEDERVFALKPMNCPGHVQIFKNGLKSYRDLPLK 355

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AEFG V+R EPSG+LHG+MRVR FTQDDAH+FCT++Q+ +E LKI++LI+SIY+DFGFE
Sbjct: 356 IAEFGVVHRYEPSGALHGVMRVRAFTQDDAHIFCTEDQIMDEVLKINDLILSIYRDFGFE 415

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            I++KLSTRPEKRVGSD  WD AE  +  VL+ +     ++  TG+  GEGAFYGPK EY
Sbjct: 416 DIVIKLSTRPEKRVGSDEAWDKAEAALTRVLEKLG----NQFKTGINPGEGAFYGPKLEY 471

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L+DAIGR+WQCGT QVDFNLP RF AFY+    +K  PVMIHRA+FGS+ERF GI+IE+
Sbjct: 472 TLRDAIGREWQCGTTQVDFNLPGRFGAFYIAPEGDKTVPVMIHRAMFGSLERFTGILIEH 531

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G+LPLWLSP+Q +V TIT    +YA E+    +   L ++ D RNE I YK+REHS+ 
Sbjct: 532 YAGHLPLWLSPLQIVVATITQEGDDYAYEVMAAARKRGLRVDGDLRNEKITYKVREHSLA 591

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           K+P++ + G KEA+ER++ IRR GS     + L  A+ +L  E+ PPD +
Sbjct: 592 KVPVLFVLGKKEAAERTVSIRRLGSNDQISLGLEQALELLAAEATPPDLR 641


>gi|49475537|ref|YP_033578.1| threonyl-tRNA synthetase [Bartonella henselae str. Houston-1]
 gi|73919770|sp|Q6G3K1|SYT_BARHE RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|49238343|emb|CAF27567.1| Threonyl-tRNA synthetase [Bartonella henselae str. Houston-1]
          Length = 658

 Score =  718 bits (1853), Expect = 0.0,   Method: Composition-based stats.
 Identities = 399/654 (61%), Positives = 514/654 (78%), Gaps = 2/654 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSI 59
           M   + L+FPDGS +++    TG ++AESIS+SLAKKA+A ++NG + DLSDP+++ G I
Sbjct: 1   MSCSVSLSFPDGSKRDYHSEMTGLELAESISKSLAKKALAYSLNGIIRDLSDPIKQSGQI 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT ED R+L +IRH CAH++AEAVQ ++P  QV IGP+IE+GFYYDF ++QPF+ D+L
Sbjct: 61  EIITREDTRALELIRHDCAHVLAEAVQELFPGTQVTIGPVIENGFYYDFARQQPFTLDDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM+EII R+ PF K+  S +KARE+F  K E YKVE+++SIP  +++ +Y QG+W
Sbjct: 121 TIIEKKMREIIQRNKPFRKEVWSRKKAREIFSEKGELYKVELIDSIPDNQDLKVYYQGDW 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPH++STGQ+   FKLMKVAGAYWRGD+N PML+RIYGTA+  + +L  YL+ LE
Sbjct: 181 FDLCRGPHMQSTGQIGNAFKLMKVAGAYWRGDANNPMLTRIYGTAFANENDLKAYLHMLE 240

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQ 298
           E+EKRDHR+L REM+LFH  E+G G+IFWH+KGWK+FQ LI+YMRR++ D  Y E+N PQ
Sbjct: 241 EAEKRDHRRLGREMNLFHFQEEGPGMIFWHKKGWKMFQNLINYMRRRLDDHQYAEVNAPQ 300

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           VLD+ LW+ SGHW+ Y+ NMF    A +   +   +ALKPMNCPGHV +F HGLKSYR+L
Sbjct: 301 VLDRSLWEISGHWEWYKENMFKAIPAAEDWDNENVYALKPMNCPGHVQIFKHGLKSYRDL 360

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P R+AEFG V+R EPSGSLHGLMRVR FTQDDAH+FCT EQ+ +ECL I++LI+S Y DF
Sbjct: 361 PTRIAEFGVVHRYEPSGSLHGLMRVRCFTQDDAHIFCTDEQLADECLNINDLILSTYADF 420

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF++I +KLSTRPEKRVGSDALWD AENIM+ VL TI+  S  +I T +L GEGAFYGPK
Sbjct: 421 GFKEISLKLSTRPEKRVGSDALWDHAENIMESVLKTIETKSAGQIKTSILPGEGAFYGPK 480

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           FEY LKDAIGR+WQCGT Q+DFNLP RFNAFY++  SEK  PVMIHRA+FGS+ERF+GI+
Sbjct: 481 FEYTLKDAIGREWQCGTTQLDFNLPERFNAFYIDKDSEKRQPVMIHRAIFGSMERFLGIL 540

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IENF G++PLW +P Q +V TITS A EYA+++   LKS  LS   D RNE INYKIREH
Sbjct: 541 IENFSGHMPLWFAPEQIVVATITSEANEYAKKLTAKLKSVGLSTTLDLRNEKINYKIREH 600

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           S++K+P+I++CG +E+   S+ +RR GST    +S+ + I  L  E+ PPD ++
Sbjct: 601 SLQKVPVILVCGKRESETNSVNMRRLGSTEQIFLSVEEVIEQLKNEATPPDLRR 654


>gi|323702723|ref|ZP_08114384.1| threonyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
 gi|323532386|gb|EGB22264.1| threonyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
          Length = 636

 Score =  717 bits (1851), Expect = 0.0,   Method: Composition-based stats.
 Identities = 288/643 (44%), Positives = 419/643 (65%), Gaps = 16/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            +K+T  DGS++ +P   T  +VA+SIS+ LA++A+   +NG+  DLS P+  + ++E++
Sbjct: 1   MVKVTLKDGSVREYPAGTTVLEVAKSISQGLAREALVGKVNGRTVDLSYPIKEDATLELL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T  D     V RHS AH++A+AV+ ++P+ ++AIGP I+DGFYYDFD ++PF+  EL QI
Sbjct: 61  TFNDEEGRHVYRHSTAHVLAQAVKRLFPDTKLAIGPAIQDGFYYDFDVDRPFTPAELEQI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M +II  D PF +  +S E+A E F    E YKVE++  +P    ++ Y+QG++ DL
Sbjct: 121 EAEMNKIIKEDLPFERVEISREEALERFGKAGEIYKVELINDLPEDAVISCYKQGDFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPHV STG++K   KLM +AGAYWRG     ML RIYGT++  +  L ++L+ +EE++
Sbjct: 181 CAGPHVPSTGRLKSI-KLMNIAGAYWRGSEKNKMLQRIYGTSFPKKALLDEHLFRIEEAK 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD 301
           +RDHRKL +E+DLF I ++G G  F+H KG  +   L ++ RR+ K   Y+EI TP +L+
Sbjct: 240 RRDHRKLGQELDLFSIQDEGPGFPFFHPKGMVLRNELENFWRREHKKRGYQEIRTPIILN 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+QSGHW  Y+ NM+  K       D   +A+KPMNCPG + V+   + SYR+LP+R
Sbjct: 300 RSLWEQSGHWAHYKENMYFTKI------DDADYAVKPMNCPGSILVYKTRMHSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAE G V+R+E SG+LHGLMRVR FTQDDAH+F    Q+ +E + + +L    YK FG  
Sbjct: 354 LAELGLVHRHELSGALHGLMRVRCFTQDDAHIFMLPSQIKDEIIGVIDLFEYFYKTFGLS 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPEK +GSD +W+ A   ++  L+         +   V  G+GAFYGPK ++
Sbjct: 414 YH-VELSTRPEKSMGSDEIWELATRSLQDALEA------KNMPYKVNEGDGAFYGPKIDF 466

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L D++GR WQCGTIQ+DF +P +F+  YV    +K  PVMIHR VFGSIERFIGI+ E+
Sbjct: 467 HLTDSLGRTWQCGTIQLDFQMPEKFDLTYVGEDGQKHRPVMIHRVVFGSIERFIGILTEH 526

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           F G  P+WL+P+Q  V  IT    +YA+E+   L +  + +E D RNE INYKIRE   +
Sbjct: 527 FAGAFPVWLAPVQVKVLPITDKHHDYARELVQKLDAMDIRVELDARNEKINYKIREAQTQ 586

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIP +++ GD+E    ++ +R+ G      V + + I  +  E
Sbjct: 587 KIPYMLVIGDREMENGTVAVRQRGKGDIGAVKMDEFIAKIEDE 629


>gi|325528727|gb|EGD05797.1| threonyl-tRNA synthetase [Burkholderia sp. TJI49]
          Length = 635

 Score =  716 bits (1849), Expect = 0.0,   Method: Composition-based stats.
 Identities = 313/643 (48%), Positives = 440/643 (68%), Gaps = 15/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +  PDGS++ +    T ++VA SI   LAK A+   ++G++ D S  + R+ S+ I+
Sbjct: 1   MVSIRLPDGSVRQYEHPVTVAEVAASIGPGLAKAALGGKLDGELVDTSTVIDRDASLAIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   L +IRHS AH++A AV+ ++P+ QV IGP+I++GFYYDF   +PF+ ++L +I
Sbjct: 61  TDKDADGLDIIRHSTAHLLAYAVKELYPDAQVTIGPVIDNGFYYDFSYNRPFTPEDLEKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+MQE+  +D P  ++ +S ++A   F S  E YK EI+ESIP  + + LY  G + DL
Sbjct: 121 EKRMQELAKKDEPVTRRVVSRDEAAGYFRSIGEKYKAEIIESIPQSDEIKLYSHGGFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG++K F KLMKVAGAYWRGDS    L RIYGTAW  +++  QYL+ LEE+E
Sbjct: 181 CRGPHVPSTGKLKVF-KLMKVAGAYWRGDSKNEQLQRIYGTAWTKKEDQDQYLHMLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL +++DLFH+ E+  G++FWH KGW ++Q +  YMRR++ +  Y EI TP ++D
Sbjct: 240 KRDHRKLGKQLDLFHMQEESPGMVFWHPKGWALWQQVEQYMRRRVNEAGYLEIKTPMIMD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW +YR NMF       T  + R +A+KPMNCPGHV VF HGL+SYR+LP+R
Sbjct: 300 RSLWEASGHWQNYRENMFT------TESEKRDYAIKPMNCPGHVQVFKHGLRSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
            AEFGS +RNE SG+LHGLMRVRGF QDDAH+FCT+EQ   E +  + L +S+YKDFGFE
Sbjct: 354 YAEFGSCHRNEASGALHGLMRVRGFVQDDAHIFCTEEQFIAESIAFNTLAMSVYKDFGFE 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            I +KLS RPE+R G+D  WD AE  ++  L     S ++      L GEGAFYGPK EY
Sbjct: 414 HIDIKLSLRPEQRAGTDETWDRAEQGLRDALTACGLSWEE------LPGEGAFYGPKIEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+GR WQCGT+Q+D  LP R  A YV   + +  PVM+HRA+ GS+ERF+GI+IE+
Sbjct: 468 HIKDALGRSWQCGTLQLDMVLPERLGAEYVAEDNSRRRPVMLHRAIVGSMERFLGILIEH 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G +P WL+PIQ +V  I  S  +YAQ +A  L+   + +  D RNE I+YKIREH+++
Sbjct: 528 HAGAMPAWLAPIQVVVMNIAESQADYAQSLAQTLQKQGVRVTADLRNEKISYKIREHTLE 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K+P +++ GDKE   +++ +R  G      + +   +  L ++
Sbjct: 588 KVPYLLVVGDKERDAQTVAVRARGGVDLGVMPVEAFVERLQED 630


>gi|83594816|ref|YP_428568.1| threonyl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170]
 gi|123753041|sp|Q2RNL4|SYT_RHORT RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|83577730|gb|ABC24281.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Rhodospirillum
           rubrum ATCC 11170]
          Length = 643

 Score =  716 bits (1849), Expect = 0.0,   Method: Composition-based stats.
 Identities = 318/650 (48%), Positives = 450/650 (69%), Gaps = 14/650 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            + ++ PDGS++++    TG  +AE I   LAK A+AV I+G + DLS P+  + S+ +I
Sbjct: 1   MVAISLPDGSVRSYEGPVTGRQIAEDIGPGLAKAALAVTIDGTMKDLSVPITTDASVSLI 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T  D  +L ++RH  AH+MA+AVQ ++P  QV IGP IE+GFYYDF + +PF+ ++L +I
Sbjct: 61  TARDAAALELLRHDAAHVMAQAVQELYPGTQVTIGPAIENGFYYDFARAEPFTPEDLERI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E++M+EI+ RD P +++    ++A   F    E YK E++  +PA E+V++YRQG+W DL
Sbjct: 121 EERMREIVGRDLPIVREVWERDEAIAYFTKLGETYKAELITGLPANEDVSVYRQGDWLDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ STG++   FKLMK+AGAYWRGDS  PML RIYGTAW  +++L  YL  L E+E
Sbjct: 181 CRGPHLPSTGKLGTAFKLMKLAGAYWRGDSRNPMLQRIYGTAWPDRKQLDAYLTMLAEAE 240

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD 301
           KRDHR++ +EMDLFH+ E+  G +FWH KGW +++TL +YMRR++    Y E+NTP ++D
Sbjct: 241 KRDHRRVGQEMDLFHLQEEAQGAVFWHPKGWTVYRTLQNYMRRRLDLAGYVEVNTPMLVD 300

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW++SGHW+ +R NMF  +  D      +  A+KPMNCP H+ +F  G+KSYR+LP+R
Sbjct: 301 RALWEKSGHWEKFRQNMFISEAED------KLLAMKPMNCPCHIQIFKQGIKSYRDLPLR 354

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AEFG+ +RNE SG+LHGLMRVR F QDDAH+FCT++Q+ +E     +L+ S+Y+D GF 
Sbjct: 355 MAEFGACHRNEASGALHGLMRVRAFVQDDAHIFCTEDQIVSETQAFCDLLKSVYRDLGFT 414

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
           +I VK S RPE R GSD  WD AE  ++   D         +   +  GEGAFYGPK E+
Sbjct: 415 EIKVKFSDRPEVRAGSDETWDKAEAALREATDAAG------LEWTLNPGEGAFYGPKLEF 468

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
           +L+DAIGRDWQCGT+QVDF LP R  A YV    +K  PVM+HRA+ G+ ERF+GI+IEN
Sbjct: 469 VLRDAIGRDWQCGTLQVDFVLPERLGADYVGEDGDKHRPVMLHRAILGTFERFMGILIEN 528

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G  P WL+P+Q +V TITS A +YA+ +   LK+  L    D RNE INYK+REHS+ 
Sbjct: 529 CAGRFPFWLAPVQVVVATITSDADDYARTVLAALKAKGLRAVADLRNEKINYKVREHSLA 588

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           K+P++++ G KEA    + +RR G  + + ++L +AI  L  ES+ PD +
Sbjct: 589 KVPVMLVVGRKEAETGGVALRRLGGQSQEVLALDEAIATLANESVAPDLR 638


>gi|206559848|ref|YP_002230612.1| threonyl-tRNA synthetase [Burkholderia cenocepacia J2315]
 gi|238693072|sp|B4E7I6|SYT_BURCJ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|198035889|emb|CAR51780.1| threonyl-tRNA synthetase [Burkholderia cenocepacia J2315]
          Length = 635

 Score =  716 bits (1849), Expect = 0.0,   Method: Composition-based stats.
 Identities = 311/643 (48%), Positives = 440/643 (68%), Gaps = 15/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +  PDGS++ +    T ++VA SI   LAK A+   ++G++ D S  + R+ S+ I+
Sbjct: 1   MVSIRLPDGSVRQYEHPVTVAEVAASIGPGLAKAALGGKLDGELVDTSTVIDRDASLAIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   L +IRHS AH++A AV+ ++P+ QV IGP+I++GFYYDF   +PF+ ++L +I
Sbjct: 61  TDKDADGLDIIRHSTAHLLAYAVKELYPDAQVTIGPVIDNGFYYDFSYNRPFTPEDLEKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+MQE+  +D P  ++ +S ++A   F S  E YK EI+ESIP  + + LY  G + DL
Sbjct: 121 EKRMQELAKKDEPVTRRVVSRDEAAGYFRSIGEKYKAEIIESIPQSDEIKLYSHGGFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG++K F KLMKVAGAYWRGDS    L RIYGTAW  +++  QYL+ LEE+E
Sbjct: 181 CRGPHVPSTGKLKVF-KLMKVAGAYWRGDSKNEQLQRIYGTAWTKKEDQDQYLHMLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL +++DLFH+ E+  G++FWH KGW ++Q +  YMRR++ +  Y EI TP ++D
Sbjct: 240 KRDHRKLGKQLDLFHMQEESPGMVFWHPKGWALWQQVEQYMRRRVNEAGYLEIKTPMIMD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW +YR NMF       T  + R +A+KPMNCPGHV VF HGL+SYR+LP+R
Sbjct: 300 RSLWEASGHWQNYRENMFT------TESEKRDYAIKPMNCPGHVQVFKHGLRSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
            AEFGS +RNE SG+LHGLMRVRGF QDDAH+FCT++Q  +E +  + L +S+YKDFGF+
Sbjct: 354 YAEFGSCHRNEASGALHGLMRVRGFVQDDAHIFCTEDQFISESIAFNTLAMSVYKDFGFD 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            I +KLS RP++R G+D  WD AE  ++  L          +    L GEGAFYGPK EY
Sbjct: 414 HIDIKLSLRPDQRAGTDETWDRAEQGLRDALTACG------LTWEELPGEGAFYGPKIEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+GR WQCGT+Q+D  LP R  A YV   + +  PVM+HRA+ GS+ERF+GI+IE+
Sbjct: 468 HIKDALGRSWQCGTLQLDMVLPERLGAEYVAEDNSRRRPVMLHRAIVGSMERFLGILIEH 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G +P+WL+P QAIV  I  S  EYAQ +A  L+   + +  D RNE I+YKIREH+++
Sbjct: 528 HAGAMPVWLAPYQAIVLNIAESQAEYAQSLAQSLQKQGVRVAADLRNEKISYKIREHTLE 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K+P +++ GDKE   +++ +R  G      + +   +  L ++
Sbjct: 588 KVPYLLVVGDKERDAQTVAVRARGGVDLGVMPVEAFVERLQED 630


>gi|161524952|ref|YP_001579964.1| threonyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|189350300|ref|YP_001945928.1| threonyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|238687005|sp|A9ABF9|SYT_BURM1 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|160342381|gb|ABX15467.1| threonyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|189334322|dbj|BAG43392.1| threonyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
          Length = 635

 Score =  716 bits (1847), Expect = 0.0,   Method: Composition-based stats.
 Identities = 314/643 (48%), Positives = 443/643 (68%), Gaps = 15/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +  PDGS++ +    T ++VA SI   LAK A+   ++G++ D S  +  + S+ I+
Sbjct: 1   MVSIRLPDGSVRQYEHPVTVAEVAASIGPGLAKAALGGKLDGELVDTSAVIDHDASLAIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +DP  L +IRHS AH++A AV+ ++P+ QV IGP+I++GFYYDF   +PF+ ++L +I
Sbjct: 61  TDKDPDGLDIIRHSTAHLLAYAVKELYPDAQVTIGPVIDNGFYYDFAYHRPFTPEDLEKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+MQE+  +D P  ++ +S ++A   F S  E YK EI+ESIP  + + LY  G + DL
Sbjct: 121 EKRMQELAKKDEPVTRRVVSRDEAAGYFRSIGEKYKAEIIESIPESDEIKLYSHGGFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG++K F KLMKVAGAYWRGDS    L RIYGTAW  +++  QYL+ LEE+E
Sbjct: 181 CRGPHVPSTGKLKVF-KLMKVAGAYWRGDSKNEQLQRIYGTAWTKKEDQDQYLHMLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL +++DLFH+ E+  G++FWH KGW ++Q +  YMRR++ +  Y EI TP ++D
Sbjct: 240 KRDHRKLGKQLDLFHMQEESPGMVFWHPKGWALWQQVEQYMRRRVNEAGYLEIKTPMIMD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW +YR NMF       T  + R +A+KPMNCPGHV VF HGL+SYR+LP+R
Sbjct: 300 RSLWEASGHWQNYRENMFT------TESEKRDYAIKPMNCPGHVQVFKHGLRSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
            AEFGS +RNE SG+LHGLMRVRGF QDDAH+FCT+EQ+  E +  + L +S+Y+DFGF+
Sbjct: 354 YAEFGSCHRNEASGALHGLMRVRGFVQDDAHIFCTEEQIIAESIAFNKLAMSVYRDFGFD 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            I +KLS RPE+R+GSD  WD AE  ++  L          +    L GEGAFYGPK EY
Sbjct: 414 HIDIKLSLRPEQRMGSDETWDRAEQGLREALTACG------LQWEELPGEGAFYGPKIEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+GR WQCGT+Q+D  LP R  A YV   + +  PVM+HRA+ GS+ERF+GI+IE+
Sbjct: 468 HIKDALGRSWQCGTLQLDMMLPERLGAEYVAEDNSRRRPVMLHRAIVGSMERFLGILIEH 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G +P+WL+P+QA+V  I  S VEYAQ +A  L+   L +  D RNE I+YKIREH+++
Sbjct: 528 HAGAMPVWLAPVQAVVLNIAESQVEYAQSLAQTLQKQGLRVTADLRNEKISYKIREHTLE 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K+P +++ GDKE   +++ +R  G      + +   +  L ++
Sbjct: 588 KVPYLLVVGDKERDAQTVAVRARGGVDLGVMPVEAFVERLQED 630


>gi|221197733|ref|ZP_03570779.1| threonyl-tRNA synthetase [Burkholderia multivorans CGD2M]
 gi|221204709|ref|ZP_03577726.1| threonyl-tRNA synthetase [Burkholderia multivorans CGD2]
 gi|221175566|gb|EEE07996.1| threonyl-tRNA synthetase [Burkholderia multivorans CGD2]
 gi|221181665|gb|EEE14066.1| threonyl-tRNA synthetase [Burkholderia multivorans CGD2M]
          Length = 635

 Score =  716 bits (1847), Expect = 0.0,   Method: Composition-based stats.
 Identities = 315/643 (48%), Positives = 443/643 (68%), Gaps = 15/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +  PDGS++ +    T ++VA SI   LAK A+   ++G++ D S  +  + S+ I+
Sbjct: 1   MVSIRLPDGSVRQYEHPVTVAEVAASIGPGLAKAALGGKLDGELVDTSAVIDHDASLAIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +DP  L +IRHS AH++A AV+ ++P+ QV IGP+I++GFYYDF   +PF+ ++L +I
Sbjct: 61  TDKDPDGLDIIRHSTAHLLAYAVKELYPDAQVTIGPVIDNGFYYDFAYHRPFTPEDLEKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+MQE+  +D P  ++ +S ++A   F S  E YK EI+ESIP  + + LY  G + DL
Sbjct: 121 EKRMQELAKKDEPVTRRVVSRDEAAGYFRSIGEKYKAEIIESIPESDEIKLYSHGGFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG++K F KLMKVAGAYWRGDS    L RIYGTAW  +++  QYL+ LEE+E
Sbjct: 181 CRGPHVPSTGKLKVF-KLMKVAGAYWRGDSKNEQLQRIYGTAWTKKEDQDQYLHMLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL +++DLFH+ E+  G++FWH KGW ++Q +  YMRR++ +  Y EI TP ++D
Sbjct: 240 KRDHRKLGKQLDLFHMQEESPGMVFWHPKGWALWQQVEQYMRRRVNEAGYLEIKTPMIMD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW +YR NMF       T  + R +A+KPMNCPGHV VF HGL+SYR+LP+R
Sbjct: 300 RSLWEASGHWQNYRENMFT------TESEKRDYAIKPMNCPGHVQVFKHGLRSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
            AEFGS +RNE SG+LHGLMRVRGF QDDAH+FCT+EQ   E +  + L +S+YKDFGFE
Sbjct: 354 YAEFGSCHRNEASGALHGLMRVRGFVQDDAHIFCTEEQFIAESIAFNTLAMSVYKDFGFE 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            I +KLS RPE+R G+D  WD AE  ++  L     S ++      L GEGAFYGPK EY
Sbjct: 414 HIDIKLSLRPEQRAGTDETWDRAEQGLRDALTACGLSWEE------LPGEGAFYGPKIEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+GR WQCGT+Q+D  LP R  A YV   + +  PVM+HRA+ GS+ERF+GI+IE+
Sbjct: 468 HIKDALGRSWQCGTLQLDMVLPERLGAEYVAEDNSRRRPVMLHRAIVGSMERFLGILIEH 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G +P+WL+P+QA+V  I  S VEYAQ +A  L+   + +  D RNE I+YKIREH+++
Sbjct: 528 HAGAMPVWLAPVQAVVLNIAESQVEYAQSLAQTLQKQGVRVTADLRNEKISYKIREHTLE 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K+P +++ GDKE   +++ +R  G      + +   +  L ++
Sbjct: 588 KVPYLLVVGDKERDAQTVAVRARGGVDLGVMPIEAFVERLQED 630


>gi|118591255|ref|ZP_01548654.1| threonyl-tRNA synthetase [Stappia aggregata IAM 12614]
 gi|118436331|gb|EAV42973.1| threonyl-tRNA synthetase [Stappia aggregata IAM 12614]
          Length = 656

 Score =  716 bits (1847), Expect = 0.0,   Method: Composition-based stats.
 Identities = 400/656 (60%), Positives = 511/656 (77%), Gaps = 8/656 (1%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            I+LTFPD S++ +    TG  VAE IS+SLAKKAVA+A++G++ DL+DP+     IEI+
Sbjct: 1   MIELTFPDNSVREYEPGTTGLAVAEGISKSLAKKAVAMALDGELKDLTDPISGNHQIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-------EQPFS 115
           T +DPR+L +IRH  AH+MAEAVQ +WP  QV IGP+IE+GFYYDF +       + PF+
Sbjct: 61  TRDDPRALELIRHDAAHVMAEAVQELWPGTQVTIGPVIENGFYYDFKRVHPDTGADWPFT 120

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            +EL  IEKKM+EII R + F K+  S ++A+  F +K E YKVE++++IP  + + +Y+
Sbjct: 121 PEELPVIEKKMREIIGRGAQFTKEVWSRDEAKRYFAAKGETYKVELVDAIPEDQELKIYK 180

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
           QG+W DLCRGPH+ ST Q+   FKLMKVAGAYWRGDSN  ML+RIY TAW++++EL  YL
Sbjct: 181 QGQWLDLCRGPHMVSTRQIGDAFKLMKVAGAYWRGDSNNEMLTRIYATAWHSEKELKAYL 240

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEIN 295
           + LEE+EKRDHRKL REMDLFH  E+G GV+FWH KGW +FQ+LI+Y RR +KD Y+E+N
Sbjct: 241 HMLEEAEKRDHRKLGREMDLFHFQEEGPGVVFWHPKGWDMFQSLIAYKRRVLKDTYKEVN 300

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
            PQVL   LW+ SGHW  Y+ NMF+V+CAD   +D R FALKPMNCPGHV +F HGLKSY
Sbjct: 301 APQVLHTSLWETSGHWTWYKENMFSVQCADPEAEDERVFALKPMNCPGHVQIFKHGLKSY 360

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           R+LP+RLAEFG V+R EPSG+LHGLMRVRGFTQDDAHVFCT+EQM +ECLKI++LI+S+Y
Sbjct: 361 RDLPMRLAEFGMVHRYEPSGALHGLMRVRGFTQDDAHVFCTEEQMADECLKINDLILSVY 420

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           +DFGF++I+VKLSTRPEKRVG+DA WD AE IM  VL  I+  S  R+ T +L GEGAFY
Sbjct: 421 EDFGFDEIVVKLSTRPEKRVGTDAAWDHAEAIMSDVLKQIEAQSGGRVKTDILPGEGAFY 480

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPKFEY L+DAIGR+WQCGT QVDFNLP RF AFYV+   EK  PVMIHRA+ GS+ERF+
Sbjct: 481 GPKFEYTLRDAIGREWQCGTTQVDFNLPERFGAFYVDKDGEKKTPVMIHRAICGSMERFL 540

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
           GI+IENF G+ PLW +P+Q +V TITS A +Y QE+A+LLK+  L +ETDFRNE INYK+
Sbjct: 541 GILIENFAGHFPLWFAPLQIVVATITSEADDYGQEVADLLKAKGLKVETDFRNEKINYKV 600

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           REHS+ K+P+II+CG +EA ER++ +RR GS     + L +AI    +E+ PPD +
Sbjct: 601 REHSLAKVPVIIVCGMREAEERTVNVRRLGSKDQTPMGLDEAIAAFVEEATPPDLK 656


>gi|162218055|ref|YP_620875.2| threonyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
 gi|162227933|ref|YP_835120.2| threonyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
 gi|254245609|ref|ZP_04938930.1| Threonyl-tRNA synthetase, class IIa [Burkholderia cenocepacia
           PC184]
 gi|124870385|gb|EAY62101.1| Threonyl-tRNA synthetase, class IIa [Burkholderia cenocepacia
           PC184]
          Length = 635

 Score =  715 bits (1845), Expect = 0.0,   Method: Composition-based stats.
 Identities = 310/643 (48%), Positives = 439/643 (68%), Gaps = 15/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +  PDGS++ +    T ++VA SI   LAK A+   ++G++ D S  + R+ S+ I+
Sbjct: 1   MVSIRLPDGSVRQYEHPVTVAEVAASIGPGLAKAALGGKLDGELVDTSTVIDRDASLAIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   L +IRHS AH++A AV+ ++P+ QV IGP+I++GFYYDF   +PF+ ++L +I
Sbjct: 61  TDKDADGLDIIRHSTAHLLAYAVKELYPDAQVTIGPVIDNGFYYDFSYNRPFTPEDLEKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+MQE+  +D P  ++ +S ++A   F S  E YK EI+ESIP  + + LY  G + DL
Sbjct: 121 EKRMQELAKKDEPVTRRVVSRDEAAGYFRSIGEKYKAEIIESIPQSDEIKLYSHGGFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG++K F KLMKVAGAYWRGDS    L RIYGTAW  +++  QYL+ LEE+E
Sbjct: 181 CRGPHVPSTGKLKVF-KLMKVAGAYWRGDSKNEQLQRIYGTAWTKKEDQDQYLHMLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL +++DLFH+ E+  G++FWH KGW ++Q +  YMRR++ +  Y EI TP ++D
Sbjct: 240 KRDHRKLGKQLDLFHMQEESPGMVFWHPKGWALWQQVEQYMRRRVNEAGYLEIKTPMIMD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW +YR NMF       T  + R +A+KPMNCPGHV VF HGL+SYR+LP+R
Sbjct: 300 RSLWEASGHWQNYRENMFT------TESEKRDYAIKPMNCPGHVQVFKHGLRSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
            AEFGS +RNE SG+LHGLMRVRGF QDDAH+FCT++Q  +E +  + L +S+YKDFGF+
Sbjct: 354 YAEFGSCHRNEASGALHGLMRVRGFVQDDAHIFCTEDQFISESIAFNTLAMSVYKDFGFD 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            I +KLS RP++R G+D  WD AE  ++  L          +    L GEGAFYGPK EY
Sbjct: 414 HIDIKLSLRPDQRAGTDETWDRAEQGLRDALTACG------LTWEELPGEGAFYGPKIEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+GR WQCGT+Q+D  LP R  A YV   + +  PVM+HRA+ GS+ERF+GI+IE+
Sbjct: 468 HIKDALGRSWQCGTLQLDMVLPERLGAEYVAEDNSRRRPVMLHRAIVGSMERFLGILIEH 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G +P+WL+P QAIV  I  S  EYAQ +   L+   + +  D RNE I+YKIREH+++
Sbjct: 528 HAGAMPVWLAPYQAIVLNIAESQAEYAQSLTQTLQKQGVRVAADLRNEKISYKIREHTLE 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K+P +++ GDKE   +++ +R  G      + +   +  L ++
Sbjct: 588 KVPYLLVVGDKERDAQTVAVRARGGVDLGVMPVEAFVERLQED 630


>gi|221214904|ref|ZP_03587872.1| threonyl-tRNA synthetase [Burkholderia multivorans CGD1]
 gi|221165131|gb|EED97609.1| threonyl-tRNA synthetase [Burkholderia multivorans CGD1]
          Length = 635

 Score =  715 bits (1845), Expect = 0.0,   Method: Composition-based stats.
 Identities = 315/643 (48%), Positives = 443/643 (68%), Gaps = 15/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +  PDGS++ +    T ++VA SI   LAK A+   ++G++ D S  +  + S+ I+
Sbjct: 1   MVSIRLPDGSVRQYEHPVTVAEVAASIGPGLAKAALGGKLDGELVDTSAVIDHDASLAIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +DP  L +IRHS AH++A AV+ ++P+ QV IGP+I++GFYYDF   +PF+ ++L +I
Sbjct: 61  TDKDPDGLDIIRHSTAHLLAYAVKELYPDAQVTIGPVIDNGFYYDFAYHRPFTPEDLEKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+MQE+  +D P  ++ +S ++A   F S  E YK EI+ESIP  + + LY  G + DL
Sbjct: 121 EKRMQELAKKDEPVTRRVVSRDEAAGYFRSIGEKYKAEIIESIPESDEIKLYSHGGFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG++K F KLMKVAGAYWRGDS    L RIYGTAW  +++  QYL+ LEE+E
Sbjct: 181 CRGPHVPSTGKLKVF-KLMKVAGAYWRGDSKNEQLQRIYGTAWTRKEDQDQYLHMLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL +++DLFH+ E+  G++FWH KGW ++Q +  YMRR++ +  Y EI TP ++D
Sbjct: 240 KRDHRKLGKQLDLFHMQEESPGMVFWHPKGWALWQQVEQYMRRRVNEAGYLEIKTPMIMD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW +YR NMF       T  + R +A+KPMNCPGHV VF HGL+SYR+LP+R
Sbjct: 300 RSLWEASGHWQNYRENMFT------TESEKRDYAIKPMNCPGHVQVFKHGLRSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
            AEFGS +RNE SG+LHGLMRVRGF QDDAH+FCT+EQ   E +  + L +S+YKDFGFE
Sbjct: 354 YAEFGSCHRNEASGALHGLMRVRGFVQDDAHIFCTEEQFIAESIAFNTLAMSVYKDFGFE 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            I +KLS RPE+R G+D  WD AE  ++  L     S ++      L GEGAFYGPK EY
Sbjct: 414 HIDIKLSLRPEQRAGTDETWDRAEQGLRDALTACGLSWEE------LPGEGAFYGPKIEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+GR WQCGT+Q+D  LP R  A YV   + +  PVM+HRA+ GS+ERF+GI+IE+
Sbjct: 468 HIKDALGRSWQCGTLQLDMVLPERLGAEYVAEDNSRRRPVMLHRAIVGSMERFLGILIEH 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G +P+WL+P+QA+V  I  S VEYAQ +A  L+   + +  D RNE I+YKIREH+++
Sbjct: 528 HAGAMPVWLAPVQAVVLNIAESQVEYAQSLAQTLQKQGVRVTADLRNEKISYKIREHTLE 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K+P +++ GDKE   +++ +R  G      + +   +  L ++
Sbjct: 588 KVPYLLVVGDKERDAQTVAVRARGGVDLGVMPVEAFVERLQED 630


>gi|134295547|ref|YP_001119282.1| threonyl-tRNA synthetase [Burkholderia vietnamiensis G4]
 gi|166223329|sp|A4JDU4|SYT_BURVG RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|134138704|gb|ABO54447.1| Ser-tRNA(Thr) hydrolase [Burkholderia vietnamiensis G4]
          Length = 635

 Score =  715 bits (1845), Expect = 0.0,   Method: Composition-based stats.
 Identities = 315/643 (48%), Positives = 440/643 (68%), Gaps = 15/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +  PDGS++ +    T ++VA SI   LAK A+   ++G++ D S  + R+ S+ I+
Sbjct: 1   MVSIRLPDGSVRQYEHPVTVAEVAASIGPGLAKAALGGKLDGELVDTSTVIDRDASLAIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   L +IRHS AH++A AV+ ++PE QV IGP+I++GFYYDF   +PF+ ++L +I
Sbjct: 61  TDKDADGLDIIRHSTAHLLAYAVKELYPEAQVTIGPVIDNGFYYDFAYNRPFTPEDLEKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+MQE+  +D P  ++ +S ++A   F S  E YK EI+ESIP  + + LY  G + DL
Sbjct: 121 EKRMQELAKKDEPVTRRVVSRDEAAGYFRSIGEKYKAEIIESIPQSDEIKLYSHGGFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG++K F KLMKVAGAYWRGDS    L RIYGTAW  +++  QYL+ LEE+E
Sbjct: 181 CRGPHVPSTGKLKVF-KLMKVAGAYWRGDSKNEQLQRIYGTAWTKKEDQDQYLHMLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD 301
           KRDHRKL +++DLFH+ E+  G++FWH KGW ++Q +  YMRR++    Y EI TP ++D
Sbjct: 240 KRDHRKLGKQLDLFHMQEESPGMVFWHPKGWALWQQVEQYMRRRVNDAGYLEIKTPMIMD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW +YR NMF       T  + R +A+KPMNCPGHV VF HGL+SYR+LP+R
Sbjct: 300 RSLWEASGHWQNYRENMFT------TESEKRDYAIKPMNCPGHVQVFKHGLRSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
            AEFGS +RNE SG+LHGLMRVRGF QDDAH+FCT++Q   E +  + L +S+YKDFGFE
Sbjct: 354 YAEFGSCHRNEASGALHGLMRVRGFVQDDAHIFCTEDQFIAESIAFNTLAMSVYKDFGFE 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            I +KLS RPE+R G+D  WD AE  ++  L     + Q+      L GEGAFYGPK EY
Sbjct: 414 HIDIKLSLRPEQRAGTDETWDRAEQGLRDALTACGLTWQE------LPGEGAFYGPKIEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+GR WQCGT+Q+D  LP R  A YV   + +  PVM+HRA+ GS+ERF+GI+IE+
Sbjct: 468 HIKDALGRSWQCGTLQLDMVLPERLGAEYVAEDNSRRRPVMLHRAIVGSMERFLGILIEH 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G +P+WL+P QAIV  I  S  EYAQ +A  L+   + +  D RNE I+YKIREH+++
Sbjct: 528 HAGAMPVWLAPFQAIVLNIAESQAEYAQSLAQTLQKQGVRVAADLRNEKISYKIREHTLE 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K+P +++ GDKE   +++ +R  G      + +   +  L ++
Sbjct: 588 KVPYLLVVGDKERDAQTVAVRARGGVDLGVMPVEAFVERLQED 630


>gi|167570156|ref|ZP_02363030.1| threonyl-tRNA synthetase [Burkholderia oklahomensis C6786]
          Length = 635

 Score =  715 bits (1845), Expect = 0.0,   Method: Composition-based stats.
 Identities = 314/643 (48%), Positives = 443/643 (68%), Gaps = 15/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +  PDGS++ +    T ++VA SI   LAK A+   ++G++ D S  + R+ S+ I+
Sbjct: 1   MVSIRLPDGSVRQYEHPVTVAEVAASIGPGLAKAALGGKLDGELVDTSTLIDRDASLAIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   L +IRHS AH++A AV+ ++P+ QV IGP+I++GFYYDF   +PF+ ++L +I
Sbjct: 61  TDKDADGLDIIRHSTAHLLAYAVKDLYPDAQVTIGPVIDNGFYYDFSYHRPFTPEDLEKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+MQE++ +D P  ++ +S ++A   F S  E YK EI+ESIPA + + LY  G + DL
Sbjct: 121 EKRMQELVKKDEPVTRRVVSRDEAVSYFRSIGEKYKAEIIESIPASDEIKLYAHGGFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG++K F KLMKVAGAYWRGDS    L RIYGTAW  +++   YL+ LEE+E
Sbjct: 181 CRGPHVPSTGKLKVF-KLMKVAGAYWRGDSKNEQLQRIYGTAWTKKEDQDAYLHMLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL +++DLFHI E+  G++FWH KGW ++Q +  YMRR++    Y EI TP ++D
Sbjct: 240 KRDHRKLGKQLDLFHIQEESPGMVFWHPKGWTLWQQVEQYMRRRLDAAGYLEIKTPMIMD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW +YR NMF       T  + R +A+KPMNCPGHV VF HGL+SYR+LP+R
Sbjct: 300 RSLWEASGHWQNYRENMFT------TESEKRDYAVKPMNCPGHVQVFKHGLRSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
            AEFGS +RNE SG+LHGLMRVRGF QDDAH+FCT+EQ+ +E +  + L +S+Y+DFGF+
Sbjct: 354 YAEFGSCHRNEASGALHGLMRVRGFVQDDAHIFCTEEQINSEAIAFNKLAMSVYEDFGFD 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
           +I +KLS RPE+R+GSD  WD AE+ ++  L          +    L GEGAFYGPK EY
Sbjct: 414 RIDIKLSLRPEQRMGSDETWDHAEDGLRKALKACG------VEWEELPGEGAFYGPKIEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+GR WQCGT+Q+D  LP R  A YV   + +  PVM+HRA+ GS+ERF+GI+IE+
Sbjct: 468 HIKDALGRSWQCGTLQLDMMLPERLGAEYVAEDNSRRRPVMLHRAIVGSMERFLGILIEH 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G +P WL+P  A+V  I  S VEYAQ +A  L+   L +  D RNE I+YKIREH+++
Sbjct: 528 HAGAMPAWLAPAHAVVLNIAESQVEYAQTVAQSLQKQGLRVSADLRNEKISYKIREHTLE 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K+P +++ GDKE   +++ +R  G      + +   +  L ++
Sbjct: 588 KVPYLLVVGDKEREAQTVAVRARGGVDLGVMPVEAFVERLRED 630


>gi|254252558|ref|ZP_04945876.1| Threonyl-tRNA synthetase [Burkholderia dolosa AUO158]
 gi|124895167|gb|EAY69047.1| Threonyl-tRNA synthetase [Burkholderia dolosa AUO158]
          Length = 635

 Score =  714 bits (1843), Expect = 0.0,   Method: Composition-based stats.
 Identities = 314/643 (48%), Positives = 440/643 (68%), Gaps = 15/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +  PDGS++ +    T ++VA SI   LAK A+   ++G++ D S  +  + S+ I+
Sbjct: 1   MVSIRLPDGSVRQYEHPVTVAEVAASIGPGLAKAALGGKLDGELVDTSTVIDHDASLAIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   L +IRHS AH++A AV+ ++P+ QV IGP+I++GFYYDF   +PF+ ++L +I
Sbjct: 61  TDKDADGLDIIRHSTAHLLAYAVKELYPDAQVTIGPVIDNGFYYDFAYHRPFTPEDLEKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+MQE+  +D P  ++ +S ++A   F S  E YK EI+ESIP  + + LY  G + DL
Sbjct: 121 EKRMQELAKKDEPVARRVVSRDEAAGYFRSIGEKYKAEIIESIPESDEIKLYSHGGFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG++K F KLMKVAGAYWRGDS    L RIYGTAW  +++  QYL+ LEE+E
Sbjct: 181 CRGPHVPSTGKLKVF-KLMKVAGAYWRGDSKNEQLQRIYGTAWTKKEDQDQYLHMLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD 301
           KRDHRKL +++DLFH+ E+  G++FWH KGW ++Q +  YMRR++    Y EI TP ++D
Sbjct: 240 KRDHRKLGKQLDLFHMQEESPGMVFWHPKGWALWQQVEQYMRRRVNDAGYLEIKTPMIMD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW +YR NMF       T  + R +A+KPMNCPGHV VF HGL+SYR+LP+R
Sbjct: 300 RSLWEASGHWQNYRENMFT------TESEKRDYAIKPMNCPGHVQVFKHGLRSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
            AEFGS +RNE SG+LHGLMRVRGF QDDAH+FCT+EQ   E +  + L +S+YKDFGFE
Sbjct: 354 YAEFGSCHRNEASGALHGLMRVRGFVQDDAHIFCTEEQFIAESIAFNTLAMSVYKDFGFE 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            I +KLS RPE+R G+D  WD AE  ++  L     S ++      L GEGAFYGPK EY
Sbjct: 414 HIDIKLSLRPEQRAGTDETWDRAEQGLRDALTACGLSWEE------LPGEGAFYGPKIEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+GR WQCGT+Q+D  LP R  A YV   + +  PVM+HRA+ GS+ERF+GI+IE+
Sbjct: 468 HIKDALGRSWQCGTLQLDMVLPERLGAEYVAEDNSRRRPVMLHRAIVGSMERFLGILIEH 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G +P+WL+PIQA+V  I  S  EYAQ +A  L+   + +  D RNE I+YKIREH+++
Sbjct: 528 HAGAMPVWLAPIQAVVLNIAESQAEYAQSLAQTLQKQGVRVTADLRNEKISYKIREHTLE 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K+P +++ GDKE   +++ +R  G      + +   +  L ++
Sbjct: 588 KVPYLLVVGDKERDAQTVAVRARGGVDLGVMPVDAFVERLQED 630


>gi|295677048|ref|YP_003605572.1| threonyl-tRNA synthetase [Burkholderia sp. CCGE1002]
 gi|295436891|gb|ADG16061.1| threonyl-tRNA synthetase [Burkholderia sp. CCGE1002]
          Length = 635

 Score =  714 bits (1842), Expect = 0.0,   Method: Composition-based stats.
 Identities = 308/643 (47%), Positives = 439/643 (68%), Gaps = 15/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +  PDGS++ +    T ++VA SI   LAK A+   I+G++ D S  + R+ ++ I+
Sbjct: 1   MVSIRLPDGSVRQYEHPVTVAEVAASIGPGLAKAALGGKIDGELVDTSALIDRDVALAIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   L +IRHS AH++A AV+ ++PE QV IGP+I++GFYYDF   +PF+ ++L +I
Sbjct: 61  TEKDADGLDIIRHSTAHLLAYAVKDLYPEAQVTIGPVIDNGFYYDFSYNRPFTPEDLEKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+MQE+  +D P  ++ +S ++A E F+   E YK EI+ESIPA + + LY  G + DL
Sbjct: 121 EKRMQELAKKDEPVSRRVVSRDEAVEYFKGIGEKYKAEIIESIPAGDEIKLYSHGGFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG++K F KLMKVAGAYWRGDS    L RIYGTAW  +++   YL+ LEE+E
Sbjct: 181 CRGPHVPSTGKLKVF-KLMKVAGAYWRGDSKNEQLQRIYGTAWTKKEDQEAYLHMLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD 301
           KRDHRKL +++DLFH+ ++  G++FWH +GW ++Q +  YMRR++    Y EI TP ++D
Sbjct: 240 KRDHRKLGKQLDLFHMQDESPGMVFWHPRGWTLWQQVEQYMRRRVNDAGYLEIKTPLIMD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW +YR NMF       T  + R +A+KPMNCPGHV VFNHGL+SYR+LP+R
Sbjct: 300 RSLWEASGHWQNYRENMFT------TESEKRDYAIKPMNCPGHVQVFNHGLRSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
            AEFGS +RNE SG+LHGLMRVRGF QDDAH+FCT++Q   E +  + L +S+Y+DFGF+
Sbjct: 354 YAEFGSCHRNESSGALHGLMRVRGFVQDDAHIFCTEDQFIGESIAFNTLAMSVYRDFGFD 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + +KLS RP+ R G+D  WD AE  ++  L          +    L GEGAFYGPK EY
Sbjct: 414 NVEIKLSLRPDARAGTDETWDRAEQGLREALTACG------VTWEELPGEGAFYGPKVEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+GR WQCGT+Q+D  LP R  A YV   + +  P+M+HRA+ GS+ERF+GI+IE+
Sbjct: 468 HIKDALGRSWQCGTLQLDMVLPERLGAEYVAEDNSRRRPIMLHRAIVGSMERFLGILIEH 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G +P WL+P+Q +V  I  S  EYAQ +A  L+   + +E D RNE I+YKIREH+++
Sbjct: 528 HAGAMPAWLAPMQVVVMNIAESQAEYAQSLAQSLQKQGVRVEADLRNEKISYKIREHTLE 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K+P +++ GDKE   +++ +R  G      + +   I  L ++
Sbjct: 588 KVPYLLVVGDKEREAQTVAVRARGGVDMGVMPVDAFIERLRQD 630


>gi|170732802|ref|YP_001764749.1| threonyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
 gi|238688618|sp|B1K091|SYT_BURCC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|169816044|gb|ACA90627.1| threonyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
          Length = 635

 Score =  714 bits (1842), Expect = 0.0,   Method: Composition-based stats.
 Identities = 309/643 (48%), Positives = 438/643 (68%), Gaps = 15/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +  PDGS++ +    T ++VA SI   LAK A+   ++G++ D S  + R+ S+ I+
Sbjct: 1   MVSIRLPDGSVRQYEHPVTVAEVAASIGPGLAKAALGGKLDGELVDTSTVIDRDASLAIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   L +IRHS AH++A AV+ ++P+ QV IGP+I++GFYYDF   +PF+ ++L +I
Sbjct: 61  TDKDADGLDIIRHSTAHLLAYAVKELYPDAQVTIGPVIDNGFYYDFSYNRPFTPEDLEKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+MQE+  +D P  ++ +S ++A   F S  E YK EI+ESIP  + + LY  G + DL
Sbjct: 121 EKRMQELAKKDEPVTRRVVSRDEAAGYFRSIGEKYKAEIIESIPQSDEIKLYSHGGFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG++K F KLMKVAGAYWRGDS    L RIYGTAW  +++  QYL+ LEE+E
Sbjct: 181 CRGPHVPSTGKLKVF-KLMKVAGAYWRGDSKNEQLQRIYGTAWTKKEDQDQYLHMLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL +++DLFH+ E+  G++FWH KGW ++Q +  YMRR++ +  Y EI TP ++D
Sbjct: 240 KRDHRKLGKQLDLFHMQEESPGMVFWHPKGWALWQQVEQYMRRRVNEAGYLEIKTPMIMD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW +YR NMF       T  + R +A+KPMNCPGHV VF HGL+SYR+LP+R
Sbjct: 300 RSLWEASGHWQNYRENMFT------TESEKRDYAIKPMNCPGHVQVFKHGLRSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
            AEFGS +RNE SG+LHGLMRVRGF QDDAH+FCT++Q  +E +  + L +S+YKDFGF+
Sbjct: 354 YAEFGSCHRNEASGALHGLMRVRGFVQDDAHIFCTEDQFISESIAFNTLAMSVYKDFGFD 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            I +KLS RP++R G+D  W  AE  ++  L          +    L GEGAFYGPK EY
Sbjct: 414 HIDIKLSLRPDQRAGTDETWARAEQGLRDALTACG------LTWEELPGEGAFYGPKIEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+GR WQCGT+Q+D  LP R  A YV   + +  PVM+HRA+ GS+ERF+GI+IE+
Sbjct: 468 HIKDALGRSWQCGTLQLDMVLPERLGAEYVAEDNSRRRPVMLHRAIVGSMERFLGILIEH 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G +P+WL+P QAIV  I  S  EYAQ +   L+   + +  D RNE I+YKIREH+++
Sbjct: 528 HAGAMPVWLAPYQAIVLNIAESQAEYAQSLTQTLQKQGVRVAADLRNEKISYKIREHTLE 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K+P +++ GDKE   +++ +R  G      + +   +  L ++
Sbjct: 588 KVPYLLVVGDKERDAQTVAVRARGGVDLGVMPVEAFVERLQED 630


>gi|323526736|ref|YP_004228889.1| threonyl-tRNA synthetase [Burkholderia sp. CCGE1001]
 gi|323383738|gb|ADX55829.1| threonyl-tRNA synthetase [Burkholderia sp. CCGE1001]
          Length = 635

 Score =  713 bits (1841), Expect = 0.0,   Method: Composition-based stats.
 Identities = 310/643 (48%), Positives = 444/643 (69%), Gaps = 15/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +  PDGS++ +    T ++VA SI   LAK A+   I+G++ D S  + R+ ++ I+
Sbjct: 1   MVSIRLPDGSVRQYEHPVTVAEVAASIGPGLAKAALGGKIDGELVDTSTLIDRDVALAIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   L +IRHS AH++A AV+ ++PE QV IGP+I++GFYYDF   +PF+ ++L +I
Sbjct: 61  TEKDADGLDIIRHSTAHLLAYAVKDLYPEAQVTIGPVIDNGFYYDFAYHRPFTPEDLERI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+MQE+  +D P  ++ +S ++A + F+S  E YK EI+ESIPA + + LY  G + DL
Sbjct: 121 EKRMQELAKKDEPVSRRVVSRDEAVDYFKSIGEKYKAEIIESIPASDEIKLYSHGGFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG++K F KLMKVAGAYWRGDS    L RIYGTAW  +++   YL+ LEE+E
Sbjct: 181 CRGPHVPSTGKLKVF-KLMKVAGAYWRGDSKNEQLQRIYGTAWTKKEDQDAYLHMLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL +++DLFH+ ++  G++FWH +GW ++Q +  YMRR++ +  Y EI TP ++D
Sbjct: 240 KRDHRKLGKQLDLFHMQDESPGMVFWHPRGWTLWQQVEQYMRRRVNEAGYLEIKTPMIMD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW +YR NMF       T  + R +A+KPMNCPGHV VFNHGL+SYR+LP+R
Sbjct: 300 RSLWEASGHWQNYRENMFT------TESEKRDYAIKPMNCPGHVQVFNHGLRSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
            AEFGS +RNE SG+LHGLMRVRGF QDDAH+FCT++Q  +E +  + L +S+YKDFGF+
Sbjct: 354 YAEFGSCHRNESSGALHGLMRVRGFVQDDAHIFCTEDQFISESIAFNTLAMSVYKDFGFD 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + +KLS RP+ R G+D  WD AE  ++  L     S ++      L GEGAFYGPK EY
Sbjct: 414 NVEIKLSLRPDARAGTDETWDRAEQGLREALTACGVSWEE------LPGEGAFYGPKVEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+GR WQCGT+Q+D  LP R  A YV   + +  P+M+HRA+ GS+ERF+GI+IE+
Sbjct: 468 HIKDALGRSWQCGTLQLDMVLPERLGAEYVAEDNSRRRPIMLHRAIVGSMERFLGILIEH 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G +P WL+P+Q +V  I  S  EYAQ +A  L+   + +E D RNE I+YKIREH+++
Sbjct: 528 HAGAMPAWLAPMQVVVMNIAESQAEYAQSLAQTLQKQGVRVEADLRNEKISYKIREHTLE 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K+P +++ GDKE   +++ +R  G      + +   I  L ++
Sbjct: 588 KVPYLLVVGDKEREAQTVAVRARGGVDLGVMPVDAFIERLRQD 630


>gi|167562968|ref|ZP_02355884.1| threonyl-tRNA synthetase [Burkholderia oklahomensis EO147]
          Length = 635

 Score =  713 bits (1841), Expect = 0.0,   Method: Composition-based stats.
 Identities = 314/643 (48%), Positives = 443/643 (68%), Gaps = 15/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +  PDGS++ +    T ++VA SI   LAK A+   ++G++ D S  + R+ S+ I+
Sbjct: 1   MVSIRLPDGSVRQYEHPVTVAEVAASIGPGLAKAALGGKLDGELVDTSALIDRDASLAIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   L +IRHS AH++A AV+ ++P+ QV IGP+I++GFYYDF   +PF+ ++L +I
Sbjct: 61  TDKDADGLDIIRHSTAHLLAYAVKDLYPDAQVTIGPVIDNGFYYDFSYHRPFTPEDLEKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+MQE++ +D P  ++ +S ++A   F S  E YK EI+ESIPA + + LY  G + DL
Sbjct: 121 EKRMQELVKKDEPVTRRVVSRDEAVSYFRSIGEKYKAEIIESIPASDEIKLYAHGGFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG++K F KLMKVAGAYWRGDS    L RIYGTAW  +++   YL+ LEE+E
Sbjct: 181 CRGPHVPSTGKLKVF-KLMKVAGAYWRGDSKNEQLQRIYGTAWTKKEDQDAYLHMLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL +++DLFHI E+  G++FWH KGW ++Q +  YMRR++    Y EI TP ++D
Sbjct: 240 KRDHRKLGKQLDLFHIQEESPGMVFWHPKGWTLWQQVEQYMRRRLDAAGYLEIKTPMIMD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW +YR NMF       T  + R +A+KPMNCPGHV VF HGL+SYR+LP+R
Sbjct: 300 RSLWEASGHWQNYRENMFT------TESEKRDYAVKPMNCPGHVQVFKHGLRSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
            AEFGS +RNE SG+LHGLMRVRGF QDDAH+FCT+EQ+ +E +  + L +S+Y+DFGF+
Sbjct: 354 YAEFGSCHRNEASGALHGLMRVRGFVQDDAHIFCTEEQINSEAIAFNKLAMSVYEDFGFD 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
           +I +KLS RPE+R+GSD  WD AE+ ++  L          +    L GEGAFYGPK EY
Sbjct: 414 RIDIKLSLRPEQRMGSDETWDHAEDGLRKALKACG------VEWEELPGEGAFYGPKIEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+GR WQCGT+Q+D  LP R  A YV   + +  PVM+HRA+ GS+ERF+GI+IE+
Sbjct: 468 HIKDALGRSWQCGTLQLDMMLPERLGAEYVAEDNSRRRPVMLHRAIVGSMERFLGILIEH 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G +P WL+P  A+V  I  S VEYAQ +A  L+   L +  D RNE I+YKIREH+++
Sbjct: 528 HAGAMPAWLAPAHAVVLNIAESQVEYAQTVAQSLQKQGLRVSADLRNEKISYKIREHTLE 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K+P +++ GDKE   +++ +R  G      + +   +  L ++
Sbjct: 588 KVPYLLVVGDKEREAQTVAVRARGGVDLGVMPVEAFVERLRED 630


>gi|78066086|ref|YP_368855.1| threonyl-tRNA synthetase [Burkholderia sp. 383]
 gi|123756187|sp|Q39H55|SYT_BURS3 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|77966831|gb|ABB08211.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Burkholderia
           sp. 383]
          Length = 635

 Score =  713 bits (1840), Expect = 0.0,   Method: Composition-based stats.
 Identities = 312/643 (48%), Positives = 440/643 (68%), Gaps = 15/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +  PDGS++ +    T ++VA SI   LAK A+   ++G++ D S  + R+ S+ I+
Sbjct: 1   MVSIRLPDGSVRQYEHPVTVAEVAASIGPGLAKAALGGKLDGELVDTSAVIDRDASLAIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   L +IRHS AH++A AV+ ++P+ QV IGP+I++GFYYDF   +PF+ ++L +I
Sbjct: 61  TDKDADGLDIIRHSTAHLLAYAVKELYPDAQVTIGPVIDNGFYYDFSYNRPFTPEDLEKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+MQE++ +D P  ++ +S ++A   F S  E YK EI+ESIP  + + LY  G + DL
Sbjct: 121 EKRMQELVKKDEPVTRRVVSRDEAAGYFRSIGEKYKAEIIESIPQSDEIKLYSHGGFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG++K F KLMKVAGAYWRGDS    L RIYGTAW  +++  QYL+ LEE+E
Sbjct: 181 CRGPHVPSTGKLKVF-KLMKVAGAYWRGDSKNEQLQRIYGTAWTRKEDQDQYLHMLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL +++DLFH+ E+  G++FWH KGW ++Q +  YMRR++ +  Y EI TP ++D
Sbjct: 240 KRDHRKLGKQLDLFHMQEESPGMVFWHPKGWALWQQVEQYMRRRVNEAGYLEIKTPMIMD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW +YR NMF       T  + R +A+KPMNCPGHV VF HGL+SYR+LP+R
Sbjct: 300 RSLWEASGHWQNYRENMFT------TESEKRDYAIKPMNCPGHVQVFKHGLRSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
            AEFGS +RNE SG+LHGLMRVRGF QDDAH+FCT++Q  +E +  + L +S+YKDFGF+
Sbjct: 354 YAEFGSCHRNEASGALHGLMRVRGFVQDDAHIFCTEDQFISESIAFNTLAMSVYKDFGFD 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            I +KLS RPE+R G+D  WD AE  ++  L          +    L GEGAFYGPK EY
Sbjct: 414 HIDIKLSLRPEQRAGTDETWDRAEQGLRDALTACG------LTWEELPGEGAFYGPKIEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+GR WQCGT+Q+D  LP R  A YV   S +  PVM+HRA+ GS+ERF+GI+IE+
Sbjct: 468 HIKDALGRSWQCGTLQLDMVLPERLGAEYVADDSSRRRPVMLHRAIVGSMERFLGILIEH 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G +P WL+P QA+V  I  S  EYAQ +A  L+   + +  D RNE I+YKIREH+++
Sbjct: 528 HAGAMPAWLAPFQAVVLNIAESQAEYAQSLAQSLQKQGVRVTADLRNEKISYKIREHTLE 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K+P +++ GDKE   +++ +R  G      + +   +  L ++
Sbjct: 588 KVPYLLVVGDKERDAQTVAVRARGGVDLGVMPVEAFVERLQED 630


>gi|73540970|ref|YP_295490.1| threonyl-tRNA synthetase [Ralstonia eutropha JMP134]
 gi|123732957|sp|Q472N7|SYT_RALEJ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|72118383|gb|AAZ60646.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Ralstonia
           eutropha JMP134]
          Length = 635

 Score =  713 bits (1840), Expect = 0.0,   Method: Composition-based stats.
 Identities = 321/645 (49%), Positives = 439/645 (68%), Gaps = 15/645 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +T PDGS + FP   T ++VA+SI   LAK A+A  ++G + D S  + R+ ++ II
Sbjct: 1   MIAITLPDGSRREFPGPVTVAEVAQSIGTGLAKAALAGKVDGNLVDTSYSIDRDVALAII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   + VIRHS AH++A AV+ ++P+ QV IGP+IE+GFYYDF  ++PF+ ++LA I
Sbjct: 61  TDKDADGVDVIRHSTAHLLAYAVKELYPDAQVTIGPVIENGFYYDFAYKRPFTPEDLAAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EKKM E+  +D    ++  + ++A  LFES  E YK EI+ SIPA + + LYR+G++ DL
Sbjct: 121 EKKMTELSRKDEKVTREVWNRDEAVALFESMGEKYKAEIIASIPADQEIGLYREGKFVDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG++K F KLMKVAGAYWRGD+N  ML RIYGTAW  +++   YL+ LEE+E
Sbjct: 181 CRGPHVPSTGKLKVF-KLMKVAGAYWRGDANNEMLQRIYGTAWAKKEDQEAYLHMLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLD 301
           KRDHRKL + +DLFH+ E+  G++FWH KGW+++Q +  YMR R     Y+E+ TPQV+D
Sbjct: 240 KRDHRKLGKSLDLFHLQEEAPGMVFWHPKGWQVWQAVEQYMRGRLTAAGYDEVRTPQVMD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW++SGHW +Y+ NMF       T  + R +A+KPMNCPGHV +FNHGL+SYR+LP+R
Sbjct: 300 RSLWEKSGHWQNYKENMFV------TESEKRDYAIKPMNCPGHVQIFNHGLRSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFG+ +RNEPSG+LHGLMRVRGF QDDAH+FCT+EQ+  E    + L  S+Y DFGF+
Sbjct: 354 LAEFGACHRNEPSGALHGLMRVRGFVQDDAHIFCTEEQIVAEAKAFNELAFSVYDDFGFK 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + VKLS RP +R GSD +WD AE  ++  L          ++   L GEGAFYGPK EY
Sbjct: 414 DVAVKLSLRPAQRAGSDEVWDHAEEGLRLALRACG------VDWEELPGEGAFYGPKVEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDAIGR WQCGT+Q+D  LP R  A YV   + +  PVM+HRA+ GS ERF+GI++EN
Sbjct: 468 HIKDAIGRSWQCGTLQLDLVLPERLGAEYVAEDNSRKRPVMLHRAILGSFERFLGILLEN 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G LP WL+P Q +V  I  S  EYA+ +   L       + D RNE I YKIREHS++
Sbjct: 528 HAGALPAWLAPEQVVVMNIAESQAEYAENVVQSLLKQGFRAKADLRNEKITYKIREHSLQ 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           KIP +++ GDKE     + +R  G+     + +   +  L ++  
Sbjct: 588 KIPYLLVVGDKERDANQVAVRARGNVDLGVMPVSAFVERLQQDVT 632


>gi|209516675|ref|ZP_03265528.1| threonyl-tRNA synthetase [Burkholderia sp. H160]
 gi|209502950|gb|EEA02953.1| threonyl-tRNA synthetase [Burkholderia sp. H160]
          Length = 635

 Score =  713 bits (1839), Expect = 0.0,   Method: Composition-based stats.
 Identities = 309/643 (48%), Positives = 441/643 (68%), Gaps = 15/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +  PDGS++ +    T ++VA SI   LAK A+   I+G++ D S  + R+ ++ I+
Sbjct: 1   MVSIRLPDGSVRQYEHPVTVAEVAASIGPGLAKAALGGKIDGELVDTSALIDRDVALAIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   L +IRHS AH++A AV+ ++PE QV IGP+I++GFYYDF   +PF+ ++L +I
Sbjct: 61  TEKDADGLDIIRHSTAHLLAYAVKDLYPEAQVTIGPVIDNGFYYDFSYNRPFTPEDLERI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+MQE+  +D P  ++ +S ++A E F+S  E YK EI+ESIPA + + LY  G + DL
Sbjct: 121 EKRMQELAKKDEPVSRRVVSRDEAVEYFKSIGEKYKAEIIESIPASDEIKLYSHGGFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG++K F KLMKVAGAYWRGDS    L RIYGTAW  +++   YL+ LEE+E
Sbjct: 181 CRGPHVPSTGKLKVF-KLMKVAGAYWRGDSKNEQLQRIYGTAWTKKEDQEAYLHMLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD 301
           KRDHRKL +++DLFH+ ++  G++FWH +GW ++Q +  YMRR++    Y EI TP ++D
Sbjct: 240 KRDHRKLGKQLDLFHMQDESPGMVFWHPRGWTLWQQVEQYMRRRVNDAGYLEIKTPLIMD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW +YR NMF       T  + R +A+KPMNCPGHV VFNHGL+SYR+LP+R
Sbjct: 300 RSLWEASGHWQNYRENMFT------TESEKRDYAIKPMNCPGHVQVFNHGLRSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
            AEFGS +RNE SG+LHGLMRVRGF QDDAH+FCT++Q  +E +  + L +S+Y+DFGF+
Sbjct: 354 YAEFGSCHRNESSGALHGLMRVRGFVQDDAHIFCTEDQFISESIAFNTLAMSVYRDFGFD 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + +KLS RP+ R G+D  WD AE  ++  L          +    L GEGAFYGPK EY
Sbjct: 414 NVEIKLSLRPDARAGTDETWDRAEQGLREALTACG------VTWEELPGEGAFYGPKVEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+GR WQCGT+Q+D  LP R  A YV   + +  P+M+HRA+ GS+ERF+GI+IE+
Sbjct: 468 HIKDALGRSWQCGTLQLDMVLPERLGAEYVAEDNSRRRPIMLHRAIVGSMERFLGILIEH 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G +P WL+P+Q +V  I  S  EYAQ +A  L+   + +E D RNE I+YKIREH+++
Sbjct: 528 HAGAMPAWLAPMQVVVMNIAESQAEYAQLLAQSLQKQGVRVEADLRNEKISYKIREHTLE 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K+P +++ GDKE   +++ +R  G      + +   I  L ++
Sbjct: 588 KVPYLLVVGDKEREAQTVAVRARGGVDLGVMPVDTFIERLRQD 630


>gi|296163127|ref|ZP_06845898.1| threonyl-tRNA synthetase [Burkholderia sp. Ch1-1]
 gi|295886629|gb|EFG66476.1| threonyl-tRNA synthetase [Burkholderia sp. Ch1-1]
          Length = 635

 Score =  712 bits (1838), Expect = 0.0,   Method: Composition-based stats.
 Identities = 307/643 (47%), Positives = 440/643 (68%), Gaps = 15/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +  PDGS++ +    T ++VA SI   LAK A+   I+G++ D S  +  + ++ I+
Sbjct: 1   MVSIRLPDGSVRQYEHPVTVAEVAASIGPGLAKAALGGKIDGELVDTSALIDHDVALAIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   L +IRHS AH++A AV+ ++PE QV IGP+I++GFYYDF   +PF+ ++L +I
Sbjct: 61  TEKDADGLDIIRHSTAHLLAYAVKDLYPEAQVTIGPVIDNGFYYDFAYNRPFTPEDLEKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E++MQE+  +D P  ++ +S ++A + F+S  E YK EI+ESIPA + + LY  G + DL
Sbjct: 121 ERRMQELAKKDEPVSRRVVSRDEAVDYFKSIGEKYKAEIIESIPATDEIKLYSHGGFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG++K F KLMKVAGAYWRGDS    L RIYGTAW  +++   YL+ LEE+E
Sbjct: 181 CRGPHVPSTGKLKVF-KLMKVAGAYWRGDSKNEQLQRIYGTAWTKKEDQEAYLHMLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD 301
           KRDHRKL +++DLFH+ ++  G++FWH +GW ++Q +  YMRR++    Y EI TP ++D
Sbjct: 240 KRDHRKLGKQLDLFHMQDESPGMVFWHPRGWTLWQQVEQYMRRRVNDAGYLEIKTPMIMD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW +YR NMF       T  + R +A+KPMNCPGHV VFNHGL+SYR+LP+R
Sbjct: 300 RSLWEASGHWQNYRENMFT------TESEKRDYAIKPMNCPGHVQVFNHGLRSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
            AEFGS +RNE SG+LHGLMRVRGF QDDAH+FCT++Q  +E +  + L +S+YKDFGF+
Sbjct: 354 YAEFGSCHRNESSGALHGLMRVRGFVQDDAHIFCTEDQFISESIAFNTLAMSVYKDFGFD 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + +KLS RP+ R G+D  WD AE  ++  L          +    L GEGAFYGPK EY
Sbjct: 414 NVEIKLSLRPDARAGTDETWDRAEQGLREALTACG------VTWEELPGEGAFYGPKVEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            ++DA+GR WQCGT+Q+D  LP R  A YV   + +  P+M+HRA+ GS+ERF+GI+IE+
Sbjct: 468 HIRDALGRSWQCGTLQLDMVLPERLGAEYVAEDNSRRRPIMLHRAIVGSMERFLGILIEH 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G +P WL+P+Q +V  I  S  EYAQ +A  L+   + +E D RNE I+YKIREH+++
Sbjct: 528 HAGAMPAWLAPMQVVVMNIAESQTEYAQSLAQSLQKQGVRVEADLRNEKISYKIREHTLE 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K+P +++ GDKE   +++ +R  G      + L   I  L ++
Sbjct: 588 KVPYLLVVGDKEREAQTVAVRARGGVDLGVMPLDTFIERLRQD 630


>gi|300023294|ref|YP_003755905.1| threonyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888]
 gi|299525115|gb|ADJ23584.1| threonyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888]
          Length = 650

 Score =  712 bits (1837), Expect = 0.0,   Method: Composition-based stats.
 Identities = 368/651 (56%), Positives = 492/651 (75%), Gaps = 7/651 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
           +D+ +TFPDG  +      TG ++A+SIS SLAK+ VA+ ++G + DL+DP+ ++ SI  
Sbjct: 2   TDVTITFPDGKQRQVKAGTTGLEIAKSISPSLAKRTVAMQLDGVLSDLADPINKDVSINF 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +   DP +L +IRH  AH+MAEAVQS+WP  QV IGP+I++GF+YDF K+QPF  +++ +
Sbjct: 62  VARTDPAALELIRHDAAHVMAEAVQSLWPGTQVTIGPVIDNGFFYDFAKQQPFEPEDIPK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEKKM EIIA+++ F K++ S + A++ F  K E +K+E++++IPA E++ +Y+QGEW D
Sbjct: 122 IEKKMGEIIAKNAAFTKEFWSRDDAKKFFRDKGEVFKIELVDAIPAGEDLKIYKQGEWLD 181

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ STGQ+ K FKLMK AGAYWRGDSN P L RIYGTA+ T+ EL  YL+ LEE+
Sbjct: 182 LCRGPHMTSTGQIGKAFKLMKFAGAYWRGDSNNPQLQRIYGTAFATEDELKAYLHQLEEA 241

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
           EKRDHRKL REMDLFH  E+  G +FWH KGW +FQTLI+YMRR+ +   YEE+N+P ++
Sbjct: 242 EKRDHRKLGREMDLFHFQEEAPGSVFWHAKGWTLFQTLIAYMRRQQQRAGYEEVNSPDMM 301

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++H W+ SGHW++Y  NMF     D+     R F  KPMNCPGHV ++ +GLKSYR+LP 
Sbjct: 302 EKHFWELSGHWENYGENMFTTVLPDE-----RVFCCKPMNCPGHVQIYKNGLKSYRDLPY 356

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AEFG V+R EPSG+LHG++RVR FTQDDAH+F T++Q+  ECLKI++L++SIYKDFGF
Sbjct: 357 RIAEFGKVHRYEPSGALHGMLRVRHFTQDDAHIFLTEDQIMEECLKINDLMLSIYKDFGF 416

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           E+I++KLSTRPEKRVG+D LWD AE  +  VLD +K  S   I T +  GEGAFYGPK E
Sbjct: 417 EEIVIKLSTRPEKRVGADELWDKAEKALGDVLDEVKRRSNGLIKTEIQPGEGAFYGPKLE 476

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           Y+LKDAIGRDWQCGT QVDFNL  R  AFY++ HSEK  PVM+HRA+FGS+ERF GI+IE
Sbjct: 477 YVLKDAIGRDWQCGTTQVDFNLAGRLGAFYIDEHSEKKTPVMVHRAMFGSLERFTGILIE 536

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           NF G+ PLWL+P+Q +V  I S A +YA E+A   K+  L +ETD RNE INYK+REHS+
Sbjct: 537 NFAGHFPLWLAPLQIVVAPIVSDANDYANEVAQKAKALGLRVETDLRNEKINYKVREHSL 596

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
            K+P++++ G +EA ER + +RR GS     +SL DA+  L  E++PPD +
Sbjct: 597 AKVPVLLVVGKREAEERKVSVRRLGSQDQTVMSLDDALKSLAAEAIPPDLR 647


>gi|90424612|ref|YP_532982.1| threonyl-tRNA synthetase [Rhodopseudomonas palustris BisB18]
 gi|90106626|gb|ABD88663.1| threonyl-tRNA synthetase [Rhodopseudomonas palustris BisB18]
          Length = 679

 Score =  711 bits (1836), Expect = 0.0,   Method: Composition-based stats.
 Identities = 379/647 (58%), Positives = 493/647 (76%), Gaps = 1/647 (0%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +TFPDG  + +P   TG D+A+SI+ SLAK+ VA+A++G + DL+DP+  +  I+ I  +
Sbjct: 28  VTFPDGKSREYPRGTTGLDIAKSIAPSLAKRTVAMAVDGVLTDLADPIAHDVKIDFIARD 87

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D R+L +IRH CAH++AEAVQ++WP  QV IGP IE+GFYYDF + +PF+ ++ A IEKK
Sbjct: 88  DARALELIRHDCAHVLAEAVQTLWPGTQVTIGPTIENGFYYDFFRNEPFTPEDFAAIEKK 147

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+EII RD PF K     EK +++F  K E +KVE++++IP  + + +Y QG+WFDLCRG
Sbjct: 148 MREIIGRDKPFTKDVWDREKTKQVFRDKGETFKVELVDAIPGNDLIKIYYQGDWFDLCRG 207

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PH+ STG++   FKLMKVAGAYWRGDSN PML+RIYGTA+  Q+EL  YL  +EE+EKRD
Sbjct: 208 PHMTSTGKIGTAFKLMKVAGAYWRGDSNNPMLTRIYGTAFAKQEELDAYLKQIEEAEKRD 267

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHLW 305
           HRKL RE+DLFH  E+G GV+FWH KGW IFQ LI+YMRR++  DY+E+N PQ+LD+ LW
Sbjct: 268 HRKLGRELDLFHFQEEGPGVVFWHAKGWTIFQALIAYMRRRLSGDYDEVNAPQILDKALW 327

Query: 306 QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEF 365
           + SGHW+ YR NMFA + A D  +D R FALKPMNCPGHV +F HGLKSYR+LP+R+AEF
Sbjct: 328 EISGHWEWYRENMFAAQSAGDEAEDKRWFALKPMNCPGHVQIFKHGLKSYRDLPLRMAEF 387

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
           G V+R EPSG++HGLMRVRGFTQDDAHVFCT+ Q+  ECLKI+ LI+S Y DFGF  I+V
Sbjct: 388 GIVHRYEPSGAMHGLMRVRGFTQDDAHVFCTEAQLAEECLKINELILSTYSDFGFGDIVV 447

Query: 426 KLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKD 485
           KLSTRPEKRVG+D +WD AE +M  VL  I+ +S  RI T +  GEGAFYGPKFEY+L+D
Sbjct: 448 KLSTRPEKRVGTDEMWDHAERVMATVLAEIEAASGGRIKTSINPGEGAFYGPKFEYVLRD 507

Query: 486 AIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           AIGRDWQCGT QVDFNLP RF AFY+++   K  PVM+HRA+ GS+ERFIGI+IE+F G+
Sbjct: 508 AIGRDWQCGTTQVDFNLPERFGAFYIDADGSKKAPVMVHRAICGSMERFIGILIEHFAGS 567

Query: 546 LPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPI 605
            PLWL+P+Q +VTTITS   +YA+ +A   +   L +E D RNE INYK+REHS+ KIP 
Sbjct: 568 FPLWLAPVQVVVTTITSEGDDYAKVVAAAARRAGLRVELDLRNEKINYKVREHSLAKIPA 627

Query: 606 IIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           +++ G KEA    + +RR GS     +   +AI  L +E++PPD ++
Sbjct: 628 MLVVGKKEAESHQVSVRRLGSEGQTVLPTNEAIAALVEEAVPPDVKR 674


>gi|187924732|ref|YP_001896374.1| threonyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
 gi|238689588|sp|B2SZG2|SYT_BURPP RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|187715926|gb|ACD17150.1| threonyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
          Length = 635

 Score =  711 bits (1836), Expect = 0.0,   Method: Composition-based stats.
 Identities = 308/643 (47%), Positives = 440/643 (68%), Gaps = 15/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +  PDGS++ +    T ++VA SI   LAK A+   I+G++ D S  +  + ++ I+
Sbjct: 1   MVSIRLPDGSVRQYEHPVTVAEVAASIGPGLAKAALGGKIDGELVDTSALIDHDVALAIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   L +IRHS AH++A AV+ ++PE QV IGP+I++GFYYDF   +PF+ ++L +I
Sbjct: 61  TEKDADGLDIIRHSTAHLLAYAVKDLYPEAQVTIGPVIDNGFYYDFAYNRPFTPEDLEKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+MQE+  +D P  ++ +S ++A + F+S  E YK EI+ESIPA +++ LY  G + DL
Sbjct: 121 EKRMQELAKKDEPVSRRVVSRDEAVDYFKSIGEKYKAEIIESIPATDDIKLYSHGGFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG++K F KLMKVAGAYWRGDS    L RIYGTAW  +++   YL+ LEE+E
Sbjct: 181 CRGPHVPSTGKLKVF-KLMKVAGAYWRGDSKNEQLQRIYGTAWTKKEDQEAYLHMLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD 301
           KRDHRKL +++DLFH+ ++  G++FWH +GW ++Q +  YMRR++    Y EI TP ++D
Sbjct: 240 KRDHRKLGKQLDLFHMQDESPGMVFWHPRGWTLWQQVEQYMRRRVNDAGYLEIKTPMIMD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW +YR NMF       T  + R +A+KPMNCPGHV VFNHGL+SYR+LP+R
Sbjct: 300 RSLWEASGHWQNYRENMFT------TESEKRDYAIKPMNCPGHVQVFNHGLRSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
            AEFGS +RNE SG+LHGLMRVRGF QDDAH+FCT++Q  +E +  + L +S+YKDFGF+
Sbjct: 354 YAEFGSCHRNESSGALHGLMRVRGFVQDDAHIFCTEDQFISESIAFNTLAMSVYKDFGFD 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + +KLS RP+ R G+D  WD AE  ++  L          +    L GEGAFYGPK EY
Sbjct: 414 NVEIKLSLRPDARAGTDETWDRAEQGLREALTACG------VTWEELPGEGAFYGPKVEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+GR WQCGT+Q+D  LP R  A YV   + +  P+M+HRA+ GS+ERF+GI+IE+
Sbjct: 468 HIKDALGRSWQCGTLQLDMVLPERLGAEYVAEDNSRRRPIMLHRAIVGSMERFLGILIEH 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G +P WL+P+Q +V  I  S  EYAQ +A  L+   + +E D RNE I+YKIREH+++
Sbjct: 528 HAGAMPAWLAPMQVVVMNIAESQAEYAQSLAQSLQKQGVRVEADLRNEKISYKIREHTLE 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K+P +++ GDKE   +++ +R  G      +     I  L ++
Sbjct: 588 KVPYLLVVGDKEREAQTVAVRARGGVDLGVMPPDTFIERLRQD 630


>gi|93353957|gb|ABF08046.1| threonyl-tRNA synthetase [Cupriavidus metallidurans CH34]
          Length = 663

 Score =  711 bits (1836), Expect = 0.0,   Method: Composition-based stats.
 Identities = 325/644 (50%), Positives = 446/644 (69%), Gaps = 15/644 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
             I +T PDGS + +P   T ++VA+SI   LAK A+A  ++G++ D S  + ++ S+ I
Sbjct: 28  KMIVITLPDGSRREYPGPVTVAEVAQSIGSGLAKAALAGKVDGRMVDTSFRIDQDASLSI 87

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +T +D   + VIRHS AH++A AV+ ++P+ QV IGP+I++GFYYDF  ++PF+ ++LA 
Sbjct: 88  VTDKDADGVDVIRHSTAHLLAYAVKELYPDAQVTIGPVIDNGFYYDFSYKRPFTPEDLAA 147

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEKKM E+  +D    ++  + ++A  LFES  E YK EI+ SIPA + + LYR+G + D
Sbjct: 148 IEKKMTELARKDEKVSREVWNRDEAVALFESMGEKYKAEIIASIPADQEIGLYREGSFVD 207

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG++K F KLMKVAGAYWRGDSN  ML RIYGTAW  +++   YL+ LEE+
Sbjct: 208 LCRGPHVPSTGKLKVF-KLMKVAGAYWRGDSNNEMLQRIYGTAWAKKEDQDAYLHMLEEA 266

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVL 300
           EKRDHR+L + +DLFH+ E+  G++FWH KGW+++Q +  YMR R  +  YEE+ TPQV+
Sbjct: 267 EKRDHRRLGKTLDLFHLQEEAPGMVFWHPKGWQVWQAVEQYMRGRLGQAGYEEVRTPQVM 326

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D+ LW++SGHWD+Y+ NMF       T  + R +A+KPMNCPGHV +FNHGL+SYR+LP+
Sbjct: 327 DRSLWERSGHWDNYKENMFV------TESEKRDYAIKPMNCPGHVQIFNHGLRSYRDLPL 380

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLAEFG+ +RNEPSG+LHGLMRVRGF QDDAH+FCT+EQ+  E    + L  SIY DFGF
Sbjct: 381 RLAEFGACHRNEPSGALHGLMRVRGFVQDDAHIFCTEEQIVEEAKAFNELAFSIYDDFGF 440

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           + + VKLS RPEKR GSDA+WD AE+ ++  L          +    L GEGAFYGPK E
Sbjct: 441 KDVAVKLSLRPEKRAGSDAVWDHAEDGLRLALRACG------VEWEELPGEGAFYGPKVE 494

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           Y +KDAIGR WQCGT+Q+D  LP R  A YV+  + +  PVM+HRA+ GS ERF+GI++E
Sbjct: 495 YHIKDAIGRSWQCGTLQLDLVLPERLGAEYVSEDNSRKRPVMLHRAILGSFERFLGILLE 554

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           N  G LP WL+P Q +V  I  S  EYA+ +  LL+      + D RNE I YKIREHS+
Sbjct: 555 NHAGALPAWLAPEQVVVMNIAESQSEYAENVVQLLQKQGFRAKADLRNEKITYKIREHSL 614

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +KIP +++ GDKE     + +R  G+     + +   +  L ++
Sbjct: 615 QKIPYLLVIGDKERDANQVAVRARGNVDLGVMPVSAFVERLQQD 658


>gi|167587363|ref|ZP_02379751.1| threonyl-tRNA synthetase [Burkholderia ubonensis Bu]
          Length = 635

 Score =  711 bits (1836), Expect = 0.0,   Method: Composition-based stats.
 Identities = 312/643 (48%), Positives = 441/643 (68%), Gaps = 15/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +  PDGS++ +    T ++VA SI   LAK A+   ++G++ D S  + R+ S+ I+
Sbjct: 1   MVSIRLPDGSVRQYEHPVTVAEVAASIGPGLAKAALGGKLDGELVDTSAVIDRDASLAIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   L +IRHS AH++A AV+ ++P+ QV IGP+I++GFYYDF   +PF+ ++L +I
Sbjct: 61  TDKDADGLDIIRHSTAHLLAYAVKELYPDAQVTIGPVIDNGFYYDFSYHRPFTPEDLEKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+MQEI  +D P  ++ +S ++A   F S  E YK EI+ESIP  + + LY  G + DL
Sbjct: 121 EKRMQEIAKKDEPVTRRVVSRDEAAGYFRSIGEKYKAEIIESIPQSDEIKLYSHGGFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG++K F KLMKVAGAYWRGDS    L RIYGTAW  +++  QYL+ LEE+E
Sbjct: 181 CRGPHVPSTGKLKVF-KLMKVAGAYWRGDSKNEQLQRIYGTAWTKKEDQDQYLHMLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL +++DLFH+ E+  G++FWH KGW ++Q +  YMRR++ +  Y EI TP ++D
Sbjct: 240 KRDHRKLGKQLDLFHMQEESPGMVFWHPKGWALWQQVEQYMRRRVNEAGYLEIKTPMIMD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW +YR NMF       T  + R +A+KPMNCPGHV VF HGL+SYR+LP+R
Sbjct: 300 RSLWEASGHWQNYRENMFT------TESEKRDYAIKPMNCPGHVQVFKHGLRSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
            AEFGS +RNE SG+LHGLMRVRGF QDDAH+FCT++Q  +E +  + L +S+YKDFGF+
Sbjct: 354 YAEFGSCHRNEASGALHGLMRVRGFVQDDAHIFCTEDQFISESIAFNTLAMSVYKDFGFD 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            I +KLS RP++R G+D  WD AE  ++  L     + ++      L GEGAFYGPK EY
Sbjct: 414 HIDIKLSLRPDQRAGTDETWDRAEQGLRDALTACGLAWEE------LPGEGAFYGPKIEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+GR WQCGT+Q+D  LP R  A YV   + +  PVM+HRA+ GS+ERF+GI+IE+
Sbjct: 468 HIKDALGRSWQCGTLQLDMVLPERLGAEYVAEDNSRRRPVMLHRAIVGSMERFLGILIEH 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G +P+WL+P QAIV  I  S  EYAQ +A  L+   +    D RNE I+YKIREH+++
Sbjct: 528 HAGAMPVWLAPFQAIVLNIAESQAEYAQSLAQTLQKQGVRAAADLRNEKISYKIREHTLE 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K+P +++ GDKE   +++ +R  G      + +   +  L ++
Sbjct: 588 KVPYLLVVGDKERDAQTVAVRARGGVDLGVMPVEAFVERLQED 630


>gi|114319929|ref|YP_741612.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Alkalilimnicola
           ehrlichii MLHE-1]
 gi|122312208|sp|Q0AAL5|SYT_ALHEH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|114226323|gb|ABI56122.1| Ser-tRNA(Thr) hydrolase [Alkalilimnicola ehrlichii MLHE-1]
          Length = 641

 Score =  711 bits (1836), Expect = 0.0,   Method: Composition-based stats.
 Identities = 311/646 (48%), Positives = 441/646 (68%), Gaps = 18/646 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SI 59
           MP+   +T PDGS + F    T  DVAESI + LA+ A+A  ++G++ DLS  + +   +
Sbjct: 1   MPA---ITLPDGSRREFDHPVTVRDVAESIGKGLARAALAGRVDGRLVDLSHRIDDDVQL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EI+T  DP  + +IRHS AH+MA+AV+ ++PE QV IGP+IE+GFYYDF  ++PF+ D+L
Sbjct: 58  EIVTDRDPDGVDMIRHSTAHLMAQAVKELFPEAQVTIGPVIENGFYYDFAYKRPFTEDDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM+E+  +D    ++    ++A   F  + E YK EI+E +P  E +++Y+QG++
Sbjct: 118 KAIEKKMEELARQDFEVHREVWDRDEAIRFFLEQGEQYKAEIIEDLPEHETISVYKQGDF 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV +TG++K F KL KVAGAYWRG S+  ML RIYGTAW  +++L  YL+ L 
Sbjct: 178 LDLCRGPHVPNTGKLKAF-KLQKVAGAYWRGKSDNEMLQRIYGTAWPDKKQLKAYLHRLA 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+EKRDHR++ R  +LFH+ E+  G+ FWH KGW+I+  +  Y+RR  +   Y+EI+TPQ
Sbjct: 237 EAEKRDHRRIGRAQNLFHLQEEAPGMAFWHPKGWQIYLEVQEYIRRLTRGHGYQEIHTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D+ LW++SGHWD ++ NMF       T  + R +A+KPMNCP HV V+N GLKSYR+L
Sbjct: 297 LVDRSLWEKSGHWDKFQDNMFI------TESESRDYAVKPMNCPCHVQVYNQGLKSYRDL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFGS +RNEPSG+LHGLMRVR F QDDAH+FCT++Q+  E     +L+   Y DF
Sbjct: 351 PLRLAEFGSCHRNEPSGTLHGLMRVRNFVQDDAHIFCTEDQIQQEVADFIDLVFKAYNDF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+ +++ LSTRP++RVG DALWD AE+ ++  L+         +   +  GEGAFYGPK
Sbjct: 411 GFDDVIIALSTRPDERVGEDALWDKAEHALEEALNRAG------LEWQLQPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD +GR WQ GTIQVDF++P R  A YV     K  PVM+HRA+ GS+ERFIGI+
Sbjct: 465 IEFTLKDCLGRTWQLGTIQVDFSMPGRLGATYVAEDGSKKVPVMLHRAILGSLERFIGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE++ G LP WL+P+QA+V  IT    EYA+ I    +   L ++ D RNE I +KIREH
Sbjct: 525 IEHYAGALPPWLAPVQAVVLNITDRQGEYARRIEKRFRERGLRVDADLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +++K+P +++ GDKE    ++ +R         +++ D +  L  E
Sbjct: 585 TLQKVPYMLVVGDKEVENNTVAVRTREGQDLGSMAVDDFLQRLESE 630


>gi|319943475|ref|ZP_08017757.1| threonine--tRNA ligase [Lautropia mirabilis ATCC 51599]
 gi|319743290|gb|EFV95695.1| threonine--tRNA ligase [Lautropia mirabilis ATCC 51599]
          Length = 636

 Score =  711 bits (1835), Expect = 0.0,   Method: Composition-based stats.
 Identities = 309/640 (48%), Positives = 437/640 (68%), Gaps = 15/640 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS + F    T + +A +I   LAK A+A  +NGK+ DLS  V  +  + I+T +
Sbjct: 4   ITLPDGSQRRFDDAVTVAQIAAAIGPGLAKAAIAGRVNGKLVDLSRTVSEDAEVAIVTDK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           DP  L +IRHS AH+MA AVQ ++PE QV IGP+IE+GFYYDF  ++PF+ ++LA IEK+
Sbjct: 64  DPEGLDIIRHSTAHLMAYAVQDLFPEAQVTIGPVIENGFYYDFAYKRPFTPEDLAAIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M E+   D   +++    ++A + FES  E YK EI+ SIPA+E +T YR+G + DLCRG
Sbjct: 124 MHELAKLDETVVREEWDRQEAVKYFESIGEKYKAEIIASIPAEEGITFYREGRFVDLCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV STG++K F KLMKVAGAYWRGD+N  ML RIYGTAW  +++   YL+ LEE+EKRD
Sbjct: 184 PHVPSTGKLKVF-KLMKVAGAYWRGDANNEMLQRIYGTAWARKEDQDAYLHMLEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHL 304
           HRKL +++DLFH   +  G++FWH +GW I+Q +  Y+R K + + Y+E+  PQ+LD  L
Sbjct: 243 HRKLGKDLDLFHTQAEAPGMVFWHPRGWTIWQRIEQYIREKYQKNGYQEVRCPQILDVDL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHWD+Y+ NMF       +  + R +A+KPMNCPGHV +FN  L+SYR+LP+R AE
Sbjct: 303 WKRSGHWDNYKENMFF------SESEKREYAVKPMNCPGHVQLFNASLRSYRDLPLRYAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNEPSG+LHG+MRVRGFTQDD H+FCT+EQ+  E    H   +++Y+DFGF  + 
Sbjct: 357 FGSCHRNEPSGALHGIMRVRGFTQDDGHIFCTEEQVEAEVTAFHQQAMAVYRDFGFTDVS 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           VKL+ RP +R+G+D  WD AEN ++  L     + ++      L GEGAFYGPK EY LK
Sbjct: 417 VKLALRPTQRLGTDEAWDRAENALRAALSACDVAWEE------LPGEGAFYGPKIEYHLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D+IGR WQ GTIQ D  +P R +A YV   + +  P+M+HRA+ GS+ERFIG++IE+  G
Sbjct: 471 DSIGRAWQVGTIQYDPMMPERLDAEYVAEDNSRRRPIMLHRAIVGSMERFIGMLIEHHAG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
            +P WL+P+Q  V T+T +A +YA++I   L      + +D R + I YKIREHS++KIP
Sbjct: 531 AMPTWLAPVQVAVLTVTDTAADYAEDIRQRLIKQGFRVISDLRGDKIGYKIREHSLQKIP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            +++ G+K+    ++ +R  G      +S      +L ++
Sbjct: 591 YLVVVGEKDRQAGTLAVRARGGKDLGSMSFEGFASLLAQQ 630


>gi|91784428|ref|YP_559634.1| threonyl-tRNA synthetase [Burkholderia xenovorans LB400]
 gi|123358618|sp|Q13WF7|SYT_BURXL RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|91688382|gb|ABE31582.1| Ser-tRNA(Thr) hydrolase [Burkholderia xenovorans LB400]
          Length = 635

 Score =  711 bits (1835), Expect = 0.0,   Method: Composition-based stats.
 Identities = 308/643 (47%), Positives = 439/643 (68%), Gaps = 15/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +  PDGS++ +    T ++VA SI   LAK A+   I+G++ D S  +  + ++ I+
Sbjct: 1   MVSIRLPDGSVRQYEHPVTVAEVAASIGPGLAKAALGGKIDGELVDTSALIDHDVALAIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   L +IRHS AH++A AV+ ++PE QV IGP+I++GFYYDF   +PF+ ++L +I
Sbjct: 61  TEKDADGLDIIRHSTAHLLAYAVKDLYPEAQVTIGPVIDNGFYYDFAYNRPFTPEDLEKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+MQE+  +D P  ++ +S ++A + F+S  E YK EI+ESIPA + + LY  G + DL
Sbjct: 121 EKRMQELAKKDEPVSRRVVSRDEAVDYFKSIGEKYKAEIIESIPATDEIKLYSHGGFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG++K F KLMKVAGAYWRGDS    L RIYGTAW  +++   YL+ LEE+E
Sbjct: 181 CRGPHVPSTGKLKVF-KLMKVAGAYWRGDSKNEQLQRIYGTAWTKKEDQEAYLHMLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD 301
           KRDHRKL +++DLFH+ ++  G++FWH +GW ++Q +  YMRR++    Y EI TP ++D
Sbjct: 240 KRDHRKLGKQLDLFHMQDESPGMVFWHPRGWTLWQQVEQYMRRRVNDAGYLEIKTPMIMD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW +YR NMF       T  + R +A+KPMNCPGHV VFNHGL+SYR+LP+R
Sbjct: 300 RSLWEASGHWQNYRENMFT------TESEKRDYAIKPMNCPGHVQVFNHGLRSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
            AEFGS +RNE SG+LHGLMRVRGF QDDAH+FCT++Q  +E +  + L +S+YKDFGF+
Sbjct: 354 YAEFGSCHRNESSGALHGLMRVRGFVQDDAHIFCTEDQFISESIAFNTLAMSVYKDFGFD 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + +KLS RP+ R G+D  WD AE  ++  L          +    L GEGAFYGPK EY
Sbjct: 414 HVEIKLSLRPDARAGTDETWDRAEQGLREALTACG------VTWEELPGEGAFYGPKVEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+GR WQCGT+Q+D  LP R  A YV   + +  P+M+HRA+ GS+ERF+GI+IE+
Sbjct: 468 HIKDALGRSWQCGTLQLDMVLPERLGAEYVAEDNSRRRPIMLHRAIVGSMERFLGILIEH 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G +P WL+P+Q +V  I  S  EYAQ +A  L+   + +  D RNE I+YKIREH+++
Sbjct: 528 HAGAMPAWLAPMQVVVMNIAESQTEYAQSLAQSLQKQGVRVAADLRNEKISYKIREHTLE 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K+P +++ GDKE   +++ +R  G      + L   I  L ++
Sbjct: 588 KVPYLLVVGDKEREAQTVAVRARGGVDLGVMPLDTFIERLRQD 630


>gi|171318442|ref|ZP_02907597.1| threonyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
 gi|171096356|gb|EDT41258.1| threonyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
          Length = 635

 Score =  711 bits (1834), Expect = 0.0,   Method: Composition-based stats.
 Identities = 313/643 (48%), Positives = 438/643 (68%), Gaps = 15/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +  PDGS++ +    T ++VA SI   LAK A+   ++G++ D S  + R+ ++ I+
Sbjct: 1   MVSIRLPDGSVRQYEHPVTVAEVAASIGPGLAKAALGGKLDGELVDTSTVIDRDAALAIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   L +IRHS AH++A AV+ ++P+ QV IGP+I++GFYYDF   +PF+ ++L +I
Sbjct: 61  TDKDADGLDIIRHSTAHLLAYAVKELYPDAQVTIGPVIDNGFYYDFSYNRPFTPEDLEKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+MQEI  +D P  ++ +S ++A   F S  E YK EI+ESIP  + + LY  G + DL
Sbjct: 121 EKRMQEIAKKDEPVTRRVVSRDEAAGYFRSIGEKYKAEIIESIPQSDEIKLYSHGGFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG++K F KLMKVAGAYWRGDS    L RIYGTAW  +++  QYL+ LEE+E
Sbjct: 181 CRGPHVPSTGKLKVF-KLMKVAGAYWRGDSKNEQLQRIYGTAWTKKEDQDQYLHMLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD 301
           KRDHRKL +++DLFH+ E+  G++FWH KGW ++Q +  YMRR++    Y EI TP ++D
Sbjct: 240 KRDHRKLGKQLDLFHMQEESPGMVFWHPKGWALWQQVEQYMRRRVNDAGYLEIKTPMIMD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW +YR NMF       T  + R +A+KPMNCPGHV VF HGL+SYR+LP+R
Sbjct: 300 RSLWEASGHWQNYRENMFT------TESEKRDYAIKPMNCPGHVQVFKHGLRSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
            AEFGS +RNE SG+LHGLMRVRGF QDDAH+FCT+EQ   E +  + L +S+YKDFGFE
Sbjct: 354 YAEFGSCHRNEASGALHGLMRVRGFVQDDAHIFCTEEQFIAESIAFNTLAMSVYKDFGFE 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            I +KLS RPE+R G+D  WD AE  ++  L     S ++      L GEGAFYGPK EY
Sbjct: 414 HIDIKLSLRPEQRAGTDETWDRAEQGLRDALTACGLSWEE------LPGEGAFYGPKIEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+GR WQCGT+Q+D  LP R  A YV   + +  PVM+HRA+ GS+ERF+GI+IE+
Sbjct: 468 HIKDALGRSWQCGTLQLDMVLPERLGAEYVAEDNSRRRPVMLHRAIVGSMERFLGILIEH 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G +P WL+P QA+V  I  S VEYA  +   L+   + +  D RNE I+YKIREH+++
Sbjct: 528 HAGAMPAWLAPFQAVVLNIAESQVEYAHSLTQTLQKQGVRVAGDLRNEKISYKIREHTLE 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K+P +++ GDKE   +++ +R  G      + +   +  L ++
Sbjct: 588 KVPYLLVVGDKERDAQTVAVRARGGVDLGVMPIEAFVERLQED 630


>gi|115351412|ref|YP_773251.1| threonyl-tRNA synthetase [Burkholderia ambifaria AMMD]
 gi|122323391|sp|Q0BG06|SYT_BURCM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|115281400|gb|ABI86917.1| Ser-tRNA(Thr) hydrolase [Burkholderia ambifaria AMMD]
          Length = 635

 Score =  711 bits (1834), Expect = 0.0,   Method: Composition-based stats.
 Identities = 314/643 (48%), Positives = 438/643 (68%), Gaps = 15/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +  PDGS++ +    T ++VA SI   LAK A+   ++G++ D S  + R+ ++ II
Sbjct: 1   MVSIRLPDGSVRQYEHPVTVAEVAASIGPGLAKAALGGKLDGELVDTSTVIDRDAALAII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   L +IRHS AH++A AV+ ++P+ QV IGP+I++GFYYDF   +PF+ ++L +I
Sbjct: 61  TDKDADGLDIIRHSTAHLLAYAVKELYPDAQVTIGPVIDNGFYYDFSYNRPFTPEDLEKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+MQEI  +D P  ++ +S ++A   F S  E YK EI+ESIP  + + LY  G + DL
Sbjct: 121 EKRMQEIAKKDEPVTRRVVSRDEAAGYFRSIGEKYKAEIIESIPQTDEIKLYSHGGFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG++K F KLMKVAGAYWRGDS    L RIYGTAW  +++  QYL+ LEE+E
Sbjct: 181 CRGPHVPSTGKLKVF-KLMKVAGAYWRGDSKNEQLQRIYGTAWTKKEDQDQYLHMLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD 301
           KRDHRKL +++DLFH+ E+  G++FWH KGW ++Q +  YMRR++    Y EI TP ++D
Sbjct: 240 KRDHRKLGKQLDLFHMQEESPGMVFWHPKGWALWQQVEQYMRRRVNDAGYLEIKTPMIMD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW +YR NMF       T  + R +A+KPMNCPGHV VF HGL+SYR+LP+R
Sbjct: 300 RSLWEASGHWQNYRENMFT------TESEKRDYAIKPMNCPGHVQVFKHGLRSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
            AEFGS +RNE SG+LHGLMRVRGF QDDAH+FCT+EQ   E +  + L +S+YKDFGFE
Sbjct: 354 YAEFGSCHRNEASGALHGLMRVRGFVQDDAHIFCTEEQFIAESIAFNTLAMSVYKDFGFE 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            I +KLS RPE+R G+D  WD AE  ++  L     S ++      L GEGAFYGPK EY
Sbjct: 414 HIDIKLSLRPEQRAGTDETWDRAEQGLRDALTACGLSWEE------LPGEGAFYGPKIEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+GR WQCGT+Q+D  LP R  A YV   + +  PVM+HRA+ GS+ERF+GI+IE+
Sbjct: 468 HIKDALGRSWQCGTLQLDMVLPERLGAEYVAEDNSRRRPVMLHRAIVGSMERFLGILIEH 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G +P WL+P QA+V  I  S VEYA  +   L+   + +  D RNE I+YKIREH+++
Sbjct: 528 HAGAMPAWLAPFQAVVLNIAESQVEYAHSLTQTLQKQGVRVAGDLRNEKISYKIREHTLE 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K+P +++ GDKE   +++ +R  G      + +   +  L ++
Sbjct: 588 KVPYLLVVGDKERDAQTVAVRARGGVDLGVMPIEAFVERLQED 630


>gi|114799933|ref|YP_761871.1| threonyl-tRNA synthetase [Hyphomonas neptunium ATCC 15444]
 gi|123027650|sp|Q0BXC2|SYT_HYPNA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|114740107|gb|ABI78232.1| threonyl-tRNA synthetase [Hyphomonas neptunium ATCC 15444]
          Length = 657

 Score =  711 bits (1834), Expect = 0.0,   Method: Composition-based stats.
 Identities = 321/660 (48%), Positives = 449/660 (68%), Gaps = 17/660 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            I +T PDGS + +   A+  DVAESIS+SLAKKA+A  ++G++ DL  P+  + S+ II
Sbjct: 1   MINVTLPDGSKREYAEGASPLDVAESISKSLAKKALAAKVDGQMWDLVRPLEGDASVAII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T  DP  L +IRH  AH++A+AVQ ++P+ QV IGP+I+DGFYYDF +++PFS+D+  +I
Sbjct: 61  TDRDPEGLELIRHDAAHVLAQAVQELYPDTQVTIGPVIDDGFYYDFARKEPFSTDDFDKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESI-PAKENVTLYRQGEWFD 181
           E +M+EI+  D P +++ L  ++A   F+S  E YK +I++ I P  E +T+YRQG+WFD
Sbjct: 121 EARMREIVDADYPIVREVLGKDEAIATFKSLGEEYKAQIIDDIIPPGEQITVYRQGKWFD 180

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ STG++ K FKLMK+AGAYWRGD    ML R+YGTAW  +++L  +L  LEE+
Sbjct: 181 LCRGPHLPSTGKLPKAFKLMKLAGAYWRGDHRNEMLQRMYGTAWANEKDLKDHLTRLEEA 240

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
           EKRDHRKL  ++DLFH   +  G +FWH KG+ I++ L +Y+RR+     Y E+ TPQ+L
Sbjct: 241 EKRDHRKLGAQLDLFHFQPEAQGSVFWHPKGFMIWRELEAYIRRQQDADGYVEVKTPQLL 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIK--------DLRTFALKPMNCPGHVAVFNHGL 352
           +   W++SGHW  +R NMF V     + +        +    ALKPMNCP HV +F +  
Sbjct: 301 NSVFWEKSGHWSKFRENMFVVPDEIPSTESDAPILSGEGELMALKPMNCPAHVQIFKNAQ 360

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
           +SYR+LP+R+AEFG  +RNE  G+LHGLMRVR  TQDDAH+FC ++Q+ +E L+   L  
Sbjct: 361 RSYRDLPIRMAEFGCCHRNEAHGALHGLMRVRQMTQDDAHIFCREDQIADETLRFLKLFE 420

Query: 413 SIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
           ++Y DFG  +I  KL+TRPE R G+D  WD AE  +   L          +   +  GEG
Sbjct: 421 TVYGDFGLSEISYKLATRPEMRAGTDETWDRAEKALADALTAAG------MTFSIAEGEG 474

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           AFYGPK E+ L DAIGR WQCGT Q+D+ LP R +A Y  S   K  PVM+HRAVFG+ E
Sbjct: 475 AFYGPKLEFHLTDAIGRTWQCGTFQLDYVLPERLDAEYTGSDGAKHRPVMLHRAVFGTFE 534

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
           RF+GI+IEN+ G+ PLW+SP+Q +V  IT +A +YA+E A  L+   L +E D RNETIN
Sbjct: 535 RFMGILIENYAGSFPLWMSPVQVVVAAITDAAGDYAEEAAAALRKAGLRVEVDKRNETIN 594

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           YK+REHS++K+P+I + G +EA +R + +RR GS   Q +SL +A+  L  E+  PD ++
Sbjct: 595 YKVREHSVQKVPVIAVVGAREAEDRKLALRRLGSNGQQIISLDEALVALADEARAPDLKR 654


>gi|170701132|ref|ZP_02892106.1| threonyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
 gi|170133954|gb|EDT02308.1| threonyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
          Length = 635

 Score =  711 bits (1834), Expect = 0.0,   Method: Composition-based stats.
 Identities = 313/643 (48%), Positives = 438/643 (68%), Gaps = 15/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +  PDGS++ +    T ++VA SI   LAK A+   ++G++ D S  + R+ ++ I+
Sbjct: 1   MVSIRLPDGSVRQYEHPVTVAEVAASIGPGLAKAALGGKLDGELVDTSTVIDRDAALAIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   L +IRHS AH++A AV+ ++P+ QV IGP+I++GFYYDF   +PF+ ++L +I
Sbjct: 61  TDKDADGLDIIRHSTAHLLAYAVKELYPDAQVTIGPVIDNGFYYDFSYNRPFTPEDLEKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+MQEI  +D P  ++ +S ++A   F S  E YK EI+ESIP  + + LY  G + DL
Sbjct: 121 EKRMQEIAKKDEPVTRRVVSRDEAAGYFRSIGEKYKAEIIESIPQTDEIKLYSHGGFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG++K F KLMKVAGAYWRGDS    L RIYGTAW  +++  QYL+ LEE+E
Sbjct: 181 CRGPHVPSTGKLKVF-KLMKVAGAYWRGDSKNEQLQRIYGTAWTKKEDQDQYLHMLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD 301
           KRDHRKL +++DLFH+ E+  G++FWH KGW ++Q +  YMRR++    Y EI TP ++D
Sbjct: 240 KRDHRKLGKQLDLFHMQEESPGMVFWHPKGWALWQQVEQYMRRRVNDAGYLEIKTPMIMD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW +YR NMF       T  + R +A+KPMNCPGHV VF HGL+SYR+LP+R
Sbjct: 300 RSLWEASGHWQNYRENMFT------TESEKRDYAIKPMNCPGHVQVFKHGLRSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
            AEFGS +RNE SG+LHGLMRVRGF QDDAH+FCT+EQ   E +  + L +S+YKDFGFE
Sbjct: 354 YAEFGSCHRNEASGALHGLMRVRGFVQDDAHIFCTEEQFIAESIAFNTLAMSVYKDFGFE 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            I +KLS RPE+R G+D  WD AE  ++  L     S ++      L GEGAFYGPK EY
Sbjct: 414 HIDIKLSLRPEQRAGTDETWDRAEQGLRDALTACGLSWEE------LPGEGAFYGPKIEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+GR WQCGT+Q+D  LP R  A YV   + +  PVM+HRA+ GS+ERF+GI+IE+
Sbjct: 468 HIKDALGRSWQCGTLQLDMVLPERLGAEYVAEDNSRRRPVMLHRAIVGSMERFLGILIEH 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G +P WL+P QA+V  I  S VEYA  +   L+   + +  D RNE I+YKIREH+++
Sbjct: 528 HAGAMPAWLAPFQAVVLNIAESQVEYAHSLTQTLQKQGVRVAGDLRNEKISYKIREHTLE 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K+P +++ GDKE   +++ +R  G      + +   +  L ++
Sbjct: 588 KVPYLLVVGDKERDAQTVAVRARGGVDLGVMPIEAFVERLQED 630


>gi|312113796|ref|YP_004011392.1| threonyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100]
 gi|311218925|gb|ADP70293.1| threonyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100]
          Length = 640

 Score =  711 bits (1834), Expect = 0.0,   Method: Composition-based stats.
 Identities = 355/651 (54%), Positives = 488/651 (74%), Gaps = 13/651 (1%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I LTFPDGS ++F    TG+++A SIS+SLAKKAVAV ++G++ DL+DP+  +  + I+
Sbjct: 1   MITLTFPDGSARSFDAAITGAELAASISKSLAKKAVAVVLDGQLADLADPIATDARVRIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +DP +L +IRH  AH+MAEAVQ ++P  QV IGP+IE+GFYYDF + + F+ D+LA+I
Sbjct: 61  TRDDPEALELIRHDAAHVMAEAVQELFPGTQVTIGPVIENGFYYDFYRAESFTPDDLAKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E+KM+EIIA D PF+K+  S  KA++ F ++ E +KVE++++IP  +++ +YRQG+W DL
Sbjct: 121 EEKMREIIAADKPFVKEVWSRAKAQDFFAAEGEGFKVELIDAIPEGQDLKIYRQGDWLDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ STG+V K FKLM++AG+YWRGDSNR  L RIYGTAW + ++L  YL  LEE+E
Sbjct: 181 CRGPHLPSTGKVGKAFKLMRLAGSYWRGDSNREQLQRIYGTAWASDEQLKSYLTMLEEAE 240

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHR+L REMDLFH+ E+  G +FWH KGW +FQ LI++MRR+     + E+N+P +++
Sbjct: 241 KRDHRRLGREMDLFHLQEEAPGSVFWHPKGWTVFQALIAFMRRRQHASGHVEVNSPDMME 300

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+QSGHW+ +  NMF  +  D+     R F  KPMNCPGH+ +F +GLKSYR+LP+R
Sbjct: 301 RKLWEQSGHWEKFGENMFVTETPDE-----RVFCCKPMNCPGHIQIFKNGLKSYRDLPLR 355

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AEFG V+R EPSG+LHG+MRVR FTQDDAH+FCT EQ+  EC+ +++L++SIY+DFGFE
Sbjct: 356 IAEFGKVHRYEPSGALHGIMRVRHFTQDDAHIFCTPEQITEECVHLNSLLLSIYRDFGFE 415

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            +++KLSTRPEKRVGSD +WD AE  +K  ++             +  GEGAFYGPK EY
Sbjct: 416 DVVIKLSTRPEKRVGSDEVWDKAEAALKAAVEAAGEP------YTLNPGEGAFYGPKLEY 469

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L+DAIGR+WQCGTIQ+DFNLP R  AFY+     K  PVMIHRA+FGS+ERFIGI+IEN
Sbjct: 470 TLRDAIGREWQCGTIQLDFNLPVRLGAFYIGEDGAKHTPVMIHRALFGSLERFIGILIEN 529

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G+LPLWLSP+Q +V TI S A  YA E+   L +  +  ETD RNE INYK+REHS+ 
Sbjct: 530 YAGHLPLWLSPVQTMVATIVSDADAYAGEVEAALVAAGVRAETDLRNEKINYKVREHSLA 589

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           K+P++ + G +EA ER++ +RR GS   + +SL +AI  +  E++PPD ++
Sbjct: 590 KVPVMFVVGKREAEERTVSVRRLGSQAQETLSLDEAIARIATEAVPPDLRR 640


>gi|296133381|ref|YP_003640628.1| threonyl-tRNA synthetase [Thermincola sp. JR]
 gi|296031959|gb|ADG82727.1| threonyl-tRNA synthetase [Thermincola potens JR]
          Length = 637

 Score =  711 bits (1834), Expect = 0.0,   Method: Composition-based stats.
 Identities = 300/644 (46%), Positives = 431/644 (66%), Gaps = 16/644 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
           + IK++  DGSI+ +    T +D+A  IS  LAK A+   +NGK+ D+S PV  + ++EI
Sbjct: 2   AKIKISLKDGSIREYEAGTTITDIAGDISPRLAKNALVARLNGKLVDMSRPVNEDSTLEI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +T +D     V RHS +H++A+AV+ ++PE ++ IGP I DG+YYDFD ++ F+ ++L +
Sbjct: 62  LTFDDEEGREVFRHSSSHVLAQAVKHLFPETKLGIGPAIADGYYYDFDVKENFTPEDLEK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK+M++I+ +D PF +  LS E+A +LF    E YKVE++  +P    ++ Y+QG++ D
Sbjct: 122 IEKEMEKIVQQDLPFERSELSREEALKLFNEMGEPYKVELINDLPEDAVISCYKQGDFVD 181

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LC GPHV STG++K   KLM +AGAYWRG     ML RIYGT++  +  L +YL+ LEE+
Sbjct: 182 LCAGPHVPSTGKLK-AIKLMSLAGAYWRGSEKNKMLQRIYGTSFPKKSLLDEYLFRLEEA 240

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVL 300
           +KRDHRKL  E+DLF I E+G G  F+H KG  +   L  + R + +   Y+EI TP +L
Sbjct: 241 KKRDHRKLGAELDLFSIQEEGPGFPFFHPKGMIVRNELEKFWREQHEKAGYQEIRTPIIL 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ LW+QSGHWD YR NM+  K       D   FA+KPMNCPG + V+   L SYR+ P+
Sbjct: 301 NRSLWEQSGHWDHYRENMYFTKI------DDIDFAVKPMNCPGSILVYKTRLHSYRDFPI 354

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLAE G V+R+E SG LHGLMRVR FTQDDAH+F    Q+ +E +K+ +LI + YK FGF
Sbjct: 355 RLAELGLVHRHEMSGVLHGLMRVRCFTQDDAHIFMLPSQIKDEIIKVIDLIDNFYKVFGF 414

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           +   V+LST+PEK +GSD +WD A N +K  L          ++  +  G+GAFYGPK +
Sbjct: 415 KYH-VELSTKPEKAMGSDEIWDLATNALKEALAA------KGMDFKINEGDGAFYGPKID 467

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           + L D +GR WQCGTIQ+DF +P +F+  YV    +K  PVMIHR VFGSIERFIGI+IE
Sbjct: 468 FHLMDCLGRTWQCGTIQLDFLMPEKFDLTYVGEDGQKHRPVMIHRVVFGSIERFIGILIE 527

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +F G LP+WLSP+QA + T+T  + +YA+++A+ LK   + +E D RNE I YKIRE  +
Sbjct: 528 HFAGALPVWLSPVQAKIMTVTDRSKQYAEKVADWLKEKGVRVEVDARNEKIGYKIREAQV 587

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +K+P +++ GDKE    ++ +R+ G      V+  D + ++TKE
Sbjct: 588 EKVPYMLVVGDKEMENGTVAVRKRGEGDKGAVNADDFVALITKE 631


>gi|161621305|ref|YP_583315.2| threonyl-tRNA synthetase [Cupriavidus metallidurans CH34]
          Length = 635

 Score =  711 bits (1834), Expect = 0.0,   Method: Composition-based stats.
 Identities = 325/643 (50%), Positives = 446/643 (69%), Gaps = 15/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +T PDGS + +P   T ++VA+SI   LAK A+A  ++G++ D S  + ++ S+ I+
Sbjct: 1   MIVITLPDGSRREYPGPVTVAEVAQSIGSGLAKAALAGKVDGRMVDTSFRIDQDASLSIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   + VIRHS AH++A AV+ ++P+ QV IGP+I++GFYYDF  ++PF+ ++LA I
Sbjct: 61  TDKDADGVDVIRHSTAHLLAYAVKELYPDAQVTIGPVIDNGFYYDFSYKRPFTPEDLAAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EKKM E+  +D    ++  + ++A  LFES  E YK EI+ SIPA + + LYR+G + DL
Sbjct: 121 EKKMTELARKDEKVSREVWNRDEAVALFESMGEKYKAEIIASIPADQEIGLYREGSFVDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG++K F KLMKVAGAYWRGDSN  ML RIYGTAW  +++   YL+ LEE+E
Sbjct: 181 CRGPHVPSTGKLKVF-KLMKVAGAYWRGDSNNEMLQRIYGTAWAKKEDQDAYLHMLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLD 301
           KRDHR+L + +DLFH+ E+  G++FWH KGW+++Q +  YMR R  +  YEE+ TPQV+D
Sbjct: 240 KRDHRRLGKTLDLFHLQEEAPGMVFWHPKGWQVWQAVEQYMRGRLGQAGYEEVRTPQVMD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW++SGHWD+Y+ NMF       T  + R +A+KPMNCPGHV +FNHGL+SYR+LP+R
Sbjct: 300 RSLWERSGHWDNYKENMFV------TESEKRDYAIKPMNCPGHVQIFNHGLRSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFG+ +RNEPSG+LHGLMRVRGF QDDAH+FCT+EQ+  E    + L  SIY DFGF+
Sbjct: 354 LAEFGACHRNEPSGALHGLMRVRGFVQDDAHIFCTEEQIVEEAKAFNELAFSIYDDFGFK 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + VKLS RPEKR GSDA+WD AE+ ++  L          +    L GEGAFYGPK EY
Sbjct: 414 DVAVKLSLRPEKRAGSDAVWDHAEDGLRLALRACG------VEWEELPGEGAFYGPKVEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDAIGR WQCGT+Q+D  LP R  A YV+  + +  PVM+HRA+ GS ERF+GI++EN
Sbjct: 468 HIKDAIGRSWQCGTLQLDLVLPERLGAEYVSEDNSRKRPVMLHRAILGSFERFLGILLEN 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G LP WL+P Q +V  I  S  EYA+ +  LL+      + D RNE I YKIREHS++
Sbjct: 528 HAGALPAWLAPEQVVVMNIAESQSEYAENVVQLLQKQGFRAKADLRNEKITYKIREHSLQ 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIP +++ GDKE     + +R  G+     + +   +  L ++
Sbjct: 588 KIPYLLVIGDKERDANQVAVRARGNVDLGVMPVSAFVERLQQD 630


>gi|172060451|ref|YP_001808103.1| threonyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
 gi|238689138|sp|B1YP13|SYT_BURA4 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|171992968|gb|ACB63887.1| threonyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
          Length = 635

 Score =  710 bits (1833), Expect = 0.0,   Method: Composition-based stats.
 Identities = 313/643 (48%), Positives = 437/643 (67%), Gaps = 15/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +  PDGS++ +    T ++VA SI   LAK A+   ++G++ D S  + R+ ++ II
Sbjct: 1   MVSIRLPDGSVRQYEHPVTVAEVAASIGPGLAKAALGGKLDGELVDTSTVIDRDAALAII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   L +IRHS AH++A AV+ ++P+ QV IGP+I++GFYYDF   +PF+ ++L +I
Sbjct: 61  TDKDADGLDIIRHSTAHLLAYAVKELYPDAQVTIGPVIDNGFYYDFSYNRPFTPEDLEKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+MQEI  +D P  ++ +S ++A   F S  E YK EI+ESIP  + + LY  G + DL
Sbjct: 121 EKRMQEIAKKDEPVTRRVVSRDEAAGYFRSIGEKYKAEIIESIPQTDEIKLYSHGGFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG++K F KLMKVAGAYWRGDS    L RIYGTAW  +++  QYL+ LEE+E
Sbjct: 181 CRGPHVPSTGKLKVF-KLMKVAGAYWRGDSKNEQLQRIYGTAWTKKEDQDQYLHMLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD 301
           KRDHRKL +++DLFH+ E+  G++FWH KGW ++Q +  YMRR++    Y EI TP ++D
Sbjct: 240 KRDHRKLGKQLDLFHMQEESPGMVFWHPKGWALWQQVEQYMRRRVNDAGYLEIKTPMIMD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW +YR NMF       T  + R +A+KPMNCPGHV VF HGL+SYR+LP+R
Sbjct: 300 RSLWEASGHWQNYRENMFT------TESEKRDYAIKPMNCPGHVQVFKHGLRSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
            AEFGS +RNE SG+LHGLMRVRGF QDDAH+FCT+EQ   E +  + L +S+YKDFGFE
Sbjct: 354 YAEFGSCHRNEASGALHGLMRVRGFVQDDAHIFCTEEQFIAESIAFNTLAMSVYKDFGFE 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            I +KLS RPE+R G+D  WD AE  ++  L     S ++      L GEGAFYGPK EY
Sbjct: 414 HIDIKLSLRPEQRAGTDETWDRAEQGLRDALTACGLSWEE------LPGEGAFYGPKIEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+GR WQCGT+Q+D  LP R  A YV   + +  PVM+HRA+ GS+ERF+GI+IE+
Sbjct: 468 HIKDALGRSWQCGTLQLDMVLPERLGAEYVAEDNSRRRPVMLHRAIVGSMERFLGILIEH 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G +P WL+P QA+V  I  S  EYA  +   L+   + +  D RNE I+YKIREH+++
Sbjct: 528 HAGAMPAWLAPFQAVVLNIAESQAEYAHSLTQTLQKQGVRVAGDLRNEKISYKIREHTLE 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K+P +++ GDKE   +++ +R  G      + +   +  L ++
Sbjct: 588 KVPYLLVVGDKERDAQTVAVRARGGVDLGVMPIEAFVERLQED 630


>gi|217979642|ref|YP_002363789.1| threonyl-tRNA synthetase [Methylocella silvestris BL2]
 gi|217505018|gb|ACK52427.1| threonyl-tRNA synthetase [Methylocella silvestris BL2]
          Length = 648

 Score =  710 bits (1833), Expect = 0.0,   Method: Composition-based stats.
 Identities = 377/651 (57%), Positives = 500/651 (76%), Gaps = 10/651 (1%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEII 62
            I +TFPDG+ + FP  A+G D+A++IS SLAK+ VA+ ++G + DL+DPVR G+ +E I
Sbjct: 1   MIDVTFPDGATRQFPAGASGFDIAKAISPSLAKRTVAMIVDGSLSDLADPVRHGARVEFI 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
             ED R+L +IRH  AH++AEAVQ+++P  QV IGP+IE+GFYYDF + +PF+ D+ A +
Sbjct: 61  GREDKRALELIRHDAAHVLAEAVQTLYPGTQVTIGPVIENGFYYDFFRNEPFTPDDFAAV 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EKKM EIIARD PF K+  S ++AR  FE++ EA+KVE+++SIP  E++ +YRQG+W DL
Sbjct: 121 EKKMAEIIARDRPFTKEVWSRDQARSFFETRGEAFKVELVDSIPGDEDLKIYRQGDWLDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ STG++   FKLMKVAGAYWRGDSNRPML RIY TA+ T++EL  YL  +EE+E
Sbjct: 181 CRGPHMTSTGKIGDAFKLMKVAGAYWRGDSNRPMLQRIYATAFATREELAAYLRQIEEAE 240

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHR+L REMDLFH  E+G G IFWH KGW +FQTLI+YMRR+++   Y E+NTPQVLD
Sbjct: 241 KRDHRRLGREMDLFHFQEEGPGAIFWHPKGWTLFQTLIAYMRRRMEADGYLEVNTPQVLD 300

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW ++R +MF  K      +D R FALKPMNCPGHV +F +GLKSYR+LP++
Sbjct: 301 RALWETSGHWQTFREHMFLTK-----TEDERIFALKPMNCPGHVQIFKNGLKSYRDLPLK 355

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           + EFG V+R EPSG+LHG+MRVR FTQDDAH+FCT++Q+  E LK+++LI+SIY+DFGF+
Sbjct: 356 IGEFGVVHRYEPSGALHGVMRVRAFTQDDAHIFCTEDQIMAESLKVNDLILSIYQDFGFD 415

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            +++KLSTRPEKRVGS+  WD AE  +  V+D +         TGV  GEGAFYGPK EY
Sbjct: 416 DVIIKLSTRPEKRVGSEEAWDKAEAALGRVVDMLAAGGAK---TGVNPGEGAFYGPKLEY 472

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L+DAIGR+WQCGT QVDFN+P RF AFY+++ S+K  PVMIHRA+FGS+ERF GI+IE+
Sbjct: 473 TLRDAIGREWQCGTTQVDFNMPGRFGAFYIDADSDKKTPVMIHRAIFGSLERFTGILIEH 532

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           F GNLPLWL+P+Q IV TIT  A +YA E+A   + + L +E D RNE I+YKIREHS+ 
Sbjct: 533 FSGNLPLWLAPVQVIVATITQDADDYALEVAAAARKYGLRVEADLRNEKISYKIREHSLA 592

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           K P++I+ G +E  ER++ IRR G++ T  +SL  A+  L  E+ PPD ++
Sbjct: 593 KTPVLIVVGKREGLERTVSIRRLGASDTTSLSLETALERLADEATPPDLRR 643


>gi|307730402|ref|YP_003907626.1| threonyl-tRNA synthetase [Burkholderia sp. CCGE1003]
 gi|307584937|gb|ADN58335.1| threonyl-tRNA synthetase [Burkholderia sp. CCGE1003]
          Length = 635

 Score =  710 bits (1832), Expect = 0.0,   Method: Composition-based stats.
 Identities = 306/643 (47%), Positives = 441/643 (68%), Gaps = 15/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +  PDGS++ +    T ++VA SI   LAK A+   I+G++ D S  +  + ++ I+
Sbjct: 1   MVSIRLPDGSVRQYEHPVTVAEVAASIGPGLAKAALGGKIDGQLVDTSTLIDHDVALAIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   L +IRHS AH++A AV+ ++PE QV IGP+I++GFYYDF   +PF+ ++L +I
Sbjct: 61  TEKDADGLDIIRHSTAHLLAYAVKDLYPEAQVTIGPVIDNGFYYDFAYSRPFTPEDLEKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+MQE+  +D P  ++ +S ++A + F+S  E YK EI++SIPA + + LY  G + DL
Sbjct: 121 EKRMQELAKKDEPVSRRVVSRDEAVDYFKSIGEKYKAEIIQSIPATDEIKLYSHGGFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG++K F KLMKVAGAYWRGDS    L RIYGTAW  +++   YL+ LEE+E
Sbjct: 181 CRGPHVPSTGKLKVF-KLMKVAGAYWRGDSKNEQLQRIYGTAWTKKEDQEAYLHMLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL +++DLFH+ ++  G++FWH +GW ++Q +  YMRR++ +  Y EI TP ++D
Sbjct: 240 KRDHRKLGKQLDLFHMQDESPGMVFWHPRGWTLWQQVEQYMRRRVNEAGYLEIKTPMIMD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW +YR NMF       T  + R +A+KPMNCPGHV VFNHGL+SYR+LP+R
Sbjct: 300 RSLWEASGHWQNYRENMFT------TESEKRDYAIKPMNCPGHVQVFNHGLRSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
            AEFGS +RNE SG+LHGLMRVRGF QDDAH+FCT+EQ  +E +  + L +S+YKDFGF+
Sbjct: 354 YAEFGSCHRNESSGALHGLMRVRGFVQDDAHIFCTEEQFISESIAFNTLAMSVYKDFGFD 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + +KLS RP+ R G+D  WD AE  ++  L          +    L GEGAFYGPK EY
Sbjct: 414 NVEIKLSLRPDARAGTDETWDRAEQGLREALTACG------VTWEELPGEGAFYGPKVEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+GR WQCGT+Q+D  LP R  A YV   + +  P+M+HRA+ GS+ERF+GI+IE+
Sbjct: 468 HIKDALGRSWQCGTLQLDMVLPERLGAEYVAEDNGRRRPIMLHRAIVGSMERFLGILIEH 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G +P WL+P+Q +V  I  +  EYAQ +A  L+   + +E D RNE I+YKIR+H+++
Sbjct: 528 HAGAMPAWLAPMQVVVMNIAENQAEYAQSLAQSLQKQGVRVEADLRNEKISYKIRQHTLE 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K+P +++ GDKE   +++ +R  G      + +   I  L ++
Sbjct: 588 KVPYLLVVGDKEREAQTVAVRARGGVDLGVMPVGAFIERLRQD 630


>gi|330816669|ref|YP_004360374.1| Threonyl-tRNA synthetase [Burkholderia gladioli BSR3]
 gi|327369062|gb|AEA60418.1| Threonyl-tRNA synthetase [Burkholderia gladioli BSR3]
          Length = 635

 Score =  710 bits (1831), Expect = 0.0,   Method: Composition-based stats.
 Identities = 310/643 (48%), Positives = 442/643 (68%), Gaps = 15/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +  PDGS++ +    T ++VA SI   LAK A+   ++G++ D S  + R+ S+ I+
Sbjct: 1   MVSIRLPDGSVRQYEHPVTVAEVAASIGPGLAKAALGGKLDGELVDTSALIDRDASLAIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   L +IRHS AH++A AV+ ++PE QV IGP+I++GFYYDF   +PF+ ++L +I
Sbjct: 61  TDKDADGLEIIRHSTAHLLAYAVKELFPEAQVTIGPVIDNGFYYDFSYSRPFTPEDLEKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+MQE+  +D P  ++ +S E+A E F    E YK EI+ESIP+ + + LY  G + DL
Sbjct: 121 EKRMQELAKKDEPVSRRVVSREEAAEYFRGIGEKYKAEIIESIPSSDEIKLYSHGGFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG++K F KLMKVAGAYWRGDS    L RIYGTAW  +++   YL+ LEE+E
Sbjct: 181 CRGPHVPSTGKLKVF-KLMKVAGAYWRGDSKNEQLQRIYGTAWAKKEDQEAYLHMLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKLA+++DLFH+ E+  G++FWH KGW ++Q +  YMRR++ +  Y EI TP ++D
Sbjct: 240 KRDHRKLAKQLDLFHMQEESPGMVFWHPKGWTLWQQVEQYMRRRVNEAGYLEIKTPMIMD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW +YR NMF       T  + R +A+KPMNCPGHV VFNHGL+SYR+LP+R
Sbjct: 300 RSLWEASGHWQNYRENMFT------TESEKRDYAIKPMNCPGHVQVFNHGLRSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
            AEFGS +RNE SG+LHGLMRVRGF QDDAH+FCT++Q  +E +  + L +S+YKDFGF+
Sbjct: 354 YAEFGSCHRNEASGALHGLMRVRGFVQDDAHIFCTEDQFISESIAFNELAMSVYKDFGFD 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
           +I +KLS RP++R G+D  WD AE  ++  L          +    L GEGAFYGPK EY
Sbjct: 414 QISIKLSLRPDQRAGTDETWDRAEQGLRDALTACG------LEWEELPGEGAFYGPKIEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+GR WQCGT+Q+D  LP R  A YV   + +  PVM+HRA+ GS+ERF+GI+IE+
Sbjct: 468 HIKDALGRSWQCGTLQLDMVLPERLGAEYVAEDNSRRRPVMLHRAIVGSMERFLGILIEH 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G +P WL+P+Q +V  I  +  EY + ++  L+   L +E D RNE I+YKIREH+++
Sbjct: 528 HAGAMPSWLAPVQVVVMNIAENQAEYVRSLSQSLQKQGLRVEADLRNEKISYKIREHTLE 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K+P +++ GDKE   +++ +R  G      + +   +  L ++
Sbjct: 588 KVPYLLVAGDKEREAQTVAVRARGGVDLGVMPVEAFVERLQQD 630


>gi|186476316|ref|YP_001857786.1| threonyl-tRNA synthetase [Burkholderia phymatum STM815]
 gi|238691316|sp|B2JJJ7|SYT_BURP8 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|184192775|gb|ACC70740.1| threonyl-tRNA synthetase [Burkholderia phymatum STM815]
          Length = 635

 Score =  709 bits (1829), Expect = 0.0,   Method: Composition-based stats.
 Identities = 306/643 (47%), Positives = 442/643 (68%), Gaps = 15/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +  PDGS++ +    T ++VA SI   LAK A+   I+G++ D S  +  + ++ I+
Sbjct: 1   MVSIRLPDGSVRQYEHPVTVAEVAASIGPGLAKAALGGKIDGELVDTSALIDHDVALAIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   L +IRHS AH++A AV+ ++PE QV IGP+I++GFYYDF   +PF+ ++L +I
Sbjct: 61  TDKDADGLDIIRHSTAHLLAYAVKDLFPEAQVTIGPVIDNGFYYDFSYSRPFTPEDLEKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+MQE+  +D P  ++ +S ++A + F+S  E YK EI+ESIPA +++ LY  G + DL
Sbjct: 121 EKRMQELAKKDEPVSRRVVSRDEAADYFKSIGEKYKAEIIESIPASDDIKLYSHGGFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG++K F KLMKVAGAYWRGDS    L RIYGTAW  +++   YL+ LEE+E
Sbjct: 181 CRGPHVPSTGKLKVF-KLMKVAGAYWRGDSKNEQLQRIYGTAWTKKEDQDAYLHMLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL +++DLFH+ ++  G++FWH +GW ++Q +  YMRR++ +  Y EI TP ++D
Sbjct: 240 KRDHRKLGKQLDLFHMQDESPGMVFWHPRGWTLWQQVEQYMRRRVNEAGYLEIKTPMIMD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW +YR NMF       T  + R +A+KPMNCPGHV VFNHGL+SYR+LP+R
Sbjct: 300 RSLWEASGHWQNYRDNMFT------TESEKRDYAIKPMNCPGHVQVFNHGLRSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
            AEFGS +RNE SG+LHGLMRVRGF QDDAH+FCT++Q  +E +  + L +S+YKDFGF+
Sbjct: 354 YAEFGSCHRNESSGALHGLMRVRGFVQDDAHIFCTEDQFISESIAFNTLAMSVYKDFGFD 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + +KLS RP+ R G+D +WD AE  ++  L          +    L GEGAFYGPK EY
Sbjct: 414 NVEIKLSLRPDARAGTDEIWDRAEQGLRDALTACG------VTWEELPGEGAFYGPKVEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+GR WQCGT+Q+D  LP R  A +V   + +  P+M+HRA+ GS+ERF+GI+IE+
Sbjct: 468 HIKDALGRSWQCGTLQLDMVLPERLGAEFVAEDNSRRRPIMLHRAIVGSMERFLGILIEH 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G +P WL+P+Q +V  I  S  EYAQ +A  L+   + +E D RNE I+YKIREH+++
Sbjct: 528 HAGAMPAWLAPMQVVVMNIAESQAEYAQSLAQSLQKQGVRVEADLRNEKISYKIREHTLE 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K+P +++ GDKE   +++ +R  G      + +      L ++
Sbjct: 588 KVPYLLVVGDKERDAQTVAVRARGGIDLGVMPVDAFSERLRQD 630


>gi|170695920|ref|ZP_02887060.1| threonyl-tRNA synthetase [Burkholderia graminis C4D1M]
 gi|170139218|gb|EDT07406.1| threonyl-tRNA synthetase [Burkholderia graminis C4D1M]
          Length = 635

 Score =  708 bits (1828), Expect = 0.0,   Method: Composition-based stats.
 Identities = 309/641 (48%), Positives = 435/641 (67%), Gaps = 15/641 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +  PDGS++ +    T ++VA SI   LAK A+   I+G++ D S  +  + S+ II
Sbjct: 1   MVSIRLPDGSVRQYEHPVTVAEVAASIGPGLAKAALGGKIDGELVDTSTLIDHDVSLAII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   L +IRHS AH++A AV+ ++PE QV IGP+I++GFYYDF   +PF+ ++L +I
Sbjct: 61  TEKDADGLDIIRHSTAHLLAYAVKDLYPEAQVTIGPVIDNGFYYDFAYSRPFTPEDLEKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+MQE+  +D P  ++ +S  +A + F+S  E YK EI+ESIPA + + LY  G + DL
Sbjct: 121 EKRMQELAKKDEPVSRRVVSRGEAVDYFKSIGEKYKAEIIESIPATDEIKLYSHGGFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG++K F KLMKVAGAYWRGDS    L RIYGTAW  +++   YL+ LEE+E
Sbjct: 181 CRGPHVPSTGKLKVF-KLMKVAGAYWRGDSKNEQLQRIYGTAWTKKEDQEAYLHMLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD 301
           KRDHRKL +++DLFH+ ++  G++FWH +GW ++Q +  YMRR++    Y EI TP ++D
Sbjct: 240 KRDHRKLGKQLDLFHMQDESPGMVFWHPRGWTLWQQVEQYMRRRVNDAGYLEIKTPMIMD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW +YR NMF       T  + R +A+KPMNCPGHV VFNHGL+SYR+LP+R
Sbjct: 300 RSLWEASGHWQNYRENMFT------TESEKRDYAIKPMNCPGHVQVFNHGLRSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
            AEFGS +RNE SG+LHGLMRVRGF QDDAH+FCT++Q  +E +  + L +S+Y DFGF+
Sbjct: 354 YAEFGSCHRNESSGALHGLMRVRGFVQDDAHIFCTEDQFISESIAFNTLAMSVYSDFGFD 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + +KLS RP+ R G+D  WD AE  ++  L          +    L GEGAFYGPK EY
Sbjct: 414 HVEIKLSLRPDARAGTDETWDRAEQGLREALTACG------VTWEELPGEGAFYGPKVEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+GR WQCGT+Q+D  LP R  A YV   + +  P+M+HRA+ GS+ERF+GI+IE+
Sbjct: 468 HIKDALGRSWQCGTLQLDMVLPERLGAEYVAEDNSRRRPIMLHRAIVGSMERFLGILIEH 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G +P WL+P+Q +V  I  S  EYAQ +A  L+   + +E D RNE I+YKIREH+++
Sbjct: 528 HAGAMPAWLAPMQVVVMNIAESQAEYAQSLAQSLQKQGVRVEADLRNEKISYKIREHTLE 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           K+P +++ GDKE   +++ +R  G      +     I  L 
Sbjct: 588 KVPYLLVVGDKEREAQTVAVRARGGVDLGVMPADTFIERLR 628


>gi|288959315|ref|YP_003449656.1| threonyl-tRNA synthetase [Azospirillum sp. B510]
 gi|288911623|dbj|BAI73112.1| threonyl-tRNA synthetase [Azospirillum sp. B510]
          Length = 650

 Score =  708 bits (1828), Expect = 0.0,   Method: Composition-based stats.
 Identities = 328/650 (50%), Positives = 454/650 (69%), Gaps = 12/650 (1%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           M S+I +T PDGS++ F    TG ++A+SI   LAK A+AV I+G V DL+  V     I
Sbjct: 1   MTSNIAITLPDGSVREFDRPVTGLEIAQSIGSRLAKDALAVKIDGTVKDLTTTVTTNARI 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EI+T     +L VIRH  AH++A+AVQ ++P  QV IGP I  GFYYDF +++PF+ ++L
Sbjct: 61  EIVTRNHGDALEVIRHDAAHVLADAVQKLYPGTQVTIGPSIATGFYYDFARDEPFTPEDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IE KM+E++A D P L++    ++A   F+   E YK E++E+IP  E V++YRQG+W
Sbjct: 121 EKIEAKMRELVAADIPILREVWDRDEAIAYFKKLGEHYKAELIETIPQGEPVSVYRQGDW 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPH  +TG+V + FKLMKVAGAYWRGDS  PML RIYGTAW  ++EL  YL+ +E
Sbjct: 181 LDLCRGPHAMTTGKVGQGFKLMKVAGAYWRGDSRNPMLQRIYGTAWRDEKELKAYLHQIE 240

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+EKRDHRKL +E+DLFH+ E+  G +FWH KGW +++TL +Y+R K+K  DY E+ TPQ
Sbjct: 241 EAEKRDHRKLGKELDLFHVQEEAVGSVFWHPKGWTLYRTLETYIRTKLKAADYVEVKTPQ 300

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D  L++ SGHWD Y  NMF V+         +   +KPMNCPGHV +F +GL+SYR+L
Sbjct: 301 LIDSSLFKASGHWDMYGDNMFKVEADGGE----KLLGIKPMNCPGHVQIFRNGLRSYRDL 356

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG+ +RNEPSG+LHG+MRVR FTQDDAH+FCT++Q+ +E  +   L + +YKD 
Sbjct: 357 PIRMAEFGACHRNEPSGALHGIMRVRAFTQDDAHIFCTEDQVQSEAAEYFKLQLGVYKDL 416

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF++I VKL+ RP+ R G+D LWD AE  +   L          +    L GEGAFYGPK
Sbjct: 417 GFDQISVKLALRPDVRTGADELWDRAEGALAQALRDAG------LEYEELPGEGAFYGPK 470

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ L DAIGR WQCGT+Q D NLP R +A Y+     +  P+M+HRA+ GS+ERFIG++
Sbjct: 471 VEFHLTDAIGRTWQCGTLQYDPNLPERLDASYIGEDGARHRPIMLHRAILGSMERFIGML 530

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE++ G  PLWLSP+Q  V TITS A +YA E+A LLK   L +E D RNE IN K+REH
Sbjct: 531 IEHYAGKFPLWLSPVQVTVATITSEADDYAVEVAKLLKRKGLRVELDTRNEKINLKVREH 590

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
           S++K+P++++ G +EA ER++ +R  G    + ++L DA+  L +++  P
Sbjct: 591 SLQKVPLMLVVGKREAEERTVALRVLGGKDQEILALDDAVAKLIEDAKSP 640


>gi|83719712|ref|YP_443111.1| threonyl-tRNA synthetase [Burkholderia thailandensis E264]
 gi|167620276|ref|ZP_02388907.1| threonyl-tRNA synthetase [Burkholderia thailandensis Bt4]
 gi|123767616|sp|Q2SVD8|SYT_BURTA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|83653537|gb|ABC37600.1| threonyl-tRNA synthetase [Burkholderia thailandensis E264]
          Length = 635

 Score =  708 bits (1828), Expect = 0.0,   Method: Composition-based stats.
 Identities = 313/643 (48%), Positives = 437/643 (67%), Gaps = 15/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +  PDGSI+ +    T ++VA SI   LAK A+   ++G++ D S  + R+ S+ I+
Sbjct: 1   MVSIRLPDGSIRQYEHPVTVAEVAASIGPGLAKAALGGKLDGELVDTSALIDRDASLAIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   L +IRHS AH++A AV+ + P+ QV IGP+I++GFYYDF   +PF+ ++L  I
Sbjct: 61  TDKDADGLDIIRHSTAHLLAYAVKELHPDAQVTIGPVIDNGFYYDFSYHRPFTPEDLEAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+MQE+  RD P  ++ +S ++A   F S  E YK EI+ESIPA + + LY  G + DL
Sbjct: 121 EKRMQELAKRDEPVTRRVVSRDEAVSYFRSIGEKYKAEIIESIPASDEIKLYSHGGFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG++K F KLMKVAGAYWRGDS    L RIYGTAW  +++   YL+ LEE+E
Sbjct: 181 CRGPHVPSTGKLKVF-KLMKVAGAYWRGDSKNEQLQRIYGTAWTKKEDQDAYLHMLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL +++DLFHI E+  G++FWH KGW ++Q +  YMRR++    Y EI TP ++D
Sbjct: 240 KRDHRKLGKQLDLFHIQEEAPGMVFWHPKGWTLWQRVEQYMRRRLDAAGYLEIKTPMIMD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW +YR NMF       T  + R +A+KPMNCPGHV VF HGL+SYR+LP+R
Sbjct: 300 RSLWEASGHWQNYRENMFT------TESEKRDYAIKPMNCPGHVQVFKHGLRSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
            AEFGS +RNE SG+LHGLMRVRGF QDDAH+FCT++Q+ +E +  + L +S+Y+DFGF+
Sbjct: 354 YAEFGSCHRNEASGALHGLMRVRGFVQDDAHIFCTEDQINSEAIAFNKLAMSVYEDFGFD 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
           +I +KLS RPE+R+GSD  WD AE  ++  L          +    L GEGAFYGPK EY
Sbjct: 414 RIDIKLSLRPEQRMGSDETWDHAEEGLRNALKACG------LEWEELPGEGAFYGPKIEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+GR WQCGT+Q+D  LP R  A YV   + +  PVM+HRA+ GS+ERF+GI+IE+
Sbjct: 468 HIKDALGRSWQCGTLQLDMMLPERLGAEYVAEDNSRRRPVMLHRAIVGSMERFLGILIEH 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G +P WL+P  A+V  I  S  EYAQ +   L+   L +  D RNE I+YKIREH+++
Sbjct: 528 HAGAMPAWLAPFHAVVLNIAESQAEYAQTVVQSLQKQGLRVSADLRNEKISYKIREHTLE 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K+P +++ GDKE   +++ +R  G      + +   +  L ++
Sbjct: 588 KVPYLLVVGDKEREAQTVAVRARGGVDLGVMPVEAFVERLRED 630


>gi|325197939|gb|ADY93395.1| threonyl-tRNA synthetase [Neisseria meningitidis G2136]
          Length = 637

 Score =  708 bits (1828), Expect = 0.0,   Method: Composition-based stats.
 Identities = 307/645 (47%), Positives = 445/645 (68%), Gaps = 16/645 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +T PDGS++ +    T + +A SI   LAK AVA  +NGK+ D  DP+  + +++II
Sbjct: 1   MLNITLPDGSVRQYESPVTVAQIAASIGAGLAKAAVAGRVNGKLVDACDPIVEDSAVQII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TP+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A I
Sbjct: 61  TPKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M+E+IA+D   +K      +A ++F+ + E YK+ +++ +P  E + +Y   E+ D+
Sbjct: 121 EARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLIDDMPEVEAMGMYHHQEYVDM 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+E
Sbjct: 181 CRGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKAYIQRIEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL +++DLFH+ ++  G++FWH KGW ++Q +  +MR+++    Y+E+ TPQ++D
Sbjct: 240 KRDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           +  W++SGHWD+Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+R
Sbjct: 300 KTFWEKSGHWDNYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF 
Sbjct: 354 LAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFH 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + VKLS RPEKR GSD +WD AE  ++  L          +  G L GEGAFYGPK EY
Sbjct: 414 DVSVKLSLRPEKRAGSDDVWDKAEQGLREALTACG------VEWGELPGEGAFYGPKIEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+GR WQCGT+Q+DF LP R +A YV  ++++  PVM+HRA+ GS+ERFIGI+IEN
Sbjct: 468 HVKDALGRSWQCGTLQLDFVLPERLDAEYVTENNDRARPVMLHRAILGSLERFIGILIEN 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G+ PLWL+P+Q ++  IT +  +Y +E+A  L++    +E D RNE I YKIR++S  
Sbjct: 528 HAGSFPLWLAPVQLVIMNITENQADYCREVAAKLQAAGFRVELDLRNEKIGYKIRDNSQY 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           + P  I+ GDKE  E  + +R   +     + L D I  L +E  
Sbjct: 588 RFPYQIVVGDKEKQENKVAVR-RKAEDLGSLDLDDFIAQLQQEIT 631


>gi|238027731|ref|YP_002911962.1| threonyl-tRNA synthetase [Burkholderia glumae BGR1]
 gi|237876925|gb|ACR29258.1| Threonyl-tRNA synthetase [Burkholderia glumae BGR1]
          Length = 635

 Score =  708 bits (1828), Expect = 0.0,   Method: Composition-based stats.
 Identities = 311/643 (48%), Positives = 443/643 (68%), Gaps = 15/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +  PDGS++ +    T ++VA SI   LAK A+   ++G++ D S  +  + S+ I+
Sbjct: 1   MVSIRLPDGSVRQYEHPVTVAEVAASIGPGLAKAALGGKLDGELVDTSALIDHDASLAIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   L +IRHS AH++A AV+ ++PE QV IGP+I++GFYYDF   +PF+ ++LA+I
Sbjct: 61  TDKDADGLDIIRHSAAHLLAYAVKDLYPEAQVTIGPVIDNGFYYDFSYSRPFTPEDLAKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+MQE+  +D P  ++ +S  +A + F    E YK EI+ESIP+ + + LY  G + DL
Sbjct: 121 EKRMQELAKKDEPVSRRVVSRAEAVDYFRGIGEKYKAEIIESIPSSDEIKLYSHGGFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG++K F KLMKVAGAYWRGDS    L RIYGTAW  +++   YL+ LEE+E
Sbjct: 181 CRGPHVPSTGKLKVF-KLMKVAGAYWRGDSKNEQLQRIYGTAWTRKEDQDAYLHMLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKLA+++DLFH+ E+  G++FWH KGW ++Q +  YMRR++ +  Y EI TP ++D
Sbjct: 240 KRDHRKLAKQLDLFHMQEESPGMVFWHPKGWALWQQVEQYMRRRVNEAGYLEIKTPMIMD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW +YR NMF       T  + R +A+KPMNCPGHV VFNHGL+SYR+LP+R
Sbjct: 300 RSLWEASGHWQNYRENMFT------TESEKRDYAIKPMNCPGHVQVFNHGLRSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
            AEFGS +RNE SG+LHGLMRVRGF QDDAH+FCT++Q   E +  + L +S+YKDFGF+
Sbjct: 354 YAEFGSCHRNEASGALHGLMRVRGFVQDDAHIFCTEDQFIAESIAFNELAMSVYKDFGFD 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
           +I +KLS RP++R G+D  WD AE  ++  L     + ++      L GEGAFYGPK EY
Sbjct: 414 QISIKLSLRPDQRAGTDETWDRAEQGLRDALTACGLAWEE------LPGEGAFYGPKIEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+GR WQCGT+Q+D  LP R  A YV   + +  PVM+HRA+ GS+ERF+GI+IE+
Sbjct: 468 HIKDALGRSWQCGTLQLDMVLPERLGAEYVAEDNGRRRPVMLHRAIVGSMERFLGILIEH 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G +P WL+P+QAIV  I  +  +YA  +A  L+   L +E D RNE I+YKIREH+++
Sbjct: 528 HAGAMPAWLAPVQAIVMNIAENQADYAGSLAQSLQKQGLRVEADLRNEKISYKIREHALE 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K+P +++ GDKE   +++ +R  G      + +   +  L ++
Sbjct: 588 KVPYLLVVGDKEREAQTVAVRARGGVELGVMPVEAFVEHLQQD 630


>gi|167582118|ref|ZP_02374992.1| threonyl-tRNA synthetase [Burkholderia thailandensis TXDOH]
          Length = 635

 Score =  708 bits (1827), Expect = 0.0,   Method: Composition-based stats.
 Identities = 313/643 (48%), Positives = 438/643 (68%), Gaps = 15/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +  PDGSI+ +    T ++VA SI   LAK A+   ++G++ D S  + R+ S+ I+
Sbjct: 1   MVSIRLPDGSIRQYEHPVTVAEVAASIGPGLAKAALGGKLDGELVDTSALIDRDASLAIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   L +IRHS AH++A AV+ + P+ QV IGP+I++GFYYDF   +PF+ ++L  I
Sbjct: 61  TDKDADGLDIIRHSTAHLLAYAVKELHPDAQVTIGPVIDNGFYYDFSYHRPFTPEDLEAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+MQE+  RD P  ++ +S ++A   F S  E YK EI+ESIPA + + LY  G + DL
Sbjct: 121 EKRMQELAKRDEPVTRRVVSRDEAVSYFRSIGEKYKAEIIESIPASDEIKLYSHGGFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG++K F KLMKVAGAYWRGDS    L RIYGTAW  +++   YL+ LEE+E
Sbjct: 181 CRGPHVPSTGKLKVF-KLMKVAGAYWRGDSKNEQLQRIYGTAWTKKEDQDAYLHMLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL +++DLFHI E+  G++FWH KGW ++Q +  YMRR++    Y EI TP ++D
Sbjct: 240 KRDHRKLGKQLDLFHIQEEAPGMVFWHPKGWTLWQQVEQYMRRRLDAAGYLEIKTPMIMD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW +YR NMF       T  + R +A+KPMNCPGHV VF HGL+SYR+LP+R
Sbjct: 300 RSLWEASGHWQNYRENMFT------TESEKRDYAIKPMNCPGHVQVFKHGLRSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
            AEFGS +RNE SG+LHGLMRVRGF QDDAH+FCT++Q+ +E +  + L +S+Y+DFGF+
Sbjct: 354 YAEFGSCHRNEASGALHGLMRVRGFVQDDAHIFCTEDQINSEAIAFNKLAMSVYEDFGFD 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
           +I +KLS RPE+R+GSD  WD AE  ++  L          +    L GEGAFYGPK EY
Sbjct: 414 RIDIKLSLRPEQRMGSDETWDHAEEGLRNALKACG------LEWEELPGEGAFYGPKIEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+GR WQCGT+Q+D  LP R  A YV   + +  PVM+HRA+ GS+ERF+GI+IE+
Sbjct: 468 HIKDALGRSWQCGTLQLDMMLPERLGAEYVAEDNSRRRPVMLHRAIVGSMERFLGILIEH 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G +P+WL+P  A+V  I  S  EYAQ +   L+   L +  D RNE I+YKIREH+++
Sbjct: 528 HAGAMPVWLAPFHAVVLNIAESQAEYAQTVVQSLQKQGLRVSADLRNEKISYKIREHTLE 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K+P +++ GDKE   +++ +R  G      + +   +  L ++
Sbjct: 588 KVPYLLVVGDKEREAQTVAVRARGGIDLGVMPVEAFVERLRED 630


>gi|225025724|ref|ZP_03714916.1| hypothetical protein EIKCOROL_02627 [Eikenella corrodens ATCC
           23834]
 gi|224941505|gb|EEG22714.1| hypothetical protein EIKCOROL_02627 [Eikenella corrodens ATCC
           23834]
          Length = 635

 Score =  708 bits (1827), Expect = 0.0,   Method: Composition-based stats.
 Identities = 303/644 (47%), Positives = 432/644 (67%), Gaps = 16/644 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
           S I +T PDGS++ +    T + +A SI   LAK  VA  +NG + D  DP+  + +++I
Sbjct: 2   SQINITLPDGSVRQYEAPVTVAQIAASIGSGLAKATVAGKVNGVLRDACDPITEDAAVQI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           ITP+DP  + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A 
Sbjct: 62  ITPKDPEGVEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAA 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE +M+E+I +D   +K      +  ++F+ + E YK+ ++E +P  E + +Y   E+ D
Sbjct: 122 IEARMKELINQDYDVVKIMTPRAETIKIFQERGEEYKLRLIEDMPEVEAMGMYHHQEYVD 181

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           +CRGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW ++ EL  Y+  +EE+
Sbjct: 182 MCRGPHVPNTRFLKHF-KLTKLAGAYWRGDSNNEMLQRIYGTAWASKDELKAYITRIEEA 240

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
           EKRDHR+L +++DLFH+ ++  G++FWH +GW ++QT+  +MRR++    Y E+ TPQ+L
Sbjct: 241 EKRDHRRLGKQLDLFHLQDEAPGMVFWHPRGWTLWQTIEQHMRRELDAAGYREVKTPQIL 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D+  W++SGHW +Y+ NMF       T  + R +A+KPMNCPGHV +FNHGL+SYR+LP+
Sbjct: 301 DKTFWEKSGHWANYKDNMFT------TSSEKRDYAVKPMNCPGHVQIFNHGLRSYRDLPM 354

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLAEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+  E    + L++ IYK FGF
Sbjct: 355 RLAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIAEETRAFNQLVMKIYKQFGF 414

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           E + +KLS RPE+R G+D  WD AE  ++  L          +    L GEGAFYGPK E
Sbjct: 415 EHVSIKLSLRPEQRAGTDETWDKAEQGLRDALTACG------VQWEELPGEGAFYGPKVE 468

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           Y +KDA+GR WQCGTIQ+DF LP R  A YV   + +  PVM+HRA+ GS+ERFIGI+IE
Sbjct: 469 YHIKDALGRSWQCGTIQLDFVLPERLGAEYVTEDNGRARPVMLHRAILGSLERFIGILIE 528

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              G+ PLWL+P+Q +V  IT    +Y  E+ N LK+  L  E D RNE I YKIR++S 
Sbjct: 529 EHAGSFPLWLAPVQMVVMNITEKQADYCLEVVNKLKAAGLRAEADLRNEKIGYKIRDNSQ 588

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            + P  ++ GDKE     + +R         + + + I  L +E
Sbjct: 589 MRYPYQVVVGDKEMENGQVAVR-RKGEDLGSMQIEEFIARLQQE 631


>gi|53719558|ref|YP_108544.1| threonyl-tRNA synthetase [Burkholderia pseudomallei K96243]
 gi|53725296|ref|YP_102787.1| threonyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
 gi|76810857|ref|YP_333290.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
 gi|121600801|ref|YP_992866.1| threonyl-tRNA synthetase [Burkholderia mallei SAVP1]
 gi|124385818|ref|YP_001026205.1| threonyl-tRNA synthetase [Burkholderia mallei NCTC 10229]
 gi|126441516|ref|YP_001058752.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 668]
 gi|126449349|ref|YP_001080524.1| threonyl-tRNA synthetase [Burkholderia mallei NCTC 10247]
 gi|126453502|ref|YP_001066005.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|134282197|ref|ZP_01768902.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 305]
 gi|167003090|ref|ZP_02268880.1| threonine--tRNA ligase [Burkholderia mallei PRL-20]
 gi|167719848|ref|ZP_02403084.1| threonyl-tRNA synthetase [Burkholderia pseudomallei DM98]
 gi|167738851|ref|ZP_02411625.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 14]
 gi|167816071|ref|ZP_02447751.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 91]
 gi|167824445|ref|ZP_02455916.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 9]
 gi|167845979|ref|ZP_02471487.1| threonyl-tRNA synthetase [Burkholderia pseudomallei B7210]
 gi|167894556|ref|ZP_02481958.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 7894]
 gi|167902959|ref|ZP_02490164.1| threonyl-tRNA synthetase [Burkholderia pseudomallei NCTC 13177]
 gi|167911196|ref|ZP_02498287.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 112]
 gi|167919220|ref|ZP_02506311.1| threonyl-tRNA synthetase [Burkholderia pseudomallei BCC215]
 gi|217423341|ref|ZP_03454842.1| threonine--tRNA ligase [Burkholderia pseudomallei 576]
 gi|226199711|ref|ZP_03795264.1| threonine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
 gi|237812016|ref|YP_002896467.1| threonine--tRNA ligase [Burkholderia pseudomallei MSHR346]
 gi|238562605|ref|ZP_04610138.1| threonine--tRNA ligase [Burkholderia mallei GB8 horse 4]
 gi|242317788|ref|ZP_04816804.1| threonine--tRNA ligase [Burkholderia pseudomallei 1106b]
 gi|254177492|ref|ZP_04884147.1| threonyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
 gi|254180004|ref|ZP_04886603.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 1655]
 gi|254188582|ref|ZP_04895093.1| threonyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
 gi|254197889|ref|ZP_04904311.1| threonyl-tRNA synthetase [Burkholderia pseudomallei S13]
 gi|254199739|ref|ZP_04906105.1| threonyl-tRNA synthetase [Burkholderia mallei FMH]
 gi|254206061|ref|ZP_04912413.1| threonyl-tRNA synthetase [Burkholderia mallei JHU]
 gi|254259413|ref|ZP_04950467.1| threonine--tRNA ligase [Burkholderia pseudomallei 1710a]
 gi|254297839|ref|ZP_04965292.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 406e]
 gi|254358432|ref|ZP_04974705.1| threonyl-tRNA synthetase [Burkholderia mallei 2002721280]
 gi|73919776|sp|Q62KI2|SYT_BURMA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|73919777|sp|Q63TM2|SYT_BURPS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|123771913|sp|Q3JT13|SYT_BURP1 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|166223324|sp|A3MJT8|SYT_BURM7 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|166223325|sp|A2S2N6|SYT_BURM9 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|166223326|sp|A1V3R3|SYT_BURMS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|166223327|sp|A3NUI4|SYT_BURP0 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|166223328|sp|A3N8T1|SYT_BURP6 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|52209972|emb|CAH35944.1| threonyl-tRNA synthetase [Burkholderia pseudomallei K96243]
 gi|52428719|gb|AAU49312.1| threonyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
 gi|76580310|gb|ABA49785.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
 gi|121229611|gb|ABM52129.1| threonyl-tRNA synthetase [Burkholderia mallei SAVP1]
 gi|124293838|gb|ABN03107.1| threonine--tRNA ligase [Burkholderia mallei NCTC 10229]
 gi|126221009|gb|ABN84515.1| threonine--tRNA ligase [Burkholderia pseudomallei 668]
 gi|126227144|gb|ABN90684.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|126242219|gb|ABO05312.1| threonine--tRNA ligase [Burkholderia mallei NCTC 10247]
 gi|134246235|gb|EBA46324.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 305]
 gi|147749335|gb|EDK56409.1| threonyl-tRNA synthetase [Burkholderia mallei FMH]
 gi|147753504|gb|EDK60569.1| threonyl-tRNA synthetase [Burkholderia mallei JHU]
 gi|148027559|gb|EDK85580.1| threonyl-tRNA synthetase [Burkholderia mallei 2002721280]
 gi|157806992|gb|EDO84162.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 406e]
 gi|157936261|gb|EDO91931.1| threonyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
 gi|160698531|gb|EDP88501.1| threonyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
 gi|169654630|gb|EDS87323.1| threonyl-tRNA synthetase [Burkholderia pseudomallei S13]
 gi|184210544|gb|EDU07587.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 1655]
 gi|217393199|gb|EEC33220.1| threonine--tRNA ligase [Burkholderia pseudomallei 576]
 gi|225928297|gb|EEH24331.1| threonine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
 gi|237505158|gb|ACQ97476.1| threonine--tRNA ligase [Burkholderia pseudomallei MSHR346]
 gi|238522290|gb|EEP85735.1| threonine--tRNA ligase [Burkholderia mallei GB8 horse 4]
 gi|242141027|gb|EES27429.1| threonine--tRNA ligase [Burkholderia pseudomallei 1106b]
 gi|243061341|gb|EES43527.1| threonine--tRNA ligase [Burkholderia mallei PRL-20]
 gi|254218102|gb|EET07486.1| threonine--tRNA ligase [Burkholderia pseudomallei 1710a]
          Length = 635

 Score =  708 bits (1827), Expect = 0.0,   Method: Composition-based stats.
 Identities = 312/643 (48%), Positives = 439/643 (68%), Gaps = 15/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +  PDGS++ +    T ++VA SI   LAK A+   ++G++ D S  + R+ S+ I+
Sbjct: 1   MVSIRLPDGSVRQYEHPVTVAEVAASIGPGLAKAALGGKLDGELVDTSALIDRDASLAIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   L +IRHS AH++A AV+ + P+ QV IGP+I++GFYYDF   +PF+ ++L  I
Sbjct: 61  TDKDADGLDIIRHSTAHLLAYAVKELHPDAQVTIGPVIDNGFYYDFSYHRPFTPEDLEAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+MQE+  RD P  ++ +S ++A   F S  E YK EI+ESIPA + + LY  G + DL
Sbjct: 121 EKRMQELAKRDEPVTRRVVSRDEAVSYFRSIGEKYKAEIIESIPASDEIKLYSHGSFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG++K F KLMKVAGAYWRGDS    L RIYGTAW  +++   YL+ LEE+E
Sbjct: 181 CRGPHVPSTGKLKVF-KLMKVAGAYWRGDSKNEQLQRIYGTAWTRKEDQDAYLHMLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL +++DLFHI E+  G++FWH KGW ++Q +  YMRR++    Y EI TP ++D
Sbjct: 240 KRDHRKLGKQLDLFHIQEEAPGMVFWHPKGWTLWQQVEQYMRRRLDAAGYLEIKTPMIMD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW +YR NMF       T  + R +A+KPMNCPGHV VF HGL+SYR+LP+R
Sbjct: 300 RSLWEASGHWQNYRENMFT------TESEKRDYAIKPMNCPGHVQVFKHGLRSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
            AEFGS +RNE SG+LHGLMRVRGF QDDAH+FCT++Q+ +E +  + L +S+Y+DFGF+
Sbjct: 354 YAEFGSCHRNEASGALHGLMRVRGFVQDDAHIFCTEDQINSEAIAFNKLAMSVYEDFGFD 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
           +I +KLS RPE+R+GSD  WD AE  ++  L          +    L GEGAFYGPK EY
Sbjct: 414 RIDIKLSLRPEQRMGSDETWDHAEEGLRNALKACG------LEWEELPGEGAFYGPKIEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+GR WQCGT+Q+D  LP R  A YV   + +  PVM+HRA+ GS+ERF+GI+IE+
Sbjct: 468 HIKDALGRSWQCGTLQLDMMLPERLGAEYVAEDNSRRRPVMLHRAIVGSMERFLGILIEH 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G +P+WL+P  A+V  I  S  EYA+ +A  L+   L +  D RNE I+YKIREH+++
Sbjct: 528 HAGAMPVWLAPAHAVVLNIAESQAEYARTVAQSLQKQGLRVSADLRNEKISYKIREHTLE 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K+P +++ GDKE   +++ +R  G      + +   +  L ++
Sbjct: 588 KVPYLLVVGDKEREAQTVAVRARGGVDLGVMPVEAFVERLRED 630


>gi|254804601|ref|YP_003082822.1| Threonyl-tRNA synthetase [Neisseria meningitidis alpha14]
 gi|254668143|emb|CBA04768.1| Threonyl-tRNA synthetase [Neisseria meningitidis alpha14]
          Length = 637

 Score =  708 bits (1826), Expect = 0.0,   Method: Composition-based stats.
 Identities = 305/645 (47%), Positives = 443/645 (68%), Gaps = 16/645 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +T PDGS++ +    T + +A SI   LAK AVA  +NGK+ D  DP+  + S++II
Sbjct: 1   MLNITLPDGSVRQYESPVTVAQIAASIGAGLAKAAVAGRVNGKLVDACDPITEDSSVQII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TP+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A I
Sbjct: 61  TPKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M+E+IA+D   +K      +A ++F+ + E YK+ +++ +P  E + +Y   E+ D+
Sbjct: 121 EARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLIDDMPKVEAMGMYHHQEYVDM 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+E
Sbjct: 181 CRGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKAYIQRIEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL +++DLFH+ ++  G++FWH KGW ++Q +  +MR+++    Y+E+ TPQ++D
Sbjct: 240 KRDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           +  W++SGHW++Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+R
Sbjct: 300 KTFWEKSGHWENYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF 
Sbjct: 354 LAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFH 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + VKLS RPE+R GSD +WD AE  ++  L          +    L GEGAFYGPK EY
Sbjct: 414 DVAVKLSLRPEQRAGSDEVWDKAEQGLRDALTACG------VEWEELPGEGAFYGPKIEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+GR WQCGT+Q+DF LP R +A YV  ++++  PVM+HRA+ GS+ERFIGI+IEN
Sbjct: 468 HVKDALGRSWQCGTLQLDFVLPERLDAEYVTENNDRARPVMLHRAILGSLERFIGILIEN 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G+ PLWL+P+Q ++  IT +  +Y +E+A  L++     E D RNE I YKIR++S  
Sbjct: 528 HAGSFPLWLAPVQLVIMNITENQADYCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQY 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           + P  I+ GDKE  E  + +R   +     + L D I  L +E  
Sbjct: 588 RFPYQIVVGDKEKQENKVAVR-RKAEDLGSLDLDDFIAQLQQEIT 631


>gi|218767842|ref|YP_002342354.1| putative threonyl-tRNA synthetase [Neisseria meningitidis Z2491]
 gi|22654142|sp|Q9JVA3|SYT_NEIMA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|121051850|emb|CAM08156.1| putative threonyl-tRNA synthetase [Neisseria meningitidis Z2491]
          Length = 637

 Score =  708 bits (1826), Expect = 0.0,   Method: Composition-based stats.
 Identities = 304/645 (47%), Positives = 445/645 (68%), Gaps = 16/645 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +T PDGS++ +    T + +A SI   LAK AVA  +NGK+ D  DP+  + +++II
Sbjct: 1   MLNITLPDGSVRQYESPVTVAQIAASIGAGLAKAAVAGRVNGKLVDACDPIVEDSAVQII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TP+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A I
Sbjct: 61  TPKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M+E+IA+D   +K      +A ++F+ + E YK+ +++ +P  E + +Y   E+ D+
Sbjct: 121 EARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLIDDMPEVEAMGMYHHQEYVDM 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+E
Sbjct: 181 CRGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKAYIQRIEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL +++DLFH+ ++  G++FWH KGW ++Q +  +MR+++    Y+E+ TPQ++D
Sbjct: 240 KRDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           +  W++SGHW++Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+R
Sbjct: 300 KTFWEKSGHWENYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF 
Sbjct: 354 LAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFH 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + VKLS RPE+R GSD +WD AE  ++  L          +  G L GEGAFYGPK EY
Sbjct: 414 DVSVKLSLRPEQRAGSDDVWDKAEQGLREALTACG------VEWGELPGEGAFYGPKIEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            ++DA+GR WQCGT+Q+DF LP R +A YV  ++++  PVM+HRA+ GS+ERFIGI+IEN
Sbjct: 468 HVRDALGRSWQCGTLQLDFVLPERLDAEYVTENNDRARPVMLHRAILGSLERFIGILIEN 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G+ PLWL+P+Q ++  IT +  +Y +E+A  L++    +E D RNE I YKIR++S  
Sbjct: 528 HAGSFPLWLAPVQLVIMNITENQADYCREVAAKLQAAGFRVELDLRNEKIGYKIRDNSQY 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           + P  I+ GDKE  E  + +R   +     + L D I  L +E  
Sbjct: 588 RFPYQIVVGDKEKQENKVAVR-RKAEDLGSLDLDDFIAQLQQEIT 631


>gi|161869662|ref|YP_001598829.1| threonyl-tRNA synthetase [Neisseria meningitidis 053442]
 gi|189083614|sp|A9M375|SYT_NEIM0 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|161595215|gb|ABX72875.1| threonyl-tRNA synthetase [Neisseria meningitidis 053442]
          Length = 637

 Score =  708 bits (1826), Expect = 0.0,   Method: Composition-based stats.
 Identities = 307/645 (47%), Positives = 443/645 (68%), Gaps = 16/645 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +T PDGS++ +    T + +A SI   LAK AVA  +NGK+ D  DP+  + S++II
Sbjct: 1   MLNITLPDGSVRQYESPVTVAQIAASIGAGLAKAAVAGKVNGKLVDACDPITEDSSVQII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TP+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A I
Sbjct: 61  TPKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M+E+IA+D   +K      +A ++F+ + E YK+ +++ +P  E + +Y   E+ D+
Sbjct: 121 EARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLIDDMPEVEAMGMYHHQEYVDM 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+E
Sbjct: 181 CRGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKAYIQRIEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL +++DLFH+ ++  G++FWH KGW ++Q +  +MR+++    Y+E+ TPQ++D
Sbjct: 240 KRDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           +  W++SGHWD+Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+R
Sbjct: 300 KTFWEKSGHWDNYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF 
Sbjct: 354 LAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFH 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + VKLS RPEKR GSD +WD AE  ++  L          +  G L GEGAFYGPK EY
Sbjct: 414 DVSVKLSLRPEKRAGSDDVWDKAEQGLREALTACG------VEWGELPGEGAFYGPKIEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            ++DA+GR WQCGT+Q+DF LP R  A YV  ++++  PVM+HRA+ GS+ERFIGI+IEN
Sbjct: 468 HVRDALGRSWQCGTLQLDFVLPERLGAEYVTENNDRARPVMLHRAILGSLERFIGILIEN 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G+ PLWL+P+Q ++  IT +  +Y +E+A  L++     E D RNE I YKIR++S  
Sbjct: 528 HAGSFPLWLAPVQLVIMNITENQADYCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQY 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           + P  I+ GDKE  E  + +R   +     + L D I  L +E  
Sbjct: 588 RFPYQIVVGDKEKQENKVAVR-RKAEDLGSLDLDDFIAQLQQEIT 631


>gi|167836852|ref|ZP_02463735.1| threonyl-tRNA synthetase [Burkholderia thailandensis MSMB43]
          Length = 635

 Score =  708 bits (1826), Expect = 0.0,   Method: Composition-based stats.
 Identities = 312/643 (48%), Positives = 438/643 (68%), Gaps = 15/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +  PDGS++ +    T ++VA SI   LAK A+   ++G++ D S  + R+ S+ I+
Sbjct: 1   MVSIRLPDGSVRQYEHPVTVAEVAASIGPGLAKAALGGKLDGELVDTSALIDRDASLAIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   L +IRHS AH++A AV+ + P+ QV IGP+I++GFYYDF   +PF+ ++L QI
Sbjct: 61  TDKDADGLDIIRHSTAHLLAYAVKELHPDAQVTIGPVIDNGFYYDFSYHRPFTPEDLEQI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+MQE+  RD P  ++ +S ++A   F S  E YK EI+ESIP  + + LY  G + DL
Sbjct: 121 EKRMQELAKRDEPVTRRVVSRDEAVSYFRSIGEKYKAEIIESIPVSDEIKLYSHGGFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG++K F KLMKVAGAYWRGDS    L RIYGTAW  +++   YL+ LEE+E
Sbjct: 181 CRGPHVPSTGKLKVF-KLMKVAGAYWRGDSKNEQLQRIYGTAWTKKEDQDAYLHMLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL +++DLFH+ E+  G++FWH KGW ++Q +  YMRR++    Y EI TP ++D
Sbjct: 240 KRDHRKLGKQLDLFHLQEESPGMVFWHPKGWTLWQQVEQYMRRRLDAAGYLEIKTPMIMD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW +YR NMF       T  + R +A+KPMNCPGHV VF HGL+SYR+LP+R
Sbjct: 300 RSLWEASGHWQNYRENMFT------TESEKRDYAIKPMNCPGHVQVFKHGLRSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
            AEFGS +RNE SG+LHGLMRVRGF QDDAH+FCT++Q+ +E +  + L +S+Y DFGF+
Sbjct: 354 YAEFGSCHRNEASGALHGLMRVRGFVQDDAHIFCTEDQINSEAIAFNKLAMSVYADFGFD 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
           +I +KLS RPE+R+GSD  WD AE  ++  L          +    L GEGAFYGPK EY
Sbjct: 414 RIDIKLSLRPEQRMGSDETWDHAEEGLRNALKACG------LEWEELPGEGAFYGPKIEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+GR WQCGT+Q+D  LP R  A YV   + +  PVM+HRA+ GS+ERF+GI+IE+
Sbjct: 468 HIKDALGRSWQCGTLQLDMMLPERLGAEYVAEDNSRRRPVMLHRAIVGSMERFLGILIEH 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G +P+WL+P  A+V  I  S  EYAQ +A  L+   L +  D RNE I+YKIREH+++
Sbjct: 528 HAGAMPVWLAPAHAVVLNIAESQAEYAQTVAQSLQKQGLRVSADLRNEKISYKIREHTLE 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K+P +++ GDKE   +++ +R  G      + +   +  L ++
Sbjct: 588 KVPYLLVVGDKEREAQTVAVRARGGVDLGVMPVEAFVERLRED 630


>gi|209966088|ref|YP_002299003.1| threonyl-tRNA synthetase ThrS [Rhodospirillum centenum SW]
 gi|238065118|sp|B6IV67|SYT_RHOCS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|209959554|gb|ACJ00191.1| threonyl-tRNA synthetase ThrS [Rhodospirillum centenum SW]
          Length = 651

 Score =  707 bits (1825), Expect = 0.0,   Method: Composition-based stats.
 Identities = 326/647 (50%), Positives = 448/647 (69%), Gaps = 8/647 (1%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            + +T PDG ++ FP   TG  +A +I++SL K A+AV I+GK  DL+ PV  +  +EI+
Sbjct: 1   MVSITLPDGGVRTFPRGTTGGQIASAIAKSLGKAALAVKIDGKQRDLALPVEQDCRLEIL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T E P +L +IRH  AHIMAEAVQ+++P  QV IGP I  GFYYDF + +PF+ D+L +I
Sbjct: 61  TRESPEALELIRHDAAHIMAEAVQALYPGTQVTIGPAIATGFYYDFARSEPFTPDDLVKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E KM EI+  D+PF ++    + A E F S  E YK +I+E +PA E +T+YRQG W+DL
Sbjct: 121 EAKMHEIVNADAPFTREVWKRDDAIEHFRSIGEKYKAQIIEDLPATETITIYRQGRWYDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ STG+V   FKLMKVAGAYWRGD+   ML RIYGTAW T++EL  +L+ +EE+E
Sbjct: 181 CRGPHLPSTGKVGHAFKLMKVAGAYWRGDARNEMLQRIYGTAWRTEKELADHLHQIEEAE 240

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL REMDLFH+ E+  G +FWH KGW +++TL +Y+R K+    Y E+ TPQ+ D
Sbjct: 241 KRDHRKLGREMDLFHVQEEAVGSVFWHPKGWALYRTLENYIRTKLDAAGYVEVRTPQLYD 300

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             L++ SGHWD Y  NMF ++ +       +   +KPMNCP HV +F  GLKSYR+LP+R
Sbjct: 301 SSLFKASGHWDMYGDNMFKIRESVAEDGTEKFLGVKPMNCPAHVQIFRQGLKSYRDLPLR 360

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AEFG+ +RNEPSG+LHG++RVR FTQDDAH+FCT++Q+  E  +   L + +YKD GF+
Sbjct: 361 MAEFGNCHRNEPSGALHGILRVRNFTQDDAHIFCTEDQVGQEAKEYFALQLGVYKDLGFD 420

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
           KI VKL+ RP+ R+G+D  WD AE  ++  L        + +    L GEGAFYGPK E+
Sbjct: 421 KIAVKLALRPDVRLGTDETWDKAEESLRVALRA------NDLEFEELPGEGAFYGPKVEF 474

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L DAIGR WQCGT+Q+DF LP R +A Y+     +  PVM+HRA+ GS+ERFIG+MIE+
Sbjct: 475 HLTDAIGRSWQCGTLQLDFQLPERLDASYIGQDGARHRPVMLHRAILGSLERFIGMMIEH 534

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  PLWL+P+Q +V TI S A  YAQ +A  L+   L +E D RNE IN K+REHS+ 
Sbjct: 535 YAGKFPLWLAPVQVVVATIVSEADAYAQTVAETLRRAGLRVEADVRNEKINLKVREHSLA 594

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
           K+P++++ G +EA + ++ +RR G    + ++L DA+  L  E+  P
Sbjct: 595 KVPVMLVVGAREAEQGTVAVRRLGGKDQEVLALGDAVARLKDEARSP 641


>gi|148653933|ref|YP_001281026.1| threonyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
 gi|172048584|sp|A5WHD5|SYT_PSYWF RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|148573017|gb|ABQ95076.1| threonyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
          Length = 644

 Score =  707 bits (1825), Expect = 0.0,   Method: Composition-based stats.
 Identities = 305/642 (47%), Positives = 441/642 (68%), Gaps = 15/642 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +T PDG++K F    T  +VA+SI   LAK  +A  ++GK+ D SDP+ ++ S+EI+
Sbjct: 1   MVAITLPDGNVKEFDGATTVMEVAQSIGPGLAKATIAGRVDGKLVDASDPITQDASVEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   + +IRHS AH++  AV+ ++P V++ IGP+IEDGFYYD   E+PF+ +++A I
Sbjct: 61  TAKDKDGVDIIRHSTAHLLGHAVKQLYPNVKMVIGPVIEDGFYYDIFSEKPFTPEDMAAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M E+I ++   +K+    E+A ++FE + E YK++++  +P ++ + LY   E+ D+
Sbjct: 121 EKRMAELIKQNYDVIKKMTPREEAIKIFEERGEDYKLKLIADMPEEKELGLYHHQEYVDM 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +T  +K F KLMK++GAYWRGD+    L RIYGTAW  +++L  Y+  +EE+E
Sbjct: 181 CRGPHVPNTRFLKVF-KLMKMSGAYWRGDAKNEQLQRIYGTAWADKKDLQAYIQRIEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KRDHRK+ + ++LFH+ E   G++FWH  GW I+Q L  YMR+ +  + Y+EI TPQ++D
Sbjct: 240 KRDHRKIGKALNLFHMQEQSPGMVFWHPNGWTIYQVLEQYMRKVQKDNGYQEIKTPQIVD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW++SGHW +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYRELP+R
Sbjct: 300 RSLWEKSGHWGNYATNMFT------TSSESRDYAVKPMNCPCHVQVFNQGLKSYRELPIR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+ Q+  E      L + +YKDFGF+
Sbjct: 354 LAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTQAQIQEEVANFIKLTLDVYKDFGFD 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
           +I +KLSTRPEKRVG+D  WD AE  +   LD+        +    L GEGAFYGPK E+
Sbjct: 414 QIEMKLSTRPEKRVGTDESWDIAEKALADALDSSG------LEWEYLPGEGAFYGPKIEF 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            LKD++GR WQCGTIQVD N+P R  A +VN ++E+  P+M+HRA+ GS ERF+G++IE+
Sbjct: 468 SLKDSLGRVWQCGTIQVDPNMPERLEAEFVNENNERETPIMLHRAILGSFERFLGMLIEH 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G +P+WL+P Q +V  IT    +  Q +A+ L++  L   TD RNE I +KIRE +++
Sbjct: 528 YAGWMPVWLAPQQVVVMNITDKQADACQNVASELQNAGLRAITDLRNEKIGFKIRERTLE 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +IP +++ GDKE     + +R         +S+ D I ++ K
Sbjct: 588 RIPYMLVLGDKEVESGQVNVRTREGENLGVMSVADFIELVQK 629


>gi|170744367|ref|YP_001773022.1| threonyl-tRNA synthetase [Methylobacterium sp. 4-46]
 gi|168198641|gb|ACA20588.1| threonyl-tRNA synthetase [Methylobacterium sp. 4-46]
          Length = 670

 Score =  707 bits (1825), Expect = 0.0,   Method: Composition-based stats.
 Identities = 384/647 (59%), Positives = 492/647 (76%), Gaps = 6/647 (0%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           LTFPDG+ + +    TG  V E I++SLAK+ VA+A++G+V DL D +  +  IE +   
Sbjct: 4   LTFPDGATRAYDAAVTGRAVVEGIAKSLAKRTVAMALDGQVRDLDDAITRDARIEFLDRT 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           DPR+L +IRH CAH++AEAVQS+WP  QV IGP+IE+GFYYDF +E PFS ++   IE +
Sbjct: 64  DPRALELIRHDCAHVLAEAVQSLWPGTQVTIGPVIENGFYYDFYRETPFSPEDFPAIEAR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+EIIARD+ F K+  + +  R LF  K E++KVE++++IP  E++ +YRQGEWFDLCRG
Sbjct: 124 MREIIARDAAFTKEVWARDAVRALFAEKGESFKVELVDAIPEGEDLKIYRQGEWFDLCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PH+ STG+V   FKLMKVAGAYWRGDS +PMLSRIYGTAW +Q +L  YL+ LEE+E+RD
Sbjct: 184 PHMTSTGKVGTAFKLMKVAGAYWRGDSTKPMLSRIYGTAWASQADLDAYLHRLEEAERRD 243

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHLW 305
           HR+L REMDLFH  E+G GV+FWH KGW +FQ LI+YMRR++K DY E+N PQ+LD+ LW
Sbjct: 244 HRRLGREMDLFHFQEEGPGVVFWHPKGWTLFQELIAYMRRRLKADYREVNAPQILDKALW 303

Query: 306 QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEF 365
           + SGHWD YR NMF  K      +D R FA+KPMNCPGHV +F HGLKSYR+LP+RLAEF
Sbjct: 304 ETSGHWDWYRENMFVTK-----TEDERVFAIKPMNCPGHVQIFKHGLKSYRDLPLRLAEF 358

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
           G+V R EPSG+LHGLMRVR FTQDDAHVFCT+ Q+  ECLKI++LI+S Y DFGF++I+V
Sbjct: 359 GAVSRYEPSGALHGLMRVRAFTQDDAHVFCTEAQLAAECLKINDLILSTYADFGFDEIVV 418

Query: 426 KLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKD 485
           KLSTRPEKRVGSDALWD AE +M  VL  I+  S  RI T +  GEGAFYGPKFEY+L+D
Sbjct: 419 KLSTRPEKRVGSDALWDHAEAVMTRVLSEIEEQSGGRIRTAINPGEGAFYGPKFEYVLRD 478

Query: 486 AIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           AIGRDWQCGT QVDFNLP RF AFYV++  +K  PVM+HRA+ GS+ERF GI+IE+F G+
Sbjct: 479 AIGRDWQCGTTQVDFNLPERFGAFYVDADGQKKTPVMVHRAICGSMERFAGILIEHFAGH 538

Query: 546 LPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPI 605
            PLWL+P+Q +V TITS A  YA ++    ++  L  E D RNE INYK+REHS  K+P+
Sbjct: 539 FPLWLAPLQVVVATITSDADPYASDVLAACEAAGLRAEIDLRNEKINYKVREHSHAKVPV 598

Query: 606 IIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           +++ G +E  ER++ IRR GS  T+ + L  A+  L  E+  PD ++
Sbjct: 599 MLVVGRREGEERTVSIRRLGSQQTRTLPLDQALADLVGEAATPDRRR 645


>gi|304391869|ref|ZP_07373811.1| threonyl-tRNA synthetase [Ahrensia sp. R2A130]
 gi|303296098|gb|EFL90456.1| threonyl-tRNA synthetase [Ahrensia sp. R2A130]
          Length = 663

 Score =  707 bits (1824), Expect = 0.0,   Method: Composition-based stats.
 Identities = 376/655 (57%), Positives = 502/655 (76%), Gaps = 8/655 (1%)

Query: 1   MPSD-IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGS 58
           M ++ +++ FPDG+++++    TG DVAE IS+SL+KK++A  ++GK+ DLS P+   G 
Sbjct: 1   MSNESLEIRFPDGNVRHYDPGTTGRDVAEGISKSLSKKSMAYMLDGKLTDLSAPLAASGD 60

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           +E++  +D R+L +IRH CAH++AEAVQ IWP+ +V IGP+IE+GFYYDFD+E PF+ ++
Sbjct: 61  LELVLRDDDRALELIRHDCAHVLAEAVQDIWPDTKVTIGPVIENGFYYDFDRETPFTPED 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L +IEKKM+EII R+ PF  +  + ++A+  FE   E YK E++++IP  +N+ +Y+QGE
Sbjct: 121 LERIEKKMREIIQRNDPFTHEVWTRDQAKAHFEKIGETYKAELIDAIPEGDNLNIYKQGE 180

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           W DLC GPH  STG++   FKLM VAGAYWRGDS+  MLSRIYGTAW  +++L QYL+ L
Sbjct: 181 WMDLCLGPHGPSTGKIGNAFKLMSVAGAYWRGDSDNQMLSRIYGTAWADEKQLKQYLHML 240

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE++KRDHRKL REMDLFH  E+G GV+FWH KGWK+FQ L+SYMRR+I++  Y+E+N P
Sbjct: 241 EEAQKRDHRKLGREMDLFHFQEEGPGVVFWHAKGWKVFQHLVSYMRRRIEEHGYDEVNAP 300

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           Q+LD+ LW+ SGHW  YR NMF         +D R FA+KPMNCPGHV +F +GL+SYRE
Sbjct: 301 QILDKALWETSGHWGWYRENMFTT-----VTEDERQFAIKPMNCPGHVQIFKNGLRSYRE 355

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LPV++AEFG+V+R EPSG+LHGLMRVRGFTQDDAHVFCT EQ+  ECL+I++LI+S Y D
Sbjct: 356 LPVKMAEFGNVHRYEPSGALHGLMRVRGFTQDDAHVFCTPEQLEEECLRINDLILSTYSD 415

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF  I+VKLSTRPEKRVGS+  WD +E IM  VL+ I   S  RI T +  GEGAFYGP
Sbjct: 416 FGFGDIVVKLSTRPEKRVGSEEGWDRSEEIMGKVLEKIAADSDGRIKTELNPGEGAFYGP 475

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           KFEY+L+DAIGRDWQCGT QVDF LP RF AFY++  S+K  PVM+HRA+ GS+ERFIGI
Sbjct: 476 KFEYVLRDAIGRDWQCGTTQVDFALPERFGAFYIDKDSQKQEPVMVHRAICGSMERFIGI 535

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE+F G+ PLW+SP+Q +V TITS A  Y + +A  L+   L +ETDFRNE INYK+RE
Sbjct: 536 LIEHFAGHFPLWISPLQVVVATITSEADPYGEIVAEELREAGLRVETDFRNEKINYKVRE 595

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           HS+ K+P+II  G +EA ER++ +RR GS     ++L +A+  L+ E++ PD ++
Sbjct: 596 HSLAKVPVIIAVGGREAEERTVSVRRLGSKHQTSMTLDEAVASLSDEAIAPDIRR 650


>gi|134299469|ref|YP_001112965.1| threonyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
 gi|189083605|sp|A4J4Y7|SYT_DESRM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|134052169|gb|ABO50140.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase
           [Desulfotomaculum reducens MI-1]
          Length = 635

 Score =  707 bits (1824), Expect = 0.0,   Method: Composition-based stats.
 Identities = 289/643 (44%), Positives = 424/643 (65%), Gaps = 16/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+T  DGS++ + V  T  +VA+SIS+ LA++A+A  +NGK+ DL  P+  + ++E++
Sbjct: 1   MIKITLKDGSVREYAVGTTVLEVAKSISQGLAREALAGKVNGKIVDLEYPLKEDAALELL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T  D     V RHS AH++A+AV+ ++P+ ++AIGP I+DG+YYDFD EQPF+  +L +I
Sbjct: 61  TFNDEEGKTVYRHSTAHVLAQAVKRLFPDAKLAIGPAIQDGYYYDFDVEQPFTPAQLERI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E++M +II  D PF +  LS E+A E F+ + E YK+E++  +P    ++ Y+QG++ DL
Sbjct: 121 EEEMNKIIKEDIPFKRVELSREEALEHFKKQDEIYKIELITDLPEDAVISCYQQGDFDDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPHV STG++K   KLM +AGAYWRG     ML RIYGT++  +  L ++L+ +EE++
Sbjct: 181 CAGPHVPSTGRLKSL-KLMSIAGAYWRGSEKNKMLQRIYGTSFPKKAMLDEHLFRIEEAK 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD 301
           +RDHRKL +E+DLF I E+G G  F+H KG  +   L ++ R++ K   Y+EI TP +L+
Sbjct: 240 RRDHRKLGQELDLFSIQEEGPGFPFFHPKGMVLRNELENFWRQEHKKRGYQEIRTPIILN 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + +W+QSGHW  Y+ NM+  K       D   +A+KPMNCPG + V+   + SYR+LP+R
Sbjct: 300 RSMWEQSGHWAHYKDNMYFTKI------DEADYAVKPMNCPGSILVYKTRMHSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
             E G V+R+E SG+LHGLMRVR FTQDDAH+F    Q+ +E + + +L    Y  FG  
Sbjct: 354 WGELGLVHRHELSGALHGLMRVRCFTQDDAHIFMLPSQIKDEIIGVIDLFDYFYNTFGLN 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPEK +GSD +W+ A N ++  L+        +++  V  G+GAFYGPK ++
Sbjct: 414 YH-VELSTRPEKSMGSDEMWEVATNSLRDALEA------KKMDYKVNEGDGAFYGPKIDF 466

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L D++GR WQCGTIQ+DF +P RFN  YV    +K  PVMIHR VFGSIERFIGI+ E+
Sbjct: 467 HLTDSLGRTWQCGTIQLDFQMPERFNLNYVGEDGQKHRPVMIHRVVFGSIERFIGILTEH 526

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           F G  P+WL+P+Q  V  IT    EYA+E+   L+   + +E D RNE INYKIRE   +
Sbjct: 527 FAGAFPVWLAPVQVKVLPITDRHHEYARELVKRLQGLDIRVELDARNEKINYKIREAQTQ 586

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIP +++ GD+E  + ++ +R  G      +S+ D I  +  +
Sbjct: 587 KIPYMLVIGDREMEQGAVAVRERGKGDVGAISVGDFIKKIEDD 629


>gi|304387978|ref|ZP_07370150.1| threonine--tRNA ligase [Neisseria meningitidis ATCC 13091]
 gi|304337977|gb|EFM04115.1| threonine--tRNA ligase [Neisseria meningitidis ATCC 13091]
          Length = 643

 Score =  707 bits (1824), Expect = 0.0,   Method: Composition-based stats.
 Identities = 304/645 (47%), Positives = 446/645 (69%), Gaps = 16/645 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +T PDGS++ +    T + +A SI   LAK AVA  +NGK+ D  DP+  + +++II
Sbjct: 7   MLNITLPDGSVRQYESPVTVAQIAASIGVGLAKAAVAGRVNGKLVDACDPIVEDSAVQII 66

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TP+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A I
Sbjct: 67  TPKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAI 126

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M+E+IA+D   +K      +A ++F+ + E YK+ +++ +P  E + +Y   E+ D+
Sbjct: 127 EARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLIDDMPEVEAMGMYHHQEYVDM 186

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+E
Sbjct: 187 CRGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKAYIQRIEEAE 245

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL +++DLFH+ ++  G++FWH KGW ++Q +  +MR+++    Y+E+ TPQ++D
Sbjct: 246 KRDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMD 305

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           +  W++SGHW++Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+R
Sbjct: 306 KTFWEKSGHWENYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMR 359

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF 
Sbjct: 360 LAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFH 419

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + VKLS RPE+R GSD +WD AE  ++  L          +  G L GEGAFYGPK EY
Sbjct: 420 DVSVKLSLRPEQRAGSDDVWDKAEQGLREALTACG------VEWGELPGEGAFYGPKIEY 473

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            ++DA+GR WQCGT+Q+DF LP R +A YV  ++++  PVM+HRA+ GS+ERFIGI+IEN
Sbjct: 474 HVRDALGRSWQCGTLQLDFVLPERLDAEYVTENNDRARPVMLHRAILGSLERFIGILIEN 533

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G+ PLWL+P+Q ++  IT +  +Y +E+A  L++    +E D RNE I YKIR++S  
Sbjct: 534 YAGSFPLWLAPVQLVIMNITENQADYCREVAAKLQAAGFRVELDLRNEKIGYKIRDNSQY 593

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           + P  I+ GDKE  E  + +R   +     + L D I  L +E  
Sbjct: 594 RFPYQIVVGDKEKQENKVAVR-RKAEDLGSLDLDDFIAQLQQEIT 637


>gi|319410089|emb|CBY90425.1| threonyl-tRNA synthetase (threonine-tRNA ligase; ThrRS) [Neisseria
           meningitidis WUE 2594]
          Length = 637

 Score =  707 bits (1824), Expect = 0.0,   Method: Composition-based stats.
 Identities = 304/645 (47%), Positives = 444/645 (68%), Gaps = 16/645 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +T PDGS++ +    T + +A SI   LAK AVA  +NGK+ D  DP+  + +++II
Sbjct: 1   MLNITLPDGSVRQYESPVTVAQIAASIGAGLAKAAVAGRVNGKLVDACDPIVEDSAVQII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TP+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A I
Sbjct: 61  TPKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M+E+IA+D   +K      +A ++F+ + E YK+ +++ +P  E + +Y   E+ D+
Sbjct: 121 EARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLIDDMPEVEAMGMYHHQEYVDM 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+E
Sbjct: 181 CRGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKAYIQRIEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL +++DLFH+ ++  G++FWH KGW ++Q +  +MR+++    Y+E+ TPQ++D
Sbjct: 240 KRDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           +  W++SGHW++Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+R
Sbjct: 300 KTFWEKSGHWENYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF 
Sbjct: 354 LAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFH 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + VKLS RPE+R GSD +WD AE  ++  L          +  G L GEGAFYGPK EY
Sbjct: 414 DVSVKLSLRPEQRAGSDDVWDKAEQGLREALTACG------VEWGELPGEGAFYGPKIEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            ++DA+GR WQCGT+Q+DF LP R +A YV  ++++  PVM+HRA+ GS+ERFIGI+IEN
Sbjct: 468 HVRDALGRSWQCGTLQLDFVLPERLDAEYVTENNDRARPVMLHRAILGSLERFIGILIEN 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G+ PLWL+P+Q ++  IT +  +Y +E+A  L++     E D RNE I YKIR++S  
Sbjct: 528 HAGSFPLWLAPVQLVIMNITENQADYCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQY 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           + P  I+ GDKE  E  + +R   +     + L D I  L +E  
Sbjct: 588 RFPYQIVVGDKEKQENKVAVR-RKAEDLGSLDLDDFIAQLQQEIT 631


>gi|254674303|emb|CBA10087.1| Threonyl-tRNA synthetase [Neisseria meningitidis alpha275]
          Length = 637

 Score =  706 bits (1823), Expect = 0.0,   Method: Composition-based stats.
 Identities = 303/645 (46%), Positives = 444/645 (68%), Gaps = 16/645 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +T PDGS++ +    T + +A SI   LAK  VA  +NGK+ D  DP+  + S++II
Sbjct: 1   MLNITLPDGSVRQYESPVTVAQIAASIGAGLAKATVAGRVNGKLVDACDPITEDSSVQII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TP+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A I
Sbjct: 61  TPKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M+E+IA+D   +K      +A ++F+ + E YK+ +++ +   E + +Y   E+ D+
Sbjct: 121 EARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLIDDMSEVEAMGMYHHQEYVDM 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+E
Sbjct: 181 CRGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKAYIQRIEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL +++DLFH+ ++  G++FWH KGW ++Q +  +MR+++    Y+E+ TPQ++D
Sbjct: 240 KRDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           +  W++SGHW++Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+R
Sbjct: 300 KTFWEKSGHWENYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF 
Sbjct: 354 LAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFH 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + VKLS RPE+R GSD +WD AE  ++  L          +  G L GEGAFYGPK EY
Sbjct: 414 DVSVKLSLRPEQRAGSDDVWDKAEQGLREALTACG------VEWGELPGEGAFYGPKIEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            ++DA+GR WQCGT+Q+DF LP R +A YV  ++++  PVM+HRA+ GS+ERFIGI+IEN
Sbjct: 468 HVRDALGRSWQCGTLQLDFVLPERLDAEYVTENNDRARPVMLHRAILGSLERFIGILIEN 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G+ PLWL+P+Q ++  IT +  +Y +E+A  L++    +E D RNE I YKIR++S  
Sbjct: 528 YAGSFPLWLAPVQLVIMNITENQADYCREVAAKLQAAGFRVELDLRNEKIGYKIRDNSQY 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           + P  I+ GDKE  E  + +R   +     + L D I  L +E  
Sbjct: 588 RFPYQIVVGDKEKQENKVAVR-RKAEDLGSLDLDDFIAQLQQEIT 631


>gi|325136057|gb|EGC58667.1| threonyl-tRNA synthetase [Neisseria meningitidis M0579]
          Length = 643

 Score =  706 bits (1822), Expect = 0.0,   Method: Composition-based stats.
 Identities = 307/645 (47%), Positives = 444/645 (68%), Gaps = 16/645 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +T PDGS++ +    T + +A SI   LAK AVA  +NGK+ D  DP+  + +++II
Sbjct: 7   MLNITLPDGSVRQYESPVTVAQIAASIGAGLAKAAVAGRVNGKLVDACDPIVEDSAVQII 66

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TP+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A I
Sbjct: 67  TPKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAI 126

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M+E+IA+D   +K      +A ++F+ + E YK+ +++ +P  E + +Y   E+ D+
Sbjct: 127 EARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLIDDMPEVEAMGMYHHQEYVDM 186

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+E
Sbjct: 187 CRGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKAYIQRIEEAE 245

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL +++DLFH+ ++  G++FWH KGW ++Q +  +MR+++    Y+E+ TPQ++D
Sbjct: 246 KRDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMD 305

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           +  W++SGHWD+Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+R
Sbjct: 306 KTFWEKSGHWDNYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMR 359

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF 
Sbjct: 360 LAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFH 419

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + VKLS RPEKR GSD +WD AE  ++  L          +  G L GEGAFYGPK EY
Sbjct: 420 DVSVKLSLRPEKRAGSDDVWDKAEQGLREALTACG------VEWGELPGEGAFYGPKIEY 473

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            ++DA+GR WQCGT+Q+DF LP R NA YV  ++++  PVM+HRA+ GS+ERFIGI+IEN
Sbjct: 474 HVRDALGRSWQCGTLQLDFVLPERLNAEYVTENNDRARPVMLHRAILGSLERFIGILIEN 533

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G+ PLWL+P+Q ++  IT +  +Y +E+A  L++     E D RNE I YKIR++S  
Sbjct: 534 HAGSFPLWLAPVQMVIMNITENQADYCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQY 593

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           + P  I+ GDKE  E  + +R   +     + L D I  L +E  
Sbjct: 594 RFPYQIVVGDKEKQENKVAVR-RKAEDLGSLDLDDFIAQLQQEIT 637


>gi|316983701|gb|EFV62682.1| threonyl-tRNA synthetase [Neisseria meningitidis H44/76]
          Length = 648

 Score =  706 bits (1822), Expect = 0.0,   Method: Composition-based stats.
 Identities = 307/645 (47%), Positives = 443/645 (68%), Gaps = 16/645 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +T PDGS++ +    T + +A SI   LAK  VA  +NGK+ D  DP+  + +++II
Sbjct: 12  MLNITLPDGSVRQYESPVTVAQIAASIGAGLAKATVAGRVNGKLVDACDPIVEDSAVQII 71

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TP+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A I
Sbjct: 72  TPKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAI 131

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M+E+IA+D   +K      +A ++F+ + E YK+ +++ +P  E + +Y   E+ D+
Sbjct: 132 EARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLIDDMPEVEAMGMYHHQEYVDM 191

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+E
Sbjct: 192 CRGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKAYIQRIEEAE 250

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL +++DLFH+ ++  G++FWH KGW ++Q +  +MR+++    Y+E+ TPQ++D
Sbjct: 251 KRDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMD 310

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           +  W++SGHWD+Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+R
Sbjct: 311 KTFWEKSGHWDNYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMR 364

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L+I IYK FGF 
Sbjct: 365 LAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLIRIYKQFGFH 424

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + VKLS RPEKR GSD +WD AE  ++  L          +  G L GEGAFYGPK EY
Sbjct: 425 DVSVKLSLRPEKRAGSDDVWDKAEQGLREALTACG------VEWGELPGEGAFYGPKIEY 478

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            ++DA+GR WQCGT+Q+DF LP R NA YV  ++++  PVM+HRA+ GS+ERFIGI+IEN
Sbjct: 479 HVRDALGRSWQCGTLQLDFVLPERLNAEYVTENNDRARPVMLHRAILGSLERFIGILIEN 538

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G+ PLWL+P+Q ++  IT +  +Y +E+A  L++     E D RNE I YKIR++S  
Sbjct: 539 HAGSFPLWLAPVQLVIMNITENQADYCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQY 598

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           + P  I+ GDKE  E  + +R   +     + L D I  L +E  
Sbjct: 599 RFPYQIVVGDKEKQENKVAVR-RKAEDLGSLDLDDFIAQLQQEIT 642


>gi|147678291|ref|YP_001212506.1| threonyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
 gi|146274388|dbj|BAF60137.1| threonyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
          Length = 640

 Score =  706 bits (1822), Expect = 0.0,   Method: Composition-based stats.
 Identities = 290/646 (44%), Positives = 415/646 (64%), Gaps = 16/646 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           M   I +TFPDGS + +P      +VA+SIS  LA++A+A  ++G++ DL+ P+  + S+
Sbjct: 3   MAEKISVTFPDGSSREYPAGTPLMEVAQSISSRLAREALAARVDGRLMDLNRPLEKDASV 62

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           + +T E      V RHS AH+MA+AVQ ++P  ++AIGP I DGFYYDFD ++PF+ ++L
Sbjct: 63  QFLTFEHEEGRQVYRHSTAHVMAQAVQRLFPGTRLAIGPAIADGFYYDFDPQEPFTPEDL 122

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A+IEK+M+ II  D PF +  LS  +A  +F    + YKVE++E +P +  +++YRQGE+
Sbjct: 123 AKIEKEMENIIKADLPFERAELSRAEALAMFREAGQDYKVELIEDLPPEVPISVYRQGEF 182

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLC GPHV STG++K   KLM VAGAYWRG     ML RIYGT++  +  L +YL+ LE
Sbjct: 183 VDLCTGPHVPSTGRLK-AVKLMSVAGAYWRGSEKNKMLQRIYGTSFPKKAMLDEYLFRLE 241

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+++RDHRKL  E+DLF I ++G G  F+H KG  +   L  + R + +   Y+EI TP 
Sbjct: 242 EAKRRDHRKLGAELDLFSIHDEGPGFPFFHPKGMILRNELEKFWREEHQKRGYQEIRTPV 301

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L ++LW++SGHW+ YR NM+  +  D        +A+KPMNCPG + ++ + L SYREL
Sbjct: 302 ILSRNLWERSGHWEHYRENMYFTRIDDG------DYAVKPMNCPGSILIYKNRLHSYREL 355

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAE G V+R+E SG LHGLMRVR FTQDDAH+F    Q+  E + +  L+   Y+ F
Sbjct: 356 PIRLAELGLVHRHELSGVLHGLMRVRCFTQDDAHIFMLPSQVKEEIIGVIELVDDFYRVF 415

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF    V+LSTRPEK +GSD  W+ A   ++  L+         ++  V  G+GAFYGPK
Sbjct: 416 GFPYH-VELSTRPEKAMGSDETWEMATGALRDALEA------RGLDYRVNEGDGAFYGPK 468

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++ L+D++GR WQCGTIQ+DF +P +F+  Y+    +K  PVMIHR VFGSIERFIGI+
Sbjct: 469 IDFHLQDSLGRTWQCGTIQLDFLMPEKFDLTYIGEDGQKHRPVMIHRVVFGSIERFIGIL 528

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
            E+F G  P WL+P+Q  V  I      YA+++ + L    +  E D RNE I YKIRE 
Sbjct: 529 TEHFAGAFPAWLAPVQVRVLPIADRHAGYARKVLDCLTGAGIRAELDARNEKIGYKIREA 588

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
             +KIP +++ GDKEA   ++ +R   +     + L   +  L  E
Sbjct: 589 QAQKIPYMLVTGDKEAENGTVAVRHRTTGDMGAIPLGGFVDKLLDE 634


>gi|308388909|gb|ADO31229.1| putative threonyl-tRNA synthetase [Neisseria meningitidis alpha710]
 gi|325202484|gb|ADY97938.1| threonyl-tRNA synthetase [Neisseria meningitidis M01-240149]
 gi|325207764|gb|ADZ03216.1| threonyl-tRNA synthetase [Neisseria meningitidis NZ-05/33]
          Length = 637

 Score =  706 bits (1822), Expect = 0.0,   Method: Composition-based stats.
 Identities = 307/645 (47%), Positives = 444/645 (68%), Gaps = 16/645 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +T PDGS++ +    T + +A SI   LAK AVA  +NGK+ D  DP+  + +++II
Sbjct: 1   MLNITLPDGSVRQYESPVTVAQIAASIGAGLAKAAVAGRVNGKLVDACDPIVEDSAVQII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TP+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A I
Sbjct: 61  TPKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M+E+IA+D   +K      +A ++F+ + E YK+ +++ +P  E + +Y   E+ D+
Sbjct: 121 EARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLIDDMPEVEAMGMYHHQEYVDM 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+E
Sbjct: 181 CRGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKAYIQRIEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL +++DLFH+ ++  G++FWH KGW ++Q +  +MR+++    Y+E+ TPQ++D
Sbjct: 240 KRDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           +  W++SGHWD+Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+R
Sbjct: 300 KTFWEKSGHWDNYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF 
Sbjct: 354 LAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFH 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + VKLS RPEKR GSD +WD AE  ++  L          +  G L GEGAFYGPK EY
Sbjct: 414 DVSVKLSLRPEKRAGSDDVWDKAEQGLREALTACG------VEWGELPGEGAFYGPKIEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            ++DA+GR WQCGT+Q+DF LP R NA YV  ++++  PVM+HRA+ GS+ERFIGI+IEN
Sbjct: 468 HVRDALGRSWQCGTLQLDFVLPERLNAEYVTENNDRARPVMLHRAILGSLERFIGILIEN 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G+ PLWL+P+Q ++  IT +  +Y +E+A  L++     E D RNE I YKIR++S  
Sbjct: 528 HAGSFPLWLAPVQMVIMNITENQADYCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQY 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           + P  I+ GDKE  E  + +R   +     + L D I  L +E  
Sbjct: 588 RFPYQIVVGDKEKQENKVAVR-RKAEDLGSLDLDDFIAQLQQEIT 631


>gi|114570943|ref|YP_757623.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Maricaulis
           maris MCS10]
 gi|122315357|sp|Q0AM08|SYT_MARMM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|114341405|gb|ABI66685.1| Ser-tRNA(Thr) hydrolase [Maricaulis maris MCS10]
          Length = 644

 Score =  706 bits (1821), Expect = 0.0,   Method: Composition-based stats.
 Identities = 327/653 (50%), Positives = 447/653 (68%), Gaps = 14/653 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            I +T PDGS +  P  A+  D+A  IS+SLAK A+   ++G+  DL  P+  +  + II
Sbjct: 1   MINVTLPDGSKRELPDGASPLDLAADISKSLAKAAIIATVDGQDWDLKRPLDGDAQVAII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D ++L VIRH  AHI+A+AVQ ++P  QV IGP IEDGFYYDF + +PF+ ++   I
Sbjct: 61  TRKDDKALEVIRHDTAHILAQAVQDLFPGTQVTIGPAIEDGFYYDFARSEPFTPEDFEAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M EI+  D PF ++      A   FE   EAYK E++  +P  E +T+YRQGEWFDL
Sbjct: 121 EKRMGEIVDADLPFEREVWDRNDAIAKFEEMGEAYKAELIRDLPEDETITIYRQGEWFDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPH+ STG++ K FKLMKVAGAYWRGD    ML RIYGTAW   ++L  +L+ +EE+E
Sbjct: 181 CLGPHLPSTGKIGKAFKLMKVAGAYWRGDHRNAMLQRIYGTAWADDKQLKAHLHRIEEAE 240

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD 301
           KRDHRKL ++M+LFH  E+  G +FWH  GW++++T+ SYMRR+++   Y EI TPQ++D
Sbjct: 241 KRDHRKLGKQMELFHFQEEAQGQVFWHPNGWRLYRTVTSYMRRRLEAAGYVEIRTPQLMD 300

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           +  W+ SGHWD YR NMF         ++ +  A+KPMNCP HV VFN G KSYR+LP+R
Sbjct: 301 RKFWEASGHWDKYRENMFI----SSIDQEEKVLAVKPMNCPCHVQVFNQGQKSYRDLPLR 356

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AEFGS +R EPSGSLHGLMRVRGF QDDAH+FCT +Q+  E      L+ S+Y DFGFE
Sbjct: 357 MAEFGSCHRYEPSGSLHGLMRVRGFVQDDAHIFCTSDQITAEVSDFCELLKSVYADFGFE 416

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
           +  +K S RPE+RVGSD +WD AE  +K   +         ++     G+GAFYGPK ++
Sbjct: 417 EPRIKFSDRPEQRVGSDEVWDQAEASLKAAAEASG------LDYEYNPGDGAFYGPKLDF 470

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
           ++KDAIGR+WQ GTIQ DFNLP R +A ++   SEK  PVM+HRA+ GS+ERF+G++IE+
Sbjct: 471 VVKDAIGREWQTGTIQCDFNLPERLDASFIGDDSEKHRPVMLHRAILGSLERFLGVLIES 530

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G LP WL+P Q ++ TITS A  YA+E+   +    L  ETD RNE INYK+REHS+ 
Sbjct: 531 YAGKLPFWLAPRQVVIATITSDADGYAEEVKAAMVKAGLHAETDLRNEKINYKVREHSVG 590

Query: 602 KIPIIIICGDKEASERSIGIRRF--GSTTTQKVSLLDAIPILTKESLPPDCQK 652
           K+P+I + G KEA + ++ +R    G  T + +SL DAI  L++++  PD ++
Sbjct: 591 KVPVIAVVGRKEAEDGTLALRFLGEGGKTQEILSLADAIARLSEDAKAPDLKR 643


>gi|325127774|gb|EGC50682.1| threonyl-tRNA synthetase [Neisseria meningitidis N1568]
          Length = 637

 Score =  706 bits (1821), Expect = 0.0,   Method: Composition-based stats.
 Identities = 307/645 (47%), Positives = 443/645 (68%), Gaps = 16/645 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +T PDGS++ +    T + +A SI   LAK AVA  +NGK+ D  DP+  + +++II
Sbjct: 1   MLNITLPDGSVRQYESPVTVAQIAASIGAGLAKAAVAGRVNGKLVDACDPIVEDSAVQII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TP+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A I
Sbjct: 61  TPKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M+E+IA+D   +K      +A ++F+ + E YK+ +++ +   E + +Y   E+ D+
Sbjct: 121 EARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLIDDMSEVEAMGMYHHQEYVDM 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+E
Sbjct: 181 CRGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKAYIQRIEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL +++DLFH+ ++  G++FWH KGW ++Q +  +MR+++    Y+E+ TPQ++D
Sbjct: 240 KRDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           +  W++SGHWD+Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+R
Sbjct: 300 KTFWEKSGHWDNYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF 
Sbjct: 354 LAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFH 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + VKLS RPEKR GSD +WD AE  ++  L          +  G L GEGAFYGPK EY
Sbjct: 414 DVSVKLSLRPEKRAGSDDVWDKAEQGLREALTACG------VEWGELPGEGAFYGPKIEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+GR WQCGT+Q+DF LP R NA YV  ++++  PVM+HRA+ GS+ERFIGI+IEN
Sbjct: 468 HVKDALGRSWQCGTLQLDFVLPERLNAEYVTENNDRARPVMLHRAILGSLERFIGILIEN 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G+ PLWL+P+Q ++  IT +  +Y +E+A  L++     E D RNE I YKIR++S  
Sbjct: 528 HAGSFPLWLAPVQLVIMNITENQADYCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQY 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           + P  I+ GDKE  E  + +R   +     + L D I  L +E  
Sbjct: 588 RFPYQIVVGDKEKQENKVAVR-RKAEDLGSLDLDDFIAQLQQEIT 631


>gi|15676618|ref|NP_273762.1| threonyl-tRNA synthetase [Neisseria meningitidis MC58]
 gi|22654143|sp|Q9K095|SYT_NEIMB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|7225946|gb|AAF41133.1| threonyl-tRNA synthetase [Neisseria meningitidis MC58]
 gi|325140125|gb|EGC62654.1| threonyl-tRNA synthetase [Neisseria meningitidis CU385]
 gi|325200596|gb|ADY96051.1| threonyl-tRNA synthetase [Neisseria meningitidis H44/76]
          Length = 637

 Score =  706 bits (1821), Expect = 0.0,   Method: Composition-based stats.
 Identities = 307/645 (47%), Positives = 443/645 (68%), Gaps = 16/645 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +T PDGS++ +    T + +A SI   LAK  VA  +NGK+ D  DP+  + +++II
Sbjct: 1   MLNITLPDGSVRQYESPVTVAQIAASIGAGLAKATVAGRVNGKLVDACDPIVEDSAVQII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TP+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A I
Sbjct: 61  TPKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M+E+IA+D   +K      +A ++F+ + E YK+ +++ +P  E + +Y   E+ D+
Sbjct: 121 EARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLIDDMPEVEAMGMYHHQEYVDM 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+E
Sbjct: 181 CRGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKAYIQRIEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL +++DLFH+ ++  G++FWH KGW ++Q +  +MR+++    Y+E+ TPQ++D
Sbjct: 240 KRDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           +  W++SGHWD+Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+R
Sbjct: 300 KTFWEKSGHWDNYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L+I IYK FGF 
Sbjct: 354 LAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLIRIYKQFGFH 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + VKLS RPEKR GSD +WD AE  ++  L          +  G L GEGAFYGPK EY
Sbjct: 414 DVSVKLSLRPEKRAGSDDVWDKAEQGLREALTACG------VEWGELPGEGAFYGPKIEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            ++DA+GR WQCGT+Q+DF LP R NA YV  ++++  PVM+HRA+ GS+ERFIGI+IEN
Sbjct: 468 HVRDALGRSWQCGTLQLDFVLPERLNAEYVTENNDRARPVMLHRAILGSLERFIGILIEN 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G+ PLWL+P+Q ++  IT +  +Y +E+A  L++     E D RNE I YKIR++S  
Sbjct: 528 HAGSFPLWLAPVQLVIMNITENQADYCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQY 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           + P  I+ GDKE  E  + +R   +     + L D I  L +E  
Sbjct: 588 RFPYQIVVGDKEKQENKVAVR-RKAEDLGSLDLDDFIAQLQQEIT 631


>gi|261392911|emb|CAX50492.1| threonyl-tRNA synthetase (threonine--tRNA ligase; ThrRS) [Neisseria
           meningitidis 8013]
 gi|325203807|gb|ADY99260.1| threonyl-tRNA synthetase [Neisseria meningitidis M01-240355]
          Length = 637

 Score =  705 bits (1820), Expect = 0.0,   Method: Composition-based stats.
 Identities = 303/645 (46%), Positives = 446/645 (69%), Gaps = 16/645 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +T PDGS++ +    T + +A SI   LA+ AVA  +NGK+ D  DP+  + +++II
Sbjct: 1   MLNITLPDGSVRQYESPVTVAQIAASIGVGLARAAVAGRVNGKLVDACDPIVEDSAVQII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TP+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A I
Sbjct: 61  TPKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M+E+IA+D   +K      +A ++F+ + E YK+ +++ +P  E + +Y   E+ D+
Sbjct: 121 EARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLIDDMPEVEAMGMYHHQEYVDM 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+E
Sbjct: 181 CRGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKAYIQRIEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL +++DLFH+ ++  G++FWH KGW ++Q +  +MR+++    Y+E+ TPQ++D
Sbjct: 240 KRDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           +  W++SGHW++Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+R
Sbjct: 300 KTFWEKSGHWENYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF 
Sbjct: 354 LAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFH 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + VKLS RPE+R GSD +WD AE  ++  L          +  G L GEGAFYGPK EY
Sbjct: 414 DVSVKLSLRPEQRAGSDDVWDKAEQGLREALTACG------VEWGELPGEGAFYGPKIEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            ++DA+GR WQCGT+Q+DF LP R +A YV  ++++  PVM+HRA+ GS+ERFIGI+IEN
Sbjct: 468 HVRDALGRSWQCGTLQLDFVLPERLDAEYVTENNDRARPVMLHRAILGSLERFIGILIEN 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G+ PLWL+P+Q ++  IT +  +Y +E+A  L++    +E D RNE I YKIR++S  
Sbjct: 528 YAGSFPLWLAPVQLVIMNITENQADYCREVAAKLQAAGFRVELDLRNEKIGYKIRDNSQY 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           + P  I+ GDKE  E  + +R   +     + L D I  L +E  
Sbjct: 588 RFPYQIVVGDKEKQENKVAVR-RKAEDLGSLDLDDFIAQLQQEIT 631


>gi|145589014|ref|YP_001155611.1| threonyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|189083617|sp|A4SX33|SYT_POLSQ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|145047420|gb|ABP34047.1| Ser-tRNA(Thr) hydrolase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
          Length = 640

 Score =  705 bits (1820), Expect = 0.0,   Method: Composition-based stats.
 Identities = 319/646 (49%), Positives = 449/646 (69%), Gaps = 18/646 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP    +T PDGS + +      +DVA+SI   LAK A+   ++G++ D S  + ++  +
Sbjct: 1   MPV---VTLPDGSKREYEAPVRVADVAQSIGSGLAKAALGGIVDGQMVDTSFVIDKDSHL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT + P +L ++RHS AH++A AV+ ++PE QV IGP+IE+GFYYDF   +PF+ D+L
Sbjct: 58  AIITDKSPEALEIVRHSTAHLLAYAVKELFPEAQVTIGPVIENGFYYDFSYHRPFTPDDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             +EKKM E+  +D P ++  +  ++A E F+ + E YK E++ SIP  E+V+LY +G++
Sbjct: 118 VALEKKMTELAKKDEPVVRTVMPRDEAVEFFKQQGENYKAELIASIPQGEDVSLYAEGKF 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV STG++K F KLMK+AGAYWRGDS   ML RIYGTAW  +++   YL+ LE
Sbjct: 178 TDLCRGPHVPSTGKLKVF-KLMKLAGAYWRGDSKNEMLQRIYGTAWLRKEDQDAYLHMLE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           ESEKRDHR+L +++DLFH  E+  G+IFWH KGW I+Q +  YMRR  + + Y+E+  PQ
Sbjct: 237 ESEKRDHRRLGKQLDLFHFQEEAPGLIFWHPKGWSIWQEVEQYMRRVYQNEGYQEVKAPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +LD+ LW++SGHWD+Y+ NMF       T  + R +ALKPMNCPGHV ++N GL SYREL
Sbjct: 297 ILDRGLWEKSGHWDNYKENMFT------TESENRAYALKPMNCPGHVQIYNSGLHSYREL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R  EFG  +RNEPSG+LHGLMRVRGFTQDD H+FCT++Q+ +E       + ++Y+DF
Sbjct: 351 PLRFGEFGQCHRNEPSGALHGLMRVRGFTQDDGHIFCTEDQIQSEVAAFDKAVRAVYQDF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF ++ VKL+ RP KRVG DA+WD AE+ ++G L       ++      L GEGAFYGPK
Sbjct: 411 GFTEVAVKLALRPAKRVGDDAIWDKAEDALRGALKASGQEWEE------LPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            EY LKD+IGR WQCGTIQVDF++P+R  A YV   + +  PVM+HRA+ GS+ERFIGI+
Sbjct: 465 IEYHLKDSIGRTWQCGTIQVDFSMPARLGAEYVAEDNSRKTPVMLHRAIVGSLERFIGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IEN  GN+P+WL+P QA+V  I+ ++  YAQ++   LK     +E+D RNE I YKIREH
Sbjct: 525 IENHAGNMPVWLAPTQAVVLNISGNSAAYAQKVQQSLKKQGFRVESDLRNEKITYKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +++KIP +++ GDKE+   ++ +R  G      + L   +  L ++
Sbjct: 585 ALQKIPFLLVVGDKESESNTVAVRARGGVDLGVMPLDAFVARLQQD 630


>gi|257095791|ref|YP_003169432.1| threonyl-tRNA synthetase [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
 gi|257048315|gb|ACV37503.1| threonyl-tRNA synthetase [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
          Length = 641

 Score =  705 bits (1820), Expect = 0.0,   Method: Composition-based stats.
 Identities = 325/650 (50%), Positives = 438/650 (67%), Gaps = 17/650 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP    +T PDGS +N+P   + + +A  I   LA+ A+A  + G++ D +  + R+ S+
Sbjct: 1   MP---IITLPDGSQRNYPHPLSVAQLATDIGPGLARAALAGRVAGRLVDTAFILDRDASL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            +IT  DP  L ++RHSCAH++A AV+ ++P  QV IGP+IEDGF+YDF  E+PF+ D+L
Sbjct: 58  SLITARDPEGLEILRHSCAHLLAMAVKQLYPSAQVTIGPVIEDGFFYDFAFERPFTPDDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IE +MQE+ A D P  ++ L  ++A   FE   E+YK E++ +IP  E ++LY QG++
Sbjct: 118 VEIEARMQELAAADLPLGRRELPRDQAVAYFEQLGESYKAELIRAIPEGETLSLYAQGDF 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV STG+++ F KL KVAGAYWRGD+   ML RIYGT W   + L  YL  LE
Sbjct: 178 ADLCRGPHVPSTGRLQAF-KLTKVAGAYWRGDARNAMLQRIYGTCWPDAKALKAYLTRLE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQ 298
           E+ KRDHRKL  ++DLFH  +   G +FWH KGW +FQ LI YMR R+ + DY E+NTP 
Sbjct: 237 EAGKRDHRKLGAQLDLFHFDDCAPGSVFWHPKGWALFQQLIGYMRTRQERADYVEVNTPD 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW+ SGHW +YR  MF       T +D R FALKPMNCPG V++F   LKSYR+L
Sbjct: 297 VMDRGLWETSGHWFNYREAMFTT-----TTEDERVFALKPMNCPGAVSLFAQRLKSYRDL 351

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG V+R EPSGSLHGL+RVR FTQDDAH+FCT  QM +EC     L+ +IY+DF
Sbjct: 352 PLRMAEFGKVHRYEPSGSLHGLLRVRHFTQDDAHIFCTAAQMQDECASTIALVFAIYRDF 411

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+ + VKLSTRP  R+GSD  WD  E  + G LD +       I   +  GEGAFYGPK
Sbjct: 412 GFDDVAVKLSTRPANRIGSDETWDQLEGALSGALDRMG------IECRINPGEGAFYGPK 465

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E++L+DAIGRDWQCGT+QVD NLP RF+  Y+N   E+  PVM+HRA+FGS+ERF GI+
Sbjct: 466 LEFVLRDAIGRDWQCGTLQVDLNLPERFDISYINERGERERPVMLHRALFGSLERFTGIL 525

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE++ G  PLWL+P QA+V  I+    +YA+ +   LK   +    D RNE I YKIRE+
Sbjct: 526 IEHYSGLFPLWLAPQQAVVLNISEGQSDYAKSVLQALKRVGVRATVDLRNEKIGYKIREY 585

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
           S++K+P +++ GD E +E  + +R         + L D I  L +E+ PP
Sbjct: 586 SLQKVPYLLVVGDMEKAEGRVALRARAGEDLGSLPLADVIARLREEARPP 635


>gi|297250596|ref|ZP_06864620.2| threonine--tRNA ligase [Neisseria polysaccharea ATCC 43768]
 gi|296838509|gb|EFH22447.1| threonine--tRNA ligase [Neisseria polysaccharea ATCC 43768]
          Length = 648

 Score =  705 bits (1820), Expect = 0.0,   Method: Composition-based stats.
 Identities = 305/645 (47%), Positives = 445/645 (68%), Gaps = 16/645 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +T PDGS++ +    T + +A SI   LAK  VA  +NGK+ D  DP+  + +++II
Sbjct: 12  MLNITLPDGSVRQYESPVTVAQIAASIGAGLAKATVAGKVNGKLVDACDPIVEDSAVQII 71

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TP+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A I
Sbjct: 72  TPKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAI 131

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M+E+IA+D   +K      +A ++F+ + E YK+ +++ +P  E + +Y   E+ D+
Sbjct: 132 EARMKELIAQDYDVIKIMTPRAEAIKIFQERGEEYKLRLIDDMPEVEAMGMYHHQEYVDM 191

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+E
Sbjct: 192 CRGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKAYIQRIEEAE 250

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL +++DLFH+ ++  G++FWH KGW ++Q +  +MR+++    Y+E+ TPQ++D
Sbjct: 251 KRDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMD 310

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           +  W++SGHW++Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+R
Sbjct: 311 KTFWEKSGHWENYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMR 364

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF 
Sbjct: 365 LAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFH 424

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + VKLS RPEKR GSD +WD AE  ++  L          +  G L GEGAFYGPK EY
Sbjct: 425 DVSVKLSLRPEKRAGSDDVWDKAEQGLREALTACG------VEWGELPGEGAFYGPKIEY 478

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+GR WQCGT+Q+DF LP R NA YV  ++++  PVM+HRA+ GS+ERFIGI+IEN
Sbjct: 479 HVKDALGRSWQCGTLQLDFVLPERLNAEYVTENNDRARPVMLHRAILGSLERFIGILIEN 538

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G+ PLWL+PIQ ++  IT +  +Y +E+A  L++    +E D RNE I YKIR++S  
Sbjct: 539 HAGSFPLWLAPIQMVIMNITENQADYCREVAAKLQAAGFRVELDLRNEKIGYKIRDNSQY 598

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           + P  I+ GDKE  E  + +R   +     +++ D +  L +E  
Sbjct: 599 RFPYQIVVGDKEKQENKVAVR-RKAEDLGSLNVDDFVAQLQQEIT 642


>gi|125973743|ref|YP_001037653.1| threonyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|256005747|ref|ZP_05430701.1| threonyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|281417900|ref|ZP_06248920.1| threonyl-tRNA synthetase [Clostridium thermocellum JW20]
 gi|166223337|sp|A3DET1|SYT_CLOTH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|125713968|gb|ABN52460.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Clostridium
           thermocellum ATCC 27405]
 gi|255990281|gb|EEU00409.1| threonyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|281409302|gb|EFB39560.1| threonyl-tRNA synthetase [Clostridium thermocellum JW20]
 gi|316940063|gb|ADU74097.1| threonyl-tRNA synthetase [Clostridium thermocellum DSM 1313]
          Length = 635

 Score =  705 bits (1818), Expect = 0.0,   Method: Composition-based stats.
 Identities = 292/642 (45%), Positives = 417/642 (64%), Gaps = 16/642 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            IK+T  DGS++ +    T  +VAESIS  LA+ A+A  +NG+V DLS P+  + ++ ++
Sbjct: 1   MIKITLKDGSVREYNEGITIKEVAESISAGLARVALAGEVNGEVKDLSYPLENDCTLNLL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D       RH+ +HI+A+AV+ ++P+ ++AIGP IE+GFYYDFD E+PFS ++L +I
Sbjct: 61  TFDDEGGRDAYRHTTSHILAQAVKRLYPDAKLAIGPAIENGFYYDFDVEKPFSVEDLEKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E++M++II  D    +  L  E+A +  E + E YKVE++  +P  E ++ Y+QG++ DL
Sbjct: 121 EEEMKKIIKEDYKLERFTLPREEAIKFMEERNEPYKVELIRDLPEGETISFYKQGDFVDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPH+ STG+VK F KLM VAGAYWRG+    ML RIYGT++  + +L  Y+  +EE++
Sbjct: 181 CAGPHIESTGKVKAF-KLMSVAGAYWRGNEKNKMLQRIYGTSFTKKSDLDAYITRIEEAK 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD 301
           KRDHRKL RE+DLF I E+G G  F+  KG  +   L  Y R + +   Y+EI TP +L+
Sbjct: 240 KRDHRKLGRELDLFDIYEEGPGFPFFMPKGMVLRNVLEEYWREEHRKAGYQEIKTPIILN 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW +SGHWD Y+ NM+  K       D   FA+KPMNCPG + V+   L SYR+LP R
Sbjct: 300 EELWHRSGHWDHYKENMYFTKI------DEADFAIKPMNCPGGMLVYKRKLHSYRDLPQR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAE G V+R+E SG LHGLMRVR FTQDDAH+F T +Q+ +E L + +LI   YK FGF+
Sbjct: 354 LAELGLVHRHELSGVLHGLMRVRCFTQDDAHIFMTPDQIESEILGVISLIDDFYKVFGFK 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPE  +GSD  W+ A N +K  L+      +  I+  +  G+GAFYGPK ++
Sbjct: 414 YH-VELSTRPENSMGSDEDWERATNALKNALE------KKGIDYKINEGDGAFYGPKIDF 466

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L+D+IGR WQCGTIQ+DF +P RF+  Y+    EK  PVMIHR VFGSIERFI I+ E+
Sbjct: 467 HLEDSIGRTWQCGTIQLDFQMPERFDLTYIGPDGEKHRPVMIHRVVFGSIERFIAILTEH 526

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  P+WLSP+Q  +  I     +Y  E+   L+   + +E D RNE I YKIRE  ++
Sbjct: 527 YAGAFPVWLSPVQVKILPILEKQHDYVAEVKKALEEKGVRVEADLRNEKIGYKIREAQLE 586

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           K+P +++ GDKE   R++ +R         + L D +  + +
Sbjct: 587 KVPYMLVIGDKEMENRTVAVRSRKDGDLGPMRLEDFVNRIVE 628


>gi|325265785|ref|ZP_08132472.1| threonine--tRNA ligase [Kingella denitrificans ATCC 33394]
 gi|324982768|gb|EGC18393.1| threonine--tRNA ligase [Kingella denitrificans ATCC 33394]
          Length = 637

 Score =  705 bits (1818), Expect = 0.0,   Method: Composition-based stats.
 Identities = 301/643 (46%), Positives = 432/643 (67%), Gaps = 16/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +T PDGSI+ +    T + +A SI   LAK  VA  +NG + D  DP+  + +++II
Sbjct: 1   MLNITLPDGSIRQYESPVTVAQIAASIGSGLAKATVAGKVNGVLRDACDPITEDAAVQII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TP+DP  + +IRHSCAH++  AV+ ++P  ++ IGP+IEDGFYYD   E+PF+ +++  I
Sbjct: 61  TPKDPEGVEIIRHSCAHLVGHAVKQLFPNAKMVIGPVIEDGFYYDIAAEKPFTPEDMKAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E++M+++I +D   +K+ L   +  E+F+ + E YK+ +++ +P    + +Y   E+ D+
Sbjct: 121 EERMKQLINQDYDVIKKMLPRAEVIEIFKQRGEDYKLRLVDDMPEVTEMGMYFHQEYVDM 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +T  +K F KL K++GAYWRGDSN   L RIYGTAW ++ EL  Y+  +EE+E
Sbjct: 181 CRGPHVPNTRFLKNF-KLTKMSGAYWRGDSNNEQLQRIYGTAWASKDELKAYITRIEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL R++DLFH+ ++  G++FWH +GW ++Q +  +MRR++    Y E+ TPQ++D
Sbjct: 240 KRDHRKLGRQLDLFHLQDEAPGMVFWHPRGWTLWQVIEQHMRRELDAAGYREVKTPQIMD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           +  W++SGHW +Y+ NMF       T  + R +A+KPMNCPGHV +FN+ L+SYR+LP+R
Sbjct: 300 KTFWEKSGHWANYKDNMFL------TASEKREYAVKPMNCPGHVQIFNNTLRSYRDLPMR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+  E  K + L++ IY+ FGFE
Sbjct: 354 LAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIAEETRKFNLLVMKIYQQFGFE 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + VKLS RPE+R GSD +WD AE  ++  L          +    L GEGAFYGPK EY
Sbjct: 414 HVSVKLSLRPEQRAGSDEIWDKAEQGLRDALTACG------VEWQELPGEGAFYGPKVEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+GR WQCGTIQ+DF LP R +A YV   + K  PVM+HRA+ GS+ERFIGI+IE 
Sbjct: 468 HIKDALGRSWQCGTIQLDFVLPERLDAEYVAEDNSKKRPVMLHRAILGSLERFIGILIEE 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G+ PLWL+P+Q +V  IT    +Y +E+   LK+     E D RNE I YKIR++S  
Sbjct: 528 HAGSFPLWLAPVQMVVMNITEKQADYCREVVEKLKAAGFRAEADLRNEKIGYKIRDNSQM 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           + P  I+ GDKE     + +R         + + D I +L KE
Sbjct: 588 RYPYQIVVGDKEMENGQVAVR-RKGEDLGSMKVEDFIALLQKE 629


>gi|58039289|ref|YP_191253.1| threonyl-tRNA synthetase [Gluconobacter oxydans 621H]
 gi|73919795|sp|Q5FSP9|SYT_GLUOX RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|58001703|gb|AAW60597.1| Threonyl-tRNA synthetase [Gluconobacter oxydans 621H]
          Length = 645

 Score =  704 bits (1817), Expect = 0.0,   Method: Composition-based stats.
 Identities = 335/654 (51%), Positives = 458/654 (70%), Gaps = 15/654 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP+   +T PDGS++ F    TG+ +A SI   LAK A+A+ ++GK  D+   +  + S+
Sbjct: 1   MPA---ITLPDGSVRTFDGTVTGTTIAASIGPGLAKAAMAMEVDGKPVDIGTEISSDASV 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           + IT +D  +L +IRH  AH++AEAVQS+WPE QV IGP I+DGFYYDF +E+PF+ ++ 
Sbjct: 58  KFITRKDEDALEMIRHDAAHVLAEAVQSLWPETQVTIGPSIKDGFYYDFSREKPFTPEDF 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IE KM+EI+A ++PF+++    + A   FE K E +K ++++ +P  E +++YRQGEW
Sbjct: 118 PAIEAKMREIVAANTPFVREVWDRDDAIRFFEEKGEDFKAQLIQDLPEDEQISIYRQGEW 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPH+R+TG V   FKLM+VAGAYWRGD   PML+RIYGTAW  ++EL  +L  LE
Sbjct: 178 LDLCRGPHLRTTGDVGTAFKLMRVAGAYWRGDHRNPMLTRIYGTAWRDKKELDAHLLRLE 237

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+EKRDHR++ REMDLFHI E+  G IFWHRKGW+++  L  YMRR + +++YEE+ TPQ
Sbjct: 238 EAEKRDHRRIGREMDLFHIQEEAVGQIFWHRKGWRLYTVLQDYMRRAQERNNYEEVRTPQ 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D+ LW+ SGHWD YR NMF     D+     +T ALKPMNCP HV +F HGL+SYREL
Sbjct: 298 LVDRALWEASGHWDKYRENMFIATVEDED----KTLALKPMNCPCHVQIFRHGLRSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG+ +R EPSG+LHG+MRVRGFTQDDAH+FCT +Q+ +E  K   ++  +Y D 
Sbjct: 354 PLRMAEFGACHRYEPSGALHGIMRVRGFTQDDAHIFCTDDQIADETAKFVKMLAEVYSDL 413

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+   VK S RPE R GSD +WD AE  +K   +         +      GEGAFYGPK
Sbjct: 414 GFDTFRVKFSDRPETRAGSDEVWDRAEGSLKKACEIAG------VEYEYNPGEGAFYGPK 467

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E++L DAIGRDWQCGT+QVD+ LP R +A Y+   S +  PVM+HRA+ GS ERFIGI+
Sbjct: 468 LEFVLTDAIGRDWQCGTLQVDYVLPERLDASYIGEDSNRHRPVMLHRAILGSFERFIGIL 527

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE + G  PLWL+P Q +V +I S A +YA E+A  LK+  L +ETD R++ IN KIREH
Sbjct: 528 IEQYAGKFPLWLAPTQVVVASIVSDAADYANEVAATLKAAGLQVETDTRSDKINAKIREH 587

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           S+ ++P+I++ G +EA ER + +RR G    + +SL DA+  L KE+  PD  +
Sbjct: 588 SLARVPVILVVGRREAEERKVAMRRLGGAAQEILSLDDAVAALAKEAQAPDIAR 641


>gi|284799642|ref|ZP_05984463.2| threonine--tRNA ligase [Neisseria subflava NJ9703]
 gi|284797591|gb|EFC52938.1| threonine--tRNA ligase [Neisseria subflava NJ9703]
          Length = 643

 Score =  704 bits (1816), Expect = 0.0,   Method: Composition-based stats.
 Identities = 303/647 (46%), Positives = 444/647 (68%), Gaps = 16/647 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEII 62
            + +T PDGS++ +    T + +A SI   LAK  VA  +NGK+ D  DP+ E + ++II
Sbjct: 7   MLNITLPDGSVRQYESPVTVAQIAASIGAGLAKATVAGKVNGKLVDACDPITEDAHVQII 66

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TP+D   + +IRHSCAH++  AV+ ++P+ ++ IGP+IEDGFYYD   E+PF+ D++A I
Sbjct: 67  TPKDKEGVEIIRHSCAHLVGHAVKQLYPDAKMVIGPVIEDGFYYDIATEKPFTPDDVAAI 126

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M+E+IA+D   +K      +  ++F+ + E YK+ ++E +P  E + +Y   E+ D+
Sbjct: 127 EARMKELIAQDYDVIKVMTPRAETVKIFQDRGEEYKLRLIEDMPEVEAMGMYHHQEYVDM 186

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +T  +K F KL K+AGAYWRGDSN  ML R+YGTAW ++ EL  Y+  +EE+E
Sbjct: 187 CRGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRVYGTAWASKDELKAYIQRIEEAE 245

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL +++DLFH+ ++  G++FWH KGW ++Q +  +MR+++    Y+E+ TPQ++D
Sbjct: 246 KRDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMD 305

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           +  W++SGHW++Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+R
Sbjct: 306 KTFWEKSGHWENYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMR 359

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFGS +RNEPSG+LHGLMRVRGF QDDAH+FC ++Q+ +E    + L++ IYK FGF 
Sbjct: 360 LAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCAEDQIVDEARAFNELLVRIYKQFGFH 419

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + VKLS RPE+R GSD +WD AE  ++  L          +    L GEGAFYGPK EY
Sbjct: 420 DVAVKLSLRPEQRAGSDEVWDKAEQGLRDALTACG------VEWEELPGEGAFYGPKIEY 473

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+GR WQCGT+Q+DF LP R NA YV  ++++  PVM+HRA+ GS+ERFIGI+IEN
Sbjct: 474 HVKDALGRSWQCGTLQLDFVLPERLNAEYVTENNDRARPVMLHRAILGSLERFIGILIEN 533

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G+ PLWL+P+Q ++  IT +  +Y +E+A  L++    +E D RNE I YKIR++S  
Sbjct: 534 HAGSFPLWLAPVQMVIMNITENQADYCREVAAKLQAAGFRVELDLRNEKIGYKIRDNSQY 593

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
           + P  I+ GDKE  E  + +R   +     +++ D I  L +E+   
Sbjct: 594 RFPYQIVVGDKEKQENKVAVR-RKAEDLGSLNVDDFIAQLQQETTAA 639


>gi|121634517|ref|YP_974762.1| threonyl-tRNA synthetase [Neisseria meningitidis FAM18]
 gi|120866223|emb|CAM09963.1| putative threonyl-tRNA synthetase [Neisseria meningitidis FAM18]
 gi|325131827|gb|EGC54527.1| threonyl-tRNA synthetase [Neisseria meningitidis M6190]
          Length = 648

 Score =  704 bits (1816), Expect = 0.0,   Method: Composition-based stats.
 Identities = 304/645 (47%), Positives = 442/645 (68%), Gaps = 16/645 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +T PDGS++ +    T + +A SI   LA+ AVA  +NGK+ D  DP+    +++II
Sbjct: 12  MLNITLPDGSVRQYESPVTVAQIAASIGVGLARAAVAGRVNGKLVDACDPIVENSAVQII 71

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TP+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A I
Sbjct: 72  TPKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAI 131

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M+E+IA+D   +K      +A ++F+ + E YK+ +++ +P  E + +Y   E+ D+
Sbjct: 132 EARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLIDDMPEVEAMGMYHHQEYVDM 191

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+E
Sbjct: 192 CRGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKAYIQRIEEAE 250

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL +++DLFH+ ++  G++FWH KGW ++Q +  +MR+++    Y+E+ TPQ++D
Sbjct: 251 KRDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMD 310

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           +  W++SGHWD+Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+R
Sbjct: 311 KTFWEKSGHWDNYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMR 364

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF 
Sbjct: 365 LAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFH 424

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + VKLS RPE+R GSD +WD AE  ++  L          +    L GEGAFYGPK EY
Sbjct: 425 DVAVKLSLRPEQRAGSDEVWDKAEQGLRDALTACG------VEWEELPGEGAFYGPKIEY 478

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+GR WQCGT+Q+DF LP R +A YV  ++++  PVM+HRA+ GS+ERFIGI+IEN
Sbjct: 479 HVKDALGRSWQCGTLQLDFVLPERLDAEYVTENNDRARPVMLHRAILGSLERFIGILIEN 538

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G+ PLWL+P+Q ++  IT +  +Y +E+A  L++     E D RNE I YKIR++S  
Sbjct: 539 HAGSFPLWLAPVQMVIMNITENQADYCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQY 598

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           + P  I+ GDKE  E  + +R   +     + L D I  L +E  
Sbjct: 599 RFPYQIVVGDKEKQENKVAVR-RKAEDLGSLDLDDFIAQLQQEIT 642


>gi|53805116|ref|YP_113204.1| threonyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
 gi|73919805|sp|Q60AZ3|SYT_METCA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|53758877|gb|AAU93168.1| threonyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
          Length = 638

 Score =  704 bits (1816), Expect = 0.0,   Method: Composition-based stats.
 Identities = 313/649 (48%), Positives = 439/649 (67%), Gaps = 18/649 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS + F    T   VAE+I   LAK A+A  ++G++ DLS  +  +  +
Sbjct: 1   MPV---VTLPDGSRREFDHPVTLLQVAEAIGPGLAKAALAGRVDGRLVDLSHRIEADAEV 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            ++T  D   + VIRHS AH++A+AV++++P+ QV IGP+I+DGFYYDF  E+PF+ ++L
Sbjct: 58  ALVTARDADGVEVIRHSTAHLLAQAVKALYPKAQVTIGPVIQDGFYYDFSYERPFTPEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IE KM E+ A+  P  ++ +  E+A   F S  EAYK EI+E+IP  E ++LY QG++
Sbjct: 118 EAIEAKMHELAAQALPVERRTMPREEAIAYFRSLGEAYKAEIIEAIPRGEVISLYSQGDF 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV  TG++  F KLMK+AGAYWRGDS   ML RIYGTAW  +++L  YL  LE
Sbjct: 178 TDLCRGPHVPDTGRLNAF-KLMKIAGAYWRGDSRNEMLQRIYGTAWGDRKDLAAYLQRLE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+E+RDHRKL + +DLFH+ E+  G++FWH KGW ++Q +  YMRR  + + Y+EI TP 
Sbjct: 237 EAERRDHRKLGKALDLFHMQEEAPGMVFWHPKGWILWQEIEQYMRRVFRDNGYQEIRTPL 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+ + LW++SGHW+ +   MF       T  + R +A+KPMNCP HV V+N GLKSYR+L
Sbjct: 297 VVARTLWERSGHWEKFSDEMFT------TASEERDYAIKPMNCPCHVQVYNQGLKSYRDL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFGS +RNE SG+LHGLMRVRGFTQDDAH+FCT+EQ+ +E  +  +L+  +Y DF
Sbjct: 351 PLRLAEFGSCHRNELSGALHGLMRVRGFTQDDAHIFCTEEQIQDEVSRFIDLLFKVYADF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF ++ +KLSTRPEKRVGSD +WD AE+ ++  L+         +   +  GEGAFYGPK
Sbjct: 411 GFSEVQIKLSTRPEKRVGSDEVWDKAEHALETALNA------KGLAWDLQPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD + R WQCGTIQVDF++P R  A YV     +  PVM+HRA+ GS+ERF+GI+
Sbjct: 465 IEFSLKDCLDRVWQCGTIQVDFSMPDRLGATYVAEDGARHVPVMLHRAILGSLERFVGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
            E++ G  PLWL+P+QA+V  IT    +YA+E+A    S    +  D RNE + +KIREH
Sbjct: 525 TEHYAGQYPLWLAPVQAVVLNITDRQADYAREVAQEFVSKGFRVIADLRNEKVGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLP 647
           S++++P ++I GDKE    S+ +R           + D +   T+E++ 
Sbjct: 585 SMQRVPYLLIVGDKEVEAGSVSLRTRDGKDHGSFGIGDLVAKFTEETMK 633


>gi|269214426|ref|ZP_05986526.2| threonine--tRNA ligase [Neisseria lactamica ATCC 23970]
 gi|269209844|gb|EEZ76299.1| threonine--tRNA ligase [Neisseria lactamica ATCC 23970]
          Length = 643

 Score =  704 bits (1816), Expect = 0.0,   Method: Composition-based stats.
 Identities = 304/643 (47%), Positives = 443/643 (68%), Gaps = 16/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +T PDGS++ +    T + +A S+   LAK AVA  +NGK+ D  DP+  + +++II
Sbjct: 7   MLNITLPDGSVRQYESPVTVAQIAASVGAGLAKAAVAGKVNGKLVDACDPITEDSTVQII 66

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TP+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A I
Sbjct: 67  TPKDREGVEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAI 126

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M+E+IA+D   +K      +A ++F+ + E YK+ +++ +P  E + +Y   E+ D+
Sbjct: 127 EARMKELIAQDYDVIKIMTPRAEAVKIFQDRGEEYKLRLIDDMPEVEAMGMYHHQEYVDM 186

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+E
Sbjct: 187 CRGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKAYIRRIEEAE 245

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL +++DLFH+ ++  G++FWH KGW ++Q +  +MR+++    Y+E+ TPQ++D
Sbjct: 246 KRDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQAVEQHMRKELNAAGYKEVKTPQIMD 305

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           +  W++SGHW++Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+R
Sbjct: 306 KTFWEKSGHWENYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMR 359

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF 
Sbjct: 360 LAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFH 419

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + VKLS RP KR GSD +WD AE  ++  L          +    L GEGAFYGPK EY
Sbjct: 420 DVSVKLSLRPGKRAGSDEVWDKAEQGLREALTACG------VEWEELPGEGAFYGPKIEY 473

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+GR WQCGT+Q+DF LP R NA YV  ++++  PVM+HRA+ GS+ERFIGI+IEN
Sbjct: 474 HVKDALGRSWQCGTLQLDFVLPERLNAEYVTENNDRARPVMLHRAILGSLERFIGILIEN 533

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G+ PLWL+P+Q ++  IT +  +Y +E+A  L++    +E D RNE I YKIR++S  
Sbjct: 534 HAGSFPLWLAPVQMVIMNITENQADYCREVAARLQAAGFRVELDLRNEKIGYKIRDNSQY 593

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           + P  I+ GDKE  E  + +R   +     + L D I  L +E
Sbjct: 594 RFPYQIVVGDKEKQENKVAVR-RKAEDLGSLDLDDFIAQLQQE 635


>gi|258543038|ref|YP_003188471.1| threonyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01]
 gi|256634116|dbj|BAI00092.1| threonyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01]
 gi|256637176|dbj|BAI03145.1| threonyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-03]
 gi|256640228|dbj|BAI06190.1| threonyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-07]
 gi|256643285|dbj|BAI09240.1| threonyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-22]
 gi|256646340|dbj|BAI12288.1| threonyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-26]
 gi|256649393|dbj|BAI15334.1| threonyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-32]
 gi|256652379|dbj|BAI18313.1| threonyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01-42C]
 gi|256655437|dbj|BAI21364.1| threonyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-12]
          Length = 645

 Score =  703 bits (1815), Expect = 0.0,   Method: Composition-based stats.
 Identities = 328/654 (50%), Positives = 463/654 (70%), Gaps = 15/654 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP+   +T PDGS+++F    TG+ VAE+I   LAK A+A+ ++GK+CD+   + ++ ++
Sbjct: 3   MPA---ITLPDGSVRSFDGPVTGTTVAEAIGPGLAKAALAMEVDGKLCDIRQTINKDAAL 59

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
             IT +DP SL +IRH  AH++AEAVQ+++P  QV IGP IE+GFYYDF + +PFS ++ 
Sbjct: 60  RFITRKDPESLELIRHDAAHVLAEAVQALYPGTQVTIGPSIENGFYYDFYRSEPFSPEDF 119

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A IE KM+EI+A+  PF+++    + A   FE + E +K E++  +P  E +++YRQGEW
Sbjct: 120 AAIEAKMREIVAKAEPFVREVWKRDDAIRFFEERGEKFKAELIRDLPEDEEISIYRQGEW 179

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPH+R+T  V   FKLMKVAGAYWRGD   PML+R+YGTAW  Q+EL  +L+ LE
Sbjct: 180 LDLCRGPHLRTTKDVGTAFKLMKVAGAYWRGDHRNPMLTRVYGTAWRDQKELDAHLHQLE 239

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+EKRDHR++ +EM LFH  E+  G +FWH KGW+++  L  YMRR + +  Y+E+ TPQ
Sbjct: 240 EAEKRDHRRIGKEMGLFHFQEEAVGQVFWHAKGWRLYTALQDYMRRAQTRHGYQEVRTPQ 299

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D+ LW+ SGHWD YR +MF     D    + +T ALKPMNCP HV +F HGL+SYREL
Sbjct: 300 LVDRALWEASGHWDKYRHHMFIATVED----ENKTLALKPMNCPCHVQIFRHGLRSYREL 355

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG+ +R EPSG+LHGLMRVRGFTQDDAH+FCT++Q+ +E ++   ++  +Y+D 
Sbjct: 356 PLRMAEFGACHRYEPSGALHGLMRVRGFTQDDAHIFCTEDQIADETVRFVKMLHDVYQDL 415

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE + VK + RPE+R GSD +WD AEN +K         +   +      GEGAFYGPK
Sbjct: 416 GFEHVRVKFADRPEQRAGSDEVWDKAENALKEA------CTVAGVEYEHNPGEGAFYGPK 469

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E++L+DAIGRDWQCGT+QVD  LP R +A Y+   S +  PVM+HRA+ GS ERF+GI+
Sbjct: 470 LEFVLRDAIGRDWQCGTLQVDLVLPERLDASYIGEDSGRHRPVMLHRAILGSFERFLGIL 529

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE   G  PLWL+P+Q +V +I S A  YA+E+A  L+   L++E D RN+ IN K+REH
Sbjct: 530 IEQHAGRFPLWLAPVQVVVASIVSDAAPYAEEVAAALREAGLAVEADVRNDKINAKVREH 589

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           S+ ++P+I++ G +EA ER++ +RR G+   + +SL DA+  L  E+ PPD +K
Sbjct: 590 SVARVPVILVVGRREAEERTVAMRRLGTQVQETLSLDDAVARLKNEATPPDLRK 643


>gi|319637847|ref|ZP_07992613.1| threonyl-tRNA synthetase [Neisseria mucosa C102]
 gi|317401002|gb|EFV81657.1| threonyl-tRNA synthetase [Neisseria mucosa C102]
          Length = 637

 Score =  703 bits (1815), Expect = 0.0,   Method: Composition-based stats.
 Identities = 305/645 (47%), Positives = 444/645 (68%), Gaps = 16/645 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEII 62
            + +T PDGS++ +    T + +A SI   LAK  VA  +NGK+ D  DP+ E + ++II
Sbjct: 1   MLNITLPDGSVRQYESPVTVAQIAASIGAGLAKATVAGKVNGKLVDACDPITEDAHVQII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TP+D   + +IRHSCAH++  AV+ ++P+ ++ IGP+IEDGFYYD   E+PF+ D++A I
Sbjct: 61  TPKDKEGVEIIRHSCAHLVGHAVKQLYPDAKMVIGPVIEDGFYYDIATEKPFTPDDVAAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M+E+IA+D   +K      +  ++F+ + E YK+ ++E +P  E + +Y   E+ D+
Sbjct: 121 EARMKELIAQDYDVVKVMTPRAETIKIFQDRGEEYKLRLIEDMPEVEAMGMYHHQEYVDM 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW ++ EL  Y+  +EE+E
Sbjct: 181 CRGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWASKDELKAYIQRIEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL +++DLFH+ ++  G++FWH KGW ++Q +  +MR+++    Y+E+ TPQ++D
Sbjct: 240 KRDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           +  W++SGHW++Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+R
Sbjct: 300 KTFWEKSGHWENYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF 
Sbjct: 354 LAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVDEARAFNELLVRIYKQFGFH 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + VKLS RPE+R GSD +WD AE  ++  L          +    L GEGAFYGPK EY
Sbjct: 414 DVAVKLSLRPEQRAGSDEVWDKAEQGLRDALTACG------VEWEELPGEGAFYGPKIEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+GR WQCGT+Q+DF LP R NA YV  ++++  PVM+HRA+ GS+ERFIGI+IEN
Sbjct: 468 HVKDALGRSWQCGTLQLDFVLPERLNAEYVTENNDRARPVMLHRAILGSLERFIGILIEN 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G+ PLWL+P+Q ++  IT +  +Y +E+A  L++    +E D RNE I YKIR++S  
Sbjct: 528 HAGSFPLWLAPVQMVIMNITENQADYCREVAAKLQAAGFRVELDLRNEKIGYKIRDNSQY 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           + P  I+ GDKE  E  + +R   +     +++ D I  L +E  
Sbjct: 588 RFPYQIVVGDKEKQENKVAVR-RKAEDLGSLNVDDFIAQLQQEIT 631


>gi|325137877|gb|EGC60452.1| threonyl-tRNA synthetase [Neisseria meningitidis ES14902]
          Length = 637

 Score =  703 bits (1815), Expect = 0.0,   Method: Composition-based stats.
 Identities = 304/645 (47%), Positives = 442/645 (68%), Gaps = 16/645 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +T PDGS++ +    T + +A SI   LA+ AVA  +NGK+ D  DP+    +++II
Sbjct: 1   MLNITLPDGSVRQYESPVTVAQIAASIGVGLARAAVAGRVNGKLVDACDPIVENSAVQII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TP+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A I
Sbjct: 61  TPKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M+E+IA+D   +K      +A ++F+ + E YK+ +++ +P  E + +Y   E+ D+
Sbjct: 121 EARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLIDDMPEVEAMGMYHHQEYVDM 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+E
Sbjct: 181 CRGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKAYIQRIEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL +++DLFH+ ++  G++FWH KGW ++Q +  +MR+++    Y+E+ TPQ++D
Sbjct: 240 KRDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           +  W++SGHWD+Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+R
Sbjct: 300 KTFWEKSGHWDNYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF 
Sbjct: 354 LAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFH 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + VKLS RPE+R GSD +WD AE  ++  L          +    L GEGAFYGPK EY
Sbjct: 414 DVAVKLSLRPEQRAGSDEVWDKAEQGLRDALTACG------VEWEELPGEGAFYGPKIEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+GR WQCGT+Q+DF LP R +A YV  ++++  PVM+HRA+ GS+ERFIGI+IEN
Sbjct: 468 HVKDALGRSWQCGTLQLDFVLPERLDAEYVTENNDRARPVMLHRAILGSLERFIGILIEN 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G+ PLWL+P+Q ++  IT +  +Y +E+A  L++     E D RNE I YKIR++S  
Sbjct: 528 HAGSFPLWLAPVQMVIMNITENQADYCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQY 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           + P  I+ GDKE  E  + +R   +     + L D I  L +E  
Sbjct: 588 RFPYQIVVGDKEKQENKVAVR-RKAEDLGSLDLDDFIAQLQQEIT 631


>gi|115524346|ref|YP_781257.1| threonyl-tRNA synthetase [Rhodopseudomonas palustris BisA53]
 gi|115518293|gb|ABJ06277.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase
           [Rhodopseudomonas palustris BisA53]
          Length = 679

 Score =  703 bits (1814), Expect = 0.0,   Method: Composition-based stats.
 Identities = 376/650 (57%), Positives = 492/650 (75%), Gaps = 1/650 (0%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            I +TFPDG  + +P   TG ++A+ IS SLAK+ V +A++G + DL+DP+  +  I+ +
Sbjct: 26  QIIVTFPDGKTREYPRGTTGLEIAKGISPSLAKRTVVMALDGVLTDLADPIEQDSKIDFV 85

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
             +D R+L +IRH  AH++AEAVQ++WP  QV IGP IE+GFYYDF + +PF+ ++ A I
Sbjct: 86  ARDDARALELIRHDAAHVLAEAVQTLWPGTQVTIGPTIENGFYYDFFRNEPFTPEDFAAI 145

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EKKM+EIIARD PF K     EK +++F  K E +KVE++++IP  + + +Y QGEWFDL
Sbjct: 146 EKKMREIIARDKPFTKDVWDREKTKQVFRDKGELFKVELVDAIPGNDPIKIYNQGEWFDL 205

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ STG++   FKLMKVAGAYWRGDSN PML+RIYGTA+  Q++L  YL  +EE+E
Sbjct: 206 CRGPHMTSTGKIGNAFKLMKVAGAYWRGDSNNPMLTRIYGTAFAKQEDLDAYLKQIEEAE 265

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQ 302
           KRDHRKL RE+DLFH  E+G GV+FWH KGW IFQ LI+YMRR++  DY+E+N PQ+LD+
Sbjct: 266 KRDHRKLGRELDLFHFQEEGPGVVFWHAKGWTIFQALIAYMRRRLAGDYDEVNAPQILDK 325

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHWD YR NMFA + A D  +D R FALKPMNCPGH+ ++ HGLKSYR+LP+R+
Sbjct: 326 VLWETSGHWDWYRENMFAAQSAGDEAEDKRWFALKPMNCPGHIQIYKHGLKSYRDLPLRM 385

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFG V+R EPSG++HGLMRVRGFTQDDAHVFCT+ Q+  ECLKI+ LI+S Y DFGF  
Sbjct: 386 AEFGIVHRYEPSGAMHGLMRVRGFTQDDAHVFCTELQLAEECLKINELILSTYSDFGFGD 445

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+VKLSTRP+KRVG+D  WD AE +M  VL  I+ +S  RI T +  GEGAFYGPKFEY+
Sbjct: 446 IVVKLSTRPDKRVGTDESWDHAERVMATVLAEIEAASGGRIKTAINPGEGAFYGPKFEYV 505

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+DAIGRDWQCGT QVDFNLP RF AFY+++   K  P+M+HRA+ GS+ERF GI+IE+F
Sbjct: 506 LRDAIGRDWQCGTTQVDFNLPERFGAFYIDADGAKKTPIMVHRAICGSMERFTGILIEHF 565

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G+ PLWLSP+Q +VTTITS   +YA+ +A   +   L +E D RNE INYK+REHS+ K
Sbjct: 566 AGHFPLWLSPVQVMVTTITSEGDDYAKVVAAAARKAGLRVEIDLRNEKINYKVREHSLAK 625

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           IP +++ G KEA   S+ +RR GS     + L DA+  L +E++PPD ++
Sbjct: 626 IPAMLVVGKKEAETHSVSVRRLGSDGQTVLPLADALAALVEEAVPPDVKR 675


>gi|313668802|ref|YP_004049086.1| threonyl-tRNA synthetase [Neisseria lactamica ST-640]
 gi|313006264|emb|CBN87726.1| putative threonyl-tRNA synthetase [Neisseria lactamica 020-06]
          Length = 637

 Score =  703 bits (1814), Expect = 0.0,   Method: Composition-based stats.
 Identities = 306/643 (47%), Positives = 444/643 (69%), Gaps = 16/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +T PDGS++ +    T + +A S+   LAK AVA  +NGK+ D  DP+  + S++II
Sbjct: 1   MLNITLPDGSVRQYESPVTVAQIAASVGAGLAKAAVAGKVNGKLVDACDPITEDSSVQII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TP+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A I
Sbjct: 61  TPKDREGVEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M+E+IA+D   +K      +A ++F+ + E YK+ +++ +P  E + +Y   E+ D+
Sbjct: 121 EARMKELIAQDYDVIKIMTPRAEAVKIFQDRGEEYKLRLIDDMPEVEAMGMYHHQEYVDM 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+E
Sbjct: 181 CRGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKAYIRRIEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL +++DLFH+ ++  G++FWH KGW ++Q +  +MR+++    Y+E+ TPQ++D
Sbjct: 240 KRDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQAVEQHMRKELNAAGYKEVKTPQIMD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           +  W++SGHW++Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+R
Sbjct: 300 KTFWEKSGHWENYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF 
Sbjct: 354 LAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFH 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + VKLS RPEKR GSD +WD AE  ++  L          +    L GEGAFYGPK EY
Sbjct: 414 DVSVKLSLRPEKRAGSDEVWDKAEQGLREALTACG------VEWEELPGEGAFYGPKIEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+GR WQCGT+Q+DF LP R NA YV  ++++  PVM+HRA+ GS+ERFIGI+IEN
Sbjct: 468 HVKDALGRSWQCGTLQLDFVLPERLNAEYVTENNDRARPVMLHRAILGSLERFIGILIEN 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G+ PLWL+P+Q ++  IT +  +Y +E+A  L++    +E D RNE I YKIR++S  
Sbjct: 528 HAGSFPLWLAPVQMVIMNITENQADYCREVAARLQAAGFRVELDLRNEKIGYKIRDNSQY 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           + P  I+ GDKE  E  + +R   +     + L D I  L +E
Sbjct: 588 RFPYQIVVGDKEKQENKVAVR-RKAEDLGSLDLDDFIAQLQQE 629


>gi|293399557|ref|ZP_06643710.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae F62]
 gi|291610126|gb|EFF39248.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae F62]
          Length = 648

 Score =  703 bits (1814), Expect = 0.0,   Method: Composition-based stats.
 Identities = 306/645 (47%), Positives = 444/645 (68%), Gaps = 16/645 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +T PD S++ +    T + +A SI   LAK AVA  +NGK+ D  DP+  + +++II
Sbjct: 12  MLNITLPDCSVRQYESPVTVAQIAASIGAGLAKAAVAGKVNGKLVDACDPIVEDSAVQII 71

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TP+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A I
Sbjct: 72  TPKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAI 131

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M+E+IA+D   +K      +A ++F+ + E YK+ ++E +P  E + +Y   E+ D+
Sbjct: 132 EARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLIEDMPEVEAMGMYHHQEYVDM 191

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+E
Sbjct: 192 CRGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKDYIQRIEEAE 250

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL +++DLFH+ ++  G++FWH KGW +++T+  +MR+++    Y+E+ TPQ++D
Sbjct: 251 KRDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWRTIEQHMRKELNAAGYKEVKTPQIMD 310

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           +  W++SGHWD+Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+R
Sbjct: 311 KTFWEKSGHWDNYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMR 364

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF 
Sbjct: 365 LAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFH 424

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + V+LS RPEKR GSD +WD AE  ++  L          +  G L GEGAFYGPK EY
Sbjct: 425 DVSVRLSLRPEKRAGSDDVWDKAEQGLREALTACG------VEWGELPGEGAFYGPKIEY 478

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+GR WQCGT+Q+DF LP R +A YV  ++++  PVM+HRA+ GS+ERFIGI+IEN
Sbjct: 479 HVKDALGRSWQCGTLQLDFVLPERLDAEYVTENNDRARPVMLHRAILGSLERFIGILIEN 538

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G+ PLWL+P+Q ++  IT +  +Y +E+A  L++     E D RNE I YKIR++S  
Sbjct: 539 HAGSFPLWLAPVQMVIMNITENQADYCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQY 598

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           + P  I+ GDKE  E  + +R   +     + L D I  L +E  
Sbjct: 599 RFPYQIVIGDKEKQENKVAVR-RKAEDLGSLDLDDFIAQLQQEIT 642


>gi|121605747|ref|YP_983076.1| threonyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2]
 gi|166225475|sp|A1VR77|SYT_POLNA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|120594716|gb|ABM38155.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Polaromonas
           naphthalenivorans CJ2]
          Length = 635

 Score =  703 bits (1813), Expect = 0.0,   Method: Composition-based stats.
 Identities = 323/643 (50%), Positives = 444/643 (69%), Gaps = 15/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I++T PD S +++    T ++VA SI   LAK A+   ++GK+ D S  + ++ ++ I+
Sbjct: 1   MIQITLPDSSKRDYSGPVTVAEVAASIGTGLAKAALGGKVDGKLVDTSFLISQDSALSIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   L +IRHS AH++A AV+ ++PE QV IGP+IE+GF+YDF  ++PF+ ++L  I
Sbjct: 61  TAKDAEGLELIRHSAAHLLAYAVKELFPEAQVTIGPVIENGFFYDFSYKRPFTPEDLVAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M E++A+D P  ++ L  ++A   F+S  E YK EI+ SIPA E+V+LYR+G++ DL
Sbjct: 121 EKRMAELVAKDEPVTRRVLPRDEAVAYFKSLGEYYKAEIIASIPANEDVSLYREGKFEDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG++K FFKLMKVAGAYWRGD +  ML RIYGTAW T+ EL QYL  LEE++
Sbjct: 181 CRGPHVPSTGKLK-FFKLMKVAGAYWRGDHHNEMLQRIYGTAWATKDELQQYLTMLEEAD 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL +E+DLFHI +   G++FWH KGW ++Q +  YMR+  ++  Y+E+  PQ+LD
Sbjct: 240 KRDHRKLGKELDLFHIDDHSPGLVFWHPKGWTVWQGVEQYMRKVYQNNGYQEVKGPQLLD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+++GHWD YR NMF       T  + R FALKPMNCPGH+ +F  G+KSYR+LP+R
Sbjct: 300 KTLWEKTGHWDKYRDNMFT------TESEKRDFALKPMNCPGHILIFKQGIKSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
             EFG  +RNEP+G LHG+MRVRGFTQDD H+FCT+EQ+  EC+    L+  +Y DFGF+
Sbjct: 354 YGEFGQCHRNEPTGGLHGIMRVRGFTQDDGHIFCTEEQILKECVDYTTLLQKVYTDFGFK 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            I+ K++TRPE R+GSD  WD AE+ +   L              +  GEGAFYGPK EY
Sbjct: 414 NIIYKVATRPEARIGSDESWDKAEHALIESLRASGC------EFEISPGEGAFYGPKIEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            LKDAIGR WQCGTIQVDF++P R +A YV     +  PVM+HRA+ GS+ERFIGI+IE 
Sbjct: 468 TLKDAIGRQWQCGTIQVDFSMPERLDAEYVGEDGARHRPVMLHRAIVGSLERFIGILIEE 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G LP WL+P Q  V TIT S  EYA+ +A  L++  L +  D RNE I YKIREHS++
Sbjct: 528 HAGALPTWLAPEQVSVLTITDSQAEYARGVAKTLQNQGLRVNLDLRNEKITYKIREHSLQ 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K+P I++ GDKE +  ++ +R  G+     +SL      +  +
Sbjct: 588 KLPFILVVGDKEMAAGAVSVRARGNKDLGVMSLEAFAERIASD 630


>gi|332968643|gb|EGK07696.1| threonine--tRNA ligase [Psychrobacter sp. 1501(2011)]
          Length = 644

 Score =  703 bits (1813), Expect = 0.0,   Method: Composition-based stats.
 Identities = 304/642 (47%), Positives = 436/642 (67%), Gaps = 15/642 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            + +T PDGS+K F    T   VAESI   LAK  VA  ++GK+ D SDP+  +  +EI+
Sbjct: 1   MVAITLPDGSVKEFDGATTVMQVAESIGPGLAKATVAGRVDGKLVDASDPITHDAKVEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TP+D   + +IRHSCAH++  AV+ ++P+V++ IGP+IE+GFYYD   E PF+ D+++ I
Sbjct: 61  TPKDADGVDIIRHSCAHLLGHAVKQLYPDVKMVIGPVIEEGFYYDIFSETPFTPDDMSAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M E+I ++   +K+    ++A  +F+ + E YK++++  +  ++   LY   E+ D+
Sbjct: 121 EKRMAELIKQNYDVIKKMTPRDEAIRIFKERNEDYKLKLINDMLEEKEFGLYFHQEYVDM 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +T  +K F KL K++GAYWRGD+    L RIYGTAW  +++L  Y+  +EE+E
Sbjct: 181 CRGPHVPNTRFLKVF-KLTKMSGAYWRGDAKNEQLQRIYGTAWADKKDLQAYITRMEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KRDHRK+ R+++LFH+ E   G++FWH  GW I+Q L  YMR+ +  + Y+EI TPQ++D
Sbjct: 240 KRDHRKIGRQLNLFHMQEQSPGMVFWHPNGWTIYQVLEQYMRKVQKDNGYQEIKTPQIVD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW++SGHW +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYRELP+R
Sbjct: 300 RSLWEKSGHWGNYATNMFT------TSSESRDYAVKPMNCPCHVQVFNQGLKSYRELPIR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+ Q+  E      L + +YKDFGF+
Sbjct: 354 LAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTQAQIQEEVANFIKLTLDVYKDFGFD 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
           +I +KLSTRPEKRVG+D  WD AE  +   LD+        +    L GEGAFYGPK E+
Sbjct: 414 QIDMKLSTRPEKRVGTDESWDIAEKALAEALDSSG------LEWEYLPGEGAFYGPKIEF 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            LKD++GR WQCGTIQVD N+P R +A +VN ++E+  P+M+HRA+ GS ERF+G++IE+
Sbjct: 468 SLKDSLGRVWQCGTIQVDPNMPERLDAEFVNENNERETPIMLHRAILGSFERFLGMLIEH 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G +P+WL+P Q +V  IT    E  Q +   L++  L   +D RNE I +KIRE +++
Sbjct: 528 YAGWMPVWLAPQQVVVMNITDKQSEACQNVVAELQNAGLRAISDLRNEKIGFKIRERTLE 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +IP +++ GDKE     + +R         +S+ D I ++ K
Sbjct: 588 RIPYMLVLGDKEVESGQVNVRTREGENLGVMSVADFIELVQK 629


>gi|225076640|ref|ZP_03719839.1| hypothetical protein NEIFLAOT_01690 [Neisseria flavescens
           NRL30031/H210]
 gi|224952046|gb|EEG33255.1| hypothetical protein NEIFLAOT_01690 [Neisseria flavescens
           NRL30031/H210]
          Length = 643

 Score =  703 bits (1813), Expect = 0.0,   Method: Composition-based stats.
 Identities = 305/645 (47%), Positives = 444/645 (68%), Gaps = 16/645 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEII 62
            + +T PDGS++ +    T + +A SI   LAK  VA  +NGK+ D  DP+ E + ++II
Sbjct: 7   MLNITLPDGSVRQYESPVTVAQIAASIGAGLAKATVAGKVNGKLVDACDPITEDAHVQII 66

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TP+D   + +IRHSCAH++  AV+ ++P+ ++ IGP+IEDGFYYD   E+PF+ D++A I
Sbjct: 67  TPKDKEGVEIIRHSCAHLVGHAVKQLYPDAKMVIGPVIEDGFYYDIATEKPFTPDDVAAI 126

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M+E+IA+D   +K      +  ++F+ + E YK+ ++E +P  E + +Y   E+ D+
Sbjct: 127 EARMKELIAQDYDVIKVMTPRAETVKIFQDRGEEYKLRLIEDMPEVEAMGMYHHQEYVDM 186

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW ++ EL  Y+  +EE+E
Sbjct: 187 CRGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWASKDELKAYIQRIEEAE 245

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD 301
           KRDHRKL +++DLFH+ ++  G++FWH KGW ++Q +  +MR+++    Y+E+ TPQ++D
Sbjct: 246 KRDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQVIEQHMRKELNVAGYKEVKTPQIMD 305

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           +  W++SGHW++Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+R
Sbjct: 306 KTFWEKSGHWENYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMR 359

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF 
Sbjct: 360 LAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVDEARAFNELLVRIYKQFGFH 419

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + VKLS RPE+R GSD +WD AE  ++  L          +    L GEGAFYGPK EY
Sbjct: 420 DVAVKLSLRPEQRAGSDEVWDKAEQGLRDALTACG------VEWEELPGEGAFYGPKIEY 473

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+GR WQCGT+Q+DF LP R NA YV  ++++  PVM+HRA+ GS+ERFIGI+IEN
Sbjct: 474 HVKDALGRSWQCGTLQLDFVLPERLNAEYVTENNDRARPVMLHRAILGSLERFIGILIEN 533

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G+ PLWL+P+Q ++  IT +  +Y +E+A  L++    +E D RNE I YKIR++S  
Sbjct: 534 HAGSFPLWLAPVQMVIMNITENQADYCREVAAKLQAAGFRVELDLRNEKIGYKIRDNSQY 593

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           + P  I+ GDKE  E  + +R   +     +++ D I  L +E  
Sbjct: 594 RFPYQIVVGDKEKQENKVAVR-RKAEDLGSLNVDDFIAQLQQEIT 637


>gi|89900130|ref|YP_522601.1| threonyl-tRNA synthetase [Rhodoferax ferrireducens T118]
 gi|89344867|gb|ABD69070.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Rhodoferax
           ferrireducens T118]
          Length = 669

 Score =  703 bits (1813), Expect = 0.0,   Method: Composition-based stats.
 Identities = 323/649 (49%), Positives = 441/649 (67%), Gaps = 19/649 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            I++T PDGS +++P   T ++VA SI   LAK A+A  ++GKV D S  +    ++ I+
Sbjct: 29  MIQITLPDGSQRDYPAPVTVAEVAASIGSGLAKAALAGKVDGKVVDTSYLIEANSAVAIV 88

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   L VIRHS AH++A AV+ ++P+ QV IGP+IE+GF+YDF  ++PF+ ++L  I
Sbjct: 89  TAKDAEGLEVIRHSTAHLLAYAVKELFPDAQVTIGPVIENGFFYDFSYKRPFTPEDLLAI 148

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E+KM  + A+D P  ++ L  ++A   F+   E YK EI+ SIPA E+V+LYR+G++ DL
Sbjct: 149 EQKMAALAAKDEPVTRRVLPRDEAVAYFKGLGENYKAEIIASIPAGEDVSLYREGKFEDL 208

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG++K FFKLMK+AGAYWRGD    ML RIYGTAW T+ EL Q+L  LEE+E
Sbjct: 209 CRGPHVPSTGKLK-FFKLMKLAGAYWRGDHRNEMLQRIYGTAWATKDELQQHLTMLEEAE 267

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD 301
           KRDHRKL RE+DLFHI +   G++FWH KGW ++Q +  YMR+  + + Y+E+  PQ+LD
Sbjct: 268 KRDHRKLGRELDLFHIDDHAPGLVFWHPKGWTLWQGVEQYMRQVYRDNGYQEVKGPQILD 327

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+++GHWD YR NMF       T  + R +ALKPMNCPGH+ +F  G+KSYR+LP+R
Sbjct: 328 KSLWEKTGHWDKYRENMFT------TESEKREYALKPMNCPGHILIFKQGIKSYRDLPLR 381

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
             EFG  +RNEPSG LHG+MRVRGFTQDD H+FCT++Q+  EC+    L+  +Y DFGFE
Sbjct: 382 YGEFGQCHRNEPSGGLHGIMRVRGFTQDDGHIFCTEDQILQECVDYTALLQKVYADFGFE 441

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            I+ K++TRPE+R+GSD +WD AE  +   L              +  GEGAFYGPK EY
Sbjct: 442 NIIYKVATRPEQRIGSDDVWDKAEAALIESLRASGR------EFEISPGEGAFYGPKIEY 495

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            LKDAIGR WQCGTIQVDF++P R +A YV     +  PVM+HRA+ GS+ERFIGI+IE 
Sbjct: 496 TLKDAIGRHWQCGTIQVDFSMPERLDAEYVGEDGARHRPVMLHRAIVGSLERFIGILIEE 555

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSH----HLSIETDFRNETINYKIRE 597
             G LP WL+P+Q  V  IT +  EY +EI   LK+      L    D RNE I +KIRE
Sbjct: 556 SAGALPTWLAPVQVAVLNITDAQAEYCREIVEKLKNALPDQRLRAVADLRNEKITFKIRE 615

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           HS++K+P I++ GDKE +  ++ +R  G      +SL   +  ++ +  
Sbjct: 616 HSMQKLPYILVVGDKEKAAGTVAVRARGGLDLGVMSLDAFVQKISSDIT 664


>gi|240122983|ref|ZP_04735939.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
          Length = 648

 Score =  703 bits (1813), Expect = 0.0,   Method: Composition-based stats.
 Identities = 305/645 (47%), Positives = 444/645 (68%), Gaps = 16/645 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +T PD S++ +    T + +A SI   LAK AVA  +NGK+ D  DP+  + +++II
Sbjct: 12  MLNITLPDCSVRQYESPVTVAQIAASIGAGLAKAAVAGKVNGKLVDACDPIVEDSAVQII 71

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TP+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A I
Sbjct: 72  TPKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAI 131

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M+E+IA+D   +K      +A ++F+ + E YK+ +++ +P  E + +Y   E+ D+
Sbjct: 132 EARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLIDDMPEVEAMGIYHHQEYVDM 191

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+E
Sbjct: 192 CRGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKDYIQRIEEAE 250

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL +++DLFH+ ++  G++FWH KGW ++QT+  +MR+++    Y+E+ TPQ++D
Sbjct: 251 KRDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQTIEQHMRKELNAAGYKEVKTPQIMD 310

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           +  W++SGHWD+Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+R
Sbjct: 311 KTFWEKSGHWDNYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMR 364

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF 
Sbjct: 365 LAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFH 424

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + V+LS RPEKR GSD +WD AE  ++  L          +  G L GEGAFYGPK EY
Sbjct: 425 DVSVRLSLRPEKRAGSDDVWDKAEQGLREALTACG------VEWGELPGEGAFYGPKIEY 478

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+GR WQCGT+Q+DF LP R +A YV  ++++  PVM+HRA+ GS+ERF+GI+IEN
Sbjct: 479 HVKDALGRSWQCGTLQLDFVLPERLDAEYVTENNDRARPVMLHRAILGSLERFVGILIEN 538

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G+ PLWL+P+Q ++  IT +  +Y +E+A  L++     E D RNE I YKIR++S  
Sbjct: 539 HAGSFPLWLAPVQMVIMNITENQADYCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQY 598

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           + P  I+ GDKE  E  + +R   +     + L D I  L +E  
Sbjct: 599 RFPYQIVIGDKEKQENKVAVR-RKAEDLGSLDLDDFIAQLQQEIT 642


>gi|149926877|ref|ZP_01915136.1| threonyl-tRNA synthetase [Limnobacter sp. MED105]
 gi|149824429|gb|EDM83647.1| threonyl-tRNA synthetase [Limnobacter sp. MED105]
          Length = 635

 Score =  703 bits (1813), Expect = 0.0,   Method: Composition-based stats.
 Identities = 319/646 (49%), Positives = 435/646 (67%), Gaps = 18/646 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP    +  PDGS + F    T + VA SI   LAK A+A  +NG + D S  +  + S+
Sbjct: 1   MPV---IRLPDGSERVFDHPVTVAQVAASIGPGLAKAALAGTVNGTLVDTSYTIDNDSSL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            I+T +D   L +IRHS AH++A AV+ ++P  QV IGP+IEDGFYYDF  E+PF+ ++L
Sbjct: 58  SIVTEKDEEGLDMIRHSTAHLLAYAVKELFPTAQVTIGPVIEDGFYYDFSYERPFTPEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM E+   D    ++    + A + F+ + E YK EI+ SIP+ EN++LYR+G++
Sbjct: 118 EAIEKKMAELAKLDEVVTREEWVRDDAVQFFKDQGEHYKAEIIASIPSNENISLYREGKF 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV +TG++K F KLMKVAGAYWRG+SN  ML RIYGTAW  +++L  YL+ LE
Sbjct: 178 IDLCRGPHVPNTGKLKHF-KLMKVAGAYWRGNSNNEMLQRIYGTAWTKKEDLAAYLHRLE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQ 298
           E+EKRDHRKL +++DLFH+ ++  G++FWH KGW ++Q +  YMR+   D  Y+EI  PQ
Sbjct: 237 EAEKRDHRKLGKQLDLFHMQDEAPGLVFWHPKGWALWQQVEQYMRKVYVDGGYQEIRCPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +LD+ LW++SGHWD+Y+ NMF       T  + R +ALKPMNCPGH+ VF   L+SYR+L
Sbjct: 297 ILDRKLWEKSGHWDNYKENMFT------TESEKRDYALKPMNCPGHIEVFKSDLRSYRDL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R  EFG+ +RNE SG+LHG+MRVRGFTQDD H+FCT++Q+  E  K + + + +Y DF
Sbjct: 351 PMRYGEFGACHRNESSGALHGIMRVRGFTQDDGHIFCTEDQVQEEVTKFNQVAMQVYADF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF +I VKL+ RPE R+G+D  WD AE+ ++  L          +    L GEGAFYGPK
Sbjct: 411 GFNEINVKLALRPEARLGTDETWDKAEDSLRAALKACG------VQWTELPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            EY +KD+IGR WQCGTIQVDF LP R  A YV   + +  PVM+HRA+ GS+ERFIGI+
Sbjct: 465 IEYHMKDSIGRSWQCGTIQVDFQLPGRLGAEYVAEDNSRRVPVMLHRAIVGSMERFIGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IEN  G +P+WLSP+Q +V TIT +  EYA  +  +LK   + +E D RNE IN KIREH
Sbjct: 525 IENHAGAMPVWLSPVQVVVATITEAHNEYAHNVVQMLKKQGIRVEADLRNEKINRKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +++K P I + GD E     + +R  G+     + + D I  L  E
Sbjct: 585 TMQKTPYIAVIGDAERDANQVAVRLRGNENLGSLPVDDFIQRLLGE 630


>gi|194098020|ref|YP_002001068.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae NCCP11945]
 gi|193933310|gb|ACF29134.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae NCCP11945]
          Length = 648

 Score =  703 bits (1813), Expect = 0.0,   Method: Composition-based stats.
 Identities = 306/645 (47%), Positives = 444/645 (68%), Gaps = 16/645 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +T PD S++ +    T + +A SI   LAK AVA  +NGK+ D  DP+  + +++II
Sbjct: 12  MLNITLPDCSVRQYESPVTVAQIAASIGAGLAKAAVAGKVNGKLVDACDPIVEDSAVQII 71

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TP+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A I
Sbjct: 72  TPKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAI 131

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M+E+IA+D   +K      +A ++F+ + E YK+ ++E +P  E + +Y   E+ D+
Sbjct: 132 EARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLIEDMPEVEAMGIYHHQEYVDM 191

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+E
Sbjct: 192 CRGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKDYIQRIEEAE 250

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL +++DLFH+ ++  G++FWH KGW ++QT+  +MR+++    Y+E+ TPQ++D
Sbjct: 251 KRDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQTIEQHMRKELNAAGYKEVKTPQIMD 310

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           +  W++SGHWD+Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+R
Sbjct: 311 KTFWEKSGHWDNYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMR 364

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF 
Sbjct: 365 LAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFH 424

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + V+LS RPEKR GSD +WD AE  ++  L          +  G L GEGAFYGPK EY
Sbjct: 425 DVSVRLSLRPEKRAGSDDVWDKAEQGLREALTACG------VEWGELPGEGAFYGPKIEY 478

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+GR WQCGT+Q+DF LP R +A YV  ++++  PVM+HRA+ GS+ERF+GI+IEN
Sbjct: 479 HVKDALGRSWQCGTLQLDFVLPERLDAEYVTENNDRARPVMLHRAILGSLERFVGILIEN 538

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G+ PLWL+P+Q ++  IT +  +Y +E+A  L++     E D RNE I YKIR++S  
Sbjct: 539 HAGSFPLWLAPVQMVIMNITENQADYCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQY 598

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           + P  I+ GDKE  E  + +R   +     + L D I  L +E  
Sbjct: 599 RFPYQIVIGDKEKQENKVAVR-RKAEDLGSLDLDDFIAQLQQEIT 642


>gi|239998484|ref|ZP_04718408.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|240125235|ref|ZP_04738121.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
 gi|317163762|gb|ADV07303.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 648

 Score =  703 bits (1813), Expect = 0.0,   Method: Composition-based stats.
 Identities = 305/645 (47%), Positives = 444/645 (68%), Gaps = 16/645 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +T PD S++ +    T + +A SI   LAK AVA  +NGK+ D  DP+  + +++II
Sbjct: 12  MLNITLPDCSVRQYESPVTVAQIAASIGAGLAKAAVAGKVNGKLVDACDPIVEDSAVQII 71

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TP+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A I
Sbjct: 72  TPKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAI 131

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M+E+IA+D   +K      +A ++F+ + E YK+ ++E +P  E + +Y   E+ D+
Sbjct: 132 EARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLIEDMPEVEAMGMYHHQEYVDM 191

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+E
Sbjct: 192 CRGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKDYIQRIEEAE 250

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL +++DLFH+ ++  G++FWH KGW +++T+  +MR+++    Y+E+ TPQ++D
Sbjct: 251 KRDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWRTIEQHMRKELNAAGYKEVKTPQIMD 310

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           +  W++SGHWD+Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+R
Sbjct: 311 KTFWEKSGHWDNYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMR 364

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF 
Sbjct: 365 LAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFH 424

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + V+LS RPEKR GSD +WD AE  ++  L          +  G L GEGAFYGPK EY
Sbjct: 425 DVSVRLSLRPEKRAGSDDVWDKAEQGLREALTACG------VEWGELPGEGAFYGPKIEY 478

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+GR WQCGT+Q+DF LP R +A YV  ++++  PVM+HRA+ GS+ERF+GI+IEN
Sbjct: 479 HVKDALGRSWQCGTLQLDFVLPERLDAEYVTENNDRARPVMLHRAILGSLERFVGILIEN 538

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G+ PLWL+P+Q ++  IT +  +Y +E+A  L++     E D RNE I YKIR++S  
Sbjct: 539 HAGSFPLWLAPVQMVIMNITENQADYCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQY 598

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           + P  I+ GDKE  E  + +R   +     + L D I  L +E  
Sbjct: 599 RFPYQIVIGDKEKQENKVAVR-RKAEDLGSLDLDDFIAQLQQEIT 642


>gi|309378779|emb|CBX22605.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 637

 Score =  703 bits (1813), Expect = 0.0,   Method: Composition-based stats.
 Identities = 304/643 (47%), Positives = 443/643 (68%), Gaps = 16/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +T PDGS++ +    T + +A S+   LAK AVA  +NGK+ D  DP+  + +++II
Sbjct: 1   MLNITLPDGSVRQYESPVTVAQIAASVGAGLAKAAVAGKVNGKLVDACDPITEDSTVQII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TP+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A I
Sbjct: 61  TPKDREGVEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M+E+IA+D   +K      +A ++F+ + E YK+ +++ +P  E + +Y   E+ D+
Sbjct: 121 EARMKELIAQDYDVIKIMTPRAEAVKIFQDRGEEYKLRLIDDMPEVEAMGMYHHQEYVDM 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+E
Sbjct: 181 CRGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKAYIRRIEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL +++DLFH+ ++  G++FWH KGW ++Q +  +MR+++    Y+E+ TPQ++D
Sbjct: 240 KRDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQAVEQHMRKELNAAGYKEVKTPQIMD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           +  W++SGHW++Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+R
Sbjct: 300 KTFWEKSGHWENYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF 
Sbjct: 354 LAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARVFNELLVRIYKQFGFH 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + VKLS RP KR GSD +WD AE  ++  L          +    L GEGAFYGPK EY
Sbjct: 414 DVSVKLSLRPGKRAGSDEVWDKAEQGLREALTACG------VEWEELPGEGAFYGPKIEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+GR WQCGT+Q+DF LP R NA YV  ++++  PVM+HRA+ GS+ERFIGI+IEN
Sbjct: 468 HVKDALGRSWQCGTLQLDFVLPERLNAEYVTENNDRARPVMLHRAILGSLERFIGILIEN 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G+ PLWL+P+Q ++  IT +  +Y +E+A  L++    +E D RNE I YKIR++S  
Sbjct: 528 HAGSFPLWLAPVQMVIMNITENQADYCREVAARLQAAGFRVELDLRNEKIGYKIRDNSQY 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           + P  I+ GDKE  E  + +R   +     + L D I  L +E
Sbjct: 588 RFPYQIVVGDKEKQENKVAVR-RKAEDLGSLDLDDFIAQLQQE 629


>gi|59800743|ref|YP_207455.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090]
 gi|73919809|sp|Q5F9U4|SYT_NEIG1 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|59717638|gb|AAW89043.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090]
          Length = 637

 Score =  702 bits (1812), Expect = 0.0,   Method: Composition-based stats.
 Identities = 306/645 (47%), Positives = 444/645 (68%), Gaps = 16/645 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +T PD S++ +    T + +A SI   LAK AVA  +NGK+ D  DP+  + +++II
Sbjct: 1   MLNITLPDCSVRQYESPVTVAQIAASIGAGLAKAAVAGKVNGKLVDACDPIVEDSAVQII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TP+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A I
Sbjct: 61  TPKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M+E+IA+D   +K      +A ++F+ + E YK+ +++ +P  E + +Y   E+ D+
Sbjct: 121 EARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLIDDMPEVEAMGIYHHQEYVDM 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+E
Sbjct: 181 CRGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKDYIQRIEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL +++DLFH+ ++  G++FWH KGW ++QT+  +MR+++    Y+E+ TPQ++D
Sbjct: 240 KRDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQTIEQHMRKELNAAGYKEVKTPQIMD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           +  W++SGHWD+Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+R
Sbjct: 300 KTFWEKSGHWDNYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF 
Sbjct: 354 LAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFH 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + V+LS RPEKR GSD +WD AE  ++  L          +  G L GEGAFYGPK EY
Sbjct: 414 DVSVRLSLRPEKRAGSDDVWDKAEQGLREALTACG------VEWGELPGEGAFYGPKIEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+GR WQCGT+Q+DF LP R +A YV  ++++  PVM+HRA+ GS+ERFIGI+IEN
Sbjct: 468 HVKDALGRSWQCGTLQLDFVLPERLDAEYVTENNDRARPVMLHRAILGSLERFIGILIEN 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G+ PLWL+P+Q ++  IT +  +Y +E+A  L++     E D RNE I YKIR++S  
Sbjct: 528 HAGSFPLWLAPVQMVIMNITENQADYCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQY 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           + P  I+ GDKE  E  + +R   +     + L D I  L +E  
Sbjct: 588 RFPYQIVIGDKEKQENKVAVR-RKAEDLGSLDLDDFIAQLQQEIT 631


>gi|288576250|ref|ZP_05978464.2| threonine--tRNA ligase [Neisseria mucosa ATCC 25996]
 gi|288565905|gb|EFC87465.1| threonine--tRNA ligase [Neisseria mucosa ATCC 25996]
          Length = 643

 Score =  702 bits (1812), Expect = 0.0,   Method: Composition-based stats.
 Identities = 307/643 (47%), Positives = 443/643 (68%), Gaps = 16/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEII 62
            + +T PDGS++ +    T + +A SI   LAK  VA  +NGK+ D  DP+ E S ++II
Sbjct: 7   MLNITLPDGSVRQYESPVTVAQIAASIGAGLAKATVAGKVNGKLVDACDPITEDSAVQII 66

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TP+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A I
Sbjct: 67  TPKDQEGVEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAI 126

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M+E+IA+D   +K      +  ++F+ + E YK+ +++ +P  E + +Y   E+ D+
Sbjct: 127 EARMKELIAQDYDVIKIMTPRAETIKIFQDRGEEYKLRLIDDMPEVEAMGMYHHQEYVDM 186

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T++EL  Y+  +EE+E
Sbjct: 187 CRGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKEELKAYIQRIEEAE 245

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL +++DLFH+ ++  G++FWH KGW ++QT+  +MR+++    Y+E+ TPQ++D
Sbjct: 246 KRDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQTIEQHMRKELNAAGYKEVKTPQIMD 305

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           +  W++SGHWD+Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+R
Sbjct: 306 KTFWEKSGHWDNYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMR 359

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF 
Sbjct: 360 LAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFH 419

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + VKLS RPEKR GSD +WD AE  ++  L          +    L GEGAFYGPK EY
Sbjct: 420 DVSVKLSLRPEKRAGSDDVWDKAEQGLRDALTACG------VEWDELPGEGAFYGPKIEY 473

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+GR WQCGT+Q+DF LP R +A YV  ++++  PVM+HRA+ GS+ERFIGI+IEN
Sbjct: 474 HVKDALGRSWQCGTLQLDFVLPERLDAEYVTENNDRARPVMLHRAILGSLERFIGILIEN 533

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G+ PLWL+P+Q ++  IT +  +Y  E+A  L++    +E D RNE I YKIR++S  
Sbjct: 534 HAGSFPLWLAPVQMVIMNITENQADYCCEVAAKLQAAGFRVELDLRNEKIGYKIRDNSQY 593

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           + P  I+ GDKE  E  + +R   +     + L D I  L +E
Sbjct: 594 RFPYQIVVGDKEKQENKVAVR-RKAEDLGSLDLDDFIARLQQE 635


>gi|240016048|ref|ZP_04722588.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae FA6140]
          Length = 648

 Score =  702 bits (1812), Expect = 0.0,   Method: Composition-based stats.
 Identities = 305/645 (47%), Positives = 445/645 (68%), Gaps = 16/645 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +T PD S++ +    T + +A SI   LAK AVA  +NGK+ D  DP+  + +++II
Sbjct: 12  MLNITLPDCSVRQYESPVTVAQIAASIGAGLAKAAVAGKVNGKLVDACDPIVEDSAVQII 71

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TP+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A I
Sbjct: 72  TPKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAI 131

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M+E+IA+D   +K      +A ++F+ + E YK+ +++ +P  E + +Y   E+ D+
Sbjct: 132 EARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLIDDMPEVEAMGMYHHQEYVDM 191

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+E
Sbjct: 192 CRGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKDYIQRIEEAE 250

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL +++DLFH+ ++  G++FWH KGW ++QT+  +MR+++    Y+E+ TPQ++D
Sbjct: 251 KRDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQTIEQHMRKELNAAGYKEVKTPQIMD 310

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           +  W++SGHWD+Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+R
Sbjct: 311 KTFWEKSGHWDNYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMR 364

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF 
Sbjct: 365 LAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFH 424

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + V+LS RPEKR GSD +WD AE  ++  L          +  G L GEGAFYGPK EY
Sbjct: 425 DVSVRLSLRPEKRAGSDDVWDKAEQGLREALTACG------VEWGELPGEGAFYGPKIEY 478

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+GR WQCGT+Q+DF LP R +A YV  ++++  PVM+HRA+ GS+ERF+GI+IEN
Sbjct: 479 HVKDALGRSWQCGTLQLDFVLPERLDAEYVTENNDRARPVMLHRAILGSLERFVGILIEN 538

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G+ PLWL+P+Q ++  IT +  +Y +E+A  L++     E D RNE I YKIR++S  
Sbjct: 539 YAGSFPLWLAPVQMVIMNITENQADYCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQY 598

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           + P  I+ GDKE  E  + +R   +     + L D I  L +E  
Sbjct: 599 RFPYQIVIGDKEKQENKVAVR-RKAEDLGSLDLDDFIAQLQQEIT 642


>gi|329115645|ref|ZP_08244367.1| Threonyl-tRNA synthetase [Acetobacter pomorum DM001]
 gi|326695073|gb|EGE46792.1| Threonyl-tRNA synthetase [Acetobacter pomorum DM001]
          Length = 645

 Score =  702 bits (1812), Expect = 0.0,   Method: Composition-based stats.
 Identities = 328/654 (50%), Positives = 463/654 (70%), Gaps = 15/654 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP+   +T PDGS+++F    TG+ VAE+I   LAK A+A+ ++GK+CD+   + ++  +
Sbjct: 3   MPA---ITLPDGSVRSFDGPVTGTTVAEAIGPGLAKAALAMEVDGKLCDIRQTIQKDAVL 59

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
             IT +DP SL +IRH  AH++AEAVQ+++P  QV IGP IE+GFYYDF + +PFS ++ 
Sbjct: 60  RFITRKDPESLELIRHDAAHVLAEAVQALYPGTQVTIGPSIENGFYYDFYRSEPFSPEDF 119

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A IE KM+EI+A+  PF+++    + A + FE + E +K E++  +P  E +++YRQGEW
Sbjct: 120 AAIEAKMREIVAKAEPFVREVWKRDDAIQFFEDRGEKFKAELIRDLPEDEEISIYRQGEW 179

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPH+R+T  V   FKLMKVAGAYWRGD   PML+R+YGTAW  Q+EL  +L+ LE
Sbjct: 180 LDLCRGPHLRTTKDVGNAFKLMKVAGAYWRGDHRNPMLTRVYGTAWRDQKELDAHLHQLE 239

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+EKRDHR++ +EM LFH  E+  G +FWH KGW+++  L  YMRR + +  Y+E+ TPQ
Sbjct: 240 EAEKRDHRRIGKEMGLFHFQEEAVGQVFWHAKGWRLYTALQDYMRRAQTRHGYQEVRTPQ 299

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D+ LW+ SGHWD YR +MF     D    + +T ALKPMNCP HV +F HGL+SYREL
Sbjct: 300 LVDRALWEASGHWDKYRHHMFIATVED----ENKTLALKPMNCPCHVQIFRHGLRSYREL 355

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG+ +R EPSG+LHGLMRVRGFTQDDAH+FCT++Q+ +E ++   ++  +Y+D 
Sbjct: 356 PLRMAEFGACHRYEPSGALHGLMRVRGFTQDDAHIFCTEDQIADETVRFVKMLHDVYQDL 415

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE + VK + RPE+R GSD +WD AEN +K         +   +      GEGAFYGPK
Sbjct: 416 GFEHVRVKFADRPEQRAGSDEVWDKAENALKEA------CTVAGVEYEHNPGEGAFYGPK 469

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E++L+DAIGRDWQCGT+QVD  LP R +A Y+   S +  PVM+HRA+ GS ERF+GI+
Sbjct: 470 LEFVLRDAIGRDWQCGTLQVDLVLPERLDASYIGEDSGRHRPVMLHRAILGSFERFLGIL 529

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE   G  PLWL+P+Q +V +I S A  YA+E+A  L+   L++E D RN+ IN K+REH
Sbjct: 530 IEQHAGRFPLWLAPVQVVVASIVSDAAPYAEEVAAALREAGLAVEADVRNDKINAKVREH 589

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           S+ ++P+I++ G +EA ER++ +RR G+   + +SL DA+  L  E+ PPD +K
Sbjct: 590 SVARVPVILVVGRREAEERTVAMRRLGTQAQETLSLNDAVARLKNEATPPDLRK 643


>gi|240013609|ref|ZP_04720522.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae DGI18]
 gi|240112403|ref|ZP_04726893.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|240120679|ref|ZP_04733641.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae PID24-1]
          Length = 648

 Score =  702 bits (1812), Expect = 0.0,   Method: Composition-based stats.
 Identities = 306/645 (47%), Positives = 444/645 (68%), Gaps = 16/645 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +T PD S++ +    T + +A SI   LAK AVA  +NGK+ D  DP+  + +++II
Sbjct: 12  MLNITLPDCSVRQYESPVTVAQIAASIGAGLAKAAVAGKVNGKLVDACDPIVEDSAVQII 71

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TP+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A I
Sbjct: 72  TPKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAI 131

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M+E+IA+D   +K      +A ++F+ + E YK+ ++E +P  E + +Y   E+ D+
Sbjct: 132 EARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLIEDMPEVEAMGMYHHQEYVDM 191

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+E
Sbjct: 192 CRGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKDYIQRIEEAE 250

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL +++DLFH+ ++  G++FWH KGW ++QT+  +MR+++    Y+E+ TPQ++D
Sbjct: 251 KRDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQTIEQHMRKELNAAGYKEVKTPQIMD 310

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           +  W++SGHWD+Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+R
Sbjct: 311 KTFWEKSGHWDNYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMR 364

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF 
Sbjct: 365 LAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFH 424

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + V+LS RPEKR GSD +WD AE  ++  L          +  G L GEGAFYGPK EY
Sbjct: 425 DVSVRLSLRPEKRAGSDDVWDKAEQGLREALTACG------VEWGELPGEGAFYGPKIEY 478

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+GR WQCGT+Q+DF LP R +A YV  ++++  PVM+HRA+ GS+ERF+GI+IEN
Sbjct: 479 HVKDALGRSWQCGTLQLDFVLPERLDAEYVTENNDRARPVMLHRAILGSLERFVGILIEN 538

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G+ PLWL+P+Q ++  IT +  +Y +E+A  L++     E D RNE I YKIR++S  
Sbjct: 539 HAGSFPLWLAPVQMVIMNITENQADYCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQY 598

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           + P  I+ GDKE  E  + +R   +     + L D I  L +E  
Sbjct: 599 RFPYQIVIGDKEKQENKVAVR-RKAEDLGSLDLDDFIAQLQQEIT 642


>gi|240115143|ref|ZP_04729205.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|291044371|ref|ZP_06570080.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
 gi|291011265|gb|EFE03261.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
          Length = 648

 Score =  702 bits (1811), Expect = 0.0,   Method: Composition-based stats.
 Identities = 304/645 (47%), Positives = 443/645 (68%), Gaps = 16/645 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +T PD S++ +    T + +A SI   LAK AVA  +NGK+ D  DP+  + +++II
Sbjct: 12  MLNITLPDCSVRQYESPVTVAQIAASIGAGLAKAAVAGKVNGKLVDACDPIVEDSAVQII 71

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TP+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A I
Sbjct: 72  TPKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAI 131

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M+E+IA+D   +K      +A ++F+ + E YK+ +++ +P  E + +Y   E+ D+
Sbjct: 132 EARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLIDDMPEVEAMGIYHHQEYVDM 191

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+E
Sbjct: 192 CRGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKDYIQRIEEAE 250

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL +++DLFH+ ++  G++FWH KGW ++Q +  +MR+++    Y+E+ TPQ++D
Sbjct: 251 KRDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMD 310

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           +  W++SGHWD+Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+R
Sbjct: 311 KTFWEKSGHWDNYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMR 364

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF 
Sbjct: 365 LAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFH 424

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + V+LS RPEKR GSD +WD AE  ++  L          +  G L GEGAFYGPK EY
Sbjct: 425 DVSVRLSLRPEKRAGSDDVWDKAEQGLREALTACG------VEWGELPGEGAFYGPKIEY 478

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+GR WQCGT+Q+DF LP R +A YV  ++++  PVM+HRA+ GS+ERF+GI+IEN
Sbjct: 479 HVKDALGRSWQCGTLQLDFVLPERLDAEYVTENNDRARPVMLHRAILGSLERFVGILIEN 538

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G+ PLWL+P+Q ++  IT +  +Y +E+A  L++     E D RNE I YKIR++S  
Sbjct: 539 HAGSFPLWLAPVQMVIMNITENQADYCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQY 598

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           + P  I+ GDKE  E  + +R   +     + L D I  L +E  
Sbjct: 599 RFPYQIVIGDKEKQENKVAVR-RKAEDLGSLDLDDFIAQLQQEIT 642


>gi|268681605|ref|ZP_06148467.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|268621889|gb|EEZ54289.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
          Length = 637

 Score =  702 bits (1811), Expect = 0.0,   Method: Composition-based stats.
 Identities = 305/645 (47%), Positives = 444/645 (68%), Gaps = 16/645 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +T PD S++ +    T + +A SI   LAK AVA  +NGK+ D  DP+  + +++II
Sbjct: 1   MLNITLPDCSVRQYESPVTVAQIAASIGAGLAKAAVAGKVNGKLVDACDPIVEDSAVQII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TP+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A I
Sbjct: 61  TPKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M+E+IA+D   +K      +A ++F+ + E YK+ +++ +P  E + +Y   E+ D+
Sbjct: 121 EARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLIDDMPEVEAMGIYHHQEYVDM 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+E
Sbjct: 181 CRGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKDYIQRIEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL +++DLFH+ ++  G++FWH KGW ++QT+  +MR+++    Y+E+ TPQ++D
Sbjct: 240 KRDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQTIEQHMRKELNAAGYKEVKTPQIMD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           +  W++SGHWD+Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+R
Sbjct: 300 KTFWEKSGHWDNYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF 
Sbjct: 354 LAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFH 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + V+LS RPEKR GSD +WD AE  ++  L          +  G L GEGAFYGPK EY
Sbjct: 414 DVSVRLSLRPEKRAGSDDVWDKAEQGLREALTACG------VEWGELPGEGAFYGPKIEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+GR WQCGT+Q+DF LP R +A YV  ++++  PVM+HRA+ GS+ERF+GI+IEN
Sbjct: 468 HVKDALGRSWQCGTLQLDFVLPERLDAEYVTENNDRARPVMLHRAILGSLERFVGILIEN 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G+ PLWL+P+Q ++  IT +  +Y +E+A  L++     E D RNE I YKIR++S  
Sbjct: 528 HAGSFPLWLAPVQMVIMNITENQADYCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQY 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           + P  I+ GDKE  E  + +R   +     + L D I  L +E  
Sbjct: 588 RFPYQIVIGDKEKQENKVAVR-RKAEDLGSLDLDDFIAQLQQEIT 631


>gi|240080190|ref|ZP_04724733.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
          Length = 648

 Score =  702 bits (1811), Expect = 0.0,   Method: Composition-based stats.
 Identities = 306/645 (47%), Positives = 444/645 (68%), Gaps = 16/645 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +T PD S++ +    T + +A SI   LAK AVA  +NGK+ D  DP+  + +++II
Sbjct: 12  MLNITLPDCSVRQYESPVTVAQIAASIGAGLAKAAVAGKVNGKLVDACDPIVEDSAVQII 71

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TP+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A I
Sbjct: 72  TPKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAI 131

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M+E+IA+D   +K      +A ++F+ + E YK+ +++ +P  E + +Y   E+ D+
Sbjct: 132 EARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLIDDMPEVEAMGIYHHQEYVDM 191

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+E
Sbjct: 192 CRGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKDYIQRIEEAE 250

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL +++DLFH+ ++  G++FWH KGW ++QT+  +MR+++    Y+E+ TPQ++D
Sbjct: 251 KRDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQTIEQHMRKELNAAGYKEVKTPQIMD 310

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           +  W++SGHWD+Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+R
Sbjct: 311 KTFWEKSGHWDNYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMR 364

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF 
Sbjct: 365 LAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFH 424

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + V+LS RPEKR GSD +WD AE  ++  L          +  G L GEGAFYGPK EY
Sbjct: 425 DVSVRLSLRPEKRAGSDDVWDKAEQGLREALTACG------VEWGELPGEGAFYGPKIEY 478

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+GR WQCGT+Q+DF LP R +A YV  ++++  PVM+HRA+ GS+ERFIGI+IEN
Sbjct: 479 RVKDALGRSWQCGTLQLDFVLPERLDAEYVTENNDRARPVMLHRAILGSLERFIGILIEN 538

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G+ PLWL+P+Q ++  IT +  +Y +E+A  L++     E D RNE I YKIR++S  
Sbjct: 539 HAGSFPLWLAPVQMVIMNITENQADYCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQY 598

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           + P  I+ GDKE  E  + +R   +     + L D I  L +E  
Sbjct: 599 RFPYQIVIGDKEKQENKVAVR-RKAEDLGSLDLDDFIAQLQQEIT 642


>gi|268683833|ref|ZP_06150695.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
 gi|268624117|gb|EEZ56517.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
          Length = 637

 Score =  702 bits (1811), Expect = 0.0,   Method: Composition-based stats.
 Identities = 305/645 (47%), Positives = 444/645 (68%), Gaps = 16/645 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +T PD S++ +    T + +A SI   LAK AVA  +NGK+ D  DP+  + +++II
Sbjct: 1   MLNITLPDCSVRQYESPVTVAQIAASIGAGLAKAAVAGKVNGKLVDACDPIVEDSAVQII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TP+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A I
Sbjct: 61  TPKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M+E+IA+D   +K      +A ++F+ + E YK+ ++E +P  E + +Y   E+ D+
Sbjct: 121 EARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLIEDMPEVEAMGMYHHQEYVDM 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+E
Sbjct: 181 CRGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKDYIQRIEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL +++DLFH+ ++  G++FWH KGW +++T+  +MR+++    Y+E+ TPQ++D
Sbjct: 240 KRDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWRTIEQHMRKELNAAGYKEVKTPQIMD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           +  W++SGHWD+Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+R
Sbjct: 300 KTFWEKSGHWDNYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF 
Sbjct: 354 LAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFH 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + V+LS RPEKR GSD +WD AE  ++  L          +  G L GEGAFYGPK EY
Sbjct: 414 DVSVRLSLRPEKRAGSDDVWDKAEQGLREALTACG------VEWGELPGEGAFYGPKIEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+GR WQCGT+Q+DF LP R +A YV  ++++  PVM+HRA+ GS+ERF+GI+IEN
Sbjct: 468 HVKDALGRSWQCGTLQLDFVLPERLDAEYVTENNDRARPVMLHRAILGSLERFVGILIEN 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G+ PLWL+P+Q ++  IT +  +Y +E+A  L++     E D RNE I YKIR++S  
Sbjct: 528 HAGSFPLWLAPVQMVIMNITENQADYCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQY 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           + P  I+ GDKE  E  + +R   +     + L D I  L +E  
Sbjct: 588 RFPYQIVIGDKEKQENKVAVR-RKAEDLGSLDLDDFIAQLQQEIT 631


>gi|240117427|ref|ZP_04731489.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
          Length = 648

 Score =  701 bits (1810), Expect = 0.0,   Method: Composition-based stats.
 Identities = 304/645 (47%), Positives = 443/645 (68%), Gaps = 16/645 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +T PD S++ +    T + +A SI   LAK AVA  +NGK+ D  DP+  + +++II
Sbjct: 12  MLNITLPDCSVRQYESPVTVAQIAASIGAGLAKAAVAGKVNGKLVDACDPIVEDSAVQII 71

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TP+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A I
Sbjct: 72  TPKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAI 131

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M+E+IA+D   +K      +A ++F+ + E YK+ +++ +P  E + +Y   E+ D+
Sbjct: 132 EARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLIDDMPEVEAMGMYHHQEYVDM 191

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+E
Sbjct: 192 CRGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKDYIQRIEEAE 250

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL +++DLFH+ ++  G++FWH KGW ++Q +  +MR+++    Y+E+ TPQ++D
Sbjct: 251 KRDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMD 310

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           +  W++SGHWD+Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+R
Sbjct: 311 KTFWEKSGHWDNYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMR 364

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF 
Sbjct: 365 LAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFH 424

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + V+LS RPEKR GSD +WD AE  ++  L          +  G L GEGAFYGPK EY
Sbjct: 425 DVSVRLSLRPEKRAGSDDVWDKAEQGLREALTACG------VEWGELPGEGAFYGPKIEY 478

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+GR WQCGT+Q+DF LP R +A YV  ++++  PVM+HRA+ GS+ERF+GI+IEN
Sbjct: 479 HVKDALGRSWQCGTLQLDFVLPERLDAEYVTENNDRARPVMLHRAILGSLERFVGILIEN 538

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G+ PLWL+P+Q ++  IT +  +Y +E+A  L++     E D RNE I YKIR++S  
Sbjct: 539 HAGSFPLWLAPVQMVIMNITENQADYCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQY 598

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           + P  I+ GDKE  E  + +R   +     + L D I  L +E  
Sbjct: 599 RFPYQIVIGDKEKQENKVAVR-RKAEDLGSLDLDDFIAQLQQEIT 642


>gi|254493203|ref|ZP_05106374.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
 gi|268598466|ref|ZP_06132633.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|226512243|gb|EEH61588.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
 gi|268582597|gb|EEZ47273.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
          Length = 637

 Score =  701 bits (1810), Expect = 0.0,   Method: Composition-based stats.
 Identities = 306/645 (47%), Positives = 444/645 (68%), Gaps = 16/645 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +T PD S++ +    T + +A SI   LAK AVA  +NGK+ D  DP+  + +++II
Sbjct: 1   MLNITLPDCSVRQYESPVTVAQIAASIGAGLAKAAVAGKVNGKLVDACDPIVEDSAVQII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TP+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A I
Sbjct: 61  TPKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M+E+IA+D   +K      +A ++F+ + E YK+ ++E +P  E + +Y   E+ D+
Sbjct: 121 EARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLIEDMPEVEAMGMYHHQEYVDM 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+E
Sbjct: 181 CRGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKDYIQRIEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL +++DLFH+ ++  G++FWH KGW ++QT+  +MR+++    Y+E+ TPQ++D
Sbjct: 240 KRDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQTIEQHMRKELNAAGYKEVKTPQIMD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           +  W++SGHWD+Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+R
Sbjct: 300 KTFWEKSGHWDNYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF 
Sbjct: 354 LAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFH 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + V+LS RPEKR GSD +WD AE  ++  L          +  G L GEGAFYGPK EY
Sbjct: 414 DVSVRLSLRPEKRAGSDDVWDKAEQGLREALTACG------VEWGELPGEGAFYGPKIEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+GR WQCGT+Q+DF LP R +A YV  ++++  PVM+HRA+ GS+ERF+GI+IEN
Sbjct: 468 HVKDALGRSWQCGTLQLDFVLPERLDAEYVTENNDRARPVMLHRAILGSLERFVGILIEN 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G+ PLWL+P+Q ++  IT +  +Y +E+A  L++     E D RNE I YKIR++S  
Sbjct: 528 HAGSFPLWLAPVQMVIMNITENQADYCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQY 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           + P  I+ GDKE  E  + +R   +     + L D I  L +E  
Sbjct: 588 RFPYQIVIGDKEKQENKVAVR-RKAEDLGSLDLDDFIAQLQQEIT 631


>gi|238021043|ref|ZP_04601469.1| hypothetical protein GCWU000324_00940 [Kingella oralis ATCC 51147]
 gi|237868023|gb|EEP69029.1| hypothetical protein GCWU000324_00940 [Kingella oralis ATCC 51147]
          Length = 637

 Score =  701 bits (1810), Expect = 0.0,   Method: Composition-based stats.
 Identities = 299/645 (46%), Positives = 434/645 (67%), Gaps = 17/645 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
           S + +T PDGS++ +    T + +A  I   LAK  VA  +NG + D SDP+  + S++I
Sbjct: 2   SQLNITLPDGSVRQYESPTTIAQIAADIGAGLAKATVAGKVNGILRDASDPITEDASVQI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           ITP+DP  + +IRHSCAH++  AV+ ++P V++ IGP+IEDGFYYD   E+PF+ +++A 
Sbjct: 62  ITPKDPEGVEIIRHSCAHLVGHAVKQLFPSVKMVIGPVIEDGFYYDIFSEKPFTPEDIAA 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-ENVTLYRQGEWF 180
           IE +M+E+I +D   +K+     +  E+F+ + E YK+ +++ +      + +Y   E+ 
Sbjct: 122 IETRMKELINQDYDVIKKMTPRAEVIEIFKQRGEDYKLRLIDDMADDITAMGMYYHQEYV 181

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           D+CRGPHV +T  +K F KL KV+GAYWRGDSN   L RIYGTAW  + +L  Y+  +EE
Sbjct: 182 DMCRGPHVPNTRFLKNF-KLTKVSGAYWRGDSNNEQLQRIYGTAWANKDDLKAYITRIEE 240

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQV 299
           +EKRDHRKL +++DLFH+ ++  G++FWH +GW ++Q +  +MRR++    Y+E+ TPQ+
Sbjct: 241 AEKRDHRKLGKQLDLFHLQDEAPGMVFWHPRGWTLWQVIEQHMRRELTAAGYQEVKTPQI 300

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           +D+  W++SGHW +Y+ NMF       T  + R +A+KPMNCPGHV +FNHGL+SY +LP
Sbjct: 301 MDKTFWEKSGHWANYKDNMFL------TSSEKRDYAVKPMNCPGHVQIFNHGLRSYNDLP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +RLAEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+  E    + L++ IY+ FG
Sbjct: 355 MRLAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIAEETRAFNQLVMKIYRQFG 414

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F  + +KLS RPEKR GSD +WD AE  ++  L     + Q+      L GEGAFYGPK 
Sbjct: 415 FHDVSIKLSLRPEKRAGSDEIWDKAEQGLRDALTACGVTWQE------LPGEGAFYGPKV 468

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           EY +KDA+GR WQCGTIQ+DF LP R +A YV   + +  PVM+HRA+ GS+ERFIGI+I
Sbjct: 469 EYHIKDALGRSWQCGTIQLDFVLPERLDAEYVTRDNNRARPVMLHRAILGSLERFIGILI 528

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E   G+ PLWL+P+Q +V  IT    +Y +E+   L++     E D RNE I YKIR++S
Sbjct: 529 EQHAGSFPLWLAPVQMVVMNITEKQADYCREVVAKLQAAGFRAELDLRNEKIGYKIRDNS 588

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            ++ P  I+ GDKE     + +R+  +     + + D I  L +E
Sbjct: 589 SQRYPYQIVVGDKEMENGQVAVRK-KAEDLGSLKVEDFIERLLEE 632


>gi|260441039|ref|ZP_05794855.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
 gi|268600819|ref|ZP_06134986.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|268584950|gb|EEZ49626.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
          Length = 637

 Score =  701 bits (1809), Expect = 0.0,   Method: Composition-based stats.
 Identities = 304/645 (47%), Positives = 443/645 (68%), Gaps = 16/645 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +T PD S++ +    T + +A SI   LAK AVA  +NGK+ D  DP+  + +++II
Sbjct: 1   MLNITLPDCSVRQYESPVTVAQIAASIGAGLAKAAVAGKVNGKLVDACDPIVEDSAVQII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TP+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A I
Sbjct: 61  TPKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M+E+IA+D   +K      +A ++F+ + E YK+ +++ +P  E + +Y   E+ D+
Sbjct: 121 EARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLIDDMPEVEAMGIYHHQEYVDM 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+E
Sbjct: 181 CRGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKDYIQRIEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL +++DLFH+ ++  G++FWH KGW ++Q +  +MR+++    Y+E+ TPQ++D
Sbjct: 240 KRDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           +  W++SGHWD+Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+R
Sbjct: 300 KTFWEKSGHWDNYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF 
Sbjct: 354 LAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFH 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + V+LS RPEKR GSD +WD AE  ++  L          +  G L GEGAFYGPK EY
Sbjct: 414 DVSVRLSLRPEKRAGSDDVWDKAEQGLREALTACG------VEWGELPGEGAFYGPKIEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+GR WQCGT+Q+DF LP R +A YV  ++++  PVM+HRA+ GS+ERF+GI+IEN
Sbjct: 468 HVKDALGRSWQCGTLQLDFVLPERLDAEYVTENNDRARPVMLHRAILGSLERFVGILIEN 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G+ PLWL+P+Q ++  IT +  +Y +E+A  L++     E D RNE I YKIR++S  
Sbjct: 528 HAGSFPLWLAPVQMVIMNITENQADYCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQY 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           + P  I+ GDKE  E  + +R   +     + L D I  L +E  
Sbjct: 588 RFPYQIVIGDKEKQENKVAVR-RKAEDLGSLDLDDFIAQLQQEIT 631


>gi|268594343|ref|ZP_06128510.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|268547732|gb|EEZ43150.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
          Length = 638

 Score =  701 bits (1809), Expect = 0.0,   Method: Composition-based stats.
 Identities = 305/645 (47%), Positives = 444/645 (68%), Gaps = 16/645 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +T PD S++ +    T + +A SI   LAK AVA  +NGK+ D  DP+  + +++II
Sbjct: 2   MLNITLPDCSVRQYESPVTVAQIAASIGAGLAKAAVAGKVNGKLVDACDPIVEDSAVQII 61

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TP+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A I
Sbjct: 62  TPKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M+E+IA+D   +K      +A ++F+ + E YK+ ++E +P  E + +Y   E+ D+
Sbjct: 122 EARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLIEDMPEVEAMGMYHHQEYVDM 181

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+E
Sbjct: 182 CRGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKDYIQRIEEAE 240

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL +++DLFH+ ++  G++FWH KGW +++T+  +MR+++    Y+E+ TPQ++D
Sbjct: 241 KRDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWRTIEQHMRKELNAAGYKEVKTPQIMD 300

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           +  W++SGHWD+Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+R
Sbjct: 301 KTFWEKSGHWDNYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMR 354

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF 
Sbjct: 355 LAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFH 414

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + V+LS RPEKR GSD +WD AE  ++  L          +  G L GEGAFYGPK EY
Sbjct: 415 DVSVRLSLRPEKRAGSDDVWDKAEQGLREALTACG------VEWGELPGEGAFYGPKIEY 468

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+GR WQCGT+Q+DF LP R +A YV  ++++  PVM+HRA+ GS+ERF+GI+IEN
Sbjct: 469 HVKDALGRSWQCGTLQLDFVLPERLDAEYVTENNDRARPVMLHRAILGSLERFVGILIEN 528

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G+ PLWL+P+Q ++  IT +  +Y +E+A  L++     E D RNE I YKIR++S  
Sbjct: 529 HAGSFPLWLAPVQMVIMNITENQADYCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQY 588

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           + P  I+ GDKE  E  + +R   +     + L D I  L +E  
Sbjct: 589 RFPYQIVIGDKEKQENKVAVR-RKAEDLGSLDLDDFIAQLQQEIT 632


>gi|300311294|ref|YP_003775386.1| threonyl-tRNA synthetase [Herbaspirillum seropedicae SmR1]
 gi|300074079|gb|ADJ63478.1| threonyl-tRNA synthetase protein [Herbaspirillum seropedicae SmR1]
          Length = 635

 Score =  701 bits (1809), Expect = 0.0,   Method: Composition-based stats.
 Identities = 313/643 (48%), Positives = 440/643 (68%), Gaps = 15/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +  PDGS + F    T + VA +I   LAK A+A  ++GK+ D S  + ++  + II
Sbjct: 1   MVSVRLPDGSQRQFDNPVTVAQVAANIGTGLAKAALAGRVDGKLVDTSYLIDKDAELSII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   L VIRHS AH++A AV+ ++PE QV IGP+I++GFYYDF  ++PF+ ++L  I
Sbjct: 61  TDKDADGLEVIRHSTAHLLAYAVKELFPEAQVTIGPVIDNGFYYDFSYKRPFTPEDLQAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EKKM E+  +D P  ++ L  ++A   F+S  E YK EI+ SIP  E+V+LY +G + DL
Sbjct: 121 EKKMAELAKKDEPVTRKVLPRDEAVAYFKSIGEDYKAEIIASIPQNEDVSLYTEGSFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG++K F KLMK+AGAYWRGDSN  ML R+YGTAW  +++   YL+ LEE+E
Sbjct: 181 CRGPHVPSTGKLKVF-KLMKLAGAYWRGDSNNEMLQRVYGTAWAKKEDQEAYLHMLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD 301
           KRDHRKL R +DLFH  ++  G+IFWH KGW I+Q +  YMRR  + + Y+E+  PQ+LD
Sbjct: 240 KRDHRKLGRALDLFHFQDEAPGLIFWHPKGWTIWQQVEQYMRRVYQDNGYQEVKAPQILD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+++GHW++YR NMF       T  + R +ALKPMNCPGH+ +FN GL SYR+LP+R
Sbjct: 300 RSLWEKTGHWENYRENMFT------TESENRAYALKPMNCPGHIQIFNSGLHSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
             EFG  +RNEPSG+LHG+MRVRGFTQDD H+FCT++Q+  E    + ++  +Y  FGF+
Sbjct: 354 YGEFGQCHRNEPSGALHGMMRVRGFTQDDGHIFCTEDQIQEEVAAFNRVVREVYDCFGFK 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
           ++ VKL+ RPEKR+G++ +WD AEN ++  +    +  ++      L GEGAFYGPK EY
Sbjct: 414 EVAVKLALRPEKRIGAEEVWDKAENALREAIRASGSEWEE------LPGEGAFYGPKIEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            LKD+IGR WQCGT+QVDF++P+R  A YV   + +  PVM+HRA+ GS+ERFI I+IEN
Sbjct: 468 HLKDSIGRSWQCGTMQVDFSMPARLGAEYVTEDNNRKVPVMLHRAIVGSLERFIAILIEN 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G +PLWL+P Q ++  I+ +  +Y Q +A  LK     +ETD RNE I YKIR+HSI+
Sbjct: 528 HAGAMPLWLAPTQVVILNISDAQADYVQNVAQTLKKQGFRVETDLRNEKITYKIRQHSIQ 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K P I++ GDKE    ++ +R  G+     +S+   +  L  E
Sbjct: 588 KPPYILVVGDKERDANTVAVRARGNVDLGVMSIDTLVERLKDE 630


>gi|269213639|ref|ZP_05982445.2| threonine--tRNA ligase [Neisseria cinerea ATCC 14685]
 gi|269145722|gb|EEZ72140.1| threonine--tRNA ligase [Neisseria cinerea ATCC 14685]
          Length = 643

 Score =  701 bits (1809), Expect = 0.0,   Method: Composition-based stats.
 Identities = 303/645 (46%), Positives = 442/645 (68%), Gaps = 16/645 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +T PDGS++ +    T + +A SI   LAK  VA  +NGK+ D  DP+  +  ++II
Sbjct: 7   MLNITLPDGSVRQYESPVTVAQIAASIGAGLAKATVAGKVNGKLVDACDPIAEDAHVQII 66

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TP+D   + +IRHSCAH++  AV+ ++P+ ++ IGP+IEDGFYYD   E+PF+ D++A I
Sbjct: 67  TPKDKEGVEIIRHSCAHLVGHAVKQLYPDAKMVIGPVIEDGFYYDIATEKPFTPDDVAAI 126

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M+E+IA+D   +K      +  ++F+ + E YK+ ++E +P  E + +Y   E+ D+
Sbjct: 127 EARMKELIAQDYDVIKVMTPRAETIKIFQDRGEEYKLRLIEDMPEVEAMGMYHHQEYVDM 186

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +T  +K F KL K+AGAYWRGDSN  ML R+YGTAW ++ EL  Y+  +EE+E
Sbjct: 187 CRGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRVYGTAWASKDELKAYIQRIEEAE 245

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL +++DLFH+ ++  G++FWH KGW ++Q +  +MR+++    Y+E+ TPQ++D
Sbjct: 246 KRDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMD 305

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           +  W++SGHW++Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+R
Sbjct: 306 KTFWEKSGHWENYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMR 359

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF 
Sbjct: 360 LAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVDEARAFNELLVRIYKQFGFH 419

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + VKLS RPE+R GSD +WD AE  ++  L          +    L GEGAFYGPK EY
Sbjct: 420 DVAVKLSLRPEQRAGSDEVWDKAEQGLRDALTACG------VEWEELPGEGAFYGPKIEY 473

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+GR WQCGT+Q+DF LP R NA YV   +++  PVM+HRA+ GS+ERFIGI+IEN
Sbjct: 474 HVKDALGRSWQCGTLQLDFVLPERLNAEYVTEKNDRARPVMLHRAILGSLERFIGILIEN 533

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G+ PLWL+P+Q ++  IT +  +Y +E+A  L++    +E D RNE I YKIR++S  
Sbjct: 534 HAGSFPLWLAPVQMVIMNITENQADYCREVAAKLQAAGFRVELDLRNEKIGYKIRDNSQY 593

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           + P  I+ GDKE  E  + +R   +     +++ D I  L +E  
Sbjct: 594 RFPYQIVVGDKEKQENKVAVR-RKAEDLGSLNVDDFIAQLQQEIT 637


>gi|312795972|ref|YP_004028894.1| Threonyl-tRNA synthetase [Burkholderia rhizoxinica HKI 454]
 gi|312167747|emb|CBW74750.1| Threonyl-tRNA synthetase (EC 6.1.1.3) [Burkholderia rhizoxinica HKI
           454]
          Length = 643

 Score =  701 bits (1808), Expect = 0.0,   Method: Composition-based stats.
 Identities = 307/644 (47%), Positives = 439/644 (68%), Gaps = 15/644 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           + I +  PDGSI+ +    T ++VA SI   LAK A+   I+G++ D S  ++ + ++ I
Sbjct: 8   AMISVRLPDGSIRQYDHPVTVAEVAASIGPGLAKAALGGKIDGELVDTSAVIQRDANVSI 67

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +T +DP  L +IRHS AH++A AV+ ++P+ QV IGP++++GFYYDF   + F+ ++L  
Sbjct: 68  VTDKDPEGLEIIRHSTAHLLAYAVKELFPQAQVTIGPVVDNGFYYDFAYHRAFTPEDLQS 127

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE++M E+  +D P  ++ +S ++A + F+   E YK EI+ESIP  E + LY  G + D
Sbjct: 128 IEQRMHELAKKDEPVSRRVVSRDEAVDYFKRIGERYKAEIIESIPQGEQIKLYSHGGFTD 187

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG++K F KLMK+AGAYWRGDS+   L RIYGTAW  ++E   YL+ LEE+
Sbjct: 188 LCRGPHVPSTGKLKVF-KLMKLAGAYWRGDSHNEQLQRIYGTAWARKEEQDAYLHMLEEA 246

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
           EKRDHRKL +++DLFH+ E+  G++FWH KGW ++Q +  Y+RR++ +  Y E+ TP ++
Sbjct: 247 EKRDHRKLGKQLDLFHLQEEAPGLVFWHPKGWALWQQVEQYLRRRLGEAGYLEVKTPMIM 306

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D+ LW++SGHW +YR NMF       T  + R +A+KPMNCPGHV VFNH L SYR+LP+
Sbjct: 307 DRSLWERSGHWQNYRENMFT------TESEKRDYAIKPMNCPGHVQVFNHSLHSYRDLPL 360

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R AEFGS +RNE SG+LHGLMRVRGF QDDAH+FCT++Q+  E +  ++L +S+YKDFGF
Sbjct: 361 RFAEFGSCHRNEASGALHGLMRVRGFVQDDAHIFCTEDQVIAESIAFNSLAMSVYKDFGF 420

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           E+I +KL+ RP++R G+D  WD AE  ++  L       Q+      L GEGAFYGPK E
Sbjct: 421 EQIDIKLALRPQQRAGTDETWDRAEQGLREALAACSLQWQE------LDGEGAFYGPKIE 474

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           Y +KDA+GR WQCGT+Q+DF LP R  A YV   + +  PVM+HRA+ GS+ERF+GI+IE
Sbjct: 475 YHIKDALGRSWQCGTLQLDFVLPERLGAEYVAEDNSRRRPVMLHRAIVGSMERFLGILIE 534

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +  G +PLWL+P Q +V  I  S+ +YA  +A  LK        D RNE I+YKIREH++
Sbjct: 535 HHAGAMPLWLAPSQVVVMNIAESSADYANIVAQSLKKQGFRAAADLRNEKISYKIREHAL 594

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +K+P + + GDKE   +++ +R  G      + +   +  L  E
Sbjct: 595 EKVPYLAVVGDKERDAQTVAVRARGGVDLGVMPVEAFLERLHNE 638


>gi|297544949|ref|YP_003677251.1| threonyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|296842724|gb|ADH61240.1| threonyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 634

 Score =  701 bits (1808), Expect = 0.0,   Method: Composition-based stats.
 Identities = 291/640 (45%), Positives = 412/640 (64%), Gaps = 16/640 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           LT  DG+ + F    T  ++A+SIS  LAK+AV    NGKV +L+  +  +G +EI+T +
Sbjct: 3   LTLKDGTQREFEKGITVYEIAKSISERLAKEAVGGKFNGKVVELNTKIEEDGKLEILTFD 62

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D     +  H+ +HI+A+AV+ ++ +V++AIGP I++GFYYDFD ++PF++++   IE++
Sbjct: 63  DEEGKKIYWHTSSHILAQAVKRLFKDVKLAIGPAIDNGFYYDFDTDRPFTTEDFEAIEQE 122

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M +II  D    +  L  +KA +L E K E YKVE+++ IP  E ++ Y+QGE+ DLC G
Sbjct: 123 MNKIIKEDYKLERFVLPKDKAIKLMEGKGEPYKVELIKEIPEGEEISFYKQGEFTDLCAG 182

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PH+ STG VK   KL+ VAGAYW+GD    ML RIYG ++  +  L +YL+ LEE++KRD
Sbjct: 183 PHLMSTGMVKTI-KLLSVAGAYWKGDEKNKMLQRIYGISFPKKSMLDEYLHMLEEAKKRD 241

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHL 304
           HRKL +E+DLF I  +G G  F+H KG  I   L  + R   +K  Y+EI TP +L++ L
Sbjct: 242 HRKLGKELDLFSIHPEGPGFPFFHPKGMIIRNILEDFWRKEHMKHGYQEIKTPIILNEEL 301

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHWD Y+ NM+       T  D  T+A+KPMNCPG + V+   + SYR+LP+RL E
Sbjct: 302 WRRSGHWDHYKENMYF------TEIDGETYAIKPMNCPGAMLVYKSTMHSYRDLPLRLCE 355

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
            G V+R+E SG LHGLMRVR FTQDDAH+F T EQ+ +E L + NL+   YK FGFE   
Sbjct: 356 LGLVHRHELSGVLHGLMRVRSFTQDDAHLFMTPEQVEDEILGVINLVDYFYKIFGFEYF- 414

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           V+LSTRPE  +GSD  W+ A N +   L+ +       +   V  G+GAFYGPK ++ LK
Sbjct: 415 VELSTRPENSMGSDEDWELATNALISALNRVN------LPYKVNEGDGAFYGPKIDFHLK 468

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D+IGR WQCGTIQ+DF +P RF   Y+    EK  P+M+HR ++GSIERFIGI+ E+F G
Sbjct: 469 DSIGRTWQCGTIQLDFQMPERFELEYIGPDGEKHRPIMLHRVIYGSIERFIGILTEHFAG 528

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P WL+P+Q  V  I+     YAQ +   L  + +  E D RNE + YKIRE  ++KIP
Sbjct: 529 AFPTWLAPVQVRVLPISDKHYAYAQNVYGRLLENDIRAELDDRNEKVGYKIREAQLQKIP 588

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            ++I GDKE  + ++ +R         +SL + I  + KE
Sbjct: 589 YMLIVGDKEVEQGTVSLRSRREGDLGAISLSEFIEKILKE 628


>gi|325133766|gb|EGC56422.1| threonyl-tRNA synthetase [Neisseria meningitidis M13399]
 gi|325144077|gb|EGC66385.1| threonyl-tRNA synthetase [Neisseria meningitidis M01-240013]
 gi|325206438|gb|ADZ01891.1| threonyl-tRNA synthetase [Neisseria meningitidis M04-240196]
          Length = 637

 Score =  701 bits (1808), Expect = 0.0,   Method: Composition-based stats.
 Identities = 305/645 (47%), Positives = 443/645 (68%), Gaps = 16/645 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +T PDGS++ +    T + +A SI   LA+ AVA  +NGK+ D  DP+  + +++II
Sbjct: 1   MLNITLPDGSVRQYESPVTVAQIAASIGVGLARAAVAGRVNGKLVDACDPIVEDSAVQII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TP+D   + +I HSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A I
Sbjct: 61  TPKDQEGIEIICHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M+E+IA+D   +K      +A ++F+ + E YK+ +++ +P  E + +Y   E+ D+
Sbjct: 121 EARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLIDDMPEVEAMGMYHHQEYVDM 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+E
Sbjct: 181 CRGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKAYIQRIEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL +++DLFH+ ++  G++FWH KGW ++Q +  +MR+++    Y+E+ TPQ++D
Sbjct: 240 KRDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           +  W++SGHWD+Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+R
Sbjct: 300 KTFWEKSGHWDNYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF 
Sbjct: 354 LAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFH 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + VKLS RPEKR GSD +WD AE  ++  L          +  G L GEGAFYGPK EY
Sbjct: 414 DVSVKLSLRPEKRAGSDDVWDKAEQGLREALTACG------VEWGELPGEGAFYGPKIEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            ++DA+GR WQCGT+Q+DF LP R NA YV  ++++  PVM+HRA+ GS+ERFIGI+IEN
Sbjct: 468 HVRDALGRSWQCGTLQLDFVLPERLNAEYVTENNDRARPVMLHRAILGSLERFIGILIEN 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G+ PLWL+P+Q ++  IT +  +Y +E+A  L++     E D RNE I YKIR++S  
Sbjct: 528 HAGSFPLWLAPVQMVIMNITENQADYCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQY 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           + P  I+ GDKE  E  + +R   +     + L D I  L +E  
Sbjct: 588 RFPYQIVVGDKEKQENKVAVR-RKAEDLGSLDLDDFIAQLQQEIT 631


>gi|268603124|ref|ZP_06137291.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
 gi|268587255|gb|EEZ51931.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
          Length = 637

 Score =  701 bits (1808), Expect = 0.0,   Method: Composition-based stats.
 Identities = 304/645 (47%), Positives = 443/645 (68%), Gaps = 16/645 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +T PD S++ +    T + +A SI   LAK AVA  +NGK+ D  DP+  + +++II
Sbjct: 1   MLNITLPDCSVRQYESPVTVAQIAASIGAGLAKAAVAGKVNGKLVDACDPIVEDSAVQII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TP+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A I
Sbjct: 61  TPKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M+E+IA+D   +K      +A ++F+ + E YK+ +++ +P  E + +Y   E+ D+
Sbjct: 121 EARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLIDDMPEVEAMGMYHHQEYVDM 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+E
Sbjct: 181 CRGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKDYIQRIEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL +++DLFH+ ++  G++FWH KGW ++Q +  +MR+++    Y+E+ TPQ++D
Sbjct: 240 KRDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           +  W++SGHWD+Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+R
Sbjct: 300 KTFWEKSGHWDNYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF 
Sbjct: 354 LAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFH 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + V+LS RPEKR GSD +WD AE  ++  L          +  G L GEGAFYGPK EY
Sbjct: 414 DVSVRLSLRPEKRAGSDDVWDKAEQGLREALTACG------VEWGELPGEGAFYGPKIEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+GR WQCGT+Q+DF LP R +A YV  ++++  PVM+HRA+ GS+ERF+GI+IEN
Sbjct: 468 HVKDALGRSWQCGTLQLDFVLPERLDAEYVTENNDRARPVMLHRAILGSLERFVGILIEN 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G+ PLWL+P+Q ++  IT +  +Y +E+A  L++     E D RNE I YKIR++S  
Sbjct: 528 HAGSFPLWLAPVQMVIMNITENQADYCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQY 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           + P  I+ GDKE  E  + +R   +     + L D I  L +E  
Sbjct: 588 RFPYQIVIGDKEKQENKVAVR-RKAEDLGSLDLDDFIAQLQQEIT 631


>gi|240127689|ref|ZP_04740350.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae
           SK-93-1035]
          Length = 648

 Score =  701 bits (1808), Expect = 0.0,   Method: Composition-based stats.
 Identities = 306/645 (47%), Positives = 444/645 (68%), Gaps = 16/645 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +T PD S++ +    T + +A SI   LAK AVA  +NGK+ D  DP+  + +++II
Sbjct: 12  MLNITLPDCSVRQYESPVTVAQIAASIGAGLAKAAVAGKVNGKLVDACDPIVEDSAVQII 71

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TP+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A I
Sbjct: 72  TPKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAI 131

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M+E+IA+D   +K      +A ++F+ + E YK+ +++ +P  E + +Y   E+ D+
Sbjct: 132 EARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLIDDMPEVEAMGIYHHQEYVDM 191

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+E
Sbjct: 192 CRGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKAYIQRIEEAE 250

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL +++DLFH+ ++  G++FWH KGW ++QT+  +MR+++    Y+E+ TPQ++D
Sbjct: 251 KRDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQTIEQHMRKELNAAGYKEVKTPQIMD 310

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           +  W++SGHWD+Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+R
Sbjct: 311 KTFWEKSGHWDNYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMR 364

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF 
Sbjct: 365 LAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFH 424

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + V+LS RPEKR GSD +WD AE  ++  L          +  G L GEGAFYGPK EY
Sbjct: 425 DVSVRLSLRPEKRAGSDDVWDKAEQGLREALTACG------VEWGELPGEGAFYGPKIEY 478

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+GR WQCGT+Q+DF LP R +A YV  ++++  PVM+HRA+ GS+ERFIGI+IEN
Sbjct: 479 HVKDALGRSWQCGTLQLDFVLPERLDAEYVTENNDRARPVMLHRAILGSLERFIGILIEN 538

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G+ PLWL+P+Q ++  IT +  +Y +E+A  L++     E D RNE I YKIR++S  
Sbjct: 539 HAGSFPLWLAPVQMVIMNITENQADYCREVAAKLQAADFRAELDLRNEKIGYKIRDNSQY 598

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           + P  I+ GDKE  E  + +R   +     + L D I  L +E  
Sbjct: 599 RFPYQIVIGDKEKQENKVAVR-RKAEDLGSLDLDDFIAQLQQEIT 642


>gi|268596339|ref|ZP_06130506.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|268550127|gb|EEZ45146.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
          Length = 638

 Score =  701 bits (1808), Expect = 0.0,   Method: Composition-based stats.
 Identities = 306/645 (47%), Positives = 444/645 (68%), Gaps = 16/645 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +T PD S++ +    T + +A SI   LAK AVA  +NGK+ D  DP+  + +++II
Sbjct: 2   MLNITLPDCSVRQYESPVTVAQIAASIGAGLAKAAVAGKVNGKLVDACDPIVEDSAVQII 61

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TP+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A I
Sbjct: 62  TPKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M+E+IA+D   +K      +A ++F+ + E YK+ +++ +P  E + +Y   E+ D+
Sbjct: 122 EARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLIDDMPEVEAMGIYHHQEYVDM 181

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+E
Sbjct: 182 CRGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKDYIQRIEEAE 240

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL +++DLFH+ ++  G++FWH KGW ++QT+  +MR+++    Y+E+ TPQ++D
Sbjct: 241 KRDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQTIEQHMRKELNAAGYKEVKTPQIMD 300

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           +  W++SGHWD+Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+R
Sbjct: 301 KTFWEKSGHWDNYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMR 354

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF 
Sbjct: 355 LAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFH 414

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + V+LS RPEKR GSD +WD AE  ++  L          +  G L GEGAFYGPK EY
Sbjct: 415 DVSVRLSLRPEKRAGSDDVWDKAEQGLREALTACG------VEWGELPGEGAFYGPKIEY 468

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+GR WQCGT+Q+DF LP R +A YV  ++++  PVM+HRA+ GS+ERFIGI+IEN
Sbjct: 469 RVKDALGRSWQCGTLQLDFVLPERLDAEYVTENNDRARPVMLHRAILGSLERFIGILIEN 528

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G+ PLWL+P+Q ++  IT +  +Y +E+A  L++     E D RNE I YKIR++S  
Sbjct: 529 HAGSFPLWLAPVQMVIMNITENQADYCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQY 588

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           + P  I+ GDKE  E  + +R   +     + L D I  L +E  
Sbjct: 589 RFPYQIVIGDKEKQENKVAVR-RKAEDLGSLDLDDFIAQLQQEIT 632


>gi|241758603|ref|ZP_04756718.1| threonine--tRNA ligase [Neisseria flavescens SK114]
 gi|241321255|gb|EER57427.1| threonine--tRNA ligase [Neisseria flavescens SK114]
          Length = 637

 Score =  700 bits (1807), Expect = 0.0,   Method: Composition-based stats.
 Identities = 304/645 (47%), Positives = 443/645 (68%), Gaps = 16/645 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEII 62
            + +T PDGS++ +    T + +A SI   LAK  VA  +NGK+ D  DP+ E + ++II
Sbjct: 1   MLNITLPDGSVRQYESPVTVAQIAASIGAGLAKATVAGKVNGKLVDACDPITEDAHVQII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TP+D   + +IRHSCAH++  AV+ ++P+ ++ IGP+IEDGFYYD   E+PF+ D++A I
Sbjct: 61  TPKDKEGVEIIRHSCAHLVGHAVKQLYPDAKMVIGPVIEDGFYYDIATEKPFTPDDVAAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M+E+IA+D   +K      +  ++F+ + E YK+ ++E +P  E + +Y   E+ D+
Sbjct: 121 EARMKELIAQDYDVIKVMTPRAETVKIFQDRGEEYKLRLIEDMPEVEAMGMYHHQEYVDM 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +T  +K F KL K+AGAYWRGDSN  ML R+YGTAW ++ EL  Y+  +EE+E
Sbjct: 181 CRGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRVYGTAWASKDELKAYIQRIEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD 301
           KRDHRKL +++DLFH+ ++  G++FWH KGW ++Q +  +MR+++    Y+E+ TPQ++D
Sbjct: 240 KRDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQVIEQHMRKELNVAGYKEVKTPQIMD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           +  W++SGHW++Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+R
Sbjct: 300 KTFWEKSGHWENYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF 
Sbjct: 354 LAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVDEARAFNELLVRIYKQFGFH 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + VKLS RPE+R GSD +WD AE  ++  L          +    L GEGAFYGPK EY
Sbjct: 414 DVAVKLSLRPEQRAGSDEVWDKAEQGLRDALTACG------VEWEELPGEGAFYGPKIEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+GR WQCGT+Q+DF LP R NA YV  ++++  PVM+HRA+ GS+ERFIGI+IEN
Sbjct: 468 HVKDALGRSWQCGTLQLDFVLPERLNAEYVTENNDRARPVMLHRAILGSLERFIGILIEN 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G+ PLWL+P+Q ++  IT +  +Y +E+A  L++    +E D RNE I YKIR++S  
Sbjct: 528 HAGSFPLWLAPVQMVIMNITENQADYCREVAVKLQAAGFRVELDLRNEKIGYKIRDNSQY 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           + P  I+ GDKE  E  + +R   +     + + D I  L +E  
Sbjct: 588 RFPYQIVVGDKEKQENKVAVR-RKAEDLGSLDVDDFIAQLQQEIT 631


>gi|91776355|ref|YP_546111.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Methylobacillus
           flagellatus KT]
 gi|123254150|sp|Q1GZR7|SYT_METFK RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|91710342|gb|ABE50270.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Methylobacillus
           flagellatus KT]
          Length = 635

 Score =  700 bits (1807), Expect = 0.0,   Method: Composition-based stats.
 Identities = 311/646 (48%), Positives = 442/646 (68%), Gaps = 18/646 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
           MP    +  PDGS + F    T ++VA +I   LA+ A+   +NGK  D S  + + + +
Sbjct: 1   MPV---IRLPDGSERKFDGPVTVAEVAMNIGAGLARAALGGKVNGKAVDTSYLITDDADL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT  D   LA+IRHS AH++A+AV+ ++P+ QV IGP+IE+GFYYDF  ++PF+ ++L
Sbjct: 58  SIITDRDAEGLAIIRHSTAHLLAQAVKQLFPDAQVTIGPVIENGFYYDFSYKRPFTPEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IE +MQE+  RD P ++  +  ++A   F+S  E YK EI+ SIPA + ++LY Q ++
Sbjct: 118 QKIEARMQELAKRDIPIVRTVMERDEAVAYFQSIGEQYKAEIIGSIPADQEISLYTQDDF 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRG HV STG++K F KLMKVAGAYWRGDSN  ML RIYGTAW  +++L  YL+ LE
Sbjct: 178 TDLCRGTHVPSTGKLKAF-KLMKVAGAYWRGDSNNEMLQRIYGTAWAKKEDLDAYLHMLE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+EKRDHRKL R++D FH+ ++  G++FWH +GW I+Q +  YMR   ++  Y+E+ TP 
Sbjct: 237 EAEKRDHRKLGRQLDFFHMQDEAPGMVFWHPRGWVIWQEVEQYMRNMFREFGYQEVRTPT 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D+ +W++SGHW +Y  NMF       T  + R +A+KPMNCPGH+ +FN  L SYR+L
Sbjct: 297 IMDRVMWEKSGHWQNYHDNMFT------TASENRDYAVKPMNCPGHIQIFNSTLHSYRDL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT++Q+ +E      ++   YKDF
Sbjct: 351 PLRLAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEDQVKDEVADFIVMLYKAYKDF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF +++VKLSTRPEKRVG+D  WD AE  +   L       Q+ ++  +  GEGAFYGPK
Sbjct: 411 GFNEVLVKLSTRPEKRVGTDEAWDKAEEALAVAL------RQNNLDFELQPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD++GR WQCGTIQ+DFNLP R  A YV+  + + HPVM+HRA+ GS+ERF+GI+
Sbjct: 465 IEFTLKDSLGRLWQCGTIQLDFNLPERLGAEYVDEDNSRKHPVMLHRAIVGSMERFLGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IEN+ G +P WL+P+QA+V  I+    +Y   +   L+ +   +++D RNE I YKIREH
Sbjct: 525 IENYAGAMPAWLAPVQAMVLNISDGQADYVSSVVAELRKNGFRVDSDLRNEKITYKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           S++K+P ++I G++E     + +R         + L   I  L  +
Sbjct: 585 SLQKLPYLLIAGEREMQTGQVAVRTRKGEDLGSMPLSAFIERLKSD 630


>gi|268686074|ref|ZP_06152936.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
 gi|268626358|gb|EEZ58758.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
          Length = 637

 Score =  700 bits (1806), Expect = 0.0,   Method: Composition-based stats.
 Identities = 306/645 (47%), Positives = 444/645 (68%), Gaps = 16/645 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +T PD S++ +    T + +A SI   LAK AVA  +NGK+ D  DP+  + +++II
Sbjct: 1   MLNITLPDCSVRQYESPVTVAQIAASIGAGLAKAAVAGKVNGKLVDACDPIVEDSAVQII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TP+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A I
Sbjct: 61  TPKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M+E+IA+D   +K      +A ++F+ + E YK+ +++ +P  E + +Y   E+ D+
Sbjct: 121 EARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLIDDMPEVEAMGIYHHQEYVDM 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+E
Sbjct: 181 CRGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKAYIQRIEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL +++DLFH+ ++  G++FWH KGW ++QT+  +MR+++    Y+E+ TPQ++D
Sbjct: 240 KRDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQTIEQHMRKELNAAGYKEVKTPQIMD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           +  W++SGHWD+Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+R
Sbjct: 300 KTFWEKSGHWDNYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF 
Sbjct: 354 LAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFH 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + V+LS RPEKR GSD +WD AE  ++  L          +  G L GEGAFYGPK EY
Sbjct: 414 DVSVRLSLRPEKRAGSDDVWDKAEQGLREALTACG------VEWGELPGEGAFYGPKIEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+GR WQCGT+Q+DF LP R +A YV  ++++  PVM+HRA+ GS+ERFIGI+IEN
Sbjct: 468 HVKDALGRSWQCGTLQLDFVLPERLDAEYVTENNDRARPVMLHRAILGSLERFIGILIEN 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G+ PLWL+P+Q ++  IT +  +Y +E+A  L++     E D RNE I YKIR++S  
Sbjct: 528 HAGSFPLWLAPVQMVIMNITENQADYCREVAAKLQAADFRAELDLRNEKIGYKIRDNSQY 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           + P  I+ GDKE  E  + +R   +     + L D I  L +E  
Sbjct: 588 RFPYQIVIGDKEKQENKVAVR-RKAEDLGSLDLDDFIAQLQQEIT 631


>gi|167629857|ref|YP_001680356.1| threonyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
 gi|167592597|gb|ABZ84345.1| threonyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
          Length = 641

 Score =  700 bits (1806), Expect = 0.0,   Method: Composition-based stats.
 Identities = 285/646 (44%), Positives = 420/646 (65%), Gaps = 16/646 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           M + +K+T  DG+++ FP   T + VAE++SR LA+ AVA  ++GK+  L+ P+  +  +
Sbjct: 1   MSNIVKVTLKDGAVREFPQGTTVAAVAEALSRKLAQHAVAGKLDGKMVGLTTPIEKDAEL 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EI+T +DP    V RHS +H++A+AVQ  +P  ++ IGP IE+GFYYDFD E  F+ ++L
Sbjct: 61  EILTFDDPEGREVYRHSSSHLLAQAVQRRFPGTKLGIGPAIENGFYYDFDAEHKFTPEDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEK+M  I+  D P  +Q +S E+A   FE + E YKVE+++ +P    +++Y QG++
Sbjct: 121 EAIEKEMAHIVKADYPITRQEVSREEAIRFFEERGEMYKVELVKDLPEDAVISMYSQGDF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLC GPH+ STGQ+K F KLM +AGAYWRG     ML RIYGT++  + EL ++L  +E
Sbjct: 181 VDLCAGPHLPSTGQIKAF-KLMNLAGAYWRGSEKNKMLQRIYGTSFPKKAELDEHLRRIE 239

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+++RDHR++ +E++L+ I E+G G  F+  KG  I   L ++ R +  +  Y E+ TP 
Sbjct: 240 EAKRRDHRRIGQELELYTILEEGPGFPFFFPKGMIIRNELENFWREEHARAGYREVRTPI 299

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L++ LW++SGHW +YR NM+  +       D   + +KPMNCPG + V+   + SYR+L
Sbjct: 300 ILNRSLWERSGHWANYRENMYVTQI------DEEDYCVKPMNCPGGMLVYKQAIHSYRDL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+ E G V+R+E SG+LHGLMRVR FTQDDAH+F T  Q+ +E + +  LI  +YK F
Sbjct: 354 PLRMGELGLVHRHEISGALHGLMRVRCFTQDDAHIFMTPGQIKDEIIGVIELIDRMYKTF 413

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF    V+LST+PEK +GSD +W+ A N ++  L          ++  +  G+GAFYGPK
Sbjct: 414 GFAYH-VELSTKPEKAMGSDEIWELATNSLEEALKA------KGMDYKINPGDGAFYGPK 466

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++ LKD IGR WQCGTIQ+DF +P RF+  YV    +K  PVMIHR VFGSIERFIGI+
Sbjct: 467 IDFHLKDCIGRTWQCGTIQLDFQMPERFDLTYVGEDGQKHRPVMIHRVVFGSIERFIGIL 526

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
            E++ G  P WL+P+QA V  IT    EYA  + + L    + +E D RNE I YKIRE 
Sbjct: 527 TEHYAGAFPTWLAPVQARVLPITDRHHEYAASVRSALAKQGVRVEVDGRNEKIGYKIREG 586

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            ++KIP +++ GDKEA   ++ +R+ G      ++L     ++ +E
Sbjct: 587 QVQKIPYLLVVGDKEAENGAVAVRKRGEGDKGAMALDAFAAMILEE 632


>gi|148261186|ref|YP_001235313.1| threonyl-tRNA synthetase [Acidiphilium cryptum JF-5]
 gi|166223313|sp|A5G0L2|SYT_ACICJ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|146402867|gb|ABQ31394.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Acidiphilium
           cryptum JF-5]
          Length = 640

 Score =  700 bits (1806), Expect = 0.0,   Method: Composition-based stats.
 Identities = 329/653 (50%), Positives = 461/653 (70%), Gaps = 15/653 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP+   +T PDGS++++P   TG+++A SI   LAK A+A+ ++GK+ DLS  +  +  +
Sbjct: 1   MPA---ITLPDGSVRDYPGPVTGTEIAASIGPGLAKAALAMEVDGKMMDLSRTLDADARL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
             IT  D  SL +IRH  AH+MAEAVQ+++P  QV IGP IE GFYYDF + +PF+ D+L
Sbjct: 58  RFITRRDADSLELIRHDAAHVMAEAVQALYPGTQVTIGPAIEGGFYYDFFRNEPFTPDDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IE KM+EIIA ++PF ++    ++A   FE++ E +K E++  +PA E +T+YRQG+W
Sbjct: 118 PAIEAKMREIIAANAPFTREVWDRDEAIRFFEARGERFKAELIRDLPASETITIYRQGDW 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPH+R TG +   FKL KVAGAYWRGD   PMLSRIYGTAW  Q+EL  +L  LE
Sbjct: 178 LDLCRGPHMRGTGDIGGAFKLTKVAGAYWRGDHRNPMLSRIYGTAWRDQKELDAHLKQLE 237

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E+RDHRK+ R+MDLFH+ E+  G +FWH KGW++++T+ +YMRR+ ++  Y E+ TPQ
Sbjct: 238 EAERRDHRKIGRQMDLFHMQEEAVGSVFWHEKGWRLYRTVEAYMRRRQEEFGYIEVRTPQ 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +LD+ LW+ SGHWD+YR++MF  +  D+     +  A+KPMNCP HV +FNHGL+SYREL
Sbjct: 298 LLDRKLWEASGHWDNYRSHMFIAEVEDED----KVLAVKPMNCPCHVQIFNHGLRSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG+ +R EPSG+LHG+MRVR F QDDAH+FCT++Q+ +E ++   ++  +Y DF
Sbjct: 354 PLRMAEFGACHRYEPSGALHGIMRVRAFAQDDAHIFCTEDQIADETVRFVEMLRRVYADF 413

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF +  VK + RP  R GSD +WD AE  ++   +T        +   V  GEGAFYGPK
Sbjct: 414 GFPEFAVKFADRPTPRSGSDEVWDKAEAALRSACETAG------VEFTVNPGEGAFYGPK 467

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E++L+DAIGRDWQCGT+QVDF LP R +A YV + S +  PVM+HRA+ GS ERFIGI+
Sbjct: 468 LEFVLRDAIGRDWQCGTLQVDFVLPERLDASYVTAESGRARPVMLHRAIVGSFERFIGIL 527

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IEN  G  PLWL+P QA V +I + A +YA+ +A  LK   L++ TD RNE IN K+R+ 
Sbjct: 528 IENCAGRFPLWLAPTQAAVASIVTDANDYAETVAARLKEAGLAVATDTRNEKINAKVRDL 587

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           S+  +P I++ G +EA ++++ IRR GS     ++L +AI  L  E+ PPD +
Sbjct: 588 SLALVPNILVVGRREAEQQTVSIRRLGSDKQDSMTLDEAIATLKAEATPPDLR 640


>gi|326404590|ref|YP_004284672.1| threonyl-tRNA synthetase [Acidiphilium multivorum AIU301]
 gi|325051452|dbj|BAJ81790.1| threonyl-tRNA synthetase [Acidiphilium multivorum AIU301]
          Length = 640

 Score =  699 bits (1805), Expect = 0.0,   Method: Composition-based stats.
 Identities = 328/653 (50%), Positives = 461/653 (70%), Gaps = 15/653 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP+   +T PDGS++++P   TG+++A SI   LAK A+A+ ++GK+ DLS  +  +  +
Sbjct: 1   MPA---ITLPDGSVRDYPGPVTGTEIAASIGPGLAKAALAMEVDGKMMDLSRTLDADARL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
             IT  D  SL +IRH  AH+MAEAVQ+++P  QV IGP IE GFYYDF + +PF+ D+L
Sbjct: 58  RFITRRDADSLELIRHDAAHVMAEAVQALYPGTQVTIGPAIEGGFYYDFFRNEPFTPDDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IE KM+EIIA ++PF ++    ++A   FE++ E +K E++  +PA E +T+YRQG+W
Sbjct: 118 PAIEAKMREIIAANAPFTREVWDRDEAIRFFEARGERFKAELIRDLPASETITIYRQGDW 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPH+R TG +   FKL KVAGAYWRGD   PMLSRIYGTAW  Q+EL  +L  LE
Sbjct: 178 LDLCRGPHMRGTGDIGGAFKLTKVAGAYWRGDHRNPMLSRIYGTAWRDQKELDAHLKQLE 237

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E+RDHRK+ R+MDLFH+ E+  G +FWH KGW++++T+ +YMRR+ ++  Y E+ TPQ
Sbjct: 238 EAERRDHRKIGRQMDLFHMQEEAVGSVFWHEKGWRLYRTVEAYMRRRQEEFGYIEVRTPQ 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +LD+ LW+ SGHWD+YR++MF  +  D+     +  A+KPMNCP HV +FNHGL+SYREL
Sbjct: 298 LLDRKLWEASGHWDNYRSHMFIAEVEDED----KVLAVKPMNCPCHVQIFNHGLRSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG+ +R EPSG+LHG+MRVR F QDDAH+FCT++Q+ +E ++   ++  +Y DF
Sbjct: 354 PLRMAEFGACHRYEPSGALHGIMRVRAFAQDDAHIFCTEDQIADETVRFVEMLRRVYADF 413

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF +  VK + RP  R GSD +WD AE  ++   +T        +   V  GEGAFYGPK
Sbjct: 414 GFPEFAVKFADRPTPRSGSDEVWDKAEAALRSACETAG------VTFTVNPGEGAFYGPK 467

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E++L+DAIGRDWQCGT+QVDF LP R +A YV + S +  PVM+HRA+ GS ERFIGI+
Sbjct: 468 LEFVLRDAIGRDWQCGTLQVDFVLPERLDASYVTAESGRARPVMLHRAIVGSFERFIGIL 527

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IEN  G  PLWL+P QA V +I + A +YA+ +A  LK   L++ TD RNE IN K+R+ 
Sbjct: 528 IENCAGRFPLWLAPTQAAVASIVTDANDYAETVAAKLKEAGLAVATDTRNEKINAKVRDL 587

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           S+  +P I++ G +EA ++++ IRR GS     ++L +A+  L  E+ PPD +
Sbjct: 588 SLALVPNILVVGRREAEQQTVSIRRLGSDKQDSMTLDEAVATLKAEATPPDLR 640


>gi|294670480|ref|ZP_06735360.1| hypothetical protein NEIELOOT_02198 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291307759|gb|EFE49002.1| hypothetical protein NEIELOOT_02198 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 637

 Score =  699 bits (1805), Expect = 0.0,   Method: Composition-based stats.
 Identities = 305/643 (47%), Positives = 442/643 (68%), Gaps = 16/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +T PDGS++ +    T + +A SI   LAK  VA  +NGK+ D  DP+  + +++II
Sbjct: 1   MLNITLPDGSVRQYESPVTVAQIAASIGAGLAKATVAGKVNGKLVDACDPITEDSTVQII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TP+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A I
Sbjct: 61  TPKDQEGVEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M+E+IA+D   +K      +  ++F+ + E YK+ ++E +P  E + +Y   E+ D+
Sbjct: 121 EARMKELIAQDYDVIKIMTPRAETIKIFQDRGEEYKLRLIEDMPEVEAMGMYYHQEYVDM 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+E
Sbjct: 181 CRGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKAYIQRIEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL +++DLFH+ ++  G++FWH KGW ++QT+  +MR+++    Y+E+ TPQ++D
Sbjct: 240 KRDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQTIEQHMRKELNAAGYKEVKTPQIMD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           +  W++SGHWD+Y+ NMF       T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+R
Sbjct: 300 KTFWEKSGHWDNYKDNMFV------TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E    + L++ IYK FGF 
Sbjct: 354 LAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFH 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + VKLS RPEKR GS+ +WD AE  ++  L          +    L GEGAFYGPK EY
Sbjct: 414 DVSVKLSLRPEKRAGSNDVWDKAEQGLREALTACG------VEWDELPGEGAFYGPKIEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+GR WQCGT+Q+DF LP R +A YV  ++++  PVM+HRA+ GS+ERFIGI+IEN
Sbjct: 468 HVKDALGRSWQCGTLQLDFVLPERLDAEYVTENNDRARPVMLHRAILGSLERFIGILIEN 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G+ PLWL+P Q ++  IT +  +Y +E+A  L++    +E D RNE I YKIR++S  
Sbjct: 528 HAGSFPLWLAPAQMVIMNITENQADYCREVAAKLQAAGFRVELDLRNEKIGYKIRDNSQY 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           + P  I+ GDKE  E  + +R   +     + L D I  L +E
Sbjct: 588 RFPYQIVVGDKEKQENKVAVR-RKAEDLGSLDLDDFIAQLQQE 629


>gi|121997230|ref|YP_001002017.1| threonyl-tRNA synthetase [Halorhodospira halophila SL1]
 gi|166223346|sp|A1WU53|SYT_HALHL RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|121588635|gb|ABM61215.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Halorhodospira
           halophila SL1]
          Length = 640

 Score =  699 bits (1804), Expect = 0.0,   Method: Composition-based stats.
 Identities = 310/646 (47%), Positives = 438/646 (67%), Gaps = 18/646 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP+   +T PDGS+K F    T  ++AESI R LAK A+   ++G++ DL  P+  +  +
Sbjct: 1   MPA---ITLPDGSVKAFDHPVTTREIAESIGRKLAKDAIVGRVDGELIDLDRPIEHDAYV 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EI+T  DP  L VIRHS AH+MA+AV+ + PE+QV IGP +++GFYYDF  E+  S DEL
Sbjct: 58  EIVTSNDPDGLEVIRHSTAHLMAQAVKQLHPEMQVTIGPTVDNGFYYDFAGERSLSEDEL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IE++M E+   D P  ++    E AR+ F  + E YK +I++ +P  E +T+YRQG++
Sbjct: 118 ETIEQRMSELAEADHPVEREVWDREAARQFFLEQGETYKAQIIDDLPESETITVYRQGDF 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV STG++K F KL KVAGAYWRGD N  ML R+YGTAW  +++L  YL  L 
Sbjct: 178 ADLCRGPHVPSTGKLKAF-KLTKVAGAYWRGDQNNEMLQRVYGTAWPDRKQLKAYLDRLA 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+E+RDHR+L R  DLFH+ E+  G++FWH +GW+++  +  Y+RR ++ + Y+EI+TP 
Sbjct: 237 EAERRDHRRLGRTQDLFHVQEESPGMVFWHPRGWRLYLEVQDYIRRLMRDNGYQEIHTPM 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D+ LW++SGHW  +  NMF       T  + R +A+KPMNCP HV VF  GLKSYR+L
Sbjct: 297 LVDRSLWERSGHWAMFAENMFV------TESESRDYAVKPMNCPCHVEVFKQGLKSYRDL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT+ Q+  E     +L+   Y+DF
Sbjct: 351 PLRLAEFGSCHRNEPSGTLHGLMRVRGFVQDDAHIFCTENQIQEEVRTFIDLVYRAYRDF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE +++ LSTRP++RVG DALWD AE+ +   L+T        ++  +  GEGAFYGPK
Sbjct: 411 GFEDVLIALSTRPDERVGDDALWDKAESALATALET------HGLDYTLQPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ L+D + R WQ GTIQVDF++P R  A +V+   E+  PVM+HRA+ GS+ERFIGI+
Sbjct: 465 IEFSLRDCLERVWQLGTIQVDFSMPGRLGAQFVDDDGERRTPVMLHRAILGSLERFIGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE++ G LP WL+P+QA+V  IT    +YA+ +   L       E D RNE I YKIREH
Sbjct: 525 IEHYGGALPTWLAPVQAVVLNITDRQADYARSVEQQLLESGFRAEADLRNEKIGYKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +++K+P +++ GD+E    ++ +R    T    + L + +  L+ +
Sbjct: 585 TLQKVPYMLVLGDRELESGTVAVRHRDGTDLGSMELEELVARLSND 630


>gi|302381720|ref|YP_003817543.1| threonyl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264]
 gi|302192348|gb|ADK99919.1| threonyl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264]
          Length = 639

 Score =  699 bits (1803), Expect = 0.0,   Method: Composition-based stats.
 Identities = 332/650 (51%), Positives = 449/650 (69%), Gaps = 13/650 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEII 62
            I+LTFPDG+ + +P  +T  DVA +IS SLAKKAV   +NG+  DL+  +  G S  +I
Sbjct: 1   MIQLTFPDGATREYPAGSTARDVAHAISPSLAKKAVLAELNGEQRDLNRVLETGGSFRLI 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
             +DP +L  IRH  AH++AEAVQ+++P  QV IGP IEDGFYYDF +E PFS+D+ A I
Sbjct: 61  MRDDPEALYTIRHDTAHVLAEAVQTLFPGTQVTIGPAIEDGFYYDFFRETPFSTDDFAAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M  I+ RD+ F ++    ++A   FE+K E +K E++  +P  + +TLY+QG+W DL
Sbjct: 121 EKEMSRIVDRDAKFEREVWDRDEAITFFEAKGEKFKAELIRDLPGDQTITLYKQGDWIDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH  ST  V K FKL K+AGAYWRGDSNR  L RIYGTAW T+ +L  YL  +EE+E
Sbjct: 181 CRGPHFPSTKSVGKAFKLTKLAGAYWRGDSNREQLQRIYGTAWATKDDLDAYLLRIEEAE 240

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL R+M+LFH+ E+G G++FWH KGW ++Q + +YMRR++    Y E+ TPQVLD
Sbjct: 241 KRDHRKLGRQMELFHMQEEGRGMVFWHPKGWILWQVIEAYMRRRLDAAGYVEVKTPQVLD 300

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           +  W+ SGHW+ YR NMF  +       +  T +LKPMNCPGHV +F  G +SYRELP+R
Sbjct: 301 RKFWEASGHWEKYRPNMFVCETV-----EGETLSLKPMNCPGHVQIFGIGQRSYRELPLR 355

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AEFG+ +R EPSG+LHGLMRVRGFTQDDAH+FC ++Q+  E  +   L   ++ D G +
Sbjct: 356 MAEFGACHRYEPSGALHGLMRVRGFTQDDAHIFCREDQIVEETRRFIELTRIVHADLGMQ 415

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              + L+TRP+ R GSD  WD AE ++              ++  +  G+GAFY PK ++
Sbjct: 416 TAYINLATRPDVRAGSDEFWDKAEGMLGEAARLAG------VDPVIAEGDGAFYAPKLDF 469

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
           ++KDAIGR+W CGT+Q+D+ LP R NA YV    +K  PVM+HRA+ GS ERFIGIMIEN
Sbjct: 470 VVKDAIGREWTCGTLQLDYVLPERLNAEYVGEDGQKHRPVMLHRAILGSFERFIGIMIEN 529

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  PLWL+P+QA+V TITS A  YA+E+A   K+  L +ETD RNE + YK+REHS+ 
Sbjct: 530 YAGAFPLWLAPVQAVVATITSDADGYAEEVAAKFKAAGLRVETDLRNEKVGYKVREHSVG 589

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           K+P+I + G  EA +  + IRR GS     VS+ +AI ILT+E+ PPD +
Sbjct: 590 KVPVIAVVGRNEAEQGQVAIRRLGSQAQTVVSVEEAIRILTEEATPPDLR 639


>gi|167037181|ref|YP_001664759.1| threonyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|320115599|ref|YP_004185758.1| threonyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
 gi|166856015|gb|ABY94423.1| threonyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|319928690|gb|ADV79375.1| threonyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
          Length = 634

 Score =  699 bits (1803), Expect = 0.0,   Method: Composition-based stats.
 Identities = 289/640 (45%), Positives = 411/640 (64%), Gaps = 16/640 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +   DG+ + F    T  ++A+SIS  LAK+AV    NGKV +L+  +  +G +EI+T +
Sbjct: 3   IILKDGTQREFEKGMTVYEIAKSISERLAKEAVGGKFNGKVVELNTKIEEDGKLEILTFD 62

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D     +  H+ +HI+A+AV+ ++ +V++AIGP I++GFYYDFD ++PF++++   IE++
Sbjct: 63  DEEGKKIYWHTSSHILAQAVKRLFKDVKLAIGPAIDNGFYYDFDTDRPFTTEDFEAIEQE 122

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M +II  D    +  L  +KA +L E K E YKVE+++ IP  E ++ Y+QGE+ DLC G
Sbjct: 123 MNKIIKEDYKLERFVLPKDKAIKLMEGKGEPYKVELIKEIPEGEEISFYKQGEFTDLCAG 182

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PH+ STG VK   KL+ VAGAYW+GD    ML RIYG ++  +  L +YL+ LEE++KRD
Sbjct: 183 PHLMSTGMVKTI-KLLSVAGAYWKGDEKNKMLQRIYGISFPKKSMLDEYLHMLEEAKKRD 241

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHL 304
           HRKL +E+DLF I  +G G  F+H KG  I   L  + R   +K  Y+EI TP +L++ L
Sbjct: 242 HRKLGKELDLFSIHPEGPGFPFFHPKGMIIRNILEDFWRKEHMKHGYQEIKTPIILNEEL 301

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHWD Y+ NM+       T  D  T+A+KPMNCPG + V+   + SYR+LP+RL E
Sbjct: 302 WRRSGHWDHYKENMYF------TEIDGETYAIKPMNCPGAMLVYKSTMHSYRDLPLRLCE 355

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
            G V+R+E SG LHGLMRVR FTQDDAH+F T EQ+ +E L + NL+   YK FGFE   
Sbjct: 356 LGLVHRHELSGVLHGLMRVRSFTQDDAHLFMTPEQVEDEILGVINLVDYFYKIFGFEYF- 414

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           V+LSTRPE  +GSD  W+ A N +   L+ +       +   V  G+GAFYGPK ++ LK
Sbjct: 415 VELSTRPENSMGSDEDWELATNALISALNRVN------LPYKVNEGDGAFYGPKIDFHLK 468

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D+IGR WQCGTIQ+DF +P RF   Y+    EK  P+M+HR ++GSIERFIGI+ E+F G
Sbjct: 469 DSIGRTWQCGTIQLDFQMPERFELEYIGPDGEKHRPIMLHRVIYGSIERFIGILTEHFAG 528

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P WL+P+Q  V  I+     YAQ +   L  + +  E D RNE + YKIRE  ++KIP
Sbjct: 529 AFPTWLAPVQVRVLPISDKHYAYAQNVYGRLLENDIRAELDDRNEKVGYKIREAQLQKIP 588

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            ++I GDKE  + ++ +R         +SL + I  + KE
Sbjct: 589 YMLIVGDKEVEQGTVSLRSRKEGDLGAISLSEFIEKILKE 628


>gi|90417791|ref|ZP_01225703.1| threonyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1]
 gi|90337463|gb|EAS51114.1| threonyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1]
          Length = 659

 Score =  698 bits (1802), Expect = 0.0,   Method: Composition-based stats.
 Identities = 387/654 (59%), Positives = 509/654 (77%), Gaps = 7/654 (1%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M + + LTFPDGS++ +    +G D+A  IS+SL KK+VA A++G+V DL+DPV R G+I
Sbjct: 2   MANAVSLTFPDGSVREYEADTSGRDIAGGISKSLLKKSVAYALDGEVRDLADPVGRAGAI 61

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT +DPR+L +IRH  AH+MAEAVQ +WP  QV IGP+IE+GF+YDF ++ PF+ D+L
Sbjct: 62  EIITRDDPRALELIRHDAAHVMAEAVQELWPGTQVTIGPVIENGFFYDFARDTPFTPDDL 121

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM EII R++PF K+  S +KA+ +F  K EAYKVE++++IP  +++ +Y QG+W
Sbjct: 122 PVIEKKMVEIIRRNAPFTKEVWSRDKAKAVFAEKGEAYKVELVDAIPEGQDLKIYSQGDW 181

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPH+ +TGQ+   FKLMKVAGAYWRGDSN PML+RIYGTAW T+++L  YL+ LE
Sbjct: 182 FDLCRGPHMAATGQIGDAFKLMKVAGAYWRGDSNNPMLTRIYGTAWATKEQLAAYLHMLE 241

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+EKRDHR+L REMDLFH  ED  G +FWH KGW+++QTL+SY+RR +  + Y+E+N PQ
Sbjct: 242 EAEKRDHRRLGREMDLFHFQEDAPGTVFWHPKGWRLYQTLVSYVRRRQEAEGYQEVNAPQ 301

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L++ LW+ SGHW+ Y  +MF  +      +D R FALKPMNCPGHV +F HGLKSYR+L
Sbjct: 302 LLERSLWETSGHWEKYHEDMFVTE-----TEDERVFALKPMNCPGHVQIFKHGLKSYRDL 356

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+++AEFG+V+R EPSG+LHGLMRVR FTQDDAHVFCT+EQ+  E LKI++LI+SIY+DF
Sbjct: 357 PLKIAEFGAVHRYEPSGALHGLMRVRAFTQDDAHVFCTEEQITAESLKINDLILSIYRDF 416

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE ++VKLSTRPEKRVGSD LWD AE  M+ VL  I+   +  I T V  G+GAFYGPK
Sbjct: 417 GFEDVLVKLSTRPEKRVGSDELWDKAEASMRDVLAIIEEQGKGHITTAVAEGDGAFYGPK 476

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           +EY L+DAIGR WQ GT QVDFNLP RF AFY++  SEK  PVM+HRA+ GS+ERFIGI+
Sbjct: 477 YEYTLRDAIGRQWQVGTNQVDFNLPGRFGAFYIDRDSEKKTPVMLHRAMLGSVERFIGIL 536

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IEN  G+LPLWLSP+Q +V TITS A +YA ++A  L+   L +ETD RNE INYK+REH
Sbjct: 537 IENCAGHLPLWLSPLQVVVATITSEADDYALQVAEELRQAGLQVETDLRNEKINYKVREH 596

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           S+ K+P+I++CG +EA ER++ IRR G+     ++L DA+  L  E++PPD ++
Sbjct: 597 SMAKVPVIMVCGKREAEERTVNIRRLGAREQTPMALDDAVAALADEAVPPDLKR 650


>gi|158422571|ref|YP_001523863.1| threonyl-tRNA synthetase [Azorhizobium caulinodans ORS 571]
 gi|158329460|dbj|BAF86945.1| threonyl-tRNA synthetase [Azorhizobium caulinodans ORS 571]
          Length = 636

 Score =  698 bits (1801), Expect = 0.0,   Method: Composition-based stats.
 Identities = 388/627 (61%), Positives = 496/627 (79%), Gaps = 1/627 (0%)

Query: 27  AESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIRHSCAHIMAEAV 85
           A +IS+SL KKAVAV ++G + DLS+P+ ++  IEI+T +DPR+L +IRH  AH++AEAV
Sbjct: 2   AAAISKSLLKKAVAVTLDGALTDLSEPITKDARIEIVTRDDPRALELIRHDAAHVLAEAV 61

Query: 86  QSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEK 145
           Q ++P  QV IGP+IE+GFYYDF + +PF++D+L +IE KM+EIIARD PF K+  S ++
Sbjct: 62  QELFPGTQVTIGPVIENGFYYDFARNEPFTTDDLPKIEAKMKEIIARDKPFTKEVWSRDE 121

Query: 146 ARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAG 205
           A+ +F  K EA+KVE++++IP  ++V +Y+QGEWFDLCRGPH+ STG++   FKLMKVAG
Sbjct: 122 AKRVFRDKGEAFKVELVDAIPEDQDVKIYKQGEWFDLCRGPHMPSTGKIGTAFKLMKVAG 181

Query: 206 AYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGV 265
           AYWRGDSN PML+RIYGTAW  Q EL  YL+ LEE+EKRDHR+L REMDLFH  E+G GV
Sbjct: 182 AYWRGDSNNPMLTRIYGTAWKDQSELDAYLHRLEEAEKRDHRRLGREMDLFHFQEEGPGV 241

Query: 266 IFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD 325
           +FWH KGW +FQ L+SYMRR++K DY E+N PQVLD+ LW+ SGHW  Y+ NMF V+ A 
Sbjct: 242 VFWHPKGWSLFQGLVSYMRRRLKADYNEVNAPQVLDKSLWETSGHWGWYKENMFKVQSAG 301

Query: 326 DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRG 385
           +   D R FALKPMNCPGHV +F HGLKSYR+LP+RLAEFG+V+R EPSG+LHGLMRVRG
Sbjct: 302 EETGDERVFALKPMNCPGHVQIFKHGLKSYRDLPLRLAEFGAVHRYEPSGALHGLMRVRG 361

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
           FTQDDAHVFCT+EQM  ECLKI++LI+S Y DFGFE+I VKLSTRPEKRVGSDA+WD AE
Sbjct: 362 FTQDDAHVFCTEEQMAAECLKINDLILSTYADFGFEEITVKLSTRPEKRVGSDAVWDHAE 421

Query: 446 NIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSR 505
           ++M  VL  I+  S  RI TG+L GEGAFYGPKFEY L DAIGR+WQCGT QVDFNLP R
Sbjct: 422 DVMSRVLKQIEAESGGRIKTGILPGEGAFYGPKFEYTLSDAIGREWQCGTTQVDFNLPER 481

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAV 565
           F AFYV++  +K  PVMIHRA+ GS+ERF GI+IE+F G+ PLWL+P+Q  V TIT  A 
Sbjct: 482 FGAFYVDADGQKKTPVMIHRAICGSMERFTGILIEHFAGHFPLWLAPVQLAVCTITQEAD 541

Query: 566 EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
           +YA E+A+  ++  L +E D RNE I+YK+REHS+ KIP+    G KEA+ER++ IRR G
Sbjct: 542 DYAAEVASAARALDLKVELDTRNEKISYKVREHSLAKIPVQFALGKKEAAERTVSIRRLG 601

Query: 626 STTTQKVSLLDAIPILTKESLPPDCQK 652
           S   + + L +A+ +L  E++PPD ++
Sbjct: 602 SQEQKVLPLEEALKLLADEAVPPDLKR 628


>gi|326572997|gb|EGE22976.1| threonyl-tRNA synthetase [Moraxella catarrhalis CO72]
          Length = 639

 Score =  698 bits (1801), Expect = 0.0,   Method: Composition-based stats.
 Identities = 307/642 (47%), Positives = 431/642 (67%), Gaps = 15/642 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            + +T PDGSIK F  + T   VA+SI   LAK  VA  +NG++ D SDP+  + ++EII
Sbjct: 1   MVAITLPDGSIKQFDGNTTVMQVAQSIGAGLAKATVAGRVNGRLVDASDPITTDATVEII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TP+D   + +IRHS AH++  AV+ ++P+V++ IGP+I+DGFYYD   E+PF+ D++A+I
Sbjct: 61  TPKDDAGVEIIRHSTAHLLGHAVKQLYPDVKMVIGPVIDDGFYYDIYSERPFTLDDMAKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M ++I +D   +K+    ++  + F  + E YK+ ++E +P + ++ LY   E+ D+
Sbjct: 121 EARMIQLINQDYDVIKKMTPRDEVIKTFLERGETYKLRLVEDMPDETHMGLYHHQEYIDM 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +T  +K F KL K++GAYWRGD+    L RIYGTAW  +++L  YL  LEE+E
Sbjct: 181 CRGPHVPNTRFLKAF-KLTKMSGAYWRGDAKNEQLQRIYGTAWADKKQLKAYLQRLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KRDHRK+ + ++LFH+ E   G++FWH  GW I+Q L  YMR+ +  + Y EI TPQ++D
Sbjct: 240 KRDHRKIGKALNLFHMQEQAPGMVFWHPNGWTIWQVLEQYMRKVQKDNGYLEIKTPQIVD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW++SGHWD+Y   MF       T  + R +A+KPMNCP HV VFN GLKSYR+LP+R
Sbjct: 300 RSLWEKSGHWDNYGEMMFT------TASEKRDYAIKPMNCPCHVQVFNQGLKSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFGS +RNEPSGSLHG+MRVRGFTQDDAH+FCT  Q+  E L    L + +YKDFGF+
Sbjct: 354 LAEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTNAQIRQEALNFIKLTLDVYKDFGFD 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            I +KLSTRPEKRVG+D LWD AE  +   LD         ++  +  GEGAFYGPK E+
Sbjct: 414 HIQMKLSTRPEKRVGADELWDLAEQALADALDNAG------LDWELQAGEGAFYGPKIEF 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L+D IGR WQCGT+Q+DFNLP R +A +V    E+  PVM+HRA+ GS ERFIGI+IE+
Sbjct: 468 SLQDCIGRVWQCGTLQLDFNLPERLDAEFVGESGERERPVMLHRAILGSFERFIGILIEH 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  P WL+P Q +V  IT    +   ++ + L +      +D RNE I +KIRE +++
Sbjct: 528 YAGLFPAWLAPQQVVVMNITDKQADSVGDVVSKLNAKGYRAISDLRNEKIGFKIRERTLE 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +IP ++I GDKE    ++ +R         +SL D I +L K
Sbjct: 588 RIPFMLILGDKEVESGTVNVRTRTGDNLGSMSLDDFIAVLDK 629


>gi|83590594|ref|YP_430603.1| threonyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
 gi|83573508|gb|ABC20060.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Moorella
           thermoacetica ATCC 39073]
          Length = 633

 Score =  698 bits (1801), Expect = 0.0,   Method: Composition-based stats.
 Identities = 278/642 (43%), Positives = 408/642 (63%), Gaps = 16/642 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +++T PDG++K +    T   VA  IS  LA++A+A  +NG+V DL+ P+  E  +E++T
Sbjct: 1   MRITLPDGTVKEYAPGTTALQVARDISPRLAREALAARVNGEVWDLTRPLPEECQLELLT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
             D       RH+ AH++A+AV+ ++P  ++ IGP I DGFYYDFD E  F+ ++L  +E
Sbjct: 61  FADEGGRLAYRHTAAHVLAQAVKHLFPGTELGIGPAITDGFYYDFDSEHKFTPEDLTALE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +MQ II  D P  ++ +S E+A ELF    E YKVE++  +P    ++ YRQG++ DLC
Sbjct: 121 AEMQRIIKADLPLERREVSREEALELFRRLGEPYKVELINDLPEGVPISTYRQGDFIDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+ STG +K   KL  +AGAYWRG    PML RIYGTA+   ++L +YL+ LEE+ K
Sbjct: 181 AGPHLPSTGYLK-AVKLTSLAGAYWRGSERNPMLQRIYGTAFPKAKDLEEYLHRLEEARK 239

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHR+L  ++ +F + E+G G  F+H KG  I   L  + R + +   Y EI TP +L +
Sbjct: 240 RDHRRLGAQLGIFSLHEEGPGFPFFHHKGMIIRNELEQFWREEHRRAGYLEIRTPVILSR 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+QSGHWD YR NM+  K       D   +A+KPMNCPG + V+     SYR+LP+RL
Sbjct: 300 TLWEQSGHWDHYRENMYFTKI------DGADYAIKPMNCPGAILVYKTEQHSYRDLPLRL 353

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AE G V+R+E SG LHGLMRVR FTQDD+H+F    Q+ +E   + +L+   Y  FGF+ 
Sbjct: 354 AELGLVHRHEKSGVLHGLMRVRAFTQDDSHIFMLPSQIASEIQGVIDLVDRFYNLFGFKY 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRP+  +GS+ +W+ A + ++  L+         +   V  G+GAFYGPK ++ 
Sbjct: 414 H-VELSTRPDNAMGSEEIWETATSALRQALEA------KGMPYAVNEGDGAFYGPKIDFH 466

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+D++GR WQCGTIQ+DF +P +F+  Y+    +K  PVMIHR VFGSIERFIGI+IE++
Sbjct: 467 LEDSLGRTWQCGTIQLDFLMPEKFDLTYIGEDGQKHRPVMIHRVVFGSIERFIGILIEHY 526

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G+ P+WL+P+Q  V  IT    +YA ++   L    +  E + RN+ I YKIR   ++ 
Sbjct: 527 GGSFPVWLAPVQVRVLPITDRHNDYAFKVRAELIRAGIRAEVNDRNDKIGYKIRAAQMEH 586

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IP +++ GDKEA+E ++ +R   +  T +V L + I  +T+E
Sbjct: 587 IPYMLVVGDKEAAEGTVAVRERQAGDTGRVPLAEFIARVTRE 628


>gi|224826514|ref|ZP_03699615.1| threonyl-tRNA synthetase [Lutiella nitroferrum 2002]
 gi|224601115|gb|EEG07297.1| threonyl-tRNA synthetase [Lutiella nitroferrum 2002]
          Length = 632

 Score =  698 bits (1801), Expect = 0.0,   Method: Composition-based stats.
 Identities = 322/646 (49%), Positives = 446/646 (69%), Gaps = 19/646 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP    +  PDGS+++F    +  +VA SI   LA+ ++A  ++G++ D S  + R+  +
Sbjct: 1   MPD---IRLPDGSVRSFDKPVSVHEVAASIGTGLARASLAGRVDGRLVDTSHVIDRDADL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L++IRHS AH++A AV+ ++PE QV IGP IE+GFYYDF  ++PF+ ++L
Sbjct: 58  AIITDKDADGLSIIRHSTAHLLAYAVKELFPEAQVTIGPEIENGFYYDFSYKRPFTPEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM E+  +D P  +  L  ++A   F+S  E YK EI+ESIP  E ++LYR+G++
Sbjct: 118 VAIEKKMGELAKKDIPVERYELPRDEAIAYFKSIGEHYKAEIIESIPQGEVLSLYREGDF 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV STG++K F KLMKVAGAYWRGDS   ML R+YGTAW  +++L QYLY LE
Sbjct: 178 TDLCRGPHVPSTGKLKVF-KLMKVAGAYWRGDSKNEMLQRVYGTAWAKKEDLAQYLYMLE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+EKRDHRKL +++DLFH+ ++  G++FWH KGW+++Q++  YMR  + +  Y+EI TP 
Sbjct: 237 EAEKRDHRKLGKQLDLFHLQDEAPGMVFWHPKGWQLWQSVEQYMRATLAEAGYQEIRTPM 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHW++YR NMF       T  + R +A+KPMNCPGHV VFN GL+SYR+L
Sbjct: 297 VMDRILWEKSGHWENYRENMFT------TESEKRDYAVKPMNCPGHVQVFNQGLRSYRDL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R AEFG+ +RNEPSG+LHG+MRVRGF QDDAH+FCT+EQ+ +E    + L + +Y+ F
Sbjct: 351 PLRYAEFGACHRNEPSGALHGIMRVRGFVQDDAHIFCTEEQIIDEAKAFNELTMRVYRQF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+ + VKLS RPEK  G+   WD AEN ++  L          I    L GEGAFYGPK
Sbjct: 411 GFDNVSVKLSLRPEKYSGTLEAWDRAENGLREALRACG------IEWEELPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            EY +KDA+GR WQCGT+Q+D+ LP R  A YV   + +  PVM+HRA+ GS+ERF+GI+
Sbjct: 465 IEYHIKDALGRSWQCGTLQLDYVLPERLGAEYVAEDNSRKRPVMLHRAILGSLERFLGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IEN  G  PLWL+P+Q +V  IT +  +YA  +   LK     +E D RNE I+YKIREH
Sbjct: 525 IENHAGAFPLWLAPVQMVVMNITEAQADYAASVVQTLKKQGFRVELDLRNEKISYKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           S++K+P  II GDKE ++  I +R  G     +++L D +  L  E
Sbjct: 585 SLQKLPYQIIVGDKEKADGLIAVRARGE-DLGQLTLDDFVARLKAE 629


>gi|88706032|ref|ZP_01103740.1| threonyl-tRNA synthetase [Congregibacter litoralis KT71]
 gi|88699746|gb|EAQ96857.1| threonyl-tRNA synthetase [Congregibacter litoralis KT71]
          Length = 645

 Score =  698 bits (1801), Expect = 0.0,   Method: Composition-based stats.
 Identities = 316/646 (48%), Positives = 438/646 (67%), Gaps = 18/646 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS + F    T  DVA  I   LAK A+A  +NG+  D S  +  + ++
Sbjct: 1   MP---TITLPDGSQREFDHAVTVHDVAADIGPGLAKAALAGVVNGREVDTSFSIDADAAL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT  D   + +IRHS AH++A AVQ ++P  QV IGP+IEDGFYYDF  E  F+ ++L
Sbjct: 58  AIITERDEAGVEIIRHSTAHLLAMAVQDLFPGTQVTIGPVIEDGFYYDFAGEHQFTPEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IE +M EI++ D P  +  +  + A   FE   E+YKVEI+  +P  E ++LYRQGEW
Sbjct: 118 PKIEARMAEIVSADLPVERIVMDRDAAAAAFEKMGESYKVEIIRDLPEGEEISLYRQGEW 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV STG++  F KL K+AGAYWRGD+N  ML R+YGTAW  +++L QYL+ +E
Sbjct: 178 MDLCRGPHVPSTGKLGAF-KLTKLAGAYWRGDANNEMLQRVYGTAWANKKQLKQYLHRIE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+EKRDHRK+ +++DLFH  E+  G++FWH +GW I+Q +  YMR + + + Y+EI TPQ
Sbjct: 237 EAEKRDHRKIGKKLDLFHTQEEAPGMVFWHPQGWTIYQVIEQYMREQQRANGYQEIKTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D  LW++SGH D +  +MF ++       D R FA+KPMNCP HV VFN GL+SYR+L
Sbjct: 297 LVDMSLWEKSGHADKFGDDMFMLQ------ADEREFAVKPMNCPCHVQVFNQGLRSYRDL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFGS +RNEPSGSLHG+MRVRGFTQDD H+FCT+EQ+ +E     + + ++Y+DF
Sbjct: 351 PLRLAEFGSCHRNEPSGSLHGIMRVRGFTQDDGHIFCTEEQIQSEVSTFIDFLHAVYRDF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF++++ +LSTRP KRVGSD  WD AE  +   LD  +      ++   L GEGAFYGPK
Sbjct: 411 GFDEVIYRLSTRPPKRVGSDEDWDRAEKALADALDAQE------LDWQELPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD IGR WQ GT+QVDF++P R +A YV     +  PVM+HRA+ GS ERFIGI+
Sbjct: 465 IEFSLKDCIGRVWQMGTVQVDFSMPGRLDAQYVAEDGSRKTPVMLHRAILGSFERFIGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IENF+G  P+WL+P QA+V  IT    EY Q + + LK+    + +D RNE I +KIREH
Sbjct: 525 IENFEGAFPVWLAPKQAVVLNITEKQDEYVQFVEDSLKNKGFRVFSDLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +I++IP +++ G+KE   +++ +R         +S+     IL ++
Sbjct: 585 TIQRIPYLLVVGEKEVEAKTVAVRSRNGEDLGTMSIEAFAEILDRD 630


>gi|302878338|ref|YP_003846902.1| threonyl-tRNA synthetase [Gallionella capsiferriformans ES-2]
 gi|302581127|gb|ADL55138.1| threonyl-tRNA synthetase [Gallionella capsiferriformans ES-2]
          Length = 637

 Score =  698 bits (1800), Expect = 0.0,   Method: Composition-based stats.
 Identities = 328/640 (51%), Positives = 449/640 (70%), Gaps = 15/640 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS ++F    T +DVA SI   LA+  +A  ++G V D S  +  +  + IIT +
Sbjct: 4   ITLPDGSQRSFDQSVTVADVAASIGAGLARATLAGRVDGSVVDSSFLIETDAQLAIITDK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L VIRHS AH+MA AV+ ++ +VQV IGP+IE+GF+YDF  ++PF+ ++L  IEK+
Sbjct: 64  DEAGLEVIRHSMAHLMAHAVKELFSDVQVTIGPVIENGFFYDFSYQRPFTPEDLLAIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M EI+ RD   ++  +  ++A   F+   E YK EI+ESIPA ++V+LY QGE+ DLCRG
Sbjct: 124 MAEIVKRDLKVVRSVVPRDEAVAYFKGIGENYKAEIIESIPADQDVSLYTQGEFTDLCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV STG++K F KLMK+AGAYWRGDS   ML RIYGTAW  ++EL  YL+ LEE+EKRD
Sbjct: 184 PHVPSTGKLKVF-KLMKLAGAYWRGDSKNEMLQRIYGTAWAKKEELESYLHRLEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHL 304
           HRKL R++DLFH+ E   G++FWH KGW ++Q +  YMR K ++ DY+E+ TP ++D+ L
Sbjct: 243 HRKLGRQLDLFHMQETMPGMVFWHPKGWTLWQEIEQYMRAKFREHDYQEVRTPAIMDKTL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHW++YR NMF       T  + R +A+KPMNCPGHV ++NHGL SYR+LP+RLAE
Sbjct: 303 WEKSGHWENYRDNMFT------TASENRDYAVKPMNCPGHVQIYNHGLHSYRDLPLRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNE SGSLHGLMRVRGFTQDDAH+FCT+ Q+ +E      ++  +Y+DFGF+ ++
Sbjct: 357 FGSCHRNESSGSLHGLMRVRGFTQDDAHIFCTEAQVESEVSNFIVMLNEVYRDFGFDNVI 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           VKLSTRPEKRVGSD  WD AE  +   L       Q+R++  V  GEGAFYGPK E+ LK
Sbjct: 417 VKLSTRPEKRVGSDETWDKAEAGLAAALK------QNRLDYEVQPGEGAFYGPKVEFTLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D++ R WQCGTIQ+DFNLP R +A +V+  + +  PVM+HRA+ GS+ERFIGI+IE+  G
Sbjct: 471 DSLDRMWQCGTIQLDFNLPVRLSAEFVDEDNTRKPPVMLHRAILGSMERFIGILIEHHAG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P+WLSP+Q ++  I+ +  EYA+EI  +L    + ++ D RNE I YKIREHS++K+P
Sbjct: 531 AFPMWLSPVQTVLMNISQAQEEYAKEIGQILARAGIRVQLDLRNEKITYKIREHSLQKLP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
             +I GDKE S R I +R        ++++   I     E
Sbjct: 591 YQLIVGDKEVSGRLIAVRTRSGEDLGQMTIDALIERFKAE 630


>gi|284048337|ref|YP_003398676.1| threonyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
 gi|283952558|gb|ADB47361.1| threonyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
          Length = 636

 Score =  698 bits (1800), Expect = 0.0,   Method: Composition-based stats.
 Identities = 272/644 (42%), Positives = 403/644 (62%), Gaps = 16/644 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
           S+IK++ PDGS+K F   ++   +A+S+++ L K A+   ++G+  DLSD +  +  +E 
Sbjct: 2   SNIKVSLPDGSVKEFEAGSSLLSIAKSLNQKLGKTALLAKVDGENKDLSDVLDHDAKVEF 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +TP+    L  IRH+ +H+MA+A+Q ++P  + AIGP IE GFYYD D +  F+ D+L  
Sbjct: 62  VTPDSEEGLHAIRHTASHVMAQAIQHLFPGTKFAIGPAIEKGFYYDLDSDHVFTPDDLRA 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK+M +II  + P ++  +   +A   F+++ E YKVE++E +P    ++ Y QG++ D
Sbjct: 122 IEKEMSKIIKANYPLVRNEIPRAEALAKFKAEDEPYKVELIEDLPEDAVISTYTQGDFTD 181

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LC GPH  STG+VK F KLM +AGAYWRGD +  ML RIYGTA+ ++++L  YL+ +EE+
Sbjct: 182 LCAGPHCPSTGRVKAF-KLMSIAGAYWRGDEHNKMLQRIYGTAFASKEDLEAYLHMMEEA 240

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           EKRDHRKL +++ LF +++ G G  F+   G  I  TLI Y R    K  Y+E+ TP ++
Sbjct: 241 EKRDHRKLGKQLGLFMLSDYGPGFPFFLPNGMIIRNTLIDYWREVHRKYGYQEVMTPMIM 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ LW+ SGHWD Y+ NM+  +       D   +A+KPMNCPG + V+ +   SY+ELP+
Sbjct: 301 NRQLWETSGHWDHYKENMYFTQI------DGDDYAIKPMNCPGGMLVYANEPHSYKELPL 354

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+ E G V+R+E SG+LHGL RVR FTQDDAH+F    Q+ +   +   L   +Y  FG 
Sbjct: 355 RVGELGLVHRHELSGALHGLFRVRCFTQDDAHIFMMPNQIEDVIQETIRLFDEVYATFGL 414

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
                +LSTRP+  +G DA W+   N ++  +D         +   +  G+GAFYGPK +
Sbjct: 415 TYHA-ELSTRPDNSMGDDATWEMTTNALRKAMDDFG------LKYSINEGDGAFYGPKID 467

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           + LKD+IGR WQCGTIQ+D  LP +FN  Y     +K  PVMIHR V+GSIERFIGI+IE
Sbjct: 468 FHLKDSIGRTWQCGTIQLDMLLPEKFNLTYTGEDGQKHRPVMIHRVVYGSIERFIGILIE 527

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           N+ G  P WL+P Q  V  IT    EYA++I + L++  +    D RNE + YKIRE  +
Sbjct: 528 NYAGAFPAWLAPEQVRVMPITDKYNEYAKQIVDKLEAQKIRAHLDDRNEKVGYKIREAQV 587

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KK+P ++I G+KE    ++ +R   +     + + + I  L  E
Sbjct: 588 KKVPYMLIVGEKEVESGTVSVRSRDNGEQGAMPVDEFIAKLQDE 631


>gi|323137534|ref|ZP_08072611.1| threonyl-tRNA synthetase [Methylocystis sp. ATCC 49242]
 gi|322397160|gb|EFX99684.1| threonyl-tRNA synthetase [Methylocystis sp. ATCC 49242]
          Length = 643

 Score =  698 bits (1800), Expect = 0.0,   Method: Composition-based stats.
 Identities = 368/650 (56%), Positives = 493/650 (75%), Gaps = 10/650 (1%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            + +TFPDG+ + F    TG D+A+SIS SLAK+ VA+ ++G++ DL  PV+ +  IE +
Sbjct: 1   MVAVTFPDGASRQFEAGVTGFDIAKSISPSLAKRTVAMTLDGELVDLMKPVKQDAKIEFV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           + EDPR+L +IRH  AH++AEAVQ ++P  QV IGP+IE+GFYYDF + +PF+ ++L  I
Sbjct: 61  SREDPRALELIRHDAAHVLAEAVQELYPGTQVTIGPVIENGFYYDFHRAEPFTLEDLPAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EKKM+EI+ARD+P +++    + AR  F +K E +K E+++SI + E +++Y+QG W DL
Sbjct: 121 EKKMREIVARDAPIVREEWDRDHARTWFIAKGETFKGELIDSIKSDEPLSVYKQGHWLDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ S G++   FKLMKVAGAYWRGDS +PMLSRIYGTAW TQ+EL  YL+ LEE+E
Sbjct: 181 CRGPHLPSVGKIGTAFKLMKVAGAYWRGDSTKPMLSRIYGTAWATQEELDAYLHRLEEAE 240

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLD 301
           +RDHR+L REMDLFH  E+G G IFWH KGW +FQTL+SYM RR+    Y E+NTPQVLD
Sbjct: 241 RRDHRRLGREMDLFHFQEEGPGAIFWHPKGWTLFQTLVSYMRRRQKAAGYTEVNTPQVLD 300

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW +YR NMF  K      +D R FALKPMNCPGHV +F +GLKSYR+LPV+
Sbjct: 301 RALWETSGHWQTYRENMFVTK-----TEDERIFALKPMNCPGHVQIFKNGLKSYRDLPVK 355

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AEFG V+R EPSG+LHG+MRVR FTQDDAH+FC+++Q+ +E LKI++LI++IY+DFGF+
Sbjct: 356 IAEFGVVHRYEPSGALHGMMRVRAFTQDDAHIFCSEDQIMDEALKINDLILTIYRDFGFD 415

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            ++VKLSTRPEKRVGSD  WD AE  +  VLD +       + T +  GEGAFYGPK EY
Sbjct: 416 DVVVKLSTRPEKRVGSDEAWDKAEAALGKVLDELARR---GLKTSIQEGEGAFYGPKLEY 472

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L+DAIGR+WQCGT QVDFNLP RF AFY+ + S+K  PVMIHRA+FGS+ERF GI+IE+
Sbjct: 473 TLRDAIGREWQCGTTQVDFNLPVRFGAFYIGADSDKKIPVMIHRAMFGSLERFTGILIEH 532

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           F G+LPLWLSP+Q ++ TIT  A +YA E+A   +   L+++ D RNE I YK+REHS+ 
Sbjct: 533 FAGHLPLWLSPLQIVICTITQEADDYAYEVAAAARKLGLNVDIDARNEKITYKVREHSLA 592

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           K+P++++ G KEA+ER+I IRR GS    ++ + +A+  L  E+ PPD +
Sbjct: 593 KVPVLLVAGKKEAAERTISIRRLGSQQQTQMGIDEALAQLAAEATPPDVR 642


>gi|326562407|gb|EGE12726.1| threonyl-tRNA synthetase [Moraxella catarrhalis 7169]
 gi|326569116|gb|EGE19178.1| threonyl-tRNA synthetase [Moraxella catarrhalis BC1]
          Length = 639

 Score =  697 bits (1799), Expect = 0.0,   Method: Composition-based stats.
 Identities = 306/642 (47%), Positives = 430/642 (66%), Gaps = 15/642 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            + +T PDGSIK F  + T   VA+SI   LAK  VA  +NG++ D SDP+  + ++EII
Sbjct: 1   MVAITLPDGSIKQFDGNTTVMQVAQSIGAGLAKATVAGRVNGRLVDASDPITTDATVEII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TP+D   + +IRHS AH++  AV+ ++P+V++ IGP+I+DGFYYD   E+PF+  ++A+I
Sbjct: 61  TPKDDAGVEIIRHSTAHLLGHAVKQLYPDVKMVIGPVIDDGFYYDIYSERPFTLGDMAKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M ++I +D   +K+    ++  + F  + E YK+ ++E +P + ++ LY   E+ D+
Sbjct: 121 EARMIQLINQDYDVIKKMTPRDEVIKTFLERGETYKLRLVEDMPDETHMGLYHHQEYIDM 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +T  +K F KL K++GAYWRGD+    L RIYGTAW  +++L  YL  LEE+E
Sbjct: 181 CRGPHVPNTRFLKAF-KLTKMSGAYWRGDAKNEQLQRIYGTAWADKKQLKAYLQRLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KRDHRK+ + ++LFH+ E   G++FWH  GW I+Q L  YMR+ +  + Y EI TPQ++D
Sbjct: 240 KRDHRKIGKALNLFHMQEQAPGMVFWHPNGWTIWQVLEQYMRKVQKDNGYLEIKTPQIVD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW++SGHWD+Y   MF       T  + R +A+KPMNCP HV VFN GLKSYR+LP+R
Sbjct: 300 RSLWEKSGHWDNYGEMMFT------TASEKRDYAIKPMNCPCHVQVFNQGLKSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFGS +RNEPSGSLHG+MRVRGFTQDDAH+FCT  Q+  E L    L + +YKDFGF+
Sbjct: 354 LAEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTNAQIRQEALNFIKLTLDVYKDFGFD 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            I +KLSTRPEKRVG+D LWD AE  +   LD         ++  +  GEGAFYGPK E+
Sbjct: 414 HIQMKLSTRPEKRVGADELWDLAEQALADALDNAG------LDWELQAGEGAFYGPKIEF 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L+D IGR WQCGT+Q+DFNLP R +A +V    E+  PVM+HRA+ GS ERFIGI+IE+
Sbjct: 468 SLQDCIGRVWQCGTLQLDFNLPERLDAEFVGESGERERPVMLHRAILGSFERFIGILIEH 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  P WL+P Q +V  IT    +   ++ + L +      +D RNE I +KIRE +++
Sbjct: 528 YAGLFPAWLAPQQVVVMNITDKQADSVGDVVSKLNAKGYRAISDLRNEKIGFKIRERTLE 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +IP ++I GDKE    ++ +R         +SL D I +L K
Sbjct: 588 RIPFMLILGDKEVESGTVNVRTRAGENLGSMSLDDFIAVLDK 629


>gi|119945879|ref|YP_943559.1| threonyl-tRNA synthetase [Psychromonas ingrahamii 37]
 gi|166225485|sp|A1SWU5|SYT_PSYIN RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|119864483|gb|ABM03960.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Psychromonas
           ingrahamii 37]
          Length = 635

 Score =  697 bits (1798), Expect = 0.0,   Method: Composition-based stats.
 Identities = 299/642 (46%), Positives = 427/642 (66%), Gaps = 15/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDG+ + F    +  ++A  I   LAK  +A  ++G++ D  DP+  + +I IIT +
Sbjct: 4   ITLPDGNQRQFDNTTSIMEIAADIGPGLAKACIAGRVDGQLVDACDPIEKDANIAIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D + L ++RHSCAH++  A++ ++P  ++AIGP IE+GFYYD D +   + DELA+I K+
Sbjct: 64  DDQGLEILRHSCAHLLGHAIKQLYPNAKMAIGPTIENGFYYDIDLDVTINDDELAKIAKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M E++  +   +K+ +S E+A+ LF+ + E+YK+EILE I   +   LY   E+ D+CRG
Sbjct: 124 MNELVKTNYTVVKEKVSVEEAKALFKERGESYKLEILEGIHPDDRPGLYHHEEYIDMCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV      + F KLMKV+GAYWRG+S+  ML RIYGTAW  +++L  YL  LEE+ KRD
Sbjct: 184 PHVPVMKFCQYF-KLMKVSGAYWRGNSDNKMLQRIYGTAWADKKQLNAYLKRLEEAAKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHL 304
           HRK+ +++DL+H+ E+  G++FWH  GW I++ L  Y+R + +  DY+E+  PQ+LD+ L
Sbjct: 243 HRKIGKQLDLYHMQEEAPGMVFWHSNGWTIYRELEKYVREQTEAYDYQEVKAPQILDRAL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHW  Y+ NMF       T  + R +A+KPMNCPGH+ +FN GLKSYR+LP+R+AE
Sbjct: 303 WEKSGHWGKYKDNMF------CTSSENRDYAIKPMNCPGHLQIFNQGLKSYRDLPLRMAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNEPSGSLHGLMRVR FTQDDAH+FCT+EQ+ +E      ++   YK FGF+ I 
Sbjct: 357 FGSCHRNEPSGSLHGLMRVRAFTQDDAHIFCTEEQILDEVSACIQMVFECYKTFGFDDIA 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           VKLSTRP++RVG DA WD AE  +   L T      + IN GVL GEGAFYGPK E+ L 
Sbjct: 417 VKLSTRPDQRVGDDATWDKAEAALANALTT------NNINYGVLPGEGAFYGPKIEFTLY 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D +GR WQCGTIQ+DF++P R +A +V   +E+  PVMIHRA+ GS+ERFIGI+ E + G
Sbjct: 471 DCLGRGWQCGTIQLDFSMPGRLDASFVGEDNERHTPVMIHRAILGSLERFIGILTEEYAG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P WLSP Q +V  IT     +  E+ N LK   +   +D RNE I +KIREH++K++P
Sbjct: 531 VYPTWLSPKQVVVMNITDKQSAFVDEVVNKLKKSGIRAISDLRNEKIGFKIREHTLKRVP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
            +++ GD+E     + +R        K  + D    + +E +
Sbjct: 591 YLLVIGDQEVEAGEVAVRTRKGDDLGKFKVDDFAAYIKEEII 632


>gi|296113663|ref|YP_003627601.1| threonyl-tRNA synthetase [Moraxella catarrhalis RH4]
 gi|295921357|gb|ADG61708.1| threonyl-tRNA synthetase [Moraxella catarrhalis RH4]
          Length = 639

 Score =  697 bits (1798), Expect = 0.0,   Method: Composition-based stats.
 Identities = 307/642 (47%), Positives = 431/642 (67%), Gaps = 15/642 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            + +T PDGSIK F  + T   VA+SI   LAK  VA  +NG++ D SDP+  + ++EII
Sbjct: 1   MVAITLPDGSIKQFDGNTTVMQVAQSIGAGLAKATVAGRVNGRLVDASDPITTDATVEII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TP+D   + +IRHS AH++  AV+ ++P+V++ IGP+I+DGFYYD   E+PF+ D++A+I
Sbjct: 61  TPKDDAGVEIIRHSTAHLLGHAVKQLYPDVKMVIGPVIDDGFYYDIYSERPFTLDDMAKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M E+I +D   +K+    ++  + F  + E YK+ ++E +P + ++ LY   E+ D+
Sbjct: 121 EARMTELINQDYDVIKKMTPRDEVIKTFLERGETYKLRLVEDMPDETHMGLYHHQEYIDM 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +T  +K F KL K++GAYWRGD+    L RIYGTAW  +++L  YL  LEE+E
Sbjct: 181 CRGPHVPNTRFLKAF-KLTKMSGAYWRGDAKNEQLQRIYGTAWADKKQLKAYLQRLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KRDHRK+ + ++LFH+ E   G++FWH  GW I+Q L  YMR+ +  + Y EI TPQ++D
Sbjct: 240 KRDHRKIGKALNLFHMQEQAPGMVFWHPNGWTIWQVLEQYMRKVQKDNGYLEIKTPQIVD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW++SGHWD+Y   MF       T  + R +A+KPMNCP HV VFN GLKSYR+LP+R
Sbjct: 300 RSLWEKSGHWDNYGEMMFT------TASEKRDYAIKPMNCPCHVQVFNQGLKSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFGS +RNEPSGSLHG+MRVRGFTQDDAH+FCT  Q+  E L    L + +YKDFGF+
Sbjct: 354 LAEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTNAQIRQEALNFIKLTLDVYKDFGFD 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            I +KLSTRPEKRVG+D LWD AE  +   LD         ++  +  GEGAFYGPK E+
Sbjct: 414 HIQMKLSTRPEKRVGADELWDLAEQALADALDNAG------LDWELQAGEGAFYGPKIEF 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L+D IGR WQCGT+Q+DFNLP R +A +V    E+  PVM+HRA+ GS ERFIGI+IE+
Sbjct: 468 SLQDCIGRVWQCGTLQLDFNLPERLDAEFVGESGERERPVMLHRAILGSFERFIGILIEH 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  P WL+P Q +V  IT    +   ++ + L +      +D RNE I +KIRE +++
Sbjct: 528 YAGLFPAWLAPQQVVVMNITDKQADSVGDVVSKLNAKGYRAISDLRNEKIGFKIRERTLE 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +IP ++I GDKE    ++ +R         ++L D I +L K
Sbjct: 588 RIPFMLILGDKEVESGTVNVRTRTGENLGSMNLDDFIAVLDK 629


>gi|326570601|gb|EGE20637.1| threonyl-tRNA synthetase [Moraxella catarrhalis BC7]
          Length = 639

 Score =  697 bits (1798), Expect = 0.0,   Method: Composition-based stats.
 Identities = 308/642 (47%), Positives = 431/642 (67%), Gaps = 15/642 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            + +T PDGSIK F  + T   VA+SI   LAK  VA  +NG++ D SDP+  + ++EII
Sbjct: 1   MVAITLPDGSIKQFDGNTTVMQVAQSIGAGLAKATVAGRVNGRLVDASDPITTDATVEII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TP+D   + +IRHS AH++  AV+ ++P+V++ IGP+I+DGFYYD   E+PF+ D++A+I
Sbjct: 61  TPKDDAGVEIIRHSTAHLLGHAVKQLYPDVKMVIGPVIDDGFYYDIYSERPFTLDDMAKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M E+I +D   +K+    ++  + F  + E YK+ ++E +P + ++ LY   E+ D+
Sbjct: 121 EARMTELINQDYDVIKKMTPRDEVIKTFLERGETYKLRLVEDMPDETHMGLYHHQEYIDM 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +T  +K F KL K++GAYWRGD+    L RIYGTAW  +++L  YL  LEE+E
Sbjct: 181 CRGPHVPNTRFLKAF-KLTKMSGAYWRGDAKNEQLQRIYGTAWADKKQLKAYLQRLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KRDHRK+ + ++LFH+ E   G++FWH  GW I+Q L  YMR+ +  + Y EI TPQ++D
Sbjct: 240 KRDHRKIGKALNLFHMQEQAPGMVFWHPNGWTIWQVLEQYMRKVQKDNGYLEIKTPQIVD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW++SGHWD+Y   MF       T  + R +A+KPMNCP HV VFN GLKSYR+LP+R
Sbjct: 300 RSLWEKSGHWDNYGEMMFT------TASEKRDYAIKPMNCPCHVQVFNQGLKSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFGS +RNEPSGSLHG+MRVRGFTQDDAH+FCT  Q+  E L    L + +YKDFGF+
Sbjct: 354 LAEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTNAQIRQEALNFIKLTLDVYKDFGFD 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            I +KLSTRPEKRVG+D LWD AE  +   LD         ++  +  GEGAFYGPK E+
Sbjct: 414 HIQMKLSTRPEKRVGADELWDLAEQALADALDNAG------LDWELQAGEGAFYGPKIEF 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L+D IGR WQCGT+Q+DFNLP R NA +V    E+  PVM+HRA+ GS ERFIGI+IE+
Sbjct: 468 SLQDCIGRVWQCGTLQLDFNLPERLNAEFVGESGERERPVMLHRAILGSFERFIGILIEH 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  P WL+P Q +V  IT    +   ++ + L +      +D RNE I +KIRE +++
Sbjct: 528 YAGLFPAWLAPQQVVVMNITDKQADSVGDVVSKLNAKGYRAISDLRNEKIGFKIRERTLE 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +IP ++I GDKE    ++ +R         ++L D I +L K
Sbjct: 588 RIPFMLILGDKEVESGTVNVRTRTGENLGSMNLDDFIAVLDK 629


>gi|296135845|ref|YP_003643087.1| threonyl-tRNA synthetase [Thiomonas intermedia K12]
 gi|295795967|gb|ADG30757.1| threonyl-tRNA synthetase [Thiomonas intermedia K12]
          Length = 639

 Score =  696 bits (1797), Expect = 0.0,   Method: Composition-based stats.
 Identities = 310/641 (48%), Positives = 442/641 (68%), Gaps = 15/641 (2%)

Query: 6   KLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITP 64
           ++T PDGS + F    T +++A+SI   L K A+A  ++GK+ D S  + ++  + I+T 
Sbjct: 3   QITLPDGSKRAFEAPLTVAELAQSIGAGLFKAALAGKVDGKLVDTSYRLSQDAEVAIVTD 62

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           +D   + VIRHS AH++A AV+ ++P+ QV IGP+IE+GFYYDF  ++PF+ ++L +IE 
Sbjct: 63  KDAEGVEVIRHSTAHLLAYAVKDLYPDAQVTIGPVIENGFYYDFAYKRPFTPEDLEKIEV 122

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
           +M E+  +D P  ++ L  ++A + F+S  E YK EI+ SIPA E+V+LY +G + DLCR
Sbjct: 123 RMAELARKDEPVRRKVLPRDEAVDYFKSLGEHYKAEIIASIPAGEDVSLYSEGAFTDLCR 182

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV STG++K F KLMKVAGAYWRGD     L RIYGTAW  +++   YL+ L E+EKR
Sbjct: 183 GPHVPSTGRLKVF-KLMKVAGAYWRGDHRNAQLQRIYGTAWAKKEDQDAYLHALAEAEKR 241

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRKL +E+DLFH  E+  G+ FWH KGW ++Q +  YMR+  +D  Y+E+  PQ+LD  
Sbjct: 242 DHRKLGKELDLFHFQEEAPGLAFWHPKGWALWQAVEQYMRQVYRDSGYQEVKGPQILDVS 301

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SGHWD+Y  NMF       T  + R FA+KPMNCPGH+ +FN GL+SYR+LP+R  
Sbjct: 302 LWKRSGHWDNYSENMFF------TESEKRQFAVKPMNCPGHIQIFNSGLRSYRDLPIRYG 355

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSG+LHGL+RVRGFTQDD H+FCT++Q+  E    H   + +Y DFGF  I
Sbjct: 356 EFGSCHRNEPSGALHGLLRVRGFTQDDGHIFCTEDQIEAEVTAFHQQAMQVYTDFGFTDI 415

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            +K++ RPEKR+G +A+WD AE  ++  L     + Q+      L GEGAFYGPK EY +
Sbjct: 416 ALKIALRPEKRIGEEAVWDKAEAALRAALQACGVAWQE------LPGEGAFYGPKIEYHM 469

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           KD+IGR WQ GT+QVDF +P R +A YV+ HS++  PVM+HRA+ GS+ERFIG++IE++ 
Sbjct: 470 KDSIGRAWQVGTMQVDFMMPERLDAEYVDEHSQRVRPVMLHRAIVGSMERFIGVLIEHYA 529

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G +PLWL+P+Q +V  IT +  +YA+ +A  L      +E D RNE INYKIRE+++ K+
Sbjct: 530 GAMPLWLAPVQTVVMNITDAQADYARSVAQALTKQGFRVELDLRNEKINYKIRENALSKV 589

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P +++ GD+E    +I +R  G+     +SL      L++E
Sbjct: 590 PYLLVVGDQERDAGTIAVRARGNVNLGVLSLEALTQKLSQE 630


>gi|119476522|ref|ZP_01616873.1| threonyl-tRNA synthetase [marine gamma proteobacterium HTCC2143]
 gi|119450386|gb|EAW31621.1| threonyl-tRNA synthetase [marine gamma proteobacterium HTCC2143]
          Length = 645

 Score =  696 bits (1797), Expect = 0.0,   Method: Composition-based stats.
 Identities = 316/646 (48%), Positives = 436/646 (67%), Gaps = 18/646 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
           MP    +T PDGS ++F    + +DVA  I   LAK A+A  + G++ D S  + E S +
Sbjct: 1   MPV---ITLPDGSQRSFDQPVSIADVAMDIGPGLAKAALAGKVAGELVDTSYIISENSEL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            I+T  D   L +IRHS AH+MA AVQ ++P VQV IGP+IEDG++YDF     FS+++L
Sbjct: 58  AIVTERDEEGLDLIRHSTAHLMAMAVQELFPGVQVTIGPVIEDGYFYDFATGHSFSTEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IEK+M EI   D P  +  ++  +A + F    E YKV+I+E +PA + +++YRQG W
Sbjct: 118 QKIEKRMLEITKDDLPIERMVMTRTQAIKEFREMGENYKVQIIEDLPAGDEISVYRQGPW 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV STG++K F KLMKVAGAYWRGDSN  ML R+YGTAW+ +++L  YL+ LE
Sbjct: 178 RDLCRGPHVPSTGKLKAF-KLMKVAGAYWRGDSNNEMLQRVYGTAWSNKKDLKAYLHRLE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+EKRDHRKL ++ DLFH+ E+  G++FWH KGW I+ T+ SYMR +   ++Y+EI TPQ
Sbjct: 237 EAEKRDHRKLGKKYDLFHMQEEAPGMVFWHPKGWSIYTTIESYMREQQTLNNYQEIKTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D  LWQ+SGH D +  +MF ++       D R FA+KPMNCP HV +FN GLKSYR+L
Sbjct: 297 LVDFSLWQKSGHADKFGDDMFTLE------ADGRDFAIKPMNCPCHVQIFNQGLKSYRDL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFGS +RNEPSGSLHG+MRVRGF QDDAH+F T+ Q+  E     + + S+Y+DF
Sbjct: 351 PLRLAEFGSCHRNEPSGSLHGIMRVRGFVQDDAHIFATENQIQPEVSVFIDFLHSVYEDF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF  ++ +LSTRPE+RVG+D  WD AE  +   L++        +    L GEGAFYGPK
Sbjct: 411 GFSDVIYRLSTRPEQRVGTDESWDKAEKALADALNS------KGLPWEELPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD IGR WQ GTIQVDF++P R +A YV     +  PVM+HRA+ GS ERFIGI+
Sbjct: 465 IEFSLKDCIGRVWQLGTIQVDFSMPGRLDAQYVAEDGSRQTPVMLHRAILGSFERFIGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+++G  P WL+P Q ++  IT     Y +++   LK+  + ++ D RNE I +KIREH
Sbjct: 525 IEHYEGAFPTWLAPTQVVIANITDKQAPYVKKVHQSLKNSGIRVDADLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            I+K+P +++ GDKE   +++ +R         +SL     IL ++
Sbjct: 585 IIQKVPYLLVVGDKEIENQTVAVRARNGEDLGSMSLEAFEQILNED 630


>gi|152980466|ref|YP_001353177.1| threonyl-tRNA synthetase [Janthinobacterium sp. Marseille]
 gi|166223349|sp|A6SY30|SYT_JANMA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|151280543|gb|ABR88953.1| threonyl-tRNA synthetase [Janthinobacterium sp. Marseille]
          Length = 635

 Score =  696 bits (1796), Expect = 0.0,   Method: Composition-based stats.
 Identities = 313/643 (48%), Positives = 435/643 (67%), Gaps = 15/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            I +  PDGS + F    T + VA +I   LAK A+A  +NG V D S  +  +  + II
Sbjct: 1   MITVRLPDGSQREFDTPVTVAQVAANIGTGLAKAALAGKVNGDVVDTSYLIEKDSDLAII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   + VIRHS AH++A AV+ ++P+ QV IGP+I++GFYYDF  ++PF+ ++L  I
Sbjct: 61  TDKDAEGIDVIRHSTAHLLAYAVKELFPDAQVTIGPVIDNGFYYDFSYKRPFTPEDLVAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EKKM E+  +D P  ++ +  ++A   F+S  EAYK EI+ESIPA + V+LY +G++ DL
Sbjct: 121 EKKMTELAKKDEPVTRKVMPRDEAVAYFKSIGEAYKAEIIESIPADQEVSLYTEGKFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG++K F KLMK+AGAYWRGDS   ML RIYGTAW  ++E   YL+ LEE+E
Sbjct: 181 CRGPHVPSTGKLKVF-KLMKLAGAYWRGDSKNEMLQRIYGTAWAKKEEQEAYLHMLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD 301
           KRDHRKL +++D FH  E+  G+IFWH KGW I+Q +  YMR+  + +DY+E+  PQ+LD
Sbjct: 240 KRDHRKLGKQLDFFHFQEEAPGLIFWHPKGWSIWQQVEQYMRKVYQDNDYQEVKAPQILD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+++GHWD+YR NMF       T  + R++ALKPMNCPGHV ++N  ++SYR+LP+R
Sbjct: 300 RGLWEKTGHWDNYRENMFV------TESENRSYALKPMNCPGHVQIYNSDMRSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
             EFG  +RNEPSG+LHG+MRVRGFTQDD H+FCT+EQ+  E    H   +++Y  FGFE
Sbjct: 354 YGEFGQCHRNEPSGALHGMMRVRGFTQDDGHIFCTEEQIAEEVTAFHAQAMAVYAAFGFE 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            I VKL+ RP+ R+G++  WD AE  ++  L     S  +      L GEGAFYGPK EY
Sbjct: 414 NIDVKLALRPDSRIGTEESWDIAEESLRSALRACGVSWTE------LPGEGAFYGPKIEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            LKD++GR WQ GT+Q+D ++P R  A YV   + +  P+M+HRA+ GS+ERFIGI+IE+
Sbjct: 468 HLKDSLGRAWQVGTVQIDPSMPGRLGAEYVAVDNTRKTPIMLHRAIVGSLERFIGILIEH 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G LPLWL+P+Q  V  I+ +  EYAQ +A  LK     +  D RNE I YKIREHS++
Sbjct: 528 YAGALPLWLAPVQIAVLNISDAQAEYAQAVAQNLKKQGFRVHLDLRNEKITYKIREHSVQ 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K+P II+ GDKE    ++ +R  G+     + +   +  L  E
Sbjct: 588 KLPYIIVIGDKERDAGTVAVRARGNVDLGVMPVDLLVDRLNSE 630


>gi|326563502|gb|EGE13765.1| threonyl-tRNA synthetase [Moraxella catarrhalis 103P14B1]
 gi|326573810|gb|EGE23767.1| threonyl-tRNA synthetase [Moraxella catarrhalis 101P30B1]
          Length = 639

 Score =  696 bits (1796), Expect = 0.0,   Method: Composition-based stats.
 Identities = 306/642 (47%), Positives = 431/642 (67%), Gaps = 15/642 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            + +T PDGSIK F  + T   VA+SI   LAK  VA  +NG++ D SDP+  + ++EII
Sbjct: 1   MVAITLPDGSIKQFDGNTTVMQVAQSIGAGLAKATVAGRVNGRLVDASDPITTDATVEII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TP+D   + +IRHS AH++  AV+ ++P+V++ IGP+I+DGFYYD   E+PF+ D++A+I
Sbjct: 61  TPKDDAGVEIIRHSTAHLLGHAVKQLYPDVKMVIGPVIDDGFYYDIYSERPFTLDDMAKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M ++I +D   +K+    ++  + F  + E YK+ ++E +P + ++ LY   E+ D+
Sbjct: 121 EARMIQLINQDYDVIKKMTPRDEVIKTFLERGETYKLRLVEDMPDETHMGLYHHQEYIDM 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +T  +K F KL K++GAYWRGD+    L RIYGTAW  +++L  YL  LEE+E
Sbjct: 181 CRGPHVPNTRFLKAF-KLTKMSGAYWRGDAKNEQLQRIYGTAWADKKQLKAYLQRLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KRDHRK+ + ++LFH+ E   G++FWH  GW I+Q L  YMR+ +  + Y EI TPQ++D
Sbjct: 240 KRDHRKIGKALNLFHMQEQAPGMVFWHPNGWTIWQVLEQYMRKVQKDNGYLEIKTPQIVD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW++SGHWD+Y   MF       T  + R +A+KPMNCP HV VFN GLKSYR+LP+R
Sbjct: 300 RSLWEKSGHWDNYGEMMFT------TASEKRDYAIKPMNCPCHVQVFNQGLKSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFGS +RNEPSGSLHG+MRVRGFTQDDAH+FCT  Q+  E L    L + +YKDFGF+
Sbjct: 354 LAEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTNAQIRQEALNFIKLTLDVYKDFGFD 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            I +KLSTRPEKRVG+D LWD AE  +   LD         ++  +  GEGAFYGPK E+
Sbjct: 414 HIQMKLSTRPEKRVGADELWDLAEQALADALDNAG------LDWELQAGEGAFYGPKIEF 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L+D IGR WQCGT+Q+DFNLP R +A +V    E+  PVM+HRA+ GS ERFIGI+IE+
Sbjct: 468 SLQDCIGRVWQCGTLQLDFNLPERLDAEFVGESGERERPVMLHRAILGSFERFIGILIEH 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  P WL+P Q +V  IT    +   ++ + L +      +D RNE I +KIRE +++
Sbjct: 528 YAGLFPAWLAPQQVVVMNITDKQADSVGDVVSKLNAKGYRAISDLRNEKIGFKIRERTLE 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +IP ++I GDKE    ++ +R         ++L D I +L K
Sbjct: 588 RIPFMLILGDKEVESGTVNVRTRTGENLGSMNLDDFIAVLDK 629


>gi|90417311|ref|ZP_01225237.1| threonyl-tRNA synthetase [marine gamma proteobacterium HTCC2207]
 gi|90330896|gb|EAS46159.1| threonyl-tRNA synthetase [marine gamma proteobacterium HTCC2207]
          Length = 642

 Score =  696 bits (1795), Expect = 0.0,   Method: Composition-based stats.
 Identities = 315/647 (48%), Positives = 430/647 (66%), Gaps = 18/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP+   +T PDGS + F    + +DVA  I   LAK  +A  +NG+V D S  +  + ++
Sbjct: 1   MPA---ITLPDGSQRVFDNPVSVADVAADIGAGLAKATLAGVVNGQVVDASYIMQEDSTL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            I+T     +L +IRHS AH++A AV+ ++P  QV IGP+IEDGFYYDF  E+ F+ ++L
Sbjct: 58  AIVTDRSDEALDIIRHSSAHLLAMAVKQLFPAAQVTIGPVIEDGFYYDFAFERAFTPEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IE +M E++  D    ++    ++A E F+S  E YK EI+ SIPA E + LYRQG++
Sbjct: 118 EAIEARMTELVKADHGIAREEWDRDEAVEFFKSIGEEYKAEIIASIPAGEPIGLYRQGDF 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV ST ++  F KL KVAGAYWRGDSN  ML RIYGTAW  ++EL  Y+  L 
Sbjct: 178 IDLCRGPHVPSTAKLPAF-KLTKVAGAYWRGDSNNEMLQRIYGTAWTNKKELKAYINRLA 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+EKRDHRK+ +++DL+H+ E+  G IFWH KGW ++  +  YMR K ++  Y+EI TPQ
Sbjct: 237 EAEKRDHRKINKKLDLYHMQEEAPGSIFWHPKGWSVYSAIEEYMRNKQREQGYQEIKTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D  LW++SGH D +  +MF+++       D R +A+KPMNCP HV VFN GLKSYR+L
Sbjct: 297 IVDMSLWEKSGHADKFGDDMFSLQT------DDRNYAVKPMNCPCHVQVFNQGLKSYRDL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFGS +RNEPSGSLHG+MRVR FTQDDAH+FCT+EQ+  E  +  + +  +Y DF
Sbjct: 351 PLRLAEFGSCHRNEPSGSLHGIMRVRSFTQDDAHIFCTEEQIQPEVSQFIDFLHEVYADF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF++I+ +LSTRP +RVGSD  WD AE  +   LD      Q+      L GEGAFYGPK
Sbjct: 411 GFDEIIYRLSTRPPERVGSDEDWDRAEEALGQALDAKSLPWQE------LPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD IGR WQ GTIQVDF++P R +A YV     +  PVM+HRA+ GS ERFIGI+
Sbjct: 465 IEFSLKDCIGRVWQLGTIQVDFSMPGRLDAQYVAEDGARKVPVMLHRAILGSFERFIGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE ++G  P WL+P QA+V  IT +  EYAQE+A  L++    +  D RNE I +KIR H
Sbjct: 525 IEQYEGAFPFWLAPEQAVVANITDAQAEYAQEVAKSLQNKGFRVNCDLRNEKIGFKIRGH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           S++++P I++ GD E   R++ +R         + L     + T E+
Sbjct: 585 SMQRVPFILVVGDNEKESRTVAVRTRDGKDLGSLPLEQVEAMCTTET 631


>gi|303242609|ref|ZP_07329085.1| threonyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
 gi|302589866|gb|EFL59638.1| threonyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
          Length = 635

 Score =  696 bits (1795), Expect = 0.0,   Method: Composition-based stats.
 Identities = 296/643 (46%), Positives = 422/643 (65%), Gaps = 16/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+T  DGS+K +    T  +VAESIS  LA+ A+A  ++GKV DLS  +  +  + ++
Sbjct: 1   MIKITLKDGSVKEYNKGITIKEVAESISAGLARVALAGEVDGKVKDLSYELNEDCKLSLM 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D       RH+ +HIMA+AV++++P V++AIGP I++G+YYDFD E+PFS +ELAQI
Sbjct: 61  TFDDEGGRHAYRHTTSHIMAQAVKNLYPNVKLAIGPAIDNGYYYDFDVEKPFSVEELAQI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E++M++I+  D    +  L  ++A +  E K E YKVE++  +P  E ++ Y+QG++ DL
Sbjct: 121 EEEMKKIVKEDLKLERFTLPRDEAIKFMEEKGEPYKVELIRDLPEGEIISFYKQGDFVDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPH+ STG++K F KL+ VAGAYWRG+    ML RIYGTA++ + +L  YL+ LEE++
Sbjct: 181 CAGPHLESTGKIKAF-KLLSVAGAYWRGNEKNKMLQRIYGTAFSKKSDLDDYLFRLEEAK 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD 301
           KRDHRKL +E+DLF I E+G G  F+  KG  +   L +Y R + K   Y+EI TP +L+
Sbjct: 240 KRDHRKLGKELDLFDIYEEGPGFPFFMPKGMMLRNLLENYWREEHKARGYQEIRTPIILN 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW +SGHWD Y+ NM+  K       D   +A+KPMNCPG + V+   L SYR+LP R
Sbjct: 300 EDLWHRSGHWDHYKENMYFTKI------DEGDYAIKPMNCPGGMLVYKRKLHSYRDLPQR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AE G V+R+E SG+LHGLMRVR FTQDDAH+F T EQ+ +E L + NLI   Y  FGF+
Sbjct: 354 MAELGLVHRHELSGALHGLMRVRCFTQDDAHIFMTPEQIKDEVLGVINLIDDFYNVFGFK 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPE  +GSD  W+ A N ++  LD        ++N  V  G+GAFYGPK ++
Sbjct: 414 YH-VELSTRPEDSMGSDEQWEMATNALRDALDA------RKMNYKVNEGDGAFYGPKIDF 466

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L+D+IGR WQCGTIQ+DF +P RF+  YV +  EK  PVMIHR VFGSIERFI I+ E+
Sbjct: 467 HLEDSIGRTWQCGTIQLDFQMPQRFDLNYVGADGEKHRPVMIHRVVFGSIERFIAILTEH 526

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           F G  P WLSP+Q  +  +     ++A E+   L++  + +E D RNE I YKIRE  ++
Sbjct: 527 FAGAFPTWLSPVQVKILPLIDKHHQFAGEVKAALEAKGVRVEVDLRNEKIGYKIREAQLE 586

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K P +++ GDKE    ++ +R         ++L D +  + +E
Sbjct: 587 KTPYMLVIGDKELENGAVAVRSRKDGDLGSMALNDFVNKIVEE 629


>gi|237653686|ref|YP_002890000.1| threonyl-tRNA synthetase [Thauera sp. MZ1T]
 gi|237624933|gb|ACR01623.1| threonyl-tRNA synthetase [Thauera sp. MZ1T]
          Length = 638

 Score =  695 bits (1794), Expect = 0.0,   Method: Composition-based stats.
 Identities = 320/646 (49%), Positives = 438/646 (67%), Gaps = 18/646 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS+++F    T ++VA SI   LAK A+A   +GK+ DLS     +  +
Sbjct: 1   MP---NITLPDGSVRSFDHPVTVAEVAASIGAGLAKAAIAGRTDGKLVDLSHRFEADADL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            I+T ++   L +IRHS AH++A AV+ ++P+ QV IGP+I++GFYYDF  ++PF+ ++L
Sbjct: 58  AIVTDKNAEGLEIIRHSTAHLLAHAVKELFPDAQVTIGPVIDNGFYYDFSYKRPFTPEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IE++M EI  R+ P  ++    +KA + F+   E YK EI+ SIPA E+V+LYRQG++
Sbjct: 118 QAIEQRMAEIAKREIPVHREVWPRDKAVDFFKGIGEHYKAEIIASIPAGEDVSLYRQGDF 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV STG++K F KLMK+AGAYWRGDS   ML R+YGTAW  + EL  YL+ +E
Sbjct: 178 IDLCRGPHVPSTGKLKVF-KLMKLAGAYWRGDSKNEMLQRVYGTAWTKKDELDAYLHMIE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+EKRDHRKL R++DLFHI ++  G++FWH KGW ++Q +  Y+RR I +  Y+E+ TPQ
Sbjct: 237 EAEKRDHRKLGRQLDLFHIQDEAPGMVFWHAKGWTLWQQVEQYLRRTIGEHGYQEVKTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D+ LW++SGHW  Y   MF       T  + R +A+KPMNCP H+ +FN GLKSYR+L
Sbjct: 297 IVDRSLWEKSGHWGMYSDLMFT------TQSEKRDYAVKPMNCPCHIQIFNQGLKSYRDL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFGS +RNEPSGSLHG+MRVR F QDDAH+FC + Q+  E  +   L+  +Y+DF
Sbjct: 351 PLRMAEFGSCHRNEPSGSLHGIMRVRNFVQDDAHIFCAESQVQAESAEFIRLLQQVYQDF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF  + VKLSTRPEKRVG+D  WD AE                 +   +  GEGAFYGPK
Sbjct: 411 GFTDVQVKLSTRPEKRVGTDEQWDAAEAA------LAAALDAQGLQYELQPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD +GR WQCGT+Q+DFNLP R  A YV+  + K  PVM+HRA+ GS+ERFIGI+
Sbjct: 465 IEFSLKDCLGRVWQCGTLQLDFNLPVRLGAEYVDEDNTKKVPVMLHRAILGSLERFIGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+  G +PLWL+P+QA+V  I+    EYA+E    LK     +E D RNE INYKIREH
Sbjct: 525 IEHHAGAMPLWLAPVQAVVMNISEGQAEYAEEAVARLKKAGFRVEADLRNEKINYKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           S++K+P  I+ G+KE +   + +R  G     ++SL   I    +E
Sbjct: 585 SVQKLPYQIVIGEKEKAAGLVAVRARGGQDLGQMSLDSLIERWRRE 630


>gi|326562776|gb|EGE13071.1| threonyl-tRNA synthetase [Moraxella catarrhalis 46P47B1]
 gi|326563180|gb|EGE13448.1| threonyl-tRNA synthetase [Moraxella catarrhalis 12P80B1]
          Length = 639

 Score =  695 bits (1794), Expect = 0.0,   Method: Composition-based stats.
 Identities = 306/642 (47%), Positives = 432/642 (67%), Gaps = 15/642 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            + +T PDGSIK F  + T   VA+SI   LAK  VA  +NG++ D SDP+  + ++EII
Sbjct: 1   MVAITLPDGSIKQFDGNTTVMQVAQSIGAGLAKATVAGRVNGRLVDASDPITTDATVEII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TP+D   + +IRHS AH++  AV+ ++P+V++ IGP+I+DGFYYD   E+PF+ D++A+I
Sbjct: 61  TPKDDAGVEIIRHSTAHLLGHAVKQLYPDVKMVIGPVIDDGFYYDIYSERPFTLDDMAKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M ++I +D   +K+    ++  + F  + E YK+ ++E +P + ++ LY   E+ D+
Sbjct: 121 EARMIQLINQDYDVIKKMTPRDEVIKTFLERGETYKLRLVEDMPDETHMGLYHHQEYIDM 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +T  +K F KL K++GAYWRGD+    L RIYGTAW  +++L  YL  LEE+E
Sbjct: 181 CRGPHVPNTRFLKAF-KLTKMSGAYWRGDAKNEQLQRIYGTAWADKKQLKAYLQRLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KRDHRK+ + ++LFH+ E   G++FWH  GW I+Q L  YMR+ +  + Y EI TPQ++D
Sbjct: 240 KRDHRKIGKALNLFHMQEQAPGMVFWHPNGWTIWQVLEQYMRKVQKDNGYLEIKTPQIVD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW++SGHWD+Y   MF       T  + R +A+KPMNCP HV VFN GLKSYR+LP+R
Sbjct: 300 RSLWEKSGHWDNYGEMMFT------TASEKRDYAIKPMNCPCHVQVFNQGLKSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFGS +RNEPSGSLHG+MRVRGFTQDDAH+FCT  Q+ +E L    L + +YKDFGF+
Sbjct: 354 LAEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTNAQIRSEALNFIKLTLDVYKDFGFD 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            I +KLSTRPEKRVG+D LWD AE  +   LD         ++  +  GEGAFYGPK E+
Sbjct: 414 HIQMKLSTRPEKRVGADELWDLAEQALADALDNAG------LDWELQAGEGAFYGPKIEF 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L+D IGR WQCGT+Q+DFNLP R +A +V    E+  PVM+HRA+ GS ERFIGI+IE+
Sbjct: 468 SLQDCIGRVWQCGTLQLDFNLPERLDAEFVGESGERERPVMLHRAILGSFERFIGILIEH 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  P WL+P Q +V  IT    +   ++ + L +      +D RNE I +KIRE +++
Sbjct: 528 YAGLFPAWLAPQQVVVMNITDKQADSVGDVVSKLNAKGYRAISDLRNEKIGFKIRERTLE 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +IP ++I GDKE    ++ +R         ++L D I +L K
Sbjct: 588 RIPFMLILGDKEVESGTVNVRTRTGDNLGSMNLDDFIAVLDK 629


>gi|288940715|ref|YP_003442955.1| threonyl-tRNA synthetase [Allochromatium vinosum DSM 180]
 gi|288896087|gb|ADC61923.1| threonyl-tRNA synthetase [Allochromatium vinosum DSM 180]
          Length = 639

 Score =  695 bits (1794), Expect = 0.0,   Method: Composition-based stats.
 Identities = 315/642 (49%), Positives = 444/642 (69%), Gaps = 16/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS ++F    +  DVA +I   LAK A+A  ++G++ D S  + R+ ++ I+T +
Sbjct: 4   ITLPDGSQRSFEQPVSVHDVAAAIGPGLAKAALAGRVDGRLVDTSHVIDRDAALAIVTSK 63

Query: 66  DPR-SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D   +L ++RH  AH+MA+AVQ ++P  QV IGP IE+GFYYDF +++PF+  +L +IE+
Sbjct: 64  DEETALELLRHDAAHVMAQAVQELYPGAQVTIGPAIENGFYYDFARDEPFTPADLERIEE 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESI-PAKENVTLYRQGEWFDLC 183
           +M EI+ RD P +++ +  E+A+ +F    E YKVEI++ I PA E V++YRQG+WFD+C
Sbjct: 124 RMHEIVKRDLPIVREIMDREEAKRVFAELGEHYKVEIIDDIIPAGEAVSIYRQGDWFDVC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG++   FKLMK+AGAYWRGDS   ML RIYGTAW  ++EL  YL+ LEE+EK
Sbjct: 184 RGPHLPSTGKLGNGFKLMKLAGAYWRGDSRNAMLQRIYGTAWRDKKELNAYLHRLEEAEK 243

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH  ++  G+ FWH KG  +++   +YMR K+ +  Y+E+ TPQVLD+
Sbjct: 244 RDHRKLGKQLDLFHFQDEAPGMAFWHAKGRVVYRLAETYMREKLDEYGYQEVETPQVLDR 303

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD +   MF       T  D R FA+KPMNCPGH+ ++N GLKSYR+LP+RL
Sbjct: 304 SLWERSGHWDKFAGGMFT------THLDDRDFAIKPMNCPGHIQLYNQGLKSYRDLPLRL 357

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFG V+RNEPSG+LHGLMR R FTQDDAHVFCT++Q+ +E   + +++   Y+DFGF+ 
Sbjct: 358 AEFGVVHRNEPSGTLHGLMRARRFTQDDAHVFCTEDQLQSEVATLIDMVFETYRDFGFDA 417

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I + LS RPE+RVG+D LWD AE  +   LD         +   +  GEGAFYGPK E+ 
Sbjct: 418 IDLALSLRPEQRVGADELWDKAEAALAQSLDD------KGLTYRIQPGEGAFYGPKIEFT 471

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D+IGR WQCGTIQVDF++P R  A Y+   + K  PVMIHRAV GS+ERFIGI+IE++
Sbjct: 472 LHDSIGRAWQCGTIQVDFSMPGRLGAHYIAEDNSKQTPVMIHRAVLGSVERFIGILIEHY 531

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G LP+WL+P+QA+   IT    +Y +E+   L+      E D RNE I +KIREH++++
Sbjct: 532 AGLLPVWLAPVQAVALNITDRQADYVKEVVKTLRDKGFRAEFDLRNEKIGFKIREHTLQR 591

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P +++ GD+E   RS+ +R          SL   I  L+++
Sbjct: 592 VPYLLVVGDREVETRSLSVRDRQGQDLGSFSLDAFIERLSQD 633


>gi|83309439|ref|YP_419703.1| threonyl-tRNA synthetase [Magnetospirillum magneticum AMB-1]
 gi|123740560|sp|Q2WAI1|SYT_MAGMM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|82944280|dbj|BAE49144.1| Threonyl-tRNA synthetase [Magnetospirillum magneticum AMB-1]
          Length = 638

 Score =  695 bits (1794), Expect = 0.0,   Method: Composition-based stats.
 Identities = 328/648 (50%), Positives = 449/648 (69%), Gaps = 14/648 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +T PDG ++ F    TG DVA+ I   LAK A+A+ I+G++ DL+  + R+ ++ II
Sbjct: 1   MVAITLPDGKVRQFDHPVTGLDVAKDIGPGLAKAALAITIDGEMKDLATLIDRDVNLSII 60

Query: 63  TPED-PRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           T +    +L ++RH  AH+MAEAV+ ++PE QV IGP IE+GFYYDF +  PF+ D+LA+
Sbjct: 61  TAKSGQDALELLRHDAAHVMAEAVKELYPETQVTIGPSIENGFYYDFARPTPFTPDDLAK 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE +M EI+ RD    ++    + A + FE   E YK EI+ SIPA + + LYRQG + D
Sbjct: 121 IEARMAEIVDRDEAITREEWDRDAAVKFFEDAGEKYKAEIIASIPADQKIGLYRQGNFID 180

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ ST ++ K FKLMK+AGAYWRGDS   ML RIYGTAW  ++EL  YL+ LEE+
Sbjct: 181 LCRGPHLPSTAKLGKAFKLMKLAGAYWRGDSRNEMLQRIYGTAWFDKKELDAYLHMLEEA 240

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVL 300
           EKRDHR+L REM+LFH  E+ +G +FWH+KGW +++ + SYMRR+++ ++YEE+ TPQ++
Sbjct: 241 EKRDHRRLGREMELFHQQEEAAGSVFWHKKGWTLYRAVESYMRRRLEANNYEEVKTPQLV 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D  LW+ SGH D +  +MF +K  D+     R  A+KPMNCP HV +F  G+KSYR+LP+
Sbjct: 301 DFSLWEASGHADKFSESMFTIKTQDE-----RHLAVKPMNCPCHVQIFRQGIKSYRDLPL 355

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AEFGS +R EPSG+LHG+MRVR FTQDDAH+FCT++Q+ +E +    L+  +Y DFGF
Sbjct: 356 RMAEFGSCHRYEPSGALHGIMRVRAFTQDDAHIFCTEDQITSETIAFCQLLKEVYTDFGF 415

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
             + VK S RP KR GSD  WD AE+ +              + T +  GEGAFYGPK E
Sbjct: 416 TDVRVKFSDRPAKRAGSDETWDKAESALLEASKAAG------LETVLNPGEGAFYGPKLE 469

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           ++L+DAIGRDWQCGT+QVDF LP R +A YV     K  PVM+HRA+ GS ERF+GI+IE
Sbjct: 470 FVLRDAIGRDWQCGTLQVDFVLPERLDAAYVAEDGAKKRPVMLHRAILGSFERFLGILIE 529

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           NF G  PLWL+P Q +V TI S A ++A+E+   LK+  L +E D RNE INYK+REHS+
Sbjct: 530 NFAGRFPLWLAPTQVVVATIVSEADDFAREVEATLKAAGLRVELDLRNEKINYKVREHSV 589

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
            K+P++++ G +EA  R + IRR GS   + V+L  A+  L  E+ PP
Sbjct: 590 AKVPVMLVVGKREAESRQVAIRRLGSQNQEIVALDQAVATLAAEATPP 637


>gi|298369384|ref|ZP_06980702.1| threonine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
 gi|298283387|gb|EFI24874.1| threonine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
          Length = 648

 Score =  695 bits (1794), Expect = 0.0,   Method: Composition-based stats.
 Identities = 305/643 (47%), Positives = 440/643 (68%), Gaps = 16/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +T PDGS++ +    T + +A SI   LAK  VA  +NGK+ D SDP+ ++ S++II
Sbjct: 12  MLNITLPDGSVRQYEAPVTVAQIAASIGSGLAKATVAGKVNGKLVDASDPIGKDASVQII 71

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TP+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IEDGFYYD   ++PF+ D++A I
Sbjct: 72  TPKDKEGVEIIRHSCAHLIGHAVKQLYPNAKMVIGPVIEDGFYYDIATDKPFTPDDVAAI 131

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M+E+I +D   +K      +  + F+ + E YK+ +++ +P  E + LY   E+ D+
Sbjct: 132 EARMKELINQDYDVVKIMTPRAETIKTFQERGEEYKLRLIDDMPEVEEMGLYHHQEYVDM 191

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+E
Sbjct: 192 CRGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKAYIQRIEEAE 250

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL +++DLFH+ ++  G++FWH +GW ++QT+  +MR+++    Y E+ TPQ++D
Sbjct: 251 KRDHRKLGKQLDLFHLQDEAPGMVFWHPRGWALWQTIEQHMRKELDAAGYREVKTPQIMD 310

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           +  W++SGHWD+Y+ NMF       T  + R +A+KPMNCPGHV +FN+ L+SYR+LP+R
Sbjct: 311 KAFWEKSGHWDNYKDNMFV------TQSEKREYAVKPMNCPGHVQIFNNSLRSYRDLPMR 364

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+ +E  + + L++ IYK FGF 
Sbjct: 365 LAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVDEARRFNELLVRIYKQFGFH 424

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + VKLS RPEKR GSD +WD AE  ++  L          +    L GEGAFYGPK EY
Sbjct: 425 DVAVKLSLRPEKRAGSDDIWDKAEQGLRDALTACG------VEWEELPGEGAFYGPKIEY 478

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDAIGR WQCGT+Q+DF LP R +A YV   + +  PVM+HRA+ GS+ERFIGI+IEN
Sbjct: 479 HVKDAIGRSWQCGTLQLDFVLPDRLDAEYVTESNGRARPVMLHRAILGSLERFIGILIEN 538

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G+ PLWL+P+Q +V  IT    +Y +++   L++ +  +E D RNE I YKIR++S  
Sbjct: 539 HAGSFPLWLAPVQMVVMNITEHQTDYCRQVVERLQAENFRVELDLRNEKIGYKIRDNSQY 598

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           + P  I+ GDKE  E  + +R   +     +++ D I  L +E
Sbjct: 599 RFPYQIVVGDKEKQENKVAVR-RKAEDLGSLNIDDFISQLKQE 640


>gi|30248961|ref|NP_841031.1| thrS; threonyl-tRNA synthetase (threonine--tRNA ligase) protein
           [Nitrosomonas europaea ATCC 19718]
 gi|73919810|sp|Q82VV1|SYT_NITEU RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|30138578|emb|CAD84869.1| thrS; threonyl-tRNA synthetase (threonine--tRNA ligase) protein
           [Nitrosomonas europaea ATCC 19718]
          Length = 635

 Score =  695 bits (1794), Expect = 0.0,   Method: Composition-based stats.
 Identities = 321/640 (50%), Positives = 440/640 (68%), Gaps = 15/640 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +  PDG+ + F    T  +VAESIS  LA+ A+A  +NGK+ DLS+ +  +  + +IT +
Sbjct: 4   VRLPDGTDRVFDNSVTVREVAESISPGLARAALAGKLNGKLVDLSEQIETDSDLVLITDK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++A AV+ ++P  QV IGP+IE+GFYYDF  E+PF+ ++L  IEK+
Sbjct: 64  DSEGLEIIRHSCAHLLAHAVKELFPGTQVTIGPVIENGFYYDFSYERPFTPEDLVAIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           MQEI  R     ++     +A   F+   E YK +I+ESIP  E V+LY QG++ DLCRG
Sbjct: 124 MQEISKRALKIERKVWDRSRAINFFKDIGEHYKAQIIESIPDNEPVSLYSQGDFTDLCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV  T ++K F KLMK+AGAYWRGDS   ML RIYGTAW + +E   YL  LEE+EKRD
Sbjct: 184 PHVPYTSKIKVF-KLMKIAGAYWRGDSKNEMLQRIYGTAWVSNEEQNNYLRCLEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHL 304
           HRKL +++DLFH  E+  G+++WH KGW ++Q +  YMR+ +  + Y EI TPQVLD+ L
Sbjct: 243 HRKLGKQLDLFHTQEEAPGMVYWHPKGWVVWQQIEQYMRQTLAGNGYVEIRTPQVLDRSL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W+ SGHW+++R NMF       T  + R +A+KPMNCPGHV VFNHGL+SYR+LP+RLAE
Sbjct: 303 WESSGHWENFRENMFI------TESENRHYAIKPMNCPGHVQVFNHGLRSYRDLPLRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNE SG+LHGLMRVR FTQDDAH+FCT++Q+  E  K  +L+  +Y +FGF + +
Sbjct: 357 FGSCHRNEASGALHGLMRVRSFTQDDAHIFCTEDQILGEVTKFIDLLNQVYINFGFSETL 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +KLSTRP KRVG++  WD AE  +   L+      Q  +N  V  GEGAFYGPK E+ LK
Sbjct: 417 IKLSTRPLKRVGTEDQWDKAETALATALN------QKELNWEVQPGEGAFYGPKIEFTLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D++GR WQCGT+Q+DF++P+R  A Y+   + +  PVM+HRA+ GS+ERFIGI+IE+  G
Sbjct: 471 DSLGRKWQCGTLQLDFSMPARLGAGYIAEDNTRKIPVMLHRAILGSMERFIGILIEHHAG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
            LPLWLSP Q I+  I+ +  EYAQ I + LK   +   +D RNE I+YKIREHS++KIP
Sbjct: 531 ALPLWLSPEQVIILNISRNQAEYAQLITDELKQSGIRASSDLRNEKISYKIREHSMQKIP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            +++ GDKE   R++ +R         +S+   +    +E
Sbjct: 591 YLMVVGDKEMENRTVTVRGRAGQDYGAMSVESFVVRAQEE 630


>gi|254294721|ref|YP_003060744.1| threonyl-tRNA synthetase [Hirschia baltica ATCC 49814]
 gi|254043252|gb|ACT60047.1| threonyl-tRNA synthetase [Hirschia baltica ATCC 49814]
          Length = 654

 Score =  695 bits (1794), Expect = 0.0,   Method: Composition-based stats.
 Identities = 311/660 (47%), Positives = 450/660 (68%), Gaps = 18/660 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            IK+T PDGS++     ++  DVAESIS+SL+K+++   +NG++ D+  P+  +  + + 
Sbjct: 1   MIKITLPDGSMREIAAGSSPRDVAESISKSLSKRSIVATVNGELWDMERPLEGDSQVALH 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           + +DP+ L +IRH  AHI+A+AVQ ++P  QV IGP+I+DGFYYDF +++ FS+D+  +I
Sbjct: 61  SKDDPQGLEIIRHDAAHILAQAVQKLFPGTQVTIGPVIDDGFYYDFARKEAFSTDDFEKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M  +I  D P +++  + ++A ++F+   E YK E++  +P  E +T+YRQG+WFDL
Sbjct: 121 EKEMNRVIDADYPIVREVWNRDEAIKMFKDIGEDYKAELISDLPVDETITVYRQGDWFDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C+GPH+ STG++ K FKLMK+AGAYWRGDSN   L R+YGTAW+ +++L  YL  LEE+E
Sbjct: 181 CKGPHLPSTGKLPKAFKLMKLAGAYWRGDSNNAQLQRMYGTAWSNEKDLKAYLVRLEEAE 240

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLD 301
           KRDHRKL  ++DLFH+  +  G +FWH  G+ I++ L +Y+ RR+  D Y E+ TPQ+L+
Sbjct: 241 KRDHRKLGNQLDLFHLQSEAQGSVFWHPNGFMIWRQLEAYIRRRQDDDGYVEVKTPQLLN 300

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIK--------DLRTFALKPMNCPGHVAVFNHGLK 353
              W+QSGHW  +R NMF V     +++        +    ALKPMNCP HV +F  G +
Sbjct: 301 SVFWEQSGHWSKFRENMFVVPDEIPSVEEEGPVLSGEGELMALKPMNCPAHVQIFKQGTR 360

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYR+LP+R+AEFG  +RNEP G+LHG+MRVR  TQDDAH+FC ++Q+ NE L+  NL   
Sbjct: 361 SYRDLPLRMAEFGCCHRNEPHGALHGIMRVRQMTQDDAHIFCREDQVANETLRFLNLFKR 420

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           +Y DFG ++I  KL+TRPE+R G+D  WD AE  +   L+         +      GEGA
Sbjct: 421 VYGDFGLDQISYKLATRPEQRAGNDETWDQAEGALATALNEAG------LEFDYAEGEGA 474

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK E+ L DAIGR WQCGT+Q+D+ LP R +A YV    EK  PVM+HRAVFG+ ER
Sbjct: 475 FYGPKLEFHLTDAIGRTWQCGTLQLDYVLPERLDATYVGEDGEKHRPVMLHRAVFGTFER 534

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           F+GI+IEN+ G  P+WL+P Q  + TIT  A  YA+++A  L++  + +E D R+E INY
Sbjct: 535 FMGILIENYAGAFPMWLAPTQVAIATITPKADAYAEKVAARLRAKGIRVELDLRHEKINY 594

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT--QKVSLLDAIPILTKESLPPDCQ 651
           K+REHS  K+P+I + G  EA E  + +RRFG+     + +SL +A  +L+ E+L PD +
Sbjct: 595 KVREHSHMKVPVIAVIGMNEAEEEKLALRRFGAGNARPEILSLDEACQLLSVEALAPDLR 654


>gi|237747667|ref|ZP_04578147.1| threonyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
 gi|229379029|gb|EEO29120.1| threonyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
          Length = 635

 Score =  695 bits (1794), Expect = 0.0,   Method: Composition-based stats.
 Identities = 316/643 (49%), Positives = 435/643 (67%), Gaps = 15/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +  PDGS + F    T S VA SI   LAK A+A  +NGK+ D S  +  +  + I+
Sbjct: 1   MISVRLPDGSAREFNEPVTVSQVAASIGSGLAKAAIAGKVNGKLVDTSYMIDNDVELSIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T  DP  + ++RHS AH++A AV+ ++P+ QV IGP+I++GFYYDF  ++PF+ ++L  I
Sbjct: 61  TDRDPEGVDILRHSTAHLLAYAVKQLFPDAQVTIGPVIDNGFYYDFSYKRPFTPEDLQAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EKKM E+  ++    ++ L  ++A   F+S  E YK EI+ESIP  E+V+LY  G + DL
Sbjct: 121 EKKMTELARKNEEVTRKVLPRDEAVAYFKSIGEDYKAEIIESIPQNEDVSLYTSGGFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV + G++K F KLM++AGAYWRG+S+  ML RIYGTAW  +++   YL+ LEE+E
Sbjct: 181 CRGPHVPANGKLKVF-KLMRLAGAYWRGNSDNEMLQRIYGTAWAKKEDQDAYLHMLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHR+L R +DLFH  ++  G+IFWH KGW I+Q +  YMRR  ++  Y+E+  PQ+LD
Sbjct: 240 KRDHRRLGRSLDLFHFQDEAPGLIFWHAKGWTIWQQVEQYMRRVYQENGYQEVKGPQILD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW++SGHWD+Y+ NMF       T  + R +ALKPMNCPGHV ++   L SYRELP+R
Sbjct: 300 RSLWEKSGHWDNYKENMFT------TESENRIYALKPMNCPGHVQIYRSNLHSYRELPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
             EFG  +RNEPSGSLHG+MRVRGFTQDD H+FCT++Q+ +EC+   +L+  +Y+DFGF 
Sbjct: 354 YGEFGQCHRNEPSGSLHGMMRVRGFTQDDGHIFCTEDQILDECVAFTDLLKKVYQDFGFT 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            I+ K++TRPEKRVGSD  WD AEN +   L+    S        +  G+GAFYGPK EY
Sbjct: 414 DIIYKIATRPEKRVGSDEAWDKAENALIQSLERSGCS------YELSPGDGAFYGPKIEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            LKDAIGR WQCGTIQVDF++P R  A YV   + +  PVMIHRA+ GS+ERFIGI+IEN
Sbjct: 468 TLKDAIGRMWQCGTIQVDFSMPMRLGAEYVAEDNTRKIPVMIHRAILGSLERFIGILIEN 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G +PLWL+P+ A V  I+ S  EYAQ +   +K      E D RNE I YKIR+HS+ 
Sbjct: 528 HAGAMPLWLAPVHATVLNISDSQAEYAQSVVQTMKKAGFRAEVDLRNEKITYKIRDHSVN 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K+P +I+ GDKE +  ++ +R  G      +++ + +  +  E
Sbjct: 588 KVPYLIVVGDKEKNANTVAVRARGGVDLGVMTVEELMARMENE 630


>gi|326571308|gb|EGE21325.1| threonyl-tRNA synthetase [Moraxella catarrhalis BC8]
          Length = 639

 Score =  695 bits (1794), Expect = 0.0,   Method: Composition-based stats.
 Identities = 308/640 (48%), Positives = 430/640 (67%), Gaps = 15/640 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            + +T PDGSIK F  + T   VA+SI   LAK  VA  +NG++ D SDP+  + ++EII
Sbjct: 1   MVAITLPDGSIKQFDGNTTVMQVAQSIGAGLAKATVAGRVNGRLVDASDPITTDATVEII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TP+D   + +IRHS AH++  AV+ ++P+V++ IGP+I+DGFYYD   E+PF+ D++A+I
Sbjct: 61  TPKDDAGVEIIRHSTAHLLGHAVKQLYPDVKMVIGPVIDDGFYYDIYSERPFTLDDMAKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M E+I +D   +K+    ++  + F  + E YK+ ++E +P + ++ LY   E+ D+
Sbjct: 121 EARMTELINQDYDVIKKMTPRDEVIKTFLERGETYKLRLVEDMPDETHMGLYHHQEYIDM 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +T  +K F KL K++GAYWRGD+    L RIYGTAW  +++L  YL  LEE+E
Sbjct: 181 CRGPHVPNTRFLKAF-KLTKMSGAYWRGDAKNEQLQRIYGTAWADKKQLKAYLQRLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KRDHRK+ + ++LFH+ E   G++FWH  GW I+Q L  YMR+ +  + Y EI TPQ++D
Sbjct: 240 KRDHRKIGKALNLFHMQEQAPGMVFWHPNGWTIWQVLEQYMRKVQKDNGYLEIKTPQIVD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW++SGHWD+Y   MF       T  + R +A+KPMNCP HV VFN GLKSYR+LP+R
Sbjct: 300 RSLWEKSGHWDNYGEMMFT------TASEKRDYAIKPMNCPCHVQVFNQGLKSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFGS +RNEPSGSLHG+MRVRGFTQDDAH+FCT  Q+  E L    L + +YKDFGF+
Sbjct: 354 LAEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTNAQIRQEALNFIKLTLDVYKDFGFD 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            I +KLSTRPEKRVG+D LWD AE  +   LD         ++  +  GEGAFYGPK E+
Sbjct: 414 HIQMKLSTRPEKRVGADELWDLAEQALADALDNAG------LDWELQAGEGAFYGPKIEF 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L+D IGR WQCGT+Q+DFNLP R NA +V    E+  PVM+HRA+ GS ERFIGI+IE+
Sbjct: 468 SLQDCIGRVWQCGTLQLDFNLPERLNAEFVGESGERERPVMLHRAILGSFERFIGILIEH 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  P WL+P Q +V  IT    +   ++ + L +      +D RNE I +KIRE +++
Sbjct: 528 YAGLFPTWLAPQQVVVMNITDKQADSVGDVVSKLNAKGYRAISDLRNEKIGFKIRERTLE 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           +IP ++I GDKE    ++ +R         ++L D I IL
Sbjct: 588 RIPFMLILGDKEVESGTVNVRTRTGDNLGSMNLDDFIKIL 627


>gi|262275836|ref|ZP_06053645.1| threonyl-tRNA synthetase [Grimontia hollisae CIP 101886]
 gi|262219644|gb|EEY70960.1| threonyl-tRNA synthetase [Grimontia hollisae CIP 101886]
          Length = 642

 Score =  695 bits (1793), Expect = 0.0,   Method: Composition-based stats.
 Identities = 307/647 (47%), Positives = 434/647 (67%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP    +T PDGS ++F    +  DVA  I   LAK  +A  +NGK  D  D +  + ++
Sbjct: 1   MPV---ITLPDGSQRSFDNPVSTYDVAADIGSGLAKACIAGRVNGKRVDACDLITEDANL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT +D   L +IRHSCAH++  A++ ++P+V++AIGP I++GFYYD D ++  + ++L
Sbjct: 58  EIITAKDEDGLEIIRHSCAHLLGHAIKQLFPDVKMAIGPTIDNGFYYDVDLDRSLTQEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             IEK+M+E+     P +K+ +S ++AR+ FES+ E YK+EIL E++   +   LY   E
Sbjct: 118 DAIEKRMKELAKTKYPVIKKNVSWQEARDTFESRGETYKMEILDENVSRDDRPGLYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV   G  + F K++ VAGAYWRG+S+  ML RIYGTA++ ++EL  +L  L
Sbjct: 178 YIDMCRGPHVPHMGFCQNF-KILNVAGAYWRGNSDNKMLQRIYGTAFSDKKELKAHLQRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRKL +++DL+H+ ++  G++FWH  GW +F+ L +++R K+ + +Y+E+  P
Sbjct: 237 EEAAKRDHRKLGKQLDLYHMQQEAPGMVFWHHNGWVVFRELEAFVRSKLAEYNYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW++SGHWD Y   MF       T  + R +ALKPMNCPGHV +FN GLKSYR+
Sbjct: 297 LIMDRVLWERSGHWDKYADYMFT------TQSENREYALKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT EQ+  E      ++   YK 
Sbjct: 351 LPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTPEQVQQEVTSCIKMVYDTYKT 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFE I+VKLSTRPE RVGSDA+WD AE  +   L+++       I   +L GEGAFYGP
Sbjct: 411 FGFEDIVVKLSTRPEMRVGSDAMWDRAEKALAEALESMN------IQFEILEGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF LP R  A YV   +E+  PVMIHRA+ GS+ERFIGI
Sbjct: 465 KIEFTLHDCLDRAWQCGTVQLDFALPERLGATYVGEDNERHTPVMIHRAILGSLERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE + G+ P WL+P QA+V  IT +  EY QE+A  L+        D RNE I +KIRE
Sbjct: 525 LIEEYAGHFPSWLAPQQAVVMNITDNQAEYVQEVAKKLQKAGFRASADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H++K++P +++CGD+E     I +R        K  + + I +L  E
Sbjct: 585 HTLKRVPYMLVCGDQEMEAGEIAVRTRKGKDLGKYKIDEFISLLENE 631


>gi|323704478|ref|ZP_08116056.1| threonyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum
           LX-11]
 gi|323535940|gb|EGB25713.1| threonyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum
           LX-11]
          Length = 634

 Score =  695 bits (1793), Expect = 0.0,   Method: Composition-based stats.
 Identities = 287/642 (44%), Positives = 411/642 (64%), Gaps = 16/642 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K+   DG+ + +    +  ++A+S+S+ LAK+A+   +NG++ +L  P+  +G +EI+T
Sbjct: 1   MKIILKDGTEREYESGISVYEIAKSLSQKLAKEALGGKLNGRIVELFTPINEDGKLEILT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D     +  H+ +HIMA+A++ ++  V++ IGP I++GFYYDFD ++PF+ D+ ++IE
Sbjct: 61  FDDEDGKKIYWHTSSHIMAQAIKRLYKNVKLTIGPAIDNGFYYDFDVDEPFTVDDFSKIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M +II  D    +  L  E+A +  E K E YKVE+++ +P    ++ YRQGE+ DLC
Sbjct: 121 DEMNKIIKEDLKLERFVLPREEAIKFMEEKGEPYKVELIKDLPQDATISFYRQGEFTDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+ STG VK   KL+ VAGAYWRGD    ML RIYG ++  +  L +YL  LEE++K
Sbjct: 181 AGPHLPSTGMVKSI-KLLSVAGAYWRGDERNKMLQRIYGISFPKKSMLDEYLNMLEEAKK 239

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQ 302
           RDHRKL +E+DLF I  +G G  F+H KG  +   L  + R++  K  Y+EI TP +L++
Sbjct: 240 RDHRKLGKELDLFSIHNEGPGFPFFHPKGMILRNILEDFWRKEHAKRGYQEIKTPIILNE 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW +SGHWD Y+ NM+  K       D   +A+KPMNCPG + V+N  + SYR+LP+RL
Sbjct: 300 ELWHRSGHWDHYKENMYFTKI------DDEDYAIKPMNCPGALLVYNSTMHSYRDLPLRL 353

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            E G V+R+E SG+LHGLMRVR FTQDDAH+F T +Q+ +E L +  LI   YK FGFE 
Sbjct: 354 CELGLVHRHELSGALHGLMRVRSFTQDDAHLFMTPDQVESEILGVIKLIDYFYKIFGFEY 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +GSD  W+ A N +   ++ I       +N  V  G+GAFYGPK ++ 
Sbjct: 414 F-VELSTRPENSIGSDEDWELATNALIKAMEHIG------LNYKVNEGDGAFYGPKIDFH 466

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LKD+IGR WQCGTIQ+DF +P RFN  YV    EK  PVM+HR VFGSIERFI I+ ENF
Sbjct: 467 LKDSIGRTWQCGTIQLDFQMPERFNCEYVGDDGEKHRPVMLHRVVFGSIERFIAILTENF 526

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P+Q  +  I+   + YAQ I   L  + + +E D RNE I YKIRE  ++K
Sbjct: 527 AGAFPTWLAPVQVKILPISDKHLAYAQNIHERLLENDIRVELDDRNEKIGYKIREAQMQK 586

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IP ++I GDKE    ++ +R          SL + +  + +E
Sbjct: 587 IPYMLILGDKEVEAGNVSVRSRKEGDLGSKSLQEFLSSILEE 628


>gi|254468875|ref|ZP_05082281.1| threonyl-tRNA synthetase [beta proteobacterium KB13]
 gi|207087685|gb|EDZ64968.1| threonyl-tRNA synthetase [beta proteobacterium KB13]
          Length = 652

 Score =  695 bits (1793), Expect = 0.0,   Method: Composition-based stats.
 Identities = 327/647 (50%), Positives = 452/647 (69%), Gaps = 15/647 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           + IK+T PDGSIK F    T SDVA  I   L + A+A  ++GK+ DL+  +  + ++ I
Sbjct: 17  NMIKITLPDGSIKEFENTITLSDVAYDIGEGLGRAALAGHVDGKLVDLTHEITSDAAVSI 76

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +T ++   L +IRHS AH++A AV+ ++PE QV IGP I+DGFYYDF   + F+ ++L+ 
Sbjct: 77  VTAKNDEGLDIIRHSTAHLLAYAVKELFPEAQVTIGPTIDDGFYYDFSYHRAFTPEDLSA 136

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEKKM E++  D    ++ +  + A + F  + E YK EI+ SIP  E VT+Y +G++ D
Sbjct: 137 IEKKMAELVKEDHAVTREVMKRDDAVKFFLDQGEKYKAEIIGSIPQDEEVTVYHEGKFSD 196

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG++K F KLMKVAGAYWRGDSN  ML RIYGTAW T+ +L  YL+ LEE+
Sbjct: 197 LCRGPHVPSTGKLKVF-KLMKVAGAYWRGDSNNEMLQRIYGTAWATKDDLKDYLHRLEEA 255

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
           EKRDHRKL + +DLFHI ++  G++FWH KGW ++Q + +YMR+K  D  Y+EI TP VL
Sbjct: 256 EKRDHRKLGKHLDLFHIQDNAPGMVFWHAKGWSLWQEIENYMRKKFVDYGYQEIKTPTVL 315

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D+ LW++SGHW++Y  NMF       T  + R +A+KPMNCPGHV +FNH L SYRELP+
Sbjct: 316 DKTLWEKSGHWENYHENMFI------THSEHRDYAVKPMNCPGHVQIFNHSLHSYRELPL 369

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLAEFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT++Q+ +E +  + +++  YKDFGF
Sbjct: 370 RLAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEDQILDEVINFNKMLMETYKDFGF 429

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
             I VKLSTRPEKRVGSD +WD +E  ++  L          ++  +  GEGAFYGPK E
Sbjct: 430 NDIEVKLSTRPEKRVGSDEVWDQSEKALEEALKATG------LDYEIQPGEGAFYGPKIE 483

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           Y+L+D++ R WQCGTIQ+DFNLP R NA YV+ +S K HPVM+HRA+ GS+ERFIGI+IE
Sbjct: 484 YVLRDSLNRLWQCGTIQLDFNLPVRLNAEYVDENSNKKHPVMLHRAIVGSMERFIGILIE 543

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           ++ G  P WL+P+QA+V  I+ S  +Y  ++ + LK + +  E+D RNE I YKIREHSI
Sbjct: 544 HYAGKFPTWLAPVQAVVMNISDSQAKYVGDVVDFLKKNDIRCESDLRNEKITYKIREHSI 603

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLP 647
            +IP +++ GD+E   + + +R         ++L + +  +  +   
Sbjct: 604 SRIPFMLVIGDREMQNKQVAVRTQQGEDLGVMTLEEFVETMNTQITA 650


>gi|289578715|ref|YP_003477342.1| threonyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
 gi|289528428|gb|ADD02780.1| threonyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
          Length = 635

 Score =  694 bits (1792), Expect = 0.0,   Method: Composition-based stats.
 Identities = 291/641 (45%), Positives = 412/641 (64%), Gaps = 17/641 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           LT  DG+ + F    T  ++A+SIS  LAK+AV    NGKV +L+  +  +G +EI+T +
Sbjct: 3   LTLKDGTQREFEKGMTVYEIAKSISERLAKEAVGGKFNGKVVELNTKIEEDGKLEILTFD 62

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D     +  H+ +HI+A+AV+ ++ +V++AIGP I++GFYYDFD ++PF++++   IE++
Sbjct: 63  DEEGKKIYWHTSSHILAQAVKRLFKDVKLAIGPAIDNGFYYDFDTDRPFTTEDFEAIEQE 122

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M +II  D    +  L  ++A +L E K E YKVE+++ IP  E ++ Y+QGE+ DLC G
Sbjct: 123 MNKIIKEDYKLERFVLPKDEAIKLMEEKDEPYKVELIKEIPEGEEISFYKQGEFTDLCAG 182

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PH+ STG VK   KL+ VAGAYW+GD    ML RIYG ++  +  L +YL+ LEE++KRD
Sbjct: 183 PHLMSTGMVKTI-KLLSVAGAYWKGDEKNKMLQRIYGISFPKKSMLDEYLHMLEEAKKRD 241

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHL 304
           HRKL +E+DLF I  +G G  F+H KG  I   L  + R   +K  Y+EI TP +L++ L
Sbjct: 242 HRKLGKELDLFSIHPEGPGFPFFHPKGMIIRNILEDFWRKEHMKHGYQEIKTPIILNEEL 301

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHWD Y+ NM+       T  D  T+A+KPMNCPG + V+   + SYR+LP+RL E
Sbjct: 302 WRRSGHWDHYKENMYF------TEIDGETYAIKPMNCPGAMLVYKSTMHSYRDLPLRLCE 355

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
            G V+R+E SG LHGLMRVR FTQDDAH+F T EQ+ +E L + NL+   YK FGFE   
Sbjct: 356 LGLVHRHELSGVLHGLMRVRSFTQDDAHLFMTPEQVEDEILGVINLVDYFYKIFGFEYF- 414

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           V+LSTRPE  +GSD  W+ A N +   L+ +       +   V  G+GAFYGPK ++ LK
Sbjct: 415 VELSTRPENSMGSDEDWELATNALISALNRVN------LPYKVNEGDGAFYGPKIDFHLK 468

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D+IGR WQCGTIQ+DF +P RF   Y+    EK  P+M+HR ++GSIERFIGI+ E+F G
Sbjct: 469 DSIGRTWQCGTIQLDFQMPERFELEYIGPDGEKHRPIMLHRVIYGSIERFIGILTEHFAG 528

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK-KI 603
             P WL+P+Q  V  I+     YAQ +   L  + +  E D RNE I YKIRE  ++ KI
Sbjct: 529 AFPTWLAPVQVRVLPISDKHYAYAQNVYGRLLENDIRAELDDRNEKIGYKIREAQLQKKI 588

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P ++I GDKE  + ++ +R         +SL + I  + KE
Sbjct: 589 PYMLIVGDKEVEQGTVSLRSRKEGDLGAISLSEFIEKILKE 629


>gi|326574765|gb|EGE24699.1| threonyl-tRNA synthetase [Moraxella catarrhalis O35E]
          Length = 639

 Score =  694 bits (1791), Expect = 0.0,   Method: Composition-based stats.
 Identities = 307/640 (47%), Positives = 430/640 (67%), Gaps = 15/640 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            + +T PDGSIK F  + T   VA+SI   LAK  VA  +NG++ D SDP+  + ++EII
Sbjct: 1   MVAITLPDGSIKQFDGNTTVMQVAQSIGAGLAKATVAGRVNGRLVDASDPITTDATVEII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TP+D   + +IRHS AH++  AV+ ++P+V++ IGP+I+DGFYYD   E+PF+ D++A+I
Sbjct: 61  TPKDDAGVEIIRHSTAHLLGHAVKQLYPDVKMVIGPVIDDGFYYDIYSERPFTLDDMAKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M ++I +D   +K+    ++  + F  + E YK+ ++E +P + ++ LY   E+ D+
Sbjct: 121 EARMIQLINQDYDVIKKMTPRDEVIKTFLERGETYKLRLVEDMPDETHMGLYHHQEYIDM 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +T  +K F KL K++GAYWRGD+    L RIYGTAW  +++L  YL  LEE+E
Sbjct: 181 CRGPHVPNTRFLKAF-KLTKMSGAYWRGDAKNEQLQRIYGTAWADKKQLKAYLQRLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KRDHRK+ + ++LFH+ E   G++FWH  GW I+Q L  YMR+ +  + Y EI TPQ++D
Sbjct: 240 KRDHRKIGKALNLFHMQEQAPGMVFWHPNGWTIWQVLEQYMRKVQKDNGYLEIKTPQIVD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW++SGHWD+Y   MF       T  + R +A+KPMNCP HV VFN GLKSYR+LP+R
Sbjct: 300 RSLWEKSGHWDNYGEMMFT------TASEKRDYAIKPMNCPCHVQVFNQGLKSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFGS +RNEPSGSLHG+MRVRGFTQDDAH+FCT  Q+  E L    L + +YKDFGF+
Sbjct: 354 LAEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTNAQIRQEALNFIKLTLDVYKDFGFD 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            I +KLSTRPEKRVG+D LWD AE  +   LD         ++  +  GEGAFYGPK E+
Sbjct: 414 HIQMKLSTRPEKRVGADELWDLAEQALADALDNAG------LDWELQAGEGAFYGPKIEF 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L+D IGR WQCGT+Q+DFNLP R NA +V    E+  PVM+HRA+ GS ERFIGI+IE+
Sbjct: 468 SLQDCIGRVWQCGTLQLDFNLPERLNAEFVGESGERERPVMLHRAILGSFERFIGILIEH 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  P WL+P Q +V  IT    +   ++ + L +      +D RNE I +KIRE +++
Sbjct: 528 YAGLFPTWLAPQQVVVMNITDKQADSVGDVVSKLNAKGYRAISDLRNEKIGFKIRERTLE 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           +IP ++I GDKE    ++ +R         ++L D I IL
Sbjct: 588 RIPFMLILGDKEVESGTVNVRTRTGDNLGSMNLDDFIKIL 627


>gi|329118120|ref|ZP_08246832.1| threonine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
 gi|327465780|gb|EGF12053.1| threonine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
          Length = 640

 Score =  694 bits (1791), Expect = 0.0,   Method: Composition-based stats.
 Identities = 301/643 (46%), Positives = 434/643 (67%), Gaps = 16/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +T PDGS++ +    T + +A SI   LAK  VA  +NG++ D  DP+  + +++II
Sbjct: 7   MLNITLPDGSVRQYEAPVTVAQIAASIGAGLAKATVAGKVNGRLVDACDPITEDSTVQII 66

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TP+D   + +IRHSCAH++  AV+ ++P+ ++ IGP+IEDGFYYD   E+PF+ +++A I
Sbjct: 67  TPKDKEGVEIIRHSCAHLVGHAVKQLYPDAKMVIGPVIEDGFYYDIATEKPFTPEDVAAI 126

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M+E+I +D   +K      +  + F+ + E YK+ ++E +P  E + LY   E+ D+
Sbjct: 127 EARMKELINQDYDVVKVMTPRAETIKTFQDRGEEYKLRLIEDMPEVEAMGLYHHQEYVDM 186

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW ++ EL  Y+  +EE+E
Sbjct: 187 CRGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWASKDELKAYIQRIEEAE 245

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL +++DLFH+ E+  G++FWH +GW ++Q +  +MR+++    Y E+ TPQ++D
Sbjct: 246 KRDHRKLGKQLDLFHLQEEAPGMVFWHPRGWALWQAIEQHMRKELDAAGYREVKTPQIMD 305

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           +  W++SGHWD+Y+ NMF       T  + R +A+KPMNCPGHV +FN+ L+SYR+LP+R
Sbjct: 306 KTFWERSGHWDNYKDNMFV------TQSEKREYAVKPMNCPGHVQIFNNSLRSYRDLPMR 359

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+  E  + + L++ IYK FGF 
Sbjct: 360 LAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVEEARRFNELLVRIYKQFGFH 419

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + VKLS RPEKR GSD +WD AE  ++  L          +    L GEGAFYGPK EY
Sbjct: 420 DVAVKLSLRPEKRAGSDDIWDKAEQGLRDALTACG------VEWEELPGEGAFYGPKIEY 473

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDAIGR WQCGT+Q+DF LP R +A YV   + +  PVM+HRA+ GS+ERFIGI+IEN
Sbjct: 474 HVKDAIGRSWQCGTLQLDFVLPERLDAEYVTESNGRARPVMLHRAILGSLERFIGILIEN 533

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G+ PLWL+P+Q +V  IT    +Y +++   L++    +E D RNE I YKIR++S  
Sbjct: 534 HAGSFPLWLAPVQMVVMNITEHQADYCRKVVEKLRAEGFRVELDLRNEKIGYKIRDNSQY 593

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           + P  I+ GDKE     + +R   +     + + D I  L +E
Sbjct: 594 RFPYQIVVGDKEKENGQVAVR-RKAEDLGSLKVDDFIAQLKRE 635


>gi|146307004|ref|YP_001187469.1| threonyl-tRNA synthetase [Pseudomonas mendocina ymp]
 gi|166225482|sp|A4XTS1|SYT_PSEMY RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|145575205|gb|ABP84737.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Pseudomonas
           mendocina ymp]
          Length = 640

 Score =  694 bits (1790), Expect = 0.0,   Method: Composition-based stats.
 Identities = 290/645 (44%), Positives = 426/645 (66%), Gaps = 18/645 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP    +T PDGS ++F    +  +VA+SI   LAK  +A  +NGK  D  D +  + ++
Sbjct: 1   MP---TITLPDGSQRSFDHPVSVLEVAQSIGAGLAKATLAGKVNGKQVDACDVIDTDATL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           +IITP+D   L +IRHSCAH++  AV+ ++P  ++ IGP+I++GFYYD   ++PF+ D++
Sbjct: 58  QIITPKDEEGLEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIDEGFYYDIAIDRPFTPDDM 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A IEK+M E+I +D   +K+     +  ELF S+ E YK+ +++ +P ++ + LY   E+
Sbjct: 118 AAIEKRMAELIDKDYDVIKKMTPRAEVIELFRSRGEEYKLRLIDDMPDEKAMGLYFHEEY 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            D+CRGPHV +T  +K F KL +++GAYWRGDS    L RIYGTAW  +++L  Y+  +E
Sbjct: 178 VDMCRGPHVPNTRFLKAF-KLTRISGAYWRGDSKNEQLQRIYGTAWADKKQLAAYIQRIE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+EKRDHR++ +++DLFH+ E+  G++FWH  GW ++Q L  YMR+ + ++ Y E+ TPQ
Sbjct: 237 EAEKRDHRRIGKQLDLFHLQEEAPGMVFWHPNGWTVYQVLEQYMRQVQRENGYVEVRTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHW +Y  NMF       T  + R +A+KPMNCP HV +FN GLKSYR+L
Sbjct: 297 VVDRILWERSGHWSNYAENMFT------TASENRDYAVKPMNCPCHVQIFNQGLKSYRDL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFG+ +RNEPSG+LHG+MRVRGF QDDAH+FCT++Q+  E      L + +Y DF
Sbjct: 351 PLRLAEFGACHRNEPSGALHGIMRVRGFVQDDAHIFCTEDQVKKEAADFIKLTLQVYADF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF  I +KLSTRP KRVGS+ LWD AE  +   L+      +  +      GEGAFYGPK
Sbjct: 411 GFTDIAMKLSTRPAKRVGSEELWDRAEGALADALN------ESGLAWEYQPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ L+D +GR+WQCGT+Q D NLP R +A Y+   + +  PVM+HRA+ GS ERFIG++
Sbjct: 465 IEFTLRDCLGRNWQCGTLQYDPNLPERLDASYIAEDNNRKRPVMLHRAILGSFERFIGML 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE++ G+ P WL+P QA++  IT    ++A+E    L       + D RNE I +KIREH
Sbjct: 525 IEHYAGSFPAWLAPTQAVIMNITDKQADFAREAEKTLNQSGFRAKVDLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           ++ K+P +++ GD+E   RS+ +R         + L      L +
Sbjct: 585 TLLKVPYLLVIGDREVETRSVAVRTREGVDLGSMPLEQFAAQLQQ 629


>gi|163795474|ref|ZP_02189441.1| Threonyl-tRNA synthetase [alpha proteobacterium BAL199]
 gi|159179460|gb|EDP63991.1| Threonyl-tRNA synthetase [alpha proteobacterium BAL199]
          Length = 640

 Score =  694 bits (1790), Expect = 0.0,   Method: Composition-based stats.
 Identities = 331/650 (50%), Positives = 455/650 (70%), Gaps = 16/650 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP+   +T PDGS++++    T + VA  I   LAK A    ++GK  DL  P+ R+  +
Sbjct: 1   MPA---ITLPDGSVRSYDQPVTPAQVAADIGPGLAKAAFVARVDGKFVDLGLPIHRDAQL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            ++T +D  ++  IRH CAH+MAEAV  ++P+ QV IGP IE+GFYYDF +  PF+ D+L
Sbjct: 58  ALVTRKDEAAVEHIRHDCAHVMAEAVLELYPDAQVTIGPSIENGFYYDFHRATPFTPDDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEK+M +I+ RD P  ++  + E+A   +++  E +KVE+ E+IP  E ++ YRQG +
Sbjct: 118 VAIEKRMHDIVDRDEPITREEWTREQAIAHYKTTDEPFKVELAEAIPEGEIISFYRQGNF 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPH  ST  +   FKLMKVAGAYWRGDS++PML RIYGTA+  Q++L  YL+ LE
Sbjct: 178 LDLCRGPHGPSTKTIGHAFKLMKVAGAYWRGDSSKPMLQRIYGTAFADQKQLDAYLHMLE 237

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQ 298
           E+EKRDHR+L RE+DLFHI E+  G +FWH KGW +++ + +Y+R ++++  Y EI TPQ
Sbjct: 238 EAEKRDHRRLGRELDLFHIQEEAVGSVFWHPKGWTLYRVIENYIRGRLEEGGYREIKTPQ 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D+ LW+ SGHWD +R  MF     DD     +  ALKPMNCPGHV V+  GLKSYR+L
Sbjct: 298 LIDRALWEASGHWDKFREAMFTANAEDD-----KVLALKPMNCPGHVQVYKQGLKSYRDL 352

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFGS +RNEPSG+LHG+MRVR FTQDDAH+FCT++Q+ +E ++  +L+ S+Y+DF
Sbjct: 353 PLRLAEFGSCHRNEPSGALHGIMRVRAFTQDDAHIFCTEDQITSESIRFCDLLKSVYRDF 412

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE I +K S RPE R G DA+WD AE  ++   D         ++T +  GEGAFYGPK
Sbjct: 413 GFEDIRIKFSDRPEVRAGEDAVWDRAEGALRSACDAAG------LDTTLNPGEGAFYGPK 466

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E++L+DAIGRDWQCGT+QVDF LP R +A YV    E+  PVM+HRA+FGS+ER+IGI+
Sbjct: 467 LEFVLRDAIGRDWQCGTLQVDFVLPERLDANYVAESGERKRPVMLHRAIFGSMERWIGIL 526

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE + G  P+WLSP+Q +V TIT+ A  YA+E+A   K+  L +  D RNE INYKIREH
Sbjct: 527 IEQYSGRFPMWLSPLQVVVATITNDADGYAEEVAAACKAAGLRVAMDRRNEKINYKIREH 586

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
           S  K+P I++ G +EA  RS+ +RR G    + ++L DA+  L  E+ PP
Sbjct: 587 SEAKVPAILVVGAREAEGRSVAVRRLGGQAQEVLALDDAVHRLKTEATPP 636


>gi|294340009|emb|CAZ88373.1| threonine tRNA synthetase [Thiomonas sp. 3As]
          Length = 639

 Score =  693 bits (1789), Expect = 0.0,   Method: Composition-based stats.
 Identities = 310/641 (48%), Positives = 442/641 (68%), Gaps = 15/641 (2%)

Query: 6   KLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITP 64
           ++T PDGS + F      +++A+SI   L K A+A  ++GK+ D S  + ++  + I+T 
Sbjct: 3   QITLPDGSKRAFEAPLMVAELAQSIGAGLFKAALAGKVDGKLVDTSYRLSQDAEVAIVTD 62

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           +D   + VIRHS AH++A AV+ ++P+ QV IGP+IE+GFYYDF  ++PF+ ++L +IE 
Sbjct: 63  KDAEGVEVIRHSTAHLLAYAVKDLYPDAQVTIGPVIENGFYYDFAYKRPFTPEDLEKIEA 122

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
           +M E+  +D P  ++ L  ++A + F+S  E YK EI+ SIPA E+V+LY +G + DLCR
Sbjct: 123 RMAELARKDEPVRRKVLPRDEAVDYFKSLGEHYKAEIIASIPAGEDVSLYSEGAFTDLCR 182

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV STG++K F KLMKVAGAYWRGD     L RIYGTAW  +++   YL+ L E+EKR
Sbjct: 183 GPHVPSTGRLKVF-KLMKVAGAYWRGDHRNAQLQRIYGTAWAKKEDQDAYLHALAEAEKR 241

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRKL +E+DLFH  E+  G+ FWH KGW ++Q +  YMR+  +D  Y+E+  PQ+LD  
Sbjct: 242 DHRKLGKELDLFHFQEEAPGLAFWHPKGWALWQAVEQYMRQVYRDSGYQEVKGPQILDVS 301

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SGHWD+Y  NMF       T  + R FA+KPMNCPGH+ +FN GL+SYR+LP+R  
Sbjct: 302 LWKRSGHWDNYSENMFF------TESEKRQFAVKPMNCPGHIQIFNSGLRSYRDLPIRYG 355

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSG+LHGL+RVRGFTQDD H+FCT++Q+  E    H   + +Y DFGF  I
Sbjct: 356 EFGSCHRNEPSGALHGLLRVRGFTQDDGHIFCTEDQIEAEVTAFHQQAMQVYTDFGFTDI 415

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            +K++ RPEKR+G +A+WD AE  ++  L     + Q+      L GEGAFYGPK EY +
Sbjct: 416 ALKIALRPEKRIGEEAVWDKAEAALRAALQACGVAWQE------LPGEGAFYGPKIEYHM 469

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           KD+IGR WQ GT+QVDF +P R +A YV+ HS++  PVM+HRA+ GS+ERFIG++IE++ 
Sbjct: 470 KDSIGRAWQVGTMQVDFMMPERLDAEYVDEHSQRVRPVMLHRAIVGSMERFIGVLIEHYA 529

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G +PLWL+P+QA+V  IT +  +YA+ +A  L      +E D RNE INYKIRE+++ K+
Sbjct: 530 GAMPLWLAPVQAVVMNITDAQADYARSVAQALTKQGFRVELDLRNEKINYKIRENALSKV 589

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P +++ GD+E    +I +R  G+     +SL      L++E
Sbjct: 590 PYLLVVGDQERDAGTIAVRARGNVNLGVLSLEALTQKLSQE 630


>gi|70733467|ref|YP_263242.1| threonyl-tRNA synthetase [Pseudomonas fluorescens Pf-5]
 gi|68347766|gb|AAY95372.1| threonyl-tRNA synthetase [Pseudomonas fluorescens Pf-5]
          Length = 629

 Score =  693 bits (1789), Expect = 0.0,   Method: Composition-based stats.
 Identities = 320/641 (49%), Positives = 446/641 (69%), Gaps = 14/641 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            I++T PDG+ + +    +  +VA SI   LAK AVA  +NG++ D    +  +  + I+
Sbjct: 1   MIRITLPDGACREYDQPLSVFEVAASIGSGLAKAAVAGRVNGQLVDCDYLLHSDARLSIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T  DP  L V+RHSCAH++A AV+ ++P  QVAIGP+IEDGF+YDF  E+PF++++L  I
Sbjct: 61  TARDPEGLEVLRHSCAHLLAMAVKQLFPSAQVAIGPVIEDGFFYDFAHERPFTTEDLELI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M  + A +    ++ LS E+A + F  + E YKVE++  +P    ++LYRQG++ DL
Sbjct: 121 EARMHSLAATNHSVRRRELSREQALQHFADQGEHYKVELIRDLPPDAVLSLYRQGDFEDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+RSTGQ++ F KL KVAGAYWRGD+    L RIYGT W ++ EL  YL  LE+++
Sbjct: 181 CRGPHLRSTGQLRAF-KLTKVAGAYWRGDARNAPLQRIYGTCWGSRPELEAYLLRLEQAQ 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           +RDHRKL +++DLFH  +   G +FWH KGW +FQ LI YMRR + +  Y+E+NTP V+D
Sbjct: 240 QRDHRKLGQQLDLFHFDDCAPGSVFWHAKGWTLFQELIGYMRRRQEQAGYQEVNTPDVMD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW +YR +MF       T +D RTFALKPMNCPG VA+F HG KSYR+LP+R
Sbjct: 300 RGLWETSGHWQNYRDHMFTT-----TTQDQRTFALKPMNCPGAVAIFGHGRKSYRDLPLR 354

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AEFG V+R EPSG+LHGL+RVR FTQDDAH+FCT +QM +EC     L+  IYK+FGF+
Sbjct: 355 IAEFGKVHRYEPSGALHGLLRVRHFTQDDAHIFCTPQQMQSECAATIALVFDIYKEFGFD 414

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
           ++ VKLSTRP+ R+GSD +WD  E  + G L ++       I+  +  GEGAFYGPK E+
Sbjct: 415 QVAVKLSTRPDHRIGSDEVWDQLEEALVGALQSMH------IDYRINPGEGAFYGPKLEF 468

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
           +L+DAIGRDWQCGT+QVD NLP RF   Y++   E+C PVM+HRA+FGS+ERFIGI++E+
Sbjct: 469 VLRDAIGRDWQCGTLQVDLNLPERFAISYIDERGERCQPVMLHRALFGSLERFIGILLEH 528

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G LPLWL+P QA+V  I+ +  +YA+ I++ L+ H L    D RNE I YKIREHS++
Sbjct: 529 HGGALPLWLAPQQAVVLNISEAQADYARAISDSLRRHGLRASADLRNEKIGYKIREHSLQ 588

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           K+P +++ G+KE     + +R        ++SL  A+  + 
Sbjct: 589 KVPYLLVVGEKEKDGGYVSLRSRNGEDLGRLSLEQALARMR 629


>gi|187477891|ref|YP_785915.1| threonyl-tRNA synthetase [Bordetella avium 197N]
 gi|123738749|sp|Q2L2M5|SYT_BORA1 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|115422477|emb|CAJ49002.1| threonyl-tRNA synthetase [Bordetella avium 197N]
          Length = 650

 Score =  693 bits (1789), Expect = 0.0,   Method: Composition-based stats.
 Identities = 318/648 (49%), Positives = 443/648 (68%), Gaps = 20/648 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAI--NG---KVCDLSDPV-REG 57
            +++T PDGS + +P   T ++VA+SI   LAK A+A  +  N    K+ D S  + ++ 
Sbjct: 1   MVQITLPDGSQRQYPGPVTVAEVAQSIGTGLAKAALAGRVTVNDAEPKLVDTSFRIDQDA 60

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSD 117
            + I+T +D   L +IRHS AH++A AV+S++P+ QV IGP+I++GFYYDF  ++PF+ +
Sbjct: 61  KLAIVTAKDADGLDLIRHSTAHLLAYAVKSLYPDAQVTIGPVIDNGFYYDFSYKRPFTPE 120

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +L  IEKKM E+  +D    ++  + + A   F+S  E YK EI+ SIP+ E ++LYR+G
Sbjct: 121 DLQAIEKKMAELARKDEVVTREEWTRDDAVAYFKSIGENYKAEIIASIPSNEKISLYREG 180

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           E+ DLCRGPHV STG++K F KLMK+AGAYWRGDSN  ML RIYGTAW T+ E   YL+ 
Sbjct: 181 EFIDLCRGPHVPSTGKLKVF-KLMKLAGAYWRGDSNNEMLQRIYGTAWATKDEQDAYLHM 239

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINT 296
           LEE+E+RDHRK+ R++DLFH  ++G G+IFWH KGW ++Q +  YMR   + + Y+E+  
Sbjct: 240 LEEAERRDHRKIGRDLDLFHFQDEGPGLIFWHPKGWTLWQQVEQYMRAVYRDNGYQEVKA 299

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           PQ+LD  LW+++GHWD+YR NMF       T  + R + LKPMNCPGHV +FN GL SYR
Sbjct: 300 PQILDLSLWKKTGHWDNYRENMFT------TESENRVYGLKPMNCPGHVQIFNAGLHSYR 353

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ELP+R  EFG  +RNEPSGSLHG+MRVRGFTQDD H+FCT++Q+ +EC     L+  +Y+
Sbjct: 354 ELPLRYGEFGQCHRNEPSGSLHGMMRVRGFTQDDGHIFCTEDQLQDECADFTALLQKVYR 413

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           DFGF +++ K++TRPEKR+GSD +WD AE  +   L              +  GEGAFYG
Sbjct: 414 DFGFTEVLYKVATRPEKRIGSDEIWDKAETALMESLRRTGC------EFEISPGEGAFYG 467

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK EY LKDAIGR WQCGTIQVDF++P R  A YV+ + ++  PVM+HRA+ GS+ERFIG
Sbjct: 468 PKIEYTLKDAIGRHWQCGTIQVDFSMPVRLGAEYVDQNDQRRAPVMLHRAILGSLERFIG 527

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           ++IEN  G +P WL+P+QA+V  I+  + EYA +I   LK     ++ D R E I  KIR
Sbjct: 528 MLIENHAGAMPPWLAPVQAVVCCISEPSAEYAAKITQSLKKQGFRVQADLRGEKITRKIR 587

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           EHS++K+P I++ GDKEA   ++ +R  G      +   D +  L ++
Sbjct: 588 EHSLQKVPYILVVGDKEAQNGTVAVRGLGGLDLGAIPFDDFVARLNED 635


>gi|254785570|ref|YP_003072999.1| threonyl-tRNA synthetase [Teredinibacter turnerae T7901]
 gi|259516754|sp|C5BSQ1|SYT_TERTT RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|237684404|gb|ACR11668.1| threonine--tRNA ligase [Teredinibacter turnerae T7901]
          Length = 637

 Score =  693 bits (1789), Expect = 0.0,   Method: Composition-based stats.
 Identities = 311/645 (48%), Positives = 439/645 (68%), Gaps = 18/645 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T P+GS + F    T  DVA  I   LAK  +A  ++GK  D    +  + ++
Sbjct: 1   MPV---ITLPNGSKREFSNPITVLDVAADIGPGLAKATLAGIVDGKEVDAGFTIEQDAAL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            I+T + P  L VIRHS AH++A+AV+S++PE QV IGP+I+DGFYYDF   + F+ ++L
Sbjct: 58  SIVTEKSPEGLEVIRHSTAHLLAQAVKSLFPEAQVTIGPVIDDGFYYDFAYSRAFTPEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A IEKKM E+  +D P  ++ L  ++A   F    E YK EI+ESIPA E+++LY+QG++
Sbjct: 118 AAIEKKMTELSEQDIPVSRRVLPRDEAVAFFRGIGEDYKAEIIESIPANEDLSLYKQGDF 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV STG++K F KLMKVAGAYWRGD+   ML RIYGTAW  +++L  YL+ LE
Sbjct: 178 EDLCRGPHVPSTGKLKYF-KLMKVAGAYWRGDAKNEMLQRIYGTAWANKKDLKAYLHRLE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+EKRDHRKL ++ DLFH+ E+  G++FWH KGW ++  +  YMR+ + ++ Y+EI TPQ
Sbjct: 237 EAEKRDHRKLGKKFDLFHLQEEAPGMVFWHPKGWSVYTAIEQYMRKVQRENGYKEIKTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHWD +R  MF V+       + R +A+KPMNCP H+ VFN GLKSYR+L
Sbjct: 297 VVDRSLWERSGHWDKFRDGMFTVE------SESRDYAVKPMNCPCHIQVFNQGLKSYRDL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R AEFGS +RNE SG+L G+MRVR FTQDD H+FC ++ + +E     +L+  +Y+DF
Sbjct: 351 PLRFAEFGSCHRNEASGTLQGIMRVRAFTQDDGHIFCAEDAIQSEVSIFTDLLYEVYRDF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE ++++LSTRPE+RVGS+ +WD +E  +   L+         +    L GEGAFYGPK
Sbjct: 411 GFEDVIIRLSTRPEQRVGSEEVWDKSEKALADALNA------KGLAFEYLPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD IGR WQCGTIQVDF++P+R +A +V     +  PVM+HRA+ GS ERFIGI+
Sbjct: 465 IEFSLKDCIGRVWQCGTIQVDFSMPARLDAQFVAEDGSRQVPVMLHRAILGSFERFIGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IEN++G  P WL+P Q +V  IT +  EYA+++ N L++    + +D RNE I +KIREH
Sbjct: 525 IENYEGAFPPWLAPEQVVVMNITDNQAEYAEKVRNSLQNEGFRVVSDLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +I+K+P +++ GD+E    S+ +R          S+ D   +L  
Sbjct: 585 TIQKVPYLLVVGDQEMENNSVAVRTREGKDLGTYSVDDFATLLAD 629


>gi|327481051|gb|AEA84361.1| threonyl-tRNA synthetase [Pseudomonas stutzeri DSM 4166]
          Length = 640

 Score =  693 bits (1789), Expect = 0.0,   Method: Composition-based stats.
 Identities = 292/645 (45%), Positives = 428/645 (66%), Gaps = 18/645 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS ++F    T ++VA+SI   LAK  +A  ++GK+ D  D +  + S+
Sbjct: 1   MP---TITLPDGSQRSFDHPVTVAEVAQSIGAGLAKATLAGKVDGKLVDACDLIERDASL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           +IITP+D   L +IRHSCAH++  AV+ ++P  ++ IGP+I++GFYYD   ++PF+ +++
Sbjct: 58  QIITPKDEEGLEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIDEGFYYDIAIDRPFTPEDM 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A IEK+M E+I +D   +K+     +  E+F S+ E YK+ +++ +P ++ + LY   E+
Sbjct: 118 AAIEKRMAELIDKDYDVIKKVTPRAEVIEVFTSRGEDYKLRLVDDMPDEQAMGLYYHEEY 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            D+CRGPHV +T  +K F KL +++GAYWRGDS    L RIYGTAW  +++L  Y+  +E
Sbjct: 178 VDMCRGPHVPNTRFLKAF-KLTRISGAYWRGDSKNEQLQRIYGTAWADKKQLAAYIQRIE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+EKRDHR++ +++DLFH  E+  G++FWH  GW ++Q L  YMR+ + ++ Y+E+ TPQ
Sbjct: 237 EAEKRDHRRIGKQLDLFHTQEEAPGMVFWHPAGWTLYQNLEQYMRQVQRENGYQEVRTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHW +Y  NMF       T  + R +A+KPMNCP HV +FN GLKSYR+L
Sbjct: 297 VVDRILWEKSGHWSNYAENMFT------TSSENRDYAVKPMNCPCHVQIFNQGLKSYRDL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG+ +RNEPSG+LHG+MRVRGFTQDDAH+FCT+EQ+  E      L + +Y DF
Sbjct: 351 PLRMAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEEQVKKEAADFIKLTLKVYADF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF  I +KLSTRP KRVGSD LWD AE+ +   L+      +  +      GEGAFYGPK
Sbjct: 411 GFSDIAMKLSTRPAKRVGSDELWDRAESALAEALN------ESGLAWEYQPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ L+D +GR+WQCGT+Q D NLP R +A YV   + +  PVM+HRA+ GS ERFIG++
Sbjct: 465 IEFTLRDCLGRNWQCGTLQYDPNLPERLDASYVAEDNSRQRPVMLHRAILGSFERFIGML 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE++ G  P WL+P QA++  IT     +A E+   L       + D RNE I +KIREH
Sbjct: 525 IEHYAGAFPAWLAPTQAVIMNITDKQAAFAIEVEKTLVQSGFRAKCDLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           ++ K P +++ GD+E   RS+ +R         + L     +L +
Sbjct: 585 TLLKTPYLLVIGDREVETRSVAVRSREGVDMGSMPLEQFAQLLAQ 629


>gi|317403269|gb|EFV83787.1| threonyl-tRNA synthetase [Achromobacter xylosoxidans C54]
          Length = 650

 Score =  693 bits (1789), Expect = 0.0,   Method: Composition-based stats.
 Identities = 317/648 (48%), Positives = 441/648 (68%), Gaps = 20/648 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAI-----NGKVCDLSDPVR-EG 57
            +++T PDGS + +P   T ++VA+SI   LAK A+   +     +  + D S  +  + 
Sbjct: 1   MVQITLPDGSQRQYPGPVTVAEVAQSIGAGLAKAALGGRVTFDGADSTLVDTSYRIEGDA 60

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSD 117
            + I+T +D   L +IRHS AH++A AV+ ++P+ QV IGP+I++GFYYDF  ++PF+ +
Sbjct: 61  RLAIVTAKDADGLDMIRHSTAHLLAYAVKELFPDAQVTIGPVIDNGFYYDFSYKRPFTPE 120

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +LA IEKKM E+  +D    ++  S + A E F+   E YK EI+ SIP+ E ++LYR+G
Sbjct: 121 DLAAIEKKMAELAKKDEVVTREVWSRDDAVEFFKGIGEKYKAEIIASIPSNEPLSLYREG 180

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           E+ DLCRGPHV STG++K F KLMKVAGAYWRGDS   ML RIYGTAW T++E   YL+ 
Sbjct: 181 EFIDLCRGPHVPSTGKLKVF-KLMKVAGAYWRGDSKNEMLQRIYGTAWATKEEQEAYLHM 239

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINT 296
           LEE+E+RDHRK+ RE+DLFH  ++  G+IFWH KGW ++Q +  YMR   + + Y+E+  
Sbjct: 240 LEEAERRDHRKIGRELDLFHFQDEAPGLIFWHPKGWALWQQVEQYMRSVYRDNGYQEVKA 299

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           PQ+LD  LW+++GHWD+YR NMF       T  + R + LKPMNCPGHV +FN GL SYR
Sbjct: 300 PQILDISLWKKTGHWDNYRENMFT------TESENRVYGLKPMNCPGHVQIFNAGLHSYR 353

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ELP+R  EFG  +RNEPSGSLHG+MRVRGFTQDD H+FCT+EQ+ +EC     L+  +Y+
Sbjct: 354 ELPLRYGEFGQCHRNEPSGSLHGMMRVRGFTQDDGHIFCTEEQLQDECADFTALLQKVYR 413

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           DFGF +++ K++TRPEKR+GSD +WD AE  +   L              +  GEGAFYG
Sbjct: 414 DFGFTEVLYKVATRPEKRIGSDEVWDTAEQALMESLRRTGC------EFEISPGEGAFYG 467

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK EY LKDAIGR WQCGTIQVDF++P R  A YV+ + ++  PVM+HRA+ GS+ERFIG
Sbjct: 468 PKVEYTLKDAIGRHWQCGTIQVDFSMPVRLGAEYVDQNDQRRPPVMLHRAILGSLERFIG 527

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           ++IEN  G +P WL+P+QA+V  I+  + +YA EI   LK     +E+D R E I  KIR
Sbjct: 528 MLIENHAGAMPPWLAPVQAVVCCISEPSADYAAEITQSLKKQGFRVESDLRGEKITRKIR 587

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           EHS++K+P I++ GDKE    ++ +R  G      ++  D +  L+++
Sbjct: 588 EHSLQKVPYILVVGDKEKQNGTVAVRGLGGLDLGAIAFDDFVARLSED 635


>gi|90021224|ref|YP_527051.1| threonyl-tRNA synthetase [Saccharophagus degradans 2-40]
 gi|123090560|sp|Q21KE0|SYT_SACD2 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|89950824|gb|ABD80839.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Saccharophagus
           degradans 2-40]
          Length = 636

 Score =  693 bits (1788), Expect = 0.0,   Method: Composition-based stats.
 Identities = 312/646 (48%), Positives = 439/646 (67%), Gaps = 18/646 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP    +T PDGS + +    +   VA  I   LAK  +A  ++GK  D S  + ++ S+
Sbjct: 1   MPV---ITLPDGSKREYDAPISVMGVAADIGPGLAKATLAGVVDGKEVDASFEITQDVSL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +    L VIRHS AH++A+AV+ ++PE QV IGP+IEDGFYYDF   + F+ ++L
Sbjct: 58  SIITAKSEEGLEVIRHSTAHLLAQAVKQLFPEAQVTIGPVIEDGFYYDFAYSRAFTPEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IE+KM+E+   D    ++ L  ++A   F    E YK +I++SIPA E ++LY+QG++
Sbjct: 118 VVIEEKMKELAKADFDVTRRVLPRDEASAYFRGIGEEYKAQIIDSIPANEELSLYKQGDF 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV STG+++ F KLMKVAGAYWRGDSN  ML+R+YGTAW ++++L  Y++ LE
Sbjct: 178 EDLCRGPHVPSTGKLEYF-KLMKVAGAYWRGDSNNEMLTRVYGTAWASKKDLKAYVHRLE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+EKRDHRKL ++ DLFHI E+  G++FWH  GW I+  +  YMR  +  + YEEI TPQ
Sbjct: 237 EAEKRDHRKLGKKFDLFHIQEEAPGMVFWHPNGWSIYTAIEEYMREVQRLNGYEEIKTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHWD +R NMF V+       + R +A+KPMNCP HV VFN GLKSYR+L
Sbjct: 297 VVDRSLWERSGHWDKFRDNMFTVE------SESRDYAVKPMNCPCHVQVFNQGLKSYRDL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFG  +RNE SG+L GLMRVRGF QDDAH+FC++  + +E     +L+  +YKDF
Sbjct: 351 PLRLAEFGCCHRNEASGTLQGLMRVRGFVQDDAHIFCSESMIQDEVSVFTDLLFKVYKDF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE ++++LSTRPE+RVGSD +WD AE  +   LD         +   +L GEGAFYGPK
Sbjct: 411 GFEDVIIRLSTRPEQRVGSDEVWDKAEKALSDALDA------KGLPWQLLPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD +GR WQCGTIQVDF++P R +A +V     +  PVM+HRA+ GS ERFIGI+
Sbjct: 465 IEFSLKDCLGRVWQCGTIQVDFSMPGRLDAQFVAEDGSRQVPVMLHRAILGSFERFIGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE ++G  P WL+P QA++  IT +  EY +++ N LK+    + +D RNE I +KIREH
Sbjct: 525 IEEYEGAFPAWLAPTQAVLLNITDNQAEYVKKVENSLKNKGFRVNSDLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +I+K+P +++ GD+E    S+ +R  G      +++     +L ++
Sbjct: 585 TIQKVPYLLVVGDQEVENNSVAVRGRGGEDLGVMTVDAFTALLEEQ 630


>gi|146282712|ref|YP_001172865.1| threonyl-tRNA synthetase [Pseudomonas stutzeri A1501]
 gi|166225484|sp|A4VM22|SYT_PSEU5 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|145570917|gb|ABP80023.1| threonyl-tRNA synthetase [Pseudomonas stutzeri A1501]
          Length = 640

 Score =  693 bits (1788), Expect = 0.0,   Method: Composition-based stats.
 Identities = 292/645 (45%), Positives = 427/645 (66%), Gaps = 18/645 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS ++F    T ++VA+SI   LAK  +A  ++GK+ D  D +  + S+
Sbjct: 1   MP---TITLPDGSQRSFDHPVTVAEVAQSIGAGLAKATLAGKVDGKLVDACDLIERDASL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           +IITP+D   L +IRHSCAH++  AV+ ++P  ++ IGP+I++GFYYD   ++PF+ +++
Sbjct: 58  QIITPKDEEGLEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIDEGFYYDIAIDRPFTPEDM 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A IEK+M E+I +D   +K+     +  E+F S+ E YK+ +++ +P ++ + LY   E+
Sbjct: 118 AAIEKRMAELIDKDYDVIKKVTPRAEVIEVFTSRGEDYKLRLVDDMPDEQAMGLYYHEEY 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            D+CRGPHV +T  +K F KL +++GAYWRGDS    L RIYGTAW  +++L  Y+  +E
Sbjct: 178 VDMCRGPHVPNTRFLKAF-KLTRISGAYWRGDSKNEQLQRIYGTAWADKKQLAAYIQRIE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+EKRDHR++ +++DLFH  E+  G++FWH  GW ++Q L  YMR+ + ++ Y+E+ TPQ
Sbjct: 237 EAEKRDHRRIGKQLDLFHTQEEAPGMVFWHPAGWTLYQNLEQYMRQVQRENGYQEVRTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHW +Y  NMF       T  + R +A+KPMNCP HV +FN GLKSYR+L
Sbjct: 297 VVDRILWEKSGHWSNYAENMFT------TSSENRDYAVKPMNCPCHVQIFNQGLKSYRDL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG+ +RNEPSG+LHG+MRVRGFTQDDAH+FCT+EQ+  E      L + +Y DF
Sbjct: 351 PLRMAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEEQVKKEAADFIKLTLKVYADF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF  I +KLSTRP KRVGSD LWD AE  +   L+      +  +      GEGAFYGPK
Sbjct: 411 GFSDIAMKLSTRPAKRVGSDELWDRAEGALAEALN------ESGLAWEYQPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ L+D +GR+WQCGT+Q D NLP R +A YV   + +  PVM+HRA+ GS ERFIG++
Sbjct: 465 IEFTLRDCLGRNWQCGTLQYDPNLPERLDASYVAEDNSRQRPVMLHRAILGSFERFIGML 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE++ G  P WL+P QA++  IT     +A E+   L       + D RNE I +KIREH
Sbjct: 525 IEHYAGAFPAWLAPTQAVIMNITDKQAAFAIEVEKTLVQSGFRAKCDLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           ++ K P +++ GD+E   RS+ +R         + L     +L +
Sbjct: 585 TLLKTPYLLVIGDREVETRSVAVRSREGVDMGSMPLEQFAQLLAQ 629


>gi|187929057|ref|YP_001899544.1| threonyl-tRNA synthetase [Ralstonia pickettii 12J]
 gi|238691850|sp|B2UGJ8|SYT_RALPJ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|187725947|gb|ACD27112.1| threonyl-tRNA synthetase [Ralstonia pickettii 12J]
          Length = 635

 Score =  693 bits (1788), Expect = 0.0,   Method: Composition-based stats.
 Identities = 321/643 (49%), Positives = 432/643 (67%), Gaps = 15/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +T PDGS + FP   T ++VA+SI   LAK A+A  ++G++ D S  +  +  + II
Sbjct: 1   MIAITLPDGSRREFPGPVTVAEVAQSIGAGLAKAALAGRVDGQMVDTSYTIDHDAKLAII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   + VIRHS AH++A AV+ ++P+ QV IGP+IE+GFYYDF  ++PF+ D+L  I
Sbjct: 61  TDKDADGVDVIRHSTAHLLAYAVKELYPDAQVTIGPVIENGFYYDFAYKRPFTPDDLVAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EKKM E+  +D    ++ LS + A +LF+   E YK EI+ SIP  + + LYR+G + DL
Sbjct: 121 EKKMGELAKKDEKVTREVLSRDDAVKLFQGMGEKYKAEIIASIPEDQEIGLYREGNFVDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG++K F KLMKVAGAYWRGD N  ML RIYGTAW  +++   YL+ LEE+E
Sbjct: 181 CRGPHVPSTGKLKVF-KLMKVAGAYWRGDHNNEMLQRIYGTAWAKREDQDAYLHMLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL RE+DLFHI E   G +FWH KGW ++Q +  YMRR  ++  Y+E+  PQ+LD
Sbjct: 240 KRDHRKLGRELDLFHIDEYSPGTVFWHPKGWTLWQEIEQYMRRVYRENGYQEVKGPQILD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+++GHWD YR NMF       T  + R +ALKPMNCPGH+ ++  G+KSYR+LP+R
Sbjct: 300 KTLWEKTGHWDKYRENMFI------TESEKREYALKPMNCPGHILIYKQGIKSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
             EFG+ +RNEPSG LHG+MRVRGFTQDD H+FCT++ +  E      L+  +YKDFGF 
Sbjct: 354 FGEFGACHRNEPSGGLHGIMRVRGFTQDDGHIFCTEDMIQAEVTAFTTLLQKVYKDFGFT 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
           +I+ KLSTRP+KR+G++  WD AE  +   L               L GEGAFYGPK EY
Sbjct: 414 EILYKLSTRPDKRIGTEESWDRAEAALAEGLRASGC------EFEYLPGEGAFYGPKIEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
           +LKDA+GR WQCGTIQVD NLP R +A +V     +  P+M+HRA+ GS+ERFIGI+IE 
Sbjct: 468 VLKDALGRQWQCGTIQVDPNLPERLDAEFVGEDGARHRPIMLHRAIVGSLERFIGILIEQ 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G LP WLSP+Q +V +IT S  EYAQ +A  L+        D RNE I YKIREHS++
Sbjct: 528 YAGALPTWLSPVQVVVLSITDSHAEYAQSVAQSLQKQGFRAVVDLRNEKIGYKIREHSVQ 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K+P  ++ GDKE  E  + +R  G+     + L   +  L  +
Sbjct: 588 KVPYQVVVGDKERDENQVAVRARGNVDLGSMPLSAFVERLKND 630


>gi|237745470|ref|ZP_04575950.1| threonyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
 gi|229376821|gb|EEO26912.1| threonyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
          Length = 650

 Score =  693 bits (1787), Expect = 0.0,   Method: Composition-based stats.
 Identities = 314/644 (48%), Positives = 433/644 (67%), Gaps = 15/644 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
             I +  PDGS + F    T S VA SI   LAK A+A  ++ ++ D S  +  +  + I
Sbjct: 15  KMISVRLPDGSKREFGEPVTVSQVAASIGSGLAKAALAGKVDDRLVDTSYLIDHDVDLSI 74

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +T  D   + ++RHS AH++A AV+ ++PE QV IGP+IE+GFYYDF  ++PF+ ++L  
Sbjct: 75  VTDRDVEGVDILRHSTAHLLAYAVKQLFPEAQVTIGPVIENGFYYDFSYKRPFTPEDLQA 134

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEKKM E+  ++    ++ L  ++A   F+S  E YK EI+ESIP  E+V+LY  G + D
Sbjct: 135 IEKKMTELARKNETVTRKVLPRDEAVAYFKSIGEDYKAEIIESIPQNEDVSLYTSGGFTD 194

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV + G++K F KLM+VAGAYWRGDS   ML RIYGTAW  +++   YL+ LEE+
Sbjct: 195 LCRGPHVPANGKLKVF-KLMRVAGAYWRGDSKNEMLQRIYGTAWAKKEDQDAYLHMLEEA 253

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVL 300
           EKRDHR+L R +DLFH  ++  G+IFWH KGW I+Q +  YMR+  + + Y+E+  PQ+L
Sbjct: 254 EKRDHRRLGRSLDLFHFQDEAPGLIFWHPKGWTIWQQVEQYMRKVYRDNGYQEVKGPQIL 313

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D+ LW++SGHWD+Y+ NMF       T  + R +A+KPMNCPGHV ++   L SYRELP+
Sbjct: 314 DRSLWEKSGHWDNYKENMFT------TESENRVYAIKPMNCPGHVQIYRSNLHSYRELPL 367

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R  EFG  +RNEPSGSLHG+MRVRGFTQDD H+FCT++Q+ +EC+   +L+  +YKDFGF
Sbjct: 368 RYGEFGQCHRNEPSGSLHGMMRVRGFTQDDGHIFCTEDQILDECVAFTDLLKKVYKDFGF 427

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
             I+ K++TRPEKRVGSD  WD AEN +   L              +  G+GAFYGPK E
Sbjct: 428 TDIIYKVATRPEKRVGSDEAWDKAENALIESLKRSGC------EFELSPGDGAFYGPKIE 481

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           Y L+DAIGR WQCGTIQVDF++P R  A YV   + +  PVMIHRA+ GS+ERFIGI+IE
Sbjct: 482 YTLRDAIGRMWQCGTIQVDFSMPMRLGAEYVAEDNTRKIPVMIHRAILGSLERFIGILIE 541

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           N  G +PLWL+P+QA+V  I+ +  EYA+ +   +K   L +E D RNE I YKIR+HS+
Sbjct: 542 NHAGAMPLWLAPVQAVVLNISDAQAEYAKSVVETMKKAGLRVEADLRNEKITYKIRDHSV 601

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            K+P +++ GDKE +  ++ +R  G      +S  + I  +  E
Sbjct: 602 NKVPYLLVVGDKEKNGNTVAVRARGGVDLGAMSADELIARMENE 645


>gi|330503839|ref|YP_004380708.1| threonyl-tRNA synthetase [Pseudomonas mendocina NK-01]
 gi|328918125|gb|AEB58956.1| threonyl-tRNA synthetase [Pseudomonas mendocina NK-01]
          Length = 640

 Score =  693 bits (1787), Expect = 0.0,   Method: Composition-based stats.
 Identities = 286/639 (44%), Positives = 424/639 (66%), Gaps = 15/639 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS ++F    +  +VA+SI   LAK  +A  +NGK  D  D +  + +++IITP+
Sbjct: 4   ITLPDGSQRSFDHPVSVLEVAQSIGAGLAKATLAGKVNGKQVDACDVIDTDATLQIITPK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  AV+ ++P  ++ IGP+I++GFYYD   ++PF+ +++A IEK+
Sbjct: 64  DEEGLEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIDEGFYYDIAIDRPFTPEDMAAIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M E+I +D   +K+     +  ELF+S+ E YK+ +++ +P ++ + LY   E+ D+CRG
Sbjct: 124 MAELIDKDYDVIKRMTPRAEVIELFKSRGEEYKLRLIDDMPDEQAMGLYFHEEYVDMCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +T  +K F KL +++GAYWRGDS    L R+YGTAW  +++L  Y+  +EE+EKRD
Sbjct: 184 PHVPNTRFLKAF-KLTRISGAYWRGDSKNEQLQRVYGTAWADKKQLAAYIQRIEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHL 304
           HR++ +++DLFH+ E+  G++FWH  GW ++Q L  YMR+ + +  Y E+ TPQV+D+ L
Sbjct: 243 HRRIGKQLDLFHLQEEAPGMVFWHPNGWTVYQVLEQYMRQVQREHGYVEVRTPQVVDRIL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHW +Y  NMF       T  + R +A+KPMNCP HV +FN GLKSYR+LP+RLAE
Sbjct: 303 WERSGHWSNYAENMFT------TASENRDYAVKPMNCPCHVQIFNQGLKSYRDLPLRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FG+ +RNEPSG+LHG+MRVRGF QDDAH+FCT++Q+  E      L + +Y DFGF  I 
Sbjct: 357 FGACHRNEPSGALHGIMRVRGFVQDDAHIFCTEDQVKKEAADFIRLTLQVYSDFGFTDIA 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +KLSTRP KRVGSD LWD AE  +   L+      +  +      GEGAFYGPK E+ L+
Sbjct: 417 MKLSTRPAKRVGSDELWDRAEGALAEALN------ESGLAWEYQPGEGAFYGPKIEFTLR 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D +GR+WQCGT+Q D NLP R +A Y+   + +  PVM+HRA+ GS ERFIG++IE++ G
Sbjct: 471 DCLGRNWQCGTLQYDPNLPERLDASYIAEDNNRKRPVMLHRAILGSFERFIGMLIEHYAG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
           + P WL+P QA++  IT    ++A+E    L       + D RNE I +KIREH++ K+P
Sbjct: 531 SFPAWLAPTQAVIMNITDKQADFAREAEKTLNQSGFRAKVDLRNEKIGFKIREHTLLKVP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +++ GD+E   RS+ +R         + +      L +
Sbjct: 591 YLLVIGDREVETRSVAVRTREGVDLGSMPIEQFAAQLQQ 629


>gi|307822740|ref|ZP_07652971.1| threonyl-tRNA synthetase [Methylobacter tundripaludum SV96]
 gi|307736344|gb|EFO07190.1| threonyl-tRNA synthetase [Methylobacter tundripaludum SV96]
          Length = 635

 Score =  693 bits (1787), Expect = 0.0,   Method: Composition-based stats.
 Identities = 320/648 (49%), Positives = 450/648 (69%), Gaps = 18/648 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP    +T PDGS + +    T  DVA SI   LAK  +A  +NG + D S P+ ++ ++
Sbjct: 1   MPV---ITLPDGSKREYEQTVTVMDVALSIGSGLAKATLAGKVNGTLVDASTPIDQDATL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           ++IT +D   + VIRHS AH++A+AV+ ++P  QV IGP+IE+GF+YDF  E+PF+ ++L
Sbjct: 58  QLITAKDEDGITVIRHSTAHLLAQAVKQLFPSAQVTIGPVIENGFFYDFAYERPFTPEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           + IEKKM++++A D P  +  LS ++A + F    EAYK EI+ESIPA E+++LY QG +
Sbjct: 118 SAIEKKMEQLVAEDYPIHRSVLSRDEAVKFFRDLGEAYKAEIIESIPANEDLSLYEQGGF 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV ST ++K F KLMK+AGAYWRG+S+  ML RIYGTAW  +++L  YL+ LE
Sbjct: 178 TDLCRGPHVPSTSKLKVF-KLMKIAGAYWRGNSDNEMLQRIYGTAWGDKKDLQAYLHRLE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+EKRDHRKLA+ +DLFH  E+  G++FWH KGW I+Q +  Y+R K++ + Y E+ TPQ
Sbjct: 237 EAEKRDHRKLAKTLDLFHSQEEAPGMVFWHEKGWVIYQQVEQYIREKLRVNGYGEVKTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHW+ +   +F       T  + R +A+KPMNCP HV ++N GLKSYR+L
Sbjct: 297 VVDRSLWERSGHWEKFGDMIFT------THSENRDYAIKPMNCPCHVQIYNQGLKSYRDL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFGS +RNEPSG+LHGLMRVR F QDDAH+FCT+ Q+ +E     +++  +YKDF
Sbjct: 351 PIRLAEFGSCHRNEPSGTLHGLMRVRNFVQDDAHIFCTEGQIQDEVSTFIDMLFDVYKDF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE++++KLSTRP  RVG D++WD AEN ++  L+T        +   +  GEGAFYGPK
Sbjct: 411 GFEEVIIKLSTRPANRVGDDSVWDKAENALELALNT------KGLKWDLQPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD IGR WQCGTIQVDF++P R +A Y+     +  PVM+HRA+ GS+ERFIGI+
Sbjct: 465 IEFSLKDCIGRVWQCGTIQVDFSMPGRLDATYIAEDGSRQVPVMLHRAILGSLERFIGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE   G  PLWLSP+Q +V  IT    EYA +I   L+   + ++ D RNE I +KIREH
Sbjct: 525 IEQHAGTFPLWLSPVQVVVLNITDRHAEYAAQIMLDLEKQGIRVKIDLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           S++++P ++I GDKE  ++SI +R         +S+ +    L +E  
Sbjct: 585 SMQRVPYLVIIGDKELEQQSITVRTQKGDDLGSLSIHEFTERLKQEIT 632


>gi|254491441|ref|ZP_05104620.1| threonyl-tRNA synthetase [Methylophaga thiooxidans DMS010]
 gi|224462919|gb|EEF79189.1| threonyl-tRNA synthetase [Methylophaga thiooxydans DMS010]
          Length = 641

 Score =  693 bits (1787), Expect = 0.0,   Method: Composition-based stats.
 Identities = 308/643 (47%), Positives = 447/643 (69%), Gaps = 15/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            I +T PDGS + F    T  D+A  I   LA+ A+A  +NG + D S  V  +  + I+
Sbjct: 1   MISVTLPDGSQRQFDNPVTIHDIAADIGTGLARAALAGKVNGTLVDTSHVVEQDADVAIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T  D   L +IRHS +H+MA+AV+ ++PE QV IGP+I+DGFYYDF   + F+ D+L +I
Sbjct: 61  TERDEEGLDIIRHSTSHLMAQAVKQLYPEAQVTIGPVIDDGFYYDFSYPEAFTPDDLNKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           +K+M+EI+ +D P  ++ ++ +   E+F    E YK EILE IP  E +++YRQG++ DL
Sbjct: 121 QKRMEEIVKQDLPVAREEITRDAGIEMFRDMGEIYKAEILEDIPKDEILSVYRQGDFVDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +TG++K F KLMK+AGAYWRG+S+  ML R+YGTAW  ++ L QYL+ LEE+E
Sbjct: 181 CRGPHVPNTGKLKAF-KLMKLAGAYWRGNSDNEMLQRVYGTAWQDKKALKQYLHRLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD 301
           KRDHRK+A+ +DLFH+ E+ +G+IFWH  GW+I++ + +Y+R  ++ +DY+E+ TPQV+D
Sbjct: 240 KRDHRKIAKNLDLFHLQEEAAGMIFWHDNGWQIYRVVENYIRDVLRDNDYQEVRTPQVVD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW++SGHWD +   +F       T  + R +A+KPMNCP H+ +FN GLKSYR+LP+R
Sbjct: 300 RTLWEKSGHWDKFGDMIF------STHSENRDYAVKPMNCPCHIQIFNQGLKSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AEFGS +RNEPSG+LHGLMR+RGFTQDDAH+FCT++Q+ +E      L+  +Y DFGF 
Sbjct: 354 MAEFGSCHRNEPSGTLHGLMRLRGFTQDDAHIFCTEDQIQSEVATFIELLHEVYADFGFN 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
           +I+VKLSTRPE RVGSD +WD AE  ++  L+         ++  +  GEGAFYGPK E+
Sbjct: 414 EIIVKLSTRPENRVGSDEVWDKAEKALEDALNAA------DLDWELQPGEGAFYGPKIEF 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            LKD + R WQCGTIQVDF++P R +A +V   + K  PVM+HRA+ GS+ERFIGI+IE 
Sbjct: 468 SLKDCLSRVWQCGTIQVDFSMPGRLDAHFVADDNSKQVPVMLHRAILGSLERFIGILIEE 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  P WL+P Q +V  I+    EY Q++A  L+     ++TD RNE I +KIREH+++
Sbjct: 528 YAGAFPTWLAPKQVMVMGISDKQSEYVQKVAKDLQKQGFRVDTDLRNEKIGFKIREHTLR 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           ++P +I+ G++EA + ++ +R         + L D + +L K+
Sbjct: 588 RVPYLIVVGEREAQDNAVAVRTRKGEDLGAMQLEDFVGLLEKD 630


>gi|254515029|ref|ZP_05127090.1| threonyl-tRNA synthetase [gamma proteobacterium NOR5-3]
 gi|219677272|gb|EED33637.1| threonyl-tRNA synthetase [gamma proteobacterium NOR5-3]
          Length = 645

 Score =  692 bits (1786), Expect = 0.0,   Method: Composition-based stats.
 Identities = 312/646 (48%), Positives = 435/646 (67%), Gaps = 18/646 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS + F    T ++VA  I   LAK A+A  ++G+  D S  +  +  +
Sbjct: 1   MP---TITLPDGSQREFSNAVTVAEVAADIGPGLAKAALAGVVDGREVDTSFSIDADAQL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT  D   + +IRHS AH++A AVQ ++P  QV IGP+I+DGFYYDF  E  F+ D+L
Sbjct: 58  AIITERDDAGVELIRHSTAHLLAMAVQDLFPGTQVTIGPVIDDGFYYDFAGEHQFTPDDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IE++M +I+A D P  +  +  ++A   FE   E+YKVEI+  +P  E ++LY+QG W
Sbjct: 118 PKIEERMAQIVADDVPVERIVMDRDEAAAAFEKMGESYKVEIIRDLPEGEEISLYKQGAW 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV STG++  F KL K+AGAYWRGDSN  ML R+YGTAW  +++L QYL  +E
Sbjct: 178 MDLCRGPHVPSTGKLGAF-KLTKLAGAYWRGDSNNEMLQRVYGTAWANKKQLKQYLRRIE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+EKRDHRK+ +++DLFH  E+  G++FWH +GW I+Q +  YMR + +  DY+EI TPQ
Sbjct: 237 EAEKRDHRKIGKKLDLFHTQEEAPGMVFWHPQGWTIYQVIEQYMREQQRAQDYQEIKTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D  LW++SGH D +  +MF +        D R FA+KPMNCP HV VFN GL+SYR+L
Sbjct: 297 LVDMSLWEKSGHADKFGDDMFMLT------ADEREFAVKPMNCPCHVQVFNQGLRSYRDL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFGS +RNEPSGSLHG+MRVRGFTQDD H+FCT+EQ+  E     + + ++Y DF
Sbjct: 351 PLRLAEFGSCHRNEPSGSLHGIMRVRGFTQDDGHIFCTEEQIQPEVSTFIDFLHAVYADF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF++++ +LSTRP +RVG+D  WD AE  +   LD         ++   L GEGAFYGPK
Sbjct: 411 GFDEVIYRLSTRPAQRVGTDEDWDRAEKALADALDA------QGLDWQELPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD IGR WQ GTIQVDF++P R +A YV     +  PVM+HRA+ GS ERFIGI+
Sbjct: 465 IEFSLKDCIGRVWQMGTIQVDFSMPGRLDAQYVAEDGSRKTPVMLHRAILGSFERFIGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IENF+G+ P+WL+P QA+V  IT    EY + + + LK+    + +D RNE I +KIREH
Sbjct: 525 IENFEGSFPVWLAPKQAVVINITEKQDEYVRFVEDSLKNKGFRVFSDLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +I+++P +++ G+KE   +++ +R         +SL     IL ++
Sbjct: 585 TIQRVPYLVVVGEKEVEAKTVAVRSRNGEDLGTMSLEAFTEILDQD 630


>gi|241663242|ref|YP_002981602.1| threonyl-tRNA synthetase [Ralstonia pickettii 12D]
 gi|240865269|gb|ACS62930.1| threonyl-tRNA synthetase [Ralstonia pickettii 12D]
          Length = 635

 Score =  692 bits (1786), Expect = 0.0,   Method: Composition-based stats.
 Identities = 322/643 (50%), Positives = 432/643 (67%), Gaps = 15/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +T PDGS + FP   T ++VA+SI   LAK A+A  ++G++ D S  + R+  + II
Sbjct: 1   MIAITLPDGSRREFPGPVTVAEVAQSIGAGLAKAALAGRVDGQMVDTSFTIDRDAKLAII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   + VIRHS AH++A AV+ ++P+ QV IGP+IE+GFYYDF  ++PF+ ++L  I
Sbjct: 61  TDKDADGVDVIRHSTAHLLAYAVKELFPDAQVTIGPVIENGFYYDFAYKRPFTPEDLVAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EKKM E+  +D    ++ LS ++A +LFE   E YK EI+ SIP  + + LYR+G + DL
Sbjct: 121 EKKMTELAKKDEKVTREVLSRDEAVKLFEGMGEKYKAEIIASIPEDQEIGLYREGNFVDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG++K F KLMKVAGAYWRGD N  ML RIYGTAW  +++   YL+ LEE+E
Sbjct: 181 CRGPHVPSTGKLKVF-KLMKVAGAYWRGDHNNEMLQRIYGTAWAKKEDQEAYLHMLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL RE+DLFHI E   G +FWH KGW ++Q +  YMRR  ++  Y+E+  PQ+LD
Sbjct: 240 KRDHRKLGRELDLFHIDEYSPGTVFWHPKGWTLWQEIEQYMRRVYRENGYQEVKGPQILD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+++GHWD YR NMF       T  + R +ALKPMNCPGH+ ++  G+KSYR+LP+R
Sbjct: 300 KTLWEKTGHWDKYRENMFI------TESEKREYALKPMNCPGHILIYKQGIKSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
             EFG+ +RNEPSG LHG+MRVRGFTQDD H+FCT++ +  E      L+  +YKDFGF 
Sbjct: 354 FGEFGACHRNEPSGGLHGIMRVRGFTQDDGHIFCTEDMIQAEVTAFTTLLQKVYKDFGFT 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
           +I+ KLSTRP+KR+G++  WD AE  +   L               L GEGAFYGPK EY
Sbjct: 414 EILYKLSTRPDKRIGTEESWDRAEAALAEGLRASGC------EFEYLPGEGAFYGPKIEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
           +LKDA+GR WQCGTIQVD NLP R +A +V     +  P+M+HRA+ GS+ERFIGI+IE 
Sbjct: 468 VLKDALGRQWQCGTIQVDPNLPERLDAEFVGEDGARHRPIMLHRAIVGSLERFIGILIEQ 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G LP WLSP+Q  V +IT S  EYAQ +   L+        D RNE I YKIREHS++
Sbjct: 528 YAGALPTWLSPVQVAVLSITDSHAEYAQSVVQSLQKQGFRAVVDLRNEKIGYKIREHSVQ 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K+P  I+ GDKE  E  + +R  G+     + L   +  L  +
Sbjct: 588 KVPYQIVVGDKERDENQVAVRARGNVDLGSMPLSAFVERLQND 630


>gi|114332291|ref|YP_748513.1| threonyl-tRNA synthetase [Nitrosomonas eutropha C91]
 gi|122313048|sp|Q0ADN4|SYT_NITEC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|114309305|gb|ABI60548.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Nitrosomonas
           eutropha C91]
          Length = 635

 Score =  692 bits (1786), Expect = 0.0,   Method: Composition-based stats.
 Identities = 323/640 (50%), Positives = 445/640 (69%), Gaps = 15/640 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +  PDG+ K F    T  DVAESI   LA+ A+A  +NG++ DLS+P+  +  + +IT +
Sbjct: 4   VRLPDGTDKVFDYPVTVLDVAESIGPGLARVALAGKLNGRLVDLSEPIEIDSDLVLITNK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           DP  L +IRHSCAH++A AV+ ++P  QV IGP+IEDGFYYDF  E+PF+ ++LA IEK+
Sbjct: 64  DPEGLEIIRHSCAHLLAHAVKELFPSAQVTIGPVIEDGFYYDFSYERPFTPEDLAAIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           MQEI  R+    ++     KA   F+   E YK +I+ SIP  E V+LY QG++ DLCRG
Sbjct: 124 MQEISRRNLKIERKVWDRSKAIGFFKDLGEHYKAQIIASIPNDEPVSLYSQGDFTDLCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV  T ++K F KLMK+AGAYWRGDS   ML RIYGTAW + +E   YL  LEE+EKRD
Sbjct: 184 PHVPYTSRIKVF-KLMKIAGAYWRGDSKNEMLQRIYGTAWVSSEEQNNYLRRLEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHL 304
           HRKL +++DLFH+ E+  G+++WH KGW I+Q +  YMR+ + K+ Y EI TPQVLD  L
Sbjct: 243 HRKLGKQLDLFHMQEEAPGMVYWHPKGWAIWQQIEQYMRQVLAKNGYVEIRTPQVLDISL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHW+++R NMF       T  + R +A+KPMNCPGHV VFNHGL+SYR+LP+RLAE
Sbjct: 303 WEKSGHWENFRENMFI------TESESRHYAIKPMNCPGHVQVFNHGLRSYRDLPLRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNE SG+LHGLMRVR FTQDDAH+FCT++Q+  E  K  +L+  +Y DFGF + +
Sbjct: 357 FGSCHRNEASGALHGLMRVRSFTQDDAHIFCTEDQVLEEVTKFIDLLNQVYIDFGFHENL 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +KLSTRP +RVG++  WD      +         +Q  +N  +  GEGAFYGPK E+ LK
Sbjct: 417 IKLSTRPAQRVGTEEQWD------RAEAALAAALNQKELNWELQPGEGAFYGPKIEFTLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D++GR WQCGT+Q+DF++P+R  A Y+   + K  PVM+HRA+ GS+ERFIGI+IE+  G
Sbjct: 471 DSLGRKWQCGTLQLDFSMPARLGAGYIAEDNTKKIPVMLHRAILGSMERFIGILIEHHAG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
            LP+WLSP Q +V  I+ +  +Y Q I N LK + + + +D RNE I+YKIREHS++K+P
Sbjct: 531 ALPVWLSPDQVVVLNISRNQADYVQSITNELKQNDIRVSSDLRNEKISYKIREHSLQKVP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            +I+ GDKE   +++ +R   +     +SL   + ++ KE
Sbjct: 591 YLIVVGDKEVENQTVTVRGRSNHDHGAMSLEGFVTLIRKE 630


>gi|256822932|ref|YP_003146895.1| threonyl-tRNA synthetase [Kangiella koreensis DSM 16069]
 gi|256796471|gb|ACV27127.1| threonyl-tRNA synthetase [Kangiella koreensis DSM 16069]
          Length = 639

 Score =  692 bits (1785), Expect = 0.0,   Method: Composition-based stats.
 Identities = 315/649 (48%), Positives = 434/649 (66%), Gaps = 18/649 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS + F    +  DVA  I   LAK A+A  ++G + D S  +  + ++
Sbjct: 1   MPV---ITLPDGSKREFDHAVSVYDVANDIGPGLAKAALAGKVDGHMVDTSFVIENDAAL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT  D   L VIRHS AH++A+AVQ ++  VQV IGP+I++GFYYDF  E+PFS D+L
Sbjct: 58  AIITERDEDGLEVIRHSTAHLLAQAVQRLFDNVQVTIGPVIDNGFYYDFATEKPFSEDDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEK+M++I   +    +  +  ++A   F +  E YK EI+ESIP  E ++LYRQG++
Sbjct: 118 RAIEKEMEKITKENLQVERTEMGRDEAVAFFRNMGEEYKAEIIESIPQNETLSLYRQGDF 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV ST ++K F KLMKVAGAYWRGDSN  ML RIYGTAW  +++L  YL+ LE
Sbjct: 178 IDLCRGPHVPSTSKLKAF-KLMKVAGAYWRGDSNNAMLQRIYGTAWTNKKDLKAYLHRLE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+EKRDHRK+A+ +DLFHI E+  G+IFWH KGW I++TL  Y+R ++K+ DY+E+ TPQ
Sbjct: 237 EAEKRDHRKIAKALDLFHIQEEAPGMIFWHDKGWTIYKTLEQYIRERLKEHDYQEVKTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D+ LW++SGHWD +  +MF +K       D R +A+KPMNCP HV +FN GLKSYR+L
Sbjct: 297 MVDRSLWEKSGHWDKFGDDMFTLK------SDERDYAIKPMNCPCHVQIFNVGLKSYRDL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFGS +RNEPSG+LHG+MR+R F QDDAH+FCT++Q+  E  K   ++  +Y DF
Sbjct: 351 PLRMAEFGSCHRNEPSGALHGIMRLRNFVQDDAHIFCTEDQIQEEVSKFIAMLYDVYADF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF  ++VKLSTRPE+RVG+D  WD AE  +   L        + I      GEGAFYGPK
Sbjct: 411 GFTDVIVKLSTRPEQRVGTDQEWDKAEAALADALKA------NSIQFEYQPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD + R WQCGTIQVDF++P R +A YV    E+  PVM+HRA+ GS+ERFIGI+
Sbjct: 465 LEFTLKDCLERHWQCGTIQVDFSMPGRLDAEYVAESGERETPVMLHRAILGSLERFIGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE F G  P WL+P QA+V  IT    ++ Q++   LK+    + +D RNE I +KIRE 
Sbjct: 525 IEEFAGKFPAWLAPTQAVVMNITDKQADFCQKVVESLKNKGFRVNSDLRNEKIGFKIREQ 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLP 647
           ++ ++P +++ GD+E     + +R         +S+     +L  E   
Sbjct: 585 TLARVPFLLVVGDREVENNHVAVRTRDGEDLGSMSIEAFAELLEAEVTK 633


>gi|154253109|ref|YP_001413933.1| threonyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1]
 gi|189083615|sp|A7HWJ3|SYT_PARL1 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|154157059|gb|ABS64276.1| threonyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1]
          Length = 652

 Score =  692 bits (1785), Expect = 0.0,   Method: Composition-based stats.
 Identities = 329/658 (50%), Positives = 445/658 (67%), Gaps = 16/658 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IKL  PDGS++   V   G   AESI++SLAKKAVA+ I+G++ DLS  + R+  +EI+
Sbjct: 1   MIKLKLPDGSVREHEVPLDGLAFAESIAKSLAKKAVAIKIDGQMKDLSTVIDRDAEVEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T E P  + ++RH  +H+MAEAVQ ++P  QV IGP+IE+GFYYDF + +PF +++L +I
Sbjct: 61  TRETPDGVDLLRHDASHVMAEAVQELFPGTQVTIGPVIENGFYYDFARAEPFKAEDLEKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E++M+EI+ RD    ++    + A E F+   E YK EI+ SIPA E V++YRQG W DL
Sbjct: 121 EQRMREIVDRDETITREVWDRDAAVEYFKKIGEIYKAEIIASIPAGEQVSVYRQGNWLDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ STG++ K FKL K+AGAYWRGDS   ML RIYGT W  + +L  YL  +EE+E
Sbjct: 181 CRGPHLPSTGKLGKAFKLTKLAGAYWRGDSRNEMLQRIYGTCWANENDLKAYLTMVEEAE 240

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           +RDHRK+ REMDLFH+ E+  G +FWH KGW+I+Q L  Y+RR+I    Y E+ TPQ+LD
Sbjct: 241 RRDHRKIGREMDLFHLQEEAQGSVFWHPKGWRIWQALEQYVRRRIDAAGYVEVRTPQLLD 300

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRT--------FALKPMNCPGHVAVFNHGLK 353
              W+QSGHW  YR NMF V     +  +            A+KPMNCP H+ +F  G+K
Sbjct: 301 SKFWEQSGHWGKYRENMFVVPDEVPSTDEDAPVLSGKAKLMAIKPMNCPAHIQIFKQGVK 360

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYR+LP+R+AEFG  +RNEP G+LHGLMRVR  TQDDAH+FCT++Q+  E      L+ S
Sbjct: 361 SYRDLPLRMAEFGCCHRNEPHGALHGLMRVRQMTQDDAHIFCTEDQIKEETEAFVALLES 420

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           +Y+D GF    ++L+TRP+ R G+D  WD AE  ++  L  +              GEGA
Sbjct: 421 VYEDMGFTGTKLRLATRPDVRAGTDETWDKAEKALEEALKALGK------EFDFAPGEGA 474

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK E+ L+DAIGR WQ GT+Q+DF LP R +A Y+     K  PVM+HRA+ GS+ER
Sbjct: 475 FYGPKLEFHLRDAIGRSWQLGTLQLDFVLPERLDASYIGEDGNKHRPVMLHRAILGSLER 534

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           FIGI+IEN++G  P+WL+P+QA+VTTITS A  YA+E+   L+   +  E D RNE INY
Sbjct: 535 FIGILIENYEGRFPMWLAPVQAVVTTITSDADPYAEEMLQKLRDAGIRAELDLRNEKINY 594

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           K+REHS+ K+P I + G +EA E ++ IRR GS   Q + L +AI  L +E+ PPD +
Sbjct: 595 KVREHSVAKVPAIFVAGKREAEEGTVSIRRLGSQQQQTMKLDEAIKALAEEATPPDMR 652


>gi|311105446|ref|YP_003978299.1| threonyl-tRNA synthetase [Achromobacter xylosoxidans A8]
 gi|310760135|gb|ADP15584.1| threonyl-tRNA synthetase [Achromobacter xylosoxidans A8]
          Length = 650

 Score =  692 bits (1785), Expect = 0.0,   Method: Composition-based stats.
 Identities = 316/648 (48%), Positives = 442/648 (68%), Gaps = 20/648 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAI-----NGKVCDLSDPVR-EG 57
            +++T PDGS + +P   T ++VA+SI   LAK A+   +     + K+ D S  +  + 
Sbjct: 1   MVQITLPDGSQRQYPGPVTVAEVAQSIGTGLAKAALGGRVTFEGSDSKLVDTSFRIEGDA 60

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSD 117
            + I+T +D   L +IRHS AH++A AV+ ++P+ QV IGP+I++GFYYDF  ++PF+ +
Sbjct: 61  RLAIVTAKDADGLDLIRHSTAHLLAYAVKELFPDAQVTIGPVIDNGFYYDFSYKRPFTPE 120

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +LA IEKKM E+  +D    ++  S + A E F+   E YK EI+ SIP+ E ++LYR+G
Sbjct: 121 DLAAIEKKMAELAKKDEVVTREEWSRDDAVEFFKGIGEKYKAEIIASIPSNEPLSLYREG 180

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           ++ DLCRGPHV STG++K F KLMKVAGAYWRGDS   ML RIYGTAW T++E   YL+ 
Sbjct: 181 DFIDLCRGPHVPSTGKLKVF-KLMKVAGAYWRGDSKNEMLQRIYGTAWATKEEQEAYLHM 239

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINT 296
           LEE+E+RDHRK+ RE++LFH  ++  G+IFWH KGW ++Q +  YMR   + + Y+E+  
Sbjct: 240 LEEAERRDHRKIGRELELFHFQDEAPGLIFWHPKGWALWQQVEQYMRSVYRDNGYQEVKA 299

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           PQ+LD  LW+++GHWD+YR NMF       T  + R + LKPMNCPGHV +FN GL SYR
Sbjct: 300 PQILDISLWKKTGHWDNYRENMFT------TESENRVYGLKPMNCPGHVQIFNAGLHSYR 353

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ELP+R  EFG  +RNEPSGSLHG+MRVRGFTQDD H+FCT+EQ+ +EC     L+  +Y+
Sbjct: 354 ELPLRYGEFGQCHRNEPSGSLHGMMRVRGFTQDDGHIFCTEEQLQDECADFTALLQKVYR 413

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           DFGF +++ K++TRPEKR+GSD +WD AE  +   L              V  GEGAFYG
Sbjct: 414 DFGFTEVLYKVATRPEKRIGSDEVWDTAEAALMESLRRTGC------EFEVSPGEGAFYG 467

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK EY LKDAIGR WQCGTIQVDF++P R  A YV+ + ++  PVM+HRA+ GS+ERFIG
Sbjct: 468 PKVEYTLKDAIGRHWQCGTIQVDFSMPVRLGAEYVDQNDQRRPPVMLHRAILGSLERFIG 527

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           ++IEN  G +P WL+P+QA+V  I+  + +YA EI   LK     +E+D R E I  KIR
Sbjct: 528 MLIENHAGAMPPWLAPVQAVVCCISEPSADYAAEITQSLKKQGFRVESDLRGEKITRKIR 587

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           EHS++K+P I++ GDKE    ++ +R  G      ++  + +  L+++
Sbjct: 588 EHSLQKVPYILVVGDKEKQNGTVAVRGLGGLDLGAIAYDEFVARLSED 635


>gi|192360042|ref|YP_001982990.1| threonyl-tRNA synthetase [Cellvibrio japonicus Ueda107]
 gi|238692463|sp|B3PL16|SYT_CELJU RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|190686207|gb|ACE83885.1| threonyl-tRNA synthetase [Cellvibrio japonicus Ueda107]
          Length = 642

 Score =  691 bits (1784), Expect = 0.0,   Method: Composition-based stats.
 Identities = 297/647 (45%), Positives = 428/647 (66%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP    +T PDGS ++F    +  +VA SI   LAK  +   +NG+  D  D +  + ++
Sbjct: 1   MPV---ITLPDGSQRSFDKPVSVYEVAASIGPGLAKATLGGRVNGQRVDAHDLISEDANL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            I TP+D   L +IRHSCAH++  A++ ++P+V++AIGP I++GFYYD D E   + +++
Sbjct: 58  VIFTPKDDDGLEIIRHSCAHLLGHAIKQLYPDVKMAIGPTIDNGFYYDVDLEHKLTDEDI 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE-SIPAKENVTLYRQGE 178
           A +E +M E+   +   +K+ +S ++A  +F ++ E+YK+EILE  IP  +   LY   E
Sbjct: 118 AALEARMLELAKTEYDVVKKKVSWQEAHAVFAARGESYKLEILERDIPQSDQPGLYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KLM+V+GAYWRGDSN  ML RIYGTA+   ++L  YL  L
Sbjct: 178 YIDMCRGPHVPNMRFCLNF-KLMRVSGAYWRGDSNNKMLQRIYGTAFADAKQLKAYLNLL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRKLA++ DLFH+ ++  G++FWH KGW ++Q +  YMR K  D  Y+E+ TP
Sbjct: 237 EEAAKRDHRKLAKKFDLFHLQDEAPGMVFWHPKGWTLWQQIEQYMRAKQNDWGYQEVRTP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW++SGHW++YR NMF       T  + R FA+KPMNCPGHV +FNHGL+S+++
Sbjct: 297 LIMDRVLWEKSGHWENYRENMFT------TESEKRDFAVKPMNCPGHVQIFNHGLRSHKD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+RLAEFGS +RNE SG+LHG+MRVRGF QDDAH+FCT++Q+  E    + ++ S+Y D
Sbjct: 351 LPLRLAEFGSCHRNEASGALHGIMRVRGFVQDDAHIFCTEDQVVAEVAAFNQMLKSVYDD 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF  I VKLS RPEK  GS   W+ AE  ++  L          +    L GEGAFYGP
Sbjct: 411 FGFTDIAVKLSLRPEKYAGSLETWNKAEEGLRTALRAAG------LEWEELPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K EY +KDA+GR WQCGTIQ+D+ LP R +A YV   + +  PVM+HRA+ GS ERF+GI
Sbjct: 465 KIEYQIKDALGRSWQCGTIQLDYVLPERLDAEYVADDNVRKRPVMLHRAILGSFERFLGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE+++G+ P+WLSP+Q +V  IT S  EY + +   L+   + +  D RNE I +KIRE
Sbjct: 525 LIEHYEGSFPVWLSPVQVVVANITDSQAEYVKRVEKALREQGIRVIADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H+I+++P +++ GDKE   +S+ +R         + L   I  LT +
Sbjct: 585 HTIQRVPYLLVVGDKEVENQSLAVRTRDGKDLGVMPLDAFIAHLTAD 631


>gi|194289383|ref|YP_002005290.1| threonyl-tRNA synthetase [Cupriavidus taiwanensis LMG 19424]
 gi|238692758|sp|B3R4J1|SYT_CUPTR RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|193223218|emb|CAQ69223.1| threonine tRNA synthetase [Cupriavidus taiwanensis LMG 19424]
          Length = 635

 Score =  691 bits (1784), Expect = 0.0,   Method: Composition-based stats.
 Identities = 319/641 (49%), Positives = 438/641 (68%), Gaps = 15/641 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            I +T PDGS + FP   T ++VA+SI   LAK A+A  ++G++ D S  +  +  + I+
Sbjct: 1   MIAITLPDGSRREFPGPVTVAEVAQSIGAGLAKAALAGKVDGQLVDTSYKIERDAELAIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   + VIRHS AH++A AV+ ++P+ QV IGP+IE+GFYYDF  ++PF+ ++LA I
Sbjct: 61  TDKDADGVDVIRHSTAHLLAYAVKELYPDAQVTIGPVIENGFYYDFAYKRPFTPEDLAAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EKKM E+  +D    ++  + ++A  LFES  E YK EI+ SIPA + + LYR+G + DL
Sbjct: 121 EKKMTELARKDEKVTREVWNRDEAVALFESMGEKYKAEIIGSIPADQEIGLYREGNFVDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG++K F KLMKVAGAYWRGD+N  ML RIYGTAW  +++   YL+ LEE+E
Sbjct: 181 CRGPHVPSTGKLKVF-KLMKVAGAYWRGDANNEMLQRIYGTAWAKKEDQEAYLHMLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLD 301
           KRDHRKL + +DLFH+ E+  G++FWH KGW+++Q +  YMR R     Y+E+ TPQV+D
Sbjct: 240 KRDHRKLGKTLDLFHLQEEAPGMVFWHPKGWQVWQAVEQYMRGRLTDAGYDEVRTPQVMD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW++SGHW +Y+ NMF       T  + R +A+KPMNCPGHV +FNHGL+SYR+LP+R
Sbjct: 300 RSLWEKSGHWQNYKENMFV------TESEKRDYAIKPMNCPGHVQIFNHGLRSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFG+ +RNEPSG+LHGLMRVRGF QDDAH+FCT+EQ+  E    + L  S+Y DFGF+
Sbjct: 354 LAEFGACHRNEPSGALHGLMRVRGFVQDDAHIFCTEEQIVAEAKAFNELAFSVYDDFGFK 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + VKLS RP++R GSD +WD AE  ++  L          +    L GEGAFYGPK EY
Sbjct: 414 DVKVKLSLRPDQRAGSDEIWDHAEEGLRLALRACG------VEWEELPGEGAFYGPKVEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDAIGR WQCGT+Q+D  LP R  A YV+  + +  PVM+HRA+ GS ERF+GI++EN
Sbjct: 468 HIKDAIGRSWQCGTLQLDLVLPERLGAEYVSEDNSRKRPVMLHRAILGSFERFLGILLEN 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G LP WL+P Q +V  I  S  EYA+ +  LL+      + D RNE I YKIREHS++
Sbjct: 528 HAGALPAWLAPDQVVVMNIADSQAEYAESVVQLLQKQGFRAKADLRNEKITYKIREHSLQ 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           K+P +++ GDKE     + +R  G+     + +   +  L 
Sbjct: 588 KVPYLLVVGDKERDANQVAVRARGNVDLGVMPVSAFVERLQ 628


>gi|294084802|ref|YP_003551562.1| threonyl-tRNA synthetase [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292664377|gb|ADE39478.1| Threonyl-tRNA synthetase [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 641

 Score =  691 bits (1783), Expect = 0.0,   Method: Composition-based stats.
 Identities = 332/653 (50%), Positives = 464/653 (71%), Gaps = 16/653 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP    +T PDGS+++F    T +DVA  I   LAK A+   ++G+  DL+  V  + ++
Sbjct: 1   MP---NITLPDGSVRSFDAPVTPADVAADIGPGLAKAALLAVVDGEEWDLTRAVDTDVNM 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            +IT +D  +LA++RH CAH+MAEAV  ++PE QV IGP IE+GFYYDF +E+ FS D+L
Sbjct: 58  ALITAKDDAALALLRHDCAHVMAEAVLELYPETQVTIGPAIENGFYYDFHREKAFSEDDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A IEK+M EI+ RD    +   + ++A   +E   E +KVE++ +IPA+E VT Y+QG +
Sbjct: 118 ALIEKRMHEIVDRDEAITRDVWTRDEAVAFYEKNNEPFKVELVAAIPAEETVTFYKQGNF 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPH+ STG++   FKLMKVAGAYWRGDS+RPML RIYGTAW T++EL  YL+ LE
Sbjct: 178 IDLCRGPHLPSTGKLGHAFKLMKVAGAYWRGDSDRPMLQRIYGTAWRTEKELNAYLHMLE 237

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+EKRDHRKL +++D+FH+ E+ +G +FWH+KGW I++ + SY+RR++ +  Y E+ TPQ
Sbjct: 238 EAEKRDHRKLGKQLDMFHLQEEAAGSVFWHQKGWFIYREIESYVRRRLEQAGYGEVKTPQ 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D+ LW++SGHWD +R NMF  +  D+     RT ALKPMNCP HV +F  G+KSYR+L
Sbjct: 298 LVDRTLWEESGHWDKFRENMFTAQSEDE-----RTLALKPMNCPCHVQIFRQGIKSYRDL 352

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFGS +RNEPSG+LHG+MRVR FTQDDAH+FCT++Q+  E ++   L+ SIY DF
Sbjct: 353 PLRMAEFGSCHRNEPSGALHGIMRVRAFTQDDAHIFCTEDQITEESVQFCALLQSIYADF 412

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF  + VK S RPE R G DA WD AE+ +       K      + T +  GEGAFYGPK
Sbjct: 413 GFTDVRVKFSDRPEVRAGDDATWDKAESALTDACSAAK------LETTLNPGEGAFYGPK 466

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E++L+DAIGRDWQCGT+QVDF LP R +A YV     +  PVM+HRA+ GS+ER+IGI+
Sbjct: 467 LEFVLRDAIGRDWQCGTLQVDFVLPERLDAEYVGEDGNRHRPVMLHRAILGSMERWIGIL 526

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE + G +P WL+P+Q +V +IT SA +YA+++A   ++  L +E DFRNE I+YK+REH
Sbjct: 527 IEQYSGRMPNWLAPVQIVVASITDSANDYAEQVARTAEAMGLRVERDFRNEKISYKVREH 586

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           S+ K+P I+  G +EA   ++ +RR GS     + + +A+ +L  ES+ PD +
Sbjct: 587 SVMKVPFILAVGGREAEAGTVALRRLGSNDQTVLDMKEALAMLRDESVAPDLK 639


>gi|302389962|ref|YP_003825783.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase
           [Thermosediminibacter oceani DSM 16646]
 gi|302200590|gb|ADL08160.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase
           [Thermosediminibacter oceani DSM 16646]
          Length = 637

 Score =  691 bits (1782), Expect = 0.0,   Method: Composition-based stats.
 Identities = 288/644 (44%), Positives = 427/644 (66%), Gaps = 16/644 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
           M   +K+       + +P   T  D+A+ +   LAK+A+   +NG + DL+  + E S +
Sbjct: 1   MQETVKVVLKGNEERVYPKGVTVMDIAQDLGPRLAKEALVAKVNGVIVDLNHRIEEDSSV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EI+T ED       RHS +H+MA+AV+ ++P V++AIGP IE+GFYYDFD+++ F+ ++L
Sbjct: 61  EILTFEDEEGKDAFRHSTSHVMAQAVKRLFPNVKLAIGPSIEEGFYYDFDRDESFTPEDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IEK+M++I+A D PF++  +S E+A ++ +   E YKVE++E++P    ++ Y+ GE+
Sbjct: 121 ERIEKEMEKIVAEDQPFIRMEVSREEAVKILKEMGEPYKVELVENLPDDAKISFYKNGEF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLC GPH+ STG++K F KL  +AGAYW+GDS   ML RIYGT++  +  L +YL  LE
Sbjct: 181 IDLCAGPHIPSTGRIKAF-KLTSLAGAYWKGDSRNKMLQRIYGTSFPKKSMLDEYLKKLE 239

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E++KRDHRKL +E+ LF + E+G G  F+H KG  ++ TLI + R++ +   Y+EI TP 
Sbjct: 240 EAKKRDHRKLGKELGLFSMHEEGPGFPFFHPKGMVLWNTLIDFWRKEHQKRGYQEIKTPI 299

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L++ LW++SGHWD Y+ NM+  +       D   +A+KPMNCPG + V+   + SYREL
Sbjct: 300 ILNEELWKRSGHWDHYKTNMYFTQI------DGEGYAIKPMNCPGGILVYKSDVHSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P++LAE G V+R+E SG LHGLMRVR FTQDDAH++    Q+  E L++ NL   IY+ F
Sbjct: 354 PLKLAELGLVHRHELSGVLHGLMRVRSFTQDDAHIYMMPSQIEQEILEVINLADHIYRIF 413

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+   V+LSTRPE  +G D LW+ A   +K  LD      +  +   +  G+GAFYGPK
Sbjct: 414 GFDYH-VELSTRPENSMGPDELWERATAALKNALD------KKGLPYRINEGDGAFYGPK 466

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++ LKD+IGR WQCGTIQ+DF +P RF+  Y+    EK  PVMIHR +FGS+ERFIGI+
Sbjct: 467 IDFHLKDSIGRTWQCGTIQLDFMMPERFDLTYIGPDGEKHRPVMIHRTIFGSLERFIGIL 526

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE++ G  P+WL+PIQ  V  I+   ++YA+++   L++  + +E D RNE I YKIRE 
Sbjct: 527 IEHYAGAFPVWLAPIQVKVLPISEKFMDYARKVTAELENSDIRVELDERNEKIGYKIREA 586

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            ++KIP ++I G+KEA+E ++ +R          SL D I  +T
Sbjct: 587 QLQKIPYMLIVGEKEAAEGTVSVRVREKGDVGMKSLKDFIEEVT 630


>gi|289163681|ref|YP_003453819.1| Threonyl tRNA synthetase [Legionella longbeachae NSW150]
 gi|288856854|emb|CBJ10665.1| Threonyl tRNA synthetase [Legionella longbeachae NSW150]
          Length = 639

 Score =  690 bits (1781), Expect = 0.0,   Method: Composition-based stats.
 Identities = 312/646 (48%), Positives = 433/646 (67%), Gaps = 18/646 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +  PDGS+K F    T  DVA SIS  LAK A+A  ++ ++ D S  +  + ++
Sbjct: 1   MP---NIKLPDGSVKQFEAPLTVYDVAHSISPGLAKAALAGRVDNRLVDTSYLIENDSAL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            I+T +   SL +IRHS AH++A+AV+SI+P  QV IGP++EDGFYYDF  ++ F+ D+L
Sbjct: 58  VILTEKQEESLEIIRHSTAHLLAQAVKSIFPSAQVTIGPVVEDGFYYDFAFQRAFTPDDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IE KM E+   + P  ++ L  ++A + F+S  E YK +I+  IP  E ++LY+QG++
Sbjct: 118 ELIEAKMAELAKANYPVTRRELPRDEAIQYFKSIGEEYKAKIIADIPKDEVLSLYKQGDF 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV +TG +K F KL K+AGAYWRGDSN  ML RIYGTAW  ++ L  YL+ LE
Sbjct: 178 EDLCRGPHVPATGFLKAF-KLTKLAGAYWRGDSNNEMLQRIYGTAWADKKALADYLFRLE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+EKRDHRKL + ++LFH  +   G++FWH KGW I+Q L  YMR ++ D  Y+EI TPQ
Sbjct: 237 EAEKRDHRKLGKSLELFHFQDIAPGMVFWHPKGWTIYQELERYMRHRLADFGYQEIRTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D+ LW++SGHW ++R  MF       T  + R +A+KPMNCP HV VFN GLKSYR+L
Sbjct: 297 LVDRVLWEKSGHWANFRDEMFV------TETENRHYAVKPMNCPCHVQVFNQGLKSYRDL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R +EFG+ +R EPSGSLHGLMRVR   QDDAH+FCT++Q+ +E   +  L+ S+Y DF
Sbjct: 351 PLRFSEFGNCHRCEPSGSLHGLMRVRNMVQDDAHIFCTEDQIQSEVAMMLELVQSVYTDF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF +I  +L+ RPEKRVGSD +WD AE  +K  +       +  I      GEGAFYGPK
Sbjct: 411 GFNEIKYRLALRPEKRVGSDEVWDKAEAALKQAMK------ERNIEWVDAPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E  L D +GR WQCGTIQVDF++P R +A Y+     K  PVM+HRA+ GS ERF+GI+
Sbjct: 465 IECSLSDCLGRIWQCGTIQVDFSMPGRLDAIYIAEDGSKQTPVMLHRAILGSFERFMGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE++ G LPLWLSP+QAI+ TI+    EYA+++  +L+ + +    D RNE I +KIREH
Sbjct: 525 IEHYAGKLPLWLSPVQAIIMTISEKQSEYAEKVTQILQKNGIRANFDLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +++KIP +++ GDKE     + +R    T    +++      L +E
Sbjct: 585 TLQKIPYLLVIGDKEVESGQVAVRTREGTDLGVMTIDTICDTLMQE 630


>gi|294789007|ref|ZP_06754247.1| threonine--tRNA ligase [Simonsiella muelleri ATCC 29453]
 gi|294483109|gb|EFG30796.1| threonine--tRNA ligase [Simonsiella muelleri ATCC 29453]
          Length = 638

 Score =  690 bits (1781), Expect = 0.0,   Method: Composition-based stats.
 Identities = 295/644 (45%), Positives = 433/644 (67%), Gaps = 17/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +T PDGS++ +    T   +A+SI   LAK  VA  +NG + D  DP+  + +++II
Sbjct: 1   MLNITLPDGSVRQYESPTTVMQIAQSIGAGLAKVTVAGKVNGVLRDACDPITEDATVQII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TP+D   + +IRHSCAH++  AV+ ++P  ++ IGP+I++GFYYD   E+PF+ +++A I
Sbjct: 61  TPKDQDGVEIIRHSCAHLVGHAVKQLFPNAKMVIGPVIDEGFYYDIATEKPFTPEDMAAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-ENVTLYRQGEWFD 181
           E++M+++I +D   +K+     +  E+F+++ E YK+ +++ +      + +Y   E+ D
Sbjct: 121 EERMKQLINQDYDVIKKMTPRAEVIEIFKNRGEEYKLRLIDDMADDITEMGMYFHQEYVD 180

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           +CRGPHV +T  +K F KL K++GAYWRGDSN   L RIYGTAW  + EL  Y+  +EE+
Sbjct: 181 MCRGPHVPNTRFLKHF-KLTKMSGAYWRGDSNNEQLQRIYGTAWANKDELKAYITRIEEA 239

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
           EKRDHRKL +++DLFH+ ++  G++FWH +GW ++Q +  +MR ++    Y+E+ TPQV+
Sbjct: 240 EKRDHRKLGKQLDLFHLQDEAPGMVFWHPRGWALWQVIEQHMRHELTAAGYQEVKTPQVM 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D+  W++SGHW +Y+ NMF       T  + R +A+KPMNCPGHV +FNH L+SYR+LP+
Sbjct: 300 DKTFWEKSGHWANYKDNMFL------TSSEKRDYAVKPMNCPGHVQIFNHALRSYRDLPM 353

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLAEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+  E  K + L++ IY+ FGF
Sbjct: 354 RLAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIAEETRKFNLLVMKIYQQFGF 413

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           E + +KLS RPEKR GSD +WD AE  ++  L          +    L GEGAFYGPK E
Sbjct: 414 ENVSIKLSLRPEKRAGSDEIWDKAEQGLRDALTACG------VEWEELPGEGAFYGPKVE 467

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           Y +KDA+GR WQCGTIQ+DF LP R +A YV   + K  PVM+HRA+ GS+ERFIGI+IE
Sbjct: 468 YHIKDALGRSWQCGTIQLDFVLPERLDAEYVTEDNNKARPVMLHRAILGSLERFIGILIE 527

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              G+ PLWL+P+Q +V  I+     YA E+   L++    ++ D RNE I YKIR++S 
Sbjct: 528 EHAGSFPLWLAPVQMVVMNISEGQAAYAAEVQAKLQAAGFRVDLDTRNEKIGYKIRDNST 587

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            + P  +  GDKE +   + IR+  +     VS+ + I +L KE
Sbjct: 588 MRYPYQLTVGDKEMANGQVSIRK-KAENLGSVSVNELIEMLKKE 630


>gi|99081562|ref|YP_613716.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Ruegeria sp.
           TM1040]
 gi|123077585|sp|Q1GFW2|SYT_SILST RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|99037842|gb|ABF64454.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Ruegeria sp.
           TM1040]
          Length = 648

 Score =  690 bits (1781), Expect = 0.0,   Method: Composition-based stats.
 Identities = 328/652 (50%), Positives = 443/652 (67%), Gaps = 10/652 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
           + I LTFPDG+ +++    T ++VA  IS SLAKKA++  ++G+  DL  PV ++ +I I
Sbjct: 2   AQISLTFPDGNARSYDAGITPAEVAADISTSLAKKAISATVDGQHWDLQWPVTQDAAIAI 61

Query: 62  ITPEDP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            T +D  ++  +IRH  AHIMA AVQ IWP+ +V IGP+IE+G+YYDFD+ +PF+ ++L 
Sbjct: 62  HTMKDEAQANELIRHDLAHIMARAVQEIWPDTKVTIGPVIENGWYYDFDRAEPFTPEDLG 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEKKM+EII +  P   +    EKA + +    E YKVE+++SIP  E + +Y  G+W 
Sbjct: 122 TIEKKMKEIINKREPVTTEVWEREKAIQYYTDNNEPYKVELIDSIPGDEPLRMYWHGDWQ 181

Query: 181 DLCRGPHVRSTGQ-VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           DLCRGPH++ TGQ     FKLM +AGAYWRGDS+R ML RIYG A+  +++L  +L  LE
Sbjct: 182 DLCRGPHLQHTGQVPGDAFKLMSIAGAYWRGDSDRQMLQRIYGVAFTGKEKLKAHLTMLE 241

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+ KRDHRKL REM+LFH+ E+  G +FWH  GW+I+ TL  YMRR + +D Y E+NTPQ
Sbjct: 242 EAAKRDHRKLGREMNLFHMQEEAPGQVFWHPNGWRIYTTLQDYMRRMQDRDGYVEVNTPQ 301

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHWD Y+ NMF V+  +D  ++    ALKPMNCP HV VFN GLKSYR+L
Sbjct: 302 VVDRKLWEKSGHWDKYQENMFIVEVDEDHAREKAVNALKPMNCPCHVQVFNQGLKSYRDL 361

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFGS  R EPSG+LHG+MRVRGFTQDD H+FCT++Q+ +E  K    +  +Y D 
Sbjct: 362 PLRMAEFGSCARYEPSGALHGIMRVRGFTQDDGHIFCTEDQITSETAKFIAFLSKVYADL 421

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+   +KLSTRPE+R+GSD  WD+ E  +               +  +L GEGAFYGPK
Sbjct: 422 GFDNWTIKLSTRPEQRIGSDETWDNMEQALGDACKAAGY------DYEILEGEGAFYGPK 475

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ L DAIGR+WQCGT+QVD NLP R  A ++     K  PVM+HRA  GS ERFIGI+
Sbjct: 476 LEFTLTDAIGRNWQCGTLQVDANLPERLEASFIGQDGSKHRPVMLHRATLGSFERFIGIL 535

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE   G LP WL+P Q +V +ITS A +Y  E+   L++  +  E D RNE INYK+REH
Sbjct: 536 IEEHAGKLPFWLAPRQVVVASITSEADDYVNEVVETLRAAGVRAEADTRNEKINYKVREH 595

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDC 650
           S+ K+P+I+  G +E  ER++ +RR G   T+  SL +    L K + PPD 
Sbjct: 596 SVGKVPVILAVGHREVEERTVSVRRLGEKQTKVESLTNVTEELAKAATPPDL 647


>gi|152988735|ref|YP_001347870.1| threonyl-tRNA synthetase [Pseudomonas aeruginosa PA7]
 gi|166225481|sp|A6V485|SYT_PSEA7 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|150963893|gb|ABR85918.1| threonyl-tRNA synthetase [Pseudomonas aeruginosa PA7]
          Length = 640

 Score =  690 bits (1781), Expect = 0.0,   Method: Composition-based stats.
 Identities = 286/639 (44%), Positives = 428/639 (66%), Gaps = 15/639 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS ++F    + ++VA+SI   LAK  +A  ++G++ D  D +  + +++IITP+
Sbjct: 4   ITLPDGSQRSFDHPVSVAEVAQSIGAGLAKATLAGKVDGRLVDACDTIERDATLQIITPK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A I+++
Sbjct: 64  DEEGLEIIRHSCAHLVGHAVKQLYPTAKMVIGPVIEEGFYYDIFFERPFTPEDMAAIQQR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+E+I +D   +K+     +  ELF+S+ E YK+ +++ +P ++ + LY   E+ D+CRG
Sbjct: 124 MRELIDKDYDVIKKMTPRAEVIELFKSRGEDYKLRLIDDMPDEKAMGLYFHEEYVDMCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +T  +K F    K++GAYWRGDS    L RIYGTAW  +++L  Y+  +EE+EKRD
Sbjct: 184 PHVPNTRFLKAFQLT-KISGAYWRGDSKNEQLQRIYGTAWADKKQLAAYIQRIEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHL 304
           HR++ +++DLFH+ E+  G++FWH  GW ++Q L  YMR+ +    Y E+ TPQV+D+ L
Sbjct: 243 HRRIGKQLDLFHLQEEAPGMVFWHPNGWSVYQVLEQYMRKVQRDHGYVEVRTPQVVDRIL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHW +Y  NMF       T  + R +A+KPMNCP HV +FN GLKSYR+LP+RLAE
Sbjct: 303 WERSGHWSNYAENMFT------TASESRDYAVKPMNCPCHVQIFNQGLKSYRDLPLRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FG+ +RNEPSG+LHG+MRVRGFTQDDAH+FCT+EQ+  E      L + +Y+DFGF  I 
Sbjct: 357 FGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEEQVKKEAADFIKLTLQVYRDFGFTDIA 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +KLSTRP KRVGSD LWD AE  +   L+      +  +      GEGAFYGPK E+ LK
Sbjct: 417 MKLSTRPAKRVGSDELWDRAEGALADALN------ESGLAWEYQPGEGAFYGPKIEFTLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D +GR+WQCGT+Q D NLP R +A Y+   + +  PVM+HRA+ GS ERFIG++IE++ G
Sbjct: 471 DCLGRNWQCGTLQYDPNLPERLDASYIAEDNNRKRPVMLHRAILGSFERFIGMLIEHYAG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P WL+P QA+V  IT    ++A E+  +L       ++D RNE I +KIREH++ K+P
Sbjct: 531 AFPAWLAPTQAVVMNITDKQADFAAEVVRILGESGFRAKSDLRNEKIGFKIREHTLLKVP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +++ GD+E   +++ +R         + +     +L +
Sbjct: 591 YLLVIGDREVESKAVAVRTREGEDLGSMPVTQFAELLAQ 629


>gi|119897370|ref|YP_932583.1| threonyl-tRNA synthetase [Azoarcus sp. BH72]
 gi|166223320|sp|A1K4E1|SYT_AZOSB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|119669783|emb|CAL93696.1| ThrS protein [Azoarcus sp. BH72]
          Length = 638

 Score =  690 bits (1781), Expect = 0.0,   Method: Composition-based stats.
 Identities = 317/642 (49%), Positives = 430/642 (66%), Gaps = 18/642 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +  PDGS+++F    T ++VA SI   LAK A+A  ++GK  DLS  +  +  +
Sbjct: 1   MP---NIKLPDGSVRSFDHPVTVAEVAASIGSGLAKAALAGRVDGKAVDLSYCIERDSEL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            I+T +    + VIRHS AH++A AV+ ++PE QV IGP+IE+GFYYDF  ++PF+ ++L
Sbjct: 58  AILTDKSAEGVDVIRHSTAHLLAHAVKELFPEAQVTIGPVIENGFYYDFSYKRPFTPEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEK+M E++ R+ P  ++    +KA   F+S  E YK EI+ SIPA E+V+LYRQGE+
Sbjct: 118 EAIEKRMAELVKRELPVEREVWPRDKAVAFFKSIGEHYKAEIIASIPANEDVSLYRQGEF 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV STG++K F KL K+AGAYWRGD+   ML R+YGTAW  +++L  YL+ LE
Sbjct: 178 VDLCRGPHVPSTGRLKVF-KLTKLAGAYWRGDAKNEMLQRVYGTAWAKKEDLESYLHMLE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+EKRDHRKL R++DLFHI E+  G++FWH KGW ++Q +  Y+R  I    Y+E+ TPQ
Sbjct: 237 EAEKRDHRKLGRQLDLFHIQEEAPGMVFWHAKGWTLWQQVEQYLRGTISRHGYQEVRTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D+ LW++SGHW  Y   MF       T  +   +A+KPMNCP H+ +FN GLKSYR+L
Sbjct: 297 IVDRSLWEKSGHWGMYSDLMFT------TQSEKHDYAVKPMNCPCHIQIFNQGLKSYRDL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFGS +RNEPSGSLHG+MRVR F QDDAH+FCT EQ+  E      L+  +Y DF
Sbjct: 351 PLRMAEFGSCHRNEPSGSLHGIMRVRNFVQDDAHIFCTDEQVQEEAAAFIALLQKVYADF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF  I +KLSTRPEKRVG+D  WD AE                 +   +  GEGAFYGPK
Sbjct: 411 GFRDIQIKLSTRPEKRVGADEQWDAAEAA------LAAALKAQGLEYELQPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD + R WQCGT+Q+DFNLP R  A YV   + K  PVM+HRA+ GS+ERFIGI+
Sbjct: 465 IEFSLKDCLNRVWQCGTLQLDFNLPVRLGAEYVAEDNTKKFPVMLHRAIVGSLERFIGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE++ G +PLWL+P+ A+V  I+    +YA E+ N L+     +E D RNE INYKIREH
Sbjct: 525 IEHYAGAMPLWLAPVHAVVMNISEGQADYATEVVNRLREAGFRVEADLRNEKINYKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
           S+ K+P  ++ G+KE +   + +R  G     ++SL   I  
Sbjct: 585 SVHKLPYQLVVGEKEKAAGVVAVRVRGGQDLGQLSLDKLIER 626


>gi|303257521|ref|ZP_07343533.1| threonine--tRNA ligase [Burkholderiales bacterium 1_1_47]
 gi|331000214|ref|ZP_08323898.1| threonine--tRNA ligase [Parasutterella excrementihominis YIT 11859]
 gi|302859491|gb|EFL82570.1| threonine--tRNA ligase [Burkholderiales bacterium 1_1_47]
 gi|329572380|gb|EGG54033.1| threonine--tRNA ligase [Parasutterella excrementihominis YIT 11859]
          Length = 641

 Score =  690 bits (1781), Expect = 0.0,   Method: Composition-based stats.
 Identities = 322/643 (50%), Positives = 446/643 (69%), Gaps = 15/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEII 62
            I++T PDGS + F    T  DVA SI   LA+ A+A  +NGK+ DLS P+ E S + I+
Sbjct: 1   MIEVTLPDGSKREFDSPVTVGDVAASIGAGLARAALAGKVNGKLVDLSHPITENSTVSIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +DP  L +IRHS +H+MA+AV+ ++PE Q+ IGP+IE+GFYYDF   +  ++++L  I
Sbjct: 61  TDKDPEGLEIIRHSTSHLMAQAVKELYPEAQITIGPVIENGFYYDFSLPKHLTNEDLPLI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EKKM EI+ RD P +++ +  ++A + F S  E YK EI+ SIPA E ++LYRQG++ DL
Sbjct: 121 EKKMDEIVKRDLPIVREEMDRDEAVKYFNSIGEHYKAEIIGSIPAGETISLYRQGDYVDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG++K   KLMK+AGAYWRGDS   ML RIYGTAW  + ++  YL+ LEE+E
Sbjct: 181 CRGPHVPSTGRLKVH-KLMKLAGAYWRGDSKNEMLQRIYGTAWAKKDDMAAYLHMLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD 301
           KRDHR+L +E+DLFH  E+  G+IFWH +GW ++Q +  YMRR  + +DY+E+  PQ+LD
Sbjct: 240 KRDHRRLGKELDLFHFQEEAPGLIFWHARGWALWQQVEQYMRRVYQDNDYQEVKAPQLLD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW++SGHW  Y+ NMF       T  + R +ALKPMNCPGH+ +FN  ++SYR+LP+R
Sbjct: 300 RSLWEKSGHWSKYKENMFT------TESENRYYALKPMNCPGHIQIFNSAVRSYRDLPIR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
             EFG+ +RNEPSGSLHGLMRVRGFTQDD H+FCT++Q+ +EC     L+  +Y D+GF 
Sbjct: 354 YGEFGACHRNEPSGSLHGLMRVRGFTQDDGHIFCTEDQILSECTAYTKLVQKVYADYGFT 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            I  K++TRPEKR+G DA WD AE  +   LD         I   +L GEGAFYGPK EY
Sbjct: 414 DISYKIATRPEKRIGDDATWDKAEKALMDALDASG------IKYDILPGEGAFYGPKIEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L+D++GR WQCGTIQVDF +P+R  A YV   + +  PVM+HRA+ GS+ERFIG+++E+
Sbjct: 468 HLRDSLGRGWQCGTIQVDFQMPARLGAEYVTESNGRATPVMLHRAIVGSLERFIGMLLEH 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G LP WL+P+Q  V  IT    +YA+E+ ++LK   L  E D RN  I YKIRE S++
Sbjct: 528 YAGQLPPWLAPVQVAVANITDDQADYAKEVVSMLKKAGLRAEADLRNGKITYKIRELSLQ 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K+P I++ G KE +E  + +R  G      +S+ D I ++ ++
Sbjct: 588 KLPYILVVGAKEKAEGKVAVRVRGGKDLGAMSVEDFIKLVQED 630


>gi|254498720|ref|ZP_05111436.1| threonyl tRNA synthase [Legionella drancourtii LLAP12]
 gi|254352048|gb|EET10867.1| threonyl tRNA synthase [Legionella drancourtii LLAP12]
          Length = 648

 Score =  690 bits (1781), Expect = 0.0,   Method: Composition-based stats.
 Identities = 314/646 (48%), Positives = 433/646 (67%), Gaps = 18/646 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +  PDGS+K+F    T  DVA +IS  LAK A+A  ++G++ D S  +  + S+
Sbjct: 10  MP---NIKLPDGSVKHFEAPLTVYDVAHNISPGLAKAALAGRVDGRLVDTSYLMEHDCSL 66

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +   SL VIRHS AH++A+AV+S++P  QV IGP+IEDGFYYDF  ++PF+ ++L
Sbjct: 67  VIITEKQEESLEVIRHSTAHLLAQAVKSLFPSAQVTIGPVIEDGFYYDFSFQRPFTPEDL 126

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            QIE KM E+   + P  ++ L  ++A   F+   E YK +I+  IPA E ++LY+QG++
Sbjct: 127 EQIEAKMMELAKANYPITRRELPRDEAINYFKDIGEEYKAKIIADIPATEVLSLYKQGDF 186

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV +TG +K F KL K+AGAYWRGDSN  ML RIYGTAW  ++ L  YL+ +E
Sbjct: 187 EDLCRGPHVPATGFLKAF-KLTKLAGAYWRGDSNNEMLQRIYGTAWADKKSLADYLFRIE 245

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+EKRDHRKL + ++LFH  +   G++FWH KGW I+Q L  YMR ++ D  Y+EI TPQ
Sbjct: 246 EAEKRDHRKLGKTLELFHFQDIAPGMVFWHPKGWTIYQELERYMRARLADFGYQEIKTPQ 305

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D+ LW++SGHW ++R  MF       T  D R +A+KPMNCP H+ V+N GLKSYR+L
Sbjct: 306 LVDKVLWEKSGHWANFRDEMFV------TETDNRHYAVKPMNCPCHIQVYNQGLKSYRDL 359

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R +EFG+ +R EPSGSLHGLMRVR   QDDAH+FCT++Q+ +E   +  L+ S+Y DF
Sbjct: 360 PLRFSEFGNCHRCEPSGSLHGLMRVRNMVQDDAHIFCTEDQIQSEVDMMLQLVQSVYTDF 419

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF +I  +L+ RPEKRVG D +WD AE  +K  +          I      GEGAFYGPK
Sbjct: 420 GFNEIKYRLALRPEKRVGGDDVWDKAEAALKQAMKD------RTIEWVDAPGEGAFYGPK 473

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E  L D +GR WQCGTIQVDF++P R +A Y+     K  PVM+HRA+ GS ERF+GI+
Sbjct: 474 IECSLSDCLGRIWQCGTIQVDFSMPGRLDASYIAEDGSKQIPVMLHRAILGSFERFMGIL 533

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE++ G LPLWLSP+QA V TI+    +YAQ++  +L+   L    D RNE I +KIREH
Sbjct: 534 IEHYAGKLPLWLSPVQAAVLTISEKQNDYAQQVTQILQKRGLRANFDLRNEKIGFKIREH 593

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +++K+P +++ GDKE     + +R    T    +++      LT+E
Sbjct: 594 TLQKVPYLLVIGDKEVESGQVAVRSREGTDLGVMTIDTVCDTLTQE 639


>gi|93007241|ref|YP_581678.1| threonyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
 gi|123264359|sp|Q1Q809|SYT_PSYCK RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|92394919|gb|ABE76194.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Psychrobacter
           cryohalolentis K5]
          Length = 644

 Score =  690 bits (1780), Expect = 0.0,   Method: Composition-based stats.
 Identities = 307/640 (47%), Positives = 437/640 (68%), Gaps = 15/640 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +T PDGS+KNF  + T  +VA+SI   LAK  VA  ++G++ D  DP+  +  +EI+
Sbjct: 1   MVAITLPDGSVKNFEGNTTVMEVAQSIGTGLAKATVAGRVDGQLVDAHDPIAHDAKVEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TP+D   + +IRHSCAH++  AV+ ++P+V++ IGP+I+DGFYYD   E PF+ + +A I
Sbjct: 61  TPKDDDGVDIIRHSCAHLLGHAVKQLYPDVKMVIGPVIDDGFYYDIYSETPFTPEHMAAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M E+I +D   +K+     +   +FE + E YK++++  +P +E   LY   E+ D+
Sbjct: 121 EKRMMELIKQDYDVIKKITPRAEVIRIFEERGEEYKLKLINDMPGEEAFGLYHHQEYVDM 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +T  +K F KL K++GAYWRGD+    L RIYGTAW  +++L  Y+  +EE+E
Sbjct: 181 CRGPHVPNTRFLKVF-KLTKMSGAYWRGDAKNEQLQRIYGTAWADKKDLKAYIQRIEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KRDHRK+ + ++LFH+ E   G++FWH  GW I+Q L  YMR+ +  + YEEI TPQ++D
Sbjct: 240 KRDHRKIGKALNLFHMQEQAPGMVFWHANGWTIYQVLEQYMRKVQHDNGYEEIKTPQIVD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW++SGHW +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYR+LP+R
Sbjct: 300 RSLWERSGHWGNYATNMFT------TSSENRDYAVKPMNCPCHVQVFNQGLKSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AEFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+ Q+  E      L +++Y+DFGF+
Sbjct: 354 MAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTQSQIQQEVADFIKLTLAVYEDFGFD 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
           KI++KLSTRPEKRVGSD  WD AE  +   LD+        ++   L GEGAFYGPK E+
Sbjct: 414 KIIMKLSTRPEKRVGSDESWDFAEKALADALDSSG------LDWAYLPGEGAFYGPKIEF 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            LKD++GR WQCGTIQVD N+P R +A +VN  +E+  P+M+HRA+ GS ERFIGI+IEN
Sbjct: 468 SLKDSLGRVWQCGTIQVDPNMPERLDAEFVNEQNEREVPIMLHRAILGSFERFIGILIEN 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G +P+WL+P Q +V  IT    +  + + N LK   L   +D RNE I +KIRE +++
Sbjct: 528 YAGWMPVWLAPQQVVVMNITDKQADACENVVNELKKAGLRAISDLRNEKIGFKIREKTLE 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           +IP +++ GDKE    SI +R         +S+ + I ++
Sbjct: 588 RIPYMLVLGDKEVESGSINVRTREGENLGVMSVAEFITLV 627


>gi|15597940|ref|NP_251434.1| threonyl-tRNA synthetase [Pseudomonas aeruginosa PAO1]
 gi|116050734|ref|YP_790445.1| threonyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218891076|ref|YP_002439942.1| threonyl-tRNA synthetase [Pseudomonas aeruginosa LESB58]
 gi|254241197|ref|ZP_04934519.1| threonyl-tRNA synthetase [Pseudomonas aeruginosa 2192]
 gi|313107813|ref|ZP_07793987.1| threonyl-tRNA synthetase [Pseudomonas aeruginosa 39016]
 gi|22654141|sp|Q9I099|SYT_PSEAE RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|122259859|sp|Q02NP1|SYT_PSEAB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|226701406|sp|B7V188|SYT_PSEA8 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|9948822|gb|AAG06132.1|AE004702_9 threonyl-tRNA synthetase [Pseudomonas aeruginosa PAO1]
 gi|115585955|gb|ABJ11970.1| threonyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126194575|gb|EAZ58638.1| threonyl-tRNA synthetase [Pseudomonas aeruginosa 2192]
 gi|218771301|emb|CAW27066.1| threonyl-tRNA synthetase [Pseudomonas aeruginosa LESB58]
 gi|310880489|gb|EFQ39083.1| threonyl-tRNA synthetase [Pseudomonas aeruginosa 39016]
          Length = 640

 Score =  690 bits (1780), Expect = 0.0,   Method: Composition-based stats.
 Identities = 287/639 (44%), Positives = 429/639 (67%), Gaps = 15/639 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS ++F    + ++VA+SI   LAK  +A  ++G++ D  D + R+ +++IITP+
Sbjct: 4   ITLPDGSQRSFDHPVSVAEVAQSIGAGLAKATLAGKVDGRLVDACDTIDRDATLQIITPK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A I+++
Sbjct: 64  DEEGLEIIRHSCAHLVGHAVKQLYPTAKMVIGPVIEEGFYYDIFFERPFTPEDMAAIQQR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+E+I +D   +K+     +  ELF+S+ E YK+ +++ +P ++ + LY   E+ D+CRG
Sbjct: 124 MRELIDKDYDVIKKMTPRAEVIELFKSRGEDYKLRLIDDMPDEKAMGLYFHEEYVDMCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +T  +K F    K++GAYWRGDS    L RIYGTAW  +++L  Y+  +EE+EKRD
Sbjct: 184 PHVPNTRFLKAFQLT-KISGAYWRGDSKNEQLQRIYGTAWADKKQLAAYIQRIEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHL 304
           HR++ +++DLFH+ E+  G++FWH  GW ++Q L  YMR+ +    Y E+ TPQV+D+ L
Sbjct: 243 HRRIGKQLDLFHLQEEAPGMVFWHPNGWSVYQVLEQYMRKVQRDHGYVEVRTPQVVDRIL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHW +Y  NMF       T  + R +A+KPMNCP HV +FN GLKSYR+LP+RLAE
Sbjct: 303 WERSGHWSNYAENMFT------TSSESRDYAVKPMNCPCHVQIFNQGLKSYRDLPLRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FG+ +RNEPSG+LHG+MRVRGFTQDDAH+FCT+EQ+  E      L + +Y+DFGF  I 
Sbjct: 357 FGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEEQVKKEAADFIKLTLQVYRDFGFTDIA 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +KLSTRP KRVGSD LWD AE  +   L+      +  +      GEGAFYGPK E+ LK
Sbjct: 417 MKLSTRPAKRVGSDELWDRAEGALADALN------ESGLAWEYQPGEGAFYGPKIEFTLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D +GR+WQCGT+Q D NLP R +A Y+   + +  PVM+HRA+ GS ERFIG++IE++ G
Sbjct: 471 DCLGRNWQCGTLQYDPNLPERLDASYIAEDNNRKRPVMLHRAILGSFERFIGMLIEHYAG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P WL+P QA+V  IT    ++A E+  +L       ++D RNE I +KIREH++ K+P
Sbjct: 531 AFPAWLAPTQAVVMNITDKQADFAAEVVRILGESGFRAKSDLRNEKIGFKIREHTLLKVP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +++ GD+E   +++ +R         + +     +L +
Sbjct: 591 YLLVIGDREVESKAVAVRTREGEDLGSMPVTQFAELLAQ 629


>gi|28869575|ref|NP_792194.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|213970495|ref|ZP_03398622.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. tomato T1]
 gi|301384174|ref|ZP_07232592.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. tomato Max13]
 gi|302132643|ref|ZP_07258633.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. tomato NCPPB
           1108]
 gi|38258312|sp|Q883H9|SYT_PSESM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|28852817|gb|AAO55889.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|213924666|gb|EEB58234.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. tomato T1]
 gi|330876789|gb|EGH10938.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. morsprunorum
           str. M302280PT]
 gi|331016139|gb|EGH96195.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str.
           M302278PT]
          Length = 640

 Score =  690 bits (1780), Expect = 0.0,   Method: Composition-based stats.
 Identities = 301/645 (46%), Positives = 435/645 (67%), Gaps = 18/645 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS ++F    + +DVA SI   LAK  VA  ++GK+ D  D +  + S+
Sbjct: 1   MP---TITLPDGSQRSFDHAVSVADVALSIGAGLAKATVAGKVDGKLVDACDLIENDASL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           +IITP+D   L +IRHSCAH++  AV+ ++P  ++ IGP+I+DGFYYD   E+PF+ D+L
Sbjct: 58  QIITPKDAEGLEIIRHSCAHLVGHAVKQLYPTAKMVIGPVIDDGFYYDIAYERPFTPDDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A IE++MQ++I +D   +K+     +  E+F ++ E YK+ ++E +P ++ + LY   E+
Sbjct: 118 AAIEQRMQQLIEKDYDVIKKVTPRAEVIEVFTARHEDYKLRLVEGMPDEQAMGLYYHEEY 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            D+CRGPHV +T  +K F KL K++GAYWRGD+    L R+YGTAW  +++L  Y+  +E
Sbjct: 178 VDMCRGPHVPNTRFLKSF-KLTKLSGAYWRGDAKNEQLQRVYGTAWADKKQLAAYIQRIE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+EKRDHRK+ + + LFH  E+  G++FWH +GW ++Q L  YMR+ + ++ Y EI TPQ
Sbjct: 237 EAEKRDHRKIGKRLGLFHTQEEAPGMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHW +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYREL
Sbjct: 297 VVDRSLWEKSGHWANYADNMFT------TQSESRDYAIKPMNCPCHVQVFNQGLKSYREL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFG+ +RNEPSG+LHG+MRVRGFTQDDAH+FCT++QM  E      L + +Y DF
Sbjct: 351 PLRLAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEDQMQAESAAFIKLTLDVYADF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+ I +KLSTRPEKRVGSD LWD AE+ +   LD+        +   +  GEGAFYGPK
Sbjct: 411 GFKDIELKLSTRPEKRVGSDELWDRAESALASALDSAG------LPYDLQPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD +GR WQCGT+Q+DFNLP R +A YV+  + + +PVM+HRA+ GS ERFIGI+
Sbjct: 465 IEFSLKDCLGRVWQCGTLQLDFNLPIRLSAEYVSEDNSRKNPVMLHRAILGSFERFIGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+++G  P WL+P QA++  IT    ++A E+   L       ++D RNE I +KIREH
Sbjct: 525 IEHYEGAFPAWLAPTQAVIMNITDKQADFALEVEKTLAESGFRAKSDLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           ++ K+P +++ GD+E   +++ +R         + +      L +
Sbjct: 585 TLLKVPYLLVIGDREVEMQTVAVRTREGADLGSMPVAQFAEFLAQ 629


>gi|270158051|ref|ZP_06186708.1| threonyl-tRNA synthetase [Legionella longbeachae D-4968]
 gi|269990076|gb|EEZ96330.1| threonyl-tRNA synthetase [Legionella longbeachae D-4968]
          Length = 639

 Score =  689 bits (1779), Expect = 0.0,   Method: Composition-based stats.
 Identities = 312/646 (48%), Positives = 433/646 (67%), Gaps = 18/646 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +  PDGS+K F    T  DVA SIS  LAK A+A  ++ ++ D S  +  + ++
Sbjct: 1   MP---NIKLPDGSVKQFEAPLTVYDVAHSISPGLAKAALAGRVDNRLVDTSYLIENDSAL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            I+T +   SL +IRHS AH++A+AV+SI+P  QV IGP++EDGFYYDF  ++ F+ D+L
Sbjct: 58  VILTEKQEESLEIIRHSTAHLLAQAVKSIFPSAQVTIGPVVEDGFYYDFAFQRAFTPDDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IE KM E+   + P  ++ L  ++A + F+S  E YK +I+  IP  E ++LY+QG++
Sbjct: 118 ELIEAKMAELAKANYPVTRRELPRDEAIQYFKSIGEEYKAKIIADIPKDEVLSLYKQGDF 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV +TG +K F KL K+AGAYWRGDSN  ML RIYGTAW  ++ L  YL+ LE
Sbjct: 178 EDLCRGPHVPATGFLKAF-KLTKLAGAYWRGDSNNEMLQRIYGTAWADKKALADYLFRLE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+EKRDHRKL + ++LFH  +   G++FWH KGW I+Q L  YMR ++ D  Y+EI TPQ
Sbjct: 237 EAEKRDHRKLGKSLELFHFQDIAPGMVFWHPKGWTIYQELERYMRHRLADFGYQEIRTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D+ LW++SGHW ++R  MF       T  + R +A+KPMNCP HV VFN GLKSYR+L
Sbjct: 297 LVDRVLWEKSGHWANFRDEMFV------TETENRHYAVKPMNCPCHVQVFNQGLKSYRDL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R +EFG+ +R EPSGSLHGLMRVR   QDDAH+FCT++Q+ +E   +  L+ S+Y DF
Sbjct: 351 PLRFSEFGNCHRCEPSGSLHGLMRVRNMVQDDAHIFCTEDQIQSEVAMMLELVQSVYTDF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF +I  +L+ RPEKRVGSD +WD AE  +K  +       +  I      GEGAFYGPK
Sbjct: 411 GFNEIKYRLALRPEKRVGSDEVWDKAEAALKQAMK------ERNIEWVDAPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E  L D +GR WQCGTIQVDF++P R +A Y+     K  PVM+HRA+ GS ERF+GI+
Sbjct: 465 IECSLSDCLGRIWQCGTIQVDFSMPGRLDAIYIAEDGSKQTPVMLHRAILGSFERFMGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE++ G LPLWLSP+QAI+ TI+    EYA+++  +L+ + +    D RNE I +KIREH
Sbjct: 525 IEHYAGKLPLWLSPVQAIIMTISEKQSEYAEKVTQILQKNGIRANFDLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +++KIP +++ GDKE     + +R    T    +++      L +E
Sbjct: 585 TLQKIPYLLVIGDKEVESGQVAVRTREGTDLGLMTIDTICDTLMQE 630


>gi|296388793|ref|ZP_06878268.1| threonyl-tRNA synthetase [Pseudomonas aeruginosa PAb1]
          Length = 640

 Score =  689 bits (1779), Expect = 0.0,   Method: Composition-based stats.
 Identities = 287/639 (44%), Positives = 429/639 (67%), Gaps = 15/639 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS ++F    + ++VA+SI   LAK  +A  ++G++ D  D + R+ +++IITP+
Sbjct: 4   ITLPDGSQRSFDHPVSVAEVAQSIGAGLAKATLAGKVDGRLVDACDTIDRDATLQIITPK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A I+++
Sbjct: 64  DEEGLEIIRHSCAHLVGHAVKQLYPTAKMVIGPVIEEGFYYDIFFERPFTPEDMAAIQQR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+E+I +D   +K+     +  ELF+S+ E YK+ +++ +P ++ + LY   E+ D+CRG
Sbjct: 124 MRELIDKDYDVIKKMTPRAEVIELFKSRGEDYKLRLIDDMPDEKAMGLYFHEEYVDMCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +T  +K F    K++GAYWRGDS    L RIYGTAW  +++L  Y+  +EE+EKRD
Sbjct: 184 PHVPNTRFLKAFQLT-KISGAYWRGDSKNEQLQRIYGTAWADKKQLAAYIQRIEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHL 304
           HR++ +++DLFH+ E+  G++FWH  GW ++Q L  YMR+ +    Y E+ TPQV+D+ L
Sbjct: 243 HRRIGKQLDLFHLQEEAPGMVFWHPNGWSVYQVLEQYMRKVQRDHGYVEVRTPQVVDRIL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHW +Y  NMF       T  + R +A+KPMNCP HV +FN GLKSYR+LP+RLAE
Sbjct: 303 WERSGHWSNYAENMFT------TSSESRDYAVKPMNCPCHVQIFNQGLKSYRDLPLRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FG+ +RNEPSG+LHG+MRVRGFTQDDAH+FCT+EQ+  E      L + +Y+DFGF  I 
Sbjct: 357 FGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEEQVKKEAADFIKLTLQVYRDFGFTDIA 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +KLSTRP KRVGSD LWD AE  +   L+      +  +      GEGAFYGPK E+ LK
Sbjct: 417 MKLSTRPAKRVGSDELWDRAEGALADALN------ESGLAWEYQPGEGAFYGPKIEFTLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D +GR+WQCGT+Q D NLP R +A Y+   + +  PVM+HRA+ GS ERFIG++IE++ G
Sbjct: 471 DCLGRNWQCGTLQYDPNLPERLDASYIAEDNNRKRPVMLHRAILGSFERFIGMLIEHYAG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P WL+P QA+V  IT    ++A E+  +L       ++D RNE I +KIREH++ K+P
Sbjct: 531 AFPAWLAPTQAVVMNITDKQADFAAEVVRMLGESGFRAKSDLRNEKIGFKIREHTLLKVP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +++ GD+E   +++ +R         + +     +L +
Sbjct: 591 YLLVIGDREVESKAVAVRTREGEDLGSMPVTQFAELLAQ 629


>gi|289208097|ref|YP_003460163.1| threonyl-tRNA synthetase [Thioalkalivibrio sp. K90mix]
 gi|288943728|gb|ADC71427.1| threonyl-tRNA synthetase [Thioalkalivibrio sp. K90mix]
          Length = 638

 Score =  689 bits (1779), Expect = 0.0,   Method: Composition-based stats.
 Identities = 287/647 (44%), Positives = 420/647 (64%), Gaps = 18/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP+   +T PDGS + F    T  DVA+ I   LAK  +A  +NG++ D    +  +  +
Sbjct: 1   MPA---VTLPDGSRREFDHPVTVLDVAKDIGPGLAKATLAGKVNGQLVDARHEIDADAEL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            I+T  DP  + +IRHS AH+MA+AV+ ++PE QV IGP IE+GFYYDF  ++ F+ ++L
Sbjct: 58  AIVTDRDPEGVEIIRHSTAHLMAQAVKQLFPEAQVTIGPTIENGFYYDFAYDRGFTPEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IEK+M+E+  +D P  +  +  ++A + F    E YK EI+ SIP  EN++LY+QG++
Sbjct: 118 EKIEKRMKELAKQDLPVERSLMDRDEAVKYFRDMGEEYKAEIIASIPQGENISLYKQGDF 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPH+ STG++K F KL KVAGAYWRGDS+  ML RIYGTAW  + +L +YL  L+
Sbjct: 178 VDLCRGPHIPSTGKLKAF-KLTKVAGAYWRGDSDNEMLQRIYGTAWANKDQLKEYLERLK 236

Query: 240 ESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTP 297
           E+E+RDHRK+ +E+DLF I ++ G G++FWH KG +I + +  Y      K  Y+ + +P
Sbjct: 237 EAERRDHRKIGQELDLFSIQDEAGGGLVFWHPKGARIRREIEKYWYDMHEKAGYDFVVSP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  LW+ SGH D Y  +M+     +      + F LKPMNCP HV ++   L SYR+
Sbjct: 297 HIANLELWKTSGHADFYAESMYEPMEDEH-----QAFQLKPMNCPFHVLMYKDRLHSYRD 351

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R AE G+VYR E SG+LHGLMRVRGFTQDDAH+FC ++Q+  E + + +L + + + 
Sbjct: 352 LPLRWAEMGTVYRREMSGALHGLMRVRGFTQDDAHIFCREDQIEAEVMAVIDLTLEVLQT 411

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEK  V LST+PE  VGSD +W+ A   ++  ++      +  +   V  G GAFYGP
Sbjct: 412 FGFEKFDVNLSTKPEDAVGSDEIWEHATASLRSAIE------KKGLEYSVDEGGGAFYGP 465

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  + DAIGR+WQC T+Q+DFNLP RF+  YV   +E+  P+MIHRA+ GS+ERF G+
Sbjct: 466 KIDIKIHDAIGREWQCSTVQLDFNLPERFDMEYVAEDNERRRPIMIHRALLGSVERFFGV 525

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE++ G+ P WL+P+QA V TIT    +YA+E+   L+     +E+D RNE I +KIRE
Sbjct: 526 LIEHYAGHFPTWLAPVQAEVLTITERQDDYAREVTRALRDKGFRVESDLRNEKIGFKIRE 585

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H++K++P +++ GDKE     + +R         +S+      L +E
Sbjct: 586 HTLKRVPYLLVLGDKEMENGQVAVRTRSGEDLGVMSVEAFGERLREE 632


>gi|332290253|ref|YP_004421105.1| threonyl-tRNA synthetase [Gallibacterium anatis UMN179]
 gi|330433149|gb|AEC18208.1| threonyl-tRNA synthetase [Gallibacterium anatis UMN179]
          Length = 643

 Score =  689 bits (1779), Expect = 0.0,   Method: Composition-based stats.
 Identities = 304/648 (46%), Positives = 427/648 (65%), Gaps = 16/648 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS + F    T  +VA+SI   LAK  +A  +NG   D  D +  + ++EIIT +
Sbjct: 4   ITLPDGSQRQFEQPVTVLEVAQSIGAGLAKACIAGRVNGVRKDACDLINEDANVEIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ ++P  ++AIGP IE+GFYYD D +   ++++L +IEK+
Sbjct: 64  DEDGLEIIRHSCAHLLGHALKQLYPNAKMAIGPTIENGFYYDIDLDHSLTAEDLEKIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES-IPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K+ +S +KA ++FE + E YK+ ILE  I       LY   E+ D+CR
Sbjct: 124 MLELAKTNYDVIKEPVSWQKAHDVFEQRGEPYKMAILEENIEKTATPALYHHLEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +      F KL KVAGAYWRGDSN  ML RIYGTAW  +++L +YL  LEE+ KR
Sbjct: 184 GPHVPNMRFCHHF-KLQKVAGAYWRGDSNNKMLQRIYGTAWADKKQLAEYLKRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQH 303
           DHRK+ + +DL+H+ E+  G++FWH  GW IF+ L +++R K+ + DY+E+  P ++D+ 
Sbjct: 243 DHRKIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRAKLKQYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW +Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWQNYGDLMFT------TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+ Q+ +E      ++  IY  FGF  I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTENQIESEVTSCIKMVYDIYSTFGFTDI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPE R+GSD +WD AE  +   L+       + +   V  GEGAFYGPK E+ L
Sbjct: 417 YVKLSTRPEHRIGSDEMWDRAEADLAKALEH------NGLEYEVQPGEGAFYGPKLEFAL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D+IGR+WQCGT+Q+DF LP R NA YV   +E+  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 RDSIGREWQCGTVQLDFALPGRLNASYVAEDNERKTPVMIHRAILGSIERFIGIITEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P QA+V  IT S  +Y Q +   L    L +++D RNE I +KIREH++K++
Sbjct: 531 GFFPAWLAPTQAVVMNITDSQADYVQNVVKTLSDAGLRVKSDLRNEKIGFKIREHTLKRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           P +++CGDKE +E  + +R          ++ +   IL  +    D +
Sbjct: 591 PYMLVCGDKEIAEGKVAVRTRKGADLGTFTVEEFTEILKNQVRNRDLK 638


>gi|330819285|ref|YP_004348147.1| threonyl-tRNA synthetase [Burkholderia gladioli BSR3]
 gi|327371280|gb|AEA62635.1| threonyl-tRNA synthetase [Burkholderia gladioli BSR3]
          Length = 682

 Score =  689 bits (1779), Expect = 0.0,   Method: Composition-based stats.
 Identities = 310/649 (47%), Positives = 437/649 (67%), Gaps = 14/649 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
             I LT PDGS + F    T ++VA +I   LA+ AVA  ++G++ DL D +  +  + +
Sbjct: 19  EPIDLTLPDGSHRGFATGTTVAEVAAAIGPGLARHAVAGELDGRLVDLGDAIEHDARLRV 78

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           ITP D   LA+IRHSCAH++  AV+ ++P+  + IGP+IEDGFYYD    +PF+ ++LA 
Sbjct: 79  ITPADEEGLAIIRHSCAHLLGHAVKQLYPDANMVIGPVIEDGFYYDIAYPRPFTPEDLAA 138

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE++M+E+I  D   +K+ L  E+A  LF  + EAYK+ ++E++P    + LY   E+ D
Sbjct: 139 IEQRMRELIDLDYEVIKRVLPREEAIRLFRERGEAYKLRLIEAMPEVAAMNLYFHQEYVD 198

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           +CRGPHV +T  +K F KL ++AGAYWRGD+  P L RIYGTAW   ++L  +L  LE++
Sbjct: 199 MCRGPHVPNTRFLKAF-KLTRLAGAYWRGDARNPQLQRIYGTAWADARQLAAHLERLEQA 257

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           E+RDHR+L RE+DLFH  ED  G +FWH +GW +F+ LI+YMRR + +  Y E+N+P V+
Sbjct: 258 ERRDHRRLGRELDLFHFQEDAPGAVFWHPRGWTVFRELIAYMRRRQEEAAYVEVNSPDVM 317

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D+ LW+ SGHW +YR +MF         +D R+ ALKPMNCPG V ++ HGLKSYR+LP+
Sbjct: 318 DRSLWEISGHWLNYRDHMFTT-----ATEDGRSLALKPMNCPGSVLLYRHGLKSYRDLPI 372

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+ EFG V+R EPSG+LHGL+RVR FTQDDAH++CT  QM  EC  +  L++ IY+ FGF
Sbjct: 373 RMGEFGKVHRYEPSGALHGLLRVRHFTQDDAHIYCTPAQMDQECRAVVALVLDIYRQFGF 432

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           E++ +KLSTRP  R+G +A WD  E  +   LD +       ++  +  GEGAFYGPK E
Sbjct: 433 EEVRIKLSTRPANRMGDEATWDRLEGALVNALDAMG------LDYRLNPGEGAFYGPKLE 486

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           ++L+DAIGRDWQCGT+QVD NLP RF   YV+   ++  PVM+HRA+FGS+ERFIGI+IE
Sbjct: 487 FVLRDAIGRDWQCGTLQVDMNLPERFGIEYVDEDGQRKRPVMLHRALFGSLERFIGILIE 546

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +  G LP WL+P+QA+V +I+    +YA+ +A  L +  L  E D R E I YKIRE ++
Sbjct: 547 HHAGKLPPWLAPVQAMVLSISEEHADYARNVAQWLAASGLRAEADLRREKIGYKIREQTL 606

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPD 649
           ++IP +++ G +E    SI IR  G      + L  A+ +L  E   PD
Sbjct: 607 QRIPFLLVAGTRERETGSIAIRSRGGLDLGTLPLAQAVALLVDECQAPD 655


>gi|163857146|ref|YP_001631444.1| threonyl-tRNA synthetase [Bordetella petrii DSM 12804]
 gi|229557977|sp|A9IRH6|SYT_BORPD RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|163260874|emb|CAP43176.1| thrS [Bordetella petrii]
          Length = 650

 Score =  689 bits (1779), Expect = 0.0,   Method: Composition-based stats.
 Identities = 314/648 (48%), Positives = 439/648 (67%), Gaps = 20/648 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAI---NGK--VCDLSDPVR-EG 57
            +++T PDGS + FP   T ++VA+SI   LAK A+   +    G+  + D S  +  + 
Sbjct: 1   MVQITLPDGSQRQFPGPVTVAEVAQSIGTGLAKAALGGRVTEPGGEPRLVDTSYRLEHDA 60

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSD 117
            + I+T +D   L +IRHS AH++A AV+ ++P+ QV IGP+I++GFYYDF  ++PF+ +
Sbjct: 61  QLAIVTAKDADGLDMIRHSTAHLLAYAVKELFPDAQVTIGPVIDNGFYYDFSYKRPFTPE 120

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +LA IEKKM E+  +D    ++  + + A   F+S  E YK EI+ SIPA E ++LYR+G
Sbjct: 121 DLAAIEKKMTELARKDETVTREEWTRDDAVAYFKSIGEDYKAEIIASIPANETLSLYREG 180

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
            + DLCRGPHV STG++K F KLMKVAGAYWRGDSN  ML RIYGTAW T+ +   YL+ 
Sbjct: 181 NFVDLCRGPHVPSTGKLKVF-KLMKVAGAYWRGDSNNEMLQRIYGTAWATKDDQDAYLHM 239

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINT 296
           LEE+E+RDHRK+ R++DLFH  ++  G+IFWH KGW ++Q +  YMR     + Y+E+  
Sbjct: 240 LEEAERRDHRKIGRDLDLFHFQDEAPGLIFWHPKGWALWQQVEQYMRAVYNDNGYQEVKA 299

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           PQ+LD  LW+++GHWD+YR NMF       T  + R + LKPMNCPGHV +FN GL SYR
Sbjct: 300 PQILDLSLWKKTGHWDNYRENMFT------TESENRVYGLKPMNCPGHVQIFNAGLHSYR 353

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ELP+R  EFG  +RNEPSGSLHG+MRVRGFTQDD H+FCT++Q+ +EC     L+  +Y+
Sbjct: 354 ELPLRYGEFGQCHRNEPSGSLHGMMRVRGFTQDDGHIFCTEDQLQDECADFTALLQKVYR 413

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           DFGF +++ K++TRPEKR+GSD +WD AE  +   L              +  GEGAFYG
Sbjct: 414 DFGFHEVLYKVATRPEKRIGSDDIWDKAETALMESLRRTGC------EFEISPGEGAFYG 467

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK EY LKDAIGR WQCGT+QVDF++P R  A YV++  ++  PVM+HRA+ GS+ERFIG
Sbjct: 468 PKIEYTLKDAIGRHWQCGTVQVDFSMPVRLGAEYVDAQDQRRAPVMLHRAILGSLERFIG 527

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           ++IEN  G +P WL+P+QA+V  I+  + +YA +I   LK     +++D R E I  KIR
Sbjct: 528 MLIENHAGAMPPWLAPVQAVVCCISEPSADYAAQITQTLKKQGFRVQSDLRGEKITRKIR 587

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           EHS++K+P I++ GDKE    ++ +R  G      ++L D    L ++
Sbjct: 588 EHSLQKVPYILVVGDKEKQNGTVAVRGLGGLDLGVIALEDFAARLAED 635


>gi|149374489|ref|ZP_01892263.1| threonyl-tRNA synthetase [Marinobacter algicola DG893]
 gi|149361192|gb|EDM49642.1| threonyl-tRNA synthetase [Marinobacter algicola DG893]
          Length = 641

 Score =  689 bits (1779), Expect = 0.0,   Method: Composition-based stats.
 Identities = 310/646 (47%), Positives = 439/646 (67%), Gaps = 18/646 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS ++F    T  DVA  I   LAK A+A  +NGK+ D S P+  +  +
Sbjct: 1   MPV---VTLPDGSHRSFVESVTVHDVAADIGAGLAKAAIAGRVNGKLVDTSFPIEEDAEL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            I+T  D   + +IRHS AH++A AV+ ++P  QV IGP++++GFYYDF  ++PF++++L
Sbjct: 58  AIVTERDEDGVDIIRHSTAHLLAMAVKELFPSAQVTIGPVVDNGFYYDFKFDRPFTNEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           ++IEK+M+E+  +D P  +  +S ++A  LF+   E YKV I+E IP +E+++ YRQG++
Sbjct: 118 SRIEKRMEELAKQDIPVSRSVMSRDEAVRLFDEMGEEYKVRIIEDIPGEEDLSFYRQGDF 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV +TG++K F KL KVAGAYWRGD++   L R+YGTAW  +++L  YL+ LE
Sbjct: 178 IDLCRGPHVPNTGKLKAF-KLTKVAGAYWRGDTSNEQLQRVYGTAWGNKKDLKAYLHRLE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQ 298
           E+EKRDHRK+ +++ LFH+ E+  G++FWH  GW ++Q +  YMR ++ K  Y+EI TPQ
Sbjct: 237 EAEKRDHRKIGKKLSLFHMQEEAPGMVFWHPDGWSLYQEIEQYMRGKQHKHGYQEIKTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+ + LW++SGHWD ++ +MF       T  +   +A+KPMNCP HV VFN GLKSY++L
Sbjct: 297 VVSRALWEKSGHWDKFKDDMFT------TESEKHDYAIKPMNCPCHVQVFNQGLKSYKDL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFGS +RNE SG+LHGLMRVRGFTQDDAH+FC ++ +  E      ++  IY DF
Sbjct: 351 PLRLAEFGSCHRNEASGALHGLMRVRGFTQDDAHIFCEEDAIQQEVSDFIGMLHEIYADF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF +I+ KLSTRPEKRVGSD +WD +E  ++  L+      ++ ++  +L GEGAFYGPK
Sbjct: 411 GFTEILYKLSTRPEKRVGSDEVWDKSEAALEEALN------REGVDWELLPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD IGR WQCGTIQVDF++P R  A YV  +SE+  PVM+HRAV GS ERFIGI+
Sbjct: 465 IEFSLKDCIGRVWQCGTIQVDFSMPGRLGAQYVADNSERKTPVMLHRAVLGSFERFIGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE ++G  P WL+P Q  V  IT +  +Y Q +A    S    +  D RNE I +KIREH
Sbjct: 525 IEEYEGAFPTWLAPTQIAVLNITDNQRDYCQNLAKKWDSLGYRVNADLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +I K+P +++ GDKE    ++ +R         +SL     ++  E
Sbjct: 585 TINKVPFLVVIGDKEVENNAVAVRTRKGEDLGTLSLEAFEQLMADE 630


>gi|330829614|ref|YP_004392566.1| Threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Aeromonas
           veronii B565]
 gi|328804750|gb|AEB49949.1| Threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Aeromonas
           veronii B565]
          Length = 642

 Score =  689 bits (1778), Expect = 0.0,   Method: Composition-based stats.
 Identities = 298/641 (46%), Positives = 435/641 (67%), Gaps = 16/641 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  DVA  I   LAK  +A  +NG++ D  + +  + ++ IIT +
Sbjct: 4   ITLPDGSQRQFAHSVSVMDVAADIGPGLAKACIAGRVNGELVDACELIEADAALAIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L ++RHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D ++  + ++LA +E++
Sbjct: 64  DEEGLDILRHSCAHLLGHAIKQLWPQTKMAIGPVIDNGFYYDVDLDRTLTDEDLAALEER 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE-SIPAKENVTLYRQGEWFDLCR 184
           M  ++A+D   +K+ +S ++AR++FE++ E+YKVEIL+ +I   +   LY   E+ D+CR
Sbjct: 124 MLALVAKDYDVIKKKVSWQEARDVFEARGESYKVEILDQNIARDDQPGLYHHEEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +      F KL+K++GAYWRGDSN  ML RIYGTAW  +++L  YL  LEE+ KR
Sbjct: 184 GPHVPNMRHCHHF-KLLKMSGAYWRGDSNNKMLQRIYGTAWADKKQLKAYLQRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF+ L +++R K+K+ DY+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELETFIRGKLKEYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SGHW+ Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWERSGHWEKYAQAMFT------TQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+  E      ++  +Y  FGFE I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIMEEVSGCIRMVYDVYGTFGFENI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPE+R+GSD +WD AE  +   L+       + +   +  GEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEQRIGSDEMWDRAEKALAEALEL------NGLKYDLQPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF LP R  A YV  ++++  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 HDCLDRAWQCGTVQLDFALPGRLGATYVGENNDRHVPVMIHRAILGSIERFIGILTEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P QA+V  IT +  +YA ++A  L    L  + D RNE I +KIREH++K++
Sbjct: 531 GLFPTWLAPTQAVVMNITDNQADYAVKVAKALNDAGLRAKADLRNEKIGFKIREHTLKRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P +++CGDKE     I +R           + + I +LT+E
Sbjct: 591 PFMLVCGDKEVEAGKIAVRTRKGADLGTYPVEEFIALLTQE 631


>gi|172087694|ref|YP_204597.2| threonyl-tRNA synthetase [Vibrio fischeri ES114]
 gi|197335357|ref|YP_002156016.1| threonyl-tRNA synthetase [Vibrio fischeri MJ11]
 gi|171902287|gb|AAW85709.2| threonyl-tRNA synthetase [Vibrio fischeri ES114]
 gi|197316847|gb|ACH66294.1| threonyl-tRNA synthetase [Vibrio fischeri MJ11]
          Length = 642

 Score =  689 bits (1778), Expect = 0.0,   Method: Composition-based stats.
 Identities = 299/647 (46%), Positives = 430/647 (66%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS + F    +  DVA  I   LAK  +A  ++G   D  D +  +  +
Sbjct: 1   MPV---ITLPDGSQRQFDNAVSTMDVAADIGPGLAKACIAGRVDGVRVDACDLIENDAQL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT +D   L +IRHSCAH++  AV+ ++PE ++AIGP I++GFYYD D E   + ++L
Sbjct: 58  EIITAKDEDGLEIIRHSCAHLLGHAVKQLFPEAKMAIGPTIDNGFYYDIDMEHSLTQEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
            +IEK+M+++       +K+ +S ++AR+ FE++ E YK+EIL E++   +   LY   E
Sbjct: 118 DKIEKRMKDLAKTKYQVIKKNVSWQEARDTFEARGETYKIEILDENVSKDDRPGLYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +    + F K++ VAGAYWRG+S+  ML R+YGTA+  ++ L  +L  L
Sbjct: 178 YIDMCRGPHVPNMSFCQNF-KILNVAGAYWRGNSDNKMLQRVYGTAFQDKKLLKAHLIRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
           EE+ KRDHRK+ +++DLFH+ ++  G++FWH  GW IF+ L  ++R K+ + DY+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLFHMQQEAPGMVFWHHNGWTIFRELEVFVREKLTQYDYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+
Sbjct: 297 LMMDRVLWERSGHWDKYAEAMFT------TSSENREYAIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSG+LHG+MRVRGFTQDDAHVFCT+ Q+  E      ++   Y+ 
Sbjct: 351 LPLRMAEFGSCHRNEPSGALHGIMRVRGFTQDDAHVFCTEAQVQQEVKSCIEMVYDTYQT 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF+ I+VKLSTRPE+RVGSD +WD AE+ +K  L++++      I   +  GEGAFYGP
Sbjct: 411 FGFDNIVVKLSTRPEQRVGSDEMWDRAESDLKLALESME------IPYEIQEGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF LP R  A YV   +E+  PVMIHRA+ GS+ERFIGI
Sbjct: 465 KIEFTLHDCLDRAWQCGTVQLDFALPERLGATYVGEDNERHTPVMIHRAILGSLERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE++ G  P WL+P QAIV  IT    +Y QEIA  L+ +   ++ D RNE I +KIRE
Sbjct: 525 LIEDYAGFFPTWLAPEQAIVMGITDKQADYVQEIAKKLQKNGFRVKADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H++K++P +++CGD+E     I +R        K  + D +  L +E
Sbjct: 585 HTLKRVPYMLVCGDQEMEAGEIAVRTRKGKDLGKFKIDDFVAFLQQE 631


>gi|257455909|ref|ZP_05621126.1| threonyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
 gi|257446655|gb|EEV21681.1| threonyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
          Length = 642

 Score =  689 bits (1777), Expect = 0.0,   Method: Composition-based stats.
 Identities = 299/642 (46%), Positives = 432/642 (67%), Gaps = 15/642 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +T P+G IK F    +  +VA+SI   LAK  VA  +NGK+ D  DP+  + S++II
Sbjct: 1   MVAITLPNGDIKQFDGQTSVMEVAQSIGAGLAKATVAGRVNGKLVDACDPISEDASVQII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TP+D   + +IRHS AH++  AV+ ++PEV++ IGP+IE+GFYYD   E+PF+ +++ +I
Sbjct: 61  TPKDEEGVEIIRHSTAHLLGHAVKQLYPEVKMVIGPVIEEGFYYDIYSERPFTPEDMEKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M ++I +D   +K+    ++  ++F+ + E YK+ ++E +P +  + LY   E+ D+
Sbjct: 121 EARMTQLINQDYDVIKKMTPRDEVIKVFQDRGETYKLRLIEDMPNETQMGLYYHQEYVDM 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +T  +K F KL K++GAYWRGD+    L RIYGTAW  +++L  Y+  +EE+E
Sbjct: 181 CRGPHVPNTRFLKAF-KLTKMSGAYWRGDAKNEQLQRIYGTAWADKKDLKAYIQRIEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KRDHRK+ + +DLFH+ E+  G++FWH  GW ++Q L  YMR+ +  + Y EI TPQ++D
Sbjct: 240 KRDHRKIGKALDLFHMQEEAPGMVFWHPNGWTMWQVLEQYMRKVQKDNGYLEIKTPQIVD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW++SGHW++Y   MF       T  + R +A+KPMNCP HV VFN GLKSYR+LP+R
Sbjct: 300 RSLWEKSGHWENYGDMMFT------THSEKRDYAIKPMNCPCHVQVFNQGLKSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFGS +RNEPSGSLHG+MRVRGFTQDDAH+FC+ EQ+  E      L + +YKDFGF+
Sbjct: 354 LAEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCSNEQIKQEAQDFIKLTLDVYKDFGFD 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + +KLSTRPEKRVG+D LWD AE  +   LD         ++   L GEGAFYGPK E+
Sbjct: 414 DVQMKLSTRPEKRVGADELWDLAEKDLADALDNAG------LDWQYLPGEGAFYGPKIEF 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            LKD +GR WQCGT+Q+DFNLP R  A +VN   E+  PVM+HRA+ GS ERFIG++IE+
Sbjct: 468 SLKDCLGRVWQCGTLQLDFNLPERLGAEFVNEQGERERPVMLHRAILGSFERFIGMLIEH 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G +P+WL+P Q +V  IT +     Q++A  L    L + TD RNE I +KIRE +++
Sbjct: 528 YAGWMPVWLAPQQVVVMNITDNQAPACQKVAEQLNQAGLRVITDLRNEKIGFKIRERTLE 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +IP +I+ GDKE     + +R         +S+   I ++ +
Sbjct: 588 RIPYMIVMGDKEVESNQVNVRTREGDNLGVMSIDAFIDLVNQ 629


>gi|163801061|ref|ZP_02194961.1| threonyl-tRNA synthetase [Vibrio sp. AND4]
 gi|159175410|gb|EDP60207.1| threonyl-tRNA synthetase [Vibrio sp. AND4]
          Length = 642

 Score =  689 bits (1777), Expect = 0.0,   Method: Composition-based stats.
 Identities = 296/642 (46%), Positives = 427/642 (66%), Gaps = 17/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  +VA+SI   LAK  +A  +NG   D  DP+  + S+EIIT +
Sbjct: 4   ITLPDGSQRQFDNPVSTMEVAQSIGPGLAKATIAGRVNGNRVDACDPIEEDASLEIITVK 63

Query: 66  DP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  A++ ++P+ ++AIGP I++GFYYD D ++  + D+L +IEK
Sbjct: 64  DEVDGLEIVRHSCAHLLGHALKQLYPQAKMAIGPTIDNGFYYDIDLDESLTQDDLEKIEK 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLC 183
           +M+E+       +K+ +S ++AR+ FES+ E YKVEIL E++   +   LY   E+ D+C
Sbjct: 124 RMKELAKTKYEVVKKKVSWQEARDTFESRGEPYKVEILDENVSRDDRPGLYHHEEYIDMC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +    + F  +  VAGAYWRG+S+  ML RIYGTA++ ++ L  +L  LEE+ K
Sbjct: 184 RGPHVPNMSFCQHFTLM-NVAGAYWRGNSDNKMLQRIYGTAFHDKKALKAHLTRLEEAAK 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ ++  G++FWH  GW IF+ L  ++R K+ +  Y+E+  P ++D+
Sbjct: 243 RDHRKLGKQLDLFHMQQEAPGMVFWHHNGWSIFRDLEVFVRSKLDEYGYQEVKGPLIMDR 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y   MF       T  + R +ALKPMNCPGHV +FN GLKSYR+LP+R+
Sbjct: 303 VLWERSGHWDKYADAMFT------TASENREYALKPMNCPGHVQIFNQGLKSYRDLPLRM 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHG+MRVRGFTQDDAH+FCT+ Q+  E      ++   Y+ FGF+ 
Sbjct: 357 AEFGSCHRNEPSGALHGIMRVRGFTQDDAHIFCTESQIQEEVTSCIKMVYDTYQTFGFDN 416

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+VKLSTRPE+RVGSD +WD +E  +K  L++++      I   +  GEGAFYGPK E+ 
Sbjct: 417 IVVKLSTRPEQRVGSDEIWDQSEEALKQSLESME------IPYEIQEGEGAFYGPKIEFT 470

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D + R WQCGT+Q+DFNLP R  A YV  ++E+  PVMIHRA+ GS+ERFIGI+IE +
Sbjct: 471 LYDCLDRAWQCGTVQLDFNLPGRLGATYVGENNERLVPVMIHRAILGSLERFIGILIEEY 530

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P QAI+  IT    +Y QE+   L+   +  + D RNE I +KIREH++K+
Sbjct: 531 AGFFPTWLAPEQAILMNITDKQSDYVQEVVQKLQKSGIRAKADLRNEKIGFKIREHTLKR 590

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P +++ GD+E     I +R        K  + D I  +  E
Sbjct: 591 VPYMLVVGDQEMEAGEIAVRTRKGKDLGKFKVDDFIAYIQDE 632


>gi|291559712|emb|CBL38512.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase
           [butyrate-producing bacterium SSC/2]
          Length = 641

 Score =  688 bits (1776), Expect = 0.0,   Method: Composition-based stats.
 Identities = 274/642 (42%), Positives = 411/642 (64%), Gaps = 16/642 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K+T  DGS+K +  + +  D+A+ IS  LA+ A A  ++G+V DL   + ++  + I+T
Sbjct: 1   MKITLKDGSVKEYENNMSVIDIAKDISEGLARVACAGEVDGEVVDLRTVIDKDCELNILT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +        RH+ +HI+A+AV+ ++PE ++AIGP I++GFYYD +K+ PF+ ++L +IE
Sbjct: 61  FDSDEGKHAFRHTASHILAQAVKRLYPETKLAIGPSIDNGFYYDMEKDTPFTQEDLEKIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M++I+  +          ++A    + + E YKVE++E +P    ++ Y+QGE+ DLC
Sbjct: 121 KEMKKIVKENLEITSFTKPRDEAIAFMKERNEPYKVELIEDLPEDSVISFYQQGEFVDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+ +T  VK F KL  +AGAYWRGD +  ML+RIYGTA+  + EL  YL  +EE+ K
Sbjct: 181 AGPHLMTTKPVKAF-KLTSIAGAYWRGDEHNQMLTRIYGTAFTKKAELDAYLTMMEEARK 239

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           RDHRKL +E+ LF + E+G G  F+  KG  +  TL+ Y R    K  Y EI+TP +L +
Sbjct: 240 RDHRKLGKELGLFMMREEGPGFPFFLPKGMVLKNTLLDYWREIHQKAGYVEISTPIMLSR 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
           HLW+ SGHWD Y+ NM+       T+ D + FA+KPMNCPG V V++   +SYR+LP+R+
Sbjct: 300 HLWETSGHWDHYKENMYT------TVIDDQDFAIKPMNCPGGVLVYDSEPRSYRDLPLRM 353

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            E G V+R+E SG LHGLMRVR FTQDDAH+F T +Q+ +E   +  LI  +Y  FGF+ 
Sbjct: 354 GELGLVHRHEKSGQLHGLMRVRCFTQDDAHIFMTPDQIKDEIKGVAGLIDQVYNLFGFKY 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRP+  +GSD  W+ A + ++  LD +       ++  V  G+GAFYGPK ++ 
Sbjct: 414 H-VELSTRPDDSMGSDEDWELATDSLRAALDDLG------LDYVVNEGDGAFYGPKIDFH 466

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+D+IGR WQCGTIQ+DF LP RF+  Y  +  EK  P+MIHR  FGSIERFIGI+IE+F
Sbjct: 467 LEDSIGRTWQCGTIQLDFQLPLRFDLHYTGADGEKHRPIMIHRVAFGSIERFIGILIEHF 526

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P+Q  V  I+   ++YA ++ + LK+  +  + D R E + YKIRE  ++K
Sbjct: 527 AGAFPTWLAPVQVEVIPISDKHLDYANKVLDTLKAAGIRADIDTRAEKMGYKIREAQLQK 586

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IP +++ G KE    ++ +R        ++ L D +  + +E
Sbjct: 587 IPYMLVVGGKEEENGAVSVRSRFKGDEGQMKLDDFLAAIKEE 628


>gi|319942329|ref|ZP_08016644.1| threonyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
 gi|319804202|gb|EFW01102.1| threonyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
          Length = 636

 Score =  688 bits (1776), Expect = 0.0,   Method: Composition-based stats.
 Identities = 316/642 (49%), Positives = 437/642 (68%), Gaps = 15/642 (2%)

Query: 6   KLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITP 64
            +T P GS + +    T + VA SI   LAK A+A  ++GK+ DLS  +  + ++ IIT 
Sbjct: 3   SVTLPGGSKREYEGPVTVAQVAASIGAGLAKAALAGRVDGKLVDLSHVIDGDAAVAIITA 62

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
            DP  L +IRHS AH+MA+AV+ ++PE QV IGP IE+GFYYDF   + F+ ++L  IE 
Sbjct: 63  RDPEGLEIIRHSTAHLMAQAVKELFPEAQVTIGPAIENGFYYDFSYTRAFTPEDLKAIEA 122

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
           +M E++ ++ P +++ +  E+A + F++  E YK EI+ SIPA E ++LYRQG++ DLCR
Sbjct: 123 RMDELVKKNIPIVREEMPREEAIDFFKALGEHYKAEIISSIPAGEVISLYRQGDFVDLCR 182

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV STG +K    + KVAGAYWRGDS   ML RIYGTAW T+ E   YL  L E+EKR
Sbjct: 183 GPHVPSTGCLKVHHLM-KVAGAYWRGDSKNEMLQRIYGTAWATKDEQKAYLEMLAEAEKR 241

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQH 303
           DHR+L RE+DLFH+ ++  G++FWH KGW ++Q +  +MRR  + + YEE+  PQ+LD+ 
Sbjct: 242 DHRRLGRELDLFHLQDEAPGMVFWHAKGWALWQVIEQFMRRVYQDNGYEEVKAPQLLDRS 301

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SGHW  YR NMF       T  + R +ALKPMNCPGH+ +FN  L+SYR+LP+R+ 
Sbjct: 302 LWERSGHWAKYRDNMFT------TESENRYYALKPMNCPGHIQIFNSKLRSYRDLPLRIG 355

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFG  +RNE SGSLHGLMRVRGFTQDD H+FCT++Q+  EC     L+  +YK FGF  I
Sbjct: 356 EFGQCHRNESSGSLHGLMRVRGFTQDDGHIFCTEDQILAECEAFTALVQKVYKTFGFTDI 415

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
             K++TRP  R+G DA+WD AE+ +   LD +       I   VL+GEGAFYGPK EY L
Sbjct: 416 AYKVATRPAMRIGEDAVWDKAEHALMASLDALG------IKYEVLVGEGAFYGPKIEYHL 469

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           KD +GR WQCGT+QVDF +P R  A YV   + +  PVM+HRA+ GS+ER+IG++IE F 
Sbjct: 470 KDCLGRSWQCGTVQVDFQMPGRLGAEYVAEDNSRKIPVMLHRAILGSLERWIGMLIEEFA 529

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P+WL+PIQ  VT+IT +   YA+++A  L +  L ++TD R+E INYKIRE S++K+
Sbjct: 530 GAFPVWLAPIQCAVTSITDNQGAYAKDVAAKLHAAGLRVQTDLRSEKINYKIRELSLQKL 589

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           P I++ G+KEA   ++ +R  G      +SL   I  ++ E+
Sbjct: 590 PYILVVGEKEAQTGTVSVRARGGENLGVMSLDAFIERISTEN 631


>gi|326391979|ref|ZP_08213481.1| threonyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
 gi|325991980|gb|EGD50470.1| threonyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
          Length = 634

 Score =  688 bits (1776), Expect = 0.0,   Method: Composition-based stats.
 Identities = 293/640 (45%), Positives = 411/640 (64%), Gaps = 16/640 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T  DG+ + F    T  ++A+SIS  LAK+AV    NGKV +L+  +  +G +EI+T +
Sbjct: 3   ITLKDGTQREFEKGMTVYEIAKSISERLAKEAVGGKFNGKVVELNTKIEEDGKLEILTFD 62

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D     +  H+ +HI+A+AV+ ++ +V++AIGP I++GFYYDFD E+PF++++   IE++
Sbjct: 63  DEEGKKIYWHTSSHILAQAVKRLFKDVKLAIGPAIDNGFYYDFDTERPFTTEDFEAIEQE 122

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M  II  D    +  L  ++A +L + K E YKVE++E IP  E ++ Y+QGE+ DLC G
Sbjct: 123 MNRIIKEDYKLERFVLPKDEAIKLMKEKDEPYKVELIEEIPEGEEISFYKQGEFTDLCAG 182

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PH+ STG VK   KL+ VAGAYW+GD    ML RIYG ++  +  L QYL+ LEE++KRD
Sbjct: 183 PHLMSTGMVKTI-KLLSVAGAYWKGDEKNKMLQRIYGISFPKKSMLDQYLHMLEEAKKRD 241

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHL 304
           HRKL +E+DLF I  +G G  F+H KG  I   L  + R   IK  Y+EI TP +L++ L
Sbjct: 242 HRKLGKELDLFSIHPEGPGFPFFHPKGMIIRNILEDFWRKEHIKHGYQEIKTPIILNEEL 301

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHWD Y+ NM+       T  D  T+A+KPMNCPG + V+   + SYR+LP+RL E
Sbjct: 302 WRRSGHWDHYKENMYF------TEIDGETYAIKPMNCPGAMLVYKSTMHSYRDLPLRLCE 355

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
            G V+R+E SG LHGLMRVR FTQDDAH+F T EQ+ +E L + NL+   YK FGFE   
Sbjct: 356 LGLVHRHELSGVLHGLMRVRSFTQDDAHLFMTPEQVEDEILGVINLVDYFYKIFGFEYF- 414

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           V+LSTRPE  +GSD  W+ A N +   L+ +       +   V  G+GAFYGPK ++ LK
Sbjct: 415 VELSTRPENSMGSDEDWELATNALISALNRVN------LPYKVNEGDGAFYGPKIDFHLK 468

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D+IGR WQCGTIQ+DF +P RF   Y+    EK  P+M+HR ++GSIERFIGI+ E+F G
Sbjct: 469 DSIGRTWQCGTIQLDFQMPERFELEYIGPDGEKHRPIMLHRVIYGSIERFIGILTEHFAG 528

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P WL+P+Q  V  I+     YAQ +   L  + +  E D RNE I YKIRE  ++KIP
Sbjct: 529 AFPTWLAPVQVRVLPISDKHYAYAQNVYGRLLENDIRAELDDRNEKIGYKIREAQLQKIP 588

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            ++I GDKE  + ++ +R         +SL + I  + KE
Sbjct: 589 YMLIVGDKEVEQGTVSLRSRKEGDLGAISLNEFIEKILKE 628


>gi|325276812|ref|ZP_08142513.1| threonyl-tRNA synthetase [Pseudomonas sp. TJI-51]
 gi|324098050|gb|EGB96195.1| threonyl-tRNA synthetase [Pseudomonas sp. TJI-51]
          Length = 640

 Score =  688 bits (1776), Expect = 0.0,   Method: Composition-based stats.
 Identities = 290/645 (44%), Positives = 430/645 (66%), Gaps = 18/645 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP    +T PDGS ++F    + +DVA SI   LAK  VA  ++GK+ D  D +  + ++
Sbjct: 1   MPV---ITLPDGSQRSFDHAVSVADVAASIGAGLAKATVAGKVDGKLVDACDLISHDATL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           +IITP+D   L +IRHSCAH++  AV+ ++P  ++ IGP+I++GFYYD   E+PF+ ++L
Sbjct: 58  QIITPKDAEGLEIIRHSCAHLVGHAVKQLYPTAKMVIGPVIDEGFYYDIAYERPFTPEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A IEK+M E+I +D   +K+     +  ++F ++ E YK+ ++E +P ++ + LY   E+
Sbjct: 118 AAIEKRMMELIDKDYDVVKKVTPRAEVIDVFTARGEDYKLRLVEDMPDEQAMGLYYHEEY 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            D+CRGPHV +T  +K F KL K++GAYWRGD+    L R+YGTAW  +++L  Y+  +E
Sbjct: 178 VDMCRGPHVPNTRFLKAF-KLTKLSGAYWRGDAKNEQLQRVYGTAWADKKQLAAYIQRIE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+EKRDHRK+ +++DLFH+ E+  G++FWH  GW ++Q L  YMR  + ++ Y+EI TPQ
Sbjct: 237 EAEKRDHRKIGKQLDLFHLQEEAPGMVFWHANGWTVYQVLEQYMRGVQRENGYQEIKTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHW +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYR+L
Sbjct: 297 VVDRILWERSGHWSNYAENMFT------TSSESRDYAVKPMNCPCHVQVFNQGLKSYRDL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFG+ +RNEPSG+LHG+MRVRGF QDDAH+FCT+EQ+  E      L + +YKDF
Sbjct: 351 PLRLAEFGACHRNEPSGALHGIMRVRGFVQDDAHIFCTEEQVKKEAADFIKLTLDVYKDF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF  I +KLSTRP KRVGS+ LWD AE  +   L+      +  +      GEGAFYGPK
Sbjct: 411 GFSDIAMKLSTRPAKRVGSEELWDRAEGALADALN------ESGLEWEYQPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ L+D +GR+WQCGT+Q D NLP R +A Y+   + +  PVM+HRA+ GS ERFIG++
Sbjct: 465 IEFTLRDCLGRNWQCGTLQYDPNLPERLDASYIAEDNSRVRPVMLHRAILGSFERFIGML 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE++ G  P WL+P QA++  IT    ++A ++   L       ++D RNE I +KIREH
Sbjct: 525 IEHYAGVFPAWLAPTQAVIMNITDKQADFALQVEKSLNGSGFRAKSDLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           ++ K+P +++ GD+E   +++ +R         + +   + +L +
Sbjct: 585 TLLKVPYLLVIGDREVETQTVAVRTREGADLGSMPVAQFVELLNQ 629


>gi|330958898|gb|EGH59158.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. maculicola str.
           ES4326]
          Length = 640

 Score =  688 bits (1775), Expect = 0.0,   Method: Composition-based stats.
 Identities = 302/645 (46%), Positives = 436/645 (67%), Gaps = 18/645 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS ++F    + +DVA SI   LAK  VA  +NGK+ D  D +  + S+
Sbjct: 1   MP---TITLPDGSQRSFDHAVSVADVALSIGAGLAKATVAGKVNGKLVDACDLIENDASL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           +IITP+D   L +IRHSCAH++  AV+ ++P  ++ IGP+I+DGFYYD   E+PF+ D++
Sbjct: 58  QIITPKDQEGLEIIRHSCAHLVGHAVKQLYPTAKMVIGPVIDDGFYYDIAYERPFTPDDM 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A IE++MQ++I +D   +K+     +  E+F ++ E YK+ ++E +P ++ + LY   E+
Sbjct: 118 AAIEQRMQQLIEKDYDVIKKVTPRAEVIEVFTARHEDYKLRLVEDMPNEQAMGLYYHEEY 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            D+CRGPHV +T  +K F KL K++GAYWRGD+    L RIYGTAW  +++L  Y+  +E
Sbjct: 178 VDMCRGPHVPNTRFLKSF-KLTKLSGAYWRGDAKNEQLQRIYGTAWADKKQLAAYIQRIE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+EKRDHRK+ + + LFH  E+  G++FWH +GW ++Q L  YMR+ + ++ Y EI TPQ
Sbjct: 237 EAEKRDHRKIGKRLGLFHTQEEAPGMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHW +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYREL
Sbjct: 297 VVDRSLWEKSGHWANYADNMFT------TESESRDYAIKPMNCPCHVQVFNQGLKSYREL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFG+ +RNEPSG+LHG+MRVRGFTQDDAH+FCT++QM  E      L +++Y DF
Sbjct: 351 PMRLAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEDQMQAESAAFIKLTLAVYADF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+ I +KLSTRPEKRVGSD LWD AE+ +   LD+        +   +  GEGAFYGPK
Sbjct: 411 GFKDIELKLSTRPEKRVGSDELWDRAESALASALDSAG------LPYDLQPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD +GR WQCGT+Q+DFNLP R +A YV+  + + +PVM+HRA+ GS ERFIGI+
Sbjct: 465 IEFSLKDCLGRVWQCGTLQLDFNLPIRLSAEYVSEDNSRKNPVMLHRAILGSFERFIGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+++G  P WL+P QA++  IT    ++A E+   L       ++D RNE I +KIREH
Sbjct: 525 IEHYEGAFPAWLAPTQAVIMNITDKQADFALEVEKTLAESGFRAKSDLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           ++ K+P +++ GD+E   +++ +R         + +      L +
Sbjct: 585 TLLKVPYLLVIGDREVEMQTVAVRTREGADLGSMPVAQFAEFLAQ 629


>gi|83647272|ref|YP_435707.1| threonyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
 gi|123753567|sp|Q2SDJ2|SYT_HAHCH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|83635315|gb|ABC31282.1| threonyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
          Length = 637

 Score =  688 bits (1775), Expect = 0.0,   Method: Composition-based stats.
 Identities = 324/647 (50%), Positives = 437/647 (67%), Gaps = 18/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP    +T PDGS + F    T  DVA  I   LAK AVA  ++G + D S  + ++  +
Sbjct: 1   MPV---ITLPDGSKREFSNPVTVLDVAADIGPGLAKAAVAGKVDGTLVDCSHVIDKDAEL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            I+T  D   + VIRHS AH++A AVQSI+P  QV IGP+IEDGFYYDF  E+PF+ D+L
Sbjct: 58  AIVTERDAEGVEVIRHSSAHLLAMAVQSIFPSAQVTIGPVIEDGFYYDFAFERPFTPDDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IE+KMQE+   D P  +  +S  +A ELF+   E YKVEI+ SIP +EN++ Y QG++
Sbjct: 118 VKIEEKMQELSDADLPVTRSLMSRSEAVELFKKMGEEYKVEIIASIPTEENLSFYSQGDF 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV STG++K F KL KVAGAYWRGDSN  ML RIYGTAW  +++L  YL+ +E
Sbjct: 178 IDLCRGPHVPSTGKIKAF-KLTKVAGAYWRGDSNNAMLQRIYGTAWGNKKDLKAYLHRIE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+EKRDHRK+ +++ LFH+ E+  G++FWH  GW ++Q +  YMR++++  DY+EI TPQ
Sbjct: 237 EAEKRDHRKIGKKLGLFHMQEEAPGMVFWHSDGWTLYQVIEQYMRKQLRKHDYKEIKTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+++ LW++SGHW+ +R +MF  +  D      R FA+KPMNCP HV VFN GL+SYR+L
Sbjct: 297 VVERTLWEKSGHWEKFRDDMFTTQSED------RDFAIKPMNCPCHVQVFNQGLRSYRDL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFGS +RNE SG+LHGLMRVRGFTQDDAH+FCT+EQ+  E  K  + +  +Y DF
Sbjct: 351 PLRLAEFGSCHRNEASGALHGLMRVRGFTQDDAHIFCTEEQIQEEVGKFIDFLHEVYADF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF +I+ KLSTRPEKRVGSD +WD +E  +   LD         +    L GEGAFYGPK
Sbjct: 411 GFSEIIYKLSTRPEKRVGSDEIWDKSEKALADALDA------KGLPWEELPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD +GR WQCGT+QVDF++P R  A YV+    +  PVM+HRA+ GS ERFIGI+
Sbjct: 465 VEFSLKDCLGRLWQCGTVQVDFSMPGRLGAQYVSDEQVRKTPVMLHRAILGSFERFIGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+++G  P WL+P Q  +  IT    +Y ++I  +L      +  D RNE INYKIREH
Sbjct: 525 IEHYEGAFPSWLAPTQVAILNITDKQADYCKKIGEILNDKGFRVRLDLRNEKINYKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           ++ ++P + + GDKE   + + IR         +S+     +L  E 
Sbjct: 585 TLNRVPFLAVVGDKEVETQCLAIRTRQGEDLGVMSISAFEELLQNEE 631


>gi|326386620|ref|ZP_08208242.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Novosphingobium
           nitrogenifigens DSM 19370]
 gi|326208935|gb|EGD59730.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Novosphingobium
           nitrogenifigens DSM 19370]
          Length = 663

 Score =  688 bits (1775), Expect = 0.0,   Method: Composition-based stats.
 Identities = 304/665 (45%), Positives = 428/665 (64%), Gaps = 16/665 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           M   +K+T PDGS++      T +++A +I   LAK A+   ++G++ D++ P+  + ++
Sbjct: 1   MSEVLKITLPDGSVREVAPGTTPAEIAAAIGPGLAKAAIGARVDGELYDITRPLTRDAAL 60

Query: 60  EIITPEDP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSD 117
            ++T  D   +L ++RH  AH++AEAVQ+++P  Q+  GP  +DGFYYDF   E+PF+ +
Sbjct: 61  ALVTARDEADALELVRHDFAHVLAEAVQALFPGTQITFGPATDDGFYYDFAPAERPFTEE 120

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +L  IE KM+EIIA D P  ++  +       +E+  E +K +    +P  E +T+Y  G
Sbjct: 121 DLPVIEAKMREIIAADKPLRREAWTRADLIARWEAAGETFKAQWAAELPEGEELTVYWSG 180

Query: 178 -EWFDLCRGPHVRSTGQVKKF-FKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
            +WFD+CRGPH+ STG++    FKL +V+GAYWRGD N  MLSRIYGT W  +++L  +L
Sbjct: 181 SDWFDMCRGPHLASTGKLDPAAFKLTRVSGAYWRGDQNNAMLSRIYGTGWLNKKQLDAHL 240

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEI 294
             LEE+ KRDHRKL +EMDLFH+  +  G +FWH KG++I++ L +YMRR I    Y E+
Sbjct: 241 TRLEEAAKRDHRKLGQEMDLFHLQAEAHGSVFWHPKGYRIWRELEAYMRRAIDGAGYREV 300

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL--------RTFALKPMNCPGHVA 346
            TPQV+D   W+ SGHW  YR NMF +      ++D            ALKPMNCP HV 
Sbjct: 301 KTPQVMDARQWEASGHWGKYRENMFVIPDEVPNVEDEGPLVSDDAAWMALKPMNCPAHVL 360

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           +F  G+KSYRELP+R  E G  +RNEP G+LHGLMRVR FTQDDAH+FC ++Q+  E   
Sbjct: 361 IFRQGIKSYRELPLRFYENGCCHRNEPHGALHGLMRVRQFTQDDAHIFCREDQIVEEVRA 420

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
              L   IYKDFGF   + KL+ RPEKR GSD +WD AE  ++  +     ++ +     
Sbjct: 421 FCELADRIYKDFGFTYAI-KLALRPEKRFGSDEMWDQAEAELRNAVAAAGLATPEY-GWE 478

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
            L GEGAFY PK E+ L DAIGR WQ GTIQ D  LP R +A Y+    E+  PVM+HRA
Sbjct: 479 ELPGEGAFYAPKLEWHLTDAIGRTWQVGTIQSDRVLPERLDASYIGEDGERHRPVMLHRA 538

Query: 527 VFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF 586
           +FGS ERFIGI+IE+F G LP+WL+P+QA+V TI S A  YAQE    L +  + +E D 
Sbjct: 539 IFGSYERFIGILIEHFAGKLPVWLAPVQAVVATIVSDADGYAQETVQTLAAAGIRVEADT 598

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           RNE INYK+REHS++K+P +++ G +EA E ++ +RR G    + + L +AI ++  E+ 
Sbjct: 599 RNEKINYKVREHSLQKVPFLLVVGKREAEEGTVAVRRLGEQQQKVLPLAEAIALIKGEAT 658

Query: 647 PPDCQ 651
            PD +
Sbjct: 659 APDLR 663


>gi|71066652|ref|YP_265379.1| threonyl-tRNA synthetase [Psychrobacter arcticus 273-4]
 gi|123775558|sp|Q4FPW3|SYT_PSYA2 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|71039637|gb|AAZ19945.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Psychrobacter
           arcticus 273-4]
          Length = 644

 Score =  688 bits (1775), Expect = 0.0,   Method: Composition-based stats.
 Identities = 306/640 (47%), Positives = 433/640 (67%), Gaps = 15/640 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +T PDGS+KNF  + T  +VA+SI   LAK  VA  ++G + D  DP+  +  +EI+
Sbjct: 1   MVAITLPDGSVKNFEGNTTVMEVAQSIGTGLAKATVAGRVDGHLVDAHDPIVADAKVEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TP D   + +IRHSCAH++  AV+ ++P+V++ IGP+I+DGFYYD   E PF+ + +A I
Sbjct: 61  TPRDDDGVDIIRHSCAHLLGHAVKQLYPDVKMVIGPVIDDGFYYDIYSETPFTPEHMAAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M E+I +D   +K+     +  ++FE + E YK++++  +P +E   LY   E+ D+
Sbjct: 121 EKRMMELIKQDYDVIKKITPRAEVIKIFEERGEDYKLKLINDMPGEEAFGLYHHQEYVDM 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +T  +K F KL K++GAYWRGD+    L RIYGTAW  +++L  Y+  +EE+E
Sbjct: 181 CRGPHVPNTRFLKVF-KLTKMSGAYWRGDAKNEQLQRIYGTAWADKKDLKTYIQRIEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KRDHRK+ + ++LFH+ E   G++FWH  GW I+Q L  YMR+ +  + YEEI TPQ++D
Sbjct: 240 KRDHRKIGKALNLFHMQEQAPGMVFWHANGWTIYQVLEQYMRKVQQDNGYEEIKTPQIVD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW++SGHW +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYR+LP+R
Sbjct: 300 RSLWERSGHWGNYATNMFT------TSSEKRDYAVKPMNCPCHVQVFNQGLKSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AEFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+ Q+  E      L +++Y+DFGF 
Sbjct: 354 MAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTQSQIQQEVADFIKLTLAVYEDFGFN 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            I++KLSTRPEKRVGSD  WD AE  +   LD         ++   L GEGAFYGPK E+
Sbjct: 414 NIIMKLSTRPEKRVGSDESWDFAEKALADALD------NSGLDWAYLPGEGAFYGPKIEF 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            LKD++GR WQCGTIQVD N+P R +A +VN  +E+  P+M+HRA+ GS ERFIGI+IEN
Sbjct: 468 SLKDSLGRVWQCGTIQVDPNMPERLDAEFVNEQNEREVPIMLHRAILGSFERFIGILIEN 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G +P+WL+P Q +V  IT    E  + + N LK   L   +D RNE I +KIRE +++
Sbjct: 528 YAGWMPVWLAPQQVVVMNITDKQAEACENVVNELKKSGLRAISDLRNEKIGFKIREKTLE 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           +IP +++ GDKE    S+ +R         +S+ + I ++
Sbjct: 588 RIPYMLVLGDKEVESGSVNVRTREGENLGVMSVAEFIILV 627


>gi|307266242|ref|ZP_07547784.1| threonyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306918772|gb|EFN49004.1| threonyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 634

 Score =  688 bits (1775), Expect = 0.0,   Method: Composition-based stats.
 Identities = 293/640 (45%), Positives = 411/640 (64%), Gaps = 16/640 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T  DG+ + F    T  ++A+SIS  LAK+AV    NGKV +L+  +  +G +EI+T +
Sbjct: 3   ITLKDGTQREFEKGMTVYEIAKSISERLAKEAVGGKFNGKVVELNTKIEEDGKLEILTFD 62

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D     +  H+ +HI+A+AV+ ++ +V++AIGP I++GFYYDFD E+PF++++   IE++
Sbjct: 63  DEEGKKIYWHTSSHILAQAVKRLFKDVKLAIGPAIDNGFYYDFDTERPFTTEDFEAIEQE 122

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M  II  D    +  L  ++A +L + K E YKVE++E IP  E ++ Y+QGE+ DLC G
Sbjct: 123 MNRIIKEDYKLERFVLPKDEAIKLMKEKDEPYKVELIEEIPEGEEISFYKQGEFTDLCAG 182

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PH+ STG VK   KL+ VAGAYW+GD    ML RIYG ++  +  L QYL+ LEE++KRD
Sbjct: 183 PHLMSTGMVKTI-KLLSVAGAYWKGDEKNKMLQRIYGISFPKKSMLDQYLHMLEEAKKRD 241

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHL 304
           HRKL +E+DLF I  +G G  F+H KG  I   L  + R   IK  Y+EI TP +L++ L
Sbjct: 242 HRKLGKELDLFSIHPEGPGFPFFHPKGMIIRNILEDFWRKEHIKHGYQEIKTPIILNEEL 301

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHWD Y+ NM+       T  D  T+A+KPMNCPG + V+   + SYR+LP+RL E
Sbjct: 302 WRRSGHWDHYKENMYF------TEIDGETYAIKPMNCPGAMLVYKSTMHSYRDLPLRLCE 355

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
            G V+R+E SG LHGLMRVR FTQDDAH+F T EQ+ +E L + NL+   YK FGFE   
Sbjct: 356 LGLVHRHELSGVLHGLMRVRSFTQDDAHLFMTPEQVEDEILGVINLVDYFYKIFGFEYF- 414

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           V+LSTRPE  +GSD  W+ A N +   L+ +       +   V  G+GAFYGPK ++ LK
Sbjct: 415 VELSTRPENSMGSDEDWELATNALISALNRVN------LPYKVNEGDGAFYGPKIDFHLK 468

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D+IGR WQCGTIQ+DF +P RF   Y+    EK  P+M+HR ++GSIERFIGI+ E+F G
Sbjct: 469 DSIGRTWQCGTIQLDFQMPERFELEYIGPDGEKHRPIMLHRVIYGSIERFIGILTEHFAG 528

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P WL+P+Q  V  I+     YAQ +   L  + +  E D RNE I YKIRE  ++KIP
Sbjct: 529 AFPTWLAPVQVRVLPISDKHYAYAQHVYGRLLENDIRAELDDRNEKIGYKIREAQLQKIP 588

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            ++I GDKE  + ++ +R         +SL + I  + KE
Sbjct: 589 YMLIVGDKEVEQGTVSLRSRKEGDLGAISLNEFIEKILKE 628


>gi|66045402|ref|YP_235243.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. syringae B728a]
 gi|75502334|sp|Q4ZUG7|SYT_PSEU2 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|63256109|gb|AAY37205.1| Threonyl-tRNA synthetase, class IIa [Pseudomonas syringae pv.
           syringae B728a]
          Length = 640

 Score =  688 bits (1775), Expect = 0.0,   Method: Composition-based stats.
 Identities = 300/645 (46%), Positives = 436/645 (67%), Gaps = 18/645 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS ++F    + +DVA SI   LAK  VA  ++GK+ D  D +  + S+
Sbjct: 1   MP---TITLPDGSQRSFDQAVSVADVALSIGAGLAKATVAGKVDGKLVDACDLIENDASL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           +IITP+D   L +IRHSCAH++  AV+ ++P  ++ IGP+I+DGFYYD   E+PF+ D++
Sbjct: 58  QIITPKDQEGLEIIRHSCAHLVGHAVKQLYPTAKMVIGPVIDDGFYYDIAYERPFTPDDM 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A IE++MQ++I +D   +K+     +  E+F ++ E YK+ ++E +P+++ + LY   E+
Sbjct: 118 AAIEQRMQQLIEKDYDVIKKVTPRAEVIEVFTARHEDYKLRLVEDMPSEQAMGLYYHEEY 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            D+CRGPHV +T  +K F KL K++GAYWRGD+    L R+YGTAW  +++L  Y+  +E
Sbjct: 178 VDMCRGPHVPNTRFLKSF-KLTKLSGAYWRGDAKNEQLQRVYGTAWADKKQLAAYIQRIE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+EKRDHRK+ + + LFH  E+  G++FWH +GW ++Q L  YMR+ + ++ Y EI TPQ
Sbjct: 237 EAEKRDHRKIGKRLGLFHTQEEAPGMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHW +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYREL
Sbjct: 297 VVDRSLWEKSGHWANYADNMFT------TESESRDYAIKPMNCPCHVQVFNQGLKSYREL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFG+ +RNEPSG+LHG+MRVRGFTQDDAH+FCT++QM  E      L + +Y DF
Sbjct: 351 PMRLAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEDQMQAESAAFIKLTLDVYADF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+ I +KLSTRPEKRVGSD LWD AE+ +   LD+        +   +  GEGAFYGPK
Sbjct: 411 GFKDIELKLSTRPEKRVGSDELWDRAESALASALDSAG------LPYDLQPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD +GR WQCGT+Q+DFNLP R +A YV+  + + +PVM+HRA+ GS ERFIGI+
Sbjct: 465 IEFSLKDCLGRVWQCGTLQLDFNLPIRLSAEYVSEDNSRKNPVMLHRAILGSFERFIGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+++G  P WL+P QA++  IT    ++A E+   L       ++D RNE I +KIREH
Sbjct: 525 IEHYEGAFPAWLAPTQAVIMNITDKQADFALEVEKTLAESGFRAKSDLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           ++ K+P +++ GD+E   +++ +R         + +      L +
Sbjct: 585 TLLKVPYLLVIGDREVEMQTVAVRTREGADLGSMPVAQFAEFLAQ 629


>gi|104781106|ref|YP_607604.1| threonyl-tRNA synthetase [Pseudomonas entomophila L48]
 gi|123079219|sp|Q1IC15|SYT_PSEE4 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|95110093|emb|CAK14798.1| threonyl-tRNA synthetase [Pseudomonas entomophila L48]
          Length = 640

 Score =  688 bits (1775), Expect = 0.0,   Method: Composition-based stats.
 Identities = 288/645 (44%), Positives = 430/645 (66%), Gaps = 18/645 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP    +T PDGS + F    + ++VA SI   LAK  +A  ++GK+ D  D +  + ++
Sbjct: 1   MPV---ITLPDGSQRTFDQPVSVAEVAASIGAGLAKATLAGKVDGKLVDACDKIDHDATL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           +IITP+D   L +IRHSCAH++  AV+ ++P  ++ IGP+I++GFYYD   E+PF+ D+L
Sbjct: 58  QIITPKDEEGLEIIRHSCAHLIGHAVKQLYPTAKMVIGPVIDEGFYYDIAYERPFTPDDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A IEK+MQ++I  D   +K+     +  ++F S+ E YK+ ++E +P ++ + LY   E+
Sbjct: 118 AAIEKRMQQLIDTDYDVVKKMTPRAEVIDVFTSRGEDYKLRLVEDMPDEQAMGLYYHEEY 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            D+CRGPHV +T  +K F KL K++GAYWRGD+    L R+YGTAW  +++L  Y+  +E
Sbjct: 178 VDMCRGPHVPNTRFLKAF-KLTKLSGAYWRGDAKNEQLQRVYGTAWADKKQLAAYIQRIE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+EKRDHRK+ +++DLFH+ E+  G++FWH  GW ++Q L  YMR+ + ++ Y+EI TPQ
Sbjct: 237 EAEKRDHRKIGKQLDLFHLQEEAPGMVFWHANGWTVYQVLEQYMRQVQRENGYQEIKTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHW +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYR+L
Sbjct: 297 VVDRILWERSGHWSNYAENMFT------TSSENRDYAVKPMNCPCHVQVFNQGLKSYRDL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFG+ +RNEPSG+LHG+MRVRGF QDDAH+FCT++Q+  E      L + +YKDF
Sbjct: 351 PLRLAEFGACHRNEPSGALHGIMRVRGFVQDDAHIFCTEDQVKKEAADFIKLTLDVYKDF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF  + +KLSTRP KRVGS+ LWD AE  +   L+      +  +      GEGAFYGPK
Sbjct: 411 GFTDVAMKLSTRPAKRVGSEELWDRAEGALADALN------ESGLEWEYQPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ L+D +GR+WQCGT+Q D NLP R +A Y+   + +  PVM+HRA+ GS ERFIG++
Sbjct: 465 IEFTLRDCLGRNWQCGTLQYDPNLPERLDASYIAEDNSRVRPVMLHRAILGSFERFIGML 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE++ G  P WL+P QA++  IT    ++A E+   L       ++D RNE I +KIREH
Sbjct: 525 IEHYAGVFPAWLAPTQAVIMNITDKQADFALEVEKALNGSGFRAKSDLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           ++ ++P +++ GD+E   +++ +R         + +     +L++
Sbjct: 585 TLLRVPYLLVIGDREVETQTVAVRTREGADLGSMPVAQFAELLSQ 629


>gi|113867357|ref|YP_725846.1| threonyl-tRNA synthetase [Ralstonia eutropha H16]
 gi|123134164|sp|Q0KBZ3|SYT_RALEH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|113526133|emb|CAJ92478.1| Threonyl-tRNA synthetase [Ralstonia eutropha H16]
          Length = 635

 Score =  688 bits (1774), Expect = 0.0,   Method: Composition-based stats.
 Identities = 320/643 (49%), Positives = 442/643 (68%), Gaps = 15/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +T PDGS + FP   T ++VA+ I   LAK A+A  ++G++ D S  + R+  + I+
Sbjct: 1   MIAITLPDGSRREFPGPVTVAEVAQGIGAGLAKAALAGKVDGQLVDTSYRIDRDAELAIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   + VIRHS AH++A AV+ ++PE QV IGP+IE+GFYYDF  ++PF+ ++LA I
Sbjct: 61  TDKDADGVDVIRHSTAHLLAYAVKELYPEAQVTIGPVIENGFYYDFAYKRPFTPEDLAAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EKKM E+  +D   +++  + ++A  LFES  E YK EI+ SIPA + + LYR+G + DL
Sbjct: 121 EKKMTELARKDEKVVREVWNRDEAVALFESMGEKYKAEIIASIPADQEIGLYREGSFVDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG++K F KLMKVAGAYWRGD+N  ML RIYGTAW  +++   YL+ LEE+E
Sbjct: 181 CRGPHVPSTGKLKVF-KLMKVAGAYWRGDANNEMLQRIYGTAWARKEDQEAYLHMLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLD 301
           KRDHRKL + +DLFH+ E+  G++FWH KGW+++Q +  YMR R     Y+E+ TPQV+D
Sbjct: 240 KRDHRKLGKTLDLFHLQEEAPGMVFWHPKGWQVWQAVEQYMRGRLTDAGYDEVRTPQVMD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW++SGHW +Y+ NMF       T  + R +A+KPMNCPGHV +FNHGL+SYR+LP+R
Sbjct: 300 RSLWEKSGHWQNYKENMFV------TESEKRDYAIKPMNCPGHVQIFNHGLRSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFG+ +RNEPSG+LHGLMRVRGF QDDAH+FCT+EQ+  E    + L  S+Y DFGF+
Sbjct: 354 LAEFGACHRNEPSGALHGLMRVRGFVQDDAHIFCTEEQIVAEAKAFNELAFSVYDDFGFK 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + VKLS RP++R GSD +WD AE  ++  L          ++   L GEGAFYGPK EY
Sbjct: 414 DVKVKLSLRPDQRAGSDEIWDHAEEGLRLALRACG------VDWEELPGEGAFYGPKVEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDAIGR WQCGT+Q+D  LP R +A YV+  + +  PVM+HRA+ GS ERF+GI++EN
Sbjct: 468 HIKDAIGRSWQCGTLQLDLVLPERLDAEYVSEDNSRKRPVMLHRAILGSFERFLGILLEN 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G LP WL+P Q +V  I  S  EYA+ +  LL+      + D RNE I YKIREHS++
Sbjct: 528 HAGALPAWLAPEQVVVMNIADSQAEYAESVVQLLQKQGFRAKADLRNEKITYKIREHSLQ 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K+P +++ GDKE     + +R  G+     + +   +  L  +
Sbjct: 588 KVPYLLVVGDKERDASQVAVRARGNVDLGVMPVSAFVERLKND 630


>gi|307611592|emb|CBX01274.1| threonyl tRNA synthetase [Legionella pneumophila 130b]
          Length = 637

 Score =  688 bits (1774), Expect = 0.0,   Method: Composition-based stats.
 Identities = 314/648 (48%), Positives = 434/648 (66%), Gaps = 18/648 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP    +  PDG++K+F    T  DVA  IS  LAK A+A  ++G + D S  +  + S+
Sbjct: 1   MP---NVKLPDGNVKHFEAPLTIYDVAHHISPGLAKAAIAGRVDGVLVDTSYLIKEDCSL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            I+T +   SL +IRHS AH++A+AV++++P  QV IGP+IEDGFYYDF  E+ F+ D+L
Sbjct: 58  IIVTEKHEDSLEIIRHSTAHLLAQAVKALFPSAQVTIGPVIEDGFYYDFAFERSFTPDDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           + IE KM E+   +    ++ L   +A + F+   E YK +I+  IP  E+++LYRQG++
Sbjct: 118 SLIEAKMHELAKANLSITRRELPRNEAIQYFKGLGEEYKAKIIADIPENESLSLYRQGDF 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV STG +K F KL KVAGAYWRGDSN  ML RIYGTAW  ++ L +YL+ LE
Sbjct: 178 EDLCRGPHVPSTGFLKAF-KLTKVAGAYWRGDSNNEMLQRIYGTAWADKKSLEEYLFRLE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+EKRDHRKL + +DLFH  +   G++FWH KGW I+Q L  YMR ++ D  Y+EI TPQ
Sbjct: 237 EAEKRDHRKLGKALDLFHFQDIAPGMVFWHPKGWTIYQELEHYMRNRLVDFGYQEIRTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D+ LW++SGHW ++R  MF       T  + R +A+KPM+CP HV ++NHGLKSYR+L
Sbjct: 297 LVDRSLWEKSGHWANFRDEMFV------TETENRHYAVKPMSCPCHVQIYNHGLKSYRDL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RL+EFG+ +R EPSG+LHGLMRVR   QDDAH+FCT++Q+ +E   +  L+ S+YKDF
Sbjct: 351 PLRLSEFGNCHRCEPSGALHGLMRVRNMVQDDAHIFCTEDQIQSEVAMMLELVQSVYKDF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF +I  +L+ RPEKRVGSD +WD AE  +K  +          I      GEGAFYGPK
Sbjct: 411 GFTEIKYRLALRPEKRVGSDDVWDKAETALKLAMQ------GRNIEWVDAPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E  L D +GR WQCGTIQVDF++P+R  A YV     K  PVM+HRA+ GS ERF+GI+
Sbjct: 465 IECSLSDCLGRIWQCGTIQVDFSMPARLEASYVAEDGSKQTPVMLHRAILGSFERFMGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE++ G LPLWLSP+QA+V TI+    EYA+++   L+   +    D RNE I +KIREH
Sbjct: 525 IEHYAGKLPLWLSPVQAVVLTISEKQNEYAEKVRKTLQKRGVRANFDLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           +++KIP +++ GDKE     + +R         +++      LT+E +
Sbjct: 585 TLQKIPYLLVVGDKEVENCQVAVRTRDGIDLGVMTIDTICDTLTQEII 632


>gi|330973951|gb|EGH74017.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 640

 Score =  688 bits (1774), Expect = 0.0,   Method: Composition-based stats.
 Identities = 300/645 (46%), Positives = 435/645 (67%), Gaps = 18/645 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS ++F    + +DVA SI   LAK  VA  ++GK+ D  D +  + S+
Sbjct: 1   MP---TITLPDGSQRSFDQAVSVADVALSIGAGLAKATVAGKVDGKLVDACDLIENDASL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           +IITP+D   L +IRHSCAH++  AV+ ++P  ++ IGP+I+DGFYYD   E+PF+ D++
Sbjct: 58  QIITPKDQEGLEIIRHSCAHLVGHAVKQLYPTAKMVIGPVIDDGFYYDIAYERPFTPDDM 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A IE++MQ++I +D   +K+     +  E+F ++ E YK+ ++E +P ++ + LY   E+
Sbjct: 118 AAIEQRMQQLIEKDYDVIKKVTPRAEVIEVFTARHEDYKLRLVEDMPNEQAMGLYYHEEY 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            D+CRGPHV +T  +K F KL K++GAYWRGD+    L R+YGTAW  +++L  Y+  +E
Sbjct: 178 VDMCRGPHVPNTRFLKSF-KLTKLSGAYWRGDAKNEQLQRVYGTAWADKKQLAAYIQRIE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+EKRDHRK+ + + LFH  E+  G++FWH +GW ++Q L  YMR+ + ++ Y EI TPQ
Sbjct: 237 EAEKRDHRKIGKRLGLFHTQEEAPGMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHW +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYREL
Sbjct: 297 VVDRSLWEKSGHWANYADNMFT------TESESRDYAIKPMNCPCHVQVFNQGLKSYREL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFG+ +RNEPSG+LHG+MRVRGFTQDDAH+FCT++QM  E      L + +Y DF
Sbjct: 351 PMRLAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEDQMQAESAAFIKLTLDVYADF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+ I +KLSTRPEKRVGSD LWD AE+ +   LD+        +   +  GEGAFYGPK
Sbjct: 411 GFKDIELKLSTRPEKRVGSDELWDRAESALASALDSAG------LPYDLQPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD +GR WQCGT+Q+DFNLP R +A YV+  + + +PVM+HRA+ GS ERFIGI+
Sbjct: 465 IEFSLKDCLGRVWQCGTLQLDFNLPIRLSAEYVSEDNSRKNPVMLHRAILGSFERFIGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+++G  P WL+P QA++  IT    ++A E+   L       ++D RNE I +KIREH
Sbjct: 525 IEHYEGAFPAWLAPTQAVIMNITDKQADFALEVEKTLAESGFRAKSDLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           ++ K+P +++ GD+E   +++ +R         + +      L +
Sbjct: 585 TLLKVPYLLVIGDREVEMQTVAVRTREGADLGSMPVAQFAEFLAQ 629


>gi|153835364|ref|ZP_01988031.1| threonyl-tRNA synthetase [Vibrio harveyi HY01]
 gi|148868112|gb|EDL67276.1| threonyl-tRNA synthetase [Vibrio harveyi HY01]
          Length = 642

 Score =  688 bits (1774), Expect = 0.0,   Method: Composition-based stats.
 Identities = 298/642 (46%), Positives = 427/642 (66%), Gaps = 17/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  +VA+SI   LAK  +A  +NG   D  D +  + S+EIIT +
Sbjct: 4   ITLPDGSQRQFDNPVSTMEVAQSIGPGLAKATIAGRVNGNRVDACDLIEEDASLEIITVK 63

Query: 66  DP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  A++ ++P+ ++AIGP I++GFYYD D ++  + D+L +IEK
Sbjct: 64  DEVDGLEIVRHSCAHLLGHALKQLYPQAKMAIGPTIDNGFYYDIDLDESLTQDDLEKIEK 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLC 183
           +M+E+       +K+ +S ++AR+ FES+ E YKVEIL E++   +   LY   E+ D+C
Sbjct: 124 RMKELAKTKYEVVKKKVSWQEARDTFESRGEPYKVEILDENVSRDDRPGLYHHEEYIDMC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV + G  + F  L  VAGAYWRG+S+  ML RIYGTA++ ++ L  +L  LEE+ K
Sbjct: 184 RGPHVPNMGFCQHFTLL-NVAGAYWRGNSDNKMLQRIYGTAFHDKKALKAHLTRLEEAAK 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ ++  G++FWH  GW IF+ L  ++R K+ +  Y+E+  P ++D+
Sbjct: 243 RDHRKLGKQLDLFHMQQEAPGMVFWHHNGWSIFRDLEVFVRSKLDEYGYQEVKGPLIMDR 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y   MF       T  + R +ALKPMNCPGHV +FN GLKSYR+LP+R+
Sbjct: 303 VLWERSGHWDKYADAMFT------TSSENREYALKPMNCPGHVQIFNQGLKSYRDLPLRM 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHG+MRVRGFTQDDAH+FCT+ Q+  E      ++   Y+ FGF+ 
Sbjct: 357 AEFGSCHRNEPSGALHGIMRVRGFTQDDAHIFCTESQIQEEVTNCIKMVYDTYQTFGFDN 416

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+VKLSTRPEKRVGSD +WD +E  +K  L++++      I   +  GEGAFYGPK E+ 
Sbjct: 417 IVVKLSTRPEKRVGSDEIWDQSEEALKQSLESME------IPYEIQEGEGAFYGPKIEFT 470

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D + R WQCGT+Q+DFNLP R  A YV  ++E+  PVMIHRA+ GS+ERFIGI+IE +
Sbjct: 471 LYDCLDRAWQCGTVQLDFNLPGRLGATYVGENNERLVPVMIHRAILGSLERFIGILIEEY 530

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P QAI+  IT    +Y QE+   L+   +  + D RNE I +KIREH++K+
Sbjct: 531 AGFFPTWLAPEQAILMNITDKQSDYVQEVVQKLQKSGIRAKADLRNEKIGFKIREHTLKR 590

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P +++ GD+E     I +R        K  + D I  +  E
Sbjct: 591 VPYMLVVGDQEMEAGEIAVRTRKGKDLGKFKVDDFIAYIQDE 632


>gi|293604689|ref|ZP_06687089.1| threonine--tRNA ligase [Achromobacter piechaudii ATCC 43553]
 gi|292816858|gb|EFF75939.1| threonine--tRNA ligase [Achromobacter piechaudii ATCC 43553]
          Length = 650

 Score =  688 bits (1774), Expect = 0.0,   Method: Composition-based stats.
 Identities = 315/648 (48%), Positives = 439/648 (67%), Gaps = 20/648 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAI-----NGKVCDLSDPVR-EG 57
            +++T PDGS + +P   T ++VA+SI   LAK A+   +       K+ D S  +  + 
Sbjct: 1   MVQITLPDGSQRQYPGPVTVAEVAQSIGTGLAKAALGGRVTFEGAESKLVDTSFRIEGDA 60

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSD 117
            + I+T +D   L +IRHS AH++A AV+ ++P+ QV IGP+I++GFYYDF  ++PF+ +
Sbjct: 61  RLAIVTAKDADGLDLIRHSTAHLLAYAVKELFPDAQVTIGPVIDNGFYYDFSYKRPFTPE 120

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +L  IEKKM E+  +D    ++  S + A E F+   E YK EI+ SIP+ E ++LYR+G
Sbjct: 121 DLVAIEKKMAELAKKDEVVTREEWSRDDAVEFFKGIGEKYKAEIIASIPSNEPLSLYREG 180

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           ++ DLCRGPHV STG++K F KLMKVAGAYWRGDS   ML RIYGTAW T++E   YL+ 
Sbjct: 181 DFIDLCRGPHVPSTGKLKVF-KLMKVAGAYWRGDSKNEMLQRIYGTAWATKEEQEAYLHM 239

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
           LEE+E+RDHRK+ RE+DLFH  ++  G+IFWH KGW ++Q +  YMR    +  Y+E+  
Sbjct: 240 LEEAERRDHRKIGRELDLFHFQDEAPGLIFWHPKGWALWQQVEQYMRAIYNNNGYQEVKA 299

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           PQ+LD  LW+++GHWD+YR NMF       T  + R + LKPMNCPGHV +FN GL SYR
Sbjct: 300 PQILDISLWKKTGHWDNYRENMFT------TESENRVYGLKPMNCPGHVQIFNAGLHSYR 353

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ELP+R  EFG  +RNEPSGSLHG+MRVRGFTQDD H+FCT+EQ+ +EC     L+  +Y+
Sbjct: 354 ELPLRYGEFGQCHRNEPSGSLHGMMRVRGFTQDDGHIFCTEEQLQDECADFTALLQKVYR 413

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           DFGF +++ K++TRPEKR+GSD +WD AE  +   L              +  GEGAFYG
Sbjct: 414 DFGFTEVLYKVATRPEKRIGSDEVWDTAEQALMESLRRTGC------EFEISPGEGAFYG 467

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK EY LKDAIGR WQCGTIQVDF++P R  A YV+ + ++  PVM+HRA+ GS+ERFIG
Sbjct: 468 PKVEYTLKDAIGRHWQCGTIQVDFSMPVRLGAEYVDQNDQRRPPVMLHRAILGSLERFIG 527

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           ++IEN  G +P WL+P+QA+V  I+  + +YA EI   LK     +E+D R E I  KIR
Sbjct: 528 MLIENHAGAMPPWLAPVQAVVCCISEPSADYAAEITQSLKKQGFRVESDLRGEKITRKIR 587

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           EHS++K+P I++ GDKE    ++ +R  G      ++  + +  L+++
Sbjct: 588 EHSLQKVPYILVVGDKEKQNGTVAVRGLGGLDLGAIAYDEFVARLSED 635


>gi|332971649|gb|EGK10599.1| threonine--tRNA ligase [Kingella kingae ATCC 23330]
          Length = 637

 Score =  688 bits (1774), Expect = 0.0,   Method: Composition-based stats.
 Identities = 297/644 (46%), Positives = 435/644 (67%), Gaps = 17/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +T PDGS++ +    T + +AESI   LAK  VA  +NG + D  DP+ ++ +++II
Sbjct: 1   MLNITLPDGSVRQYESPVTVAQIAESIGAGLAKATVAGKVNGALVDACDPITQDSTVQII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TP+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A I
Sbjct: 61  TPKDQEGVEIIRHSCAHLVGHAVKQLFPTAKMVIGPVIEEGFYYDILPEKPFTPEDMAAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-ENVTLYRQGEWFD 181
           E++M+++I +D   +K+     +  E+F+S+ E YK+ +++ +    + + +Y   E+ D
Sbjct: 121 EERMKQLINQDYDVIKKMTPRAEVVEIFKSRGEEYKLRLIDDMDDSIQAMGMYFHQEYVD 180

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           +CRGPHV +T  +K F KL K++GAYWRGDSN   L RIYGTAW  + EL  Y+  +EE+
Sbjct: 181 MCRGPHVPNTRFLKHF-KLTKMSGAYWRGDSNNEQLQRIYGTAWANKDELKAYITRIEEA 239

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
           EKRDHRKL +++DLFH+ ++  G++FWH +GW ++Q +  +MRR++ +  Y+E+ TPQV+
Sbjct: 240 EKRDHRKLGKQLDLFHLQDEAPGMVFWHPRGWALWQVIEQHMRRELTEAGYQEVKTPQVM 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D+  W++SGHW +Y+ NMF       T  + R +A+KPMNCPGHV +FNHGL+SYR+LP+
Sbjct: 300 DKTFWEKSGHWANYKDNMFL------TSSEKREYAVKPMNCPGHVQIFNHGLRSYRDLPM 353

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLAEFGS +RNEPSG+LHGLMRVRGF QDDAH+FCT++Q+  E    + L++ IY+ FGF
Sbjct: 354 RLAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIAEETKAFNLLVMKIYQQFGF 413

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           + + +KLS RPEKR GS+ +WD AE  ++  L          +    L GEGAFYGPK E
Sbjct: 414 KNVSIKLSLRPEKRAGSEEIWDKAEQGLRDALTACG------VEWEELPGEGAFYGPKVE 467

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           Y +KDA+GR WQCGTIQ+DF LP R  A YV   + K  PVM+HRA+ GS+ERFIGI+IE
Sbjct: 468 YHIKDALGRSWQCGTIQLDFVLPERLEAEYVAEDNTKKRPVMLHRAILGSLERFIGILIE 527

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              G+ PLWL+P+Q +V  IT    +YA+E+   L++    ++ D RNE I YKIR +S 
Sbjct: 528 EHAGSFPLWLAPVQMVVMNITEKQADYAKEVQAKLQAAGFRVDLDIRNEKIGYKIRSNSE 587

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            + P  +  GDKE     + IR+        VS+ + I +L  E
Sbjct: 588 MRYPYQLTVGDKEMENGQVSIRKKADN-LGSVSVDEFIAMLQDE 630


>gi|162147243|ref|YP_001601704.1| threonyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
 gi|209544293|ref|YP_002276522.1| threonyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
 gi|189083610|sp|A9HFP5|SYT_GLUDA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|161785820|emb|CAP55391.1| Threonyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
 gi|209531970|gb|ACI51907.1| threonyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
          Length = 641

 Score =  688 bits (1774), Expect = 0.0,   Method: Composition-based stats.
 Identities = 326/654 (49%), Positives = 448/654 (68%), Gaps = 15/654 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP+   +T PDGS++ F    TG+ VAESI   LA+ A+A+ ++G + DLS  +  + S+
Sbjct: 1   MPA---ITLPDGSVRRFDGPVTGTMVAESIGPGLARAALAMEVDGALVDLSREIADDASV 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
             IT +D  +L +IRH  AH++AEAVQS+WP  QV IGP IE+GFYYDF + +PF+ ++ 
Sbjct: 58  RFITRKDDAALEMIRHDTAHVLAEAVQSLWPGTQVTIGPSIENGFYYDFYRNEPFTPEDF 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IE +M+EI+A ++ F ++    ++A   FE++ E +K E++  +P  E +++YRQGEW
Sbjct: 118 PAIEARMREIVAANARFEREVWPRDEAIRFFENRGERFKAELIRDLPESEPISIYRQGEW 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPH+R T  V   FKLMKVAGAYWRGD   PML+RIYGTAW  Q+EL  +L+ LE
Sbjct: 178 LDLCRGPHLRGTADVGSAFKLMKVAGAYWRGDHRNPMLTRIYGTAWRDQKELDAHLHRLE 237

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQ 298
           E+E+RDHR++ REMDLFHI E+  G IFWH KGW+++  L  YMRR      Y+E+ TPQ
Sbjct: 238 EAERRDHRRIGREMDLFHIQEEAVGSIFWHPKGWRLYTALQDYMRRAQTRGGYQEVRTPQ 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D+ LW+ SGHWD YR +MF     D+     +T ALKPMNCP HV +F HGL+SYREL
Sbjct: 298 LVDRALWEASGHWDKYREHMFIATVEDED----KTLALKPMNCPCHVQIFRHGLRSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG+ +R EPSG+LHG+MRVR FTQDDAH+FCT+ Q+  E  +   ++  +Y D 
Sbjct: 354 PLRMAEFGACHRYEPSGALHGIMRVRSFTQDDAHIFCTESQIAAETARFVRMLAEVYADL 413

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE   VK + RPE+R GSD  WD AE  +      I+      +      GEGAFYGPK
Sbjct: 414 GFESFRVKFADRPEQRAGSDETWDRAEGAL------IEACRLAGVEYEYNPGEGAFYGPK 467

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E++L+DAIGRDWQCGT+QVD+ LP R +A +V   S +  PVM+HRA+ GS ERF+GI+
Sbjct: 468 LEFVLRDAIGRDWQCGTLQVDYVLPERLDASFVGEDSARHRPVMLHRAILGSFERFLGIL 527

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE   G  PLWL+P+Q +V +I + A  YA+++A  L    L +ETD RNE IN K+REH
Sbjct: 528 IEQHAGRFPLWLAPVQVVVASIVTDAAPYAEQVAETLTQAGLVVETDIRNEKINAKVREH 587

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           S+ ++P+I++ G KEA + ++ IRR G    + +SL DA   L  E+LPPD ++
Sbjct: 588 SLARVPVILVVGRKEAEDGTVAIRRLGGAAQEVMSLADAATALAAEALPPDLRR 641


>gi|304317243|ref|YP_003852388.1| threonyl-tRNA synthetase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302778745|gb|ADL69304.1| threonyl-tRNA synthetase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 634

 Score =  688 bits (1774), Expect = 0.0,   Method: Composition-based stats.
 Identities = 287/642 (44%), Positives = 410/642 (63%), Gaps = 16/642 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K+   DG+ K F       ++A+S+S+  AK+AV    NGK+ +L  P+  +G +EI+T
Sbjct: 1   MKIILKDGTEKEFENGKNVYEIAKSLSQRFAKEAVGGKFNGKIVELFTPINEDGKLEILT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D     +  H+ +HIMA+A++ ++ +V++ IGP I++GFYYDFD ++PF+ D+ ++IE
Sbjct: 61  FDDEDGKKIYWHTSSHIMAQAIKRLYKDVKLTIGPAIDNGFYYDFDVDEPFTVDDFSKIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           ++M +II  D    +  L  E+A +  + K E YKVE+++ +P    ++ YRQGE+ DLC
Sbjct: 121 EEMNKIIKEDLKLERFVLPREEAIKFMDEKGEPYKVELIKDLPEDAVISFYRQGEFTDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+ STG VK   KL+ VAGAYWRGD +  ML RIYG ++  +  L +YL  LEE++K
Sbjct: 181 AGPHLPSTGMVKSI-KLLSVAGAYWRGDEHNKMLQRIYGISFPKKSMLDEYLNMLEEAKK 239

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQ 302
           RDHRKL +E+DLF I  +G G  F+H KG  I   L  + R++  K  Y EI TP +L++
Sbjct: 240 RDHRKLGKELDLFSIHNEGPGFPFFHPKGMVIRNILEDFWRKEHAKRGYLEIKTPIILNE 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW +SGHWD Y+ NM+  K       D   +A+KPMNCPG + V+N  + SYR+LP+RL
Sbjct: 300 ELWHRSGHWDHYKENMYFTKI------DGEDYAIKPMNCPGALLVYNSTMHSYRDLPLRL 353

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            E G V+R+E SG+LHGLMRVR FTQDDAH+F T +Q+ +E L +  LI   YK FGF+ 
Sbjct: 354 CELGLVHRHELSGALHGLMRVRSFTQDDAHLFMTPDQVESEILGVIKLIDYFYKIFGFDY 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +GSD  W+ A N +   ++ I       ++  V  G+GAFYGPK ++ 
Sbjct: 414 F-VELSTRPENSIGSDEDWELATNALIKAMEHIG------LDYKVNEGDGAFYGPKIDFH 466

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LKD+IGR WQCGTIQ+DF +P RFN  YV    EK  PVM+HR VFGSIERFI I+ ENF
Sbjct: 467 LKDSIGRTWQCGTIQLDFQMPERFNCEYVGQDGEKHRPVMLHRVVFGSIERFIAILTENF 526

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P+Q  +  I+   + YAQ I   L  + + +E D RNE I YKIRE  ++K
Sbjct: 527 AGAFPTWLAPVQVRILPISDKHLAYAQNIQQRLLENDIRVELDDRNEKIGYKIREAQMQK 586

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IP ++I GDKE    ++ +R          S+ + +  + +E
Sbjct: 587 IPYMLILGDKEVESGNVSVRSRKDGDIGSKSMQEFLSSILEE 628


>gi|237801015|ref|ZP_04589476.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331023872|gb|EGI03929.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 640

 Score =  688 bits (1774), Expect = 0.0,   Method: Composition-based stats.
 Identities = 302/645 (46%), Positives = 435/645 (67%), Gaps = 18/645 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS ++F    + +DVA SI   LAK  VA  ++GK+ D  D +  + S+
Sbjct: 1   MP---TITLPDGSQRSFDHAVSVADVALSIGAGLAKATVAGKVDGKLVDACDLIENDASL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           +IITP+D   L +IRHSCAH++  AV+ ++P  ++ IGP+I+DGFYYD   E+PF+ D++
Sbjct: 58  QIITPKDQEGLEIIRHSCAHLVGHAVKQLYPTAKMVIGPVIDDGFYYDIAYERPFTPDDM 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A IE++MQ++I +D   +K+     +  E+F ++ E YK+ ++E +P ++ + LY   E+
Sbjct: 118 AAIEQRMQQLIEKDYDVIKKVTPRAEVIEVFTARHEDYKLRLVEDMPNEQAMGLYYHEEY 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            D+CRGPHV +T  +K F KL K++GAYWRGD+    L RIYGTAW  +++L  Y+  +E
Sbjct: 178 VDMCRGPHVPNTRFLKSF-KLTKLSGAYWRGDAKNEQLQRIYGTAWADKKQLAAYILRIE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+EKRDHRK+ + + LFH  E+  G++FWH +GW ++Q L  YMR+ + ++ Y EI TPQ
Sbjct: 237 EAEKRDHRKIGKRLGLFHTQEEAPGMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHW +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYREL
Sbjct: 297 VVDRSLWEKSGHWANYADNMFT------TESENRDYAIKPMNCPCHVQVFNQGLKSYREL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFG+ +RNEPSG+LHG+MRVRGFTQDDAH+FCT++QM  E      L + +Y DF
Sbjct: 351 PMRLAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEDQMQAESAAFIKLTLDVYADF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+ I +KLSTRPEKRVGSD LWD AE+ +   LD+        +   +  GEGAFYGPK
Sbjct: 411 GFKDIELKLSTRPEKRVGSDELWDRAESALASALDSAG------LPYDLQPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD +GR WQCGT+Q+DFNLP R NA YV+  + + +PVM+HRA+ GS ERFIGI+
Sbjct: 465 IEFSLKDCLGRVWQCGTLQLDFNLPIRLNAEYVSEDNSRKNPVMLHRAILGSFERFIGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+++G  P WL+P QA++  IT    ++A E+   L       ++D RNE I +KIREH
Sbjct: 525 IEHYEGAFPAWLAPTQAVIMNITDKQADFALEVEKTLAESGFRAKSDLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           ++ K+P +++ GD+E   +++ +R         + +      L +
Sbjct: 585 TLLKVPYLLVIGDREVEMQTVAVRTREGADLGSMPVAQFAEFLAQ 629


>gi|156974364|ref|YP_001445271.1| threonyl-tRNA synthetase [Vibrio harveyi ATCC BAA-1116]
 gi|166225516|sp|A7N009|SYT_VIBHB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|156525958|gb|ABU71044.1| hypothetical protein VIBHAR_02079 [Vibrio harveyi ATCC BAA-1116]
          Length = 642

 Score =  688 bits (1774), Expect = 0.0,   Method: Composition-based stats.
 Identities = 296/642 (46%), Positives = 426/642 (66%), Gaps = 17/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  +VA+SI   LAK  +A  +NG   D  D +  + S+EIIT +
Sbjct: 4   ITLPDGSQRQFDNPVSTMEVAQSIGPGLAKATIAGRVNGNRVDACDLIEEDASLEIITVK 63

Query: 66  DP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  A++ ++P+ ++AIGP I++GFYYD D ++  + D+L +IEK
Sbjct: 64  DEVDGLEIVRHSCAHLLGHALKQLYPQAKMAIGPTIDNGFYYDIDLDESLTQDDLEKIEK 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLC 183
           +M+E+       +K+ +S ++AR+ FES+ E YKVEIL E++   +   LY   E+ D+C
Sbjct: 124 RMKELAKTKYEVVKKKVSWQEARDTFESRGEPYKVEILDENVSRDDRPGLYHHEEYIDMC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV + G  + F  +  VAGAYWRG+S+  ML RIYGTA++ ++ L  +L  LEE+ K
Sbjct: 184 RGPHVPNMGFCQHFTLM-NVAGAYWRGNSDNKMLQRIYGTAFHDKKALKAHLTRLEEAAK 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +++DLFH+ ++  G++FWH  GW IF+ L  ++R K+ +  Y+E+  P ++D+
Sbjct: 243 RDHRKLGKQLDLFHMQQEAPGMVFWHHNGWSIFRDLEVFVRSKLDEYGYQEVKGPLIMDR 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y   MF       T  + R +ALKPMNCPGHV +FN GLKSYR+LP+R+
Sbjct: 303 VLWERSGHWDKYADAMFT------TSSENREYALKPMNCPGHVQIFNQGLKSYRDLPLRM 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHG+MRVRGFTQDDAH+FCT+ Q+  E      ++   Y+ FGF+ 
Sbjct: 357 AEFGSCHRNEPSGALHGIMRVRGFTQDDAHIFCTESQIQEEVTNCIKMVYDTYQTFGFDN 416

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+VKLSTRPEKRVGSD +WD +E  +K  L++++      I   +  GEGAFYGPK E+ 
Sbjct: 417 IVVKLSTRPEKRVGSDEIWDQSEEALKQSLESME------IPYEIQEGEGAFYGPKIEFT 470

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D + R WQCGT+Q+DFNLP R  A YV  ++E+  PVMIHRA+ GS+ERFIGI+IE +
Sbjct: 471 LYDCLDRAWQCGTVQLDFNLPGRLGATYVGENNERLVPVMIHRAILGSLERFIGILIEEY 530

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P Q I+  IT    +Y QE+   L+   +  + D RNE I +KIREH++K+
Sbjct: 531 AGFFPTWLAPEQVILMNITDKQSDYVQEVVQKLQKSGIRAKADLRNEKIGFKIREHTLKR 590

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P +++ GD+E     I +R        K  + D I  +  E
Sbjct: 591 VPYMLVVGDQEMEAGEIAVRTRKGKDLGKFKVDDFIAYIQDE 632


>gi|105892737|gb|ABF75902.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Burkholderia
           cenocepacia AU 1054]
 gi|116647586|gb|ABK08227.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Burkholderia
           cenocepacia HI2424]
          Length = 618

 Score =  687 bits (1773), Expect = 0.0,   Method: Composition-based stats.
 Identities = 306/625 (48%), Positives = 430/625 (68%), Gaps = 15/625 (2%)

Query: 22  TGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIRHSCAHI 80
           T ++VA SI   LAK A+   ++G++ D S  + R+ S+ I+T +D   L +IRHS AH+
Sbjct: 2   TVAEVAASIGPGLAKAALGGKLDGELVDTSTVIDRDASLAIVTDKDADGLDIIRHSTAHL 61

Query: 81  MAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQY 140
           +A AV+ ++P+ QV IGP+I++GFYYDF   +PF+ ++L +IEK+MQE+  +D P  ++ 
Sbjct: 62  LAYAVKELYPDAQVTIGPVIDNGFYYDFSYNRPFTPEDLEKIEKRMQELAKKDEPVTRRV 121

Query: 141 LSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKL 200
           +S ++A   F S  E YK EI+ESIP  + + LY  G + DLCRGPHV STG++K F KL
Sbjct: 122 VSRDEAAGYFRSIGEKYKAEIIESIPQSDEIKLYSHGGFTDLCRGPHVPSTGKLKVF-KL 180

Query: 201 MKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAE 260
           MKVAGAYWRGDS    L RIYGTAW  +++  QYL+ LEE+EKRDHRKL +++DLFH+ E
Sbjct: 181 MKVAGAYWRGDSKNEQLQRIYGTAWTKKEDQDQYLHMLEEAEKRDHRKLGKQLDLFHMQE 240

Query: 261 DGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMF 319
           +  G++FWH KGW ++Q +  YMRR++ +  Y EI TP ++D+ LW+ SGHW +YR NMF
Sbjct: 241 ESPGMVFWHPKGWALWQQVEQYMRRRVNEAGYLEIKTPMIMDRSLWEASGHWQNYRENMF 300

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHG 379
                  T  + R +A+KPMNCPGHV VF HGL+SYR+LP+R AEFGS +RNE SG+LHG
Sbjct: 301 T------TESEKRDYAIKPMNCPGHVQVFKHGLRSYRDLPLRYAEFGSCHRNEASGALHG 354

Query: 380 LMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDA 439
           LMRVRGF QDDAH+FCT++Q  +E +  + L +S+YKDFGF+ I +KLS RP++R G+D 
Sbjct: 355 LMRVRGFVQDDAHIFCTEDQFISESIAFNTLAMSVYKDFGFDHIDIKLSLRPDQRAGTDE 414

Query: 440 LWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVD 499
            WD AE  ++  L          +    L GEGAFYGPK EY +KDA+GR WQCGT+Q+D
Sbjct: 415 TWDRAEQGLRDALTACG------LTWEELPGEGAFYGPKIEYHIKDALGRSWQCGTLQLD 468

Query: 500 FNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTT 559
             LP R  A YV   + +  PVM+HRA+ GS+ERF+GI+IE+  G +P+WL+P QAIV  
Sbjct: 469 MVLPERLGAEYVAEDNSRRRPVMLHRAIVGSMERFLGILIEHHAGAMPVWLAPYQAIVLN 528

Query: 560 ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSI 619
           I  S  EYAQ +   L+   + +  D RNE I+YKIREH+++K+P +++ GDKE   +++
Sbjct: 529 IAESQAEYAQSLTQTLQKQGVRVAADLRNEKISYKIREHTLEKVPYLLVVGDKERDAQTV 588

Query: 620 GIRRFGSTTTQKVSLLDAIPILTKE 644
            +R  G      + +   +  L ++
Sbjct: 589 AVRARGGVDLGVMPVEAFVERLQED 613


>gi|17546296|ref|NP_519698.1| threonyl-tRNA synthetase [Ralstonia solanacearum GMI1000]
 gi|22654118|sp|Q8XZ29|SYT_RALSO RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|17428593|emb|CAD15279.1| probable threonyl-trna synthetase (threonine--trna ligase) protein
           [Ralstonia solanacearum GMI1000]
          Length = 635

 Score =  687 bits (1773), Expect = 0.0,   Method: Composition-based stats.
 Identities = 320/643 (49%), Positives = 437/643 (67%), Gaps = 15/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEII 62
            I +T PDGS + FP   T ++VA+SI   LAK A+A  I+G++ D S  + +   + I+
Sbjct: 1   MIAITLPDGSRREFPGPVTVAEVAQSIGAGLAKAALAGRIDGQLVDTSFRIEQNVDLAIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   L VIRHS AH++A AV+ ++PE QV IGP+IE+GFYYDF  ++PF+ ++L  I
Sbjct: 61  TDKDTDGLDVIRHSTAHLLAYAVKELYPEAQVTIGPVIENGFYYDFAYKRPFTPEDLVAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M E+  +D    ++  S + A +LFE   E YK EI+ SIP  + + LYR+G + DL
Sbjct: 121 EKRMAELAKKDEKVTREVWSRDDAVKLFEGMGEKYKAEIIASIPEDQEIGLYREGNFVDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG++K F KLMKVAGAYWRGDSN  ML RIYGTAW  +++   YL+ LEE+E
Sbjct: 181 CRGPHVPSTGKLKVF-KLMKVAGAYWRGDSNNEMLQRIYGTAWAKKEDQEAYLHMLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLD 301
           KRDHRKL + +DLFH+ E+  G++FWH KGW+I+Q +  YMR R     Y E+ TPQV+D
Sbjct: 240 KRDHRKLGKLLDLFHLQEEAPGMVFWHPKGWQIWQAVEQYMRGRLAGAGYSEVRTPQVMD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW++SGHW++Y+ NMF       T  + R +A+KPMNCPGHV +FNHGL+SYR+LP+R
Sbjct: 300 RGLWERSGHWENYKENMFV------TESEKREYAIKPMNCPGHVQIFNHGLRSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFG+ +RNEPSG+LHGLMRVRGF QDDAH+FCT+ Q+  E    ++L  SIY+DFGFE
Sbjct: 354 LAEFGACHRNEPSGALHGLMRVRGFVQDDAHIFCTEGQIMAEAKDFNDLAFSIYEDFGFE 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + VKL+ RP+KR G+D +WD AE  ++  L          +    L GEGAFYGPK EY
Sbjct: 414 NVAVKLALRPDKRAGTDEIWDHAEEGLRTALRACG------VEWEELPGEGAFYGPKVEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDAIGR WQCGT+Q+D  LP R  A YV   + +  PVM+HRA+ GS ERF+GI++EN
Sbjct: 468 HIKDAIGRSWQCGTLQLDLVLPERLGAEYVAEDNSRKRPVMLHRAILGSFERFLGILLEN 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G LPLWL+P Q ++ +I  +  EYA+ +A  L+        D RNE I YKIREHS++
Sbjct: 528 HAGALPLWLAPEQVVIMSIADAHAEYAESVAQSLQKQGFRASADLRNEKITYKIREHSLQ 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K+P +++ GDKE     + +R  G+     + +   +  L  +
Sbjct: 588 KVPYLVVVGDKERDGNQVAVRARGNVDLGSMPVSTFVERLQND 630


>gi|295092070|emb|CBK78177.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Clostridium cf.
           saccharolyticum K10]
          Length = 650

 Score =  687 bits (1773), Expect = 0.0,   Method: Composition-based stats.
 Identities = 280/652 (42%), Positives = 409/652 (62%), Gaps = 15/652 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
           +++K+T  DGS+K +    +  D+A+ +S  LA+ A A  ++G+V DL   + ++  + I
Sbjct: 6   TEMKITLKDGSVKEYASAMSVLDIAKDLSEGLARAACAGEMDGEVVDLRTVIDKDCQLNI 65

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +T  D + LA +RH+ +H+MA+AV+ ++P+ ++AIGP I DGFYYD D   P +++++ +
Sbjct: 66  LTARDEKGLAALRHTASHVMAQAVKRLYPDTKLAIGPSIADGFYYDVDPASPMTAEDMGK 125

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE +M++I+  + P  +  L  E+A    + K+E YKVE++E +P    ++ YRQGE+ D
Sbjct: 126 IEAEMKKIVKENLPIERFTLPREEAIAFMKEKEEPYKVELIEDLPEGAEISFYRQGEFVD 185

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LC GPH+ ST  V K +KL+ +AGAYWRG     ML+RIY TA+  ++EL  Y+  +EE+
Sbjct: 186 LCAGPHLMSTKDVGKAYKLLNLAGAYWRGSEKNKMLTRIYATAFFKKEELEAYITMMEEA 245

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           +KRDHRKL +E+ LF + + G G  F+  KG ++  TL+ Y R    K  Y EI+TP +L
Sbjct: 246 KKRDHRKLGKELGLFMMHDAGPGFPFFLPKGMQLKNTLLDYWREIHKKAGYVEISTPIIL 305

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ LW+ SGHWD Y+ NM+       T+ D   +A+KPMNCPG V V+    +SYR+LP+
Sbjct: 306 NRSLWETSGHWDHYKNNMYT------TVIDEEDYAIKPMNCPGGVLVYASEPRSYRDLPL 359

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+ E G V+R+E SG LHGLMRVR FTQDDAH+F T EQ+ +E   +  LI  +Y  FGF
Sbjct: 360 RMGELGLVHRHEKSGQLHGLMRVRCFTQDDAHIFMTPEQIKDEIKGVATLINQVYTLFGF 419

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           +   V+LSTRPE  +GSD  W+ A   ++  LD +       +   V  G+GAFYGPK +
Sbjct: 420 KYH-VELSTRPEDSMGSDEDWELATEGLRSALDELG------LPYVVNEGDGAFYGPKID 472

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           + L+D IGR WQCGTIQ+DF LP RF   Y  +  EK  P+MIHR VFGSIERFIGI+IE
Sbjct: 473 FHLEDCIGRTWQCGTIQLDFQLPQRFELEYTGADGEKHRPIMIHRVVFGSIERFIGILIE 532

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +F G  P WL+P+Q  V  I+    +YA ++   L    +  E D R+E I YKIRE   
Sbjct: 533 HFAGAFPTWLAPVQVKVLPISDKYADYAAKVYESLSEAGIRAEVDTRSEKIGYKIREAQT 592

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
            KIP +++ G KE  E ++ +R   +      SL   I  + KE    + +K
Sbjct: 593 NKIPYMLVVGQKEEEEGTVSVRSRFAGDEGASSLESFIEKIQKEIASKEMRK 644


>gi|317491930|ref|ZP_07950364.1| threonyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316920051|gb|EFV41376.1| threonyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 645

 Score =  687 bits (1773), Expect = 0.0,   Method: Composition-based stats.
 Identities = 296/647 (45%), Positives = 431/647 (66%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS + F    +  D+A  I   LAK  +A  +NG++ D  DP+  + ++
Sbjct: 1   MPV---ITLPDGSQRQFDKPVSVMDIAMDIGPGLAKACIAGRVNGELVDACDPITVDANV 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L +IRHSCAH++  A++ +WP  ++AIGP+I++GFYYD D +   + ++L
Sbjct: 58  SIITAKDQEGLEIIRHSCAHLLGHAIKQLWPNTKMAIGPVIDNGFYYDVDLDHTLTQEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             ++K+M E+  +D   +K+ +S ++AR+ FE+++E YKV IL E+I   +   LY   E
Sbjct: 118 ELLDKRMHELADKDYDVIKKKVSWQEARDTFEARQEPYKVAILDENISHDDQPGLYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KL K +GAYWRGDSN  +L RIYGTAW  +++L  YL  L
Sbjct: 178 YVDMCRGPHVPNMRFCHHF-KLQKSSGAYWRGDSNNTVLQRIYGTAWADKKQLNAYLQRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF+ L +++R K+K+ DY+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEAFVRVKLKEYDYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW+++GHW++Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 297 FMMDRVLWEKTGHWENYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+ EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  
Sbjct: 351 LPLRMGEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDEVNSCIKMVYDMYSI 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI VKLSTRPEKR+GSD +WD AE  +   L       ++ I      GEGAFYGP
Sbjct: 411 FGFEKIAVKLSTRPEKRIGSDEIWDRAEEDLAEALK------ENGIPFEYQPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF+LP R NA YV  ++E+  PVMIHRA+ GS+ERFIGI
Sbjct: 465 KIEFTLHDCLDRAWQCGTVQLDFSLPGRLNASYVGENNERLVPVMIHRAILGSMERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E + G  P WL+P+Q  V  IT +  +Y  E+   L++  +  ++D RNE I +KIRE
Sbjct: 525 LTEEYAGFYPTWLAPVQVQVMNITDAQADYVDELTKKLQAAGIRAKSDLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H+++++P +++CGDKE     + +R         + + + I  L KE
Sbjct: 585 HTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGTMDVNEVIEKLQKE 631


>gi|167040680|ref|YP_001663665.1| threonyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|307724045|ref|YP_003903796.1| threonyl-tRNA synthetase [Thermoanaerobacter sp. X513]
 gi|166854920|gb|ABY93329.1| threonyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|307581106|gb|ADN54505.1| threonyl-tRNA synthetase [Thermoanaerobacter sp. X513]
          Length = 634

 Score =  687 bits (1773), Expect = 0.0,   Method: Composition-based stats.
 Identities = 291/640 (45%), Positives = 411/640 (64%), Gaps = 16/640 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +   DG+ + F    T  ++A+SIS  LAK+AV    NGKV +L+  +  +G +EI+T +
Sbjct: 3   IILKDGTQREFEKGMTVYEIAKSISERLAKEAVGGKFNGKVVELNTKIEEDGKLEILTFD 62

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D     +  H+ +HI+A+AV+ ++ +V++AIGP I++GFYYDFD ++PF++++   IE++
Sbjct: 63  DEEGKKIYWHTSSHILAQAVKRLFKDVKLAIGPAIDNGFYYDFDTDRPFTTEDFEAIEQE 122

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M +II  D    +  L  ++A +L E K E YKVE++E IP  E ++ Y+QGE+ DLC G
Sbjct: 123 MNKIIKEDYKLERFVLPKDEAIKLMEEKGEPYKVELIEEIPEGEEISFYKQGEFTDLCAG 182

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PH+ STG VK   KL+ VAGAYW+GD    ML RIYG ++  +  L QYL+ LEE++KRD
Sbjct: 183 PHLMSTGMVKTI-KLLSVAGAYWKGDEKNKMLQRIYGISFPKKSMLDQYLHMLEEAKKRD 241

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHL 304
           HRKL +E+DLF I  +G G  F+H KG  I   L  + R   IK  Y+EI TP +L++ L
Sbjct: 242 HRKLGKELDLFSIHPEGPGFPFFHPKGMIIRNILEDFWRKEHIKHGYQEIKTPIILNEEL 301

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHWD Y+ NM+       T  D  T+A+KPMNCPG + V+   + SYR+LP+RL E
Sbjct: 302 WRRSGHWDHYKENMYF------TEIDGETYAIKPMNCPGAMLVYKSTMHSYRDLPLRLCE 355

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
            G V+R+E SG LHGLMRVR FTQDDAH+F T EQ+ +E L + NL+   YK FGFE   
Sbjct: 356 LGLVHRHELSGVLHGLMRVRSFTQDDAHLFMTPEQVEDEILGVINLVDYFYKIFGFEYF- 414

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           V+LSTRPE  +GSD  W+ A N +   L+ +       +   V  G+GAFYGPK ++ LK
Sbjct: 415 VELSTRPENSMGSDEDWELATNALISALNRVN------LPYKVNEGDGAFYGPKIDFHLK 468

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D+IGR WQCGTIQ+DF +P RF   Y+    EK  P+M+HR ++GSIERFIGI+ E+F G
Sbjct: 469 DSIGRTWQCGTIQLDFQMPERFELEYIGPDGEKHRPIMLHRVIYGSIERFIGILTEHFAG 528

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P WL+P+Q  V  I+     YAQ +   L  + +  E D RNE + YKIRE  ++KIP
Sbjct: 529 AFPTWLAPVQVRVLPISDKHYAYAQNVYGRLLENDIRAELDDRNEKVGYKIREAQLQKIP 588

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            ++I GDKE  + ++ +R         +SL + I  + KE
Sbjct: 589 YMLIVGDKEVEQGTVSLRSRKEGDLGAISLSEFIEKILKE 628


>gi|302187613|ref|ZP_07264286.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. syringae 642]
          Length = 640

 Score =  687 bits (1773), Expect = 0.0,   Method: Composition-based stats.
 Identities = 300/645 (46%), Positives = 435/645 (67%), Gaps = 18/645 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS ++F    + +DVA SI   LAK  VA  ++GK+ D  D +  + S+
Sbjct: 1   MP---TITLPDGSQRSFDHAVSVADVALSIGAGLAKATVAGKVDGKLVDACDLIENDASL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           +IITP+D   L +IRHSCAH++  AV+ ++P  ++ IGP+I+DGFYYD   E+PF+ D++
Sbjct: 58  QIITPKDQEGLEIIRHSCAHLVGHAVKQLYPTAKMVIGPVIDDGFYYDIAYERPFTPDDM 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A IE++MQ++I +D   +K+     +  E+F ++ E YK+ ++E +P ++ + LY   E+
Sbjct: 118 AAIEQRMQQLIEKDYDVIKKVTPRAEVIEVFTARHEDYKLRLVEDMPNEQAMGLYYHEEY 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            D+CRGPHV +T  +K F KL K++GAYWRGD+    L R+YGTAW  +++L  Y+  +E
Sbjct: 178 VDMCRGPHVPNTRFLKSF-KLTKLSGAYWRGDAKNEQLQRVYGTAWADKKQLAAYIQRIE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+EKRDHRK+ + + LFH  E+  G++FWH +GW ++Q L  YMR+ + ++ Y EI TPQ
Sbjct: 237 EAEKRDHRKIGKRLGLFHTQEEAPGMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHW +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYREL
Sbjct: 297 VVDRSLWEKSGHWANYADNMFT------TESESRDYAIKPMNCPCHVQVFNQGLKSYREL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFG+ +RNEPSG+LHG+MRVRGFTQDDAH+FCT++QM  E      L + +Y DF
Sbjct: 351 PMRLAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEDQMQAESAAFIKLTLDVYADF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+ I +KLSTRPEKRVGSD LWD AE+ +   LD+        +   +  GEGAFYGPK
Sbjct: 411 GFKDIELKLSTRPEKRVGSDELWDRAESALASALDSAG------LPYDLQPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD +GR WQCGT+Q+DFNLP R +A YV+  + + +PVM+HRA+ GS ERFIGI+
Sbjct: 465 IEFSLKDCLGRVWQCGTLQLDFNLPIRLSAEYVSEDNSRKNPVMLHRAILGSFERFIGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+++G  P WL+P QA++  IT    ++A E+   L       ++D RNE I +KIREH
Sbjct: 525 IEHYEGAFPAWLAPTQAVIMNITDKQADFALEVEKTLAESGFRAKSDLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           ++ K+P +++ GD+E   +++ +R         + +      L +
Sbjct: 585 TLLKVPYLLVIGDREVEMQTVAVRTREGADLGSMPVAQFAEFLAQ 629


>gi|90407011|ref|ZP_01215201.1| threonyl-tRNA synthetase [Psychromonas sp. CNPT3]
 gi|90311882|gb|EAS39977.1| threonyl-tRNA synthetase [Psychromonas sp. CNPT3]
          Length = 635

 Score =  687 bits (1773), Expect = 0.0,   Method: Composition-based stats.
 Identities = 294/640 (45%), Positives = 421/640 (65%), Gaps = 15/640 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDG+ + +    +  ++A  I   LAK  +A  +NG + D  D +  +  I IIT +
Sbjct: 4   ITLPDGNQRQYDNSTSILEIAADIGPGLAKACIAGRVNGTLVDACDVITTDADIAIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L ++RHSCAH++  A++ ++P  ++AIGP I++GFYYD D +   + +ELA+IEK+
Sbjct: 64  DDEGLEILRHSCAHLLGHAIKQLYPNAKMAIGPTIDNGFYYDIDVDVAINDEELAKIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M  ++  +   +K+ +S  +A  LF+ + E YK+EILE I   +   LY   E+ D+CRG
Sbjct: 124 MNLLVKTNYKVVKKNVSVAEAIALFKERDEPYKLEILEGIDKDDRPGLYHHEEYIDMCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV    +  ++FKLMKVAGAYWRG+S+  ML RIYGTAW  +++L  YL  LEE+ KRD
Sbjct: 184 PHVP-MMKFSQYFKLMKVAGAYWRGNSDNKMLQRIYGTAWADKKQLKAYLKRLEEAAKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHL 304
           HRK+ +++DL+H+ ++  G++FWH  GW I++ L  Y+R + ++  Y+E+  PQ+LD+ L
Sbjct: 243 HRKIGKQLDLYHMQDEAPGMVFWHANGWTIYRELEKYIREQTEEYGYQEVKAPQILDRSL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHW  Y+ NMF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R++E
Sbjct: 303 WEKSGHWAKYKDNMF------CTCSENRDYAIKPMNCPGHVQIFNQGLKSYRDLPLRMSE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNEPSGSLHGLMRVR FTQDDAH+FCT+ Q+ +E      ++   YK FGFE I 
Sbjct: 357 FGSCHRNEPSGSLHGLMRVRAFTQDDAHIFCTEAQILDEVSSCIKMVFECYKTFGFENID 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           VKLSTRPE+RVG DA WD AE  +   L      +++ +    L GEGAFYGPK E+ L 
Sbjct: 417 VKLSTRPEQRVGDDATWDKAEAALADAL------TKNDVEFSWLPGEGAFYGPKIEFTLH 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D +GR WQCGTIQ+DF++P R +A +V   +E+  PVMIHRA+ GS+ER+IGI+ E + G
Sbjct: 471 DCLGRAWQCGTIQLDFSMPGRLDATFVGEDNERHTPVMIHRAILGSLERWIGILTEEYAG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P WLSP Q +V  IT    EY  E+   LK   + + +D RNE I +KIREH++K++P
Sbjct: 531 IFPTWLSPQQVVVMNITDKQSEYVAEVVTKLKKSGIRVISDLRNEKIGFKIREHTLKRVP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            +++ GDKE   R + IR        K  + D I  + +E
Sbjct: 591 YLLVVGDKEVEARELSIRTRKGDDLGKFKIDDFITYIKEE 630


>gi|26989188|ref|NP_744613.1| threonyl-tRNA synthetase [Pseudomonas putida KT2440]
 gi|38258320|sp|Q88K27|SYT_PSEPK RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|24984027|gb|AAN68077.1|AE016439_12 threonyl-tRNA synthetase [Pseudomonas putida KT2440]
 gi|313499446|gb|ADR60812.1| ThrS [Pseudomonas putida BIRD-1]
          Length = 640

 Score =  687 bits (1773), Expect = 0.0,   Method: Composition-based stats.
 Identities = 289/645 (44%), Positives = 432/645 (66%), Gaps = 18/645 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP    +T PDGS ++F    + ++VA SI   LAK  VA  ++GK+ D  D +  + ++
Sbjct: 1   MPV---ITLPDGSQRSFDHAVSVAEVAASIGAGLAKATVAGKVDGKLVDACDLISNDATL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           +IITP+D   L +IRHSCAH++  AV+ ++P  ++ IGP+I++GFYYD   E+PF+ +++
Sbjct: 58  QIITPKDEEGLEIIRHSCAHLVGHAVKQLYPTAKMVIGPVIDEGFYYDIAYERPFTPEDM 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A IEK+M E+I +D   +K+     +  ++F+++ E YK+ ++E +P ++ + LY   E+
Sbjct: 118 AAIEKRMMELIEKDYDVVKKMTPRAEVIDVFKARGEDYKLRLVEDMPDEQAMGLYYHEEY 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            D+CRGPHV +T  +K F KL K++GAYWRGD+    L R+YGTAW  +++L  Y+  +E
Sbjct: 178 VDMCRGPHVPNTRFLKAF-KLTKLSGAYWRGDAKNEQLQRVYGTAWADKKQLAAYIQRIE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+EKRDHRK+ +++DLFH+ E+  G++FWH  GW ++Q L  YMR  + ++ Y+EI TPQ
Sbjct: 237 EAEKRDHRKIGKQLDLFHLQEEAPGMVFWHANGWTVYQVLEQYMRGVQRENGYQEIKTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHW +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYR+L
Sbjct: 297 VVDRILWERSGHWSNYAENMFT------TSSESRDYAVKPMNCPCHVQVFNQGLKSYRDL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFG+ +RNEPSG+LHG+MRVRGF QDDAH+FCT++Q+  E      L + +YKDF
Sbjct: 351 PLRLAEFGACHRNEPSGALHGIMRVRGFVQDDAHIFCTEDQVKKEAADFIKLTLDVYKDF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF  I +KLSTRP KRVGS+ LWD AE  +   L+      +  +      GEGAFYGPK
Sbjct: 411 GFSDIAMKLSTRPAKRVGSEELWDRAETALADALN------ESGLEWEYQPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ L+D +GR+WQCGT+Q D NLP R +A Y+   + +  PVM+HRA+ GS ERFIG++
Sbjct: 465 IEFTLRDCLGRNWQCGTLQYDPNLPERLDASYIAEDNSRVRPVMLHRAILGSFERFIGML 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE++ G  P WL+P QA++  IT    ++A E+   L       ++D RNE I +KIREH
Sbjct: 525 IEHYAGVFPAWLAPTQAVIMNITDKQADFALEVEKSLNGSGFRAKSDLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           ++ K+P +++ GD+E   +++ +R         + +   + +LT+
Sbjct: 585 TLLKVPYLLVIGDREVETQTVAVRTREGADLGSMPVAQFVELLTQ 629


>gi|330994118|ref|ZP_08318046.1| Threonyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1]
 gi|329758585|gb|EGG75101.1| Threonyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1]
          Length = 644

 Score =  687 bits (1772), Expect = 0.0,   Method: Composition-based stats.
 Identities = 333/654 (50%), Positives = 461/654 (70%), Gaps = 15/654 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP+   +T PDGS++ F    TG+ VA+SI   LA+ A+A+ ++GK+ D+   V  +  +
Sbjct: 1   MPA---ITLPDGSVRRFDGAVTGTTVAQSIGAGLARAALAMEVDGKLMDIGRAVDHDAHV 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
             IT +DP +L +IRH  AH++AEAVQS++P  QV IGP IE+GFYYDF + +PFS ++ 
Sbjct: 58  RFITRKDPEALEMIRHDAAHVLAEAVQSLFPGTQVTIGPSIENGFYYDFYRNEPFSPEDF 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A IEK+M EI+A + PF+++    EKA E FE + E +K E++  +P  E +++YRQGEW
Sbjct: 118 AAIEKRMAEIVAANEPFVREAWPREKAIEFFEDRGERFKAELIRDLPEDEEISIYRQGEW 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPH+R T  V   FKLMKVAGAYWRGD   PML+RIYGTAW  ++EL  +L+ LE
Sbjct: 178 LDLCRGPHLRGTADVGTAFKLMKVAGAYWRGDHRNPMLTRIYGTAWRDRKELEAHLHQLE 237

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+E+RDHR++ REMDLFHI E+  G IFWH KGW+++  L  YMRR + ++ Y+E+ TPQ
Sbjct: 238 EAERRDHRRIGREMDLFHIQEEAVGQIFWHPKGWRLYSVLQDYMRRAQDRNGYQEVRTPQ 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D+ LW+ SGHWD YR +MF     D+     +T ALKPMNCP HV +F HGL+SYREL
Sbjct: 298 LVDRALWEASGHWDKYREHMFIATVEDED----KTLALKPMNCPCHVQIFRHGLRSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG+ +R EPSG+LHG+MRVRGFTQDDAH+FCT++Q+ +E  +   ++  +Y+D 
Sbjct: 354 PLRMAEFGACHRYEPSGALHGIMRVRGFTQDDAHIFCTEDQIADETARFVRMLADVYQDL 413

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE   VK + RPE+R G DA WD AEN +K   D         +      GEGAFYGPK
Sbjct: 414 GFEHFRVKFADRPEQRAGDDATWDRAENALKVACDMAG------VTYEHNPGEGAFYGPK 467

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E++L+DAIGRDWQCGT+QVD+ LP R +A YV   S +  PVM+HRA+ GS ERF+GI+
Sbjct: 468 LEFVLRDAIGRDWQCGTLQVDYVLPERLDASYVGEDSARHRPVMLHRAILGSFERFLGIL 527

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE   G  PLWL+P+Q +V +I + A +YAQ++A+ L++  L +E D RNE IN KIREH
Sbjct: 528 IEQHAGRFPLWLAPVQVVVASIVTDAADYAQQVADRLRAAGLVVEADLRNEKINAKIREH 587

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           S+ ++P+I++ G KEA E ++ +RR G    + + L +A+  L  E+LPPD ++
Sbjct: 588 SLARVPVILVVGRKEAEENTVAMRRLGGKAQEVLPLDEAVSALAYEALPPDIRR 641


>gi|227498537|ref|ZP_03928681.1| conserved hypothetical protein [Acidaminococcus sp. D21]
 gi|226903993|gb|EEH89911.1| conserved hypothetical protein [Acidaminococcus sp. D21]
          Length = 636

 Score =  687 bits (1772), Expect = 0.0,   Method: Composition-based stats.
 Identities = 273/644 (42%), Positives = 405/644 (62%), Gaps = 16/644 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
           + I ++ PDGS + F    +  D+A+S+++ L K A+   ++G   DL+D + R+ ++E 
Sbjct: 2   AKINVSLPDGSKREFEAGISLLDIAKSLNQKLGKTALLAKVDGVNKDLADSLDRDAAVEF 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           ITP+ P  L  IRH+ +H+MA+A+Q ++P  + AIGP IE GFYYD D E  F+ D+L  
Sbjct: 62  ITPDSPEGLHAIRHTASHVMAQAIQHLFPGTKFAIGPAIEKGFYYDLDSEHVFTPDDLKA 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK+M +I+ ++ P ++  +   +A   F+++ E YKVE++E +P    ++ Y QG++ D
Sbjct: 122 IEKEMAKIVKQNLPVVRHEIPRAEALAKFKAENEPYKVELIEDLPEDAVISTYSQGDFTD 181

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LC GPH  STG+VK F KLM +AGAYWRGD    ML RIYGTA+ ++++L  YL+ LEE+
Sbjct: 182 LCAGPHCPSTGRVKAF-KLMSIAGAYWRGDEKNKMLQRIYGTAFASKEDLEAYLHMLEEA 240

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           EKRDHRKL +++ LF +++ G G  F+   G  +   LI+Y R    K +Y E++TP ++
Sbjct: 241 EKRDHRKLGKQLGLFMLSDYGPGFPFFLPNGMILRNELINYWREVHRKYNYYEVSTPMIM 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ LW+ SGHWD Y+ NM+  K       D   +A+KPMNCPG + V++    SYR+LP+
Sbjct: 301 NRQLWETSGHWDHYKENMYFTKI------DGEDYAIKPMNCPGGMLVYDSEPHSYRDLPL 354

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+ E G V+R+E SG+LHGL RVR FTQDDAH+F    Q+ +   +   L   +Y  FG 
Sbjct: 355 RVGELGLVHRHELSGALHGLFRVRCFTQDDAHIFMMPNQIEDVIQETIRLFDEVYATFGL 414

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
                +LSTRP+  +G DA W+   N ++  +D         +   V  G+GAFYGPK +
Sbjct: 415 TYHA-ELSTRPDNSMGDDATWEMTTNALRKAMDDFG------LKYVVNEGDGAFYGPKID 467

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           + LKD+IGR WQCGTIQ+D  LP +FN  Y     +K  PVMIHR V+GSIERFIGI+IE
Sbjct: 468 FHLKDSIGRTWQCGTIQLDMLLPEKFNLTYTGEDGQKHRPVMIHRVVYGSIERFIGILIE 527

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           N+ G  P WL+P Q  V  IT    EYA+ + + +++  +    D RNE I YKIRE  +
Sbjct: 528 NYAGAFPAWLAPEQVRVMPITDKFNEYAKSVVDKMEALGIRAHLDDRNEKIGYKIREGQV 587

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KK+P +++ G+KEA+  ++ +R         +++ + I  L KE
Sbjct: 588 KKVPYMLVVGEKEATNGTVSVRSRSEGEMGAMAVDEFIAKLQKE 631


>gi|256751279|ref|ZP_05492159.1| threonyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
 gi|256749834|gb|EEU62858.1| threonyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
          Length = 634

 Score =  687 bits (1772), Expect = 0.0,   Method: Composition-based stats.
 Identities = 289/640 (45%), Positives = 411/640 (64%), Gaps = 16/640 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +   DG+ + F    T  ++A+SIS  LAK+AV    NGKV +L+  +  +G +EI+T +
Sbjct: 3   IILKDGTQREFEKGMTVYEIAKSISERLAKEAVGGKFNGKVVELNTKIEEDGKLEILTFD 62

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D     +  H+ +HI+A+AV+ ++ +V++AIGP I++GFYYDFD ++PF++++   IE++
Sbjct: 63  DEEGKKIYWHTSSHILAQAVKRLFKDVKLAIGPAIDNGFYYDFDTDRPFTTEDFEAIEQE 122

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M +II  D    +  L  ++A +L E K E YKVE++E IP  E ++ Y+QGE+ DLC G
Sbjct: 123 MNKIIKEDYKLERFVLPKDEAIKLMEEKGEPYKVELIEEIPEGEEISFYKQGEFTDLCAG 182

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PH+ STG VK   KL+ VAGAYW+GD    ML RIYG ++  +  L +YL+ LEE++KRD
Sbjct: 183 PHLMSTGMVKTI-KLLSVAGAYWKGDEKNKMLQRIYGISFPKKSMLDEYLHMLEEAKKRD 241

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHL 304
           HRKL +E+DLF I  +G G  F+H KG  I   L  + R   +K  Y+EI TP +L++ L
Sbjct: 242 HRKLGKELDLFSIHPEGPGFPFFHPKGMIIRNILEDFWRKEHMKHGYQEIKTPIILNEEL 301

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHWD Y+ NM+       T  D  T+A+KPMNCPG + V+   + SYR+LP+RL E
Sbjct: 302 WRRSGHWDHYKENMYF------TEIDGETYAIKPMNCPGAMLVYKSTMHSYRDLPLRLCE 355

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
            G V+R+E SG LHGLMRVR FTQDDAH+F T EQ+ +E L + NL+   YK FGFE   
Sbjct: 356 LGLVHRHELSGVLHGLMRVRSFTQDDAHLFMTPEQVEDEILGVINLVDYFYKIFGFEYF- 414

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           V+LSTRPE  +GSD  W+ A N +   L+ +       +   V  G+GAFYGPK ++ LK
Sbjct: 415 VELSTRPENSMGSDEDWELATNALISALNRVN------LPYKVNEGDGAFYGPKIDFHLK 468

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D+IGR WQCGTIQ+DF +P RF   Y+    EK  P+M+HR ++GSIERFIGI+ E+F G
Sbjct: 469 DSIGRTWQCGTIQLDFQMPERFELEYIGPDGEKHRPIMLHRVIYGSIERFIGILTEHFAG 528

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P WL+P+Q  V  I+     YAQ +   L  + +  E D RNE + YKIRE  ++KIP
Sbjct: 529 AFPTWLAPVQVRVLPISDKHYAYAQNVYGRLLENDIRAELDDRNEKVGYKIREAQLQKIP 588

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            ++I GDKE  + ++ +R         +SL + I  + KE
Sbjct: 589 YMLIVGDKEVEQGTVSLRSRKEGDLGAISLNEFIEKILKE 628


>gi|148358548|ref|YP_001249755.1| threonyl tRNA synthase [Legionella pneumophila str. Corby]
 gi|296108363|ref|YP_003620064.1| threonyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
 gi|166223351|sp|A5IAK9|SYT_LEGPC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|148280321|gb|ABQ54409.1| threonyl tRNA synthase [Legionella pneumophila str. Corby]
 gi|295650265|gb|ADG26112.1| threonyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
          Length = 637

 Score =  687 bits (1772), Expect = 0.0,   Method: Composition-based stats.
 Identities = 315/648 (48%), Positives = 434/648 (66%), Gaps = 18/648 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP    +  PDG++K+F    T  DVA  IS  LAK A+A  ++G + D S  +  + S+
Sbjct: 1   MP---NVKLPDGNVKHFEAPLTIYDVAHHISPGLAKAAIAGRVDGVLVDTSYLIKEDCSL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            I+T +   SL +IRHS AH++A+AV++++P  QV IGP+IEDGFYYDF  E+ F+ D+L
Sbjct: 58  IIVTEKHEDSLEIIRHSTAHLLAQAVKALFPSAQVTIGPVIEDGFYYDFAFERSFTPDDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           + IE KM E+   +    ++ L   +A + F+S  E YK +I+  IP  E ++LYRQG++
Sbjct: 118 SLIEAKMHELAKANLSITRRELPRNEAIQYFKSLGEEYKAKIIADIPENEALSLYRQGDF 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV STG +K F KL KVAGAYWRGDSN  ML RIYGTAW  ++ L +YL+ LE
Sbjct: 178 EDLCRGPHVPSTGFLKAF-KLTKVAGAYWRGDSNNEMLQRIYGTAWADKKSLEEYLFRLE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+EKRDHRKL + +DLFH  +   G++FWH KGW I+Q L  YMR ++ D  Y+EI TPQ
Sbjct: 237 EAEKRDHRKLGKALDLFHFQDIAPGMVFWHPKGWTIYQELEHYMRNRLVDFGYQEIRTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D+ LW++SGHW ++R  MF       T  + R +A+KPM+CP HV ++NHGLKSYR+L
Sbjct: 297 LVDRSLWEKSGHWANFRDEMFV------TETENRHYAVKPMSCPCHVQIYNHGLKSYRDL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RL+EFG+ +R EPSG+LHGLMRVR   QDDAH+FCT++Q+ +E   +  L+ S+YKDF
Sbjct: 351 PLRLSEFGNCHRCEPSGALHGLMRVRNMVQDDAHIFCTEDQIQSEVAMMLELVQSVYKDF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF +I  +L+ RPEKRVGSD +WD AE  +K  +          I      GEGAFYGPK
Sbjct: 411 GFTEIKYRLALRPEKRVGSDDVWDKAETALKLAMQ------GRNIEWVDAPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E  L D +GR WQCGTIQVDF++P+R  A YV     K  PVM+HRA+ GS ERF+GI+
Sbjct: 465 IECSLSDCLGRIWQCGTIQVDFSMPARLEASYVAEDGSKQTPVMLHRAILGSFERFMGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE++ G LPLWLSP+QA+V TI+    EYA+++   L+   +    D RNE I +KIREH
Sbjct: 525 IEHYAGKLPLWLSPVQAVVLTISEKQNEYAEKVRKTLQKRGIRANFDLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           +++KIP +++ GDKE     + +R         +++      LT+E +
Sbjct: 585 TLQKIPYLLVVGDKEVENCQVAVRTRDGIDLGVMTIDTICDTLTQEII 632


>gi|167766936|ref|ZP_02438989.1| hypothetical protein CLOSS21_01453 [Clostridium sp. SS2/1]
 gi|167710911|gb|EDS21490.1| hypothetical protein CLOSS21_01453 [Clostridium sp. SS2/1]
          Length = 645

 Score =  687 bits (1772), Expect = 0.0,   Method: Composition-based stats.
 Identities = 275/646 (42%), Positives = 412/646 (63%), Gaps = 16/646 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M   +K+T  DGS+K +  + +  D+A+ IS  LA+ A A  ++G+V DL   + ++  +
Sbjct: 1   MNKKMKITLKDGSVKEYENNMSVIDIAKDISEGLARVACAGEVDGEVVDLRTVIDKDCEL 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            I+T +        RH+ +HI+A+AV+ ++PE ++AIGP I++GFYYD +K+ PF+ ++L
Sbjct: 61  NILTFDSDEGKHAFRHTASHILAQAVKRLYPETKLAIGPSIDNGFYYDMEKDTPFTQEDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IEK+M++I+  +          ++A    + + E YKVE++E +P    ++ Y+QGE+
Sbjct: 121 EKIEKEMKKIVKENLEITSFTKPRDEAIAFMKERNEPYKVELIEDLPEDSVISFYQQGEF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLC GPH+ +T  VK F KL  +AGAYWRGD +  ML+RIYGTA+  + EL  YL  +E
Sbjct: 181 VDLCAGPHLMTTKPVKAF-KLTSIAGAYWRGDEHNQMLTRIYGTAFTKKAELDAYLTMME 239

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+ KRDHRKL +E+ LF + E+G G  F+  KG  +  TL+ Y R    K  Y EI+TP 
Sbjct: 240 EARKRDHRKLGKELGLFMMREEGPGFPFFLPKGMVLKNTLLDYWREIHQKAGYVEISTPI 299

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +HLW+ SGHWD Y+ NM+       T+ D + FA+KPMNCPG V V++   +SYR+L
Sbjct: 300 MLSRHLWETSGHWDHYKENMYT------TVIDDQDFAIKPMNCPGGVLVYDSEPRSYRDL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+ E G V+R+E SG LHGLMRVR FTQDDAH+F T +Q+ +E   +  LI  +Y  F
Sbjct: 354 PLRMGELGLVHRHEKSGQLHGLMRVRCFTQDDAHIFMTPDQIKDEIKGVAGLIDQVYNLF 413

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+   V+LSTRP+  +GSD  W+ A + ++  LD +       ++  V  G+GAFYGPK
Sbjct: 414 GFKYH-VELSTRPDDSMGSDEDWELATDSLRAALDDLG------LDYVVNEGDGAFYGPK 466

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++ L+D+IGR WQCGTIQ+DF LP RF+  Y  +  EK  P+MIHR  FGSIERFIGI+
Sbjct: 467 IDFHLEDSIGRTWQCGTIQLDFQLPLRFDLHYTGADGEKHRPIMIHRVAFGSIERFIGIL 526

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+F G  P WL+P+Q  V  I+   ++YA ++ + LK+  +  + D R E + YKIRE 
Sbjct: 527 IEHFAGAFPTWLAPVQVEVIPISDKHLDYANKVLDTLKAAGIRADIDTRAEKMGYKIREA 586

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            ++KIP +++ G KE    ++ +R        ++ L D +  + +E
Sbjct: 587 QLQKIPYMLVVGGKEEENEAVSVRSRFKGDEGQMKLDDFLDAIKEE 632


>gi|255320853|ref|ZP_05362027.1| threonyl-tRNA synthetase [Acinetobacter radioresistens SK82]
 gi|262380254|ref|ZP_06073409.1| threonyl-tRNA synthetase [Acinetobacter radioresistens SH164]
 gi|255302022|gb|EET81265.1| threonyl-tRNA synthetase [Acinetobacter radioresistens SK82]
 gi|262298448|gb|EEY86362.1| threonyl-tRNA synthetase [Acinetobacter radioresistens SH164]
          Length = 640

 Score =  687 bits (1772), Expect = 0.0,   Method: Composition-based stats.
 Identities = 298/638 (46%), Positives = 427/638 (66%), Gaps = 15/638 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T P+G  K F    +  DVA+SI   LAK  VA  +NG++ D SD +  + +++IITP+
Sbjct: 4   ITLPNGDQKQFDQAVSVMDVAQSIGPGLAKNTVAGRVNGQLVDASDLITEDATLQIITPK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   + +IRHSCAH++  AV+ ++PE ++ IGP+IE+GFYYD    +PF+ D++A IE++
Sbjct: 64  DEEGVEIIRHSCAHLVGHAVKQLFPEAKMVIGPVIEEGFYYDIWMPRPFTLDDMAAIEER 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+++I +D   +K+    ++    F ++ E YK+ ++  +P +  + LY   ++ D+CRG
Sbjct: 124 MKKLIDQDYDVIKKMTPRDEVIAEFTARGEEYKLRLIADMPEETQMGLYYHQDYLDMCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +T  +K F KL K++GAYWRGD+    L RIYGTAW  +++L  Y+  +EE+EKRD
Sbjct: 184 PHVPNTKFLKSF-KLTKISGAYWRGDAKNEQLQRIYGTAWADKKQLAAYIKRIEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHL 304
           HRK+ + +DLFH+ E+  G++FWH  GW I+Q L  YMR+ +  + Y EI TPQ++D  L
Sbjct: 243 HRKIGKALDLFHMQEEAPGMVFWHPNGWTIYQVLEQYMRKVQQDNGYLEIKTPQIVDFTL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGH  +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYR+LP+RLAE
Sbjct: 303 WEKSGHAANYADNMFT------THSESRNYAVKPMNCPCHVQVFNQGLKSYRDLPIRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNEPSGSLHG+MRVRGFTQDDAH+FCTKEQ+  E      L + +YKDFGFE + 
Sbjct: 357 FGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTKEQIGPEVADFIKLTLDVYKDFGFEDVQ 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +KLSTRPEKRVG DALWD AE  +   LD         +   +  GEGAFYGPK E+ LK
Sbjct: 417 MKLSTRPEKRVGDDALWDMAEKSLADALDAAG------LEWELQPGEGAFYGPKIEFSLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D +GR WQCGTIQ DFNLP R +A +V   +E+  PVM+HRA+ GS ERFIGI+IE++ G
Sbjct: 471 DCLGRVWQCGTIQCDFNLPERLDASFVTEDNERDQPVMLHRAILGSFERFIGILIEHYAG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
            +P WL+P+QA V  IT S  +  +++   LK + +   +D RNE I +KIRE ++++IP
Sbjct: 531 FMPPWLAPVQACVMNITDSQAQACEQVVAKLKENGIRAISDLRNEKIGFKIRERTLERIP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +++ GD+E  E ++ +R         +S+     ++ 
Sbjct: 591 YLLVLGDREVEEGTVNVRTRSGKNLGTMSIDAFNDLVK 628


>gi|289673298|ref|ZP_06494188.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. syringae FF5]
 gi|330898079|gb|EGH29498.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 640

 Score =  687 bits (1772), Expect = 0.0,   Method: Composition-based stats.
 Identities = 300/645 (46%), Positives = 435/645 (67%), Gaps = 18/645 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS ++F    + +DVA SI   LAK  VA  ++GK+ D  D +  + S+
Sbjct: 1   MP---TITLPDGSQRSFDHAVSVADVALSIGAGLAKATVAGKVDGKLVDACDLIENDASL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           +IITP+D   L +IRHSCAH++  AV+ ++P  ++ IGP+I+DGFYYD   E+PF+ D++
Sbjct: 58  QIITPKDQEGLEIIRHSCAHLVGHAVKQLYPTAKMVIGPVIDDGFYYDIAYERPFTPDDM 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A IE++MQ++I +D   +K+     +  E+F ++ E YK+ ++E +P ++ + LY   E+
Sbjct: 118 AAIEQRMQQLIEKDYDVIKKVTPRAEVIEVFTARHEDYKLRLVEDMPNEQAMGLYYHEEY 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            D+CRGPHV +T  +K F KL K++GAYWRGD+    L R+YGTAW  +++L  Y+  +E
Sbjct: 178 VDMCRGPHVPNTRFLKSF-KLTKLSGAYWRGDAKNEQLQRVYGTAWADKKQLAAYILRIE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+EKRDHRK+ + + LFH  E+  G++FWH +GW ++Q L  YMR+ + ++ Y EI TPQ
Sbjct: 237 EAEKRDHRKIGKRLGLFHTQEEAPGMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHW +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYREL
Sbjct: 297 VVDRSLWEKSGHWANYADNMFT------TESESRDYAIKPMNCPCHVQVFNQGLKSYREL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFG+ +RNEPSG+LHG+MRVRGFTQDDAH+FCT++QM  E      L + +Y DF
Sbjct: 351 PMRLAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEDQMQAESAAFIKLTLDVYADF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+ I +KLSTRPEKRVGSD LWD AE+ +   LD+        +   +  GEGAFYGPK
Sbjct: 411 GFKDIELKLSTRPEKRVGSDELWDRAESALASALDSAG------LPYDLQPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD +GR WQCGT+Q+DFNLP R +A YV+  + + +PVM+HRA+ GS ERFIGI+
Sbjct: 465 IEFSLKDCLGRVWQCGTLQLDFNLPIRLSAEYVSEDNSRKNPVMLHRAILGSFERFIGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+++G  P WL+P QA++  IT    ++A E+   L       ++D RNE I +KIREH
Sbjct: 525 IEHYEGAFPAWLAPTQAVIMNITDKQADFALEVEKTLAESGFRAKSDLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           ++ K+P +++ GD+E   +++ +R         + +      L +
Sbjct: 585 TLLKVPYLLVIGDREVEMQTVAVRTREGADLGSMPVAQFAEFLAQ 629


>gi|289623636|ref|ZP_06456590.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|289647146|ref|ZP_06478489.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           2250]
 gi|298486701|ref|ZP_07004758.1| Threonyl-tRNA synthetase [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
 gi|298158784|gb|EFH99847.1| Threonyl-tRNA synthetase [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
 gi|330867695|gb|EGH02404.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           0893_23]
          Length = 640

 Score =  687 bits (1772), Expect = 0.0,   Method: Composition-based stats.
 Identities = 300/645 (46%), Positives = 434/645 (67%), Gaps = 18/645 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS ++F    + +DVA SI   LAK  VA  ++GK+ D  D +  + S+
Sbjct: 1   MP---TITLPDGSQRSFDHAVSVADVALSIGAGLAKATVAGKVDGKLVDACDLIENDASL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           +IITP+D   L +IRHSCAH++  AV+ ++P  ++ IGP+I+DGFYYD   E+PF+ D++
Sbjct: 58  QIITPKDQEGLEIIRHSCAHLVGHAVKQLYPTAKMVIGPVIDDGFYYDIAYERPFTPDDM 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A IE++MQ++I +D   +K+     +  E+F ++ E YK+ ++E +P ++ + LY   E+
Sbjct: 118 AAIEQRMQQLIEKDYDVIKKVTPRAEVIEVFTARHEDYKLRLVEDMPNEQAMGLYYHEEY 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            D+CRGPHV +T  +K F KL K++GAYWRGD+    L R+YGTAW  +++L  Y+  +E
Sbjct: 178 VDMCRGPHVPNTRFLKSF-KLTKLSGAYWRGDAKNEQLQRVYGTAWADKKQLAAYIQRIE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+EKRDHRK+ + + LFH  E+  G++FWH +GW ++Q L  YMR+ + ++ Y EI TPQ
Sbjct: 237 EAEKRDHRKIGKRLGLFHTQEEAPGMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHW +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYREL
Sbjct: 297 VVDRSLWEKSGHWANYADNMFT------TESESRDYAIKPMNCPCHVQVFNQGLKSYREL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFG+ +RNEPSG+LHG+MRVRGFTQDDAH+FCT++QM  E      L + +Y DF
Sbjct: 351 PMRLAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEDQMQAESAAFIKLTLDVYADF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+ I +KLSTRPEKRVGSD LWD AE  +   LD+        +   +  GEGAFYGPK
Sbjct: 411 GFKDIELKLSTRPEKRVGSDELWDRAETALASALDSAG------LPYDLQPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD +GR WQCGT+Q+DFNLP R +A YV+  + + +PVM+HRA+ GS ERFIGI+
Sbjct: 465 IEFSLKDCLGRVWQCGTLQLDFNLPIRLSAEYVSEDNSRKNPVMLHRAILGSFERFIGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+++G  P WL+P QA++  IT    ++A E+   L       ++D RNE I +KIREH
Sbjct: 525 IEHYEGAFPAWLAPTQAVIMNITDKQADFALEVEKTLAESGFRAKSDLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           ++ K+P +++ GD+E   +++ +R         + +      L +
Sbjct: 585 TLLKVPYLLVIGDREVEMQTVAVRTREGADLGSMPVAQFAEFLAQ 629


>gi|329895719|ref|ZP_08271123.1| Threonyl-tRNA synthetase [gamma proteobacterium IMCC3088]
 gi|328922195|gb|EGG29550.1| Threonyl-tRNA synthetase [gamma proteobacterium IMCC3088]
          Length = 641

 Score =  687 bits (1772), Expect = 0.0,   Method: Composition-based stats.
 Identities = 316/646 (48%), Positives = 427/646 (66%), Gaps = 18/646 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDG+ K F    +  DVA +I   LAK A+A  ++GK  D S  +  + S+
Sbjct: 1   MPV---ITLPDGNQKTFDAPPSVYDVALAIGPGLAKAALAGVVDGKEVDTSFVIENDASL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT  D   + +IRHS AH++A AVQ ++P  QV IGP IEDGFYYDF     F++++L
Sbjct: 58  AIITDRDDAGIEIIRHSTAHLLAMAVQELYPGTQVTIGPTIEDGFYYDFATGHRFTTEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IE +M EI  RD    +  +S E A E F +  E YKV+I+E +PA E +++Y+QG W
Sbjct: 118 EKIEVRMAEIADRDLTVERLEVSREHAIEEFRNMGENYKVQIIEDLPAGEIISVYKQGPW 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV STG+++ F KL KVAGAYWRGDS   ML R+YGTAW  +++L QYL  + 
Sbjct: 178 MDLCRGPHVPSTGKLQAF-KLTKVAGAYWRGDSKNEMLQRVYGTAWANKKQLKQYLNRIA 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQ 298
           E+EKRDHR++ +++DLFH  E+  G++FWH KGW ++Q +  YMR R+ ++ Y+EI TPQ
Sbjct: 237 EAEKRDHRRIGKQLDLFHTQEEAPGMVFWHPKGWTVYQVIEQYMRNRQRQEGYKEIKTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D  LW +SGH D +  +MF +K  D      R FA+KPMNCP HV VFN GLKSYR+L
Sbjct: 297 VVDMTLWHKSGHADKFGDDMFMLKAED------REFAVKPMNCPCHVQVFNQGLKSYRDL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFGS +RNEPSGSLHG+MRVRGFTQDDAH+FCT++Q+  E  +  + +  +Y+DF
Sbjct: 351 PLRLAEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTEDQIQPEVSRFIDFLHGVYEDF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF +++ +LSTRPEKRVGS+  WD AE  +   LD         +   +L GEGAFYGPK
Sbjct: 411 GFNEVIYRLSTRPEKRVGSEEDWDRAEKALADALDA------HNLPWELLPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD IGR WQ GTIQVDF++P R +A YV     +  PVM+HRA+ GS ERFIGI+
Sbjct: 465 IEFSLKDCIGRVWQLGTIQVDFSMPGRLDAQYVAEDGARKTPVMLHRAILGSFERFIGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+F+G  P WL+P Q  V  IT    E+ Q + + L +       D RNE I +KIRE 
Sbjct: 525 IEHFEGRFPTWLAPEQVAVMNITDKQGEFTQNVVDYLNNSGFRAIADLRNEKIGFKIRER 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           ++ KIP +++ GDKE   +S+ +R         ++L D    L ++
Sbjct: 585 TLAKIPYLLVVGDKEVETQSVAVRTRDGKDLGTMTLADFAEYLRQD 630


>gi|54295556|ref|YP_127971.1| threonyl tRNA synthetase [Legionella pneumophila str. Lens]
 gi|73919803|sp|Q5WT82|SYT_LEGPL RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|53755388|emb|CAH16884.1| Threonyl tRNA synthetase [Legionella pneumophila str. Lens]
          Length = 637

 Score =  686 bits (1771), Expect = 0.0,   Method: Composition-based stats.
 Identities = 316/648 (48%), Positives = 434/648 (66%), Gaps = 18/648 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP    +  PDG++K+F    T  DVA  IS  LAK A+A  ++G + D S  +  + S+
Sbjct: 1   MP---NVKLPDGNVKHFEAPLTIYDVAHHISPGLAKAAIAGRVDGVLVDTSYLIKEDCSL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            I+T +   SL VIRHS AH++A+AV++++P  QV IGP+IEDGFYYDF  E+ F+ D+L
Sbjct: 58  IIVTEKHEDSLEVIRHSTAHLLAQAVKALFPSAQVTIGPVIEDGFYYDFAFERSFTPDDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           + IE KM E+   +    ++ L   +A + F+   E YK +I+  IP  E+++LYRQG++
Sbjct: 118 SLIEVKMHELAKANLSITRRELPRNEAIQYFKGLGEEYKAKIIADIPENESLSLYRQGDF 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV STG +K F KL KVAGAYWRGDSN  ML RIYGTAW  ++ L +YLY LE
Sbjct: 178 EDLCRGPHVPSTGFLKAF-KLTKVAGAYWRGDSNNEMLQRIYGTAWADKKSLEEYLYRLE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+EKRDHRKL + +DLFH  +   G++FWH KGW I+Q L  YMR ++ D  Y+EI TPQ
Sbjct: 237 EAEKRDHRKLGKALDLFHFQDIAPGMVFWHPKGWTIYQELEHYMRNRLVDFGYQEIRTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D+ LW++SGHW ++R  MF       T  + R +A+KPM+CP HV ++NHGLKSYR+L
Sbjct: 297 LVDRSLWEKSGHWANFRDEMFV------TETENRHYAVKPMSCPCHVQIYNHGLKSYRDL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RL+EFG+ +R EPSG+LHGLMRVR   QDDAH+FCT++Q+ +E   +  L+ S+YKDF
Sbjct: 351 PLRLSEFGNCHRCEPSGALHGLMRVRNMVQDDAHIFCTEDQIQSEVAMMLELVQSVYKDF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF +I  +L+ RPEKRVGSD +WD AE  +K  +          I      GEGAFYGPK
Sbjct: 411 GFTEIKYRLALRPEKRVGSDDVWDKAETALKLAMQ------GRNIEWVDAPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E  L D +GR WQCGTIQVDF++P+R  A YV     K  PVM+HRA+ GS ERF+GI+
Sbjct: 465 IECSLSDCLGRIWQCGTIQVDFSMPARLEASYVAEDGSKQTPVMLHRAILGSFERFMGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE++ G LPLWLSP+QA+V TI+    EYA+++   L+   +    D RNE I +KIREH
Sbjct: 525 IEHYAGKLPLWLSPVQAVVLTISEKQNEYAEKVRKTLQKRGVRANFDLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           +++KIP +++ GDKE     + +R         +++      LT+E +
Sbjct: 585 TLQKIPYLLVVGDKEVENCQVAVRTRDGIDLGVMTIDTICDTLTQEII 632


>gi|54298706|ref|YP_125075.1| threonyl-tRNA synthetase [Legionella pneumophila str. Paris]
 gi|73919801|sp|Q5X1H3|SYT_LEGPA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|53752491|emb|CAH13923.1| Threonyl tRNA synthetase [Legionella pneumophila str. Paris]
          Length = 637

 Score =  686 bits (1771), Expect = 0.0,   Method: Composition-based stats.
 Identities = 314/648 (48%), Positives = 433/648 (66%), Gaps = 18/648 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP    +  PDG++K+F    T  DVA  IS  LAK A+A  ++G + D S  +  + S+
Sbjct: 1   MP---NVKLPDGNVKHFEAPLTIYDVAHHISPGLAKAAIAGRVDGVLVDTSYLIKEDCSL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            I+T +   SL +IRHS AH++A+AV++++P  QV IGP+IEDGFYYDF  E+ F+ D+L
Sbjct: 58  IIVTEKHEDSLEIIRHSTAHLLAQAVKALFPSAQVTIGPVIEDGFYYDFAFERSFTPDDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           + IE KM E+   +    ++ L   +A + F+   E YK +I+  IP  E ++LYRQG++
Sbjct: 118 SLIEAKMHELAKANLSITRRELPRNEAIQYFKGLGEEYKAKIIADIPENEALSLYRQGDF 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV STG +K F KL KVAGAYWRGDSN  ML RIYGTAW  ++ L +YL+ LE
Sbjct: 178 EDLCRGPHVPSTGFLKAF-KLTKVAGAYWRGDSNNEMLQRIYGTAWADKKSLEEYLFRLE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+EKRDHRKL + +DLFH  +   G++FWH KGW I+Q L  YMR ++ D  Y+EI TPQ
Sbjct: 237 EAEKRDHRKLGKALDLFHFQDIAPGMVFWHPKGWTIYQELEHYMRNRLVDFGYQEIRTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D+ LW++SGHW ++R  MF       T  + R +A+KPM+CP HV ++NHGLKSYR+L
Sbjct: 297 LVDRSLWEKSGHWANFRDEMFV------TETENRHYAVKPMSCPCHVQIYNHGLKSYRDL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RL+EFG+ +R EPSG+LHGLMRVR   QDDAH+FCT++Q+ +E   +  L+ S+YKDF
Sbjct: 351 PLRLSEFGNCHRCEPSGALHGLMRVRNMVQDDAHIFCTEDQIQSEVAMMLELVQSVYKDF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF +I  +L+ RPEKRVGSD +WD AE  +K  +          I      GEGAFYGPK
Sbjct: 411 GFTEIKYRLALRPEKRVGSDDVWDKAETALKLAM------LGRNIEWVDAPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E  L D +GR WQCGTIQVDF++P+R  A YV     K  PVM+HRA+ GS ERF+GI+
Sbjct: 465 IECSLSDCLGRIWQCGTIQVDFSMPARLEASYVAEDGSKQTPVMLHRAILGSFERFMGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE++ G LPLWLSP+QA+V TI+    EYA+++   L+   +    D RNE I +KIREH
Sbjct: 525 IEHYAGKLPLWLSPVQAVVLTISEKQNEYAEKVRKTLQKRGIRANFDLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           +++KIP +++ GDKE     + +R         +++      LT+E +
Sbjct: 585 TLQKIPYLLVVGDKEVENCQVAVRTRDGIDLGVMTIDTICDTLTQEII 632


>gi|330943371|gb|EGH45740.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. pisi str. 1704B]
          Length = 640

 Score =  686 bits (1771), Expect = 0.0,   Method: Composition-based stats.
 Identities = 299/645 (46%), Positives = 434/645 (67%), Gaps = 18/645 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS ++F    + +DVA SI   LAK  VA  ++GK+ D  D +  +  +
Sbjct: 1   MP---TITLPDGSQRSFDHAVSVADVALSIGAGLAKATVAGKVDGKLVDACDLIENDACL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           +IITP+D   L +IRHSCAH++  AV+ ++P  ++ IGP+I+DGFYYD   E+PF+ D++
Sbjct: 58  QIITPKDQEGLEIIRHSCAHLVGHAVKQLYPTAKMVIGPVIDDGFYYDIAYERPFTPDDM 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A IE++MQ++I +D   +K+     +  E+F ++ E YK+ ++E +P ++ + LY   E+
Sbjct: 118 AAIEQRMQQLIEKDYDVIKKVTPRAEVIEVFTARHEDYKLRLVEDMPNEQAMGLYYHEEY 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            D+CRGPHV +T  +K F KL K++GAYWRGD+    L R+YGTAW  +++L  Y+  +E
Sbjct: 178 VDMCRGPHVPNTRFLKSF-KLTKLSGAYWRGDAKNEQLQRVYGTAWADKKQLAAYVLRIE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+EKRDHRK+ + + LFH  E+  G++FWH +GW ++Q L  YMR+ + ++ Y EI TPQ
Sbjct: 237 EAEKRDHRKIGKRLGLFHTQEEAPGMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHW +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYREL
Sbjct: 297 VVDRSLWEKSGHWANYADNMFT------TESESRDYAIKPMNCPCHVQVFNQGLKSYREL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFG+ +RNEPSG+LHG+MRVRGFTQDDAH+FCT++QM  E      L + +Y DF
Sbjct: 351 PMRLAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEDQMQAESAAFIKLTLDVYADF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+ I +KLSTRPEKRVGSD LWD AE+ +   LD+        +   +  GEGAFYGPK
Sbjct: 411 GFKDIELKLSTRPEKRVGSDELWDRAESALASALDSAG------LPYDLQPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD +GR WQCGT+Q+DFNLP R +A YV+  + + +PVM+HRA+ GS ERFIGI+
Sbjct: 465 IEFSLKDCLGRVWQCGTLQLDFNLPIRLSAEYVSEDNSRKNPVMLHRAILGSFERFIGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+++G  P WL+P QA++  IT    ++A E+   L       ++D RNE I +KIREH
Sbjct: 525 IEHYEGAFPAWLAPTQAVIMNITDKQADFALEVEKTLAESGFRAKSDLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           ++ K+P +++ GD+E   +++ +R         + +      L +
Sbjct: 585 TLLKVPYLLVIGDREVEMQTVAVRTREGADLGSMPVAQFAEFLAQ 629


>gi|73919802|sp|Q5ZS05|SYT_LEGPH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
          Length = 637

 Score =  686 bits (1771), Expect = 0.0,   Method: Composition-based stats.
 Identities = 315/648 (48%), Positives = 433/648 (66%), Gaps = 18/648 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP    +  PDG++K+F    T  DVA  IS  LAK A+A  ++G + D S  +  + S+
Sbjct: 1   MP---NVKLPDGNVKHFEAPLTIYDVAHHISPGLAKAAIAGRVDGVLVDTSYLIKEDCSL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            I+T +   SL +IRHS AH++A+AV++++P  QV IGP+IEDGFYYDF  E+ F+ D+L
Sbjct: 58  IIVTEKHEDSLEIIRHSTAHLLAQAVKALFPSAQVTIGPVIEDGFYYDFAFERSFTPDDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           + IE KM E+   +    ++ L   +A + F+   E YK +I+  IP  E ++LYRQG++
Sbjct: 118 SLIEAKMHELAKANLSITRRELPRNEAIQYFKDLGEEYKAKIIADIPENEALSLYRQGDF 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV STG +K F KL KVAGAYWRGDSN  ML RIYGTAW  ++ L +YL+ LE
Sbjct: 178 EDLCRGPHVPSTGFLKAF-KLTKVAGAYWRGDSNNEMLQRIYGTAWADKKSLEEYLFRLE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+EKRDHRKL + +DLFH  +   G++FWH KGW I+Q L  YMR ++ D  Y+EI TPQ
Sbjct: 237 EAEKRDHRKLGKALDLFHFQDIAPGMVFWHPKGWTIYQELEHYMRNRLVDFGYQEIRTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D+ LW++SGHW ++R  MF       T  + R +A+KPM+CP HV ++NHGLKSYR+L
Sbjct: 297 LVDRSLWEKSGHWANFRDEMFV------TETENRHYAVKPMSCPCHVQIYNHGLKSYRDL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RL+EFG+ +R EPSG+LHGLMRVR   QDDAH+FCT++Q+ +E   +  L+ S+YKDF
Sbjct: 351 PLRLSEFGNCHRCEPSGALHGLMRVRNMVQDDAHIFCTEDQIQSEVAMMLELVQSVYKDF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF +I  +L+ RPEKRVGSD +WD AE  +K  +          I      GEGAFYGPK
Sbjct: 411 GFTEIKYRLALRPEKRVGSDDVWDKAETALKLAMQ------GRNIEWVDAPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E  L D +GR WQCGTIQVDF++P+R  A YV     K  PVM+HRA+ GS ERF+GI+
Sbjct: 465 IECSLSDCLGRIWQCGTIQVDFSMPARLEASYVAEDGSKQTPVMLHRAILGSFERFMGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE++ G LPLWLSP+QAIV TI+    EYA+++   L+   +    D RNE I +KIREH
Sbjct: 525 IEHYAGKLPLWLSPVQAIVLTISEKQNEYAEKVRKTLQKRGIRANFDLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           +++KIP +++ GDKE     + +R         +++      LT+E +
Sbjct: 585 TLQKIPYLLVVGDKEVENCQVAVRTRDGIDLGVMTIDTICDTLTQEII 632


>gi|320324302|gb|EFW80381.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
           B076]
 gi|320328576|gb|EFW84578.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
           race 4]
 gi|330885566|gb|EGH19715.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
           race 4]
          Length = 640

 Score =  686 bits (1771), Expect = 0.0,   Method: Composition-based stats.
 Identities = 300/645 (46%), Positives = 434/645 (67%), Gaps = 18/645 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS ++F    + +DVA SI   LAK  VA  ++GK+ D  D +  + S+
Sbjct: 1   MP---TITLPDGSQRSFDHVVSVADVALSIGAGLAKATVAGKVDGKLVDACDLIENDASL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           +IITP+D   L +IRHSCAH++  AV+ ++P  ++ IGP+I+DGFYYD   E+PF+ D++
Sbjct: 58  QIITPKDQEGLEIIRHSCAHLVGHAVKQLYPTAKMVIGPVIDDGFYYDIAYERPFTPDDM 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A IE++MQ++I +D   +K+     +  E+F ++ E YK+ ++E +P ++ + LY   E+
Sbjct: 118 AAIEQRMQQLIEKDYDVIKKVTPRAEVIEVFTARHEDYKLRLVEDMPNEQAMGLYYHEEY 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            D+CRGPHV +T  +K F KL K++GAYWRGD+    L R+YGTAW  +++L  Y+  +E
Sbjct: 178 VDMCRGPHVPNTRFLKSF-KLTKLSGAYWRGDAKNEQLQRVYGTAWADKKQLAAYIQRIE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+EKRDHRK+ + + LFH  E+  G++FWH +GW ++Q L  YMR+ + ++ Y EI TPQ
Sbjct: 237 EAEKRDHRKIGKRLGLFHTQEEAPGMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHW +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYREL
Sbjct: 297 VVDRSLWEKSGHWANYADNMFT------TESESRDYAIKPMNCPCHVQVFNQGLKSYREL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFG+ +RNEPSG+LHG+MRVRGFTQDDAH+FCT++QM  E      L + +Y DF
Sbjct: 351 PMRLAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEDQMQAESAAFIKLTLDVYADF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+ I +KLSTRPEKRVGSD LWD AE  +   LD+        +   +  GEGAFYGPK
Sbjct: 411 GFKDIELKLSTRPEKRVGSDELWDRAETALASALDSAG------LPYDLQPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD +GR WQCGT+Q+DFNLP R +A YV+  + + +PVM+HRA+ GS ERFIGI+
Sbjct: 465 IEFSLKDCLGRVWQCGTLQLDFNLPIRLSAEYVSEDNSRKNPVMLHRAILGSFERFIGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+++G  P WL+P QA++  IT    ++A E+   L       ++D RNE I +KIREH
Sbjct: 525 IEHYEGAFPAWLAPTQAVIMNITDKQADFALEVEKTLAESGFRAKSDLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           ++ K+P +++ GD+E   +++ +R         + +      L +
Sbjct: 585 TLLKVPYLLVIGDREVEMQTVAVRTREGADLGSMPVAQFAEFLAQ 629


>gi|283797704|ref|ZP_06346857.1| threonine--tRNA ligase [Clostridium sp. M62/1]
 gi|291074600|gb|EFE11964.1| threonine--tRNA ligase [Clostridium sp. M62/1]
          Length = 650

 Score =  686 bits (1771), Expect = 0.0,   Method: Composition-based stats.
 Identities = 280/652 (42%), Positives = 409/652 (62%), Gaps = 15/652 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
           +++K+T  DGS+K +    +  D+A+ +S  LA+ A A  ++G+V DL   + ++  + I
Sbjct: 6   TEMKITLKDGSVKEYASAMSVLDIAKDLSEGLARAACAGEMDGEVVDLRTVIDKDCQLNI 65

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +T  D + LA +RH+ +H+MA+AV+ ++P+ ++AIGP I DGFYYD D   P + +++ +
Sbjct: 66  LTARDEKGLAALRHTASHVMAQAVKRLYPDTKLAIGPSIADGFYYDVDPASPMTVEDMGK 125

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE +M++I+  + P  +  L  E+A    + K+E YKVE++E +P    ++ YRQGE+ D
Sbjct: 126 IEAEMKKIVKENLPIERFTLPREEAIAFMKEKEEPYKVELIEDLPEGAEISFYRQGEFVD 185

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LC GPH+ ST  V K +KL+ +AGAYWRG     ML+RIY TA++ ++EL  Y+  +EE+
Sbjct: 186 LCAGPHLMSTKDVGKAYKLLNLAGAYWRGSEKNKMLTRIYATAFSKKEELEAYITMMEEA 245

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           +KRDHRKL +E+ LF + + G G  F+  KG ++  TL+ Y R    K  Y EI+TP +L
Sbjct: 246 KKRDHRKLGKELGLFMMHDAGPGFPFFLPKGMQLKNTLLDYWREIHKKAGYVEISTPIIL 305

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ LW+ SGHWD Y+ NM+       T+ D   +A+KPMNCPG V V+    +SYR+LP+
Sbjct: 306 NRSLWETSGHWDHYKNNMYT------TVIDEEDYAIKPMNCPGGVLVYASEPRSYRDLPL 359

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+ E G V+R+E SG LHGLMRVR FTQDDAH+F T EQ+ +E   +  LI  +Y  FGF
Sbjct: 360 RMGELGLVHRHEKSGQLHGLMRVRCFTQDDAHIFMTPEQIKDEIKGVATLINEVYTLFGF 419

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           +   V+LSTRPE  +GSD  W+ A   ++  LD +       +   V  G+GAFYGPK +
Sbjct: 420 KYH-VELSTRPEDSMGSDEDWELATEGLRSALDELG------LPYVVNEGDGAFYGPKID 472

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           + L+D IGR WQCGTIQ+DF LP RF   Y  +  EK  P+MIHR VFGSIERFIGI+IE
Sbjct: 473 FHLEDCIGRTWQCGTIQLDFQLPQRFELEYTGADGEKHRPIMIHRVVFGSIERFIGILIE 532

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +F G  P WL+P+Q  V  I+    +YA ++   L    +  E D R+E I YKIRE   
Sbjct: 533 HFAGAFPTWLAPVQVKVLPISDKYADYAAKVYESLSEAGIRAEVDTRSEKIGYKIREAQT 592

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
            KIP +++ G KE  E ++ +R   +      SL   I  + KE    + +K
Sbjct: 593 NKIPYMLVVGQKEEEEGTVSVRSRFAGDEGASSLESFIEKIQKEIASKEMRK 644


>gi|221066194|ref|ZP_03542299.1| threonyl-tRNA synthetase [Comamonas testosteroni KF-1]
 gi|220711217|gb|EED66585.1| threonyl-tRNA synthetase [Comamonas testosteroni KF-1]
          Length = 639

 Score =  686 bits (1771), Expect = 0.0,   Method: Composition-based stats.
 Identities = 331/650 (50%), Positives = 446/650 (68%), Gaps = 19/650 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEII 62
            I +T PDGS + +P   + ++VA SI   LAK A+A  INGKV D S  + + S + II
Sbjct: 1   MINITLPDGSKREYPGPVSVAEVAASIGSGLAKAALAGKINGKVVDTSFVIEQDSPLSII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   L VIRHS AH++A AV+ ++P+ QV IGP+IE+GFYYDF  ++PF+ ++LA I
Sbjct: 61  TAKDADGLEVIRHSTAHLLAYAVKELFPDAQVTIGPVIENGFYYDFSYKRPFTPEDLAAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EKKM E+  +D   +++ L  ++A + F+   EAYK EI+ SIP+ E+V+LYR+G + DL
Sbjct: 121 EKKMTELANKDEQVVRRVLPRDEAVQYFKGLGEAYKAEIIASIPSNEDVSLYREGAFEDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG++K F KLMKVAGAYWRGD    ML RIYGTAW T+ EL  YL+ LEE+E
Sbjct: 181 CRGPHVPSTGKLKHF-KLMKVAGAYWRGDHRNEMLQRIYGTAWATKDELKDYLFRLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD 301
           KRDHRKL RE+DLFHI E   G +FWH KGW ++Q +  YMRR  + + Y+E+  PQ+LD
Sbjct: 240 KRDHRKLGRELDLFHIDEHSPGTVFWHPKGWAVWQQVEQYMRRVYQDNGYQEVKAPQILD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+++GHWD YR NMF       T  + R +ALKPMNCPGH+ +F  G+KSYR+LP+R
Sbjct: 300 KGLWEKTGHWDKYRENMFT------TDSEKREYALKPMNCPGHIIIFKQGIKSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
             EFG+ +RNEP+GSLHG+MRVR FTQDD H+FCT++Q+  E     +L+  +Y DFGF 
Sbjct: 354 FGEFGNCHRNEPTGSLHGIMRVRAFTQDDGHIFCTEDQIQAEVTAFTSLLQKVYADFGFT 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            I+ +LSTRPEKR+G+D  WD AEN +   L               L GEGAFYGPK EY
Sbjct: 414 NILYRLSTRPEKRIGTDEAWDKAENALAEGLRASGC------EFEYLPGEGAFYGPKIEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            LKDA+GR+WQCGTIQVD N+P R +A +V    E+  P+M+HRA+ GS+ERFIGI++E+
Sbjct: 468 TLKDALGREWQCGTIQVDPNMPERLDAEFVGEDGERHRPIMLHRAILGSLERFIGILVEH 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHL----SIETDFRNETINYKIRE 597
             G LP WL+P+QA V  IT +  +YAQE+A  L+         + TD RNE I YKIRE
Sbjct: 528 HSGALPAWLAPVQAAVLNITDAQADYAQEVAQKLQKALPNQSLRVVTDLRNEKITYKIRE 587

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLP 647
           HS++K+P I++ GDKE +  ++ +R  G+     +S+   I +L K+   
Sbjct: 588 HSMQKLPYILVAGDKEKAAGAVAVRARGNKDLGVMSVDAFIELLAKDVTA 637


>gi|299533556|ref|ZP_07046932.1| threonyl-tRNA synthetase [Comamonas testosteroni S44]
 gi|298718462|gb|EFI59443.1| threonyl-tRNA synthetase [Comamonas testosteroni S44]
          Length = 639

 Score =  686 bits (1771), Expect = 0.0,   Method: Composition-based stats.
 Identities = 332/647 (51%), Positives = 446/647 (68%), Gaps = 19/647 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEII 62
            I +T PDGS + +P   + +DVA SI   LAK A+A  INGKV D S  + + S + II
Sbjct: 1   MINITLPDGSKREYPGPVSVADVAASIGSGLAKAALAGKINGKVVDTSFVIEQDSPLSII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   L VIRHS AH++A AV+ ++P+ QV IGP+IE+GFYYDF  ++PF+ ++LA I
Sbjct: 61  TAKDADGLEVIRHSTAHLLAYAVKELFPDAQVTIGPVIENGFYYDFSYKRPFTPEDLAAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EKKM E+  +D   +++ L  ++A + F+   EAYK EI+ SIP+ E+V+LYR+G + DL
Sbjct: 121 EKKMTELANKDEQVVRRVLPRDEAVQYFKGIGEAYKAEIIASIPSNEDVSLYREGAFEDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG++K F KLMKVAGAYWRGD    ML RIYGTAW T+ EL  YL+ LEE+E
Sbjct: 181 CRGPHVPSTGKLKHF-KLMKVAGAYWRGDHRNEMLQRIYGTAWATKDELKDYLFRLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD 301
           KRDHRKL RE+DLFHI E   G +FWH KGW ++Q +  YMRR  + + Y+E+  PQ+LD
Sbjct: 240 KRDHRKLGRELDLFHIDEHSPGTVFWHPKGWAVWQQVEQYMRRVYQDNGYQEVKAPQILD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+++GHWD YR NMF       T  + R +ALKPMNCPGH+ +F  G+KSYR+LP+R
Sbjct: 300 KGLWEKTGHWDKYRENMFT------TDSEKREYALKPMNCPGHIIIFKQGIKSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
             EFG+ +RNEP+GSLHG+MRVR FTQDD H+FCT++Q+  E     +L+  +Y DFGF 
Sbjct: 354 FGEFGNCHRNEPTGSLHGIMRVRAFTQDDGHIFCTEDQIQAEVTAFTSLLQKVYADFGFT 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            I+ +LSTRPEKR+G+D  WD AEN +   L               L GEGAFYGPK EY
Sbjct: 414 NILYRLSTRPEKRIGTDEAWDKAENALAEGLRASGC------EFEYLPGEGAFYGPKIEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            LKDA+GR+WQCGTIQVD N+P R +A +V    E+  P+M+HRA+ GS+ERFIGI++E+
Sbjct: 468 TLKDALGREWQCGTIQVDPNMPERLDAEFVGEDGERHRPIMLHRAILGSLERFIGILVEH 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHL----SIETDFRNETINYKIRE 597
             G LP WL+P+QA V  IT +  +YAQE+A  L+         + TD RNE I YKIRE
Sbjct: 528 HSGALPAWLAPVQAAVLNITDAQADYAQEVAQKLQKALPNQSLRVVTDLRNEKITYKIRE 587

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           HS++K+P I++ GDKE +  ++ +R  G+     +S+   I +L K+
Sbjct: 588 HSMQKLPYILVAGDKEKAAGAVAVRARGNKDLGVMSVDAFIELLAKD 634


>gi|20808138|ref|NP_623309.1| threonyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
 gi|22654110|sp|Q8R9A4|SYT_THETN RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|20516726|gb|AAM24913.1| Threonyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
          Length = 644

 Score =  686 bits (1771), Expect = 0.0,   Method: Composition-based stats.
 Identities = 293/642 (45%), Positives = 417/642 (64%), Gaps = 16/642 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           + +T  DG+ + F    T  ++A+SIS  LA++AV    NGK+ +L+  +  +G +EI+T
Sbjct: 11  MVITLRDGTKREFEKGITVYEIAKSISDKLAREAVGGKFNGKIVELNTKIEEDGELEILT 70

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            ED     +  H+ +HI+A+AV+ ++ +V++AIGP I++GFYYDFD E+PF++++   IE
Sbjct: 71  FEDEEGKKIYWHTSSHILAQAVKRLFKDVKLAIGPAIDNGFYYDFDTERPFTTEDFEAIE 130

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           ++M +II  D    +  LS E+A +  + K E YKVE++E IP  E ++ Y+QGE+ DLC
Sbjct: 131 EEMNKIIKEDYKLERFVLSKEEAIKFMKEKDEPYKVELIEEIPEGEEISFYKQGEFVDLC 190

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+ STG VK   KL+ VAGAYW+GD    ML RIYG ++  +  L +YL+ +EE++K
Sbjct: 191 AGPHLPSTGMVK-AIKLLSVAGAYWKGDEKNKMLQRIYGISFPKKSMLDEYLHMMEEAKK 249

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQ 302
           RDHRKL +E+DLF I  +G G  F+H KG  I   L  + R   IK  Y+EI TP +L++
Sbjct: 250 RDHRKLGKELDLFSIHPEGPGFPFFHPKGMIIRNILEDFWRKEHIKRGYQEIRTPIILNE 309

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y+ NM+       T  D +T+A+KPMNCPG + V+   L+SYR+LP+RL
Sbjct: 310 ELWKRSGHWDHYKENMYF------TEIDGQTYAIKPMNCPGAMLVYKSTLRSYRDLPLRL 363

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            E G V+R+E SG LHGLMRVR FTQDDAH+F T EQ+ +E L + NL+   YK FGFE 
Sbjct: 364 CELGLVHRHELSGVLHGLMRVRSFTQDDAHLFMTPEQVEDEILGVINLVDYFYKIFGFEY 423

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +G+D  W+ A N +   L          +   V  GEGAFYGPK ++ 
Sbjct: 424 H-VELSTRPENSMGTDEEWELATNALISALKRAN------LPYKVNEGEGAFYGPKIDFH 476

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LKD+IGR WQCGTIQ+DF +P RF   Y+    EK  P+M+HR ++GSIERFIGI+ E+F
Sbjct: 477 LKDSIGRTWQCGTIQLDFQMPERFELEYIGPDGEKHRPIMLHRVIYGSIERFIGILTEHF 536

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P+Q  V  I+    EYA+++   L+ H + +E D RNE I YKIRE  ++K
Sbjct: 537 AGAFPTWLAPVQVRVLPISEKHHEYARKVYERLQEHDIRVELDDRNEKIGYKIREAQLQK 596

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IP ++I GD+E  E ++ +R         +SL + I  + KE
Sbjct: 597 IPYMLIVGDREVEEGNVSLRSRKDGDLGPISLDNFIEKILKE 638


>gi|299066586|emb|CBJ37776.1| threonine tRNA synthetase [Ralstonia solanacearum CMR15]
          Length = 635

 Score =  686 bits (1771), Expect = 0.0,   Method: Composition-based stats.
 Identities = 321/643 (49%), Positives = 438/643 (68%), Gaps = 15/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEII 62
            I +T PDGS + FP   T ++VA+SI   LAK A+A  I+G++ D S  + +   + I+
Sbjct: 1   MIAITLPDGSRREFPGPVTVAEVAQSIGAGLAKAALAGRIDGQLVDTSFRIEQSVDLAIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   L VIRHS AH++A AV+ ++PE QV IGP+IE+GFYYDF  ++PF+ ++L  I
Sbjct: 61  TDKDVDGLDVIRHSTAHLLAYAVKELYPEAQVTIGPVIENGFYYDFAYKRPFTPEDLVAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M E+  +D    ++  S + A +LFE   E YK EI+ SIP  + + LYR+G + DL
Sbjct: 121 EKRMAELAKKDEKVTREVWSRDDAVKLFEGMGEKYKAEIIASIPQDQEIGLYREGNFVDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG++K F KLMKVAGAYWRGDSN  ML RIYGTAW  +++   YL+ LEE+E
Sbjct: 181 CRGPHVPSTGKLKVF-KLMKVAGAYWRGDSNNEMLQRIYGTAWAKKEDQEAYLHMLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLD 301
           KRDHRKL + +DLFH+ E+  G++FWH KGW+I+Q +  YMR R     Y E+ TPQV+D
Sbjct: 240 KRDHRKLGKVLDLFHLQEEAPGMVFWHPKGWQIWQAVEQYMRGRLAGAGYSEVRTPQVMD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW++SGHW++Y+ NMF       T  + R +A+KPMNCPGHV +FNHGL+SYR+LP+R
Sbjct: 300 RGLWERSGHWENYKENMFV------TESEKREYAIKPMNCPGHVQIFNHGLRSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFG+ +RNEPSG+LHGLMRVRGF QDDAH+FCT+ Q+  E    ++L  S+Y+DFGFE
Sbjct: 354 LAEFGACHRNEPSGALHGLMRVRGFVQDDAHIFCTEGQIMAEAKDFNDLAFSVYEDFGFE 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + VKL+ RP+KR GSD +WD AE+ ++  L          +    L GEGAFYGPK EY
Sbjct: 414 NVAVKLALRPDKRAGSDDIWDHAEDGLRTALRACG------VEWEELPGEGAFYGPKVEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDAIGR WQCGT+Q+D  LP R  A YV   + +  PVM+HRA+ GS ERF+GI++EN
Sbjct: 468 HIKDAIGRSWQCGTLQLDLVLPERLGAEYVAEDNSRKRPVMLHRAILGSFERFLGILLEN 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G LPLWL+P Q +V +I  +  EYA+ +A  L+        D RNE I YKIREHS++
Sbjct: 528 HAGALPLWLAPEQVVVMSIADAHAEYAESVAQSLQKQGFRAFADLRNEKITYKIREHSLQ 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K+P +++ GDKE     + +R  G+     + +   +  L  +
Sbjct: 588 KVPYLVVVGDKERDGNQVAVRARGNVDLGSMPVSTFVERLQND 630


>gi|218709221|ref|YP_002416842.1| threonyl-tRNA synthetase [Vibrio splendidus LGP32]
 gi|218322240|emb|CAV18357.1| Threonyl-tRNA synthetase [Vibrio splendidus LGP32]
          Length = 655

 Score =  686 bits (1770), Expect = 0.0,   Method: Composition-based stats.
 Identities = 302/642 (47%), Positives = 425/642 (66%), Gaps = 17/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  DVA SI   LAK  +A  ++G+  D  D +  + S+EIIT +
Sbjct: 17  ITLPDGSQRQFDNPVSTLDVALSIGPGLAKATIAGRVDGERVDACDLIENDASLEIITAK 76

Query: 66  DP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  A++ ++PE ++AIGP I++GFYYD D E   + ++L +IEK
Sbjct: 77  DEVDGLEIVRHSCAHLLGHAIKQLFPEAKMAIGPTIDNGFYYDIDLEHSLTQEDLEKIEK 136

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLC 183
           +M+E+       +K+ +S ++AR+ FE++ E YK+EIL E++   +   LY   E+ D+C
Sbjct: 137 RMKELAKTKYQVVKKKVSWQEARDAFEARGETYKIEILDENVSKDDRPGLYHHEEYIDMC 196

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV   G  + F  L  VAGAYWRG+S+  ML RIYGTA++ ++ L  +L  LEE+ K
Sbjct: 197 RGPHVPHMGFCQHFTLL-NVAGAYWRGNSDNKMLQRIYGTAFHDKKALKAHLVRLEEAAK 255

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRK+ + +DLFH+ ++  G++FWH  GW IF+ L  ++R+K+ + DY+E+  P ++D+
Sbjct: 256 RDHRKIGKHLDLFHMQQEAPGMVFWHHNGWTIFRELEVFIRQKLTEYDYQEVKGPLMMDR 315

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+
Sbjct: 316 VLWERSGHWDKYAEAMFT------TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRM 369

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHG+MRVRGFTQDDAHVFCT++Q+  E      ++   Y  FGFE 
Sbjct: 370 AEFGSCHRNEPSGALHGIMRVRGFTQDDAHVFCTEDQVQQEVKACIEMVYDTYTTFGFEN 429

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+VKLSTRPE+RVGSD +WD AE  +K  L+ ++      I   +  GEGAFYGPK E+ 
Sbjct: 430 IVVKLSTRPEQRVGSDEMWDRAEADLKQALEAME------IAYEIQEGEGAFYGPKIEFT 483

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D + R WQCGT+Q+DF LP R  A YV   +E+  PVMIHRA+ GS+ERFIGI+IE +
Sbjct: 484 LHDCLDRAWQCGTVQLDFALPERLGATYVGEDNERHTPVMIHRAILGSLERFIGILIEEY 543

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P QAIV  IT    EY QEIA  L+     ++ D RNE I +KIREH++K+
Sbjct: 544 AGFFPTWLAPEQAIVMGITDKQSEYVQEIAKKLQKSGFRVKADLRNEKIGFKIREHTLKR 603

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P +++CGD+E     I +R        K  + D I  +  E
Sbjct: 604 VPFMLVCGDQEMEAGEIAVRTRKGKDLGKFKVDDFISYIQAE 645


>gi|170721151|ref|YP_001748839.1| threonyl-tRNA synthetase [Pseudomonas putida W619]
 gi|229558042|sp|B1J6U4|SYT_PSEPW RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|169759154|gb|ACA72470.1| threonyl-tRNA synthetase [Pseudomonas putida W619]
          Length = 640

 Score =  686 bits (1770), Expect = 0.0,   Method: Composition-based stats.
 Identities = 287/644 (44%), Positives = 430/644 (66%), Gaps = 18/644 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS + F    + +DVA SI   LAK  VA  ++GK+ D  + +  + ++
Sbjct: 1   MP---TITLPDGSQRAFDHAVSVADVAASIGAGLAKATVAGKVDGKLVDACELITHDATL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           +IITP+D   L +IRHSCAH++  AV+ ++P  ++ IGP+I++GFYYD   E+ F+ ++L
Sbjct: 58  QIITPKDEEGLEIIRHSCAHLVGHAVKQLYPTAKMVIGPVIDEGFYYDIAYERSFTPEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A IEK+MQ++I +D   +K+     +  ++F+++ E YK+ ++E +P ++ + LY   E+
Sbjct: 118 AAIEKRMQQLIEKDYDVIKKMTPRAEVIDVFKARGEDYKLRLVEDMPDEQAMGLYYHEEY 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            D+CRGPHV +T  +K F KL K++GAYWRGD+    L R+YGTAW  +++L  Y+  +E
Sbjct: 178 VDMCRGPHVPNTRFLKAF-KLTKLSGAYWRGDAKNEQLQRVYGTAWADKKQLAAYIQRIE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+EKRDHRK+ +++DLFH+ E+  G++FWH  GW ++Q L  YMR+ + ++ Y EI TPQ
Sbjct: 237 EAEKRDHRKIGKQLDLFHLQEEAPGMVFWHANGWTVYQVLEQYMRQVQRENGYSEIKTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHW +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYR+L
Sbjct: 297 VVDRILWERSGHWSNYAENMFT------TSSESRDYAVKPMNCPCHVQVFNQGLKSYRDL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFG+ +RNEPSG+LHG+MRVRGF QDDAH+FCT++Q+  E      L + +YKDF
Sbjct: 351 PLRLAEFGACHRNEPSGALHGIMRVRGFVQDDAHIFCTEDQVKKEAADFIKLTLDVYKDF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF  + +KLSTRP KRVGS+ LWD AE  +   L+      +  +      GEGAFYGPK
Sbjct: 411 GFTDVAMKLSTRPAKRVGSEELWDRAEGALADALN------ESGLEWEYQPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ L+D +GR+WQCGT+Q D NLP R +A Y+   + +  PVM+HRA+ GS ERFIG++
Sbjct: 465 IEFTLRDCLGRNWQCGTLQYDPNLPERLDASYIAEDNARKRPVMLHRAILGSFERFIGML 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE++ G  P WL+P QA++  IT    ++A ++   L       ++D RNE I +KIREH
Sbjct: 525 IEHYAGVFPAWLAPTQAVIMNITDKQADFALQVEKSLNGSGFRAKSDLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           ++ K+P +++ GD+E   +++ +R         + +   + +LT
Sbjct: 585 TLLKVPYLLVIGDREVETQTVAVRTREGADLGSMPVAQFVELLT 628


>gi|220926910|ref|YP_002502212.1| threonyl-tRNA synthetase [Methylobacterium nodulans ORS 2060]
 gi|219951517|gb|ACL61909.1| threonyl-tRNA synthetase [Methylobacterium nodulans ORS 2060]
          Length = 670

 Score =  686 bits (1770), Expect = 0.0,   Method: Composition-based stats.
 Identities = 387/647 (59%), Positives = 495/647 (76%), Gaps = 6/647 (0%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           LTFPDG+ + +    TG  V E I++SLAK+ VA+A++G V DL D +  +  IE +   
Sbjct: 4   LTFPDGATRAYDAAVTGRAVVEGIAKSLAKRTVAMALDGTVHDLDDAITHDARIEFLDRT 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           DPR+L +IRH CAH++AEAVQS+WPE QV IGP+IE+GFYYDF +E PF+ D+ A IE +
Sbjct: 64  DPRALELIRHDCAHVLAEAVQSLWPETQVTIGPVIENGFYYDFYRETPFTPDDFAAIEAR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+EIIARD+PF K+  + +  R LF  K E++KVE++++IP  E++ +YRQGEWFDLCRG
Sbjct: 124 MREIIARDAPFTKEVWARDDVRALFADKGESFKVELVDAIPPGEDLKIYRQGEWFDLCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PH+ STG++   FKLMKVAGAYWRGDS+RPMLSRIYGTAW +Q +L  YL+ LEE+E+RD
Sbjct: 184 PHMTSTGKIGAAFKLMKVAGAYWRGDSSRPMLSRIYGTAWASQADLDAYLHRLEEAERRD 243

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHLW 305
           HR+L REMDLFH  E+G GV+FWH KGW +FQ LI+YMRR++K DY E+N PQ+LD+ LW
Sbjct: 244 HRRLGREMDLFHFQEEGPGVVFWHPKGWTLFQELIAYMRRRLKGDYREVNAPQILDKALW 303

Query: 306 QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEF 365
           + SGHWD YR NMF  K      +D R FA+KPMNCPGHV +F HGLKSYR+LP+RLAEF
Sbjct: 304 ETSGHWDWYRENMFVTK-----TEDERVFAIKPMNCPGHVQIFKHGLKSYRDLPLRLAEF 358

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
           G+V R EPSG+LHGLMRVR FTQDDAHVFCT++Q+  ECLKI++LI+S Y DFGF++I+V
Sbjct: 359 GAVSRYEPSGALHGLMRVRAFTQDDAHVFCTEDQLAAECLKINDLILSTYADFGFDEIVV 418

Query: 426 KLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKD 485
           KLSTRPEKRVGSDALWD AE +M  VL  I+  S  RI T +  GEGAFYGPKFEY+L+D
Sbjct: 419 KLSTRPEKRVGSDALWDHAEEVMTRVLAQIEEQSGGRIRTAINPGEGAFYGPKFEYVLRD 478

Query: 486 AIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           AIGRDWQCGT QVDFNLP RF AFYV++  +K  PVM+HRA+ GS+ERF GI+IE+F G+
Sbjct: 479 AIGRDWQCGTTQVDFNLPERFGAFYVDADGQKKTPVMVHRAICGSMERFAGILIEHFAGH 538

Query: 546 LPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPI 605
            PLWL+P+Q +V TITS A  YA+E+    ++  L  E D RNE INYK+REHS  K+P+
Sbjct: 539 FPLWLAPLQVVVATITSDADLYAREVLAAAEAAGLRAELDLRNEKINYKVREHSHAKVPV 598

Query: 606 IIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           +++ G +E  E ++ IRR GS  T+   L  A+  L  E+  PD ++
Sbjct: 599 MLVVGRREGEEGTVSIRRLGSQQTRTAPLDQALAELVAEATAPDWRR 645


>gi|264679166|ref|YP_003279073.1| threonyl-tRNA synthetase [Comamonas testosteroni CNB-2]
 gi|262209679|gb|ACY33777.1| threonyl-tRNA synthetase [Comamonas testosteroni CNB-2]
          Length = 687

 Score =  686 bits (1770), Expect = 0.0,   Method: Composition-based stats.
 Identities = 331/647 (51%), Positives = 446/647 (68%), Gaps = 19/647 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEII 62
            I +T PDGS + +P   + ++VA SI   LAK A+A  INGKV D S  + + S + II
Sbjct: 49  MINITLPDGSKREYPGPVSVAEVAASIGSGLAKAALAGKINGKVVDTSFVIEQDSPLSII 108

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   L VIRHS AH++A AV+ ++P+ QV IGP+IE+GFYYDF  ++PF+ ++LA I
Sbjct: 109 TAKDADGLEVIRHSTAHLLAYAVKELFPDAQVTIGPVIENGFYYDFSYKRPFTPEDLAAI 168

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EKKM E+  +D   +++ L  ++A + F+   EAYK EI+ SIP+ E+V+LYR+G + DL
Sbjct: 169 EKKMTELANKDEQVVRRVLPRDEAVQYFKGLGEAYKAEIIASIPSNEDVSLYREGAFEDL 228

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG++K F KLMKVAGAYWRGD    ML RIYGTAW T+ EL  YL+ LEE+E
Sbjct: 229 CRGPHVPSTGKLKHF-KLMKVAGAYWRGDHRNEMLQRIYGTAWATKDELKDYLFRLEEAE 287

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD 301
           KRDHRKL RE+DLFHI E   G +FWH KGW ++Q +  YMRR  + + Y+E+  PQ+LD
Sbjct: 288 KRDHRKLGRELDLFHIDEHSPGTVFWHPKGWAVWQQVEQYMRRVYQDNGYQEVKAPQILD 347

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+++GHWD YR NMF       T  + R +ALKPMNCPGH+ +F  G+KSYR+LP+R
Sbjct: 348 KGLWEKTGHWDKYRENMFT------TDSEKREYALKPMNCPGHIIIFKQGIKSYRDLPLR 401

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
             EFG+ +RNEP+GSLHG+MRVR FTQDD H+FCT++Q+  E     +L+  +Y DFGF 
Sbjct: 402 FGEFGNCHRNEPTGSLHGIMRVRAFTQDDGHIFCTEDQIQAEVTAFTSLLQKVYADFGFT 461

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            I+ +LSTRPEKR+G+D  WD AEN +   L               L GEGAFYGPK EY
Sbjct: 462 NILYRLSTRPEKRIGTDEAWDKAENALAEGLRASGC------EFEYLPGEGAFYGPKIEY 515

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            LKDA+GR+WQCGTIQVD N+P R +A +V    E+  P+M+HRA+ GS+ERFIGI++E+
Sbjct: 516 TLKDALGREWQCGTIQVDPNMPERLDAEFVGEDGERHRPIMLHRAILGSLERFIGILVEH 575

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHL----SIETDFRNETINYKIRE 597
             G LP WL+P+QA V  IT +  +YAQE+A  L+         + TD RNE I YKIRE
Sbjct: 576 HSGALPAWLAPVQAAVLNITDAQADYAQEVAQKLQKALPNQSLRVVTDLRNEKITYKIRE 635

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           HS++K+P I++ GDKE +  ++ +R  G+     +S+   I +L K+
Sbjct: 636 HSMQKLPYILVAGDKEKAAGAVAVRARGNKDLGVMSVDAFIELLAKD 682


>gi|167034477|ref|YP_001669708.1| threonyl-tRNA synthetase [Pseudomonas putida GB-1]
 gi|189083619|sp|B0KKR8|SYT_PSEPG RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|166860965|gb|ABY99372.1| threonyl-tRNA synthetase [Pseudomonas putida GB-1]
          Length = 640

 Score =  686 bits (1770), Expect = 0.0,   Method: Composition-based stats.
 Identities = 291/645 (45%), Positives = 431/645 (66%), Gaps = 18/645 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP    +T PDGS ++F    + +DVA SI   LAK  VA  ++GK+ D  D +  + ++
Sbjct: 1   MPV---ITLPDGSQRSFDHAVSVADVAASIGAGLAKATVAGKVDGKLVDACDLISNDATL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           +IITP+D   L +IRHSCAH++  AV+ ++P  ++ IGP+I++GFYYD   E+PF+ +++
Sbjct: 58  QIITPKDEEGLEIIRHSCAHLVGHAVKQLYPTAKMVIGPVIDEGFYYDIAYERPFTPEDM 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A IEK+M E+I +D   +K+     +  ++F+++ E YK+ ++E +P ++ + LY   E+
Sbjct: 118 AAIEKRMMELIEKDYDVVKKMTPRAEVIDVFKARGEDYKLRLVEDMPDEQAMGLYYHEEY 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            D+CRGPHV +T  +K F KL K++GAYWRGD+    L R+YGTAW  +++L  Y+  +E
Sbjct: 178 VDMCRGPHVPNTRFLKAF-KLTKLSGAYWRGDAKNEQLQRVYGTAWADKKQLAAYIQRIE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+EKRDHRK+ +++DLFH+ E+  G++FWH  GW ++Q L  YMR  + ++ Y+EI TPQ
Sbjct: 237 EAEKRDHRKIGKQLDLFHLQEEAPGMVFWHANGWTVYQVLEQYMRGVQRENGYQEIKTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHW +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYR+L
Sbjct: 297 VVDRILWERSGHWSNYAENMFT------TSSESRDYAVKPMNCPCHVQVFNQGLKSYRDL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFG+ +RNEPSG+LHG+MRVRGF QDDAH+FCT+EQ+  E      L + +YKDF
Sbjct: 351 PLRLAEFGACHRNEPSGALHGIMRVRGFVQDDAHIFCTEEQVKKEAADFIKLTLDVYKDF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF  I +KLSTRP KRVGS+ LWD AE  +   L+      +  +      GEGAFYGPK
Sbjct: 411 GFSDIAMKLSTRPAKRVGSEELWDRAETALADALN------ESGLEWEYQPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ L+D +GR+WQCGT+Q D NLP R +A Y+   + +  PVM+HRA+ GS ERFIG++
Sbjct: 465 IEFTLRDCLGRNWQCGTLQYDPNLPERLDASYIAEDNSRVRPVMLHRAILGSFERFIGML 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE++ G  P WL+P QA++  IT    ++A E+   L       ++D RNE I +KIREH
Sbjct: 525 IEHYAGVFPAWLAPTQAVIMNITDKQADFALEVEKSLNGSGFRAKSDLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           ++ K+P +++ GD+E   +++ +R         + +     +LT+
Sbjct: 585 TLLKVPYLLVIGDREVETQTVAVRTREGADLGSMPVAQFAELLTQ 629


>gi|169831543|ref|YP_001717525.1| threonyl-tRNA synthetase [Candidatus Desulforudis audaxviator
           MP104C]
 gi|169638387|gb|ACA59893.1| threonyl-tRNA synthetase [Candidatus Desulforudis audaxviator
           MP104C]
          Length = 635

 Score =  686 bits (1770), Expect = 0.0,   Method: Composition-based stats.
 Identities = 281/642 (43%), Positives = 403/642 (62%), Gaps = 15/642 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K+T  DG +  +P   T  +VA  I+  LAK+AV   +NG++  L+ P+  + ++E +T
Sbjct: 1   MKITLKDGKVVEYPEGVTPEEVARDIAPRLAKEAVVARVNGRLWGLNQPLVEDATLEFLT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            ED  +  V RHS +H++A+AV+ ++PE ++AIGP + DGFYYDFD  + F+ ++L +IE
Sbjct: 61  FEDEDARLVYRHSTSHVLAQAVKRLYPEARLAIGPAVTDGFYYDFDVPRTFTPEDLERIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M++IIA D P  +  LS ++A EL     E YKVE++  +   E ++ YRQGE+ DLC
Sbjct: 121 SEMEDIIAADLPIERFELSRDEALELVGGDGENYKVELISGLGPDEVISFYRQGEFTDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPHV STG++K   KL+ VAGAYWRGD    ML RIYGT++     L ++L+ LEE+++
Sbjct: 181 AGPHVPSTGRIK-AVKLLSVAGAYWRGDERNKMLQRIYGTSFPKASLLKEHLFRLEEAKR 239

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQ 302
           RDHR+L  E+DLF   E G G  F+H +G  +   L  + R +  K+ Y EI TP +L Q
Sbjct: 240 RDHRRLGFELDLFSFHEAGPGFPFFHPRGMVLRNELERFWREEHTKNGYLEIRTPIILRQ 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD YR NM+       T  D   +A+KPMNCPG + V+   L SYRELP+RL
Sbjct: 300 ELWERSGHWDHYRENMYF------TTIDDEKYAVKPMNCPGGILVYRSKLHSYRELPIRL 353

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            E G V+R+E SG LHGLMR R FTQDDAH+FC  EQ+  E ++I +L    Y+      
Sbjct: 354 GELGLVHRHELSGVLHGLMRARCFTQDDAHIFCRPEQVEEEIVRIMDLTEYFYRQVFGFD 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPEK +GSD +W+ A   ++  L+      +  +N  V  G+GAFYGPK ++ 
Sbjct: 414 YHVELSTRPEKSLGSDEIWESATAALRRALE------ERAVNYKVNEGDGAFYGPKVDFH 467

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+D +GR WQCGTIQVDF +P +F   YV    ++  PVMIHR ++GS+ERFI I+ E+F
Sbjct: 468 LRDCLGRTWQCGTIQVDFQMPEKFELEYVGEDGQRHRPVMIHRVIYGSMERFIAILTEHF 527

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P+WL+P+Q  +  IT     YAQE+   L    +  E D RNE + YKIRE  + K
Sbjct: 528 AGAFPVWLAPVQVRILPITDRHAAYAQEVTEALLRAGVRAEFDGRNEKVGYKIREAQVLK 587

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P +++ GD+EA  R++ +R   +     + L D    L +E
Sbjct: 588 VPYMLVIGDREAESRTVAVRHRTAGDLGSMELNDFTGRLVRE 629


>gi|295696884|ref|YP_003590122.1| threonyl-tRNA synthetase [Bacillus tusciae DSM 2912]
 gi|295412486|gb|ADG06978.1| threonyl-tRNA synthetase [Bacillus tusciae DSM 2912]
          Length = 641

 Score =  686 bits (1770), Expect = 0.0,   Method: Composition-based stats.
 Identities = 289/645 (44%), Positives = 432/645 (66%), Gaps = 17/645 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
             +++   DGS++ F   AT ++VA ++SRSL K AVA   NGK+ DLS PV  +G +E 
Sbjct: 7   DPVRIRLKDGSVREFQKGATLAEVAGTLSRSLGKHAVAAKWNGKLVDLSTPVQEDGEVEF 66

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +T +DP  L V RH+CAH+MA+AV  ++P  + AIGP+IEDGFYYDF  +  F+ ++L +
Sbjct: 67  VTLDDPEGLEVYRHTCAHVMAQAVSRLFPGAKFAIGPVIEDGFYYDFA-DHEFTPEDLPK 125

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE++M+ ++  D P  ++ L  ++A E+F  + + +KVEI+  +P    +T+Y QGE+ D
Sbjct: 126 IEQEMERVVKEDLPIRREVLGRDEALEMFRGRDDRFKVEIIRDLPPDAVITVYHQGEFTD 185

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ STG++K F KL+ +AGAYWRGDSNR ML+RIY TA+ TQ++L +YL  +EE+
Sbjct: 186 LCRGPHLPSTGRIKAF-KLLSLAGAYWRGDSNREMLTRIYATAFPTQRQLEEYLRRVEEA 244

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
            KRDHR++ R+++LF  A++  G+ F   KG  I   L  +MR  + + DYEE+ TP ++
Sbjct: 245 RKRDHRRVGRDLELFFFADEAPGMPFLLPKGMVIRNELERFMREFLNEYDYEEVKTPILM 304

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D+ LW++SGHWD Y+ NM+  +       D R FALKPMNCPGH   F H ++SYR+LP+
Sbjct: 305 DRVLWERSGHWDHYKENMYFTEV------DEREFALKPMNCPGHALTFKHRVRSYRDLPI 358

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AEFG ++R+E SG+LHGL+RVR FTQDDAH+F   +Q+ +E     +LI  +Y  FGF
Sbjct: 359 RMAEFGLLHRHELSGALHGLLRVREFTQDDAHLFVRPDQIQDEVFACMDLIDRVYAAFGF 418

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
               V+LSTRPE   GSD LW+ A   ++  L++        +   +  G+GAFYGPK +
Sbjct: 419 -PYRVELSTRPENSTGSDELWEAATEGLRKALES------RGLEYQINEGDGAFYGPKID 471

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           + +KD++GR  QCGTIQ+DF +P +F+  YV   +E+  PVMIHRAV GS ERF G++IE
Sbjct: 472 FHVKDSLGRSHQCGTIQLDFQMPEKFDLTYVGEDNERHRPVMIHRAVLGSFERFFGLLIE 531

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           ++ G  P+WL+P+QA V TI +  + YA+E+ +  ++  L +E D R E I YK+RE  +
Sbjct: 532 HYNGAFPVWLAPVQARVLTIGAGHLPYAKEVQSRARAMGLRVEVDGRAEKIGYKVREAQV 591

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           +KIP +++ GD+EA    + +R+ G     + S  + +  + +E+
Sbjct: 592 QKIPYMLVIGDQEAQTGEVSVRKRGQGDLGRRSAEEVLVAIAEEA 636


>gi|71735831|ref|YP_274354.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|123747652|sp|Q48JS3|SYT_PSE14 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|71556384|gb|AAZ35595.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola
           1448A]
          Length = 640

 Score =  686 bits (1770), Expect = 0.0,   Method: Composition-based stats.
 Identities = 299/645 (46%), Positives = 434/645 (67%), Gaps = 18/645 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS ++F    + +DVA SI   LAK  VA  ++GK+ D  D +  + S+
Sbjct: 1   MP---TITLPDGSQRSFDHVVSVADVALSIGAGLAKATVAGKVDGKLVDACDLIENDASL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           +IITP+D   L +IRHSCAH++  AV+ ++P  ++ IGP+I+DGFYYD   E+PF+ D++
Sbjct: 58  QIITPKDQEGLEIIRHSCAHLVGHAVKQLYPTAKMVIGPVIDDGFYYDIAYERPFTPDDM 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A IE++MQ++I +D   +K+     +  E+F ++ E YK+ ++E +P ++ + LY   E+
Sbjct: 118 AAIEQRMQQLIEKDYDVIKKVTPRAEVIEVFTARHEDYKLRLVEDMPNEQAMGLYYHEEY 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            D+CRGPHV +T  +K F KL K++GAYWRGD+    L R+YGTAW  +++L  Y+  +E
Sbjct: 178 VDMCRGPHVPNTRFLKSF-KLTKLSGAYWRGDAKNEQLQRVYGTAWADKKQLAAYIQRIE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+EKRDHRK+ + + LFH  E+  G++FWH +GW ++Q L  YMR+ + ++ Y EI TPQ
Sbjct: 237 EAEKRDHRKIGKRLGLFHTQEEAPGMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHW +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYREL
Sbjct: 297 VVDRSLWEKSGHWANYADNMFT------TESESRDYAIKPMNCPCHVQVFNQGLKSYREL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFG+ +RNEPSG+LHG+MRVRGFTQDDAH+FCT++QM  E      L + +Y DF
Sbjct: 351 PMRLAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEDQMQAESAAFIKLTLDVYADF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+ I +KLSTRPEKRVGSD LW+ AE  +   LD+        +   +  GEGAFYGPK
Sbjct: 411 GFKDIELKLSTRPEKRVGSDELWERAETALASALDSAG------LPYDLQPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD +GR WQCGT+Q+DFNLP R +A YV+  + + +PVM+HRA+ GS ERFIGI+
Sbjct: 465 IEFSLKDCLGRVWQCGTLQLDFNLPIRLSAEYVSEDNSRKNPVMLHRAILGSFERFIGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+++G  P WL+P QA++  IT    ++A E+   L       ++D RNE I +KIREH
Sbjct: 525 IEHYEGAFPAWLAPTQAVIMNITDKQADFALEVEKTLAESGFRAKSDLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           ++ K+P +++ GD+E   +++ +R         + +      L +
Sbjct: 585 TLLKVPYLLVIGDREVEMQTVAVRTREGADLGSMPVAQFAEFLAQ 629


>gi|260597637|ref|YP_003210208.1| threonyl-tRNA synthetase [Cronobacter turicensis z3032]
 gi|260216814|emb|CBA30296.1| Threonyl-tRNA synthetase [Cronobacter turicensis z3032]
          Length = 642

 Score =  686 bits (1770), Expect = 0.0,   Method: Composition-based stats.
 Identities = 300/655 (45%), Positives = 436/655 (66%), Gaps = 19/655 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D +DP+  +  +
Sbjct: 1   MPV---ITLPDGSQRHYDHAVSPMDVALDIGPGLAKACIAGRVNGELVDANDPIEQDAQL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L +IRHSCAH++  A++ +WP  ++AIGP+I++GFYYD D +   + +++
Sbjct: 58  AIITAKDEDGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVIDNGFYYDVDLDHTLTQEDI 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M E+   +   +K+ +S ++ARE F ++ E+YKV IL E+I   +   LY   E
Sbjct: 118 DALEKRMHELAETNYDVIKKKVSWQEARETFVNRGESYKVAILDENIARDDKPGLYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KLMK AGAYWRGDS+  ML RIYGTAW  ++ L  YL  L
Sbjct: 178 YVDMCRGPHVPNMRFCHHF-KLMKTAGAYWRGDSSNKMLQRIYGTAWADKKALNAYLQRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF+ L +++R K+K+  Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELETFVRSKLKEYQYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW+++GHWD+Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 297 FMMDRVLWEKTGHWDNYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSG+LHGLMRVRGFTQDDAHVFCT+EQ+ +E      ++  +Y  
Sbjct: 351 LPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHVFCTEEQVRDEVNSCIRMVYDMYST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI+VKLSTRPEKR+G+D +WD AE  +   L+      ++ I      GEGAFYGP
Sbjct: 411 FGFEKIVVKLSTRPEKRIGTDEMWDRAEADLAVALE------ENNIPFEYQPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF+LP+R +A YV  ++E+  PVMIHRA+ GS+ERFIGI
Sbjct: 465 KIEFTLYDCLDRAWQCGTVQLDFSLPARLSASYVGENNERQVPVMIHRAILGSMERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E F G  P WL+P+Q +V  IT S  EY  E+   L++  + ++ D RNE I +KIRE
Sbjct: 525 LTEEFAGFFPTWLAPVQVVVMNITDSQSEYVNELTRKLQNAGIRVKADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           H+++++P +++CGDKE     + +R         + + D I  L +E      Q+
Sbjct: 585 HTLRRVPYMLVCGDKEVEAGKVAVRTRRGKDLGSLDVNDVIEKLQQEIRSRSLQQ 639


>gi|126740677|ref|ZP_01756363.1| threonyl-tRNA synthetase [Roseobacter sp. SK209-2-6]
 gi|126718192|gb|EBA14908.1| threonyl-tRNA synthetase [Roseobacter sp. SK209-2-6]
          Length = 649

 Score =  686 bits (1770), Expect = 0.0,   Method: Composition-based stats.
 Identities = 327/652 (50%), Positives = 435/652 (66%), Gaps = 10/652 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
           + I LTFPDG+ + F    T ++VA SIS SL KKA++  +NG   DL  P+  + SI I
Sbjct: 2   AQISLTFPDGNAREFDAGVTPAEVASSISTSLGKKAISATVNGAHWDLQWPIDTDASIAI 61

Query: 62  ITPEDP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            T +D  ++  +IRH  AH+MA AVQ IWP+ +V IGP+IE+G+YYDFD+ +PF+ ++L 
Sbjct: 62  HTMKDEAQANELIRHDLAHVMARAVQEIWPDTKVTIGPVIENGWYYDFDRAEPFTPEDLG 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEKKM+EII +      +     +A   +    E YKVE++ESIP  E + +Y  G+W 
Sbjct: 122 AIEKKMKEIINKRDEVRTEVWDRPRAILHYSDNNEPYKVELIESIPGDEPLRMYWHGDWQ 181

Query: 181 DLCRGPHVRSTGQ-VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           DLCRGPH++ TGQ     FKLM +AGAYWRGDS+R ML RIYG A+  +++L  +L+ LE
Sbjct: 182 DLCRGPHLQHTGQLPGDAFKLMSIAGAYWRGDSDRAMLQRIYGVAFTGKEKLKAHLHMLE 241

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+ KRDHRKL REM+L+H+ E+  G +FWH  GWKI+ TL  YMRR + +D Y E+NTPQ
Sbjct: 242 EAAKRDHRKLGREMNLYHMQEEAPGQVFWHPNGWKIYTTLQDYMRRMQERDGYVEVNTPQ 301

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW+ SGHWD Y+ NMF V+  +D  ++    ALKPMNCP HV VFN GLKSYR+L
Sbjct: 302 VVDRKLWEASGHWDKYQENMFIVEVDEDHAREKAINALKPMNCPCHVQVFNQGLKSYRDL 361

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFGS  R EPSG+LHG+MRVRGFTQDD H+FC+++Q+ +E  K    +  +Y D 
Sbjct: 362 PLRMAEFGSCARYEPSGALHGIMRVRGFTQDDGHIFCSEDQIESETAKFIAFLSKVYADL 421

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF    +KLSTRPEKR+GSD  WD  E  +                  VL GEGAFYGPK
Sbjct: 422 GFHNWTIKLSTRPEKRIGSDESWDLVEKALGDACKAAGY------EYEVLEGEGAFYGPK 475

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ L DAIGR+WQCGT+QVD NLP R  A ++     K  P M+HRA  GS ERFIGI+
Sbjct: 476 LEFTLTDAIGRNWQCGTLQVDPNLPERLEANFIGQDGNKHRPFMLHRACLGSFERFIGIL 535

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE   G LP WL+P Q +V +ITS A +Y  E+   L++  +  E D RNE INYK+REH
Sbjct: 536 IEEHAGKLPFWLAPRQVVVASITSDADDYVNEVVETLRAAGVRAEADIRNEKINYKVREH 595

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDC 650
           S+ K+P+I+  G +E  ER++ +RR G   T+   L + +  LT+E+ PPD 
Sbjct: 596 SVGKVPVILAVGHREVEERTVSVRRLGEKQTKVEGLDETVAKLTQEATPPDL 647


>gi|315181382|gb|ADT88295.1| threonyl-tRNA synthetase [Vibrio furnissii NCTC 11218]
          Length = 642

 Score =  686 bits (1770), Expect = 0.0,   Method: Composition-based stats.
 Identities = 299/642 (46%), Positives = 429/642 (66%), Gaps = 17/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  +VA+SI   LAK  +A  ++G   D  D +  + S+EIIT +
Sbjct: 4   ITLPDGSQRQFDNPVSTLEVAQSIGPGLAKATIAGRVDGVRVDACDLIENDASLEIITAK 63

Query: 66  DP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  A++ ++P+ ++AIGP I++GFYYD D E+  S D++ +IE 
Sbjct: 64  DEVDGLEIVRHSCAHLLGHALKQLYPQAKMAIGPTIDNGFYYDIDLEESLSQDDIEKIEA 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE-SIPAKENVTLYRQGEWFDLC 183
           +M+E+       +K+ +S ++AR+ FE+++E YK+EIL+ ++   +   LY   E+ D+C
Sbjct: 124 RMKELAKTKYQVVKKKVSWQEARDTFEARQEPYKMEILDQNVARDDRPGLYHHEEYIDMC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV   G  + F KL+ VAGAYWRGDSN  ML RIYGTA++ ++ L  +L  LEE+ K
Sbjct: 184 RGPHVPHMGFCQHF-KLLNVAGAYWRGDSNNKMLQRIYGTAFHDKKALQAHLTRLEEAAK 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRK+ +++DLFH+ ++  G++FWH  GW IF+ L  ++R K+ +  Y+E+  P ++D+
Sbjct: 243 RDHRKIGKQLDLFHMQQEAPGMVFWHHNGWSIFRDLEVFIRHKLNEYGYQEVKGPLMMDR 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+
Sbjct: 303 VLWERSGHWDKYADAMFT------TSSENRDYAIKPMNCPGHVQIFNQGLKSYRDLPLRM 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSGSLHG+MRVRGFTQDDAH+FCT++Q+  E      ++   Y  FGF+ 
Sbjct: 357 AEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTEDQIQEEVTSCIKMVYDTYTTFGFDN 416

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I VKLSTRPEKRVGSD +WD +E  +K  L+ +       I   +  GEGAFYGPK E+ 
Sbjct: 417 IAVKLSTRPEKRVGSDEIWDKSEEALKHSLEAMG------IAYEIQEGEGAFYGPKIEFT 470

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D + R WQCGT+Q+DFNLP+R  A YV  ++E+  PVMIHRA+ GS+ERFIGI+IE +
Sbjct: 471 LYDCLDRAWQCGTVQLDFNLPTRLGATYVGENNERLVPVMIHRAILGSLERFIGILIEEY 530

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P QA+V  IT    +YAQE+A  L+   +  + D RNE I +KIREH++K+
Sbjct: 531 AGFFPTWLAPEQAVVVNITDKQADYAQEVAQKLQKCGIRAKADLRNEKIGFKIREHTLKR 590

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P +++CGD+E     I +R        K  L D +  +  E
Sbjct: 591 VPYMLVCGDQEMEAGEIAVRTRKGKDLGKFKLDDFVSHIQTE 632


>gi|78044971|ref|YP_360408.1| threonyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901]
 gi|123770579|sp|Q3ABS6|SYT_CARHZ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|77997086|gb|ABB15985.1| threonyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901]
          Length = 634

 Score =  686 bits (1769), Expect = 0.0,   Method: Composition-based stats.
 Identities = 305/643 (47%), Positives = 424/643 (65%), Gaps = 16/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEII 62
            I L FP+  ++ FP + T  +VA+++S  LAK+A+  +INGK+ DLS  + E G   + 
Sbjct: 1   MISLKFPNNEVREFPENITALEVAKTLSPRLAKEALCASINGKLIDLSQKISESGEFRLY 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T ED     V RHS AH+MA+AV+ ++P+ ++AIGP I+DGFYYDFD E+ FS ++L +I
Sbjct: 61  TFEDDEGKDVFRHSSAHLMAQAVKRLFPKTKLAIGPAIKDGFYYDFDPEESFSPEDLEKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M++I+  D P  +  LS ++A + FE K E YKVE+++ IP    ++ YRQGE+ DL
Sbjct: 121 EAEMEKIVKEDLPIERFVLSRDEAIKFFEEKGEIYKVELVKDIPEGVEISFYRQGEFVDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPHV STG +K F KL+ +AGAYWRG+    ML RIYG ++  +  LT YL FLEE++
Sbjct: 181 CTGPHVPSTGYLKAF-KLLNIAGAYWRGNEKNKMLQRIYGVSFPKKSMLTDYLNFLEEAK 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD 301
           KRDHRK+ +E+DLF + E+G G  F+H KG  I   L ++ R K +   Y+EI TP +L+
Sbjct: 240 KRDHRKIGQELDLFSLQEEGPGFPFFHPKGMVIRNELENFWREKHRLAGYQEIKTPIILN 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW++SGHW  Y+ NM+  K       D + +A+KPMNCPG + V+ + L SYRE P+R
Sbjct: 300 RELWERSGHWAHYKENMYFTKI------DDQDYAIKPMNCPGSILVYKNKLHSYREFPIR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAE G V+R+E SG LHGLMRVR FTQDDAH+F   EQ+ +E + + NLI   Y+ FGFE
Sbjct: 354 LAELGLVHRHELSGVLHGLMRVRCFTQDDAHIFMLPEQVKDEIIGVINLIDEFYRLFGFE 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPE  +GSD LW+ A N +K  L+      +  +   +  G+GAFYGPK ++
Sbjct: 414 YH-VELSTRPENSMGSDELWELATNSLKEALE------ERGLPYKINEGDGAFYGPKIDF 466

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            LKD +GR WQCGTIQ+DF +P +F+  Y+    +K  PVMIHR VFGSIERFIGI+IE+
Sbjct: 467 HLKDCLGRTWQCGTIQLDFQMPEKFDLTYIGEDGQKHRPVMIHRVVFGSIERFIGILIEH 526

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  P+WLSP+Q  V T+     EY QEI   L +  + +E D RNETI YKIRE  ++
Sbjct: 527 YAGAFPVWLSPVQVRVITVAERHREYGQEIYQKLFNQGVRVELDDRNETIGYKIREGQMQ 586

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIP ++I GDKE  + S+ +R+ G     +    + I  L  E
Sbjct: 587 KIPYLLIVGDKEIEQGSVAVRKRGVGDLGQKPFAEFIEELLAE 629


>gi|296102767|ref|YP_003612913.1| threonyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
 gi|295057226|gb|ADF61964.1| threonyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
          Length = 642

 Score =  686 bits (1769), Expect = 0.0,   Method: Composition-based stats.
 Identities = 300/655 (45%), Positives = 433/655 (66%), Gaps = 19/655 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS ++F    +  DVA  I   LAK  +A  +NG++ D SD +  +  +
Sbjct: 1   MPV---ITLPDGSQRHFDHAVSPMDVALDIGPGLAKATIAGRVNGELVDASDLIENDAQL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L +IRHSCAH++  A++ +WP  ++AIGP+I++GFYYD D +   + +++
Sbjct: 58  SIITAKDEEGLEIIRHSCAHLLGHAIKQLWPNTKMAIGPVIDNGFYYDVDLDHTLTQEDI 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M E+   +   +K+ +S  +ARE F  + E+YKV IL E+I   +   LY   E
Sbjct: 118 DALEKRMHELAETNYDVIKKKVSWHEARETFVKRGESYKVSILDENIAHDDKPGLYHHQE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KLMK+AGAYWRGDSN  ML RIYGTAW  ++ L  YL  L
Sbjct: 178 YIDMCRGPHVPNMRFCHHF-KLMKIAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF+ L +++R K+K+  Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELETFVRSKLKEYQYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW+++GHWD+Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 297 FMMDRVLWEKTGHWDNYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT++Q+ +E      ++  +Y  
Sbjct: 351 LPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEDQVRDEVNACIRMVYDMYST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI+VKLSTRPEKR+GSD  WD AE  +   L+      ++ I     LGEGAFYGP
Sbjct: 411 FGFEKIVVKLSTRPEKRIGSDETWDRAEADLAVALE------ENGIPFEYQLGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF+LP R +A YV   +E+  PVMIHRA+ GS+ERFIGI
Sbjct: 465 KIEFTLYDCLDRAWQCGTVQLDFSLPQRLSASYVGEDNERQVPVMIHRAILGSLERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E F G  P WL+P+Q +V  IT S  +Y +E+   L++  + ++ D RNE I +KIRE
Sbjct: 525 LTEEFAGFFPTWLAPVQVVVMNITDSQADYVKELTQKLQNAGIRVKADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           H+++++P +++CGDKE     + +R         + + + I  L +E      Q+
Sbjct: 585 HTLRRVPYMLVCGDKEVEAGKVAVRTRRGKDLGSLDVSEVIEKLQQEIRSRSLQQ 639


>gi|296446450|ref|ZP_06888394.1| threonyl-tRNA synthetase [Methylosinus trichosporium OB3b]
 gi|296256085|gb|EFH03168.1| threonyl-tRNA synthetase [Methylosinus trichosporium OB3b]
          Length = 643

 Score =  686 bits (1769), Expect = 0.0,   Method: Composition-based stats.
 Identities = 375/651 (57%), Positives = 495/651 (76%), Gaps = 10/651 (1%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +TFPDG+ + F    +G D+A+SIS SLAK+ VA+A++G++ DL+DP+ R+  IE +
Sbjct: 1   MIAVTFPDGASRQFEPGVSGLDIAKSISPSLAKRTVAMALDGELRDLADPIDRDAKIEFV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
             EDPR+L +IRH CAH++AEAVQ ++P  QV IGP+IE+GFYYDF + +PF+ D+L  I
Sbjct: 61  GREDPRALELIRHDCAHLLAEAVQELFPGTQVTIGPVIENGFYYDFYRSEPFTPDDLPAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EKKM+EI+ARD+   K+  + ++A+  F ++ EA+K E++ESIP  E++ +YRQG W DL
Sbjct: 121 EKKMREIVARDAAITKEVWTRDQAKTFFTARGEAFKRELIESIPGGEDLKIYRQGHWLDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ S G+V   FKLMKVAGAYWRGD N PMLSRIYGTA+  Q+EL  YL+ LEE+E
Sbjct: 181 CRGPHLPSIGKVGTAFKLMKVAGAYWRGDHNNPMLSRIYGTAFAKQEELDAYLHRLEEAE 240

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           +RDHR+L REMDLFH  E+G G IFWH KGW +FQ+L+SYMRR +    Y+E+NTPQVLD
Sbjct: 241 RRDHRRLGREMDLFHFQEEGPGTIFWHEKGWALFQSLVSYMRRRQKAAGYKEVNTPQVLD 300

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW +YR NMF  K      +D R FALKPMNCPGHV +F +GLKSYR+LPV+
Sbjct: 301 RALWETSGHWQTYRENMFLTK-----TEDERIFALKPMNCPGHVQIFKNGLKSYRDLPVK 355

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AEFG V+R EPSG+LHG+MRVR FTQDDAH+FC ++Q+  E LKI++LI++IY+DFGF+
Sbjct: 356 IAEFGIVHRYEPSGALHGMMRVRAFTQDDAHIFCNEDQIMEEALKINDLILTIYRDFGFD 415

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            ++VKLSTRPEK VGSD  W  AE  +  VLD +K      + TGV  GEGAFYGPK EY
Sbjct: 416 DVVVKLSTRPEKHVGSDEAWAKAEAALYKVLDELKAR---GLKTGVNPGEGAFYGPKLEY 472

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L+DAIGR+WQCGT QVDFNLP RF AFY+ S SEK  PVMIHRA+FGS+ERF GI+IE+
Sbjct: 473 TLRDAIGREWQCGTTQVDFNLPGRFGAFYIGSDSEKKTPVMIHRAMFGSLERFTGILIEH 532

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G+LPLWLSP+Q +V TIT  A +YA E+A   ++  L+++ D RNE I YK+REHS+ 
Sbjct: 533 YAGHLPLWLSPLQIVVCTITQDADDYAYEVAAEARNVGLAVDLDLRNEKITYKVREHSLA 592

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           K+P++++ G KEA+E ++ IRR GS      +L DA+  L +E+ PPD ++
Sbjct: 593 KVPVLLVVGKKEAAEHTVSIRRLGSQAQSSATLADALAALAEEATPPDVKE 643


>gi|164687668|ref|ZP_02211696.1| hypothetical protein CLOBAR_01310 [Clostridium bartlettii DSM
           16795]
 gi|164603442|gb|EDQ96907.1| hypothetical protein CLOBAR_01310 [Clostridium bartlettii DSM
           16795]
          Length = 639

 Score =  686 bits (1769), Expect = 0.0,   Method: Composition-based stats.
 Identities = 274/643 (42%), Positives = 410/643 (63%), Gaps = 16/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+T  DGSIK F    +  D+A+SIS  LA+  VA ++NG+   L   V  +  + + 
Sbjct: 1   MIKVTLKDGSIKEFEGKVSVLDIAKSISEGLARAVVAASVNGETVGLDYEVCEDCELNLY 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
             +D     V RH+ AH++A+A++ ++P V++AIGP IE+GFYYD D +   + +ELA+I
Sbjct: 61  KFDDEEGKDVFRHTSAHMLAQALKRLYPGVKLAIGPSIENGFYYDIDLDHRITEEELAKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M++I   D    +  LS E A +  +   E YKVE++E +P  E ++ Y+QG++ DL
Sbjct: 121 EAEMKKIAKEDLKIERYELSKEDALKWAKENGEDYKVELIEELPEGEVISFYKQGDFADL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ ST +VK   KL+ VAGAYWRGD    ML RIYGT++   ++L  YL+ +EE++
Sbjct: 181 CRGPHLPSTKKVK-AVKLLSVAGAYWRGDEKNKMLQRIYGTSFEKNKDLEAYLHLMEEAK 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KRDHRKL +E+DLF I E+G G   +  KG ++   L+ + R    +D+Y EI TP +L+
Sbjct: 240 KRDHRKLGKELDLFFIPEEGPGFPLFMPKGMQLKNALLEFWREVHKEDNYVEIETPIILN 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           +HLW+ SGHW  Y+ NM+ VK       D + FA+KPMNCPG +  +     SYR+ P+R
Sbjct: 300 RHLWETSGHWYHYKENMYTVKI------DDQDFAIKPMNCPGGMLYYKSKPHSYRDFPMR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AE G V+R+E SG+LHGLMRVR FTQDDAH+F   EQ+ +E   +  LI S+YK FGF+
Sbjct: 354 VAELGRVHRHELSGALHGLMRVRAFTQDDAHIFMLPEQIKDEIKDVVRLIDSVYKVFGFQ 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
             + +LSTRPE  +G+D  W+ AEN ++  L+ +       +   +  G+GAFYGPK ++
Sbjct: 414 YGI-ELSTRPEDSMGTDEEWEIAENGLREALEELG------LAYEINEGDGAFYGPKIDF 466

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L+D +GR WQCGTIQ+D  LP RF+A Y+    EK  PVMIHR + GSIERFIGI+IE+
Sbjct: 467 HLRDCLGRTWQCGTIQLDMQLPQRFDATYIGQDGEKHRPVMIHRVLLGSIERFIGILIEH 526

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  P+W++P Q  +  I+    +YA+ + + L +  L +E D R E + +KIRE  ++
Sbjct: 527 YAGKFPVWIAPTQVKILPISDKYNDYAKAVKDALFAKGLRVEIDDRAEKMGFKIREAQLE 586

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K+P +++ G+KE    ++ +R         +S+ + + ++ KE
Sbjct: 587 KVPYMLVVGEKEVEANAVSVRSRDKGEMGSLSVDEFVAMVCKE 629


>gi|260770313|ref|ZP_05879246.1| threonyl-tRNA synthetase [Vibrio furnissii CIP 102972]
 gi|260615651|gb|EEX40837.1| threonyl-tRNA synthetase [Vibrio furnissii CIP 102972]
          Length = 642

 Score =  686 bits (1769), Expect = 0.0,   Method: Composition-based stats.
 Identities = 300/642 (46%), Positives = 429/642 (66%), Gaps = 17/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  +VA+SI   LAK  +A  ++G   D  D +  + S+EIIT +
Sbjct: 4   ITLPDGSQRQFDNPVSTLEVAQSIGPGLAKATIAGRVDGVRVDACDLIENDASLEIITAK 63

Query: 66  DP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  A++ ++P+ ++AIGP I++GFYYD D E+  S D++ +IE 
Sbjct: 64  DEVDGLEIVRHSCAHLLGHALKQLYPQAKMAIGPTIDNGFYYDIDLEESLSQDDIEKIEA 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE-SIPAKENVTLYRQGEWFDLC 183
           +M+E+       +K+ +S ++AR+ FE+++E YK+EIL+ ++   +   LY   E+ D+C
Sbjct: 124 RMKELAKTKYQVVKKKVSWQEARDTFEARQEPYKMEILDQNVARDDRPGLYHHEEYIDMC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV   G  + F KL+ VAGAYWRGDSN  ML RIYGTA++ ++ L  +L  LEE+ K
Sbjct: 184 RGPHVPHMGFCQHF-KLLNVAGAYWRGDSNNKMLQRIYGTAFHDKKALQAHLTRLEEAAK 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRK+ +++DLFH+ ++  G++FWH  GW IF+ L  ++R K+ +  Y+E+  P ++D+
Sbjct: 243 RDHRKIGKQLDLFHMQQEAPGMVFWHHNGWSIFRDLEVFIRHKLNEYGYQEVKGPLMMDR 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+
Sbjct: 303 VLWERSGHWDKYADAMFT------TSSENRDYAIKPMNCPGHVQIFNQGLKSYRDLPLRM 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSGSLHG+MRVRGFTQDDAH+FCT++Q+  E      ++   Y  FGF+ 
Sbjct: 357 AEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTEDQIQEEVTSCIKMVYDTYTTFGFDN 416

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I VKLSTRPEKRVGSD +WD +E  +K  L+ +       I   +  GEGAFYGPK E+ 
Sbjct: 417 IAVKLSTRPEKRVGSDEIWDKSEEALKHSLEAMG------IAYEIQEGEGAFYGPKIEFT 470

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D + R WQCGT+Q+DFNLPSR  A YV  ++E+  PVMIHRA+ GS+ERFIGI+IE +
Sbjct: 471 LYDCLDRAWQCGTVQLDFNLPSRLGATYVGENNERLVPVMIHRAILGSLERFIGILIEEY 530

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P QA+V  IT    +YAQE+A  L+   +  + D RNE I +KIREH++K+
Sbjct: 531 AGFFPTWLAPEQAVVVNITDKQADYAQEVAQKLQKCGIRAKADLRNEKIGFKIREHTLKR 590

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P +++CGD+E     I +R        K  L D +  +  E
Sbjct: 591 VPYMLVCGDQEMEAGEIAVRTRKGKDLGKFKLDDFVSHIQTE 632


>gi|52842920|ref|YP_096719.1| threonyl-tRNA synthetase [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
 gi|52630031|gb|AAU28772.1| threonyl tRNA synthase [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
          Length = 646

 Score =  686 bits (1769), Expect = 0.0,   Method: Composition-based stats.
 Identities = 315/648 (48%), Positives = 433/648 (66%), Gaps = 18/648 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP    +  PDG++K+F    T  DVA  IS  LAK A+A  ++G + D S  +  + S+
Sbjct: 10  MP---NVKLPDGNVKHFEAPLTIYDVAHHISPGLAKAAIAGRVDGVLVDTSYLIKEDCSL 66

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            I+T +   SL +IRHS AH++A+AV++++P  QV IGP+IEDGFYYDF  E+ F+ D+L
Sbjct: 67  IIVTEKHEDSLEIIRHSTAHLLAQAVKALFPSAQVTIGPVIEDGFYYDFAFERSFTPDDL 126

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           + IE KM E+   +    ++ L   +A + F+   E YK +I+  IP  E ++LYRQG++
Sbjct: 127 SLIEAKMHELAKANLSITRRELPRNEAIQYFKDLGEEYKAKIIADIPENEALSLYRQGDF 186

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV STG +K F KL KVAGAYWRGDSN  ML RIYGTAW  ++ L +YL+ LE
Sbjct: 187 EDLCRGPHVPSTGFLKAF-KLTKVAGAYWRGDSNNEMLQRIYGTAWADKKSLEEYLFRLE 245

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+EKRDHRKL + +DLFH  +   G++FWH KGW I+Q L  YMR ++ D  Y+EI TPQ
Sbjct: 246 EAEKRDHRKLGKALDLFHFQDIAPGMVFWHPKGWTIYQELEHYMRNRLVDFGYQEIRTPQ 305

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D+ LW++SGHW ++R  MF       T  + R +A+KPM+CP HV ++NHGLKSYR+L
Sbjct: 306 LVDRSLWEKSGHWANFRDEMFV------TETENRHYAVKPMSCPCHVQIYNHGLKSYRDL 359

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RL+EFG+ +R EPSG+LHGLMRVR   QDDAH+FCT++Q+ +E   +  L+ S+YKDF
Sbjct: 360 PLRLSEFGNCHRCEPSGALHGLMRVRNMVQDDAHIFCTEDQIQSEVAMMLELVQSVYKDF 419

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF +I  +L+ RPEKRVGSD +WD AE  +K  +          I      GEGAFYGPK
Sbjct: 420 GFTEIKYRLALRPEKRVGSDDVWDKAETALKLAMQ------GRNIEWVDAPGEGAFYGPK 473

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E  L D +GR WQCGTIQVDF++P+R  A YV     K  PVM+HRA+ GS ERF+GI+
Sbjct: 474 IECSLSDCLGRIWQCGTIQVDFSMPARLEASYVAEDGSKQTPVMLHRAILGSFERFMGIL 533

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE++ G LPLWLSP+QAIV TI+    EYA+++   L+   +    D RNE I +KIREH
Sbjct: 534 IEHYAGKLPLWLSPVQAIVLTISEKQNEYAEKVRKTLQKRGIRANFDLRNEKIGFKIREH 593

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           +++KIP +++ GDKE     + +R         +++      LT+E +
Sbjct: 594 TLQKIPYLLVVGDKEVENCQVAVRTRDGIDLGVMTIDTICDTLTQEII 641


>gi|330951866|gb|EGH52126.1| threonyl-tRNA synthetase [Pseudomonas syringae Cit 7]
          Length = 640

 Score =  685 bits (1768), Expect = 0.0,   Method: Composition-based stats.
 Identities = 300/645 (46%), Positives = 435/645 (67%), Gaps = 18/645 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS ++F    + +DVA SI   LAK  VA  ++GK+ D  D +  + S+
Sbjct: 1   MP---TITLPDGSQRSFDHAVSVADVALSIGAGLAKATVAGKVDGKLVDACDLIENDASL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           +IITP+D   L +IRHSCAH++  AV+ ++P  ++ IGP+I+DGFYYD   E+PF+ D++
Sbjct: 58  QIITPKDQEGLEIIRHSCAHLVGHAVKQLYPTAKMVIGPVIDDGFYYDIAYERPFTPDDM 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A IE++MQ++I +D   +K+     +  E+F ++ E YK+ ++E +P ++ + LY   E+
Sbjct: 118 AGIEQRMQQLIEKDYDVIKKVTPRAEVIEVFTARHEDYKLRLVEDMPNEQAMGLYYHEEY 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            D+CRGPHV +T  +K F KL K++GAYWRGD+    L R+YGTAW  +++L  Y+  +E
Sbjct: 178 VDMCRGPHVPNTRFLKSF-KLTKLSGAYWRGDAKNEQLQRVYGTAWADKKQLAAYILRIE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+EKRDHRK+ + + LFH  E+  G++FWH +GW ++Q L  YMR+ + ++ Y EI TPQ
Sbjct: 237 EAEKRDHRKIGKRLGLFHTQEEAPGMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHW +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYREL
Sbjct: 297 VVDRSLWEKSGHWANYADNMFT------TESESRDYAIKPMNCPCHVQVFNQGLKSYREL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFG+ +RNEPSG+LHG+MRVRGFTQDDAH+FCT++QM  E      L + +Y DF
Sbjct: 351 PMRLAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEDQMQAESAAFIKLTLDVYADF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+ I +KLSTRPEKRVGSD LWD AE+ +   LD+        +   +  GEGAFYGPK
Sbjct: 411 GFKDIELKLSTRPEKRVGSDELWDRAESALASALDSAG------LPYDLQPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD +GR WQCGT+Q+DFNLP R +A YV+  + + +PVM+HRA+ GS ERFIGI+
Sbjct: 465 IEFSLKDCLGRVWQCGTLQLDFNLPIRLSAEYVSEDNSRKNPVMLHRAILGSFERFIGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+++G  P WL+P QA++  IT    ++A E+   L       ++D RNE I +KIREH
Sbjct: 525 IEHYEGAFPAWLAPTQAVIMNITDKQADFALEVEKTLAESGFRAKSDLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           ++ K+P +++ GD+E   +++ +R         + +      L +
Sbjct: 585 TLLKVPYLLVIGDREVEMQTVAVRTREGADLGSMPVAQFAEFLAQ 629


>gi|315498771|ref|YP_004087575.1| threonyl-tRNA synthetase [Asticcacaulis excentricus CB 48]
 gi|315416783|gb|ADU13424.1| threonyl-tRNA synthetase [Asticcacaulis excentricus CB 48]
          Length = 640

 Score =  685 bits (1768), Expect = 0.0,   Method: Composition-based stats.
 Identities = 326/651 (50%), Positives = 441/651 (67%), Gaps = 14/651 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEII 62
            I LTFPDG+++++    TG  +AE +S+SLAKKA  + +NG + DL  P+    +IEI+
Sbjct: 1   MIDLTFPDGAVRSYESGVTGRSIAEGLSKSLAKKAAMLRLNGDLYDLDRPIESSAAIEIL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T EDP  L VIRH  AH++A+AVQ ++P  QV IGP IEDGFYYDF +++PFS D+L +I
Sbjct: 61  TREDPALLEVIRHDTAHLLAQAVQELFPGTQVTIGPAIEDGFYYDFARDEPFSLDDLPKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE-WFD 181
           EKKM+E++ RD   +++    + A + FE   E YK EI+  +P  E +T+YR G+ W D
Sbjct: 121 EKKMKELVDRDDKIVREVWERDAAIQHFEEIGEHYKAEIIRDLPGTETITVYRHGDSWKD 180

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH  S+  + K FKL K+AGAYWRGD N   L RIYGTAW ++++L  Y+  LEE+
Sbjct: 181 LCRGPHFPSSKFIGKAFKLTKLAGAYWRGDHNNAQLQRIYGTAWTSEEDLQAYITRLEEA 240

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
           EKRDHRKL R+M+LFH+ E+G G++FWH  GW +++TL +YMRR++    Y E+ TPQVL
Sbjct: 241 EKRDHRKLGRQMNLFHMQEEGRGMVFWHPHGWTLWRTLEAYMRRRLDAAGYVEVKTPQVL 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D+  W++SGHWD YR NMF  +       +  T +LKPMNCPGHV +F  GL+SY+ELP+
Sbjct: 301 DRTFWEKSGHWDKYRPNMFVCETV-----EGETLSLKPMNCPGHVQIFKVGLRSYKELPI 355

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AEFG+ +R EPSGSLHGLMRVRGFTQDDAH+FC ++Q+  E  K   L   ++ D G 
Sbjct: 356 RMAEFGACHRYEPSGSLHGLMRVRGFTQDDAHIFCREDQIVEETTKFITLCRQVHADLGM 415

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           +   + L+TRPE R GSD  WD      K      + +    +   +  G+GAFY PK +
Sbjct: 416 QAEHIALATRPEVRAGSDEFWD------KAEAQMAEAARAAGVEPVIAEGDGAFYAPKLD 469

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           +I++DAIGR W CGTIQ+D+ LP R  A YV     +  PVM+HRA+ GS ERFIGI+IE
Sbjct: 470 FIVRDAIGRTWTCGTIQLDYVLPERLGAEYVAEDGSRQRPVMLHRAILGSFERFIGIIIE 529

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           N+ G  PLWL+PIQ +V  ITS A +YAQ++A+ L+S  L ++TD RNE INYKIREHS+
Sbjct: 530 NYGGKFPLWLAPIQVVVAPITSDANDYAQQVASKLRSVGLRVDTDLRNEKINYKIREHSL 589

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
            K+P+I + G KEA    + +R  G      +S+  A   L  ESLPPD +
Sbjct: 590 AKVPVIAVVGRKEAETGEVALRYLGQEGQTVLSVDSAAEQLRTESLPPDLK 640


>gi|134095006|ref|YP_001100081.1| threonyl-tRNA synthetase [Herminiimonas arsenicoxydans]
 gi|166223347|sp|A4G619|SYT_HERAR RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|133738909|emb|CAL61956.1| Threonyl-tRNA synthetase (Threonine--tRNA ligase) (ThrRS)
           [Herminiimonas arsenicoxydans]
          Length = 635

 Score =  685 bits (1768), Expect = 0.0,   Method: Composition-based stats.
 Identities = 330/643 (51%), Positives = 437/643 (67%), Gaps = 15/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            I +  PDGS + F    T + VA +I   LAK A+A  +NG V D S  +  +  + II
Sbjct: 1   MITVRLPDGSQREFDTPVTVAQVAANIGAGLAKAALAGKVNGNVVDTSYLIEQDSDLSII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   L VIRHS AH++A AV+ ++P+ QV IGP+IE+GFYYDF  ++PF+ ++L  I
Sbjct: 61  TDKDAEGLDVIRHSTAHLLAYAVKELFPDAQVTIGPVIENGFYYDFSYKRPFTPEDLLAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EKKM E+  +D P  +Q L  + A E F+S  EAYK EI+ SIPA ++V+LY +G++ DL
Sbjct: 121 EKKMAELAKKDEPVTRQVLPRDVAVEYFKSIGEAYKAEIIASIPADQDVSLYTEGKFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG++K F KLMK+AGAYWRGDS   ML RIYGTAW  ++E   YL  LEE+E
Sbjct: 181 CRGPHVPSTGKLKVF-KLMKLAGAYWRGDSKNEMLQRIYGTAWAKKEEQEAYLTMLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD 301
           KRDHRKL R +DLFH  E+  G+IFWH KGW ++Q +  YMRR  + + Y+E+  PQ+LD
Sbjct: 240 KRDHRKLGRALDLFHFQEEAPGLIFWHPKGWTVWQQVEQYMRRVYQDNGYQEVKAPQILD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW++SGHW++Y+ NMF       T  + R++ALKPMNCPGHV +F   L+SYRELP+R
Sbjct: 300 RSLWEKSGHWENYKENMFT------TESENRSYALKPMNCPGHVQIFASDLRSYRELPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
             EFG  +RNEPSGSLHG+MRVRGFTQDD H+FCT++Q+ +EC+    L+  +Y+DFGF 
Sbjct: 354 YGEFGQCHRNEPSGSLHGMMRVRGFTQDDGHIFCTEDQILDECVAFTALLQKVYRDFGFT 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            ++ K++TRPEKRVGSD  WD AE  +   LD    +        +  GEGAFYGPK EY
Sbjct: 414 NVIYKVATRPEKRVGSDEAWDKAEAALIASLDRSGCT------YEISPGEGAFYGPKIEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            LKDAIGR WQCGTIQVDF++P+R  A YV   + K  PVM+HRA+ GS ERFIG++IEN
Sbjct: 468 TLKDAIGRMWQCGTIQVDFSMPARLGAEYVAEDNTKKIPVMLHRAILGSFERFIGMLIEN 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G LPLWL+P+Q  V  I+ +  +YAQ +A  LK     +  D RNE I YKIREHSI+
Sbjct: 528 HAGALPLWLAPVQIAVLNISDAQADYAQAVAQNLKKQGFRVHVDLRNEKITYKIREHSIQ 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K+P II+ GDKE    ++ +R  G+     + +   +  L  E
Sbjct: 588 KLPYIIVIGDKERDAGTVAVRARGNVDLGVMPVDLLVERLNNE 630


>gi|317499591|ref|ZP_07957854.1| threonyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
 gi|316893140|gb|EFV15359.1| threonyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 641

 Score =  685 bits (1768), Expect = 0.0,   Method: Composition-based stats.
 Identities = 274/642 (42%), Positives = 411/642 (64%), Gaps = 16/642 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K+T  DGS+K +  + +  D+A+ IS  LA+ A A  ++G+V DL   + ++  + I+T
Sbjct: 1   MKITLKDGSVKEYENNMSVIDIAKDISEGLARVACAGEVDGEVVDLRTVIDKDCELNILT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +        RH+ +HI+A+AV+ ++PE ++AIGP I++GFYYD +K+ PF+ ++L +IE
Sbjct: 61  FDSDEGKHAFRHTASHILAQAVKRLYPETKLAIGPSIDNGFYYDMEKDTPFTQEDLEKIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M++I+  +          ++A    + + E YKVE++E +P    ++ Y+QGE+ DLC
Sbjct: 121 KEMKKIVKENLEITSFTKPRDEAIAFMKERNEPYKVELIEDLPEDSVISFYQQGEFVDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+ +T  VK F KL  +AGAYWRGD +  ML+RIYGTA+  + EL  YL  +EE+ K
Sbjct: 181 AGPHLMTTKPVKAF-KLTSIAGAYWRGDEHNQMLTRIYGTAFTKKAELDAYLTMMEEARK 239

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           RDHRKL +E+ LF + E+G G  F+  KG  +  TL+ Y R    K  Y EI+TP +L +
Sbjct: 240 RDHRKLGKELGLFMMREEGPGFPFFLPKGMVLKNTLLDYWREIHQKAGYVEISTPIMLSR 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
           HLW+ SGHWD Y+ NM+       T+ D + FA+KPMNCPG V V++   +SYR+LP+R+
Sbjct: 300 HLWETSGHWDHYKENMYT------TVIDDQDFAIKPMNCPGGVLVYDSEPRSYRDLPLRM 353

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            E G V+R+E SG LHGLMRVR FTQDDAH+F T +Q+ +E   +  LI  +Y  FGF+ 
Sbjct: 354 GELGLVHRHEKSGQLHGLMRVRCFTQDDAHIFMTPDQIKDEIKGVAGLIDQVYNLFGFKY 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRP+  +GSD  W+ A + ++  LD +       ++  V  G+GAFYGPK ++ 
Sbjct: 414 H-VELSTRPDDSMGSDEDWELATDSLRAALDDLG------LDYVVNEGDGAFYGPKIDFH 466

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+D+IGR WQCGTIQ+DF LP RF+  Y  +  EK  P+MIHR  FGSIERFIGI+IE+F
Sbjct: 467 LEDSIGRTWQCGTIQLDFQLPLRFDLHYTGADGEKHRPIMIHRVAFGSIERFIGILIEHF 526

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P+Q  V  I+   ++YA ++ + LK+  +  + D R E + YKIRE  ++K
Sbjct: 527 AGAFPTWLAPVQVEVIPISDKHLDYANKVLDTLKAAGIRADIDTRAEKMGYKIREAQLQK 586

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IP +++ G KE    ++ +R        ++ L D +  + +E
Sbjct: 587 IPYMLVVGGKEEENEAVSVRSRFKGDEGQMKLDDFLAAIKEE 628


>gi|86147528|ref|ZP_01065839.1| threonyl-tRNA synthetase [Vibrio sp. MED222]
 gi|85834696|gb|EAQ52843.1| threonyl-tRNA synthetase [Vibrio sp. MED222]
          Length = 642

 Score =  685 bits (1768), Expect = 0.0,   Method: Composition-based stats.
 Identities = 301/642 (46%), Positives = 424/642 (66%), Gaps = 17/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  DVA SI   LAK  +A  ++G+  D  D +  + S+EIIT +
Sbjct: 4   ITLPDGSQRQFDNPVSTLDVALSIGPGLAKATIAGRVDGERVDACDLIENDASLEIITAK 63

Query: 66  DP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  A++ ++PE ++AIGP I++GFYYD D E   + ++L +IEK
Sbjct: 64  DEVDGLEIVRHSCAHLLGHAIKQLFPEAKMAIGPTIDNGFYYDIDLEHSLTQEDLEKIEK 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLC 183
           +M+E+       +K+ +S ++AR+ FE++ E YK+EIL E++   +   LY   E+ D+C
Sbjct: 124 RMKELAKTKYQVVKKKVSWQEARDAFEARGETYKIEILDENVSKDDRPGLYHHEEYIDMC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV   G  + F  L  VAGAYWRG+S+  ML RIYGTA++ ++    +L  LEE+ K
Sbjct: 184 RGPHVPHMGFCQHFTLL-NVAGAYWRGNSDNKMLQRIYGTAFHDKKAFKAHLVRLEEAAK 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRK+ + +DLFH+ ++  G++FWH  GW IF+ L  ++R+K+ + DY+E+  P ++D+
Sbjct: 243 RDHRKIGKHLDLFHMQQEAPGMVFWHHNGWTIFRELEVFIRQKLTEYDYQEVKGPLMMDR 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+
Sbjct: 303 VLWERSGHWDKYAEAMFT------TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRM 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHG+MRVRGFTQDDAHVFCT++Q+  E      ++   Y  FGFE 
Sbjct: 357 AEFGSCHRNEPSGALHGIMRVRGFTQDDAHVFCTEDQVQQEVKACIEMVYDTYTTFGFEN 416

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+VKLSTRPE+RVGSD +WD AE  +K  L+ ++      I   +  GEGAFYGPK E+ 
Sbjct: 417 IVVKLSTRPEQRVGSDEMWDRAEADLKQALEAME------IAYEIQEGEGAFYGPKIEFT 470

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D + R WQCGT+Q+DF LP R  A YV   +E+  PVMIHRA+ GS+ERFIGI+IE +
Sbjct: 471 LHDCLDRAWQCGTVQLDFALPERLGATYVGEDNERHTPVMIHRAILGSLERFIGILIEEY 530

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P QAIV  IT    EY QEIA  L+     ++ D RNE I +KIREH++K+
Sbjct: 531 AGFFPTWLAPEQAIVMGITDKQSEYVQEIAKKLQKSGFRVKADLRNEKIGFKIREHTLKR 590

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P +++CGD+E     I +R        K  + D I  +  E
Sbjct: 591 VPFMLVCGDQEMEAGEIAVRTRKGKDLGKFKVDDFISYIQAE 632


>gi|148548433|ref|YP_001268535.1| threonyl-tRNA synthetase [Pseudomonas putida F1]
 gi|166225483|sp|A5W5E1|SYT_PSEP1 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|148512491|gb|ABQ79351.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Pseudomonas
           putida F1]
          Length = 640

 Score =  685 bits (1768), Expect = 0.0,   Method: Composition-based stats.
 Identities = 290/645 (44%), Positives = 431/645 (66%), Gaps = 18/645 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP    +T PDGS ++F    + ++VA SI   LAK  VA  ++GK+ D  D +  + ++
Sbjct: 1   MPV---ITLPDGSQRSFDHAVSIAEVAASIGAGLAKATVAGKVDGKLVDACDLISNDATL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           +IITP+D   L +IRHSCAH++  AV+ ++P  ++ IGP+I++GFYYD   E+PF+ +++
Sbjct: 58  QIITPKDEEGLEIIRHSCAHLVGHAVKQLYPTAKMVIGPVIDEGFYYDIAYERPFTPEDM 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A IEK+M E+I +D   +K+     +  ++F ++ E YK+ ++E +P ++ + LY   E+
Sbjct: 118 AAIEKRMMELIEKDYDVVKKMTPRAEVIDVFTARGEDYKLRLVEDMPDEQAMGLYYHEEY 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            D+CRGPHV +T  +K F KL K++GAYWRGD+    L R+YGTAW  +++L  Y+  +E
Sbjct: 178 VDMCRGPHVPNTRFLKAF-KLTKLSGAYWRGDAKNEQLQRVYGTAWADKKQLAAYIQRIE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+EKRDHRK+ +++DLFH+ E+  G++FWH  GW ++Q L  YMR  + ++ Y+EI TPQ
Sbjct: 237 EAEKRDHRKIGKQLDLFHLQEEAPGMVFWHANGWTVYQVLEQYMRGVQRENGYQEIKTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHW +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYR+L
Sbjct: 297 VVDRILWERSGHWSNYAENMFT------TSSESRDYAVKPMNCPCHVQVFNQGLKSYRDL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFG+ +RNEPSG+LHG+MRVRGF QDDAH+FCT+EQ+  E      L + +YKDF
Sbjct: 351 PLRLAEFGACHRNEPSGALHGIMRVRGFVQDDAHIFCTEEQVKKEAADFIKLTLDVYKDF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF  I +KLSTRP KRVGS+ LWD AE  +   L+      +  +      GEGAFYGPK
Sbjct: 411 GFSDIAMKLSTRPAKRVGSEELWDRAETALADALN------ESGLEWEYQPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ L+D +GR+WQCGT+Q D NLP R +A Y+   + +  PVM+HRA+ GS ERFIG++
Sbjct: 465 IEFTLRDCLGRNWQCGTLQYDPNLPERLDASYIAEDNSRVRPVMLHRAILGSFERFIGML 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE++ G  P WL+P QA++  IT    ++A E+   L       ++D RNE I +KIREH
Sbjct: 525 IEHYAGVFPAWLAPTQAVIMNITDKQTDFALEVEKSLNGSGFRAKSDLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           ++ K+P +++ GD+E   +++ +R         + +   + +LT+
Sbjct: 585 TLLKVPYLLVIGDREVETQTVAVRTREGADLGSMPVAQFVELLTQ 629


>gi|330967298|gb|EGH67558.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. actinidiae str.
           M302091]
          Length = 640

 Score =  685 bits (1768), Expect = 0.0,   Method: Composition-based stats.
 Identities = 300/645 (46%), Positives = 434/645 (67%), Gaps = 18/645 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T P+GS ++F    + +DVA SI   LAK  VA  ++GK+ D  D +  + S+
Sbjct: 1   MP---TITLPEGSQRSFDHAVSVADVALSIGAGLAKATVAGKVDGKLVDACDLIENDASL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           +IITP+D   L +IRHSCAH++  AV+ ++P  ++ IGP+I+DGFYYD   E+PF+ D+L
Sbjct: 58  QIITPKDAEGLEIIRHSCAHLVGHAVKQLYPTAKMVIGPVIDDGFYYDIAYERPFTPDDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A IE++MQ++I +D   +K      +  E+F ++ E YK+ ++E +P ++ + LY   E+
Sbjct: 118 AAIEQRMQQLIEKDYDVIKIVTPRAEVIEVFTARHEDYKLRLVEGMPDEQAMGLYYHEEY 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            D+CRGPHV +T  +K F KL K++GAYWRGD+    L R+YGTAW  +++L  Y+  +E
Sbjct: 178 VDMCRGPHVPNTRFLKSF-KLTKLSGAYWRGDAKNEQLQRVYGTAWADKKQLAAYIQRIE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+EKRDHRK+ + + LFH  E+  G++FWH +GW ++Q L  YMR+ + ++ Y EI TPQ
Sbjct: 237 EAEKRDHRKIGKRLGLFHTQEEAPGMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHW +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYREL
Sbjct: 297 VVDRSLWEKSGHWANYADNMFT------TQSESRDYAIKPMNCPCHVQVFNQGLKSYREL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFG+ +RNEPSG+LHG+MRVRGFTQDDAH+FCT++QM  E      L + +Y DF
Sbjct: 351 PLRLAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEDQMQAESAAFIKLTLDVYADF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+ I +KLSTRPEKRVGSD LWD AE+ +   LD+        +   +  GEGAFYGPK
Sbjct: 411 GFKDIELKLSTRPEKRVGSDELWDRAESALASALDSAG------LPYDLQPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD +GR WQCGT+Q+DFNLP R +A YV+  + + +PVM+HRA+ GS ERFIGI+
Sbjct: 465 IEFSLKDCLGRVWQCGTLQLDFNLPIRLSAEYVSEDNSRKNPVMLHRAILGSFERFIGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+++G  P WL+P QA++  IT    ++A E+   L       ++D RNE I +KIREH
Sbjct: 525 IEHYEGAFPAWLAPTQAVIMNITDKQADFALEVEKTLAESGFRAKSDLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           ++ K+P +++ GD+E   +++ +R         + +      L +
Sbjct: 585 TLLKVPYLLVIGDREVEMQTVAVRTREGADLGSMPVAQFAEFLAQ 629


>gi|315634189|ref|ZP_07889478.1| threonine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
 gi|315477439|gb|EFU68182.1| threonine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
          Length = 643

 Score =  685 bits (1768), Expect = 0.0,   Method: Composition-based stats.
 Identities = 298/654 (45%), Positives = 429/654 (65%), Gaps = 19/654 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP    +T PDGS + F    T  +VA++I   LAK  +A  +NG+  D  D +  + ++
Sbjct: 1   MPV---ITLPDGSQRQFDKPVTVLEVAQNIGAGLAKATIAGRVNGERKDACDLITEDSTL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT +D   L +IRHS AH++  A++ ++P+V++AIGP I++GFYYD D ++  + +++
Sbjct: 58  EIITAKDEDGLEIIRHSTAHLLGHAIKQLFPDVKMAIGPTIDNGFYYDVDLDRSLTQEDI 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M E+   +   +K  +S ++AR+ FE + E YK+ IL E+I       LY   E
Sbjct: 118 DALEKRMLELAKTNYDVIKTPVSWQEARDTFEKRGEPYKMAILDENIERTATPALYHHQE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KL K+AGAYWRGDS   ML RIYGTAW  +++L  YL  L
Sbjct: 178 YIDMCRGPHVPNMRFCHHF-KLQKIAGAYWRGDSKNKMLQRIYGTAWADKKQLDAYLQRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
           EE+ KRDHRK+ + +DL+H+ E+  G++FWH  GW IF+ L +++R K+ + DY+E+  P
Sbjct: 237 EEAAKRDHRKIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW+++GHW +Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+
Sbjct: 297 FMMDRVLWEKTGHWQNYGDLMFT------TQSENREYAIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+ +E      ++  IY  
Sbjct: 351 LPIRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQIESEVTSCIRMVYDIYST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF  I VKLSTRPEKR+G+D +WD AE  +   L        + +   +  GEGAFYGP
Sbjct: 411 FGFTNIFVKLSTRPEKRIGADEMWDRAEEGLANALKH------NGLEYEIQEGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L+D + R+WQCGTIQ+DF LP R NA YV   +++  PVMIHRA+ GSIERFIGI
Sbjct: 465 KIEFALRDCLDREWQCGTIQLDFALPGRLNASYVAEDNDRRTPVMIHRAILGSIERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E + G  P WL+P QA+V  IT S  EY Q++A  L    L ++TD RNE + +KIRE
Sbjct: 525 ITEEYAGFFPAWLAPTQAVVMNITDSQSEYVQQVAKQLSDAGLRVKTDLRNEKVGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           H+++++P +++CGDKE     + +R          ++ + + IL K+    D +
Sbjct: 585 HTLRRVPYMLVCGDKEIEAGKVAVRTRKGQDLGTFTVEEFLEILKKQVRNRDLK 638


>gi|134282011|ref|ZP_01768717.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 305]
 gi|134246540|gb|EBA46628.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 305]
          Length = 681

 Score =  685 bits (1767), Expect = 0.0,   Method: Composition-based stats.
 Identities = 310/647 (47%), Positives = 436/647 (67%), Gaps = 14/647 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I +T PDGS + F    +  +VA SI   LAK  VA  I+G++ D  D +  +  ++IIT
Sbjct: 14  ITVTLPDGSHRAFNHPVSVIEVARSIGPGLAKNTVAGKIDGRLVDACDVIDHDARLQIIT 73

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+D   L +IRHSCAH++  AV+ I+P  ++ IGP+I+DGF+YD   E+ F+ +++A IE
Sbjct: 74  PKDEEGLEIIRHSCAHLLGHAVKQIYPTAKMVIGPVIDDGFFYDIAYERAFTPEDVAAIE 133

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           ++M+E+IA D   +K+     KA E F S++E YK+ ++  +P  + V LY   E+ D+C
Sbjct: 134 QRMKELIALDYNVIKKMTPRAKAIEAFHSREENYKLRLIADMPDVQAVGLYHHQEYVDMC 193

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +T  +K F    KV+GAYWRGD+    L RIYGTAW  +++L  Y+  +EE+EK
Sbjct: 194 RGPHVPNTRFLKHFRLT-KVSGAYWRGDAKNEQLQRIYGTAWADKKDLDAYIQRMEEAEK 252

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           RDHRKL RE+DLFH  ED  G +FWH +GW +FQ LI+YMRR +    Y E+N+P V+D+
Sbjct: 253 RDHRKLGRELDLFHFQEDAPGAVFWHPRGWAVFQELIAYMRRRQQDAGYVEVNSPDVMDR 312

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW +YR +MF         +D R  ALKPMNCPG   ++ HGLKSYR+LP+R+
Sbjct: 313 SLWEISGHWQNYRDHMFTT-----ETEDGRALALKPMNCPGSALLYRHGLKSYRDLPIRM 367

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG V+R EPSGSLHGL+RVR FTQDDAH++CT +QM  EC ++  L++ IY+ FGF++
Sbjct: 368 GEFGKVHRYEPSGSLHGLLRVRHFTQDDAHIYCTPQQMDAECREVVTLVLDIYRQFGFDE 427

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + +KLSTRPE R+G+DA WD  E  +   L+ +       +   +  GEGAFYGPK E++
Sbjct: 428 VRIKLSTRPENRMGTDATWDQLEGTLVQALEGMG------LQYHLKPGEGAFYGPKLEFV 481

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+DAIGRDWQCGT+QVD NLP RF   YV+   ++  PVM+HRA+FGS+ERF GI+IE+ 
Sbjct: 482 LRDAIGRDWQCGTLQVDMNLPERFGIEYVDEDGQRKRPVMLHRALFGSLERFTGILIEHH 541

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G LP+WL+P+QAIV +IT +   YAQ++A LL+   L  E D RNETI YKIRE ++++
Sbjct: 542 AGRLPVWLAPLQAIVLSITEAHGAYAQDVARLLRGAGLRAEADIRNETIGYKIREQTLQR 601

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPD 649
           IP +++ G KE    ++ IR         + L  A+  L +++  PD
Sbjct: 602 IPFLLVVGAKERDAGAVAIRTRNGDDLGVLPLTQAVARLLQDAQAPD 648


>gi|330989241|gb|EGH87344.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str.
           M301315]
          Length = 640

 Score =  685 bits (1767), Expect = 0.0,   Method: Composition-based stats.
 Identities = 300/645 (46%), Positives = 434/645 (67%), Gaps = 18/645 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS ++F    + +DVA SI   LAK  VA  ++GK+ D  D +  + S+
Sbjct: 1   MP---TITLPDGSQRSFDHAVSVADVALSIGAGLAKATVAGKVDGKLVDACDLIENDVSL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           +IITP+D   L +IRHSCAH++  AV+ ++P  ++ IGP+I+DGFYYD   E+PF+ D++
Sbjct: 58  QIITPKDQEGLEIIRHSCAHLVGHAVKQLYPTAKMVIGPVIDDGFYYDIAYERPFTPDDM 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A IE++MQ++I +D   +K+     +  E+F ++ E YK+ ++E +P ++ + LY   E+
Sbjct: 118 AAIEQRMQQLIEKDYDVIKKVTPRAEVIEVFTARHEDYKLRLVEDMPNEQAMGLYYHEEY 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            D+CRGPHV +T  +K F KL K++GAYWRGD+    L R+YGTAW  +++L  Y+  +E
Sbjct: 178 VDMCRGPHVPNTRFLKSF-KLTKLSGAYWRGDAKNEQLQRVYGTAWADKKQLAAYIQRIE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+EKRDHRK+ + + LFH  E+  G++FWH +GW ++Q L  YMR+ + ++ Y EI TPQ
Sbjct: 237 EAEKRDHRKIGKRLGLFHTQEEAPGMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHW +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYREL
Sbjct: 297 VVDRSLWEKSGHWANYADNMFT------TESESRDYAIKPMNCPCHVQVFNQGLKSYREL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFG+ +RNEPSG+LHG+MRVRGFTQDDAH+FCT++QM  E      L + +Y DF
Sbjct: 351 PMRLAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEDQMQAESAAFIKLTLDVYADF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+ I +KLSTRPEKRVGSD LWD AE  +   LD+        +   +  GEGAFYGPK
Sbjct: 411 GFKDIELKLSTRPEKRVGSDELWDRAETALASALDSAG------LPYDLQPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD +GR WQCGT+Q+DFNLP R +A YV+  + + +PVM+HRA+ GS ERFIGI+
Sbjct: 465 IEFSLKDCLGRVWQCGTLQLDFNLPIRLSAEYVSEDNSRKNPVMLHRAILGSFERFIGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+++G  P WL+P QA++  IT    ++A E+   L       ++D RNE I +KIREH
Sbjct: 525 IEHYEGAFPAWLAPTQAVIMNITDKQADFALEVEKTLAESGFRAKSDLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           ++ K+P +++ GD+E   +++ +R         + +      L +
Sbjct: 585 TLLKVPYLLVIGDREVEMQTVAVRTREGADLGSMPVAQFAEFLAQ 629


>gi|167907142|ref|ZP_02494347.1| threonyl-tRNA synthetase [Burkholderia pseudomallei NCTC 13177]
          Length = 670

 Score =  684 bits (1766), Expect = 0.0,   Method: Composition-based stats.
 Identities = 310/647 (47%), Positives = 436/647 (67%), Gaps = 14/647 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I +T PDGS + F    +  +VA SI   LAK  VA  I+G++ D  D +  +  ++IIT
Sbjct: 3   ITVTLPDGSHRAFNHPVSVIEVARSIGPGLAKNTVAGKIDGRLVDACDVIDHDARLQIIT 62

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+D   L +IRHSCAH++  AV+ I+P  ++ IGP+I+DGF+YD   E+ F+ +++A IE
Sbjct: 63  PKDEEGLEIIRHSCAHLLGHAVKQIYPTAKMVIGPVIDDGFFYDIAYERAFTPEDVAAIE 122

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           ++M+E+IA D   +K+     KA E F S++E YK+ ++  +P  + V LY   E+ D+C
Sbjct: 123 QRMKELIALDYNVIKKMTPRAKAIEAFHSREENYKLRLIADMPDVQAVGLYHHQEYVDMC 182

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +T  +K F    KV+GAYWRGD+    L RIYGTAW  +++L  Y+  +EE+EK
Sbjct: 183 RGPHVPNTRFLKHFRLT-KVSGAYWRGDAKNEQLQRIYGTAWADKKDLDAYIQRMEEAEK 241

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           RDHRKL RE+DLFH  ED  G +FWH +GW +FQ LI+YMRR +    Y E+N+P V+D+
Sbjct: 242 RDHRKLGRELDLFHFQEDAPGAVFWHPRGWAVFQELIAYMRRRQQDAGYVEVNSPDVMDR 301

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW +YR +MF         +D R  ALKPMNCPG   ++ HGLKSYR+LP+R+
Sbjct: 302 SLWEISGHWQNYRDHMFTT-----ETEDGRALALKPMNCPGSALLYRHGLKSYRDLPIRM 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            EFG V+R EPSGSLHGL+RVR FTQDDAH++CT +QM  EC ++  L++ IY+ FGF++
Sbjct: 357 GEFGKVHRYEPSGSLHGLLRVRHFTQDDAHIYCTPQQMDAECREVVTLVLDIYRQFGFDE 416

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + +KLSTRPE R+G+DA WD  E  +   L+ +       +   +  GEGAFYGPK E++
Sbjct: 417 VRIKLSTRPENRMGTDATWDQLEGTLVQALEGMG------LQYHLKPGEGAFYGPKLEFV 470

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+DAIGRDWQCGT+QVD NLP RF   YV+   ++  PVM+HRA+FGS+ERF GI+IE+ 
Sbjct: 471 LRDAIGRDWQCGTLQVDMNLPERFGIEYVDEDGQRKRPVMLHRALFGSLERFTGILIEHH 530

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G LP+WL+P+QAIV +IT +   YAQ++A LL+   L  E D RNETI YKIRE ++++
Sbjct: 531 AGRLPVWLAPLQAIVLSITEAHGAYAQDVARLLRGAGLRAEADIRNETIGYKIREQTLQR 590

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPD 649
           IP +++ G KE    ++ IR         + L  A+  L +++  PD
Sbjct: 591 IPFLLVVGAKERDAGAVAIRTRNGDDLGVLPLTQAVARLLQDAQAPD 637


>gi|88800311|ref|ZP_01115877.1| threonyl-tRNA synthetase [Reinekea sp. MED297]
 gi|88776888|gb|EAR08097.1| threonyl-tRNA synthetase [Reinekea sp. MED297]
          Length = 643

 Score =  684 bits (1766), Expect = 0.0,   Method: Composition-based stats.
 Identities = 302/647 (46%), Positives = 429/647 (66%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS + F    +   +AE I   LA+  +A  ING+  D  D V  + +I
Sbjct: 1   MPV---ITLPDGSKREFDQPVSIMQIAEDIGPGLARNTLAGRINGERVDACDLVTADSNI 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIITP+D   L +IRHSCAH++  A++ ++P+V++AIGP IE+GFYYD D E   + D+L
Sbjct: 58  EIITPKDDDGLEIIRHSCAHLLGHAIKQLYPDVKMAIGPTIENGFYYDVDMEHRLTEDDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE-SIPAKENVTLYRQGE 178
           A++EK+M ++   +   +K+ +S ++A ++F ++ E YK EILE +I   +   LY   E
Sbjct: 118 AELEKRMLQLAKTNYDVVKKSVSWQEAHDVFVNRGEPYKQEILEQNIAKSDQPGLYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KLM+++GAYWRGDS+   L RIYGTAW  +++L  +L FL
Sbjct: 178 YIDMCRGPHVPNMKFCHHF-KLMRISGAYWRGDSSNKQLQRIYGTAWADKKQLKAHLLFL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTP 297
           EE+ KRDHRK+ +++DLFH+ ED  G++FWH  GW ++Q +  YMRRK  +  Y+EI TP
Sbjct: 237 EEAAKRDHRKIGKKLDLFHLQEDAPGMVFWHPNGWTMYQVIEQYMRRKQHQHGYQEIKTP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            V+D+ LW++SGHWD +  +MF       T  + R  A+KPMNCP HV VFN GLKSYR+
Sbjct: 297 MVVDRSLWEKSGHWDKFGDDMFT------THSESRDNAIKPMNCPCHVQVFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+RLAEFGS +RNE SG+LHG+MRVRGF QDDAH+FCT+ Q+ +E      ++  +Y D
Sbjct: 351 LPLRLAEFGSCHRNEASGALHGIMRVRGFVQDDAHIFCTEGQIQSEVASFIGMLEEVYHD 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF+  ++KLSTRPE+RVGSD  WD AE  +   L+             +L GEGAFYGP
Sbjct: 411 FGFDDYILKLSTRPEQRVGSDEDWDRAEEALSEALNATGK------EWAILPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ LKD++GR WQCGTIQVDF++P R +A YV+ H E+  PVM+HRA+ GS ERF+GI
Sbjct: 465 KIEFTLKDSLGRLWQCGTIQVDFSMPGRLDAQYVDEHGERQTPVMLHRAIVGSFERFLGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE + G +P WL+P+QA+V  IT +  E AQ I   L++     + D RNE I +KIRE
Sbjct: 525 LIEQYAGAMPPWLAPVQAMVLNITDAQAETAQNIVKNLENQGFRAKADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H+I++IP +++ GDKE    ++ +R         ++L +    +  +
Sbjct: 585 HTIQRIPYLLVVGDKEVENGTVAVRTREGQDLGVMTLAEFSDRIQSD 631


>gi|92113922|ref|YP_573850.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase
           [Chromohalobacter salexigens DSM 3043]
 gi|123387452|sp|Q1QWK7|SYT_CHRSD RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|91797012|gb|ABE59151.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase
           [Chromohalobacter salexigens DSM 3043]
          Length = 632

 Score =  684 bits (1766), Expect = 0.0,   Method: Composition-based stats.
 Identities = 317/640 (49%), Positives = 433/640 (67%), Gaps = 15/640 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS K F    T   +AESI   LAK  VA  I+G   D +D +  +  + I+TP 
Sbjct: 4   VTLPDGSQKTFDSPITVMQLAESIGTGLAKACVAGKIDGVPVDTADVIEHDAEVSILTPR 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  AV+ ++P+ ++AIGP+I+DGFYYD D  Q  S ++L  IEK+
Sbjct: 64  DQEGLEIIRHSCAHLVGHAVKQLYPDAKMAIGPVIDDGFYYDIDFGQSVSPEDLEAIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+ +I  +   +++Y++ E+A   F  + E YK EI+E I   E V LY   E+ D+CRG
Sbjct: 124 MKVLIDHEYEVIREYVTKEQALATFIDRDEPYKQEIVEGIADGETVRLYHHEEYIDMCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +T  +K F KL K+AGAYWRGD+N+PML+RIYGTAW  ++ L  YL  LEE+EKRD
Sbjct: 184 PHVPNTRHLKAF-KLTKLAGAYWRGDANKPMLTRIYGTAWADKKALKTYLKRLEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHL 304
           HRKLAR++D FH+ E+  G++FWH +GW ++QT+  YMR   KD  Y+EI  PQ++D  L
Sbjct: 243 HRKLARKLDFFHMQEEAPGMVFWHPRGWTLWQTVEQYMRGVYKDSGYQEIRCPQIMDVSL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           WQ+SGHWD+Y  NMF       T  + R +ALKPMNCPGHV VFN GL+SYRELPVR  E
Sbjct: 303 WQKSGHWDNYAENMFF------TESEKREYALKPMNCPGHVQVFNSGLRSYRELPVRYGE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FG  +RNEPSG+LHG+MRVR FTQDD HVFCT+EQ+  E    H   +++Y+DFGF+ I 
Sbjct: 357 FGGCHRNEPSGALHGIMRVRAFTQDDGHVFCTEEQIEPEVTAFHRQALAVYRDFGFDDIA 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           VK++ RPEKR+GSD  WD AE  ++  L      S+  +    L GEGAFYGPK EY ++
Sbjct: 417 VKIALRPEKRLGSDDNWDRAEEALRNAL------SRCDVEWEELPGEGAFYGPKIEYHMR 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D +GR+WQ GT+QVDF +P+R  A YV     +  PVM+HRA+ GS+ERFIGI+IE++ G
Sbjct: 471 DCLGREWQVGTMQVDFMMPTRLGAQYVAEDGSRQAPVMLHRAIVGSMERFIGILIEHYAG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
           ++PLWLSP+QA+V  IT +  EYA+ +   L+   L ++TD RNE I +KIREH+++KIP
Sbjct: 531 SMPLWLSPLQAVVLNITDAQREYAESVTQRLQKSGLRVKTDLRNEKIGFKIREHTLQKIP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            +++ GDKE    ++ +R         +S+   I  L +E
Sbjct: 591 YLLVVGDKEVEAGAVAVRTRSGEDLGSLSVDALIARLQEE 630


>gi|254481727|ref|ZP_05094970.1| threonyl-tRNA synthetase [marine gamma proteobacterium HTCC2148]
 gi|214037856|gb|EEB78520.1| threonyl-tRNA synthetase [marine gamma proteobacterium HTCC2148]
          Length = 640

 Score =  684 bits (1766), Expect = 0.0,   Method: Composition-based stats.
 Identities = 320/646 (49%), Positives = 435/646 (67%), Gaps = 18/646 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS + F    +  DVA  I   LAK A+A  ++G+  D S  V  + ++
Sbjct: 1   MPV---ITLPDGSQRAFENPVSVHDVAADIGPGLAKAALAGVVDGREVDTSHIVEADAAL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT  D   L VIRHS AH++A+A Q ++P +QV IGP+IEDGF+YDF     F+ ++L
Sbjct: 58  AIITERDEAGLEVIRHSTAHLLAQATQQLFPGIQVTIGPVIEDGFFYDFATGHNFTPEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IE++M+EI+ +D    +   S EKA E+F +  E YKV+I+E +PA E +++Y+QG W
Sbjct: 118 EKIEQRMEEIVQQDLTVERIVCSREKAVEIFRNMGERYKVQIIEELPADEEISIYQQGAW 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV STG++K F KL KVAGAYWRGDSN  ML R+YGTAW  +++L QYL  +E
Sbjct: 178 MDLCRGPHVPSTGKLKAF-KLTKVAGAYWRGDSNNEMLQRVYGTAWANKKQLKQYLNRIE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+EKRDHRK+ +++DLFH  E+  G++FWH  GW I+QT+  YMR  + + DY+EI TPQ
Sbjct: 237 EAEKRDHRKIGKKLDLFHTQEEAPGMVFWHPAGWSIYQTIEQYMREGQQQHDYQEIKTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D  LW++SGH D +  +MF +K  D      R FA+KPMNCP HV VFN GLKSYR+L
Sbjct: 297 LVDLSLWKKSGHADKFGDDMFMLKAED------REFAVKPMNCPCHVQVFNQGLKSYRDL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFGS +RNEPSGSLHG+MRVRGF QDDAH+FCT+EQ+  E     + + S+Y+DF
Sbjct: 351 PLRLAEFGSCHRNEPSGSLHGIMRVRGFVQDDAHIFCTEEQIQPEVSSFIDFLHSVYEDF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF  ++ +LSTRPE+RVGSD  WD AE  +   L+         +    L GEGAFYGPK
Sbjct: 411 GFADVIYRLSTRPEQRVGSDQDWDRAEKALADALNA------QDLPWETLPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD IGR WQ GTIQVDF++P R +A YV     +  PVM+HRA+ GS ERFIGI+
Sbjct: 465 IEFSLKDCIGRVWQLGTIQVDFSMPGRLDAQYVAEDGSRQVPVMLHRAILGSFERFIGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+++G  P WL+P QA+V  IT    EYA+ + + LK+    + +D RNE I +KIREH
Sbjct: 525 IEHYEGIFPTWLAPTQAVVLNITDKQSEYAKSVEDSLKNKGFRVISDLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +I+K+P +++ GDKE   +++ +R         + L      L  +
Sbjct: 585 TIQKVPYLLVVGDKEVESQTLAVRARRGEDLGSMDLEAFETHLADD 630


>gi|332525938|ref|ZP_08402079.1| threonyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2]
 gi|332109489|gb|EGJ10412.1| threonyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2]
          Length = 635

 Score =  684 bits (1765), Expect = 0.0,   Method: Composition-based stats.
 Identities = 325/643 (50%), Positives = 446/643 (69%), Gaps = 15/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            I++T PDGS + +P   T +DVA SI   LAK A+A  ++GK+ D S  +  +  + I+
Sbjct: 1   MIQITLPDGSRREYPAPLTVADVAASIGAGLAKAALAGRVDGKLVDTSYRIERDAQLAIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +DP +L +IRHS AH++A AV+ ++PE QV IGP +E+GFYYDF  ++PF+ ++LA I
Sbjct: 61  TEKDPDALELIRHSTAHLLAYAVKQLFPEAQVTIGPTVENGFYYDFAYKRPFTPEDLAAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M E+ A++ P +++ L  ++A   F+   E YK EI+ SIP+ E+V+LYR+G++ DL
Sbjct: 121 EKRMAELAAKNEPVVRRVLPRDEAVAYFKGLGEDYKAEIIGSIPSNEDVSLYREGDFEDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG++K F KLMKVAGAYWRGD N   L RIYGTAW T+ EL  YL  LEE+E
Sbjct: 181 CRGPHVPSTGRLKHF-KLMKVAGAYWRGDQNNEQLQRIYGTAWATKDELQGYLRMLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD 301
           KRDHRKL RE+DLFH+ E   G +FWH KGW ++Q +  YMRR  + + Y+E+  PQ+LD
Sbjct: 240 KRDHRKLGRELDLFHLDEHSPGTVFWHPKGWTVWQEVEQYMRRVYRDNGYQEVKGPQILD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+++GHWD YR NMF       T  + R +ALKPMNCPGH+ +F  G+KSYR+LP+R
Sbjct: 300 KALWEKTGHWDKYRENMFT------TESEKRDYALKPMNCPGHILIFKQGIKSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
             EFG  +RNEP+G LHG+MRVRGFTQDD H+FCT++ +  EC+    L+  +Y+DFGF 
Sbjct: 354 YGEFGQCHRNEPTGGLHGIMRVRGFTQDDGHIFCTEDMILGECVAYTALLQKVYRDFGFT 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            I+ K++TRPEKR+GSDA+WD AE  +   L           +  +  G+GAFYGPK EY
Sbjct: 414 DILYKVATRPEKRIGSDAIWDKAEEALIESLKRSGC------DYVIAPGDGAFYGPKIEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            LKDAIGR WQCGT+QVDF++  R +A YV     + HPVM+HRA+ GS+ERFIGI+IE 
Sbjct: 468 TLKDAIGRQWQCGTMQVDFSMAERLDAEYVAEDGSRRHPVMLHRAIVGSLERFIGILIEQ 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G LP+WL+P+QA+V +IT S  +YA E+A  L+   L +  D RNE INYKIREHS++
Sbjct: 528 HAGALPVWLAPVQAVVASITDSQADYAAEVAKSLQKQGLRVHLDLRNEKINYKIREHSVQ 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K P I++ GDKE +  ++ +R  G+     + L D    +  +
Sbjct: 588 KAPFILVVGDKEKANGAVAVRARGNLDLGVMPLADFQQKIASD 630


>gi|254453851|ref|ZP_05067288.1| threonyl-tRNA synthetase [Octadecabacter antarcticus 238]
 gi|198268257|gb|EDY92527.1| threonyl-tRNA synthetase [Octadecabacter antarcticus 238]
          Length = 649

 Score =  684 bits (1765), Expect = 0.0,   Method: Composition-based stats.
 Identities = 328/654 (50%), Positives = 442/654 (67%), Gaps = 10/654 (1%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           M   I LTFPDG+ + +    T + VA SI+ SLAKKA++  +NG+  D++ P+  + S+
Sbjct: 1   MAQQISLTFPDGNARQYDAGVTPAVVAASIASSLAKKAISATVNGEHWDMAWPINADASV 60

Query: 60  EIITPEDPR-SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
            I T +D   +L +IRH  AHIMA AVQ +WP+ QV IGP+I+DG+YYDFD+++PF+ D+
Sbjct: 61  AINTMKDEAPALELIRHDLAHIMARAVQELWPDTQVTIGPVIKDGWYYDFDRKKPFTPDD 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           LA IEKKM+EII +      +    E A + +E + E YKVE++  IP  E + +Y  G+
Sbjct: 121 LATIEKKMKEIINKRDAVRTEVWDREVAIKYYEDRGEPYKVELINGIPGDEPLRMYWHGD 180

Query: 179 WFDLCRGPHVRSTGQ-VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           W DLCRGPH+++TGQ     +KLM +AGAYWRGDS+R ML RIYG A+  +++L  ++  
Sbjct: 181 WQDLCRGPHLQNTGQVPGDSWKLMSIAGAYWRGDSDRAMLQRIYGVAFQNKEQLRAHMNM 240

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINT 296
           LEE+ KRDHRKL REMDLFH+ E+  G IFWH  GW I+  L  YMRRK +   Y E+NT
Sbjct: 241 LEEAAKRDHRKLGREMDLFHMQEEAPGQIFWHPNGWLIYTQLQDYMRRKQRAGGYVEVNT 300

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           PQV+D+ LW+QSGHW+ Y+ +MF V+  +D  ++    ALKPMNCP HV ++N GLKSYR
Sbjct: 301 PQVVDRKLWEQSGHWEKYQEHMFVVEVDEDHAREKSVNALKPMNCPCHVLIYNQGLKSYR 360

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +LP+R+AEFGS  R EPSG+LHG+MRVRGFTQDDAH+FCT++Q+  E L     +  +YK
Sbjct: 361 DLPMRMAEFGSCNRYEPSGALHGIMRVRGFTQDDAHIFCTEDQIEEETLTYIEFLTGVYK 420

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           D GFE   VK S RP+ R GSD +WD AE  +      +  + +  I   +  GEGAFYG
Sbjct: 421 DLGFENFKVKFSDRPDTRAGSDEVWDKAETAL------LAATRKAGIEPELNPGEGAFYG 474

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK E++L DAIGRDWQCGT QVDF LP R +A Y+ +  EK  PVM+HRA  GS ERFIG
Sbjct: 475 PKLEFVLTDAIGRDWQCGTHQVDFVLPDRLDANYIGADGEKHRPVMLHRATLGSFERFIG 534

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           I+IE   G LP WL+P Q +V +I S A +Y +E+   L++  +  E D RNE INYK+R
Sbjct: 535 ILIEEHAGKLPFWLAPRQVVVASIISDADDYVREVVAALQAKGVRAEADIRNEKINYKVR 594

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDC 650
           EHS+ K+P+I+ CG +E  ER++ +RR G   T   +L   +  L   + PPD 
Sbjct: 595 EHSLGKVPVILACGAREVEERTVSVRRLGDKQTSVTTLAVIVEDLQISATPPDL 648


>gi|89094703|ref|ZP_01167639.1| threonyl-tRNA synthetase [Oceanospirillum sp. MED92]
 gi|89081049|gb|EAR60285.1| threonyl-tRNA synthetase [Oceanospirillum sp. MED92]
          Length = 639

 Score =  684 bits (1765), Expect = 0.0,   Method: Composition-based stats.
 Identities = 312/643 (48%), Positives = 437/643 (67%), Gaps = 18/643 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS + F    T  +VA  I   LAK A+A  ++G+  D S  +  +  +
Sbjct: 1   MPV---ITLPDGSKREFANPVTVFEVAADIGAGLAKAALAGKVDGQEVDTSYTIENDADL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT  D   L VIRHS AH+MA AVQ ++P  QV IGP+IEDGFYYDF  E+PF+ ++L
Sbjct: 58  AIITARDEAGLEVIRHSTAHLMAMAVQELFPGAQVTIGPVIEDGFYYDFAYERPFTPEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IEKKM E+  ++ P  +  +S ++A ++F+   E YKVE+L+++P  E+++ Y QG++
Sbjct: 118 EKIEKKMAELAKQNLPVTRSLMSRDEATKMFDEMGEKYKVELLQAVPDSEDLSFYSQGDF 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV STG +K F KLMKVAGAYWRGDSN  ML RIYGTAW  ++ L  YL+ LE
Sbjct: 178 IDLCRGPHVPSTGHIKAF-KLMKVAGAYWRGDSNNEMLQRIYGTAWGDKKALKAYLHRLE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+EKRDHRKL +++DLFH+ E+  G++FWH KGW ++Q +  YMR+K+    Y E+ TPQ
Sbjct: 237 EAEKRDHRKLGKQLDLFHLQEEAPGMVFWHPKGWALYQGIEQYMRQKLRPRKYVEVKTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+++ LW++SGHW+ +   MF       T  + R FA+KPMNCP HV V+N G++SYR+L
Sbjct: 297 VVERTLWEKSGHWEKFSEEMFT------THSENRDFAVKPMNCPCHVQVYNQGIRSYRDL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFGS +RNEPSG+LHG+MRVRGF QDD H+FC ++ + +E  +  + +  +Y DF
Sbjct: 351 PLRMAEFGSCHRNEPSGALHGIMRVRGFVQDDGHIFCAEDSIQSEVSEFIDFLHEVYADF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF++I  KLSTRPEKRVGSD +WD +E  +   LD         +   +L GEGAFYGPK
Sbjct: 411 GFQEIQYKLSTRPEKRVGSDEVWDKSEKALADALDNAG------LKWDLLPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD +GR WQCGT+QVDF++P R  A +VN   E+  PVMIHRA+ GS ERFIGI+
Sbjct: 465 IEFSLKDCLGRVWQCGTVQVDFSMPGRLGAQFVNEQGERETPVMIHRAILGSFERFIGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IEN+ G LP WL+P+QA+V  IT    +Y +++   L++     E+D RNE I +KIRE 
Sbjct: 525 IENYAGALPTWLAPVQAVVMNITDKQADYCEKVVQNLENKGFRAESDLRNEKIGFKIRER 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           +++K+P +++ GDKE    ++ +R         + L + + +L
Sbjct: 585 TLQKVPYLLVIGDKEVEAGAVAVRTRTGEDLGSMPLDEFVNLL 627


>gi|171463692|ref|YP_001797805.1| threonyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           necessarius STIR1]
 gi|238689063|sp|B1XV14|SYT_POLNS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|171193230|gb|ACB44191.1| threonyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           necessarius STIR1]
          Length = 640

 Score =  684 bits (1765), Expect = 0.0,   Method: Composition-based stats.
 Identities = 319/640 (49%), Positives = 445/640 (69%), Gaps = 15/640 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS + F      +DVA+SI   LAK A+   ++GK+ D S  + ++  + IIT +
Sbjct: 4   VTLPDGSKREFEAPVRVADVAQSIGSGLAKAALGGIVDGKMVDTSFVIDKDSQLAIITDK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
            P +L ++RHS AH++A AV+ ++PE QV IGP+IE+GFYYDF   +PF+ D+L  +EKK
Sbjct: 64  SPEALEIVRHSTAHLLAYAVKELFPEAQVTIGPVIENGFYYDFSYHRPFTPDDLVALEKK 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M E+  RD P  +  +  ++A E F+ + E YK E++ SIP  E+V+LY +G++ DLCRG
Sbjct: 124 MTELAKRDEPVTRTVMPRDEAVEFFKKQGENYKAELIASIPQGEDVSLYAEGKFTDLCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV STG++K F KLMK+AGAYWRGDS   ML RIYGT W  +++   YL+ LEESEKRD
Sbjct: 184 PHVPSTGKLKVF-KLMKLAGAYWRGDSKNEMLQRIYGTTWLRKEDQDAYLHMLEESEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHL 304
           HR+L +++DLFH  E+  G+IFWH KGW I+Q +  YMRR  + + Y+E+  PQ+LD+ L
Sbjct: 243 HRRLGKQLDLFHFQEEAPGLIFWHPKGWSIWQEVEQYMRRVYQQEGYQEVKAPQILDRGL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHW++Y+ NMF       T  + R +ALKPMNCPGHV ++N GL SYRELP+R  E
Sbjct: 303 WEKSGHWENYKENMFT------TESENRAYALKPMNCPGHVQIYNSGLHSYRELPLRFGE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FG  +RNEPSG+LHGLMRVRGFTQDD H+FCT++Q+ +E       + ++Y+DFGF ++ 
Sbjct: 357 FGQCHRNEPSGALHGLMRVRGFTQDDGHIFCTEDQIQSEVAAFDKAVRAVYQDFGFTEVA 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           VKL+ RP KRVG DA+WD AE  ++G L       ++      L GEGAFYGPK EY LK
Sbjct: 417 VKLALRPAKRVGDDAIWDKAEEALRGALKASGQEWEE------LPGEGAFYGPKIEYHLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D+IGR WQCGTIQVDF++P+R  A YV  ++ +  PVM+HRA+ GS+ERFIGI+IEN  G
Sbjct: 471 DSIGRTWQCGTIQVDFSMPARLGAEYVAENNSRKTPVMLHRAIVGSLERFIGILIENHTG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
           N+P+WL+P QA+V  I+ ++  YAQ++  LLK     IE+D RNE I YKIRE++++K P
Sbjct: 531 NMPVWLAPTQAVVLNISGNSAAYAQQVQQLLKKQGFRIESDLRNEKITYKIREYALQKTP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            ++I GDKE+   ++ +R  G      + L   +  L ++
Sbjct: 591 FLLIVGDKESESNTVAVRARGGVDLGVMPLDAFVARLQQD 630


>gi|269963856|ref|ZP_06178168.1| threonyl-tRNA synthetase [Vibrio harveyi 1DA3]
 gi|269831343|gb|EEZ85490.1| threonyl-tRNA synthetase [Vibrio harveyi 1DA3]
          Length = 655

 Score =  684 bits (1765), Expect = 0.0,   Method: Composition-based stats.
 Identities = 294/642 (45%), Positives = 426/642 (66%), Gaps = 17/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  +VA+SI   LAK  +A  +NG   D  D +  + S+EIIT +
Sbjct: 17  ITLPDGSQRQFDNPVSTMEVAQSIGPGLAKATIAGRVNGNRVDACDLIEEDASLEIITVK 76

Query: 66  DP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  A++ ++P+ ++AIGP I++GFYYD D ++  + ++L +IEK
Sbjct: 77  DEVDGLEIVRHSCAHLLGHALKQLYPQAKMAIGPTIDNGFYYDIDLDESLTQEDLEKIEK 136

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLC 183
           +M+E+       +K+ +S ++AR+ FES+ E YKVEIL E++   +   LY   E+ D+C
Sbjct: 137 RMKELAKTKYEVVKKKVSWQEARDTFESRGEPYKVEILDENVSRDDRPGLYHHEEYIDMC 196

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +    + F  L  VAGAYWRG+S+  ML RIYGTA++ ++ L  +L  LEE+ K
Sbjct: 197 RGPHVPNMSFCQHFTLL-NVAGAYWRGNSDNKMLQRIYGTAFHDKKALKAHLTRLEEAAK 255

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRK+ +++DLFH+ ++  G++FWH  GW +F+ L  ++R K+ +  Y+E+  P ++D+
Sbjct: 256 RDHRKIGKQLDLFHMQQEAPGMVFWHHNGWSVFRDLEVFIRSKLDEYGYQEVKGPLMMDR 315

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+
Sbjct: 316 VLWERSGHWDKYADAMFT------TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRM 369

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHG+MRVRGFTQDDAH+FCT+ Q+  E      ++   Y+ FGF+ 
Sbjct: 370 AEFGSCHRNEPSGALHGIMRVRGFTQDDAHIFCTESQIQEEVTNCIKMVYDTYQTFGFDN 429

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+VKLSTRPEKRVGSD +WD +E  +K  L++++      I   +  GEGAFYGPK E+ 
Sbjct: 430 IVVKLSTRPEKRVGSDEIWDQSEEALKQSLESME------IPYEIQEGEGAFYGPKIEFT 483

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D + R WQCGT+Q+DFNLP R  A YV  ++E+  PVMIHRA+ GS+ERFIGI+IE +
Sbjct: 484 LYDCLDRAWQCGTVQLDFNLPGRLGATYVGENNERLVPVMIHRAILGSLERFIGILIEEY 543

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P QAI+  IT    EY QE+   L+   +  + D RNE I +KIREH++K+
Sbjct: 544 AGFFPTWLAPEQAILMNITDKQSEYVQEVVQKLQKSGIRAKADLRNEKIGFKIREHTLKR 603

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P +++ GD+E     I +R        K  + D I  +  E
Sbjct: 604 VPYMLVVGDQEMEAGEIAVRTRKGKDLGKFKVDDFIAYIQDE 645


>gi|304436955|ref|ZP_07396918.1| threonine--tRNA ligase [Selenomonas sp. oral taxon 149 str.
           67H29BP]
 gi|304369906|gb|EFM23568.1| threonine--tRNA ligase [Selenomonas sp. oral taxon 149 str.
           67H29BP]
          Length = 639

 Score =  684 bits (1765), Expect = 0.0,   Method: Composition-based stats.
 Identities = 291/644 (45%), Positives = 412/644 (63%), Gaps = 18/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IKLT PDGS++      +  DV + +S SLAKKA+A +++GKV DL+ PV ++ ++ ++
Sbjct: 1   MIKLTLPDGSVREAEAGTSILDVVKGMSNSLAKKALAASLDGKVVDLTTPVTKDAALRVL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVA--IGPIIEDGFYYDFDKEQPFSSDELA 120
           T +D      +RH+ AH+MA+AV+ ++PE  V   IGP IE+GFYYDFD E   +  +L 
Sbjct: 61  TFDDEGGRHALRHTAAHVMAQAVKRLYPESHVQLAIGPAIENGFYYDFDMEHQLTDADLR 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEK+M++I+  + P +++ +   +A  LF  K E YKVE++E +P  E ++LY QGE+ 
Sbjct: 121 DIEKEMKKIVKENLPLVRREIPRAEAIALFREKGENYKVELIEDLPEDEVISLYTQGEFT 180

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLC GPHV STG+VK F KL  VAGAYWRG     ML RIYGTA+  Q+EL  YL+ LEE
Sbjct: 181 DLCAGPHVVSTGKVKAF-KLQSVAGAYWRGSEKNKMLQRIYGTAFEKQEELDAYLHMLEE 239

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           + KRDHRKL RE+DLF + E+G G  F+H  G  +   L+ Y R    +  Y+EI+TP +
Sbjct: 240 AAKRDHRKLGRELDLFSLHEEGPGFPFFHPNGMALRNALLDYWREVHRRYGYQEISTPVI 299

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           L + LW+ SGHW  YR NM+       T  D   +A+KPMNCPG + V+   L SYR+LP
Sbjct: 300 LSRKLWETSGHWFHYRENMYT------TEIDEEDYAIKPMNCPGCMLVYRSQLHSYRDLP 353

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +RLAE G V+R+E SG+LHGL RVR FTQDDAH+F T +Q+  E     +L   +Y+ FG
Sbjct: 354 LRLAELGLVHRHELSGALHGLFRVRNFTQDDAHLFVTPDQIEGEIQHTIDLFDEVYRTFG 413

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
                 +LSTRPE  +G+D +W+ A N ++  LD         ++  V  G+GAFYGPK 
Sbjct: 414 LTY-KAELSTRPEDSMGTDEMWEMATNGLQKALD------NRGLDYVVNEGDGAFYGPKI 466

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           ++ L+D+IGR WQCGTIQ+D +LP +F+  YV    EK  PVM+HR V+GSIERFIGI+I
Sbjct: 467 DFHLRDSIGRTWQCGTIQLDMSLPEKFDLTYVGEDGEKHRPVMLHRVVYGSIERFIGILI 526

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           EN+ G  P+W++P+Q  +  IT     YA+E+   +    L +E D RNE   YKIRE  
Sbjct: 527 ENYAGAFPVWMAPVQVRILPITERHAAYAEELYKKMFDLGLRVEVDARNEKTGYKIRESQ 586

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +KK P  ++ GD+E    ++  R++G   +  + + D I ++ +
Sbjct: 587 VKKTPYTLVVGDQEMESGTVAFRKYGEKDSTVLPVADFIALVQE 630


>gi|85711636|ref|ZP_01042693.1| threonyl-tRNA synthetase [Idiomarina baltica OS145]
 gi|85694496|gb|EAQ32437.1| threonyl-tRNA synthetase [Idiomarina baltica OS145]
          Length = 638

 Score =  684 bits (1764), Expect = 0.0,   Method: Composition-based stats.
 Identities = 302/647 (46%), Positives = 424/647 (65%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS + F    +  DVA+ I   LAK  VA  I+G++ D  + +  +  I
Sbjct: 1   MPV---ITLPDGSQREFDQPVSILDVAQDIGAGLAKATVAGRIDGELVDACEMIEHDARI 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EI+TP+D   L +IRHSCAH++  A + +WP+ ++AIGP+I++GFYYD D +   + D+L
Sbjct: 58  EIVTPKDDDGLHIIRHSCAHLLGHAFKQLWPDAKMAIGPVIDNGFYYDVDVDHTLTQDDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
            ++EK+M+E+   +   +K+ +S ++ARE F  + E YKVEIL E IP   N  LY   E
Sbjct: 118 DKLEKRMKELAKTEYQVIKKKVSWQEARETFVERHEPYKVEILDEDIPTDANPGLYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +    + F K+MK+AGAYWRG+S+  ML R+YGTAW  +++L  YL  L
Sbjct: 178 YIDMCRGPHVPTMKFCQHF-KVMKMAGAYWRGNSDNKMLQRVYGTAWADKKQLKAYLQRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+EKRDHRK+ +  DLFH  E+  G++FWH  GW IF+ L  ++R K+++  Y+E+  P
Sbjct: 237 EEAEKRDHRKIGKAQDLFHWQEEAPGMVFWHHNGWTIFRELEDFVREKLREYQYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW++SGHW+ +   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+
Sbjct: 297 MMMDRVLWEKSGHWEKFSDLMFT------TSSENREYAVKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSG+LHGLMRVRGFTQDDAHVFCT++Q+ +E      ++   Y+ 
Sbjct: 351 LPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHVFCTEDQVQDEVAACIKMVYETYET 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF+KI VKLSTRPEKR+G DA WD +E  +   L          I+   L GEGAFYGP
Sbjct: 411 FGFDKIDVKLSTRPEKRLGDDATWDRSEKALADALKA------HDIDFTYLPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D +GR WQCGTIQ+DF LP R NA YV   +++  PVMIHRA+ GS+ERF+GI
Sbjct: 465 KIEFTLFDCLGRAWQCGTIQLDFALPGRLNATYVGEDNDRHTPVMIHRAILGSLERFMGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE + GN PLWL+P Q ++  IT +  +Y  ++   L    +    D RNE I +KIRE
Sbjct: 525 LIEEYAGNFPLWLAPTQVVLMNITDNQRDYVNKVVKSLNEKGIRASADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H++K++P +++ GDKE     + +R        K  L   +  L  E
Sbjct: 585 HTLKRVPYLLVVGDKEVEAGEVAVRTRSGEDLGKFPLEQFVEQLQAE 631


>gi|300691315|ref|YP_003752310.1| threonine tRNA synthetase [Ralstonia solanacearum PSI07]
 gi|299078375|emb|CBJ51025.1| threonine tRNA synthetase [Ralstonia solanacearum PSI07]
          Length = 635

 Score =  684 bits (1764), Expect = 0.0,   Method: Composition-based stats.
 Identities = 319/643 (49%), Positives = 436/643 (67%), Gaps = 15/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEII 62
            I +T PDGS + FP   T ++VA+SI   LAK A+A  I+G++ D S  + +   + I+
Sbjct: 1   MIAITLPDGSRREFPGPVTVAEVAQSIGAGLAKAALAGRIDGQLVDTSFKIEQNVDLAIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   L VIRHS AH++A AV+ ++P+ QV IGP+IE+GFYYDF  ++PF+ ++L  I
Sbjct: 61  TDKDADGLDVIRHSTAHLLAYAVKELYPDAQVTIGPVIENGFYYDFAYKRPFTPEDLVAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M E+  +D    ++    ++A +LFE   E YK EI+ SIP  + + LYR+G + DL
Sbjct: 121 EKRMAELAKKDEKVTREVWRRDEAVKLFEGMGERYKAEIIASIPEDQEIGLYREGSFVDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG++K F KLMKVAGAYWRGDSN  ML RIYGTAW  +++   YL+ LEE+E
Sbjct: 181 CRGPHVPSTGKLKVF-KLMKVAGAYWRGDSNNEMLQRIYGTAWAKKEDQEAYLHMLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLD 301
           KRDHRKL +++DLFH+ E+  G++FWH KGW+I+Q +  YMR R     Y E+ TPQV+D
Sbjct: 240 KRDHRKLGKQLDLFHLQEEAPGMVFWHPKGWEIWQAVEQYMRGRLSNAGYREVRTPQVMD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW +Y+ NMF       T  + R +A+KPMNCPGHV +FNHGL+SYR+LP+R
Sbjct: 300 RTLWEHSGHWQNYKENMFV------TESEKREYAIKPMNCPGHVQIFNHGLRSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFG+ +RNEPSG+LHGLMRVRGF QDDAH+FCT+ Q+  E    ++L  S+Y+DFGFE
Sbjct: 354 LAEFGACHRNEPSGALHGLMRVRGFVQDDAHIFCTEGQIMAEARDFNDLAFSVYEDFGFE 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + VKL+ RP+KR G+D +WD AE  ++  L          +    L GEGAFYGPK EY
Sbjct: 414 NVAVKLALRPDKRAGTDDIWDHAEEGLRTALRACG------VEWEELPGEGAFYGPKVEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDAIGR WQCGT+Q+D  LP R  A YV   + +  PVM+HRA+ GS ERF+GI++EN
Sbjct: 468 HIKDAIGRSWQCGTLQLDLVLPERLGAEYVAEDNSRKRPVMLHRAILGSFERFLGILLEN 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G LPLWL+P Q +V +I  +  EYAQ +A  L+        D RNE I YKIREHS++
Sbjct: 528 HAGALPLWLAPEQVVVMSIADAHAEYAQSVAQSLQKQGFRASADLRNEKITYKIREHSLQ 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K+P +++ GDKE     + +R  G+     + +   +  L  +
Sbjct: 588 KVPYLVVVGDKERDGNQVAVRARGNVDLGSMPVSAFVERLQND 630


>gi|257486172|ref|ZP_05640213.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC
           11528]
 gi|331010502|gb|EGH90558.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 640

 Score =  684 bits (1764), Expect = 0.0,   Method: Composition-based stats.
 Identities = 300/645 (46%), Positives = 433/645 (67%), Gaps = 18/645 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS ++F    + +DVA SI   LAK  VA  ++GK+ D  D +  + S+
Sbjct: 1   MP---TITLPDGSQRSFDHAVSVADVALSIGAGLAKATVAGKVDGKLVDACDLIENDVSL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IITP+D   L +IRHSCAH++  AV+ ++P  ++ IGP+I+DGFYYD   E+PF+ D++
Sbjct: 58  RIITPKDQEGLEIIRHSCAHLVGHAVKQLYPTAKMVIGPVIDDGFYYDIAYERPFTPDDM 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A IE++MQ++I +D   +K+     +  E+F ++ E YK+ ++E +P ++ + LY   E+
Sbjct: 118 AAIEQRMQQLIEKDYDVIKKVTPRAEVIEVFTARHEDYKLRLVEDMPNEQAMGLYYHEEY 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            D+CRGPHV +T  +K F KL K++GAYWRGD+    L R+YGTAW  +++L  Y+  +E
Sbjct: 178 VDMCRGPHVPNTRFLKSF-KLTKLSGAYWRGDAKNEQLQRVYGTAWADKKQLAAYIQRIE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+EKRDHRK+ + + LFH  E+  G++FWH +GW ++Q L  YMR+ + ++ Y EI TPQ
Sbjct: 237 EAEKRDHRKIGKRLGLFHTQEEAPGMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHW +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYREL
Sbjct: 297 VVDRSLWEKSGHWANYADNMFT------TESESRDYAIKPMNCPCHVQVFNQGLKSYREL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFG+ +RNEPSG+LHG+MRVRGFTQDDAH+FCT++QM  E      L + +Y DF
Sbjct: 351 PMRLAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEDQMQAESAAFIKLTLDVYADF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+ I +KLSTRPEKRVGSD LWD AE  +   LD+        +   +  GEGAFYGPK
Sbjct: 411 GFKDIELKLSTRPEKRVGSDELWDRAETALASALDSAG------LPYDLQPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD +GR WQCGT+Q+DFNLP R +A YV+  + + +PVM+HRA+ GS ERFIGI+
Sbjct: 465 IEFSLKDCLGRVWQCGTLQLDFNLPIRLSAEYVSEDNSRKNPVMLHRAILGSFERFIGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+++G  P WL+P QA++  IT    ++A E+   L       ++D RNE I +KIREH
Sbjct: 525 IEHYEGAFPAWLAPTQAVIMNITDKQADFALEVEKTLAESGFRAKSDLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           ++ K+P +++ GD+E   +++ +R         + +      L +
Sbjct: 585 TLLKVPYLLVIGDREVEMQTVAVRTREGADLGSMPVAQFAEFLAQ 629


>gi|159043329|ref|YP_001532123.1| threonyl-tRNA synthetase [Dinoroseobacter shibae DFL 12]
 gi|189083606|sp|A8LQX9|SYT_DINSH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|157911089|gb|ABV92522.1| threonyl-tRNA synthetase [Dinoroseobacter shibae DFL 12]
          Length = 654

 Score =  683 bits (1763), Expect = 0.0,   Method: Composition-based stats.
 Identities = 331/653 (50%), Positives = 447/653 (68%), Gaps = 10/653 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           + I LTFPDG+ ++F    T ++VA SIS SL KKA++  +NG   DL  P+  + SI I
Sbjct: 2   AQISLTFPDGNARDFDAGVTPAEVAASISTSLGKKAISATVNGAHHDLQWPIDADASIAI 61

Query: 62  ITPEDP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            T +D  ++L +IRH CAHIMA AVQ IWP+V+V IGP+IE+GFYYDFD+ +PF+ ++L 
Sbjct: 62  HTLKDDAQALELIRHDCAHIMARAVQEIWPDVKVTIGPVIENGFYYDFDRAEPFTPEDLG 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IE KM+EII    P   +     +A   +E+  E YKVE++E+IP  E + +Y  G+W 
Sbjct: 122 AIEAKMKEIINARDPVRTEVWDRPRAIAHYEANGEPYKVELIEAIPGNEPLRMYWHGDWQ 181

Query: 181 DLCRGPHVRSTGQ-VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           DLCRGPH++ TGQ     FKLM VAGAYWRGDS+RPML RIYG A+  +  L ++L+ LE
Sbjct: 182 DLCRGPHLQHTGQVPADSFKLMSVAGAYWRGDSSRPMLQRIYGVAFQNRDALKKHLHMLE 241

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+ KRDHRKL REM+LFH+ E+  G +FWH  GW ++ TL  YMRR+ ++  Y E+NTPQ
Sbjct: 242 EAAKRDHRKLGREMNLFHMQEEAPGQVFWHPNGWTVYTTLQDYMRRRQRENGYVEVNTPQ 301

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW+ SGHWD Y+ NMF V+  ++  ++    ALKPMNCP HV V+N GLKSYR+L
Sbjct: 302 VVDRKLWEASGHWDKYQENMFIVEVDEEHAREKAINALKPMNCPCHVQVYNQGLKSYRDL 361

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG+  R EPSG+LHGLMRVRGFTQDDAH+FCT++Q+ +E  +   ++ +IY+D 
Sbjct: 362 PLRMAEFGACNRYEPSGALHGLMRVRGFTQDDAHIFCTEDQIQDETARFIRMLSTIYRDL 421

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE   +K STRPE R GSDA+WD AE  ++  + T+ +      +  +  GEGAFYGPK
Sbjct: 422 GFESFDIKFSTRPEVRAGSDAVWDKAEAALEAAIRTVTD------DFELDPGEGAFYGPK 475

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++ L DAIGR+WQ GT Q DF LP R +A Y+     K  PVM+HRA+ GS ERF+GI+
Sbjct: 476 LDFKLTDAIGREWQLGTFQADFVLPERLDATYIGEDGAKHRPVMLHRAILGSFERFLGIL 535

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IENF G LP WL+P Q +V +I S A +Y +E+   L    +  E D RNE INYK+REH
Sbjct: 536 IENFAGKLPFWLAPRQVVVASIISEADDYVREVVAALTRAGIRAEADIRNEKINYKVREH 595

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           S+ K+P+I+  G +E  ER++ +RR G   T  V L   +  L  E+ PPD +
Sbjct: 596 SVGKVPVILAVGRREMEERTVTLRRLGEKQTSVVGLDALVADLAAEATPPDQR 648


>gi|94499191|ref|ZP_01305729.1| threonyl-tRNA synthetase [Oceanobacter sp. RED65]
 gi|94428823|gb|EAT13795.1| threonyl-tRNA synthetase [Oceanobacter sp. RED65]
          Length = 638

 Score =  683 bits (1763), Expect = 0.0,   Method: Composition-based stats.
 Identities = 310/649 (47%), Positives = 437/649 (67%), Gaps = 20/649 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS + F    +  DVA  I   LAK  +A  ++G++ D  D +  +  +
Sbjct: 1   MPV---ITLPDGSQRAFDEAVSVLDVANDIGPGLAKATIAGEVDGQLIDACDKIEHDAQL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L ++RHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D + P + +EL
Sbjct: 58  RIITAKDEEGLEILRHSCAHLLGHAIKQLWPQTKMAIGPVIDNGFYYDVDADFPINEEEL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
            Q+EK+M E+     P +K+ +S + AR+ FE + E+YK+EIL E+IP      LY   E
Sbjct: 118 KQLEKRMNELAKTSYPVVKEVVSWQTARDTFEKRGESYKMEILDENIPKDSTPALYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +    + F KLMKVAGAYWRGDS+  ML RIYGTAW  ++ L  YL  L
Sbjct: 178 YIDMCRGPHVPNMKFCQNF-KLMKVAGAYWRGDSDNKMLQRIYGTAWADKKALKAYLQRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+EKRDHRKL + +DLFH  E+  G++FWH KGW I+  L  YMR+K+ +  YEE+  P
Sbjct: 237 EEAEKRDHRKLGKALDLFHWQEEAPGMVFWHSKGWTIYNILEDYMRKKLVEYQYEEVRAP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            V+D  +W++SGHWD Y+ N+FA      T  + RT+A+KPMNCPGH+ +FN GLKSYR+
Sbjct: 297 MVMDVSMWEKSGHWDKYQDNIFA------TESEKRTYAVKPMNCPGHLQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP R+AEFG V+RNEPSGSLHGLMRVR FTQDDAHVFCT+EQ+  E  K   ++  +YKD
Sbjct: 351 LPYRMAEFGIVHRNEPSGSLHGLMRVRSFTQDDAHVFCTEEQILEEVTKCIQMVFDVYKD 410

Query: 418 FGFEKIM-VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           FGF++ + VKLSTRPEKR+GSD +WD AE  +   L        + ++  +  GEGAFYG
Sbjct: 411 FGFDQNLSVKLSTRPEKRIGSDEIWDKAEKGLADALKA------NELDYEIQEGEGAFYG 464

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK E+ L D + R WQCGTIQ+DF++P R  A YV+ + ++  PVMIHRA+ GS+ERFIG
Sbjct: 465 PKIEFTLFDCLDRAWQCGTIQLDFSMPGRLGAQYVDENGDRQTPVMIHRAILGSLERFIG 524

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           I+IE++ G LP WL+P QA++  IT +  +Y +++   L      +++D RNE I +KIR
Sbjct: 525 ILIEHYAGALPTWLAPTQAMIMNITDNQADYVKKVQQTLAKQGFRVDSDLRNEKIGFKIR 584

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           EH+++K+P +++ GDKE +  ++ +R         +SL D   +L  E+
Sbjct: 585 EHTLQKVPYLLVTGDKEVASDAVAVRTRSGEDLGTMSLEDFAKLLESEN 633


>gi|238895235|ref|YP_002919970.1| threonyl-tRNA synthetase [Klebsiella pneumoniae NTUH-K2044]
 gi|238547552|dbj|BAH63903.1| threonyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
          Length = 642

 Score =  683 bits (1763), Expect = 0.0,   Method: Composition-based stats.
 Identities = 299/655 (45%), Positives = 434/655 (66%), Gaps = 19/655 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS ++F    +  DVA  I   LAK  +A  +NG++ D  DP+  + ++
Sbjct: 1   MPV---ITLPDGSQRHFDHAVSPMDVALDIGPGLAKATIAGRVNGELVDACDPIESDSTL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L +IRHSCAH++  A++ +WP  ++AIGP++++GFYYD D +   + +++
Sbjct: 58  SIITAKDEEGLEIIRHSCAHLLGHAIKQLWPNTKMAIGPVVDNGFYYDVDLDHTLTQEDI 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M E+  ++   +K+ +S  +ARE F  + E+YKV IL E+I   +   LY   E
Sbjct: 118 DALEKRMHELAEKNYDVIKKKVSWHEARETFVKRGESYKVSILDENIAHDDKPGLYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KLMK AGAYWRGDSN  ML RIYGTAW  ++ L  YL  L
Sbjct: 178 YIDMCRGPHVPNMRFCHHF-KLMKTAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF+ L +++R K+K+  Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELETFVRSKLKEYQYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW+++GHWD+Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 297 FMMDRVLWEKTGHWDNYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT++Q+ +E      ++  +Y  
Sbjct: 351 LPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEDQVRDEVNACIRMVYDMYST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI+VKLSTRPEKR+GSD  WD AE  +   L+      ++ I     LGEGAFYGP
Sbjct: 411 FGFEKIVVKLSTRPEKRIGSDETWDRAEADLAVALE------ENNIPFEYQLGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF+LP R +A YV  ++E+  PVMIHRA+ GS+ERFIGI
Sbjct: 465 KIEFTLYDCLDRAWQCGTVQLDFSLPQRLSASYVGENNERQVPVMIHRAILGSLERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E F G  P W++P+Q +V  IT S  EY  E+   L++  + ++ D RNE I +KIRE
Sbjct: 525 LTEEFAGFFPTWIAPVQVVVMNITDSQAEYVNELTRKLQNAGIRVKADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           H+++++P +++CGDKE     + +R         + + + I  L +E      Q+
Sbjct: 585 HTLRRVPYMLVCGDKEVEAGKVAVRTRRGKDLGSMDVNEVIEKLQQEIRSRSLQQ 639


>gi|293392211|ref|ZP_06636545.1| threonyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D7S-1]
 gi|290952745|gb|EFE02864.1| threonyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D7S-1]
          Length = 643

 Score =  683 bits (1763), Expect = 0.0,   Method: Composition-based stats.
 Identities = 298/648 (45%), Positives = 425/648 (65%), Gaps = 16/648 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPE 65
           +T PDGS + F    T  +VA+ I   LAK  +A  +NG+  D  D + E S + IIT +
Sbjct: 4   ITLPDGSQRQFDKPVTVLEVAQDIGAGLAKATIAGRVNGERKDACDLITEDSRVAIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHS AH++  A++ ++P V++AIGP I++GFYYD D ++  + ++L  +EK+
Sbjct: 64  DEDGLEIIRHSTAHLLGHAIKQLFPNVKMAIGPTIDNGFYYDVDLDRSLTQEDLDALEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K  +S ++AR+ F  + E YK+ IL E+I       LY   E+ D+CR
Sbjct: 124 MLELAKTNYDVIKTPVSWQEARDTFGKRGEPYKMAILDENIERTATPALYHHQEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +      F KL K+AGAYWRGDS   ML RIYGTAW  +++L  YL+ LEE+ KR
Sbjct: 184 GPHVPNMRFCHHF-KLQKIAGAYWRGDSKNKMLQRIYGTAWADKKQLEAYLHRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQH 303
           DHRK+ + +DL+H+ E+  G++FWH  GW IF+ L +++R K+ + DY+E+  P ++D+ 
Sbjct: 243 DHRKIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW +Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWQNYGDLMFT------TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FC  +Q+ +E      ++  IY  FGFE I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCMPDQVESEVTSCIKMVYDIYSTFGFENI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPEKR+GSD +WD AE  +   L+       + ++  +  GEGAFYGPK E+ L
Sbjct: 417 KVKLSTRPEKRIGSDEMWDKAEADLAKALEH------NGLSYEIQEGEGAFYGPKLEFAL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D++ R+WQCGTIQ+DF LP R NA YV   +E+  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 TDSLDREWQCGTIQLDFFLPERLNASYVGEDNERKIPVMIHRAILGSIERFIGIITEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P+WL+P QA+V  IT S  EY Q++A  L    L ++TD RNE + +KIREH++ ++
Sbjct: 531 GFFPVWLAPTQAVVMNITDSQSEYVQKVAKQLSDAGLRVKTDLRNEKVGFKIREHTLHRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           P +++CGDKE     + +R          ++ + + IL K+    + +
Sbjct: 591 PYMLVCGDKEIEAGKVAVRTRKGQDLGTFTVEEFLDILKKQVRNRELK 638


>gi|168233251|ref|ZP_02658309.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|194472380|ref|ZP_03078364.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194458744|gb|EDX47583.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|205332671|gb|EDZ19435.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
          Length = 642

 Score =  683 bits (1763), Expect = 0.0,   Method: Composition-based stats.
 Identities = 301/655 (45%), Positives = 435/655 (66%), Gaps = 19/655 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D SD +  + ++
Sbjct: 1   MPV---ITLPDGSQRHYDHPVSPMDVALDIGPGLAKATIAGRVNGELVDASDLIENDATL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L +IRHSCAH++  A++ +WP  ++AIGP++++GFYYD D ++  + +++
Sbjct: 58  SIITAKDEEGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVVDNGFYYDVDLDRTLTQEDV 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M E+  ++   +K+ +S  +ARE F  + E+YKV IL E+I   +   LY   E
Sbjct: 118 EALEKRMHELAEKNYDVIKKKVSWHEARETFVKRGESYKVAILDENIAHDDKPGLYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KLMK AGAYWRGDSN  ML RIYGTAW  ++ L  YL  L
Sbjct: 178 YVDMCRGPHVPNMRFCHHF-KLMKTAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF+ L  ++R K+K+  Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW+++GHWD+Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 297 FMMDRVLWEKTGHWDNYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  
Sbjct: 351 LPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQIRDEVNACIRMVYDMYST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI+VKLSTRP+KR+GSD +WD AE  +   L+      ++ I     LGEGAFYGP
Sbjct: 411 FGFEKIVVKLSTRPDKRIGSDEMWDRAEADLAVALE------ENNIPFEYQLGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF+LPSR +A YV   +E+  PVMIHRA+ GS+ERFIGI
Sbjct: 465 KIEFTLYDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E F G  P WL+P+Q +V  IT S  EY  E+   L++  + ++ D RNE I +KIRE
Sbjct: 525 LTEEFAGFFPTWLAPVQVVVMNITDSQSEYVNELTQKLQNAGIRVKADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           H+++++P +++CGDKE     + +R         + + D I  L +E      Q+
Sbjct: 585 HTLRRVPYMLVCGDKEVEAGKVAVRTRRGKDLGSLDVNDVIEKLQQEIRSRSLQQ 639


>gi|16760562|ref|NP_456179.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|29141677|ref|NP_805019.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|167552305|ref|ZP_02346058.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|168239001|ref|ZP_02664059.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|168821978|ref|ZP_02833978.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|194736705|ref|YP_002114350.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|197251550|ref|YP_002146704.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|200390235|ref|ZP_03216846.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|204927743|ref|ZP_03218944.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|213423451|ref|ZP_03356434.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E01-6750]
 gi|213426331|ref|ZP_03359081.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E02-1180]
 gi|213852224|ref|ZP_03381756.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
 gi|238910851|ref|ZP_04654688.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Tennessee str. CDC07-0191]
 gi|22654121|sp|Q8Z6I2|SYT_SALTI RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|238690055|sp|B5F7G2|SYT_SALA4 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|238693694|sp|B4TUF0|SYT_SALSV RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|25292951|pir||AC0706 threonine-tRNA ligase (EC 6.1.1.3) - Salmonella enterica subsp.
           enterica serovar Typhi (strain CT18)
 gi|16502858|emb|CAD02020.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29137305|gb|AAO68868.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|194712207|gb|ACF91428.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|197215253|gb|ACH52650.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197288252|gb|EDY27637.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|199602680|gb|EDZ01226.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|204323085|gb|EDZ08281.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|205323017|gb|EDZ10856.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|205341550|gb|EDZ28314.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|320086187|emb|CBY95961.1| Threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. 2007-60-3289-1]
 gi|322620023|gb|EFY16896.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-1]
 gi|322622333|gb|EFY19178.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-3]
 gi|322627857|gb|EFY24647.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-4]
 gi|322633045|gb|EFY29788.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-1]
 gi|322636709|gb|EFY33412.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-2]
 gi|322641265|gb|EFY37906.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 531954]
 gi|322645254|gb|EFY41783.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. NC_MB110209-0054]
 gi|322650195|gb|EFY46609.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. OH_2009072675]
 gi|322655769|gb|EFY52071.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. CASC_09SCPH15965]
 gi|322660095|gb|EFY56334.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 19N]
 gi|322665338|gb|EFY61526.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 81038-01]
 gi|322669596|gb|EFY65744.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MD_MDA09249507]
 gi|322673522|gb|EFY69624.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 414877]
 gi|322677448|gb|EFY73512.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 366867]
 gi|322679887|gb|EFY75926.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 413180]
 gi|322687359|gb|EFY83331.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 446600]
 gi|323192477|gb|EFZ77707.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609458-1]
 gi|323198668|gb|EFZ83769.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556150-1]
 gi|323204096|gb|EFZ89110.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609460]
 gi|323208715|gb|EFZ93653.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 507440-20]
 gi|323210228|gb|EFZ95127.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556152]
 gi|323217691|gb|EGA02406.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB101509-0077]
 gi|323220245|gb|EGA04700.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB102109-0047]
 gi|323223489|gb|EGA07815.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB110209-0055]
 gi|323229493|gb|EGA13616.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB111609-0052]
 gi|323232716|gb|EGA16812.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009083312]
 gi|323240245|gb|EGA24289.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009085258]
 gi|323242767|gb|EGA26788.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315731156]
 gi|323249083|gb|EGA33002.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2009159199]
 gi|323254416|gb|EGA38233.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008282]
 gi|323255600|gb|EGA39356.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008283]
 gi|323260123|gb|EGA43748.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008284]
 gi|323267113|gb|EGA50598.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008285]
 gi|323271563|gb|EGA54984.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008287]
          Length = 642

 Score =  683 bits (1762), Expect = 0.0,   Method: Composition-based stats.
 Identities = 301/655 (45%), Positives = 435/655 (66%), Gaps = 19/655 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D SD +  + ++
Sbjct: 1   MPV---ITLPDGSQRHYDHPVSPMDVALDIGPGLAKATIAGRVNGELVDASDLIENDATL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L +IRHSCAH++  A++ +WP  ++AIGP++++GFYYD D ++  + +++
Sbjct: 58  SIITAKDEEGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVVDNGFYYDVDLDRTLTQEDV 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M E+  ++   +K+ +S  +ARE F  + E+YKV IL E+I   +   LY   E
Sbjct: 118 EALEKRMHELAEKNYDVIKKKVSWHEARETFVKRGESYKVSILDENIAHDDKPGLYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KLMK AGAYWRGDSN  ML RIYGTAW  ++ L  YL  L
Sbjct: 178 YVDMCRGPHVPNMRFCHHF-KLMKTAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF+ L  ++R K+K+  Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW+++GHWD+Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 297 FMMDRVLWEKTGHWDNYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  
Sbjct: 351 LPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQIRDEVNACIRMVYDMYST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI+VKLSTRP+KR+GSD +WD AE  +   L+      ++ I     LGEGAFYGP
Sbjct: 411 FGFEKIVVKLSTRPDKRIGSDEMWDRAEADLAVALE------ENNIPFEYQLGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF+LPSR +A YV   +E+  PVMIHRA+ GS+ERFIGI
Sbjct: 465 KIEFTLYDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E F G  P WL+P+Q +V  IT S  EY  E+   L++  + ++ D RNE I +KIRE
Sbjct: 525 LTEEFAGFFPTWLAPVQVVVMNITDSQSEYVNELTQKLQNAGIRVKADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           H+++++P +++CGDKE     + +R         + + D I  L +E      Q+
Sbjct: 585 HTLRRVPYMLVCGDKEVEAGKVAVRTRRGKDLGSLDVNDVIEKLQQEIRSRSLQQ 639


>gi|161614260|ref|YP_001588225.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi B str. SPB7]
 gi|194446059|ref|YP_002040590.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|198243456|ref|YP_002215793.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|207857160|ref|YP_002243811.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|189083620|sp|A9N243|SYT_SALPB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|238690315|sp|B5FJA8|SYT_SALDC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|238690400|sp|B5QVW8|SYT_SALEP RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|238693615|sp|B4T4M8|SYT_SALNS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|161363624|gb|ABX67392.1| hypothetical protein SPAB_02005 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194404722|gb|ACF64944.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|197937972|gb|ACH75305.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|206708963|emb|CAR33293.1| Threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
          Length = 642

 Score =  683 bits (1762), Expect = 0.0,   Method: Composition-based stats.
 Identities = 301/655 (45%), Positives = 433/655 (66%), Gaps = 19/655 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D SD +  + ++
Sbjct: 1   MPV---ITLPDGSQRHYDHPVSPMDVALDIGPGLAKATIAGRVNGELVDASDLIENDATL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L +IRHSCAH++  A++ +WP  ++AIGP++++GFYYD D ++  + +++
Sbjct: 58  AIITAKDEEGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVVDNGFYYDVDLDRTLTQEDV 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M E+  ++   +K+ +S   ARE F  + E YKV IL E+I   +   LY   E
Sbjct: 118 EALEKRMHELAEKNYDVIKKKVSWHDARETFVKRGETYKVAILDENIAHDDKPGLYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KLMK AGAYWRGDSN  ML RIYGTAW  ++ L  YL  L
Sbjct: 178 YVDMCRGPHVPNMRFCHHF-KLMKTAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF+ L  ++R K+K+  Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW+++GHWD+Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 297 FMMDRVLWEKTGHWDNYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  
Sbjct: 351 LPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQIRDEVNACIRMVYDMYST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI+VKLSTRP+KR+GSD +WD AE  +   L+      ++ I     LGEGAFYGP
Sbjct: 411 FGFEKIVVKLSTRPDKRIGSDEMWDRAEADLAVALE------ENNIPFEYQLGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF+LPSR +A YV   +E+  PVMIHRA+ GS+ERFIGI
Sbjct: 465 KIEFTLYDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E F G  P WL+P+Q +V  IT S  EY  E+   L++  + ++ D RNE I +KIRE
Sbjct: 525 LTEEFAGFFPTWLAPVQVVVMNITDSQSEYVNELTQKLQNAGIRVKADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           H+++++P +++CGDKE     + +R         + + D I  L +E      Q+
Sbjct: 585 HTLRRVPYMLVCGDKEVEAGKVAVRTRRGKDLGSLDVNDVIEKLQQEIRSRSLQQ 639


>gi|329849735|ref|ZP_08264581.1| threonyl-tRNA synthetase [Asticcacaulis biprosthecum C19]
 gi|328841646|gb|EGF91216.1| threonyl-tRNA synthetase [Asticcacaulis biprosthecum C19]
          Length = 640

 Score =  683 bits (1762), Expect = 0.0,   Method: Composition-based stats.
 Identities = 323/648 (49%), Positives = 440/648 (67%), Gaps = 14/648 (2%)

Query: 8   TFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPED 66
           TFPDG++++F    TG  +AES+S+SLAKKAV + ++G + DL   +  G  ++I+T E 
Sbjct: 2   TFPDGAVRSFERGTTGRQIAESLSKSLAKKAVLIKLDGALLDLDRQLENGGRLDILTREA 61

Query: 67  PRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKM 126
           P  L VIRH  AHI+AEAVQ ++P  QV IGP I+DGFYYDF +++PFS+D+  +IE KM
Sbjct: 62  PEVLEVIRHDTAHILAEAVQELFPGTQVTIGPAIDDGFYYDFARDEPFSTDDFPKIEAKM 121

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE-WFDLCRG 185
           +EI+ RD    ++      A   FES  E YK EI+  +P  E++++Y  G+ W DLC G
Sbjct: 122 REIVDRDEKIRREVWDRNHAIAHFESIGEKYKAEIIRDLPESEDISVYFHGDAWKDLCLG 181

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PH+ S+  + K FKL K+AGAYWRGD N   L RIYGTAW+++ +L  Y+  +EE+EKRD
Sbjct: 182 PHLPSSKFIGKAFKLTKLAGAYWRGDHNNAQLQRIYGTAWSSEADLEAYIQRIEEAEKRD 241

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHL 304
           HRK+ R MDLFH+ E+G G++FWH KGW +++ L +YMRR++    Y E+ TPQVLD+  
Sbjct: 242 HRKIGRAMDLFHMQEEGRGMVFWHPKGWVLWRVLEAYMRRRLDASGYVEVKTPQVLDRSF 301

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W+QSGHW+ YRANMF  +       +  T +LKPMNCPGHV +F  GL+SY+ELP+R+AE
Sbjct: 302 WEQSGHWEKYRANMFVCETV-----EGETLSLKPMNCPGHVQIFKVGLRSYKELPIRMAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FG+ +R EPSGSLHGLMRVRGFTQDDAH+FC ++Q+  E  K   L   I+ D G E   
Sbjct: 357 FGACHRYEPSGSLHGLMRVRGFTQDDAHIFCREDQIVEETAKFVRLTKLIHADLGMETAY 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           + L+TRPE R GSDA WD AE ++           Q  +   +  G+GAFY PK ++I+K
Sbjct: 417 INLATRPEIRAGSDAFWDKAEGMLAEAAK------QAGVEPVIAEGDGAFYAPKLDFIVK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           DAIGR+W CGT+Q+D+ LP R +A YV     +  PVM+HRA+ GS ERFIGIMIENF G
Sbjct: 471 DAIGREWTCGTLQLDYVLPERLDAEYVAEDGSRQRPVMLHRAILGSFERFIGIMIENFAG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             PLWL+P+Q +V  ITS A  YA+++   L++  L +E D RNE INYK+REHS+ K+P
Sbjct: 531 KFPLWLAPVQVVVAPITSDANPYAEKVTQSLRAAGLRVEADLRNEKINYKVREHSVAKVP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           +I + G KEA    + +R  GS     +SL DA+  L  ++ PPD ++
Sbjct: 591 VIAVVGRKEAETGEVALRFLGSDGQTILSLADAVQRLQTDATPPDLKQ 638


>gi|16764684|ref|NP_460299.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|167991842|ref|ZP_02572941.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|168244449|ref|ZP_02669381.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|194448321|ref|YP_002045340.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|197262906|ref|ZP_03162980.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|22654123|sp|Q8ZPS9|SYT_SALTY RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|238690646|sp|B4TGH1|SYT_SALHS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|16419852|gb|AAL20258.1| threonine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|194406625|gb|ACF66844.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|197241161|gb|EDY23781.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|205329759|gb|EDZ16523.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|205336802|gb|EDZ23566.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|261246542|emb|CBG24352.1| ThrRS [Salmonella enterica subsp. enterica serovar Typhimurium str.
           D23580]
 gi|267993213|gb|ACY88098.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
 gi|301157870|emb|CBW17364.1| Threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312912318|dbj|BAJ36292.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. T000240]
 gi|321223961|gb|EFX49024.1| Threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
 gi|323129604|gb|ADX17034.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
 gi|332988221|gb|AEF07204.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. UK-1]
          Length = 642

 Score =  683 bits (1762), Expect = 0.0,   Method: Composition-based stats.
 Identities = 301/655 (45%), Positives = 433/655 (66%), Gaps = 19/655 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D SD +  + ++
Sbjct: 1   MPV---ITLPDGSQRHYDHPVSPMDVALDIGPGLAKATIAGRVNGELVDASDLIENDATL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L +IRHSCAH++  A++ +WP  ++AIGP++++GFYYD D ++  + +++
Sbjct: 58  SIITAKDEEGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVVDNGFYYDVDLDRTLTQEDV 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M E+  ++   +K+ +S   ARE F  + E YKV IL E+I   +   LY   E
Sbjct: 118 EALEKRMHELAEKNYDVIKKKVSWHDARETFVKRGETYKVAILDENIAHDDKPGLYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KLMK AGAYWRGDSN  ML RIYGTAW  ++ L  YL  L
Sbjct: 178 YVDMCRGPHVPNMRFCHHF-KLMKTAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF+ L  ++R K+K+  Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW+++GHWD+Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 297 FMMDRVLWEKTGHWDNYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  
Sbjct: 351 LPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQIRDEVNACIRMVYDMYST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI+VKLSTRP+KR+GSD +WD AE  +   L+      ++ I     LGEGAFYGP
Sbjct: 411 FGFEKIVVKLSTRPDKRIGSDEMWDRAEADLAVALE------ENNIPFEYQLGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF+LPSR +A YV   +E+  PVMIHRA+ GS+ERFIGI
Sbjct: 465 KIEFTLYDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E F G  P WL+P+Q +V  IT S  EY  E+   L++  + ++ D RNE I +KIRE
Sbjct: 525 LTEEFAGFFPTWLAPVQVVVMNITDSQSEYVNELTQKLQNAGIRVKADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           H+++++P +++CGDKE     + +R         + + D I  L +E      Q+
Sbjct: 585 HTLRRVPYMLVCGDKEVEAGKVAVRTRRGKDLGSLDVNDVIEKLQQEIRSRSLQQ 639


>gi|206580341|ref|YP_002237974.1| threonyl-tRNA synthetase [Klebsiella pneumoniae 342]
 gi|288934884|ref|YP_003438943.1| threonyl-tRNA synthetase [Klebsiella variicola At-22]
 gi|290509026|ref|ZP_06548397.1| threonyl-tRNA synthetase [Klebsiella sp. 1_1_55]
 gi|238065116|sp|B5XQC6|SYT_KLEP3 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|206569399|gb|ACI11175.1| threonyl-tRNA synthetase [Klebsiella pneumoniae 342]
 gi|288889593|gb|ADC57911.1| threonyl-tRNA synthetase [Klebsiella variicola At-22]
 gi|289778420|gb|EFD86417.1| threonyl-tRNA synthetase [Klebsiella sp. 1_1_55]
          Length = 642

 Score =  683 bits (1762), Expect = 0.0,   Method: Composition-based stats.
 Identities = 299/655 (45%), Positives = 433/655 (66%), Gaps = 19/655 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS ++F    +  DVA  I   LAK  +A  +NG++ D  DP+  + ++
Sbjct: 1   MPV---ITLPDGSQRHFDHAVSPMDVALDIGPGLAKATIAGRVNGELVDACDPIETDSTL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L +IRHSCAH++  A++ +WP  ++AIGP++++GFYYD D +   + +++
Sbjct: 58  SIITAKDEEGLEIIRHSCAHLLGHAIKQLWPNTKMAIGPVVDNGFYYDVDLDHTLTQEDI 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M E+  ++   +K+ +S  +ARE F  + E YKV IL E+I   +   LY   E
Sbjct: 118 DALEKRMHELAEKNYDVIKKKVSWHEARETFVKRGETYKVSILDENIAHDDKPGLYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KLMK AGAYWRGDSN  ML RIYGTAW  ++ L  YL  L
Sbjct: 178 YIDMCRGPHVPNMRFCHHF-KLMKTAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF+ L +++R K+K+  Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELETFVRSKLKEYQYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW+++GHWD+Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 297 FMMDRVLWEKTGHWDNYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT++Q+ +E      ++  +Y  
Sbjct: 351 LPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEDQVRDEVNACIRMVYDMYST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI+VKLSTRPEKR+GSD  WD AE  +   L+      ++ I     LGEGAFYGP
Sbjct: 411 FGFEKIVVKLSTRPEKRIGSDETWDRAEADLAVALE------ENNIPFEYQLGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF+LP R +A YV  ++E+  PVMIHRA+ GS+ERFIGI
Sbjct: 465 KIEFTLYDCLDRAWQCGTVQLDFSLPQRLSASYVGENNERQVPVMIHRAILGSLERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E F G  P W++P+Q +V  IT S  EY  E+   L++  + ++ D RNE I +KIRE
Sbjct: 525 LTEEFAGFFPTWIAPVQVVVMNITDSQAEYVNELTRKLQNAGIRVKADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           H+++++P +++CGDKE     + +R         + + + I  L +E      Q+
Sbjct: 585 HTLRRVPYMLVCGDKEVEAGKVAVRTRRGKDLGSMDVSEVIEKLQQEIRSRSLQQ 639


>gi|258515613|ref|YP_003191835.1| threonyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
 gi|257779318|gb|ACV63212.1| threonyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
          Length = 634

 Score =  683 bits (1761), Expect = 0.0,   Method: Composition-based stats.
 Identities = 282/643 (43%), Positives = 400/643 (62%), Gaps = 16/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEII 62
            IK++  DGS + +    T   VAE IS  LA+ A+A  INGK  DLS  + +  S+EI+
Sbjct: 1   MIKVSLKDGSTREYEPGITIIQVAEDISPGLARSALAGKINGKAVDLSTALEDNVSLEIL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T  DP    + RHS +H++A+AVQ ++P  ++AIGP I+DGFYYDFD E  F+  ++ +I
Sbjct: 61  TFNDPEGQEIYRHSSSHVLAQAVQRLFPGTKLAIGPAIKDGFYYDFDSEHKFTPADMEKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M +II  + PF +  LS  +A + F    E YKVE++  +P    ++ Y QG W DL
Sbjct: 121 EAEMNKIIKENQPFKRFELSRAEAIDKFTDLDEKYKVELINDLPGDAVISCYEQGGWCDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPHV STG +K   KL  +AGAYWRG     ML R YGT++  +  L +++  +EE++
Sbjct: 181 CAGPHVPSTGSLK-AVKLTSLAGAYWRGSEKNKMLQRFYGTSFPKKALLDEHINRIEEAK 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD 301
           +RDHRKL  E++LF + E+G G  F+H KG  +   L  + R++ +   Y+EI TP +L+
Sbjct: 240 RRDHRKLGAELELFSVMEEGPGFPFFHPKGMILRNELEKFWRQEHEKRGYQEIRTPIILN 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+QSGHWD Y+ NM+  +       D   FA+KPMNCPG + ++   L SYRE P+R
Sbjct: 300 RVLWEQSGHWDHYKENMYFTQI------DNFDFAVKPMNCPGSMLIYKSKLHSYREFPIR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           + E G V+R+E SG LHGLMRVR FTQDDAH+F    Q+ +E + + +L+   Y  FGF+
Sbjct: 354 MGELGLVHRHELSGVLHGLMRVRCFTQDDAHIFMLPGQVKDEIIGVIDLVDDFYSIFGFK 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LST+PEK +GSD +WD A N +K  ++         ++  V  G+GAFYGPK ++
Sbjct: 414 YH-VELSTKPEKAMGSDEVWDMATNTLKEAIEA------KGLDYKVNEGDGAFYGPKIDF 466

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L+D +GR WQCGTIQ+DF +P +F+  YV    +K  PVM+HR VFGSIERFIGI+ E+
Sbjct: 467 HLEDCLGRTWQCGTIQLDFLMPEKFDLSYVGEDGQKHRPVMLHRVVFGSIERFIGILTEH 526

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           F G  P WL+P+Q  V  IT    +YA  + + LK   + +E D RNE I YKIRE   +
Sbjct: 527 FAGAFPTWLAPVQVRVLPITDRQSDYAVRVVDRLKETGIRVELDQRNEKIGYKIREAQTQ 586

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIP +++ GDKE  +  + IR          +L D I  L +E
Sbjct: 587 KIPYMLVIGDKELEKELVAIRHRSQGDLGISTLEDFIDKLQEE 629


>gi|299771535|ref|YP_003733561.1| threonyl-tRNA synthetase [Acinetobacter sp. DR1]
 gi|298701623|gb|ADI92188.1| threonyl-tRNA synthetase [Acinetobacter sp. DR1]
          Length = 640

 Score =  683 bits (1761), Expect = 0.0,   Method: Composition-based stats.
 Identities = 300/638 (47%), Positives = 428/638 (67%), Gaps = 15/638 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T P+G  K+F    +  +VA+SI   LAK  VA  +N ++ D  D +  + +++IITP+
Sbjct: 4   ITLPNGDQKSFDHAVSVMEVAQSIGPGLAKNTVAGRVNDRLVDACDLITEDSTLQIITPK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  AV+ ++PE ++ IGP+IE+GFYYD    +PF+ D++A IE++
Sbjct: 64  DEEGLEIIRHSCAHLVGHAVKQLFPEAKMVIGPVIEEGFYYDIWMPRPFTLDDMAAIEER 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+++I +D   +K+    ++    F ++ E YK+ ++  +P +  + LY   ++ D+CRG
Sbjct: 124 MKKLIDQDYDVVKKMTPRDEVIAEFTARGEEYKLRLIADMPEETQMGLYYHQDYLDMCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +T  +K F KL K++GAYWRGD+    L RIYGTAW  +++L  Y+  +EE+EKRD
Sbjct: 184 PHVPNTKFLKSF-KLTKISGAYWRGDAKNEQLQRIYGTAWADKKQLAAYIKRIEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHL 304
           HRK+ + +DLFH+ E+  G++FWH  GW I+Q L  YMR+ +  + Y EI TPQ++D  L
Sbjct: 243 HRKIGKALDLFHMQEEAPGMVFWHPNGWTIYQVLEQYMRKVQQDNGYLEIKTPQIVDFTL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGH  +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYR+LP+RLAE
Sbjct: 303 WEKSGHAANYADNMFT------THSESRNYAVKPMNCPCHVQVFNQGLKSYRDLPIRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNEPSGSLHG+MRVRGFTQDDAH+FCTKEQ+  E      L + +YKDFGFE++ 
Sbjct: 357 FGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTKEQIGQEVADFIKLTLDVYKDFGFEEVQ 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +KLSTRPEKRVG DALWD AE  +   LD         +   +  GEGAFYGPK E+ LK
Sbjct: 417 MKLSTRPEKRVGDDALWDMAEKSLADALDAAG------LEWELQPGEGAFYGPKIEFSLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D +GR WQCGTIQ DFNLP R +A YV   +++  PVM+HRA+ GS ERFIGI+IE++ G
Sbjct: 471 DCLGRVWQCGTIQCDFNLPERLDASYVTEDNDRDQPVMLHRAILGSFERFIGILIEHYAG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
            +P WLSP+QA V  IT S  E  +++   LK + L   +D RNE I +KIRE ++++IP
Sbjct: 531 FMPPWLSPLQACVMNITDSQAEACEKVVAKLKENGLRAISDLRNEKIGFKIRERTLERIP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +++ GD+E  E ++ +R         +S+   I ++ 
Sbjct: 591 YLLVLGDREVEEGTVNVRTRSGKNLGTMSVDAFIDLVK 628


>gi|219871154|ref|YP_002475529.1| threonyl-tRNA synthetase [Haemophilus parasuis SH0165]
 gi|254783524|sp|B8F5H9|SYT_HAEPS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|219691358|gb|ACL32581.1| threonyl-tRNA synthetase [Haemophilus parasuis SH0165]
          Length = 643

 Score =  683 bits (1761), Expect = 0.0,   Method: Composition-based stats.
 Identities = 290/648 (44%), Positives = 427/648 (65%), Gaps = 16/648 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS + F    +  +VA+SI   LAK  +A  +NG+  D SD +  + ++EIIT +
Sbjct: 4   ITLPDGSQRQFDNPVSVMEVAQSIGAGLAKATIAGRVNGERRDASDIISEDATLEIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHS AH++  A++ ++P V++AIGP I++GFYYD D ++  + ++L  +E +
Sbjct: 64  DEDGLEIIRHSTAHLLGHAIKQLFPNVKMAIGPTIDNGFYYDIDLDRSLTQEDLDALEAR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K+ +S ++AR+ FES+ E+YK+ IL E+I   +   LY   E+ D+CR
Sbjct: 124 MLELAKTNYDVVKKRVSWQEARDTFESRGESYKMAILDENISKDDRPALYHHEEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +      F KL KVAGAYWRGDS   ML RIYGTAW  +++L  YL+ LEE+ KR
Sbjct: 184 GPHVPNMRFCHHF-KLQKVAGAYWRGDSKNKMLQRIYGTAWADKKQLADYLHRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQH 303
           DHRK+ + +DL+H+ E+  G++FWH  GW IF+ L +++R K+ + DY+E+  P ++D+ 
Sbjct: 243 DHRKIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW +Y   MF       T  + R +A+KPMNCPGH+ +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWQNYGDLMFT------TQSENREYAIKPMNCPGHIQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FC  EQ+ +E      ++  IY  FGFE I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCMPEQVESEVTSCIKMVYDIYSTFGFENI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRP   +G+D +W+ AE  +   L        + +   +  GEGAFYGPK E+ L
Sbjct: 417 QVKLSTRPANSIGTDEMWNKAEADLAAALTA------NGLAFEIQEGEGAFYGPKIEFAL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D + R+WQCGTIQ+DF LP R +A YV   +++  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 RDCLDREWQCGTIQLDFFLPERLSASYVAEDNDRKTPVMIHRAILGSIERFIGIITEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+QA+V  IT S  EY Q++   L    L ++ D RNE + +K+REH+++++
Sbjct: 531 GFFPAWLAPVQAVVMNITDSQAEYVQQVVKQLSDAGLRVKADLRNEKVGFKVREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           P +++CGDKE +E  + +R           + + + +L K+    + +
Sbjct: 591 PYMLVCGDKEIAEGKVSVRTRKGADLGTYKVEEFVEMLKKQVRGRELK 638


>gi|56413681|ref|YP_150756.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197362604|ref|YP_002142241.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|73919824|sp|Q5PH96|SYT_SALPA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|238689908|sp|B5BA42|SYT_SALPK RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|56127938|gb|AAV77444.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197094081|emb|CAR59581.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
          Length = 642

 Score =  683 bits (1761), Expect = 0.0,   Method: Composition-based stats.
 Identities = 300/655 (45%), Positives = 435/655 (66%), Gaps = 19/655 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D SD +  + ++
Sbjct: 1   MPV---ITLPDGSQRHYDHPVSPMDVALDIGPGLAKATIAGRVNGELVDASDLIENDATL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L +IRHSCAH++  A++ +WP  ++AIGP++++GFYYD D ++  + +++
Sbjct: 58  SIITAKDEEGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVVDNGFYYDVDLDRTLTQEDV 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M E+  ++   +K+ +S  +ARE F  + E+YKV IL E+I   +   LY   E
Sbjct: 118 EALEKRMHELAEKNYDVIKKKVSWHEARETFVKRGESYKVSILDENIAHDDKPGLYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KLMK AGAYWRGDSN  ML RIYGTAW  ++ L  YL  L
Sbjct: 178 YVDMCRGPHVPNMRFCHHF-KLMKTAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF+ L  ++R K+K+  Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW+++GHWD+Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 297 FMMDRVLWEKTGHWDNYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  
Sbjct: 351 LPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQIRDEVNACIRMVYDMYST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI+VKLSTRP+KR+GSD +WD AE  +   L+      ++ I     LGEGAFYGP
Sbjct: 411 FGFEKIVVKLSTRPDKRIGSDEMWDRAEADLAVALE------ENNIPFEYQLGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF+LPSR +A YV   +E+  PV+IHRA+ GS+ERFIGI
Sbjct: 465 KIEFTLYDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPVIIHRAILGSMERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E F G  P WL+P+Q +V  IT S  EY  E+   L++  + ++ D RNE I +KIRE
Sbjct: 525 LTEEFAGFFPTWLAPVQVVVMNITDSQSEYVNELTQKLQNAGIRVKADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           H+++++P +++CGDKE     + +R         + + D I  L +E      Q+
Sbjct: 585 HTLRRVPYMLVCGDKEVEAGKVAVRTRRGKDLGSLDVNDVIEKLQQEIRSRSLQQ 639


>gi|262281009|ref|ZP_06058792.1| threonyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
 gi|262257909|gb|EEY76644.1| threonyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
          Length = 640

 Score =  683 bits (1761), Expect = 0.0,   Method: Composition-based stats.
 Identities = 300/638 (47%), Positives = 428/638 (67%), Gaps = 15/638 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T P+G  KNF    +  +VA+SI   LAK  VA  +N ++ D  D +  + +++IITP+
Sbjct: 4   ITLPNGDQKNFDHAVSVMEVAQSIGPGLAKNTVAGRVNDRLVDACDLITEDSTLQIITPK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  AV+ ++PE ++ IGP+IE+GFYYD    +PF+ D++A +E++
Sbjct: 64  DEEGLEIIRHSCAHLVGHAVKQLFPEAKMVIGPVIEEGFYYDIWMPRPFTLDDMAAVEER 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+++I +D   +K+    ++    F ++ E YK+ ++  +P +  + LY   ++ D+CRG
Sbjct: 124 MKKLIDQDYDVVKKMTPRDEVIAEFTARGEEYKLRLIADMPEETQMGLYYHQDYLDMCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +T  +K F KL K++GAYWRGD+    L RIYGTAW  +++L  Y+  +EE+EKRD
Sbjct: 184 PHVPNTKFLKSF-KLTKISGAYWRGDAKNEQLQRIYGTAWADKKQLAAYIKRIEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHL 304
           HRK+ + +DLFH+ E+  G++FWH  GW I+Q L  YMR+ +  + Y EI TPQ++D  L
Sbjct: 243 HRKIGKALDLFHMQEEAPGMVFWHPNGWTIYQVLEQYMRKVQQDNGYLEIKTPQIVDFTL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGH  +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYR+LP+RLAE
Sbjct: 303 WEKSGHAANYADNMFT------THSESRNYAVKPMNCPCHVQVFNQGLKSYRDLPIRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNEPSGSLHG+MRVRGFTQDDAH+FCTKEQ+  E      L + +YKDFGFE++ 
Sbjct: 357 FGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTKEQIGQEVADFIKLTLDVYKDFGFEEVQ 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +KLSTRPEKRVG DALWD AE  +   LD         +   +  GEGAFYGPK E+ LK
Sbjct: 417 MKLSTRPEKRVGDDALWDMAEKSLADALDAAG------LEWELQPGEGAFYGPKIEFSLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D +GR WQCGTIQ DFNLP R +A YV   +++  PVM+HRA+ GS ERFIGI+IE++ G
Sbjct: 471 DCLGRVWQCGTIQCDFNLPERLDASYVTEDNDRDQPVMLHRAILGSFERFIGILIEHYAG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
            +P WLSP+QA V  IT S  E  +++   LK + L   +D RNE I +KIRE ++++IP
Sbjct: 531 FMPPWLSPLQACVMNITDSQAEACEKVVAKLKENGLRAISDLRNEKIGFKIRERTLERIP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +++ GD+E  E ++ +R         +S+   I ++ 
Sbjct: 591 YLLVLGDREVEEGTVNVRTRSGKNLGTMSVDAFIDLVK 628


>gi|114769524|ref|ZP_01447150.1| threonyl-tRNA synthetase [alpha proteobacterium HTCC2255]
 gi|114550441|gb|EAU53322.1| threonyl-tRNA synthetase [alpha proteobacterium HTCC2255]
          Length = 649

 Score =  683 bits (1761), Expect = 0.0,   Method: Composition-based stats.
 Identities = 334/654 (51%), Positives = 440/654 (67%), Gaps = 10/654 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           S I +T PDG+++ +    TG D+A+ IS SLAKKA++ +ING  CDLS  +  +    I
Sbjct: 2   SQISITLPDGNVRKYAAGITGMDIAKDISTSLAKKAISCSINGNHCDLSQVIENDVEFAI 61

Query: 62  ITPED-PRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            T  D  ++L +IRH CAHIMA AVQ IWP+VQV IGP+I++G+YYDFD+++PF+ ++L+
Sbjct: 62  FTMRDNDQALELIRHDCAHIMARAVQEIWPDVQVTIGPVIDNGWYYDFDRKEPFTPEDLS 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEKKM+EII    P  ++    E+A + +    E YKVE++ SIP  E++++Y  G W 
Sbjct: 122 IIEKKMREIINLKDPVRREVWDRERAIKHYTDTNEPYKVELINSIPGDEDLSMYWHGYWQ 181

Query: 181 DLCRGPHVRSTGQ-VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           DLCRGPH+  T Q     FKLM VAGAYWRGDSN  ML RIYG A+  + +L  +L  LE
Sbjct: 182 DLCRGPHLVHTAQVPGDSFKLMSVAGAYWRGDSNNAMLQRIYGVAFQNKNDLKAHLTMLE 241

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+  RDHRKL REMDLFH+ E+  G IFWH  GWKI+  L  YMRR + K+ Y E+NTPQ
Sbjct: 242 EAALRDHRKLGREMDLFHMQEEAPGQIFWHPNGWKIYTALQDYMRRMQDKNGYVEVNTPQ 301

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW+ SGHW+ Y+ NMF V+  +D  ++    ALKPMNCP HV +FN GLKSYR+L
Sbjct: 302 VVDRKLWEASGHWEKYQENMFIVEVDEDHAREKAVNALKPMNCPCHVQIFNQGLKSYRDL 361

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFGS  R EPSG+LHG+MRVRGFTQDD H+FC++EQ+ +E     + + ++YKD 
Sbjct: 362 PLRMAEFGSCNRYEPSGALHGIMRVRGFTQDDGHIFCSEEQIESETKIYIDFLSNVYKDL 421

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF +  VK S RPEKR GSD +WD AE  +              I   + +GEGAFYGPK
Sbjct: 422 GFNEFKVKFSDRPEKRSGSDEVWDKAEKALLSATRAAG------IEPELNIGEGAFYGPK 475

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E++L DAIGRDWQCGT QVDF LP R +A Y+    +K  PVM+HRA  GS ERFIGI+
Sbjct: 476 LEFVLTDAIGRDWQCGTHQVDFVLPERLDASYIGKDGDKHRPVMLHRATLGSFERFIGIL 535

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+  G LP WL+P Q +V +I S A +Y  E    L +  +  E D RNE INYK+REH
Sbjct: 536 IESHAGKLPFWLAPRQVVVASIVSDANDYVLEKVAALNTAGIRAEADIRNEKINYKVREH 595

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           S+ K+P+I+  G +E  E ++ +RR G   T+     D I IL+ ES PPD +K
Sbjct: 596 SLGKVPVILAVGAREVEEDTVTVRRLGQKQTEVNQFNDIIAILSSESTPPDLRK 649


>gi|209695239|ref|YP_002263168.1| threonyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
 gi|208009191|emb|CAQ79445.1| threonyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
          Length = 642

 Score =  683 bits (1761), Expect = 0.0,   Method: Composition-based stats.
 Identities = 297/647 (45%), Positives = 426/647 (65%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS + F    +  DVA  I   LAK  +A  ++G   D  D +  +  +
Sbjct: 1   MPV---ITLPDGSQRQFDNAVSTMDVATDIGPGLAKACIAGRVDGVRVDACDLIENDAQL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT +D   L +IRHSCAH++  AV+ ++PE ++AIGP I++GFYYD D E   + D+L
Sbjct: 58  EIITAKDEDGLEIIRHSCAHLLGHAVKQLFPEAKMAIGPTIDNGFYYDIDMEHSLTQDDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
            +IEK+M+E+       +K+ +S ++AR+ F+++ E YK+ IL E++   +   LY   E
Sbjct: 118 DKIEKRMKELAKTKYQVIKKNVSWQEARDAFDARGETYKIAILDENVSKDDRPGLYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +    + F K++ VAGAYWRG+S+  ML RIYGTA+  ++ L  +L  L
Sbjct: 178 YIDMCRGPHVPNMSFCQNF-KILSVAGAYWRGNSDNKMLQRIYGTAFQDKKLLKAHLIRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRK+ + +DLFH+ ++  G++FWH  GW IF+ L  ++R K+ + DY+E+  P
Sbjct: 237 EEAAKRDHRKIGKHLDLFHMQQEAPGMVFWHHNGWTIFRELEVFVREKLTEYDYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++++ LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+
Sbjct: 297 LMMERVLWERSGHWDKYAEAMFT------TSSENREYAIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFG+ +RNEPSG+LHG+MRVRGFTQDDAH+FCT+ Q+ +E      ++   Y  
Sbjct: 351 LPLRMAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEAQVQDEVKSCIEMVYDTYTT 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFE I+VKLSTRPE+RVGSD +WD AE  ++  L+++       I   +  GEGAFYGP
Sbjct: 411 FGFENIVVKLSTRPEQRVGSDEMWDKAEADLQLALESMN------IAYEIQEGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF LP R  A YV   +E+  PVMIHRA+ GS+ERFIGI
Sbjct: 465 KIEFTLHDCLDRAWQCGTVQLDFALPERLGATYVGEDNERHTPVMIHRAILGSLERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE++ G  P WL+P QAIV  IT    +Y QEIA  L+ +   ++ D RNE I +KIRE
Sbjct: 525 LIEDYAGFFPTWLAPEQAIVMGITDKQADYVQEIAKKLQKNGFRVKADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H++K++P +++CGD+E     I +R        K  + D +  L +E
Sbjct: 585 HTLKRVPYMLVCGDQEMEAGEIAVRTRKGKDLGKFKIDDFVAFLQQE 631


>gi|293610405|ref|ZP_06692706.1| threonyl-tRNA synthetase [Acinetobacter sp. SH024]
 gi|292827637|gb|EFF86001.1| threonyl-tRNA synthetase [Acinetobacter sp. SH024]
 gi|325124561|gb|ADY84084.1| threonyl-tRNA synthetase [Acinetobacter calcoaceticus PHEA-2]
          Length = 640

 Score =  683 bits (1761), Expect = 0.0,   Method: Composition-based stats.
 Identities = 300/638 (47%), Positives = 428/638 (67%), Gaps = 15/638 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T P+G  K+F    +  +VA+SI   LAK  VA  +N ++ D  D +  + +++IITP+
Sbjct: 4   ITLPNGDQKSFDHAVSVMEVAQSIGPGLAKNTVAGRVNDRLVDACDLITEDSTLQIITPK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  AV+ ++PE ++ IGP+IE+GFYYD    +PF+ D++A IE++
Sbjct: 64  DEEGLEIIRHSCAHLVGHAVKQLFPEAKMVIGPVIEEGFYYDIWMPRPFTLDDMAAIEER 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+++I +D   +K+    ++    F ++ E YK+ ++  +P +  + LY   ++ D+CRG
Sbjct: 124 MKKLIDQDYDVVKKMTPRDEVIAEFTARGEEYKLRLIADMPEETQMGLYYHQDYLDMCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +T  +K F KL K++GAYWRGD+    L RIYGTAW  +++L  Y+  +EE+EKRD
Sbjct: 184 PHVPNTKFLKSF-KLTKISGAYWRGDAKNEQLQRIYGTAWADKKQLAAYIKRIEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHL 304
           HRK+ + +DLFH+ E+  G++FWH  GW I+Q L  YMR+ +  + Y EI TPQ++D  L
Sbjct: 243 HRKIGKALDLFHMQEEAPGMVFWHPNGWTIYQVLEQYMRKVQQDNGYLEIKTPQIVDFTL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGH  +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYR+LP+RLAE
Sbjct: 303 WEKSGHAANYADNMFT------THSENRNYAVKPMNCPCHVQVFNQGLKSYRDLPIRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNEPSGSLHG+MRVRGFTQDDAH+FCTKEQ+  E      L + +YKDFGFE++ 
Sbjct: 357 FGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTKEQIGQEVADFIKLTLEVYKDFGFEEVQ 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +KLSTRPEKRVG DALWD AE  +   LD         +   +  GEGAFYGPK E+ LK
Sbjct: 417 MKLSTRPEKRVGDDALWDMAEKSLADALDAAG------LEWELQPGEGAFYGPKIEFSLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D +GR WQCGTIQ DFNLP R +A YV   +++  PVM+HRA+ GS ERFIGI+IE++ G
Sbjct: 471 DCLGRVWQCGTIQCDFNLPERLDASYVTEDNDRDQPVMLHRAILGSFERFIGILIEHYAG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
            +P WLSP+QA V  IT S  E  +++   LK + L   +D RNE I +KIRE ++++IP
Sbjct: 531 FMPPWLSPLQACVMNITDSQAEACEKVVAKLKENGLRAISDLRNEKIGFKIRERTLERIP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +++ GD+E  E ++ +R         +S+   I ++ 
Sbjct: 591 YLLVLGDREVEEGTVNVRTRSGKNLGTMSVDAFIDLVK 628


>gi|292493207|ref|YP_003528646.1| threonyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
 gi|291581802|gb|ADE16259.1| threonyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
          Length = 644

 Score =  683 bits (1761), Expect = 0.0,   Method: Composition-based stats.
 Identities = 307/650 (47%), Positives = 423/650 (65%), Gaps = 18/650 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
           MP    +T PDGS + F    T  DVA  I   LAK A+A  I+G + D S P++E + +
Sbjct: 1   MPV---ITLPDGSQRYFEHSVTVYDVAADIGSGLAKAALAGKIDGHLVDTSYPLKEDTEL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            +IT  DP  L +IRHSCAH++A+AV++++PE QV IGP+IEDGFYYDF   + FS ++L
Sbjct: 58  TVITGRDPEGLEIIRHSCAHLLAQAVKALYPEAQVTIGPVIEDGFYYDFAYPKGFSPEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IE KMQE++ +D    ++  S E+A  LF    E YK EI+ SIP  E ++LYRQG++
Sbjct: 118 EAIEAKMQELVEQDISVHREVKSREEAISLFRQMGEEYKAEIIASIPQGEEISLYRQGDF 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV ST ++K F KL KV+GAYWRGD+N  ML R+YGTAW  ++ L  YL+ LE
Sbjct: 178 VDLCRGPHVPSTSRLKAF-KLTKVSGAYWRGDANNEMLQRVYGTAWPDKKALKAYLHRLE 236

Query: 240 ESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           E+EKRDHR++  E+DLF I ++ G G++FWH  G +I Q +  + R + +   YE + TP
Sbjct: 237 EAEKRDHRRIGTELDLFSIQDEAGGGLVFWHPMGARIRQVIEDFWRERHRAAGYETLYTP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +  Q LWQ SGH D YR +M+     D      + + LKPMNCP HV V+   L+SYRE
Sbjct: 297 HIAHQQLWQTSGHTDFYRESMYQPMEEDH-----QLYQLKPMNCPFHVLVYKGRLRSYRE 351

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R AE G+VYR+E SG+LHGLMRVRGFTQDDAH+FC +EQ+ +E L I +L + +   
Sbjct: 352 LPLRWAELGTVYRHEMSGALHGLMRVRGFTQDDAHIFCREEQIEDEILGILDLTLEMLSA 411

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFE+  V LSTRPEK VGSDA+W+ A   ++  L+      +  ++  V  G GAFYGP
Sbjct: 412 FGFERYEVDLSTRPEKSVGSDAIWERATQALRSALE------KKGLDYAVDEGGGAFYGP 465

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  ++DAIGR WQC T+Q+DFNLP RF   YV     +  P+MIHRAV GS+ERF G+
Sbjct: 466 KIDIKIEDAIGRKWQCSTVQLDFNLPERFEMEYVAEDGARHQPIMIHRAVLGSLERFFGV 525

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE+++G  P WL+P+Q  V  IT    EYA ++   LK+       D RNE I +KIRE
Sbjct: 526 LIEHYEGKFPPWLAPVQVAVMNITDRQAEYACQVEETLKNKGFRSLLDLRNEKIGFKIRE 585

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLP 647
           H+++++P +++ GD+E   +++ +R   S     +SL   I  L  +  P
Sbjct: 586 HTLRRVPYLLVIGDREVENQTVAVRTRYSKDLGAMSLDAFIERLDADIAP 635


>gi|254511025|ref|ZP_05123092.1| threonyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11]
 gi|221534736|gb|EEE37724.1| threonyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11]
          Length = 652

 Score =  683 bits (1761), Expect = 0.0,   Method: Composition-based stats.
 Identities = 330/653 (50%), Positives = 440/653 (67%), Gaps = 10/653 (1%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIE 60
              + LTFPDG+ +++    T + VA  IS SLAKKA++  +NG+  DL  P+  +  I 
Sbjct: 5   SQSVSLTFPDGNARSYDAGVTPAQVAADISTSLAKKAISATVNGQHWDLQWPIEADAQIA 64

Query: 61  IITPEDP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           I T +D  ++  +IRH  AHIMA AVQ IWP+ +V IGP+IE+G+YYDFD+ +PF+ ++L
Sbjct: 65  IHTMKDEAQANELIRHDLAHIMARAVQEIWPDTKVTIGPVIENGWYYDFDRAEPFTPEDL 124

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            QIEKKM+EII +  P   +    ++A + + +  E YKVE++++IP  E + +Y  G+W
Sbjct: 125 GQIEKKMKEIINKRDPVTTEVWDRQRAIDFYTANNEPYKVELIDAIPGDEPLRMYWHGDW 184

Query: 180 FDLCRGPHVRSTGQ-VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
            DLCRGPH++ TGQ     FKLM +AGAYWRGDS+R ML RIYG A+  +++L  +L+ L
Sbjct: 185 QDLCRGPHLQHTGQVPGDAFKLMSIAGAYWRGDSDRAMLQRIYGVAFTGKEKLKAHLHML 244

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTP 297
           EE+ KRDHRKL REMDLFH+ E+  G IFWH  GWKI+ TL  YMRR + +D Y E+NTP
Sbjct: 245 EEAAKRDHRKLGREMDLFHMQEEAPGQIFWHPNGWKIYTTLQDYMRRMQDRDGYVEVNTP 304

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           QV+D+ LW+ SGHWD Y+ NMF V+  ++  ++    ALKPMNCP HV VFN GLKSYR+
Sbjct: 305 QVVDRKLWEASGHWDKYQENMFIVEVDEEHAREKAINALKPMNCPCHVQVFNQGLKSYRD 364

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS  R EPSG+LHG+MRVRGFTQDD H+FC+++Q+ +E  K    +  +Y D
Sbjct: 365 LPLRMAEFGSCNRYEPSGALHGIMRVRGFTQDDGHIFCSEDQIESETAKFIAFLSKVYAD 424

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
            GF    +KLSTRPEKR+GSD  WD  E  +               +  VL GEGAFYGP
Sbjct: 425 LGFHDWTIKLSTRPEKRIGSDESWDIVEKALGDACKAAGY------DYEVLEGEGAFYGP 478

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L DAIGRDWQCGT+QVD NLP R +A ++ +   K  P M+HRA  GS ERFIGI
Sbjct: 479 KLEFTLTDAIGRDWQCGTLQVDPNLPERLDANFIGADGAKHRPFMLHRATLGSFERFIGI 538

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE   G LP WL+P Q +V +ITS A +Y  E+ + LK+  +  E D RNE INYK+RE
Sbjct: 539 LIEEHAGKLPFWLAPRQVVVASITSEADDYVMEVVDTLKAAGIRAEADIRNEKINYKVRE 598

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDC 650
           HS+ K+P+I+  G +E  ER++ IRR G   TQ  SL      L+  + PPD 
Sbjct: 599 HSVSKVPVILAVGHREVEERTVTIRRLGEKQTQVQSLETVTNELSLAATPPDL 651


>gi|242239483|ref|YP_002987664.1| threonyl-tRNA synthetase [Dickeya dadantii Ech703]
 gi|242131540|gb|ACS85842.1| threonyl-tRNA synthetase [Dickeya dadantii Ech703]
          Length = 642

 Score =  682 bits (1760), Expect = 0.0,   Method: Composition-based stats.
 Identities = 299/647 (46%), Positives = 433/647 (66%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D  D +  +  +
Sbjct: 1   MPV---ITLPDGSQRHYERAVSPFDVASDIGPGLAKACIAGKVNGELVDARDLIETDAQL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L ++RHSCAH++  A++ +WPE Q+AIGP+I++GFYYD D ++P + ++L
Sbjct: 58  SIITTKDDDGLDILRHSCAHLLGHAIKQLWPETQMAIGPVIDNGFYYDVDLDRPLTQEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M E+  +D   +K+ +S ++AR+ F ++ E+YKV IL E+I   +   LY   E
Sbjct: 118 DLLEKRMHELAEKDYDVIKKKVSWQEARDTFAARGESYKVAILDENISRDDRPGLYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KL K +GAYWRGDSN  ML RIYGTAW  +++L+ YL  L
Sbjct: 178 YIDMCRGPHVPNMRFCHHF-KLQKTSGAYWRGDSNNKMLQRIYGTAWADKKQLSAYLQRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF+ L +++R K+K+  Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEAFVRMKLKEYQYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW+++GHW++Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 297 FMMDRVLWEKTGHWENYKEAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+  E      ++  +Y  
Sbjct: 351 LPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQVRTEVNSCIKMVYDMYGT 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI VKLSTRPEKR+GSD +WD AE  +   L      +++ I      GEGAFYGP
Sbjct: 411 FGFEKIAVKLSTRPEKRIGSDEMWDRAEEDLAAAL------TENGIPFEYQPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF+LP R NA YV  ++E+  PVMIHRA+ GS+ERFIGI
Sbjct: 465 KIEFTLHDCLDRAWQCGTVQLDFSLPGRLNASYVGENNERQVPVMIHRAILGSMERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E F G  P WL+P+Q +V  IT S  +Y  E+   L+   + ++ D RNE I +KIRE
Sbjct: 525 LTEEFAGFFPTWLAPVQVVVMNITDSQSDYVSELTRKLQDAGIRVKADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H+++++P +++CGDKE     + +R         + + + I  L +E
Sbjct: 585 HTLRRVPYMLVCGDKEVEAGKVAVRTRRGKDLGSIDVSEVINKLQEE 631


>gi|62179922|ref|YP_216339.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|168263848|ref|ZP_02685821.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|168463268|ref|ZP_02697199.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|73919823|sp|Q57PV3|SYT_SALCH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|62127555|gb|AAX65258.1| threonine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|195634423|gb|EDX52775.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|205347615|gb|EDZ34246.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|322714388|gb|EFZ05959.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. A50]
          Length = 642

 Score =  682 bits (1760), Expect = 0.0,   Method: Composition-based stats.
 Identities = 300/655 (45%), Positives = 432/655 (65%), Gaps = 19/655 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D  D +  + ++
Sbjct: 1   MPV---ITLPDGSQRHYDHPVSPMDVALDIGPGLAKATIAGRVNGELVDACDLIENDATL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L +IRHSCAH++  A++ +WP  ++AIGP++++GFYYD D ++  + +++
Sbjct: 58  AIITAKDEEGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVVDNGFYYDVDLDRTLTQEDV 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M E+  ++   +K+ +S   ARE F  + E YKV IL E+I   +   LY   E
Sbjct: 118 EALEKRMHELAEKNYDVIKKKVSWHDARETFVKRGETYKVAILDENIAHDDKPGLYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KLMK AGAYWRGDSN  ML RIYGTAW  ++ L  YL  L
Sbjct: 178 YVDMCRGPHVPNMRFCHHF-KLMKTAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF+ L  ++R K+K+  Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW+++GHWD+Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 297 FMMDRVLWEKTGHWDNYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  
Sbjct: 351 LPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQIRDEVNACIRMVYDMYST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI+VKLSTRP+KR+GSD +WD AE  +   L+      ++ I     LGEGAFYGP
Sbjct: 411 FGFEKIVVKLSTRPDKRIGSDEMWDRAEADLAVALE------ENNIPFEYQLGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF+LPSR +A YV   +E+  PVMIHRA+ GS+ERFIGI
Sbjct: 465 KIEFTLYDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E F G  P WL+P+Q +V  IT S  EY  E+   L++  + ++ D RNE I +KIRE
Sbjct: 525 LTEEFAGFFPTWLAPVQVVVMNITDSQSEYVNELTQKLQNAGIRVKADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           H+++++P +++CGDKE     + +R         + + D I  L +E      Q+
Sbjct: 585 HTLRRVPYMLVCGDKEVEAGKVAVRTRRGKDLGSLDVNDVIEKLQQEIRSRSLQQ 639


>gi|300703878|ref|YP_003745480.1| threonine tRNA synthetase [Ralstonia solanacearum CFBP2957]
 gi|299071541|emb|CBJ42865.1| threonine tRNA synthetase [Ralstonia solanacearum CFBP2957]
          Length = 635

 Score =  682 bits (1760), Expect = 0.0,   Method: Composition-based stats.
 Identities = 319/643 (49%), Positives = 436/643 (67%), Gaps = 15/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEII 62
            I +T PDGS + FP   T ++VA+SI   LAK A+A  I+G + D S  + +   + I+
Sbjct: 1   MIAITLPDGSRREFPGPVTVAEVAQSIGAGLAKAALAGRIDGHLVDTSFKIEQSVDLAIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   + VIRHS AH++A AV+ ++P+ QV IGP+IE+GFYYDF  ++PF+ ++LA I
Sbjct: 61  TDKDADGVDVIRHSTAHLLAYAVKELYPDAQVTIGPVIENGFYYDFAYKRPFTPEDLAAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EKKM E+  +D    ++    ++A +LFE   E YK EI+ SIP  + + LYR+G + DL
Sbjct: 121 EKKMAELAKKDEKVTREVWRRDEAVKLFEGMGEKYKAEIIGSIPEDQEIGLYREGSFVDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG++K F KLMKVAGAYWRGDSN  ML RIYGTAW  +++   YL+ LEE+E
Sbjct: 181 CRGPHVPSTGKLKVF-KLMKVAGAYWRGDSNNEMLQRIYGTAWAKKEDQEAYLHMLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLD 301
           KRDHRKL +++DLFH+ E+  G++FWH KGW+I+Q +  YMR R     Y E+ TPQV+D
Sbjct: 240 KRDHRKLGKQLDLFHLQEEAPGMVFWHPKGWQIWQAVEQYMRGRLAGAGYSEVRTPQVMD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW +Y+ NMF       T  + R +A+KPMNCPGHV +FNHGL+SYR+LP+R
Sbjct: 300 RTLWEHSGHWQNYKENMFV------TESEKREYAIKPMNCPGHVQIFNHGLRSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFG+ +RNEPSG+LHGLMRVRGF QDDAH+FCT+ Q+  E    ++L  S+Y+DFGFE
Sbjct: 354 LAEFGACHRNEPSGALHGLMRVRGFVQDDAHIFCTEGQIMAEAKDFNDLAFSVYEDFGFE 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + VKL+ RP+KR G+D +WD AE  ++  L          +    L GEGAFYGPK EY
Sbjct: 414 NVAVKLALRPDKRAGTDEIWDHAEEGLRTALRACG------VEWEELPGEGAFYGPKVEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDAIGR WQCGT+Q+D  LP R  A YV+  + +  PVM+HRA+ GS ERF+GI++EN
Sbjct: 468 HIKDAIGRSWQCGTLQLDLVLPERLGAEYVSEDNSRKRPVMLHRAILGSFERFLGILLEN 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G LPLWL+P Q +V +I  +  EY Q +A  L+        D RNE I YKIREHS++
Sbjct: 528 HAGALPLWLAPEQVVVMSIADAHAEYVQTVAQSLQKQGFRASADLRNEKITYKIREHSLQ 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K+P +++ GDKE     + +R  G+     + +   +  L  +
Sbjct: 588 KVPYLVVVGDKERDGNQVAVRARGNVDLGSMPISAFVERLQND 630


>gi|27365716|ref|NP_761244.1| threonyl-tRNA synthetase [Vibrio vulnificus CMCP6]
 gi|31340449|sp|Q8DA13|SYT_VIBVU RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|27361865|gb|AAO10771.1| threonyl-tRNA synthetase [Vibrio vulnificus CMCP6]
          Length = 642

 Score =  682 bits (1760), Expect = 0.0,   Method: Composition-based stats.
 Identities = 291/642 (45%), Positives = 426/642 (66%), Gaps = 17/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  DVA SI   LAK  +A  +NG+  D  D +  + S+EIIT +
Sbjct: 4   ITLPDGSQRQFDNPVSTMDVALSIGPGLAKATIAGRVNGQRVDACDLIEEDASLEIITTK 63

Query: 66  DP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  A++ ++P  ++AIGP I++GFYYD D E+  + ++L +IE 
Sbjct: 64  DEVDGLEIVRHSCAHLLGHALKQLYPNAKMAIGPTIDNGFYYDIDLEESLTQEDLEKIEA 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLC 183
           +M+ +       +K+ +S ++AR+ FE++ E YK+EIL E++   +   LY   E+ D+C
Sbjct: 124 RMKALAKTKYQVIKKKVSWQEARDAFEARGETYKMEILDENVSRDDRPGLYHHEEYIDMC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +    + F  L  VAGAYWRG+S+  ML RIYGTA++ ++ L  +L  LEE+ K
Sbjct: 184 RGPHVPNMSFCQHFTLL-NVAGAYWRGNSDNKMLQRIYGTAFHDKKALKDHLTRLEEAAK 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRK+ +++DLFH+ ++  G++FWH  GW +F+ L  ++R K+ +  Y+E+  P ++D+
Sbjct: 243 RDHRKIGKQLDLFHMQQEAPGMVFWHHNGWSVFRDLEVFIREKLTEYGYQEVKGPLMMDR 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+
Sbjct: 303 VLWERSGHWDKYADAMFT------TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRM 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHG+MRVRGFTQDDAH+FCT+ Q+ +E      ++   Y+ FGF+ 
Sbjct: 357 AEFGSCHRNEPSGALHGIMRVRGFTQDDAHIFCTESQIQDEVTNCIKMVYDTYQTFGFDN 416

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I VKLSTRPE+RVGSD +WD +E  +K  L+++       I   +  GEGAFYGPK E+ 
Sbjct: 417 IAVKLSTRPEQRVGSDEIWDQSEEALKQALESM------DIAYEIQEGEGAFYGPKIEFT 470

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D +GR WQCGT+Q+DFNLP+R  A YV  ++E+  PVMIHRA+ GS+ERFIGI+IE +
Sbjct: 471 LFDCLGRAWQCGTVQLDFNLPNRLGATYVGENNERLVPVMIHRAILGSLERFIGILIEEY 530

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P QA++  IT    +Y QEIA  L+   +  + D RNE I +KIREH++K+
Sbjct: 531 AGFFPTWLAPEQAVIMNITDKQADYVQEIAQKLQKCGIRAKADLRNEKIGFKIREHTLKR 590

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P +++CGD+E     I +R        K  + D +  +  +
Sbjct: 591 VPFMLVCGDQEMEAGEIAVRTRKGNDLGKFKVDDFVSYIQDQ 632


>gi|300716458|ref|YP_003741261.1| Threonyl-tRNA synthetase [Erwinia billingiae Eb661]
 gi|299062294|emb|CAX59411.1| Threonyl-tRNA synthetase [Erwinia billingiae Eb661]
          Length = 642

 Score =  682 bits (1760), Expect = 0.0,   Method: Composition-based stats.
 Identities = 289/647 (44%), Positives = 430/647 (66%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP    +T PDGS ++F    +  D+A+ I   LAK  +A  +NG++ D  DP+  + ++
Sbjct: 1   MPV---ITLPDGSQRSFDHAVSVMDIAQDIGPGLAKACIAGRVNGELVDAVDPITEDANV 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L +IRHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D ++  + +++
Sbjct: 58  AIITAKDEAGLEIIRHSCAHLLGHAIKQLWPDTKMAIGPVIDNGFYYDVDIDRTLTQEDI 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
            Q+EK+M ++   +   +K+ +S ++AR+ F ++ E YK+ IL E+I   +   LY   E
Sbjct: 118 EQLEKRMHQLAETNYDVIKKKVSWQEARDAFAARGETYKITILDENISHDDQPGLYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KL K++GAYWRGDSN  ML RIYGTAW  +++L  YL  L
Sbjct: 178 YVDMCRGPHVPNMRFCHHF-KLQKISGAYWRGDSNNKMLQRIYGTAWADKKQLAAYLLRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF+ L  ++R K+ + DY+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLTEYDYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW+++GHW++Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 297 LMMDRVLWEKTGHWENYKEAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT+EQ+  E      ++  +Y  
Sbjct: 351 LPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQVRTEVNSCIRMVYDMYST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI+VKLSTRP KR+G++  WD AE  +   L       ++ I      GEGAFYGP
Sbjct: 411 FGFEKIVVKLSTRPVKRIGTEEQWDRAEADLAAALK------ENDIPFEYQPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF+LPSR +A Y+  ++E+  PVMIHRA+ GS+ERFIGI
Sbjct: 465 KIEFTLHDCLDRAWQCGTVQLDFSLPSRLSASYIGENNERQVPVMIHRAILGSVERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E + G  P WL+P+Q +V  IT    EY  E+   L++  +  + D RNE I +KIRE
Sbjct: 525 LTEEYAGFFPTWLAPVQVVVMNITDGQSEYVAELTRKLQNAGIRAKADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H+++++P +++CGDKE     + +R         + + + I  L  E
Sbjct: 585 HTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSMDVNEVIAKLQDE 631


>gi|28211884|ref|NP_782828.1| threonyl-tRNA synthetase [Clostridium tetani E88]
 gi|73919782|sp|Q891T0|SYT_CLOTE RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|28204327|gb|AAO36765.1| threonyl-tRNA synthetase [Clostridium tetani E88]
          Length = 639

 Score =  682 bits (1760), Expect = 0.0,   Method: Composition-based stats.
 Identities = 303/643 (47%), Positives = 414/643 (64%), Gaps = 16/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEII 62
            I +T  DG +         SD+   IS +L KKAV   ING++ +L   ++E S +EI+
Sbjct: 1   MINITLKDGKVIEVEKGVKVSDIVMKISPALYKKAVGAKINGEIAELMTEIKEDSELEIL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D      +RH+ +HI+A+AV+ ++PE ++AIGP I++GFYYDFD +  F+ + L +I
Sbjct: 61  TFDDEEGRKTVRHTSSHILAQAVKRLYPEAKLAIGPAIDNGFYYDFDIDFTFTPEMLEKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M +I+  +    +  L  E+A +L +   E YKVE++E +P  E ++ Y+QG++ DL
Sbjct: 121 EKEMAKIVKENLEIERFELPREEAIKLVKDASEPYKVELIEDLPEGEVISFYKQGDFVDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPH+ STG++K   KL+ VAGAYWRGD    ML RIYGTA+  + EL  YL  LEE++
Sbjct: 181 CAGPHLPSTGKIK-AIKLLSVAGAYWRGDEKNKMLQRIYGTAFLKKSELEAYLKMLEEAK 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLD 301
           +RDHRKL +E+DLF I E+G G  F+H KG  +   L ++ R K  K  Y+EI TP +L+
Sbjct: 240 RRDHRKLGKELDLFTINEEGPGFPFFHPKGMVVRNILENFWREKHTKAGYDEIRTPVILN 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW +SGHWD Y+ NM+  K       D   FA+KPMNCPG + V+   L SY+E P+R
Sbjct: 300 EELWHRSGHWDHYKENMYFTKI------DNENFAIKPMNCPGSILVYKSHLHSYKEFPMR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           L E G V+R+E SG+LHGLMRVR FTQDDAH+F TKEQ+ +E L +  LI S YK FGFE
Sbjct: 354 LGELGLVHRHELSGALHGLMRVRCFTQDDAHIFMTKEQIKDEILNVIKLIDSFYKVFGFE 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPE  +GSD  W+ A N +K  L+         +   +  G+GAFYGPK ++
Sbjct: 414 YF-VELSTRPEDSMGSDEDWEVATNGLKNALE------GAGLEYKINEGDGAFYGPKIDF 466

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            LKD IGR WQCGTIQ+DF +P RF+  YV    EK  PVM+HR VFGSIERFIGI+IE+
Sbjct: 467 HLKDCIGRTWQCGTIQLDFQMPERFDLTYVGQDGEKHRPVMVHRVVFGSIERFIGILIEH 526

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           F G  P WL+P+Q  V TIT S  +YA ++ N LK   + +E D RNE I YKIRE  ++
Sbjct: 527 FAGAFPTWLAPVQVKVMTITDSQKDYANKVVNDLKEKGIRVEFDDRNEKIGYKIREAQLQ 586

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K+P +II GDKE SE  + +R         +SL + +  L  E
Sbjct: 587 KVPYMIILGDKEVSENKVAVRSRKEGDLGAISLKEFVAKLNYE 629


>gi|28898054|ref|NP_797659.1| threonyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|260362413|ref|ZP_05775365.1| threonine--tRNA ligase [Vibrio parahaemolyticus K5030]
 gi|260878403|ref|ZP_05890758.1| threonine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|31340445|sp|Q87Q70|SYT_VIBPA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|28806268|dbj|BAC59543.1| threonyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|308091059|gb|EFO40754.1| threonine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|308115583|gb|EFO53123.1| threonine--tRNA ligase [Vibrio parahaemolyticus K5030]
          Length = 642

 Score =  682 bits (1759), Expect = 0.0,   Method: Composition-based stats.
 Identities = 296/642 (46%), Positives = 427/642 (66%), Gaps = 17/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  +VA+SI   LAK  +A  +NG   D  D +  + S+EIIT +
Sbjct: 4   ITLPDGSQRQFDNPVSTMEVAQSIGPGLAKATIAGRVNGNRVDACDLIEEDASLEIITVK 63

Query: 66  DP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  A++ ++P+ ++AIGP I++GFYYD D ++  + ++L +IEK
Sbjct: 64  DEVDGLEIVRHSCAHLLGHALKQLYPQAKMAIGPTIDNGFYYDIDLDESLTQEDLEKIEK 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLC 183
           +M+E+       +K+ +S ++AR+ FES+ E YKVEIL E++   +   LY   E+ D+C
Sbjct: 124 RMKELAKTKYEVVKKKVSWQEARDTFESRGEPYKVEILDENVSRDDRPGLYHHEEYIDMC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV + G  + F  L  VAGAYWRG+S+  ML RIYGTA++ ++ L  +L  LEE+ K
Sbjct: 184 RGPHVPNMGFCQHFTLL-NVAGAYWRGNSDNKMLQRIYGTAFHDKKALKAHLTRLEEAAK 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRK+ +++DLFH+ ++  G++FWH  GW IF+ L  ++R K+ + DY+E+  P ++D+
Sbjct: 243 RDHRKIGKQLDLFHMQQEAPGMVFWHHNGWSIFRDLEVFVRDKLNEYDYQEVKGPLMMDR 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+
Sbjct: 303 VLWERSGHWDKYADAMFT------TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRM 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHG+MRVRGFTQDDAH+FCT+ Q+  E      ++   Y+ FGF+ 
Sbjct: 357 AEFGSCHRNEPSGALHGIMRVRGFTQDDAHIFCTESQIQEEVTSCIKMVYDTYQTFGFDN 416

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+VKLSTRPEKRVGSD +WD +E  +K  L++++      I   +  GEGAFYGPK E+ 
Sbjct: 417 IVVKLSTRPEKRVGSDEIWDQSEEALKQSLESME------IPYEIQEGEGAFYGPKIEFT 470

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D + R WQCGT+Q+DFNLP R  A YV  ++E+  PVMIHRA+ GS+ERFIGI+IE +
Sbjct: 471 LYDCLDRAWQCGTVQLDFNLPGRLGATYVGENNERLVPVMIHRAILGSLERFIGILIEEY 530

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P QA++  IT     Y QEI   L+   +  + D RNE I +KIREH++K+
Sbjct: 531 AGFFPTWLAPEQAVLMNITDKQSGYVQEIVQKLQKSGIRAKADLRNEKIGFKIREHTLKR 590

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P +++ GD+E     I +R        K  + D I  +  E
Sbjct: 591 VPYMLVVGDQEMEAGEIAVRTRKGKDLGKFKVDDFIAYIQDE 632


>gi|254462954|ref|ZP_05076370.1| threonyl-tRNA synthetase [Rhodobacterales bacterium HTCC2083]
 gi|206679543|gb|EDZ44030.1| threonyl-tRNA synthetase [Rhodobacteraceae bacterium HTCC2083]
          Length = 643

 Score =  682 bits (1759), Expect = 0.0,   Method: Composition-based stats.
 Identities = 340/651 (52%), Positives = 464/651 (71%), Gaps = 15/651 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           +++ LTFPDG+ + +    T +DVA  IS SL KKA++  +NG   DL  P+  + SI +
Sbjct: 2   ANVTLTFPDGNQREYARGITAADVAADISSSLRKKAISATVNGAHWDLQWPIESDSSIAL 61

Query: 62  ITPEDPR-SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            T +D + +L ++RH  AHIMA AVQ IWP+V+V IGP+I+DG+YYDFD+++PF+ ++L+
Sbjct: 62  NTMKDEKPALELVRHDLAHIMARAVQEIWPDVKVTIGPVIKDGWYYDFDRQEPFTPEDLS 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEKKM+EII        +     +A + +E   E YKVE++++IP  E + +Y  G+W 
Sbjct: 122 VIEKKMKEIINARDAVRTEVWDRARAIKHYEDNNEPYKVELIDAIPGDEPLRMYWHGDWQ 181

Query: 181 DLCRGPHVRSTGQ-VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           D+CRGPH++ TGQ     +KLM VAGAYWRGDS+RPML RIYG A+  +++L  +L FLE
Sbjct: 182 DMCRGPHLQHTGQVPGDSWKLMSVAGAYWRGDSDRPMLQRIYGAAFANKEQLKAHLTFLE 241

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+ KRDHRKL REM LFH  E   G + WH  GW++FQTLI+YMRR+     Y E+NTP 
Sbjct: 242 EAAKRDHRKLGREMGLFHFEEVAPGSVIWHPNGWRVFQTLIAYMRRRQDVAGYVEVNTPD 301

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D+ LW+ SGHW +Y+ NMF  +  DD     R +ALKPMNCPGH+ V+NH L+SYR+L
Sbjct: 302 IMDRALWETSGHWFNYKENMFLAQTQDD-----RDYALKPMNCPGHMMVYNHSLRSYRDL 356

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           PV++AEFG V+R EPSG+LHGL+RVR FTQDDAH++C+ EQ+ +ECLK+++LI+SIYKDF
Sbjct: 357 PVKIAEFGKVHRYEPSGALHGLLRVRSFTQDDAHIYCSPEQLTDECLKVNDLILSIYKDF 416

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE + VKLSTRPE R+GSD  WD +E  +K  L+    S        +  GEGAFYGPK
Sbjct: 417 GFEDVHVKLSTRPENRIGSDESWDLSEGALKTALERAGMS------YTIFEGEGAFYGPK 470

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            EY+L+DAIGRDWQCGT+QVD+NLP RF + YV++  EK  PVM+HRA+FGS+ERFIGI+
Sbjct: 471 LEYVLRDAIGRDWQCGTLQVDYNLPERFGSTYVSASGEKLAPVMLHRALFGSLERFIGIL 530

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IEN++G LP WL+P Q +V +I S A +Y  E  + LK+  +  E D RNE INYK+REH
Sbjct: 531 IENWEGKLPFWLAPRQVVVASIISDADDYVYEAVDALKAAGVQAEADIRNEKINYKVREH 590

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPD 649
           S+ K+P+I+  G +E  ER++ +RR G   T+  +L   I  L+ E+ PPD
Sbjct: 591 SVGKVPVILAIGAREVEERTVTVRRLGEKQTKVEALESVISALSLEATPPD 641


>gi|291614198|ref|YP_003524355.1| threonyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1]
 gi|291584310|gb|ADE11968.1| threonyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1]
          Length = 637

 Score =  682 bits (1759), Expect = 0.0,   Method: Composition-based stats.
 Identities = 318/646 (49%), Positives = 447/646 (69%), Gaps = 18/646 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS +++P   T ++VA+SI   LA+ A+A  ++G + D S  +  +  +
Sbjct: 1   MPV---ITLPDGSQRSYPNPVTVAEVAQSIGAGLARAALAGKVDGVLVDTSHLISVDAKL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            +IT +D   + +IRHS AH++A AV+ ++PE QV IGP+IE+GFYYDF   +PF+ ++L
Sbjct: 58  AVITDKDADGVDLIRHSTAHLLAYAVKDLFPEAQVTIGPVIENGFYYDFAYSRPFTPEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEK+M E+  +D P  ++ L  ++A   F+S  E YK EI+ESIPA ++V+LY +G++
Sbjct: 118 TAIEKRMAELAKKDLPVTRKVLPRDEAVAYFKSIGEKYKAEIIESIPADQDVSLYSEGDF 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV STG++K F KLMKVAGAYWRGDS   ML RIYGTAW  +++L  YL  LE
Sbjct: 178 TDLCRGPHVPSTGKLKAF-KLMKVAGAYWRGDSKNEMLQRIYGTAWAKKEDLEAYLVRLE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+EKRDHRKL +++DLFH+ ++  G++FWH KGW ++Q +  YMR   + + Y EI  PQ
Sbjct: 237 EAEKRDHRKLGKQLDLFHMQDEAPGMVFWHPKGWAMWQVIEQYMRAVYRDNGYHEIRCPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D+ LW++SGHW+ Y+ANMF       T  +   +A+KPMNCPGHV VFN  L+SYREL
Sbjct: 297 IIDRVLWEKSGHWEHYKANMFT------TESEKHDYAIKPMNCPGHVQVFNADLRSYREL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R  EFGS +RNEPSG LHGLMRVRGF QDD H+FCT+EQ+ +E    + L++ +YKDF
Sbjct: 351 PLRYGEFGSCHRNEPSGGLHGLMRVRGFVQDDGHIFCTEEQIESEVKAFNTLVLKVYKDF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF  ++VKL+ RPE RVGSD +WD +EN ++  L          ++   L GEGAFYGPK
Sbjct: 411 GFHDVVVKLALRPEGRVGSDEIWDKSENALRAALRASG------MDWEELPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ +KDAIGR WQCGTIQVDF++P R  A +V+  + +  PVM+HRA+ GS+ERFIGI+
Sbjct: 465 IEFHIKDAIGRSWQCGTIQVDFSMPGRLGAEFVDEDNTRKVPVMLHRAILGSLERFIGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           +EN  G LPLWL+P+Q +V  I+ +  EYA ++A  L++    +++D RNE I YKIREH
Sbjct: 525 VENHAGALPLWLAPVQMVVMNISQAQEEYAGKVAQTLRASGFRVQSDLRNEKITYKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           S++K+P  +I GDKE +   + +R        ++S+   I  L  E
Sbjct: 585 SLQKLPYQLIIGDKEVAAGLVAVRSRTGEDLGQMSVDALIQRLQAE 630


>gi|320156122|ref|YP_004188501.1| threonyl-tRNA synthetase [Vibrio vulnificus MO6-24/O]
 gi|319931434|gb|ADV86298.1| threonyl-tRNA synthetase [Vibrio vulnificus MO6-24/O]
          Length = 642

 Score =  682 bits (1759), Expect = 0.0,   Method: Composition-based stats.
 Identities = 291/642 (45%), Positives = 426/642 (66%), Gaps = 17/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  DVA SI   LAK  +A  +NG+  D  D +  + S+EIIT +
Sbjct: 4   ITLPDGSQRQFDNPVSTMDVALSIGPGLAKATIAGRVNGQRVDACDLIEEDASLEIITTK 63

Query: 66  DP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  A++ ++P  ++AIGP I++GFYYD D E+  + ++L +IE 
Sbjct: 64  DEVDGLEIVRHSCAHLLGHALKQLYPNAKMAIGPTIDNGFYYDIDLEESLTQEDLEKIEA 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLC 183
           +M+ +       +K+ +S ++AR+ FE++ E YK+EIL E++   +   LY   E+ D+C
Sbjct: 124 RMKALAKTKYQVIKKKVSWQEARDAFEARGETYKMEILDENVSRDDRPGLYHHEEYIDMC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +    + F  L  VAGAYWRG+S+  ML RIYGTA++ ++ L  +L  LEE+ K
Sbjct: 184 RGPHVPNMSFCQHFTLL-NVAGAYWRGNSDNKMLQRIYGTAFHDKKALKDHLTRLEEAAK 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRK+ +++DLFH+ ++  G++FWH  GW +F+ L  ++R K+ +  Y+E+  P ++D+
Sbjct: 243 RDHRKIGKQLDLFHMQQEAPGMVFWHHNGWSVFRDLEVFIREKLAEYGYQEVKGPLMMDR 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+
Sbjct: 303 VLWERSGHWDKYADAMFT------TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRM 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHG+MRVRGFTQDDAH+FCT+ Q+ +E      ++   Y+ FGF+ 
Sbjct: 357 AEFGSCHRNEPSGALHGIMRVRGFTQDDAHIFCTESQIQDEVTNCIKMVYDTYQTFGFDN 416

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I VKLSTRPE+RVGSD +WD +E  +K  L+++       I   +  GEGAFYGPK E+ 
Sbjct: 417 IAVKLSTRPEQRVGSDEIWDQSEEALKQALESM------DIAYEIQEGEGAFYGPKIEFT 470

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D +GR WQCGT+Q+DFNLP+R  A YV  ++E+  PVMIHRA+ GS+ERFIGI+IE +
Sbjct: 471 LFDCLGRAWQCGTVQLDFNLPNRLGATYVGENNERLVPVMIHRAILGSLERFIGILIEEY 530

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P QA++  IT    +Y QEIA  L+   +  + D RNE I +KIREH++K+
Sbjct: 531 AGFFPTWLAPEQAVIMNITDKQADYVQEIAQKLQKCGIRAKADLRNEKIGFKIREHTLKR 590

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P +++CGD+E     I +R        K  + D +  +  +
Sbjct: 591 VPFMLVCGDQEMEAGEIAVRTRKGNDLGKFKVDDFVSYIQDQ 632


>gi|83748297|ref|ZP_00945322.1| Threonyl-tRNA synthetase [Ralstonia solanacearum UW551]
 gi|83725029|gb|EAP72182.1| Threonyl-tRNA synthetase [Ralstonia solanacearum UW551]
          Length = 635

 Score =  682 bits (1759), Expect = 0.0,   Method: Composition-based stats.
 Identities = 320/643 (49%), Positives = 434/643 (67%), Gaps = 15/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEII 62
            I +T PDGS + FP   T ++VA+SI   LAK A+A  I+G + D S  + +   + I+
Sbjct: 1   MIAITLPDGSRREFPGPVTVAEVAQSIGAGLAKAALAGRIDGHLVDTSFKIEQSVDLAIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   L VIRHS AH++A AV+ + P+ QV IGP+IE+GFYYDF  ++PF+ ++L  I
Sbjct: 61  TDKDADGLDVIRHSTAHLLAYAVKELHPDAQVTIGPVIENGFYYDFAYKRPFTPEDLVAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EKKM E+  +D    ++  S  +A +LFE   E YK EI+ SIP  + + LYR+G + DL
Sbjct: 121 EKKMAELAKKDEKVTREVWSRNEAVKLFEGMGEKYKAEIIASIPEDQEIGLYREGSFVDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG++K F KLMKVAGAYWRGDSN  ML RIYGTAW  +++   YL+ LEE+E
Sbjct: 181 CRGPHVPSTGKLKVF-KLMKVAGAYWRGDSNNEMLQRIYGTAWAKKEDQEAYLHMLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLD 301
           KRDHRKL +++DLFH+ E+  G++FWH KGW+I+Q +  YMR R     Y E+ TPQV+D
Sbjct: 240 KRDHRKLGKQLDLFHLQEEAPGMVFWHPKGWQIWQAVEQYMRGRLAGAGYSEVRTPQVMD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW +Y+ NMF       T  + R +A+KPMNCPGHV +FNHGL+SYR+LP+R
Sbjct: 300 RTLWEHSGHWQNYKENMFV------TESEKREYAIKPMNCPGHVQIFNHGLRSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFG+ +RNEPSG+LHGLMRVRGF QDDAH+FCT+ Q+  E    ++L  S+Y+DFGFE
Sbjct: 354 LAEFGACHRNEPSGALHGLMRVRGFVQDDAHIFCTEGQIMAEAKDFNDLAFSVYEDFGFE 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + VKL+ RP+KR G+D +WD AE  ++  L          +    L GEGAFYGPK EY
Sbjct: 414 NVAVKLALRPDKRAGTDEIWDHAEEGLRTALRACG------VEWEELPGEGAFYGPKVEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDAIGR WQCGT+Q+D  LP R  A YV   + +  PVM+HRA+ GS ERF+GI++EN
Sbjct: 468 HIKDAIGRSWQCGTLQLDLVLPERLGAEYVAEDNSRKRPVMLHRAILGSFERFLGILLEN 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G LPLWL+P Q +V +I  +  EYA+ +A  L+        D RNE I YKIREHS++
Sbjct: 528 HAGALPLWLAPEQVVVMSIADAHAEYAETVAQSLQKQGFRASADLRNEKITYKIREHSLQ 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K+P +++ GDKE     + +R  G+     + +   +  L  +
Sbjct: 588 KVPYLVVVGDKERDGNQVAVRARGNVDLGSMPVSAFVERLQND 630


>gi|262394487|ref|YP_003286341.1| threonyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|262338081|gb|ACY51876.1| threonyl-tRNA synthetase [Vibrio sp. Ex25]
          Length = 642

 Score =  682 bits (1759), Expect = 0.0,   Method: Composition-based stats.
 Identities = 294/642 (45%), Positives = 424/642 (66%), Gaps = 17/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  +VA+SI   LAK  +A  +NG   D  D +  + S+EIIT +
Sbjct: 4   ITLPDGSQRQFDNPVSTMEVAQSIGPGLAKATIAGRVNGNRVDACDLIEEDASLEIITVK 63

Query: 66  DP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  A++ ++P+ ++AIGP I++GFYYD D ++  + ++L +IEK
Sbjct: 64  DEVDGLEIVRHSCAHLLGHALKQLYPQAKMAIGPTIDNGFYYDIDLDESLTQEDLEKIEK 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLC 183
           +M+E+       +K+ +S ++AR+ FES+ E YKVEIL E++   +   LY   E+ D+C
Sbjct: 124 RMKELAKTKYEVVKKKVSWQEARDTFESRGEPYKVEILDENVSRDDRPGLYHHEEYIDMC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +    + F  L  VAGAYWRG+S+  ML RIYGTA++ ++ L  +L  LEE+ K
Sbjct: 184 RGPHVPNMSFCQHFTLL-NVAGAYWRGNSDNKMLQRIYGTAFHDKKALKAHLTRLEEAAK 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRK+ +++DLFH+ ++  G++FWH  GW IF+ L  ++R K+ +  Y+E+  P ++D+
Sbjct: 243 RDHRKIGKQLDLFHMQQEAPGMVFWHHNGWSIFRDLEVFIRAKLDEYGYQEVKGPLMMDR 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+
Sbjct: 303 VLWERSGHWDKYADAMFT------TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRM 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHG+MRVRGFTQDDAH+FCT+ Q+  E      ++   Y+ FGF+ 
Sbjct: 357 AEFGSCHRNEPSGALHGIMRVRGFTQDDAHIFCTESQIQEEVTNCIKMVYDTYQTFGFDN 416

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+VKLSTRPEKRVGSD +WD +E  +K  L+++       I   +  GEGAFYGPK E+ 
Sbjct: 417 IVVKLSTRPEKRVGSDEIWDQSEEALKQSLESM------DIPYEIQEGEGAFYGPKIEFT 470

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D + R WQCGT+Q+DFNLP R  A YV  ++E+  PVMIHRA+ GS+ERFIGI+IE +
Sbjct: 471 LYDCLDRAWQCGTVQLDFNLPGRLGATYVGENNERLVPVMIHRAILGSLERFIGILIEEY 530

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P QA++  IT     Y QEI   L+   +  + D RNE I +KIREH++K+
Sbjct: 531 AGFFPTWLAPEQAVLMNITDKQSGYVQEIVQKLQKSGIRAKADLRNEKIGFKIREHTLKR 590

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P +++ GD+E     I +R        K  + D I  +  E
Sbjct: 591 VPYMLVVGDQEMEAGEIAVRTRKGKDLGKFKVDDFIAYIQDE 632


>gi|269139162|ref|YP_003295863.1| threonyl-tRNA synthetase [Edwardsiella tarda EIB202]
 gi|267984823|gb|ACY84652.1| threonyl-tRNA synthetase [Edwardsiella tarda EIB202]
 gi|304559086|gb|ADM41750.1| Threonyl-tRNA synthetase [Edwardsiella tarda FL6-60]
          Length = 642

 Score =  682 bits (1759), Expect = 0.0,   Method: Composition-based stats.
 Identities = 296/647 (45%), Positives = 437/647 (67%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS ++F    +  D+A  I   LAK  +A  +NG++ D  D +  + ++
Sbjct: 1   MPV---ITLPDGSQRHFDHPVSVMDIARDIGPGLAKACIAGRVNGELVDACDLIDADATV 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   + ++RHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D +   + ++L
Sbjct: 58  AIITAKDQEGVDILRHSCAHLLGHAIKQLWPQTKMAIGPVIDNGFYYDVDLDHTLTQEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
            +++K+M E+  +D   +K+ +S ++AR+ F ++ E YKV IL E+I   +   LY   E
Sbjct: 118 DRLDKRMHELAEKDYDVIKRKVSWQEARDAFVARDEPYKVAILDENISHDDRPGLYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KL K +GAYWRGDS+  ML RIYGTAW  +++L  YL  L
Sbjct: 178 YVDMCRGPHVPNMRFCHHF-KLQKSSGAYWRGDSDNKMLQRIYGTAWADKKQLNAYLQRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF+ L +++R K+K+  Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEAFVRMKLKEYQYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW+++GHW++Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 297 FMMDRVLWEKTGHWENYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  
Sbjct: 351 LPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDEVNSCIKMVYDMYST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI+VKLSTRPEKR+GSD +WD AE  +   L       ++ I      GEGAFYGP
Sbjct: 411 FGFEKIVVKLSTRPEKRIGSDEIWDRAEEDLAAALQ------ENGIPFEYQPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF+LP R +A YV  ++E+  PVMIHRA+ GS+ERFIGI
Sbjct: 465 KIEFTLHDCLDRAWQCGTVQLDFSLPGRLSASYVGENNERVVPVMIHRAILGSMERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E F G  P WL+P+QA+V  IT S  EY +E++  L++  +  ++D RNE I +KIRE
Sbjct: 525 LTEEFAGFFPTWLAPVQAVVMNITDSQAEYVEELSKKLQAAGIRAKSDLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H+++++P +++CGDKE     + +R         +S+ D I  L +E
Sbjct: 585 HTLRRVPYMLVCGDKEVEAGKVAVRTRRGKDLGVISIDDVIEKLQQE 631


>gi|50086067|ref|YP_047577.1| threonyl-tRNA synthetase [Acinetobacter sp. ADP1]
 gi|73919764|sp|Q6F860|SYT_ACIAD RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|49532043|emb|CAG69755.1| threonyl-tRNA synthetase [Acinetobacter sp. ADP1]
          Length = 640

 Score =  682 bits (1759), Expect = 0.0,   Method: Composition-based stats.
 Identities = 301/638 (47%), Positives = 429/638 (67%), Gaps = 15/638 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T P+G  K+F    +   VA+SI   LAK  VA  +N ++ D  D +  + +++IITP+
Sbjct: 4   ITLPNGDQKSFDQPVSVMQVAQSIGPGLAKNTVAGRVNDRLVDACDLITEDATLQIITPK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           DP  + +IRHSCAH++  AV+ ++P+VQ+ IGP+IE+GFYYD    +PF+ D++A IE +
Sbjct: 64  DPEGVEIIRHSCAHLVGHAVKQLFPDVQMVIGPVIEEGFYYDIFSPKPFTLDDMAAIEAR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+++I +D   +K+    E+  + F ++ E YK+ +++ +P +  + LY   E+ D+CRG
Sbjct: 124 MKQLIDQDYDVVKKMTPREQVIQEFTTRGETYKLRLIDDMPEETQMGLYYHQEYVDMCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +T  +K F KL K++GAYWRGD+    L RIYGTAW+ ++EL  Y+  +EE+EKRD
Sbjct: 184 PHVPNTKFLKNF-KLTKISGAYWRGDAKNEQLQRIYGTAWSDKKELAAYIKRIEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHL 304
           HRK+ + +DLFH+ E+  G++FWH  GW I+Q L  YMR+ +  + Y+E+ TPQ++D  L
Sbjct: 243 HRKIGKALDLFHMQEEAPGMVFWHANGWTIYQALEQYMRKVQQDNGYQEVRTPQIVDFTL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGH  +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYR+LPVRLAE
Sbjct: 303 WEKSGHAANYAENMFT------THSESRNYAVKPMNCPCHVQVFNQGLKSYRDLPVRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNEPSGSLHG+MRVRGFTQDD H+FCTKEQ+  E      L + +YKDFGFE + 
Sbjct: 357 FGSCHRNEPSGSLHGIMRVRGFTQDDGHIFCTKEQIGKEVADFIQLTLDVYKDFGFEDVQ 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +KLSTRPEKRVG D LWD AE  +   LD         +   +  GEGAFYGPK E+ LK
Sbjct: 417 MKLSTRPEKRVGDDRLWDLAEKSLADALDAAG------LEWELQPGEGAFYGPKIEFSLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D +GR WQCGTIQ DFNLP R +A +V   +E+  PVM+HRA+ GS ERFIGI+IE++ G
Sbjct: 471 DCLGRVWQCGTIQCDFNLPIRLDASFVTEDNERDQPVMLHRAILGSFERFIGILIEHYAG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
            +P WL+P+QA V  IT S  E  Q++   LK + L   +D RNE I +KIRE ++++IP
Sbjct: 531 FMPPWLAPVQACVMNITDSQAEACQQVVAKLKENGLRAISDLRNEKIGFKIRERTLERIP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +++ GD+E  E ++ +R         +S+   + ++ 
Sbjct: 591 YLLVLGDREVEEGTVNVRTRSGKNLGTMSIDAFVDLVK 628


>gi|251792477|ref|YP_003007203.1| threonyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
 gi|247533870|gb|ACS97116.1| threonyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
          Length = 643

 Score =  682 bits (1759), Expect = 0.0,   Method: Composition-based stats.
 Identities = 296/647 (45%), Positives = 425/647 (65%), Gaps = 16/647 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS + F    T  +VA++I   LAK  +A  +NG+  D  D +  + S+EIIT +
Sbjct: 4   ITLPDGSQRQFDKPVTVLEVAQNIGAGLAKATIAGRVNGERKDACDLITEDSSLEIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHS AH++  A++ ++P+V++AIGP I++GFYYD D ++  + +++  +EK 
Sbjct: 64  DEDGLEIIRHSTAHLLGHAIKQLFPDVKMAIGPTIDNGFYYDVDLDRSLTQEDIDALEKH 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K  +S ++AR+ FE + E YK+ IL E+I       LY   E+ D+CR
Sbjct: 124 MLELAKTNYDVIKTPVSWQEARDTFEKRGEPYKMAILDENIERTATPALYHHQEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +      F KL K+AGAYWRGDS   ML RIYGTAW  +++L  YL  LEE+ KR
Sbjct: 184 GPHVPNMRFCHHF-KLQKIAGAYWRGDSKNKMLQRIYGTAWADKKQLDAYLQRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQH 303
           DHRK+ + +DL+H+ E+  G++FWH  GW IF+ L +++R K+ + DY+E+  P ++D+ 
Sbjct: 243 DHRKIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW +Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWQNYGDLMFT------TQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+ +E      ++  IY  FGF  I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQIESEVTSCIRMVYDIYSTFGFTNI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPEKR+G+D +WD AE  +   L        + +   +  GEGAFYGPK E+ L
Sbjct: 417 FVKLSTRPEKRIGADDMWDCAEEGLANALKH------NGLEYEIQEGEGAFYGPKIEFAL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D + R+WQCGTIQ+DF LP R NA YV   +++  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 RDCLDREWQCGTIQLDFALPGRLNASYVAEDNDRRTPVMIHRAILGSIERFIGIITEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P QA+V  IT S  EY Q++A  L    L ++TD RNE + +KIREH+++++
Sbjct: 531 GFFPAWLAPTQAVVMNITDSQSEYVQDVAKKLSDAGLRVKTDLRNEKVGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDC 650
           P +++CGDKE     + +R          ++ + + +L K+    D 
Sbjct: 591 PYMLVCGDKEIETGKVAVRTRKGQDLGTFTVEEFLDVLKKQVRNRDL 637


>gi|323499329|ref|ZP_08104306.1| threonyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
 gi|323315717|gb|EGA68751.1| threonyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
          Length = 642

 Score =  682 bits (1759), Expect = 0.0,   Method: Composition-based stats.
 Identities = 298/642 (46%), Positives = 428/642 (66%), Gaps = 17/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  +VA+SI   LAK  +A  ++G+  D  D +  + S+EIIT +
Sbjct: 4   ITLPDGSQRQFDNPVSTLEVAQSIGPGLAKATIAGRVDGERVDACDLIEQDASLEIITVK 63

Query: 66  DP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  AV+ ++PE ++AIGP I++GFYYD D E   + ++L +IEK
Sbjct: 64  DEVDGLEIVRHSCAHLLGHAVKQLFPEAKMAIGPTIDNGFYYDIDLEHSLTQEDLEKIEK 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLC 183
           +M+E+       +K+ +S ++AR+ FE++ E YK+EIL E++   +   LY   E+ D+C
Sbjct: 124 RMKELAKTKYQVIKKKVSWQEARDAFEARGETYKMEILDENVSRDDRPGLYHHEEYIDMC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV   G  + F  L  VAGAYWRG+S+  ML RIYGTA++ ++ L  +L  LEE+ K
Sbjct: 184 RGPHVPHMGFCQHFTLL-NVAGAYWRGNSDNKMLQRIYGTAFHDKKALKAHLTRLEEAAK 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRK+ +++DLFH+ ++  G++FWH  GW IF+ L  ++R K+ +  Y+E+  P ++D+
Sbjct: 243 RDHRKIGKQLDLFHMQQEAPGMVFWHHNGWSIFRDLEVFIRAKLDEYGYQEVKGPLMMDR 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+
Sbjct: 303 VLWERSGHWDKYADAMFT------TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRM 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHG+MRVRGFTQDDAH+FCT+ Q+  E      ++   Y+ FGF+ 
Sbjct: 357 AEFGSCHRNEPSGALHGIMRVRGFTQDDAHIFCTESQIQEEVTSCIKMVYDTYQTFGFDN 416

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+VKLSTRPEKRVGSD +WD +E  +K  L+ +       I   +  GEGAFYGPK E+ 
Sbjct: 417 IVVKLSTRPEKRVGSDEIWDQSEEALKQSLEAMN------IEYELQEGEGAFYGPKIEFT 470

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D + R WQCGT+Q+DFNLP R  A YV+ ++E+  PVMIHRA+ GS+ERFIGI+IE +
Sbjct: 471 LHDCLDRAWQCGTVQLDFNLPGRLGASYVDENNERQVPVMIHRAILGSLERFIGILIEEY 530

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WLSP QA++  IT    +YAQE+A  L+   +  + D RNE I +KIREH++K+
Sbjct: 531 FGFFPTWLSPEQAVIMNITDKQSDYAQEVAQKLQKVGIRAKADLRNEKIGFKIREHTLKR 590

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P +++CGD+E     I +R        K  + D I  +  E
Sbjct: 591 VPYMLVCGDQEMEAGEIAVRTRKGKDLGKFKVDDFISYIQDE 632


>gi|239827997|ref|YP_002950621.1| threonyl-tRNA synthetase [Geobacillus sp. WCH70]
 gi|259516491|sp|C5D639|SYT_GEOSW RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|239808290|gb|ACS25355.1| threonyl-tRNA synthetase [Geobacillus sp. WCH70]
          Length = 644

 Score =  682 bits (1759), Expect = 0.0,   Method: Composition-based stats.
 Identities = 259/652 (39%), Positives = 414/652 (63%), Gaps = 20/652 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M   I++TFPDG++K FP   T   +A SIS  L KKA+A  +N +  DL  P+  +GSI
Sbjct: 1   MSEMIRITFPDGAVKEFPKGTTTEQIAASISPGLKKKAIAGKLNDRFIDLRTPIQEDGSI 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT + P +L ++RHS AH+MA+A++ ++  V++ +GP+IE+GFYYD D E+  + ++L
Sbjct: 61  SIITQDMPEALDILRHSTAHLMAQAIKRLYKNVKLGVGPVIENGFYYDIDMEESLTPEDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IE++M++I+  +   +++ +S E+A  L+E   +  K+E++  IP  E +++Y QGE+
Sbjct: 121 PKIEQEMRKIVKENLEIVRKEVSREEAIRLYEEIGDDLKLELINDIPEGETISIYEQGEF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRG HV STG++K+F KL+ ++GAYWRGDSN  ML RIYGTA+  +++L +YL  L+
Sbjct: 181 FDLCRGVHVPSTGKIKEF-KLLNISGAYWRGDSNNKMLQRIYGTAFFKKEDLDEYLRQLQ 239

Query: 240 ESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           E+++RDHRKL +E++LF  ++    G+  W  KG  I + +  Y+  K  +  Y+ + TP
Sbjct: 240 EAKERDHRKLGKELELFMTSQKVGQGLPLWLPKGATIRRIIERYIVDKEIELGYQHVYTP 299

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    L++ SGHWD Y+ NMF     D+         L+PMNCP H+ ++   + SYRE
Sbjct: 300 VLGSVELYKTSGHWDHYKDNMFPPMEMDN-----EQLVLRPMNCPHHMMIYKSKIHSYRE 354

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+ +E  ++ NLI+ +YKD
Sbjct: 355 LPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKDEFKRVVNLILEVYKD 414

Query: 418 FGFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           FG ++   +LS R           D +W+ A+N+++  +D +       +      GE A
Sbjct: 415 FGLDEYSFRLSYRDPHDKEKYYDDDEMWEKAQNMLREAMDELG------LEYYEAEGEAA 468

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  ++ A+G+D    T+Q+DF LP RF+  Y+    +   PV+IHR V  ++ER
Sbjct: 469 FYGPKLDVQVRTALGKDETLSTVQLDFLLPERFDLTYIGEDGKPHRPVVIHRGVVSTMER 528

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITS-SAVEYAQEIANLLKSHHLSIETDFRNETIN 592
           F+  +IE +KG  P WL+P+Q  V  ++  + ++YA ++   L+S    +E D R+E I 
Sbjct: 529 FVAFLIEEYKGAFPTWLAPVQVEVIPVSPAAHLDYAYKVKEALQSQGFRVEVDERDEKIG 588

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           YKIRE  I+KIP +++ GDKE +E ++ +R++G   ++ +SL D I  L  E
Sbjct: 589 YKIREAQIQKIPYMLVVGDKEMAENAVNVRKYGEQKSETMSLDDFIAALKAE 640


>gi|163740958|ref|ZP_02148351.1| threonyl-tRNA synthetase [Phaeobacter gallaeciensis 2.10]
 gi|161385949|gb|EDQ10325.1| threonyl-tRNA synthetase [Phaeobacter gallaeciensis 2.10]
          Length = 648

 Score =  682 bits (1759), Expect = 0.0,   Method: Composition-based stats.
 Identities = 325/652 (49%), Positives = 435/652 (66%), Gaps = 10/652 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
           + + LTFPDG+ +++    T ++VA SIS SLAKKA++  +NG   DL  P+  + +I I
Sbjct: 2   AQVSLTFPDGNARSYDAGVTPAEVAASISTSLAKKAISATVNGAHWDLQWPIDSDAAIAI 61

Query: 62  ITPEDPR-SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            T +D   +  +IRH  AH+MA AVQ IWP+ +V IGP+IE+G+YYDFD+ +PF+ ++L 
Sbjct: 62  HTMKDEEQANELIRHDLAHVMARAVQDIWPDTKVTIGPVIENGWYYDFDRAEPFTPEDLG 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEKKM+EII +      +    ++A + +    E YKVE++ESIP  E + +Y  G+W 
Sbjct: 122 TIEKKMKEIINKRDAVRTEVWDRDRAIQHYTDLNEPYKVELIESIPGDEPLRMYWHGDWQ 181

Query: 181 DLCRGPHVRSTGQ-VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           DLCRGPH++ TGQ     FKLM +AGAYWRGDS+R ML RIYG A+  +++L  +L+ LE
Sbjct: 182 DLCRGPHLQHTGQLPGDAFKLMSIAGAYWRGDSDRAMLQRIYGVAFTGKEKLKAHLHMLE 241

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+ KRDHRKL REM+LFH+ E+  G IFWH  GWKI+ TL  YMRR + +D Y E+NTPQ
Sbjct: 242 EAAKRDHRKLGREMNLFHMQEEAPGQIFWHPNGWKIYTTLQDYMRRMQDRDGYVEVNTPQ 301

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW+ SGHWD Y+ NMF V+  +D  ++    ALKPMNCP HV VFN GLKSYR+L
Sbjct: 302 VVDRKLWEASGHWDKYQENMFIVEVDEDHAREKAVNALKPMNCPCHVQVFNQGLKSYRDL 361

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFGS  R EPSG+LHG+MRVRGFTQDD H+FC ++Q+ +E  K    +  +Y D 
Sbjct: 362 PLRMAEFGSCARYEPSGALHGIMRVRGFTQDDGHIFCAEDQIESETAKFIAFLSKVYADL 421

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF    +KLSTRPEKR+GSD  WD  E  +                  +L GEGAFYGPK
Sbjct: 422 GFHDWTIKLSTRPEKRIGSDESWDLVEKALGDACKAAGY------EYELLEGEGAFYGPK 475

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ L DAIGR+WQCGT+QVD NLP R +A ++     K  P M+HRA  GS ERFIGI+
Sbjct: 476 LEFTLTDAIGRNWQCGTLQVDPNLPERLDANFIGQDGSKHRPFMLHRATLGSFERFIGIL 535

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE   G LP WL+P Q +V +ITS A +Y  E+   L++  +  E D RNE INYK+REH
Sbjct: 536 IEEHAGKLPFWLAPRQVVVASITSDADDYVNEVVETLRAAGVRAEADIRNEKINYKVREH 595

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDC 650
           S+ K+P+I+  G +E  ER++ +RR G   T+  +L      L  E+ PPD 
Sbjct: 596 SVGKVPVILAVGHREVEERTVSVRRLGEKQTKVEALEAVTKALAVEATPPDL 647


>gi|269468339|gb|EEZ80013.1| threonyl-tRNA synthetase [uncultured SUP05 cluster bacterium]
          Length = 630

 Score =  682 bits (1759), Expect = 0.0,   Method: Composition-based stats.
 Identities = 301/640 (47%), Positives = 438/640 (68%), Gaps = 15/640 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDG+ K+F       +VA+SI   LAK  +A  +NG++ D S  +  + S+ IIT +
Sbjct: 4   ITLPDGTEKSFDQPLNVFEVAKSIGSGLAKATLAGKVNGEMVDASYMIEADASVSIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L VIRHS AH++A+A Q ++P+ QV IGP+I++GF+YDF  +  FS  +LA+IEK 
Sbjct: 64  DEEGLEVIRHSTAHLLAQATQMLYPDAQVTIGPVIDNGFFYDFAYKDGFSEGDLAKIEKN 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M  ++ ++    +  +  ++A + F+ K E YK EI+ESIPA + ++LY+QG++ DLCRG
Sbjct: 124 MNHLVKQNLKIERSEMGRDEAVQFFKDKGEYYKAEIIESIPADQTLSLYQQGDFIDLCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV ST ++K F KLMK+AGAYWRGDSN  ML R+YGTAW ++ +L  YLY LEE+EKRD
Sbjct: 184 PHVPSTAKLKAF-KLMKLAGAYWRGDSNNEMLQRVYGTAWASKDDLKDYLYRLEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHL 304
           HRK+ +  DLFH+ E+  G++FWH KGW ++Q +  YMR   + +DY+E++TPQ++D+ L
Sbjct: 243 HRKIGKTQDLFHMQEEAPGMVFWHEKGWTLYQIVEQYMRSVFRDNDYKEVHTPQLIDRTL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHWD +   MF       T  + R +A+KPMNCP H+ ++N GLKSYR+LP+RLAE
Sbjct: 303 WEKSGHWDKFGDAMFT------TSSENRDYAVKPMNCPAHIQIYNQGLKSYRDLPLRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNEPSG+LHG+MRVR F QDD H+FCT+ Q+ +E     +L   +YK+FGFE + 
Sbjct: 357 FGSCHRNEPSGTLHGIMRVRNFVQDDGHIFCTENQIQDEVSTFIDLTFDVYKNFGFENVD 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +KLSTRPEKRVGSD +WD AE  +   LD         I   +  GEGAFYGPK E++LK
Sbjct: 417 IKLSTRPEKRVGSDEVWDRAEASLAEALDA------KGIKWELQEGEGAFYGPKIEFVLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D + R+WQCGT+QVDF++P R +A Y+   + K  PVM+HRA+ GS+ERF+GI+IE+++G
Sbjct: 471 DCLDREWQCGTLQVDFSMPERLDAHYIAEDNSKQTPVMLHRAIVGSLERFVGILIEHYEG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P WL+PIQA++  I+    ++   +   LK   L + +D RNE I +KIREHS+++ P
Sbjct: 531 AFPSWLAPIQAVILNISEKQHDFVANVEKKLKKQGLRVISDLRNEKIGFKIREHSMQRYP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            I++ G +E     I +R+ G      +S+   + ++ ++
Sbjct: 591 YILVVGGREMENDEISVRKRGGEDLGSMSIEAFVKLVKED 630


>gi|205352944|ref|YP_002226745.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|238690498|sp|B5RAX3|SYT_SALG2 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|205272725|emb|CAR37641.1| Threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|326628018|gb|EGE34361.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 9]
          Length = 642

 Score =  681 bits (1758), Expect = 0.0,   Method: Composition-based stats.
 Identities = 300/655 (45%), Positives = 432/655 (65%), Gaps = 19/655 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D SD +  + ++
Sbjct: 1   MPV---ITLPDGSQRHYDHPVSPMDVALDIGPGLAKATIAGRVNGELVDASDLIENDATL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L +IRHSCAH++  A++ +WP  ++AIGP++++GFYYD D ++  + +++
Sbjct: 58  AIITAKDEEGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVVDNGFYYDVDLDRTLTQEDV 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M E+  ++   +K+ +S   ARE F  + E YKV IL E+I   +   LY   E
Sbjct: 118 EALEKRMHELAEKNYDVIKKKVSWHDARETFVKRGETYKVAILDENIAHDDKPGLYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KLMK AGAYWRGDSN  ML RIYGTAW  ++ L  YL  L
Sbjct: 178 YVDMCRGPHVPNMRFCHHF-KLMKTAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF+ L  ++R K+K+  Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++ + LW+++GHWD+Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 297 FMMGRVLWEKTGHWDNYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  
Sbjct: 351 LPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQIRDEVNACIRMVYDMYST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI+VKLSTRP+KR+GSD +WD AE  +   L+      ++ I     LGEGAFYGP
Sbjct: 411 FGFEKIVVKLSTRPDKRIGSDEMWDRAEADLAVALE------ENNIPFEYQLGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF+LPSR +A YV   +E+  PVMIHRA+ GS+ERFIGI
Sbjct: 465 KIEFTLYDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E F G  P WL+P+Q +V  IT S  EY  E+   L++  + ++ D RNE I +KIRE
Sbjct: 525 LTEEFAGFFPTWLAPVQVVVMNITDSQSEYVNELTQKLQNAGIRVKADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           H+++++P +++CGDKE     + +R         + + D I  L +E      Q+
Sbjct: 585 HTLRRVPYMLVCGDKEVEAGKVAVRTRRGKDLGSLDVNDVIEKLQQEIRSRSLQQ 639


>gi|56551661|ref|YP_162500.1| threonyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4]
 gi|260752754|ref|YP_003225647.1| threonyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
 gi|73919847|sp|Q5NPH1|SYT_ZYMMO RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|56543235|gb|AAV89389.1| threonyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4]
 gi|258552117|gb|ACV75063.1| threonyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
          Length = 659

 Score =  681 bits (1758), Expect = 0.0,   Method: Composition-based stats.
 Identities = 313/664 (47%), Positives = 444/664 (66%), Gaps = 18/664 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M   I++T  D S +      T + +A SIS SLAKKA+A   NG++ DLS P+  +G +
Sbjct: 1   MAEKIRITLIDNSEREVLQGTTTTQIAASISTSLAKKALAARFNGQMIDLSQPLLEDGRL 60

Query: 60  EIITPEDP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSD 117
           EIIT E+   +L ++RH  AHI+AEAVQ ++P  Q+  GP+ +DGFYYDF  K++PF+ +
Sbjct: 61  EIITAENEAEALELVRHDYAHILAEAVQKLFPGTQITFGPVTDDGFYYDFAPKDRPFTEE 120

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +L  IE +M++IIA+++  +++    +K   L+ES+ E +K E  + +P  + +T+YR G
Sbjct: 121 DLPLIEAEMRKIIAQNNALVREVWERDKLISLWESQGEKFKAEWAKELPEGQELTIYRAG 180

Query: 178 EWFDLCRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           EWFD+CRGPH+ STG++  K FKL +V+GAYWRGD N  MLSRIYGT W   ++L  +L 
Sbjct: 181 EWFDMCRGPHLPSTGKLDPKAFKLTRVSGAYWRGDQNNAMLSRIYGTGWLNAKQLKAHLE 240

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEIN 295
            LEE++KRDHR+L +EMDLFH+ ++  G +FWH  G+ I+  L +Y+RR++   +Y+E+ 
Sbjct: 241 RLEEAQKRDHRRLGQEMDLFHLQQEAQGSVFWHPNGYTIWLQLEAYLRRRMKNANYKEVK 300

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT--------FALKPMNCPGHVAV 347
           TPQ++D  LW+ SGHW  +R NMF V     +    +          ALKPMNCP H+ +
Sbjct: 301 TPQLMDAALWEASGHWGKFRENMFVVPDEIPSTDPDKPVLSGKGNLMALKPMNCPAHIQI 360

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
           F  G++SYRELP+R+ EFG  +RNE  G+LHGLMRVR  TQDDAH+FCT EQ+  E    
Sbjct: 361 FKQGIRSYRELPLRMLEFGCCHRNEAHGALHGLMRVRQLTQDDAHIFCTAEQIVTETKDF 420

Query: 408 HNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGV 467
            NL+ SIY+D GF    VKLS RPE R G D LWD+AEN ++  L+ +  +     +   
Sbjct: 421 VNLLDSIYRDLGFTSYAVKLSLRPELRAGDDELWDNAENGLRSALEQVGIT-----DYEE 475

Query: 468 LLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAV 527
           L GEGAFYGPK E+ L DAIGR WQCGT+Q+D+ LP R +A YV     +  PVM+HRA+
Sbjct: 476 LPGEGAFYGPKLEFHLTDAIGRTWQCGTLQLDYVLPERLDASYVAEDGSRKRPVMLHRAI 535

Query: 528 FGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR 587
            G+ ERFIGI+IE+  G  PLW++P+QA+V TI S A  +A+ +   +K+  L + +D R
Sbjct: 536 IGTFERFIGILIEHHAGRFPLWMAPVQAVVATIVSEADSFAESVVEKMKAAGLRVVSDIR 595

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLP 647
           NE INYKIREHS+ K+P I++ G +EA E  + IR+ GS     +S+ +AI +L +E+ P
Sbjct: 596 NEKINYKIREHSLTKVPNILVVGKREAEEGKVAIRKLGSRDQIILSVDEAIALLLEEATP 655

Query: 648 PDCQ 651
           PD +
Sbjct: 656 PDLK 659


>gi|241761215|ref|ZP_04759303.1| threonyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC
           10988]
 gi|241374122|gb|EER63619.1| threonyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC
           10988]
          Length = 659

 Score =  681 bits (1758), Expect = 0.0,   Method: Composition-based stats.
 Identities = 313/664 (47%), Positives = 444/664 (66%), Gaps = 18/664 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M   I++T  D S +      T + +A SIS SLAKKA+A   NG++ DLS P+  +G +
Sbjct: 1   MAEKIRITLIDNSEREVLQGTTTTQIAASISTSLAKKALAARFNGQMIDLSQPLLEDGRL 60

Query: 60  EIITPEDP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSD 117
           EIIT E+   +L ++RH  AHI+AEAVQ ++P  Q+  GP+ +DGFYYDF  K++PF+ +
Sbjct: 61  EIITAENEAEALELVRHDYAHILAEAVQKLFPGTQITFGPVTDDGFYYDFAPKDRPFTEE 120

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +L  IE +M++IIA+++  +++    +K   L+ES+ E +K E  + +P  + +T+YR G
Sbjct: 121 DLPLIEAEMRKIIAQNNALVREVWERDKLISLWESQGEKFKAEWAKELPEGQELTIYRAG 180

Query: 178 EWFDLCRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           EWFD+CRGPH+ STG++  K FKL +V+GAYWRGD N  MLSRIYGT W   ++L  +L 
Sbjct: 181 EWFDMCRGPHLPSTGKLDPKAFKLTRVSGAYWRGDQNNAMLSRIYGTGWLNAKQLKVHLE 240

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEIN 295
            LEE++KRDHR+L +EMDLFH+ ++  G +FWH  G+ I+  L +Y+RR++   +Y+E+ 
Sbjct: 241 RLEEAQKRDHRRLGQEMDLFHLQQEAQGSVFWHPNGYTIWLQLEAYLRRRMKNANYKEVK 300

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT--------FALKPMNCPGHVAV 347
           TPQ++D  LW+ SGHW  +R NMF V     +    +          ALKPMNCP H+ +
Sbjct: 301 TPQLMDAALWEASGHWGKFRENMFVVPDEIPSTDPDKPVLSGKGNLMALKPMNCPAHIQI 360

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
           F  G++SYRELP+R+ EFG  +RNE  G+LHGLMRVR  TQDDAH+FCT EQ+  E    
Sbjct: 361 FKQGIRSYRELPLRMLEFGCCHRNEAHGALHGLMRVRQLTQDDAHIFCTAEQIVTETKDF 420

Query: 408 HNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGV 467
            NL+ SIY+D GF    VKLS RPE R G D LWD+AEN ++  L+ +  +     +   
Sbjct: 421 VNLLDSIYRDLGFTSYAVKLSLRPELRAGDDELWDNAENGLRSALEQVGIT-----DYEE 475

Query: 468 LLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAV 527
           L GEGAFYGPK E+ L DAIGR WQCGT+Q+D+ LP R +A YV     +  PVM+HRA+
Sbjct: 476 LPGEGAFYGPKLEFHLTDAIGRTWQCGTLQLDYVLPERLDASYVAEDGSRKRPVMLHRAI 535

Query: 528 FGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR 587
            G+ ERFIGI+IE+  G  PLW++P+QA+V TI S A  +A+ +   +K+  L + +D R
Sbjct: 536 IGTFERFIGILIEHHAGRFPLWMAPVQAVVATIVSEADSFAESVVEKMKAAGLRVVSDIR 595

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLP 647
           NE INYKIREHS+ K+P I++ G +EA E  + IR+ GS     +S+ +AI +L +E+ P
Sbjct: 596 NEKINYKIREHSLTKVPNILVVGKREAEEGKVAIRKLGSRDQIILSVDEAIALLLEEATP 655

Query: 648 PDCQ 651
           PD +
Sbjct: 656 PDLK 659


>gi|332798664|ref|YP_004460163.1| threonyl-tRNA synthetase [Tepidanaerobacter sp. Re1]
 gi|332696399|gb|AEE90856.1| threonyl-tRNA synthetase [Tepidanaerobacter sp. Re1]
          Length = 636

 Score =  681 bits (1758), Expect = 0.0,   Method: Composition-based stats.
 Identities = 284/641 (44%), Positives = 425/641 (66%), Gaps = 16/641 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
             +K++  DG  K +    T  ++AE+ISR L K+A+A  ++G + DLS  V ++ +++ 
Sbjct: 2   EQVKVSLKDGVEKVYQKGITLLEIAENISRKLGKEALAAKVDGAIKDLSSKVDKDCNVKF 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +T ED     V  HS +H+MA+AV+ ++PE ++AIGP I++GFYYDFD+++ F+  +L +
Sbjct: 62  LTFEDEEGRKVFWHSSSHVMAQAVKRLFPETKLAIGPAIDEGFYYDFDRDESFTPSDLEK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE++M +IIA D  F ++ +S E+A E      E YKVE++E++P    ++ Y+QGE+ D
Sbjct: 122 IEQEMAKIIAEDYAFCRKNVSKEEAIEELNKINEPYKVELVEALPEGAPISFYQQGEFKD 181

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LC GPH+ STG++K F KL  +AGAYWRGD +  ML RIYG ++  +  L +YL  +EE+
Sbjct: 182 LCAGPHIPSTGRIKAF-KLTSLAGAYWRGDEHNKMLQRIYGISFPKKSMLDEYLTRIEEA 240

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVL 300
           ++RDHRKL +E+DLF I E+G G  F+H KG  I+  L  + R++  K  Y+EI TP +L
Sbjct: 241 KRRDHRKLGKELDLFSIHEEGPGFPFFHPKGMIIWNLLTDFWRKEHSKRGYQEIKTPIIL 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ LW++SGHWD Y+ NM+  K       D   +A+KPMNCPG + ++    +SYR+LP+
Sbjct: 301 NEELWRRSGHWDHYKENMYFTKI------DDMNYAVKPMNCPGGILMYKTDSRSYRDLPI 354

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RL E G V+R+E SG LHGLMRVR FTQDDAH+F    Q+ +E + + +L+   Y+ FGF
Sbjct: 355 RLGELGLVHRHELSGVLHGLMRVRCFTQDDAHIFMMPSQIEDEIIGVIDLVDYFYQIFGF 414

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           E   V+LSTRPE  +GSD LWD A   ++G LD      +  ++  +  G+GAFYGPK +
Sbjct: 415 EYN-VELSTRPENSMGSDELWDQATAALQGALD------KKGMSYKINEGDGAFYGPKID 467

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           + LKD++GR WQCGTIQ+DF +P RF+  Y+ +  EK  PVMIHR +FGSIERFIGI+IE
Sbjct: 468 FHLKDSLGRTWQCGTIQLDFQMPERFDLSYIGADGEKHRPVMIHRVIFGSIERFIGILIE 527

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           ++ G  P+WL+P+QA V  I+   ++YA ++   L+   + +E D RNE I YK+R+  +
Sbjct: 528 HYAGAFPVWLAPVQARVLPISEKHMDYAYKVKKQLEEAGIRVEVDERNEKIGYKVRDAQM 587

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           KKIP ++I GDKEA+E ++ +R        +  +   I  +
Sbjct: 588 KKIPYMLIVGDKEANENTVSVRTREKGDVGQKPIETFIDEV 628


>gi|152978995|ref|YP_001344624.1| threonyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
 gi|171704313|sp|A6VNZ2|SYT_ACTSZ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|150840718|gb|ABR74689.1| threonyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
          Length = 643

 Score =  681 bits (1758), Expect = 0.0,   Method: Composition-based stats.
 Identities = 301/648 (46%), Positives = 434/648 (66%), Gaps = 16/648 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPE 65
           +T PDGS + F    +  +VA+SI   LAK  +A  +NG+  D  D + + S +EIIT +
Sbjct: 4   ITLPDGSQRQFDNPVSVLEVAQSIGSGLAKATIAGRVNGERRDACDMINDDSTLEIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ ++P+V++AIGP IE+GFYYD D ++  + ++L  +EK+
Sbjct: 64  DEDGLEIIRHSCAHLLGHAIKQLFPDVKMAIGPTIENGFYYDVDLDRSLTQEDLDTLEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +KQ ++ ++AR+ FE + E YK+ IL E+I   ++  LY   E+ D+CR
Sbjct: 124 MSELAKTNYDVVKQRVTWQEARDTFEKRGEPYKMAILDENIAKDDHPALYHHQEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +      F KLMKVAGAYWRGDS   ML RIYGTAW  +++L  YL  LEE+ KR
Sbjct: 184 GPHVPNMRFCHHF-KLMKVAGAYWRGDSKNKMLQRIYGTAWADKKQLNGYLTRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ + +DL+H+ E+  G++FWH  GW +F+ L +++R K+K+ DY+E+  P ++D+ 
Sbjct: 243 DHRKIGKALDLYHMQEEAPGMVFWHNDGWTVFRELETFVRTKLKEYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW +Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWQNYGDLMFT------TQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+ +E      ++  IY  FGF  I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQIESEVTSCIRMVYDIYGTFGFTDI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPEKR+G+D +WD AE  +   L        + +   +  GEGAFYGPK E+ L
Sbjct: 417 AVKLSTRPEKRIGADEMWDRAEQGLANALKH------NALEYEIQEGEGAFYGPKIEFAL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D + R+WQCGTIQ+DF LP R NA YV   +++  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 RDCLDREWQCGTIQLDFALPGRLNASYVAEDNDRRTPVMIHRAILGSIERFIGIITEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+QA+V  IT S  EY Q++   L    L ++ D RNE + +K+REH+++++
Sbjct: 531 GFFPAWLAPVQAVVMNITDSQAEYVQKVVKQLSDAGLRVKADLRNEKVGFKVREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           P +++CGDKE +E  + +R    T      + D I IL ++    + +
Sbjct: 591 PYMLVCGDKEIAEGKVSVRTRRGTDLGTYDVEDFIEILKQQVRGRELK 638


>gi|328472989|gb|EGF43837.1| threonyl-tRNA synthetase [Vibrio parahaemolyticus 10329]
          Length = 642

 Score =  681 bits (1758), Expect = 0.0,   Method: Composition-based stats.
 Identities = 295/642 (45%), Positives = 427/642 (66%), Gaps = 17/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  +VA+SI   LAK  +A  +NG   D  D +  + S+EIIT +
Sbjct: 4   ITLPDGSQRQFDNPVSTMEVAQSIGPGLAKATIAGRVNGNRVDACDLIEEDASLEIITVK 63

Query: 66  DP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  A++ ++P+ ++AIGP I++GFYYD D ++  + ++L +IE+
Sbjct: 64  DEVDGLEIVRHSCAHLLGHALKQLYPQAKMAIGPTIDNGFYYDIDLDESLTQEDLEKIEQ 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLC 183
           +M+E+       +K+ +S ++AR+ FES+ E YKVEIL E++   +   LY   E+ D+C
Sbjct: 124 RMKELAKTKYEVVKKKVSWQEARDTFESRGEPYKVEILDENVSRDDRPGLYHHEEYIDMC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV + G  + F  L  VAGAYWRG+S+  ML RIYGTA++ ++ L  +L  LEE+ K
Sbjct: 184 RGPHVPNMGFCQHFTLL-NVAGAYWRGNSDNKMLQRIYGTAFHDKKALKAHLTRLEEAAK 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRK+ +++DLFH+ ++  G++FWH  GW IF+ L  ++R K+ + DY+E+  P ++D+
Sbjct: 243 RDHRKIGKQLDLFHMQQEAPGMVFWHHNGWSIFRDLEVFVRDKLNEYDYQEVKGPLMMDR 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+
Sbjct: 303 VLWERSGHWDKYADAMFT------TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRM 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHG+MRVRGFTQDDAH+FCT+ Q+  E      ++   Y+ FGF+ 
Sbjct: 357 AEFGSCHRNEPSGALHGIMRVRGFTQDDAHIFCTESQIQEEVTSCIKMVYDTYQTFGFDN 416

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+VKLSTRPEKRVGSD +WD +E  +K  L++++      I   +  GEGAFYGPK E+ 
Sbjct: 417 IVVKLSTRPEKRVGSDEIWDQSEEALKQSLESME------IPYEIQEGEGAFYGPKIEFT 470

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D + R WQCGT+Q+DFNLP R  A YV  ++E+  PVMIHRA+ GS+ERFIGI+IE +
Sbjct: 471 LYDCLDRAWQCGTVQLDFNLPGRLGATYVGENNERLVPVMIHRAILGSLERFIGILIEEY 530

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P QA++  IT     Y QEI   L+   +  + D RNE I +KIREH++K+
Sbjct: 531 AGFFPTWLAPEQAVLMNITDKQSGYVQEIVQKLQKSGIRAKADLRNEKIGFKIREHTLKR 590

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P +++ GD+E     I +R        K  + D I  +  E
Sbjct: 591 VPYMLVVGDQEMEAGEIAVRTRKGKDLGKFKVDDFIAYIQDE 632


>gi|260777881|ref|ZP_05886774.1| threonyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
 gi|260605894|gb|EEX32179.1| threonyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
          Length = 642

 Score =  681 bits (1758), Expect = 0.0,   Method: Composition-based stats.
 Identities = 297/642 (46%), Positives = 427/642 (66%), Gaps = 17/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  +VA+SI   LAK  +A  ++G   D  D +  + S+EIIT +
Sbjct: 4   ITLPDGSQRQFDNPVSTLEVAQSIGPGLAKATIAGRVDGNRVDACDLIEQDASLEIITVK 63

Query: 66  DP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  A++ ++PE ++AIGP I++GFYYD D E   + ++L +IEK
Sbjct: 64  DEVDGLEIVRHSCAHLLGHAIKQLFPEAKMAIGPTIDNGFYYDIDLEHSLTQEDLDKIEK 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLC 183
           +M+E+       +K+ +S ++AR+ FE++ E YK+EIL E++   +   LY   E+ D+C
Sbjct: 124 RMKELAKTKYQVIKKKVSWQEARDAFEARGETYKIEILDENVSRDDRPGLYHHEEYIDMC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV   G  + F  L  VAGAYWRG+S+  ML RIYGTA++ ++ L  +L  LEE+ K
Sbjct: 184 RGPHVPHMGFCQHFTLL-NVAGAYWRGNSDNKMLQRIYGTAFHDKKALKAHLTRLEEAAK 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRK+ +++DLFH+ ++  G++FWH  GW IF+ L  ++R K+ +  Y+E+  P ++D+
Sbjct: 243 RDHRKIGKQLDLFHMQQEAPGMVFWHHNGWSIFRDLEVFIRAKLDEYGYQEVKGPLMMDR 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+
Sbjct: 303 VLWERSGHWDKYADAMFT------TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRM 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHG+MRVRGFTQDDAH+FCT+ Q+  E      ++   Y+ FGF+ 
Sbjct: 357 AEFGSCHRNEPSGALHGIMRVRGFTQDDAHIFCTESQIQEEVTSCIKMVYDTYQTFGFDN 416

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+VKLSTRPEKRVGSD +WD +E  +K  L+ +       I   +  GEGAFYGPK E+ 
Sbjct: 417 IVVKLSTRPEKRVGSDEIWDQSEEALKQSLEAMN------IEYELQEGEGAFYGPKIEFT 470

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D + R WQCGT+Q+DFNLP R  A YV+ ++E+  PVMIHRA+ GS+ERFIGI+IE +
Sbjct: 471 LHDCLDRAWQCGTVQLDFNLPGRLGATYVDENNERQVPVMIHRAILGSLERFIGILIEEY 530

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WLSP QA++  IT    +YAQE+A  L+   +  + D RNE I +KIREH++K+
Sbjct: 531 FGFFPTWLSPEQAVIMNITDKQSDYAQEVAQKLQKCGIRAKADLRNEKIGFKIREHTLKR 590

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P +++CGD+E     I +R        K  + D I  +  E
Sbjct: 591 VPYMLVCGDQEMEAGEIAVRTRKGKDLGKFKVDDFISYIQDE 632


>gi|254477067|ref|ZP_05090453.1| threonyl-tRNA synthetase [Ruegeria sp. R11]
 gi|214031310|gb|EEB72145.1| threonyl-tRNA synthetase [Ruegeria sp. R11]
          Length = 648

 Score =  681 bits (1758), Expect = 0.0,   Method: Composition-based stats.
 Identities = 322/652 (49%), Positives = 433/652 (66%), Gaps = 10/652 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEI 61
           + I LTFPDG+ +++    T ++VA SIS SL KKA++  +N +  DL  P+ +  +I I
Sbjct: 2   AQISLTFPDGNARSYDAGITPAEVAASISTSLGKKAISATVNDQHWDLQWPINDDAAIAI 61

Query: 62  ITPEDPR-SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            T +D   +  +IRH  AHIMA AVQ IWP+ +V IGP+I++G+YYDFD+ +PF+ ++L 
Sbjct: 62  HTMKDEEQANELIRHDLAHIMARAVQEIWPDTKVTIGPVIDNGWYYDFDRAEPFTPEDLG 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEKKM++II +      +    ++A + +    E YKVE++ESIP  E + +Y  G+W 
Sbjct: 122 AIEKKMKDIINKRDEVRTEVWERDRAIQHYTDNNEPYKVELIESIPGDEPLRMYWHGDWQ 181

Query: 181 DLCRGPHVRSTGQ-VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           DLCRGPH++ TGQ     FKLM +AGAYWRGDS+R ML RIYG A+  +++L  +L  LE
Sbjct: 182 DLCRGPHLQHTGQVPGDAFKLMSIAGAYWRGDSDRAMLQRIYGVAFTGKEKLKAHLTMLE 241

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+ KRDHRKL +EM LFH+ E+  G +FWH  GW+I+  L  YMRR + +D Y E+NTPQ
Sbjct: 242 EAAKRDHRKLGKEMGLFHMQEEAPGQVFWHPNGWRIYTQLQDYMRRMQDRDGYVEVNTPQ 301

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHWD Y+ NMF V+  +D  ++    ALKPMNCP HV VFN GLKSYR+L
Sbjct: 302 VVDRKLWEKSGHWDKYQENMFIVEVDEDHAREKAVNALKPMNCPCHVQVFNQGLKSYRDL 361

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFGS  R EPSG+LHG+MRVRGFTQDD H+FC ++Q+ +E  K    +  +Y D 
Sbjct: 362 PLRMAEFGSCARYEPSGALHGIMRVRGFTQDDGHIFCAEDQITSETAKFIAFLSKVYADL 421

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF    +KLSTRPEKR+GSD  WD  E  +               +  +L GEGAFYGPK
Sbjct: 422 GFHNWTIKLSTRPEKRIGSDETWDHMEQALGEACKAAGY------DFEILEGEGAFYGPK 475

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ L DAIGR+WQCGT+QVD NLP R  A ++     K  PVM+HRA  GS ERFIGI+
Sbjct: 476 LEFTLTDAIGRNWQCGTLQVDANLPERLEATFIGQDGAKHRPVMLHRACLGSFERFIGIL 535

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE   G LP WL+P Q +V +ITS A +Y  E+   LK+  +  E D RNE INYK+REH
Sbjct: 536 IEEHAGKLPFWLAPRQVVVASITSEADDYVLEVVEQLKAAGVRAEADMRNEKINYKVREH 595

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDC 650
           S+ K+P+I+  G +E  ER++ +RR G   T+  SL      L  E+ PPD 
Sbjct: 596 SVGKVPVILAVGAREVEERTVSVRRLGEKQTKVESLETVTKTLATEATPPDL 647


>gi|37680129|ref|NP_934738.1| threonyl-tRNA synthetase [Vibrio vulnificus YJ016]
 gi|37198875|dbj|BAC94709.1| threonyl-tRNA synthetase [Vibrio vulnificus YJ016]
          Length = 655

 Score =  681 bits (1758), Expect = 0.0,   Method: Composition-based stats.
 Identities = 291/642 (45%), Positives = 426/642 (66%), Gaps = 17/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  DVA SI   LAK  +A  +NG+  D  D +  + S+EIIT +
Sbjct: 17  ITLPDGSQRQFDNSVSTMDVALSIGPGLAKATIAGRVNGQRVDACDLIEEDASLEIITTK 76

Query: 66  DP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  A++ ++P  ++AIGP I++GFYYD D E+  + ++L +IE 
Sbjct: 77  DEVDGLEIVRHSCAHLLGHALKQLYPNAKMAIGPTIDNGFYYDIDLEESLTQEDLEKIEA 136

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLC 183
           +M+ +       +K+ +S ++AR+ FE++ E YK+EIL E++   +   LY   E+ D+C
Sbjct: 137 RMKALAKTKYQVIKKKVSWQEARDAFEARGETYKMEILDENVSRDDRPGLYHHEEYIDMC 196

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +    + F  L  VAGAYWRG+S+  ML RIYGTA++ ++ L  +L  LEE+ K
Sbjct: 197 RGPHVPNMSFCQHFTLL-NVAGAYWRGNSDNKMLQRIYGTAFHDKKALKDHLTRLEEAAK 255

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRK+ +++DLFH+ ++  G++FWH  GW +F+ L  ++R K+ +  Y+E+  P ++D+
Sbjct: 256 RDHRKIGKQLDLFHMQQEAPGMVFWHHNGWSVFRDLEVFIREKLTEYGYQEVKGPLMMDR 315

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+
Sbjct: 316 VLWERSGHWDKYADAMFT------TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRM 369

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHG+MRVRGFTQDDAH+FCT+ Q+ +E      ++   Y+ FGF+ 
Sbjct: 370 AEFGSCHRNEPSGALHGIMRVRGFTQDDAHIFCTESQIQDEVTNCIKMVYDTYQTFGFDN 429

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I VKLSTRPE+RVGSD +WD +E  +K  L+++       I   +  GEGAFYGPK E+ 
Sbjct: 430 IAVKLSTRPEQRVGSDEIWDQSEEALKQALESM------DIAYEIQEGEGAFYGPKIEFT 483

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D +GR WQCGT+Q+DFNLP+R  A YV  ++E+  PVMIHRA+ GS+ERFIGI+IE +
Sbjct: 484 LFDCLGRAWQCGTVQLDFNLPNRLGATYVGENNERLVPVMIHRAILGSLERFIGILIEEY 543

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P QA++  IT    +Y QEIA  L+   +  + D RNE I +KIREH++K+
Sbjct: 544 AGFFPTWLAPEQAVIMNITDKQADYVQEIAQKLQKCGIRAKADLRNEKIGFKIREHTLKR 603

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P +++CGD+E     I +R        K  + D +  +  +
Sbjct: 604 VPFMLVCGDQEMEAGEIAVRTRKGNDLGKFKVDDFVSYIQDQ 645


>gi|260774298|ref|ZP_05883213.1| threonyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
 gi|260611259|gb|EEX36463.1| threonyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
          Length = 642

 Score =  681 bits (1758), Expect = 0.0,   Method: Composition-based stats.
 Identities = 302/642 (47%), Positives = 427/642 (66%), Gaps = 17/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  DVA+SI   LAK  +A  I+G+  D  D +  + S+EIIT +
Sbjct: 4   ITLPDGSQRQFDHPVSTMDVAQSIGPGLAKATIAGRIDGRRVDACDLIEHDASLEIITVK 63

Query: 66  DP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  A++ ++P+ ++AIGP I+ GFYYD D +   S ++L +IE+
Sbjct: 64  DEADGLEIVRHSCAHLLGHALKQLYPQAKMAIGPTIDSGFYYDIDLDHSLSQEDLERIEQ 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLC 183
           +M++++      +K  +S ++AR+ FES+ E YK+EIL E++   +   LY   E+ D+C
Sbjct: 124 RMKDLVKTKYAVVKHKVSWQEARDTFESRGEPYKIEILDENVARDDRPGLYHHEEYIDMC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV   G  + F KL+ VAGAYWRG+S+  ML R+YGTA++ ++ L  +L  LEE+ K
Sbjct: 184 RGPHVPHMGFCQHF-KLLSVAGAYWRGNSDNKMLQRVYGTAFHDKKALQAHLTRLEEAAK 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRK+ +++DLFH+ ++  G++FWH  GW IF+ L  ++R K+ + DY+E+  P ++D+
Sbjct: 243 RDHRKIGKQLDLFHMQQEAPGMVFWHHNGWSIFRDLEVFIRHKLTEYDYQEVKGPLMMDR 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+
Sbjct: 303 VLWERSGHWDKYADAMFT------TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRM 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSGSLHG+MRVRGFTQDDAH+FCT++Q+  E      ++   Y  FGFE 
Sbjct: 357 AEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTEDQIQQEVTSCIKMVYDTYNTFGFEN 416

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I VKLSTRPEKRVGSD +WD +E  +K  LD +       I   +  GEGAFYGPK E+ 
Sbjct: 417 IAVKLSTRPEKRVGSDEIWDKSEEALKHSLDAMG------IAYEIQEGEGAFYGPKIEFT 470

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D + R WQCGT+Q+DFNLPSR  A YV   +E+  PVMIHRA+ GS+ERFIGI+IE +
Sbjct: 471 LYDCLDRAWQCGTVQLDFNLPSRLGATYVGESNERLVPVMIHRAILGSLERFIGILIEEY 530

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P QA+V  IT    +YAQE+   L+   +  + D RNE I +KIREH++K+
Sbjct: 531 AGFFPTWLAPEQAVVVNITDKQADYAQEVVQKLQKCGIRAKADLRNEKIGFKIREHTLKR 590

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P +++CGD+E     I +R        K  L D I  +  E
Sbjct: 591 VPYMLVCGDQEMEAGEIAVRTRKGKDLGKFKLDDFITHIQAE 632


>gi|283785057|ref|YP_003364922.1| threonyl-tRNA synthetase [Citrobacter rodentium ICC168]
 gi|282948511|emb|CBG88100.1| threonyl-tRNA synthetase [Citrobacter rodentium ICC168]
          Length = 642

 Score =  681 bits (1758), Expect = 0.0,   Method: Composition-based stats.
 Identities = 299/655 (45%), Positives = 434/655 (66%), Gaps = 19/655 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D SD +  + ++
Sbjct: 1   MPV---ITLPDGSQRHYDHAVSPMDVALDIGPGLAKATIAGRVNGELVDASDLIENDATL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L +IRHSCAH++  A++ +WP  ++AIGP++++GFYYD D ++  + +++
Sbjct: 58  SIITAKDEEGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVVDNGFYYDVDLDRTLTQEDV 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M E+  ++   +K+ +S  +ARE F  + E YKV IL E+I   +   LY   E
Sbjct: 118 DALEKRMHELAEKNYDVIKKKVSWHEARETFVKRGEPYKVSILDENIAHDDQPGLYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KLMK AGAYWRGDS+  ML RIYGTAW  ++ L  YL  L
Sbjct: 178 YIDMCRGPHVPNMRFCHHF-KLMKTAGAYWRGDSDNKMLQRIYGTAWADKKALNAYLQRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF+ L  ++R K+K+  Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW+++GHW++Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 297 FMMDRVLWEKTGHWENYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  
Sbjct: 351 LPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQIRDEVNACIRMVYDMYST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI+VKLSTRPEKR+GSD +WD AE  +   L+      ++ I     LGEGAFYGP
Sbjct: 411 FGFEKIVVKLSTRPEKRIGSDEMWDRAEADLAVALE------ENNIPFEYQLGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF+LPSR +A YV   +E+  PVMIHRA+ GS+ERFIGI
Sbjct: 465 KIEFTLYDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E F G  P WL+P+Q +V  IT S  EY  E+   L++  + ++ D RNE I +KIRE
Sbjct: 525 LTEEFAGFFPTWLAPVQVVVMNITDSQSEYVNELTQKLQNAGIRVKADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           H+++++P +++CGDKE     + +R         + + + I  L +E      Q+
Sbjct: 585 HTLRRVPYMLVCGDKEVEAGKVAVRTRRGKDLGSLDVNEVIEKLQQEIRSRSLQQ 639


>gi|167855812|ref|ZP_02478565.1| leucyl-tRNA synthetase [Haemophilus parasuis 29755]
 gi|167853091|gb|EDS24352.1| leucyl-tRNA synthetase [Haemophilus parasuis 29755]
          Length = 643

 Score =  681 bits (1758), Expect = 0.0,   Method: Composition-based stats.
 Identities = 290/648 (44%), Positives = 425/648 (65%), Gaps = 16/648 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS + F    +  +VA+SI   LAK  +A  +NG+  D SD +  + ++EIIT +
Sbjct: 4   ITLPDGSQRQFDNPVSVMEVAQSIGAGLAKATIAGRVNGERRDASDIISEDATLEIITTK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHS AH++  A++ ++P V++AIGP I++GFYYD D ++  + ++L  +E +
Sbjct: 64  DEDGLEIIRHSTAHLLGHAIKQLFPNVKMAIGPTIDNGFYYDIDLDRSLTQEDLDALEAR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K+ +S ++AR+ FES+ E+YK+ IL E+I       LY   E+ D+CR
Sbjct: 124 MLELAKTNYDVVKKRVSWQEARDTFESRGESYKMAILDENISKDYRPALYHHEEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +      F KL KVAGAYWRGDS   ML RIYGTAW  +++L  YL+ LEE+ KR
Sbjct: 184 GPHVPNMRFCHHF-KLQKVAGAYWRGDSKNKMLQRIYGTAWADKKQLADYLHRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQH 303
           DHRK+ + +DL+H+ E+  G++FWH  GW IF+ L +++R K+ + DY+E+  P ++D+ 
Sbjct: 243 DHRKIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW +Y   MF       T  + R +A+KPMNCPGH+ +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWQNYGDLMFT------TQSENREYAIKPMNCPGHIQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FC  EQ+ +E      ++  IY  FGFE I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCMPEQVESEVTSCIKMVYDIYSTFGFENI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRP   +G+D +W+ AE  +   L        + +   +  GEGAFYGPK E+ L
Sbjct: 417 QVKLSTRPANSIGTDEMWNKAEADLAAALTA------NGLAFEIQEGEGAFYGPKIEFAL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D + R+WQCGTIQ+DF LP R +A YV   + +  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 RDCLDREWQCGTIQLDFFLPERLSASYVAEDNNRKTPVMIHRAILGSIERFIGIITEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+QA+V  IT S  EY Q++   L    L ++ D RNE + +K+REH+++++
Sbjct: 531 GFFPAWLAPVQAVVMNITDSQAEYVQQVVKQLSDAGLRVKADLRNEKVGFKVREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           P +++CGDKE +E  + +R           + + + +L K+    + +
Sbjct: 591 PYMLVCGDKEIAEGKVSVRTRKGADLGTYKVEEFVEMLKKQVRGRELK 638


>gi|260425980|ref|ZP_05779959.1| threonyl-tRNA synthetase [Citreicella sp. SE45]
 gi|260420472|gb|EEX13723.1| threonyl-tRNA synthetase [Citreicella sp. SE45]
          Length = 649

 Score =  681 bits (1757), Expect = 0.0,   Method: Composition-based stats.
 Identities = 331/653 (50%), Positives = 439/653 (67%), Gaps = 10/653 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEI 61
           + I LTFPDG++++F    T ++VA SIS+SL+KKA++  +NG+  DL  P+ E   I I
Sbjct: 2   AQISLTFPDGNVRDFDSGVTPAEVAASISKSLSKKAISAQVNGQHWDLQWPIDESAEIAI 61

Query: 62  ITP-EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            T  +D  +L +IRH  AH+MA AVQ IWP  +V IGP+ E+G++YDFD+ +PF+ ++L 
Sbjct: 62  NTLQDDAPALELIRHDLAHVMARAVQEIWPATKVTIGPVTENGWFYDFDRAEPFTPEDLG 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IE KM+EII        +     +AR  +E + E YKVE+++ IP   ++ +Y  GEW 
Sbjct: 122 AIEAKMKEIINARDAVRTEIWDRARARAFYEERGEGYKVELVDRIPEGADIRMYWHGEWQ 181

Query: 181 DLCRGPHVRSTGQ-VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           DLCRGPH++STGQ     FKLM V+GAYW GD NRPML RI G A+  + +L +YL FLE
Sbjct: 182 DLCRGPHLQSTGQLPADAFKLMGVSGAYWFGDVNRPMLQRIQGVAFRNRDDLKKYLNFLE 241

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+ KRDHRKL REMDLFH+  +  G IFWH  GW ++ +L  YMRR + KD Y E+NTPQ
Sbjct: 242 EAAKRDHRKLGREMDLFHLQPEAPGQIFWHPNGWTVYTSLQDYMRRMQRKDGYVEVNTPQ 301

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+++ LW++SGHW++YR NMF V+  ++  ++    ALKPMNCP HV +FNHGLKSYR+L
Sbjct: 302 VVNRKLWEESGHWENYRENMFIVEVDEEGAREKTINALKPMNCPCHVQIFNHGLKSYRDL 361

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFGS  R EPSG+LHG+MRVRGFTQDDAH+FCT +Q+  E  K  + +  IY D 
Sbjct: 362 PLRMAEFGSCNRYEPSGALHGIMRVRGFTQDDAHIFCTFDQIEEESKKFIDFLAKIYADL 421

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+   VKLSTRPEKRVGS+  WD  E  +                  +  GEGAFY PK
Sbjct: 422 GFDSWRVKLSTRPEKRVGSEESWDSMEEALANACKAAGR------EFEIFPGEGAFYAPK 475

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E++L DAIGRDWQCGT+Q+D NLP R +A YV    EK  P+M+HRAV GS ERFIGI+
Sbjct: 476 LEFVLTDAIGRDWQCGTLQLDPNLPERLDANYVGQDGEKHRPIMLHRAVLGSFERFIGIL 535

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE   G LP WL+P Q +V +ITS A +Y  E    L++  +  E D RNE INYK+REH
Sbjct: 536 IEEHSGKLPFWLAPRQVVVASITSEADDYVHEAVAALRAAGVRAEADVRNEKINYKVREH 595

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           S+ K+P+I+  G +E  ER++ +RR G   TQ  SL +    L  E+ PPD +
Sbjct: 596 SLGKVPVILAVGHREVEERTVTVRRLGEKQTQVRSLDEIAAELGTEATPPDLR 648


>gi|295399484|ref|ZP_06809466.1| threonyl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93]
 gi|312109958|ref|YP_003988274.1| threonyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
 gi|294978950|gb|EFG54546.1| threonyl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93]
 gi|311215059|gb|ADP73663.1| threonyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
          Length = 644

 Score =  681 bits (1757), Expect = 0.0,   Method: Composition-based stats.
 Identities = 256/652 (39%), Positives = 415/652 (63%), Gaps = 20/652 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M   I++TFPDG++K FP   T   +A SIS  L KKA+A  +N ++ DL  P+  +GSI
Sbjct: 1   MAEMIRITFPDGAVKEFPKGTTTEQIAASISPGLKKKAIAGKLNDRLVDLRTPIQEDGSI 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT + P +L ++RHS AH+MA+A++ ++  V++ +GP+IE+GFYYD D E+  + ++L
Sbjct: 61  SIITQDMPEALDILRHSTAHLMAQAIKRLYKNVKLGVGPVIENGFYYDIDMEESLTPEDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IE++M++I+  +   +++ +S E+A  L+E   +  K+E++  IP  E +++Y QGE+
Sbjct: 121 PKIEQEMRKIVKENLEIVRKEVSREEAIRLYEEIGDNLKLELINDIPEGETISIYEQGEF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRG HV STG++K+F KL+ ++GAYWRGDSN  ML RIYGTA+  +++L +YL  L+
Sbjct: 181 FDLCRGVHVPSTGKIKEF-KLLNISGAYWRGDSNNKMLQRIYGTAFFKKEDLDEYLRQLQ 239

Query: 240 ESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           E+++RDHRKL +E++LF  ++    G+  W  KG  + + +  Y+  K  +  Y+ + TP
Sbjct: 240 EAKERDHRKLGKELELFMTSQKVGQGLPLWLPKGATVRRIIERYIVDKEIELGYQHVYTP 299

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    L++ SGHWD Y+ NMF     D+         L+PMNCP H+ ++ + + SYRE
Sbjct: 300 VLGSVELYKTSGHWDHYKENMFPPMEMDN-----EQLVLRPMNCPHHMMIYKNKIHSYRE 354

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+ +E  ++ NLI+ +YKD
Sbjct: 355 LPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKDEFKRVVNLILEVYKD 414

Query: 418 FGFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           FG ++   +LS R           D +W+ A+++++  +D +       +      GE A
Sbjct: 415 FGLDEYSFRLSYRDPHDKEKYYDDDEMWEKAQSMLREAMDELG------LEYYEAEGEAA 468

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  ++ A+G+D    T+Q+DF LP RF+  Y+    +   PV+IHR V  ++ER
Sbjct: 469 FYGPKLDVQVRTALGKDETLSTVQLDFLLPERFDLTYIGEDGKPHRPVVIHRGVVSTMER 528

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETIN 592
           F+  +IE +KG  P WL+P+Q  V  ++    ++YA ++   L+S    +E D R+E I 
Sbjct: 529 FVAFLIEEYKGAFPTWLAPVQVEVIPVSPEAHLDYAYKVKETLQSQGFRVEVDGRDEKIG 588

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           YKIRE  I+KIP +++ GDKE +E ++ +R++G   ++ ++L D I  L  E
Sbjct: 589 YKIREAQIQKIPYMLVVGDKEMAENAVNVRKYGEQKSETMALADFIAALKAE 640


>gi|325982725|ref|YP_004295127.1| threonyl-tRNA synthetase [Nitrosomonas sp. AL212]
 gi|325532244|gb|ADZ26965.1| threonyl-tRNA synthetase [Nitrosomonas sp. AL212]
          Length = 635

 Score =  681 bits (1757), Expect = 0.0,   Method: Composition-based stats.
 Identities = 320/640 (50%), Positives = 443/640 (69%), Gaps = 15/640 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPE 65
           +  PDGS + F    +  +VA +I   L + A+A  ING++ DLS  V + S + IIT +
Sbjct: 4   VRLPDGSERIFEHPVSVMEVAMAIGSGLGRAAIAGKINGQLVDLSYLVEDDSDLAIITEK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++A AV+ ++PE QV IGP+I+DGFYYDF  ++ F+ ++L  IEK+
Sbjct: 64  DDEGLEIIRHSCAHLLAHAVKELFPEAQVTIGPVIDDGFYYDFSYKRSFTFEDLTAIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M EI  RD    ++ L   KA + F+ + E YK +I+ESIP  E+++LY QG++ DLCRG
Sbjct: 124 MIEISKRDLKIDRKILERAKAIDFFKKQGEFYKAQIIESIPGDEDLSLYSQGDFTDLCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +T ++K F KLMKVAGAYWRGDSN  ML RIYGTAW ++ +   YL+ LEE+EKRD
Sbjct: 184 PHVPATSKIKVF-KLMKVAGAYWRGDSNNEMLQRIYGTAWASKDDQKNYLHRLEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHL 304
           HRK+ ++++LFH+ ++ SG++FWH KGW ++Q +  YMR  +  + Y EI TPQ+LD+ L
Sbjct: 243 HRKIGKQLNLFHMQDEASGMVFWHPKGWTLWQQIEQYMRNILSHNGYHEIRTPQILDKDL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W +SGHW+++R NMF       T  D R FA+KPMNCPGHV +FN GL+SYRELP+R AE
Sbjct: 303 WVRSGHWENFRENMFI------THSDERDFAIKPMNCPGHVQIFNQGLRSYRELPIRFAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNE SG+LHG+MRVR FTQDDAH+FCT++Q+  E ++  +L+  +Y DFGF +I+
Sbjct: 357 FGSCHRNEASGALHGIMRVRAFTQDDAHIFCTEDQIQQEVVEFIDLLKIVYADFGFREIL 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +KLSTRP KRVGS+A WD +E  ++  L+ +K      +      GEGAFYGPK E+ LK
Sbjct: 417 IKLSTRPLKRVGSEAQWDKSEAALEAALNEVK------LEWERQPGEGAFYGPKIEFSLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D IGR WQCGT+Q+DF++P R  A YV   + +  PVM+HRA+ GS+ERFIGI+IEN+ G
Sbjct: 471 DCIGRLWQCGTLQLDFSMPDRLGAEYVAEDNSRQVPVMLHRAILGSLERFIGILIENYAG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
            LPLWLSP Q +V  I+ + ++YAQ++   LK + +    D RNE I YKIREHS++K+P
Sbjct: 531 ALPLWLSPEQVVVLNISRTQIDYAQKVVAQLKENGVRASLDLRNEKITYKIREHSLQKLP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
             II GD+E     I +R        ++ L D +    +E
Sbjct: 591 YQIIVGDEEVRANKIAVRNRVGENLGQMKLPDFLVRFNEE 630


>gi|282599730|ref|ZP_05971662.2| threonine--tRNA ligase [Providencia rustigianii DSM 4541]
 gi|282568410|gb|EFB73945.1| threonine--tRNA ligase [Providencia rustigianii DSM 4541]
          Length = 653

 Score =  681 bits (1757), Expect = 0.0,   Method: Composition-based stats.
 Identities = 298/647 (46%), Positives = 426/647 (65%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS + F    +  DVA  I   LAK  +A  ++G++ D  + +  +  +
Sbjct: 12  MPV---ITLPDGSQRQFDHAVSVMDVARDIGTGLAKACIAGRVDGELVDACELIEHDAKL 68

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L +IRHSCAH++  A++ +WP  ++AIGP+I++GFYYD D +   + ++L
Sbjct: 69  SIITSKDDEGLEIIRHSCAHLLGHAIKQLWPNTKMAIGPVIDNGFYYDVDLDYTLTQEDL 128

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE-SIPAKENVTLYRQGE 178
            ++EK+M E+   D   +K+ +S  +ARE F  + E YKVEIL+ +I   +   LY   E
Sbjct: 129 DKLEKRMLELAKTDYDVVKKRVSWAEARETFVGRGEDYKVEILDQNISQDDRPGLYHHQE 188

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KL KVAGAYWRG+S+  ML RIYGTAW  +++L  YL  L
Sbjct: 189 YIDMCRGPHVPNMRFCHHF-KLQKVAGAYWRGNSDNKMLQRIYGTAWADKKQLAAYLLRL 247

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G+ FWH  GW IF+ L +++R K+K  +Y+E+  P
Sbjct: 248 EEAAKRDHRKIGKQLDLYHMQEEAPGMAFWHNDGWTIFRELETFVRTKLKSYNYQEVKGP 307

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW+++GHW++Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 308 FMMDRVLWERTGHWENYKDAMFT------TSSENREYCVKPMNCPGHVQIFNQGLKSYRD 361

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT++Q+ +E      +I  +Y  
Sbjct: 362 LPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEDQILSEVTSCIEMIYDVYST 421

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI+VKLSTRPEKR+G+D +WD AE  +   L +        I      GEGAFYGP
Sbjct: 422 FGFEKIVVKLSTRPEKRIGTDDMWDTAEADLANALKS------KGIEFEYQPGEGAFYGP 475

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF LP R NA YV  ++E+  PVMIHRAV GS+ERFIGI
Sbjct: 476 KIEFTLYDCLDRAWQCGTVQLDFFLPGRLNASYVGENNERITPVMIHRAVLGSLERFIGI 535

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E + G  P WL+P Q +V  IT +  EY QE+ N L+S  +  + D RNE I +KIRE
Sbjct: 536 LTEEYAGFFPTWLAPQQVVVMNITDTQAEYVQELVNKLQSVGIRAKADLRNEKIGFKIRE 595

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H+++++P +++CGDKE     + +R         + + + +  L KE
Sbjct: 596 HTLRRVPYMLVCGDKEVESGKVSVRTRRGKDLGSLDVDEFMTKLLKE 642


>gi|56749447|sp|Q7MK65|SYT_VIBVY RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
          Length = 642

 Score =  681 bits (1757), Expect = 0.0,   Method: Composition-based stats.
 Identities = 291/642 (45%), Positives = 426/642 (66%), Gaps = 17/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  DVA SI   LAK  +A  +NG+  D  D +  + S+EIIT +
Sbjct: 4   ITLPDGSQRQFDNSVSTMDVALSIGPGLAKATIAGRVNGQRVDACDLIEEDASLEIITTK 63

Query: 66  DP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  A++ ++P  ++AIGP I++GFYYD D E+  + ++L +IE 
Sbjct: 64  DEVDGLEIVRHSCAHLLGHALKQLYPNAKMAIGPTIDNGFYYDIDLEESLTQEDLEKIEA 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLC 183
           +M+ +       +K+ +S ++AR+ FE++ E YK+EIL E++   +   LY   E+ D+C
Sbjct: 124 RMKALAKTKYQVIKKKVSWQEARDAFEARGETYKMEILDENVSRDDRPGLYHHEEYIDMC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +    + F  L  VAGAYWRG+S+  ML RIYGTA++ ++ L  +L  LEE+ K
Sbjct: 184 RGPHVPNMSFCQHFTLL-NVAGAYWRGNSDNKMLQRIYGTAFHDKKALKDHLTRLEEAAK 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRK+ +++DLFH+ ++  G++FWH  GW +F+ L  ++R K+ +  Y+E+  P ++D+
Sbjct: 243 RDHRKIGKQLDLFHMQQEAPGMVFWHHNGWSVFRDLEVFIREKLTEYGYQEVKGPLMMDR 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+
Sbjct: 303 VLWERSGHWDKYADAMFT------TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRM 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHG+MRVRGFTQDDAH+FCT+ Q+ +E      ++   Y+ FGF+ 
Sbjct: 357 AEFGSCHRNEPSGALHGIMRVRGFTQDDAHIFCTESQIQDEVTNCIKMVYDTYQTFGFDN 416

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I VKLSTRPE+RVGSD +WD +E  +K  L+++       I   +  GEGAFYGPK E+ 
Sbjct: 417 IAVKLSTRPEQRVGSDEIWDQSEEALKQALESM------DIAYEIQEGEGAFYGPKIEFT 470

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D +GR WQCGT+Q+DFNLP+R  A YV  ++E+  PVMIHRA+ GS+ERFIGI+IE +
Sbjct: 471 LFDCLGRAWQCGTVQLDFNLPNRLGATYVGENNERLVPVMIHRAILGSLERFIGILIEEY 530

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P QA++  IT    +Y QEIA  L+   +  + D RNE I +KIREH++K+
Sbjct: 531 AGFFPTWLAPEQAVIMNITDKQADYVQEIAQKLQKCGIRAKADLRNEKIGFKIREHTLKR 590

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P +++CGD+E     I +R        K  + D +  +  +
Sbjct: 591 VPFMLVCGDQEMEAGEIAVRTRKGNDLGKFKVDDFVSYIQDQ 632


>gi|307310711|ref|ZP_07590357.1| threonyl-tRNA synthetase [Escherichia coli W]
 gi|331647210|ref|ZP_08348304.1| threonine--tRNA ligase [Escherichia coli M605]
 gi|331673269|ref|ZP_08374037.1| threonine--tRNA ligase [Escherichia coli TA280]
 gi|281178789|dbj|BAI55119.1| threonyl-tRNA synthetase [Escherichia coli SE15]
 gi|306908889|gb|EFN39385.1| threonyl-tRNA synthetase [Escherichia coli W]
 gi|315061024|gb|ADT75351.1| threonyl-tRNA synthetase [Escherichia coli W]
 gi|315299748|gb|EFU58988.1| threonyl-tRNA synthetase [Escherichia coli MS 16-3]
 gi|323378405|gb|ADX50673.1| threonyl-tRNA synthetase [Escherichia coli KO11]
 gi|330911523|gb|EGH40033.1| threonyl-tRNA synthetase [Escherichia coli AA86]
 gi|331043993|gb|EGI16129.1| threonine--tRNA ligase [Escherichia coli M605]
 gi|331069467|gb|EGI40854.1| threonine--tRNA ligase [Escherichia coli TA280]
 gi|332343438|gb|AEE56772.1| threonyl-tRNA synthetase ThrS [Escherichia coli UMNK88]
          Length = 642

 Score =  681 bits (1757), Expect = 0.0,   Method: Composition-based stats.
 Identities = 300/655 (45%), Positives = 433/655 (66%), Gaps = 19/655 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D  D +  +  +
Sbjct: 1   MPV---ITLPDGSQRHYDHAVSPMDVALDIGPGLAKACIAGRVNGELVDACDLIENDAQL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L +IRHSCAH++  A++ +WP  ++AIGP+I++GFYYD D ++  + +++
Sbjct: 58  SIITAKDEEGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVIDNGFYYDVDLDRTLTQEDV 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M E+  ++   +K+ +S  +ARE F ++ E+YKV IL E+I   +   LY   E
Sbjct: 118 EALEKRMHELAEKNYDVIKKKVSWHEARETFANRGESYKVSILDENIAHDDKPGLYFHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KLMK AGAYWRGDSN  ML RIYGTAW  ++ L  YL  L
Sbjct: 178 YVDMCRGPHVPNMRFCHHF-KLMKTAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF+ L  ++R K+K+  Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW+++GHWD+Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 297 FMMDRVLWEKTGHWDNYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+ +E      L+  +Y  
Sbjct: 351 LPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI+VKLSTRPEKR+GSD +WD AE  +   L+      ++ I     LGEGAFYGP
Sbjct: 411 FGFEKIVVKLSTRPEKRIGSDEMWDRAEADLAVALE------ENNIPFEYQLGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF+LPSR +A YV   +E+  PVMIHRA+ GS+ERFIGI
Sbjct: 465 KIEFTLYDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E F G  P WL+P+Q ++  IT S  +Y  E+   L +  + ++ D RNE I +KIRE
Sbjct: 525 LTEEFAGFFPTWLAPVQVVIMNITDSQSDYVNELTQKLSNAGIRVKADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           H+++++P +++CGDKE     + +R         + + + I  L +E      ++
Sbjct: 585 HTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSMDVNEVIEKLQQEIRSRSLKQ 639


>gi|71282219|ref|YP_269610.1| threonyl-tRNA synthetase [Colwellia psychrerythraea 34H]
 gi|123747383|sp|Q480A9|SYT_COLP3 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|71147959|gb|AAZ28432.1| threonyl-tRNA synthetase [Colwellia psychrerythraea 34H]
          Length = 636

 Score =  681 bits (1757), Expect = 0.0,   Method: Composition-based stats.
 Identities = 302/647 (46%), Positives = 416/647 (64%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP    +T PDGS ++F    +  DVA  I   LAK  +A  I+G + D  + + ++ S+
Sbjct: 1   MPV---ITLPDGSQRSFEQAVSVMDVALDIGPGLAKATIAGRIDGNLVDACELITQDASL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           ++IT +D   L +IRHSCAH++  A++ ++P V++AIGP IE+GFYYD D ++  S D+L
Sbjct: 58  QLITSKDSEGLEIIRHSCAHLLGHAIKQLYPNVKMAIGPTIENGFYYDIDLDESISEDDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
            ++EK+M E+       +K+  S + A + F  + E YK+ IL E+I   +   LY   E
Sbjct: 118 VKLEKRMTELARTGYEVVKKTGSWQDAYDAFTERGETYKLAILDENIEKTDTPALYHHQE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV S      F KLMKVAGAYWRGDS+  ML RIYGTAW  +++L  Y+  L
Sbjct: 178 YIDMCRGPHVPSMRHCHHF-KLMKVAGAYWRGDSDNKMLQRIYGTAWADKKQLKAYIVRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
            E+EKRDHRK+ + +DLFH  E+  G++FWH  GW I+  L  ++R K+ + DY+E+  P
Sbjct: 237 AEAEKRDHRKIGKTLDLFHWQEEAPGMVFWHNDGWTIYTELEKFIREKLHEYDYDEVKAP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+
Sbjct: 297 MMMDRSLWEKSGHWDKYADGMFT------TTSEKREYAIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFG  +RNEPSGSLHGLMRVRGFTQDDAH+FC + Q+  E  K   ++  +Y  
Sbjct: 351 LPLRIAEFGCCHRNEPSGSLHGLMRVRGFTQDDAHIFCMESQVQAEVKKCIEMVYDVYGS 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFE ++VKLSTRP+ R+GSD +WD AE  +   L      +   I    L GEGAFYGP
Sbjct: 411 FGFEDVVVKLSTRPDNRIGSDEIWDKAEAGLAQAL------TDSNIAFEYLPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D +GR WQCGT+Q+DF LP R  A YV   +E+  PVMIHRA+ GS+ERFIGI
Sbjct: 465 KIEFTLMDCLGRAWQCGTVQLDFALPERLGATYVGEDNERYTPVMIHRAILGSLERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE F G  P WLSPIQ  +  IT     Y +++   LK +    + D RNE I +KIRE
Sbjct: 525 LIEEFTGKFPTWLSPIQTTIMNITDKQAPYCEKVVKKLKENGFRAKIDLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H++K++P +++ GDKE     I +R        K+S+ D I  L+ E
Sbjct: 585 HTLKRVPYLLVVGDKEMESGEISVRTRSGEDLGKMSVDDFIAKLSDE 631


>gi|323968488|gb|EGB63894.1| threonyl-tRNA synthetase [Escherichia coli M863]
          Length = 642

 Score =  681 bits (1757), Expect = 0.0,   Method: Composition-based stats.
 Identities = 301/655 (45%), Positives = 434/655 (66%), Gaps = 19/655 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D  D +  +  +
Sbjct: 1   MPV---ITLPDGSQRHYDHAVSPMDVALDIGPGLAKACIAGRVNGELVDACDLIENDAQL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L +IRHSCAH++  A++ +WP  ++AIGP+I++GFYYD D ++  + +++
Sbjct: 58  SIITAKDEEGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVIDNGFYYDVDLDRTLTQEDV 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M E+  ++   +K+ +S  +ARE F ++ E+YKV IL E+I   +   LY   E
Sbjct: 118 EALEKRMHELAEKNYDVIKKKVSWHEARETFANRGESYKVSILDENIAHDDKPGLYFHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KLMK AGAYWRGDSN  ML RIYGTAW  ++ L  YL  L
Sbjct: 178 YVDMCRGPHVPNMRFCHHF-KLMKTAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF+ L  ++R K+K+  Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW+++GHWD+Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 297 FMMDRVLWEKTGHWDNYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+ +E      L+  +Y  
Sbjct: 351 LPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI+VKLSTRPEKR+GSD +WD AE  +   L+      ++ I     LGEGAFYGP
Sbjct: 411 FGFEKIVVKLSTRPEKRIGSDEMWDRAEADLAVALE------ENNIPFEYQLGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF+LPSR +A YV   +E+  PVMIHRA+ GS+ERFIGI
Sbjct: 465 KIEFTLYDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E F G  P+WL+P+Q ++  IT S  EY  E+   L +  + ++ D RNE I +KIRE
Sbjct: 525 LTEEFAGFFPIWLAPVQVVIMNITDSQSEYVNELTQKLSNAGIRVKADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           H+++++P +++CGDKE     + +R         + + + I  L +E      ++
Sbjct: 585 HTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSMDVNEVIEKLQQEIRSRSLKQ 639


>gi|15602458|ref|NP_245530.1| threonyl-tRNA synthetase [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|13431883|sp|P57857|SYT_PASMU RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|12720863|gb|AAK02677.1| ThrS [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 643

 Score =  681 bits (1756), Expect = 0.0,   Method: Composition-based stats.
 Identities = 303/648 (46%), Positives = 433/648 (66%), Gaps = 16/648 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPE 65
           +T PDGS + F    +  DVA SI   LAK  +A  +NG+  D  D + E S +EIIT +
Sbjct: 4   ITLPDGSQRQFEQPISVMDVAASIGAGLAKACIAGRVNGERKDACDLITEDSKLEIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           +   L +IRHSCAH++  A++ ++P V++AIGP I+ GFYYD D ++  + ++L  +EK+
Sbjct: 64  EEDGLEIIRHSCAHLLGHAIKQLFPNVKMAIGPTIDKGFYYDVDLDRSLTQEDLDALEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K+ +S ++AR+ FE++ E YK+ IL E+I   +   LY   E+ D+CR
Sbjct: 124 MLELAKTNYDVVKKVVSWQEARDTFEARGEPYKMAILDENIDRCDTPALYHHEEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +      F KLMKVAGAYWRGDS   ML RIYGTAW  +++L++YL  LEE+ KR
Sbjct: 184 GPHVPNMRFCHHF-KLMKVAGAYWRGDSKNKMLQRIYGTAWADKKQLSEYLTRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ + +DL+H+ E+  G++FWH  GW IF+ L +++R K+K+ DY+E+  P ++D+ 
Sbjct: 243 DHRKIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW +Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWQNYGDLMFT------TQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+ +E      ++  IY  FGFE I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQIESEVTACIKMVYDIYSTFGFENI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPEKR+G+D +WD AE  +   L      S + +   +  GEGAFYGPK E+ L
Sbjct: 417 QVKLSTRPEKRIGADEMWDRAEAGLAAAL------SHNGLEYEIQEGEGAFYGPKIEFAL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D + R+WQCGTIQ+DF LP R NA YV   +++  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 RDCLDREWQCGTIQLDFALPGRLNASYVAEDNDRRTPVMIHRAILGSIERFIGIITEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P QAIV  IT S  +Y Q++   L    L +++D RNE I +KIREH+++++
Sbjct: 531 GFFPAWLAPTQAIVMNITDSQSDYVQKVVKTLSDAGLRVKSDLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           P +++CGDKE     + +R          ++ + + IL K+    + +
Sbjct: 591 PYMLVCGDKEIEAGKVAVRTRKGADLGTFTIEEFLDILKKQVRSRELK 638


>gi|224584156|ref|YP_002637954.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|254783535|sp|C0Q647|SYT_SALPC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|224468683|gb|ACN46513.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
          Length = 642

 Score =  681 bits (1756), Expect = 0.0,   Method: Composition-based stats.
 Identities = 299/655 (45%), Positives = 431/655 (65%), Gaps = 19/655 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D  D +  + ++
Sbjct: 1   MPV---ITLPDGSQRHYDHPVSPMDVALDIGPGLAKATIAGRVNGELVDACDLIENDATL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L +IRHSCAH++  A++ +WP  ++AIGP++++GFYYD D ++  + +++
Sbjct: 58  AIITAKDEEGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVVDNGFYYDVDLDRTLTQEDV 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M E+  ++   +K+ +S   ARE F  + E YKV IL E+I   +   LY   E
Sbjct: 118 EALEKRMHELAEKNYDVIKKKVSWHDARETFVKRGETYKVAILDENIAHDDKPGLYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KLMK AGAYWRGDSN  ML RIYGTAW  ++ L  YL  L
Sbjct: 178 YVDMCRGPHVPNMRFCHHF-KLMKTAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF+ L  ++R K+K+  Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW+++GHWD+Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 297 FMMDRVLWEKTGHWDNYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  
Sbjct: 351 LPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQIRDEVNACIRMVYDMYSP 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI+VKLSTRP+KR+GSD +WD AE  +   L+      ++ I     LGEGAFYGP
Sbjct: 411 FGFEKIVVKLSTRPDKRIGSDEMWDRAEADLAVALE------ENNIPFEYQLGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF+LPSR +A YV   +E+  PVMIHRA+ GS+ERFIGI
Sbjct: 465 KIEFTLYDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E F G  P WL+P+Q +V  IT S   Y  E+   L++  + ++ D RNE I +KIRE
Sbjct: 525 LTEEFAGFFPTWLAPVQVVVMNITDSQSGYVNELTQKLQNAGIRVKADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           H+++++P +++CGDKE     + +R         + + D I  L +E      Q+
Sbjct: 585 HTLRRVPYMLVCGDKEVEAGKVAVRTRRGKDLGSLDVNDVIEKLQQEIRSRSLQQ 639


>gi|145634324|ref|ZP_01790034.1| threonyl-tRNA synthetase [Haemophilus influenzae PittAA]
 gi|145268304|gb|EDK08298.1| threonyl-tRNA synthetase [Haemophilus influenzae PittAA]
          Length = 643

 Score =  681 bits (1756), Expect = 0.0,   Method: Composition-based stats.
 Identities = 297/648 (45%), Positives = 431/648 (66%), Gaps = 16/648 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS + F   A+  +VA+ I   LAK  +A  +NG+  D  D + ++ ++EIIT +
Sbjct: 4   ITLPDGSQRQFDHPASVLEVAQDIGAGLAKATIAGRVNGERRDACDVIDQDATLEIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ ++P+V++AIGP IE+GFYYD D ++  + ++L  IEK+
Sbjct: 64  DEDGLEIIRHSCAHLLGHAIKQLFPDVKMAIGPTIENGFYYDVDLDRSLTQEDLDAIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K+ ++ ++AR+ FE + E YK+ IL E+I       LY   E+ D+CR
Sbjct: 124 MLELAKTNYDVVKKRVTWQEARDTFEKRGEPYKMAILDENIERTATPALYHHLEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +    + F KL KVAGAYWRGDS   ML RIYGTAW  +++L +YL  LEE+ KR
Sbjct: 184 GPHVPNMRFCQHF-KLQKVAGAYWRGDSKNKMLQRIYGTAWADKKQLAEYLTRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQH 303
           DHRK+ + +DL+H+ E+  G++FWH  GW IF+ L +++R K+ + DY+E+  P ++D+ 
Sbjct: 243 DHRKIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW +Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWQNYADLMFT------TQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+ +E      ++  IY  FGF  I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQIESEVTSCIKMVYDIYSTFGFTNI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPE R+GSD +WD AE  +   L        + +   +  GEGAFYGPK E+ L
Sbjct: 417 AVKLSTRPENRIGSDEMWDRAEAGLAAAL------VHNGLEYEIQEGEGAFYGPKIEFAL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D +GR+WQCGT+Q+DF LP R +A YV   + +  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 RDCLGREWQCGTVQLDFALPGRLDATYVAEDNSRKTPVMIHRAILGSIERFIGIITEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P QA+V  IT S  +Y Q++A  L    L ++TD RNE + +KIREH+++++
Sbjct: 531 GFFPAWLAPTQAVVMNITDSQADYVQKVAKQLSDVGLRVKTDLRNEKVGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           P +++CGDKE +E  + +R          ++ +   IL  +    + +
Sbjct: 591 PYMLVCGDKEIAEGKVAVRTRKGADLGTFTVEEFAEILKNQVRSRELK 638


>gi|52425108|ref|YP_088245.1| threonyl-tRNA synthetase [Mannheimia succiniciproducens MBEL55E]
 gi|73919804|sp|Q65TQ0|SYT_MANSM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|52307160|gb|AAU37660.1| ThrS protein [Mannheimia succiniciproducens MBEL55E]
          Length = 643

 Score =  681 bits (1756), Expect = 0.0,   Method: Composition-based stats.
 Identities = 299/648 (46%), Positives = 433/648 (66%), Gaps = 16/648 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS + F    +  +VA+SI   LAK  +A  +NG+  D  D +  + ++EIIT +
Sbjct: 4   ITLPDGSQRQFDNPVSVLEVAQSIGAGLAKATIAGRVNGERRDACDMITEDSTLEIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ ++P+V++AIGP I++GFYYD D E   S ++L  +EK+
Sbjct: 64  DEDGLEIIRHSCAHLLGHAIKQLFPDVKMAIGPTIDNGFYYDVDLEHSLSQEDLDALEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K+ +S ++AR+ FE + E YK+ IL E+I   ++  LY   E+ D+CR
Sbjct: 124 MLELAKTNYDVVKRRVSWQEARDTFEKRGEPYKMAILDENIAKDDHPALYHHEEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +      F KL KVAGAYWRGDS   ML RIYGTAW  +++L +YL  LEE+ KR
Sbjct: 184 GPHVPNMRFCHHF-KLQKVAGAYWRGDSKNKMLQRIYGTAWADKKQLNEYLTRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ + +DL+H+ E+  G++FWH  GW IF+ L +++R K+K+ DY+E+  P ++D+ 
Sbjct: 243 DHRKIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW +Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWQNYGDLMFT------TQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+ +E      ++  IY  FGF  I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQIESEVTSCIRMVYDIYSTFGFTNI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPE R+G DA+WD AE  +   L      + + +   +  GEGAFYGPK E+ L
Sbjct: 417 AVKLSTRPENRIGDDAMWDRAEQGLANAL------AHNGLQYEIQEGEGAFYGPKIEFAL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D + R+WQCGT+Q+DF LP R NA YV   +++  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 RDCLDREWQCGTVQLDFALPGRLNASYVAEDNDRRTPVMIHRAILGSIERFIGIITEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+QA+V  IT S  EY Q++   L    L +++D RNE + +K+REH+++++
Sbjct: 531 GFFPSWLAPVQAVVMNITDSQAEYVQKVTKTLSDAGLRVKSDLRNEKVGFKVREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           P +++CGDKE SE  + +R          S+ + + IL  +    + +
Sbjct: 591 PYMLVCGDKEISEGKVSVRTRRGADLGTYSVEEFVEILKNQVRSRELK 638


>gi|16129675|ref|NP_416234.1| threonyl-tRNA synthetase [Escherichia coli str. K-12 substr.
           MG1655]
 gi|24112885|ref|NP_707395.1| threonyl-tRNA synthetase [Shigella flexneri 2a str. 301]
 gi|26247970|ref|NP_754010.1| threonyl-tRNA synthetase [Escherichia coli CFT073]
 gi|30063014|ref|NP_837185.1| threonyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|74311961|ref|YP_310380.1| threonyl-tRNA synthetase [Shigella sonnei Ss046]
 gi|89108559|ref|AP_002339.1| threonyl-tRNA synthetase [Escherichia coli str. K-12 substr. W3110]
 gi|91210933|ref|YP_540919.1| threonyl-tRNA synthetase [Escherichia coli UTI89]
 gi|110641840|ref|YP_669570.1| threonyl-tRNA synthetase [Escherichia coli 536]
 gi|110805471|ref|YP_688991.1| threonyl-tRNA synthetase [Shigella flexneri 5 str. 8401]
 gi|117623893|ref|YP_852806.1| threonyl-tRNA synthetase [Escherichia coli APEC O1]
 gi|170081377|ref|YP_001730697.1| threonyl-tRNA synthetase [Escherichia coli str. K-12 substr. DH10B]
 gi|170680212|ref|YP_001743530.1| threonyl-tRNA synthetase [Escherichia coli SMS-3-5]
 gi|188492265|ref|ZP_02999535.1| threonyl-tRNA synthetase [Escherichia coli 53638]
 gi|191171752|ref|ZP_03033299.1| threonyl-tRNA synthetase [Escherichia coli F11]
 gi|194435142|ref|ZP_03067376.1| threonyl-tRNA synthetase [Shigella dysenteriae 1012]
 gi|194438580|ref|ZP_03070669.1| threonyl-tRNA synthetase [Escherichia coli 101-1]
 gi|215486938|ref|YP_002329369.1| threonyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69]
 gi|218558588|ref|YP_002391501.1| threonyl-tRNA synthetase [Escherichia coli S88]
 gi|218689663|ref|YP_002397875.1| threonyl-tRNA synthetase [Escherichia coli ED1a]
 gi|218699714|ref|YP_002407343.1| threonyl-tRNA synthetase [Escherichia coli IAI39]
 gi|218705218|ref|YP_002412737.1| threonyl-tRNA synthetase [Escherichia coli UMN026]
 gi|237705668|ref|ZP_04536149.1| threonyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
 gi|238900934|ref|YP_002926730.1| threonyl-tRNA synthetase [Escherichia coli BW2952]
 gi|253773326|ref|YP_003036157.1| threonyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|254161779|ref|YP_003044887.1| threonyl-tRNA synthetase [Escherichia coli B str. REL606]
 gi|256022617|ref|ZP_05436482.1| threonyl-tRNA synthetase [Escherichia sp. 4_1_40B]
 gi|293405218|ref|ZP_06649210.1| threonyl-tRNA synthetase [Escherichia coli FVEC1412]
 gi|293410035|ref|ZP_06653611.1| threonyl-tRNA synthetase [Escherichia coli B354]
 gi|293415037|ref|ZP_06657680.1| threonyl-tRNA synthetase [Escherichia coli B185]
 gi|297517244|ref|ZP_06935630.1| threonyl-tRNA synthetase [Escherichia coli OP50]
 gi|298380861|ref|ZP_06990460.1| threonyl-tRNA synthetase [Escherichia coli FVEC1302]
 gi|300938947|ref|ZP_07153648.1| threonyl-tRNA synthetase [Escherichia coli MS 21-1]
 gi|300987614|ref|ZP_07178286.1| threonyl-tRNA synthetase [Escherichia coli MS 200-1]
 gi|300994418|ref|ZP_07180923.1| threonyl-tRNA synthetase [Escherichia coli MS 45-1]
 gi|301017728|ref|ZP_07182383.1| threonyl-tRNA synthetase [Escherichia coli MS 69-1]
 gi|301025270|ref|ZP_07188835.1| threonyl-tRNA synthetase [Escherichia coli MS 196-1]
 gi|306815028|ref|ZP_07449184.1| threonyl-tRNA synthetase [Escherichia coli NC101]
 gi|307138378|ref|ZP_07497734.1| threonyl-tRNA synthetase [Escherichia coli H736]
 gi|312966921|ref|ZP_07781139.1| threonyl-tRNA synthetase [Escherichia coli 2362-75]
 gi|331642316|ref|ZP_08343451.1| threonine--tRNA ligase [Escherichia coli H736]
 gi|331653119|ref|ZP_08354124.1| threonine--tRNA ligase [Escherichia coli M718]
 gi|67473036|sp|P0A8M3|SYT_ECOLI RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|67473037|sp|P0A8M4|SYT_ECOL6 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|67473038|sp|P0A8M5|SYT_SHIFL RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|122957455|sp|Q0T4S9|SYT_SHIF8 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|123084457|sp|Q1RB76|SYT_ECOUT RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|123343967|sp|Q0THB0|SYT_ECOL5 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|123732358|sp|Q3Z267|SYT_SHISS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|166223339|sp|A1ABQ2|SYT_ECOK1 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|226701400|sp|B7MAS9|SYT_ECO45 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|226701401|sp|B7NT58|SYT_ECO7I RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|226701403|sp|B7N556|SYT_ECOLU RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|226701404|sp|B1LE12|SYT_ECOSM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|229557979|sp|B1XGI1|SYT_ECODH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|254783521|sp|B7USA2|SYT_ECO27 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|254783523|sp|B7MVJ7|SYT_ECO81 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|259516437|sp|C4ZYI1|SYT_ECOBW RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|5107656|pdb|1QF6|A Chain A, Structure Of E. Coli Threonyl-Trna Synthetase Complexed
           With Its Cognate Trna
 gi|26108373|gb|AAN80575.1|AE016761_150 Threonyl-tRNA synthetase [Escherichia coli CFT073]
 gi|1742811|dbj|BAA15498.1| threonyl-tRNA synthetase [Escherichia coli str. K12 substr. W3110]
 gi|1788013|gb|AAC74789.1| threonyl-tRNA synthetase [Escherichia coli str. K-12 substr.
           MG1655]
 gi|24051829|gb|AAN43102.1| threonine tRNA synthetase [Shigella flexneri 2a str. 301]
 gi|30041263|gb|AAP16992.1| threonine tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|73855438|gb|AAZ88145.1| threonine tRNA synthetase [Shigella sonnei Ss046]
 gi|91072507|gb|ABE07388.1| threonyl-tRNA synthetase [Escherichia coli UTI89]
 gi|110343432|gb|ABG69669.1| threonyl-tRNA synthetase [Escherichia coli 536]
 gi|110615019|gb|ABF03686.1| threonine tRNA synthetase [Shigella flexneri 5 str. 8401]
 gi|115513017|gb|ABJ01092.1| threonine tRNA synthetase [Escherichia coli APEC O1]
 gi|169889212|gb|ACB02919.1| threonyl-tRNA synthetase [Escherichia coli str. K-12 substr. DH10B]
 gi|170517930|gb|ACB16108.1| threonyl-tRNA synthetase [Escherichia coli SMS-3-5]
 gi|188487464|gb|EDU62567.1| threonyl-tRNA synthetase [Escherichia coli 53638]
 gi|190908082|gb|EDV67674.1| threonyl-tRNA synthetase [Escherichia coli F11]
 gi|194416606|gb|EDX32741.1| threonyl-tRNA synthetase [Shigella dysenteriae 1012]
 gi|194422590|gb|EDX38588.1| threonyl-tRNA synthetase [Escherichia coli 101-1]
 gi|215265010|emb|CAS09396.1| threonyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69]
 gi|218365357|emb|CAR03078.1| threonyl-tRNA synthetase [Escherichia coli S88]
 gi|218369700|emb|CAR17469.1| threonyl-tRNA synthetase [Escherichia coli IAI39]
 gi|218427227|emb|CAR08113.2| threonyl-tRNA synthetase [Escherichia coli ED1a]
 gi|218432315|emb|CAR13205.1| threonyl-tRNA synthetase [Escherichia coli UMN026]
 gi|222033474|emb|CAP76215.1| Threonyl-tRNA synthetase [Escherichia coli LF82]
 gi|226900425|gb|EEH86684.1| threonyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
 gi|238863657|gb|ACR65655.1| threonyl-tRNA synthetase [Escherichia coli BW2952]
 gi|242377442|emb|CAQ32194.1| threonyl-tRNA synthetase [Escherichia coli BL21(DE3)]
 gi|253324370|gb|ACT28972.1| threonyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|253973680|gb|ACT39351.1| threonyl-tRNA synthetase [Escherichia coli B str. REL606]
 gi|253977874|gb|ACT43544.1| threonyl-tRNA synthetase [Escherichia coli BL21(DE3)]
 gi|260449158|gb|ACX39580.1| threonyl-tRNA synthetase [Escherichia coli DH1]
 gi|281600917|gb|ADA73901.1| Threonyl-tRNA synthetase [Shigella flexneri 2002017]
 gi|284921639|emb|CBG34711.1| threonyl-tRNA synthetase [Escherichia coli 042]
 gi|291427426|gb|EFF00453.1| threonyl-tRNA synthetase [Escherichia coli FVEC1412]
 gi|291432685|gb|EFF05664.1| threonyl-tRNA synthetase [Escherichia coli B185]
 gi|291470503|gb|EFF12987.1| threonyl-tRNA synthetase [Escherichia coli B354]
 gi|294493274|gb|ADE92030.1| threonyl-tRNA synthetase [Escherichia coli IHE3034]
 gi|298278303|gb|EFI19817.1| threonyl-tRNA synthetase [Escherichia coli FVEC1302]
 gi|299880135|gb|EFI88346.1| threonyl-tRNA synthetase [Escherichia coli MS 196-1]
 gi|300306094|gb|EFJ60614.1| threonyl-tRNA synthetase [Escherichia coli MS 200-1]
 gi|300400020|gb|EFJ83558.1| threonyl-tRNA synthetase [Escherichia coli MS 69-1]
 gi|300406264|gb|EFJ89802.1| threonyl-tRNA synthetase [Escherichia coli MS 45-1]
 gi|300456146|gb|EFK19639.1| threonyl-tRNA synthetase [Escherichia coli MS 21-1]
 gi|305851676|gb|EFM52129.1| threonyl-tRNA synthetase [Escherichia coli NC101]
 gi|307553740|gb|ADN46515.1| threonine tRNA synthetase [Escherichia coli ABU 83972]
 gi|307626794|gb|ADN71098.1| threonyl-tRNA synthetase [Escherichia coli UM146]
 gi|309701942|emb|CBJ01255.1| threonyl-tRNA synthetase [Escherichia coli ETEC H10407]
 gi|312288385|gb|EFR16287.1| threonyl-tRNA synthetase [Escherichia coli 2362-75]
 gi|315136359|dbj|BAJ43518.1| threonyl-tRNA synthetase [Escherichia coli DH1]
 gi|315286432|gb|EFU45867.1| threonyl-tRNA synthetase [Escherichia coli MS 110-3]
 gi|315290480|gb|EFU49854.1| threonyl-tRNA synthetase [Escherichia coli MS 153-1]
 gi|320181253|gb|EFW56172.1| Threonyl-tRNA synthetase [Shigella boydii ATCC 9905]
 gi|320194570|gb|EFW69201.1| Threonyl-tRNA synthetase [Escherichia coli WV_060327]
 gi|323937321|gb|EGB33600.1| threonyl-tRNA synthetase [Escherichia coli E1520]
 gi|323940615|gb|EGB36806.1| threonyl-tRNA synthetase [Escherichia coli E482]
 gi|323952226|gb|EGB48099.1| threonyl-tRNA synthetase [Escherichia coli H252]
 gi|323956620|gb|EGB52358.1| threonyl-tRNA synthetase [Escherichia coli H263]
 gi|323962102|gb|EGB57698.1| threonyl-tRNA synthetase [Escherichia coli H489]
 gi|323973902|gb|EGB69074.1| threonyl-tRNA synthetase [Escherichia coli TA007]
 gi|323978098|gb|EGB73184.1| threonyl-tRNA synthetase [Escherichia coli TW10509]
 gi|324011501|gb|EGB80720.1| threonyl-tRNA synthetase [Escherichia coli MS 60-1]
 gi|331039114|gb|EGI11334.1| threonine--tRNA ligase [Escherichia coli H736]
 gi|331049217|gb|EGI21289.1| threonine--tRNA ligase [Escherichia coli M718]
 gi|332758628|gb|EGJ88947.1| threonyl-tRNA synthetase [Shigella flexneri 2747-71]
 gi|333003769|gb|EGK23305.1| threonyl-tRNA synthetase [Shigella flexneri VA-6]
 gi|333004377|gb|EGK23908.1| threonyl-tRNA synthetase [Shigella flexneri K-218]
 gi|333006570|gb|EGK26070.1| threonyl-tRNA synthetase [Shigella flexneri K-272]
 gi|333018789|gb|EGK38082.1| threonyl-tRNA synthetase [Shigella flexneri K-227]
          Length = 642

 Score =  681 bits (1756), Expect = 0.0,   Method: Composition-based stats.
 Identities = 301/655 (45%), Positives = 433/655 (66%), Gaps = 19/655 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D  D +  +  +
Sbjct: 1   MPV---ITLPDGSQRHYDHAVSPMDVALDIGPGLAKACIAGRVNGELVDACDLIENDAQL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L +IRHSCAH++  A++ +WP  ++AIGP+I++GFYYD D ++  + +++
Sbjct: 58  SIITAKDEEGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVIDNGFYYDVDLDRTLTQEDV 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M E+  ++   +K+ +S  +ARE F ++ E+YKV IL E+I   +   LY   E
Sbjct: 118 EALEKRMHELAEKNYDVIKKKVSWHEARETFANRGESYKVSILDENIAHDDKPGLYFHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KLMK AGAYWRGDSN  ML RIYGTAW  ++ L  YL  L
Sbjct: 178 YVDMCRGPHVPNMRFCHHF-KLMKTAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF+ L  ++R K+K+  Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW+++GHWD+Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 297 FMMDRVLWEKTGHWDNYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+ +E      L+  +Y  
Sbjct: 351 LPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI+VKLSTRPEKR+GSD +WD AE  +   L+      ++ I     LGEGAFYGP
Sbjct: 411 FGFEKIVVKLSTRPEKRIGSDEMWDRAEADLAVALE------ENNIPFEYQLGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF+LPSR +A YV   +E+  PVMIHRA+ GS+ERFIGI
Sbjct: 465 KIEFTLYDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E F G  P WL+P+Q ++  IT S  EY  E+   L +  + ++ D RNE I +KIRE
Sbjct: 525 LTEEFAGFFPTWLAPVQVVIMNITDSQSEYVNELTQKLSNAGIRVKADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           H+++++P +++CGDKE     + +R         + + + I  L +E      ++
Sbjct: 585 HTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSMDVNEVIEKLQQEIRSRSLKQ 639


>gi|157158126|ref|YP_001463015.1| threonyl-tRNA synthetase [Escherichia coli E24377A]
 gi|157161181|ref|YP_001458499.1| threonyl-tRNA synthetase [Escherichia coli HS]
 gi|170019932|ref|YP_001724886.1| threonyl-tRNA synthetase [Escherichia coli ATCC 8739]
 gi|193068904|ref|ZP_03049863.1| threonyl-tRNA synthetase [Escherichia coli E110019]
 gi|209919078|ref|YP_002293162.1| threonyl-tRNA synthetase [Escherichia coli SE11]
 gi|218695280|ref|YP_002402947.1| threonyl-tRNA synthetase [Escherichia coli 55989]
 gi|256018088|ref|ZP_05431953.1| threonyl-tRNA synthetase [Shigella sp. D9]
 gi|332279130|ref|ZP_08391543.1| threonyl-tRNA synthetase [Shigella sp. D9]
 gi|166987321|sp|A7ZMI6|SYT_ECO24 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|166987322|sp|A8A0R2|SYT_ECOHS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|189083607|sp|B1IPK9|SYT_ECOLC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|238065113|sp|B6IBD7|SYT_ECOSE RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|254783522|sp|B7L6J2|SYT_ECO55 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|157066861|gb|ABV06116.1| threonyl-tRNA synthetase [Escherichia coli HS]
 gi|157080156|gb|ABV19864.1| threonyl-tRNA synthetase [Escherichia coli E24377A]
 gi|169754860|gb|ACA77559.1| threonyl-tRNA synthetase [Escherichia coli ATCC 8739]
 gi|192957699|gb|EDV88143.1| threonyl-tRNA synthetase [Escherichia coli E110019]
 gi|209912337|dbj|BAG77411.1| threonyl-tRNA synthase [Escherichia coli SE11]
 gi|218352012|emb|CAU97745.1| threonyl-tRNA synthetase [Escherichia coli 55989]
 gi|320197902|gb|EFW72510.1| Threonyl-tRNA synthetase [Escherichia coli EC4100B]
 gi|323948091|gb|EGB44082.1| threonyl-tRNA synthetase [Escherichia coli H120]
 gi|324016472|gb|EGB85691.1| threonyl-tRNA synthetase [Escherichia coli MS 117-3]
 gi|332101482|gb|EGJ04828.1| threonyl-tRNA synthetase [Shigella sp. D9]
          Length = 642

 Score =  680 bits (1755), Expect = 0.0,   Method: Composition-based stats.
 Identities = 300/655 (45%), Positives = 433/655 (66%), Gaps = 19/655 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D  D +  +  +
Sbjct: 1   MPV---ITLPDGSQRHYDHAVSPMDVALDIGPGLAKACIAGRVNGELVDACDLIENDAQL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L +IRHSCAH++  A++ +WP  ++AIGP+I++GFYYD D ++  + +++
Sbjct: 58  SIITAKDEDGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVIDNGFYYDVDLDRTLTQEDV 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M E+  ++   +K+ +S  +ARE F ++ E+YKV IL E+I   +   LY   E
Sbjct: 118 EALEKRMHELAEKNYDVIKKKVSWHEARETFANRGESYKVSILDENIAHDDKPGLYFHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KLMK AGAYWRGDSN  ML RIYGTAW  ++ L  YL  L
Sbjct: 178 YVDMCRGPHVPNMRFCHHF-KLMKTAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF+ L  ++R K+K+  Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW+++GHWD+Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 297 FMMDRVLWEKTGHWDNYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+ +E      L+  +Y  
Sbjct: 351 LPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI+VKLSTRPEKR+GSD +WD AE  +   L+      ++ I     LGEGAFYGP
Sbjct: 411 FGFEKIVVKLSTRPEKRIGSDEMWDRAEADLAVALE------ENNIPFEYQLGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF+LPSR +A YV   +E+  PVMIHRA+ GS+ERFIGI
Sbjct: 465 KIEFTLYDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E F G  P WL+P+Q ++  IT S  +Y  E+   L +  + ++ D RNE I +KIRE
Sbjct: 525 LTEEFAGFFPTWLAPVQVVIMNITDSQSDYVNELTQKLSNAGIRVKADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           H+++++P +++CGDKE     + +R         + + + I  L +E      ++
Sbjct: 585 HTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSMDVNEVIEKLQQEIRSRSLKQ 639


>gi|146311380|ref|YP_001176454.1| threonyl-tRNA synthetase [Enterobacter sp. 638]
 gi|166987323|sp|A4W9M3|SYT_ENT38 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|145318256|gb|ABP60403.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Enterobacter
           sp. 638]
          Length = 642

 Score =  680 bits (1755), Expect = 0.0,   Method: Composition-based stats.
 Identities = 300/655 (45%), Positives = 429/655 (65%), Gaps = 19/655 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS + F    +  DVA  I   LAK  +A  +NG++ D SD +  +  +
Sbjct: 1   MPV---ITLPDGSQRQFDRAVSPMDVALDIGPGLAKATIAGRVNGELVDASDLIENDAQL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   + +IRHSCAH++  A++ +WP  ++AIGP+I++GFYYD D +   + +++
Sbjct: 58  SIITAKDAEGIEIIRHSCAHLLGHAIKQLWPNTKMAIGPVIDNGFYYDVDLDHTLTQEDI 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M E+   +   +K+ +S  +ARE F  + E YKV IL E+I   +   LY   E
Sbjct: 118 DALEKRMHELAETNYDVIKKNVSWHEARETFVKRGENYKVSILDENISHDDKPGLYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KLMK+AGAYWRGDSN  ML RIYGTAW  ++ L  YL  L
Sbjct: 178 YVDMCRGPHVPNMRFCHHF-KLMKIAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLVRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF+ L +++R K+K+  Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELETFVRSKLKEYQYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW+++GHWD+Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 297 FMMDRVLWEKTGHWDNYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT+ Q+ +E      ++  +Y  
Sbjct: 351 LPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEGQVRDEVNACIRMVYDMYST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI+VKLSTRPEKR+GSD  WD AE  +   L+      ++ I     LGEGAFYGP
Sbjct: 411 FGFEKIVVKLSTRPEKRIGSDETWDRAEADLAVALE------ENNIPFEYQLGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF+LP R +A YV   +E+  PVMIHRA+ GSIERFIGI
Sbjct: 465 KIEFTLYDCLDRAWQCGTVQLDFSLPQRLSASYVGEDNERQIPVMIHRAILGSIERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E F G  P WL+P+Q +V  IT S  +Y +E+   L++  + ++ D RNE I +KIRE
Sbjct: 525 LTEEFAGFFPTWLAPVQVVVMNITDSQADYVKELTQKLQNAGIRVKADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           H+++++P +++CGDKE     + +R         + + + I  L  E      Q+
Sbjct: 585 HTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSLDVNEVIEKLRLEIRSRSLQQ 639


>gi|239993779|ref|ZP_04714303.1| threonyl-tRNA synthetase [Alteromonas macleodii ATCC 27126]
          Length = 638

 Score =  680 bits (1755), Expect = 0.0,   Method: Composition-based stats.
 Identities = 303/647 (46%), Positives = 422/647 (65%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS + F    +  DVA  I   LAK  +A  +NG++ D  D +  +  +
Sbjct: 1   MPV---ITLPDGSQRAFDNAVSVLDVANDIGPGLAKATIAGKVNGELVDAVDMIDADAQL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           +IIT +D   L ++RHSCAH++  A++ +WP  ++AIGP+I++GFYYD D E+  + ++L
Sbjct: 58  QIITAKDDEGLEILRHSCAHLLGHAIKQLWPNTKMAIGPVIDNGFYYDVDMEESLTQEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
           A++EK+M E+   +   +K  +S  +AR+ FE++ E+YK+EIL E+I   +   LY   E
Sbjct: 118 AKLEKRMLELAKTNYDVVKNKVSWREARDAFEARGESYKMEILDENISKDDRPALYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KLMKVAGAYWRGDS+  ML RIYGTAW  +++L  YL  L
Sbjct: 178 YTDMCRGPHVPNMKFCHHF-KLMKVAGAYWRGDSDNKMLQRIYGTAWADKKQLKSYLQRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+EKRDHRK+ + ++LFH  E+  G++FWH  GW I+  L SY+R+K+++  Y+E+  P
Sbjct: 237 EEAEKRDHRKIGKALNLFHWQEEAPGMVFWHNDGWSIYTELESYVRKKLREYGYDEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW++SGHWD Y  NMF       T  + R +A+KPMNCPGHV +FN GLKSYR+
Sbjct: 297 LMMDRSLWEKSGHWDKYAENMFT------TESEKREYAVKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFG  +RNEPSG+LHGLMRVRGFTQDDAH+FCT+EQ+  E      ++   Y  
Sbjct: 351 LPLRMAEFGCCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQILEEVSGCIKMVYETYAA 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFE I VKLSTRPEKRVG+D +WD +E  +   L        + I      GEGAFYGP
Sbjct: 411 FGFENIKVKLSTRPEKRVGADEIWDKSEAALADALKA------NDIEFDYQPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF++P R  + YV    E+  PVMIHRA+ GS+ERFIGI
Sbjct: 465 KIEFTLHDCLDRAWQCGTVQLDFSMPGRLGSTYVAEDGERKVPVMIHRAILGSLERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E F G  PLWL+P Q +V  IT    EYA +    L+      ++D RNE I +KIRE
Sbjct: 525 LTEEFAGFFPLWLAPQQVVVMNITDKQAEYASDCVKKLQELGFRAKSDLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H++K+IP +++ GDKE     + +R        K+ L D I +  +E
Sbjct: 585 HTLKRIPYMLVVGDKEMEAGEVAVRSRRGDDLGKMRLEDFIAMAQQE 631


>gi|43066|emb|CAA23560.1| unnamed protein product [Escherichia coli]
          Length = 642

 Score =  680 bits (1755), Expect = 0.0,   Method: Composition-based stats.
 Identities = 301/655 (45%), Positives = 434/655 (66%), Gaps = 19/655 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D  D +  +  +
Sbjct: 1   MPV---ITLPDGSQRHYDHAVSPMDVALDIGPGLAKACIAGRVNGELVDACDLIENDAQL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L +IRHSCAH++  A++ +WP  ++AIGP+I++GFYYD D ++  + +++
Sbjct: 58  SIITAKDEEGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVIDNGFYYDVDLDRTLTQEDV 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M E+  ++   +K+ +S  +ARE F ++ E+YKV IL E+I   +   LY   E
Sbjct: 118 EALEKRMHELAEKNYDVIKKKVSWHEARETFANRGESYKVSILDENIAHDDKPGLYFHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +     +F KLMK AGAYWRGDSN  ML RIYGTAW  ++ L  YL  L
Sbjct: 178 YVDMCRGPHVPNMRFCHRF-KLMKTAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF+ L  ++R K+K+  Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW+++GHWD+Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 297 FMMDRVLWEKTGHWDNYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+ +E      L+  +Y  
Sbjct: 351 LPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI+VKLSTRPEKR+GSD +WD AE  +   L+      ++ I     LGEGAFYGP
Sbjct: 411 FGFEKIVVKLSTRPEKRIGSDEMWDRAEADLAVALE------ENNIPFEYQLGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF+LPSR +A YV   +E+  PVMIHRA+ GS+ERFIGI
Sbjct: 465 KIEFTLYDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E F G  P WL+P+Q ++  IT S  EY  E+   L +  + ++ D RNE I +KIRE
Sbjct: 525 LTEEFAGFFPTWLAPVQVVIMNITDSQSEYVNELTQKLSNAGIRVKADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           H+++++P +++CGDKE     + +R         + + + I  L +E      ++
Sbjct: 585 HTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSMDVNEVIEKLQQEIRSRSLKQ 639


>gi|163737374|ref|ZP_02144791.1| threonyl-tRNA synthetase [Phaeobacter gallaeciensis BS107]
 gi|161388900|gb|EDQ13252.1| threonyl-tRNA synthetase [Phaeobacter gallaeciensis BS107]
          Length = 648

 Score =  680 bits (1755), Expect = 0.0,   Method: Composition-based stats.
 Identities = 325/652 (49%), Positives = 435/652 (66%), Gaps = 10/652 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
           + + LTFPDG+ +++    T ++VA SIS SLAKKA++  +NG   DL  P+  + +I I
Sbjct: 2   AQVSLTFPDGNARSYDAGVTPAEVAASISTSLAKKAISATVNGAHWDLQWPIDSDAAIAI 61

Query: 62  ITPEDPR-SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            T +D   +  +IRH  AH+MA AVQ IWP+ +V IGP+IE+G+YYDFD+ +PF+ ++L 
Sbjct: 62  HTMKDEEQANELIRHDLAHVMARAVQEIWPDTKVTIGPVIENGWYYDFDRAEPFTPEDLG 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEKKM+EII +      +    ++A + +    E YKVE++ESIP  E + +Y  G+W 
Sbjct: 122 TIEKKMKEIINKRDEVRTEVWERDRAIQHYTDLNEPYKVELIESIPGDEPLRMYWHGDWQ 181

Query: 181 DLCRGPHVRSTGQ-VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           DLCRGPH++ TGQ     FKLM +AGAYWRGDS+R ML RIYG A+  +++L  +L+ LE
Sbjct: 182 DLCRGPHLQHTGQLPGDAFKLMSIAGAYWRGDSDRAMLQRIYGVAFTGKEKLKAHLHMLE 241

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+ KRDHRKL REM+LFH+ E+  G IFWH  GWKI+ TL  YMRR + +D Y E+NTPQ
Sbjct: 242 EAAKRDHRKLGREMNLFHMQEEAPGQIFWHPNGWKIYTTLQDYMRRMQDRDGYVEVNTPQ 301

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW+ SGHWD Y+ NMF V+  +D  ++    ALKPMNCP HV VFN GLKSYR+L
Sbjct: 302 VVDRKLWEASGHWDKYQENMFIVEVDEDHAREKAVNALKPMNCPCHVQVFNQGLKSYRDL 361

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFGS  R EPSG+LHG+MRVRGFTQDD H+FC ++Q+ +E  K    +  +Y D 
Sbjct: 362 PLRMAEFGSCARYEPSGALHGIMRVRGFTQDDGHIFCAEDQIESETAKFIAFLSKVYADL 421

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF    +KLSTRPEKR+GSD  WD  E  +                  +L GEGAFYGPK
Sbjct: 422 GFHDWTIKLSTRPEKRIGSDESWDLVEKALGDACKAAGY------EYELLEGEGAFYGPK 475

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ L DAIGR+WQCGT+QVD NLP R +A ++     K  P M+HRA  GS ERFIGI+
Sbjct: 476 LEFTLTDAIGRNWQCGTLQVDPNLPERLDANFIGQDGSKHRPFMLHRATLGSFERFIGIL 535

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE   G LP WL+P Q +V +ITS A +Y  E+   L++  +  E D RNE INYK+REH
Sbjct: 536 IEEHAGKLPFWLAPRQVVVASITSDADDYVNEVVETLRAAGVRAEADIRNEKINYKVREH 595

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDC 650
           S+ K+P+I+  G +E  ER++ +RR G   T+  +L      L  E+ PPD 
Sbjct: 596 SVGKVPVILAVGHREVEERTVSVRRLGEKQTKVEALDAVTKALAVEATPPDL 647


>gi|330445795|ref|ZP_08309447.1| threonyl-tRNA synthetase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328489986|dbj|GAA03944.1| threonyl-tRNA synthetase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 643

 Score =  680 bits (1755), Expect = 0.0,   Method: Composition-based stats.
 Identities = 304/648 (46%), Positives = 430/648 (66%), Gaps = 20/648 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS + F    +  DVA SI   LAK  +A  ++G   D  D +  + S+
Sbjct: 1   MPV---ITLPDGSQRQFDAPVSTMDVALSIGPGLAKATIAGRVDGVRVDACDLIENDASL 57

Query: 60  EIITPEDPR-SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           EIIT +D    L ++RHSCAH++  A++ ++PE ++AIGP I++GFYYD D EQ  + ++
Sbjct: 58  EIITAKDEEDGLEIVRHSCAHLLGHAIKQLYPEAKMAIGPTIDNGFYYDIDLEQSLTQED 117

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQG 177
           L  IEK+M E+       +K+ +S ++AR+ FE++ E YK+EIL E++   +   LY   
Sbjct: 118 LEVIEKRMLELAKTKYQVVKKKVSWQEARDAFEARGETYKIEILDENVARDDRPGLYHHE 177

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           E+ D+CRGPHV   G  + F KL+ VAGAYWRG+S+  ML RIYGTA++ ++ L  +L  
Sbjct: 178 EYIDMCRGPHVPHMGFCQNF-KLLSVAGAYWRGNSDNKMLQRIYGTAFHDKKALKAHLTR 236

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
           LEE+ KRDHRK+ +++DLFH+ ++  G++FWH  GW IF+ L  ++R K+ + DY+E+  
Sbjct: 237 LEEAAKRDHRKIGKQLDLFHMQQEAPGMVFWHHNGWTIFRELEVFVREKLNEYDYQEVKG 296

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P ++D+ LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR
Sbjct: 297 PLMMDRVLWERSGHWDKYADAMFT------TSSENREYAIKPMNCPGHVQIFNQGLKSYR 350

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +LP+R+AEFGS +RNEPSGSLHG+MRVRGFTQDDAH+FCT+ Q+  E      ++   YK
Sbjct: 351 DLPLRMAEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTEAQVQQEVTSCIEMVYDTYK 410

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
            FGF+ I+VKLSTRPEKRVGSDA+WD AE+ +   L+++       I   +  GEGAFYG
Sbjct: 411 TFGFDNIVVKLSTRPEKRVGSDAMWDKAESDLVTALESMN------IPFEIQEGEGAFYG 464

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK E+ L D + R WQCGT+Q+DF LP R  A YV   +E+  PVMIHRA+ GS+ERFIG
Sbjct: 465 PKIEFTLHDCLDRAWQCGTVQLDFALPERLGATYVGEDNERHTPVMIHRAILGSLERFIG 524

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           I+IE++ G  P WL+P QA+V  IT +  EY QEI   LK   + +  D RNE I +KIR
Sbjct: 525 ILIEDYAGFFPTWLAPQQAVVMNITDAQSEYVQEIVEKLKKCGIRVNADLRNEKIGFKIR 584

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           EH++K++P +++CGDKE     + +R        K  + + +  + +E
Sbjct: 585 EHTLKRVPFMLVCGDKEVEAGVVAVRTRKGKDLGKFKIDELVAFMQEE 632


>gi|323493467|ref|ZP_08098589.1| threonyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
 gi|323312290|gb|EGA65432.1| threonyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
          Length = 642

 Score =  680 bits (1755), Expect = 0.0,   Method: Composition-based stats.
 Identities = 297/642 (46%), Positives = 427/642 (66%), Gaps = 17/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  +VA+SI   LAK  +A  ++G   D  D +  + S+EIIT +
Sbjct: 4   ITLPDGSQRQFDNPVSTLEVAQSIGPGLAKATIAGRVDGNRVDACDLIEQDASLEIITVK 63

Query: 66  DPR-SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  A++ ++PE ++AIGP I++GFYYD D E   + ++L +IEK
Sbjct: 64  DEDDGLEIVRHSCAHLLGHAIKQLFPEAKMAIGPTIDNGFYYDIDLEHSLTQEDLEKIEK 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLC 183
           +M+E+       +K+ +S ++AR+ FE++ E YK+EIL E++   +   LY   E+ D+C
Sbjct: 124 RMKELAKTKYQVIKKKVSWQEARDAFEARGETYKMEILDENVARDDRPGLYHHEEYIDMC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV   G  + F  L  VAGAYWRG+S+  ML RIYGTA++ ++ L  +L  LEE+ K
Sbjct: 184 RGPHVPHMGFCQHFTLL-NVAGAYWRGNSDNKMLQRIYGTAFHDKKALKAHLTRLEEAAK 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRK+ +++DLFH+ ++  G++FWH  GW IF+ L  ++R K+ +  Y+E+  P ++D+
Sbjct: 243 RDHRKIGKQLDLFHMQQEAPGMVFWHHNGWSIFRDLEVFVREKLTEYGYQEVKGPLIMDR 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y   MF       T  + R +ALKPMNCPGHV +FN GLKSYR+LP+R+
Sbjct: 303 VLWERSGHWDKYAEAMFT------TSSENRDYALKPMNCPGHVQIFNQGLKSYRDLPLRM 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHG+MRVRGFTQDDAH+FCT+ Q+ +E      ++   Y+ FGF+ 
Sbjct: 357 AEFGSCHRNEPSGALHGIMRVRGFTQDDAHIFCTESQIQDEVTSCIKMVYDTYQTFGFDN 416

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+VKLSTRPEKRVGSD +WD +E  +K  L+ +       I   +  GEGAFYGPK E+ 
Sbjct: 417 IVVKLSTRPEKRVGSDEIWDQSEEALKQSLEAM------DIPYEIQEGEGAFYGPKIEFT 470

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D + R WQCGT+Q+DFNLP R  A YV+ ++E+  PVMIHRA+ GS+ERFIGI+IE +
Sbjct: 471 LHDCLDRAWQCGTVQLDFNLPGRLGATYVDENNERQVPVMIHRAILGSLERFIGILIEEY 530

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WLSP QA++  IT    +Y QE+A  L+   +  + D RNE I +KIREH++K+
Sbjct: 531 YGFFPTWLSPEQAVIMNITDKQSDYVQEVAQKLQKCGIRAKADLRNEKIGFKIREHTLKR 590

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P +++CGD+E     I +R        K  + D I  +  E
Sbjct: 591 VPFMLVCGDQEMEAGEIAVRTRKGKDLGKFKVDDFISYIQDE 632


>gi|193065767|ref|ZP_03046830.1| threonyl-tRNA synthetase [Escherichia coli E22]
 gi|194428543|ref|ZP_03061082.1| threonyl-tRNA synthetase [Escherichia coli B171]
 gi|218554286|ref|YP_002387199.1| threonyl-tRNA synthetase [Escherichia coli IAI1]
 gi|260844071|ref|YP_003221849.1| threonyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009]
 gi|260855585|ref|YP_003229476.1| threonyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368]
 gi|260868246|ref|YP_003234648.1| threonyl-tRNA synthetase [Escherichia coli O111:H- str. 11128]
 gi|293446093|ref|ZP_06662515.1| threonyl-tRNA synthetase [Escherichia coli B088]
 gi|331668404|ref|ZP_08369252.1| threonine--tRNA ligase [Escherichia coli TA271]
 gi|331677592|ref|ZP_08378267.1| threonine--tRNA ligase [Escherichia coli H591]
 gi|226701402|sp|B7M1C7|SYT_ECO8A RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|192926539|gb|EDV81170.1| threonyl-tRNA synthetase [Escherichia coli E22]
 gi|194413421|gb|EDX29704.1| threonyl-tRNA synthetase [Escherichia coli B171]
 gi|195182909|dbj|BAG66479.1| threonyl-tRNA synthetase [Escherichia coli O111:H-]
 gi|218361054|emb|CAQ98632.2| threonyl-tRNA synthetase [Escherichia coli IAI1]
 gi|257754234|dbj|BAI25736.1| threonyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368]
 gi|257759218|dbj|BAI30715.1| threonyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009]
 gi|257764602|dbj|BAI36097.1| threonyl-tRNA synthetase [Escherichia coli O111:H- str. 11128]
 gi|291322923|gb|EFE62351.1| threonyl-tRNA synthetase [Escherichia coli B088]
 gi|323153043|gb|EFZ39312.1| threonyl-tRNA synthetase [Escherichia coli EPECa14]
 gi|331063598|gb|EGI35509.1| threonine--tRNA ligase [Escherichia coli TA271]
 gi|331074052|gb|EGI45372.1| threonine--tRNA ligase [Escherichia coli H591]
          Length = 642

 Score =  680 bits (1755), Expect = 0.0,   Method: Composition-based stats.
 Identities = 301/655 (45%), Positives = 433/655 (66%), Gaps = 19/655 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D  D +  +  +
Sbjct: 1   MPV---ITLPDGSQRHYDHAVSPMDVALDIGPGLAKACIAGRVNGELVDACDLIENDAQL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L +IRHSCAH++  A++ +WP  ++AIGP+I++GFYYD D ++  + +++
Sbjct: 58  SIITAKDEDGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVIDNGFYYDVDLDRTLTQEDV 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M E+  ++   +K+ +S  +ARE F ++ E+YKV IL E+I   +   LY   E
Sbjct: 118 EALEKRMHELAEKNYDVIKKKVSWHEARETFANRGESYKVSILDENIAHDDKPGLYFHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KLMK AGAYWRGDSN  ML RIYGTAW  ++ L  YL  L
Sbjct: 178 YVDMCRGPHVPNMRFCHHF-KLMKTAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF+ L  ++R K+K+  Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW+++GHWD+Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 297 FMMDRVLWEKTGHWDNYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+ +E      L+  +Y  
Sbjct: 351 LPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI+VKLSTRPEKR+GSD +WD AE  +   L+      ++ I     LGEGAFYGP
Sbjct: 411 FGFEKIVVKLSTRPEKRIGSDEMWDRAEADLAVALE------ENNIPFEYQLGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF+LPSR +A YV   +E+  PVMIHRA+ GS+ERFIGI
Sbjct: 465 KIEFTLYDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E F G  P WL+P+Q ++  IT S  EY  E+   L +  + ++ D RNE I +KIRE
Sbjct: 525 LTEEFAGFFPTWLAPVQVVIMNITDSQSEYVNELTQKLSNAGIRVKADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           H+++++P +++CGDKE     + +R         + + + I  L +E      ++
Sbjct: 585 HTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSMDVNEVIEKLQQEIRSRSLKQ 639


>gi|319786721|ref|YP_004146196.1| threonyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1]
 gi|317465233|gb|ADV26965.1| threonyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1]
          Length = 634

 Score =  680 bits (1755), Expect = 0.0,   Method: Composition-based stats.
 Identities = 295/644 (45%), Positives = 431/644 (66%), Gaps = 16/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +T PDGS + F    T   VA+SI   LAK  VA  ++G++ D  D +  + ++ II
Sbjct: 1   MITITLPDGSQRQFEGPVTVLQVAQSIGAGLAKATVAGQVDGRLVDACDVIDHDATLRII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TP+D   + +IRHSCAH++  AV+ ++PEV++ IGP+I +GFYYD   E+PF+ D++A I
Sbjct: 61  TPKDEEGVEIIRHSCAHLVGHAVKQLYPEVKMVIGPVIAEGFYYDIYSERPFTPDDMAAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESI-PAKENVTLYRQGEWFD 181
           E++M+E+IA+D   +K+    E+   +F+++ E YK+ ++E + P    + LY   E+ D
Sbjct: 121 EQRMRELIAQDYDVVKKMTPREEVINVFKARGEDYKLRLIEDMGPEVTAMGLYYHQEYVD 180

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           +CRGPHV +T  +K F KL +++GAYWRGD+    L RIYGTAW  +++L  Y+  +EE+
Sbjct: 181 MCRGPHVPNTRFLKAF-KLTRISGAYWRGDAKNEQLQRIYGTAWADEKQLKAYIQRIEEA 239

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
           EKRDHR++ ++ DLFH+ E+  G++FWH KGW ++Q +  YMRR  ++  Y E+  PQ+L
Sbjct: 240 EKRDHRRIGKQQDLFHLQEEAPGLVFWHPKGWSVWQVVEQYMRRVYRETGYGEVRCPQIL 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D  LW++SGHWD+Y+ NMF       T  + RT+A+KPMNCPGHV +FN GL SYR+LP+
Sbjct: 300 DVSLWKKSGHWDNYQDNMFF------TESEKRTYAVKPMNCPGHVQIFNQGLHSYRDLPI 353

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R  EFGS +RNEPSG+LHG++RVRGFTQDD HVFCT++Q+ +E    H   + +Y DFGF
Sbjct: 354 RYGEFGSCHRNEPSGALHGILRVRGFTQDDGHVFCTEQQIESEVRAFHAQALKVYTDFGF 413

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           E I +K++ RP+ R+G DA WD AE+ ++  L          +    L GEGAFYGPK E
Sbjct: 414 EDIQIKIALRPDNRLGDDATWDKAEDALRSALRASG------VEWQELPGEGAFYGPKIE 467

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           Y LKDAIGR WQ GT+QVDF +P R  A YV+ +S++ HPVM+HRA+ GS+ERFIGI+IE
Sbjct: 468 YHLKDAIGRTWQLGTMQVDFMMPGRLGAEYVDENSQRRHPVMLHRAIVGSMERFIGILIE 527

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +  G  P WL+P+QA+V  IT    EY  E+  +L +    +E D RNE I +KIREH++
Sbjct: 528 HHAGQFPAWLAPVQAVVMNITDVQAEYVNEVRKVLANQGFRVEADLRNEKIGFKIREHTL 587

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +++P +++ GD+E    ++ +R         +S+ D    L  +
Sbjct: 588 QRVPYLLVVGDREKENGAVAVRTRSGEDLGTMSVSDFADTLRSQ 631


>gi|118595089|ref|ZP_01552436.1| Threonyl-tRNA synthetase, class IIa [Methylophilales bacterium
           HTCC2181]
 gi|118440867|gb|EAV47494.1| Threonyl-tRNA synthetase, class IIa [Methylophilales bacterium
           HTCC2181]
          Length = 635

 Score =  680 bits (1755), Expect = 0.0,   Method: Composition-based stats.
 Identities = 317/646 (49%), Positives = 456/646 (70%), Gaps = 18/646 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    ++ PDGS++++  + + +DVA+ I   LA+ A+A  +N ++ DLS  +  +  +
Sbjct: 1   MPE---ISLPDGSVRSYNTNVSVADVAQDIGEGLARAALAGIVNEQLVDLSHIISSDAEL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            I+T ++   + +IRHS AH++A AV+ ++PE QV IGP+I++GFYYDF  ++PF+ D+L
Sbjct: 58  SIVTAKNDEGIDIIRHSTAHLLANAVKELFPEAQVTIGPVIDEGFYYDFSYKRPFTPDDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM E+  +D P  +  +  ++A + F    E YK +I+ESIP  E+V+LY+QG++
Sbjct: 118 LVIEKKMAELAKKDLPIERSIMPRKEAIQFFSDLGEHYKSQIIESIPQSESVSLYKQGDF 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV ST ++K F KLMKVAGAYWRGDSN  ML RIYGTAW  + EL +YLY LE
Sbjct: 178 VDLCRGPHVPSTAKLKVF-KLMKVAGAYWRGDSNNEMLQRIYGTAWANKDELKEYLYRLE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+EKRDHRKL +++DLFH+ ++  G++FWH KGW ++  +  YMR+  KD  Y+EI TP 
Sbjct: 237 EAEKRDHRKLGKQLDLFHMQDNAPGMVFWHPKGWSLWLAVEDYMRQMFKDYGYKEIKTPT 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D+ LW++SGHW++Y+ NMF       T  + R +A+KPMNCPGHV VFN+ L SYR+L
Sbjct: 297 IIDKSLWEKSGHWENYQDNMFT------TASENRVYAVKPMNCPGHVEVFNNTLHSYRDL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT++Q+  E +  ++++   Y DF
Sbjct: 351 PLRLAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEDQIKEEVMVFNDMLFKAYADF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+ I+V LSTRPEKRVGSD +WD AE  ++  L          ++  +  GEGAFYGPK
Sbjct: 411 GFKDIVVMLSTRPEKRVGSDEVWDRAEEALESALKETG------LSYTMQPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            EY LKD++GR WQCGTIQ+DFNLP R  A Y++  + + +PVM+HRA+ GS+ERFIGI+
Sbjct: 465 IEYTLKDSLGRVWQCGTIQLDFNLPKRLGAEYIDEDNSRKNPVMLHRAIVGSMERFIGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE++ G+LPLWL+PIQ ++  I+ +  EYA+ +  + K   +  E+D RNE I YKIREH
Sbjct: 525 IEHYAGSLPLWLAPIQVVLLNISDAQKEYAKTLETIFKEKGIRCESDLRNEKITYKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           S+++IP +++ GD+E  E+ + +R         +++   I  L  +
Sbjct: 585 SMQRIPYMVVLGDREMQEKQVTVRTQSGEDLGAMAIDAFIQHLNSD 630


>gi|261867949|ref|YP_003255871.1| threonyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D11S-1]
 gi|261413281|gb|ACX82652.1| threonyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D11S-1]
          Length = 643

 Score =  680 bits (1755), Expect = 0.0,   Method: Composition-based stats.
 Identities = 296/648 (45%), Positives = 424/648 (65%), Gaps = 16/648 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPE 65
           +T PDGS + F    T  +VA+ I   LAK  +A  +NG+  D  D + E S + IIT +
Sbjct: 4   ITLPDGSQRQFDKPVTVLEVAQDIGVGLAKATIAGRVNGERKDACDLITEDSRVAIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           +   L +IRHS AH++  A++ ++P V++AIGP I++GFYYD D ++  + ++L  +EK+
Sbjct: 64  EEDGLEIIRHSTAHLLGHAIKQLFPNVKMAIGPTIDNGFYYDVDLDRSLTQEDLDALEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K  +S ++AR+ F  + E YK+ IL E+I       LY   E+ D+CR
Sbjct: 124 MLELAKTNYDVIKTPVSWQEARDTFGKRGEPYKMAILDENIERTATPALYHHQEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +      F KL K+AGAYWRGDS   ML RIYGTAW  +++L  YL+ LEE+ KR
Sbjct: 184 GPHVPNMRFCHHF-KLQKIAGAYWRGDSKNKMLQRIYGTAWADKKQLEAYLHRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQH 303
           DHRK+ + +DL+H+ E+  G++FWH  GW IF+ L +++R K+ + DY+E+  P ++D+ 
Sbjct: 243 DHRKIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW +Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWQNYGDLMFT------TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FC  +Q+ +E      ++  IY  FGFE I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCMPDQVESEVTSCIKMVYDIYSTFGFENI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPEKR+GSD +WD AE  +   L+       + ++  +  GEGAFYGPK E+ L
Sbjct: 417 KVKLSTRPEKRIGSDEMWDKAEADLAKALEH------NSLSYEIQEGEGAFYGPKLEFAL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D++ R+WQCGTIQ+DF LP R NA YV   +E+  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 TDSLDREWQCGTIQLDFFLPERLNASYVGEDNERKVPVMIHRAILGSIERFIGIITEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P Q +V  IT S  EY Q++A  L    L ++TD RNE + +KIREH+++++
Sbjct: 531 GFFPAWLAPTQVVVMNITDSQSEYVQKVAKQLSDAGLRVKTDLRNEKVGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           P +++CGDKE     + +R          ++ + + IL K+    + +
Sbjct: 591 PYMLVCGDKEIEAGKVAVRTRKGQDLGTFTVEEFLDILKKQVRNRELK 638


>gi|261250893|ref|ZP_05943467.1| threonyl-tRNA synthetase [Vibrio orientalis CIP 102891]
 gi|260937766|gb|EEX93754.1| threonyl-tRNA synthetase [Vibrio orientalis CIP 102891]
          Length = 642

 Score =  680 bits (1754), Expect = 0.0,   Method: Composition-based stats.
 Identities = 298/642 (46%), Positives = 426/642 (66%), Gaps = 17/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  DVA+SI   LAK  +A  ++G   D  D +  + S+EIIT +
Sbjct: 4   ITLPDGSQRQFDNPVSTLDVAQSIGPGLAKATIAGRVDGNRVDACDLIEQDASLEIITVK 63

Query: 66  DP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  A++ ++PE ++AIGP I++GFYYD D E   + ++L +IEK
Sbjct: 64  DEVDGLEIVRHSCAHLLGHAIKQLYPEAKMAIGPTIDNGFYYDIDLEYSLTQEDLEKIEK 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLC 183
           +M+E+       +K+ +S ++AR+ FE++ E YK+EIL E++   +   LY   E+ D+C
Sbjct: 124 RMKELAKTKYQVIKKKVSWQEARDAFEARGETYKMEILDENVSRDDRPGLYHHEEYIDMC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV   G  + F  L  VAGAYWRG+S+  ML RIYGTA++ ++ L  +L  LEE+ K
Sbjct: 184 RGPHVPHMGFCQHFTLL-NVAGAYWRGNSDNKMLQRIYGTAFHDKKALKAHLTRLEEAAK 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRK+ +++DLFH+ ++  G++FWH  GW IF+ L  ++R K+ +  Y+E+  P ++D+
Sbjct: 243 RDHRKIGKQLDLFHMQQEAPGMVFWHHNGWSIFRDLEVFVREKLTEYGYQEVKGPLIMDR 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y   MF       T  + R +ALKPMNCPGHV +FN GLKSYR+LP+R+
Sbjct: 303 VLWERSGHWDKYAEAMFT------TSSENREYALKPMNCPGHVQIFNQGLKSYRDLPLRM 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHG+MRVRGFTQDDAH+FCT+ Q+  E      ++   Y+ FGF+ 
Sbjct: 357 AEFGSCHRNEPSGALHGIMRVRGFTQDDAHIFCTESQIQEEVTSCIKMVYDTYQTFGFDN 416

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+VKLSTRPEKRVGSD +WD +E  +K  L+ +       I   +  GEGAFYGPK E+ 
Sbjct: 417 IVVKLSTRPEKRVGSDEIWDQSEEALKQSLEAM------DIAYEIQEGEGAFYGPKIEFT 470

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D + R WQCGT+Q+DFNLP R  A YV+ ++E+  PVMIHRA+ GS+ERFIGI+IE +
Sbjct: 471 LHDCLDRAWQCGTVQLDFNLPGRLGATYVDENNERQTPVMIHRAILGSLERFIGILIEEY 530

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WLSP QA++  IT    +Y QE+A  L+   +  + D RNE I +KIREH++K+
Sbjct: 531 YGFFPTWLSPEQAVIMNITDKQSDYVQEVAQKLQKCGIRAKADLRNEKIGFKIREHTLKR 590

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P +++CGD+E     I +R        K  + D I  +  E
Sbjct: 591 VPFMLVCGDQEMEAGEIAVRTRKGKDLGKFKVDDFISYIQDE 632


>gi|262369846|ref|ZP_06063173.1| threonyl-tRNA synthetase [Acinetobacter johnsonii SH046]
 gi|262314885|gb|EEY95925.1| threonyl-tRNA synthetase [Acinetobacter johnsonii SH046]
          Length = 640

 Score =  680 bits (1754), Expect = 0.0,   Method: Composition-based stats.
 Identities = 301/638 (47%), Positives = 425/638 (66%), Gaps = 15/638 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T P+G  K F    +  DVA SI   LAK  VA  ++G++ D SD +  + S++IITP+
Sbjct: 4   ITLPNGDQKQFDQAVSVMDVALSIGPGLAKNTVAGKVDGRLVDASDLITTDASLQIITPK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   + +IRHSCAH++  AV+ ++PE ++ IGP+IEDGFYYD    +PF+ +++  IE++
Sbjct: 64  DEEGVEIIRHSCAHLVGHAVKQLFPEAKMVIGPVIEDGFYYDIFSAKPFTPEDMLAIEER 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+++I +D   +K+    ++    F ++ E YK+ ++  +P +  + LY   ++ D+CRG
Sbjct: 124 MKKLIDQDYDVIKKMTPRDEVIAEFTARGEDYKLRLIADMPEETEMGLYYHQDYLDMCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +T  +K F KL K++GAYWRGD+    L RIYGTAW  +++L  Y+  +EE+EKRD
Sbjct: 184 PHVPNTKFLKAF-KLTKMSGAYWRGDAKNEQLQRIYGTAWADKKQLAAYIKRIEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHL 304
           HRK+ + +DLFH+ E+  G++FWH  GW I+Q L  YMR+ +  + Y EI TPQV+D  L
Sbjct: 243 HRKIGKALDLFHMQEEAPGMVFWHPNGWTIYQVLEQYMRKVQQDNGYLEIRTPQVVDFTL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGH  +Y   MF       T  + R +A+KPMNCP HV VFN GLKSYR+LP+RLAE
Sbjct: 303 WEKSGHAANYADGMFT------THSESRNYAIKPMNCPCHVQVFNQGLKSYRDLPIRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNEPSGSLHG+MRVRGFTQDDAH+FCTKEQ+  E      L + +YKDFGFE + 
Sbjct: 357 FGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTKEQIGQEVADFIQLTLDVYKDFGFEDVQ 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +KLSTRPEKRVG DALWD AE  +   LD         +   +  GEGAFYGPK E+ LK
Sbjct: 417 MKLSTRPEKRVGDDALWDMAEKSLADALDAAG------LEWELQPGEGAFYGPKIEFSLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D +GR WQCGTIQ DFNLP R +A YV   +++  PVM+HRA+ GS ERFIGI+IE++ G
Sbjct: 471 DCLGRVWQCGTIQCDFNLPERLDASYVTEDNDRDQPVMLHRAILGSFERFIGILIEHYAG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
            +P WL+PIQA V  IT S  E  + +   LK + L   +D RNE I +KIRE ++++IP
Sbjct: 531 FMPPWLTPIQACVMNITDSQAEACESVVAKLKENGLRAISDLRNEKIGFKIRERTLERIP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +++ GD+E  E ++ +R    T    +S+   + ++ 
Sbjct: 591 YLLVLGDREVEEGTVNVRTRSGTNLGTMSIDAFVDLVK 628


>gi|226311191|ref|YP_002771085.1| threonyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
 gi|226094139|dbj|BAH42581.1| threonyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
          Length = 637

 Score =  680 bits (1754), Expect = 0.0,   Method: Composition-based stats.
 Identities = 280/645 (43%), Positives = 428/645 (66%), Gaps = 17/645 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEI 61
           + I +TFPDG+++ +    T  D+A SIS SL KKAVA   +GKV DL   + + + IEI
Sbjct: 2   AQIHVTFPDGAVRQYDAGITIEDIAGSISSSLKKKAVAGKKDGKVVDLYTELTDDAAIEI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWP-EVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           +T +    L V RHS AH++A+AV+ I+  EV+  IGP+IEDGFYYD D     S ++L 
Sbjct: 62  VTLDSADGLEVYRHSTAHLLAQAVKRIYGAEVKFGIGPVIEDGFYYDMDIPVSLSPEDLG 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IE +M++I+  D P  ++ +S E+A  +F+   +  K+E++  +P    +TLY QGE+F
Sbjct: 122 KIEAEMEKIVKEDLPIRRKVVSREEATAIFQELNDHLKLELIRDLPEDATITLYEQGEFF 181

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ STG +K F KLM VAGAYWRG +   +L R+YGTAW  + ++ +YL+F+EE
Sbjct: 182 DLCRGPHLPSTGFIKAF-KLMSVAGAYWRGKAENQVLQRVYGTAWPKKADMDEYLHFIEE 240

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           ++KRDHRKL +E+ LF  +E+  G+ F+  KG+ +   L  + RR +    Y E+ +P +
Sbjct: 241 AKKRDHRKLGKELGLFMFSEEAPGMPFYLPKGFTVRNELEQFSRRLQQLAQYTEVRSPFL 300

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           +++ LW++SGHWD Y+ NM+  +       D  T+ALKPMNCPGH+ ++ + + SYR+LP
Sbjct: 301 MNERLWKESGHWDHYKENMYFSEV------DNATYALKPMNCPGHMLIYKNEMHSYRDLP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R +EFG V+R+E SG+L+G++RVR F QDDAHVF   +Q+ +E   +  LI SIYK FG
Sbjct: 355 IRYSEFGQVHRHEYSGALNGMLRVRTFCQDDAHVFVRPDQIASEIKGMITLIDSIYKVFG 414

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           FE  +  LSTRPE  +GSD LW+ AE+ +K VL+ +  +        +  G+GAFYGPK 
Sbjct: 415 FEYSVA-LSTRPEDSMGSDELWEAAESSLKTVLEELGMA------YEIKDGDGAFYGPKI 467

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           ++ + DA+ R  QCGTIQ+DF +P +F+  YV   +EK  PV++HRA++GS+ERFIGI+I
Sbjct: 468 DFQITDALKRRHQCGTIQLDFQMPEKFDLTYVGQDNEKHRPVVLHRAMYGSMERFIGILI 527

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E++ G  P+WL+PIQA +  I+   + YA+++   L+   + +E D RNE I YKIRE  
Sbjct: 528 EHYAGAFPIWLTPIQARIMNISEVHMPYAEQVREKLQQAGIRVELDGRNEKIGYKIREAQ 587

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           ++KIP +++ G+KE ++ ++ +R+ G      +++   +  +  E
Sbjct: 588 VEKIPYMLVIGEKEVADGTLSVRKRGVGDEGAMTVDAFVEKIRAE 632


>gi|167746735|ref|ZP_02418862.1| hypothetical protein ANACAC_01447 [Anaerostipes caccae DSM 14662]
 gi|167653695|gb|EDR97824.1| hypothetical protein ANACAC_01447 [Anaerostipes caccae DSM 14662]
          Length = 644

 Score =  680 bits (1754), Expect = 0.0,   Method: Composition-based stats.
 Identities = 276/650 (42%), Positives = 406/650 (62%), Gaps = 16/650 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           +K+T  DGS+K +    +  D+A+ IS  LA+ A A  +NG+V DL   + +   + I+T
Sbjct: 1   MKITLKDGSVKEYSQSMSVIDIAKDISEGLARAACAGEVNGEVVDLRTILEDDCELNILT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +        RH+ +HI+A+AV+ ++PE ++AIGP I++GFYYD +K+ PF+ D+L +IE
Sbjct: 61  FDSEGGRHAFRHTASHILAQAVKRLYPETKLAIGPSIDNGFYYDMEKDTPFTQDDLEKIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M++I+             E+A    + + E YKVE++E +P    ++ Y+QGE+ DLC
Sbjct: 121 AEMKKIVKEGLQITCFTKPREEAIAFMKERNEPYKVELIEDLPEDSVISFYQQGEFIDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+ +T  VK F KL  +AGAYWRG+    ML+RIYGTA+  + EL  YL  +EE++K
Sbjct: 181 AGPHLMTTKPVKAF-KLTSLAGAYWRGNEKNQMLTRIYGTAFAKKAELKDYLTMMEEAKK 239

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           RDHRKL +E+ LF + ++G G  F+   G  +  TL+ Y R    K  Y EI++P +L +
Sbjct: 240 RDHRKLGKELGLFMMRDEGPGFPFFLPNGMVLKNTLLDYWREIHNKAGYVEISSPIMLSR 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
           HLW+ SGHWD Y+ NM+       T+ D   FA+KPMNCPG V V+    +SYR+LP+R+
Sbjct: 300 HLWETSGHWDHYQENMYT------TVIDEEDFAIKPMNCPGGVLVYQSEPRSYRDLPLRM 353

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            E G V+R+E SG LHGLMRVR FTQDDAH+F   EQ+ +E   +  LI  +Y  FGF+ 
Sbjct: 354 GELGLVHRHEKSGQLHGLMRVRCFTQDDAHIFMMPEQIKDEIKGVAALIDQVYSLFGFKY 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +GSD  W+ A + ++  LD +       ++  V  G+GAFYGPK ++ 
Sbjct: 414 H-VELSTRPEDSMGSDEDWEMATDSLRSALDDLG------LDYVVNEGDGAFYGPKIDFH 466

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+D+IGR WQCGTIQ+DF LP RF+  Y  +  EK  P+MIHR  FGSIERFIGI+IE+F
Sbjct: 467 LEDSIGRTWQCGTIQLDFQLPLRFDLHYTGADGEKHRPIMIHRVAFGSIERFIGILIEHF 526

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P+Q  V  I+   ++Y  ++ + LK+  +  E D R E + YKIRE  + K
Sbjct: 527 AGAFPTWLAPVQVKVIPISDKHLDYGTKVLDALKAAGIRAEIDTRAEKMGYKIREAQLHK 586

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           IP +++ G KE   +++ +R        ++SL D I  + KE    + ++
Sbjct: 587 IPYMLVVGGKEEENQAVSVRSRFKGDEGQMSLDDFICAIRKEIETKEIRQ 636


>gi|53728893|ref|ZP_00134603.2| COG0441: Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|126207707|ref|YP_001052932.1| threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae L20]
 gi|166223315|sp|A3MYU1|SYT_ACTP2 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|126096499|gb|ABN73327.1| threonyl-tRNA synthetase ThrS [Actinobacillus pleuropneumoniae
           serovar 5b str. L20]
          Length = 643

 Score =  680 bits (1754), Expect = 0.0,   Method: Composition-based stats.
 Identities = 293/641 (45%), Positives = 426/641 (66%), Gaps = 16/641 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS + F    +  +VA+SI   LAK  +A  +NG+  D  D +  + S+EIIT +
Sbjct: 4   ITLPDGSQRQFDNPVSVMEVAQSIGAGLAKATIAGRVNGERRDACDIISEDSSLEIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ ++P V++AIGP I++GFYYD D ++  + ++L  IEK+
Sbjct: 64  DEDGLEIIRHSCAHLLGHAIKQLFPNVKMAIGPTIDNGFYYDVDLDRSLTQEDLDAIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K+ +S ++AR+ FE + E YK+ IL E+I       LY   E+ D+CR
Sbjct: 124 MLELAKTNYDVVKKRVSWQEARDTFEKRGEPYKMAILDENIERTATPALYHHEEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +      F KL KVAGAYWRGDS   ML RIYGTAW  +++L +YL  LEE+ KR
Sbjct: 184 GPHVPNMRFCHHF-KLQKVAGAYWRGDSKNKMLQRIYGTAWADKKQLAEYLTRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHR++ + +DL+H+ E+  G++FWH  GW IF+ L +++R K+K+ DY+E+  P ++D+ 
Sbjct: 243 DHRRIGKALDLYHMQEEAPGLVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW +Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWERTGHWQNYADLMFT------TQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+ +E      ++  IY  FGF  I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQIESEVTSCIRMVYDIYSTFGFSNI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPE R+G DA+WD AE+ +   L        + ++  +  GEGAFYGPK E+ L
Sbjct: 417 QVKLSTRPENRIGDDAMWDRAEDGLAKALTA------NGLSYEIQEGEGAFYGPKIEFAL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D + R+WQCGTIQ+DF LP R +A YV   + +  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 RDCLDREWQCGTIQLDFALPGRLDASYVAEDNGRRTPVMIHRAILGSIERFIGIITEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P QA+V  IT S  +Y Q++   L    + +++D RNE + +K+REH+++++
Sbjct: 531 GFFPTWLAPTQAVVMNITDSQADYVQKVTKALSDAGIRVKSDLRNEKVGFKVREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P +++CGDKE     + +R          ++ + + IL  +
Sbjct: 591 PYMLVCGDKEIEAGKVSVRTRKGADLGTFTIDEFVEILKNQ 631


>gi|89892986|ref|YP_516473.1| threonyl-tRNA synthetase [Desulfitobacterium hafniense Y51]
 gi|89332434|dbj|BAE82029.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 641

 Score =  680 bits (1754), Expect = 0.0,   Method: Composition-based stats.
 Identities = 278/647 (42%), Positives = 414/647 (63%), Gaps = 17/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M   +K+T  DGSI+      +  ++A SISR LAK A+A  +NG+V DLS  + ++  +
Sbjct: 1   MTMMVKITLKDGSIREIESGKSLMELAASISRGLAKAALAGKVNGEVKDLSYALTQDAEV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT +    L ++RHS +H+MAEAV++++P   + IGP I++GFYYDFD E  F+ ++L
Sbjct: 61  EIITADSEEGLKILRHSTSHLMAEAVRNLFPGTILGIGPAIDNGFYYDFDSEHVFTPEDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IE +M+ ++  +  + ++ +S   A + F ++ E YKVE++E +P  E +++Y QG +
Sbjct: 121 EKIEAEMRRLVKENKRYERKEISRSDALQYFSAEGEKYKVELIEDLPEDEVISMYTQGGF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLC GPH+ STG VK F KLM +AGAYWRG     ML RIYGT W  +++L  YL+ LE
Sbjct: 181 TDLCAGPHIPSTGVVKAF-KLMNLAGAYWRGSEKNKMLQRIYGTVWAKKEDLDDYLFKLE 239

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+++RDHRKL  E+DLF + ++G G  F+H KG  +   L  + R++ +   Y EI TP 
Sbjct: 240 EAKRRDHRKLGVELDLFSLHDEGPGFPFFHPKGMVLRNQLEDFWRQEHRKRGYHEIKTPI 299

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L ++LW+ SGHWD Y+ NM+  K       D   FA+KPMNCPG + ++   L+SYR+L
Sbjct: 300 ILSRNLWENSGHWDHYKDNMYTTKI------DDEDFAVKPMNCPGGMIMYKQKLRSYRDL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+ E G V+R+E SG+L+GL+RVR FTQDDAH+F    Q+  E   + +L+   YK F
Sbjct: 354 PLRMGELGLVHRHELSGALNGLLRVRNFTQDDAHIFMLPSQIKAEISGVIDLVDRFYKVF 413

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE   V+LSTRPE  +G+D  W+ A N ++  L+         +N  +  G+GAFYGPK
Sbjct: 414 GFEYH-VELSTRPENSMGADETWEMATNALQEALEA------KGVNYKINPGDGAFYGPK 466

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++ L+D +GR WQCGTIQ+DF +P +F+  Y+    +K  PVMIHR V+GSIERFI ++
Sbjct: 467 IDFHLRDCLGRTWQCGTIQLDFQMPEKFDLTYIGEDGQKHRPVMIHRVVYGSIERFIALL 526

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
            E++ G  P WL+P+Q  V  I+    +YAQ+I   L    +  E D R E I+YKIRE 
Sbjct: 527 TEHYAGAFPTWLAPVQVRVLPISERHEDYAQDIVRRLNDLDIRAEVDERREKISYKIREA 586

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQ-KVSLLDAIPILTKE 644
              KIP  ++ GD+EA   ++ +RR+G      K+S+ + I ++ +E
Sbjct: 587 QTHKIPFALVVGDQEAETDTVAVRRYGQANAGEKLSVAEFIALIQEE 633


>gi|331663198|ref|ZP_08364108.1| threonine--tRNA ligase [Escherichia coli TA143]
 gi|331683225|ref|ZP_08383826.1| threonine--tRNA ligase [Escherichia coli H299]
 gi|331058997|gb|EGI30974.1| threonine--tRNA ligase [Escherichia coli TA143]
 gi|331079440|gb|EGI50637.1| threonine--tRNA ligase [Escherichia coli H299]
          Length = 642

 Score =  679 bits (1753), Expect = 0.0,   Method: Composition-based stats.
 Identities = 300/655 (45%), Positives = 433/655 (66%), Gaps = 19/655 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D  D +  +  +
Sbjct: 1   MPV---ITLPDGSQRHYDHAVSPMDVALDIGPGLAKACIAGRVNGELVDACDLIENDAQL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L +IRHSCAH++  A++ +WP  ++AIGP+I++GFYYD D ++  + +++
Sbjct: 58  SIITAKDEEGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVIDNGFYYDVDLDRTLTQEDV 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M E+  ++   +K+ +S  +ARE F ++ E+YKV IL E+I   +   LY   E
Sbjct: 118 EALEKRMHELAEKNYDVIKKKVSWHEARETFANRGESYKVSILDENIAHDDKPGLYFHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KLMK AGAYWRGDSN  ML RIYGTAW  ++ L  YL  L
Sbjct: 178 YVDMCRGPHVPNMRFCHHF-KLMKTAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF+ L  ++R K+K+  Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRTKLKEYQYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW+++GHW++Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 297 FMMDRVLWEKTGHWENYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+ +E      L+  +Y  
Sbjct: 351 LPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI+VKLSTRPEKR+GSD +WD AE  +   L+      ++ I     LGEGAFYGP
Sbjct: 411 FGFEKIVVKLSTRPEKRIGSDEMWDRAEADLAVALE------ENNIPFEYQLGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF+LPSR +A YV   +E+  PVMIHRA+ GS+ERFIGI
Sbjct: 465 KIEFTLYDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E F G  P WL+P+Q ++  IT S  EY  E+   L +  + ++ D RNE I +KIRE
Sbjct: 525 LTEEFAGFFPTWLAPVQVVIMNITDSQSEYVNELTQKLSNAGIRVKADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           H+++++P +++CGDKE     + +R         + + + I  L +E      ++
Sbjct: 585 HTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSMDVNEVIEKLQQEIRSRSLKQ 639


>gi|149200873|ref|ZP_01877848.1| threonyl-tRNA synthetase [Roseovarius sp. TM1035]
 gi|149145206|gb|EDM33232.1| threonyl-tRNA synthetase [Roseovarius sp. TM1035]
          Length = 648

 Score =  679 bits (1753), Expect = 0.0,   Method: Composition-based stats.
 Identities = 326/652 (50%), Positives = 435/652 (66%), Gaps = 10/652 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
           + I L+FPDG+ + +    T ++VA SIS SLAK+A++  ++G   DL  P+ R+ +I I
Sbjct: 2   AQISLSFPDGNAREYSAGVTPAEVAASISPSLAKRAISAHVDGAHWDLQWPIDRDATISI 61

Query: 62  ITPEDPR-SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            T +D   +L +IRH  AHIMA AVQ IWP+V+V IGP+I +G+YYDFD+  PF+ ++L 
Sbjct: 62  NTIKDDAPALELIRHDLAHIMARAVQEIWPDVKVTIGPVIANGWYYDFDRTAPFTPEDLG 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEKKM+EII    P   +    ++A + +    E YKVE++E+IP  E + +Y  G+W 
Sbjct: 122 LIEKKMKEIINLRDPVRTEIWERDRAIQHYRDTGEPYKVELIEAIPGSEPLRMYWHGDWQ 181

Query: 181 DLCRGPHVRSTGQ-VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           DLCRGPH+++TGQ     FKLM VAGAYWRGDS RPML RIYG A+  +  L  YL FLE
Sbjct: 182 DLCRGPHLQNTGQVPADAFKLMSVAGAYWRGDSTRPMLQRIYGVAFQNRDALKDYLNFLE 241

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQ 298
           E+++RDHRKL REMDLFH+ E+  G +FWH  GW ++ TL  YMRR+ +   Y E+NTPQ
Sbjct: 242 EADRRDHRKLGREMDLFHMQEEAPGQVFWHPNGWTVYTTLQDYMRRQQRRGGYVEVNTPQ 301

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHW+ Y+ NMF V+  +D  ++    ALKPMNCP HV +FN GLKSYR+L
Sbjct: 302 VVDRKLWERSGHWEKYQENMFIVEVDEDHAREKAVNALKPMNCPCHVQIFNQGLKSYRDL 361

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFGS  R EPSG+LHG+MRVRGFTQDDAH+FCT++Q+ +E  +    +  IY D 
Sbjct: 362 PLRMAEFGSCNRYEPSGALHGIMRVRGFTQDDAHIFCTEDQIESETARFITFLSGIYTDL 421

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF    V  STRP+ R GSD +WD AE  +              I   V  GEGAFYGPK
Sbjct: 422 GFPNFEVLFSTRPDVRAGSDEVWDKAEAALLSATRAAG------IEPKVNPGEGAFYGPK 475

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ L DAIGR WQCGT QVDF LP R +A Y+ +   K  PVM+HRAV GS ERFIGI+
Sbjct: 476 LEFTLTDAIGRKWQCGTHQVDFVLPERLDANYIGTDGAKHRPVMLHRAVLGSFERFIGIL 535

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE   G LP WL+P Q +V +I S A +Y  ++A  L   ++  E D RNE INYK+REH
Sbjct: 536 IEEHAGRLPFWLAPRQVVVASIVSEADDYVTKVAQNLTDLNIRAEADTRNEKINYKVREH 595

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDC 650
           S+ K+P+I+ CG +E  + ++ +RR G   ++ V L      L +E+ PPD 
Sbjct: 596 SLGKVPVILACGPREVEDGTVSLRRLGEKDSRIVPLDQVAAELAREATPPDL 647


>gi|170768863|ref|ZP_02903316.1| threonyl-tRNA synthetase [Escherichia albertii TW07627]
 gi|170122411|gb|EDS91342.1| threonyl-tRNA synthetase [Escherichia albertii TW07627]
          Length = 642

 Score =  679 bits (1753), Expect = 0.0,   Method: Composition-based stats.
 Identities = 301/655 (45%), Positives = 432/655 (65%), Gaps = 19/655 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D  D +  +  +
Sbjct: 1   MPV---ITLPDGSQRHYDHAVSPMDVALDIGPGLAKACIAGRVNGELVDACDLIENDAQL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L +IRHSCAH++  A++ +WP  ++AIGP+I++GFYYD D ++  + +++
Sbjct: 58  SIITAKDEEGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVIDNGFYYDVDLDRTLTQEDV 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M E+  ++   +K+ +S  +ARE F  + E+YKV IL E+I   +   LY   E
Sbjct: 118 EALEKRMHELAEKNYDVIKKKVSWHEARETFVKRGESYKVSILDENIAHDDQPGLYFHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KLMK AGAYWRGDSN  ML RIYGTAW  ++ L  YL  L
Sbjct: 178 YVDMCRGPHVPNMRFCHHF-KLMKTAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF+ L  ++R K+K+  Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW+++GHWD+Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 297 FMMDRVLWEKTGHWDNYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+ +E      L+  +Y  
Sbjct: 351 LPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI+VKLSTRPEKR+GSD +WD AE  +   L+      ++ I     LGEGAFYGP
Sbjct: 411 FGFEKIVVKLSTRPEKRIGSDEMWDRAEADLAVALE------ENNIPFEYQLGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF+LPSR +A YV   +E+  PVMIHRA+ GS+ERFIGI
Sbjct: 465 KIEFTLYDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E F G  P WL+P+Q ++  IT S  EY  E+   L +  + ++ D RNE I +KIRE
Sbjct: 525 LTEEFAGFFPTWLAPVQVVIMNITDSQSEYVNELTQKLSNAGIRVKADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           H+++++P +++CGDKE     + +R         + + + I  L +E      ++
Sbjct: 585 HTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSMDVNEVIEKLQQEIRSRSLKQ 639


>gi|269102906|ref|ZP_06155603.1| threonyl-tRNA synthetase [Photobacterium damselae subsp. damselae
           CIP 102761]
 gi|268162804|gb|EEZ41300.1| threonyl-tRNA synthetase [Photobacterium damselae subsp. damselae
           CIP 102761]
          Length = 643

 Score =  679 bits (1753), Expect = 0.0,   Method: Composition-based stats.
 Identities = 307/648 (47%), Positives = 428/648 (66%), Gaps = 20/648 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS + F    +  DVA SI   LAK  +A  ++G   D  D +  + S+
Sbjct: 1   MPV---ITLPDGSQRQFENPVSTMDVALSIGPGLAKATIAGRVDGVRVDACDLIENDASL 57

Query: 60  EIITPEDP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           EIIT +D    L ++RHSCAH++  A++ ++PE ++AIGP I++GFYYD D EQ  + ++
Sbjct: 58  EIITAKDEVDGLEIVRHSCAHLLGHAIKQLYPEAKMAIGPTIDNGFYYDIDLEQSLTQED 117

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQG 177
           L  IEK+M E+       +K+ +S ++AR+ FES+ E YK+EIL E++   +   LY   
Sbjct: 118 LEVIEKRMLELAKTKYQVVKKKVSWQEARDTFESRGETYKIEILDENVARDDRPGLYHHE 177

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           E+ D+CRGPHV   G  + F KL+ VAGAYWRG+S   ML RIYGTA++ ++ L  +L  
Sbjct: 178 EYIDMCRGPHVPHMGFCQNF-KLLSVAGAYWRGNSENKMLQRIYGTAFHDKKALKAHLTR 236

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINT 296
           LEE+ KRDHRK+ +++DLFH+ ++  G++FWH  GW IF+ L  ++R K+ + DY+E+  
Sbjct: 237 LEEAAKRDHRKIGKQLDLFHMQQEAPGMVFWHHNGWTIFRELEVFVREKLNQYDYQEVKG 296

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P ++D+ LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR
Sbjct: 297 PLMMDRVLWERSGHWDKYADAMFT------TSSENREYAIKPMNCPGHVQIFNQGLKSYR 350

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +LP+R+AEFGS +RNEPSGSLHG+MRVRGFTQDDAH+FCT+ Q+  E      ++   YK
Sbjct: 351 DLPLRMAEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTESQVQQEVTSCIEMVYDTYK 410

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
            FGFE I+VKLSTRPEKRVGSDA+WD AE  +   L+++       I   +  GEGAFYG
Sbjct: 411 TFGFENIVVKLSTRPEKRVGSDAMWDKAEADLVTALESM------DIPFEIQEGEGAFYG 464

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK E+ L D + R WQCGT+Q+DF LP R  A YV   +E+  PVMIHRA+ GS+ERFIG
Sbjct: 465 PKIEFTLHDCLDRAWQCGTVQLDFALPERLGATYVGEDNERHTPVMIHRAILGSLERFIG 524

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           I+IE++ G  P WL+P QA+V  IT S  EY QEI   LK   + +  D RNE I +KIR
Sbjct: 525 ILIEDYAGFFPTWLAPQQAVVMNITDSQSEYVQEIVEKLKKCGIRVNADLRNEKIGFKIR 584

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           EH++K++P +++CGD+E     + +R        K  + D +  + +E
Sbjct: 585 EHTLKRVPYMLVCGDQEVEAGEVAVRTRKGKDLGKFKIDDLVAYMQQE 632


>gi|78486008|ref|YP_391933.1| threonyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
 gi|123769059|sp|Q31F14|SYT_THICR RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|78364294|gb|ABB42259.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Thiomicrospira
           crunogena XCL-2]
          Length = 642

 Score =  679 bits (1753), Expect = 0.0,   Method: Composition-based stats.
 Identities = 293/642 (45%), Positives = 426/642 (66%), Gaps = 17/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS + F    T   VA  I   LAK  +A  +NG++ + SD +  +  +++IT +
Sbjct: 4   ITLPDGSKRAFEDAVTVMQVASDIGAGLAKATIAGRVNGQLKEASDLITEDAELQLITLK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L ++RHSCAH++  A++ ++P  ++AIGP++E+GFYYD D E+  + ++L QIEK+
Sbjct: 64  DEDGLHIMRHSCAHLLGHALKQLYPAAKMAIGPVVENGFYYDIDMEEKITPEDLKQIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+E+       +K+     +A   F+ ++E YKVE++E +P +    LY   E+ D+CRG
Sbjct: 124 MKELAKTKYEVIKEMTPRAEALATFKERQEDYKVELIEDMPDETEFGLYHHQEYIDMCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV + G +K F KL  VAGAYWRG+S+  ML RIYG A+  +QEL  YL  +EE+EKRD
Sbjct: 184 PHVPNMGFIKAF-KLTHVAGAYWRGNSDNKMLQRIYGVAFADKQELKDYLRMMEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHL 304
           HRKL + +DLFH+ E   G+ FWH KG  +++ + +YMR+++ + DY+EI TP ++D+ L
Sbjct: 243 HRKLGKSLDLFHVDELAPGMAFWHPKGSTLYRVVENYMRQQLVENDYQEIRTPLIMDRTL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHWD ++ NMF       T  + R +A+KPMNCPGH+ V+NH L SYR+LP+RLAE
Sbjct: 303 WEKSGHWDKFKDNMFT------TETENRDYAVKPMNCPGHIQVYNHNLSSYRDLPIRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FG V+RNEPSG+LHGLMRVR FTQDDAH+FCT EQ+  E     +L+ + Y DFGF+ I 
Sbjct: 357 FGLVHRNEPSGTLHGLMRVRSFTQDDAHIFCTPEQIKEEVQACIDLVFNTYADFGFDNIQ 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           VK STRPE+RVG D +WD AE  ++  L          +   +  GEGAFYGPK E+ LK
Sbjct: 417 VKFSTRPEQRVGEDDVWDLAEEALEQTLKDAN------LEYALQPGEGAFYGPKIEFQLK 470

Query: 485 DAIGRDWQCGTIQVDFN--LPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           D IGR WQCGTIQ+DF+     R NA Y+ + +EK HPVMIHRA+ GS+ERF+GI++E++
Sbjct: 471 DCIGRVWQCGTIQLDFSMTQEERLNAVYIGADNEKHHPVMIHRAILGSLERFVGILVEHY 530

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
           +G  P WL+P Q ++ +I     EY  + A  LK H   +E+D RNE + +KIREH++++
Sbjct: 531 EGKFPTWLAPTQLVIASIADVHNEYVNDFAKKLKKHGFRVESDLRNEKVGFKIREHTLQR 590

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P I++ GD+E    ++ +R  G       S  + I  L+++
Sbjct: 591 VPYILVVGDQEMENGTVNVRARGGENLGSFSFEELIDHLSED 632


>gi|238919782|ref|YP_002933297.1| threonyl-tRNA synthetase [Edwardsiella ictaluri 93-146]
 gi|259516479|sp|C5B846|SYT_EDWI9 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|238869351|gb|ACR69062.1| threonyl-tRNA synthetase, putative [Edwardsiella ictaluri 93-146]
          Length = 642

 Score =  679 bits (1753), Expect = 0.0,   Method: Composition-based stats.
 Identities = 296/647 (45%), Positives = 438/647 (67%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS ++F    +  D+A  I   LAK  +A  +NG++ D  D +  + ++
Sbjct: 1   MPV---ITLPDGSQRHFDHPVSVMDIARDIGPGLAKACIAGRVNGELVDACDLIDADATV 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   + ++RHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D +   + ++L
Sbjct: 58  AIITAKDQEGVDILRHSCAHLLGHAIKQLWPQTKMAIGPVIDNGFYYDVDLDHTLTQEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
            +++K+M E+  +D   +K+ +S ++AR+ F ++ E YKV IL E+I   +   LY   E
Sbjct: 118 ERLDKRMHELAEKDYDVIKKKVSWQEARDAFVARDELYKVAILDENISHDDRPGLYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KL K +GAYWRGDS+  ML RIYGTAW  +++L  YL  L
Sbjct: 178 YLDMCRGPHVPNMRFCHHF-KLQKSSGAYWRGDSDNKMLQRIYGTAWADKKQLNAYLQRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF+ L +++R K+K+  Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEAFVRMKLKEYQYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW+++GHW++Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 297 FMMDRVLWEKTGHWENYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  
Sbjct: 351 LPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDEVNSCIKMVYDMYST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI+VKLSTRPEKR+GSD +WD AE  +   L       ++ I      GEGAFYGP
Sbjct: 411 FGFEKIVVKLSTRPEKRIGSDEIWDRAEEDLAAALQ------ENGIPFEYQPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF+LP R +A YV  ++E+  PVMIHRA+ GS+ERFIGI
Sbjct: 465 KIEFTLHDCLDRAWQCGTVQLDFSLPGRLSASYVGENNERVVPVMIHRAILGSMERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E F G  P WL+P+QA+V  IT S  EY +E++  L++  + +++D RNE I +KIRE
Sbjct: 525 LTEEFAGFFPTWLAPVQAVVMNITDSQAEYVEELSKKLQAAGIRVKSDLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H+++++P +++CGDKE     + +R         +S+ D I  L +E
Sbjct: 585 HTLRRVPYMLVCGDKEVEAGKVAVRTRRGKDLGVMSIDDVIKKLQQE 631


>gi|311279396|ref|YP_003941627.1| threonyl-tRNA synthetase [Enterobacter cloacae SCF1]
 gi|308748591|gb|ADO48343.1| threonyl-tRNA synthetase [Enterobacter cloacae SCF1]
          Length = 642

 Score =  679 bits (1753), Expect = 0.0,   Method: Composition-based stats.
 Identities = 301/655 (45%), Positives = 434/655 (66%), Gaps = 19/655 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D SD +  + S+
Sbjct: 1   MPV---ITLPDGSQRHYDHAVSPMDVALDIGPGLAKACIAGRVNGELADASDLIEHDASL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L ++RHSCAH++  A++ +WP  ++AIGP++++GFYYD D +   + +++
Sbjct: 58  AIITAKDEEGLEILRHSCAHLLGHAIKQLWPNTKMAIGPVVDNGFYYDVDLDHTLTQEDI 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M E+  ++   +K+ +S  +ARE F  + E YKV IL E+I   +   LY   E
Sbjct: 118 DALEKRMHELAEKNYDVIKKNVSWHEARETFVKRGETYKVSILDENIAHDDKPGLYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KLMK AGAYWRGDSN  ML RIYGTAW  ++ L  YL  L
Sbjct: 178 YIDMCRGPHVPNMRFCHHF-KLMKTAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF+ L  ++R K+K+  Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW+++GHWD+Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 297 FMMDRVLWEKTGHWDNYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  
Sbjct: 351 LPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQIRDEVNACIRMVYDMYST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI+VKLSTRPEKR+GSD +WD AE  +   L+      ++ I     LGEGAFYGP
Sbjct: 411 FGFEKIVVKLSTRPEKRIGSDEMWDRAEADLAVALE------ENNIPFEYQLGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF+LPSR +A YV  ++E+  PVMIHRA+ GS+ERFIGI
Sbjct: 465 KIEFTLYDCLDRAWQCGTVQLDFSLPSRLSASYVGENNERQVPVMIHRAILGSMERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E F G  P WL+P+Q +V  IT S  EY  E+   L++  + ++ D RNE I +KIRE
Sbjct: 525 LTEEFAGFFPTWLAPVQVVVMNITDSQSEYVNELTRKLQNAGIRVKADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           H+++++P +++CGDKE     + +R         + + + I  L +E      Q+
Sbjct: 585 HTLRRVPYMLVCGDKEVETGKVAVRTRRGKDLGSMDVNEVIEKLLQEIRSRSLQQ 639


>gi|212711437|ref|ZP_03319565.1| hypothetical protein PROVALCAL_02510 [Providencia alcalifaciens DSM
           30120]
 gi|212685893|gb|EEB45421.1| hypothetical protein PROVALCAL_02510 [Providencia alcalifaciens DSM
           30120]
          Length = 653

 Score =  679 bits (1753), Expect = 0.0,   Method: Composition-based stats.
 Identities = 297/647 (45%), Positives = 426/647 (65%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS + F    +  DVA  I   LAK  +A  +NG++ D  + +  + ++
Sbjct: 12  MPV---ITLPDGSQRQFDHAVSVMDVARDIGAGLAKACIAGRVNGELVDACELIEHDANL 68

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L +IRHSCAH++  A++ +WP  ++AIGP+I++GFYYD D +   + ++L
Sbjct: 69  SIITSKDDEGLEIIRHSCAHLLGHAIKQLWPNTKMAIGPVIDNGFYYDIDLDYTLTQEDL 128

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE-SIPAKENVTLYRQGE 178
            ++EK+M E+   D   +K+ +S  +ARE F S+ E YKVEIL+ +I   +   LY   E
Sbjct: 129 DKLEKRMLELAKTDYDVVKKRVSWAEARETFVSRGEDYKVEILDQNISQDDRPGLYHHQE 188

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KL KVAGAYWRG+S+  ML RIYGTAW  +++L  YL  L
Sbjct: 189 YIDMCRGPHVPNMRFCHHF-KLQKVAGAYWRGNSDNKMLQRIYGTAWADKKQLAAYLLRL 247

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G+ FWH  GW IF+ L +++R K+K  +Y+E+  P
Sbjct: 248 EEAAKRDHRKIGKQLDLYHMQEEAPGMAFWHNDGWTIFRELETFVRTKLKSYNYQEVKGP 307

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW+++GHW++Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 308 FMMDRVLWERTGHWENYKDAMFT------TSSENREYCVKPMNCPGHVQIFNQGLKSYRD 361

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT++Q+  E      +I  +Y  
Sbjct: 362 LPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEDQILGEVTSCIEMIYDVYST 421

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI+VKLSTRPEKR+G+D +WD AE  +   L +        I      GEGAFYGP
Sbjct: 422 FGFEKIVVKLSTRPEKRIGTDDMWDTAEADLANALKS------KGIEFEYQPGEGAFYGP 475

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF LP R NA YV  ++E+  PVMIHRAV GS+ERFIGI
Sbjct: 476 KIEFTLYDCLDRAWQCGTVQLDFFLPGRLNASYVGENNERITPVMIHRAVLGSLERFIGI 535

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E + G  P WL+P Q +V  IT S  +Y QE+ + L+S  +  + D RNE I +KIRE
Sbjct: 536 LTEEYAGFFPTWLAPQQVVVMNITDSQADYVQELVSKLQSVGIRAKADLRNEKIGFKIRE 595

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H+++++P +++CG+KE     + +R         + + +    L +E
Sbjct: 596 HTLRRVPYMLVCGEKEVESGKVSVRTRRGKDLGSLDVNEFTTKLLEE 642


>gi|307245030|ref|ZP_07527126.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
 gi|307253984|ref|ZP_07535834.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9
           str. CVJ13261]
 gi|307258439|ref|ZP_07540179.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           11 str. 56153]
 gi|306854073|gb|EFM86282.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
 gi|306863062|gb|EFM95006.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9
           str. CVJ13261]
 gi|306867501|gb|EFM99349.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           11 str. 56153]
          Length = 643

 Score =  679 bits (1753), Expect = 0.0,   Method: Composition-based stats.
 Identities = 293/641 (45%), Positives = 427/641 (66%), Gaps = 16/641 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS + F    +  +VA+SI   LAK  +A  +NG+  D  D +  + S+EIIT +
Sbjct: 4   ITLPDGSQRQFDNPVSVMEVAQSIGAGLAKATIAGRVNGERRDACDIISEDSSLEIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ ++P+V++AIGP I++GFYYD D ++  + ++L  IEK+
Sbjct: 64  DEDGLEIIRHSCAHLLGHAIKQLFPDVKMAIGPTIDNGFYYDVDLDRSLTQEDLDAIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K+ +S ++AR+ FE + E YK+ IL E+I       LY   E+ D+CR
Sbjct: 124 MLELAKTNYDVVKKRVSWQEARDTFEKRGEPYKMAILDENIERTATPALYHHEEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +      F KL KVAGAYWRGDS   ML RIYGTAW  +++L +YL  LEE+ KR
Sbjct: 184 GPHVPNMRFCHHF-KLQKVAGAYWRGDSKNKMLQRIYGTAWADKKQLAEYLTRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHR++ + +DL+H+ E+  G++FWH  GW IF+ L +++R K+K+ DY+E+  P ++D+ 
Sbjct: 243 DHRRIGKALDLYHMQEEAPGLVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW +Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWERTGHWQNYADLMFT------TQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+ +E      ++  IY  FGF  I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQIESEVTSCIRMVYDIYSTFGFSNI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPE R+G DA+WD AE+ +   L        + ++  +  GEGAFYGPK E+ L
Sbjct: 417 QVKLSTRPENRIGDDAMWDRAEDGLAKALTA------NGLSYEIQEGEGAFYGPKIEFAL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D + R+WQCGTIQ+DF LP R +A YV   + +  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 RDCLDREWQCGTIQLDFALPGRLDASYVAEDNGRRTPVMIHRAILGSIERFIGIITEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P QA+V  IT S  +Y Q++   L    + +++D RNE + +K+REH+++++
Sbjct: 531 GFFPTWLAPTQAVVMNITDSQADYVQKVTKALSDAGIRVKSDLRNEKVGFKVREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P +++CGDKE     + +R          ++ + + IL  +
Sbjct: 591 PYMLVCGDKEIEAGKVSVRTRKGADLGTFTIDEFVEILKNQ 631


>gi|307249432|ref|ZP_07531421.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 4
           str. M62]
 gi|306858506|gb|EFM90573.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 4
           str. M62]
          Length = 643

 Score =  679 bits (1753), Expect = 0.0,   Method: Composition-based stats.
 Identities = 293/641 (45%), Positives = 426/641 (66%), Gaps = 16/641 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS + F    +  +VA+SI   LAK  +A  +NG+  D  D +  + S+EIIT +
Sbjct: 4   ITLPDGSQRQFDNPVSVMEVAQSIGAGLAKATIAGRVNGERRDACDIISEDSSLEIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ ++P+V++AIGP I++GFYYD D ++  + ++L  IEK+
Sbjct: 64  DEDGLEIIRHSCAHLLGHAIKQLFPDVKMAIGPTIDNGFYYDVDLDRSLTQEDLDAIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K+ +S ++AR+ FE + E YK+ IL E+I       LY   E+ D+CR
Sbjct: 124 MLELAKTNYDVVKKSVSWQEARDTFEKRGEPYKMAILDENIERTATPALYHHEEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +      F KL KVAGAYWRGDS   ML RIYGTAW  +++L +YL  LEE+ KR
Sbjct: 184 GPHVPNMRFCHHF-KLQKVAGAYWRGDSKNKMLQRIYGTAWADKKQLAEYLTRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHR++ + +DL+H+ E+  G++FWH  GW IF+ L +++R K+K+ DY+E+  P ++D+ 
Sbjct: 243 DHRRIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW +Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWERTGHWQNYADLMFT------TQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+ +E      ++  IY  FGF  I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQIESEVTSCIRMVYDIYSTFGFSNI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPE R+G DA+WD AE+ +   L        + ++  +  GEGAFYGPK E+ L
Sbjct: 417 QVKLSTRPENRIGDDAMWDRAEDGLAKALTA------NGLSYEIQEGEGAFYGPKIEFAL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D + R+WQCGTIQ+DF LP R +A YV   + +  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 RDCLDREWQCGTIQLDFALPGRLDASYVAEDNGRRTPVMIHRAILGSIERFIGIITEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P QA+V  IT S  +Y Q++   L    +  ++D RNE + +K+REH+++++
Sbjct: 531 GFFPTWLAPTQAVVMNITDSQADYVQKVTKALSDAGIRAKSDLRNEKVGFKVREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P +++CGDKE     + +R          ++ + + IL  +
Sbjct: 591 PYMLVCGDKEIEAGKVSVRTRKGADLGTFTIDEFVEILKNQ 631


>gi|197284912|ref|YP_002150784.1| threonyl-tRNA synthetase [Proteus mirabilis HI4320]
 gi|227355315|ref|ZP_03839716.1| threonyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
 gi|238693141|sp|B4ETK6|SYT_PROMH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|194682399|emb|CAR42252.1| threonyl-tRNA synthetase [Proteus mirabilis HI4320]
 gi|227164539|gb|EEI49410.1| threonyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
          Length = 642

 Score =  679 bits (1753), Expect = 0.0,   Method: Composition-based stats.
 Identities = 294/641 (45%), Positives = 422/641 (65%), Gaps = 16/641 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  DVA  I   LAK  +A  +NG++ D  + +  +  + IIT +
Sbjct: 4   ITLPDGSQRQFENAVSVMDVAADIGPGLAKACIAGRVNGELVDACELIEQDSQLAIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ +WP+ ++AIGP+IE+GFYYD D +   + ++L  +EK+
Sbjct: 64  DDEGLEIIRHSCAHLLGHAIKQLWPQTKMAIGPVIENGFYYDVDLDHSLTQEDLETLEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   D   +K+ ++  +ARE F ++ E YKV IL E+I    +  LY   E+ D+CR
Sbjct: 124 MLELAKTDYDVIKKRVTWAQARETFVARGEDYKVAILDENISQDAHPALYHHQEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +      F KL K+AGAYWRG+S+  ML RIYGTAW  +++L  YL  LEE+ KR
Sbjct: 184 GPHVPNMRFCHHF-KLQKIAGAYWRGNSDNKMLQRIYGTAWADKKQLKAYLERLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G+ FWH  GW IF+ L +++R K+K+ DY+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMAFWHNDGWTIFRELETFVRCKLKEYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW++Y+ NMF       T  + R + +KPMNCPGHV +F  GL+SYR+LP+R+A
Sbjct: 303 LWEKTGHWENYKENMFT------TSSENREYCIKPMNCPGHVQIFKQGLRSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT+EQ+ +E      LI  +Y  FGFEKI
Sbjct: 357 EFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQILSEVNNCIKLIYDVYSTFGFEKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+G DALWD AE  +   L      + + I      GEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEKRIGEDALWDIAETDLAKAL------TDNNIEFEYQPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF+LP R  A YV  ++E+  PVM+HRAV GS+ERFIGI+ E + 
Sbjct: 471 YDCLDRAWQCGTVQLDFSLPGRLGASYVAENNERKVPVMLHRAVLGSLERFIGILTEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P Q +V  IT    +Y Q++   L+   +  + D RNE I +KIREH+++++
Sbjct: 531 GFFPTWLAPQQVVVMNITDGQADYVQKLVKELQDAGIRAKADLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P +++CGDKE     + +R         + + D    L +E
Sbjct: 591 PYMLVCGDKEVESGKVAVRTRRGKDLGSIDVNDFKEKLLQE 631


>gi|82777067|ref|YP_403416.1| threonyl-tRNA synthetase [Shigella dysenteriae Sd197]
 gi|123755748|sp|Q32FI0|SYT_SHIDS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|81241215|gb|ABB61925.1| threonine tRNA synthetase [Shigella dysenteriae Sd197]
          Length = 642

 Score =  679 bits (1753), Expect = 0.0,   Method: Composition-based stats.
 Identities = 300/655 (45%), Positives = 433/655 (66%), Gaps = 19/655 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D  D +  +  +
Sbjct: 1   MPV---ITLPDGSQRHYDHAVSPMDVALDIGPGLAKACIAGRVNGELVDACDLIENDTQL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L +IRHSCAH++  A++ +WP  ++AIGP+I++GFYYD D ++  + +++
Sbjct: 58  SIITAKDEEGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVIDNGFYYDVDLDRTLTQEDV 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M E+  ++   +K+ +S  +ARE F ++ E+YKV IL E+I   +   LY   E
Sbjct: 118 EALEKRMHELAEKNYDVIKKKVSWHEARETFANRGESYKVSILDENIAHDDKPGLYFHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KLMK AGAYWRGDSN  ML RIYGTAW  ++ L  YL  L
Sbjct: 178 YVDMCRGPHVPNMRFCHHF-KLMKTAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF+ L  ++R K+K+  Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW+++GHWD+Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 297 FMMDRVLWEKTGHWDNYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+ +E      L+  +Y  
Sbjct: 351 LPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI+VKLSTRPEKR+GSD +WD AE  +   L+      ++ I     LGEGAFYGP
Sbjct: 411 FGFEKIVVKLSTRPEKRIGSDEMWDRAEADLAVALE------ENNIPFEYQLGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF+LPSR +A YV   +E+  PVMIHRA+ GS+ERFIGI
Sbjct: 465 KIEFTLYDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E F G  P WL+P+Q ++  IT S  +Y  E+   L +  + ++ D RNE I +KIRE
Sbjct: 525 LTEEFAGFFPTWLAPVQVVIMNITDSQSDYVNELTQKLSNAGIRVKADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           H+++++P +++CGDKE     + +R         + + + I  L +E      ++
Sbjct: 585 HTLRRVPYMLVCGDKEVESGKVAVRTRRGKELGSMDVNEVIEKLQQEIRSRSLKQ 639


>gi|319778289|ref|YP_004129202.1| Threonyl-tRNA synthetase [Taylorella equigenitalis MCE9]
 gi|317108313|gb|ADU91059.1| Threonyl-tRNA synthetase [Taylorella equigenitalis MCE9]
          Length = 646

 Score =  679 bits (1753), Expect = 0.0,   Method: Composition-based stats.
 Identities = 316/648 (48%), Positives = 441/648 (68%), Gaps = 21/648 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAIN-----GKVCDLSDPV-REG 57
            I++T PDGS +++    T   +A+SI+ SLAK A+A  +          D S  V  + 
Sbjct: 1   MIQVTLPDGSSRSYETPQTVEQIAQSIAPSLAKAAIAATVKSDTGIETTVDTSYVVDSDV 60

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSD 117
           S+ IITP+D   L +IRHS AH++A AV+ ++P+ QV IGP+I +GFYYDF  ++PF+ +
Sbjct: 61  SLSIITPKDDVGLDIIRHSTAHLLAHAVKELFPDAQVTIGPVINNGFYYDFSYKRPFTPE 120

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +L +IEK+M E++ +D   +++    ++A E F+ + E YK EI+ SIP  E ++LYRQG
Sbjct: 121 DLQKIEKRMSELVKQDIAVIREEWDRDEAIEFFKKEGELYKAEIISSIPQGEVISLYRQG 180

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
            + DLCRGPHV STG++K F KLMKVAGAYWRGDSN  ML R+YGTAW+++ +  +YL  
Sbjct: 181 SFVDLCRGPHVPSTGKLKVF-KLMKVAGAYWRGDSNNEMLQRVYGTAWSSKDDQVKYLTM 239

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
           LEE+EKRDHRKL +E+DLFH  ++  G+IFWH KGW I+Q +  +MR+   +  Y+EI  
Sbjct: 240 LEEAEKRDHRKLGKELDLFHFQDEAPGLIFWHPKGWTIWQQVEQFMRKVYVENGYQEIKA 299

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           PQ+LD  LW+++GHWD+Y+ NMF       T  + R + LKPMNCPGHV ++N  L SYR
Sbjct: 300 PQILDLGLWKKTGHWDNYKENMFT------TQSENREYGLKPMNCPGHVQIYNSTLHSYR 353

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ELP+R  EFG  +RNEPSGSLHG+MRVRGFTQDD H+FCT++Q+  ECL    L+  +YK
Sbjct: 354 ELPIRYGEFGQCHRNEPSGSLHGMMRVRGFTQDDGHIFCTEDQLLAECLAFTALLQKVYK 413

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           +FGF +++ K++TRPEKR+G+D +WD AE  +   L       Q      +  GEGAFYG
Sbjct: 414 EFGFTEVLYKIATRPEKRIGADEIWDKAEKALMESLK------QSGCEFEISPGEGAFYG 467

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK EY LKDAIGR WQCGTIQVDF++P+R  A YV++   +  PVM+HRA+ GS+ERFIG
Sbjct: 468 PKIEYTLKDAIGRHWQCGTIQVDFSMPARLGAEYVDADDTRKTPVMLHRAILGSLERFIG 527

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           ++IEN+ G +P WLSP   +V  I+ +  +YA E+   L      ++ D RNE I  KIR
Sbjct: 528 MLIENYSGAMPPWLSPEHVVVCPISEAFNDYALEVQTKLNQK-FRVKVDLRNEKITKKIR 586

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           E+S++KIP I++ G+KE S  S+ +R  G+     +++ D I  L  E
Sbjct: 587 ENSMQKIPYILVVGEKERSSSSVAVRARGNIDLGVLTVDDFIARLQNE 634


>gi|304397616|ref|ZP_07379493.1| threonyl-tRNA synthetase [Pantoea sp. aB]
 gi|304354788|gb|EFM19158.1| threonyl-tRNA synthetase [Pantoea sp. aB]
          Length = 642

 Score =  679 bits (1753), Expect = 0.0,   Method: Composition-based stats.
 Identities = 289/655 (44%), Positives = 433/655 (66%), Gaps = 19/655 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP    +T PDGS + F    +  D+A  I   LAK  +A  +NG++ D  DP+  + ++
Sbjct: 1   MPV---ITLPDGSQRVFDRPVSVMDIAMDIGPGLAKACIAGRVNGELVDAVDPITEDAAV 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L +IRHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D ++  + +++
Sbjct: 58  AIITAKDEAGLEIIRHSCAHLLGHAIKQLWPDTKMAIGPVIDNGFYYDVDIDRTLTQEDI 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M ++   +   +K+ +S ++AR++F ++ E YK  IL E+I   +   LY   E
Sbjct: 118 DLLEKRMHQLAETNYDVVKKKVSWQEARDVFAARGEIYKTTILDENISHDDKPGLYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KL K++GAYWRGDS+  ML RIYGTAW  +++L  YL  L
Sbjct: 178 YVDMCRGPHVPNMRFCHHF-KLQKISGAYWRGDSSNKMLQRIYGTAWADKKQLAAYLQRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF+ L  ++R K+K+  Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW+++GHW++Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 297 FMMDRVLWEKTGHWENYKEAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSG+LHGLMRVRGFTQDDAHVFCT+EQ+ +E      ++  +Y  
Sbjct: 351 LPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHVFCTEEQVRDEVNSCIRMVYDMYST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI+VKLSTRPEKR+G+D +WD AE  +   L+      ++ I      GEGAFYGP
Sbjct: 411 FGFEKIVVKLSTRPEKRIGTDEMWDRAEEDLAAALN------ENNIEFEFQPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF+LP R  A YV  ++++  PVMIHRA+ GS+ERFIGI
Sbjct: 465 KIEFTLYDCLDRAWQCGTVQLDFSLPKRLEATYVGENNDRQTPVMIHRAILGSMERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E F G  P WL+P+Q +V  IT    EY + +   L++  + ++ D RNE I +KIRE
Sbjct: 525 LTEEFAGFFPTWLAPLQVVVMNITDGQAEYVESLTRKLQNAGIRVKADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           H+++++P +++CGDKE     + +R         + +   +  L +E    + Q+
Sbjct: 585 HTLRRVPYMLVCGDKEVEAGKVAVRTRRGKDLGSMDVDVFVAKLQQEVRSRNLQQ 639


>gi|227111545|ref|ZP_03825201.1| threonyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 642

 Score =  679 bits (1752), Expect = 0.0,   Method: Composition-based stats.
 Identities = 295/647 (45%), Positives = 430/647 (66%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP    +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D SD +  +  +
Sbjct: 1   MPV---ITLPDGSQRHYDHAVSPLDVALDIGPGLAKACIAGRVNGELVDASDKIDTDAQL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L +IRHSCAH++  AV+ +WP+ ++AIGP+I++GFYYD D ++  + +++
Sbjct: 58  AIITAKDEAGLEIIRHSCAHLLGHAVKQLWPDTKMAIGPVIDNGFYYDVDIDRTLTQEDI 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M E+   D   +K+ +S ++AR+ F ++ E YK+ IL E+I   +   LY   E
Sbjct: 118 ELLEKRMHELADTDYDVIKKKVSWQEARDAFAARGETYKMAILDENISRDDRPGLYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KL K +GAYWRGDS   ML RIYGTAW  +++L  YL  L
Sbjct: 178 YIDMCRGPHVPNMRFCHHF-KLQKTSGAYWRGDSKNKMLQRIYGTAWADKKQLASYLQRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF+ L +++R K+K   Y+E+  P
Sbjct: 237 EEASKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEAFVRMKLKSYQYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ +W+++GHW++Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 297 FMMDRVMWEKTGHWENYKEAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  
Sbjct: 351 LPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQVRDEVNSCIKMVYDMYST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI+VKLSTRPEKR+GSD +WD AE  +   L      +++ I      GEGAFYGP
Sbjct: 411 FGFEKIVVKLSTRPEKRIGSDEMWDRAEADLAAAL------TENNIEFAYQPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF+LP R NA YV   +E+  PVMIHRA+ GS+ERFIGI
Sbjct: 465 KIEFTLHDCLDRAWQCGTVQLDFSLPGRLNASYVGESNERQVPVMIHRAILGSMERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E F G  P WL+P+QA++  IT S  +Y  E+   L+   + ++ D RNE I +KIRE
Sbjct: 525 LTEEFAGFFPTWLAPVQAVIINITDSQSDYVNELTRKLQEAGIRVKADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H+++++P +++CGDKE     + +R         + + + I  L +E
Sbjct: 585 HTLRRVPYMLVCGDKEVEAGKVAVRTRRGKDLGSMDVSEVISKLQQE 631


>gi|220934623|ref|YP_002513522.1| threonyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7]
 gi|259516780|sp|B8GRI1|SYT_THISH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|219995933|gb|ACL72535.1| threonyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7]
          Length = 643

 Score =  679 bits (1752), Expect = 0.0,   Method: Composition-based stats.
 Identities = 292/641 (45%), Positives = 419/641 (65%), Gaps = 15/641 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPE 65
           +T PDGS + F    T  DVA  I   LAK A+A  +NG++ D S  + +  S+ IIT  
Sbjct: 4   ITLPDGSERRFDAPVTVRDVAADIGAGLAKAALAGRVNGRLVDTSHLIEDDASLAIITDR 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           DP  L VIRHS AH++A+AV+ ++P  QV IGP+I++GFYYDF  E+PF  D+L +IE +
Sbjct: 64  DPEGLEVIRHSTAHLLAQAVKDLFPSAQVTIGPVIDNGFYYDFAFERPFHPDDLEKIEAR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+E+   D P  +  +  ++A + F  + E YK +I+  IPA E ++LY+QGE+ DLCRG
Sbjct: 124 MKELAKADLPVSRSVMDRDEAVDFFRDQGEEYKAQIIADIPAGETISLYKQGEFIDLCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV STG++K F KL KVAGAYWRGDS+  ML RIYGTAW  +Q+L  YL+ L E+E+RD
Sbjct: 184 PHVPSTGKLKAF-KLTKVAGAYWRGDSSNEMLQRIYGTAWPNKQQLDDYLHRLAEAERRD 242

Query: 246 HRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQH 303
           HR++  E++LF I ED G G++FWH KG +I + +  +      +  Y+ + TP + +  
Sbjct: 243 HRRIGTELNLFSIQEDAGGGLVFWHPKGARIRRAIEQFWFDMHERAGYQFLYTPHIANLD 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+ SGH D Y  +M+     D+     + F LKPMNCP HV V+   L SYR+LP+R A
Sbjct: 303 LWKTSGHADFYSESMYEPMEDDN-----QAFQLKPMNCPFHVLVYKDRLHSYRDLPLRWA 357

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           E G+VYR E SG+LHGLMRVRGFTQDDAH+FC ++Q+  E L+I +L + + + FGF+  
Sbjct: 358 EMGTVYRREMSGALHGLMRVRGFTQDDAHIFCREDQIEAEILRILDLTLEVLQAFGFDDF 417

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            V LSTRP+K VGSD +W+ A   +K  L+      +  ++  V  G GAFYGPK +  +
Sbjct: 418 DVNLSTRPDKAVGSDQIWEHATAALKAALE------KKGLDYSVDEGGGAFYGPKIDIKI 471

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +DAIGR+WQC T+Q+DFNLP RF   YV   + +  P+MIHRA+ GS+ERF G++IE++ 
Sbjct: 472 RDAIGREWQCSTVQLDFNLPERFEMEYVAEDNSRRRPIMIHRALLGSVERFFGVLIEHYA 531

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G+ PLWL+P+Q  V TIT    +YA+E+A+ L++  +  + D RNE I +KIREH+++++
Sbjct: 532 GSFPLWLAPVQVQVLTITDRQDDYAREVADRLRNRGIRADADLRNEKIGFKIREHTLQRV 591

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P +++ GD+E    ++ +R         + L      L  E
Sbjct: 592 PYLLVLGDREMETNTVAVRTRSGEDLGSMDLNQLSERLAGE 632


>gi|153827549|ref|ZP_01980216.1| threonyl-tRNA synthetase [Vibrio cholerae MZO-2]
 gi|153829051|ref|ZP_01981718.1| threonyl-tRNA synthetase [Vibrio cholerae 623-39]
 gi|229514759|ref|ZP_04404220.1| threonyl-tRNA synthetase [Vibrio cholerae TMA 21]
 gi|229522960|ref|ZP_04412374.1| threonyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
 gi|229526102|ref|ZP_04415506.1| threonyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
 gi|229527753|ref|ZP_04417144.1| threonyl-tRNA synthetase [Vibrio cholerae 12129(1)]
 gi|254284959|ref|ZP_04959925.1| threonyl-tRNA synthetase [Vibrio cholerae AM-19226]
 gi|148875480|gb|EDL73615.1| threonyl-tRNA synthetase [Vibrio cholerae 623-39]
 gi|149738482|gb|EDM52878.1| threonyl-tRNA synthetase [Vibrio cholerae MZO-2]
 gi|150424962|gb|EDN16739.1| threonyl-tRNA synthetase [Vibrio cholerae AM-19226]
 gi|229334115|gb|EEN99600.1| threonyl-tRNA synthetase [Vibrio cholerae 12129(1)]
 gi|229336260|gb|EEO01278.1| threonyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
 gi|229340177|gb|EEO05185.1| threonyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
 gi|229348739|gb|EEO13697.1| threonyl-tRNA synthetase [Vibrio cholerae TMA 21]
 gi|327485485|gb|AEA79891.1| Threonyl-tRNA synthetase [Vibrio cholerae LMA3894-4]
 gi|327485490|gb|AEA79896.1| Threonyl-tRNA synthetase [Vibrio cholerae LMA3894-4]
          Length = 642

 Score =  679 bits (1752), Expect = 0.0,   Method: Composition-based stats.
 Identities = 298/642 (46%), Positives = 425/642 (66%), Gaps = 17/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS ++F    +  +VA+SI   LAK  +A  +NG   D  D +  + S+EIIT +
Sbjct: 4   ITLPDGSQRHFDNPVSTLEVAQSIGPGLAKATIAGRVNGVRVDACDLIEHDASLEIITTK 63

Query: 66  DP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  A++ ++P  ++AIGP I+ GFYYD D EQ  S ++L +IE 
Sbjct: 64  DEVDGLEIVRHSCAHLLGHALKQLYPNAKMAIGPTIDSGFYYDIDLEQSLSQEDLEKIEA 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLC 183
           +M E+       +K+ +S ++AR+ FES+ E+YK+EIL E++   +   LY   E+ D+C
Sbjct: 124 RMVELAKTKYAVVKKKVSWQEARDTFESRGESYKMEILDENVARDDRPGLYHHEEYIDMC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV   G  + F KL+ +AGAYWRG+S+  ML RIYGTA++ ++ L  +L  LEE+ K
Sbjct: 184 RGPHVPHMGFCQNF-KLLNIAGAYWRGNSDNKMLQRIYGTAFHDKKALQAHLTRLEEAAK 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRK+ +++DLFH+ ++  G++FWH  GW IF+ L  ++R+K+ +  Y+E+  P ++D+
Sbjct: 243 RDHRKIGKQLDLFHMQQEAPGMVFWHHNGWSIFRDLEIFIRQKLNEYGYQEVKGPLMMDR 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y   MF       T  + R +A+KPMNCPGH+ +FN GLKSYR+LP+R+
Sbjct: 303 VLWERSGHWDKYADAMFT------TSSENREYAIKPMNCPGHIQIFNQGLKSYRDLPLRM 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSGSLHG+MRVRGFTQDDAH+FCT++Q+  E      ++   Y  FGF+ 
Sbjct: 357 AEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTEDQIQQEVTSCIKMVYDTYTTFGFQN 416

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+VKLSTRPEKRVGSD +WD +E  +   L  +       I   +  GEGAFYGPK E+ 
Sbjct: 417 IVVKLSTRPEKRVGSDEIWDKSEQALIDSLKAM------DIPFEIQEGEGAFYGPKIEFT 470

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D + R WQCGT+Q+DFNLP+R  A YV   +E+  PVMIHRA+ GS+ERFIGI+IE +
Sbjct: 471 LYDCLDRAWQCGTVQLDFNLPTRLGATYVGESNERLIPVMIHRAILGSLERFIGILIEEY 530

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P QA+V  IT    +YA E+A  L+   +  + D RNE I +KIREH++K+
Sbjct: 531 AGFFPTWLAPEQAVVVNITDKQADYAHEVAQKLQKCGIRAKADLRNEKIGFKIREHTLKR 590

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P +++CGD+E     I +R        K  L D I  +  E
Sbjct: 591 VPYMLVCGDQEMEAGEIAVRTRKGKDLGKFKLDDFIAHIQAE 632


>gi|262403446|ref|ZP_06080004.1| threonyl-tRNA synthetase [Vibrio sp. RC586]
 gi|262349950|gb|EEY99085.1| threonyl-tRNA synthetase [Vibrio sp. RC586]
          Length = 642

 Score =  679 bits (1752), Expect = 0.0,   Method: Composition-based stats.
 Identities = 298/642 (46%), Positives = 426/642 (66%), Gaps = 17/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS ++F    +  +VA+SI   LAK  +A  +NG   D  D +  + S+EIIT +
Sbjct: 4   ITLPDGSQRHFDNPVSTLEVAQSIGPGLAKATIAGRVNGARVDACDLIEHDASLEIITTK 63

Query: 66  DP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  A++ ++P  ++AIGP I+ GFYYD D EQ  S D+L +IE 
Sbjct: 64  DEVDGLEIVRHSCAHLLGHALKQLYPNAKMAIGPTIDSGFYYDIDLEQSLSQDDLEKIEA 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLC 183
           +M E+       +K+ +S ++AR+ FES+ E+YK+EIL E++   +   LY   E+ D+C
Sbjct: 124 RMVELAKTKYAVVKKKVSWQEARDTFESRGESYKIEILDENVARDDRPGLYHHEEYIDMC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV   G  + F KL+ +AGAYWRG+S+  ML RIYGTA++ ++ L  +L  LEE+ K
Sbjct: 184 RGPHVPHMGFCQNF-KLLNIAGAYWRGNSDNKMLQRIYGTAFHDKKALQAHLTRLEEAAK 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRK+ +++DLFH+ ++  G++FWH  GW +F+ L  ++R+K+ +  Y+E+  P ++D+
Sbjct: 243 RDHRKIGKQLDLFHMQQEAPGMVFWHHNGWSVFRDLEIFIRQKLNEYGYQEVKGPLMMDR 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y   MF       T  + R +A+KPMNCPGH+ +FN GLKSYR+LP+R+
Sbjct: 303 VLWERSGHWDKYADAMFT------TSSENREYAIKPMNCPGHIQIFNQGLKSYRDLPLRM 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSGSLHG+MRVRGFTQDDAH+FCT++Q+  E      ++   Y  FGF+ 
Sbjct: 357 AEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTEDQIQQEVTSCIKMVYDTYTTFGFQN 416

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+VKLSTRPEKRVGSD +WD +E  +   L  ++      I   +  GEGAFYGPK E+ 
Sbjct: 417 IVVKLSTRPEKRVGSDEIWDKSEQALIDSLKAME------IPFEIQEGEGAFYGPKIEFT 470

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D + R WQCGT+Q+DFNLP+R  A YV   +E+  PVMIHRA+ GS+ERFIGI+IE +
Sbjct: 471 LYDCLDRAWQCGTVQLDFNLPTRLGATYVGESNERLIPVMIHRAILGSLERFIGILIEEY 530

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P QA+V  IT    +YA E+A  L+   +  + D RNE I +KIREH++K+
Sbjct: 531 AGFFPTWLAPEQAVVVNITDKQADYAHEVAQKLQKCGIRAKADLRNEKIGFKIREHTLKR 590

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P +++CGD+E     I +R        K  L D I  +  E
Sbjct: 591 VPYMLVCGDQEMEAGEIAVRTRKGKDLGKFKLDDFIKHIQAE 632


>gi|153855829|ref|ZP_01996815.1| hypothetical protein DORLON_02836 [Dorea longicatena DSM 13814]
 gi|149751870|gb|EDM61801.1| hypothetical protein DORLON_02836 [Dorea longicatena DSM 13814]
          Length = 645

 Score =  679 bits (1752), Expect = 0.0,   Method: Composition-based stats.
 Identities = 276/642 (42%), Positives = 405/642 (63%), Gaps = 16/642 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K+T  DGS K +    +  D+ + IS  LA+ A +  +NG+V DL   V  +  +EI+T
Sbjct: 4   MKITLKDGSFKEYEGSMSVLDITKDISEGLARVATSARVNGEVVDLRHVVSEDCELEILT 63

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            ++        H+ +HIMA+A++ ++P+ ++AIGP IE+GFYYD D+E PF +++L +IE
Sbjct: 64  FDNEEGKGAFWHTTSHIMAQAIKRLYPDTKLAIGPSIENGFYYDVDRETPFVAEDLEKIE 123

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M++I+    P  +   + E+A   F+ K E YKVE++E +P  E ++ Y+QGE+ DLC
Sbjct: 124 KEMKKIVKEALPIERFTKTREEAIAYFKEKDEPYKVELIEDLPEGEEISFYQQGEFVDLC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+ +T  VK F KL  +AGAYWRG     ML+RIYG ++  +  L +YL  LEE+++
Sbjct: 184 AGPHLMTTKPVKAF-KLTSLAGAYWRGSEKNKMLTRIYGISYPKKALLDEYLTMLEEAKR 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           RDHRKL +E+ LF + E+G G  F+  KG  +  TL+ Y R    K  Y E++TP +L +
Sbjct: 243 RDHRKLGKELGLFMMCEEGPGFPFFLPKGMVLKNTLLDYWRELHKKAGYVEVSTPIILSR 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
           HLW+ SGHWD Y+ NM+  +       D   FA+KPMNCPG + V+    +SY++LP+R+
Sbjct: 303 HLWETSGHWDHYKENMYTTQI------DGEDFAIKPMNCPGGMLVYKAEPRSYKDLPLRV 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            E G V+R+E SG LHGLMRVR FTQDDAH+F   EQ+ +E   +  LI  +Y+ FGF+ 
Sbjct: 357 GELGLVHRHEKSGQLHGLMRVRCFTQDDAHIFMMPEQIRDEIKGVVALIDEVYQLFGFKY 416

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +GSD  W+ A   ++G L+ +       ++  V  G+GAFYGPK ++ 
Sbjct: 417 H-VELSTRPEDSMGSDEDWELATEGLRGALNDLG------LDYVVNEGDGAFYGPKIDFH 469

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D+IGR WQCGTIQ+D  LP RF   Y  +  EK  P+MIHR  FGSIERFIGI+IE+F
Sbjct: 470 LTDSIGRTWQCGTIQLDMQLPQRFELEYTGADGEKHRPIMIHRVAFGSIERFIGILIEHF 529

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P+Q  V  I+   +EY Q++ + L +  +  E D R E I YKIRE  ++K
Sbjct: 530 AGAFPTWLAPVQVKVLPISDKHLEYGQKVLDTLNAAGIRAEIDTRAEKIGYKIREAQMQK 589

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IP +++ G KE  E  + +R   +    + SL + +  +T+E
Sbjct: 590 IPYMLVVGAKEEEENLVSVRSRFAGDEGQKSLDEFVASVTEE 631


>gi|260551943|ref|ZP_05825805.1| threonyl-tRNA synthetase [Acinetobacter sp. RUH2624]
 gi|260405346|gb|EEW98841.1| threonyl-tRNA synthetase [Acinetobacter sp. RUH2624]
          Length = 640

 Score =  679 bits (1752), Expect = 0.0,   Method: Composition-based stats.
 Identities = 301/638 (47%), Positives = 430/638 (67%), Gaps = 15/638 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T P+G  KNF    +  +VA+SI   LAK  VA  +N ++ D  D +  + +++IITP+
Sbjct: 4   ITLPNGDQKNFDHPVSVMEVAQSIGPGLAKNTVAGRVNDRLVDACDLITEDSTLQIITPK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  AV+ ++PE ++ IGP+IE+GFYYD    +PF+ D++A IE++
Sbjct: 64  DEEGLEIIRHSCAHLVGHAVKQLFPEAKMVIGPVIEEGFYYDIWMPRPFTLDDMAAIEER 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+++I +D   +K+    ++    F ++ E YK+ ++  +P +  + LY   ++ D+CRG
Sbjct: 124 MKKLIDQDYDVVKKMTPRDEVIAEFTARGEEYKLRLIADMPEETQMGLYYHQDYLDMCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +T  +K F KL K++GAYWRGD+    L RIYGTAW  +++L  Y+  +EE+EKRD
Sbjct: 184 PHVPNTKFLKSF-KLTKISGAYWRGDAKNEQLQRIYGTAWADKKQLAAYIKRIEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHL 304
           HRK+ + +DLFH+ E+  G++FWH  GW I+Q L  YMR+ +  + Y+EI TPQ++D  L
Sbjct: 243 HRKIGKALDLFHMQEEAPGMVFWHANGWTIYQVLEQYMRKVQQDNGYQEIKTPQIVDFTL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGH  +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYR+LP+RLAE
Sbjct: 303 WEKSGHAANYAENMFT------THSESRNYAVKPMNCPCHVQVFNQGLKSYRDLPIRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNEPSGSLHG+MRVRGFTQDDAH+FCTKEQ+  E      L + +YKDFGFE++ 
Sbjct: 357 FGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTKEQIGKEVADFIQLTLDVYKDFGFEEVQ 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +KLSTRPEKRVG DALWD AE  +   LD         +   +  GEGAFYGPK E+ LK
Sbjct: 417 MKLSTRPEKRVGDDALWDLAEKSLADALDAAG------LKWELQPGEGAFYGPKIEFSLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D +GR WQCGTIQ DFNLP R +A YV   +E+  PVM+HRA+ GS ERFIGI+IE++ G
Sbjct: 471 DCLGRVWQCGTIQCDFNLPVRLDASYVTEENERDQPVMLHRAILGSFERFIGILIEHYAG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
            +P WLSP+QA V  IT +  E ++++   LK + L   +D RNE I +KIRE ++++IP
Sbjct: 531 FMPPWLSPVQACVMNITDAQAEASEQVVAKLKENGLRAISDLRNEKIGFKIRERTLERIP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +++ GD+E  E ++ +R         +S+   I ++ 
Sbjct: 591 YLLVLGDREVEEGTVNVRTRSGKNLGTMSVDAFIDLVK 628


>gi|167648480|ref|YP_001686143.1| threonyl-tRNA synthetase [Caulobacter sp. K31]
 gi|189083602|sp|B0T0Z7|SYT_CAUSK RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|167350910|gb|ABZ73645.1| threonyl-tRNA synthetase [Caulobacter sp. K31]
          Length = 659

 Score =  679 bits (1752), Expect = 0.0,   Method: Composition-based stats.
 Identities = 328/657 (49%), Positives = 442/657 (67%), Gaps = 19/657 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI---- 59
            I L FPDGS + +   +TG DVA SIS+SL KKA+ + ++GK+ DL  P+    +    
Sbjct: 1   MIDLIFPDGSARQYADGSTGRDVAASISKSLEKKALLIKLDGKLLDLDRPLTPDLLGGGN 60

Query: 60  --EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSD 117
             EIIT + P +L VIRH  AH++AEAVQ ++P  QV IGP +EDGFYYDF +++PFS D
Sbjct: 61  RFEIITRDSPDALEVIRHDTAHVLAEAVQELFPGTQVTIGPNVEDGFYYDFARDEPFSLD 120

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +L +IE++M++I+ RD    ++ +  + A   FE+  E+YK +I+  +PA + +T+Y QG
Sbjct: 121 DLPKIEERMRQIVDRDEKIRREEVDRDAAIADFEAMGESYKAQIIRDLPASDTITVYHQG 180

Query: 178 E-WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           E W DLCRGPH+ ST  V K FKL K+AGAYWRGD N   L RIYGT+W T+ +L  +L 
Sbjct: 181 EKWKDLCRGPHLPSTKAVGKAFKLTKLAGAYWRGDQNNAQLQRIYGTSWATEADLEAHLK 240

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
            +EE+E+RDHRKL + MDLFHI E+G G++FWH KGW ++  L +YMRR++    Y E+ 
Sbjct: 241 RIEEAERRDHRKLGKTMDLFHIQEEGKGMVFWHPKGWTLYLALEAYMRRRLDAAGYREVK 300

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TPQ+LD+ LW++SGH + +   MF  + A     +    A+KPMNCPGH+ +FN G KSY
Sbjct: 301 TPQILDKSLWERSGHAEKFGHAMFMCESA-----EGEVLAVKPMNCPGHIQIFNVGQKSY 355

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP+R+AEFG+ +R EPSG++HG+MRVR FTQDDAH+FC +EQ+  E  +   L+ S+Y
Sbjct: 356 RELPLRMAEFGACHRYEPSGAMHGIMRVRAFTQDDAHIFCREEQVTEESARFIELLRSVY 415

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
            D G      K STRPE R G DA+WD      K        +        +  GEGAFY
Sbjct: 416 SDLGMHLADTKFSTRPELRAGEDAVWD------KAEAALSAAAEAAGETLVLQEGEGAFY 469

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK E+ LKDAIGR WQCGT+Q+DF LP R +A YV     K  PVM+HRA+ GS ERFI
Sbjct: 470 GPKLEFSLKDAIGRVWQCGTLQLDFVLPERLDAEYVAEDGSKKRPVMLHRAILGSFERFI 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
           GI++EN+ G+LPLWL+P+Q +V TITS A +YAQ +A  L S  +  E DFRNE INYKI
Sbjct: 530 GILLENYAGHLPLWLAPVQVVVATITSDADDYAQRVAERLTSMGIRAEVDFRNEKINYKI 589

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           REHS+ K+P+I + G KEA    + +RR G    + +SL DA+  LT+E+ PPD  +
Sbjct: 590 REHSLAKVPVIAVVGRKEAENGEVALRRLGGEGQKVLSLEDAVRALTEEATPPDLAR 646


>gi|82543879|ref|YP_407826.1| threonyl-tRNA synthetase [Shigella boydii Sb227]
 gi|187734126|ref|YP_001880509.1| threonyl-tRNA synthetase [Shigella boydii CDC 3083-94]
 gi|123769450|sp|Q321L0|SYT_SHIBS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|238689503|sp|B2U397|SYT_SHIB3 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|81245290|gb|ABB65998.1| threonine tRNA synthetase [Shigella boydii Sb227]
 gi|187431118|gb|ACD10392.1| threonyl-tRNA synthetase [Shigella boydii CDC 3083-94]
          Length = 642

 Score =  679 bits (1752), Expect = 0.0,   Method: Composition-based stats.
 Identities = 301/655 (45%), Positives = 432/655 (65%), Gaps = 19/655 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D  D +  +  +
Sbjct: 1   MPV---ITLPDGSQRHYDHAVSPMDVALDIGPGLAKACIAGRVNGELVDACDLIENDAQL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L +IRHSCAH++  A++ +WP  ++AIGP+I++GFYYD D ++  + +++
Sbjct: 58  SIITAKDEEGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVIDNGFYYDVDLDRTLTQEDV 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M E+  ++   +K+ +S   ARE F ++ E+YKV IL E+I   +   LY   E
Sbjct: 118 EALEKRMHELAEKNYDVIKKKVSWHAARETFANRGESYKVSILDENIAHDDKPGLYFHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KLMK AGAYWRGDSN  ML RIYGTAW  ++ L  YL  L
Sbjct: 178 YVDMCRGPHVPNMRFCHHF-KLMKTAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF+ L  ++R K+K+  Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW+++GHWD+Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 297 FMMDRVLWEKTGHWDNYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+ +E      L+  +Y  
Sbjct: 351 LPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI+VKLSTRPEKR+GSD +WD AE  +   L+      ++ I     LGEGAFYGP
Sbjct: 411 FGFEKIVVKLSTRPEKRIGSDEMWDRAEADLAVALE------ENNIPFEYQLGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF+LPSR +A YV   +E+  PVMIHRA+ GS+ERFIGI
Sbjct: 465 KIEFTLYDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E F G  P WL+P+Q ++  IT S  EY  E+   L +  + ++ D RNE I +KIRE
Sbjct: 525 LTEEFAGFFPTWLAPVQVVIMNITDSQSEYVNELTQKLSNAGIRVKADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           H+++++P +++CGDKE     + +R         + + + I  L +E      ++
Sbjct: 585 HTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSMDVNEVIEKLQQEIRSRSLKQ 639


>gi|291617247|ref|YP_003519989.1| ThrS [Pantoea ananatis LMG 20103]
 gi|291152277|gb|ADD76861.1| ThrS [Pantoea ananatis LMG 20103]
          Length = 642

 Score =  679 bits (1752), Expect = 0.0,   Method: Composition-based stats.
 Identities = 288/647 (44%), Positives = 431/647 (66%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SI 59
           MP    +T PDGS +++    +  D+A  I   LAK  +A  +NG++ D  DP+ +  S+
Sbjct: 1   MPV---ITLPDGSQRSYDRPVSVMDIALDIGPGLAKACIAGRVNGELVDAVDPITDDASV 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L +IRHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D ++  + +++
Sbjct: 58  AIITAKDEAGLEIIRHSCAHLLGHAIKQLWPDTKMAIGPVIDNGFYYDVDIDRTLTQEDI 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M ++   +   +K+ +S ++AR++F ++ E YK  IL E+I   +   LY   E
Sbjct: 118 ELLEKRMHQLAETNYDVVKKKVSWQEARDVFAARGEVYKTTILDENISHDDRPGLYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KL K++GAYWRGDS+  ML RIYGTAW  +++L  YL  L
Sbjct: 178 YVDMCRGPHVPNMRFCHHF-KLQKISGAYWRGDSDNKMLQRIYGTAWADKKQLAAYLQRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF+ L  ++R K+K+  Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW+++GHW++Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 297 FMMDRVLWEKTGHWENYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT++Q+  E      ++  +Y  
Sbjct: 351 LPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEDQLRTEVNSCIRMVYDMYST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI+VKLSTRPEKR+GSD  WD AE  +   L+      ++ I      GEGAFYGP
Sbjct: 411 FGFEKILVKLSTRPEKRIGSDETWDRAEEDLAAALN------ENNIEFEYQPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF+LP R +A YV  ++++  PVMIHRA+ GS+ERFIGI
Sbjct: 465 KIEFTLYDCLDRAWQCGTVQLDFSLPKRLDATYVGENNDRQTPVMIHRAILGSMERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E F G  P WL+P+QA+V  IT    EY + +   L++  + ++ D RNE I +KIRE
Sbjct: 525 LTEEFAGFFPSWLAPMQAVVMNITDGQAEYVETLTRKLQNAGIRVKADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H+++++P +++CGDKE     + +R         + +   +  L +E
Sbjct: 585 HTLRRVPYMLVCGDKEVEAGKVAVRTRRGKDLGSMDVDVFVEKLQQE 631


>gi|218548710|ref|YP_002382501.1| threonyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
 gi|226701412|sp|B7LQ71|SYT_ESCF3 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|218356251|emb|CAQ88868.1| threonyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
 gi|324113470|gb|EGC07445.1| threonyl-tRNA synthetase [Escherichia fergusonii B253]
          Length = 642

 Score =  679 bits (1751), Expect = 0.0,   Method: Composition-based stats.
 Identities = 300/655 (45%), Positives = 432/655 (65%), Gaps = 19/655 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D  D +  +  +
Sbjct: 1   MPV---ITLPDGSQRHYDHAVSPMDVALDIGPGLAKACIAGRVNGELVDACDLIENDAQL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L +IRHSCAH++  A++ +WP  ++AIGP+I++GFYYD D ++  + +++
Sbjct: 58  AIITAKDEEGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVIDNGFYYDVDLDRTLTQEDV 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M E+  ++   +K+ +S  +ARE F  + E+YKV IL E+I   +   LY   E
Sbjct: 118 EALEKRMHELAEKNYDVIKKKVSWHEARETFVKRGESYKVSILDENIAHDDQPGLYFHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KLMK AGAYWRGDSN  ML RIYGTAW  ++ L  YL  L
Sbjct: 178 YVDMCRGPHVPNMRFCHHF-KLMKTAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF+ L  ++R K+K+  Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRTKLKEYQYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW+++GHW++Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 297 FMMDRVLWEKTGHWENYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+ +E      L+  +Y  
Sbjct: 351 LPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI+VKLSTRPEKR+GSD +WD AE  +   L+      ++ I     LGEGAFYGP
Sbjct: 411 FGFEKIVVKLSTRPEKRIGSDEMWDRAEADLAVALE------ENNIPFEYQLGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF+LPSR +A YV   +E+  PVMIHRA+ GS+ERFIGI
Sbjct: 465 KIEFTLYDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E F G  P WL+P+Q ++  IT S  EY  E+   L +  + ++ D RNE I +KIRE
Sbjct: 525 LTEEFAGFFPTWLAPVQVVIMNITDSQSEYVNELTQKLSNAGIRVKADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           H+++++P +++CGDKE     + +R         + + + I  L +E      ++
Sbjct: 585 HTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSMDVNEVIEKLQQEIRSRSLKQ 639


>gi|15802131|ref|NP_288153.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 EDL933]
 gi|15831680|ref|NP_310453.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
 gi|168762217|ref|ZP_02787224.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4501]
 gi|168788115|ref|ZP_02813122.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC869]
 gi|168800100|ref|ZP_02825107.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC508]
 gi|187776029|ref|ZP_02799987.2| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4196]
 gi|188024843|ref|ZP_02774486.2| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4113]
 gi|189010441|ref|ZP_02807141.2| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4076]
 gi|189402338|ref|ZP_02781727.2| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4401]
 gi|189403439|ref|ZP_02795487.2| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4486]
 gi|208810744|ref|ZP_03252620.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4206]
 gi|208816647|ref|ZP_03257767.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4045]
 gi|209400429|ref|YP_002270789.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4115]
 gi|217328990|ref|ZP_03445071.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14588]
 gi|254793336|ref|YP_003078173.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
 gi|291282899|ref|YP_003499717.1| Threonyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
 gi|22654116|sp|Q8XE27|SYT_ECO57 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|238065112|sp|B5YQ07|SYT_ECO5E RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|12515733|gb|AAG56706.1|AE005395_2 threonine tRNA synthetase [Escherichia coli O157:H7 str. EDL933]
 gi|13361893|dbj|BAB35849.1| threonine tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
 gi|187769425|gb|EDU33269.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4196]
 gi|188016225|gb|EDU54347.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4113]
 gi|189000290|gb|EDU69276.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4076]
 gi|189356196|gb|EDU74615.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4401]
 gi|189360618|gb|EDU79037.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4486]
 gi|189367509|gb|EDU85925.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4501]
 gi|189372060|gb|EDU90476.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC869]
 gi|189377572|gb|EDU95988.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC508]
 gi|208725260|gb|EDZ74967.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4206]
 gi|208730990|gb|EDZ79679.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4045]
 gi|209161829|gb|ACI39262.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4115]
 gi|209768828|gb|ACI82726.1| threonine tRNA synthetase [Escherichia coli]
 gi|209768830|gb|ACI82727.1| threonine tRNA synthetase [Escherichia coli]
 gi|209768832|gb|ACI82728.1| threonine tRNA synthetase [Escherichia coli]
 gi|209768834|gb|ACI82729.1| threonine tRNA synthetase [Escherichia coli]
 gi|209768836|gb|ACI82730.1| threonine tRNA synthetase [Escherichia coli]
 gi|217318337|gb|EEC26764.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14588]
 gi|254592736|gb|ACT72097.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
 gi|290762772|gb|ADD56733.1| Threonyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
 gi|320188406|gb|EFW63068.1| Threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC1212]
 gi|320652208|gb|EFX20506.1| threonyl-tRNA synthetase [Escherichia coli O157:H- str. H 2687]
 gi|320657809|gb|EFX25571.1| threonyl-tRNA synthetase [Escherichia coli O55:H7 str. 3256-97 TW
           07815]
 gi|320658384|gb|EFX26078.1| threonyl-tRNA synthetase [Escherichia coli O55:H7 str. USDA 5905]
 gi|326342086|gb|EGD65867.1| Threonyl-tRNA synthetase [Escherichia coli O157:H7 str. 1044]
 gi|326343638|gb|EGD67400.1| Threonyl-tRNA synthetase [Escherichia coli O157:H7 str. 1125]
          Length = 642

 Score =  679 bits (1751), Expect = 0.0,   Method: Composition-based stats.
 Identities = 302/655 (46%), Positives = 433/655 (66%), Gaps = 19/655 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D  D +  +  +
Sbjct: 1   MPV---ITLPDGSQRHYDHAVSPMDVALDIGPGLAKACIAGRVNGELVDACDLIENDAQL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L +IRHSCAH++  A++ +WP  ++AIGP+I++GFYYD D ++  + +++
Sbjct: 58  SIITAKDEEGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVIDNGFYYDVDLDRTLTQEDV 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M E+  ++   +K+ +S  +ARE F ++ E+YKV IL E+I   +   LY   E
Sbjct: 118 EALEKRMHELAEKNYDVIKKKVSWHEARETFANRGESYKVSILDENIAHDDKPGLYFHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KLMK AGAYWRGDSN  ML RIYGTAW  ++ L  YL  L
Sbjct: 178 YVDMCRGPHVPNMRFCHHF-KLMKTAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF+ L  ++R K+K+  Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW+++GHWD+Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 297 FMMDRVLWEKTGHWDNYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+ +E      L+  +Y  
Sbjct: 351 LPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI+VKLSTRPEKR+GSD +WD AE  +   L+      ++ I     LGEGAFYGP
Sbjct: 411 FGFEKIVVKLSTRPEKRIGSDEMWDRAEADLAVALE------ENNIPFEYQLGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF+LPSR +A YV   +E+  PVMIHRA+ GS+ERFIGI
Sbjct: 465 KIEFTLYDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E F G  P WL+P+Q ++  IT S  EY  E+   L +  + ++ D RNE I +KIRE
Sbjct: 525 LTEEFAGFFPTWLAPVQVVIMNITDSQSEYVNELTQKLSNAGIRVKADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           H+++++P +++CGDKE     I +R         + + + I  L +E      ++
Sbjct: 585 HTLRRVPYMLVCGDKEVESGKIAVRTRRGKDLGSMDVNEVIEKLQQEIRSRSLKQ 639


>gi|167623946|ref|YP_001674240.1| threonyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
 gi|189083622|sp|B0TT20|SYT_SHEHH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|167353968|gb|ABZ76581.1| threonyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
          Length = 642

 Score =  679 bits (1751), Expect = 0.0,   Method: Composition-based stats.
 Identities = 287/647 (44%), Positives = 414/647 (63%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS + F    +  DVA  I   LAK  +A  +NG++ D  D +  +  +
Sbjct: 1   MPV---ITLPDGSKREFANPVSTLDVAADIGPGLAKACIAGRVNGELKDACDIIETDSEL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   + ++RHSCAH++  A++ ++PE ++AIGP+I++GFYYD D +   + +++
Sbjct: 58  SIITAKDEEGVEILRHSCAHLLGHAIKQLFPETKMAIGPVIDNGFYYDIDLDHKLTQEDI 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M  +   +    K+ +S ++AR+ FE++ E YK+ IL E+IP      LY   E
Sbjct: 118 DALEKRMAALAKTNYAVDKRVVSWQEARDTFEARGEDYKMAILDENIPKDSTPALYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +    + F KLM VAGAYWRG+S+  ML R+YGTAW  ++ L  +L  L
Sbjct: 178 YIDMCRGPHVPNMKFCQNF-KLMSVAGAYWRGNSDNKMLQRVYGTAWADKKALKVHLNRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW +F  L  ++R+K+ +  Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWSLFLELEKFIRQKLGQYTYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+
Sbjct: 297 LMMDRVLWERSGHWDKYSDAMFT------TSSENREYAIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFG  +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+  E      ++   Y  
Sbjct: 351 LPLRMAEFGCCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQVQQEVSACIRMVYDTYAT 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF  I+VKLSTRPEKR+G D +WD AE  +K  L        + I   +L GEGAFYGP
Sbjct: 411 FGFSNIVVKLSTRPEKRIGDDDMWDRAEEALKKALKA------NDIEFEILPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+D+ LP R  A YV   + +  PVMIHRA+ GS+ERF+GI
Sbjct: 465 KIEFTLHDCLDRAWQCGTVQLDYALPGRLGATYVAEDNSRQTPVMIHRAILGSLERFLGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE + G  P WLSP+Q +V  IT    +Y   + NL K H +    D RNE I +KIRE
Sbjct: 525 LIEEYAGKFPAWLSPVQVVVMNITDKQSDYVDNVVNLFKEHGIRATKDLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H+++++P +++ GD+E     + +R        K+ L +    L  +
Sbjct: 585 HTLRRVPYLLVVGDQEMENNEVAVRTREGVDLGKMQLEEFATKLKNQ 631


>gi|89071308|ref|ZP_01158467.1| threonyl-tRNA synthetase [Oceanicola granulosus HTCC2516]
 gi|89043173|gb|EAR49409.1| threonyl-tRNA synthetase [Oceanicola granulosus HTCC2516]
          Length = 654

 Score =  679 bits (1751), Expect = 0.0,   Method: Composition-based stats.
 Identities = 329/654 (50%), Positives = 438/654 (66%), Gaps = 10/654 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           S I LTFPDG+ + +P   T ++VA  IS SL KKA++  ++G   DL  P+  + +I I
Sbjct: 6   SPITLTFPDGNARQYPAGVTAAEVAADISTSLGKKAISAQVDGAHWDLQWPIEADAAIAI 65

Query: 62  ITPEDPR-SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            T +D   +L ++RH  AHIMA AVQ IWP+V+V IGP+IE G+YYDFD+ +PF+ ++L 
Sbjct: 66  NTMKDEAPALELVRHDLAHIMARAVQEIWPDVKVTIGPVIEHGWYYDFDRAEPFTPEDLG 125

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEKKM+EII +  P   +    ++A   +    E YKVE++ESIP  E + +Y  G+W 
Sbjct: 126 AIEKKMREIINKRDPVRTETWERDRAIAHYRDNDEPYKVELIESIPGSEPIRMYWHGDWQ 185

Query: 181 DLCRGPHVRSTGQ-VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           DLCRGPH++ TGQ     FKLM VAGAYWRGDS+R ML RIYG A+ T+  L  +L+ LE
Sbjct: 186 DLCRGPHLQHTGQVPGDAFKLMSVAGAYWRGDSSRAMLQRIYGAAFLTRDALKAHLHRLE 245

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQ 298
           E++KRDHRKL REMDLFH+  +  G +FWH  GW ++ TL  YMRRK +   Y EINTPQ
Sbjct: 246 EAQKRDHRKLGREMDLFHMQAEAPGQVFWHPNGWTVYTTLQDYMRRKQRAGGYREINTPQ 305

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW+ SGHWD Y+ +MF V+  ++  ++    ALKPMNCP HV VFN GLKSYR+L
Sbjct: 306 VVDRKLWEASGHWDKYQDHMFIVEVDEEHAQEKAINALKPMNCPCHVQVFNQGLKSYRDL 365

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFGS  R EPSG+LHG+MRVRGFTQDDAH+FCT++Q+  EC +  N +  IY+D 
Sbjct: 366 PLRLAEFGSCSRYEPSGALHGIMRVRGFTQDDAHIFCTEDQIEAECARFINFLAGIYEDL 425

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF    +K +TRPEKRVGSDA WD  EN ++  +     +        +  G+GAFYGPK
Sbjct: 426 GFPTFEIKFATRPEKRVGSDASWDHVENALESAIRATGRT------YTLEPGDGAFYGPK 479

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++ L DAIGR WQCGT QVD NLP R  A Y+     K  P M+HRA  GS ERFIGI+
Sbjct: 480 LDFYLTDAIGRTWQCGTFQVDPNLPERLGATYIGEDGAKHRPYMLHRATLGSFERFIGIL 539

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE   G LP WL+P Q +V +I S A  Y  E+ + L++  +  E D RNE IN+K+REH
Sbjct: 540 IEEHAGKLPFWLAPRQVVVASIVSDADGYVHEVVDALQAAGVRAEADTRNEKINFKVREH 599

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           S+ K+P+I+ CG +E  ER++ +RR G   T+   L   +  L+ E+ PPD ++
Sbjct: 600 SVGKVPVILACGGREVEERTVSVRRLGDKATRTAGLDALVGELSAEATPPDLRR 653


>gi|227327045|ref|ZP_03831069.1| threonyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 642

 Score =  679 bits (1751), Expect = 0.0,   Method: Composition-based stats.
 Identities = 294/647 (45%), Positives = 430/647 (66%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP    +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D SD +  +  +
Sbjct: 1   MPV---ITLPDGSQRHYDHAVSPLDVALDIGPGLAKACIAGRVNGELVDASDKIDTDAQL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L +IRHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D ++  + +++
Sbjct: 58  AIITAKDEAGLEIIRHSCAHLLGHAIKQLWPDTKMAIGPVIDNGFYYDVDIDRTLTQEDI 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M E+   D   +K+ +S ++AR+ F ++ E YK+ IL E+I   +   LY   E
Sbjct: 118 ELLEKRMHELADTDYDVIKKKVSWQEARDAFAARGETYKIAILDENISRDDRPGLYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KL K +GAYWRGDS   ML RIYGTAW  +++L  YL  L
Sbjct: 178 YIDMCRGPHVPNMRFCHHF-KLQKTSGAYWRGDSKNKMLQRIYGTAWADKKQLAAYLQRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF+ L +++R K+K   Y+E+  P
Sbjct: 237 EEASKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEAFVRMKLKSYQYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ +W+++GHW++Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 297 FMMDRVMWEKTGHWENYKEAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  
Sbjct: 351 LPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQVRDEVNSCIKMVYDMYST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI+VKLSTRPEKR+GSD +WD AE  +   L      +++ I      GEGAFYGP
Sbjct: 411 FGFEKIVVKLSTRPEKRIGSDEMWDRAEADLAAAL------TENNIEFAYQPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF+LP R NA YV   +E+  PVMIHRA+ GS+ERFIGI
Sbjct: 465 KIEFTLHDCLDRAWQCGTVQLDFSLPGRLNASYVGESNERQVPVMIHRAILGSMERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E F G  P WL+P+QA++  IT S  +Y  E+   L+   + ++ D RNE I +KIRE
Sbjct: 525 LTEEFAGFFPTWLAPVQAVIINITDSQSDYVNELTRKLQEAGIRVKADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H+++++P +++CGDKE     + +R         + + + I  L +E
Sbjct: 585 HTLRRVPYMLVCGDKEVETGKVAVRTRRGKDLGSMDVSEVISKLQQE 631


>gi|15601053|ref|NP_232683.1| threonyl-tRNA synthetase [Vibrio cholerae O1 biovar eltor str.
           N16961]
 gi|153817556|ref|ZP_01970223.1| threonyl-tRNA synthetase [Vibrio cholerae NCTC 8457]
 gi|227811910|ref|YP_002811920.1| threonyl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|229506559|ref|ZP_04396068.1| threonyl-tRNA synthetase [Vibrio cholerae BX 330286]
 gi|229510645|ref|ZP_04400125.1| threonyl-tRNA synthetase [Vibrio cholerae B33]
 gi|229517224|ref|ZP_04406669.1| threonyl-tRNA synthetase [Vibrio cholerae RC9]
 gi|229606038|ref|YP_002876742.1| threonyl-tRNA synthetase [Vibrio cholerae MJ-1236]
 gi|254850514|ref|ZP_05239864.1| threonyl-tRNA synthetase [Vibrio cholerae MO10]
 gi|255745914|ref|ZP_05419861.1| threonyl-tRNA synthetase [Vibrio cholera CIRS 101]
 gi|262163529|ref|ZP_06031275.1| threonyl-tRNA synthetase [Vibrio cholerae INDRE 91/1]
 gi|298500133|ref|ZP_07009939.1| threonyl-tRNA synthetase [Vibrio cholerae MAK 757]
 gi|22654144|sp|Q9KMN7|SYT_VIBCH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|254783545|sp|C3LUV8|SYT_VIBCM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|9657684|gb|AAF96196.1| threonyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|126511981|gb|EAZ74575.1| threonyl-tRNA synthetase [Vibrio cholerae NCTC 8457]
 gi|227011052|gb|ACP07263.1| threonyl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|229345260|gb|EEO10233.1| threonyl-tRNA synthetase [Vibrio cholerae RC9]
 gi|229353090|gb|EEO18030.1| threonyl-tRNA synthetase [Vibrio cholerae B33]
 gi|229356910|gb|EEO21828.1| threonyl-tRNA synthetase [Vibrio cholerae BX 330286]
 gi|229372524|gb|ACQ62946.1| threonyl-tRNA synthetase [Vibrio cholerae MJ-1236]
 gi|254846219|gb|EET24633.1| threonyl-tRNA synthetase [Vibrio cholerae MO10]
 gi|255735668|gb|EET91066.1| threonyl-tRNA synthetase [Vibrio cholera CIRS 101]
 gi|262028096|gb|EEY46755.1| threonyl-tRNA synthetase [Vibrio cholerae INDRE 91/1]
 gi|297542114|gb|EFH78165.1| threonyl-tRNA synthetase [Vibrio cholerae MAK 757]
          Length = 642

 Score =  679 bits (1751), Expect = 0.0,   Method: Composition-based stats.
 Identities = 298/642 (46%), Positives = 425/642 (66%), Gaps = 17/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS ++F    +  +VA+SI   LAK  +A  +NG   D  D +  + S+EIIT +
Sbjct: 4   ITLPDGSQRHFDNPVSTLEVAQSIGPGLAKATIAGRVNGARVDACDLIEHDASLEIITTK 63

Query: 66  DP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  A++ ++P  ++AIGP I+ GFYYD D EQ  S ++L +IE 
Sbjct: 64  DEVDGLEIVRHSCAHLLGHALKQLYPNAKMAIGPTIDSGFYYDIDLEQSLSQEDLEKIEA 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLC 183
           +M E+       +K+ +S ++AR+ FES+ E+YK+EIL E++   +   LY   E+ D+C
Sbjct: 124 RMVELAKTKYAVVKKKVSWQEARDTFESRGESYKMEILDENVARDDRPGLYHHEEYIDMC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV   G  + F KL+ +AGAYWRG+S+  ML RIYGTA++ ++ L  +L  LEE+ K
Sbjct: 184 RGPHVPHMGFCQNF-KLLNIAGAYWRGNSDNKMLQRIYGTAFHDKKALQAHLTRLEEAAK 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRK+ +++DLFH+ ++  G++FWH  GW IF+ L  ++R+K+ +  Y+E+  P ++D+
Sbjct: 243 RDHRKIGKQLDLFHMQQEAPGMVFWHHNGWSIFRDLEIFIRQKLNEYGYQEVKGPLMMDR 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y   MF       T  + R +A+KPMNCPGH+ +FN GLKSYR+LP+R+
Sbjct: 303 VLWERSGHWDKYADAMFT------TSSENREYAIKPMNCPGHIQIFNQGLKSYRDLPLRM 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSGSLHG+MRVRGFTQDDAH+FCT++Q+  E      ++   Y  FGF+ 
Sbjct: 357 AEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTEDQIQQEVTSCIKMVYDTYTTFGFQN 416

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+VKLSTRPEKRVGSD +WD +E  +   L  +       I   +  GEGAFYGPK E+ 
Sbjct: 417 IVVKLSTRPEKRVGSDEIWDKSEQALIDSLKAM------DIPFEIQEGEGAFYGPKIEFT 470

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D + R WQCGT+Q+DFNLP+R  A YV   +E+  PVMIHRA+ GS+ERFIGI+IE +
Sbjct: 471 LYDCLDRAWQCGTVQLDFNLPTRLGATYVGESNERLIPVMIHRAILGSLERFIGILIEEY 530

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P QA+V  IT    +YA E+A  L+   +  + D RNE I +KIREH++K+
Sbjct: 531 AGFFPTWLAPEQAVVVNITDKQADYAHEVAQKLQKCGIRAKADLRNEKIGFKIREHTLKR 590

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P +++CGD+E     I +R        K  L D I  +  E
Sbjct: 591 VPYMLVCGDQEMEAGEIAVRTRKGKDLGKFKLDDFIAHIQAE 632


>gi|240949517|ref|ZP_04753857.1| threonyl-tRNA synthetase [Actinobacillus minor NM305]
 gi|240296090|gb|EER46751.1| threonyl-tRNA synthetase [Actinobacillus minor NM305]
          Length = 643

 Score =  679 bits (1751), Expect = 0.0,   Method: Composition-based stats.
 Identities = 296/648 (45%), Positives = 430/648 (66%), Gaps = 16/648 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS + F    +  +VA+SI   LAK  +A  +NG+  D SD +  + ++EIIT +
Sbjct: 4   ITLPDGSQRQFDNPVSVMEVAQSIGAGLAKATIAGRVNGERRDASDIISEDATLEIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHS AH++  A++ ++P V++AIGP I++GFYYD D ++  + +++  +EK+
Sbjct: 64  DEDGLEIIRHSTAHLLGHAIKQLFPNVKMAIGPTIDNGFYYDIDLDRSLTQEDIDALEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K+ +S ++AR+ FES+ E YK+ IL E+I   ++  LY   E+ D+CR
Sbjct: 124 MLELAKTNYDVVKKRVSWQEARDTFESRGEPYKMAILDENISKDDSPALYHHEEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +      F KL KVAGAYWRGDS   ML RIYGTAW  +++L  YL  LEE+ KR
Sbjct: 184 GPHVPNMRFCHHF-KLQKVAGAYWRGDSKNKMLQRIYGTAWADKKQLADYLQRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ + +DL+H+ E+  G++FWH  GW IF+ L +++R K+K+ DY+E+  P ++D+ 
Sbjct: 243 DHRKIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW +Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWERTGHWQNYADLMFT------TQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++  IY  FGFE I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIESEVTSCIKMVYDIYSTFGFENI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPE R+G DA+WD AE  +   L        + +   +  GEGAFYGPK E+ L
Sbjct: 417 AVKLSTRPENRIGDDAMWDRAEEGLANAL------RNNGLEYEIQEGEGAFYGPKIEFAL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D + R+WQCGT+Q+DF LP R +A YV   + +  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 RDCLDREWQCGTVQLDFALPGRLDASYVAEDNGRRTPVMIHRAILGSIERFIGIITEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+QA+V  IT S  EY Q++   L    L ++ D RNE + +K+REH+++++
Sbjct: 531 GFFPAWLAPVQAVVMNITDSQAEYVQKVVKQLSDAGLRVKADLRNEKVGFKVREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           P +++CGDKE +E  + +R           + + + IL  +    + +
Sbjct: 591 PYMLVCGDKEIAEGKVSVRTRKGADLGTYKVEEFVEILKSQVRGRELK 638


>gi|71908290|ref|YP_285877.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Dechloromonas
           aromatica RCB]
 gi|123733181|sp|Q47CM4|SYT_DECAR RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|71847911|gb|AAZ47407.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Dechloromonas
           aromatica RCB]
          Length = 638

 Score =  679 bits (1751), Expect = 0.0,   Method: Composition-based stats.
 Identities = 309/649 (47%), Positives = 435/649 (67%), Gaps = 18/649 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSI 59
           MP    +  PDGSI+++    T ++VA SI   LA+ A+A  I G++ D S  + +   +
Sbjct: 1   MPD---IKLPDGSIRSYEQAVTVAEVAASIGAGLARAALAGKIGGQLVDTSYLIEQNADL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT  D   L +IRHS AH++A AV+ ++PE QV IGP+IE+GFYYDF  ++PF+ ++L
Sbjct: 58  AIITERDAEGLELIRHSTAHLLAYAVKELFPEAQVTIGPVIENGFYYDFAYKRPFTPEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEK+M E+  +D P  ++  + + A + F    E YK E++ +IPA + V+LYR+G++
Sbjct: 118 VAIEKRMAELAKKDIPVSREVWARDDAVKFFLDLGEKYKAELIGAIPADQQVSLYREGDF 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV +T ++K F KLMKVAGAYWRGD     L RIYGTAW  +++L  YL+ LE
Sbjct: 178 IDLCRGPHVPTTAKLKVF-KLMKVAGAYWRGDHRNEQLQRIYGTAWAKKEDLDAYLHMLE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+EKRDHR+L ++ DLFH+ ++  G++FWH KGW I+Q +  YMR     + Y+E+  PQ
Sbjct: 237 EAEKRDHRRLGKQYDLFHMQDEAPGLVFWHPKGWAIWQEIEGYMRAVYRNNGYQEVRCPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +LD+ LW++SGHW+ Y+ NMF       T  + R +A+KPMNCPGHV VFN GL+SYREL
Sbjct: 297 ILDKSLWEKSGHWEHYKDNMFT------TSSENRDYAVKPMNCPGHVQVFNAGLRSYREL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R  EFGS +RNEP+G+LHGLMRVRGF QDD H+FCT++Q+ +E    + L+  +Y DF
Sbjct: 351 PLRYGEFGSCHRNEPAGALHGLMRVRGFVQDDGHIFCTEDQIESEVTAFNALVKKVYADF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF  + VKL+ RP+ RVG+D +WD AE+ ++  L          +    L GEGAFYGPK
Sbjct: 411 GFNDVAVKLALRPDSRVGADDVWDRAEDALRQGLRASG------LEWTELPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ ++DAIGR WQCGT+QVDF++P R  A YV +   +  PVM+HRA+ GS+ERFIGI+
Sbjct: 465 IEFHIRDAIGRSWQCGTMQVDFSMPGRLGAEYVGADDTRKVPVMLHRAILGSLERFIGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IENF G LPLWL+P+Q +V  I+    +YA E+A  L S     E D RNE I YKIREH
Sbjct: 525 IENFAGALPLWLAPVQVVVLNISEKQADYAAEVAQKLHSAGFRAEADLRNEKITYKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLP 647
           S+ ++P  ++ GDKE ++  + +R  G     ++ +   I  L +E + 
Sbjct: 585 SLNRLPYQLVVGDKEKADGLVAVRTRGGQDLGQMPVDVLIKRLQEEVVA 633


>gi|56421254|ref|YP_148572.1| threonyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
 gi|297529120|ref|YP_003670395.1| threonyl-tRNA synthetase [Geobacillus sp. C56-T3]
 gi|73919792|sp|Q5KWD2|SYT_GEOKA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|56381096|dbj|BAD77004.1| threonyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
 gi|297252372|gb|ADI25818.1| threonyl-tRNA synthetase [Geobacillus sp. C56-T3]
          Length = 652

 Score =  679 bits (1751), Expect = 0.0,   Method: Composition-based stats.
 Identities = 261/652 (40%), Positives = 413/652 (63%), Gaps = 20/652 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP  I++TFPDG+ K FP   T  D+A SIS  L KKA+A  +NG+  DL  P+  +G +
Sbjct: 1   MPDVIRITFPDGAEKEFPKGTTTEDIAASISPGLKKKAIAGKLNGRFVDLRTPLHEDGEL 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT + P +L ++RHS AH+MA+A++ ++  V++ +GP+IE+GFYYD D E   + D+L
Sbjct: 61  VIITQDMPEALDILRHSTAHLMAQAIKRLYGNVKLGVGPVIENGFYYDIDMEHKLTPDDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IE +M++I+  +   +++ +S E+A  L+E   +  K+E++  IP  E +++Y QGE+
Sbjct: 121 PKIEAEMRKIVKENLDIVRKEVSREEAIRLYEEIGDELKLELIADIPEGEPISIYEQGEF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRG HV STG++K+F KL+ ++GAYWRGDSN  ML RIYGTA+  +++L +YL  LE
Sbjct: 181 FDLCRGVHVPSTGKIKEF-KLLSISGAYWRGDSNNKMLQRIYGTAFFKKEDLDRYLRLLE 239

Query: 240 ESEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTP 297
           E+++RDHRKL +E++LF    + G G+  W  KG  I + +  Y+  +++   Y+ + TP
Sbjct: 240 EAKERDHRKLGKELELFTTSQQVGQGLPLWLPKGATIRRIIERYIVDKEVALGYDHVYTP 299

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    L++ SGHWD Y+ NMF     D+         L+PMNCP H+ ++   L SYRE
Sbjct: 300 VLGSVELYKTSGHWDHYKENMFPPMEMDN-----EELVLRPMNCPHHMMIYKSKLHSYRE 354

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+ +E  ++ NLI+ +YKD
Sbjct: 355 LPIRIAELGTMHRYEMSGALTGLQRVRGMTLNDAHIFVRPDQIKDEFKRVVNLILEVYKD 414

Query: 418 FGFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           FG E+   +LS R           D +W+ A+ +++  +D +       ++     GE A
Sbjct: 415 FGIEEYSFRLSYRDPHDKEKYYDDDEMWEKAQRMLREAMDELG------LDYYEAEGEAA 468

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  ++ A+G+D    T+Q+DF LP RF+  Y+    +   PV+IHR V  ++ER
Sbjct: 469 FYGPKLDVQVRTALGKDETLSTVQLDFLLPERFDLTYIGEDGKPHRPVVIHRGVVSTMER 528

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETIN 592
           F+  +IE +KG  P WL+P+Q  V  ++    ++YA ++   LK     +E D R+E I 
Sbjct: 529 FVAFLIEEYKGAFPTWLAPVQVKVIPVSPEAHLDYAYDVQRTLKERGFRVEVDERDEKIG 588

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           YKIRE  ++KIP +++ GDKE SER++ +RR+G   ++ + L + + +L  +
Sbjct: 589 YKIREAQMQKIPYMLVVGDKEVSERAVNVRRYGEKESRTMGLDEFMALLADD 640


>gi|121591402|ref|ZP_01678683.1| threonyl-tRNA synthetase [Vibrio cholerae 2740-80]
 gi|121546739|gb|EAX56913.1| threonyl-tRNA synthetase [Vibrio cholerae 2740-80]
          Length = 642

 Score =  679 bits (1751), Expect = 0.0,   Method: Composition-based stats.
 Identities = 299/642 (46%), Positives = 425/642 (66%), Gaps = 17/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS ++F    +  +VA+SI   LAK  +A  +NG   D  D +  + S+EIIT +
Sbjct: 4   ITLPDGSQRHFDNPVSTLEVAQSIGPGLAKATIAGRVNGARVDACDLIEHDASLEIITTK 63

Query: 66  DP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  A++ ++P  ++AIGP I+ GFYYD D EQ  S ++L +IE 
Sbjct: 64  DEVDGLEIVRHSCAHLLGHALKQLYPNAKMAIGPTIDSGFYYDIDLEQSLSQEDLEKIEA 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLC 183
           +M E+       +K+ +S ++AR+ FES+ E+YK+EIL E++   +   LY   E+ D+C
Sbjct: 124 RMVELAKTKYAVVKKKVSWQEARDTFESRGESYKMEILDENVARDDRPGLYHHEEYIDMC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV   G  + F KL+ +AGAYWRG+S+  ML RIYGTA++ ++ L  +L  LEE+ K
Sbjct: 184 RGPHVPHMGFCQNF-KLLNIAGAYWRGNSDNKMLQRIYGTAFHDKKALQAHLTRLEEAAK 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRK+ +++DLFH+ ++  G++FWH  GW IF+ L  ++R+K+ +  Y+E+  P ++D+
Sbjct: 243 RDHRKIGKQLDLFHMQQEAPGMVFWHHNGWSIFRDLEIFIRQKLNEYGYQEVKGPLMMDR 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y   MF       T  + R +A+KPMNCPGH+ +FN GLKSYR+LP+R+
Sbjct: 303 VLWERSGHWDKYADAMFT------TSSENREYAIKPMNCPGHIQIFNQGLKSYRDLPLRM 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSGSLHG+MRVRGFTQDDAH+FCT++Q+  E      ++   Y  FGF+ 
Sbjct: 357 AEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTEDQIQQEVTSCIKMVYDTYTTFGFQN 416

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+VKLSTRPEKRVGSD +WD +E  +   L  +       I   V  GEGAFYGPK E+ 
Sbjct: 417 IVVKLSTRPEKRVGSDEIWDKSEQALIDSLKAM------DIPFEVQEGEGAFYGPKIEFT 470

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D + R WQCGT+Q+DFNLP+R  A YV   +E+  PVMIHRA+ GS+ERFIGI+IE +
Sbjct: 471 LYDCLDRAWQCGTVQLDFNLPTRLGATYVGESNERLIPVMIHRAILGSLERFIGILIEEY 530

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P QA+V  IT    +YA E+A  L+   +  + D RNE I +KIREH++K+
Sbjct: 531 AGFFPTWLAPEQAVVVNITDKQADYAHEVAQKLQKCGIRAKADLRNEKIGFKIREHTLKR 590

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P +++CGD+E     I +R        K  L D I  +  E
Sbjct: 591 VPYMLVCGDQEMEAGEIAVRTRKGKDLGKFKLDDFIAHIQAE 632


>gi|261418266|ref|YP_003251948.1| threonyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|319767774|ref|YP_004133275.1| threonyl-tRNA synthetase [Geobacillus sp. Y412MC52]
 gi|261374723|gb|ACX77466.1| threonyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|317112640|gb|ADU95132.1| threonyl-tRNA synthetase [Geobacillus sp. Y412MC52]
          Length = 652

 Score =  679 bits (1751), Expect = 0.0,   Method: Composition-based stats.
 Identities = 262/652 (40%), Positives = 413/652 (63%), Gaps = 20/652 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP  I++TFPDG+ K FP   T  DVA SIS  L KKA+A  +NG+  DL  P+  +G +
Sbjct: 1   MPDVIRITFPDGAEKEFPKGTTTEDVAASISPGLKKKAIAGKLNGRFVDLRTPLHEDGEL 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT + P +L ++RHS AH+MA+A++ ++  V++ +GP+IE+GFYYD D E   + D+L
Sbjct: 61  VIITQDMPEALDILRHSTAHLMAQAIKRLYGNVKLGVGPVIENGFYYDIDMEHKLTPDDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IE +M++I+  +   +++ +S E+A  L+E   +  K+E++  IP  E +++Y QGE+
Sbjct: 121 PKIEAEMRKIVKENLDIVRKEVSREEAIRLYEEIGDELKLELIADIPEGEPISIYEQGEF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRG HV STG++K+F KL+ ++GAYWRGDSN  ML RIYGTA+  +++L +YL  LE
Sbjct: 181 FDLCRGVHVPSTGKIKEF-KLLSISGAYWRGDSNNKMLQRIYGTAFFKKEDLDRYLRLLE 239

Query: 240 ESEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTP 297
           E+++RDHRKL +E++LF    + G G+  W  KG  I + +  Y+  +++   Y+ + TP
Sbjct: 240 EAKERDHRKLGKELELFTTSQQVGQGLPLWLPKGATIRRIIERYIVDKEVALGYDHVYTP 299

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    L++ SGHWD Y+ NMF     D+         L+PMNCP H+ ++   L SYRE
Sbjct: 300 VLGSVELYKTSGHWDHYKENMFPPMEMDN-----EELVLRPMNCPHHMMIYKSKLHSYRE 354

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+ +E  ++ NLI+ +YKD
Sbjct: 355 LPIRIAELGTMHRYEMSGALTGLQRVRGMTLNDAHIFVRPDQIKDEFKRVVNLILEVYKD 414

Query: 418 FGFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           FG E+   +LS R           D +W+ A+ +++  +D +       ++     GE A
Sbjct: 415 FGIEEYSFRLSYRDPHDKEKYYDDDEMWEKAQRMLREAMDELG------LDYYEAEGEAA 468

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  ++ A+G+D    T+Q+DF LP RF+  Y+    +   PV+IHR V  ++ER
Sbjct: 469 FYGPKLDVQVRTALGKDETLSTVQLDFLLPERFDLTYIGEDGKPHRPVVIHRGVVSTMER 528

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETIN 592
           F+  +IE +KG  P WL+P+Q  V  ++    ++YA ++   LK     +E D R+E I 
Sbjct: 529 FVAFLIEEYKGAFPTWLAPVQVKVIPVSPEAHLDYAYDVQRTLKERGFRVEVDERDEKIG 588

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           YKIRE  ++KIP +++ GDKE SER++ +RR+G   ++ + L + + +L  +
Sbjct: 589 YKIREAQMQKIPYMLVVGDKEVSERAVNVRRYGEKESRTMGLDEFMALLADD 640


>gi|254419068|ref|ZP_05032792.1| threonyl-tRNA synthetase [Brevundimonas sp. BAL3]
 gi|196185245|gb|EDX80221.1| threonyl-tRNA synthetase [Brevundimonas sp. BAL3]
          Length = 642

 Score =  679 bits (1751), Expect = 0.0,   Method: Composition-based stats.
 Identities = 329/651 (50%), Positives = 444/651 (68%), Gaps = 13/651 (1%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEII 62
            I L FPDG+++ +P  +T  DVA SIS SLAKKAV   +NG+  D+   +  G    +I
Sbjct: 1   MIDLKFPDGAVRQYPAGSTARDVATSISPSLAKKAVLAELNGEQRDMGRVLETGGDFRLI 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
             +DP +L  IRH  AH++AEAVQ+++P  QV IGP IEDGFYYDF +++PFS+D+ A I
Sbjct: 61  MRDDPAALYTIRHDTAHVLAEAVQTLFPGTQVTIGPAIEDGFYYDFFRDEPFSTDDFAAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M  I+ RD+ F ++    ++A   FE++ E +K E+++ +P  E +TLY+QG+W DL
Sbjct: 121 EKEMGRIVDRDAKFEREVWDRDEAIVFFEARGEKFKAELIKDLPENETITLYKQGDWIDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH  ST  V K FKL K+AGAYWRGDS R  L RIYGTAW T+++L  YL  LEE+E
Sbjct: 181 CRGPHFPSTRHVGKAFKLTKLAGAYWRGDSKREQLQRIYGTAWATKEDLDAYLQRLEEAE 240

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRK+ + M+LFH+ E+G G++FWH KGW +++ L +YMRR++    Y E+ TPQVLD
Sbjct: 241 KRDHRKVGKAMELFHMQEEGRGMVFWHPKGWILWRVLEAYMRRRLDAAGYVEVKTPQVLD 300

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           +  W+QSGHWD YR NMF  +       +  T +LKPMNCPGHV +F+ G +SYRELP+R
Sbjct: 301 RKFWEQSGHWDKYRPNMFVCETV-----EGETLSLKPMNCPGHVQIFDQGQRSYRELPLR 355

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AEFG+ +R EPSGSLHGLMRVRGFTQDDAH+FC ++Q+  E  +   L  S++ D G E
Sbjct: 356 MAEFGACHRYEPSGSLHGLMRVRGFTQDDAHIFCREDQIVEETAEFIKLARSVHADLGME 415

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              + L TRPE R GSD  WD      K      + +        V  G+GAFY PK ++
Sbjct: 416 TAYISLGTRPENRAGSDEFWD------KAEALMAEAARAAGTEPVVTEGDGAFYAPKLDF 469

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
           I+KDAIGR+W CGTIQ+D+ LP R +A Y+    +K  PVM+HRA+ GS ERFIGIMIEN
Sbjct: 470 IVKDAIGREWTCGTIQLDYVLPERLDATYIAEDGQKHRPVMLHRAILGSFERFIGIMIEN 529

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  PLWL+P QA+V TITS A +YA+++    K+  L  E D RNE + YK+REHS+ 
Sbjct: 530 YAGAFPLWLAPTQAVVATITSDADDYARDVMARFKAAGLRTEIDLRNEKVGYKVREHSVG 589

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           K+P+I + G +EA +  + IRR GS     V++ +AI ILT E+ PPD ++
Sbjct: 590 KVPVIAVVGRQEAEQGLVAIRRLGSQAQTVVTVEEAIRILTDEATPPDLKR 640


>gi|260433159|ref|ZP_05787130.1| threonyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157]
 gi|260416987|gb|EEX10246.1| threonyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157]
          Length = 652

 Score =  679 bits (1751), Expect = 0.0,   Method: Composition-based stats.
 Identities = 327/652 (50%), Positives = 437/652 (67%), Gaps = 10/652 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
             + LTFPDG+ +++    T ++VA  IS SLAKKA++  +NG+  DL  P+  +  I I
Sbjct: 6   KSVSLTFPDGNSRSYAAGVTPAEVAADISTSLAKKAISATVNGQHWDLQWPIEQDAEIAI 65

Query: 62  ITPEDP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            T +D  ++  +IRH  AH+MA AVQ IWP+ +V IGP+IE+G+YYDFD+ +PF+ ++L 
Sbjct: 66  HTMKDEAQANELIRHDFAHVMARAVQEIWPDTKVTIGPVIENGWYYDFDRAEPFTPEDLG 125

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEKKM+EII +  P   +    E+A   +++  E YKVE++E+IP  E V +Y  G W 
Sbjct: 126 LIEKKMKEIINKRDPVTTEIWDRERAIAFYKANNEPYKVELIEAIPGDEPVRMYWHGHWQ 185

Query: 181 DLCRGPHVRSTGQ-VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           DLCRGPH++ TGQ     FKLM +AGAYWRGDSNRPML RIYG A+  +++L  YL+ LE
Sbjct: 186 DLCRGPHLQHTGQLPGDAFKLMSIAGAYWRGDSNRPMLQRIYGVAFTGKEKLKAYLHMLE 245

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQ 298
           E+ KRDHRKL REMDLFH+ E+  G IFWH  GW I+  L  YMRR+ +   Y E+NTPQ
Sbjct: 246 EAAKRDHRKLGREMDLFHMQEEAPGQIFWHPNGWTIYTQLQDYMRRQQRRGGYVEVNTPQ 305

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHWD Y+ NMF V+  ++  ++    ALKPMNCP HV +F  GLKSYR+L
Sbjct: 306 VVDRKLWERSGHWDKYQENMFIVEVDEEHAREKAVNALKPMNCPCHVEIFKQGLKSYRDL 365

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFGS  R EPSG+LHG+MRVRGF QDDAH+F T++Q+ +EC +    +  +YKD 
Sbjct: 366 PLRMAEFGSCARYEPSGALHGIMRVRGFAQDDAHIFSTEDQIGDECARFIGFLTDVYKDL 425

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+   VK S RPE+R GSD +WD AE  +      +  +    +   +  GEGAFYGPK
Sbjct: 426 GFDSFKVKFSDRPEQRAGSDEVWDKAEEAL------LTATRAAGVEPELNPGEGAFYGPK 479

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E++L DAIGRDWQCGT QVDF LP R +A Y+ +   K  PVM+HRA  GS ERFIGI+
Sbjct: 480 LEFVLTDAIGRDWQCGTFQVDFVLPERLDATYIGADGAKHRPVMLHRACLGSFERFIGIL 539

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE   G LP WL+P Q +V +ITS A +Y  E+   LK+  +  E D RNE INYK+REH
Sbjct: 540 IEEHAGKLPFWLAPRQVVVASITSEADDYVLEVVETLKAAGVRAEADIRNEKINYKVREH 599

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDC 650
           S+ K+P+I+  G +E  ER++ +RR G   TQ   L      L   + PPD 
Sbjct: 600 SVGKVPVILAVGHREVEERTVSVRRLGEKQTQVQPLDAVTKELAHAATPPDL 651


>gi|258625495|ref|ZP_05720387.1| threonyl-tRNA synthetase [Vibrio mimicus VM603]
 gi|258582201|gb|EEW07058.1| threonyl-tRNA synthetase [Vibrio mimicus VM603]
          Length = 642

 Score =  679 bits (1751), Expect = 0.0,   Method: Composition-based stats.
 Identities = 298/642 (46%), Positives = 425/642 (66%), Gaps = 17/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS ++F    +  +VA+SI   LAK  +A  +NG   D  D +  + S+EIIT +
Sbjct: 4   ITLPDGSQRHFDNPVSTLEVAQSIGPGLAKATIAGRVNGARVDACDLIEHDASLEIITTK 63

Query: 66  DP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  A++ ++P  ++AIGP I+ GFYYD D EQ  S ++L +IE 
Sbjct: 64  DEVDGLEIVRHSCAHLLGHALKQLYPNAKMAIGPTIDSGFYYDIDLEQSLSQEDLEKIEA 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLC 183
           +M E+       +K+ +S ++AR+ FES+ E+YK+EIL E++   +   LY   E+ D+C
Sbjct: 124 RMVELAKTKYAVVKKKVSWQEARDTFESRGESYKMEILDENVARDDRPGLYHHEEYIDMC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV   G  + F KL+ VAGAYWRG+S+  ML RIYGTA++ ++ L  +L  LEE+ K
Sbjct: 184 RGPHVPHMGFCQNF-KLLNVAGAYWRGNSDNKMLQRIYGTAFHDKKALQAHLIRLEEAAK 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRK+ +++DLFH+ ++  G++FWH  GW IF+ L  ++R+K+ +  Y+E+  P ++D+
Sbjct: 243 RDHRKIGKQLDLFHMQQEAPGMVFWHHNGWSIFRDLEIFIRQKLNEYGYQEVKGPLMMDR 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y   MF       T  + R +A+KPMNCPGH+ +FN GLKSYR+LP+R+
Sbjct: 303 VLWERSGHWDKYADAMFT------TSSENREYAIKPMNCPGHIQIFNQGLKSYRDLPLRM 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSGSLHG+MRVRGFTQDDAH+FCT++Q+  E      ++   Y  FGF+ 
Sbjct: 357 AEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTEDQIQQEVTSCIKMVYDTYTTFGFQN 416

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+VKLSTRPEKRVGSD +WD +E  +   L  ++      I   +  GEGAFYGPK E+ 
Sbjct: 417 IVVKLSTRPEKRVGSDEIWDKSEQALIDSLKAME------IPFEIQEGEGAFYGPKIEFT 470

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D + R WQCGT+Q+DFNLP+R  A YV   +E+  PVMIHRA+ GS+ERFIGI+IE +
Sbjct: 471 LYDCLDRAWQCGTVQLDFNLPTRLGATYVGESNERLIPVMIHRAILGSLERFIGILIEEY 530

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P Q +V  IT    +YA E+A  L+   +  + D RNE I +KIREH++K+
Sbjct: 531 AGFFPTWLAPEQVVVVNITDKQADYAHEVAQKLQKCGIRAKADLRNEKIGFKIREHTLKR 590

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P +++CGD+E     I +R        K  L D I  +  E
Sbjct: 591 VPYMLVCGDQEMEAGEIAVRTRKGKDLGKFKLDDFIKHIQAE 632


>gi|300924761|ref|ZP_07140703.1| threonyl-tRNA synthetase [Escherichia coli MS 182-1]
 gi|300419049|gb|EFK02360.1| threonyl-tRNA synthetase [Escherichia coli MS 182-1]
          Length = 642

 Score =  678 bits (1750), Expect = 0.0,   Method: Composition-based stats.
 Identities = 300/655 (45%), Positives = 433/655 (66%), Gaps = 19/655 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D  D +  +  +
Sbjct: 1   MPV---ITLPDGSQRHYDHAVSLMDVALDIGPGLAKACIAGRVNGELVDACDLIENDAQL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L +IRHSCAH++  A++ +WP  ++AIGP+I++GFYYD D ++  + +++
Sbjct: 58  SIITAKDEDGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVIDNGFYYDVDLDRTLTQEDV 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M E+  ++   +K+ +S  +ARE F ++ E+YKV IL E+I   +   LY   E
Sbjct: 118 EALEKRMHELAEKNYDVIKKKVSWHEARETFANRGESYKVSILDENIAHDDKPGLYFHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KLMK AGAYWRGDSN  ML RIYGTAW  ++ L  YL  L
Sbjct: 178 YVDMCRGPHVPNMRFCHHF-KLMKTAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF+ L  ++R K+K+  Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW+++GHWD+Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 297 FMMDRVLWEKTGHWDNYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+ +E      L+  +Y  
Sbjct: 351 LPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI+VKLSTRPEKR+GSD +WD AE  +   L+      ++ I     LGEGAFYGP
Sbjct: 411 FGFEKIVVKLSTRPEKRIGSDEMWDRAEADLAVALE------ENNIPFEYQLGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF+LPSR +A YV   +E+  PVMIHRA+ GS+ERFIGI
Sbjct: 465 KIEFTLYDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E F G  P WL+P+Q ++  IT S  +Y  E+   L +  + ++ D RNE I +KIRE
Sbjct: 525 LTEEFAGFFPTWLAPVQVVIMNITDSQSDYVNELTQKLSNAGIRVKADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           H+++++P +++CGDKE     + +R         + + + I  L +E      ++
Sbjct: 585 HTLRRVPYMLVCGDKEVQSGKVAVRTRRGKDLGSMDVNEVIEKLQQEIRSRSLKQ 639


>gi|165975675|ref|YP_001651268.1| threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
 gi|190149490|ref|YP_001968015.1| threonyl-tRNA synthetase ThrS [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|303251658|ref|ZP_07337831.1| threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|307251749|ref|ZP_07533652.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|307260677|ref|ZP_07542367.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           12 str. 1096]
 gi|307262809|ref|ZP_07544434.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           13 str. N273]
 gi|238687519|sp|B0BSM2|SYT_ACTPJ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|238692375|sp|B3H061|SYT_ACTP7 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|165875776|gb|ABY68824.1| threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
 gi|189914621|gb|ACE60873.1| threonyl-tRNA synthetase ThrS [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|302649500|gb|EFL79683.1| threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|306860750|gb|EFM92760.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|306869598|gb|EFN01385.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           12 str. 1096]
 gi|306871824|gb|EFN03543.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           13 str. N273]
          Length = 643

 Score =  678 bits (1750), Expect = 0.0,   Method: Composition-based stats.
 Identities = 293/641 (45%), Positives = 426/641 (66%), Gaps = 16/641 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS + F    +  +VA+SI   LAK  +A  +NG+  D  D +  + S+EIIT +
Sbjct: 4   ITLPDGSQRQFDNPVSVMEVAQSIGAGLAKATIAGRVNGERRDACDIISEDSSLEIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ ++P+V++AIGP I++GFYYD D ++  + ++L  IEK+
Sbjct: 64  DEDGLEIIRHSCAHLLGHAIKQLFPDVKMAIGPTIDNGFYYDVDLDRSLTQEDLDAIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K+ +S ++AR+ FE + E YK+ IL E+I       LY   E+ D+CR
Sbjct: 124 MLELAKTNYDVVKKRVSWQEARDTFEKRGEPYKMAILDENIERTATPALYHHEEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +      F KL KVAGAYWRGDS   ML RIYGTAW  +++L +YL  LEE+ KR
Sbjct: 184 GPHVPNMRFCHHF-KLQKVAGAYWRGDSKNKMLQRIYGTAWADKKQLAEYLTRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHR++ + +DL+H+ E+  G++FWH  GW IF+ L +++R K+K+ DY+E+  P ++D+ 
Sbjct: 243 DHRRIGKALDLYHMQEEAPGLVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW +Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWERTGHWQNYADLMFT------TQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+ +E      ++  IY  FGF  I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQIESEVTSCIRMVYDIYSTFGFSNI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPE R+G DA+WD AE+ +   L        + ++  +  GEGAFYGPK E+ L
Sbjct: 417 QVKLSTRPENRIGDDAMWDRAEDGLAKALTA------NGLSYEIQEGEGAFYGPKIEFAL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D + R+WQCGTIQ+DF LP R +A YV   + +  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 RDCLDREWQCGTIQLDFALPGRLDASYVAEDNGRRTPVMIHRAILGSIERFIGIITEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P QA+V  IT S  +Y Q++   L    +  ++D RNE + +K+REH+++++
Sbjct: 531 GFFPTWLAPTQAVVMNITDSQADYVQKVTKALSDAGIRAKSDLRNEKVGFKVREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P +++CGDKE     + +R          ++ + + IL  +
Sbjct: 591 PYMLVCGDKEIEAGKVSVRTRKGADLGTFTIDEFVEILKNQ 631


>gi|300914721|ref|ZP_07132037.1| Threonyl/alanyl tRNA synthetase SAD [Thermoanaerobacter sp. X561]
 gi|300889656|gb|EFK84802.1| Threonyl/alanyl tRNA synthetase SAD [Thermoanaerobacter sp. X561]
          Length = 634

 Score =  678 bits (1750), Expect = 0.0,   Method: Composition-based stats.
 Identities = 290/640 (45%), Positives = 410/640 (64%), Gaps = 16/640 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +   DG+ + F    T  ++ +SIS  LAK+AV    NGKV +L+  +  +G +EI+T +
Sbjct: 3   IILKDGTQREFEKGMTVYEIDKSISERLAKEAVGGKFNGKVVELNTKIEEDGKLEILTFD 62

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D     +  H+ +HI+A+AV+ ++ +V++AIGP I++GFYYDFD ++PF++++   IE++
Sbjct: 63  DEEGKKIYWHTSSHILAQAVKRLFKDVKLAIGPAIDNGFYYDFDTDRPFTTEDFEAIEQE 122

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M +II  D    +  L  ++A +L E K E YKVE++E IP  E ++ Y+QGE+ DLC G
Sbjct: 123 MNKIIKEDYKLERFVLPKDEAIKLMEEKGEPYKVELIEEIPEGEEISFYKQGEFTDLCAG 182

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PH+ STG VK   KL+ VAGAYW+GD    ML RIYG ++  +  L QYL+ LEE++KRD
Sbjct: 183 PHLMSTGMVKTI-KLLSVAGAYWKGDEKNKMLQRIYGISFLKKSMLDQYLHMLEEAKKRD 241

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHL 304
           HRKL +E+DLF I  +G G  F+H KG  I   L  + R   IK  Y+EI TP +L++ L
Sbjct: 242 HRKLGKELDLFSIHPEGPGFPFFHPKGMIIRNILEDFWRKEHIKHGYQEIKTPIILNEEL 301

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHWD Y+ NM+       T  D  T+A+KPMNCPG + V+   + SYR+LP+RL E
Sbjct: 302 WRRSGHWDHYKENMYF------TEIDGETYAIKPMNCPGAMLVYKSTMHSYRDLPLRLCE 355

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
            G V+R+E SG LHGLMRVR FTQDDAH+F T EQ+ +E L + NL+   YK FGFE   
Sbjct: 356 LGLVHRHELSGVLHGLMRVRSFTQDDAHLFMTPEQVEDEILGVINLVDYFYKIFGFEYF- 414

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           V+LSTRPE  +GSD  W+ A N +   L+ +       +   V  G+GAFYGPK ++ LK
Sbjct: 415 VELSTRPENSMGSDEDWELATNALISALNRVN------LPYKVNEGDGAFYGPKIDFHLK 468

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D+IGR WQCGTIQ+DF +P RF   Y+    EK  P+M+HR ++GSIERFIGI+ E+F G
Sbjct: 469 DSIGRTWQCGTIQLDFQMPERFELEYIGPDGEKHRPIMLHRVIYGSIERFIGILTEHFAG 528

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P WL+P+Q  V  I+     YAQ +   L  + +  E D RNE + YKIRE  ++KIP
Sbjct: 529 AFPTWLAPVQVRVLPISDKHYAYAQNVYGRLLENDIRAELDERNEKVGYKIREAQLQKIP 588

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            ++I GDKE  + ++ +R         +SL + I  + KE
Sbjct: 589 YMLIVGDKEVEQGTVSLRSRKEGDLGAISLSEFIEKILKE 628


>gi|258623264|ref|ZP_05718271.1| threonyl-tRNA synthetase [Vibrio mimicus VM573]
 gi|262173542|ref|ZP_06041219.1| threonyl-tRNA synthetase [Vibrio mimicus MB-451]
 gi|258584450|gb|EEW09192.1| threonyl-tRNA synthetase [Vibrio mimicus VM573]
 gi|261890900|gb|EEY36887.1| threonyl-tRNA synthetase [Vibrio mimicus MB-451]
          Length = 642

 Score =  678 bits (1750), Expect = 0.0,   Method: Composition-based stats.
 Identities = 298/642 (46%), Positives = 426/642 (66%), Gaps = 17/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS ++F    +  +VA+SI   LAK  +A  +NG   D  D +  + S+EIIT +
Sbjct: 4   ITLPDGSQRHFDNPVSTLEVAQSIGPGLAKATIAGRVNGARVDACDLIEHDASLEIITTK 63

Query: 66  DP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  A++ ++P  ++AIGP I+ GFYYD D EQ  S ++L +IE 
Sbjct: 64  DEVDGLEIVRHSCAHLLGHALKQLYPNAKMAIGPTIDSGFYYDIDLEQSLSQEDLEKIEA 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLC 183
           +M E+       +K+ +S ++AR+ FES+ E+YK+EIL E++   +   LY   E+ D+C
Sbjct: 124 RMVELAKTKYAVVKKKVSWQEARDTFESRGESYKMEILDENVARDDRPGLYHHEEYIDMC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV   G  + F KL+ +AGAYWRG+S+  ML RIYGTA++ ++ L  +L  LEE+ K
Sbjct: 184 RGPHVPHMGFCQNF-KLLNIAGAYWRGNSDNKMLQRIYGTAFHDKKALQAHLTRLEEAAK 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRK+ +++DLFH+ ++  G++FWH  GW IF+ L  ++R+K+ +  Y+E+  P ++D+
Sbjct: 243 RDHRKIGKQLDLFHMQQEAPGMVFWHHNGWSIFRDLEIFIRQKLNEYGYQEVKGPLMMDR 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y   MF       T  + R +A+KPMNCPGH+ +FN GLKSYR+LP+R+
Sbjct: 303 VLWERSGHWDKYADAMFT------TSSENREYAIKPMNCPGHIQIFNQGLKSYRDLPLRM 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSGSLHG+MRVRGFTQDDAH+FCT++Q+  E      ++   Y  FGF+ 
Sbjct: 357 AEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTEDQIQQEVTSCIKMVYDTYTTFGFQN 416

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+VKLSTRPEKRVGSD +WD +E  +   L  ++      I   +  GEGAFYGPK E+ 
Sbjct: 417 IVVKLSTRPEKRVGSDEIWDKSEQALIDSLKAME------IPFEIQEGEGAFYGPKIEFT 470

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D + R WQCGT+Q+DFNLP+R  A YV   +E+  PVMIHRA+ GS+ERFIGI+IE +
Sbjct: 471 LYDCLDRAWQCGTVQLDFNLPTRLGATYVGESNERLIPVMIHRAILGSLERFIGILIEEY 530

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P QA+V  IT    +YA E+A  L+   +  + D RNE I +KIREH++K+
Sbjct: 531 AGFFPTWLAPEQAVVVNITDKQADYAHEVAQKLQKCGIRAKADLRNEKIGFKIREHTLKR 590

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P +++CGD+E     I +R        K  L D I  +  E
Sbjct: 591 VPYMLVCGDQEMEAGEIAVRTRKGKDLGKFKLDDFIKHIQAE 632


>gi|327393701|dbj|BAK11123.1| Threonyl-tRNA synthetase ThrS [Pantoea ananatis AJ13355]
          Length = 642

 Score =  678 bits (1750), Expect = 0.0,   Method: Composition-based stats.
 Identities = 288/647 (44%), Positives = 431/647 (66%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SI 59
           MP    +T PDGS +++    +  D+A  I   LAK  +A  +NG++ D  DP+ +  S+
Sbjct: 1   MPV---ITLPDGSQRSYDRPVSVMDIALDIGPGLAKACIAGRVNGELVDAVDPITDDASV 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L +IRHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D ++  + +++
Sbjct: 58  AIITAKDEAGLEIIRHSCAHLLGHAIKQLWPDTKMAIGPVIDNGFYYDVDIDRTLTQEDI 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M ++   +   +K+ +S ++AR++F ++ E YK  IL E+I   +   LY   E
Sbjct: 118 ELLEKRMHQLAETNYDVVKKKVSWQEARDVFAARGEVYKTTILDENISHDDRPGLYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KL K++GAYWRGDS+  ML RIYGTAW  +++L  YL  L
Sbjct: 178 YVDMCRGPHVPNMRFCHHF-KLQKISGAYWRGDSDNKMLQRIYGTAWADKKQLAAYLQRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF+ L  ++R K+K+  Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW+++GHW++Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 297 FMMDRVLWEKTGHWENYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT++Q+  E      ++  +Y  
Sbjct: 351 LPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEDQLRTEVNSCIRMVYDMYST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI+VKLSTRPEKR+GSD  WD AE  +   L+      ++ I      GEGAFYGP
Sbjct: 411 FGFEKIVVKLSTRPEKRIGSDETWDRAEEDLAAALN------ENNIEFEYQPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF+LP R +A YV  ++++  PVMIHRA+ GS+ERFIGI
Sbjct: 465 KIEFTLYDCLDRAWQCGTVQLDFSLPKRLDATYVGENNDRQTPVMIHRAILGSMERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E F G  P WL+P+QA+V  IT    EY + +   L++  + ++ D RNE I +KIRE
Sbjct: 525 LTEEFAGFFPSWLAPMQAVVMNITDGQAEYVETLTRKLQNAGIRVKADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H+++++P +++CGDKE     + +R         + +   +  L +E
Sbjct: 585 HTLRRVPYMLVCGDKEVEAGKVAVRTRRGKDLGSMDVDVFVEKLQQE 631


>gi|324119204|gb|EGC13092.1| threonyl-tRNA synthetase [Escherichia coli E1167]
          Length = 642

 Score =  678 bits (1750), Expect = 0.0,   Method: Composition-based stats.
 Identities = 302/655 (46%), Positives = 434/655 (66%), Gaps = 19/655 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D  D +  +  +
Sbjct: 1   MPV---ITLPDGSQRHYDHAVSPMDVALDIGPGLAKACIAGRVNGELVDACDLIENDAQL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D  SL +IRHSCAH++  A++ +WP  ++AIGP+I++GFYYD D ++  + +++
Sbjct: 58  SIITAKDEDSLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVIDNGFYYDVDLDRTLTQEDV 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M E+  ++   +K+ +S  +ARE F ++ E+YKV IL E+I   +   LY   E
Sbjct: 118 EALEKRMHELAEKNYDVIKKKVSWHEARETFANRGESYKVSILDENIAHDDKPGLYFHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KLMK AGAYWRGDSN  ML RIYGTAW  ++ L  YL  L
Sbjct: 178 YVDMCRGPHVPNMRFCHHF-KLMKTAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF+ L  ++R K+K+  Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW+++GHWD+Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 297 FMMDRVLWEKTGHWDNYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+ +E      L+  +Y  
Sbjct: 351 LPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI+VKLSTRPEKR+GSD +WD AE  +   L+      ++ I     LGEGAFYGP
Sbjct: 411 FGFEKIVVKLSTRPEKRIGSDEMWDRAEADLAVALE------ENNIPFEYQLGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF+LPSR +A YV   +E+  PVMIHRA+ GS+ERFIGI
Sbjct: 465 KIEFTLYDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E F G  P WL+P+Q ++  IT S  EY  E+   L +  + ++ D RNE I +KIRE
Sbjct: 525 LTEEFAGFFPTWLAPVQVVIMNITDSQSEYVNELTQKLSNAGIRVKADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           H+++++P +++CGDKE     + +R         + + + I  L +E      ++
Sbjct: 585 HTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSMDVNEVIEKLQQEIRSRSLKQ 639


>gi|33152811|ref|NP_874164.1| threonyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
 gi|71153574|sp|Q7VKR9|SYT_HAEDU RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|33149036|gb|AAP96553.1| threonyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
          Length = 643

 Score =  678 bits (1750), Expect = 0.0,   Method: Composition-based stats.
 Identities = 299/648 (46%), Positives = 434/648 (66%), Gaps = 16/648 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS +NF    +  +VA+SI   LAK  +A  +NG+  D  D +  + ++EIIT +
Sbjct: 4   ITLPDGSQRNFDNPVSVIEVAQSIGTGLAKATIAGRVNGERRDACDIIEQDSTLEIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ ++P V++AIGP IE+GFYYD D ++  + D+L  IEK+
Sbjct: 64  DEDGLEIIRHSCAHLLGHAIKQLFPTVKMAIGPTIENGFYYDVDLDRTLTQDDLEAIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K+ +S ++AR+ FE + E YK+ IL E+I       LY   E+ D+CR
Sbjct: 124 MLELAKTNYNVVKKPVSWQQARDTFEKRGEPYKIAILDENIERTATPALYHHEEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +    + F KL KVAGAYWRGDS   ML RIYGTAW  +++LT+YL  LEE+ KR
Sbjct: 184 GPHVPNMRFCQHF-KLQKVAGAYWRGDSKNKMLQRIYGTAWADKKQLTEYLTRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHR++ + +DL+H+ E+  G++FWH  GW IF+ L +++R K+K+ DY+E+  P ++D+ 
Sbjct: 243 DHRRIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW +Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWERTGHWQNYADLMFT------TQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++  IY  FGF  I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIESEVTACIKMVYDIYSTFGFTNI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRP+ R+G+D +WD AE  +   L      S + +   +  GEGAFYGPK E+ L
Sbjct: 417 FVKLSTRPDNRIGADDMWDRAEAGLSAAL------SANGLEYQIQHGEGAFYGPKIEFAL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D +GR+WQCGT+Q+DF LPSR +A YV   + +  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 RDCLGREWQCGTVQLDFALPSRLDASYVTEDNSRHTPVMIHRAILGSIERFIGIITEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P+WL+PIQA+V  IT S  +Y Q++   L    L ++ D RNE + +K+REH+++++
Sbjct: 531 GFFPVWLAPIQAVVMNITDSQADYVQQVVKQLSDAGLRVKADLRNEKVGFKVREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           P +++CGDKE +E  + +R          ++   + +L  +    + +
Sbjct: 591 PYMLVCGDKEITEGKVSVRTRKGEDLGTFNIEAFVEMLKAQVKTRELK 638


>gi|308067332|ref|YP_003868937.1| Threonyl-tRNA synthetase 2 (threonine--tRNA ligase) (ThrRS)
           [Paenibacillus polymyxa E681]
 gi|305856611|gb|ADM68399.1| Threonyl-tRNA synthetase 2 (Threonine--tRNA ligase) (ThrRS)
           [Paenibacillus polymyxa E681]
          Length = 637

 Score =  678 bits (1750), Expect = 0.0,   Method: Composition-based stats.
 Identities = 284/645 (44%), Positives = 424/645 (65%), Gaps = 18/645 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEII 62
            I++  PDG+++ +    T +DVA SIS  L K AVA  +NGK  DL+  + +   +EII
Sbjct: 2   SIQVKLPDGAVREYEQGVTIADVAGSISSGLKKNAVAGKVNGKAVDLNTVLDQNVDLEII 61

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPE--VQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           T +    L + RHS AH++A+A++ I+ E  V++ IGP+I+ GFYYD D E P S D+LA
Sbjct: 62  TLDGADGLEIYRHSTAHLLAQALKRIYGEKNVKLGIGPVIDSGFYYDIDIENPLSVDDLA 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IEK+M +I   + P  ++ +S E+A  +F   ++  K+E++  +P +  +T+Y QGE+F
Sbjct: 122 KIEKEMTKIAQENLPITRRVVSREEATRIFGELEDPLKLELIRDLPEEAEITIYDQGEFF 181

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ STG++K F KL+ VAGAYWRGDSN  ML RIYGTA+  + +L ++L+ LEE
Sbjct: 182 DLCRGPHLPSTGRIKAF-KLLSVAGAYWRGDSNNKMLQRIYGTAFPKKAQLDEHLHLLEE 240

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           ++KRDHRKL +E++LF  +E+  G+ F+  KG  +   L  Y R  +    YEE+ TP +
Sbjct: 241 AKKRDHRKLGKELELFMFSEEAPGMPFYLPKGMVVRTALEDYSRDIQRLHGYEEVRTPLM 300

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           ++  LW+QSGH++ Y+ NM+  +       D  TFALKPMNCPGH+ VF + L SYR+LP
Sbjct: 301 MNNRLWEQSGHYEHYKENMYFSEV------DETTFALKPMNCPGHMLVFKNELHSYRDLP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AEFG V+R+E SG+L+G+MRVR F QDDAH+F T  Q+  E   +  LI  +Y  FG
Sbjct: 355 IRIAEFGQVHRHELSGALNGMMRVRTFCQDDAHIFVTPGQIEQEITDVIKLINEMYSVFG 414

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F    V+LSTRP+  +G  ALWD AE  ++ VLD +       IN  +  G+GAFYGPK 
Sbjct: 415 F-DFTVELSTRPDDFMGEPALWDQAEQALQNVLDHLG------INYRINAGDGAFYGPKI 467

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           ++ + DA+ R WQCGTIQ+DF +P +F+  YV   ++K  PV+IHRA++GSI+RF+GI+ 
Sbjct: 468 DFHILDALKRSWQCGTIQLDFQMPEKFDLTYVGEDNQKHRPVVIHRAIYGSIDRFMGILT 527

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E+F G  PLWL+P+ A +  ++ + +E A EI + L    L +E D RNE + YKIRE  
Sbjct: 528 EHFTGAFPLWLAPVHAKLLPVSENYIETANEIQDALLKAGLRVEVDTRNEKLGYKIREAQ 587

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           ++K+P + + G+ E +  ++ +R+ G      +S+ D +  ++ E
Sbjct: 588 LEKVPYMFVIGENEKTTGTVAVRKRGEGDLGSLSIADIVEKISTE 632


>gi|262164341|ref|ZP_06032079.1| threonyl-tRNA synthetase [Vibrio mimicus VM223]
 gi|262026721|gb|EEY45388.1| threonyl-tRNA synthetase [Vibrio mimicus VM223]
          Length = 642

 Score =  678 bits (1750), Expect = 0.0,   Method: Composition-based stats.
 Identities = 299/642 (46%), Positives = 425/642 (66%), Gaps = 17/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS ++F    +  +VA+SI   LAK  +A  +NG   D  D +  + S+EIIT +
Sbjct: 4   ITLPDGSQRHFDNPVSTLEVAQSIGPGLAKATIAGRVNGARVDACDLIEHDASLEIITTK 63

Query: 66  DP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  A++ ++P  ++AIGP I+ GFYYD D EQ  S ++L +IE 
Sbjct: 64  DEVDGLEIVRHSCAHLLGHALKQLYPNAKMAIGPTIDSGFYYDIDLEQSLSQEDLEKIEA 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLC 183
           +M E+       +K+ +S ++AR+ FES+ E+YK+EIL E++   +   LY   E+ D+C
Sbjct: 124 RMVELAKTKYAVVKKKVSWQEARDTFESRGESYKMEILDENVARDDRPGLYHHEEYIDMC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV   G  + F KL+ VAGAYWRG+S+  ML RIYGTA++ ++ L  +L  LEE+ K
Sbjct: 184 RGPHVPHMGFCQNF-KLLNVAGAYWRGNSDNKMLQRIYGTAFHDKKALQAHLTRLEEAAK 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRK+ +++DLFH+ ++  G++FWH  GW IF+ L  ++R+K+ +  Y+E+  P ++D+
Sbjct: 243 RDHRKIGKQLDLFHMQQEAPGMVFWHHNGWSIFRDLEIFIRQKLNEYGYQEVKGPLMMDR 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y   MF       T  + R +A+KPMNCPGH+ +FN GLKSYR+LP+R+
Sbjct: 303 VLWERSGHWDKYADAMFT------TSSENREYAIKPMNCPGHIQIFNQGLKSYRDLPLRM 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSGSLHG+MRVRGFTQDDAH+FCT++Q+  E      ++   Y  FGF+ 
Sbjct: 357 AEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTEDQIQQEVTSCIKMVYDTYTTFGFQN 416

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+VKLSTRPEKRVGSD +WD +E  +   L  +       I   +  GEGAFYGPK E+ 
Sbjct: 417 IVVKLSTRPEKRVGSDEIWDKSEQALIDSLKAM------DIPFEIQEGEGAFYGPKIEFT 470

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D + R WQCGT+Q+DFNLP+R  A YV   +E+  PVMIHRA+ GS+ERFIGI+IE +
Sbjct: 471 LYDCLDRAWQCGTVQLDFNLPTRLGATYVGESNERLIPVMIHRAILGSLERFIGILIEEY 530

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P QA+V  IT    +YA E+A  L+   +  + D RNE I +KIREH++K+
Sbjct: 531 AGFFPTWLAPEQAVVVNITDKQADYAHEVAQKLQKCGIRAKADLRNEKIGFKIREHTLKR 590

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P +++CGD+E     I +R        K  L D I  +  E
Sbjct: 591 VPYMLVCGDQEMEAGEIAVRTRKGKDLGKFKLDDFIKHIQAE 632


>gi|56696171|ref|YP_166527.1| threonyl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
 gi|73919826|sp|Q5LTX8|SYT_SILPO RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|56677908|gb|AAV94574.1| threonyl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
          Length = 648

 Score =  678 bits (1750), Expect = 0.0,   Method: Composition-based stats.
 Identities = 330/652 (50%), Positives = 437/652 (67%), Gaps = 10/652 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
           + I LTFPDG+ +++    T + VA  IS SLAKKA++  ++GK  DL  P+  +  I I
Sbjct: 2   AQISLTFPDGNARSYDAGVTPAQVAADISTSLAKKAISATVDGKHWDLQWPIATDAQIAI 61

Query: 62  ITPEDP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            T  D  ++  ++RH  AHIMA AVQ IWP  +V IGP+IE+G+YYDFD+ +PF+ ++L 
Sbjct: 62  HTMADEAQANELVRHDLAHIMARAVQEIWPATKVTIGPVIENGWYYDFDRAEPFTPEDLG 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEKKM+EII +  P   +     +A E +++  E YKVE++E+IP  E + +Y  G W 
Sbjct: 122 LIEKKMKEIINKREPVTTEVWERTRAIEFYKANNEPYKVELIEAIPGTEPIRMYWHGHWQ 181

Query: 181 DLCRGPHVRSTGQ-VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           DLCRGPH++ TGQ     FKLM +AGAYWRGDSNRPML RIYG A+  +++L  +L+ LE
Sbjct: 182 DLCRGPHLQHTGQVPGDAFKLMSIAGAYWRGDSNRPMLQRIYGVAFTGKEKLKAHLHMLE 241

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQ 298
           E+ KRDHRKL REMDLFH+ E+  G IFWH  GW I+ TL  YMRR+ +   Y E+NTPQ
Sbjct: 242 EAAKRDHRKLGREMDLFHMQEEAPGQIFWHPNGWTIYTTLQDYMRRQQRRGGYVEVNTPQ 301

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW+ SGHW+ Y+ NMF V+  ++  ++    ALKPMNCP HV +FN GLKSYR+L
Sbjct: 302 VVDRKLWEASGHWEKYQENMFIVEVDEEHAREKAVNALKPMNCPCHVQIFNQGLKSYRDL 361

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFGS  R EPSG+LHG+MRVRGFTQDD H+FC ++Q+ +E  +  + +  IYKD 
Sbjct: 362 PLRMAEFGSCNRYEPSGALHGIMRVRGFTQDDGHIFCAEDQIESETAEFIDFLSMIYKDL 421

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFEK  VK S RP+ R GSDA+WD AE  +              I   +  GEGAFYGPK
Sbjct: 422 GFEKFSVKFSDRPDTRAGSDAVWDKAEAALLSATRAAG------IEPELNPGEGAFYGPK 475

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E++L DAIGRDWQCGT QVDF LP R +A Y+ +   K  PVM+HRA  GS ERFIGI+
Sbjct: 476 LEFVLTDAIGRDWQCGTHQVDFVLPERLDATYIGADGAKHRPVMLHRATLGSFERFIGIL 535

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE   G LP WL+P Q +V +ITS A +Y +E+   L +  +  E D RNE INYK+REH
Sbjct: 536 IEEHAGKLPFWLAPRQVVVASITSEADDYVREVVAELCAAGVRAEADTRNEKINYKVREH 595

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDC 650
           S+ K+P+I+  G +E  ER++ +RR G   T   SL D    L + + PPD 
Sbjct: 596 SVGKVPVILAVGHREVEERTVSVRRLGEKQTSVQSLADVTIELGRAATPPDL 647


>gi|294010776|ref|YP_003544236.1| threonyl-tRNA synthetase [Sphingobium japonicum UT26S]
 gi|292674106|dbj|BAI95624.1| threonyl-tRNA synthetase [Sphingobium japonicum UT26S]
          Length = 668

 Score =  678 bits (1749), Expect = 0.0,   Method: Composition-based stats.
 Identities = 308/670 (45%), Positives = 423/670 (63%), Gaps = 21/670 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           M + +K+T PDGS++      T +D+A +I   LAK A+A  ++G++ D+  P+  +  +
Sbjct: 1   MSAMLKITLPDGSVREVAPGTTPADIAAAIGPGLAKAAIAARVDGELRDIMRPLEADAQL 60

Query: 60  EIITPEDP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD------KEQ 112
            ++T  D   +L + RH  AH++AEAVQ+++P  Q+  GP  +DGFYYDF       K +
Sbjct: 61  ALVTSRDEADALELARHDFAHVLAEAVQALFPGTQITFGPATDDGFYYDFAPPLVEGKPR 120

Query: 113 PFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVT 172
           PF+ ++L  IE KM+EIIA D P  ++    E     + +  E +K E    +P  E +T
Sbjct: 121 PFTEEDLPAIEAKMREIIAADKPLRREVWKREDLIARWRAGGETFKAEWAAELPEGEELT 180

Query: 173 LYRQG-EWFDLCRGPHVRSTGQVKKF-FKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQE 230
           +Y  G +W D+CRGPH+ STG++    FKL +V+GAYWRGD    MLSRIYGT W  +++
Sbjct: 181 VYWSGGDWLDMCRGPHLASTGKLDPAAFKLTRVSGAYWRGDQKNAMLSRIYGTGWLNRKQ 240

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-D 289
           L  +L  LEE+ +RDHRKL  EMDLFH+ ++  G +FWH KG+ I++ L +YMRR I   
Sbjct: 241 LDAHLTRLEEAARRDHRKLGAEMDLFHLQQEAHGSVFWHPKGYIIWRALEAYMRRAIDDA 300

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL--------RTFALKPMNC 341
            Y E+ TPQV+D   W+QSGHW  YR NMF +      ++D            ALKPMNC
Sbjct: 301 GYREVKTPQVMDARQWEQSGHWGKYRENMFVIPDEVPNVEDEGPLVSDDADWMALKPMNC 360

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
           P HV +F  G+KSYR+LP+R  E G  +RNEP G+LHGLMRVR FTQDDAH+FC ++Q+ 
Sbjct: 361 PAHVLIFRQGIKSYRDLPLRFYENGCCHRNEPHGALHGLMRVRQFTQDDAHIFCREDQIV 420

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E      L   IYKDFGF   + KL+ RPEKR GSDA+WD AEN ++  +      + +
Sbjct: 421 EEVRAFCALADRIYKDFGFTYSI-KLALRPEKRFGSDAMWDQAENELRDAVAAAGLDTPE 479

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
                 L GEGAFY PK E+ L DAIGR WQ GTIQ D  LP R +A YV    E+  PV
Sbjct: 480 Y-GWEELPGEGAFYAPKLEWHLTDAIGRTWQVGTIQSDRVLPERLDASYVGEDGERHRPV 538

Query: 522 MIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLS 581
           M+HRA+FGS ERFIGI+IE++ G  PLWL+P+QA+V TI S A  YA E+A  L++  + 
Sbjct: 539 MLHRAIFGSYERFIGILIEHYAGRFPLWLAPVQAVVATIVSDADGYAIEVAEKLRAAGIR 598

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            ETD RNE INYK+REHS+ K+P +++ G +EA E ++ +R  G      +S+ D I  L
Sbjct: 599 AETDLRNEKINYKVREHSLAKVPNLLVVGRREADEGTVALRELGKEGQSVLSVDDVIARL 658

Query: 642 TKESLPPDCQ 651
            KE+  PD +
Sbjct: 659 AKEARAPDMR 668


>gi|261212792|ref|ZP_05927076.1| threonyl-tRNA synthetase [Vibrio sp. RC341]
 gi|260837857|gb|EEX64534.1| threonyl-tRNA synthetase [Vibrio sp. RC341]
          Length = 642

 Score =  678 bits (1749), Expect = 0.0,   Method: Composition-based stats.
 Identities = 298/642 (46%), Positives = 425/642 (66%), Gaps = 17/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS ++F    +  +VA+SI   LAK  +A  +NG   D  D +  + S+EIIT +
Sbjct: 4   ITLPDGSQRHFDNPVSTLEVAQSIGPGLAKATIAGRVNGARVDACDLIEHDASLEIITTK 63

Query: 66  DP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  A++ ++P  ++AIGP I+ GFYYD D EQ  S ++L +IE 
Sbjct: 64  DEVDGLEIVRHSCAHLLGHALKQLYPNAKMAIGPTIDSGFYYDIDLEQSLSQEDLEKIEA 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLC 183
           +M E+       +K+ +S ++AR+ FES+ E+YK+EIL E++   +   LY   E+ D+C
Sbjct: 124 RMVELAKTKYAVVKKKVSWQEARDTFESRGESYKMEILDENVARDDRPGLYHHEEYIDMC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV   G  + F KL+ +AGAYWRG+S+  ML RIYGTA++ ++ L  +L  LEE+ K
Sbjct: 184 RGPHVPHMGFCQNF-KLLNIAGAYWRGNSDNKMLQRIYGTAFHDKKALQAHLTRLEEAAK 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRK+ +++DLFH+ ++  G++FWH  GW IF+ L  ++R+K+ +  Y+E+  P ++D+
Sbjct: 243 RDHRKIGKQLDLFHMQQEAPGMVFWHHNGWSIFRDLEIFIRQKLNEYGYQEVKGPLMMDR 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y   MF       T  + R +A+KPMNCPGH+ +FN GLKSYR+LP+R+
Sbjct: 303 VLWERSGHWDKYADAMFT------TSSENREYAIKPMNCPGHIQIFNQGLKSYRDLPLRM 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSGSLHG+MRVRGFTQDDAH+FCT++Q+  E      ++   Y  FGF+ 
Sbjct: 357 AEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTEDQIQQEVTSCIKMVYDTYTTFGFQN 416

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+VKLSTRPEKRVGSD +WD +E  +   L  +       I   +  GEGAFYGPK E+ 
Sbjct: 417 IVVKLSTRPEKRVGSDEIWDKSEQALIDSLKAM------DIPFEIQEGEGAFYGPKIEFT 470

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D + R WQCGT+Q+DFNLP+R  A YV   +E+  PVMIHRA+ GS+ERFIGI+IE +
Sbjct: 471 LYDCLDRAWQCGTVQLDFNLPTRLGATYVGESNERLIPVMIHRAILGSLERFIGILIEEY 530

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P QA+V  IT    +YA E+A  L+   +  + D RNE I +KIREH++K+
Sbjct: 531 AGFFPTWLAPEQAVVVNITDKQADYAHEVAQKLQKCGIRAKADLRNEKIGFKIREHTLKR 590

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P +++CGD+E     I +R        K  L D I  +  E
Sbjct: 591 VPYMLVCGDQEMEAGEIAVRTRKGKDLGKFKLDDFIEHIQAE 632


>gi|325497120|gb|EGC94979.1| threonyl-tRNA synthetase [Escherichia fergusonii ECD227]
          Length = 652

 Score =  678 bits (1749), Expect = 0.0,   Method: Composition-based stats.
 Identities = 300/655 (45%), Positives = 432/655 (65%), Gaps = 19/655 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D  D +  +  +
Sbjct: 11  MPV---ITLPDGSQRHYDHAVSPMDVALDIGPGLAKACIAGRVNGELVDACDLIENDAQL 67

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L +IRHSCAH++  A++ +WP  ++AIGP+I++GFYYD D ++  + +++
Sbjct: 68  AIITAKDEEGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVIDNGFYYDVDLDRTLTQEDV 127

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M E+  ++   +K+ +S  +ARE F  + E+YKV IL E+I   +   LY   E
Sbjct: 128 EALEKRMHELAEKNYDVIKKKVSWHEARETFVKRGESYKVSILDENIAHDDQPGLYFHEE 187

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KLMK AGAYWRGDSN  ML RIYGTAW  ++ L  YL  L
Sbjct: 188 YVDMCRGPHVPNMRFCHHF-KLMKTAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRL 246

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF+ L  ++R K+K+  Y+E+  P
Sbjct: 247 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRTKLKEYQYQEVKGP 306

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW+++GHW++Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 307 FMMDRVLWEKTGHWENYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRD 360

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+ +E      L+  +Y  
Sbjct: 361 LPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYST 420

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI+VKLSTRPEKR+GSD +WD AE  +   L+      ++ I     LGEGAFYGP
Sbjct: 421 FGFEKIVVKLSTRPEKRIGSDEMWDRAEADLAVALE------ENNIPFEYQLGEGAFYGP 474

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF+LPSR +A YV   +E+  PVMIHRA+ GS+ERFIGI
Sbjct: 475 KIEFTLYDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGI 534

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E F G  P WL+P+Q ++  IT S  EY  E+   L +  + ++ D RNE I +KIRE
Sbjct: 535 LTEEFAGFFPTWLAPVQVVIMNITDSQSEYVNELTQKLSNAGIRVKADLRNEKIGFKIRE 594

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           H+++++P +++CGDKE     + +R         + + + I  L +E      ++
Sbjct: 595 HTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSMDVNEVIEKLQQEIRSRSLKQ 649


>gi|238927112|ref|ZP_04658872.1| threonine--tRNA ligase [Selenomonas flueggei ATCC 43531]
 gi|238885092|gb|EEQ48730.1| threonine--tRNA ligase [Selenomonas flueggei ATCC 43531]
          Length = 639

 Score =  678 bits (1749), Expect = 0.0,   Method: Composition-based stats.
 Identities = 296/653 (45%), Positives = 420/653 (64%), Gaps = 19/653 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            +KLT PDGS++      T  DV + +S SLAKKA+A +++G+V DL+ PV ++ ++ ++
Sbjct: 1   MVKLTLPDGSVREAEAGTTILDVVKGMSNSLAKKALAASLDGEVVDLTTPVTKDAALRVL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPE--VQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           T ED      +RH+ AH+MA+AV+ ++PE  VQ+AIGP IE+GFYYDFD E   +  +L 
Sbjct: 61  TFEDEGGRHALRHTAAHVMAQAVKRLYPESNVQLAIGPAIENGFYYDFDMEHQLTDADLH 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IEK+M++I+  + P +++ +S   A  LF  K E YKVE++E +P    ++LY QGE+ 
Sbjct: 121 EIEKEMKKIVKENFPLVRREISRADAIALFREKGENYKVELIEDLPENAVISLYTQGEFT 180

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLC GPHV STG+VK F KL  VAGAYWRG     ML RIYGTA+  Q+EL  YL+ LEE
Sbjct: 181 DLCAGPHVASTGKVKAF-KLQSVAGAYWRGSEKNKMLQRIYGTAFEKQEELDAYLHMLEE 239

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           + KRDHRKL +E+DLF + E+G G  F+H  G  +   L+ Y R    +  Y+EI+TP +
Sbjct: 240 AAKRDHRKLGKELDLFSLHEEGPGFPFFHPNGMALRNALLDYWREVHRRYGYQEISTPVI 299

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           L + LW+ SGHW  YR NM+       T  D   +A+KPMNCPG + V+   L SYR+LP
Sbjct: 300 LSRKLWETSGHWFHYRENMYT------TEIDDEDYAIKPMNCPGCMLVYRSQLHSYRDLP 353

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +RLAE G V+R+E SG+LHGL RVR FTQDDAH+F T +Q+  E     +L   +Y+ FG
Sbjct: 354 LRLAELGLVHRHELSGALHGLFRVRNFTQDDAHLFVTPDQIEGEIQHTIDLFDEVYRTFG 413

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
                 +LSTRPE  +G+D +W+ A N ++  LD         ++  V  G+GAFYGPK 
Sbjct: 414 LTY-KAELSTRPEDSMGTDEMWELATNGLQKALD------NRGLDYVVNEGDGAFYGPKI 466

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           ++ L+D+IGR WQCGTIQ+D +LP +F+  YV    EK  PVM+HR V+GSIERFIGI+I
Sbjct: 467 DFHLRDSIGRTWQCGTIQLDMSLPEKFDLTYVGEDGEKHRPVMLHRVVYGSIERFIGILI 526

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           EN+ G  P+W++P+Q  +  IT    EYA+++   +    + +E D RNE   YKIRE  
Sbjct: 527 ENYAGAFPVWMAPVQVRILPITERHAEYAEKLYKKMFDCGIRVEIDERNEKTGYKIRESQ 586

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           +KK P  I+ GD+E    ++ +R++G   +  +S  D I  L +E +    Q+
Sbjct: 587 VKKTPYTIVVGDQEQESGTVAMRKYGEKNSTTMSSDDFIA-LVQEKIATRAQE 638


>gi|219666254|ref|YP_002456689.1| threonyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
 gi|219536514|gb|ACL18253.1| threonyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
          Length = 639

 Score =  678 bits (1749), Expect = 0.0,   Method: Composition-based stats.
 Identities = 277/644 (43%), Positives = 413/644 (64%), Gaps = 17/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            +K+T  DGSI+      +  ++A SISR LAK A+A  +NG+V DLS  + ++  +EII
Sbjct: 2   MVKITLKDGSIREIESGKSLMELAASISRGLAKAALAGKVNGEVKDLSYALTQDAEVEII 61

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +    L ++RHS +H+MAEAV++++P   + IGP I++GFYYDFD E  F+ ++L +I
Sbjct: 62  TADSEEGLKILRHSTSHLMAEAVRNLFPGTILGIGPAIDNGFYYDFDSEHVFTPEDLEKI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M+ ++  +  + ++ +S   A + F ++ E YKVE++E +P  E +++Y QG + DL
Sbjct: 122 EAEMRRLVKENKRYERKEISRSDALQYFSAEGEKYKVELIEDLPEDEVISMYTQGGFTDL 181

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPH+ STG VK F KLM +AGAYWRG     ML RIYGT W  +++L  YL+ LEE++
Sbjct: 182 CAGPHIPSTGVVKAF-KLMNLAGAYWRGSEKNKMLQRIYGTVWAKKEDLDDYLFKLEEAK 240

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD 301
           +RDHRKL  E+DLF + ++G G  F+H KG  +   L  + R++ +   Y EI TP +L 
Sbjct: 241 RRDHRKLGVELDLFSLHDEGPGFPFFHPKGMVLRNQLEDFWRQEHRKRGYHEIKTPIILS 300

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           ++LW+ SGHWD Y+ NM+  K       D   FA+KPMNCPG + ++   L+SYR+LP+R
Sbjct: 301 RNLWENSGHWDHYKDNMYTTKI------DDEDFAVKPMNCPGGMIMYKQKLRSYRDLPLR 354

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           + E G V+R+E SG+L+GL+RVR FTQDDAH+F    Q+  E   + +L+   YK FGFE
Sbjct: 355 MGELGLVHRHELSGALNGLLRVRNFTQDDAHIFMLPSQIKAEISGVIDLVDRFYKVFGFE 414

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPE  +G+D  W+ A N ++  L+         +N  +  G+GAFYGPK ++
Sbjct: 415 YH-VELSTRPENSMGADETWEMATNALQEALEA------KGVNYKINPGDGAFYGPKIDF 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L+D +GR WQCGTIQ+DF +P +F+  Y+    +K  PVMIHR V+GSIERFI ++ E+
Sbjct: 468 HLRDCLGRTWQCGTIQLDFQMPEKFDLTYIGEDGQKHRPVMIHRVVYGSIERFIALLTEH 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  P WL+P+Q  V  I+    +YAQ+I   L    +  E D R E I+YKIRE    
Sbjct: 528 YAGAFPTWLAPVQVRVLPISERHEDYAQDIVRRLNDLDIRAEVDERREKISYKIREAQTH 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQ-KVSLLDAIPILTKE 644
           KIP  ++ GD+EA   ++ +RR+G      K+S+ + I ++ +E
Sbjct: 588 KIPFALVVGDQEAETDTVAVRRYGQANAGEKLSVAEFIALIQEE 631


>gi|188533977|ref|YP_001907774.1| threonyl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
 gi|238689736|sp|B2VEM1|SYT_ERWT9 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|188029019|emb|CAO96887.1| Threonyl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
          Length = 642

 Score =  678 bits (1749), Expect = 0.0,   Method: Composition-based stats.
 Identities = 292/647 (45%), Positives = 429/647 (66%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP    +T PDGS ++F    +  D+A  I   LAK  +A  +NG++ D  DP+  + S+
Sbjct: 1   MPV---ITLPDGSQRSFDHAVSVMDIAMDIGPGLAKACIAGRVNGELVDAVDPIVDDASV 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L +IRHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D ++  + +++
Sbjct: 58  AIITAKDEAGLEIIRHSCAHLLGHAIKQLWPDTKMAIGPVIDNGFYYDVDLDRTLTQEDI 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M ++   +   +K+ +S ++AR+ F ++ E YK  IL E+I   +   LY   E
Sbjct: 118 ELLEKRMHQLAETNYDVIKKKVSWQEARDAFAARGENYKTTILDENISHDDRPGLYHHQE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KL K++GAYWRGDSN  ML RIYGTAW  +++L  YL  L
Sbjct: 178 YVDMCRGPHVPNMRFCHHF-KLQKISGAYWRGDSNNKMLQRIYGTAWADKKQLAAYLLRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF+ L  ++R K+K+ +Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRTKLKEYEYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW+++GHW++Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 297 FMMDRVLWEKTGHWENYKEAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  
Sbjct: 351 LPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQVRDEVNSCIKMVYDMYST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI+VKLSTRPEKR+GSD LWD +E  +   L       ++ I      GEGAFYGP
Sbjct: 411 FGFEKIVVKLSTRPEKRIGSDDLWDRSEADLAAALK------ENGIPFEYQPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF+LP R +A YV   +E+  PVMIHRA+ GS+ERFIGI
Sbjct: 465 KIEFTLHDCLDRAWQCGTVQLDFSLPGRLSASYVGESNERQVPVMIHRAILGSMERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E + G  P WL+P+Q +V  IT    EY  E+   L++  +  + D RNE I +KIRE
Sbjct: 525 LTEEYAGFFPTWLAPVQVVVMNITDGQSEYVAELTRKLQNAGIRAKADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H+++++P +++CGDKE     + +R         + + + I  L  E
Sbjct: 585 HTLRRVPYMLVCGDKEVEAGKVAVRTRRGKDLGSIDVNEVIAKLQDE 631


>gi|169797157|ref|YP_001714950.1| threonyl-tRNA synthetase [Acinetobacter baumannii AYE]
 gi|184156915|ref|YP_001845254.1| threonyl-tRNA synthetase [Acinetobacter baumannii ACICU]
 gi|215484620|ref|YP_002326855.1| threonyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
 gi|239500701|ref|ZP_04660011.1| threonyl-tRNA synthetase [Acinetobacter baumannii AB900]
 gi|301510743|ref|ZP_07235980.1| threonyl-tRNA synthetase [Acinetobacter baumannii AB058]
 gi|332856896|ref|ZP_08436305.1| threonine--tRNA ligase [Acinetobacter baumannii 6013150]
 gi|332867201|ref|ZP_08437466.1| threonine--tRNA ligase [Acinetobacter baumannii 6013113]
 gi|332874008|ref|ZP_08441943.1| threonine--tRNA ligase [Acinetobacter baumannii 6014059]
 gi|226701398|sp|B7H005|SYT_ACIB3 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|238685492|sp|A3M299|SYT_ACIBT RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|238688031|sp|B0V5P2|SYT_ACIBY RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|238690968|sp|B2HTH0|SYT_ACIBC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|169150084|emb|CAM87978.1| threonyl-tRNA synthetase [Acinetobacter baumannii AYE]
 gi|183208509|gb|ACC55907.1| Threonyl-tRNA synthetase [Acinetobacter baumannii ACICU]
 gi|193076379|gb|ABO11043.2| threonyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978]
 gi|213985706|gb|ACJ56005.1| threonyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
 gi|322506811|gb|ADX02265.1| thrS [Acinetobacter baumannii 1656-2]
 gi|323516680|gb|ADX91061.1| threonyl-tRNA synthetase [Acinetobacter baumannii TCDC-AB0715]
 gi|332726950|gb|EGJ58455.1| threonine--tRNA ligase [Acinetobacter baumannii 6013150]
 gi|332734140|gb|EGJ65272.1| threonine--tRNA ligase [Acinetobacter baumannii 6013113]
 gi|332737749|gb|EGJ68641.1| threonine--tRNA ligase [Acinetobacter baumannii 6014059]
          Length = 640

 Score =  678 bits (1749), Expect = 0.0,   Method: Composition-based stats.
 Identities = 303/638 (47%), Positives = 433/638 (67%), Gaps = 15/638 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T P+G  K+F    +  +VA+SI   LAK  VA  +N ++ D  D +  + +++IITP+
Sbjct: 4   ITLPNGDQKSFDHPVSVMEVAQSIGPGLAKNTVAGRVNDRLVDACDLITEDSTLQIITPK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  AV+ ++PE ++ IGP+IE+GFYYD    +PF+ D++A IE++
Sbjct: 64  DEEGLEIIRHSCAHLVGHAVKQLFPEAKMVIGPVIEEGFYYDIWMPRPFTLDDMAAIEER 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+++I +D   +K+    ++  ++F  + E YK+ ++E +P ++ + LY   E+ D+CRG
Sbjct: 124 MKKLIDQDYDVIKKMTPRDEVIKVFTDRGEEYKLRLVEDMPEEKAMGLYYHQEYVDMCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +T  +K F KL K++GAYWRGD+    L RIYGTAW  +++L  Y+  +EE+EKRD
Sbjct: 184 PHVPNTKFLKSF-KLTKISGAYWRGDAKNEQLQRIYGTAWADKKQLAAYIKRIEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHL 304
           HRK+ + +DLFH+ E+  G++FWH  GW I+Q L  YMR+ +  + Y+EI TPQ++D  L
Sbjct: 243 HRKIGKALDLFHMQEEAPGMVFWHANGWTIYQVLEQYMRKVQQDNGYQEIKTPQIVDFTL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGH  +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYR+LP+RLAE
Sbjct: 303 WEKSGHAANYAENMFT------THSESRNYAVKPMNCPCHVQVFNQGLKSYRDLPIRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNEPSGSLHG+MRVRGFTQDDAH+FCTKEQ+  E      L + +YKDFGFE++ 
Sbjct: 357 FGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTKEQIGKEVADFIKLTLDVYKDFGFEEVQ 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +KLSTRPEKRVG DALWD AE  +   LD         +   +  GEGAFYGPK E+ LK
Sbjct: 417 MKLSTRPEKRVGDDALWDLAEKSLADALDAAG------LEWELQPGEGAFYGPKIEFSLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D +GR WQCGTIQ DFNLP R +A YV   +E+  PVM+HRA+ GS ERFIGI+IE++ G
Sbjct: 471 DCLGRVWQCGTIQCDFNLPVRLDASYVTEENERDQPVMLHRAILGSFERFIGILIEHYAG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
            +P WLSP+QA V  IT S  E ++++   LK + L   +D RNE I +KIRE ++++IP
Sbjct: 531 FMPPWLSPVQACVMNITDSQAEASEQVVAKLKENGLRAISDLRNEKIGFKIRERTLERIP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +++ GD+E  E ++ +R         +S+   I ++ 
Sbjct: 591 YLLVLGDREVEEGTVNVRTRSGKNLGTMSVDAFIDLVK 628


>gi|257464982|ref|ZP_05629353.1| threonyl-tRNA synthetase [Actinobacillus minor 202]
 gi|257450642|gb|EEV24685.1| threonyl-tRNA synthetase [Actinobacillus minor 202]
          Length = 643

 Score =  678 bits (1749), Expect = 0.0,   Method: Composition-based stats.
 Identities = 296/648 (45%), Positives = 430/648 (66%), Gaps = 16/648 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS + F    +  +VA+SI   LAK  +A  +NG+  D SD +  + ++EIIT +
Sbjct: 4   ITLPDGSQRQFDNPVSVMEVAQSIGAGLAKATIAGRVNGERRDASDIISEDATLEIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHS AH++  A++ ++P V++AIGP I++GFYYD D ++  + +++  +EK+
Sbjct: 64  DEDGLEIIRHSTAHLLGHAIKQLFPNVKMAIGPTIDNGFYYDIDLDRSLTQEDIDALEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K+ +S ++AR+ FES+ E YK+ IL E+I   ++  LY   E+ D+CR
Sbjct: 124 MLELAKTNYDVVKKRVSWQEARDTFESRGEPYKMAILDENISKDDHPALYHHEEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +      F KL KVAGAYWRGDS   ML RIYGTAW  +++L  YL  LEE+ KR
Sbjct: 184 GPHVPNMRFCHHF-KLQKVAGAYWRGDSKNKMLQRIYGTAWADKKQLADYLQRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ + +DL+H+ E+  G++FWH  GW IF+ L +++R K+K+ DY+E+  P ++D+ 
Sbjct: 243 DHRKIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW +Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWERTGHWQNYADLMFT------TQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++  IY  FGFE I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIESEVTSCIKMVYDIYSTFGFENI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPE R+G DA+WD AE  +   L        + +   +  GEGAFYGPK E+ L
Sbjct: 417 AVKLSTRPENRIGDDAMWDRAEEGLANAL------RNNGLEYEIQEGEGAFYGPKIEFAL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D + R+WQCGT+Q+DF LP R +A YV   + +  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 RDCLDREWQCGTVQLDFALPGRLDASYVAEDNGRRTPVMIHRAILGSIERFIGIITEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+QA+V  IT S  EY Q++   L    L ++ D RNE + +K+REH+++++
Sbjct: 531 GFFPAWLAPVQAVVMNITDSQAEYVQKVVKQLSDAGLRVKADLRNEKVGFKVREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           P +++CGDKE +E  + +R           + + + IL  +    + +
Sbjct: 591 PYMLVCGDKEIAEGKVSVRTRKGADLGTYKVEEFVEILKSQVRGRELK 638


>gi|90579635|ref|ZP_01235444.1| threonyl-tRNA synthetase [Vibrio angustum S14]
 gi|90439209|gb|EAS64391.1| threonyl-tRNA synthetase [Vibrio angustum S14]
          Length = 643

 Score =  678 bits (1749), Expect = 0.0,   Method: Composition-based stats.
 Identities = 302/648 (46%), Positives = 431/648 (66%), Gaps = 20/648 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS + F    +  DVA SI   LAK  +A  ++G   D  D +  + S+
Sbjct: 1   MPV---ITLPDGSQRQFDAPVSTMDVALSIGPGLAKATIAGRVDGVRVDACDLIENDASL 57

Query: 60  EIITPEDP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           EIIT +D    L ++RHSCAH++  A++ ++P+ ++AIGP I++GFYYD D EQ  + ++
Sbjct: 58  EIITAKDEVDGLEIVRHSCAHLLGHAIKQLYPDAKMAIGPTIDNGFYYDIDLEQSLTQED 117

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQG 177
           L  IEK+M E+       +K+ +S ++AR+ F+++ E YK+EIL E++   +   LY   
Sbjct: 118 LEVIEKRMVELAKTKYQVVKKKVSWQEARDAFDARGETYKIEILDENVARDDRPGLYHHE 177

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           E+ D+CRGPHV   G  + F KL+ VAGAYWRG+S+  ML RIYGTA++ ++ L  +L  
Sbjct: 178 EYIDMCRGPHVPHMGFCQNF-KLLSVAGAYWRGNSDNKMLQRIYGTAFHDKKALKAHLTR 236

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
           LEE+ KRDHRK+ +++DLFH+ ++  G++FWH  GW IF+ L  ++R K+ + DY+E+  
Sbjct: 237 LEEAAKRDHRKIGKQLDLFHMQQEAPGMVFWHHNGWTIFRELEVFIREKLNEYDYQEVKG 296

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P ++D+ LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR
Sbjct: 297 PLMMDRVLWERSGHWDKYADAMFT------TSSENREYAIKPMNCPGHVQIFNQGLKSYR 350

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +LP+R+AEFGS +RNEPSGSLHG+MRVRGFTQDDAH+FCT+ Q+  E      ++   YK
Sbjct: 351 DLPLRMAEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTEAQVQQEVTSCIEMVYDTYK 410

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
            FGF+ I+VKLSTRPEKRVGSDA+WD AE+ +   L++++      I   +  GEGAFYG
Sbjct: 411 TFGFDNIVVKLSTRPEKRVGSDAMWDKAESDLITALESME------IPFEIQEGEGAFYG 464

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK E+ L D + R WQCGT+Q+DF LP R  A YV   +E+  PVMIHRA+ GS+ERFIG
Sbjct: 465 PKIEFTLHDCLDRAWQCGTVQLDFALPERLGATYVGEDNERHTPVMIHRAILGSLERFIG 524

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           I+IE++ G  P WL+P QA+V  IT +  EY QEI   LK   + +  D RNE I +KIR
Sbjct: 525 ILIEDYAGFFPTWLAPQQAVVMNITDAQSEYVQEIVEKLKKCGIRVNADLRNEKIGFKIR 584

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           EH++K++P +++CGDKE     + +R        K  + + +  + +E
Sbjct: 585 EHTLKRVPFMLVCGDKEVEAGVVAVRTRKGKDLGKFKIDELVAFMQEE 632


>gi|188025947|ref|ZP_02960307.2| hypothetical protein PROSTU_02247 [Providencia stuartii ATCC 25827]
 gi|188021023|gb|EDU59063.1| hypothetical protein PROSTU_02247 [Providencia stuartii ATCC 25827]
          Length = 653

 Score =  678 bits (1749), Expect = 0.0,   Method: Composition-based stats.
 Identities = 296/647 (45%), Positives = 426/647 (65%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS + F    +  DVA  I   LAK  +A  +NG++ D  + +  + ++
Sbjct: 12  MPV---ITLPDGSQRQFDHAVSVMDVARDIGAGLAKACIAGRVNGELVDACELIEHDANL 68

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L +IRHSCAH++  A++ +WP  ++AIGP+I++GFYYD D +   + ++L
Sbjct: 69  AIITSKDDEGLEIIRHSCAHLLGHAIKQLWPNTKMAIGPVIDNGFYYDIDLDYALTQEDL 128

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE-SIPAKENVTLYRQGE 178
            ++EK+M E+   D   +K+ +S  +ARE F ++ E YKVEIL+ +I   +   LY   E
Sbjct: 129 EKLEKRMLELAKTDYDVIKKRVSWAEARETFVARGEDYKVEILDQNISQDDRPGLYHHQE 188

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KL KVAGAYWRG+S+  ML RIYGTAW  +++L  YL  L
Sbjct: 189 YIDMCRGPHVPNMRFCHHF-KLQKVAGAYWRGNSDNKMLQRIYGTAWADKKQLNAYLLRL 247

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G+ FWH  GW IF+ L +++R K+K  +Y+E+  P
Sbjct: 248 EEAAKRDHRKIGKQLDLYHMQEEAPGMAFWHNDGWTIFRELETFVRTKLKAYNYQEVKGP 307

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW+++GHW++Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 308 FMMDRVLWERTGHWENYKDAMFT------TSSENREYCVKPMNCPGHVQIFNQGLKSYRD 361

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT++Q+ +E      +I  +Y  
Sbjct: 362 LPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEDQILSEVTDCIKMIYDVYAT 421

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI+VKLSTRPEKR+G+D +WD AE  +   L          I      GEGAFYGP
Sbjct: 422 FGFEKIVVKLSTRPEKRIGTDDMWDTAEADLAQALKD------QGIEFEYQPGEGAFYGP 475

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF LP R NA YV  ++E+  PVMIHRAV GS+ERFIGI
Sbjct: 476 KIEFTLYDCLDRAWQCGTVQLDFFLPGRLNASYVGENNERIVPVMIHRAVLGSLERFIGI 535

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E + G  P WL+P Q +V  IT +  +Y QE+ + L+S  +  + D RNE I +KIRE
Sbjct: 536 LTEEYAGFFPTWLAPQQVVVMNITDTQADYVQELVSKLQSVGIRAKADLRNEKIGFKIRE 595

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H+++++P +++CGDKE     + +R         + + +    L +E
Sbjct: 596 HTLRRVPYMLVCGDKEVESGKVSVRTRRGKDLGSLDVNEFTNKLLEE 642


>gi|70729481|ref|YP_259219.1| threonyl-tRNA synthetase [Pseudomonas fluorescens Pf-5]
 gi|68343780|gb|AAY91386.1| threonyl-tRNA synthetase [Pseudomonas fluorescens Pf-5]
          Length = 640

 Score =  678 bits (1749), Expect = 0.0,   Method: Composition-based stats.
 Identities = 296/645 (45%), Positives = 429/645 (66%), Gaps = 18/645 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS ++F    + ++VA SI   LAK  +A  +NGK+ D  D +  + ++
Sbjct: 1   MP---TITLPDGSQRSFDHAVSVAEVAASIGAGLAKATLAGKVNGKLVDACDVIDGDATL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           +IITP+D   L +IRHSCAH++  AV+ ++P  ++ IGP+I++GFYYD   E+PF+ +++
Sbjct: 58  QIITPKDEEGLEIIRHSCAHLVGHAVKQLYPTAKMVIGPVIDEGFYYDIAYERPFTPEDM 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A IE++MQ++I +D   +K+     +  E+F+++ E YK+ ++E +P ++ + LY   E+
Sbjct: 118 AAIEQRMQQLIEKDYDVIKKVTPRAEVIEVFKARGEDYKLRLVEDMPNEQAMGLYYHEEY 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            D+CRGPHV +T  +K F KL K++GAYWRGD+    L RIYGTAW  +++L  Y+  +E
Sbjct: 178 VDMCRGPHVPNTRFLKSF-KLTKLSGAYWRGDAKNEQLQRIYGTAWADKKQLAAYIQRIE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+EKRDHRK+ + + LFH  E+  G++FWH  GW ++Q L  YMR+ +  + Y EI TPQ
Sbjct: 237 EAEKRDHRKIGKRLGLFHTQEEAPGMVFWHPNGWTLYQVLEQYMRKVQRDNGYLEIKTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHW +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYREL
Sbjct: 297 VVDRSLWEKSGHWANYAENMFT------TESESRDYAIKPMNCPCHVQVFNQGLKSYREL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFG+ +RNEPSG+LHG+MRVRGFTQDDAH+FCT++QM  E      L + +Y DF
Sbjct: 351 PMRLAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEDQMQAESAAFIKLTMDVYADF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+ I +KLSTRPEKRVGSD LWD AE+                +   +  GEGAFYGPK
Sbjct: 411 GFKDIEMKLSTRPEKRVGSDDLWDRAESA------LAAALDSAGLPYDLQPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD +GR WQCGT+Q+DFNLP R  A YV+  + + HPVM+HRA+ GS ERF+GI+
Sbjct: 465 IEFSLKDCLGRVWQCGTLQLDFNLPIRLGAEYVSEDNSRKHPVMLHRAILGSFERFVGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+++G  P WL+P QA+V  IT    ++A E+   L       ++D RNE I +KIREH
Sbjct: 525 IEHYEGAFPAWLAPTQAVVMNITDKQADFALEVEKTLNQSGFRAKSDLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           ++ K+P +++ GD+E   +++ +R         + +      L +
Sbjct: 585 TLLKVPYLLVIGDREVEMQTVAVRTREGEDLGSMPVAQFSAFLAQ 629


>gi|297579610|ref|ZP_06941537.1| threonyl-tRNA synthetase [Vibrio cholerae RC385]
 gi|297535256|gb|EFH74090.1| threonyl-tRNA synthetase [Vibrio cholerae RC385]
          Length = 642

 Score =  678 bits (1748), Expect = 0.0,   Method: Composition-based stats.
 Identities = 299/642 (46%), Positives = 425/642 (66%), Gaps = 17/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS ++F    +  +VA+SI   LAK  +A  +NG   D  D +  + S+EIIT +
Sbjct: 4   ITLPDGSQRHFDNPVSTLEVAQSIGPGLAKATIAGRVNGVRVDACDMIEHDASLEIITTK 63

Query: 66  DP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  A++ ++P  ++AIGP I+ GFYYD D EQ  S ++L +IE 
Sbjct: 64  DEVDGLEIVRHSCAHLLGHALKQLYPNAKMAIGPTIDSGFYYDIDLEQSLSQEDLEKIEA 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLC 183
           +M E+       +K+ +S ++AR+ FES+ E+YK+EIL E++   +   LY   E+ D+C
Sbjct: 124 RMVELAKTKYAVVKKKVSWQEARDTFESRGESYKMEILDENVARDDRPGLYHHEEYIDMC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV   G  + F KL+ +AGAYWRG+S+  ML RIYGTA++ ++ L  +L  LEE+ K
Sbjct: 184 RGPHVPHMGFCQNF-KLLNIAGAYWRGNSDNKMLQRIYGTAFHDKKALQAHLTRLEEAAK 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRK+ +++DLFH+ ++  G++FWH  GW IF+ L  ++R+K+ +  Y+E+  P ++D+
Sbjct: 243 RDHRKIGKQLDLFHMQQEAPGMVFWHHNGWSIFRDLEIFIRQKLNEYGYQEVKGPLMMDR 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y   MF       T  + R +A+KPMNCPGH+ +FN GLKSYR+LP+R+
Sbjct: 303 VLWERSGHWDKYADAMFT------TSSENREYAIKPMNCPGHIQIFNQGLKSYRDLPLRM 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSGSLHG+MRVRGFTQDDAH+FCT++Q+  E      ++   Y  FGF+ 
Sbjct: 357 AEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTEDQIQQEVTSCIKMVYDTYTTFGFQN 416

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+VKLSTRPEKRVGSD +WD +E  +   L  +       I   +  GEGAFYGPK E+ 
Sbjct: 417 IVVKLSTRPEKRVGSDEIWDKSEQALIDSLKAM------DIPFEIQEGEGAFYGPKIEFT 470

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D + R WQCGT+Q+DFNLP+R  A YV   +E+  PVMIHRA+ GS+ERFIGI+IE +
Sbjct: 471 LYDCLDRAWQCGTVQLDFNLPTRLGATYVGESNERLIPVMIHRAILGSLERFIGILIEEY 530

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P QAIV  IT    +YA E+A  L+   +  + D RNE I +KIREH++K+
Sbjct: 531 AGFFPTWLAPEQAIVVNITDKQADYAHEVAQKLQKCGIRAKADLRNEKIGFKIREHTLKR 590

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P +++CGD+E     I +R        K  L D I  +  E
Sbjct: 591 VPYMLVCGDQEMEAGEIAVRTRKGKDLGKFKLDDFIAHIQAE 632


>gi|308186646|ref|YP_003930777.1| Threonyl-tRNA synthetase [Pantoea vagans C9-1]
 gi|308057156|gb|ADO09328.1| Threonyl-tRNA synthetase [Pantoea vagans C9-1]
          Length = 642

 Score =  678 bits (1748), Expect = 0.0,   Method: Composition-based stats.
 Identities = 288/647 (44%), Positives = 431/647 (66%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
           MP    +T PDGS + F    +  D+A  I   LAK  +A  +NG++ D +DP+ + + +
Sbjct: 1   MPV---ITLPDGSQRVFDRPVSVMDIALDIGPGLAKACIAGRVNGELVDAADPITDDAAV 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L +IRHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D ++  + +++
Sbjct: 58  AIITAKDEAGLEIIRHSCAHLLGHAIKQLWPDTKMAIGPVIDNGFYYDVDIDRTLTQEDI 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M ++   +   +K+ +S ++AR++F ++ E YK  IL E+I   +   LY   E
Sbjct: 118 DLLEKRMHQLAETNYDVVKKKVSWQEARDVFAARGEIYKTTILDENISHDDKPGLYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KL K++GAYWRGDS+  ML RIYGTAW  +++L  YL  L
Sbjct: 178 YVDMCRGPHVPNMRFCHHF-KLQKISGAYWRGDSSNKMLQRIYGTAWADKKQLAAYLQRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF+ L  ++R K+K+  Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW+++GHW++Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 297 FMMDRVLWEKTGHWENYKEAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSG+LHGLMRVRGFTQDDAHVFCT+EQ+ +E      ++  +Y  
Sbjct: 351 LPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHVFCTEEQVRDEVNSCIRMVYDMYST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI+VKLSTRPEKR+G+D +WD AE  +   L+      ++ I      GEGAFYGP
Sbjct: 411 FGFEKIVVKLSTRPEKRIGTDEMWDRAEEDLAAALN------ENNIEFEFQPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF+LP R  A YV  ++++  PVMIHRA+ GS+ERFIGI
Sbjct: 465 KIEFTLYDCLDRAWQCGTVQLDFSLPKRLEATYVGENNDRQTPVMIHRAILGSMERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E F G  P WL+P+Q +V  IT    EY + +   L++  + ++ D RNE I +KIRE
Sbjct: 525 LTEEFAGFFPTWLAPLQVVVMNITDGQAEYVESLTRKLQNAGIRVKADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H+++++P +++CGDKE     + +R         + +   +  L +E
Sbjct: 585 HTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSMDVDLFVEKLQQE 631


>gi|332284530|ref|YP_004416441.1| threonyl-tRNA synthetase [Pusillimonas sp. T7-7]
 gi|330428483|gb|AEC19817.1| threonyl-tRNA synthetase [Pusillimonas sp. T7-7]
          Length = 648

 Score =  678 bits (1748), Expect = 0.0,   Method: Composition-based stats.
 Identities = 322/648 (49%), Positives = 436/648 (67%), Gaps = 20/648 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAI---NG--KVCDLSDPVR-EG 57
            +++T PDGS + F      SDVA SI   L + A+A  I   +G  K+ D S  +  + 
Sbjct: 1   MVQITLPDGSQREFSGPVAVSDVAHSIGTGLGRAALAGRITTEDGQTKLVDTSFVIEQDT 60

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSD 117
            + IIT +D   L +IRHS AH++A AV+S++P+ QV IGP+I++GFYYDF  ++PF+ +
Sbjct: 61  KLAIITAKDADGLDLIRHSTAHLLAYAVKSLFPDAQVTIGPVIDNGFYYDFSYKRPFTPE 120

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +L  IEKKM E+  +D    ++    + A E F+   E YK EI+ SIP+ E ++LYR+G
Sbjct: 121 DLEAIEKKMAELAKKDEVVTREEWLRDDAVEYFKGIGEHYKAEIIASIPSNEAISLYREG 180

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           ++ DLCRGPHV STG++K F KLMKVAGAYWRGDSN  ML RIYGTAW +++E + YL  
Sbjct: 181 DFIDLCRGPHVPSTGKLKVF-KLMKVAGAYWRGDSNNEMLQRIYGTAWASKEEQSAYLTM 239

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINT 296
           LEE+E+RDHRK+ RE+DLFH  ++  G+IFWH KGW ++Q +  YMR   + + Y+E+  
Sbjct: 240 LEEAERRDHRKIGRELDLFHFQDEAPGLIFWHPKGWTLWQQVEQYMRSVYRDNGYQEVKA 299

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           PQ+LD  LW+++GHWD+Y  NMF       T  + R + LKPMNCPGHV +FN GL SYR
Sbjct: 300 PQILDLSLWKKTGHWDNYAENMFT------TESENRVYGLKPMNCPGHVQIFNAGLHSYR 353

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ELP+R  EFG  +RNEPSGSLHG+MRVRGFTQDD H+FCT++Q+ +EC     L+  +Y 
Sbjct: 354 ELPIRYGEFGQCHRNEPSGSLHGMMRVRGFTQDDGHIFCTEDQLQDECADFTALLQKVYA 413

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           DFGF +I+ K++TRPEKR+GSD +WD AE  +   L      S+      V  GEGAFYG
Sbjct: 414 DFGFTEILYKVATRPEKRIGSDEVWDKAEQALMESL------SRTGCEYEVSPGEGAFYG 467

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK EY LKDAIGR WQCGTIQVDF++P R  A YV++  ++  PVM+HRA+ GS ERFIG
Sbjct: 468 PKIEYTLKDAIGRHWQCGTIQVDFSMPQRLGAEYVDATDQRRTPVMLHRAILGSFERFIG 527

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           ++IEN  G +P+WL+P  A+V  I+ S+ +YA E+A  LK       +D R E I  KIR
Sbjct: 528 MLIENHAGAMPVWLAPEHAVVCCISESSADYAAEVALGLKKQGFRAFSDLRGEKITRKIR 587

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           EHS++KIP I++ G+KE     + +R  G      +SL D    L +E
Sbjct: 588 EHSMQKIPYILVVGEKERESGQVAVRGRGGVDLGVMSLNDFTVRLQQE 635


>gi|261493242|ref|ZP_05989769.1| threonine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
 gi|261496515|ref|ZP_05992895.1| threonine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261307718|gb|EEY09041.1| threonine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261311092|gb|EEY12268.1| threonine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
          Length = 643

 Score =  678 bits (1748), Expect = 0.0,   Method: Composition-based stats.
 Identities = 295/648 (45%), Positives = 429/648 (66%), Gaps = 16/648 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS ++F    +  +VA+SI   LAK  +A  +NG+  D SD + ++ ++EIIT +
Sbjct: 4   ITLPDGSQRSFDNPVSVMEVAQSIGAGLAKATIAGRVNGERRDASDIISQDSALEIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHS AH++  A++ ++P+V++AIGP IE+GFYYD D ++  + ++L  +EK+
Sbjct: 64  DEDGLEIIRHSTAHLLGHAIKQLFPDVKMAIGPTIENGFYYDIDLDRSLTQEDLDALEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K+ +S ++AR+ FE + E YK+ IL E+I       LY   E+ D+CR
Sbjct: 124 MLELAKTNYDVVKRPVSWQEARDTFEKRGEPYKMAILDENIERTATPALYHHEEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +      F KL KVAGAYWRGDS   ML RIYGTAW  +++L +YL  LEE+ KR
Sbjct: 184 GPHVPNMRFCHHF-KLQKVAGAYWRGDSKNKMLQRIYGTAWADKKQLAEYLQRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHR++ + +DL+H+ E+  G++FWH  GW IF+ L +++R K+K+ DY+E+  P ++D+ 
Sbjct: 243 DHRRIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW +Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWQNYADLMFT------TQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++  IY  FGF  I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIESEVTSCIKMVYDIYSTFGFTNI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPE R+G DA+WD AE  +   L        + +   +  GEGAFYGPK E+ L
Sbjct: 417 AVKLSTRPENRIGDDAMWDRAEEGLANAL------RNNGLEYEIQEGEGAFYGPKIEFAL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D +GR+WQCGT+Q+DF LP R  A YV   + +  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 RDCLGREWQCGTVQLDFALPGRLEASYVAEDNGRRTPVMIHRAILGSIERFIGIITEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P QA+V  IT S  +Y Q++   L    + ++ D RNE + +K+REH+++++
Sbjct: 531 GFFPTWLAPTQAVVMNITDSQADYVQQVVKQLSDAGIRVKADLRNEKVGFKVREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           P +++CGDKE +E  + +R           + D + IL  +    + +
Sbjct: 591 PYMLVCGDKEIAEGKVSVRTRKGADLGTYLVSDLVEILKNQIKARELK 638


>gi|168179213|ref|ZP_02613877.1| threonyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
 gi|182670074|gb|EDT82050.1| threonyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
          Length = 635

 Score =  678 bits (1748), Expect = 0.0,   Method: Composition-based stats.
 Identities = 295/643 (45%), Positives = 419/643 (65%), Gaps = 16/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+T  DG +  F      SD+A  IS +L KKA+A  I+G+  DL   + ++ S+EI+
Sbjct: 1   MIKITLKDGKVMEFEEGIKISDIAMKISPALYKKALAAKIDGETVDLMTELHKDSSLEIL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D      +RH+ AHI+A+AV+ ++PEV++AIGP I+ GFYYDF+ +  F+ + L +I
Sbjct: 61  TFKDEMGKWALRHTGAHILAQAVKRLYPEVKLAIGPAIDTGFYYDFEADFTFTPEMLEKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E ++++II  +    +  L  E+A +L + K E YKVE++E +P  E ++ Y+QG++ DL
Sbjct: 121 EAEIKKIIKENHKLERFELPREEAIKLMKEKNEDYKVELIEDLPEGEVISFYKQGDFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPHV STG+VK   KL+ +AGAYWRGD    ML RIYGTA+  + EL +YL  +EE++
Sbjct: 181 CAGPHVPSTGKVKSV-KLLSLAGAYWRGDEKNKMLQRIYGTAFTKKSELDEYLNMIEEAK 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLD 301
           KRDHRKL +E+DLF I E+G G  F+H KG  +   L S+ R +  K  Y+EI TP +L+
Sbjct: 240 KRDHRKLGKELDLFSIHEEGPGFPFFHPKGMIVRNILESFWREEHTKAGYQEIRTPLILN 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW QSGHWD Y+ NM+     DD       +A+KPMNCPG + V+ + + SYR+LP+R
Sbjct: 300 EALWHQSGHWDHYKENMYFTNIDDD------DYAIKPMNCPGGILVYKNSMHSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           L+E G V+R+E SG+LHGLMRVR FTQDDAH++ TKEQ+  E + I  LI   YK FGFE
Sbjct: 354 LSELGIVHRHELSGALHGLMRVRCFTQDDAHLYMTKEQIKEEVVGIIKLIDKFYKLFGFE 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPE  +GSD  W+ A N ++  LD+I           V  G+GAFYGPK ++
Sbjct: 414 YF-VELSTRPEDSMGSDEDWEIATNGLREALDSIGK------EYRVNEGDGAFYGPKIDF 466

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            LKD IGR WQCGTIQ+DF +P RF+  Y+ +  EK  PVM+HR ++GS+ERFIGI+IE 
Sbjct: 467 HLKDCIGRTWQCGTIQLDFQMPERFDLSYIGADGEKHRPVMVHRTIYGSVERFIGILIEQ 526

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  P WL+P+Q  +  IT S  +Y +++   LK +++ +E D RNE I YKIRE  ++
Sbjct: 527 YAGAFPTWLAPVQVKLMNITDSQYDYLKKVEEALKENNIRVEIDTRNEKIGYKIREAQLQ 586

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K+P ++I GDKE     + +R         +SL + I  +  E
Sbjct: 587 KVPYMLILGDKEVEAGKVAVRSRKDGDLGAISLEEFIEKIKNE 629


>gi|303253033|ref|ZP_07339186.1| threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|307247204|ref|ZP_07529254.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. S1536]
 gi|302648123|gb|EFL78326.1| threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|306856262|gb|EFM88415.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. S1536]
          Length = 643

 Score =  678 bits (1748), Expect = 0.0,   Method: Composition-based stats.
 Identities = 292/641 (45%), Positives = 425/641 (66%), Gaps = 16/641 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS + F    +  +VA+SI   LAK  +A  +NG+  D  D +  + S+EIIT +
Sbjct: 4   ITLPDGSQRQFDNPVSVMEVAQSIGAGLAKATIAGRVNGERRDACDIISEDSSLEIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ ++P+V++AIGP I++GFYYD D ++  + ++L  IEK+
Sbjct: 64  DEDGLEIIRHSCAHLLGHAIKQLFPDVKMAIGPTIDNGFYYDVDLDRSLTQEDLDAIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K+ +S ++AR+ FE + E YK+ IL E+I       LY   E+ D+CR
Sbjct: 124 MLELAKTNYDVVKKSVSWQEARDTFEKRGEPYKMAILDENIERTATPALYHHEEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +      F KL KVAGAYWRGDS   ML RIYGTAW  +++L +YL  LEE+ KR
Sbjct: 184 GPHVPNMRFCHHF-KLQKVAGAYWRGDSKNKMLQRIYGTAWADKKQLAEYLTRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHR++ + +DL+H+ E+  G++FWH  GW IF+ L +++R K+K+ DY+E+  P ++D+ 
Sbjct: 243 DHRRIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW +Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWERTGHWQNYADLMFT------TQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+ +E      ++  IY  FGF  I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQIESEVTSCIRMVYDIYSTFGFSNI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPE R+G DA+WD  E+ +   L        + ++  +  GEGAFYGPK E+ L
Sbjct: 417 QVKLSTRPENRIGDDAMWDRTEDGLAKALTA------NGLSYEIQEGEGAFYGPKIEFAL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D + R+WQCGTIQ+DF LP R +A YV   + +  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 RDCLDREWQCGTIQLDFALPGRLDASYVAEDNGRRTPVMIHRAILGSIERFIGIITEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P QA+V  IT S  +Y Q++   L    +  ++D RNE + +K+REH+++++
Sbjct: 531 GFFPTWLAPTQAVVMNITDSQADYVQKVTKALSDAGIRAKSDLRNEKVGFKVREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P +++CGDKE     + +R          ++ + + IL  +
Sbjct: 591 PYMLVCGDKEIEAGKVSVRTRKGADLGTFTIDEFVEILKNQ 631


>gi|310767522|gb|ADP12472.1| threonyl-tRNA synthetase [Erwinia sp. Ejp617]
          Length = 642

 Score =  678 bits (1748), Expect = 0.0,   Method: Composition-based stats.
 Identities = 294/647 (45%), Positives = 430/647 (66%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS ++F    +  D+A  I   LAK  +A  +NG++ D  DP+  + S+
Sbjct: 1   MPV---ITLPDGSQRSFDHAVSVMDIALDIGPGLAKACIAGRVNGELVDAVDPIAADASV 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L +IRHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D ++  + +++
Sbjct: 58  AIITAKDEAGLEIIRHSCAHLLGHAIKQLWPDTKMAIGPVIDNGFYYDVDLDRTLTQEDI 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
            Q+EK+M ++   +   +K+ +S ++AR+ F ++ E YK+ IL E+I   +   LY   E
Sbjct: 118 EQLEKRMHQLAETNYDVIKKNVSWQEARDAFAARGENYKMTILDENISHDDRPGLYHHQE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KL K++GAYWRGDS+  ML RIYGTAW  +++L  YL  +
Sbjct: 178 YVDMCRGPHVPNMRFCHHF-KLQKISGAYWRGDSSNKMLQRIYGTAWADKKQLAAYLLRI 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF+ L  ++R K+K+  Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRTKLKEYQYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW+++GHWD+Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 297 FMMDRVLWEKTGHWDNYKEAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++   Y  
Sbjct: 351 LPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQVRDEVNSCIKMVYDTYST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI+VKLSTRPEKR+GSD LWD +E  +   L       ++ I      GEGAFYGP
Sbjct: 411 FGFEKIVVKLSTRPEKRIGSDDLWDRSEADLAAALK------ENDIPFEYQPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF+LP R NA YV   +E+  PVMIHRA+ GS+ERFIGI
Sbjct: 465 KIEFTLHDCLDRAWQCGTVQLDFSLPGRLNASYVGESNERQVPVMIHRAILGSMERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E + G  P WL+P+Q +V  IT    EY  E+   L++  +  + D RNE I +KIRE
Sbjct: 525 LTEEYAGFFPTWLAPVQVVVMNITDGQSEYVAELTRKLQNAGIRAKADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H+++++P +++CGDKE     + +R         + + +AI  L  E
Sbjct: 585 HTLRRVPYMLVCGDKEVEAGKVAVRTRRGKDLGSIDVNEAIAKLQDE 631


>gi|147671507|ref|YP_001215778.1| threonyl-tRNA synthetase [Vibrio cholerae O395]
 gi|262168212|ref|ZP_06035910.1| threonyl-tRNA synthetase [Vibrio cholerae RC27]
 gi|172047342|sp|A5EZ18|SYT_VIBC3 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|146313890|gb|ABQ18430.1| threonyl-tRNA synthetase [Vibrio cholerae O395]
 gi|227014955|gb|ACP11164.1| threonyl-tRNA synthetase [Vibrio cholerae O395]
 gi|262023455|gb|EEY42158.1| threonyl-tRNA synthetase [Vibrio cholerae RC27]
          Length = 642

 Score =  678 bits (1748), Expect = 0.0,   Method: Composition-based stats.
 Identities = 297/642 (46%), Positives = 424/642 (66%), Gaps = 17/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS ++F    +  +VA+SI   LAK  +A  +NG   D  D +  + S+EIIT +
Sbjct: 4   ITLPDGSQRHFDNPVSTLEVAQSIGPGLAKATIAGRVNGARVDACDLIEHDASLEIITTK 63

Query: 66  DP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  A++ ++P  ++AIGP I+ GFYYD D EQ  S ++L +IE 
Sbjct: 64  DEVDGLEIVRHSCAHLLGHALKQLYPNAKMAIGPTIDSGFYYDIDLEQSLSQEDLEKIEA 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLC 183
           +M E+       +K+ +S ++AR+ FES+ E+YK+EIL E++   +   LY   E+ D+C
Sbjct: 124 RMVELAKTKYAVVKKKVSWQEARDTFESRGESYKMEILDENVARDDRPGLYHHEEYIDMC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV   G  + F KL+ +AGAYWRG+S+  ML RIYGTA++ ++ L  +L  LEE+ K
Sbjct: 184 RGPHVPHMGFCQNF-KLLNIAGAYWRGNSDNKMLQRIYGTAFHDKKALQAHLTRLEEAAK 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRK+ +++DLFH+ ++  G++FWH  GW +F+ L  ++R K+ +  Y+E+  P ++D+
Sbjct: 243 RDHRKIGKQLDLFHMQQEAPGMVFWHHNGWSVFRELEIFIRHKLNEYGYQEVKGPLMMDR 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y   MF       T  + R +A+KPMNCPGH+ +FN GLKSYR+LP+R+
Sbjct: 303 VLWERSGHWDKYADAMFT------TSSENREYAIKPMNCPGHIQIFNQGLKSYRDLPLRM 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSGSLHG+MRVRGFTQDDAH+FCT++Q+  E      ++   Y  FGF+ 
Sbjct: 357 AEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTEDQIQQEVTSCIKMVYDTYTTFGFQN 416

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+VKLSTRPEKRVGSD +WD +E  +   L  +       I   +  GEGAFYGPK E+ 
Sbjct: 417 IVVKLSTRPEKRVGSDEIWDKSEQALIDSLKAM------DIPFEIQEGEGAFYGPKIEFT 470

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D + R WQCGT+Q+DFNLP+R  A YV   +E+  PVMIHRA+ GS+ERFIGI+IE +
Sbjct: 471 LYDCLDRAWQCGTVQLDFNLPTRLGATYVGESNERLIPVMIHRAILGSLERFIGILIEEY 530

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P QA+V  IT    +YA E+A  L+   +  + D RNE I +KIREH++K+
Sbjct: 531 AGFFPTWLAPEQAVVVNITDKQADYAHEVAQKLQKCGIRAKADLRNEKIGFKIREHTLKR 590

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P +++CGD+E     I +R        K  L D I  +  E
Sbjct: 591 VPYMLVCGDQEMEAGEIAVRTRKGKDLGKFKLDDFIAHIQAE 632


>gi|268316191|ref|YP_003289910.1| threonyl-tRNA synthetase [Rhodothermus marinus DSM 4252]
 gi|262333725|gb|ACY47522.1| threonyl-tRNA synthetase [Rhodothermus marinus DSM 4252]
          Length = 662

 Score =  678 bits (1748), Expect = 0.0,   Method: Composition-based stats.
 Identities = 274/648 (42%), Positives = 416/648 (64%), Gaps = 18/648 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           I++TFPDGS + FP   TG ++AE IS  LA++A+A+ +NG+V DL+ P+ E + + I+T
Sbjct: 11  IRITFPDGSERTFPKGITGRELAEQISPRLAREALAIEVNGEVWDLTRPIEEDARVRILT 70

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQI 122
            EDP   AV  HS AH+MAEA+++++P V+  IGP IE GFYYD D   +  S+++LA+I
Sbjct: 71  WEDPEGKAVYWHSTAHLMAEALEALYPGVKFGIGPPIEQGFYYDVDLGGRKLSAEDLARI 130

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E+KM+E+  RD P+ +  +S ++A E F+ K + YKVE++E +     +T YRQG + DL
Sbjct: 131 EEKMRELARRDVPYERIPVSKQEALEYFKKKGDPYKVELIEEL-EDGTITFYRQGNFTDL 189

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG +K   KL+ VAGAYWRGD  RP L+RIYG ++  ++EL  YL+ LEE+ 
Sbjct: 190 CRGPHVPSTGYIK-HVKLLNVAGAYWRGDERRPQLTRIYGISFPKKKELDDYLHRLEEAR 248

Query: 243 KRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVL 300
           KRDHR+L RE++LF    + G G+  W  +G  + +TLI+++R + I+  Y+ + TP + 
Sbjct: 249 KRDHRRLGRELELFTFSQKVGPGLPLWLPRGATLRETLINFLREEQIRRGYQPVVTPHIA 308

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
              L++ SGH+  Y+ + F     +    +   + LKPMNCP H+ ++    +SYRELP+
Sbjct: 309 RLELYKTSGHYPYYKDSQFPPMIENPETGEG--YLLKPMNCPHHIMIYADRPRSYRELPL 366

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLAEFG VYR E +G L GL RVRGFT DDAH+FC  +Q+ +E   + +L + +++  GF
Sbjct: 367 RLAEFGQVYRYEQTGELSGLTRVRGFTIDDAHIFCRPDQVKDEFKNVIDLTLYVFRSLGF 426

Query: 421 EKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           ++   ++S R        VG D LW+ AE  ++     +   + + +      GE AFYG
Sbjct: 427 DEFEAQISLRDPNNREKYVGDDELWEQAEQAIREAAAEMGLQATEEL------GEAAFYG 480

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK +++++DA+GR WQ GT+Q+D+ LP RF+ +Y+ + ++K  PVMIHRA FGS+ERFIG
Sbjct: 481 PKLDFMVRDALGRRWQLGTVQLDYILPERFDLYYIGADNQKHRPVMIHRAPFGSLERFIG 540

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           ++IE+  GN PLWL+P+Q  V  ++    +YA+ +   L      +E D R ETI YKIR
Sbjct: 541 VLIEHCAGNFPLWLAPVQVAVLPLSDELNDYAEAVGRRLLEAGFRVEVDTRTETIGYKIR 600

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  ++KIP ++I G +E    ++ +R+ G       +L + I  L  E
Sbjct: 601 QAEVQKIPYMLIVGRREREAGTVAVRKHGEGDQGPATLDEFIERLRTE 648


>gi|190575251|ref|YP_001973096.1| threonyl-tRNA synthetase [Stenotrophomonas maltophilia K279a]
 gi|229558456|sp|B2FN79|SYT_STRMK RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|190013173|emb|CAQ46806.1| putative threonyl-tRNA synthetase [Stenotrophomonas maltophilia
           K279a]
          Length = 633

 Score =  678 bits (1748), Expect = 0.0,   Method: Composition-based stats.
 Identities = 289/644 (44%), Positives = 426/644 (66%), Gaps = 16/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +T PDGS + F    +  +VA+SI   LAK  +A A++G + D SD +  + S+ II
Sbjct: 1   MINITLPDGSRREFENPVSVMEVAQSIGAGLAKATIAGAVDGVLVDASDVIDHDASLRII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   + +IRHSCAH++  AV+ ++P+V++ IGP+I +GFYYD   E+PF+ D++A I
Sbjct: 61  TAKDEEGVEIIRHSCAHLVGHAVKQLYPDVKMVIGPVIAEGFYYDIYSERPFTPDDMAAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-ENVTLYRQGEWFD 181
           EK+M E+IA+D   +K+     +  E+F+++ E YK+ ++E +    + + +Y   E+ D
Sbjct: 121 EKRMGELIAQDYDVIKKMTPRAEVIEIFKARGEDYKLRLIEDMSEDIQAMGMYYHQEYVD 180

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           +CRGPHV +T  +K F KL +++GAYWRGD+    L RIYGTAW  +++L  Y+  +EE+
Sbjct: 181 MCRGPHVPNTRFLKAF-KLTRISGAYWRGDAQNEQLQRIYGTAWADKKQLEAYIKRIEEA 239

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
           E RDHR++ ++ DLFH+ E+  G++FWH KGW ++Q +  YMR+  ++  Y E+  PQ+L
Sbjct: 240 EMRDHRRIGKQQDLFHLQEEAPGLVFWHPKGWALWQVVEQYMRKVYRNSGYGEVRCPQIL 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D  LW++SGHWD+Y+ NMF       T  + RT+A+KPMNCPGH+ VFN GL SYR+LP+
Sbjct: 300 DVSLWKKSGHWDNYQDNMFF------TESEKRTYAVKPMNCPGHIQVFNQGLHSYRDLPI 353

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R  EFGS +RNEPSG+LHG++RVRGFTQDD HVFCT+ Q+ +E    H   +++Y+ FGF
Sbjct: 354 RYGEFGSCHRNEPSGALHGILRVRGFTQDDGHVFCTENQIESEVTAFHQQALAVYQHFGF 413

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           ++I +K++ RPE R+G DA WD AE  ++  L          +    L GEGAFYGPK E
Sbjct: 414 DEIQIKIALRPESRLGDDATWDKAEGALRSALTACG------VEWQELPGEGAFYGPKIE 467

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           Y LKDAIGR WQ GT+QVDF +P R  A YV+ +S+K HPVM+HRA+ GS+ERF+GI+IE
Sbjct: 468 YHLKDAIGRTWQLGTMQVDFMMPGRLGAEYVDENSQKKHPVMLHRAIVGSMERFLGILIE 527

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +  G  P WL+P Q +V  IT +  +Y   +   L      + +D RNE I YKIREH++
Sbjct: 528 HHAGQFPAWLAPTQVVVANITDAQADYVSGVTKTLAEQGFRVSSDLRNEKIGYKIREHTL 587

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +++P +++ GD+E    ++ +R         +SL   I  L  E
Sbjct: 588 QRVPYLLVIGDREKENGAVAVRTRSGEDLGSMSLQAFIERLHAE 631


>gi|114767278|ref|ZP_01446118.1| threonyl-tRNA synthetase [Pelagibaca bermudensis HTCC2601]
 gi|114540584|gb|EAU43657.1| threonyl-tRNA synthetase [Roseovarius sp. HTCC2601]
          Length = 649

 Score =  678 bits (1748), Expect = 0.0,   Method: Composition-based stats.
 Identities = 324/653 (49%), Positives = 431/653 (66%), Gaps = 10/653 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           + I LTFPDG+ + +    T + VAESIS+SL+KKA++  ++G+  DL  P+  +  I I
Sbjct: 2   AQISLTFPDGNKREYEQGVTPAAVAESISKSLSKKAISAMVDGQHWDLQWPIEQDAQIAI 61

Query: 62  ITPEDPR-SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            T +D   +L +IRH  AH+MA AVQ IWP+ +V IGP+ E G++YDFD+ +PF+ ++L 
Sbjct: 62  NTLQDEAPALELIRHDLAHVMARAVQEIWPDTKVTIGPVTEHGWFYDFDRAEPFTPEDLG 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           QIE KM++II    P   +    ++AR  +E   E YKVE+++ IP    + +Y  G W 
Sbjct: 122 QIEAKMKDIINAREPVTTEIWERDRARAFYEENGEPYKVELVDRIPEGAPIRMYWHGGWQ 181

Query: 181 DLCRGPHVRSTGQ-VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           DLCRGPH++ TGQ     FKLM V+GAYW GD NRPML R+ G A+  +++L  YL FLE
Sbjct: 182 DLCRGPHLQHTGQLPADSFKLMGVSGAYWFGDVNRPMLQRVQGVAFRNRKDLQGYLNFLE 241

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+ KRDHRKL REMDLFH+  +  G IFWH  GW I+ +L  YMRR+     Y E+NTPQ
Sbjct: 242 EAAKRDHRKLGREMDLFHLQPEAPGQIFWHPNGWTIYTSLQDYMRRQQHRDGYVEVNTPQ 301

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW+ SGHWD+Y+ NMF V+  ++  ++    ALKPMNCP HV +FN GLKSYR+L
Sbjct: 302 VVDRKLWEASGHWDNYQENMFIVEVDEEHAREKSINALKPMNCPCHVQIFNSGLKSYRDL 361

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFGS  R EPSG+LHG+MRVRGFTQDDAH+FCT +Q+  E  K    +  IY D 
Sbjct: 362 PLRMAEFGSCNRYEPSGALHGIMRVRGFTQDDAHIFCTDDQIEAETKKFIEFLAGIYADL 421

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF    +KLSTRPEKR+GS+  WD  E  +                  +  GEGAFYGPK
Sbjct: 422 GFHNWTIKLSTRPEKRIGSEESWDRVEAALGDACKAAGYG------FELQEGEGAFYGPK 475

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ L DAIGR+WQCGT+QVD NLP R +A Y+    EK  PVM+HRAV GS ERFIGI+
Sbjct: 476 LEFTLTDAIGREWQCGTLQVDPNLPDRLDASYIGQDGEKHRPVMLHRAVLGSFERFIGIL 535

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE   G LP WL+P Q +V +ITS A +Y  E+   LK+  +  E D RNE INYK+REH
Sbjct: 536 IEEHAGKLPFWLAPRQVVVASITSEADDYVHEVVAELKAAGVRAEADIRNEKINYKVREH 595

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           S+ K+P+I+  G +E  ER++ +RR G   T+  +L +    L  E+ PPD +
Sbjct: 596 SVGKVPVILAVGHREVEERTVTVRRLGEKQTKVAALAEITQELGVEATPPDLR 648


>gi|157962084|ref|YP_001502118.1| threonyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
 gi|189083623|sp|A8H4U6|SYT_SHEPA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|157847084|gb|ABV87583.1| threonyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
          Length = 642

 Score =  677 bits (1747), Expect = 0.0,   Method: Composition-based stats.
 Identities = 289/647 (44%), Positives = 418/647 (64%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS + F    +  DVA  I   LAK  +A  +NG++ D  D +  +  +
Sbjct: 1   MPV---ITLPDGSKREFAHSVSTLDVAADIGPGLAKACIAGRVNGELKDACDLIETDSDL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   + ++RHSCAH++  A++ ++PE ++AIGP+I++GFYYD D +   + +++
Sbjct: 58  SIITAKDEEGVEILRHSCAHLLGHAIKQLFPETKMAIGPVIDNGFYYDIDLDHKLTQEDI 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M E+   +    K+ +S ++AR+ FES+ E YK+ IL E+IP      LY   E
Sbjct: 118 DALEKRMAELAKTNYAVDKRVVSWQEARDTFESRGEVYKMAILDENIPKDSTPALYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +    + F KLM VAGAYWRG+S+  ML R+YGTAW  ++ L  +L  L
Sbjct: 178 YIDMCRGPHVPNMKFCQNF-KLMSVAGAYWRGNSDNKMLQRVYGTAWADKKALKVHLNRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW +F  L  ++R+K+ +  Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWSLFLELEKFIRQKLGQYTYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+
Sbjct: 297 LMMDRVLWERSGHWDKYSEAMFT------TSSENREYAVKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFG  +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+  E      ++   Y+ 
Sbjct: 351 LPLRMAEFGCCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQVQQEVSACIKMVYDTYET 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF  I+VKLSTRPEKR+G D +WD AE  +K  L        + I   +L GEGAFYGP
Sbjct: 411 FGFNSIVVKLSTRPEKRIGDDEMWDRAEEALKQALKA------NDIEFEILPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+D+ LP R  A YV   + +  PVMIHRA+ GS+ERF+GI
Sbjct: 465 KIEFTLHDCLDRAWQCGTVQLDYALPGRLGATYVAEDNSRQTPVMIHRAILGSLERFLGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE + G  P WLSP+Q +V  IT    +Y  E+ NL K H +    D RNE I +KIRE
Sbjct: 525 LIEEYAGKFPAWLSPVQVVVMNITDKQSDYVDEVVNLFKEHGIRATKDLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H+++++P +++ GD+E   + + +R        K+ + +    L  +
Sbjct: 585 HTLRRVPYLLVVGDQEMENKEVAVRTREGVDLGKMQIEEFATKLKNQ 631


>gi|292488129|ref|YP_003531006.1| threonyl-tRNA synthetase [Erwinia amylovora CFBP1430]
 gi|292899340|ref|YP_003538709.1| threonyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
 gi|291199188|emb|CBJ46302.1| threonyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
 gi|291553553|emb|CBA20598.1| Threonyl-tRNA synthetase [Erwinia amylovora CFBP1430]
 gi|312172261|emb|CBX80518.1| Threonyl-tRNA synthetase [Erwinia amylovora ATCC BAA-2158]
          Length = 642

 Score =  677 bits (1747), Expect = 0.0,   Method: Composition-based stats.
 Identities = 292/647 (45%), Positives = 430/647 (66%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS ++F    +  D+A  I   LAK  +A  +NG++ D  DP+  + S+
Sbjct: 1   MPV---ITLPDGSQRSFDHAVSVMDIALDIGPGLAKACIAGRVNGELVDAVDPITADASV 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L +IRHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D ++  + +++
Sbjct: 58  AIITAKDEVGLEIIRHSCAHLLGHAIKQLWPDTKMAIGPVIDNGFYYDVDLDRTLTQEDI 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M ++   +   +K+ +S ++A + F ++ E YK+ IL E+I   +   LY   E
Sbjct: 118 ELLEKRMHQLAETNYDVIKKTVSWQEAHDAFAARGENYKMTILDENISHDDRPGLYHHQE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KL K++GAYWRGDSN  ML RIYGTAW  +++L  YL  L
Sbjct: 178 YVDMCRGPHVPNMRFCHHF-KLQKISGAYWRGDSNNKMLQRIYGTAWADKKQLAAYLLRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF+ L  ++R K+K+ +Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRTKLKEYEYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW+++GHW++Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 297 FMMDRVLWEKTGHWENYKEAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  
Sbjct: 351 LPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQVRDEVNSCIKMVYDMYST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI+VKLSTRPEKR+GSD LWD +E  +   L       ++ I      GEGAFYGP
Sbjct: 411 FGFEKIVVKLSTRPEKRIGSDELWDRSETDLAAALK------ENGIPFEYQPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF+LP R +A YV   +E+  PVMIHRA+ GS+ERFIGI
Sbjct: 465 KIEFTLHDCLDRAWQCGTVQLDFSLPGRLSASYVGESNERQVPVMIHRAILGSMERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E + G  P WL+P+Q +V  IT    EY  E+   L++  +  + D RNE I +KIRE
Sbjct: 525 LTEEYAGFFPTWLAPLQVVVMNITDGQSEYVAELTRKLQNAGIRAKADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H+++++P +++CGDKE     + +R         + + +AI  L  E
Sbjct: 585 HTLRRVPYMLVCGDKEVEAGKVAVRTRRGKDLGSIDVNEAIAKLQDE 631


>gi|296117435|ref|ZP_06836023.1| threonyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769]
 gi|295976037|gb|EFG82827.1| threonyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769]
          Length = 642

 Score =  677 bits (1747), Expect = 0.0,   Method: Composition-based stats.
 Identities = 320/654 (48%), Positives = 455/654 (69%), Gaps = 15/654 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP+   +T PDGS++ F    TG+ VA+SI   LA+ A+A+ ++G + D+   +  +  +
Sbjct: 1   MPA---ITLPDGSVRRFDGAVTGTTVAQSIGAGLARAALAMEVDGHLMDIGREIDHDAHV 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
             +T +D  SL +IRH  AH++AEAVQS+WP  QV IGP IE+GFYYDF + +PF+ ++ 
Sbjct: 58  RFVTRKDAESLEMIRHDAAHVLAEAVQSLWPGTQVTIGPSIENGFYYDFYRNEPFTPEDF 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IE +M+EI+  ++PF ++    E+A   FE + E +K E++  +P  E +++YRQGEW
Sbjct: 118 PRIEARMREIVDANAPFTRETWPREEAIRFFEERGERFKAELIRDLPEDEEISIYRQGEW 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPH+R TG + K F+LMKVAGAYWRGD   PML+RIYGTAW  Q+EL  +++ LE
Sbjct: 178 LDLCRGPHLRGTGDIGKAFRLMKVAGAYWRGDHRNPMLTRIYGTAWRDQKELDAHIHQLE 237

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+E+RDHR++ REM LFHI E+  G IFWH KGW+++  L  YMRR + ++ Y+E+ TPQ
Sbjct: 238 EAERRDHRRIGREMGLFHIQEEAVGQIFWHPKGWRLYSVLQDYMRRAQTRNGYQEVRTPQ 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D+ LW+ SGHWD YR +MF     D+     +T ALKPMNCP HV +F HGL+SYREL
Sbjct: 298 LVDRGLWEASGHWDKYRQHMFIATVEDED----KTLALKPMNCPCHVQIFRHGLRSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG+ +R EPSG+LHG+MRVRGFTQDDAH+FCT+EQ+ +E  +   ++ ++Y+D 
Sbjct: 354 PLRMAEFGACHRYEPSGALHGIMRVRGFTQDDAHIFCTEEQIADETARFVRMLSAVYQDL 413

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE   VK + RPE+R GSD  WD +EN +K             +      GEGAFYGPK
Sbjct: 414 GFEHFRVKFADRPEQRAGSDDTWDRSENALKEA------CHMAGVEYEHNPGEGAFYGPK 467

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E++L+DAIGRDWQCGT+QVD+ +P R +A YV   S +  PVM+HRA+ GS ERF+GI+
Sbjct: 468 LEFVLRDAIGRDWQCGTLQVDYVMPERLDATYVGEDSARHRPVMLHRAILGSFERFLGIL 527

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE   G  P+WL+P+Q +V +I + A  YA+E+   L++  + +E D RNE IN KIREH
Sbjct: 528 IEQHAGRFPMWLAPVQVVVASIVTDAEPYAREVVEKLQAAGVVVEADVRNEKINAKIREH 587

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           S+ ++P+I++ G KEA ER++ +RR G    + V L +A+  L  E+ PPD ++
Sbjct: 588 SLARVPVILVVGRKEAEERTVALRRLGGKAQEIVPLDEAVTALAHEATPPDLRR 641


>gi|259908578|ref|YP_002648934.1| threonyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
 gi|224964200|emb|CAX55707.1| Threonyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
 gi|283478547|emb|CAY74463.1| thrS [Erwinia pyrifoliae DSM 12163]
          Length = 642

 Score =  677 bits (1747), Expect = 0.0,   Method: Composition-based stats.
 Identities = 294/647 (45%), Positives = 430/647 (66%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP    +T PDGS ++F    +  D+A  I   LAK  +A  +NG++ D  DP+  + S+
Sbjct: 1   MPV---ITLPDGSQRSFDHAVSVMDIALDIGPGLAKACIAGRVNGELVDAVDPIASDASV 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L +IRHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D ++  + +++
Sbjct: 58  AIITAKDEAGLEIIRHSCAHLLGHAIKQLWPDTKMAIGPVIDNGFYYDVDIDRTLTQEDI 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
            Q+EK+M ++   +   +K+ +S ++AR+ F ++ E YK+ IL E+I   +   LY   E
Sbjct: 118 EQLEKRMHQLAETNYDVIKKNVSWQEARDAFAARGENYKMTILDENISHDDRPGLYHHQE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KL K++GAYWRGDS+  ML RIYGTAW  +++L  YL  +
Sbjct: 178 YVDMCRGPHVPNMRFCHHF-KLQKISGAYWRGDSSNKMLQRIYGTAWADKKQLAAYLLRI 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF+ L  ++R K+K+  Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRTKLKEYQYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW+++GHWD+Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 297 FMMDRVLWEKTGHWDNYKEAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++   Y  
Sbjct: 351 LPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQVRDEVNSCIKMVYDTYST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI+VKLSTRPEKR+GSD LWD +E  +   L       ++ I      GEGAFYGP
Sbjct: 411 FGFEKIVVKLSTRPEKRIGSDDLWDRSEADLAAALK------ENDIPFEYQPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF+LP R NA YV   +E+  PVMIHRA+ GS+ERFIGI
Sbjct: 465 KIEFTLHDCLDRAWQCGTVQLDFSLPGRLNASYVGESNERQVPVMIHRAILGSMERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E + G  P WL+P+Q +V  IT    EY  E+   L++  +  + D RNE I +KIRE
Sbjct: 525 LTEEYAGFFPTWLAPVQVVVMNITDGQSEYVAELTRKLQNAGIRAKADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H+++++P +++CGDKE     + +R         + + +AI  L  E
Sbjct: 585 HTLRRVPYMLVCGDKEVEAGKVAVRTRRGKDLGSIDVNEAIAKLQDE 631


>gi|255262353|ref|ZP_05341695.1| threonyl-tRNA synthetase [Thalassiobium sp. R2A62]
 gi|255104688|gb|EET47362.1| threonyl-tRNA synthetase [Thalassiobium sp. R2A62]
          Length = 649

 Score =  677 bits (1747), Expect = 0.0,   Method: Composition-based stats.
 Identities = 326/654 (49%), Positives = 438/654 (66%), Gaps = 10/654 (1%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           M + I LTFPD S++ +    T +DVA  IS SL KKA++  ++G   D+  P+  + +I
Sbjct: 1   MMAQISLTFPDNSVRQYDAGVTPADVAADISNSLRKKAISAHVDGAHWDMQWPITTDANI 60

Query: 60  EIITPEDPR-SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
            I T +D   +  ++RH  AHIMA AVQ IWP+VQV IGP+I+DG+YYDFD+ +PF+ ++
Sbjct: 61  AINTMKDEGPANELVRHDLAHIMARAVQEIWPDVQVTIGPVIKDGWYYDFDRAEPFTPED 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L  IEKKM+EII        +     +A + +E   E YKVE++++IP  E + +Y  G+
Sbjct: 121 LGLIEKKMKEIINLRDEVRTEVWDRARAVKHYEDAGEPYKVELIDAIPGDEPLRMYWHGD 180

Query: 179 WFDLCRGPHVRSTGQ-VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           W DLCRGPH+++TGQ     FKLM VAGAYWRGDS+R ML RIYG A+  ++ L ++L+ 
Sbjct: 181 WQDLCRGPHLQNTGQVPADAFKLMSVAGAYWRGDSDRAMLQRIYGVAFTNKEGLKKHLHM 240

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINT 296
           LEE+ KRDHRKL REMDLFH+ E+  G +FWH  GW ++  L  YMRRK +   Y E+NT
Sbjct: 241 LEEAAKRDHRKLGREMDLFHMQEEAPGQVFWHPNGWTVYTELQDYMRRKQRAGGYVEVNT 300

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           PQV+D+ LW+ SGHW+ Y+ NMF V+  ++  ++    ALKPMNCP HV +FN GLKSYR
Sbjct: 301 PQVVDRKLWEASGHWEKYQENMFIVEVDEEHAREKAVNALKPMNCPCHVQIFNQGLKSYR 360

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +LP+R+AEFGS  R EPSG+LHG+MRVRGFTQDD H+FC ++Q+  E       + +IYK
Sbjct: 361 DLPLRMAEFGSCNRYEPSGALHGIMRVRGFTQDDGHIFCREDQVQEETAVYIEFLSTIYK 420

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           D GFEK  VK S RP+ R GSD +WD AE  +      +  +    I   +  GEGAFYG
Sbjct: 421 DLGFEKFRVKYSDRPDTRAGSDEVWDKAEQAL------LTATRNAGIEPEMNPGEGAFYG 474

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK E++L DAIGRDWQCGT QVDF LP R +A Y+ +   K  PVM+HRA  GS ERFIG
Sbjct: 475 PKLEFVLTDAIGRDWQCGTHQVDFVLPERLDATYIGTDGGKHRPVMLHRATLGSFERFIG 534

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           I+IE   G LP WL+P Q +VTTI S A ++A EI   L+S  +  E D RNE INYK+R
Sbjct: 535 ILIEEHAGKLPFWLAPRQVVVTTIVSDADDFAAEIVETLRSKGVRAEADTRNEKINYKVR 594

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDC 650
           EHS+ K+P+I+  G +E  ER++ +RR G   ++ ++  +  P L  E+ PPD 
Sbjct: 595 EHSLAKVPVILAIGQREVDERTVSVRRLGEKQSKVIAFDEVAPQLAIEATPPDL 648


>gi|307131177|ref|YP_003883193.1| threonyl-tRNA synthetase [Dickeya dadantii 3937]
 gi|306528706|gb|ADM98636.1| threonyl-tRNA synthetase [Dickeya dadantii 3937]
          Length = 642

 Score =  677 bits (1747), Expect = 0.0,   Method: Composition-based stats.
 Identities = 293/647 (45%), Positives = 436/647 (67%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D +D +  +  +
Sbjct: 1   MPV---ITLPDGSQRHYDHAVSPLDVALDIGPGLAKACIAGRVNGELVDATDLIESDAQL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   + ++RHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D ++  + ++L
Sbjct: 58  SIITAKDEDGVEILRHSCAHLLGHAIKQLWPDTKMAIGPVIDNGFYYDVDLDRTLTQEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M E+ ++D   +K+ +S ++AR+ F ++ E+YKV IL E+I   +   LY   E
Sbjct: 118 DLLEKRMHELASKDYDVIKKKVSWQEARDTFAARGESYKVAILDENISHDDRPGLYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KL K +GAYWRGDS   ML RIYGTAW  +++L+ YL  L
Sbjct: 178 YIDMCRGPHVPNMRFCHHF-KLQKTSGAYWRGDSKNKMLQRIYGTAWADKKQLSAYLQRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF+ L +++R K+K+  Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEAFVRMKLKEYQYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW+++GHW++Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 297 FMMDRVLWEKTGHWENYKEAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  
Sbjct: 351 LPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQVRDEVNSCIKMVYDMYST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI+VKLSTRPEKR+GSD +WD AE  +   L      +++ I      GEGAFYGP
Sbjct: 411 FGFEKIVVKLSTRPEKRIGSDDMWDRAEEDLAAAL------TENGIPFDYQPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF+LP R +A YV  ++E+  PVMIHRA+ GS+ERFIGI
Sbjct: 465 KIEFTLHDCLDRAWQCGTVQLDFSLPGRLSASYVGENNERQVPVMIHRAILGSMERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E F G  P WL+P+QA+V  IT +  +Y  E+   L+   + ++ D RNE I +KIRE
Sbjct: 525 LTEEFAGFFPTWLAPVQAVVMNITDTQSDYVSELTRKLQDAGIRVKADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H+++++P +++CGDKE     + +R         + + + I  L +E
Sbjct: 585 HTLRRVPYMLVCGDKEVEAGKVAVRTRRGKDLGSLDVSEVITKLQEE 631


>gi|260556061|ref|ZP_05828280.1| threonyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606]
 gi|260410116|gb|EEX03415.1| threonyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606]
          Length = 640

 Score =  677 bits (1747), Expect = 0.0,   Method: Composition-based stats.
 Identities = 303/638 (47%), Positives = 432/638 (67%), Gaps = 15/638 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T P+G  K+F    +  +VA+SI   LAK  VA  +N ++ D  D +  + +++IITP+
Sbjct: 4   ITLPNGDQKSFDHPVSVMEVAQSIGPGLAKNTVAGRVNDRLVDACDLITEDSTLQIITPK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  AV+ ++PE ++ IGP+IE+GFYYD    +PF+ D++A IE++
Sbjct: 64  DEEGLEIIRHSCAHLVGHAVKQLFPEAKMVIGPVIEEGFYYDIWMPRPFTLDDMAAIEER 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+++I +D   +K+    ++   +F  + E YK+ ++E +P ++ + LY   E+ D+CRG
Sbjct: 124 MKKLIDQDYDVIKKMTPRDEVIRVFTDRGEEYKLRLVEDMPEEKAMGLYYHQEYVDMCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +T  +K F KL K++GAYWRGD+    L RIYGTAW  +++L  Y+  +EE+EKRD
Sbjct: 184 PHVPNTKFLKSF-KLTKISGAYWRGDAKNEQLQRIYGTAWADKKQLAAYIKRIEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHL 304
           HRK+ + +DLFH+ E+  G++FWH  GW I+Q L  YMR+ +  + Y+EI TPQ++D  L
Sbjct: 243 HRKIGKALDLFHMQEEAPGMVFWHANGWTIYQVLEQYMRKVQQDNGYQEIKTPQIVDFTL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGH  +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYR+LP+RLAE
Sbjct: 303 WEKSGHAANYAENMFT------THSESRNYAVKPMNCPCHVQVFNQGLKSYRDLPIRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNEPSGSLHG+MRVRGFTQDDAH+FCTKEQ+  E      L + +YKDFGFE++ 
Sbjct: 357 FGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTKEQIGKEVADFIKLTLDVYKDFGFEEVQ 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +KLSTRPEKRVG DALWD AE  +   LD         +   +  GEGAFYGPK E+ LK
Sbjct: 417 MKLSTRPEKRVGDDALWDLAEKSLADALDAAG------LEWELQPGEGAFYGPKIEFSLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D +GR WQCGTIQ DFNLP R +A YV   +E+  PVM+HRA+ GS ERFIGI+IE++ G
Sbjct: 471 DCLGRVWQCGTIQCDFNLPVRLDASYVTEENERDQPVMLHRAILGSFERFIGILIEHYAG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
            +P WLSP+QA V  IT S  E ++++   LK + L   +D RNE I +KIRE ++++IP
Sbjct: 531 FMPPWLSPVQACVMNITDSQAEASEQVVAKLKENGLRAISDLRNEKIGFKIRERTLERIP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +++ GD+E  E ++ +R         +S+   I ++ 
Sbjct: 591 YLLVLGDREVEEGTVNVRTRSGKNLGTMSVDAFIDLVK 628


>gi|295687966|ref|YP_003591659.1| threonyl-tRNA synthetase [Caulobacter segnis ATCC 21756]
 gi|295429869|gb|ADG09041.1| threonyl-tRNA synthetase [Caulobacter segnis ATCC 21756]
          Length = 658

 Score =  677 bits (1747), Expect = 0.0,   Method: Composition-based stats.
 Identities = 327/653 (50%), Positives = 441/653 (67%), Gaps = 18/653 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR------EG 57
            I L FPDGS + +P  ATG DVA +IS+SL KKA+ + ++G++ DL  P+       E 
Sbjct: 1   MIDLVFPDGSSRQYPDGATGRDVAAAISKSLEKKALLIKLDGQLLDLDRPLTPDLLAGER 60

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSD 117
             EI+T E P +L  IRH  AH++AEAVQ ++P  QV IGP +EDGFYYDF +++PFS D
Sbjct: 61  KFEILTREAPEALDTIRHDTAHVLAEAVQELFPGTQVTIGPNVEDGFYYDFARDEPFSLD 120

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +L +IEK+M+EI+ RD    ++    E+A + F+   E YK +I+  +P  + +T+YRQG
Sbjct: 121 DLEKIEKRMKEIVDRDEKISREVWDREEAIKHFDDIGEQYKAQIIRDLPPTDTITVYRQG 180

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
            W DLCRGPH+ ST  V K FKL K+AGAYWRGD N   L RIYGTAW ++ +L  YL  
Sbjct: 181 NWKDLCRGPHLPSTKHVGKAFKLTKLAGAYWRGDQNNAQLQRIYGTAWASEADLDAYLKR 240

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
           +EE+EKRDHRKL + MDLFHI E+G G++FWH KGW +++ L  YMRR++    Y+E+ T
Sbjct: 241 IEEAEKRDHRKLGKTMDLFHIQEEGKGMVFWHPKGWALYRVLEDYMRRRLDAAGYKEVKT 300

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           PQ+LD+ LW++SGH + +   MF  + A     +    A+KPMNCPGH+ +FN G KSYR
Sbjct: 301 PQILDKSLWEKSGHAEKFGHAMFMCESA-----EGEVLAVKPMNCPGHIQIFNVGQKSYR 355

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ELP+R+AEFG+ +R EPSG++HG+MRVR FTQDDAH+FC +EQ+  E  +   L+ S+Y 
Sbjct: 356 ELPLRMAEFGACHRYEPSGAMHGIMRVRAFTQDDAHIFCREEQVTEESARFIELLRSVYN 415

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           D G      K STRP+ R G+D +WD AE+ +    +    +        +  GEGAFYG
Sbjct: 416 DLGMTLADTKFSTRPDLRAGTDEVWDKAESALSAAAEAAGET------LVLQPGEGAFYG 469

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK E+ LKDAIGR WQCGT+Q+DF LP R +A YV+    K  PVM+HRA+ GS ERFIG
Sbjct: 470 PKLEFSLKDAIGRVWQCGTLQLDFVLPERLDAEYVSEDGSKKRPVMLHRAILGSFERFIG 529

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           I++ENF G LP+WL+P Q +V TITS A +YA+E+   L    +  E D RNE INYKIR
Sbjct: 530 ILLENFAGALPVWLAPTQVVVATITSDADDYAREVVETLTKLGMRAELDLRNEKINYKIR 589

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPD 649
           EHS+ K+P+I + G KEA  R + +RR G      +SL +AI +LT ++ PPD
Sbjct: 590 EHSLAKVPVIAVVGRKEAETRQLALRRLGGEGQSILSLEEAISVLTSDATPPD 642


>gi|332306910|ref|YP_004434761.1| threonyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332174239|gb|AEE23493.1| threonyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 638

 Score =  677 bits (1747), Expect = 0.0,   Method: Composition-based stats.
 Identities = 304/641 (47%), Positives = 428/641 (66%), Gaps = 16/641 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  DVA  I   LAK  +A  ++G   D  D +  +  ++IIT +
Sbjct: 4   ITLPDGSQRQFDNAVSVFDVANDIGPGLAKATIAGKVDGVRVDACDLIEKDAQLQIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ +WP+V++AIGP I++GFYYD D E   + ++L ++EK+
Sbjct: 64  DEDGLEIIRHSCAHLIGHAIKQLWPDVKMAIGPTIDNGFYYDIDMEHSINDEDLVKLEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K+ +S ++AR+ FE++ E YK++IL E+IP      LY   E+ D+CR
Sbjct: 124 MLELAKTNYNVVKKVVSWQEARDTFEARGEEYKLQILDENIPKDATPGLYHHEEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +    + F KLMKVAGAYWRGDS+  ML RIYGTAW  +++L  YL  LEE+EKR
Sbjct: 184 GPHVPNMRFCQHF-KLMKVAGAYWRGDSDNKMLQRIYGTAWADKKQLKAYLNRLEEAEKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ + +DLFH  E+  G++FWH  GW I+  L  ++R K+++ +Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKALDLFHWQEEAPGMVFWHNDGWSIYTELEKFVRSKLREYEYQEVKAPLMMDRS 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SGHWD Y  NMF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKSGHWDKYAENMFT------TTSEKREYAVKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFG  +RNEPSG+LHGLMRVRGFTQDDAH+FCT++Q+  E     + +  IYK FGFE I
Sbjct: 357 EFGCCHRNEPSGALHGLMRVRGFTQDDAHIFCTEDQILAEVGGCIDSVYEIYKIFGFENI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPEKRVGSD +WD AE  +   L +        I+   L GEGAFYGPK E+ L
Sbjct: 417 SVKLSTRPEKRVGSDEVWDKAEKELAEALTS------KGIDFQYLPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF++P R  + YV    E+  PVMIHRA+ GS+ERFIGI+IE + 
Sbjct: 471 HDCLDRAWQCGTVQLDFSMPGRLGSTYVAEDGERKVPVMIHRAILGSLERFIGILIEEYS 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  PLWL+P QA+V  IT +  EYAQ++   LK   +  ++D RNE I +KIREH+++++
Sbjct: 531 GFFPLWLAPTQAVVMNITDNQSEYAQKVVKKLKEIGIRAKSDLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P +++ GDKE     I +R        K+S+   I +  ++
Sbjct: 591 PYLLVVGDKEIEAGEIAVRSRKGDDLGKMSVDAFIELACEQ 631


>gi|58582810|ref|YP_201826.1| threonyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|58427404|gb|AAW76441.1| threonyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC10331]
          Length = 671

 Score =  677 bits (1747), Expect = 0.0,   Method: Composition-based stats.
 Identities = 287/644 (44%), Positives = 420/644 (65%), Gaps = 16/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +T PDGS + F    +   VA+SI   LAK  +A  ++G++ D SD +  + S+ II
Sbjct: 38  MINITLPDGSRREFESPVSVMQVAQSIGAGLAKATIAGRVDGQLVDASDVIDHDASLRII 97

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   + +IRHSCAH++  AV+ ++PEV++ IGP+I +GFYYD   E+PF+ +++A I
Sbjct: 98  TAKDAEGVEIIRHSCAHLVGHAVKQLYPEVKMVIGPVIAEGFYYDIYSERPFTPEDMAAI 157

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-ENVTLYRQGEWFD 181
           E++MQ +IA+D   +K+     +  E+F  + E YK+ +++ +      + LY   E+ D
Sbjct: 158 EQRMQALIAQDYDVIKKVTPRAEVIEVFAQRGEEYKLRLIDDMSDDITAMGLYYHQEYVD 217

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           +CRGPHV +T  +K F KL +++GAYWRGD+    L RIYGTAW  +++L  Y+  +EE+
Sbjct: 218 MCRGPHVPNTRFLKAF-KLTRISGAYWRGDAKNEQLQRIYGTAWADKKQLDAYILRMEEA 276

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
           +KRDHR++ +  DLFH+ E+  G++FWH KGW ++Q +  YMR+  +D  Y E+  PQ+L
Sbjct: 277 DKRDHRRIGKAQDLFHLQEEAPGLVFWHPKGWSLWQVVEQYMRKVYRDSGYGEVRCPQIL 336

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D  LWQ+SGHWD+Y+  MF       T  + RT+A+KPMNCPGHV VFN GL SYR+LP+
Sbjct: 337 DVSLWQKSGHWDNYQDAMFF------TESEKRTYAVKPMNCPGHVQVFNQGLHSYRDLPI 390

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R  EFG+ +RNEPSG+LHG++RVRGFTQDD HVFC + Q+ +E    H   +++Y  FGF
Sbjct: 391 RYGEFGACHRNEPSGALHGILRVRGFTQDDGHVFCLESQIESEVTAFHQQALAVYTAFGF 450

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           + I +K++ RPEKR+G DA WD AE  ++  L          +    L GEGAFYGPK E
Sbjct: 451 DDIQIKIALRPEKRLGDDATWDKAEAALRSAL------GVCGVEWQELPGEGAFYGPKIE 504

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           Y LKDAIGR WQ GT+QVDF +P R  A YV+ +S+K HPVM+HRA+ GS+ERFIGI+IE
Sbjct: 505 YHLKDAIGRTWQLGTMQVDFMMPGRLGAEYVDENSQKKHPVMLHRAIVGSMERFIGILIE 564

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +  G  P WL+P+Q +V  IT +  +Y   +   L +    +  D RNE I YKIREH++
Sbjct: 565 HHAGAFPSWLAPVQVVVANITDAQADYVDAVRKTLANQGFRVSADLRNEKIGYKIREHTL 624

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +++P +++ GD+E    ++ +R         +++   I  L  E
Sbjct: 625 QRVPYLLVVGDREKENGAVAVRTRSGEDLGTMTVSAFIERLQAE 668


>gi|332993607|gb|AEF03662.1| threonyl-tRNA synthetase [Alteromonas sp. SN2]
          Length = 638

 Score =  677 bits (1746), Expect = 0.0,   Method: Composition-based stats.
 Identities = 298/647 (46%), Positives = 420/647 (64%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS + F    +  DVA  I   LAK  +A  +NG++ D  D +  +  +
Sbjct: 1   MPV---ITLPDGSQRAFDQSVSVLDVANDIGPGLAKATIAGKVNGELVDAVDLIESDAQL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           +IIT +D   L ++RHSCAH++  A++ +WP  ++AIGP I++GFYYD D E+  + +++
Sbjct: 58  QIITAKDEAGLEILRHSCAHLLGHAIKQLWPNTKMAIGPTIDNGFYYDVDMEESLTQEDI 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
            ++EK+M ++   +   +K  +S ++AR+ FE++ E YK+EIL E+I   +   LY   E
Sbjct: 118 QKLEKRMLQLAKTNYNVVKNKVSWQEARDAFEARGETYKMEILDENISHDDRPGLYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +    + F KLMKVAGAYWRGDS+  ML RIYGTAW  +++L  YL  L
Sbjct: 178 YVDMCRGPHVPNMKFCQNF-KLMKVAGAYWRGDSDNKMLQRIYGTAWADKKQLKAYLQRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+EKRDHRK+ + ++LFH  E+  G++FWH  GW I+  L  ++R K++D  Y+E+  P
Sbjct: 237 EEAEKRDHRKIGKALNLFHWQEEAPGMVFWHNDGWSIYTELEKFVREKLRDYTYDEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW++SGHW+ Y  NMF       T  + R +A+KPMNCPGHV +FN GLKSYR+
Sbjct: 297 LMMDRSLWEKSGHWEKYAENMFT------TESEKREYAIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFG  +RNEPSG+LHGLMRVRGFTQDDAH+FCT+EQ+  E      ++   Y  
Sbjct: 351 LPLRMAEFGCCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQILEEVSGCIKMVYETYAA 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF+K+ VKLSTRPEKRVGSD +WD      K      +    + I      GEGAFYGP
Sbjct: 411 FGFDKVAVKLSTRPEKRVGSDEIWD------KSEAALAEALKANDIEFEYQPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF++P R  + YV    E+  PVMIHRA+ GS+ERFIGI
Sbjct: 465 KIEFTLHDCLNRAWQCGTVQLDFSMPGRLGSTYVAEDGERKVPVMIHRAILGSLERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E F G  PLWL+P Q ++  IT S  EYAQE    L+      ++D RNE I +KIRE
Sbjct: 525 LTEEFAGFFPLWLAPQQVVILNITDSQGEYAQECVKKLQKSGFRAKSDLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H++K++P +++ GDKE     + +R        K+SL   I +  +E
Sbjct: 585 HTLKRVPYMLVVGDKEMEAGEVAVRSRSGDDLGKMSLESFIAMANQE 631


>gi|310815279|ref|YP_003963243.1| threonyl-tRNA synthetase [Ketogulonicigenium vulgare Y25]
 gi|308754014|gb|ADO41943.1| threonyl-tRNA synthetase [Ketogulonicigenium vulgare Y25]
          Length = 648

 Score =  677 bits (1746), Expect = 0.0,   Method: Composition-based stats.
 Identities = 324/652 (49%), Positives = 439/652 (67%), Gaps = 10/652 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           S I LTFPDG+ + +P   T + VAESIS+SLAK A++  ++G+  DL  P+  + SI +
Sbjct: 2   SLISLTFPDGNKREYPAGITAAAVAESISKSLAKAAISAQLDGQHWDLQWPITADASIAL 61

Query: 62  ITPEDPR-SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            T +D   +L +IRH  AHIMA AVQ IWP+V+V IGP+ + G++YDFD+ +PF+ ++L 
Sbjct: 62  NTMKDEAPALELIRHDLAHIMARAVQEIWPDVKVTIGPVRDYGWFYDFDRAEPFTPEDLG 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IE +M++II    P   +     +A   +E + E YK+E++  IP  E + +Y  G+W 
Sbjct: 122 AIEAQMKKIINAREPVRTEVWERARALAYYEDRGEPYKIELVNRIPGDEPLRMYWHGDWQ 181

Query: 181 DLCRGPHVRSTGQ-VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           DLCRGPH++STGQ     FKL  VAGAYW GDS+RPML RIYG A+  +++L  ++  LE
Sbjct: 182 DLCRGPHLQSTGQVPADGFKLTHVAGAYWLGDSSRPMLQRIYGVAFRNREDLKAHMTMLE 241

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+ KRDHR+L REMDLFH+ E+  G +FWH  GW ++  L  YMRR + KD Y E+NTPQ
Sbjct: 242 EAAKRDHRRLGREMDLFHMQEEAPGQVFWHPNGWTVYTALQDYMRRRQRKDGYVEVNTPQ 301

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+++ LW++SGHW++YR NMF V+  ++  K+    ALKPMNCP HV +FNHGLKSYREL
Sbjct: 302 VVNRVLWEKSGHWENYRDNMFIVEVDEEGAKEKVVNALKPMNCPCHVQIFNHGLKSYREL 361

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFGS  R EPSG+LHG+MRVRGFTQDD H+FCT++Q+ +E  K    + S+Y D 
Sbjct: 362 PLRMAEFGSCARYEPSGALHGIMRVRGFTQDDGHIFCTEDQIESETKKFIEFLASVYADL 421

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE   VKLSTRPEKR+G++  WD AE  +               +  +  GEGAFYGPK
Sbjct: 422 GFESWRVKLSTRPEKRIGTEESWDHAEQSLGNACRKAGY------DYELQEGEGAFYGPK 475

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E++L DAIGRDWQCGT+QVD NLP R +A Y+     K  P+M+HRA  GS ERF+GI+
Sbjct: 476 LEFVLTDAIGRDWQCGTLQVDPNLPERLDANYIGQDGAKHRPIMLHRACLGSFERFVGIL 535

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IENF G LP WL+P Q +V +I S A +Y  E+   L +  +  E D RNE INYK+REH
Sbjct: 536 IENFAGKLPFWLAPRQVVVASIVSDADDYVHEVVAALSAAGVRAEADTRNEKINYKVREH 595

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDC 650
           S+ K+P+I+  G +E  ER++ +RR G   T  +SL   +      +LPPD 
Sbjct: 596 SLGKVPLILAIGAREVEERTVTVRRLGENQTATMSLDAILAETRASALPPDL 647


>gi|168183457|ref|ZP_02618121.1| threonine--tRNA ligase [Clostridium botulinum Bf]
 gi|237796594|ref|YP_002864146.1| threonyl-tRNA synthetase [Clostridium botulinum Ba4 str. 657]
 gi|259516348|sp|C3KTK0|SYT_CLOB6 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|182673322|gb|EDT85283.1| threonine--tRNA ligase [Clostridium botulinum Bf]
 gi|229263282|gb|ACQ54315.1| threonine--tRNA ligase [Clostridium botulinum Ba4 str. 657]
          Length = 635

 Score =  677 bits (1746), Expect = 0.0,   Method: Composition-based stats.
 Identities = 297/643 (46%), Positives = 419/643 (65%), Gaps = 16/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+T  DG +  F      SD+A  IS +L KKA+A  I+G+  DL   + ++ S+EI+
Sbjct: 1   MIKITLKDGKVMEFEEGIKISDIAMKISPALYKKALAAKIDGETVDLMTELHKDSSLEIL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T ED      +RH+ AHI+A+AV+ ++PEV++AIGP I+ GFYYDF+ +  F+ + L +I
Sbjct: 61  TFEDEMGKWALRHTGAHILAQAVKRLYPEVKLAIGPAIDTGFYYDFEADFTFTPEMLEKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E ++++II  +    +  L  E+A  L + K E YKVE++E +P  E ++ Y+QG++ DL
Sbjct: 121 EAEIKKIIKENHKLERFELPREEAINLMKEKNEDYKVELIEDLPEGEVISFYKQGDFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPHV STG+VK   KL+ +AGAYWRGD N  ML RIYGTA+  + EL +YL  LEE++
Sbjct: 181 CAGPHVPSTGKVKSV-KLLSLAGAYWRGDENNKMLQRIYGTAFTKKSELDEYLNMLEEAK 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLD 301
           KRDHRKL +E+DLF I E+G G  F+H KG  I   L ++ R +  K  Y+EI TP +L+
Sbjct: 240 KRDHRKLGKELDLFSIHEEGPGFPFFHPKGMIIRNILENFWREEHTKAGYQEIRTPLILN 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW QSGHWD Y+ NM+       T  D   +A+KPMNCPG + V+ + + SYR+LP+R
Sbjct: 300 EALWHQSGHWDHYKENMYF------TNIDDGDYAIKPMNCPGGILVYKNSMHSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           L+E G V+R+E SG+LHGLMRVR FTQDDAH++ TKEQ+  E + I  LI   YK FGFE
Sbjct: 354 LSELGIVHRHELSGALHGLMRVRCFTQDDAHLYMTKEQIKEEIVGIIKLIDKFYKLFGFE 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPE  +GSD  W+ A N ++  LD+I           V  G+GAFYGPK ++
Sbjct: 414 YF-VELSTRPEDSMGSDEDWEIATNGLREALDSIGK------EYRVNEGDGAFYGPKIDF 466

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            LKD IGR WQCGTIQ+DF +P RF+  Y+ +  EK  PVM+HR ++GS+ERFIGI+IE 
Sbjct: 467 HLKDCIGRTWQCGTIQLDFQMPERFDLSYIGADGEKHRPVMVHRTIYGSVERFIGILIEQ 526

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  P WL+P+Q  +  IT +  +Y +++   LK +++ +E D RNE I YKIRE  ++
Sbjct: 527 YAGAFPTWLAPVQVKLMNITDAQYDYLKKVEEALKENNIRVEIDTRNEKIGYKIREAQLQ 586

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K+P ++I GDKE     + +R         +SL + I  +  E
Sbjct: 587 KVPYMLILGDKEVEAGKVAVRSRKDGDLGAISLEEFIEKIKNE 629


>gi|307256244|ref|ZP_07538030.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           10 str. D13039]
 gi|306865263|gb|EFM97160.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           10 str. D13039]
          Length = 643

 Score =  677 bits (1746), Expect = 0.0,   Method: Composition-based stats.
 Identities = 292/641 (45%), Positives = 425/641 (66%), Gaps = 16/641 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS + F    +  +VA+SI   LAK  +A  +NG+  D  D +  + S+EIIT +
Sbjct: 4   ITLPDGSQRQFDNPVSVMEVAQSIGAGLAKATIAGRVNGERRDACDIISEDSSLEIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ ++P+V++AIGP I++GFYYD D ++  + ++L  IEK+
Sbjct: 64  DEDGLEIIRHSCAHLLGHAIKQLFPDVKMAIGPTIDNGFYYDVDLDRSLTQEDLDAIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M  +   +   +K+ +S ++AR+ FE + E YK+ IL E+I       LY   E+ D+CR
Sbjct: 124 MLGLAKTNYDVVKKRVSWQEARDTFEKRGEPYKMAILDENIERTATPALYLHEEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +      F KL KVAGAYWRGDS   ML RIYGTAW  +++L +YL  LEE+ KR
Sbjct: 184 GPHVPNMRFCHHF-KLQKVAGAYWRGDSKNKMLQRIYGTAWADKKQLAEYLTRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHR++ + +DL+H+ E+  G++FWH  GW IF+ L +++R K+K+ DY+E+  P ++D+ 
Sbjct: 243 DHRRIGKALDLYHMQEEAPGLVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW +Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWERTGHWQNYADLMFT------TQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+ +E      ++  IY  FGF  I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQIESEVTSCIRMVYDIYSTFGFSNI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPE R+G DA+WD AE+ +   L        + ++  +  GEGAFYGPK E+ L
Sbjct: 417 QVKLSTRPENRIGDDAMWDRAEDGLAKALTA------NGLSYEIQEGEGAFYGPKIEFAL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D + R+WQCGTIQ+DF LP R +A YV   + +  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 RDCLDREWQCGTIQLDFALPGRLDASYVAEDNGRRTPVMIHRAILGSIERFIGIITEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P QA+V  IT S  +Y Q++   L    +  ++D RNE + +K+REH+++++
Sbjct: 531 GFFPTWLAPTQAVVMNITDSQADYVQKVTKALSDAGIRAKSDLRNEKVGFKVREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P +++CGDKE     + +R          ++ + + IL  +
Sbjct: 591 PYMLVCGDKEIEAGKVSVRTRKGADLGTFTIDEFVEILKNQ 631


>gi|50121350|ref|YP_050517.1| threonyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
 gi|73919790|sp|Q6D4G8|SYT_ERWCT RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|49611876|emb|CAG75325.1| threonyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
          Length = 642

 Score =  677 bits (1746), Expect = 0.0,   Method: Composition-based stats.
 Identities = 292/647 (45%), Positives = 429/647 (66%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP    +T PDGS +++    +  DVA  I   LAK  +A  ++G++ D SD +  +  +
Sbjct: 1   MPV---ITLPDGSQRHYDHAVSPLDVALDIGPGLAKACIAGRVDGELIDASDKIDTDAQL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L +IRHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D ++  + +++
Sbjct: 58  AIITAKDDAGLEIIRHSCAHLLGHAIKQLWPDTKMAIGPVIDNGFYYDVDIDRTLTQEDI 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M E+   D   +K+ +S ++AR+ F ++ E YK+ IL E+I   +   LY   E
Sbjct: 118 ELLEKRMHELADTDYDVIKKKVSWQEARDAFAARGETYKIAILDENISHDDRPGLYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KL K +GAYWRGDS   ML RIYGTAW  +++L  YL  L
Sbjct: 178 YIDMCRGPHVPNMRFCHHF-KLQKTSGAYWRGDSKNKMLQRIYGTAWADKKQLASYLQRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF+ L +++R K+K   Y+E+  P
Sbjct: 237 EEASKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEAFVRMKLKSYQYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ +W+++GHWD+Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 297 FMMDRVMWEKTGHWDNYKEAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  
Sbjct: 351 LPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQVRDEVNSCIKMVYDMYST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI+VKLSTRPEKR+GSD +WD AE  +   L      +++ I      GEGAFYGP
Sbjct: 411 FGFEKIVVKLSTRPEKRIGSDEMWDRAEADLAAAL------TENNIEFAYQPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF+LP R +A YV   +E+  PVMIHRA+ GS+ERFIGI
Sbjct: 465 KIEFTLHDCLDRAWQCGTVQLDFSLPGRLSASYVGESNERQVPVMIHRAILGSMERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E F G  P WL+P+Q ++  IT S  +Y  E+   L+   + ++ D RNE I +KIRE
Sbjct: 525 LTEEFAGFFPTWLAPVQVVIINITDSQSDYVNELTQKLQEAGIRVKADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H+++++P +++CGDKE     + +R         + + + I  L +E
Sbjct: 585 HTLRRVPYMLVCGDKEVEAGKVAVRTRRGKDLGSLDVSEVISKLQQE 631


>gi|170759804|ref|YP_001788457.1| threonyl-tRNA synthetase [Clostridium botulinum A3 str. Loch Maree]
 gi|238688792|sp|B1L0T7|SYT_CLOBM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|169406793|gb|ACA55204.1| threonine--tRNA ligase [Clostridium botulinum A3 str. Loch Maree]
          Length = 635

 Score =  677 bits (1746), Expect = 0.0,   Method: Composition-based stats.
 Identities = 299/643 (46%), Positives = 420/643 (65%), Gaps = 16/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+T  DG +  F      SD+A  IS +L KKA+A  I+G+  DL   + ++ S+EI+
Sbjct: 1   MIKITLKDGKVMEFEEGIKISDIAMKISPALYKKALAAKIDGETVDLMTELHKDSSLEIL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T ED      +RH+ AHI+A+AV+ ++PEV++AIGP I+ GFYYDF+ +  F+ + L +I
Sbjct: 61  TFEDEMGKWALRHTGAHILAQAVKRLYPEVKLAIGPAIDTGFYYDFEADFTFTPEMLEKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E ++++II  +    +  L  E+A +L + K E YKVE++E +P  E ++ Y+QG++ DL
Sbjct: 121 EAEIKKIIKENHKLERFELPREEAIDLMKEKNEDYKVELIEDLPEGEVISFYKQGDFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPHV STG+VK   KL+ +AGAYWRGD N  ML RIYGTA+  + EL +YL  LEE++
Sbjct: 181 CAGPHVPSTGKVKSV-KLLSLAGAYWRGDENNKMLQRIYGTAFTKKSELDEYLNMLEEAK 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLD 301
           KRDHRKL +E+DLF I E+G G  F+H KG  I   L S+ R +  K  Y+EI TP +L+
Sbjct: 240 KRDHRKLGKELDLFSIHEEGPGFPFFHPKGMIIRNILESFWREEHTKAGYQEIRTPLILN 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW QSGHWD Y+ NM+       T  D   +A+KPMNCPG + V+ + + SYR+LP+R
Sbjct: 300 EALWHQSGHWDHYKENMYF------TNIDDGDYAIKPMNCPGGILVYKNSMHSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           L+E G V+R+E SG+LHGLMRVR FTQDDAH++ TKEQ+  E + I  LI   YK FGFE
Sbjct: 354 LSELGIVHRHELSGALHGLMRVRCFTQDDAHLYMTKEQIKEEIVGIIKLIDKFYKLFGFE 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPE  +GSD  W+ A N ++  LD+I           V  G+GAFYGPK ++
Sbjct: 414 YF-VELSTRPEDSMGSDEDWEIATNGLREALDSIGK------EYRVNEGDGAFYGPKIDF 466

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            LKD IGR WQCGTIQ+DF +P RF+  Y+ +  EK  PVM+HR ++GS+ERFIGI+IE 
Sbjct: 467 HLKDCIGRTWQCGTIQLDFQMPERFDLSYIGADGEKHRPVMVHRTIYGSVERFIGILIEQ 526

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  P WL+P+Q  +  IT +  +Y +++   LK +++ +E D RNE I YKIRE  ++
Sbjct: 527 YAGAFPTWLAPVQVKLMNITDAQYDYLKKVEEALKENNIRVEIDTRNEKIGYKIREAQLQ 586

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIP ++I GDKE     + +R         +SL + I  +  E
Sbjct: 587 KIPYMLILGDKEVEAGKVAVRSRKDGDLGAISLEEFIEKIKNE 629


>gi|163735041|ref|ZP_02142478.1| threonyl-tRNA synthetase [Roseobacter litoralis Och 149]
 gi|161391823|gb|EDQ16155.1| threonyl-tRNA synthetase [Roseobacter litoralis Och 149]
          Length = 648

 Score =  677 bits (1746), Expect = 0.0,   Method: Composition-based stats.
 Identities = 322/652 (49%), Positives = 436/652 (66%), Gaps = 10/652 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           + I LTFPDGS + F    T  DVA SIS SL KKA++  + G+  DL+ P+  + +I I
Sbjct: 2   AQISLTFPDGSAREFDAGVTAGDVAASISTSLRKKAISATVGGEHYDLAWPISADTTIAI 61

Query: 62  ITPEDP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            T +D  ++  ++RH  AHIMA AVQ IWPE +V IGP+I+DG+YYDFD+ +PFS ++L 
Sbjct: 62  HTMQDEAQANELVRHDLAHIMARAVQEIWPETKVTIGPVIKDGWYYDFDRAEPFSPEDLG 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEKKM+EII +  P   +     +A   +E+  E YKVE++++IP  E + +Y  G+W 
Sbjct: 122 LIEKKMKEIINKRDPVRTEVWDRPRAIAFYEANNEPYKVELIDAIPGDEPLRMYWHGDWQ 181

Query: 181 DLCRGPHVRSTGQ-VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           DLCRGPH++ TGQ     FKLM +AGAYWRGDS+R ML RIYG A+  +++L  +L  LE
Sbjct: 182 DLCRGPHLQHTGQVPGDAFKLMSIAGAYWRGDSDRAMLQRIYGVAFTGKEKLKAHLTMLE 241

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+ KRDHRKL REMDLFH+ E+  G +FWH  GW I+ TL  YMRRK +   Y+E+NTPQ
Sbjct: 242 EAAKRDHRKLGREMDLFHMQEEAPGQVFWHPNGWSIYTTLQDYMRRKQRAAGYQEVNTPQ 301

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW+ SGHWD Y+ +MF V+  ++  ++    ALKPMNCP HV +FN GLKSYR+L
Sbjct: 302 VVDRKLWEASGHWDKYQEHMFIVEVDEEHAREKAVNALKPMNCPCHVQIFNQGLKSYRDL 361

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFGS  R EPSG+LHG+MRVRGFTQDD H+FC ++Q+  EC      + S+Y+D 
Sbjct: 362 PLRMAEFGSCNRYEPSGALHGIMRVRGFTQDDGHIFCREDQIEAECAAFITYLSSVYQDL 421

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFEK  +  +TRPEKRVGS+  WD  E  ++  +    +         +  GEGAFYGPK
Sbjct: 422 GFEKFEIMFATRPEKRVGSEESWDHVEAALENAIKATGHP------YTLDAGEGAFYGPK 475

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++ L DAIGR+WQCGT QVD NLP R +A ++     K  P M+HRA  GS ERFIGI+
Sbjct: 476 LDFKLTDAIGREWQCGTFQVDPNLPERLDATFIGEDGAKHRPYMLHRACLGSFERFIGIL 535

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IEN  G LP WL+P Q +V +I + A +Y  ++ + LK+  +  E D RNE INYK+REH
Sbjct: 536 IENSAGKLPFWLAPRQVVVASIITDANDYVMQVVDQLKAAGVRAEADLRNEKINYKVREH 595

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDC 650
           S+ K+P+I+  G +E  E+++ +RR G   T   SL      L +E+ PPD 
Sbjct: 596 SVGKVPVILAVGAREVEEQTVTLRRLGEKKTTVESLEAVTQALGREATPPDL 647


>gi|126725645|ref|ZP_01741487.1| threonyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150]
 gi|126704849|gb|EBA03940.1| threonyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150]
          Length = 649

 Score =  677 bits (1746), Expect = 0.0,   Method: Composition-based stats.
 Identities = 330/654 (50%), Positives = 438/654 (66%), Gaps = 10/654 (1%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP+++ LTFPDG+ +  P   T  +VA  IS SL KKA++  +NG+  DL+ P+  + SI
Sbjct: 1   MPNNVTLTFPDGNTREVPAGTTAGEVASGISTSLGKKAISAQVNGEHFDLAWPIENDASI 60

Query: 60  EIITPEDPR-SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
            I T ++   +L +IRH  AH+MA AVQ++WP+V+V IGP+IE+G+YYDFD+ +PF+ ++
Sbjct: 61  AINTMKETGPALELIRHDFAHVMARAVQALWPDVKVTIGPVIENGWYYDFDRTEPFTPED 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L  IEKKM+EII        +     +A + +    E YKVE++ESIP  E + +Y  GE
Sbjct: 121 LGAIEKKMKEIINLRDVVKTEVWDRARAIQHYNDLGEPYKVELIESIPGDEPLRMYWHGE 180

Query: 179 WFDLCRGPHVRSTGQ-VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           W DLCRGPH++ TGQ     FKLM VAGAYWRGDS+R ML RIYG A+  ++ L  ++ F
Sbjct: 181 WQDLCRGPHLQHTGQLPADAFKLMSVAGAYWRGDSDRAMLQRIYGVAFQNKEGLRDHMTF 240

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINT 296
           LEE+ KRDHRKL R+MDLFH+ E+  G +FWH  GW+I+ TL  +MRRK     Y E+NT
Sbjct: 241 LEEAAKRDHRKLGRDMDLFHMQEEAPGQVFWHPNGWRIYTTLQDFMRRKQVAGGYVEVNT 300

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           PQV+D+ LW+ SGHW+ Y+ NMF V+  ++  ++    ALKPMNCP HV +FN GLKSYR
Sbjct: 301 PQVVDRKLWEASGHWEKYQENMFIVEVDEEHAREKAVNALKPMNCPCHVQIFNVGLKSYR 360

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +LP+R+AEFGS  R EPSG+LHG+MRVRGFTQDD H+FC + Q+  E       + SIYK
Sbjct: 361 DLPIRMAEFGSCNRYEPSGALHGIMRVRGFTQDDGHIFCEESQIEEETAIYIEFLTSIYK 420

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           D GFE   VK S RPE R GSD +WD AE  +      +  +    I   +  GEGAFYG
Sbjct: 421 DLGFENFRVKFSDRPEVRAGSDEVWDRAETAL------LNATRAAGIEPEMNPGEGAFYG 474

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK E++L DAIGRDWQCGT QVDF LP R +A YV     K  PVM+HRA  GS ERFIG
Sbjct: 475 PKLEFVLTDAIGRDWQCGTHQVDFVLPERLDANYVGQDGAKHRPVMLHRATLGSFERFIG 534

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           I+IE   G LP WL+P Q +V +I + A +YAQE+   L++  +  E D RNE INYK+R
Sbjct: 535 ILIEEHAGKLPFWLAPRQVVVASIVTDANDYAQEVVAELRAAGVLAEADIRNEKINYKVR 594

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDC 650
           EHS+ K+P+I+  G KE +ER++ +RR G   +    L + +P L  E+ PPD 
Sbjct: 595 EHSLGKVPVILAVGMKEVAERTVSVRRLGQKQSTVQELGEVVPALAIEATPPDL 648


>gi|261821451|ref|YP_003259557.1| threonyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
 gi|261605464|gb|ACX87950.1| threonyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
          Length = 642

 Score =  677 bits (1746), Expect = 0.0,   Method: Composition-based stats.
 Identities = 292/647 (45%), Positives = 429/647 (66%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP    +T PDGS +++    +  DVA  I   LAK  +A  ++G++ D SD +  +  +
Sbjct: 1   MPV---ITLPDGSQRHYDHAVSPLDVALDIGPGLAKACIAGRVDGELVDASDKIDTDAQL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L +IRHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D ++  + +++
Sbjct: 58  AIITAKDEAGLEIIRHSCAHLLGHAIKQLWPDTKMAIGPVIDNGFYYDVDIDRTLTQEDI 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M E+   D   +K+ +S ++AR+ F ++ E YK+ IL E+I   +   LY   E
Sbjct: 118 ELLEKRMHELADTDYDVIKKKVSWQEARDAFAARGETYKIAILDENISHDDRPGLYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KL K +GAYWRGDS   ML RIYGTAW  +++L  YL  L
Sbjct: 178 YVDMCRGPHVPNMRFCHHF-KLQKTSGAYWRGDSKNKMLQRIYGTAWADKKQLASYLQRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF+ L +++R K+K   Y+E+  P
Sbjct: 237 EEASKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEAFVRMKLKSYQYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ +W+++GHW++Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 297 FMMDRVMWEKTGHWENYKEAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  
Sbjct: 351 LPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQVRDEVNSCIKMVYDMYST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI+VKLSTRPEKR+GSD +WD AE  +   L      +++ I      GEGAFYGP
Sbjct: 411 FGFEKIVVKLSTRPEKRIGSDEMWDRAEADLAAAL------TENNIEFAYQPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF+LP R NA YV   +E+  PVMIHRA+ GS+ERFIGI
Sbjct: 465 KIEFTLHDCLDRAWQCGTVQLDFSLPGRLNASYVGESNERQVPVMIHRAILGSMERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E F G  P WL+P+Q ++  IT S  +Y  E+   L+   + ++ D RNE I +KIRE
Sbjct: 525 LTEEFAGFFPTWLAPVQVVIMNITDSQADYVNELTQKLQEAGIRVKADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H+++++P +++CGDKE     + +R         + + + I  L +E
Sbjct: 585 HTLRRVPYMLVCGDKEVEAGKVAVRTRRGKDLGSLDVSEVISKLLQE 631


>gi|157370384|ref|YP_001478373.1| threonyl-tRNA synthetase [Serratia proteamaculans 568]
 gi|166987325|sp|A8GDQ5|SYT_SERP5 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|157322148|gb|ABV41245.1| threonyl-tRNA synthetase [Serratia proteamaculans 568]
          Length = 642

 Score =  677 bits (1746), Expect = 0.0,   Method: Composition-based stats.
 Identities = 288/647 (44%), Positives = 427/647 (65%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS ++F    +  DVA  I   LAK  +A  +NG++ D  D +  +  +
Sbjct: 1   MPV---ITLPDGSQRHFDHPVSPLDVARDIGPGLAKACIAGRVNGELVDAGDLIESDAQL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L ++RHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D ++  + ++L
Sbjct: 58  AIITIKDAEGLEIMRHSCAHLLGHAIKQLWPDTKMAIGPVIDNGFYYDVDIDRTLTQEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M E+  +D   +K+ +S ++AR+ F ++ E YKV IL E+I   +   LY   E
Sbjct: 118 DLLEKRMHELADKDYDVIKKKVSWQEARDTFAARGEDYKVAILDENISHDDRPGLYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KL K +GAYWRGDS   ML RIYGTAW  +++L  YL  L
Sbjct: 178 YVDMCRGPHVPNMRFCHHF-KLQKTSGAYWRGDSKNKMLQRIYGTAWADKKQLNAYLQRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF+ L +++R K+K+  Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEAFVRMKLKEYQYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW+++GHW++Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 297 FMMDRVLWEKTGHWENYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+ EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+  E  +   ++  +Y  
Sbjct: 351 LPLRMGEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQVRAEVNECIRMVYDVYGT 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF+KI VKLSTRPEKR+G+D +W  AE  +   L      +++ I      GEGAFYGP
Sbjct: 411 FGFDKIAVKLSTRPEKRIGTDDMWTRAEEDLAAAL------TENGIPFEYQPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF LP R  A YV  ++++  PVMIHRA+ GS+ERFIGI
Sbjct: 465 KIEFTLHDCLDRAWQCGTVQLDFFLPGRLGASYVGENNDRVVPVMIHRAILGSMERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E + G  P W++P+Q +V  IT S  +Y Q++   L+   + ++ D RNE I +KIRE
Sbjct: 525 LTEEYAGFYPTWIAPVQVVVMNITDSQSDYVQQLTKKLQDAGIRVKADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H+++++P +++CGDKE     + +R         + + + +  L KE
Sbjct: 585 HTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSLDVNEVVDKLLKE 631


>gi|262374878|ref|ZP_06068112.1| threonyl-tRNA synthetase [Acinetobacter lwoffii SH145]
 gi|262309891|gb|EEY91020.1| threonyl-tRNA synthetase [Acinetobacter lwoffii SH145]
          Length = 640

 Score =  677 bits (1746), Expect = 0.0,   Method: Composition-based stats.
 Identities = 301/638 (47%), Positives = 427/638 (66%), Gaps = 15/638 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T P+G  K F    +  DVA SI   LAK  VA  +N ++ D SD +  + +++IITP+
Sbjct: 4   ITLPNGDQKQFDHAVSVMDVALSIGPGLAKNTVAGRVNDRLVDASDLITEDATLQIITPK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   + +IRHSCAH++  AV+ ++PE ++ IGP+IE+GFYYD    +PF+ D++A IE++
Sbjct: 64  DEAGVEIIRHSCAHLVGHAVKQLFPEAKMVIGPVIEEGFYYDIWMPRPFTLDDMAAIEER 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+++I +D   +K+    ++    F ++ E YK+ ++  +P +  + LY   ++ D+CRG
Sbjct: 124 MKKLIDQDYDVVKKMTPRDEVIAEFTARGEEYKLRLIADMPEETQMGLYYHQDYLDMCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +T  +K F KL K++GAYWRGD+    L RIYGTAW  +++L  Y+  +EE+EKRD
Sbjct: 184 PHVPNTKFLKSF-KLTKISGAYWRGDAKNEQLQRIYGTAWADKKQLAAYVKRIEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHL 304
           HRK+ + +DLFH+ E+  G++FWH  GW I+Q L  YMR+ +  + YEEI TPQV+D  L
Sbjct: 243 HRKIGKALDLFHMQEEAPGMVFWHPNGWTIYQVLEQYMRKVQQDNGYEEIRTPQVVDFTL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGH  +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYR+LPVRLAE
Sbjct: 303 WEKSGHAANYADNMFT------THSENRNYAVKPMNCPCHVQVFNQGLKSYRDLPVRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNEPSGSLHG+MRVRGFTQDDAH+FCTKEQ+  E      L + +YKDFGFE++ 
Sbjct: 357 FGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTKEQIGPEVADFIKLTLDVYKDFGFEEVQ 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +KLSTRPEKRVG D LWD AE  +   LD         +   +  GEGAFYGPK E+ LK
Sbjct: 417 MKLSTRPEKRVGDDKLWDMAEKSLADALDAAG------LEWELQPGEGAFYGPKIEFSLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D +GR WQCGTIQ DFNLP R +A YV   +++  PVM+HRA+ GS ERFIGI+IE++ G
Sbjct: 471 DCLGRVWQCGTIQCDFNLPERLDASYVTEDNDRDQPVMLHRAILGSFERFIGILIEHYAG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
            +P WL+P+QA V  IT S  E  + +   LK + +   +D RNE I +KIRE ++++IP
Sbjct: 531 FMPPWLAPMQACVMNITDSQAEACESVVAKLKENGIRAISDLRNEKIGFKIRERTLERIP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +++ GD+E  E ++ +R    T    +S+   + ++ 
Sbjct: 591 YLLVLGDREVEEGTVNVRTRSGTNLGTMSIDAFVDLVK 628


>gi|56460507|ref|YP_155788.1| threonyl-tRNA synthetase [Idiomarina loihiensis L2TR]
 gi|73919798|sp|Q5QYN4|SYT_IDILO RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|56179517|gb|AAV82239.1| Threonyl-tRNA synthetase [Idiomarina loihiensis L2TR]
          Length = 638

 Score =  677 bits (1746), Expect = 0.0,   Method: Composition-based stats.
 Identities = 307/647 (47%), Positives = 427/647 (65%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS + F    +  +VA  I   LAK  VA  I+G++ D  + +  +  I
Sbjct: 1   MPV---ITLPDGSQREFDKPVSIMEVAADIGAGLAKATVAGRIDGELVDACELIEHDARI 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EI+TP+D   + +IRHSCAH+M  AV+ +WP+ ++AIGP+I++GFYYD D +  F+ ++L
Sbjct: 58  EIVTPKDDDGVHIIRHSCAHLMGHAVKQMWPDAKMAIGPVIDNGFYYDIDVDHTFTQEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
            +IEK+M+E+   +   +K+  S ++ARE F  + E YK+EIL E IP      LY   E
Sbjct: 118 EKIEKRMKELAKTEYAVVKKKASWKEARETFVERHEPYKIEILDEDIPTDATPGLYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +    + F K+MK+AGAYWRGDS+  ML RIYGTAW  +++L  YL  L
Sbjct: 178 YIDMCRGPHVPNMKFCQHF-KIMKMAGAYWRGDSDNKMLQRIYGTAWADKKQLKAYLQRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+EKRDHRK+A+  DLFH  E+  G++FWH  GW IF+ L +Y+R K+++ +Y+E+  P
Sbjct: 237 EEAEKRDHRKIAKAQDLFHWQEEAPGMVFWHHNGWTIFRELETYIREKMREYEYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW++SGHW+ +   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+
Sbjct: 297 MMMDRVLWEKSGHWEKFSELMFT------TSSENREYAVKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT++Q+  E      ++   YK 
Sbjct: 351 LPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEQQVQEEVAGCIKMVYETYKT 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFE I VKLSTRPEKR+G DA WD +E  +   L        + I+   L GEGAFYGP
Sbjct: 411 FGFENIDVKLSTRPEKRLGDDATWDRSETALAQALK------NNDIDFSYLPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D +GR WQCGTIQ+DF LP R  A YV   +E+  PVMIHRA+ GS+ERF+GI
Sbjct: 465 KIEFTLFDCLGRAWQCGTIQLDFALPGRLGATYVGEDNERHTPVMIHRAILGSLERFMGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE + G+ PLWLSP Q ++  IT +  +Y +++   L    +    D RNE I +KIRE
Sbjct: 525 LIEEYAGHFPLWLSPTQVVLMNITDNQSDYVRKVVKTLNEKGIRASADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H++K++P +++ GDKE     + +R  G     K  L D I  +  E
Sbjct: 585 HTLKRVPYLLVVGDKEVEAGEVAVRTRGGEDLGKFPLEDFITRVEDE 631


>gi|91787975|ref|YP_548927.1| threonyl-tRNA synthetase [Polaromonas sp. JS666]
 gi|123059945|sp|Q12BR3|SYT_POLSJ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|91697200|gb|ABE44029.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Polaromonas sp.
           JS666]
          Length = 635

 Score =  677 bits (1746), Expect = 0.0,   Method: Composition-based stats.
 Identities = 326/643 (50%), Positives = 440/643 (68%), Gaps = 15/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            I++T PD S + +P   T ++VA SI   LAK A+   ++GKV D S  +  + ++ II
Sbjct: 1   MIQITLPDASKREYPQAVTVAEVAASIGAGLAKAALGGKVDGKVVDTSYLIEKDSALSII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   L +IRHS AH++A AV+ ++ E QV IGP+IE+GFYYDF  ++PF+ ++LA I
Sbjct: 61  TAKDADGLELIRHSTAHLLAYAVKELFSEAQVTIGPVIENGFYYDFAYKRPFTPEDLAAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M E+ A+D P  ++ L  ++A   F+S  E YK EI+ SIPA E+V+LYR+G + DL
Sbjct: 121 EKRMTELAAKDEPVTRRVLPRDEAVAHFKSIGEHYKAEIIASIPANEDVSLYREGTFEDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG++K FFKLMKVAGAYWRGD    ML R+YGTAW T+ EL QYL  LEE+E
Sbjct: 181 CRGPHVPSTGKLK-FFKLMKVAGAYWRGDHRNEMLQRVYGTAWATKDELQQYLTMLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD 301
           KRDHRKL +E+DLFHI +   G++FWH KGW I+Q +  YMR+  + + Y+E+  PQV+D
Sbjct: 240 KRDHRKLGKELDLFHIDDHAPGLVFWHPKGWTIWQGVEQYMRKVYQDNGYQEVKGPQVID 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+++GHWD YR NMF       T  + R +ALKPMNCPGH+ +F  G+KSYR+LP+R
Sbjct: 300 KTLWEKTGHWDKYRDNMFT------TESEKREYALKPMNCPGHILIFKQGIKSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
             EFG  +RNEPSG LHG+MRVRGFTQDD H+FCT+EQ+  EC+    L+  +Y DFGF+
Sbjct: 354 YGEFGQCHRNEPSGGLHGIMRVRGFTQDDGHIFCTEEQILKECVDYTTLLQKVYTDFGFK 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            I+ K++TRP+ R+GSD  WD AE  +   L              +  GEGAFYGPK EY
Sbjct: 414 NIIYKVATRPDARIGSDESWDKAEQALIESLRASGC------EFEISPGEGAFYGPKIEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            LKDAIGR WQCGT+QVDF++P R +A YV     +  PVM+HRA+ GS+ERFIGI+IE 
Sbjct: 468 TLKDAIGRQWQCGTMQVDFSMPERLDAEYVGEDGARHRPVMLHRAIVGSLERFIGILIEE 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G LP WL+PIQ  V  IT S  EYA+E+A  L++  L +  D RNE I YKIREHS++
Sbjct: 528 HAGALPTWLAPIQVSVLNITDSQAEYAREVAKTLQNQGLRVNLDLRNEKITYKIREHSLQ 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K+P I++ GDKE +  ++ +R  G+     +S+      +  +
Sbjct: 588 KLPYILVVGDKEKAAGAVAVRARGNKDLGVMSIEAFAQQIASD 630


>gi|213156053|ref|YP_002318098.1| threonyl-tRNA synthetase [Acinetobacter baumannii AB0057]
 gi|301346223|ref|ZP_07226964.1| threonyl-tRNA synthetase [Acinetobacter baumannii AB056]
 gi|301596041|ref|ZP_07241049.1| threonyl-tRNA synthetase [Acinetobacter baumannii AB059]
 gi|226701414|sp|B7I688|SYT_ACIB5 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|213055213|gb|ACJ40115.1| threonyl-tRNA synthetase [Acinetobacter baumannii AB0057]
          Length = 640

 Score =  677 bits (1746), Expect = 0.0,   Method: Composition-based stats.
 Identities = 303/638 (47%), Positives = 433/638 (67%), Gaps = 15/638 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T P+G  K+F    +  +VA+SI   LAK  VA  +N ++ D  D +  + +++IITP+
Sbjct: 4   ITLPNGDQKSFDHPVSVMEVAQSIGPGLAKNTVAGRVNDRLVDACDLITEDSTLQIITPK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  AV+ ++PE ++ IGP+IE+GFYYD    +PF+ D++A IE++
Sbjct: 64  DEEGLEIIRHSCAHLVGHAVKQLFPEAKMVIGPVIEEGFYYDIWMPRPFTLDDMAAIEER 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+++I +D   +K+    ++  ++F  + E YK+ ++E +P ++ + LY   E+ D+CRG
Sbjct: 124 MKKLIDQDYDVIKKMTPRDEVIKVFTDRGEEYKLRLVEDMPEEKAMGLYYHQEYVDMCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +T  +K F KL K++GAYWRGD+    L RIYGTAW  +++L  Y+  +EE+EKRD
Sbjct: 184 PHVPNTKFLKSF-KLTKISGAYWRGDAKNEQLQRIYGTAWADKKQLAAYIKRIEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHL 304
           HRK+ + +DLFH+ E+  G++FWH  GW I+Q L  YMR+ +  + Y+EI TPQ++D  L
Sbjct: 243 HRKIGKALDLFHMQEEAPGMVFWHANGWTIYQVLEQYMRKVQQDNGYQEIKTPQIVDFTL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGH  +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYR+LP+RLAE
Sbjct: 303 WEKSGHAANYVENMFT------THSESRNYAVKPMNCPCHVQVFNQGLKSYRDLPIRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNEPSGSLHG+MRVRGFTQDDAH+FCTKEQ+  E      L + +YKDFGFE++ 
Sbjct: 357 FGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTKEQIGKEVADFIKLTLDVYKDFGFEEVQ 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +KLSTRPEKRVG DALWD AE  +   LD         +   +  GEGAFYGPK E+ LK
Sbjct: 417 MKLSTRPEKRVGDDALWDLAEKSLADALDAAG------LEWELQPGEGAFYGPKIEFSLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D +GR WQCGTIQ DFNLP R +A YV   +E+  PVM+HRA+ GS ERFIGI+IE++ G
Sbjct: 471 DCLGRVWQCGTIQCDFNLPVRLDASYVTEENERDQPVMLHRAILGSFERFIGILIEHYAG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
            +P WLSP+QA V  IT S  E ++++   LK + L   +D RNE I +KIRE ++++IP
Sbjct: 531 FMPPWLSPVQACVMNITDSQAEASEQVVAKLKENGLRAISDLRNEKIGFKIRERTLERIP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +++ GD+E  E ++ +R         +S+   I ++ 
Sbjct: 591 YLLVLGDREVEEGTVNVRTRSGKNLGTMSVDAFIDLVK 628


>gi|117621181|ref|YP_856850.1| threonyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
 gi|166223316|sp|A0KKP9|SYT_AERHH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|117562588|gb|ABK39536.1| threonyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
          Length = 642

 Score =  677 bits (1746), Expect = 0.0,   Method: Composition-based stats.
 Identities = 296/641 (46%), Positives = 427/641 (66%), Gaps = 16/641 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  DVA  I   LAK  +A  +NG++ D  + +  + S+ IIT +
Sbjct: 4   ITLPDGSQRQFAHAVSVMDVAADIGPGLAKACIAGRVNGELVDACELIEADASLAIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L ++RHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D ++  + ++LA +E++
Sbjct: 64  DEEGLDILRHSCAHLLGHAIKQLWPQTKMAIGPVIDNGFYYDIDLDRTLTDEDLAALEER 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE-SIPAKENVTLYRQGEWFDLCR 184
           M  + A+D   +K+ +S ++AR++FE++ E YKVEIL+ +I   +   LY   E+ D+CR
Sbjct: 124 MLALAAKDYDVIKKKVSWQEARDVFEARGETYKVEILDQNIARDDQPGLYHHEEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +      F KL K++GAYWRGDSN  ML RIYGTAW  +++L  YL  LEE+ KR
Sbjct: 184 GPHVPNMRHCHHF-KLQKMSGAYWRGDSNNKMLQRIYGTAWADKKQLKSYLQRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF+ L +++R K+K+ DY+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELETFIRGKLKEYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SGHW+ Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWERSGHWEKYAQAMFT------TQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+  E      ++  +Y  FGFE I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIMEEVSACIRMVYDVYGTFGFENI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPE+R+GSD  WD      +      +    + +   +  GEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEQRIGSDEAWD------RAEAALAEALVLNGLKYDLQPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF LP R  A YV   +E+  PVMIHRA+ GS+ERFIGI+ E + 
Sbjct: 471 HDCLDRAWQCGTVQLDFALPGRLGATYVGEDNERHVPVMIHRAILGSLERFIGILTEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P QA+V  IT +  +YA ++A  L    L  + D RNE I +KIREH++K++
Sbjct: 531 GLFPTWLAPTQAVVMNITDNQADYAVKVAKALNDAGLRAKADLRNEKIGFKIREHTLKRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P +++CGDKE     I +R           + + I +LT+E
Sbjct: 591 PFMLVCGDKEVEAGKIAVRTRKGADLGTYPVEELIALLTQE 631


>gi|117923678|ref|YP_864295.1| threonyl-tRNA synthetase [Magnetococcus sp. MC-1]
 gi|259516564|sp|A0L4J6|SYT_MAGSM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|117607434|gb|ABK42889.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Magnetococcus
           sp. MC-1]
          Length = 648

 Score =  677 bits (1746), Expect = 0.0,   Method: Composition-based stats.
 Identities = 285/646 (44%), Positives = 424/646 (65%), Gaps = 16/646 (2%)

Query: 4   DIKLTFPDGSIKNFPVHA-TGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEI 61
            +++  PDGS +++     T   +A SI + LAK A+A  +NG+  DL  PV  G+ + I
Sbjct: 1   MVEIILPDGSSRSYDQETLTCGQIAASIGKGLAKAAIAGVVNGQKVDLDAPVPHGAQVAI 60

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           IT + P  L +IRHS +H+MA+AV++++P+ QV IGP IE+GFYYDFD E+PF+ D+L  
Sbjct: 61  ITEDSPEGLEIIRHSASHLMAQAVKTLFPQAQVTIGPAIENGFYYDFDYERPFTPDDLTA 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE  M+++  R+    ++ +  ++A   F++  E YK EI+ +IPA E+V+LY QGE+ D
Sbjct: 121 IENCMRKLAKRNEKVERRVMPRDEAVAYFQAMGELYKAEIIGAIPAGEDVSLYSQGEFTD 180

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG++K F K+MK  GAYWRGDS   ML RIYGTAW T+ +L  YL  +EE+
Sbjct: 181 LCRGPHVPSTGKLKAF-KVMKAGGAYWRGDSRNKMLQRIYGTAWATEADLKAYLTQMEEA 239

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQV 299
           EKRDHR++ +++DLF + ED G G++FWH +G +I + +  + + R ++  YE + TP +
Sbjct: 240 EKRDHRRIGKDLDLFSVQEDAGGGLVFWHPRGSRIRRVIEDFWKDRHVEAGYEFLYTPHI 299

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            ++ LW  SGH D Y  +MF+    D+     + + ++PMNCP H+ ++     SYRELP
Sbjct: 300 ANRQLWNTSGHTDFYSDSMFSPMEVDE-----QAYQIRPMNCPFHILIYKDRRHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
            R  E G+VYR E SG+LHGL RVRGFTQDDAH+FCT++Q+  E  +I +L + I + +G
Sbjct: 355 FRWGELGTVYRYEMSGALHGLFRVRGFTQDDAHIFCTEQQIEEEIQRILDLTLDILRTYG 414

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F    + LSTRPEK VGS A+WD A   ++  + +        ++  V  G GAFYGPK 
Sbjct: 415 FSDFEINLSTRPEKSVGSAAIWDKATEALRRAIVS------RDLSYVVDEGGGAFYGPKI 468

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +  + D+IGR WQC T+Q+DFNLP RF+  Y+    E   P+MIHRA+ GS+ERF GI++
Sbjct: 469 DVKITDSIGRKWQCSTVQLDFNLPERFDMGYIGEDGESHRPIMIHRALMGSLERFFGILV 528

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E++ G  P+WL+P+QA+V +IT +   YA+ +   LK   L +E D RNE + YKIREH+
Sbjct: 529 EHYAGWFPMWLAPVQAVVCSITDAQHAYAETVLAALKKAGLRVEIDLRNEKVGYKIREHT 588

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           +K++P +++ GDKE  E ++ +R     +   + + D +  L +E+
Sbjct: 589 LKRVPYLLVVGDKEREEGTVNVRLRSGKSLGSLPIQDVVERLVEEA 634


>gi|297617667|ref|YP_003702826.1| threonyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
 gi|297145504|gb|ADI02261.1| threonyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
          Length = 636

 Score =  676 bits (1745), Expect = 0.0,   Method: Composition-based stats.
 Identities = 278/643 (43%), Positives = 414/643 (64%), Gaps = 16/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            +++T  DG ++++P   T + V + +   L  +A+AV  NGK+ DL+ P+  +G +EI+
Sbjct: 1   MLRITLGDGKVRDYPEGTTFAQVVQDLGGRLMSEALAVRFNGKLMDLAAPIPADGRLEIL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T ED     V RHS AH+MA+AV+ ++P  ++AIGP I+ GFYYDFD EQPF+ ++  +I
Sbjct: 61  TFEDEDGREVYRHSSAHVMAQAVKRLFPGTRLAIGPAIDKGFYYDFDPEQPFTPEDFDRI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E++MQ II+ D P +++ +S E+A ELF    E YKVE++E +   E +++Y+QGE+ DL
Sbjct: 121 EQEMQSIISADYPIVRKEISREEALELFSGLGETYKVELIEGLAEGETISVYQQGEFIDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPH+ STG++K F KLM +AGAYWRGD    ML RIY T++  +  L  YLY LEE++
Sbjct: 181 CAGPHLMSTGKIKAF-KLMSLAGAYWRGDERNKMLQRIYATSFPKKSMLDDYLYKLEEAK 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLD 301
           KRDHR+L RE+ LF + ++G G  F+  KG  I   L ++ R   +K  Y+EI TP +L+
Sbjct: 240 KRDHRRLGRELGLFVVLDEGPGFPFFLPKGMIIRNELENFWRQEHVKAGYQEIKTPIILN 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW++SGHW+ YR NM+       T  D   +A+KPMNCPG + V+   L SYRELP+R
Sbjct: 300 RSLWEKSGHWEHYRENMYF------TTIDEEDYAVKPMNCPGGILVYKQNLHSYRELPIR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           L E G V+R+E SG LHGLMRVR FTQDDAH+F    Q+  E   + +++   Y+ FGF 
Sbjct: 354 LGELGLVHRHEKSGVLHGLMRVRAFTQDDAHIFMLPSQITQEIKGVIDMVDHFYRLFGFS 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LST+PEK +GSD +W+ A   ++  L+      +  +   +  G+GAFYGPK ++
Sbjct: 414 YH-VELSTKPEKAMGSDEIWEKATGALRQALE------EKGMEYKINEGDGAFYGPKIDF 466

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L+D++ R WQCGTIQ+DF +P +F+  YV    EK  PVMIHR ++GS+ERFIGI+ E+
Sbjct: 467 HLRDSLDRTWQCGTIQLDFLMPEKFDLTYVGEDGEKHRPVMIHRVIYGSLERFIGILTEH 526

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           F G  P WL+P+Q  +  IT     YA E+    +   L +E+D R+E + YKIRE  ++
Sbjct: 527 FGGAFPTWLAPVQVRIIPITERHHGYAVELEAGFREAGLRVESDLRSEKVGYKIREGQLQ 586

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +IP +++ GDKE   +++ +R+          + + +  + KE
Sbjct: 587 RIPYLLVVGDKETENKTVSVRKRKEGDLGAQPVAEFLNRIKKE 629


>gi|16124719|ref|NP_419283.1| threonyl-tRNA synthetase [Caulobacter crescentus CB15]
 gi|221233433|ref|YP_002515869.1| threonyl-tRNA synthetase [Caulobacter crescentus NA1000]
 gi|22654137|sp|Q9AAX8|SYT_CAUCR RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|254783515|sp|B8GZS7|SYT_CAUCN RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|13421637|gb|AAK22451.1| threonyl-tRNA synthetase [Caulobacter crescentus CB15]
 gi|220962605|gb|ACL93961.1| threonyl-tRNA synthetase [Caulobacter crescentus NA1000]
          Length = 655

 Score =  676 bits (1745), Expect = 0.0,   Method: Composition-based stats.
 Identities = 323/656 (49%), Positives = 435/656 (66%), Gaps = 18/656 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR------EG 57
            I L FPDGS + +P  ATG DVA +IS+SL KKA+ + ++G+V DL   +       E 
Sbjct: 1   MIDLVFPDGSSRQYPDGATGRDVAAAISKSLEKKALLIKLDGQVLDLDRRLTPDLLTGER 60

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSD 117
             EI+T E P +L  IRH  AH++AEAVQ ++P  QV IGP +EDGFYYDF +++PFS D
Sbjct: 61  KFEILTREAPEALDTIRHDTAHVLAEAVQELFPGTQVTIGPNVEDGFYYDFARDEPFSLD 120

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +L +IEK+M+EI+ RD    ++     +A   F+   E YK +I+  +P  + +T+YRQG
Sbjct: 121 DLEKIEKRMKEIVDRDEKITREVWDRNEAIAHFDGIGEQYKAQIIRDLPDTDTITVYRQG 180

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
            W DLCRGPH+ ST  V K FKL K+AGAYWRGD N   L RIYGTAW ++ +L  +L  
Sbjct: 181 NWKDLCRGPHLPSTKHVGKAFKLTKLAGAYWRGDQNNAQLQRIYGTAWASEADLEAHLKR 240

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
           +EE+EKRDHRKL + MDLFHI E+G G++FWH KGW +++ L  YMRR++    Y+E+ T
Sbjct: 241 IEEAEKRDHRKLGKTMDLFHIQEEGKGMVFWHPKGWALYRVLEDYMRRRLDAAGYKEVKT 300

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           PQ+LD+ LW++SGH + +   MF  + A     +    A+KPMNCPGH+ +FN G KSYR
Sbjct: 301 PQILDRSLWEKSGHAEKFGHAMFMCESA-----EGEVLAVKPMNCPGHIQIFNVGQKSYR 355

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ELP+R+AEFG+ +R EPSG++HG+MRVR FTQDDAH+FC +EQ+  E  +   L+ S+Y 
Sbjct: 356 ELPLRMAEFGACHRYEPSGAMHGIMRVRAFTQDDAHIFCREEQVTEESARFIELLRSVYN 415

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           D G      K STRPE R G+D  WD AE  +    +    +        +  GEGAFYG
Sbjct: 416 DLGMTLADTKFSTRPELRAGTDETWDKAEAALAAAAEAAGET------LTLQPGEGAFYG 469

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK E+ LKDAIGR WQCGT+Q+DF LP R +A YV+    K  PVM+HRA+ GS ERFIG
Sbjct: 470 PKLEFSLKDAIGRVWQCGTLQLDFVLPERLDAEYVSEDGSKKRPVMLHRAILGSFERFIG 529

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           I++ENF G LP+WL+P Q +V TITS A +YA+E+   L    +  E D RNE INYKIR
Sbjct: 530 ILLENFAGALPVWLAPTQVVVATITSDADDYAREVVEKLTKLGMRAELDLRNEKINYKIR 589

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           EHS+ K+P+I + G KEA    + +RR G      +SL +A+ +L  ++ PPD  +
Sbjct: 590 EHSLAKVPVIAVVGRKEAETGQLALRRLGGEGQSVLSLEEALRVLKSDATPPDVAR 645


>gi|109898814|ref|YP_662069.1| threonyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
 gi|109701095|gb|ABG41015.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase
           [Pseudoalteromonas atlantica T6c]
          Length = 638

 Score =  676 bits (1745), Expect = 0.0,   Method: Composition-based stats.
 Identities = 304/641 (47%), Positives = 427/641 (66%), Gaps = 16/641 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  DVA  I   LAK  +A  ++G   D  D +  +  ++IIT +
Sbjct: 4   ITLPDGSQRQFDNAVSVLDVANDIGPGLAKATIAGKVDGVRVDACDLIEQDAQLQIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ +WP+V++AIGP I++GFYYD D E   + ++L ++EK+
Sbjct: 64  DDDGLEIIRHSCAHLIGHAIKQLWPDVKMAIGPTIDNGFYYDIDMEHSLNDEDLVKLEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K+ +S ++AR+ FE++ E YK++IL E+IP      LY   E+ D+CR
Sbjct: 124 MLELAKTNYDVVKKVVSWQEARDTFEARGEEYKLQILDENIPKDATPGLYHHEEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +    + F KLMKVAGAYWRGDS+  ML RIYGTAW  +++L  YL  LEE+EKR
Sbjct: 184 GPHVPNMRFCQHF-KLMKVAGAYWRGDSDNKMLQRIYGTAWADKKQLKAYLNRLEEAEKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ + +DLFH  E+  G++FWH  GW I+  L  ++R K+++ +Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKALDLFHWQEEAPGMVFWHNDGWSIYTELEKFVRSKLREYEYDEVKAPLMMDRS 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SGHWD Y  NMF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKSGHWDKYAENMFT------TTSEKREYAVKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFG  +RNEPSG+LHGLMRVRGFTQDDAH+FCT +Q+  E     + +  IYK FGFE I
Sbjct: 357 EFGCCHRNEPSGALHGLMRVRGFTQDDAHIFCTDDQILAEVGGCIDSVYEIYKIFGFENI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPEKRVGSD +WD AE  +   L +        I+   L GEGAFYGPK E+ L
Sbjct: 417 SVKLSTRPEKRVGSDEVWDKAEKELAEALTS------KGIDFQYLPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF++P R  + YV    E+  PVMIHRA+ GS+ERFIGI+IE + 
Sbjct: 471 HDCLDRAWQCGTVQLDFSMPGRLGSTYVAEDGERKVPVMIHRAILGSLERFIGILIEEYS 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  PLWL+P QA+V  IT +  EYAQ++   LK   +  ++D RNE I +KIREH+++++
Sbjct: 531 GFFPLWLAPTQAVVMNITDNQSEYAQKVVKKLKEIGIRAKSDLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P +++ GDKE     I +R        K+S+   I +  ++
Sbjct: 591 PYLLVVGDKEIEAGEIAVRSRKGDDLGKMSVDAFIELACEQ 631


>gi|310640050|ref|YP_003944808.1| ser-tRNA(thr) hydrolase / threonyl-tRNA synthetase [Paenibacillus
           polymyxa SC2]
 gi|309245000|gb|ADO54567.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Paenibacillus
           polymyxa SC2]
          Length = 637

 Score =  676 bits (1745), Expect = 0.0,   Method: Composition-based stats.
 Identities = 283/645 (43%), Positives = 422/645 (65%), Gaps = 18/645 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEII 62
            I++  PDG+++ +    T +DVA SIS  L K AVA  +NGK  DL+  + E   +EII
Sbjct: 2   SIQVKLPDGAVREYEQGVTIADVAGSISSGLKKNAVAGKVNGKAVDLNTVLDENVDLEII 61

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPE--VQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           T +    L + RHS AH++A+A++ I+ E  V++ IGP+I+ GFYYD D E P S D+LA
Sbjct: 62  TLDGADGLEIYRHSTAHLLAQALKRIYGEKNVKLGIGPVIDSGFYYDIDIENPLSVDDLA 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IEK+M +I   + P  ++ +S E+A  +F   ++  K+E++  +P +  +T+Y QGE+F
Sbjct: 122 KIEKEMAKITQENLPITRRVVSREEATRIFGEMEDPLKLELIRDLPEEAEITIYDQGEFF 181

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ STG++K F KL+ VAGAYWRGDSN  ML RIYGTA+  + +L ++L+ LEE
Sbjct: 182 DLCRGPHLPSTGRIKAF-KLLSVAGAYWRGDSNNKMLQRIYGTAFPKKAQLDEHLHLLEE 240

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           ++KRDHRKL +E++LF  +E+  G+ F+  KG  +   L  Y R  +    YEE+ TP +
Sbjct: 241 AKKRDHRKLGKELELFMFSEEAPGMPFYLPKGMVVRTALEDYSRDIQRLHGYEEVRTPLM 300

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           ++  LW+QSGH++ Y+ NM+  +       D  TFALKPMNCPGH+ VF + L SYR+LP
Sbjct: 301 MNNRLWEQSGHYEHYKENMYFSEV------DETTFALKPMNCPGHMLVFKNELHSYRDLP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R++EFG V+R+E SG+L+G+MRVR F QDDAH+F T  Q+  E   +  LI  +Y  FG
Sbjct: 355 IRISEFGQVHRHELSGALNGMMRVRTFCQDDAHIFVTPGQIEKEITDVIKLINEMYSVFG 414

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F    V+LSTRP+  +G  ALWD AE  ++ VLD +       IN  +  G+GAFYGPK 
Sbjct: 415 F-DFTVELSTRPDDFMGEPALWDQAEQALQNVLDHLG------INYRINAGDGAFYGPKI 467

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           ++ + DA+ R WQCGTIQ+DF +P +F+  YV   ++K  PV+IHRA++GSI+RF+GI+ 
Sbjct: 468 DFHILDALKRSWQCGTIQLDFQMPEKFDLTYVGEDNQKHRPVVIHRAIYGSIDRFMGILT 527

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E+F G  PLWL+P+ A +  ++ + +E A E+   L    L +E D RNE + YKIRE  
Sbjct: 528 EHFTGAFPLWLAPVHAKLLPVSENYIETANEVQEALLKAGLRVEVDTRNEKLGYKIREAQ 587

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           ++K+P + + G+ E +  ++ +R+ G       S+ D +  ++ E
Sbjct: 588 LEKVPYMFVIGENEKTTGTVAVRKRGEGDLGSFSIADIVEKISTE 632


>gi|114328278|ref|YP_745435.1| threonyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1]
 gi|122326764|sp|Q0BRP0|SYT_GRABC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|114316452|gb|ABI62512.1| threonyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1]
          Length = 642

 Score =  676 bits (1745), Expect = 0.0,   Method: Composition-based stats.
 Identities = 325/655 (49%), Positives = 450/655 (68%), Gaps = 16/655 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP+   +T PDGS++++    TG+ +A  I   LA+ A+A+ ++G++ DLS  +  +  +
Sbjct: 1   MPA---ITLPDGSVRHYDAPVTGTTIAADIGPGLARAALAMKVDGRMMDLSRAIAADAQV 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
             +T +D  +L +IRH  AH++AEAVQ ++P  QV IGP IE+GFYYDF + +PF+ ++L
Sbjct: 58  VFVTRKDEAALEMIRHDAAHVLAEAVQELFPGTQVTIGPSIENGFYYDFARNEPFTPEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IE KM+EIIAR++PF ++    + A   F+ K E YK ++++ +P  E +T+YRQGEW
Sbjct: 118 PAIEAKMREIIARNAPFEREVWDRQDAIRFFQDKGEKYKAQLIQDLPDTETITVYRQGEW 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPH+RSTG +   F+LMKVAGAYWRGD    MLSRIYGTAW  Q+EL  YL+ LE
Sbjct: 178 LDLCRGPHMRSTGDIGPAFRLMKVAGAYWRGDHRNAMLSRIYGTAWRDQKELDAYLHQLE 237

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           E+E+RDHR+L +EMDLFHI E+  G IFWH+KGW++++ L +YM RR+I+  YEE+ TPQ
Sbjct: 238 EAERRDHRRLGKEMDLFHIQEEAVGSIFWHKKGWRLYRALENYMRRRQIEAGYEEVRTPQ 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D+ LW+ SGHWD YR +MF     D    + +T ALKPMNCP HV +F HGL+SY+EL
Sbjct: 298 LVDRSLWEDSGHWDKYREHMFIATVED----EEKTLALKPMNCPCHVQIFRHGLRSYKEL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG+ +R EPSG+LHG+MRVR FTQDDAH+FC  EQ+  E      ++ S+Y+D 
Sbjct: 354 PLRMAEFGACHRYEPSGALHGIMRVRSFTQDDAHIFCMPEQIAKETADFVAMLASVYRDL 413

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+   VK + RPE R G D  WD AE+ ++             +   +  GEGAFYGPK
Sbjct: 414 GFDSFRVKFADRPESRAGKDEDWDRAEHELREACRLAG------VEYELNPGEGAFYGPK 467

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E++L+DAIGRDWQCGT+QVD+ LP R NA YV     +  PVM+HRA+ GS ERFIGI+
Sbjct: 468 LEFVLRDAIGRDWQCGTLQVDYVLPERLNAEYVAEDGARRRPVMLHRAILGSFERFIGIL 527

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLS-IETDFRNETINYKIRE 597
           IE + G  PLWL+P+  +V  I S A  YA E+   LK   ++  E D RNE IN KIRE
Sbjct: 528 IEQYAGRFPLWLAPVPVVVAPIVSDANAYAMEVVTALKRAGVTWAEADLRNEKINAKIRE 587

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           HS+  +P+I++ G +EA +R + +RR GS   Q ++L +AI  L  E+ PPD ++
Sbjct: 588 HSLAHVPVILVVGRREAEQRQVALRRLGSQEQQVMALDEAISALATEATPPDLRQ 642


>gi|222110646|ref|YP_002552910.1| threonyl-tRNA synthetase [Acidovorax ebreus TPSY]
 gi|254783520|sp|B9MHX8|SYT_DIAST RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|221730090|gb|ACM32910.1| threonyl-tRNA synthetase [Acidovorax ebreus TPSY]
          Length = 639

 Score =  676 bits (1745), Expect = 0.0,   Method: Composition-based stats.
 Identities = 325/647 (50%), Positives = 441/647 (68%), Gaps = 19/647 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEII 62
            I +T PDGS + F    T ++VA SI   LAK A+A  I  KV D S  + + S + I+
Sbjct: 1   MIHITLPDGSQREFAGPVTVAEVAASIGSGLAKAALAGKIGDKVVDTSYQITQDSPLSIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   L VIRHS AH++A AV+ ++P+ QV IGP+IE+GFYYDF  ++PF+ ++LA I
Sbjct: 61  TAKDADGLEVIRHSTAHLLAYAVKELFPDAQVTIGPVIENGFYYDFSYKRPFTPEDLAAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M E+ A+D P +++ L  ++A   F+   E YK EI+ SIP  E+V+LYR+G + DL
Sbjct: 121 EKRMAELAAKDEPVVRRVLPRDEAVAYFKGLGEHYKAEIIASIPTNEDVSLYREGGFEDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG++K FFKLMKVAGAYWRGD    ML R+YGTAW T++EL QYL+ LEE+E
Sbjct: 181 CRGPHVPSTGKLK-FFKLMKVAGAYWRGDHRNEMLQRVYGTAWATKEELQQYLHMLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD 301
           KRDHRKL RE+DLFHI E   G +FWH KGW ++Q +  YMRR  + + Y+E+  PQ+LD
Sbjct: 240 KRDHRKLGRELDLFHIDEHSPGTVFWHPKGWTLWQEVEQYMRRVYRDNGYQEVKGPQILD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+++GHWD YR NMF       T  + R +ALKPMNCPGH+ +F  G+KSYR+LP+R
Sbjct: 300 KTLWEKTGHWDKYRDNMFT------TESEKRDYALKPMNCPGHILIFKQGIKSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
             EFG  +RNEP+G LHG+MRVRGFTQDD H+FCT++ +  EC     L+  +YK+FGF 
Sbjct: 354 YGEFGQCHRNEPTGGLHGIMRVRGFTQDDGHIFCTEDHILAECTAYTALLQKVYKNFGFH 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            I+ K++TRPE R+GSD  WD AE+ +   L              +  G+GAFYGPK EY
Sbjct: 414 NIIYKVATRPEARIGSDESWDKAEHALMESLRASGC------EFEIAPGDGAFYGPKIEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            LKDAIGR WQCGT+QVDF++P R +A YV     +  PVM+HRA+ GS+ERFIGI+IE 
Sbjct: 468 TLKDAIGRQWQCGTMQVDFSMPERLDAEYVGEDGGRHRPVMLHRAIVGSLERFIGILIEE 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSH----HLSIETDFRNETINYKIRE 597
             G LP+WL+P+Q  V  IT +  +Y +EIA  L+       L + TD RNE I YKIRE
Sbjct: 528 HAGALPVWLAPVQVAVLNITDAQQDYCREIAAKLQKALPNQGLRVVTDLRNEKITYKIRE 587

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           HS++K+P I++ GDKE +  ++ +R  G+     +SL   + ++ ++
Sbjct: 588 HSLQKLPYILVAGDKEKAAGAVAVRARGNKDLGVMSLDAFVDLIAQD 634


>gi|212635267|ref|YP_002311792.1| threonyl-tRNA synthetase [Shewanella piezotolerans WP3]
 gi|226701407|sp|B8CME8|SYT_SHEPW RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|212556751|gb|ACJ29205.1| Threonyl-tRNA synthetase, class IIa [Shewanella piezotolerans WP3]
          Length = 642

 Score =  676 bits (1745), Expect = 0.0,   Method: Composition-based stats.
 Identities = 289/647 (44%), Positives = 421/647 (65%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP    +T PDGS + F    +  DVA  I   LAK  +A  +NG++ D  D +  +  +
Sbjct: 1   MPV---ITLPDGSKREFAQPVSTLDVAADIGPGLAKACIAGRVNGELKDACDIIDTDSEL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   + ++RHSCAH++  A + +WPE ++AIGP+I++GFYYD D +   + +++
Sbjct: 58  SIITAKDEEGVEILRHSCAHLLGHAFKQLWPEAKMAIGPVIDNGFYYDIDLDHKLTQEDI 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             ++K+M ++   +    K+ +S ++AR+ FE++ E+YK+EIL E+I       LY   E
Sbjct: 118 DALQKRMTQLAKTNYAVDKRVVSWQEARDTFEARGESYKIEILDENISKDATPALYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +    + F KLM VAGAYWRG+S+  ML RIYGTAW  ++ L  +L  L
Sbjct: 178 YVDMCRGPHVPNMKFCQNF-KLMSVAGAYWRGNSDNKMLQRIYGTAWADKKALKVHLNRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW +F  L  ++R+K+ +  Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWSLFLELEKFIRQKLGQYTYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+
Sbjct: 297 LMMDRVLWERSGHWDKYADGMFT------TNSESREYAIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFG  +RNEPSGSLHGLMRVRGFTQDDAHVFCT+EQ+  E      ++   Y+ 
Sbjct: 351 LPLRMAEFGCCHRNEPSGSLHGLMRVRGFTQDDAHVFCTEEQVQQEVSACIQMVYDTYET 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF+ I+VKLSTRPEKR+G D +WD AE  +K  L +      + I   +L GEGAFYGP
Sbjct: 411 FGFKNIVVKLSTRPEKRIGDDDMWDRAEEALKQALKS------NDIEFEILPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+D+ LP R  A YV   + +  PVMIHRA+ GS+ERF+GI
Sbjct: 465 KIEFTLHDCLDRAWQCGTVQLDYALPGRLGATYVAEDNSRQTPVMIHRAILGSLERFLGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE + G  P WL+P Q +V  IT    +YA+E+ NL K H +    D RNE I +KIRE
Sbjct: 525 LIEEYAGKFPTWLAPQQVVVMNITDKQSDYAEEVVNLFKEHGIRATKDLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H+++++P +++ GD+E   + + +R        K+ + +    L  +
Sbjct: 585 HTLRRVPYLLVVGDQEMENKEVAVRTREGVDLGKMQIQEFATKLKNQ 631


>gi|255526047|ref|ZP_05392970.1| threonyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|255510233|gb|EET86550.1| threonyl-tRNA synthetase [Clostridium carboxidivorans P7]
          Length = 638

 Score =  676 bits (1745), Expect = 0.0,   Method: Composition-based stats.
 Identities = 290/643 (45%), Positives = 417/643 (64%), Gaps = 16/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            +K+T  DGS+         +DVA  +S SLAKKA+   I+G+  +L   V  +  +EI+
Sbjct: 1   MVKITLKDGSLIEVEKGTKVADVAAKLSTSLAKKALGAKIDGERAELMAEVNNDCKLEIL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D     ++RH+ +HI+A+AV+ ++PEV++AIGP I+ GFYYDFD E  F+ + L +I
Sbjct: 61  TFDDEDGKWILRHTGSHILAQAVKKVYPEVKLAIGPAIDTGFYYDFDAEFSFTPEMLEKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M +II  +    +  L  E+A +L + KKE YKVE+++ +P    ++ Y+QG++ DL
Sbjct: 121 EVEMNKIIKENLKLERFELPREEAIKLMQEKKECYKVELIKDLPEDAVISFYKQGDFVDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPHV STG+VK   KL+ +AGAYW+GD    ML RIYGTA+  + +L  YL  LEE++
Sbjct: 181 CAGPHVPSTGKVK-AVKLLSIAGAYWKGDEKNKMLQRIYGTAFEKKADLDAYLNMLEEAK 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KRDHRKL +E+DLF + E+G G  F+H KG  I  TL ++ R      DY+EI TP +L+
Sbjct: 240 KRDHRKLGKELDLFSMHEEGPGFPFFHPKGMIIRNTLQNFWREMHSAADYDEIMTPVILN 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+QSGHWD Y+ NM+  K       D   +A+KPMNCPG + V+ + + SYRELP+R
Sbjct: 300 EKLWRQSGHWDHYKENMYFTKI------DNEDYAIKPMNCPGSILVYKNTIHSYRELPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
            AE G  +R+E SG+LHGLMRVR FTQDDAH+F  K+ + +E + +  LI   YK FGFE
Sbjct: 354 YAEMGLAHRHEKSGALHGLMRVRCFTQDDAHMFLAKDNITDEIVNVIKLIDDFYKVFGFE 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPE  +GSD  W+ A N ++  LDTI       +   V  G+GAFYGPK ++
Sbjct: 414 YF-VELSTRPEDSMGSDEDWEAATNGLRKALDTIG------LKYKVNEGDGAFYGPKIDF 466

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L+D IGR WQCGT+Q+DF +P RF+  Y+ +  EK  PVM+HR VFGS+ERFIGI+IE+
Sbjct: 467 HLRDCIGRTWQCGTVQLDFQMPERFDLTYIGADGEKHRPVMVHRVVFGSVERFIGILIEH 526

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  P WL+P+Q  +  IT   ++YA ++A  LK + + +E D RNE I YKIRE  ++
Sbjct: 527 YAGAFPAWLAPVQVKIMNITDDQIDYANKVAKELKKNKIRVEVDLRNEKIGYKIREAQLQ 586

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K+P +++ GDKE  E ++ +R         ++L   +  +  E
Sbjct: 587 KVPYMLVLGDKEMKENTVAVRSRKLGDLGAMALDQFVEKIKGE 629


>gi|312881548|ref|ZP_07741334.1| threonyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309370825|gb|EFP98291.1| threonyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 642

 Score =  676 bits (1745), Expect = 0.0,   Method: Composition-based stats.
 Identities = 298/642 (46%), Positives = 426/642 (66%), Gaps = 17/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  DVA+SI   LAK  +A  ++G+  D  D +  + S+EIIT +
Sbjct: 4   ITLPDGSQRQFDNPVSTLDVAQSIGPGLAKATIAGRVDGQRVDACDLIEQDASLEIITVK 63

Query: 66  DP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  A++ ++PE ++AIGP I+ GFYYD D EQ  + ++L +IEK
Sbjct: 64  DEVDGLEIVRHSCAHLLGHAIKQLYPEAKMAIGPTIDSGFYYDIDLEQSLTQEDLEKIEK 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLC 183
           +M+E+       +K+ +S ++AR+ FE ++E YK+EIL E++   +   LY   E+ D+C
Sbjct: 124 RMKELAKTKYAVVKKKVSWQEARDAFEGRRETYKMEILDENVSRDDRPGLYHHEEYIDMC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV   G  + F  L  +AGAYWRG+S+  ML RIYGTA++ ++ L  +L  LEE+ K
Sbjct: 184 RGPHVPHMGFCQHFTLL-SIAGAYWRGNSDNKMLQRIYGTAFHDKKALKAHLTRLEEAAK 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRK+ +++DLFH+ ++  G++FWH  GW IF+ L  ++R K+ + DY+E+  P ++D+
Sbjct: 243 RDHRKIGKQLDLFHMQQEAPGMVFWHHNGWSIFRDLEVFVREKLTEYDYQEVKGPLIMDR 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y   MF       T  + R +ALKPMNCPGHV +FN GLKSYR+LP+R+
Sbjct: 303 VLWERSGHWDKYADAMFT------TASENRDYALKPMNCPGHVQIFNQGLKSYRDLPLRM 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHG+MRVRGFTQDDAH+FCT+ Q+  E      ++   Y+ FGF  
Sbjct: 357 AEFGSCHRNEPSGALHGIMRVRGFTQDDAHIFCTESQIQEEVTSCIKMVYDTYETFGFSN 416

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I VKLSTRPEKRVGSD +WD++E  +K  L+ +       I   +  GEGAFYGPK E+ 
Sbjct: 417 IAVKLSTRPEKRVGSDEIWDESEQALKQSLEAM------DIPYEIQEGEGAFYGPKIEFT 470

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D + R WQCGT+Q+DFNLP R  A YV+ ++E+  PVMIHRA+ GS+ERFIGI+IE +
Sbjct: 471 LHDCLDRAWQCGTVQLDFNLPGRLGATYVDENNERQVPVMIHRAILGSLERFIGILIEEY 530

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WLSP QAI+  IT    +Y  E+A  L+   +  + D RNE I +KIREH++K+
Sbjct: 531 YGFFPTWLSPEQAIIMNITDKQSDYVHEVAQKLQKCGIRAKADLRNEKIGFKIREHTLKR 590

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P +++CGD+E     I +R        K  + D +  +  E
Sbjct: 591 VPYMLVCGDQEMEAGEIAVRTRKGKDLGKFKVDDFVSYIQDE 632


>gi|291327048|ref|ZP_06126787.2| threonine--tRNA ligase [Providencia rettgeri DSM 1131]
 gi|291311980|gb|EFE52433.1| threonine--tRNA ligase [Providencia rettgeri DSM 1131]
          Length = 653

 Score =  676 bits (1745), Expect = 0.0,   Method: Composition-based stats.
 Identities = 299/647 (46%), Positives = 425/647 (65%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS + F    +  DVA  I   LAK  +A  ING+  D  + +  + ++
Sbjct: 12  MPV---ITLPDGSQRQFDHPVSVMDVARDIGAGLAKACIAGRINGERVDACEIIEHDANV 68

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L +IRHSCAH++  A++ +WP  ++AIGP I++GFYYD D +   + ++L
Sbjct: 69  SIITSKDEDGLEIIRHSCAHLLGHAIKQLWPNTKMAIGPTIDNGFYYDVDLDHMLTQEDL 128

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE-SIPAKENVTLYRQGE 178
            ++EK+M E+   D   +K+ +S  +ARE F ++ E YKVEIL+ +I   +   LY   E
Sbjct: 129 EKLEKRMLELAKTDYDVVKKRVSWSEARETFVARGEDYKVEILDQNISQDDRPGLYHHEE 188

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KL KVAGAYWRG+S+  ML RIYGTAW  +++L  YL  L
Sbjct: 189 YVDMCRGPHVPNMRFCHHF-KLQKVAGAYWRGNSDNKMLQRIYGTAWADKKQLAAYLLRL 247

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G+ FWH  GW IF+ L +++R K+K  +Y+E+  P
Sbjct: 248 EEAAKRDHRKIGKQLDLYHMQEEAPGMAFWHNDGWTIFRELETFVRTKLKAYNYQEVKGP 307

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW+++GHWD+Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 308 FMMDRVLWEKTGHWDNYKDAMFT------TSSENREYCVKPMNCPGHVQIFNQGLKSYRD 361

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT+EQ+ +E      +I  +Y  
Sbjct: 362 LPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQILSEVTSCIEMIYDVYAT 421

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI+VKLSTRPEKR+G+D +WD AE  +   L +        I      GEGAFYGP
Sbjct: 422 FGFEKIVVKLSTRPEKRIGTDEMWDRAEEDLANALKS------KGIEFEYQPGEGAFYGP 475

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF LP R  A YV  ++E+  PVMIHRAV GS+ERFIGI
Sbjct: 476 KIEFTLYDCLDRAWQCGTVQLDFFLPGRLTASYVGENNERIVPVMIHRAVLGSLERFIGI 535

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E + G  P WL+P Q +V  IT S  +Y QE+ + L+S  +  + D RNE I +KIRE
Sbjct: 536 LTEEYAGFFPTWLAPQQVVVMNITDSQADYVQELVSKLQSVGIRAKADLRNEKIGFKIRE 595

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H+++++P +++CGDKE     + +R         + + + +  L +E
Sbjct: 596 HTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSLDVNEFMTKLLEE 642


>gi|121594741|ref|YP_986637.1| threonyl-tRNA synthetase [Acidovorax sp. JS42]
 gi|166223314|sp|A1W8I6|SYT_ACISJ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|120606821|gb|ABM42561.1| Ser-tRNA(Thr) hydrolase [Acidovorax sp. JS42]
          Length = 639

 Score =  676 bits (1745), Expect = 0.0,   Method: Composition-based stats.
 Identities = 326/647 (50%), Positives = 441/647 (68%), Gaps = 19/647 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEII 62
            I +T PDGS + F    T ++VA SI   LAK A+A  I  KV D S  + + S + I+
Sbjct: 1   MIHITLPDGSQREFAGPVTVAEVAASIGSGLAKAALAGKIGDKVVDTSYQITQDSPLSIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   L VIRHS AH++A AV+ ++P+ QV IGP+IE+GFYYDF  ++PF+ ++LA I
Sbjct: 61  TAKDADGLEVIRHSTAHLLAYAVKELFPDAQVTIGPVIENGFYYDFSYKRPFTPEDLAAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M E+ A+D P +++ L  ++A   F+   E YK EI+ SIP  E+V+LYR+G + DL
Sbjct: 121 EKRMAELAAKDEPVVRRVLPRDEAVAYFKGLGEHYKAEIIASIPTNEDVSLYREGGFEDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG++K FFKLMKVAGAYWRGD    ML RIYGTAW T++EL +YL+ LEE+E
Sbjct: 181 CRGPHVPSTGKLK-FFKLMKVAGAYWRGDHRNEMLQRIYGTAWATKEELQEYLHMLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD 301
           KRDHRKL RE+DLFHI E   G +FWH KGW ++Q +  YMRR  + + Y+E+  PQ+LD
Sbjct: 240 KRDHRKLGRELDLFHIDEHSPGTVFWHPKGWTLWQEVEQYMRRVYRDNGYQEVKGPQILD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+++GHWD YR NMF       T  + R +ALKPMNCPGH+ +F  G+KSYR+LP+R
Sbjct: 300 KTLWEKTGHWDKYRDNMFT------TESEKRDYALKPMNCPGHILIFKQGIKSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
             EFG  +RNEP+G LHG+MRVRGFTQDD H+FCT++ +  EC     L+  +YKDFGF 
Sbjct: 354 YGEFGQCHRNEPTGGLHGIMRVRGFTQDDGHIFCTEDHILAECTAYTALLQKVYKDFGFH 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            I+ K++TRPE R+GSD  WD AE+ +   L              +  G+GAFYGPK EY
Sbjct: 414 NIIYKVATRPEARIGSDESWDKAEHALMESLRASGC------EFEIAPGDGAFYGPKIEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            LKDAIGR WQCGT+QVDF++P R +A YV     +  PVM+HRA+ GS+ERFIGI+IE 
Sbjct: 468 TLKDAIGRQWQCGTMQVDFSMPERLDAEYVGEDGGRHRPVMLHRAIVGSLERFIGILIEE 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSH----HLSIETDFRNETINYKIRE 597
             G LP+WL+P+Q  V  IT +  +Y +EIA  L+       L + TD RNE I YKIRE
Sbjct: 528 HAGALPVWLAPVQVAVLNITDAQQDYCREIAAKLQKALPNQGLRVVTDLRNEKITYKIRE 587

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           HS++K+P I++ GDKE +  ++ +R  G+     +SL   + ++ ++
Sbjct: 588 HSLQKLPYILVAGDKEKAAGAVAVRARGNKDLGVMSLDAFVDLIAQD 634


>gi|220928797|ref|YP_002505706.1| threonyl-tRNA synthetase [Clostridium cellulolyticum H10]
 gi|219999125|gb|ACL75726.1| threonyl-tRNA synthetase [Clostridium cellulolyticum H10]
          Length = 635

 Score =  676 bits (1745), Expect = 0.0,   Method: Composition-based stats.
 Identities = 284/643 (44%), Positives = 407/643 (63%), Gaps = 16/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            I +T  DG++K +    T  +VAESIS  LA+ ++   ++GKV +L   +  + S+ ++
Sbjct: 1   MISITLKDGTVKEYQKGVTVLEVAESISAGLARVSLVGEVDGKVTELDFKLERDCSLNLL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T ED       RH+ +H++A+AV+ ++P+ ++AIGP I+ GFYYDF++E+PFS +EL  I
Sbjct: 61  TFEDEGGRLAYRHTASHVLAQAVKRLYPDAKLAIGPAIDTGFYYDFEREKPFSIEELDSI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M++I+  D    +  L   +A +L E K E YK E++  +P  E ++ Y+QGE+ DL
Sbjct: 121 EKEMEKIVKEDLKLERFVLPRNEAIKLMEEKGEPYKAELIMDLPQGEEISFYKQGEFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPH+  TG++K   KL+ VAGAYWRG+    ML RIYGTA+  + +L +YL+ +EE++
Sbjct: 181 CAGPHLTGTGRLK-AVKLLSVAGAYWRGNEKNKMLQRIYGTAFPKKSQLDEYLFRIEEAK 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLD 301
           KRDHRKL RE+DLF I ++G G  F+  KG  +   L  Y R    K  Y+EI TP +L+
Sbjct: 240 KRDHRKLGRELDLFDILDEGPGFPFFMPKGMVLRNLLEDYWRSEHKKAGYQEIKTPVILN 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW +SGHWD+Y+ NM+ V        D +  A+KPMNCPG + VF   L SYR+LP R
Sbjct: 300 KELWLRSGHWDNYKNNMYTV------AIDEQDCAIKPMNCPGGILVFKRKLHSYRDLPQR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           + E G V+R+E SG+LHGLMRVR FTQDDAH+F T EQ+ +E   + NLI   Y  FGF+
Sbjct: 354 MGELGLVHRHELSGALHGLMRVRCFTQDDAHIFMTPEQITDEVTGVINLIDDFYSVFGFK 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPEK +GSD +W+ +   +K  LD      +  I   +  G+GAFYGPK ++
Sbjct: 414 YN-VELSTRPEKSIGSDEMWELSTAGLKKALD------EKGIKYTINKGDGAFYGPKIDF 466

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L+D+IGR WQCGTIQ+D NLP RF+  Y+    EK  PVM+HR VFGSIERFI I+ E+
Sbjct: 467 HLEDSIGRTWQCGTIQLDMNLPERFDLSYIGPDGEKHRPVMVHRVVFGSIERFIAILTEH 526

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           F G  P WLSP+Q  +  +     +YA E+  LL++  + +E D RNE I YKIRE  + 
Sbjct: 527 FAGAFPTWLSPVQVKILPLVDKHYDYAYEVKKLLEADDIRVEVDTRNEKIGYKIREAQMD 586

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K P +++ GDKE   R + +R         ++       ++ E
Sbjct: 587 KTPYMLVIGDKELEGRLVSVRSRKDGDLGTITPEQFAEKISNE 629


>gi|254362299|ref|ZP_04978411.1| threonine--tRNA ligase [Mannheimia haemolytica PHL213]
 gi|153093879|gb|EDN74807.1| threonine--tRNA ligase [Mannheimia haemolytica PHL213]
          Length = 643

 Score =  676 bits (1744), Expect = 0.0,   Method: Composition-based stats.
 Identities = 294/648 (45%), Positives = 430/648 (66%), Gaps = 16/648 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS ++F    +  +VA+SI   LAK  +A  +NG+  D SD + ++ ++EIIT +
Sbjct: 4   ITLPDGSQRSFDNPVSVMEVAQSIGAGLAKATIAGRVNGERRDASDIISQDSTLEIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHS AH++  +++ ++P+V++AIGP IE+GFYYD D ++  + ++L  +EK+
Sbjct: 64  DEDGLEIIRHSTAHLLGHSIKQLFPDVKMAIGPTIENGFYYDIDLDRSLTQEDLDALEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K+ +S ++AR+ FE + E YK+ IL E+I       LY   E+ D+CR
Sbjct: 124 MLELAKTNYDVVKRPVSWQEARDTFEKRGEPYKMAILDENIERTATPALYHHEEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +      F KL KVAGAYWRGDS   ML RIYGTAW  +++L +YL  LEE+ KR
Sbjct: 184 GPHVPNMRFCHHF-KLQKVAGAYWRGDSKNKMLQRIYGTAWADKKQLAEYLQRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHR++ + +DL+H+ E+  G++FWH  GW IF+ L +++R K+K+ DY+E+  P ++D+ 
Sbjct: 243 DHRRIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW +Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWQNYADLMFT------TQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+ +E +    ++  IY  FGF  I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIESEVISCIKMVYDIYSTFGFTNI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPE R+G DA+WD AE  +   L        + +   +  GEGAFYGPK E+ L
Sbjct: 417 AVKLSTRPENRIGDDAMWDRAEKGLANAL------RNNGLEYEIQEGEGAFYGPKIEFAL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D +GR+WQCGT+Q+DF LP R  A YV   + +  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 RDCLGREWQCGTVQLDFALPGRLAASYVAEDNGRRTPVMIHRAILGSIERFIGIITEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P QA+V  IT S  +Y Q++   L    + ++ D RNE + +K+REH+++++
Sbjct: 531 GFFPTWLAPTQAVVMNITDSQADYVQQVVKQLSDAGIRVKADLRNEKVGFKVREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           P +++CGDKE +E  + +R           + D + IL  +    + +
Sbjct: 591 PYMLVCGDKEIAEGKVSVRTRKGADLGTYLVSDLVEILKNQIKARELK 638


>gi|251789558|ref|YP_003004279.1| threonyl-tRNA synthetase [Dickeya zeae Ech1591]
 gi|247538179|gb|ACT06800.1| threonyl-tRNA synthetase [Dickeya zeae Ech1591]
          Length = 642

 Score =  676 bits (1744), Expect = 0.0,   Method: Composition-based stats.
 Identities = 292/647 (45%), Positives = 435/647 (67%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDG+ +++    +  DVA  I   LAK  +A  +NG++ D  D +  +  +
Sbjct: 1   MPV---ITLPDGNQRHYDHAVSPLDVALDIGPGLAKACIAGRVNGELVDAVDVIESDAQL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   + +IRHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D ++  + ++L
Sbjct: 58  SIITAKDEEGMEIIRHSCAHLLGHAIKQLWPDTKMAIGPVIDNGFYYDVDLDRTLTQEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M E+ ++D   +K+ +S ++AR+ F ++ E+YKV IL E+I   +   LY   E
Sbjct: 118 ELLEKRMHELASKDYDVVKKKVSWQEARDTFTARGESYKVAILDENISRDDRPGLYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KL K +GAYWRGDS   ML RIYGTAW  +++L+ YL  L
Sbjct: 178 YIDMCRGPHVPNMRFCHHF-KLQKTSGAYWRGDSKNKMLQRIYGTAWADKKQLSAYLQRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF+ L +++R K+K+  Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEAFVRMKLKEYQYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW+++GHW++Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 297 FMMDRVLWEKTGHWENYKEAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+ +E      ++  +Y  
Sbjct: 351 LPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQVRDEVNNCIKMVYDMYST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI+VKLSTRPEKR+GSD  WD AE  +   L      +++ +      GEGAFYGP
Sbjct: 411 FGFEKIVVKLSTRPEKRIGSDETWDRAEEDLAAAL------TENGLPFEYQPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF+LP R +A YV  ++E+  PVMIHRA+ GS+ERFIGI
Sbjct: 465 KIEFTLHDCLDRAWQCGTVQLDFSLPGRLSASYVGENNERQVPVMIHRAILGSMERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E F G  P WL+P+QA+V  IT S  +Y  E+   L+   + ++ D RNE I +KIRE
Sbjct: 525 LTEEFAGFFPTWLAPVQAVVMNITDSQSDYVSELTRKLQDAGIRVKADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H+++++P +++CGDKE     + +R         +++ + I  L +E
Sbjct: 585 HTLRRVPYMLVCGDKEVEAGKVAVRTRRGKDLGSMNVSEVITKLQEE 631


>gi|89073900|ref|ZP_01160406.1| threonyl-tRNA synthetase [Photobacterium sp. SKA34]
 gi|89050228|gb|EAR55732.1| threonyl-tRNA synthetase [Photobacterium sp. SKA34]
          Length = 631

 Score =  676 bits (1744), Expect = 0.0,   Method: Composition-based stats.
 Identities = 301/647 (46%), Positives = 430/647 (66%), Gaps = 20/647 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS + F    +  DVA SI   LAK  +A  ++G   D  D +  + S+
Sbjct: 1   MPV---ITLPDGSQRQFDAPVSTMDVALSIGPGLAKATIAGRVDGVRVDACDLIESDASL 57

Query: 60  EIITPEDP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           EIIT +D    L ++RHSCAH++  A++ ++P+ ++AIGP I++GFYYD D EQ  + ++
Sbjct: 58  EIITAKDEVDGLEIVRHSCAHLLGHAIKQLYPDAKMAIGPTIDNGFYYDIDLEQSLTQED 117

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQG 177
           L  IEK+M E+       +K+ +S ++AR+ F+++ E YK+EIL E++   +   LY   
Sbjct: 118 LEVIEKRMIELAKTKYQVVKKKVSWQEARDAFDARGETYKIEILDENVARDDRPGLYHHE 177

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           E+ D+CRGPHV   G  + F KL+ VAGAYWRG+S+  ML RIYGTA++ ++ L  +L  
Sbjct: 178 EYIDMCRGPHVPHMGFCQNF-KLLSVAGAYWRGNSDNKMLQRIYGTAFHDKKALKAHLTR 236

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
           LEE+ KRDHRK+ +++DLFH+ ++  G++FWH  GW IF+ L  ++R K+ + DY+E+  
Sbjct: 237 LEEAAKRDHRKIGKQLDLFHMQQEAPGMVFWHHNGWTIFRELEVFIREKLNEYDYQEVKG 296

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P ++D+ LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR
Sbjct: 297 PLMMDRVLWERSGHWDKYADAMFT------TSSENREYAIKPMNCPGHVQIFNQGLKSYR 350

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +LP+R+AEFGS +RNEPSGSLHG+MRVRGFTQDDAH+FCT+ Q+  E      ++   YK
Sbjct: 351 DLPLRMAEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTEAQVQQEVTSCIEMVYDTYK 410

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
            FGF+ I+VKLSTRPEKRVGSDA+WD AE+ +   L++++      I   +  GEGAFYG
Sbjct: 411 TFGFDNIVVKLSTRPEKRVGSDAMWDKAESDLITALESME------IPFEIQEGEGAFYG 464

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK E+ L D + R WQCGT+Q+DF LP R  A YV   +E+  PVMIHRA+ GS+ERFIG
Sbjct: 465 PKIEFTLHDCLDRAWQCGTVQLDFALPERLGATYVGEDNERHTPVMIHRAILGSLERFIG 524

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           I+IE++ G  P WL+P QA+V  IT +  EY QEI   LK   + +  D RNE I +KIR
Sbjct: 525 ILIEDYAGFFPTWLAPQQAVVMNITDAQSEYVQEIVEKLKKCGIRVNADLRNEKIGFKIR 584

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           EH++K++P +++CGDKE     + +R        K  + + +  + +
Sbjct: 585 EHTLKRVPFMLVCGDKEVEAGVVAVRTRKGKDLGKFKIDELVAFMQE 631


>gi|169634342|ref|YP_001708078.1| threonyl-tRNA synthetase [Acinetobacter baumannii SDF]
 gi|238688108|sp|B0VKJ4|SYT_ACIBS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|169153134|emb|CAP02213.1| threonyl-tRNA synthetase [Acinetobacter baumannii]
          Length = 640

 Score =  676 bits (1744), Expect = 0.0,   Method: Composition-based stats.
 Identities = 302/638 (47%), Positives = 431/638 (67%), Gaps = 15/638 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T P+G  K+F    +  +VA+SI   LAK  VA  +N ++ D  D +  + +++IITP+
Sbjct: 4   ITLPNGDQKSFDHPVSVMEVAQSIGPGLAKNTVAGRVNDRLVDACDLITEDSTLQIITPK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  AV+ ++PE ++ IGP+IE+GFYYD     PF+ D++A IE++
Sbjct: 64  DEEGLEIIRHSCAHLVGHAVKQLFPEAKMVIGPVIEEGFYYDIWMPCPFTLDDMAAIEER 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+++I +D   +K+    ++  ++F  + E YK+ ++E +P ++ + LY   E+ D+CRG
Sbjct: 124 MKKLIDQDYDVIKKMTPRDEVIKVFTDRGEEYKLRLVEDMPEEKAMGLYYHQEYVDMCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +T  +K F KL K++GAYWRGD+    L RIYGTAW  +++L  Y+  +EE+E RD
Sbjct: 184 PHVPNTKFLKSF-KLTKISGAYWRGDAKNEQLQRIYGTAWADKKQLAAYIKRIEEAENRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHL 304
           HRK+ + +DLFH+ E+  G++FWH  GW I+Q L  YMR+ +  + Y+EI TPQ++D  L
Sbjct: 243 HRKIGKALDLFHMQEEAPGMVFWHANGWTIYQVLEQYMRKVQQDNGYQEIKTPQIVDFTL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGH  +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYR+LP+RLAE
Sbjct: 303 WEKSGHAANYAENMFT------THSESRNYAVKPMNCPCHVQVFNQGLKSYRDLPIRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNEPSGSLHG+MRVRGFTQDDAH+FCTKEQ+  E      L + +YKDFGFE++ 
Sbjct: 357 FGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTKEQIGKEVADFIKLTLDVYKDFGFEEVQ 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +KLSTRPEKRVG DALWD AE  +   LD         +   +  GEGAFYGPK E+ LK
Sbjct: 417 MKLSTRPEKRVGDDALWDLAEKSLADALDAAG------LEWELQPGEGAFYGPKIEFSLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D +GR WQCGTIQ DFNLP R +A YV   +E+  PVM+HRA+ GS ERFIGI+IE++ G
Sbjct: 471 DCLGRVWQCGTIQCDFNLPVRLDASYVTEENERDQPVMLHRAILGSFERFIGILIEHYAG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
            +P WLSP+QA V  IT S  E ++++   LK + L   +D RNE I +KIRE ++++IP
Sbjct: 531 FMPPWLSPVQACVMNITDSQAEASEQVVAKLKENGLRAISDLRNEKIGFKIRERTLERIP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +++ GD+E  E ++ +R         +S+   I ++ 
Sbjct: 591 YLLVLGDREVEEGTVNVRTRSGKNLGTMSVDAFIDLVK 628


>gi|148381087|ref|YP_001255628.1| threonyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
 gi|153932923|ref|YP_001385460.1| threonyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|153935084|ref|YP_001388867.1| threonyl-tRNA synthetase [Clostridium botulinum A str. Hall]
 gi|166223333|sp|A7FY87|SYT_CLOB1 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|166223334|sp|A5I6L8|SYT_CLOBH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|148290571|emb|CAL84700.1| threonyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
 gi|152928967|gb|ABS34467.1| threonyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|152930998|gb|ABS36497.1| threonine--tRNA ligase [Clostridium botulinum A str. Hall]
          Length = 635

 Score =  676 bits (1744), Expect = 0.0,   Method: Composition-based stats.
 Identities = 295/643 (45%), Positives = 420/643 (65%), Gaps = 16/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+T  DG +  F      SD+A  IS +L KKA+A  I+G+  DL   + ++ S+EI+
Sbjct: 1   MIKITLKDGKVMEFEEGIKISDIAMKISPALYKKALAAKIDGETVDLMTELHKDSSLEIL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T ED      +RH+ +H++A+AV+ ++PEV++AIGP I+ GFYYDF+ +  F+ + L +I
Sbjct: 61  TFEDEMGKWALRHTGSHMLAQAVKRLYPEVKLAIGPAIDTGFYYDFEADFTFTPEMLEKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E ++++II  +    +  L  E+A +L + K E YKVE++E +P  E ++ Y+QG++ DL
Sbjct: 121 EAEIKKIIKENHKLERFELPREEAIKLMKEKNEDYKVELIEDLPEGEVISFYKQGDFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPHV STG+VK   KL+ +AGAYWRGD N  ML RIYGTA+  + EL +YL  +EE++
Sbjct: 181 CAGPHVPSTGKVKSV-KLLSLAGAYWRGDENNKMLQRIYGTAFTKKSELDEYLNMIEEAK 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLD 301
           KRDHRKL +E+DLF I E+G G  F+H KG  +   L S+ R +  K  Y+EI TP +L+
Sbjct: 240 KRDHRKLGKELDLFSIHEEGPGFPFFHPKGMIVRNILESFWREEHTKAGYQEIRTPLILN 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW QSGHWD Y+ NM+     DD       +A+KPMNCPG + V+ + + SYR+LP+R
Sbjct: 300 EALWHQSGHWDHYKENMYFTNIDDD------DYAIKPMNCPGGILVYKNSMHSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           L+E G V+R+E SG+LHGLMRVR FTQDDAH++ TKEQ+  E + I  LI   YK FGFE
Sbjct: 354 LSELGIVHRHELSGALHGLMRVRCFTQDDAHLYMTKEQIKEEVVGIIKLIDKFYKLFGFE 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPE  +GSD  W+ A N ++  LD+I           V  G+GAFYGPK ++
Sbjct: 414 YF-VELSTRPEDSMGSDEDWEIATNGLREALDSIGK------EYRVNEGDGAFYGPKIDF 466

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            LKD IGR WQCGTIQ+DF +P RF+  Y+ +  EK  PVM+HR ++GS+ERFIGI+IE 
Sbjct: 467 HLKDCIGRTWQCGTIQLDFQMPERFDLSYIGADGEKHRPVMVHRTIYGSVERFIGILIEQ 526

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  P WL+P+Q  +  IT S  +Y +++   LK +++ +E D RNE I YKIRE  ++
Sbjct: 527 YAGAFPTWLAPVQVKLMNITDSQYDYLKKVEEALKENNIRVEIDTRNEKIGYKIREAQLQ 586

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K+P ++I GDKE     + +R         +SL + I  +  E
Sbjct: 587 KVPYMLILGDKEVEAGKVAVRSRKDGDLGAISLEEFIEKIKNE 629


>gi|300856610|ref|YP_003781594.1| threonyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
 gi|300436725|gb|ADK16492.1| threonyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
          Length = 637

 Score =  676 bits (1744), Expect = 0.0,   Method: Composition-based stats.
 Identities = 294/643 (45%), Positives = 416/643 (64%), Gaps = 16/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+   DG           +DVA  +S SL KKA+   INGKV +L+  +  +  +EI+
Sbjct: 1   MIKIVLKDGKELEVEKGLKVADVAAKLSTSLGKKALGAKINGKVEELNKEINEDCKLEIL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T ED     ++RH+ +HI+A+AV+ ++PEV++AIGP I+DGFYYD D +  F+ + L +I
Sbjct: 61  TFEDEDGKKILRHTGSHILAQAVKRLYPEVKLAIGPSIDDGFYYDMDADFSFTPELLEKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M +II  +    +  L+ ++A +L E K E YKV++++ +P  E ++ Y+QG++ DL
Sbjct: 121 EGEMNKIIKENEKLERFELTRDEAVKLMEEKNEPYKVQLIKDLPEDEIISFYKQGDFVDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPHV STG+VK   KL+ +AGAYWRG+    ML RIYGTA+  + +L  YL  +EE++
Sbjct: 181 CAGPHVPSTGKVKVV-KLLSIAGAYWRGNEKNKMLQRIYGTAFEKKNDLKDYLTMMEEAK 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KRDHRKL +E+DLF I E+G G  F+H KG  I   L +Y R+   K  Y+EI TP +L+
Sbjct: 240 KRDHRKLGKELDLFSIHEEGPGFPFFHPKGMIIRNELQNYWRQVHHKAGYDEIMTPIILN 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW QSGHWD Y+ NM+  K       D   +A+KPMNCPG + V+ + + SYR+LP+R
Sbjct: 300 EELWHQSGHWDHYKENMYFTKI------DDEDYAIKPMNCPGSILVYKNKIHSYRDLPIR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
             E G V+R+E SG+LHGLMRVR FTQDDAH+F TK+ M +E + +  LI S YK F FE
Sbjct: 354 YGEMGIVHRHEKSGALHGLMRVRCFTQDDAHIFMTKDNMKDEIVNVIKLIDSFYKVFKFE 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPE  +GSD  W+ A   +K  L  +       ++  V  G+GAFYGPK ++
Sbjct: 414 YF-VELSTRPEDSMGSDEDWEAATEGLKDALKAVG------LDYKVNEGDGAFYGPKIDF 466

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            LKD+IGR WQCGT+Q+DF +P RF+  YV +  EK  PVM+HR VFGSIERFIGI+IEN
Sbjct: 467 HLKDSIGRTWQCGTVQLDFQMPERFDLTYVGADGEKHRPVMVHRVVFGSIERFIGILIEN 526

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  P WL+P+Q  V  IT +  +Y  E+   LK + + +E+D RNE I YKIRE  ++
Sbjct: 527 YAGAFPAWLAPVQVEVMNITDAQDDYVNEVVEKLKENDIRVESDMRNEKIGYKIREAQMQ 586

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K+P +I+ G+KE  +++I +R         ++L D I  L  E
Sbjct: 587 KVPYMIVLGEKEMKDKTISVRSRKGGDMGTMALDDFISKLKDE 629


>gi|237731269|ref|ZP_04561750.1| threonyl-tRNA synthetase [Citrobacter sp. 30_2]
 gi|226906808|gb|EEH92726.1| threonyl-tRNA synthetase [Citrobacter sp. 30_2]
          Length = 642

 Score =  676 bits (1744), Expect = 0.0,   Method: Composition-based stats.
 Identities = 300/655 (45%), Positives = 434/655 (66%), Gaps = 19/655 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS +++    +  DVA  I   LAK  +A  ++G++ D SD +  +  +
Sbjct: 1   MPV---ITLPDGSQRHYDHAVSPMDVALDIGPGLAKATIAGRVDGELVDASDLIEHDAKL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L +IRHSCAH++  A++ +WP  ++AIGP++++GFYYD D ++  + +++
Sbjct: 58  SIITAKDEEGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVVDNGFYYDIDLDRTLTQEDV 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M E+  ++   +K+ +S  +ARE F  + E YKV IL E+I   +   LY   E
Sbjct: 118 DALEKRMHELAEKNYDVIKKKVSWYEARETFVKRGETYKVSILDENIAHDDKPGLYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KLMK AGAYWRGDSN  ML RIYGTAW  ++ L  YL  L
Sbjct: 178 YVDMCRGPHVPNMRFCHHF-KLMKTAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF+ L  ++R K+K+  Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW+++GHWD+Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 297 FMMDRVLWEKTGHWDNYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  
Sbjct: 351 LPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQIRDEVNACIRMVYDMYST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI+VKLSTRPEKR+GSD +WD AE  +   L+      ++ I     LGEGAFYGP
Sbjct: 411 FGFEKIVVKLSTRPEKRIGSDEMWDRAEADLAVALE------ENNIPFEFQLGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF+LPSR +A YV  ++E+  PVMIHRA+ GS+ERFIGI
Sbjct: 465 KIEFTLYDCLDRAWQCGTVQLDFSLPSRLSASYVGENNERQVPVMIHRAILGSMERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E F G  P WL+P+Q +V  IT S  EY  E+   L++  + ++ D RNE I +KIRE
Sbjct: 525 LTEEFAGFFPTWLAPVQVVVMNITDSQSEYVNELTQKLQNAGIRVKADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           H+++++P +++CGDKE     + +R         + + + I  L +E      Q+
Sbjct: 585 HTLRRVPYMLVCGDKEVEAGKVAVRTRRGKDLGSLDVNEVIEKLQQEIRSRSLQQ 639


>gi|294677983|ref|YP_003578598.1| threonyl-tRNA synthetase [Rhodobacter capsulatus SB 1003]
 gi|294476803|gb|ADE86191.1| threonyl-tRNA synthetase [Rhodobacter capsulatus SB 1003]
          Length = 648

 Score =  676 bits (1744), Expect = 0.0,   Method: Composition-based stats.
 Identities = 329/653 (50%), Positives = 440/653 (67%), Gaps = 10/653 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           S I L FPDG+ +++P   T ++VA SIS SLAK A++  ++G   DL  P++ +  I I
Sbjct: 2   SQISLHFPDGAKRDYPAGVTAAEVAASISPSLAKAAISAQLDGAHWDLQWPIKRDARISI 61

Query: 62  ITPEDP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            T +DP  +L +IRH  AHIMA AVQ IWP+V+V IGP+ + G++YDFD+ +PF+ ++L 
Sbjct: 62  NTMKDPVPALELIRHDLAHIMARAVQEIWPDVKVTIGPVRDAGWFYDFDRAEPFTPEDLG 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           QIE +M++II    P   +  S E A   +E   E YKVE++  IP  E++ +Y  G W 
Sbjct: 122 QIEARMKQIINAREPVRTEVWSREDAIAHYEKSNEPYKVELVNRIPEGEDLRMYWHGNWQ 181

Query: 181 DLCRGPHVRSTGQ-VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           DLCRGPH++ TGQ     FKL  VAGAYW GDS RPML RIYG A+ T+ +L  ++  LE
Sbjct: 182 DLCRGPHLQHTGQVPADAFKLTHVAGAYWLGDSTRPMLQRIYGIAFRTRDDLKAHMTMLE 241

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+ KRDHRKL REMDLFH+ E+  G +FWH  GW I+ TL  YMRR +  D Y E+NTPQ
Sbjct: 242 EAAKRDHRKLGREMDLFHMQEEAPGQVFWHPNGWTIYTTLQDYMRRRQRADGYVEVNTPQ 301

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+++ LW+ SGHW++YR NMF V+  ++  ++    ALKPMNCP HV +FN GLKSYR+L
Sbjct: 302 VVNRKLWEASGHWENYRENMFIVEVDEEGAREKVINALKPMNCPCHVQIFNVGLKSYRDL 361

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFGS  R EPSG+LHG+MRVRGFTQDDAH+FC ++Q+  E  K    + ++Y D 
Sbjct: 362 PLRMAEFGSCARYEPSGALHGIMRVRGFTQDDAHIFCMEDQIEAETKKFIEFLSAVYADL 421

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+K  +KLSTRPEKR+G++  WD AE  +   +    +         +  GEGAFYGPK
Sbjct: 422 GFDKWRIKLSTRPEKRIGTEESWDHAEAALANAVTAAGH------EYEIFEGEGAFYGPK 475

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E++L DAIGRDWQCGT+QVD NLP R +A Y+     K  PVM+HRA  GS ERFIGI+
Sbjct: 476 LEFVLTDAIGRDWQCGTLQVDPNLPERLDANYIGPDGAKHRPVMLHRACLGSFERFIGIL 535

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+  G LPLWL+P Q +V +ITS A +Y +E+A  L +  +  E D RNE INYK+REH
Sbjct: 536 IESHAGKLPLWLAPRQVVVASITSEADDYVEEVAATLIAAGIRAECDTRNEKINYKVREH 595

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           S+ K+P I   G KE   R++ +RR G T T+ V+L   +  L  E+ PPD +
Sbjct: 596 SLGKVPYIFAIGAKEVETRTVSVRRLGDTRTETVALDAIVAALKAEATPPDLR 648


>gi|226954309|ref|ZP_03824773.1| threonyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
 gi|226834935|gb|EEH67318.1| threonyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
          Length = 640

 Score =  676 bits (1743), Expect = 0.0,   Method: Composition-based stats.
 Identities = 301/638 (47%), Positives = 426/638 (66%), Gaps = 15/638 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T P+G  K F    +  ++A+SI   LAK  VA  IN ++ D  D +  + +++IITP+
Sbjct: 4   ITLPNGDQKQFDQPISVMELAQSIGPGLAKNTVAGRINDRLVDACDLITEDATVQIITPK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  AV+ ++PE ++ IGP+IE+GFYYD    +PF+ D++A IE++
Sbjct: 64  DEEGLEIIRHSCAHLVGHAVKQLFPEAKMVIGPVIEEGFYYDIWMPRPFTLDDMAAIEER 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+++I +D   +K+    E     F ++ E YK+ ++  +P +  + LY   ++ D+CRG
Sbjct: 124 MKKLIDQDYDVIKKMTPREDVIAEFTARGEEYKLRLIADMPEETQMGLYYHQDYLDMCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +T  +K F KL K++GAYWRGD+    L RIYGTAW  +++L  Y+  +EE+EKRD
Sbjct: 184 PHVPNTKFLKSF-KLTKISGAYWRGDAKNEQLQRIYGTAWADKKQLAAYIKRIEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHL 304
           HRK+ + +DLFH+ E+  G++FWH  GW I+Q L  YMR+ +  + Y+EI TPQ++D  L
Sbjct: 243 HRKIGKALDLFHMQEEAPGMVFWHANGWTIYQVLEQYMRKVQQDNGYQEIKTPQIVDFTL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGH  +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYR+LP+RLAE
Sbjct: 303 WEKSGHAANYAENMFT------THSESRNYAVKPMNCPCHVQVFNQGLKSYRDLPIRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNEPSGSLHG+MRVRGFTQDDAH+FCTKEQ+  E      L + +YKDFGFE++ 
Sbjct: 357 FGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTKEQIGQEVADFIKLTLDVYKDFGFEEVQ 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +KLSTRPEKRVG DALWD AE  +   LD         +   +  GEGAFYGPK E+ LK
Sbjct: 417 MKLSTRPEKRVGDDALWDIAEKSLADALDDAG------LAWDLQPGEGAFYGPKIEFSLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D +GR WQCGTIQ DFNLP R +A YV   +E+  PVM+HRA+ GS ERFIGI+IE++ G
Sbjct: 471 DCLGRVWQCGTIQCDFNLPIRLDASYVTEDNERDQPVMLHRAILGSFERFIGILIEHYAG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
            +P WL+PIQA V  IT S  +  +++   LK   L   +D RNE I +KIRE ++++IP
Sbjct: 531 FMPPWLAPIQACVMNITDSQADACEQVVAKLKESGLRAISDLRNEKIGFKIRERTLERIP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +++ GD+E  E ++ +R         +S+   I ++ 
Sbjct: 591 YLLVLGDREVEEGTVNVRTRSGKNLGTMSIDAFIDLVK 628


>gi|253688275|ref|YP_003017465.1| threonyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|259516611|sp|C6DFY6|SYT_PECCP RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|251754853|gb|ACT12929.1| threonyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 642

 Score =  676 bits (1743), Expect = 0.0,   Method: Composition-based stats.
 Identities = 292/647 (45%), Positives = 429/647 (66%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP    +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D SD +  +  +
Sbjct: 1   MPV---ITLPDGSQRHYDHAVSPLDVALDIGPGLAKACIAGRVNGELVDASDKIDTDAQL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L +IRHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D ++  + +++
Sbjct: 58  AIITAKDEAGLEIIRHSCAHLLGHAIKQLWPDTKMAIGPVIDNGFYYDVDIDRTLTQEDI 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M E+   D   +K+ +S ++AR+ F ++ E YK+ IL E+I   +   LY   E
Sbjct: 118 ELLEKRMHELADTDYDVIKKKVSWQEARDAFAARGETYKMAILDENISRDDRPGLYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KL K +GAYWRGDS   ML RIYGTAW  +++L  YL  L
Sbjct: 178 YIDMCRGPHVPNMRFCHHF-KLQKTSGAYWRGDSKNKMLQRIYGTAWADKKQLASYLQRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF+ L +++R K+K   Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEAFVRMKLKSYQYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ +W+++GHW++Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 297 FMMDRVMWEKTGHWENYKEAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  
Sbjct: 351 LPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQVRDEVNSCIKMVYDMYST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI+VKLSTRPEKR+GSD +WD AE  +   L      +++ I      GEGAFYGP
Sbjct: 411 FGFEKIVVKLSTRPEKRIGSDEMWDRAEADLAAAL------TENNIEFDYQPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF+LP R NA YV   +E+  PVMIHRA+ GS+ERFIGI
Sbjct: 465 KIEFTLHDCLDRAWQCGTVQLDFSLPGRLNASYVGESNERQVPVMIHRAILGSMERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E F G  P WL+P+Q ++  IT +  +Y  E+   L+   + ++ D RNE I +KIRE
Sbjct: 525 LTEEFAGFFPTWLAPVQVVIMNITDTQSDYVNELTRKLQEAGIRVKADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H+++++P +++CGDKE     + +R         + + + I  L +E
Sbjct: 585 HTLRRVPYMLVCGDKEVEAGKVAVRTRRGKDLGSLDVSEVISKLQQE 631


>gi|123442189|ref|YP_001006170.1| threonyl-tRNA synthetase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|166225517|sp|A1JMJ9|SYT_YERE8 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|122089150|emb|CAL11992.1| threonyl-tRNA synthetase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 642

 Score =  676 bits (1743), Expect = 0.0,   Method: Composition-based stats.
 Identities = 291/647 (44%), Positives = 430/647 (66%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS + +    +  DVA  I   LAK  +A  +NG++ D SD +  +  +
Sbjct: 1   MPV---ITLPDGSQRQYDHAVSVLDVALDIGPGLAKACIAGRVNGELVDASDLIESDAQL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L ++RHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D  +  + ++L
Sbjct: 58  AIITAKDAEGLEILRHSCAHLLGHAIKQLWPDTKMAIGPVIDNGFYYDVDINRTLTQEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M E+  +D   +K+ +S ++AR+ F ++ E YKV IL E+I   ++  LY   E
Sbjct: 118 DLLEKRMHELADKDYDVIKKKVSWQEARDTFAARGEDYKVAILDENISRDDHPGLYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KL K +GAYWRGDS   ML RIYGTAW+ +++L  YL  L
Sbjct: 178 YVDMCRGPHVPNMRFCHHF-KLQKTSGAYWRGDSKNKMLQRIYGTAWSDKKQLNAYLQRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF+ L +++R K+K+  Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELETFVRMKLKEYQYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW+++GHW++Y  +MF       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 297 FMMDRVLWEKTGHWENYAEHMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  
Sbjct: 351 LPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQVRDEVNSCIKMVYDMYST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI+VKLSTRPEKR+GSD LW  AE+ +   L      +++ I      GEGAFYGP
Sbjct: 411 FGFEKIVVKLSTRPEKRIGSDDLWTRAEDDLAAAL------TENGIPFDYQPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF+LP R +A Y+  ++++  PVMIHRA+ GS+ERFIGI
Sbjct: 465 KIEFTLHDCLDRAWQCGTVQLDFSLPGRLSASYIGENNDRQVPVMIHRAILGSMERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E + G  P WL+P+Q +V  IT S  +Y Q++   L+   +  + D RNE I +KIRE
Sbjct: 525 LTEEYAGFFPTWLAPVQVVVMNITDSQSDYVQQVTKKLQDAGIRAKADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H+++++P +++CGDKE     I +R         + +   +  L  E
Sbjct: 585 HTLRRVPYMLVCGDKEVESGKIAVRTRRGKDLGSLDVNVVVDQLLAE 631


>gi|88810665|ref|ZP_01125922.1| threonyl-tRNA synthetase [Nitrococcus mobilis Nb-231]
 gi|88792295|gb|EAR23405.1| threonyl-tRNA synthetase [Nitrococcus mobilis Nb-231]
          Length = 641

 Score =  676 bits (1743), Expect = 0.0,   Method: Composition-based stats.
 Identities = 306/646 (47%), Positives = 425/646 (65%), Gaps = 18/646 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP    +T PDGS + +    T   VAE I   LAK AVA  ++G+V DL   +  +G++
Sbjct: 1   MP---TVTLPDGSERRYDRPVTLRQVAEDIGPGLAKAAVAGRLDGRVLDLDHLIQEDGAV 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            I+T  D   L ++RHS AH++A+AV+ ++P+ QV IGP+IE+GFYYDF  ++ FS  +L
Sbjct: 58  SIVTSRDAEGLEILRHSTAHLLAQAVKQLYPDAQVTIGPVIENGFYYDFAYQRAFSEQDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IE +M+E+   D    ++     +A   F    E YK  I+E IP  E V+LYRQG++
Sbjct: 118 RAIEVRMEELARADIEVQREVWDRSEAMAFFRGIGEEYKARIIEEIPPAEVVSLYRQGDF 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV  TG +K F KL KVAGAYWRGD+   ML RIYGTAW  ++ L  YL+ LE
Sbjct: 178 IDLCRGPHVPRTGMLKAF-KLTKVAGAYWRGDARNEMLQRIYGTAWPDRKALQHYLHALE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+++RDHR+LA+  DLFH+ E+  G++FWH  GW+++  L  Y+R K+    Y E+ TP+
Sbjct: 237 EAQRRDHRRLAKIQDLFHLQEEAPGMVFWHPNGWRVYLLLQDYLRAKLDAHGYREVRTPE 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D+ LW++SGHW  +RA+MF       T  + R +A+KPMNCP HV +FN GLKSYR+L
Sbjct: 297 LVDRSLWERSGHWQKFRADMFT------TESEKRDYAVKPMNCPCHVQIFNQGLKSYRDL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFG+ +RNE SG+LHGLMRVR F QDDAH+FCT+EQ+ +E     +L  ++Y+DF
Sbjct: 351 PLRLAEFGNCHRNEASGTLHGLMRVRNFVQDDAHIFCTEEQIQSEVAGFLDLAEAVYRDF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF++++V LSTRPE+RVG+DALWD AE  +   L         R++  V  GEGAFYGPK
Sbjct: 411 GFDEVIVALSTRPEQRVGADALWDKAEQALDQALRA------RRLDWEVKPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E  +KD++GR WQCGT+QVDF++P R  A YV     +  PVM+HRA+FGS ERFIG++
Sbjct: 465 IELSMKDSLGRVWQCGTMQVDFSMPQRLGAQYVAEDGARLVPVMLHRAIFGSFERFIGVL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE++ G  P+WL+PIQA+V  IT     YA  I   L  H      D RNE I +KIREH
Sbjct: 525 IEHYGGAWPVWLAPIQAVVLNITDRQGAYASGIEKRLAEHGFRAYGDLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +++K+P ++I G++E    ++ +R         + L   I  L+ E
Sbjct: 585 TLQKVPYLLIVGERERESMTVAVRTREGEDLGSMPLKAFIERLSGE 630


>gi|318605898|emb|CBY27396.1| threonyl-tRNA synthetase [Yersinia enterocolitica subsp.
           palearctica Y11]
          Length = 642

 Score =  676 bits (1743), Expect = 0.0,   Method: Composition-based stats.
 Identities = 290/647 (44%), Positives = 431/647 (66%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS + +    +  DVA  I   LAK  +A  +NG++ D SD +  +  +
Sbjct: 1   MPV---ITLPDGSQRQYDHAVSVLDVALDIGPGLAKACIAGRVNGELVDASDLIESDAQL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L ++RHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D ++  + ++L
Sbjct: 58  AIITAKDAEGLEILRHSCAHLLGHAIKQLWPDTKMAIGPVIDNGFYYDVDIDRTLTQEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M E+  +D   +K+ +S ++AR+ F ++ E YKV IL E+I   ++  LY   E
Sbjct: 118 DLLEKRMHELADKDYDVIKKKVSWQEARDTFAARGEDYKVAILDENISRDDHPGLYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KL K +GAYWRGDS   ML RIYGTAW+ +++L  YL  L
Sbjct: 178 YVDMCRGPHVPNMRFCHHF-KLQKTSGAYWRGDSKNKMLQRIYGTAWSDKKQLNAYLQRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KR+HRK+ +++DL+H+ E+  G++FWH  GW IF+ L +++R K+K+  Y+E+  P
Sbjct: 237 EEAAKRNHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELETFVRMKLKEYQYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW+++GHW++Y  +MF       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 297 FMMDRVLWEKTGHWENYAEHMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  
Sbjct: 351 LPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQVRDEVNSCIKMVYDMYST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI+VKLSTRPEKR+GSD LW  AE+ +   L      +++ I      GEGAFYGP
Sbjct: 411 FGFEKIVVKLSTRPEKRIGSDDLWTRAEDDLAAAL------TENGIPFDYQPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF+LP R +A Y+  ++++  PVMIHRA+ GS+ERFIGI
Sbjct: 465 KIEFTLHDCLDRAWQCGTVQLDFSLPGRLSASYIGENNDRQVPVMIHRAILGSMERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E + G  P WL+P+Q +V  IT S  +Y Q++   L+   +  + D RNE I +KIRE
Sbjct: 525 LTEEYAGFFPTWLAPVQVVVMNITDSQSDYVQQVTKKLQDAGIRAKADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H+++++P +++CGDKE     I +R         + +   +  L  E
Sbjct: 585 HTLRRVPYMLVCGDKEVESGKIAVRTRRGKDLGSLDVNVVVDQLLAE 631


>gi|317047868|ref|YP_004115516.1| threonyl-tRNA synthetase [Pantoea sp. At-9b]
 gi|316949485|gb|ADU68960.1| threonyl-tRNA synthetase [Pantoea sp. At-9b]
          Length = 642

 Score =  676 bits (1743), Expect = 0.0,   Method: Composition-based stats.
 Identities = 290/647 (44%), Positives = 433/647 (66%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
           MP    +T PDGS ++F    +  D+A  I   LAK  +A  +NG++ D  D + + + +
Sbjct: 1   MPV---ITLPDGSQRSFDRPVSVMDIALDIGPGLAKACIAGRVNGELVDAVDLIHDDAQV 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L +IRHSCAH++  A++ +WP  ++AIGP+I++GFYYD D +   + +++
Sbjct: 58  AIITAKDEAGLEIIRHSCAHLLGHAIKQLWPNTKMAIGPVIDNGFYYDVDLDHTLTQEDI 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
            Q+EK+M ++   +   +K+ +S ++AR++F ++ E+YK  IL E+I   +   LY   E
Sbjct: 118 EQLEKRMHQLAETNYDVIKKKVSWQEARDVFAARGESYKTTILDENISHDDRPGLYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KL K++GAYWRGDSN  ML RIYGTAW  +++L  YL  L
Sbjct: 178 YIDMCRGPHVPNMRFCHHF-KLQKISGAYWRGDSNNKMLQRIYGTAWADKKQLAAYLQRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF+ L  ++R K+K+  Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW+++GHW++Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 297 FMMDRVLWEKTGHWENYKEAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+ +E      ++  +Y  
Sbjct: 351 LPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQVRDEVNSCIRMVYDMYST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI+VKLSTRPEKR+G+D +WD AE  +   L       +++I      GEGAFYGP
Sbjct: 411 FGFEKIVVKLSTRPEKRIGTDEMWDRAEVDLAEALK------ENQIPFEYQPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF+LP R +A YV  ++++  PVMIHRA+ GS+ERFIGI
Sbjct: 465 KIEFTLHDCLDRAWQCGTVQLDFSLPKRLDATYVGENNDRQTPVMIHRAILGSMERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E F G  P WL+P+QA+V  IT S  EY  E+   L++  + ++ D RNE I +KIRE
Sbjct: 525 LTEEFAGFFPSWLAPVQAVVMNITDSQAEYVSELTKKLQNAGIRVKADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H+++++P +++CG+KE     + +R         + +   +  L +E
Sbjct: 585 HTLRRVPYMLVCGEKEVEAGKVAVRTRRGKDLGSMDVDVFVEKLQQE 631


>gi|119774900|ref|YP_927640.1| threonyl-tRNA synthetase [Shewanella amazonensis SB2B]
 gi|166225496|sp|A1S6G4|SYT_SHEAM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|119767400|gb|ABL99970.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Shewanella
           amazonensis SB2B]
          Length = 642

 Score =  676 bits (1743), Expect = 0.0,   Method: Composition-based stats.
 Identities = 298/647 (46%), Positives = 423/647 (65%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP    +T PDGS + F    +  DVA  I   LAK  +A  +NG++ D  D +  + S+
Sbjct: 1   MPV---ITLPDGSQRVFANPVSTMDVAADIGPGLAKACIAGRVNGELKDACDLIHEDASL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT  D   L ++RHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D E   ++D++
Sbjct: 58  SIITARDEEGLEILRHSCAHLLGHAIKQLWPQTKMAIGPVIDNGFYYDVDLEHKLTADDI 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
           A +EK+M E+   D   +K+ +S ++AR+ FE + E+YK+ IL E+I       LY   E
Sbjct: 118 AALEKRMLELAKTDYDVVKRVVSWQEARDTFEGRGESYKMAILDENIAKDATPALYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KLM VAGAYWRGDSN  ML RIYGTAW  ++ L  +L  L
Sbjct: 178 YTDMCRGPHVPNMRFCHHF-KLMSVAGAYWRGDSNNKMLQRIYGTAWGDKKALNTHLARL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF+ L +++R K+ + DY+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWSIFRELETFIRHKLSEYDYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+
Sbjct: 297 FMMDRVLWERSGHWDKYADAMFT------TASENREYAIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFG  +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+  E      ++   Y  
Sbjct: 351 LPLRMAEFGCCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQVQEEVSACIRMVYDTYST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFE I+VKLSTRPEKR+G D +WD AE+ +   L+       + I   +L GEGAFYGP
Sbjct: 411 FGFENIVVKLSTRPEKRIGDDDMWDRAESALIEALNA------NGIAFEILPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+D+ LP R  A YV   + +  PVMIHRA+ GS+ERFIGI
Sbjct: 465 KIEFTLHDCLDRAWQCGTVQLDYALPGRLGATYVAEDNARQTPVMIHRAILGSLERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE + G  P WL+P+QA+V  IT    +Y +E+    K   +    D RNE I +KIRE
Sbjct: 525 LIEEYAGRFPAWLAPVQAVVMNITDKQADYVEELVKFFKEQGIRASQDLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H+++++P +++ GD+E   R I +R        K+S+   +  + ++
Sbjct: 585 HTLRRVPYLLVVGDQEMENREIAVRTRDGKDLGKMSIDAFVASVKEQ 631


>gi|24373852|ref|NP_717895.1| threonyl-tRNA synthetase [Shewanella oneidensis MR-1]
 gi|73919825|sp|Q8EER9|SYT_SHEON RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|24348259|gb|AAN55339.1|AE015671_6 threonyl-tRNA synthetase [Shewanella oneidensis MR-1]
          Length = 642

 Score =  676 bits (1743), Expect = 0.0,   Method: Composition-based stats.
 Identities = 289/647 (44%), Positives = 418/647 (64%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS + F    +  DVA  I   LAK  +A  +NG++ D  D +  +  +
Sbjct: 1   MPV---ITLPDGSKREFAHPVSTLDVAADIGPGLAKACIAGRVNGELKDACDLIETDAEL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   + ++RHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D E   + D++
Sbjct: 58  SIITAKDEEGIEILRHSCAHLLGHAIKQLWPQTKMAIGPVIDNGFYYDIDLEHKLTQDDI 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M E+   +   +K+ +S ++AR+ F ++ E YK+ IL E+I       LY   E
Sbjct: 118 EALEKRMLELAKTNYDVVKRVVSWQEARDTFAARGEEYKIAILDENISKDATPALYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +    + F KLM +AGAYWRG+S   ML RIYGTAW  ++ L+ YL  L
Sbjct: 178 YTDMCRGPHVPNMRFCQHF-KLMSIAGAYWRGNSENKMLQRIYGTAWADKKALSTYLARL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF  L  ++RRK+ +  Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWSIFLELERFIRRKLNQYTYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+
Sbjct: 297 LMMDRVLWERSGHWDKYSEAMFT------TSSENREYAIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFG  +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+  E      ++   Y  
Sbjct: 351 LPLRMAEFGCCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQVQAEVSSCIQMVYDTYST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFE I+VKLSTRPEKR+G DA+WD AE  +K  L        + I   +L GEGAFYGP
Sbjct: 411 FGFENIVVKLSTRPEKRIGDDAMWDRAEEALKQALRA------NNIEFTILPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+D+ LPSR  A YV   + +  PVMIHRA+ GS+ERF+GI
Sbjct: 465 KIEFTLHDCLDRAWQCGTVQLDYALPSRLGATYVAEDNSRQTPVMIHRAILGSLERFLGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE + G  P WL+P+Q +V  IT    +Y +E+    K   +    D RNE I +KIRE
Sbjct: 525 LIEEYAGRFPTWLAPMQVVVMNITDKQADYVEEVVKFFKEQGIRASFDLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H+++++P +++ GD+E   + + +R        K+ + D    + ++
Sbjct: 585 HTLRRVPYLLVVGDQEMENKEVAVRTRDGVDLGKMRIEDFAAKIHQQ 631


>gi|332141016|ref|YP_004426754.1| threonyl-tRNA synthetase [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|238693239|sp|B4RSL8|SYT_ALTMD RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|327551038|gb|AEA97756.1| threonyl-tRNA synthetase [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 638

 Score =  676 bits (1743), Expect = 0.0,   Method: Composition-based stats.
 Identities = 300/647 (46%), Positives = 422/647 (65%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS + F    +  DVA  I   LAK  +A  +NG++ D  D +  +  +
Sbjct: 1   MPV---ITLPDGSQRAFDNPVSVLDVANDIGPGLAKATIAGKVNGELVDAVDMIDADAQL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           +IIT +D   L ++RHSCAH++  A++ +WP  ++AIGP+I++GFYYD D E+  + ++L
Sbjct: 58  QIITAKDEEGLEILRHSCAHLLGHAIKQLWPNTKMAIGPVIDNGFYYDVDMEESLTQEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
           A++EK+M E+   +   +K  +S ++AR+ FE++ E+YK+EIL E+I   +   LY+  E
Sbjct: 118 AKLEKRMLELAKTNYNVVKNKVSWQEARDAFEARGESYKMEILDENISKDDRPALYQHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KLMKVAGAYWRGDS+  ML RIYGTAW  +++L  YL  L
Sbjct: 178 YTDMCRGPHVPNMKFCHHF-KLMKVAGAYWRGDSDNKMLQRIYGTAWADKKQLKSYLQRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+EKRDHRK+ + ++LFH  E+  G++FWH  GW I+  L S++R+K+++  Y+E+  P
Sbjct: 237 EEAEKRDHRKIGKALNLFHWQEEAPGMVFWHNDGWSIYTELESFVRKKLREYGYDEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW++SGHWD Y  NMF       T  + R +A+KPMNCPGHV +FN GLKSYR+
Sbjct: 297 LMMDRSLWEKSGHWDKYAENMFT------TESEKREYAVKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFG  +RNEPSG+LHGLMRVRGFTQDDAH+FCT+EQ+  E      ++   Y  
Sbjct: 351 LPLRMAEFGCCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQILEEVSGCIKMVYETYAA 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFE I VKLSTRPEKRVG+D +WD      K      +    + I      GEGAFYGP
Sbjct: 411 FGFENIKVKLSTRPEKRVGADEIWD------KSEAALAEALKANDIEFDYQPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF++P R  + YV    E+  PVMIHRA+ GS+ERFIGI
Sbjct: 465 KIEFTLHDCLDRAWQCGTVQLDFSMPGRLGSTYVAEDGERKVPVMIHRAILGSLERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E F G  PLWL+P Q +V  IT    +YA +    L+      ++D RNE I +KIRE
Sbjct: 525 LTEEFAGFFPLWLAPQQVVVMNITDKQADYASDCVKKLQDLGFRAKSDLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H++K+IP +++ GDKE     + +R        K+ L D I +  +E
Sbjct: 585 HTLKRIPYMLVVGDKEMEAGEVAVRSRRGDDLGKMGLEDFIAMAQQE 631


>gi|254466098|ref|ZP_05079509.1| threonyl-tRNA synthetase [Rhodobacterales bacterium Y4I]
 gi|206687006|gb|EDZ47488.1| threonyl-tRNA synthetase [Rhodobacterales bacterium Y4I]
          Length = 648

 Score =  676 bits (1743), Expect = 0.0,   Method: Composition-based stats.
 Identities = 331/652 (50%), Positives = 442/652 (67%), Gaps = 10/652 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           + I LTFPDG+ +++    T + VA SIS SLAKKA++  +N +  DL  P+  + +I I
Sbjct: 2   AQISLTFPDGNARSYDAGVTPAQVAASISTSLAKKAISATVNDQHWDLQWPIESDATIAI 61

Query: 62  ITPEDP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            T +D  ++  +IRH  AH+MA AVQ IWP+ +V IGP+IE+G+YYDFD+ +PF+ ++L 
Sbjct: 62  HTMKDEVQANELIRHDLAHVMARAVQEIWPDTKVTIGPVIENGWYYDFDRAEPFTPEDLG 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEKKM+EII +      +    ++A + +    E YKVE++ESIP  E + +Y  G+W 
Sbjct: 122 AIEKKMKEIINKRDEVRTEVWERDRAIQHYTDNNEPYKVELIESIPGDEPLRMYWHGDWQ 181

Query: 181 DLCRGPHVRSTGQ-VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           DLCRGPH++ TGQ     FKLM +AGAYWRGDS+R ML RIYG A+  +++L  +L+ LE
Sbjct: 182 DLCRGPHLQHTGQLPGDAFKLMSIAGAYWRGDSSRAMLQRIYGVAFTGKEKLKAHLHMLE 241

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQ 298
           E+ KRDHRKL REMDLFH+ E+  G IFWH  GWK++ TL  YMRR+ +   Y E+NTPQ
Sbjct: 242 EAAKRDHRKLGREMDLFHMQEEAPGQIFWHPNGWKVYTTLQDYMRRQQEKGGYVEVNTPQ 301

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW+ SGHW+ Y+ NMF V+  ++  ++    ALKPMNCP HV +FN GLKSYR+L
Sbjct: 302 VVDRRLWEASGHWEKYQENMFIVEVDEEHAREKAVNALKPMNCPCHVQIFNQGLKSYRDL 361

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFGS  R EPSG+LHG+MRVRGFTQDDAH+FC ++Q+  E  K  + +  IYKD 
Sbjct: 362 PLRMAEFGSCNRYEPSGALHGIMRVRGFTQDDAHIFCAEDQIEAETKKFIDFLSEIYKDL 421

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFEK  VK S RPEKR GSD +WD +E  +K   +    +        +  GEGAFYGPK
Sbjct: 422 GFEKFSVKFSDRPEKRSGSDEVWDKSEAALKAATEAAGCA------YDLNPGEGAFYGPK 475

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E++L DAIGRDWQCGT+QVDF LP R +A Y+ +   K  PVM+HRA  GS ERFIGI+
Sbjct: 476 LEFVLTDAIGRDWQCGTLQVDFVLPERLDATYIGADGAKHRPVMLHRATLGSFERFIGIL 535

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE   G LP WL+P Q +V +ITS A  Y QE+   LK   +  E D RNE INYK+REH
Sbjct: 536 IEEHAGKLPFWLAPRQVVVASITSDADAYVQEVVAELKKAGVRAEADIRNEKINYKVREH 595

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDC 650
           S+ K+P+I+  G +E  ER++ +RR G   T+  SL +    L  E+ PPD 
Sbjct: 596 SVGKVPVILAVGHREVEERTVSVRRLGEKETKVESLENVTKALAAEATPPDL 647


>gi|332161611|ref|YP_004298188.1| threonyl-tRNA synthetase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325665841|gb|ADZ42485.1| threonyl-tRNA synthetase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
          Length = 642

 Score =  675 bits (1742), Expect = 0.0,   Method: Composition-based stats.
 Identities = 291/647 (44%), Positives = 431/647 (66%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS + +    +  DVA  I   LAK  +A  +NG++ D SD +  +  +
Sbjct: 1   MPV---ITLPDGSQRQYDHAVSVLDVALDIGPGLAKACIAGRVNGELVDASDLIESDAQL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L ++RHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D ++  + ++L
Sbjct: 58  AIITAKDAEGLEILRHSCAHLLGHAIKQLWPDTKMAIGPVIDNGFYYDVDIDRTLTQEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M E+  +D   +K+ +S ++AR+ F ++ E YKV IL E+I   ++  LY   E
Sbjct: 118 DLLEKRMHELADKDYDVIKKKVSWQEARDTFAARGEDYKVAILDENISRDDHPGLYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KL K +GAYWRGDS   ML RIYGTAW+ +++L  YL  L
Sbjct: 178 YVDMCRGPHVPNMRFCHHF-KLQKTSGAYWRGDSKNKMLQRIYGTAWSDKKQLNAYLQRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF+ L +++R K+K+  Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELETFVRMKLKEYQYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW+++GHW++Y  +MF       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 297 FMMDRVLWEKTGHWENYAEHMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  
Sbjct: 351 LPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQVRDEVNSCIKMVYDMYST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI+VKLSTRPEKR+GSD LW  AE+ +   L      +++ I      GEGAFYGP
Sbjct: 411 FGFEKIVVKLSTRPEKRIGSDDLWTRAEDDLAAAL------TENGIPFDYQPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF+LP R +A Y+  ++++  PVMIHRA+ GS+ERFIGI
Sbjct: 465 KIEFTLHDCLDRAWQCGTVQLDFSLPGRLSASYIGENNDRQVPVMIHRAILGSMERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E + G  P WL+P+Q +V  IT S  +Y Q++   L+   +  + D RNE I +KIRE
Sbjct: 525 LTEEYAGFFPTWLAPVQVVVMNITDSQSDYVQQVTKKLQDAGIRAKADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H+++++P +++CGDKE     I +R         + +   +  L  E
Sbjct: 585 HTLRRVPYMLVCGDKEVESGKIAVRTRRGKDLGSLDVNVVVDQLLAE 631


>gi|110679173|ref|YP_682180.1| threonyl-tRNA synthetase [Roseobacter denitrificans OCh 114]
 gi|123362019|sp|Q168U9|SYT_ROSDO RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|109455289|gb|ABG31494.1| threonyl-tRNA synthetase [Roseobacter denitrificans OCh 114]
          Length = 648

 Score =  675 bits (1742), Expect = 0.0,   Method: Composition-based stats.
 Identities = 323/652 (49%), Positives = 430/652 (65%), Gaps = 10/652 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           + I LTFPDGS + F    T  DVA SIS SL KKA++  + G   DL+ P+  + +I I
Sbjct: 2   AQISLTFPDGSTREFDAGVTAGDVAASISTSLRKKAISATVGGAHYDLAWPIHADATIAI 61

Query: 62  ITPEDPR-SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            T +D   +  ++RH  AHIMA AVQ IWPE +V IGP+I+DG+YYDFD+ + FS ++L 
Sbjct: 62  HTMQDEEQANELVRHDLAHIMARAVQEIWPETKVTIGPVIKDGWYYDFDRAEAFSPEDLG 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEKKM+EII +  P   +     +A   +E+  E YKVE++ +IP  E + +Y  G+W 
Sbjct: 122 LIEKKMKEIINKRDPVRTEVWDRARAIAHYEANDEPYKVELINAIPGDEPLRMYWHGDWQ 181

Query: 181 DLCRGPHVRSTGQ-VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           DLCRGPH++ TGQ     FKLM +AGAYWRGDS+R ML RIYG A+  +++L  +L  LE
Sbjct: 182 DLCRGPHLQHTGQVPGDAFKLMSIAGAYWRGDSDRAMLQRIYGVAFTGKEKLKAHLTMLE 241

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+ KRDHRKL REMDLFH+ E+  G +FWH  GW I+ TL  YMRRK +   Y+E+NTPQ
Sbjct: 242 EAAKRDHRKLGREMDLFHMQEEAPGQVFWHPNGWSIYTTLQDYMRRKQRAAGYQEVNTPQ 301

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW+ SGHWD Y+ +MF V+  +D  ++    ALKPMNCP HV +FN GLKSYR+L
Sbjct: 302 VVDRKLWEASGHWDKYQEHMFIVEVDEDHAREKAVNALKPMNCPCHVQIFNQGLKSYRDL 361

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFGS  R EPSG+LHG+MRVRGFTQDD H FC ++Q+  EC      + S+Y+D 
Sbjct: 362 PLRMAEFGSCNRYEPSGALHGIMRVRGFTQDDGHTFCREDQIEAECAAFITYLSSVYQDL 421

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFEK  +  +TRPEKRVGS+  WD  E  ++  +    +         +  GEGAFYGPK
Sbjct: 422 GFEKFEIMFATRPEKRVGSEESWDHVEAALENAIKATGHP------YTLDEGEGAFYGPK 475

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++ L DAIGR+WQCGT QVD NLP R +A Y+     K  P M+HRA  GS ERFIGI+
Sbjct: 476 LDFKLTDAIGREWQCGTFQVDPNLPERLDATYIGQDGAKHRPYMLHRACLGSFERFIGIL 535

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IEN  G LP WL+P Q +V +I S A +Y  E+   L++  +  E D RNE INYK+REH
Sbjct: 536 IENSAGKLPFWLAPRQVVVASIISDADDYVLEVVEKLQAAGVRAEADVRNEKINYKVREH 595

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDC 650
           S+ K+P+I+  G +E  E+++ +RR G   T   +L      L +E+ PPD 
Sbjct: 596 SVGKVPVILAVGAREVEEKTVTLRRLGEKKTSVETLDAVTQALGREATPPDL 647


>gi|114776996|ref|ZP_01452016.1| threonyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1]
 gi|114552517|gb|EAU54977.1| threonyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1]
          Length = 634

 Score =  675 bits (1742), Expect = 0.0,   Method: Composition-based stats.
 Identities = 300/641 (46%), Positives = 424/641 (66%), Gaps = 15/641 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           + ++ PDGS +     AT  D+A  I   LA+  +A  +NGK  D+S  + +G ++ +IT
Sbjct: 1   MNISLPDGSSRTLNEGATAYDLAADIGAGLARATIAATVNGKQVDVSHQLHDGDTVSLIT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +    L VIRHS +H+MA AVQ ++P  QV IGP+IEDGFYYDF  E+ F+ D+L +IE
Sbjct: 61  EKSDEGLEVIRHSTSHLMAMAVQEVFPGAQVTIGPVIEDGFYYDFAYERAFTPDDLTKIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           +KM+++  +  P  ++    + A   FE   E YK +++  IPA E V+LY+QGEW DLC
Sbjct: 121 EKMRQLSNQKLPITREEWDRDAAIAHFEGIGEIYKAKLIGRIPAGETVSLYKQGEWSDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +TG +K F KLMKV+GAYW G+S+   L RIYGTAW ++ +L  YL  LEE+EK
Sbjct: 181 RGPHVPNTGVLKHF-KLMKVSGAYWEGNSDNEQLCRIYGTAWASKGDLKAYLTRLEEAEK 239

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQ 302
           RDHRKLA+ +DLFH+ E+  G+IFWH KGW ++Q + + +R  ++ + Y+EI TPQ++D+
Sbjct: 240 RDHRKLAKSLDLFHLQEEAPGMIFWHPKGWSVWQQVENEIRGVMRDNGYQEIKTPQMVDR 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD +R  MF       T  + R +A+KPMNCP H+ VFN  L SYR+LP+RL
Sbjct: 300 KLWEKSGHWDKFREEMFT------TSTENRDYAIKPMNCPCHIQVFNQNLHSYRDLPLRL 353

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHGLMR+R F QDDAH+FCT+ Q+ +E     +L   +YK FGF+ 
Sbjct: 354 AEFGSCHRNEPSGTLHGLMRLRNFVQDDAHIFCTEAQIQDEVCNFIDLTYDVYKRFGFDD 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           +++ LS RPEKRVG+D  WD AE  +   LD+        I  G+  GEGAFYGPK E+ 
Sbjct: 414 VIIFLSDRPEKRVGTDEQWDKAEAALHQALDS------KGIEYGLNPGEGAFYGPKIEFS 467

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LKD +GR WQCGTIQVDF++P + +A YV   S +  PVM+HRA+ GS+ERFIGI+IE++
Sbjct: 468 LKDCLGRVWQCGTIQVDFSMPGKLDAEYVAEDSSRQTPVMLHRAILGSMERFIGILIEHY 527

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
           +G  P WL+P+Q +   IT +  +Y  E+   +       E D RNE + YK+R H++ +
Sbjct: 528 EGKFPFWLAPVQVVACNITDAQADYVAEVTKSMHKAGFRAEMDLRNEKVGYKVRAHTLAR 587

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +P I++ GD+E  + +I +R          S+ D I  +  
Sbjct: 588 VPYILVAGDREREDGTISVRDLSGQNLGTFSVDDWIAEMVD 628


>gi|294141074|ref|YP_003557052.1| threonyl-tRNA synthetase [Shewanella violacea DSS12]
 gi|293327543|dbj|BAJ02274.1| threonyl-tRNA synthetase [Shewanella violacea DSS12]
          Length = 642

 Score =  675 bits (1742), Expect = 0.0,   Method: Composition-based stats.
 Identities = 284/647 (43%), Positives = 419/647 (64%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP    +T PDGS + F    +  DVA  I   LAK  +A  +NG++ D  D +  +  +
Sbjct: 1   MPV---ITLPDGSKREFANPVSTLDVAADIGPGLAKACIAGRVNGELKDACDIIDTDSEL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   + ++RHSCAH++  A + +WPE ++AIGP+I++GFYYD D E   + +++
Sbjct: 58  SIITAKDEEGVQILRHSCAHLLGHAFKQLWPEAKMAIGPVIDNGFYYDIDLEHKLTQEDI 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             ++K+M ++   +    K+  S + AR+ FE++ E YK+ IL E+I   +   LY   E
Sbjct: 118 DALQKRMTQLAKTNYKVEKKVGSWQVARDTFEARGETYKMAILDENISQDDQPALYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+C GPHV +    + F KLM VAGAYWRG+S+  ML R+YGTAW  ++ L  +L  L
Sbjct: 178 YVDMCGGPHVPNMRFCQNF-KLMSVAGAYWRGNSDNKMLQRVYGTAWADKKALKVHLNRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW++F  L +++R+K+ +  Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWRLFLELETFIRQKLGQYTYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW++SGHWD Y   MF  K       + R +A+KPMNCPGHV +FN GLKSYR+
Sbjct: 297 LMMDRVLWERSGHWDKYSEAMFTTK------SENREYAIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFG  +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+  E      ++   Y+ 
Sbjct: 351 LPLRMAEFGCCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQVQQEVSACIQMVYDTYET 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF+ I+VKLSTRPE+R+G D +WD AE  +K  L        + I   +L GEGAFYGP
Sbjct: 411 FGFKNIVVKLSTRPEQRIGDDEMWDRAEEALKQALTA------NDIEFEILPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+D+ LP R  A YV   + +  PVMIHRA+ GS+ERF+GI
Sbjct: 465 KIEFTLHDCLDRAWQCGTVQLDYALPGRLGATYVAEDNSRQTPVMIHRAILGSLERFLGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE + G  P WL+P+Q +V  IT     YA E+ NLLK + +    D RNE I +KIRE
Sbjct: 525 LIEEYAGKFPTWLAPMQVVVMNITDKQSNYADEVVNLLKENGIRASKDLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H+++++P +++ GD+E   + + +R        K+ + +    + K+
Sbjct: 585 HTLRRVPYLLVVGDQEMENKEVAVRTRDGVDLGKMRIEEFAAKINKQ 631


>gi|289661762|ref|ZP_06483343.1| threonyl-tRNA synthetase [Xanthomonas campestris pv. vasculorum
           NCPPB702]
          Length = 636

 Score =  675 bits (1742), Expect = 0.0,   Method: Composition-based stats.
 Identities = 292/647 (45%), Positives = 423/647 (65%), Gaps = 17/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP  I +T PDGS + F    +   +A+SI   LAK  +A  ++G++ D SD +  + S+
Sbjct: 1   MP-MINITLPDGSRREFESPVSVMQIAQSIGAGLAKATIAGQVDGQLVDASDVIDHDASL 59

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   + +IRHSCAH++  AV+ ++PEV++ IGP+I +GFYYD   E+PF+ +++
Sbjct: 60  RIITAKDAEGVEIIRHSCAHLVGHAVKQLYPEVKMVIGPVIAEGFYYDIYSERPFTPEDM 119

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-ENVTLYRQGE 178
           A IE++MQE+IA+D   +K+     +  E+F  + E YK+ ++E +      + LY   E
Sbjct: 120 AVIEQRMQELIAQDYDVIKKVTPRAEVIEVFAQRGEEYKLRLIEDMSEDITAMGLYYHQE 179

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +T  +K F KL +++GAYWRGD+    L RIYGTAW  +++L  Y+  +
Sbjct: 180 YVDMCRGPHVPNTRFLKAF-KLTRISGAYWRGDAKNEQLQRIYGTAWADKKQLDAYILRM 238

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE++KRDHR++ R  DLFH+ E+  G++FWH KGW ++Q +  YMR+  +D  Y E+  P
Sbjct: 239 EEADKRDHRRIGRAQDLFHLQEEAPGLVFWHPKGWSLWQVVEQYMRKVYRDSGYGEVRCP 298

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           Q+LD  LWQ+SGHWD+Y+  MF       T  + RT+A+KPMNCPGHV VFN GL SYR+
Sbjct: 299 QILDVSLWQKSGHWDNYQDAMFF------TESEKRTYAVKPMNCPGHVQVFNQGLHSYRD 352

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R  EFG+ +RNEPSG+LHG++RVRGFTQDD HVFC + Q+ +E    H   +++Y  
Sbjct: 353 LPIRYGEFGACHRNEPSGALHGILRVRGFTQDDGHVFCLESQIESEVTAFHQQALAVYTA 412

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF+ I +K++ RPEKR+G DA WD AE  ++  L          +    L GEGAFYGP
Sbjct: 413 FGFDDIQIKIALRPEKRLGDDATWDKAEAALRSAL------GVCGVEWQELPGEGAFYGP 466

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K EY LKDAIGR WQ GT+QVDF +P R  A YV+ +S+K HPVM+HRA+ GS+ERFIGI
Sbjct: 467 KIEYHLKDAIGRTWQLGTMQVDFMMPGRLGAEYVDENSQKKHPVMLHRAIVGSMERFIGI 526

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE+  G  P WL+P+Q +V  IT +  EY   +   L +    +  D RNE I YKIRE
Sbjct: 527 LIEHHAGAFPSWLAPVQVVVVNITDAQAEYVDSVRKTLANQGFRVSADLRNEKIGYKIRE 586

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H+++++P +++ GD+E    ++ +R         +++   I  L  E
Sbjct: 587 HTLQRVPYLLVVGDREKENGAVAVRTRSGEDLGTMTVSAFIERLQAE 633


>gi|322807448|emb|CBZ05022.1| threonyl-tRNA synthetase [Clostridium botulinum H04402 065]
          Length = 635

 Score =  675 bits (1742), Expect = 0.0,   Method: Composition-based stats.
 Identities = 296/643 (46%), Positives = 418/643 (65%), Gaps = 16/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+T  DG +         SD+A  IS +L KKA+A  I+G+  DL   + ++ S+EI+
Sbjct: 1   MIKITLKDGKVMEIEEGIKISDIAMKISPALYKKALAAKIDGETVDLMTELHKDSSLEIL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T ED      +RH+ AHI+A+AV+ ++PEV++AIGP I+ GFYYDF+ +  F+ + L +I
Sbjct: 61  TFEDEMGKWALRHTGAHILAQAVKRLYPEVKLAIGPAIDTGFYYDFEADFTFTPEMLEKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E ++++II  +    +  L  E+A  L + K E YKVE++E +P  E ++ Y+QG++ DL
Sbjct: 121 EAEIKKIIKENHKLERFELPREEAINLMKEKNEDYKVELIEDLPEGEVISFYKQGDFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPHV STG+VK   KL+ +AGAYWRG+ N  ML RIYGTA+  + EL +YL  LEE++
Sbjct: 181 CAGPHVPSTGKVKSV-KLLSLAGAYWRGNENNKMLQRIYGTAFTKKSELDEYLNMLEEAK 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLD 301
           KRDHRKL +E+DLF I E+G G  F+H KG  I   L ++ R +  K  Y+EI TP +L+
Sbjct: 240 KRDHRKLGKELDLFSIHEEGPGFPFFHPKGMIIRNILENFWREEHTKAGYQEIRTPLILN 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW QSGHWD Y+ NM+       T  D   +A+KPMNCPG + V+ + + SYR+LP+R
Sbjct: 300 EELWHQSGHWDHYKENMYF------TNIDDSDYAIKPMNCPGGILVYKNSMHSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           L+E G V+R+E SG+LHGLMRVR FTQDDAH++ TKEQ+  E + I  LI   YK FGFE
Sbjct: 354 LSELGIVHRHELSGALHGLMRVRCFTQDDAHLYMTKEQIKEEIVGIIKLIDKFYKLFGFE 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPE  +GSD  W+ A N ++  LD+I           V  G+GAFYGPK ++
Sbjct: 414 YF-VELSTRPEDSMGSDEDWEIATNGLREALDSIGK------EYRVNEGDGAFYGPKIDF 466

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            LKD IGR WQCGTIQ+DF +P RF+  Y+ +  EK  PVM+HR ++GS+ERFIGI+IE 
Sbjct: 467 HLKDCIGRTWQCGTIQLDFQMPERFDLSYIGADGEKHRPVMVHRTIYGSVERFIGILIEQ 526

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  P WL+P+Q  +  IT S  +Y +++   LK +++ +E D RNE I YKIRE  ++
Sbjct: 527 YAGAFPTWLAPVQVKLMNITDSQYDYLKKVEEALKENNIRVEIDTRNEKIGYKIREAQLQ 586

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K+P ++I GDKE     + +R         +SL + I  +  E
Sbjct: 587 KVPYMLILGDKEVEAGKVAVRSRKDGDLGAISLEEFIEKIKNE 629


>gi|138896280|ref|YP_001126733.1| threonyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
 gi|134267793|gb|ABO67988.1| Threonyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
          Length = 649

 Score =  675 bits (1742), Expect = 0.0,   Method: Composition-based stats.
 Identities = 260/660 (39%), Positives = 416/660 (63%), Gaps = 20/660 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP  I++TFPDG+ K FP   +  D+A SIS  L KKA+A  +NG+  DL  P+  +G +
Sbjct: 1   MPDVIRITFPDGAKKEFPSGTSTEDIAASISPGLKKKAIAGKLNGRFVDLRTPLQEDGEL 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT + P +L ++RHS AH+MA+A++ ++  V++ +GP+IE+GFYYD D E   + D+L
Sbjct: 61  VIITQDMPEALDILRHSTAHLMAQAIKRLYDNVKLGVGPVIENGFYYDIDMEHKLTPDDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IE +M++I+  +   +++ +S ++A  L+E   +  K+E++  IP  E +++Y QGE+
Sbjct: 121 PKIEAEMRKIVKENLDVVRKEVSRDEAIRLYEKIGDHLKLELINDIPEGETISIYEQGEF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRG HV STG++K+F KL+ ++GAYWRGD N  ML RIYGTA+  +++L  YL  LE
Sbjct: 181 FDLCRGVHVPSTGKIKEF-KLLSISGAYWRGDRNNKMLQRIYGTAFFKKEDLDHYLQLLE 239

Query: 240 ESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           E+++RDHRKL +E++LF  ++    G+  W  KG  I + +  Y+  K     Y+ + TP
Sbjct: 240 EAKERDHRKLGKELELFTTSQKVGQGLPLWLPKGATIRRLIERYIVDKEIALGYDHVYTP 299

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    L++ SGHWD Y+ NMF     D+         L+PMNCP H+ ++   L SYRE
Sbjct: 300 VLGSVELYKTSGHWDHYKENMFPPMEMDN-----EELVLRPMNCPHHMMIYKSKLHSYRE 354

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+ +E  ++ NLI+ +YKD
Sbjct: 355 LPIRIAELGTMHRYEMSGALTGLQRVRGMTLNDAHIFVRPDQIKDEFKRVVNLILEVYKD 414

Query: 418 FGFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           FG ++   +LS R  +        D +W+ A+ +++  +D +       ++     GE A
Sbjct: 415 FGLDEYSFRLSYRDPQDKEKYYDDDEMWEKAQRMLREAMDELG------LDYYEAEGEAA 468

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  ++ A+G+D    T+Q+DF LP RF+  Y+    +   PV+IHR V  ++ER
Sbjct: 469 FYGPKLDVQVRTALGKDETLSTVQLDFLLPERFDLTYIGEDGKPHRPVVIHRGVVSTMER 528

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTI-TSSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
           F+  +IE +KG  P WL+P+Q  V  + + + ++YA E+   L+ +   +E D R+E I 
Sbjct: 529 FVAFLIEEYKGAFPTWLAPVQVEVIPVSSEAHLDYAYEVKQALQVNGFRVEVDERDEKIG 588

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           YKIRE  ++KIP +++ GDKEA+ER++ +RR+G   ++ V+L   I +L ++      +K
Sbjct: 589 YKIREAQMQKIPYMLVVGDKEAAERAVNVRRYGEKESETVALDKFIAMLEEDVRQKRVKK 648


>gi|187776940|ref|ZP_02993413.1| hypothetical protein CLOSPO_00484 [Clostridium sporogenes ATCC
           15579]
 gi|187775599|gb|EDU39401.1| hypothetical protein CLOSPO_00484 [Clostridium sporogenes ATCC
           15579]
          Length = 635

 Score =  675 bits (1742), Expect = 0.0,   Method: Composition-based stats.
 Identities = 296/643 (46%), Positives = 420/643 (65%), Gaps = 16/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+T  DG +  F      SD+A  IS +L KKA+A  I+G+  DL   + ++ S+EI+
Sbjct: 1   MIKITLKDGKVMEFEEGIKISDIAMKISPALYKKALAAKIDGETVDLMTELHKDSSLEIL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T ED      +RH+ +H++A+AV+ ++PEV++AIGP I+ GFYYDF+ +  F+ + L +I
Sbjct: 61  TFEDEMGKWALRHTGSHMLAQAVKRLYPEVKLAIGPAIDTGFYYDFEADFTFTPEMLEKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E ++++II  +    +  L  E+A +L + K E YKVE++E +P  E ++ Y+QG++ DL
Sbjct: 121 EAEIKKIIKENHKLERFELPREEAIKLMKEKNEDYKVELIEDLPEGEVISFYKQGDFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPHV STG+VK   KL+ +AGAYWRGD N  ML RIYGTA+  + EL +YL  LEE++
Sbjct: 181 CAGPHVPSTGKVKSV-KLLSLAGAYWRGDENNKMLQRIYGTAFTKKSELDEYLNMLEEAK 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLD 301
           KRDHRKL +E+DLF I E+G G  F+H KG  +   L S+ R +  K  Y+EI TP +L+
Sbjct: 240 KRDHRKLGKELDLFSIHEEGPGFPFFHPKGMIVRNILESFWREEHTKAGYQEIRTPLILN 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW QSGHWD Y+ NM+       T  D   +A+KPMNCPG + V+ + + SYR+LP+R
Sbjct: 300 EALWHQSGHWDHYKENMYF------TNIDDGDYAIKPMNCPGGILVYKNSMHSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           L+E G V+R+E SG+LHGLMRVR FTQDDAH++ TKEQ+  E + I  LI   YK FGFE
Sbjct: 354 LSELGIVHRHELSGALHGLMRVRCFTQDDAHLYMTKEQIKEEVVGIIKLIDKFYKLFGFE 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPE  +GSD  W+ A N ++  LD+I           V  G+GAFYGPK ++
Sbjct: 414 YF-VELSTRPEDSMGSDEDWEIATNGLREALDSIGK------EYRVNEGDGAFYGPKIDF 466

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            LKD IGR WQCGTIQ+DF +P RF+  Y+ +  EK  PVM+HR ++GS+ERFIGI+IE 
Sbjct: 467 HLKDCIGRTWQCGTIQLDFQMPERFDLSYIGADGEKHRPVMVHRTIYGSVERFIGILIEQ 526

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  P WL+P+Q  +  IT S  +Y +++   LK +++ +E D RNE I YKIRE  ++
Sbjct: 527 YAGAFPTWLAPVQVKLMNITDSQYDYLKKVEETLKENNIRVEIDTRNEKIGYKIREAQLQ 586

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K+P ++I GDKE     + +R         +SL + I  +  E
Sbjct: 587 KVPYMLILGDKEVEAGKVAVRSRKDGDLGAISLEEFIEKIKNE 629


>gi|294649364|ref|ZP_06726795.1| threonine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
 gi|292824734|gb|EFF83506.1| threonine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
          Length = 640

 Score =  675 bits (1742), Expect = 0.0,   Method: Composition-based stats.
 Identities = 300/638 (47%), Positives = 426/638 (66%), Gaps = 15/638 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T P+G  K F    +  ++A+SI   LAK  VA  IN ++ D  D +  + +++IIT +
Sbjct: 4   ITLPNGDQKQFDQPISVMELAQSIGPGLAKNTVAGRINDRLVDACDLITEDATVQIITQK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  AV+ ++PE ++ IGP+IE+GFYYD    +PF+ D++A IE++
Sbjct: 64  DEEGLEIIRHSCAHLVGHAVKQLFPEAKMVIGPVIEEGFYYDIWMPRPFTLDDMAAIEER 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+++I +D   +K+    E     F ++ E YK+ ++  +P +  + LY   ++ D+CRG
Sbjct: 124 MKKLIDQDYDVIKKMTPREDVIAEFTARGEEYKLRLIADMPEETQMGLYYHQDYLDMCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +T  +K F KL K++GAYWRGD+    L RIYGTAW  +++L  Y+  +EE+EKRD
Sbjct: 184 PHVPNTKFLKSF-KLTKISGAYWRGDAKNEQLQRIYGTAWADKKQLAAYIKRIEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHL 304
           HRK+ + +DLFH+ E+  G++FWH  GW I+Q L  YMR+ +  + Y+EI TPQ++D  L
Sbjct: 243 HRKIGKALDLFHMQEEAPGMVFWHANGWTIYQVLEQYMRKVQQDNGYQEIKTPQIVDFTL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGH  +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYR+LP+RLAE
Sbjct: 303 WEKSGHAANYAENMFT------THSESRNYAVKPMNCPCHVQVFNQGLKSYRDLPIRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNEPSGSLHG+MRVRGFTQDDAH+FCTKEQ+  E      L + +YKDFGFE++ 
Sbjct: 357 FGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTKEQIGQEVADFIKLTLDVYKDFGFEEVQ 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +KLSTRPEKRVG DALWD AE  +   LD         +   +  GEGAFYGPK E+ LK
Sbjct: 417 MKLSTRPEKRVGDDALWDIAEKSLADALDDAG------LAWDLQPGEGAFYGPKIEFSLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D +GR WQCGTIQ DFNLP R +A YV   +E+  PVM+HRA+ GS ERFIGI+IE++ G
Sbjct: 471 DCLGRVWQCGTIQCDFNLPIRLDASYVTEDNERDQPVMLHRAILGSFERFIGILIEHYAG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
            +P WL+PIQA V  IT S  +  +++   LK + L   +D RNE I +KIRE ++++IP
Sbjct: 531 FMPPWLAPIQACVMNITDSQADACEQVVAKLKENGLRAISDLRNEKIGFKIRERTLERIP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +++ GD+E  E ++ +R         +S+   I ++ 
Sbjct: 591 YLLVLGDREVEEGTVNVRTRSGKNLGTMSIDAFIDLVK 628


>gi|259418221|ref|ZP_05742139.1| threonyl-tRNA synthetase [Silicibacter sp. TrichCH4B]
 gi|259345616|gb|EEW57460.1| threonyl-tRNA synthetase [Silicibacter sp. TrichCH4B]
          Length = 648

 Score =  675 bits (1741), Expect = 0.0,   Method: Composition-based stats.
 Identities = 326/652 (50%), Positives = 444/652 (68%), Gaps = 10/652 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
           + I LTFPDG+ +++    T ++VA  IS SLAKKA++ +++G+  DL  PV ++ +I I
Sbjct: 2   AQISLTFPDGNARSYDAGITPAEVAADISTSLAKKAISASVDGQHWDLQWPVTKDAAIAI 61

Query: 62  ITPEDP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            T +D  ++  +IRH  AHIMA AVQ IWP+ +V IGP+IE+G+YYDFD+ +PF+ ++L 
Sbjct: 62  HTMKDEAQANELIRHDLAHIMARAVQEIWPDTKVTIGPVIENGWYYDFDRAEPFTPEDLG 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEKKM+EII +  P   +     KA + +    E YKVE++++IP  E + +Y  G+W 
Sbjct: 122 TIEKKMKEIINKREPVTTEVWDRAKAVQYYTDNNEPYKVELIDAIPGDEPLRMYWHGDWQ 181

Query: 181 DLCRGPHVRSTGQ-VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           DLCRGPH++ TGQ     FKLM +AGAYWRGDS+R ML RIYG A+  +++L  +L  LE
Sbjct: 182 DLCRGPHLQHTGQVPGDAFKLMSIAGAYWRGDSDRAMLQRIYGVAFTGKEKLKAHLTMLE 241

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+ KRDHRKL REM LFH+ E+  G++FWH  GW+I+ TL  YMRR + K  Y E+NTPQ
Sbjct: 242 EAAKRDHRKLGREMHLFHMQEEAPGMVFWHPNGWRIYTTLQDYMRRMQDKGGYVEVNTPQ 301

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+++ LW+ SGHWD+Y+ NMF V+  +D  ++    ALKPMNCP H+ VFN GLKSYR+L
Sbjct: 302 VVNRKLWEASGHWDNYQENMFIVEVDEDHAREKAVNALKPMNCPCHIQVFNQGLKSYRDL 361

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFGS  R EPSG++HG+MRVRGFTQDD H+FCT+EQ+  E  +  + +  +Y+D 
Sbjct: 362 PLRMAEFGSCNRYEPSGAMHGIMRVRGFTQDDGHIFCTEEQVEAETKEFVSFLAKVYQDL 421

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFEK  VKLSTRPEKRVG++  WD AE                     +  GEGAFYGPK
Sbjct: 422 GFEKWRVKLSTRPEKRVGTEESWDQAEAA------LAAGIQAAGYEYELQEGEGAFYGPK 475

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E++L DAIGRDWQCGT+Q+D NLP R +A Y+    +K  P+M+HRA  GS ERFIGI+
Sbjct: 476 LEFVLTDAIGRDWQCGTLQIDPNLPERLDATYIGQDGDKHRPLMLHRATLGSFERFIGIL 535

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE   G LP WL+P Q +V +ITS A +Y  E+   L++  +  E D RNE INYK+REH
Sbjct: 536 IEEHAGKLPFWLAPRQVVVASITSEADDYVNEVVATLRAAGVRAEADIRNEKINYKVREH 595

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDC 650
           S+ K+P+I+  G +E  ER++ +RR G   T+  SL +    L K + PPD 
Sbjct: 596 SVGKVPVILAVGHREVEERTVSVRRLGEKQTKVESLTNVTEELAKAATPPDL 647


>gi|84516459|ref|ZP_01003818.1| threonyl-tRNA synthetase [Loktanella vestfoldensis SKA53]
 gi|84509495|gb|EAQ05953.1| threonyl-tRNA synthetase [Loktanella vestfoldensis SKA53]
          Length = 648

 Score =  675 bits (1741), Expect = 0.0,   Method: Composition-based stats.
 Identities = 323/652 (49%), Positives = 437/652 (67%), Gaps = 10/652 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           + I LTFPDG+ + +    T  DVA  IS SL KKA++  +NG   DL  P++ +  I I
Sbjct: 2   AQISLTFPDGNSRQYDAGVTAGDVASDISPSLRKKAISATVNGAHWDLQWPIQADAQIAI 61

Query: 62  ITPEDPR-SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            T +D   +L ++RH  AHIMA AVQ IWP+ QV IGP+I+DG+YYDFD+++PF+ ++L 
Sbjct: 62  NTMKDEAPALELVRHDLAHIMARAVQEIWPDTQVTIGPVIKDGWYYDFDRKEPFTPEDLG 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEKKM+EII +      +     +A + +  + E YKVE+++SIP  E + +Y  G+W 
Sbjct: 122 LIEKKMKEIINKRDDVRTEIWDRARAVQYYTDRGEPYKVELIDSIPGNEPLRMYWHGDWQ 181

Query: 181 DLCRGPHVRSTGQ-VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           DLCRGPH+++TGQ     FKLM +AGAYWRGDS RPML RIYGTA+  +  L  +L+ LE
Sbjct: 182 DLCRGPHLQNTGQVPADAFKLMSIAGAYWRGDSTRPMLQRIYGTAFTNKDALKDHLHRLE 241

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQ 298
           E+ KRDHRKL REM+LFH+ E+  G +FWH  GW I+  L  YMRR+ +   Y E+NTPQ
Sbjct: 242 EAAKRDHRKLGREMNLFHMQEEAPGQVFWHPDGWTIYTELQDYMRRRQRAGGYVEVNTPQ 301

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHWD Y+ NMF V+  ++  ++    ALKPMNCP HV +FN GLKSYR+L
Sbjct: 302 VVDRKLWEKSGHWDKYQENMFIVEVDEEHAREKAVNALKPMNCPCHVQIFNQGLKSYRDL 361

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFGS  R EPSG+LHG+MRVRGFTQDD H+FC ++Q+  E  +    +  +Y D 
Sbjct: 362 PLRMAEFGSCARYEPSGALHGIMRVRGFTQDDGHIFCREDQIEPETARFIAFLSRVYADL 421

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF    +KLSTRPE+R+GSDA WD  E  +               +  +L GEGAFYGPK
Sbjct: 422 GFNDWTIKLSTRPEQRIGSDATWDMMEKALGDACRAAGY------DFELLEGEGAFYGPK 475

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ L DAIGR+WQCGT+QVD NLP R +A Y+ +  EK  PVM+HRA  GS ERFIGI+
Sbjct: 476 LEFTLTDAIGRNWQCGTLQVDANLPERLDAEYIGTDGEKHRPVMLHRATLGSFERFIGIL 535

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE   G LP WL+P Q +V TI S A +YA+++   L +  +  E D RNE INYK+REH
Sbjct: 536 IEEHAGKLPFWLAPRQVVVATIVSDADDYARDLVAALTAAGVRAEADTRNEKINYKVREH 595

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDC 650
           S+ K+P+I+  G +E  ER+   R+ G T T+ V++ + +  L + + PPD 
Sbjct: 596 SVGKVPVILAVGAREVEERTATARQLGETQTRVVTMDEIVAELKQRATPPDL 647


>gi|114566616|ref|YP_753770.1| threonyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|122318333|sp|Q0AY05|SYT_SYNWW RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|114337551|gb|ABI68399.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Syntrophomonas
           wolfei subsp. wolfei str. Goettingen]
          Length = 635

 Score =  675 bits (1741), Expect = 0.0,   Method: Composition-based stats.
 Identities = 281/643 (43%), Positives = 409/643 (63%), Gaps = 16/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +   DGS + +P   +   VAE IS  LAK A+A   NGK+ DL+  V  +G +E++
Sbjct: 1   MISIRLKDGSQREYPEGISLLQVAEDISPKLAKNAMAAVFNGKISDLNSQVKEDGCLELL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
             ED R+  V RHS AH+MA+AV+ +WPE ++AIGP I+ GFYYDFD    F+ ++ A I
Sbjct: 61  DFEDERAREVYRHSSAHVMAQAVKRLWPESKLAIGPAIDKGFYYDFDSGHTFTPEDFAAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E++M+ II  D P +++ LS E+A + F  + E YK+E++E +P    ++ Y+QGE+ DL
Sbjct: 121 EEEMKRIIKADYPIVRKELSREEALQFFSERSEDYKLELIEDLPEDAVISTYQQGEFVDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPH+ STG++K   K+M +AGAYWRG    PML R+Y T++  +  L  YL  LEE++
Sbjct: 181 CAGPHLPSTGRLK-AIKVMSLAGAYWRGSERNPMLQRVYATSFPKKSMLDDYLQKLEEAK 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD 301
           KRDHR+L RE+ LF + ++G G  F+  KG  +   L ++ R + +   Y+EI TP +L 
Sbjct: 240 KRDHRRLGRELGLFVVLDEGPGFPFFLPKGMVLRNELENFWREEHRKAGYQEIRTPIILS 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW++SGHWD Y+ NM+       T  D   +A+KPMNCPG + V+   L SY+ELP+R
Sbjct: 300 RELWERSGHWDHYKDNMYF------TTIDEGDYAIKPMNCPGGLLVYKQNLHSYKELPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           + E G V+R+E SG LHGLMRVR FTQDDAH+F   EQ+ +E   + +L+   Y  FGF 
Sbjct: 354 MGEMGLVHRHEMSGVLHGLMRVRAFTQDDAHIFMLPEQIIDEIKGVMDLVDRFYSLFGFP 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LST+PEK +GSD +W+ A N +   L+      +  +   V  G+GAFYGPK ++
Sbjct: 414 YH-VELSTKPEKAMGSDEIWEVATNALIKALE------ERGMEYKVNEGDGAFYGPKIDF 466

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L+D++ R WQCGTIQ+DF +P +F+  YV     K  PVMIHR ++GSIERFIGI+ E+
Sbjct: 467 HLQDSLDRTWQCGTIQLDFQMPEKFDLTYVGEDGGKHRPVMIHRVIYGSIERFIGILTEH 526

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           F G  PLWL+P+Q  V  IT  + +YA+++   L+   + +E DFR+E I YKIRE  ++
Sbjct: 527 FGGAFPLWLAPVQVRVLPITQRSQDYARQVVAELEQAGIRVEADFRSEKIGYKIREGQLQ 586

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIP +++ GD+EA E ++ +R           L +    + KE
Sbjct: 587 KIPYLLVLGDREAEEGTVSVRHRKEGDLGAKLLEEFKQTIVKE 629


>gi|294793964|ref|ZP_06759101.1| threonine--tRNA ligase [Veillonella sp. 3_1_44]
 gi|294455534|gb|EFG23906.1| threonine--tRNA ligase [Veillonella sp. 3_1_44]
          Length = 636

 Score =  675 bits (1741), Expect = 0.0,   Method: Composition-based stats.
 Identities = 278/644 (43%), Positives = 408/644 (63%), Gaps = 16/644 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEI 61
           +D+K+  PDGS K +    T  +  + +S SLAKK +A  +NG++ DL + + +GS +  
Sbjct: 2   ADVKIILPDGSAKEYAAGTTLGEAVKQLSNSLAKKVLAANVNGELTDLREELVDGSEVAF 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +T ED      +RHS +HI+A+AV+ +WPE ++AIGP I+ GFYYD D E   + ++L +
Sbjct: 62  LTFEDEGGKHTLRHSASHILAQAVKRLWPEAKLAIGPAIDKGFYYDIDMEHILTPEDLGK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK+M  I+  + P  K  +  ++A E F++K E YKVE+++ +P    ++ Y QG++ D
Sbjct: 122 IEKEMSRIVKENLPITKSVMPRQEAIEFFKAKNEDYKVELIQDLPEDAVISCYSQGDFID 181

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LC GPHV STG+VK F KL  +AGAYWRGD    ML RIYGTA+  ++EL  YL+ LEE+
Sbjct: 182 LCAGPHVASTGKVKAF-KLQSIAGAYWRGDEKNKMLQRIYGTAFEKKEELDAYLHMLEEA 240

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
            KRDHRKL +E+ LF I E+G G  F+  KG  +   L ++ R    + +YEEI TP +L
Sbjct: 241 AKRDHRKLGKELGLFVIKEEGPGFPFFLPKGMALRNELENFWREVHHEFEYEEIRTPIIL 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ LW+ SGHW  YR NM+       TI D   +A+KPMNCPG + V+ + + SYR+ P+
Sbjct: 301 NKQLWETSGHWFHYRENMYT------TIIDEEEYAIKPMNCPGGILVYQNEMHSYRDFPL 354

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R AE G V+R+E SG+LHGL RVR FTQDDAHVF    QM +E +K+  L   IY  FG 
Sbjct: 355 RYAELGLVHRHELSGALHGLFRVRAFTQDDAHVFMLPSQMQSELMKVIELFDRIYSQFGL 414

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           +   V+LST+P+  +G DA+W+ A   ++  ++         I   +  G+GAFYGPK +
Sbjct: 415 KYH-VELSTKPDNAMGDDAIWEAATEALRNAIEA------KGIPYVINPGDGAFYGPKLD 467

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           Y ++D++GR WQCGTIQ+D NLP RF   YV    +K  P+MIHRA FGS+ERFIGI+ E
Sbjct: 468 YHIEDSLGRTWQCGTIQLDMNLPERFQIEYVGEDGQKHRPIMIHRACFGSMERFIGILTE 527

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           ++ G  P W++P+Q  +  I+   VEYA+++A  +   ++ +E D R+E I YKIR+  +
Sbjct: 528 HYAGAFPTWMAPVQVKILPISEKHVEYAKDLAKQMHRDYVRVEVDDRSEKIGYKIRQAQM 587

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            K+P +++ GDKE  E ++ +R+ G      V   +    +  E
Sbjct: 588 AKVPYMLVVGDKEVEEGTVNVRKHGGDELGSVPFEEFFNSIKTE 631


>gi|148555657|ref|YP_001263239.1| threonyl-tRNA synthetase [Sphingomonas wittichii RW1]
 gi|148500847|gb|ABQ69101.1| threonyl-tRNA synthetase [Sphingomonas wittichii RW1]
          Length = 690

 Score =  675 bits (1741), Expect = 0.0,   Method: Composition-based stats.
 Identities = 297/667 (44%), Positives = 428/667 (64%), Gaps = 17/667 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           M   + +T PDGS +      T +++A +I   LAK A+A  ++G++ DL  P+  + ++
Sbjct: 23  MSDLLTITLPDGSAREVKTGTTPAEIAAAIGPGLAKAALAARVDGELRDLDRPLEKDSAL 82

Query: 60  EIITPEDP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD---KEQPFS 115
            ++T  D   +L + RH  AH++AEAVQS++P  Q+  GP  +DGFYYDF       PF+
Sbjct: 83  ALVTARDEADALDLARHDYAHVLAEAVQSLFPGTQITFGPSTDDGFYYDFAPAPGRGPFT 142

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            +EL  IE +M+ IIA + P  ++  S E+    ++ + E +K E    +P  E +T+Y 
Sbjct: 143 DEELPAIEAEMRRIIAANKPLRREVWSREQLISRWKQQGETFKAEWAAELPGDEPLTVYW 202

Query: 176 QGE-WFDLCRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQ 233
            G+ W D+CRGPH+ STG++  + FKL +V+GAYWRGD    MLSRIYGT W  +++L  
Sbjct: 203 SGDDWLDMCRGPHLPSTGKLDPQAFKLTRVSGAYWRGDQKNAMLSRIYGTGWLNKKQLDA 262

Query: 234 YLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYE 292
           +L  LEE+ KRDHR++ +EMDLFH+  +  G +FWH KG+++++ L +YMRRK+    Y 
Sbjct: 263 HLTRLEEAAKRDHRRIGQEMDLFHLQSEAQGSVFWHPKGFRLWRALEAYMRRKLDAAGYV 322

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL--------RTFALKPMNCPGH 344
           E+ TPQ++D   W+QSGHW  YR NMF V       ++            ALKPMNCP H
Sbjct: 323 EVKTPQLMDARQWEQSGHWGKYRENMFVVPDEIPNAEEEGPVLSGESELMALKPMNCPAH 382

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           V +F  G+KSYR+LP+R+AEFG  +RNEP G+LHG+MRVR FTQDDAH+F  ++Q+  E 
Sbjct: 383 VLIFRQGIKSYRDLPIRMAEFGCCHRNEPHGALHGIMRVRQFTQDDAHIFVREDQLIAEI 442

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
               +L+ ++Y+D GFE+  +KL+ RPEKR GS+ +WD AE  ++  +     +++    
Sbjct: 443 KDFCDLLDAVYRDLGFEQYAIKLALRPEKRFGSEEMWDKAEQTLRDAVAASGRATE-AFG 501

Query: 465 TGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIH 524
              L GEGAFY PK E+ L DAIGR WQ GTIQ D  LP R +A YV    E+  PVM+H
Sbjct: 502 WEELEGEGAFYAPKLEFHLTDAIGRTWQVGTIQADTVLPERLDASYVGEDGERHRPVMLH 561

Query: 525 RAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIET 584
           RA+ G+ ERFIGI+IE+  G  PLWL+P+QA+V TI S A +YA+E+   L +  L +E+
Sbjct: 562 RAILGTFERFIGILIEHHAGRFPLWLAPVQAVVATIVSDADDYAREVEAKLAAAGLRVES 621

Query: 585 DFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           D RNE INYK+REHS+ K+P +++ G +EA E ++ IRR G      + L +AI  L  E
Sbjct: 622 DLRNEKINYKVREHSLAKVPALLVVGKREAEEGTVAIRRLGEQAQTVLPLEEAIAALLAE 681

Query: 645 SLPPDCQ 651
           + PPD +
Sbjct: 682 ATPPDLR 688


>gi|21231898|ref|NP_637815.1| threonyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66767974|ref|YP_242736.1| threonyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|188991100|ref|YP_001903110.1| threonyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. B100]
 gi|25453287|sp|Q8P7Z2|SYT_XANCP RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|81306049|sp|Q4UW57|SYT_XANC8 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|229558465|sp|B0RRG9|SYT_XANCB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|21113622|gb|AAM41739.1| threonyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66573306|gb|AAY48716.1| threonyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|167732860|emb|CAP51054.1| unnamed protein product [Xanthomonas campestris pv. campestris]
          Length = 636

 Score =  675 bits (1741), Expect = 0.0,   Method: Composition-based stats.
 Identities = 292/647 (45%), Positives = 422/647 (65%), Gaps = 17/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP  I +T PDGS + F    +   VA+SI   LAK  +A  ++G++ D SD +  + S+
Sbjct: 1   MP-MITITLPDGSRREFDAPVSVMQVAQSIGAGLAKATIAGQVDGQLVDASDLIEHDASL 59

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   + +IRHSCAH++  AV+ ++P+V++ IGP+I +GFYYD   E+PF+ +++
Sbjct: 60  RIITAKDAEGVEIIRHSCAHLVGHAVKQLYPDVKMVIGPVIAEGFYYDIYSERPFTPEDM 119

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-ENVTLYRQGE 178
           A IE++MQ++IA+D   +K+     +  E+F  + E YK+ ++E +      + LY   E
Sbjct: 120 AAIEQRMQQLIAQDYDVIKKVTPRAEVIEVFAQRGEEYKLRLIEDMSDDITAMGLYYHQE 179

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +T  +K F KL +++GAYWRGD+    L RIYGTAW  +++L  Y+  +
Sbjct: 180 YVDMCRGPHVPNTRFLKAF-KLTRISGAYWRGDAKNEQLQRIYGTAWADKKQLDAYILRM 238

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE++KRDHRK+ +  DLFH+ E+  G++FWH KGW ++Q +  YMR+  +D  Y E+  P
Sbjct: 239 EEADKRDHRKIGKAQDLFHLQEEAPGLVFWHPKGWSLWQVVEQYMRKVYRDSGYGEVRCP 298

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           Q+LD  LWQ+SGHWD+Y+  MF       T  + RT+A+KPMNCPGHV VFN GL SYR+
Sbjct: 299 QILDVSLWQKSGHWDNYQDAMFF------TESEKRTYAVKPMNCPGHVQVFNQGLHSYRD 352

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R  EFG+ +RNEPSG+LHG++RVRGFTQDD HVFC + Q+  E    H   +++Y  
Sbjct: 353 LPIRYGEFGACHRNEPSGALHGILRVRGFTQDDGHVFCLESQIEAEVTAFHQQALAVYTA 412

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF+ I +K++ RPEKR+G DA WD AE  ++  L          +    L GEGAFYGP
Sbjct: 413 FGFDDIQIKIALRPEKRLGDDATWDKAEAALRSAL------GVCGVEWQELPGEGAFYGP 466

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K EY LKDAIGR WQ GT+QVDF +P R  A YV+ HS+K HPVM+HRA+ GS+ERFIGI
Sbjct: 467 KIEYHLKDAIGRTWQLGTMQVDFMMPGRLGAEYVDEHSQKKHPVMLHRAIVGSMERFIGI 526

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE+  G  P WL+P+Q +V  IT +  EY   +   L +    +  D RNE I YKIRE
Sbjct: 527 LIEHHAGAFPAWLAPVQVVVANITDAQAEYVDSVRKTLANQGFRVSADLRNEKIGYKIRE 586

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H+++++P +++ GD+E    ++ +R         +++   I  L  E
Sbjct: 587 HTLQRVPYLLVVGDREKENGAVAVRTRSGEDLGTMTVSAFIERLQAE 633


>gi|113970292|ref|YP_734085.1| threonyl-tRNA synthetase [Shewanella sp. MR-4]
 gi|117920487|ref|YP_869679.1| threonyl-tRNA synthetase [Shewanella sp. ANA-3]
 gi|123029660|sp|Q0HIT9|SYT_SHESM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|166225501|sp|A0KWV4|SYT_SHESA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|113884976|gb|ABI39028.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Shewanella sp.
           MR-4]
 gi|117612819|gb|ABK48273.1| threonyl-tRNA synthetase [Shewanella sp. ANA-3]
          Length = 642

 Score =  675 bits (1741), Expect = 0.0,   Method: Composition-based stats.
 Identities = 287/647 (44%), Positives = 417/647 (64%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS + F    +  DVA  I   LAK  +A  +NG++ D  D +  +  +
Sbjct: 1   MPV---ITLPDGSKREFAHPVSTLDVAADIGPGLAKACIAGRVNGELKDACDLIETDAEL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   + ++RHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D E   + +++
Sbjct: 58  SIITAKDEEGIEILRHSCAHLLGHAIKQLWPQTKMAIGPVIDNGFYYDIDLEHKLTQEDI 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M E+   +   +K+ +S ++AR+ F ++ E YK+ IL E+I       LY   E
Sbjct: 118 EALEKRMLELAKTNYDVVKRVVSWQEARDTFAARGEEYKIAILDENISKDATPALYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KLM +AGAYWRG+S   ML RIYGTAW  ++ L+ +L  L
Sbjct: 178 YTDMCRGPHVPNMRFCHHF-KLMSIAGAYWRGNSENKMLQRIYGTAWADKKALSTHLARL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF  L  ++RRK+ +  Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWSIFLELERFIRRKLNQYTYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+
Sbjct: 297 LMMDRVLWERSGHWDKYSEAMFT------TSSENREYAVKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFG  +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+  E      ++   Y  
Sbjct: 351 LPLRMAEFGCCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQVQAEVSSCIQMVYDTYST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFE I+VKLSTRPEKR+G DA+WD AE  +K  L        + I   +L GEGAFYGP
Sbjct: 411 FGFENIVVKLSTRPEKRIGDDAMWDRAEEALKQALRA------NNIEFTILPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+D+ LPSR  A YV   + +  PVMIHRA+ GS+ERF+GI
Sbjct: 465 KIEFTLHDCLDRAWQCGTVQLDYALPSRLGATYVAEDNSRQTPVMIHRAILGSLERFLGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE + G  P WL+P+Q +V  IT    +Y +E+    K   +    D RNE I +KIRE
Sbjct: 525 LIEEYAGRFPTWLAPMQVVVMNITDKQADYVEEVVKFFKEQGIRASFDLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H+++++P +++ GD+E   + + +R        K+ + D    + ++
Sbjct: 585 HTLRRVPYLLVVGDQEMENKEVAVRTRDGVDLGKMRIEDFAAKIHQQ 631


>gi|329296183|ref|ZP_08253519.1| threonyl-tRNA synthetase [Plautia stali symbiont]
          Length = 642

 Score =  675 bits (1741), Expect = 0.0,   Method: Composition-based stats.
 Identities = 291/647 (44%), Positives = 428/647 (66%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +TFPDGS + F    +  D+A  I   LAK  +A  +NG++ D  DP+  +  +
Sbjct: 1   MPV---ITFPDGSQRVFDCPVSVMDIALDIGPGLAKAGIAGRVNGELVDAVDPITRDAQV 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L +IRHSCAH++  A++ +WP  ++AIGP+I++GFYYD D +   + ++L
Sbjct: 58  AIITAKDEAGLEIIRHSCAHLLGHAIKQLWPNTKMAIGPVIDNGFYYDVDLDHTLTQEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M ++   +   +K+ +S ++AR++F ++ E+YK  IL E+I   +   LY   E
Sbjct: 118 ELLEKRMHQLAETNYDVVKKKVSWQEARDVFAARGESYKTTILDENISHDDRPGLYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KL K++GAYWRG+S+  ML RIYGTAW   ++L  YL  L
Sbjct: 178 YIDMCRGPHVPNMRFCHHF-KLQKISGAYWRGNSDNKMLQRIYGTAWADNKQLAAYLQRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRK+ + +DL+H+ E+  G++FWH  GW IF+ L  ++R K+K+ DY+E+  P
Sbjct: 237 EEAAKRDHRKIGKPLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRTKLKEYDYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW+++GHWD+Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 297 FMMDRVLWEKTGHWDNYKEVMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT++Q+ +E      ++  +Y  
Sbjct: 351 LPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEDQVRDEVNSCIRMVYDMYST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI+VKLSTRPEKR+GSD +WD AE  +   L       ++ I      GEGAFYGP
Sbjct: 411 FGFEKIVVKLSTRPEKRIGSDEMWDRAEVDLAEALK------ENNIPFEYQPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF+LP R +A YV   +++  PVMIHRA+ GS+ERFIGI
Sbjct: 465 KIEFTLHDCLDRAWQCGTVQLDFSLPKRLDATYVGETNDRQTPVMIHRAILGSMERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E F G  P WL+P+QA+V  IT    EY  E+   L++  + ++ D RNE I +KIRE
Sbjct: 525 LTEEFAGFFPSWLAPVQAVVMNITDGQAEYVSELTKKLQNAGIRVKADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H+++++P +++CG+KE     + +R         + +   +  L +E
Sbjct: 585 HTLRRVPYMLVCGEKEVEAGKVAVRTRRGKDLGSMDVDVFVEKLQQE 631


>gi|188577599|ref|YP_001914528.1| threonyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|188522051|gb|ACD59996.1| threonyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 649

 Score =  675 bits (1741), Expect = 0.0,   Method: Composition-based stats.
 Identities = 287/644 (44%), Positives = 420/644 (65%), Gaps = 16/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +T PDGS + F    +   VA+SI   LAK  +A  ++G++ D SD +  + S+ II
Sbjct: 16  MINITLPDGSRREFESPVSVMQVAQSIGAGLAKATIAGRVDGQLVDASDVIDHDASLRII 75

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   + +IRHSCAH++  AV+ ++PEV++ IGP+I +GFYYD   E+PF+ +++A I
Sbjct: 76  TAKDAEGVEIIRHSCAHLVGHAVKQLYPEVKMVIGPVIAEGFYYDIYSERPFTPEDMAAI 135

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-ENVTLYRQGEWFD 181
           E++MQ +IA+D   +K+     +  E+F  + E YK+ +++ +      + LY   E+ D
Sbjct: 136 EQRMQALIAQDYDVIKKVTPRAEVIEVFAQRGEEYKLRLIDDMSDDITAMGLYYHQEYVD 195

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           +CRGPHV +T  +K F KL +++GAYWRGD+    L RIYGTAW  +++L  Y+  +EE+
Sbjct: 196 MCRGPHVPNTRFLKAF-KLTRISGAYWRGDAKNEQLQRIYGTAWADKKQLDAYILRMEEA 254

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
           +KRDHR++ +  DLFH+ E+  G++FWH KGW ++Q +  YMR+  +D  Y E+  PQ+L
Sbjct: 255 DKRDHRRIGKAQDLFHLQEEAPGLVFWHPKGWSLWQVVEQYMRKVYRDSGYGEVRCPQIL 314

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D  LWQ+SGHWD+Y+  MF       T  + RT+A+KPMNCPGHV VFN GL SYR+LP+
Sbjct: 315 DVSLWQKSGHWDNYQDAMFF------TESEKRTYAVKPMNCPGHVQVFNQGLHSYRDLPI 368

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R  EFG+ +RNEPSG+LHG++RVRGFTQDD HVFC + Q+ +E    H   +++Y  FGF
Sbjct: 369 RYGEFGACHRNEPSGALHGILRVRGFTQDDGHVFCLESQIESEVTAFHQQALAVYTAFGF 428

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           + I +K++ RPEKR+G DA WD AE  ++  L          +    L GEGAFYGPK E
Sbjct: 429 DDIQIKIALRPEKRLGDDATWDKAEAALRSAL------GVCGVEWQELPGEGAFYGPKIE 482

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           Y LKDAIGR WQ GT+QVDF +P R  A YV+ +S+K HPVM+HRA+ GS+ERFIGI+IE
Sbjct: 483 YHLKDAIGRTWQLGTMQVDFMMPGRLGAEYVDENSQKKHPVMLHRAIVGSMERFIGILIE 542

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +  G  P WL+P+Q +V  IT +  +Y   +   L +    +  D RNE I YKIREH++
Sbjct: 543 HHAGAFPSWLAPVQVVVANITDAQADYVDAVRKTLANQGFRVSADLRNEKIGYKIREHTL 602

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +++P +++ GD+E    ++ +R         +++   I  L  E
Sbjct: 603 QRVPYLLVVGDREKENGAVAVRTRSGEDLGTMTVSAFIERLQAE 646


>gi|292670652|ref|ZP_06604078.1| threonine-tRNA ligase [Selenomonas noxia ATCC 43541]
 gi|292647679|gb|EFF65651.1| threonine-tRNA ligase [Selenomonas noxia ATCC 43541]
          Length = 639

 Score =  675 bits (1741), Expect = 0.0,   Method: Composition-based stats.
 Identities = 289/644 (44%), Positives = 412/644 (63%), Gaps = 18/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            +KLT PDGSI+      T  DV + +S SLAKKA+A +++GKV DL+ PV ++ + +++
Sbjct: 1   MVKLTLPDGSIRETEAGTTLLDVVKGMSNSLAKKALAASLDGKVVDLTTPVTKDAAFQVL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPE--VQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           T  D      +RH+C+HIMA+AV+ ++PE  VQ+AIGP IE+GFYYDFD E   +  +L 
Sbjct: 61  TFADAGGRLALRHTCSHIMAQAVKRLYPESRVQLAIGPAIENGFYYDFDMEHQLTDADLR 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEK+M++I+  +    ++ +  ++A E F +K E YKVE++  +PA   +++Y QGE+ 
Sbjct: 121 DIEKEMKKIVKENLKLERREIPRDEAIEYFRAKGENYKVELIRDLPADATISIYTQGEFI 180

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLC GPHV STG+VK   KL  VAGAYWRG     ML RIYGTA+  Q+EL  YL+ LEE
Sbjct: 181 DLCAGPHVMSTGKVK-ALKLQSVAGAYWRGSEKNKMLQRIYGTAFEKQEELDAYLHMLEE 239

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           + KRDHRKL RE+DLF + E+G G  F+H  G  +   L+ Y R    +  Y+EI+TP +
Sbjct: 240 AAKRDHRKLGRELDLFSLHEEGPGFPFFHPNGMILRNALLEYWREVHRRYGYQEISTPVI 299

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           L + LW+ SGHW  YR NM+       T  D   +A+KPMNCPG + V+   L SYR+LP
Sbjct: 300 LSRKLWETSGHWFHYRENMYT------TEIDGEDYAIKPMNCPGCMLVYRSQLHSYRDLP 353

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +RLAE G V+R+E SG+LHGL RVR FTQDDAH+F T +Q+  E     NL   +Y+ FG
Sbjct: 354 LRLAELGLVHRHELSGALHGLFRVRNFTQDDAHLFVTPDQIEGEIQHTINLFDEVYRTFG 413

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
                 +LSTRPE  +GSD +WD A   ++  L+         ++  V  G+GAFYGPK 
Sbjct: 414 LSY-KAELSTRPEDSMGSDEMWDLATEGLRNALE------NRGLDYIVNEGDGAFYGPKI 466

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           ++ L+D+IGR WQCGTIQ+D +LP +F+  Y+    EK  PVM+HR V+GSIERFIGI+I
Sbjct: 467 DFHLRDSIGRTWQCGTIQLDMSLPEKFDLTYIGEDGEKHRPVMLHRVVYGSIERFIGILI 526

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           EN+ G  P+W++P+Q  +  IT     YA+ +   +    + +E D RNE   YKIRE  
Sbjct: 527 ENYAGAFPVWMAPVQVRILPITERHTAYAESLRGRMFDLGIRVEVDDRNEKTGYKIRESQ 586

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +KK P  ++ GD+E    ++ +R++G   +  ++  D I ++ +
Sbjct: 587 VKKTPYTLVVGDQEQETGAVALRKYGEKDSVVMAADDFIALVQE 630


>gi|255280775|ref|ZP_05345330.1| threonine--tRNA ligase [Bryantella formatexigens DSM 14469]
 gi|255268712|gb|EET61917.1| threonine--tRNA ligase [Bryantella formatexigens DSM 14469]
          Length = 642

 Score =  675 bits (1741), Expect = 0.0,   Method: Composition-based stats.
 Identities = 272/648 (41%), Positives = 401/648 (61%), Gaps = 16/648 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T  DG+ K +    T  ++A  IS  LA+ A A  ++G V DL   + R+  + I+T +
Sbjct: 3   ITLKDGTQKEYQQPMTILEIATDISEGLARAATAGEVDGNVEDLRTVIDRDCQLNILTFD 62

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
            P      RH+ +HIMA+A++ ++P+V++AIGP I DGFYYD D + P ++++L +IE +
Sbjct: 63  SPEGAGAFRHTTSHIMAQAIKRLYPDVKLAIGPSIADGFYYDIDSDTPLTAEDLEKIEAE 122

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M++I+    P  +     ++A   F+ K E YKVE++E +P    ++ Y+QGE+ DLC G
Sbjct: 123 MKKIVKEALPITRFTKPRDEAIAYFKEKNEPYKVELIEDLPEDAEISFYQQGEFVDLCAG 182

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PH+ ST  VK F KL  +AGAYWRG     ML+RIYGT++  + +L  Y+  +EE++KRD
Sbjct: 183 PHLMSTKPVKAF-KLTSLAGAYWRGSEKNKMLTRIYGTSFTKKADLEAYITRMEEAKKRD 241

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHL 304
           HRKL +++ LF + ++G G  F+   G  +   L+ Y R    K  Y EI+TP +L++ L
Sbjct: 242 HRKLGKQLGLFMMRDEGPGFPFFLPNGMIVKNALLDYWREIHRKAGYVEISTPIMLNRQL 301

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W+ SGHWD YR NM+       T+ D   FA+KPMNCPG + V+    +SYR+LP+R+ E
Sbjct: 302 WETSGHWDHYRENMYT------TVIDDTDFAIKPMNCPGGILVYQSEPRSYRDLPLRMGE 355

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
            G V+R+E SG LHGLMRVR F QDDAH+F T EQ+ +E   +  LI  +Y+ FGF+   
Sbjct: 356 IGLVHRHEKSGQLHGLMRVRCFNQDDAHIFMTPEQICDEIKGVVKLIDEVYQLFGFKYH- 414

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           V+LSTRPE  +GSD  W+ A + ++  LD +       ++  V  G+GAFYGPK ++ L+
Sbjct: 415 VELSTRPENSMGSDEDWEMATDGLRSALDDLG------LDYVVNEGDGAFYGPKIDFHLE 468

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D+IGR WQCGTIQ+DF LP RFN  Y+ +  EK  P+MIHR VFGS+ERFIGI+IE+F G
Sbjct: 469 DSIGRTWQCGTIQLDFQLPLRFNCEYIGADGEKHRPIMIHRVVFGSVERFIGILIEHFAG 528

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P WLSP Q  V  I+   ++YA ++   L  + +    D R E I YKIRE  + K+P
Sbjct: 529 AFPTWLSPEQVRVLPISDKYLDYADKVNAALNENGIRSSVDTRAEKIGYKIREARLAKVP 588

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
            +++ G KE  +  + +R        + +L D I  + +E    + +K
Sbjct: 589 YMLVVGAKEEEDGKVSVRSRFLGDEGQKNLDDFIAAIKEEIRTREMRK 636


>gi|83942907|ref|ZP_00955367.1| threonyl-tRNA synthetase [Sulfitobacter sp. EE-36]
 gi|83845915|gb|EAP83792.1| threonyl-tRNA synthetase [Sulfitobacter sp. EE-36]
          Length = 649

 Score =  675 bits (1741), Expect = 0.0,   Method: Composition-based stats.
 Identities = 325/653 (49%), Positives = 435/653 (66%), Gaps = 10/653 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           + I LT PDG+ + +    T  DVA  IS+SL KKA++  +NG   DL+ P+  + SI I
Sbjct: 2   AQITLTLPDGNARQYDAGITAGDVANDISKSLGKKAISATVNGAHYDLAWPINADASIAI 61

Query: 62  ITPEDP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            T  D  ++  ++RH  AHIMA AVQ +WP+ +V IGP+I+DG+YYDFD+++ F+ ++L 
Sbjct: 62  HTMADEAQANELVRHDLAHIMARAVQELWPDTKVTIGPVIKDGWYYDFDRKESFTPEDLG 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEKKM+EII +  P   +    E+A + +E   E YKVE++ SIP  E + +Y  G+W 
Sbjct: 122 LIEKKMKEIINKRDPVRTEVWDRERAIKHYEDNGEPYKVELINSIPGDEPLRMYWHGDWQ 181

Query: 181 DLCRGPHVRSTGQ-VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           DLCRGPH++ TGQ     FKLM +AGAYWRGDS+R ML RIYG A+  +++L  +L  LE
Sbjct: 182 DLCRGPHLQHTGQVPGDAFKLMSIAGAYWRGDSDRAMLQRIYGVAFTGKEKLKAHLNMLE 241

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQ 298
           E+ KRDHRKL REMDL+H+ E+  G +FWH  GW I+  L  YMRRK +   Y E+NTPQ
Sbjct: 242 EAAKRDHRKLGREMDLYHMQEEAPGQVFWHANGWLIYTQLQDYMRRKQRAGGYVEVNTPQ 301

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW+ SGHW+ Y+ +MF V+  ++  ++    ALKPMNCP HV +FN GLKSYR+L
Sbjct: 302 VVDRKLWEASGHWEKYQDHMFIVEVDEEHAREKSVNALKPMNCPCHVQIFNQGLKSYRDL 361

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFGS  R EPSG+LHG+MRVRGFTQDD H+FC ++Q+  E  K    +  IYKD 
Sbjct: 362 PLRMAEFGSCNRYEPSGALHGIMRVRGFTQDDGHIFCAEDQIEAETAKFIEFLSGIYKDL 421

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE   VK S RPEKR GSD +WD AE  +      +  + +  I   +  GEGAFYGPK
Sbjct: 422 GFENFSVKFSDRPEKRSGSDEVWDKAEAAL------LSATRKAGIEPTLNPGEGAFYGPK 475

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E++L DAIGRDWQCGT QVDF LP R +A Y+ S   K  PVM+HRA  GS ERFIGI+
Sbjct: 476 LEFVLTDAIGRDWQCGTHQVDFVLPERLDATYIGSDGAKHRPVMLHRATLGSFERFIGIL 535

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE   G LP WL+P Q +V +ITS A +Y  E+   LK+  +  + D RNE INYK+REH
Sbjct: 536 IEEHAGKLPFWLAPRQVVVASITSEADDYVHEVVATLKAQGVRADADIRNEKINYKVREH 595

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           S+ K+P+I+  G +E  E+++ +RR G   T   +L D    L  E+ PPD +
Sbjct: 596 SVGKVPVILAVGAREVEEKTVSVRRLGEKQTSVQALSDVANALGIEATPPDLR 648


>gi|226950568|ref|YP_002805659.1| threonine--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
 gi|254783516|sp|C1FKN0|SYT_CLOBJ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|226841746|gb|ACO84412.1| threonine--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
          Length = 635

 Score =  674 bits (1740), Expect = 0.0,   Method: Composition-based stats.
 Identities = 294/643 (45%), Positives = 419/643 (65%), Gaps = 16/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+T  DG +  F      SD+A  IS +L KKA+A  I+G+  DL   + ++ S+EI+
Sbjct: 1   MIKITLKDGKVMEFEEGIKISDIAMKISPALYKKALAAKIDGETVDLMTELHKDSSLEIL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T ED      +RH+ +H++A+AV+ ++PEV++AIGP I+ GFYYDF+ +  F+ + L +I
Sbjct: 61  TFEDEMGKWTLRHTGSHMLAQAVKRLYPEVKLAIGPAIDTGFYYDFEADFTFTPEMLEKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E ++++II  +    +  L  E+A +L + K E YKVE++E +P  E ++ Y+QG++ DL
Sbjct: 121 EAEIKKIIKENHKLERFELPREEAIKLMKEKNEDYKVELIEDLPEGEVISFYKQGDFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPHV STG+VK   KL+ +AGAYWRGD    ML RIYGTA+  + EL +YL  +EE++
Sbjct: 181 CAGPHVPSTGKVKSV-KLLSLAGAYWRGDEKNKMLQRIYGTAFTKKSELDEYLNMIEEAK 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLD 301
           KRDHRKL +E+DLF I E+G G  F+H KG  +   L S+ R +  K  Y+EI TP +L+
Sbjct: 240 KRDHRKLGKELDLFSIHEEGPGFPFFHPKGMIVRNILESFWREEHTKAGYQEIRTPLILN 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW QSGHWD Y+ NM+       T  D   +A+KPMNCPG + V+ + + SYR+LP+R
Sbjct: 300 EALWHQSGHWDHYKENMYF------TNIDDGDYAIKPMNCPGGILVYKNSMHSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           L+E G V+R+E SG+LHGLMRVR FTQDDAH++ TKEQ+  E + I  LI   YK FGFE
Sbjct: 354 LSELGIVHRHELSGALHGLMRVRCFTQDDAHLYMTKEQIKEEIVGIIKLIDKFYKLFGFE 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPE  +GSD  W+ A N ++  LD+I           V  G+GAFYGPK ++
Sbjct: 414 YF-VELSTRPEDSMGSDEDWEIATNGLREALDSIGK------EYRVNEGDGAFYGPKIDF 466

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            LKD IGR WQCGTIQ+DF +P RF+  Y+ +  EK  PVM+HR ++GS+ERFIGI+IE 
Sbjct: 467 HLKDCIGRTWQCGTIQLDFQMPERFDLSYIGADGEKHRPVMVHRTIYGSVERFIGILIEQ 526

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  P WL+P+Q  +  IT S  +Y +++   LK +++ +E D RNE I YKIRE  ++
Sbjct: 527 YAGAFPTWLAPVQVKLMNITDSQYDYLKKVEEALKENNIRVEIDTRNEKIGYKIREAQLQ 586

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K+P ++I GDKE     + +R         +SL + I  +  E
Sbjct: 587 KVPYMLILGDKEVEAGKVAVRSRKDGDLGAISLEEFIEKIKNE 629


>gi|319794591|ref|YP_004156231.1| threonyL-tRNA synthetase [Variovorax paradoxus EPS]
 gi|315597054|gb|ADU38120.1| threonyl-tRNA synthetase [Variovorax paradoxus EPS]
          Length = 635

 Score =  674 bits (1740), Expect = 0.0,   Method: Composition-based stats.
 Identities = 302/643 (46%), Positives = 438/643 (68%), Gaps = 15/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I++T PD S + FP   + ++VA+SI   LAK  VA  ++G++ D SD +  +  ++II
Sbjct: 1   MIQITLPDNSRREFPGPVSVAEVAQSIGPGLAKMTVAGKVDGRLVDASDVIDHDAKLQII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TP+D   L +IRHS AH++  AV+ ++P  ++ IGP+I++GFYYD   E+PF+ +++A I
Sbjct: 61  TPKDDEGLEIIRHSTAHLVGHAVKQLYPTAKMVIGPVIDEGFYYDISYERPFTPEDMAAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M+E+IA+D   +K+     +  E+F+S+ E YK+ ++E +P ++ + LY   E+ D+
Sbjct: 121 EARMRELIAQDYDVVKKMTPRAEVIEVFKSRGEDYKLRLVEDMPDEQAMGLYYHQEYVDM 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +T  +K F KL K+AGAYWRGD+    L RIYGTAW  +++L QY+  +EE+E
Sbjct: 181 CRGPHVPNTRFLKVF-KLTKLAGAYWRGDAKNEQLQRIYGTAWADKKQLDQYIQRIEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL +E+DLFHI E   GV+FWH KGW ++Q +  YMR   +D  Y E+  PQ+LD
Sbjct: 240 KRDHRKLGKELDLFHIDEVAPGVVFWHPKGWAVWQAVEQYMRGIYRDTGYWEVKGPQILD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+++GHW +YR NMF       T  + R +ALKPMNCPGHV +F   L+SYR+LP+R
Sbjct: 300 KSLWEKTGHWQNYRDNMFT------TESEKREYALKPMNCPGHVLIFKSDLRSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
             EFG  +RNEPSG+LHG+MRVRGFTQDD H+FCT++Q+ +EC+     +  +Y DFGF 
Sbjct: 354 YGEFGQCHRNEPSGALHGIMRVRGFTQDDGHIFCTEDQILDECIAYTEQLQKVYADFGFT 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            I+ K++TRPE RVGSD LWD AE+    V+++++ S  D I   +  G+GAFYGPK EY
Sbjct: 414 DILYKVATRPENRVGSDELWDKAEHA---VMESLRRSGVDFI---ISPGDGAFYGPKIEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L+DAIGR WQCGT+QVDFN   R    YV   S + HPVM+HRA+ GS+ERFIG++IE+
Sbjct: 468 TLRDAIGRQWQCGTMQVDFNTAERLGGEYVTESSGRAHPVMLHRAIVGSLERFIGMLIEH 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G LP WL+P+Q  V  I+    +YA ++A  L++  L ++ D  NE I YKIR+HS++
Sbjct: 528 HSGALPAWLAPVQVAVLNISEGQADYAAQVAKTLQNQGLRVQLDLHNEKITYKIRKHSLQ 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K+P I++ GDKE    ++ +R  G+     +SL   +  L ++
Sbjct: 588 KLPYILVVGDKEKEAGAVAVRARGNQDLGAMSLESFVQRLVQD 630


>gi|126698152|ref|YP_001087049.1| threonyl-tRNA synthetase [Clostridium difficile 630]
 gi|254974173|ref|ZP_05270645.1| threonyl-tRNA synthetase [Clostridium difficile QCD-66c26]
 gi|255091574|ref|ZP_05321052.1| threonyl-tRNA synthetase [Clostridium difficile CIP 107932]
 gi|255099679|ref|ZP_05328656.1| threonyl-tRNA synthetase [Clostridium difficile QCD-63q42]
 gi|255313300|ref|ZP_05354883.1| threonyl-tRNA synthetase [Clostridium difficile QCD-76w55]
 gi|255515991|ref|ZP_05383667.1| threonyl-tRNA synthetase [Clostridium difficile QCD-97b34]
 gi|255649082|ref|ZP_05395984.1| threonyl-tRNA synthetase [Clostridium difficile QCD-37x79]
 gi|306519197|ref|ZP_07405544.1| threonyl-tRNA synthetase [Clostridium difficile QCD-32g58]
 gi|123066930|sp|Q189B8|SYT_CLOD6 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|115249589|emb|CAJ67406.1| Threonyl-tRNA synthetase [Clostridium difficile]
          Length = 639

 Score =  674 bits (1740), Expect = 0.0,   Method: Composition-based stats.
 Identities = 279/643 (43%), Positives = 404/643 (62%), Gaps = 16/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+   DGSIK F    +  DVA+SIS  LA+  VA ++NG+V  L   +  +  + + 
Sbjct: 1   MIKVALKDGSIKEFENAISVMDVAKSISEGLARNVVAASVNGEVVGLDHIIDTDCDLNLF 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
             ED     V RH+ AHI+A+A++ ++PE ++AIGP IE+GFYYD D +     ++L +I
Sbjct: 61  KFEDKEGKEVFRHTSAHILAQAIKRLYPEAKLAIGPSIENGFYYDIDLDHRLVPEDLEKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M++I   D    +  L   +A EL + + E YKVE++  +P  E ++ Y+QG++ DL
Sbjct: 121 EAEMKKIAKEDLKIERFELPRNEALELMKEQGEDYKVELISDLPESEIISFYKQGDFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ ST +VK   KL  VAGAYWRGD N  ML RIYGT++   ++L +YL+ LEE++
Sbjct: 181 CRGPHLPSTKKVK-AVKLQSVAGAYWRGDENNKMLQRIYGTSFEKNKDLEEYLHLLEEAK 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KRDHRKL +E+ LF I E+G G   +  KG ++   L+ + R    K  Y EI +P +L+
Sbjct: 240 KRDHRKLGKELGLFMIPEEGPGFPMFLPKGMELKNELLKFWREIHRKAGYIEIESPIILN 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW  Y+ NM+ VK       D   +A+KPMNCPG +  +N  L SYR+ P+R
Sbjct: 300 RKLWETSGHWYHYKENMYTVKI------DDEDYAIKPMNCPGGLIYYNSQLHSYRDFPMR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AE G V+R+E SG+L GLMRVR FTQDD+H+F   EQ+ +E   + NLI  IYK FGFE
Sbjct: 354 VAELGRVHRHELSGALQGLMRVRAFTQDDSHIFMLPEQIKDEIKGVANLIDGIYKTFGFE 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
             + +LSTRPE  +GSD  W+ AEN ++  L+ +       +   +  G+GAFYGPK ++
Sbjct: 414 YNL-ELSTRPENSMGSDEEWEAAENGLREALEELG------LPYTINEGDGAFYGPKIDF 466

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            LKD +GR WQCGTIQ+D  LP +F+  Y+    EK  PVMIHR  FGSIERFIGI+IE+
Sbjct: 467 HLKDCLGRTWQCGTIQLDMQLPRQFDNTYIGQDGEKHRPVMIHRVAFGSIERFIGILIEH 526

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  P+WLSP Q  +  I+   ++YA E+   L    + +E D R E I +KIRE  ++
Sbjct: 527 YAGKFPVWLSPTQVKILPISDKFMDYANEVKKELFDKGIRVELDDRAEKIGFKIREAQLE 586

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K+P ++I G+KE ++ ++ +R         + L + I  ++KE
Sbjct: 587 KVPYMLIVGEKEVADNNVSVRSRDKGEIGSIKLDEFIASISKE 629


>gi|114047517|ref|YP_738067.1| threonyl-tRNA synthetase [Shewanella sp. MR-7]
 gi|123326545|sp|Q0HV45|SYT_SHESR RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|113888959|gb|ABI43010.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Shewanella sp.
           MR-7]
          Length = 642

 Score =  674 bits (1740), Expect = 0.0,   Method: Composition-based stats.
 Identities = 287/647 (44%), Positives = 416/647 (64%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS + F    +  DVA  I   LAK  +A  +NG++ D  D +  +  +
Sbjct: 1   MPV---ITLPDGSKREFAHPVSTLDVAADIGPGLAKACIAGRVNGELKDACDLIETDAEL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   + ++RHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D E   + +++
Sbjct: 58  SIITAKDEEGIEILRHSCAHLLGHAIKQLWPQTKMAIGPVIDNGFYYDIDLEHKLTQEDI 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M E+   +   +K+ +S ++AR+ F ++ E YK+ IL E+I       LY   E
Sbjct: 118 EALEKRMLELAKTNYDVVKRVVSWQEARDTFAARGEEYKIAILDENISKDATPALYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KLM +AGAYWRG+S   ML RIYGTAW  ++ L+ +L  L
Sbjct: 178 YTDMCRGPHVPNMRFCHHF-KLMSIAGAYWRGNSENKMLQRIYGTAWADKKALSTHLARL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF  L  ++RRK+ +  Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWSIFLELERFIRRKLNQYTYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+
Sbjct: 297 LMMDRVLWERSGHWDKYSEAMFT------TSSENREYAVKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFG  +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+  E      ++   Y  
Sbjct: 351 LPLRMAEFGCCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQVQAEVSSCIQMVYDTYST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFE I+VKLSTRPEKR+G DA+WD AE  +K  L          I   +L GEGAFYGP
Sbjct: 411 FGFENIVVKLSTRPEKRIGDDAMWDRAEEALKQALRA------KNIEFTILPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+D+ LPSR  A YV   + +  PVMIHRA+ GS+ERF+GI
Sbjct: 465 KIEFTLHDCLDRAWQCGTVQLDYALPSRLGATYVAEDNSRQTPVMIHRAILGSLERFLGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE + G  P WL+P+Q +V  IT    +Y +E+    K   +    D RNE I +KIRE
Sbjct: 525 LIEEYAGRFPTWLAPMQVVVMNITDKQADYVEEVVKFFKEQGIRASFDLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H+++++P +++ GD+E   + + +R        K+ + D    + ++
Sbjct: 585 HTLRRVPYLLVVGDQEMENKEVAVRTRDGVDLGKMRIEDFAAKIHQQ 631


>gi|239814876|ref|YP_002943786.1| threonyl-tRNA synthetase [Variovorax paradoxus S110]
 gi|259516786|sp|C5CUU2|SYT_VARPS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|239801453|gb|ACS18520.1| threonyl-tRNA synthetase [Variovorax paradoxus S110]
          Length = 635

 Score =  674 bits (1740), Expect = 0.0,   Method: Composition-based stats.
 Identities = 300/643 (46%), Positives = 432/643 (67%), Gaps = 15/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I++T PD S + FP   + ++VA+SI   LAK  VA  ++GK+ D SD +  +  ++II
Sbjct: 1   MIQITLPDNSRREFPGPVSVAEVAQSIGPGLAKMTVAGKVDGKLVDASDVIDHDARLQII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TP D   L +IRHS AH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A I
Sbjct: 61  TPRDDEGLEIIRHSTAHLVGHAVKQLYPTAKMVIGPVIEEGFYYDISYERPFTPEDMAAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M+E+IA+D   +K+     +  E+F+S+ E YK+ ++E +P ++ + LY   E+ D+
Sbjct: 121 EARMRELIAQDYDVVKKMTPRAEVIEVFKSRGEDYKLRLVEDMPDEQAMGLYYHQEYVDM 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +T  +K F KL K+AGAYWRGD+    L RIYGTAW  +++L QY+  +EE+E
Sbjct: 181 CRGPHVPNTRFLKVF-KLTKLAGAYWRGDAKNEQLQRIYGTAWADKKQLDQYIQRIEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL +E+DLFHI E   GV+FWH KGW ++Q +  YMR   +D  Y E+  PQ+LD
Sbjct: 240 KRDHRKLGKELDLFHIDEVAPGVVFWHPKGWALWQAVEQYMRGIYRDTGYWEVKGPQILD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+++GHW +YR NMF       T  + R +ALKPMNCPGHV +F   L+SYR+LP+R
Sbjct: 300 KSLWEKTGHWQNYRDNMFT------TESEKREYALKPMNCPGHVLIFKSDLRSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
             EFG  +RNEPSG+LHG+MRVRGFTQDD H+FCT++Q+  EC+     +  +Y DFGF 
Sbjct: 354 YGEFGQCHRNEPSGALHGIMRVRGFTQDDGHIFCTEDQILEECVAYTAQLQKVYADFGFT 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
           +I+ K++TRP+ RVGSD LWD AE+ +   L       +  ++  +  G+GAFYGPK EY
Sbjct: 414 EILYKVATRPDNRVGSDELWDKAEHAVMEAL------RRSGVDFIISPGDGAFYGPKIEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            LKDA+GR WQCGT+QVDFN   R    YV   S + HPVM+HRA+ GS+ERFIG++IE+
Sbjct: 468 TLKDALGRQWQCGTMQVDFNTAERLGGEYVTETSGRAHPVMLHRAIVGSLERFIGMLIEH 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G LP WL+P+Q  V  I+    +YA  +A  L++  L ++ D  NE I YKIR+HS++
Sbjct: 528 HAGALPAWLAPVQVAVLNISEGQADYAASVAKTLQNQGLRVQLDLHNEKITYKIRKHSLQ 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K+P I++ GDKE    ++ +R  G+     +SL   +  L ++
Sbjct: 588 KLPYILVVGDKEREAGAVAVRARGNQDLGAMSLESFVQRLVQD 630


>gi|269798232|ref|YP_003312132.1| threonyl-tRNA synthetase [Veillonella parvula DSM 2008]
 gi|269094861|gb|ACZ24852.1| threonyl-tRNA synthetase [Veillonella parvula DSM 2008]
          Length = 636

 Score =  674 bits (1740), Expect = 0.0,   Method: Composition-based stats.
 Identities = 277/644 (43%), Positives = 408/644 (63%), Gaps = 16/644 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEI 61
           +D+K+  PDGS K +    T  +  + +S SLAKK +A  +NG++ DL + + +GS +  
Sbjct: 2   ADVKIILPDGSAKEYAAGTTLGEAVKQLSNSLAKKVLAANVNGELTDLREELVDGSEVAF 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +T ED      +RH+ +HI+A+AV+ +WPE ++AIGP I+ GFYYD D E   + ++L +
Sbjct: 62  LTFEDEGGKHTLRHTASHILAQAVKRLWPEAKLAIGPAIDKGFYYDIDMEHILTPEDLGK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK+M  I+  + P  K  +  ++A E F++K E YKVE+++ +P    ++ Y QG++ D
Sbjct: 122 IEKEMSRIVKENLPITKSVMPRQEAIEFFKAKNEDYKVELIQDLPEDAVISCYSQGDFID 181

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LC GPHV STG+VK F KL  +AGAYWRGD    ML RIYGTA+  ++EL  YL+ LEE+
Sbjct: 182 LCAGPHVASTGKVKAF-KLQSIAGAYWRGDEKNKMLQRIYGTAFEKKEELDAYLHMLEEA 240

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
            KRDHRKL +E+ LF I E+G G  F+  KG  +   L ++ R    + +YEEI TP +L
Sbjct: 241 AKRDHRKLGKELGLFVIKEEGPGFPFFLPKGMALRNELENFWREVHHEFEYEEIRTPIIL 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ LW+ SGHW  YR NM+       TI D   +A+KPMNCPG + V+ + + SYR+ P+
Sbjct: 301 NKQLWETSGHWFHYRENMYT------TIIDEEEYAIKPMNCPGGILVYQNEMHSYRDFPL 354

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R AE G V+R+E SG+LHGL RVR FTQDDAHVF    QM +E +K+  L   IY  FG 
Sbjct: 355 RYAELGLVHRHELSGALHGLFRVRAFTQDDAHVFMLPSQMQSELMKVIELFDRIYSQFGL 414

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           +   V+LST+P+  +G DA+W+ A   ++  ++         I   +  G+GAFYGPK +
Sbjct: 415 KYH-VELSTKPDNAMGDDAIWEAATEALRNAIEA------KGIPYVINPGDGAFYGPKLD 467

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           Y ++D++GR WQCGTIQ+D NLP RF   YV    +K  P+MIHRA FGS+ERFIGI+ E
Sbjct: 468 YHIEDSLGRTWQCGTIQLDMNLPERFQIEYVGEDGQKHRPIMIHRACFGSMERFIGILTE 527

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           ++ G  P W++P+Q  +  I+   VEYA+++A  +   ++ +E D R+E I YKIR+  +
Sbjct: 528 HYAGAFPTWMAPVQVKILPISEKHVEYAKDLAKQMHRDYVRVEVDDRSEKIGYKIRQAQM 587

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            K+P +++ GDKE  E ++ +R+ G      V   +    +  E
Sbjct: 588 AKVPYMLVVGDKEVEEGTVNVRKHGGDELGSVPFEEFFNSIKTE 631


>gi|322514773|ref|ZP_08067797.1| threonine--tRNA ligase [Actinobacillus ureae ATCC 25976]
 gi|322119269|gb|EFX91397.1| threonine--tRNA ligase [Actinobacillus ureae ATCC 25976]
          Length = 653

 Score =  674 bits (1740), Expect = 0.0,   Method: Composition-based stats.
 Identities = 296/655 (45%), Positives = 430/655 (65%), Gaps = 19/655 (2%)

Query: 3   SDIK---LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGS 58
            DIK   +T PDGS + F    +  +VA+SI   LAK  +A  +NG+  D  D +  + S
Sbjct: 7   KDIKMPIITLPDGSQRQFDNPVSVMEVAQSIGAGLAKATIAGRVNGERRDACDIISEDSS 66

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           +EIIT +D   L +IRHSCAH++  A++ ++P+V++AIGP I++GFYYD D ++  + ++
Sbjct: 67  LEIITAKDEDGLEIIRHSCAHLLGHAIKQLFPDVKMAIGPTIDNGFYYDVDLDRSLTQED 126

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQG 177
           L  IEK+M E+   +   +K+ +S + AR+ FE + E YK+ IL E+I       LY   
Sbjct: 127 LDAIEKRMLELAKTNYDVMKKRVSWQDARDTFEKRGEPYKMAILDENIERTAMPALYHHE 186

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           E+ D+CRGPHV +      F KL KVAGAYWRGDS   ML RIYGTAW  +++L +YL  
Sbjct: 187 EYIDMCRGPHVPNMRFCHHF-KLQKVAGAYWRGDSKNKMLQRIYGTAWADKKQLAEYLTR 245

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
           LEE+ KRDHR++ + +DL+H+ E+  G++FWH  GW IF+ L +++R K+K+ DY+E+  
Sbjct: 246 LEEAAKRDHRRIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKEYDYQEVKG 305

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P ++D+ LW+++GHW +Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR
Sbjct: 306 PFMMDRVLWERTGHWQNYADLMFT------TQSENREYAIKPMNCPGHVQIFNQGLKSYR 359

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +LP+R+AEFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+ +E      ++  IY 
Sbjct: 360 DLPIRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQIESEVTSCIKMVYDIYS 419

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
            FGF  I VKLSTRPE R+G DA+WD AE+ +   L        + ++  +  GEGAFYG
Sbjct: 420 TFGFSNIQVKLSTRPENRIGDDAMWDRAEDGLAKALTA------NGLSYEIQEGEGAFYG 473

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK E+ L+D + R+WQCGTIQ+DF LP R +A YV   + +  PVMIHRA+ GSIERFIG
Sbjct: 474 PKIEFALRDCLDREWQCGTIQLDFALPGRLDASYVAEDNGRRTPVMIHRAILGSIERFIG 533

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           I+ E + G  P WL+P QA+V  IT S  +Y Q++   L    +  ++D RNE + +K+R
Sbjct: 534 IITEEYAGFFPTWLAPTQAVVMNITDSQADYVQKVTKALSDAGIRAKSDLRNEKVGFKVR 593

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           EH+++++P +++CGDKE     + +R          ++ + + IL  +    + +
Sbjct: 594 EHTLRRVPYMLVCGDKEIEAGKVSVRTRKGADLGTFTIEEFVEILKNQVKARELK 648


>gi|313892956|ref|ZP_07826533.1| threonine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
 gi|313442309|gb|EFR60724.1| threonine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
          Length = 636

 Score =  674 bits (1740), Expect = 0.0,   Method: Composition-based stats.
 Identities = 280/644 (43%), Positives = 410/644 (63%), Gaps = 16/644 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEI 61
           +D+K+  PDGS K +    T  +  + +S SLAKK +A  +NG++ DL + + +GS +  
Sbjct: 2   ADVKIILPDGSAKEYAAGTTLGESVKQLSNSLAKKVLAANVNGELTDLREELVDGSEVAF 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +T E+      +RH+ +HI+A+AV+ +WPE ++AIGP I+ GFYYD D E   + ++L +
Sbjct: 62  LTFEEDGGKHTLRHTASHILAQAVKRLWPEAKLAIGPAIDKGFYYDIDMEHTLTPEDLGK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK+M  I+  + P  K  +S ++A E F+SK E YKVE+++ +P    ++ Y QG++ D
Sbjct: 122 IEKEMSRIVKENLPITKSVMSRQEAIEFFKSKNEDYKVELIQDLPEDAVISCYSQGDFID 181

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LC GPHV STG+VK F KL  +AGAYWRGD    ML RIYGTA+  ++EL  YL+ LEE+
Sbjct: 182 LCAGPHVASTGKVKAF-KLQSIAGAYWRGDEKNKMLQRIYGTAFEKKEELDAYLHLLEEA 240

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
            KRDHRKL +E+ LF I E+G G  F+  KG  +   L ++ R    + DYEEI TP +L
Sbjct: 241 AKRDHRKLGKELGLFVIKEEGPGFPFFLPKGMALRNELENFWREVHHEFDYEEIRTPIIL 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ LW+ SGHW  YR NM+       TI D   +A+KPMNCPG + V+ + + SYR+ P+
Sbjct: 301 NKQLWETSGHWFHYRENMYT------TIIDDEEYAIKPMNCPGGILVYQNEMHSYRDFPL 354

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R AE G V+R+E SG+LHGL RVR FTQDDAHVF   +QM +E +K+  L   IY  FG 
Sbjct: 355 RYAELGLVHRHELSGALHGLFRVRAFTQDDAHVFMLPDQMQSELMKVIELFDRIYSQFGL 414

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           +   V+LST+P+  +G DA+W+ A   ++  ++         I   +  G+GAFYGPK +
Sbjct: 415 KYH-VELSTKPDNAMGDDAIWEAATEALRNAIEA------KGIPYVINPGDGAFYGPKLD 467

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           Y ++D++GR WQCGTIQ+D NLP RF   YV    +K  P+MIHRA FGS+ERFIGI+ E
Sbjct: 468 YHIEDSLGRTWQCGTIQLDMNLPERFQIDYVGEDGQKHRPIMIHRACFGSMERFIGILTE 527

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           ++ G  P W++P+Q  +  I+   VEYA+E+A  +   ++ +E D R+E I YKIR+  +
Sbjct: 528 HYAGAFPTWMAPVQVKILPISEKHVEYAKELAKQMHRDYVRVEVDDRSEKIGYKIRQAQM 587

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            K+P +++ GDKE  E ++ +R+ G      V   +    +  E
Sbjct: 588 AKVPYMLVVGDKEVEEGTVNVRKHGGDELGSVPFEEFFNSIKIE 631


>gi|270261557|ref|ZP_06189830.1| threonyl-tRNA synthetase [Serratia odorifera 4Rx13]
 gi|270045041|gb|EFA18132.1| threonyl-tRNA synthetase [Serratia odorifera 4Rx13]
          Length = 642

 Score =  674 bits (1740), Expect = 0.0,   Method: Composition-based stats.
 Identities = 289/647 (44%), Positives = 427/647 (65%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS ++F    +  DVA  I   LAK  +A  +NG++ D  D +  +  +
Sbjct: 1   MPV---ITLPDGSQRHFDHAVSPLDVALDIGPGLAKACIAGRVNGELVDAGDLIESDAQL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L ++RHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D ++  + ++L
Sbjct: 58  AIITIKDAEGLEIMRHSCAHLLGHAIKQLWPDTKMAIGPVIDNGFYYDVDIDRTLTQEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M E+  +D   +K+ +S ++AR+ F ++ E YKV IL E+I   +   LY   E
Sbjct: 118 DLLEKRMHELADKDYDVIKKKVSWQEARDTFAARGENYKVAILDENISHDDRPGLYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KL K +GAYWRGDS   ML RIYGTAW  +++L  YL  L
Sbjct: 178 YVDMCRGPHVPNMRFCHHF-KLQKTSGAYWRGDSKNKMLQRIYGTAWADKKQLNAYLQRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF+ L +++R K+K+  Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEAFVRMKLKEYQYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW+++GHW++Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 297 FMMDRVLWEKTGHWENYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+ EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+  E  +   ++  +Y  
Sbjct: 351 LPLRMGEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQVRAEVNECIRMVYDVYGT 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI VKLSTRPEKR+G+D +W  AE  +   L      +++ I      GEGAFYGP
Sbjct: 411 FGFEKIAVKLSTRPEKRIGTDDMWTRAEEDLAAAL------TENGIPFEYQPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF LP R  A YV  ++++  PVMIHRA+ GS+ERFIGI
Sbjct: 465 KIEFTLHDCLDRAWQCGTVQLDFFLPGRLGASYVGENNDRVVPVMIHRAILGSMERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E + G  P W++P+Q +V  IT S  +Y Q++   L+   + ++ D RNE I +KIRE
Sbjct: 525 LTEEYAGFYPTWIAPVQVVVMNITDSQSDYVQQLTKKLQEAGIRVKADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H+++++P +++CGDKE     + +R         + + + +  L KE
Sbjct: 585 HTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSLDVNEVVDKLLKE 631


>gi|262374306|ref|ZP_06067582.1| threonyl-tRNA synthetase [Acinetobacter junii SH205]
 gi|262310864|gb|EEY91952.1| threonyl-tRNA synthetase [Acinetobacter junii SH205]
          Length = 640

 Score =  674 bits (1740), Expect = 0.0,   Method: Composition-based stats.
 Identities = 300/638 (47%), Positives = 429/638 (67%), Gaps = 15/638 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T P+G  K F    +  ++A+SI   LAK  VA  IN ++ D  D +  + +++IITP+
Sbjct: 4   ITLPNGDQKQFDHPISVMELAQSIGPGLAKNTVAGRINDRLVDACDLITEDATVQIITPK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  AV+ ++PE ++ IGP+IE+GFYYD    +PF+ D++A IE++
Sbjct: 64  DEEGLVIIRHSCAHLVGHAVKQLFPEAKMVIGPVIEEGFYYDIWMPRPFTLDDMAAIEER 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+++I +D   +K+    ++    F ++ E YK+ ++  +P +  + LY   ++ D+CRG
Sbjct: 124 MKKLIDQDYDVIKKMTPRDEVIAEFTARGEEYKLRLIADMPNETQMGLYYHQDYLDMCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +T  +K F KL K++GAYWRGD+    L RIYGTAW  +++L  Y+  +EE+EKRD
Sbjct: 184 PHVPNTKFLKSF-KLTKISGAYWRGDAKNEQLQRIYGTAWADKKQLAAYIKRIEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHL 304
           HRK+ + +DLFH+ E+  G++FWH  GW I+Q L  YMR+ +  + Y+EI TPQ++D  L
Sbjct: 243 HRKIGKALDLFHMQEEAPGMVFWHANGWTIYQVLEQYMRKVQQDNGYQEIKTPQIVDFTL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGH  +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYR+LP+RLAE
Sbjct: 303 WEKSGHAANYAENMFT------THSESRNYAVKPMNCPCHVQVFNQGLKSYRDLPIRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNEPSGSLHG+MRVRGFTQDDAH+FCTKEQ+  E      L + +YKDFGFE++ 
Sbjct: 357 FGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTKEQIGKEVADFIKLTLDVYKDFGFEEVQ 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +KLSTRPEKRVG DALWD AE  +   LD         +   +  GEGAFYGPK E+ LK
Sbjct: 417 MKLSTRPEKRVGDDALWDLAEKSLADALDDAG------LAWDLQPGEGAFYGPKIEFSLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D +GR WQCGTIQ DFNLP R +A YV   +E+  PVM+HRA+ GS ERFIGI+IE++ G
Sbjct: 471 DCLGRVWQCGTIQCDFNLPIRLDASYVTEENERDQPVMLHRAILGSFERFIGILIEHYAG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
            +P WL+P+QA V  IT S  E ++++   LK + L   +D RNE I +KIRE ++++IP
Sbjct: 531 FMPPWLAPVQACVMNITDSQAEASEQVVAKLKENGLRAISDLRNEKIGFKIRERTLERIP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +++ GD+E  E ++ +R         +S+   I ++ 
Sbjct: 591 YLLVLGDREVEEGTVNVRTRSGKNLGTMSVDAFIDLVK 628


>gi|238787089|ref|ZP_04630889.1| Threonyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
 gi|238724877|gb|EEQ16517.1| Threonyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
          Length = 642

 Score =  674 bits (1740), Expect = 0.0,   Method: Composition-based stats.
 Identities = 292/647 (45%), Positives = 429/647 (66%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS + +    +  DVA  I   LAK  +A  +NG++ D SD +  +  +
Sbjct: 1   MPV---ITLPDGSQRQYDHAVSVLDVALDIGPGLAKACIAGRVNGELVDASDLIESDAQL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L ++RHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D ++  + ++L
Sbjct: 58  AIITTKDAEGLEILRHSCAHLLGHAIKQLWPDTKMAIGPVIDNGFYYDVDIDRTLTQEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M E+  +D   +K+ +S ++AR+ F ++ E YKV IL E+I   +   LY   E
Sbjct: 118 DLLEKRMHELADKDYDVIKKKVSWQEARDTFAARGEDYKVAILDENISRDDRPGLYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KL K +GAYWRGDS   ML RIYGTAW  +++L  YL  L
Sbjct: 178 YVDMCRGPHVPNMRFCHHF-KLQKTSGAYWRGDSKNKMLQRIYGTAWGDKKQLNAYLQRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF+ L +++R K+K+  Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKEYQYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW+++GHW++Y  +MF       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 297 FMMDRVLWEKTGHWENYAEHMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSG+LHGLMRVRGFTQDDAHVFCT+EQ+ +E      ++  +Y  
Sbjct: 351 LPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHVFCTEEQVRDEVNSCIKMVYDMYST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI+VKLSTRPEKR+GSD LW  AE+ +   L      +++ I      GEGAFYGP
Sbjct: 411 FGFEKIVVKLSTRPEKRIGSDDLWTRAEDDLAAAL------TENGIPFDYQPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF+LP R +A Y+  ++++  PVMIHRA+ GS+ERFIGI
Sbjct: 465 KIEFTLHDCLDRAWQCGTVQLDFSLPGRLSASYIGENNDRQVPVMIHRAILGSMERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E + G  P WL+P+Q +V  IT S  +Y Q++   L+   +  + D RNE I +KIRE
Sbjct: 525 LTEEYAGFFPTWLAPVQVVVMNITDSQSDYVQQVTKKLQDAGIRAKADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H+++++P +++CGDKE     I +R         + +   +  L  E
Sbjct: 585 HTLRRVPYMLVCGDKEVESGKIAVRTRRGKDLGSLDVNVVVDQLLTE 631


>gi|238018994|ref|ZP_04599420.1| hypothetical protein VEIDISOL_00856 [Veillonella dispar ATCC 17748]
 gi|237864478|gb|EEP65768.1| hypothetical protein VEIDISOL_00856 [Veillonella dispar ATCC 17748]
          Length = 636

 Score =  674 bits (1740), Expect = 0.0,   Method: Composition-based stats.
 Identities = 280/644 (43%), Positives = 410/644 (63%), Gaps = 16/644 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEI 61
           +D+K+  PDGS K +    T  +  + +S SLAKK +A  +NG++ DL + + +GS +  
Sbjct: 2   ADVKIILPDGSAKEYAAGTTLGEAVKQLSNSLAKKVLAANVNGELTDLREELVDGSEVAF 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +T E+      +RH+ +HI+A+AV+ +WPE ++AIGP I+ GFYYD D E   + ++L +
Sbjct: 62  LTFEEDGGKHTLRHTASHILAQAVKRLWPEAKLAIGPAIDKGFYYDIDMEHTLTPEDLGK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK+M  I+  + P  K  +S ++A E F+SK E YKVE++E +P    ++ Y QG++ D
Sbjct: 122 IEKEMSRIVKENLPITKSVMSRQEAIEFFKSKNEDYKVELIEDLPEDAVISCYAQGDFID 181

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LC GPHV STG+VK F KL  +AGAYWRGD    ML RIYGTA+  ++EL  YL+ LEE+
Sbjct: 182 LCAGPHVASTGKVKAF-KLQSIAGAYWRGDEKNKMLQRIYGTAFEKKEELDAYLHLLEEA 240

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
            KRDHRKL +E+ LF I E+G G  F+  KG  +   L ++ R    + DYEEI TP +L
Sbjct: 241 AKRDHRKLGKELGLFVIKEEGPGFPFFLPKGMALRNELENFWREVHHEFDYEEIRTPIIL 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ LW+ SGHW  YR NM+       TI D   +A+KPMNCPG + V+ + + SYR+ P+
Sbjct: 301 NKQLWETSGHWFHYRENMYT------TIIDDEEYAIKPMNCPGGILVYQNEMHSYRDFPL 354

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R AE G V+R+E SG+LHGL RVR FTQDDAHVF   +QM +E +K+  L   IY  FG 
Sbjct: 355 RYAELGLVHRHELSGALHGLFRVRAFTQDDAHVFMLPDQMQSELMKVIELFDRIYSQFGL 414

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           +   V+LST+P+  +G DA+W+ A   ++  ++         I   +  G+GAFYGPK +
Sbjct: 415 KYH-VELSTKPDNAMGDDAIWEAATEALRNAIEA------KGIPYVINPGDGAFYGPKLD 467

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           Y ++D++GR WQCGTIQ+D NLP RF   YV    +K  P+MIHRA FGS+ERFIGI+ E
Sbjct: 468 YHIEDSLGRTWQCGTIQLDMNLPERFQIEYVGEDGQKHRPIMIHRACFGSMERFIGILTE 527

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           ++ G  P W++P+Q  +  I+   VEYA+E+A  +   ++ +E D R+E I YKIR+  +
Sbjct: 528 HYAGAFPTWMAPVQVKILPISEKHVEYAKELAKQMHRDYVRVEVDDRSEKIGYKIRQAQM 587

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            K+P +++ GDKE  E ++ +R+ G      +   +    +  E
Sbjct: 588 AKVPYMLVVGDKEVEEGTVNVRKHGGDELGSIPFDEFFNSIKIE 631


>gi|253998429|ref|YP_003050492.1| threonyl-tRNA synthetase [Methylovorus sp. SIP3-4]
 gi|313200504|ref|YP_004039162.1| threonyl-tRNA synthetase [Methylovorus sp. MP688]
 gi|253985108|gb|ACT49965.1| threonyl-tRNA synthetase [Methylovorus sp. SIP3-4]
 gi|312439820|gb|ADQ83926.1| threonyl-tRNA synthetase [Methylovorus sp. MP688]
          Length = 640

 Score =  674 bits (1740), Expect = 0.0,   Method: Composition-based stats.
 Identities = 319/651 (49%), Positives = 442/651 (67%), Gaps = 23/651 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAIN--GK---VCDLSDPV- 54
           MP    +  PDGS + F    T + VA+SI   LA+ A+A  +   G+   + D S  + 
Sbjct: 1   MPV---IRLPDGSERQFDAPLTVAAVAQSIGAGLARAALAGKVTLPGQEPRLVDTSFEIA 57

Query: 55  REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPF 114
            +  + IIT +D   L VIRHS AH++A AV+ ++PE QV IGP+I++GFYYDF  ++PF
Sbjct: 58  EDVDLAIITDKDADGLEVIRHSTAHLLAYAVKELFPEAQVTIGPVIDNGFYYDFSYKRPF 117

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
           + ++L  IEKKM E+  +D    ++ L  ++A   F+S  EAYK EI+ SIPA ++V+LY
Sbjct: 118 TPEDLEAIEKKMAELAKKDEQVTRKVLPRDEAVAYFQSIGEAYKAEIIASIPADQDVSLY 177

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
            +G + DLCRGPHV STG++K F KLMKVAGAYWRGDSN  ML RIYGTAW  +++L  Y
Sbjct: 178 TEGNFTDLCRGPHVPSTGKLKAF-KLMKVAGAYWRGDSNNEMLQRIYGTAWAKKEDLEAY 236

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEE 293
           L+ LEE+EKRDHRKL +++D FH+ ++  G++FWH +GW ++Q +  YMR    +  Y+E
Sbjct: 237 LHMLEEAEKRDHRKLGKQLDYFHMQDEAPGMVFWHPRGWNLWQEVEQYMRGLFRQYGYQE 296

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           + TP ++D+ LW++SGHW +YR NMF       T  + R +A+KPMNCPGH+ +FN GL 
Sbjct: 297 VKTPTIMDRSLWEKSGHWQNYRENMFT------TSSENRDYAVKPMNCPGHIQIFNSGLH 350

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYR+LP+RLAEFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT++Q+  E      ++  
Sbjct: 351 SYRDLPLRLAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEDQVKQEVADFIVMLYQ 410

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
            YKDFGF  ++VKLSTRPEKRVGSD  WD AE  +   L       ++ +   +  GEGA
Sbjct: 411 AYKDFGFNDVLVKLSTRPEKRVGSDETWDKAEASLAAAL------RENNLAFDLQPGEGA 464

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK E+ LKD++GR WQCGTIQ+DFNLP R  A YV   + + HPVM+HRA+ GS+ER
Sbjct: 465 FYGPKIEFTLKDSLGRLWQCGTIQLDFNLPERLGAEYVAEDNTRKHPVMLHRAIVGSMER 524

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           F+GI+IEN+ G +P WL+P+QA+V  IT S   Y QE+   L+ +   +++D RNE I Y
Sbjct: 525 FLGILIENYAGAMPTWLAPVQAMVLNITDSQSAYVQEVVAELRKNGFRVDSDLRNEKITY 584

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIREHS++K+P +++ GD+E     + +R         +S+   I  L  +
Sbjct: 585 KIREHSLQKLPYLLVAGDREMQSGQVAVRTRKGEDLGSMSVSAFIERLKAD 635


>gi|194366578|ref|YP_002029188.1| threonyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3]
 gi|238693469|sp|B4SQH4|SYT_STRM5 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|194349382|gb|ACF52505.1| threonyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3]
          Length = 633

 Score =  674 bits (1739), Expect = 0.0,   Method: Composition-based stats.
 Identities = 291/644 (45%), Positives = 424/644 (65%), Gaps = 16/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +T PDGS + F    +  DVA+SI   LAK  +A +++G + D SD +  + S+ II
Sbjct: 1   MINITLPDGSRREFENPVSVMDVAQSIGAGLAKATIAGSVDGVLVDASDVIDHDASLRII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   + +IRHS AH++  AV+ ++P+V++ IGP+I +GFYYD   E+PF+ +++A I
Sbjct: 61  TAKDEEGVEIIRHSSAHLVGHAVKQLYPDVKMVIGPVIAEGFYYDIYSERPFTPEDMAAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-ENVTLYRQGEWFD 181
           EK+M E+IA+D   +K+     +  E+F+++ E YK+ ++E +    + + +Y   E+ D
Sbjct: 121 EKRMGELIAQDYDVIKKVTPRAEVIEIFKARGEDYKLRLIEDMSDDIQAMGMYYHQEYVD 180

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           +CRGPHV +T  +K F KL +++GAYWRGD+    L RIYGTAW  +++L  Y+  +EE+
Sbjct: 181 MCRGPHVPNTRFLKAF-KLTRISGAYWRGDAQNEQLQRIYGTAWADKKQLEAYIKRIEEA 239

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
           E RDHR++ ++ DLFH+ E+  G++FWH KGW ++Q +  YMR+  +   Y E+  PQ+L
Sbjct: 240 EMRDHRRIGKQQDLFHLQEEAPGLVFWHPKGWALWQVVEQYMRKVYRKTGYGEVRCPQIL 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D  LWQ+SGHWD+Y+  MF       T  + RT+ALKPMNCPGHV VFN GL SYR+LP+
Sbjct: 300 DVSLWQKSGHWDNYQDAMFF------TESEKRTYALKPMNCPGHVQVFNQGLHSYRDLPI 353

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R  EFG+ +RNEPSG+LHG++RVRGFTQDD HVFCT+ Q+  E    H   +++Y+ FGF
Sbjct: 354 RYGEFGACHRNEPSGALHGILRVRGFTQDDGHVFCTENQVEAEVTAFHQQALAVYQHFGF 413

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           ++I VK++ RPE R+G DA WD AE  ++  L      S + +    L GEGAFYGPK E
Sbjct: 414 DEIQVKIALRPESRLGDDATWDKAEGALRSAL------SSNGVEWQELPGEGAFYGPKIE 467

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           Y LKDAIGR WQ GT+QVDF +P R  A YV+ +S+K HPVM+HRA+ GS+ERF+GI+IE
Sbjct: 468 YHLKDAIGRTWQLGTMQVDFMMPGRLGAEYVDENSQKKHPVMLHRAIVGSMERFLGILIE 527

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +  G  P WL+P Q +V  IT +  EY  ++   L      +  D RNE I YKIREH++
Sbjct: 528 HHAGQFPAWLAPTQVVVANITDAQAEYVSDVTKTLADQGFRVSADLRNEKIGYKIREHTL 587

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +++P +++ GD+E    ++ +R         +SL   I  L  E
Sbjct: 588 QRVPYLLVIGDREKENGAVAVRTRSGEDLGSMSLQAFIERLQAE 631


>gi|330810593|ref|YP_004355055.1| Threonine--tRNA ligase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327378701|gb|AEA70051.1| Threonine--tRNA ligase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 640

 Score =  674 bits (1739), Expect = 0.0,   Method: Composition-based stats.
 Identities = 294/656 (44%), Positives = 433/656 (66%), Gaps = 21/656 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP    +T PDGS ++F    + ++VA SI   LAK  +A  +NGK+ D SD +  + ++
Sbjct: 1   MP---TITLPDGSQRSFDHPVSVAEVAASIGAGLAKATLAGKVNGKLVDASDVIDSDATL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           +IITP+D   L +IRHSCAH++  AV+ ++P  ++ IGP+I++GFYYD   E+PF+ +++
Sbjct: 58  QIITPKDEEGLEIIRHSCAHLVGHAVKQLYPSAKMVIGPVIDEGFYYDIAFERPFTPEDM 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A IE++MQ++I +D   +K+     +  E+F+++ E YK+ ++E +P ++ + LY   E+
Sbjct: 118 AAIEQRMQQLIEKDYDVIKKVTPRAEVIEVFKARGEDYKLRLVEDMPDEQAMGLYYHEEY 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            D+CRGPHV +T  +K F KL K++GAYWRGD+    L R+YGTAW  +++L  Y+  +E
Sbjct: 178 VDMCRGPHVPNTRFLKSF-KLTKLSGAYWRGDAKNEQLQRVYGTAWADKKQLAAYIQRIE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+EKRDHRK+ + + LFH  E+  G++FWH  GW ++Q L  YMR+ + ++ Y EI TPQ
Sbjct: 237 EAEKRDHRKIGKRLGLFHTQEESPGMVFWHPNGWTLYQVLEQYMRQVQRENGYLEIKTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHW +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYREL
Sbjct: 297 VVDRSLWEKSGHWANYADNMFT------TQSENRDYAIKPMNCPCHVQVFNQGLKSYREL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFG+ +RNEPSG+LHG+MRVR FTQDDAH+FCT+EQM  E      L + +Y+DF
Sbjct: 351 PMRLAEFGACHRNEPSGALHGIMRVRAFTQDDAHIFCTEEQMQAESAAFIKLTMDVYRDF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF ++ +KLSTRPEKRVGSD LWD      +             +   +  GEGAFYGPK
Sbjct: 411 GFTEVEMKLSTRPEKRVGSDELWD------RAEAALAAALDSAGLAYDLQPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD +GR WQCGT+Q+DFNLP R  A YV+  + + HPVM+HRA+ GS ERF+GI+
Sbjct: 465 IEFSLKDCLGRVWQCGTLQLDFNLPIRLGAEYVSEDNSRKHPVMLHRAILGSFERFVGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+++G  P WL+P QA++  IT    ++A E+   L       ++D RNE I +KIREH
Sbjct: 525 IEHYEGAFPAWLAPTQAVIMNITDKQADFAAEVEKTLNQSGFRAKSDLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK---ESLPPDCQ 651
           ++ K+P +++ GD+E   +++ +R         + + +    L +       PD +
Sbjct: 585 TLLKVPFLLVIGDREVEMQTVAVRTREGADLGSMPVAEFAEFLAQAVSRRGRPDLE 640


>gi|260682273|ref|YP_003213558.1| threonyl-tRNA synthetase [Clostridium difficile CD196]
 gi|260685872|ref|YP_003217005.1| threonyl-tRNA synthetase [Clostridium difficile R20291]
 gi|260208436|emb|CBA60998.1| threonyl-tRNA synthetase [Clostridium difficile CD196]
 gi|260211888|emb|CBE02332.1| threonyl-tRNA synthetase [Clostridium difficile R20291]
          Length = 670

 Score =  674 bits (1739), Expect = 0.0,   Method: Composition-based stats.
 Identities = 279/644 (43%), Positives = 405/644 (62%), Gaps = 16/644 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
           + IK+   DGSIK F    +  DVA+SIS  LA+  VA ++NG+V  L   +  +  + +
Sbjct: 31  TMIKVALKDGSIKEFENAISVMDVAKSISEGLARNVVAASVNGEVVGLDHIIDTDCDLNL 90

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
              ED     V RH+ AHI+A+A++ ++PE ++AIGP IE+GFYYD D +     ++L +
Sbjct: 91  FKFEDKEGKEVFRHTSAHILAQAIKRLYPEAKLAIGPSIENGFYYDIDLDHRLVPEDLEK 150

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE +M++I   D    +  L   +A EL + + E YKVE++  +P  E ++ Y+QG++ D
Sbjct: 151 IEAEMKKIAKEDLKIERFELPRNEALELMKEQGEDYKVELISDLPESEIISFYKQGDFTD 210

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ ST +VK   KL  VAGAYWRGD N  ML RIYGT++   ++L +YL+ LEE+
Sbjct: 211 LCRGPHLPSTKKVK-AVKLQSVAGAYWRGDENNKMLQRIYGTSFEKNKDLEEYLHLLEEA 269

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           +KRDHRKL +E+ LF I E+G G   +  KG ++   L+ + R    K  Y EI +P +L
Sbjct: 270 KKRDHRKLGKELGLFMIPEEGPGFPMFLPKGMELKNELLKFWREIHRKAGYIEIESPIIL 329

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ LW+ SGHW  Y+ NM+ VK       D   +A+KPMNCPG +  +N  L SYR+ P+
Sbjct: 330 NRKLWETSGHWYHYKENMYTVKI------DDEDYAIKPMNCPGGLIYYNSQLHSYRDFPM 383

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G V+R+E SG+L GLMRVR FTQDD+H+F   EQ+ +E   + NLI  IYK FGF
Sbjct: 384 RVAELGRVHRHELSGALQGLMRVRAFTQDDSHIFMLPEQIKDEIKGVANLIDGIYKTFGF 443

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           E  + +LSTRPE  +GSD  W+ AEN ++  L+ +       +   +  G+GAFYGPK +
Sbjct: 444 EYNL-ELSTRPENSMGSDEEWEAAENGLREALEELG------LPYTINEGDGAFYGPKID 496

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           + LKD +GR WQCGTIQ+D  LP +F+  Y+    EK  PVMIHR  FGSIERFIGI+IE
Sbjct: 497 FHLKDCLGRTWQCGTIQLDMQLPRQFDNTYIGQDGEKHRPVMIHRVAFGSIERFIGILIE 556

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           ++ G  P+WLSP Q  +  I+   ++YA E+   L    + +E D R E I +KIRE  +
Sbjct: 557 HYAGKFPVWLSPTQVKILPISDKFMDYANEVKKELFDKGIRVELDDRAEKIGFKIREAQL 616

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +K+P ++I G+KE ++ ++ +R         + L + I  ++KE
Sbjct: 617 EKVPYMLIVGEKEVADNNVSVRSRDKGEIGSIKLDEFIASISKE 660


>gi|255305562|ref|ZP_05349734.1| threonyl-tRNA synthetase [Clostridium difficile ATCC 43255]
          Length = 639

 Score =  674 bits (1739), Expect = 0.0,   Method: Composition-based stats.
 Identities = 279/643 (43%), Positives = 403/643 (62%), Gaps = 16/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+   DGSIK F    +  DVA+SIS  LA+  VA ++NG+V  L   +  +  + + 
Sbjct: 1   MIKVALKDGSIKEFENAISVMDVAKSISEGLARNVVAASVNGEVVGLDHIIDTDCDLNLF 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
             ED     V RH+ AHI+A+A++ ++PE ++AIGP IE+GFYYD D +     ++L +I
Sbjct: 61  KFEDKEGKEVFRHTSAHILAQAIKRLYPEAKLAIGPSIENGFYYDIDLDHRLVPEDLEKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M++I   D    +  L   +A EL   + E YKVE++  +P  E ++ Y+QG++ DL
Sbjct: 121 EAEMKKIAKEDLKIERFELPRNEALELMREQGEDYKVELISDLPESEIISFYKQGDFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ ST +VK   KL  VAGAYWRGD N  ML RIYGT++   ++L +YL+ LEE++
Sbjct: 181 CRGPHLPSTKKVK-AVKLQSVAGAYWRGDENNKMLQRIYGTSFEKNKDLEEYLHLLEEAK 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KRDHRKL +E+ LF I E+G G   +  KG ++   L+ + R    K  Y EI +P +L+
Sbjct: 240 KRDHRKLGKELGLFMIPEEGPGFPMFLPKGMELKNELLKFWREIHRKAGYIEIESPIILN 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW  Y+ NM+ VK       D   +A+KPMNCPG +  +N  L SYR+ P+R
Sbjct: 300 RKLWETSGHWYHYKENMYTVKI------DDEDYAIKPMNCPGGLIYYNSQLHSYRDFPMR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AE G V+R+E SG+L GLMRVR FTQDD+H+F   EQ+ +E   + NLI  IYK FGFE
Sbjct: 354 VAELGRVHRHELSGALQGLMRVRAFTQDDSHIFMLPEQIKDEIKGVANLIDGIYKTFGFE 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
             + +LSTRPE  +GSD  W+ AEN ++  L+ +       +   +  G+GAFYGPK ++
Sbjct: 414 YNL-ELSTRPENSMGSDEEWEAAENGLREALEELG------LPYTINEGDGAFYGPKIDF 466

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            LKD +GR WQCGTIQ+D  LP +F+  Y+    EK  PVMIHR  FGSIERFIGI+IE+
Sbjct: 467 HLKDCLGRTWQCGTIQLDMQLPRQFDNTYIGQDGEKHRPVMIHRVAFGSIERFIGILIEH 526

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  P+WLSP Q  +  I+   ++YA E+   L    + +E D R E I +KIRE  ++
Sbjct: 527 YAGKFPVWLSPTQVKILPISDKFMDYANEVKKELFDKGIRVELDDRAEKIGFKIREAQLE 586

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K+P ++I G+KE ++ ++ +R         + L + I  ++KE
Sbjct: 587 KVPYMLIVGEKEVADNNVSVRSRDKGEIGSIKLDEFIASISKE 629


>gi|296282100|ref|ZP_06860098.1| threonyl-tRNA synthetase [Citromicrobium bathyomarinum JL354]
          Length = 669

 Score =  674 bits (1739), Expect = 0.0,   Method: Composition-based stats.
 Identities = 311/665 (46%), Positives = 437/665 (65%), Gaps = 17/665 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           M   +K++ PDGS++  P  +T +DVA +I   LAK A+A  +NG++ D++ P   +  +
Sbjct: 1   MTELLKISLPDGSVREMPEGSTPADVAAAIGPGLAKAAIAARVNGELRDITRPFEGDAQL 60

Query: 60  EIITPED-PRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF---DKEQPFS 115
            ++T +D   +L + RH  AH++AEAVQ+++P  Q+  GP  +DGFYYDF   +    F+
Sbjct: 61  ALVTSKDVDEALELARHDYAHVLAEAVQNLFPGTQITFGPATDDGFYYDFAPAEGRGAFT 120

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            ++L +IE++M+ IIA D+P  ++  + ++  + F+   E++K E    +P  E +T+YR
Sbjct: 121 EEDLPKIEEEMRRIIAADTPLEREVWTRQQLIQWFKDHGESFKAEWAAELPEGEELTIYR 180

Query: 176 QGEWFDLCRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
           QG+W D+CRGPH+ STG++  + FKL +V+GAYWRGD    MLSRIYGT W  +++L ++
Sbjct: 181 QGDWLDMCRGPHLASTGKLDPQAFKLTRVSGAYWRGDQKNAMLSRIYGTGWLNKKQLNEH 240

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEE 293
           L+ LEE+ KRDHRKL REMDLFH+ E+  G +FWH +G+KI++ L SYMRRK+    Y E
Sbjct: 241 LHRLEEAAKRDHRKLGREMDLFHLQEEAHGSVFWHPQGYKIWRQLESYMRRKMDGAGYRE 300

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT--------FALKPMNCPGHV 345
           I TPQV+D   W+QSGHW  YR NMF +       +D            ALKPMNCP HV
Sbjct: 301 IKTPQVMDARQWEQSGHWGKYRENMFVIPDEVPNTEDEGELVSKDADWMALKPMNCPAHV 360

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            VF  G+ SYRELP+RL E G  +RNEP G+LHGLMRVR FTQDDAH+FCT++Q+  E  
Sbjct: 361 LVFKQGITSYRELPIRLGEMGCCHRNEPHGALHGLMRVRQFTQDDAHIFCTEKQVVEEVR 420

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
               L  ++Y+DFGF+  + KL+ RPE+R GSDA WD AE  ++  +      + +    
Sbjct: 421 AFIELADAVYRDFGFKYAI-KLALRPEQRFGSDADWDKAEQELRDAVAEAGMMNDEY-GW 478

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
             L GEGAFY PK E+ L DAIGR WQ GTIQ D  LP R +A Y+    EK  PVM+HR
Sbjct: 479 EELPGEGAFYAPKLEWHLTDAIGRTWQVGTIQGDRVLPERLDASYIGEDGEKHRPVMLHR 538

Query: 526 AVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD 585
           A+FGS ERFIGI+IE+F G LP+WL+P QA+V TI S A +YA E    L++  +  E+D
Sbjct: 539 AIFGSYERFIGILIEHFAGKLPVWLAPTQAVVATIVSDADDYASEALAKLRAAGIRAESD 598

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
            RNE INYK+REHS+ K+P +++ G +EA E ++ +R  G    + +SL +AI +L   +
Sbjct: 599 LRNEKINYKVREHSLAKVPHLLVVGKREAEEGTVAVRTLGEREQRVMSLDEAIAMLRDGA 658

Query: 646 LPPDC 650
            PPD 
Sbjct: 659 TPPDL 663


>gi|22125796|ref|NP_669219.1| threonyl-tRNA synthetase [Yersinia pestis KIM 10]
 gi|45442011|ref|NP_993550.1| threonyl-tRNA synthetase [Yersinia pestis biovar Microtus str.
           91001]
 gi|51596666|ref|YP_070857.1| threonyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
 gi|108807773|ref|YP_651689.1| threonyl-tRNA synthetase [Yersinia pestis Antiqua]
 gi|108812050|ref|YP_647817.1| threonyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|145598020|ref|YP_001162096.1| threonyl-tRNA synthetase [Yersinia pestis Pestoides F]
 gi|149365658|ref|ZP_01887693.1| threonyl-tRNA synthetase [Yersinia pestis CA88-4125]
 gi|153950233|ref|YP_001400689.1| threonyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
 gi|162420291|ref|YP_001607032.1| threonyl-tRNA synthetase [Yersinia pestis Angola]
 gi|165927513|ref|ZP_02223345.1| threonyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165939479|ref|ZP_02228025.1| threonyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|166011794|ref|ZP_02232692.1| threonyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166210452|ref|ZP_02236487.1| threonyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167400748|ref|ZP_02306254.1| threonyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167424849|ref|ZP_02316602.1| threonyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|170024059|ref|YP_001720564.1| threonyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
 gi|186895722|ref|YP_001872834.1| threonyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
 gi|218929522|ref|YP_002347397.1| threonyl-tRNA synthetase [Yersinia pestis CO92]
 gi|229837960|ref|ZP_04458119.1| threonyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229895121|ref|ZP_04510297.1| threonyl-tRNA synthetase [Yersinia pestis Pestoides A]
 gi|229898521|ref|ZP_04513666.1| threonyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229902362|ref|ZP_04517482.1| threonyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|270490458|ref|ZP_06207532.1| threonine--tRNA ligase [Yersinia pestis KIM D27]
 gi|294503566|ref|YP_003567628.1| threonyl-tRNA synthetase [Yersinia pestis Z176003]
 gi|22654122|sp|Q8ZDW5|SYT_YERPE RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|73919846|sp|Q669Z0|SYT_YERPS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|122979581|sp|Q1C728|SYT_YERPA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|122980145|sp|Q1CIG3|SYT_YERPN RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|166225518|sp|A4TIL1|SYT_YERPP RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|166987327|sp|A7FHG1|SYT_YERP3 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|238687259|sp|A9R0A8|SYT_YERPG RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|238688418|sp|B1JJ17|SYT_YERPY RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|238691408|sp|B2K668|SYT_YERPB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|21958722|gb|AAM85470.1|AE013793_6 threonine tRNA synthetase [Yersinia pestis KIM 10]
 gi|45436874|gb|AAS62427.1| threonyl-tRNA synthetase [Yersinia pestis biovar Microtus str.
           91001]
 gi|51589948|emb|CAH21580.1| threonyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
 gi|108775698|gb|ABG18217.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Yersinia pestis
           Nepal516]
 gi|108779686|gb|ABG13744.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Yersinia pestis
           Antiqua]
 gi|115348133|emb|CAL21061.1| threonyl-tRNA synthetase [Yersinia pestis CO92]
 gi|145209716|gb|ABP39123.1| threonyl-tRNA synthetase [Yersinia pestis Pestoides F]
 gi|149292071|gb|EDM42145.1| threonyl-tRNA synthetase [Yersinia pestis CA88-4125]
 gi|152961728|gb|ABS49189.1| threonyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
 gi|162353106|gb|ABX87054.1| threonyl-tRNA synthetase [Yersinia pestis Angola]
 gi|165912528|gb|EDR31159.1| threonyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|165920568|gb|EDR37845.1| threonyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165989259|gb|EDR41560.1| threonyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166207632|gb|EDR52112.1| threonyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167049601|gb|EDR61009.1| threonyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167056036|gb|EDR65814.1| threonyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|169750593|gb|ACA68111.1| threonyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
 gi|186698748|gb|ACC89377.1| threonyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
 gi|229680697|gb|EEO76793.1| threonyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|229688069|gb|EEO80140.1| threonyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229694326|gb|EEO84373.1| threonyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229701883|gb|EEO89906.1| threonyl-tRNA synthetase [Yersinia pestis Pestoides A]
 gi|262361608|gb|ACY58329.1| threonyl-tRNA synthetase [Yersinia pestis D106004]
 gi|262365651|gb|ACY62208.1| threonyl-tRNA synthetase [Yersinia pestis D182038]
 gi|270338962|gb|EFA49739.1| threonine--tRNA ligase [Yersinia pestis KIM D27]
 gi|294354025|gb|ADE64366.1| threonyl-tRNA synthetase [Yersinia pestis Z176003]
 gi|320015090|gb|ADV98661.1| threonyl-tRNA synthetase [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 642

 Score =  674 bits (1739), Expect = 0.0,   Method: Composition-based stats.
 Identities = 294/647 (45%), Positives = 430/647 (66%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D SD +  +  +
Sbjct: 1   MPV---ITLPDGSQRHYDHAVSVLDVALDIGPGLAKACIAGRVNGELVDASDLIESDAQL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L ++RHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D E   + ++L
Sbjct: 58  AIITAKDAEGLEILRHSCAHLLGHAIKQLWPDTKMAIGPVIDNGFYYDVDIEHTLTQEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
           A +EK+M E+  +D   +K+ +S ++AR+ F ++ E YKV IL E+I   +   LY   E
Sbjct: 118 ALLEKRMHELADKDYDVIKKKVSWQEARDTFAARGEDYKVAILDENISRDDRPGLYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KL K +GAYWRGDS   ML RIYGTAW  +++L  YL  L
Sbjct: 178 YVDMCRGPHVPNMRFCHHF-KLQKTSGAYWRGDSKNKMLQRIYGTAWGDKKQLNAYLQRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF+ L +++R K+K+  Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELETFVRMKLKEYQYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW+++GHW++Y  +MF       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 297 FMMDRVLWEKTGHWENYAEHMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSG+LHGLMRVRGFTQDDAHVFCT+EQ+ +E      ++  +Y  
Sbjct: 351 LPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHVFCTEEQVRDEVNSCIKMVYDMYST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI+VKLSTRPEKR+GSD LW  AE+ +   L      +++ I      GEGAFYGP
Sbjct: 411 FGFEKIVVKLSTRPEKRIGSDELWTRAEDDLAAAL------TENGIPFDYQPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF+LP R +A Y+  ++++  PVMIHRA+ GS+ERFIGI
Sbjct: 465 KIEFTLHDCLDRAWQCGTVQLDFSLPGRLSASYIGENNDRQVPVMIHRAILGSMERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E + G  P WL+P+Q +V  IT S  +Y Q++   L+   +  + D RNE I +KIRE
Sbjct: 525 LTEEYAGFFPTWLAPVQVVVMNITDSQSDYVQQVTKKLQDAGIRAKADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H+++++P +++CGDKE     I +R         + +   +  L  E
Sbjct: 585 HTLRRVPYMLVCGDKEVESGKIAVRTRRGKDLGSLDVNVVVDQLLAE 631


>gi|319763197|ref|YP_004127134.1| threonyl-tRNA synthetase [Alicycliphilus denitrificans BC]
 gi|330825391|ref|YP_004388694.1| threonyl-tRNA synthetase [Alicycliphilus denitrificans K601]
 gi|317117758|gb|ADV00247.1| threonyl-tRNA synthetase [Alicycliphilus denitrificans BC]
 gi|329310763|gb|AEB85178.1| threonyl-tRNA synthetase [Alicycliphilus denitrificans K601]
          Length = 639

 Score =  674 bits (1739), Expect = 0.0,   Method: Composition-based stats.
 Identities = 325/647 (50%), Positives = 445/647 (68%), Gaps = 19/647 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEII 62
            +++T PDGS + FP   T +DVA SI   LAK A+A  I  KV D S  + + S + I+
Sbjct: 1   MLQITLPDGSRREFPGPVTVADVAASIGSGLAKAALAGKIGDKVVDTSYRITQDSPLSIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +DP  L VIRHS AH++A AV+ ++P+ QV IGP+IE+GFYYDF  ++PF+ ++L  I
Sbjct: 61  TAKDPEGLEVIRHSTAHLLAYAVKELFPDAQVTIGPVIENGFYYDFAYKRPFTPEDLVAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M E+ A+D P +++ L  ++A   F+   E YK EI+ SIP+ E+V+LYR+G + DL
Sbjct: 121 EKRMMELAAKDEPVVRRVLPRDEAVAYFKGLGEHYKAEIIASIPSNEDVSLYREGGFEDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG++K FFKLMKVAGAYWRGD    ML R+YGTAW T+ EL QYL+ LEE+E
Sbjct: 181 CRGPHVPSTGKLK-FFKLMKVAGAYWRGDHRNEMLQRVYGTAWATKDELNQYLHMLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD 301
           KRDHR+L RE+DLFHI E   G +FWH KGW ++Q +  YMRR  + + Y+E+  PQ+LD
Sbjct: 240 KRDHRRLGRELDLFHIDEHSPGTVFWHPKGWTLWQEVEQYMRRVYRDNGYQEVKAPQILD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+++GHWD YR NMF       T  + R +ALKPMNCPGH+ +F  G+KSYR+LP+R
Sbjct: 300 KSLWEKTGHWDKYRENMFV------TESEKRDYALKPMNCPGHILIFKQGIKSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
             EFG  +RNEP+G LHG+MRVRGFTQDD H+FCT++Q+ +E L    L+  +Y+DFGF 
Sbjct: 354 YGEFGQCHRNEPTGGLHGIMRVRGFTQDDGHIFCTEDQIQHEVLAFTRLLQRVYQDFGFT 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            I+ K++TRP+ R+GSD +WD AE  +   L           +  +  GEGAFYGPK EY
Sbjct: 414 DIVYKVATRPDARIGSDEIWDKAEAALIESLKASGC------DFEISPGEGAFYGPKIEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            LKDAIGR WQCGTIQVDF++P R +A YV     +  PVM+HRA+ GS+ERFIGI+IE 
Sbjct: 468 TLKDAIGRHWQCGTIQVDFSMPERLDAEYVGEDGGRHRPVMLHRAIVGSLERFIGILIEQ 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSH----HLSIETDFRNETINYKIRE 597
             G LP+WL+P+Q  V  IT +  +Y +EIA  L+       L +  D RNE I YKIRE
Sbjct: 528 HAGALPVWLAPVQVAVLNITDAQSDYCREIAAKLQKALPHQDLRVVQDLRNEKITYKIRE 587

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H+++K+P I++ GDKE +  ++ +R  G+     +SL   + ++ ++
Sbjct: 588 HALQKLPYILVAGDKEKAAGAVAVRARGNKDLGVMSLDAFVELIARD 634


>gi|85705178|ref|ZP_01036278.1| threonyl-tRNA synthetase [Roseovarius sp. 217]
 gi|85670500|gb|EAQ25361.1| threonyl-tRNA synthetase [Roseovarius sp. 217]
          Length = 648

 Score =  674 bits (1739), Expect = 0.0,   Method: Composition-based stats.
 Identities = 320/652 (49%), Positives = 433/652 (66%), Gaps = 10/652 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
           + I LTFPDG+ +++    T ++VA SIS SLAK+ ++  ++    DL  P+ R+ ++ +
Sbjct: 2   AQISLTFPDGNTRSYDKGVTPAEVAASISPSLAKRTISAYVDDAHWDLQWPIDRDAALTL 61

Query: 62  ITPEDPR-SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            T +D   +L +IRH  AHIMA AVQ IWP+V+V IGP+I +G+YYDFD+  PF+ ++L 
Sbjct: 62  NTMKDEAPALELIRHDLAHIMARAVQEIWPDVKVTIGPVISNGWYYDFDRAAPFTPEDLG 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEKKM++II    P   +    ++A + +    E YK+E++E+IP  E + +Y  G+W 
Sbjct: 122 LIEKKMKDIINLRDPVRTEIWDRDRAIQHYRDTGEPYKIELIEAIPGDEPLRMYWHGDWQ 181

Query: 181 DLCRGPHVRSTGQ-VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           DLCRGPH+++TGQ     FKLM VAGAYWRGDS RPML RIYG A+  +  L  YL FLE
Sbjct: 182 DLCRGPHLQNTGQVPADAFKLMSVAGAYWRGDSTRPMLQRIYGVAFQNRDALKDYLTFLE 241

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQ 298
           E+E+RDHRKL REMDLFH+ E+  G +FWH  GW ++ TL  YMRR+ +   Y E+NTPQ
Sbjct: 242 EAERRDHRKLGREMDLFHMQEEAPGQVFWHPNGWTVYTTLQDYMRRQQRRGGYVEVNTPQ 301

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW+ SGHW+ Y+ NMF V+  ++  ++    ALKPMNCP HV +FN GLKSYR+L
Sbjct: 302 VVDRKLWEASGHWEKYQENMFIVEVDEEHAREKAVNALKPMNCPCHVQIFNQGLKSYRDL 361

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFGS  R EPSG+LHG+MRVRGFTQDDAH+FCT++Q+ +E  +    +  IY D 
Sbjct: 362 PLRMAEFGSCNRYEPSGALHGIMRVRGFTQDDAHIFCTEDQIESETARFIAFLSGIYADL 421

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF    V  STRP+ R GSD +WD AE+ +              I   V  GEGAFYGPK
Sbjct: 422 GFPNFEVLFSTRPDVRAGSDEVWDKAESALLSATRAAG------IEPKVNPGEGAFYGPK 475

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ L DAIGR WQCGT QVDF LP R +A Y+ +   K  PVM+HRAV GS ERFIGI+
Sbjct: 476 LEFTLTDAIGRKWQCGTHQVDFVLPERLDANYIGTDGAKHRPVMLHRAVLGSFERFIGIL 535

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE   G LP WL+P Q +V +I S A +   ++A  L   ++  E D RNE INYK+REH
Sbjct: 536 IEEHSGRLPFWLAPRQVVVASIVSDADDCVTKVARNLTDLNIRAEADTRNEKINYKVREH 595

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDC 650
           S+ K+P+I+ CG +E  + ++ +RR G   ++ V L      L +E+ PPD 
Sbjct: 596 SVGKVPVILACGPREVEDGTVSLRRLGEKDSRIVPLDQVAAELAREATPPDL 647


>gi|170754255|ref|YP_001782772.1| threonyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
 gi|229557978|sp|B1IMV3|SYT_CLOBK RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|169119467|gb|ACA43303.1| threonyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
          Length = 635

 Score =  674 bits (1739), Expect = 0.0,   Method: Composition-based stats.
 Identities = 296/643 (46%), Positives = 418/643 (65%), Gaps = 16/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+T  DG +  F      SD+A  IS +L KKA+A  I+G+  DL   + ++ S+EI+
Sbjct: 1   MIKITLKDGKVMEFEEGIKISDIAMKISPALYKKALAAKIDGETMDLMTELHKDSSLEIL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T ED      +RH+ AHI+A+AV+ ++PEV++AIGP I+ GFYYDF+ +  F+ + L +I
Sbjct: 61  TFEDEMGKWALRHTGAHILAQAVKRLYPEVKLAIGPAIDTGFYYDFEADFTFTPEILEKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E ++++II  +    +  L  E+A  L +   E YKVE++E +P  E ++ Y+QG++ DL
Sbjct: 121 EAEIKKIIKENHKLERFELPREEAINLMKENNEDYKVELIEDLPEGEVISFYKQGDFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPHV STG+VK   KL+ +AGAYWRG+ N  ML RIYGTA+  + EL +YL  LEE++
Sbjct: 181 CAGPHVPSTGKVKSV-KLLSLAGAYWRGNENNKMLQRIYGTAFTKKSELDEYLNMLEEAK 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLD 301
           KRDHRKL +E+DLF I E+G G  F+H KG  +   L S+ R +  K  Y+EI TP +L+
Sbjct: 240 KRDHRKLGKELDLFSIHEEGPGFPFFHPKGMIVRNILESFWREEHTKAGYQEIRTPLILN 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW QSGHWD Y+ NM+       T  D   +A+KPMNCPG + V+ + + SYR+LP+R
Sbjct: 300 EALWHQSGHWDHYKENMYF------TNIDDGDYAIKPMNCPGGILVYKNSMHSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           L+E G V+R+E SG+LHGLMRVR FTQDDAH++ TKEQ+  E + I  LI   YK FGFE
Sbjct: 354 LSELGIVHRHELSGALHGLMRVRCFTQDDAHLYMTKEQIKEEVVGIIKLIDKFYKLFGFE 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPE  +GSD  W+ A N +K  LD+I           V  G+GAFYGPK ++
Sbjct: 414 YF-VELSTRPEDSMGSDEDWEIATNGLKEALDSIGK------EYRVNEGDGAFYGPKIDF 466

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            LKD IGR WQCGTIQ+DF +P RF+  Y+ +  EK  PVM+HR ++GS+ERFIGI+IE 
Sbjct: 467 HLKDCIGRTWQCGTIQLDFQMPERFDLSYIGADGEKHRPVMVHRTIYGSVERFIGILIEQ 526

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  P WL+P+Q  +  IT +  +Y +++   LK +++ +E D RNE I YKIRE  ++
Sbjct: 527 YAGAFPTWLAPVQVKLMNITDAQYDYLKKVEETLKENNIRVEIDTRNEKIGYKIREAQLQ 586

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K+P ++I GDKE     + +R         +SL + I  +  E
Sbjct: 587 KVPYMLILGDKEVEAGKVAVRSRKDGDLGAISLEEFIEKIKNE 629


>gi|238749482|ref|ZP_04610987.1| Threonyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
 gi|238712137|gb|EEQ04350.1| Threonyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
          Length = 642

 Score =  674 bits (1739), Expect = 0.0,   Method: Composition-based stats.
 Identities = 291/647 (44%), Positives = 429/647 (66%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS + +    +  DVA  I   LAK  +A  +NG++ D SD +  +  +
Sbjct: 1   MPV---ITLPDGSQRQYDHAVSALDVALDIGPGLAKACIAGRVNGELVDASDLIESDAQL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L ++RHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D ++  + ++L
Sbjct: 58  AIITTKDAEGLEILRHSCAHLLGHAIKQLWPDTKMAIGPVIDNGFYYDVDIDRTLTQEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M E+  +D   +K+ +S ++AR+ F ++ E YKV IL E+I   +   LY   E
Sbjct: 118 DLLEKRMHELADKDYDVIKKKVSWQEARDTFAARGEDYKVAILDENISRDDRPGLYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KL K +GAYWRGDS   ML RIYGTAW  +++L  YL  L
Sbjct: 178 YVDMCRGPHVPNMRFCHHF-KLQKTSGAYWRGDSKNKMLQRIYGTAWGDKKQLNAYLQRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF+ L +++R K+K+  Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELETFVRMKLKEYQYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW+++GHW++Y  +MF       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 297 FMMDRVLWEKTGHWENYAEHMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  
Sbjct: 351 LPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQVRDEVNSCIKMVYDMYST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI+VKLSTRPEKR+GSD LW  AE+ +   L      +++ I      GEGAFYGP
Sbjct: 411 FGFEKIVVKLSTRPEKRIGSDDLWTRAEDDLAAAL------TENGIPFDYQPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF+LP R +A Y+  ++++  PVMIHRA+ GS+ERFIGI
Sbjct: 465 KIEFTLHDCLDRAWQCGTVQLDFSLPGRLSASYIGENNDRQVPVMIHRAILGSMERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E + G  P WL+P+Q +V  IT S  +Y Q++   L+   +  + D RNE I +KIRE
Sbjct: 525 LTEEYAGFFPTWLAPVQVVVMNITDSQSDYVQQVTKKLQDAGIRAKADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H+++++P +++CGDKE     I +R         + +   +  L  E
Sbjct: 585 HTLRRVPYMLVCGDKEVESGKIAVRTRRGKDLGSLDVNVVVDQLLAE 631


>gi|332981193|ref|YP_004462634.1| Ser-tRNA(Thr) hydrolase [Mahella australiensis 50-1 BON]
 gi|332698871|gb|AEE95812.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Mahella
           australiensis 50-1 BON]
          Length = 637

 Score =  674 bits (1739), Expect = 0.0,   Method: Composition-based stats.
 Identities = 276/643 (42%), Positives = 412/643 (64%), Gaps = 16/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+   DGSIK +    T + +A  IS  LA++A+A  +NG+V DLS P+  +  + ++
Sbjct: 1   MIKIKLKDGSIKEYSEGITPAQIAADISAGLAREALAALVNGQVMDLSMPIYEDADLALL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D        H+ +HIMA+AV  ++PE ++AIGP I++GFYYDFD ++PF+ ++L  I
Sbjct: 61  TFDDEDGKKAYWHTTSHIMAQAVLRLFPEAKLAIGPAIDNGFYYDFDIDKPFTPEDLISI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E++M++II  D    +  L  ++A +  + + + YKVE++E++P    ++ Y+QGE+ DL
Sbjct: 121 EEEMRKIIKEDLSLERFELPRDEAVKFMQERNQPYKVELIEALPENAVISFYKQGEFVDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPH+ STG++K   KL+ VAGAYWRGD +  ML RIYG ++  +  L +YL  +EE++
Sbjct: 181 CAGPHIPSTGKIK-AVKLLSVAGAYWRGDEHNKMLQRIYGISFPKKSMLDEYLTRIEEAK 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD 301
           +RDHRKL +E+DLF + E+G G  F+H KG  I   L  + R++ +   YEEI TP +L+
Sbjct: 240 QRDHRKLGQELDLFSLHEEGPGFPFFHPKGMIIRNVLEDFWRKEHRKHGYEEIKTPIILN 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW QSGHWD Y+ NM+  K       D + +A+KPMNCPG + ++   + SY+ELP+R
Sbjct: 300 KELWIQSGHWDHYKDNMYFTKI------DDQDYAIKPMNCPGSMIMYKRTMHSYKELPIR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           L E G V+R+E SG LHGLMRVR FTQDDAH+F    Q+ +E + + +LI   Y  FGF+
Sbjct: 354 LCELGLVHRHEKSGVLHGLMRVRCFTQDDAHIFMLPSQVTDEIIGVIDLIDYFYSLFGFK 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPE  +G+D  W+ A   +K  L       +  ++  V  G+GAFYGPK ++
Sbjct: 414 YH-VELSTRPEDSMGTDEQWEMATEALKVAL------GKKGLDYKVNEGDGAFYGPKIDF 466

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L+D+IGR WQCGTIQ+DF +P RF+  Y+   SEK  PVM+HR +FGSIERFI I+ E+
Sbjct: 467 HLEDSIGRTWQCGTIQLDFQMPERFDLTYIGEDSEKHRPVMLHRVIFGSIERFIAILTEH 526

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G LP WL+P+Q  +  IT  ++EYA+ +   L+   +  E D RNE I YKIR   I+
Sbjct: 527 YAGALPTWLAPVQVKILPITDRSLEYARSLQMHLEELDIRTELDNRNEKIGYKIRAAQIE 586

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K+P +++ GDKE    ++ +R         +S+ D   ++  E
Sbjct: 587 KVPYMLVIGDKEVENVAVSVRSRSKGDMGSMSVDDFENLIKTE 629


>gi|160900048|ref|YP_001565630.1| threonyl-tRNA synthetase [Delftia acidovorans SPH-1]
 gi|238687213|sp|A9C3D4|SYT_DELAS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|160365632|gb|ABX37245.1| threonyl-tRNA synthetase [Delftia acidovorans SPH-1]
          Length = 643

 Score =  674 bits (1738), Expect = 0.0,   Method: Composition-based stats.
 Identities = 323/651 (49%), Positives = 443/651 (68%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAI----NGKVCDLSDPV-REGS 58
            I +T PDGS + +P   T ++VA SI   LAK A+A  +    + KV D S  + ++  
Sbjct: 1   MIHITLPDGSQREYPGPVTVAEVAASIGTGLAKAALAGKVGTGDDAKVVDTSFVINKDMP 60

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           + I+T +D   L VIRHS AH++A AV+ ++P+ QV IGP+IE+GFYYDF  ++PF+ ++
Sbjct: 61  LSIVTAKDADGLDVIRHSTAHLLAYAVKDLFPDAQVTIGPVIENGFYYDFSYKRPFTPED 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L  IEK+M E+ A+D P +++ L  ++A   F+   E YK EI+ SIP+ E+V+LYR+G 
Sbjct: 121 LVAIEKRMAELAAKDEPVVRRVLPRDEAVAYFKGIGENYKAEIIASIPSNEDVSLYREGS 180

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + DLCRGPHV STG++K FFKLMKVAGAYWRGD    ML R+YGTAW ++ +L QYL+ L
Sbjct: 181 FEDLCRGPHVPSTGKLK-FFKLMKVAGAYWRGDHRNEMLQRVYGTAWASKDDLQQYLHML 239

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
           EE+EKRDHRKL RE+DLFHI E   G +FWH KGW ++Q +  YMRR  + + Y+E+  P
Sbjct: 240 EEAEKRDHRKLGRELDLFHIDEHSPGTVFWHPKGWSLWQEVEQYMRRVYRDNGYQEVKGP 299

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           Q+LD+ LW+++GHWD YR NMF       T  + R +ALKPMNCPGH+ +F  G+KSYR+
Sbjct: 300 QILDKTLWEKTGHWDKYRENMFT------TESEKRDYALKPMNCPGHILIFKQGIKSYRD 353

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R  EFG  +RNEP+G LHG+MRVRGFTQDD HVFCT++Q+  E L    L+  +Y D
Sbjct: 354 LPLRYGEFGQCHRNEPTGGLHGIMRVRGFTQDDGHVFCTEDQIQPEVLAFTTLLQKVYAD 413

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF  I+ K++TRPE R+GSD  WD AE  +   L+             +  G+GAFYGP
Sbjct: 414 FGFSDIIYKVATRPEARIGSDESWDKAEAALINSLEASGC------EYVISPGDGAFYGP 467

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K EY LKDAIGR WQCGTIQVDF++P R +A YV    ++  PVM+HRA+ GS+ERFIGI
Sbjct: 468 KIEYTLKDAIGRQWQCGTIQVDFSMPERLDAEYVGEDGDRHRPVMLHRAIVGSLERFIGI 527

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSH----HLSIETDFRNETINY 593
           +IE   G +P WL+P+QA V  IT +  +Y +E+A  L+       L + TD RNE I Y
Sbjct: 528 LIEQHAGAMPTWLAPVQAAVLNITDAQADYVREVAQKLQKAFPNQGLRVATDLRNEKITY 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIREHS++K+P I++ GDKE +  ++ +R  G+     +S+   I ++ K+
Sbjct: 588 KIREHSLQKLPYILVAGDKEKAAGAVAVRARGNKDLGVMSVDAFIELVAKD 638


>gi|261855919|ref|YP_003263202.1| threonyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
 gi|261836388|gb|ACX96155.1| threonyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
          Length = 637

 Score =  674 bits (1738), Expect = 0.0,   Method: Composition-based stats.
 Identities = 314/647 (48%), Positives = 432/647 (66%), Gaps = 15/647 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +T PD S + F    T  ++A  I   LAK A+A  I+ K+ DLS  V  +  I I+
Sbjct: 1   MLTITLPDASQRTFENPVTLGEIAADIGPGLAKAAIAGKIDDKLVDLSRVVDHDARIAIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +DP  L VIRHS AH+MA+AV+ ++P  QV IGP+I++GFYYDF  E+PF+ ++LA I
Sbjct: 61  TAKDPEGLEVIRHSTAHLMAQAVKQLYPSAQVTIGPVIDNGFYYDFYFERPFNDEDLAAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M E+ A+     ++ +   +A + F+   E +KVEI++SIP  E +TLY QG++ D 
Sbjct: 121 EARMHELAAKGDDLTRRVVDRSEAVQFFDQLGEEFKVEIIQSIPEAEELTLYTQGDFTDF 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +T ++K F KLMKVAGAYWRGD+  PML+RIYGTA+ + +EL  YL  L E+E
Sbjct: 181 CRGPHVPNTNRLKVF-KLMKVAGAYWRGDAKNPMLTRIYGTAFASDKELKVYLNQLAEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHR++ ++ +LFH  E+  G++FWH KGW ++Q +  +MR   +   Y+EI  PQ+LD
Sbjct: 240 KRDHRRIGKQQNLFHFQEEAPGLVFWHPKGWALWQVIEQHMRGIYRSSGYDEIRCPQILD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             LW++SGHWD+Y+ NMF       T  + RTFA+KPMNCPGHV VFNHGL SYR+LP+R
Sbjct: 300 VSLWKKSGHWDNYQENMFF------TESEKRTFAVKPMNCPGHVQVFNHGLHSYRDLPIR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
             EFGS +RNEPSG+LHG++RVRGFTQDD H+FC + Q+ +E    H   +S+Y  FGF 
Sbjct: 354 YGEFGSCHRNEPSGALHGILRVRGFTQDDGHIFCMESQIESEVKAFHEQALSVYATFGFT 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            I VK++ RP+KR+GSD +WD+AE                 +    L GEGAFYGPK EY
Sbjct: 414 DIQVKIALRPDKRLGSDVVWDEAEAA------LRGALRAAGVAWTELPGEGAFYGPKIEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            LKDAIGR WQ GTIQVDF +P R  A YV+ HSE+ HPVM+HRA+ GS+ERFIGI+IE+
Sbjct: 468 HLKDAIGRTWQLGTIQVDFMMPERLGATYVDEHSERRHPVMLHRAIVGSMERFIGILIEH 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G LP WL+PIQ +V  IT     Y Q++   LK+  + +  D RNE + +KIREH+++
Sbjct: 528 HAGMLPFWLAPIQVVVMGITDKHAGYVQQLTAKLKASGIRVVEDLRNEKVGFKIREHTLE 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
           ++P +++ GD+E    SI +R    T    +++ D +  L  ES  P
Sbjct: 588 RVPYLLVAGDREMETESIAVRTREGTDLGVMAVTDLLEKLQSESRAP 634


>gi|311693962|gb|ADP96835.1| threonyl-tRNA synthetase [marine bacterium HP15]
          Length = 641

 Score =  674 bits (1738), Expect = 0.0,   Method: Composition-based stats.
 Identities = 313/646 (48%), Positives = 441/646 (68%), Gaps = 18/646 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS ++F    T  DVA  I   LAK A+A  ++G++ D S  +  +  +
Sbjct: 1   MPV---VTLPDGSHRSFAEPVTVHDVAADIGAGLAKAALAGKVDGQLVDTSYRIENDAEL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            I+T  D   + VIRHS AH+MA AVQ ++P  QV IGP+I++GFYYDF  ++PF++++L
Sbjct: 58  AIVTERDEEGVDVIRHSTAHLMAMAVQELFPGAQVTIGPVIDNGFYYDFKYDRPFTNEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A+IEK+M+E+  +D P  +  +S ++A +LFE   E YKV I++ IP +E+++ Y QG++
Sbjct: 118 ARIEKRMEELSKQDLPVSRSIMSRDEAIKLFEDMGEEYKVRIIQDIPGEEDLSFYSQGDF 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV STG++K F KL KVAGAYWRGD++   L R+YGTAW  +++L  YL+ LE
Sbjct: 178 IDLCRGPHVPSTGKLKAF-KLTKVAGAYWRGDTSNEQLQRVYGTAWGNKKDLKAYLHRLE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+EKRDHRK+ +++ LFH+ E+  G++FWH  GW ++Q +  YMRRK ++  Y+EI TPQ
Sbjct: 237 EAEKRDHRKVGKKLGLFHMQEEAPGMVFWHPDGWSLYQEIEQYMRRKQQEHGYKEIKTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+ ++LW++SGHWD ++ +MF       T  +   +A+KPMNCP HV VFN GLKSY++L
Sbjct: 297 VVSRNLWEKSGHWDKFKDDMFT------TESEKHDYAIKPMNCPCHVQVFNQGLKSYKDL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFGS +RNE SG+LHGLMRVRGFTQDDAH+FC ++ +  E      ++  IY DF
Sbjct: 351 PLRLAEFGSCHRNEASGALHGLMRVRGFTQDDAHIFCEEDAIQQEVSSFIEMLHEIYTDF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF +I+ KLSTRPEKRVGSD +WD AE  ++  L+      ++ ++  +L GEGAFYGPK
Sbjct: 411 GFTEILYKLSTRPEKRVGSDEVWDKAEAALEEALN------REGVDWELLPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD IGR WQCGTIQVDF++P R  A YV  +SE+  PVM+HRAV GS ERFIGI+
Sbjct: 465 IEFSLKDCIGRVWQCGTIQVDFSMPGRLGAQYVADNSERKTPVMLHRAVLGSFERFIGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE ++G  P WL+P Q  +  IT +  +Y Q +A    S    +  D RNE I +KIREH
Sbjct: 525 IEEYEGAFPTWLAPTQVAILNITDNQRDYCQNLAKKWDSLGYRVNADLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           ++ K+P +++ GDKE    ++ +R         +SL     +L K+
Sbjct: 585 TLNKVPYLVVVGDKEVENNAVAVRTRKGEDLGTLSLEAFEQLLQKD 630


>gi|196040031|ref|ZP_03107334.1| threonine--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|196029290|gb|EDX67894.1| threonine--tRNA ligase [Bacillus cereus NVH0597-99]
          Length = 639

 Score =  674 bits (1738), Expect = 0.0,   Method: Composition-based stats.
 Identities = 277/644 (43%), Positives = 432/644 (67%), Gaps = 17/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEII 62
            I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N ++ DL   + E   +EII
Sbjct: 5   MIEIKFPDGSVKEFVKGITLEEIAGSISSSLKKKAVAGKVNDELYDLRRNIEENAEVEII 64

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +    + + RHS AHI+A+AV+ ++ ++ + +GP+IE+GFYYD D     + ++L +I
Sbjct: 65  TIDSNEGVEIARHSAAHILAQAVKRLYGDINLGVGPVIENGFYYDMDLPSSVNVEDLRKI 124

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M++II  +    +  +S E+A +LF+   +  K+E+LE+IP+ E+VTLY+QGE+ DL
Sbjct: 125 EKEMKKIINENIKIERVEVSREEAAKLFQEMNDRLKLELLEAIPSGESVTLYKQGEFVDL 184

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ STG +K F     V+GAYWRGDSN  +L RIYG A+++Q+EL +YL+F+EE+ 
Sbjct: 185 CRGPHLPSTGYLKAFQLTH-VSGAYWRGDSNNQVLQRIYGVAFSSQKELEEYLHFVEEAA 243

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KR+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R  + + +Y+E+ TP +++
Sbjct: 244 KRNHRKLGNELELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMN 303

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           Q +W++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R
Sbjct: 304 QEVWERSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIR 357

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           + EFG V+R+E SG+L+GL+RVR F QDDAH+F T EQ+ +E   +   I  +YK FGF+
Sbjct: 358 MCEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPEQIEDEIKSVMAQIDYVYKTFGFK 417

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPE  +G D LW+ AE  ++ VL ++           +  G+GAFYGPK ++
Sbjct: 418 Y-EVELSTRPEDSMGDDKLWEQAEASLENVLQSLNY------KYRLNEGDGAFYGPKIDF 470

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+ R  QCGTIQ+DF +P +F+  Y++  +EK  PV+IHRAV GS++RF+ I+IE+
Sbjct: 471 HIKDALNRSHQCGTIQLDFQMPEKFDLNYIDEKNEKKRPVVIHRAVLGSLDRFLAILIEH 530

Query: 542 FKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           F G  P W++P+Q  V  ++++  V+YA E+A+ L    + +E D R+E + YKIRE  +
Sbjct: 531 FGGAFPAWVAPVQVKVIPVSNAVHVQYADEVADKLAQAGVRVERDMRDEKLGYKIREAQM 590

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +K+P +++ GDKE    ++ +R++G   +  + L   +  + +E
Sbjct: 591 QKVPYVLVIGDKEMENGAVNVRKYGEEKSGVIELDMFVESMKEE 634


>gi|84624684|ref|YP_452056.1| threonyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|73919845|sp|Q5GXY0|SYT_XANOR RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|123725509|sp|Q2P0Z5|SYT_XANOM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|84368624|dbj|BAE69782.1| threonyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF
           311018]
          Length = 634

 Score =  674 bits (1738), Expect = 0.0,   Method: Composition-based stats.
 Identities = 287/644 (44%), Positives = 420/644 (65%), Gaps = 16/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +T PDGS + F    +   VA+SI   LAK  +A  ++G++ D SD +  + S+ II
Sbjct: 1   MINITLPDGSRREFESPVSVMQVAQSIGAGLAKATIAGRVDGQLVDASDVIDHDASLRII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   + +IRHSCAH++  AV+ ++PEV++ IGP+I +GFYYD   E+PF+ +++A I
Sbjct: 61  TAKDAEGVEIIRHSCAHLVGHAVKQLYPEVKMVIGPVIAEGFYYDIYSERPFTPEDMAAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-ENVTLYRQGEWFD 181
           E++MQ +IA+D   +K+     +  E+F  + E YK+ +++ +      + LY   E+ D
Sbjct: 121 EQRMQALIAQDYDVIKKVTPRAEVIEVFAQRGEEYKLRLIDDMSDDITAMGLYYHQEYVD 180

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           +CRGPHV +T  +K F KL +++GAYWRGD+    L RIYGTAW  +++L  Y+  +EE+
Sbjct: 181 MCRGPHVPNTRFLKAF-KLTRISGAYWRGDAKNEQLQRIYGTAWADKKQLDAYILRMEEA 239

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
           +KRDHR++ +  DLFH+ E+  G++FWH KGW ++Q +  YMR+  +D  Y E+  PQ+L
Sbjct: 240 DKRDHRRIGKAQDLFHLQEEAPGLVFWHPKGWSLWQVVEQYMRKVYRDSGYGEVRCPQIL 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D  LWQ+SGHWD+Y+  MF       T  + RT+A+KPMNCPGHV VFN GL SYR+LP+
Sbjct: 300 DVSLWQKSGHWDNYQDAMFF------TESEKRTYAVKPMNCPGHVQVFNQGLHSYRDLPI 353

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R  EFG+ +RNEPSG+LHG++RVRGFTQDD HVFC + Q+ +E    H   +++Y  FGF
Sbjct: 354 RYGEFGACHRNEPSGALHGILRVRGFTQDDGHVFCLESQIESEVTAFHQQALAVYTAFGF 413

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           + I +K++ RPEKR+G DA WD AE  ++  L          +    L GEGAFYGPK E
Sbjct: 414 DDIQIKIALRPEKRLGDDATWDKAEAALRSAL------GVCGVEWQELPGEGAFYGPKIE 467

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           Y LKDAIGR WQ GT+QVDF +P R  A YV+ +S+K HPVM+HRA+ GS+ERFIGI+IE
Sbjct: 468 YHLKDAIGRTWQLGTMQVDFMMPGRLGAEYVDENSQKKHPVMLHRAIVGSMERFIGILIE 527

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +  G  P WL+P+Q +V  IT +  +Y   +   L +    +  D RNE I YKIREH++
Sbjct: 528 HHAGAFPSWLAPVQVVVANITDAQADYVDAVRKTLANQGFRVSADLRNEKIGYKIREHTL 587

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +++P +++ GD+E    ++ +R         +++   I  L  E
Sbjct: 588 QRVPYLLVVGDREKENGAVAVRTRSGEDLGTMTVSAFIERLQAE 631


>gi|322833539|ref|YP_004213566.1| threonyl-tRNA synthetase [Rahnella sp. Y9602]
 gi|321168740|gb|ADW74439.1| threonyl-tRNA synthetase [Rahnella sp. Y9602]
          Length = 642

 Score =  674 bits (1738), Expect = 0.0,   Method: Composition-based stats.
 Identities = 285/647 (44%), Positives = 431/647 (66%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS + F    +  DVA  I   LAK  +A  +NG++ D +D +  +  +
Sbjct: 1   MPV---ITLPDGSQRVFDRPVSPLDVALDIGPGLAKACIAGRVNGELVDATDLIEVDAQL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L ++RHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D ++  + +++
Sbjct: 58  AIITAKDEAGLEILRHSCAHLLGHAIKQLWPDTKMAIGPVIDNGFYYDVDLDRTLTQEDI 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M E+  ++   +K+ +S ++AR+ F S+ E YKV IL E+I   ++  LY   E
Sbjct: 118 ELLEKRMHELAEKNYDVIKKKVSWQEARDTFASRGEEYKVAILDENISHDDHPGLYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KL K +GAYWRG+S+  ML RIYGTAW  +++L  Y+  L
Sbjct: 178 YVDMCRGPHVPNMRFCHHF-KLQKTSGAYWRGNSDNKMLQRIYGTAWADKKQLNAYIQRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF+ L +++R K+K  DY+E+  P
Sbjct: 237 EEAGKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEAFVRMKLKSYDYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW+++GHW++Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 297 FMMDRVLWEKTGHWENYKEAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  
Sbjct: 351 LPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQVRDEVNSCIRMVYDMYST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI+VKLSTRPEKR+G+D +W  AE+ +   L      +++ I      GEGAFYGP
Sbjct: 411 FGFEKIVVKLSTRPEKRIGTDEMWTRAEDDLAAAL------TENDIPFEYQPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF+LP R NA Y+   +++  PVMIHRA+ GS+ERFIGI
Sbjct: 465 KIEFTLHDCLDRAWQCGTVQLDFSLPGRLNASYIGESNDRQVPVMIHRAILGSMERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E + G  P W++P+Q ++  IT S   Y +E+   L+   + ++ D RNE I +KIRE
Sbjct: 525 LTEEYAGFFPTWMAPVQVVIMNITDSQATYVEELTKKLQDAGIRVKADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H+++++P +++CGDKE     + +R         + + + +  L  E
Sbjct: 585 HTLRRVPYMLVCGDKEVEAGKVAVRTRRGKDLGSMDVSEVVDKLLAE 631


>gi|163752580|ref|ZP_02159762.1| threonyl-tRNA synthetase [Shewanella benthica KT99]
 gi|161327534|gb|EDP98738.1| threonyl-tRNA synthetase [Shewanella benthica KT99]
          Length = 642

 Score =  674 bits (1738), Expect = 0.0,   Method: Composition-based stats.
 Identities = 282/647 (43%), Positives = 414/647 (63%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP    +T PDGS + F    +  DVA  I   LAK  +A  +NG++ D  D +  +  +
Sbjct: 1   MPV---ITLPDGSKREFANPVSTLDVAADIGPGLAKACIAGRVNGELKDACDIIDTDSEL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   + ++RHSCAH++  A + +WPE ++AIGP+I++GFYYD D E   + +++
Sbjct: 58  SIITVKDEEGVEILRHSCAHLLGHAFKQLWPEAKMAIGPVIDNGFYYDIDLEHKLTQEDI 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             ++K+M ++   +    K+  S + AR+ F ++ E YK+ IL E+I   +   LY   E
Sbjct: 118 DALQKRMTQLAKTNYKVEKRVGSWQVARDTFAARGETYKMAILDENISKDDQPALYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +    + F KLM VAGAYWRG+S+  ML R+YGTAW  ++ L  +L  L
Sbjct: 178 YVDMCRGPHVPNMRFCQNF-KLMSVAGAYWRGNSDNKMLQRVYGTAWADKKALKIHLNRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW +F  L  ++R K+ +  Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTLFLELEKFIREKLGQYTYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW++SGHWD Y   MF  K       + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 297 LMMDRVLWERSGHWDKYSEAMFTTK------SENREYVIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFG  +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+  E      ++   Y  
Sbjct: 351 LPLRMAEFGCCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQVQQEVSACIKMVYDTYAT 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF  I++KLSTRPE+R+G D +WD AE  +K  L        + I   +L GEGAFYGP
Sbjct: 411 FGFNNIVIKLSTRPEQRIGDDEMWDRAEEALKQALIA------NDIEFEILPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+D+ LP R  A YV   + +  PVMIHRA+ GS+ERF+GI
Sbjct: 465 KIEFTLHDCLDRAWQCGTVQLDYALPGRLGATYVAEDNSRQTPVMIHRAILGSLERFLGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE + G  P WL+P+Q +V  IT    +YA E+ NLLK + +    D RNE I +KIRE
Sbjct: 525 LIEEYAGKFPTWLAPMQVVVMNITDKQSDYAHEVVNLLKENGIRASKDLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H+++++P +++ GD+E   + + +R        K+ + +    + K+
Sbjct: 585 HTLRRVPYLLVVGDQEMENKEVAVRTRDGVDLGKMRIEEFAAKVNKQ 631


>gi|120554978|ref|YP_959329.1| threonyl-tRNA synthetase [Marinobacter aquaeolei VT8]
 gi|166223352|sp|A1U2C3|SYT_MARAV RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|120324827|gb|ABM19142.1| Ser-tRNA(Thr) hydrolase [Marinobacter aquaeolei VT8]
          Length = 641

 Score =  674 bits (1738), Expect = 0.0,   Method: Composition-based stats.
 Identities = 315/646 (48%), Positives = 439/646 (67%), Gaps = 18/646 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS ++F    T  DVA  I   LAK A+A  +NGK+ D S  +  +  +
Sbjct: 1   MPV---ITLPDGSHRSFAEPVTVHDVAADIGAGLAKAALAGKVNGKLVDTSHLIENDTEL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            I+T  D   + +IRHS AH+MA AVQ ++P  QV IGP+IE+GFYYDF  E+PF+++++
Sbjct: 58  AIVTERDEDGVDIIRHSTAHLMAMAVQELFPGAQVTIGPVIENGFYYDFKYERPFTNEDM 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A+IEK+M+E+  +D P  +  +S ++A +LF    E YKV I+E IP +E+++ YRQG++
Sbjct: 118 ARIEKRMEELAKQDLPVSRSIMSRDEAIKLFNEMGEEYKVRIIEDIPGEEDLSFYRQGDF 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV STG++K F KL KVAGAYWRGD++   L RIYGTAW  +++L  YL+ LE
Sbjct: 178 IDLCRGPHVPSTGKLKAF-KLTKVAGAYWRGDTSNEQLQRIYGTAWGNKKDLKAYLHRLE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQ 298
           E+EKRDHRK+ +++ LFH+ E+  G++FWH  GW ++Q +  YMR ++ K  Y+EI TPQ
Sbjct: 237 EAEKRDHRKIGKKLGLFHMQEEAPGMVFWHPDGWSLYQEVEQYMRAQQHKHGYKEIKTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+ + LW++SGHWD ++ +MF       T  +   +A+KPMNCP HV VFN GLKSY++L
Sbjct: 297 VVSRTLWEKSGHWDKFKDDMFT------TESEKHDYAIKPMNCPCHVQVFNQGLKSYKDL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFGS +RNE SG+LHGLMRVRGFTQDDAH+FC ++ +  E      ++  IY DF
Sbjct: 351 PLRLAEFGSCHRNEASGALHGLMRVRGFTQDDAHIFCEEDAIQEEVSAFIAMLHEIYADF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF +I+ KLSTRPEKRVGSD +WD +E  ++  L+      ++ ++  +L GEGAFYGPK
Sbjct: 411 GFSEILYKLSTRPEKRVGSDEVWDKSEAALEQALN------REGVDWELLPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD +GR WQCGTIQVDF++P R  A YV  +SE+  PVM+HRAV GS ERFIGI+
Sbjct: 465 IEFSLKDCLGRVWQCGTIQVDFSMPGRLGAQYVADNSERKTPVMLHRAVLGSFERFIGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE ++G  P WL+P Q  V  IT    +Y Q +A  L S    +  D RNE I +KIREH
Sbjct: 525 IEEYEGAFPTWLAPTQVAVLNITDKQRDYCQNLAKKLDSSGYRVNADLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           ++ K+P +++ GDKE    ++ +R         +S+ D   +L  +
Sbjct: 585 TLNKVPYLVVVGDKEIENNAVAVRTRKGEDLGTMSVDDFEKLLAAD 630


>gi|282850470|ref|ZP_06259849.1| threonine--tRNA ligase [Veillonella parvula ATCC 17745]
 gi|282579963|gb|EFB85367.1| threonine--tRNA ligase [Veillonella parvula ATCC 17745]
          Length = 636

 Score =  674 bits (1738), Expect = 0.0,   Method: Composition-based stats.
 Identities = 279/644 (43%), Positives = 410/644 (63%), Gaps = 16/644 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEI 61
           +D+K+  PDGS K +    T  +  + +S SLAKK +A  +NG++ DL + + +GS +  
Sbjct: 2   ADVKIILPDGSAKEYAAGTTLGEAVKQLSNSLAKKVLAANVNGELTDLREELVDGSEVAF 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +T E+      +RH+ +HI+A+AV+ +WPE ++AIGP I+ GFYYD D E   + ++L +
Sbjct: 62  LTFEEDGGKHTLRHTASHILAQAVKRLWPEAKLAIGPAIDKGFYYDIDMEHTLTPEDLGK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK+M  I+  + P  K  +  ++A + F++K E YKVE+++ +P    ++ Y QG++ D
Sbjct: 122 IEKEMSRIVKENLPITKSVMPRQEAIDFFKAKNEDYKVELIQDLPEDAVISCYSQGDFID 181

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LC GPHV STG+VK F KL  +AGAYWRGD    ML RIYGTA+  ++EL  YL+ LEE+
Sbjct: 182 LCAGPHVASTGKVKAF-KLQSIAGAYWRGDEKNKMLQRIYGTAFEKKEELDAYLHMLEEA 240

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
            KRDHRKL +E+ LF I E+G G  F+  KG  +   L ++ R    D DYEEI TP +L
Sbjct: 241 AKRDHRKLGKELGLFVIKEEGPGFPFFLPKGMALRNELENFWREVHHDFDYEEIRTPIIL 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            +HLW+ SGHWD YR NM+       TI D   +A+KPMNCPG + V+ + + SYR+ P+
Sbjct: 301 SKHLWETSGHWDHYRENMYT------TIIDDEEYAIKPMNCPGGILVYQNEMHSYRDFPL 354

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R AE G V+R+E SG+LHGL RVR FTQDDAHVF   +QM  E +K+  L   IY  FG 
Sbjct: 355 RYAELGLVHRHELSGALHGLFRVRAFTQDDAHVFMLPDQMQTELMKVIELFDRIYSQFGL 414

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           +   V+LST+P+  +G DA+W+ A + ++  ++         I   +  G+GAFYGPK +
Sbjct: 415 KYH-VELSTKPDNAMGDDAIWEQATDALRNAIEA------KGIPYVINPGDGAFYGPKLD 467

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           Y ++D++GR WQCGTIQ+D NLP RF   Y+    +K  P+MIHRA FGS+ERFIGI+ E
Sbjct: 468 YHIEDSLGRTWQCGTIQLDMNLPERFQIEYIGEDGQKHRPIMIHRACFGSMERFIGILTE 527

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           ++ G  P W++P+Q  +  I+   VEYA+E+A  +   ++ +E D R+E I YKIR+  +
Sbjct: 528 HYAGAFPTWMAPVQVKILPISEKHVEYAKELAKQMHRDYVRVEVDDRSEKIGYKIRQAQM 587

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            K+P +++ GDKE  E ++ +R+ G      V   +    +  E
Sbjct: 588 AKVPYMLVVGDKEVEEGTVNVRKHGGDELGSVPFEEFFNSIKIE 631


>gi|86137404|ref|ZP_01055981.1| threonyl-tRNA synthetase [Roseobacter sp. MED193]
 gi|85825739|gb|EAQ45937.1| threonyl-tRNA synthetase [Roseobacter sp. MED193]
          Length = 648

 Score =  674 bits (1738), Expect = 0.0,   Method: Composition-based stats.
 Identities = 324/652 (49%), Positives = 437/652 (67%), Gaps = 10/652 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           + I LTFPDG+ ++F    T ++VA SIS SL KKA++  +NG   DL  P+  + SI +
Sbjct: 2   AKISLTFPDGNARDFDAGITPAEVASSISTSLGKKAISATVNGAHWDLQWPIDADASIAL 61

Query: 62  ITPEDP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            T +D  ++  +IRH  AH+MA AVQ IWP+ +V IGP+IE+G+YYDFD+ +PF+ ++L 
Sbjct: 62  HTMKDEAQANELIRHDLAHVMARAVQEIWPDTKVTIGPVIENGWYYDFDRAEPFTPEDLG 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEKKM+EII +  P   +    ++A + + +  E YKVE++E+IP  E + +Y  G+W 
Sbjct: 122 VIEKKMKEIINKRDPVRTEVWDRQRAVDFYTANDEPYKVELIEAIPGDEPLRMYWHGDWQ 181

Query: 181 DLCRGPHVRSTGQ-VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           DLCRGPH++ TGQ     FKLM +AGAYWRGDS+R ML RIYG A+  +++L  +L+ LE
Sbjct: 182 DLCRGPHLQHTGQLPGDAFKLMSIAGAYWRGDSDRAMLQRIYGVAFTGKEKLKAHLHMLE 241

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+ KRDHRKL REM+L+H+ E+  G +FWH  GWKI+ TL  YMRR + +D Y E+NTPQ
Sbjct: 242 EAAKRDHRKLGREMNLYHMQEEAPGQVFWHPNGWKIYTTLQDYMRRMQERDGYVEVNTPQ 301

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW+ SGHWD Y+ NMF V+  ++  ++    ALKPMNCP HV VFN GLKSYR+L
Sbjct: 302 VVDRKLWEASGHWDKYQENMFIVEVDEEHAREKAVNALKPMNCPCHVQVFNQGLKSYRDL 361

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFGS  R EPSG+LHG+MRVRGFTQDD H+FC ++Q+ +E  K    +  +Y D 
Sbjct: 362 PLRMAEFGSCARYEPSGALHGIMRVRGFTQDDGHIFCAEDQIESETAKFIAFLSKVYADL 421

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF    +KLSTRPEKR+GSD  WD  E  +                  +L GEGAFYGPK
Sbjct: 422 GFHNWTIKLSTRPEKRIGSDESWDLVEKALGDACKAAGY------EYELLEGEGAFYGPK 475

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ L DAIGR+WQCGT+QVD NLP R  A ++ +   K  P M+HRA  GS ERFIGI+
Sbjct: 476 LEFTLTDAIGRNWQCGTLQVDPNLPERLEANFIGADGNKHRPFMLHRATLGSFERFIGIL 535

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE   G LP WL+P Q +V +ITS A +Y  E+   L++  +  E D RNE INYK+REH
Sbjct: 536 IEEHAGKLPFWLAPRQVVVASITSDADDYVHEVVTELQAAGVRAEADIRNEKINYKVREH 595

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDC 650
           S+ K+P+I+  G +E  ER++ IRR G   T+  SL +    L  E+  PD 
Sbjct: 596 SLGKVPVILAIGHREVEERTVSIRRLGEKQTRVDSLENVTKALGVEATAPDL 647


>gi|196033851|ref|ZP_03101262.1| threonyl-tRNA synthetase [Bacillus cereus W]
 gi|228945992|ref|ZP_04108333.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|195993531|gb|EDX57488.1| threonyl-tRNA synthetase [Bacillus cereus W]
 gi|228813685|gb|EEM59965.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
          Length = 639

 Score =  674 bits (1738), Expect = 0.0,   Method: Composition-based stats.
 Identities = 278/644 (43%), Positives = 432/644 (67%), Gaps = 17/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEII 62
            I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N ++ DL   + E   +EII
Sbjct: 5   MIEIKFPDGSVKEFVKGITLEEIAGSISNSLKKKAVAGKVNDELYDLRRIIEENAEVEII 64

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +    + + RHS AHI+A+AV+ ++ ++ + +GP+IE+GFYYD D     + ++L +I
Sbjct: 65  TIDSNEGVEIARHSAAHILAQAVKRLYGDINLGVGPVIENGFYYDMDLPSSVNVEDLRKI 124

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M++II  +    +  +S E+A +LF+   +  K+E+LE+IP+ E+VTLY+QGE+ DL
Sbjct: 125 EKEMKKIINENIKVERVEVSREEAAKLFQEMNDRLKLELLEAIPSGESVTLYKQGEFVDL 184

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ STG +K F     V+GAYWRGDSN  +L RIYG A+++Q+EL +YL+F+EE+ 
Sbjct: 185 CRGPHLPSTGYLKAFQLTH-VSGAYWRGDSNNQVLQRIYGVAFSSQKELEEYLHFVEEAA 243

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KR+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R  + + +Y+E+ TP +++
Sbjct: 244 KRNHRKLGNELELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMN 303

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           Q +W++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R
Sbjct: 304 QEVWERSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIR 357

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           + EFG V+R+E SG+L+GL+RVR F QDDAH+F T EQ+ +E   +   I  +YK FGFE
Sbjct: 358 MCEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPEQIEDEIKSVMAQIDYVYKTFGFE 417

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPE  +G D LW+ AE  ++ VL ++           +  G+GAFYGPK ++
Sbjct: 418 Y-EVELSTRPEDSMGDDKLWEQAEASLENVLQSLNY------KYRLNEGDGAFYGPKIDF 470

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+ R  QCGTIQ+DF +P +F+  Y++  +EK  PV+IHRAV GS++RF+ I+IE+
Sbjct: 471 HIKDALNRSHQCGTIQLDFQMPEKFDLNYIDEKNEKKRPVVIHRAVLGSLDRFLAILIEH 530

Query: 542 FKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           F G  P W++P+Q  V  ++++  V+YA E+A+ L    + +E D R+E + YKIRE  +
Sbjct: 531 FGGAFPAWVAPVQVKVIPVSNAVHVQYADEVADKLTQAGVRVERDMRDEKLGYKIREAQM 590

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +K+P +++ GDKE    ++ +R++G   +  + L   +  + +E
Sbjct: 591 QKVPYVVVIGDKEMENGAVNVRKYGEEKSGVIELDMFVESMKEE 634


>gi|254487235|ref|ZP_05100440.1| threonyl-tRNA synthetase [Roseobacter sp. GAI101]
 gi|214044104|gb|EEB84742.1| threonyl-tRNA synthetase [Roseobacter sp. GAI101]
          Length = 648

 Score =  673 bits (1737), Expect = 0.0,   Method: Composition-based stats.
 Identities = 327/653 (50%), Positives = 433/653 (66%), Gaps = 10/653 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           + I LT PDG+ + +    T  DVA  IS+SL KKA++  +NG   DL+ P+  + SI I
Sbjct: 2   AQITLTLPDGNARQYDAGITAGDVANDISKSLGKKAISATVNGAHFDLAWPIDADASIAI 61

Query: 62  ITPEDPR-SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            T  D   +  ++RH  AHIMA AVQ IWP+ +V IGP+I+DG+YYDFD+ +PF+ ++L 
Sbjct: 62  HTMADEDQANELVRHDLAHIMARAVQEIWPDTKVTIGPVIKDGWYYDFDRAEPFTPEDLG 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEKKM+EII    P   +     +A + ++   E YKVE++ESIP  E + +Y  G+W 
Sbjct: 122 VIEKKMKEIINARDPVRTEVWDRPRAIKHYQDLDELYKVELIESIPGDEPLRMYWHGDWQ 181

Query: 181 DLCRGPHVRSTGQ-VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           DLCRGPH++ TGQ     FKLM +AGAYWRGDSNR ML RIYG A+  +++L  +L  LE
Sbjct: 182 DLCRGPHLQHTGQVPGDSFKLMSIAGAYWRGDSNRAMLQRIYGVAFTGKEKLRAHLNMLE 241

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQ 298
           E+ KRDHRKL REMDLFH+ E+  G +FWH  GW I+  L  YMRRK +   Y E+NTPQ
Sbjct: 242 EAAKRDHRKLGREMDLFHMQEEAPGQVFWHPNGWLIYTQLQDYMRRKQRAGGYVEVNTPQ 301

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHWD Y+ +MF V+  ++  ++    ALKPMNCP HV +FN G+KSYR+L
Sbjct: 302 VVDRKLWEKSGHWDKYQDHMFIVEVDEEHAREKSVNALKPMNCPCHVQIFNQGMKSYRDL 361

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFGS  R EPSG+LHG+MRVRGFTQDD H+FC ++Q+  E L     + +IYKD 
Sbjct: 362 PLRMAEFGSCNRYEPSGALHGIMRVRGFTQDDGHIFCREDQIEEETLIYIEFLSAIYKDL 421

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE   VK S RP+ R GSD +WD AE  +         + +  I   +  GEGAFYGPK
Sbjct: 422 GFENFKVKFSDRPDTRAGSDEVWDKAEAALLSA------TRKAGIEPEINPGEGAFYGPK 475

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E++L DAIGRDWQCGT QVDF LP R +A +V S   K  PVM+HRA  GS ERFIGI+
Sbjct: 476 LEFVLTDAIGRDWQCGTHQVDFVLPERLDATFVGSDGAKHRPVMLHRATLGSFERFIGIL 535

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE   G LP WL+P Q +V +ITS A +Y +E+   L +  +  E D RNE INYK+REH
Sbjct: 536 IEEHAGKLPFWLAPRQVVVASITSEADDYVREVIETLTAAGVRAEADTRNEKINYKVREH 595

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           S+ K+P+I+  G +E  E+++ +RR G   T   SL D    L  E+ PPD +
Sbjct: 596 SVGKVPVILAVGAREVEEKTVSVRRLGEKQTSVQSLADVAAALGIEATPPDLR 648


>gi|254441196|ref|ZP_05054689.1| threonyl-tRNA synthetase [Octadecabacter antarcticus 307]
 gi|198251274|gb|EDY75589.1| threonyl-tRNA synthetase [Octadecabacter antarcticus 307]
          Length = 649

 Score =  673 bits (1737), Expect = 0.0,   Method: Composition-based stats.
 Identities = 323/654 (49%), Positives = 439/654 (67%), Gaps = 10/654 (1%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
           M   I LTFPDG+ + +    T +DVA SI+ SLAKKA++  +NG+  D++ P+ + + I
Sbjct: 1   MAQQISLTFPDGNARQYDAGVTPADVAASIASSLAKKAISATVNGEHWDMAWPINDDAAI 60

Query: 60  EIITPEDPR-SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
            I T +D   ++ +IRH  AHIMA AVQ +WP+ QV IGP+I+DG+YYDFD+++ F+ D+
Sbjct: 61  AINTMKDAAPAVELIRHDLAHIMARAVQELWPDTQVTIGPVIKDGWYYDFDRKEAFTPDD 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L  IEKKM+EII +      +    E A + +E + E YK+E++  IP  E + +Y  G+
Sbjct: 121 LGTIEKKMKEIINKRDAVRTEVWDREVAIKYYEDRGEPYKIELINGIPGDEPLRMYWHGD 180

Query: 179 WFDLCRGPHVRSTGQ-VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           W DLCRGPH+++TGQ     +KLM +AGAYWRGDS+R ML RIYG A+  +++L  +L+ 
Sbjct: 181 WQDLCRGPHLQNTGQVPGDSWKLMSIAGAYWRGDSDRTMLQRIYGVAFQNKEQLKAHLHM 240

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINT 296
           LEE+ KRDHRKL REM+LFH+ E+ SG IFWH  GW IF  L  YMRRK +   Y E+NT
Sbjct: 241 LEEAAKRDHRKLGREMNLFHMQEEASGQIFWHPNGWLIFTQLQDYMRRKQRAGGYVEVNT 300

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           PQV+D+ LW+QSGHW+ ++ +MF V+  ++  ++    ALKPMNCP HV ++N GLKSYR
Sbjct: 301 PQVVDRKLWEQSGHWEKFQEHMFIVEVDEEHAREKAVNALKPMNCPCHVQIYNQGLKSYR 360

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +LPVR+AEFGS  R EPSG+LHG+MRVRGFTQDD H+FCT+EQ+  E +    L+  +Y+
Sbjct: 361 DLPVRMAEFGSCNRYEPSGALHGIMRVRGFTQDDGHIFCTEEQIEVETIAFIALLSEVYQ 420

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           D GF    VK S RP+ R GSD +WD      K     +  +    I   +  GEGAFYG
Sbjct: 421 DLGFSDFKVKFSDRPDVRSGSDEVWD------KAEAALLAATRAAGIEPTLNPGEGAFYG 474

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK E++L DAIGRDWQCGT QVDF LP R +A Y+ S  EK  PVM+HRA+ GS ERFIG
Sbjct: 475 PKLEFVLTDAIGRDWQCGTHQVDFVLPERLDANYIGSDGEKHRPVMLHRALLGSFERFIG 534

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           I+IE   G LP WL+P Q +V +I S A +Y +E+   L +  +  E D RNE INYK+R
Sbjct: 535 ILIEEHAGKLPFWLAPRQVVVASIISDADDYVREVVAALNAKGVRAEADIRNEKINYKVR 594

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDC 650
           EHS+ K+P+I+ CG +E  +R++ +RR G   T   +L   +  L   + PPD 
Sbjct: 595 EHSLGKVPVILACGAREVEDRTVSVRRLGEKQTSVTTLAAIVDDLQVSATPPDL 648


>gi|42781481|ref|NP_978728.1| threonyl-tRNA synthetase [Bacillus cereus ATCC 10987]
 gi|42737404|gb|AAS41336.1| threonyl-tRNA synthetase [Bacillus cereus ATCC 10987]
          Length = 640

 Score =  673 bits (1737), Expect = 0.0,   Method: Composition-based stats.
 Identities = 280/644 (43%), Positives = 431/644 (66%), Gaps = 17/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEII 62
            I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N  + DL   + E   +EII
Sbjct: 5   MIEIKFPDGSVKEFVKGITLEEIAGSISNSLKKKAVAGKVNDGLYDLRRNIEENAEVEII 64

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +    + + RHS AHI+A+AV+ ++ ++ + +GP+IE+GFYYD D     + ++L +I
Sbjct: 65  TIDSDEGVEIARHSAAHILAQAVKRLYGDINLGVGPVIENGFYYDMDLPSSVNIEDLRKI 124

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M++II  +    +  +S E+A +LF+   +  K+E+LE+IP+ E+VTLY+QGE+ DL
Sbjct: 125 EKEMKKIINENIKIERVEVSREEAAKLFQEMNDRLKLELLEAIPSGESVTLYKQGEFVDL 184

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ STG +K F     V+GAYWRGDSN  +L RIYG A+ +Q+EL +YL+F+EE+ 
Sbjct: 185 CRGPHLPSTGYLKAFQLTH-VSGAYWRGDSNNQVLQRIYGVAFASQKELEEYLHFVEEAA 243

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KR+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R  + +  Y+E+ TP +++
Sbjct: 244 KRNHRKLGSELELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYKYQEVRTPFMMN 303

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           Q LW++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R
Sbjct: 304 QELWEKSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIR 357

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           + EFG V+R+E SG+L+GL+RVR F QDDAH+F T EQ+ +E   +   I  +YK FGF+
Sbjct: 358 MCEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPEQIEDEIKSVMAQIDYVYKTFGFQ 417

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPE  +G D LW+ AE+ +  VL ++           +  G+GAFYGPK ++
Sbjct: 418 Y-EVELSTRPEDSMGDDKLWEQAESALANVLHSLNY------KYRLNEGDGAFYGPKIDF 470

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+ R  QCGTIQ+DF +P +F+  Y++  +EK  PV+IHRAV GS++RF+ I+IE+
Sbjct: 471 HIKDALNRSHQCGTIQLDFQMPEKFDLNYIDEKNEKKRPVVIHRAVLGSLDRFLAILIEH 530

Query: 542 FKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           F G  P W++P+Q  V  ++++  V+YA E+A+ L    + +E D R+E + YKIRE  +
Sbjct: 531 FGGAFPAWVAPVQVKVIPVSNAVHVQYADEVADKLAQAGVRVERDVRDEKLGYKIREAQM 590

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +KIP +++ GDKE    ++ +R++G   ++ V+L   +  + +E
Sbjct: 591 QKIPYVLVIGDKELENGAVNVRKYGGEKSEVVALDVFVSSIEEE 634


>gi|301053905|ref|YP_003792116.1| threonyl-tRNA synthetase [Bacillus anthracis CI]
 gi|300376074|gb|ADK04978.1| threonyl-tRNA synthetase [Bacillus cereus biovar anthracis str. CI]
          Length = 639

 Score =  673 bits (1737), Expect = 0.0,   Method: Composition-based stats.
 Identities = 278/644 (43%), Positives = 431/644 (66%), Gaps = 17/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEII 62
            I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N ++ DL   + E   +EII
Sbjct: 5   MIEIKFPDGSVKEFVKGITLEEIAGSISSSLKKKAVAGKVNDELYDLRRNIEENAEVEII 64

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +    + + RHS AHI+A+AV+ ++ ++ + +GP+IE+GFYYD D     + ++L +I
Sbjct: 65  TIDSNEGVEIARHSAAHILAQAVKRLYGDINLGVGPVIENGFYYDMDLPSSVNVEDLRKI 124

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M++II  +    +  +S E+A +LF+   +  K+E+LE+IP+ E+VTLY+QGE+ DL
Sbjct: 125 EKEMKKIINENIKVERVEVSREEAAKLFQEMNDRLKLELLEAIPSGESVTLYKQGEFVDL 184

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ STG +K F     V+GAYWRGDSN  +L RIYG A+++Q+EL +YL+F+EE+ 
Sbjct: 185 CRGPHLPSTGYLKAFQLTH-VSGAYWRGDSNNQVLQRIYGVAFSSQKELEEYLHFVEEAA 243

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KR+HRKL  E++LF  +E+  G+ F+  KG  I   L  ++R  + + +Y+E+ TP +++
Sbjct: 244 KRNHRKLGNELELFMFSEEAPGMPFYLPKGQIIRNELEVFLREIQKEYNYQEVRTPFMMN 303

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           Q +W++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R
Sbjct: 304 QEVWERSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIR 357

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           + EFG V+R+E SG+L+GL+RVR F QDDAH+F T EQ+ +E   +   I  +YK FGFE
Sbjct: 358 MCEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPEQIEDEIKSVMAQIDYVYKTFGFE 417

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPE  +G D LW+ AE  ++ VL ++           +  G+GAFYGPK ++
Sbjct: 418 Y-EVELSTRPEDSMGDDELWEQAEASLENVLQSLNY------KYRLNEGDGAFYGPKIDF 470

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+ R  QCGTIQ+DF +P +F+  Y++  +EK  PV+IHRAV GS++RF+ I+IE+
Sbjct: 471 HIKDALNRSHQCGTIQLDFQMPEKFDLNYIDEKNEKRRPVVIHRAVLGSLDRFLAILIEH 530

Query: 542 FKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           F G  P W++P+Q  V  ++++  V+YA E+A+ L    + +E D R+E + YKIRE  +
Sbjct: 531 FGGAFPAWVAPVQVKVIPVSNAVHVQYADEVADKLTQAGVRVERDMRDEKLGYKIREAQM 590

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +K+P +++ GDKE    ++ +R++G   +  + L   +  + +E
Sbjct: 591 QKVPYVLVIGDKEMENGAVNVRKYGEEKSGVIELDMFVESMKEE 634


>gi|85709956|ref|ZP_01041021.1| threonyl-tRNA synthetase [Erythrobacter sp. NAP1]
 gi|85688666|gb|EAQ28670.1| threonyl-tRNA synthetase [Erythrobacter sp. NAP1]
          Length = 671

 Score =  673 bits (1737), Expect = 0.0,   Method: Composition-based stats.
 Identities = 315/672 (46%), Positives = 434/672 (64%), Gaps = 23/672 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           M   +K++ PDGS++     +T +DVA +I   LAK A+A  ++G+V DL+ P   +  +
Sbjct: 1   MTELLKISLPDGSVREMEAGSTPADVAAAIGPGLAKAALAARVDGEVRDLNRPFEGDAEL 60

Query: 60  EIITPEDPR-SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE---QPFS 115
            +IT +D   +L + RH  AH++AEAVQ+++P  Q+  GP  +DGFYYD       +PFS
Sbjct: 61  ALITSKDEEEALELARHDYAHVLAEAVQALYPGTQITFGPATDDGFYYDVMAPASREPFS 120

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            D+L  IE+KM+EII  D P  ++  S ++  + +ES+ E++K E  + +P  E +T+Y 
Sbjct: 121 MDDLPAIEEKMREIIKADKPLRREVWSRQQLIDKWESEGESFKAEWAKELPENEELTVYW 180

Query: 176 QGE-WFDLCRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQ 233
            G+ W D+CRGPH+ STG++  + FKLM+VAGAYWRGD     L+RIYGT W  +++L  
Sbjct: 181 SGDDWLDMCRGPHLASTGKLDPQAFKLMRVAGAYWRGDQRNAQLTRIYGTGWLNKKQLNA 240

Query: 234 YLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YE 292
           +L+ LEE+ KRDHRKL REMDLFH+ E+  G +FWH KG++I++ L +YMRRK+    Y 
Sbjct: 241 HLHRLEEAAKRDHRKLGREMDLFHLQEEAHGSVFWHPKGYRIWRELEAYMRRKMDGGGYR 300

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT-------------IKDLRTFALKPM 339
           EI TPQ++D   W QSGHW  Y  NMFAV                     D    A+KPM
Sbjct: 301 EIKTPQLMDVRQWTQSGHWGKYAENMFAVPDIVPDVDDSGEAEASPKVADDADWMAIKPM 360

Query: 340 NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQ 399
           NCP HV VF  G+ SYR+LP+RL E G  +RNEP G+LHGLMRVR FTQDDAH+FCT++Q
Sbjct: 361 NCPAHVLVFKQGITSYRDLPIRLGEMGCCHRNEPHGALHGLMRVRQFTQDDAHIFCTEDQ 420

Query: 400 MFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSS 459
           +  E  K   L  S+Y+DFGF    VKL+ RPEKR GS+  WD AE  ++  +      +
Sbjct: 421 VVEEVRKFCALADSVYRDFGFSYH-VKLALRPEKRFGSEEDWDKAEQELRDAVAEAGMDN 479

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
           ++      L GEGAFY PK E+ L DAIGR WQ GTIQ D  LP R +A YV    EK  
Sbjct: 480 EEY-GWEELPGEGAFYAPKLEWHLTDAIGRTWQVGTIQGDRVLPDRLDATYVGEDGEKHR 538

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH 579
           PVM+HRA+FGS ERFIGI+IE+F G LP WL+P+QA+V TI S A +YA E    L++  
Sbjct: 539 PVMLHRAIFGSYERFIGILIEHFAGRLPSWLAPVQAVVATIVSDADDYANEATAKLQAAG 598

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
           + +E+D RNE INYK+REHS+ K+P +++ G +EA E ++ +R  G    + +SL +AI 
Sbjct: 599 IRVESDLRNEKINYKVREHSLAKVPHLLVVGKREAEEGTVAVRTLGEKEQRVMSLDEAIA 658

Query: 640 ILTKESLPPDCQ 651
           +L   + PPD +
Sbjct: 659 MLRDAATPPDLR 670


>gi|307545104|ref|YP_003897583.1| threonyl-tRNA synthetase [Halomonas elongata DSM 2581]
 gi|307217128|emb|CBV42398.1| threonyl-tRNA synthetase [Halomonas elongata DSM 2581]
          Length = 632

 Score =  673 bits (1737), Expect = 0.0,   Method: Composition-based stats.
 Identities = 311/641 (48%), Positives = 430/641 (67%), Gaps = 15/641 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS ++F    +   +AESI   LAK  VA  I+G++ D +D +  +  + IIT  
Sbjct: 4   VTLPDGSQRSFDEPLSIMQLAESIGTGLAKACVAGRIDGELVDAADIIDHDAEVAIITAR 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           DP  L +IRHSCAH++  AV+ ++P+ ++AIGP+IEDGFYYD D  +  + ++L  IE +
Sbjct: 64  DPEGLDIIRHSCAHLIGHAVKQLYPDAKMAIGPVIEDGFYYDIDFGRSITPEDLEAIEAR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+ +I      +++Y+  ++A   F  + E YK EI+  IP  E + LY   E+ D+CRG
Sbjct: 124 MKSLIETGYDVVREYVDRDRAMLTFLHRDEPYKQEIVREIPEGETIRLYHHQEYTDMCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +T  +K F KL K+AGAYWRGD+ RPML+RIYGTAW  +++L  YL  LEE+EKRD
Sbjct: 184 PHVPNTRHLKAF-KLTKLAGAYWRGDAERPMLTRIYGTAWGDKKQLKAYLKRLEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHL 304
           HRKLAR++DLFH+ E+  G++FWH +GW ++Q +  YMR+  KD  Y+EI  PQV+D  L
Sbjct: 243 HRKLARKLDLFHMQEEAPGMVFWHPRGWTLWQVVEQYMRQVYKDGGYQEIRCPQVMDVSL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHWD+Y   MF       T  + R +ALKPMNCPGHV VFN GL+SYRELPVR  E
Sbjct: 303 WKKSGHWDNYADGMFF------TESEKREYALKPMNCPGHVQVFNSGLRSYRELPVRYGE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FG  +RNEPSG+LHG+MRVR FTQDD HVFCT+EQ+  E    H   + +Y+DFGFE I 
Sbjct: 357 FGGCHRNEPSGALHGIMRVRAFTQDDGHVFCTEEQIEPEVTSFHRQALQVYRDFGFEDIA 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           VK++ RPEKR+G DA+WD AE  ++G L T        ++   L GEGAFYGPK EY +K
Sbjct: 417 VKIALRPEKRLGDDAVWDRAEEALRGALRTC------DVDWDELPGEGAFYGPKIEYHMK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D +GR+WQ GT+QVDF +P R  A YV    E+  PVM+HRA+ GS+ERFIGI+IE++ G
Sbjct: 471 DCLGREWQVGTMQVDFMMPVRLGAQYVAEDGERRSPVMLHRAIVGSMERFIGILIEHYAG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
            +PLWL+P QA+V TIT +  +YA  +   L+   L ++ D RNE I +KIREH+++K+P
Sbjct: 531 AMPLWLAPQQAVVLTITDAQRDYATYLEQRLQKKGLRVKADLRNEKIGFKIREHTLQKVP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
            +++ GDKE    S+ +R         +++   I  +  E 
Sbjct: 591 YLLVVGDKEVEADSVAVRSRSGEDLGTMTVDAFIDRIQAER 631


>gi|78048351|ref|YP_364526.1| threonyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|325927169|ref|ZP_08188432.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Xanthomonas
           perforans 91-118]
 gi|123743902|sp|Q3BRT7|SYT_XANC5 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|78036781|emb|CAJ24474.1| threonyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|325542482|gb|EGD13961.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Xanthomonas
           perforans 91-118]
          Length = 634

 Score =  673 bits (1737), Expect = 0.0,   Method: Composition-based stats.
 Identities = 291/644 (45%), Positives = 421/644 (65%), Gaps = 16/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +T PDGS + F    +   VA+SI   LAK  +A  ++G++ D SD +  + S+ II
Sbjct: 1   MINITLPDGSRREFESPVSVMQVAQSIGAGLAKATIAGQVDGQLVDASDVIDHDASLRII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   + +IRHSCAH++  AV+ ++PEV++ IGP+I +GFYYD   E+PF+ D++A I
Sbjct: 61  TAKDAEGVEIIRHSCAHLVGHAVKQLYPEVKMVIGPVIAEGFYYDIYSERPFTPDDMAAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-ENVTLYRQGEWFD 181
           E++MQE+IA+D   +K+     +  E+F  + E YK+ ++E +      + LY   E+ D
Sbjct: 121 EQRMQELIAQDYDVIKKVTPRAEVIEVFAQRGEEYKLRLIEDMSEDITAMGLYYHQEYVD 180

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           +CRGPHV +T  +K F KL +++GAYWRGD+    L RIYGTAW  +++L  Y+  +EE+
Sbjct: 181 MCRGPHVPNTRFLKAF-KLTRISGAYWRGDAKNEQLQRIYGTAWADKKQLDAYILRMEEA 239

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
           +KRDHR++ +  DLFH+ E+  G++FWH KGW ++Q +  YMR+  +D  Y E+  PQ+L
Sbjct: 240 DKRDHRRIGKAQDLFHLQEEAPGLVFWHPKGWSLWQVVEQYMRKVYRDSGYGEVRCPQIL 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D  LWQ+SGHWD+Y+  MF       T  + RT+A+KPMNCPGHV VFN GL SYR+LP+
Sbjct: 300 DVSLWQKSGHWDNYQDAMFF------TESEKRTYAVKPMNCPGHVQVFNQGLHSYRDLPI 353

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R  EFG+ +RNEPSG+LHG++RVRGFTQDD HVFC + Q+ +E    H   +++Y  FGF
Sbjct: 354 RYGEFGACHRNEPSGALHGILRVRGFTQDDGHVFCLESQIESEVTAFHQQALAVYTAFGF 413

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           + I +K++ RPEKR+G DA WD AE  ++  L          +    L GEGAFYGPK E
Sbjct: 414 DDIQIKIALRPEKRLGDDATWDKAEAALRSAL------GVCGVEWQELPGEGAFYGPKIE 467

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           Y LKDAIGR WQ GT+QVDF +P R  A YV+ +S+K HPVM+HRA+ GS+ERFIGI+IE
Sbjct: 468 YHLKDAIGRTWQLGTMQVDFMMPGRLGAEYVDENSQKKHPVMLHRAIVGSMERFIGILIE 527

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +  G  P WL+P+Q +V  IT +  EY   +   L +    +  D RNE I YKIREH++
Sbjct: 528 HHAGAFPSWLAPVQVVVANITDAQAEYVDSVRKTLANQGFRVSADLRNEKIGYKIREHTL 587

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +++P +++ GD+E    ++ +R         +++   I  L  E
Sbjct: 588 QRVPYLLVVGDREKENGAVAVRTRSGEDLGTMTVSAFIERLQAE 631


>gi|83954081|ref|ZP_00962801.1| threonyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1]
 gi|83841118|gb|EAP80288.1| threonyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1]
          Length = 649

 Score =  673 bits (1737), Expect = 0.0,   Method: Composition-based stats.
 Identities = 325/653 (49%), Positives = 435/653 (66%), Gaps = 10/653 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           + I LT PDG+ + +    T  DVA  IS+SL KKA++  ++G   DL+ P+  + SI I
Sbjct: 2   AQITLTLPDGNARQYDAGITAGDVANDISKSLGKKAISATVDGAHYDLAWPINADASIAI 61

Query: 62  ITPEDP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            T  D  ++  ++RH  AHIMA AVQ +WP+ +V IGP+I+DG+YYDFD+++ F+ ++L 
Sbjct: 62  HTMADEAQANELVRHDLAHIMARAVQELWPDTKVTIGPVIKDGWYYDFDRKESFTPEDLG 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEKKM+EII +  P   +    E+A + +E   E YKVE++ SIP  E + +Y  G+W 
Sbjct: 122 LIEKKMKEIINKRDPVRTEVWDRERAIKHYEDNGEPYKVELINSIPGDEPLRMYWHGDWQ 181

Query: 181 DLCRGPHVRSTGQ-VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           DLCRGPH++ TGQ     FKLM +AGAYWRGDS+R ML RIYG A+  +++L  +L  LE
Sbjct: 182 DLCRGPHLQHTGQVPGDAFKLMSIAGAYWRGDSDRAMLQRIYGVAFTGKEKLKAHLNMLE 241

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQ 298
           E+ KRDHRKL REMDL+H+ E+  G +FWH  GW I+  L  YMRRK +   Y E+NTPQ
Sbjct: 242 EAAKRDHRKLGREMDLYHMQEEAPGQVFWHANGWLIYTQLQDYMRRKQRAGGYVEVNTPQ 301

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW+ SGHW+ Y+ +MF V+  ++  ++    ALKPMNCP HV +FN GLKSYR+L
Sbjct: 302 VVDRKLWEASGHWEKYQDHMFIVEVDEEHAREKSVNALKPMNCPCHVQIFNQGLKSYRDL 361

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFGS  R EPSG+LHG+MRVRGFTQDD H+FC ++Q+  E  K    +  IYKD 
Sbjct: 362 PLRMAEFGSCNRYEPSGALHGIMRVRGFTQDDGHIFCAEDQIEAETAKFIEFLSGIYKDL 421

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE   VK S RPEKR GSD +WD AE  +      +  + +  I   +  GEGAFYGPK
Sbjct: 422 GFENFSVKFSDRPEKRSGSDEVWDKAEAAL------LSATRKAGIEPTLNPGEGAFYGPK 475

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E++L DAIGRDWQCGT QVDF LP R +A Y+ S   K  PVM+HRA  GS ERFIGI+
Sbjct: 476 LEFVLTDAIGRDWQCGTHQVDFVLPERLDATYIGSDGAKHRPVMLHRATLGSFERFIGIL 535

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE   G LP WL+P Q +V +ITS A +Y  E+   LK+  +  E D RNE INYK+REH
Sbjct: 536 IEEHAGKLPFWLAPRQVVVASITSEADDYVHEVVATLKAQGVRAEADIRNEKINYKVREH 595

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           S+ K+P+I+  G +E  E+++ +RR G   T   +L D    L  E+ PPD +
Sbjct: 596 SVGKVPVILAVGAREVEEKTVSVRRLGEKQTSVQALSDVANALGIEATPPDLR 648


>gi|114563199|ref|YP_750712.1| threonyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
 gi|122299726|sp|Q082E1|SYT_SHEFN RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|114334492|gb|ABI71874.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Shewanella
           frigidimarina NCIMB 400]
          Length = 642

 Score =  673 bits (1737), Expect = 0.0,   Method: Composition-based stats.
 Identities = 284/641 (44%), Positives = 417/641 (65%), Gaps = 16/641 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  DVA  I   LAK  +A  +NG++ D +D +  +  + IIT +
Sbjct: 4   ITLPDGSKREFANPVSTLDVALDIGPGLAKACIAGRVNGELKDATDLITADSELAIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   + ++RHSCAH++  A++ +WPE ++AIGP+I++GFYYD D +   + +++  +EK+
Sbjct: 64  DEEGVEILRHSCAHLLGHAIKQMWPETKMAIGPVIDNGFYYDIDLDHKLTHEDIEALEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M  +   +   +K+ +S ++AR+ F+ + E YK+ IL E+I       LY   E+ D+CR
Sbjct: 124 MLALAKTNYDVVKKVVSWQEARDAFDGRGEEYKIAILDENISKDATPALYHHEEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +    + F KLM VAGAYWRG+S+  ML R+YGTAW  ++ L  +L  LEE+ KR
Sbjct: 184 GPHVPNMRFCQNF-KLMSVAGAYWRGNSDNKMLQRVYGTAWADKKALKTHLVRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF  L  ++R+K+ +  Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWSIFLELEKFIRQKLGQYTYQEVKGPLMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWERSGHWDKYAEAMFT------TNSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFG  +RNEPSGSLHGLMRVRGFTQDDAHVFCT +Q+  E      ++   Y  FGF+ I
Sbjct: 357 EFGCCHRNEPSGSLHGLMRVRGFTQDDAHVFCTDDQVQEEVSACIQMVYDTYATFGFDNI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+G D +WD AE+ +K  L      + + I   +L GEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEKRIGDDDMWDRAEDALKQAL------ANNNIKYEILPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+D+ LP+R  A YV   + +  PVMIHRA+ GS+ERFIGI+IE + 
Sbjct: 471 HDCLDRAWQCGTVQLDYALPTRLGATYVAEDNSRQTPVMIHRAILGSLERFIGILIEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+Q +V  IT    +Y +EI    K   +    D RNE I +KIREH+++++
Sbjct: 531 GKFPTWLAPMQVVVMNITDKQADYVEEIVKFFKEQGIRASFDLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P +++ GD+E   + + +R        K+ L D   ++ ++
Sbjct: 591 PYLLVVGDQEMENKEVAVRTRDGIDLGKLKLEDFAAMIRQQ 631


>gi|260893515|ref|YP_003239612.1| threonyl-tRNA synthetase [Ammonifex degensii KC4]
 gi|260865656|gb|ACX52762.1| threonyl-tRNA synthetase [Ammonifex degensii KC4]
          Length = 637

 Score =  673 bits (1737), Expect = 0.0,   Method: Composition-based stats.
 Identities = 282/641 (43%), Positives = 411/641 (64%), Gaps = 15/641 (2%)

Query: 6   KLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITP 64
           K+  PDG  K FP  AT  DV   +     K+ +A  +NG + DLS P+  E  +E +T 
Sbjct: 3   KVILPDGEEKEFPEGATVKDVLALMPPEYQKRVLAAKVNGVLVDLSAPLPSEAKVEFLTF 62

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
            D     V  HS AHI+A+AV+ ++PE ++AIGP   +GFYYDFD   PFS ++L +IE 
Sbjct: 63  ADSEGKEVYWHSTAHILAQAVKRLYPEAKLAIGPPTANGFYYDFDVPTPFSPEDLERIEA 122

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
           +M+ II  + P +++ ++ E+AR  F S+ EAYKVE+++ +P +  +TLYRQGE+ DLCR
Sbjct: 123 EMKRIIEANLPIVREEIAREEARRFFASRGEAYKVELIDELPPEVPITLYRQGEFVDLCR 182

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPH+ STG VK F KL+ VAGAYWRGD    ML RIYG ++   +EL +YL  LEE+ +R
Sbjct: 183 GPHLPSTGYVKAF-KLLNVAGAYWRGDERNKMLQRIYGISFPEARELEEYLRRLEEARRR 241

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQH 303
           DHR+L +E+DLF   E+G G  F+H KG  +   L +  RR+  +  Y+EI TP +L + 
Sbjct: 242 DHRRLGQELDLFSFQEEGPGFPFFHPKGMIVRNELEALWRREHYRRGYQEIRTPILLKRE 301

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SGHWD Y+ NM+ ++       D + +A+KPMNCPG + ++   + SYRELP+RLA
Sbjct: 302 LWERSGHWDHYKENMYFLEI------DGQPYAVKPMNCPGAILIYQQRVHSYRELPLRLA 355

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           E G V+R+E SG LHGLMRVR FTQDDAH+FC ++Q+  E L I +L+   Y+       
Sbjct: 356 EMGLVHRHELSGVLHGLMRVRSFTQDDAHIFCREDQVKEEILGIIDLVDYFYRQVFGFPY 415

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            V+LSTRPEK +G D +W+ A + +K  L+      +      +  GEGAFYGPK ++ L
Sbjct: 416 HVELSTRPEKSMGDDHIWELATSALKEALE------ERGFAYKINEGEGAFYGPKIDFHL 469

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D +GR WQCGTIQ+DF +P +F+ FY+    ++  PVM+HR +FGS+ERF+ I+IE+F 
Sbjct: 470 EDCLGRTWQCGTIQLDFLMPEKFDLFYIGEDGQRHRPVMLHRVIFGSLERFMAILIEHFA 529

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  PLWL+P+Q  +  IT     YA++I  LL    L +E D RNE ++YK+RE  ++KI
Sbjct: 530 GAFPLWLAPVQVRILPITDRHHAYARQIYELLSRADLRVELDARNEKVSYKVREAQVQKI 589

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P +++ GDKE +  ++ +R         ++    +  + +E
Sbjct: 590 PYMLVIGDKEMNSGTVAVRHRSRGDLGAMTPEAFLEKVREE 630


>gi|237808486|ref|YP_002892926.1| threonyl-tRNA synthetase [Tolumonas auensis DSM 9187]
 gi|259516783|sp|C4LFH3|SYT_TOLAT RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|237500747|gb|ACQ93340.1| threonyl-tRNA synthetase [Tolumonas auensis DSM 9187]
          Length = 642

 Score =  673 bits (1736), Expect = 0.0,   Method: Composition-based stats.
 Identities = 299/647 (46%), Positives = 426/647 (65%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS + F    +  DVA SI   LAK  +A  +NG++ D  + +  + ++
Sbjct: 1   MPV---ITLPDGSQRQFENAVSVLDVAASIGAGLAKACIAGRVNGELVDACELIETDATL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L ++RHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D +Q  + +++
Sbjct: 58  SIITAKDQEGLEILRHSCAHLLGHAIKQLWPQTKMAIGPVIDNGFYYDVDLDQMLTEEDI 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +E +M E+  +D   +K+ +S ++AR++FES+ E YKV IL E+I   +   LY   E
Sbjct: 118 QALEARMLELAQKDYDVVKKTVSWQEARDVFESRSETYKVAILDENIARDDKPGLYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KL K +GAYWRGD+   ML RIYGTAW  +++L  YL  L
Sbjct: 178 YIDMCRGPHVPNMRFCHHF-KLQKTSGAYWRGDAKNKMLQRIYGTAWADKKQLNAYLQRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF+ L +++R+K+++ DYEE+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWIIFRELETFIRQKLREYDYEEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+
Sbjct: 297 FMMDRVLWERSGHWDKYADAMFT------TSSENREYAIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSGSLHGLMRVRGFTQDDAH+FC + Q+ +E      ++   Y  
Sbjct: 351 LPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCAENQIQDEVSACIRMVYDTYST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF+ I VKLSTRPEKR+GSD +WD AE  +   L        + I   +  GEGAFYGP
Sbjct: 411 FGFKNIAVKLSTRPEKRIGSDEMWDRAEEALSAALKH------NNIEFDLQPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF LP R  A YV   +++  PVMIHRA+ GS+ERFIGI
Sbjct: 465 KIEFTLHDCLDRAWQCGTVQLDFALPGRLGATYVGEDNDRHVPVMIHRAILGSMERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E   G  PLWL+P+QA+V  IT +  +Y +E+ N L    +  + D RNE I +KIRE
Sbjct: 525 LTEETAGYFPLWLAPLQAVVMNITDNQADYVKEVVNTLNESGIRAKADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H++K++P +++CGDKE     I +R        K  + D +  L KE
Sbjct: 585 HTLKRVPYMLVCGDKEMEAGEIAVRTRRGVDLGKFKVTDLVEQLRKE 631


>gi|271500480|ref|YP_003333505.1| threonyl-tRNA synthetase [Dickeya dadantii Ech586]
 gi|270344035|gb|ACZ76800.1| threonyl-tRNA synthetase [Dickeya dadantii Ech586]
          Length = 642

 Score =  673 bits (1736), Expect = 0.0,   Method: Composition-based stats.
 Identities = 296/647 (45%), Positives = 433/647 (66%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D  D +  +  +
Sbjct: 1   MPV---ITLPDGSQRHYDHAVSPLDVALDIGPGLAKACIAGRVNGELVDAVDVIESDAQL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   + +IRHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D E   + ++L
Sbjct: 58  AIITAKDDVGMEIIRHSCAHLLGHAIKQLWPDTKMAIGPVIDNGFYYDVDLEHTLTQEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M E+  +D   +K+ +S ++AR+ F ++ E+YKV IL E+I   +   LY   E
Sbjct: 118 ELLEKRMHELAGKDYDVIKKKVSWQEARDTFAARGESYKVAILDENISHDDRPGLYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KL K +GAYWRGDS   ML RIYGTAW  +++L+ YL  L
Sbjct: 178 YIDMCRGPHVPNMRFCHHF-KLQKTSGAYWRGDSKNKMLQRIYGTAWADKKQLSAYLQRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF+ L +++R K+K+  Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEAFVRMKLKEYQYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW+++GHW++Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 297 FMMDRVLWEKTGHWENYKEAMFT------TSSENREYCVKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  
Sbjct: 351 LPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQVRDEVNSCIKMVYDMYST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI+VKLSTRPEKR+GSD +WD AE  +   L      +++ I      GEGAFYGP
Sbjct: 411 FGFEKIVVKLSTRPEKRIGSDDMWDRAEEDLAAAL------TENAIPFEYQPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF+LP R +A YV  ++E+  PVMIHRA+ GS+ERFIGI
Sbjct: 465 KIEFTLHDCLDRAWQCGTVQLDFSLPGRLSASYVGENNERQVPVMIHRAILGSMERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E F G  P WL+P+QA+V  IT S  +Y  E+   L+   + ++ D RNE I +KIRE
Sbjct: 525 LTEEFAGFFPTWLAPVQAVVMNITDSQSDYVSELTRKLQDAGIRVKADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H+++++P +++CGDKE     + +R         + + + I  L +E
Sbjct: 585 HTLRRVPYMLVCGDKEVEAGKVAVRTRRGKDLGSMDVSEVITKLQEE 631


>gi|229091361|ref|ZP_04222576.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-42]
 gi|228691990|gb|EEL45732.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-42]
          Length = 639

 Score =  673 bits (1736), Expect = 0.0,   Method: Composition-based stats.
 Identities = 280/644 (43%), Positives = 433/644 (67%), Gaps = 17/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEII 62
            I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N ++ DL   + E   +EII
Sbjct: 5   MIEIKFPDGSVKEFVKGITLEEIAGSISSSLKKKAVAGNVNDELYDLRRNIEENAEVEII 64

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +    + + RHS AHI+A+AV+ ++ ++ + +GP+IE+GFYYD D     + ++L +I
Sbjct: 65  TIDSNEGVEIARHSAAHILAQAVKRLYGDINLGVGPVIENGFYYDMDLPSSVNVEDLRKI 124

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M++II  +    +  +S E+A +LF+   +  K+E+LE+IP+ E+VTLY+QGE+ DL
Sbjct: 125 EKEMKKIINENIKIERVEVSREEAAKLFQEMNDRLKLELLEAIPSGESVTLYKQGEFVDL 184

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ STG +K F     V+GAYWRGDSN  +L RIYG A+++Q+EL +YL+F+EE+ 
Sbjct: 185 CRGPHLPSTGYLKAFQLTH-VSGAYWRGDSNNQVLQRIYGVAFSSQKELEEYLHFVEEAA 243

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KR+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R  + + +Y+E+ TP +++
Sbjct: 244 KRNHRKLGNELELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMN 303

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           Q +W++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R
Sbjct: 304 QEVWERSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIR 357

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           + EFG V+R+E SG+L+GL+RVR F QDDAH+F T EQ+ +E   +   I  +YK FGFE
Sbjct: 358 MCEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPEQIEDEIKSVMAQIDYVYKTFGFE 417

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPE  +G D LW+ AE  ++ VL ++           +  G+GAFYGPK ++
Sbjct: 418 Y-EVELSTRPEDSMGDDKLWEQAEASLENVLQSLNY------KYRLNEGDGAFYGPKIDF 470

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+ R  QCGTIQ+DF +P +F+  Y++  +EK  PV+IHRAV GS++RF+ I+IE+
Sbjct: 471 HIKDALNRSHQCGTIQLDFQMPEKFDLNYIDEKNEKKRPVVIHRAVLGSLDRFLAILIEH 530

Query: 542 FKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           F G  P W++P+Q  V  ++++  V+YA E+A+ L    + +E D R+E + YKIRE  +
Sbjct: 531 FGGAFPTWVAPVQVKVIPVSNAVHVQYADEVADKLAQAGVRVERDMRDEKLGYKIREAQM 590

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +KIP +++ GDKE    ++ +R++G   ++ V L   +  + +E
Sbjct: 591 QKIPYVLVIGDKEMENGAVNVRKYGEEKSEVVELNGFVESMKEE 634


>gi|255654593|ref|ZP_05400002.1| threonyl-tRNA synthetase [Clostridium difficile QCD-23m63]
          Length = 639

 Score =  673 bits (1736), Expect = 0.0,   Method: Composition-based stats.
 Identities = 278/643 (43%), Positives = 404/643 (62%), Gaps = 16/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+   DGSIK F    +  DVA+SIS  LA+  VA ++NG+V  L   +  +  + + 
Sbjct: 1   MIKVALKDGSIKEFENAISVMDVAKSISEGLARNVVAASVNGEVVGLDHIIDTDCDLNLF 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
             ED     V RH+ AHI+A+A++ ++PE ++AIGP IE+GFYYD D +     ++L +I
Sbjct: 61  KFEDKEGKEVFRHTSAHILAQAIKRLYPEAKLAIGPSIENGFYYDIDLDHRLVPEDLEKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M++I   D    +  L   +A EL + + E YKVE++  +P  E ++ Y+QG++ DL
Sbjct: 121 EAEMKKIAKEDLKIERFELPRNEALELMKEQGEDYKVELISDLPESEIISFYKQGDFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ ST +VK   KL  VAGAYWRGD N  ML RIYGT++   ++L +YL+ LEE++
Sbjct: 181 CRGPHLPSTKKVK-AVKLQSVAGAYWRGDENNKMLQRIYGTSFEKNKDLEEYLHLLEEAK 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KRDHRKL +E+ LF I E+G G   +  KG ++   L+ + R    K  Y EI +P +L+
Sbjct: 240 KRDHRKLGKELGLFMIPEEGPGFPMFLPKGMELKNELLKFWREIHRKAGYIEIESPIILN 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW  Y+ NM+ VK       D   +A+KPMNCPG +  +N  L SYR+ P+R
Sbjct: 300 RKLWETSGHWYHYKENMYTVKI------DDEDYAIKPMNCPGGLIYYNSQLHSYRDFPMR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AE G V+R+E SG+L GLMRVR FTQDD+H+F   EQ+ +E   + NLI  IYK FGFE
Sbjct: 354 VAELGRVHRHELSGALQGLMRVRAFTQDDSHIFMLPEQIKDEIKGVANLIDGIYKTFGFE 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
             + +LSTRPE  +GS+  W+ AEN ++  L+ +       +   +  G+GAFYGPK ++
Sbjct: 414 YNL-ELSTRPENSMGSNEEWEAAENGLREALEELG------LPYTINEGDGAFYGPKIDF 466

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            LKD +GR WQCGTIQ+D  LP +F+  Y+    EK  PVMIHR  FGSIERFIGI+IE+
Sbjct: 467 HLKDCLGRTWQCGTIQLDMQLPRQFDNTYIGQDGEKHRPVMIHRVAFGSIERFIGILIEH 526

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  P+WLSP Q  +  I+   ++YA E+   L    + +E D R E I +KIRE  ++
Sbjct: 527 YAGKFPVWLSPTQVKILPISDKFMDYANEVKKELFDKGIRVELDDRAEKIGFKIREAQLE 586

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K+P ++I G+KE ++ ++ +R         + L + I  ++KE
Sbjct: 587 KVPYMLIVGEKEVADNNVSVRSRDKGEIGSIKLDEFIASISKE 629


>gi|255659698|ref|ZP_05405107.1| threonine--tRNA ligase [Mitsuokella multacida DSM 20544]
 gi|260848272|gb|EEX68279.1| threonine--tRNA ligase [Mitsuokella multacida DSM 20544]
          Length = 639

 Score =  673 bits (1736), Expect = 0.0,   Method: Composition-based stats.
 Identities = 276/645 (42%), Positives = 410/645 (63%), Gaps = 18/645 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            +K+T  DG+++      +  D  + +S SLAKK +A  ++G+  DL+  + ++  +E +
Sbjct: 1   MLKITMKDGAVREAEAGISIQDFVKQVSNSLAKKVLAAKVDGETKDLTTVLDKDCKVEFL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWP--EVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           T +D      +RH+ +HI+A+AV+ ++    V++AIGP I++GFYYDFD ++  +  +LA
Sbjct: 61  TFDDEDGRWALRHTASHILAQAVKRLYKAANVRLAIGPAIDNGFYYDFDIDRQLTEADLA 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEK+M++I+  +    ++ +S E+A + FE K E YKVE++  +P  E +T+Y QGE+ 
Sbjct: 121 DIEKEMKKIVKENLKLERKEVSREEALQFFEEKGETYKVELINDLPEGEKITMYTQGEFT 180

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLC GPHV STG+VK   KLM +AGAYWRGD +  ML RIYGTA+  Q +L  YL+ LEE
Sbjct: 181 DLCAGPHVVSTGKVK-ALKLMSIAGAYWRGDEHNKMLQRIYGTAFEKQADLDAYLHMLEE 239

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           ++KRDHRKL +++DLF + E+G G  F+H  G  +   LI+Y R    +  Y+EI TP +
Sbjct: 240 AKKRDHRKLGKQLDLFSLHEEGPGFPFFHPNGMIVRNELINYWRDVHRRYGYQEIKTPII 299

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           L++ LW+ SGHWD Y+ NM+  K       D   +A+KPMNCPG + V+N    SYR+LP
Sbjct: 300 LNRQLWETSGHWDHYKENMYFTKI------DGEDYAIKPMNCPGGMLVYNSKQHSYRDLP 353

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +RL E G V+R+E SG LHGL RVR FTQDDAH+F T +Q+  E     +L   +Y  FG
Sbjct: 354 LRLGELGLVHRHEKSGELHGLFRVRNFTQDDAHLFVTPDQVEQEIQHTIDLFDEVYNTFG 413

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
              +  +LSTRP+  +G+D  W+ A N ++  L+         ++  V  G+GAFYGPK 
Sbjct: 414 LTYVA-ELSTRPDDSMGTDEDWELATNGLRKALEH------RGLDYIVNEGDGAFYGPKI 466

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           ++ LKD+IGR WQCGTIQ D  +P +FN  YV    EK  P+M+HR V+GSIERFIGI+I
Sbjct: 467 DFHLKDSIGRTWQCGTIQYDMQMPEKFNLTYVGEDGEKHRPIMLHRVVYGSIERFIGILI 526

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           EN+ G  P WL+P+QA +  IT    +YA E+   +    L IE D R+E I  KIRE  
Sbjct: 527 ENYAGAFPTWLAPVQARILPITDKQADYAYELRKKMFDLGLRIEVDDRSEKIGKKIRESQ 586

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           + K P  ++ GD+E ++ ++ +R++G   ++ + + D I  L ++
Sbjct: 587 MLKTPYSLVVGDQEMADGTVAVRKYGEQQSETMKVEDFIAYLQEQ 631


>gi|332558829|ref|ZP_08413151.1| threonyl-tRNA synthetase [Rhodobacter sphaeroides WS8N]
 gi|332276541|gb|EGJ21856.1| threonyl-tRNA synthetase [Rhodobacter sphaeroides WS8N]
          Length = 646

 Score =  673 bits (1736), Expect = 0.0,   Method: Composition-based stats.
 Identities = 320/650 (49%), Positives = 438/650 (67%), Gaps = 10/650 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           + I LTFPDG  + FP   T ++VA SIS SL KKA++ +++G+  DL  P+  +  I I
Sbjct: 2   AQISLTFPDGKAREFPAGITPAEVAASISTSLGKKAISASVDGRHYDLQWPIETDAKIAI 61

Query: 62  ITPEDP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            T  D  ++L +IRH  AHIMA AVQ +WP+V+V IGP++ +G+YYDFD+++ F+ ++L 
Sbjct: 62  HTMADEAQALELIRHDLAHIMARAVQELWPDVKVTIGPVVANGWYYDFDRDETFTPEDLG 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEK+M+EII        +     +A   +E + E +KVE++++IP  +++ +Y  G W 
Sbjct: 122 AIEKRMKEIINAREAVKTELWERARAIAYYEERGEPFKVELVQAIPEDQSIRMYWHGGWQ 181

Query: 181 DLCRGPHVRSTGQ-VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           DLCRGPH++ TGQ     FKLM VAGAYWRGDS    L RIYG A+ T+ EL  YL+ LE
Sbjct: 182 DLCRGPHLQHTGQVPADAFKLMSVAGAYWRGDSANKQLQRIYGVAFKTRDELKAYLHMLE 241

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQ 298
           E+ KRDHRKL REM+LFH+ E+  G++FWH  GW+I++TL  YMR R  +  Y+EI TPQ
Sbjct: 242 EAAKRDHRKLGREMELFHLQEEAPGMVFWHPNGWQIYRTLEDYMRGRLRQAGYKEIRTPQ 301

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW+ SGHW++Y+ NMF V+  ++  K+ R  ALKPMNCP HV V+N GLKSYR+L
Sbjct: 302 VVDRKLWEASGHWEAYKENMFIVEVEEEHAKEKRINALKPMNCPCHVQVYNQGLKSYRDL 361

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFGS +R E SGS+HGLMRVRGF QDDAH+FCT++Q+ +EC     L+ S+YKD 
Sbjct: 362 PLRLAEFGSCHRYESSGSMHGLMRVRGFVQDDAHIFCTEDQIESECAAFIELLSSVYKDL 421

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+   +KLSTRPE R+GSD  WD  E  ++  +  +  +        +  GEGAFYGPK
Sbjct: 422 GFDSFEIKLSTRPEVRIGSDEAWDKVETALENAIKKVGAA------YEIDPGEGAFYGPK 475

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++ L DAIGR WQCGT QVD NLP+R  A Y+     K  P M+HRA+ GS ERFIGI+
Sbjct: 476 LDFKLTDAIGRKWQCGTFQVDPNLPTRLGAEYIGEDGAKHRPYMLHRAILGSFERFIGIL 535

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IEN+ G LP WL+P Q +V +I S A  Y  E+   L++  +  E D RNE INYK+REH
Sbjct: 536 IENYAGKLPFWLAPRQVVVASIVSDADPYVAEVVAALRARGVRAEADTRNEKINYKVREH 595

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
           S+ K+P+I+  G +E   RS+ +RR G T T+ + L   +  L  ++  P
Sbjct: 596 SVGKVPVILAIGMQEVEARSVSVRRLGETRTESMGLDQVVDQLAADARIP 645


>gi|299822779|ref|ZP_07054665.1| threonine--tRNA ligase [Listeria grayi DSM 20601]
 gi|299816308|gb|EFI83546.1| threonine--tRNA ligase [Listeria grayi DSM 20601]
          Length = 640

 Score =  673 bits (1736), Expect = 0.0,   Method: Composition-based stats.
 Identities = 269/648 (41%), Positives = 413/648 (63%), Gaps = 20/648 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           +K+TFPDG++K F    + +D+A SIS  L KKA+A  ING++ DL+ P+  +G IEI+T
Sbjct: 1   MKITFPDGAVKEFDKGVSTADIAASISPGLKKKALAGKINGELVDLATPIEEDGKIEIVT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+   +L ++RHS AH++A+A++ ++P+++  +GP IE GFYYD D E+P S +    IE
Sbjct: 61  PDHEDALGILRHSTAHLLAQALKRLYPDIKFGVGPAIETGFYYDVDTEEPISEESFPVIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+MQ+I+  + P +++ +S E+A + FE+  + YK+E++E+IPA E VT+Y QGE+FDLC
Sbjct: 121 KEMQKIVRENLPIVREVVSREEAIKRFEAIGDHYKLELIEAIPADETVTIYSQGEFFDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RG HV STG+++ F  L  VAGAYWRGDSN  ML RIYGTA+  +++L  +L   EE+++
Sbjct: 181 RGIHVPSTGKLQVFQLL-NVAGAYWRGDSNNKMLQRIYGTAFFDKKDLKAFLKMQEEAKE 239

Query: 244 RDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLD 301
           RDHRKL +E+ LF I+++   G+  W  KG  I + +  Y+  R+ +  Y  + TP +  
Sbjct: 240 RDHRKLGKELGLFAISQEVGQGLPLWLPKGATIRRVIERYIVDREERLGYSHVYTPIMAK 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
              ++QSGHWD Y  +MF     D+         L+PMNCP H+ V+ + + SYRELP+R
Sbjct: 300 VDFYKQSGHWDHYHEDMFPPMKMDN-----EELVLRPMNCPHHMMVYKNDIHSYRELPIR 354

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AE G ++R E SG+L GL RVRG T +DAHVF   +Q+ +E  ++  LI+++YKDF   
Sbjct: 355 IAELGLMHRYEMSGALSGLQRVRGMTLNDAHVFVRPDQIKDEFKRVLELILAVYKDFDIT 414

Query: 422 KIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
               +LS R      K    DA+W+ A+ ++K  +D ++      ++     GE AFYGP
Sbjct: 415 DYKFRLSYRDPENTEKYFDDDAMWEKAQTMLKDAMDEME------MDYFEAEGEAAFYGP 468

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  +K AIG++    T+Q+DF LP RF+  Y+    EK  PV+IHR V  ++ERF+  
Sbjct: 469 KLDVQVKTAIGKEETLSTVQLDFLLPERFDLTYIGEDGEKHRPVVIHRGVVSTMERFVAY 528

Query: 538 MIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +IE +KG  P WL+PIQ  +  +   +  +YA+E+ + L    L +E D RNE + YKIR
Sbjct: 529 LIEEYKGAFPTWLAPIQMQIIPVNRDAHFDYAKEVEDKLVRAGLRVEIDDRNEKLGYKIR 588

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           E   +KIP  ++ GD+E+   ++ IRR+GS  ++ +S+ D I  +  E
Sbjct: 589 EAQTQKIPYALVVGDQESENGTVNIRRYGSKDSETLSVDDFIKQVVAE 636


>gi|289668713|ref|ZP_06489788.1| threonyl-tRNA synthetase [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 634

 Score =  673 bits (1736), Expect = 0.0,   Method: Composition-based stats.
 Identities = 290/644 (45%), Positives = 421/644 (65%), Gaps = 16/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +T PDGS + F    +   VA+SI   LAK  +A  ++G++ D SD +  + S+ II
Sbjct: 1   MINITLPDGSRREFESPVSVMQVAQSIGAGLAKATIAGQVDGQLVDASDVIDHDASLRII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   + +IRHSCAH++  AV+ ++PEV++ IGP+I +GFYYD   E+PF+ +++A I
Sbjct: 61  TAKDAEGVEIIRHSCAHLVGHAVKQLYPEVKMVIGPVIAEGFYYDIYSERPFTPEDMAVI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-ENVTLYRQGEWFD 181
           E++MQE+IA+D   +K+     +  E+F  + E YK+ ++E +      + LY   E+ D
Sbjct: 121 EQRMQELIAQDYDVIKKVTPRAEVIEVFAQRGEEYKLRLIEDMSEDITAMGLYYHQEYVD 180

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           +CRGPHV +T  +K F KL +++GAYWRGD+    L RIYGTAW  +++L  Y+  +EE+
Sbjct: 181 MCRGPHVPNTRFLKAF-KLTRISGAYWRGDAKNEQLQRIYGTAWADKKQLDAYILRMEEA 239

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
           +KRDHR++ R  DLFH+ E+  G++FWH KGW ++Q +  YMR+  +D  Y E+  PQ+L
Sbjct: 240 DKRDHRRIGRAQDLFHLQEEAPGLVFWHPKGWSLWQVVEQYMRKVYRDSGYGEVRCPQIL 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D  LWQ+SGHWD+Y+  MF       T  + RT+A+KPMNCPGHV VFN GL SYR+LP+
Sbjct: 300 DVSLWQKSGHWDNYQDAMFF------TESEKRTYAVKPMNCPGHVQVFNQGLHSYRDLPI 353

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R  EFG+ +RNEPSG+LHG++RVRGFTQDD HVFC + Q+ +E    H   +++Y  FGF
Sbjct: 354 RYGEFGACHRNEPSGALHGILRVRGFTQDDGHVFCLESQIESEVTAFHQQALAVYTAFGF 413

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           + I +K++ RPEKR+G DA WD AE  ++  L          +    L GEGAFYGPK E
Sbjct: 414 DDIQIKIALRPEKRLGDDATWDKAEAALRSAL------GVCGVEWQELPGEGAFYGPKIE 467

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           Y LKDAIGR WQ GT+QVDF +P R  A YV+ +S+K HPVM+HRA+ GS+ERFIGI+IE
Sbjct: 468 YHLKDAIGRTWQLGTMQVDFMMPGRLGAEYVDENSQKKHPVMLHRAIVGSMERFIGILIE 527

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +  G  P WL+P+Q +V  IT +  EY   +   L +    +  D RNE I YKIREH++
Sbjct: 528 HHAGAFPSWLAPVQVVVVNITDAQAEYVDSVRKTLANQGFRVSADLRNEKIGYKIREHTL 587

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +++P +++ GD+E    ++ +R         +++   +  L  E
Sbjct: 588 QRVPYLLVVGDREKENGAVAVRTRSGEDLGTMTVSAFVERLQAE 631


>gi|238765296|ref|ZP_04626223.1| Threonyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
 gi|238696469|gb|EEP89259.1| Threonyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
          Length = 642

 Score =  673 bits (1735), Expect = 0.0,   Method: Composition-based stats.
 Identities = 290/647 (44%), Positives = 428/647 (66%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS + +    +  DVA  I   LAK  +A  +NG++ D  D +  +  +
Sbjct: 1   MPV---ITLPDGSQRQYDRAVSVLDVALDIGPGLAKACIAGRVNGELVDAGDLIESDAQL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L ++RHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D ++  + ++L
Sbjct: 58  AIITAKDAEGLEILRHSCAHLLGHAIKQLWPDTKMAIGPVIDNGFYYDVDIDRTLTQEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M E+  +D   +K+ +S ++AR+ F ++ E YKV IL E+I   +   LY   E
Sbjct: 118 DLLEKRMHELADKDYDVIKKKVSWQEARDTFAARGEDYKVAILDENISRDDRPGLYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KL K +GAYWRGDS   ML RIYGTAW  +++L  YL  L
Sbjct: 178 YVDMCRGPHVPNMRFCHHF-KLQKTSGAYWRGDSKNKMLQRIYGTAWGDKKQLNAYLQRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF+ L +++R K+K+  Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELETFVRMKLKEYQYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW+++GHW++Y  +MF       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 297 FMMDRVLWEKTGHWENYAEHMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  
Sbjct: 351 LPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQVRDEVNSCIKMVYDMYST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI+VKLSTRPEKR+GSD LW  AE+ +   L      +++ I      GEGAFYGP
Sbjct: 411 FGFEKIVVKLSTRPEKRIGSDDLWTRAEDDLAAAL------TENGIPFDYQPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF+LP R +A Y+  ++++  PVMIHRA+ GS+ERFIGI
Sbjct: 465 KIEFTLHDCLDRAWQCGTVQLDFSLPGRLSASYIGENNDRQVPVMIHRAILGSMERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E + G  P WL+P+Q +V  IT S  +Y Q++   L+   +  + D RNE I +KIRE
Sbjct: 525 LTEEYAGFFPTWLAPVQVVVMNITDSQSDYVQQVTKKLQDAGIRAKADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H+++++P +++CGDKE     I +R         + +   +  L  E
Sbjct: 585 HTLRRVPYMLVCGDKEVESGKIAVRTRRGKDLGSLDVNVVVDQLLAE 631


>gi|118477787|ref|YP_894938.1| threonyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|229184596|ref|ZP_04311798.1| Threonyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
 gi|118417012|gb|ABK85431.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Bacillus
           thuringiensis str. Al Hakam]
 gi|228598913|gb|EEK56531.1| Threonyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
          Length = 639

 Score =  673 bits (1735), Expect = 0.0,   Method: Composition-based stats.
 Identities = 278/644 (43%), Positives = 432/644 (67%), Gaps = 17/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEII 62
            I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N ++ DL   + E   +EII
Sbjct: 5   MIEIKFPDGSVKEFVKGITLEEIAGSISSSLKKKAVAGKVNDELYDLRRNIEENAEVEII 64

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +    + + RHS AHI+A+AV+ ++ ++ + +GP+IE+GFYYD D     + ++L +I
Sbjct: 65  TIDSNEGVEIARHSAAHILAQAVKRLYGDINLGVGPVIENGFYYDMDFPSSVNVEDLRKI 124

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M++II  +    +  +S E+A +LF+   +  K+E+LE+IP+ E+VTLY+QGE+ DL
Sbjct: 125 EKEMKKIINENIKIERVEVSREEAAKLFQEMNDRLKLELLEAIPSGESVTLYKQGEFVDL 184

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ STG +K F     V+GAYWRGDSN  +L RIYG A+++Q+EL +YL+F+EE+ 
Sbjct: 185 CRGPHLPSTGYLKAFQLTH-VSGAYWRGDSNNQVLQRIYGVAFSSQKELEEYLHFVEEAA 243

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KR+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R  + + +Y+E+ TP +++
Sbjct: 244 KRNHRKLGNELELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMN 303

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           Q +W++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R
Sbjct: 304 QEVWERSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIR 357

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           + EFG V+R+E SG+L+GL+RVR F QDDAH+F T EQ+ +E   +   I  +YK FGFE
Sbjct: 358 MCEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPEQIEDEIKSVMAQIDYVYKTFGFE 417

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPE  +G D LW+ AE  ++ VL ++           +  G+GAFYGPK ++
Sbjct: 418 Y-EVELSTRPEDSMGDDKLWEQAEASLENVLQSLNY------KYRLNEGDGAFYGPKIDF 470

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+ R  QCGTIQ+DF +P +F+  Y++  +EK  PV+IHRAV GS++RF+ I+IE+
Sbjct: 471 HIKDALNRSHQCGTIQLDFQMPEKFDLNYIDEKNEKKRPVVIHRAVLGSLDRFLAILIEH 530

Query: 542 FKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           F G  P W++P+Q  V  ++++  V+YA E+A+ L    + +E D R+E + YKIRE  +
Sbjct: 531 FGGAFPAWVAPVQVKVIPVSNAVHVQYADEVADKLAQAGVRVERDMRDEKLGYKIREAQM 590

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +K+P +++ GDKE    ++ +R++G   +  + L   +  + +E
Sbjct: 591 QKVPYVLVIGDKEMENGAVNVRKYGEEKSGVIELDMFVESMKEE 634


>gi|238783384|ref|ZP_04627407.1| Threonyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
 gi|238715629|gb|EEQ07618.1| Threonyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
          Length = 642

 Score =  673 bits (1735), Expect = 0.0,   Method: Composition-based stats.
 Identities = 292/647 (45%), Positives = 429/647 (66%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D SD +  +  +
Sbjct: 1   MPV---ITLPDGSQRHYDHAVSALDVALDIGPGLAKACIAGRVNGELVDASDLIESDAQL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L ++RHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D ++  + ++L
Sbjct: 58  AIITTKDAEGLEILRHSCAHLLGHAIKQLWPDTKMAIGPVIDNGFYYDVDIDRTLTQEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M E+  +D   +K+ +S ++AR+ F ++ E YKV IL E+I   +   LY   E
Sbjct: 118 DLLEKRMHELADKDYDVIKKKVSWQEARDTFAARGEDYKVAILDENISRDDRPGLYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KL K +GAYWRGDS   ML RIYGTAW  +++L  YL  L
Sbjct: 178 YVDMCRGPHVPNMRFCHHF-KLQKTSGAYWRGDSKNKMLQRIYGTAWGDKKQLNAYLQRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF+ L +++R K+K+  Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELETFVRMKLKEYQYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW+++GHW++Y  +MF       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 297 FMMDRVLWEKTGHWENYAEHMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+RLAEFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  
Sbjct: 351 LPLRLAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQVRDEVNSCIKMVYDMYST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI+VKLSTRPEKR+GSD  W  AE+ +   L      +++ I      GEGAFYGP
Sbjct: 411 FGFEKIVVKLSTRPEKRIGSDEQWTRAESDLAAAL------TENGIPFDYQPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF+LP R +A Y+  ++++  PVMIHRA+ GSIERFIGI
Sbjct: 465 KIEFTLHDCLDRAWQCGTVQLDFSLPGRLSASYIGENNDRQVPVMIHRAILGSIERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E + G  P WL+P+Q +V  IT S  +Y Q++   L+   +  + D RNE I +KIRE
Sbjct: 525 LTEEYAGFFPTWLAPVQVVVMNITDSQSDYVQQVTKKLQDAGIRAKADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H+++++P +++CGDKE     I +R         + +   +  L  E
Sbjct: 585 HTLRRVPYMLVCGDKEVESGKIAVRTRRGKDLGSLDVNVVVDQLLAE 631


>gi|296536619|ref|ZP_06898695.1| threonine--tRNA ligase [Roseomonas cervicalis ATCC 49957]
 gi|296263053|gb|EFH09602.1| threonine--tRNA ligase [Roseomonas cervicalis ATCC 49957]
          Length = 660

 Score =  673 bits (1735), Expect = 0.0,   Method: Composition-based stats.
 Identities = 323/653 (49%), Positives = 444/653 (67%), Gaps = 12/653 (1%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP+   +T PD S++ F    TG+ VA +I   LAK A+A+ ++G++ DLS  +  + +I
Sbjct: 1   MPA---ITLPDQSVRVFDEAVTGTTVAAAIGPGLAKAAIAMQVDGQLRDLSHVIEGDAAI 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
             IT +DP +L +IRH  AH++AEAVQ ++P  QV IGP IE+GFYYDF + +PF+ ++ 
Sbjct: 58  RFITRKDPEALELIRHDAAHVLAEAVQELFPGTQVTIGPAIENGFYYDFARNEPFTPEDF 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IE KM+EIIAR++ F ++    E+A   FE+K E YK E++  +P    +++YRQGEW
Sbjct: 118 PKIEAKMREIIARNAAFQREVWPREQAIAFFEAKGERYKAELIRDLPVDVPISIYRQGEW 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPH+RSTG +   FKLMKVAGAYWRGD    MLSRIY TAW  Q+EL  YL+ LE
Sbjct: 178 LDLCRGPHMRSTGDIGSAFKLMKVAGAYWRGDHRNAMLSRIYATAWRDQKELDAYLHQLE 237

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E+RDHRK+ +EM LFH+ E+  G IFWH KGW+++ TL  YMRR+ +   Y+E+ TPQ
Sbjct: 238 EAERRDHRKIGKEMGLFHLQEEAVGSIFWHPKGWRLYTTLQDYMRRRQEAGGYQEVRTPQ 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D+ LW+ SGHWD YR NMF     D++ KD R  ALKPMNCP HV +FNHGL+SYREL
Sbjct: 298 LVDRKLWEASGHWDKYRENMFIATVDDESEKD-RVLALKPMNCPCHVQIFNHGLRSYREL 356

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG+ +R EPSG+LHG+MRVR F QDDAH+FC ++Q+  E ++   L+ ++Y+D 
Sbjct: 357 PLRMAEFGACHRYEPSGALHGIMRVRSFVQDDAHIFCAEDQIAAETVEFVALLSAVYRDL 416

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF    VK S RPEKR GSD  WD +E  +K             +   +  GEGAFYGPK
Sbjct: 417 GFTDFRVKFSDRPEKRAGSDETWDRSEGALKEACRIAG------VEYELNPGEGAFYGPK 470

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E++L+DAIGRDWQCGT+QVDF LP R +A YV     +  PVM+HRA+ GS ERF+GI+
Sbjct: 471 LEFVLRDAIGRDWQCGTLQVDFVLPERLDAEYVGEDGNRHRPVMLHRAILGSFERFLGIL 530

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE   G  PLWL+P+Q  V TI   A  +A+E A   +   LS+E D RNE IN K+ +H
Sbjct: 531 IEEHAGRFPLWLAPVQVAVATIVDEAAPFAREAAAAFRKAGLSVELDLRNEKINRKVVDH 590

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
             +++P++ + G +EA +  + +RR       ++SL +A+  L  E+ PPD +
Sbjct: 591 IEQRVPVLAVIGRREAEQGKVVLRRLPGREQVEMSLAEAVATLAAEATPPDLK 643


>gi|77458158|ref|YP_347663.1| threonyl-tRNA synthetase [Pseudomonas fluorescens Pf0-1]
 gi|123758422|sp|Q3KEY2|SYT_PSEPF RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|77382161|gb|ABA73674.1| putative threonyl-tRNA synthetase [Pseudomonas fluorescens Pf0-1]
          Length = 640

 Score =  673 bits (1735), Expect = 0.0,   Method: Composition-based stats.
 Identities = 290/645 (44%), Positives = 423/645 (65%), Gaps = 18/645 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP    +T PDGS ++F    + ++VA SI   LAK  VA  +NGK+ D  D +  + ++
Sbjct: 1   MP---TITLPDGSQRSFDHPVSVAEVAASIGAGLAKATVAGKVNGKLVDACDIIDSDATL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           +IITP+D   L +IRHSCAH++  AV+ ++P  ++ IGP+I++GFYYD   E+PF+ D++
Sbjct: 58  QIITPKDEEGLEIIRHSCAHLVGHAVKQLYPTAKMVIGPVIDEGFYYDIAFERPFTPDDM 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A IE++M ++I  +   +K+     +  E+F+++ E YK+ ++E +P ++ + LY   E+
Sbjct: 118 AAIEQRMHQLIDTEYDVIKKVTPRAEVIEVFKARGEDYKLRLVEDMPNEQAMGLYYHEEY 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            D+CRGPHV +T  +K F KL K++GAYWRGD+    L R+YGTAW  +++L  Y+  +E
Sbjct: 178 VDMCRGPHVPNTRFLKSF-KLTKLSGAYWRGDAKNEQLQRVYGTAWADKKQLAAYIQRIE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+EKRDHRK+ + + LFH  E+  G++FWH  GW ++Q L  YMR+ +  + Y EI TPQ
Sbjct: 237 EAEKRDHRKIGKRLGLFHTQEEAPGMVFWHPNGWTLYQVLEQYMRKVQRDNGYLEIKTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHW +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYREL
Sbjct: 297 VVDRSLWEKSGHWANYADNMFT------TESESRDYAIKPMNCPCHVQVFNQGLKSYREL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFG+ +RNEPSG+LHG+MRVR FTQDDAH+FCT+EQM  E      L + +Y+DF
Sbjct: 351 PMRLAEFGACHRNEPSGALHGIMRVRAFTQDDAHIFCTEEQMQAESAAFIKLTMDVYRDF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF  + +KLSTRPEKRVGSD LWD      +             +   +  GEGAFYGPK
Sbjct: 411 GFTDVEMKLSTRPEKRVGSDELWD------RAEAALAAALDSAGLPYDLQPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD +GR WQCGT+Q+DFNLP R  A YV+  + + HPVM+HRA+ GS ERF+GI+
Sbjct: 465 IEFSLKDCLGRVWQCGTLQLDFNLPVRLGAEYVSEDNSRKHPVMLHRAILGSFERFVGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+++G  P WL+P QA++  IT    ++  ++   L       ++D RNE I +KIREH
Sbjct: 525 IEHYEGAFPAWLAPTQAVIMNITDKQADFVVQVEKTLNESGFRAKSDLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           ++ K+P +++ GDKE   +++ +R         + +      L +
Sbjct: 585 TLLKVPYLLVIGDKEVEMQTVAVRTREGADLGSMPVAQFAEFLAQ 629


>gi|228997455|ref|ZP_04157073.1| Threonyl-tRNA synthetase [Bacillus mycoides Rock3-17]
 gi|229005099|ref|ZP_04162823.1| Threonyl-tRNA synthetase [Bacillus mycoides Rock1-4]
 gi|228756201|gb|EEM05522.1| Threonyl-tRNA synthetase [Bacillus mycoides Rock1-4]
 gi|228762288|gb|EEM11216.1| Threonyl-tRNA synthetase [Bacillus mycoides Rock3-17]
          Length = 641

 Score =  673 bits (1735), Expect = 0.0,   Method: Composition-based stats.
 Identities = 285/644 (44%), Positives = 428/644 (66%), Gaps = 17/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            I + FPDGS K++    T  ++A SIS SL KKAVA  +NG++ DL   +  +  I+II
Sbjct: 5   MINIIFPDGSAKDYVKGITLEEIAASISSSLKKKAVAGKVNGQLFDLRRNIEQDAEIQII 64

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +    + V RH+ AHI+A+AV+ I+ +V++ +GP+IE+GFYYD D       ++L ++
Sbjct: 65  TMDSEEGIEVARHTSAHILAQAVKRIYGDVKLGVGPVIENGFYYDMDLPSSIGIEDLPKL 124

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M+ I+  +    +  ++ ++A +LF+   +  K+E+LE+IP  E VT+Y+QGE+ DL
Sbjct: 125 EKEMKNIVNENLKIERVEITRKEAEKLFQDVNDHLKLELLEAIPENEIVTIYKQGEFVDL 184

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ STG +K F     V+GAYWRGDSN  +L RIYG A+++Q+EL  YL+F+EE+ 
Sbjct: 185 CRGPHLPSTGYLKAFQLTH-VSGAYWRGDSNNQVLQRIYGVAFSSQKELESYLHFVEEAA 243

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KR+HRKL  E++LF  +E+  G+ F+  KG  +   L S++R  +   DY+E+ TP +++
Sbjct: 244 KRNHRKLGNELELFMFSEEAPGMPFYLPKGQIVRNELESFLREIQQNYDYQEVRTPIMMN 303

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           Q LW++SGHWD Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYR+LP+R
Sbjct: 304 QGLWEESGHWDHYKDNMYFSEV------DNKSFALKPMNCPGHMLIFKNKLHSYRDLPIR 357

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           + EFG V+R+E SG+L+GL+RVR F QDDAH+F T EQ+ +E   +   I  +Y+ FGFE
Sbjct: 358 MCEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPEQIESEIKSVLKQIDYVYRTFGFE 417

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPE  +G D LW+ AE  ++ VL ++        N  V  G+GAFYGPK ++
Sbjct: 418 Y-EVELSTRPEDSMGDDELWNQAELSLENVLKSLNY------NYRVNEGDGAFYGPKIDF 470

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+ R  QCGT+Q+DF +P +F+  Y++  +EK  PV+IHRAV GS +RF+GI+IE+
Sbjct: 471 HIKDALQRSHQCGTVQLDFQMPEKFDLNYIDERNEKRRPVVIHRAVLGSFDRFLGILIEH 530

Query: 542 FKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           F G  P WL+P+Q  V  +++    +Y +EI   LKS  L  E D R+E + YKIRE  +
Sbjct: 531 FGGAFPTWLAPVQIKVIPVSNQVHEQYTKEIEEKLKSVGLRAERDARSEKLGYKIREAQL 590

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +KIP I++ GDKE    S+ +R++G   ++ VSL   +  + KE
Sbjct: 591 QKIPYILVIGDKEMENGSVNVRKYGEEKSEVVSLSAFMESIRKE 634


>gi|312961943|ref|ZP_07776440.1| Threonyl-tRNA synthetase [Pseudomonas fluorescens WH6]
 gi|311283753|gb|EFQ62337.1| Threonyl-tRNA synthetase [Pseudomonas fluorescens WH6]
          Length = 640

 Score =  673 bits (1735), Expect = 0.0,   Method: Composition-based stats.
 Identities = 295/645 (45%), Positives = 429/645 (66%), Gaps = 18/645 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS ++F    + ++VA SI   LAK  VA  ++GK+ D SD +  + S+
Sbjct: 1   MP---TITLPDGSQRSFDHAVSVAEVAASIGAGLAKATVAGKVDGKLVDASDLITSDASL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           +IITP+D   L +IRHSCAH++  AV+ ++P  ++ IGP+I++GFYYD   E+PF+ D+L
Sbjct: 58  QIITPKDQEGLEIIRHSCAHLIGHAVKQLYPTAKMVIGPVIDEGFYYDIAYERPFTPDDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A IE++M  +I +D   +K+     +  ++F ++ E YK+ ++E +P ++ + LY   E+
Sbjct: 118 AAIEQRMHALIEKDYDVIKKVTPRAEVIDVFTARGEDYKLRLVEDMPDEQAMGLYYHEEY 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            D+CRGPHV +T  +K F KL K++GAYWRGD+    L RIYGTAW  +++L  Y+  +E
Sbjct: 178 VDMCRGPHVPNTRFLKSF-KLTKLSGAYWRGDAKNEQLQRIYGTAWADKKQLAAYIQRIE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+EKRDHRK+ + ++LFH+ E+  G++FWH  GW ++Q L  YMR+ + ++ Y EI TPQ
Sbjct: 237 EAEKRDHRKIGKRLNLFHLQEEAPGMVFWHPNGWTLYQVLEQYMRKVQRENGYLEIKTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHW +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYREL
Sbjct: 297 VVDRSLWEKSGHWANYADNMFT------TQSENRDYAIKPMNCPCHVQVFNQGLKSYREL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFG+ +RNEPSG+LHG+MRVRGFTQDDAH+FCT+EQM  E      L + +Y+DF
Sbjct: 351 PMRLAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEEQMQAESAAFIKLTMDVYRDF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF ++ +KLSTRPEKRVGSD LWD      +             +   +  GEGAFYGPK
Sbjct: 411 GFTEVEMKLSTRPEKRVGSDELWD------RAEAALAAALDSAGLAYDLQPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD +GR WQCGT+Q+DFNLP R  A YV+  + + HPVM+HRA+ GS ERF+GI+
Sbjct: 465 IEFSLKDCLGRVWQCGTLQLDFNLPIRLGAEYVSEDNSRKHPVMLHRAILGSFERFVGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+++G  P WL+P QA++  IT    ++A E+   L       ++D RNE I +KIREH
Sbjct: 525 IEHYEGAFPAWLAPTQAVIMNITDKQADFAAEVEKTLNESGFRAKSDLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           ++ K+P +++ GD+E   +++ +R         + +      L +
Sbjct: 585 TLLKVPYLLVIGDREVEMQTVAVRTREGADLGSMPVAQFAEFLAQ 629


>gi|307634865|gb|ADI84351.2| threonyl-tRNA synthetase [Geobacter sulfurreducens KN400]
          Length = 645

 Score =  673 bits (1735), Expect = 0.0,   Method: Composition-based stats.
 Identities = 286/644 (44%), Positives = 418/644 (64%), Gaps = 18/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEII 62
           DI++T PDGS +     AT  D+A SI   LAK A+A  I+G   D++ P+ +G+ +EII
Sbjct: 12  DIRVTLPDGSERILAEGATVRDLAASIGAGLAKAAIAGKIDGVQVDVTAPLTDGARVEII 71

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +    L +IRHS +H+MA+AV+ ++P  +V IGP +E GFYYDFD E PFS ++LA+I
Sbjct: 72  TDKSADGLDIIRHSTSHLMAQAVKQLFPTAKVTIGPAVETGFYYDFDVETPFSPEDLARI 131

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E++M+E+   D P  +Q LS ++A +LF    E YKVEI+E++P  E+V+LYRQG++ DL
Sbjct: 132 EERMRELAKADIPVERQVLSRDEAVKLFRDMGEEYKVEIIEALPE-ESVSLYRQGDFVDL 190

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ ST   + F KL  +AGAYWRGD    ML R+YGTA+  ++EL  YL  +EE++
Sbjct: 191 CRGPHLPSTSFCRAF-KLTSLAGAYWRGDEKNKMLQRVYGTAFADKKELDAYLEKIEEAK 249

Query: 243 KRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVL 300
           +RDHRKL RE+DLF  ++D   G + WH KG  +   L  + RR+ +K  Y+ +  PQ+L
Sbjct: 250 RRDHRKLGRELDLFSFSDDVGAGFVIWHPKGAMLRTLLEDFERREHLKRGYDIVVGPQIL 309

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
              LWQ+SGH+D+YR NM+  +       + + F +KPMNC  H+ ++   L+SYR+LP+
Sbjct: 310 KTELWQRSGHYDNYRENMYFTEV------EGQGFGIKPMNCLSHMMIYKSQLRSYRDLPL 363

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R  E G+V+R+E +G LHGL+RVR FTQDDAH+ CT EQ+  E   + + +  +   FGF
Sbjct: 364 RFFELGTVHRHERAGVLHGLLRVRCFTQDDAHILCTPEQLDAEIKGVISFVNDVMGIFGF 423

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           +  M +LSTRPEK +GSD  W+ A   + G L              +  G+GAFYGPK +
Sbjct: 424 DYEM-ELSTRPEKSIGSDEDWERATGALLGALKDSGRP------YEINEGDGAFYGPKID 476

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
             L+D++ R WQC TIQ DF LP RF+  YV++  E+  PVM+HR + GSIERFIG++IE
Sbjct: 477 IKLRDSLDRKWQCATIQCDFTLPERFDLTYVDADGERKRPVMVHRVILGSIERFIGVLIE 536

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +F GN PLWLSP+QAIV T+T +   YA ++   L+++ + ++ DFRNE + +KIRE  +
Sbjct: 537 HFAGNFPLWLSPVQAIVLTVTDNQQPYAAQVFETLRTNGVRVQKDFRNEKLGFKIREAQL 596

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +KIP +++ GDKE    ++  R    +    +   + +  +  E
Sbjct: 597 QKIPYMLVIGDKEVESGTVTPRFRDGSNLAAMKPEEFVAFVNDE 640


>gi|238791701|ref|ZP_04635338.1| Threonyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
 gi|238728805|gb|EEQ20322.1| Threonyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
          Length = 642

 Score =  673 bits (1735), Expect = 0.0,   Method: Composition-based stats.
 Identities = 292/647 (45%), Positives = 430/647 (66%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS ++F    +  DVA  I   LAK  +A  +NG++ D SD +  +  +
Sbjct: 1   MPV---ITLPDGSQRHFDHAVSALDVALDIGPGLAKACIAGRVNGELVDASDLIESDAQL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L ++RHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D ++  + ++L
Sbjct: 58  AIITTKDAEGLEILRHSCAHLLGHAIKQLWPDTKMAIGPVIDNGFYYDVDIDRTLTQEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M E+  +D   +K+ +S ++AR+ F ++ E YKV IL E+I   +   LY   E
Sbjct: 118 DLLEKRMHELADKDYDVIKKKVSWQEARDTFAARGEDYKVAILDENISHDDRPGLYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KL K +GAYWRGDS   ML RIYGTAW  +++L  YL  L
Sbjct: 178 YVDMCRGPHVPNMRFCHHF-KLQKTSGAYWRGDSKNKMLQRIYGTAWGDKKQLNAYLQRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF+ L +++R K+K+  Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKEYQYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW+++GHW++Y  +MF       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 297 FMMDRVLWEKTGHWENYAEHMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  
Sbjct: 351 LPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQVRDEVNSCIKMVYDMYST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI+VKLSTRPEKR+GSD LW  AE+ +   L      +++ I      GEGAFYGP
Sbjct: 411 FGFEKIVVKLSTRPEKRIGSDDLWTRAEDDLAAAL------TENDIPFEYQPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF+LP R +A Y+  ++++  PVMIHRA+ GS+ERFIGI
Sbjct: 465 KIEFTLHDCLDRAWQCGTVQLDFSLPGRLSASYIGENNDRQVPVMIHRAILGSMERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E + G  P WL+P+Q +V  IT S  +Y Q++   L+   +  + D RNE I +KIRE
Sbjct: 525 LTEEYAGFFPTWLAPVQVVVMNITDSQSDYVQQVTKKLQDAGIRAKADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H+++++P +++CGDKE     I +R         + +   +  L  E
Sbjct: 585 HTLRRVPYMLVCGDKEVESGKIAVRTRRGKDLGSLDVNVVVDQLLTE 631


>gi|262276749|ref|ZP_06054542.1| threonyl-tRNA synthetase [alpha proteobacterium HIMB114]
 gi|262223852|gb|EEY74311.1| threonyl-tRNA synthetase [alpha proteobacterium HIMB114]
          Length = 637

 Score =  673 bits (1735), Expect = 0.0,   Method: Composition-based stats.
 Identities = 338/649 (52%), Positives = 458/649 (70%), Gaps = 14/649 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +T PDG+IK +    TG+ +A+ I+ SL KKA+ V ++G+  DL   + ++  ++II
Sbjct: 1   MVSITLPDGNIKEYTAAVTGAQIAKDIAPSLLKKALVVEVDGEFKDLGVEISKDSKVKII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D  +L +IRH  AH MA AVQ ++P  QV IGP+IE+GFYYDF +++PFS  +L +I
Sbjct: 61  TMDDDYALELIRHDSAHCMAMAVQELFPGTQVTIGPVIENGFYYDFARDEPFSDSDLEKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EKKM EII +D    ++    +KA + F+   E YK EI+ESIP  E +++Y  G+W DL
Sbjct: 121 EKKMNEIIDKDPKTTREVWDRDKAIQHFKKIGENYKAEIIESIPKGEELSIYFHGDWHDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ S G++ K FKLMKVAGAYWRGDSN  ML RIYGT W T+++L +YL+ +EE+E
Sbjct: 181 CRGPHLPSLGRIGKAFKLMKVAGAYWRGDSNNKMLQRIYGTCWKTKKDLDEYLHRIEEAE 240

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLD 301
           KRDHRKL + +DLFH  E+  G +FWH+KGW +FQ+L+ +MR ++    Y E+NTP++LD
Sbjct: 241 KRDHRKLGKALDLFHFQEESPGAVFWHQKGWSLFQSLVKFMRDKQTDAGYLEVNTPEMLD 300

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW++SGHW+ ++ +M+       T  D +TFA+KPMNCPGH+ VFN GLKSY++LP++
Sbjct: 301 KTLWEKSGHWEKFQEHMYT------TDADEKTFAIKPMNCPGHIQVFNQGLKSYKDLPLK 354

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           ++EFG V+R EPSG+LHGLMRVR FTQDDAH+FCT+EQ+  E LK+ NLI+ IYK FGF+
Sbjct: 355 ISEFGKVHRYEPSGALHGLMRVRAFTQDDAHIFCTEEQITEESLKVTNLILDIYKSFGFK 414

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + +K S RPEKRVG D +W+ +E  +   LD IK S    +   +  GEGAFYGPK E+
Sbjct: 415 NVKLKFSDRPEKRVGDDKIWNKSEKAL---LDAIKTS---GLKYEINKGEGAFYGPKIEF 468

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
           +L DAIGRDWQCGT+QVDFNLP R  A YV +   K  PVM+HRA+FGS+ERFIGI+IE+
Sbjct: 469 VLIDAIGRDWQCGTLQVDFNLPGRLGASYVANDGSKKIPVMLHRAMFGSLERFIGILIEH 528

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G  P WLSP Q  V  I++   +YA ++  LL+   L    D RNE INYKIREHS+ 
Sbjct: 529 HTGKFPFWLSPEQVAVLPISNKQNDYASKVKLLLEKKGLRSIIDDRNEKINYKIREHSVS 588

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDC 650
           KIP+++ICG KE    +I IRR G T  Q VSL +A+  L+ ES  P  
Sbjct: 589 KIPVLMICGAKEVQNNTITIRRLGQTNQQTVSLEEAVTNLSLESNTPSI 637


>gi|296449369|ref|ZP_06891150.1| threonine--tRNA ligase [Clostridium difficile NAP08]
 gi|296880697|ref|ZP_06904650.1| threonine--tRNA ligase [Clostridium difficile NAP07]
 gi|296261715|gb|EFH08529.1| threonine--tRNA ligase [Clostridium difficile NAP08]
 gi|296428315|gb|EFH14209.1| threonine--tRNA ligase [Clostridium difficile NAP07]
          Length = 670

 Score =  672 bits (1734), Expect = 0.0,   Method: Composition-based stats.
 Identities = 278/644 (43%), Positives = 405/644 (62%), Gaps = 16/644 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
           + IK+   DGSIK F    +  DVA+SIS  LA+  VA ++NG+V  L   +  +  + +
Sbjct: 31  TMIKVALKDGSIKEFENAISVMDVAKSISEGLARNVVAASVNGEVVGLDHIIDTDCDLNL 90

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
              ED     V RH+ AHI+A+A++ ++PE ++AIGP IE+GFYYD D +     ++L +
Sbjct: 91  FKFEDKEGKEVFRHTSAHILAQAIKRLYPEAKLAIGPSIENGFYYDIDLDHRLVPEDLEK 150

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE +M++I   D    +  L   +A EL + + E YKVE++  +P  E ++ Y+QG++ D
Sbjct: 151 IEAEMKKIAKEDLKIERFELPRNEALELMKEQGEDYKVELISDLPESEIISFYKQGDFTD 210

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ ST +VK   KL  VAGAYWRGD N  ML RIYGT++   ++L +YL+ LEE+
Sbjct: 211 LCRGPHLPSTKKVK-AVKLQSVAGAYWRGDENNKMLQRIYGTSFEKNKDLEEYLHLLEEA 269

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           +KRDHRKL +E+ LF I E+G G   +  KG ++   L+ + R    K  Y EI +P +L
Sbjct: 270 KKRDHRKLGKELGLFMIPEEGPGFPMFLPKGMELKNELLKFWREIHRKAGYIEIESPIIL 329

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ LW+ SGHW  Y+ NM+ VK       D   +A+KPMNCPG +  +N  L SYR+ P+
Sbjct: 330 NRKLWETSGHWYHYKENMYTVKI------DDEDYAIKPMNCPGGLIYYNSQLHSYRDFPM 383

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G V+R+E SG+L GLMRVR FTQDD+H+F   EQ+ +E   + NLI  IYK FGF
Sbjct: 384 RVAELGRVHRHELSGALQGLMRVRAFTQDDSHIFMLPEQIKDEIKGVANLIDGIYKTFGF 443

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           E  + +LSTRPE  +GS+  W+ AEN ++  L+ +       +   +  G+GAFYGPK +
Sbjct: 444 EYNL-ELSTRPENSMGSNEEWEAAENGLREALEELG------LPYTINEGDGAFYGPKID 496

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           + LKD +GR WQCGTIQ+D  LP +F+  Y+    EK  PVMIHR  FGSIERFIGI+IE
Sbjct: 497 FHLKDCLGRTWQCGTIQLDMQLPRQFDNTYIGQDGEKHRPVMIHRVAFGSIERFIGILIE 556

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           ++ G  P+WLSP Q  +  I+   ++YA E+   L    + +E D R E I +KIRE  +
Sbjct: 557 HYAGKFPVWLSPTQVKILPISDKFMDYANEVKKELFDKGIRVELDDRAEKIGFKIREAQL 616

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +K+P ++I G+KE ++ ++ +R         + L + I  ++KE
Sbjct: 617 EKVPYMLIVGEKEVADNNVSVRSRDKGEIGSIKLDEFIASISKE 660


>gi|77360339|ref|YP_339914.1| threonyl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
 gi|76875250|emb|CAI86471.1| threonyl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
          Length = 636

 Score =  672 bits (1734), Expect = 0.0,   Method: Composition-based stats.
 Identities = 302/647 (46%), Positives = 428/647 (66%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
           MP    +T PDGS ++F    +  DVA  I   LAK  +A  +NG+  D  D + E S +
Sbjct: 1   MPV---ITLPDGSQRSFENPVSTLDVANDIGPGLAKATIAGRVNGERVDACDLISEDSRL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT +D   L +IRHSCAH++  AV+ ++P+ ++AIGP I++GFYYD D EQ  S D+L
Sbjct: 58  EIITAKDDDGLEIIRHSCAHLIGHAVKQLFPDAKMAIGPTIDNGFYYDIDMEQSLSQDDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             IEK+M ++   +   +K+ +S ++AR++F ++ E YK+EIL E+I   +   LY   E
Sbjct: 118 DAIEKRMLQLAKTNYDVVKKTVSWQEARDVFAARGETYKIEILDENIAKDDRPGLYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +    + F K+MKVAGAYWRGDS   ML RIYGTAW  +++L  YL  L
Sbjct: 178 YVDMCRGPHVPNMKFCQNF-KIMKVAGAYWRGDSENKMLQRIYGTAWGDKKQLKAYLKRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+EKRDHR++ + +DL+H  E+  G++FWH  GW I++ L  ++R K+++ DYEE+  P
Sbjct: 237 EEAEKRDHRRIGKALDLWHWQEEAPGMVFWHNDGWSIYRELEDFVREKLREYDYEEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW++SGHW+ Y   MF       T+ + R +A+KPMNCPGHV +FN GLKSYR+
Sbjct: 297 MMMDRSLWEKSGHWEKYADAMFT------TVSEKREYAIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFG  +RNEPSG+LHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++   Y+ 
Sbjct: 351 LPLRMAEFGCCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQIMDEVSACIKMVYDTYET 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI+VKLSTRPE+R+G D +WD AE  +   L        + I    L GEGAFYGP
Sbjct: 411 FGFEKIVVKLSTRPEQRIGEDHMWDKAELALAEALKL------NEIEFDYLPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF LP R  A YV  ++E+  PVMIHRA+ GSIERFIGI
Sbjct: 465 KIEFTLYDCLDRAWQCGTVQLDFALPGRLGATYVAENNERRTPVMIHRAILGSIERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E + G  P WL+P Q ++  IT    +Y +E+   L    +    D RNE I +KIRE
Sbjct: 525 LTEEYAGLFPTWLAPKQVVIMNITDKQADYVKEVVQKLNKLGIRATADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H++K+IP +++ GDKE  ++ + +R        K ++ D +  +++E
Sbjct: 585 HTLKRIPYLLVVGDKEVEQQEVAVRTRTGEDLGKFNVDDFVAKISEE 631


>gi|84687895|ref|ZP_01015762.1| threonyl-tRNA synthetase [Maritimibacter alkaliphilus HTCC2654]
 gi|84664089|gb|EAQ10586.1| threonyl-tRNA synthetase [Rhodobacterales bacterium HTCC2654]
          Length = 649

 Score =  672 bits (1734), Expect = 0.0,   Method: Composition-based stats.
 Identities = 328/653 (50%), Positives = 442/653 (67%), Gaps = 11/653 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEI 61
           S I LTFPDG+ + +    T + +A  IS SLAKKA++  +NG   DL  P+ E S I I
Sbjct: 2   SHISLTFPDGNTRVYDAGITPAAIAADISNSLAKKAISATVNGAHYDLQWPITEDSEIAI 61

Query: 62  ITPEDP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            T +D  ++L +IRH  AHIMA AVQ++WP+ +V IGP+IE G+YYDFD+++PF+ ++L 
Sbjct: 62  HTMKDDAQALELIRHDAAHIMARAVQALWPDTKVTIGPVIEHGWYYDFDRDEPFTPEDLG 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-ENVTLYRQGEW 179
            IE KM+EII        +  S   A   +E   E YKVE++ +IP   + + +Y  G+W
Sbjct: 122 AIEAKMKEIINARDEVRTEVWSRADAIAHYEKTGEPYKVELVNAIPDDGQPIRMYWHGDW 181

Query: 180 FDLCRGPHVRSTGQ-VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
            DLCRGPH+++TGQ     FKLMKVAGAYWRGDS RPML RIYG A+  + +L ++L FL
Sbjct: 182 QDLCRGPHLQNTGQVPADAFKLMKVAGAYWRGDSTRPMLQRIYGVAFKNRDDLKKHLTFL 241

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTP 297
           EE+EKRDHR+L REMDLFH+ E+  G +FWH  GW I+  L  YMRR+ +   Y E+NTP
Sbjct: 242 EEAEKRDHRRLGREMDLFHMQEEAPGQVFWHPNGWTIYTVLQDYMRRQQQRGGYVEVNTP 301

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           QV+D+ LW+ SGHW+ Y+ NMF V+  ++  ++    ALKPMNCP HV +FN GLKSYR+
Sbjct: 302 QVVDRKLWEASGHWEKYQENMFIVEVDEEHAREKAVNALKPMNCPCHVQIFNVGLKSYRD 361

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS  R EPSG+LHG+MRVRGFTQDDAH+FCT++Q+ +E  +  + +  IYKD
Sbjct: 362 LPLRMAEFGSCNRYEPSGALHGIMRVRGFTQDDAHIFCTEDQIESETERFISFLAGIYKD 421

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
            GF    +K S RP+ R GSD +WD AE  +   LD     + D     +  GEGAFYGP
Sbjct: 422 LGFPTYKIKFSDRPDTRAGSDEIWDKAEKAL---LDATHKVTND---VELNPGEGAFYGP 475

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E++L DAIGRDWQCGT+QVDF LP R +A Y+     K  PVM+HRA  GS ERFIGI
Sbjct: 476 KLEFVLTDAIGRDWQCGTLQVDFVLPERLDANYIGEDGAKHRPVMLHRATLGSFERFIGI 535

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE   G LP W++P Q +V +I S A +Y +E+ + L++  +  E D RNE INYK+RE
Sbjct: 536 LIEEHAGKLPFWIAPRQVVVASIVSDADDYVREVVDALRAKGVRAEADTRNEKINYKVRE 595

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDC 650
           HS  K+P+I+  G KE  +R++ +RR G   T+ V+L + +  L+ E+ PPD 
Sbjct: 596 HSAGKVPVILAIGMKEVEDRTVTLRRLGEKQTRVVALDEVVQELSTEATPPDL 648


>gi|30262390|ref|NP_844767.1| threonyl-tRNA synthetase [Bacillus anthracis str. Ames]
 gi|47527681|ref|YP_019030.1| threonyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49185231|ref|YP_028483.1| threonyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|165870612|ref|ZP_02215266.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167633022|ref|ZP_02391348.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|167639601|ref|ZP_02397871.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|170686938|ref|ZP_02878157.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|170706731|ref|ZP_02897190.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|177649587|ref|ZP_02932589.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190565155|ref|ZP_03018075.1| threonyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|227814802|ref|YP_002814811.1| threonyl-tRNA synthetase [Bacillus anthracis str. CDC 684]
 gi|229603163|ref|YP_002866723.1| threonine--tRNA ligase [Bacillus anthracis str. A0248]
 gi|254684964|ref|ZP_05148824.1| threonyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066]
 gi|254722370|ref|ZP_05184158.1| threonyl-tRNA synthetase [Bacillus anthracis str. A1055]
 gi|254737411|ref|ZP_05195115.1| threonyl-tRNA synthetase [Bacillus anthracis str. Western North
           America USA6153]
 gi|254743403|ref|ZP_05201088.1| threonyl-tRNA synthetase [Bacillus anthracis str. Kruger B]
 gi|254751726|ref|ZP_05203763.1| threonyl-tRNA synthetase [Bacillus anthracis str. Vollum]
 gi|254760245|ref|ZP_05212269.1| threonyl-tRNA synthetase [Bacillus anthracis str. Australia 94]
 gi|30257021|gb|AAP26253.1| threonine--tRNA ligase [Bacillus anthracis str. Ames]
 gi|47502829|gb|AAT31505.1| threonyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49179158|gb|AAT54534.1| threonyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|164713767|gb|EDR19290.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167512310|gb|EDR87686.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|167531834|gb|EDR94499.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|170128462|gb|EDS97330.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|170668989|gb|EDT19733.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|172084661|gb|EDT69719.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190563182|gb|EDV17147.1| threonyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|227004862|gb|ACP14605.1| threonine--tRNA ligase [Bacillus anthracis str. CDC 684]
 gi|229267571|gb|ACQ49208.1| threonine--tRNA ligase [Bacillus anthracis str. A0248]
          Length = 639

 Score =  672 bits (1734), Expect = 0.0,   Method: Composition-based stats.
 Identities = 278/644 (43%), Positives = 432/644 (67%), Gaps = 17/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEII 62
            I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N ++ DL   + E   +EII
Sbjct: 5   MIEIKFPDGSVKEFVKGITLEEIAGSISSSLKKKAVAGNVNDELYDLRRNIEENAEVEII 64

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +    + + RHS AHI+A+AV+ ++ ++ + +GP+IE+GFYYD D     + ++L +I
Sbjct: 65  TIDSNEGVEIARHSAAHILAQAVKRLYGDINLGVGPVIENGFYYDMDLPSSVNVEDLRKI 124

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M++II  +    +  +S E+A +LF+   +  K+E+LE+IP+ E+VTLY+QGE+ DL
Sbjct: 125 EKEMKKIINENIKVERVEVSREEAAKLFQEMNDRLKLELLEAIPSGESVTLYKQGEFVDL 184

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ STG +K F     V+GAYWRGDSN  +L RIYG A+++Q+EL +YL+F+EE+ 
Sbjct: 185 CRGPHLPSTGYLKVFQLTH-VSGAYWRGDSNNQVLQRIYGVAFSSQKELEEYLHFVEEAA 243

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KR+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R  + + +Y+E+ TP +++
Sbjct: 244 KRNHRKLGNELELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMN 303

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           Q +W++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R
Sbjct: 304 QEVWERSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIR 357

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           + EFG V+R+E SG+L+GL+RVR F QDDAH+F T EQ+ +E   +   I  +YK FGFE
Sbjct: 358 MCEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPEQIEDEIKSVMAQIDYVYKTFGFE 417

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPE  +G D LW+ AE  ++ VL ++           +  G+GAFYGPK ++
Sbjct: 418 Y-EVELSTRPEDSMGDDELWEQAEASLENVLQSLNY------KYRLNEGDGAFYGPKIDF 470

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+ R  QCGTIQ+DF +P +F+  Y++  +EK  PV+IHRAV GS++RF+ I+IE+
Sbjct: 471 HIKDALNRSHQCGTIQLDFQMPEKFDLNYIDEKNEKRRPVVIHRAVLGSLDRFLAILIEH 530

Query: 542 FKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           F G  P W++P+Q  V  ++++  V+YA E+A+ L    + +E D R+E + YKIRE  +
Sbjct: 531 FGGAFPAWVAPVQVKVIPVSNAVHVQYADEVADKLAQAGVRVERDMRDEKLGYKIREAQM 590

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +K+P +++ GDKE    ++ +R++G   +  + L   +  + +E
Sbjct: 591 QKVPYVLVIGDKEMENGAVNVRKYGEEKSGVIELDMFVESMKEE 634


>gi|326795752|ref|YP_004313572.1| threonyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
 gi|326546516|gb|ADZ91736.1| threonyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
          Length = 638

 Score =  672 bits (1734), Expect = 0.0,   Method: Composition-based stats.
 Identities = 300/647 (46%), Positives = 431/647 (66%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP    +T PDGS + F    T   VAE I   LAK  VA  ING + D  + +  + ++
Sbjct: 1   MPV---ITLPDGSQRTFSEPVTLMQVAEDIGPGLAKATVAGKINGVLVDACEVISEDSNV 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            ++T  D   L +IRHS AH++  AV+ ++P  ++AIGP+I +GFYYD   E+PF+ D++
Sbjct: 58  SLVTGRDEEGLEIIRHSFAHLVGHAVKQLYPTAKMAIGPVINEGFYYDIAFERPFTLDDM 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-ENVTLYRQGE 178
           A IEK++ E+I +D   +K     ++AR  F+ + E+YKV++++ +      V LYR  E
Sbjct: 118 AAIEKRIAELIKKDYDVVKTMTPIDEARRQFDERGESYKVQLIDDMDESVTEVGLYRHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +T  ++ F KLMK+AGAYWRGDSN  ML R+YGTAW+ ++EL  YL  +
Sbjct: 178 YMDMCRGPHVPNTRVLRYF-KLMKLAGAYWRGDSNNEMLQRVYGTAWSDKKELKAYLLRI 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTP 297
           EE+EKRDHRKL +++DLFH+ E+  G++FWH KGW+++Q +  YMR +++ ++Y+E+ TP
Sbjct: 237 EEAEKRDHRKLGKKLDLFHVQEEAPGMVFWHPKGWRLYQAVEQYMRQKQLDNNYQEVKTP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           Q++D+ LW++SGHW  Y+ NMF       T  + R +A+KPMNCP H+ V+N GLKSYR+
Sbjct: 297 QIVDRVLWEKSGHWGKYQENMFT------THSENRDYAVKPMNCPCHIQVYNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP R+AEFGS +RNEPSG+LHG+MRVR F QDD H+F T+ Q+ +E  +   L+  +Y D
Sbjct: 351 LPFRMAEFGSCHRNEPSGALHGIMRVRNFVQDDGHIFVTENQIQSEVSEFIKLLHEVYAD 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF+ I+ +LSTRPE+RVGSD +WD AE  +   LD         +    L GEGAFYGP
Sbjct: 411 FGFDNIIYRLSTRPEQRVGSDEVWDKAEKALADALDVAG------LEWEELPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ LKDAIGR WQCGTIQVDF++P+R  A YV+    +  PVM+HRA+ GS+ERFIGI
Sbjct: 465 KIEFSLKDAIGRVWQCGTIQVDFSMPTRLGAQYVSEDGSRQTPVMLHRAIVGSLERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE  +G+ PLWL+P Q ++  IT    EY + +   L S+    + D RNE I +KIRE
Sbjct: 525 LIEETEGSFPLWLAPEQVVIMNITDRQTEYCENLEKTLNSNGFRAKLDLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H++++IP +I+ GDKE     + +R         +S+ +   +L  E
Sbjct: 585 HTLQRIPYLIVVGDKEVENGKVAVRTRSGEDLGVMSVNEFEDLLRDE 631


>gi|33592589|ref|NP_880233.1| threonyl-tRNA synthetase [Bordetella pertussis Tohama I]
 gi|33596580|ref|NP_884223.1| threonyl-tRNA synthetase [Bordetella parapertussis 12822]
 gi|33601133|ref|NP_888693.1| threonyl-tRNA synthetase [Bordetella bronchiseptica RB50]
 gi|81425212|sp|Q7VY64|SYT_BORPE RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|81427196|sp|Q7W912|SYT_BORPA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|81431262|sp|Q7WKF7|SYT_BORBR RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|33572235|emb|CAE41786.1| threonyl-tRNA synthetase [Bordetella pertussis Tohama I]
 gi|33573281|emb|CAE37262.1| threonyl-tRNA synthetase [Bordetella parapertussis]
 gi|33575568|emb|CAE32646.1| threonyl-tRNA synthetase [Bordetella bronchiseptica RB50]
 gi|332382006|gb|AEE66853.1| threonyl-tRNA synthetase [Bordetella pertussis CS]
          Length = 649

 Score =  672 bits (1734), Expect = 0.0,   Method: Composition-based stats.
 Identities = 316/648 (48%), Positives = 443/648 (68%), Gaps = 20/648 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAI--NG---KVCDLSDPV-REG 57
            +++T PDGS + +P   T ++VA+SI   LAK A+A  +  +G   ++ D S  +  + 
Sbjct: 1   MVQITLPDGSQRQYPGPVTVAEVAQSIGAGLAKAALAGRVAFDGAEPRLVDTSFRIDNDA 60

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSD 117
            + I+T +D   L +IRHS AH++A AV+S++P+ QV IGP+I++GFYYDF  ++PF+ +
Sbjct: 61  QLAIVTAKDADGLDLIRHSTAHLLAYAVKSLFPDAQVTIGPVIDNGFYYDFSYKRPFTPE 120

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +L  IEKKM E+  +D    ++  S ++A   F+   E YK EI+ SIP+ E ++LYR+G
Sbjct: 121 DLQAIEKKMAELARKDEVVTREEWSRDEAVAYFKGIGEVYKAEIIASIPSNETLSLYREG 180

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           ++ DLCRGPHV STG++K F KLMKVAGAYWRGDS   ML RIYGTAW ++ +   YL+ 
Sbjct: 181 DFIDLCRGPHVPSTGKLKVF-KLMKVAGAYWRGDSKNEMLQRIYGTAWASKDDQDAYLHM 239

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINT 296
           LEE+E+RDHRK+ RE+DLFH  ++  G+IFWH KGW ++Q +  YMR+  + + Y+E+  
Sbjct: 240 LEEAERRDHRKIGRELDLFHFQDEAPGLIFWHPKGWALWQQVEQYMRKVYQDNGYQEVKA 299

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           PQ+LD  LW+++GHWD+YR NMF       T  + R + LKPMNCPGHV +FN GL SYR
Sbjct: 300 PQILDLTLWKKTGHWDNYRENMFT------TESENRVYGLKPMNCPGHVQIFNAGLHSYR 353

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ELP+R  EFG  +RNEPSGSLHG+MRVRGFTQDD H+FCT++Q+ +EC     L+  +YK
Sbjct: 354 ELPLRYGEFGQCHRNEPSGSLHGMMRVRGFTQDDGHIFCTEDQLQDECAAFTALLQKVYK 413

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           DFGF +++ K++TRPEKR+GSD +WD AE  +   L              +  GEGAFYG
Sbjct: 414 DFGFTEVLYKVATRPEKRIGSDEIWDKAETALMESLRRTGC------EFEISPGEGAFYG 467

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK EY LKDAIGR WQCGTIQVDF++P R  A YV+ + ++  PVM+HRA+ GS+ERFIG
Sbjct: 468 PKVEYTLKDAIGRHWQCGTIQVDFSMPVRLGAEYVDQNDQRRPPVMLHRAILGSLERFIG 527

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           ++IEN  G +P WL+P+QA+V  I+  + EYA +I   LK     ++ D R E I  KIR
Sbjct: 528 MLIENHAGAMPPWLAPLQAVVCCISEHSAEYAAQITQSLKKQGFRVQADLRGEKITRKIR 587

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           EHS++KIP +++ GDKE    ++ +R  G      ++L D I  L ++
Sbjct: 588 EHSLQKIPYLLVVGDKEMQNGTVAVRGLGGLDLGVIALDDFIARLAED 635


>gi|153938058|ref|YP_001392415.1| threonyl-tRNA synthetase [Clostridium botulinum F str. Langeland]
 gi|166223335|sp|A7GI05|SYT_CLOBL RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|152933954|gb|ABS39452.1| threonine--tRNA ligase [Clostridium botulinum F str. Langeland]
 gi|295320405|gb|ADG00783.1| threonine--tRNA ligase [Clostridium botulinum F str. 230613]
          Length = 635

 Score =  672 bits (1734), Expect = 0.0,   Method: Composition-based stats.
 Identities = 296/643 (46%), Positives = 416/643 (64%), Gaps = 16/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+T  DG +         SD+A  IS +L KKA+A  I+G+  DL   + ++ S+EI+
Sbjct: 1   MIKITLKDGKVMEIEEGIKISDIAMKISPALYKKALAAKIDGETVDLMTELHKDSSLEIL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T ED      +RH+ AHI+A+AV+ ++PEV++AIGP I+ GFYYDF+ +  F+ + L +I
Sbjct: 61  TFEDEMGKWALRHTGAHILAQAVKRLYPEVKLAIGPAIDTGFYYDFEADFTFTPEMLEKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E ++++II  +    +  L  E+A  L + K E YKVE++E +P  E ++ Y+QG++ DL
Sbjct: 121 EAEIKKIIKENHKLERFELPREEAINLMKEKNEDYKVELIEDLPEGEVISFYKQGDFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPHV STG+VK   KL+ +AGAYWRGD    ML RIYGTA+  + EL +YL  +EE++
Sbjct: 181 CAGPHVPSTGKVKSV-KLLSLAGAYWRGDEKNKMLQRIYGTAFTKKSELDEYLNMIEEAK 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLD 301
           KRDHRKL +E+DLF I E+G G  F+H KG  +   L S+ R K  K  Y+EI TP +L+
Sbjct: 240 KRDHRKLGKELDLFSIHEEGPGFPFFHPKGMIVRNILESFWREKHTKAGYQEIRTPLILN 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW QSGHWD Y+ NM+       T  D   +A+KPMNCPG + V+   + SYR+LP+R
Sbjct: 300 EALWHQSGHWDHYKENMYF------TNIDDGDYAIKPMNCPGGILVYKSSMHSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           L+E G V+R+E SG+LHGLMRVR FTQDDAH++ TKEQ+  E + I  LI   YK FGFE
Sbjct: 354 LSELGIVHRHELSGALHGLMRVRCFTQDDAHLYMTKEQIKEEVIGIIKLIDEFYKLFGFE 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPE  +GSD  W+ A N ++  LD+I           V  G+GAFYGPK ++
Sbjct: 414 YF-VELSTRPEDSMGSDEDWEIATNGLREALDSIGK------EYRVNEGDGAFYGPKIDF 466

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            LKD IGR WQCGTIQ+DF +P RF+  Y+ +  EK  PVM+HR ++GS+ERFIGI+IE 
Sbjct: 467 HLKDCIGRTWQCGTIQLDFQMPERFDLSYIGADGEKHRPVMVHRTIYGSVERFIGILIEQ 526

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  P WL+P+Q  +  IT S  +Y +++   LK +++ +E D RNE I YKIRE  ++
Sbjct: 527 YAGAFPTWLAPVQVKLMNITDSQYDYLKKVEETLKENNIRVEIDTRNEKIGYKIREAQLQ 586

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K+P ++I GDKE     + +R         +SL + I  +  E
Sbjct: 587 KVPYMLILGDKEVEAGKVAVRSRKDGDLGAISLEEFIEKIKNE 629


>gi|226324523|ref|ZP_03800041.1| hypothetical protein COPCOM_02307 [Coprococcus comes ATCC 27758]
 gi|225206971|gb|EEG89325.1| hypothetical protein COPCOM_02307 [Coprococcus comes ATCC 27758]
          Length = 643

 Score =  672 bits (1734), Expect = 0.0,   Method: Composition-based stats.
 Identities = 285/650 (43%), Positives = 409/650 (62%), Gaps = 16/650 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K+T  DGS K +    +  D+A+ IS  LA+ A A  ++G+V DL   + ++  + I+T
Sbjct: 1   MKITLKDGSSKEYAQSMSVIDIAKDISEGLARVATAGEVDGEVVDLRTVIDKDCELNILT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
             D +     RH+ +HIMA+A++ ++P+ ++AIGP IEDGFYYD D+E P  +++L +IE
Sbjct: 61  FNDEKGKGAFRHTTSHIMAQAIKRLYPDTKLAIGPSIEDGFYYDIDRETPLVAEDLEKIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M++I+  D P  +  +   +A   F+ K E YKVE++E +P    ++ Y QGE+ DLC
Sbjct: 121 AEMKKIVKEDLPIKQYTMPRAEAIAYFKEKDEPYKVELIEDLPEDSVISFYSQGEFTDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+ ST  VK F KL  +AGAYWRG     ML R+YGT++  + EL +YL+ +EE++K
Sbjct: 181 AGPHLMSTKPVKAF-KLTSLAGAYWRGSEKNKMLQRVYGTSYPKKAELEEYLHMMEEAKK 239

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           RDHRKL +E+ LF + E+G G  F+  KG ++   L+ Y R    K  Y EI+TP +L +
Sbjct: 240 RDHRKLGKELGLFMMREEGPGFPFFLPKGMELKNQLLDYWREIHKKAGYVEISTPIMLSR 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
           HLW+ SGHWD Y+ NM+       T+ D   FA+KPMNCPG + V+    +SYR+LP+R+
Sbjct: 300 HLWETSGHWDHYKDNMYT------TVIDDEDFAIKPMNCPGGILVYESEPRSYRDLPLRM 353

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            E G V+R+E SG LHGLMRVR FTQDDAH+F T EQ+ +E   +  LI  +Y  FGF+ 
Sbjct: 354 GELGLVHRHEKSGQLHGLMRVRCFTQDDAHIFMTPEQVRDEIKGVVKLINEVYSLFGFKY 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +GSD  WD A   ++G LD +       +   V  G+GAFYGPK ++ 
Sbjct: 414 H-VELSTRPEDSMGSDEDWDMATEALRGALDDLG------LPYVVNEGDGAFYGPKIDFH 466

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+D+IGR WQCGTIQ+DF LP RFN  Y  +  EK  P+MIHR +FGSIERFIGI+IE+F
Sbjct: 467 LEDSIGRTWQCGTIQLDFQLPLRFNLEYTGADGEKHRPIMIHRVIFGSIERFIGILIEHF 526

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P+Q  V  I+   ++YAQ++ + L +  +  E D R E I YKIRE  +KK
Sbjct: 527 AGAFPTWLAPVQVKVLPISDKYMDYAQKVLDELNNSGVRAEIDTRAEKIGYKIREAQMKK 586

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           IP +++ G KE  +  + IR        + SL D +  +  E      ++
Sbjct: 587 IPYMLVVGAKEEEDGLVSIRSRFEGDEGQKSLTDFLAAIKMEIQAKTARE 636


>gi|74317025|ref|YP_314765.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Thiobacillus
           denitrificans ATCC 25259]
 gi|123731846|sp|Q3SK34|SYT_THIDA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|74056520|gb|AAZ96960.1| threonyl-tRNA synthetase, class IIa [Thiobacillus denitrificans
           ATCC 25259]
          Length = 637

 Score =  672 bits (1734), Expect = 0.0,   Method: Composition-based stats.
 Identities = 319/647 (49%), Positives = 444/647 (68%), Gaps = 15/647 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            + +T PDGS++ F    T ++VA SI   LAK A+A  ++GK+ D S  +  +  + I+
Sbjct: 1   MVTVTLPDGSVRPFEGPVTVAEVASSIGAGLAKAALAGKVDGKLVDTSYVIDADAQLAIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D  +L +IRH  AH+MA+AVQ ++P  QV IGP IEDGFYYDF +EQPF+ ++L +I
Sbjct: 61  TAKDAEALDLIRHDAAHVMAQAVQELYPGTQVTIGPAIEDGFYYDFAREQPFTPEDLEKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES-IPAKENVTLYRQGEWFD 181
           EK+M EI+ RD P  ++  S ++A ++F    E YKV+I++  IP  E +++YRQGEWFD
Sbjct: 121 EKRMDEIVKRDLPIRREVWSRDEAMKVFGDLGETYKVQIIDEVIPKGEELSIYRQGEWFD 180

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           +CRGPH+ STG++ + FKLMK+AGAYWRGDS   ML RIYGTAW  +++L  YL+ LEE+
Sbjct: 181 VCRGPHLPSTGKLPRAFKLMKLAGAYWRGDSKNAMLQRIYGTAWAKKEDLEAYLHRLEEA 240

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
           EKRDHR+LA+++DL H+ ++  G++FWH KGW ++Q +  YMR K  +  Y+E+ TP V+
Sbjct: 241 EKRDHRRLAKQLDLLHMQDEAPGMVFWHPKGWIVWQQIEQYMREKFVEYGYQEVRTPAVM 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D+ +W++SGHW++YR NMF       T  + R +A+KPMNCPGHV +FN GL SYR+LP+
Sbjct: 301 DRSMWEKSGHWENYRDNMFT------TASENRDYAVKPMNCPGHVQIFNSGLHSYRDLPL 354

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLAEFGS +RNEPSG+LHG+MRVRGFTQDDAH+FC +EQ+  E      ++  +Y DFGF
Sbjct: 355 RLAEFGSCHRNEPSGALHGIMRVRGFTQDDAHIFCMEEQVEQEVADFIVMLQKVYADFGF 414

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
             ++VKLSTRP+KRVGSD  WD      K          ++ ++  +  GEGAFYGPK E
Sbjct: 415 NDVLVKLSTRPDKRVGSDESWD------KAESALAAALEKNGLSFDLQPGEGAFYGPKIE 468

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           + LKD +GR WQCGTIQ+DFNLP R  A +V   + +  PVM+HRA+ GS+ERFIGI+IE
Sbjct: 469 FTLKDTLGRLWQCGTIQLDFNLPVRLGAEFVAEDNTRKIPVMLHRAILGSMERFIGILIE 528

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +  GN PLWL+P+Q +V  I+     YA+ +A  L+   +    D  N  INYKIREHS+
Sbjct: 529 HHAGNFPLWLAPVQVMVMNISERQAAYAEAVAEALRRAGIRAALDLSNNKINYKIREHSL 588

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLP 647
           +K+P  ++ GDKE   R + +R  G+    ++ L D I  L  E L 
Sbjct: 589 QKLPYQLVVGDKEMEARVVAVRARGNQDMGQLGLDDLIARLRAEVLA 635


>gi|152996610|ref|YP_001341445.1| threonyl-tRNA synthetase [Marinomonas sp. MWYL1]
 gi|189083612|sp|A6VYI1|SYT_MARMS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|150837534|gb|ABR71510.1| threonyl-tRNA synthetase [Marinomonas sp. MWYL1]
          Length = 645

 Score =  672 bits (1733), Expect = 0.0,   Method: Composition-based stats.
 Identities = 301/647 (46%), Positives = 435/647 (67%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
           MP    +T PDGS ++F    T   VAE I   LAK  VA  I+G++ D  + + + + +
Sbjct: 1   MPV---ITLPDGSQRSFSNPVTVMQVAEDIGPGLAKATVAGRIDGQLVDACELISDDAKL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +DP  + +IRHS AH++  AV+ ++P  Q+AIGP+I++GFYYD   E+PF+ D+L
Sbjct: 58  SIITGKDPEGVEIIRHSFAHLVGHAVKQLYPTAQMAIGPVIDEGFYYDIAYERPFTPDDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGE 178
           A IEK++ E++  D   +K+     +AR+ F  + E+YKV +++ +      V LY   E
Sbjct: 118 AAIEKRIAELVKTDYDVVKRMTPIAEARQQFVDRGESYKVALIDDMDESTKEVGLYYHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +T  ++ F KLMK+AGAYWRGDSN  ML RIYGTAWN ++EL  YL  +
Sbjct: 178 YMDMCRGPHVPNTRVLRHF-KLMKLAGAYWRGDSNNEMLQRIYGTAWNDKKELKGYLTRI 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTP 297
           EE+EKRDHRKL +++DLFH+ E+  G++FWH KGW+++Q +  YMR +++ ++Y+E+ TP
Sbjct: 237 EEAEKRDHRKLGKKLDLFHVQEEAPGMVFWHPKGWRLYQAVEQYMRQKQLDNNYQEVKTP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           Q++D+ LW++SGHW  Y  NMF       T  + R +A+KPMNCP H+ V+N GLKSYR+
Sbjct: 297 QIVDRVLWEKSGHWGKYHENMFT------THSENRDYAVKPMNCPCHIQVYNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP R+AEFGS +RNEPSG+LHG+MRVR F QDD H+F T+ Q+  E  +  +L+  +Y D
Sbjct: 351 LPFRMAEFGSCHRNEPSGALHGIMRVRNFVQDDGHIFVTEGQIQQEVSEFIDLLHEVYAD 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF+ I+ +LSTRPE+RVGSD +WD AE  +   LD+        ++   L GEGAFYGP
Sbjct: 411 FGFDNIVYRLSTRPEQRVGSDEVWDKAEKALSEALDSAG------LDWEELPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ LKDAIGR WQCGTIQVDF++P+R  A YV+    +  PVM+HRA+ GS+ERFIGI
Sbjct: 465 KIEFSLKDAIGRVWQCGTIQVDFSMPTRLGAQYVSEDGSRQTPVMLHRAIVGSLERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE+ +G  P+WL+P Q ++  IT    +Y   +   L S+    + D RNE I +KIRE
Sbjct: 525 LIEDTEGAFPVWLAPEQVVIMNITDRQADYCSVLEKRLNSNGFRAKLDLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H+++++P +I+ GDKE  +  + +R         +S+ D   +L +E
Sbjct: 585 HTLQRVPYMIVVGDKEVEQEQVAVRTRTGEDLGVMSISDFEGLLQQE 631


>gi|331007295|ref|ZP_08330496.1| Threonyl-tRNA synthetase [gamma proteobacterium IMCC1989]
 gi|330418902|gb|EGG93367.1| Threonyl-tRNA synthetase [gamma proteobacterium IMCC1989]
          Length = 640

 Score =  672 bits (1733), Expect = 0.0,   Method: Composition-based stats.
 Identities = 292/641 (45%), Positives = 420/641 (65%), Gaps = 16/641 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS ++F    +  +VA  I   LAK  +A ++NG   D  DP+  +  + I T +
Sbjct: 4   ITLPDGSQRSFDRPVSVYEVAADIGPGLAKATIAGSVNGVRVDAHDPIENDAELTIFTSK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L ++RHSCAH++  AV+ +WPE ++AIGP IE+GFYYD D +   + +++ +IEK+
Sbjct: 64  DEDGLEILRHSCAHLIGHAVKQLWPEAKMAIGPTIENGFYYDIDLDHMLTDEDMDKIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE-SIPAKENVTLYRQGEWFDLCR 184
           M+E+I      +K+  S + A + F+++ E YK+EILE  IP      LY   E+ D+CR
Sbjct: 124 MRELIKTQYDVVKKVGSWQDAYDAFKARGEEYKLEILERDIPKDATPALYHHEEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +    + F KLM+++GAYWRGDS+  ML RIYGTAW  +++L  +L+FLEE+ KR
Sbjct: 184 GPHVPNMKFCEHF-KLMRISGAYWRGDSDNKMLQRIYGTAWPDKKKLKAHLHFLEEAVKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQH 303
           DHRKL ++ D FH+ E+  G++FWH KGW I+ T+  YMR+ +  + Y+EI TPQV+D+ 
Sbjct: 243 DHRKLGKKFDYFHMQEEAPGMVFWHPKGWSIYATIEEYMRKVQRDNGYKEIKTPQVVDRS 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SGHWD +R NMF V+       + R +A+KPMNCP HV VFN GLKSY+ELP+RLA
Sbjct: 303 LWERSGHWDKFRDNMFTVE------SESRDYAIKPMNCPCHVQVFNQGLKSYKELPLRLA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNE SG+L GLMRVRGF QDDAH+FC++E +  E     +L+  +Y DFGF  +
Sbjct: 357 EFGSCHRNEASGTLQGLMRVRGFVQDDAHIFCSEEAIQEEVSVFTDLLYKVYADFGFSDV 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +++LSTRPE+RVG++  WD AE  +   LD         +    L GEGAFYGPK E+ L
Sbjct: 417 IIRLSTRPEQRVGTEEGWDKAEKALADALDA------KGLPWEELPGEGAFYGPKIEFSL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D + R WQCGTIQVDF++P R +A YV     +  PVM+HRA+ GS ERFIGI+IE+++
Sbjct: 471 RDCLNRVWQCGTIQVDFSMPGRLDAQYVAEDGSRQVPVMLHRAILGSFERFIGILIEHYE 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P Q  +  IT +  EY Q+    L+     + +D RNE I +KIREH++++I
Sbjct: 531 GAFPTWLAPEQVAILNITDNQSEYVQKTEKALRDKGFRVISDLRNEKIGFKIREHTLQRI 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P +++ GDKE    ++ +R         +S+   +  L  +
Sbjct: 591 PYLLVIGDKEVENNALAVRTRTGEDLGVMSIDAFVAHLNAD 631


>gi|253682125|ref|ZP_04862922.1| threonine--tRNA ligase [Clostridium botulinum D str. 1873]
 gi|253561837|gb|EES91289.1| threonine--tRNA ligase [Clostridium botulinum D str. 1873]
          Length = 637

 Score =  672 bits (1733), Expect = 0.0,   Method: Composition-based stats.
 Identities = 296/643 (46%), Positives = 417/643 (64%), Gaps = 16/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEII 62
            IK+T  DG +       T S++A  IS SL KKA+   ING+  +L D + +  S+EI+
Sbjct: 1   MIKITLKDGKVLEMEKGLTVSEIAARISTSLRKKALGAKINGEKGELMDVINDDCSLEIL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T ED      +RH+ +HI+A+AV+ ++P+V++AIGP IE+GFYYDFD E  F+ + L +I
Sbjct: 61  TFEDQEGKDTLRHTASHILAQAVKRLYPDVKLAIGPSIENGFYYDFDAEFSFTPEILEKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M +I+  +    K  L  ++A +  + + E YKVE++E +P    ++ Y +GE+ DL
Sbjct: 121 EKEMNKIVKENLELKKFTLPRDEAIKFMKERNEDYKVELIEDLPEDAVISFYEEGEFVDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPHV ST +VK   KL+ VAGAYWRG+ N  ML RIYGTA+  + +L QYL+ LEE++
Sbjct: 181 CAGPHVPSTKEVK-AIKLLSVAGAYWRGNENNKMLQRIYGTAFTKKADLEQYLHMLEEAK 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KRDHRKL +E+ LF + E+G G  F++ KG  +  TL +Y R    K  Y EI TP +L+
Sbjct: 240 KRDHRKLGKELGLFDLKEEGPGFPFFYPKGMTLRNTLENYWREMHEKAGYGEIRTPIILN 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           ++LW QSGHWD Y+ NM+  K       D   +A+KPMNCPG + V+   L SYRELP+R
Sbjct: 300 ENLWHQSGHWDHYKENMYFTKI------DGEDYAIKPMNCPGSILVYKSDLHSYRELPIR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           L E G V+R+E SG+LHGLMRVR FTQDDAH+F TKEQ+ +E L +  +I + Y  FGFE
Sbjct: 354 LGELGLVHRHEYSGALHGLMRVRNFTQDDAHIFMTKEQITSEILGVIKMIDNFYSLFGFE 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPE  +GSD  W+ A N +   L+         +   +  G+GAFYGPK ++
Sbjct: 414 YF-VELSTRPEDSMGSDEDWEAATNGLVKALNEAG------LEYKINEGDGAFYGPKIDF 466

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L+D +GR WQCGTIQ+DF +P RF+  YV +  EK  PVM HR +FGSIERFIGI+ E+
Sbjct: 467 HLRDCLGRTWQCGTIQLDFQMPERFDLSYVGADGEKHRPVMAHRVIFGSIERFIGILTEH 526

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  P WL+P+Q  +  IT + +EY +EI   LK + + +E D RNE I YKIRE  ++
Sbjct: 527 YAGAFPTWLAPVQVKIMNITDNQIEYCKEIEKTLKENGIRVELDLRNEKIGYKIREAQLQ 586

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIP +++ GDKE +E +I +R         + L+D + ++ KE
Sbjct: 587 KIPYMLVLGDKEMNENTIAVRSRKQGDLGAMQLVDFVAMVKKE 629


>gi|221639813|ref|YP_002526075.1| threonyl-tRNA synthetase [Rhodobacter sphaeroides KD131]
 gi|254783534|sp|B9KKC7|SYT_RHOSK RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|221160594|gb|ACM01574.1| Threonyl-tRNA synthetase [Rhodobacter sphaeroides KD131]
          Length = 646

 Score =  672 bits (1733), Expect = 0.0,   Method: Composition-based stats.
 Identities = 320/650 (49%), Positives = 438/650 (67%), Gaps = 10/650 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           + I LTFPDG  + FP   T ++VA SIS SL KKA++ +++G+  DL  P+  +  I I
Sbjct: 2   AQISLTFPDGKAREFPAGITPAEVAASISTSLGKKAISASVDGRHYDLQWPIETDAKIAI 61

Query: 62  ITPEDP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            T  D  ++L +IRH  AHIMA AVQ +WP+V+V IGP++ +G+YYDFD+++ F+ ++L 
Sbjct: 62  HTMADEAQALELIRHDLAHIMARAVQELWPDVKVTIGPVVANGWYYDFDRDETFTPEDLG 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEK+M+EII        +     +A   +E + E +KVE++++IP  +++ +Y  G W 
Sbjct: 122 AIEKRMKEIINAREAVKTELWERARAIAYYEERGEPFKVELVQAIPEDQSIRMYWHGGWQ 181

Query: 181 DLCRGPHVRSTGQ-VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           DLCRGPH++ TGQ     FKLM VAGAYWRGDS    L RIYG A+ T+ EL  YL+ LE
Sbjct: 182 DLCRGPHLQHTGQVPADAFKLMSVAGAYWRGDSANKQLQRIYGVAFKTRDELKAYLHMLE 241

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQ 298
           E+ KRDHRKL REM+LFH+ E+  G++FWH  GW+I++TL  YMR R  +  Y+EI TPQ
Sbjct: 242 EAAKRDHRKLGREMELFHLQEEAPGMVFWHPNGWQIYRTLEDYMRGRLRQAGYKEIRTPQ 301

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW+ SGHW++Y+ NMF V+  ++  K+ R  ALKPMNCP HV V+N GLKSYR+L
Sbjct: 302 VVDRKLWEASGHWEAYKENMFIVEVEEEHAKEKRINALKPMNCPCHVQVYNQGLKSYRDL 361

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFGS +R E SGS+HGLMRVRGF QDDAH+FCT++Q+ +EC     L+ S+YKD 
Sbjct: 362 PLRLAEFGSCHRYESSGSMHGLMRVRGFVQDDAHIFCTEDQIESECAAFIELLSSVYKDL 421

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+   +KLSTRPE R+GSD  WD  E  ++  +  +  +        +  GEGAFYGPK
Sbjct: 422 GFDSFEIKLSTRPEVRIGSDEAWDKVETALENAIRKVGAA------YEIDPGEGAFYGPK 475

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++ L DAIGR WQCGT QVD NLP+R  A Y+     K  P M+HRA+ GS ERFIGI+
Sbjct: 476 LDFKLTDAIGRKWQCGTFQVDPNLPTRLGAEYIGEDGAKHRPYMLHRAILGSFERFIGIL 535

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IEN+ G LP WL+P Q +V +I S A  Y  E+   L++  +  E D RNE INYK+REH
Sbjct: 536 IENYAGKLPFWLAPRQVVVASIVSDADPYVAEVVAALRARGVRAEADTRNEKINYKVREH 595

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
           S+ K+P+I+  G +E   RS+ +RR G T T+ + L   +  L  ++  P
Sbjct: 596 SVGKVPVILAIGMQEVEARSVSVRRLGETRTESMGLDQVVDQLAADARIP 645


>gi|163746007|ref|ZP_02153366.1| threonyl-tRNA synthetase [Oceanibulbus indolifex HEL-45]
 gi|161380752|gb|EDQ05162.1| threonyl-tRNA synthetase [Oceanibulbus indolifex HEL-45]
          Length = 648

 Score =  672 bits (1733), Expect = 0.0,   Method: Composition-based stats.
 Identities = 321/653 (49%), Positives = 429/653 (65%), Gaps = 10/653 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           + I LT PDG+ + +    T  +VA  IS+SL KKA++  +NG   DL+ P+  +  I I
Sbjct: 2   AQISLTLPDGNSRQYDAGITAGEVAADISKSLGKKAISATVNGAHFDLAWPIEADADIAI 61

Query: 62  ITPEDP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            T  D  ++  ++RH  AHIMA AVQ IWP+ +V IGP+I+DG+YYDFD+++PF+ ++L 
Sbjct: 62  HTMADEVQANELVRHDLAHIMARAVQEIWPDTKVTIGPVIKDGWYYDFDRKEPFTPEDLG 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEKKM+EII +      +     +A + +E   E YKVE++ +IP  E + +Y  G+W 
Sbjct: 122 AIEKKMKEIINKRDAVRTEVWDRARAIKHYEDLNEPYKVELINAIPGDEPLRMYWHGDWQ 181

Query: 181 DLCRGPHVRSTGQ-VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           DLCRGPH++ TGQ     FKLM +AGAYWRGDS+R ML RIYG A+  +++L  +L  LE
Sbjct: 182 DLCRGPHLQHTGQVPGDAFKLMSIAGAYWRGDSDRAMLQRIYGVAFTGKEKLRAHLNMLE 241

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQ 298
           E+ KRDHRKL REMDLFH+ E+  G IFWH  GW I+  L  YMRR+ +   Y E+NTPQ
Sbjct: 242 EAAKRDHRKLGREMDLFHMQEEAPGQIFWHPNGWSIYTQLQDYMRRQQRKGGYVEVNTPQ 301

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW+ SGHW+ Y+ +MF V+  ++  ++    ALKPMNCP HV +FN GLKSYR+L
Sbjct: 302 VVDRKLWEASGHWEKYQDHMFIVEVDEEHAREKAVNALKPMNCPCHVQIFNQGLKSYRDL 361

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFGS  R EPSG+LHG+MRVRGFTQDD H+FC ++Q+  E  K    +  IY+D 
Sbjct: 362 PLRMAEFGSCNRYEPSGALHGIMRVRGFTQDDGHIFCAEDQIEAETAKFIAFLSEIYRDL 421

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE   VK S RPEKR GSD +WD AE  +              I   +  GEGAFYGPK
Sbjct: 422 GFENFKVKFSDRPEKRSGSDEVWDKAEAALLSATRAAG------IEPELNPGEGAFYGPK 475

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E++L DAIGRDWQCGT QVDF LP R +A Y+ +   K  PVM+HRA  GS ERFIGI+
Sbjct: 476 LEFVLTDAIGRDWQCGTHQVDFVLPERLDATYIGADGGKHRPVMLHRATLGSFERFIGIL 535

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE   G LP WL+P Q +V +ITS A +Y  E+   LK+  +  E D RNE INYK+REH
Sbjct: 536 IEEHAGKLPFWLAPRQVVVASITSEADDYVAEVVETLKAAGVRAEADMRNEKINYKVREH 595

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           S+ K+P+I+  G +E  ER++ +RR G   T    L      L +++ PPD +
Sbjct: 596 SVGKVPVILAVGAREVEERTVSVRRLGQKQTSVQPLDTLTAELAQDATPPDLR 648


>gi|294667581|ref|ZP_06732796.1| threonyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|292602701|gb|EFF46137.1| threonyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
          Length = 634

 Score =  672 bits (1733), Expect = 0.0,   Method: Composition-based stats.
 Identities = 290/644 (45%), Positives = 422/644 (65%), Gaps = 16/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +T PDGS + F    +   VA+SI   LAK  +A  ++G++ D SD +  + S+ II
Sbjct: 1   MINITLPDGSRREFESPVSVMQVAQSIGAGLAKATIAGQVDGQLVDASDVIDHDASLRII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   + +IRHSCAH++  AV+ ++PEV++ IGP+I +GFYYD   E+PF+ +++A I
Sbjct: 61  TAKDAEGVEIIRHSCAHLVGHAVKQLYPEVKMVIGPVIAEGFYYDIYSERPFTPEDMAAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-ENVTLYRQGEWFD 181
           E++MQE+IA+D   +K+     +  E+F  + E YK+ ++E +      + LY   E+ D
Sbjct: 121 EQRMQELIAQDYDVIKKVTPRAEVIEVFAQRGEEYKLRLIEDMSEDITAMGLYYHQEYVD 180

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           +CRGPHV +T  +K F KL +++GAYWRGD+    L RIYGTAW  +++L  Y+  +EE+
Sbjct: 181 MCRGPHVPNTRFLKAF-KLTRISGAYWRGDAKNEQLQRIYGTAWADKKQLDAYILRMEEA 239

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
           +KRDHR++ +  DLFH+ E+  G++FWH KGW ++Q +  YMR+  +D  Y E+  PQ+L
Sbjct: 240 DKRDHRRIGKAQDLFHLQEEAPGLVFWHPKGWSLWQVVEQYMRKVYRDSGYGEVRCPQIL 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D  LWQ+SGHWD+Y+  MF       T  + RT+A+KPMNCPGHV VFN GL SYR+LP+
Sbjct: 300 DVSLWQKSGHWDNYQDAMFF------TESEKRTYAVKPMNCPGHVQVFNQGLHSYRDLPI 353

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R  EFG+ +RNEPSG+LHG++RVRGFTQDD HVFC + Q+ +E    H   +++Y  FGF
Sbjct: 354 RYGEFGACHRNEPSGALHGILRVRGFTQDDGHVFCLESQIESEVTAFHQQALAVYTAFGF 413

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           + I +K++ RPEKR+G DA WD AE+ ++  L          +    L GEGAFYGPK E
Sbjct: 414 DDIQIKIALRPEKRLGDDATWDKAESALRSAL------GVCGVEWQELPGEGAFYGPKIE 467

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           Y LKDAIGR WQ GT+QVDF +P R  A YV+ +S+K HPVM+HRA+ GS+ERFIGI+IE
Sbjct: 468 YHLKDAIGRTWQLGTMQVDFMMPGRLGAEYVDENSQKKHPVMLHRAIVGSMERFIGILIE 527

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +  G  P WL+P+Q +V  IT +  EY   +   L +    +  D RNE I YKIREH++
Sbjct: 528 HHAGAFPSWLAPVQVVVANITDAQAEYVDSVRKTLANQGFRVSADLRNEKIGYKIREHTM 587

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +++P +++ GD+E    ++ +R         +++   I  L  E
Sbjct: 588 QRVPYLLVVGDREKENGAVAVRTRSGEDLGTMTVSAFIERLQAE 631


>gi|238753686|ref|ZP_04615048.1| Threonyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
 gi|238708238|gb|EEQ00594.1| Threonyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
          Length = 642

 Score =  672 bits (1733), Expect = 0.0,   Method: Composition-based stats.
 Identities = 294/647 (45%), Positives = 429/647 (66%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS ++F    +  DVA  I   LAK  +A  +NG++ D +D +  +  +
Sbjct: 1   MPV---ITLPDGSQRHFDRAVSVLDVALDIGPGLAKACIAGRVNGELMDATDLIESDAQL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L ++RHSCAH++  A++ +WP  ++AIGP I++GFYYD D EQ  + ++L
Sbjct: 58  AIITAKDAEGLEILRHSCAHLLGHAIKQLWPNTKMAIGPTIDNGFYYDVDLEQTLTQEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M E+  +D   +K+ +S ++AR+ F ++ E YKV IL E+I   +   LY   E
Sbjct: 118 DLLEKRMHELADKDYDVIKKKVSWQEARDTFAARGEEYKVAILDENISRDDRPGLYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KL K +GAYWRGDS   ML RIYGTAW  +++L  YL  L
Sbjct: 178 YVDMCRGPHVPNMRFCHHF-KLQKTSGAYWRGDSKNKMLQRIYGTAWADKKQLNAYLQRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF+ L +++R K+K+  Y+E+  P
Sbjct: 237 EEAGKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELETFVRSKLKEYQYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW+++GHW++Y  +MF       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 297 FMMDRVLWEKTGHWENYAEHMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSG+LHGLMRVRGFTQDDAHVFCT+EQ+ +E      ++  +Y  
Sbjct: 351 LPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHVFCTEEQVRDEVNSCIKMVYDMYST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI+VKLSTRPEKR+GSD LW  AE+ +   L      +++ I      GEGAFYGP
Sbjct: 411 FGFEKIVVKLSTRPEKRIGSDELWTRAEDDLAAAL------TENGIPFDYQPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF+LP R +A Y+  ++++  PVMIHRA+ GS+ERFIGI
Sbjct: 465 KIEFTLHDCLDRAWQCGTVQLDFSLPGRLSASYIGENNDRQVPVMIHRAILGSMERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E + G  P W++P+Q +V  IT S  EY QE+   L+   + ++ D RNE I +KIRE
Sbjct: 525 LTEEYAGFFPTWIAPVQVVVMNITDSQAEYVQEVTKKLQDAGIRVKADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H+++++P +++CGDKE     + +R         + +   +  L  E
Sbjct: 585 HTLRRVPYMLVCGDKEIETGKVAVRTRRGKDLGSLDVNVVVDKLLTE 631


>gi|284037110|ref|YP_003387040.1| threonyl-tRNA synthetase [Spirosoma linguale DSM 74]
 gi|283816403|gb|ADB38241.1| threonyl-tRNA synthetase [Spirosoma linguale DSM 74]
          Length = 647

 Score =  672 bits (1733), Expect = 0.0,   Method: Composition-based stats.
 Identities = 267/652 (40%), Positives = 402/652 (61%), Gaps = 19/652 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
             I++T PDGS++ +P  +TG D+A  IS  LA+  +A  +NG + D + P+  + S+++
Sbjct: 6   EQIRVTLPDGSVREYPKGSTGLDIATKISEGLARNVLAAKVNGVIQDATRPIDEDASVQL 65

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELA 120
           +T  D    A   HS AH++AEA++S++P V+  IGP IE GFYYD D   QPFS ++  
Sbjct: 66  LTWNDAEGKATFWHSSAHLLAEALESLYPGVKFGIGPAIETGFYYDVDLGGQPFSQEDFK 125

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           ++E KM E+  +   ++++ +S   A   FE K + YK+++LE +     +T Y QG++ 
Sbjct: 126 KVEDKMLELARQKQQYIRKPMSKADAIAYFEEKGDPYKLDLLEGL-DDGTITFYTQGDFT 184

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ +TG +K   KLM VAGAYWRG+     L+RIY   +  Q+EL  YL+ LEE
Sbjct: 185 DLCRGPHIPNTGFIKAA-KLMNVAGAYWRGNEKNKQLTRIYAVTYPKQKELDDYLFLLEE 243

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           ++KRDHRKL +E++LF  +E    G+  W  KG  + + L +++R+ +++  Y  + TP 
Sbjct: 244 AKKRDHRKLGKELELFAFSEKVGAGLPLWLPKGTVLRERLENFLRKAQVRAGYSPVVTPH 303

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +  + L+  SGHW+ Y  + F       T      F LKPMNCP H  ++    +SYR+L
Sbjct: 304 IGSKQLYVTSGHWEKYGEDSFQ---PIRTPDPNEEFLLKPMNCPHHCEIYKTKPRSYRDL 360

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFG+VYR E SG LHGL RVRGFTQDDAH+FC  +Q+  E +K+ +L++ ++   
Sbjct: 361 PLRLAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCRPDQVKEEFMKVIDLVLYVFNTL 420

Query: 419 GFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           GF     ++S R  +     +GSD LW+      K     I+ +++  + T   LGE AF
Sbjct: 421 GFSDYSAQISLRDPENKTKYIGSDDLWE------KAESAIIEAAAEKGLPTVTELGEAAF 474

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +++++DAIGR WQ GTIQVD+NLP+RF   Y+ + ++K  PVMIHRA FGS+ERF
Sbjct: 475 YGPKLDFMVRDAIGRKWQLGTIQVDYNLPNRFELEYIGADNQKHRPVMIHRAPFGSMERF 534

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
           I I+IEN  GN PLWLSP Q  +  I+    +YA ++   L+ + +    D R+E I  K
Sbjct: 535 IAILIENSGGNFPLWLSPDQIAILPISEKYEDYANDLFFSLQENDIRGFVDLRDEKIGRK 594

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           IR+  + K+P ++I G+KEA+E ++ +RR G      + + D I    +E  
Sbjct: 595 IRDAEVNKVPYMLIVGEKEAAEGTVSVRRKGQGDLGSMPIADFIQTFKREVT 646


>gi|21243325|ref|NP_642907.1| threonyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str.
           306]
 gi|25453288|sp|Q8PJE1|SYT_XANAC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|21108867|gb|AAM37443.1| threonyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str.
           306]
          Length = 634

 Score =  672 bits (1733), Expect = 0.0,   Method: Composition-based stats.
 Identities = 290/644 (45%), Positives = 421/644 (65%), Gaps = 16/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +T PDGS + F    +   VA+SI   LAK  +A  ++G++ D SD +  + S+ II
Sbjct: 1   MINITLPDGSRREFESPVSVMQVAQSIGAGLAKATIAGQVDGQLVDASDVIDHDASLRII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   + +IRHSCAH++  AV+ ++PEV++ IGP+I +GFYYD   E+PF+ +++A I
Sbjct: 61  TAKDAEGVEIIRHSCAHLVGHAVKQLYPEVKMVIGPVIAEGFYYDIYSERPFTPEDMAAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-ENVTLYRQGEWFD 181
           E++MQE+IA+D   +K+     +  E+F  + E YK+ ++E +      + LY   E+ D
Sbjct: 121 EQRMQELIAQDYDVIKKVTPRAEVIEVFAQRGEEYKLRLIEDMSEDITAMGLYYHQEYVD 180

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           +CRGPHV +T  +K F KL +++GAYWRGD+    L RIYGTAW  +++L  Y+  +EE+
Sbjct: 181 MCRGPHVPNTRFLKAF-KLTRISGAYWRGDAKNEQLQRIYGTAWADKKQLDAYILRMEEA 239

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
           +KRDHR++ +  DLFH+ E+  G++FWH KGW ++Q +  YMR+  +D  Y E+  PQ+L
Sbjct: 240 DKRDHRRIGKAQDLFHLQEEAPGLVFWHPKGWSLWQVVEQYMRKVYRDSGYGEVRCPQIL 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D  LWQ+SGHWD+Y+  MF       T  + RT+A+KPMNCPGHV VFN GL SYR+LP+
Sbjct: 300 DVSLWQKSGHWDNYQDAMFF------TESEKRTYAVKPMNCPGHVQVFNQGLHSYRDLPI 353

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R  EFG+ +RNEPSG+LHG++RVRGFTQDD HVFC + Q+ +E    H   +++Y  FGF
Sbjct: 354 RYGEFGACHRNEPSGALHGILRVRGFTQDDGHVFCLEPQIESEVTAFHQQALAVYTAFGF 413

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           + I +K++ RPEKR+G DA WD AE  ++  L          +    L GEGAFYGPK E
Sbjct: 414 DDIQIKIALRPEKRLGDDATWDKAEAALRSAL------GVCGVEWQELPGEGAFYGPKIE 467

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           Y LKDAIGR WQ GT+QVDF +P R  A YV+ +S+K HPVM+HRA+ GS+ERFIGI+IE
Sbjct: 468 YHLKDAIGRTWQLGTMQVDFMMPGRLGAEYVDENSQKKHPVMLHRAIVGSMERFIGILIE 527

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +  G  P WL+P+Q +V  IT +  EY   +   L +    +  D RNE I YKIREH++
Sbjct: 528 HHAGAFPSWLAPVQVVVANITDAQAEYVDSVRKTLANQGFRVSADLRNEKIGYKIREHTL 587

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +++P +++ GD+E    ++ +R         +++   I  L  E
Sbjct: 588 QRVPYLLVVGDREKENGAVAVRTRSGEDLGTMTVSAFIERLQAE 631


>gi|310827810|ref|YP_003960167.1| threonyl-tRNA synthetase [Eubacterium limosum KIST612]
 gi|308739544|gb|ADO37204.1| threonyl-tRNA synthetase [Eubacterium limosum KIST612]
          Length = 637

 Score =  672 bits (1733), Expect = 0.0,   Method: Composition-based stats.
 Identities = 269/641 (41%), Positives = 408/641 (63%), Gaps = 16/641 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           + +T  DGS+K +    T  DVA+ IS  LA+  +A  +NG++ D+  P+  + ++ ++T
Sbjct: 1   MNITLKDGSVKQYEPGITVYDVAKDISEGLARNTMAGELNGELVDIRKPITEDSTLNLLT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +         HS +H+MA+A++ +WPE Q+ IGP I++GFYYD D E   + ++L +IE
Sbjct: 61  FDSEGGKHAFWHSASHLMAQAIKRLWPEAQLTIGPAIDNGFYYDIDLEHTLTPEDLEKIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M++I+           S E A +  E++ E YK E++ ++P    ++ Y QGEW DLC
Sbjct: 121 KEMKKIVKEAPEIEYYTKSREDALKWAEAEGETYKTELINNLPEDAVISFYGQGEWADLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+R+  Q+K F KL+ +AGAYW GD+N  ML R+YG A+  + EL +YL  LEE++K
Sbjct: 181 AGPHIRNASQIKAF-KLLSLAGAYWHGDANNKMLQRVYGIAFPKKSELDEYLQRLEEAKK 239

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQ 302
           RDHRKL +E+DLF + E+G G  F+H KG  +   L ++ R   +K  Y+EI TP +L+ 
Sbjct: 240 RDHRKLGKELDLFSMHEEGPGFPFFHPKGMVLRNELENFWRSEHMKKGYKEIKTPIMLNA 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD+Y+ NM+       T  D + FA+KPMNCPG + V+     SYRELP+R+
Sbjct: 300 DLWRRSGHWDNYKENMYF------TEIDGQEFAVKPMNCPGGMLVYKTRQHSYRELPLRM 353

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            E G V+R+E  G+LHGLMRVR FTQDDAH+F T +Q+ +E + I +L   IY  FGF+ 
Sbjct: 354 GELGQVHRHELHGALHGLMRVRTFTQDDAHIFLTMDQVKDEVIGIIDLANEIYDIFGFKY 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LST+PEK +G D  W+ A + ++  L+         ++  +  G+GAFYGPK ++ 
Sbjct: 414 -KVELSTKPEKAIGKDEDWEVATDALREALEA------KGMDYQLNPGDGAFYGPKIDFH 466

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+D+IGR WQCGTIQ+D  +P RF+  YV S  EK  PV++HR +FGSIERF+GI+IE+F
Sbjct: 467 LEDSIGRTWQCGTIQLDMQMPERFDLTYVGSDGEKHRPVILHRTIFGSIERFLGILIEHF 526

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  PLWL+P+Q  +  ++ +   + +EIA  L+   + +E DFR+E I Y+IRE  ++K
Sbjct: 527 AGKFPLWLAPVQVQLIPVSDAHDAFTKEIAAKLEEAGIRVEIDFRDEKIGYRIREAQMQK 586

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           IP +++ GDKE     + IR   +   + + + +    L +
Sbjct: 587 IPYMLVIGDKEVESGRLSIRNRDTGEQETLKIDEFKYRLAQ 627


>gi|285017864|ref|YP_003375575.1| threonyl-tRNA synthetase (threonine--tRNA ligase) protein
           [Xanthomonas albilineans GPE PC73]
 gi|283473082|emb|CBA15587.1| probable threonyl-trna synthetase (threonine--trna ligase) protein
           [Xanthomonas albilineans]
          Length = 634

 Score =  672 bits (1733), Expect = 0.0,   Method: Composition-based stats.
 Identities = 298/644 (46%), Positives = 430/644 (66%), Gaps = 16/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +T PDGS ++F    +  +VA+SI   LAK  +A  ++G++ D SD +  + ++ +I
Sbjct: 1   MITITLPDGSRRDFEHPVSPMEVAQSIGPGLAKATIAGQVDGRLVDASDLIDHDANLRLI 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   + +IRHSCAH++  AV+ ++PE ++ IGP+I +GFYYD    +PF+ +++A I
Sbjct: 61  TAKDEEGVDIIRHSCAHLVGHAVKQLYPEAKMVIGPVIAEGFYYDIYSARPFTPEDMAAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-ENVTLYRQGEWFD 181
           E++MQE+IA+D   +K+     +  E+F+ + E YK+ ++  +P     + LY   E+ D
Sbjct: 121 ERRMQELIAQDYDVIKKVTPRAEVIEVFQQRGEDYKLRLIADMPEDVTAMGLYYHQEYVD 180

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           +CRGPHV +T  +K F KL +++GAYWRGD+    L RIYGTAW  +++L  Y+  +EE+
Sbjct: 181 MCRGPHVPNTRFLKAF-KLTRISGAYWRGDAKNEQLQRIYGTAWADKKQLDAYILRMEEA 239

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVL 300
           +KRDHRK+A+ +DLFH+ E+G G++FWH KGW I+Q +  YMR+  + + Y E+  PQ+L
Sbjct: 240 DKRDHRKIAKALDLFHLQEEGPGLVFWHPKGWSIWQVVEQYMRKVYRDNGYGEVRCPQIL 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D  LWQQSGHWD+Y+ NMF       T  + RT+A+KPMNCPGHV VFN GL SYR+LP+
Sbjct: 300 DVSLWQQSGHWDNYQDNMFF------TESEKRTYAVKPMNCPGHVQVFNQGLHSYRDLPI 353

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R  EFG+ +RNEPSG+LHG++RVRGFTQDD H+FCT++Q+  E    H   + +Y DFGF
Sbjct: 354 RYGEFGACHRNEPSGALHGILRVRGFTQDDGHIFCTEQQIEAEVTAFHRQALKVYTDFGF 413

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           + I +K++ RPEKR+G DA WD AE  ++  L          +    L GEGAFYGPK E
Sbjct: 414 DDIQIKIALRPEKRLGEDATWDKAEAALRAALGACG------VEWQELPGEGAFYGPKIE 467

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           Y LKDAIGR WQ GT+QVDF +P R  A YV+ HS+K HPVM+HRA+ GS+ERFIGI+IE
Sbjct: 468 YHLKDAIGRTWQLGTMQVDFMMPGRLGAEYVDEHSQKRHPVMLHRAIVGSMERFIGILIE 527

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +  G  P WL+P+QA+V  IT +  +Y   +  LL +    IE D RNE I YKIREH++
Sbjct: 528 HHAGVFPAWLAPVQAMVMNITDAQADYVDSVRKLLANQGFRIEADLRNEKIGYKIREHTL 587

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +++P +++ GD+E    +I +R         +S+ D    L  E
Sbjct: 588 QRVPYLLVVGDREKENGAIAVRTRSGEDLGTMSVADFAERLRAE 631


>gi|153814564|ref|ZP_01967232.1| hypothetical protein RUMTOR_00778 [Ruminococcus torques ATCC 27756]
 gi|317501270|ref|ZP_07959474.1| threonine-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|145848058|gb|EDK24976.1| hypothetical protein RUMTOR_00778 [Ruminococcus torques ATCC 27756]
 gi|316897337|gb|EFV19404.1| threonine-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA]
          Length = 641

 Score =  672 bits (1733), Expect = 0.0,   Method: Composition-based stats.
 Identities = 284/650 (43%), Positives = 407/650 (62%), Gaps = 16/650 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K+T  DGS K +    +  ++A  IS  LA+ A A  I+G+  DL   V ++  + I+T
Sbjct: 1   MKITLKDGSSKEYAQPMSVYEIALDISEGLARVATAGEIDGEEVDLRTVVDKDCELNILT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
             D +     RH+ +HIMA+A++ ++P+ ++AIGP I DGFYYD DKE P ++++L +IE
Sbjct: 61  FNDEKGKGAFRHTASHIMAQAIKRLYPDAKLAIGPSIADGFYYDIDKETPLTAEDLDKIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M++I+  +    +  +  E+A   F+ K E YKVE++E +P  E ++ Y QGE+ DLC
Sbjct: 121 AEMKKIVKENLEIKQYTMPREEAIAYFKEKNEPYKVELIEDLPEGETISFYSQGEFTDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+ +T  VK F KL  +AGAYWRGD +  ML RIYGTA++ + EL +YL  +EE++K
Sbjct: 181 AGPHLMTTKPVKAF-KLTSLAGAYWRGDEHNKMLQRIYGTAFSKKAELEEYLTMIEEAKK 239

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           RDHRKL +E+ LF + E+G G  F+   G  +  TL+ Y R    +  Y EINTP +L +
Sbjct: 240 RDHRKLGKELGLFMMREEGPGFPFFLPNGMVLKNTLLDYWREIHRRAGYVEINTPIMLSR 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
           HLW+ SGHWD Y+ NM+       T+ D   FA+KPMNCPG + V+    +SYR+LP+R+
Sbjct: 300 HLWETSGHWDHYKENMYT------TVVDEEDFAIKPMNCPGGILVYESEPRSYRDLPIRM 353

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            E G V+R+E SG LHGLMRVR FTQDDAH+F T EQ+ +E   +  LI  +Y  FGF+ 
Sbjct: 354 GELGLVHRHEKSGQLHGLMRVRCFTQDDAHIFMTPEQIKDEIKGVVKLIDEVYSLFGFKY 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRP+  +GSD  W+ A + ++  LD I       +   V  G+GAFYGPK ++ 
Sbjct: 414 H-VELSTRPDDSMGSDEDWEMATDALRSALDDIG------LPYIVNEGDGAFYGPKIDFH 466

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+D+IGR WQCGTIQ+DF LP RF   Y  +  EK  P+MIHR VFGSIERFIGI+IE+F
Sbjct: 467 LEDSIGRTWQCGTIQLDFQLPLRFELEYTGADGEKHRPIMIHRVVFGSIERFIGILIEHF 526

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P+Q  V  I+   ++YA ++   LK   +  E D R E I YKIRE  +KK
Sbjct: 527 AGAFPTWLAPVQVKVLPISDKYLDYAGKVLEDLKEAGIRAEIDSRAEKIGYKIREAQMKK 586

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           IP +++ G KE  E  + +R   +    +  L + I  + +E      ++
Sbjct: 587 IPYMLVVGAKEEEEGKVSVRSRFAGDEGQCGLEEFIEQIKEEVAAKKLRE 636


>gi|146293114|ref|YP_001183538.1| threonyl-tRNA synthetase [Shewanella putrefaciens CN-32]
 gi|166225500|sp|A4Y706|SYT_SHEPC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|145564804|gb|ABP75739.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Shewanella
           putrefaciens CN-32]
          Length = 642

 Score =  672 bits (1733), Expect = 0.0,   Method: Composition-based stats.
 Identities = 291/647 (44%), Positives = 417/647 (64%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS + F    +  DVA  I   LAK  +A  +NG++ D  D +  +  +
Sbjct: 1   MPV---ITLPDGSKREFAHAVSTLDVAADIGPGLAKACIAGRVNGELKDACDLIETDAEL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   + ++RHSCAH++  A++ +WPE ++AIGP+I++GFYYD D E   + D++
Sbjct: 58  SIITAKDEEGVEILRHSCAHLLGHAIKQMWPETKMAIGPVIDNGFYYDIDLEHKLTQDDI 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M ++   +   +K+ +S ++AR+ F ++ E YK+ IL E+I       LY   E
Sbjct: 118 EALEKRMLQLAKTNYDVVKRVVSWQEARDTFAARGEEYKIAILDENISKDATPALYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +    + F KLM +AGAYWRG+S   ML RIYGTAW  ++ L+ +L  L
Sbjct: 178 YTDMCRGPHVPNMRFCQHF-KLMSIAGAYWRGNSENKMLQRIYGTAWADKKALSTHLTRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF  L  ++RRK+ +  Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWSIFLELERFIRRKLNQYTYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+
Sbjct: 297 LMMDRVLWERSGHWDKYSEAMFT------TSSENREYAIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFG  +RNEPSGSLHGLMRVRGFTQDDAH+FCT +Q+  E      ++   Y  
Sbjct: 351 LPLRMAEFGCCHRNEPSGSLHGLMRVRGFTQDDAHIFCTDDQVQEEVSACIQMVYDTYST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFE I+VKLSTRPEKR+G DA+WD AE  +K  L        + I   +L GEGAFYGP
Sbjct: 411 FGFENIVVKLSTRPEKRIGDDAMWDRAEEALKQALRA------NNIEFTLLPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+D+ LPSR  A YV   + +  PVMIHRA+ GS+ERF+GI
Sbjct: 465 KIEFTLHDCLDRAWQCGTVQLDYALPSRLGATYVAEDNSRQTPVMIHRAILGSLERFLGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE + G  P WL+P+Q +V  IT    +Y QEI    K   +    D RNE I +KIRE
Sbjct: 525 LIEEYAGRFPTWLAPMQVVVMNITDKQADYVQEIVKFFKEQGIRASFDLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H+++++P +++ GD+E   + + +R        K+ L D    + ++
Sbjct: 585 HTLRRVPYLLVVGDQEMENKEVAVRTRDGIDLGKMRLEDFATKIHQQ 631


>gi|308049557|ref|YP_003913123.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Ferrimonas
           balearica DSM 9799]
 gi|307631747|gb|ADN76049.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Ferrimonas
           balearica DSM 9799]
          Length = 644

 Score =  672 bits (1733), Expect = 0.0,   Method: Composition-based stats.
 Identities = 299/649 (46%), Positives = 419/649 (64%), Gaps = 21/649 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS + F    +  D+A  I   LAK  +A  +NGK+ D  D +  +  +
Sbjct: 1   MPV---ITLPDGSQRQFDKPVSVMDIANDIGPGLAKACLAGRVNGKLVDACDLIESDADV 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT  D   L  IRHSCAH++  A++ ++PE ++AIGP+I++GFYYD D E   + +++
Sbjct: 58  AIITTRDEEGLEFIRHSCAHLLGHAIKQLFPETKMAIGPVIDNGFYYDIDLEHKLTQEDI 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M E+   +   +K+ +S ++AR+ FE++ E YK+EIL E+I   +   LY   E
Sbjct: 118 DALEKRMLELAKTNYDVIKKVVSWQEARDTFEARGETYKMEILDENISRDDRPGLYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KLM VAGAYWRG+S+  ML RIYGTAW  +++L  YL  L
Sbjct: 178 YVDMCRGPHVPNMRHCHHF-KLMNVAGAYWRGNSDNKMLQRIYGTAWADKKQLKAYLQRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
           EE+ KRDHRK+ + +DLFH  E+  G++FWH  GW I+Q L  +MR+++    YEE+ TP
Sbjct: 237 EEAAKRDHRKIGKALDLFHWQEEAPGMVFWHNDGWTIYQELEGFMRKQLHKYGYEEVRTP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            V+D+ +W++SGHWD Y   +FA      T  + RT+A+KPMNCPGH+ +F  GLKSYR+
Sbjct: 297 LVMDKVMWERSGHWDKYSEMIFA------TESEKRTYAVKPMNCPGHLQIFKQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP R+AEFG V+RNEPSGSLHGLMRVR FTQDDAH+FCT+EQ+ +E      ++   YK 
Sbjct: 351 LPYRMAEFGLVHRNEPSGSLHGLMRVRSFTQDDAHIFCTEEQILDEVTSCIKMVYDTYKT 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFE+I VKLSTRPE+R+GSD LWD AE  +   LD       + +   +  GEGAFYGP
Sbjct: 411 FGFEEIEVKLSTRPEQRIGSDDLWDKAEKSLAEALDA------NGLKYELQPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFN--LPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           K E+ L D + R WQCGTIQ+DF+   P R +  YV   + +  PVMIHRA+ GS+ERFI
Sbjct: 465 KIEFTLHDCLDRAWQCGTIQLDFSMPQPERLDVSYVGEDNSRKVPVMIHRAILGSLERFI 524

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
           GI+IE + G LP WL+P Q  V  IT +  +Y +++  +L    +  + D RNE I +KI
Sbjct: 525 GILIEEYAGKLPTWLAPTQVQVMNITDNQADYVRQVVEMLNDQGIRAKADLRNEKIGFKI 584

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           REH++K++P +++CGD+E     I IR        K+ L      + +E
Sbjct: 585 REHTLKRVPYLLVCGDQEMENGEIAIRTRNGVDLGKMKLEQFAAAVAQE 633


>gi|311069390|ref|YP_003974313.1| threonyl-tRNA synthetase [Bacillus atrophaeus 1942]
 gi|310869907|gb|ADP33382.1| threonyl-tRNA synthetase [Bacillus atrophaeus 1942]
          Length = 643

 Score =  672 bits (1733), Expect = 0.0,   Method: Composition-based stats.
 Identities = 260/653 (39%), Positives = 417/653 (63%), Gaps = 20/653 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M   +K+TFPDG++K F    T  D+A SIS  L KK++A  +NG+  DL  P+  +G++
Sbjct: 1   MSDMVKITFPDGAVKEFAKGTTTEDIAASISPGLKKKSLAGKLNGQEIDLRTPINEDGTV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT      L ++RHS AH++A+A++ I+ +V+  +GP+IE+GFYYD + E+  + ++L
Sbjct: 61  EIITEGSEEGLQIMRHSTAHLLAQAIKRIYKDVKFGVGPVIENGFYYDVEMEEAITPEDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IEK+M++I+  + P +++ +S E+A+  F    +  K+E+L++IP  E V++Y QGE+
Sbjct: 121 PKIEKEMKKIVNANLPIVRKEVSREEAKARFAEIGDDLKLELLDAIPEGETVSIYEQGEF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRG HV STG++K+F KL+ +AGAYWRGDSN  ML R+YGTA+  + +L ++L  LE
Sbjct: 181 FDLCRGVHVPSTGKIKEF-KLLSLAGAYWRGDSNNQMLQRVYGTAFFKKADLEEHLRLLE 239

Query: 240 ESEKRDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTP 297
           E+++RDHRKL +E+ LF +  + G G+  W  KG  I + +  Y+  +++   YE + TP
Sbjct: 240 EAKERDHRKLGKELKLFANSQKVGQGLPLWLPKGATIRRVIERYIVDKELSLGYEHVYTP 299

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +  + L++ SGHW+ Y+  MF     D+      T AL+PMNCP H+ ++ + + SYRE
Sbjct: 300 VLGSKELYETSGHWNHYQDGMFPPIELDN-----ETLALRPMNCPHHMMIYKNDIHSYRE 354

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+ +E ++   LI  +Y+D
Sbjct: 355 LPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKDEFIRTVRLIQDVYED 414

Query: 418 FGFEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           FG      +LS R      K    D +W+ A++++K  +D I +      +     GE A
Sbjct: 415 FGLNDYTFRLSYRDPEDTEKYFDDDEMWNKAQSMLKDAMDEIGS------DYYEAEGEAA 468

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  +K AIG++    T+Q+DF LP RF+  YV    ++  PV+IHR V  ++ER
Sbjct: 469 FYGPKLDVQVKTAIGKEETLSTVQLDFLLPERFDLTYVGEDGKQHRPVVIHRGVVSTMER 528

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETIN 592
           F+  +IE  KG LP WL+P+Q  V  ++ S  ++YA+++   L+   L +E D R+E I 
Sbjct: 529 FVAFLIEEHKGALPTWLAPVQFQVIPVSPSVHLDYAKKVQERLQREGLRVEVDIRDEKIG 588

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           YKIRE  ++KIP +++ GD+EA   ++ +R++G   ++ +SL D +     E+
Sbjct: 589 YKIREAQMQKIPYMLVVGDQEAENGAVNVRKYGEQKSETISLDDFVKKAVAEA 641


>gi|238797380|ref|ZP_04640880.1| Threonyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
 gi|238718811|gb|EEQ10627.1| Threonyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
          Length = 642

 Score =  671 bits (1732), Expect = 0.0,   Method: Composition-based stats.
 Identities = 291/647 (44%), Positives = 430/647 (66%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D SD +  +  +
Sbjct: 1   MPV---ITLPDGSQRHYDHAISALDVALDIGPGLAKACIAGRVNGELVDASDLIESDAQL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L ++RHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D ++  + ++L
Sbjct: 58  AIITTKDAEGLEILRHSCAHLLGHAIKQLWPDTKMAIGPVIDNGFYYDVDIDRTLTQEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M E+  +D   +K+ +S ++AR+ F ++ E YKV IL E+I   +  +LY   E
Sbjct: 118 DLLEKRMHELADKDYDVIKKKVSWQEARDTFAARGEDYKVAILDENISRDDRPSLYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KL K +GAYWRGDS   ML RIYGTAW  +++L  YL  L
Sbjct: 178 YVDMCRGPHVPNMRFCHHF-KLQKTSGAYWRGDSKNKMLQRIYGTAWGDKKQLNAYLQRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF+ L +++R K+K+  Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELETFVRMKLKEYQYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW+++GHW++Y  +MF       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 297 FMMDRVLWEKTGHWENYAEHMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  
Sbjct: 351 LPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQVRDEVNSCIKMVYDMYST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI+VKLSTRPEKR+GSD  W  AE+ +   L      +++ I      GEGAFYGP
Sbjct: 411 FGFEKIVVKLSTRPEKRIGSDEQWTRAESDLAAAL------TENGIPFDYQPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF+LP R +A Y+  ++++  PVMIHRA+ GSIERFIGI
Sbjct: 465 KIEFTLHDCLDRAWQCGTVQLDFSLPGRLSASYIGENNDRQVPVMIHRAILGSIERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E + G  P WL+P+Q +V  IT S  +Y Q++   L+   +  + D RNE I +KIRE
Sbjct: 525 LTEEYAGFFPTWLAPVQVVVMNITDSQSDYVQQVTKKLQDAGIRAKADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H+++++P +++CGDKE     I +R         + +   +  L  E
Sbjct: 585 HTLRRVPYMLVCGDKEVESGKIAVRTRRGKDLGSLDVNVVVDQLLAE 631


>gi|154687027|ref|YP_001422188.1| threonyl-tRNA synthetase [Bacillus amyloliquefaciens FZB42]
 gi|166223321|sp|A7Z7I1|SYT_BACA2 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|154352878|gb|ABS74957.1| ThrS [Bacillus amyloliquefaciens FZB42]
          Length = 643

 Score =  671 bits (1732), Expect = 0.0,   Method: Composition-based stats.
 Identities = 262/653 (40%), Positives = 413/653 (63%), Gaps = 20/653 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M   I +TFPDG++K FP   T  D+A SIS  L KK++A  +NG+  DL  P+  +G++
Sbjct: 1   MSDMINITFPDGAVKEFPKGTTTEDIAASISPGLKKKSLAGKLNGQEIDLRTPIQEDGAV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT      L ++RHS AH++A+A++ I+ +V+  +GP+IE+GFYYD + EQ  + D+L
Sbjct: 61  EIITEGTEEGLNIMRHSTAHLLAQAIKRIYKDVKFGVGPVIENGFYYDVEMEQALTPDDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IEK+M+ I+  + P +++ +S ++A+ +F    +  K+E+L++IP  E V++Y QGE+
Sbjct: 121 PKIEKEMKRIVGENLPIIRKEVSRDEAKAMFAEIGDNLKLELLDAIPEDETVSIYEQGEF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRG HV STG++K+F KL+ +AGAYWRGDS   ML RIYGTA+  + +L ++L  LE
Sbjct: 181 FDLCRGVHVPSTGKIKEF-KLLSLAGAYWRGDSKNQMLQRIYGTAFFKKDDLKEHLRMLE 239

Query: 240 ESEKRDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTP 297
           E+++RDHRKL +E+ LF +  + G G+  W  KG  I + +  Y+  +++   YE + TP
Sbjct: 240 EAKERDHRKLGKELKLFANSQKVGQGLPLWLPKGATIRRVIERYIVDKELSLGYEHVYTP 299

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +  + L++ SGHWD Y+  MF     D+      T  L+PMNCP H+ ++   + SYRE
Sbjct: 300 VLGSKDLYETSGHWDHYQDTMFPPMEMDN-----ETLVLRPMNCPHHMMIYKQDIHSYRE 354

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+  E ++   LI  +Y+D
Sbjct: 355 LPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEEFIRTVRLIQDVYED 414

Query: 418 FGFEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           FG      +LS R      K    D +W+ A++++K  +D + +      +     GE A
Sbjct: 415 FGLNDYTFRLSYRDPEDTEKYFDDDEMWNKAQSMLKAAMDEMGH------DYYEAEGEAA 468

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  +K AIG++    T+Q+DF LP RF+  YV    ++  PV+IHR V  ++ER
Sbjct: 469 FYGPKLDVQVKTAIGKEETLSTVQLDFLLPERFDLTYVGEDGKQHRPVVIHRGVVSTMER 528

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETIN 592
           F+  +IE  KG LP WL+P+Q  V  ++ S  ++YA+++   L+   L +E D R+E I 
Sbjct: 529 FVAFLIEEHKGALPTWLAPVQFQVIPVSPSVHLDYAKKVQERLQREGLRVELDSRDEKIG 588

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           YKIRE  ++KIP +++ GD+EA   ++ +R++G   ++ VSL D +     E+
Sbjct: 589 YKIREAQMQKIPYMLVVGDQEAENGAVNVRKYGEQKSETVSLDDFVKKAVAEA 641


>gi|77463957|ref|YP_353461.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Rhodobacter
           sphaeroides 2.4.1]
 gi|123757748|sp|Q3J0X4|SYT_RHOS4 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|77388375|gb|ABA79560.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Rhodobacter
           sphaeroides 2.4.1]
          Length = 646

 Score =  671 bits (1732), Expect = 0.0,   Method: Composition-based stats.
 Identities = 321/650 (49%), Positives = 438/650 (67%), Gaps = 10/650 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           + I LTFPDG  + FP   T ++VA SIS SL KKA++ +++G+  DL  P+  +  I I
Sbjct: 2   AQISLTFPDGKAREFPAGITPAEVAASISTSLGKKAISASVDGRHYDLQWPIETDAKIAI 61

Query: 62  ITPEDP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            T  D  ++L +IRH  AHIMA AVQ +WP+V+V IGP++ +G+YYDFD+E+ F+ ++L 
Sbjct: 62  HTMADEAQALELIRHDLAHIMARAVQELWPDVKVTIGPVVANGWYYDFDREETFTPEDLG 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEK+M+EII        +     +A   +E + E +KVE++++IP  +++ +Y  G W 
Sbjct: 122 AIEKRMKEIINAREAVKTELWERARAIAYYEERGEPFKVELVQAIPEDQSIRMYWHGGWQ 181

Query: 181 DLCRGPHVRSTGQ-VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           DLCRGPH++ TGQ     FKLM VAGAYWRGDS    L RIYG A+ T+ EL  YL+ LE
Sbjct: 182 DLCRGPHLQHTGQVPADAFKLMSVAGAYWRGDSANKQLQRIYGVAFKTRDELKAYLHMLE 241

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQ 298
           E+ KRDHRKL REM+LFH+ E+  G++FWH  GW+I++TL  YMR R  +  Y+EI TPQ
Sbjct: 242 EAAKRDHRKLGREMELFHLQEEAPGMVFWHPNGWQIYRTLEDYMRGRLRQAGYKEIRTPQ 301

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW+ SGHW++Y+ NMF V+  ++  K+ R  ALKPMNCP HV V+N GLKSYR+L
Sbjct: 302 VVDRKLWEASGHWEAYKENMFIVEVEEEHAKEKRINALKPMNCPCHVQVYNQGLKSYRDL 361

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFGS +R E SGS+HGLMRVRGF QDDAH+FCT++Q+ +EC     L+ S+YKD 
Sbjct: 362 PLRLAEFGSCHRYESSGSMHGLMRVRGFVQDDAHIFCTEDQIESECAAFIELLSSVYKDL 421

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+   +KLSTRPE R+GSD  WD  E  ++  +  +  +        +  GEGAFYGPK
Sbjct: 422 GFDSFEIKLSTRPEVRIGSDEAWDKVETALENAIRKVGAA------YEIDPGEGAFYGPK 475

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++ L DAIGR WQCGT QVD NLP+R  A Y+     K  P M+HRA+ GS ERFIGI+
Sbjct: 476 LDFKLTDAIGRKWQCGTFQVDPNLPTRLGAEYIGEDGAKHRPYMLHRAILGSFERFIGIL 535

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IEN+ G LP WL+P Q +V +I S A  Y  E+   L++  +  E D RNE INYK+REH
Sbjct: 536 IENYAGKLPFWLAPRQVVVASIVSDADPYVAEVVAALRARGVRAEADTRNEKINYKVREH 595

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
           S+ K+P+I+  G +E   RS+ +RR G T T+ + L   +  L  ++  P
Sbjct: 596 SVGKVPVILAIGMQEVEARSVSVRRLGETRTESMGLDQVVDQLAADARIP 645


>gi|146276901|ref|YP_001167060.1| threonyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17025]
 gi|166225490|sp|A4WQU1|SYT_RHOS5 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|145555142|gb|ABP69755.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Rhodobacter
           sphaeroides ATCC 17025]
          Length = 646

 Score =  671 bits (1732), Expect = 0.0,   Method: Composition-based stats.
 Identities = 321/650 (49%), Positives = 440/650 (67%), Gaps = 10/650 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           + I LTFPDG+ + FP   T ++VA SIS SL KKA++ +++G+  DL  P+  +  I I
Sbjct: 2   AQISLTFPDGNAREFPAGITPAEVAASISTSLGKKAISASVDGRHYDLQWPIEADAKIAI 61

Query: 62  ITPEDP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            T  D  ++L +IRH  AHIMA AVQ +WP+V+V IGP++ +G+YYDFD+E+ F+ ++L 
Sbjct: 62  HTMADEAQALELIRHDLAHIMARAVQELWPDVKVTIGPVVANGWYYDFDREETFTPEDLG 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEK+M+EII        +    ++A   +E++ E +KVE++++IPA + + +Y  G W 
Sbjct: 122 AIEKRMKEIINARDAVRTETWDRDRAIAHYEARGENFKVELVQAIPADQQIRMYWHGNWQ 181

Query: 181 DLCRGPHVRSTGQ-VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           DLCRGPH++ TGQ     F+LM VAGAYWRGDSN   L RIYG A+ T+ EL  YL+ LE
Sbjct: 182 DLCRGPHLQHTGQVPADAFQLMSVAGAYWRGDSNNKQLQRIYGVAFKTRDELKAYLHMLE 241

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQ 298
           E+ KRDHRKL +EM+LFH+ E+  G++FWH  GW+I++TL  YMR R  K  Y+EI TPQ
Sbjct: 242 EAAKRDHRKLGKEMELFHLQEEAPGMVFWHPNGWQIYRTLEDYMRGRLRKAGYKEIRTPQ 301

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW+ SGHW++Y+ NMF V+  ++  K+ R  ALKPMNCP HV V+N GLKSYR+L
Sbjct: 302 VVDRKLWEASGHWEAYKENMFLVEVEEEHAKEKRINALKPMNCPCHVQVYNQGLKSYRDL 361

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFGS +R E SGS+HGLMRVRGF QDDAH+FCT++Q+  EC     L+ S+YKD 
Sbjct: 362 PLRLAEFGSCHRYESSGSMHGLMRVRGFVQDDAHIFCTEDQIEGECAAFIELLSSVYKDL 421

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+   +KLSTRPE R+GSD  WD  E  ++  +  +  +        +  GEGAFYGPK
Sbjct: 422 GFDSFEIKLSTRPEVRIGSDEAWDKVETALENAIKKVGAA------YEIDPGEGAFYGPK 475

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++ L DAIGR WQCGT QVD NLP+R  A Y+     K  P M+HRA+ GS ERFIGI+
Sbjct: 476 LDFKLTDAIGRKWQCGTFQVDPNLPTRLGAEYIGEDGAKHRPYMLHRAILGSFERFIGIL 535

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IEN+ G LP WL+P Q +V +I S A  Y  E+   L++  +  E D RNE INYK+REH
Sbjct: 536 IENYAGKLPFWLAPRQVVVASIVSDADPYVAEVVAALRARGVRAEADTRNEKINYKVREH 595

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
           S+ K+P+I+  G +E   R++ +RR G T T+   L   +  L  ++  P
Sbjct: 596 SVGKVPVILAIGMQEVEGRTVSVRRLGETGTESAPLDQVVERLATDARIP 645


>gi|325919878|ref|ZP_08181868.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Xanthomonas
           gardneri ATCC 19865]
 gi|325549662|gb|EGD20526.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Xanthomonas
           gardneri ATCC 19865]
          Length = 634

 Score =  671 bits (1732), Expect = 0.0,   Method: Composition-based stats.
 Identities = 291/644 (45%), Positives = 421/644 (65%), Gaps = 16/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +T PDGS + F    +   VA+SI   LAK  +A  ++G++ D SD +  + S+ II
Sbjct: 1   MINITLPDGSRREFESPVSVMQVAQSIGAGLAKATIAGQVDGQLVDASDVIDHDASLRII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   + +IRHSCAH++  AV+ ++PEV++ IGP+I +GFYYD   E+PF+ D++A I
Sbjct: 61  TAKDAEGVEIIRHSCAHLVGHAVKQLYPEVKMVIGPVIAEGFYYDIYSERPFTPDDMAAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-ENVTLYRQGEWFD 181
           E++MQE+IA+D   +K+     +  ELF  + E YK+ ++E + A    + LY   E+ D
Sbjct: 121 EQRMQELIAQDYEVIKKVTPRAEVIELFAQRGEEYKLRLIEDMSADITAMGLYYHQEYVD 180

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           +CRGPHV +T  +K F KL +++GAYWRGD+    L RIYGTAW  +++L  Y+  +EE+
Sbjct: 181 MCRGPHVPNTRFLKAF-KLTRISGAYWRGDAKNEQLQRIYGTAWADKKQLDAYILRMEEA 239

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
           +KRDHR++ ++ DLFH+ E+  G++FWH KGW ++Q +  YMR+  +D  Y E+  PQ+L
Sbjct: 240 DKRDHRRIGKQQDLFHLQEEAPGLVFWHPKGWSLWQVVEQYMRKVYRDSGYGEVRCPQIL 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D  LWQ+SGHWD+Y+  MF       T  + RT+A+KPMNCPGHV VFN GL SYR+LP+
Sbjct: 300 DVSLWQKSGHWDNYQDAMFF------TESEKRTYAVKPMNCPGHVQVFNQGLHSYRDLPI 353

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R  EFG+ +RNEPSG+LHG++RVRGFTQDD HVFC + Q+  E    H   +++Y  FGF
Sbjct: 354 RYGEFGACHRNEPSGALHGILRVRGFTQDDGHVFCLESQIEAEVTAFHQQALAVYTAFGF 413

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           + I +K++ RPEKR+G D  WD AE  ++  L          +    L GEGAFYGPK E
Sbjct: 414 DDIEIKIALRPEKRLGDDVTWDKAEAALRSAL------GVCGVEWQELPGEGAFYGPKIE 467

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           Y LKDAIGR WQ GT+QVDF +P R  A YV+ HS+K HPVM+HRA+ GS+ERFIGI+IE
Sbjct: 468 YHLKDAIGRTWQLGTMQVDFMMPGRLGAEYVDEHSQKKHPVMLHRAIVGSMERFIGILIE 527

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +  G  P WL+P+Q +V  IT +  +Y   +   L +    +  D RNE I YKIREH++
Sbjct: 528 HHAGAFPSWLAPVQVVVANITDAQADYVDSVRKTLANQGFRVNADLRNEKIGYKIREHTL 587

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +++P +++ GD+E    ++ +R         +++   +  L  E
Sbjct: 588 QRVPYLLVVGDREKENGAVAVRTRSGEDLGTMTVSAFVERLQAE 631


>gi|254522893|ref|ZP_05134948.1| threonyl-tRNA synthetase [Stenotrophomonas sp. SKA14]
 gi|219720484|gb|EED39009.1| threonyl-tRNA synthetase [Stenotrophomonas sp. SKA14]
          Length = 633

 Score =  671 bits (1732), Expect = 0.0,   Method: Composition-based stats.
 Identities = 293/644 (45%), Positives = 425/644 (65%), Gaps = 16/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +T PDGS + F    +  DVA+SI   LAK  +A A++G + D SD +  + S+ II
Sbjct: 1   MINITLPDGSRREFENPVSVMDVAQSIGAGLAKATIAGAVDGVLVDASDVIDHDASLRII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   + +IRHSCAH++  AV+ ++P+V++ IGP+I +GFYYD   E+PF+ +++A I
Sbjct: 61  TAKDEEGVEIIRHSCAHLVGHAVKQLYPDVKMVIGPVIAEGFYYDIYSERPFTPEDMAAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-ENVTLYRQGEWFD 181
           EK+M E+IA+D   +K+     +  E+F+++ E YK+ ++E +    + + +Y   E+ D
Sbjct: 121 EKRMGELIAQDYDVIKKMTPRAEVVEIFKARGEDYKLRLIEDMSDDIQAMGMYYHQEYVD 180

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           +CRGPHV +T  +K F KL +++GAYWRGD+    L RIYGTAW  +++L  Y+  +EE+
Sbjct: 181 MCRGPHVPNTRFLKAF-KLTRISGAYWRGDAQNEQLQRIYGTAWADKKQLEAYIKRIEEA 239

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
           E RDHR++ ++ DLFH+ E+  G++FWH KGW ++Q +  YMR+  +   Y E+  PQ+L
Sbjct: 240 EMRDHRRIGKQQDLFHLQEEAPGLVFWHPKGWALWQVVEQYMRKVYRKTGYGEVRCPQIL 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D  LWQ+SGHWD+Y+  MF       T  + RT+ALKPMNCPGHV VFN GL SYR+LP+
Sbjct: 300 DVSLWQKSGHWDNYQDAMFF------TESEKRTYALKPMNCPGHVQVFNQGLHSYRDLPI 353

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R  EFG+ +RNEPSG+LHG++RVRGFTQDD HVFCT+ Q+  E    H   +++Y+ FGF
Sbjct: 354 RYGEFGACHRNEPSGALHGILRVRGFTQDDGHVFCTENQVEAEVTAFHQQALAVYQHFGF 413

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           ++I VK++ RPE R+G DA WD AE  ++  L      S + +    L GEGAFYGPK E
Sbjct: 414 DEIQVKIALRPESRLGDDATWDKAEGALRSAL------SSNGVEWQELPGEGAFYGPKIE 467

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           Y LKDAIGR WQ GT+QVDF +P R  A YV+ +S+K HPVM+HRA+ GS+ERF+GI+IE
Sbjct: 468 YHLKDAIGRTWQLGTMQVDFMMPGRLGAEYVDENSQKKHPVMLHRAIVGSMERFLGILIE 527

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +  G  P WL+P Q +V  IT +  EY   +   L      + +D RNE I YKIREH++
Sbjct: 528 HHAGQFPAWLAPTQVVVANITDAQAEYVSGVTKTLAEQGFRVSSDLRNEKIGYKIREHTL 587

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +++P +++ GD+E    ++ +R         +SL   I  L  E
Sbjct: 588 QRVPYLLVIGDREKENGAVAVRTRSGEDLGSMSLQAFIERLHAE 631


>gi|39996615|ref|NP_952566.1| threonyl-tRNA synthetase [Geobacter sulfurreducens PCA]
 gi|73919793|sp|Q74D04|SYT_GEOSL RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|39983496|gb|AAR34889.1| threonyl-tRNA synthetase [Geobacter sulfurreducens PCA]
          Length = 636

 Score =  671 bits (1732), Expect = 0.0,   Method: Composition-based stats.
 Identities = 286/644 (44%), Positives = 418/644 (64%), Gaps = 18/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEII 62
           DI++T PDGS +     AT  D+A SI   LAK A+A  I+G   D++ P+ +G+ +EII
Sbjct: 3   DIRVTLPDGSERILAEGATVRDLAASIGAGLAKAAIAGKIDGVQVDVTAPLTDGARVEII 62

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +    L +IRHS +H+MA+AV+ ++P  +V IGP +E GFYYDFD E PFS ++LA+I
Sbjct: 63  TDKSADGLDIIRHSTSHLMAQAVKQLFPTAKVTIGPAVETGFYYDFDVETPFSPEDLARI 122

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E++M+E+   D P  +Q LS ++A +LF    E YKVEI+E++P  E+V+LYRQG++ DL
Sbjct: 123 EERMRELAKADIPVERQVLSRDEAVKLFRDMGEEYKVEIIEALPE-ESVSLYRQGDFVDL 181

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ ST   + F KL  +AGAYWRGD    ML R+YGTA+  ++EL  YL  +EE++
Sbjct: 182 CRGPHLPSTSFCRAF-KLTSLAGAYWRGDEKNKMLQRVYGTAFADKKELDAYLEKIEEAK 240

Query: 243 KRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVL 300
           +RDHRKL RE+DLF  ++D   G + WH KG  +   L  + RR+ +K  Y+ +  PQ+L
Sbjct: 241 RRDHRKLGRELDLFSFSDDVGAGFVIWHPKGAMLRTLLEDFERREHLKRGYDIVVGPQIL 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
              LWQ+SGH+D+YR NM+  +       + + F +KPMNC  H+ ++   L+SYR+LP+
Sbjct: 301 KTELWQRSGHYDNYRENMYFTEV------EGQGFGIKPMNCLSHMMIYKSQLRSYRDLPL 354

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R  E G+V+R+E +G LHGL+RVR FTQDDAH+ CT EQ+  E   + + +  +   FGF
Sbjct: 355 RFFELGTVHRHERAGVLHGLLRVRCFTQDDAHILCTPEQLDAEIKGVISFVNDVMGIFGF 414

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           +  M +LSTRPEK +GSD  W+ A   + G L              +  G+GAFYGPK +
Sbjct: 415 DYEM-ELSTRPEKSIGSDEDWERATGALLGALKDSGRP------YEINEGDGAFYGPKID 467

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
             L+D++ R WQC TIQ DF LP RF+  YV++  E+  PVM+HR + GSIERFIG++IE
Sbjct: 468 IKLRDSLDRKWQCATIQCDFTLPERFDLTYVDADGERKRPVMVHRVILGSIERFIGVLIE 527

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +F GN PLWLSP+QAIV T+T +   YA ++   L+++ + ++ DFRNE + +KIRE  +
Sbjct: 528 HFAGNFPLWLSPVQAIVLTVTDNQQPYAAQVFETLRTNGVRVQKDFRNEKLGFKIREAQL 587

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +KIP +++ GDKE    ++  R    +    +   + +  +  E
Sbjct: 588 QKIPYMLVIGDKEVESGTVTPRFRDGSNLAAMKPEEFVAFVNDE 631


>gi|37526560|ref|NP_929904.1| threonyl-tRNA synthetase [Photorhabdus luminescens subsp. laumondii
           TTO1]
 gi|73919813|sp|Q7N3P6|SYT_PHOLL RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|36785991|emb|CAE15043.1| threonyl-tRNA synthetase (threonine--tRNA ligase) [Photorhabdus
           luminescens subsp. laumondii TTO1]
          Length = 642

 Score =  671 bits (1732), Expect = 0.0,   Method: Composition-based stats.
 Identities = 289/647 (44%), Positives = 426/647 (65%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP    +T PDGS + F    +  DVA  I   LAK  +A  +NG++ D  + +  + ++
Sbjct: 1   MPV---VTLPDGSQRQFDHAVSVMDVACDIGPGLAKACIAGRVNGELVDACELIDSDANL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L +IRHSCAH++  A++ +WP+ ++AIGPII++GFYYD D  +  + +++
Sbjct: 58  AIITSKDDAGLEIIRHSCAHLLGHAIKQLWPDTKMAIGPIIDNGFYYDVDLGRALTQEDI 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M E+  +D   +K+ ++ ++AR+ F ++ E YKV+IL E+I   +   LY   E
Sbjct: 118 ELLEKRMLELAKKDYDVIKKKVNWQEARDTFVARGEDYKVQILDENISRDDRPGLYNHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KL KVAGAYWRGDSN  ML RIYGTAW  +++L  YL  L
Sbjct: 178 YIDMCRGPHVPNMRFCHHF-KLQKVAGAYWRGDSNNKMLQRIYGTAWADKKQLNTYLQRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G+ FWH  GW IF+ L +++R K+K+  Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMAFWHNDGWTIFRELETFVRTKLKEYQYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ +W+++GHW++Y  +MF       T  + R + +KPMNCPGH+ +FN GLKSYR+
Sbjct: 297 FMMDRVMWERTGHWENYGEHMFT------TSSENREYCVKPMNCPGHIQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT+EQ+  E      ++  +Y  
Sbjct: 351 LPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQIHREVSSCIKMVYDVYST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI+VKLSTRPEKR+G++  W+ AE  +   L       ++ +      GEGAFYGP
Sbjct: 411 FGFEKIVVKLSTRPEKRIGTEEQWNQAEESLAAALQ------ENGVQFEYQPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF+LP R +A YV  ++E+  PVMIHRAV GS+ERFIGI
Sbjct: 465 KIEFTLHDCLDRAWQCGTVQLDFSLPGRLSASYVGENNERKVPVMIHRAVLGSLERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E + G  P W++P Q +V  IT S  +Y QE+   L+   +  + D RNE I +KIRE
Sbjct: 525 LTEEYAGFFPTWIAPQQVVVMNITDSQADYVQELVKKLQDAGIRAKADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H+++++P +++CG+KE     + +R         + +   I  L  E
Sbjct: 585 HTLRRVPYMLVCGEKEVESGKVSVRTRRGKDLGSIDVNGFIEKLLIE 631


>gi|260914069|ref|ZP_05920542.1| threonine-tRNA ligase [Pasteurella dagmatis ATCC 43325]
 gi|260631702|gb|EEX49880.1| threonine-tRNA ligase [Pasteurella dagmatis ATCC 43325]
          Length = 644

 Score =  671 bits (1731), Expect = 0.0,   Method: Composition-based stats.
 Identities = 298/648 (45%), Positives = 431/648 (66%), Gaps = 16/648 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS + F    +  DVA SI   LAK  +A  +NG+  D  D +  + S+EIIT +
Sbjct: 4   ITLPDGSQRQFEQPVSVMDVAASIGAGLAKACIAGRVNGERKDACDVITNDSSLEIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ ++P V++AIGP IE+GFYYD D ++  + ++L  +EK+
Sbjct: 64  DEDGLEIIRHSCAHLLGHAIKQLFPNVKMAIGPTIENGFYYDVDLDRSLTQEDLDALEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M ++   +   +K+ +S ++AR+ FE + E YK+ IL E+I   +   LY   E+ D+CR
Sbjct: 124 MLDLAKTNYDVVKKVVSWQEARDTFEQRSEPYKMAILDENIARCDTPALYHHEEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +      F KLMKVAGAYWRGDS   ML RIYGTAW  +++L++YL  LEE+ KR
Sbjct: 184 GPHVPNMRFCHHF-KLMKVAGAYWRGDSKNKMLQRIYGTAWADKKQLSEYLTRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ + +DL+H+ E+  G++FWH  GW IF+ L +++R K+K+ DY+E+  P ++D+ 
Sbjct: 243 DHRKIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW +Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWQNYGDLMFT------TQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+ +E      ++  IY  FGFE I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQIESEVTSCIKMVYDIYSTFGFENI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPEKR+G+D +W+      +         + + +   +  GEGAFYGPK E+ L
Sbjct: 417 QVKLSTRPEKRIGADEMWE------RAEAGLAAALAHNGLEYEIQEGEGAFYGPKIEFAL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D++ R+WQCGTIQ+DF LP R NA YV   +++  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 RDSLDREWQCGTIQLDFALPGRLNASYVAEDNDRRTPVMIHRAILGSIERFIGIITEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P QA+V  IT S  EY Q++   L    L +++D RNE I +KIREH+++++
Sbjct: 531 GFFPAWLAPTQAVVMNITDSQSEYVQKVVKTLSDAGLRVKSDLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           P +++CGDKE     + +R          ++ + + IL K+    + +
Sbjct: 591 PYMLVCGDKEIEAGKVAVRTRKGADLGTFTIEEFLDILKKQVRLRELK 638


>gi|196043419|ref|ZP_03110657.1| threonyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|196025728|gb|EDX64397.1| threonyl-tRNA synthetase [Bacillus cereus 03BB108]
          Length = 639

 Score =  671 bits (1731), Expect = 0.0,   Method: Composition-based stats.
 Identities = 279/644 (43%), Positives = 431/644 (66%), Gaps = 17/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEII 62
            I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N ++ DL   + E   +EII
Sbjct: 5   MIEIKFPDGSVKEFVKGITLEEIAGSISSSLKKKAVAGKVNDELYDLRRNIEENAEVEII 64

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +    + + RHS AHI+A+AV+ ++ ++ + +GP+IE+GFYYD D     + ++L +I
Sbjct: 65  TIDSNEGVEIARHSAAHILAQAVKRLYGDINLGVGPVIENGFYYDMDFPSSVNVEDLRKI 124

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M++II  +    +  +S E+A +LF+   +  K+E+LE+IP+ E+VTLY+QGE+ DL
Sbjct: 125 EKEMKKIINENIKIERVEVSREEAAKLFQEMNDRLKLELLEAIPSGESVTLYKQGEFVDL 184

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ STG +K F     V+GAYWRGDSN  +L RIYG A+++Q+EL +YL+F+EE+ 
Sbjct: 185 CRGPHLPSTGYLKAFQLTH-VSGAYWRGDSNNQVLQRIYGVAFSSQKELEEYLHFVEEAA 243

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KR+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R  + + +Y+E+ TP +++
Sbjct: 244 KRNHRKLGNELELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMN 303

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           Q +W++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R
Sbjct: 304 QEVWERSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIR 357

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           + EFG V+R+E SG+L+GL+RVR F QDDAH+F T EQ+ +E   +   I  +YK FGFE
Sbjct: 358 MCEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPEQIEDEIKSVMAQIDYVYKTFGFE 417

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPE  +G D LW+ AE  ++ VL ++           +  G+GAFYGPK ++
Sbjct: 418 Y-EVELSTRPEDSMGDDKLWEQAEASLENVLQSLNY------KYRLNEGDGAFYGPKIDF 470

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+ R  QCGTIQ+DF +P +F+  Y++  +EK  PV+IHRAV GS++RF+ I+IE+
Sbjct: 471 HIKDALNRSHQCGTIQLDFQMPEKFDLNYIDEKNEKKRPVVIHRAVLGSLDRFLAILIEH 530

Query: 542 FKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           F G  P W++P+Q  V  ++++  V+YA E+A+ L    + +E D R+E + YKIRE  +
Sbjct: 531 FGGAFPAWVAPVQVKVIPVSNAVHVQYADEVADKLAQAGVRVERDMRDEKLGYKIREAQM 590

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +K+P I++ GDKE    ++ +R++G   +  + L   +  +  E
Sbjct: 591 QKVPYILVIGDKEMENGAVNVRKYGEEKSDVIELDMFVESIKVE 634


>gi|120598808|ref|YP_963382.1| threonyl-tRNA synthetase [Shewanella sp. W3-18-1]
 gi|166225502|sp|A1RJI3|SYT_SHESW RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|120558901|gb|ABM24828.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Shewanella sp.
           W3-18-1]
          Length = 642

 Score =  671 bits (1731), Expect = 0.0,   Method: Composition-based stats.
 Identities = 290/647 (44%), Positives = 417/647 (64%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS + F    +  DVA  I   LAK  +A  +NG++ D  D +  +  +
Sbjct: 1   MPV---ITLPDGSKREFAHAVSTLDVAADIGPGLAKACIAGRVNGELKDACDLIETDAEL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   + ++RHSCAH++  A++ +WPE ++AIGP+I++GFYYD D E   + D++
Sbjct: 58  SIITAKDEEGVEILRHSCAHLLGHAIKQMWPETKMAIGPVIDNGFYYDIDLEHKLTQDDI 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M ++   +   +K+ +S ++AR+ F ++ E YK+ IL E+I       LY   E
Sbjct: 118 EALEKRMLQLAKTNYDVVKRVVSWQEARDTFAARGEEYKIAILDENISKDATPALYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +    + F KLM +AGAYWRG+S   ML RIYGTAW  ++ L+ +L  L
Sbjct: 178 YTDMCRGPHVPNMRFCQHF-KLMSIAGAYWRGNSENKMLQRIYGTAWADKKALSTHLTRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF  L  ++RRK+ +  Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWSIFLELERFIRRKLNQYTYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+
Sbjct: 297 LMMDRVLWERSGHWDKYSEAMFT------TSSENREYAIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFG  +RNEPSGSLHGLMRVRGFTQDDAH+FCT +Q+  E      ++   Y  
Sbjct: 351 LPLRMAEFGCCHRNEPSGSLHGLMRVRGFTQDDAHIFCTDDQVQEEVSACIQMVYDTYST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFE I+VKLSTRPEKR+G DA+WD AE  +K  L        + I   +L GEGAFYGP
Sbjct: 411 FGFENIVVKLSTRPEKRIGDDAMWDRAEEALKQALRA------NNIEFTLLPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+D+ LP+R  A YV   + +  PVMIHRA+ GS+ERF+GI
Sbjct: 465 KIEFTLHDCLDRAWQCGTVQLDYALPNRLGATYVAEDNSRQTPVMIHRAILGSLERFLGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE + G  P WL+P+Q +V  IT    +Y QEI    K   +    D RNE I +KIRE
Sbjct: 525 LIEEYAGRFPTWLAPMQVVVMNITDKQADYVQEIVKFFKEQGIRASFDLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H+++++P +++ GD+E   + + +R        K+ L D    + ++
Sbjct: 585 HTLRRVPYLLVVGDQEMENKEVAVRTRDGIDLGKMRLEDFATKIHQQ 631


>gi|149182849|ref|ZP_01861310.1| threonyl-tRNA synthetase [Bacillus sp. SG-1]
 gi|148849464|gb|EDL63653.1| threonyl-tRNA synthetase [Bacillus sp. SG-1]
          Length = 643

 Score =  671 bits (1731), Expect = 0.0,   Method: Composition-based stats.
 Identities = 259/652 (39%), Positives = 419/652 (64%), Gaps = 20/652 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M   +K+TFPDG++K FP   T  ++A SIS  L KKA+A  +NG + DL  P+  +G+I
Sbjct: 1   MSEALKITFPDGNVKEFPQGTTTEEIASSISPGLKKKALAGKVNGNLIDLKTPITEDGAI 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EI+TP+   +L V+RHS AH+MA+A++ ++P+V++ IGP+I+ GFYYD D E   + ++L
Sbjct: 61  EIVTPDHEDALEVLRHSTAHLMAQAIKRLYPDVKLGIGPVIDGGFYYDIDTEHSITPEDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IEK+M++I   +   +++ +S ++A++++E   + YK+E+LE+IP  E V++Y QG++
Sbjct: 121 PKIEKEMKKIAESNLEVIRKEVSRDEAQKMYEEVSDEYKIELLEAIPEGEQVSIYEQGDF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRG HV STG++K+F KL+ +AGAYWRG+S+  ML RIYGTA+  +++L ++L  LE
Sbjct: 181 FDLCRGIHVPSTGKIKEF-KLLSIAGAYWRGNSDNKMLQRIYGTAFFKKEDLKEHLRLLE 239

Query: 240 ESEKRDHRKLAREMDLFH-IAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTP 297
           E+++RDHRK+ +E++LF    + G G+  W  KG  I + +  Y+  ++ K  Y+ + TP
Sbjct: 240 EAKERDHRKIGKELNLFMNSQKVGQGLPMWLPKGATIRRIIERYIVDKEEKLGYDHVYTP 299

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    L++ SGHWD Y+ NMF V   D+         L+PMNCP H+ ++ + + SYRE
Sbjct: 300 VMGSVDLYKTSGHWDHYQENMFPVMDMDN-----EQLVLRPMNCPHHMMIYKNSIHSYRE 354

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+  E  ++  L++ +YKD
Sbjct: 355 LPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHLFVRPDQIKEEFKRVVRLVLEVYKD 414

Query: 418 FGFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           F       +LS R  +        D +W+ A+ ++K  +D ++      I+     GE A
Sbjct: 415 FDLNDYSFRLSYRDPQDTEKYFDDDEMWNKAQQMLKEAMDEME------IDYFEAEGEAA 468

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  +K A+G++    T+Q+DF LP RF+  Y+    +   PV+IHR V  ++ER
Sbjct: 469 FYGPKLDVQVKTALGKEETLSTVQLDFLLPERFDLTYIGEDGKHHRPVVIHRGVVSTMER 528

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETIN 592
           F+  +IE +KG  P WL+P+Q  V  ++     +YA+++   L++  L +E D R+E I 
Sbjct: 529 FVAFLIEEYKGAFPTWLAPVQVQVIPVSPDVHFDYAKKVQEELQAQGLRVELDSRDEKIG 588

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           YKIRE  + KIP +++ GD E  E ++ +R++G   ++ VSL D +  +T E
Sbjct: 589 YKIREAQMSKIPYMLVVGDNEIQEEAVNVRKYGEQKSETVSLSDFVQKVTDE 640


>gi|229591579|ref|YP_002873698.1| threonyl-tRNA synthetase [Pseudomonas fluorescens SBW25]
 gi|259516637|sp|C3JZN7|SYT_PSEFS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|229363445|emb|CAY50645.1| putative threonyl-tRNA synthetase [Pseudomonas fluorescens SBW25]
          Length = 640

 Score =  671 bits (1731), Expect = 0.0,   Method: Composition-based stats.
 Identities = 294/645 (45%), Positives = 429/645 (66%), Gaps = 18/645 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP    +T PDGS ++F    + ++VA SI   LAK  VA  ++GK+ D SD +  + S+
Sbjct: 1   MP---TITLPDGSQRSFDHSVSVAEVAASIGAGLAKATVAGKVDGKLVDASDLITNDASL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           +IITP+D   L +IRHSCAH++  AV+ ++P  ++ IGP+I++GFYYD   E+PF+ D++
Sbjct: 58  QIITPKDQEGLEIIRHSCAHLIGHAVKQLYPTAKMVIGPVIDEGFYYDIAYERPFTPDDM 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A IE++M  +I +D   +K+     +  ++F ++ E YK+ ++E +P ++ + LY   E+
Sbjct: 118 AAIEQRMHALIEKDYDVIKKVTPRAEVIDVFTARGEDYKLRLVEDMPDEQAMGLYYHEEY 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            D+CRGPHV +T  +K F KL K++GAYWRGD+    L RIYGTAW  +++L  Y+  +E
Sbjct: 178 VDMCRGPHVPNTRFLKSF-KLTKLSGAYWRGDAKNEQLQRIYGTAWADKKQLAAYIQRIE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+EKRDHRK+ + ++LFH+ E+  G++FWH  GW ++Q L  YMR+ + ++ Y EI TPQ
Sbjct: 237 EAEKRDHRKIGKRLNLFHLQEEAPGMVFWHPNGWTLYQVLEQYMRKVQRENGYLEIKTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHW +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYREL
Sbjct: 297 VVDRSLWEKSGHWANYADNMFT------TQSENRDYAIKPMNCPCHVQVFNQGLKSYREL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFG+ +RNEPSG+LHG+MRVRGFTQDDAH+FCT+EQM  E      L + +Y+DF
Sbjct: 351 PMRLAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEEQMQAESAAFIKLTMDVYRDF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF ++ +KLSTRPEKRVGSD LWD      +             +   +  GEGAFYGPK
Sbjct: 411 GFTEVEMKLSTRPEKRVGSDELWD------RAEAALAAALDSAGLAYDLQPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD +GR WQCGT+Q+DFNLP R  A YV+  + + HPVM+HRA+ GS ERF+GI+
Sbjct: 465 IEFSLKDCLGRVWQCGTLQLDFNLPIRLGAEYVSEDNSRKHPVMLHRAILGSFERFVGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+++G  P WL+P QA++  IT    ++A E+   L       ++D RNE I +KIREH
Sbjct: 525 IEHYEGAFPAWLAPTQAVIMNITDKQADFAAEVEKTLNESGFRAKSDLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           ++ K+P +++ GD+E   +++ +R         + +      L +
Sbjct: 585 TLLKVPYLLVIGDREVEMQTVAVRTREGADLGSMPVAQFAEFLAQ 629


>gi|228994292|ref|ZP_04154183.1| Threonyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
 gi|228765442|gb|EEM14105.1| Threonyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
          Length = 641

 Score =  671 bits (1731), Expect = 0.0,   Method: Composition-based stats.
 Identities = 284/644 (44%), Positives = 428/644 (66%), Gaps = 17/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            I + FPDGS K++    T  ++A SIS SL KKAVA  +N ++ DL   +  +  I+II
Sbjct: 5   MINIIFPDGSAKDYVKGITLEEIAASISSSLKKKAVAGKVNDQLFDLRRNIEQDAKIQII 64

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +    + V RH+ AHI+A+AV+ I+ +V++ +GP+IE+GFYYD D       ++L ++
Sbjct: 65  TMDSEEGIEVARHTSAHILAQAVKRIYGDVKLGVGPVIENGFYYDMDLPSSIGVEDLPKL 124

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M+ I+  +    +  ++ ++A +LF+   +  K+E+LE+IP  E VT+Y+QGE+ DL
Sbjct: 125 EKEMKNIVNENLKIERVEITRKEAEKLFKDVNDHLKLELLEAIPENEIVTIYKQGEFVDL 184

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ STG +K F     V+GAYWRGDSN  +L RIYG A+++Q+EL  YL+F+EE+ 
Sbjct: 185 CRGPHLPSTGYLKAFQLTH-VSGAYWRGDSNNQVLQRIYGVAFSSQKELESYLHFVEEAA 243

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KR+HRKL  E++LF  +E+  G+ F+  KG  +   L S++R  +   DY+E+ TP +++
Sbjct: 244 KRNHRKLGNELELFMFSEEAPGMPFYLPKGQIVRNELESFLREIQQNYDYQEVRTPIMMN 303

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           Q LW++SGHWD Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYR+LP+R
Sbjct: 304 QGLWEESGHWDHYKDNMYFSEV------DNKSFALKPMNCPGHMLIFKNKLHSYRDLPIR 357

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           + EFG V+R+E SG+L+GL+RVR F QDDAH+F T EQ+ +E   +   I  +Y+ FGFE
Sbjct: 358 MCEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPEQIESEIKSVLKQIDYVYRTFGFE 417

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPE  +G D LW+ AE+ ++ VL ++        N  V  G+GAFYGPK ++
Sbjct: 418 Y-EVELSTRPEDSMGDDELWNQAESSLENVLKSLNY------NYRVNEGDGAFYGPKIDF 470

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+ R  QCGT+Q+DF +P +F+  Y++  +EK  PV+IHRAV GS +RF+GI+IE+
Sbjct: 471 HIKDALQRSHQCGTVQLDFQMPEKFDLNYIDERNEKRRPVVIHRAVLGSFDRFLGILIEH 530

Query: 542 FKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           F G  P WL+P+Q  V  +++    +Y +EI   LKS  L  E D R+E + YKIRE  +
Sbjct: 531 FGGAFPTWLAPVQIKVIPVSNQVHEQYTKEIEEKLKSVGLRAERDARSEKLGYKIREAQL 590

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +KIP I++ GDKE    S+ +R++G   ++ VSL   +  + KE
Sbjct: 591 QKIPYILVIGDKEMENGSVNVRKYGEEKSEVVSLSAFMESIRKE 634


>gi|301170119|emb|CBW29723.1| threonyl-tRNA synthetase [Haemophilus influenzae 10810]
          Length = 643

 Score =  671 bits (1731), Expect = 0.0,   Method: Composition-based stats.
 Identities = 292/647 (45%), Positives = 427/647 (65%), Gaps = 16/647 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  +VA+ I   LAK  +A  +NG+  D  D +  + ++EIIT +
Sbjct: 4   ITLPDGSQRQFDRPVSVLEVAQDIGAGLAKATIAGRVNGERRDACDVIEQDATLEIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ ++P+V++AIGP IE+GFYYD D ++  + +++  IEK+
Sbjct: 64  DEDGLEIIRHSCAHLLGHAIKQLFPDVKMAIGPTIENGFYYDVDLDRSLTQEDIDAIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K+ ++ ++AR+ FE + E YK+ IL E+I       LY   E+ D+CR
Sbjct: 124 MLELAKTNYDVVKKRVTWQEARDTFEKRGEPYKMAILDENIERTATPALYHHLEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +    + F KL KVAGAYWRGDS   ML RIYGTAW  +++L +YL  LEE+ KR
Sbjct: 184 GPHVPNMRFCQHF-KLQKVAGAYWRGDSKNKMLQRIYGTAWADKKQLAKYLTRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQH 303
           DHRK+ + +DL+H+ E+  G++FWH  GW IF+ L +++R K+ + DY+E+  P ++D+ 
Sbjct: 243 DHRKIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW +Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWQNYADLMFT------TQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+ +E      ++  IY  FGF  I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQIESEVTSCIKMVYDIYSTFGFTNI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPE R+GSD +WD      +         + + +   +  GEGAFYGPK E+ L
Sbjct: 417 AVKLSTRPENRIGSDEMWD------RAEAGLAAALAHNGLEYEIQEGEGAFYGPKIEFAL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D +GR+WQCGT+Q+DF LP R +A YV   + +  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 RDCLGREWQCGTVQLDFALPGRLDATYVAEDNSRKTPVMIHRAILGSIERFIGIITEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P+WL+P QA+V  IT S  +Y Q++A  L    L ++TD RNE + +KIREH+++++
Sbjct: 531 GFFPVWLAPTQAVVINITDSQADYVQKVAKQLSDVGLRVKTDLRNEKVGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDC 650
           P +++CGDKE +E  + +R          ++ +   IL  +    + 
Sbjct: 591 PYMLVCGDKEIAEGKVAVRTRKGADLGTFTVEEFAEILKNQVRSREL 637


>gi|166032032|ref|ZP_02234861.1| hypothetical protein DORFOR_01734 [Dorea formicigenerans ATCC
           27755]
 gi|166028485|gb|EDR47242.1| hypothetical protein DORFOR_01734 [Dorea formicigenerans ATCC
           27755]
          Length = 643

 Score =  671 bits (1731), Expect = 0.0,   Method: Composition-based stats.
 Identities = 269/642 (41%), Positives = 403/642 (62%), Gaps = 16/642 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K+T  DGS+K +    +  D+A+ +S  LA+ A +  +NG++ DL   V  +  +EI+T
Sbjct: 1   MKITLKDGSVKEYEHSMSVIDIAKDLSEGLARVATSGRVNGELVDLRTVVDSDSEVEILT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            ++        H+ +HIMA+A++ ++PE ++AIGP IE+GFYYD D+E PF +++L +IE
Sbjct: 61  FDNEEGKGAFFHTTSHIMAQAIKRLYPETKLAIGPSIENGFYYDLDRETPFVAEDLEKIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M++I+  D    +     ++A   F+ K E YKVE++E +P    ++ Y+QGE+ DLC
Sbjct: 121 KEMKKIVKEDLEITRFTKPRDEAIAYFKEKDEPYKVELIEDLPEDAEISFYQQGEFVDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+ +T +  K  KL  +AGAYWRG+    ML+RIYG ++  + +L +YL  LEE++K
Sbjct: 181 AGPHLMTT-KPVKAIKLTSLAGAYWRGNEKNKMLTRIYGISYPKKAQLDEYLTMLEEAKK 239

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           RDHRKL +E+ LF + E+G G  F+  KG  +  TL+ Y R    K  Y E++TP +L +
Sbjct: 240 RDHRKLGKELGLFMMCEEGPGFPFFLPKGMVLKNTLLDYWRELHKKAGYVEVSTPIILSR 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
           HLW+ SGHWD Y+ NM+  +       D   +A+KPMNCPG + V+    +SY++LP+R+
Sbjct: 300 HLWETSGHWDHYKENMYTTQI------DGEDYAIKPMNCPGGMLVYKAEPRSYKDLPLRV 353

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            E G V+R+E SG LHGLMRVR FTQDDAH+F   EQ+ +E   +  LI  +Y  FGF+ 
Sbjct: 354 GELGLVHRHEKSGQLHGLMRVRCFTQDDAHIFMMPEQIRDEIKGVVALIDEVYSLFGFKY 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +G+D  W+ A   ++G L+ +       ++  V  G+GAFYGPK ++ 
Sbjct: 414 H-VELSTRPENSMGTDEDWELATEGLRGALNDLG------LDYVVNEGDGAFYGPKIDFH 466

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D+IGR WQCGTIQ+D  LP RF   Y  +  EK  P+MIHR  FGSIERFIGI+IE+F
Sbjct: 467 LTDSIGRTWQCGTIQLDMQLPQRFELEYTGADGEKHRPIMIHRVAFGSIERFIGILIEHF 526

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P+Q  V  I+   ++YA ++ + L +  +  E D R E I YKIRE  ++K
Sbjct: 527 AGAFPTWLAPVQVKVLPISDKYMDYANKVLDELNAAGVRAEVDSRAEKIGYKIREAQMQK 586

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IP +++ G+KE     + +R   +    + +L   I  + KE
Sbjct: 587 IPYMLVVGEKEQEADLVSVRSRFAGDEGQKNLETFIADIQKE 628


>gi|331089982|ref|ZP_08338872.1| threonyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA]
 gi|330402896|gb|EGG82462.1| threonyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA]
          Length = 641

 Score =  671 bits (1731), Expect = 0.0,   Method: Composition-based stats.
 Identities = 284/650 (43%), Positives = 406/650 (62%), Gaps = 16/650 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K+T  DGS K +    +  ++A  IS  LA+ A A  I+G+  DL   V ++  + I+T
Sbjct: 1   MKITLKDGSSKEYAQPMSVYEIALDISEGLARVATAGEIDGEEVDLRTVVDKDCELNILT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
             D +     RH+ +HIMA+A++ ++P+ ++AIGP I DGFYYD DKE P ++++L +IE
Sbjct: 61  FNDEKGKGAFRHTASHIMAQAIKRLYPDAKLAIGPSIADGFYYDIDKETPLTAEDLDKIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M++I+  +    +  +  E+A   F+ K E YKVE++E +P  E ++ Y QGE+ DLC
Sbjct: 121 AEMKKIVKENLEIKQYTMPREEAIAYFKEKNEPYKVELIEDLPEGETISFYSQGEFTDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+ +T  VK F KL  +AGAYWRGD +  ML RIYGTA++ + EL +YL  +EE++K
Sbjct: 181 AGPHLMTTKPVKAF-KLTSLAGAYWRGDEHNKMLQRIYGTAFSKKAELEEYLTMIEEAKK 239

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           RDHRKL +E+ LF + E+G G  F+   G  +  TL+ Y R    +  Y EINTP +L +
Sbjct: 240 RDHRKLGKELGLFMMREEGPGFPFFLPNGMVLKNTLLDYWREIHRRAGYVEINTPIMLSR 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
           HLW+ SGHWD Y+ NM+       T+ D   FA+KPMNCPG + V+    +SYR+LP+R+
Sbjct: 300 HLWETSGHWDHYKENMYT------TVVDEEDFAIKPMNCPGGILVYESEPRSYRDLPIRM 353

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            E G V+R+E SG LHGLMRVR FTQDDAH+F T EQ+ +E   +  LI  +Y  FGF+ 
Sbjct: 354 GELGLVHRHEKSGQLHGLMRVRCFTQDDAHIFMTPEQIKDEIKGVVKLIDEVYSLFGFKY 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRP+  +GSD  W+ A + ++  LD I       +   V  G+GAFYGPK ++ 
Sbjct: 414 H-VELSTRPDDSMGSDEDWEMATDALRSALDDIG------LPYIVNEGDGAFYGPKIDFH 466

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+D+IGR WQCGTIQ+DF LP RF   Y  +  EK  P+MIHR VFGSIERFIGI+IE+F
Sbjct: 467 LEDSIGRTWQCGTIQLDFQLPLRFELEYTGADGEKHRPIMIHRVVFGSIERFIGILIEHF 526

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P+Q  V  I+   ++YA ++   LK   +  E D R E I YKIRE  +KK
Sbjct: 527 AGAFPTWLAPVQVKVLPISDKYLDYAGKVLEDLKEAGIRAEIDSRAEKIGYKIREAQMKK 586

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           IP +++ G KE  E  + +R        +  L + I  + +E      ++
Sbjct: 587 IPYMLVVGAKEEEEGKVSVRSRFVGDEGQCGLEEFIEQIKEEVAAKKLRE 636


>gi|294626197|ref|ZP_06704803.1| threonyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292599549|gb|EFF43680.1| threonyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
          Length = 634

 Score =  671 bits (1730), Expect = 0.0,   Method: Composition-based stats.
 Identities = 290/644 (45%), Positives = 422/644 (65%), Gaps = 16/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +T PDGS + F    +   VA+SI   LAK  +A  ++G++ D SD +  + S+ II
Sbjct: 1   MINITLPDGSRREFESPVSVMQVAQSIGAGLAKATIAGQVDGQLVDASDVIDHDASLRII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   + +IRHSCAH++  AV+ ++PEV++ IGP+I +GFYYD   E+PF+ +++A I
Sbjct: 61  TAKDAEGVEIIRHSCAHLVGHAVKQLYPEVKMVIGPVIAEGFYYDIYSERPFTPEDMAAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-ENVTLYRQGEWFD 181
           E++MQE+IA+D   +K+     +  E+F  + E YK+ ++E +      + LY   E+ D
Sbjct: 121 EQRMQELIAQDYDVIKKVTPRAEVIEVFAQRGEEYKLRLIEDMSEDITAMGLYYHQEYVD 180

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           +CRGPHV +T  +K F KL +++GAYWRGD+    L RIYGTAW  +++L  Y+  +EE+
Sbjct: 181 MCRGPHVPNTRFLKAF-KLTRISGAYWRGDAKNEQLQRIYGTAWADKKQLDAYIMRMEEA 239

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
           +KRDHR++ +  DLFH+ E+  G++FWH KGW ++Q +  YMR+  +D  Y E+  PQ+L
Sbjct: 240 DKRDHRRIGKAQDLFHLQEEAPGLVFWHPKGWSLWQVVEQYMRKVYRDSGYGEVRCPQIL 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D  LWQ+SGHWD+Y+  MF       T  + RT+A+KPMNCPGHV VFN GL SYR+LP+
Sbjct: 300 DVSLWQKSGHWDNYQDAMFF------TESEKRTYAVKPMNCPGHVQVFNQGLHSYRDLPI 353

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R  EFG+ +RNEPSG+LHG++RVRGFTQDD HVFC + Q+ +E    H   +++Y  FGF
Sbjct: 354 RYGEFGACHRNEPSGALHGILRVRGFTQDDGHVFCLESQIESEVTAFHQQALAVYTAFGF 413

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           + I +K++ RPEKR+G DA WD AE+ ++  L          +    L GEGAFYGPK E
Sbjct: 414 DDIQIKIALRPEKRLGDDATWDKAESALRSAL------GVCGVEWQELPGEGAFYGPKIE 467

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           Y LKDAIGR WQ GT+QVDF +P R  A YV+ +S+K HPVM+HRA+ GS+ERFIGI+IE
Sbjct: 468 YHLKDAIGRTWQLGTMQVDFMMPGRLGAEYVDENSQKKHPVMLHRAIVGSMERFIGILIE 527

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +  G  P WL+P+Q +V  IT +  EY   +   L +    +  D RNE I YKIREH++
Sbjct: 528 HHAGAFPSWLAPVQVVVANITDAQAEYVDSVRKTLANQGFRVSADLRNEKIGYKIREHTM 587

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +++P +++ GD+E    ++ +R         +++   I  L  E
Sbjct: 588 QRVPYLLVVGDREKENGAVAVRTRSGEDLGTMTVSAFIERLQAE 631


>gi|294792093|ref|ZP_06757241.1| threonine--tRNA ligase [Veillonella sp. 6_1_27]
 gi|294457323|gb|EFG25685.1| threonine--tRNA ligase [Veillonella sp. 6_1_27]
          Length = 641

 Score =  671 bits (1730), Expect = 0.0,   Method: Composition-based stats.
 Identities = 280/644 (43%), Positives = 409/644 (63%), Gaps = 16/644 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEI 61
           +D+K+  PDGS K +    T  +  + +S SLAKK +A  +NG++ DL + + +GS +  
Sbjct: 7   ADVKIILPDGSAKEYAAGTTLGEAVKQLSNSLAKKVLAANVNGELTDLREELVDGSEVAF 66

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +T E+      +RH+ +HI+A+AV+ +WPE ++AIGP I+ GFYYD D E   + ++L +
Sbjct: 67  LTFEEDGGKHTLRHTASHILAQAVKRLWPEAKLAIGPAIDKGFYYDIDMEHTLTPEDLGK 126

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK+M  I+  + P  K  +  ++A E F++K E YKVE+++ +P    ++ Y QG++ D
Sbjct: 127 IEKEMSRIVKENLPITKSVMPRQEAIEFFKAKNEDYKVELIQDLPEDAVISCYSQGDFID 186

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LC GPHV STG+VK F KL  +AGAYWRGD    ML RIYGTA+  ++EL  YL+ LEE+
Sbjct: 187 LCAGPHVASTGKVKAF-KLQSIAGAYWRGDEKNKMLQRIYGTAFEKKEELDAYLHLLEEA 245

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
            KRDHRKL +E+ LF I E+G G  F+  KG  +   L ++ R    D DYEEI TP +L
Sbjct: 246 AKRDHRKLGKELGLFVIKEEGPGFPFFLPKGMALRNELENFWREVHHDFDYEEIRTPIIL 305

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            +HLW+ SGHWD YR NM+       TI D   +A+KPMNCPG + V+ + + SYR+ P+
Sbjct: 306 SKHLWETSGHWDHYRENMYT------TIIDDEEYAIKPMNCPGGILVYQNEMHSYRDFPL 359

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R AE G V+R+E SG+LHGL RVR FTQDDAHVF   +QM  E +K+  L   IY  FG 
Sbjct: 360 RYAELGLVHRHELSGALHGLFRVRAFTQDDAHVFMLPDQMQTELMKVIELFDRIYSQFGL 419

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           +   V+LST+P+  +G DA+W+ A   ++  ++         I   +  G+GAFYGPK +
Sbjct: 420 KYH-VELSTKPDNAMGDDAIWEAATEALRNAIEA------KGIPYVINPGDGAFYGPKLD 472

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           Y ++D++GR WQCGTIQ+D NLP RF   Y+    +K  P+MIHRA FGS+ERFIGI+ E
Sbjct: 473 YHIEDSLGRTWQCGTIQLDMNLPERFQIEYIGEDGQKHRPIMIHRACFGSMERFIGILTE 532

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           ++ G  P W++P+Q  +  I+   VEYA+E+A  +   ++ +E D R+E I YKIR+  +
Sbjct: 533 HYAGAFPTWMAPVQVKILPISEKHVEYAKELAKQMHRDYVRVEVDDRSEKIGYKIRQAQM 592

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            K+P +++ GDKE  E ++ +R+ G      V   +    +  E
Sbjct: 593 AKVPYMLVVGDKEVEEGTVNVRKHGGDELGSVPFEEFFNSIKIE 636


>gi|83951679|ref|ZP_00960411.1| threonyl-tRNA synthetase [Roseovarius nubinhibens ISM]
 gi|83836685|gb|EAP75982.1| threonyl-tRNA synthetase [Roseovarius nubinhibens ISM]
          Length = 648

 Score =  671 bits (1730), Expect = 0.0,   Method: Composition-based stats.
 Identities = 322/651 (49%), Positives = 438/651 (67%), Gaps = 10/651 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
           + I LTFPDG+ +++    T  +VA  IS+SL KKA++  IN    DL  P+  +  I I
Sbjct: 2   AQISLTFPDGNARSYEAGVTPGEVAADISKSLGKKAISATINDAHWDLQWPIQEDARIAI 61

Query: 62  ITP-EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            T  ++P++  +IRH  AHIMA AVQ +WP+V+V IGP+IE+G+YYDFD+ +PF+ ++L 
Sbjct: 62  HTMADEPQANELIRHDLAHIMARAVQELWPDVKVTIGPVIENGWYYDFDRAEPFTPEDLG 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IEKKM+EII +      +     +A + +E   E +KVE++E+IP  E + +Y  G+W 
Sbjct: 122 EIEKKMREIINKRDEVRTEIWDRARAVKHYEDNGEPFKVELIEAIPGDEPLRMYWHGDWQ 181

Query: 181 DLCRGPHVRSTGQ-VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           DLCRGPH++ TGQ     FKLM VAGAYWRGDS+R ML RIYG A+  +++L  +L+ LE
Sbjct: 182 DLCRGPHLQHTGQVPADAFKLMSVAGAYWRGDSSRQMLQRIYGVAFTGKEKLKAHLHMLE 241

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQ 298
           E+ KRDHRKL REMDLFH+ E+  G +FWH  GW I+  L  YMRR  +   Y E+NTPQ
Sbjct: 242 EAAKRDHRKLGREMDLFHMQEEAPGQVFWHPNGWTIYTELQDYMRRAQRAGGYVEVNTPQ 301

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHW+ Y+ +MF V+  ++  ++    ALKPMNCP HV +FN GLKSYR+L
Sbjct: 302 VVDRKLWEKSGHWEKYQEHMFIVEVDEEHAREKAVNALKPMNCPCHVQIFNQGLKSYRDL 361

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFGS  R EPSG+LHG+MRVRGFTQDD H+FC ++Q+ +E  +  + +  +Y+D 
Sbjct: 362 PLRMAEFGSCNRYEPSGALHGVMRVRGFTQDDGHIFCREDQIESETKRFIDFLSRVYRDL 421

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE   VK S RPEKR GSD +WD AE  +K   +    S        +  GEGAFYGPK
Sbjct: 422 GFENFSVKFSDRPEKRSGSDEVWDKAETALKSATEAANCS------FTLNPGEGAFYGPK 475

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E++L DAIGRDWQCGT+QVDF LP R +A Y+     K  PVM+HRA  GS ERFIGI+
Sbjct: 476 LEFVLTDAIGRDWQCGTLQVDFVLPERLDATYIGEDGAKHRPVMLHRATLGSFERFIGIL 535

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE   G LP WL+P Q +V +I S A +Y  E+   L++  +  E D RNE INYK+REH
Sbjct: 536 IEEHAGKLPFWLAPRQVVVASIVSEADDYVHEVVAGLRAQGVRAEADIRNEKINYKVREH 595

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPD 649
           S+ K+P+I+ CG +E  E+++ +RR G   T   +L D    L  E+ PPD
Sbjct: 596 SVGKVPVILACGLREVEEKTVSVRRLGEKQTSVQALADVTKALATEATPPD 646


>gi|257092825|ref|YP_003166466.1| threonyl-tRNA synthetase [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
 gi|257045349|gb|ACV34537.1| threonyl-tRNA synthetase [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
          Length = 638

 Score =  671 bits (1730), Expect = 0.0,   Method: Composition-based stats.
 Identities = 313/640 (48%), Positives = 438/640 (68%), Gaps = 15/640 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS + F    T ++VA+SI   LA+ A+A  I+G++ D S  +  +  + IIT +
Sbjct: 4   VTLPDGSQREFAQPVTVAEVAQSIGAGLARAALAGKIDGRLVDTSFRIDTDVHLGIITEK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           DP  L VIRHS AH+MA AV+ ++P  QV IGP+IE+GFYYDF  E+PF+ ++LA IEK+
Sbjct: 64  DPEGLEVIRHSTAHLMAYAVKELFPAAQVTIGPVIENGFYYDFACERPFTLEDLAAIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M E+  RD    ++    ++A   F+S  E YK E++++IP  + V+LYR+G++ DLCRG
Sbjct: 124 MTELARRDLLVQREVWQRDEAIAFFKSIGEHYKAELIDAIPPGQEVSLYREGDFVDLCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV STG++K F KLMK+AGAYWRGD     L RIYGTAW  +++   YL+ LEE+EKRD
Sbjct: 184 PHVPSTGKLKVF-KLMKLAGAYWRGDHRNEQLQRIYGTAWTRKEDQDAYLHLLEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHL 304
           HRKL R++DLFH+ ++  G++FWH KGW I+Q +  YMRR + +  Y E+ TP ++D+ L
Sbjct: 243 HRKLGRQLDLFHLQDEAPGMVFWHAKGWTIWQEVEQYMRRLLGENGYCEVKTPMIMDRTL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHW +Y  +MF       T  + R +A+KPMNCPGH+ +FN GL+SYR+LP+RLAE
Sbjct: 303 WERSGHWQNYAEHMFT------TASENRDYAIKPMNCPGHIQIFNQGLRSYRDLPLRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNEPSG+LHG+MRVR F QDDAH+FCT+ Q+  E     +L+  IY DFGF  I+
Sbjct: 357 FGSCHRNEPSGALHGIMRVRAFVQDDAHIFCTEAQVLPETAAFIDLLEKIYADFGFTDIL 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           VKLSTRP+KR+GSDA+WD      +      +  +   +   +  GEGAFYGPK E+ LK
Sbjct: 417 VKLSTRPDKRIGSDAVWD------RAEAALAEALAAKGLAYDLQPGEGAFYGPKIEFSLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D +GR WQCGT+Q+DF LP R +A YV   +++  PVM+HRA+ GS+ERFIGI+IE++ G
Sbjct: 471 DCLGRVWQCGTLQLDFALPERLDAHYVGEDNDRHVPVMLHRAILGSLERFIGILIEHYAG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
            +PLWLSP+Q +V  I+    +YA+++A  L+   L  E D RNE I  KIREHS+ K+P
Sbjct: 531 AMPLWLSPMQVVVLNISEKQGDYAEQVAATLRRAGLRAEADLRNEKITRKIREHSLNKLP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
             ++ GDKE +   + +R  G     ++SL   I  L +E
Sbjct: 591 YQVVVGDKEVAANLVAVRTRGGQDLGQMSLESLIRQLLEE 630


>gi|229115852|ref|ZP_04245250.1| Threonyl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|228667595|gb|EEL23039.1| Threonyl-tRNA synthetase [Bacillus cereus Rock1-3]
          Length = 640

 Score =  671 bits (1730), Expect = 0.0,   Method: Composition-based stats.
 Identities = 282/644 (43%), Positives = 432/644 (67%), Gaps = 17/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEII 62
            I++ FPDGS+K F    T  ++A SIS SL +KAVA  +N ++ DL   + E   +EII
Sbjct: 5   MIEIKFPDGSVKEFVKGITLEEIAGSISSSLKRKAVAGKVNDQLYDLRRNIEENAEVEII 64

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +    + + RHS AHI+A+AV+ ++ ++ + +GP+IE+GFYYD D     + ++L +I
Sbjct: 65  TIDSNDGVEIARHSAAHILAQAVKRLYGDINLGVGPVIENGFYYDMDLPSSVNVEDLPKI 124

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M+ II  +    +  +S E+A +LF+   +  K+E+LE+IP+ E+VTLY+QGE+ DL
Sbjct: 125 EKEMRNIIKENISIERVEVSREEAAKLFQEMNDRLKLELLEAIPSGESVTLYKQGEFVDL 184

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG +K F     V+GAYWRGDSN  +L RIYG A+++Q+EL +YL+F+EE+ 
Sbjct: 185 CRGPHVPSTGYLKAFQLTH-VSGAYWRGDSNNQVLQRIYGVAFSSQKELEEYLHFVEEAA 243

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KR+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R  + + +Y+E+ TP +++
Sbjct: 244 KRNHRKLGNELELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMN 303

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           Q +W++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R
Sbjct: 304 QEVWERSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIR 357

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           + EFG V+R+E SG+L+GL+RVR F QDDAH+F T EQ+ +E   +   I  +YK FGFE
Sbjct: 358 MCEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPEQIEDEIKSVMGQIDYVYKTFGFE 417

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPE  +G D LW+ AE  ++ VL ++           +  G+GAFYGPK ++
Sbjct: 418 Y-EVELSTRPEDSMGDDKLWEQAEAALENVLQSLNY------KYRLNEGDGAFYGPKIDF 470

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+ R  QCGTIQ+DF +P +F+  Y++  +EK  PV+IHRAV GS++RF+ I+IE+
Sbjct: 471 HIKDALNRSHQCGTIQLDFQMPEKFDLNYIDVKNEKKRPVVIHRAVLGSLDRFLAILIEH 530

Query: 542 FKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           F G  P W++P+Q  V  ++++  V+YA E+A+ L    + IE D R+E + YKIRE  +
Sbjct: 531 FGGAFPAWVAPVQVKVIPVSNAVHVQYANEVADKLAQAGVRIERDVRDEKLGYKIREAQM 590

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +KIP +++ GDKE    S+ +R++G   ++ V+L      + +E
Sbjct: 591 QKIPYVLVIGDKEMENGSVNVRKYGEEKSEVVALDVFAASMEEE 634


>gi|145631389|ref|ZP_01787160.1| threonyl-tRNA synthetase [Haemophilus influenzae R3021]
 gi|144983048|gb|EDJ90552.1| threonyl-tRNA synthetase [Haemophilus influenzae R3021]
          Length = 643

 Score =  671 bits (1730), Expect = 0.0,   Method: Composition-based stats.
 Identities = 291/647 (44%), Positives = 424/647 (65%), Gaps = 16/647 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  +VA+ I   LAK  +A  +NG+  D  D +  + ++EIIT +
Sbjct: 4   ITLPDGSQRQFDRPVSVLEVAQDIGAGLAKATIAGRVNGERHDACDIIEQDATLEIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ ++P+V++AIGP IE+GFYYD D ++  + ++L  IEK+
Sbjct: 64  DEDGLEIIRHSCAHLLGHAIKQLFPDVKMAIGPTIENGFYYDVDLDRSLTQEDLDAIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K+ ++ ++AR+ FE + E YK+ IL E+I       LY   E+ D+CR
Sbjct: 124 MLELAKTNYDVVKKRVTWQEARDTFEKRGEPYKMAILDENIERTATPALYHHLEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +    + F KL KVAGAYWRGDS   ML RIYGTAW  +++L +YL  LEE+ KR
Sbjct: 184 GPHVPNMRFCQHF-KLQKVAGAYWRGDSKNKMLQRIYGTAWADKKQLAEYLTRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQH 303
           DHRK+ + +DL+H+ E+  G++FWH  GW IF+ L +++R K+ + DY+E+  P ++D+ 
Sbjct: 243 DHRKIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW +Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWQNYADLMFT------TQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+ +E      ++  IY  FGF  I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQIESEVTSCIKMVYDIYSTFGFTNI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPE R+GSD +WD      +         + + +   +  GEGAFYGPK E+ L
Sbjct: 417 AVKLSTRPENRIGSDEMWD------RAEAGLAAALAHNGLEYEIQEGEGAFYGPKIEFAL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D +GR+WQCGT+Q+DF LP R +A YV   + +  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 RDCLGREWQCGTVQLDFALPGRLDATYVAEDNSRKTPVMIHRAILGSIERFIGIITEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P QA+V  IT S  +Y Q++   L    L ++ D RNE + +KIREH+++++
Sbjct: 531 GFFPAWLAPTQAVVINITDSQSDYVQQVVKTLSDAGLRVKADLRNEKVGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDC 650
           P +++CGDKE +E  + +R          ++ +   IL  +    + 
Sbjct: 591 PYMLVCGDKEIAEGKVAVRTRKGADLGTFTVEEFAEILKNQVRSREL 637


>gi|324326401|gb|ADY21661.1| threonyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 639

 Score =  671 bits (1730), Expect = 0.0,   Method: Composition-based stats.
 Identities = 279/644 (43%), Positives = 428/644 (66%), Gaps = 17/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEII 62
            I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N  + DL   + E   +EII
Sbjct: 5   MIEIKFPDGSVKEFVKGITLEEIAGSISNSLKKKAVAGKVNDGLYDLRRNIEENAEVEII 64

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +    + + RHS AHI+A+AV+ ++ ++ + +GP+IE+GFYYD D     +  +L +I
Sbjct: 65  TLDSDEGVEIARHSAAHILAQAVKRLYGDINLGVGPVIENGFYYDMDLPSSVNVQDLRKI 124

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M+ II  +    +  +S E+A +LF+   +  K+E+LE+IP +E+VTLY+QGE+ DL
Sbjct: 125 EKEMKNIIKENINIERVEVSREEAAKLFQEMNDRLKLELLEAIPDEESVTLYKQGEFVDL 184

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ STG +K F     V+GAYWRGDSN  +L RIYG A+++Q+EL +YL+F+EE+ 
Sbjct: 185 CRGPHLPSTGYLKAFQLTH-VSGAYWRGDSNNQVLQRIYGVAFSSQKELEEYLHFVEEAA 243

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KR+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R  + + +Y+E+ TP +++
Sbjct: 244 KRNHRKLGNELELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMN 303

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           Q +W++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R
Sbjct: 304 QEVWERSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIR 357

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           + EFG V+R+E SG+L+GL+RVR F QDDAH+F T EQ+ +E   +   I  +YK FGFE
Sbjct: 358 MCEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPEQIEDEIKSVMAQIDYVYKTFGFE 417

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPE  +G D LW+ AE  +  VL ++           +  G+GAFYGPK ++
Sbjct: 418 Y-EVELSTRPEDSMGDDKLWEQAEAALANVLHSLNC------KYRLNEGDGAFYGPKIDF 470

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+ R  QCGTIQ+DF +P +F+  Y++  +EK  PV+IHRAV GS++RF+ I+IE+
Sbjct: 471 HIKDALNRSHQCGTIQLDFQMPEKFDLNYIDEKNEKRRPVVIHRAVLGSLDRFLAILIEH 530

Query: 542 FKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           F G  P W++P+Q  V  ++++  V+YA EIA+ L    + +E D R E + YKIRE  +
Sbjct: 531 FGGAFPAWVAPVQVKVIPVSNAVHVQYADEIADKLAQAGVRVERDVRGEKLGYKIREAQM 590

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +K+P +++ GDKE    ++ +R++G   ++ + L   +  + +E
Sbjct: 591 QKVPYVLVIGDKEMENGAVNVRKYGEEKSEVIELNGFVESIKEE 634


>gi|331269136|ref|YP_004395628.1| threonyl-tRNA synthetase [Clostridium botulinum BKT015925]
 gi|329125686|gb|AEB75631.1| threonyl-tRNA synthetase [Clostridium botulinum BKT015925]
          Length = 637

 Score =  671 bits (1730), Expect = 0.0,   Method: Composition-based stats.
 Identities = 296/643 (46%), Positives = 417/643 (64%), Gaps = 16/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEII 62
            IK+T  DG +       T S++A  IS SL KKA+   ING+  +L D + +  S+EI+
Sbjct: 1   MIKITLKDGKVLEMEKGLTVSEIAARISTSLRKKALGAKINGEKGELMDIINDDCSLEIL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T ED      +RH+ +HI+A+AV+ ++P+V++AIGP IE+GFYYDFD E  F+ + L +I
Sbjct: 61  TFEDQEGKDTLRHTASHILAQAVKRLYPDVKLAIGPSIENGFYYDFDAEFSFTPEILEKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M +I+  +    K  L  ++A +  + + E YK+E++E +P    ++ Y +GE+ DL
Sbjct: 121 EKEMNKIVKENLELKKFTLPRDEAIKFMKERNEDYKIELIEDLPEDAVISFYEEGEFVDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPHV ST +VK   KL+ VAGAYWRG+ N  ML RIYGTA+  + +L Q+L+ LEE++
Sbjct: 181 CAGPHVPSTKEVK-AIKLLSVAGAYWRGNENNKMLQRIYGTAFTKKADLEQHLHMLEEAK 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KRDHRKL +E+ LF + E+G G  F++ KG  +  TL +Y R    K  Y EI TP +L+
Sbjct: 240 KRDHRKLGKELGLFDLKEEGPGFPFFYPKGMILRNTLENYWREMHEKAGYGEIRTPIILN 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW QSGHWD Y+ NM+  K       D   +A+KPMNCPG + V+   L SYRELP+R
Sbjct: 300 EKLWHQSGHWDHYKENMYFTKI------DGEDYAIKPMNCPGSILVYKSDLHSYRELPIR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           L E G V+R+E SG+LHGLMRVR FTQDDAH+F TKEQ+ +E L +  +I + Y  FGFE
Sbjct: 354 LGELGLVHRHEYSGALHGLMRVRNFTQDDAHIFMTKEQITSEILGVIKMIDNFYGLFGFE 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPE  +GSD  W+DA N +   L+         +   +  G+GAFYGPK ++
Sbjct: 414 YF-VELSTRPEDSMGSDEDWEDATNGLVKALNEAG------LEYKINEGDGAFYGPKIDF 466

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L+D +GR WQCGTIQ+DF +P RF+  YV +  EK  PVM HR +FGSIERFIGI+ E+
Sbjct: 467 HLRDCLGRTWQCGTIQLDFQMPERFDLSYVGADGEKHRPVMAHRVIFGSIERFIGILTEH 526

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  P WL+P+Q  +  IT + VEY +EI   LK + + +E D RNE I YKIRE  ++
Sbjct: 527 YAGAFPTWLAPVQVKIMNITDNQVEYCKEIEKTLKENGIRVELDLRNEKIGYKIREAQLQ 586

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIP +++ GDKE +E +I +R         + L+D + ++ KE
Sbjct: 587 KIPYMLVLGDKEMNENTIAVRSRKQGDLGAMQLVDFVAMVKKE 629


>gi|323692417|ref|ZP_08106653.1| threonine-tRNA ligase [Clostridium symbiosum WAL-14673]
 gi|323503557|gb|EGB19383.1| threonine-tRNA ligase [Clostridium symbiosum WAL-14673]
          Length = 645

 Score =  670 bits (1729), Expect = 0.0,   Method: Composition-based stats.
 Identities = 283/651 (43%), Positives = 408/651 (62%), Gaps = 15/651 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            +K+T  DGS+K +       D+A+ IS  LA+ A A  I+G+  DL   V ++  ++I+
Sbjct: 1   MMKITLKDGSVKEYENQMAVIDIAKDISEGLARMACAGEIDGETVDLRTIVCQDCRLDIL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   LA +RH+ +H+MA+AV+ ++P+ ++AIGP I DGFYYD D   P ++++L +I
Sbjct: 61  TAKDENGLAALRHTASHVMAQAVKRLYPDTKLAIGPSIADGFYYDVDPATPLTAEDLPKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M++II       +  LS E+A  L + K+E YKVE++E +P    ++ YRQGE+ DL
Sbjct: 121 ETEMKKIIKEGLALERFTLSREEAIALMKEKEEPYKVELIEDLPEDAEISFYRQGEFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPH+ +T  V K FKLM +AGAYWRG     ML+RIY TA+  ++EL  YL  +EE+ 
Sbjct: 181 CAGPHLMNTKGVGKAFKLMNLAGAYWRGSEKNKMLTRIYATAFAGKEELESYLRMMEEAR 240

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KRDHRKL RE+ LF + + G G  F+  KG ++  TL+ Y R+   K  Y EI+TP +L+
Sbjct: 241 KRDHRKLGRELGLFMMHDAGPGFPFFLPKGMELKNTLLEYWRQIHKKAGYVEISTPVILN 300

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHWD Y+ NM+       T+ D   +A+KPMNCPG V  +    +SYR+LP+R
Sbjct: 301 RKLWETSGHWDHYKDNMYT------TVIDEEDYAIKPMNCPGGVLAYASEPRSYRDLPLR 354

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           + E G V+R+E SG LHGLMRVR FTQDDAH+F T +Q+ +E   + +LI  +Y  FGF+
Sbjct: 355 MGELGLVHRHEKSGQLHGLMRVRCFTQDDAHIFMTPDQIKDEIKGVAHLINEVYSLFGFK 414

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPE  +GSD  W+ A   ++  LD +       ++  V  G+GAFYGPK ++
Sbjct: 415 YH-VELSTRPEDSMGSDEDWEMATEGLRSALDELG------LDYVVNEGDGAFYGPKIDF 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L+D+IGR WQCGTIQ+DF LP RF   Y  +  EK  P+MIHR  FGSIERFIGI+IE+
Sbjct: 468 HLEDSIGRTWQCGTIQLDFQLPQRFELEYTGADGEKHRPIMIHRVAFGSIERFIGILIEH 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           F G  P WL+P+Q  V  I+    +YA+ +   L+   +  E D R+E I YKIRE   +
Sbjct: 528 FAGAFPTWLAPVQVKVLPISDKYADYAKTVLEELEEAGIRAELDTRSEKIGYKIREAQTQ 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           KIP +++ G KE  E ++ +R   +      S    I  + KE    + ++
Sbjct: 588 KIPYMLVVGQKEEEEGNVSVRSRFAGDEGSDSTAGFIEKIKKEIAGKEIRQ 638


>gi|148825906|ref|YP_001290659.1| threonyl-tRNA synthetase [Haemophilus influenzae PittEE]
 gi|166223344|sp|A5UBX5|SYT_HAEIE RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|148716066|gb|ABQ98276.1| threonyl-tRNA synthetase [Haemophilus influenzae PittEE]
          Length = 643

 Score =  670 bits (1729), Expect = 0.0,   Method: Composition-based stats.
 Identities = 290/648 (44%), Positives = 425/648 (65%), Gaps = 16/648 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  +VA+ I   LAK  +A  +NG+  D  D +  + ++EIIT +
Sbjct: 4   ITLPDGSQRQFDHPVSVLEVAQDIGAGLAKATIAGRVNGERRDACDVIEQDATLEIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ ++P+V++AIGP IE+GFYYD D ++  + +++  IEK+
Sbjct: 64  DEDGLEIIRHSCAHLLGHAIKQLFPDVKMAIGPTIENGFYYDVDLDRSLTQEDIDAIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K+ ++ ++AR+ FE + E YK+ IL E+I       LY   E+ D+CR
Sbjct: 124 MLELAKTNYDVVKKRVTWQEARDTFEKRGEPYKMAILDENIERTATPALYHHLEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +    + F KL KVAGAYWRGDS   ML RIYGTAW  +++L +YL  LEE+ KR
Sbjct: 184 GPHVPNMRFCQHF-KLQKVAGAYWRGDSKNKMLQRIYGTAWADKKQLAEYLTRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQH 303
           DHRK+ + +DL+H+ E+  G++FWH  GW IF+ L +++R K+ + DY+E+  P ++D+ 
Sbjct: 243 DHRKIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW +Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWQNYADLMFT------TQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+ +E      ++  IY  FGF  I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQIESEVTSCIKMVYDIYSTFGFTNI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPE R+GSD +WD      +         + + +   +  GEGAFYGPK E+ L
Sbjct: 417 AVKLSTRPENRIGSDEMWD------RAEAGLAAALAHNGLEYEIQEGEGAFYGPKIEFAL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D +GR+WQCGT+Q+DF LP R +A YV   + +  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 RDCLGREWQCGTVQLDFALPGRLDATYVAEDNSRKTPVMIHRAILGSIERFIGIITEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P QA+V  IT S  +Y Q++   L    L ++ D RNE + +KIREH+++++
Sbjct: 531 GFFPAWLAPTQAVVMNITDSQSDYVQQVVKTLSDAGLRVKADLRNEKVGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           P +++CGDKE +E  + +R          ++ +   IL  +    + +
Sbjct: 591 PYMLVCGDKEIAEGKVAVRTRKGADLGTFTVEEFAEILKNQVRSRELK 638


>gi|15615703|ref|NP_244007.1| threonyl-tRNA synthetase 1 [Bacillus halodurans C-125]
 gi|20139931|sp|Q9K866|SYT_BACHD RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|10175763|dbj|BAB06860.1| threonyl-tRNA synthetase 1 [Bacillus halodurans C-125]
          Length = 645

 Score =  670 bits (1729), Expect = 0.0,   Method: Composition-based stats.
 Identities = 250/655 (38%), Positives = 413/655 (63%), Gaps = 22/655 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           M   I +TFPDG++K FP   T +++A SIS  L KKA+A  ++G + DL+ P+  +G+I
Sbjct: 1   MADMINITFPDGAVKEFPKGTTTAEIAGSISPGLKKKALAGMLDGTLLDLNTPIEQDGTI 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE--VQVAIGPIIEDGFYYDFDKEQPFSSD 117
            I+TPE   +L V+RHS AH+MA+A++ ++ +  V++ +GP+IE GFYYD D ++  + +
Sbjct: 61  TIVTPESDEALEVLRHSTAHVMAQALKRLFKDRNVKLGVGPVIEGGFYYDVDMDESLTPE 120

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +L +IEK+M++II  + P  +  +S E+A   +E   + YK+E++  +P  E +T+Y QG
Sbjct: 121 DLPKIEKEMKKIIGENLPIERVVVSREEALARYEEVGDPYKIELINDLPEDETITIYEQG 180

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           E+FDLCRG HV STG++K+F KL+ +AGAYWRGDS+  ML RIYGTA+  + +L ++L  
Sbjct: 181 EFFDLCRGVHVPSTGKLKEF-KLLNLAGAYWRGDSSNKMLQRIYGTAFFKKADLDEHLRL 239

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEIN 295
           LEE+++RDHRKL +E+ +F +++    G+  W  KG  I + +  Y+  ++ K  Y+ + 
Sbjct: 240 LEEAKERDHRKLGKELGIFALSQKVGQGLPLWLPKGATIRRIIERYIVDKEEKLGYQHVY 299

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP +    L++ SGHWD Y+ +MF     ++         L+PMNCP H+ V+   ++SY
Sbjct: 300 TPVLASSELYKTSGHWDHYKDDMFPTMEMEN-----EELVLRPMNCPHHMMVYKTEMRSY 354

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           R+LP+R+AE G ++R E SG++ GL RVRG T +DAH+FC  +Q+ +E +++  LI ++Y
Sbjct: 355 RQLPLRIAELGLMHRYEMSGAVSGLQRVRGMTLNDAHIFCRPDQIKDEFVRVVRLIQAVY 414

Query: 416 KDFGFEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
           +DFG +    +LS R      K    D +W+ A+ ++K  +D ++      +      GE
Sbjct: 415 EDFGLKNYSFRLSYRDPEDKEKYFDDDNMWNKAQGMLKEAMDELE------LEYFEAEGE 468

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
            AFYGPK +  ++ A+G+D    T+Q+DF LP RF+  YV    +   PV++HR V  ++
Sbjct: 469 AAFYGPKLDVQVRTALGKDETLSTVQLDFLLPERFDLTYVGEDGQPHRPVVVHRGVVSTM 528

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNET 590
           ERF+  ++E +KG  P WL+P+Q  V  ++    +EYA+ +   L+   + +E D R+E 
Sbjct: 529 ERFVAFLLEEYKGAFPTWLAPVQVQVIPVSPEAHLEYAKNVQETLQQAGIRVEIDERDEK 588

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           I YKIRE  ++KIP +++ GDKE     + +R++G   +  + L + +  + +E+
Sbjct: 589 IGYKIREAQMQKIPYMLVLGDKEVEANGVNVRKYGEKDSSSMGLDEFVRHVAREA 643


>gi|113460987|ref|YP_719054.1| threonyl-tRNA synthetase [Haemophilus somnus 129PT]
 gi|123031343|sp|Q0I3M2|SYT_HAES1 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|112823030|gb|ABI25119.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Haemophilus
           somnus 129PT]
          Length = 642

 Score =  670 bits (1729), Expect = 0.0,   Method: Composition-based stats.
 Identities = 298/647 (46%), Positives = 431/647 (66%), Gaps = 16/647 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS + F    +  +VA+SI   LAK  +A  +NG+  D SD +  + ++EIIT +
Sbjct: 4   ITLPDGSQRQFDNPVSVLEVAQSIGSGLAKATIAGRVNGERRDASDMISEDANLEIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHS AH++  A++ ++P V++AIGP I++GFYYD D ++  + +++  +EK+
Sbjct: 64  DEDGLEIIRHSTAHLLGHAIKQLFPNVKMAIGPTIDNGFYYDIDLDRSLTQEDIDTLEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K+ +S ++AR+ FES+ E YK+ IL E+I   +   LY   E+ D+CR
Sbjct: 124 MLELAKTNYDVIKKRVSWQEARDTFESRAEPYKIAILDENIAKDDQPALYHHEEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +      F KLMKVAGAYWRG+S+  ML RIYGTAW  +++L  YL+ LEE+ KR
Sbjct: 184 GPHVPNMRFCHHF-KLMKVAGAYWRGNSDNKMLQRIYGTAWADKKQLADYLHRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ + +DL+H+ E+  G++FWH  GW IF+ L +++R K+K+ DY+E+  P ++D+ 
Sbjct: 243 DHRKIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW +Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWERTGHWQNYADLMFT------TQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+ +E      ++  IY  FGF  I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQIESEVTSCIKMVYDIYSTFGFTDI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPEKR+G D +WD AE  +   L        + +   +  GEGAFYGPK E+ L
Sbjct: 417 FVKLSTRPEKRIGEDVMWDRAEQGLANALKH------NGLEYEIQEGEGAFYGPKIEFAL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D + R+WQCGTIQ+DF LP R +A YV   + +  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 RDCLDREWQCGTIQLDFALPGRLDATYVAEDNARRTPVMIHRAILGSIERFIGIITEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+PIQA+V  IT S  +Y Q++        L ++ D RNE + +KIREH+++++
Sbjct: 531 GFFPTWLAPIQAVVMNITDSQADYVQKVVKQFSEAGLRVKADIRNEKVGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDC 650
           P +++CGDKE  E  I +R    T     S+ + + IL ++    + 
Sbjct: 591 PYMLVCGDKEIVENKIAVRTRKGTDLGTFSVEEFVEILKQQVRKREL 637


>gi|68250118|ref|YP_249230.1| threonyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
 gi|81335458|sp|Q4QK77|SYT_HAEI8 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|68058317|gb|AAX88570.1| threonyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
          Length = 643

 Score =  670 bits (1729), Expect = 0.0,   Method: Composition-based stats.
 Identities = 290/648 (44%), Positives = 425/648 (65%), Gaps = 16/648 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  +VA+ I   LAK  +A  +NG+  D  D +  + ++EIIT +
Sbjct: 4   ITLPDGSQRQFDRPVSVLEVAQDIGAGLAKATIAGRVNGERRDACDVIEQDATLEIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ ++P+V++AIGP IE+GFYYD D ++  + +++  IEK+
Sbjct: 64  DEDGLEIIRHSCAHLLGHAIKQLFPDVKMAIGPTIENGFYYDVDLDRSLTQEDIDAIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K+ ++ ++AR+ FE + E YK+ IL E+I       LY   E+ D+CR
Sbjct: 124 MLELAKTNYDVVKKRVTWQEARDTFEKRGEPYKMAILDENIERTATPALYHHLEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +    + F KL KVAGAYWRGDS   ML RIYGTAW  +++L +YL  LEE+ KR
Sbjct: 184 GPHVPNMRFCQHF-KLQKVAGAYWRGDSKNKMLQRIYGTAWADKKQLAEYLTRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQH 303
           DHRK+ + +DL+H+ E+  G++FWH  GW IF+ L +++R K+ + DY+E+  P ++D+ 
Sbjct: 243 DHRKIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW +Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWQNYADLMFT------TQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+ +E      ++  IY  FGF  I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQIESEVTSCIKMVYDIYSTFGFTNI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPE R+GSD +WD      +         + + +   +  GEGAFYGPK E+ L
Sbjct: 417 AVKLSTRPENRIGSDEMWD------RAEAGLAAALAHNGLEYEIQEGEGAFYGPKIEFAL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D +GR+WQCGT+Q+DF LP R +A YV   + +  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 RDCLGREWQCGTVQLDFALPGRLDATYVAEDNSRKTPVMIHRAILGSIERFIGIITEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P QA+V  IT S  +Y Q++   L    L ++ D RNE + +KIREH+++++
Sbjct: 531 GFFPAWLAPTQAVVMNITDSQADYVQQVVKTLSDAGLRVKADLRNEKVGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           P +++CGDKE +E  + +R          ++ +   IL  +    + +
Sbjct: 591 PYMLVCGDKEIAEGKVAVRTRKGADLGTFTVEEFAEILKNQVRSRELK 638


>gi|296332117|ref|ZP_06874581.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305675488|ref|YP_003867160.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|296150888|gb|EFG91773.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305413732|gb|ADM38851.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 643

 Score =  670 bits (1729), Expect = 0.0,   Method: Composition-based stats.
 Identities = 261/653 (39%), Positives = 415/653 (63%), Gaps = 20/653 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M   +K+TFPDG++K F    T  D+A SIS  L KK++A  +NGK  DL  P+  +G++
Sbjct: 1   MSDMVKITFPDGAVKEFAKGTTTEDIAASISPGLKKKSLAGKLNGKEIDLRTPINEDGTV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT      L ++RHS AH++A+A++ I+ +V+  +GP+IE+GFYYD + E+  + ++L
Sbjct: 61  EIITEGSEEGLQIMRHSTAHLLAQAIKRIYKDVKFGVGPVIENGFYYDVEMEEAITPEDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IEK+M++I+  + P +++ +S E+A+  F    +  K+E+L++IP  E V++Y QGE+
Sbjct: 121 PKIEKEMKKIVNANLPIVRKEVSREEAKARFAEIGDDLKLELLDAIPEGETVSIYEQGEF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRG HV STG++K+F KL+ +AGAYWRGDSN  ML R+YGTA+  + +L ++L  LE
Sbjct: 181 FDLCRGVHVPSTGKIKEF-KLLSLAGAYWRGDSNNQMLQRVYGTAFFKKADLEEHLRMLE 239

Query: 240 ESEKRDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTP 297
           E+++RDHRKL +E+ LF +  + G G+  W  KG  I + +  Y+  ++I   YE + TP
Sbjct: 240 EAKERDHRKLGKELKLFANSQKVGQGLPLWLPKGATIRRVIERYIVDKEISLGYEHVYTP 299

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +  + L++ SGHWD Y+  MF     D+      T  L+PMNCP H+ ++   + SYRE
Sbjct: 300 VLGSKELYETSGHWDHYQEGMFPPMEMDN-----ETLVLRPMNCPHHMMIYKQDIHSYRE 354

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+ +E ++   LI  +Y+D
Sbjct: 355 LPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKDEFIRTVRLIQDVYED 414

Query: 418 FGFEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           FG      +LS R      K    D +W+ A++++K  +D I +      +     GE A
Sbjct: 415 FGLSDYTFRLSYRDPEDTEKYFDDDEMWNKAQSMLKEAMDEIGH------DYYEAEGEAA 468

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  +K AIG++    T+Q+DF LP RF+  Y+    ++  PV+IHR V  ++ER
Sbjct: 469 FYGPKLDVQVKTAIGKEETLSTVQLDFLLPERFDLTYIGEDGKQHRPVVIHRGVVSTMER 528

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETIN 592
           F+  +IE  KG LP WL+P+Q  V  ++ S  ++YA+++   L+   L +E D R+E I 
Sbjct: 529 FVAFLIEEHKGALPTWLAPVQFQVIPVSPSVHLDYAKKVQERLQREGLRVEVDSRDEKIG 588

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           YKIRE  ++KIP +++ GD+EA   ++ +R++G   ++ +SL D +     E+
Sbjct: 589 YKIREAQMQKIPYMLVVGDQEAENGAVNVRKYGEQNSETISLDDFVKKAVAEA 641


>gi|166711588|ref|ZP_02242795.1| threonyl-tRNA synthetase [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 634

 Score =  670 bits (1729), Expect = 0.0,   Method: Composition-based stats.
 Identities = 287/644 (44%), Positives = 419/644 (65%), Gaps = 16/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +T PDGS + F    +   VA+SI   LAK  +A  ++G++ D SD +  + S+ II
Sbjct: 1   MINITLPDGSRREFESPVSVMQVAQSIGAGLAKATIAGQVDGQLVDASDVIDHDASLRII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   + +IRHSCAH++  AV+ ++PEV++ IGP+I +GFYYD   E+PF+ +++A I
Sbjct: 61  TAKDAEGVEIIRHSCAHLVGHAVKQLYPEVKMVIGPVIAEGFYYDIYSERPFTPEDMAAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-ENVTLYRQGEWFD 181
           E++MQ +IA+D   +K+     +  E+F  + E YK+ +++ +      + LY   E+ D
Sbjct: 121 EQRMQALIAQDYDVIKKVTPRAEVIEVFAQRGEEYKLRLIDDMSDDITAMGLYYHQEYVD 180

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           +CRGPHV +T  +K F KL +++GAYWRGD+    L RIYGTAW  +++L  Y+  +EE+
Sbjct: 181 MCRGPHVPNTRFLKAF-KLTRISGAYWRGDAKNEQLQRIYGTAWADKKQLDAYILRMEEA 239

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
           +KRDHR++ +  DLFH+ E+  G++FWH KGW ++Q +  YMR+  +D  Y E+  PQ+L
Sbjct: 240 DKRDHRRIGKAQDLFHLQEEAPGLVFWHPKGWSLWQVVEQYMRKVYRDSGYGEVRCPQIL 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D  LWQ+SGHWD+Y+  MF       T  + RT+A+KPMNCPGHV VFN GL SYR+LP+
Sbjct: 300 DVSLWQKSGHWDNYQDAMFF------TESEKRTYAVKPMNCPGHVQVFNQGLHSYRDLPI 353

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R  EFG+ +RNEPSG+LHG++RVRGFTQDD HVFC + Q+ +E    H   +++Y  FGF
Sbjct: 354 RYGEFGACHRNEPSGALHGILRVRGFTQDDGHVFCLESQIESEVTAFHQQALAVYTAFGF 413

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           + I +K++ RPEKR+G DA WD AE  ++  L          +    L GEGAFYGPK E
Sbjct: 414 DDIQIKIALRPEKRLGDDATWDKAEAALRSAL------GVCGVEWQELPGEGAFYGPKIE 467

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           Y LKDAIGR WQ GT+QVDF +P R  A YV+ +S+K HPVM+HRA+ GS+ERFIGI+IE
Sbjct: 468 YHLKDAIGRTWQLGTMQVDFMMPGRLGAEYVDENSQKKHPVMLHRAIVGSMERFIGILIE 527

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +  G  P WL+P+Q +V  IT +  +Y   +   L +    +  D RNE I YKIREH +
Sbjct: 528 HHAGAFPSWLAPVQVVVANITDAQADYVDAVRKTLANQGFRVSADLRNEKIGYKIREHML 587

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +++P +++ GD+E    ++ +R         +++   I  L  E
Sbjct: 588 QRVPYLLVVGDREKENGAVAVRTRSGEDLGTMTVSAFIERLQAE 631


>gi|229178727|ref|ZP_04306091.1| Threonyl-tRNA synthetase [Bacillus cereus 172560W]
 gi|228604885|gb|EEK62342.1| Threonyl-tRNA synthetase [Bacillus cereus 172560W]
          Length = 640

 Score =  670 bits (1729), Expect = 0.0,   Method: Composition-based stats.
 Identities = 279/644 (43%), Positives = 432/644 (67%), Gaps = 17/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEII 62
            I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N  + DL   + E   +EII
Sbjct: 5   MIEIKFPDGSVKEFVNGVTLEEIAGSISSSLKKKAVAGKVNDGLYDLRRNIEENAEVEII 64

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +    + + RHS AHI+A+AV+ ++ ++ + +GP+IE+GFYYD D     + ++L +I
Sbjct: 65  TIDSNEGVEIARHSAAHILAQAVKRLYGDINLGVGPVIENGFYYDMDLPSSVNIEDLRKI 124

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M++II  +    +  +S E+A +LF+   +  K+E+LE+IP+ E+VTLY+QGE+ DL
Sbjct: 125 EKEMKKIINENIKIERVEVSREEAAKLFQEMNDRLKLELLEAIPSGESVTLYKQGEFVDL 184

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ STG +K F     V+GAYWRGDSN  +L RIYG A+++Q+EL +YL+F+EE+ 
Sbjct: 185 CRGPHLPSTGYLKAFQLTH-VSGAYWRGDSNNQVLQRIYGVAFSSQKELEEYLHFVEEAA 243

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KR+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R  + +  Y+E+ TP +++
Sbjct: 244 KRNHRKLGSELELFMFSEEAPGMPFYLPKGQMIRNELEAFLREIQKEYKYQEVRTPFMMN 303

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           Q +W++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R
Sbjct: 304 QEVWERSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIR 357

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           + EFG V+R+E SG+L+GL+RVR F QDDAH+F T +Q+ +E   +   I  +YK FGFE
Sbjct: 358 MCEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPKQIEDEIKSVMAQIDYVYKTFGFE 417

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPE  +G D LW+ AE  ++ VL ++           +  G+GAFYGPK ++
Sbjct: 418 Y-EVELSTRPEDSMGDDKLWEQAEAALENVLQSLNY------KYRLNEGDGAFYGPKIDF 470

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+ R  QCGTIQ+DF +P +F+  Y++ ++EK  PV+IHRAV GS++RF+ I+IE+
Sbjct: 471 HIKDALNRSHQCGTIQLDFQMPEKFDLNYIDENNEKKRPVVIHRAVLGSLDRFLAILIEH 530

Query: 542 FKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           F G  P W++P+Q  V  ++++  V+YA E+A+ L    + +E D R+E + YKIRE  +
Sbjct: 531 FGGAFPAWVAPVQVKVIPVSNAVHVQYADEVADKLAQAGVRVERDVRDEKLGYKIREAQM 590

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +K+P I++ GDKE    ++ +R++G   ++ V+L      + +E
Sbjct: 591 QKVPYILVIGDKEMENGAVNVRKYGEEKSEVVTLNVFAASIEEE 634


>gi|229102972|ref|ZP_04233661.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-28]
 gi|228680387|gb|EEL34575.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-28]
          Length = 640

 Score =  670 bits (1729), Expect = 0.0,   Method: Composition-based stats.
 Identities = 283/644 (43%), Positives = 431/644 (66%), Gaps = 17/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEII 62
            I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N ++ DL   + E   +EII
Sbjct: 5   MIEIKFPDGSVKEFVKGITLEEIAGSISSSLKKKAVAGKVNDQLYDLRRNIEENAEVEII 64

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +    + + RHS AHI+A+AV+ ++ ++ + +GP+IE+GFYYD D     + ++L +I
Sbjct: 65  TIDSNEGVEIARHSVAHILAQAVKRLYGDINLGVGPVIENGFYYDMDLPSSVNVEDLRKI 124

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M+ II  +    +  +S E+A +LF+   +  K+E+LE+IP+ E+VTLY+QGE+ DL
Sbjct: 125 EKEMRNIIKENISIERVEVSREEAAKLFQEMNDRLKLELLEAIPSGESVTLYKQGEFVDL 184

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG +K F     V+GAYWRGDSN  +L RIYG A+ +Q+EL +YL+F+EE+ 
Sbjct: 185 CRGPHVPSTGYLKAFQLTH-VSGAYWRGDSNNQVLQRIYGVAFFSQKELEEYLHFVEEAA 243

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KR+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R  + + +Y+E+ TP +++
Sbjct: 244 KRNHRKLGNELELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMN 303

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           Q +W++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R
Sbjct: 304 QEVWERSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIR 357

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           + EFG V+R+E SG+L+GL+RVR F QDDAH+F T EQ+ +E   +   I  +YK FGFE
Sbjct: 358 MCEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPEQIEDEIKSVMGQIDYVYKTFGFE 417

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPE  +G D LW+ AE  ++ VL ++           +  G+GAFYGPK ++
Sbjct: 418 Y-EVELSTRPEDSMGDDKLWEQAEAALENVLQSLNY------KYRLNEGDGAFYGPKIDF 470

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+ R  QCGTIQ+DF +P +F+  Y++  +EK  PV+IHRAV GS++RF+ I+IE+
Sbjct: 471 HIKDALNRSHQCGTIQLDFQMPEKFDLNYIDEKNEKKRPVVIHRAVLGSLDRFLAILIEH 530

Query: 542 FKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           F G  P W++P+Q  V  ++++  V+YA E+A+ L    + IE D R+E + YKIRE  +
Sbjct: 531 FGGAFPAWVAPVQVKVIPVSNAVHVQYANEVADKLAQAGVRIERDMRDEKLGYKIREAQM 590

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +KIP +++ GDKE    S+ +R++G   ++ V+L      + +E
Sbjct: 591 QKIPYVLVIGDKEMENGSVNVRKYGEEKSEVVALDVFAASMEEE 634


>gi|170726837|ref|YP_001760863.1| threonyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
 gi|238688661|sp|B1KG61|SYT_SHEWM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|169812184|gb|ACA86768.1| threonyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
          Length = 642

 Score =  670 bits (1729), Expect = 0.0,   Method: Composition-based stats.
 Identities = 286/647 (44%), Positives = 420/647 (64%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP    +T PDGS + F    +  DVA  I   LAK  +A  +NG++ D  D +  +  +
Sbjct: 1   MPV---ITLPDGSKREFATPVSTLDVAADIGPGLAKACIAGRVNGELKDACDIIDTDSEL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   + ++RHSCAH++  A + +WPE ++AIGP+I++GFYYD D +   + +++
Sbjct: 58  SIITAKDEEGVEILRHSCAHLLGHAFKQLWPEAKMAIGPVIDNGFYYDIDLDHKLTQEDI 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M ++   +    K+  S + AR+ FE++ E YK+EIL E+I   +   LY   E
Sbjct: 118 DALEKRMVQLAKTNYIVEKRVGSWQVARDTFEARGETYKMEILDENISKDDQPALYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +    + F KLM VAGAYWRG+S+  ML R+YGTAW  ++ L  +L  L
Sbjct: 178 YVDMCRGPHVPNMKFCQHF-KLMSVAGAYWRGNSDNKMLQRVYGTAWADKKALKVHLNRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW +F  L  ++R+K+ +  Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWSLFLELEKFIRQKLGQYTYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+
Sbjct: 297 LMMDRVLWERSGHWDKYSEAMFT------TNSENREYAIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFG  +RNEPSGSLHGLMRVRGFTQDDAHVFCT++Q+  E      ++   Y+ 
Sbjct: 351 LPLRMAEFGCCHRNEPSGSLHGLMRVRGFTQDDAHVFCTEDQVQQEVSACIKMVYDTYET 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF+ I+VKLSTRPEKR+G D +WD AE  +K  L        + I   +L GEGAFYGP
Sbjct: 411 FGFKDIVVKLSTRPEKRIGDDDMWDRAEEALKQALTA------NDIAYEILPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+D+ LP R  A YV   + +  PVMIHRA+ GS+ERF+GI
Sbjct: 465 KIEFTLHDCLDRAWQCGTVQLDYALPGRLGATYVAEDNSRQTPVMIHRAILGSLERFLGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE + G  P WL+P+QA+V  IT    +Y  E+ N+LK + +    D RNE I +KIRE
Sbjct: 525 LIEEYAGKFPTWLAPMQAVVMNITDKQSDYVDEVVNILKENGIRASKDLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H+++++P +++ GD+E   + + +R        K+ + +    + ++
Sbjct: 585 HTLRRVPYLLVVGDQEMENKEVAVRTRDGVDLGKIQISEFASKIKEQ 631


>gi|126462800|ref|YP_001043914.1| threonyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029]
 gi|166225489|sp|A3PLC6|SYT_RHOS1 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|126104464|gb|ABN77142.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Rhodobacter
           sphaeroides ATCC 17029]
          Length = 646

 Score =  670 bits (1729), Expect = 0.0,   Method: Composition-based stats.
 Identities = 321/650 (49%), Positives = 438/650 (67%), Gaps = 10/650 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           + I LTFPDG  + FP   T ++VA SIS SL KKA++ +++G+  DL  P+  +  I I
Sbjct: 2   AQISLTFPDGKAREFPAGITPAEVAASISTSLGKKAISASVDGRHYDLQWPIETDAKIAI 61

Query: 62  ITPEDP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            T  D  ++L +IRH  AHIMA AVQ +WP+V+V IGP++ +G+YYDFD+E+ F+ ++L 
Sbjct: 62  HTMADEAQALELIRHDLAHIMARAVQELWPDVKVTIGPVVANGWYYDFDREETFTPEDLG 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEK+M+EII        +     +A   +E + E +KVE++++IP  +++ +Y  G W 
Sbjct: 122 AIEKRMKEIINAREAVKTELWERARAIGYYEERGEPFKVELVQAIPEDQSIRMYWHGGWQ 181

Query: 181 DLCRGPHVRSTGQ-VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           DLCRGPH++ TGQ     FKLM VAGAYWRGDS    L RIYG A+ T+ EL  YL+ LE
Sbjct: 182 DLCRGPHLQHTGQVPADAFKLMSVAGAYWRGDSANKQLQRIYGVAFKTRDELKAYLHMLE 241

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQ 298
           E+ KRDHRKL REM+LFH+ E+  G++FWH  GW+I++TL  YMR R  +  Y+EI TPQ
Sbjct: 242 EAAKRDHRKLGREMELFHLQEEAPGMVFWHPNGWQIYRTLEDYMRGRLRQAGYKEIRTPQ 301

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW+ SGHW++Y+ NMF V+  ++  K+ R  ALKPMNCP HV V+N GLKSYR+L
Sbjct: 302 VVDRKLWEASGHWEAYKENMFIVEVEEEHAKEKRINALKPMNCPCHVQVYNQGLKSYRDL 361

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFGS +R E SGS+HGLMRVRGF QDDAH+FCT++Q+ +EC     L+ S+YKD 
Sbjct: 362 PLRLAEFGSCHRYESSGSMHGLMRVRGFVQDDAHIFCTEDQIESECAAFIELLSSVYKDL 421

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+   +KLSTRPE R+GSD  WD  E  ++  +  +  +        +  GEGAFYGPK
Sbjct: 422 GFDSFEIKLSTRPEVRIGSDEAWDKVETALENAIRKVGAA------YEIDPGEGAFYGPK 475

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++ L DAIGR WQCGT QVD NLP+R  A Y+     K  P M+HRA+ GS ERFIGI+
Sbjct: 476 LDFKLTDAIGRKWQCGTFQVDPNLPTRLGAEYIGEDGAKHRPYMLHRAILGSFERFIGIL 535

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IEN+ G LP WL+P Q +V +I S A  Y  E+   L++  +  E D RNE INYK+REH
Sbjct: 536 IENYAGKLPFWLAPRQVVVASIVSDADPYVAEVVAALRARGVRAEADTRNEKINYKVREH 595

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
           S+ K+P+I+  G +E   RS+ +RR G T T+ + L   +  L  ++  P
Sbjct: 596 SVGKVPVILAIGMQEVEARSVSVRRLGETRTESMGLDQVVDQLAADARIP 645


>gi|206974097|ref|ZP_03235015.1| threonyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217959885|ref|YP_002338441.1| threonyl-tRNA synthetase [Bacillus cereus AH187]
 gi|229139078|ref|ZP_04267655.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
 gi|206748253|gb|EDZ59642.1| threonyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217066290|gb|ACJ80540.1| threonyl-tRNA synthetase [Bacillus cereus AH187]
 gi|228644433|gb|EEL00688.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
          Length = 639

 Score =  670 bits (1728), Expect = 0.0,   Method: Composition-based stats.
 Identities = 280/644 (43%), Positives = 431/644 (66%), Gaps = 17/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEII 62
            I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N  + DL   + E   +EI+
Sbjct: 5   MIEIKFPDGSVKEFVKGITLEEIAGSISSSLKKKAVAGKVNDGLYDLRRNIEENAEVEIV 64

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +    + + RHS AHI+A+A++ I+  V + +GP+IE+GFYYD D     + ++L +I
Sbjct: 65  TIDSDEGVEIARHSAAHILAQAIKRIYGNVNLGVGPVIENGFYYDMDLPSSVNVEDLREI 124

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M++II  +    +  +S E+A +LF+   +  K+E+LE+IP++E+VTLY+QGE+ DL
Sbjct: 125 EKEMKKIINENIKIERVEVSREEAAKLFQEMNDRLKLELLEAIPSEESVTLYKQGEFVDL 184

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ STG +K F     V+GAYWRGDSN  +L RIYG A+++Q+EL +YL+F+EE+ 
Sbjct: 185 CRGPHLPSTGYLKAFQLTH-VSGAYWRGDSNNQVLQRIYGVAFSSQKELEEYLHFVEEAA 243

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KR+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R  + + +Y+E+ TP +++
Sbjct: 244 KRNHRKLGSELELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMN 303

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           Q +W++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R
Sbjct: 304 QEVWERSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIR 357

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           + EFG V+R+E SG+L+GL+RVR F QDDAH+F T EQ+ +E   +   I  +YK FGFE
Sbjct: 358 MCEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPEQIEDEIKSVMAQIDYVYKTFGFE 417

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPE  +G D LW+ AE  +  VL ++           +  G+GAFYGPK ++
Sbjct: 418 Y-EVELSTRPEDSMGDDKLWEQAEAALANVLHSLNC------KYRLNEGDGAFYGPKIDF 470

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+ R  QCGTIQ+DF +P +F+  Y++  +EK  PV+IHRAV GS++RF+ I+IE+
Sbjct: 471 HIKDALNRSHQCGTIQLDFQMPEKFDLNYIDEKNEKKRPVVIHRAVLGSLDRFLAILIEH 530

Query: 542 FKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           F G  P W++P+Q  V  ++++  V+YA E+A+ L    + +E D R+E + YKIRE  +
Sbjct: 531 FGGAFPAWVAPVQVKVIPVSNAVHVQYADEVADKLAQAGVRVERDVRDEKLGYKIREAQM 590

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +KIP +++ GDKE    ++ +R++G   ++ V L   +  + +E
Sbjct: 591 QKIPYVLVIGDKEMENGAVNVRKYGEEKSEVVELNGFVESMKEE 634


>gi|87198229|ref|YP_495486.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Novosphingobium
           aromaticivorans DSM 12444]
 gi|123749972|sp|Q2GBX1|SYT_NOVAD RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|87133910|gb|ABD24652.1| Ser-tRNA(Thr) hydrolase [Novosphingobium aromaticivorans DSM 12444]
          Length = 664

 Score =  670 bits (1728), Expect = 0.0,   Method: Composition-based stats.
 Identities = 305/665 (45%), Positives = 433/665 (65%), Gaps = 16/665 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           M   +K+T PDGS++     +T +D+A +I   LAK A+A  ++G++ DL+ P   +  +
Sbjct: 1   MSELLKITLPDGSVREVAPGSTPADIAAAIGPGLAKAALAAKVDGELVDLTRPFTADAQL 60

Query: 60  EIITPEDP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSD 117
            ++T +D   +L + RH  AH++AEAVQ+++P  Q+  GP  +DGFYYDF  K++PF+ +
Sbjct: 61  ALVTAKDEAEALDLARHDYAHVLAEAVQALFPGTQITFGPSTDDGFYYDFAPKDRPFTDE 120

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +L  IE +M++IIA + P  ++  S E+    ++ + E++K E    +P  E +T+Y  G
Sbjct: 121 DLPAIEAEMRKIIAANKPLRREVWSREQLISRWKQQGESFKAEWAAELPENEELTVYWSG 180

Query: 178 E-WFDLCRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
           + W D+CRGPH+ STG++    FKL +V+GAYWRGD    MLSR+YGT W  +++L  +L
Sbjct: 181 DDWLDMCRGPHLPSTGKLDPNAFKLTRVSGAYWRGDQKNAMLSRVYGTGWLNKKQLDAHL 240

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEI 294
             LEE+ KRDHRKL  EMDLFH+ ++  G +FWH KG+ I++ L +YMRR I    Y E+
Sbjct: 241 TRLEEAAKRDHRKLGNEMDLFHLQQEAHGSVFWHPKGYLIWRELEAYMRRAIDGAGYREV 300

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCA----DDT----IKDLRTFALKPMNCPGHVA 346
            TPQV+D   W+QSGHW  YR NMF +       DD       D    ALKPMNCP HV 
Sbjct: 301 KTPQVMDARQWEQSGHWGKYRENMFVIPDEVPNVDDEGPIVSNDADWMALKPMNCPAHVL 360

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           +F  G+KSYRELP+RL E G  +RNEP G+LHGLMRVR FTQDDAH+FC ++Q+ +E   
Sbjct: 361 IFRQGIKSYRELPLRLYENGCCHRNEPHGALHGLMRVRQFTQDDAHIFCREDQIVSEVQA 420

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
              L   IYK FGF   + KL+ RPEKR G++ +WD AE  ++  +     ++++     
Sbjct: 421 FCELADRIYKHFGFTYSI-KLALRPEKRFGTEEMWDKAERELRDAVVRAGLATEEY-GWE 478

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
            L GEGAFY PK E+ L DAIGR WQ GTIQ D  LP R +A Y+    EK  PVM+HRA
Sbjct: 479 ELPGEGAFYAPKLEWHLTDAIGRTWQVGTIQSDRVLPERLDASYIGEDGEKHRPVMLHRA 538

Query: 527 VFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF 586
           +FGS ERFIGI+IE+F G LP+WL+P+QA+V TI S A +YA++    LK+  +  +TD 
Sbjct: 539 IFGSYERFIGILIEHFAGRLPVWLAPVQAVVATIVSDADDYARDALAKLKAAGIRADTDL 598

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           RNE INYK+REHS++K+P +++ G +EA E ++ IR  G    + + L +AI +L  E+ 
Sbjct: 599 RNEKINYKVREHSLQKVPYLLVVGKREAEEGTVAIRILGEQHQKVMPLDEAIALLKGEAT 658

Query: 647 PPDCQ 651
            PD +
Sbjct: 659 APDLR 663


>gi|91793061|ref|YP_562712.1| threonyl-tRNA synthetase [Shewanella denitrificans OS217]
 gi|123060978|sp|Q12NI7|SYT_SHEDO RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|91715063|gb|ABE54989.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Shewanella
           denitrificans OS217]
          Length = 642

 Score =  670 bits (1728), Expect = 0.0,   Method: Composition-based stats.
 Identities = 284/641 (44%), Positives = 415/641 (64%), Gaps = 16/641 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS + F    +  DVA  I   LAK  +A  +NG++ D  D +  +  + IIT +
Sbjct: 4   ITLPDGSKREFVNPVSTLDVAADIGPGLAKACIAGRVNGELKDACDLISTDSDLSIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   + ++RHSCAH++  AV+ +WPE ++AIGP+I++GFYYD D +   +++++  +EK+
Sbjct: 64  DQEGVEILRHSCAHLLGHAVKQMWPEAKMAIGPVIDNGFYYDIDLDHKLTAEDIEALEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M ++   +   +K+ +S  +AR+ F  + E YK+ IL E+I       LY   E+ D+CR
Sbjct: 124 MMDLAKTNYDVVKRVVSWHEARDAFSERGEVYKIAILDENISKDATPALYHHEEYTDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +    + F KLM VAGAYWRG+S+  ML R+YGTAW  ++ L  +L  LEE+ KR
Sbjct: 184 GPHVPNMRFCQNF-KLMSVAGAYWRGNSDNKMLQRVYGTAWADKKALKTHLTRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW +F  L  ++R+K+ +  Y+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWSLFLELEKFIRQKLGQYTYQEVKGPLMMDRA 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWERSGHWDKYSDAMFT------TNSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFG  +RNEPSGSLHGLMRVRGFTQDDAH+FCT +Q+  E      ++   Y  FGFE I
Sbjct: 357 EFGCCHRNEPSGSLHGLMRVRGFTQDDAHIFCTDDQVQKEVSDCIQMVYDTYATFGFENI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPEKR+G D +WD AE  +K  L        + I   +L GEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEKRIGDDDMWDRAEEALKQALIA------NEIEFEILPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+D+ LPSR  A YV   + +  PVMIHRA+ GS+ERF+GI+IE + 
Sbjct: 471 HDCLDRAWQCGTVQLDYALPSRLGATYVAEDNTRQTPVMIHRAILGSLERFLGILIEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+Q +V  IT    +Y Q++  + K   +    D RNE I +KIREH+++++
Sbjct: 531 GKFPTWLAPMQVVVMNITDKQADYVQDVVKIFKEQGIRASFDLRNEKIGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P +++ GD+E   + + +R        K+S+ D    + K+
Sbjct: 591 PYLLVVGDQEMENKEVAVRTRDGIDLGKMSIEDFAKKIHKD 631


>gi|320529200|ref|ZP_08030292.1| threonyl-tRNA synthetase [Selenomonas artemidis F0399]
 gi|320138830|gb|EFW30720.1| threonyl-tRNA synthetase [Selenomonas artemidis F0399]
          Length = 639

 Score =  670 bits (1728), Expect = 0.0,   Method: Composition-based stats.
 Identities = 282/644 (43%), Positives = 404/644 (62%), Gaps = 18/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDP-VREGSIEII 62
            +KLT PDGS++      T  DV + +S SLAKKA+A +++GK  DL  P  ++ + +++
Sbjct: 1   MVKLTLPDGSVREVEYGTTLLDVVKQMSNSLAKKALAASLDGKTVDLMTPATQDAAFQVL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVA--IGPIIEDGFYYDFDKEQPFSSDELA 120
           T ED      +RH+C+HIMA+AV+ ++ +  V   IGP IE+GFYYDFD ++  +  +L 
Sbjct: 61  TFEDAGGRLALRHTCSHIMAQAVKRLYKDCNVQLAIGPAIENGFYYDFDMDRQLTDADLR 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEK+M++I+  +    ++ +   +A   F  K E YKVE++E +P    ++ Y QGE+ 
Sbjct: 121 DIEKEMKKIVKENLKLERREIPRSEAIAYFREKGENYKVELIEDLPEDVTISTYTQGEFT 180

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLC GPHV STG+VK       +AGAYWRG     ML RIYGTA+  Q+EL  YL+ LEE
Sbjct: 181 DLCAGPHVLSTGKVKALRLQ-SIAGAYWRGSEKNKMLQRIYGTAFEKQEELDAYLHMLEE 239

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           +EKRDHRKL RE+DLF + E+G G  F+H  G  +   L++Y R    +  Y EI+TP +
Sbjct: 240 AEKRDHRKLGRELDLFSLHEEGPGFPFFHPNGMILRNELLNYWREVHRRYGYSEISTPVI 299

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           L + LW+ SGHW  YR NM+  +       D   +A+KPMNCPG + V+   L SYR+LP
Sbjct: 300 LSRKLWETSGHWFHYRENMYTTQI------DEEDYAIKPMNCPGCMLVYRSQLHSYRDLP 353

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +RLAE G V+R+E SG+LHGL RVR FTQDDAH+F T EQ+  E     +L   +Y+ FG
Sbjct: 354 LRLAELGLVHRHELSGALHGLFRVRNFTQDDAHLFVTPEQIEGEIQHTIDLFDEVYRTFG 413

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
                 +LSTRP+  +GSD +W+ A + ++  L+         ++  V  G+GAFYGPK 
Sbjct: 414 LSY-KAELSTRPDDSMGSDEMWELATSGLQKALE------NRGLDYIVNEGDGAFYGPKI 466

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           ++ L+D+IGR WQCGTIQ+D +LP +F+  YV    EK  PVM+HR V+GSIERFIGI+I
Sbjct: 467 DFHLRDSIGRTWQCGTIQLDMSLPEKFDLTYVGEDGEKHRPVMLHRVVYGSIERFIGILI 526

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           ENF G  P+W++P+Q  +  IT    EYA+E+   +    + +E D RNE   YKIRE  
Sbjct: 527 ENFAGAFPVWMTPVQVRILPITERHAEYAEELRKRMFDRGIRVEVDNRNEKTGYKIRESQ 586

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +KK P  ++ GD+E    ++ +R++G   +  +S  D I  + K
Sbjct: 587 VKKTPYTLVVGDQEQESGTVALRKYGEKDSTVMSADDFIAFVEK 630


>gi|291563461|emb|CBL42277.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase
           [butyrate-producing bacterium SS3/4]
          Length = 646

 Score =  670 bits (1728), Expect = 0.0,   Method: Composition-based stats.
 Identities = 286/642 (44%), Positives = 407/642 (63%), Gaps = 15/642 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K+T  DGS K +       D+A+ IS  LA+ A    I+G+  DL   V ++ ++ I T
Sbjct: 1   MKVTLKDGSFKEYAQPMAVIDIAKDISEGLARMACVAEIDGEAKDLRTIVDKDCTLNIFT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +DP  LA +RH+ +H+MA+A++ IWPE ++AIGP I DGFYYD D+++P +SD+LA+IE
Sbjct: 61  AKDPEGLAALRHTASHVMAQAIKRIWPETKLAIGPSIADGFYYDIDRDEPVTSDDLAKIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M++II    P  +  L   +A  L + K E YKVE++E +P    ++ Y+QGE+ DLC
Sbjct: 121 AEMKKIIKEALPLERFELPRAEAISLMKEKNEPYKVELIEDLPEDSIISFYKQGEFTDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+ +T +V K FKLM +AGAYWRG     ML+RIY TA+  +++L  Y+  +EE++K
Sbjct: 181 AGPHLMNTKEVGKAFKLMNIAGAYWRGSEKNKMLTRIYATAFAKKEDLDAYVTMMEEAKK 240

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           RDHRKL +E+ LF +++ G G  F+  KG  +  TL+ Y R    K  Y EI+TP +L++
Sbjct: 241 RDHRKLGKELGLFMMSDAGPGFPFFLPKGMVLKNTLLDYWREIHKKAGYVEISTPIILNR 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHWD Y+ NM+       TI D   +A+KPMNCPG V V+    +SYR+LP+R+
Sbjct: 301 SLWETSGHWDHYKNNMYT------TIIDGEDYAIKPMNCPGGVLVYASEPRSYRDLPLRM 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            E G V+R+E SG LHGLMRVR FTQDDAH+F T EQ+ +E   +  LI  +Y  FGF+ 
Sbjct: 355 GELGIVHRHEKSGQLHGLMRVRCFTQDDAHIFMTPEQIRDEIKNVAGLINQVYSLFGFKY 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +GSD  W+ A + ++G LD +       ++  +  G+GAFYGPK ++ 
Sbjct: 415 H-VELSTRPEDSMGSDEDWELATSSLQGALDDLG------LDYVINEGDGAFYGPKIDFH 467

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L DAIGR WQCGTIQ+DF LP RF   Y+ +  EK  P+MIHR  FGSIERFIGI+IE+F
Sbjct: 468 LVDAIGRTWQCGTIQLDFQLPQRFELEYIGADGEKHRPIMIHRVCFGSIERFIGILIEHF 527

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P+Q  V  I+    EYA+ +   L +  +  E D R+E I YKIRE   +K
Sbjct: 528 AGAFPTWLAPVQVKVLPISEKYEEYAKSVKAALDAADIRAEIDLRSEKIGYKIREAQGQK 587

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IP +++ G KE ++ ++ +R           L   I  +  E
Sbjct: 588 IPYMLVVGQKEQADGTVSVRSRFKGDEGAEDLNVFIANIKAE 629


>gi|260582696|ref|ZP_05850484.1| threonyl-tRNA synthetase [Haemophilus influenzae NT127]
 gi|260094262|gb|EEW78162.1| threonyl-tRNA synthetase [Haemophilus influenzae NT127]
          Length = 643

 Score =  670 bits (1728), Expect = 0.0,   Method: Composition-based stats.
 Identities = 293/647 (45%), Positives = 426/647 (65%), Gaps = 16/647 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  +VA+ I   LAK  +A  +NG+  D  D +  + ++EIIT +
Sbjct: 4   ITLPDGSQRQFDRPVSVLEVAQDIGAGLAKATIAGRVNGERRDACDVIEQDATLEIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ ++P+V++AIGP IE+GFYYD D ++  + ++L  IEK+
Sbjct: 64  DEDGLEIIRHSCAHLLGHAIKQLFPDVKMAIGPTIENGFYYDVDLDRSLTQEDLDAIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K+ ++ ++AR+ FE + E YK+ IL E+I       LY   E+ D+CR
Sbjct: 124 MLELAKTNYDVVKKRVTWQEARDTFEKRGEPYKMAILDENIERTATPALYHHLEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +    + F KL KVAGAYWRGDS   ML RIYGTAW  +++L +YL  LEE+ KR
Sbjct: 184 GPHVPNMRFCQHF-KLQKVAGAYWRGDSKNKMLQRIYGTAWADKKQLAEYLTRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQH 303
           DHRK+ + +DL+H+ E+  G++FWH  GW IF+ L +++R K+ + DY+E+  P ++D+ 
Sbjct: 243 DHRKIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW +Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWQNYADLMFT------TQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+ +E      ++  IY  FGF  I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQIESEVTSCIKMVYDIYSTFGFTNI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPE R+GSD +WD      +         + + +   +  GEGAFYGPK E+ L
Sbjct: 417 AVKLSTRPENRIGSDEMWD------RAEAGLAAALAHNGLEYEIQEGEGAFYGPKIEFAL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D +GR+WQCGT+Q+DF LP R +A YV   + +  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 RDCLGREWQCGTVQLDFALPGRLDATYVAEDNSRKTPVMIHRAILGSIERFIGIITEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P QA+V  IT S  +Y Q++A  L    L ++TD RNE + +KIREH+++++
Sbjct: 531 GFFPAWLAPTQAVVMNITDSQADYVQKVAKQLSDVGLRVKTDLRNEKVGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDC 650
           P +++CGDKE +E  + +R          ++ +   IL  +    + 
Sbjct: 591 PYMLVCGDKEIAEGKVAVRTRKGADLGTFTVEEFAEILKNQVRSREL 637


>gi|260219598|emb|CBA26443.1| Threonyl-tRNA synthetase [Curvibacter putative symbiont of Hydra
           magnipapillata]
          Length = 665

 Score =  670 bits (1728), Expect = 0.0,   Method: Composition-based stats.
 Identities = 326/652 (50%), Positives = 437/652 (67%), Gaps = 23/652 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAI--NGK------VCDLSDPV 54
           + I +T PDGS + FP   T ++VA SI   LAK A+A  +   G+      V D S  +
Sbjct: 21  TMIHITLPDGSKREFPGPVTVAEVAASIGTGLAKAALAGKVRAEGESADAAKVVDTSFQM 80

Query: 55  R-EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQP 113
             + ++ IIT +D   L VIRHS AH++A AV+ ++P+ QV IGP+IE GF+YDF  ++P
Sbjct: 81  TADSALSIITAKDADGLEVIRHSTAHLLAYAVKELFPDAQVTIGPVIEHGFFYDFSYKRP 140

Query: 114 FSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTL 173
           F+ ++LA IEKKM E+  +D P +++ L  + A E F+S  E YK EI+ SIPA E+V+L
Sbjct: 141 FTPEDLAAIEKKMTELANKDEPVVRRVLPRDDAVEYFKSLGEQYKAEIIASIPANEDVSL 200

Query: 174 YRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQ 233
           YR+G + DLCRGPHV STG++K F KLMKVAGAYWRGD    ML RIYGTAW T+ EL Q
Sbjct: 201 YREGNFEDLCRGPHVPSTGKLKHF-KLMKVAGAYWRGDHRNEMLQRIYGTAWATKDELQQ 259

Query: 234 YLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYE 292
           +L  LEE+EKRDHRKL RE+DLFHI E   G +FWH KGW ++Q +  YMR+  + + Y 
Sbjct: 260 HLTMLEEAEKRDHRKLGRELDLFHIDEHSPGTVFWHPKGWTLWQGVEQYMRKVYQDNGYL 319

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  PQ++D+ LW+++GHWD YR NMF       T  + R +ALKPMNCPGH+ ++  G+
Sbjct: 320 EVKGPQIIDKSLWEKTGHWDKYRENMFT------TESEKRDYALKPMNCPGHILIYKQGI 373

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
           KSYR+LP+R  EFG  +RNEPSG LHG+MRVR FTQDD H+FCT++Q+ +E      L+ 
Sbjct: 374 KSYRDLPLRFGEFGQCHRNEPSGGLHGIMRVRAFTQDDGHIFCTEDQIQDEVKAFTTLLQ 433

Query: 413 SIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
            +YKDFGF  I+ KLSTRPEKR+G++  WD AEN +   L           +   L GEG
Sbjct: 434 KVYKDFGFTNIIYKLSTRPEKRIGTEEGWDRAENALAEGLRASGC------DFEYLPGEG 487

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           AFYGPK EY LKDA+GR WQCGTIQVD NLP R +A +V     +  PVM+HRA+ GS+E
Sbjct: 488 AFYGPKIEYTLKDALGRPWQCGTIQVDPNLPERLDAEFVGEDGSRHRPVMLHRAIVGSLE 547

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
           RFIGI+IE   G LP WL+P+Q  V  IT +  +YA+ +A  L++  L +  D RNE I 
Sbjct: 548 RFIGILIEESAGALPAWLAPVQVAVLNITDAQADYARSVAKTLQNQGLRVHLDLRNEKIT 607

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           YKIREHS++K+P +++ GDKE +  ++ +R  G      + L   I  +T +
Sbjct: 608 YKIREHSMQKLPYLVVIGDKEMAAGAVAVRARGGQDLGAMPLESFIERITAD 659


>gi|319426373|gb|ADV54447.1| threonyl-tRNA synthetase [Shewanella putrefaciens 200]
          Length = 642

 Score =  670 bits (1728), Expect = 0.0,   Method: Composition-based stats.
 Identities = 290/647 (44%), Positives = 418/647 (64%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS + F    +  DVA  I   LAK  +A  +NG++ D  D +  +  +
Sbjct: 1   MPV---ITLPDGSKREFAHAVSTLDVAADIGPGLAKACIAGRVNGELKDACDLIETDAEL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   + ++RHSCAH++  A++ +WPE ++AIGP+I++GFYYD D E   + D++
Sbjct: 58  SIITAKDEEGVEILRHSCAHLLGHAIKQMWPETKMAIGPVIDNGFYYDIDLEHKLTQDDI 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M ++   +   +K+ +S ++AR+ F ++ E YK+ IL E+I       LY   E
Sbjct: 118 EALEKRMLQLAKTNYDVVKRVVSWQEARDTFAARGEEYKIAILDENISKDATPALYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +    + F KLM +AGAYWRG+S   ML RIYGTAW  ++ L+ +L  L
Sbjct: 178 YTDMCRGPHVPNMRFCQHF-KLMSIAGAYWRGNSENKMLQRIYGTAWADKKALSTHLTRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF  L  ++RRK+ +  Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWSIFLELERFIRRKLNQYTYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+
Sbjct: 297 LMMDRVLWERSGHWDKYSEAMFT------TSSENREYAIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFG  +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+  E      ++   Y  
Sbjct: 351 LPLRMAEFGCCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQVQEEVSACIQMVYDTYST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFE I+VKLSTRPEKR+G DA+WD AE  +K  L        + I   +L GEGAFYGP
Sbjct: 411 FGFENIVVKLSTRPEKRIGDDAMWDRAEEALKQALRA------NNIEFTLLPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+D+ LP+R  A YV   + +  PVMIHRA+ GS+ERF+GI
Sbjct: 465 KIEFTLHDCLDRAWQCGTVQLDYALPNRLGATYVAEDNSRQTPVMIHRAILGSLERFLGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE + G  P WL+P+Q +V  IT    +Y QEI    K   +    D RNE I +KIRE
Sbjct: 525 LIEEYAGRFPTWLAPMQVVVMNITDKQADYVQEIVKFFKEQGIRASFDLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H+++++P +++ GD+E   + + +R        K+ L D    + ++
Sbjct: 585 HTLRRVPYLLVVGDQEMENKEVAVRTRDGIDLGKMRLEDFATKIHQQ 631


>gi|330720856|gb|EGG99050.1| Threonyl-tRNA synthetase [gamma proteobacterium IMCC2047]
          Length = 639

 Score =  670 bits (1728), Expect = 0.0,   Method: Composition-based stats.
 Identities = 299/647 (46%), Positives = 429/647 (66%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
           MP    +T PDGS ++F    +  +VA  I   LAK  V   +NG+  D+ D + + + +
Sbjct: 1   MPV---ITLPDGSQRSFENPVSVFEVASDIGPGLAKATVGATVNGEPADVHDVISDDAEL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            + TP+D   L +IRHSCAH++  A++ +WP+ ++AIGP+IE+GFYYD D +   + +++
Sbjct: 58  VLFTPKDDAGLEIIRHSCAHLLGHAIKQLWPDTKMAIGPVIENGFYYDVDLDHRITDEDM 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE-SIPAKENVTLYRQGE 178
             +EK+M+E++      +K+ +S   A E+F  + E+YK++IL+  I   ++  LY   E
Sbjct: 118 ETLEKRMKELVKTQYDVIKKKVSWHDALEVFAERGESYKLQILQQDIDQSDSPGLYYHQE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +    + F KLM+V+GAYWRGDS+  ML RIYGTA+  +++L +YL FL
Sbjct: 178 YVDMCRGPHVPNMRFCEHF-KLMRVSGAYWRGDSDNKMLQRIYGTAFADKKQLKKYLNFL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTP 297
           EE+ KRDHRKLA+++DLFH+ E+  G++FWH KGW I+QT+  YMR+ +  + Y+EI TP
Sbjct: 237 EEASKRDHRKLAKKLDLFHLQEEAPGMVFWHAKGWSIYQTVEQYMRKVQHDNGYQEIKTP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           Q++D  LW++SGH D +   MF       +  + + +A+KPMNCP HV VFN GL+SYR+
Sbjct: 297 QLVDFSLWERSGHADKFGDEMF------SSHSENKDYAVKPMNCPCHVQVFNQGLRSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+RLAEFG  +RNEPSG+L GLMRVRGF QDDAH+FC + Q+ +E     +L+ S+Y+D
Sbjct: 351 LPLRLAEFGCCHRNEPSGTLQGLMRVRGFVQDDAHIFCAESQIQDEVASFIDLLYSVYQD 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF+ ++VKLSTRPEKRVGSD +WD AE  ++  LD         I   +  GEGAFYGP
Sbjct: 411 FGFDDVLVKLSTRPEKRVGSDEVWDKAEEALQLALD------NKGIAWELQPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L+D +GR WQCGTIQVDF++P R +A YV     +  PVM+HRA+ GS ERFIGI
Sbjct: 465 KIEFSLRDCLGRVWQCGTIQVDFSMPGRLDAQYVAEDGSRQVPVMLHRAILGSFERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE+F G  P WL+P QA +  IT S  EY + +   L++    + +D RNE I +KIRE
Sbjct: 525 LIEHFAGAFPAWLAPEQAAIVNITDSQAEYCRNVEKTLRNKGFRVFSDLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           HSI+KIP +++ GDKE     I +R         +S+      LT +
Sbjct: 585 HSIQKIPYVLVVGDKEMEAGQIAVRTQKGEDLGSMSIEAFCERLTTD 631


>gi|225181661|ref|ZP_03735101.1| threonyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
 gi|225167642|gb|EEG76453.1| threonyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
          Length = 636

 Score =  670 bits (1728), Expect = 0.0,   Method: Composition-based stats.
 Identities = 272/641 (42%), Positives = 401/641 (62%), Gaps = 16/641 (2%)

Query: 6   KLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITP 64
           K+T PDGS++ +    T SDV   +   L K+AVA  +NG V DL+  +  +  +  +T 
Sbjct: 4   KVTLPDGSVREYTDGTTVSDVVADLGGRLKKEAVAAKVNGVVRDLTYTLTEDAEVRFLTF 63

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
            D     V RH+ +HI+A AV+ ++  V++ IGP I+DGFYYDFD  + F   +L +IEK
Sbjct: 64  ADDEGAEVYRHTSSHILALAVKRLFKGVKLGIGPAIKDGFYYDFDYSESFVPADLEKIEK 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
           +M++II    P  +  L  ++A E F    E YKVE+++ +P    ++ YR GE+ DLC 
Sbjct: 124 EMEKIIKESLPLERFELERQEAVEYFNKLGEDYKVELIQDLPEDAVISCYRCGEFVDLCA 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPH+ +TG+VK   KL+ +AGAYWRG  N PML RIYGT++  + +L +YL+ LEE++KR
Sbjct: 184 GPHLPTTGRVK-AVKLLNLAGAYWRGSENNPMLQRIYGTSFPKRSQLDEYLHRLEEAKKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQH 303
           DHRKL RE+DLF I ++G G    H +G  I   L  + R + +   Y+EI TP +L++ 
Sbjct: 243 DHRKLGRELDLFSIQDEGPGFPLLHPRGMIIRNALEEFWREEHRKAGYDEIKTPIILNRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SGHWD Y+ NM+  K       D + F++KPMNCPG + V+   + SYR+LPVR+ 
Sbjct: 303 LWERSGHWDHYQENMYFTKI------DEQDFSVKPMNCPGSMLVYKTKMHSYRDLPVRMG 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           E G V+R+E SG+LHG+MRVR FTQDDAH+F    Q+  E  K+  L   +Y  FGF+  
Sbjct: 357 ELGLVHRHELSGTLHGMMRVRAFTQDDAHIFMLPSQIKEEVAKVIELTDRVYNVFGFDYH 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            V+LST+PEK +GSD +WD A N ++ VL+      +  +   +  G+GAFYGPK ++ L
Sbjct: 417 -VELSTKPEKAMGSDEMWDVATNALREVLE------ERGMQFVINEGDGAFYGPKIDFHL 469

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D+IGR WQCGTIQ+DF +P +F+  YV    +K  P +IHR ++GSIERF+ ++IE+F 
Sbjct: 470 QDSIGRTWQCGTIQLDFQMPEKFDIHYVGEDGQKHRPAVIHRVIYGSIERFMAVLIEHFA 529

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P+WL+P Q +V  IT    +YAQ +    +   +  E D RNE I YKIRE  ++K+
Sbjct: 530 GAFPVWLAPQQVVVLPITDKHHQYAQTLVERFREAGVRAEADVRNEKIGYKIREAQVQKV 589

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P +++ GDKE     + +R   +     + +   +  +T E
Sbjct: 590 PYMLVVGDKEMEAGQVSVRERAAGDVGSMEVDAFLAKITAE 630


>gi|167758905|ref|ZP_02431032.1| hypothetical protein CLOSCI_01251 [Clostridium scindens ATCC 35704]
 gi|167663312|gb|EDS07442.1| hypothetical protein CLOSCI_01251 [Clostridium scindens ATCC 35704]
          Length = 641

 Score =  670 bits (1728), Expect = 0.0,   Method: Composition-based stats.
 Identities = 268/642 (41%), Positives = 401/642 (62%), Gaps = 16/642 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K+T  DGS K +    +  D+A+ IS  LA+ A    I+G + DL   V ++  +E++T
Sbjct: 1   MKITLKDGSEKGYERSMSVLDIAKDISEGLARAATCAKIDGDIVDLRTDVSKDCELELLT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +         H+ +HIMA+A++ ++PE ++AIGP I++GFYYD D+E PF +++L +IE
Sbjct: 61  FDSEDGRGAFWHTTSHIMAQAIKRLYPETKLAIGPSIDNGFYYDLDRETPFVAEDLEKIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M++I+    P  +   + E+A   F+   E YKVE++E +P  E ++ Y+QGE+ DLC
Sbjct: 121 AEMKKIVKEALPIERFTKTREEAIAYFKENDEPYKVELVEDLPEGEEISFYKQGEFVDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+ ST  VK F KL  +AGAYWRG     ML+RIYG ++  + +L +YL+ +EE++K
Sbjct: 181 AGPHLMSTKAVKAF-KLTSLAGAYWRGSEKNKMLTRIYGISYPKKADLEEYLHMMEEAKK 239

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           RDHRKL RE+ LF + ++G G  F+  KG  +  TL+ Y R    ++ Y E++TP +L +
Sbjct: 240 RDHRKLGRELGLFMMCDEGPGFPFFLPKGMVLKNTLLDYWRELHKENGYVEVSTPIILSR 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
           HLW+ SGHWD Y+ NM+          D   +A+KPMNCPG + V+    +SY++LP+R+
Sbjct: 300 HLWENSGHWDHYKDNMYTTMI------DEEDYAVKPMNCPGGMLVYKSEPRSYKDLPLRM 353

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            E G V+R+E SG+LHGL RVR FTQDDAH+F T EQ+ +E   +  LI  IY  FGF+ 
Sbjct: 354 GELGLVHRHEKSGALHGLFRVRCFTQDDAHIFMTPEQIRDEIKGVARLIDEIYSLFGFKY 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRP+  +GSD  W+ A   ++G LD +       ++  V  G+GAFYGPK ++ 
Sbjct: 414 H-VELSTRPDNSMGSDEDWEMATEGLRGALDDLG------LDYMVNEGDGAFYGPKIDFH 466

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+D+IGR WQCGTIQ+D  +P RF+  Y  +  EK  P+MIHR  FGSIERFIGI+IE+F
Sbjct: 467 LEDSIGRTWQCGTIQLDMQMPQRFDLEYTGADGEKHRPIMIHRVAFGSIERFIGILIEHF 526

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P+Q  V  I+   +EY +++   L+   +  E D R E I YKIRE  + K
Sbjct: 527 AGAFPTWLAPVQVKVLPISEKHLEYGKKVLEQLEEAGIRAELDERAEKIGYKIREAQMNK 586

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IP +++ G KE  +  + +R   +    +  +   I  + +E
Sbjct: 587 IPYMLVVGAKEEEQNLVSVRSRFAGDEGQKDIASFIDAIKEE 628


>gi|16273277|ref|NP_439518.1| threonyl-tRNA synthetase [Haemophilus influenzae Rd KW20]
 gi|260580800|ref|ZP_05848626.1| threonyl-tRNA synthetase [Haemophilus influenzae RdAW]
 gi|1174548|sp|P43014|SYT_HAEIN RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|1574199|gb|AAC23014.1| threonyl-tRNA synthetase (thrS) [Haemophilus influenzae Rd KW20]
 gi|260092617|gb|EEW76554.1| threonyl-tRNA synthetase [Haemophilus influenzae RdAW]
          Length = 643

 Score =  669 bits (1727), Expect = 0.0,   Method: Composition-based stats.
 Identities = 291/648 (44%), Positives = 426/648 (65%), Gaps = 16/648 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  +VA+ I   LAK  +A  +NG+  D    +  + ++EIIT +
Sbjct: 4   ITLPDGSQRQFDRPVSVLEVAQDIGAGLAKATIAGRVNGERRDACYVIEQDATLEIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ ++P+V++AIGP IE+GFYYD D ++  + +++  IEK+
Sbjct: 64  DEDGLEIIRHSCAHLLGHAIKQLFPDVKMAIGPTIENGFYYDVDLDRSLTQEDIDAIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K+ ++ ++AR+ FE + E YK+ IL E+I       LY   E+ D+CR
Sbjct: 124 MLELAKTNYDVVKKRVTWQEARDTFEKRGEPYKMAILDENIERTATPALYHHLEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +    + F KL KVAGAYWRGDS   ML RIYGTAW  +++L +YL  LEE+ KR
Sbjct: 184 GPHVPNMRFCQHF-KLQKVAGAYWRGDSKNKMLQRIYGTAWADKKQLAEYLTRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQH 303
           DHRK+ + +DL+H+ E+  G++FWH  GW IF+ L +++R K+ + DY+E+  P ++D+ 
Sbjct: 243 DHRKIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW +Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWQNYADLMFT------TQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+ +E      ++  IY  FGF  I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQIESEVTSCIKMVYDIYSTFGFTNI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPE R+GSD +WD      +         + + +   +  GEGAFYGPK E+ L
Sbjct: 417 AVKLSTRPENRIGSDEMWD------RAEAGLAAALAHNGLEYEIQEGEGAFYGPKIEFAL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D +GR+WQCGT+Q+DF LP R +A YV   + +  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 RDCLGREWQCGTVQLDFALPGRLDATYVAEDNSRKTPVMIHRAILGSIERFIGIITEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P QA+V  IT S  +Y Q++A  L    L ++TD RNE + +KIREH+++++
Sbjct: 531 GFFPAWLAPTQAVVMNITDSQADYVQKVAKQLSDVGLRVKTDLRNEKVGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           P +++CGDKE +E  + +R          ++ +   IL  +    + +
Sbjct: 591 PYMLVCGDKEIAEGKVAVRTRKGADLGTFTVEEFAEILKNQVRSRELK 638


>gi|126174365|ref|YP_001050514.1| threonyl-tRNA synthetase [Shewanella baltica OS155]
 gi|153000743|ref|YP_001366424.1| threonyl-tRNA synthetase [Shewanella baltica OS185]
 gi|217973356|ref|YP_002358107.1| threonyl-tRNA synthetase [Shewanella baltica OS223]
 gi|166225497|sp|A3D4I2|SYT_SHEB5 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|166225498|sp|A6WNH2|SYT_SHEB8 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|254783536|sp|B8EES6|SYT_SHEB2 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|125997570|gb|ABN61645.1| threonyl-tRNA synthetase [Shewanella baltica OS155]
 gi|151365361|gb|ABS08361.1| threonyl-tRNA synthetase [Shewanella baltica OS185]
 gi|217498491|gb|ACK46684.1| threonyl-tRNA synthetase [Shewanella baltica OS223]
          Length = 642

 Score =  669 bits (1727), Expect = 0.0,   Method: Composition-based stats.
 Identities = 289/647 (44%), Positives = 416/647 (64%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS + F    +  DVA  I   LAK  +A  +NG++ D  D +  +  +
Sbjct: 1   MPV---ITLPDGSKREFAHAVSTLDVAADIGPGLAKACIAGRVNGELKDACDLIETDAEL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   + ++RHSCAH++  A++ +WPE ++AIGP+I++GFYYD D E   + D++
Sbjct: 58  SIITAKDEEGVEILRHSCAHLLGHAIKQMWPETKMAIGPVIDNGFYYDIDLEHKLTQDDI 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M ++   +   +K+ +S ++AR+ F ++ E YK+ IL E+I       LY   E
Sbjct: 118 DALEKRMLQLAKTNYDVVKRVVSWQEARDTFAARGEDYKIAILDENISKDATPALYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +    + F KLM +AGAYWRG+S   ML RIYGTAW  ++ L+ +L  L
Sbjct: 178 YTDMCRGPHVPNMRFCQHF-KLMSIAGAYWRGNSENKMLQRIYGTAWADKKALSTHLTRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF  L  ++RRK+ +  Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWSIFLELERFIRRKLNQYTYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+
Sbjct: 297 LMMDRVLWERSGHWDKYSEAMFT------TSSENREYAIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFG  +RNEPSGSLHGLMRVRGFTQDDAH+FCT  Q+  E      ++   Y  
Sbjct: 351 LPLRMAEFGCCHRNEPSGSLHGLMRVRGFTQDDAHIFCTDSQVQEEVSACIQMVYDTYAT 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFE I+VKLSTRPEKR+G DA+WD AE  +K  L        + I   +L GEGAFYGP
Sbjct: 411 FGFENIVVKLSTRPEKRIGDDAMWDRAEEALKQALRD------NNIEFTILPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+D+ LPSR  A YV   + +  PVMIHRA+ GS+ERF+GI
Sbjct: 465 KIEFTLHDCLDRAWQCGTVQLDYALPSRLGATYVAEDNSRQTPVMIHRAILGSLERFLGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE + G  P WL+P+Q +V  IT    +Y +E+    K   +    D RNE I +KIRE
Sbjct: 525 LIEEYAGRFPTWLAPMQVVVMNITDKQADYVEEVVKFFKEQGIRASFDLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H+++++P +++ GD+E   + + +R        K+ L D    + ++
Sbjct: 585 HTLRRVPYLLVVGDQEMENKEVAVRTRDGIDLGKMRLEDFATKIHQQ 631


>gi|315126513|ref|YP_004068516.1| threonyl-tRNA synthetase [Pseudoalteromonas sp. SM9913]
 gi|315015027|gb|ADT68365.1| threonyl-tRNA synthetase [Pseudoalteromonas sp. SM9913]
          Length = 636

 Score =  669 bits (1727), Expect = 0.0,   Method: Composition-based stats.
 Identities = 302/647 (46%), Positives = 422/647 (65%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS ++F    +  DVA  I   LAK  +A  +NG+  D  D +  +  +
Sbjct: 1   MPV---ITLPDGSQRSFENPVSTLDVANDIGPGLAKATIAGRVNGERVDACDLISADSRL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT +D   L +IRHSCAH++  AV+ ++P+ ++AIGP I++GFYYD D E   S D+L
Sbjct: 58  EIITAKDDDGLEIIRHSCAHLIGHAVKQLFPDAKMAIGPTIDNGFYYDIDMEHSLSQDDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             IEK+M ++   +   +K+ +S ++AR+ F ++ E YK+EIL E+I   +   LY   E
Sbjct: 118 DAIEKRMLQLAKTNYDVVKKTVSWQEARDTFAARGETYKIEILDENIAQDDRPGLYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +    + F K+MKVAGAYWRGDS   ML RIYGTAW  +++L  YL  L
Sbjct: 178 YVDMCRGPHVPNMKFCQNF-KIMKVAGAYWRGDSENKMLQRIYGTAWGDKKQLKAYLKRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+EKRDHR++ + +DL+H  E+  G++FWH  GW I++ L  ++R K+++  YEE+  P
Sbjct: 237 EEAEKRDHRRIGKALDLWHWQEEAPGMVFWHNDGWSIYRELEEFVREKLREYQYEEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW++SGHW+ Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+
Sbjct: 297 MMMDRSLWEKSGHWEKYSEAMFT------TESEKREYAIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFG  +RNEPSG+LHGLMRVRGFTQDDAHVFCT+EQ+ +E      ++   Y+ 
Sbjct: 351 LPLRMAEFGCCHRNEPSGALHGLMRVRGFTQDDAHVFCTEEQIMDEVSACIKMVYDTYET 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI+VKLSTRPE+R+G D +WD AE  +   L        + I    L GEGAFYGP
Sbjct: 411 FGFEKIVVKLSTRPEQRIGEDEMWDKAELALADALKA------NDIEFDYLPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF LP R  A YV  ++E+  PVMIHRA+ GSIERFIGI
Sbjct: 465 KIEFTLYDCLDRAWQCGTVQLDFALPGRLGATYVAENNERRTPVMIHRAILGSIERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E + G  P WL+P Q ++  IT     Y QEI   L    +    D RNE I +KIRE
Sbjct: 525 LTEEYAGLFPTWLAPKQVVIMNITDKQAPYVQEIVQKLNKLGIRAAADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H++K+IP +++ GDKE  ++ + +R        K ++ D I  +++E
Sbjct: 585 HTLKRIPYLLVVGDKEVEQQEVAVRTRTGEDLGKFNVDDFIAKISEE 631


>gi|303229391|ref|ZP_07316181.1| threonine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
 gi|302515927|gb|EFL57879.1| threonine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
          Length = 636

 Score =  669 bits (1727), Expect = 0.0,   Method: Composition-based stats.
 Identities = 284/644 (44%), Positives = 415/644 (64%), Gaps = 16/644 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEI 61
           +D+K+  PDGS K +    T  +  + +S SLAKK +A  +NG++ DL + + +GS +  
Sbjct: 2   ADVKIILPDGSAKEYAAGTTLGEAVKKLSNSLAKKVLAANVNGELTDLREELVDGSEVAF 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +T E+      +RH+ +H+MA+AV+ +WPE ++AIGP I+ GFYYD D E   + ++L +
Sbjct: 62  LTFEEDGGKHTLRHTASHVMAQAVKRLWPEAKLAIGPAIDKGFYYDIDMEHTLTPEDLTK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK+M  I+  + P  K  +S ++A E F+SK E YKVE++E +P    ++ Y QG++ D
Sbjct: 122 IEKEMSRIVKENLPITKSVMSRQEAIEFFKSKNEDYKVELIEDLPEDAVISCYAQGDFVD 181

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LC GPHV STG+VK F KL  +AGAYWRGD    ML RIYGTA+  ++EL  YL+ LEE+
Sbjct: 182 LCAGPHVASTGKVKAF-KLQSIAGAYWRGDEKNKMLQRIYGTAFEKKEELDAYLHMLEEA 240

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
            KRDHRKL +E+ LF I E+G G  F+  KG  +   L ++ R    D +Y+EI TP +L
Sbjct: 241 AKRDHRKLGKELGLFVIKEEGPGFPFFLPKGMALRNELENFWREVHHDFEYDEIRTPIIL 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++HLW+ SGHWD YR NM+       TI D   +A+KPMNCPG + V+ + + SYR+LP+
Sbjct: 301 NKHLWETSGHWDHYRENMYT------TIIDDEEYAIKPMNCPGGILVYQNEMHSYRDLPL 354

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R AE G V+R+E SG+LHGL RVR FTQDDAHVF   EQM +E +K+  L   IY  FG 
Sbjct: 355 RYAELGLVHRHELSGALHGLFRVRAFTQDDAHVFMLPEQMQSELMKVIELFDRIYSQFGL 414

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           +   V+LST+P+  +G DA+W+ A   ++  ++         I+  +  G+GAFYGPK +
Sbjct: 415 KYH-VELSTKPDNAMGDDAIWEAATEALRNAIEA------KGIDYVINPGDGAFYGPKLD 467

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           Y ++D++GR WQCGTIQ+D NLP RFN  Y+    +K   +MIHRA FGS+ERFIGI+ E
Sbjct: 468 YHIEDSLGRTWQCGTIQLDMNLPERFNVEYIGEDGQKHRTIMIHRACFGSMERFIGILTE 527

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           ++ G  P W++P+Q  V  I+   VEYA ++A  ++  ++ +E D RNE I YKIR+  +
Sbjct: 528 HYAGAFPTWMAPVQVKVLPISEKHVEYANQLAKQMRHDYVRVEVDDRNEKIGYKIRQAQM 587

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +K+P +++ GDKE  + S+ +R+ G      V   +    +  E
Sbjct: 588 EKVPYMLVVGDKEMEDNSVNVRKHGGDELGTVPFDEFFNSIKIE 631


>gi|160875442|ref|YP_001554758.1| threonyl-tRNA synthetase [Shewanella baltica OS195]
 gi|189083621|sp|A9L2Q9|SYT_SHEB9 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|160860964|gb|ABX49498.1| threonyl-tRNA synthetase [Shewanella baltica OS195]
 gi|315267632|gb|ADT94485.1| threonyl-tRNA synthetase [Shewanella baltica OS678]
          Length = 642

 Score =  669 bits (1727), Expect = 0.0,   Method: Composition-based stats.
 Identities = 289/647 (44%), Positives = 416/647 (64%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS + F    +  DVA  I   LAK  +A  +NG++ D  D +  +  +
Sbjct: 1   MPV---ITLPDGSKREFAHAVSTLDVAADIGPGLAKACIAGRVNGELKDACDLIETDAEL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   + ++RHSCAH++  A++ +WPE ++AIGP+I++GFYYD D E   + D++
Sbjct: 58  SIITAKDEEGVEILRHSCAHLLGHAIKQMWPETKMAIGPVIDNGFYYDIDLEHKLTQDDI 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M ++   +   +K+ +S ++AR+ F ++ E YK+ IL E+I       LY   E
Sbjct: 118 DALEKRMLQLAKTNYDVVKRVVSWQEARDAFAARGEDYKIAILDENISKDATPALYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +    + F KLM +AGAYWRG+S   ML RIYGTAW  ++ L+ +L  L
Sbjct: 178 YTDMCRGPHVPNMRFCQHF-KLMSIAGAYWRGNSENKMLQRIYGTAWADKKALSTHLTRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF  L  ++RRK+ +  Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWSIFLELERFIRRKLNQYTYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+
Sbjct: 297 LMMDRVLWERSGHWDKYSEAMFT------TSSENREYAIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFG  +RNEPSGSLHGLMRVRGFTQDDAH+FCT  Q+  E      ++   Y  
Sbjct: 351 LPLRMAEFGCCHRNEPSGSLHGLMRVRGFTQDDAHIFCTDSQVQEEVSACIQMVYDTYAT 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFE I+VKLSTRPEKR+G DA+WD AE  +K  L        + I   +L GEGAFYGP
Sbjct: 411 FGFENIVVKLSTRPEKRIGDDAMWDRAEEALKQALRD------NNIEFTILPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+D+ LPSR  A YV   + +  PVMIHRA+ GS+ERF+GI
Sbjct: 465 KIEFTLHDCLDRAWQCGTVQLDYALPSRLGATYVAEDNSRQTPVMIHRAILGSLERFLGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE + G  P WL+P+Q +V  IT    +Y +E+    K   +    D RNE I +KIRE
Sbjct: 525 LIEEYAGRFPTWLAPMQVVVMNITDKQADYVEEVVKFFKEQGIRASFDLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H+++++P +++ GD+E   + + +R        K+ L D    + ++
Sbjct: 585 HTLRRVPYLLVVGDQEMENKEVAVRTRDGIDLGKMRLEDFATKIHQQ 631


>gi|299535482|ref|ZP_07048804.1| threonyl-tRNA synthetase 1 [Lysinibacillus fusiformis ZC1]
 gi|298729243|gb|EFI69796.1| threonyl-tRNA synthetase 1 [Lysinibacillus fusiformis ZC1]
          Length = 643

 Score =  669 bits (1727), Expect = 0.0,   Method: Composition-based stats.
 Identities = 263/655 (40%), Positives = 410/655 (62%), Gaps = 20/655 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           M   IKLTFPDG++K F    +  DVA SIS  L KKA A  ING + DL  P+  + +I
Sbjct: 1   MSEMIKLTFPDGAVKEFAKGTSTDDVALSISPGLRKKAYAGKINGVLVDLKTPIEEDATI 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D  +L ++RHS AH+ A+A++ ++P+ ++ IGP+IE GFYYD D   P ++++L
Sbjct: 61  AIITQDDEEALEILRHSTAHLTAQAIKRLFPDAKLGIGPVIEGGFYYDIDSPTPITAEDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEK+M++IIA +    ++ +S  +A+ L+E   + YK+E+LE+IPA E V++Y QGE+
Sbjct: 121 PAIEKEMKKIIAENLEVERKNVSRAEAQALYEEIGDEYKLELLEAIPADEQVSIYYQGEF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRG HV STG++++F KL+ +AGAYWRG+S+  ML RIYGTA+  ++EL  +L  LE
Sbjct: 181 FDLCRGIHVPSTGKLREF-KLLSLAGAYWRGNSDNKMLQRIYGTAFFKKEELKHHLQMLE 239

Query: 240 ESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTP 297
           E+++RDHRK+ +E++LF  ++    G+  W   G  I + +  Y+  +++   Y+ + TP
Sbjct: 240 EAKERDHRKIGKELELFTTSQKVGQGLPLWLPNGATIRRVIERYIVDKELSLGYKHVYTP 299

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +  + L+Q SGHWD Y+ ++F     D+      T  ++PMNCP H+ V+ + + SYR 
Sbjct: 300 VLGSKELYQTSGHWDHYQDSIFPPMEMDN-----ETLIMRPMNCPHHMMVYKNSMHSYRN 354

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AE G+++R E SG++ GL RVRG T +DAH+F   +Q+  E  K+  LI+ +YKD
Sbjct: 355 LPLRIAELGTMHRYEMSGAVSGLQRVRGMTLNDAHIFVRPDQIKAEFQKVVQLILEVYKD 414

Query: 418 FGFEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           F       +LS R      K    DA+W+ A++++K  +D +       ++     GE A
Sbjct: 415 FDLHDYSFRLSYRDPADTEKYFDDDAMWEKAQSMLKEAMDELG------LDYFEAEGEAA 468

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  +K AIG++    T+Q+DF LP RF+  YV    +   PV+IHR V  ++ER
Sbjct: 469 FYGPKLDVQVKTAIGKEETLSTVQLDFLLPERFDLTYVGEDGKPHRPVVIHRGVVSTMER 528

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETIN 592
           F+  +IE +KG  P WL+P+Q  V  +++    +YA++I   L +  L +E D R E + 
Sbjct: 529 FVAFLIEEYKGAFPTWLAPVQVEVIPVSNEAHFDYAKQIEEQLTAAGLRVEMDDREEKLG 588

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLP 647
           YKIRE  +KKIP +++ GDKE     + +RR+GS  ++ +S  D +  +  E   
Sbjct: 589 YKIREAQMKKIPYMLVIGDKEVEANGVNVRRYGSKDSETISFEDFLSTIKTEITK 643


>gi|145629552|ref|ZP_01785350.1| threonyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
 gi|145632888|ref|ZP_01788621.1| threonyl-tRNA synthetase [Haemophilus influenzae 3655]
 gi|145639038|ref|ZP_01794646.1| threonyl-tRNA synthetase [Haemophilus influenzae PittII]
 gi|145641382|ref|ZP_01796961.1| threonyl-tRNA synthetase [Haemophilus influenzae R3021]
 gi|144978395|gb|EDJ88159.1| threonyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
 gi|144986544|gb|EDJ93110.1| threonyl-tRNA synthetase [Haemophilus influenzae 3655]
 gi|145272010|gb|EDK11919.1| threonyl-tRNA synthetase [Haemophilus influenzae PittII]
 gi|145273925|gb|EDK13792.1| threonyl-tRNA synthetase [Haemophilus influenzae 22.4-21]
 gi|309750996|gb|ADO80980.1| Threonyl-tRNA synthetase [Haemophilus influenzae R2866]
          Length = 643

 Score =  669 bits (1727), Expect = 0.0,   Method: Composition-based stats.
 Identities = 292/648 (45%), Positives = 427/648 (65%), Gaps = 16/648 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  +VA+ I   LAK  +A  +NG+  D  D +  + ++EIIT +
Sbjct: 4   ITLPDGSQRQFDRPVSVLEVAQDIGAGLAKATIAGRVNGERRDACDVIEQDATLEIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ ++P+V++AIGP IE+GFYYD D ++  + +++  IEK+
Sbjct: 64  DEDGLEIIRHSCAHLLGHAIKQLFPDVKMAIGPTIENGFYYDVDLDRSLTQEDIDAIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K+ ++ ++AR+ FE + E YK+ IL E+I       LY   E+ D+CR
Sbjct: 124 MLELAKTNYDVVKKRVTWQEARDTFEKRGEPYKMAILDENIERTATPALYHHLEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +    + F KL KVAGAYWRGDS   ML RIYGTAW  +++L +YL  LEE+ KR
Sbjct: 184 GPHVPNMRFCQHF-KLQKVAGAYWRGDSKNKMLQRIYGTAWADKKQLAEYLTRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQH 303
           DHRK+ + +DL+H+ E+  G++FWH  GW IF+ L +++R K+ + DY+E+  P ++D+ 
Sbjct: 243 DHRKIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW +Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWQNYADLMFT------TQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+ +E      ++  IY  FGF  I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQIESEVTSCIKMVYDIYSTFGFTNI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPE R+GSD +WD      +         + + +   +  GEGAFYGPK E+ L
Sbjct: 417 AVKLSTRPENRIGSDEMWD------RAEAGLAAALAHNGLEYEIQEGEGAFYGPKIEFAL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D +GR+WQCGT+Q+DF LP R +A YV   + +  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 RDCLGREWQCGTVQLDFALPGRLDATYVAEDNSRKTPVMIHRAILGSIERFIGIITEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P QA+V  IT S  +Y Q++A  L    L ++TD RNE + +KIREH+++++
Sbjct: 531 GFFPAWLAPTQAVVMNITDSQADYVQKVAKQLSDVGLRVKTDLRNEKVGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           P +++CGDKE +E  + +R          ++ +   IL  +    + +
Sbjct: 591 PYMLVCGDKEIAEGKVAVRTRKGADLGTFTVEEFAEILKNQVRSRELK 638


>gi|325917697|ref|ZP_08179888.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Xanthomonas
           vesicatoria ATCC 35937]
 gi|325536091|gb|EGD07896.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Xanthomonas
           vesicatoria ATCC 35937]
          Length = 634

 Score =  669 bits (1727), Expect = 0.0,   Method: Composition-based stats.
 Identities = 287/644 (44%), Positives = 419/644 (65%), Gaps = 16/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +T PDGS + F    +   VA+SI   LAK  +A  ++G++ D SD +  + S+ II
Sbjct: 1   MINITLPDGSRREFESPVSVMQVAQSIGAGLAKATIAGQVDGQLVDASDVIDHDASLRII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   + +IRHSCAH++  AV+ ++PEV++ IGP+I +GFYYD   E+PF+ +++A I
Sbjct: 61  TAKDAEGVEIIRHSCAHLVGHAVKQLYPEVKMVIGPVIAEGFYYDIYSERPFTPEDMAAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-ENVTLYRQGEWFD 181
           E++MQE+IA+D   +K+     +  E+F  + E YK+ ++E +      + LY   E+ D
Sbjct: 121 EQRMQELIAQDYDVIKKVTPRAEVIEVFAQRGEEYKLRLIEDMSEDITAMGLYYHQEYVD 180

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           +CRGPHV +T  +K F KL +++GAYWRGD+    L RIYGTAW  +++L  Y+  +EE+
Sbjct: 181 MCRGPHVPNTRFLKAF-KLTRISGAYWRGDAKNEQLQRIYGTAWADKKQLDAYILRMEEA 239

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
           +KRDHR++ +  DLFH+ E+  G++FWH KGW ++Q +  YMR+  +D  Y E+  PQ+L
Sbjct: 240 DKRDHRRIGKAQDLFHLQEEAPGLVFWHPKGWSLWQVVEQYMRKVYRDSGYGEVRCPQIL 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D  LWQ+SGHWD+Y+  MF       T  + RT+A+KPMNCPGHV VFN GL SYR+LP+
Sbjct: 300 DVSLWQKSGHWDNYQDAMFF------TESEKRTYAVKPMNCPGHVQVFNQGLHSYRDLPI 353

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R  EFG+ +RNEPSG+LHG++RVRGFTQDD HVFC + Q+  E    H   +++Y  FGF
Sbjct: 354 RYGEFGACHRNEPSGALHGILRVRGFTQDDGHVFCLESQIEAEVTAFHQQALAVYTAFGF 413

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           + I +K++ RPEKR+G D  WD AE  ++  L          +    L GEGAFYGPK E
Sbjct: 414 DDIEIKIALRPEKRLGDDGTWDKAEAALRTAL------GVCGVEWQELPGEGAFYGPKIE 467

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           Y LKDAIGR WQ GT+QVDF +P R  A YV+ +S+K HPVM+HRA+ GS+ERFIGI+IE
Sbjct: 468 YHLKDAIGRTWQLGTMQVDFMMPGRLGAEYVDENSQKKHPVMLHRAIVGSMERFIGILIE 527

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +  G  P WL+P+Q +V  IT +  +Y   +   L +    +  D RNE I YKIREH++
Sbjct: 528 HHAGAFPSWLAPVQVVVANITDAQADYVDSVRKTLANQGFRVNADLRNEKIGYKIREHTL 587

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +++P +++ GD+E    ++ +R         +++   +  L  E
Sbjct: 588 QRVPYLLVVGDREKENGAVAVRTRSGEDLGTMTVSAFVERLQAE 631


>gi|229150586|ref|ZP_04278801.1| Threonyl-tRNA synthetase [Bacillus cereus m1550]
 gi|228632895|gb|EEK89509.1| Threonyl-tRNA synthetase [Bacillus cereus m1550]
          Length = 640

 Score =  669 bits (1727), Expect = 0.0,   Method: Composition-based stats.
 Identities = 277/644 (43%), Positives = 433/644 (67%), Gaps = 17/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEII 62
            I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N  + DL   + E   +EII
Sbjct: 5   MIEIKFPDGSVKEFVNGVTLEEIAGSISSSLKKKAVAGKVNDGLYDLRRNIEENAEVEII 64

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +    + + RHS AHI+A+AV+ ++ ++ + +GP+IE+GFYYD D     + ++L +I
Sbjct: 65  TIDSNEGVEIARHSAAHILAQAVKRLYGDINLGVGPVIENGFYYDMDLPSSVNIEDLRRI 124

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M++II  +    +  +S E+A +LF+   +  K+E+LE+IP+ E+VTLY+QGE+ DL
Sbjct: 125 EKEMKKIINENIKIERVEVSREEAAKLFQEMNDRLKLELLEAIPSGESVTLYKQGEFVDL 184

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ STG +K F     V+GAYWRGDSN  +L RIYG A+++Q+EL +YL+F+EE+ 
Sbjct: 185 CRGPHLPSTGYLKAFQLTH-VSGAYWRGDSNNQVLQRIYGVAFSSQKELEEYLHFVEEAA 243

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KR+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R  + + +Y+E+ TP +++
Sbjct: 244 KRNHRKLGSELELFMFSEEAPGMPFYLPKGQMIRNELEAFLREIQKEYNYQEVRTPFMMN 303

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           Q +W++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R
Sbjct: 304 QEVWERSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIR 357

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           + EFG V+R+E SG+L+GL+RVR F QDDAH+F T +Q+ +E   +   I  +YK FGFE
Sbjct: 358 MCEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPKQIEDEIKSVMAQIDYVYKTFGFE 417

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPE  +G D LW+ AE  ++ VL ++           +  G+GAFYGPK ++
Sbjct: 418 Y-EVELSTRPEDSMGDDKLWEQAEAALENVLQSLNY------KYRLNEGDGAFYGPKIDF 470

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+ R  QCGTIQ+DF +P +F+  Y++ ++EK  PV+IHRAV GS++RF+ I+IE+
Sbjct: 471 HIKDALNRSHQCGTIQLDFQMPEKFDLNYIDENNEKKRPVVIHRAVLGSLDRFLAILIEH 530

Query: 542 FKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           F G  P W++P+Q  V  ++++   +YA EIA+ L    + +E D R+E + YKIRE  +
Sbjct: 531 FGGAFPAWVAPVQVKVIPVSNAVHEQYANEIAHKLAQAGVRVEQDARDEKLGYKIREAQM 590

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +K+P +++ GDKE    ++ +R++G   ++ ++L   +  + +E
Sbjct: 591 QKVPYVLVIGDKEMENGAVNVRKYGEEKSEVIALDVFVASIEEE 634


>gi|319651798|ref|ZP_08005923.1| threonyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
 gi|317396450|gb|EFV77163.1| threonyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
          Length = 643

 Score =  669 bits (1727), Expect = 0.0,   Method: Composition-based stats.
 Identities = 261/652 (40%), Positives = 416/652 (63%), Gaps = 20/652 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           M   +K++FPDG++K +P   T  D+A SIS  L KKA+A  ++G++ DL  P+  +G+I
Sbjct: 1   MSEVVKVSFPDGAVKEYPKGTTTEDIAASISPGLKKKAIAGKLDGEMYDLRRPIEKDGAI 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EI+TP+   +L V+RHS AH+MA+A++ ++  V++ +GP+IE GFYYD D E+  S ++L
Sbjct: 61  EIVTPDSNDALEVLRHSTAHLMAQAIKRLYKNVKLGVGPVIEGGFYYDIDLEESLSPEDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEK+M++II  +   +++ +S  +A ++++   + YK+E++E+IP  E VT+Y QGE+
Sbjct: 121 PVIEKEMKKIINENLDVVRKEVSRNEAVQMYKEIGDEYKLELIEAIPEDETVTIYEQGEF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRG HV STG++K+F KL+ +AGAYWRGDS+  ML RIYGTA+  +++L ++L  LE
Sbjct: 181 FDLCRGVHVPSTGKLKEF-KLLSIAGAYWRGDSDNKMLQRIYGTAFFKKEDLAEHLRLLE 239

Query: 240 ESEKRDHRKLAREMDLFH-IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           E+++RDHRK+ +E++LF    + G G+  W  KG  I + +  Y+  K +   Y+ + TP
Sbjct: 240 EAKERDHRKIGKELNLFMNSQKVGQGLPMWLPKGATIRRNIERYIVDKEERLGYDHVYTP 299

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    L++ SGHWD Y+ +MF V   D+         L+PMNCP H+ ++ +G+ SYRE
Sbjct: 300 IMGSVDLYKTSGHWDHYQEDMFPVMEMDN-----EQLVLRPMNCPHHMMIYKNGIHSYRE 354

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+  E  ++ +LI+ +YKD
Sbjct: 355 LPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEEFKRVVHLILEVYKD 414

Query: 418 FGFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           F       +LS R  +        D +W+ A+ ++K  +D I       ++     GE A
Sbjct: 415 FDINDYSFRLSYRDPQDTEKYFDDDEMWEKAQAMLKEAMDEIG------LDYFEAEGEAA 468

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  +K A+G+D    T+Q+DF LP RF+  YV    +   PV+IHR V  ++ER
Sbjct: 469 FYGPKLDVQVKTALGKDETLSTVQLDFLLPERFDLTYVAEDGKPHRPVVIHRGVVSTMER 528

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETIN 592
           F+  +IE +KG  P WL+P+Q  V  ++     +YA+++   L++    +E D RNE I 
Sbjct: 529 FVAFLIEEYKGAFPTWLAPVQVQVIPVSPDIHFDYAKQVREQLQAEGFRVELDDRNEKIG 588

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           YKIRE  ++K P +++ GD E +E+++ +R++G   ++ VS  D I  L  E
Sbjct: 589 YKIREAQMQKTPYMLVVGDNEVAEKAVNVRKYGEQKSETVSFEDFISALKAE 640


>gi|49479942|ref|YP_036488.1| threonyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|218903521|ref|YP_002451355.1| threonyl-tRNA synthetase [Bacillus cereus AH820]
 gi|228927442|ref|ZP_04090498.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|229121934|ref|ZP_04251153.1| Threonyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|49331498|gb|AAT62144.1| threonine--tRNA ligase (threonyl-tRNA synthetase) [Bacillus
           thuringiensis serovar konkukian str. 97-27]
 gi|218538936|gb|ACK91334.1| threonyl-tRNA synthetase [Bacillus cereus AH820]
 gi|228661583|gb|EEL17204.1| Threonyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|228832235|gb|EEM77816.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
          Length = 639

 Score =  669 bits (1727), Expect = 0.0,   Method: Composition-based stats.
 Identities = 277/644 (43%), Positives = 432/644 (67%), Gaps = 17/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEII 62
            I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N ++ DL   + E   +EII
Sbjct: 5   MIEIKFPDGSVKEFVKGITLEEIAGSISSSLKKKAVAGNVNDELYDLRRNIEENAEVEII 64

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +    + + RHS AHI+A+AV+ ++ ++ + +GP+IE+GFYYD D     + ++L +I
Sbjct: 65  TIDSNEGVEIARHSAAHILAQAVKRLYGDINLGVGPVIENGFYYDMDLPSSVNVEDLRKI 124

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M++II  +    +  +S E+A +LF+   +  K+E+LE+IP+ E+VTLY+QGE+ DL
Sbjct: 125 EKEMKKIINENIKVERVEVSREEAAKLFQEMNDRLKLELLEAIPSGESVTLYKQGEFVDL 184

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ STG +K F     V+GAYWRGDSN  +L RIYG A+++Q+EL +YL+F+EE+ 
Sbjct: 185 CRGPHLPSTGYLKAFQLTH-VSGAYWRGDSNNQVLQRIYGVAFSSQKELEEYLHFVEEAA 243

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KR+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R  + + +Y+E+ TP +++
Sbjct: 244 KRNHRKLGNELELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMN 303

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           Q +W++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R
Sbjct: 304 QEVWERSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIR 357

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           + EFG V+R+E SG+L+GL+RVR F QDDAH+F T EQ+ +E   +   I  +YK FGF+
Sbjct: 358 MCEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPEQIEDEIKSVMAQIDYVYKTFGFK 417

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPE  +G D LW+ AE  ++ VL ++           +  G+GAFYGPK ++
Sbjct: 418 Y-EVELSTRPEDSMGDDKLWEQAEASLENVLQSLNY------KYRLNEGDGAFYGPKIDF 470

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+ R  QCGTIQ+DF +P +F+  Y++  +EK  PV+IHRAV GS++RF+ I+IE+
Sbjct: 471 HIKDALNRSHQCGTIQLDFQMPEKFDLNYIDEKNEKKRPVVIHRAVLGSLDRFLAILIEH 530

Query: 542 FKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           F G  P W++P+Q  V  ++++  V+YA E+A+ L    + +E D R+E + YKIRE  +
Sbjct: 531 FGGAFPAWVAPVQVKVIPVSNAVHVQYADEVADKLAQAGVRVERDMRDEKLGYKIREAQM 590

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +K+P +++ GDKE    ++ +R++G   +  + L   +  + +E
Sbjct: 591 QKVPYVLVIGDKEMENGAVNVRKYGEEKSDVIELDMFVESMKEE 634


>gi|154502817|ref|ZP_02039877.1| hypothetical protein RUMGNA_00631 [Ruminococcus gnavus ATCC 29149]
 gi|153796700|gb|EDN79120.1| hypothetical protein RUMGNA_00631 [Ruminococcus gnavus ATCC 29149]
          Length = 642

 Score =  669 bits (1727), Expect = 0.0,   Method: Composition-based stats.
 Identities = 286/650 (44%), Positives = 409/650 (62%), Gaps = 16/650 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K+   DGS K +    +  ++A  IS  LA+ A A  I+G+V DL   V ++  + I+T
Sbjct: 1   MKIILKDGSFKEYENSKSVIEIAADISEGLARVATAGEIDGEVVDLRTVVDKDCELNILT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
             D +     RH+ +HIMA+AV+ ++PE ++AIGP + DGFYYD D+E PF++D+L +IE
Sbjct: 61  FNDEKGKGAFRHTASHIMAQAVKRLYPETKLAIGPSVADGFYYDVDRETPFTADDLEKIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M++I+  + P  +      +A E F+ K+E YKVE++E +P  E ++ Y QGE+ DLC
Sbjct: 121 KEMKKIVKENLPIEQFTKPRNEAIEYFKEKEEPYKVELIEDLPEDETISFYSQGEFTDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+ ST  VK F KL  +AGAYWRG     ML RIYGTA+  + EL +YL  LEE++K
Sbjct: 181 AGPHLMSTKYVKAF-KLTSLAGAYWRGSEKNKMLQRIYGTAFPKKAELEEYLNMLEEAKK 239

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           RDHRKL +E+ LF + ++G G  F+   G  +   L+ Y R    K  Y EI+TP +L +
Sbjct: 240 RDHRKLGKELGLFMMRDEGPGFPFFLPNGMVLKNVLLDYWREIHRKAGYVEISTPVMLSR 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
           HLW+ SGHWD Y+ NM+       T+ D   FA+KPMNCPG +  +    +SYR+LP+R+
Sbjct: 300 HLWETSGHWDHYKENMYT------TVIDEEDFAIKPMNCPGGILAYQAEPRSYRDLPIRM 353

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            E G V+R+E SG LHGLMRVR FTQDDAH+F T +Q+ +E   +  LI  +Y  FGF+ 
Sbjct: 354 GELGLVHRHEKSGQLHGLMRVRCFTQDDAHIFMTPDQIKDEIKGVAGLINEVYSLFGFKY 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +GSD  W+ A + ++G LD +       +   V  G+GAFYGPK ++ 
Sbjct: 414 H-VELSTRPEDSMGSDEDWEMATDALRGALDDLG------LPYVVNEGDGAFYGPKIDFH 466

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+D+IGR WQCGTIQ+DF LP RF   Y  +  EK  P+MIHR VFGSIERFIGI+IE+F
Sbjct: 467 LEDSIGRTWQCGTIQLDFQLPLRFELEYTGADGEKHRPIMIHRVVFGSIERFIGILIEHF 526

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P+Q  V  I+   +EY Q + + L +  +  E D R E I YKIRE  +KK
Sbjct: 527 AGAFPTWLAPVQVKVLPISDKYLEYGQSVLDQLNAAGIRAEIDTRAEKIGYKIREAQMKK 586

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           IP +++ G KE  E+ + +R   +    +  L + I  + +E+   + ++
Sbjct: 587 IPYMLVVGAKEEEEKKVSVRSRFAGDEGQKGLEEFIAAIMEETAKKEIRE 636


>gi|149916340|ref|ZP_01904860.1| threonyl-tRNA synthetase [Roseobacter sp. AzwK-3b]
 gi|149809794|gb|EDM69646.1| threonyl-tRNA synthetase [Roseobacter sp. AzwK-3b]
          Length = 663

 Score =  669 bits (1727), Expect = 0.0,   Method: Composition-based stats.
 Identities = 332/650 (51%), Positives = 441/650 (67%), Gaps = 10/650 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           + I LTFPDG+ +++    T +DVA  IS SLAKKA++  ++G+  DL  P++ + SI I
Sbjct: 2   AQISLTFPDGNSRSYDAGVTAADVAADISTSLAKKAISATLDGQHWDLQWPIQQDSSIAI 61

Query: 62  ITPEDP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            T +D  ++L +IRH  AHIMA AVQ +WP+V+V IGP+IE+G+YYDFD++ PF+ ++L 
Sbjct: 62  NTMKDEAQALELIRHDLAHIMARAVQELWPDVKVTIGPVIENGWYYDFDRKDPFTPEDLG 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEKKM+EII    P   +     +A + +E   E +KVE++E+IP  E + +Y  G W 
Sbjct: 122 VIEKKMKEIINLRDPVRTEIWDRARAVKHYEDSGEPFKVELIEAIPGTEPLRMYWHGPWQ 181

Query: 181 DLCRGPHVRSTGQ-VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           DLCRGPH+++TGQ     FKLM VAGAYWRGDSNR ML RIYG A+  +++L  YL FLE
Sbjct: 182 DLCRGPHLQNTGQVPADAFKLMSVAGAYWRGDSNRQMLQRIYGVAFLNREKLKDYLTFLE 241

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQ 298
           E+EKRDHRKL REMDLFH+ E+  G IFWH  GW I+ TL  YMRR+ +   Y E+NTPQ
Sbjct: 242 EAEKRDHRKLGREMDLFHMQEEAPGQIFWHPNGWTIYTTLQDYMRRQQRRGGYVEVNTPQ 301

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW+ SGHWD Y+ +MF V+  +D  ++    ALKPMNCP HV +FN GLKSYR+L
Sbjct: 302 VVDRKLWEASGHWDKYQEHMFIVEVDEDHAREKSINALKPMNCPCHVQIFNRGLKSYRDL 361

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFGS  R EPSG+LHG+MRVRGFTQDDAH+FC ++Q+  E  K    +  IY+D 
Sbjct: 362 PLRMAEFGSCNRYEPSGALHGIMRVRGFTQDDAHIFCREDQIEAETKKFIGFLSEIYRDL 421

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF    VK S RPEKR GSD +WD +E+           ++    +  + LGEGAFYGPK
Sbjct: 422 GFSDFKVKFSDRPEKRAGSDDVWDKSESA------LKAATAAAGADFELNLGEGAFYGPK 475

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E++L DAIGRDWQCGT+QVDF LP R +A Y+     K  PVM+HRAV GS ERFIGI+
Sbjct: 476 LEFVLTDAIGRDWQCGTLQVDFVLPERLDATYIAEDGAKHRPVMLHRAVLGSFERFIGIL 535

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE   G LP W++P Q +V +I S A  Y Q++   L +  +  E D RNE INYK+REH
Sbjct: 536 IEEHAGKLPFWMAPRQVVVASIVSEANAYVQDVVARLVAAGVRAEADIRNEKINYKVREH 595

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
           S+ K+P+I+ CG KE  + ++ +RR G   +    L D    L +E+ PP
Sbjct: 596 SVGKVPVILACGMKEVEDGTVSLRRLGEKQSTVQPLADVTEALKREATPP 645


>gi|304408774|ref|ZP_07390395.1| threonyl-tRNA synthetase [Shewanella baltica OS183]
 gi|307302777|ref|ZP_07582532.1| threonyl-tRNA synthetase [Shewanella baltica BA175]
 gi|304352595|gb|EFM16992.1| threonyl-tRNA synthetase [Shewanella baltica OS183]
 gi|306913137|gb|EFN43559.1| threonyl-tRNA synthetase [Shewanella baltica BA175]
          Length = 642

 Score =  669 bits (1727), Expect = 0.0,   Method: Composition-based stats.
 Identities = 289/647 (44%), Positives = 416/647 (64%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS + F    +  DVA  I   LAK  +A  +NG++ D  D +  +  +
Sbjct: 1   MPV---ITLPDGSKREFAHAVSTLDVAADIGPGLAKACIAGRVNGELKDACDLIETDAEL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   + ++RHSCAH++  A++ +WPE ++AIGP+I++GFYYD D E   + D++
Sbjct: 58  SIITAKDEEGVEILRHSCAHLLGHAIKQMWPETKMAIGPVIDNGFYYDIDLEHKLTQDDI 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M ++   +   +K+ +S ++AR+ F ++ E YK+ IL E+I       LY   E
Sbjct: 118 DALEKRMLQLAKTNYDVIKRVVSWQEARDTFAARGEDYKIAILDENISKDATPALYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +    + F KLM +AGAYWRG+S   ML RIYGTAW  ++ L+ +L  L
Sbjct: 178 YTDMCRGPHVPNMRFCQHF-KLMSIAGAYWRGNSENKMLQRIYGTAWADKKALSTHLTRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF  L  ++RRK+ +  Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWSIFLELERFIRRKLNQYTYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+
Sbjct: 297 LMMDRVLWERSGHWDKYSEAMFT------TSSENREYAIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFG  +RNEPSGSLHGLMRVRGFTQDDAH+FCT  Q+  E      ++   Y  
Sbjct: 351 LPLRMAEFGCCHRNEPSGSLHGLMRVRGFTQDDAHIFCTDSQVQEEVSACIQMVYDTYAT 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFE I+VKLSTRPEKR+G DA+WD AE  +K  L        + I   +L GEGAFYGP
Sbjct: 411 FGFENIVVKLSTRPEKRIGDDAMWDRAEEALKQALRD------NNIEFTILPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+D+ LPSR  A YV   + +  PVMIHRA+ GS+ERF+GI
Sbjct: 465 KIEFTLHDCLDRAWQCGTVQLDYALPSRLGATYVAEDNSRQTPVMIHRAILGSLERFLGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE + G  P WL+P+Q +V  IT    +Y +E+    K   +    D RNE I +KIRE
Sbjct: 525 LIEEYAGRFPTWLAPMQVVVMNITDKQADYVEEVVKFFKEQGIRASFDLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H+++++P +++ GD+E   + + +R        K+ L D    + ++
Sbjct: 585 HTLRRVPYLLVVGDQEMENKEVAVRTRDGIDLGKMRLEDFATKIHQQ 631


>gi|171058428|ref|YP_001790777.1| threonyl-tRNA synthetase [Leptothrix cholodnii SP-6]
 gi|238689097|sp|B1XYZ3|SYT_LEPCP RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|170775873|gb|ACB34012.1| threonyl-tRNA synthetase [Leptothrix cholodnii SP-6]
          Length = 637

 Score =  669 bits (1726), Expect = 0.0,   Method: Composition-based stats.
 Identities = 330/647 (51%), Positives = 438/647 (67%), Gaps = 19/647 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAIN----GKVCDLSDPVR-EGS 58
            I +  PDGS + F    T ++VA SI   LAK A+A  I      ++ D S  +  + +
Sbjct: 1   MIAIQLPDGSRREFDGPVTVAEVAASIGAGLAKAALAGRIGTGDAARLVDTSHRIEADEA 60

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           + IIT +D   L VIRHS AH++A AV+ ++P+ QV IGP IE+GF+YDF  ++PF+ D+
Sbjct: 61  LSIITAKDAAGLDVIRHSTAHLLAYAVKELFPDAQVTIGPTIENGFFYDFSYKRPFTPDD 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           LA IEKKM ++ A+D P ++  +  ++A   F+S  EAYK EI+ESIPA + V+LY +G+
Sbjct: 121 LAAIEKKMGDLAAKDEPVVRSVMPRDEAVSYFKSIGEAYKAEIIESIPADQAVSLYAEGK 180

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + DLCRGPHV STG++K FFKLMKVAGAYWRGD    ML RIYGTAW T+ +L +YL  L
Sbjct: 181 FTDLCRGPHVPSTGKLK-FFKLMKVAGAYWRGDHRNEMLQRIYGTAWATKDDLQKYLVML 239

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
           EE+EKRDHRKL RE+DLFHI E   GV+FWH KGW ++Q +  YMRR  + + Y+E+  P
Sbjct: 240 EEAEKRDHRKLGRELDLFHIDEHAPGVVFWHPKGWTVWQQVEQYMRRVYRDNGYQEVKGP 299

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           Q+LD+ LW+++GHWD YR NMF       T  + R +ALKPMNCPGH+ +F  G+KSYR+
Sbjct: 300 QILDKGLWEKTGHWDKYRDNMFT------TESEKRDYALKPMNCPGHILIFKQGIKSYRD 353

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R  EFG  +RNEPSG LHG+MRVRGFTQDD H+FCT++Q+  EC     L+  +Y D
Sbjct: 354 LPLRYGEFGQCHRNEPSGGLHGIMRVRGFTQDDGHIFCTEDQILPECDAFTTLLQKVYAD 413

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF +I+ K++TRPEKR+GSD LWD AE  +   L              +  GEGAFYGP
Sbjct: 414 FGFTEILYKVATRPEKRIGSDELWDKAEAALIASL------RNSGCEFEISPGEGAFYGP 467

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K EY LKDA+GR WQCGTIQVDF+LP R +A YV    E+ HPVM+HRA+ GS+ERFIGI
Sbjct: 468 KVEYTLKDALGRHWQCGTIQVDFSLPERLDAEYVAESGERLHPVMLHRAILGSLERFIGI 527

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE   G LP WL+P Q  V  IT    +YA+++A  L+   L +  D RNE I YKIRE
Sbjct: 528 LIEEHAGALPFWLAPTQVSVLNITDGQADYARDVARSLQKQGLRVALDLRNEKITYKIRE 587

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           HS++K+P +I+ GDKE +  ++ +R  G+     ++L      L  E
Sbjct: 588 HSLQKVPYLIVVGDKERASGAVAVRARGNQDLGVMALEAFSQKLAAE 634


>gi|119383706|ref|YP_914762.1| threonyl-tRNA synthetase [Paracoccus denitrificans PD1222]
 gi|166225473|sp|A1B0M2|SYT_PARDP RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|119373473|gb|ABL69066.1| Ser-tRNA(Thr) hydrolase [Paracoccus denitrificans PD1222]
          Length = 648

 Score =  669 bits (1726), Expect = 0.0,   Method: Composition-based stats.
 Identities = 336/653 (51%), Positives = 455/653 (69%), Gaps = 10/653 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           S I LTFPDG+ +++P   T ++VA SI+ SLAK A++ +++G+  DL  P+   G I I
Sbjct: 2   SQISLTFPDGNARDYPAGVTAAEVAASIAPSLAKNAISASLDGQHIDLQWPIAASGRIAI 61

Query: 62  ITPEDPR-SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            T +D   +L +IRH  AHIMA AVQ +WP+V+V IGP+ + G++YDFD+ +PF+ ++L 
Sbjct: 62  NTMKDSEPALELIRHDLAHIMARAVQELWPDVKVTIGPVRDQGWFYDFDRAEPFTPEDLG 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IE++M++IIA   P   +    ++AR  +E++ E +K+E+L+ IP  E + +Y  G+W 
Sbjct: 122 AIEQRMKQIIAARDPVRTEVWDRDRARAHYEAQGEPFKIELLDRIPEGEPIRMYWHGDWQ 181

Query: 181 DLCRGPHVRSTGQ-VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           DLCRGPH++ TGQ     FKL  VAGAYW GD++RPML RIYG A+  + +L  +L  LE
Sbjct: 182 DLCRGPHLQHTGQVPADAFKLTHVAGAYWLGDASRPMLQRIYGVAFRNRDDLKAHLTMLE 241

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+ KRDHRKL REM+LFH  E+  G++FWH  GW I++ L +YMRR++ + DY+EI TPQ
Sbjct: 242 EAAKRDHRKLGREMELFHFQEEAPGMVFWHPNGWSIYRELEAYMRRRLIRADYKEIKTPQ 301

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHW++YR NMF V+  ++  K+ R  ALKPMNCP HV V+N GLKSYR+L
Sbjct: 302 VVDRILWEKSGHWEAYRENMFIVEVDEEGAKEKRINALKPMNCPCHVQVYNQGLKSYRDL 361

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFGS +R EPSGS+HGLMRVRGF QDDAH+FCT++Q+  EC     L+ S+YKD 
Sbjct: 362 PLRLAEFGSCHRYEPSGSMHGLMRVRGFVQDDAHIFCTEDQIEAECAGFIGLLSSVYKDL 421

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFEK  +KLSTRP+ RVGSD +WD AE  +KG ++ +       +   V  G+GAFYGPK
Sbjct: 422 GFEKFDIKLSTRPDVRVGSDEIWDKAEAALKGAIEHL------DLPYEVNPGDGAFYGPK 475

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++ L DAIGR+WQCGT Q DFNLP R  A YV     K  PVM+HRAV GS ERFIGI+
Sbjct: 476 LDFKLTDAIGREWQCGTFQCDFNLPQRLEAEYVGEDGAKHMPVMLHRAVLGSFERFIGIL 535

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IEN+ G LPLWL+P Q +V +I S A +Y  E+   L++  L  E D RNE INYK+REH
Sbjct: 536 IENYSGKLPLWLAPRQVVVASIVSGADDYVHEVVAALRAAGLRAEADTRNEKINYKVREH 595

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           S+ K+P+I+  G KE  ERS+ IRR     ++   L  AI  L  E+ PPD +
Sbjct: 596 SVGKVPVIMAVGLKEVEERSVSIRRLDRQGSESHGLESAIATLRAEATPPDLR 648


>gi|319897020|ref|YP_004135215.1| threonyl-tRNA synthetase [Haemophilus influenzae F3031]
 gi|317432524|emb|CBY80883.1| threonyl-tRNA synthetase [Haemophilus influenzae F3031]
          Length = 643

 Score =  669 bits (1726), Expect = 0.0,   Method: Composition-based stats.
 Identities = 292/648 (45%), Positives = 426/648 (65%), Gaps = 16/648 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  +VA+ I   LAK  +A  +NG+  D  D +  + ++EIIT +
Sbjct: 4   ITLPDGSQRQFDRPVSVLEVAQDIGAGLAKATIAGRVNGERRDACDVIEQDATLEIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ ++P V++AIGP IE+GFYYD D ++  + +++  IEK+
Sbjct: 64  DEDGLEIIRHSCAHLLGHAIKQLFPNVKMAIGPTIENGFYYDVDLDRSLTQEDIDAIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K+ ++ ++AR+ FE + E YK+ IL E+I       LY   E+ D+CR
Sbjct: 124 MLELAKTNYDVVKKRVTWQEARDTFEKRGEPYKMAILDENIERTATPALYHHLEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +    + F KL KVAGAYWRGDS   ML RIYGTAW  +++L +YL  LEE+ KR
Sbjct: 184 GPHVPNMRFCQHF-KLQKVAGAYWRGDSKNKMLQRIYGTAWADKKQLAEYLTRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQH 303
           DHRK+ + +DL+H+ E+  G++FWH  GW IF+ L +++R K+ + DY+E+  P ++D+ 
Sbjct: 243 DHRKIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW +Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWQNYADLMFT------TQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+ +E      ++  IY  FGF  I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQIESEVTSCIKMVYDIYSTFGFTNI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPE R+GSD +WD      +         + + +   +  GEGAFYGPK E+ L
Sbjct: 417 AVKLSTRPENRIGSDEMWD------RAEGGLAAALAHNGLEYEIQEGEGAFYGPKIEFAL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D +GR+WQCGT+Q+DF LP R +A YV   + +  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 RDCLGREWQCGTVQLDFALPGRLDATYVAEDNNRKTPVMIHRAILGSIERFIGIITEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P QA+V  IT S  +Y Q++A  L    L ++TD RNE + +KIREH+++++
Sbjct: 531 GFFPAWLAPTQAVVMNITDSQADYVQKVAKQLSDVGLRVKTDLRNEKVGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           P +++CGDKE +E  + +R          ++ +   IL  +    + +
Sbjct: 591 PYMLVCGDKEIAEGKVAVRTRKGADLGTFTVEEFAEILKNQVRNRELK 638


>gi|212638370|ref|YP_002314890.1| threonyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
 gi|226701399|sp|B7GGN9|SYT_ANOFW RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|212559850|gb|ACJ32905.1| Threonyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
          Length = 643

 Score =  669 bits (1726), Expect = 0.0,   Method: Composition-based stats.
 Identities = 262/652 (40%), Positives = 417/652 (63%), Gaps = 20/652 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           M   +K+TFPDG++K FP   T  D+A SIS  L KKA+A  +N ++ DL  P+  +G+I
Sbjct: 1   MADVVKITFPDGAVKEFPKGVTTEDIAASISPGLKKKAIAGKLNERMIDLRTPIEEDGAI 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT + P +L ++RHS AH+MA+AV+ ++ +V++ +GP+IE+GFYYD D + P ++++L
Sbjct: 61  SIITQDMPEALDILRHSTAHLMAQAVKRLYKDVKLGVGPVIENGFYYDIDVDVPITAEDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IE++M++I+  +   +++ +S E+A   +E   +  K+E++  IP  E V++Y QGE+
Sbjct: 121 PKIEQEMKKIVKENLDIVRKEVSREEAIRRYEEIGDPLKIELINDIPEGEVVSIYEQGEF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRG HV STG++K+F KL+ VAGAYWRGDS   ML RIYGTA+  +++L +YL  L+
Sbjct: 181 FDLCRGVHVPSTGKIKEF-KLLSVAGAYWRGDSKNKMLQRIYGTAFFKKEDLDEYLRLLQ 239

Query: 240 ESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTP 297
           E+++RDHRKL +E+DLF  ++    G+  W  KG  I +T+  Y+  +++   Y+ + TP
Sbjct: 240 EAKERDHRKLGKELDLFMTSQKVGQGLPLWLPKGATIRRTIERYIVDKELSLGYQHVYTP 299

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    L++ SGHWD Y+  MF     D+         L+PMNCP H+ V+ H + SYRE
Sbjct: 300 VLGSVELYKTSGHWDHYKDGMFPPMEMDN-----EQLVLRPMNCPHHMMVYKHKIHSYRE 354

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+ +E  ++ NLI+ +YKD
Sbjct: 355 LPIRIAELGTMHRYEMSGALTGLQRVRGMTLNDAHIFVRPDQIKDEFKRVVNLILDVYKD 414

Query: 418 FGFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           FG      +LS R  +        DA+W+ A++++K  +D +       ++     GE A
Sbjct: 415 FGLTDYSFRLSYRDPQDKEKYYDDDAMWEKAQSMLKEAMDELG------LDYYEAEGEAA 468

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  ++ A+G+D    T+Q+DF LP RF+  Y+    +   PV+IHR V  ++ER
Sbjct: 469 FYGPKLDVQVRTALGKDETLSTVQLDFLLPERFDLTYIGEDGKPHRPVVIHRGVVSTMER 528

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETIN 592
           F+  +IE +KG  P WL+PIQ  V  +  S  ++YA E+ + L+   + +E D R E I 
Sbjct: 529 FVAFLIEEYKGAFPTWLAPIQVQVIPVAPSIHMDYAYEVKHALQVAGIRVEVDEREEKIG 588

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           YKIRE  ++KIP +++ GD E +ER++ +R++G   ++ + L   +  + KE
Sbjct: 589 YKIREAQMQKIPYMLVVGDNEVNERAVNVRKYGEQKSETMPLDAFVDSIAKE 640


>gi|170717553|ref|YP_001784641.1| threonyl-tRNA synthetase [Haemophilus somnus 2336]
 gi|189083611|sp|B0UU42|SYT_HAES2 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|168825682|gb|ACA31053.1| threonyl-tRNA synthetase [Haemophilus somnus 2336]
          Length = 642

 Score =  669 bits (1726), Expect = 0.0,   Method: Composition-based stats.
 Identities = 297/647 (45%), Positives = 431/647 (66%), Gaps = 16/647 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS + F    +  +VA+SI   LAK  +A  +NG+  D SD +  + ++EIIT +
Sbjct: 4   ITLPDGSQRQFDNPVSVLEVAQSIGSGLAKATIAGRVNGERRDASDMISEDANLEIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHS AH++  A++ ++P V++AIGP I++GFYYD D ++  + +++  +EK+
Sbjct: 64  DEDGLEIIRHSTAHLLGHAIKQLFPNVKMAIGPTIDNGFYYDIDLDRSLTQEDIDTLEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K+ +S ++AR+ FES+ E YK+ IL E+I   +   LY   E+ D+CR
Sbjct: 124 MLELAKTNYDVIKKRVSWQEARDTFESRAEPYKIAILDENIAKDDQPALYHHEEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +      F KLMKVAGAYWRG+S+  ML RIYGTAW  +++L  YL+ LEE+ KR
Sbjct: 184 GPHVPNMRFCHHF-KLMKVAGAYWRGNSDNKMLQRIYGTAWADKKQLADYLHRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ + ++L+H+ E+  G++FWH  GW IF+ L +++R K+K+ DY+E+  P ++D+ 
Sbjct: 243 DHRKIGKALNLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW +Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWERTGHWQNYADLMFT------TQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+ +E      ++  IY  FGF  I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQIESEVTSCIKMVYDIYSTFGFTDI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPEKR+G D +WD AE  +   L        + +   +  GEGAFYGPK E+ L
Sbjct: 417 FVKLSTRPEKRIGEDVMWDRAEQGLANALKH------NGLEYEIQEGEGAFYGPKIEFAL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D + R+WQCGTIQ+DF LP R +A YV   + +  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 RDCLDREWQCGTIQLDFALPGRLDATYVAEDNARRTPVMIHRAILGSIERFIGIITEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+PIQA+V  IT S  +Y Q++        L ++ D RNE + +KIREH+++++
Sbjct: 531 GFFPAWLAPIQAVVMNITDSQADYVQKVVKQFSEAGLRVKADIRNEKVGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDC 650
           P +++CGDKE  E  I +R    T     S+ + + IL ++    + 
Sbjct: 591 PYMLVCGDKEIVENKIAVRTRKGTDLGTFSVEEFVEILKQQVRKREL 637


>gi|238757782|ref|ZP_04618965.1| Threonyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
 gi|238704025|gb|EEP96559.1| Threonyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
          Length = 642

 Score =  669 bits (1726), Expect = 0.0,   Method: Composition-based stats.
 Identities = 289/647 (44%), Positives = 431/647 (66%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D SD +  +  +
Sbjct: 1   MPV---ITLPDGSQRHYDHAVSALDVALDIGPGLAKACIAGRVNGELVDASDLIESDAHL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L ++RHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D ++  + ++L
Sbjct: 58  AIITTKDAEGLEILRHSCAHLLGHAIKQLWPDTKMAIGPVIDNGFYYDVDIDRTLTQEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             ++++M E+  +D   +K+ +S ++AR++F ++ E YKV IL E+I   +   LY   E
Sbjct: 118 DLLDQRMHELADKDYDVIKKKVSWQEARDVFAARGEDYKVAILDENISHDDRPGLYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KL K +GAYWRGDS   ML RIYGTAW  +++L  YL  L
Sbjct: 178 YVDMCRGPHVPNMRFCHHF-KLQKTSGAYWRGDSKNKMLQRIYGTAWGDKKQLNAYLQRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF+ L +++R K+K+  Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELETFVRMKLKEYQYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW+++GHW++Y  +MF       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 297 FMMDRVLWEKTGHWENYAEHMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  
Sbjct: 351 LPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQVRDEVNSCIKMVYDMYST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI+VKLSTRPEKR+GSD LW  AE+ +   L      +++ I      GEGAFYGP
Sbjct: 411 FGFEKIVVKLSTRPEKRIGSDDLWTRAEDDLAAAL------TENGIPFDYQPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF+LP R +A Y+  ++++  PVMIHRA+ GS+ERFIGI
Sbjct: 465 KIEFTLHDCLDRAWQCGTVQLDFSLPGRLSASYIGENNDRQVPVMIHRAILGSMERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E + G  P WL+P+Q +V  IT S  +Y Q++   L+   +  + D RNE I +KIRE
Sbjct: 525 LTEEYAGFFPTWLAPVQVVVMNITDSQSDYVQQVTKKLQDAGIRAKADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H+++++P +++CGDKE     I +R         + +   +  L  E
Sbjct: 585 HTLRRVPYMLVCGDKEVESGKIAVRTRRGKDLGSLDVNVVVDKLLTE 631


>gi|124267077|ref|YP_001021081.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Methylibium
           petroleiphilum PM1]
 gi|166225459|sp|A2SH07|SYT_METPP RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|124259852|gb|ABM94846.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Methylibium
           petroleiphilum PM1]
          Length = 635

 Score =  669 bits (1726), Expect = 0.0,   Method: Composition-based stats.
 Identities = 320/636 (50%), Positives = 431/636 (67%), Gaps = 15/636 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            I +T PDGS + FP   T ++VA SI   LAK A+   ++GK+ D    +  +  + I+
Sbjct: 1   MIVITLPDGSQREFPGPVTVAEVAASIGTGLAKAALGGRVDGKLVDTGHRIEGDARLAIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   L +IRHS AH++A AV+ ++PE QV IGP+IE+GFYYDF  ++PF+ ++LA I
Sbjct: 61  TDKDADGLDLIRHSTAHLLAYAVKELFPEAQVTIGPVIENGFYYDFSYKRPFTPEDLAAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E KM E+  +D    ++ L  ++A   F+S  E YK EI+  IPA ++V+LYR+G + DL
Sbjct: 121 EAKMTELAKKDEKVERRVLPRDEAVAYFKSIGEDYKAEIIAGIPAGQDVSLYREGRFEDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG+++ F KLMKVAGAYWRGD    ML RIYGTAW ++ EL QYL+ LEE+E
Sbjct: 181 CRGPHVPSTGKLRHF-KLMKVAGAYWRGDHRNEMLQRIYGTAWASKDELQQYLHMLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD 301
           KRDHRKL RE+DLFH+ E   G++FWH KGW ++Q +  YMR   + + Y E+  PQ+LD
Sbjct: 240 KRDHRKLGRELDLFHLDEHAPGLVFWHPKGWTVWQQVEQYMRAVYRDNGYLEVKGPQILD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           Q LW+++GHWD YR NMF       T  + R +ALKPMNCPGH+ ++  G+KSYR+LP+R
Sbjct: 300 QGLWEKTGHWDKYRENMFV------TESEKRDYALKPMNCPGHILIYKQGIKSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
             EFG  +RNEP+G LHG+MRVRGFTQDD H+FCT+E +  EC+    L+  +YKDFGF 
Sbjct: 354 YGEFGQCHRNEPTGGLHGIMRVRGFTQDDGHIFCTEEHILPECVAYTALLQKVYKDFGFN 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            I+ K++TRPEKR+GSDA+WD AE+ +   L              V  G+GAFYGPK EY
Sbjct: 414 DIIYKVATRPEKRIGSDAVWDKAEHALMESLRASGC------EFVVSPGDGAFYGPKIEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            LKDA+GR WQCGT+QVDF+LP R +A YV    E+  PVM+HRA+ GS+ERFIGI+IE 
Sbjct: 468 TLKDALGRQWQCGTMQVDFSLPERLDAVYVAESGERLFPVMLHRAIVGSLERFIGILIEQ 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G LP WL+P+Q +V  IT    +YA EIA  L+   +    D RNE I YKIREHS++
Sbjct: 528 HAGALPAWLAPVQVMVLNITDGQADYAAEIAKTLQKQGVRAGVDLRNEKITYKIREHSMQ 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
           K+P I++ GDKE +  ++ +R  G+     + L   
Sbjct: 588 KLPYILVVGDKEKAAGAVAVRARGNQDLGVMPLDAF 623


>gi|157375257|ref|YP_001473857.1| threonyl-tRNA synthetase [Shewanella sediminis HAW-EB3]
 gi|189083624|sp|A8FV56|SYT_SHESH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|157317631|gb|ABV36729.1| threonyl-tRNA synthetase [Shewanella sediminis HAW-EB3]
          Length = 642

 Score =  669 bits (1726), Expect = 0.0,   Method: Composition-based stats.
 Identities = 282/647 (43%), Positives = 417/647 (64%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP    +T PDGS + F    +  DVA  I   LAK  +A  +NG++ D  D +  +  +
Sbjct: 1   MPV---ITLPDGSKREFANPVSTLDVAADIGPGLAKACIAGRVNGELKDACDIIDTDSEL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   + ++RHSCAH++  A + +WPE ++AIGP+I++GFYYD D +   + +++
Sbjct: 58  SIITAKDEEGVEILRHSCAHLLGHAFKQLWPEAKMAIGPVIDNGFYYDIDLDHKLTQEDI 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             ++K+M ++   +    K+  S + AR+ FE++ E YK+E+L E+I   +   LY   E
Sbjct: 118 DALQKRMTQLAKTNYKVEKRVGSWQVARDTFEARGETYKMEVLDENISKDDQPALYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +    + F KLM VAGAYWRG+S+  ML R+YGTAW  ++ L  +L  L
Sbjct: 178 YVDMCRGPHVPNMKFCQNF-KLMSVAGAYWRGNSDNKMLQRVYGTAWADKKALKVHLNRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW +F  L  ++R+K+ +  Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWSLFLELEKFIRQKLGQYTYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+
Sbjct: 297 LMMDRVLWERSGHWDKYADAMFT------TNSENREYAIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFG  +RNEPSGSLHGLMRVRGFTQDDAHVFCT++Q+  E      ++   Y+ 
Sbjct: 351 LPLRMAEFGCCHRNEPSGSLHGLMRVRGFTQDDAHVFCTEDQVQQEVSACIKMVYDTYET 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF+ I+VKLSTRPEKR+G D +WD +E  +K  L        + I   +L GEGAFYGP
Sbjct: 411 FGFKDIVVKLSTRPEKRIGDDDMWDRSEEALKQALTA------NGIAYEILPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+D+ LP R  A YV   + +  PVMIHRA+ GS+ERF+GI
Sbjct: 465 KIEFTLHDCLDRAWQCGTVQLDYALPGRLGATYVAEDNSRQTPVMIHRAILGSLERFLGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE + G  P WL+P+Q +V  IT    +Y  E+ N+ K   +    D RNE I +KIRE
Sbjct: 525 LIEEYAGKFPTWLAPMQVVVMNITDKQSDYVDEVVNIFKESGIRASKDLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H+++++P +++ GD+E   + + +R        K+ + D    + ++
Sbjct: 585 HTLRRVPYLLVVGDQEMDNKEVAVRTRDGVDLGKMRIEDFASKINEQ 631


>gi|225864350|ref|YP_002749728.1| threonyl-tRNA synthetase [Bacillus cereus 03BB102]
 gi|225785860|gb|ACO26077.1| threonine--tRNA ligase [Bacillus cereus 03BB102]
          Length = 639

 Score =  669 bits (1726), Expect = 0.0,   Method: Composition-based stats.
 Identities = 278/644 (43%), Positives = 431/644 (66%), Gaps = 17/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEII 62
            I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N ++ DL   + E   +EII
Sbjct: 5   MIEIKFPDGSVKEFVKGITLEEIAGSISSSLKKKAVAGKVNDELYDLRRNIEENAEVEII 64

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +    + + RHS AHI+A+AV+ ++ ++ + +GP+IE+GFYYD D     + ++L +I
Sbjct: 65  TIDSNEGVEIARHSAAHILAQAVKRLYGDINLGVGPVIENGFYYDMDFPSSVNVEDLRKI 124

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M++II  +    +  +S E+A +LF+   +  K+E+LE+IP+ E+VTLY+QGE+ DL
Sbjct: 125 EKEMKKIINENIKIERVEVSREEAAKLFQEMNDRLKLELLEAIPSGESVTLYKQGEFVDL 184

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ STG +K F     V+GAYWRGDSN  +L RIYG A+++Q+EL +YL+F+EE+ 
Sbjct: 185 CRGPHLPSTGYLKAFQLTH-VSGAYWRGDSNNQVLQRIYGVAFSSQKELEEYLHFVEEAA 243

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KR+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R  + + +Y+E+ TP +++
Sbjct: 244 KRNHRKLGNELELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMN 303

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           Q +W++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R
Sbjct: 304 QEVWERSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIR 357

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           + EFG V+R+E SG+L+GL+RVR F QDDAH+F T EQ+ +E   +   I  +YK FGFE
Sbjct: 358 MCEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPEQIEDEIKSVMAQIDYVYKTFGFE 417

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPE  +G D LW+ AE  ++ VL ++           +  G+GAFYGPK ++
Sbjct: 418 Y-EVELSTRPEDSMGDDKLWEQAEASLENVLQSLNY------KYRLNEGDGAFYGPKIDF 470

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+ R  QCGTIQ+DF +P +F+  Y++  +EK  PV+IHRAV GS++RF+ I+IE+
Sbjct: 471 HIKDALNRSHQCGTIQLDFQMPEKFDLNYIDEKNEKRRPVVIHRAVLGSLDRFLAILIEH 530

Query: 542 FKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           F G  P W++P+Q  V  ++++  V+YA E+A+ L    + +E D R+E + YKIRE  +
Sbjct: 531 FGGAFPAWVAPVQVKVIPVSNAVHVQYADEVADKLAQAGVRVERDMRDEKLGYKIREAQM 590

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +K+P +++ GDKE    ++ +R++G   +  + L   +  +  E
Sbjct: 591 QKVPYVLVIGDKEMENGAVNVRKYGEEKSDVIELDMFVESIKVE 634


>gi|198284332|ref|YP_002220653.1| threonyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC
           53993]
 gi|218666034|ref|YP_002426993.1| threonyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC
           23270]
 gi|259516307|sp|B7J7T0|SYT_ACIF2 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|259516338|sp|B5EN57|SYT_ACIF5 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|198248853|gb|ACH84446.1| threonyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC
           53993]
 gi|218518247|gb|ACK78833.1| threonyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC
           23270]
          Length = 644

 Score =  669 bits (1726), Expect = 0.0,   Method: Composition-based stats.
 Identities = 284/646 (43%), Positives = 410/646 (63%), Gaps = 18/646 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP    +  PDGS + F    TG  +A +I   LA+ AVA+ ++G + DLS  + ++  +
Sbjct: 1   MPD---IQLPDGSHRQFAEPVTGLTLARAIGSGLARAAVAMRVDGILKDLSAVLDQDAEV 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            I+T +    L VIRHS AH++A+AVQS++PE QV IGP+I++GFYYDF   + F+ ++L
Sbjct: 58  AIVTRDSADGLEVIRHSTAHLLAQAVQSLYPEAQVTIGPVIDNGFYYDFAFPRGFTPEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IE +M  ++  + P  ++ LS E A  LFE   E YKVEI+ +IP  E ++LYRQG++
Sbjct: 118 EAIEARMHALVKENLPVQREMLSREDAIALFEKMGEDYKVEIIRAIPRGEPLSLYRQGDF 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV STG +  F KL +VAGAYWRGDS  PML RIYGTAW  Q++L  YL  L 
Sbjct: 178 VDLCRGPHVPSTGVLGAF-KLQRVAGAYWRGDSRNPMLQRIYGTAWAQQKDLDAYLQQLA 236

Query: 240 ESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTP 297
           E+EKRDHR++  E++LF I ED G G++FWH  G ++ + +  + +   ++  Y+ + TP
Sbjct: 237 EAEKRDHRRIGTELELFSIQEDAGGGLVFWHPMGSRVRRVIEDFWKEAHVEAGYDLLYTP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +  + LW  SGH D Y  +MF          + + + LKPMNCP H+ ++   L SYR+
Sbjct: 297 HIAHEQLWYTSGHKDFYSESMFDPM-----QDEGQAYQLKPMNCPFHILIYKDKLHSYRD 351

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R AE G+VYR+E SG+LHGLMRVRGFTQDDAHVFC  +Q+  E   +  L+  I   
Sbjct: 352 LPIRWAELGTVYRHEMSGALHGLMRVRGFTQDDAHVFCRPDQIEAEIGAVLVLVRKILGT 411

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF++  + LSTRP   VGSD +WD A   ++  L+         +   V  G GAFYGP
Sbjct: 412 FGFDQYEINLSTRPGHSVGSDEIWDAATQALRNALERAG------LEYQVDAGGGAFYGP 465

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  ++DAIGR WQC T+Q+DFNLP RF   YV     +  P+M+HRA+FGSIERF G+
Sbjct: 466 KIDLKIQDAIGRKWQCSTVQLDFNLPERFAMEYVAEDGARKVPIMVHRAIFGSIERFFGV 525

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE+++G  P+WL+P+QA+V  I+    EYA+ ++++L    +  ETD RNE I YKIR 
Sbjct: 526 LIEHYEGKFPVWLAPVQAVVLPISEHYSEYAESVSDVLVKRGIRAETDLRNEKIGYKIRA 585

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           H+++++P +++ G++E    ++ +R         +S+      L K
Sbjct: 586 HTLRRVPYLLVVGEREKEAGTVAVRDRNGQDLGTLSIDAVGATLQK 631


>gi|328912917|gb|AEB64513.1| threonyl-tRNA synthetase [Bacillus amyloliquefaciens LL3]
          Length = 653

 Score =  669 bits (1726), Expect = 0.0,   Method: Composition-based stats.
 Identities = 262/653 (40%), Positives = 414/653 (63%), Gaps = 20/653 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M   I +TFPDG++K FP  +T  D+A SIS  L KK++A  +NG+  DL  P+  +G++
Sbjct: 11  MSDMINITFPDGAVKEFPKGSTTEDIAASISPGLKKKSLAGKLNGQEIDLRTPIQEDGAV 70

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT      L ++RHS AH++A+A++ I+ +V+  +GP+IE+GFYYD + EQ  + D+L
Sbjct: 71  EIITEGTEEGLNIMRHSTAHLLAQAIKRIYKDVKFGVGPVIENGFYYDVEMEQALTPDDL 130

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IEK+M+ I+  + P +++ +S ++A+ +F    +  K+E+L++IP  E V++Y QGE+
Sbjct: 131 PKIEKEMKRIVGENLPIIRKEVSRDEAKSMFAEIGDNLKLELLDAIPEDETVSIYEQGEF 190

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRG HV STG++K+F KL+ +AGAYWRGDS   ML RIYGTA+  + +L ++L  LE
Sbjct: 191 FDLCRGVHVPSTGKIKEF-KLLSLAGAYWRGDSKNQMLQRIYGTAFFKKDDLKEHLRMLE 249

Query: 240 ESEKRDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTP 297
           E+++RDHRKL +E+ LF +  + G G+  W  KG  I + +  Y+  +++   YE + TP
Sbjct: 250 EAKERDHRKLGKELKLFANSQKVGQGLPLWLPKGATIRRVIERYIVDKELSLGYEHVYTP 309

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +  + L++ SGHW+ Y+  MF     D+      T  L+PMNCP H+ ++   + SYRE
Sbjct: 310 VLGSKDLYETSGHWEHYQDGMFPPMEMDN-----ETLVLRPMNCPHHMMIYKQDIHSYRE 364

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+  E ++   LI  +Y+D
Sbjct: 365 LPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEEFIRTVRLIQDVYED 424

Query: 418 FGFEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           FG      +LS R      K    D +W+ A++++K  +D I +      +     GE A
Sbjct: 425 FGLSDYTFRLSYRDPEDTEKYFDDDDMWNKAQSMLKAAMDEIGH------DYYEAEGEAA 478

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  +K AIG++    T+Q+DF LP RF+  YV    ++  PV+IHR V  ++ER
Sbjct: 479 FYGPKLDVQVKTAIGKEETLSTVQLDFLLPERFDLTYVGEDGKQHRPVVIHRGVVSTMER 538

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETIN 592
           F+  +IE  KG LP WL+P+Q  V  ++ S  ++YA+++   L+   L +E D R+E I 
Sbjct: 539 FVAFLIEEHKGALPTWLAPVQFQVIPVSPSVHLDYAKKVQERLQREGLRVELDSRDEKIG 598

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           YKIRE  ++KIP +++ GD+EA   ++ +R++G   ++ VSL D +     E+
Sbjct: 599 YKIREAQMQKIPYMLVVGDQEAENGAVNVRKYGEQKSETVSLDDFVKKAVAEA 651


>gi|228965357|ref|ZP_04126449.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228794347|gb|EEM41861.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str.
           T04001]
          Length = 640

 Score =  669 bits (1725), Expect = 0.0,   Method: Composition-based stats.
 Identities = 275/644 (42%), Positives = 432/644 (67%), Gaps = 17/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEII 62
            I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N  + DL   + E   +EII
Sbjct: 5   MIEIKFPDGSVKEFVNGVTLEEIAGSISSSLKKKAVAGKVNDGLYDLRRNIEENAEVEII 64

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +    + + RHS AHI+A+AV+ ++ ++ + +GP+IE+GFYYD D     + ++L +I
Sbjct: 65  TIDSNEGVEIARHSAAHILAQAVKRLYGDINLGVGPVIENGFYYDMDLPSSVNIEDLRKI 124

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M++II  +    +  +S E+A +LF+   ++ K+E+LE+IP+ E+VTLY+QGE+ DL
Sbjct: 125 EKEMKKIINENIKIERVEVSREEAAKLFQEIDDSLKLELLEAIPSGESVTLYKQGEFVDL 184

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ STG +K F     V+GAYWRGDSN  +L RIYG A+++Q+EL +YL+F+EE+ 
Sbjct: 185 CRGPHLPSTGYLKAFQLTH-VSGAYWRGDSNNQVLQRIYGVAFSSQKELEEYLHFVEEAA 243

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KR+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R  + + +Y+E+ TP +++
Sbjct: 244 KRNHRKLGSELELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMN 303

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           Q +W++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R
Sbjct: 304 QEVWERSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIR 357

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           + EFG V+R+E SG+L+GL+RVR F QDDAH+F T +Q+ +E   +   I  +YK FGFE
Sbjct: 358 MCEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPKQIEDEIKSVMAQIDYVYKTFGFE 417

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPE  +G D LW+ AE  ++ VL ++           +  G+GAFYGPK ++
Sbjct: 418 Y-EVELSTRPEDSMGDDKLWEQAEAALENVLQSLNY------KYRLNEGDGAFYGPKIDF 470

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+ R  QCGTIQ+DF +P +F+  Y++ +++K  PV+IHRAV GS++RF+ I+IE+
Sbjct: 471 HIKDALNRSHQCGTIQLDFQMPEKFDLNYIDENNDKKRPVVIHRAVLGSLDRFLAILIEH 530

Query: 542 FKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           F G  P W++P+Q  V  ++++   +Y  E+A+ L    + +E D R+E + YKIRE  +
Sbjct: 531 FGGAFPAWVAPVQVKVVPVSNAVHEQYCSEVAHKLAKAGVRVEQDARDEKLGYKIREAQM 590

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +K+P  ++ GDKE    ++ +R++G   ++ V+L   +  + +E
Sbjct: 591 QKVPYFLVIGDKEMESGAVNVRKYGEEKSEVVALDVFVARIEEE 634


>gi|145636075|ref|ZP_01791745.1| threonyl-tRNA synthetase [Haemophilus influenzae PittHH]
 gi|229844174|ref|ZP_04464315.1| threonyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
 gi|145270597|gb|EDK10530.1| threonyl-tRNA synthetase [Haemophilus influenzae PittHH]
 gi|229813168|gb|EEP48856.1| threonyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
          Length = 643

 Score =  669 bits (1725), Expect = 0.0,   Method: Composition-based stats.
 Identities = 292/647 (45%), Positives = 426/647 (65%), Gaps = 16/647 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  +VA+ I   LAK  +A  +NG+  D  D +  + ++EIIT +
Sbjct: 4   ITLPDGSQRQFDRPVSVLEVAQDIGAGLAKATIAGRVNGERRDACDVIEQDATLEIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ ++P+V++AIGP IE+GFYYD D ++  + +++  IEK+
Sbjct: 64  DEDGLEIIRHSCAHLLGHAIKQLFPDVKMAIGPTIENGFYYDVDLDRSLTQEDIDAIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K+ ++ ++AR+ FE + E YK+ IL E+I       LY   E+ D+CR
Sbjct: 124 MLELAKTNYDVVKKRVTWQEARDTFEKRGEPYKMAILDENIERTATPALYHHLEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +    + F KL KVAGAYWRGDS   ML RIYGTAW  +++L +YL  LEE+ KR
Sbjct: 184 GPHVPNMRFCQHF-KLQKVAGAYWRGDSKNKMLQRIYGTAWADKKQLAEYLTRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQH 303
           DHRK+ + +DL+H+ E+  G++FWH  GW IF+ L +++R K+ + DY+E+  P ++D+ 
Sbjct: 243 DHRKIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW +Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWQNYADLMFT------TQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+ +E      ++  IY  FGF  I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQIESEVTSCIKMVYDIYSTFGFTNI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPE R+GSD +WD      +         + + +   +  GEGAFYGPK E+ L
Sbjct: 417 AVKLSTRPENRIGSDEMWD------RAEAGLAAALAHNGLEYEIQEGEGAFYGPKIEFAL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D +GR+WQCGT+Q+DF LP R +A YV   + +  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 RDCLGREWQCGTVQLDFALPGRLDATYVAEDNSRKTPVMIHRAILGSIERFIGIITEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P QA+V  IT S  +Y Q++A  L    L ++TD RNE + +KIREH+++++
Sbjct: 531 GFFPAWLAPTQAVVMNITDSQADYVQKVAKQLSDVGLRVKTDLRNEKVGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDC 650
           P +++CGDKE +E  + +R          ++ +   IL  +    + 
Sbjct: 591 PYMLVCGDKEIAEGKVAVRTRKGADLGTFTVEEFAEILKNQVRSREL 637


>gi|82701621|ref|YP_411187.1| threonyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
 gi|123727233|sp|Q2YBS6|SYT_NITMU RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|82409686|gb|ABB73795.1| Ser-tRNA(Thr) hydrolase [Nitrosospira multiformis ATCC 25196]
          Length = 638

 Score =  669 bits (1725), Expect = 0.0,   Method: Composition-based stats.
 Identities = 317/640 (49%), Positives = 436/640 (68%), Gaps = 15/640 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +  PDGS + +    T  +VA SI   LA+ A+A  +NGK+ DLS  +  +  + IIT +
Sbjct: 4   VRLPDGSERVYEHSVTVGEVAASIGAGLARAALAGKVNGKLVDLSARIENDSDVAIITEK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHS AH++A AV+ ++PE QV IGP+IEDGFYYDF  ++PF+ ++LA IEK+
Sbjct: 64  DAEGLEIIRHSSAHLLAHAVKELFPEAQVTIGPVIEDGFYYDFSYKRPFTPEDLAAIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M EI  R+    +Q     +A   F+++ E YK +I+E+IP  E+V+LY QG + DLCRG
Sbjct: 124 MAEISTRNLKVERQVWDRSEAINFFKNQGEHYKAQIIEAIPGDEDVSLYSQGNFTDLCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +T ++K F KLMK+AGAYWRGDS+  ML RIYGTAW  + +   YL  LEE+EKRD
Sbjct: 184 PHVPATSRLKVF-KLMKLAGAYWRGDSHNEMLQRIYGTAWTNKDDQNAYLRRLEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHL 304
           HRKL +++ LFH+ E+  G++FWH KGW ++Q +  YMR     + Y EI TP VLD+ L
Sbjct: 243 HRKLGKQLGLFHLQEEAPGMVFWHPKGWVVWQQVEQYMRDIFRNNGYLEIRTPSVLDKGL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHW+++R NMF  +  D      R F++KPMNCPGHV VF  GLKSYR+LP+RLAE
Sbjct: 303 WERSGHWENFRENMFVTQAED------REFSVKPMNCPGHVQVFKQGLKSYRDLPLRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNEPSG+LHG+MRVR FTQDDAH+FCT+ Q+ +E ++  +L+  +Y DFGF  I+
Sbjct: 357 FGSCHRNEPSGALHGIMRVRAFTQDDAHIFCTESQVQDEAVQFIDLLQKVYNDFGFNDIL 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           VKLSTRP KRVGS+  WD AE  ++  L+         +   +  GEGAFYGPK E+ LK
Sbjct: 417 VKLSTRPAKRVGSEEQWDKAEEALRSALNH------KNLIWELQPGEGAFYGPKIEFSLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D+IGR WQCGT+Q+DF++P R  A +V   + +  PVM+HRA+ GS+ERFIGI+IEN  G
Sbjct: 471 DSIGRIWQCGTLQLDFSMPERLGAEFVAEDNSRQIPVMLHRAILGSLERFIGILIENHAG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
            LPLWLSP  A+V  I+    +YA+E+   L+   +    D RNE I YKIREHS++K+P
Sbjct: 531 ALPLWLSPDHAVVLNISEGQADYAREVTEELRRAGIRAYADLRNEKITYKIREHSLQKLP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
             II GDKE + + + +R    +   +++L   +  L +E
Sbjct: 591 YQIIVGDKEVAAQRVAVRTRSGSDLGQMTLPALVDRLKEE 630


>gi|153955810|ref|YP_001396575.1| threonyl-tRNA synthetase [Clostridium kluyveri DSM 555]
 gi|219856177|ref|YP_002473299.1| hypothetical protein CKR_2834 [Clostridium kluyveri NBRC 12016]
 gi|189083603|sp|A5N258|SYT_CLOK5 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|254783517|sp|B9E5W0|SYT_CLOK1 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|146348668|gb|EDK35204.1| ThrS [Clostridium kluyveri DSM 555]
 gi|219569901|dbj|BAH07885.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 637

 Score =  669 bits (1725), Expect = 0.0,   Method: Composition-based stats.
 Identities = 291/643 (45%), Positives = 417/643 (64%), Gaps = 16/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK++  +G            D+A  +S SL+KKA+   ++GKV +L+  + ++  +EI+
Sbjct: 1   MIKISLKNGKEIEVEKGLKVIDIAAKLSISLSKKALGAVVDGKVVELNYKINKDCKVEIL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T ED     ++RH+ +HI+A+A++ ++PEV++AIGP I+ GFYYD D E  F+ + L +I
Sbjct: 61  TFEDEEGKKILRHTASHILAQAIKRLYPEVKLAIGPAIDSGFYYDVDAEFSFTPELLEKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E KM EII  +    +  L  E+A +  E K E YKVE+++ +P    ++ Y+QG++ DL
Sbjct: 121 EGKMNEIIKENIKLERFELPREEAIKFMEEKNEPYKVELIKDLPEDSIISFYKQGDFVDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPHV STG+ K   KL+ +AGAYWRG+ N  ML RIYGT +  + +L  YL  +EE++
Sbjct: 181 CAGPHVPSTGRAK-AVKLLSIAGAYWRGNENNKMLQRIYGTVFEKKSDLQDYLKLMEEAK 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KRDHRKL +E+DLF I E+G G  F+H KG  I  TL ++ R    K DY EI TP +L+
Sbjct: 240 KRDHRKLGKELDLFSIHEEGPGFPFFHPKGMVIRNTLQNFWREMHYKADYSEIMTPIILN 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW +SGHWD Y+ NM+  K  D        +A+KPMNCPG + V+ + ++SYR+LP R
Sbjct: 300 EELWHRSGHWDHYKENMYFTKIDDG------NYAIKPMNCPGSILVYKNDIRSYRDLPKR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
            AE G V+R+E SG+LHGLMRVR FTQDDAH+F TK+ + +E +K+ +LI + YK FGFE
Sbjct: 354 YAEMGVVHRHEKSGALHGLMRVRCFTQDDAHIFVTKDDIADEIIKVIDLIDNFYKIFGFE 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPE  +GSD  W+ A   +K  L  +       ++  +  G+GAFYGPK ++
Sbjct: 414 YF-VELSTRPEDSMGSDEDWEAATEGLKNALKMVG------LDYKINEGDGAFYGPKIDF 466

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            LKD IGR WQCGT+Q+DF +P +F+  Y+ +  EK  PVMIHR VFGSIERFIGI+IE+
Sbjct: 467 HLKDCIGRTWQCGTVQLDFQMPEKFDLNYIGADGEKHRPVMIHRVVFGSIERFIGILIEH 526

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  P W++P+Q  V  IT +  +Y  E+A  LK +++ +E D RNE I YKIRE  + 
Sbjct: 527 YAGAFPAWIAPVQVQVMNITDAQADYVAEVAKTLKENNIRVECDIRNEKIGYKIREAQMH 586

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K+P +II GDKE  +++I +R         +SL D I  L +E
Sbjct: 587 KVPYMIILGDKEMKDKNISVRSRKEGDIGAMSLEDFILKLKEE 629


>gi|303230749|ref|ZP_07317496.1| threonine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
 gi|302514509|gb|EFL56504.1| threonine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
          Length = 636

 Score =  669 bits (1725), Expect = 0.0,   Method: Composition-based stats.
 Identities = 283/644 (43%), Positives = 416/644 (64%), Gaps = 16/644 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEI 61
           +D+K+  PDGS K +    T ++  + +S SLAKK +A  +NG++ DL + + +GS +  
Sbjct: 2   ADVKIILPDGSAKEYAAGTTLAEAVKKLSNSLAKKVLAANVNGELTDLREELVDGSEVAF 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +T E+      +RH+ +H+MA+AV+ +WPE ++AIGP I+ GFYYD D E   + ++L +
Sbjct: 62  LTFEEDGGKHTLRHTASHVMAQAVKRLWPEAKLAIGPAIDKGFYYDIDMEHTLTPEDLTK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK+M  I+  + P  K  +S ++A E F+SK E YKVE++E +P    ++ Y QG++ D
Sbjct: 122 IEKEMSRIVKENLPITKSVMSRQEAIEFFKSKNEDYKVELIEDLPEDAVISCYAQGDFVD 181

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LC GPHV STG+VK F KL  +AGAYWRGD    ML RIYGTA+  ++EL  YL+ LEE+
Sbjct: 182 LCAGPHVASTGKVKAF-KLQSIAGAYWRGDEKNKMLQRIYGTAFEKKEELDAYLHMLEEA 240

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
            KRDHRKL +E+ LF I E+G G  F+  KG  +   L ++ R    D +Y+EI TP +L
Sbjct: 241 AKRDHRKLGKELGLFVIKEEGPGFPFFLPKGMALRNELENFWREVHHDFEYDEIRTPIIL 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++HLW+ SGHWD YR NM+       TI D   +A+KPMNCPG + V+ + + SYR+LP+
Sbjct: 301 NKHLWETSGHWDHYRENMYT------TIIDDEEYAIKPMNCPGGILVYQNEMHSYRDLPL 354

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R AE G V+R+E SG+LHGL RVR FTQDDAHVF   EQM +E +K+  L   IY  FG 
Sbjct: 355 RYAELGLVHRHELSGALHGLFRVRAFTQDDAHVFMLPEQMQSELMKVIELFDRIYSQFGL 414

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           +   V+LST+P+  +G DA+W+ A   ++  ++         I+  +  G+GAFYGPK +
Sbjct: 415 KYH-VELSTKPDNAMGDDAIWEAATEALRNAIEA------KGIDYVINPGDGAFYGPKLD 467

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           Y ++D++GR WQCGTIQ+D NLP RFN  Y+    +K   +MIHRA FGS+ERFIGI+ E
Sbjct: 468 YHIEDSLGRTWQCGTIQLDMNLPERFNVEYIGEDGQKHRTIMIHRACFGSMERFIGILTE 527

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           ++ G  P W++P+Q  V  I+   V+YA ++A  ++  ++ +E D RNE I YKIR+  +
Sbjct: 528 HYAGAFPTWMAPVQVKVLPISEKHVKYANQLAKQMRHDYVRVEVDDRNEKIGYKIRQAQM 587

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +K+P +++ GDKE  + S+ +R+ G      V   +    +  E
Sbjct: 588 EKVPYMLVVGDKEMEDNSVNVRKHGGDELGTVPFDEFFNSIKIE 631


>gi|297538938|ref|YP_003674707.1| threonyl-tRNA synthetase [Methylotenera sp. 301]
 gi|297258285|gb|ADI30130.1| threonyl-tRNA synthetase [Methylotenera sp. 301]
          Length = 635

 Score =  669 bits (1725), Expect = 0.0,   Method: Composition-based stats.
 Identities = 315/646 (48%), Positives = 443/646 (68%), Gaps = 18/646 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP    +  PDGS ++F    T +DVA +I   LAK A+A  +NG + D S  + ++  +
Sbjct: 1   MPV---IRLPDGSERSFDAPVTVADVAMNIGAGLAKAALAGKVNGVLVDTSHLISQDAEL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT ++P  + VIRHS AH++A AV+ ++P+ QV IGP+IE+GF+YDF  ++ F+ ++L
Sbjct: 58  AIITDKNPEGVDVIRHSTAHLLAYAVKELFPDAQVTIGPVIENGFFYDFSYKRAFTPEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM E+  +D    ++ L  ++A + F+S  E YK EI+ SIPA E+V+LY +G +
Sbjct: 118 IAIEKKMVELAKKDEQVTRKVLPRDEAVDYFKSIGEHYKAEIIASIPAGEDVSLYTEGNF 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV +TG++K F KLMK+AGAYWRGDSN  ML R+YGTAW  ++EL  YL+ LE
Sbjct: 178 TDLCRGPHVPNTGKLKAF-KLMKLAGAYWRGDSNNEMLQRVYGTAWRNKEELEAYLFQLE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+EKRDHRKL +++D FH+ +D  G++FWH +GW I+Q +  YMR+  +D +Y+E+ TP 
Sbjct: 237 EAEKRDHRKLGKQLDYFHMQDDAPGMVFWHPRGWSIWQEVEQYMRKMFRDYNYQEVRTPT 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D+ LW++SGHW +YR  MF       T  + R +A+KPMNCPGHV +FN  L SYR+L
Sbjct: 297 IMDRTLWEKSGHWQNYREGMFV------TSSESRDYAVKPMNCPGHVQIFNSSLHSYRDL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+  E      ++   Y DF
Sbjct: 351 PLRLAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQVEAEVADFIKMLYKAYGDF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF  ++VKLSTRPEKR+G+DA WD AE  +   L        + ++     GEGAFYGPK
Sbjct: 411 GFNDVLVKLSTRPEKRIGTDADWDKAETSLANALKL------NNLDFEYQPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD++GR WQCGTIQ+D NLP R  A YV   + + HPVM+HRA+ GS+ERFIGI+
Sbjct: 465 IEFTLKDSLGRLWQCGTIQLDPNLPERLGAEYVAEDNSRKHPVMLHRAIVGSMERFIGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IEN+ G +PLWL+P+Q +V  I+ +  +Y +++  +LK + +  E D RNE I YKIREH
Sbjct: 525 IENYAGAMPLWLAPVQVMVLNISENQADYVRQVVEMLKKNGIRCEFDLRNEKITYKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           S++K+P +++ G++E     + +R         + +   I  L  E
Sbjct: 585 SMQKMPYLLVAGEREMQTGHVAVRTRKGEDLGSMPIEALIERLKAE 630


>gi|323484406|ref|ZP_08089772.1| hypothetical protein HMPREF9474_01523 [Clostridium symbiosum
           WAL-14163]
 gi|323402184|gb|EGA94516.1| hypothetical protein HMPREF9474_01523 [Clostridium symbiosum
           WAL-14163]
          Length = 645

 Score =  669 bits (1725), Expect = 0.0,   Method: Composition-based stats.
 Identities = 283/643 (44%), Positives = 405/643 (62%), Gaps = 15/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            +K+T  DGS+K +       D+A+ IS  LA+ A A  I+G+  DL   V ++  ++I+
Sbjct: 1   MMKITLKDGSVKEYENQMAVIDIAKDISEGLARMACAGEIDGETVDLRTIVCQDCRLDIL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   LA +RH+ +H+MA+AV+ ++P+ ++AIGP I DGFYYD D   P ++++L +I
Sbjct: 61  TAKDENGLAALRHTASHVMAQAVKRLYPDTKLAIGPSIADGFYYDVDPATPLTAEDLPKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M++II       +  LS E+A  L + K+E YKVE++E +P    ++ YRQGE+ DL
Sbjct: 121 ETEMKKIIKEGLALERFTLSREEAIALMKEKEEPYKVELIEDLPEDAEISFYRQGEFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPH+ +T  V K FKLM +AGAYWRG     ML+RIY TA+  ++EL  YL  +EE+ 
Sbjct: 181 CAGPHLMNTKGVGKAFKLMNLAGAYWRGSEKNKMLTRIYATAFAGKEELESYLRMMEEAR 240

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KRDHRKL RE+ LF + + G G  F+  KG ++  TL+ Y R+   K  Y EI+TP +L+
Sbjct: 241 KRDHRKLGRELGLFMMHDAGPGFPFFLPKGMELKNTLLEYWRQIHKKAGYVEISTPVILN 300

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHWD Y+ NM+       T+ D   +A+KPMNCPG V  +    +SYR+LP+R
Sbjct: 301 RKLWETSGHWDHYKDNMYT------TVIDEEDYAIKPMNCPGGVLAYASEPRSYRDLPLR 354

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           + E G V+R+E SG LHGLMRVR FTQDDAH+F T +Q+ +E   + +LI  +Y  FGF+
Sbjct: 355 MGELGLVHRHEKSGQLHGLMRVRCFTQDDAHIFMTPDQIKDEIKGVAHLINEVYSLFGFK 414

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPE  +GSD  W+ A   ++  LD +       ++  V  G+GAFYGPK ++
Sbjct: 415 YH-VELSTRPEDSMGSDEDWEMATEGLRLALDELG------LDYVVNEGDGAFYGPKIDF 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L+D+IGR WQCGTIQ+DF LP RF   Y  +  EK  P+MIHR  FGSIERFIGI+IE+
Sbjct: 468 HLEDSIGRTWQCGTIQLDFQLPQRFELEYTGADGEKHRPIMIHRVAFGSIERFIGILIEH 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           F G  P WL+P+Q  V  I+    +YA+ +   L+   +  E D R+E I YKIRE   +
Sbjct: 528 FAGAFPTWLAPVQVKVLPISDKYADYAKTVLEELEEAGIRAELDTRSEKIGYKIREAQTQ 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIP +++ G KE  E ++ +R   +      S    I  + KE
Sbjct: 588 KIPYMLVVGQKEEEEGNVSVRSRFAGDEGSDSTAGFIEKIKKE 630


>gi|218897336|ref|YP_002445747.1| threonyl-tRNA synthetase [Bacillus cereus G9842]
 gi|218542902|gb|ACK95296.1| threonyl-tRNA synthetase [Bacillus cereus G9842]
          Length = 640

 Score =  669 bits (1725), Expect = 0.0,   Method: Composition-based stats.
 Identities = 276/644 (42%), Positives = 432/644 (67%), Gaps = 17/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEII 62
            I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N  + DL   + E   +EII
Sbjct: 5   MIEIKFPDGSVKEFVNGVTLEEIAGSISSSLKKKAVAGKVNDGLYDLRRNIEENAEVEII 64

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +    + + RHS AHI+A+AV+ ++ ++ + +GP+IE+GFYYD D     + ++L +I
Sbjct: 65  TIDSNEGVEIARHSAAHILAQAVKRLYGDINLGVGPVIENGFYYDMDLPSSVNIEDLRKI 124

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M++II  +    +  +S E+A +LF+   ++ K+EILE+IP+ E+VTLY+QGE+ DL
Sbjct: 125 EKEMKKIINENIKIERVEVSREEAAKLFQEIDDSLKLEILEAIPSGESVTLYKQGEFVDL 184

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ STG +K F     V+GAYWRGDSN  +L RIYG A+++Q+EL +YL+F+EE+ 
Sbjct: 185 CRGPHLPSTGYLKAFQLTH-VSGAYWRGDSNNQVLQRIYGVAFSSQKELEEYLHFVEEAA 243

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KR+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R  + + +Y+E+ TP +++
Sbjct: 244 KRNHRKLGSELELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMN 303

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           Q +W++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R
Sbjct: 304 QEVWERSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIR 357

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           + EFG V+R+E SG+L+GL+RVR F QDDAH+F T +Q+ +E   +   I  +YK FGFE
Sbjct: 358 MCEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPKQIEDEIKSVMAQIDYVYKTFGFE 417

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPE  +G D LW+ AE  ++ VL ++           +  G+GAFYGPK ++
Sbjct: 418 Y-EVELSTRPEDSMGDDKLWEQAEAALENVLQSLNY------KYRLNEGDGAFYGPKIDF 470

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+ R  QCGTIQ+DF +P +F+  Y++ +++K  PV+IHRAV GS++RF+ I+IE+
Sbjct: 471 HIKDALNRSHQCGTIQLDFQMPEKFDLNYIDENNDKKRPVVIHRAVLGSLDRFLAILIEH 530

Query: 542 FKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           F G  P W++P+Q  V  ++++   +Y  E+A+ L    + +E D R+E + YKIRE  +
Sbjct: 531 FGGAFPAWVAPVQVKVVPVSNAVHEQYCSEVAHKLAKAGVRVEQDARDEKLGYKIREAQM 590

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +K+P  ++ GDKE    ++ +R++G   ++ V+L   +  + +E
Sbjct: 591 QKVPYFLVIGDKEMESGAVNVRKYGEEKSEVVALDVFVARIEEE 634


>gi|16079947|ref|NP_390773.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221310836|ref|ZP_03592683.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221315161|ref|ZP_03596966.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           NCIB 3610]
 gi|221324361|ref|ZP_03605655.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           SMY]
 gi|135175|sp|P18255|SYT1_BACSU RecName: Full=Threonyl-tRNA synthetase 1; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|143766|gb|AAA22864.1| (thrSv) (EC 6.1.1.3) [Bacillus subtilis]
 gi|1769999|emb|CAA99608.1| threonyl-tRNA-synthetase [Bacillus subtilis]
 gi|2293284|gb|AAC00362.1| threonine tRNA synthetase [Bacillus subtilis]
 gi|2635360|emb|CAB14855.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
          Length = 643

 Score =  669 bits (1725), Expect = 0.0,   Method: Composition-based stats.
 Identities = 257/653 (39%), Positives = 414/653 (63%), Gaps = 20/653 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M   +K+TFPDG++K F    T  D+A SIS  L KK++A  +NGK  DL  P+  +G++
Sbjct: 1   MSDMVKITFPDGAVKEFAKGTTTEDIAASISPGLKKKSLAGKLNGKEIDLRTPINEDGTV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT      L ++RHS AH++A+A++ I+ +V+  +GP+IE+GFYYD + ++  + ++L
Sbjct: 61  EIITEGSEEGLQIMRHSAAHLLAQAIKRIYKDVKFGVGPVIENGFYYDVEMDEAITPEDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IEK+M++I+  + P +++ +S E+A+  F    +  K+E+L++IP  E V++Y QGE+
Sbjct: 121 PKIEKEMKKIVNANLPIVRKEVSREEAKARFAEIGDDLKLELLDAIPEGETVSIYEQGEF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRG HV STG++K+F KL+ +AGAYWRGDS   ML R+YGTA+  + +L ++L  LE
Sbjct: 181 FDLCRGVHVPSTGKIKEF-KLLSLAGAYWRGDSKNQMLQRVYGTAFFKKADLEEHLRMLE 239

Query: 240 ESEKRDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTP 297
           E+++RDHRKL +E+ LF +  + G G+  W  KG  I + +  Y+  ++I   YE + TP
Sbjct: 240 EAKERDHRKLGKELKLFANSQKVGQGLPLWLPKGATIRRVIERYIVDKEISLGYEHVYTP 299

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +  + L++ SGHWD Y+  MF     D+      T  L+PMNCP H+ ++   + SYRE
Sbjct: 300 VLGSKELYETSGHWDHYQEGMFPPMEMDN-----ETLVLRPMNCPHHMMIYKQDIHSYRE 354

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+ +E ++   LI  +Y+D
Sbjct: 355 LPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKDEFIRTVRLIQDVYED 414

Query: 418 FGFEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           FG      +LS R      K    D +W+ A++++K  +D I +      +     GE A
Sbjct: 415 FGLSDYTFRLSYRDPEDTEKYFDDDEMWNKAQSMLKEAMDEIGH------DYYEAEGEAA 468

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  +K AIG++    T+Q+DF LP RF+  Y+    ++  PV+IHR V  ++ER
Sbjct: 469 FYGPKLDVQVKTAIGKEETLSTVQLDFLLPERFDLTYIGEDGKQHRPVVIHRGVVSTMER 528

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETIN 592
           F+  +IE  KG LP WL+P+Q  V  ++ +  ++YA+++   L+   L +E D R+E I 
Sbjct: 529 FVAFLIEEHKGALPTWLAPVQFQVIPVSPAVHLDYAKKVQERLQCEGLRVEVDSRDEKIG 588

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           YKIRE  ++KIP +++ GD+EA   ++ +R++G   ++ +SL + +     E+
Sbjct: 589 YKIREAQMQKIPYMLVVGDQEAENGAVNVRKYGEQNSETISLDEFVKKAVAEA 641


>gi|15895629|ref|NP_348978.1| threonyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|22654130|sp|Q97GK4|SYT_CLOAB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|15025373|gb|AAK80318.1|AE007736_8 Threonyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|325509777|gb|ADZ21413.1| threonyl-tRNA synthetase [Clostridium acetobutylicum EA 2018]
          Length = 637

 Score =  669 bits (1725), Expect = 0.0,   Method: Composition-based stats.
 Identities = 302/643 (46%), Positives = 413/643 (64%), Gaps = 16/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+T  DG +  F    T  DVA++IS  L KKA++  INGK  +L   + ++ ++EI+
Sbjct: 1   MIKVTLKDGKVMEFENTTTPGDVAKAISPGLYKKAISAKINGKRAELMTNIDKDCNLEIL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D      +RH+ +HI+A+A++ ++PE ++AIGP I+ GFYYD D +  F+ +  A+I
Sbjct: 61  TFDDEDGKWTLRHTASHILAQAIKRLYPEAKLAIGPAIDSGFYYDIDADFSFTEEMFAKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M +II  +    +  L  EKA E  E KKE YKVE+++ +P    ++ Y+QGE+ DL
Sbjct: 121 EKEMNKIIKENLKLERFELPREKAIEYMEEKKEPYKVELIKDLPEDAVISFYKQGEFVDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPHV ST +VK   KLM VAGAYWRG+    ML RIYGTA+  + +L  Y+  LEE++
Sbjct: 181 CAGPHVESTAKVK-VIKLMSVAGAYWRGNEKNKMLQRIYGTAFTKKADLDDYINMLEEAK 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KRDHRK+ +E+DLF + E+G G  F+H KG  +   L++Y R    K  Y+EI+TP +L+
Sbjct: 240 KRDHRKIGKELDLFTMHEEGPGFPFFHPKGMVLKNLLLNYWREVHDKAGYDEISTPIILN 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW QSGHWD Y+ NM+  K       D   +A+KPMNCPG + V+   + SYRELP++
Sbjct: 300 EALWHQSGHWDHYKENMYFTKI------DEADYAIKPMNCPGSILVYKDNIHSYRELPIK 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAE G V+R+E SG+LHGLMRVR F QDDAH+F TKEQ+  E L +  LI S YK FGFE
Sbjct: 354 LAEIGLVHRHEKSGALHGLMRVRCFNQDDAHIFMTKEQITEEILGVIKLIDSFYKVFGFE 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPE  +GSD  W+ A N +   L+         +   V  G+GAFYGPK ++
Sbjct: 414 Y-YVELSTRPEDSMGSDEDWEAATNGLINALNAAN------LEYIVNEGDGAFYGPKIDF 466

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            LKD IGR WQCGTIQ+DF +P RF+  Y+ +  EK  PVM+HR VFGSIERFIGI+IE+
Sbjct: 467 HLKDCIGRTWQCGTIQLDFQMPERFDINYIGADGEKHRPVMVHRVVFGSIERFIGILIEH 526

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  P WL+P+Q  V  IT S VEY   I+  LK   + +E D RNE I YKIRE  +K
Sbjct: 527 YAGAFPTWLAPVQVKVMNITDSQVEYVDAISEKLKEAGIRVEKDVRNEKIGYKIREAQLK 586

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K+P +I+ GDKE  E  I +R         +++ D I  +  E
Sbjct: 587 KVPYMIVIGDKEIKEGIISVRSRKEGDLGSMNIEDFIFRINAE 629


>gi|71083144|ref|YP_265863.1| threonyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1062]
 gi|123734387|sp|Q4FNH9|SYT_PELUB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|71062257|gb|AAZ21260.1| Threonyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1062]
          Length = 638

 Score =  669 bits (1725), Expect = 0.0,   Method: Composition-based stats.
 Identities = 333/638 (52%), Positives = 460/638 (72%), Gaps = 13/638 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDG+   FP   TG +VAE IS+SL+K+A  +++N ++ DLS  + ++ S++I T +
Sbjct: 4   ITLPDGNTIEFPNKVTGLEVAEKISKSLSKQATIISVNEELKDLSFVLDKDCSVKIFTSK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L  IRH  AHI A AVQ ++P  QV IGPIIE+GFYYDF +++PF+ D+L +IE K
Sbjct: 64  DKEGLETIRHDTAHITAMAVQELFPGTQVTIGPIIENGFYYDFSRKEPFTEDDLNKIENK 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+EI+ RD P  ++    +KA   F+ K E YK EI+ESIP  E+V++Y  G+W DLCRG
Sbjct: 124 MKEIVDRDVPTTREVWKRDKAISHFKDKGEIYKAEIIESIPQGEDVSIYFHGDWHDLCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PH+ STG++ K+FKL KV+GAYWRGDSN  ML RIYGT+W +Q++L +YL  +EE+EKRD
Sbjct: 184 PHLSSTGKIGKYFKLTKVSGAYWRGDSNNEMLQRIYGTSWASQKDLDEYLKRIEEAEKRD 243

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHL 304
           HRKL +EMDLFH  E+  G +FWH KGWK+FQ L++YMR R+ K  Y+E+NTP++LD+ L
Sbjct: 244 HRKLGKEMDLFHFREESPGSVFWHEKGWKLFQKLVAYMRARQEKAGYKEVNTPEILDRSL 303

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHW+ Y  +M+  +  D+ I     FA+KPMNCPGHV VFN GLKSYR+LP+R++E
Sbjct: 304 WEKSGHWEKYGEHMYTSQTPDEKI-----FAIKPMNCPGHVQVFNQGLKSYRDLPLRISE 358

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FG V+R EPSG+LHGL+RVR FTQDDAH+FCT++Q+ +ECL + NLI+ IYKD GFE ++
Sbjct: 359 FGKVHRYEPSGALHGLLRVRAFTQDDAHIFCTEDQITSECLIVTNLILDIYKDLGFEDVI 418

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +K S RP+ RVG D +WD AE  +   LD +K S   ++   +  GEGAFYGPK E++L+
Sbjct: 419 LKYSDRPDLRVGDDNVWDKAEKAL---LDAVKAS---KLQYTINKGEGAFYGPKIEFVLR 472

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           DAIGRDWQCGT+QVD NLP R +A +V+    K  PVM+HRA+FGS+ERFIGI+IEN+ G
Sbjct: 473 DAIGRDWQCGTLQVDLNLPGRLDASFVDKDGTKKIPVMLHRALFGSLERFIGILIENYAG 532

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P W++P+Q +V  I+     YA+E+   + +  +S E D +N  +NYKIREHS+ KIP
Sbjct: 533 KFPFWIAPLQVVVIPISEEFDSYAKEVNEKINNAGISSEVDLKNHNLNYKIREHSLSKIP 592

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +++ICG KE    S+ IRR  +   + + L   +   +
Sbjct: 593 LLLICGKKEVDSNSVTIRRLDTNKQENMELNLFLETFS 630


>gi|127512960|ref|YP_001094157.1| threonyl-tRNA synthetase [Shewanella loihica PV-4]
 gi|166225499|sp|A3QEK0|SYT_SHELP RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|126638255|gb|ABO23898.1| threonyl-tRNA synthetase [Shewanella loihica PV-4]
          Length = 642

 Score =  669 bits (1725), Expect = 0.0,   Method: Composition-based stats.
 Identities = 289/647 (44%), Positives = 419/647 (64%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS + F    +  DVA  I   LAK  +A  +NG++ D  D +  +  +
Sbjct: 1   MPV---ITLPDGSKREFANAVSTLDVAADIGPGLAKACIAGRVNGELKDACDLIETDVDL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   + ++RHSCAH++  A++ +WPE ++AIGP+I++GFYYD D +   + +++
Sbjct: 58  AIITVKDDEGVEILRHSCAHLLGHAIKQMWPETKMAIGPVIDNGFYYDVDLDHKLTEEDV 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
           A++EK+M  +   +   +K+ +S ++AR+ FES+ E+YK+ IL E+I   +   LY   E
Sbjct: 118 AELEKRMLALAKTNYDVVKRVVSWQEARDTFESRGESYKMAILDENISKDDQPALYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KLM VAGAYWRG+S+  ML RIYGTAW  ++ L  +L  L
Sbjct: 178 YTDMCRGPHVPNMKFCHHF-KLMSVAGAYWRGNSDNKMLQRIYGTAWADKKALKAHLTRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW +F  L  ++R+K+ +  Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWSLFLELERFIRQKLGQYTYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+
Sbjct: 297 LMMDRVLWERSGHWDKYSEAMFT------THSENREYAVKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFG  +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+  E      ++   Y  
Sbjct: 351 LPLRMAEFGCCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQVQQEVSGCIKMVYDTYAT 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF  I+VKLSTRPEKR+G DA+WD AE  +   L        + I   +L GEGAFYGP
Sbjct: 411 FGFHDIVVKLSTRPEKRIGDDAMWDRAEQALMDALKA------NDIEYEILPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+D+ LP R  A YV   + +  PVMIHRA+ GS+ERF+GI
Sbjct: 465 KIEFTLHDCLDRAWQCGTVQLDYALPGRLGATYVAEDNSRQTPVMIHRAILGSLERFLGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE + G  P WL+P+QA+V  IT    EY  E+  L K   +    D RNE I +KIRE
Sbjct: 525 LIEEYAGKFPTWLAPVQAVVMNITDKQSEYVDEVVKLFKDQGIRASKDLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H+++++P +++ GD+E   R + +R        K+ +     ++ ++
Sbjct: 585 HTLRRVPYLLVVGDQEMENREVAVRTRDGVDLGKIKIDQFAAMVKEQ 631


>gi|94495624|ref|ZP_01302204.1| threonyl-tRNA synthetase [Sphingomonas sp. SKA58]
 gi|94425012|gb|EAT10033.1| threonyl-tRNA synthetase [Sphingomonas sp. SKA58]
          Length = 665

 Score =  669 bits (1725), Expect = 0.0,   Method: Composition-based stats.
 Identities = 300/667 (44%), Positives = 428/667 (64%), Gaps = 21/667 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEII 62
            +K+T PDGS++      T +D+A +I   LAK A+A  ++G++ D+  P+ E + + ++
Sbjct: 1   MLKITLPDGSVREVAPGTTPADIAAAIGPGLAKAAIAARVDGELRDIGRPLEEDAHLALV 60

Query: 63  TPEDP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELA 120
           T ++   +L + RH  AH++AEAVQ+++P  Q+  GP  EDGFYYDF  K++PF+ ++L 
Sbjct: 61  TAKNEADALELARHDFAHVLAEAVQALFPGTQITFGPATEDGFYYDFAPKDRPFTEEDLP 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR----- 175
            IE +M++IIA D P  ++ +  +     +E+  E +K +    +P  E +T+Y      
Sbjct: 121 AIEAEMRKIIAADKPLKREVIDRDTLIAQWEAAGETFKAQWAAELPQGEELTVYHSGAPG 180

Query: 176 -QGEWFDLCRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQ 233
            +G W+D+CRGPH+ STG++  + F+L +V+GAYWRGD    MLSRIYGT W  +++L +
Sbjct: 181 SEGSWYDMCRGPHLASTGKLDPQAFRLTRVSGAYWRGDQKNAMLSRIYGTGWLNKKQLAE 240

Query: 234 YLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYE 292
           +L  LEE+ KRDHRKL  EMDLFH+ ++  G +FWH KG+ I++ L +YMRR I    Y 
Sbjct: 241 HLTRLEEAGKRDHRKLGAEMDLFHLQQEAHGSVFWHPKGYVIWRNLEAYMRRAIDDAGYR 300

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL--------RTFALKPMNCPGH 344
           E+ TPQV+D   W+QSGHW  YR NMF +      ++D            ALKPMNCP H
Sbjct: 301 EVKTPQVMDARQWEQSGHWGKYRENMFVIPDEVPNVEDEGPLVSDDADWMALKPMNCPAH 360

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           V +F  G+KSYR+LP+R  E G  +RNEP G+LHGLMRVR FTQDDAH+FC ++Q+  E 
Sbjct: 361 VLIFRQGIKSYRDLPLRFYENGCCHRNEPHGALHGLMRVRQFTQDDAHIFCREDQIVEEV 420

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
                L   IYKDFGF   + KL+ RPEKR G++ +WD AE  ++  +     ++ D   
Sbjct: 421 RAFCALADRIYKDFGFTYSI-KLALRPEKRFGTEEMWDKAEEELRNAVAAAGLNTPDY-G 478

Query: 465 TGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIH 524
              L GEGAFY PK E+ L DAIGR WQ GTIQ D  LP R +A Y+    E+  PVM+H
Sbjct: 479 WEELPGEGAFYAPKLEWHLTDAIGRTWQVGTIQSDRVLPERLDASYIGEDGERHRPVMLH 538

Query: 525 RAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIET 584
           RA+FGS ERFIGI+IE++ G  PLWL+P+QA+V TI S A +YA+   + L++  +  E 
Sbjct: 539 RAIFGSYERFIGILIEHYAGKFPLWLAPVQAVVATIVSDADDYAKATVDRLRAAGIRAEL 598

Query: 585 DFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           D RNE INYK+REHS+ K+P +++ G +EA E ++ +R  G      +SL D I  L KE
Sbjct: 599 DTRNEKINYKVREHSLAKVPNLLVVGRREADEGTVALRELGKDGQSVLSLDDVIARLEKE 658

Query: 645 SLPPDCQ 651
           + PPD +
Sbjct: 659 ASPPDMR 665


>gi|206971420|ref|ZP_03232370.1| threonyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|228952703|ref|ZP_04114777.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|229069894|ref|ZP_04203176.1| Threonyl-tRNA synthetase [Bacillus cereus F65185]
 gi|206733405|gb|EDZ50577.1| threonyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|228713297|gb|EEL65190.1| Threonyl-tRNA synthetase [Bacillus cereus F65185]
 gi|228806979|gb|EEM53524.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
          Length = 640

 Score =  669 bits (1725), Expect = 0.0,   Method: Composition-based stats.
 Identities = 277/644 (43%), Positives = 432/644 (67%), Gaps = 17/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEII 62
            I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N  + DL   + E   +EII
Sbjct: 5   MIEIKFPDGSVKEFVNGVTLEEIAGSISSSLKKKAVAGKVNDGLYDLRRNIEENAEVEII 64

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +    + + RHS AHI+A+AV+ ++ ++ + +GP+IE+GFYYD D     + ++L +I
Sbjct: 65  TIDSNEGVEIARHSAAHILAQAVKRLYGDINLGVGPVIENGFYYDMDLPSSVNIEDLRKI 124

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M++II  +    +  +S E+A +LF+   +  K+E+LE+IP+ E+VTLY+QGE+ DL
Sbjct: 125 EKEMKKIINENIKIERVEVSREEAAKLFQEMNDRLKLELLEAIPSGESVTLYKQGEFVDL 184

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ STG +K F     V+GAYWRGDSN  +L RIYG A+++Q+EL +YL+F+EE+ 
Sbjct: 185 CRGPHLPSTGYLKAFQLTH-VSGAYWRGDSNNQVLQRIYGVAFSSQKELEEYLHFVEEAA 243

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KR+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R  + +  Y+E+ TP +++
Sbjct: 244 KRNHRKLGSELELFMFSEEAPGMPFYLPKGQMIRNELEAFLREIQKEYKYQEVRTPFMMN 303

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           Q +W++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R
Sbjct: 304 QEVWERSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIR 357

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           + EFG V+R+E SG+L+GL+RVR F QDDAH+F T +Q+ +E   +   I  +YK FGFE
Sbjct: 358 MCEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPKQIEDEIKSVMAQIDYVYKTFGFE 417

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPE  +G D LW+ AE  ++ VL ++           +  G+GAFYGPK ++
Sbjct: 418 Y-EVELSTRPEDSMGDDKLWEQAEAALENVLQSLNY------KYRLNEGDGAFYGPKIDF 470

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+ R  QCGTIQ+DF +P +F+  Y++ ++EK  PV+IHRAV GS++RF+ I+IE+
Sbjct: 471 HIKDALNRSHQCGTIQLDFQMPEKFDLNYIDENNEKKRPVVIHRAVLGSLDRFLAILIEH 530

Query: 542 FKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           F G  P W++P+Q  V  ++++   +YA EIA+ L    + +E D R+E + YKIRE  +
Sbjct: 531 FGGAFPAWVAPVQVKVIPVSNAVHEQYANEIAHKLAQAGVRVEQDARDEKLGYKIREAQM 590

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +K+P +++ GDKE    ++ +R++G   ++ ++L   +  + +E
Sbjct: 591 QKVPYVLVIGDKEMENGAVNVRKYGEEKSEVIALDVFVATIEEE 634


>gi|168188008|ref|ZP_02622643.1| threonyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
 gi|169294168|gb|EDS76301.1| threonyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
          Length = 637

 Score =  669 bits (1725), Expect = 0.0,   Method: Composition-based stats.
 Identities = 299/643 (46%), Positives = 410/643 (63%), Gaps = 16/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            +K+T  DG +       T S++A  IS SL KKA+   ING+  +L D +  + ++EI 
Sbjct: 1   MVKITLKDGKVLEVEKGLTVSEIAARISTSLRKKALGAKINGEKAELMDVINEDSTLEIF 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T ED      +RH+ +HI+A+AV+ ++PEV++AIGP IE+GFYYDFD E  F+ + L +I
Sbjct: 61  TFEDQEGKDTLRHTASHILAQAVKRLYPEVKLAIGPSIENGFYYDFDAEFSFTPEILEKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M +I+  +    K   S E A E  + + E YKVE++E +P    ++ Y QG++ DL
Sbjct: 121 EKEMNKIVKENLQLKKFTKSREDAIEFMKERNEDYKVELIEDLPEDAVISFYEQGDFVDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPHV ST +VK   KL+ VAGAYWRG+ N  ML RIYGTA+  + EL +YL+ LEE++
Sbjct: 181 CAGPHVPSTKEVK-AIKLLSVAGAYWRGNENNKMLQRIYGTAFIKKSELEEYLHMLEEAK 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KRDHRKL RE+ LF + E+G G  F++ KG  +  TL +Y R    K  Y EI TP +L+
Sbjct: 240 KRDHRKLGRELGLFDLKEEGPGFPFFYPKGMILRNTLENYWREMHEKAGYGEIRTPIILN 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW QSGHWD Y+ NM+  K       D   +A+KPMNCPG + V+   L SYRELP+R
Sbjct: 300 EKLWHQSGHWDHYKENMYFTKI------DGEDYAIKPMNCPGSILVYKSDLHSYRELPIR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           L E G V+R+E SG+LHGLMRVR FTQDDAH+F TKEQ+ +E L +  +I + Y  FGFE
Sbjct: 354 LGELGLVHRHEYSGALHGLMRVRNFTQDDAHIFMTKEQITSEILGVIKMIDNFYSLFGFE 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPE  +GSD  W+ A N +   L+         +   +  G+GAFYGPK ++
Sbjct: 414 YF-VELSTRPEDSMGSDEEWEAATNGLVKALNEAG------LEYKINEGDGAFYGPKIDF 466

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L+D +GR WQCGTIQ+DF +P RF+  YV    EK  PVM HR +FGSIERFIGI+ E+
Sbjct: 467 HLRDCLGRTWQCGTIQLDFQMPERFDLSYVGPDGEKHRPVMAHRVIFGSIERFIGILTEH 526

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  P WL+P+Q  +  IT + VEY +EI   L    + +E D RNE I YKIRE  ++
Sbjct: 527 YAGAFPTWLAPVQVKIMNITDNQVEYCKEIQKALNESGIRVELDLRNEKIGYKIREAQLQ 586

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIP +++ GDKE +E +I +R         + L D I ++ KE
Sbjct: 587 KIPYMLVLGDKEMNENTIAVRARKQGDLGAMKLDDFIAMVRKE 629


>gi|308174589|ref|YP_003921294.1| threonyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|307607453|emb|CBI43824.1| threonyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|328554512|gb|AEB25004.1| threonyl-tRNA synthetase [Bacillus amyloliquefaciens TA208]
          Length = 643

 Score =  669 bits (1725), Expect = 0.0,   Method: Composition-based stats.
 Identities = 262/653 (40%), Positives = 414/653 (63%), Gaps = 20/653 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M   I +TFPDG++K FP  +T  D+A SIS  L KK++A  +NG+  DL  P+  +G++
Sbjct: 1   MSDMINITFPDGAVKEFPKGSTTEDIAASISPGLKKKSLAGKLNGQEIDLRTPIQEDGAV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT      L ++RHS AH++A+A++ I+ +V+  +GP+IE+GFYYD + EQ  + D+L
Sbjct: 61  EIITEGTEEGLNIMRHSTAHLLAQAIKRIYKDVKFGVGPVIENGFYYDVEMEQALTPDDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IEK+M+ I+  + P +++ +S ++A+ +F    +  K+E+L++IP  E V++Y QGE+
Sbjct: 121 PKIEKEMKRIVGENLPIIRKEVSRDEAKSMFAEIGDNLKLELLDAIPEDETVSIYEQGEF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRG HV STG++K+F KL+ +AGAYWRGDS   ML RIYGTA+  + +L ++L  LE
Sbjct: 181 FDLCRGVHVPSTGKIKEF-KLLSLAGAYWRGDSKNQMLQRIYGTAFFKKDDLKEHLRMLE 239

Query: 240 ESEKRDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTP 297
           E+++RDHRKL +E+ LF +  + G G+  W  KG  I + +  Y+  +++   YE + TP
Sbjct: 240 EAKERDHRKLGKELKLFANSQKVGQGLPLWLPKGATIRRVIERYIVDKELSLGYEHVYTP 299

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +  + L++ SGHW+ Y+  MF     D+      T  L+PMNCP H+ ++   + SYRE
Sbjct: 300 VLGSKDLYETSGHWEHYQDGMFPPMEMDN-----ETLVLRPMNCPHHMMIYKQDIHSYRE 354

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+  E ++   LI  +Y+D
Sbjct: 355 LPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEEFIRTVRLIQDVYED 414

Query: 418 FGFEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           FG      +LS R      K    D +W+ A++++K  +D I +      +     GE A
Sbjct: 415 FGLSDYTFRLSYRDPEDTEKYFDDDDMWNKAQSMLKAAMDEIGH------DYYEAEGEAA 468

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  +K AIG++    T+Q+DF LP RF+  YV    ++  PV+IHR V  ++ER
Sbjct: 469 FYGPKLDVQVKTAIGKEETLSTVQLDFLLPERFDLTYVGEDGKQHRPVVIHRGVVSTMER 528

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETIN 592
           F+  +IE  KG LP WL+P+Q  V  ++ S  ++YA+++   L+   L +E D R+E I 
Sbjct: 529 FVAFLIEEHKGALPTWLAPVQFQVIPVSPSVHLDYAKKVQERLQREGLRVELDSRDEKIG 588

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           YKIRE  ++KIP +++ GD+EA   ++ +R++G   ++ VSL D +     E+
Sbjct: 589 YKIREAQMQKIPYMLVVGDQEAENGAVNVRKYGEQKSETVSLDDFVKKAVAEA 641


>gi|228900981|ref|ZP_04065194.1| Threonyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
 gi|228858679|gb|EEN03126.1| Threonyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
          Length = 640

 Score =  669 bits (1725), Expect = 0.0,   Method: Composition-based stats.
 Identities = 276/644 (42%), Positives = 432/644 (67%), Gaps = 17/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEII 62
            I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N  + DL   + E   +EII
Sbjct: 5   MIEIKFPDGSVKEFVNGVTLEEIAGSISSSLKKKAVAGKVNDGLYDLRRNIEENAEVEII 64

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +    + + RHS AHI+A+AV+ ++ ++ + +GP+IE+GFYYD D     + ++L +I
Sbjct: 65  TIDSNEGVEIARHSAAHILAQAVKRLYGDINLGVGPVIENGFYYDMDLPSSVNIEDLRKI 124

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M++II  +    +  +S E+A +LF+   ++ K+EILE+IP+ E+VTLY+QGE+ DL
Sbjct: 125 EKEMKKIINENIKIERVEVSREEAAKLFQEIDDSLKLEILEAIPSGESVTLYKQGEFVDL 184

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ STG +K F     V+GAYWRGDSN  +L RIYG A+++Q+EL +YL+F+EE+ 
Sbjct: 185 CRGPHLPSTGYLKAFQLTH-VSGAYWRGDSNNQVLQRIYGVAFSSQKELEEYLHFVEEAA 243

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KR+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R  + + +Y+E+ TP +++
Sbjct: 244 KRNHRKLGSELELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMN 303

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           Q +W++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R
Sbjct: 304 QEVWERSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIR 357

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           + EFG V+R+E SG+L+GL+RVR F QDDAH+F T +Q+ +E   +   I  +YK FGFE
Sbjct: 358 MCEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPKQIEDEIKSVMAQIDYVYKTFGFE 417

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPE  +G D LW+ AE  ++ VL ++           +  G+GAFYGPK ++
Sbjct: 418 Y-EVELSTRPEDSMGDDKLWEQAEAALENVLQSLNY------KYRLNEGDGAFYGPKIDF 470

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+ R  QCGTIQ+DF +P +F+  Y++ +++K  PV+IHRAV GS++RF+ I+IE+
Sbjct: 471 HIKDALNRSHQCGTIQLDFQMPEKFDLNYIDENNDKKRPVVIHRAVLGSLDRFLAILIEH 530

Query: 542 FKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           F G  P W++P+Q  V  ++++   +Y  E+A+ L    + +E D R+E + YKIRE  +
Sbjct: 531 FGGAFPAWVAPVQVKVVPVSNAVHEQYCSEVAHKLAQAGVRVEQDARDEKLGYKIREAQM 590

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +K+P  ++ GDKE    ++ +R++G   ++ V+L   +  + +E
Sbjct: 591 QKVPYFLVIGDKEMESGAVNVRKYGEEKSEVVALDVFVARIEEE 634


>gi|239947855|ref|ZP_04699608.1| threonyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes
           scapularis]
 gi|241116864|ref|XP_002401645.1| threonyl-tRNA synthetase, putative [Ixodes scapularis]
 gi|215493189|gb|EEC02830.1| threonyl-tRNA synthetase, putative [Ixodes scapularis]
 gi|239922131|gb|EER22155.1| threonyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes
           scapularis]
          Length = 635

 Score =  668 bits (1724), Expect = 0.0,   Method: Composition-based stats.
 Identities = 325/644 (50%), Positives = 442/644 (68%), Gaps = 15/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            I ++FPDGSIK F  + T  +VA +IS SLAK+A+   ING++ DLS  +  +  + I+
Sbjct: 1   MINISFPDGSIKQFEKNITAYEVANAISMSLAKRAMVAEINGELKDLSTVIENDCKLRIL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +DP  L +IRH  AH+ AEAV+ ++PE QV IGP IE+G+YYDF +++PF++D+LA I
Sbjct: 61  TVKDPECLEIIRHDAAHLTAEAVKELFPETQVTIGPAIENGYYYDFARDKPFTTDDLAVI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E KMQE+  ++    ++    +KA E F+S  E YK EI+ SIPA E +TLYRQG++ DL
Sbjct: 121 EAKMQELSKKNEKVTRELWDRDKAVEFFKSIGEHYKAEIIASIPAGEPITLYRQGDFIDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPH  STG VK F KLMKVAGAYWRGDS   ML RIYGTAW T+++L  YL+ LEE+E
Sbjct: 181 CLGPHAPSTGFVKHF-KLMKVAGAYWRGDSCNEMLQRIYGTAWATKEQLDNYLFMLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD 301
           KRDHRKL RE+DLFH  E+  G++FWH KGW I+  +  Y+R+KI+ + Y E+ TP ++D
Sbjct: 240 KRDHRKLGRELDLFHFQEEAQGMVFWHDKGWSIYNIIEQYIRKKIRKNGYIEVKTPVLVD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW  +R +MFA++  D T       ALKPMNCP HV +F  G+KSYR+LP+R
Sbjct: 300 KSLWEASGHWKKFRDDMFALETDDKT------LALKPMNCPCHVQIFKQGIKSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           ++EFG  +RNE SG+LHGLMRVR   QDDAH+FC +EQ+ +E +    L+  +YKDFGF 
Sbjct: 354 MSEFGLCHRNEASGALHGLMRVRSLVQDDAHIFCAEEQITDETVSFCKLLTEVYKDFGFN 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            I VK S RPE R GSD +WD AEN +K  ++             +  GEGAFYGPK E+
Sbjct: 414 DIKVKFSDRPEIRAGSDEVWDKAENALKEAVEKAG------FTYTLNPGEGAFYGPKLEF 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
           +L DAIGR WQCGT+Q+DF LP R +A Y+ +  EK  PVM+HRA+ GS+ERFIGI+IE 
Sbjct: 468 VLTDAIGRQWQCGTLQMDFVLPERLDASYIAASGEKKRPVMLHRAILGSLERFIGILIEE 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  PLW++PIQ  V TITS   +YA E+   L  + +  + +   + INYKIRE S +
Sbjct: 528 YAGRFPLWITPIQVAVATITSDLNDYALEVQKALIDNGVRTDINISPDKINYKIREFSNQ 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           KIP+I + G +E   + + IRR G+T  + +S+   I ++ +E+
Sbjct: 588 KIPMIAVIGKQEKENKQVTIRRLGTTEQEVLSIEQLIALVKEEN 631


>gi|321312429|ref|YP_004204716.1| threonyl-tRNA synthetase [Bacillus subtilis BSn5]
 gi|291485328|dbj|BAI86403.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. natto BEST195]
 gi|320018703|gb|ADV93689.1| threonyl-tRNA synthetase [Bacillus subtilis BSn5]
          Length = 643

 Score =  668 bits (1724), Expect = 0.0,   Method: Composition-based stats.
 Identities = 257/653 (39%), Positives = 414/653 (63%), Gaps = 20/653 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M   +K+TFPDG++K F    T  D+A SIS  L KK++A  +NGK  DL  P+  +G++
Sbjct: 1   MSDMVKITFPDGAVKEFAKGTTTEDIAASISPGLKKKSLAGKLNGKEIDLRTPINEDGTV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT      L ++RHS AH++A+A++ I+ +V+  +GP+IE+GFYYD + ++  + ++L
Sbjct: 61  EIITEGSEEGLQIMRHSTAHLLAQAIKRIYKDVKFGVGPVIENGFYYDVEMDEAITPEDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IEK+M++I+  + P +++ +S E+A+  F    +  K+E+L++IP  E V++Y QGE+
Sbjct: 121 PKIEKEMKKIVNANLPIVRKEVSREEAKARFAEIGDDLKLELLDAIPEGETVSIYEQGEF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRG HV STG++K+F KL+ +AGAYWRGDS   ML R+YGTA+  + +L ++L  LE
Sbjct: 181 FDLCRGVHVPSTGKIKEF-KLLSLAGAYWRGDSKNQMLQRVYGTAFFKKADLEEHLRMLE 239

Query: 240 ESEKRDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTP 297
           E+++RDHRKL +E+ LF +  + G G+  W  KG  I + +  Y+  ++I   YE + TP
Sbjct: 240 EAKERDHRKLGKELKLFANSQKVGQGLPLWLPKGATIRRVIERYIVDKEISLGYEHVYTP 299

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +  + L++ SGHWD Y+  MF     D+      T  L+PMNCP H+ ++   + SYRE
Sbjct: 300 VLGSKELYETSGHWDHYQEGMFPPMEMDN-----ETLVLRPMNCPHHMMIYKQDIHSYRE 354

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+ +E ++   LI  +Y+D
Sbjct: 355 LPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKDEFIRTVRLIQDVYED 414

Query: 418 FGFEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           FG      +LS R      K    D +W+ A++++K  +D I +      +     GE A
Sbjct: 415 FGLSDYTFRLSYRDPEDTEKYFDDDEMWNKAQSMLKEAMDEIGH------DYYEAEGEAA 468

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  +K AIG++    T+Q+DF LP RF+  Y+    ++  PV+IHR V  ++ER
Sbjct: 469 FYGPKLDVQVKTAIGKEETLSTVQLDFLLPERFDLTYIGEDGKQHRPVVIHRGVVSTMER 528

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETIN 592
           F+  +IE  KG LP WL+P+Q  V  ++ +  ++YA+++   L+   L +E D R+E I 
Sbjct: 529 FVAFLIEEHKGALPTWLAPVQFQVIPVSPAVHLDYAKKVQERLQREGLRVEVDSRDEKIG 588

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           YKIRE  ++KIP +++ GD+EA   ++ +R++G   ++ +SL + +     E+
Sbjct: 589 YKIREAQMQKIPYMLVVGDQEAENGAVNVRKYGEQNSETISLDEFVKKAVAEA 641


>gi|160871539|ref|ZP_02061671.1| threonyl-tRNA synthetase [Rickettsiella grylli]
 gi|159120338|gb|EDP45676.1| threonyl-tRNA synthetase [Rickettsiella grylli]
          Length = 642

 Score =  668 bits (1724), Expect = 0.0,   Method: Composition-based stats.
 Identities = 306/649 (47%), Positives = 447/649 (68%), Gaps = 17/649 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SI 59
           MP    +T PD   +    + T   VAE +   LAK A+A  ++G+  DL+ P+ +   +
Sbjct: 1   MPV---ITLPDAQQRTVANNTTVYHVAEQVGPGLAKAAIAAEVDGQFVDLTYPITKNIHL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            I+T  DP +L +IRHS AH++A AV+ ++P  QV +GP+IE+GFYYDF    PF+ ++L
Sbjct: 58  RIVTARDPEALTIIRHSTAHLLAHAVKQLFPMAQVTMGPVIENGFYYDFALSHPFTPEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEK+M+E++ +D P  +  L  ++A + F++  E YK EI+ +IP +E ++LYR+G++
Sbjct: 118 LNIEKRMRELVKQDIPIQRSTLPRDEAIQFFKALGEDYKAEIITAIPKEEVLSLYREGDF 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV STG++K F KL  VAGAYWRGD+   ML RIYGTAW T+++L ++LY L+
Sbjct: 178 VDLCRGPHVPSTGKLKVF-KLTHVAGAYWRGDAKNEMLQRIYGTAWLTEKDLNEHLYLLK 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+EKRDHRKL +++DLFH+ E+  G++FWH +GW ++Q +  Y+R  +K   Y+EI TPQ
Sbjct: 237 EAEKRDHRKLGKQLDLFHVQEEAPGMVFWHPRGWTVYQRIEQYIRSCLKKAAYQEIQTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L + LW++SGHWD +   MF       T+ +   FA+KPM+CPGH+ +FN G+KSYR+L
Sbjct: 297 LLARQLWEKSGHWDKFFKEMFT------TVTENTEFAIKPMSCPGHIQIFNQGIKSYRDL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFGS +RNEPSG+LHGL+RVRGF QDD H+FCT++Q+ +E     +L+ ++Y DF
Sbjct: 351 PLRLAEFGSCHRNEPSGALHGLLRVRGFVQDDGHIFCTEDQIQSEVSAFIDLLYNVYADF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF  +++KL+TRPE RVGS+A WD AE  +   LD      +  +      GEGAFYGPK
Sbjct: 411 GFNDVILKLATRPEARVGSNASWDKAEKALALALDA-----RKGLEWTYAHGEGAFYGPK 465

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD++ R WQCGT+QVDF++P R  A YVN   E+  PVM+HRA+ GSIERFIGI+
Sbjct: 466 IEFSLKDSLNRIWQCGTLQVDFSMPQRLGAEYVNERGERHVPVMLHRAILGSIERFIGIL 525

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE++ G+ PLWL+P Q ++ TIT     YA+EIA  L++  L ++ D RNE I++KIREH
Sbjct: 526 IEHYAGHFPLWLAPTQIVIMTITDKQHHYAKEIAQELEALALRVKLDLRNEKISFKIREH 585

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLP 647
           S++KIP  ++ GD+E + + + +RR    +   +S+      + +  +P
Sbjct: 586 SLQKIPYQLVIGDQEVASKQVTVRRQTGDSLGSMSVPKFYKEIRQAIVP 634


>gi|229167201|ref|ZP_04294942.1| Threonyl-tRNA synthetase [Bacillus cereus AH621]
 gi|228616239|gb|EEK73323.1| Threonyl-tRNA synthetase [Bacillus cereus AH621]
          Length = 639

 Score =  668 bits (1724), Expect = 0.0,   Method: Composition-based stats.
 Identities = 281/644 (43%), Positives = 435/644 (67%), Gaps = 17/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEII 62
            I++ FPDGS+K F    T  ++A +IS SL KKAVA  +N +  DL   + E   +EII
Sbjct: 5   MIEIKFPDGSVKEFVKGITLEEIAGAISSSLKKKAVAGKVNDQSFDLRRNIEESAKVEII 64

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +    + + RHS AHI+A+AV+ I+ +V + +GP+IE+GFYYD D +   + ++L +I
Sbjct: 65  TMDSDEGVKIARHSAAHILAQAVKRIYGDVNLGVGPVIENGFYYDMDLQSSVNVEDLPKI 124

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M+ II  +    +  +S E+A+ELF+   ++ K+E+LE+IP  E+VTLY+QGE+ DL
Sbjct: 125 EKEMKNIINENVKIERVEVSREEAKELFQEMNDSLKLELLEAIPNGESVTLYKQGEFVDL 184

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ STG +K F     V+GAYWRGDSN  +L RIYG A+++QQ+L +YL+F+EE+ 
Sbjct: 185 CRGPHLPSTGYLKAFQLSH-VSGAYWRGDSNNQVLQRIYGVAFSSQQKLEEYLHFVEEAA 243

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KR+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R  + + +Y+E+ TP +++
Sbjct: 244 KRNHRKLGSELELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQNEYNYQEVRTPFMMN 303

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           Q LW++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R
Sbjct: 304 QELWEKSGHWGHYKDNMYFSEV------DHKSFALKPMNCPGHMLMFKNKLHSYRELPIR 357

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           + EFG V+R+E SG+L+GL+RVR F QDDAH+F T EQ+ +E   +   I  +YK FGFE
Sbjct: 358 MCEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPEQIEDEIKSVLAQIDYVYKTFGFE 417

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPE  +G D LW+ AE  ++ VL ++           +  G+GAFYGPK ++
Sbjct: 418 Y-EVELSTRPEDSMGDDKLWEQAELALENVLQSLNY------KYRLNEGDGAFYGPKIDF 470

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+ R  QCGT+Q+DF +P +F+  Y++ ++EK  PV+IHRAV GS++RF+ I+IE+
Sbjct: 471 HIKDALNRSHQCGTVQLDFQMPEKFDLNYIDENNEKRRPVVIHRAVLGSLDRFLAILIEH 530

Query: 542 FKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           F G  PLW++P+Q  V  ++++  V+YA E+A+ L    + +E D R+E + YKIRE  +
Sbjct: 531 FGGAFPLWVAPVQVKVIPVSNAVHVQYANEVADKLAQAGIRVERDIRDEKLGYKIREAQM 590

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +K+P +++ GDKE    ++ +R++G   ++ + L   +  + +E
Sbjct: 591 QKVPYVLVIGDKEMESEAVNVRKYGEEKSEVIELDAFVESMKEE 634


>gi|229155963|ref|ZP_04284064.1| Threonyl-tRNA synthetase [Bacillus cereus ATCC 4342]
 gi|228627570|gb|EEK84296.1| Threonyl-tRNA synthetase [Bacillus cereus ATCC 4342]
          Length = 639

 Score =  668 bits (1724), Expect = 0.0,   Method: Composition-based stats.
 Identities = 279/644 (43%), Positives = 431/644 (66%), Gaps = 17/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEII 62
            I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N  + DL   + E   +EI+
Sbjct: 5   MIEIKFPDGSVKEFVKGITLEEIAGSISSSLKKKAVAGKVNDGLYDLRRNIEENAEVEIV 64

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +    + + RHS AHI+A+A++ I+  V + +GP+IE+GFYYD D     + ++L +I
Sbjct: 65  TIDSNEGVEIARHSAAHILAQAIKRIYGNVNLGVGPVIENGFYYDMDLPSSVNVEDLREI 124

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M++II  +    +  +S E+A +LF+   +  K+E+LE+IP++E+VTLY+QGE+ DL
Sbjct: 125 EKEMKKIINENIKIERVEVSREEAAKLFQEMNDHLKLELLEAIPSEESVTLYKQGEFVDL 184

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ STG +K F     V+GAYWRGDSN  +L RIYG A+++Q+EL +YL+F+EE+ 
Sbjct: 185 CRGPHLPSTGYLKAFQLTH-VSGAYWRGDSNNQVLQRIYGVAFSSQKELEEYLHFVEEAA 243

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KR+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R  + + +Y+E+ TP +++
Sbjct: 244 KRNHRKLGSELELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMN 303

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           Q +W++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R
Sbjct: 304 QEVWERSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIR 357

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           + EFG V+R+E SG+L+GL+RVR F QDDAH+F T EQ+ +E   +   I  +YK FGFE
Sbjct: 358 MCEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPEQIEDEIKSVMAQIDYVYKTFGFE 417

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPE  +G D LW+ AE  +  VL ++           +  G+GAFYGPK ++
Sbjct: 418 Y-EVELSTRPEDSMGDDKLWEQAEAALANVLHSLNY------KYRLNEGDGAFYGPKIDF 470

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+ R  QCGTIQ+DF +P +F+  Y++  +EK  PV+IHRAV GS++RF+ I+IE+
Sbjct: 471 HIKDALNRSHQCGTIQLDFQMPEKFDLNYIDEKNEKRRPVVIHRAVLGSLDRFLAILIEH 530

Query: 542 FKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           F G  P W++P+Q  V  ++++  V+YA EIA+ L    + +E D R+E + YKIRE  +
Sbjct: 531 FGGAFPAWVAPVQVKVIPVSNAVHVQYADEIADKLAQAGVRVERDVRDEKLGYKIREAQM 590

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +K+P +++ GDKE    ++ +R++G   ++ + L   +  + +E
Sbjct: 591 QKVPYVLVIGDKEMENGAVNVRKYGEEKSEVIELNGFVESIKEE 634


>gi|284006267|emb|CBA71503.1| threonyl-tRNA synthetase [Arsenophonus nasoniae]
          Length = 640

 Score =  668 bits (1723), Expect = 0.0,   Method: Composition-based stats.
 Identities = 291/647 (44%), Positives = 429/647 (66%), Gaps = 21/647 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP    +T PDGS + +    +  D+A  I   LAK  +A  +NG++ D +D + ++  +
Sbjct: 1   MPV---ITLPDGSQRQYEHAVSVMDIANDIGSGLAKACIAGRVNGELVDANDQINKDAQL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L +IRHSCAH++  A++ +WP  ++AIGPIIE+GFYYD D E   + ++L
Sbjct: 58  AIITSKDLEGLEIIRHSCAHLLGHAIKQLWPTTKMAIGPIIENGFYYDVDLEHALTQEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
            ++E++M E+  ++   +K+ +S ++AR+ F ++ E YKV+IL E+I   ++  LY   E
Sbjct: 118 EKLEQRMHELAEKNYDVIKKRVSWQEARDTFVARGEDYKVKILDENINKDDHPRLYYHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KL KVAGAYWRG+S+  ML RIYGTAW  +++L  YL  L
Sbjct: 178 YIDMCRGPHVPNMRFCHYF-KLQKVAGAYWRGNSDNKMLQRIYGTAWANKKQLAAYLLRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G+ FWH  GW IF+ L +++R K+ +  Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMAFWHNDGWVIFRELETFIRTKLNEYRYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW+++GHW++Y+ NMF       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 297 LMMDRILWEKTGHWENYKENMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT++Q+  E      +I  +Y  
Sbjct: 351 LPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEDQILTEVKSCIKMIYHVYAT 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI VKLSTRPEKR+G+DA WD AE+ +   L          I      GEGAFYGP
Sbjct: 411 FGFEKIAVKLSTRPEKRIGTDAQWDRAESDLAKAL--------GDIEFDYQPGEGAFYGP 462

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF+LPSR  A YV+ ++E+  PVMIHRAV GS+ERFIGI
Sbjct: 463 KIEFTLYDCLDRAWQCGTVQLDFSLPSRLGASYVDENNERQVPVMIHRAVLGSLERFIGI 522

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E + G  P WL+P+Q ++  IT +  ++ Q++   L +  + ++ D RNE I +KIRE
Sbjct: 523 LTEQYAGFFPTWLAPLQIVIINITDAQADFVQKVVKKLSNFGIRVKADLRNEKIGFKIRE 582

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H+++++P +++CGDKE     + +R           + +    +  E
Sbjct: 583 HTLRRVPYMLVCGDKEVESNQVSVRTRDGKDLGTFDVTEFAERVLDE 629


>gi|229044114|ref|ZP_04191800.1| Threonyl-tRNA synthetase [Bacillus cereus AH676]
 gi|229109806|ref|ZP_04239391.1| Threonyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|228673651|gb|EEL28910.1| Threonyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|228725227|gb|EEL76498.1| Threonyl-tRNA synthetase [Bacillus cereus AH676]
          Length = 640

 Score =  668 bits (1723), Expect = 0.0,   Method: Composition-based stats.
 Identities = 278/644 (43%), Positives = 432/644 (67%), Gaps = 17/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEII 62
            I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N  + DL   + E   +EII
Sbjct: 5   MIEIKFPDGSVKEFVKGITLEEIAGSISSSLKKKAVAGKVNDGLYDLRRNIEENAEVEII 64

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +    + + RHS AHI+A+AV+ ++ ++ + +GP+IE+GFYYD D     + ++L +I
Sbjct: 65  TIDSNEGVEITRHSAAHILAQAVKRMYGDINLGVGPVIENGFYYDMDLPSSVNVEDLRKI 124

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M++II  +    +  +S E+A +LF+   +  K+E+LE+IP+ E+VTLY+QGE+ DL
Sbjct: 125 EKEMKKIINENIKIERVEVSREEAAKLFQEMNDRLKLELLEAIPSGESVTLYKQGEFVDL 184

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ STG +K F     V+GAYWRGDSN  +L RIYG A+++Q+EL +YL+F+EE+ 
Sbjct: 185 CRGPHLPSTGYLKAFQLTH-VSGAYWRGDSNNQVLQRIYGVAFSSQKELEEYLHFVEEAT 243

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KR+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R  + + +Y+E+ TP +++
Sbjct: 244 KRNHRKLGNELELFMFSEEAPGMPFYLPKGQMIRNELEAFLREIQKEYNYQEVRTPFMMN 303

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           Q +W++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R
Sbjct: 304 QEVWERSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIR 357

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           + EFG V+R+E SG+L+GL+RVR F QDDAH+F T +Q+ NE   +   I  +YK FGFE
Sbjct: 358 MCEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPKQIENEIKSVMAQIDYVYKTFGFE 417

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPE  +G D LW+ AE  ++ VL ++           +  G+GAFYGPK ++
Sbjct: 418 Y-EVELSTRPEDSMGDDKLWEQAEAALENVLQSLNY------KYRLNEGDGAFYGPKIDF 470

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+ R  QCGTIQ+DF +P +F+  Y++ ++EK  PV+IHRAV GS++RF+ I+IE+
Sbjct: 471 HIKDALNRSHQCGTIQLDFQMPEKFDLNYIDENNEKKRPVVIHRAVLGSLDRFLAILIEH 530

Query: 542 FKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           F G  P W++P+Q  V  ++++   +YA EIA  L    + +E D R+E + YKIRE  +
Sbjct: 531 FGGAFPAWVAPVQVKVIPVSNAVHEQYANEIALKLAQAGVRVEQDARDEKLGYKIREAQM 590

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +K+P +++ GDKE    ++ +R++G   ++ ++L   +  + +E
Sbjct: 591 QKVPYVLVIGDKEMENGAVNVRKYGEEKSEVIALDVFVATIEEE 634


>gi|52143093|ref|YP_083736.1| threonyl-tRNA synthetase [Bacillus cereus E33L]
 gi|51976562|gb|AAU18112.1| threonine--tRNA ligase (threonyl-tRNA synthetase) [Bacillus cereus
           E33L]
          Length = 639

 Score =  668 bits (1723), Expect = 0.0,   Method: Composition-based stats.
 Identities = 277/644 (43%), Positives = 430/644 (66%), Gaps = 17/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEII 62
            I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N ++ DL   + E   +EII
Sbjct: 5   MIEINFPDGSVKEFVKGITLEEIAGSISNSLKKKAVAGKVNDELYDLRRNIEENAEVEII 64

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +    + + RHS AHI+A+AV+ ++ ++ + +GP+IE+GFYYD D     + ++L +I
Sbjct: 65  TIDSNEGVEIARHSAAHILAQAVKRLYGDINLGVGPVIENGFYYDMDLLSSVNVEDLRKI 124

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M+ II  +    +  +S E+A +LF+   +  K+E+LE+IP +E+VTLY+QGE+ DL
Sbjct: 125 EKEMKNIIKENVKIERVEVSREEAAKLFQEMNDRLKLELLEAIPDEESVTLYKQGEFVDL 184

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ STG +K F     V+GAYWRGDSN  +L RIYG A+++Q+ L +YL+F+EE+ 
Sbjct: 185 CRGPHLPSTGYLKAFQLTH-VSGAYWRGDSNNQVLQRIYGVAFSSQKALEEYLHFVEEAA 243

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KR+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R  + + +Y+E+ TP +++
Sbjct: 244 KRNHRKLGNELELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMN 303

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           Q +W++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R
Sbjct: 304 QEVWERSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIR 357

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           + EFG V+R+E SG+L+GL+RVR F QDDAH+F T EQ+ +E   +   I  +YK FGFE
Sbjct: 358 MCEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPEQIEDEIKSVMAQIDYVYKTFGFE 417

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPE  +G D LW+ AE  ++ VL ++           +  G+GAFYGPK ++
Sbjct: 418 Y-EVELSTRPEDSMGDDKLWEQAEASLENVLQSLNY------KYRLNEGDGAFYGPKIDF 470

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+ R  QCGTIQ+DF +P +F+  Y++  +EK  PV+IHRAV GS++RF+ I+IE+
Sbjct: 471 HIKDALNRSHQCGTIQLDFQMPEKFDLNYIDEKNEKRRPVVIHRAVLGSLDRFLAILIEH 530

Query: 542 FKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           F G  P W++P+Q  V  ++++  V+YA E+A+ L    + +E D R+E + YKIRE  +
Sbjct: 531 FGGAFPAWIAPVQVKVIPVSNAVHVQYADEVADKLAQAGVRVERDMRDEKLGYKIREAQM 590

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +K+P +++ GDKE    ++ +R++G   +  + L   +  + +E
Sbjct: 591 QKVPYVLVIGDKEMENGAVNVRKYGEEKSDVIELDMFVESIKEE 634


>gi|84501632|ref|ZP_00999804.1| Threonyl-tRNA synthetase, class IIa [Oceanicola batsensis HTCC2597]
 gi|84390253|gb|EAQ02812.1| Threonyl-tRNA synthetase, class IIa [Oceanicola batsensis HTCC2597]
          Length = 659

 Score =  668 bits (1723), Expect = 0.0,   Method: Composition-based stats.
 Identities = 323/664 (48%), Positives = 436/664 (65%), Gaps = 21/664 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           S I LTFPDG+ +  P   T + VA  IS SL KKA++  +NG   DL  P+  + S+ I
Sbjct: 2   SQITLTFPDGNTREVPQGITPAQVASDISTSLGKKAISATVNGAHFDLQWPIEKDASVAI 61

Query: 62  ITP-EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            T  +D ++L +IRH  AHIMA AVQ IWPEV+V IGP+ + G++YDFD+E+PF+ ++L 
Sbjct: 62  HTMQDDEQALELIRHDLAHIMARAVQEIWPEVKVTIGPVRDYGWFYDFDREEPFTPEDLG 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IE +M+EII        +  S ++A   +E   E YKVE++  IP  E + +Y  G+W 
Sbjct: 122 RIEARMKEIINARDAVRTEVWSRDQAIAHYEKTGEPYKVELVNRIPEGEPIRMYWHGDWQ 181

Query: 181 DLCRGPHVRSTGQ-VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           DLCRGPH++ TGQ     FKL  +AGAYW GDS+RPML RIYG A+  + +L  +L  LE
Sbjct: 182 DLCRGPHLQHTGQVPADAFKLTHIAGAYWLGDSSRPMLQRIYGIAFKNRNDLKAHLNMLE 241

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQ 298
           E+ KRDHRKL REM LFH+ E+  G +FWH  GW I+ TL  Y+RRK +   Y EINTPQ
Sbjct: 242 EAAKRDHRKLGREMGLFHMQEEAPGQVFWHPNGWTIYTTLQDYVRRKQRAGGYNEINTPQ 301

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTI-----------KDLRTFALKPMNCPGHVAV 347
           V+D+ LW+ SGHW+ Y+ +MF V+  +              +  R  ALKPMNCP HV V
Sbjct: 302 VVDRKLWEASGHWEKYQHHMFIVEVDESRDGEHDDAAAKSREHTRINALKPMNCPCHVQV 361

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
           FN GLKSYR+LP+RLAEFGS  R EPSG+LHG+MRVRGFTQDDAH+FCT+EQ+  EC + 
Sbjct: 362 FNQGLKSYRDLPLRLAEFGSCARFEPSGALHGIMRVRGFTQDDAHIFCTEEQIQEECARF 421

Query: 408 HNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGV 467
            + +  IY++ GF +  ++ +TRPEKRVG++  WD  E  ++  +    +      +  +
Sbjct: 422 IDFLADIYRELGFPEFEIRFATRPEKRVGTEESWDYVEGALENAIKATGH------DYVL 475

Query: 468 LLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAV 527
             G+GAFYGPK ++ L DAIGR WQCGT QVD NLP R +A Y+ +  E+  P M+HRAV
Sbjct: 476 EPGDGAFYGPKLDFYLTDAIGRVWQCGTFQVDPNLPERLDAGYIAADGERHRPFMLHRAV 535

Query: 528 FGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR 587
            GS ERFIGI+IEN  G LPLWL+P Q +V  I S A +Y +E+   L++  +  ETD R
Sbjct: 536 LGSFERFIGILIENHAGKLPLWLAPRQVVVAAIVSDADDYCREVVAKLQAAGIRAETDLR 595

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLP 647
           NE INYK+REHS+ K+P I+ CG KE  ER++ +R+ G   T   +L + +  L  E+ P
Sbjct: 596 NEKINYKVREHSVGKVPYILACGMKEVEERTVSVRKLGEKQTSGATLDEIVDRLRTEATP 655

Query: 648 PDCQ 651
           PD +
Sbjct: 656 PDQR 659


>gi|228985474|ref|ZP_04145631.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228774239|gb|EEM22648.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 639

 Score =  668 bits (1723), Expect = 0.0,   Method: Composition-based stats.
 Identities = 279/644 (43%), Positives = 431/644 (66%), Gaps = 17/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEII 62
            I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N  + DL   + E   +EI+
Sbjct: 5   MIEIKFPDGSVKEFVKGITLEEIAGSISSSLKKKAVAGKVNDGLYDLRRNIEENAEVEIV 64

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +    + + RHS AHI+A+A++ I+  V + +GP+IE+GFYYD D     + ++L +I
Sbjct: 65  TIDSNEGVEIARHSAAHILAQAIKRIYGNVNLGVGPVIENGFYYDMDLPSSVNVEDLREI 124

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M++II  +    +  +S E+A +LF+   +  K+E+LE+IP++E+VTLY+QGE+ DL
Sbjct: 125 EKEMKKIINENIKIERVEVSREEAAKLFQEMNDRLKLELLEAIPSEESVTLYKQGEFVDL 184

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ STG +K F     V+GAYWRGDSN  +L RIYG A+++Q+EL +YL+F+EE+ 
Sbjct: 185 CRGPHLPSTGYLKAFQLTH-VSGAYWRGDSNNQVLQRIYGVAFSSQKELEEYLHFVEEAA 243

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KR+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R  + + +Y+E+ TP +++
Sbjct: 244 KRNHRKLGSELELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMN 303

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           Q +W++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R
Sbjct: 304 QEVWERSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIR 357

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           + EFG V+R+E SG+L+GL+RVR F QDDAH+F T EQ+ +E   +   I  +YK FGFE
Sbjct: 358 MCEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPEQIEDEIKSVMAQIDYVYKTFGFE 417

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPE  +G D LW+ AE  +  VL ++           +  G+GAFYGPK ++
Sbjct: 418 Y-EVELSTRPEDSMGDDKLWEQAEAALANVLHSLNY------KYRLNEGDGAFYGPKIDF 470

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+ R  QCGTIQ+DF +P +F+  Y++  +EK  PV+IHRAV GS++RF+ I+IE+
Sbjct: 471 HIKDALNRSHQCGTIQLDFQMPEKFDLNYIDEKNEKRRPVVIHRAVLGSLDRFLAILIEH 530

Query: 542 FKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           F G  P W++P+Q  V  ++++  V+YA EIA+ L    + +E D R+E + YKIRE  +
Sbjct: 531 FGGAFPAWVAPVQVKVIPVSNAVHVQYADEIADKLAQAGVRVERDVRDEKLGYKIREAQM 590

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +K+P +++ GDKE    ++ +R++G   ++ + L   +  + +E
Sbjct: 591 QKVPYVLVIGDKEMENGAVNVRKYGEEKSEVIELNGFVESIKEE 634


>gi|320539025|ref|ZP_08038700.1| threonyl-tRNA synthetase [Serratia symbiotica str. Tucson]
 gi|320030958|gb|EFW12962.1| threonyl-tRNA synthetase [Serratia symbiotica str. Tucson]
          Length = 642

 Score =  668 bits (1723), Expect = 0.0,   Method: Composition-based stats.
 Identities = 286/647 (44%), Positives = 427/647 (65%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    ++ PDGS ++F    +  DVA  I   LAK  +A  +NG++ D  D ++ +  +
Sbjct: 1   MPV---ISLPDGSQRHFDYPISPLDVARDIGPGLAKACIAGRVNGELVDACDLIKSDAQL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L ++RHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D E+  + ++L
Sbjct: 58  AIITIKDAEGLEIMRHSCAHLLGHAIKQLWPDTKMAIGPVIDNGFYYDVDIERTLTQEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M  +  +D   +K+ +S ++A + F ++ E+YKV IL E+I   +   LY   E
Sbjct: 118 DLLEKRMHALADKDYDVIKKKVSWQEASDTFAARGESYKVAILDENIGHDDRPGLYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KL K +GAYWRGDS   ML RIYGTAW  +++L  YL  L
Sbjct: 178 YIDMCRGPHVPNMRFCHHF-KLQKTSGAYWRGDSKNKMLQRIYGTAWADKKQLNAYLQRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW +F+ L +++R K+K+  Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTVFRELEAFVRMKLKEYQYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW+++GHW++Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 297 FMMDRVLWEKTGHWENYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+ EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+  E      ++  +Y  
Sbjct: 351 LPLRMGEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQVRAEVNACIRMVYDVYAT 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF+KI VKLSTRPEKR+G+D +W  AE  +   L      +++ I     LGEGAFYGP
Sbjct: 411 FGFDKIAVKLSTRPEKRIGTDDMWTRAEEDLAAAL------TENGIPLEYQLGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF LP R +A YV+  +++  PVMIHRA+ GS+ERFIGI
Sbjct: 465 KIEFTLHDCLDRAWQCGTVQLDFFLPGRLSASYVSEDNDRVVPVMIHRAILGSMERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E + G  P W++P+Q +V  IT S  +Y Q++   L+   +  + D RNE I +KIRE
Sbjct: 525 LTEEYAGFYPTWIAPVQVVVMNITDSQSDYVQQVTKKLQDAGIRAKADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H+++++P +++CGDKE    ++ +R           + + +  L KE
Sbjct: 585 HTLRRVPYMLVCGDKEVEAGNVAVRTRRGKDLGSQDVNEVVNKLLKE 631


>gi|296502926|ref|YP_003664626.1| threonyl-tRNA synthetase [Bacillus thuringiensis BMB171]
 gi|296323978|gb|ADH06906.1| threonyl-tRNA synthetase [Bacillus thuringiensis BMB171]
          Length = 640

 Score =  668 bits (1723), Expect = 0.0,   Method: Composition-based stats.
 Identities = 278/644 (43%), Positives = 432/644 (67%), Gaps = 17/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEII 62
            I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N  + DL   + E   +EII
Sbjct: 5   MIEIKFPDGSVKEFVKGITLEEIAGSISSSLKKKAVAGKVNDGLYDLRRNIEENAEVEII 64

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +    + + RHS AHI+A+AV+ ++ ++ + +GP+IE+GFYYD D     + ++L +I
Sbjct: 65  TIDSNEGVEITRHSAAHILAQAVKRMYGDINLGVGPVIENGFYYDMDLPSSVNVEDLRKI 124

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M++II  +    +  +S E+A +LF+   +  K+E+LE+IP+ E+VTLY+QGE+ DL
Sbjct: 125 EKEMKKIINENIKIERVEVSREEAAKLFQEMNDRLKLELLEAIPSGESVTLYKQGEFVDL 184

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ STG +K F     V+GAYWRGDSN  +L RIYG A+++Q+EL +YL+F+EE+ 
Sbjct: 185 CRGPHLPSTGYLKAFQLTH-VSGAYWRGDSNNQVLQRIYGVAFSSQKELEEYLHFVEEAA 243

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KR+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R  + + +Y+E+ TP +++
Sbjct: 244 KRNHRKLGSELELFMFSEEAPGMPFYLPKGQMIRNELEAFLREIQKEYNYQEVRTPFMMN 303

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           Q +W++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R
Sbjct: 304 QEVWERSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIR 357

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           + EFG V+R+E SG+L+GL+RVR F QDDAH+F T +Q+ NE   +   I  +YK FGFE
Sbjct: 358 MCEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPKQIENEIKSVMAQIDYVYKTFGFE 417

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPE  +G D LW+ AE  ++ VL ++           +  G+GAFYGPK ++
Sbjct: 418 Y-EVELSTRPEDSMGDDKLWEQAEAALENVLQSLNY------KYRLNEGDGAFYGPKIDF 470

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+ R  QCGTIQ+DF +P +F+  Y++ ++EK  PV+IHRAV GS++RF+ I+IE+
Sbjct: 471 HIKDALNRSHQCGTIQLDFQMPEKFDLNYIDENNEKKRPVVIHRAVLGSLDRFLAILIEH 530

Query: 542 FKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           F G  P W++P+Q  V  ++++   +YA EIA  L    + +E D R+E + YKIRE  +
Sbjct: 531 FGGAFPAWVAPVQVKVIPVSNAVHEQYANEIALKLAQAGVRVEQDARDEKLGYKIREAQM 590

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +K+P +++ GDKE    ++ +R++G   ++ ++L   +  + +E
Sbjct: 591 QKVPYVLVIGDKEMENGAVNVRKYGEEKSEVIALDVFVATIEEE 634


>gi|290475547|ref|YP_003468435.1| threonine tRNA synthetase [Xenorhabdus bovienii SS-2004]
 gi|289174868|emb|CBJ81669.1| threonine tRNA synthetase [Xenorhabdus bovienii SS-2004]
          Length = 642

 Score =  668 bits (1723), Expect = 0.0,   Method: Composition-based stats.
 Identities = 293/647 (45%), Positives = 426/647 (65%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS + F    +  DVA  I   LAK  +A  +NG++ D  + +  + ++
Sbjct: 1   MPV---ITLPDGSQRQFEHAVSVMDVARDIGVGLAKACIAGRVNGELVDACELIETDANL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L +IRHSCAH++  AV+ +WP+ ++AIGP+I++GFYYD D ++  + +++
Sbjct: 58  AIITSKDENGLEIIRHSCAHLLGHAVKQLWPDTKMAIGPVIDNGFYYDVDLDRSLTQEDI 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M E+   D   +K+ +S ++ARE F ++ E YK++IL E+I   +   LY   E
Sbjct: 118 ELLEKRMLELAKTDYDVIKKKVSWQEAREAFAARGEEYKIQILDENISRDDYPGLYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KL K+AGAYWRG+S+  ML RIYGTAW  +++L  YL  L
Sbjct: 178 YMDMCRGPHVPNMRFCHHF-KLQKIAGAYWRGNSDNKMLQRIYGTAWADKKQLNAYLQRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G+ FWH  GW IF+ L ++ R K+K+  Y+E+  P
Sbjct: 237 EEASKRDHRKIGKQLDLYHMQEEAPGMAFWHNDGWTIFRELETFARVKLKEYHYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW+++GHW++Y+ +MF       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 297 FMMDRILWEKTGHWENYKEHMFT------TSSENREYCVKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT++Q+  E      +I  +Y  
Sbjct: 351 LPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEDQIHQEVSNCIKMIYDVYNT 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEK++VKLSTRPEKR+G++  WD+AE  +   L       Q  I      GEGAFYGP
Sbjct: 411 FGFEKVVVKLSTRPEKRIGTEKQWDEAEADLAEALK------QSGIEFEYQPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF+LP+R NA YV  ++E+  PVMIHRAV GS+ERFIGI
Sbjct: 465 KIEFTLYDCLDRAWQCGTVQLDFSLPARLNASYVGENNERKVPVMIHRAVLGSLERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E + G  P WL+P Q +V  IT     Y QE+   L+   +  + D RNE I +KIRE
Sbjct: 525 LTEEYAGFFPTWLAPQQVVVMNITDGQAGYVQELVKKLQDAGIRAKADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H+++++P +++CGDKE       +R         +++ + I  L  E
Sbjct: 585 HTLRRVPYMLVCGDKEVESGKTSVRTRRGKDLGSINVSEFIEKLLTE 631


>gi|253989346|ref|YP_003040702.1| threonyl-tRNA synthetase [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253780796|emb|CAQ83958.1| threonyl-tRNA synthetase [Photorhabdus asymbiotica]
          Length = 642

 Score =  668 bits (1723), Expect = 0.0,   Method: Composition-based stats.
 Identities = 289/647 (44%), Positives = 427/647 (65%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP    +T PDGS + F    +  DVA  I   LAK  +A  +NG++ D  + +  + ++
Sbjct: 1   MPV---ITLPDGSQRQFDRAVSVMDVACDIGPGLAKACIAGRVNGELVDTCELIDSDANL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L +IRHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D  +  + +++
Sbjct: 58  AIITSKDDAGLEIIRHSCAHLLGHAIKQLWPDTKMAIGPVIDNGFYYDVDLGRALTQEDI 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M E+  +D   +K+ +S ++AR+ F  + E YKV+IL E+I   ++  LY   E
Sbjct: 118 ELLEKRMLELAKKDYDVIKKKVSWQEARDTFVVRGEDYKVQILDENIGRDDHPGLYNHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KL KVAGAYWRG+SN  ML RIYGTAW+ +++L  YL  L
Sbjct: 178 YVDMCRGPHVPNMRFCHHF-KLQKVAGAYWRGNSNNKMLQRIYGTAWSDKKQLNTYLQRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G+ FWH  GW IF+ L +++R K+K+  Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMAFWHNDGWTIFRELETFVRTKLKEYQYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ +W+++GHW++Y  +MF       T  + R + +KPMNCPGH+ +FN GLKSYR+
Sbjct: 297 FMMDRVMWERTGHWENYNEHMFT------TSSENREYCVKPMNCPGHIQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT+EQ+  E      ++  +Y  
Sbjct: 351 LPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQIHREVSNCIKMVYDVYST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI+VKLSTRPEKR+G++  W+ AE  +   L       ++ +      GEGAFYGP
Sbjct: 411 FGFEKIVVKLSTRPEKRIGTEEQWNQAEESLAAALQ------ENGVQFEYQPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF+LPSR  A YV  ++E+  PVMIHRAV GS+ERFIGI
Sbjct: 465 KIEFTLHDCLDRAWQCGTVQLDFSLPSRLGASYVGENNERKVPVMIHRAVLGSLERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E + G  P W++P Q +V  IT    +Y QE+A   +   +  + D RNE I +KIRE
Sbjct: 525 LTEEYAGFFPTWIAPQQVVVMNITDGQADYVQELAKKFQESGIRAKADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H+++++P +++CG+KE     I +R         + + + I  L  E
Sbjct: 585 HTLRRVPYMLVCGEKEVESGKISVRTRRGKDLGSIDVNEFIEKLLIE 631


>gi|222095974|ref|YP_002530031.1| threonyl-tRNA synthetase [Bacillus cereus Q1]
 gi|221240032|gb|ACM12742.1| threonine--tRNA ligase (threonyl-tRNA synthetase) [Bacillus cereus
           Q1]
          Length = 639

 Score =  668 bits (1722), Expect = 0.0,   Method: Composition-based stats.
 Identities = 278/644 (43%), Positives = 428/644 (66%), Gaps = 17/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N  + DL   +     +EII
Sbjct: 5   MIEIKFPDGSVKEFVKGITLEEIAGSISNSLKKKAVAGKVNDGLYDLRRNIEGNAEVEII 64

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +    + + RHS AHI+A+A++ I+  V + +GP+IE+GFYYD D     + ++L +I
Sbjct: 65  TIDSNEGVEIARHSAAHILAQAIKRIYGNVNLGVGPVIENGFYYDMDLPSSVNVEDLRKI 124

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M+ II  +    +  +S E+A +LF+   +  K+E+LE+IP++E+VTLY+QGE+ DL
Sbjct: 125 EIEMKNIIKENLKIERVEVSREEAAKLFQEMNDRLKLELLEAIPSEESVTLYKQGEFVDL 184

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ STG +K F     V+GAYWRGDSN  +L RIYG A+++Q+EL +YL+F+EE+ 
Sbjct: 185 CRGPHLPSTGYLKAFQLTH-VSGAYWRGDSNNQVLQRIYGVAFSSQKELEEYLHFVEEAA 243

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KR+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R  + + +Y+E+ TP +++
Sbjct: 244 KRNHRKLGSELELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMN 303

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           Q +W++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R
Sbjct: 304 QEVWERSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIR 357

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           + EFG V+R+E SG+L+GL+RVR F QDDAH+F T EQ+ +E   +   I  +YK FGFE
Sbjct: 358 MCEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPEQIEDEIKSVMAQIDYVYKTFGFE 417

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPE  +G D LW+ AE  +  VL ++           +  G+GAFYGPK ++
Sbjct: 418 Y-EVELSTRPEDSMGDDKLWEQAEAALANVLHSLNY------KYRLNEGDGAFYGPKIDF 470

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+ R  QCGTIQ+DF +P +F+  Y++  +EK  PV+IHRAV GS++RF+ I+IE+
Sbjct: 471 HIKDALNRSHQCGTIQLDFQMPEKFDLNYIDEKNEKRRPVVIHRAVLGSLDRFLAILIEH 530

Query: 542 FKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           F G  P W++P+Q  +  ++++  V+YA EIA+ L    + +E D R+E + YKIRE  +
Sbjct: 531 FGGAFPAWVAPVQVKIIPVSNAVHVQYADEIADKLAQAGVRVERDVRDEKLGYKIREAQM 590

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +K+P +++ GDKE    ++ +R++G   ++ V L   +  + +E
Sbjct: 591 QKVPYVLVIGDKEMENGAVNVRKYGEEKSEVVELNGFVESMKEE 634


>gi|229190445|ref|ZP_04317445.1| Threonyl-tRNA synthetase [Bacillus cereus ATCC 10876]
 gi|228593058|gb|EEK50877.1| Threonyl-tRNA synthetase [Bacillus cereus ATCC 10876]
          Length = 640

 Score =  668 bits (1722), Expect = 0.0,   Method: Composition-based stats.
 Identities = 277/644 (43%), Positives = 432/644 (67%), Gaps = 17/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEII 62
            I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N  + DL   + E   +EII
Sbjct: 5   MIEIKFPDGSVKEFVNGVTLEEIAGSISSSLKKKAVAGKVNDGLYDLRRDIEENAEVEII 64

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +    + + RHS AHI+A+AV+ ++ ++ + +GP+IE+GFYYD D     + ++L +I
Sbjct: 65  TIDSNEGVEIARHSAAHILAQAVKRLYGDINLGVGPVIENGFYYDMDLPSSVNIEDLRKI 124

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M++II  +    +  +S E+A +LF+   +  K+E+LE+IP+ E+VTLY+QGE+ DL
Sbjct: 125 EKEMKKIINENIKIERVEVSREEAAKLFQEMNDRLKLELLEAIPSGESVTLYKQGEFVDL 184

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ STG +K F     V+GAYWRGDSN  +L RIYG A+++Q+EL +YL+F+EE+ 
Sbjct: 185 CRGPHLPSTGYLKAFQLTH-VSGAYWRGDSNNQVLQRIYGVAFSSQKELEEYLHFVEEAA 243

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KR+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R  + +  Y+E+ TP +++
Sbjct: 244 KRNHRKLGSELELFMFSEEAPGMPFYLPKGQMIRNELEAFLREIQKEYKYQEVRTPFMMN 303

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           Q +W++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R
Sbjct: 304 QEVWERSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIR 357

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           + EFG V+R+E SG+L+GL+RVR F QDDAH+F T +Q+ +E   +   I  +YK FGFE
Sbjct: 358 MCEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPKQIEDEIKSVMAQIDYVYKTFGFE 417

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPE  +G D LW+ AE  ++ VL ++           +  G+GAFYGPK ++
Sbjct: 418 Y-EVELSTRPEDSMGDDKLWEQAEAALENVLQSLNY------KYRLNEGDGAFYGPKIDF 470

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+ R  QCGTIQ+DF +P +F+  Y++ ++EK  PV+IHRAV GS++RF+ I+IE+
Sbjct: 471 HIKDALNRSHQCGTIQLDFQMPEKFDLNYIDENNEKKRPVVIHRAVLGSLDRFLAILIEH 530

Query: 542 FKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           F G  P W++P+Q  V  ++++   +YA EIA+ L    + +E D R+E + YKIRE  +
Sbjct: 531 FGGAFPAWVAPVQVKVIPVSNAVHEQYANEIAHKLAQAGVRVEQDARDEKLGYKIREAQM 590

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +K+P +++ GDKE    ++ +R++G   ++ ++L   +  + +E
Sbjct: 591 QKVPYVLVIGDKEMENGAVNVRKYGEEKSEVIALDVFVASIEEE 634


>gi|307294661|ref|ZP_07574503.1| threonyl-tRNA synthetase [Sphingobium chlorophenolicum L-1]
 gi|306879135|gb|EFN10353.1| threonyl-tRNA synthetase [Sphingobium chlorophenolicum L-1]
          Length = 660

 Score =  668 bits (1722), Expect = 0.0,   Method: Composition-based stats.
 Identities = 307/662 (46%), Positives = 425/662 (64%), Gaps = 16/662 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            +K+T PDGS++      T +D+A +I   LAK A+A  ++G++ D+  P+  +  + ++
Sbjct: 1   MLKITLPDGSVREVAPGTTPADIAAAIGPGLAKAAIAARVDGELRDIMRPLEADAQLALV 60

Query: 63  TPEDP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELA 120
           T  D   +L + RH  AHI+AEAVQ+++P  Q+  GP  +DGFYYDF  K++PF+ ++L 
Sbjct: 61  TGRDEADALELARHDFAHILAEAVQALFPGTQITFGPSTDDGFYYDFAPKDRPFTEEDLP 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG-EW 179
            IE KM+EIIA D P  ++    E     ++++ E +K E    +P  E +T+Y  G EW
Sbjct: 121 VIEAKMREIIAADKPLRREVWRREDLIARWQAEGETFKAEWATELPEGEELTVYWSGNEW 180

Query: 180 FDLCRGPHVRSTGQVKKF-FKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
            D+CRGPH+ STG++    FKL +V+GAYWRGD    MLSRIYGT W  +++L  +L  L
Sbjct: 181 LDMCRGPHLASTGKLDPAAFKLTRVSGAYWRGDQKNAMLSRIYGTGWLNRKQLDAHLTRL 240

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRKL  EMDLFH+ ++  G +FWH KG+ I++ L +YMRR I +  Y E+ TP
Sbjct: 241 EEAGKRDHRKLGAEMDLFHLQQEAHGSVFWHPKGYLIWRELEAYMRRAIDEAGYREVKTP 300

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL--------RTFALKPMNCPGHVAVFN 349
           QV+D   W+QSGHW  YR NMF +      ++D            ALKPMNCP H+ +F 
Sbjct: 301 QVMDARQWEQSGHWGKYRENMFVIPDEVPNVEDEGPLVSEAADWMALKPMNCPAHILIFK 360

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
            G+KSYR+LP+R  E G  +RNEP G+LHGLMRVR FTQDDAH+FC ++Q+  E      
Sbjct: 361 QGIKSYRDLPLRFYENGCCHRNEPHGALHGLMRVRQFTQDDAHIFCREDQIVEEVRAFCA 420

Query: 410 LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL 469
           L   IYKDFGF   + KL+ RPEKR G++ +WD AE  ++  +     ++ +      L 
Sbjct: 421 LADRIYKDFGFTYSI-KLALRPEKRFGTEEMWDKAEEELRNAVAAAGLNTPEY-GWEELP 478

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG 529
           GEGAFY PK E+ L DAIGR WQ GTIQ D  LP R +A YV    E+  PVM+HRA+FG
Sbjct: 479 GEGAFYAPKLEWHLTDAIGRTWQVGTIQSDRVLPERLDASYVGEDGERHRPVMLHRAIFG 538

Query: 530 SIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE 589
           S ERFIGI+IE++ G  PLWL+P+QA+V TI S A +YAQ +A  L++  +  ETD RNE
Sbjct: 539 SYERFIGILIEHYAGKFPLWLAPVQAVVATIVSDADDYAQTVAEKLRAVGIRAETDVRNE 598

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPD 649
            INYK+REHS+ K+P +++ G +EA E ++ +R  G      +S+ D I  L KES  PD
Sbjct: 599 KINYKVREHSLAKVPNLLVVGRREADEGTVALRELGKEGQTILSVEDVIARLAKESQAPD 658

Query: 650 CQ 651
            Q
Sbjct: 659 MQ 660


>gi|254282289|ref|ZP_04957257.1| threonyl-tRNA synthetase [gamma proteobacterium NOR51-B]
 gi|219678492|gb|EED34841.1| threonyl-tRNA synthetase [gamma proteobacterium NOR51-B]
          Length = 643

 Score =  668 bits (1722), Expect = 0.0,   Method: Composition-based stats.
 Identities = 311/646 (48%), Positives = 422/646 (65%), Gaps = 18/646 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP    +T PDGS + F    +  +VA  I   LAK A+A  ++G+  D S  +  + ++
Sbjct: 1   MPV---ITLPDGSERRFDRPVSVHEVAADIGPGLAKAALAGVVDGEPRDTSHVIADDAAL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            I+T  D   + ++RHS AH++A+A Q ++P+ QV IGP +EDGFYYDF  E  F+ ++L
Sbjct: 58  SIVTERDEAGVEILRHSTAHLLAQATQQLFPDTQVTIGPTVEDGFYYDFATEHRFTPEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IE +M EI+A+D P  +   S E+A +LF    E +KV+I+E +P  E ++LYRQGEW
Sbjct: 118 EKIEARMAEIVAQDLPVERVVCSREEAAKLFAEMGEHFKVQIVEDLPEGEEISLYRQGEW 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV STG++K F KL KVAGAYWRGD++   L R+YGTAW  ++ L  YL  + 
Sbjct: 178 VDLCRGPHVPSTGKIKAF-KLTKVAGAYWRGDASNEQLQRVYGTAWANKKALKAYLNRIA 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQ 298
           E+EKRDHRK+A+++ LFH+ E+  G++FWH  GW I+QT+  YMR + +   YEEI TPQ
Sbjct: 237 EAEKRDHRKIAKKLGLFHLQEEAPGMVFWHPAGWVIYQTIERYMREQQLAYGYEEIKTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D  LWQ+SGH D +   MF +K       D R FA+KPMNCP H+ VFN GLKSYR+L
Sbjct: 297 LVDYSLWQRSGHADKFADGMFMLK------SDERDFAVKPMNCPCHIQVFNQGLKSYRDL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFGS +RNEPSGSLHG+MRVRGF QDDAH+FCT++Q+  E     +++  +Y DF
Sbjct: 351 PLRLAEFGSCHRNEPSGSLHGIMRVRGFVQDDAHIFCTEDQIQGEVGDFIDMLHDVYADF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF +++ +LSTRPE+RVGSDA WD      +      K      +    L GEGAFYGPK
Sbjct: 411 GFSEVIYRLSTRPEQRVGSDADWD------RAEAALAKALDAKSLPWEELPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD IGR WQ GTIQVDF++P R +A YV     +  PVM+HRAV GS ERFIGI+
Sbjct: 465 IEFSLKDCIGRVWQLGTIQVDFSMPGRLDAQYVAEDGSRKVPVMLHRAVLGSFERFIGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+F+G  P WLSP QA++  IT    +YA  +   LK++      D RNE I +KIRE 
Sbjct: 525 IEHFEGEFPTWLSPQQAVIVNITDKHADYALSVQETLKNNGFRAVCDLRNEKIGFKIREL 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            +KK P II+ GD+E    ++ +R         + L   +  LT +
Sbjct: 585 EMKKTPYIIVVGDQEVESATVSVRARHGRDLGSMDLDSLVTTLTDD 630


>gi|294501489|ref|YP_003565189.1| threonyl-tRNA synthetase [Bacillus megaterium QM B1551]
 gi|294351426|gb|ADE71755.1| threonyl-tRNA synthetase [Bacillus megaterium QM B1551]
          Length = 645

 Score =  668 bits (1722), Expect = 0.0,   Method: Composition-based stats.
 Identities = 263/655 (40%), Positives = 428/655 (65%), Gaps = 22/655 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           M   IK+TFPDG++K +   ++  D+A SIS  L KKA+A  +NG++ DL  P+  +GS+
Sbjct: 1   MSEVIKMTFPDGAVKEYSKGSSTEDIAASISPGLKKKALAGKVNGELLDLRTPIEQDGSL 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE--VQVAIGPIIEDGFYYDFDKEQPFSSD 117
           EIIT + P +L ++RHS AH+MA+A++ ++ +  VQ+ +GP+IE+GFYYD D E+  + +
Sbjct: 61  EIITQDAPEALEIMRHSTAHLMAQAIKRLYKDTKVQLGVGPVIENGFYYDIDMEESITPE 120

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +L +IEK+M++I+  +    ++ +S E+A +LF+   +  K+E++++IPA E VT+Y+QG
Sbjct: 121 DLGKIEKEMKKIVNSNIEIERKEVSREEAIQLFKEVGDELKLELIDAIPAGEKVTIYQQG 180

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           E+FDLCRG HV STG++K+F KL+ VAGAYWRGDS+  ML RIYGTA+ T+ +L ++L  
Sbjct: 181 EFFDLCRGVHVPSTGKIKEF-KLLSVAGAYWRGDSDNQMLQRIYGTAFFTKADLDEHLRL 239

Query: 238 LEESEKRDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEIN 295
           LEE+++RDHRKL +E++LF +  + G G+  W  KG  I + +  Y+  +++   Y+ + 
Sbjct: 240 LEEAKERDHRKLGKELNLFTNSQKVGQGLPLWLPKGATIRRIIERYIVDKEVSLGYQHVY 299

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP +    L++ SGHW+ Y+ +MF     D+         L+PMNCP H+ V+  G+ SY
Sbjct: 300 TPVLGSVELYKTSGHWEHYQDDMFPAMEMDN-----EDLVLRPMNCPHHMMVYKQGIHSY 354

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+  E +++  L+ ++Y
Sbjct: 355 RELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEEFIRVVRLVEAVY 414

Query: 416 KDFGFEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
           KDFGFE    +LS R      K    DA+W+ A++++K  +D +       ++     GE
Sbjct: 415 KDFGFENYSFRLSYRDPADTEKYFDDDAMWEKAQSMLKDAMDEL------DLDYYEAEGE 468

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
            AFYGPK +  +K A+G++    T+Q+DF LP RF+  Y+    ++  PV+IHR V  ++
Sbjct: 469 AAFYGPKLDVQVKTALGKEETLSTVQLDFLLPERFDLTYIGEDGKQHRPVVIHRGVVSTM 528

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNET 590
           ERF+  +IE +KG  P WL+P+Q  V  ++ +  +EYA+E+   L+   + +E D R+E 
Sbjct: 529 ERFVAFLIEEYKGAFPTWLAPVQVQVIPVSPTVHLEYAKEVQEQLQLAGIRVELDSRDEK 588

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           I YKIRE  ++KIP +++ GDKE  ++++ +R++G   ++ V     +  +  E+
Sbjct: 589 IGYKIREAQMQKIPYMLVVGDKEVEDKAVNVRKYGEQNSETVGFQAFLQNVKAEA 643


>gi|88859310|ref|ZP_01133950.1| threonyl-tRNA synthetase [Pseudoalteromonas tunicata D2]
 gi|88818327|gb|EAR28142.1| threonyl-tRNA synthetase [Pseudoalteromonas tunicata D2]
          Length = 636

 Score =  668 bits (1722), Expect = 0.0,   Method: Composition-based stats.
 Identities = 301/647 (46%), Positives = 417/647 (64%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
           MP    +T PDGS + F    +  DVA  I   LAK  +A  ING   D    + E S +
Sbjct: 1   MPV---ITLPDGSQRQFEHAVSVMDVALDIGPGLAKATIAGRINGVRVDACQLITEDSRL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT +D   L +IRHSCAH++  A++ ++P+V++AIGP I++GFYYD D E   + D+L
Sbjct: 58  EIITAKDDDGLEIIRHSCAHLLGHAIKQLYPDVKMAIGPTIDNGFYYDIDMEHSLTQDDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M ++       +K+ ++ ++AR++F ++ E YK+EIL E+I   +   LY   E
Sbjct: 118 EALEKQMLKLAKTHYDVVKKVVTWQEARDVFAARGEQYKIEILDENISRDDTPGLYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +    + F K+MKVAGAYWRGDS   ML R+YGTAW  +++L  YL  L
Sbjct: 178 YVDMCRGPHVPNMKFCEHF-KIMKVAGAYWRGDSENKMLQRVYGTAWADKKQLAAYLKRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+EKRDHRK+ + +DL+H  E+  G++FWH  GW I++ L  ++R K+++  YEE+  P
Sbjct: 237 EEAEKRDHRKIGKALDLWHWQEEAPGMVFWHNDGWSIYRELEDFVREKLREYKYEEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW++SGHWD Y   MF       T+ + R +A+KPMNCPGHV +FN GLKSYR+
Sbjct: 297 LMMDRSLWEKSGHWDKYADAMFT------TVSEKREYAIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFG  +RNEPSG+LHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++   Y+ 
Sbjct: 351 LPLRMAEFGCCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQVMDEVSACIKMVYDTYET 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI+VKLSTRPE R+G DA WD +E  +   L      + + I    L GEGAFYGP
Sbjct: 411 FGFEKIVVKLSTRPENRIGDDATWDQSEKALAEAL------THNGIEFDYLPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF LP R  A YV  ++E+  PVMIHRA+ GSIERFIGI
Sbjct: 465 KIEFTLYDCLDRAWQCGTVQLDFALPGRLGATYVAENNERRTPVMIHRAILGSIERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E + G  P WL+P Q +V  IT    +Y   I   L         D RNE I +KIRE
Sbjct: 525 LTEEYAGLFPTWLAPKQVVVMNITDKQADYCHNIVEKLNKLGFRACADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H++K+IP +++ GDKE  +  + +R        K  + D I  L+ E
Sbjct: 585 HTLKRIPYLLVVGDKEVEQEEVAVRTRTGDDLGKFKVDDFIAKLSDE 631


>gi|300722778|ref|YP_003712069.1| threonine tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
 gi|297629286|emb|CBJ89885.1| threonine tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
          Length = 642

 Score =  668 bits (1722), Expect = 0.0,   Method: Composition-based stats.
 Identities = 291/647 (44%), Positives = 430/647 (66%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS + F    +  DVA  I   LAK  +A  ING++ D  + +  + ++
Sbjct: 1   MPV---ITLPDGSQRQFEHAVSVMDVARDIGVGLAKACIAGRINGELVDACELIETDANL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT ++   L +IRHSCAH++  A++ +WP+ ++AIGPII++GFYYD D ++  + +++
Sbjct: 58  AIITSKNEEGLEIIRHSCAHLLGHAIKQLWPDTKMAIGPIIDNGFYYDVDLDRSLTKEDI 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M E+  +D   +K+ ++ ++AR+ F ++ E YK++IL E+I   ++  LY   E
Sbjct: 118 ELLEKRMLELAKKDYDVIKKKVTWQEARDAFVARGEEYKIQILDENISHDDHPGLYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KL KVAGAYWRG+S+  ML RIYGTAW  +++L  YL  L
Sbjct: 178 YVDMCRGPHVPNMRFCHHF-KLQKVAGAYWRGNSDNKMLQRIYGTAWADKKQLNAYLQRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G+ FWH  GW IF+ L +++R K+K+  Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMAFWHNDGWTIFRELETFVRTKLKEYQYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ +W+++GHW++Y+ NMF       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 297 FMMDRIMWEKTGHWENYKENMFT------TSSENREYCVKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT++Q+  E      +I  +Y  
Sbjct: 351 LPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEDQILQEVSSCIKMIYDVYGT 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI+VKLSTRPEKR+G++  WD+AE  +   L      +Q+ I      GEGAFYGP
Sbjct: 411 FGFEKIVVKLSTRPEKRIGTEKQWDEAEADLAKAL------TQNSIEFEYQPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF+LP+R +A YV  ++E+  PVMIHRAV GS+ERFIGI
Sbjct: 465 KIEFTLYDCLDRAWQCGTVQLDFSLPARLSASYVGENNERKVPVMIHRAVLGSLERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E + G  P WL+P Q +V  IT     Y QE+   L+   +  + D RNE I +KIRE
Sbjct: 525 LTEEYAGFFPTWLAPQQVVVMNITDGQSNYVQELVKKLQDVGIRAKADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H+++++P +++CGDKE     + +R         + + +    L  E
Sbjct: 585 HTLRRVPYMLVCGDKEVESGKVSVRTRRGKDLGSIDVSEFTEKLLTE 631


>gi|91762425|ref|ZP_01264390.1| Threonyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1002]
 gi|91718227|gb|EAS84877.1| Threonyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1002]
          Length = 638

 Score =  668 bits (1722), Expect = 0.0,   Method: Composition-based stats.
 Identities = 334/638 (52%), Positives = 460/638 (72%), Gaps = 13/638 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDG+   FP   TG +VAE IS+SL+K+A  +++N ++ DLS  +  + S++I T +
Sbjct: 4   ITLPDGNTIEFPNKVTGLEVAEKISKSLSKQATIISVNEELKDLSFVIDEDCSVKIFTSK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L  IRH  AHI A AVQ ++P  QV IGPIIE+GFYYDF +++PF+ D+L +IE K
Sbjct: 64  DKEGLETIRHDTAHITAMAVQELFPGTQVTIGPIIENGFYYDFSRKEPFTEDDLNKIENK 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+EI+ RD P  ++    +KA   F+ K E YK EI+ESIP  E+V++Y  G+W DLCRG
Sbjct: 124 MKEIVDRDVPTTREVWKRDKAISHFKDKGEIYKAEIIESIPQGEDVSIYFHGDWHDLCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PH+ STG++ K+FKL KV+GAYWRGDSN  ML RIYGT+W +Q++L +YL  +EE+EKRD
Sbjct: 184 PHLSSTGKIGKYFKLTKVSGAYWRGDSNNEMLQRIYGTSWASQKDLDEYLKRIEEAEKRD 243

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHL 304
           HRKL +EMDLFH  E+  G +FWH KGWK+FQ L++YMR R+ K  Y+E+NTP++LD+ L
Sbjct: 244 HRKLGKEMDLFHFREESPGSVFWHEKGWKLFQKLVAYMRARQEKAGYKEVNTPEILDRSL 303

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHW+ Y  +M+  +  D+ I     FA+KPMNCPGHV VFN GLKSYR+LP+R++E
Sbjct: 304 WEKSGHWEKYGEHMYTSQTPDEKI-----FAIKPMNCPGHVQVFNQGLKSYRDLPLRISE 358

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FG V+R EPSG+LHGL+RVR FTQDDAH+FCT++Q+ +ECL + NLI+ IYKD GFE ++
Sbjct: 359 FGKVHRYEPSGALHGLLRVRAFTQDDAHIFCTEDQITSECLIVTNLILDIYKDLGFEDVI 418

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +K S RP+ RVG D +WD AE  +   LD +K S   ++   +  GEGAFYGPK E++L+
Sbjct: 419 LKYSDRPDLRVGDDNVWDKAEKAL---LDAVKAS---KLQYTINKGEGAFYGPKIEFVLR 472

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           DAIGRDWQCGT+QVD NLP R +A +V+    K  PVM+HRA+FGS+ERFIGI+IEN+ G
Sbjct: 473 DAIGRDWQCGTLQVDLNLPGRLDASFVDKDGTKKIPVMLHRALFGSLERFIGILIENYAG 532

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P W++P+QA+V  I+     YA+E+   + +  +S E D +N  +NYKIREHS+ KIP
Sbjct: 533 KFPFWIAPLQAVVIPISEEFDTYAKEVNEKINNAGISSEVDLKNHNLNYKIREHSLSKIP 592

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +++ICG KE    S+ IRR  +   + + L   +   +
Sbjct: 593 LLLICGKKEVDSNSVTIRRLDTNKQENMELNLFLETFS 630


>gi|229846781|ref|ZP_04466888.1| threonyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
 gi|229810270|gb|EEP45989.1| threonyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
          Length = 643

 Score =  668 bits (1722), Expect = 0.0,   Method: Composition-based stats.
 Identities = 293/648 (45%), Positives = 427/648 (65%), Gaps = 16/648 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  +VA+ I   LAK  +A  +NG+  D  D +  + ++EIIT +
Sbjct: 4   ITLPDGSQRQFDNPVSVLEVAQDIGAGLAKATIAGRVNGERHDACDIIEQDATLEIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ ++P+V++AIGP IE+GFYYD D ++  + +++  IEK+
Sbjct: 64  DEDGLEIIRHSCAHLLGHAIKQLFPDVKMAIGPTIENGFYYDVDLDRSLTQEDIDAIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K+ ++ ++AR+ FE + E YK+ IL E+I       LY   E+ D+CR
Sbjct: 124 MLELAKTNYDVVKKRVTWQEARDTFEKRGEPYKMAILDENIERTATPALYHHLEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +    + F KL KVAGAYWRGDS   ML RIYGTAW  +++L +YL  LEE+ KR
Sbjct: 184 GPHVPNMRFCQHF-KLQKVAGAYWRGDSKNKMLQRIYGTAWADKKQLAEYLTRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQH 303
           DHRK+ + +DL+H+ E+  G++FWH  GW IF+ L +++R K+ + DY+E+  P ++D+ 
Sbjct: 243 DHRKIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW +Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWQNYADLMFT------TQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+ +E      ++  IY  FGF  I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQIESEVTSCIKMVYDIYSTFGFTNI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPE R+GSD +WD      +         + + +   +  GEGAFYGPK E+ L
Sbjct: 417 AVKLSTRPENRIGSDEMWD------RAEAGLAAALAHNGLEYEIQEGEGAFYGPKIEFAL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D +GR+WQCGT+Q+DF LP R +A YV   + +  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 RDCLGREWQCGTVQLDFALPGRLDATYVAEDNSRKTPVMIHRAILGSIERFIGIITEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P QA+V  IT S  +Y Q++A  L    L ++TD RNE + +KIREH+++++
Sbjct: 531 GFFPAWLAPTQAVVMNITDSQADYVQKVAKQLSDVGLRVKTDLRNEKVGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           P +++CGDKE +E  I +R          ++ +   IL  +    + +
Sbjct: 591 PYMLVCGDKEIAEGKIAVRTRKGADLGTFTVEEFAEILKNQVRSRELK 638


>gi|30020454|ref|NP_832085.1| threonyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|229127762|ref|ZP_04256751.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|29896005|gb|AAP09286.1| Threonyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|228655839|gb|EEL11688.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
          Length = 640

 Score =  668 bits (1722), Expect = 0.0,   Method: Composition-based stats.
 Identities = 276/644 (42%), Positives = 431/644 (66%), Gaps = 17/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEII 62
            I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N  + DL   + E   +EII
Sbjct: 5   MIEIKFPDGSVKEFVNGVTLEEIAGSISSSLKKKAVAGKVNDGLYDLRRNIEENAEVEII 64

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +    + + RHS AHI+A+AV+ ++ ++ + +GP+IE+GFYYD D     + ++L +I
Sbjct: 65  TIDSNEGVEITRHSAAHILAQAVKRMYGDINLGVGPVIENGFYYDMDLPSSVNVEDLRKI 124

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M++II  +    +  +S E+A +LF+   +  K+E+LE+IP+ E+VTLY+QGE+ DL
Sbjct: 125 EKEMKKIINENIKIERVEVSREEAAKLFQEMNDRLKLELLEAIPSGESVTLYKQGEFVDL 184

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+  TG +K F     V+GAYWRGDSN  +L RIYG A+++Q+EL +YL+F+EE+ 
Sbjct: 185 CRGPHLPFTGYLKAFQLTH-VSGAYWRGDSNNQVLQRIYGVAFSSQKELEEYLHFVEEAA 243

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KR+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R  + + +Y+E+ TP +++
Sbjct: 244 KRNHRKLGSELELFMFSEEAPGMPFYLPKGQMIRNELEAFLREIQKEYNYQEVRTPFMMN 303

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           Q +W++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R
Sbjct: 304 QEVWERSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIR 357

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           + EFG V+R+E SG+L+GL+RVR F QDDAH+F T +Q+ +E   +   I  +YK FGFE
Sbjct: 358 MCEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPKQIEDEIKSVMAQIDYVYKTFGFE 417

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPE  +G D LW+ AE  ++ VL ++           +  G+GAFYGPK ++
Sbjct: 418 Y-EVELSTRPEDSMGDDKLWEQAEAALENVLQSLNY------KYRLNEGDGAFYGPKIDF 470

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+ R  QCGTIQ+DF +P +F+  Y++ ++EK  PV+IHRAV GS++RF+ I+IE+
Sbjct: 471 HIKDALNRSHQCGTIQLDFQMPEKFDLNYIDENNEKKRPVVIHRAVLGSLDRFLAILIEH 530

Query: 542 FKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           F G  P W++P+Q  V  ++++   +YA EIA  L    + +E D R+E + YKIRE  +
Sbjct: 531 FGGAFPAWVAPVQVKVIPVSNAVHEQYANEIALKLAQAGVRVEQDARDEKLGYKIREAQM 590

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +K+P +++ GDKE    ++ +R++G   ++ ++L   +  + +E
Sbjct: 591 QKVPYVLVIGDKEMENGAVNVRKYGEEKSEVIALDVFVATIEEE 634


>gi|229079560|ref|ZP_04212097.1| Threonyl-tRNA synthetase [Bacillus cereus Rock4-2]
 gi|228703729|gb|EEL56178.1| Threonyl-tRNA synthetase [Bacillus cereus Rock4-2]
          Length = 640

 Score =  667 bits (1721), Expect = 0.0,   Method: Composition-based stats.
 Identities = 276/644 (42%), Positives = 432/644 (67%), Gaps = 17/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEII 62
            I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N  + DL   + E   +EII
Sbjct: 5   MIEIKFPDGSVKEFVNGVTLEEIAGSISSSLKKKAVAGKVNDGLYDLRRNIEENAEVEII 64

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +    + + RHS AHI+A+AV+ ++ ++ + +GP+IE+GFYYD D     + ++L +I
Sbjct: 65  TIDSNEGVEIARHSAAHILAQAVKRLYGDINLGVGPVIENGFYYDMDLPSSVNIEDLRKI 124

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M++II  +    +  +S ++A +LF+   +  K+E+LE+IP+ E+VTLY+QGE+ DL
Sbjct: 125 EKEMKKIINENIKIERVEVSRKEAAKLFQEMNDRLKLELLEAIPSGESVTLYKQGEFVDL 184

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ STG +K F     V+GAYWRGDSN  +L RIYG A+++Q+EL +YL+F+EE+ 
Sbjct: 185 CRGPHLPSTGYLKAFQLTH-VSGAYWRGDSNNQVLQRIYGVAFSSQKELEEYLHFVEEAA 243

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KR+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R  + +  Y+E+ TP +++
Sbjct: 244 KRNHRKLGSELELFMFSEEAPGMPFYLPKGQMIRNELEAFLREIQKEYKYQEVRTPFMMN 303

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           Q +W++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R
Sbjct: 304 QEVWERSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIR 357

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           + EFG V+R+E SG+L+GL+RVR F QDDAH+F T +Q+ +E   +   I  +YK FGFE
Sbjct: 358 MCEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPKQIEDEIKSVMAQIDYVYKTFGFE 417

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPE  +G D LW+ AE  ++ VL ++           +  G+GAFYGPK ++
Sbjct: 418 Y-EVELSTRPEDSMGDDKLWEQAEAALENVLQSLNY------KYRLNEGDGAFYGPKIDF 470

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+ R  QCGTIQ+DF +P +F+  Y++ ++EK  PV+IHRAV GS++RF+ I+IE+
Sbjct: 471 HIKDALNRSHQCGTIQLDFQMPEKFDLNYIDENNEKKRPVVIHRAVLGSLDRFLAILIEH 530

Query: 542 FKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           F G  P W++P+Q  V  ++++   +YA EIA+ L    + +E D R+E + YKIRE  +
Sbjct: 531 FGGAFPAWVAPVQVKVIPVSNAVHEQYANEIAHKLAQAGVRVEQDARDEKLGYKIREAQM 590

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +K+P +++ GDKE    ++ +R++G   ++ ++L   +  + +E
Sbjct: 591 QKVPYVLVIGDKEMENGAVNVRKYGEEKSEVIALDVFVATIEEE 634


>gi|257139340|ref|ZP_05587602.1| threonyl-tRNA synthetase [Burkholderia thailandensis E264]
          Length = 593

 Score =  667 bits (1721), Expect = 0.0,   Method: Composition-based stats.
 Identities = 309/606 (50%), Positives = 422/606 (69%), Gaps = 15/606 (2%)

Query: 9   FPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDP 67
            PDGSI+ +    T ++VA SI   LAK A+   ++G++ D S  + R+ S+ I+T +D 
Sbjct: 1   MPDGSIRQYEHPVTVAEVAASIGPGLAKAALGGKLDGELVDTSALIDRDASLAIVTDKDA 60

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQ 127
             L +IRHS AH++A AV+ + P+ QV IGP+I++GFYYDF   +PF+ ++L  IEK+MQ
Sbjct: 61  DGLDIIRHSTAHLLAYAVKELHPDAQVTIGPVIDNGFYYDFSYHRPFTPEDLEAIEKRMQ 120

Query: 128 EIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPH 187
           E+  RD P  ++ +S ++A   F S  E YK EI+ESIPA + + LY  G + DLCRGPH
Sbjct: 121 ELAKRDEPVTRRVVSRDEAVSYFRSIGEKYKAEIIESIPASDEIKLYSHGGFTDLCRGPH 180

Query: 188 VRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHR 247
           V STG++K F KLMKVAGAYWRGDS    L RIYGTAW  +++   YL+ LEE+EKRDHR
Sbjct: 181 VPSTGKLKVF-KLMKVAGAYWRGDSKNEQLQRIYGTAWTKKEDQDAYLHMLEEAEKRDHR 239

Query: 248 KLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ 306
           KL +++DLFHI E+  G++FWH KGW ++Q +  YMRR++    Y EI TP ++D+ LW+
Sbjct: 240 KLGKQLDLFHIQEEAPGMVFWHPKGWTLWQRVEQYMRRRLDAAGYLEIKTPMIMDRSLWE 299

Query: 307 QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFG 366
            SGHW +YR NMF       T  + R +A+KPMNCPGHV VF HGL+SYR+LP+R AEFG
Sbjct: 300 ASGHWQNYRENMFT------TESEKRDYAIKPMNCPGHVQVFKHGLRSYRDLPLRYAEFG 353

Query: 367 SVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK 426
           S +RNE SG+LHGLMRVRGF QDDAH+FCT++Q+ +E +  + L +S+Y+DFGF++I +K
Sbjct: 354 SCHRNEASGALHGLMRVRGFVQDDAHIFCTEDQINSEAIAFNKLAMSVYEDFGFDRIDIK 413

Query: 427 LSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDA 486
           LS RPE+R+GSD  WD AE  ++  L          +    L GEGAFYGPK EY +KDA
Sbjct: 414 LSLRPEQRMGSDETWDHAEEGLRNALKACG------LEWEELPGEGAFYGPKIEYHIKDA 467

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNL 546
           +GR WQCGT+Q+D  LP R  A YV   + +  PVM+HRA+ GS+ERF+GI+IE+  G +
Sbjct: 468 LGRSWQCGTLQLDMMLPERLGAEYVAEDNSRRRPVMLHRAIVGSMERFLGILIEHHAGAM 527

Query: 547 PLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPII 606
           P WL+P  A+V  I  S  EYAQ +   L+   L +  D RNE I+YKIREH+++K+P +
Sbjct: 528 PAWLAPFHAVVLNIAESQAEYAQTVVQSLQKQGLRVSADLRNEKISYKIREHTLEKVPYL 587

Query: 607 IICGDK 612
           ++ GDK
Sbjct: 588 LVLGDK 593


>gi|228933677|ref|ZP_04096525.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228826004|gb|EEM71789.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
          Length = 639

 Score =  667 bits (1721), Expect = 0.0,   Method: Composition-based stats.
 Identities = 276/644 (42%), Positives = 431/644 (66%), Gaps = 17/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEII 62
            I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N ++ DL   + E   +EII
Sbjct: 5   MIEIKFPDGSVKEFVKGITLEEIAGSISSSLKKKAVAGNVNDELYDLRRNIEENAEVEII 64

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +    + + RHS AHI+A+AV+ ++ ++ + +GP+IE+GFYYD D     + ++L +I
Sbjct: 65  TIDSNEGVEIARHSAAHILAQAVKRLYGDINLGVGPVIENGFYYDMDLPSSVNVEDLRKI 124

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M++II  +    +  +S E+A +LF+   +  K+E+LE+IP+ E+VTLY+QGE+ DL
Sbjct: 125 EKEMKKIINENIKVERVEVSREEAAKLFQEMNDRLKLELLEAIPSGESVTLYKQGEFVDL 184

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ STG +K F     V+GAYWRG SN  +L RIYG A+++Q+EL +YL+F+EE+ 
Sbjct: 185 CRGPHLPSTGYLKVFQLTH-VSGAYWRGYSNNQVLQRIYGVAFSSQKELEEYLHFVEEAA 243

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KR+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R  + + +Y+E+ TP +++
Sbjct: 244 KRNHRKLGNELELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMN 303

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           Q +W++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R
Sbjct: 304 QEVWERSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIR 357

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           + EFG V+R+E SG+L+GL+RVR F QDDAH+F T EQ+ +E   +   I  +YK FGF+
Sbjct: 358 MCEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPEQIEDEIKSVMAQIDYVYKTFGFK 417

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPE  +G D LW+ AE  ++ VL ++           +  G+GAFYGPK ++
Sbjct: 418 Y-EVELSTRPEDSMGDDKLWEQAEASLENVLQSLNY------KYRLNEGDGAFYGPKIDF 470

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+ R  QCGTIQ+DF +P +F+  Y++  +EK  PV+IHRAV GS++RF+ I+IE+
Sbjct: 471 HIKDALNRSHQCGTIQLDFQMPEKFDLNYIDEKNEKKRPVVIHRAVLGSLDRFLAILIEH 530

Query: 542 FKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           F G  P W++P+Q  V  ++++  V+YA E+A+ L    + +E D R+E + YKIRE  +
Sbjct: 531 FGGAFPAWVAPVQVKVIPVSNAVHVQYADEVADKLAQAGVRVERDMRDEKLGYKIREAQM 590

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +K+P +++ GDKE    ++ +R++G   +  + L   +  + +E
Sbjct: 591 QKVPYVLVIGDKEMENGAVNVRKYGEEKSDVIELDMFVESMKEE 634


>gi|319776351|ref|YP_004138839.1| threonyl-tRNA synthetase [Haemophilus influenzae F3047]
 gi|329123506|ref|ZP_08252070.1| threonine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
 gi|317450942|emb|CBY87169.1| threonyl-tRNA synthetase [Haemophilus influenzae F3047]
 gi|327471088|gb|EGF16543.1| threonine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
          Length = 643

 Score =  667 bits (1721), Expect = 0.0,   Method: Composition-based stats.
 Identities = 292/648 (45%), Positives = 428/648 (66%), Gaps = 16/648 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  +VA+ I   LAK  +A  +NG+  D  D +  + ++EIIT +
Sbjct: 4   ITLPDGSQRQFDRPVSVLEVAQDIGAGLAKATIAGRVNGERRDACDVIEQDATLEIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ ++P+V++AIGP IE+GFYYD D ++  + +++  IEK+
Sbjct: 64  DEDGLEIIRHSCAHLLGHAIKQLFPDVKMAIGPTIENGFYYDVDLDRSLTQEDIDAIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K+ ++ ++AR+ FE + E+YK+ IL E+I       LY   E+ D+CR
Sbjct: 124 MLELAKTNYDVVKKRVTWQEARDTFEKRGESYKMAILDENIERTATPALYHHLEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +    + F KL KVAGAYWRGDS   ML RIYGTAW  +++L +YL  LEE+ KR
Sbjct: 184 GPHVPNMRFCQHF-KLQKVAGAYWRGDSKNKMLQRIYGTAWADKKQLAEYLTRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQH 303
           DHRK+ + +DL+H+ E+  G++FWH  GW IF+ L +++R K+ + DY+E+  P ++D+ 
Sbjct: 243 DHRKIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW +Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWQNYADLMFT------TQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+ +E      ++  IY  FGF  I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQIESEVTSCIKMVYDIYSTFGFTNI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPE R+GSD +WD      +         + + +   +  GEGAFYGPK E+ L
Sbjct: 417 AVKLSTRPENRIGSDEMWD------RAEGGLAAALAHNGLEYEIQEGEGAFYGPKIEFAL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D +GR+WQCGT+Q+DF LP R +A YV   + +  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 RDCLGREWQCGTVQLDFALPGRLDATYVAEDNSRKTPVMIHRAILGSIERFIGIITEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P QA+V  IT S  +Y Q++A  L    L ++TD RNE + +KIREH+++++
Sbjct: 531 GFFPAWLAPTQAVVMNITDSQADYVQKVAKQLSDVGLRVKTDLRNEKVGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           P +++CGDKE +E  + +R          ++ +   IL  +    + +
Sbjct: 591 PYMLVCGDKEIAEGKVAVRTRKGADLGTFTVEEFAEILKNQVRNRELK 638


>gi|118444060|ref|YP_877833.1| threonyl-tRNA synthetase [Clostridium novyi NT]
 gi|166223336|sp|A0PZN1|SYT_CLONN RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|118134516|gb|ABK61560.1| threonyl-tRNA synthetase [Clostridium novyi NT]
          Length = 637

 Score =  667 bits (1721), Expect = 0.0,   Method: Composition-based stats.
 Identities = 297/643 (46%), Positives = 416/643 (64%), Gaps = 16/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+T  DG +       T S++A  IS SL KKA+   ING+  +L D +  + ++EI+
Sbjct: 1   MIKITLKDGKVLEVEKGLTVSEIAARISTSLRKKALGAKINGEKAELMDVINEDSTLEIL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T ED      +RH+ +HI+A+AV+ ++PEV++AIGP IE+GFYYDFD E  F+ + L +I
Sbjct: 61  TFEDQEGKDTLRHTASHILAQAVKRLYPEVKLAIGPSIENGFYYDFDAEFSFTPEILEKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M +I+  +    K   S E A    + + E YKVE++E +P +  ++ Y QG++ DL
Sbjct: 121 EKEMNKIVKENLQLKKFTKSREDAINFMKERNEDYKVELIEDLPEESIISFYEQGDFVDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPHV ST +VK   KL+ VAGAYWRG+ N  ML RIYGTA+  + EL +YL+ LEE++
Sbjct: 181 CAGPHVPSTKEVK-AIKLLSVAGAYWRGNENNKMLQRIYGTAFTKKAELEEYLHMLEEAK 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KRDHRKL +E+ LF + E+G G  F++ KG  +  TL +Y R    K  Y EI TP +L+
Sbjct: 240 KRDHRKLGKELGLFDLKEEGPGFPFFYPKGMILRNTLENYWREMHEKAGYGEIRTPIILN 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW QSGHWD Y+ NM+  K       D   +A+KPMNCPG + V+   L SYRELP+R
Sbjct: 300 EKLWHQSGHWDHYKENMYFTKI------DGEDYAIKPMNCPGSILVYKSDLHSYRELPIR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           L E G V+R+E SG+LHGLMRVR FTQDDAH+F TKEQ+ +E L +  +I + Y  FGFE
Sbjct: 354 LGELGLVHRHEYSGALHGLMRVRNFTQDDAHIFMTKEQITSEILGVIKMIDNFYSLFGFE 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPE  +GSD  W+ A N +   L+         +   +  G+GAFYGPK ++
Sbjct: 414 YF-VELSTRPEDSMGSDEDWEAATNGLIKALNEAG------LEYKINEGDGAFYGPKIDF 466

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L+D +GR WQCGTIQ+DF +P RF+  YV +  EK  PVM HR +FGSIERFIGI+ E+
Sbjct: 467 HLRDCLGRTWQCGTIQLDFQMPERFDLSYVGADGEKHRPVMAHRVIFGSIERFIGILTEH 526

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  P WL+P+Q  +  IT + VEY +EI  +L  + + +E D RNE I YKIRE  ++
Sbjct: 527 YAGAFPTWLAPVQVKIMNITDNQVEYCKEIQKVLNENGIRVELDLRNEKIGYKIREAQLQ 586

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIP +++ GDKE +E++I +R         ++L D + ++ KE
Sbjct: 587 KIPYMLVLGDKEMNEKTIAVRARKQGDLGAMNLTDFVAMVKKE 629


>gi|313896316|ref|ZP_07829869.1| threonine--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430]
 gi|312975115|gb|EFR40577.1| threonine--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430]
          Length = 639

 Score =  667 bits (1721), Expect = 0.0,   Method: Composition-based stats.
 Identities = 283/644 (43%), Positives = 403/644 (62%), Gaps = 18/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDP-VREGSIEII 62
            +KLT PDGS++      T  DV + +S SLAKKA+A +++GK  DL  P  ++ + +++
Sbjct: 1   MVKLTLPDGSVREVEHGTTLLDVVKQMSNSLAKKALAASLDGKTVDLMTPATKDAAFQVL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVA--IGPIIEDGFYYDFDKEQPFSSDELA 120
           T ED      +RH+C+HIMA+AV+ ++ +  V   IGP IE+GFYYDFD E   +  +L 
Sbjct: 61  TFEDAGGRLALRHTCSHIMAQAVKRLYKDAHVQLAIGPAIENGFYYDFDMEHRLTDADLR 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEK+M++I+  +    ++ +   +A   F  K E YKVE++E +P    ++ Y QGE+ 
Sbjct: 121 DIEKEMKKIVKENLKLERREIPRSEAIAYFREKGENYKVELIEDLPEDVTISTYTQGEFT 180

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLC GPHV STG+VK       +AGAYWRG     ML RIYGTA+  Q+EL  YL+ LEE
Sbjct: 181 DLCAGPHVLSTGKVKALRLQ-SIAGAYWRGSEKNKMLQRIYGTAFEKQEELDAYLHMLEE 239

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           +EKRDHRKL RE+DLF + E+G G  F+H  G  +   L++Y R    +  Y EI+TP +
Sbjct: 240 AEKRDHRKLGRELDLFSLHEEGPGFPFFHPNGMILRNELLNYWREVHRRYGYSEISTPVI 299

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           L + LW+ SGHW  YR NM+  +       D   +A+KPMNCPG + V+   L SYR+LP
Sbjct: 300 LSRKLWETSGHWFHYRENMYTTQI------DEEDYAIKPMNCPGCMLVYRSQLHSYRDLP 353

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +RLAE G V+R+E SG+LHGL RVR FTQDDAH+F T EQ+  E     +L   +Y+ FG
Sbjct: 354 LRLAELGLVHRHELSGALHGLFRVRNFTQDDAHLFVTPEQIEGEIQHTIDLFDEVYRTFG 413

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
                 +LSTRP+  +GSD +W+ A + ++  L+         ++  V  G+GAFYGPK 
Sbjct: 414 LSY-KAELSTRPDDSMGSDEMWELATSGLQKALE------NRGLDYIVNEGDGAFYGPKI 466

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           ++ L+D+IGR WQCGTIQ+D +LP +F+  YV    EK  PVM+HR V+GSIERFIGI+I
Sbjct: 467 DFHLRDSIGRTWQCGTIQLDMSLPEKFDLTYVGEDGEKHRPVMLHRVVYGSIERFIGILI 526

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           ENF G  P+W++P+Q  +  IT    EYA+E+   +    + +E D RNE   YKIRE  
Sbjct: 527 ENFAGAFPVWMTPVQVRILPITERHAEYAEELRKRMFDRGIRVEVDNRNEKTGYKIRESQ 586

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +KK P  ++ GD+E    ++ +R++G   +  +S  D I  + K
Sbjct: 587 VKKTPYTLVVGDQEQESGTVALRKYGEKDSTVMSADDFIAFVEK 630


>gi|34496803|ref|NP_901018.1| threonyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472]
 gi|73919781|sp|Q7NYC6|SYT_CHRVO RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|34102658|gb|AAQ59023.1| threonyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472]
          Length = 633

 Score =  667 bits (1721), Expect = 0.0,   Method: Composition-based stats.
 Identities = 324/646 (50%), Positives = 443/646 (68%), Gaps = 19/646 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP    +  PDGS+++F    T  +VA SI   LA+ A+A  ++G++ D S  + R   +
Sbjct: 1   MPD---IRLPDGSVRSFDKPVTVHEVAASIGAGLARAALAGRVDGQLVDTSYLIDRNADL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            I+T +D   L+VIRHS AH++A AV+ ++PE QV IGP IE+GFYYDF  ++PF+ ++L
Sbjct: 58  AIVTDKDADGLSVIRHSTAHLLAYAVKELFPEAQVTIGPEIENGFYYDFAYKRPFTPEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A IEKKM E+  +D P  +  L  ++A   F+S  EAYK EI+ESIP  E ++LYR+GE+
Sbjct: 118 AAIEKKMAELAKKDIPVERYELPRDEAIAYFKSIGEAYKAEIIESIPQGEVLSLYREGEF 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV STG++K F KLMKVAGAYWRGDS   ML R+YGTAW  +++L  YLY LE
Sbjct: 178 TDLCRGPHVPSTGKLKVF-KLMKVAGAYWRGDSKNEMLQRVYGTAWAKKEDLDAYLYMLE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+EKRDHRKL  ++DLFH+ ++  G++FWH KGW+++Q +  YMR K+  + Y+E+ TP 
Sbjct: 237 EAEKRDHRKLGVQLDLFHLQDEAPGMVFWHPKGWQLWQNVEQYMRAKLNHEGYKEVRTPM 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D +LW++SGH  +YR NMF       T  + R +A+KPMNCPGHV +FN GL+SYR+L
Sbjct: 297 MMDANLWERSGHAANYRENMFI------TESEKRDYAVKPMNCPGHVQIFNSGLRSYRDL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R AEFGS +RNEPSG+LHG+MRVRGF QDD H+FCT++Q+  E    H L++ +Y  F
Sbjct: 351 PLRYAEFGSCHRNEPSGALHGIMRVRGFVQDDGHIFCTEDQINQEAKDFHRLVMEVYDRF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+K+ +KL+ RPEKR+G ++ WD AE  M+  L          +    L GEGAFYGPK
Sbjct: 411 GFDKVAIKLALRPEKRIGEESTWDKAEEGMREALRACG------VEWEELPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            EY +KDA+GR WQCGT+Q+DF LP R +A YV   + +  PVM+HRA  GS+ERF+GI+
Sbjct: 465 IEYHIKDALGRSWQCGTLQLDFMLPERLDAEYVADDNSRKRPVMLHRAALGSLERFLGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IEN  G  PLWL+P+Q +V  IT +  EYA EIA  L+     +E D RNE I YKIREH
Sbjct: 525 IENHAGAFPLWLAPVQMVVMNITEAQAEYAAEIAKELEKQGFRVELDLRNEKIGYKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           S++K+P  II GDKE ++  + +R  G     +++L      L  E
Sbjct: 585 SLQKLPYQIIVGDKEKADGLVAVRARGE-DLGQLTLEAFAARLKAE 629


>gi|309973051|gb|ADO96252.1| Threonyl-tRNA synthetase [Haemophilus influenzae R2846]
          Length = 643

 Score =  667 bits (1721), Expect = 0.0,   Method: Composition-based stats.
 Identities = 291/648 (44%), Positives = 427/648 (65%), Gaps = 16/648 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  +VA+ I   LAK  +A  +NG+  +  D +  + ++EIIT +
Sbjct: 4   ITLPDGSQRQFDRPVSVLEVAQDIGAGLAKATIAGRVNGERRNACDVIEQDATLEIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ ++P+V++AIGP IE+GFYYD D ++  + +++  IEK+
Sbjct: 64  DEDGLEIIRHSCAHLLGHAIKQLFPDVKMAIGPTIENGFYYDVDLDRSLTQEDIDAIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K+ ++ ++AR+ FE + E YK+ IL E+I       LY   E+ D+CR
Sbjct: 124 MLELAKTNYDVVKKRVTWQEARDTFEKRGEPYKMAILDENIERTATPALYHHLEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +    + F KL KVAGAYWRGDS   ML RIYGTAW  +++L +YL  LEE+ KR
Sbjct: 184 GPHVPNMRFCQHF-KLQKVAGAYWRGDSKNKMLQRIYGTAWADKKQLAEYLTRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQH 303
           DHRK+ + +DL+H+ E+  G++FWH  GW IF+ L +++R K+ + DY+E+  P ++D+ 
Sbjct: 243 DHRKIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW +Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWQNYADLMFT------TQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+ +E      ++  IY  FGF  I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQIESEVTSCIKMVYDIYSTFGFTNI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPE R+GSD +WD      +         + + +   +  GEGAFYGPK E+ L
Sbjct: 417 AVKLSTRPENRIGSDEMWD------RAEAGLAAALAHNGLEYEIQEGEGAFYGPKIEFAL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D +GR+WQCGT+Q+DF LP R +A YV   + +  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 RDCLGREWQCGTVQLDFALPGRLDATYVAEDNSRKTPVMIHRAILGSIERFIGIITEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P QA+V  IT S  +Y Q++A  L    L ++TD RNE + +KIREH+++++
Sbjct: 531 GFFPAWLAPTQAVVMNITDSQADYVQKVAKQLSDVGLRVKTDLRNEKVGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           P +++CGDKE +E  + +R          ++ +   IL  +    + +
Sbjct: 591 PYMLVCGDKEIAEGKVAVRTRKGADLGTFTVEEFAEILKNQVRSRELK 638


>gi|148826837|ref|YP_001291590.1| threonyl-tRNA synthetase [Haemophilus influenzae PittGG]
 gi|166223345|sp|A5UEK1|SYT_HAEIG RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|148718079|gb|ABQ99206.1| threonyl-tRNA synthetase [Haemophilus influenzae PittGG]
          Length = 643

 Score =  667 bits (1721), Expect = 0.0,   Method: Composition-based stats.
 Identities = 292/648 (45%), Positives = 427/648 (65%), Gaps = 16/648 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  +VA+ I   LAK  +A  +NG+  D  D +  + ++EIIT +
Sbjct: 4   ITLPDGSQRQFDNPVSVLEVAQDIGAGLAKATIAGRVNGERHDACDIIEQDATLEIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ ++P+V++AIGP IE+GFYYD D ++  + +++  IEK+
Sbjct: 64  DEDGLEIIRHSCAHLLGHAIKQLFPDVKMAIGPTIENGFYYDVDLDRSLTQEDIDAIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K+ ++ ++AR+ FE + E YK+ IL E+I       LY   E+ D+CR
Sbjct: 124 MLELAKTNYDVVKKRVTWQEARDTFEKRGEPYKMAILDENIERTAMPALYHHLEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +    + F KL KVAGAYWRGDS   ML RIYGTAW  +++L +YL  LEE+ KR
Sbjct: 184 GPHVPNMRFCQHF-KLQKVAGAYWRGDSKNKMLQRIYGTAWADKKQLAEYLTRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQH 303
           DHRK+ + +DL+H+ E+  G++FWH  GW IF+ L +++R K+ + DY+E+  P ++D+ 
Sbjct: 243 DHRKIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW +Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWQNYADLMFT------TQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+ +E      ++  IY  FGF  I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQIESEVTSCIKMVYDIYSTFGFTNI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPE R+GSD +WD      +         + + +   +  GEGAFYGPK E+ L
Sbjct: 417 AVKLSTRPENRIGSDEMWD------RAEAGLAAALAHNGLEYEIQEGEGAFYGPKIEFAL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D +GR+WQCGT+Q+DF LP R +A YV   + +  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 RDCLGREWQCGTVQLDFALPGRLDATYVAEDNSRKTPVMIHRAILGSIERFIGIITEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P QA+V  IT S  +Y Q++A  L    L ++TD RNE + +KIREH+++++
Sbjct: 531 GFFPAWLAPTQAVVMNITDSQADYVQKVAKQLSDVGLRVKTDLRNEKVGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           P +++CGDKE +E  + +R          ++ +   IL  +    + +
Sbjct: 591 PYMLVCGDKEIAEGKVAVRTRKGADLGTFTVEEFAEILKNQVRSRELK 638


>gi|34580760|ref|ZP_00142240.1| threonyl-tRNA synthetase [Rickettsia sibirica 246]
 gi|28262145|gb|EAA25649.1| threonyl-tRNA synthetase [Rickettsia sibirica 246]
          Length = 635

 Score =  667 bits (1721), Expect = 0.0,   Method: Composition-based stats.
 Identities = 328/644 (50%), Positives = 443/644 (68%), Gaps = 15/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I ++FPDGSIK F  + T  +VA +IS SLAK A+   ING++ DLS  +  +  + I+
Sbjct: 1   MINISFPDGSIKQFAKNITAYEVANAISMSLAKAAMVAEINGELQDLSIVIDNDCKLRIL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +DP  L +IRH  AH+ AEAV+ ++PE QV IGP IE+G+YYDF +++PF++D+LA I
Sbjct: 61  TAKDPECLEIIRHDAAHLTAEAVKELFPETQVTIGPAIENGYYYDFARDKPFTTDDLAVI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E KMQE+  ++    ++    +KA E F+S  E YK EI+ SIPA E +TLYRQG + DL
Sbjct: 121 EAKMQELSQKNEQVTRELWDRDKAVEFFKSIGEHYKAEIIASIPAGEPITLYRQGNFIDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH  STG VK F KLMKVAGAYWRGDS   ML RIYGTAW T+++L  YL  LEE+E
Sbjct: 181 CRGPHAPSTGVVKHF-KLMKVAGAYWRGDSRNEMLQRIYGTAWATKEQLDSYLLMLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD 301
           KRDHRKL RE+DLFH  E+  G++FWH KGW I+ T+  Y+R+KI+ + Y E+ TP ++D
Sbjct: 240 KRDHRKLGRELDLFHFQEEAQGMVFWHDKGWSIYNTIEQYIRKKIRKNGYTEVKTPVLVD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW+ +R +MFA++  D T       ALKPMNCP HV +F  G+KSYR+LP+R
Sbjct: 300 KSLWEASGHWEKFRDDMFALETDDKT------LALKPMNCPCHVQIFKQGIKSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           ++EFG  +RNE SG+LHGLMRVR   QDDAH+FC  EQ+ +E +    L+  +YKDFGF 
Sbjct: 354 MSEFGLCHRNEASGALHGLMRVRSLVQDDAHIFCAAEQITDETVSFCKLLTEVYKDFGFT 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            I VK S RPE R GS+ +WD AEN +K  ++      Q   N  +  GEGAFYGPK E+
Sbjct: 414 DIKVKFSDRPEIRAGSNEVWDKAENALKEAVE------QAGFNYTLNPGEGAFYGPKLEF 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
           +L DAIGR WQCGT+Q+DF LP R +A YV +  EK  PVM+HRA+ GS+ERFIGI+IE 
Sbjct: 468 VLTDAIGRQWQCGTLQMDFVLPERLDASYVAASGEKKRPVMLHRAILGSLERFIGILIEE 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  PLWL+P+Q  + TITS   +YA E+   L  + +  + +   + INYKIRE S +
Sbjct: 528 YAGRFPLWLAPVQVAIATITSDLNDYALEVQKALIDNGVRTDVNISPDKINYKIREFSNQ 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           KIP+I + G +E   + + IRR G+T  + +S+   I ++ +E+
Sbjct: 588 KIPMIAVIGKQEQENKQVAIRRLGTTDQEVLSVEQLIAVVKEEN 631


>gi|218231087|ref|YP_002367070.1| threonyl-tRNA synthetase [Bacillus cereus B4264]
 gi|218159044|gb|ACK59036.1| threonine--tRNA ligase [Bacillus cereus B4264]
          Length = 640

 Score =  667 bits (1720), Expect = 0.0,   Method: Composition-based stats.
 Identities = 277/644 (43%), Positives = 433/644 (67%), Gaps = 17/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEII 62
            I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N  + DL   + E   +EII
Sbjct: 5   MIEIKFPDGSVKEFVNGVTLEEIAGSISSSLKKKAVAGKVNDGLYDLRRNIEENAEVEII 64

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +  + + + RHS AHI+A+AV+ ++ ++ + +GP+IE+GFYYD D     + ++L +I
Sbjct: 65  TIDSNKGVEIARHSAAHILAQAVKRLYGDINLGVGPVIENGFYYDMDLPSSVNIEDLRKI 124

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M++II  +    +  +S E+A +LF+   +  K+E+LE+IP+ E+VTLY+QGE+ DL
Sbjct: 125 EKEMKKIINENIKIERVEVSREEAAKLFQEMNDRLKLELLEAIPSGESVTLYKQGEFVDL 184

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ STG +K F     V+GAYWRGDSN  +L RIYG A+++Q+EL +YL+F+EE+ 
Sbjct: 185 CRGPHLPSTGYLKAFQLTH-VSGAYWRGDSNNQVLQRIYGVAFSSQKELEEYLHFVEEAA 243

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KR+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R  + +  Y+E+ TP +++
Sbjct: 244 KRNHRKLGSELELFMFSEEAPGMPFYLPKGQMIRNELEAFLREIQKEYKYQEVRTPFMMN 303

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           Q +W++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R
Sbjct: 304 QEVWERSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIR 357

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           + EFG V+R+E SG+L+GL+RVR F QDDAH+F T +Q+ +E   +   I  +YK FGFE
Sbjct: 358 MCEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPKQIEDEIKSVMAQIDYVYKTFGFE 417

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPE  +G D LW+ AE  ++ VL ++           +  G+GAFYGPK ++
Sbjct: 418 Y-EVELSTRPEDSMGDDKLWEQAEAALENVLQSLNY------KYRLNEGDGAFYGPKIDF 470

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+ R  QCGTIQ+DF +P +F+  Y++ ++EK  PV+IHRAV GS++RF+ I+IE+
Sbjct: 471 HIKDALNRSHQCGTIQLDFQMPEKFDLNYIDENNEKKRPVVIHRAVLGSLDRFLAILIEH 530

Query: 542 FKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           F G  P W++P+Q  V  ++++   +YA EIA+ L    + +E D R+E + YKIRE  +
Sbjct: 531 FGGAFPAWVAPVQVKVIPVSNAVHEQYANEIAHKLAQAGVRVEQDARDEKLGYKIREAQM 590

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +K+P +++ GDKE    ++ +R++G   ++ ++L   +  + +E
Sbjct: 591 QKVPYVLVIGDKEMENGAVNVRKYGEEKSEVIALDVFVASIEEE 634


>gi|254456038|ref|ZP_05069467.1| threonyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211]
 gi|207083040|gb|EDZ60466.1| threonyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211]
          Length = 638

 Score =  667 bits (1720), Expect = 0.0,   Method: Composition-based stats.
 Identities = 328/638 (51%), Positives = 452/638 (70%), Gaps = 13/638 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDG+  NFP   TG DVAE IS+SLAK+A+ +++NG++ DL   +  + SI+I T +
Sbjct: 4   ITLPDGNNLNFPNKVTGLDVAEKISKSLAKQAMVISVNGELKDLDHIIENDCSIKIFTSK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           +P  L  IRH  AHI+A AVQ ++P  QV IGP+IE+GFYYDF +++ F+ D+L +IE K
Sbjct: 64  NPEGLETIRHDTAHILAMAVQELFPGTQVTIGPVIENGFYYDFARKESFTEDDLIKIENK 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+EI+ RD    ++     KA   F+ K E YK E++E+IP  E+V++Y  G+W DLCRG
Sbjct: 124 MKEIVDRDEITKREVWERNKAIAHFKKKGEVYKAELIEAIPENEDVSIYFHGDWHDLCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PH+ STG++ K+FKL KV+GAYWRGDS   ML RIYGT+W +Q+EL +YL  +EE+EKRD
Sbjct: 184 PHLSSTGKIGKYFKLTKVSGAYWRGDSKNEMLQRIYGTSWASQKELDEYLKRIEEAEKRD 243

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHL 304
           HRKL +EMDLFH  E+  G +FWH KGW +FQ LI+YMR R+    Y E+NTP++LD+ L
Sbjct: 244 HRKLGKEMDLFHFREESPGSVFWHEKGWALFQKLINYMRSRQDAAGYREVNTPEILDRQL 303

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHW+ Y  NM+  +  D+     + FA+KPMNCPGH+ VFN GLKSYR+LP+R+AE
Sbjct: 304 WEKSGHWEKYGENMYTSETPDE-----KVFAIKPMNCPGHIQVFNQGLKSYRDLPIRIAE 358

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FG V+R EPSG+LHGL+RVR FTQDDAH+FC+++Q+ +ECL++ NLI+ IYKD GFE ++
Sbjct: 359 FGKVHRYEPSGALHGLLRVRAFTQDDAHIFCSEDQITSECLEVTNLILDIYKDLGFENVI 418

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +K + RPE RVG D +WD AE  +   +   K      +   +  GEGAFYGPK E++L+
Sbjct: 419 LKYADRPEVRVGDDEIWDKAEASLLEAVKASK------LEYSINKGEGAFYGPKIEFVLR 472

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           DAIGRDWQCGT+QVD NLP R +A YV+    K  PVM+HRA+FGS+ERFIGI+IEN+ G
Sbjct: 473 DAIGRDWQCGTLQVDLNLPGRLDASYVDKDGTKKVPVMLHRALFGSLERFIGILIENYAG 532

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P W+SP+Q +V  I+    +YA E++  +K   +S   D +N  +NYKIR+HS+ KIP
Sbjct: 533 KFPFWISPLQTMVIPISEEFNDYAVEVSKKIKKVGISSAVDLKNNNLNYKIRDHSLAKIP 592

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +++ICG KE    S+ IRR  S   + +     +   +
Sbjct: 593 VLLICGKKEVDSNSVTIRRLDSNKQENMDTEQFLKTFS 630


>gi|295706837|ref|YP_003599912.1| threonyl-tRNA synthetase [Bacillus megaterium DSM 319]
 gi|294804496|gb|ADF41562.1| threonyl-tRNA synthetase [Bacillus megaterium DSM 319]
          Length = 645

 Score =  667 bits (1720), Expect = 0.0,   Method: Composition-based stats.
 Identities = 264/655 (40%), Positives = 429/655 (65%), Gaps = 22/655 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           M   IK+TFPDG++K +P  ++  D+A SIS  L KKA+A  +NG++ DL  P+  +GS+
Sbjct: 1   MSEIIKMTFPDGAVKEYPKGSSTEDIAASISPGLKKKALAGRVNGELLDLRTPIEEDGSL 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE--VQVAIGPIIEDGFYYDFDKEQPFSSD 117
           EIIT + P +L ++RHS AH+MA+A++ ++ +  VQ+ +GP+IE+GFYYD D E+  + +
Sbjct: 61  EIITQDAPEALEIMRHSTAHLMAQAIKRLYKDTKVQLGVGPVIENGFYYDIDMEESITPE 120

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +L +IEK+M++I+  +    ++ +S E+A +LF+   +  K+E++++IPA E VT+Y+QG
Sbjct: 121 DLGKIEKEMKKIVNSNIEIERKEVSREEAIQLFKEVGDELKLELIDAIPAGEKVTIYQQG 180

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           E+FDLCRG HV STG++K+F KL+ VAGAYWRGDS+  ML RIYGTA+ T+ +L ++L  
Sbjct: 181 EFFDLCRGVHVPSTGKIKEF-KLLSVAGAYWRGDSDNQMLQRIYGTAFFTKADLDEHLRL 239

Query: 238 LEESEKRDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEIN 295
           LEE+++RDHRKL +E++LF +  + G G+  W  KG  I + +  Y+  +++   Y+ + 
Sbjct: 240 LEEAKERDHRKLGKELNLFTNSQKVGQGLPLWLPKGATIRRIIERYIVDKEVSLGYQHVY 299

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP +    L++ SGHW+ Y+ +MF     D+         L+PMNCP H+ V+  G+ SY
Sbjct: 300 TPVLGSVELYKTSGHWEHYQDDMFPAMEMDN-----EDLVLRPMNCPHHMMVYKQGIHSY 354

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+  E +++  L+ ++Y
Sbjct: 355 RELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEEFIRVVRLVEAVY 414

Query: 416 KDFGFEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
           KDFGFE    +LS R      K    DA+W+ A++++K  +D +       ++     GE
Sbjct: 415 KDFGFENYSFRLSYRDPADTEKYFDDDAMWEKAQSMLKDAMDEL------DLDYYEAEGE 468

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
            AFYGPK +  +K A+G++    T+Q+DF LP RF+  YV    ++  PV+IHR V  ++
Sbjct: 469 AAFYGPKLDVQVKTALGKEETLSTVQLDFLLPERFDLTYVGEDGKQHRPVVIHRGVVSTM 528

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNET 590
           ERF+  +IE +KG  P WL+P+Q  V  ++ +  ++YA+E+   L+   + +E D R+E 
Sbjct: 529 ERFVAFLIEEYKGAFPTWLAPVQVQVIPVSPTVHLQYAKEVQEQLQLAGIRVELDSRDEK 588

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           I YKIRE  ++KIP +++ GDKE  ++++ +R++G   ++ V     +  +  E+
Sbjct: 589 IGYKIREAQMQKIPYMLVVGDKEVEDKAVNVRKYGEQNSETVDFQAFLQNVKAEA 643


>gi|67459371|ref|YP_246995.1| threonyl-tRNA synthetase [Rickettsia felis URRWXCal2]
 gi|73919821|sp|Q4UKU3|SYT_RICFE RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|67004904|gb|AAY61830.1| Threonyl-tRNA synthetase [Rickettsia felis URRWXCal2]
          Length = 635

 Score =  667 bits (1720), Expect = 0.0,   Method: Composition-based stats.
 Identities = 324/644 (50%), Positives = 442/644 (68%), Gaps = 15/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            I ++FPDGS+K F  + T  +VA +IS SLAK A+   ING++ DLS  +  +  + I+
Sbjct: 1   MINISFPDGSVKQFESNITAFEVANAISMSLAKAAMVAEINGELKDLSTIIENDCKLRIL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   L +IRH  AHI+AEA + ++P++QV IGP IE+GF+YDF K++PF+ D++A I
Sbjct: 61  TAKDSECLEIIRHDAAHIIAEAAKELFPDIQVTIGPAIENGFFYDFAKDKPFTPDDVAMI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M EI+ R+    ++    +KA E F+S  E YK EI+ SIPA E +TLYRQG + DL
Sbjct: 121 EARMHEIVKRNEQITRELWDRDKAVEFFKSIGEHYKAEIIASIPAGEPITLYRQGSFIDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH  STG VK F KLMKVAGAYWRGDS   ML RIYGTAW T+++L  YL+ LEE+E
Sbjct: 181 CRGPHAPSTGFVKHF-KLMKVAGAYWRGDSRNEMLQRIYGTAWATKEQLDNYLFMLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD 301
           KRDHRKL RE+DLFH  E+  G++FWH KGW I+ T+  Y+R+KI+ + Y E+ TP ++D
Sbjct: 240 KRDHRKLGRELDLFHFQEEAQGMVFWHDKGWSIYNTIEQYIRKKIRKNGYTEVKTPVLVD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW+ +R +MFA++  D T       ALKPMNCP HV +F  G+KSYR+LP+R
Sbjct: 300 KSLWEASGHWEKFREDMFALETDDKT------LALKPMNCPCHVQIFKQGIKSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           ++EFG  +RNE SG+LHGLMRVR   QDDAH+FC +EQ+ +E +    L+  +YKDFGF 
Sbjct: 354 MSEFGLCHRNEASGALHGLMRVRSLVQDDAHIFCAEEQITDETVSFCKLLTEVYKDFGFT 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            I VK S RPE R GSD +WD AEN +K  ++             +  GEGAFYGPK E+
Sbjct: 414 DIKVKFSDRPEIRAGSDEVWDKAENALKEAVEKAG------FTYTLNPGEGAFYGPKLEF 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
           +L DAIGR WQCGT+Q+DF LP R +A Y+ +  EK  PVM+HRA+ GS+ERFIGI+IE 
Sbjct: 468 VLTDAIGRQWQCGTLQMDFVLPERLDASYIAASGEKKRPVMLHRAILGSLERFIGILIEE 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  P+WL+PIQ  + TITS   +YA E+   L  + +  + +   + INYKIRE S +
Sbjct: 528 YAGRFPIWLAPIQVAIATITSDLNDYALEVQKALIDNGVRTDINISPDKINYKIREFSNQ 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           KIP+I + G +E   + + IRR G+T  + +S+   I ++ KE+
Sbjct: 588 KIPMIAVIGKQEKENKHVTIRRLGTTDQEVLSIEQLIALIKKEN 631


>gi|56475898|ref|YP_157487.1| threonyl-tRNA synthetase [Aromatoleum aromaticum EbN1]
 gi|73919766|sp|Q5P7X5|SYT_AZOSE RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|56311941|emb|CAI06586.1| threonyl-tRNA synthetase [Aromatoleum aromaticum EbN1]
          Length = 638

 Score =  667 bits (1720), Expect = 0.0,   Method: Composition-based stats.
 Identities = 324/646 (50%), Positives = 438/646 (67%), Gaps = 18/646 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS+++F    T S+VA SI   LAK A+A  ++G++ DLS  +  +  +
Sbjct: 1   MP---NITLPDGSVRSFDHPVTVSEVASSIGAGLAKAALAGKVDGRLVDLSYRIEADTPL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            I+T +    L VIRHS AH++A AV+ ++PE QV IGP+IE+GFYYDF  ++PF+ ++L
Sbjct: 58  AIVTEKGDEGLDVIRHSTAHLLAHAVKELFPEAQVTIGPVIENGFYYDFAYKRPFTPEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IEK+M E+  R+ P  ++    +KA E F+S+ E YK EI+ SIP  E+V+LYRQG++
Sbjct: 118 EKIEKRMAELARREIPVSREVWPRDKAVEFFKSQGEHYKAEIIASIPQAEDVSLYRQGDF 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV STG++K F KL KVAGAYWRGDS   ML RIYGTAW  + +L  YL+ LE
Sbjct: 178 IDLCRGPHVPSTGKLKVF-KLTKVAGAYWRGDSKNEMLQRIYGTAWAKKDDLENYLHMLE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+EKRDHRKL R +DLFHI E+  G++FWH KGW ++Q +  YMRR  + + Y+E+ TPQ
Sbjct: 237 EAEKRDHRKLGRLLDLFHIQEEAPGMVFWHAKGWTLWQQVEQYMRRTILDNGYQEVKTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D+ LW++SGHWD Y   MF       T  + R +A+KPMNCP H+ +FN GLKSYR+L
Sbjct: 297 IVDRSLWEKSGHWDMYSELMFT------TQSEKRDYAVKPMNCPCHIQIFNQGLKSYRDL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFGS +RNEPSG+LHG+MRVR F QDDAH+FC  EQ+  E      L+  +Y DF
Sbjct: 351 PLRMAEFGSCHRNEPSGALHGIMRVRNFVQDDAHIFCADEQVQTEAAAFIELLQKVYADF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF +I++KLSTRP+KRVG+D  WD AE                 +   +  GEGAFYGPK
Sbjct: 411 GFTEILIKLSTRPDKRVGTDDQWDAAEAA------LAAALDAQGLAYDLQPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD + R WQCGT+Q+DFNLP R  A YV   + K +PVM+HRA+ GS+ERFIGI+
Sbjct: 465 IEFSLKDCLNRVWQCGTLQLDFNLPVRLGAEYVAEDNAKHYPVMLHRAILGSLERFIGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE++ G LPLWL+P+ A+V  I+    +YA E+A  LK     +E D RNE INYKIREH
Sbjct: 525 IEHYAGALPLWLAPVHAVVLNISEGQTDYATEVARRLKQAGFRVEADLRNEKINYKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           S+ K+P  I+ G+KE +   + +R  G     ++ L   I    +E
Sbjct: 585 SVHKLPYQIVIGEKEKAAGVVAVRARGGQDLGQMPLDTLIERWQRE 630


>gi|327439263|dbj|BAK15628.1| threonyl-tRNA synthetase [Solibacillus silvestris StLB046]
          Length = 643

 Score =  667 bits (1720), Expect = 0.0,   Method: Composition-based stats.
 Identities = 260/652 (39%), Positives = 412/652 (63%), Gaps = 20/652 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           M   IKLTFPDG++K F    +  DVA SIS  L K  +A  ING + D    +  +G+I
Sbjct: 1   MSEMIKLTFPDGAVKEFAKGTSTLDVAGSISPGLKKSTLAGKINGTLIDAKTGIEQDGAI 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT +   +L ++RHS AH+ A+AV+ ++P+ ++ IGP+I+ GFYYD D   P ++++L
Sbjct: 61  EIITNKSDEALEILRHSTAHLTAQAVKRLYPDAKLGIGPVIDSGFYYDIDSPTPITAEDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEK+M++IIA +    ++ +S ++A++++E   + YK+E+LE+IPA + V++Y QG++
Sbjct: 121 PAIEKEMKKIIAENIEIERKNVSRDEAQKIYEEVGDEYKLELLEAIPADDQVSIYYQGDF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRG HV STG++K+F KL+ +AGAYWRG+S+  ML RIYGTA+ T+ EL  +L  LE
Sbjct: 181 FDLCRGVHVPSTGKLKEF-KLLSLAGAYWRGNSDNKMLQRIYGTAFFTKDELKHHLQMLE 239

Query: 240 ESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTP 297
           E+++RDHRK+ +E+DLF  ++    G+  W   G  I +T+  Y+  +++   Y+ + TP
Sbjct: 240 EAKERDHRKIGKELDLFMTSQTVGQGLPLWLPNGATIRRTIERYIVDKELSLGYKHVYTP 299

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +  + L++ SGHW+ Y+  MF     D+      T  L+PMNCP H+ VF +GL SYR 
Sbjct: 300 VLGSKKLYETSGHWEHYQDGMFPPMEMDN-----ETLVLRPMNCPHHMMVFKNGLHSYRH 354

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AE G+++R E SG++ GL RVRG T +DAH+F   +Q+  E  K+  LI+ +YKD
Sbjct: 355 LPIRIAELGTMHRYEMSGAVSGLQRVRGMTLNDAHIFVRPDQIKAEFKKVVELILEVYKD 414

Query: 418 FGFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           F  +    +LS R           D +W+ A+ ++K  +D +        +  +   E A
Sbjct: 415 FDLKDFSFRLSYRDPNNTEKYFDDDQMWETAQAMLKEAMDELGY------DYFIAEDEAA 468

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  +K AIG++    T Q+DF LP RF+  Y+    +   PV+IHR V  ++ER
Sbjct: 469 FYGPKLDVQVKTAIGKEETLSTAQLDFLLPQRFDLSYIGEDGQPQRPVVIHRGVVSTMER 528

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETIN 592
           F+  +IE +KG  P WL+P+QA +  ++++   +YA+E+   L +  + +E D R E + 
Sbjct: 529 FVAFLIEEYKGAFPTWLAPVQATIIPVSNAVHYDYAREVQEKLAAAGIRVEMDDREEKLG 588

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           YKIRE  ++KIP +++ GDKE +E ++ IRR+GS  ++ +S    +  +T E
Sbjct: 589 YKIREAQMQKIPYMLVLGDKEVAENAVNIRRYGSKDSETISFEQFLADITAE 640


>gi|229017690|ref|ZP_04174581.1| Threonyl-tRNA synthetase [Bacillus cereus AH1273]
 gi|228743616|gb|EEL93725.1| Threonyl-tRNA synthetase [Bacillus cereus AH1273]
          Length = 639

 Score =  667 bits (1720), Expect = 0.0,   Method: Composition-based stats.
 Identities = 280/644 (43%), Positives = 430/644 (66%), Gaps = 17/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEII 62
            I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N +  DL   + E   +EI+
Sbjct: 5   MIEIKFPDGSVKEFVKGITLEEIAGSISSSLKKKAVAGKVNDQSFDLRRNIEESAKVEIV 64

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +    + + RHS AHI+A+AV+ I+  V + +GP+IE+GFYYD D     + ++L +I
Sbjct: 65  TMDSDEGVKIARHSAAHILAQAVKRIYGNVNLGVGPVIENGFYYDMDLPSSVNVEDLPKI 124

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M++II  +    +  +S E+A++LF+   +  K+E+LE+IP  E+VTLY+QGE+ DL
Sbjct: 125 EKEMKKIINENVRIERVEVSREEAKKLFKEMNDHLKLELLEAIPNGESVTLYKQGEFVDL 184

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ STG +K F     V+GAYWRGDSN  +L RIYG A+ +Q+EL +YL+F+EE+ 
Sbjct: 185 CRGPHLPSTGYLKAFQLTH-VSGAYWRGDSNNQVLQRIYGVAFASQKELEEYLHFVEEAA 243

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KR+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R  + + +Y+E+ TP +++
Sbjct: 244 KRNHRKLGSELELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMN 303

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           Q LW++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R
Sbjct: 304 QELWEKSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIR 357

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           + EFG V+R+E SG+L+GL+RVR F QDDAH+F T EQ+ +E   +   I  +YK FGF+
Sbjct: 358 MCEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPEQIEDEIKSVMAQIDYVYKTFGFQ 417

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPE  +G D LW+ AE  +  VL ++           +  G+GAFYGPK ++
Sbjct: 418 Y-EVELSTRPEDSMGDDKLWEQAEAALANVLQSLNY------KYRLNEGDGAFYGPKIDF 470

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+ R  QCGTIQ+DF +P +F+  Y++  +EK  PV+IHRAV GS++RF+ I+IE+
Sbjct: 471 HIKDALNRSHQCGTIQLDFQMPEKFDLNYIDEKNEKRRPVVIHRAVLGSLDRFLAILIEH 530

Query: 542 FKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           F G  P+W++P+Q  V  ++++  V+YA E+A+ L    + +E D R+E + YKIRE  +
Sbjct: 531 FGGAFPVWVAPVQVKVIPVSNAVHVQYANEVAHKLAQAGIRVEEDIRDEKLGYKIREAQM 590

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +K+P +++ GDKE    ++ +R++G   ++ V L   +  + +E
Sbjct: 591 QKVPYVLVIGDKEMESEAVNVRKYGEEESKIVELDAFVESMKEE 634


>gi|126667900|ref|ZP_01738865.1| threonyl-tRNA synthetase [Marinobacter sp. ELB17]
 gi|126627560|gb|EAZ98192.1| threonyl-tRNA synthetase [Marinobacter sp. ELB17]
          Length = 641

 Score =  667 bits (1720), Expect = 0.0,   Method: Composition-based stats.
 Identities = 314/646 (48%), Positives = 436/646 (67%), Gaps = 18/646 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS ++F    T  DVA  I   LAK A+A  ++G + D S  +  +  +
Sbjct: 1   MPV---VTLPDGSHRSFAEAVTVHDVAADIGAGLAKAALAGKVDGTLVDTSYLIENDAQL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT  D   L VIRHS AH++A  V+ ++PE QV IGP+I+DGFYYDF  ++PF++++L
Sbjct: 58  AIITERDEDGLDVIRHSTAHLLAMTVKELFPEAQVTIGPVIDDGFYYDFKYDRPFTNEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A+IEK+M E+  +D P  +  +S  +A ELF S  E YKV I+E IP  E+++ YRQG++
Sbjct: 118 ARIEKRMAELAKQDLPVSRSVMSRSEAVELFSSMGEEYKVRIIEDIPGAEDLSFYRQGDF 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV STG++K F KL KV+GA+WRGD+N   L R+YGTAW  +++L  Y++ +E
Sbjct: 178 IDLCRGPHVPSTGKMKAF-KLTKVSGAFWRGDTNNEQLQRVYGTAWANKKDLKAYVHRIE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+EKRDHRK+ ++++LFH+ E+  G++FWH  GW I+Q +  YMR  +    Y+EI TPQ
Sbjct: 237 EAEKRDHRKVGKKLNLFHMQEEAPGMVFWHPDGWTIYQKMEQYMRDILHRHGYQEIKTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++ + LW++SGHWD ++  MF       T  +   FA+KPMNCP H+ VFN GLKSY++L
Sbjct: 297 IVSRSLWEKSGHWDKFKEGMFT------TESEKHDFAIKPMNCPCHIQVFNQGLKSYKDL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFGS +RNE SG+LHGLMRVRGFTQDDAH+FC +  + NE  K  +L+  +YKDF
Sbjct: 351 PLRLAEFGSCHRNEASGALHGLMRVRGFTQDDAHIFCEESDIQNEVSKFIDLLHEVYKDF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF +I+ KLSTRPEKRVGSD +WD +E  ++  L+      ++ +   +L GEGAFYGPK
Sbjct: 411 GFTEILYKLSTRPEKRVGSDEVWDKSEAALEQALN------REGVKWELLPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD IGR WQCGTIQVDF++P R  A YV  +SE+  PVM+HRAV GS ERFIGI+
Sbjct: 465 IEFSLKDCIGRVWQCGTIQVDFSMPGRLGAQYVADNSERKTPVMLHRAVLGSFERFIGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE ++G  P WL+P Q  +  IT +  EY + +A    S    +  D RNE I +KIREH
Sbjct: 525 IEEYEGAFPSWLAPTQVAILNITDNQREYCENLAKKWDSLGFRVNADLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +I K+P +++ GDKE    ++ +R         +SL     +L ++
Sbjct: 585 TINKVPFLVVVGDKEVENNTVAVRTRKGEDLGTLSLEAFEQLLQED 630


>gi|229196601|ref|ZP_04323345.1| Threonyl-tRNA synthetase [Bacillus cereus m1293]
 gi|228586957|gb|EEK45031.1| Threonyl-tRNA synthetase [Bacillus cereus m1293]
          Length = 639

 Score =  666 bits (1719), Expect = 0.0,   Method: Composition-based stats.
 Identities = 280/644 (43%), Positives = 429/644 (66%), Gaps = 17/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N  + DL   +     +EII
Sbjct: 5   MIEIKFPDGSVKEFVKGITLEEIAGSISNSLKKKAVAGKVNDGLYDLRRNIEGNAEVEII 64

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +    + + RHS AHI+A+A++ I+  V + +GP+IE+GFYYD D     + ++L +I
Sbjct: 65  TLDSNEGVEIARHSAAHILAQAIKRIYGNVNLGVGPVIENGFYYDMDLPSSVNVEDLREI 124

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M++II  +    +  +S E+A +LF+   +  K+E+LE+IP++E+VTLY+QGE+ DL
Sbjct: 125 EKEMKKIINENIKIERVEVSREEAAKLFQEMNDRLKLELLEAIPSEESVTLYKQGEFVDL 184

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ STG +K F     V+GAYWRGDSN  +L RIYG A+++Q+EL +YL+F+EE+ 
Sbjct: 185 CRGPHLPSTGYLKAFQLTH-VSGAYWRGDSNNQVLQRIYGVAFSSQKELEEYLHFVEEAA 243

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KR+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R  + + +Y+E+ TP +++
Sbjct: 244 KRNHRKLGSELELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMN 303

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           Q +W++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R
Sbjct: 304 QEVWERSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIR 357

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           + EFG V+R+E SG+L+GL+RVR F QDDAH+F T EQ+ +E   +   I  +YK FGFE
Sbjct: 358 MCEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPEQIEDEIKSVMAQIDYVYKTFGFE 417

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPE  +G D LW+ AE  +  VL ++           +  G+GAFYGPK ++
Sbjct: 418 Y-EVELSTRPEDSMGDDKLWEQAEAALANVLHSLNC------KYRLNEGDGAFYGPKIDF 470

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+ R  QCGTIQ+DF +P +F+  Y++  +EK  PV+IHRAV GS++RF+ I+IE+
Sbjct: 471 HIKDALNRSHQCGTIQLDFQMPEKFDLNYIDEKNEKRRPVVIHRAVLGSLDRFLAILIEH 530

Query: 542 FKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           F G  P W++P+Q  V  ++++  V+YA EI + L    + +E D R+E + YKIRE  +
Sbjct: 531 FGGAFPAWVAPVQVKVIPVSNAVHVQYADEIVDKLAQAGVRVERDVRDEKLGYKIREAQM 590

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +KIP +++ GDKE    ++ +R++G   ++ V L   +  + +E
Sbjct: 591 QKIPYVLVIGDKEMENGAVNVRKYGEEKSEVVELNGFVESMKEE 634


>gi|330813582|ref|YP_004357821.1| threonyl-tRNA synthetase [Candidatus Pelagibacter sp. IMCC9063]
 gi|327486677|gb|AEA81082.1| threonyl-tRNA synthetase [Candidatus Pelagibacter sp. IMCC9063]
          Length = 638

 Score =  666 bits (1719), Expect = 0.0,   Method: Composition-based stats.
 Identities = 335/644 (52%), Positives = 461/644 (71%), Gaps = 13/644 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +  PDG    +    TG ++A+ IS SL+KKA+A+ +NG+  DL   + ++  I+IIT E
Sbjct: 4   VQLPDGKELTYKNSVTGLEIAKDISISLSKKALALKVNGEYKDLDTEIVKDSKIKIITLE 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D  +L ++RH  AH+ A AVQ ++P  QV IGP+IE+GFYYDF +E+PF+ D+L +IEKK
Sbjct: 64  DEYALELLRHDAAHVCAMAVQELFPGTQVTIGPVIENGFYYDFAREEPFTDDDLIKIEKK 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M EI+ R+    ++    +KA + F+S  E YK EI++SIP  E++++Y  G W DLCRG
Sbjct: 124 MIEIVDRNDKTTREVWDRKKAIDHFKSMGEHYKAEIIDSIPGNEDISIYFHGSWHDLCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PH+ S G++ K FKLMKVAGAYWRGDSN  ML RIYGT W T+++L +YL+ LEE+EKRD
Sbjct: 184 PHLPSIGRIGKSFKLMKVAGAYWRGDSNNVMLQRIYGTCWKTKKDLDEYLHNLEEAEKRD 243

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHL 304
           HRKL + MDLFH  E+  G +FWH+KGW +FQTL+ +MR ++++  Y+E+NTP+++D+ L
Sbjct: 244 HRKLGKTMDLFHFQEESPGAVFWHQKGWALFQTLVDFMRQKQLEAGYQEVNTPEIIDRVL 303

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHW+ ++  M+       +  D RTFA+KPMNCPGH  ++N GLKSY++LP++L+E
Sbjct: 304 WEKSGHWEKFQEYMYTT-----STPDERTFAIKPMNCPGHCQIYNQGLKSYKDLPLKLSE 358

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FG V+R EPSGSLHGLMRVR FTQDDAH+FCT++Q+  E +K+  LI+ IYK FGFE I 
Sbjct: 359 FGKVHRYEPSGSLHGLMRVRSFTQDDAHIFCTEDQITEESVKVTKLILDIYKAFGFENIT 418

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +K + RP KRVG D++WD +E  +   L+ IK S   +++  +  GEGAFYGPK E++L+
Sbjct: 419 LKYADRPAKRVGDDSVWDQSEKAL---LEAIKAS---KVDYTINKGEGAFYGPKIEFVLR 472

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           DAIGRDWQCGT+QVD NLP R +A YV+   +K  PVM+HRA+FGS+ERF GI+IE++ G
Sbjct: 473 DAIGRDWQCGTLQVDLNLPGRLDATYVDKDGKKKTPVMLHRALFGSLERFTGILIEHYAG 532

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
            LPLWLSP+Q  +  I     +YA+EI N L+   +    D RNE INYKIREHS+ KIP
Sbjct: 533 KLPLWLSPVQVAILPINDEHHDYAKEILNQLEKISIRPIIDLRNEKINYKIREHSVGKIP 592

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
           I++ICG KE   ++I +RR G    Q  SL   I  L+KES  P
Sbjct: 593 ILMICGSKEVQNKTITLRRLGQEDQQTESLEKIISSLSKESQAP 636


>gi|325288434|ref|YP_004264615.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Syntrophobotulus
           glycolicus DSM 8271]
 gi|324963835|gb|ADY54614.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Syntrophobotulus
           glycolicus DSM 8271]
          Length = 636

 Score =  666 bits (1718), Expect = 0.0,   Method: Composition-based stats.
 Identities = 282/643 (43%), Positives = 404/643 (62%), Gaps = 16/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+   DGS K F    T  ++A SIS  L + AVA  +N +  DLS  +  +  +EI+
Sbjct: 1   MIKVRLKDGSEKEFQEGITLGELAVSISPGLGRIAVAAKVNNETKDLSSILSTDAEVEIL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +    L ++RHSCAH++A+AVQ ++P     IGP I +GFYYDFD E  F+ ++L +I
Sbjct: 61  TMDSEEGLEIMRHSCAHLLAQAVQELYPGTHFGIGPAIANGFYYDFDSEHIFTPEDLEKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E+KM+++      F +Q L+ ++A   FE K E YKVE++  +P +  +++Y QG++ DL
Sbjct: 121 EQKMKKLAKEGQKFTRQELARQEALSFFEQKGEQYKVELIRDLPEEAVISVYAQGDFADL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPH+ ST  +K F KL  VAGAYWRG     ML RIYG A+  Q EL  +L+ LEE++
Sbjct: 181 CAGPHLPSTKPIKAF-KLQSVAGAYWRGSEKNKMLQRIYGLAFAKQTELDDFLFKLEEAK 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLD 301
           +RDHRKL  E+DLF + ++G G  F+H KG  I   L  + R    K  Y EI TP +L+
Sbjct: 240 RRDHRKLGMELDLFSLHDEGPGFPFFHPKGMVIRNLLEDFWRKEHFKRGYVEIKTPIILN 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+QSGHWD Y+ NM+  K       D   FA+KPMNCPG + ++   L+SYR+LP+R
Sbjct: 300 RALWEQSGHWDHYKENMYFTKI------DGVDFAVKPMNCPGGMIMYKTKLRSYRDLPIR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
             E G V+R+E SG+LHGL+RVR FTQDDAH+F    Q+ +E +++ NL+   YK FGFE
Sbjct: 354 CGELGLVHRHELSGALHGLLRVRNFTQDDAHIFMLPSQIKDEIIRVINLVDDFYKVFGFE 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V++STRPE  +GSD  W+ A   +   L+ +  S        V  G+GAFYGPK ++
Sbjct: 414 YH-VEVSTRPENSMGSDEEWEMATRALTEALEALNMS------YKVNPGDGAFYGPKIDF 466

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            LKD + R WQCGTIQ+DF +P +F+  Y+    EK  PVMIHR V+GSIERFI ++ E+
Sbjct: 467 HLKDCLDRTWQCGTIQLDFQMPEKFDLNYIGEDGEKHRPVMIHRVVYGSIERFIALLTEH 526

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  P+WL+P+Q  +  I+    EYA ++A  LK   +  E D R E I+YK+RE   +
Sbjct: 527 YAGAFPVWLAPVQVRILPISDKHSEYAAKVAETLKEMDIRTEIDERREKISYKVREAQTE 586

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K+P  ++ GD+EA E S+ +RR+G   T K+S  + +  + +E
Sbjct: 587 KVPFALVVGDQEAEEGSLAVRRYGEQNTVKMSREEFLATIIEE 629


>gi|221320079|ref|ZP_03601373.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           JH642]
          Length = 643

 Score =  666 bits (1718), Expect = 0.0,   Method: Composition-based stats.
 Identities = 256/653 (39%), Positives = 413/653 (63%), Gaps = 20/653 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M   +K+TFPDG++K F    T  D+A SIS  L KK++A  +NGK  DL  P+  +G++
Sbjct: 1   MSDMVKITFPDGAVKEFAKGTTTEDIAASISPGLKKKSLAGKLNGKEIDLRTPINEDGTV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT      L ++RHS AH++A+ ++ I+ +V+  +GP+IE+GFYYD + ++  + ++L
Sbjct: 61  EIITEGSEEGLQIMRHSAAHLLAQTIKRIYKDVKFGVGPVIENGFYYDVEMDEAITPEDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IEK+M++I+  + P +++ +S E+A+  F    +  K+E+L++IP  E V++Y QGE+
Sbjct: 121 PKIEKEMKKIVNANLPIVRKEVSREEAKARFAEIGDDLKLELLDAIPEGETVSIYEQGEF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRG HV STG++K+F KL+ +AGAYWRGDS   ML R+YGTA+  + +L ++L  LE
Sbjct: 181 FDLCRGVHVPSTGKIKEF-KLLSLAGAYWRGDSKNQMLQRVYGTAFFKKADLEEHLRMLE 239

Query: 240 ESEKRDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTP 297
           E+++RDHRKL +E+ LF +  + G G+  W  KG  I + +  Y+  ++I   YE + TP
Sbjct: 240 EAKERDHRKLGKELKLFANSQKVGQGLPLWLPKGATIRRVIERYIVDKEISLGYEHVYTP 299

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +  + L++ SGHWD Y+  MF     D+      T  L+PMNCP H+ ++   + SYRE
Sbjct: 300 VLGSKELYETSGHWDHYQEGMFPPMEMDN-----ETLVLRPMNCPHHMMIYKQDIHSYRE 354

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+ +E ++   LI  +Y+D
Sbjct: 355 LPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKDEFIRTVRLIQDVYED 414

Query: 418 FGFEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           FG      +LS R      K    D +W+ A++++K  +D I +      +     GE A
Sbjct: 415 FGLSDYTFRLSYRDPEDTEKYFDDDEMWNKAQSMLKEAMDEIGH------DYYEAEGEAA 468

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  +K AIG++    T+Q+DF LP RF+  Y+    ++  PV+IHR V  ++ER
Sbjct: 469 FYGPKLDVQVKTAIGKEETLSTVQLDFLLPERFDLTYIGEDGKQHRPVVIHRGVVSTMER 528

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETIN 592
           F+  +IE  KG LP WL+P+Q  V  ++ +  ++YA+++   L+   L +E D R+E I 
Sbjct: 529 FVAFLIEEHKGALPTWLAPVQFQVIPVSPAVHLDYAKKVQERLQCEGLRVEVDSRDEKIG 588

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           YKIRE  ++KIP +++ GD+EA   ++ +R++G   ++ +SL + +     E+
Sbjct: 589 YKIREAQMQKIPYMLVVGDQEAENGAVNVRKYGEQNSETISLDEFVKKAVAEA 641


>gi|260575744|ref|ZP_05843741.1| threonyl-tRNA synthetase [Rhodobacter sp. SW2]
 gi|259022142|gb|EEW25441.1| threonyl-tRNA synthetase [Rhodobacter sp. SW2]
          Length = 648

 Score =  666 bits (1718), Expect = 0.0,   Method: Composition-based stats.
 Identities = 329/653 (50%), Positives = 439/653 (67%), Gaps = 10/653 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           + I LTFPDG+ ++F    T ++VA SIS SLAKKA++  ++G   DL  P+  +  I I
Sbjct: 2   AQISLTFPDGNRRDFAPGVTPAEVAASISTSLAKKAISATVDGAHHDLQWPINADARIAI 61

Query: 62  ITPEDP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            T  D  ++L +IRH  AH+MA AVQ +WP+V+V IGP+I+DG+YYDFD+ +PF+ ++L 
Sbjct: 62  HTMADEAQALELIRHDLAHVMARAVQELWPDVKVTIGPVIKDGWYYDFDRIEPFTPEDLG 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEK+M+EII        +     +A   +E K E +KVE++  IP  E + +Y  G W 
Sbjct: 122 AIEKRMKEIINLRDVVRTEVWDRPRAIAHYEQKGEPFKVELIHGIPGDEPLRMYWHGHWQ 181

Query: 181 DLCRGPHVRSTGQ-VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           DLCRGPH++ TGQ     FKLM VAGAYWRGDSNRPML RIYG A+  + EL  +L  LE
Sbjct: 182 DLCRGPHLQHTGQLPADAFKLMSVAGAYWRGDSNRPMLQRIYGVAFKNRDELKAHLTMLE 241

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+ KRDHR+L +EMDLFH+ E+  G++FWH  GW++++TL  YMRR+ ++  Y EI TPQ
Sbjct: 242 EAAKRDHRRLGKEMDLFHLQEEAPGMVFWHPNGWQVWRTLEDYMRRRQREAGYREIRTPQ 301

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHW++YR NMF V+  ++  K+ R  ALKPMNCP HV V+N GLKSYR+L
Sbjct: 302 VVDRVLWERSGHWEAYRENMFIVEVDEEGAKEKRINALKPMNCPCHVQVYNQGLKSYRDL 361

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFG+ +R E SGS+HGLMRVRGFTQDDAH+FCT+ Q+ +EC     L+ S+Y D 
Sbjct: 362 PLRLAEFGACHRYESSGSMHGLMRVRGFTQDDAHIFCTEAQIESECAAFIELLSSVYHDL 421

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE   +KLSTRPE R+G+D  WD  E  ++  +  +  S        +  GEGAFYGPK
Sbjct: 422 GFESFDIKLSTRPEVRIGTDEDWDRVETALENAIKKVGRS------YVIDPGEGAFYGPK 475

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++ L DAIGR WQCGT QVD NLPSR  A Y+     +  P M+HRA+ GS ERF+GI+
Sbjct: 476 LDFKLTDAIGRQWQCGTFQVDPNLPSRLGAEYIGEDGARHRPFMLHRAILGSFERFLGIL 535

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IEN+ G LP WL+P Q +V  I S A  Y  E+   L+   +  E D RNE INYK+REH
Sbjct: 536 IENYAGKLPFWLAPRQVVVAGIVSDADAYVHEVVAELRKAGVRAEADVRNEKINYKVREH 595

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           S+ K+P+I+  G KE  ERS+ +RR G T T   SL   +  L  E+  PD +
Sbjct: 596 SVGKVPVILAIGMKEVEERSVSVRRLGETRTDSESLTGIVATLAHEAKAPDLR 648


>gi|126735278|ref|ZP_01751024.1| threonyl-tRNA synthetase [Roseobacter sp. CCS2]
 gi|126715833|gb|EBA12698.1| threonyl-tRNA synthetase [Roseobacter sp. CCS2]
          Length = 648

 Score =  666 bits (1718), Expect = 0.0,   Method: Composition-based stats.
 Identities = 326/652 (50%), Positives = 437/652 (67%), Gaps = 10/652 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           + I LTFPDG+ +++    T +DVA  IS SL KKA++  ++G+  DL  P+  + +I I
Sbjct: 2   AQISLTFPDGNSRSYEAGVTAADVAADISSSLRKKAISATVDGQHWDLQWPIEADSAIGI 61

Query: 62  ITPEDPR-SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            T +D   +L ++RH  AHIMA AVQ IWP+ QV IGP+I+DG+YYDFD+++PF+ ++L+
Sbjct: 62  NTMKDQEPALELVRHDLAHIMARAVQEIWPDTQVTIGPVIKDGWYYDFDRKEPFTPEDLS 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEKKM+EII +      +      A + ++ + E YKVE++ESIP +E + +Y  G+W 
Sbjct: 122 TIEKKMKEIINKRDEVRTEIWERNVAIQYYKDRGEPYKVELIESIPGEEPLRMYWHGDWQ 181

Query: 181 DLCRGPHVRSTGQ-VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           DLCRGPH++ TGQ     FKLM +AGAYWRGDS+R ML RIYGTA+  ++ L  +L+ LE
Sbjct: 182 DLCRGPHLQHTGQVPADGFKLMSIAGAYWRGDSDRAMLQRIYGTAFTNKEGLKAHLHMLE 241

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQ 298
           E+ KRDHRKL REM+LFH+ E+  G +FWH  GW ++  L  Y+RRK +   Y EINTPQ
Sbjct: 242 EAAKRDHRKLGREMNLFHMQEEAPGQVFWHPNGWTVYTELQDYVRRKQRAGDYREINTPQ 301

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW+ SGHWD Y  +MF V+  ++  K+    ALKPMNCP HV VFN GLKSYR+L
Sbjct: 302 VVDRKLWEASGHWDKYHEHMFVVEVEEEHAKEKAINALKPMNCPCHVQVFNQGLKSYRDL 361

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFGS  R EPSG+LHG+MRVRGFTQDD H+FCT+EQ+  EC +  N +  IYKD 
Sbjct: 362 PLRLAEFGSCARYEPSGALHGIMRVRGFTQDDGHIFCTEEQIETECARFINFLADIYKDL 421

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE   +  +TRPEKRVGSD  WD  E  ++  + +         +  +  G+GAFYGPK
Sbjct: 422 GFEDFEIAFATRPEKRVGSDESWDHVEGALEAAIKSTGR------DFRLEPGDGAFYGPK 475

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++ L DA+GR WQCGT QVD NLP R  A Y+     K  P M+HRA  GS ERFIGI+
Sbjct: 476 LDFYLTDALGRTWQCGTFQVDPNLPERLGATYIGQDGSKHRPFMLHRATLGSFERFIGIL 535

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE   G LP WL+P Q +V TI S A +YA E+ N LK+  +  E D RNE IN+K+REH
Sbjct: 536 IEEHAGKLPFWLAPRQVVVATIVSDADDYAMEVVNALKAVGVRAEADLRNEKINFKVREH 595

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDC 650
           S+ K+P+I+  G +E  E+++  RR G   T   SL + +  L + S PPD 
Sbjct: 596 SVGKVPVILALGAREVEEKTVTARRLGENKTSVTSLTEIVAELGRASTPPDL 647


>gi|229096864|ref|ZP_04227833.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-29]
 gi|228686474|gb|EEL40383.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-29]
          Length = 639

 Score =  666 bits (1717), Expect = 0.0,   Method: Composition-based stats.
 Identities = 279/644 (43%), Positives = 430/644 (66%), Gaps = 17/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEII 62
            I++ FPDGS+K F    T  ++A SIS SL +KAVA  +N ++ DL   + E   +EII
Sbjct: 5   MIEIKFPDGSVKEFVKGITLEEIAGSISSSLKRKAVAGKVNDQLYDLRRNIEENAEVEII 64

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +    + + RHS AHI+A+AV+ ++ ++ + +GP+IE+GFYYD D     + ++L +I
Sbjct: 65  TIDSNDGVEIARHSAAHILAQAVKRLYGDINLGVGPVIENGFYYDMDLPSSVNVEDLPKI 124

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M+ II  +    +  +S E+A +LF+   +  K+E+LE+IP+ E+VTLY+QGE+ DL
Sbjct: 125 EKEMRNIIKENISIERVEVSREEAAKLFQEMNDRLKLELLEAIPSGESVTLYKQGEFVDL 184

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV ST  +K F     V+GAYWRGDSN  +L RIYG A+++Q+EL +YL+F+EE+ 
Sbjct: 185 CRGPHVPSTSYLKAFQLTH-VSGAYWRGDSNNQVLQRIYGVAFSSQKELEEYLHFVEEAA 243

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KR+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R  + + +Y+E+ TP +++
Sbjct: 244 KRNHRKLGNELELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMN 303

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           Q +W++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R
Sbjct: 304 QEVWERSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIR 357

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           + EFG V+R+E SG+L+GL+RVR F QDDAH+F T EQ+ +E   +   I  +YK FGFE
Sbjct: 358 MCEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPEQIEDEIKSVMGQIDYVYKTFGFE 417

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPE  +G D LW+ AE  ++ VL ++           +  G+GAFYGPK ++
Sbjct: 418 Y-EVELSTRPEDSMGDDKLWEQAEAALENVLQSLNY------KYRLNEGDGAFYGPKIDF 470

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+ R  QCGTIQ+DF +P +F+  Y++  +EK  PV+IHRAV GS++RF+ I+IE+
Sbjct: 471 HIKDALNRSHQCGTIQLDFQMPEKFDLNYIDVKNEKKRPVVIHRAVLGSLDRFLAILIEH 530

Query: 542 FKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           F G  P W++P+Q  V  ++++  V+YA E+A+ L    + IE D R+E + YKIRE  +
Sbjct: 531 FGGAFPAWVAPVQVKVIPVSNAVHVQYANEVADKLAQAGVRIERDVRDEKLGYKIREAQM 590

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +KIP +++ GD+E     + +R++G   ++ V+L      + +E
Sbjct: 591 QKIPYVLVIGDREMENGFVNVRKYGEEKSEVVALDVFAASMEEE 634


>gi|149185120|ref|ZP_01863437.1| threonyl-tRNA synthetase [Erythrobacter sp. SD-21]
 gi|148831231|gb|EDL49665.1| threonyl-tRNA synthetase [Erythrobacter sp. SD-21]
          Length = 671

 Score =  666 bits (1717), Expect = 0.0,   Method: Composition-based stats.
 Identities = 306/672 (45%), Positives = 430/672 (63%), Gaps = 23/672 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           M   +K++ PDGS++     +T +DVA +I   LAK A+A  ++G++ D++ P   +  +
Sbjct: 1   MTELLKISLPDGSVREMEPGSTPADVAAAIGPGLAKAAIAARVDGELRDINRPFEGDAEL 60

Query: 60  EIITPEDP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF---DKEQPFS 115
            ++T  D   +L + RH  AH++AEAVQS++P  Q+  GP  +DGFYYD    D  +PFS
Sbjct: 61  ALVTGRDEKDALELARHDFAHVLAEAVQSLFPGTQITFGPATDDGFYYDVKASDTREPFS 120

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            D+L  IE++M+ II  D P  ++  S ++  + +E++ E +K E  + +P  E +T+Y 
Sbjct: 121 MDDLPAIEEEMRRIIKADKPLRREVWSRQQLIDKWEAEGEVFKAEWAKELPEDEELTVYW 180

Query: 176 QG-EWFDLCRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQ 233
            G +W D+CRGPH+ STG++  + FKLM+VAGAYWRGD     L+RIYGT W  +++L  
Sbjct: 181 SGEDWLDMCRGPHLASTGKLDPQAFKLMRVAGAYWRGDQKNAQLTRIYGTGWLNKKQLNA 240

Query: 234 YLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYE 292
           +L  LEE+ KRDHRKL REMDLFH+ E+  G +FWH  G++I++ L +YMRRK+    Y 
Sbjct: 241 HLTRLEEAAKRDHRKLGREMDLFHLQEEAHGSVFWHPNGYRIWRELEAYMRRKMDGAGYR 300

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT-------------IKDLRTFALKPM 339
           EI TPQ++D   W  SGHW  Y  NMFAV                     D    A+KPM
Sbjct: 301 EIKTPQLMDVRQWTASGHWGKYAENMFAVPDIVPDVDDSGAASAHPKVADDADWMAIKPM 360

Query: 340 NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQ 399
           NCP HV VF  G+ SYR+LP+RL E G  +RNEP G+LHGLMRVR FTQDDAH+FC++ Q
Sbjct: 361 NCPAHVLVFKQGITSYRDLPIRLGEMGCCHRNEPHGALHGLMRVRQFTQDDAHIFCSESQ 420

Query: 400 MFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSS 459
           +  E      L  S+YKDFGF    +KL+ RPEKR+GSDA WD AE  ++  ++     +
Sbjct: 421 VVEEVRAFCKLAESVYKDFGFT-FAIKLALRPEKRLGSDADWDKAEQELRDAVEEAGMMN 479

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
           ++      L GEGAFY PK E+ L DAIGR WQ GTIQ D  LP R +A YV    EK  
Sbjct: 480 EE-FGWEELPGEGAFYAPKLEWHLTDAIGRTWQVGTIQGDRVLPERLDASYVGEDGEKHR 538

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH 579
           PVM+HRA+FGS ERFIGI+IE++ G +P+WL+P QA+V TI S A +YA+E    L++  
Sbjct: 539 PVMLHRAIFGSYERFIGILIEHYAGRMPVWLAPTQAVVATIVSDADDYAKEAVAKLEAAG 598

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
           + + +D RNE INYK+REHS  K+P +++ G++EA E ++ +R  G    + + L +AI 
Sbjct: 599 IRVASDLRNEKINYKVREHSHAKVPHLLVVGNREAEEGTVAVRTLGQQHQKVMPLEEAIA 658

Query: 640 ILTKESLPPDCQ 651
           +L  E+ PPD +
Sbjct: 659 MLKAEATPPDLR 670


>gi|221134666|ref|ZP_03560969.1| threonyl-tRNA synthetase [Glaciecola sp. HTCC2999]
          Length = 637

 Score =  666 bits (1717), Expect = 0.0,   Method: Composition-based stats.
 Identities = 295/641 (46%), Positives = 420/641 (65%), Gaps = 17/641 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  DVA  I   LAK  +A  ING++ D  D +  +  ++IIT  
Sbjct: 4   ITLPDGSTREFDQAVSIMDVANDIGPGLAKATIAGKINGELADACDLITCDAQLQIITAR 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ ++P+V++AIGP I++GFYYD D E   + D+L  IEK+
Sbjct: 64  DEAGLEIIRHSCAHLIGHAIKQLFPDVKMAIGPTIDNGFYYDVDLEHSLTQDDLDNIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M ++       +K   S + AR+ FE + E+YK+EIL E+I   +   LY   E+ D+CR
Sbjct: 124 MLQLAKTSYDVVKNVGSWQTARDTFEQRGESYKLEILDENISQDDTPALYVHEEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +    + F K+MKVAGAYWRG+S   ML RIYGTAW  +++L  YL  LEE+EKR
Sbjct: 184 GPHVPNMRFCQHF-KIMKVAGAYWRGNSENKMLQRIYGTAWADKKQLKAYLNRLEEAEKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQH 303
           DHRK+ + +DLFH  E+  G++FWH  GW I+  L S++R+K+ + DY+E+  P ++D+ 
Sbjct: 243 DHRKIGKTLDLFHWQEEAPGMVFWHNDGWSIYTELESFIRKKLTQYDYQEVKGPLMMDRS 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SGHW  Y +NMF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKSGHWGKYSSNMFT------TESEKREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFG  +RNEPSG+LHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++   Y+ FGFEKI
Sbjct: 357 EFGCCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQILDEVSGCIKMVYDTYETFGFEKI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPE+RVGSD +WD  E+ +   L        + I      GEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEERVGSDDIWDKTESALADALKA------NDIEFDYQPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF++P R  + YV    E+  PVMIHRA+ GS+ERFIGI+ E + 
Sbjct: 471 HDCLDRAWQCGTVQLDFSMPGRLGSTYVAEDGERKVPVMIHRAILGSLERFIGILTEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G+ P WL+P QA++  IT    EY  ++    ++  + ++ D RNE I +KIREH++K++
Sbjct: 531 GHFPTWLAPTQAVILNITDKQSEYCTKLQKTARNA-IRVKPDLRNEKIGFKIREHTLKRV 589

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P +++ GDKE     + +R        K+S+ D +  +  +
Sbjct: 590 PYMLVVGDKEMEAGEVAVRTRKGDDLGKMSIEDFLIKVRTD 630


>gi|47565742|ref|ZP_00236782.1| threonyl-tRNA synthetase [Bacillus cereus G9241]
 gi|47557378|gb|EAL15706.1| threonyl-tRNA synthetase [Bacillus cereus G9241]
          Length = 639

 Score =  666 bits (1717), Expect = 0.0,   Method: Composition-based stats.
 Identities = 278/644 (43%), Positives = 432/644 (67%), Gaps = 17/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEII 62
            I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N  + DL   + E   +EI+
Sbjct: 5   MIEIKFPDGSVKEFVKGITLEEIAGSISGSLKKKAVAGKVNDGLYDLRRNIEENAEVEIV 64

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +    + + RHS AHI+A+A++ I+  V + +GP+IE+GFYYD D     + ++L +I
Sbjct: 65  TIDSNEGVEIARHSAAHILAQAIKRIYGNVNLGVGPVIENGFYYDMDLPSSVNVEDLREI 124

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M++II  +    +  +S E+A +LF+   +  K+E+LE+IP++E+VTLY+QGE+ DL
Sbjct: 125 EKEMKKIINENIKIERVEVSREEAAKLFQEMNDRLKLELLEAIPSEESVTLYKQGEFVDL 184

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ STG +K F     V+GAYWRGDSN  +L RIYG A+++Q+EL +YL+F+EE+ 
Sbjct: 185 CRGPHLPSTGYLKAFQLTH-VSGAYWRGDSNNQVLQRIYGVAFSSQKELEEYLHFVEEAA 243

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KR+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R  + + +Y+E+ TP +++
Sbjct: 244 KRNHRKLGSELELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMN 303

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           Q +W++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R
Sbjct: 304 QEVWERSGHWGHYKDNMYFSEV------DHKSFALKPMNCPGHMLMFKNKLHSYRELPIR 357

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           + EFG V+R+E SG+L+GL+RVR F QDDAH+F T EQ+ +E   +   I  +YK FGF+
Sbjct: 358 MCEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPEQIEDEIKSVMKQIDYVYKIFGFQ 417

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPE  +G D LW+ AE+ +  VL ++           +  G+GAFYGPK ++
Sbjct: 418 Y-EVELSTRPEDSMGDDKLWEQAESALANVLHSLNY------KYRLNEGDGAFYGPKIDF 470

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+ R  QCGTIQ+DF +P +F+  Y++  +EK  PV+IHRAV GS++RF+ I+IE+
Sbjct: 471 HIKDALNRSHQCGTIQLDFQMPEKFDLNYIDEKNEKRRPVVIHRAVLGSLDRFLAILIEH 530

Query: 542 FKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           F G  P W++P+Q  V  ++++  V+YA EIA+ L    + +E D R+E + YKIRE  +
Sbjct: 531 FGGAFPAWVAPVQVKVIPVSNAVHVQYADEIADKLAQAGVRVERDVRDEKLGYKIREAQM 590

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +K+P +++ GDKE    ++ +R++G   ++ + L   +  + +E
Sbjct: 591 QKVPYVLVIGDKEMENGAVNVRKYGEEKSEVIELNGFVESIKEE 634


>gi|229144961|ref|ZP_04273357.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|228638483|gb|EEK94917.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
          Length = 640

 Score =  666 bits (1717), Expect = 0.0,   Method: Composition-based stats.
 Identities = 278/644 (43%), Positives = 431/644 (66%), Gaps = 17/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEII 62
            I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N  + DL   + E   +EII
Sbjct: 5   MIEIKFPDGSVKEFVKGITLEEIAGSISSSLKKKAVAGKVNDGLYDLRRNIEENAEVEII 64

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +    + + RHS AHI+A+AV+ ++ ++ + +GP+IE+GFYYD D     + ++L +I
Sbjct: 65  TIDSNEGVEITRHSAAHILAQAVKRMYGDINLGVGPVIENGFYYDMDLPSSVNVEDLRKI 124

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M++II  +    +  +S E+A +LF+   +  K+E+LE+IP+ E+VTLY+QGE+ DL
Sbjct: 125 EKEMKKIINENIKIERVEVSREEAAKLFQEMNDRLKLELLEAIPSGESVTLYKQGEFVDL 184

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ STG +K F     V+GAYWRGDSN  +L RIYG A++ Q+EL +YL+F+EE+ 
Sbjct: 185 CRGPHLPSTGYLKAFQLTH-VSGAYWRGDSNNQVLQRIYGVAYSFQKELEEYLHFVEEAT 243

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KR+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R  + + +Y+E+ TP +++
Sbjct: 244 KRNHRKLGNELELFMFSEEAPGMPFYLPKGQMIRNELEAFLREIQKEYNYQEVRTPFMMN 303

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           Q +W++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R
Sbjct: 304 QEVWERSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIR 357

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           + EFG V+R+E SG+L+GL+RVR F QDDAH+F T +Q+ NE   +   I  +YK FGFE
Sbjct: 358 MCEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPKQIENEIKSVMAQIDYVYKTFGFE 417

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPE  +G D LW+ AE  ++ VL ++           +  G+GAFYGPK ++
Sbjct: 418 Y-EVELSTRPEDSMGDDKLWEQAEAALENVLQSLNY------KYRLNEGDGAFYGPKIDF 470

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+ R  QCGTIQ+DF +P +F+  Y++ ++EK  PV+IHRAV GS++RF+ I+IE+
Sbjct: 471 HIKDALNRSHQCGTIQLDFQMPEKFDLNYIDENNEKKRPVVIHRAVLGSLDRFLAILIEH 530

Query: 542 FKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           F G  P W++P+Q  V  ++++   +YA EIA  L    + +E D R+E + YKIRE  +
Sbjct: 531 FGGAFPAWVAPVQVKVIPVSNAVHEQYANEIALKLAQAGVRVEQDARDEKLGYKIREAQM 590

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +K+P +++ GDKE    ++ +R++G   ++ ++L   +  + +E
Sbjct: 591 QKVPYVLVIGDKEMENGAVNVRKYGEEKSEVIALDVFVATIEEE 634


>gi|197118372|ref|YP_002138799.1| threonyl-tRNA synthetase [Geobacter bemidjiensis Bem]
 gi|238690868|sp|B5EBX9|SYT_GEOBB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|197087732|gb|ACH39003.1| threonyl-tRNA synthetase [Geobacter bemidjiensis Bem]
          Length = 636

 Score =  666 bits (1717), Expect = 0.0,   Method: Composition-based stats.
 Identities = 281/645 (43%), Positives = 414/645 (64%), Gaps = 18/645 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEI 61
           ++I +T PDGS +  P  A+  D+A SI   LAK A+A  I+G + DL+ P+ +G+ +EI
Sbjct: 2   NEINVTLPDGSQRPLPAGASIFDLAASIGAGLAKAAIAGKIDGNLVDLNTPLADGARVEI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           IT + P +L +IRHS +H+MA+AV++++P+ +V IGP IE GFYYDFD + PF+ ++L +
Sbjct: 62  ITEKSPEALEIIRHSTSHLMAQAVKALFPQAKVTIGPAIETGFYYDFDVDHPFTPEDLEK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE+KM+E+   D    ++ L+   A  LF+   E YKVE++E + A   V+LY QG++ D
Sbjct: 122 IEEKMRELAKADLKIERKELTSADAIALFKGMGENYKVELIEDLGAD-KVSLYSQGDFVD 180

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+  T  +K F KL  +AGAYWRGD  RPML R+YGTA+  ++EL  YL  +EE+
Sbjct: 181 LCRGPHLPKTSFIKAF-KLTSIAGAYWRGDEKRPMLQRVYGTAFGDKKELEAYLARIEEA 239

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQV 299
           +KRDHRKL RE+DLF   ++   G++ WH KG  +   L  + R   +K  Y+ +  PQ+
Sbjct: 240 KKRDHRKLGRELDLFSFNDEVGAGLVIWHPKGAMLRTILEDFERKEHLKRGYDIVLGPQI 299

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           L   LWQ+SGH+++YR NM+       T  D +++ +KPMNC  H+ ++   L+SYR+LP
Sbjct: 300 LKTELWQRSGHYENYRENMYF------TTVDEQSYGVKPMNCLAHMMIYRSQLRSYRDLP 353

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R  E G+V+R+E +G LHGL+RVRGFTQDDAH+ CT EQ+  E   +   +  +   FG
Sbjct: 354 LRYFELGTVHRHERAGVLHGLLRVRGFTQDDAHILCTPEQLDAEIKGVIQFVTEVMGIFG 413

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           FE  M +LSTRPEK +GSD  W+ A N +   L              +  G+GAFYGPK 
Sbjct: 414 FEFEM-ELSTRPEKSIGSDDAWELATNALLNALKDSGRP------YEINEGDGAFYGPKI 466

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +  L+DA+ R WQC TIQ DF LP RF+  YV++  EK  PVM+HR + G+IERFIG++I
Sbjct: 467 DIKLRDALDRRWQCATIQCDFTLPERFDLTYVDADGEKKRPVMVHRVILGAIERFIGVLI 526

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E+F GN P WL+P+QA + T+T + + YAQ   + L++  + ++ DFRNE + +KIRE  
Sbjct: 527 EHFAGNFPTWLAPVQATIVTVTDNQIPYAQAAFDKLRAAGIRVQKDFRNEKLGFKIREAQ 586

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           ++KIP +++ GDKE     +  R       + ++    +  +  E
Sbjct: 587 LQKIPYMLVVGDKEVESGMLAPRFRDGKNLESMTPEQFVSFIESE 631


>gi|154706797|ref|YP_001424763.1| threonyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
 gi|154356083|gb|ABS77545.1| threonyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
          Length = 660

 Score =  666 bits (1717), Expect = 0.0,   Method: Composition-based stats.
 Identities = 298/646 (46%), Positives = 427/646 (66%), Gaps = 18/646 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP    +  PDGS+K F    +   VAESI  SLAK A+A  I+  + D+S  + ++ S+
Sbjct: 10  MP---TIQLPDGSVKQFSKPVSVQAVAESIGTSLAKAALAGKIDDHLVDVSFIIDKDVSL 66

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +DP  L VIRHS AH++A AV+ ++P+ +V IGP++EDGFYYDF  E+ F+ ++L
Sbjct: 67  RIITEKDPEGLEVIRHSAAHLLAHAVKELFPKAEVTIGPVVEDGFYYDFAFERSFTPEDL 126

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IE+KM+ +   D    ++ LS ++A  LF+   E YKVEI+  IP +E +T Y+QG++
Sbjct: 127 EKIEEKMRSLAKADLAVERRVLSRDEALTLFKKMGERYKVEIIRDIPKEEILTAYQQGDF 186

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV  TG +K F KL K+AGAYWRGDSN  ML RIYGTAW   + L  YLY LE
Sbjct: 187 IDLCRGPHVPRTGMLKAF-KLTKLAGAYWRGDSNNEMLQRIYGTAWADTKALKAYLYRLE 245

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQ 298
           E+EKRDHR LA++MDLFH   +  G +FWH  GW I   +  Y+R    K  Y+E++TPQ
Sbjct: 246 EAEKRDHRLLAKKMDLFHFQPESPGNVFWHPNGWSIILQMREYIRHITHKYGYQEVHTPQ 305

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D  LW +SGH   +  ++F++        + + + +KPM+CP HV +FN G+KSYR+L
Sbjct: 306 LIDASLWDKSGHLGKFGDDIFSL------PLEPQQYVIKPMSCPAHVQIFNQGVKSYRDL 359

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R AEFG+ +RNEPSG+LHGLMR+RGF QDDAH+FCT++Q+ +E     + +  +Y DF
Sbjct: 360 PLRYAEFGACHRNEPSGTLHGLMRLRGFVQDDAHIFCTEDQIQSEVSAFIDQLHEVYADF 419

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF +++ KLSTRPEKRVGSD +W  AE  +   L+      +  +   +L GEGAFYGPK
Sbjct: 420 GFTEVIHKLSTRPEKRVGSDEVWTKAEQALAEALN------RKGVEWDILPGEGAFYGPK 473

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ L+D +GR WQCGT+QVDF++P R  A Y+     K  PVMIHRA+ GS ERF+GI+
Sbjct: 474 IEFSLRDCLGRIWQCGTVQVDFSVPERLGAHYIAEDGSKKPPVMIHRAILGSFERFLGIL 533

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           +E   G LPLWL+P+Q +V  IT    +Y  +    L++  +   +D RNE I +KIREH
Sbjct: 534 LEESAGKLPLWLAPVQVVVMNITDRQADYVGQTVENLQNLGIRAHSDLRNEKIGFKIREH 593

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +I ++P +++ GD+E +++++ +R      +  ++L +    L  E
Sbjct: 594 TIARVPYLVVIGDREVADKTLSVRALEDEASTTITLEEFARQLKAE 639


>gi|226941673|ref|YP_002796747.1| threonyl-tRNA synthetase [Laribacter hongkongensis HLHK9]
 gi|254783525|sp|C1DDA6|SYT_LARHH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|226716600|gb|ACO75738.1| Syt [Laribacter hongkongensis HLHK9]
          Length = 633

 Score =  665 bits (1716), Expect = 0.0,   Method: Composition-based stats.
 Identities = 327/648 (50%), Positives = 443/648 (68%), Gaps = 18/648 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP+   +  PDGS++ F    +  DVA SI   LA+ A+A  ++G + D S  +  +  +
Sbjct: 1   MPA---IRLPDGSVRQFENPVSVHDVAASIGAGLARAALAGRVDGALVDTSFVIDHDVDL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            I+T +D   L ++RHS AH++A AV+ ++PE QV IGP IE+GFYYDF  ++PF+ ++L
Sbjct: 58  AIVTDKDADGLGILRHSTAHLLACAVKELFPEAQVTIGPEIENGFYYDFSYKRPFTPEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM E+  +D P  +  L  ++A   F+S  EAYK EI+ESIP  E ++LYR+G +
Sbjct: 118 VAIEKKMAELAKKDIPVERYELPRDEAIAYFKSIGEAYKAEIIESIPQGEVLSLYREGNF 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV STG++K F KLMKVAGAYWRGDS   ML RIYGTAW  +++L  YL+ LE
Sbjct: 178 TDLCRGPHVPSTGKLKVF-KLMKVAGAYWRGDSKNEMLQRIYGTAWAKKEDLEAYLHMLE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+EKRDHRKL R++DLFHI ++  G++FWH KGW ++Q +  YMRR +  +DY+E+ TPQ
Sbjct: 237 EAEKRDHRKLGRQLDLFHIQDEAPGMVFWHPKGWTLWQQVEQYMRRVLIANDYQEVRTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D+ LW++SGHW  Y+  MF       T  + R +A+KPMNCP H+ +FN GLKSYR+L
Sbjct: 297 IVDRSLWEKSGHWAMYQDLMFT------TESEKRDYAVKPMNCPCHIQIFNQGLKSYRDL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFGS +RNEPSGSLHG+MRVR F QDDAH+FCT+ QM  E     +L+ ++Y+DF
Sbjct: 351 PLRMAEFGSCHRNEPSGSLHGIMRVRNFVQDDAHIFCTEAQMQPETAAFIDLLQAVYQDF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+ I++KLSTRPEKRVG+D LWD AE             +   +   +  GEGAFYGPK
Sbjct: 411 GFDNILIKLSTRPEKRVGADELWDQAEAA------LAAALAAKGLAYELQPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD +GR WQCGT+Q+DFNLP R  A YV+  + K HPVM+HRA+ GS+ERFIGI+
Sbjct: 465 IEFSLKDCLGRVWQCGTLQLDFNLPVRLGAEYVSEDNAKKHPVMLHRAILGSLERFIGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+  G +PLWL+P+Q  V  IT +  EYA E+A  LK     ++ D RNE I+YKIREH
Sbjct: 525 IEHHAGAMPLWLAPVQMAVLNITEAQAEYATEVAETLKKQGFRVDLDLRNEKISYKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           S++K+P  II GDKE +   + +R        ++ L   I  L  E L
Sbjct: 585 SLQKLPYQIIVGDKEKAGALVAVRARTGEDLGQIPLSQFIERLKSELL 632


>gi|157964288|ref|YP_001499112.1| threonyl-tRNA synthetase [Rickettsia massiliae MTU5]
 gi|157844064|gb|ABV84565.1| Threonyl-tRNA synthetase [Rickettsia massiliae MTU5]
          Length = 651

 Score =  665 bits (1716), Expect = 0.0,   Method: Composition-based stats.
 Identities = 326/644 (50%), Positives = 441/644 (68%), Gaps = 15/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            I ++FPDGSIK F  + T  +VA +IS SLAK A+   ING++ DLS  +  +  + I+
Sbjct: 17  MINISFPDGSIKQFAKNITAYEVANAISMSLAKAAIVAEINGELQDLSIVIENDCKLRIL 76

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +DP  L +IRH  AH+ AEAV+ ++PE QV IGP IE+G+YYDF +++P+++D+LA I
Sbjct: 77  TAKDPECLEIIRHDAAHLTAEAVKELFPETQVTIGPAIENGYYYDFARDKPWTTDDLAVI 136

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E KMQE+  ++    ++    +KA E F+S  E YK EI+ SIPA E +TLYRQG + DL
Sbjct: 137 EAKMQELSQKNEKVTRELWDRDKAVEFFKSIGEHYKAEIIASIPAGEPITLYRQGNFIDL 196

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH  STG VK F KLMKVAGAYWRGDS   ML RIYGTAW T+++L  YL  LEE+E
Sbjct: 197 CRGPHAPSTGVVKHF-KLMKVAGAYWRGDSRNEMLQRIYGTAWATKEQLDSYLLMLEEAE 255

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD 301
           KRDHRKL RE+DLFH  E+  G++FWH KGW I+ T+  Y+R+KI+ + Y E+ TP ++D
Sbjct: 256 KRDHRKLGRELDLFHFQEEAQGMVFWHDKGWSIYNTIEQYIRKKIRKNGYTEVKTPVLVD 315

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW  +R +MF ++  D T       ALKPMNCP HV +F  G+KSYR+LP+R
Sbjct: 316 KSLWEVSGHWAKFRDDMFVLETDDKT------LALKPMNCPCHVQIFKQGIKSYRDLPLR 369

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           ++EFG  +RNE SG+LHGLMRVR   QDDAH+FC +EQ+ +E +    L+  +YKDFGF 
Sbjct: 370 MSEFGLCHRNEASGALHGLMRVRSLVQDDAHIFCAEEQITDETVSFCKLLTEVYKDFGFT 429

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            I VK S RPE R GSD +WD AEN +K  ++      Q      +  GEGAFYGPK E+
Sbjct: 430 DIKVKFSDRPEVRAGSDEVWDKAENALKEAVE------QAGFTYTLNPGEGAFYGPKLEF 483

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
           +L DAIGR WQCGT+Q+DF LP R +A YV +  EK  PVM+HRA+ GS+ERFIGI+IE 
Sbjct: 484 VLTDAIGRQWQCGTLQMDFVLPERLDASYVAASGEKKRPVMLHRAILGSLERFIGILIEE 543

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  PLWL+P+Q  + TITS   +YA E+   L  + +  + +   + INYKIRE S +
Sbjct: 544 YAGRFPLWLAPVQVAIATITSDLNDYALEVQKALIDNGVRTDFNISPDKINYKIREFSNQ 603

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           KIP+I + G +E   + + IRR G+T  + +S+   I ++ +E+
Sbjct: 604 KIPMIAVIGKQEQENKQVAIRRLGTTDQEVLSVEQLIAVVKEEN 647


>gi|226944147|ref|YP_002799220.1| threonyl-tRNA synthetase [Azotobacter vinelandii DJ]
 gi|259516344|sp|C1DF42|SYT_AZOVD RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|226719074|gb|ACO78245.1| threonyl-tRNA synthetase [Azotobacter vinelandii DJ]
          Length = 640

 Score =  665 bits (1716), Expect = 0.0,   Method: Composition-based stats.
 Identities = 295/639 (46%), Positives = 426/639 (66%), Gaps = 15/639 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS + F    + ++VA+SI   LAK  VA  ++GK+ D  D +  + +++IITP+
Sbjct: 4   ITLPDGSQRTFDHPVSVAEVAQSIGAGLAKATVAGKVDGKLVDACDLIDHDATLQIITPK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   + +IRHSCAH++  AV+ ++P  ++ IGP+I++GFYYD   E+PF+ +++A IE++
Sbjct: 64  DEEGVEIIRHSCAHLVGHAVKQLYPTAKMVIGPVIDEGFYYDIAYERPFTPEDVAAIEQR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+E+I RD   +K+    E+  E+F+S+ E YK+ +++ +P ++ + LY   E+ D+CRG
Sbjct: 124 MRELIDRDYDVVKKMTPREQVIEVFKSRGEDYKLRLIDDMPDEKAMGLYYHEEYVDMCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +T  +K F KL K++GAYWRGD+    L R+YGTAW  +++L  Y+  +EE+EKRD
Sbjct: 184 PHVPNTRFLKAF-KLTKLSGAYWRGDAKNEQLQRVYGTAWADKKQLAAYIQRIEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHL 304
           HRKL + +DLFH  E+  G++FWH  GW ++Q L  YMR  + ++ Y EI TPQV+D+ L
Sbjct: 243 HRKLGKRLDLFHTQEEAPGMVFWHPNGWTVYQVLEQYMRAVQRENGYLEIKTPQVVDRVL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHW +Y  NMF       T  + R +A+KPMNCP HV V+N GLKSYRELP+RLAE
Sbjct: 303 WEKSGHWANYAENMFT------TESESRDYAIKPMNCPCHVQVYNQGLKSYRELPLRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FG+ +RNEPSG+LHG+MRVRGFTQDDAH+FCT+EQM  E      L   +Y DFGF+ I 
Sbjct: 357 FGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEEQMQAESAAFIKLTRQVYADFGFQDIQ 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +KLSTRPE+RVGS  LWD      +             +   +  GEGAFYGPK E+ LK
Sbjct: 417 LKLSTRPERRVGSGELWD------RAEEALAAALESAGLPYELQPGEGAFYGPKIEFSLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D +GR WQCGT+Q+DFNLP R  A YV+ ++E+ HPVM+HRA+ GS ERFIGI+IE+++G
Sbjct: 471 DCLGRVWQCGTLQLDFNLPVRLGAEYVSENNERQHPVMLHRAILGSFERFIGILIEHYEG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P WL+P QA++  IT    E+A E+   L       + D RNE I +KIREH++ K+P
Sbjct: 531 AFPAWLAPTQAVIMNITDKQGEFALEVERTLNQGGFRAKCDLRNEKIGFKIREHTLLKVP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +++ GD+E    S+ +R         + +     +L +
Sbjct: 591 YLLVIGDREVETHSVAVRTREGVDLGTMPVEQFREMLAQ 629


>gi|118580723|ref|YP_901973.1| threonyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
 gi|166225474|sp|A1ARE5|SYT_PELPD RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|118503433|gb|ABK99915.1| Ser-tRNA(Thr) hydrolase [Pelobacter propionicus DSM 2379]
          Length = 636

 Score =  665 bits (1715), Expect = 0.0,   Method: Composition-based stats.
 Identities = 283/648 (43%), Positives = 419/648 (64%), Gaps = 19/648 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
           M S I +  PDGS +     +T +D+A SI   LAK A+A  ++G++ DLS  +++ S +
Sbjct: 1   MSS-ISIALPDGSKREIASGSTIADLAASIGAGLAKAAIAGKLDGELVDLSTELKDDSRV 59

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT + P +L VIRHS AH+MA+AV+ ++P+ +V IGP IE GFYYDFD + PF+ ++L
Sbjct: 60  EIITEKSPEALTVIRHSAAHLMAQAVKELFPQAKVTIGPAIESGFYYDFDMDAPFTPEDL 119

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IE +M E+ A +    ++ LS  +A  LF    E YKVE++  + A E V++Y QG++
Sbjct: 120 ERIEARMAELAAANQKIERRVLSSSEAVSLFSGMGENYKVELINDLAA-ETVSVYSQGDF 178

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPH+ ST ++K F KL+ +AGAYWRGD    ML RIYGTA+  ++EL  YL+ LE
Sbjct: 179 ADLCRGPHLPSTSRIKAF-KLLSIAGAYWRGDEKNRMLQRIYGTAFADKKELEAYLHRLE 237

Query: 240 ESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTP 297
           ES++RDHR+L RE+DLF  +++   G++ WH KG  +   L  + RR+ +K  Y+ +  P
Sbjct: 238 ESKRRDHRRLGRELDLFSFSDEVGAGLVIWHPKGAMLRTILEDFERREHLKRGYDIVLGP 297

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           Q+L + LWQ+SGH+++YR NM+  +       D +++ +KPMNC  H+ ++   L+SYR+
Sbjct: 298 QILKKELWQRSGHYENYRENMYFTEV------DEQSYGIKPMNCLAHMMIYKSHLRSYRD 351

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R  E G+V+R+E +G LHGL+RVRGFTQDDAH+ C  EQ+  E   +   +  +   
Sbjct: 352 LPLRYFELGTVHRHERAGVLHGLLRVRGFTQDDAHILCAPEQLDGEIKGVLKFVSDVMAI 411

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFE  M +LSTRPEK +G DA W+ A   +   L     S        +  G+GAFYGP
Sbjct: 412 FGFEYEM-ELSTRPEKSIGDDAAWELATEALLSALKDTGRS------FEINEGDGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  LKDA+ R WQC TIQ DF LP RF+  YV +  EK  PVM+HR V G+IERFIG+
Sbjct: 465 KIDIKLKDALDRRWQCATIQCDFTLPERFDLQYVAADGEKKRPVMVHRVVLGAIERFIGV 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE++ GN PLWLSP+QA++ T+T + + YAQ +   L+   + ++ DFRNE +++KIRE
Sbjct: 525 LIEHYAGNFPLWLSPVQAMLVTVTDNHIPYAQGVLEHLREAGIRVQGDFRNEKLSFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
             ++K+P +++ GDKE    ++  R         +   D +  + +E+
Sbjct: 585 AQLQKVPYMLVIGDKEMESATVTPRFRDGKNLVAMKPEDFVAFVVEET 632


>gi|229085293|ref|ZP_04217535.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-44]
 gi|228698012|gb|EEL50755.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-44]
          Length = 642

 Score =  665 bits (1715), Expect = 0.0,   Method: Composition-based stats.
 Identities = 286/644 (44%), Positives = 425/644 (65%), Gaps = 17/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            I++ FPDGSIK F    T  ++A SIS SL KKAVA  +NG+V DL   +     ++II
Sbjct: 5   MIEIIFPDGSIKEFVKGITLEEIAGSISTSLKKKAVAGKVNGQVFDLRRNIEGNAKVQII 64

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +    + + RH+ AHI+A+AV+ I+ +V+  IGP+IE+GFYYD D     + ++L +I
Sbjct: 65  TMDSAEGVEIARHTSAHILAQAVKRIYGDVKFGIGPVIENGFYYDMDLPNSIAVEDLPKI 124

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
             +MQ I+  +    +  ++ ++A ELF+   +  K+E+LE+IP  E VT+Y+QGE+ DL
Sbjct: 125 GNEMQNIVNENLKIERVEITRKEAEELFQDVNDHLKLELLEAIPEGEVVTIYKQGEFVDL 184

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ STG +K F     V+GAYWRGDSN  +L RIYG A+++Q+EL  YL F+EE+ 
Sbjct: 185 CRGPHLPSTGYLKAFRLTH-VSGAYWRGDSNNQVLQRIYGVAFSSQKELESYLQFVEEAA 243

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KR+HRKL  E++LF  +E+  G+ F+  KG  I   L S++R  + K DY+E+ TP +++
Sbjct: 244 KRNHRKLGNELELFMFSEEAPGMPFYLPKGQIIRNELESFLREIQQKYDYQEVRTPIMMN 303

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           Q LW++SGHWD Y+ NM+  +       D ++FALKPMNCPGH+ +F H L+SYR+LP+R
Sbjct: 304 QGLWEESGHWDHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKHKLRSYRDLPIR 357

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           + EFG V+R+E SG+L+GL+RVR F QDDAH+F T EQ+ +E   +   I  +Y+ FGFE
Sbjct: 358 MCEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPEQIESEIKSVLQQIDYVYRTFGFE 417

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPE  +G   LW+ AE+ ++ VL+++           V  G+GAFYGPK ++
Sbjct: 418 Y-EVELSTRPEDSMGDVELWNQAESALENVLESLNY------KYRVNEGDGAFYGPKIDF 470

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+ R  QCGT+Q+DF +P +F+  Y++  +EK  PV+IHRAV GS +RF+GI+IE+
Sbjct: 471 HIKDALKRSHQCGTVQLDFQMPEKFDLNYIDERNEKRRPVVIHRAVLGSFDRFLGILIEH 530

Query: 542 FKGNLPLWLSPIQAIVTTITS-SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           F G  P WL+ +Q  +  +++    EY +EI   L+S  L +E D R E + YKIRE  I
Sbjct: 531 FGGAFPAWLASVQVKIIPVSNLVHEEYTKEIEEKLQSVGLRVERDVRGEKLGYKIREAQI 590

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +K+P +++ GDKE    ++ +R++G   ++ VSL   I  L  E
Sbjct: 591 QKVPYVLVIGDKEMENGAVNVRKYGEEKSEVVSLATFIESLQVE 634


>gi|23016433|ref|ZP_00056189.1| COG0441: Threonyl-tRNA synthetase [Magnetospirillum magnetotacticum
           MS-1]
          Length = 621

 Score =  665 bits (1715), Expect = 0.0,   Method: Composition-based stats.
 Identities = 319/630 (50%), Positives = 438/630 (69%), Gaps = 14/630 (2%)

Query: 22  TGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPED-PRSLAVIRHSCAH 79
           TG DVA+ I   LAK A+A+ I+G++ DL+  +  + ++ IIT +    +L ++RH  AH
Sbjct: 2   TGLDVAKDIGPGLAKAALAITIDGEMKDLATLITRDVNLSIITAKSGADALELLRHDAAH 61

Query: 80  IMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQ 139
           +MAEAV+ ++PE QV IGP IE+GFYYDF +  PF+ D+L +IEK+M EI+ RD    ++
Sbjct: 62  VMAEAVKELYPETQVTIGPSIENGFYYDFARPTPFTPDDLEKIEKRMAEIVDRDEAITRE 121

Query: 140 YLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFK 199
               + A + F    E YK EI+ SIPA + + LYRQG + DLCRGPH+ ST ++ K FK
Sbjct: 122 EWDRDTAVQFFLDAGETYKAEIIASIPADQKIGLYRQGNFIDLCRGPHLPSTAKLGKAFK 181

Query: 200 LMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIA 259
           LMK+AGAYWRGDS   ML RIYGTAW  ++EL  YL+ LEE+EKRDHR+L REM+LFH  
Sbjct: 182 LMKLAGAYWRGDSRNEMLQRIYGTAWFDKKELDAYLHMLEEAEKRDHRRLGREMELFHQQ 241

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANM 318
           E+ +G +FWH+KGW +++ + SYMRR+++ +DY+E+ TPQ++D  LW+ SGH D +  +M
Sbjct: 242 EEAAGSVFWHKKGWTLYRAVESYMRRRLEANDYQEVKTPQLVDFSLWEASGHADKFSESM 301

Query: 319 FAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLH 378
           F ++  D+     R  A+KPMNCP HV +F  G+KSYR+LP+R+AEFGS +R EPSG+LH
Sbjct: 302 FTIRTQDE-----RHLAVKPMNCPCHVQIFRQGIKSYRDLPLRMAEFGSCHRYEPSGALH 356

Query: 379 GLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD 438
           G+MRVR FTQDDAH+FCT++Q+ +E +    L+  +Y DFGF  + VK S RP KR GSD
Sbjct: 357 GIMRVRAFTQDDAHIFCTEDQITSETIAFCQLLKEVYTDFGFTDVRVKFSDRPAKRAGSD 416

Query: 439 ALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
             WD AE+ +              + T +  GEGAFYGPK E++L+DAIGRDWQCGT+QV
Sbjct: 417 ETWDKAESALLEASKAAG------LETVLNPGEGAFYGPKLEFVLRDAIGRDWQCGTLQV 470

Query: 499 DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVT 558
           DF LP R +A YV     K  PVM+HRA+ GS ERF+GI+IENF G  P+WL+P+Q +V 
Sbjct: 471 DFVLPERLDAAYVAEDGAKKRPVMLHRAILGSFERFLGILIENFAGRFPVWLAPVQVVVA 530

Query: 559 TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERS 618
           TI S A  +A E+A  LK+  + +E D RNE INYK+REHS+ K+P++++ G +EA  R 
Sbjct: 531 TIVSEADVFATEVAATLKAAGIRVELDLRNEKINYKVREHSVAKVPVMLVVGKREAESRQ 590

Query: 619 IGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
           + IRR GS   + V+L  A+  L  E+ PP
Sbjct: 591 VAIRRLGSQNQEIVALDQAVATLAAEATPP 620


>gi|228958638|ref|ZP_04120356.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228801059|gb|EEM47958.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
          Length = 640

 Score =  665 bits (1715), Expect = 0.0,   Method: Composition-based stats.
 Identities = 275/646 (42%), Positives = 429/646 (66%), Gaps = 17/646 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEII 62
            I++ FPDGS+K F    T  ++A  IS SL KKAVA  +N  + DL   + E   +EII
Sbjct: 5   MIEIKFPDGSVKEFVNGVTLEEIAGFISSSLKKKAVAGKVNDGLYDLRRKIEENAEVEII 64

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +    + + RHS AHI+A+AV+ ++ ++ + +GP+IE+GFYYD D     + ++L +I
Sbjct: 65  TIDSNEGVEIARHSAAHILAQAVKRLYSDINLGVGPVIENGFYYDMDLPSSVNVEDLRKI 124

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M++II  +    +  +S E+A +LF+   +  K+E+LE+IP+ E+VTLY+QGE+ DL
Sbjct: 125 EKEMKKIINENIKIERVEVSREEAAKLFQEMNDRLKLELLEAIPSGESVTLYKQGEFVDL 184

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+  TG +K F     V+GAYWRGDSN  +L RIYG A+++Q+EL +YL+F+EE+ 
Sbjct: 185 CRGPHLPFTGYLKAFQLTH-VSGAYWRGDSNNQVLQRIYGVAFSSQKELEEYLHFVEEAA 243

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KR+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R  + + +Y+E+ TP +++
Sbjct: 244 KRNHRKLGSELELFMFSEEAPGMPFYLPKGQMIRNELEAFLREIQKEYNYQEVRTPFMMN 303

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           Q +W++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R
Sbjct: 304 QEVWERSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIR 357

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           + EFG V+R+E SG+L+GL+RVR F QDDAH+F T +Q+ +E   +   I  +YK FGFE
Sbjct: 358 MCEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPKQIEDEIKSVMAQIDYVYKTFGFE 417

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPE  +G D LW+ AE  ++ VL ++           +  G+GAFYGPK ++
Sbjct: 418 Y-EVELSTRPEDSMGDDKLWEQAEAALENVLQSLNY------KYRLNEGDGAFYGPKIDF 470

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+ R  QCGTIQ+DF +P +F+  Y++ ++EK  PV+IHRAV GS++RF+ I+IE+
Sbjct: 471 HIKDALNRSHQCGTIQLDFQMPEKFDLNYIDENNEKKRPVVIHRAVLGSLDRFLAILIEH 530

Query: 542 FKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           F G  P W++P+Q  V  ++++   +YA EIA  L    + +E D R+E + YKIRE  +
Sbjct: 531 FGGAFPAWVAPVQVKVIPVSNAVHEQYANEIALKLAQAGVRVEQDARDEKLGYKIREAQM 590

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           +K+P +++ GDKE    ++ +R++G   ++  +L   +  + +E  
Sbjct: 591 QKVPYVLVIGDKEMENGAVNVRKYGEEKSEVTALDIFVATIEEEIT 636


>gi|167769368|ref|ZP_02441421.1| hypothetical protein ANACOL_00694 [Anaerotruncus colihominis DSM
           17241]
 gi|167668336|gb|EDS12466.1| hypothetical protein ANACOL_00694 [Anaerotruncus colihominis DSM
           17241]
          Length = 635

 Score =  665 bits (1715), Expect = 0.0,   Method: Composition-based stats.
 Identities = 278/644 (43%), Positives = 403/644 (62%), Gaps = 19/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            I +T  DG +K +    T ++VA+S+   L K A A  ++GK  DL  P+  + ++ I+
Sbjct: 2   MINVTLKDGVVKQYEQGTTAAEVAKSLGAGLYKAACAAKVDGKAVDLRTPLESDCTLSIL 61

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T + P       H+ +H++A+AV  ++P+ +  IGP +E+GFYYDFD E+PF+ ++LA I
Sbjct: 62  TFDAPEGKHAFWHTASHVLAQAVMRLYPDTKYTIGPAVENGFYYDFDVEKPFTPEDLAAI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPA-KENVTLYRQGEWFD 181
           EK+M  I+       +  L   +AREL +   + YK+E+++   A  E V+ YRQ ++ D
Sbjct: 122 EKEMAAIVKSGVELDRFELDAPQARELMK--DQPYKLELIDKHAASGEKVSFYRQNDFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LC GPH+ +   +K   KL++  GAYW GDS+  ML R+YG A+    EL+ YL+ LEE+
Sbjct: 180 LCAGPHLMNVAPLK-AIKLLQSTGAYWHGDSSNKMLCRVYGIAFPKASELSDYLHMLEEA 238

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVL 300
           ++RDHRKL RE+DLF I E+G G  F+  KG  +   L S+ R + +   Y+EI TP +L
Sbjct: 239 KRRDHRKLGRELDLFDIYEEGPGFPFFFPKGMILRNLLESFWREEHQKHGYQEIRTPLIL 298

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ LW +SGHWD Y+ NM+  K       D R +A+KPMNCPG + V+   + SYR+LP 
Sbjct: 299 NEELWHRSGHWDHYKDNMYTTKI------DDRDYAIKPMNCPGGILVYKRRMNSYRDLPQ 352

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLAE G V+R+E SG+LHGLMRVR FTQDDAH+F T +Q+  E L + NLI SIY+ FGF
Sbjct: 353 RLAELGIVHRHELSGALHGLMRVRCFTQDDAHIFMTPDQIEAEVLGVINLIDSIYRVFGF 412

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           +  + +LSTRPE  +GS+  W+ A   ++  L+             V  G+GAFYGPK +
Sbjct: 413 DYFL-ELSTRPEDSMGSEEQWETATAALRKALEDNGRP------YTVNEGDGAFYGPKID 465

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           + L+D+IGR WQCGTIQ+DF +P RF+  Y+ S  E+  PVM+HR  FGSIERFIGI+IE
Sbjct: 466 FHLRDSIGRTWQCGTIQLDFQMPERFDLAYIGSDGERHRPVMVHRTAFGSIERFIGILIE 525

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           ++ G  PLWL+P+Q  V  +T   + YAQ +A+ L    L IE D RNE + Y+IRE  +
Sbjct: 526 HYAGAFPLWLAPVQIKVLPVTDEHIPYAQSVADTLTRAGLRIELDSRNEKVGYRIREAQL 585

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +KIP +++ G KEA    + +R      T  + L D +  +  E
Sbjct: 586 QKIPYMLVLGGKEAESGEVAVRDRRDGKTTTMLLADFVEKMKTE 629


>gi|161831126|ref|YP_001597175.1| threonyl-tRNA synthetase [Coxiella burnetii RSA 331]
 gi|161762993|gb|ABX78635.1| threonyl-tRNA synthetase [Coxiella burnetii RSA 331]
          Length = 660

 Score =  665 bits (1715), Expect = 0.0,   Method: Composition-based stats.
 Identities = 298/646 (46%), Positives = 429/646 (66%), Gaps = 18/646 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP    +  PDGS+K F    +   VAESI  SLAK A+A  I+  + D+S  + ++ S+
Sbjct: 10  MP---TIQLPDGSVKQFSKPVSVQAVAESIGTSLAKPALAGKIDDHLVDVSFIIDKDVSL 66

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +DP  L VIRHS AH++A AV+ ++P+ +V IGP++EDGFYYDF  E+ F+ ++L
Sbjct: 67  RIITEKDPEGLEVIRHSAAHLLAHAVKELFPKAEVTIGPVVEDGFYYDFAFERSFTPEDL 126

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IE+KM+ +   D    ++ LS ++A  LF+   E YKVEI+  IP +E +T Y+QG++
Sbjct: 127 EKIEEKMRSLAKADLAVERRVLSRDEALTLFKKMGERYKVEIIRDIPKEEILTAYQQGDF 186

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV  TG +K F KL K+AGAYWRGDSN  ML RIYGTAW   + L  YLY LE
Sbjct: 187 IDLCRGPHVPRTGMLKAF-KLTKLAGAYWRGDSNNEMLQRIYGTAWADTKALKAYLYRLE 245

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQ 298
           E+EKRDHR LA++MDLFH   +  G +FWH  GW I   +  Y+R+   K  Y+E++TPQ
Sbjct: 246 EAEKRDHRLLAKKMDLFHFQPESPGNVFWHPNGWSIILQMREYIRQITHKYGYQEVHTPQ 305

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D  LW +SGH + +  ++F++        + + + +KPM+CP HV +FN G+KSYR+L
Sbjct: 306 LIDASLWDKSGHLEKFGDDIFSL------PLEPQQYVIKPMSCPAHVQIFNQGVKSYRDL 359

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R AEFG+ +RNEPSG+LHGLMR+RGF QDDAH+FCT++Q+ +E     + +  +Y DF
Sbjct: 360 PLRYAEFGACHRNEPSGTLHGLMRLRGFVQDDAHIFCTEDQIQSEVSAFIDQLHEVYADF 419

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF +++ KLSTRPEKRVGSD +W  AE  +   L+      +  +   +L GEGAFYGPK
Sbjct: 420 GFTEVIHKLSTRPEKRVGSDEVWTKAEQALAEALN------RKGVEWDILPGEGAFYGPK 473

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ L+D +GR WQCGT+QVDF++P R  A Y+     K  PVMIHRA+ GS ERF+GI+
Sbjct: 474 IEFSLRDCLGRIWQCGTVQVDFSVPERLGAHYIAEDGSKKPPVMIHRAILGSFERFLGIL 533

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           +E   G LPLWL+P+Q +V  IT    +Y  +    L++  +   +D RNE I +KIREH
Sbjct: 534 LEESAGKLPLWLAPVQVVVMNITDRQADYVGQTVENLQNLGIRAHSDLRNEKIGFKIREH 593

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +I ++P +++ GD+E +++++ +R      +  ++L +    L  E
Sbjct: 594 TIARVPYLVVIGDREVADKTLSVRALEDEASTTITLEEFARQLKAE 639


>gi|85059397|ref|YP_455099.1| threonyl-tRNA synthetase [Sodalis glossinidius str. 'morsitans']
 gi|123738953|sp|Q2NT31|SYT_SODGM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|84779917|dbj|BAE74694.1| threonyl-tRNA synthase [Sodalis glossinidius str. 'morsitans']
          Length = 642

 Score =  665 bits (1715), Expect = 0.0,   Method: Composition-based stats.
 Identities = 293/647 (45%), Positives = 421/647 (65%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS + F    +  DVA  I   LAK  +A  +NGK+ D  D +  +  I
Sbjct: 1   MPV---ITLPDGSQRQFAHPVSPLDVARDIGPGLAKACIAGRVNGKLVDAVDVIEHDAQI 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L +IRHSCAH++  A++ +WP+ ++AIGP+I+ GFYYD D +   + D+L
Sbjct: 58  AIITAKDEAGLEIIRHSCAHLLGHAIKQLWPQTKMAIGPVIDKGFYYDLDLDHTLTQDDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M E+  +D   +K+ +S ++AR+ F ++ E YKV IL E+I   +   LY   E
Sbjct: 118 DLLEKRMHELAEKDYDVIKEKVSWQQARDAFVARGEDYKVAILDENIRRDDRPGLYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F    K +GAYWRGDS   ML RIYGTAW  +++L  YL  L
Sbjct: 178 YVDMCRGPHVPNMRFCHHFTLQ-KTSGAYWRGDSKNKMLLRIYGTAWGDKKQLNTYLQHL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW +F+ L +++R K+K   Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTLFRELETFVRMKLKAYQYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW+++GHWD+Y  +MF       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 297 FMMDRVLWEKTGHWDNYAEHMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+ +E      ++  +Y  
Sbjct: 351 LPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQVRDEVNNCIKMVYDMYGT 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI+VKLSTRPEKR+GS+ +W  AE  +   L      +++ I      GEGAFYGP
Sbjct: 411 FGFEKILVKLSTRPEKRIGSNDVWGRAEQDLAAAL------TENGIAFEYQPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF+LP R NA YV  ++E+  PVMIHRA+ GS+ERFIGI
Sbjct: 465 KIEFTLLDCLDRAWQCGTVQLDFSLPGRLNASYVGENNERVVPVMIHRAILGSMERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E + G  P WL P Q +V  IT +  EY  ++   L +  + ++ D RNE I +KIRE
Sbjct: 525 LTEEYAGFYPTWLVPTQVVVMNITDNQSEYVAKLTEKLSAAGIRVKADLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H+++++P +++CGDKE     + +R         + + + I  L  E
Sbjct: 585 HTLRRVPYMLVCGDKEVEACKVAVRTRRGKDLGSIDVNEIITKLQHE 631


>gi|40062682|gb|AAR37595.1| threonyl-tRNA synthetase [uncultured marine bacterium 314]
          Length = 638

 Score =  665 bits (1715), Expect = 0.0,   Method: Composition-based stats.
 Identities = 333/650 (51%), Positives = 463/650 (71%), Gaps = 16/650 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP    +  PDG    F     G ++A+ IS+SLAK A  +++NGK+ DLS  +  +  +
Sbjct: 1   MP---NIKLPDGKKIPFSKTIDGFEIAKKISKSLAKDACIMSVNGKLRDLSFSIDNDVQV 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           +IIT +D   L VIRH  AH++A AVQ ++P  QV IGP+I+DGFYYDF +++ F+ ++L
Sbjct: 58  KIITKKDKEGLEVIRHDAAHVLAMAVQELFPGTQVTIGPVIKDGFYYDFSRKETFTDEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IE KM+EI+ RD P  ++     +A   F+   E YK EI+E IP  E +++Y  G+W
Sbjct: 118 KKIENKMKEIVDRDEPTKREVWKRNEAINHFKKIGEHYKAEIIEDIPKNEELSIYHHGKW 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLC+GPH+ STG++ K FKL KV+GAYWRGDSN  ML RIYGT W+ ++EL +YL  LE
Sbjct: 178 HDLCKGPHLPSTGKIGKAFKLTKVSGAYWRGDSNNEMLQRIYGTCWSNKKELDEYLLRLE 237

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQ 298
           E EKRDHRKL +EMDLFH  E+  G +FWH KGW +FQTL+ YMR ++ K  Y+EINTP+
Sbjct: 238 EIEKRDHRKLGKEMDLFHFREESPGAVFWHHKGWTLFQTLVGYMRLKQKKAGYKEINTPE 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +LD++LW+QSGHW+ +  NMF  +       D +TFA+KPMNCPG + +FN GLKSYR+L
Sbjct: 298 ILDKNLWEQSGHWEKFGENMFTSETP-----DKKTFAIKPMNCPGCLQIFNQGLKSYRDL 352

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RL+EFG V+R EPSG+LHGL+RVR FTQDDAH+FCT++Q+ +ECL + NLI+ IYKD 
Sbjct: 353 PLRLSEFGKVHRYEPSGALHGLLRVRAFTQDDAHIFCTEDQITDECLSVTNLILEIYKDL 412

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+ ++++ S RP+KRVG D +WD AE+ +      +K   Q ++   +  GEGAFYGPK
Sbjct: 413 GFKNVLLQYSDRPQKRVGDDKIWDKAESAL------LKAIKQSKLKYEINKGEGAFYGPK 466

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +++L+D IGRDWQCGT+QVD NLPSR  A YV+S   K  PVM+HRA+FGS+ERFIGI+
Sbjct: 467 IDFVLRDTIGRDWQCGTLQVDLNLPSRLGASYVSSDGSKKVPVMLHRALFGSLERFIGIL 526

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE++ G LPLWL+PIQA+V  I S    YA++I        ++ E D +N+ INYKIREH
Sbjct: 527 IEHYAGKLPLWLAPIQAVVLPIASEFDNYAKKIFEQCMKAGINTEVDLKNKKINYKIREH 586

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
           S+ K+P+++ICG+KE   +S+ IR+ GS   + +SL  AI  ++++++ P
Sbjct: 587 SLSKVPLLLICGEKEVKGKSVTIRKLGSEKQETLSLDRAIKKISQQNMFP 636


>gi|253700848|ref|YP_003022037.1| threonyl-tRNA synthetase [Geobacter sp. M21]
 gi|259516486|sp|C6DYJ5|SYT_GEOSM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|251775698|gb|ACT18279.1| threonyl-tRNA synthetase [Geobacter sp. M21]
          Length = 636

 Score =  664 bits (1714), Expect = 0.0,   Method: Composition-based stats.
 Identities = 278/645 (43%), Positives = 413/645 (64%), Gaps = 18/645 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEI 61
           ++I +T PDGS +  P  A+  D+A SI   LAK A+A  I+G + DL+ P+ +G+ +EI
Sbjct: 2   NEINVTLPDGSQRPLPAGASIFDLAASIGAGLAKAAIAGKIDGNLVDLNTPLADGARVEI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +T + P +L +IRHS +H+MA+AV++++P+ +V IGP IE GFYYDFD + PF+ ++L +
Sbjct: 62  VTEKSPEALEIIRHSTSHLMAQAVKALFPQAKVTIGPAIETGFYYDFDVDHPFTPEDLEK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE+KM+E+   D    ++ L+   A  LF+   E YKVE++E + A   V+LY QG++ D
Sbjct: 122 IEEKMRELAKADLKIERRELTSADAIALFKGMGEDYKVELIEDLGAD-KVSLYSQGDFVD 180

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+  T  +K F KL  +AGAYWRGD  R ML R+YGTA+  ++EL  YL  +EE+
Sbjct: 181 LCRGPHLPKTSYIKAF-KLTSIAGAYWRGDEKRAMLQRVYGTAFGDKKELEAYLARIEEA 239

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQV 299
           +KRDHRKL RE+DLF   ++   G++ WH KG  +   L  + R   +K  Y+ +  PQ+
Sbjct: 240 KKRDHRKLGRELDLFSFNDEVGAGLVIWHPKGAMLRTILEDFERKEHLKRGYDIVLGPQI 299

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           L   LWQ+SGH+++YR NM+       T  D +++ +KPMNC  H+ ++   L+SYR+LP
Sbjct: 300 LKTELWQRSGHYENYRENMYF------TTVDEQSYGVKPMNCLAHMMIYRSQLRSYRDLP 353

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R  E G+V+R+E +G LHGL+RVRGFTQDDAH+ CT +Q+  E   +   +  +   FG
Sbjct: 354 LRYFELGTVHRHERAGVLHGLLRVRGFTQDDAHILCTPDQLDAEIKGVIQFVTEVMGIFG 413

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           FE  M +LSTRPEK +GSD  W+ A + +   L              +  G+GAFYGPK 
Sbjct: 414 FEFEM-ELSTRPEKSIGSDDAWELATSALLNALKDSGRP------YEINEGDGAFYGPKI 466

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +  L+DA+ R WQC TIQ DF LP RF+  YV++  EK  PVM+HR + G+IERFIG++I
Sbjct: 467 DIKLRDALDRRWQCATIQCDFTLPERFDLTYVDADGEKKRPVMVHRVILGAIERFIGVLI 526

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E+F GN P WL+P+QA + T+T + + YAQ   + L++  + ++ DFRNE + +KIRE  
Sbjct: 527 EHFAGNFPTWLAPVQATIVTVTDNQIPYAQAAFDKLRAAGIRVQKDFRNEKLGFKIREAQ 586

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           ++KIP +++ GDKE     +  R       + ++    I  +  E
Sbjct: 587 LQKIPYMLVVGDKEVESGMLAPRFRDGKNLESMTPEQFITFIENE 631


>gi|315303326|ref|ZP_07873955.1| threonyl-tRNA synthetase [Listeria ivanovii FSL F6-596]
 gi|313628306|gb|EFR96810.1| threonyl-tRNA synthetase [Listeria ivanovii FSL F6-596]
          Length = 640

 Score =  664 bits (1714), Expect = 0.0,   Method: Composition-based stats.
 Identities = 262/648 (40%), Positives = 407/648 (62%), Gaps = 20/648 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K+TFPDG++K F    + +D+A SIS  L KKA+A  +NG++ DL  P+  +G+IEI+T
Sbjct: 1   MKITFPDGAVKEFESGVSTADIAASISPGLKKKALAGKLNGELLDLVTPIHEDGAIEIVT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+   +L ++RHS AH+MA+A++ ++P+V+  +GP I+ GFYYD D     S + L +IE
Sbjct: 61  PDHEDALGILRHSTAHLMAQALKRLYPDVKFGVGPAIDSGFYYDIDTVAVISDESLVEIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+MQ+I+  + P  ++ +S E+A + F++  + YK+E++E+IPA E VT+Y QGE+FDLC
Sbjct: 121 KEMQKIVRENVPIEREVVSREEAIKRFKAIGDEYKLELIEAIPADETVTIYTQGEFFDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RG HV STG+++ F KL+ VAGAYWRGDSN  ML RIYGTA+  +  L +++   +E+++
Sbjct: 181 RGVHVPSTGKIQVF-KLLSVAGAYWRGDSNNKMLQRIYGTAFFDKNGLKEFIQMQKEAKE 239

Query: 244 RDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           RDHRKL +E++LF  + +   G+  W  KG  I + +  Y+  K +   Y  + TP + +
Sbjct: 240 RDHRKLGKELELFTNSIEVGQGLPLWLPKGATIRRVIERYIVDKEERLGYNHVYTPIMAN 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             L++ SGHWD Y  +MF     D+         L+PMNCP H+ ++ + + SYRELP+R
Sbjct: 300 VELYKTSGHWDHYHEDMFPTMKMDN-----EELVLRPMNCPHHMMIYKNDIHSYRELPIR 354

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AE G ++R E SG+L GL RVRG T +DAHVF   +Q+ +E  ++  LI+ +YKDF   
Sbjct: 355 IAELGLMHRYEMSGALSGLQRVRGMTLNDAHVFVRPDQIKDEFKRVVELILEVYKDFDIT 414

Query: 422 KIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
               +LS R      K    DA+WD A+ ++K  +D +       ++     GE AFYGP
Sbjct: 415 DYSFRLSYRDPKNTEKYFDDDAMWDKAQTMLKSAMDEMG------MDYFEADGEAAFYGP 468

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  +K AIG++    T+Q+DF LP RF+  Y+    EK  PV+IHR V  ++ERF+  
Sbjct: 469 KLDVQVKTAIGKEETLSTVQLDFLLPERFDLTYIAEDGEKHRPVVIHRGVVSTMERFVAY 528

Query: 538 MIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +IE +KG  P WL+P+Q  +  +   + ++YA+ + + L+   L +E D RNE + YKIR
Sbjct: 529 LIEEYKGAFPTWLAPVQMELIPVNADAHLDYAKGVQDKLQRAGLRVEVDDRNEKLGYKIR 588

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           E   KKIP  ++ GD+E    ++ +RR+GS  ++ + L   I  +  E
Sbjct: 589 EAQTKKIPYALVLGDQEMESGTVNVRRYGSKDSETMDLDKFIAQVVAE 636


>gi|256422752|ref|YP_003123405.1| threonyl-tRNA synthetase [Chitinophaga pinensis DSM 2588]
 gi|256037660|gb|ACU61204.1| threonyl-tRNA synthetase [Chitinophaga pinensis DSM 2588]
          Length = 646

 Score =  664 bits (1714), Expect = 0.0,   Method: Composition-based stats.
 Identities = 264/649 (40%), Positives = 410/649 (63%), Gaps = 19/649 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            I +T PDG+++ +    T  DVA+SIS  LA+K +A   NG+V D S P+  +G+++++
Sbjct: 1   MINITLPDGAVRQYEAGVTAMDVAKSISEGLARKVLAAKFNGEVTDASRPITTDGTLQLL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
           T  D    + + HS AH+MAEA+++++P V++ IGP IE+GFYYD D   +  S ++L +
Sbjct: 61  TWNDTDGKSTMWHSSAHLMAEALEALYPGVKLGIGPAIENGFYYDIDLGGRSISEEDLQK 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           I  KM E+   +S + ++ +S   A + F  K + YK+E++  +    ++T Y QG + D
Sbjct: 121 IGDKMAELAKNNSVYERREVSKADAEKYFTEKNDEYKLELIRDLK-DGSITFYTQGNFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ +TG +K   KL  +AGAYWRG+    ML+RIYG  + TQ+EL +YL+ +EE+
Sbjct: 180 LCRGPHIPNTGFIK-AIKLTNIAGAYWRGNEKNKMLTRIYGITFPTQKELDEYLHLVEEA 238

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           +KRDHRKL +E++LF  +E    G+  W  KG  + + L S++++ +I+  Y  + TP +
Sbjct: 239 KKRDHRKLGKELELFTFSEKVGLGLPLWLPKGAMLRERLQSFLQKAQIESGYMPVVTPHI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +++L+  SGH++ Y  + F       T ++   F LKPMNCP H  ++    KSY++LP
Sbjct: 299 GNKNLYITSGHYEKYGKDSFQ---PIHTPEEGEEFMLKPMNCPHHCEIYKSSPKSYKDLP 355

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           VR AEFG+VYR E  G LHGL RVRGFTQDDAH+FC  +Q+  E  K+ +L++ +++   
Sbjct: 356 VRFAEFGTVYRYEQHGELHGLTRVRGFTQDDAHLFCRPDQVKEEFCKVIDLVLYVFQSLN 415

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           F     ++S R ++     +GSD  W+ AE  +      I+++++  + T V  GE AFY
Sbjct: 416 FTDYTAQISLRDQEDRAKYIGSDENWNLAEQAI------IESAAEKGLKTVVEYGEAAFY 469

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDA+GR WQ GTIQVD+NLP RF   YV + ++K  PVMIHRA FGS+ERFI
Sbjct: 470 GPKLDFMVKDALGRKWQLGTIQVDYNLPERFELEYVGADNQKHRPVMIHRAPFGSLERFI 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE+  G  PLWL+P Q  +  I+    EYA+++A LLK+  +  E D R+E I  KI
Sbjct: 530 AVLIEHCGGKFPLWLTPTQVKILPISDKNQEYAEKVAELLKNVEIRAEIDDRSEKIGKKI 589

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           RE  + KIP +++ G+KEA+E  + +RR        + +   I ++ +E
Sbjct: 590 RETELAKIPYMLVIGEKEAAESKVAVRRQAKGDLGAMDIDQFIALVKEE 638


>gi|229586468|ref|YP_002844969.1| threonyl-tRNA synthetase [Rickettsia africae ESF-5]
 gi|259516664|sp|C3PMR6|SYT_RICAE RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|228021518|gb|ACP53226.1| Threonyl-tRNA synthetase [Rickettsia africae ESF-5]
          Length = 635

 Score =  664 bits (1714), Expect = 0.0,   Method: Composition-based stats.
 Identities = 328/644 (50%), Positives = 443/644 (68%), Gaps = 15/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I ++FPDGSIK F  + T  +VA +IS SLAK A+   ING++ DLS  +  +  + I+
Sbjct: 1   MINISFPDGSIKQFAKNITAYEVANAISMSLAKAAMVAEINGELQDLSIVIDNDCKLRIL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +DP  L +IRH  AH+ AEAV+ ++PE QV IGP IE+G+YYDF +++PF++D+LA I
Sbjct: 61  TAKDPECLEIIRHDAAHLTAEAVKELFPETQVTIGPAIENGYYYDFARDKPFTTDDLAVI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E KMQE+  ++    ++    +KA E F+S  E YK EI+ SIPA E +TLYRQG + DL
Sbjct: 121 EAKMQELSQKNEQVTRELWDRDKAVEFFKSIGEHYKAEIIASIPAGEPITLYRQGNFIDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH  STG VK F KLMKVAGAYWRGDS   ML RIYGTAW T+++L  YL  LEE+E
Sbjct: 181 CRGPHAPSTGVVKHF-KLMKVAGAYWRGDSRNEMLQRIYGTAWATKEQLDSYLLMLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD 301
           KRDHRKL RE+DLFH  E+  G++FWH KGW I+ T+  Y+R+KI+ + Y E+ TP ++D
Sbjct: 240 KRDHRKLGRELDLFHFQEEAQGMVFWHDKGWSIYNTIEQYIRKKIRKNGYTEVKTPVLVD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW+ +R +MFA++  D T       ALKPMNCP HV +F  G+KSYR+LP+R
Sbjct: 300 KSLWEASGHWEKFRDDMFALETDDKT------LALKPMNCPCHVQIFKQGIKSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           ++EFG  +RNE SG+LHGLMRVR   QDDAH+FC  EQ+ +E +    L+  +YKDFGF 
Sbjct: 354 MSEFGLCHRNEASGALHGLMRVRSLVQDDAHIFCAAEQITDETVSFCKLLTEVYKDFGFT 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            I VK S RPE R GS+ +WD AEN +K  ++      Q   N  +  GEGAFYGPK E+
Sbjct: 414 DIKVKFSDRPEIRAGSNEVWDKAENALKEAVE------QAGFNYTLNPGEGAFYGPKLEF 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
           +L DAIGR WQCGT+Q+DF LP R +A YV +  EK  PVM+HRA+ GS+ERFIGI+IE 
Sbjct: 468 VLTDAIGRQWQCGTLQMDFVLPERLDASYVAASGEKKRPVMLHRAILGSLERFIGILIEE 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  PLWL+P+Q  + TITS   +YA E+   L  + +  + +   + INYKIRE S +
Sbjct: 528 YAGRFPLWLAPVQVAIATITSDLNDYALEVQKALIDNGIRTDFNISPDKINYKIREFSNQ 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           KIP+I + G +E   + + IRR G+T  + +S+   I ++ +E+
Sbjct: 588 KIPMIAVIGKQEQENKQVAIRRLGTTDQEVLSVEQLIAVVKEEN 631


>gi|229173066|ref|ZP_04300617.1| Threonyl-tRNA synthetase [Bacillus cereus MM3]
 gi|228610399|gb|EEK67670.1| Threonyl-tRNA synthetase [Bacillus cereus MM3]
          Length = 639

 Score =  664 bits (1714), Expect = 0.0,   Method: Composition-based stats.
 Identities = 280/644 (43%), Positives = 429/644 (66%), Gaps = 17/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEII 62
            I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N ++ DL   + E   +EI+
Sbjct: 5   MIEMKFPDGSVKEFVKGITLEEIAGSISSSLKKKAVAGKVNDQLYDLRRNIEENAEVEIV 64

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +    + + RHS AHI+A+AV+ +   V + +GP+IE+GFYYD D     + ++L +I
Sbjct: 65  TIDSNEGVEIARHSAAHILAQAVKRMHGNVNLGVGPVIENGFYYDMDLPSSVNVEDLPEI 124

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M++II  +    +  +S E+A++LF+   +  K+ +LE+IP+ E+VTLY+QGE+ DL
Sbjct: 125 EKEMKKIINENIKIERVEVSREEAKKLFQEMNDHLKLALLEAIPSGESVTLYKQGEFVDL 184

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ STG +K F     V+GAYWRGDSN  +L RIYG A+++Q+EL  YL+F+EE+ 
Sbjct: 185 CRGPHLPSTGYLKAFQLTH-VSGAYWRGDSNNQVLQRIYGVAFSSQKELEDYLHFVEEAA 243

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KR+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R  + +  Y+E+ TP +++
Sbjct: 244 KRNHRKLGSELELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYKYQEVRTPFMMN 303

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           Q LW++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R
Sbjct: 304 QELWEKSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIR 357

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           + EFG V+R+E SG+L+GL+RVR F QDDAH+F T EQ+ +E   +   I  +YK FGFE
Sbjct: 358 MCEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPEQIEDEIKSVMAQIDYVYKTFGFE 417

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPE  +G D LW+ AE  ++ VL ++           +  G+GAFYGPK ++
Sbjct: 418 Y-EVELSTRPEDSMGDDKLWEQAEEALENVLHSLNY------KYRLNEGDGAFYGPKIDF 470

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+ R  QCGTIQ+DF +P +F+  Y++  +EK  PV+IHRAV GS++RF+ I+IE+
Sbjct: 471 HIKDALNRSHQCGTIQLDFQMPEKFDLNYIDEKNEKRRPVVIHRAVLGSLDRFLAILIEH 530

Query: 542 FKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           F G  P W++P+Q  V  ++++  V+YA EIA+ L    + +E D R+E + YKIRE  +
Sbjct: 531 FGGAFPAWVAPVQVKVIPVSNAVHVQYADEIADKLAQAGIRVERDVRDEKLGYKIREAQM 590

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +K+P +++ GDKE    S+ +R++G   ++ + L   +  + +E
Sbjct: 591 QKVPYVLVIGDKEMENGSVNVRKYGEDQSEVIELNGFVESIKEE 634


>gi|165924098|ref|ZP_02219930.1| threonyl-tRNA synthetase [Coxiella burnetii RSA 334]
 gi|165916454|gb|EDR35058.1| threonyl-tRNA synthetase [Coxiella burnetii RSA 334]
          Length = 653

 Score =  664 bits (1714), Expect = 0.0,   Method: Composition-based stats.
 Identities = 297/646 (45%), Positives = 428/646 (66%), Gaps = 18/646 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP    +  PDGS+K F    +   VAESI  SLAK A+A  I+  + D+S  + ++ S+
Sbjct: 10  MP---TIQLPDGSVKQFSKPVSVQAVAESIGTSLAKAALAGKIDDHLVDVSFIIDKDVSL 66

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +DP  L VIRHS AH++A AV+ ++P+ +V IGP++EDGFYYDF  E+ F+ ++L
Sbjct: 67  RIITEKDPEGLEVIRHSAAHLLAHAVKELFPKAEVTIGPVVEDGFYYDFAFERSFTPEDL 126

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IE+KM+ +   D    ++ LS ++A  LF+   E YKVEI+  IP +E +T Y+QG++
Sbjct: 127 EKIEEKMRSLAKADLAVERRVLSRDEALTLFKKMGERYKVEIIRDIPKEEILTAYQQGDF 186

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV  TG +K F KL K+AGAYW+GDSN  ML RIYGTAW   + L  YLY LE
Sbjct: 187 IDLCRGPHVPRTGMLKAF-KLTKLAGAYWQGDSNNEMLQRIYGTAWADTKALKAYLYRLE 245

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQ 298
           E+EKRDHR LA++MDLFH   +  G +FWH  GW I   +  Y+R    K  Y+E++TPQ
Sbjct: 246 EAEKRDHRLLAKKMDLFHFQPESPGNVFWHPNGWSIILQMREYIRHITHKYGYQEVHTPQ 305

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D  LW +SGH + +  ++F++        + + + +KPM+CP HV +FN G+KSYR+L
Sbjct: 306 LIDASLWDKSGHLEKFGDDIFSL------PLEPQQYVIKPMSCPAHVQIFNQGVKSYRDL 359

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R AEFG+ +RNEPSG+LHGLMR+RGF QDDAH+FCT++Q+ +E     + +  +Y DF
Sbjct: 360 PLRYAEFGACHRNEPSGTLHGLMRLRGFVQDDAHIFCTEDQIQSEVSAFIDQLHEVYADF 419

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF +++ KLSTRPEKRVGSD +W  AE  +   L+      +  +   +L GEGAFYGPK
Sbjct: 420 GFTEVIHKLSTRPEKRVGSDEVWTKAEQALAEALN------RKGVEWDILPGEGAFYGPK 473

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ L+D +GR WQCGT+QVDF++P R  A Y+     K  PVMIHRA+ GS ERF+GI+
Sbjct: 474 IEFSLRDCLGRIWQCGTVQVDFSVPERLGAHYIAEDGSKKPPVMIHRAILGSFERFLGIL 533

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           +E   G LPLWL+P+Q +V  IT    +Y  +    L++  +   +D RNE I +KIREH
Sbjct: 534 LEESAGKLPLWLAPVQVVVMNITDRQADYVGQTVENLQNLGIRAHSDLRNEKIGFKIREH 593

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +I ++P +++ GD+E +++++ +R      +  ++L +    L  E
Sbjct: 594 TIARVPYLVVIGDREVADKTLSVRALEDEASTTITLEEFARQLKAE 639


>gi|329904275|ref|ZP_08273747.1| Threonyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480]
 gi|327548052|gb|EGF32784.1| Threonyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480]
          Length = 635

 Score =  664 bits (1714), Expect = 0.0,   Method: Composition-based stats.
 Identities = 316/643 (49%), Positives = 434/643 (67%), Gaps = 15/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +  PDGS + F    T + VA SI   LAK A+A  ++GKV D S  + R+  + II
Sbjct: 1   MVSVRLPDGSQRQFDQAVTVAQVAASIGAGLAKAALAGKVDGKVVDTSFLIDRDVDLAII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   + VIRHS AH++A AV+ ++P+ QV IGP IE+GFYYDF  ++PF+ D+L  I
Sbjct: 61  TDKDADGVDVIRHSTAHLLAYAVKELFPDAQVTIGPTIENGFYYDFSYKRPFTPDDLVTI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EKKM E+  RD P  +Q +S + A   F +  EAYK E++ +IPA + V+LY +G++ DL
Sbjct: 121 EKKMLELAKRDEPVTRQVMSRDDAIAYFLAIGEAYKAELIGAIPADQEVSLYTEGKFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG++K F KLMK+AGAYWRGDS   ML RIYGTAW  +++   YL+ LEE++
Sbjct: 181 CRGPHVPSTGKLKVF-KLMKLAGAYWRGDSKNEMLQRIYGTAWARKEDQEAYLHMLEEAD 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD 301
           KRDHRKL R +DLFH  E+  G+IFWH KGW ++Q +  YMRR  + + Y+E+  PQ+LD
Sbjct: 240 KRDHRKLGRLLDLFHFQEEAPGMIFWHPKGWSVWQQVEQYMRRVYQDNGYQEVKAPQILD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             LW++SGHW++Y+ NMF       T  + R++ALKPMNCPGHV +F   ++SYR+LP+R
Sbjct: 300 ISLWEKSGHWENYKENMFT------TESEKRSYALKPMNCPGHVQIFRSDMRSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
             EFG  +RNEPSGSLHG+MRVRGFTQDD H+FCT++Q+  EC+    L+  +Y DFGF 
Sbjct: 354 YGEFGQCHRNEPSGSLHGIMRVRGFTQDDGHIFCTEDQILEECVAYTALLHKVYADFGFA 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            I  K++TRPEKRVGS+  WD AEN +   L+             +  GEGAFYGPK EY
Sbjct: 414 NITYKVATRPEKRVGSEEAWDKAENALITSLERSGC------EFEISPGEGAFYGPKIEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L DAIGR WQCGT+QVDF++P R  A YV   + +  PVM+HRA+ GS ERFIG+++EN
Sbjct: 468 TLTDAIGRAWQCGTMQVDFSMPIRLGAEYVAEDNSRKVPVMLHRAILGSFERFIGMLLEN 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G LP+WL+P+Q +V  I+    +YA+ +   LK     +E+D RNE I +KIREHS++
Sbjct: 528 YSGALPMWLAPVQVVVLNISEGQSDYARSVTQSLKKQGFRVESDLRNEKITFKIREHSVQ 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K+P II+ GDKE    ++ +R  G+     + + + I  L  +
Sbjct: 588 KVPYIIVVGDKERDAATVAVRARGNADLGTMPISNLIARLLAD 630


>gi|253996955|ref|YP_003049019.1| threonyl-tRNA synthetase [Methylotenera mobilis JLW8]
 gi|253983634|gb|ACT48492.1| threonyl-tRNA synthetase [Methylotenera mobilis JLW8]
          Length = 635

 Score =  664 bits (1713), Expect = 0.0,   Method: Composition-based stats.
 Identities = 317/646 (49%), Positives = 440/646 (68%), Gaps = 18/646 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +  PDGS ++F +  T ++VA +I   LAK A+A  +N K+ D S  +  +  +
Sbjct: 1   MPV---IRLPDGSQRSFDLPVTVAEVAMNIGAGLAKAALAGKVNDKLVDTSYLIEVDSDL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT ++P  L VIRHS AH++A AV+ ++P+ QV IGP+I++GFYYDF  ++PF+ ++L
Sbjct: 58  AIITDKNPEGLDVIRHSAAHLLAYAVKELFPDAQVTIGPVIDNGFYYDFSYKRPFTPEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEKKM E+  +D P  ++ L   +A   F+S  E YK EI+ESIP+ ++V+LY +G +
Sbjct: 118 IAIEKKMAELAKKDEPVTRKVLPRAEAVAYFKSIGEQYKAEIIESIPSDDDVSLYTEGNF 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV STG++K F KLMK+AGAYWRGDSN  ML R+YGTAW  + EL  YL+ LE
Sbjct: 178 TDLCRGPHVPSTGKIKSF-KLMKLAGAYWRGDSNNEMLQRVYGTAWRNKDELEAYLFQLE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+EKRDHRKL +++D FH+ +D  G++FWH +GW I+Q +  YMR+  K   Y+E+ TP 
Sbjct: 237 EAEKRDHRKLGKQLDYFHMQDDAPGMVFWHPRGWSIWQEVEQYMRQMFKSFGYQEVRTPT 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHW +YR NMF       T  + R +A+KPMNCPGHV +FN+ L SYR+L
Sbjct: 297 VMDKTLWEKSGHWQNYRDNMFV------TSSENREYAVKPMNCPGHVQIFNNQLHSYRDL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+  E      ++   Y DF
Sbjct: 351 PLRLAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQIEAEVADFIQMLYKAYGDF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF  ++VKLSTRPEKRVG+D  WD AE             + + +   +  GEGAFYGPK
Sbjct: 411 GFNDVLVKLSTRPEKRVGADETWDKAEAA------LANALNANNLAFDLQPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD++GR WQCGTIQ+DFNLP R  A YV   + +  PVM+HRA+ GS+ERFIGI+
Sbjct: 465 IEFTLKDSLGRLWQCGTIQLDFNLPERLGAEYVAEDNSRQRPVMLHRAIVGSMERFIGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IEN+ G +PLWL+P+Q +V  I+ S  +Y +++   L+ + +  E D RNE I YKIREH
Sbjct: 525 IENYAGAMPLWLAPVQVMVLNISESQADYVRQVVETLRQNGIRCEFDLRNEKITYKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           S++K+P +++ G++E     + +R         + +   I  L  E
Sbjct: 585 SMQKMPYLLVAGEREMQAGHLAVRTRKGEDLGSMPIDALIERLKAE 630


>gi|302874879|ref|YP_003843512.1| threonyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|307690504|ref|ZP_07632950.1| threonyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|302577736|gb|ADL51748.1| threonyl-tRNA synthetase [Clostridium cellulovorans 743B]
          Length = 635

 Score =  664 bits (1713), Expect = 0.0,   Method: Composition-based stats.
 Identities = 303/643 (47%), Positives = 421/643 (65%), Gaps = 16/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            +K++  DGSI          +VA+ +S SLAK A+A  I+G+V DL   + ++ S+EI+
Sbjct: 1   MLKVSLKDGSIVEVEEGKKIIEVAKQLSSSLAKAALAGRIDGEVKDLMTEINKDCSLEIL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D    + +RH+ +HI+A+AV+ ++P V++AIGP IE+GFYYDFD + P + + L +I
Sbjct: 61  TFDDEEGRSTLRHTASHILAQAVKRLYPNVKLAIGPSIENGFYYDFDADFPITPELLEKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M +II  +    K  L  E+A +  E K+E YKV+++E +P    ++ Y QGE+ DL
Sbjct: 121 EKEMNKIIKENLKLEKFELPREEAIKYMEEKQELYKVKLIEDLPLDAVISFYTQGEFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPHV  TG VK   KL  VAGAYWRGD N   L RIYGTA+  +Q+L  YL  LEE++
Sbjct: 181 CAGPHVIGTGMVK-AVKLTSVAGAYWRGDVNNKSLQRIYGTAFTKKQDLDDYLNMLEEAK 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLD 301
           KRDHRKL +E++LF + E+G G  F+  KG  +  +L  Y R    K  Y+EI TP +L 
Sbjct: 240 KRDHRKLGKELELFTLLEEGPGFPFFLPKGMIVRNSLEDYWRVIHKKAGYQEIKTPIILS 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW QSGHWD Y+ NM+       T  D + FA+KPMNCPG +  + + L SYRELP+R
Sbjct: 300 EELWHQSGHWDHYKENMYF------TSIDEKPFAVKPMNCPGSILAYKNALHSYRELPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAE G V+R+E SG+LHGLMRVR FTQDDAH+F TK+Q+ +E L +  LI   YK+FGFE
Sbjct: 354 LAELGLVHRHELSGALHGLMRVRCFTQDDAHIFMTKDQITDELLDLIKLIDDFYKNFGFE 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPE  +GSD  W+ A N ++  LD         ++  +  G+GAFYGPK ++
Sbjct: 414 YF-VELSTRPENSMGSDEDWELATNGLRTALDKAG------LSYKINEGDGAFYGPKIDF 466

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L+D+IGR WQCGTIQ+DF LP RF+  Y+    EK  PVM+HR VFGSIERFIGI+IE+
Sbjct: 467 HLRDSIGRTWQCGTIQLDFQLPERFDIDYIGPDGEKHRPVMVHRVVFGSIERFIGILIEH 526

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           F G  P WL+P+Q  V  IT S+  Y +EIA +L+   + +E+D RNE I YKIRE  ++
Sbjct: 527 FAGAFPAWLAPVQVKVMNITDSSKGYVEEIARVLEEKGIRVESDLRNEKIGYKIREAQLQ 586

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIP +I+ G+KE +E++I +R         +S+ +    L +E
Sbjct: 587 KIPYMIVIGEKEMNEKTIAVRSRKDGDIGTMSIEEFSNKLLEE 629


>gi|284801950|ref|YP_003413815.1| threonyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284995092|ref|YP_003416860.1| threonyl-tRNA synthetase [Listeria monocytogenes 08-5923]
 gi|284057512|gb|ADB68453.1| threonyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284060559|gb|ADB71498.1| threonyl-tRNA synthetase [Listeria monocytogenes 08-5923]
          Length = 640

 Score =  664 bits (1713), Expect = 0.0,   Method: Composition-based stats.
 Identities = 263/648 (40%), Positives = 407/648 (62%), Gaps = 20/648 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K+TFPDG++K F    + +D+A SIS  L KKA+A  +NG++ DL  P+  +G+IEI+T
Sbjct: 1   MKITFPDGAVKEFEPGVSTADIAASISPGLKKKALAGKLNGELLDLVTPIHEDGAIEIVT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+   +L ++RHS AH+MA+A++ ++P+V+  +GP IE GFYYD D E   S + L +IE
Sbjct: 61  PDHEDALGILRHSTAHLMAQALKRLYPDVKFGVGPAIESGFYYDIDTEAVISDESLVEIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+MQ+I+  + P  ++ +S E+A + F++  + YK+E++E+IP  E VT+Y QGE+FDLC
Sbjct: 121 KEMQKIVRENVPIEREVVSREEAIKRFKAIGDQYKLELIEAIPEDETVTIYTQGEFFDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RG HV STG+++ F KL+ VAGAYWRGDSN  ML RIYGTA+  +  L +++   +E+++
Sbjct: 181 RGVHVPSTGKIQVF-KLLSVAGAYWRGDSNNKMLQRIYGTAFFDKNGLKEFIQMQKEAKE 239

Query: 244 RDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           RDHRKL +E++LF  + +   G+  W  KG  I + +  Y+  K +   Y  + TP + +
Sbjct: 240 RDHRKLGKELELFTNSIEVGQGLPLWLPKGATIRRVIERYIVDKEERLGYNHVYTPIMAN 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             L++ SGHWD Y  +MF     D+         L+PMNCP H+ ++ + + SYRELP+R
Sbjct: 300 VELYKTSGHWDHYHEDMFPTMKMDN-----EELVLRPMNCPHHMMIYKNDIHSYRELPIR 354

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AE G ++R E SG+L GL RVRG T +DAHVF   +Q+ +E  ++  LI+ +YKDF   
Sbjct: 355 IAELGLMHRYEMSGALSGLQRVRGMTLNDAHVFVRPDQIKDEFKRVVELILEVYKDFDIT 414

Query: 422 KIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
               +LS R      K    DA+W+ A+ ++K  +D ++      ++     GE AFYGP
Sbjct: 415 DYSFRLSYRDPKNTEKYFDDDAMWEKAQAMLKSAMDEME------MDYFEAEGEAAFYGP 468

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  +K AIG++    T+Q+DF LP RF+  Y+    EK  PV+IHR V  ++ERF+  
Sbjct: 469 KLDVQVKTAIGKEETLSTVQLDFLLPERFDLTYIGEDGEKHRPVVIHRGVVSTMERFVAY 528

Query: 538 MIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +IE +KG  P WL+P+Q  +  +   + ++YA+ + + L+   L  E D RNE + YKIR
Sbjct: 529 LIEEYKGAFPTWLAPVQMEIIPVNADAHLDYAKGVQDKLQRAGLRAEVDDRNEKLGYKIR 588

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           E   KKIP  ++ GD+E    S+ +RR+GS  ++ + L   I  +  E
Sbjct: 589 EAQTKKIPYALVLGDQEVEAGSVNVRRYGSKDSETMDLDAFIAQVVAE 636


>gi|229133217|ref|ZP_04262049.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
 gi|228650236|gb|EEL06239.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
          Length = 639

 Score =  664 bits (1712), Expect = 0.0,   Method: Composition-based stats.
 Identities = 282/644 (43%), Positives = 432/644 (67%), Gaps = 17/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEII 62
            I++ FPDGS+K F    T  ++A +IS SL KKAVA  +N K  DL   + E   +EII
Sbjct: 5   MIEIKFPDGSVKEFVKGITLEEIAGAISSSLKKKAVAGKVNDKSFDLRRNIEESAKVEII 64

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +    + + RHS AHI+A+AV+ I+ +V + +GP+IE+GFYYD D +   + ++L +I
Sbjct: 65  TMDSDEGVKIARHSAAHILAQAVKRIYGDVNLGVGPVIENGFYYDMDLQSSVNVEDLPKI 124

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M+ II  +    +  +S E+A+ELF+   ++ K+E+LE+IP  E+VTLY+QGE+ DL
Sbjct: 125 EKEMKNIINENVKIERVEVSREEAKELFQEMNDSLKLELLEAIPNGESVTLYKQGEFVDL 184

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ STG +K F     V+GAYWRGDSN  +L RIYG A+++QQ+L +YL+F+EE+ 
Sbjct: 185 CRGPHLPSTGYLKAFQLTH-VSGAYWRGDSNNQVLQRIYGVAFSSQQKLEEYLHFVEEAA 243

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KR+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R  + + +Y+E+ TP +++
Sbjct: 244 KRNHRKLGSELELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQNEYNYQEVRTPFMMN 303

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           Q LW++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R
Sbjct: 304 QELWEKSGHWGHYKDNMYFSEV------DHKSFALKPMNCPGHMLMFKNKLHSYRELPIR 357

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           + EFG V+R+E SG+L+GL+RVR F QDDAH+F T EQ+ +E   +   I  +YK FGFE
Sbjct: 358 MCEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPEQIEDEIKSVLAQIDYVYKTFGFE 417

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPE  +G D LW+ AE  ++ VL ++           +  G+GAFYGPK ++
Sbjct: 418 Y-EVELSTRPEDSMGDDKLWEQAELALENVLQSLNY------KYRLNEGDGAFYGPKIDF 470

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+ R  QCGT+Q+DF +P +F+  Y++ ++EK  PV+IHRAV GS++RF+ I+IE+
Sbjct: 471 HIKDALNRSHQCGTVQLDFQMPEKFDLNYIDENNEKRRPVVIHRAVLGSLDRFLAILIEH 530

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVE-YAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           F G  P W++P+Q  V  ++++  E YA  IA+ L    + +E D R+E + YKIRE  +
Sbjct: 531 FGGAFPAWVAPVQVKVIPVSNAVHEKYANRIADKLAQAGIRVERDIRDEKLGYKIREAQM 590

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +K+P +++ GDKE    ++ +R++G   ++ V L   +  + +E
Sbjct: 591 QKVPYVLVIGDKEMESEAVNVRKYGEEKSEVVELDAFVESMKEE 634


>gi|222056447|ref|YP_002538809.1| threonyl-tRNA synthetase [Geobacter sp. FRC-32]
 gi|221565736|gb|ACM21708.1| threonyl-tRNA synthetase [Geobacter sp. FRC-32]
          Length = 645

 Score =  664 bits (1712), Expect = 0.0,   Method: Composition-based stats.
 Identities = 288/644 (44%), Positives = 420/644 (65%), Gaps = 18/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEII 62
           +I +  PDGS +  P  A+  D+A SI   LAK A+A  I+G + DL+  + +GS +EII
Sbjct: 12  EITVKLPDGSERTLPRGASVYDLAASIGTGLAKAAIAGRIDGDLVDLATVLPDGSKVEII 71

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T + P +L +IRHS +H+MA+AV++++PE +V IGP IE GFYYDFD + PF+ ++L +I
Sbjct: 72  TEKSPEALEIIRHSTSHLMAQAVKALFPEAKVTIGPAIETGFYYDFDVDHPFTPEDLEKI 131

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E KMQE+   +    +Q LS   A  LF    E+YKVE++E + A   V+LYRQG++ DL
Sbjct: 132 ENKMQELAKANLKIERQVLSGADAIRLFGDLGESYKVELIEDLGA-ATVSLYRQGDFVDL 190

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ ST  +K F KL  +AGAYWRGD  R ML R+YGTA+  ++EL  YL  +EE++
Sbjct: 191 CRGPHLPSTSHIKAF-KLTSIAGAYWRGDEKRKMLQRVYGTAFTDKKELDAYLARIEEAK 249

Query: 243 KRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVL 300
           +RDHRKL +E+DLF  +++   G++ WH KG  +   +  + RR+ +K DY+ +  PQ+L
Sbjct: 250 RRDHRKLGKELDLFSFSDEVGAGLVIWHPKGAMLRTIIEDFERREHLKRDYDIVVGPQIL 309

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
              LWQ+SGH+D+YR NM+  +       D ++F +KPMNC  H+ ++   L+SYR+LP+
Sbjct: 310 KTDLWQRSGHYDNYRENMYFTEV------DEQSFGIKPMNCLSHMMIYKSRLRSYRDLPL 363

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RL E G+V+R+E +G LHGL+RVR FTQDDAH+ CT EQ+ +E   + + +  +   FGF
Sbjct: 364 RLFELGTVHRHERAGVLHGLLRVRCFTQDDAHILCTPEQLDSEIKGVISFVQDVMGVFGF 423

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           E  M +LSTRPEK +GSD  WD A N + G L              +  G+GAFYGPK +
Sbjct: 424 EFEM-ELSTRPEKSIGSDEDWDRATNALLGALKDSGRP------FEINEGDGAFYGPKID 476

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
             L+D++ R WQC TIQ DF LP RF+  Y+++  EK  PVM+HR + GSIERFIG++IE
Sbjct: 477 IKLRDSLDRRWQCATIQCDFTLPERFDLTYIDADGEKKRPVMVHRVILGSIERFIGVLIE 536

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +F G+ P+WLSP+Q +V T+T + + +AQ++   L++  L ++ DFRNE + +KIRE  +
Sbjct: 537 HFAGSFPVWLSPVQVVVLTVTDNQLSFAQQVYAELRAAGLRVQQDFRNEKLGFKIREAQL 596

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +KIP +++ GDKE     +  R         +   D I  + KE
Sbjct: 597 QKIPYMLVIGDKEVEAGMVTPRFRDGKNLDSMKCSDFIEFIEKE 640


>gi|253577580|ref|ZP_04854892.1| threonyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str.
           D14]
 gi|251843049|gb|EES71085.1| threonyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str.
           D14]
          Length = 645

 Score =  664 bits (1712), Expect = 0.0,   Method: Composition-based stats.
 Identities = 254/649 (39%), Positives = 405/649 (62%), Gaps = 21/649 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           + +  PDGS++ +   ++  DVA SIS  L K A+A  ING   DL+  + +G+ +EIIT
Sbjct: 3   VSVILPDGSVREYAEGSSLEDVAASISSGLRKNALAGKINGVAVDLNTKLVDGAKVEIIT 62

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWP--EVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
            +    L ++RHS AH+MA+AV+ ++   EV++ IGP+IEDGFYYD D E P + ++L +
Sbjct: 63  GDSQEGLEIMRHSSAHLMAQAVKRLFGNKEVKLGIGPVIEDGFYYDMDLEHPLNPEDLQK 122

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK+M+ II  + P  ++ +S E+A  ++    + YK+EI+  +P    +++Y QGE+FD
Sbjct: 123 IEKEMERIIGENLPITRREVSREEALAIYTELDDPYKLEIIRELPEGSVISIYDQGEFFD 182

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG++K F KL+ VAGAYWRG+SN  ML RIYGTA+  + +L  +L+ LEE+
Sbjct: 183 LCRGPHVPSTGKIKVF-KLLSVAGAYWRGNSNNKMLQRIYGTAFMKKADLDHHLHMLEEA 241

Query: 242 EKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQV 299
           +KRDHRKL +E+++F      G G+  W  KG  + +TL  Y+    +   Y+ + TP +
Sbjct: 242 KKRDHRKLGKELNIFTFNNLVGQGLPIWLPKGATVRRTLERYIVDIEERLGYQHVYTPVL 301

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +  L++ SGHW+ Y+ +MF          D   F L+PMNCP H+ V+   ++SYR+LP
Sbjct: 302 GNVDLYKTSGHWEHYQEDMFPKM-----AIDTEEFVLRPMNCPHHMMVYKSDMRSYRDLP 356

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G  +R E SG+L GL RVR  T +DAH+FC  +Q+ +E  ++ +LI  +Y DFG
Sbjct: 357 IRIAELGMQHRYEMSGALTGLHRVRSMTLNDAHIFCRLDQIKDEFKRVLDLIKQVYNDFG 416

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
             +   +LS R  +       +D +W+ A+ +++ V++         +      GE AFY
Sbjct: 417 IHEYRFRLSYRDPQDTEKYYQNDEMWNTAQRMLREVVEEAG------LPFFEAEGEAAFY 470

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G++    T+Q+DF LP RF   YV    +K  PV++HR + G++ERF 
Sbjct: 471 GPKLDVQIKTALGKEETLSTVQIDFLLPERFELEYVGDDGQKHRPVVLHRGILGTMERFT 530

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
             ++ENF GNLPLWL+P+QA V  ++S+   YA+++ + L++  +  E+D RNE + YKI
Sbjct: 531 AFLLENFAGNLPLWLAPVQAKVLPVSSNFDAYARQVEDKLRAAGIRAESDLRNEKLGYKI 590

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           RE  ++K+P +++ G+ E +  ++ +R+ G       ++ + I  L +E
Sbjct: 591 REAQLEKLPYMLVVGENEQNAGTVSVRKRGQGDLGAKAVDEVIAQLQEE 639


>gi|126651397|ref|ZP_01723604.1| threonyl-tRNA synthetase [Bacillus sp. B14905]
 gi|126591926|gb|EAZ86009.1| threonyl-tRNA synthetase [Bacillus sp. B14905]
          Length = 643

 Score =  664 bits (1712), Expect = 0.0,   Method: Composition-based stats.
 Identities = 261/655 (39%), Positives = 411/655 (62%), Gaps = 20/655 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           M   IKLTFPDG++K F    +  DVA SIS  L KKA A  ING + DL  P+  + +I
Sbjct: 1   MSEMIKLTFPDGAVKEFVKGTSTDDVALSISPGLRKKAYAGKINGVLVDLKTPIEEDAAI 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D  +L ++RHS AH+ A+A++ ++P+V++ IGP+I+ GFYYD D   P ++++L
Sbjct: 61  AIITQDDAEALEILRHSTAHLTAQAIKRLFPDVKLGIGPVIDGGFYYDIDSPTPITAEDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEK+M++IIA +    ++ +S  +A+ ++E   + YK+E+LE+IPA E V++Y QGE+
Sbjct: 121 PAIEKEMKKIIAENLEVERKNVSRAEAQAMYEKIGDEYKLELLEAIPADEQVSIYYQGEF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRG HV STG++++F KL+ +AGAYWRG+S+  ML RIYGTA+  ++EL  +L  LE
Sbjct: 181 FDLCRGIHVPSTGKLREF-KLLSLAGAYWRGNSDNKMLQRIYGTAFFKKEELKHHLQMLE 239

Query: 240 ESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTP 297
           E+++RDHRK+ +E++LF  ++    G+  W   G  I + +  Y+  +++   Y+ + TP
Sbjct: 240 EAKERDHRKIGKELELFTTSQKVGQGLPLWLPNGATIRRVIERYIVDKELSLGYKHVYTP 299

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +  + L+Q SGHWD Y+ ++F     D+      T  ++PMNCP H+ V+ + + SYR 
Sbjct: 300 VLGSKELYQTSGHWDHYQDSIFPPMEMDN-----ETLIMRPMNCPHHMMVYKNSMHSYRS 354

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AE G+++R E SG++ GL RVRG T +DAH+F   +Q+  E  K+  LI+ +YKD
Sbjct: 355 LPLRIAELGTMHRYEMSGAVSGLQRVRGMTLNDAHIFVRPDQIKAEFQKVVQLILEVYKD 414

Query: 418 FGFEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           F       +LS R      K    DA+W+ A++++K  +D +       ++     GE A
Sbjct: 415 FDLNDYSFRLSYRDPADTEKYFNDDAMWEKAQSMLKEAMDELG------LDYFEAEGEAA 468

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  +K AIG++    T+Q+DF LP RF+  YV    +   PV+IHR V  ++ER
Sbjct: 469 FYGPKLDVQVKTAIGKEETLSTVQLDFLLPERFDLSYVGEDGKPHRPVVIHRGVVSTMER 528

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETIN 592
           F+  +IE +KG  P WL+P+Q  V  +++    +YA++I   L +  L +E D R E + 
Sbjct: 529 FVAFLIEEYKGAFPTWLAPVQVEVIPVSNEAHFDYAKQIEEQLTAAGLRVEMDDREEKLG 588

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLP 647
           YKIRE  +KKIP +++ GDKE     + +RR+GS  ++ +S  + +  +  E   
Sbjct: 589 YKIREAQMKKIPYMLVIGDKEVEASGVNVRRYGSKDSETISFENFLAAIKAEITK 643


>gi|16803599|ref|NP_465084.1| threonyl-tRNA synthetase [Listeria monocytogenes EGD-e]
 gi|224501501|ref|ZP_03669808.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL R2-561]
 gi|22654119|sp|Q8Y6X2|SYT_LISMO RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|16410988|emb|CAC99637.1| threonyl-tRNA synthetase [Listeria monocytogenes EGD-e]
          Length = 640

 Score =  664 bits (1712), Expect = 0.0,   Method: Composition-based stats.
 Identities = 263/648 (40%), Positives = 407/648 (62%), Gaps = 20/648 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K+TFPDG++K F    + +D+A SIS  L KKA+A  +NG++ DL  P+  +G+IEI+T
Sbjct: 1   MKITFPDGAVKEFEPGVSTADIAASISPGLKKKALAGKLNGELLDLVTPIHEDGAIEIVT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+   +L ++RHS AH+MA+A++ ++P+V+  +GP IE GFYYD D E   S + L +IE
Sbjct: 61  PDHEDALGILRHSTAHLMAQALKRLYPDVKFGVGPAIESGFYYDIDTEAVISDESLVEIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+MQ+I+  + P  ++ +S E+A + F++  + YK+E++E+IP  E VT+Y QGE+FDLC
Sbjct: 121 KEMQKIVRENVPIEREVVSREEAIKRFKAIGDQYKLELIEAIPEDETVTIYTQGEFFDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RG HV STG+++ F KL+ VAGAYWRGDSN  ML RIYGTA+  +  L +++   +E+++
Sbjct: 181 RGVHVPSTGKIQVF-KLLSVAGAYWRGDSNNKMLQRIYGTAFFDKNGLKEFIQMQKEAKE 239

Query: 244 RDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           RDHRKL +E++LF  + +   G+  W  KG  I + +  Y+  K +   Y  + TP + +
Sbjct: 240 RDHRKLGKELELFTNSIEVGQGLPLWLPKGATIRRVIERYIVDKEERLGYNHVYTPIMAN 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             L++ SGHWD Y  +MF     D+         L+PMNCP H+ ++ + + SYRELP+R
Sbjct: 300 VELYKTSGHWDHYHEDMFPTMKMDN-----EELVLRPMNCPHHMMIYKNDIHSYRELPIR 354

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AE G ++R E SG+L GL RVRG T +DAHVF   +Q+ +E  ++  LI+ +YKDF   
Sbjct: 355 IAELGMMHRYEMSGALSGLQRVRGMTLNDAHVFVRPDQIKDEFKRVVELILEVYKDFDIT 414

Query: 422 KIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
               +LS R      K    DA+W+ A+ ++K  +D ++      ++     GE AFYGP
Sbjct: 415 DYSFRLSYRDPKNTEKYFDDDAMWEKAQAMLKSAMDEME------MDYFEAEGEAAFYGP 468

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  +K AIG++    T+Q+DF LP RF+  Y+    EK  PV+IHR V  ++ERF+  
Sbjct: 469 KLDVQVKTAIGKEETLSTVQLDFLLPERFDLTYIGEDGEKHRPVVIHRGVVSTMERFVAY 528

Query: 538 MIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +IE +KG  P WL+P+Q  +  +   + ++YA+ + + L+   L  E D RNE + YKIR
Sbjct: 529 LIEEYKGAFPTWLAPVQMEIIPVNADAHLDYAKGVQDKLQRAGLRAEVDDRNEKLGYKIR 588

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           E   KKIP  ++ GD+E    S+ +RR+GS  ++ + L   I  +  E
Sbjct: 589 EAQTKKIPYALVLGDQEVEAGSVNVRRYGSKDSETMDLDAFIAQVVAE 636


>gi|215919162|ref|NP_820316.2| threonyl-tRNA synthetase [Coxiella burnetii RSA 493]
 gi|206584046|gb|AAO90830.2| threonyl-tRNA synthetase [Coxiella burnetii RSA 493]
          Length = 660

 Score =  664 bits (1712), Expect = 0.0,   Method: Composition-based stats.
 Identities = 298/646 (46%), Positives = 428/646 (66%), Gaps = 18/646 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP    +  PDGS+K F    +   VAESI  SLAK A+A  I+  + D+S  + ++ S+
Sbjct: 10  MP---TIQLPDGSVKQFSKPVSVQAVAESIGTSLAKPALAGKIDDHLVDVSFIIDKDVSL 66

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +DP  L VIRHS AH++A AV+ ++P+ +V IGP++EDGFYYDF  E+ F+ ++L
Sbjct: 67  RIITEKDPEGLEVIRHSAAHLLAHAVKELFPKAEVTIGPVVEDGFYYDFAFERSFTPEDL 126

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IE+KM+ +   D    ++ LS ++A  LF+   E YKVEI+  IP +E +T Y+QG++
Sbjct: 127 EKIEEKMRSLAKADLAVERRVLSRDEALTLFKKMGERYKVEIIRDIPKEEILTAYQQGDF 186

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV  TG +K F KL K+AGAYWRGDSN  ML RIYGTAW   + L  YLY LE
Sbjct: 187 IDLCRGPHVPRTGMLKAF-KLTKLAGAYWRGDSNNEMLQRIYGTAWADTKALKAYLYRLE 245

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQ 298
           E+EKRDHR LA++MDLFH   +  G +FWH  GW I   +  Y+R    K  Y+E++TPQ
Sbjct: 246 EAEKRDHRLLAKKMDLFHFQPESPGNVFWHPNGWSIILQMREYIRHITHKYGYQEVHTPQ 305

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D  LW +SGH + +  ++F++        + + + +KPM+CP HV +FN G+KSYR+L
Sbjct: 306 LIDASLWDKSGHLEKFGDDIFSL------PLEPQQYVIKPMSCPAHVQIFNQGVKSYRDL 359

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R AEFG+ +RNEPSG+LHGLMR+RGF QDDAH+FCT++Q+ +E     + +  +Y DF
Sbjct: 360 PLRYAEFGACHRNEPSGTLHGLMRLRGFVQDDAHIFCTEDQIQSEVSAFIDQLHEVYADF 419

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF +++ KLSTRPEKRVGSD +W  AE  +   L+      +  +   +L GEGAFYGPK
Sbjct: 420 GFTEVIHKLSTRPEKRVGSDEVWTKAEQALAEALN------RKGVEWDILPGEGAFYGPK 473

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ L+D +GR WQCGT+QVDF++P R  A Y+     K  PVMIHRA+ GS ERF+GI+
Sbjct: 474 IEFSLRDCLGRIWQCGTVQVDFSVPERLGAHYIAEDGSKKPPVMIHRAILGSFERFLGIL 533

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           +E   G LPLWL+P+Q +V  IT    +Y  +    L++  +   +D RNE I +KIREH
Sbjct: 534 LEESAGKLPLWLAPVQVVVMNITDRQADYVGQTVENLQNLGIRAHSDLRNEKIGFKIREH 593

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +I ++P +++ GD+E +++++ +R      +  ++L +    L  E
Sbjct: 594 TIARVPYLVVIGDREVADKTLSVRALEDEASTTITLEEFARQLKAE 639


>gi|15892219|ref|NP_359933.1| threonyl-tRNA synthetase [Rickettsia conorii str. Malish 7]
 gi|22654126|sp|Q92IX4|SYT_RICCN RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|15619354|gb|AAL02834.1| threonyl-tRNA synthetase [Rickettsia conorii str. Malish 7]
          Length = 635

 Score =  664 bits (1712), Expect = 0.0,   Method: Composition-based stats.
 Identities = 328/644 (50%), Positives = 443/644 (68%), Gaps = 15/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I ++FPDGSIK F  + T  +VA +IS SLAK A+   ING++ DLS  +  +  + I+
Sbjct: 1   MINISFPDGSIKQFAKNITAYEVANAISMSLAKAAMVAEINGELQDLSIVIDNDCKLRIL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +DP  L +IRH  AH+ AEAV+ ++PE QV IGP IE+G+YYDF +++PF++D+LA I
Sbjct: 61  TAQDPECLEIIRHDAAHLTAEAVKELFPETQVTIGPAIENGYYYDFARDKPFTTDDLAVI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E KMQE+  ++    ++    +KA E F+S  E YK EI+ SIPA E +TLYRQG + DL
Sbjct: 121 EAKMQELSQKNEQVTRELWDRDKAVEFFKSIGEHYKAEIIASIPAGEPITLYRQGNFIDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH  STG VK F KLMKVAGAYWRGDS   ML RIYGTAW T+++L  YL  LEE+E
Sbjct: 181 CRGPHAPSTGVVKHF-KLMKVAGAYWRGDSRNEMLQRIYGTAWATKEQLDSYLLMLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD 301
           KRDHRKL RE+DLFH  E+  G++FWH KGW I+ T+  Y+R+KI+ + Y E+ TP ++D
Sbjct: 240 KRDHRKLGRELDLFHFQEEAQGMVFWHDKGWSIYNTIEQYIRKKIRKNGYTEVKTPVLVD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW+ +R +MFA++  D T       ALKPMNCP HV +F  G+KSYR+LP+R
Sbjct: 300 KSLWEASGHWEKFRDDMFALETDDKT------LALKPMNCPCHVQIFKQGIKSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           ++EFG  +RNE SG+LHGLMRVR   QDDAH+FC  EQ+ +E +    L+  +YKDFGF 
Sbjct: 354 MSEFGLCHRNEASGALHGLMRVRSLVQDDAHIFCAAEQITDETVSFCKLLTEVYKDFGFT 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            I VK S RPE R GS+ +WD AEN +K  ++      Q   N  +  GEGAFYGPK E+
Sbjct: 414 DIKVKFSDRPEIRAGSNEVWDKAENALKEAVE------QAGFNYTLNPGEGAFYGPKLEF 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
           +L DAIGR WQCGT+Q+DF LP R +A YV +  EK  PVM+HRA+ GS+ERFIGI+IE 
Sbjct: 468 VLTDAIGRQWQCGTLQMDFVLPERLDASYVAASGEKKRPVMLHRAILGSLERFIGILIEE 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  PLWL+P+Q  + TITS   +YA E+   L  + +  + +   + INYKIRE S +
Sbjct: 528 YAGRFPLWLAPVQVAIATITSDLNDYALEVQKALIDNGVRTDFNISPDKINYKIREFSNQ 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           KIP+I + G +E   + + IRR G+T  + +S+   I ++ +E+
Sbjct: 588 KIPMIAVIGKQEQENKQVAIRRLGTTDQEVLSVEQLIAVVKEEN 631


>gi|313902061|ref|ZP_07835474.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Thermaerobacter
           subterraneus DSM 13965]
 gi|313467670|gb|EFR63171.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Thermaerobacter
           subterraneus DSM 13965]
          Length = 638

 Score =  664 bits (1712), Expect = 0.0,   Method: Composition-based stats.
 Identities = 280/642 (43%), Positives = 417/642 (64%), Gaps = 16/642 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            I +  P GS +  P   T  +VA+ I   LA+ AVA   NG+V DL+ P+  +G +EI+
Sbjct: 1   MIVVELPGGSRRELPRGITPLEVAQQIGPRLARDAVAARWNGQVIDLNRPLEEDGRLEIL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T  D     V RHS AH+MA+AV+ +WPE Q+A+GP +EDGF+YD    +P S+D+L  I
Sbjct: 61  TFADEAGREVYRHSTAHLMAQAVKRLWPEAQLAVGPPLEDGFFYDIQTPRPLSTDDLEAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E++M  I+  D P  ++ +S ++A +LF  + E YKVEI+ESIP  E +T+Y QGE+ DL
Sbjct: 121 EQEMARIVQEDLPIRRRPVSRQEALDLFRQRGERYKVEIIESIPEDEPLTVYEQGEFVDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ STG++K F KL  VAGAYW+GD   PML+RIYGTA+ + +EL ++L  LEE+ 
Sbjct: 181 CRGPHLPSTGRIKAF-KLTGVAGAYWKGDEKGPMLTRIYGTAFPSARELEEHLQRLEEAR 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           +RDHRKL  E+DLFH  E   G  FWH KG  ++  L  + R  + +  Y+E+ TP++L 
Sbjct: 240 RRDHRKLGPELDLFHFEEVAPGYAFWHPKGATVYGLLEQFSRELQARYGYQEVRTPEILK 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             LW +SGHW+ YR NMF ++      ++   F +KPMNCPGH  ++   ++SYR+LP+R
Sbjct: 300 VDLWHRSGHWEHYRDNMFLIE------REDALFGVKPMNCPGHCLLYRSRIRSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAE+G + R E SG+LHGL+RVRGF QDDAH+F  ++Q+  E  ++  L+ +IY  FG  
Sbjct: 354 LAEYGRLARFERSGTLHGLLRVRGFEQDDAHLFVREDQIEEEIGRVLELVDTIYGTFG-M 412

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              +KL+TRPEK +G  ALW+ AE  +   L+          +  +  G+GAFYGPK ++
Sbjct: 413 PYEIKLATRPEKFMGDPALWERAEAALARALEAAGR------DYTLAPGDGAFYGPKLDF 466

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            + D++GR WQ  T+Q+DF +P RF+  YV++  ++  PVMIHRA+ GS+ERFIGI+IE+
Sbjct: 467 YVIDSLGRKWQTATVQLDFQMPIRFDLTYVDAAGQEQRPVMIHRAIMGSLERFIGILIEH 526

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  P+WL+P+Q  V  ++    +YA+ +   L++  L +E D R+E + YKIR+  ++
Sbjct: 527 YAGAFPVWLAPVQVRVLPVSDRHHDYARRVEERLRAAGLRVEVDARDEKLGYKIRQAQVE 586

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           K+P +++ GD+EA E  + +R          SL D + ++T+
Sbjct: 587 KVPYMLVVGDREAQEGQVAVRSRDRGDLGSQSLEDFVRLITE 628


>gi|73919786|sp|Q83C10|SYT_COXBU RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
          Length = 651

 Score =  663 bits (1711), Expect = 0.0,   Method: Composition-based stats.
 Identities = 298/646 (46%), Positives = 428/646 (66%), Gaps = 18/646 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP    +  PDGS+K F    +   VAESI  SLAK A+A  I+  + D+S  + ++ S+
Sbjct: 1   MP---TIQLPDGSVKQFSKPVSVQAVAESIGTSLAKPALAGKIDDHLVDVSFIIDKDVSL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +DP  L VIRHS AH++A AV+ ++P+ +V IGP++EDGFYYDF  E+ F+ ++L
Sbjct: 58  RIITEKDPEGLEVIRHSAAHLLAHAVKELFPKAEVTIGPVVEDGFYYDFAFERSFTPEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IE+KM+ +   D    ++ LS ++A  LF+   E YKVEI+  IP +E +T Y+QG++
Sbjct: 118 EKIEEKMRSLAKADLAVERRVLSRDEALTLFKKMGERYKVEIIRDIPKEEILTAYQQGDF 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV  TG +K F KL K+AGAYWRGDSN  ML RIYGTAW   + L  YLY LE
Sbjct: 178 IDLCRGPHVPRTGMLKAF-KLTKLAGAYWRGDSNNEMLQRIYGTAWADTKALKAYLYRLE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQ 298
           E+EKRDHR LA++MDLFH   +  G +FWH  GW I   +  Y+R    K  Y+E++TPQ
Sbjct: 237 EAEKRDHRLLAKKMDLFHFQPESPGNVFWHPNGWSIILQMREYIRHITHKYGYQEVHTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D  LW +SGH + +  ++F++        + + + +KPM+CP HV +FN G+KSYR+L
Sbjct: 297 LIDASLWDKSGHLEKFGDDIFSL------PLEPQQYVIKPMSCPAHVQIFNQGVKSYRDL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R AEFG+ +RNEPSG+LHGLMR+RGF QDDAH+FCT++Q+ +E     + +  +Y DF
Sbjct: 351 PLRYAEFGACHRNEPSGTLHGLMRLRGFVQDDAHIFCTEDQIQSEVSAFIDQLHEVYADF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF +++ KLSTRPEKRVGSD +W  AE  +   L+      +  +   +L GEGAFYGPK
Sbjct: 411 GFTEVIHKLSTRPEKRVGSDEVWTKAEQALAEALN------RKGVEWDILPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ L+D +GR WQCGT+QVDF++P R  A Y+     K  PVMIHRA+ GS ERF+GI+
Sbjct: 465 IEFSLRDCLGRIWQCGTVQVDFSVPERLGAHYIAEDGSKKPPVMIHRAILGSFERFLGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           +E   G LPLWL+P+Q +V  IT    +Y  +    L++  +   +D RNE I +KIREH
Sbjct: 525 LEESAGKLPLWLAPVQVVVMNITDRQADYVGQTVENLQNLGIRAHSDLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +I ++P +++ GD+E +++++ +R      +  ++L +    L  E
Sbjct: 585 TIARVPYLVVIGDREVADKTLSVRALEDEASTTITLEEFARQLKAE 630


>gi|16800662|ref|NP_470930.1| threonyl-tRNA synthetase [Listeria innocua Clip11262]
 gi|22654125|sp|Q92BF5|SYT_LISIN RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|16414081|emb|CAC96825.1| threonyl-tRNA synthetase [Listeria innocua Clip11262]
 gi|313618753|gb|EFR90658.1| threonyl-tRNA synthetase [Listeria innocua FSL S4-378]
          Length = 640

 Score =  663 bits (1711), Expect = 0.0,   Method: Composition-based stats.
 Identities = 265/648 (40%), Positives = 407/648 (62%), Gaps = 20/648 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K+TFPDG++K F    + +D+A SIS  L KKA+A  +NG++ DL  P+  +G+IEI+T
Sbjct: 1   MKITFPDGAVKEFEPGVSTADIAASISPGLKKKALAGKLNGELLDLVTPIHEDGAIEIVT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+   +L ++RHS AH+MA+A++ ++P+V+  +GP IE GFYYD D E   S + L +IE
Sbjct: 61  PDHEDALGILRHSTAHLMAQALKRLYPDVKFGVGPAIESGFYYDIDTEAVISDESLVEIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+MQ+I+  + P  ++ +S E+A + FE+  + YK+E++E+IP  E VT+Y QGE+FDLC
Sbjct: 121 KEMQKIVRENVPIEREVVSREEAIKRFEAIGDQYKLELIEAIPEDETVTIYTQGEFFDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RG HV STG+++ F KL+ VAGAYWRGDSN  ML RIYGTA+  +  L +++   +E+++
Sbjct: 181 RGVHVPSTGKIQVF-KLLSVAGAYWRGDSNNKMLQRIYGTAFFDKNGLKEFIQMQKEAKE 239

Query: 244 RDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           RDHRKL +E+DLF  + +   G+  W  KG  I + +  Y+  K +   Y  + TP + +
Sbjct: 240 RDHRKLGKELDLFANSIEVGQGLPLWLPKGATIRRVIERYIVDKEERLGYNHVYTPIMAN 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             L++ SGHWD Y  +MF     D+         L+PMNCP H+ ++ + + SYRELP+R
Sbjct: 300 VELYKTSGHWDHYHEDMFPTMKMDN-----EELVLRPMNCPHHMMIYKNDIHSYRELPIR 354

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AE G ++R E SG+L GL RVRG T +DAHVF   +Q+ +E  ++  LI+ +YKDF  +
Sbjct: 355 IAELGMMHRYEMSGALSGLQRVRGMTLNDAHVFVRPDQIKDEFKRVVELILEVYKDFDIK 414

Query: 422 KIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
               +LS R      K    DA+W+ A+ ++K  +D +       ++     GE AFYGP
Sbjct: 415 DYSFRLSYRDPKNTEKYFDDDAMWEKAQAMLKSAMDEMN------MDYFEAEGEAAFYGP 468

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  +K AIG++    T+Q+DF LP RF+  Y+    EK  PV+IHR V  ++ERF+  
Sbjct: 469 KLDVQVKTAIGKEETLSTVQLDFLLPERFDLTYIGEDGEKHRPVVIHRGVVSTMERFVAY 528

Query: 538 MIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +IE +KG  P WL+P+Q  +  +   + ++YA+ + + L+   L  E D RNE + YKIR
Sbjct: 529 LIEEYKGAFPTWLAPVQMELIPVNADAHLDYAKGVQDKLQRAGLRAEVDDRNEKLGYKIR 588

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           E   KKIP  ++ GD+E    S+ +RR+GS  ++ + L   I  +  E
Sbjct: 589 EAQTKKIPYALVLGDQEVEAGSVNVRRYGSKDSETMDLDAFIAQVVAE 636


>gi|254831960|ref|ZP_05236615.1| threonyl-tRNA synthetase [Listeria monocytogenes 10403S]
          Length = 640

 Score =  663 bits (1711), Expect = 0.0,   Method: Composition-based stats.
 Identities = 264/648 (40%), Positives = 408/648 (62%), Gaps = 20/648 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K+TFPDG++K F    + +D+A SIS  L KKA+A  +NG++ DL  P+  +G+IEI+T
Sbjct: 1   MKITFPDGAVKEFEPGVSTADIAASISPGLKKKALAGKLNGELLDLVTPIHEDGAIEIVT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+   +L ++RHS AH+MA+A++ ++P+V+  +GP IE GFYYD D E   S + L +IE
Sbjct: 61  PDHEDALGILRHSTAHLMAQALKRLYPDVKFGVGPAIESGFYYDIDTEAVISDESLVEIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+MQ+I+  + P  ++ +S E+A + F++  + YK+E++E+IP  E VT+Y QGE+FDLC
Sbjct: 121 KEMQKIVRENVPIEREVVSREEAIKRFKAIGDQYKLELIEAIPEDETVTIYTQGEFFDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RG HV STG+++ F KL+ VAGAYWRGDSN  ML RIYGTA+  +  L +++   +E+++
Sbjct: 181 RGVHVPSTGKIQVF-KLLSVAGAYWRGDSNNKMLQRIYGTAFFDKNGLKEFIQMQKEAKE 239

Query: 244 RDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           RDHRKL +E+DLF  + +   G+  W  KG  I + +  Y+  K +   Y  + TP + +
Sbjct: 240 RDHRKLGKELDLFANSIEVGQGLPLWLPKGATIRRVIERYIVDKEERLGYNHVYTPIMAN 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             L++ SGHWD Y  +MF     D+         L+PMNCP H+ ++ + + SYRELP+R
Sbjct: 300 VELYKTSGHWDHYHEDMFPTMKMDN-----EELVLRPMNCPHHMMIYKNDIHSYRELPIR 354

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AE G ++R E SG+L GL RVRG T +DAHVF   +Q+ +E  ++  LI+ +YKDF  +
Sbjct: 355 IAELGMMHRYEMSGALSGLQRVRGMTLNDAHVFVRPDQIKDEFKRVVELILEVYKDFDIK 414

Query: 422 KIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
               +LS R      K    DA+W+ A+ ++K  +D ++      ++     GE AFYGP
Sbjct: 415 DYSFRLSYRDPKNTEKYFDDDAMWEKAQAMLKSAMDEME------MDYFEAEGEAAFYGP 468

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  +K AIG++    T+Q+DF LP RF+  Y+    EK  PV+IHR V  ++ERF+  
Sbjct: 469 KLDVQVKTAIGKEETLSTVQLDFLLPERFDLTYIGEDGEKHRPVVIHRGVVSTMERFVAY 528

Query: 538 MIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +IE +KG  P WL+P+Q  +  +   + ++YA+ + + L+   L  E D RNE + YKIR
Sbjct: 529 LIEEYKGAFPTWLAPVQMEIIPVNADAHLDYAKGVQDKLQRAGLRAEVDDRNEKLGYKIR 588

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           E   KKIP  ++ GD+E    S+ +RR+GS  ++ + L   I  +  E
Sbjct: 589 EAQTKKIPYALVLGDQEVEAGSVNVRRYGSKDSETMDLDAFIAQVVAE 636


>gi|71275167|ref|ZP_00651454.1| Threonyl-tRNA synthetase, class IIa [Xylella fastidiosa Dixon]
 gi|170731158|ref|YP_001776591.1| threonyl-tRNA synthetase [Xylella fastidiosa M12]
 gi|238687955|sp|B0U5E3|SYT_XYLFM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|71163976|gb|EAO13691.1| Threonyl-tRNA synthetase, class IIa [Xylella fastidiosa Dixon]
 gi|167965951|gb|ACA12961.1| threonyl-tRNA synthetase [Xylella fastidiosa M12]
          Length = 635

 Score =  663 bits (1711), Expect = 0.0,   Method: Composition-based stats.
 Identities = 294/647 (45%), Positives = 423/647 (65%), Gaps = 17/647 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAING-KVCDLSDPVREGSI-EI 61
            I +T PDGS + F    +   VA +I   LAK  +A  I+G  + D SD +   +I  I
Sbjct: 1   MITITLPDGSRREFEGPVSVMQVAHAIGPGLAKATIAGQIDGGHLVDASDLIEHDAILRI 60

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           ITPED  +L +IRHSCAH++  AV+ ++PE ++ IGP+I DGFYYD   ++PF+ ++LA 
Sbjct: 61  ITPEDQEALEIIRHSCAHLVGHAVKQLYPEAKMVIGPVIADGFYYDIYSKRPFTPEDLAA 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESI-PAKENVTLYRQGEWF 180
           IE++M E+IA+D   +K   +      LF+ + E YK+ ++E + P    + +Y   E+ 
Sbjct: 121 IEQRMVELIAQDYDVVKHITARHDVVRLFKERGEDYKLRLIEDMGPEVTAMGIYHHQEYV 180

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           D+CRGPHV +T  +K F    +++GAYWRGD+    L RIYGTAW  +++L  Y+  L++
Sbjct: 181 DMCRGPHVPNTRFLKAFRLT-RISGAYWRGDTKNEQLQRIYGTAWADKKQLEAYMQRLQD 239

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQV 299
           +EKRDHRK+ +  DLFH+ E+G G++FWH KGW I+QT+ +Y+RR  ++  Y E+  PQ+
Sbjct: 240 AEKRDHRKIGKAQDLFHLQEEGPGLVFWHPKGWVIWQTIENYIRRVYRNSGYGELRCPQI 299

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           LD  LWQ+SGHWD+Y+ NMF       T  + RT+A+KPMNCPGHV VFN GL SYR+LP
Sbjct: 300 LDVSLWQKSGHWDNYKENMFF------TDSEKRTYAVKPMNCPGHVQVFNQGLHSYRDLP 353

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R  EFG+ +RNEPSG+LHGL+RVRGFTQDD H+FCT+ Q+  E    H   + +Y DFG
Sbjct: 354 IRYGEFGACHRNEPSGALHGLLRVRGFTQDDGHIFCTEAQIEAEVTAFHRQALQVYADFG 413

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           FE I +K++ RP+KR+G    WD AE  ++  L   +      +    L GEGAFYGPK 
Sbjct: 414 FENIQIKIALRPDKRLGDSLSWDKAEAALRAALSACE------VEWQELPGEGAFYGPKI 467

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           EY LKDAIGR WQ GTIQVDF +P R  A YV+  S++ HPVM+HRA+ GS+ERFIGI+I
Sbjct: 468 EYHLKDAIGRTWQLGTIQVDFMMPGRLGAEYVDERSQRRHPVMLHRAIVGSMERFIGILI 527

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E++ G  P WL+P+Q ++  IT +  EYA+++   L +    +  D RNE I YKIREH+
Sbjct: 528 EHYAGIWPTWLAPVQVVIANITDAQYEYAEQVHKALLNQGFRVNIDLRNEKIGYKIREHT 587

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           ++++P +++ GD+E    ++ +R         +S+   +  L  E +
Sbjct: 588 LQRVPYLLVVGDREKENGTVAVRTCSREDLGAMSISAFVERLQTEQV 634


>gi|315646839|ref|ZP_07899954.1| threonyl-tRNA synthetase [Paenibacillus vortex V453]
 gi|315277769|gb|EFU41093.1| threonyl-tRNA synthetase [Paenibacillus vortex V453]
          Length = 635

 Score =  663 bits (1711), Expect = 0.0,   Method: Composition-based stats.
 Identities = 273/645 (42%), Positives = 419/645 (64%), Gaps = 20/645 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +T  DGS K +P   T   +AESI   L K AVA  +NG++ DL+  +  +  + I+
Sbjct: 2   SITVTLADGSKKEYPAQTTMKQIAESIHSGLRKSAVAGKVNGRLVDLNYELCEDAEVRIV 61

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPE--VQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           T +    L + RHS AH+MA+AV+ ++    V + +GP++EDGFYYD D E   S+D+L 
Sbjct: 62  TLDSEDGLNIYRHSTAHLMAQAVKRLYGSKPVYLGVGPVVEDGFYYDMDLEHSISTDDLI 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IE++MQ+I+  D P +++ +S E+A +L     + YK E++  +P +E +++Y QGE+ 
Sbjct: 122 AIEREMQQIVQEDLPIIRREISREEAEQL--FSDDPYKRELILGLPEEEIISVYEQGEFI 179

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ STG++K F KLM VAGAYWRG+S+  ML RIYGTA+  Q +L ++L+ LEE
Sbjct: 180 DLCRGPHLPSTGRIKAF-KLMSVAGAYWRGNSDHKMLQRIYGTAFPKQAQLEEHLFLLEE 238

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           ++KRDHRKL +E+ LF  ++D  G+ F+  KG  I   L  + R  +    Y+E+ TP +
Sbjct: 239 AKKRDHRKLGKELGLFMFSDDAPGMPFFLPKGTIIRNELEQFARELQFHRGYDEVRTPLM 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           +++ LW+ SGHWD Y+ NM+  K       D + + +KPMNCPGH+ V+ + L SYRELP
Sbjct: 299 MNKRLWEMSGHWDHYKDNMYFSKV------DEQEYVMKPMNCPGHMLVYQNSLHSYRELP 352

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +RL+EFG V+R+E SG+L G+MRVR F QDDAH+F   +Q+ +E  ++ + I  +Y+ FG
Sbjct: 353 IRLSEFGQVHRHEYSGALSGMMRVRTFCQDDAHIFVRPDQIHDEIGQVIDFISQVYRVFG 412

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F+  + +LSTRPE  +GSD LW+ AE+ ++ VLD      Q ++   +  G+GAFYGPK 
Sbjct: 413 FDYTI-ELSTRPEDSMGSDELWEQAESSLQEVLD------QQKLPYRINEGDGAFYGPKI 465

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           ++ + D++ R WQCGTIQ+DF  P +F+  Y+   ++K  PV+IHRAVFGSIERFIGI+ 
Sbjct: 466 DFHILDSLKRSWQCGTIQLDFQFPEKFDLSYIAEDNQKHRPVVIHRAVFGSIERFIGILT 525

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E++ G  PLWL+P+  ++  ++   ++++ ++   L+   + +E D RNE + YKIRE  
Sbjct: 526 EHYGGAFPLWLAPVHVMLIPVSDHYIDFSLKVKKRLEHAGVRVEVDIRNEKLGYKIREAG 585

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           + K P   + G+KE +   + +R+ G     + ++ D I  L KE
Sbjct: 586 LLKTPYTFVLGEKEMNSDLVAVRKRGEGELGESAIDDMIARLRKE 630


>gi|313159213|gb|EFR58586.1| threonine--tRNA ligase [Alistipes sp. HGB5]
          Length = 650

 Score =  663 bits (1710), Expect = 0.0,   Method: Composition-based stats.
 Identities = 253/653 (38%), Positives = 392/653 (60%), Gaps = 21/653 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+TFPDGS++ +    T   +AESIS  LA  ++A ++NG   D++ P+  + S++  
Sbjct: 1   MIKITFPDGSVREYAEGTTAYQIAESISPRLAADSLAASVNGATVDMTRPIGEDASVKFY 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
             +D        H+ +H++AEA+++++P ++  IGP IE+GFYYD D   P +  +L +I
Sbjct: 61  KWDDEEGKHAFWHTSSHLLAEALEALYPGIKFGIGPAIENGFYYDVDSPTPITEADLPKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E+KMQE+       +++ +   +A + F  K + YKVE++  +     ++ Y  G + DL
Sbjct: 121 EQKMQELSRNKEQLVRREVPKAEALKTFTEKGDQYKVELISDL-QDGTISFYTNGAFTDL 179

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ +TG +K   KL  VAGAYWRG+    ML+RIYG ++  +  L +YL  +EE++
Sbjct: 180 CRGPHIPNTGYIK-ALKLTSVAGAYWRGNEKNKMLTRIYGISFPKKSMLDEYLVMMEEAK 238

Query: 243 KRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           KRDHRKL ++++LF      G G+  W  KG  +   L  ++R  + +  Y+++ TP + 
Sbjct: 239 KRDHRKLGKDLELFCFSQRVGQGLPLWLPKGAALRDRLEQFLRNVQKEYGYQQVITPHIG 298

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ L+  SGH+  Y  + F       T  +   + LKPMNCP H  ++    +SY+ELPV
Sbjct: 299 NKELYVTSGHYAKYGKDSFQ---PIHTPIEGEEYLLKPMNCPHHCEIYRSKPRSYKELPV 355

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLAEFG+VYR E SG LHGL RVRGFTQDDAH+F   +Q+  E  ++ ++++ I+K   F
Sbjct: 356 RLAEFGTVYRYEQSGELHGLTRVRGFTQDDAHLFVRPDQLLEEFERVIDIVLYIFKTLKF 415

Query: 421 EKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           +    ++S R        +GSD  W+ AE+ +    +      +  +NT V  GE AFYG
Sbjct: 416 DNYTAQISLRDPNNKEKYIGSDENWEKAESAIMQAAE------EKGLNTVVEYGEAAFYG 469

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK ++++KDAIGR WQ GTIQVD+NLP RF+  Y  +  +   P+MIHRA FGS+ERF+ 
Sbjct: 470 PKLDFMVKDAIGRKWQLGTIQVDYNLPERFDLTYKGADDKLHRPIMIHRAPFGSMERFVA 529

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +++E+  G  PLWLSP Q +V  I+    +YAQ++A  L    +  E D RNE I  KIR
Sbjct: 530 VLLEHTGGKFPLWLSPQQVVVLPISEKFNDYAQQVAEYLNRSDVRTEVDDRNEKIGRKIR 589

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL---DAIPILTKESL 646
           ++ +K+IP ++I G+KE +E  + +R  G     +++L    D I  L KE +
Sbjct: 590 DNELKRIPYLLIVGEKEEAEGLVSVRAQGEGDKGQMTLEGFRDFIAGLVKEEI 642


>gi|159903594|ref|YP_001550938.1| threonyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
 gi|238687108|sp|A9BAX2|SYT_PROM4 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|159888770|gb|ABX08984.1| Threonyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
          Length = 638

 Score =  663 bits (1710), Expect = 0.0,   Method: Composition-based stats.
 Identities = 301/639 (47%), Positives = 433/639 (67%), Gaps = 15/639 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDG+ K F    T +D+A  I   LA  A+A  +N  + D+S P+  +  I+IIT +
Sbjct: 4   ITLPDGTKKEFSGSITIADIASDIGPGLASAAIAGKVNQDLVDISIPIDYDAEIKIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   + +IRHS AH++  AV+ ++P+ ++AIGPIIEDGFYYD    + F+ ++LA+IE++
Sbjct: 64  DKEGVEIIRHSFAHLIGHAVKQLYPDAKMAIGPIIEDGFYYDISYSKTFTPEDLARIEER 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           ++++I  +   + + +S +KA   F+ + E YKVEI+ +IP  E + LY+  E+ D+CRG
Sbjct: 124 IKDLIKLNYDVVVEIVSRDKALNTFKDRNEPYKVEIINNIPEGETIKLYKHQEYIDMCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +T  +  F KLM+V+GAYWRGDS+  ML RIYGTAW  +++L  Y+  LEE+EKRD
Sbjct: 184 PHVPNTKHLNSF-KLMRVSGAYWRGDSDNEMLQRIYGTAWANKKDLKAYINRLEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDY-EEINTPQVLDQHL 304
           HRK+ ++MDLFH  E+  G++FWH  GW I+Q L  Y+R  + ++Y +E+ TPQ +D+ L
Sbjct: 243 HRKIGKKMDLFHTQEEAPGMVFWHPNGWSIYQVLEKYIRDVLNNNYYQEVKTPQAVDRSL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHWD ++ +MF       T  + R +A+KPMNCP H+ +FN GLKSYR+LP+RLAE
Sbjct: 303 WEKSGHWDKFKDDMFT------TTSENREYAIKPMNCPCHIQIFNQGLKSYRDLPIRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNEPSG+LHGLMRVR F QDDAH+FCT+ Q+ +E     +L+  +YK FGF +I+
Sbjct: 357 FGSCHRNEPSGALHGLMRVRNFVQDDAHIFCTEAQVQSEVSNFIDLVFEVYKSFGFNEII 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +KLSTRP+KRVGS+ +WD +E  +   L++        ++   L GEGAFYGPK E+ LK
Sbjct: 417 IKLSTRPKKRVGSEFIWDKSEKALSEALNS------KGLDWSYLPGEGAFYGPKIEFSLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D + R WQCGTIQVDF++PSR  A Y++   EK  PVM+HRA+ GS ERFIGI+IEN+ G
Sbjct: 471 DCLNRVWQCGTIQVDFSMPSRLEAKYIDEKGEKKEPVMLHRAILGSFERFIGILIENYAG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
           N P+WL+P+Q IV  IT       + +   L +    ++ D RNE I +KIREH++ +IP
Sbjct: 531 NFPVWLAPVQIIVMGITDRNSSCCESLTTKLINKGYRVKLDLRNEKIGFKIREHTLNRIP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            ++I GDKE  E  I +R         +SL + + IL K
Sbjct: 591 YLLIIGDKEEKEGKIAVRTREGNDMGSISLEEFLVILNK 629


>gi|301156314|emb|CBW15785.1| threonyl-tRNA synthetase [Haemophilus parainfluenzae T3T1]
          Length = 643

 Score =  663 bits (1710), Expect = 0.0,   Method: Composition-based stats.
 Identities = 294/648 (45%), Positives = 429/648 (66%), Gaps = 16/648 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS + F    +  +VA+ I   LAK  +A  +NG+  D  D +  + ++EIIT +
Sbjct: 4   ITLPDGSKREFDRPVSVLEVAQDIGAGLAKATIAGRVNGERRDACDIINEDANLEIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ ++P+V++AIGP IE+GFYYD D ++  + +++  IEK+
Sbjct: 64  DEDGLEIIRHSCAHLLGHAIKQLFPDVKMAIGPTIENGFYYDVDLDRSLTQEDIDAIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K  +S ++AR+ FE + E YK+ IL E+I       LY   E+ D+CR
Sbjct: 124 MLELAKTNYDVIKTPVSWQEARDTFEKRGEPYKMAILDENIERTATPALYHHEEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +    + F KLMKVAGAYWRGDS   ML RIYGTAW  +++L +YL  LEE+ KR
Sbjct: 184 GPHVPNMRFCQHF-KLMKVAGAYWRGDSKNKMLQRIYGTAWADKKQLAEYLTRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ + +DL+H+ E+  G++FWH  GW IF+ L +++R K+K+ DY+E+  P ++D+ 
Sbjct: 243 DHRKIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW +Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWQNYGDLMFT------TQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+ +E      ++  IY  FGF+ I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQIESEVTSCIKMVYDIYSTFGFQNI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPEKR+G+D +WD      +         + + +   +  GEGAFYGPK E+ L
Sbjct: 417 QVKLSTRPEKRIGADDMWD------RAEAGLAAALAHNGLEYEIQEGEGAFYGPKIEFAL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D + R+WQCGTIQ+DF LP R NA YV   +++  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 RDCLDREWQCGTIQLDFALPGRLNASYVAEDNDRRTPVMIHRAILGSIERFIGIITEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+QA+V  IT S  +Y Q++   L    L ++ D RNE + +KIREH+++++
Sbjct: 531 GFFPAWLAPVQAVVMNITDSQADYVQKVVKQLSDAGLRVKADLRNEKVGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           P +++CGDKE +E  + +R          ++ +   IL  +    + +
Sbjct: 591 PYMLVCGDKEIAEGKVAVRTRKGADLGTFTIEEFAEILKSQVRQRELK 638


>gi|254828206|ref|ZP_05232893.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
 gi|258600595|gb|EEW13920.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
          Length = 640

 Score =  663 bits (1710), Expect = 0.0,   Method: Composition-based stats.
 Identities = 263/648 (40%), Positives = 407/648 (62%), Gaps = 20/648 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K+TFPDG++K F    + +D+A SIS  L KKA+A  +NG++ DL  P+  +G+IEI+T
Sbjct: 1   MKITFPDGAVKEFEPGVSTADIAASISPGLKKKALAGKLNGELLDLVTPIHEDGAIEIVT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+   +L ++RHS AH+MA+A++ ++P+V+  +GP IE GFYYD D E   S + L +IE
Sbjct: 61  PDHEDALGILRHSTAHLMAQALKRLYPDVKFGVGPAIESGFYYDIDTEAVISDESLVEIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+MQ+I+  + P  ++ +S E+A + F++  + YK+E++E+IP  E VT+Y QGE+FDLC
Sbjct: 121 KEMQKIVRENVPIEREVVSREEAIKRFKAIGDQYKLELIEAIPEDETVTIYTQGEFFDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RG HV STG+++ F KL+ VAGAYWRGDSN  ML RIYGTA+  +  L +++   +E+++
Sbjct: 181 RGVHVPSTGKIQVF-KLLSVAGAYWRGDSNNKMLQRIYGTAFFDKNGLKEFIQMQKEAKE 239

Query: 244 RDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           RDHRKL +E++LF  + +   G+  W  KG  I + +  Y+  K +   Y  + TP + +
Sbjct: 240 RDHRKLGKELELFTNSIEVGQGLPLWLPKGATIRRVIERYIVDKEERLGYNHVYTPIMAN 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             L++ SGHWD Y  +MF     D+         L+PMNCP H+ ++ + + SYRELP+R
Sbjct: 300 VELYKTSGHWDHYHEDMFPTMKMDN-----EELVLRPMNCPHHMMIYKNDIHSYRELPIR 354

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AE G ++R E SG+L GL RVRG T +DAHVF   +Q+ +E  ++  LI+ +YKDF   
Sbjct: 355 IAELGMMHRYEMSGALSGLQRVRGMTLNDAHVFVRPDQIKDEFKRVVELILEVYKDFDIT 414

Query: 422 KIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
               +LS R      K    DA+W+ A+ ++K  +D ++      ++     GE AFYGP
Sbjct: 415 DYSFRLSYRDPKNTEKYFDDDAMWEKAQAMLKSAMDEME------MDYFEAEGEAAFYGP 468

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  +K AIG++    T+Q+DF LP RF+  Y+    EK  PV+IHR V  ++ERF+  
Sbjct: 469 KLDVQVKTAIGKEETLSTVQLDFLLPERFDLTYIGEDGEKHRPVVIHRGVVSTMERFVAY 528

Query: 538 MIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +IE +KG  P WL+P+Q  +  +   + ++YA+ + + L+   L  E D RNE + YKIR
Sbjct: 529 LIEEYKGAFPTWLAPVQMELIPVNADAHLDYAKGVQDKLQRAGLRAEVDDRNEKLGYKIR 588

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           E   KKIP  ++ GD+E    S+ +RR+GS  ++ + L   I  +  E
Sbjct: 589 EAQTKKIPYALVLGDQEVEAGSVNVRRYGSKDSETMDLDAFIAQVVAE 636


>gi|329927796|ref|ZP_08281857.1| threonine--tRNA ligase [Paenibacillus sp. HGF5]
 gi|328938197|gb|EGG34592.1| threonine--tRNA ligase [Paenibacillus sp. HGF5]
          Length = 636

 Score =  663 bits (1710), Expect = 0.0,   Method: Composition-based stats.
 Identities = 267/645 (41%), Positives = 413/645 (64%), Gaps = 20/645 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +T  DGS K +P   T   +AESI   L K AVA  ++GK+ DL+  +  +  + II
Sbjct: 2   SIVVTLQDGSKKEYPAQTTMIQIAESIHSGLKKNAVAAKVDGKLVDLNHELREDAEVSII 61

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPE--VQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           T +    L V RHS AH+MA+AV+ ++    V + +GP+IEDGFYYD D     ++D+L 
Sbjct: 62  TLDSEDGLYVYRHSTAHLMAQAVKRLYGSESVHLGVGPVIEDGFYYDMDLGHSITADDLI 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IE++M +I+  D P L++ +  ++A  +   + + YK E++  +P  E +++Y QGE+ 
Sbjct: 122 AIEREMLKIVQEDLPILRKEVGRKEAERI--FQDDPYKTELIRELPEDEVISVYEQGEFV 179

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ STG++K F KLM VAGAYWRG+S+  ML RIYGTA+  + +L ++L  LEE
Sbjct: 180 DLCRGPHLPSTGRIKAF-KLMSVAGAYWRGNSDNKMLQRIYGTAFPKKSQLDEHLLLLEE 238

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           ++KRDHRKL +E+ LF  +E+  G+ F+   G  I   L  + R  +   DY+E+ TP +
Sbjct: 239 AKKRDHRKLGKELGLFMFSEEAPGMPFFLPNGMIIRNELEQFARGLQFHRDYDEVRTPLM 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           +++ LW+ SGHWD Y+ NM+  +       D   +ALKPMNCPGH+ V+ + L SYRELP
Sbjct: 299 MNKRLWEMSGHWDHYKDNMYFTQV------DETEYALKPMNCPGHMLVYKNSLHSYRELP 352

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R++EFG V+R+E SG+L+G+MRVR F QDDAH+F   +Q+  E  ++ + I  +Y+ FG
Sbjct: 353 IRISEFGQVHRHEFSGALNGMMRVRTFCQDDAHIFVRPDQIQEEIKQVIDFISQVYQVFG 412

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           FE  + +LSTRPE  +GS+ LW+ AE+ ++ VLD +       +   +  G+GAFYGPK 
Sbjct: 413 FEYTI-ELSTRPEDSMGSEELWEQAESSLQQVLDQMG------LPYRINEGDGAFYGPKI 465

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           ++ + D++ R WQCGTIQ+DF  P +F+  Y+   ++K  PV+IHRAVFGSIERFIGI+ 
Sbjct: 466 DFHILDSLKRSWQCGTIQLDFQFPEKFDLSYIGEDNQKHRPVVIHRAVFGSIERFIGILT 525

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E++ G  P+WL+P+Q ++  ++   ++Y+ ++   L++  + +  D RNE + YKIRE  
Sbjct: 526 EHYGGAFPMWLAPVQVMIIPVSDHYIDYSLKVKKRLENAGIRVNVDVRNEKLGYKIREAG 585

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           + K P  ++ G+KE     + +R+ G     ++++   I  L  E
Sbjct: 586 LLKTPYTLVLGEKEMDSDHVSVRKRGEGELGEIAIDQVIERLRNE 630


>gi|228939521|ref|ZP_04102109.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228972374|ref|ZP_04132985.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228978988|ref|ZP_04139352.1| Threonyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228780699|gb|EEM28913.1| Threonyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228787391|gb|EEM35359.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228820221|gb|EEM66258.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|326940068|gb|AEA15964.1| threonyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 640

 Score =  663 bits (1710), Expect = 0.0,   Method: Composition-based stats.
 Identities = 275/644 (42%), Positives = 431/644 (66%), Gaps = 17/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEII 62
            I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N  + DL   + E   +EII
Sbjct: 5   MIEIKFPDGSVKEFGKGITLEEIAGSISSSLKKKAVAGKVNDGLYDLRRNIEENAEVEII 64

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +    + + RHS AHI+A++V+ ++ ++ + +GP+IE+GFYYD D     + ++L +I
Sbjct: 65  TIDSNEGVEIARHSAAHILAQSVKRMYGDINLGVGPVIENGFYYDMDFPSSVNVEDLRKI 124

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M++II  +    +  +S E+A +LF+   +  K+E+LE+IP+ E+VTLY+QGE+ DL
Sbjct: 125 EKEMKKIINENIKIERVEVSREEAAKLFQEMNDRLKLELLEAIPSGESVTLYKQGEFVDL 184

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ STG +K F     V+GAYWRGDSN  +L RIYG A+++Q+EL +YL+F+EE+ 
Sbjct: 185 CRGPHLPSTGYLKAFQLTH-VSGAYWRGDSNNQVLQRIYGVAFSSQKELEEYLHFVEEAA 243

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KR+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R  + + +Y+E+ TP +++
Sbjct: 244 KRNHRKLGNELELFMFSEEAPGMPFYLPKGQMIRNELEAFLREIQKEYNYQEVRTPFMMN 303

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           Q +W++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R
Sbjct: 304 QEVWEKSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIR 357

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           + EFG V+R+E SG+L+GL+RVR F QDDAH+F T +Q+ +E   +   I  +YK FGFE
Sbjct: 358 MCEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPKQIEDEIKSVMAQIDYVYKTFGFE 417

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPE  +G D LW+ AE  ++ VL ++           +  G+GAFYGPK ++
Sbjct: 418 Y-EVELSTRPEDSMGDDKLWEQAEAALENVLQSLNY------KYRLNEGDGAFYGPKIDF 470

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+ R  QCGTIQ+DF +P +F+  Y++ +++K  PV+IHRAV GS++RF+ I+IE+
Sbjct: 471 HIKDALNRSHQCGTIQLDFQMPEKFDLNYIDENNDKKRPVVIHRAVLGSLDRFLAILIEH 530

Query: 542 FKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           F G  P W++P+Q  V  ++++   +YA EI   L    + +E D R+E + YKIRE  +
Sbjct: 531 FGGAFPAWVAPVQVKVIPVSNAVHEQYANEITLKLAQAGVRVEQDARDEKLGYKIREAQM 590

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +K+P +++ GDKE    ++ +R++G   ++ V+L   +  + +E
Sbjct: 591 QKVPYVLVIGDKEMENGAVNVRKYGEEKSEVVALDVFVASIEEE 634


>gi|224499783|ref|ZP_03668132.1| threonyl-tRNA synthetase [Listeria monocytogenes Finland 1988]
          Length = 640

 Score =  663 bits (1710), Expect = 0.0,   Method: Composition-based stats.
 Identities = 263/648 (40%), Positives = 407/648 (62%), Gaps = 20/648 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K+TFPDG++K F    + +D+A SIS  L KKA+A  +NG++ DL  P+  +G+IEI+T
Sbjct: 1   MKITFPDGAVKEFKPGVSTADIAASISPGLKKKALAGKLNGELLDLVTPIHEDGAIEIVT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+   +L ++RHS AH+MA+A++ ++P+V+  +GP IE GFYYD D E   S + L +IE
Sbjct: 61  PDHEDALGILRHSTAHLMAQALKRLYPDVKFGVGPAIESGFYYDIDTEAVISDESLVEIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+MQ+I+  + P  ++ +S E+A + F++  + YK+E++E+IP  E VT+Y QGE+FDLC
Sbjct: 121 KEMQKIVRENVPIEREVVSREEAIKRFKAIGDQYKLELIEAIPEDETVTIYTQGEFFDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RG HV STG+++ F KL+ VAGAYWRGDSN  ML RIYGTA+  +  L +++   +E+++
Sbjct: 181 RGVHVPSTGKIQVF-KLLSVAGAYWRGDSNNKMLQRIYGTAFFDKNGLKEFIQMQKEAKE 239

Query: 244 RDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           RDHRKL +E++LF  + +   G+  W  KG  I + +  Y+  K +   Y  + TP + +
Sbjct: 240 RDHRKLGKELELFTNSIEVGQGLPLWLPKGATIRRVIERYIVDKEERLGYNHVYTPIMAN 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             L++ SGHWD Y  +MF     D+         L+PMNCP H+ ++ + + SYRELP+R
Sbjct: 300 VELYKTSGHWDHYHEDMFPTMKMDN-----EELVLRPMNCPHHMMIYKNDIHSYRELPIR 354

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AE G ++R E SG+L GL RVRG T +DAHVF   +Q+ +E  ++  LI+ +YKDF   
Sbjct: 355 IAELGMMHRYEMSGALSGLQRVRGMTLNDAHVFVRPDQIKDEFKRVVELILEVYKDFDIT 414

Query: 422 KIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
               +LS R      K    DA+W+ A+ ++K  +D ++      ++     GE AFYGP
Sbjct: 415 DYSFRLSYRDPKNTEKYFDDDAMWEKAQAMLKSAMDEME------MDYFEAEGEAAFYGP 468

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  +K AIG++    T+Q+DF LP RF+  Y+    EK  PV+IHR V  ++ERF+  
Sbjct: 469 KLDVQVKTAIGKEETLSTVQLDFLLPERFDLTYIGEDGEKHRPVVIHRGVVSTMERFVAY 528

Query: 538 MIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +IE +KG  P WL+P+Q  +  +   + ++YA+ + + L+   L  E D RNE + YKIR
Sbjct: 529 LIEEYKGAFPTWLAPVQMEIIPVNADAHLDYAKGVQDKLQRAGLRAEVDDRNEKLGYKIR 588

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           E   KKIP  ++ GD+E    S+ +RR+GS  ++ + L   I  +  E
Sbjct: 589 EAQTKKIPYALVLGDQEVEAGSVNVRRYGSKDSETMDLDAFIAQVVAE 636


>gi|229011636|ref|ZP_04168819.1| Threonyl-tRNA synthetase [Bacillus mycoides DSM 2048]
 gi|228749594|gb|EEL99436.1| Threonyl-tRNA synthetase [Bacillus mycoides DSM 2048]
          Length = 639

 Score =  663 bits (1709), Expect = 0.0,   Method: Composition-based stats.
 Identities = 279/644 (43%), Positives = 430/644 (66%), Gaps = 17/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEII 62
            I++ FPDGS+K F    T  ++A +IS SL KKAVA  +N +  DL   + E   +EII
Sbjct: 5   MIEIKFPDGSVKEFVKGITLEEIAGAISSSLKKKAVAGKVNDQSFDLRRNIEESAKVEII 64

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +    + + RHS AHI+A+AV+ I+ +V + +GP+IE+GFYYD D     + ++L +I
Sbjct: 65  TMDSDEGVKIARHSAAHILAQAVKRIYGDVNLGVGPVIENGFYYDMDLPSSVNVEDLPKI 124

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M+ II  +    +  +S E+A+ELF+   ++ K+E+LE+IP  E+VTLY+QGE+ DL
Sbjct: 125 EKEMKNIINENVKIERVEVSREEAKELFQEMNDSLKLELLEAIPNGESVTLYKQGEFVDL 184

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ STG +K F     V+GAYWRGDSN  +L RIYG A+++QQ+L +YL+F+EE+ 
Sbjct: 185 CRGPHLPSTGYLKAFQLTH-VSGAYWRGDSNNQVLQRIYGVAFSSQQKLEEYLHFVEEAA 243

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KR+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R  + + +Y+E+ TP +++
Sbjct: 244 KRNHRKLGSELELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQNEYNYQEVRTPFMMN 303

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           Q LW++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R
Sbjct: 304 QELWEKSGHWGHYKDNMYFSEV------DHKSFALKPMNCPGHMLMFKNKLHSYRELPIR 357

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           + EFG V+R+E SG+L+GL+RVR F QDDAH+F T EQ+ +E   +   I  +YK FGFE
Sbjct: 358 MCEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPEQIEDEIKSVLAQIDYVYKTFGFE 417

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPE  +G D LW+ AE  ++ VL ++           +  G+GAFYGPK ++
Sbjct: 418 Y-EVELSTRPEDSMGDDKLWEQAELALENVLQSLNY------KYRLNEGDGAFYGPKIDF 470

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+ R  QCGT+Q+DF +P +F+  Y++ ++EK  PV+IHRAV GS++RF+ I+IE+
Sbjct: 471 HIKDALNRSHQCGTVQLDFQMPEKFDLNYIDENNEKRRPVVIHRAVLGSLDRFLAILIEH 530

Query: 542 FKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           F G  P W++P+Q  V  ++++   +Y   IA+ L    + +E D R+E + YKIRE  +
Sbjct: 531 FGGAFPAWVAPVQVKVIPVSNAVHEQYINRIADKLAQAGIRVERDIRDEKLGYKIREAQM 590

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +K+P +++ GDKE    ++ +R++G   ++ V L   +  + +E
Sbjct: 591 QKVPYVLVIGDKEMESEAVNVRKYGEEKSEVVELDAFVESMKEE 634


>gi|164685973|ref|ZP_01946163.2| threonyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
 gi|212218739|ref|YP_002305526.1| threonyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
 gi|164601497|gb|EAX33218.2| threonyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
 gi|212013001|gb|ACJ20381.1| threonyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
          Length = 660

 Score =  663 bits (1709), Expect = 0.0,   Method: Composition-based stats.
 Identities = 296/646 (45%), Positives = 427/646 (66%), Gaps = 18/646 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP    +  PDGS+K F    +   VAESI  SLAK A+A  I+  + D+S  + ++ S+
Sbjct: 10  MP---TIQLPDGSVKQFSKPVSVQAVAESIGTSLAKAALAGKIDDHLVDVSFIIDKDVSL 66

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +DP  L VIRHS AH++A AV+ ++P+ +V IGP++EDGFYYDF  E+ F+ ++L
Sbjct: 67  RIITEKDPEGLEVIRHSAAHLLAHAVKELFPKAEVTIGPVVEDGFYYDFAFERSFTPEDL 126

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IE+KM+ +   D    ++ LS ++A  LF+   E YKVEI+  IP +E +T Y+QG++
Sbjct: 127 EKIEEKMRSLAKADLAVERRVLSRDEALTLFKKMGERYKVEIIRDIPKEEILTAYQQGDF 186

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV  TG +K F KL K+AGAYW+GDSN  ML RIYGTAW   + L  YLY LE
Sbjct: 187 IDLCRGPHVPRTGMLKAF-KLTKLAGAYWQGDSNNEMLQRIYGTAWADTKALKAYLYRLE 245

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQ 298
           E+EKRDHR LA++MDLFH   +  G +FWH  GW I   +  Y+R    K  Y+E++TPQ
Sbjct: 246 EAEKRDHRLLAKKMDLFHFQPESPGNVFWHPNGWSIILQMREYIRHITHKYGYQEVHTPQ 305

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D  LW +SGH + +  ++F++        + + + +KPM+CP HV +FN G+KSYR+L
Sbjct: 306 LIDASLWDKSGHLEKFGDDIFSL------PLEPQQYVIKPMSCPAHVQIFNQGVKSYRDL 359

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R AEFG+ +RNEPSG+LHGLMR+RGF QDDAH+FCT++Q+ +E     + +  +Y DF
Sbjct: 360 PLRYAEFGACHRNEPSGTLHGLMRLRGFVQDDAHIFCTEDQIQSEVSAFIDQLHEVYADF 419

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF +++ KLSTRPEKRVGSD +W  AE  +    +      +  +   +L GEGAFYGPK
Sbjct: 420 GFTEVIHKLSTRPEKRVGSDEVWTKAEQALAEAFN------RKGVEWDILPGEGAFYGPK 473

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ L+D +GR WQCGT+QVDF++P R  A Y+     K  PVMIHRA+ GS ERF+GI+
Sbjct: 474 IEFSLRDCLGRIWQCGTVQVDFSVPERLGAHYIAEDGSKKPPVMIHRAILGSFERFLGIL 533

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           +E   G LPLWL+P+Q +V  IT    +Y  +    L++  +   +D RNE I +KIREH
Sbjct: 534 LEESAGKLPLWLAPVQVVVMNITDRQADYVGQTVENLQNLGIRAHSDLRNEKIGFKIREH 593

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +I ++P +++ GD+E +++++ +R      +  ++L +    L  E
Sbjct: 594 TIARVPYLVVIGDREVADKTLSVRALEDEASTTITLEEFARQLKAE 639


>gi|28199783|ref|NP_780097.1| threonyl-tRNA synthetase [Xylella fastidiosa Temecula1]
 gi|182682533|ref|YP_001830693.1| threonyl-tRNA synthetase [Xylella fastidiosa M23]
 gi|32130161|sp|Q87AB2|SYT_XYLFT RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|238691115|sp|B2I9P8|SYT_XYLF2 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|28057904|gb|AAO29746.1| threonyl-tRNA synthetase [Xylella fastidiosa Temecula1]
 gi|182632643|gb|ACB93419.1| threonyl-tRNA synthetase [Xylella fastidiosa M23]
 gi|307578811|gb|ADN62780.1| threonyl-tRNA synthetase [Xylella fastidiosa subsp. fastidiosa
           GB514]
          Length = 635

 Score =  663 bits (1709), Expect = 0.0,   Method: Composition-based stats.
 Identities = 293/647 (45%), Positives = 424/647 (65%), Gaps = 17/647 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAING-KVCDLSDPVREGSI-EI 61
            I +T PDGS + F    +   VA +I   LAK  +A  I+G  + D SD +   +I  I
Sbjct: 1   MITITLPDGSRREFEGPVSVMQVAHAIGPGLAKATIAGQIDGGHLVDASDLIEHDAILRI 60

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           ITPED  +L +IRHSCAH++  AV+ ++PE ++ IGP+I DGFYYD   ++PF+ ++LA 
Sbjct: 61  ITPEDQEALEIIRHSCAHLVGHAVKQLYPEAKMVIGPVIADGFYYDIYSKRPFTPEDLAA 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESI-PAKENVTLYRQGEWF 180
           IE++M E+IA+D   +K   +      LF+ + E YK+ ++E + P    + +Y   E+ 
Sbjct: 121 IEQRMVELIAQDYDVVKHITARHDVVRLFKERGEDYKLRLIEDMGPEVTAMGIYHHQEYV 180

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           D+CRGPHV +T  +K F    +++GAYWRG++    L RIYGTAW  +++L  Y+  L++
Sbjct: 181 DMCRGPHVPNTRFLKAFRLT-RISGAYWRGNTKNEQLQRIYGTAWADKKQLEAYMQRLQD 239

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQV 299
           +EKRDHRK+ +  DLFH+ E+G G++FWH KGW I+QT+ +Y+RR  ++  Y E+  PQ+
Sbjct: 240 AEKRDHRKIGKAQDLFHLQEEGPGLVFWHPKGWVIWQTIENYIRRVYRNSGYGELRCPQI 299

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           LD  LWQ+SGHWD+Y+ NMF       T  + RT+A+KPMNCPGHV VFN GL SYR+LP
Sbjct: 300 LDVSLWQKSGHWDNYKENMFF------TDSEKRTYAVKPMNCPGHVQVFNQGLHSYRDLP 353

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R  EFG+ +RNEPSG+LHGL+RVRGFTQDD H+FCT+ Q+  E    H   + +Y DFG
Sbjct: 354 IRYGEFGACHRNEPSGALHGLLRVRGFTQDDGHIFCTEAQIEAEVTAFHRQALQVYADFG 413

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           FE I +K++ RP+KR+G    WD AE  ++  L   +      +    L GEGAFYGPK 
Sbjct: 414 FENIQIKIALRPDKRLGDSLSWDKAEAALRAALSACE------VEWQELPGEGAFYGPKI 467

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           EY LKDAIGR WQ GTIQVDF +P+R  A YV+  S++ HPVM+HRA+ GS+ERFIGI+I
Sbjct: 468 EYHLKDAIGRTWQLGTIQVDFMMPARLGAEYVDERSQRRHPVMLHRAIVGSMERFIGILI 527

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E++ G  P WL+P+Q ++  IT +  EYA+++   L +    +  D RNE I YKIREH+
Sbjct: 528 EHYAGIWPTWLAPVQVVIANITDAQYEYAEQVHKALLNQGFRVNIDLRNEKIGYKIREHT 587

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           ++++P +++ GD+E    ++ +R         +S+   +  L  E +
Sbjct: 588 LQRVPYLLVVGDREKENGTVAVRTCSREDLGAMSISTFVERLQTEQV 634


>gi|46907789|ref|YP_014178.1| threonyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|47093096|ref|ZP_00230873.1| threonyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
 gi|217964294|ref|YP_002349972.1| threonyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|226224160|ref|YP_002758267.1| threonyl-tRNA synthetase [Listeria monocytogenes Clip81459]
 gi|254824382|ref|ZP_05229383.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
 gi|254852182|ref|ZP_05241530.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|254931499|ref|ZP_05264858.1| threonyl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|255520160|ref|ZP_05387397.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL J1-175]
 gi|290893960|ref|ZP_06556936.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL J2-071]
 gi|300764775|ref|ZP_07074765.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
 gi|67461796|sp|Q71ZA9|SYT_LISMF RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|254783526|sp|B8DHI9|SYT_LISMH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|259516560|sp|C1KVK6|SYT_LISMC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|46881058|gb|AAT04355.1| threonyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|47018536|gb|EAL09292.1| threonyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
 gi|217333564|gb|ACK39358.1| threonyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|225876622|emb|CAS05331.1| threonyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           CLIP 80459]
 gi|258605487|gb|EEW18095.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|290556498|gb|EFD90036.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL J2-071]
 gi|293583051|gb|EFF95083.1| threonyl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|293593617|gb|EFG01378.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
 gi|300514451|gb|EFK41508.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
 gi|307571140|emb|CAR84319.1| thrS [Listeria monocytogenes L99]
 gi|313608610|gb|EFR84472.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL F2-208]
 gi|328465594|gb|EGF36823.1| threonyl-tRNA synthetase [Listeria monocytogenes 1816]
 gi|332312001|gb|EGJ25096.1| Threonyl-tRNA synthetase [Listeria monocytogenes str. Scott A]
          Length = 640

 Score =  663 bits (1709), Expect = 0.0,   Method: Composition-based stats.
 Identities = 264/648 (40%), Positives = 408/648 (62%), Gaps = 20/648 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K+TFPDG++K F    + +D+A SIS  L KKA+A  +NG++ DL  P+  +G+IEI+T
Sbjct: 1   MKITFPDGAVKEFEPGVSTADIAASISPGLKKKALAGKLNGELLDLVTPIHEDGAIEIVT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+   +L ++RHS AH+MA+A++ ++P+V+  +GP IE GFYYD D E   S + L +IE
Sbjct: 61  PDHEDALGILRHSTAHLMAQALKRLYPDVKFGVGPAIESGFYYDIDTEAVISDESLVEIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+MQ+I+  + P  ++ +S E+A + F++  + YK+E++E+IP  E VT+Y QGE+FDLC
Sbjct: 121 KEMQKIVRENVPIEREVVSREEAIKRFKAIGDQYKLELIEAIPEDETVTIYTQGEFFDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RG HV STG+++ F KL+ VAGAYWRGDSN  ML RIYGTA+  +  L +++   +E+++
Sbjct: 181 RGVHVPSTGKIQVF-KLLSVAGAYWRGDSNNKMLQRIYGTAFFDKNGLKEFIQMQKEAKE 239

Query: 244 RDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           RDHRKL +E+DLF  + +   G+  W  KG  I + +  Y+  K +   Y  + TP + +
Sbjct: 240 RDHRKLGKELDLFANSIEVGQGLPLWLPKGATIRRVIERYIVDKEERLGYNHVYTPIMAN 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             L++ SGHWD Y  +MF     D+         L+PMNCP H+ ++ + + SYRELP+R
Sbjct: 300 VELYKTSGHWDHYHEDMFPTMKMDN-----EELVLRPMNCPHHMMIYKNDIHSYRELPIR 354

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AE G ++R E SG+L GL RVRG T +DAHVF   +Q+ +E  ++  LI+ +YKDF  +
Sbjct: 355 IAELGMMHRYEMSGALSGLQRVRGMTLNDAHVFVRPDQIKDEFKRVVELILEVYKDFDIK 414

Query: 422 KIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
               +LS R      K    DA+W+ A+ ++K  +D ++      ++     GE AFYGP
Sbjct: 415 DYSFRLSYRDPKNTEKYFDDDAMWEKAQAMLKSAMDEME------MDYFEAEGEAAFYGP 468

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  +K AIG++    T+Q+DF LP RF+  Y+    EK  PV+IHR V  ++ERF+  
Sbjct: 469 KLDVQVKTAIGKEETLSTVQLDFLLPERFDLTYIGEDGEKHRPVVIHRGVVSTMERFVAY 528

Query: 538 MIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +IE +KG  P WL+P+Q  +  +   + ++YA+ + + L+   L  E D RNE + YKIR
Sbjct: 529 LIEEYKGAFPTWLAPVQMELIPVNADAHLDYAKGVQDKLQRAGLRAEVDDRNEKLGYKIR 588

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           E   KKIP  ++ GD+E    S+ +RR+GS  ++ + L   I  +  E
Sbjct: 589 EAQTKKIPYALVLGDQEVEAGSVNVRRYGSKDSETMDLDAFIAQVVAE 636


>gi|169829542|ref|YP_001699700.1| threonyl-tRNA synthetase 1 [Lysinibacillus sphaericus C3-41]
 gi|168994030|gb|ACA41570.1| Threonyl-tRNA synthetase 1 [Lysinibacillus sphaericus C3-41]
          Length = 643

 Score =  663 bits (1709), Expect = 0.0,   Method: Composition-based stats.
 Identities = 260/655 (39%), Positives = 411/655 (62%), Gaps = 20/655 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           M   IKLTFPDG++K F    +  DVA SIS  L KKA A  IN  + DL  P+  + +I
Sbjct: 1   MSEMIKLTFPDGAVKEFVKGTSTDDVALSISPGLRKKAYAGKINDVLVDLKTPIEEDATI 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D  +L ++RHS AH+ A+A++ ++P+V++ IGP+I+ GFYYD D   P ++++L
Sbjct: 61  AIITQDDEEALEILRHSTAHLTAQAIKRLFPDVKLGIGPVIDGGFYYDIDSPTPITAEDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEK+M++IIA +    ++ +S  +A+ ++E   + YK+E+LE+IPA E V++Y QGE+
Sbjct: 121 PAIEKEMKKIIAENLEVERKNVSRAEAQAMYEEIGDEYKLELLEAIPADEQVSIYYQGEF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRG HV STG++++F KL+ +AGAYWRG+S+  ML RIYGTA+  ++EL  +L  LE
Sbjct: 181 FDLCRGIHVPSTGKLREF-KLLSLAGAYWRGNSDNKMLQRIYGTAFFKKEELKHHLQMLE 239

Query: 240 ESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTP 297
           E+++RDHRK+ +E++LF  ++    G+  W   G  I + +  Y+  +++   Y+ + TP
Sbjct: 240 EAKERDHRKIGKELELFTTSQKVGQGLPLWLPNGATIRRVIERYIVDKELSLGYKHVYTP 299

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +  + L+Q SGHWD Y+ ++F     D+      T  ++PMNCP H+ V+ + + SYR 
Sbjct: 300 VLGSKELYQTSGHWDHYQDSIFPPMEMDN-----ETLIMRPMNCPHHMMVYKNSMHSYRS 354

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AE G+++R E SG++ GL RVRG T +DAH+F   +Q+  E  K+  LI+ +YKD
Sbjct: 355 LPLRIAELGTMHRYEMSGAVSGLQRVRGMTLNDAHIFVRPDQIKAEFQKVVQLILEVYKD 414

Query: 418 FGFEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           F       +LS R      K    DA+W+ A++++K  +D +       ++     GE A
Sbjct: 415 FDLNDYSFRLSYRDPADTEKYFNDDAMWEKAQSMLKEAMDELG------LDYFEAEGEAA 468

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  +K AIG++    T+Q+DF LP RF+  YV    +   PV+IHR V  ++ER
Sbjct: 469 FYGPKLDVQVKTAIGKEETLSTVQLDFLLPERFDLSYVGEDGKPHRPVVIHRGVVSTMER 528

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETIN 592
           F+  +IE +KG  P WL+P+Q  V  +++    +YA++I   L +  L +E D R E + 
Sbjct: 529 FVAFLIEEYKGAFPTWLAPVQVEVIPVSNEAHFDYAKQIEEQLTAAGLRVEMDDREEKLG 588

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLP 647
           YKIRE  +KKIP +++ GDKE   + + +RR+GS  ++ +S  + +  +  E   
Sbjct: 589 YKIREAQMKKIPYMLVIGDKEVEAKGVNVRRYGSKDSETISFENFLAAIKAEITK 643


>gi|313623625|gb|EFR93788.1| threonyl-tRNA synthetase [Listeria innocua FSL J1-023]
          Length = 640

 Score =  663 bits (1709), Expect = 0.0,   Method: Composition-based stats.
 Identities = 265/648 (40%), Positives = 407/648 (62%), Gaps = 20/648 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K+TFPDG++K F    + +D+A SIS  L KKA+A  +NG++ DL  P+  +G+IEI+T
Sbjct: 1   MKITFPDGAVKEFEPGVSTADIAASISPGLKKKALAGKLNGELLDLVTPIHEDGAIEIVT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+   +L ++RHS AH+MA+A++ ++P+V+  +GP IE GFYYD D E   S + L +IE
Sbjct: 61  PDHEDALGILRHSTAHLMAQALKRLYPDVKFGVGPAIESGFYYDIDTEAVISDESLVEIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+MQ+I+  + P  ++ +S E+A + FE+  + YK+E++E+IP  E VT+Y QGE+FDLC
Sbjct: 121 KEMQKIVRENVPIEREVVSREEAIKRFEAIGDQYKLELIEAIPEDETVTIYTQGEFFDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RG HV STG+++ F KL+ VAGAYWRGDSN  ML RIYGTA+  +  L +++   +E+++
Sbjct: 181 RGVHVPSTGKIQVF-KLLSVAGAYWRGDSNNKMLQRIYGTAFFDKNGLKEFIQMQKEAKE 239

Query: 244 RDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           RDHRKL +E+DLF  + +   G+  W  KG  I + +  Y+  K +   Y  + TP + +
Sbjct: 240 RDHRKLGKELDLFANSIEVGQGLPLWLPKGATIRRVIERYIVDKEERLGYNHVYTPIMAN 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             L++ SGHWD Y  +MF     D+         L+PMNCP H+ ++ + + SYRELP+R
Sbjct: 300 VELYKTSGHWDHYHEDMFPTMKMDN-----EELVLRPMNCPHHMMIYKNDIHSYRELPIR 354

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AE G ++R E SG+L GL RVRG T +DAHVF   +Q+ +E  ++  LI+ +YKDF  +
Sbjct: 355 IAELGMMHRYEMSGALSGLQRVRGMTLNDAHVFVRPDQIKDEFKRVVELILEVYKDFDIK 414

Query: 422 KIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
               +LS R      K    DA+W+ A+ ++K  +D +       ++     GE AFYGP
Sbjct: 415 DYSFRLSYRDPKNTEKYFDDDAMWEKAQAMLKSAMDEMH------MDYFEAEGEAAFYGP 468

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  +K AIG++    T+Q+DF LP RF+  Y+    EK  PV+IHR V  ++ERF+  
Sbjct: 469 KLDVQVKTAIGKEETLSTVQLDFLLPERFDLTYIGEDGEKHRPVVIHRGVVSTMERFVAY 528

Query: 538 MIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +IE +KG  P WL+P+Q  +  +   + ++YA+ + + L+   L  E D RNE + YKIR
Sbjct: 529 LIEEYKGAFPTWLAPVQMELIPVNADAHLDYAKGVQDKLQRAGLRAEVDDRNEKLGYKIR 588

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           E   KKIP  ++ GD+E    S+ +RR+GS  ++ + L   I  +  E
Sbjct: 589 EAQTKKIPYALVLGDQEVEAGSVNVRRYGSKDSETMDLDAFIAQVVAE 636


>gi|77164649|ref|YP_343174.1| threonyl-tRNA synthetase, class IIA [Nitrosococcus oceani ATCC
           19707]
 gi|123757888|sp|Q3JC02|SYT_NITOC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|76882963|gb|ABA57644.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Nitrosococcus
           oceani ATCC 19707]
          Length = 644

 Score =  662 bits (1708), Expect = 0.0,   Method: Composition-based stats.
 Identities = 296/645 (45%), Positives = 421/645 (65%), Gaps = 18/645 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS ++F    T  DVA  I   LAK A+   I G++ D S P+  +  +
Sbjct: 1   MPV---ITLPDGSQRSFDHPVTVYDVAADIGPGLAKAALGGKIEGRLVDSSYPLEKDTKL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT  D   L +IRHSCAH++A+AV++++PE QV IGP+IEDGFYYDF   + F+ ++L
Sbjct: 58  TIITERDMDGLEIIRHSCAHLLAQAVKALYPEAQVTIGPVIEDGFYYDFAYPKGFTPEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IE KM+E++ +D    ++  S E+A  LF    E YK EI+ SIP++E ++LYRQG++
Sbjct: 118 EAIEAKMRELVEQDLSVHRELKSREEAVSLFRRMGEEYKAEIIASIPSEEEISLYRQGDF 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV ST ++K F KL KVAGAYWRGD+N  ML RIYGTAW  ++ L  YL+ LE
Sbjct: 178 VDLCRGPHVPSTARLKAF-KLTKVAGAYWRGDANNEMLQRIYGTAWPDKKALKAYLHRLE 236

Query: 240 ESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTP 297
           E+EKRDHR++  ++DLF I E+ G G++FWH  G +I + +  + + R     YE + TP
Sbjct: 237 EAEKRDHRRIGADLDLFSIQEEAGGGLVFWHPMGARIRRVIEDFWQERHTAAGYEMLYTP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +  + LWQ SGH D YR +M+     D      + + LKPMNCP HV ++   L+SYRE
Sbjct: 297 HIAHEELWQTSGHTDFYRESMYQPMEDDH-----QLYQLKPMNCPFHVLIYQGRLRSYRE 351

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R AE G+VYR+E SG+LHGLMRVRGFTQDDAH+FC +EQ+ NE L I +L + +   
Sbjct: 352 LPIRWAELGTVYRHEMSGALHGLMRVRGFTQDDAHIFCREEQIENEILGILDLTLEMLAA 411

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF++  + LSTRPEK VG +A+W+ A   ++  LD      +  ++  V  G GAFYGP
Sbjct: 412 FGFDRYEIDLSTRPEKSVGPEAIWEQATQALRSALD------KKGLDYAVDEGGGAFYGP 465

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  ++DAIGR WQC T+Q+DFNLP RF   YV     +  P+MIHRAV GS+ERF G+
Sbjct: 466 KIDIKIEDAIGRKWQCSTVQLDFNLPERFAMEYVAEDGARHRPIMIHRAVLGSLERFFGV 525

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE+++G  P WL+P+Q +V +IT     YA+++   +++       D RNE I +KIRE
Sbjct: 526 LIEHYEGKFPPWLAPVQVVVMSITDRQEGYARQVEEAMRNKGFRSLLDLRNEKIGFKIRE 585

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           H +++IP +++ GD+E + +++ +R   S     +SL   +  L+
Sbjct: 586 HILRRIPYLLVIGDREVANQTVAVRTRYSQDLGAMSLDAFMEHLS 630


>gi|158321007|ref|YP_001513514.1| threonyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
 gi|158141206|gb|ABW19518.1| threonyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
          Length = 636

 Score =  662 bits (1708), Expect = 0.0,   Method: Composition-based stats.
 Identities = 270/644 (41%), Positives = 402/644 (62%), Gaps = 16/644 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           S++ +   DGSI+      +  D A+ IS  LA+ A    ++GK  DL   +  +  + I
Sbjct: 2   SNVNVKLKDGSIRQVAKGTSILDFAKEISEGLARVATGAELDGKKVDLMTKIEEDCELNI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +  ED      +RH+ +HI+A+AV+ ++P  ++AIGP +++GFYYDFD E  F+ ++L +
Sbjct: 62  LRFEDENGKDFLRHTSSHILAQAVKRLYPGTKLAIGPSVDNGFYYDFDSEHVFTPEDLVK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK+M++I+  D    K  L   +A E  + + E YKVE+++ +P  E ++ YRQGE+ D
Sbjct: 122 IEKEMEKIVKEDLALEKFVLPRNEAIEFAKKQGEDYKVELIQDLPEDEVISFYRQGEFTD 181

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LC GPHV STG+VK   KL+ +AGAYWRG     ML RIYGT++  + +L ++L  LEE+
Sbjct: 182 LCAGPHVPSTGKVK-AIKLLSIAGAYWRGSEKNKMLQRIYGTSFTKKSDLEEHLNRLEEA 240

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVL 300
           +KRDHRKL +E+DLF + E+G G  F+H +G  +   L ++ R +  K  Y+EI TP +L
Sbjct: 241 KKRDHRKLGKELDLFSLQEEGPGFPFFHPRGMVLRNALENFWREEHVKRGYDEIKTPIIL 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ LW+QSGHWD Y+ NM+  K  D        +A+KPMNCPG + ++N    SYR+ P+
Sbjct: 301 NEKLWRQSGHWDHYQENMYFTKIDDG------DYAIKPMNCPGSILMYNRKKHSYRDFPI 354

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+ E G V+R+E SG+LHGLMRVR FTQDDAH+F   EQ+  E + I + +  +Y  FGF
Sbjct: 355 RMGELGIVHRHELSGALHGLMRVRNFTQDDAHLFVLPEQIKEEIIGIIDFVDYVYNIFGF 414

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           +  + +LSTRPE  +G+D  W+ A   +KG LD      +  ++  +  G+GAFYGPK +
Sbjct: 415 KYHI-ELSTRPENSMGTDEEWELAIGSLKGALD------EKELSYKINEGDGAFYGPKID 467

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           + L+D IGR WQCGTIQ+DF +P RF+  YV +  E   P+M+HR +FGS+ERFI I+IE
Sbjct: 468 FHLEDCIGRTWQCGTIQLDFQMPQRFDMNYVGADGENHRPIMLHRVIFGSVERFIAILIE 527

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           ++ G  P WL+PIQ  +  I     EYA ++   +K+  + +E D RNE I YKIRE  +
Sbjct: 528 HYAGKFPAWLAPIQVQILPIADKHHEYAIKLEREMKARGIRVEVDSRNEKIGYKIREAQL 587

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            K+P +++ GDKE     + +R         V +   I  L +E
Sbjct: 588 SKVPYMLVIGDKEMEAGEVAVRSRDRGEVGAVKVESFIEDLVQE 631


>gi|229161333|ref|ZP_04289318.1| Threonyl-tRNA synthetase [Bacillus cereus R309803]
 gi|228622147|gb|EEK78988.1| Threonyl-tRNA synthetase [Bacillus cereus R309803]
          Length = 639

 Score =  662 bits (1708), Expect = 0.0,   Method: Composition-based stats.
 Identities = 274/644 (42%), Positives = 427/644 (66%), Gaps = 17/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEII 62
            I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N ++ DL   + E   +EI+
Sbjct: 5   MIEIQFPDGSVKEFVKGITLEEIAGSISSSLKKKAVAGKVNEQLYDLRRNIEENAEVEIV 64

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +    + + RHS AHI+A+AV+ ++  V + +GP+IE+GFYYD D     + ++L +I
Sbjct: 65  TIDSNEGVEIARHSAAHILAQAVKRMYGNVNLGVGPVIENGFYYDMDLPSSVNVEDLPKI 124

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M++II+ +    +  +S E+A +LF+   +  K+E+LE+IP +E+VTLY+Q E+ DL
Sbjct: 125 EKEMKKIISENINIERVEVSREEAAKLFQEMNDGLKLELLEAIPNEESVTLYKQDEFVDL 184

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ STG +K F     V+GAYWRGDSN  +L RIYG A+++Q+ L +YL+F+EE+ 
Sbjct: 185 CRGPHLPSTGYLKAFQLT-NVSGAYWRGDSNNQVLQRIYGVAFSSQKALEEYLHFVEEAA 243

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KR+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R  + + +Y+E+ TP +++
Sbjct: 244 KRNHRKLGNELELFMFSEEAPGMPFYLPKGQIIRNELEAFLRGIQKEYNYQEVRTPFMMN 303

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           Q LW++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R
Sbjct: 304 QELWEKSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIR 357

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           + EFG V+R+E SG+L+GL+RVR F QDDAH+F T EQ+ +E   +   I  +YK FGFE
Sbjct: 358 MCEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPEQIEDEIKSVMAQIDYVYKTFGFE 417

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPE  +G D LW+ AE  +  VL ++           +  G+GAFYGPK ++
Sbjct: 418 Y-EVELSTRPEDSMGDDKLWEQAEAALANVLHSLNY------KYRLNEGDGAFYGPKIDF 470

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+ R  QCGTIQ+DF +P +F+  Y++  +EK  PV+IHRAV GS++RF+ I+IE+
Sbjct: 471 HIKDALNRSHQCGTIQLDFQMPEKFDLNYIDEKNEKRRPVVIHRAVLGSLDRFLAILIEH 530

Query: 542 FKGNLPLWLSPIQAIVTTITS-SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           F G  P W++P+Q  V  +++    +YA E+ + L    + +E D R+E + YKIRE  +
Sbjct: 531 FGGAFPAWVAPVQVKVIPVSNVVHEQYANEVVDKLAQAGIRVEQDMRDEKLGYKIREAQM 590

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +K+P +++ GDKE   +++ +R++    ++ + L   +  + +E
Sbjct: 591 QKVPYVLVIGDKEMESKAVNVRKYSEEQSEVIELDGFMESVKEE 634


>gi|145298933|ref|YP_001141774.1| threonyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
           A449]
 gi|166223317|sp|A4SMA4|SYT_AERS4 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|142851705|gb|ABO90026.1| threonyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
           A449]
          Length = 642

 Score =  662 bits (1708), Expect = 0.0,   Method: Composition-based stats.
 Identities = 296/641 (46%), Positives = 427/641 (66%), Gaps = 16/641 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  DVA  I   LAK  +A  +NG++ D  + +  + S+ IIT +
Sbjct: 4   ITLPDGSQRQFAHSVSVMDVAADIGPGLAKACIAGRVNGELVDACELIEADASLAIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L ++RHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D ++  + D+LA +E++
Sbjct: 64  DEEGLDILRHSCAHLLGHAIKQLWPQTKMAIGPVIDNGFYYDVDLDRTLTDDDLAALEER 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE-SIPAKENVTLYRQGEWFDLCR 184
           M  + A+D   +K+ +S ++AR++FE++ E YKVEIL+ +I   +   LY   E+ D+CR
Sbjct: 124 MLALAAKDYDVIKKKVSWQEARDVFEARGETYKVEILDQNIARDDQPGLYHHEEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +      F KL K++GAYWRGDSN  ML RIYGTAW  +++L  YL  LEE+ KR
Sbjct: 184 GPHVPNMRHCHHF-KLQKMSGAYWRGDSNNKMLQRIYGTAWADKKQLKGYLQRLEEASKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ +++DL+H+ E+  G++FWH  GW IF+ L +++R K+K+ DY+E+  P ++D+ 
Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELETFIRGKLKEYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SGHW+ Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWERSGHWEKYAQAMFT------TQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+  E      ++  +Y  FGFE I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIMEEVSACIRMVYDVYGTFGFENI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +VKLSTRPE+R+GSD  WD      +      +    + +   +  GEGAFYGPK E+ L
Sbjct: 417 VVKLSTRPEQRIGSDEAWD------RAEAALAEALVLNGLKYDLQPGEGAFYGPKIEFTL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D + R WQCGT+Q+DF LP R  A YV   +E+  PVMIHRA+ GS+ERFIGI+ E + 
Sbjct: 471 HDCLDRAWQCGTVQLDFALPGRLGATYVGEDNERHVPVMIHRAILGSLERFIGILTEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P QA+V  IT +  +YA ++A  L    L  + D RNE I +KIREH++K++
Sbjct: 531 GLFPTWLAPTQAVVMNITDNQADYAVKVAKALNDAGLRAKADLRNEKIGFKIREHTLKRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P +++CGDKE     I +R           + + + +LT+E
Sbjct: 591 PFMLVCGDKEVEAGKIAVRTRKGADLGTYPVEELVALLTQE 631


>gi|312134685|ref|YP_004002023.1| threonyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
 gi|311774736|gb|ADQ04223.1| threonyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
          Length = 639

 Score =  662 bits (1708), Expect = 0.0,   Method: Composition-based stats.
 Identities = 274/644 (42%), Positives = 406/644 (63%), Gaps = 17/644 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
             I +T PDG +       T  +  ++IS  L K+AVA  I+G + DL   + ++ S E+
Sbjct: 2   DKIAVTLPDGKVVEAEKGITALEFIKTISMKLYKEAVACRIDGVLKDLWTCLDKDCSFEV 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           +T        V  H+ +HI+A+AV+ ++ + V++ IGP I+ GFYYDFD E+  +++ L 
Sbjct: 62  VTFSSDEGKKVYWHTSSHILAQAVKRLFGDRVKLGIGPAIDRGFYYDFDIEESITNEILQ 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IE++MQ+II  D    +  L+ ++A +L + + E YKVE++  IP  E ++ Y+QGE+ 
Sbjct: 122 KIEQEMQKIIKEDLKIERFELTRDEAIKLMQERGEPYKVELINDIPEGETISFYKQGEFI 181

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLC GPH+ STG+VK F KL+ VAGAYWRGDS   ML R+YG ++  + +L +YL  LEE
Sbjct: 182 DLCTGPHLPSTGKVKAF-KLLSVAGAYWRGDSKNKMLQRVYGISYEKKSQLDEYLTMLEE 240

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQV 299
           ++KRDHRKL RE+DLF I ++G G  F+  KG  I   L  + R + K   Y+EI TP +
Sbjct: 241 AKKRDHRKLGRELDLFDIFDEGPGFPFFLPKGMIIRNILEDFWREEHKKRGYQEIKTPIM 300

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           L + LW QSGHWD Y+ NM+  K       D + FA+KPMNCPG + V+     SYRELP
Sbjct: 301 LTKELWIQSGHWDHYKENMYFTKI------DDQEFAIKPMNCPGGILVYKRKSHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
            RL E G V+R+E SG LHGLMRVR FTQDDAH+F    Q+ +E   + +LI   Y  FG
Sbjct: 355 QRLCELGLVHRHELSGVLHGLMRVRCFTQDDAHIFMLPSQIKDEIKGVIDLIDYFYNVFG 414

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F+   V+LSTRPE  +G+D  W+ AE+ +K  L+ I       I+  +  G+GAFYGPK 
Sbjct: 415 FKYH-VELSTRPENSMGTDEQWNMAESALKEALEEIG------ISYKINEGDGAFYGPKI 467

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           ++ L+D++ R WQC TIQ+DF +P RF+ +Y+     K  PVM+HR VFGSIERFI I+ 
Sbjct: 468 DFHLEDSLKRTWQCATIQLDFQMPERFDLYYIGEDGAKHRPVMLHRVVFGSIERFIAILT 527

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E+F G  P+WL+P Q  V  ++ +   YA +++ +LK +   +E D+R+ET+ YKIR+  
Sbjct: 528 EHFGGAFPVWLAPTQVRVIPVSDNFNNYAAKVSQILKENGFRVEEDYRSETVGYKIRDAQ 587

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           ++KIP ++I G+KE  E ++ +R          ++ + + ++ +
Sbjct: 588 LQKIPYMVIVGEKEQKENTVAVRDRKKGDLGSFTIDEFVSMMKE 631


>gi|300114474|ref|YP_003761049.1| threonyl-tRNA synthetase [Nitrosococcus watsonii C-113]
 gi|299540411|gb|ADJ28728.1| threonyl-tRNA synthetase [Nitrosococcus watsonii C-113]
          Length = 644

 Score =  662 bits (1708), Expect = 0.0,   Method: Composition-based stats.
 Identities = 298/645 (46%), Positives = 422/645 (65%), Gaps = 18/645 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS + F    T  DVA  I   LAK A+   I+G++ D + P+  +  +
Sbjct: 1   MPV---ITLPDGSQRGFDHPVTVYDVAADIGPGLAKAALGGKIDGRLVDSAYPLERDTKL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT  D   L +IRHSCAH++A+AV++++PE QV IGP+IEDGFYYDF   + F+ ++L
Sbjct: 58  TIITERDTDGLEIIRHSCAHLLAQAVKALYPEAQVTIGPVIEDGFYYDFAYPEGFTPEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IE KM+E++ +D    ++  S E+A  LF    E YK EI+ SIP++E ++LYRQG++
Sbjct: 118 EAIEAKMRELVEQDIAVHRELKSREEAISLFRRMGEEYKAEIIASIPSEEEISLYRQGDF 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV ST ++K F KL KVAGAYWRGD+N  ML RIYGTAW  ++ L  YL+ LE
Sbjct: 178 VDLCRGPHVPSTAKLKAF-KLTKVAGAYWRGDANNEMLQRIYGTAWPDKKALEAYLHRLE 236

Query: 240 ESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTP 297
           E+EKRDHR++  ++DLF I E+ G G++FWH  G +I + +  + + +     YE + TP
Sbjct: 237 EAEKRDHRRIGSDLDLFSIQEEAGGGLVFWHPMGARIRRVIEDFWQERHTAASYETLYTP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +  + LWQ SGH D YR +M+     D      + + LKPMNCP HV V+   L+SYRE
Sbjct: 297 HIAHEELWQTSGHTDFYRESMYQPMEDDH-----QLYQLKPMNCPFHVLVYQGRLRSYRE 351

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R AE G+VYR+E SG+LHGLMRVRGFTQDDAH+FC +EQ+ NE L I +L + +   
Sbjct: 352 LPIRWAELGTVYRHEMSGALHGLMRVRGFTQDDAHIFCREEQIENEILGILDLTLEMLAA 411

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF++  + LSTRPEK VG +A+WD A   ++  LD      +  ++  V  G GAFYGP
Sbjct: 412 FGFDRYEIDLSTRPEKSVGPEAIWDQATQALRSALD------KKGLDYAVDEGGGAFYGP 465

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  ++DAIGR WQC T+Q+DFNLP RF   YV     +  P+MIHRAV GS+ERF G+
Sbjct: 466 KIDIKIEDAIGRKWQCSTVQLDFNLPERFAMEYVAEDGARHRPIMIHRAVLGSLERFFGV 525

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE+++G  P WL+PIQ +V +IT     YA+++   +K+       D RNE I +KIRE
Sbjct: 526 LIEHYEGKFPPWLAPIQVVVMSITDRQEGYARQVEETMKNKGFRSLLDLRNEKIGFKIRE 585

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           H++++IP +++ GD+E + +++ +R   S     +SL   +  L+
Sbjct: 586 HTLRRIPYLLVIGDREVANQTVAVRTRYSQDLGVMSLDAFMEHLS 630


>gi|300772848|ref|ZP_07082717.1| threonine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861]
 gi|300759019|gb|EFK55846.1| threonine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861]
          Length = 641

 Score =  662 bits (1708), Expect = 0.0,   Method: Composition-based stats.
 Identities = 273/651 (41%), Positives = 401/651 (61%), Gaps = 19/651 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            IK+T PDGS++ +    + + VA SIS  LA+  +A  +NG++ D S P+  + S++++
Sbjct: 1   MIKITLPDGSVREYEKGTSAAQVALSISEGLARNVLAAEVNGEIWDASRPIEQDSSLKLL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
           T  D +  +   HS AH+MAEA+++++P V+  IGP IE GFYYD D  ++ FSSDE  Q
Sbjct: 61  TWNDDKGKSTFWHSSAHLMAEALEALYPGVKFGIGPAIETGFYYDVDFGDREFSSDEFKQ 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE KM E+  R   F ++ +S  +A + F  K + YK+++++ +     +T Y QG++ D
Sbjct: 121 IEDKMLELAKRKEVFERRAVSKAEALDYFTEKGDEYKLDLIKDL-EDGKITFYSQGDFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ +TG +K   KL  VAGAYWRGD +R  L+RIYG  +    ELT YL F+EE+
Sbjct: 180 LCRGPHIPNTGFIK-AIKLTNVAGAYWRGDESRKQLTRIYGVTFPKASELTDYLKFIEEA 238

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           +KRDHRKL +E++LF  +E    G+  W  KG  + Q LI +M+R ++K  YE + TP +
Sbjct: 239 KKRDHRKLGKELELFAFSEKVGMGLPLWLPKGAALRQKLIDFMQRAQLKAGYEPVVTPHI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             + L+  SGH++ Y  + F       T  +   F LKPMNCP H  ++    +SY++LP
Sbjct: 299 GHKQLYVTSGHYEKYGEDSFQ---PIKTPVEGEEFFLKPMNCPHHCEIYKTKPRSYKDLP 355

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           VR AEFG+VYR E SG LHGL RVRGFTQDDAH+FC  +Q+  E  K+ +L++ ++   G
Sbjct: 356 VRFAEFGTVYRYEQSGELHGLTRVRGFTQDDAHLFCRPDQVKEEFKKVIDLVLYVFGALG 415

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           FE  + ++S R  +     +GSD  W  AE  +    D      +  + T V  GE AFY
Sbjct: 416 FEDYIAQVSLRDPENRTKYIGSDENWALAERAIIEAAD------EKGLPTVVEYGEAAFY 469

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDA+GR WQ GTIQVD+NLP RF   Y  S + K  PVMIHRA FGS+ERFI
Sbjct: 470 GPKLDFMVKDALGRKWQLGTIQVDYNLPERFELEYTGSDNAKHRPVMIHRAPFGSLERFI 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE+  G  PLWL+P Q IV  ++    EYAQ++   L +  +    D R+E +  KI
Sbjct: 530 AVLIEHCAGRFPLWLAPEQFIVLPVSEKYEEYAQKLLESLNNSDIRGLIDLRDEKVGRKI 589

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           R+  +KK+P ++I G+KEA   ++ +R+ GS     ++  +   +L KE  
Sbjct: 590 RDAEVKKLPYMLIVGEKEAESGTVSVRKHGSGDVGSMTPEEFREVLIKEIT 640


>gi|148264672|ref|YP_001231378.1| threonyl-tRNA synthetase [Geobacter uraniireducens Rf4]
 gi|146398172|gb|ABQ26805.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Geobacter
           uraniireducens Rf4]
          Length = 645

 Score =  662 bits (1708), Expect = 0.0,   Method: Composition-based stats.
 Identities = 288/645 (44%), Positives = 412/645 (63%), Gaps = 18/645 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEI 61
           SD K+T PDG+ +     AT  D+A SI   LAK A+A  ING + DL+  + +G+ +EI
Sbjct: 11  SDTKVTLPDGTERTLQEGATVYDLAASIGAGLAKAAIAGKINGDLVDLATVLPDGAKVEI 70

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           IT +   +L +IRHS +H+MA+AV+S++PE +V IGP IE GFYYDFD + PF+ ++L +
Sbjct: 71  ITEKSAEALEIIRHSTSHLMAQAVKSLFPEAKVTIGPAIETGFYYDFDVDHPFTPEDLEK 130

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEKKM E+   +    +Q L+   A +LF    E YKVE++E + A   V+LYRQG++ D
Sbjct: 131 IEKKMSELAKANLKIERQVLTGADAIKLFRDMGEIYKVELIEDLSAD-TVSLYRQGDFVD 189

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ ST  +K F KL  +AGAYWRGD  R ML R+YGTA+  ++EL  YL  LEE+
Sbjct: 190 LCRGPHLPSTSHIKAF-KLTSIAGAYWRGDEKRKMLQRVYGTAFADKKELDAYLARLEEA 248

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF  +++   G++ WH KG  +   L  + R    +  Y+ +  PQ+
Sbjct: 249 KRRDHRKLGKELDLFSFSDEVGAGLVIWHPKGAMLRTILEDFERKEHFRRGYDIVVGPQI 308

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           L   LWQ+SGH+D+YR NM+  +       D + + +KPMNC  H+ ++   L+SYR+LP
Sbjct: 309 LKTELWQRSGHYDNYRENMYFTEV------DEQGYGIKPMNCLAHMMIYKSQLRSYRDLP 362

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R  E G+V+R+E +G LHGL+RVRGFTQDDAH+ CT EQ+  E   + + +  +   FG
Sbjct: 363 LRYFELGTVHRHERAGVLHGLLRVRGFTQDDAHILCTPEQLDGEIKGVLSFVKDVMGIFG 422

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           FE  M +LSTRPEK +GSD  W+ A   + G L              +  G+GAFYGPK 
Sbjct: 423 FEYEM-ELSTRPEKSIGSDEDWERATKALLGALQDSGRP------FEINEGDGAFYGPKI 475

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +  L+DA+ R WQC TIQ DF LP RF+  Y+ +  EK  PVM+HR + G+IERFIG++I
Sbjct: 476 DIKLRDALDRRWQCATIQCDFTLPERFDLTYIGADGEKKRPVMVHRVILGAIERFIGVLI 535

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E+F G+ P+WL+P+QAIV T+T + V YA EI   L++  + ++ DFRNE + +KIRE  
Sbjct: 536 EHFAGSFPVWLAPVQAIVLTVTDNQVSYANEIYTALRAAGIRVQQDFRNEKLGFKIREAQ 595

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           ++KIP ++I GDKE     +  R         +   + I  + KE
Sbjct: 596 LQKIPYMLIIGDKEVESGMVTPRFRDGNNLDSMKPAELIEFIEKE 640


>gi|311031377|ref|ZP_07709467.1| threonyl-tRNA synthetase [Bacillus sp. m3-13]
          Length = 643

 Score =  662 bits (1707), Expect = 0.0,   Method: Composition-based stats.
 Identities = 260/653 (39%), Positives = 414/653 (63%), Gaps = 20/653 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           M   +K+TFPDG++K F    T  D+A SIS  L KKA+A  +NG++ DL  P+  +G I
Sbjct: 1   MSELMKITFPDGAVKEFERGTTTEDIAASISPGLKKKAIAGKLNGELIDLRSPINIDGEI 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            II  +   +L ++RHS AH+MA+A++ ++  V++ IGP+IE+GFYYD D E+  + ++L
Sbjct: 61  SIIMQDSDEALGIMRHSTAHLMAQAIKRLYGNVKLGIGPVIENGFYYDIDLEESLTPEDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IEK+M++I++ +   ++  +S E+A   +E   +  K+E++  +P  E +++Y QGE+
Sbjct: 121 QKIEKEMKKIVSENLDVVRVEVSREEALRRYEELNDELKLELIRELPEGETISIYEQGEF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRG HV STG++K+F KL+ +AGAYWRGDS   ML RIYGTA+  + EL ++L  LE
Sbjct: 181 FDLCRGIHVPSTGKIKEF-KLLSIAGAYWRGDSKNKMLQRIYGTAFFKKAELDEHLRLLE 239

Query: 240 ESEKRDHRKLAREMDLFH-IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           E+++RDHRK+ +E+DLF    + G G+  W  KG  I + +  Y+  K  +  Y+ + TP
Sbjct: 240 EAKERDHRKIGKELDLFFNSQKVGQGLPLWLPKGATIRRVIERYIVDKEVELGYDHVYTP 299

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    L++ SGHWD Y+  MF     D+         L+PMNCP H+ V+ + + SYR+
Sbjct: 300 VMGSVELYKTSGHWDHYQDGMFPPMEMDN-----EQLVLRPMNCPHHMMVYKNSIHSYRQ 354

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LPVR+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+ +E  ++ NL++ +YKD
Sbjct: 355 LPVRIAELGTMHRYEMSGALAGLQRVRGMTLNDAHIFVRPDQIKDELKRVVNLVLEVYKD 414

Query: 418 FGFEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           FG +    +LS R      K    DA+W+ A+ ++K  +D +       ++    + E A
Sbjct: 415 FGLDDYSFRLSYRDPENKEKYFDDDAMWEKAQGMLKEAMDELG------LDYFEAIDEAA 468

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  ++ A+G++    T+Q+DF LP +F+  YV    ++  PV+IHR V  ++ER
Sbjct: 469 FYGPKLDVQVRTALGKEETLSTVQLDFLLPEKFDLTYVGEDGKQHRPVVIHRGVVSTMER 528

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETIN 592
           F+  +IE +KG  P WL+P+Q  V  ++     +YA+E+ +LLKS  + +E D RNE I 
Sbjct: 529 FVAFLIEEYKGAFPTWLAPVQVQVIPVSPDAHFDYAKEVQDLLKSKGIRVEMDERNEKIG 588

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           YKIRE  ++KIP +++ GD E  ER++ +R++G   ++ +SL   +  L KE+
Sbjct: 589 YKIREAQMQKIPYMLVLGDNEIQERAVNVRKYGEQKSETISLEKFVDDLLKEA 641


>gi|157826951|ref|YP_001496015.1| threonyl-tRNA synthetase [Rickettsia bellii OSU 85-389]
 gi|166225492|sp|A8GVV1|SYT_RICB8 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|157802255|gb|ABV78978.1| threonyl-tRNA synthetase [Rickettsia bellii OSU 85-389]
          Length = 633

 Score =  662 bits (1707), Expect = 0.0,   Method: Composition-based stats.
 Identities = 321/644 (49%), Positives = 438/644 (68%), Gaps = 15/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I ++FPDGS+K F  + T  ++A  IS SLAK A+   ING + DLS  +  +  + I+
Sbjct: 1   MINISFPDGSVKQFEKNITAFEIAVVISTSLAKAAMIAEINGDLKDLSTQIDNDCRLRIL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +DP  L VIRH  AH+ AEAV+ ++PE QV IGP IE+G+YYDF +++PF++D+LA I
Sbjct: 61  TAKDPECLEVIRHDAAHLTAEAVKELFPETQVTIGPAIENGYYYDFARDKPFTTDDLAVI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E KM E+  ++    ++    EKA E F+S  E YK EI+ SIP+ E ++LYRQG + DL
Sbjct: 121 EAKMHELAKKNEKVTRELWDREKAVEFFKSIGEHYKAEIIASIPSNEPISLYRQGNFIDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH  STG VK F KLMKVAGAYWRGDS   +L RIYGTAW T+++L  YL+ LEE+E
Sbjct: 181 CRGPHAPSTGFVKHF-KLMKVAGAYWRGDSRNEVLQRIYGTAWATKEQLESYLFMLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD 301
           KRDHRKL +E+DLFH  E+  G++FWH KGW ++ T+  Y+RRKI+ + Y E+ TP ++D
Sbjct: 240 KRDHRKLGKELDLFHFQEEAQGMVFWHDKGWSVYNTIEQYIRRKIRKNGYIEVKTPVLVD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW+ +R +MFA++  D T       ALKPMNCP HV +F  G+KSYR+LP+R
Sbjct: 300 KSLWELSGHWEKFRDDMFALETDDKT------LALKPMNCPCHVQIFKQGIKSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           ++EFG  +RNE SG+LHGLMRVR   QDDAH+FC +EQ+ +E +    L+  +YKDFGF 
Sbjct: 354 MSEFGLCHRNEASGALHGLMRVRSLVQDDAHIFCAEEQITDETVSFCKLLTEVYKDFGFT 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            I VK S RPE R GS   WD AEN +K  ++    S        +  GEGAFYGPK E+
Sbjct: 414 DIKVKFSDRPEVRAGSSETWDKAENALKEAVEKAGYS------YTLNPGEGAFYGPKLEF 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
           +L DAIGR WQCGT+Q+DF LP R +A YV +  EK  PVM+HRA+ GS+ERFIGI+IE 
Sbjct: 468 VLTDAIGRQWQCGTLQMDFVLPERLDASYVAASGEKKRPVMLHRAILGSLERFIGILIEE 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  PLWL+P+Q  + TITS   +YA E+   L    + ++ +   + INYKIRE S +
Sbjct: 528 YAGRFPLWLAPVQVAIATITSDLNDYALEVQKALIESGVRVDINISPDKINYKIREFSNQ 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           K+P+I + G +E   + + IRR G+T  + +S+   I  + +E+
Sbjct: 588 KVPMIAVIGKQEKENKQVTIRRLGTTEQEVLSIEQLIEYIREEN 631


>gi|304319895|ref|YP_003853538.1| Threonyl-tRNA synthetase [Parvularcula bermudensis HTCC2503]
 gi|303298798|gb|ADM08397.1| Threonyl-tRNA synthetase [Parvularcula bermudensis HTCC2503]
          Length = 657

 Score =  662 bits (1707), Expect = 0.0,   Method: Composition-based stats.
 Identities = 318/661 (48%), Positives = 456/661 (68%), Gaps = 19/661 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDG+++ +    TG+++A  IS+SLAKKA+AV +NG V DL DP++ + ++
Sbjct: 1   MP---TITLPDGAVRTYDAPLTGAELAGDISKSLAKKALAVKVNGTVVDLWDPIKSDAAV 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EI+T +    L +IRH  AH++A+AVQ+++P+ QV IGP+IEDGF+YDF ++ PFS+++ 
Sbjct: 58  EIVTRDSEEGLDLIRHDAAHLLAQAVQALFPDTQVTIGPVIEDGFFYDFARKTPFSTEDF 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IE+KM  ++  D    K+ +S E+A  LFE++ E YK EI+  +P  E V +Y  G+W
Sbjct: 118 DAIERKMAALVDADLETRKEVVSREEAARLFEAQGEHYKAEIVRDLPTDEEVKIYHHGDW 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           +DLCRGPH+ ST  + K FKL+K+AGAYWRGD    +L RIYGTAW  ++ L  YL  LE
Sbjct: 178 YDLCRGPHLPSTKHIGKAFKLLKLAGAYWRGDHRNEVLHRIYGTAWANEKALKAYLTRLE 237

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+EKRDHR+L ++MDLFH+ E+  G +FWH KG+ ++  L +Y+RR++    Y+E+ TPQ
Sbjct: 238 EAEKRDHRRLGKQMDLFHLQEEAHGSVFWHPKGYTMWLALEAYIRRRLDAAGYKEVKTPQ 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIK--------DLRTFALKPMNCPGHVAVFNH 350
           ++D  LWQ SGHW  Y  NMF V      ++        + +  A+KPMNCP HV +F  
Sbjct: 298 LIDAKLWQSSGHWGKYSQNMFVVPDEVPDVEGEGPVIDPEAKLMAVKPMNCPAHVQIFRQ 357

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
           G+ SYR+LP+R+AEFG  +RNEP G+LHG+MRVR FTQDDAH+FCT+EQ+  E ++   L
Sbjct: 358 GITSYRDLPIRMAEFGCCHRNEPHGALHGIMRVRQFTQDDAHIFCTEEQIVEETIRFCEL 417

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
             S+Y+D GFE + V ++TRPE+R+G+D  WD  E+ ++  L          +   VL G
Sbjct: 418 ASSVYRDLGFEDVRVAMATRPEQRIGTDEFWDKMESALEEALIAAG------LEFEVLPG 471

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           EGAFY PK EY L+DAIGR WQCGT+Q+D  LP R +A Y++    K  P+M+HRA+ GS
Sbjct: 472 EGAFYAPKLEYHLRDAIGRSWQCGTLQLDALLPERLDAVYIDEDGAKKRPIMLHRAILGS 531

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
           +ERF+GI+IEN  G +PLWL+P Q +V TIT+    +A+E A+  ++ +L +ETD RNE 
Sbjct: 532 MERFLGILIENHAGRMPLWLAPTQIVVATITTDVNAFAEEAADAFRAANLRVETDLRNEK 591

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDC 650
           INYK+REHS  K+PII + G +EA ER++ +RR GS  +Q +SL +A+ +   E+LPPD 
Sbjct: 592 INYKVREHSDGKVPIIAVIGAREAEERTLSVRRLGSKQSQTLSLDEAVAVFAAEALPPDL 651

Query: 651 Q 651
           +
Sbjct: 652 R 652


>gi|332187352|ref|ZP_08389090.1| threonyl-tRNA synthetase [Sphingomonas sp. S17]
 gi|332012513|gb|EGI54580.1| threonyl-tRNA synthetase [Sphingomonas sp. S17]
          Length = 664

 Score =  662 bits (1707), Expect = 0.0,   Method: Composition-based stats.
 Identities = 302/662 (45%), Positives = 436/662 (65%), Gaps = 19/662 (2%)

Query: 6   KLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITP 64
           ++T PDGS++      T +D+A +I   LAK A+A  ++G++ D+  P   + ++ ++T 
Sbjct: 3   RITLPDGSVREVAPGTTPADIAAAIGSGLAKAAIAARVDGELRDIMRPFEGDAALALVTA 62

Query: 65  EDP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQI 122
           +D   +L + RH  AH++AEAVQ+++P  Q+  GP+ +DGFYYDF  K++PF+ ++L  I
Sbjct: 63  KDEADALELARHDYAHVLAEAVQALFPGTQITFGPVTDDGFYYDFAPKDRPFTEEDLPAI 122

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE---- 178
           E +M++IIA+D P +++  + E+  E ++++ E++K E    +P  E +T+YR G+    
Sbjct: 123 EAEMRKIIAKDEPLIREVWTREQLIERWKAQGESFKAEWAAELPDDEELTVYRAGKGEDA 182

Query: 179 WFDLCRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           W D+CRGPH+ STG++    FKL +V+GAYWRGD    MLSRIYGT W  +++L ++L  
Sbjct: 183 WLDMCRGPHLASTGKLDPNAFKLTRVSGAYWRGDQKNAMLSRIYGTGWLNKKQLAEHLTR 242

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
           LEE+ KRDHRKL  EMDLFH+ ++  G +FWH KG++I++ L +YMRR I    Y E+ T
Sbjct: 243 LEEAAKRDHRKLGNEMDLFHLQQEAHGSVFWHPKGYRIWRELEAYMRRAIDATGYREVKT 302

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL--------RTFALKPMNCPGHVAVF 348
           PQV+D   W+QSGHW  YR NMF +       +D         +  ALKPMNCP HV +F
Sbjct: 303 PQVMDARQWEQSGHWGKYRENMFVIPDEVPNTEDEGPLVSDDAQWMALKPMNCPAHVLIF 362

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
             G+KSYR+LP+R  E G  +RNEP G+LHGLMRVR FTQDDAH+FC ++Q+  E     
Sbjct: 363 RQGIKSYRDLPLRFYENGCCHRNEPHGALHGLMRVRQFTQDDAHIFCREDQIVEEVRAFC 422

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
            L   IYKDFGF   + KL+ RPEKR G++ +WD AE  ++  +     +++       L
Sbjct: 423 ELADRIYKDFGFTYSI-KLALRPEKRFGTEEMWDQAEEELRNAVVAAGLATEQY-GWEEL 480

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
            GEGAFY PK E+ L DAIGR WQ GTIQ D  LP R +A Y+    E+  P+M+HRA+F
Sbjct: 481 PGEGAFYAPKLEWHLTDAIGRTWQVGTIQSDRVLPERLDASYIGEDGERHRPIMLHRAIF 540

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRN 588
           GS ERFIGI+IE++ G  P+WL+P+QA+V TI S A  YA+E A  L +  + +ETD RN
Sbjct: 541 GSYERFIGILIEHYAGRFPVWLAPVQAVVATIVSDADGYAEEAAAKLAAAGIRVETDLRN 600

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
           E INYK+REHS+ K+P++++ G +EA E  + +RR GS   + ++L +AI  L  E+ PP
Sbjct: 601 EKINYKVREHSVAKVPVLLVVGKREAEEGKVAVRRLGSQAQEVMTLDEAIATLRGEATPP 660

Query: 649 DC 650
           D 
Sbjct: 661 DL 662


>gi|238650420|ref|YP_002916272.1| threonyl-tRNA synthetase [Rickettsia peacockii str. Rustic]
 gi|259516667|sp|C4K0X3|SYT_RICPU RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|238624518|gb|ACR47224.1| threonyl-tRNA synthetase [Rickettsia peacockii str. Rustic]
          Length = 635

 Score =  662 bits (1707), Expect = 0.0,   Method: Composition-based stats.
 Identities = 327/644 (50%), Positives = 441/644 (68%), Gaps = 15/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I ++FPDGSIK F  + T  +VA +IS SLAK A+   ING++ DLS  +  +  + I+
Sbjct: 1   MINISFPDGSIKQFAKNITAYEVANAISMSLAKAAMVAEINGELQDLSIVIDNDCKLRIL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +DP  L +IRH  AH+ AEAV+ ++PE QV IGP IE+G+YYDF ++ PF++D+LA I
Sbjct: 61  TAKDPECLEIIRHDAAHLTAEAVKELFPETQVTIGPAIENGYYYDFARDTPFTTDDLAVI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E KMQE+  ++    ++    +KA E F+S  E YK EI+ SIPA E +TLYRQG + DL
Sbjct: 121 EAKMQELSQKNEQVTRELWDRDKAVEFFKSIGEHYKAEIIASIPAGEPITLYRQGNFIDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH  STG VK F KLMKVAGAYWRGDS   ML RIYGTAW T+++L  YL  LEE+E
Sbjct: 181 CRGPHAPSTGVVKHF-KLMKVAGAYWRGDSRNEMLQRIYGTAWATKEQLDSYLLMLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD 301
           KRDHRKL RE+DLFH  E+  G++FWH KGW I+ T+  Y+R+KI+ + Y E+ TP ++D
Sbjct: 240 KRDHRKLGRELDLFHFQEEAQGMVFWHDKGWSIYNTIEQYIRKKIRKNGYTEVKTPVLVD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW+ +R +MFA++  D T       ALKPMNCP HV +F  G+KSYR+LP+R
Sbjct: 300 KSLWEASGHWEKFRDDMFALETDDKT------LALKPMNCPCHVQIFKQGIKSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           ++EFG  +RNE SG+LHGLMRVR   QDDAH+FC  EQ+ +E +    L+  +YKDFGF 
Sbjct: 354 MSEFGLCHRNEASGALHGLMRVRSLVQDDAHIFCAAEQITDETVSFCKLLTEVYKDFGFT 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            I VK S RPE R GS+ +WD AEN +K  ++      Q      +  GEGAFYGPK E+
Sbjct: 414 DIKVKFSDRPEIRAGSNEVWDKAENALKEAVE------QAGFTYTLNPGEGAFYGPKLEF 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
           +L DAIGR WQCGT+Q+DF LP R +A YV +  EK  PVM+HRA+ GS+ERFIGI+IE 
Sbjct: 468 VLTDAIGRQWQCGTLQMDFVLPERLDASYVAASGEKKRPVMLHRAILGSLERFIGILIEE 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  PLWL+P+Q  + TITS   +YA E+   L  + +  + +   + INYKIRE S +
Sbjct: 528 YAGRFPLWLAPVQVAIATITSDLNDYALEVQKALIDNGVRTDFNISPDKINYKIREFSNQ 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           KIP+I + G +E   + + IRR G+T  + +S+   I ++ +E+
Sbjct: 588 KIPMIAVIGKQEQKNKQVAIRRLGTTDQEVLSVEQLIAVVKEEN 631


>gi|91205350|ref|YP_537705.1| threonyl-tRNA synthetase [Rickettsia bellii RML369-C]
 gi|122990926|sp|Q1RJ48|SYT_RICBR RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|91068894|gb|ABE04616.1| Threonyl-tRNA synthetase [Rickettsia bellii RML369-C]
          Length = 635

 Score =  662 bits (1707), Expect = 0.0,   Method: Composition-based stats.
 Identities = 321/644 (49%), Positives = 438/644 (68%), Gaps = 15/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I ++FPDGS+K F  + T  ++A  IS SLAK A+   ING + DLS  +  +  + I+
Sbjct: 1   MINISFPDGSVKQFEKNITAFEIAVVISTSLAKAAMIAEINGDLKDLSTQIDNDCRLRIL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +DP  L VIRH  AH+ AEAV+ ++PE QV IGP IE+G+YYDF +++PF++D+LA I
Sbjct: 61  TAKDPECLEVIRHDAAHLTAEAVKELFPETQVTIGPAIENGYYYDFARDKPFTTDDLAVI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E KM E+  ++    ++    EKA E F+S  E YK EI+ SIP+ E ++LYRQG + DL
Sbjct: 121 EAKMHELAKKNEKVTRELWDREKAVEFFKSIGEHYKAEIIASIPSNEPISLYRQGNFIDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH  STG VK F KLMKVAGAYWRGDS   +L RIYGTAW T+++L  YL+ LEE+E
Sbjct: 181 CRGPHAPSTGFVKHF-KLMKVAGAYWRGDSRNEVLQRIYGTAWATKEQLESYLFMLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD 301
           KRDHRKL +E+DLFH  E+  G++FWH KGW ++ T+  Y+RRKI+ + Y E+ TP ++D
Sbjct: 240 KRDHRKLGKELDLFHFQEEAQGMVFWHDKGWSVYNTIEQYIRRKIRKNGYIEVKTPVLVD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW+ +R +MFA++  D T       ALKPMNCP HV +F  G+KSYR+LP+R
Sbjct: 300 KSLWELSGHWEKFRDDMFALETDDKT------LALKPMNCPCHVQIFKQGIKSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           ++EFG  +RNE SG+LHGLMRVR   QDDAH+FC +EQ+ +E +    L+  +YKDFGF 
Sbjct: 354 MSEFGLCHRNEASGALHGLMRVRSLVQDDAHIFCAEEQITDETVSFCKLLTEVYKDFGFT 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            I VK S RPE R GS   WD AEN +K  ++    S        +  GEGAFYGPK E+
Sbjct: 414 DIKVKFSDRPEVRAGSSETWDKAENALKEAVEKAGYS------YTLNPGEGAFYGPKLEF 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
           +L DAIGR WQCGT+Q+DF LP R +A YV +  EK  PVM+HRA+ GS+ERFIGI+IE 
Sbjct: 468 VLTDAIGRQWQCGTLQMDFVLPERLDASYVAASGEKKRPVMLHRAILGSLERFIGILIEE 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  PLWL+P+Q  + TITS   +YA E+   L    + ++ +   + INYKIRE S +
Sbjct: 528 YAGRFPLWLAPVQVAIATITSDLNDYALEVQKALIESGVRVDINISPDKINYKIREFSNQ 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           K+P+I + G +E   + + IRR G+T  + +S+   I  + +E+
Sbjct: 588 KVPMIAVIGKQEKENKQVTIRRLGTTEQEVLSIEQLIEYIREEN 631


>gi|291531005|emb|CBK96590.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Eubacterium
           siraeum 70/3]
          Length = 639

 Score =  661 bits (1706), Expect = 0.0,   Method: Composition-based stats.
 Identities = 284/644 (44%), Positives = 405/644 (62%), Gaps = 17/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+T  DGS+K      +  DVA+ IS  LAK A    I+G++ DL   +  + ++EI+
Sbjct: 1   MIKVTLKDGSVKELESACSVFDVAKEISSRLAKAACVAKIDGEIKDLRTVIDSDCTLEIL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D       RH+ +HI+A+AV+ ++PEV++AIGP I++GFYYDFDK+ PF  ++L  I
Sbjct: 61  TFDDEDGKKAFRHTASHILAQAVKRLYPEVKLAIGPAIDNGFYYDFDKDTPFMPEDLEAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-ENVTLYRQGEWFD 181
           E +M++I+  D    +  ++   A +  +   E YKVE+ E    K E ++ Y+QGE+ D
Sbjct: 121 EAEMKKIVKEDLKLEQFEMAPADAIKYLKEIDEPYKVELCEEHAGKNEPISFYKQGEFTD 180

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LC GPH+ STG VK F KL    GAYWRG     MLSRIY TA+    EL  YL  +EE+
Sbjct: 181 LCAGPHLMSTGYVKAF-KLTSCTGAYWRGSEKNKMLSRIYATAFPKASELEAYLNMIEEA 239

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           +KRDHRKL +E++LF I ++G G  F+  KG  +  TLI Y R+   +D Y EI+TP +L
Sbjct: 240 KKRDHRKLGKELELFTIMDEGPGFPFFLPKGMTLKNTLIDYWRQIHTRDGYVEISTPIML 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ LW+ SGHWD Y+ NM+       T+ D   FA+KPMNCPG + V+    +SYR+LP+
Sbjct: 300 NRQLWETSGHWDHYKENMYT------TVIDGTEFAIKPMNCPGGILVYKSKPRSYRDLPI 353

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+ E G V+R+E SG+LHGLMRVR FTQDDAH+F T +Q+ +E   +  LI  +YK FGF
Sbjct: 354 RMGELGLVHRHEKSGALHGLMRVRCFTQDDAHIFMTPDQITDEIKGVVRLIDEVYKLFGF 413

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           +   V+LST+PE  +GS   WD A   ++  LD++       +   V  G+GAFYGPK +
Sbjct: 414 KYH-VELSTQPEDSMGSQEDWDMATEGLRKALDSLG------LPYVVNEGDGAFYGPKID 466

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           + L+D++GR WQCGTIQ+DF LP RF   Y  +  EK  P+MIHR VFGSIERFIGI+ E
Sbjct: 467 FHLEDSLGRTWQCGTIQLDFQLPMRFELEYTGADGEKHRPIMIHRVVFGSIERFIGILTE 526

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +F G  P+WL+P+Q  +  I     E+  ++A  LK   + +E D R+E I +KIRE  +
Sbjct: 527 HFAGAFPIWLAPVQVELMPIADRHNEFTSKVAAELKKRGIRVEVDGRSEKIGFKIREAQL 586

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +KIP +++ GDKE    ++ IR         +S+ D   ++ KE
Sbjct: 587 QKIPYMLVIGDKEVETENVSIRCRKRGDIGTMSVSDFCDMVEKE 630


>gi|47096724|ref|ZP_00234309.1| threonyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
 gi|254898274|ref|ZP_05258198.1| threonyl-tRNA synthetase [Listeria monocytogenes J0161]
 gi|254912233|ref|ZP_05262245.1| threonyl-tRNA synthetase [Listeria monocytogenes J2818]
 gi|254936561|ref|ZP_05268258.1| threonyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|47014908|gb|EAL05856.1| threonyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
 gi|258609155|gb|EEW21763.1| threonyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|293590208|gb|EFF98542.1| threonyl-tRNA synthetase [Listeria monocytogenes J2818]
          Length = 640

 Score =  661 bits (1706), Expect = 0.0,   Method: Composition-based stats.
 Identities = 263/648 (40%), Positives = 407/648 (62%), Gaps = 20/648 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K+TFPDG++K F    + +D+A SIS  L KKA+A  +NG++ DL  P+  +G+IEI+T
Sbjct: 1   MKITFPDGAVKEFEPGVSTADIAASISPGLKKKALAGKLNGELLDLVTPIHEDGAIEIVT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+   +L ++RHS AH+MA+A++ ++P+V+  +GP IE GFYYD D E   S + L +IE
Sbjct: 61  PDHEDALGILRHSTAHLMAQALKRLYPDVKFGVGPAIESGFYYDIDTEAVISDESLVEIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+MQ+I+  + P  ++ +S E+A + F+   + YK+E++E+IP  E VT+Y QGE+FDLC
Sbjct: 121 KEMQKIVRENVPIEREVVSREEAIKRFKVIGDQYKLELIEAIPEDETVTIYTQGEFFDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RG HV STG+++ F KL+ VAGAYWRGDSN  ML RIYGTA+  +  L +++   +E+++
Sbjct: 181 RGVHVPSTGKIQVF-KLLSVAGAYWRGDSNNKMLQRIYGTAFFDKNGLKEFIQMQKEAKE 239

Query: 244 RDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           RDHRKL +E++LF  + +   G+  W  KG  I + +  Y+  K +   Y  + TP + +
Sbjct: 240 RDHRKLGKELELFTNSIEVGQGLPLWLPKGATIRRVIERYIVDKEERLGYNHVYTPIMAN 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             L++ SGHWD Y  +MF     D+         L+PMNCP H+ ++ + + SYRELP+R
Sbjct: 300 VELYKTSGHWDHYHEDMFPTMKMDN-----EELVLRPMNCPHHMMIYKNDIHSYRELPIR 354

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AE G ++R E SG+L GL RVRG T +DAHVF   +Q+ +E  ++  LI+ +YKDF  +
Sbjct: 355 IAELGMMHRYEMSGALSGLQRVRGMTLNDAHVFVRPDQIKDEFKRVVELILEVYKDFDIK 414

Query: 422 KIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
               +LS R      K    DA+W+ A+ ++K  +D ++      ++     GE AFYGP
Sbjct: 415 DYSFRLSYRDPKNTEKYFDDDAMWEKAQAMLKSAMDEME------MDYFEAEGEAAFYGP 468

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  +K AIG++    T+Q+DF LP RF+  Y+    EK  PV+IHR V  ++ERF+  
Sbjct: 469 KLDVQVKTAIGKEETLSTVQLDFLLPERFDLSYIGEDGEKHRPVVIHRGVVSTMERFVAY 528

Query: 538 MIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +IE +KG  P WL+P+Q  +  +   + ++YA+ + + L+   L  E D RNE + YKIR
Sbjct: 529 LIEEYKGAFPTWLAPVQMELIPVNADAHLDYAKGVQDKLQRAGLRAEVDDRNEKLGYKIR 588

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           E   KKIP  ++ GD+E    S+ +RR+GS  ++ + L   I  +  E
Sbjct: 589 EAQTKKIPYALVLGDQEVEAGSVNVRRYGSKDSETMDLDAFIAQVVAE 636


>gi|167749880|ref|ZP_02422007.1| hypothetical protein EUBSIR_00848 [Eubacterium siraeum DSM 15702]
 gi|167657192|gb|EDS01322.1| hypothetical protein EUBSIR_00848 [Eubacterium siraeum DSM 15702]
          Length = 639

 Score =  661 bits (1706), Expect = 0.0,   Method: Composition-based stats.
 Identities = 284/644 (44%), Positives = 405/644 (62%), Gaps = 17/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+T  DGS+K      +  DVA+ IS  LAK A    I+G++ DL   +  + ++EI+
Sbjct: 1   MIKVTLKDGSVKELESACSVFDVAKEISPRLAKAACVAKIDGEIKDLRTVIDSDCTLEIL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D       RH+ +HI+A+AV+ ++PEV++AIGP I++GFYYDFDK+ PF  ++L  I
Sbjct: 61  TFDDEDGKKAFRHTASHILAQAVKRLYPEVKLAIGPAIDNGFYYDFDKDTPFMPEDLEAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-ENVTLYRQGEWFD 181
           E +M++I+  D    +  ++   A +  +   E YKVE+ E    K E ++ Y+QGE+ D
Sbjct: 121 EAEMKKIVKEDLKLEQFEMAPADAIKYLKEIDEPYKVELCEEHAGKNEPISFYKQGEFTD 180

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LC GPH+ STG VK F KL    GAYWRG     MLSRIY TA+    EL  YL  +EE+
Sbjct: 181 LCAGPHLMSTGYVKAF-KLTSCTGAYWRGSEKNKMLSRIYATAFPKASELEAYLNMIEEA 239

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           +KRDHRKL +E++LF I ++G G  F+  KG  +  TLI Y R+   +D Y EI+TP +L
Sbjct: 240 KKRDHRKLGKELELFTIMDEGPGFPFFLPKGMTLKNTLIDYWRQIHTRDGYVEISTPIML 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ LW+ SGHWD Y+ NM+       T+ D   FA+KPMNCPG + V+    +SYR+LP+
Sbjct: 300 NRQLWETSGHWDHYKENMYT------TVIDDTEFAIKPMNCPGGILVYKSKPRSYRDLPI 353

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+ E G V+R+E SG+LHGLMRVR FTQDDAH+F T +Q+ +E   +  LI  +YK FGF
Sbjct: 354 RMGELGLVHRHEKSGALHGLMRVRCFTQDDAHIFMTPDQITDEIKGVVRLIDEVYKLFGF 413

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           +   V+LST+PE  +GS   WD A   ++  LD++       +   V  G+GAFYGPK +
Sbjct: 414 KYH-VELSTQPEDSMGSQEDWDMATEGLRKALDSLG------LPYVVNEGDGAFYGPKID 466

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           + L+D++GR WQCGTIQ+DF LP RF   Y  +  EK  P+MIHR VFGSIERFIGI+ E
Sbjct: 467 FHLEDSLGRTWQCGTIQLDFQLPMRFELEYTGADGEKHRPIMIHRVVFGSIERFIGILTE 526

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +F G  P+WL+P+Q  +  I     E+  ++A  LK   + +E D R+E I +KIRE  +
Sbjct: 527 HFAGAFPIWLAPVQVELMPIADRHNEFTSKVAAELKKRGIRVEVDGRSEKIGFKIREAQL 586

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +KIP +++ GDKE    ++ IR         +S+ D   ++ KE
Sbjct: 587 QKIPYMLVIGDKEVETENVSIRCRKRGDIGTMSVSDFCDMVEKE 630


>gi|258544548|ref|ZP_05704782.1| threonine--tRNA ligase [Cardiobacterium hominis ATCC 15826]
 gi|258520179|gb|EEV89038.1| threonine--tRNA ligase [Cardiobacterium hominis ATCC 15826]
          Length = 639

 Score =  661 bits (1706), Expect = 0.0,   Method: Composition-based stats.
 Identities = 289/643 (44%), Positives = 428/643 (66%), Gaps = 16/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            + +T PDGS++ +    +G D+A SI   LAK A+AV ++G   DLSDP+  + S+ II
Sbjct: 1   MLNITLPDGSVRQYENPTSGRDIAASIGSGLAKAALAVRVDGVERDLSDPITADASVAII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T ++   + +IRHS AH++  A++ +WPE ++ IGP+IE+GFYYD D E  F+ ++L ++
Sbjct: 61  TAKEDAGVDIIRHSTAHLLGHALKQLWPEAKMVIGPVIENGFYYDIDSEHRFTPEDLEKL 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-ENVTLYRQGEWFD 181
           E +M+++ A      K +     AR+ F  + E +K+ +++      + V LY   E+ D
Sbjct: 121 EARMKDLAATGYAVEKVWTPVADARKAFSDRHEDFKLRLIDDFDDSVKEVGLYHHQEYLD 180

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           +CRGPHV   G VK F KL K++G+YWRGD++   L RIYG A+  Q+ L  YL    E+
Sbjct: 181 MCRGPHVPHMGHVKAF-KLTKLSGSYWRGDASGEPLQRIYGVAFADQKTLDAYLQQQAEA 239

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVL 300
           EKRDHR++ +++D FH+ E+  G++FWH KGW I++ + +YMR K++   YEE+  PQ+L
Sbjct: 240 EKRDHRRIGKQLDFFHLQEEAPGMVFWHAKGWVIYREIENYMRGKLRKYGYEEVQGPQIL 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D+ LW++SGHWD +  NMF          D   +A+KPMNCPGH+ +FN GL+SYRELPV
Sbjct: 300 DRSLWEKSGHWDKFGGNMFTC------CIDEHDYAIKPMNCPGHIQIFNQGLRSYRELPV 353

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R AEFG  +RNEPSG+LHGLMRVR F QDD H+FCT+ Q+  E  ++  ++  +Y DFGF
Sbjct: 354 RYAEFGICHRNEPSGTLHGLMRVRRFVQDDGHIFCTRSQIREEIERVCQMVYEVYHDFGF 413

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           +++ + LSTRPEKRVGSD +WD+AE  ++  L+             +  GEGAFYGPK E
Sbjct: 414 DEVELALSTRPEKRVGSDEIWDEAEADLQAALEAQGKP------FRLQPGEGAFYGPKIE 467

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           + LKD++GR WQCGT+Q+DF++P R  A Y++ +  +  PVMIHRA+ GS+ERFIGI+IE
Sbjct: 468 FTLKDSLGRRWQCGTVQLDFSMPERLGAHYIDENDVRQTPVMIHRAILGSLERFIGILIE 527

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
            + G +PLWLSP+QA+V  IT +  +YA  +A  L +  L +E D RNE INYKIREH++
Sbjct: 528 QYAGQMPLWLSPVQAVVMPITDAQADYATAVAEKLATAGLRVEKDLRNEKINYKIREHTL 587

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +++P +++ GD+E +  S+ +R+        +S+ D I  L +
Sbjct: 588 QRVPFMLVAGDREKAASSVSVRQRDGKDLGVMSVDDLITHLQQ 630


>gi|212212292|ref|YP_002303228.1| threonyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
 gi|212010702|gb|ACJ18083.1| threonyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
          Length = 660

 Score =  661 bits (1706), Expect = 0.0,   Method: Composition-based stats.
 Identities = 298/646 (46%), Positives = 428/646 (66%), Gaps = 18/646 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP+      PDGS+K F    +   VAESI  SLAK A+A  I+  + D+S  + ++ S+
Sbjct: 10  MPTM---QLPDGSVKQFSKPVSVQAVAESIGTSLAKAALAGKIDDHLVDVSFIIDKDVSL 66

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +DP  L VIRHS AH++A AV+ ++P+ +V IGP++EDGFYYDF  E+ F+ ++L
Sbjct: 67  RIITEKDPEGLEVIRHSAAHLLAHAVKELFPKAEVTIGPVVEDGFYYDFAFERSFTPEDL 126

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IE+KM+ +   D    ++ LS ++A  LF+   E YKVEI+  IP +E +T Y+QG++
Sbjct: 127 EKIEEKMRSLAKADLAVERRVLSRDEALTLFKKMGERYKVEIIRDIPKEEILTAYQQGDF 186

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV  TG +K F KL K+AGAYWRGDSN  ML RIYGTAW   + L  YLY LE
Sbjct: 187 IDLCRGPHVPRTGMLKAF-KLTKLAGAYWRGDSNNEMLQRIYGTAWADTKALKAYLYRLE 245

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQ 298
           E+EKRDHR LA++MDLFH   +  G +FWH  GW I   +  Y+R    K  Y+E++TPQ
Sbjct: 246 EAEKRDHRLLAKKMDLFHFQPESPGNVFWHPNGWSIILQMREYIRHITHKYGYQEVHTPQ 305

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D  LW +SGH + +  ++F++        + + + +KPM+CP HV +FN G+KSYR+L
Sbjct: 306 LIDASLWDKSGHLEKFGDDIFSL------PLEPQQYVIKPMSCPAHVQIFNQGVKSYRDL 359

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R AEFG+ +RNEPSG+LHGLMR+RGF QDDAH+FCT++Q+ +E     + +  +Y DF
Sbjct: 360 PLRYAEFGACHRNEPSGTLHGLMRLRGFVQDDAHIFCTEDQIQSEVSAFIDQLHEVYADF 419

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF +++ KLSTRPEKRVGSD +W  AE  +   L+      +  +   +L GEGAFYGPK
Sbjct: 420 GFTEVIHKLSTRPEKRVGSDEVWTKAEQALAEALN------RKGVEWDILPGEGAFYGPK 473

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ L+D +GR WQCGT+QVDF++P R  A Y+     K  PVMIHRA+ GS ERF+GI+
Sbjct: 474 IEFSLRDCLGRIWQCGTVQVDFSVPERLGAHYIAEDGSKKPPVMIHRAILGSFERFLGIL 533

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           +E   G LPLWL+P+Q +V  IT    +Y  +    L++  +   +D RNE I +KIREH
Sbjct: 534 LEESAGKLPLWLAPVQVVVMNITDRQADYVGQTVENLQNLGIRAHSDLRNEKIGFKIREH 593

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +I ++P +++ GD+E +++++ +R      +  ++L +    L  E
Sbjct: 594 TIARVPYLVVIGDREVADKTLSVRALEDEASTTITLEEFARQLKAE 639


>gi|325578419|ref|ZP_08148554.1| threonine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
 gi|325160155|gb|EGC72284.1| threonine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
          Length = 643

 Score =  661 bits (1706), Expect = 0.0,   Method: Composition-based stats.
 Identities = 294/648 (45%), Positives = 427/648 (65%), Gaps = 16/648 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS + F    +  +VA+ I   LAK  +A  +NG   D  D +  + ++EIIT +
Sbjct: 4   ITLPDGSKREFDRPVSVLEVAQDIGAGLAKATIAGRVNGVRHDACDIINEDANLEIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ ++P+V++AIGP IE+GFYYD D ++  + +++  IEK+
Sbjct: 64  DEDGLEIIRHSCAHLLGHAIKQLFPDVKMAIGPTIENGFYYDVDLDRSLTQEDIDAIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K  +S ++AR+ FE + E YK+ IL E+I       LY   E+ D+CR
Sbjct: 124 MLELAKTNYDVIKTPVSWQEARDTFEKRGEPYKMAILDENIERTATPALYHHEEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +      F KLMKVAGAYWRGDS   ML RIYGTAW  +++L +YL  LEE+ KR
Sbjct: 184 GPHVPNMRFCHNF-KLMKVAGAYWRGDSKNKMLQRIYGTAWADKKQLAEYLTRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHRK+ + +DL+H+ E+  G++FWH  GW IF+ L +++R K+K+ DY+E+  P ++D+ 
Sbjct: 243 DHRKIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW +Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWQNYGDLMFT------TQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+ +E      ++  IY  FGF+ I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQIESEVTSCIKMVYDIYSTFGFQNI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            VKLSTRPEKR+G+D +WD      +         + + +   +  GEGAFYGPK E+ L
Sbjct: 417 QVKLSTRPEKRIGADDMWD------RAEAGLAAALAHNGLEYEIQAGEGAFYGPKIEFAL 470

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D + R+WQCGTIQ+DF LP R NA YV   +++  PVMIHRA+ GSIERFIGI+ E + 
Sbjct: 471 RDCLDREWQCGTIQLDFALPGRLNASYVAEDNDRRTPVMIHRAILGSIERFIGIITEEYA 530

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+QA+V  IT S  +Y Q++   L    L ++ D RNE + +KIREH+++++
Sbjct: 531 GFFPAWLAPVQAVVMNITDSQADYVQKVVKQLSDAGLRVKADLRNEKVGFKIREHTLRRV 590

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           P +++CGDKE +E  + +R          ++ +   IL  +    + +
Sbjct: 591 PYMLVCGDKEIAEGKVAVRTRKGADLGTFTIEEFAEILKSQVRQRELK 638


>gi|289434839|ref|YP_003464711.1| hypothetical protein lse_1474 [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289171083|emb|CBH27625.1| thrS [Listeria seeligeri serovar 1/2b str. SLCC3954]
          Length = 640

 Score =  661 bits (1706), Expect = 0.0,   Method: Composition-based stats.
 Identities = 263/648 (40%), Positives = 409/648 (63%), Gaps = 20/648 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K+TFPDG+ K F    + +D+A SIS  L KKA+A  +NG++ DL  P+  +G+IEI+T
Sbjct: 1   MKITFPDGAEKEFEPGVSTADIAFSISPGLKKKALAGKLNGELLDLVTPIHEDGAIEIVT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+   +L ++RHS AH+MA+A++ ++P+V+  +GP I+ GFYYD D E   S + L +IE
Sbjct: 61  PDHEDALGILRHSTAHLMAQALKRLYPDVKFGVGPAIDSGFYYDIDTEAVISDESLVEIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+MQ+I+  + P  ++ +S E+A + F++  + YK+E++E+IPA E VT+Y QGE+FDLC
Sbjct: 121 KEMQKIVRENVPIEREVVSREEAIKRFKAIGDEYKLELIEAIPADETVTIYTQGEFFDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RG HV STG+++ F KL+ VAGAYWRGDSN  ML RIYGTA+  +  L +++   +E+++
Sbjct: 181 RGVHVPSTGKIQVF-KLLSVAGAYWRGDSNNKMLQRIYGTAFFDKNGLKEFIQMQKEAKE 239

Query: 244 RDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           RDHRKL +E++LF  + +   G+  W  KG  I + +  Y+  K +   Y  + TP + +
Sbjct: 240 RDHRKLGKELELFTNSIEVGQGLPLWLPKGATIRRVIERYIVDKEERLGYNHVYTPIMAN 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             L++ SGHWD Y  +MF     D+         L+PMNCP H+ ++ + + SYRELP+R
Sbjct: 300 VELYKTSGHWDHYHEDMFPTMKMDN-----EELVLRPMNCPHHMMIYKNDIHSYRELPIR 354

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AE G ++R E SG+L GL RVRG T +DAHVF   +Q+ +E  ++  LI+ +YKDF  +
Sbjct: 355 IAELGMMHRYEMSGALSGLQRVRGMTLNDAHVFVRPDQIKDEFKRVVELILEVYKDFDIK 414

Query: 422 KIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
               +LS R      K    DA+WD A+ ++K  +D +       ++     GE AFYGP
Sbjct: 415 DYSFRLSYRDPKNTEKYFDDDAMWDKAQAMLKSAMDEMG------MDYFEADGEAAFYGP 468

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  +K AIG++    T+Q+DF LP RF+  Y+    EK  PV+IHR V  ++ERF+  
Sbjct: 469 KLDVQVKTAIGKEETLSTVQLDFLLPERFDLTYIGEDGEKHRPVVIHRGVVSTMERFVAY 528

Query: 538 MIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +IE +KG  P WL+P+Q  +  +   + ++YA+ + + L+   L +E D RNE + YKIR
Sbjct: 529 LIEEYKGAFPTWLAPVQMELIPVNADAHLDYAKGVQDKLQRAGLRVEVDDRNEKLGYKIR 588

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           E   KKIP  ++ GD+E    ++ +RR+GS  ++ + L   I  + +E
Sbjct: 589 EAQTKKIPYALVLGDQEMESGTVNVRRYGSKDSETMELDTFISQVVQE 636


>gi|118602649|ref|YP_903864.1| threonyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|166225495|sp|A1AWT6|SYT_RUTMC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|118567588|gb|ABL02393.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Candidatus
           Ruthia magnifica str. Cm (Calyptogena magnifica)]
          Length = 632

 Score =  661 bits (1706), Expect = 0.0,   Method: Composition-based stats.
 Identities = 301/642 (46%), Positives = 438/642 (68%), Gaps = 15/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDG+ K F    + + VA+SI  SLAK A+A  ++G++ D S  ++ + ++ IIT  
Sbjct: 4   ITLPDGTQKIFEQVVSVTQVAKSIGLSLAKAALAGEVDGQLVDTSFLIKTDANLAIITAN 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D + L +IRHS AH++A+A Q ++P+ QV IGP+I++GFYYDF  +  FS  +LA+IEK 
Sbjct: 64  DDKGLEIIRHSTAHLLAQATQMLYPKAQVTIGPVIDNGFYYDFVYKDGFSESDLAKIEKN 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M +++ ++    +  +S  +A + F+ K E YK EI+ESIPA + ++LY+QG + DLCRG
Sbjct: 124 MHKLVKQNLKIERFEMSRNEAIQFFKDKGEYYKTEIIESIPAGQTLSLYKQGNFIDLCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV  T ++K F KLMK+AGAYWRGDSN  ML R+YGTAW T+Q+L ++L+ LEE+ +RD
Sbjct: 184 PHVPLTAKLKAF-KLMKLAGAYWRGDSNNEMLQRVYGTAWATKQDLEEHLHRLEEASRRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHL 304
           HRK+ +  DLFHI E+  G+IFWH KGW + Q +  YMR     +DY+E++TPQ++D+ L
Sbjct: 243 HRKIGKIQDLFHIQEEAPGMIFWHAKGWTLCQLIEQYMRGIFKDNDYQEVHTPQLIDKSL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHW+ +   MF       T  + R +A+KPMNCP H+ ++N GLKSYR+LP+RLAE
Sbjct: 303 WEKSGHWEKFGDTMFT------TSSENRDYAVKPMNCPAHIQIYNQGLKSYRDLPLRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNEPSG+LHG+MRVR F QDD H+FCT EQ+  E     +L  ++YK FGF+K+ 
Sbjct: 357 FGSCHRNEPSGTLHGIMRVRNFVQDDGHIFCTPEQIQVEVSTFIDLTFAVYKHFGFDKVD 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +KLSTRPE  VGSD +WD AE          +      I      GEGAFYGPK E++LK
Sbjct: 417 IKLSTRPENHVGSDEVWDKAEAA------LAEALDAKVIKWEFQKGEGAFYGPKIEFVLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D + R WQCGT+QVDF++P R +A +++ ++ K  PV++HRA+ GS+ERF+GI+IE+++G
Sbjct: 471 DCLERQWQCGTLQVDFSMPERLDAQFIDENNIKQTPVVLHRAILGSLERFVGILIEHYEG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P WL+PIQA+V  I+    ++  +I   LK   L + +D RNE I +KIREHS+++ P
Sbjct: 531 AYPCWLTPIQAVVINISGKQADFVIDITKKLKKQGLRVISDLRNEKIGFKIREHSLQRYP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
            I+I GD+E  +  I +R+ G      +S+   +  + +E L
Sbjct: 591 YILIVGDREMEKDQISVRQRGGKDLGVMSIEAFVEKINQEIL 632


>gi|157828174|ref|YP_001494416.1| threonyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|166225494|sp|A8GR83|SYT_RICRS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|157800655|gb|ABV75908.1| threonyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila
           Smith']
          Length = 635

 Score =  661 bits (1706), Expect = 0.0,   Method: Composition-based stats.
 Identities = 327/644 (50%), Positives = 441/644 (68%), Gaps = 15/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I ++FPDGSIK F  + T  +VA +IS SLAK A+   ING++ DLS  +  +    I+
Sbjct: 1   MINISFPDGSIKQFAKNITAYEVANAISMSLAKAAMVAEINGELQDLSIVIDNDCKFRIL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +DP  L +IRH  AH+ AEAV+ ++PE QV IGP IE+G+YYDF +++PF++D+LA I
Sbjct: 61  TAKDPECLEIIRHDAAHLTAEAVKELFPETQVTIGPAIENGYYYDFARDKPFTNDDLAVI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E KMQE+  ++    ++    +KA E F+S  E YK EI+ SIPA E +TLYRQG + DL
Sbjct: 121 EAKMQELSQKNEQVTRELWDRDKAVEFFKSIGEHYKAEIIASIPAGEPITLYRQGNFIDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH  STG VK F KLMKVAGAYWRGDS   ML RIYGTAW T+++L  YL  LEE+E
Sbjct: 181 CRGPHSPSTGVVKHF-KLMKVAGAYWRGDSRNEMLQRIYGTAWATKEQLDSYLLMLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD 301
           KRDHRKL RE+DLFH  E+  G++FWH KGW I+ T+  Y+R+KI+ + Y E+ TP ++D
Sbjct: 240 KRDHRKLGRELDLFHFQEEAQGMVFWHDKGWSIYNTIEQYIRKKIRKNGYTEVKTPVLVD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW+ +R +MFA++  D T       ALKPMNCP HV +F  G+KSYR+LP+R
Sbjct: 300 KSLWEASGHWEKFRDDMFALETDDKT------LALKPMNCPCHVQIFKQGIKSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           ++EFG  +RNE SG+LHGLMRVR   QDDAH+FC  EQ+ +E +    L+  +YKDFGF 
Sbjct: 354 MSEFGLCHRNEASGALHGLMRVRSLVQDDAHIFCAAEQITDETVSFCKLLTEVYKDFGFT 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            I VK S RPE R GS+ +WD AEN +K  ++      Q      +  GEGAFYGPK E+
Sbjct: 414 DIKVKFSDRPEIRAGSNEVWDKAENALKEAVE------QAGFTYTLNPGEGAFYGPKLEF 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
           +L DAIGR WQCGT+Q+DF LP R +A YV +  EK  PVM+HRA+ GS+ERFIGI+IE 
Sbjct: 468 VLTDAIGRQWQCGTLQMDFVLPERLDASYVAASGEKKRPVMLHRAILGSLERFIGILIEE 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  PLWL+P+Q  + TITS   +YA E+   L  + +  + +   + INYKIRE S +
Sbjct: 528 YAGRFPLWLAPVQVAIATITSDLNDYALEVQKALIDNGVRTDFNISPDKINYKIREFSNQ 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           KIP+I + G +E   + + IRR G+T  + +S+   I ++ +E+
Sbjct: 588 KIPMIAVIGKQEQENKQVAIRRLGTTDQEVLSVEQLIAVVKEEN 631


>gi|315282482|ref|ZP_07870886.1| threonyl-tRNA synthetase [Listeria marthii FSL S4-120]
 gi|313613866|gb|EFR87606.1| threonyl-tRNA synthetase [Listeria marthii FSL S4-120]
          Length = 640

 Score =  661 bits (1705), Expect = 0.0,   Method: Composition-based stats.
 Identities = 264/648 (40%), Positives = 406/648 (62%), Gaps = 20/648 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K+TFPDG++K F    + +D+A SIS  L KKA+A   NG++ DL  P+  +G+IEI+T
Sbjct: 1   MKITFPDGAVKEFEPGVSTADIAASISPGLKKKALAGKFNGELLDLVTPIHEDGAIEIVT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+   +L ++RHS AH+MA+A++ ++P+V+  +GP IE GFYYD D E   S + L +IE
Sbjct: 61  PDHEDALGILRHSTAHLMAQALKRLYPDVKFGVGPAIESGFYYDIDTEAVISDESLVEIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+MQ+I+  + P  ++ +S E+A + F++  + YK+E++E+IP  E VT+Y QGE+FDLC
Sbjct: 121 KEMQKIVRENVPIEREVVSREEAIKRFKAIGDHYKLELIEAIPEDETVTIYTQGEFFDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RG HV STG+++ F KL+ VAGAYWRGDSN  ML RIYGTA+  +  L +++   +E+++
Sbjct: 181 RGVHVPSTGKIQVF-KLLSVAGAYWRGDSNNKMLQRIYGTAFFDKNGLKEFIQMQKEAKE 239

Query: 244 RDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           RDHRKL +E+DLF  + +   G+  W  KG  I + +  Y+  K +   Y  + TP + +
Sbjct: 240 RDHRKLGKELDLFTNSIEVGQGLPLWLPKGATIRRVIERYIVDKEERLGYNHVYTPIMAN 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             L++ SGHWD Y  +MF     D+         L+PMNCP H+ ++ + + SYRELP+R
Sbjct: 300 VELYKTSGHWDHYHEDMFPTMKMDN-----EELVLRPMNCPHHMMIYKNDIHSYRELPIR 354

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AE G ++R E SG+L GL RVRG T +DAHVF   +Q+ +E  ++  LI+ +YKDF  +
Sbjct: 355 IAELGMMHRYEMSGALSGLQRVRGMTLNDAHVFVRPDQIKDEFKRVVELILEVYKDFDIK 414

Query: 422 KIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
               +LS R      K    DA+W+ A++++K  +D +       ++     GE AFYGP
Sbjct: 415 DYSFRLSYRDPKNTEKYFDDDAMWEKAQSMLKSAMDEMG------MDYFEAEGEAAFYGP 468

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  +K AIG++    T+Q+DF LP RF+  Y+    EK  PV+IHR V  ++ERF+  
Sbjct: 469 KLDVQVKTAIGKEETLSTVQLDFLLPERFDLTYIGEDGEKHRPVVIHRGVVSTMERFVAY 528

Query: 538 MIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +IE +KG  P WL+P+Q  +  +   + + YA+ + + L+   L  E D RNE + YKIR
Sbjct: 529 LIEEYKGAFPTWLAPVQMELIPVNADAHLNYAKGVQDKLQRAGLRSEVDDRNEKLGYKIR 588

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           E   KKIP  ++ GD+E    S+ +RR+GS  ++ + L   I  +  E
Sbjct: 589 EAQTKKIPYALVLGDQEVEAGSVNVRRYGSKDSETMDLDAFIAQVVAE 636


>gi|261406470|ref|YP_003242711.1| threonyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
 gi|261282933|gb|ACX64904.1| threonyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
          Length = 636

 Score =  661 bits (1705), Expect = 0.0,   Method: Composition-based stats.
 Identities = 269/645 (41%), Positives = 413/645 (64%), Gaps = 20/645 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +T  DGS K +P   T   +AESI   L K AVA   +GK+ DL+  +  +  + II
Sbjct: 2   SIVVTLQDGSKKEYPAQTTMFQIAESIHSGLKKNAVAAKADGKLVDLNQELREDAEVSII 61

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPE--VQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           T +    L V RHS AH+MA+AV+ ++    V + +GP+IEDGFYYD D     ++D+L 
Sbjct: 62  TLDSEDGLYVYRHSTAHLMAQAVKRLYGSESVHLGVGPVIEDGFYYDMDLGHSITADDLI 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IE++MQ+I+  D P L++ +  ++A  +   + + YK+E++  +P  E +++Y QGE+ 
Sbjct: 122 TIEREMQKIVQEDLPILRKEVGRKEAERI--FQDDPYKMELIRELPEDEVISVYEQGEFV 179

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ STG++K F KLM VAGAYWRGDS+  ML RIYGTA+  + +L ++L  LEE
Sbjct: 180 DLCRGPHLPSTGRIKAF-KLMSVAGAYWRGDSDNKMLQRIYGTAFPKKSQLDEHLLLLEE 238

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           ++KRDHRKL +E+ LF  +E+  G+ F+   G  I   L  + R  +   DY+E+ TP +
Sbjct: 239 AKKRDHRKLGKELGLFMFSEEAPGMPFFLPNGMIIRNELEQFARGLQFHRDYDEVRTPLM 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           +++ LW+ SGHWD Y+ NM+  +       D   +ALKPMNCPGH+ V+ + L SYRELP
Sbjct: 299 MNKRLWEMSGHWDHYKDNMYFTQV------DETEYALKPMNCPGHMLVYKNSLHSYRELP 352

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R++EFG V+R+E SG+L+G+MRVR F QDDAH+F   +Q+  E  ++ + I  +Y+ FG
Sbjct: 353 IRISEFGQVHRHEFSGALNGMMRVRTFCQDDAHIFVRPDQIQEEIKQVIDFISRVYQVFG 412

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           FE  + +LSTRPE  +GS+ LW+ AE  ++ VLD +       +   +  G+GAFYGPK 
Sbjct: 413 FEYTI-ELSTRPEDSMGSEELWEQAETSLQQVLDQLG------LPYRINEGDGAFYGPKI 465

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           ++ + D++ R WQCGTIQ+DF  P +F+  Y+   ++K  PV+IHRAVFGSIERFIGI+ 
Sbjct: 466 DFHILDSLKRSWQCGTIQLDFQFPEKFDLSYIGEDNQKHRPVVIHRAVFGSIERFIGILT 525

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E++ G  P+WL+P+Q ++  ++   ++Y+ ++   L++  + +  D RNE + YKIRE  
Sbjct: 526 EHYGGAFPMWLAPVQVMIIPVSDHYIDYSLKVKKRLENAGIRVNVDVRNEKLGYKIREAG 585

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           + K P  ++ G+KE     + +R+ G     ++++   I  L  E
Sbjct: 586 LLKTPYTLVLGEKEMDSDHVSVRKRGEGELGEIAIDQVIERLRNE 630


>gi|332184284|gb|AEE26538.1| Threonyl-tRNA synthetase [Francisella cf. novicida 3523]
          Length = 634

 Score =  661 bits (1705), Expect = 0.0,   Method: Composition-based stats.
 Identities = 302/643 (46%), Positives = 429/643 (66%), Gaps = 16/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            I + FPDGSI+ F       D+A+SIS SLAK  VAV I+G++ D  D +  +  + +I
Sbjct: 1   MINIKFPDGSIREFESGVNSLDIAKSISPSLAKVTVAVYIDGQLKDAKDTINSDCELRLI 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +DP  L ++RHSCAH++A AV+ ++P  +V IGP++++GFYYDF  ++     +LA I
Sbjct: 61  TLKDPEGLEILRHSCAHLLAHAVKELYPNTEVTIGPVVDNGFYYDFSFKEAIGEADLAAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EKKM+E+  + +P   + +   +A E F+++ E YKVEI++SI A E V +Y Q  + DL
Sbjct: 121 EKKMKELAKKSTPVSYRVVPKAEAIEFFKAQGENYKVEIIDSI-ADEQVKIYTQDNFSDL 179

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ +T  +K F KL K+AGAYWRG+SN  ML+RIYGT W T+++L QYL  LEE+E
Sbjct: 180 CRGPHIPNTSVLKAF-KLTKLAGAYWRGNSNNEMLTRIYGTCWATKEDLDQYLNMLEEAE 238

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KRDHRK+ + +DLFH  ED  G+ FWH  G +I++ +  YMR    K    EI TP + D
Sbjct: 239 KRDHRKIGKVLDLFHFQEDSPGIAFWHDNGVRIWRQVEDYMRASNNKYGCSEIRTPLIAD 298

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             LW++SGH   Y  NMFA K       + R FA++PMNCP  V V+N  L SYR+LP+R
Sbjct: 299 FSLWEKSGHASKYAENMFATK------SENRDFAIRPMNCPTCVQVYNTKLHSYRDLPIR 352

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AEFG V+RNEPSGSLHGL+RVR FTQDD H+FCT EQ+  E + +      +YKDFGF 
Sbjct: 353 MAEFGIVHRNEPSGSLHGLLRVRSFTQDDGHIFCTPEQVEEEVILMVQQCFEVYKDFGFN 412

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              VK++ RPE R+G D  WD +E ++K  LD       + ++  +L GEGAFYGPK E+
Sbjct: 413 DFAVKIALRPENRIGDDETWDKSEQMLKNALDA------NNVSYELLPGEGAFYGPKIEF 466

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            LKDAIGR WQCGTIQ+DF++P R  A Y++ + +K  PVM+HRA+ GS+ERFIG++IE+
Sbjct: 467 HLKDAIGRSWQCGTIQLDFSMPQRLGATYIDKNGDKQVPVMLHRAIVGSLERFIGMLIEH 526

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + GNLPLWL+P Q  V  I+++  +Y +E+  +L+ + +  + D RNE I +KIREH++ 
Sbjct: 527 YAGNLPLWLAPFQVAVMGISNNQDDYCKEVFTMLEKNGIRTKLDLRNEKIGFKIREHTLL 586

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           ++P ++I G  E  ++ I IR+       ++S+ D    L K+
Sbjct: 587 RVPYLVILGKNEQEQKIITIRKHSGEDLGQMSVDDFCAFLDKQ 629


>gi|228908133|ref|ZP_04071981.1| Threonyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
 gi|228851551|gb|EEM96357.1| Threonyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
          Length = 640

 Score =  661 bits (1705), Expect = 0.0,   Method: Composition-based stats.
 Identities = 273/644 (42%), Positives = 431/644 (66%), Gaps = 17/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEII 62
            I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N  + DL   + E   +EII
Sbjct: 5   MIEIKFPDGSVKEFGKGITLEEIAGSISSSLKKKAVAGKVNDGLYDLRGNIEENAEVEII 64

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +    + + RHS AHI+A+AV+ ++ ++ + +GP+IE+GFYYD D     + ++L +I
Sbjct: 65  TIDSNEGVEIARHSAAHILAQAVKRLYGDINLGVGPVIENGFYYDMDLPSSVNVEDLRKI 124

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M++II  +    +  +S E+A +LF+   ++ K+E+LE+IP+ E+VTLY+QGE+ DL
Sbjct: 125 EKEMKKIINENIKIERVEVSREEAAKLFQEIDDSLKLELLEAIPSGESVTLYKQGEFVDL 184

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ STG +K F     V+GAYWRGDSN  +L RIYG A+++Q+EL +YL+F+EE+ 
Sbjct: 185 CRGPHLPSTGYLKAFQLTH-VSGAYWRGDSNNQVLQRIYGVAFSSQKELEEYLHFVEEAA 243

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KR+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R  + + +Y+E+ TP +++
Sbjct: 244 KRNHRKLGNELELFMFSEEAPGMPFYLPKGQMIRNELEAFLRGIQKEYNYQEVRTPFMMN 303

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           Q +W++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R
Sbjct: 304 QEVWERSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIR 357

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           + EFG V+R+E SG+L+GL+RVR F QDDAH+F T +Q+ +E   +   I  +YK FGFE
Sbjct: 358 MCEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPKQIEDEIKSVMAQIDYVYKTFGFE 417

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPE  +G D LW+ AE  ++ VL ++           +  G+GAFYGPK ++
Sbjct: 418 Y-EVELSTRPEDSMGDDKLWEQAEAALENVLQSLNY------KYRLNEGDGAFYGPKIDF 470

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+ R  QCGTIQ+DF +P +F+  Y++ +++K  PV+IHRAV GS++RF+ I+IE+
Sbjct: 471 HIKDALNRSHQCGTIQLDFQMPEKFDLNYIDENNDKKRPVVIHRAVLGSLDRFLAILIEH 530

Query: 542 FKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           F G  P W++P+Q  V  ++++   +Y  E+A+ L    + +E D R+E + YKIRE  +
Sbjct: 531 FGGAFPAWVAPVQVKVIPVSNAVHEQYCSEVAHKLAQAGVRVEQDARDEKLGYKIREAQM 590

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +K+P +++ GDKE    ++ +R++    ++ V +   +  + +E
Sbjct: 591 QKVPYVLVIGDKEMESGAVNVRKYAEEKSEVVEIDVFVATIEEE 634


>gi|227537393|ref|ZP_03967442.1| threonine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300]
 gi|227242771|gb|EEI92786.1| threonine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300]
          Length = 641

 Score =  661 bits (1705), Expect = 0.0,   Method: Composition-based stats.
 Identities = 273/651 (41%), Positives = 401/651 (61%), Gaps = 19/651 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            IK+T PDGS++ +    + + VA SIS  LA+  +A  +NG++ D S P+  + S++++
Sbjct: 1   MIKITLPDGSVREYEKGTSAAQVALSISEGLARNVLAAEVNGEIWDASRPIEQDSSLKLL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
           T  D +  +   HS AH+MAEA+++++P V+  IGP IE GFYYD D  ++ FSSDE  Q
Sbjct: 61  TWNDDKGKSTFWHSSAHLMAEALEALYPGVKFGIGPAIETGFYYDVDFGDREFSSDEFKQ 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE KM E+  R   F ++ +S  +A + F  K + YK+++++ +     +T Y QG++ D
Sbjct: 121 IEDKMLELAKRKEVFERKAVSKAEALDYFTEKGDEYKLDLIKDL-EDGKITFYSQGDFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ +TG +K   KL  VAGAYWRGD +R  L+RIYG  +    ELT YL F+EE+
Sbjct: 180 LCRGPHIPNTGFIK-AIKLTNVAGAYWRGDESRKQLTRIYGVTFPKASELTDYLKFIEEA 238

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           +KRDHRKL +E++LF  +E    G+  W  KG  + Q LI +M+R ++K  YE + TP +
Sbjct: 239 KKRDHRKLGKELELFAFSEKVGMGLPLWLPKGAALRQKLIDFMQRAQLKAGYEPVVTPHI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             + L+  SGH++ Y  + F       T  +   F LKPMNCP H  ++    +SY++LP
Sbjct: 299 GHKQLYVTSGHYEKYGEDSFQ---PIKTPVEGEEFFLKPMNCPHHCEIYKTKPRSYKDLP 355

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           VR AEFG+VYR E SG LHGL RVRGFTQDDAH+FC  +Q+  E  K+ +L++ ++   G
Sbjct: 356 VRFAEFGTVYRYEQSGELHGLTRVRGFTQDDAHLFCRPDQVKEEFKKVIDLVLYVFGALG 415

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           FE  + ++S R  +     +GSD  W  AE  +    D      +  + T V  GE AFY
Sbjct: 416 FEDYIAQVSLRDPENRTKYIGSDENWVLAERAIIEAAD------EKGLPTVVEYGEAAFY 469

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDA+GR WQ GTIQVD+NLP RF   Y  S + K  PVMIHRA FGS+ERFI
Sbjct: 470 GPKLDFMVKDALGRKWQLGTIQVDYNLPERFELEYTGSDNAKHRPVMIHRAPFGSLERFI 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE+  G  PLWL+P Q IV  ++    EYAQ++   L +  +    D R+E +  KI
Sbjct: 530 AVLIEHCAGRFPLWLAPEQFIVLPVSEKYEEYAQKLLESLNNSDIRGLIDLRDEKVGRKI 589

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           R+  +KK+P ++I G+KEA   ++ +R+ GS     ++  +   +L KE  
Sbjct: 590 RDAEVKKLPYMLIVGEKEAESGTVSVRKHGSGDVGSMTPEEFREVLIKEIT 640


>gi|291557532|emb|CBL34649.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Eubacterium
           siraeum V10Sc8a]
          Length = 639

 Score =  661 bits (1705), Expect = 0.0,   Method: Composition-based stats.
 Identities = 284/644 (44%), Positives = 405/644 (62%), Gaps = 17/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+T  DGS+K      +  DVA+ IS  LAK A    I+G++ DL   +  + ++EI+
Sbjct: 1   MIKVTLKDGSVKELESACSVFDVAKEISSRLAKAACVAKIDGEIKDLRTVIDSDCTLEIL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D       RH+ +HI+A+AV+ ++PEV++AIGP I++GFYYDFDK+ PF  ++L  I
Sbjct: 61  TFDDEDGKKAFRHTASHILAQAVKRLYPEVKLAIGPAIDNGFYYDFDKDTPFMPEDLEAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-ENVTLYRQGEWFD 181
           E +M++I+  D    +  ++   A +  +   E YKVE+ E    K E ++ Y+QGE+ D
Sbjct: 121 EAEMKKIVKEDLKLEQFEMAPADAIKYLKEIDEPYKVELCEEHAGKNEPISFYKQGEFTD 180

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LC GPH+ STG VK F KL    GAYWRG     MLSRIY TA+    EL  YL  +EE+
Sbjct: 181 LCAGPHLMSTGYVKAF-KLTSCTGAYWRGSEKNKMLSRIYATAFPKASELEAYLNMIEEA 239

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           +KRDHRKL +E++LF I ++G G  F+  KG  +  TLI Y R+   +D Y EI+TP +L
Sbjct: 240 KKRDHRKLGKELELFTIMDEGPGFPFFLPKGMTLKNTLIDYWRQIHTRDGYVEISTPIML 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ LW+ SGHWD Y+ NM+       T+ D   FA+KPMNCPG + V+    +SYR+LP+
Sbjct: 300 NRQLWETSGHWDHYKENMYT------TVIDDTEFAIKPMNCPGGILVYKSKPRSYRDLPI 353

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+ E G V+R+E SG+LHGLMRVR FTQDDAH+F T +Q+ +E   +  LI  +YK FGF
Sbjct: 354 RMGELGLVHRHEKSGALHGLMRVRCFTQDDAHIFMTPDQITDEIKGVVRLIDEVYKLFGF 413

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           +   V+LST+PE  +GS   WD A   ++  LD++       +   V  G+GAFYGPK +
Sbjct: 414 KYH-VELSTQPEDSMGSQEDWDMATEGLRKALDSLG------LPYVVNEGDGAFYGPKID 466

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           + L+D++GR WQCGTIQ+DF LP RF   Y  +  EK  P+MIHR VFGSIERFIGI+ E
Sbjct: 467 FHLEDSLGRTWQCGTIQLDFQLPMRFELEYTGADGEKHRPIMIHRVVFGSIERFIGILTE 526

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +F G  P+WL+P+Q  +  I     E+  ++A  LK   + +E D R+E I +KIRE  +
Sbjct: 527 HFAGAFPIWLAPVQVELMPIADRHNEFTSKVAAELKKRGIRVEVDGRSEKIGFKIREAQL 586

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +KIP +++ GDKE    ++ IR         +S+ D   ++ KE
Sbjct: 587 QKIPYMLVIGDKEVETENVSIRCRKRGDIGTMSVADFCDMVEKE 630


>gi|325279133|ref|YP_004251675.1| threonyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712]
 gi|324310942|gb|ADY31495.1| threonyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712]
          Length = 650

 Score =  661 bits (1705), Expect = 0.0,   Method: Composition-based stats.
 Identities = 265/650 (40%), Positives = 402/650 (61%), Gaps = 20/650 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            IK+ FPDG++K F    TG D+A  IS  LAK+ +++++NG++ DL+ P+  +  I++ 
Sbjct: 1   MIKIKFPDGNVKEFESGVTGLDIARGISSKLAKEVLSISVNGEIWDLTRPITADAEIKLF 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ--PFSSDELA 120
           T +D        HS AH+MAEA+Q ++P  +  IGP IE+GFYYD D  +    +  +L 
Sbjct: 61  TWDDQEGKHAFWHSSAHLMAEALQQLYPNTKFGIGPAIENGFYYDIDPGEGVVLTDKDLE 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEKKM E+  +   + +  +S ++A E F S  E YKVE++  +     +T YRQG + 
Sbjct: 121 TIEKKMLELARQKEEYCRINVSKQEALEHFNSINETYKVELINDL-EDGKITYYRQGSFT 179

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+  T  +K   KL  +AGAYWRG+ +  ML+RIYG  +  Q+ L ++L  +EE
Sbjct: 180 DLCRGPHLPDTSYIK-AIKLTGLAGAYWRGNEHNKMLTRIYGITFPKQKMLDEWLVLMEE 238

Query: 241 SEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           +++RDHRK+ +EM+LF      G+G+  W  KG  +   L  ++R+ + K  Y+++ TP 
Sbjct: 239 AKQRDHRKIGKEMELFTFSQAVGAGLPMWLPKGAMLRDRLEGFLRKVQKKYGYQQVITPH 298

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           + + +L++ SGH+  Y  + F V     T ++   F LKPMNCP H  ++    +SY++L
Sbjct: 299 IGNVNLYKTSGHYQKYGKDSFQVIT---TPQEGEEFMLKPMNCPHHCEIYKFKPRSYKDL 355

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R AEFG+VYR E SG LHGL RVRGFTQDDAH+FCT +Q+  E  K+ ++I +I+K  
Sbjct: 356 PLRFAEFGTVYRYEQSGELHGLTRVRGFTQDDAHLFCTPDQLKEEFKKVIDIIFTIFKAL 415

Query: 419 GFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            F+    ++S R  K     +G+D  W+ AE  +    +      +  + T V LGE AF
Sbjct: 416 DFKDFTAQVSLRDPKNTEKYIGTDENWEKAERAIIEAAE------EKGLKTTVELGEAAF 469

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK ++++KDAIGR WQ GTIQVD+NLP RF+  Y  + + K  PVMIHRA FGS+ERF
Sbjct: 470 YGPKLDFMVKDAIGRKWQLGTIQVDYNLPERFDLEYTGADNLKHRPVMIHRAPFGSMERF 529

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
           + ++IE+  G  PLWL+P Q +V  I+    +YAQ++++LL +  +    D RNE I  K
Sbjct: 530 VAVLIEHTGGKFPLWLAPDQVVVMPISEKFNDYAQKLSDLLNNSDIRTVLDDRNEKIGRK 589

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IR++ +KKIP ++I G+ E +  ++ +RR G      +S+ D I  + +E
Sbjct: 590 IRDNELKKIPYLLIVGENEMNNNTVSVRRQGQGDMGTMSVEDFISKINEE 639


>gi|254373138|ref|ZP_04988627.1| threonine-tRNA ligase [Francisella tularensis subsp. novicida
           GA99-3549]
 gi|151570865|gb|EDN36519.1| threonine-tRNA ligase [Francisella novicida GA99-3549]
          Length = 634

 Score =  661 bits (1705), Expect = 0.0,   Method: Composition-based stats.
 Identities = 301/643 (46%), Positives = 426/643 (66%), Gaps = 16/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            I + FPDGSI+ F       DVA+SIS SLAK  VA  I+ ++ D  D +     + +I
Sbjct: 1   MINIRFPDGSIREFEAGVNSLDVAKSISPSLAKATVAAYIDDQLKDAKDAINSNCELRLI 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +DP  L ++RHSCAH++A AV+ ++P  +V IGP++++GFYYDF  ++     +L  I
Sbjct: 61  TVKDPEGLEILRHSCAHLLAHAVKELYPNTEVTIGPVVDNGFYYDFSFKESIGEADLPTI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EKKM+E+  + +P   + +   +A E F+++ E YKVEI++SI A E V +Y Q  + DL
Sbjct: 121 EKKMKELAKKSAPVSYRVVPKAEAIEFFKAQGENYKVEIIDSI-ADEQVKIYTQDNFSDL 179

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ +T  +K F KL K+AGAYWRG+S+  ML+RIYGT W T+++L QYL  LEE+E
Sbjct: 180 CRGPHIPNTSVLKAF-KLTKLAGAYWRGNSDNEMLTRIYGTCWATKEDLEQYLNMLEEAE 238

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KRDHRK+ + +DLFH  ED  G+ FWH  G +I++ +  YMR    K    EI TP + D
Sbjct: 239 KRDHRKIGKVLDLFHFQEDSPGIAFWHDNGVRIWRQVEDYMRASNNKYGCSEIRTPLIAD 298

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             LWQ+SGH   Y  NMFA K       + R FA++PMNCP  V V+N  L SYR+LP+R
Sbjct: 299 FSLWQKSGHASKYAENMFATK------SENRDFAIRPMNCPTCVQVYNTKLHSYRDLPIR 352

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AEFG V+RNEPSGSLHGL+RVR FTQDD H+FCT EQ+  E + +      +YKDFGF 
Sbjct: 353 MAEFGIVHRNEPSGSLHGLLRVRSFTQDDGHIFCTPEQVEEEVILMVQQCFEVYKDFGFN 412

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              VK++ RPE R+G D  WD +E ++K  LD       + ++  +L GEGAFYGPK E+
Sbjct: 413 DFAVKIALRPENRIGDDETWDKSEQMLKNALDA------NNVSYELLPGEGAFYGPKIEF 466

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            LKDAIGR WQCGTIQ+DF++P R  A Y++ + EK  PVM+HRA+ GS+ERFIG++IE+
Sbjct: 467 HLKDAIGRSWQCGTIQLDFSMPQRLGATYIDKNGEKQVPVMLHRAIVGSLERFIGMLIEH 526

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + GNLPLWL+P+Q  V  I+++  +Y +E+  +L+ + +  + D RNE I +KIREH++ 
Sbjct: 527 YAGNLPLWLAPVQVAVMGISNNQDDYCKEVFTMLEKNGIRAKLDLRNEKIGFKIREHTLL 586

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           ++P ++I G  E  ++ I IR+       ++S+ D    L K+
Sbjct: 587 RVPYLVILGKNEQEQKIITIRKHSGEDLGQMSVDDFCAFLDKQ 629


>gi|254447322|ref|ZP_05060789.1| threonyl-tRNA synthetase [gamma proteobacterium HTCC5015]
 gi|198263461|gb|EDY87739.1| threonyl-tRNA synthetase [gamma proteobacterium HTCC5015]
          Length = 637

 Score =  661 bits (1704), Expect = 0.0,   Method: Composition-based stats.
 Identities = 294/641 (45%), Positives = 436/641 (68%), Gaps = 15/641 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDG+ K F    +  +VA+SI   LAK  +A  +NG++ D   P+  +  ++IIT  
Sbjct: 4   ITLPDGTQKPFDAPVSTLEVAQSIGPGLAKATIAGRVNGQLRDAKLPIVEDAELQIITDR 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHS AH+M  AV+ ++PE ++AIGP+I+ GFYYD D E+PF+ +++  IE++
Sbjct: 64  DAEGLEIIRHSFAHLMGHAVKQLYPEAKMAIGPVIDYGFYYDIDYERPFTPEDVEAIEQR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           ++ +  +D        + ++A + F+ + E YKVEI   IP  E V LY   E+ D+CRG
Sbjct: 124 IKALTKKDYEVEVVVSNPQEAVDTFKQRDEPYKVEIASEIPEGEEVKLYHHEEYTDMCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +T  ++ F KLM VAGAYWRGDS+  ML RIYGTAW  +++L  +L  LEE+EKRD
Sbjct: 184 PHVPNTRHLRHF-KLMSVAGAYWRGDSDNKMLQRIYGTAWTNKKDLKAHLTMLEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHL 304
           HRKLA+ +DLFH+ E+  G++FWH KGW+I+  +  Y+R+ + + DY+E++TPQV+D+ L
Sbjct: 243 HRKLAKSLDLFHMQEEAPGMVFWHDKGWQIYVQVQDYIRQLLRQHDYQEVHTPQVVDRVL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHWD +   +F       T  + R +A+KPMNCP HV ++N GLKSYR+LP+R+AE
Sbjct: 303 WEKSGHWDKFGDMIF------STHSENRDYAVKPMNCPCHVQIYNQGLKSYRDLPLRMAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNEPSG+LHGLMRVR F QDDAH+FCT++Q+ +E     +L+  +YKDFGFE++ 
Sbjct: 357 FGSCHRNEPSGTLHGLMRVRNFVQDDAHIFCTEDQIQSEVSAFIDLVFQVYKDFGFEEVQ 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           V LSTRPE+RVG DALWD AEN ++  L+         ++  +  GEGAFYGPK E+ LK
Sbjct: 417 VALSTRPEERVGEDALWDKAENALEVALN------NKDLDFTLQPGEGAFYGPKIEFALK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D +GR WQCGTIQVDF++P+R  A YV     +  PVM+HRA+ GS+ERFIGI+IE  +G
Sbjct: 471 DCLGRVWQCGTIQVDFSMPTRLEADYVAEDGSRKTPVMLHRAILGSLERFIGILIEEHEG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P+WL+P+QA +  IT    ++ ++    L++  L + +D RNE I +KIREH+++++P
Sbjct: 531 RFPVWLAPVQAAILNITDKQADFVEKARQTLENQGLRVVSDLRNEKIGFKIREHTLQRVP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
            + + GD+E    S+ +R         +++ +A+ ++ + +
Sbjct: 591 YLFVVGDREVENESVAVRTRSGEDLGTMTVDEAVQLIKRAA 631


>gi|325661884|ref|ZP_08150505.1| threonyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA]
 gi|325471862|gb|EGC75079.1| threonyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA]
          Length = 643

 Score =  661 bits (1704), Expect = 0.0,   Method: Composition-based stats.
 Identities = 281/642 (43%), Positives = 407/642 (63%), Gaps = 16/642 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K+T  DGS+K +    +  ++A  IS  LA+ A A  ++G+V DL   + ++  + I T
Sbjct: 1   MKITLKDGSVKEYSEAKSVYEIAADISEGLARMATAGEVDGEVIDLRTKIDQDCELTIHT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            + P      RH+ +HI+A+AV+ ++P+ ++AIGP I+DGFYYDFD+E PF++++L  IE
Sbjct: 61  FQSPEGAHAFRHTTSHILAQAVKRLFPDTKLAIGPAIDDGFYYDFDREVPFTTEDLETIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M++I+  D    +  L  E+A  L + K+E YKVE++E +P    ++ Y+QGE+ DLC
Sbjct: 121 KEMKKIVKEDLKIEQFTLPREEAIALMKEKEEPYKVELIEDLPEDAVISFYKQGEFTDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+ ST  VK F KL  +AGAYWRG     ML+RIYGT++  + +L +YL  +EE++K
Sbjct: 181 AGPHLLSTKSVKAF-KLTSLAGAYWRGSEKNKMLTRIYGTSFTKKADLDEYLAKIEEAKK 239

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           RDHRKL +E+ LF I E+G G   +  KG  +  TLI Y R    +  Y EI+TP +L++
Sbjct: 240 RDHRKLGKELGLFTILEEGPGFPIFLPKGMILKNTLIDYWREVHTRAGYVEISTPIMLNR 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW  Y+ NM+       T+ D   FA+KPMNCPG + V+     SYR+LP+R+
Sbjct: 300 QLWETSGHWAHYKENMYT------TVIDEEDFAIKPMNCPGGILVYKTEPHSYRDLPLRM 353

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            E G+V+R+E SG+LHGLMRVR FTQDDAH+F T+EQ+ +E   +  LI  +Y  FGF+ 
Sbjct: 354 GELGTVHRHEKSGALHGLMRVRSFTQDDAHIFMTREQIKDEIKGVARLIDEVYSLFGFKY 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LST+PE  +GS   WD A + ++  LD ++      +   +  G+GAFYGPK ++ 
Sbjct: 414 H-VELSTKPEDSMGSQEDWDIATDALRSALDELQ------LPYVINEGDGAFYGPKIDFH 466

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+D +GR WQCGTIQ+DF LP RF   Y+ +  EK  P+M+HR VFGSIERFIGI+IE+F
Sbjct: 467 LEDTLGRTWQCGTIQLDFQLPLRFEMEYIAADGEKHRPIMVHRVVFGSIERFIGILIEHF 526

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P Q  V  I+    EYA E+A  LK   +    D R+E I YKIR+  + K
Sbjct: 527 AGAFPTWLAPEQVKVLPISEKYHEYANEVAAKLKEAKIRCSVDERSEKIGYKIRDARLNK 586

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IP +++ G KE  E  + +R        + SL   I  +T+E
Sbjct: 587 IPYMLVVGAKEQEEGVVSVRSRFLGDEGQRSLDTFIAEITEE 628


>gi|322388243|ref|ZP_08061847.1| threonine--tRNA ligase [Streptococcus infantis ATCC 700779]
 gi|321140915|gb|EFX36416.1| threonine--tRNA ligase [Streptococcus infantis ATCC 700779]
          Length = 647

 Score =  661 bits (1704), Expect = 0.0,   Method: Composition-based stats.
 Identities = 263/651 (40%), Positives = 410/651 (62%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  +  +GSIEI+
Sbjct: 1   MIKITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGSIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQ 121
           TP+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D +    S+++L +
Sbjct: 61  TPDHEDALDILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNQAGQISNEDLPR 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWF 180
           IE++MQ+I+  + P +++ ++ ++ARE+F+   + YK+E++E     E  +T+YRQGE+ 
Sbjct: 121 IEEEMQKIVKENFPSIREEVTKDEAREIFK--NDPYKLELIEEHSEDEGGLTIYRQGEYV 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ RIYGTAW  +++L  YL   EE
Sbjct: 179 DLCRGPHVPSTGRIQIFHLLH-VAGAYWRGNSDNAMMQRIYGTAWFDKKDLKNYLQMREE 237

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           +++RDHRKL +E+DLF I+++   G+ FW   G  I + L  Y+  +++   Y+ + TP 
Sbjct: 238 AKERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVDKELASGYQHVYTPP 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L++ SGHWD Y+ +MF          D   F L+PMNCP H+ VF H + SYREL
Sbjct: 298 LASVELYKTSGHWDHYQEDMFPTMDMG----DGEEFVLRPMNCPHHIQVFKHHVHSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y+DF
Sbjct: 354 PIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYEDF 413

Query: 419 GFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
              +   +LS R      K   +D +W++A+ +++  LD +       ++     GE AF
Sbjct: 414 NLNEYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAF 467

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K A+G++    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF
Sbjct: 468 YGPKLDIQVKTALGKEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMIHRGVISTMERF 527

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
             I+IEN+KG  P WL+P Q  +  ++    V+YA E+A  L+   +  + D RNE + +
Sbjct: 528 TAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAKKLRDRGVRADVDERNEKMQF 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR    +KIP  +I GDKE  + ++ +RR+G   T  VS+ + +  +  +
Sbjct: 588 KIRASQTQKIPYQLIVGDKEMEDGTVNVRRYGQKETNTVSVDEFVATILAD 638


>gi|317129892|ref|YP_004096174.1| threonyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
 gi|315474840|gb|ADU31443.1| threonyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
          Length = 645

 Score =  661 bits (1704), Expect = 0.0,   Method: Composition-based stats.
 Identities = 253/651 (38%), Positives = 401/651 (61%), Gaps = 19/651 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M   I +TFPDG+ K F    T  D+A SIS  L K A+A  ++G+  DL  P+   G++
Sbjct: 1   MSDQIVMTFPDGAKKEFSKGVTTEDIAGSISPGLKKNALAGKVDGQYVDLRQPLVENGNL 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT +    L ++RHS AH+MA+AV+ ++  V++ +GP+IE GFYYD D E   + ++L
Sbjct: 61  EIITYDSQDGLEILRHSTAHLMAQAVKRLYENVKLGVGPVIEGGFYYDIDMEHSLTPEDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IEK+M+ I+  +    +  +S E A + ++   +  K+E+LE IP  + +++Y QGE+
Sbjct: 121 EKIEKEMKRIVDENLEIRRVEVSRETAVQRYKEIGDDLKLELLEDIPEGDTISIYEQGEF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRG H+ ST ++KKF KLM V GAYWRGDS   ML RIYGTA+  QQ+L  +L  LE
Sbjct: 181 FDLCRGVHLPSTSKIKKF-KLMTVNGAYWRGDSKNKMLQRIYGTAFPKQQQLEDHLKMLE 239

Query: 240 ESEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           E+++RDHRKL +E+ +F I  + G G+  W  KG  I +T+  Y+    +   Y+ + TP
Sbjct: 240 EAKERDHRKLGKELGIFTINQKVGQGLPLWLPKGATIRRTIERYIVDLEERLGYDHVYTP 299

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    L++ SGHWD Y  +MF     D+         L+PMNCP H+ ++ + L SYR 
Sbjct: 300 VLGSVELYKTSGHWDHYHEDMFPTMEMDN-----EDLVLRPMNCPHHMMIYKNQLHSYRN 354

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LPVR+AE G+++R+E SG+L GL RVR  T +DAH+FC  +Q+ +E +++  L+ ++Y+D
Sbjct: 355 LPVRIAELGTMHRHEMSGALAGLQRVRAMTLNDAHIFCRPDQLKDEFIRVVELVQNVYQD 414

Query: 418 FGFEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           FG +    +LS R      K V +D +W+ A+ ++K  ++ +       ++     GE A
Sbjct: 415 FGIDDYYFRLSYRDPEDKEKYVDNDEMWEKAQAMLKEAMEDMN------VDYVEAEGEAA 468

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  +K A+G+D    T+Q+DF+LP+RF   YV    ++  PV+IHR V  ++ER
Sbjct: 469 FYGPKLDVQVKTALGKDETLSTVQLDFHLPNRFELAYVGEDGKEHRPVVIHRGVVSTMER 528

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           F+  +IE +KG  P WL+P+Q  V  ++   ++Y + + + LK   + +  D R+E + Y
Sbjct: 529 FVAFLIEEYKGAFPTWLAPVQVEVIPVSEVHMDYVRRVEDKLKQAGVRVHVDVRDEKLGY 588

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIRE  ++KIP I++ GDKE    ++ +R++G   ++ V L + +  + +E
Sbjct: 589 KIREAQMQKIPYILVLGDKEIEASTVNVRKYGQKDSEAVGLDEFVSSMKEE 639


>gi|52081397|ref|YP_080188.1| threonyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52786773|ref|YP_092602.1| threonyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|319647305|ref|ZP_08001527.1| threonyl-tRNA synthetase 1 [Bacillus sp. BT1B_CT2]
 gi|52004608|gb|AAU24550.1| threonyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52349275|gb|AAU41909.1| ThrS [Bacillus licheniformis ATCC 14580]
 gi|317390652|gb|EFV71457.1| threonyl-tRNA synthetase 1 [Bacillus sp. BT1B_CT2]
          Length = 643

 Score =  661 bits (1704), Expect = 0.0,   Method: Composition-based stats.
 Identities = 266/653 (40%), Positives = 417/653 (63%), Gaps = 20/653 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M   +K+ FPDG++K F    T  D+A SIS  L KKA+A  +NGK  DL  P+  +G+I
Sbjct: 1   MSDMVKIKFPDGAVKEFAKATTTEDIAASISPGLKKKAIAGKLNGKEIDLRAPILEDGAI 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT     +L ++RHS AH+MA+A++ ++  V++ +GP+IE+GFYYD D E+  + ++L
Sbjct: 61  EIITEGSEEALEIMRHSTAHLMAQAIKRLYKNVKLGVGPVIENGFYYDVDLEEALTPEDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IEK+M++I+  + P +++ +S E+AR LF    +  K+E+L++IP  E V++Y QGE+
Sbjct: 121 PKIEKEMKKIVGENLPIVRKEVSREEARALFAEIGDDLKLELLDAIPEGETVSIYEQGEF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRG HV STG++K+F KL+ +AGAYWRGDSN  ML RIYGTA+  + EL ++L  LE
Sbjct: 181 FDLCRGVHVPSTGKIKEF-KLLSLAGAYWRGDSNNKMLQRIYGTAFFKKAELEEHLRLLE 239

Query: 240 ESEKRDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTP 297
           E+++RDHRKL +E+ LF +  + G G+  W  KG  I + +  Y+  +++   YE + TP
Sbjct: 240 EAKERDHRKLGKELKLFANSQKVGQGLPLWLPKGATIRRVIERYIVDKELALGYEHVYTP 299

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +  + L++ SGHWD Y+  MF     D+      T  L+PMNCP H+ ++ + + SYRE
Sbjct: 300 VLGSKDLYETSGHWDHYQDGMFPPMEMDN-----ETLVLRPMNCPHHMMIYKNDIHSYRE 354

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+ +E ++   LI  +Y+D
Sbjct: 355 LPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKDEFIRTVRLIQDVYED 414

Query: 418 FGFEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           FG E+   +LS R      K    D +W+ A++++K  +D I +      +     GE A
Sbjct: 415 FGLEEYSFRLSYRDPEDTEKYYDDDEMWNKAQSMLKEAMDEIGH------DYYEAEGEAA 468

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  +K AIG++    T+Q+DF LP +F+  YV    +   PV+IHR V  ++ER
Sbjct: 469 FYGPKLDVQVKTAIGKEETLSTVQLDFLLPEKFDLTYVGEDGKPHRPVVIHRGVVSTMER 528

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETIN 592
           F+  +IE  KG LP WL+P+Q  V  ++ S  ++YA+++   L+   L +E D R+E I 
Sbjct: 529 FVAFLIEEHKGALPTWLAPVQFQVIPVSPSVHLDYAKKVQERLQREGLRVEVDTRDEKIG 588

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           YKIRE  ++KIP +++ GD+E    ++ +R++G   ++ V++ D I     E+
Sbjct: 589 YKIREAQMQKIPYMLVVGDQEVENEAVNVRKYGEQKSETVAIADFIKKAVAEA 641


>gi|157803434|ref|YP_001491983.1| threonyl-tRNA synthetase [Rickettsia canadensis str. McKiel]
 gi|166225493|sp|A8EXW5|SYT_RICCK RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|157784697|gb|ABV73198.1| threonyl-tRNA synthetase [Rickettsia canadensis str. McKiel]
          Length = 635

 Score =  661 bits (1704), Expect = 0.0,   Method: Composition-based stats.
 Identities = 318/644 (49%), Positives = 435/644 (67%), Gaps = 15/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEII 62
            I ++  DGS++ F    T  +VA +IS SLAK+A+   ING++ DLS  +     + I+
Sbjct: 1   MINISLSDGSVRQFEKGMTIYEVANAISMSLAKQAIVAEINGELKDLSTVIENNCKLRIL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +DP  L +IRH  AH+ AEAV+ ++PE QV IGP IE+G+YYDF +++PF+ D+LA I
Sbjct: 61  TAKDPECLEIIRHDAAHLTAEAVKELFPETQVTIGPAIENGYYYDFARDKPFTVDDLAVI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E KMQE+  ++    ++  + +KA E F S  E YK EI+ SIP  E +TLYRQG + DL
Sbjct: 121 EAKMQELAKKNEKVTRELWNRDKAIEFFRSIGEHYKAEIIASIPTDEPITLYRQGNFIDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH  STG VK F KLMKVAG+YWRGDS   +L RIYGTAW T+++L  YL+ LEE+E
Sbjct: 181 CRGPHAPSTGFVKYF-KLMKVAGSYWRGDSRNQVLQRIYGTAWATKEQLDHYLFMLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD 301
           KRDHRKL RE+DLFH  E+  G++FWH KGW I+  +  Y+R+KI+ + Y E+ TP ++D
Sbjct: 240 KRDHRKLGRELDLFHFQEEAQGMVFWHDKGWSIYNIVEQYIRKKIRKNGYTEVKTPVLVD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW+ +R NMFA++       D +  ALKPMNCP HV +F  G+KSYR+LP+R
Sbjct: 300 KRLWEASGHWEKFRDNMFALE------ADNKILALKPMNCPCHVQIFKQGIKSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           ++EFG  +RNE SG+LHGLMRVR   QDDAH+FC +EQ+ +E +    L+  +YKDFGF 
Sbjct: 354 MSEFGLCHRNEASGALHGLMRVRSLVQDDAHIFCAEEQITDETVSFCKLLTEVYKDFGFT 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            I VK S RPE R GSD +WD AEN +K  ++             +  GEGAFYGPK E+
Sbjct: 414 DIKVKFSDRPEIRAGSDEVWDKAENALKEAVEKAG------FTYTLNPGEGAFYGPKLEF 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
           +L DAIGR WQCGT+Q+DF L  + +A YV +  EK  PVM+HRA+ GS+ERFIGI+IE 
Sbjct: 468 VLTDAIGRQWQCGTLQMDFVLLEQLDASYVAASGEKKRPVMLHRAILGSLERFIGILIEE 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  PLWL+P+Q  + TITS   +YA  +   L  + +  + +   + INYKIRE S  
Sbjct: 528 YAGCFPLWLAPVQVAIATITSDLNDYALAVQKALIDNGVRTDINISPDKINYKIREFSNH 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           K+P+I I G KE   + + IRR G+T  Q +S+   I ++++E+
Sbjct: 588 KVPLIAIIGKKEKENKQVTIRRLGTTDQQVLSVKQLITLISEEN 631


>gi|15837338|ref|NP_298026.1| threonyl-tRNA synthetase [Xylella fastidiosa 9a5c]
 gi|22654146|sp|Q9PFE2|SYT_XYLFA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|9105624|gb|AAF83546.1|AE003915_11 threonyl-tRNA synthetase [Xylella fastidiosa 9a5c]
          Length = 635

 Score =  661 bits (1704), Expect = 0.0,   Method: Composition-based stats.
 Identities = 297/647 (45%), Positives = 427/647 (65%), Gaps = 17/647 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAING-KVCDLSDPVR-EGSIEI 61
            I +T PDGS + F    +   VA +I   LAK  +A  I+G  + D SD +  +  + I
Sbjct: 1   MITITLPDGSRREFEGPVSVMQVAHAIGPGLAKATIAGQIDGGHLVDASDLIEHDAMLRI 60

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           ITPED  +L +IRHSCAH++  AV+ ++PE ++ IGP+I DGFYYD   ++PF+ ++LA 
Sbjct: 61  ITPEDQEALDIIRHSCAHLVGHAVKQLYPEAKMVIGPVIADGFYYDIYSKRPFTPEDLAA 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESI-PAKENVTLYRQGEWF 180
           IE++M E+IA+D   +K   +      LF+ + E YK+ ++E + P    + +Y   E+ 
Sbjct: 121 IEQRMVELIAQDYHVVKHITARHDVVRLFKERGEDYKLRLIEEMGPEVTAMGIYHHQEYV 180

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           D+CRGPHV +T  +K F KL +++GAYWRGD+    L RIYGTAW  +++L  ++  L++
Sbjct: 181 DMCRGPHVPNTRFLKAF-KLTRISGAYWRGDTKNEQLQRIYGTAWADKKQLEAHMQRLQD 239

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQV 299
           +EKRDHRK+ +  DLFH+ E+G G++FWH KGW I+QT+ +Y+RR  ++  Y E+  PQ+
Sbjct: 240 AEKRDHRKIGKVQDLFHLQEEGPGLVFWHPKGWVIWQTIENYIRRVYRNSGYGELRCPQI 299

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           LD  LWQ+SGHWD+Y+ NMF       T  + RT+A+KPMNCPGHV VFN GL SYR+LP
Sbjct: 300 LDVSLWQKSGHWDNYKENMFF------TDSEKRTYAVKPMNCPGHVQVFNQGLHSYRDLP 353

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R  EFG+ +RNEPSG+LHGL+RVRGFTQDD H+FCT+ Q+ +E    H   + +Y DFG
Sbjct: 354 IRYGEFGACHRNEPSGALHGLLRVRGFTQDDGHIFCTEAQIESEVTAFHRQALQVYADFG 413

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           FE I +K++ RP+KR+G    WD AE  ++  L   +      +    L GEGAFYGPK 
Sbjct: 414 FEDIQIKIALRPDKRLGDSLSWDKAEAALRAALSACE------VEWQELPGEGAFYGPKI 467

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           EY LKDAIGR WQ GTIQVDF +P R  A YV+  S++CHPVM+HRA+ GS+ERFIGI+I
Sbjct: 468 EYHLKDAIGRTWQLGTIQVDFMMPGRLGAEYVDERSQRCHPVMLHRAIVGSMERFIGILI 527

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E++ G  P WL+P+Q +V  IT +  EYA+ +   L +    + TD RNE I YKIREH+
Sbjct: 528 EHYAGIWPTWLAPVQVVVANITDAQYEYAERVHKALLNQGFRVNTDLRNEKIGYKIREHT 587

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           ++++P +++ GD+E    ++ +R         +S+   +  L  E +
Sbjct: 588 LQRVPYLLVVGDREKENGTVAVRTCSREDLGAMSISAFVERLQAEQV 634


>gi|288553677|ref|YP_003425612.1| threonyl-tRNA synthetase [Bacillus pseudofirmus OF4]
 gi|288544837|gb|ADC48720.1| threonyl-tRNA synthetase [Bacillus pseudofirmus OF4]
          Length = 643

 Score =  661 bits (1704), Expect = 0.0,   Method: Composition-based stats.
 Identities = 258/652 (39%), Positives = 412/652 (63%), Gaps = 20/652 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M   +K+TFPDG++K FP   T  D+A SIS  L KKA+A  +N  + DL  P+  +G I
Sbjct: 1   MADVLKITFPDGAVKEFPRGTTTEDIAASISPGLKKKALAGKLNHTLVDLRTPLTEDGEI 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            I+T +   +L ++RHS AH+MA+AV+ ++  V++ +GP+IE GFYYD D E+  ++++L
Sbjct: 61  AIVTQDSEEALEIMRHSTAHLMAQAVKRLFKGVKLGVGPVIEGGFYYDIDSEESITAEDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IEK+M++IIA +   ++  LS  +A   ++   + YK+E++E+IP  E++T+Y QGE+
Sbjct: 121 PKIEKEMKKIIAENLEVIRVELSRGEAIVRYKEVGDEYKLELIEAIPEGESLTIYEQGEF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRG HV ST ++K+F KL+ +AGAYWRGDS   ML RIYGTA+  + +L ++L  LE
Sbjct: 181 FDLCRGVHVPSTNKIKEF-KLLSLAGAYWRGDSKNKMLQRIYGTAFFKKADLEEHLRLLE 239

Query: 240 ESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           E+++RDHRKL +E+ +F +++    G+  W  KG  + + +  Y+  K +   Y+ + TP
Sbjct: 240 EAKERDHRKLGKELGIFALSQKVGQGLPLWLPKGATVRRVIERYIVDKEERLGYQHVYTP 299

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    L++ SGHWD Y+ +MF V   D+       F L+PMNCP H+ V+   ++SYR+
Sbjct: 300 ILGSSELYKTSGHWDHYKDDMFPVMERDN-----EEFVLRPMNCPHHMMVYKQDMRSYRQ 354

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AE G ++R E SG++ GL RVRG T +DAH+FC  +Q+  E L++  LI  +YKD
Sbjct: 355 LPLRIAELGMMHRYEMSGAVSGLQRVRGMTLNDAHIFCRPDQIKEEFLRVVYLIQEVYKD 414

Query: 418 FGFEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           FG +    +LS R      K    DA+W+ A++++K  +D +       ++     GE A
Sbjct: 415 FGLDDYKFRLSYRDPEDKEKYFDDDAMWEKAQSMLKEAMDEL------DVDYYEAEGEAA 468

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  ++ A+G+D    T+Q+DF LP RF+  YV    ++  PV++HR V  ++ER
Sbjct: 469 FYGPKLDVQVRTALGKDETLSTVQLDFLLPERFDLTYVGEDGQQHRPVVVHRGVVSTMER 528

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETIN 592
           F+  ++E +KG  P WL+P+Q  V  ++    ++YA+++ + L+     +E D RNE I 
Sbjct: 529 FVAFLLEEYKGAFPTWLAPVQVQVIPVSPDVHLDYAKKVQDALQQAGARVEIDERNEKIG 588

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           YKIRE  ++KIP +++ GDKE    ++ IR++G   ++   L   I  L +E
Sbjct: 589 YKIREAQMQKIPYMLVLGDKEMESGAVNIRKYGEQASESKELQAFISDLAEE 640


>gi|163940157|ref|YP_001645041.1| threonyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|163862354|gb|ABY43413.1| threonyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
          Length = 639

 Score =  661 bits (1704), Expect = 0.0,   Method: Composition-based stats.
 Identities = 277/644 (43%), Positives = 430/644 (66%), Gaps = 17/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEII 62
            I++ FPDGS+K F    T  ++A +IS SL KKA+A  +N +  DL   + E   +EII
Sbjct: 5   MIEIKFPDGSVKEFVKGITLEEIAGAISSSLKKKAIAGKVNDQSFDLRRNIEESAKVEII 64

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
             +    + + RHS AHI+A+AV+ I+ +V + +GP+IE+GFYYD D     + ++L +I
Sbjct: 65  IMDSDEGIRIARHSAAHILAQAVKRIYGDVNLGVGPVIENGFYYDMDLPSSVNVEDLPKI 124

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M+ II  +    +  +S E+A+ELF+   ++ K+E+LE+IP  E+VTLY+QGE+ DL
Sbjct: 125 EKEMKNIINENVKIERVEVSREEAKELFQEMNDSLKLELLEAIPNGESVTLYKQGEFVDL 184

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ STG +K F     V+GAYWRGDSN  +L RIYG A+++QQ+L +YL+F+EE+ 
Sbjct: 185 CRGPHLPSTGYLKAFQLTH-VSGAYWRGDSNNQVLQRIYGVAFSSQQKLEEYLHFVEEAA 243

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KR+HR+L  E++LF  +E+  G+ F+  KG  I   L +++R  + + +Y+E+ TP +++
Sbjct: 244 KRNHRELGSELELFMFSEEAPGMPFYLPKGQIIRNELEAFLREIQNEYNYQEVRTPFMMN 303

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           Q LW++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R
Sbjct: 304 QELWEKSGHWGHYKDNMYFSEV------DHKSFALKPMNCPGHMLMFKNKLHSYRELPIR 357

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           + EFG V+R+E SG+L+GL+RVR F QDDAH+F T EQ+ +E   +   I  +YK FGFE
Sbjct: 358 MCEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPEQIEDEIQSVLAQIDYVYKTFGFE 417

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPE  +G D LW+ AE  ++ VL ++           +  G+GAFYGPK ++
Sbjct: 418 Y-EVELSTRPEDSMGDDKLWEQAELALENVLQSLNY------KYRLNEGDGAFYGPKIDF 470

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+ R  QCGT+Q+DF +P +F+  Y++ ++EK  PV+IHRAV GS++RF+ I+IE+
Sbjct: 471 HIKDALNRSHQCGTVQLDFQMPEKFDLNYIDENNEKRRPVVIHRAVLGSLDRFLAILIEH 530

Query: 542 FKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           F G  P W++P+Q  V  ++++   +YA  IA+ L    + +E D R+E + YKIRE  +
Sbjct: 531 FGGAFPAWVAPVQVKVIPVSNAVHEQYANRIADKLAQAGIRVERDIRDEKLGYKIREAQM 590

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +K+P +++ GDKE    ++ +R++G   ++ V L   +  + +E
Sbjct: 591 QKVPYVLVIGDKEMESEAVNVRKYGEEKSEVVELNAFVESMKEE 634


>gi|266620391|ref|ZP_06113326.1| threonine--tRNA ligase [Clostridium hathewayi DSM 13479]
 gi|288868018|gb|EFD00317.1| threonine--tRNA ligase [Clostridium hathewayi DSM 13479]
          Length = 633

 Score =  661 bits (1704), Expect = 0.0,   Method: Composition-based stats.
 Identities = 281/642 (43%), Positives = 408/642 (63%), Gaps = 16/642 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K+T  +  +K F    +  ++A S+S  LAKKA A  I+G   DL   V  + ++ I+T
Sbjct: 1   MKVTLKNEEVKEFDSPLSVYEIAASLSAGLAKKACAAEIDGTPADLRTVVASDCALTILT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D    A   H+ +HI+A+AV+ ++PE ++AIGP I DGFYYDFD+ +PFS ++L  +E
Sbjct: 61  FDDEGGRAAFHHTTSHILAQAVKRLFPETKLAIGPSITDGFYYDFDRPEPFSPEDLEALE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M++I+  D       L  ++A  L + K E YKVE++E +P +E ++ YRQGE+ DLC
Sbjct: 121 TEMKKIVKEDLKLEYFTLPRKEAIALMQEKDEPYKVELIEDLPEEEIISFYRQGEYTDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+ +TG VK F KL  +AGAYWRGD +  ML+RIYGT++    +L  YL  +EE++K
Sbjct: 181 AGPHLMTTGPVKAF-KLTSIAGAYWRGDEHNKMLTRIYGTSFPKASDLEAYLTRIEEAKK 239

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           RDHRKL +E+ LF I ++G G  F+  KG  +   L ++ R    ++ Y EI TP +L++
Sbjct: 240 RDHRKLGKELGLFTIMDEGPGFPFFLPKGMVLKNALTNFWREIHEREGYVEIATPIMLNR 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHWD Y+ NM+       T  D   FA+KPMNCPG + V+    +SYR+LP+R+
Sbjct: 300 SLWETSGHWDHYKENMYT------TTIDDTEFAIKPMNCPGSMLVYKSQPRSYRDLPLRM 353

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            E G V+R+E SG+LHGLMRVR FTQDDAH++ T EQ+ +E   +  LI  +Y  FGF+ 
Sbjct: 354 GELGLVHRHEKSGALHGLMRVRCFTQDDAHIYMTPEQITDEIKGVVRLIDEVYNMFGFKY 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +GSD  W+ A N ++  LD +        +  +  G+GAFYGPK ++ 
Sbjct: 414 H-VELSTRPEDSMGSDEDWEMATNSLREALDEMGY------DYIINEGDGAFYGPKIDFH 466

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+D++GR WQCGTIQ+DF LP RF A Y  +  EK  P+MIHR + GSIERFIGI+IE++
Sbjct: 467 LEDSLGRTWQCGTIQLDFQLPLRFEAEYTGADGEKHRPIMIHRVLLGSIERFIGILIEHY 526

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P+Q  V  I+     YA+++ N LK +H+  E D R E I YKIRE  ++K
Sbjct: 527 AGKFPAWLAPVQVKVLPISDKNAAYAKDVYNTLKKNHIRCEIDERPEKIGYKIREAQLEK 586

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P +++ G KE    ++ +R   S     +S+ D   +L KE
Sbjct: 587 VPYMLVAGAKEEENHTVAVRYRDSGENVTMSVEDFAEMLKKE 628


>gi|331085681|ref|ZP_08334764.1| threonyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA]
 gi|330406604|gb|EGG86109.1| threonyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA]
          Length = 643

 Score =  660 bits (1703), Expect = 0.0,   Method: Composition-based stats.
 Identities = 281/642 (43%), Positives = 406/642 (63%), Gaps = 16/642 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K+T  DGS+K +    +  ++A  IS  LA+ A A  +NG+V DL   + ++  + I T
Sbjct: 1   MKITLKDGSVKEYSEAKSVYEIAADISEGLARMATAGEVNGEVIDLRTKIDQDCELTIHT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +        RH+ +HI+A+AV+ ++P+ ++AIGP I+DGFYYDFD+E PF++++L  IE
Sbjct: 61  FQSQEGAHAFRHTTSHILAQAVKRLFPDTKLAIGPAIDDGFYYDFDREVPFTTEDLETIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M++I+  D    +  L  E+A  L + K+E YKVE++E +P    ++ Y+QGE+ DLC
Sbjct: 121 KEMKKIVKEDLKIEQFTLPREEAIALMKEKEEPYKVELIEDLPEDAVISFYKQGEFTDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+ ST  VK F KL  +AGAYWRG     ML+RIYGT++  + +L +YL  +EE++K
Sbjct: 181 AGPHLLSTKSVKAF-KLTSLAGAYWRGSEKNKMLTRIYGTSFTKKADLDEYLAKIEEAKK 239

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           RDHRKL +E+ LF I E+G G   +  KG  +  TLI Y R    +  Y EI+TP +L++
Sbjct: 240 RDHRKLGKELGLFTILEEGPGFPIFLPKGMILKNTLIDYWREVHTRAGYVEISTPIMLNK 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW  Y+ NM+       T+ D   FA+KPMNCPG + V+     SYR+LP+R+
Sbjct: 300 QLWETSGHWAHYKENMYT------TVIDEEDFAIKPMNCPGGILVYKTEPHSYRDLPLRM 353

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            E G+V+R+E SG+LHGLMRVR FTQDDAH+F T+EQ+ +E   +  LI  +Y  FGF+ 
Sbjct: 354 GELGTVHRHEKSGALHGLMRVRSFTQDDAHIFMTREQIKDEIKGVARLIDEVYSLFGFKY 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LST+PE  +GS   WD A + ++  LD ++      +   +  G+GAFYGPK ++ 
Sbjct: 414 H-VELSTKPEDSMGSQEDWDIATDALRSALDELQ------LPYVINEGDGAFYGPKIDFH 466

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+D +GR WQCGTIQ+DF LP RF   Y+ +  EK  P+M+HR VFGSIERFIGI+IE+F
Sbjct: 467 LEDTLGRTWQCGTIQLDFQLPLRFEMEYIAADGEKHRPIMVHRVVFGSIERFIGILIEHF 526

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P Q  V  I+    EYA E+A  LK   +    D R+E I YKIR+  + K
Sbjct: 527 AGAFPTWLAPEQVKVLPISEKYHEYANEVAAKLKEAKIRCSVDERSEKIGYKIRDARLNK 586

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IP +++ G KE  E  + +R        + SL   I  +T+E
Sbjct: 587 IPYMLVVGAKEQEEGVVSVRSRFLGDEGQRSLDTFIAEITEE 628


>gi|332678497|gb|AEE87626.1| Threonyl-tRNA synthetase [Francisella cf. novicida Fx1]
          Length = 634

 Score =  660 bits (1703), Expect = 0.0,   Method: Composition-based stats.
 Identities = 301/643 (46%), Positives = 425/643 (66%), Gaps = 16/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            I + FPDGSI+ F       DVA+SIS SLAK  VA  I+ ++ D  D +     + +I
Sbjct: 1   MINIRFPDGSIREFEAGVNSLDVAKSISPSLAKATVAAYIDDQLKDAKDAINSNCELRLI 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +DP  L  +RHSCAH++A AV+ ++P  +V IGP++++GFYYDF  ++     +L  I
Sbjct: 61  TVKDPEGLETLRHSCAHLLAHAVKELYPNTEVTIGPVVDNGFYYDFSFKESIGEADLPTI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EKKM+E+  + +P   + +   +A E F+++ E YKVEI++SI A E V +Y Q  + DL
Sbjct: 121 EKKMKELAKKSAPVSYRVVPKAEAIEFFKAQGENYKVEIIDSI-ADEQVKIYTQDNFSDL 179

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ +T  +K F KL K+AGAYWRG+S+  ML+RIYGT W T+++L QYL  LEE+E
Sbjct: 180 CRGPHIPNTSVLKAF-KLTKLAGAYWRGNSDNEMLTRIYGTCWATKEDLEQYLNMLEEAE 238

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KRDHRK+ + +DLFH  ED  G+ FWH  G +I++ +  YMR    K    EI TP + D
Sbjct: 239 KRDHRKIGKVLDLFHFQEDSPGIAFWHDNGVRIWRQVEDYMRASNNKYGCSEIRTPLIAD 298

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             LWQ+SGH   Y  NMFA K       + R FA++PMNCP  V V+N  L SYR+LP+R
Sbjct: 299 FSLWQKSGHASKYAENMFATK------SENRDFAIRPMNCPTCVQVYNTKLHSYRDLPIR 352

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AEFG V+RNEPSGSLHGL+RVR FTQDD H+FCT EQ+  E + +      +YKDFGF 
Sbjct: 353 MAEFGIVHRNEPSGSLHGLLRVRSFTQDDGHIFCTPEQVEEEVILMVQQCFEVYKDFGFN 412

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              VK++ RPE R+G D  WD +E ++K  LD       + ++  +L GEGAFYGPK E+
Sbjct: 413 DFAVKIALRPENRIGDDETWDKSEQMLKNALDA------NNVSYELLPGEGAFYGPKIEF 466

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            LKDAIGR WQCGTIQ+DF++P R  A Y++ + EK  PVM+HRA+ GS+ERFIG++IE+
Sbjct: 467 HLKDAIGRSWQCGTIQLDFSMPQRLGATYIDKNGEKQVPVMLHRAIVGSLERFIGMLIEH 526

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + GNLPLWL+P+Q  V  I+++  +Y +E+  +L+ + +  + D RNE I +KIREH++ 
Sbjct: 527 YAGNLPLWLAPVQVAVMGISNNQDDYCKEVFTMLEKNGIRAKLDLRNEKIGFKIREHTLL 586

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           ++P ++I G  E  ++ I IR+       ++S+ D    L K+
Sbjct: 587 RVPYLVILGKNEQEQKIITIRKHSGEDLGQMSVDDFCAFLDKQ 629


>gi|322419731|ref|YP_004198954.1| threonyl-tRNA synthetase [Geobacter sp. M18]
 gi|320126118|gb|ADW13678.1| threonyl-tRNA synthetase [Geobacter sp. M18]
          Length = 636

 Score =  660 bits (1703), Expect = 0.0,   Method: Composition-based stats.
 Identities = 280/645 (43%), Positives = 411/645 (63%), Gaps = 18/645 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEI 61
           ++IK+T PDGS +  P  A+  D+A SI   LAK A+A  I+G + DL+ P+ +G+ +EI
Sbjct: 2   NEIKVTLPDGSQRPLPAGASIFDLAASIGAGLAKAAIAGKIDGNLVDLNTPLFDGARVEI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +T + P +L +IRHS +H+MA+AV++++P+ +V IGP IE GFYYDFD + PF+ ++L +
Sbjct: 62  VTEKSPEALEIIRHSTSHLMAQAVKALFPQAKVTIGPAIETGFYYDFDVDHPFTPEDLEK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE+KM+E+   D    +  LS   A ELF    E YKVE+++ + A   V+LY QG++ D
Sbjct: 122 IEEKMRELAKADLKIERSELSSADAIELFRKMGEDYKVELIQDLGAD-KVSLYTQGDFSD 180

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+  T   K F KL  +AGAYWRGD  R ML R+YGTA+  ++EL  YL  +EE+
Sbjct: 181 LCRGPHLPKTSGCKAF-KLTSIAGAYWRGDEKRAMLQRVYGTAFADKKELDAYLARIEEA 239

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQV 299
           +KRDHRKL +E+DLF   ++   G++ WH KG  +   L  + R   +K  Y+ +  PQ+
Sbjct: 240 KKRDHRKLGKELDLFSFNDEVGAGLVIWHPKGAMLRTILEDFERKEHLKRGYDIVVGPQI 299

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           L   LWQ+SGH+++YR NM+       T  D + + +KPMNC  H+ ++   L+SYR+LP
Sbjct: 300 LKTELWQRSGHYENYRENMYF------TTVDEQGYGVKPMNCLAHMMIYRSQLRSYRDLP 353

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R  E G+V+R+E +G LHGL+RVRGFTQDDAH+ CT EQ+  E   +   +  +   FG
Sbjct: 354 LRYFELGTVHRHERAGVLHGLLRVRGFTQDDAHILCTPEQLDAEIKGVIQFVTEVMGIFG 413

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           FE  M +LSTRPEK +GSD  W+ A + +   L              +  G+GAFYGPK 
Sbjct: 414 FEFEM-ELSTRPEKSIGSDDAWELATSALLNALKDSGRP------FEINEGDGAFYGPKI 466

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +  L+DA+ R WQC TIQ DF LP RF+  YV++  EK  PVM+HR + G+IERFIG++I
Sbjct: 467 DIKLRDALDRRWQCATIQCDFTLPERFDLTYVDADGEKKRPVMVHRVILGAIERFIGVLI 526

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E+F GN P WL+P+QA + T+T + + YAQ   + L++  + ++ DFRNE + +KIRE  
Sbjct: 527 EHFAGNFPTWLAPVQATIVTVTDNQIPYAQAAFDTLRAAGVRVQKDFRNEKLGFKIREAQ 586

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           ++KIP +++ GDKE     +  R         ++    +  + KE
Sbjct: 587 LQKIPYMLVVGDKEVEGGLLAPRYRDGKNLDAMTPEQFVAFIEKE 631


>gi|118497781|ref|YP_898831.1| threonyl-tRNA synthetase [Francisella tularensis subsp. novicida
           U112]
 gi|194323753|ref|ZP_03057529.1| threonyl-tRNA synthetase [Francisella tularensis subsp. novicida
           FTE]
 gi|208779844|ref|ZP_03247188.1| threonyl-tRNA synthetase [Francisella novicida FTG]
 gi|166223342|sp|A0Q762|SYT_FRATN RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|118423687|gb|ABK90077.1| threonyl-tRNA synthetase [Francisella novicida U112]
 gi|194322117|gb|EDX19599.1| threonyl-tRNA synthetase [Francisella tularensis subsp. novicida
           FTE]
 gi|208744299|gb|EDZ90599.1| threonyl-tRNA synthetase [Francisella novicida FTG]
          Length = 634

 Score =  660 bits (1703), Expect = 0.0,   Method: Composition-based stats.
 Identities = 301/643 (46%), Positives = 426/643 (66%), Gaps = 16/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            I + FPDGSI+ F       DVA+SIS SLAK  VA  I+ ++ D  D +     + +I
Sbjct: 1   MINIRFPDGSIREFEAGVNSLDVAKSISPSLAKATVAAYIDDQLKDAKDAINSNCELRLI 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +DP  L ++RHSCAH++A AV+ ++P  +V IGP++++GFYYDF  ++     +L  I
Sbjct: 61  TVKDPEGLEILRHSCAHLLAHAVKELYPSTEVTIGPVVDNGFYYDFSFKESIGEADLPTI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EKKM+E+  + +P   + +   +A E F+++ E YKVEI++SI A E V +Y Q  + DL
Sbjct: 121 EKKMKELAKKSAPVSYRVVPKAEAIEFFKAQGENYKVEIIDSI-ADEQVKIYTQDNFSDL 179

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ +T  +K F KL K+AGAYWRG+S+  ML+RIYGT W T+++L QYL  LEE+E
Sbjct: 180 CRGPHIPNTSVLKAF-KLTKLAGAYWRGNSDNEMLTRIYGTCWATKEDLEQYLNMLEEAE 238

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KRDHRK+ + +DLFH  ED  G+ FWH  G +I++ +  YMR    K    EI TP + D
Sbjct: 239 KRDHRKIGKVLDLFHFQEDSPGIAFWHDNGVRIWRQVEDYMRASNNKYGCSEIRTPLIAD 298

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             LWQ+SGH   Y  NMFA K       + R FA++PMNCP  V V+N  L SYR+LP+R
Sbjct: 299 FSLWQKSGHASKYAENMFATK------SENRDFAIRPMNCPTCVQVYNTKLHSYRDLPIR 352

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AEFG V+RNEPSGSLHGL+RVR FTQDD H+FCT EQ+  E + +      +YKDFGF 
Sbjct: 353 MAEFGIVHRNEPSGSLHGLLRVRSFTQDDGHIFCTPEQVEEEVILMVQQCFEVYKDFGFN 412

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              VK++ RPE R+G D  WD +E ++K  LD       + ++  +L GEGAFYGPK E+
Sbjct: 413 DFAVKIALRPENRIGDDETWDKSEQMLKNALDA------NNVSYELLPGEGAFYGPKIEF 466

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            LKDAIGR WQCGTIQ+DF++P R  A Y++ + EK  PVM+HRA+ GS+ERFIG++IE+
Sbjct: 467 HLKDAIGRSWQCGTIQLDFSMPQRLGATYIDKNGEKQVPVMLHRAIVGSLERFIGMLIEH 526

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + GNLPLWL+P+Q  V  I+++  +Y +E+  +L+ + +  + D RNE I +KIREH++ 
Sbjct: 527 YAGNLPLWLAPVQVAVMGISNNQDDYCKEVFTMLEKNGIRAKLDLRNEKIGFKIREHTLL 586

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           ++P ++I G  E  ++ I IR+       ++S+ D    L K+
Sbjct: 587 RVPYLVILGKNEQEQKIITIRKHSGEDLGQMSVDDFCAFLDKQ 629


>gi|315612715|ref|ZP_07887626.1| threonine--tRNA ligase [Streptococcus sanguinis ATCC 49296]
 gi|315314825|gb|EFU62866.1| threonine--tRNA ligase [Streptococcus sanguinis ATCC 49296]
          Length = 647

 Score =  660 bits (1703), Expect = 0.0,   Method: Composition-based stats.
 Identities = 265/651 (40%), Positives = 409/651 (62%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  +  +GSIEI+
Sbjct: 1   MIKITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRSITEDGSIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQ 121
           TP+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D      S+++L +
Sbjct: 61  TPDHEDALDILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNTAGQISNEDLPR 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWF 180
           IE++MQ+I+  + P +++ ++ ++ARE+F+   + YK+E++E     E  +T+YRQGE+ 
Sbjct: 121 IEEEMQKIVKENFPSIREEVTKDEAREIFK--NDPYKLELIEEHSEDEGGLTIYRQGEYV 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ RIYGTAW  +++L  YL   EE
Sbjct: 179 DLCRGPHVPSTGRIQIFHLLH-VAGAYWRGNSDNAMMQRIYGTAWFDKKDLKNYLQMREE 237

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           +++RDHRKL +E+DLF I+++   G+ FW   G  I + L  Y+  +++   Y+ + TP 
Sbjct: 238 AKERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVDKELASGYQHVYTPP 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L++ SGHWD Y+ +MF          D   F L+PMNCP H+ VF H + SYREL
Sbjct: 298 LASVELYKTSGHWDHYQEDMFPTMDMG----DGEEFVLRPMNCPHHIQVFKHHVHSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y+DF
Sbjct: 354 PIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYEDF 413

Query: 419 GFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
              +   +LS R      K   +D +W++A+ +++  LD +       ++     GE AF
Sbjct: 414 NLTEYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAF 467

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K A+G++    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF
Sbjct: 468 YGPKLDIQVKTALGKEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMIHRGVISTMERF 527

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
             I+IEN+KG  P WL+P Q  +  ++    V+YA E+A  L+   +  + D RNE + +
Sbjct: 528 TAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAKKLRDCGVRADVDERNEKMQF 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR     KIP  +I GDKE  + ++ +RR+G   TQ VS+ D +  +  +
Sbjct: 588 KIRASQTSKIPYQLIVGDKEMEDGTVNVRRYGQKETQTVSVDDFVQAILAD 638


>gi|165932872|ref|YP_001649661.1| threonyl-tRNA synthetase [Rickettsia rickettsii str. Iowa]
 gi|165907959|gb|ABY72255.1| threonyl-tRNA synthetase [Rickettsia rickettsii str. Iowa]
          Length = 644

 Score =  660 bits (1702), Expect = 0.0,   Method: Composition-based stats.
 Identities = 327/644 (50%), Positives = 441/644 (68%), Gaps = 15/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I ++FPDGSIK F  + T  +VA +IS SLAK A+   ING++ DLS  +  +    I+
Sbjct: 10  MINISFPDGSIKQFAKNITAYEVANAISMSLAKAAMVAEINGELQDLSIVIDNDCKFRIL 69

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +DP  L +IRH  AH+ AEAV+ ++PE QV IGP IE+G+YYDF +++PF++D+LA I
Sbjct: 70  TAKDPECLEIIRHDAAHLTAEAVKELFPETQVTIGPAIENGYYYDFARDKPFTNDDLAVI 129

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E KMQE+  ++    ++    +KA E F+S  E YK EI+ SIPA E +TLYRQG + DL
Sbjct: 130 EAKMQELSQKNEQVTRELWDRDKAVEFFKSIGEHYKAEIIASIPAGEPITLYRQGNFIDL 189

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH  STG VK F KLMKVAGAYWRGDS   ML RIYGTAW T+++L  YL  LEE+E
Sbjct: 190 CRGPHSPSTGVVKHF-KLMKVAGAYWRGDSRNEMLQRIYGTAWATKEQLDSYLLMLEEAE 248

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD 301
           KRDHRKL RE+DLFH  E+  G++FWH KGW I+ T+  Y+R+KI+ + Y E+ TP ++D
Sbjct: 249 KRDHRKLGRELDLFHFQEEAQGMVFWHDKGWSIYNTIEQYIRKKIRKNGYTEVKTPVLVD 308

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW+ +R +MFA++  D T       ALKPMNCP HV +F  G+KSYR+LP+R
Sbjct: 309 KSLWEASGHWEKFRDDMFALETDDKT------LALKPMNCPCHVQIFKQGIKSYRDLPLR 362

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           ++EFG  +RNE SG+LHGLMRVR   QDDAH+FC  EQ+ +E +    L+  +YKDFGF 
Sbjct: 363 MSEFGLCHRNEASGALHGLMRVRSLVQDDAHIFCAAEQITDETVSFCKLLTEVYKDFGFT 422

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            I VK S RPE R GS+ +WD AEN +K  ++      Q      +  GEGAFYGPK E+
Sbjct: 423 DIKVKFSDRPEIRAGSNEVWDKAENALKEAVE------QAGFTYTLNPGEGAFYGPKLEF 476

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
           +L DAIGR WQCGT+Q+DF LP R +A YV +  EK  PVM+HRA+ GS+ERFIGI+IE 
Sbjct: 477 VLTDAIGRQWQCGTLQMDFVLPERLDASYVAASGEKKRPVMLHRAILGSLERFIGILIEE 536

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  PLWL+P+Q  + TITS   +YA E+   L  + +  + +   + INYKIRE S +
Sbjct: 537 YAGRFPLWLAPVQVAIATITSDLNDYALEVQKALIDNGVRTDFNISPDKINYKIREFSNQ 596

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           KIP+I + G +E   + + IRR G+T  + +S+   I ++ +E+
Sbjct: 597 KIPMIAVIGKQEQENKQVAIRRLGTTDQEVLSVEQLIAVVKEEN 640


>gi|329733112|gb|EGG69449.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus 21193]
          Length = 644

 Score =  660 bits (1702), Expect = 0.0,   Method: Composition-based stats.
 Identities = 268/650 (41%), Positives = 403/650 (62%), Gaps = 21/650 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
             I + FPDG+ K F    T  D+A+SIS  L KKAVA   NG++ DL+ P+  +GSIEI
Sbjct: 2   EQINIQFPDGNKKAFDKGTTTEDIAQSISPGLRKKAVAGKFNGQLVDLTKPLETDGSIEI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +TP    +L V+RHS AH+MA A++ ++  V+  +GP+IE GFYYDFD +Q  SSD+  Q
Sbjct: 62  VTPGSEEALEVLRHSTAHLMAHAIKRLYGNVKFGVGPVIEGGFYYDFDIDQNISSDDFEQ 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK M++I+  +    ++ +S ++A+EL     + YK+E++++IP  ENVTLY QG++ D
Sbjct: 122 IEKTMKQIVNENMKIERKVVSRDEAKEL--FSNDEYKLELIDAIPEDENVTLYSQGDFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG HV ST ++K+F KL+  AGAYWRGDSN  ML RIYGTA+  ++EL  +L  LEE 
Sbjct: 180 LCRGVHVPSTAKIKEF-KLLSTAGAYWRGDSNNKMLQRIYGTAFFDKKELKAHLQMLEER 238

Query: 242 EKRDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRK+ +E++LF +    G+G+  W   G  I + +  Y+  +++   Y+ + TP +
Sbjct: 239 KERDHRKIGKELELFTNSQLVGAGLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVL 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +  L++ SGHWD Y+ +MF     D+T     +  L+PMNCP H+ ++ +   SYRELP
Sbjct: 299 ANVDLYKTSGHWDHYQEDMFPPMQLDET----ESMVLRPMNCPHHMMIYANKPHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G+++R E SG++ GL RVRG T +D+H+F   +Q+  E  ++ N+II +YKDFG
Sbjct: 355 IRIAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVNMIIDVYKDFG 414

Query: 420 FEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           FE    +LS R      K    D +W+ AEN++K   D +  S ++ I      GE AFY
Sbjct: 415 FEDYSFRLSYRDPEDKEKYFDDDDMWNKAENMLKEAADELGLSYEEAI------GEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G++    T Q+DF LP RF+  Y+    E   PV+IHR V  ++ERF+
Sbjct: 469 GPKLDVQVKTAMGKEETLSTAQLDFLLPERFDLTYIGQDGEHHRPVVIHRGVVSTMERFV 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             + E  KG  P WL+P Q  +  +      +YA+++ + LKS  + +  D RNE + YK
Sbjct: 529 AFLTEETKGAFPTWLAPKQVQIIPVNVDLHYDYARQLQDELKSQGVRVSIDDRNEKMGYK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IRE  ++KIP  I+ GDKE     + +R++GS   + V   + I  L  E
Sbjct: 589 IREAQMQKIPYQIVVGDKEVENNQVNVRQYGSQDQETVEKDEFIWNLVDE 638


>gi|310658431|ref|YP_003936152.1| threonyl-tRNA synthetase [Clostridium sticklandii DSM 519]
 gi|308825209|emb|CBH21247.1| threonyl-tRNA synthetase [Clostridium sticklandii]
          Length = 637

 Score =  660 bits (1702), Expect = 0.0,   Method: Composition-based stats.
 Identities = 270/645 (41%), Positives = 404/645 (62%), Gaps = 16/645 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEII 62
            IK+   DGS+K F       DVA SIS  LA+  V   ING+V DL  P+ + + +E +
Sbjct: 1   MIKIELKDGSLKEFESGIRAIDVANSISEGLARAIVGAKINGEVKDLKTPINDDAKLEFV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
             ED     V  H+  H+MA+A++ ++PE ++AIGP IE+GFYYD D E   S ++L +I
Sbjct: 61  KFEDKDGKEVFWHTSTHVMAQAIKRLYPEAKLAIGPAIENGFYYDIDLEHRLSPEDLEKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M++I+  +    +  L  ++A +  +   E YKVE++E +     ++ Y+QGE+ DL
Sbjct: 121 EAEMKKIVKEEFEVERYELPKDEAIDFMKKLGEDYKVELIEGLEEGSTISFYKQGEFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPH+ +  +VK F KL+ VAGAYWR D +  ML R+YG A+  +++L  Y+  +EE++
Sbjct: 181 CAGPHLPNVKKVKAF-KLLSVAGAYWRADQSNKMLQRVYGIAFEKKKDLDDYIQMMEEAK 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
            RDHRKL +E++LF + ++G G  F+  KG  +   L+ Y R    +D Y EI TP +L+
Sbjct: 240 LRDHRKLGKELELFTLLDEGPGFPFFLPKGTVLKNKLLEYWREVHREDGYVEIETPIILN 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW +Y+ NM+ V+       D   FA+KPMNCPG + V+   ++SY++ P+R
Sbjct: 300 RQLWETSGHWFNYKENMYTVEI------DEEDFAIKPMNCPGGMLVYQTKMRSYKDFPIR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           + E G V+R+E SG+LHGLMRVR FTQDDAH+F   EQ+ +E   + +LI  IYK FGF 
Sbjct: 354 MGEIGRVHRHELSGALHGLMRVRAFTQDDAHIFMLPEQIKDEIKGVVSLIDKIYKTFGFS 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
             + +LSTRPEK +G  ++WD+AE+ +K  L+ +       +   +  G+GAFYGPK ++
Sbjct: 414 YHL-ELSTRPEKFLGEISMWDEAESNLKAALEELG------LPYIINEGDGAFYGPKIDF 466

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L+D IGR WQCGTIQ+D+ LP RF   Y+    EK  PVMIHR  FGSIERFIGI+IE+
Sbjct: 467 HLRDCIGRTWQCGTIQLDYQLPERFELSYIGKDGEKHRPVMIHRVAFGSIERFIGILIEH 526

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  PLW++P+Q  +  I+   ++YA++I   +    + +E D R E I YKIRE  ++
Sbjct: 527 YAGKFPLWIAPVQVKILPISDKFMDYAKQIEKAMYDAKIRVELDDRAEKIGYKIREAQLE 586

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           K+P +II G+KE +E +I +R          +  D +  L +E +
Sbjct: 587 KVPYMIIVGEKELNEGNISVRSRDLGDLGFKNTDDFLKELNEEII 631


>gi|306829065|ref|ZP_07462255.1| threonine--tRNA ligase [Streptococcus mitis ATCC 6249]
 gi|304428151|gb|EFM31241.1| threonine--tRNA ligase [Streptococcus mitis ATCC 6249]
          Length = 647

 Score =  660 bits (1702), Expect = 0.0,   Method: Composition-based stats.
 Identities = 264/651 (40%), Positives = 409/651 (62%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  +  +GSIEI+
Sbjct: 1   MIKITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGSIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQ 121
           TP+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D      S+++L +
Sbjct: 61  TPDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNTAGQISNEDLPR 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWF 180
           IE++M++I+  + P +++ ++ ++ARE+F+   + YK+E++E     E  +T+YRQGE+ 
Sbjct: 121 IEEEMKKIVKENFPSIREEVTKDEAREIFK--NDPYKLELIEEHSEDEGGLTIYRQGEYV 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ RIYGTAW  +++L  YL   EE
Sbjct: 179 DLCRGPHVPSTGRIQIFHLLH-VAGAYWRGNSDNAMMQRIYGTAWFDKKDLKNYLQMREE 237

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           +++RDHRKL +E+DLF I+++   G+ FW   G  I + L  Y+  +++   Y+ + TP 
Sbjct: 238 AKERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVDKELASGYQHVYTPP 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L++ SGHWD Y+ +MF          D   F L+PMNCP H+ VF H + SYREL
Sbjct: 298 LASVELYKTSGHWDHYQEDMFPTMDMG----DGEEFVLRPMNCPHHIQVFKHHVHSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y+DF
Sbjct: 354 PIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYEDF 413

Query: 419 GFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
              +   +LS R      K   +D +W++A+ +++  LD +       ++     GE AF
Sbjct: 414 NLTEYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAF 467

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K A+G++    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF
Sbjct: 468 YGPKLDIQVKTALGKEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMIHRGVISTMERF 527

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
             I+IEN+KG  P WL+P Q  +  ++    V+YA E+A  L+   +  + D RNE + +
Sbjct: 528 TAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAKKLRDCGVRADVDERNEKMQF 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR     KIP  +I GDKE  + ++ +RR+G   TQ VS+ D +  +  +
Sbjct: 588 KIRASQTSKIPYQLIVGDKEMEDGTVNVRRYGQKETQTVSVDDFVQAILAD 638


>gi|71898248|ref|ZP_00680422.1| Threonyl-tRNA synthetase, class IIa [Xylella fastidiosa Ann-1]
 gi|71731987|gb|EAO34044.1| Threonyl-tRNA synthetase, class IIa [Xylella fastidiosa Ann-1]
          Length = 635

 Score =  660 bits (1702), Expect = 0.0,   Method: Composition-based stats.
 Identities = 292/647 (45%), Positives = 423/647 (65%), Gaps = 17/647 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAING-KVCDLSDPVREGSI-EI 61
            I +T PDGS + F    +   V+ +I   LAK  +A  I+G  + D SD +   +I  I
Sbjct: 1   MITITLPDGSRREFEGPVSVMQVSHAIGPGLAKATIAGQIDGGHLVDASDLIEHDAILRI 60

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           ITPED  +L +IRHSCAH++  AV+ ++PE ++ IGP+I DGFYYD   ++PF+ ++LA 
Sbjct: 61  ITPEDQEALEIIRHSCAHLVGHAVKQLYPEAKMVIGPVIADGFYYDIYSKRPFTPEDLAA 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESI-PAKENVTLYRQGEWF 180
           IE++M E+IA+D   +K   +      LF+ + E YK+ ++E + P    + +Y   E+ 
Sbjct: 121 IEQRMVELIAQDYDVVKHITARHDVVRLFKERGEDYKLRLIEDMGPEVTAMGIYHHQEYV 180

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           D+CRGPHV +T  +K F    +++GAYWRG++    L RIYGTAW  +++L  Y+  L++
Sbjct: 181 DMCRGPHVPNTRFLKAFRLT-RISGAYWRGNTKNEQLQRIYGTAWADKKQLEAYMQRLQD 239

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQV 299
           +EKRDHRK+ +  DLFH+ E+G G++FWH KGW I+QT+ +Y+RR  ++  Y E+  PQ+
Sbjct: 240 AEKRDHRKIGKAQDLFHLQEEGPGLVFWHPKGWVIWQTIENYIRRVYRNSGYGELRCPQI 299

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           LD  LWQ+SGHWD+Y+ NMF       T  + RT+A+KPMNCPGHV VFN GL SYR+LP
Sbjct: 300 LDVSLWQKSGHWDNYKENMFF------TDSEKRTYAVKPMNCPGHVQVFNQGLHSYRDLP 353

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R  EFG+ +RNEPSG+LHGL+RVRGFTQDD H+FCT+ Q+  E    H   + +Y DFG
Sbjct: 354 IRYGEFGACHRNEPSGALHGLLRVRGFTQDDGHIFCTEAQIEAEVTAFHRQALQVYADFG 413

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           FE I +K++ RP+KR+G    WD AE  ++  L   +      +    L GEGAFYGPK 
Sbjct: 414 FENIQIKIALRPDKRLGDSLSWDKAEAALRSALSACE------VEWQELPGEGAFYGPKI 467

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           EY LKDAIGR WQ GTIQVDF +P R  A YV+  S++ HPVM+HRA+ GS+ERFIGI+I
Sbjct: 468 EYHLKDAIGRTWQLGTIQVDFMMPGRLGAEYVDERSQRRHPVMLHRAIVGSMERFIGILI 527

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E++ G  P WL+P+Q ++  IT +  EYA+++   L +    +  D RNE I YKIREH+
Sbjct: 528 EHYAGIWPTWLAPVQVVIANITDAQYEYAEQVHKALLNQGFRVNIDLRNEKIGYKIREHT 587

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           ++++P +++ GD+E    ++ +R         +S+   +  L  E +
Sbjct: 588 LQRVPYLLVVGDREKENGTVAVRTCSREDLGAMSISAFVERLQTEQV 634


>gi|124023562|ref|YP_001017869.1| threonyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303]
 gi|166225478|sp|A2CAU4|SYT_PROM3 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|123963848|gb|ABM78604.1| Threonyl-tRNA synthatase [Prochlorococcus marinus str. MIT 9303]
          Length = 640

 Score =  659 bits (1701), Expect = 0.0,   Method: Composition-based stats.
 Identities = 312/643 (48%), Positives = 430/643 (66%), Gaps = 16/643 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDG+ K F    T  +VAES+   LAK A+A  +NG + D   P+  +  + IIT +
Sbjct: 4   ITLPDGNKKKFDQPVTIMEVAESLGPGLAKAAIAGRVNGVLLDTCIPIEKDSEVNIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   +  IRHS AH++  AV+ ++PE ++AIGP+IEDGFYYD   +QPF+  +L  IE +
Sbjct: 64  DQDGIETIRHSFAHLIGHAVKQLYPEAKMAIGPVIEDGFYYDIAYDQPFTPKDLEAIEAR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+E++  D     + +S E+A + FE + E YK+EI++ IP  E + LYR  E+ D+CRG
Sbjct: 124 MKELVKLDYDVNVEIVSREEAHKEFEKRCEPYKIEIVDEIPENEIIKLYRHQEYTDMCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +T  ++ F KLMKV+GAYWRGDSN+ ML RIYGTAW + +EL  YL  LEE+EKRD
Sbjct: 184 PHVPNTRHLRTF-KLMKVSGAYWRGDSNKTMLQRIYGTAWGSSKELKAYLKRLEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHL 304
           HR++A++M LFH  E+  G+IFWH KGW I+Q L  Y+R  +    Y+EI TPQV+D+ L
Sbjct: 243 HRRIAKQMSLFHTQEEAPGMIFWHAKGWAIYQVLEQYIRETLSLHAYQEIRTPQVVDRSL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHW+ ++ +MF       T  + R +A+KPMNCP HV +FN GLKSYR+LP+RLAE
Sbjct: 303 WEKSGHWEKFKDDMFT------TTSENREYAIKPMNCPCHVQIFNQGLKSYRDLPIRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS  RNEPSGSLHGLMRVR F QDDAH+FCT+ Q+  E  K  +L+  IY+ FGF+ ++
Sbjct: 357 FGSCLRNEPSGSLHGLMRVRNFVQDDAHIFCTELQVQEEVSKFIDLVFEIYRSFGFDSVL 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +KLSTRPEKRVGSD +WD +E  +   LD         +   +L GEGAFYGPK E+ LK
Sbjct: 417 IKLSTRPEKRVGSDEIWDKSEKALSDALDA------KGLAWDLLPGEGAFYGPKIEFSLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D +GR WQCGTIQVDF++P R  A YV   S++  PVM+HRA+ GS ERFIGI+IE++ G
Sbjct: 471 DCLGRVWQCGTIQVDFSMPERLGASYVAEDSQRRTPVMLHRAILGSFERFIGILIEHYAG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
            +P+WL+P+Q  V  IT    +  Q++   L +     E D RNE I +K+REH+++++P
Sbjct: 531 RMPVWLAPVQVAVMGITDRNAQTCQDVCKKLSALEYRTEVDLRNEKIGFKVREHTLQRVP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLP 647
            +II GDKE     + +R         + L   I +L  E++ 
Sbjct: 591 FLIIIGDKEQQSGEVAVRTREGKDFGSMPLNSFISLL-DEAIA 632


>gi|157825427|ref|YP_001493147.1| threonyl-tRNA synthetase [Rickettsia akari str. Hartford]
 gi|166225491|sp|A8GML4|SYT_RICAH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|157799385|gb|ABV74639.1| threonyl-tRNA synthetase [Rickettsia akari str. Hartford]
          Length = 635

 Score =  659 bits (1701), Expect = 0.0,   Method: Composition-based stats.
 Identities = 321/644 (49%), Positives = 438/644 (68%), Gaps = 15/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            I ++FPDGS++ F    T  +VA +IS SLAK A+   ING++ DLS  +  +  + I+
Sbjct: 1   MINISFPDGSVRQFENDITAYEVANAISMSLAKAAMVAEINGELKDLSTVIENDCKLRIL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   L +IRH  AHI+AEA + ++P++QV IGP IE+GF+YDF K++PF+ D++A I
Sbjct: 61  TAKDSECLEIIRHDAAHIIAEAAKELFPDIQVTIGPAIENGFFYDFAKDKPFTPDDVAMI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M EI+ R+    ++  + +KA E F+S  E YK EI+ SIPA E +TLYRQG + DL
Sbjct: 121 EARMHEIVKRNEQITRELWNRDKAIEFFKSIGEHYKAEIIASIPAGEQITLYRQGNFIDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH  STG VK F KLMKVAGAYWRGDS   ML RIYGTAW T+++L  YL  LEE+E
Sbjct: 181 CRGPHAPSTGFVKHF-KLMKVAGAYWRGDSRNEMLQRIYGTAWATKEQLDNYLLMLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD 301
           KRDHRKL +E+DLFH  E+  G++FWH KGW I+ T+  Y+R+KI+ + Y E+ TP ++D
Sbjct: 240 KRDHRKLGKELDLFHFQEEAQGMVFWHDKGWSIYNTIEQYIRKKIRKNGYTEVKTPVLVD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW+ +R +MFA+   D T       ALKPMNCP HV +F  G+KSYR+LP+R
Sbjct: 300 KSLWEASGHWEKFRDDMFALDTDDKT------LALKPMNCPCHVQIFKQGIKSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           ++EFG  +RNE SG+LHGLMRVR   QDDAH+FCT+EQ+ +E +    L+  +YKDFGF 
Sbjct: 354 MSEFGLCHRNEASGALHGLMRVRSLVQDDAHIFCTEEQITDETVSFCKLLTEVYKDFGFT 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            I VK S RPE R GS+  WD AEN +K  ++             +  GEGAFYGPK E+
Sbjct: 414 NISVKFSDRPEVRAGSNGTWDKAENALKEAVEKAG------FTYTLNPGEGAFYGPKLEF 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
           +L DAIGR WQCGT+Q+DF LP R +A Y+ +  EK  PVM+HRA+ GS+ERFIGI+IE 
Sbjct: 468 VLTDAIGRQWQCGTLQMDFVLPERLDASYIAASGEKKRPVMLHRAILGSLERFIGILIEE 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  PLWL+PIQ  + TITS   +YA E+   L  + +  + +   + INYKIRE   +
Sbjct: 528 YAGCFPLWLAPIQVAIATITSDLNDYALEVQKALIDNGVRTDINISPDKINYKIREFYNQ 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           KIP+I + G +E   + + IRR  +T  + +SL   I ++ +E+
Sbjct: 588 KIPMIAVIGKQEQENKQVTIRRLRTTEQEVLSLEQLITLIKEEN 631


>gi|302871393|ref|YP_003840029.1| threonyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
 gi|302574252|gb|ADL42043.1| threonyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
          Length = 639

 Score =  659 bits (1701), Expect = 0.0,   Method: Composition-based stats.
 Identities = 277/644 (43%), Positives = 405/644 (62%), Gaps = 17/644 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
           + I +T PDG +       +  +  ++IS  L K+AVA  I+G + DL   + ++ S E+
Sbjct: 2   NKIAVTLPDGKVVEAEKGISALEFIKTISMKLYKEAVACRIDGVLKDLWTCLDKDCSFEV 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           +T        V  H+ +HI+A+AV+ ++ + V++ IGP I+ GFYYDFD E+  + + L 
Sbjct: 62  VTFSSDEGKKVYWHTTSHILAQAVKRLFGDKVKLGIGPAIDKGFYYDFDVEESITIEILE 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IE++MQ+II  D    +  LS E+A +L + + E YKVE++  IP  E ++ YRQGE+ 
Sbjct: 122 KIEQEMQKIIKEDLKIERFELSREEAIKLMQQRGENYKVELINDIPEGEIISFYRQGEFV 181

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLC GPH+ STG+VK F KL+ VAGAYWRGDS   ML R+YG ++  + +L +YL  LEE
Sbjct: 182 DLCTGPHLPSTGRVKAF-KLLSVAGAYWRGDSKNKMLQRVYGVSYEKKSQLDEYLTMLEE 240

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQV 299
           ++KRDHRKL RE+DLF I ++G G  F+  KG  I   L  + R +  +  Y+EI TP +
Sbjct: 241 AKKRDHRKLGRELDLFDIFDEGPGFPFFLPKGMIIRNILEDFWREEHKRRGYQEIKTPIM 300

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           L + LW QSGHWD Y+ NM+  K       D + FA+KPMNCPG + V+     SYRELP
Sbjct: 301 LTKDLWIQSGHWDHYKENMYFTKI------DDQEFAIKPMNCPGSILVYKRKSHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
            RL E G V+R+E SG LHGLMRVR FTQDDAH+F    Q+ +E   + +LI   Y  FG
Sbjct: 355 QRLCELGLVHRHELSGVLHGLMRVRCFTQDDAHIFMLPSQIKDEIKGVIDLIDYFYSVFG 414

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F+   V+LSTRPE  +G+D  W+ AE  +K  L+ +       IN  +  G+GAFYGPK 
Sbjct: 415 FKYH-VELSTRPENSMGTDEQWNMAETALKEALEEVG------INYKINEGDGAFYGPKI 467

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           ++ L+D++ R WQC TIQ+DF +P RF+ +Y+     K  PVM+HR VFGSIERFI I+ 
Sbjct: 468 DFHLEDSLKRTWQCATIQLDFQMPERFDLYYIGEDGAKHRPVMLHRVVFGSIERFIAILT 527

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E+F G  P+WL+P Q  V  ++ +  +YA +I+  LK +   +E D+R+ET+ YKIR+  
Sbjct: 528 EHFAGAFPVWLAPTQIRVIPVSDNFNDYAAKISQTLKENGFRVEEDYRSETVGYKIRDAQ 587

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           ++KIP ++I G+KE  E +I +R          ++ + + ++ +
Sbjct: 588 LQKIPYMVIVGEKEQKENTIAVRDRKKGDLGSFTIDEFVSMVKE 631


>gi|307702092|ref|ZP_07639099.1| threonyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
 gi|307707425|ref|ZP_07643907.1| threonyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
 gi|307616377|gb|EFN95568.1| threonyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
 gi|307616579|gb|EFN95769.1| threonyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
          Length = 647

 Score =  659 bits (1701), Expect = 0.0,   Method: Composition-based stats.
 Identities = 264/651 (40%), Positives = 408/651 (62%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  +  +GSIEI+
Sbjct: 1   MINITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGSIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQ 121
           TP+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D      S+++L +
Sbjct: 61  TPDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNTAGQISNEDLPR 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWF 180
           IE++MQ+I+  + P +++ ++ ++ARE+F+   + YK+E++E     E  +T+YRQGE+ 
Sbjct: 121 IEEEMQKIVKENFPSIREEVTKDEAREIFK--NDPYKLELIEEHSEDEGGLTIYRQGEYV 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ RIYGTAW  +++L  YL   EE
Sbjct: 179 DLCRGPHVPSTGRIQIFHLL-NVAGAYWRGNSDNAMMQRIYGTAWFDKKDLKSYLQMREE 237

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           +++RDHRKL +E+DLF I+++   G+ FW   G  I + L  Y+  +++   Y+ + TP 
Sbjct: 238 AKERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVDKELASGYQHVYTPP 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L++ SGHWD Y+ +MF          D   F L+PMNCP H+ VF H + SYREL
Sbjct: 298 LASVELYKTSGHWDHYQEDMFPTMDMG----DGEEFVLRPMNCPHHIQVFKHHVHSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y+DF
Sbjct: 354 PIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYEDF 413

Query: 419 GFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
              +   +LS R      K   +D +W++A+ +++  LD +       ++     GE AF
Sbjct: 414 NLTEYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAF 467

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K A+G++    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF
Sbjct: 468 YGPKLDIQVKTALGKEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMIHRGVISTMERF 527

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
             I+IEN+KG  P WL+P Q  +  ++    V+YA E+A  L+   +  + D RNE + +
Sbjct: 528 TAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAKKLRDRGVRADVDERNEKMQF 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR     KIP  +I GDKE  + ++ +RR+G   TQ VS+ D +  +  +
Sbjct: 588 KIRASQTSKIPYQLIVGDKEMEDGTVNVRRYGQKETQTVSVDDFVQAILAD 638


>gi|150389418|ref|YP_001319467.1| threonyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
 gi|149949280|gb|ABR47808.1| threonyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
          Length = 636

 Score =  659 bits (1701), Expect = 0.0,   Method: Composition-based stats.
 Identities = 275/644 (42%), Positives = 413/644 (64%), Gaps = 16/644 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
             +K+   DGS++      +  DVA+ IS+ LA+ A+   ++GK  DL  P+  +  + I
Sbjct: 2   EMVKVALKDGSVREVEKGTSILDVAKEISQGLARVAIGAELDGKKIDLFAPIEGDCQLSI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +  ED      +RH+ AH++A+AV  ++P  ++AIGP I++GFYYDFD E  F  ++L +
Sbjct: 62  LRFEDEGGEEFLRHTSAHLLAQAVLRLFPNTKLAIGPAIDNGFYYDFDTEHRFIPEDLEK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE +MQ+I+  D    +  LS +KA EL + + E YK+E+++ +P    ++ Y+QGE+ D
Sbjct: 122 IEAEMQKIVKEDLHVERFELSRDKAIELVKEQGEDYKLELIQDLPEDAVISFYKQGEFTD 181

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LC GPHV STG++K F KL+ +AGAYWRGD    ML RIYGT++  + +L  +L  LEE+
Sbjct: 182 LCAGPHVLSTGKIKAF-KLLSIAGAYWRGDEKNKMLQRIYGTSFTKKADLEAHLERLEEA 240

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVL 300
           +KRDHRK+ +E+DLF + E+G G  F+H  G  +   L ++ RR+  K  YEEI TP +L
Sbjct: 241 KKRDHRKIGKELDLFSLNEEGPGFPFFHPNGMIVRNELENFWRREHTKRGYEEIKTPIIL 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ LW+QSGHWD Y+ NM+       T  D   +A+KPMNCPG + ++   + SYR+LP+
Sbjct: 301 NEQLWKQSGHWDHYQENMYF------TNIDDANYAVKPMNCPGSILMYKRKMHSYRDLPI 354

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+ E G V+R+E SG+LHGLMRVR FTQDDAH+F   EQ+ +E L + N +   YK FGF
Sbjct: 355 RMGELGLVHRHELSGALHGLMRVRCFTQDDAHIFMLPEQIKDEILGVMNFVDYFYKVFGF 414

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           +  + +LSTRP+  +G+D  WD A N ++  L+      ++ +   +  G+GAFYGPK +
Sbjct: 415 KYHI-ELSTRPKDSMGTDEEWDLAINSLREALE------ENNVKYKLNEGDGAFYGPKID 467

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           + L+DAIGR WQCGTIQ+DF +P RF+  YV +  EK  P+MIHR +FGSIERFIGI+IE
Sbjct: 468 FHLEDAIGRTWQCGTIQLDFQMPQRFDINYVGADGEKHRPIMIHRVIFGSIERFIGILIE 527

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           ++ G  P WL+P+QA +  IT + +EYA+++   +    + +  D R+E I +KIRE  +
Sbjct: 528 HYAGKFPAWLAPVQAKILPITDNHLEYARKLQQQMLEKDIRVVIDERSEKIGFKIREARL 587

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +++P +++ GDKE    ++ +R         V     I  L KE
Sbjct: 588 ERVPYMLVIGDKEVESETVAVRAREEGELGAVDASKFIGDLVKE 631


>gi|325263795|ref|ZP_08130528.1| threonine--tRNA ligase [Clostridium sp. D5]
 gi|324030833|gb|EGB92115.1| threonine--tRNA ligase [Clostridium sp. D5]
          Length = 641

 Score =  659 bits (1701), Expect = 0.0,   Method: Composition-based stats.
 Identities = 277/642 (43%), Positives = 402/642 (62%), Gaps = 16/642 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K+T  DG++K +    +  ++A  IS  LA+ A A  ING+  DL   V R+  + I+T
Sbjct: 1   MKITLKDGTVKEYAGSRSIIEIASDISEGLARMATAGEINGETADLRTIVDRDCDLNILT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D +      H+ +HIMA+AV+ ++P+ ++AIGP + DGFYYD D+E P + ++L +IE
Sbjct: 61  FQDEKGKGAFWHTASHIMAQAVKRLYPDTRLAIGPSVSDGFYYDIDRETPLTVEDLEKIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M++I+    P  +     ++A   FE K E YKVE++E +P    ++ Y Q E+ DLC
Sbjct: 121 AEMKKIVKEALPIEQYTKPRQEAIAYFEEKGEPYKVELIEDLPDDAVISFYSQAEFTDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+ +T  VK F KL  +AGAYWRG     ML RIYGTA+  + EL +YL  LEE++K
Sbjct: 181 AGPHLMTTKPVKAF-KLTSLAGAYWRGSEKNKMLQRIYGTAFPKKAELDEYLTMLEEAKK 239

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           RDHRKL +E+ LF + ++G G  F+  KG  +  TL+ Y R    ++ Y EI TP +L +
Sbjct: 240 RDHRKLGKELGLFMMRDEGPGFPFFLPKGMVLKNTLLDYWREIHSRNGYVEIATPIMLSR 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
           HLW+ SGHWD Y+ NM+       T+ D   FA+KPMNCPG + V+    +SYR+LP+R+
Sbjct: 300 HLWETSGHWDHYKDNMYT------TVIDEEDFAIKPMNCPGGILVYQSEPRSYRDLPLRM 353

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            E G V+R+E SG LHGLMRVR FTQDDAH+F   EQ+ +E   +  LI  +Y  FGF+ 
Sbjct: 354 GELGLVHRHEKSGQLHGLMRVRCFTQDDAHIFMMPEQIRDEIKDVARLIDEVYSLFGFKY 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +GSD  W+ A   ++G LD ++      +   V  G+GAFYGPK ++ 
Sbjct: 414 H-VELSTRPEDSMGSDEDWEMATEALRGALDDLE------LPYVVNEGDGAFYGPKIDFH 466

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+D+IGR WQCGTIQ+DF LP RF+  Y  +  EK  P+MIHR  FGSIERFIGI+IE+F
Sbjct: 467 LEDSIGRTWQCGTIQLDFQLPLRFDLEYTGADGEKHRPIMIHRVAFGSIERFIGILIEHF 526

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P+Q  V  I+   ++Y +++ + L    +  + D R E I YKIRE  ++K
Sbjct: 527 AGAFPTWLAPVQVKVLPISDKYIKYGKKVQDTLNKAGIRADIDMRAEKIGYKIREAQMQK 586

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IP +++ G KE  +R + +R   +    + S+ + I  +T E
Sbjct: 587 IPYMLVVGAKEEEDRLVSVRSRFAGDEGQKSMDEFIASITSE 628


>gi|319946565|ref|ZP_08020800.1| threonine--tRNA ligase [Streptococcus australis ATCC 700641]
 gi|319747311|gb|EFV99569.1| threonine--tRNA ligase [Streptococcus australis ATCC 700641]
          Length = 647

 Score =  659 bits (1701), Expect = 0.0,   Method: Composition-based stats.
 Identities = 263/651 (40%), Positives = 408/651 (62%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  +  +GSIEI+
Sbjct: 1   MIKITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGSIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQ 121
           TP+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D +    S+++L +
Sbjct: 61  TPDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNQAGQISNEDLPR 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWF 180
           IE++MQ+I+  + P +++ ++ ++ARE+F+   + YK+E++E     E  +T+YRQGE+ 
Sbjct: 121 IEEEMQKIVKENFPSIREEVTKDEAREIFK--NDPYKLELIEEHSEDEGGLTIYRQGEYV 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ RIYGTAW  +++L  YL   EE
Sbjct: 179 DLCRGPHVPSTGRIQIFHLLH-VAGAYWRGNSDNAMMQRIYGTAWFDKKDLKNYLQMREE 237

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           +++RDHRKL +E+DLF I+++   G+ FW   G  I + L  Y+  +++   Y+ + TP 
Sbjct: 238 AKERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVDKELASGYQHVYTPP 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L++ SGHWD Y+ +MF          D   F L+PMNCP H+ VF H + SYREL
Sbjct: 298 LASVELYKTSGHWDHYQEDMFPTMDMG----DGEEFVLRPMNCPHHIQVFKHHVHSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y DF
Sbjct: 354 PIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYGDF 413

Query: 419 GFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
              +   +LS R      K   +D +W++A+ +++  LD +       ++     GE AF
Sbjct: 414 NLNEYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAF 467

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K A+G++    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF
Sbjct: 468 YGPKLDIQVKTALGKEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMIHRGVISTMERF 527

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
             I+IEN+KG  P WL+P Q  +  ++    V+YA E+A  L+   +  + D RNE + +
Sbjct: 528 TAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAKKLRDRGVRADVDERNEKMQF 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR     KIP  +I GDKE  + ++ +RR+G   T  VS+ + +  +  +
Sbjct: 588 KIRASQTSKIPYQLIVGDKEMEDGTVNVRRYGQKETNTVSVDEFVAAILAD 638


>gi|282916943|ref|ZP_06324701.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139]
 gi|283770747|ref|ZP_06343639.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
 gi|282319430|gb|EFB49782.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139]
 gi|283460894|gb|EFC07984.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
          Length = 645

 Score =  659 bits (1701), Expect = 0.0,   Method: Composition-based stats.
 Identities = 268/650 (41%), Positives = 402/650 (61%), Gaps = 21/650 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
             I + FPDG+ K F    T  D+A+SIS  L KKAVA   NG++ DL+ P+  +GSIEI
Sbjct: 2   EQINIQFPDGNKKAFDKGTTTEDIAQSISPGLRKKAVAGKFNGQLVDLTKPLETDGSIEI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +TP    +L V+RHS AH+MA A++ ++  V+  +GP+IE GFYYDFD +Q  SSD+  Q
Sbjct: 62  VTPGSEEALEVLRHSTAHLMAHAIKRLYGNVKFGVGPVIEGGFYYDFDIDQNISSDDFEQ 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK M++I+  +    ++ +S ++A+EL     + YK+E++++IP  ENVTLY QG++ D
Sbjct: 122 IEKTMKQIVNENMKIERKVVSRDEAKEL--FSNDEYKLELIDAIPEDENVTLYSQGDFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG HV ST ++K+F KL+  AGAYWRGDSN  ML RIYGTA+  + EL  +L  LEE 
Sbjct: 180 LCRGVHVPSTAKIKEF-KLLSTAGAYWRGDSNNKMLQRIYGTAFFDKNELKAHLQMLEER 238

Query: 242 EKRDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRK+ +E++LF +    G+G+  W   G  I + +  Y+  +++   Y+ + TP +
Sbjct: 239 KERDHRKIGKELELFTNSQLVGAGLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVL 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +  L++ SGHWD Y+ +MF     D+T     +  L+PMNCP H+ ++ +   SYRELP
Sbjct: 299 ANVDLYKTSGHWDHYQEDMFPPMQLDET----ESMVLRPMNCPHHMMIYANKPHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G+++R E SG++ GL RVRG T +D+H+F   +Q+  E  ++ N+II +YKDFG
Sbjct: 355 IRIAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVNMIIDVYKDFG 414

Query: 420 FEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           FE    +LS R      K    D +W+ AEN++K   D +  S ++ I      GE AFY
Sbjct: 415 FEDYSFRLSYRDPEDKEKYFDDDDMWNKAENMLKEAADELGLSYEEAI------GEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G++    T Q+DF LP RF+  Y+    E   PV+IHR V  ++ERF+
Sbjct: 469 GPKLDVQVKTAMGKEETLSTAQLDFLLPERFDLTYIGQDGEHHRPVVIHRGVVSTMERFV 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             + E  KG  P WL+P Q  +  +      +YA+++ + LKS  + +  D RNE + YK
Sbjct: 529 AFLTEETKGAFPTWLAPKQVQIIPVNVDLHYDYARQLQDELKSQGVRVSIDDRNEKMGYK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IRE  ++KIP  I+ GDKE     + +R++GS   + V   + I  L  E
Sbjct: 589 IREAQMQKIPYQIVVGDKEVENNQVNVRQYGSQDQETVEKDEFIWNLVDE 638


>gi|228921082|ref|ZP_04084417.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228838628|gb|EEM83934.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 640

 Score =  659 bits (1701), Expect = 0.0,   Method: Composition-based stats.
 Identities = 276/644 (42%), Positives = 432/644 (67%), Gaps = 17/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEII 62
            I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N  + DL   + E   +EII
Sbjct: 5   MIEIKFPDGSVKEFVKGITLEEIAGSISSSLKKKAVAGKVNDGLYDLRRNIEENAEVEII 64

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +    + + RHS AHI+A+AV+ ++ ++ + +GP+IE+GFYYD D     + ++L +I
Sbjct: 65  TIDSNEGVEIARHSAAHILAQAVKRMYGDINLGVGPVIENGFYYDMDLPSSVNMEDLRKI 124

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M++I   +    +  +S E+A +LF+   +  K+E+LE+IP+ E+VTLY+QGE+ DL
Sbjct: 125 EKEMKKITNENIKIERVEVSREEAAKLFQEMNDLLKLELLEAIPSGESVTLYKQGEFVDL 184

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ STG +K F     V+GAYWRGDSN  +L RIYG A+++Q+EL +YL+F+EE+ 
Sbjct: 185 CRGPHLPSTGYLKAFQLTH-VSGAYWRGDSNNQVLQRIYGVAFSSQKELEEYLHFVEEAA 243

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KR+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R  + +  Y+E+ TP +++
Sbjct: 244 KRNHRKLGSELELFMFSEEAPGMPFYLPKGQMIRNELEAFLREIQKEYKYQEVRTPFMMN 303

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           Q +W++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R
Sbjct: 304 QEVWERSGHWGHYKDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIR 357

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           + EFG V+R+E SG+L+GL+RVR F QDDAH+F T +Q+ +E   +   I  +YK FGFE
Sbjct: 358 MCEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPKQIEDEIKSVMAQIDYVYKTFGFE 417

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPE  +G D LW+ AE  ++ VL ++           +  G+GAFYGPK ++
Sbjct: 418 Y-EVELSTRPEDSMGDDKLWEQAEAALENVLQSLNY------KYRLNEGDGAFYGPKIDF 470

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+ R  QCGTIQ+DF +P +F+  Y++ ++EK  PV+IHRAV GS++RF+ I+IE+
Sbjct: 471 HIKDALNRSHQCGTIQLDFQMPEKFDLNYIDENNEKKRPVVIHRAVLGSLDRFLAILIEH 530

Query: 542 FKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           F G  P W++P+Q  V  ++++   +YA E+A+ L    + +E D R+E + YKIRE  +
Sbjct: 531 FGGAFPAWVAPVQVKVIPVSNAVHEQYASEVAHKLAQAGIRVEQDARDEKLGYKIREVQM 590

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +K+P +++ GDKE  + ++ +R++G   ++ V+L   +  + +E
Sbjct: 591 QKVPYVLVIGDKEMEKGAVNVRKYGEEKSEVVALDVFVASIEEE 634


>gi|78222623|ref|YP_384370.1| threonyl-tRNA synthetase [Geobacter metallireducens GS-15]
 gi|78193878|gb|ABB31645.1| Ser-tRNA(Thr) hydrolase [Geobacter metallireducens GS-15]
          Length = 645

 Score =  659 bits (1701), Expect = 0.0,   Method: Composition-based stats.
 Identities = 280/644 (43%), Positives = 412/644 (63%), Gaps = 18/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEII 62
           DIK+  PDGS +     AT  D+A SI   LAK A+A  ING   DL+ P+ +G  +EII
Sbjct: 12  DIKVALPDGSERVLAEGATVRDLAASIGAGLAKAAIAGKINGVAVDLTAPLVDGVKVEII 71

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T + P +L +IRHS +H+MA+AV+ ++P+ +V IGP +E+GFYYDFD +  F+ ++L +I
Sbjct: 72  TEKSPEALEIIRHSTSHLMAQAVKELFPQAKVTIGPAVENGFYYDFDVDHAFTPEDLEKI 131

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M+E+   D    +Q LS ++A +LF    E YKVE++E+I     V+LYRQG++ DL
Sbjct: 132 ETRMRELAKSDLKLERQVLSKDEAIKLFRDMGENYKVELIEAI-GDNTVSLYRQGDFVDL 190

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ ST   + F KL  +AGAYWRGD    ML R+YGTA+  ++EL  YL  +EE++
Sbjct: 191 CRGPHLPSTANCRAF-KLTSLAGAYWRGDEKNKMLQRVYGTAFADKKELDAYLERIEEAK 249

Query: 243 KRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVL 300
           +RDHRKL RE+DLF  +++   G + WH  G  +   L  + R   +K  Y+ +  PQ+L
Sbjct: 250 RRDHRKLGRELDLFSFSDEVGAGFVIWHPNGAMLRTILEDFERKEHLKRGYDIVVGPQIL 309

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
              LWQ+SGH+D+YR NM+  +       + ++F +KPMNC  H+ ++   L+SYR+LP+
Sbjct: 310 KTDLWQRSGHYDNYRENMYFTEV------EEQSFGIKPMNCLSHMMIYKSHLRSYRDLPL 363

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R  E G+V+R+E +G LHGL+RVR FTQDDAH+ CT EQ+ +E   + + +  +   FGF
Sbjct: 364 RFFELGTVHRHERAGVLHGLLRVRCFTQDDAHILCTPEQLDDEIKGVISFVNDVMGIFGF 423

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           E  M +LSTRPEK +GSD  W+ A N + G L              +  G+GAFYGPK +
Sbjct: 424 EFEM-ELSTRPEKSIGSDEDWERATNALLGALKDSGRP------YEINEGDGAFYGPKID 476

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
             L+D++ R WQC TIQ DF LP RF+  YV++  E+  PVM+HR + GSIERFIG++IE
Sbjct: 477 IKLRDSLDRRWQCATIQCDFTLPERFDLTYVDADGERKRPVMVHRVILGSIERFIGVLIE 536

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +F GN P+WLSP+QAIV T+T +   YA ++   L+S  + +  DFRNE + +KIRE  +
Sbjct: 537 HFAGNFPVWLSPVQAIVMTVTDNQQSYAAQVFEALRSSGIRVRKDFRNEKLGFKIREAQL 596

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +KIP +++ GDKE    ++  R    +    +   + +  + ++
Sbjct: 597 QKIPYMLVIGDKEVESGTVTPRFRDGSNLAAMKPEEFVVFINED 640


>gi|116872988|ref|YP_849769.1| threonyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|123458497|sp|A0AJ08|SYT_LISW6 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|116741866|emb|CAK20990.1| threonyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
          Length = 640

 Score =  659 bits (1701), Expect = 0.0,   Method: Composition-based stats.
 Identities = 262/648 (40%), Positives = 407/648 (62%), Gaps = 20/648 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K+TFPDG++K F    + +D+A SIS  L KKA+A  +NG++ DL  P+  +G+IEI+T
Sbjct: 1   MKITFPDGAVKEFEPGVSTADIAASISPGLKKKALAGKLNGELLDLVTPIHEDGAIEIVT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+   +L ++RHS AH+MA+A++ ++P+V+  +GP IE GFYYD D E   S + L +IE
Sbjct: 61  PDHEDALGILRHSTAHLMAQALKRLYPDVKFGVGPAIESGFYYDIDTEAVISDESLVEIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+MQ+I+  + P  ++ +S E+A + F++  + YK+E++E+IP  E VT+Y QGE+FDLC
Sbjct: 121 KEMQKIVRENVPIEREVVSREEAIKRFKAIGDQYKLELIEAIPKDETVTIYTQGEFFDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RG HV STG+++ F KL+ VAGAYWRGDSN  ML RIYGTA+  +  L +++   +E+++
Sbjct: 181 RGVHVPSTGKIQVF-KLLSVAGAYWRGDSNNKMLQRIYGTAFFDKNGLKEFIQMQKEAKE 239

Query: 244 RDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           RDHRKL +E++LF  + +   G+  W  KG  I + +  Y+  K +   Y  + TP + +
Sbjct: 240 RDHRKLGKELELFTNSIEVGQGLPLWLPKGATIRRVIERYIVDKEERLGYNHVYTPIMAN 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             L++ SGHWD Y  +MF     D+         L+PMNCP H+ ++ + + SYRELP+R
Sbjct: 300 VELYKTSGHWDHYHEDMFPTMKMDN-----EELVLRPMNCPHHMMIYKNDIHSYRELPIR 354

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AE G ++R E SG+L GL RVRG T +DAHVF   +Q+ +E  ++  LI+ +YKDF  +
Sbjct: 355 IAELGMMHRYEMSGALSGLQRVRGMTLNDAHVFVRPDQIKDEFKRVVELILEVYKDFDIK 414

Query: 422 KIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
               +LS R      K    DA+W+ A+ ++K  +D +       ++     GE AFYGP
Sbjct: 415 DYSFRLSYRDPKNTEKYFDDDAMWEKAQAMLKSAMDEMG------MDYFEAEGEAAFYGP 468

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  +K AIG++    T+Q+DF LP RF+  Y+    EK  PV+IHR V  ++ERF+  
Sbjct: 469 KLDVQVKTAIGKEETLSTVQLDFLLPERFDLTYIGEDGEKHRPVVIHRGVVSTMERFVAY 528

Query: 538 MIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +IE +KG  P WL+P+Q  +  +   + ++Y++ + + L+   L  E D RNE + YKIR
Sbjct: 529 LIEEYKGAFPTWLAPVQMELIPVNADAHLDYSKGVQDKLQRAGLRSEVDDRNEKLGYKIR 588

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           E   KKIP  ++ GD+E    S+ +RR+GS  ++ + L   I  +  E
Sbjct: 589 EAQTKKIPYALVLGDQEMEAGSVNVRRYGSKDSETMDLDAFIAQVVAE 636


>gi|157693298|ref|YP_001487760.1| threonyl-tRNA synthetase [Bacillus pumilus SAFR-032]
 gi|157682056|gb|ABV63200.1| threonine--tRNA ligase [Bacillus pumilus SAFR-032]
          Length = 646

 Score =  659 bits (1700), Expect = 0.0,   Method: Composition-based stats.
 Identities = 264/656 (40%), Positives = 416/656 (63%), Gaps = 23/656 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M   I+LTFPDG++K F   AT  D+A SIS  L KKA+A  +NGK  DL  P+   G+I
Sbjct: 1   MSEQIQLTFPDGAVKEFDKTATTEDIAASISPGLKKKALAGKLNGKEIDLRTPLLESGTI 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWP---EVQVAIGPIIEDGFYYDFDKEQPFSS 116
           EIIT +   +L ++RHS AH++A+A++ ++     VQ  +GP+IE+GFYYD D +   + 
Sbjct: 61  EIITDKSDEALDIMRHSTAHLLAQAIKRLYGKEHHVQFGVGPVIENGFYYDVDIDVAITP 120

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
           ++L +IEK+M++II  + P  +  +S E A++ FE+  +  K+E+LE+IP  E VT+Y Q
Sbjct: 121 EDLPKIEKEMKKIINSNLPIERIEVSREDAKKRFEAIGDQLKLELLEAIPEGEAVTIYEQ 180

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           GE+FDLCRG H+ STG++K+F KL+ +AGAYWRGDSN  ML RIYGTA+ ++ +L ++L 
Sbjct: 181 GEFFDLCRGIHLPSTGKIKEF-KLLSLAGAYWRGDSNNQMLQRIYGTAFFSKDDLNEHLR 239

Query: 237 FLEESEKRDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEI 294
            LEE+++RDHRKL +E+ LF +  + G G+  W  KG  I + +  Y+  ++++  YE +
Sbjct: 240 LLEEAKERDHRKLGKELKLFANSQKVGQGLPLWLPKGATIRRVIERYIVDKEVRLGYEHV 299

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
            TP + +  L++ SGHW  Y+ +MF V   D+         L+PMNCP H+ ++ +   S
Sbjct: 300 YTPVLANVELYKTSGHWAHYQEDMFPVMEMDN-----EDLVLRPMNCPHHMMIYKNEPHS 354

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YRELP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+ +E ++   LI  +
Sbjct: 355 YRELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKDEFIRTVRLIEEV 414

Query: 415 YKDFGFEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
           Y+DFG      +LS R      K    DA+W+ A++++K  +D + +      +     G
Sbjct: 415 YQDFGLNDYTFRLSYRDPEDTEKYFDDDAMWNKAQSMLKDAMDELGH------DYYEAEG 468

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           E AFYGPK +  +K A+G++    T+Q+DF LP RF+  Y+    +   PV+IHR V  +
Sbjct: 469 EAAFYGPKLDVQVKTALGKEETLSTVQLDFLLPERFDLTYIGEDGKHHRPVVIHRGVVST 528

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNE 589
           +ERF+  +IE +KG LP WL+P+Q  V  ++ S  ++YA+++   L+   L +E D R+E
Sbjct: 529 MERFVAFLIEEYKGALPTWLAPVQFQVIPVSPSVHLDYAKKVQERLQLEGLRVELDSRDE 588

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
            I YKIRE  ++KIP +++ GD+EA   ++ +R++G   ++ + L   +     E+
Sbjct: 589 KIGYKIREAQMQKIPYMLVVGDQEAENGAVNVRKYGEQDSETMDLEAFVKHAVAEA 644


>gi|169334538|ref|ZP_02861731.1| hypothetical protein ANASTE_00941 [Anaerofustis stercorihominis DSM
           17244]
 gi|169259255|gb|EDS73221.1| hypothetical protein ANASTE_00941 [Anaerofustis stercorihominis DSM
           17244]
          Length = 637

 Score =  659 bits (1700), Expect = 0.0,   Method: Composition-based stats.
 Identities = 267/645 (41%), Positives = 403/645 (62%), Gaps = 18/645 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+TFPDG+IK F    +  D+AESIS +L +  +   +N ++ D+   + ++ SI   
Sbjct: 1   MIKVTFPDGNIKEFENGVSVLDIAESISPALKRDVLCAKVNDEIVDIRTTLDKDASIVFY 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
             +D        H+ +HI+A+AV+ ++ + V++AIGP I++GFYYDFD E P + ++L +
Sbjct: 61  KFDDLEGKKAFWHTTSHILAQAVKRLYGDKVKLAIGPSIDNGFYYDFDIETPITENDLEK 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE +M++I+  +    K  L  ++A    +   E YKVE++E +P    ++ Y+QGE+ D
Sbjct: 121 IEAEMKKIVKENLSIEKFVLPRKEAIGFEKEANEDYKVELIEDLPEDSIISFYKQGEFTD 180

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LC GPH+ +T +  K  KL+   GAYWRGDSN+ ML R+YG ++   + L +YL  LEE+
Sbjct: 181 LCAGPHLLNT-KPVKAIKLLSTTGAYWRGDSNKKMLQRVYGISFPKAKLLEEYLAMLEEA 239

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVL 300
           +KRDHRK+ ++MDLF I E+G G  F+  KG  I   L ++ R + +   Y+EI TP +L
Sbjct: 240 KKRDHRKIGKDMDLFMICEEGPGFPFFLPKGMVIRNELENFWREEHRKRGYQEIKTPLIL 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ LW  SGHWD Y+ NM+  +  D+       +A+KPMNCPG + V+   + SYR+LP+
Sbjct: 300 NEQLWHTSGHWDHYKDNMYFTRIDDN------DYAIKPMNCPGSMLVYKRKMWSYRDLPL 353

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+ E G V+R+E SG+LHGLMRVR FTQDDAH+F   EQ+  E + + + I  +Y  FGF
Sbjct: 354 RIGEMGQVHRHELSGALHGLMRVRTFTQDDAHIFMLPEQIKEEVIGVIDFIDYVYNMFGF 413

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           +   V+LSTRP+  +GSD  W+ A   ++  ++      +  ++  V  G+GAFYGPK +
Sbjct: 414 KYH-VELSTRPDDSMGSDEDWNMATEALREAME------EKGMDYVVNEGDGAFYGPKLD 466

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           + L+D +GR WQCGTIQ+DF +P RF+  Y+    EK  PVMIHR +FGSIERFIGI+ E
Sbjct: 467 FHLEDCLGRTWQCGTIQLDFQMPQRFDLTYIGHDGEKHRPVMIHRVIFGSIERFIGILTE 526

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +F G  PLWL+P+QA +  IT   +EY + I + L+   +  E D R+E + YKIRE  +
Sbjct: 527 HFAGAFPLWLAPVQAKLIPITDRNLEYVKGIKDKLEQKGIRCEIDDRSEKMGYKIREAQL 586

Query: 601 KKIPIIIICGDKEASERSIGIRRF-GSTTTQKVSLLDAIPILTKE 644
           +K+P +II GD++     I +R          +S+ + I    KE
Sbjct: 587 EKVPYMIIAGDRDMENGVISVRARKDGEDLGAMSVDEFINKAVKE 631


>gi|331266854|ref|YP_004326484.1| threonyl-tRNA synthetase [Streptococcus oralis Uo5]
 gi|326683526|emb|CBZ01144.1| threonyl-tRNA synthetase [Streptococcus oralis Uo5]
          Length = 647

 Score =  659 bits (1700), Expect = 0.0,   Method: Composition-based stats.
 Identities = 263/651 (40%), Positives = 408/651 (62%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  +  +GSIEI+
Sbjct: 1   MIKITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGSIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQ 121
           TP+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D      S+++L +
Sbjct: 61  TPDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNTAGQISNEDLPR 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWF 180
           IE++MQ+I+  + P +++ ++ ++ARE+F+   + YK+E++E     E  +T+YRQGE+ 
Sbjct: 121 IEEEMQKIVKENFPSIREEVTKDEAREIFK--NDPYKLELIEEHSEDEGGLTIYRQGEYV 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ RIYGTAW  +++L  YL   EE
Sbjct: 179 DLCRGPHVPSTGRIQIFHLLH-VAGAYWRGNSDNAMMQRIYGTAWFDKKDLKNYLQMREE 237

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           +++RDHRKL +E+DLF I+++   G+ FW   G  I + L  Y+  +++   Y+ + TP 
Sbjct: 238 AKERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVDKELASGYQHVYTPP 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L++ SGHWD Y+ +MF          D   F L+PMNCP H+ VF H + SYREL
Sbjct: 298 LASVELYKTSGHWDHYQEDMFPTMDMG----DGEEFVLRPMNCPHHIQVFKHHVHSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y+DF
Sbjct: 354 PIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYEDF 413

Query: 419 GFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
              +   +LS R      K   +D +W++A+ +++  LD +       ++     GE AF
Sbjct: 414 NLNEYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAF 467

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K A+G++    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF
Sbjct: 468 YGPKLDIQVKTALGKEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMIHRGVISTMERF 527

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
             I+IEN+KG  P WL+P Q  +  ++    V+YA E+A  L+   +  + D RNE + +
Sbjct: 528 TAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAKKLRDRGVRADVDERNEKMQF 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR     KIP  +I GDKE  + ++ +RR+G   TQ V + + +  +  +
Sbjct: 588 KIRASQTSKIPYQLIVGDKEMEDGTVNVRRYGQKETQTVPVDEFVAAILAD 638


>gi|307709563|ref|ZP_07646017.1| threonyl-tRNA synthetase [Streptococcus mitis SK564]
 gi|307619694|gb|EFN98816.1| threonyl-tRNA synthetase [Streptococcus mitis SK564]
          Length = 647

 Score =  659 bits (1700), Expect = 0.0,   Method: Composition-based stats.
 Identities = 264/651 (40%), Positives = 409/651 (62%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  + ++GSIEI+
Sbjct: 1   MINITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITKDGSIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQ 121
           TP+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D      S+++L +
Sbjct: 61  TPDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNTAGQISNEDLPR 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWF 180
           IE++MQ+I+  + P +++ ++ ++ARE+F+   + YK+E++E     E  +T+YRQGE+ 
Sbjct: 121 IEEEMQKIVKENFPSIREEVTKDEAREIFK--NDPYKLELIEEHSEDEGGLTIYRQGEYV 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ RIYGTAW  +++L  YL   EE
Sbjct: 179 DLCRGPHVPSTGRIQIFHLLH-VAGAYWRGNSDNAMMQRIYGTAWFDKKDLKNYLQMREE 237

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           +++RDHRKL +E+DLF I+++   G+ FW   G  I + L  Y+  +++   Y+ + TP 
Sbjct: 238 AKERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVDKELASGYQHVYTPP 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L++ SGHWD Y+ +MF          D   F L+PMNCP H+ VF H + SYREL
Sbjct: 298 LASVELYKTSGHWDHYQEDMFPTMDMG----DGEEFVLRPMNCPHHIQVFKHHVHSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y+DF
Sbjct: 354 PIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYEDF 413

Query: 419 GFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
              +   +LS R      K   +D +W++A+ +++  LD +       ++     GE AF
Sbjct: 414 NLTEYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAF 467

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K A+G++    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF
Sbjct: 468 YGPKLDIQVKTALGKEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMIHRGVISTMERF 527

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
             I+IEN+KG  P WL+P Q  +  ++    V+YA E+A  L+   +  + D RNE + +
Sbjct: 528 TAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAKKLRDRGVRADVDERNEKMQF 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR     KIP  +I GDKE  + ++ +RR+G   TQ VS+ D +  +  +
Sbjct: 588 KIRASQTSKIPYQLIVGDKEMEDGTVNVRRYGQKETQTVSVDDFVQAILAD 638


>gi|251798759|ref|YP_003013490.1| threonyl-tRNA synthetase [Paenibacillus sp. JDR-2]
 gi|247546385|gb|ACT03404.1| threonyl-tRNA synthetase [Paenibacillus sp. JDR-2]
          Length = 645

 Score =  659 bits (1700), Expect = 0.0,   Method: Composition-based stats.
 Identities = 255/650 (39%), Positives = 402/650 (61%), Gaps = 21/650 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            I++TFPDG+++ +    T  +VA SIS  L K A+A  INGKV D+  P+  + +IEI+
Sbjct: 2   SIQVTFPDGAVREYAAGTTIEEVAGSISPGLRKNAIAGKINGKVVDVYSPIESDAAIEIV 61

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQ--VAIGPIIEDGFYYDFDKEQPFSSDELA 120
           T E    L V RHS AH+MA+A++ ++      + IGP+IEDGFYYD D EQ  + ++L 
Sbjct: 62  TVESADGLEVYRHSTAHLMAQAIKRLYGNANVKLGIGPVIEDGFYYDIDMEQSLTPEDLT 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IEK+MQ I+  +    ++ +S ++A  +F    +  K+E++  +P    +T+Y QGE+F
Sbjct: 122 KIEKEMQRIVNENLDIRRRVVSRDEALAIFTELDDNLKLELIRDLPEDSVITMYDQGEFF 181

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ STG++K F KL+ VAGAYWRGDS   ML RIYGTA+  + EL ++L+FLEE
Sbjct: 182 DLCRGPHLPSTGRIKAF-KLLSVAGAYWRGDSKNKMLQRIYGTAFAKKAELDEHLHFLEE 240

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           ++KRDHRKL +E+ +F  + +   G+  W   G K+ +TL  Y+   + +  YE + TP 
Sbjct: 241 AKKRDHRKLGKELKMFTFSREVGQGLPLWLPNGAKVRRTLERYIVDLEERLGYEHVYTPV 300

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           + +  L++ SGHW+ Y  +MF V   D+         L+PMNCP H+ V+   ++SYR+L
Sbjct: 301 LANVELYKISGHWEHYSEDMFPVMALDN-----EELVLRPMNCPHHMMVYKSDMRSYRDL 355

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           PVR+AE G+++R E SG+L GL RVR  T +DAH+FC  +Q+  E  ++ NLI  +Y+DF
Sbjct: 356 PVRIAEMGTMHRYEMSGALTGLHRVRAMTLNDAHIFCRPDQIKEEFARVVNLIRKVYEDF 415

Query: 419 GFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           G ++   +LS R  +       +D +W+ ++ +++ V++ +       +      GE AF
Sbjct: 416 GIKEYRFRLSYRDPQDTEKYFQNDEMWEMSQRMLREVVEELG------LPFFEAEGEAAF 469

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K A+G++    T Q+DF LP RF   Y+    +K  PV+IHR +  ++ER 
Sbjct: 470 YGPKLDVQIKTALGKEETLSTAQLDFLLPDRFELEYIGEDGKKHRPVVIHRGIISTMERM 529

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
              ++ENF G LPLWLSP+QA V  ++++   YA+E+   L+   + +E+D RNE + YK
Sbjct: 530 TAFLLENFAGALPLWLSPVQAKVIPVSTAYEAYAREVEEKLQLAGIRVESDLRNEKLGYK 589

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IRE  ++K+P +++ G+ EA   S+ +R+ G        + + + +L  E
Sbjct: 590 IREAQLEKLPYMLVVGENEAQSGSVSVRKRGEGDIGAKPVAELVELLQNE 639


>gi|323143349|ref|ZP_08078037.1| threonine--tRNA ligase [Succinatimonas hippei YIT 12066]
 gi|322416867|gb|EFY07513.1| threonine--tRNA ligase [Succinatimonas hippei YIT 12066]
          Length = 644

 Score =  659 bits (1700), Expect = 0.0,   Method: Composition-based stats.
 Identities = 282/650 (43%), Positives = 421/650 (64%), Gaps = 16/650 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            IK+T PDG+IK F    + +DVA SI   LA+  VA  I+G + D  D +  +  +EI+
Sbjct: 1   MIKITLPDGAIKEFDHAVSIADVASSIGPGLARNCVAGRIDGVLHDACDLIEHDAKVEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TP+D   + +IRHSCAH++  A++ +WPE ++AIGP+I++GFYYD D +   +++++  +
Sbjct: 61  TPKDKDGIEIIRHSCAHLLGHAIKELWPETKMAIGPVIDNGFYYDVDLDHKLTAEDMETL 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES-IPAKENVTLYRQGEWFD 181
           + KM E+   D   +K+ +  + A ++F+ + E YK  ILE  I   ++  LY   E+ D
Sbjct: 121 DAKMHELAKTDYKVIKEVVDWDTAYKVFDERNEPYKKLILEENIDKADHPALYHHLEYTD 180

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           +CRGPHV   G  + F KL   AGAYWRG+S   ML RIYGTAW T+ EL  YL   EE+
Sbjct: 181 MCRGPHVPRMGFCQNF-KLTHFAGAYWRGNSKNKMLQRIYGTAWATKDELKAYLKKREEA 239

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVL 300
            KRDHR L +++DLFH  ++  G++FWH  GW I++ + ++MR  +    Y E+ TPQ++
Sbjct: 240 AKRDHRVLGKKLDLFHFQQEAPGMVFWHNDGWTIYRVIENFMREMLHKYHYIEVKTPQIM 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D+ LW++SGHWD Y  NMF       T  + R +A+KPMNCPG + +FN   +SYR+LP+
Sbjct: 300 DRVLWERSGHWDKYAENMFT------TSSENRDYAIKPMNCPGAIQIFNSRTRSYRDLPI 353

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AEFG+ +RNEPSGSLHGL+RVR F QDDAH+FCT++Q+  E      ++   Y +FGF
Sbjct: 354 RMAEFGNCHRNEPSGSLHGLLRVRAFEQDDAHIFCTEDQIMTEVSDCIRMVYDTYSNFGF 413

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
            K+ VKLSTRPEKR+GSD +WD AE  +   L        + +   +  GEGAFYGPK E
Sbjct: 414 TKVDVKLSTRPEKRIGSDEIWDKAEADLVEALKL------NNLEYELQPGEGAFYGPKIE 467

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           + L D++ R WQCGT+Q+DF+LP+R +A Y+   +++  PVMIHRA+ GSIERF+G++ E
Sbjct: 468 FTLHDSLDRAWQCGTVQLDFSLPARLDAHYIGEDNQEHTPVMIHRAMLGSIERFLGVLTE 527

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
            F G+ P WL+PIQA+V  IT   V+Y +++A  L    + +++D RN+ + +KIREH++
Sbjct: 528 EFAGSFPTWLAPIQAVVMNITDGQVDYVKQVAQKLDEAGIRVKSDLRNDKVGFKIREHTL 587

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDC 650
             +P +++CGD+EA    + +R         + L D I ++  + +  + 
Sbjct: 588 MHVPYMLVCGDREAESGMVAVRTRKGQDLGAMKLDDLIKMIKSDIISRNL 637


>gi|289167501|ref|YP_003445770.1| Threonyl-tRNA synthetase, threonine-tRNA ligase [Streptococcus
           mitis B6]
 gi|288907068|emb|CBJ21902.1| Threonyl-tRNA synthetase, threonine-tRNA ligase [Streptococcus
           mitis B6]
          Length = 647

 Score =  659 bits (1700), Expect = 0.0,   Method: Composition-based stats.
 Identities = 264/651 (40%), Positives = 408/651 (62%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  +  +GSIEI+
Sbjct: 1   MINITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGSIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQ 121
           TP+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D      S+++L +
Sbjct: 61  TPDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNSAGQISNEDLPR 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWF 180
           IE++MQ+I+  + P +++ ++ ++ARE+F+   + YK+E++E     E  +T+YRQGE+ 
Sbjct: 121 IEEEMQKIVKENFPSIREEVTKDEAREIFK--NDPYKLELIEEHSEDEGGLTIYRQGEYV 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ RIYGTAW  +++L  YL   EE
Sbjct: 179 DLCRGPHVPSTGRIQIFHLLH-VAGAYWRGNSDNAMMQRIYGTAWFDKKDLKNYLQMREE 237

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           +++RDHRKL +E+DLF I+++   G+ FW   G  I + L  Y+  +++   Y+ + TP 
Sbjct: 238 AKERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVDKEVAAGYQHVYTPP 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L++ SGHWD YR +MF          D   F L+PMNCP H+ V+ H + SYREL
Sbjct: 298 IASVELYKTSGHWDHYREDMFPPMDMG----DGEEFVLRPMNCPHHIEVYKHHVHSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y+DF
Sbjct: 354 PIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYEDF 413

Query: 419 GFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
              +   +LS R      K   +D +W++A+ +++  LD +       ++     GE AF
Sbjct: 414 NLTEYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAF 467

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K A+G++    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF
Sbjct: 468 YGPKLDIQVKTALGKEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMIHRGVISTMERF 527

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
             I+IEN+KG  P WL+P Q  +  ++    V+YA E+A  L+   +  + D RNE + +
Sbjct: 528 TAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAKKLRDRGVRADVDERNEKMQF 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR     KIP  +I GDKE  + ++ +RR+G   TQ VS+ D +  +  +
Sbjct: 588 KIRASQTSKIPYQLIVGDKEMEDGTVNVRRYGQKETQTVSVDDFVQAILAD 638


>gi|107102275|ref|ZP_01366193.1| hypothetical protein PaerPA_01003332 [Pseudomonas aeruginosa PACS2]
          Length = 621

 Score =  659 bits (1700), Expect = 0.0,   Method: Composition-based stats.
 Identities = 281/622 (45%), Positives = 419/622 (67%), Gaps = 15/622 (2%)

Query: 24  SDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIRHSCAHIMA 82
           ++VA+SI   LAK  +A  ++G++ D  D + R+ +++IITP+D   L +IRHSCAH++ 
Sbjct: 2   AEVAQSIGAGLAKATLAGKVDGRLVDACDTIDRDATLQIITPKDEEGLEIIRHSCAHLVG 61

Query: 83  EAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLS 142
            AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A I+++M+E+I +D   +K+   
Sbjct: 62  HAVKQLYPTAKMVIGPVIEEGFYYDIFFERPFTPEDMAAIQQRMRELIDKDYDVIKKMTP 121

Query: 143 HEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMK 202
             +  ELF+S+ E YK+ +++ +P ++ + LY   E+ D+CRGPHV +T  +K F    K
Sbjct: 122 RAEVIELFKSRGEDYKLRLIDDMPDEKAMGLYFHEEYVDMCRGPHVPNTRFLKAFQLT-K 180

Query: 203 VAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDG 262
           ++GAYWRGDS    L RIYGTAW  +++L  Y+  +EE+EKRDHR++ +++DLFH+ E+ 
Sbjct: 181 ISGAYWRGDSKNEQLQRIYGTAWADKKQLAAYIQRIEEAEKRDHRRIGKQLDLFHLQEEA 240

Query: 263 SGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
            G++FWH  GW ++Q L  YMR+ +    Y E+ TPQV+D+ LW++SGHW +Y  NMF  
Sbjct: 241 PGMVFWHPNGWSVYQVLEQYMRKVQRDHGYVEVRTPQVVDRILWERSGHWSNYAENMFT- 299

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
                T  + R +A+KPMNCP HV +FN GLKSYR+LP+RLAEFG+ +RNEPSG+LHG+M
Sbjct: 300 -----TSSESRDYAVKPMNCPCHVQIFNQGLKSYRDLPLRLAEFGACHRNEPSGALHGIM 354

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALW 441
           RVRGFTQDDAH+FCT+EQ+  E      L + +Y+DFGF  I +KLSTRP KRVGSD LW
Sbjct: 355 RVRGFTQDDAHIFCTEEQVKKEAADFIKLTLQVYRDFGFTDIAMKLSTRPAKRVGSDELW 414

Query: 442 DDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFN 501
           D AE  +   L+      +  +      GEGAFYGPK E+ LKD +GR+WQCGT+Q D N
Sbjct: 415 DRAEGALADALN------ESGLAWEYQPGEGAFYGPKIEFTLKDCLGRNWQCGTLQYDPN 468

Query: 502 LPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT 561
           LP R +A Y+   + +  PVM+HRA+ GS ERFIG++IE++ G  P WL+P QA+V  IT
Sbjct: 469 LPERLDASYIAEDNNRKRPVMLHRAILGSFERFIGMLIEHYAGAFPAWLAPTQAVVMNIT 528

Query: 562 SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
               ++A E+  +L       ++D RNE I +KIREH++ K+P +++ GD+E   +++ +
Sbjct: 529 DKQADFAAEVVRILGESGFRAKSDLRNEKIGFKIREHTLLKVPYLLVIGDREVESKAVAV 588

Query: 622 RRFGSTTTQKVSLLDAIPILTK 643
           R         + +     +L +
Sbjct: 589 RTREGEDLGSMPVTQFAELLAQ 610


>gi|229087132|ref|ZP_04219282.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-44]
 gi|228696200|gb|EEL49035.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-44]
          Length = 643

 Score =  659 bits (1700), Expect = 0.0,   Method: Composition-based stats.
 Identities = 249/652 (38%), Positives = 404/652 (61%), Gaps = 20/652 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           M   +K+TFPDG++K FP   T  ++A SIS  L KKAVA  +N ++ DLS P+  +G++
Sbjct: 1   MADVVKITFPDGAVKEFPKGVTTEEIAASISPGLKKKAVAGKLNDEMIDLSTPIEEDGAV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +    L ++RHS AH++A+A++ ++ +V++ IGP+IE+GFYYD D E+  + ++ 
Sbjct: 61  SIITLDSEEGLYILRHSTAHLLAQALKRLYKDVKLGIGPVIENGFYYDIDMEEAITVEDF 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IEK+MQ+I+  +   ++  +   +A   +E   +  K++++  +P    +++Y QGE+
Sbjct: 121 KKIEKEMQKIVNENLEIVRHEVPRAEALRRYEEIGDELKLDLINDLPEDAVISIYEQGEF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRG H+ STG++K F KL+ VAGAYWRGDS+  ML RIYGTA+  + EL ++L  LE
Sbjct: 181 FDLCRGVHLPSTGKIKVF-KLLSVAGAYWRGDSDNKMLQRIYGTAFVKKAELDEHLRMLE 239

Query: 240 ESEKRDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTP 297
           E+++RDHRKL +E+ LF +  + G G+  W  KG  I + +  Y+  ++    Y+ + TP
Sbjct: 240 EAKERDHRKLGKELKLFTNSQKVGQGLPLWLPKGATIRRIIERYIVDKEASLGYDHVYTP 299

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +  + L++ SGHW+ YR  MF     D+         L+PMNCP H+ V+ + + SYRE
Sbjct: 300 VLGSRELYETSGHWNHYRDGMFPSMEMDN-----EELVLRPMNCPHHMMVYKNDIHSYRE 354

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+  E  ++ NL + +YKD
Sbjct: 355 LPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVYKD 414

Query: 418 FGFEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           FG E    +LS R      K    D +W+ A++++K  +D +       +      GE A
Sbjct: 415 FGLENYSFRLSYRDPADTKKYYADDEMWEKAQSMLKEAMDEMG------LEYYEAEGEAA 468

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  ++ A+G+D    T+Q+DF LP RF   YV    ++  PV+IHR V  ++ER
Sbjct: 469 FYGPKLDVQVRTALGKDETLSTVQLDFLLPERFELTYVGEDGKQHRPVVIHRGVVSTMER 528

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETIN 592
           F+  +IE +KG  P WL+P+Q  V  ++    ++YA+++   L+   + +E D R E I 
Sbjct: 529 FVAFLIEEYKGAFPTWLAPVQVQVIPVSPQVHLDYAKKVQEELQRAGIRVEVDTREEKIG 588

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           YKIRE  ++KIP +++ GD E +E  + +R++G   ++ ++L   + ++  E
Sbjct: 589 YKIREAQMQKIPYMLVVGDNEVTENGVNVRKYGEQKSETIALDAFVEMIKVE 640


>gi|21283355|ref|NP_646443.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
 gi|49483925|ref|YP_041149.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|49486509|ref|YP_043730.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57650554|ref|YP_186567.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
 gi|87161367|ref|YP_494324.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|148268163|ref|YP_001247106.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|150394230|ref|YP_001316905.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|151221788|ref|YP_001332610.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|161509896|ref|YP_001575555.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|221142567|ref|ZP_03567060.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           JKD6009]
 gi|253317174|ref|ZP_04840387.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           CF-Marseille]
 gi|253732334|ref|ZP_04866499.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253734533|ref|ZP_04868698.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|257425798|ref|ZP_05602222.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257428464|ref|ZP_05604862.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257431098|ref|ZP_05607475.1| threonyl-tRNA synthetase 1 [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257433781|ref|ZP_05610139.1| threonyl-tRNA synthetase 1 [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257436697|ref|ZP_05612741.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876]
 gi|257794068|ref|ZP_05643047.1| threonyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|258415772|ref|ZP_05682043.1| threonyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|258421991|ref|ZP_05684911.1| threonyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|258424099|ref|ZP_05686981.1| threonyl-tRNA synthetase [Staphylococcus aureus A9635]
 gi|258438251|ref|ZP_05689535.1| threonyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|258443709|ref|ZP_05692048.1| threonyl-tRNA synthetase [Staphylococcus aureus A8115]
 gi|258445920|ref|ZP_05694096.1| threonyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|258448399|ref|ZP_05696516.1| threonyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|258451803|ref|ZP_05699825.1| threonyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|258454120|ref|ZP_05702091.1| threonyl-tRNA synthetase/Ser-tRNA(Thr) hydrolase [Staphylococcus
           aureus A5937]
 gi|269203301|ref|YP_003282570.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98]
 gi|282893178|ref|ZP_06301412.1| threonyl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|282904254|ref|ZP_06312142.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|282908994|ref|ZP_06316812.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282911310|ref|ZP_06319112.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282914479|ref|ZP_06322265.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282919448|ref|ZP_06327183.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427]
 gi|282920223|ref|ZP_06327948.1| threonyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|282924825|ref|ZP_06332491.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101]
 gi|282927813|ref|ZP_06335424.1| threonyl-tRNA synthetase [Staphylococcus aureus A10102]
 gi|283958434|ref|ZP_06375885.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|284024731|ref|ZP_06379129.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 132]
 gi|293503557|ref|ZP_06667404.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           58-424]
 gi|293510572|ref|ZP_06669277.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809]
 gi|293537114|ref|ZP_06671794.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|294848704|ref|ZP_06789450.1| threonyl-tRNA synthetase [Staphylococcus aureus A9754]
 gi|295405993|ref|ZP_06815801.1| threonyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|295428254|ref|ZP_06820883.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|296274890|ref|ZP_06857397.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MR1]
 gi|297207604|ref|ZP_06924039.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|297245081|ref|ZP_06928958.1| threonyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|297590783|ref|ZP_06949421.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|300911686|ref|ZP_07129130.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
 gi|304380726|ref|ZP_07363395.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|38258392|sp|Q8NW68|SYT_STAAW RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|56749381|sp|Q6G8P3|SYT_STAAS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|56749410|sp|Q6GG23|SYT_STAAR RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|71153575|sp|Q5HF90|SYT_STAAC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|123735974|sp|Q2FG54|SYT_STAA3 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|172048941|sp|A6QHL6|SYT_STAAE RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|189083625|sp|A6U2F0|SYT_STAA2 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|189083626|sp|A5ITK7|SYT_STAA9 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|189083627|sp|A8Z2J8|SYT_STAAT RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|38492559|pdb|1NYQ|A Chain A, Structure Of Staphylococcus Aureus Threonyl-Trna
           Synthetase Complexed With An Analogue Of Threonyl
           Adenylate
 gi|38492560|pdb|1NYQ|B Chain B, Structure Of Staphylococcus Aureus Threonyl-Trna
           Synthetase Complexed With An Analogue Of Threonyl
           Adenylate
 gi|38492561|pdb|1NYR|A Chain A, Structure Of Staphylococcus Aureus Threonyl-Trna
           Synthetase Complexed With Atp
 gi|38492562|pdb|1NYR|B Chain B, Structure Of Staphylococcus Aureus Threonyl-Trna
           Synthetase Complexed With Atp
 gi|21204795|dbj|BAB95491.1| threonyl-tRNA synthetase 1 [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49242054|emb|CAG40753.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|49244952|emb|CAG43413.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57284740|gb|AAW36834.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
 gi|87127341|gb|ABD21855.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|147741232|gb|ABQ49530.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Staphylococcus
           aureus subsp. aureus JH9]
 gi|149946682|gb|ABR52618.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|150374588|dbj|BAF67848.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|160368705|gb|ABX29676.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|253723934|gb|EES92663.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253727474|gb|EES96203.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|257271492|gb|EEV03638.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257275305|gb|EEV06792.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257278046|gb|EEV08694.1| threonyl-tRNA synthetase 1 [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257281874|gb|EEV12011.1| threonyl-tRNA synthetase 1 [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257284048|gb|EEV14171.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876]
 gi|257788040|gb|EEV26380.1| threonyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|257839365|gb|EEV63838.1| threonyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|257842035|gb|EEV66464.1| threonyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|257845720|gb|EEV69752.1| threonyl-tRNA synthetase [Staphylococcus aureus A9635]
 gi|257848295|gb|EEV72286.1| threonyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|257851115|gb|EEV75058.1| threonyl-tRNA synthetase [Staphylococcus aureus A8115]
 gi|257855162|gb|EEV78101.1| threonyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|257858367|gb|EEV81252.1| threonyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|257860515|gb|EEV83341.1| threonyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|257863572|gb|EEV86329.1| threonyl-tRNA synthetase/Ser-tRNA(Thr) hydrolase [Staphylococcus
           aureus A5937]
 gi|262075591|gb|ACY11564.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98]
 gi|269941163|emb|CBI49550.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TW20]
 gi|282313191|gb|EFB43587.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101]
 gi|282317258|gb|EFB47632.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427]
 gi|282321660|gb|EFB51985.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282325005|gb|EFB55315.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282327258|gb|EFB57553.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282590323|gb|EFB95402.1| threonyl-tRNA synthetase [Staphylococcus aureus A10102]
 gi|282594571|gb|EFB99556.1| threonyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|282595872|gb|EFC00836.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|282764496|gb|EFC04622.1| threonyl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|283790583|gb|EFC29400.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|285817366|gb|ADC37853.1| Threonyl-tRNA synthetase [Staphylococcus aureus 04-02981]
 gi|290919959|gb|EFD97027.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|291095223|gb|EFE25488.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           58-424]
 gi|291466463|gb|EFF08984.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809]
 gi|294824730|gb|EFG41153.1| threonyl-tRNA synthetase [Staphylococcus aureus A9754]
 gi|294968990|gb|EFG45011.1| threonyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|295127654|gb|EFG57291.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|296887621|gb|EFH26519.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|297178161|gb|EFH37409.1| threonyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|297575669|gb|EFH94385.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|300887107|gb|EFK82308.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
 gi|302333348|gb|ADL23541.1| threonyl-tRNA synthetase 1 [Staphylococcus aureus subsp. aureus
           JKD6159]
 gi|302751509|gb|ADL65686.1| threonyl-tRNA synthetase 1 [Staphylococcus aureus subsp. aureus
           str. JKD6008]
 gi|304340725|gb|EFM06656.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|312437859|gb|ADQ76930.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH60]
 gi|312830061|emb|CBX34903.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ECT-R
           2]
 gi|315130684|gb|EFT86670.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus CGS03]
 gi|315195587|gb|EFU25974.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus CGS00]
 gi|315198621|gb|EFU28949.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus CGS01]
 gi|320140439|gb|EFW32293.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA131]
 gi|320143977|gb|EFW35746.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA177]
 gi|329314355|gb|AEB88768.1| Threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           T0131]
 gi|329727674|gb|EGG64130.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus 21172]
          Length = 645

 Score =  659 bits (1699), Expect = 0.0,   Method: Composition-based stats.
 Identities = 268/650 (41%), Positives = 403/650 (62%), Gaps = 21/650 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
             I + FPDG+ K F    T  D+A+SIS  L KKAVA   NG++ DL+ P+  +GSIEI
Sbjct: 2   EQINIQFPDGNKKAFDKGTTTEDIAQSISPGLRKKAVAGKFNGQLVDLTKPLETDGSIEI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +TP    +L V+RHS AH+MA A++ ++  V+  +GP+IE GFYYDFD +Q  SSD+  Q
Sbjct: 62  VTPGSEEALEVLRHSTAHLMAHAIKRLYGNVKFGVGPVIEGGFYYDFDIDQNISSDDFEQ 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK M++I+  +    ++ +S ++A+EL     + YK+E++++IP  ENVTLY QG++ D
Sbjct: 122 IEKTMKQIVNENMKIERKVVSRDEAKEL--FSNDEYKLELIDAIPEDENVTLYSQGDFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG HV ST ++K+F KL+  AGAYWRGDSN  ML RIYGTA+  ++EL  +L  LEE 
Sbjct: 180 LCRGVHVPSTAKIKEF-KLLSTAGAYWRGDSNNKMLQRIYGTAFFDKKELKAHLQMLEER 238

Query: 242 EKRDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRK+ +E++LF +    G+G+  W   G  I + +  Y+  +++   Y+ + TP +
Sbjct: 239 KERDHRKIGKELELFTNSQLVGAGLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVL 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +  L++ SGHWD Y+ +MF     D+T     +  L+PMNCP H+ ++ +   SYRELP
Sbjct: 299 ANVDLYKTSGHWDHYQEDMFPPMQLDET----ESMVLRPMNCPHHMMIYANKPHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G+++R E SG++ GL RVRG T +D+H+F   +Q+  E  ++ N+II +YKDFG
Sbjct: 355 IRIAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVNMIIDVYKDFG 414

Query: 420 FEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           FE    +LS R      K    D +W+ AEN++K   D +  S ++ I      GE AFY
Sbjct: 415 FEDYSFRLSYRDPEDKEKYFDDDDMWNKAENMLKEAADELGLSYEEAI------GEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G++    T Q+DF LP RF+  Y+    E   PV+IHR V  ++ERF+
Sbjct: 469 GPKLDVQVKTAMGKEETLSTAQLDFLLPERFDLTYIGQDGEHHRPVVIHRGVVSTMERFV 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             + E  KG  P WL+P Q  +  +      +YA+++ + LKS  + +  D RNE + YK
Sbjct: 529 AFLTEETKGAFPTWLAPKQVQIIPVNVDLHYDYARQLQDELKSQGVRVSIDDRNEKMGYK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IRE  ++KIP  I+ GDKE     + +R++GS   + V   + I  L  E
Sbjct: 589 IREAQMQKIPYQIVVGDKEVENNQVNVRQYGSQDQETVEKDEFIWNLVDE 638


>gi|317121664|ref|YP_004101667.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Thermaerobacter
           marianensis DSM 12885]
 gi|315591644|gb|ADU50940.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Thermaerobacter
           marianensis DSM 12885]
          Length = 644

 Score =  659 bits (1699), Expect = 0.0,   Method: Composition-based stats.
 Identities = 275/638 (43%), Positives = 416/638 (65%), Gaps = 16/638 (2%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIE 60
           P+ I +  PDGS +  P   T  +VA+ I   LA+ AVA   NG++ DL+ P+  +G +E
Sbjct: 5   PARIVVELPDGSKREVPRGITPLEVAQQIGPRLARDAVAARWNGQIVDLNRPLEEDGRLE 64

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           I+T  D     V RHS AH+MA+AV+ +WPE Q+A+GP +EDGF+YD +  +P S+D+L 
Sbjct: 65  ILTFADEAGREVYRHSTAHLMAQAVKRLWPEAQLAVGPPLEDGFFYDIETPRPLSTDDLE 124

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEK+M  I+A D P  ++ +S ++A +LF ++ E YK+EI+E+IP  E +T+Y QGE+ 
Sbjct: 125 AIEKEMARIVAEDLPIRRRPVSRQEALDLFRARGERYKIEIIEAIPEDEPLTVYEQGEFV 184

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ STG++K F KL  VAGAYW+GD   PML+RIYGT++ + +EL ++L  LEE
Sbjct: 185 DLCRGPHLPSTGRIKAF-KLTGVAGAYWKGDETGPMLTRIYGTSFPSAKELEEHLERLEE 243

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           +++RDHRKL  E+DLFH  E   G  FWH KG  ++  L  + R  + +  Y+E+ TP++
Sbjct: 244 AKRRDHRKLGPELDLFHFEEIAPGYAFWHPKGATVYGLLERFSRELQARYGYQEVRTPEI 303

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           L   LW +SGHW+ YR NMF ++      ++   F +KPMNCPGH  ++   ++SYR+LP
Sbjct: 304 LKVDLWHRSGHWEHYRENMFLIE------REGAQFGVKPMNCPGHCLIYRSRIRSYRDLP 357

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +RLAE+G + R E SG+LHGL+RVRGF QDDAH+F  ++Q+  E  ++  L+ +IY  F 
Sbjct: 358 LRLAEYGRLARFERSGTLHGLLRVRGFEQDDAHLFVREDQIEEEIGRVLELVDAIYGTFD 417

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
               + KL+TRP+K +G  ALW+ AE  +   L+             +  G+GAFYGPK 
Sbjct: 418 MRYEI-KLATRPDKFMGEPALWERAEAALARALEAAGRQ------YSLAPGDGAFYGPKL 470

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           ++ + D++GR WQ  T+Q+DF +P RF+  YV++  ++  PVMIHRA+ GS+ERFIGI+I
Sbjct: 471 DFYVIDSLGRKWQTATVQLDFQMPIRFDLTYVDASGQEQRPVMIHRAIMGSLERFIGILI 530

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E++ G  P+WL+P+Q  V  ++    +YA+ +   L++  L +E D R+E + YKIR+  
Sbjct: 531 EHYAGAFPVWLAPVQVRVLPVSDRHHDYARRVEERLRAEGLRVEVDARDEKLGYKIRQAQ 590

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
           ++K+P +++ GD+EA E ++ +R           L   
Sbjct: 591 VEKVPYMLVVGDREAQEGTVAVRSRDRGDLGSQPLEAF 628


>gi|270293200|ref|ZP_06199411.1| threonine--tRNA ligase [Streptococcus sp. M143]
 gi|270279179|gb|EFA25025.1| threonine--tRNA ligase [Streptococcus sp. M143]
          Length = 647

 Score =  659 bits (1699), Expect = 0.0,   Method: Composition-based stats.
 Identities = 264/651 (40%), Positives = 408/651 (62%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  +  +GSIEI+
Sbjct: 1   MIKITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGSIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQ 121
           TP+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D +    S+++L +
Sbjct: 61  TPDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNQAGQISNEDLPR 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWF 180
           IE++MQ+I+  + P +++ ++ ++ARE+F+   + YK+E++E     E  +T+YRQGE+ 
Sbjct: 121 IEEEMQKIVKENFPSIREEVTKDEAREIFK--NDPYKLELIEEHSEDEGGLTIYRQGEYV 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ RIYGTAW  +++L  YL   EE
Sbjct: 179 DLCRGPHVPSTGRIQIFHLLH-VAGAYWRGNSDNAMMQRIYGTAWFDKKDLKNYLQMREE 237

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           +++RDHRKL +E+DLF I+++   G+ FW   G  I + L  Y+  ++I   Y+ + TP 
Sbjct: 238 AKERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVDKEIAAGYQHVYTPP 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L++ SGHWD YR +MF          D   F L+PMNCP H+ VF H + SYREL
Sbjct: 298 IASVELYKTSGHWDHYREDMFPTMDMG----DGEEFVLRPMNCPHHIQVFKHHVHSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y+DF
Sbjct: 354 PIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYEDF 413

Query: 419 GFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
              +   +LS R      K   +D +W++A+ +++  LD +       ++     GE AF
Sbjct: 414 NLTEYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAF 467

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K A+G++    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF
Sbjct: 468 YGPKLDIQVKTALGKEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMIHRGVISTMERF 527

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
             I+IEN+KG  P WL+P Q  +  ++    V+YA E+A  L+   +  + D RNE + +
Sbjct: 528 TAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAKKLRDRGVRADVDERNEKMQF 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR     KIP  +I GDKE  + ++ +RR+G   T  V + + +  +  +
Sbjct: 588 KIRASQTSKIPYQLIVGDKEMEDGTVNVRRYGQKETNTVPVDEFVSAILAD 638


>gi|283470950|emb|CAQ50161.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ST398]
          Length = 645

 Score =  658 bits (1698), Expect = 0.0,   Method: Composition-based stats.
 Identities = 268/650 (41%), Positives = 404/650 (62%), Gaps = 21/650 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
             I + FPDG+ K F    T  D+A+SIS  L KKAVA   NG++ DL++P+  +GSIEI
Sbjct: 2   EQINIQFPDGNKKAFDKGTTTEDIAQSISPGLRKKAVAGKFNGQLVDLTEPLETDGSIEI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +TP    +L V+RHS AH+MA A++ ++  V+  +GP+IE GFYYDFD +Q  SSD+  Q
Sbjct: 62  VTPGSEEALEVLRHSTAHLMAHAIKRLYGNVKFGVGPVIEGGFYYDFDIDQNISSDDFEQ 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK M++I+  +    ++ +S ++A+EL     + YK+E++++IP  ENVTLY QG++ D
Sbjct: 122 IEKTMKQIVNENMKIERKVVSRDEAKEL--FSNDEYKLELIDAIPEDENVTLYSQGDFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG HV ST ++K+F KL+  AGAYWRGDSN  ML RIYGTA+  ++EL  +L  LEE 
Sbjct: 180 LCRGVHVPSTAKIKEF-KLLSTAGAYWRGDSNNKMLQRIYGTAFFDKKELKAHLQMLEER 238

Query: 242 EKRDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRK+ +E++LF +    G+G+  W   G  I + +  Y+  +++   Y+ + TP +
Sbjct: 239 KERDHRKIGKELELFTNSQLVGAGLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVL 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +  L++ SGHWD Y+ +MF     D+T     +  L+PMNCP H+ ++ +   SYRELP
Sbjct: 299 ANVDLYKTSGHWDHYQEDMFPPMQLDET----ESMVLRPMNCPHHMMIYANKPHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G+++R E SG++ GL RVRG T +D+H+F   +Q+  E  ++ N+II +YKDFG
Sbjct: 355 IRIAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVNMIIDVYKDFG 414

Query: 420 FEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           FE    +LS R      K    D +W+ AEN++K   D +  S ++ I      GE AFY
Sbjct: 415 FEDYSFRLSYRDPEDKEKYFDDDDMWNKAENMLKEAADELGLSYEEAI------GEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G++    T Q+DF LP RF+  Y+    E   PV+IHR V  ++ERF+
Sbjct: 469 GPKLDVQVKTAMGKEETLSTAQLDFLLPERFDLTYIGQDGEHHRPVVIHRGVVSTMERFV 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             + E  KG  P WL+P Q  +  +      +YA+++ + LKS  + +  D RNE + YK
Sbjct: 529 AFLTEETKGAFPTWLAPKQVQIIPVNIDLHYDYARQLQDELKSQGVRVSIDDRNEKMGYK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IRE  ++KIP  I+ GDKE     + +R++GS   + V   + I  L  E
Sbjct: 589 IREAQMQKIPYQIVVGDKEVENNQVNVRQYGSQDQETVEKDEFIWNLVDE 638


>gi|126729010|ref|ZP_01744825.1| threonyl-tRNA synthetase [Sagittula stellata E-37]
 gi|126710940|gb|EBA09991.1| threonyl-tRNA synthetase [Sagittula stellata E-37]
          Length = 660

 Score =  658 bits (1698), Expect = 0.0,   Method: Composition-based stats.
 Identities = 328/663 (49%), Positives = 438/663 (66%), Gaps = 22/663 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           + I LTFPDG+ ++F    T ++VA SIS+SL KKA++  ++G   DL  P+  + +I I
Sbjct: 2   AQISLTFPDGTQRSFDKGVTPAEVAASISKSLGKKAISAQVDGAHYDLQWPIETDAAIAI 61

Query: 62  IT-PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            T  +D  +L +IRH  AHIMA AVQ IWP+V+V IGP+IE G+YYDFD+ +PF+ ++L 
Sbjct: 62  NTLADDGPALELIRHDLAHIMARAVQEIWPDVKVTIGPVIEHGWYYDFDRAEPFTPEDLG 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-ENVTLYRQGEW 179
            IEKKM+EII    P   +  S   A   +E   E YKVE++ +IP   + + +Y  G+W
Sbjct: 122 LIEKKMKEIINARDPVRTEVWSRADAIAHYEKTGENYKVELVNAIPDDGQPIRMYWHGDW 181

Query: 180 FDLCRGPHVRSTGQ-VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
            DLCRGPH+++TGQ     FKLM VAGAYWRGDS R ML RIYG A+  + +L ++L  L
Sbjct: 182 QDLCRGPHLQNTGQVPGDAFKLMSVAGAYWRGDSKRQMLQRIYGVAFKNRDDLKKHLNML 241

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTP 297
           EE+ KRDHRKL REMDLFH+ E+  G +FWH  GW I+ TL  YMRRK +   Y+EINTP
Sbjct: 242 EEAAKRDHRKLGREMDLFHMQEEAPGQVFWHPNGWTIYTTLQEYMRRKQRAGGYQEINTP 301

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL-----------RTFALKPMNCPGHVA 346
           QV+D+ LW+ SGHW+ Y+ +MF V+  +    +            R  ALKPMNCP HV 
Sbjct: 302 QVVDRKLWEASGHWEKYQHHMFIVEVDESRDGEHDDATAKNKEQTRINALKPMNCPCHVQ 361

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           VFN GLKSYR+LP+RLAEFGS  R EPSG+LHG+MRVRGFTQDDAH+FCT++Q+  EC +
Sbjct: 362 VFNQGLKSYRDLPLRLAEFGSCARYEPSGALHGIMRVRGFTQDDAHIFCTEDQIEAECAR 421

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
               +  IY++ GF    +K +TRPEKRVG++  WD  EN ++  +     +        
Sbjct: 422 FIEFLADIYRELGFPTFEIKFATRPEKRVGTEESWDYVENALEEAIRKTGRT------YT 475

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
           +  G+GAFYGPK ++ L DAIGR WQCGT QVD NLP R  A Y+  + +K  P M+HRA
Sbjct: 476 LEPGDGAFYGPKLDFYLTDAIGRVWQCGTFQVDPNLPERLGASYIAPNGDKTRPFMLHRA 535

Query: 527 VFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF 586
             GS ERF+GI+IE   G LP WL+P Q +V +ITS A +Y QE+  LL+   +  E D 
Sbjct: 536 TLGSFERFVGILIEEHAGKLPFWLAPRQVVVASITSEADDYVQEVTELLRKAGVRAEADI 595

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           RNE INYK+REHS+ K+P+I+  G +E  ER++ +RR G   T   SL D +  L++ + 
Sbjct: 596 RNEKINYKVREHSVGKVPVILAIGHREVEERTVTVRRLGEKQTSVTSLTDIVSELSRSAT 655

Query: 647 PPD 649
           PPD
Sbjct: 656 PPD 658


>gi|229060032|ref|ZP_04197403.1| Threonyl-tRNA synthetase [Bacillus cereus AH603]
 gi|228719251|gb|EEL70859.1| Threonyl-tRNA synthetase [Bacillus cereus AH603]
          Length = 639

 Score =  658 bits (1698), Expect = 0.0,   Method: Composition-based stats.
 Identities = 282/644 (43%), Positives = 431/644 (66%), Gaps = 17/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEII 62
            I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N +  DL   + E   +EII
Sbjct: 5   MIEIKFPDGSVKEFVKGITLEEIAGSISSSLKKKAVAGKVNDQSFDLRRNIEESAKVEII 64

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +    + + RHS AHI+A+AV+ I+  V++ +GPIIE+GFYYD D     + ++L +I
Sbjct: 65  TMDSDEGVKIARHSAAHILAQAVKRIYGNVKLGVGPIIENGFYYDMDLPSSVNVEDLPKI 124

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M++II  +    +  +S E+ ++LF+   +  K+E+LE+IP  E+VT+Y+QGE+ DL
Sbjct: 125 EKEMKKIINENVKIERVEVSREEVKKLFQEMNDHLKLELLEAIPNDESVTIYKQGEFVDL 184

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ STG +K F     V+GAYWRGDSN  +L RIYG A+++Q+EL ++L+F+EE+ 
Sbjct: 185 CRGPHLPSTGYLKAFQLTH-VSGAYWRGDSNNQVLQRIYGVAFSSQKELEKHLHFVEEAA 243

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KR+HRKL  E++LF  +E+  G+ F+  KG  I   L +++R  + + +Y+E+ TP +++
Sbjct: 244 KRNHRKLGSELELFMFSEEAPGMPFYLPKGQIIRNELEAFLRGIQNEYNYQEVRTPFMMN 303

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           Q LW++SGHW  Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R
Sbjct: 304 QELWEKSGHWGHYKDNMYFSEV------DHKSFALKPMNCPGHMLMFKYKLHSYRELPIR 357

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           + EFG V+R+E SG+L+GL+RVR F QDDAH+F T EQ+ +E   +   I  +YK FGFE
Sbjct: 358 MCEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPEQIEDEIKSVMAQIDYVYKTFGFE 417

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPE  +G D LW  AE  ++ VL ++           +  G+GAFYGPK ++
Sbjct: 418 Y-EVELSTRPEDSMGDDKLWKQAEAALENVLHSLNY------KYRLNEGDGAFYGPKIDF 470

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+ R  QCGTIQ+DF +P +F+  Y++  +EK  PV+IHRAV GS++RF+ I+IE+
Sbjct: 471 HIKDALNRSHQCGTIQLDFQMPEKFDLNYIDEKNEKRRPVVIHRAVLGSLDRFLAILIEH 530

Query: 542 FKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           F G  P W++P+Q  V  ++++  VEYA E+A+ L    + +E D R+E + YKIRE  +
Sbjct: 531 FGGAFPAWVAPVQVKVIPVSNAVHVEYANEVADKLAQAGIRVERDIRDEKLGYKIREAQM 590

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +K+P +++ GDKE    ++ IR++G   ++ V+L   +  + +E
Sbjct: 591 QKVPYVLVIGDKEMESEAVNIRKYGEEKSEVVALDVFVASIEEE 634


>gi|322385772|ref|ZP_08059416.1| threonine--tRNA ligase [Streptococcus cristatus ATCC 51100]
 gi|321270510|gb|EFX53426.1| threonine--tRNA ligase [Streptococcus cristatus ATCC 51100]
          Length = 649

 Score =  658 bits (1698), Expect = 0.0,   Method: Composition-based stats.
 Identities = 261/651 (40%), Positives = 409/651 (62%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  +  +GSIEI+
Sbjct: 1   MIKITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGSIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQ 121
           TP+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D +    S+++L +
Sbjct: 61  TPDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNQAGQISNEDLPR 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWF 180
           IE++M++I+  + P +++ ++ ++ARE+F+   + YK+E++E     E  +T+Y QGE+ 
Sbjct: 121 IEEEMKKIVKENFPSIREEVTKDEAREIFK--NDPYKLELIEEHSEDEGGLTIYCQGEYV 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ RIYGTAW  +++L  YL   EE
Sbjct: 179 DLCRGPHVPSTGRIQIFHLLH-VAGAYWRGNSDNAMMQRIYGTAWFDKKDLKNYLQMREE 237

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           +++RDHRKL +E+DLF I+++   G+ FW   G  I + L  Y+  +++   Y+ + TP 
Sbjct: 238 AKERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVDKELASGYQHVYTPP 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L++ SGHWD Y+ +MF          D   F L+PMNCP H+ V+ H + SYREL
Sbjct: 298 LASVELYKTSGHWDHYQEDMFPTMDMG----DGEEFVLRPMNCPHHIQVYKHHVHSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y+DF
Sbjct: 354 PIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYEDF 413

Query: 419 GFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
              +   +LS R      K   +D +W++A+ +++  LD +       ++     GE AF
Sbjct: 414 NLTEYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAF 467

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K A+G++    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF
Sbjct: 468 YGPKLDIQVKTALGKEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMIHRGVISTMERF 527

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
             I+IEN+KG  P WL+P Q  +  ++    V+YA E+A  L+   +  + D RNE + +
Sbjct: 528 TAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAKKLRDRGVRADVDERNEKMQF 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR     KIP  +I GDKE  + ++ +RR+G   TQ VS+ + +  +  +
Sbjct: 588 KIRASQTSKIPYQLIVGDKEMEDGTVNVRRYGQKETQTVSVDEFVEAILAD 638


>gi|152975545|ref|YP_001375062.1| threonyl-tRNA synthetase [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|152024297|gb|ABS22067.1| threonyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98]
          Length = 640

 Score =  658 bits (1698), Expect = 0.0,   Method: Composition-based stats.
 Identities = 278/648 (42%), Positives = 423/648 (65%), Gaps = 18/648 (2%)

Query: 1   MPSD-IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGS 58
           M    I + FPDGS K +    T  ++A SI  SL KKAVA  +N ++ DL   +  +  
Sbjct: 1   MSEQMISIIFPDGSKKEYRKGITLEEIAASIRSSLKKKAVAGKVNDQLFDLRRKLENDAK 60

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           +EII+ +    + + RH+ AHI+A+AV+ I+  V++ +GP+IE+GFYYD D     + ++
Sbjct: 61  VEIISIDSEEGVNIARHTAAHILAQAVKRIYGNVKLGVGPVIENGFYYDLDLSSSITVED 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
              IEK+M+ II  +    +  +S E A + F+   +  K+E+LE+IP  E +T+Y+QGE
Sbjct: 121 FPIIEKEMKNIIHENLNIERIEISREAAEKFFKEADDHLKLELLEAIPEGEVITMYKQGE 180

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + DLCRGPH+ STG +K F     V+GAYWRGDSN  +L R+YG A+++Q+EL +YL+F+
Sbjct: 181 FVDLCRGPHLPSTGYLKAFQLTH-VSGAYWRGDSNNQVLQRVYGVAFSSQKELKKYLHFV 239

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTP 297
           EE+ KR+HRKL  E++LF  +E+  G+ F+  KG  I   L  ++R  +   DY+E+ TP
Sbjct: 240 EEAAKRNHRKLGNELELFMFSEEAPGMPFYLPKGQIIRNELEGFLREIQQAYDYQEVRTP 299

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +++Q LW++SGHWD Y+ NM+  +       D ++FALKPMNCPGH+ +F H L+SYR+
Sbjct: 300 LMMNQELWEKSGHWDHYKDNMYFSEV------DHKSFALKPMNCPGHMLIFKHKLRSYRD 353

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+ EFG V+R+E SG+L+GL+RVR F QDDAH++ T EQ+ +E   +   I  +Y+ 
Sbjct: 354 LPIRMCEFGQVHRHEFSGALNGLLRVRTFCQDDAHIYVTAEQIESEIQSVLKQIDYVYRT 413

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFE  + +LSTRPE  +G D LW+ AE  ++ VL +++       N  +  G+GAFYGP
Sbjct: 414 FGFEYEI-ELSTRPENSMGDDELWNQAEAALENVLKSLQY------NYRINEGDGAFYGP 466

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K ++ +KDA+ R  QCGT+Q+DF +P +F+  Y++  +EK  PV+IHRAV GS +RF+ I
Sbjct: 467 KIDFHIKDALKRSHQCGTVQLDFQMPEKFDLHYIDEKNEKRRPVVIHRAVLGSFDRFLAI 526

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVE-YAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +IE+F G  P WL+PIQ  V  +++   + Y +EI +  K   + +E D RNE + YKIR
Sbjct: 527 LIEHFGGAFPAWLAPIQVKVIPVSNLVHDSYTKEIEDKFKQVDIRVERDIRNEKLGYKIR 586

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  I+KIP +++ GDKE    S+ +R++G   ++ VSL + I  L  E
Sbjct: 587 DAQIQKIPYVLVIGDKEMENASVNVRKYGEENSEVVSLHEFIENLQIE 634


>gi|327402300|ref|YP_004343138.1| Ser-tRNA(Thr) hydrolase [Fluviicola taffensis DSM 16823]
 gi|327317808|gb|AEA42300.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Fluviicola
           taffensis DSM 16823]
          Length = 647

 Score =  658 bits (1698), Expect = 0.0,   Method: Composition-based stats.
 Identities = 260/655 (39%), Positives = 412/655 (62%), Gaps = 20/655 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +T PDGS++ +   AT  DVA SIS  LA+  +A  +N  V D + P+  + +++++
Sbjct: 1   MINITLPDGSVRQYEAGATALDVALSISEGLARNVLAAKVNNVVIDANIPLTNDCTLQLL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
           T  D    + + HS AH+MAEA++  +P +++AIGP I +G+YYD D  +QPF  ++L +
Sbjct: 61  TWNDSEGKSTMWHSSAHLMAEALEFYYPGIKLAIGPPIANGYYYDVDFMDQPFKEEDLEK 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE+KM+E+    +P++++ +S   A   F  K++ YK+E+++ +P   ++T Y QG + D
Sbjct: 121 IEQKMKELAKLKNPYVRKEVSKADALAYFTEKEDPYKLELIQDLP-DGSITFYTQGNFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+  TG +K   KLM +AGAYWRGD     L+R+YG  +  Q ELT+YL  +EE+
Sbjct: 180 LCRGPHIPDTGFIK-AVKLMSIAGAYWRGDEKNKQLTRVYGITFPKQAELTEYLERVEEA 238

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           ++RDHRK+ +E++LF  ++    G+  W  KG  + + L +++++ + K  YE++ TP +
Sbjct: 239 KRRDHRKVGKELELFTFSQKVGQGLPLWLPKGAALRERLENFLKKAQRKAGYEQVITPHI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            ++ L+  SGH++ Y A+ F    A  T      F LKPMNCP H  ++    +SY++LP
Sbjct: 299 GNKELYVTSGHYEKYGADSFQ---AIKTPDPDEEFLLKPMNCPHHCEIYKSKPRSYKDLP 355

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
            R AEFG+VYR E SG LHGL RVRGFTQDDAH+FCT++Q+  E  K+ +L++ I+K   
Sbjct: 356 ARFAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCTQDQVKEEFKKVIDLVLYIFKTLD 415

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           F+    ++S R  +     +GSD  W+      K     I+ +++  + T V LGE AFY
Sbjct: 416 FQNFKAQISLRDPENPSKYIGSDENWE------KAESAIIEAAAEKNLPTVVELGEAAFY 469

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +++++DA+GR+WQ GTIQVD+NLP RF   Y  + ++K  PVMIHRA FGS+ERF+
Sbjct: 470 GPKLDFMVQDALGREWQLGTIQVDYNLPERFELEYTGADNQKHRPVMIHRAPFGSMERFV 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            +++E+  G+ PLWL+  Q  +  I+    EYA+++  LL +  +    D RNE I  KI
Sbjct: 530 AVLLEHCGGDFPLWLATDQVAILPISDKYNEYAKDVLELLNNSDIRGFVDDRNEKIGKKI 589

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDC 650
           RE  +KKIP +++ G+KEA E+ + +R+ G      +S+ DA   +  +++  + 
Sbjct: 590 REAELKKIPFMLVVGEKEAEEKQVSVRQRGEGDKGSMSI-DAFAAIVNQAIEKEL 643


>gi|262052254|ref|ZP_06024459.1| threonyl-tRNA synthetase 1 [Staphylococcus aureus 930918-3]
 gi|259159855|gb|EEW44894.1| threonyl-tRNA synthetase 1 [Staphylococcus aureus 930918-3]
          Length = 645

 Score =  658 bits (1697), Expect = 0.0,   Method: Composition-based stats.
 Identities = 268/650 (41%), Positives = 403/650 (62%), Gaps = 21/650 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
             I + FPDG+ K F    T  D+A+SIS  L KKAVA   NG++ DL+ P+  +GSIEI
Sbjct: 2   EQINIQFPDGNKKAFDKGTTTEDIAQSISPGLRKKAVAGKFNGQLVDLTKPLETDGSIEI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +TP    +L V+RHS AH+MA A++ ++  V+  +GP+IE GFYYDFD +Q  SSD+  Q
Sbjct: 62  VTPGSEEALEVLRHSTAHLMAHAIKRLYGNVKFGVGPVIEGGFYYDFDIDQNISSDDFEQ 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK M++I+  +    ++ +S ++A+EL     + YK+E++++IP  ENVTLY QG++ D
Sbjct: 122 IEKTMKQIVNENMKIERKVVSRDEAKEL--FSNDEYKLELIDAIPEDENVTLYSQGDFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG HV ST ++K+F KL+  AGAYWRGDSN  ML RIYGTA+  ++EL  +L  LEE 
Sbjct: 180 LCRGVHVPSTAKIKEF-KLLSTAGAYWRGDSNNKMLQRIYGTAFFDKKELKAHLQMLEER 238

Query: 242 EKRDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRK+ +E++LF +    G+G+  W   G  I + +  Y+  +++   Y+ + TP +
Sbjct: 239 KERDHRKIGKELELFTNSQLVGAGLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVL 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +  L++ SGHWD Y+ +MF     D+T     +  L+PMNCP H+ ++ +   SYRELP
Sbjct: 299 ANVDLYKTSGHWDRYQEDMFPPMQLDET----ESMVLRPMNCPHHMMIYANKPHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G+++R E SG++ GL RVRG T +D+H+F   +Q+  E  ++ N+II +YKDFG
Sbjct: 355 IRIAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVNMIIDVYKDFG 414

Query: 420 FEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           FE    +LS R      K    D +W+ AEN++K   D +  S ++ I      GE AFY
Sbjct: 415 FEDYSFRLSYRDPEDKEKYFDDDDMWNKAENMLKEAADELGLSYEEAI------GEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G++    T Q+DF LP RF+  Y+    E   PV+IHR V  ++ERF+
Sbjct: 469 GPKLDVQVKTAMGKEETLSTAQLDFLLPERFDLTYIGQDGEHHRPVVIHRGVVSTMERFV 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             + E  KG  P WL+P Q  +  +      +YA+++ + LKS  + +  D RNE + YK
Sbjct: 529 AFLTEETKGAFPTWLAPKQVQIIPVNVDLHYDYARQLQDELKSQGVRVSIDDRNEKMGYK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IRE  ++KIP  I+ GDKE     + +R++GS   + V   + I  L  E
Sbjct: 589 IREAQMQKIPYQIVVGDKEVENNQVNVRQYGSQDQETVEKDEFIWNLVDE 638


>gi|228999356|ref|ZP_04158935.1| Threonyl-tRNA synthetase [Bacillus mycoides Rock3-17]
 gi|229006911|ref|ZP_04164541.1| Threonyl-tRNA synthetase [Bacillus mycoides Rock1-4]
 gi|228754311|gb|EEM03726.1| Threonyl-tRNA synthetase [Bacillus mycoides Rock1-4]
 gi|228760301|gb|EEM09268.1| Threonyl-tRNA synthetase [Bacillus mycoides Rock3-17]
          Length = 643

 Score =  658 bits (1697), Expect = 0.0,   Method: Composition-based stats.
 Identities = 249/652 (38%), Positives = 402/652 (61%), Gaps = 20/652 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           M   +K+TFPDG++K FP   T  ++A SIS  L KKAVA  +N ++ DL  P+  +G++
Sbjct: 1   MADVVKITFPDGAVKEFPKGTTTEEIAASISPGLKKKAVAGKLNDEMIDLRTPIEEDGAV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +    L ++RHS AH++A+A++ ++ +V++ IGP+IE+GFYYD D E+  + ++ 
Sbjct: 61  SIITLDSEDGLYILRHSTAHLLAQALKRLYKDVKLGIGPVIENGFYYDIDMEEAITVEDF 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IEK+MQ+I+  +   ++  +   +A   +E   +  K+E++  +P    +++Y QGE+
Sbjct: 121 PKIEKEMQKIVNENLEIVRHEVPRAEALRRYEEIGDELKLELINDLPEDAVISIYEQGEF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           +DLCRG H+ STG++K F KL+ VAGAYWRGDSN  ML RIYGTA+  + EL ++L  LE
Sbjct: 181 YDLCRGVHLPSTGKIKMF-KLLSVAGAYWRGDSNNKMLQRIYGTAFVKKAELDEHLRMLE 239

Query: 240 ESEKRDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTP 297
           E+++RDHRKL +E+ LF +  + G G+  W  KG  I + +  Y+  ++    Y+ + TP
Sbjct: 240 EAKERDHRKLGKELKLFTNSQKVGQGLPLWLPKGATIRRIIERYIVDKEASLGYDHVYTP 299

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +  + L++ SGHW+ YR  MF     D+         L+PMNCP H+ V+ + + SYRE
Sbjct: 300 VLGSRELYETSGHWNHYRDGMFPSMEMDN-----EELVLRPMNCPHHMMVYKNDIHSYRE 354

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+  E  ++ NL + +YKD
Sbjct: 355 LPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVYKD 414

Query: 418 FGFEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           FG E    +LS R      K    D +W+ A++++K  +D +       +      GE A
Sbjct: 415 FGLENYSFRLSYRDPEDTKKYYADDEMWEKAQSMLKEAMDEMG------LEYYEAEGEAA 468

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  ++ A+G+D    T+Q+DF LP RF   YV    +   PV+IHR V  ++ER
Sbjct: 469 FYGPKLDVQVRTALGKDETLSTVQLDFLLPERFELTYVGEDGKPHRPVVIHRGVVSTMER 528

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETIN 592
           F+  +IE +KG  P WL+P+Q  V  ++    ++YA+++   L+   + +E D R E I 
Sbjct: 529 FVAFLIEEYKGAFPTWLAPVQVQVIPVSPQVHLDYAKKVQEDLQRAGIRVEVDTREEKIG 588

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           YKIRE  ++KIP +++ GD E +E  + +R++G   ++ ++L   + ++  E
Sbjct: 589 YKIREAQMQKIPYMLVVGDNEVAENGVNVRKYGEQKSETIALDAFVDMIKVE 640


>gi|320547252|ref|ZP_08041545.1| threonine--tRNA ligase [Streptococcus equinus ATCC 9812]
 gi|320448140|gb|EFW88890.1| threonine--tRNA ligase [Streptococcus equinus ATCC 9812]
          Length = 697

 Score =  658 bits (1697), Expect = 0.0,   Method: Composition-based stats.
 Identities = 268/662 (40%), Positives = 416/662 (62%), Gaps = 26/662 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
           S +K+TFPDG+++ F    T  ++A+SIS SLAKKA+A   NG++ D +  +  +GSIE+
Sbjct: 49  SMVKITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGELIDTTREITEDGSIEV 108

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELA 120
           +TP+   +L+V+RHS AH+ A+A + ++P++ + +GP IE+GFYYD D +    + ++L 
Sbjct: 109 VTPDHEDALSVLRHSAAHLFAQAAKRLFPDLCLGVGPAIENGFYYDTDNKSGQITDEDLP 168

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEW 179
           +IE++M++I+  + P +++ +S E+ARELF+   + YK+E++E     E  +T+Y QGE+
Sbjct: 169 RIEEEMKKIVKENLPCVRKEISIEEARELFK--NDPYKLELIEEHGEDEGGLTVYTQGEF 226

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ R+YGTAW  +++L  YL   +
Sbjct: 227 TDLCRGPHVPSTGRIQVFHLL-NVAGAYWRGNSDNAMMQRVYGTAWFDKKDLKAYLKQRQ 285

Query: 240 ESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTP 297
           E+++RDHRKL +E+DLF I+++   G+ FW   G  I +TL  Y+  +++   Y  + TP
Sbjct: 286 EAKERDHRKLGKELDLFMISQEVGQGLPFWLPDGATIRRTLERYIVDKEVASGYLHVYTP 345

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    L++ SGHWD YR +MF          D   F L+PMNCP H+ V+ H + SYRE
Sbjct: 346 PLASVDLYKTSGHWDHYREDMFPTMDMG----DGEEFVLRPMNCPHHIQVYKHHVHSYRE 401

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+ +E  K   LII +Y+D
Sbjct: 402 LPIRIAEIGMMHRYEKSGALSGLQRVREMSLNDGHLFVTPEQIQDEFQKALQLIIDVYED 461

Query: 418 FGFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           F       +LS R      K    D +W++A++++K  LD +       ++     GE A
Sbjct: 462 FNLTDYRFRLSLRDPKDTHKYYDDDEMWENAQSMLKAALDEMG------VDYFEAEGEAA 515

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  +K A+G +    TIQ+DF LP RF   YV +  E+  PVMIHR V  ++ER
Sbjct: 516 FYGPKLDIQVKTALGNEETLSTIQLDFLLPERFGLTYVGADGEEHRPVMIHRGVISTMER 575

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETIN 592
           F  I+IEN+KG  P WL+P Q  V  +++   V+YA E+A LL+   + ++ D RNE + 
Sbjct: 576 FTAILIENYKGAFPTWLAPHQVTVIPVSNEAHVDYAWEVAKLLRDKGVRVDVDERNEKMQ 635

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE---SLPPD 649
            KIR+   KKIP  +I GDKE +++++ +RR+GS  T   S+ + +  +  +      PD
Sbjct: 636 LKIRQSQTKKIPYQLIVGDKEMADKTVNVRRYGSKQTHTESIDEFVENIMADIDRKSRPD 695

Query: 650 CQ 651
            +
Sbjct: 696 AE 697


>gi|322374759|ref|ZP_08049273.1| threonine--tRNA ligase [Streptococcus sp. C300]
 gi|321280259|gb|EFX57298.1| threonine--tRNA ligase [Streptococcus sp. C300]
          Length = 647

 Score =  658 bits (1697), Expect = 0.0,   Method: Composition-based stats.
 Identities = 262/651 (40%), Positives = 408/651 (62%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  +  +GSIEI+
Sbjct: 1   MIKITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGSIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQ 121
           TP+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D +    S+++L +
Sbjct: 61  TPDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNQAGQISNEDLPR 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWF 180
           IE++M++I+  + P +++ ++ ++ARE+F+   + YK+E++E     E  +T+YRQGE+ 
Sbjct: 121 IEEEMKKIVKENFPSIREEVTKDEAREIFK--NDPYKLELIEEHSEDEGGLTIYRQGEYV 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ RIYGTAW  +++L  YL   EE
Sbjct: 179 DLCRGPHVPSTGRIQIFHLLH-VAGAYWRGNSDNAMMQRIYGTAWFDKKDLKNYLQMREE 237

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           +++RDHRKL +E+DLF I+++   G+ FW   G  I + L  Y+  +++   Y+ + TP 
Sbjct: 238 AKERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVDKELASGYQHVYTPP 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L++ SGHWD Y+ +MF          D   F L+PMNCP H+ VF H + SYREL
Sbjct: 298 LASVELYKTSGHWDHYQEDMFPTMDMG----DGEEFVLRPMNCPHHIQVFKHHVHSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y+DF
Sbjct: 354 PIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYEDF 413

Query: 419 GFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
              +   +LS R      K   +D +W++A+ +++  LD +       ++     GE AF
Sbjct: 414 NLTEYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAF 467

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K A+G++    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF
Sbjct: 468 YGPKLDIQVKTALGKEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMIHRGVISTMERF 527

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
             I+IEN+KG  P WL+P Q  +  ++    V+YA E+A  L+   +  + D RNE + +
Sbjct: 528 TAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAKKLRDRGVRADVDERNEKMQF 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR     KIP  +I GDKE  + ++ +RR+G   TQ V +   +  +  +
Sbjct: 588 KIRASQTSKIPYQLIVGDKEMEDGTVNVRRYGQKETQTVPVDKFVAAILAD 638


>gi|228478293|ref|ZP_04062901.1| threonyl-tRNA synthetase [Streptococcus salivarius SK126]
 gi|228249972|gb|EEK09242.1| threonyl-tRNA synthetase [Streptococcus salivarius SK126]
          Length = 648

 Score =  658 bits (1697), Expect = 0.0,   Method: Composition-based stats.
 Identities = 266/661 (40%), Positives = 413/661 (62%), Gaps = 26/661 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +TFPDG+++ F    T  D+A+SIS SLAKKA+A   NGK+ D +  +  +GSIEI+
Sbjct: 1   MINITFPDGAVREFESGVTTFDIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGSIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQ 121
           TP+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D E    S+++L +
Sbjct: 61  TPDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNEAGQISNEDLPR 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWF 180
           IE++M++I+  + P +++ ++ ++ARE+F+   + YK+E++E     E  +T+YRQGE+ 
Sbjct: 121 IEEEMKKIVKENFPSIREEVTKDEAREIFK--NDPYKLELIEEHSEDEGGLTIYRQGEYV 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ RIYGTAW  +++L  YL  LEE
Sbjct: 179 DLCRGPHVPSTGRIQVFHLL-NVAGAYWRGNSDNAMMQRIYGTAWFDKKDLKAYLKRLEE 237

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           +++RDHRKL +E+DLF I+++   G+ FW   G  I + L  Y+  +++   Y+ + TP 
Sbjct: 238 AKERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRVLERYIVDKEVAAGYQHVYTPP 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L++ SGHWD YR +MF          D   F L+PMNCP H+ V+ H + SYREL
Sbjct: 298 IASVELYKTSGHWDHYREDMFPTMDMG----DGEAFVLRPMNCPHHIEVYKHHVHSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  + +D H F T EQ+ +E  +   LII +Y+DF
Sbjct: 354 PIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHTFVTPEQIKDEFQRTLQLIIDVYEDF 413

Query: 419 GFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
                  +LS R      K   +D +W++A++++K  +D ++      ++     GE AF
Sbjct: 414 NLTDYRFRLSYRDPKDTHKYFDNDEMWENAQSMLKSAMDDME------LDYFEAEGEAAF 467

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K A+G +    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF
Sbjct: 468 YGPKLDIQVKTALGNEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMIHRGVISTMERF 527

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINY 593
             I+IEN+KG  P WL+P Q  V  +++    +YA E+A  L+   + +E D RNE + Y
Sbjct: 528 TAILIENYKGAFPTWLAPQQVTVIPVSNEAHTDYAWEVAKQLRDRGIRVEVDERNEKMQY 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE---SLPPDC 650
           KIR    +KIP  +I GDKE  + ++ +RR+G   T   ++ + +  +  +      PD 
Sbjct: 588 KIRASQTQKIPYQLIVGDKEMEDGTVNVRRYGQKQTHTEAVSEFVENILADIARKSRPDA 647

Query: 651 Q 651
           +
Sbjct: 648 E 648


>gi|315648987|ref|ZP_07902081.1| threonyl-tRNA synthetase [Paenibacillus vortex V453]
 gi|315275668|gb|EFU39022.1| threonyl-tRNA synthetase [Paenibacillus vortex V453]
          Length = 645

 Score =  658 bits (1696), Expect = 0.0,   Method: Composition-based stats.
 Identities = 260/649 (40%), Positives = 410/649 (63%), Gaps = 21/649 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           I +  PDGS++ +   ++  DVA SIS  L K AVA  ++G V DLS P+++G+ IEI+T
Sbjct: 3   INIKLPDGSVREYEAGSSIEDVAASISSGLRKNAVAGKLDGIVVDLSTPLQDGALIEIVT 62

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWP--EVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
            + P  L V+RHS AH++A+A + ++   EV++ +GP+IEDGFYYD D E+P + ++L +
Sbjct: 63  QDTPEGLEVMRHSTAHLLAQATKRLYGAKEVKLGVGPVIEDGFYYDMDLEEPLNPEDLQK 122

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK+M+ II  + P +++ +S  +A  +F    + YK+E++ ++P    +T+Y QGE+FD
Sbjct: 123 IEKEMERIIGENLPIVRKEVSRAEALRVFGELGDPYKLELINALPEDSVITIYEQGEFFD 182

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG++K F KLM VAGAYWRGDS   ML R+YGTA+  + +L ++L+ LEE+
Sbjct: 183 LCRGPHVPSTGKIKVF-KLMNVAGAYWRGDSKNKMLQRVYGTAFVKKAQLDEHLHLLEEA 241

Query: 242 EKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQV 299
           +KRDHRKL +E+ +F  ++  G G+  W   G K+ +TL  Y+    +   Y+ + TP +
Sbjct: 242 KKRDHRKLGKELQMFTFSQLVGQGLPIWLPNGAKLRRTLERYIVDMEERLGYQHVYTPVL 301

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +  L++ SGHW+ Y+ +MF     D+         L+PMNCP H+ V+   + SYR+LP
Sbjct: 302 GNVELYKTSGHWEHYQEDMFPKMEMDN-----EELVLRPMNCPHHMMVYKSDMHSYRDLP 356

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G  +R E SG+L GL RVR  T +D+H+FC  +Q+  E  ++  LI+++YKDFG
Sbjct: 357 IRIAELGMQHRYEMSGALTGLHRVRAMTLNDSHIFCRPDQIKEEFARVIQLIMTVYKDFG 416

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R  +       +D +W+ ++ +++ V++++     +        GE AFY
Sbjct: 417 IHDYRFRLSYRDPQDTEKYFQNDEMWEMSQRMLREVVESLDMPFYE------AEGEAAFY 470

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  ++ A+G++    T+Q+DF LP RF   YV    +K  PV+IHR + G++ERF 
Sbjct: 471 GPKLDVQIRTALGKEETLSTVQLDFLLPERFELEYVGDDGQKHRPVVIHRGILGTMERFT 530

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
             ++ENF G LPLWLSP+Q  V  ++++  +YA+E+A  L+   +S+E D RNE + YKI
Sbjct: 531 AFLLENFAGALPLWLSPVQVKVIPVSNAFEDYAKEVAEKLQFAGISVEPDLRNEKLGYKI 590

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           RE  ++KIP + I G+ E +  ++ +R+ G       SL D I  L +E
Sbjct: 591 REAQLEKIPYMFIVGENEKNAGAVSVRKRGEGDIGAQSLDDIILKLREE 639


>gi|254374591|ref|ZP_04990072.1| threonyl-tRNA synthetase [Francisella novicida GA99-3548]
 gi|151572310|gb|EDN37964.1| threonyl-tRNA synthetase [Francisella novicida GA99-3548]
          Length = 634

 Score =  658 bits (1696), Expect = 0.0,   Method: Composition-based stats.
 Identities = 301/643 (46%), Positives = 426/643 (66%), Gaps = 16/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            I + FPDGSI+ F       DVA+SIS SLAK  VA  I+ ++ D  D +     + +I
Sbjct: 1   MINIRFPDGSIREFEAGVNSLDVAKSISPSLAKATVAAYIDDQLKDAKDAINSNCELRLI 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +DP  L ++RHSCAH++A AV+ ++P  +V IGP++++GFYYDF  ++     +L  I
Sbjct: 61  TVKDPEGLEILRHSCAHLLAHAVKELYPNTEVTIGPVVDNGFYYDFSFKESIGEADLPTI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EKKM+E+  + +P   + +   +A E F+++ E YKVEI++SI A E V +Y Q  + DL
Sbjct: 121 EKKMKELAKKSAPVSYRVVPKAEAIEFFKAQGENYKVEIIDSI-ADEQVKIYTQDNFSDL 179

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ +T  +K F KL K+AGAYWRG+S+  ML+RIYGT W T+++L QYL  LEE+E
Sbjct: 180 CRGPHIPNTSVLKAF-KLTKLAGAYWRGNSDNEMLTRIYGTCWATKEDLEQYLNMLEEAE 238

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KRDHRK+ + +DLFH  ED  G+ FWH  G +I++ +  YMR    K    EI TP + D
Sbjct: 239 KRDHRKIGKVLDLFHFQEDSPGIAFWHDNGVRIWRQVEDYMRASNNKYGCSEIRTPLIAD 298

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             LWQ+SGH   Y  NMFA K       + R FA++PMNCP  V V+N  L SYR+LP+R
Sbjct: 299 FSLWQKSGHASKYAENMFATK------SENRDFAIRPMNCPTCVQVYNTKLHSYRDLPIR 352

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AEFG V+RNEPSGSLHGL+RVR FTQDD H+FCT EQ+  E + +      +YKDFGF 
Sbjct: 353 IAEFGIVHRNEPSGSLHGLLRVRSFTQDDGHIFCTPEQVEEEVILMVQQCFEVYKDFGFN 412

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              VK++ RPE R+G D  WD +E ++K  LD       + ++  +L GEGAFYGPK E+
Sbjct: 413 DFAVKIALRPENRIGDDETWDKSEQMLKNALDA------NNVSYELLPGEGAFYGPKIEF 466

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            LKDAIGR WQCGTIQ+DF++P R  A Y++ + EK  PVM+HRA+ GS+ERFIG++IE+
Sbjct: 467 HLKDAIGRSWQCGTIQLDFSMPQRLGATYIDKNGEKQVPVMLHRAIVGSLERFIGMLIEH 526

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + GNLPLWL+P+Q  V  I+++  +Y +E+  +L+ + +  + D RNE I +KIREH++ 
Sbjct: 527 YAGNLPLWLAPVQVAVMGISNNQDDYCKEVFTMLEKNGIRAKLDLRNEKIGFKIREHTLL 586

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           ++P ++I G  E  ++ I IR+       ++S+ D    L K+
Sbjct: 587 RVPYLVILGKNEQEQKIITIRKHSGEDLGQMSVYDFCAFLDKQ 629


>gi|15674621|ref|NP_268795.1| threonyl-tRNA synthetase [Streptococcus pyogenes M1 GAS]
 gi|71910240|ref|YP_281790.1| threonyl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
 gi|22654136|sp|Q9A115|SYT_STRP1 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|13621733|gb|AAK33516.1| putative threonyl-tRNA synthetase 1 [Streptococcus pyogenes M1 GAS]
 gi|71853022|gb|AAZ51045.1| threonyl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
          Length = 647

 Score =  658 bits (1696), Expect = 0.0,   Method: Composition-based stats.
 Identities = 272/660 (41%), Positives = 410/660 (62%), Gaps = 26/660 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            IK+TFPDG+++ F    T  D+AESIS+SLAKKA+A   N ++ D +  +  +GSIEI+
Sbjct: 1   MIKITFPDGAVREFESGVTTFDIAESISKSLAKKALAGKFNDQLIDTTRAIEEDGSIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQ 121
           TP+   +  V+RHS AH+ A+A + ++P + + +GP I +GFYYD D  E   S+++L +
Sbjct: 61  TPDHKDAYEVLRHSAAHLFAQAAKRLFPNLHLGVGPAIAEGFYYDTDNAEGQISNEDLPR 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE +MQ+I+  + P +++ ++ E+A ELF+   + YKVE++    A   +T+YRQGE+ D
Sbjct: 121 IEAEMQKIVTENYPCIREEVTKEEALELFK--DDPYKVELINE-HAGAGLTVYRQGEFVD 177

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ RIYGTAW  +++L  YL  LEE+
Sbjct: 178 LCRGPHVPSTGRIQVFHLL-NVAGAYWRGNSDNNMMQRIYGTAWFDKKDLKAYLTRLEEA 236

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+++   G+ FW   G  I +TL  Y+  +++   Y+ + TP +
Sbjct: 237 KERDHRKLGKELDLFMISQEVGQGLPFWLPDGATIRRTLERYITDKELASGYQHVYTPPL 296

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHWD Y+ +MF V        D   F L+PMNCP H+ V+ + ++SYRELP
Sbjct: 297 ASVELYKTSGHWDHYQEDMFPVMDMG----DGEEFVLRPMNCPHHIQVYKNHVRSYRELP 352

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  T +D H+F T EQ+  E  +   LII +Y DF 
Sbjct: 353 IRIAELGMMHRYEKSGALSGLQRVREMTLNDGHIFVTPEQIQEEFQRALQLIIDVYADFN 412

Query: 420 FEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R      K   +D +W++A++++K  LD +       ++     GE AFY
Sbjct: 413 LTDYRFRLSYRDPNDTHKYYDNDEMWENAQSMLKAALDEMG------VDYFEAEGEAAFY 466

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G +    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF 
Sbjct: 467 GPKLDIQVKTALGNEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMIHRGVISTMERFT 526

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IE +KG  P WL+P Q  V  I++   ++YA E+A  L+   +  + D RNE + YK
Sbjct: 527 AILIETYKGAFPTWLAPHQVTVIPISNEAHIDYAWEVAKTLRDRGVRADVDDRNEKMQYK 586

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE---SLPPDCQ 651
           IR     KIP  +I GDKE  ++S+ +RR+GS TT   S+ + +  +  +      PD Q
Sbjct: 587 IRASQTSKIPYQLIVGDKEMEDKSVNVRRYGSKTTHTESVEEFVENILADIARKSRPDAQ 646


>gi|293364941|ref|ZP_06611658.1| threonine--tRNA ligase [Streptococcus oralis ATCC 35037]
 gi|307703194|ref|ZP_07640140.1| threonyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
 gi|291316391|gb|EFE56827.1| threonine--tRNA ligase [Streptococcus oralis ATCC 35037]
 gi|307623269|gb|EFO02260.1| threonyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
          Length = 647

 Score =  658 bits (1696), Expect = 0.0,   Method: Composition-based stats.
 Identities = 262/651 (40%), Positives = 408/651 (62%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  +  +G+IEI+
Sbjct: 1   MIKITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGAIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQ 121
           TP+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D      S+++L +
Sbjct: 61  TPDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNTAGQISNEDLPR 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWF 180
           IE++MQ+I+  + P +++ ++ ++ARE+F+   + YK+E++E     E  +T+Y QGE+ 
Sbjct: 121 IEEEMQKIVKENFPSIREEVTKDEAREIFK--NDPYKLELIEEHSEDEGGLTIYHQGEYV 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ STG+++ F  L  VAGAYWRG+S+  M+ RIYGTAW  +++L  YL   EE
Sbjct: 179 DLCRGPHIPSTGRIQIFHLLH-VAGAYWRGNSDNAMMQRIYGTAWFDKKDLKNYLQMREE 237

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           +++RDHRKL +E+DLF I+++   G+ FW   G  I + L  Y+  +++   Y+ + TP 
Sbjct: 238 AKERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVDKELASGYQHVYTPP 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L++ SGHWD Y+ +MF          D   F L+PMNCP H+ VF H + SYREL
Sbjct: 298 LASVELYKTSGHWDHYQEDMFPTMDMG----DGEEFVLRPMNCPHHIQVFKHHVHSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y+DF
Sbjct: 354 PIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYEDF 413

Query: 419 GFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
              +   +LS R      K   +D +W++A+ +++  LD +       ++     GE AF
Sbjct: 414 NLTEYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAF 467

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K A+G++    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF
Sbjct: 468 YGPKLDIQVKTALGKEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMIHRGVISTMERF 527

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
             I+IEN+KG  P WL+P Q  +  ++    V+YA E+A  L+   +  + D RNE + +
Sbjct: 528 TAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAKKLRDRGVRADVDERNEKMQF 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR     KIP  +I GDKE  + ++ +RR+G   TQ VS+ D +  +  +
Sbjct: 588 KIRASQTSKIPYQLIVGDKEMEDGTVNVRRYGQKETQTVSVDDFVQAILAD 638


>gi|298694953|gb|ADI98175.1| threonyl-tRNA synthetase 1 [Staphylococcus aureus subsp. aureus
           ED133]
 gi|323440773|gb|EGA98482.1| threonyl-tRNA synthetase [Staphylococcus aureus O11]
 gi|323442928|gb|EGB00551.1| threonyl-tRNA synthetase [Staphylococcus aureus O46]
          Length = 645

 Score =  657 bits (1695), Expect = 0.0,   Method: Composition-based stats.
 Identities = 268/650 (41%), Positives = 403/650 (62%), Gaps = 21/650 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
             I + FPDG+ K F    T  D+A+SIS  L KKAVA   NG++ DL+ P+  +GSIEI
Sbjct: 2   EQINIQFPDGNKKAFDKGTTTEDIAQSISPGLRKKAVAGKFNGQLVDLTKPLETDGSIEI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +TP    +L V+RHS AH+MA A++ ++  V+  +GP+IE GFYYDFD +Q  SSD+  Q
Sbjct: 62  VTPGSEEALEVLRHSTAHLMAHAIKRLYGNVKFGVGPVIEGGFYYDFDIDQNISSDDFEQ 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK M++I+  +    ++ +S ++A+EL     + YK+E++++IP  ENVTLY QG++ D
Sbjct: 122 IEKTMKQIVNENMKIERKVVSRDEAKEL--FSNDEYKLELIDAIPEDENVTLYSQGDFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG HV ST ++K+F KL+  AGAYWRGDSN  ML RIYGTA+  ++EL  +L  LEE 
Sbjct: 180 LCRGVHVPSTAKIKEF-KLLSTAGAYWRGDSNNKMLQRIYGTAFFDKKELKAHLQMLEER 238

Query: 242 EKRDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRK+ +E++LF +    G+G+  W   G  I + +  Y+  +++   Y+ + TP +
Sbjct: 239 KERDHRKIGKELELFTNSQLVGAGLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVL 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +  L++ SGHWD Y+ +MF     D+T     +  L+PMNCP H+ ++ +   SYRELP
Sbjct: 299 ANVDLYKTSGHWDHYQEDMFPPMQLDET----ESMVLRPMNCPHHMMIYANKPHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G+++R E SG++ GL RVRG T +D+H+F   +Q+  E  ++ N+II +YKDFG
Sbjct: 355 IRIAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVNMIIDVYKDFG 414

Query: 420 FEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           FE    +LS R      K    D +W+ AEN++K   D +  S ++ I      GE AFY
Sbjct: 415 FEDYSFRLSYRDPEDKEKYFDDDDMWNKAENMLKEAADELGLSYEEAI------GEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G++    T Q+DF LP RF+  Y+    E   PV+IHR V  ++ERF+
Sbjct: 469 GPKLDVQVKTAMGKEETLSTAQLDFLLPERFDLTYIGQDGEHHRPVVIHRGVVSTMERFV 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             + E  KG  P WL+P Q  +  +      +YA+++ + LKS  + +  D RNE + YK
Sbjct: 529 AFLTEETKGAFPTWLAPKQVQIIPVNVDLHYDYARQLQDELKSQGVRVSIDERNEKMGYK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IRE  ++KIP  I+ GDKE     + +R++GS   + V   + I  L  E
Sbjct: 589 IREAQMQKIPYQIVVGDKEVENNQVNVRQYGSQDQETVEKDEFIWNLVDE 638


>gi|302035784|ref|YP_003796106.1| threonyl-tRNA synthetase [Candidatus Nitrospira defluvii]
 gi|300603848|emb|CBK40180.1| Threonyl-tRNA synthetase [Candidatus Nitrospira defluvii]
          Length = 651

 Score =  657 bits (1695), Expect = 0.0,   Method: Composition-based stats.
 Identities = 277/649 (42%), Positives = 392/649 (60%), Gaps = 16/649 (2%)

Query: 1   MPSD-IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGS 58
           M S  I++T PDG+ K  P   T  +        L  K +A  ING+  DLS P+  + +
Sbjct: 1   MASQLIQITLPDGTRKQVPAGCTVREALTPEGGRLDAKVLAAKINGEPMDLSRPLEQDAT 60

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           IE +T E P    V RHS  HIMA+AV+ ++P  Q+ IGP ++DGFYYDF  ++PF+ ++
Sbjct: 61  IEALTFESPEGREVYRHSSTHIMAQAVKEVFPTAQLTIGPALDDGFYYDFAFDRPFTPED 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L +IE +  EI+ R     +  LS + A + F+ + E YKVE++ S      ++LYRQGE
Sbjct: 121 LEKIEARAIEIMKRGLTVTRSELSKQDAIKFFQERGEGYKVELINSFDDASPISLYRQGE 180

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + DLCRGPH+ +TG V  F KL+   GAYWRGD   PML R+YGT++ T++EL  +L  L
Sbjct: 181 FVDLCRGPHLPTTGYVGAF-KLLSTGGAYWRGDERNPMLQRVYGTSFPTKKELDAHLAKL 239

Query: 239 EESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINT 296
           EE ++RDHRKL +E+DL  I ++ G G++ WH KG  I   + ++ R   IKD Y+ + +
Sbjct: 240 EEIKRRDHRKLGKELDLITIQDEIGPGLVLWHPKGSLIRLLIENFWREQHIKDGYDLVYS 299

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P V    LW+ SGH D YR NMFA         +   + LKPMNCP H+ ++   ++SYR
Sbjct: 300 PHVARLDLWKTSGHVDYYRENMFASMKL-----EGSEYQLKPMNCPFHIMIYKSHMRSYR 354

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +LP+R  E G+VYR E +G LHGL+RVRGFTQDDAH+FC  +Q+  E  ++ +    +  
Sbjct: 355 DLPIRYGELGTVYRYERTGVLHGLLRVRGFTQDDAHLFCRPDQIEAEVSRVLDFTFFVLG 414

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
            FGF +  V LSTRP+K VGS+  W  A N ++  L +        +   V  GEG FYG
Sbjct: 415 TFGFTEFEVYLSTRPDKSVGSEENWTIATNALEAALKS------RGVAYEVDPGEGVFYG 468

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK +  +KD +GR WQC T+QVDFN P RF   Y     +   P+MIHRA+ GSIERF G
Sbjct: 469 PKIDIKIKDVLGRSWQCSTVQVDFNNPERFKLAYTGEDGKAHQPIMIHRALMGSIERFFG 528

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           I+IE++ G  P WL+P+QA+V TIT +  E+A +I + LKSH   +E D RNE I +KIR
Sbjct: 529 ILIEHYAGAFPTWLAPVQAVVLTITDNQQEFAAKIVSTLKSHGFRVEADLRNEKIGFKIR 588

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           E    KIP +++ GDKE     + +R         + +   + +L  ++
Sbjct: 589 EAEKNKIPYMLVVGDKEVQSGMVAVRGRSGANHGSMPIEAFLELLRTDA 637


>gi|149180875|ref|ZP_01859377.1| threonyl-tRNA synthetase [Bacillus sp. SG-1]
 gi|148851394|gb|EDL65542.1| threonyl-tRNA synthetase [Bacillus sp. SG-1]
          Length = 647

 Score =  657 bits (1695), Expect = 0.0,   Method: Composition-based stats.
 Identities = 284/645 (44%), Positives = 430/645 (66%), Gaps = 19/645 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
            +I + FPDG  KN+P   + +++A+SIS SL K++    +NG + DL+  +  + SIE+
Sbjct: 6   KEIIIKFPDGKEKNYPAGVSLAEIAQSISPSLKKRSAGGKVNGVLFDLNRRIEEDASIEL 65

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           ++ +    + ++RHS AHI+A+AVQ ++  VQ+ +GP+I++GFYYD D E+  S  +L +
Sbjct: 66  LSLQSEEGVKMMRHSAAHILAQAVQRLYGNVQLGVGPVIDNGFYYDLDLEKSLSQSDLVE 125

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK+M+ II+ + P  ++ LS ++A  L     +  KVE++E IP  E +++YRQGE+ D
Sbjct: 126 IEKEMKNIISENHPISREELSRKEAESL--FSSDPLKVELIEDIPEDETLSVYRQGEFVD 183

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ STG VK F KL  V+GAYWRGDSN  +L R+YG A+ +Q+EL +Y  FLEE+
Sbjct: 184 LCRGPHLPSTGMVKAF-KLTHVSGAYWRGDSNNKVLQRVYGVAFPSQEELDEYFLFLEEA 242

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           +KR+HRKL  E++LF  +E+  G+ F+   G KI   L S++R+ +   DYEE+ TP ++
Sbjct: 243 QKRNHRKLGNELELFMFSEEAPGMPFYLNNGQKIRNELESFLRQIQNSFDYEEVRTPIMM 302

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ LW+QSGHW+ Y+ NM+  +       D ++FALKPMNCPGH+ +F   L SYR+LP+
Sbjct: 303 NRKLWEQSGHWEHYKENMYFSEV------DDQSFALKPMNCPGHMLIFKDKLHSYRDLPI 356

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AEFG V+R+E SG+L+G++RVR F QDDAH+F T +Q+  E      LI  +Y+ FGF
Sbjct: 357 RMAEFGQVHRHEFSGALNGMLRVRTFCQDDAHIFVTPDQIEEEITSALKLIDHVYRTFGF 416

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
               ++LSTRPE  +G +ALWD AE  +K VL  +  S        +  G+GAFYGPK +
Sbjct: 417 NY-DIELSTRPEDYMGEEALWDKAEGSLKNVLTKLGYS------FSINEGDGAFYGPKID 469

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
             +KDA+ R  QC T+Q+DF +P +F   Y++ +++K  PV+IHRAVFGSI+RF+GI+IE
Sbjct: 470 IHIKDALKRSHQCATVQLDFQMPEKFELHYIDENNQKVRPVVIHRAVFGSIDRFLGILIE 529

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAV-EYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           +F G  P+WLSP+Q  V  ++     +Y +EI + LK   L +E D R E + YKIRE  
Sbjct: 530 HFAGAFPVWLSPLQVSVIPVSKRHHGQYCEEIRSRLKEEGLRVECDLREEKLGYKIREAQ 589

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +KK P I++ GDKE   +++ +R +G   +Q+  L + I  + ++
Sbjct: 590 MKKAPYILVVGDKEQESQTVNVRSYGEQNSQEEKLEEFIARVKQQ 634


>gi|194017082|ref|ZP_03055694.1| threonyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
 gi|194010950|gb|EDW20520.1| threonyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
          Length = 646

 Score =  657 bits (1695), Expect = 0.0,   Method: Composition-based stats.
 Identities = 265/656 (40%), Positives = 417/656 (63%), Gaps = 23/656 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M   I+LTFPDG++K F   AT  D+A SIS  L KKA+A  +NGK  DL  P+   G+I
Sbjct: 1   MSEQIQLTFPDGAVKEFDKTATTEDIAASISPGLKKKALAGKLNGKEIDLRTPLLESGTI 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWP---EVQVAIGPIIEDGFYYDFDKEQPFSS 116
           EIIT +   +L ++RHS AH++A+A++ ++     VQ  +GP+IE+GFYYD D +   + 
Sbjct: 61  EIITDKSDEALDIMRHSTAHLLAQAIKRLYGKEHHVQFGVGPVIENGFYYDVDIDVAITP 120

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
           ++L +IEK+M++II  + P  +  +S E+A++ FE+  +  K+E+LE+IP  E VT+Y Q
Sbjct: 121 EDLPKIEKEMKKIINSNLPIERIEVSREEAKKRFEAIGDQLKLELLEAIPEGEAVTIYEQ 180

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           GE+FDLCRG H+ STG++K+F KL+ +AGAYWRGDSN  ML RIYGTA+ ++ +L ++L 
Sbjct: 181 GEFFDLCRGIHLSSTGKIKEF-KLLSLAGAYWRGDSNNQMLQRIYGTAFFSKDDLNEHLR 239

Query: 237 FLEESEKRDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEI 294
            LEE+++RDHRKL +E+ LF +  + G G+  W  KG  I + +  Y+  ++++  YE +
Sbjct: 240 LLEEAKERDHRKLGKELKLFANSQKVGQGLPLWLPKGATIRRVIERYIVDKEVRLGYEHV 299

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
            TP + +  L++ SGHW  Y+ +MF V   D+         L+PMNCP H+ ++ +   S
Sbjct: 300 YTPVLANVELYKTSGHWAHYQEDMFPVMEMDN-----EDLVLRPMNCPHHMMIYKNEPHS 354

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YRELP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+ +E ++   LI  +
Sbjct: 355 YRELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKDEFIRTVRLIEEV 414

Query: 415 YKDFGFEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
           Y+DFG      +LS R      K    DA+W+ A++++K  +D + +      +     G
Sbjct: 415 YQDFGLNDYTFRLSYRDPEDTEKYFDDDAMWNKAQSMLKDAMDELGH------DYYEAEG 468

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           E AFYGPK +  +K A+G++    T+QVDF LP RF+  Y+    +   PV+IHR V  +
Sbjct: 469 EAAFYGPKLDVQVKTALGKEETLSTVQVDFLLPERFDLTYIGEDGKHHRPVVIHRGVVST 528

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNE 589
           +ERF+  +IE +KG LP WL+P+Q  V  ++ S  ++YA+++   L+   L +E D R+E
Sbjct: 529 MERFVAFLIEEYKGALPTWLAPVQFQVIPVSPSVHLDYAKKVQERLQLEGLRVELDSRDE 588

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
            I YKIRE  ++KIP +++ GD+EA   ++ +R++G   ++ + L   +     E+
Sbjct: 589 KIGYKIREAQMQKIPYMLVVGDQEAENGAVNVRKYGEQDSETMDLEAFVKHAVAEA 644


>gi|51473419|ref|YP_067176.1| threonyl-tRNA synthetase [Rickettsia typhi str. Wilmington]
 gi|73919822|sp|Q68XE8|SYT_RICTY RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|51459731|gb|AAU03694.1| Threonine translase [Rickettsia typhi str. Wilmington]
          Length = 635

 Score =  657 bits (1695), Expect = 0.0,   Method: Composition-based stats.
 Identities = 315/644 (48%), Positives = 443/644 (68%), Gaps = 15/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            I ++FPDGS+K F  + T  ++A +IS SLAK A+ V ING+  DLS  +  +  + I+
Sbjct: 1   MINISFPDGSVKQFAQNITAFEIANAISMSLAKAAMVVEINGEFKDLSTVIEHDCKLRIL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   L +IRH  AH+ A AV+ ++PE QVAIGP IE+G+YYDF +++PFS D+LA I
Sbjct: 61  TAKDYECLEIIRHDAAHLTAAAVKELFPETQVAIGPAIENGYYYDFARDKPFSRDDLATI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E KMQE++ ++    ++    +KA E F S  E YK +I+ SIPA E +TLYRQG + DL
Sbjct: 121 EAKMQELVKKNEKITRELWDRDKAIEFFLSIGEHYKAKIIASIPAGEQITLYRQGNFIDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH  STG VK F KLMKVAGAYWRG+S   ML RIYGTAW T+++L  YL+ LEE+E
Sbjct: 181 CRGPHAPSTGFVKYF-KLMKVAGAYWRGNSRNEMLQRIYGTAWATKEQLDNYLFMLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD 301
           KRDHRK+ +E+DLFH  E+  G++FWH KGW I+ T+  Y+R+K + + Y E+ TP ++D
Sbjct: 240 KRDHRKIGKELDLFHFQEEAQGMVFWHDKGWSIYNTIEQYIRKKNRKNGYIEVKTPVLVD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW  +R +MF ++       D +  ALKPMNCP HV +F  G+KSYR+LP+R
Sbjct: 300 KSLWEASGHWAKFRCDMFTLET------DDKILALKPMNCPCHVQIFKQGIKSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           ++EFG  +RNE SG+LHGLMRVR   QDDAH+FC +EQ+ +E ++   L+  +YKDFGF 
Sbjct: 354 MSEFGLCHRNEASGALHGLMRVRSLVQDDAHIFCAEEQITDETVRFCKLLTEVYKDFGFT 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            I VK S RPE R G+D +WD AE+ +K  ++ +           +  G+GAFYGPK E+
Sbjct: 414 DIKVKFSDRPEIRAGNDEVWDKAEHALKTAVEKVG------FIYTLNPGDGAFYGPKLEF 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
           +L DAIGR WQCGT+Q+DF LP R +A Y+ +  EK  PVM+HRA+ GS+ERFIGI+IE 
Sbjct: 468 VLTDAIGRQWQCGTLQMDFVLPERLDANYIAASGEKKRPVMLHRAILGSLERFIGILIEE 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  P+WL+P+Q  + TIT+   +YA E+   L  +++  + +   + INYKIRE S +
Sbjct: 528 YAGKFPIWLAPVQVAIATITNDLNDYALEVQKTLIDNNIRTDINISPDKINYKIREFSNQ 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           KIP+I + G KE + + + IR+FG+T  + +S+   I ++ KE+
Sbjct: 588 KIPMIAVIGKKEQANKQVTIRKFGTTGQEILSIEQLIAMIKKEN 631


>gi|15604092|ref|NP_220607.1| threonyl-tRNA synthetase [Rickettsia prowazekii str. Madrid E]
 gi|2501061|sp|O05947|SYT_RICPR RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|2073475|emb|CAA72469.1| threonyl-tRNA synthetase [Rickettsia prowazekii]
 gi|3860783|emb|CAA14684.1| THREONYL-TRNA SYNTHETASE (thrS) [Rickettsia prowazekii]
 gi|292571818|gb|ADE29733.1| Threonyl-tRNA synthetase [Rickettsia prowazekii Rp22]
          Length = 635

 Score =  657 bits (1695), Expect = 0.0,   Method: Composition-based stats.
 Identities = 312/644 (48%), Positives = 435/644 (67%), Gaps = 15/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            I ++FPDGS+K F  + T  ++  +IS SLAK A+ V ING++ DLS  +  +  + I+
Sbjct: 1   MINISFPDGSVKQFAQNITAFEIVNAISMSLAKAAIVVEINGELKDLSTVIENDCKLRIL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   L +IRH  AH+ AEAV+ ++PE QV IGP IE+G+YYDF +++PFS D+LA I
Sbjct: 61  TAQDYECLEIIRHDAAHLTAEAVKELFPETQVTIGPAIENGYYYDFARDKPFSIDDLANI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E KMQE+  ++    ++    +KA E F S  E YK +I+ SIP  E +TLYRQG + DL
Sbjct: 121 EAKMQELSKKNEKITRELWDRDKAVEFFLSIGEHYKAKIIASIPEGEPITLYRQGNFIDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH  STG VK F KLMKVAGAYWRG+S   ML RIYGTAW T+++L  YL+ LEE+E
Sbjct: 181 CRGPHSPSTGFVKHF-KLMKVAGAYWRGNSRNEMLQRIYGTAWATKEQLDNYLFMLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD 301
           KRDHRK+ +E+DLFH  E+  G++FWH KGW I+ T+  Y+R+KI+ + Y E+ TP ++D
Sbjct: 240 KRDHRKIGKELDLFHFQEEAQGMVFWHDKGWSIYNTIEQYIRKKIRKNGYIEVKTPVLVD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW  +R +MF ++  D T       ALKPMNCP HV +F  G+KSYR+LP+R
Sbjct: 300 KSLWEASGHWAKFRCDMFTLETDDKT------LALKPMNCPCHVQIFKQGIKSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           ++EFG  +RNE SG+LHGLMRVR   QDDAH+FC +EQ+ +E ++   L+  +YKDFGF 
Sbjct: 354 MSEFGLCHRNEASGALHGLMRVRSLVQDDAHIFCAEEQITDETVRFCKLLTEVYKDFGFT 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            I VK S R E   G+D +WD AEN +K  ++             +  GE AFYGPK E+
Sbjct: 414 DIKVKFSDRSEICAGNDEVWDKAENALKTAIEKAG------FIYTLNPGEAAFYGPKIEF 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
           +L DAIGR WQCGT+Q+DF LP R +A Y+ +  EK  PVM+HRA+ GS+ERFIGI+IE 
Sbjct: 468 VLTDAIGRQWQCGTLQMDFVLPERLDANYIAASGEKKRPVMLHRAILGSLERFIGILIEE 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  P+WL+P+Q  + TIT+   +YA E+   L  + +  + +   + INYKIRE S +
Sbjct: 528 YAGKFPIWLAPVQVAIATITNDLNDYALEVQKTLIDNGVRTDINISPDKINYKIREFSNQ 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           KIPII + G +E + + + IR+ G+   + +S+   I ++ KE+
Sbjct: 588 KIPIIAVIGKQEQANKQVTIRKLGTIEQEILSIEQLIAMIKKEN 631


>gi|209558991|ref|YP_002285463.1| threonyl-tRNA synthetase [Streptococcus pyogenes NZ131]
 gi|238065119|sp|B5XKA6|SYT_STRPZ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|209540192|gb|ACI60768.1| Threonyl-tRNA synthetase [Streptococcus pyogenes NZ131]
          Length = 647

 Score =  657 bits (1695), Expect = 0.0,   Method: Composition-based stats.
 Identities = 272/660 (41%), Positives = 410/660 (62%), Gaps = 26/660 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            IK+TFPDG+++ F    T  D+AESIS+SLAKKA+A   N ++ D +  +  +GSIEI+
Sbjct: 1   MIKITFPDGAVREFESGVTTFDIAESISKSLAKKALAGKFNDQLIDTTRAIEEDGSIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQ 121
           TP+   +  V+RHS AH+ A+A + ++P + + +GP I +GFYYD D  E   S+++L +
Sbjct: 61  TPDHKDAYEVLRHSAAHLFAQAAKRLFPNLHLGVGPAIAEGFYYDTDNAEGQISNEDLPR 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE +MQ+I+  + P +++ ++ E+A ELF+   + YKVE++    A   +T+YRQGE+ D
Sbjct: 121 IEAEMQKIVTENYPCIREEVTKEEALELFK--DDPYKVELINE-HAGAGLTVYRQGEFVD 177

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ RIYGTAW  +++L  YL  LEE+
Sbjct: 178 LCRGPHVPSTGRIQVFHLL-NVAGAYWRGNSDNNMMQRIYGTAWFDKKDLKAYLTRLEEA 236

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+++   G+ FW   G  I +TL  Y+  +++   Y+ + TP +
Sbjct: 237 KERDHRKLGKELDLFMISQEVGQGLPFWLPDGATIRRTLERYITDKELASGYQHVYTPPL 296

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHWD Y+ +MF V        D   F L+PMNCP H+ V+ + ++SYRELP
Sbjct: 297 ASVELYKTSGHWDHYQEDMFPVMDMG----DGEEFVLRPMNCPHHIQVYKNHVRSYRELP 352

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  T +D H+F T EQ+  E  +   LII +Y DF 
Sbjct: 353 IRIAELGMMHRYEKSGALSGLQRVREMTLNDGHIFVTPEQIQEEFQRALQLIIDVYADFN 412

Query: 420 FEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R      K   +D +W++A++++K  LD +       ++     GE AFY
Sbjct: 413 LTDYRFRLSYRDPNDTHKYYDNDEMWENAQSMLKAALDEMG------VDYFEAEGEAAFY 466

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G +    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF 
Sbjct: 467 GPKLDIQVKTALGNEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMIHRGVISTMERFT 526

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IE +KG  P WL+P Q  V  I++   ++YA E+A +L+   +  + D RNE + YK
Sbjct: 527 AILIETYKGAFPTWLAPHQVTVIPISNEAHIDYAWEVAKILRDRGVRADVDDRNEKMQYK 586

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE---SLPPDCQ 651
           IR     KIP  +I GDKE  ++S+ +RR+GS  T   S+ D +  +  +      PD Q
Sbjct: 587 IRASQTSKIPYQLIVGDKEMEDKSVNVRRYGSKATHTESVEDFVENILADIARKSRPDAQ 646


>gi|307705352|ref|ZP_07642214.1| threonyl-tRNA synthetase [Streptococcus mitis SK597]
 gi|307621139|gb|EFO00214.1| threonyl-tRNA synthetase [Streptococcus mitis SK597]
          Length = 647

 Score =  657 bits (1695), Expect = 0.0,   Method: Composition-based stats.
 Identities = 263/651 (40%), Positives = 406/651 (62%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  +  +GSIEI+
Sbjct: 1   MINITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRTITEDGSIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQ 121
           TP+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D      S+++L +
Sbjct: 61  TPDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNTAGQISNEDLPR 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWF 180
           IE++MQ+I+  + P +++ ++ ++ARE+F+   + YK+E++E     E  +T+YRQGE+ 
Sbjct: 121 IEEEMQKIVKENFPSIREEVTKDEAREIFK--NDPYKLELIEEHSEDEGGLTIYRQGEYV 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ RIYGTAW  +++L  YL   EE
Sbjct: 179 DLCRGPHVPSTGRIQIFHLLH-VAGAYWRGNSDNAMMQRIYGTAWFDKKDLKNYLQMREE 237

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           +++RDHRKL +E+DLF I+++   G+ FW   G  I + L  Y+  +++   Y+ + TP 
Sbjct: 238 AKERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVDKELASGYQHVYTPP 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L++ SGHWD Y+ +MF          D   F L+PMNCP H+ VF H + SYREL
Sbjct: 298 LASVELYKTSGHWDHYQEDMFPTMDMG----DGEEFVLRPMNCPHHIQVFKHHVHSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y DF
Sbjct: 354 PIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYGDF 413

Query: 419 GFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
              +   +LS R      K   +D +W++A+ +++  LD +       ++     GE AF
Sbjct: 414 NLNEYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAF 467

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K A+G++    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF
Sbjct: 468 YGPKLDIQVKTALGKEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMIHRGVISTMERF 527

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
             I+IEN+KG  P WL+P Q  +  ++    V+YA E+A  L+   +  + D RNE + +
Sbjct: 528 TAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAKKLRDRGVRADVDERNEKMQF 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR     KIP  +I GDKE  + ++ +RR+G   TQ V + D +  +  +
Sbjct: 588 KIRASQTSKIPYQLIVGDKEMEDGTVNVRRYGQKETQTVLVDDFVQAILAD 638


>gi|313890276|ref|ZP_07823910.1| threonine--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026]
 gi|313121381|gb|EFR44486.1| threonine--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026]
          Length = 648

 Score =  657 bits (1695), Expect = 0.0,   Method: Composition-based stats.
 Identities = 265/651 (40%), Positives = 406/651 (62%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+TFPDG+++ +    T  +VA+SIS SLAKKA+A   N ++ D + P+  +G+IEI+
Sbjct: 1   MIKITFPDGAVREYESGITTFEVAQSISNSLAKKALAGKFNDQLVDTNRPLVEDGNIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQ 121
           TP+   +  ++RHS AH+ A+A + ++P++ + +GP I DGFYYD D +    S+++L +
Sbjct: 61  TPDHEDAFDILRHSAAHLFAQAAKRLFPDIHLGVGPAIADGFYYDTDNQAGQISNEDLPR 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKE-NVTLYRQGEWF 180
           IE++M++I+  + P ++Q +S E+A E+F+   + YK+E++         +T+YRQGE+ 
Sbjct: 121 IEEEMKKIVKENHPCIRQEVSKEEALEIFK--DDPYKIELINEHSDDAAGLTIYRQGEFV 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV STG+++ F  L  VAGAYWRG+S+ PM+ R+YGTAW  +++L  YL  LEE
Sbjct: 179 DLCRGPHVPSTGRIQVFHLL-NVAGAYWRGNSDNPMMQRVYGTAWFDKKDLKAYLTRLEE 237

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           +++RDHRKL +E+DLF +  +   G+ FW   G  I +TL  Y+  +++   Y+ + TP 
Sbjct: 238 AKERDHRKLGKELDLFMVNPEVGQGLPFWLPNGATIRRTLERYITDKELASGYQHVYTPP 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +     ++ SGHWD YR +MF          D   F L+PMNCP H+ V+ H + SYREL
Sbjct: 298 MASVDFYKTSGHWDHYREDMFPTMDMG----DGEEFVLRPMNCPHHIEVYKHHVHSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  T +D H+F T +Q+  E  +   LII +YKDF
Sbjct: 354 PIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHLFVTPDQIQEEFQRALQLIIDVYKDF 413

Query: 419 GFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
                  +LS R          +D +W+ A++++K  LD +       ++     GE AF
Sbjct: 414 NLTDYRFRLSYRDPNDKEKYFDNDEMWEKAQSMLKAALDEMG------VDYFEAEGEAAF 467

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K A+G +    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF
Sbjct: 468 YGPKLDIQVKTALGNEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMIHRGVISTMERF 527

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINY 593
             I+IE +KG  P WL+P Q  V  I++   V+YA E+A LL+   + ++ D RNE + Y
Sbjct: 528 TAILIETYKGAFPTWLAPHQVTVIPISNEAHVDYAWEVAKLLRDKGVRVDVDDRNEKMQY 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR     KIP  +I GDKE  E+S+ +RR+GS  TQ V++ + +  +  +
Sbjct: 588 KIRASQTGKIPYQLIVGDKEMDEKSVNVRRYGSKVTQTVAISEFVDTILAD 638


>gi|314933837|ref|ZP_07841202.1| threonine--tRNA ligase [Staphylococcus caprae C87]
 gi|313653987|gb|EFS17744.1| threonine--tRNA ligase [Staphylococcus caprae C87]
          Length = 645

 Score =  657 bits (1695), Expect = 0.0,   Method: Composition-based stats.
 Identities = 259/650 (39%), Positives = 406/650 (62%), Gaps = 21/650 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
             I + FPDG+ K F    T  D+A+SIS  L KKAVA   NG++ DL+ P+  +GSIEI
Sbjct: 2   DQINIQFPDGNSKEFDKGTTTEDIAQSISPGLRKKAVAGKFNGQMVDLTRPLEEDGSIEI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +TP    +L V+RHS AH+MA+A++ ++ +V+  +GP++E GFYYDFD ++  SSD+  +
Sbjct: 62  VTPGSEEALEVLRHSTAHLMAQALKRLYGDVKFGVGPVVEGGFYYDFDMDEKVSSDDFEK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK M++I+  +    ++ +S ++A+E F+   + YK+E++++IP  E+VTLY QGE+ D
Sbjct: 122 IEKTMKQIVNENYKIERKVVSRDEAKEFFK--DDPYKLELIDAIPEDESVTLYSQGEFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG HV ST ++K+F KL+  AGAYWRGDSN  ML RIYGTA+  +++L  +L  LEE 
Sbjct: 180 LCRGVHVPSTSKIKEF-KLLSTAGAYWRGDSNNKMLQRIYGTAFFDKKDLKAHLQMLEER 238

Query: 242 EKRDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
            +RDHRK+ ++++LF +    G+G+  W   G  I + +  Y+  +++   Y+ + TP +
Sbjct: 239 RERDHRKIGKDLELFTNSQLVGAGLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVL 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +  L++ SGHWD Y+ +MF     D+T        L+PMNCP H+ ++N+   SYRELP
Sbjct: 299 ANVDLYKTSGHWDHYQDDMFPPMKLDET----EEMVLRPMNCPHHMMIYNNKPHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G+++R E SG++ GL RVRG T +D+H+F   +Q+  E  ++ N+I  +Y+DFG
Sbjct: 355 IRIAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVNMIQEVYEDFG 414

Query: 420 FEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           F+    +LS R      K +  D +W+ AE+++K  +D +       +     +GE AFY
Sbjct: 415 FKDYTFRLSYRDPEDKEKYMDDDEMWNKAESMLKEAVDEMG------LPYVEAIGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G++    T Q+DF LP RF   Y+ S  E+  PV+IHR V  ++ERF+
Sbjct: 469 GPKLDVQVKTAMGKEETLSTAQLDFLLPERFELTYIGSDGEQHRPVVIHRGVVSTMERFV 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             + E  KG  P WL+P Q  +  +      +YA+++ + LKS  + +E D RNE + YK
Sbjct: 529 AFLTEETKGAFPTWLAPKQVEIIPVNVDLHYDYARQLQDELKSQGVRVEIDDRNEKMGYK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IRE  ++KIP  I+ GDKE     + +R++GS   + +   + I  L  E
Sbjct: 589 IREAQMQKIPYQIVVGDKEVENNEVNVRQYGSQDQETLEKDEFIWNLVDE 638


>gi|223044090|ref|ZP_03614129.1| threonyl-tRNA synthetase [Staphylococcus capitis SK14]
 gi|222442484|gb|EEE48590.1| threonyl-tRNA synthetase [Staphylococcus capitis SK14]
          Length = 645

 Score =  657 bits (1695), Expect = 0.0,   Method: Composition-based stats.
 Identities = 259/650 (39%), Positives = 406/650 (62%), Gaps = 21/650 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
             I + FPDG+ K F    T  D+A+SIS  L KKAVA   NG++ DL+ P+  +GSIEI
Sbjct: 2   DQINIQFPDGNSKEFDKGTTTEDIAQSISPGLRKKAVAGKFNGQMVDLTRPLEEDGSIEI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +TP    +L V+RHS AH+MA+A++ ++ +V+  +GP++E GFYYDFD ++  SSD+  +
Sbjct: 62  VTPGSEEALEVLRHSTAHLMAQALKRLYGDVKFGVGPVVEGGFYYDFDMDEKVSSDDFDK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK M++I+  +    ++ +S ++A+E F+   + YK+E++++IP  E+VTLY QGE+ D
Sbjct: 122 IEKTMKQIVNENYKIERKVVSRDEAKEFFK--DDPYKLELIDAIPEDESVTLYSQGEFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG HV ST ++K+F KL+  AGAYWRGDSN  ML RIYGTA+  +++L  +L  LEE 
Sbjct: 180 LCRGVHVPSTSKIKEF-KLLSTAGAYWRGDSNNKMLQRIYGTAFFDKKDLKAHLQMLEER 238

Query: 242 EKRDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
            +RDHRK+ ++++LF +    G+G+  W   G  I + +  Y+  +++   Y+ + TP +
Sbjct: 239 RERDHRKIGKDLELFTNSQLVGAGLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVL 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +  L++ SGHWD Y+ +MF     D+T        L+PMNCP H+ ++N+   SYRELP
Sbjct: 299 ANVDLYKTSGHWDHYQDDMFPPMKLDET----EEMVLRPMNCPHHMMIYNNKPHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G+++R E SG++ GL RVRG T +D+H+F   +Q+  E  ++ N+I  +Y+DFG
Sbjct: 355 IRIAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVNMIQEVYEDFG 414

Query: 420 FEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           F+    +LS R      K +  D +W+ AE+++K  +D +       +     +GE AFY
Sbjct: 415 FKDYTFRLSYRDPEDKEKYMDDDEMWNKAESMLKEAVDEMG------LPYVEAIGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G++    T Q+DF LP RF   Y+ S  E+  PV+IHR V  ++ERF+
Sbjct: 469 GPKLDVQVKTAMGKEETLSTAQLDFLLPERFELTYIGSDGEQHRPVVIHRGVVSTMERFV 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             + E  KG  P WL+P Q  +  +      +YA+++ + LKS  + +E D RNE + YK
Sbjct: 529 AFLTEETKGAFPTWLAPKQVEIIPVNVDLHYDYARQLQDELKSQGVRVEIDDRNEKMGYK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IRE  ++KIP  I+ GDKE     + +R++GS   + +   + I  L  E
Sbjct: 589 IREAQMQKIPYQIVVGDKEVENNEVNVRQYGSQDQETLEKDEFIWNLVDE 638


>gi|295096109|emb|CBK85199.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Enterobacter
           cloacae subsp. cloacae NCTC 9394]
          Length = 622

 Score =  657 bits (1695), Expect = 0.0,   Method: Composition-based stats.
 Identities = 292/632 (46%), Positives = 421/632 (66%), Gaps = 16/632 (2%)

Query: 24  SDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMA 82
            DVA  I   LAK  +A  +NG++ D SD +  + ++ IIT +D   L +IRHSCAH++ 
Sbjct: 1   MDVALDIGPGLAKATIAGRVNGELVDASDLIESDATLAIITAKDEEGLEIIRHSCAHLLG 60

Query: 83  EAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLS 142
            A++ +WP  ++AIGP+I++GFYYD D +   + +++  +EK+M E+   +   +K+ +S
Sbjct: 61  HAIKQLWPNTKMAIGPVIDNGFYYDVDLDHTLTQEDIDALEKRMHELAETNYDVIKKKVS 120

Query: 143 HEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLM 201
             +ARE F  + E+YKV IL E+I   +   LY   E+ D+CRGPHV +      F KLM
Sbjct: 121 WHEARETFVKRGESYKVSILDENIAHDDKPGLYHHQEYVDMCRGPHVPNMRFCHHF-KLM 179

Query: 202 KVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED 261
           K+AGAYWRGDSN  ML RIYGTAW  ++ L  YL  LEE+ KRDHRK+ +++DL+H+ E+
Sbjct: 180 KIAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEE 239

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
             G++FWH  GW IF+ L +++R K+K+  Y+E+  P ++D+ LW+++GHWD+Y+  MF 
Sbjct: 240 APGMVFWHNDGWTIFRELETFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFT 299

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
                 T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+AEFGS +RNEPSG+LHGL
Sbjct: 300 ------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGL 353

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           MRVRGFTQDDAH+FCT++Q+  E      ++  +Y  FGFEKI+VKLSTRPEKR+GSD  
Sbjct: 354 MRVRGFTQDDAHIFCTEDQVREEVNACIRMVYDMYSTFGFEKIVVKLSTRPEKRIGSDET 413

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDF 500
           WD AE  +   L+      ++ I     LGEGAFYGPK E+ L D + R WQCGT+Q+DF
Sbjct: 414 WDRAEADLAVALE------ENGIPFEYQLGEGAFYGPKIEFTLYDCLDRAWQCGTVQLDF 467

Query: 501 NLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTI 560
           +LP R +A YV   +E+  PVMIHRA+ GS+ERFIGI+ E F G  P WL+P+Q +V  I
Sbjct: 468 SLPQRLSASYVGEDNERQVPVMIHRAILGSLERFIGILTEEFAGFFPTWLAPVQVVVMNI 527

Query: 561 TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
           T S  +Y +E+   L++  + ++ D RNE I +KIREH+++++P +++CGDKE     + 
Sbjct: 528 TDSQADYVKELTQKLQNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVA 587

Query: 621 IRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           +R         + + + I  L +E      Q+
Sbjct: 588 VRTRRGKDLGSLDVSEVIEKLQQEIRSRSLQQ 619


>gi|152976959|ref|YP_001376476.1| threonyl-tRNA synthetase [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|152025711|gb|ABS23481.1| threonyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98]
          Length = 643

 Score =  657 bits (1695), Expect = 0.0,   Method: Composition-based stats.
 Identities = 249/652 (38%), Positives = 402/652 (61%), Gaps = 20/652 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           M   +K+TFPDG++K FP   T  ++A SIS  L KKAVA  +N ++ DL  P+  +G+I
Sbjct: 1   MADVVKITFPDGAVKEFPKGITTEEIAASISPGLKKKAVAGKLNDEMLDLRTPIEKDGAI 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            I+T +    L ++RHS AH++A+A++ ++ +V++ IGP+IE+GFYYD D E+  + ++ 
Sbjct: 61  SIVTLDSEDGLYILRHSTAHLLAQALKRLYKDVKLGIGPVIENGFYYDIDMEEAITVEDF 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IEK+MQ+I+  +   ++  +   +A   +E   +  K+E++  +P    +++Y QGE+
Sbjct: 121 PKIEKEMQKIVNENLEIVRHEVPRAEALRRYEEINDELKLELINDLPEDAVISIYEQGEF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRG H+ STG++K F KL+ VAGAYWRGDSN  ML RIYGTA+  + EL +++  LE
Sbjct: 181 FDLCRGVHLPSTGKIKVF-KLLSVAGAYWRGDSNNKMLQRIYGTAFVKKAELDEHMRMLE 239

Query: 240 ESEKRDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTP 297
           E+++RDHRKL +E+ LF +  + G G+  W  KG  I + +  Y+  +++   Y  + TP
Sbjct: 240 EAKERDHRKLGKELKLFTNNQKVGQGLPLWLPKGATIRRIIERYIVDKEVSLGYNHVYTP 299

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +  + L++ SGHW+ YR  MF     D+         L+PMNCP H+ V+ + + SYRE
Sbjct: 300 VLGSRELYETSGHWNHYRDGMFPSMQMDN-----EELVLRPMNCPHHMMVYKNDIHSYRE 354

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+  E  ++ NL + +YKD
Sbjct: 355 LPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVYKD 414

Query: 418 FGFEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           FG E    +LS R      K    D +W+ A+ ++K  +D +       +      GE A
Sbjct: 415 FGLENYSFRLSYRDPEDTKKYYADDEMWEKAQGMLKEAMDEMG------LEYYEAEGEAA 468

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  ++ A+G+D    T+Q+DF LP RF   YV    ++  PV+IHR V  ++ER
Sbjct: 469 FYGPKLDVQVRTALGKDETLSTVQLDFLLPERFELTYVGEDGKQHRPVVIHRGVVSTMER 528

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETIN 592
           F+  +IE +KG  P WL+P+Q  V  ++    ++YA+++   L+   + +E D R E I 
Sbjct: 529 FVAFLIEEYKGAFPTWLAPVQVQVIPVSPQVHLDYAKKVQEELQRAGIRVEVDTREEKIG 588

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           YKIRE  ++KIP +++ GD E +E  + +R++G   ++ ++L   + ++  E
Sbjct: 589 YKIREAQMQKIPYMLVVGDNEVAENGVNVRKYGEQKSETIALDAFVDMIKVE 640


>gi|312898595|ref|ZP_07757985.1| threonyl-tRNA synthetase [Megasphaera micronuciformis F0359]
 gi|310620514|gb|EFQ04084.1| threonyl-tRNA synthetase [Megasphaera micronuciformis F0359]
          Length = 635

 Score =  657 bits (1694), Expect = 0.0,   Method: Composition-based stats.
 Identities = 277/640 (43%), Positives = 405/640 (63%), Gaps = 16/640 (2%)

Query: 6   KLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITP 64
           ++   DG+ + F    +  D    +S SLAKK +   ++G+V DL  PV++GS +E +T 
Sbjct: 3   EIILQDGAKREFADGCSLGDAVAQLSNSLAKKVLVAKVDGEVTDLRRPVKDGSTVEFLTF 62

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           E       +RH+ +HIMA+AV+ ++ +V+VAIGP IE+GFYYDFD E  F+ D+ A IE 
Sbjct: 63  ESQEGKDALRHTASHIMAQAVRRLFKDVKVAIGPAIENGFYYDFDTEHRFTKDDFAAIEA 122

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
           +M +I+  + P   + +S  +A  +FE + E YKVE+++ +P    +++YRQG+++DLC 
Sbjct: 123 EMHKIVKENLPVTYEEVSRAEALAMFEKENEIYKVELIKDLPEDATISVYRQGDFYDLCA 182

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +TGQVK F KL+ VAGAYWRGD    ML RIYGTA++ Q  L +YL   EE+E+R
Sbjct: 183 GPHVMTTGQVKAF-KLLSVAGAYWRGDEKNKMLQRIYGTAFDKQSSLDEYLKLREEAERR 241

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQH 303
           DHRKL +EMDLF   E+G G  F+H KG  + QTL+ +      + +Y++I+TP +L++ 
Sbjct: 242 DHRKLGKEMDLFSFHEEGPGFPFFHPKGMLLRQTLLKFWNELHDRYEYDQISTPIILNRQ 301

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+QSGHWD YR NM+       T  D   +A+KPMNCPG + V+   + SYR+ P+R A
Sbjct: 302 LWEQSGHWDHYRENMYF------TTIDDEPYAIKPMNCPGGILVYKSNVHSYRDFPMRTA 355

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           E G V+R+E  G+LHGL RVR FTQDDAH+F    QM  E   + +L    YK FG    
Sbjct: 356 ELGLVHRHELHGALHGLFRVRSFTQDDAHIFMLPSQMKKEITGVLDLFDEAYKMFGLPYH 415

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            V+LSTRPE  +GSD +WD A   +K  ++      +  +   +  G+GAFYGPK ++ +
Sbjct: 416 -VELSTRPENSMGSDEIWDLATQTLKEAIE------EKGVPYQINEGDGAFYGPKLDFHV 468

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           KD+IGR WQCGTIQ+D  +P RF+  YV    +K  PVM+HRA FGSIERFIGI+IE++ 
Sbjct: 469 KDSIGRTWQCGTIQLDMLMPERFDMTYVGEDGQKHRPVMVHRACFGSIERFIGILIEHYA 528

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P+WL+P Q  +  I+   ++YA E+    K   + +E D  NE I YKIR+  ++K+
Sbjct: 529 GAFPVWLAPTQVKILPISEKQMDYAVELRKKFKKAGIRVELDESNEKIGYKIRKAQMEKV 588

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           P + + G+KE  E+++ +R          ++ + I  + +
Sbjct: 589 PYMCVIGEKEVQEQTVSVRDRSQGDLGSRNVDEFIAHIQE 628


>gi|256763421|ref|ZP_05504001.1| threonyl-tRNA synthetase [Enterococcus faecalis T3]
 gi|256958077|ref|ZP_05562248.1| threonyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|257079964|ref|ZP_05574325.1| threonyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|256684672|gb|EEU24367.1| threonyl-tRNA synthetase [Enterococcus faecalis T3]
 gi|256948573|gb|EEU65205.1| threonyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|256987994|gb|EEU75296.1| threonyl-tRNA synthetase [Enterococcus faecalis JH1]
          Length = 645

 Score =  657 bits (1694), Expect = 0.0,   Method: Composition-based stats.
 Identities = 259/651 (39%), Positives = 401/651 (61%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +TFPDG++K F    T  DVA+SIS SLAKKA+A   NG + DL  P+  +GS+EI+
Sbjct: 2   SIHITFPDGAVKPFDSGVTTFDVAKSISNSLAKKALAGKFNGVLIDLDRPIAEDGSLEIV 61

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
           TP+   +L ++RHS AH+MA A++ ++P ++  +GP I+ GFYYD D  E P ++++L  
Sbjct: 62  TPDHEDALGILRHSSAHLMANALRRLFPNIKFGVGPAIDSGFYYDTDNGESPVTAEDLPA 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE +M +I+  ++P +++ +S  +A EL     + YKVE++  +P  E +T+Y QG++ D
Sbjct: 122 IEAEMMKIVKENNPIVRKEISRAEALEL--FADDPYKVELITDLPEDEIITVYDQGDFVD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG HV STG+++ F KL+ VAGAYWRG+S+  M+ RIYGTA+  +++L +++   EE+
Sbjct: 180 LCRGVHVPSTGRIQVF-KLLSVAGAYWRGNSDNHMMQRIYGTAFFDKKDLKEFIKMREEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF ++++ GSG+ FW  KG  I +T+  Y+  ++I   Y+ + TP +
Sbjct: 239 KERDHRKLGKELDLFMVSQEVGSGLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIM 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            D  L++ SGHWD Y  +MF          D     L+PMNCP H+ V+ + + SYRELP
Sbjct: 299 ADVELYKTSGHWDHYHEDMFPPMDMG----DGEMLVLRPMNCPHHMMVYKNDIHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  +   L++++Y DF 
Sbjct: 355 IRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVAVYADFN 414

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R           DA+W+ A+ ++K  +D ++      ++     GE AFY
Sbjct: 415 ITDYRFRLSYRDPNNTDKYFDDDAMWEKAQAMLKAAMDELE------LDYFEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK-CHPVMIHRAVFGSIERF 534
           GPK +  +K A+G +    TIQ+DF LP RF+  YV    E    PV+IHR +  ++ERF
Sbjct: 469 GPKLDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTMERF 528

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           +  + E +KG  P WL+PIQA +  ++  +  EYA EI   L++  L +E D RNE + Y
Sbjct: 529 VAYLTEVYKGAFPTWLAPIQATIIPVSVEAHSEYAYEIKERLQAQGLRVEVDDRNEKMGY 588

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR    +K+P  ++ GDKE  + ++ +RR+GS  T    L   I  +  E
Sbjct: 589 KIRASQTQKVPYQLVVGDKEMEDATVNVRRYGSKETSVEDLSIFIDSMAAE 639


>gi|237736526|ref|ZP_04567007.1| threonyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
 gi|229421568|gb|EEO36615.1| threonyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
          Length = 638

 Score =  657 bits (1694), Expect = 0.0,   Method: Composition-based stats.
 Identities = 299/647 (46%), Positives = 410/647 (63%), Gaps = 17/647 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV--REGSIEII 62
           +K+  P G +K F        VA+SIS SLAKK+VA  +N ++ D+S  +   E  IE I
Sbjct: 1   MKVILPSGDVKEFEGEVNLFTVAKSISNSLAKKSVAAKVNDELVDMSTVLNGEEFRIEFI 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TPE      +IRHS AH+MA+AV  ++P  +VAIGP IE+GFYYDFD ++ F+ ++LA+I
Sbjct: 61  TPETEEGEEIIRHSTAHLMAQAVVRLFPGTKVAIGPAIENGFYYDFDPKEQFTEEDLAKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M++I+  +    +  ++ E A + FE   E YKVEI++ I   E ++ Y+QGE+ DL
Sbjct: 121 EAEMKKIVKENEKIERVMMTREDAIKHFEELGEEYKVEIIKEIAQGEMLSFYKQGEFMDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV ST  +K F KL  VAGAYWRG+S+  ML RIYG A+  +++L  YL  LEE+E
Sbjct: 181 CRGPHVPSTSYLKAF-KLKSVAGAYWRGNSDNKMLQRIYGFAFADEKKLKDYLTLLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLIS-YMRRKIKDDYEEINTPQVLD 301
           KRDHRKL +E+DLF ++E G G   +  KG  I  TLI+ + R      Y EI TP +L+
Sbjct: 240 KRDHRKLGKELDLFFVSEYGPGFPIFLPKGMAIRNTLINLWKREHTLAGYTEIMTPIMLN 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW +YR NM+       +  D   FA+KPMNCPG +  + + L SY++LP+R
Sbjct: 300 KELWETSGHWYNYRENMYT------STIDETEFAIKPMNCPGGIIAYKYQLHSYKDLPIR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
             E G+V+R+E SG+LHGLMRVR FTQDDAH+F T EQ+  E + + NLI   Y      
Sbjct: 354 CGELGTVHRHEFSGALHGLMRVRCFTQDDAHIFMTPEQIEEEIIGVVNLIDKFYSKLFGF 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
           +  ++LST+PEK +GSD +W+ AE+ + G L+ I  S        +  G+GAFYGPK ++
Sbjct: 414 EYHIELSTKPEKAIGSDEIWEKAESALAGALEKIGKS------YKLNPGDGAFYGPKLDF 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDAIGR WQCGTIQ+DFNLP RF+  Y+    EK  PVMIHR V+GSIERFIGI+IE+
Sbjct: 468 KIKDAIGRTWQCGTIQLDFNLPERFDISYIGEDGEKHRPVMIHRVVYGSIERFIGILIEH 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH-SI 600
           + G  PLWL+P Q  V TI      YA+EI   L    +  E D R E+I YKIRE    
Sbjct: 528 YAGAFPLWLAPTQVKVLTINDETKPYAEEICRTLLERGIRAELDDRAESIGYKIREANGK 587

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLP 647
            K+P+ +I G  E   R + IRR GS     + L + + ++  E+  
Sbjct: 588 YKVPVQLIIGKNEVENREVNIRRRGSQEQTSMKLDEFLDMIVDEAQA 634


>gi|255974800|ref|ZP_05425386.1| threonyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|256616698|ref|ZP_05473544.1| threonyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|257081588|ref|ZP_05575949.1| threonyl-tRNA synthetase [Enterococcus faecalis E1Sol]
 gi|257084237|ref|ZP_05578598.1| threonyl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|257417026|ref|ZP_05594020.1| threonyl-tRNA synthetase [Enterococcus faecalis AR01/DG]
 gi|255967672|gb|EET98294.1| threonyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|256596225|gb|EEU15401.1| threonyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|256989618|gb|EEU76920.1| threonyl-tRNA synthetase [Enterococcus faecalis E1Sol]
 gi|256992267|gb|EEU79569.1| threonyl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|257158854|gb|EEU88814.1| threonyl-tRNA synthetase [Enterococcus faecalis ARO1/DG]
 gi|295113730|emb|CBL32367.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Enterococcus sp.
           7L76]
          Length = 645

 Score =  657 bits (1694), Expect = 0.0,   Method: Composition-based stats.
 Identities = 259/651 (39%), Positives = 401/651 (61%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +TFPDG++K F    T  DVA+SIS SLAKKA+A   NG + DL  P+  +GS+EI+
Sbjct: 2   SIHITFPDGAVKPFDSGVTTFDVAKSISNSLAKKALAGKFNGVLIDLDRPIVEDGSLEIV 61

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
           TP+   +L ++RHS AH+MA A++ ++P ++  +GP I+ GFYYD D  E P ++++L  
Sbjct: 62  TPDHEDALGILRHSSAHLMANALRRLFPNIKFGVGPAIDSGFYYDTDNGESPVTAEDLPA 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE +M +I+  ++P +++ +S  +A EL     + YKVE++  +P  E +T+Y QG++ D
Sbjct: 122 IEAEMMKIVKENNPIVRKEISRAEALEL--FADDPYKVELITDLPEDEIITVYDQGDFVD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG HV STG+++ F KL+ VAGAYWRG+S+  M+ RIYGTA+  +++L +++   EE+
Sbjct: 180 LCRGVHVPSTGRIQVF-KLLSVAGAYWRGNSDNHMMQRIYGTAFFDKKDLKEFIKMREEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF ++++ GSG+ FW  KG  I +T+  Y+  ++I   Y+ + TP +
Sbjct: 239 KERDHRKLGKELDLFMVSQEVGSGLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIM 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            D  L++ SGHWD Y  +MF          D     L+PMNCP H+ V+ + + SYRELP
Sbjct: 299 ADVELYKTSGHWDHYHEDMFPPMDMG----DGEMLVLRPMNCPHHMMVYKNDIHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  +   L++++Y DF 
Sbjct: 355 IRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVAVYADFN 414

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R           DA+W+ A+ ++K  +D ++      ++     GE AFY
Sbjct: 415 ITDYRFRLSYRDPNNTDKYFDDDAMWEKAQAMLKAAMDELE------LDYFEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK-CHPVMIHRAVFGSIERF 534
           GPK +  +K A+G +    TIQ+DF LP RF+  YV    E    PV+IHR +  ++ERF
Sbjct: 469 GPKLDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTMERF 528

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           +  + E +KG  P WL+PIQA +  ++  +  EYA EI   L++  L +E D RNE + Y
Sbjct: 529 VAYLTEVYKGAFPTWLAPIQATIIPVSVEAHSEYAYEIKERLQAQGLRVEVDDRNEKMGY 588

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR    +K+P  ++ GDKE  + ++ +RR+GS  T    L   I  +  E
Sbjct: 589 KIRASQTQKVPYQLVVGDKEMEDATVNVRRYGSKETSVEDLSIFIDSMAAE 639


>gi|171780136|ref|ZP_02921040.1| hypothetical protein STRINF_01924 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171281484|gb|EDT46919.1| hypothetical protein STRINF_01924 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 697

 Score =  657 bits (1694), Expect = 0.0,   Method: Composition-based stats.
 Identities = 265/662 (40%), Positives = 415/662 (62%), Gaps = 26/662 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
           S +K+TFPDG+++ F    T  ++A+SIS SLAKKA+A   NG++ D +  +  +GSIE+
Sbjct: 49  SMVKITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGELIDTTRAITEDGSIEV 108

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELA 120
           +TP+   +L ++RHS AH+ A+A + ++P++ + +GP IE+GFYYD D +    + ++L 
Sbjct: 109 VTPDHEDALGILRHSAAHLFAQAAKRLFPDLCLGVGPAIENGFYYDTDNKSGQITDEDLP 168

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEW 179
           +IE++M++I+  + P +++ +S E+ARELF+   + YK+E++E     E  +T+Y QGE+
Sbjct: 169 RIEEEMKKIVKENLPCVRKEISIEEARELFK--NDPYKLELIEEHGEDEGGLTVYTQGEF 226

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ R+YGTAW  +++L  YL   +
Sbjct: 227 TDLCRGPHVPSTGRIQVFHLL-NVAGAYWRGNSDNAMMQRVYGTAWFDKKDLKAYLKQRQ 285

Query: 240 ESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTP 297
           E+++RDHRKL +E+DLF I+++   G+ FW   G  I +TL  Y+  ++++  Y  + TP
Sbjct: 286 EAKERDHRKLGKELDLFMISQEVGQGLPFWLPDGATIRRTLERYIVDKEVESGYLHVYTP 345

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    L++ SGHWD YR +MF          D   F L+PMNCP H+ V+ + + SYRE
Sbjct: 346 PLASVDLYKTSGHWDHYREDMFPTMDMG----DGEEFVLRPMNCPHHIQVYKYHVHSYRE 401

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  K   LII +Y+D
Sbjct: 402 LPIRIAEIGMMHRYEKSGALSGLQRVREMSLNDGHLFVTPEQIQEEFQKALQLIIDVYED 461

Query: 418 FGFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           F   +   +LS R      K    D +W++A++++K  LD +       +      GE A
Sbjct: 462 FNLTEYRFRLSLRDPKDTHKYYDDDEMWENAQSMLKAALDEMG------VEYFEAEGEAA 515

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  +K A+G +    TIQ+DF LP RF   Y+ +  E+  PVMIHR V  ++ER
Sbjct: 516 FYGPKLDIQVKTALGNEETLSTIQLDFLLPERFGLTYIGADGEEHRPVMIHRGVISTMER 575

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETIN 592
           F  I+IEN+KG  P WL+P Q  V  +++   V+YA EIA +L+   + ++ D RNE + 
Sbjct: 576 FTAILIENYKGAFPTWLAPHQVTVIPVSNEAHVDYAWEIAKVLRDKGVRVDVDERNEKMQ 635

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE---SLPPD 649
            KIR+   KKIP  +I GDKE +++++ +RR+GS  T   S+ + +  +  +      PD
Sbjct: 636 LKIRQSQTKKIPYQLIVGDKEMADKTVNVRRYGSKQTHTESIDEFVENILADIDRKSRPD 695

Query: 650 CQ 651
            +
Sbjct: 696 AE 697


>gi|291486342|dbj|BAI87417.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. natto BEST195]
          Length = 638

 Score =  657 bits (1694), Expect = 0.0,   Method: Composition-based stats.
 Identities = 280/646 (43%), Positives = 421/646 (65%), Gaps = 16/646 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           M   + +  PDG IK +P   T  + A SIS SL KKA A  +NGK+ DLS  +  +  +
Sbjct: 1   MSKHVHIQLPDGQIKEYPKGITIKEAAGSISSSLQKKAAAGQVNGKLVDLSFKLEEDAEL 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            I+T +    L V+RH+ AH++A+AV+ ++ EV + +GP+IEDGFYYD    +  +S +L
Sbjct: 61  SIVTLDSQEGLQVLRHTSAHVLAQAVKRLYGEVSLGVGPVIEDGFYYDMKLGKSLASGDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEK+M+ II  +    +  +S+E+A ELF  K E  K+EIL+ IP  E++TLY+QGE+
Sbjct: 121 EAIEKEMKNIINENLEIKRIEVSYEEADELFAQKDERLKLEILKDIPRGEDITLYQQGEF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPH+ STG +K F KL +V+GAYWRGDS   +L R+YG A+  +++L  +L+ LE
Sbjct: 181 VDLCRGPHLPSTGMIKAF-KLTRVSGAYWRGDSKNEVLQRVYGVAFQKKKDLDAHLHMLE 239

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+ KRDHRKL +++ LF  +E+  G+ F+  KG  +   L  + R  +    Y E+ TP 
Sbjct: 240 EAAKRDHRKLGKQLGLFMFSEEAPGMPFYLPKGQIVRNELERFSRELQTNAGYNEVRTPF 299

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +++Q LW+QSGHWD YR NM+  +       D   FA+KPMNCPGH+ +F + L SYR+L
Sbjct: 300 MMNQRLWEQSGHWDHYRDNMYFSEV------DDTRFAMKPMNCPGHMLIFKNSLYSYRDL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG V+R+E SG+L+G++RVR F QDDAH+F  ++Q+ +E  +   LI  +Y+ F
Sbjct: 354 PIRMAEFGQVHRHEYSGALNGMLRVRTFCQDDAHIFVREDQIESEIKEAIRLIDEVYRTF 413

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE   V+LSTRPE  +G+D+LW+ +E  +  VL+ +       ++  +  G+GAFYGPK
Sbjct: 414 GFEYS-VELSTRPEDSLGNDSLWEASERALARVLEELG------LSYEINEGDGAFYGPK 466

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++ +KDA+ R  QC TIQ+DF +P +F+  Y+N H+EK  PV+IHRAVFGSI+RF GI+
Sbjct: 467 IDFHIKDALKRSHQCATIQLDFQMPEKFDLTYINEHNEKVRPVVIHRAVFGSIDRFFGIL 526

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE++ G  P+WL+P+Q  +  ++   ++Y +++   LK   +    D RNE + YKIRE 
Sbjct: 527 IEHYGGAFPVWLAPLQVQIIPVSHVHLDYCRKVQAELKQAGIRAGIDERNEKLGYKIRES 586

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            ++KIP +++ GD E  E ++ +RRFG   ++ V        L K+
Sbjct: 587 QVQKIPYVLVLGDHEEQENAVNVRRFGHQQSEHVPFQTFKDKLVKQ 632


>gi|157150881|ref|YP_001450077.1| threonyl-tRNA synthetase [Streptococcus gordonii str. Challis
           substr. CH1]
 gi|189083628|sp|A8AWB7|SYT_STRGC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|157075675|gb|ABV10358.1| threonyl-tRNA synthetase [Streptococcus gordonii str. Challis
           substr. CH1]
          Length = 647

 Score =  657 bits (1694), Expect = 0.0,   Method: Composition-based stats.
 Identities = 263/651 (40%), Positives = 408/651 (62%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  +  +GSIEI+
Sbjct: 1   MIKITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGSIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQ 121
           TP+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D      S+++L +
Sbjct: 61  TPDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNTAGQISNEDLPR 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWF 180
           IE++M++I+  + P +++ ++ ++ARE+F+   + YK+E++E     E  +T+YRQGE+ 
Sbjct: 121 IEEEMKKIVKENFPSIREEVTKDEAREIFK--NDPYKLELIEEHSEDEGGLTIYRQGEYV 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ RIYGTAW  +++L  YL   EE
Sbjct: 179 DLCRGPHVPSTGRIQIFHLLH-VAGAYWRGNSDNAMMQRIYGTAWFDKKDLKNYLQMREE 237

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           +++RDHRKL +E+DLF I+++   G+ FW   G  I + L  Y+  ++I   Y+ + TP 
Sbjct: 238 AKERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVDKEIAAGYQHVYTPP 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L++ SGHWD YR +MF          D   F L+PMNCP H+ VF H + SYREL
Sbjct: 298 LASVELYKTSGHWDHYREDMFPTMDMG----DGEEFVLRPMNCPHHIQVFKHHVHSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y+DF
Sbjct: 354 PIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYEDF 413

Query: 419 GFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
              +   +LS R      K   +D +W++A+ +++  LD +       ++     GE AF
Sbjct: 414 NLTEYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAF 467

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K A+G++    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF
Sbjct: 468 YGPKLDIQVKTALGKEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMIHRGVISTMERF 527

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
             I+IEN+KG  P WL+P Q  +  ++    V+YA E+A  L+   +  + D RNE + +
Sbjct: 528 TAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAKKLRDRGVRADVDERNEKMQF 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR     KIP  +I GDKE  + ++ +RR+G   T  V++ + +  +  +
Sbjct: 588 KIRASQTSKIPYQLIVGDKEMEDGTVNVRRYGQKETHTVAVDEFVEAILAD 638


>gi|19745635|ref|NP_606771.1| threonyl-tRNA synthetase [Streptococcus pyogenes MGAS8232]
 gi|94988057|ref|YP_596158.1| threonyl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
 gi|94991943|ref|YP_600042.1| threonyl-tRNA synthetase [Streptococcus pyogenes MGAS2096]
 gi|139474254|ref|YP_001128970.1| threonyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
 gi|306827837|ref|ZP_07461106.1| threonine--tRNA ligase [Streptococcus pyogenes ATCC 10782]
 gi|25453286|sp|Q8P234|SYT_STRP8 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|123080426|sp|Q1JMY5|SYT_STRPC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|123382336|sp|Q1JD10|SYT_STRPB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|166225506|sp|A2RFY5|SYT_STRPG RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|19747765|gb|AAL97270.1| putative threonyl-tRNA synthetase 1 [Streptococcus pyogenes
           MGAS8232]
 gi|94541565|gb|ABF31614.1| threonyl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
 gi|94545451|gb|ABF35498.1| Threonyl-tRNA synthetase [Streptococcus pyogenes MGAS2096]
 gi|134272501|emb|CAM30764.1| threonyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
 gi|304429946|gb|EFM32986.1| threonine--tRNA ligase [Streptococcus pyogenes ATCC 10782]
          Length = 647

 Score =  657 bits (1694), Expect = 0.0,   Method: Composition-based stats.
 Identities = 271/660 (41%), Positives = 409/660 (61%), Gaps = 26/660 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            IK+TFPDG+++ F    T  D+AESIS+SLAKKA+A   N ++ D +  +  +GSIEI+
Sbjct: 1   MIKITFPDGAVREFESGVTTFDIAESISKSLAKKALAGKFNDQLIDTTRAIEEDGSIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQ 121
           TP+   +  V+RHS AH+ A+A + ++P + + +GP I +GFYYD D  E   S+++L +
Sbjct: 61  TPDHKDAYEVLRHSAAHLFAQAAKRLFPNLHLGVGPAIAEGFYYDTDNAEGQISNEDLPR 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE +MQ+I+  + P +++ ++ E+A ELF+   + YKVE++    A   +T+YRQGE+ D
Sbjct: 121 IEAEMQKIVTENYPCIREEVTKEEALELFK--DDPYKVELINE-HAGAGLTVYRQGEFVD 177

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ RIYGTAW  +++L  YL  LEE+
Sbjct: 178 LCRGPHVPSTGRIQVFHLL-NVAGAYWRGNSDNNMMQRIYGTAWFDKKDLKAYLTRLEEA 236

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+++   G+ FW   G  I +TL  Y+  +++   Y+ + TP +
Sbjct: 237 KERDHRKLGKELDLFMISQEVGQGLPFWLPDGATIRRTLERYITDKELASGYQHVYTPPL 296

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHWD Y+ +MF V        D   F L+PMNCP H+ V+ + ++SYRELP
Sbjct: 297 ASVELYKTSGHWDHYQEDMFPVMDMG----DGEEFVLRPMNCPHHIQVYKNHVRSYRELP 352

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  T +D H+F T EQ+  E  +   LII +Y DF 
Sbjct: 353 IRIAELGMMHRYEKSGALSGLQRVREMTLNDGHIFVTPEQIQEEFQRALQLIIDVYADFN 412

Query: 420 FEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R      K   +D +W++A++++K  LD +       ++     GE AFY
Sbjct: 413 LTDYRFRLSYRDPNDTHKYYDNDEMWENAQSMLKAALDEMG------VDYFEAEGEAAFY 466

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G +    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF 
Sbjct: 467 GPKLDIQVKTALGNEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMIHRGVISTMERFT 526

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IE +KG  P WL+P Q  V  I++   ++YA E+A  L+   +  + D RNE + YK
Sbjct: 527 AILIETYKGAFPTWLAPHQVTVIPISNEAHIDYAWEVAKTLRDRGVRADVDDRNEKMQYK 586

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE---SLPPDCQ 651
           IR     KIP  +I GDKE  ++S+ +RR+GS  T   S+ + +  +  +      PD Q
Sbjct: 587 IRASQTSKIPYQLIVGDKEMEDKSVNVRRYGSKATHTESVEEFVENILADIARKSRPDAQ 646


>gi|21909901|ref|NP_664169.1| threonyl-tRNA synthetase [Streptococcus pyogenes MGAS315]
 gi|28896400|ref|NP_802750.1| threonyl-tRNA synthetase [Streptococcus pyogenes SSI-1]
 gi|25453285|sp|Q8K8C0|SYT_STRP3 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|21904088|gb|AAM78972.1| putative threonyl-tRNA synthetase [Streptococcus pyogenes MGAS315]
 gi|28811651|dbj|BAC64583.1| putative threonyl-tRNA synthetase 1 [Streptococcus pyogenes SSI-1]
          Length = 647

 Score =  657 bits (1694), Expect = 0.0,   Method: Composition-based stats.
 Identities = 272/660 (41%), Positives = 409/660 (61%), Gaps = 26/660 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            IK+TFPDG+++ F    T  D+AESIS+SLAKKA+A   N ++ D +  +  +GSIEI+
Sbjct: 1   MIKITFPDGAVREFESGVTTFDIAESISKSLAKKALAGKFNDQLIDTTRAIEEDGSIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQ 121
           TP+   +  V+RHS AH+ A+A + ++P + + +GP I +GFYYD D  E   S+++L +
Sbjct: 61  TPDHKDAYEVLRHSAAHLFAQAAKRLFPNLHLGVGPAIAEGFYYDTDNTEGQISNEDLPR 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE +MQ+I+  + P +++ ++ E+A ELF+   + YKVE++    A   +T+YRQGE+ D
Sbjct: 121 IEAEMQKIVTENYPCIREEVTKEEALELFK--DDPYKVELINE-HAGAGLTVYRQGEFVD 177

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ RIYGTAW  +++L  YL  LEE+
Sbjct: 178 LCRGPHVPSTGRIQVFHLL-NVAGAYWRGNSDNNMMQRIYGTAWFDKKDLKAYLTRLEEA 236

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+++   G+ FW   G  I +TL  Y+  +++   Y+ + TP +
Sbjct: 237 KERDHRKLGKELDLFMISQEVGQGLPFWLPDGATIRRTLERYITDKELASGYQHVYTPPL 296

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHWD Y+ +MF V        D   F L+PMNCP H+ V+ + ++SYRELP
Sbjct: 297 ASVELYKTSGHWDHYQEDMFPVMDMG----DGEEFVLRPMNCPHHIQVYKNHVRSYRELP 352

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  T +D H+F T EQ+  E  +   LII +Y DF 
Sbjct: 353 IRIAELGMMHRYEKSGALSGLQRVREMTLNDGHIFVTPEQIQEEFQRALQLIIDVYADFN 412

Query: 420 FEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R      K   +D +W++A++++K  LD +       ++     GE AFY
Sbjct: 413 LTDYRFRLSYRDPNDTHKYYDNDEMWENAQSMLKAALDEMG------VDYFEAEGEAAFY 466

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G +    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF 
Sbjct: 467 GPKLDIQVKTALGNEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMIHRGVISTMERFT 526

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IE +KG  P WL+P Q  V  I++   ++YA E+A  L+   +  + D RNE + YK
Sbjct: 527 AILIETYKGAFPTWLAPHQVTVIPISNEAHIDYAWEVAKTLRDRGVRADVDDRNEKMQYK 586

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE---SLPPDCQ 651
           IR     KIP  +I GDKE  E+S+ +RR+GS  T   S+ + +  +  +      PD Q
Sbjct: 587 IRASQTSKIPYQLIVGDKEMEEKSVNVRRYGSKATHTESVEEFVENILADIARKSRPDAQ 646


>gi|262282640|ref|ZP_06060408.1| threonyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
 gi|262261931|gb|EEY80629.1| threonyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
          Length = 647

 Score =  657 bits (1694), Expect = 0.0,   Method: Composition-based stats.
 Identities = 263/651 (40%), Positives = 409/651 (62%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  +  +GSIEI+
Sbjct: 1   MIKITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGSIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQ 121
           TP+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D +    S+++L +
Sbjct: 61  TPDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNQAGQISNEDLPR 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWF 180
           IE++M++I+  + P +++ ++ ++ARE+F+   + YK+E++E     E  +T+YRQGE+ 
Sbjct: 121 IEEEMKKIVKENFPSIREEVTKDEAREIFK--NDPYKLELIEEHSEDEGGLTIYRQGEYV 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ RIYGTAW  +++L  YL   EE
Sbjct: 179 DLCRGPHVPSTGRIQIFHLLH-VAGAYWRGNSDNAMMQRIYGTAWFDKKDLKNYLQMREE 237

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           +++RDHRKL +E+DLF I+++   G+ FW   G  I + L  Y+  ++I   Y+ + TP 
Sbjct: 238 AKERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVDKEIAAGYQHVYTPP 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L++ SGHWD YR +MF          D   F L+PMNCP H+ VF H + SYREL
Sbjct: 298 LASVELYKTSGHWDHYREDMFPTMDMG----DGEEFVLRPMNCPHHIQVFKHHVHSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y+DF
Sbjct: 354 PIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYEDF 413

Query: 419 GFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
              +   +LS R      K   +D +W++A+ +++  LD +       ++     GE AF
Sbjct: 414 NLTEYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAF 467

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K A+G++    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF
Sbjct: 468 YGPKLDIQVKTALGKEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMIHRGVISTMERF 527

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
             I+IEN+KG  P WL+P Q  +  ++    V+YA E+A  L+   +  + D RNE + +
Sbjct: 528 TAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAKKLRDRGVRADVDERNEKMQF 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR     KIP  +I GDKE  + ++ +RR+G   T  V++ + +  +  +
Sbjct: 588 KIRASQTSKIPYQLIVGDKEMEDGTVNVRRYGQKETHTVAVDEFVEAILAD 638


>gi|307707001|ref|ZP_07643798.1| threonyl-tRNA synthetase [Streptococcus mitis SK321]
 gi|307617527|gb|EFN96697.1| threonyl-tRNA synthetase [Streptococcus mitis SK321]
          Length = 647

 Score =  657 bits (1694), Expect = 0.0,   Method: Composition-based stats.
 Identities = 263/651 (40%), Positives = 407/651 (62%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  +  +GSIEI+
Sbjct: 1   MINITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGSIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQ 121
           TP+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D      S+++L +
Sbjct: 61  TPDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNTAGQISNEDLPR 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWF 180
           IE++MQ+I+  + P +++ ++ ++ARE+F+   + YK+E++E     E  +T+YRQGE+ 
Sbjct: 121 IEEEMQKIVKENFPSIREEVTKDEAREIFK--NDPYKLELIEEHSEDEGGLTIYRQGEYV 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ RIYGTAW  +++L  YL   EE
Sbjct: 179 DLCRGPHVPSTGRIQIFHLLH-VAGAYWRGNSDNAMMQRIYGTAWFDKKDLKNYLQMREE 237

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           +++RDHRKL +E+DLF I+++   G+ FW   G  I + L  Y+  +++   Y+ + TP 
Sbjct: 238 AKERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVDKELASGYQHVYTPP 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L++ SGHWD Y+ +MF          D   F L+PMNCP H+ VF H + SYREL
Sbjct: 298 LASVELYKTSGHWDHYQEDMFPTMDMG----DGEEFVLRPMNCPHHIQVFKHHVHSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y+DF
Sbjct: 354 PIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYEDF 413

Query: 419 GFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
              +   +LS R      K   +D +W++A+ +++  LD +       ++     GE AF
Sbjct: 414 NLTEYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAF 467

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K A+G++    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF
Sbjct: 468 YGPKLDIQVKTALGKEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMIHRGVISTMERF 527

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
             I+IEN+KG  P WL+P Q  +  ++    V+YA E+A  L+   +  + D RNE + +
Sbjct: 528 TAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAKKLRDRGVRADVDERNEKMQF 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR     KIP  +I GDKE  + ++ +RR+    TQ VS+ D +  +  +
Sbjct: 588 KIRASQTSKIPYQLIVGDKEMEDGTVNVRRYAQKETQTVSVDDFVQAILAD 638


>gi|56964462|ref|YP_176193.1| threonyl-tRNA synthetase [Bacillus clausii KSM-K16]
 gi|56910705|dbj|BAD65232.1| threonyl-tRNA synthetase [Bacillus clausii KSM-K16]
          Length = 643

 Score =  657 bits (1694), Expect = 0.0,   Method: Composition-based stats.
 Identities = 255/646 (39%), Positives = 409/646 (63%), Gaps = 20/646 (3%)

Query: 8   TFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPED 66
           TFPDG++K+FP+  T   +A SIS  L KKA+A  +NG + DL  P+  +G+IEI+    
Sbjct: 8   TFPDGTVKSFPIGTTTEAIAASISPGLKKKALAGKLNGTLYDLKTPLPEDGNIEIVVAGS 67

Query: 67  PRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKM 126
              L ++RHS AH++A+AV+ ++P V++ +GP+IEDGFYYD D ++  ++++L +IEK+M
Sbjct: 68  DEGLDIMRHSTAHVLAQAVKRLFPGVKLGVGPVIEDGFYYDIDADESITAEDLPRIEKEM 127

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGP 186
           ++II  +   L++ +S E+A   F+   + YK+E++E+IP +E VT+Y+QGE+FDLCRG 
Sbjct: 128 KKIIGENLEILREEVSREEAIARFKEINDPYKLELIEAIPEEETVTIYKQGEFFDLCRGV 187

Query: 187 HVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDH 246
           HV ST ++K+F KL+  AGAYWRGD+   ML RIYGTA+  + +L ++L  LEE+++RDH
Sbjct: 188 HVPSTNKIKEF-KLLSTAGAYWRGDAKNKMLQRIYGTAFFNKDDLNEHLRLLEEAKERDH 246

Query: 247 RKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHL 304
           RKL +E+ +F ++     G+  W  KG  I + +  Y+  K +   Y+ + TP +    L
Sbjct: 247 RKLGKELGIFALSPKVGQGLPLWLPKGATIRRIIERYIVDKEERLGYQHVYTPILGSSEL 306

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           ++ SGHWD Y+ +MF     D+      T  L+PMNCP H+ V+   ++SYR+LP+R+AE
Sbjct: 307 YKTSGHWDHYQDDMFPPMEMDN-----ETLVLRPMNCPHHMMVYKQDMRSYRQLPLRIAE 361

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
            G ++R E SG++ GL RVRG T +DAH+FC  +Q+  E +++  LI  +YKDFG     
Sbjct: 362 LGMMHRYEMSGAVSGLQRVRGMTLNDAHIFCRPDQIKEEFVRVVRLIQEVYKDFGLNDYK 421

Query: 425 VKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
            +LS R      K    D +W+ A+ ++K  +DT+     + I      GE AFYGPK +
Sbjct: 422 FRLSYRDPEDKEKYFDDDDMWNKAQAMLKEAMDTLGLPYYEAI------GEAAFYGPKLD 475

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
             +K A+G++    T+Q+DF LP RF+  YV    +   PV++HR V  ++ERF+  ++E
Sbjct: 476 VQVKTALGKEETLSTVQLDFLLPERFDLTYVGEDGKLHRPVVVHRGVVSTMERFVAFLLE 535

Query: 541 NFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
            +KG LP WL+P+Q  V  +++   ++YA+ +   L+   + +E D R+E + YKIRE  
Sbjct: 536 EYKGALPTWLAPVQVQVIPVSNEVHLDYAKRVIEQLQQAGVRVEIDDRDEKLGYKIREAQ 595

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           I+KIP +++ GDKE +  ++ +R++G   +    L   +  + KE+
Sbjct: 596 IQKIPYMLVLGDKEVAAEAVNVRKYGEQASSSQPLSVFVDEIGKEA 641


>gi|322377382|ref|ZP_08051873.1| threonine--tRNA ligase [Streptococcus sp. M334]
 gi|321281582|gb|EFX58591.1| threonine--tRNA ligase [Streptococcus sp. M334]
          Length = 647

 Score =  657 bits (1694), Expect = 0.0,   Method: Composition-based stats.
 Identities = 264/651 (40%), Positives = 408/651 (62%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  +  +GSIEI+
Sbjct: 1   MINITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGSIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQ 121
           TP+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D      S+++L +
Sbjct: 61  TPDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNTAGQISNEDLPR 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWF 180
           IE++MQ+I+  + P +++ ++ ++ARE+F+   + YK+E++E     E  +T+YRQGE+ 
Sbjct: 121 IEEEMQKIVKENFPSIREEVTKDEAREIFK--NDPYKLELIEEHSEDEGGLTIYRQGEYV 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ RIYGTAW  +++L  YL   EE
Sbjct: 179 DLCRGPHVPSTGRIQIFHLL-NVAGAYWRGNSDNAMMQRIYGTAWFDKKDLKNYLQMREE 237

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           +++RDHRKL +E+DLF I+++   G+ FW   G  I + L  Y+  +++   Y+ + TP 
Sbjct: 238 AKERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVDKELASGYQHVYTPP 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L++ SGHWD Y+ +MF          D   F L+PMNCP H+ VF H + SYREL
Sbjct: 298 LASVELYKTSGHWDHYQEDMFPTMDMG----DGEEFVLRPMNCPHHIQVFKHHVHSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y+DF
Sbjct: 354 PIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYEDF 413

Query: 419 GFEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
              +   +LS R      K   +D +W++A+ +++  LD +       ++     GE AF
Sbjct: 414 NLTEYRFRLSLRDPEDKEKYFDNDQMWENAQTMLRAALDEMG------VDYFEAEGEAAF 467

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K A+G++    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF
Sbjct: 468 YGPKLDIQVKTALGKEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMIHRGVISTMERF 527

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
             I+IEN+KG  P WL+P Q  +  ++    V+YA E+A  L+   +  + D RNE + +
Sbjct: 528 TAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAKKLRDRGVRADVDERNEKMQF 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR     KIP  +I GDKE  + ++ +RR+G   TQ VS+ D +  +  +
Sbjct: 588 KIRASQTSKIPYQLIVGDKEMEDGTVNVRRYGQKETQTVSVDDFVQAILAD 638


>gi|148244740|ref|YP_001219434.1| threonyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA]
 gi|166225515|sp|A5CWF9|SYT_VESOH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|146326567|dbj|BAF61710.1| threonyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA]
          Length = 636

 Score =  657 bits (1694), Expect = 0.0,   Method: Composition-based stats.
 Identities = 295/642 (45%), Positives = 436/642 (67%), Gaps = 17/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDG+ K F    +   VA+S+   L K A+A  ++G++   S  ++ + ++ IIT  
Sbjct: 4   ITLPDGTKKIFEQVVSVEQVAKSM--GLVKAALAGEVDGELVSTSFLIKTDANLTIITAN 61

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D + L +IRHS AH++A+A Q ++P+ QV IGP+I++GFYYDF  +  F   +L +IEK 
Sbjct: 62  DDQGLEIIRHSTAHLLAQATQMLYPDAQVTIGPVIDNGFYYDFAYKNGFLEGDLIKIEKN 121

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M +++ ++    K  +S ++  + F+ K E YKV+I+ESI   + ++LY+QG++ DLCRG
Sbjct: 122 MHKLVKQNLKIEKFEMSRDETLQFFKDKGEYYKVKIIESISTDQILSLYKQGDFIDLCRG 181

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV ST ++K F KLMK+AGAYWRGDS+  ML R+YGTAW  +Q+L  YL+ LEE  +RD
Sbjct: 182 PHVPSTAKLKNF-KLMKLAGAYWRGDSSNEMLQRVYGTAWGNEQDLKVYLHKLEEVARRD 240

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHL 304
           HRK+ +  DLFHI E+  G++FWH KGW ++Q +  YMR   + + Y+E++TPQ++D+ L
Sbjct: 241 HRKIGKTQDLFHIQEETPGMVFWHAKGWILYQLVEQYMRGIFRDNGYQEVHTPQLIDKSL 300

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHWD +   MF     D      R +A+KPMNCP H+ ++N GLKSYR LP+RLAE
Sbjct: 301 WEKSGHWDKFGDVMFTTTSGD------RDYAVKPMNCPAHIQIYNQGLKSYRNLPLRLAE 354

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNEPSG+LHG+MRVR F QDD H+FCT EQ+ +E     +L  ++YK FGFEKI 
Sbjct: 355 FGSCHRNEPSGTLHGIMRVRNFVQDDGHIFCTPEQIQDEVSTFIDLTFNVYKYFGFEKIN 414

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +KLSTRP+KRVGSD +WD +E  +   L+         I   +  GEGAFYGPK E+ILK
Sbjct: 415 IKLSTRPKKRVGSDEVWDKSEIALVEALNA------KNIVWELQEGEGAFYGPKIEFILK 468

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D + R WQCGT+QVDF++P R  A +++ +S K  PV++HRA+ GS+ERF+GI+IE+++G
Sbjct: 469 DCLDRQWQCGTLQVDFSMPKRLGAQFIDENSVKKTPVILHRAIMGSLERFLGILIEHYEG 528

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P WLSPIQA++  I+    ++  +I   LK   L + +D RNE +++KIREHS+++ P
Sbjct: 529 AYPCWLSPIQAVIINISEKHAKFIVDIVKKLKKQGLRVISDLRNEKVSFKIREHSLQRYP 588

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
            I++ GD+E  +  + +R+ G      +S+   I  + +E+L
Sbjct: 589 YILVVGDREMEKGQVSVRQRGGKDLGAMSVGTFIKKVNQETL 630


>gi|312132188|ref|YP_003999528.1| ser-tRNA(thr) hydrolase; threonyl-tRNA synthetase [Leadbetterella
           byssophila DSM 17132]
 gi|311908734|gb|ADQ19175.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Leadbetterella
           byssophila DSM 17132]
          Length = 650

 Score =  657 bits (1694), Expect = 0.0,   Method: Composition-based stats.
 Identities = 269/649 (41%), Positives = 403/649 (62%), Gaps = 19/649 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEII 62
           +IK+T PDGSI+ F    T   VA SIS  LA+  +A  +NGKV D + P+ E  ++ ++
Sbjct: 2   EIKVTLPDGSIREFEQGTTPYQVALSISEGLARNVLAAKVNGKVVDANTPLTEDVTLSLL 61

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQ 121
           T  D    +   HS AH+MAEA+++++P V+  +GP +E+GFYYD D   +P SSD+  +
Sbjct: 62  TWNDAEGKSTFWHSSAHLMAEALEALYPGVKFWVGPPVENGFYYDVDTNGKPISSDDFKK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE KM E+  + + +++  +S   A + FE K + YK+++LE +     +TLYRQG + D
Sbjct: 122 IEDKMLELARQKNEYVRIPISKADALKYFEEKGDEYKLDLLEGL-EDGQITLYRQGNFTD 180

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ +TG +K   K+M  A AY++GD N  ML+R+YG  +   +EL +YL+ LEE+
Sbjct: 181 LCRGPHIPNTGFIKA-AKIMNAAAAYFKGDQNNKMLTRVYGVTFPKAKELEEYLHLLEEA 239

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           ++RDHRKL  E+++F  +E    G+  W  KG  + + L ++++R +++  Y  + TP +
Sbjct: 240 KRRDHRKLGAELEIFTFSEKVGKGLPLWLPKGAMLRERLENFLKRAQLRSGYLPVVTPHI 299

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             + L+  SGHWD Y  + F       T ++   F LKPMNCP H  +F    +SYR+LP
Sbjct: 300 GSKQLYVTSGHWDKYGEDSFQ---PIKTPEEGEEFMLKPMNCPHHCEIFKSKPRSYRDLP 356

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +RLAEFG+VYR E SG LHGL RVRGFTQDDAH+FC  +Q+ +E  K+ +L++ ++K  G
Sbjct: 357 LRLAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCANDQVEDEFKKVIDLVLYVFKSLG 416

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           F+    ++S R      K +GSD  WD AE  +         +++  + T V  GE AFY
Sbjct: 417 FDDYSAQVSLRSLENRSKYIGSDEDWDKAEKAIVNA------AAEKGLKTVVEYGEAAFY 470

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDA+GR WQ GTIQVD+NLP RF+  YV S ++K  PVMIHRA FGS+ERFI
Sbjct: 471 GPKLDFMVKDALGRKWQLGTIQVDYNLPKRFDLEYVGSDNQKHRPVMIHRAPFGSMERFI 530

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            I++EN  GN P WLSP Q  V  I+    ++A E+  +L+ + +    D R E I+ KI
Sbjct: 531 AILLENTAGNFPFWLSPEQIAVLPISEKYEDFANEVFLILQENDIRGYIDHRAEKISRKI 590

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R+  + K+P+++I G+KE  E  + +R+ G       S+ + I     E
Sbjct: 591 RDAEVAKVPLMLIVGEKEQEEGRVSVRKKGEGDLGSFSVQEFIEFAKNE 639


>gi|71903081|ref|YP_279884.1| threonyl-tRNA synthetase [Streptococcus pyogenes MGAS6180]
 gi|123734122|sp|Q48US7|SYT_STRPM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|71802176|gb|AAX71529.1| threonyl-tRNA synthetase [Streptococcus pyogenes MGAS6180]
          Length = 647

 Score =  657 bits (1694), Expect = 0.0,   Method: Composition-based stats.
 Identities = 270/660 (40%), Positives = 408/660 (61%), Gaps = 26/660 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            IK+TFPDG+++ F    T  D+AESIS+SLAKKA+A   N ++ D +  +  +GSIEI+
Sbjct: 1   MIKITFPDGAVREFESGVTTFDIAESISKSLAKKALAGKFNDQLIDTTRAIEEDGSIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQ 121
           TP+   +  V+RHS AH+ A+A + ++P + + +GP I +GFYYD D  E   S+++L +
Sbjct: 61  TPDHKDAYEVLRHSAAHLFAQAAKRLFPNLHLGVGPAIAEGFYYDTDNAEGQISNEDLPR 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE +MQ+I+  + P +++ ++ E+A ELF+   + YKVE++    A   +T+YRQGE+ D
Sbjct: 121 IEAEMQKIVTENYPCIREEVTKEEALELFK--DDPYKVELINE-HAGAGLTVYRQGEFVD 177

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ RIYGTAW  +++L  YL  LEE+
Sbjct: 178 LCRGPHVPSTGRIQVFHLL-NVAGAYWRGNSDNNMMQRIYGTAWFDKKDLKAYLTRLEEA 236

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+++   G+ FW   G  I +TL  Y+  +++   Y+ + TP +
Sbjct: 237 KERDHRKLGKELDLFMISQEVGQGLPFWLPDGATIRRTLERYITDKELASGYQHVYTPPL 296

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHWD Y+ +MF V        D   F L+PMNCP H+ V+ + ++SYRELP
Sbjct: 297 ASVELYKTSGHWDHYQEDMFPVMDMG----DGEEFVLRPMNCPHHIQVYKNHVRSYRELP 352

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  T +D H+F T EQ+  E  +   LII +Y DF 
Sbjct: 353 IRIAELGMMHRYEKSGALSGLQRVREMTLNDGHIFVTPEQIQEEFQRALQLIIDVYADFN 412

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R          +D +W++A++++K  LD +       ++     GE AFY
Sbjct: 413 LTDYRFRLSYRDPNDTRKYYDNDEMWENAQSMLKAALDEMG------VDYFEAEGEAAFY 466

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G +    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF 
Sbjct: 467 GPKLDIQVKTALGNEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMIHRGVISTMERFT 526

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IE +KG  P WL+P Q  V  I++   ++YA E+A  L+   +  + D RNE + YK
Sbjct: 527 AILIETYKGAFPTWLAPHQVTVIPISNEAHIDYAWEVAKTLRDRGVRADVDDRNEKMQYK 586

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLP---PDCQ 651
           IR     KIP  +I GDKE  ++S+ +RR+GS  T   S+ + +  +  +      PD Q
Sbjct: 587 IRASQTSKIPYQLIVGDKEMEDKSVNVRRYGSKATHTESVEEFVENILADIARKSCPDAQ 646


>gi|313674626|ref|YP_004052622.1| ser-tRNA(thr) hydrolase; threonyl-tRNA synthetase [Marivirga
           tractuosa DSM 4126]
 gi|312941324|gb|ADR20514.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Marivirga
           tractuosa DSM 4126]
          Length = 654

 Score =  656 bits (1693), Expect = 0.0,   Method: Composition-based stats.
 Identities = 269/647 (41%), Positives = 408/647 (63%), Gaps = 18/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
           M + IK+T PDGS+K F    TG D+A SIS  LA+  ++  +NG+V D + P+ E + I
Sbjct: 1   MSNKIKITLPDGSVKEFDKGVTGHDIAMSISEGLARNVLSTKVNGQVWDSTRPINEDAHI 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDE 118
           +++T  DP       HS AH++AEA++ ++P ++  IGP I +GFYYD D  ++    +E
Sbjct: 61  QLLTWNDPEGQNTFWHSSAHLLAEALEDMYPGIKFGIGPPIANGFYYDVDFGDKELQGEE 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L +IE+KM E+  + + + +  +S ++A E ++ K + YK+E++E +   E +T Y+QG 
Sbjct: 121 LEKIEQKMLELARQKNEYKRSEISKKEATEYYQKKGDEYKLELIEGLNDGE-ITFYQQGN 179

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + DLCRGPH+  TG +K   KL+ +AGAYWRGD  R  L+RIYG  +  Q+EL +YL  L
Sbjct: 180 FTDLCRGPHIPHTGYIK-AVKLLNIAGAYWRGDEKRKQLTRIYGITFPKQKELKEYLELL 238

Query: 239 EESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINT 296
           EE++KRDHRKL +EM+LF  +E    G+  W  KG  +   L +++++ ++K  Y+ + T
Sbjct: 239 EEAKKRDHRKLGKEMELFAFSEKVGLGLPLWLPKGTMLRDRLENFLKKAQVKAGYQPVIT 298

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCA--DDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
           P + ++ L+  SGH++ Y  + F    A  DD  K    + LKPMNCP H  ++    +S
Sbjct: 299 PHIGNKELYITSGHYEKYGKDSFRPIAAPSDDDSKSDEEYLLKPMNCPHHCEIYKTKPRS 358

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           Y++LP+RLAEFG+VYR E SG LHGL RVR FTQDDAH+FC  +Q+  E +K+ +L++ +
Sbjct: 359 YKDLPLRLAEFGTVYRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKEEFIKVIDLVLFV 418

Query: 415 YKDFGFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
           +   GFE  + ++S R        +G D +WD AE  +    +      +  + T + LG
Sbjct: 419 FNSLGFEDFVTQVSLRDPDNREKYIGGDEVWDKAEKSIIEAAE------EKGLKTVIELG 472

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           E AFYGPK ++++KDA+GR WQ GTIQVD+NLP RF   YV + + K  PVMIHRA FGS
Sbjct: 473 EAAFYGPKLDFMVKDALGRSWQLGTIQVDYNLPERFKLEYVGADNSKHRPVMIHRAPFGS 532

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
           +ERF+ ++IE+  GN PLWLSP Q  V  I+    +YA ++ + L+++ ++   D R+E 
Sbjct: 533 MERFVAVLIEHCAGNFPLWLSPEQVAVLPISEKYADYANKVYSELEANDITGFIDHRDEK 592

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
           I  KIR+  I KIP ++I G++EA+E  + IR+ G      +SL D 
Sbjct: 593 IGRKIRDAEINKIPYMLIVGEQEAAEEKVSIRKHGEGDVGNMSLEDF 639


>gi|324991486|gb|EGC23419.1| threonine--tRNA ligase [Streptococcus sanguinis SK353]
          Length = 647

 Score =  656 bits (1693), Expect = 0.0,   Method: Composition-based stats.
 Identities = 256/651 (39%), Positives = 407/651 (62%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  +  +GSIEI+
Sbjct: 1   MIKITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGSIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQ 121
           TP+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D      S+++L +
Sbjct: 61  TPDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNTAGQISNEDLPR 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWF 180
           IE++M++I+  + P +++ ++ ++ARE+F+   + YK+E++E     E  +T+YRQGE+ 
Sbjct: 121 IEEEMKKIVKENFPSIREEVTKDEAREIFK--NDPYKLELIEEHSEDEGGLTIYRQGEYV 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ R+YGTAW  +++L +YL   EE
Sbjct: 179 DLCRGPHVPSTGRIQIFHLL-NVAGAYWRGNSDNAMMQRVYGTAWFDKKDLKKYLQMREE 237

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           +++RDHRKL +E+DLF I+++   G+ FW   G  + + L  Y+  +++   Y+ + TP 
Sbjct: 238 AKERDHRKLGKELDLFMISQEVGQGLPFWLPNGATVRRELERYIVDKELASGYQHVYTPP 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L++ SGHW+ Y+ +MF          D   F L+PMNCP H+ V+ H + SYREL
Sbjct: 298 LASVELYKTSGHWEHYQEDMFPTMDMG----DGEEFVLRPMNCPHHIQVYKHHVHSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y DF
Sbjct: 354 PIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYADF 413

Query: 419 GFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
              +   +LS R      K   +D +W++A+ +++  LD +       ++     GE AF
Sbjct: 414 NLTEYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAF 467

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K A+G +    TIQ+DF LP RF+  YV +  E+  PVMIHR V  ++ERF
Sbjct: 468 YGPKLDIQVKTALGNEETLSTIQLDFLLPERFDLKYVGADGEEHRPVMIHRGVISTMERF 527

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINY 593
             I+IEN+KG  P WL+P Q  +  +++   ++YA ++A  L+   +  + D RNE + Y
Sbjct: 528 TAILIENYKGAFPTWLAPHQVTLIPVSNEAHIDYAWQVAKKLRDKGVRADVDERNEKMQY 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR     KIP  +I GDKE  + ++ +RR+G   T  + + + +  +  +
Sbjct: 588 KIRASQTSKIPYQLIVGDKEVEDGTVNVRRYGQKETHTIPVDEFVEQILAD 638


>gi|167626332|ref|YP_001676832.1| threonyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|189083609|sp|B0TY89|SYT_FRAP2 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|167596333|gb|ABZ86331.1| threonyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
          Length = 635

 Score =  656 bits (1693), Expect = 0.0,   Method: Composition-based stats.
 Identities = 300/643 (46%), Positives = 423/643 (65%), Gaps = 15/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            I + FPDGSI+ F        +A+SIS SLAK  V   I+ K+ D  D +  +  + +I
Sbjct: 1   MINIKFPDGSIREFESGVNSLQIAKSISPSLAKITVGAYIDNKLSDAKDVINHDCELRLI 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   L ++RHSCAH++A AV+ ++P  +V IGP+I++GFYYDF  ++     +LA I
Sbjct: 61  TTKDTEGLEILRHSCAHLLANAVKELYPNTEVTIGPVIDNGFYYDFSFKETIGEADLANI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M+EI  + S    + +S E A   F+++ E YKV+I+ESIPA + + +Y QG++ DL
Sbjct: 121 EKRMKEIAKKGSSISYKVVSKEDAIAFFKAQGENYKVDIIESIPADQQIKIYTQGDFSDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV ST  +K F KL K+AGAYWRGDSN  ML+RIYGT W T+++L QYL+ LEE+E
Sbjct: 181 CRGPHVPSTAAIKAF-KLTKLAGAYWRGDSNNEMLTRIYGTCWATKEDLDQYLHMLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KRDHRK+ + +DLFH  ED  G+ FWH  G +I++ +  YMR    K    EI TP + D
Sbjct: 240 KRDHRKIGKALDLFHFQEDSPGIAFWHDNGVRIWREVEDYMRASNKKYGCGEIRTPLIAD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             LW++SGH   Y  NMFA K       + R FA++PMNCP  V V+N  L SYR+LP+R
Sbjct: 300 FSLWEKSGHASKYAENMFATK------SENRDFAIRPMNCPTCVQVYNTKLHSYRDLPIR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AEFG V+RNEPSGSLHGLMRVR FTQDD H+FC  EQ+  E + +      +YKDFGF 
Sbjct: 354 MAEFGIVHRNEPSGSLHGLMRVRSFTQDDGHIFCAPEQVEEEVILMVKQCFEVYKDFGFN 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              VK++ RPE R+G+D  WD +E ++K  LD       + +   +L GEGAFYGPK E+
Sbjct: 414 DFTVKIALRPENRIGNDETWDKSEQMLKNALDA------NNVAYELLPGEGAFYGPKIEF 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            LKDAIGR WQCGTIQ+DF++P R  A Y++ +  K  PVM+HRA+ GS+ERFIG++IE+
Sbjct: 468 HLKDAIGRSWQCGTIQLDFSMPDRLGATYIDKNGNKQVPVMLHRAIVGSLERFIGMLIEH 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + GN+PLWL+P+Q  V  I++   EY Q++   L+ + +  + D RNE I +KIREH++ 
Sbjct: 528 YAGNMPLWLTPVQVAVMGISNHQDEYCQKVFETLEKNGIRAKLDLRNEKIGFKIREHTLL 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           ++P ++I G  E  +  + +R+       ++S+ D    L ++
Sbjct: 588 RVPYLVILGKSEQEQEIVTVRKHNGEDLGQMSIGDFCAFLNEQ 630


>gi|324993844|gb|EGC25763.1| threonine--tRNA ligase [Streptococcus sanguinis SK405]
 gi|324994835|gb|EGC26748.1| threonine--tRNA ligase [Streptococcus sanguinis SK678]
 gi|325687276|gb|EGD29298.1| threonine--tRNA ligase [Streptococcus sanguinis SK72]
 gi|325696135|gb|EGD38026.1| threonine--tRNA ligase [Streptococcus sanguinis SK160]
 gi|327474719|gb|EGF20124.1| threonine--tRNA ligase [Streptococcus sanguinis SK408]
          Length = 647

 Score =  656 bits (1693), Expect = 0.0,   Method: Composition-based stats.
 Identities = 256/651 (39%), Positives = 409/651 (62%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  +  +G+IEI+
Sbjct: 1   MIKITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGTIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQ 121
           TP+   +L ++RHS AH+ A+A + ++P++ + +GP I+DGFYYD D E    S+++L +
Sbjct: 61  TPDHEDALDILRHSAAHLFAQAARRLFPDIHLGVGPAIQDGFYYDTDNEAGQISNEDLPR 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWF 180
           IE++M++I+  + P +++ ++ ++ARE+F+   + YK+E++E     E  +T+YRQGE+ 
Sbjct: 121 IEEEMKKIVKENFPSIREEVTKDEAREIFK--NDPYKLELIEEHSEDEGGLTIYRQGEYV 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ R+YGTAW  +++L +YL   EE
Sbjct: 179 DLCRGPHVPSTGRIQIFHLL-NVAGAYWRGNSDNAMMQRVYGTAWFDKKDLKKYLQMREE 237

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           +++RDHRKL +E+DLF I+++   G+ FW   G  + + L  Y+  +++   Y+ + TP 
Sbjct: 238 AKERDHRKLGKELDLFMISQEVGQGLPFWLPNGATVRRELERYIVDKELASGYQHVYTPP 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L++ SGHW+ Y+ +MF          D   F L+PMNCP H+ V+ H + SYREL
Sbjct: 298 LASVELYKTSGHWEHYQEDMFPTMDMG----DGEEFVLRPMNCPHHIQVYKHHVHSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y DF
Sbjct: 354 PIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYADF 413

Query: 419 GFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
              +   +LS R      K   +D +W++A+ +++  LD +       ++     GE AF
Sbjct: 414 NLTEYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAF 467

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K A+G +    TIQ+DF LP RF+  YV +  E+  PVMIHR V  ++ERF
Sbjct: 468 YGPKLDIQVKTALGNEETLSTIQLDFLLPERFDLKYVGADGEEHRPVMIHRGVISTMERF 527

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINY 593
             I+IEN+KG  P WL+P Q  +  +++   ++YA ++A  L+   +  + D RNE + Y
Sbjct: 528 TAILIENYKGAFPTWLAPHQVTLIPVSNEAHIDYAWQVAKKLRDKGVRADVDERNEKMQY 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR     KIP  +I GDKEA + ++ +RR+G   T  + + + +  +  +
Sbjct: 588 KIRASQTSKIPYQLIVGDKEAEDGTVNVRRYGQKETHTIPVDEFVEQILAD 638


>gi|257091083|ref|ZP_05585444.1| threonyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|256999895|gb|EEU86415.1| threonyl-tRNA synthetase [Enterococcus faecalis CH188]
          Length = 645

 Score =  656 bits (1693), Expect = 0.0,   Method: Composition-based stats.
 Identities = 259/651 (39%), Positives = 402/651 (61%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +TFPDG++K F    T  DVA+SIS SLAKKA+A   NG + DL  P+  +GS+EI+
Sbjct: 2   SIHITFPDGAVKPFDSGVTTFDVAKSISNSLAKKALAGKFNGVLIDLDRPIVEDGSLEIV 61

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
           TP+   +L ++RHS AH+MA A++ ++P ++  +GP I+ GFYYD D  E P ++++L  
Sbjct: 62  TPDHEDALGILRHSSAHLMANALRRLFPNIKFGVGPAIDSGFYYDTDNGESPVTAEDLPA 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE +M +I+  ++P +++ +S  +A EL     + YKVE++  +P  E +T+Y QG++ D
Sbjct: 122 IEAEMMKIVKENNPIVRKEISRAEALEL--FADDPYKVELITDLPEDEIITVYDQGDFVD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG HV STG+++ F KL+ VAGAYWRG+S+  M+ RIYGTA+  +++L +++   EE+
Sbjct: 180 LCRGVHVPSTGRIQVF-KLLSVAGAYWRGNSDNHMMQRIYGTAFFDKKDLKEFIKMREEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF ++++ GSG+ FW  KG  I +T+  Y+  ++I+  Y+ + TP +
Sbjct: 239 KERDHRKLGKELDLFMVSQEVGSGLPFWLPKGATIRRTIERYIVDKEIRLGYQHVYTPIM 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            D  L++ SGHWD Y  +MF          D     L+PMNCP H+ V+ + + SYRELP
Sbjct: 299 ADVELYKTSGHWDHYHEDMFPPMDMG----DGEMLVLRPMNCPHHMMVYKNDIHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  +   L++++Y DF 
Sbjct: 355 IRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVAVYADFN 414

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R           DA+W+ A+ ++K  +D ++      ++     GE AFY
Sbjct: 415 ITDYRFRLSYRDPNNTDKYFDDDAMWEKAQAMLKAAMDELE------LDYFEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK-CHPVMIHRAVFGSIERF 534
           GPK +  +K A+G +    TIQ+DF LP RF+  YV    E    PV+IHR +  ++ERF
Sbjct: 469 GPKLDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTMERF 528

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           +  + E +KG  P WL+PIQA +  ++  +  EYA EI   L++  L +E D RNE + Y
Sbjct: 529 VAYLTEVYKGAFPTWLAPIQATIIPVSVEAHSEYAYEIKERLQAQGLRVEVDDRNEKMGY 588

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR    +K+P  ++ GDKE  + ++ +RR+GS  T    L   I  +  E
Sbjct: 589 KIRASQTQKVPYQLVVGDKEMEDATVNVRRYGSKETSVEDLSIFIDSMAAE 639


>gi|332367135|gb|EGJ44871.1| threonine--tRNA ligase [Streptococcus sanguinis SK1059]
          Length = 647

 Score =  656 bits (1693), Expect = 0.0,   Method: Composition-based stats.
 Identities = 255/651 (39%), Positives = 408/651 (62%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  +  +G+IEI+
Sbjct: 1   MIKITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGAIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQ 121
           TP+   +L ++RHS AH+ A+A + ++P++ + +GP I+DGFYYD D E    S+++L +
Sbjct: 61  TPDHEDALDILRHSAAHLFAQAARRLFPDIHLGVGPAIQDGFYYDTDNEAGQISNEDLPR 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWF 180
           IE++M++I+  + P +++ ++ ++ARE+F+   + YK+E++E     E  +T+YRQGE+ 
Sbjct: 121 IEEEMKKIVKENFPSIREEVTKDEAREIFK--NDPYKLELIEEHSEDEGGLTIYRQGEYV 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ R+YGTAW  +++L +YL   EE
Sbjct: 179 DLCRGPHVPSTGRIQIFHLL-NVAGAYWRGNSDNAMMQRVYGTAWFDKKDLKKYLQMREE 237

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           +++RDHRKL +E+DLF I+++   G+ FW   G  + + L  Y+  +++   Y+ + TP 
Sbjct: 238 AKERDHRKLGKELDLFMISQEVGQGLPFWLPNGATVRRELERYIVDKELASGYQHVYTPP 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L++ SGHW+ Y+ +MF          D   F L+PMNCP H+ V+ H + SYREL
Sbjct: 298 LASVELYKTSGHWEHYQEDMFPTMDMG----DGEEFVLRPMNCPHHIQVYKHHVHSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y DF
Sbjct: 354 PIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYADF 413

Query: 419 GFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
              +   +LS R      K   +D +W++A+ +++  LD +       ++     GE AF
Sbjct: 414 NLTEYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAF 467

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K A+G +    TIQ+DF LP RF+  YV +  E+  PVMIHR V  ++ERF
Sbjct: 468 YGPKLDIQVKTALGNEETLSTIQLDFLLPERFDLKYVGADGEEHRPVMIHRGVISTMERF 527

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINY 593
             I+IEN+KG  P WL+P Q  +  +++   ++YA ++A  L+   +  + D RNE + Y
Sbjct: 528 TAILIENYKGAFPTWLAPHQVTLIPVSNEAHIDYAWQVAKKLRDKGVRADVDERNEKMQY 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR     KIP  +I GDKE  + ++ +RR+G   T  + + + +  +  +
Sbjct: 588 KIRASQTSKIPYQLIVGDKEVEDGTVNVRRYGQKETHTIPVDEFVEQILAD 638


>gi|225857248|ref|YP_002738759.1| threonyl-tRNA synthetase [Streptococcus pneumoniae P1031]
 gi|254783542|sp|C1CLX1|SYT_STRZP RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|225725171|gb|ACO21023.1| threonyl-tRNA synthetase [Streptococcus pneumoniae P1031]
          Length = 647

 Score =  656 bits (1693), Expect = 0.0,   Method: Composition-based stats.
 Identities = 264/651 (40%), Positives = 406/651 (62%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  +  +GSIEI+
Sbjct: 1   MINITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGSIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQ 121
           TP+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D      S+++L +
Sbjct: 61  TPDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNTAGQISNEDLPR 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWF 180
           IE++MQ+I+  + P +++ ++ ++ARE+F+   + YK+E++E     E  +T+YRQGE+ 
Sbjct: 121 IEEEMQKIVKENFPSIREEVTKDEAREIFK--NDPYKLELIEEHSEDEGGLTIYRQGEYV 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ RIYGTAW  +++L  YL   EE
Sbjct: 179 DLCRGPHVPSTGRIQIFHLLH-VAGAYWRGNSDNAMMQRIYGTAWFDKKDLKNYLQMREE 237

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           +++RDHRKL +E+DLF I+++   G+ FW   G  I + L  Y+  +++   Y+ + TP 
Sbjct: 238 AKERDHRKLGKELDLFIISQEVGQGLPFWLPNGATIRRELERYIVNKELASGYQHVYTPP 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L++ SGHWD Y+ +MF          D   F L+PMNCP H+ VF H + SYREL
Sbjct: 298 LASVELYKTSGHWDHYQEDMFPTMDMG----DGEEFVLRPMNCPHHIQVFKHHVHSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y+DF
Sbjct: 354 PIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYEDF 413

Query: 419 GFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
                  +LS R      K   +D +W++A+ +++  LD +       +N     GE AF
Sbjct: 414 NLTDYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VNYFEAEGEAAF 467

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K A+G++    TIQ+DF LP RF+  Y+ +  E   PVMIHR V  ++ERF
Sbjct: 468 YGPKLDIQIKTALGKEETLSTIQLDFLLPERFDLKYIGADGEDHRPVMIHRGVISTMERF 527

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
             I+IEN+KG  P WL+P Q  +  ++    V+YA E+A  L+   +  + D RNE + +
Sbjct: 528 TAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAKKLRDRGVRADVDERNEKMQF 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR     KIP  +I GDKE  + ++ +RR+G   TQ VS+ + +  +  +
Sbjct: 588 KIRASQTSKIPYQLIVGDKEMEDETVNVRRYGQKETQTVSVDNFVQAILAD 638


>gi|197103889|ref|YP_002129266.1| threonyl-tRNA synthetase [Phenylobacterium zucineum HLK1]
 gi|238690165|sp|B4RE95|SYT_PHEZH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|196477309|gb|ACG76837.1| threonyl-tRNA synthetase [Phenylobacterium zucineum HLK1]
          Length = 658

 Score =  656 bits (1693), Expect = 0.0,   Method: Composition-based stats.
 Identities = 331/651 (50%), Positives = 451/651 (69%), Gaps = 13/651 (1%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEII 62
            I+L FPDGS + FP   TG ++A  IS+SL KKA+ V ++G++ DL  P+ +G + +I+
Sbjct: 1   MIELVFPDGSKREFPDGVTGREIAAGISKSLEKKAILVEVDGELLDLERPLEKGGAFKIL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T E P +L  IRH  +HI+AEAVQ ++P  QV IGP IEDGFYYDF +E+PFS D+LA+I
Sbjct: 61  TREAPEALETIRHDVSHILAEAVQELFPGTQVTIGPAIEDGFYYDFAREEPFSLDDLAKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E++M+EI+ RD P  ++    ++A   F    E YK +I+E+IPA E +T+YRQG+W DL
Sbjct: 121 EQRMKEIVDRDEPIRREEWDRDEAIRHFREIGEEYKAQIIEAIPAGEKITVYRQGQWKDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ ST    K FKL K+AGAYWRGD     L RIYGTAW ++ +L  Y+  LEE+E
Sbjct: 181 CRGPHLPSTRHAGKAFKLTKLAGAYWRGDHRNAQLQRIYGTAWASEADLEAYIQRLEEAE 240

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL R+MDLFH+ E+G G++FWH KG  +++T+ SY+RR++ +  Y+E+ TPQVLD
Sbjct: 241 KRDHRKLGRQMDLFHMQEEGKGMVFWHEKGLTLWRTVESYVRRRLDEAGYQEVRTPQVLD 300

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           +  W++SGHWD YR NMF         ++    +LKPMNCPGHV +F  G KSYR+LP+R
Sbjct: 301 RVFWEKSGHWDKYRPNMFVC-----ETEEGEELSLKPMNCPGHVQIFKFGQKSYRDLPLR 355

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AEFG+ +R EPSG+LHGLMRVR FTQDDAH+FC ++Q+  E  +   L  SI+ DFG E
Sbjct: 356 MAEFGACHRYEPSGALHGLMRVRAFTQDDAHIFCREDQIEEETARFIELANSIHADFGLE 415

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
           +  + L+TRPE R GSD  WD AE  M      +  + +  +   +  G+GAFY PK ++
Sbjct: 416 RDHIALATRPEVRAGSDEFWDKAEAQM------LAAARKAGVEPVIAEGDGAFYAPKLDW 469

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
           +LKD+IGR W CGTIQ+D+ LP R  A YV     K  PVM+HRA+ GS+ERFIG++IEN
Sbjct: 470 VLKDSIGRTWTCGTIQLDYVLPERLGAEYVAEDGSKQRPVMLHRAICGSLERFIGVLIEN 529

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  PLWL+P+Q +V TITS A +YA+  A  LK+  L +E D RNE INYK+REHS+ 
Sbjct: 530 YAGAFPLWLAPVQVVVATITSDADDYARAAAAELKAKGLRVELDLRNEKINYKVREHSLA 589

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           K+P+I + G +EA E  + +RR GS   Q ++L +A   L  E+LPPD  +
Sbjct: 590 KVPVIAVVGRREAEEGKVALRRLGSDGQQILALGEAAEALAMEALPPDLAR 640


>gi|327463110|gb|EGF09431.1| threonine--tRNA ligase [Streptococcus sanguinis SK1]
          Length = 647

 Score =  656 bits (1693), Expect = 0.0,   Method: Composition-based stats.
 Identities = 256/651 (39%), Positives = 407/651 (62%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+TFPDG+++ F    +  ++A+SIS SLAKKA+A   NGK+ D +  +  +GSIEI+
Sbjct: 1   MIKITFPDGAVREFESGVSTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGSIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQ 121
           TP+   +L ++RHS AH+ A+A + ++P++ + +GP I+DGFYYD D E    S+++L  
Sbjct: 61  TPDHEDALDILRHSAAHLFAQAARRLFPDIHLGVGPAIQDGFYYDTDNEAGQISNEDLPL 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWF 180
           IE++M++I+  + P +++ +S ++ARE+F+   + YK+E++E     E  +T+YRQGE+ 
Sbjct: 121 IEEEMKKIVKENFPSIREEVSKDEAREIFK--NDPYKLELIEEHSEDEGGLTIYRQGEYV 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ R+YGTAW  +++L +YL   EE
Sbjct: 179 DLCRGPHVPSTGRIQIFHLL-NVAGAYWRGNSDNAMMQRVYGTAWFDKKDLKKYLQMREE 237

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           +++RDHRKL +E+DLF I+++   G+ FW   G  + + L  Y+  +++   Y+ + TP 
Sbjct: 238 AKERDHRKLGKELDLFMISQEVGQGLPFWLPNGATVRRELERYIVDKELASGYQHVYTPP 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L++ SGHW+ Y+ +MF          D   F L+PMNCP H+ V+ H + SYREL
Sbjct: 298 LASVELYKTSGHWEHYQEDMFPTMDMG----DGEEFVLRPMNCPHHIQVYKHHVHSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y DF
Sbjct: 354 PIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYADF 413

Query: 419 GFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
              +   +LS R      K   +D +W++A+ +++  LD +       ++     GE AF
Sbjct: 414 NLTEYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAF 467

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K A+G +    TIQ+DF LP RF+  YV +  E+  PVMIHR V  ++ERF
Sbjct: 468 YGPKLDIQVKTALGNEETLSTIQLDFLLPERFDLKYVGADGEEHRPVMIHRGVISTMERF 527

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINY 593
             I+IEN+KG  P WL+P Q  +  +++   ++YA ++A  L+   +  + D RNE + Y
Sbjct: 528 TAILIENYKGAFPTWLAPHQVTLIPVSNEAHIDYAWQVAKKLRDKGVRADVDERNEKMQY 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR     KIP  +I GDKE  + ++ +RR+G   T  + + + +  +  +
Sbjct: 588 KIRASQTSKIPYQLIVGDKEVEDGTVNVRRYGQKETHTIPVDEFVEQILAD 638


>gi|306825714|ref|ZP_07459053.1| threonine--tRNA ligase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|304432075|gb|EFM35052.1| threonine--tRNA ligase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
          Length = 647

 Score =  656 bits (1693), Expect = 0.0,   Method: Composition-based stats.
 Identities = 265/651 (40%), Positives = 407/651 (62%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  +  +GSIEI+
Sbjct: 1   MIKITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGSIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQ 121
           TP+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D      S+++L +
Sbjct: 61  TPDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNTAGQISNEDLPR 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWF 180
           IE++M++I+  + P +++ ++ ++ARE+F+   + YK+E++E     E  +T+YRQGE+ 
Sbjct: 121 IEEEMKKIVKENFPSIREEVTKDEAREIFK--NDPYKLELIEEHSEDEGGLTIYRQGEYV 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ RIYGTAW  +++L  YL   EE
Sbjct: 179 DLCRGPHVPSTGRIQIFHLL-NVAGAYWRGNSDNAMMQRIYGTAWFDKKDLKNYLQMREE 237

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           +++RDHRKL +E+DLF I+++   G+ FW   G  I + L  Y+  ++I   Y+ + TP 
Sbjct: 238 AKERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVDKEIAAGYQHVYTPP 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L++ SGHWD YR +MF          D   F L+PMNCP H+ V+ H + SYREL
Sbjct: 298 IASVELYKTSGHWDHYREDMFPTMDMG----DGEEFVLRPMNCPHHIEVYKHHVHSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  + +D H F   EQ+  E  KI  LII +Y+DF
Sbjct: 354 PIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHTFVAPEQIEEEFKKILQLIIDVYEDF 413

Query: 419 GFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
                  +LS R      K   +D +W++A+ ++K  +D ++      ++     GE AF
Sbjct: 414 NLTDYRFRLSYRDPEDKHKYFDNDEMWENAQRMLKAAMDDME------LDYFEAEGEAAF 467

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K A+G++    TIQ+DF LP RF+  YV +  E+  PVMIHR V  ++ERF
Sbjct: 468 YGPKLDIQVKTALGKEETLSTIQLDFLLPERFDLKYVGADGEEHRPVMIHRGVISTMERF 527

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
             I+IEN+KG  P WL+P Q  +  ++    V+YA E+A  L+   +  + D RNE + +
Sbjct: 528 TAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAKKLRDRGVRADVDERNEKMQF 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR     KIP  +I GDKE  + ++ +RR+G   TQ V + + +  +  +
Sbjct: 588 KIRASQTSKIPYQLIVGDKEMEDGTVNVRRYGQKETQTVPVDEFVAAILAD 638


>gi|77919019|ref|YP_356834.1| threonyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
 gi|123770467|sp|Q3A4P3|SYT_PELCD RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|77545102|gb|ABA88664.1| Ser-tRNA(Thr) hydrolase [Pelobacter carbinolicus DSM 2380]
          Length = 638

 Score =  656 bits (1693), Expect = 0.0,   Method: Composition-based stats.
 Identities = 281/647 (43%), Positives = 411/647 (63%), Gaps = 20/647 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEII 62
            I++  PDGSIK F    T  D+A  I   LA++AVA   N ++ DL  P+ E G +EII
Sbjct: 3   MIQIELPDGSIKEFSETTTPGDIAAGIGSGLARQAVAARFNDRMVDLCTPITESGRLEII 62

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFD-KEQPFSSDELA 120
           T   P+ L V RH+ AH+MA AV+ ++ + VQV IGP +E+GFYYDF  ++  FS D+  
Sbjct: 63  TLNSPQGLEVYRHTAAHLMAHAVKDLYGDRVQVTIGPAVENGFYYDFYCEDHAFSPDDFE 122

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IEK+MQE++  + P  ++ +S + A  LF    E YKVE++E + A   V+LYRQG++ 
Sbjct: 123 KIEKRMQELVKANLPIEREEVSRDSAIALFRELGEHYKVELIEDLDA-PTVSLYRQGDFV 181

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ STG++K F KL  VAGAYWRG     ML RIY TA+  ++EL  YL  LEE
Sbjct: 182 DLCRGPHLPSTGRIKAF-KLTSVAGAYWRGSEKNAMLQRIYATAFPDKKELRTYLNKLEE 240

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQ 298
           + KRDHR++ RE+DLF  +E+   G++ WH KG  +   L  + RR+ ++  Y+ +  PQ
Sbjct: 241 ARKRDHRRIGRELDLFSFSEEAGAGLVIWHPKGALLRTLLEDFERREHLRRGYDIVMGPQ 300

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L   LW+ SGH+D+YR NM+       T  D + + +KPMNC  H+ ++    +SYR+L
Sbjct: 301 ILRTDLWKTSGHFDNYRENMYF------TDVDGQGYGIKPMNCLAHMLIYKARQRSYRDL 354

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R  E G+V+R+E SG LHGL+RVRGFTQDDAH+ CT +Q+  E  ++   +  +   F
Sbjct: 355 PLRYFELGTVHRHEKSGVLHGLLRVRGFTQDDAHIICTPDQLDEEIKRVLEFVRDVMAIF 414

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE  + ++STRPEK +GSDA W+ A   +   L  ++      +   V  G+GAFYGPK
Sbjct: 415 GFEYEI-EISTRPEKSIGSDADWERATGALMNALKDLE------LPHDVNEGDGAFYGPK 467

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +  LKDA+ R WQC TIQ DF LP RF+  YV    EK  PVM+HR + G+IERFIG++
Sbjct: 468 IDIKLKDALDRRWQCATIQCDFTLPERFDLTYVGKDGEKHRPVMLHRVILGAIERFIGVL 527

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE++ GN PLWL+P+QA+V  +T +  +YA+ +++ L++  + ++ D RNE + +KIRE 
Sbjct: 528 IEHYAGNFPLWLAPVQAVVINVTDNQADYAKSVSDALRAAGVRVQCDLRNEKLGFKIREA 587

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
            + KIP +++ GD E S+ ++  R       + +S  D    + +E 
Sbjct: 588 QVDKIPYMLVVGDTEMSDGTVAPRFRSGKNLEPMSPEDFARFVQEEC 634


>gi|327461002|gb|EGF07335.1| threonine--tRNA ligase [Streptococcus sanguinis SK1057]
          Length = 647

 Score =  656 bits (1693), Expect = 0.0,   Method: Composition-based stats.
 Identities = 255/651 (39%), Positives = 408/651 (62%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  +  +G+IEI+
Sbjct: 1   MIKITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGAIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQ 121
           TP+   +L ++RHS AH+ A+A + ++P++ + +GP I+DGFYYD D E    S+++L +
Sbjct: 61  TPDHEDALDILRHSAAHLFAQAARRLFPDIHLGVGPAIQDGFYYDTDNEAGQISNEDLPR 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWF 180
           IE++M++I+  + P +++ ++ ++ARE+F+   + YK+E++E     E  +T+YRQGE+ 
Sbjct: 121 IEEEMKKIVKENFPSIREEVTKDEAREIFK--NDPYKLELIEEHSEDEGGLTIYRQGEYV 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ R+YGTAW  +++L +YL   EE
Sbjct: 179 DLCRGPHVPSTGRIQIFHLL-NVAGAYWRGNSDNAMMQRVYGTAWFDKKDLKKYLQMREE 237

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           +++RDHRKL +E+DLF I+++   G+ FW   G  + + L  Y+  +++   Y+ + TP 
Sbjct: 238 AKERDHRKLGKELDLFMISQEVGQGLPFWLPNGATVRRELERYIVDKELASGYQHVYTPP 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L++ SGHW+ Y+ +MF          D   F L+PMNCP H+ V+ H + SYREL
Sbjct: 298 LASVELYKTSGHWEHYQEDMFPTMDMG----DGEEFVLRPMNCPHHIQVYKHHVHSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y DF
Sbjct: 354 PIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYADF 413

Query: 419 GFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
              +   +LS R      K   +D +W++A+ +++  LD +       ++     GE AF
Sbjct: 414 NLTEYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAF 467

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K A+G +    TIQ+DF LP RF+  YV +  E+  PVMIHR V  ++ERF
Sbjct: 468 YGPKLDIQVKTALGNEETLSTIQLDFLLPERFDLKYVGADGEEHRPVMIHRGVISTMERF 527

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINY 593
             I+IEN+KG  P WL+P Q  +  +++   ++YA ++A  L+   +  + D RNE + Y
Sbjct: 528 TAILIENYKGAFPTWLAPHQVTLIPVSNEAHIDYAWQVAKKLRDKGVRADVDERNEKMQY 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR     KIP  +I GDKE  + ++ +RR+G   T  + + + +  +  +
Sbjct: 588 KIRASQTSKIPYQLIVGDKEVEDGTVNVRRYGQKETHTIPVDEFVEQILAD 638


>gi|294779531|ref|ZP_06744926.1| threonine--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|300861074|ref|ZP_07107161.1| threonine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|307268336|ref|ZP_07549717.1| threonyl-tRNA synthetase [Enterococcus faecalis TX4248]
 gi|307276154|ref|ZP_07557285.1| threonyl-tRNA synthetase [Enterococcus faecalis TX2134]
 gi|294453410|gb|EFG21817.1| threonine--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|300850113|gb|EFK77863.1| threonine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|306507148|gb|EFM76287.1| threonyl-tRNA synthetase [Enterococcus faecalis TX2134]
 gi|306515362|gb|EFM83896.1| threonyl-tRNA synthetase [Enterococcus faecalis TX4248]
 gi|315036305|gb|EFT48237.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0027]
          Length = 660

 Score =  656 bits (1693), Expect = 0.0,   Method: Composition-based stats.
 Identities = 259/651 (39%), Positives = 401/651 (61%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +TFPDG++K F    T  DVA+SIS SLAKKA+A   NG + DL  P+  +GS+EI+
Sbjct: 17  SIHITFPDGAVKPFDSGVTTFDVAKSISNSLAKKALAGKFNGVLIDLDRPIAEDGSLEIV 76

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
           TP+   +L ++RHS AH+MA A++ ++P ++  +GP I+ GFYYD D  E P ++++L  
Sbjct: 77  TPDHEDALGILRHSSAHLMANALRRLFPNIKFGVGPAIDSGFYYDTDNGESPVTAEDLPA 136

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE +M +I+  ++P +++ +S  +A EL     + YKVE++  +P  E +T+Y QG++ D
Sbjct: 137 IEAEMMKIVKENNPIVRKEISRAEALEL--FADDPYKVELITDLPEDEIITVYDQGDFVD 194

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG HV STG+++ F KL+ VAGAYWRG+S+  M+ RIYGTA+  +++L +++   EE+
Sbjct: 195 LCRGVHVPSTGRIQVF-KLLSVAGAYWRGNSDNHMMQRIYGTAFFDKKDLKEFIKMREEA 253

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF ++++ GSG+ FW  KG  I +T+  Y+  ++I   Y+ + TP +
Sbjct: 254 KERDHRKLGKELDLFMVSQEVGSGLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIM 313

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            D  L++ SGHWD Y  +MF          D     L+PMNCP H+ V+ + + SYRELP
Sbjct: 314 ADVELYKTSGHWDHYHEDMFPPMDMG----DGEMLVLRPMNCPHHMMVYKNDIHSYRELP 369

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  +   L++++Y DF 
Sbjct: 370 IRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVAVYADFN 429

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R           DA+W+ A+ ++K  +D ++      ++     GE AFY
Sbjct: 430 ITDYRFRLSYRDPNNTDKYFDDDAMWEKAQAMLKAAMDELE------LDYFEAEGEAAFY 483

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK-CHPVMIHRAVFGSIERF 534
           GPK +  +K A+G +    TIQ+DF LP RF+  YV    E    PV+IHR +  ++ERF
Sbjct: 484 GPKLDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTMERF 543

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           +  + E +KG  P WL+PIQA +  ++  +  EYA EI   L++  L +E D RNE + Y
Sbjct: 544 VAYLTEVYKGAFPTWLAPIQATIIPVSVEAHSEYAYEIKERLQAQGLRVEVDDRNEKMGY 603

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR    +K+P  ++ GDKE  + ++ +RR+GS  T    L   I  +  E
Sbjct: 604 KIRASQTQKVPYQLVVGDKEMEDATVNVRRYGSKETSVEDLSIFIDSMAAE 654


>gi|227519418|ref|ZP_03949467.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0104]
 gi|307280591|ref|ZP_07561639.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0860]
 gi|227073125|gb|EEI11088.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0104]
 gi|306503957|gb|EFM73174.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0860]
 gi|315145737|gb|EFT89753.1| threonyl-tRNA synthetase [Enterococcus faecalis TX2141]
 gi|315151718|gb|EFT95734.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0012]
 gi|315173904|gb|EFU17921.1| threonyl-tRNA synthetase [Enterococcus faecalis TX1346]
          Length = 660

 Score =  656 bits (1693), Expect = 0.0,   Method: Composition-based stats.
 Identities = 259/651 (39%), Positives = 401/651 (61%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +TFPDG++K F    T  DVA+SIS SLAKKA+A   NG + DL  P+  +GS+EI+
Sbjct: 17  SIHITFPDGAVKPFDSGVTTFDVAKSISNSLAKKALAGKFNGVLIDLDRPIVEDGSLEIV 76

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
           TP+   +L ++RHS AH+MA A++ ++P ++  +GP I+ GFYYD D  E P ++++L  
Sbjct: 77  TPDHEDALGILRHSSAHLMANALRRLFPNIKFGVGPAIDSGFYYDTDNGESPVTAEDLPA 136

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE +M +I+  ++P +++ +S  +A EL     + YKVE++  +P  E +T+Y QG++ D
Sbjct: 137 IEAEMMKIVKENNPIVRKEISRAEALEL--FADDPYKVELITDLPEDEIITVYDQGDFVD 194

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG HV STG+++ F KL+ VAGAYWRG+S+  M+ RIYGTA+  +++L +++   EE+
Sbjct: 195 LCRGVHVPSTGRIQVF-KLLSVAGAYWRGNSDNHMMQRIYGTAFFDKKDLKEFIKMREEA 253

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF ++++ GSG+ FW  KG  I +T+  Y+  ++I   Y+ + TP +
Sbjct: 254 KERDHRKLGKELDLFMVSQEVGSGLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIM 313

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            D  L++ SGHWD Y  +MF          D     L+PMNCP H+ V+ + + SYRELP
Sbjct: 314 ADVELYKTSGHWDHYHEDMFPPMDMG----DGEMLVLRPMNCPHHMMVYKNDIHSYRELP 369

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  +   L++++Y DF 
Sbjct: 370 IRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVAVYADFN 429

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R           DA+W+ A+ ++K  +D ++      ++     GE AFY
Sbjct: 430 ITDYRFRLSYRDPNNTDKYFDDDAMWEKAQAMLKAAMDELE------LDYFEAEGEAAFY 483

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK-CHPVMIHRAVFGSIERF 534
           GPK +  +K A+G +    TIQ+DF LP RF+  YV    E    PV+IHR +  ++ERF
Sbjct: 484 GPKLDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTMERF 543

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           +  + E +KG  P WL+PIQA +  ++  +  EYA EI   L++  L +E D RNE + Y
Sbjct: 544 VAYLTEVYKGAFPTWLAPIQATIIPVSVEAHSEYAYEIKERLQAQGLRVEVDDRNEKMGY 603

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR    +K+P  ++ GDKE  + ++ +RR+GS  T    L   I  +  E
Sbjct: 604 KIRASQTQKVPYQLVVGDKEMEDATVNVRRYGSKETSVEDLSIFIDSMAAE 654


>gi|257087763|ref|ZP_05582124.1| threonyl-tRNA synthetase [Enterococcus faecalis D6]
 gi|256995793|gb|EEU83095.1| threonyl-tRNA synthetase [Enterococcus faecalis D6]
          Length = 645

 Score =  656 bits (1692), Expect = 0.0,   Method: Composition-based stats.
 Identities = 259/651 (39%), Positives = 401/651 (61%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +TFPDG++K F    T  DVA+SIS SLAKKA+A   NG + DL  P+  +GS+EI+
Sbjct: 2   SIHITFPDGAVKPFDSGITTFDVAKSISNSLAKKALAGKFNGVLIDLDRPIVEDGSLEIV 61

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
           TP+   +L ++RHS AH+MA A++ ++P ++  +GP I+ GFYYD D  E P ++++L  
Sbjct: 62  TPDHEDALGILRHSAAHLMANALRRLFPNIKFGVGPAIDSGFYYDTDNGESPVTAEDLPA 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE +M +I+  ++P +++ +S  +A EL     + YKVE++  +P  E +T+Y QG++ D
Sbjct: 122 IEAEMMKIVKENNPIVRKEISRAEALEL--FADDPYKVELITDLPEDEIITVYDQGDFVD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG HV STG+++ F KL+ VAGAYWRG+S+  M+ RIYGTA+  +++L +++   EE+
Sbjct: 180 LCRGVHVPSTGRIQVF-KLLSVAGAYWRGNSDNHMMQRIYGTAFFDKKDLKEFIKMREEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF ++++ GSG+ FW  KG  I +T+  Y+  ++I   Y+ + TP +
Sbjct: 239 KERDHRKLGKELDLFMVSQEVGSGLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIM 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            D  L++ SGHWD Y  +MF          D     L+PMNCP H+ V+ + + SYRELP
Sbjct: 299 ADVELYKTSGHWDHYHEDMFPPMDMG----DGEMLVLRPMNCPHHMMVYKNDIHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  +   L++++Y DF 
Sbjct: 355 IRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVAVYADFN 414

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R           DA+W+ A+ ++K  +D ++      ++     GE AFY
Sbjct: 415 ITDYRFRLSYRDPNNTDKYFDDDAMWEKAQAMLKAAMDELE------LDYFEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK-CHPVMIHRAVFGSIERF 534
           GPK +  +K A+G +    TIQ+DF LP RF+  YV    E    PV+IHR +  ++ERF
Sbjct: 469 GPKLDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTMERF 528

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           +  + E +KG  P WL+PIQA +  ++  +  EYA EI   L++  L +E D RNE + Y
Sbjct: 529 VAYLTEVYKGAFPTWLAPIQATIIPVSVEAHSEYAYEIKERLQAQGLRVEVDDRNEKMGY 588

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR    +K+P  ++ GDKE  + ++ +RR+GS  T    L   I  +  E
Sbjct: 589 KIRASQTQKVPYQLVVGDKEMEDATVNVRRYGSKETSVEDLSIFIDSMAAE 639


>gi|94993836|ref|YP_601934.1| threonyl-tRNA synthetase [Streptococcus pyogenes MGAS10750]
 gi|123080137|sp|Q1J7X1|SYT_STRPF RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|94547344|gb|ABF37390.1| Threonyl-tRNA synthetase [Streptococcus pyogenes MGAS10750]
          Length = 647

 Score =  656 bits (1692), Expect = 0.0,   Method: Composition-based stats.
 Identities = 271/660 (41%), Positives = 409/660 (61%), Gaps = 26/660 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            IK+TFPDG+++ F    T  D+AESIS+SLAKKA+A   N ++ D +  +  +GSIEI+
Sbjct: 1   MIKITFPDGAVREFESGVTTFDIAESISKSLAKKALAGKFNDQLIDTTRAIEEDGSIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQ 121
           TP+   +  V+RHS AH+ A+A + ++P + + +GP I +GFYYD D  E   S+++L +
Sbjct: 61  TPDHKDAYEVLRHSAAHLFAQAAKRLFPNLHLGVGPAIAEGFYYDTDNAEGQISNEDLPR 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE +MQ+I+  + P +++ ++ E+A ELF+   + YKVE++    A   +T+YRQGE+ D
Sbjct: 121 IEAEMQKIVTENYPCIREEVTKEEALELFK--DDPYKVELINE-HAGAGLTVYRQGEFVD 177

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ RIYGTAW  +++L  YL  LEE+
Sbjct: 178 LCRGPHVPSTGRIQVFHLL-NVAGAYWRGNSDNNMMQRIYGTAWFDKKDLKAYLTRLEEA 236

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+++   G+ FW   G  I +TL  Y+  +++   Y+ + TP +
Sbjct: 237 KERDHRKLGKELDLFMISQEVGQGLPFWLPDGATIRRTLERYITDKELASGYQHVYTPPL 296

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHWD Y+ +MF V        D   F L+PMNCP H+ V+ + ++SYRELP
Sbjct: 297 ASVELYKTSGHWDHYQEDMFPVMDMG----DGEEFVLRPMNCPHHIQVYKNHVRSYRELP 352

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  T +D H+F T EQ+  E  +   LII +Y DF 
Sbjct: 353 IRIAELGMMHRYEKSGALSGLQRVREMTLNDGHIFVTPEQIQEEFRRALQLIIDVYADFN 412

Query: 420 FEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R      K   +D +W++A++++K  LD +       ++     GE AFY
Sbjct: 413 LTDYRFRLSYRDPNDTHKYYDNDEMWENAQSMLKAALDEMG------VDYFEAEGEAAFY 466

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G +    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF 
Sbjct: 467 GPKLDIQVKTALGNEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMIHRGVISTMERFT 526

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IE +KG  P WL+P Q  V  I++   ++YA E+A  L+   +  + D RNE + YK
Sbjct: 527 AILIETYKGAFPTWLAPHQVTVIPISNEAHIDYAWEVAKTLRDRGVRADVDDRNEKMQYK 586

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE---SLPPDCQ 651
           IR     KIP  +I GDKE  ++S+ +RR+GS  T   S+ + +  +  +      PD Q
Sbjct: 587 IRASQTSKIPYQLIVGDKEMEDKSVNVRRYGSKATHTESVEEFVENILADIARKSRPDAQ 646


>gi|332358962|gb|EGJ36783.1| threonine--tRNA ligase [Streptococcus sanguinis SK49]
          Length = 647

 Score =  656 bits (1692), Expect = 0.0,   Method: Composition-based stats.
 Identities = 255/651 (39%), Positives = 409/651 (62%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  +  +G+IEI+
Sbjct: 1   MIKITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGAIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQ 121
           TP+   +L ++RHS AH+ A+A + ++P++ + +GP I+DGFYYD D +    S+++L +
Sbjct: 61  TPDHEDALDILRHSAAHLFAQAARRLFPDIHLGVGPAIQDGFYYDTDNQAGQISNEDLPR 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWF 180
           IE++M++I+  + P +++ ++ ++ARE+F+   + YK+E++E     E  +T+YRQGE+ 
Sbjct: 121 IEEEMKKIVKENFPSIREEVTKDEAREIFK--NDPYKLELIEEHSEDEGGLTIYRQGEYV 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ R+YGTAW  +++L +YL   EE
Sbjct: 179 DLCRGPHVPSTGRIQIFHLL-NVAGAYWRGNSDNAMMQRVYGTAWFDKKDLKKYLQMREE 237

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           +++RDHRKL +E+DLF I+++   G+ FW   G  + + L  Y+  +++   Y+ + TP 
Sbjct: 238 AKERDHRKLGKELDLFMISQEVGQGLPFWLPNGATVRRELERYIVDKELASGYQHVYTPP 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L++ SGHW+ Y+ +MF          D   F L+PMNCP H+ V+ H + SYREL
Sbjct: 298 LASVELYKTSGHWEHYQEDMFPTMDMG----DGEEFVLRPMNCPHHIQVYKHHVHSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y DF
Sbjct: 354 PIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYADF 413

Query: 419 GFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
              +   +LS R      K   +D +W++A+ +++  LD +       ++     GE AF
Sbjct: 414 NLTEYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAF 467

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K A+G +    TIQ+DF LP RF+  YV +  E+  PVMIHR V  ++ERF
Sbjct: 468 YGPKLDIQVKTALGNEETLSTIQLDFLLPERFDLKYVGADGEEHRPVMIHRGVISTMERF 527

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINY 593
             I+IEN+KG  P WL+P Q  +  +++   ++YA ++A  L+   +  + D RNE + Y
Sbjct: 528 TAILIENYKGAFPTWLAPHQVTLIPVSNEAHIDYAWQVAKKLRDKGVRADVDERNEKMQY 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR     KIP  +I GDKE  + ++ +RR+G   T  +S+ + +  +  +
Sbjct: 588 KIRASQTSKIPYQLIVGDKEVEDGTVNVRRYGQKETHTISVDEFVEQILAD 638


>gi|332362439|gb|EGJ40239.1| threonine--tRNA ligase [Streptococcus sanguinis SK1056]
          Length = 654

 Score =  656 bits (1692), Expect = 0.0,   Method: Composition-based stats.
 Identities = 256/652 (39%), Positives = 409/652 (62%), Gaps = 23/652 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
           + IK+TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  +  +GSIEI
Sbjct: 7   NMIKITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGSIEI 66

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELA 120
           +TP+   +L ++RHS AH+ A+A + ++P++ + +GP I+DGFYYD D E    S+++L 
Sbjct: 67  VTPDHEDALDILRHSAAHLFAQAARRLFPDIHLGVGPAIQDGFYYDTDNEAGQISNEDLP 126

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEW 179
           +IE++M++I+  + P +++ ++ ++ARE+F+   + YK+E++E     E  +T+YRQGE+
Sbjct: 127 RIEEEMKKIVKENFPSIREEVTKDEAREIFK--NDPYKLELIEEHSEDEGGLTIYRQGEY 184

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ R+YGTAW  +++L +YL   E
Sbjct: 185 VDLCRGPHVPSTGRIQIFHLL-NVAGAYWRGNSDNAMMQRVYGTAWFDKKDLKKYLQMRE 243

Query: 240 ESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTP 297
           E+++RDHRKL +E+DLF I+++   G+ FW   G  + + L  Y+  +++   Y+ + TP
Sbjct: 244 EAKERDHRKLGKELDLFMISQEVGQGLPFWLPNGATVRRELERYIVDKELASGYQHVYTP 303

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    L++ SGHW+ Y+ +MF          D   F L+PMNCP H+ V+ H + SYRE
Sbjct: 304 PLASVELYKTSGHWEHYQEDMFPTMDMG----DGEEFVLRPMNCPHHIQVYKHHVHSYRE 359

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y D
Sbjct: 360 LPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYAD 419

Query: 418 FGFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           F   +   +LS R      K   +D +W++A+ +++  LD +       ++     GE A
Sbjct: 420 FNLTEYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAA 473

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  +K A+G +    TIQ+DF LP RF+  YV +  E+  PVMIHR V  ++ER
Sbjct: 474 FYGPKLDIQVKTALGNEETLSTIQLDFLLPERFDLKYVGADGEEHRPVMIHRGVISTMER 533

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETIN 592
           F  I+IEN+KG  P WL+P Q  +  +++   ++YA ++A  L+   +  + D RNE + 
Sbjct: 534 FTAILIENYKGAFPTWLAPHQVTLIPVSNEAHIDYAWQVAKKLRDKGVRADVDERNEKMQ 593

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           YKIR     KIP  +I GDKE  + ++ +RR+G   T  + + + +  +  +
Sbjct: 594 YKIRASQTSKIPYQLIVGDKEVEDGTVNVRRYGQKETHTIPVDEFVEQILAD 645


>gi|88195489|ref|YP_500293.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|123003455|sp|Q2FXP7|SYT_STAA8 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|87203047|gb|ABD30857.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|329728437|gb|EGG64874.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus 21189]
          Length = 645

 Score =  656 bits (1692), Expect = 0.0,   Method: Composition-based stats.
 Identities = 267/650 (41%), Positives = 402/650 (61%), Gaps = 21/650 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
             I + FPDG+ K F    T  D+A+SIS  L KKAVA   NG++ DL+ P+  +GSIEI
Sbjct: 2   EQINIQFPDGNKKAFDKGTTTEDIAQSISPGLRKKAVAGKFNGQLVDLTKPLETDGSIEI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +TP    +L V+RHS AH+MA A++ ++  V+  +GP+IE GFYYDFD +Q  SSD+  Q
Sbjct: 62  VTPGSEEALEVLRHSTAHLMAHAIKRLYGNVKFGVGPVIEGGFYYDFDIDQNISSDDFEQ 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK M++I+  +    ++ +S ++ +EL     + YK+E++++IP  ENVTLY QG++ D
Sbjct: 122 IEKTMKQIVNENMKIERKVVSRDEVKEL--FSNDEYKLELIDAIPEDENVTLYSQGDFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG HV ST ++K+F KL+  AGAYWRGDSN  ML RIYGTA+  ++EL  +L  LEE 
Sbjct: 180 LCRGVHVPSTAKIKEF-KLLSTAGAYWRGDSNNKMLQRIYGTAFFDKKELKAHLQMLEER 238

Query: 242 EKRDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRK+ +E++LF +    G+G+  W   G  I + +  Y+  +++   Y+ + TP +
Sbjct: 239 KERDHRKIGKELELFTNSQLVGAGLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVL 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +  L++ SGHWD Y+ +MF     D+T     +  L+PMNCP H+ ++ +   SYRELP
Sbjct: 299 ANVDLYKTSGHWDHYQEDMFPPMQLDET----ESMVLRPMNCPHHMMIYANKPHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G+++R E SG++ GL RVRG T +D+H+F   +Q+  E  ++ N+II +YKDFG
Sbjct: 355 IRIAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVNMIIDVYKDFG 414

Query: 420 FEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           FE    +LS R      K    D +W+ AEN++K   D +  S ++ I      GE AFY
Sbjct: 415 FEDYSFRLSYRDPEDKEKYFDDDDMWNKAENMLKEAADELGLSYEEAI------GEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G++    T Q+DF LP RF+  Y+    E   PV+IHR V  ++ERF+
Sbjct: 469 GPKLDVQVKTAMGKEETLSTAQLDFLLPERFDLTYIGQDGEHHRPVVIHRGVVSTMERFV 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             + E  KG  P WL+P Q  +  +      +YA+++ + LKS  + +  D RNE + YK
Sbjct: 529 AFLTEETKGAFPTWLAPKQVQIIPVNVDLHYDYARQLQDELKSQGVRVSIDDRNEKMGYK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IRE  ++KIP  I+ GDKE     + +R++GS   + V   + I  L  E
Sbjct: 589 IREAQMQKIPYQIVVGDKEVENNQVNVRQYGSQDQETVEKDEFIWNLVDE 638


>gi|257420184|ref|ZP_05597178.1| threonyl-tRNA synthetase [Enterococcus faecalis T11]
 gi|257162012|gb|EEU91972.1| threonyl-tRNA synthetase [Enterococcus faecalis T11]
          Length = 645

 Score =  656 bits (1692), Expect = 0.0,   Method: Composition-based stats.
 Identities = 258/651 (39%), Positives = 401/651 (61%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +TFPDG++K F    T  DVA+SIS SLAKKA+A   NG + DL  P+  +GS+EI+
Sbjct: 2   SIHITFPDGAVKPFDSGVTTFDVAKSISNSLAKKALAGKFNGVLIDLDRPIVEDGSLEIV 61

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
           TP+   +L ++RHS AH+MA A++ ++P ++  +GP I+ GFYYD D  + P ++++L  
Sbjct: 62  TPDHEDALGILRHSSAHLMANALRRLFPNIKFGVGPAIDSGFYYDTDNGKSPVTAEDLPA 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE +M +I+  ++P +++ +S  +A EL     + YKVE++  +P  E +T+Y QG++ D
Sbjct: 122 IEAEMMKIVKENNPIVRKEISRAEALEL--FADDPYKVELITDLPEDEIITVYDQGDFVD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG HV STG+++ F KL+ VAGAYWRG+S+  M+ RIYGTA+  +++L +++   EE+
Sbjct: 180 LCRGVHVPSTGRIQVF-KLLSVAGAYWRGNSDNHMMQRIYGTAFFDKKDLKEFIKMREEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF ++++ GSG+ FW  KG  I +T+  Y+  ++I   Y+ + TP +
Sbjct: 239 KERDHRKLGKELDLFMVSQEVGSGLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIM 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            D  L++ SGHWD Y  +MF          D     L+PMNCP H+ V+ + + SYRELP
Sbjct: 299 ADVELYKTSGHWDHYHEDMFPPMDMG----DGEMLVLRPMNCPHHMMVYKNDIHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  +   L++++Y DF 
Sbjct: 355 IRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVAVYADFN 414

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R           DA+W+ A+ ++K  +D ++      ++     GE AFY
Sbjct: 415 ITDYRFRLSYRDPNNTDKYFDDDAMWEKAQAMLKAAMDELE------LDYFEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK-CHPVMIHRAVFGSIERF 534
           GPK +  +K A+G +    TIQ+DF LP RF+  YV    E    PV+IHR +  ++ERF
Sbjct: 469 GPKLDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTMERF 528

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           +  + E +KG  P WL+PIQA +  ++  +  EYA EI   L++  L +E D RNE + Y
Sbjct: 529 VAYLTEVYKGAFPTWLAPIQATIIPVSVEAHSEYAYEIKERLQAQGLRVEVDDRNEKMGY 588

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR    +K+P  ++ GDKE  + ++ +RR+GS  T    L   I  +  E
Sbjct: 589 KIRASQTQKVPYQLVVGDKEMEDATVNVRRYGSKETSVEDLSIFIDSMAAE 639


>gi|256960954|ref|ZP_05565125.1| threonyl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|256951450|gb|EEU68082.1| threonyl-tRNA synthetase [Enterococcus faecalis Merz96]
          Length = 645

 Score =  656 bits (1692), Expect = 0.0,   Method: Composition-based stats.
 Identities = 258/651 (39%), Positives = 400/651 (61%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +TFPDG++K F    T  DVA+SIS SLAKKA+A   NG + DL  P+  +GS+EI+
Sbjct: 2   SIHITFPDGAVKPFDSGVTTFDVAKSISNSLAKKALAGKFNGVLIDLDRPIVEDGSLEIV 61

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
           TP+   +L ++RHS AH+MA A++ ++P ++  +GP I+ GFYYD D  E P ++++   
Sbjct: 62  TPDHEDALGILRHSSAHLMANALRRLFPNIKFGVGPAIDSGFYYDTDNGESPVTAEDFPA 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE +M +I+  ++P +++ +S  +A EL     + YKVE++  +P  E +T+Y QG++ D
Sbjct: 122 IEAEMMKIVKENNPIVRKEISRAEALEL--FADDPYKVELITDLPEDEIITIYDQGDFVD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG HV STG+++ F KL+ VAGAYWRG+S+  M+ RIYGTA+  +++L +++   EE+
Sbjct: 180 LCRGVHVPSTGRIQVF-KLLSVAGAYWRGNSDNHMMQRIYGTAFFDKKDLKEFIKMREEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF ++++ GSG+ FW  KG  I +T+  Y+  ++I   Y+ + TP +
Sbjct: 239 KERDHRKLGKELDLFMVSQEVGSGLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIM 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            D  L++ SGHWD Y  +MF          D     L+PMNCP H+ V+ + + SYRELP
Sbjct: 299 ADVELYKTSGHWDHYHEDMFPPMDMG----DGEMLVLRPMNCPHHMMVYKNDIHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  +   L++++Y DF 
Sbjct: 355 IRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVAVYADFN 414

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R           DA+W+ A+ ++K  +D ++      ++     GE AFY
Sbjct: 415 ITDYRFRLSYRDPNNTDKYFDDDAMWEKAQAMLKAAMDELE------LDYFEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK-CHPVMIHRAVFGSIERF 534
           GPK +  +K A+G +    TIQ+DF LP RF+  YV    E    PV+IHR +  ++ERF
Sbjct: 469 GPKLDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTMERF 528

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           +  + E +KG  P WL+PIQA +  ++  +  EYA EI   L++  L +E D RNE + Y
Sbjct: 529 VAYLTEVYKGAFPTWLAPIQATIIPVSVEAHSEYAYEIKERLQAQGLRVEVDDRNEKMGY 588

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR    +K+P  ++ GDKE  + ++ +RR+GS  T    L   I  +  E
Sbjct: 589 KIRASQTQKVPYQLVVGDKEMEDATVNVRRYGSKETSVEDLSIFIDSMAAE 639


>gi|315148859|gb|EFT92875.1| threonyl-tRNA synthetase [Enterococcus faecalis TX4244]
          Length = 660

 Score =  656 bits (1692), Expect = 0.0,   Method: Composition-based stats.
 Identities = 259/651 (39%), Positives = 401/651 (61%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +TFPDG++K F    T  DVA+SIS SLAKKA+A   NG + DL  P+  +GS+EI+
Sbjct: 17  SIHITFPDGAVKPFDSGVTTFDVAKSISNSLAKKALAGKFNGVLIDLDRPIIEDGSLEIV 76

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
           TP+   +L ++RHS AH+MA A++ ++P ++  +GP I+ GFYYD D  E P ++++L  
Sbjct: 77  TPDHEDALGILRHSSAHLMANALRRLFPNIKFGVGPAIDSGFYYDTDNGESPVTAEDLPA 136

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE +M +I+  ++P +++ +S  +A EL     + YKVE++  +P  E +T+Y QG++ D
Sbjct: 137 IEAEMMKIVKENNPIVRKEISRAEALEL--FADDPYKVELITDLPEDEIITVYDQGDFVD 194

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG HV STG+++ F KL+ VAGAYWRG+S+  M+ RIYGTA+  +++L +++   EE+
Sbjct: 195 LCRGVHVPSTGRIQVF-KLLSVAGAYWRGNSDNHMMQRIYGTAFFDKKDLKEFIKMREEA 253

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF ++++ GSG+ FW  KG  I +T+  Y+  ++I   Y+ + TP +
Sbjct: 254 KERDHRKLGKELDLFMVSQEVGSGLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIM 313

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            D  L++ SGHWD Y  +MF          D     L+PMNCP H+ V+ + + SYRELP
Sbjct: 314 ADVELYKTSGHWDHYHEDMFPPMDMG----DGEMLVLRPMNCPHHMMVYKNDIHSYRELP 369

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  +   L++++Y DF 
Sbjct: 370 IRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVAVYADFN 429

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R           DA+W+ A+ ++K  +D ++      ++     GE AFY
Sbjct: 430 ITDYRFRLSYRDPNNTDKYFDDDAMWEKAQAMLKAAMDELE------LDYFEAEGEAAFY 483

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK-CHPVMIHRAVFGSIERF 534
           GPK +  +K A+G +    TIQ+DF LP RF+  YV    E    PV+IHR +  ++ERF
Sbjct: 484 GPKLDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTMERF 543

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           +  + E +KG  P WL+PIQA +  ++  +  EYA EI   L++  L +E D RNE + Y
Sbjct: 544 VAYLTEVYKGAFPTWLAPIQATIIPVSVEAHSEYAYEIKERLQAQGLRVEVDDRNEKMGY 603

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR    +K+P  ++ GDKE  + ++ +RR+GS  T    L   I  +  E
Sbjct: 604 KIRASQTQKVPYQLVVGDKEMEDATVNVRRYGSKETSVEDLSIFIDSMAAE 654


>gi|119505276|ref|ZP_01627351.1| threonyl-tRNA synthetase [marine gamma proteobacterium HTCC2080]
 gi|119458967|gb|EAW40067.1| threonyl-tRNA synthetase [marine gamma proteobacterium HTCC2080]
          Length = 639

 Score =  656 bits (1692), Expect = 0.0,   Method: Composition-based stats.
 Identities = 311/643 (48%), Positives = 430/643 (66%), Gaps = 18/643 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP    +  PDGS + F    + +DVA  I   LAK A+A  ++G+  D S  +  + ++
Sbjct: 1   MPV---INLPDGSQRTFEQPVSVADVAFDIGPGLAKAALAGVVDGREVDTSFVIDSDSAL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT  D   + +IRHS AH++A+AVQ ++P  QV IGP +E+GFYYDF     F+ ++L
Sbjct: 58  SIITERDEAGVEIIRHSTAHLLAQAVQQLFPGTQVTIGPTVENGFYYDFATGHNFTPEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IEK+M+E+ + D P  +   S E+A +LF +  E +KV+I+E +P  E +++Y+QGEW
Sbjct: 118 ERIEKRMEELASADLPVERVVYSREQAIDLFRNMGEHFKVQIIEDLPEGEEISIYKQGEW 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV +T ++K F KL KVAGAYWRGD+N  ML RIYGTAW  +++L  YL  + 
Sbjct: 178 MDLCRGPHVPTTSKIKAF-KLTKVAGAYWRGDANNQMLQRIYGTAWGNKKQLKAYLNRIA 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+EKRDHRK+A+++DLFH  E+  G++FWH  GW I+Q + SYMR++    DYEEI TPQ
Sbjct: 237 EAEKRDHRKIAKKLDLFHTQEEAPGMVFWHPAGWTIYQVIESYMRKQQLRFDYEEIKTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D  LWQ+SGH D + + MF +        D R FA+KPMNCP HV VFN GLKSYR+L
Sbjct: 297 VVDISLWQRSGHADKFASGMFTL------DADDRQFAVKPMNCPCHVQVFNQGLKSYRDL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFGS +RNEPSGSLHG+MRVRGFTQDDAH+FCT+ Q+ +E     +++  +Y DF
Sbjct: 351 PLRLAEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTEAQIQSEVATFIDMLHEVYADF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF +++ +LSTRP +RVGS+  WD      +      +      +N  +L GEGAFYGPK
Sbjct: 411 GFTEVIYRLSTRPAERVGSETDWD------RAEAALAEALDAKDLNWEMLPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD IGR WQ GTIQVDF++P R +A YV     +  PVM+HRAV GS ERFIGI+
Sbjct: 465 IEFSLKDCIGRVWQLGTIQVDFSMPGRLDAQYVAEDGSRQVPVMLHRAVLGSFERFIGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+++G  PLWL+  QAIV  IT     YAQ++A  LK     + TD RNE I +KIREH
Sbjct: 525 IEHYEGEFPLWLASQQAIVAPITDKQGAYAQQVAADLKEAGFRVGTDLRNEKIGFKIREH 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            + K+P++++ GDKE +  ++ +R         ++L   + ++
Sbjct: 585 ELAKVPLVLVVGDKEMAAGTVAVRGRHGADLGSLNLAALMQLM 627


>gi|328946743|gb|EGG40881.1| threonine--tRNA ligase [Streptococcus sanguinis SK1087]
          Length = 647

 Score =  656 bits (1692), Expect = 0.0,   Method: Composition-based stats.
 Identities = 255/651 (39%), Positives = 408/651 (62%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  +  +G+IEI+
Sbjct: 1   MIKITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGAIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQ 121
           TP+   +L ++RHS AH+ A+A + ++P++ + +GP I+DGFYYD D E    S+++L +
Sbjct: 61  TPDHEDALDILRHSAAHLFAQAARRLFPDIHLGVGPAIQDGFYYDTDNEAGQISNEDLPR 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWF 180
           IE++M++I+  + P +++ ++ ++ARE+F+   + YK+E++E     E  +T+YRQGE+ 
Sbjct: 121 IEEEMKKIVKENVPSIREEVTKDEAREIFK--NDPYKLELIEEHSEDEGGLTIYRQGEYV 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ R+YGTAW  +++L +YL   EE
Sbjct: 179 DLCRGPHVPSTGRIQIFHLL-NVAGAYWRGNSDNAMMQRVYGTAWFDKKDLKKYLQMREE 237

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           +++RDHRKL +E+DLF I+++   G+ FW   G  + + L  Y+  +++   Y+ + TP 
Sbjct: 238 AKERDHRKLGKELDLFMISQEVGQGLPFWLPNGATVRRELERYIVDKELASGYQHVYTPP 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L++ SGHW+ Y+ +MF          D   F L+PMNCP H+ V+ H + SYREL
Sbjct: 298 LASVELYKTSGHWEHYQEDMFPTMDMG----DGEEFVLRPMNCPHHIQVYKHHVHSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y DF
Sbjct: 354 PIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYADF 413

Query: 419 GFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
              +   +LS R      K   +D +W++A+ +++  LD +       ++     GE AF
Sbjct: 414 NLTEYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAF 467

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K A+G +    TIQ+DF LP RF+  YV +  E+  PVMIHR V  ++ERF
Sbjct: 468 YGPKLDIQVKTALGNEETLSTIQLDFLLPERFDLKYVGADGEEHRPVMIHRGVISTMERF 527

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINY 593
             I+IEN+KG  P WL+P Q  +  +++   ++YA ++A  L+   +  + D RNE + Y
Sbjct: 528 TAILIENYKGAFPTWLAPHQVTLIPVSNEAHIDYAWQVAKKLRDKGVRADVDERNEKMQY 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR     KIP  +I GDKE  + ++ +RR+G   T  + + + +  +  +
Sbjct: 588 KIRASQTSKIPYQLIVGDKEVEDGTVNVRRYGQKETHTIPVDEFVEQILAD 638


>gi|15924673|ref|NP_372207.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50]
 gi|15927261|ref|NP_374794.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus N315]
 gi|156980000|ref|YP_001442259.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
 gi|255006467|ref|ZP_05145068.2| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Mu50-omega]
 gi|54039693|sp|P67585|SYT_STAAN RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|54042050|sp|P67584|SYT_STAAM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|166225504|sp|A7X3A6|SYT_STAA1 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|13701479|dbj|BAB42773.1| threonyl-tRNA synthetase 1 [Staphylococcus aureus subsp. aureus
           N315]
 gi|14247455|dbj|BAB57845.1| threonyl-tRNA synthetase 1 [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|156722135|dbj|BAF78552.1| threonyl-tRNA synthetase 1 [Staphylococcus aureus subsp. aureus
           Mu3]
          Length = 645

 Score =  656 bits (1692), Expect = 0.0,   Method: Composition-based stats.
 Identities = 267/650 (41%), Positives = 402/650 (61%), Gaps = 21/650 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
             I + FPDG+ K F    T  D+A+SIS  L KKAVA   NG++ DL+ P+  +GSI I
Sbjct: 2   EQINIQFPDGNKKAFDKGTTTEDIAQSISPGLRKKAVAGKFNGQLVDLTKPLETDGSIGI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +TP    +L V+RHS AH+MA A++ ++  V+  +GP+IE GFYYDFD +Q  SSD+  Q
Sbjct: 62  VTPGSEEALEVLRHSTAHLMAHAIKRLYGNVKFGVGPVIEGGFYYDFDIDQNISSDDFEQ 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK M++I+  +    ++ +S ++A+EL     + YK+E++++IP  ENVTLY QG++ D
Sbjct: 122 IEKTMKQIVNENMKIERKVVSRDEAKEL--FSNDEYKLELIDAIPEDENVTLYSQGDFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG HV ST ++K+F KL+  AGAYWRGDSN  ML RIYGTA+  ++EL  +L  LEE 
Sbjct: 180 LCRGVHVPSTAKIKEF-KLLSTAGAYWRGDSNNKMLQRIYGTAFFDKKELKAHLQMLEER 238

Query: 242 EKRDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRK+ +E++LF +    G+G+  W   G  I + +  Y+  +++   Y+ + TP +
Sbjct: 239 KERDHRKIGKELELFTNSQLVGAGLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVL 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +  L++ SGHWD Y+ +MF     D+T     +  L+PMNCP H+ ++ +   SYRELP
Sbjct: 299 ANVDLYKTSGHWDHYQEDMFPPMQLDET----ESMVLRPMNCPHHMMIYANKPHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G+++R E SG++ GL RVRG T +D+H+F   +Q+  E  ++ N+II +YKDFG
Sbjct: 355 IRIAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVNMIIDVYKDFG 414

Query: 420 FEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           FE    +LS R      K    D +W+ AEN++K   D +  S ++ I      GE AFY
Sbjct: 415 FEDYSFRLSYRDPEDKEKYFDDDDMWNKAENMLKEAADELGLSYEEAI------GEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G++    T Q+DF LP RF+  Y+    E   PV+IHR V  ++ERF+
Sbjct: 469 GPKLDVQVKTAMGKEETLSTAQLDFLLPERFDLTYIGQDGEHHRPVVIHRGVVSTMERFV 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             + E  KG  P WL+P Q  +  +      +YA+++ + LKS  + +  D RNE + YK
Sbjct: 529 AFLTEETKGAFPTWLAPKQVQIIPVNVDLHYDYARQLQDELKSQGVRVSIDDRNEKMGYK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IRE  ++KIP  I+ GDKE     + +R++GS   + V   + I  L  E
Sbjct: 589 IREAQMQKIPYQIVVGDKEVENNQVNVRQYGSQDQETVEKDEFIWNLVDE 638


>gi|56707928|ref|YP_169824.1| threonyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110670399|ref|YP_666956.1| threonyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC198]
 gi|224457008|ref|ZP_03665481.1| threonyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|254370416|ref|ZP_04986421.1| hypothetical protein [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254874733|ref|ZP_05247443.1| threonyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|73919791|sp|Q5NGL8|SYT_FRATT RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|123063497|sp|Q14I20|SYT_FRAT1 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|56604420|emb|CAG45450.1| Threonyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110320732|emb|CAL08833.1| Threonyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC198]
 gi|151568659|gb|EDN34313.1| hypothetical protein FTBG_00181 [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254840732|gb|EET19168.1| threonyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|282159111|gb|ADA78502.1| Threonyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           NE061598]
          Length = 634

 Score =  656 bits (1692), Expect = 0.0,   Method: Composition-based stats.
 Identities = 299/643 (46%), Positives = 426/643 (66%), Gaps = 16/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            I + FPDGSI+ F       DVA+SIS SLAK  +A  I+ ++ D  D +     + +I
Sbjct: 1   MINIRFPDGSIREFEAGVNSLDVAKSISPSLAKATMAAYIDDQLKDAKDAINSNCELRLI 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +DP  L ++RHSCAH++A AV+ ++P  +V IGP++++GFYYDF  ++     +L  I
Sbjct: 61  TVKDPEGLEILRHSCAHLLAHAVKELYPNTEVTIGPVVDNGFYYDFSFKESIGEADLPTI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EKKM+E+  + +P   + +   +A E F+++ E YKVEI++SI A E + +Y Q  + DL
Sbjct: 121 EKKMKELAKKSAPISYRVVPKAEAIEFFKAQGENYKVEIIDSI-ADEQMKIYTQDNFSDL 179

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ +T  +K F KL K+AGAYWRG+S+  ML+RIYGT W T+++L QYL  LEE+E
Sbjct: 180 CRGPHIPNTSVLKAF-KLTKLAGAYWRGNSDNEMLTRIYGTCWATKEDLEQYLNMLEEAE 238

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KRDHRK+ + +DLFH  ED  G+ FWH  G +I++ +  YMR    K    EI TP + D
Sbjct: 239 KRDHRKIGKVLDLFHFQEDSPGIAFWHDNGVRIWRQVEDYMRASNNKYGCSEIRTPLIAD 298

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             LWQ+SGH   Y  NMFA K       + R FA++PMNCP  V V+N  L SYR+LP+R
Sbjct: 299 FSLWQKSGHASKYAENMFATK------SENRDFAIRPMNCPTCVQVYNTKLHSYRDLPIR 352

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AEFG V+RNEPSGSLHGL+RVR FTQDD H+FCT EQ+  E + +      +YKDFGF 
Sbjct: 353 MAEFGIVHRNEPSGSLHGLLRVRSFTQDDGHIFCTPEQVEEEVILMVQQCFEVYKDFGFN 412

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              VK++ RPE R+G D  WD +E ++K  LD       + ++  +L GEGAFYGPK E+
Sbjct: 413 DFAVKIALRPENRIGDDETWDKSEQMLKNALDA------NNVSYELLPGEGAFYGPKIEF 466

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            LKDAIGR WQCGTIQ+DF++P R  A Y++ + EK  PVM+HRA+ GS+ERFIG++IE+
Sbjct: 467 HLKDAIGRSWQCGTIQLDFSMPQRLGATYIDKNGEKQVPVMLHRAIVGSLERFIGMLIEH 526

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + GNLPLWL+P+Q  V  I+++  +Y +E+  +L+ + +  + D RNE I +KIREH++ 
Sbjct: 527 YAGNLPLWLAPVQVAVMGISNNQDDYCKEVFIMLEKNGIRAKLDLRNEKIGFKIREHTLL 586

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           ++P ++I G  E  ++ I IR+       ++S+ D    L K+
Sbjct: 587 RVPYLVILGKNEQEQKIITIRKHSGEDLGQMSVDDFCAFLDKQ 629


>gi|82751271|ref|YP_417012.1| threonyl-tRNA synthetase [Staphylococcus aureus RF122]
 gi|123768508|sp|Q2YTA7|SYT_STAAB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|82656802|emb|CAI81231.1| threonyl-tRNA synthetase 1 [Staphylococcus aureus RF122]
          Length = 645

 Score =  656 bits (1692), Expect = 0.0,   Method: Composition-based stats.
 Identities = 267/650 (41%), Positives = 402/650 (61%), Gaps = 21/650 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
             I + FPDG+ K F    T  D+A+SIS  L KKAVA   NG++ DL+ P+  +GSIEI
Sbjct: 2   EQINIQFPDGNKKAFDKGTTTEDIAQSISPGLRKKAVAGKFNGQLVDLTKPLETDGSIEI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +TP    +L V+RHS AH+MA A++ ++  V+  +GP+IE GFYYDFD +Q  SSD+  Q
Sbjct: 62  VTPVSEEALEVLRHSTAHLMAHAIKRLYGNVKFGVGPVIEGGFYYDFDIDQNISSDDFEQ 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK M++I+  +    ++ +S ++A+EL     + YK+E++++IP  ENVTLY QG++ D
Sbjct: 122 IEKTMKQIVNENMKIERKVVSRDEAKEL--FSNDEYKLELIDAIPEDENVTLYSQGDFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG HV ST ++K+F KL+  AGAYWRGDSN  ML RIYGTA+  ++EL  +L  LEE 
Sbjct: 180 LCRGVHVPSTAKIKEF-KLLSTAGAYWRGDSNNKMLQRIYGTAFFDKKELKAHLQMLEER 238

Query: 242 EKRDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRK+ +E++LF +    G+G+  W   G  I + +  Y+  +++   Y+ + TP +
Sbjct: 239 KERDHRKIGKELELFTNSQLVGAGLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVL 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +  L++ SGHWD Y+ +MF     D+T     +  L+PMNCP H+ ++ +   SYRELP
Sbjct: 299 ANVDLYKTSGHWDHYQEDMFPPMQLDET----ESMVLRPMNCPHHMMIYANKPHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G+++R E SG++ GL RVRG T +D+H+F   +Q+  E  ++ N+II +YKDFG
Sbjct: 355 IRIAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVNMIIDVYKDFG 414

Query: 420 FEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           FE    +LS R      K    D +W+ AEN++K   D +  S ++ I      GE AFY
Sbjct: 415 FEDYSFRLSYRDPEDKEKYFDDDDMWNKAENMLKEAADELGLSYEEAI------GEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G++    T Q+DF LP RF+  Y+    E   PV+IHR V  ++ERF+
Sbjct: 469 GPKLDVQVKTAMGKEETLSTAQLDFLLPERFDLTYIGQDGEHHRPVVIHRGVVSTMERFV 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             + E  KG  P WL+P Q  +  +      +YA+++ + LKS  + +  D RNE + YK
Sbjct: 529 AFLTEETKGAFPTWLAPKQVQIIPVNVDLHYDYARQLQDELKSQGVRVSIDDRNEKMGYK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IRE  ++K P  I+ GDKE     + +R++GS   + V   + I  L  E
Sbjct: 589 IREAQMQKTPYQIVVGDKEVENNQVNVRQYGSQDQETVEKDEFIWNLVDE 638


>gi|50913800|ref|YP_059772.1| threonyl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
 gi|68052904|sp|Q5XDC4|SYT_STRP6 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|50902874|gb|AAT86589.1| Threonyl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
          Length = 647

 Score =  656 bits (1692), Expect = 0.0,   Method: Composition-based stats.
 Identities = 270/660 (40%), Positives = 409/660 (61%), Gaps = 26/660 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            IK+TFPDG+++ F    T  D+AES+S+SLAKKA+A   N ++ D +  +  +GSIEI+
Sbjct: 1   MIKITFPDGAVREFESGVTTFDIAESLSKSLAKKALAGKFNDQLIDTTRAIEEDGSIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQ 121
           TP+   +  V+RHS AH+ A+A + ++P + + +GP I +GFYYD D  E   S+++L +
Sbjct: 61  TPDHKDAYEVLRHSAAHLFAQAAKRLFPNLHLGVGPAIAEGFYYDTDNAEGQISNEDLPR 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE +MQ+I+  + P +++ ++ E+A ELF+   + YKVE++    A   +T+YRQGE+ D
Sbjct: 121 IEAEMQKIVTENYPCIREEVTKEEALELFK--DDPYKVELINE-HAGAGLTVYRQGEFVD 177

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ RIYGTAW  +++L  YL  LEE+
Sbjct: 178 LCRGPHVPSTGRIQVFHLL-NVAGAYWRGNSDNNMMQRIYGTAWFDKKDLKAYLTRLEEA 236

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+++   G+ FW   G  I +TL  Y+  +++   Y+ + TP +
Sbjct: 237 KERDHRKLGKELDLFMISQEVGQGLPFWLPDGATIRRTLERYITDKELASGYQHVYTPPL 296

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHWD Y+ +MF V        D   F L+PMNCP H+ V+ + ++SYRELP
Sbjct: 297 ASVELYKTSGHWDHYQEDMFPVMDMG----DGEEFVLRPMNCPHHIQVYKNHVRSYRELP 352

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  T +D H+F T EQ+  E  +   LII +Y DF 
Sbjct: 353 IRIAELGMMHRYEKSGALSGLQRVREMTLNDGHIFVTPEQIQEEFQRALQLIIDVYADFN 412

Query: 420 FEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R      K   +D +W++A++++K  LD +       ++     GE AFY
Sbjct: 413 LTDYRFRLSYRDPNDTHKYYDNDEMWENAQSMLKAALDEMG------VDYFEAEGEAAFY 466

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G +    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF 
Sbjct: 467 GPKLDIQVKTALGNEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMIHRGVISTMERFT 526

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IE +KG  P WL+P Q  V  I++   ++YA E+A  L+   +  + D RNE + YK
Sbjct: 527 AILIETYKGAFPTWLAPHQVTVIPISNEAHIDYAWEVAKTLRDRGVRADVDDRNEKMQYK 586

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE---SLPPDCQ 651
           IR     KIP  +I GDKE  ++S+ +RR+GS  T   S+ + +  +  +      PD Q
Sbjct: 587 IRTSQTSKIPYQLIVGDKEMEDKSVNVRRYGSKATHTESVEEFVENILADIARKSRPDAQ 646


>gi|323351205|ref|ZP_08086861.1| threonine--tRNA ligase [Streptococcus sanguinis VMC66]
 gi|322122429|gb|EFX94140.1| threonine--tRNA ligase [Streptococcus sanguinis VMC66]
          Length = 647

 Score =  656 bits (1692), Expect = 0.0,   Method: Composition-based stats.
 Identities = 255/651 (39%), Positives = 408/651 (62%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  +  +G+IEI+
Sbjct: 1   MIKITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGAIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQ 121
           TP+   +L ++RHS AH+ A+A + ++P++ + +GP I+DGFYYD D E    S+++L +
Sbjct: 61  TPDHEDALDILRHSAAHLFAQAARRLFPDIHLGVGPAIQDGFYYDTDNEAGQISNEDLPR 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWF 180
           IE++M++I+  + P +++ ++ ++ARE+F+   + YK+E++E     E  +T+YRQGE+ 
Sbjct: 121 IEEEMKKIVKENFPSIREEVTKDQAREIFK--NDPYKLELIEEHSEDEGGLTIYRQGEYV 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ R+YGTAW  +++L +YL   EE
Sbjct: 179 DLCRGPHVPSTGRIQIFHLL-NVAGAYWRGNSDNAMMQRVYGTAWFDKKDLKKYLQMREE 237

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           +++RDHRKL +E+DLF I+++   G+ FW   G  + + L  Y+  +++   Y+ + TP 
Sbjct: 238 AKERDHRKLGKELDLFMISQEVGQGLPFWLPNGATVRRELERYIVDKELASGYQHVYTPP 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L++ SGHW+ Y+ +MF          D   F L+PMNCP H+ V+ H + SYREL
Sbjct: 298 LASVGLYKTSGHWEHYQEDMFPTMDMG----DGEEFVLRPMNCPHHIQVYKHHVHSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y DF
Sbjct: 354 PIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYADF 413

Query: 419 GFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
              +   +LS R      K   +D +W++A+ +++  LD +       ++     GE AF
Sbjct: 414 NLTEYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAF 467

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K A+G +    TIQ+DF LP RF+  YV +  E+  PVMIHR V  ++ERF
Sbjct: 468 YGPKLDIQVKTALGNEETLSTIQLDFLLPERFDLKYVGADGEEHRPVMIHRGVISTMERF 527

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINY 593
             I+IEN+KG  P WL+P Q  +  +++   ++YA ++A  L+   +  + D RNE + Y
Sbjct: 528 TAILIENYKGAFPTWLAPHQVTLIPVSNEAHIDYAWQVAKKLRDKGVRADVDERNEKMQY 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR     KIP  +I GDKE  + ++ +RR+G   T  + + + +  +  +
Sbjct: 588 KIRASQTSKIPYQLIVGDKEVEDGTVNVRRYGQKETHTIPVDEFVEQILAD 638


>gi|77408338|ref|ZP_00785079.1| threonyl-tRNA synthetase [Streptococcus agalactiae COH1]
 gi|77173019|gb|EAO76147.1| threonyl-tRNA synthetase [Streptococcus agalactiae COH1]
          Length = 647

 Score =  656 bits (1692), Expect = 0.0,   Method: Composition-based stats.
 Identities = 270/650 (41%), Positives = 407/650 (62%), Gaps = 23/650 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            IK+TFPDG+I+ F    T  ++A+SIS SLAKKA+A   NG++ D +  +  +GSIEI+
Sbjct: 1   MIKITFPDGAIREFESGITTFEIAQSISNSLAKKALAGKFNGQLIDTTRAIEEDGSIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQ 121
           TP+   +L V+RHS AH+ A+A + ++P++ + +GP I DGFYYD D +    S+D+L +
Sbjct: 61  TPDHEDALGVLRHSAAHLFAQAAKRLFPDLCLGVGPAIHDGFYYDTDNKSGQISNDDLPR 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE++M++I+  + P +++ +S E+A ELF+   + YKVE++    A++ +T+YRQGE+ D
Sbjct: 121 IEEEMKKIVKENHPCIREEISKEEALELFK--DDPYKVELISE-HAEDGLTVYRQGEFVD 177

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ R+YGTAW  +++L  YL   EE+
Sbjct: 178 LCRGPHVPSTGRIQVFHLL-NVAGAYWRGNSDNAMMQRVYGTAWFDKKDLKAYLKRREEA 236

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF +  +   G+ FW   G  I + L  Y+  ++I   Y+ + TP +
Sbjct: 237 KERDHRKLGKELDLFMVNPEVGQGLPFWLPNGATIRRELERYIVDKEIASGYQHVYTPPM 296

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
                ++ SGHWD YR +MF          D   F L+PMNCP H+ V+ H + SYRELP
Sbjct: 297 ASVEFYKTSGHWDHYREDMFPTMDMG----DGEEFVLRPMNCPHHIEVYKHHVHSYRELP 352

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  T +DAH+F T EQ+ +E LK  NLI  IY+DF 
Sbjct: 353 IRIAELGMMHRYEKSGALTGLQRVREMTLNDAHIFVTPEQIKDEFLKALNLIAEIYEDFN 412

Query: 420 FEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R      K   +D +W++A+ ++K  +D         ++     GE AFY
Sbjct: 413 LTDYRFRLSYRDPEDKHKYYDNDEMWENAQAMLKEAMDDFG------LDYFEAEGEAAFY 466

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G +    TIQ+DF LP RF+  Y+ +  E+  P+MIHR    ++ERF 
Sbjct: 467 GPKLDIQVKTALGNEETLSTIQLDFLLPERFDLKYIGADGEEHRPIMIHRGGISTMERFT 526

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IE +KG  P WL+P Q  V  I++   ++YA E+A  LK   +  E D RNE + YK
Sbjct: 527 AILIETYKGAFPTWLAPQQVSVIPISNEAHIDYAWEVARALKDRGIRAEVDDRNEKMQYK 586

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IR    +KIP  +I GDKE  E+++ +RR+GS  T+  S+ + +  +  +
Sbjct: 587 IRAAQTQKIPYQLIVGDKEMEEKAVNVRRYGSKATETKSIEEFVESILAD 636


>gi|257421590|ref|ZP_05598580.1| threonyl-tRNA synthetase [Enterococcus faecalis X98]
 gi|257163414|gb|EEU93374.1| threonyl-tRNA synthetase [Enterococcus faecalis X98]
          Length = 645

 Score =  656 bits (1692), Expect = 0.0,   Method: Composition-based stats.
 Identities = 259/651 (39%), Positives = 401/651 (61%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +TFPDG++K F    T  DVA+SIS SLAKKA+A   NG + DL  P+  +GS+EI+
Sbjct: 2   SIHITFPDGAVKPFDSGITTFDVAKSISNSLAKKALAGKFNGVLIDLDRPIVEDGSLEIV 61

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
           TP+   +L ++RHS AH+MA A++ ++P ++  +GP I+ GFYYD D  E P ++++L  
Sbjct: 62  TPDHEDALGILRHSAAHLMANALRRLFPNIKFGVGPAIDSGFYYDTDNGESPVTAEDLPA 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE +M +I+  ++P +++ +S  +A EL     + YKVE++  +P  E +T+Y QG++ D
Sbjct: 122 IEAEMMKIVKENNPIVRKEISRAEALEL--FADDPYKVELITDLPEDEIITVYDQGDFVD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG HV STG+++ F KL+ VAGAYWRG+S+  M+ RIYGTA+  +++L +++   EE+
Sbjct: 180 LCRGVHVPSTGRIQVF-KLLSVAGAYWRGNSDNHMMQRIYGTAFFDKKDLKEFIKMREEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF ++++ GSG+ FW  KG  I +T+  Y+  ++I   Y+ + TP +
Sbjct: 239 KERDHRKLGKELDLFMVSQEVGSGLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIM 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            D  L++ SGHWD Y  +MF          D     L+PMNCP H+ V+ + + SYRELP
Sbjct: 299 ADVELYKTSGHWDHYHEDMFPPMDMG----DGEMLVLRPMNCPHHMMVYKNDIHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  +   L++++Y DF 
Sbjct: 355 IRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVAVYADFN 414

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R           DA+W+ A+ ++K  +D ++      ++     GE AFY
Sbjct: 415 ITDYRFRLSYRDPNNTDKYFDDDAMWEKAQAMLKAAMDELE------LDYFEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK-CHPVMIHRAVFGSIERF 534
           GPK +  +K A+G +    TIQ+DF LP RF+  YV    E    PV+IHR +  ++ERF
Sbjct: 469 GPKLDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTMERF 528

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           +  + E +KG  P WL+PIQA +  ++  +  EYA EI   L++  L +E D RNE + Y
Sbjct: 529 VAYLTEVYKGAFPTWLAPIQATIIPVSVEAHSEYAYEIKERLQAQGLRVEVDDRNEKMGY 588

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR    +K+P  ++ GDKE  + ++ +RR+GS  T    L   I  +  E
Sbjct: 589 KIRASQTQKVPYQLVVGDKEMEDATVNVRRYGSKETSVEDLSIFIDSMAAE 639


>gi|251781963|ref|YP_002996265.1| threonyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|242390592|dbj|BAH81051.1| threonyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|323126789|gb|ADX24086.1| threonyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis ATCC 12394]
          Length = 647

 Score =  656 bits (1692), Expect = 0.0,   Method: Composition-based stats.
 Identities = 270/660 (40%), Positives = 410/660 (62%), Gaps = 26/660 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            IK+TFPDG+++ F    T  ++AESIS+SLAKKA+A   NG++ D +  +  +GSIEI+
Sbjct: 1   MIKITFPDGAVREFESGVTTFEIAESISKSLAKKALAGKFNGQLIDTTRAIEEDGSIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQ 121
           TP+   +  V+RHS AH+ A+A + ++P + + +GP I +GFYYD D  +   S+++L +
Sbjct: 61  TPDHEDAYDVLRHSAAHLFAQAAKRLFPNLHLGVGPAIAEGFYYDTDNADGQISNEDLPR 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE +MQ+I+  + P +++ ++ E+A ELF+   + YKVE++    A   +T+YRQGE+ D
Sbjct: 121 IEAEMQKIVKENYPCIREEVTKEEALELFK--DDPYKVELINE-HAGAGLTVYRQGEFVD 177

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ R+YGTAW  +++L  YL  LEE+
Sbjct: 178 LCRGPHVPSTGRIQVFHLL-NVAGAYWRGNSDNNMMQRVYGTAWFDKKDLKAYLTRLEEA 236

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+++   G+ FW   G  I +TL  Y+  +++   Y+ + TP +
Sbjct: 237 KERDHRKLGKELDLFMISQEVGQGLPFWLPDGATIRRTLERYITDKELASGYQHVYTPPL 296

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHW+ Y+ +MF V        D   F L+PMNCP H+ V+ + + SYRELP
Sbjct: 297 ASVELYKTSGHWEHYQEDMFPVMDMG----DGEEFVLRPMNCPHHIQVYKNHVHSYRELP 352

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  T +D H+F T EQ+ +E  +   LII +Y+DF 
Sbjct: 353 IRIAELGMMHRYEKSGALSGLQRVREMTLNDGHIFVTPEQIRDEFKRTLQLIIDVYEDFN 412

Query: 420 FEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R      K   +D +W++A+ ++KG +D +       ++     GE AFY
Sbjct: 413 LTDYRFRLSYRDPEDTHKYYDNDEMWENAQAMLKGAMDDMG------VDYFEAEGEAAFY 466

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G +    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF 
Sbjct: 467 GPKLDIQVKTALGNEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMIHRGVISTMERFT 526

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IE +KG  P WL+P Q  V  I++   ++YA E+A  L+   +  + D RNE + YK
Sbjct: 527 AILIETYKGAFPTWLAPHQVTVIPISNEAHIDYAWEVAKTLRDRGVRADVDDRNEKMQYK 586

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL---TKESLPPDCQ 651
           IR     KIP  +I GDKE  E+S+ +RR+GS  T   S+ D +  +         PD Q
Sbjct: 587 IRASQTSKIPYQLIVGDKEMEEKSVNVRRYGSKATHTESVEDFVENILVDIARKSRPDAQ 646


>gi|25010739|ref|NP_735134.1| threonyl-tRNA synthetase [Streptococcus agalactiae NEM316]
 gi|77410759|ref|ZP_00787117.1| threonyl-tRNA synthetase [Streptococcus agalactiae CJB111]
 gi|73919827|sp|Q8E693|SYT_STRA3 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|23095093|emb|CAD46328.1| theronyl-tRNA synthetase [Streptococcus agalactiae NEM316]
 gi|77163138|gb|EAO74091.1| threonyl-tRNA synthetase [Streptococcus agalactiae CJB111]
          Length = 647

 Score =  656 bits (1692), Expect = 0.0,   Method: Composition-based stats.
 Identities = 269/650 (41%), Positives = 409/650 (62%), Gaps = 23/650 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            IK+TFPDG+I+ F    T  ++A+SIS SLAKKA+A   NG++ D +  +  +GSIEI+
Sbjct: 1   MIKITFPDGAIREFESGITTFEIAQSISNSLAKKALAGKFNGQLIDTTRAIEEDGSIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQ 121
           TP+   +L V+RHS AH+ A+A + ++P++ + +GP I+DGFYYD D +    S+D+L +
Sbjct: 61  TPDHEDALGVLRHSAAHLFAQAAKRLFPDLCLGVGPAIQDGFYYDTDNKSGQISNDDLPR 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +E++M++I+  + P +++ +S E+A ELF+   + YKVE++    A++ +T+YRQGE+ D
Sbjct: 121 VEEEMKKIVKENHPCIREEISKEEALELFK--DDPYKVELISE-HAEDGLTVYRQGEFVD 177

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ R+YGTAW  +++L  YL   EE+
Sbjct: 178 LCRGPHVPSTGRIQVFHLL-NVAGAYWRGNSDNAMMQRVYGTAWFDKKDLKAYLKRREEA 236

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF +  +   G+ FW   G  I + L  Y+  ++I   Y+ + TP +
Sbjct: 237 KERDHRKLGKELDLFMVNPEVGQGLPFWLPNGATIRRELERYIVDKEIASGYQHVYTPPM 296

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
                ++ SGHWD YR +MF          D   F L+PMNCP H+ V+ H + SYRELP
Sbjct: 297 ASVEFYKTSGHWDHYREDMFPTMDMG----DGEEFVLRPMNCPHHIEVYKHHVHSYRELP 352

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  T +DAH+F T EQ+ +E LK  NLI  IY+DF 
Sbjct: 353 IRIAELGMMHRYEKSGALTGLQRVREMTLNDAHIFVTPEQIKDEFLKALNLIAEIYEDFN 412

Query: 420 FEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R      K   +D +W++A+ ++K  +D         ++     GE AFY
Sbjct: 413 LTDYRFRLSYRDPEDKHKYYDNDEMWENAQAMLKEAMDDFG------LDYFEAEGEAAFY 466

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G +    TIQ+DF LP RF+  Y+ +  E+  P+MIHR    ++ERF 
Sbjct: 467 GPKLDIQVKTALGNEETLSTIQLDFLLPERFDLKYIGADGEEHRPIMIHRGGISTMERFT 526

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IE +KG  P WL+P Q  V  I++   ++YA E+A +LK   +  E D RNE + YK
Sbjct: 527 AILIETYKGAFPTWLAPQQVSVIPISNEAHIDYAWEVARVLKDRGIRAEVDDRNEKMQYK 586

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IR    +KIP  +I GDKE  E+++ +RR+GS  T+  S+ + +  +  +
Sbjct: 587 IRAAQTQKIPYQLIVGDKEMEEKAVNVRRYGSKATETKSIEEFVESILAD 636


>gi|29377326|ref|NP_816480.1| threonyl-tRNA synthetase [Enterococcus faecalis V583]
 gi|255971805|ref|ZP_05422391.1| threonyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|256854147|ref|ZP_05559512.1| threonyl-tRNA synthetase [Enterococcus faecalis T8]
 gi|73919789|sp|Q830D0|SYT_ENTFA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|29344793|gb|AAO82550.1| threonyl-tRNA synthetase [Enterococcus faecalis V583]
 gi|255962823|gb|EET95299.1| threonyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|256711090|gb|EEU26133.1| threonyl-tRNA synthetase [Enterococcus faecalis T8]
 gi|323481721|gb|ADX81160.1| threonyl-tRNA synthetase [Enterococcus faecalis 62]
          Length = 645

 Score =  656 bits (1692), Expect = 0.0,   Method: Composition-based stats.
 Identities = 259/651 (39%), Positives = 401/651 (61%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +TFPDG++K F    T  DVA+SIS SLAKKA+A   NG + DL  P+  +GS+EI+
Sbjct: 2   SIHITFPDGAVKPFDSGITTFDVAKSISNSLAKKALAGKFNGVLIDLDRPIVEDGSLEIV 61

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
           TP+   +L ++RHS AH+MA A++ ++P ++  +GP I+ GFYYD D  E P ++++L  
Sbjct: 62  TPDHEDALGILRHSSAHLMANALRRLFPNIKFGVGPAIDSGFYYDTDNGESPVTAEDLPA 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE +M +I+  ++P +++ +S  +A EL     + YKVE++  +P  E +T+Y QG++ D
Sbjct: 122 IEAEMMKIVKENNPIVRKEISRAEALEL--FADDPYKVELITDLPEDEIITVYDQGDFVD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG HV STG+++ F KL+ VAGAYWRG+S+  M+ RIYGTA+  +++L +++   EE+
Sbjct: 180 LCRGVHVPSTGRIQVF-KLLSVAGAYWRGNSDNHMMQRIYGTAFFDKKDLKEFIKMREEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF ++++ GSG+ FW  KG  I +T+  Y+  ++I   Y+ + TP +
Sbjct: 239 KERDHRKLGKELDLFMVSQEVGSGLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIM 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            D  L++ SGHWD Y  +MF          D     L+PMNCP H+ V+ + + SYRELP
Sbjct: 299 ADVELYKTSGHWDHYHEDMFPPMDMG----DGEMLVLRPMNCPHHMMVYKNDIHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  +   L++++Y DF 
Sbjct: 355 IRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVAVYADFN 414

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R           DA+W+ A+ ++K  +D ++      ++     GE AFY
Sbjct: 415 ITDYRFRLSYRDPNNTDKYFDDDAMWEKAQAMLKAAMDELE------LDYFEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK-CHPVMIHRAVFGSIERF 534
           GPK +  +K A+G +    TIQ+DF LP RF+  YV    E    PV+IHR +  ++ERF
Sbjct: 469 GPKLDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTMERF 528

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           +  + E +KG  P WL+PIQA +  ++  +  EYA EI   L++  L +E D RNE + Y
Sbjct: 529 VAYLTEVYKGAFPTWLAPIQATIIPVSVEAHSEYAYEIKERLQAQGLRVEVDDRNEKMGY 588

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR    +K+P  ++ GDKE  + ++ +RR+GS  T    L   I  +  E
Sbjct: 589 KIRASQTQKVPYQLVVGDKEMEDATVNVRRYGSKETSVEDLSIFIDSMAAE 639


>gi|327536012|gb|AEA94846.1| threonine--tRNA ligase [Enterococcus faecalis OG1RF]
          Length = 660

 Score =  656 bits (1691), Expect = 0.0,   Method: Composition-based stats.
 Identities = 259/651 (39%), Positives = 401/651 (61%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +TFPDG++K F    T  DVA+SIS SLAKKA+A   NG + DL  P+  +GS+EI+
Sbjct: 17  SIHITFPDGAVKPFDSGVTTFDVAKSISNSLAKKALAGKFNGVLIDLDRPIVEDGSLEIV 76

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
           TP+   +L ++RHS AH+MA A++ ++P ++  +GP I+ GFYYD D  E P ++++L  
Sbjct: 77  TPDHEDALGILRHSSAHLMANALRRLFPNIKFGVGPAIDSGFYYDTDNGESPVTAEDLPA 136

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE +M +I+  ++P +++ +S  +A EL     + YKVE++  +P  E +T+Y QG++ D
Sbjct: 137 IEAEMMKIVKENNPIVRKEISRAEALEL--FADDPYKVELITDLPEDEIITIYDQGDFVD 194

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG HV STG+++ F KL+ VAGAYWRG+S+  M+ RIYGTA+  +++L +++   EE+
Sbjct: 195 LCRGVHVPSTGRIQVF-KLLSVAGAYWRGNSDNHMMQRIYGTAFFDKKDLKEFIKMREEA 253

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF ++++ GSG+ FW  KG  I +T+  Y+  ++I   Y+ + TP +
Sbjct: 254 KERDHRKLGKELDLFMVSQEVGSGLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIM 313

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            D  L++ SGHWD Y  +MF          D     L+PMNCP H+ V+ + + SYRELP
Sbjct: 314 ADVELYKTSGHWDHYHEDMFPPMDMG----DGEMLVLRPMNCPHHMMVYKNDIHSYRELP 369

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  +   L++++Y DF 
Sbjct: 370 IRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVAVYADFN 429

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R           DA+W+ A+ ++K  +D ++      ++     GE AFY
Sbjct: 430 ITDYRFRLSYRDPNNTDKYFDDDAMWEKAQAMLKAAMDELE------LDYFEAEGEAAFY 483

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK-CHPVMIHRAVFGSIERF 534
           GPK +  +K A+G +    TIQ+DF LP RF+  YV    E    PV+IHR +  ++ERF
Sbjct: 484 GPKLDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTMERF 543

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           +  + E +KG  P WL+PIQA +  ++  +  EYA EI   L++  L +E D RNE + Y
Sbjct: 544 VAYLTEVYKGAFPTWLAPIQATIIPVSVEAHSEYAYEIKERLQAQGLRVEVDDRNEKMGY 603

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR    +K+P  ++ GDKE  + ++ +RR+GS  T    L   I  +  E
Sbjct: 604 KIRASQTQKVPYQLVVGDKEMEDATVNVRRYGSKETSVEDLSIFIDSMAAE 654


>gi|315033108|gb|EFT45040.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0017]
          Length = 672

 Score =  656 bits (1691), Expect = 0.0,   Method: Composition-based stats.
 Identities = 259/651 (39%), Positives = 401/651 (61%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +TFPDG++K F    T  DVA+SIS SLAKKA+A   NG + DL  P+  +GS+EI+
Sbjct: 29  SIHITFPDGAVKPFDSGVTTFDVAKSISNSLAKKALAGKFNGVLIDLDRPIVEDGSLEIV 88

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
           TP+   +L ++RHS AH+MA A++ ++P ++  +GP I+ GFYYD D  E P ++++L  
Sbjct: 89  TPDHEDALGILRHSSAHLMANALRRLFPNIKFGVGPAIDSGFYYDTDNGESPVTAEDLPA 148

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE +M +I+  ++P +++ +S  +A EL     + YKVE++  +P  E +T+Y QG++ D
Sbjct: 149 IEAEMMKIVKENNPIVRKEISRAEALEL--FADDPYKVELITDLPEDEIITVYDQGDFVD 206

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG HV STG+++ F KL+ VAGAYWRG+S+  M+ RIYGTA+  +++L +++   EE+
Sbjct: 207 LCRGVHVPSTGRIQVF-KLLSVAGAYWRGNSDNHMMQRIYGTAFFDKKDLKEFIKMREEA 265

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF ++++ GSG+ FW  KG  I +T+  Y+  ++I   Y+ + TP +
Sbjct: 266 KERDHRKLGKELDLFMVSQEVGSGLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIM 325

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            D  L++ SGHWD Y  +MF          D     L+PMNCP H+ V+ + + SYRELP
Sbjct: 326 ADVELYKTSGHWDHYHEDMFPPMDMG----DGEMLVLRPMNCPHHMMVYKNDIHSYRELP 381

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  +   L++++Y DF 
Sbjct: 382 IRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVAVYADFN 441

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R           DA+W+ A+ ++K  +D ++      ++     GE AFY
Sbjct: 442 ITDYRFRLSYRDPNNTDKYFDDDAMWEKAQAMLKAAMDELE------LDYFEAEGEAAFY 495

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK-CHPVMIHRAVFGSIERF 534
           GPK +  +K A+G +    TIQ+DF LP RF+  YV    E    PV+IHR +  ++ERF
Sbjct: 496 GPKLDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTMERF 555

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           +  + E +KG  P WL+PIQA +  ++  +  EYA EI   L++  L +E D RNE + Y
Sbjct: 556 VAYLTEVYKGAFPTWLAPIQATIIPVSVEAHSEYAYEIKERLQAQGLRVEVDDRNEKMGY 615

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR    +K+P  ++ GDKE  + ++ +RR+GS  T    L   I  +  E
Sbjct: 616 KIRASQTQKVPYQLVVGDKEMEDATVNVRRYGSKETSVEDLSIFIDSMAAE 666


>gi|294636227|ref|ZP_06714641.1| threonine--tRNA ligase [Edwardsiella tarda ATCC 23685]
 gi|291090484|gb|EFE23045.1| threonine--tRNA ligase [Edwardsiella tarda ATCC 23685]
          Length = 622

 Score =  656 bits (1691), Expect = 0.0,   Method: Composition-based stats.
 Identities = 292/624 (46%), Positives = 425/624 (68%), Gaps = 16/624 (2%)

Query: 24  SDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMA 82
            D+A  I   LAK  +A  +NG++ D  D +  + ++ IIT +D   + ++RHSCAH++ 
Sbjct: 1   MDIARDIGPGLAKACIAGRVNGELVDACDLIESDATVAIITAKDQEGVEILRHSCAHLLG 60

Query: 83  EAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLS 142
            A++ +WP+ ++AIGP+I++GFYYD D +   + D+L ++EK+M E+  +D   +K+ +S
Sbjct: 61  HAIKQLWPQTKMAIGPVIDNGFYYDVDLDHTLTQDDLDRLEKRMHELAEKDYDVIKKKVS 120

Query: 143 HEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLM 201
            ++AR+ F ++ E+YKV IL E+I   +   LY   E+ D+CRGPHV +      F KL 
Sbjct: 121 WQEARDAFVARDESYKVAILDENISHDDKPGLYHHEEYVDMCRGPHVPNMRFCHHF-KLQ 179

Query: 202 KVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED 261
           K +GAYWRGDSN  ML RIYGTAW  +++L  YL  LEE+ KRDHRK+ +++DL+H+ E+
Sbjct: 180 KSSGAYWRGDSNNKMLQRIYGTAWADKKQLNAYLQRLEEAAKRDHRKIGKQLDLYHMQEE 239

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
             G++FWH  GW IF+ L +++R K+K   Y+E+  P ++D+ LW+++GHW++Y+  MF 
Sbjct: 240 APGMVFWHNDGWTIFRELEAFVRMKLKAYQYQEVKGPFMMDRVLWEKTGHWENYKDAMFT 299

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
                 T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+AEFGS +RNEPSGSLHGL
Sbjct: 300 ------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGL 353

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           MRVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  FGFEKI+VKLSTRPEKR+GSD +
Sbjct: 354 MRVRGFTQDDAHIFCTEEQIRDEVNSCIKMVYDMYSTFGFEKIVVKLSTRPEKRIGSDEI 413

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDF 500
           WD AE  +   L+      ++ I      GEGAFYGPK E+ L D + R WQCGT+Q+DF
Sbjct: 414 WDRAEEDLAAALE------ENGIPFEYQPGEGAFYGPKIEFTLHDCLDRAWQCGTVQLDF 467

Query: 501 NLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTI 560
           +LP R NA YV  ++E+  PVMIHRA+ GS+ERFIGI+ E F G  P WL+P+QA+V  I
Sbjct: 468 SLPGRLNASYVGENNERVVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQAVVMNI 527

Query: 561 TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
           T S  EY +E+   L++  +  ++D RNE I +KIREH+++++P +++CGDKE     + 
Sbjct: 528 TDSQAEYVEELNKKLQAAGIRAKSDLRNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVA 587

Query: 621 IRRFGSTTTQKVSLLDAIPILTKE 644
           +R         +S+ D I  L +E
Sbjct: 588 VRTRRGKDLGVMSIDDVIEKLLQE 611


>gi|229549033|ref|ZP_04437758.1| threonyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
 gi|312904390|ref|ZP_07763551.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|229305826|gb|EEN71822.1| threonyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
 gi|310632289|gb|EFQ15572.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|315162804|gb|EFU06821.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0645]
 gi|315576849|gb|EFU89040.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0630]
          Length = 660

 Score =  656 bits (1691), Expect = 0.0,   Method: Composition-based stats.
 Identities = 259/651 (39%), Positives = 402/651 (61%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +TFPDG++K F    T  DVA+SIS SLAKKA+A   NG + DL  P+  +GS+EI+
Sbjct: 17  SIHITFPDGAVKPFDSGVTTFDVAKSISNSLAKKALAGKFNGVLIDLDRPIVEDGSLEIV 76

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
           TP+   +L ++RHS AH+MA A++ ++P ++  +GP I+ GFYYD D  E P ++++L  
Sbjct: 77  TPDHEDALGILRHSSAHLMANALRRLFPNIKFGVGPAIDSGFYYDTDNGESPVTAEDLPA 136

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE +M +I+  ++P +++ +S  +A EL     + YKVE++  +P  E +T+Y QG++ D
Sbjct: 137 IEAEMMKIVKENNPIVRKEISRAEALEL--FADDPYKVELITDLPEDEIITVYDQGDFVD 194

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG HV STG+++ F KL+ VAGAYWRG+S+  M+ RIYGTA+  +++L +++   EE+
Sbjct: 195 LCRGVHVPSTGRIQVF-KLLSVAGAYWRGNSDNHMMQRIYGTAFFDKKDLKEFIKMREEA 253

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF ++++ GSG+ FW  KG  I +T+  Y+  ++I+  Y+ + TP +
Sbjct: 254 KERDHRKLGKELDLFMVSQEVGSGLPFWLPKGATIRRTIERYIVDKEIRLGYQHVYTPIM 313

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            D  L++ SGHWD Y  +MF          D     L+PMNCP H+ V+ + + SYRELP
Sbjct: 314 ADVELYKTSGHWDHYHEDMFPPMDMG----DGEMLVLRPMNCPHHMMVYKNDIHSYRELP 369

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  +   L++++Y DF 
Sbjct: 370 IRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVAVYADFN 429

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R           DA+W+ A+ ++K  +D ++      ++     GE AFY
Sbjct: 430 ITDYRFRLSYRDPNNTDKYFDDDAMWEKAQAMLKAAMDELE------LDYFEAEGEAAFY 483

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK-CHPVMIHRAVFGSIERF 534
           GPK +  +K A+G +    TIQ+DF LP RF+  YV    E    PV+IHR +  ++ERF
Sbjct: 484 GPKLDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTMERF 543

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           +  + E +KG  P WL+PIQA +  ++  +  EYA EI   L++  L +E D RNE + Y
Sbjct: 544 VAYLTEVYKGAFPTWLAPIQATIIPVSVEAHSEYAYEIKERLQAQGLRVEVDDRNEKMGY 603

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR    +K+P  ++ GDKE  + ++ +RR+GS  T    L   I  +  E
Sbjct: 604 KIRASQTQKVPYQLVVGDKEMEDATVNVRRYGSKETSVEDLSIFIDSMAAE 654


>gi|187931727|ref|YP_001891712.1| threonyl-tRNA synthetase [Francisella tularensis subsp.
           mediasiatica FSC147]
 gi|238691566|sp|B2SGS3|SYT_FRATM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|187712636|gb|ACD30933.1| threonyl-tRNA synthetase [Francisella tularensis subsp.
           mediasiatica FSC147]
          Length = 634

 Score =  656 bits (1691), Expect = 0.0,   Method: Composition-based stats.
 Identities = 299/643 (46%), Positives = 426/643 (66%), Gaps = 16/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            I + FPDGSI+ F       DVA+SIS SLAK  +A  I+ ++ D  D +     + +I
Sbjct: 1   MINIRFPDGSIREFEAGVNSLDVAKSISPSLAKATMAAYIDDQLKDAKDAINSNCELRLI 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +DP  L ++RHSCAH++A AV+ ++P  +V IGP++++GFYYDF  ++     +L  I
Sbjct: 61  TVKDPEGLEILRHSCAHLLAHAVKELYPNTEVTIGPVVDNGFYYDFSFKESIGEADLPTI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EKKM+E+  + +P   + +   +A E F+++ E YKVEI++SI A E + +Y Q  + DL
Sbjct: 121 EKKMKELAKKSAPVSYRVVPKAEAIEFFKAQGENYKVEIIDSI-ADEQMKIYTQDNFSDL 179

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ +T  +K F KL K+AGAYWRG+S+  ML+RIYGT W T+++L QYL  LEE+E
Sbjct: 180 CRGPHIPNTSVLKAF-KLTKLAGAYWRGNSDNEMLTRIYGTCWATKEDLEQYLNMLEEAE 238

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KRDHRK+ + +DLFH  ED  G+ FWH  G +I++ +  YMR    K    EI TP + D
Sbjct: 239 KRDHRKIGKVLDLFHFQEDSPGIAFWHDNGVRIWRQVEDYMRASNNKYGCSEIRTPLIAD 298

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             LWQ+SGH   Y  NMFA K       + R FA++PMNCP  V V+N  L SYR+LP+R
Sbjct: 299 FSLWQKSGHASKYAENMFATK------SENRDFAIRPMNCPTCVQVYNTKLHSYRDLPIR 352

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AEFG V+RNEPSGSLHGL+RVR FTQDD H+FCT EQ+  E + +      +YKDFGF 
Sbjct: 353 MAEFGIVHRNEPSGSLHGLLRVRSFTQDDGHIFCTPEQVEEEVILMVQQCFEVYKDFGFN 412

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              VK++ RPE R+G D  WD +E ++K  LD       + ++  +L GEGAFYGPK E+
Sbjct: 413 DFAVKIALRPENRIGDDETWDKSEQMLKNALDA------NNVSYELLPGEGAFYGPKIEF 466

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            LKDAIGR WQCGTIQ+DF++P R  A Y++ + EK  PVM+HRA+ GS+ERFIG++IE+
Sbjct: 467 HLKDAIGRSWQCGTIQLDFSMPQRLGATYIDKNGEKQVPVMLHRAIVGSLERFIGMLIEH 526

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + GNLPLWL+P+Q  V  I+++  +Y +E+  +L+ + +  + D RNE I +KIREH++ 
Sbjct: 527 YAGNLPLWLAPVQVAVMGISNNQDDYCKEVFIMLEKNGIRAKLDLRNEKIGFKIREHTLL 586

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           ++P ++I G  E  ++ I IR+       ++S+ D    L K+
Sbjct: 587 RVPYLVILGKNEQEQKIITIRKHSGEDLGQMSVDDFCAFLDKQ 629


>gi|150018038|ref|YP_001310292.1| threonyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
 gi|149904503|gb|ABR35336.1| threonyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
          Length = 635

 Score =  656 bits (1691), Expect = 0.0,   Method: Composition-based stats.
 Identities = 292/643 (45%), Positives = 423/643 (65%), Gaps = 16/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEII 62
            I +   DGSIK     ++  D+A SIS++LAK AV   +NG + DL+  ++    + I+
Sbjct: 1   MINIKLKDGSIKEIADESSIYDLANSISKNLAKVAVVGEVNGTLVDLNYKLKNNDEVNIL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D +++ VIRHS +H+MA+AV+ I+ + ++AIGP I +GFYYDFD E   S+++L +I
Sbjct: 61  TYDDEKAVEVIRHSTSHVMAQAVKRIYKDSKLAIGPAINNGFYYDFDIENSLSNEDLDKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M +II  +  F +  +S ++A +L E K E YKVE+++ +P  E ++LY+QG++ DL
Sbjct: 121 EAEMNKIIDENLSFERIDISRDEAIKLMEEKGETYKVELIKDLPEAEKISLYKQGDYIDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ ST  +K F KL+ VAGAYWRG+    ML R+YG A+++++EL  +L+ LEE++
Sbjct: 181 CRGPHIPSTKYIKAF-KLLSVAGAYWRGNEKNKMLQRVYGVAFSSKKELEVHLHNLEEAK 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KRDHRKL +E+ LF  AE+G G  F   KG  +  TLI + R+   +D Y EI TP +L+
Sbjct: 240 KRDHRKLGKELKLFTFAEEGPGFPFMLPKGVILKNTLIDFWRKLHYEDGYVEIETPIMLN 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW  YR NM+       +  D   FALKPMNCPG + V+     SYR+ P+R
Sbjct: 300 KKLWETSGHWYHYRENMYT------SSIDEEEFALKPMNCPGGMLVYKSESHSYRDFPMR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           + E G V+R+E SG+LHGLMRVR FTQDDAH+F   +Q+ +E   + NLI  +Y  FGF+
Sbjct: 354 VGELGRVHRHELSGALHGLMRVRAFTQDDAHIFMLPDQIKSEIKGVINLIDKVYSKFGFK 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
             + +LSTRPE  +GSD  W+ AE+ +KG LD +       +   +  G+GAFYGPK ++
Sbjct: 414 YNL-ELSTRPEDSMGSDEEWELAESSLKGALDELN------LEYKINEGDGAFYGPKIDF 466

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L+D+IGR WQCGTIQ+DF LP RF   YV S  EK  P++IHR VFGSIERFIGI+IE+
Sbjct: 467 HLEDSIGRTWQCGTIQLDFQLPQRFELEYVGSDGEKHRPIVIHRVVFGSIERFIGILIEH 526

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           F G  P WLSP+Q  +  I++    Y+++I + L S  + +E D ++E I YKIRE   +
Sbjct: 527 FAGKFPTWLSPVQVKILPISNKFNSYSEKIKDKLSSEGIRVEIDQKDEKIGYKIREARNE 586

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           ++P III G+KEA+E +I +R   +     ++L D I  +  E
Sbjct: 587 RVPYIIIVGEKEAAENNISLRSRSNGDEGTLNLEDLIERINNE 629


>gi|261339515|ref|ZP_05967373.1| threonine--tRNA ligase [Enterobacter cancerogenus ATCC 35316]
 gi|288318328|gb|EFC57266.1| threonine--tRNA ligase [Enterobacter cancerogenus ATCC 35316]
          Length = 622

 Score =  656 bits (1691), Expect = 0.0,   Method: Composition-based stats.
 Identities = 291/632 (46%), Positives = 421/632 (66%), Gaps = 16/632 (2%)

Query: 24  SDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMA 82
            DVA  I   LAK  +A  ++G++ D SD +  +  + IIT +D   L +IRHSCAH++ 
Sbjct: 1   MDVALDIGPGLAKATIAGRVDGELVDASDLIENDAKLSIITAKDEEGLEIIRHSCAHLLG 60

Query: 83  EAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLS 142
            A++ +WP  ++AIGP+I++GFYYD D +   + +++  +EK+M E+   +   +K+ +S
Sbjct: 61  HAIKQLWPNTKMAIGPVIDNGFYYDVDLDHTLTQEDIDALEKRMHELAESNYDVIKKKVS 120

Query: 143 HEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLM 201
             +ARE F  + E+YKV IL E+I   +   LY   E+ D+CRGPHV +      F KLM
Sbjct: 121 WHEARETFVKRGESYKVSILDENISHDDKPGLYHHEEYIDMCRGPHVPNMRFCHHF-KLM 179

Query: 202 KVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED 261
           K+AGAYWRGDSN  ML RIYGTAW  ++ L  YL  LEE+ KRDHRK+ +++DL+H+ E+
Sbjct: 180 KIAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEE 239

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
             G++FWH  GW IF+ L +++R K+K+  Y+E+  P ++D+ LW+++GHWD+Y+  MF 
Sbjct: 240 APGMVFWHNDGWTIFRELETFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFT 299

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
                 T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+AEFGS +RNEPSG+LHGL
Sbjct: 300 ------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGL 353

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           MRVRGFTQDDAH+FCT++Q+ +E      ++  +Y  FGFEKI+VKLSTRPEKR+GSD  
Sbjct: 354 MRVRGFTQDDAHIFCTEDQVRDEVNACIRMVYDMYSTFGFEKIVVKLSTRPEKRIGSDET 413

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDF 500
           WD AE  +   L+      ++ I     LGEGAFYGPK E+ L D + R WQCGT+Q+DF
Sbjct: 414 WDRAEADLAVALE------ENGIPFEYQLGEGAFYGPKIEFTLYDCLDRAWQCGTVQLDF 467

Query: 501 NLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTI 560
           +LP R +A YV   +E+  PVMIHRA+ GS+ERFIGI+ E F G  P WL+P+Q +V  I
Sbjct: 468 SLPQRLSASYVGEDNERQVPVMIHRAILGSLERFIGILTEEFAGFFPTWLAPVQVVVMNI 527

Query: 561 TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
           T S  +Y +E+   L++  + ++ D RNE I +KIREH+++++P +++CGDKE     + 
Sbjct: 528 TDSQADYVKELTQKLQNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVA 587

Query: 621 IRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           +R         + + + I  L +E      Q+
Sbjct: 588 VRTRRGKDLGSLDVSEVIEKLQQEIRSRSLQQ 619


>gi|72381873|ref|YP_291228.1| threonyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A]
 gi|123759915|sp|Q46LV3|SYT_PROMT RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|72001723|gb|AAZ57525.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Prochlorococcus
           marinus str. NATL2A]
          Length = 641

 Score =  656 bits (1691), Expect = 0.0,   Method: Composition-based stats.
 Identities = 309/642 (48%), Positives = 432/642 (67%), Gaps = 16/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPE 65
           +T PDG+ K +    T   +A  I   LAK A+A  +NG++ D   P+ + S I+IIT +
Sbjct: 4   ITLPDGTEKKYDSAVTIDQIASEIGPGLAKAALAGRVNGELIDTCIPITQNSHIQIITSK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHS AH++  AV+ ++PE ++AIGP+IEDGFYYD   +  F+ D+L +IEK+
Sbjct: 64  DDEGLEIIRHSFAHLLGHAVKQLYPEAKMAIGPVIEDGFYYDISYKDTFTPDDLLKIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+E++ RD     + +S EKA+E+F  + E +K++I+++IP  E + LY+  E+ D+CRG
Sbjct: 124 MKELVNRDYSVGVEIVSPEKAKEVFTDRGEIFKLDIVKNIPKNEIIKLYKHQEYIDMCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +T  ++ F KLMKV+GAYWRGDSN  ML RIYGTAW + +EL +YL  +EE+EKRD
Sbjct: 184 PHVPNTRHLRAF-KLMKVSGAYWRGDSNNEMLQRIYGTAWKSSKELKEYLSRIEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHL 304
           HRKL ++  LFH  E+  G++FWH KGW I++ L  ++R  I K DY+E+ +PQV+D+ L
Sbjct: 243 HRKLGKKYSLFHSQEEAPGMVFWHPKGWTIYRILEDFIRETITKYDYQEVKSPQVVDRSL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHWD ++ +MF       T  + R +A+KPMNCP H+ +FN GLKSYR+LP+RL+E
Sbjct: 303 WEKSGHWDKFKEDMFT------TTSENREYAIKPMNCPCHIQIFNQGLKSYRDLPIRLSE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNEPSG+LHGLMRVR F QDDAH+FCT EQ+  E     +L+  +YK FGF+ I+
Sbjct: 357 FGSCHRNEPSGALHGLMRVRNFVQDDAHIFCTDEQIQEEVQNFIDLVFEVYKTFGFDSIL 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +KLSTRP KRVGSD +WD +E  +   LD+        ++  +L GEGAFYGPK E+ LK
Sbjct: 417 IKLSTRPVKRVGSDDIWDKSEKALSEALDS------KGLDWSLLPGEGAFYGPKIEFSLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D + R WQCGTIQVDF++P R NA Y++    K  PVM+HRA+ GS ERFIGI+IEN+ G
Sbjct: 471 DCLNRVWQCGTIQVDFSMPQRLNASYIDITGRKQTPVMLHRAILGSFERFIGILIENYSG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
           N P WLSPIQ ++  IT    E      + L       E D RNE + +KIREH++++IP
Sbjct: 531 NFPTWLSPIQIMIMGITDRNNEACFTAKDKLVDFGFRAEIDIRNEKVGFKIREHTMQRIP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
            +II GDKE     I +R         +S+     ++  ES+
Sbjct: 591 FLIIIGDKEEENSEISVRTREGKDLGNMSIDKF-KLIIDESI 631


>gi|22536875|ref|NP_687726.1| threonyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
 gi|76787804|ref|YP_329459.1| threonyl-tRNA synthetase [Streptococcus agalactiae A909]
 gi|76799413|ref|ZP_00781564.1| threonyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
 gi|77405954|ref|ZP_00783034.1| threonyl-tRNA synthetase [Streptococcus agalactiae H36B]
 gi|77413516|ref|ZP_00789706.1| threonyl-tRNA synthetase [Streptococcus agalactiae 515]
 gi|73919828|sp|Q8E0L9|SYT_STRA5 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|123771973|sp|Q3K1Z4|SYT_STRA1 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|22533725|gb|AAM99598.1|AE014224_1 threonyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
 gi|76562861|gb|ABA45445.1| threonyl-tRNA synthetase [Streptococcus agalactiae A909]
 gi|76585236|gb|EAO61843.1| threonyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
 gi|77160460|gb|EAO71581.1| threonyl-tRNA synthetase [Streptococcus agalactiae 515]
 gi|77175465|gb|EAO78254.1| threonyl-tRNA synthetase [Streptococcus agalactiae H36B]
          Length = 647

 Score =  656 bits (1691), Expect = 0.0,   Method: Composition-based stats.
 Identities = 270/650 (41%), Positives = 409/650 (62%), Gaps = 23/650 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            IK+TFPDG+I+ F    T  ++A+SIS SLAKKA+A   NG++ D +  +  +GSIEI+
Sbjct: 1   MIKITFPDGAIREFESGITTFEIAQSISNSLAKKALAGKFNGQLIDTTRAIEEDGSIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQ 121
           TP+   +L V+RHS AH+ A+A + ++P++ + +GP I+DGFYYD D +    S+D+L +
Sbjct: 61  TPDHEDALGVLRHSAAHLFAQAAKRLFPDLCLGVGPAIQDGFYYDTDNKSGQISNDDLPR 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE++M++I+  + P +++ +S E+A ELF+   + YKVE++    A++ +T+YRQGE+ D
Sbjct: 121 IEEEMKKIVKENHPCIREEISKEEALELFK--DDPYKVELISE-HAEDGLTVYRQGEFVD 177

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ R+YGTAW  +++L  YL   EE+
Sbjct: 178 LCRGPHVPSTGRIQVFHLL-NVAGAYWRGNSDNAMMQRVYGTAWFDKKDLKAYLKRREEA 236

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF +  +   G+ FW   G  I + L  Y+  ++I   Y+ + TP +
Sbjct: 237 KERDHRKLGKELDLFMVNPEVGQGLPFWLPNGATIRRELERYIVDKEIASGYQHVYTPPM 296

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
                ++ SGHWD YR +MF          D   F L+PMNCP H+ V+ H + SYRELP
Sbjct: 297 ASVEFYKTSGHWDHYREDMFPTMDMG----DGEEFVLRPMNCPHHIEVYKHHVHSYRELP 352

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  T +DAH+F T EQ+ +E LK  NLI  IY+DF 
Sbjct: 353 IRIAELGMMHRYEKSGALTGLQRVREMTLNDAHIFVTPEQIKDEFLKALNLIAEIYEDFN 412

Query: 420 FEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R      K   +D +W++A+ ++K  +D         ++     GE AFY
Sbjct: 413 LTDYRFRLSYRDPEDKHKYYDNDEMWENAQAMLKEAMDDFG------LDYFEAEGEAAFY 466

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G +    TIQ+DF LP RF+  Y+ +  E+  P+MIHR    ++ERF 
Sbjct: 467 GPKLDIQVKTALGNEETLSTIQLDFLLPERFDLKYIGADGEEHRPIMIHRGGISTMERFT 526

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IE +KG  P WL+P Q  V  I++   ++YA E+A +LK   +  E D RNE + YK
Sbjct: 527 AILIETYKGAFPTWLAPQQVSVIPISNEAHIDYAWEVARVLKDRGIRAEVDDRNEKMQYK 586

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IR    +KIP  +I GDKE  E+++ +RR+GS  T+  S+ + +  +  +
Sbjct: 587 IRAAQTQKIPYQLIVGDKEMEEKAVNVRRYGSKATETKSIEEFVESILAD 636


>gi|242373974|ref|ZP_04819548.1| threonyl-tRNA synthetase 1 [Staphylococcus epidermidis M23864:W1]
 gi|242348328|gb|EES39930.1| threonyl-tRNA synthetase 1 [Staphylococcus epidermidis M23864:W1]
          Length = 654

 Score =  656 bits (1691), Expect = 0.0,   Method: Composition-based stats.
 Identities = 262/650 (40%), Positives = 405/650 (62%), Gaps = 21/650 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
             I + FPDG+ K F    T  D+A+SIS  L KKAVA   NG++ DL+ P+  +GSIEI
Sbjct: 11  DQINIQFPDGNSKAFDKGTTTEDIAQSISPGLRKKAVAGKFNGQMVDLTRPLEEDGSIEI 70

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +TP    +L V+RHS AH+MA+A++ ++ +V+  +GP+IE GFYYDFD ++  SSD+  +
Sbjct: 71  VTPGSEEALEVLRHSTAHLMAQALKRLYGDVKFGVGPVIEGGFYYDFDMDEKVSSDDFDK 130

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK M++I+  +    ++ +S  +A+E F+   + YK+E++++IP  ENVTLY QGE+ D
Sbjct: 131 IEKTMKQIVNENYKIERKVVSRNEAKEFFK--DDPYKLELIDAIPEDENVTLYTQGEFTD 188

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG HV ST ++K+F KL+  AGAYWRGDSN  ML RIYGTA+  +++L  +L  LEE 
Sbjct: 189 LCRGVHVPSTSKIKEF-KLLSTAGAYWRGDSNNKMLQRIYGTAFFDKKDLKAHLQMLEER 247

Query: 242 EKRDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
            +RDHRK+ ++++LF +    G+G+  W   G  I + +  Y+  +++   Y+ + TP +
Sbjct: 248 RERDHRKIGKDLELFTNSQLVGAGLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVL 307

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +  L++ SGHWD Y+ +MF     D+T        L+PMNCP H+ ++N+   SYRELP
Sbjct: 308 ANVDLYKTSGHWDHYQEDMFPPMKLDET----EEMVLRPMNCPHHMMIYNNKPHSYRELP 363

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G+++R E SG++ GL RVRG T +D+H+F   +Q+  E  ++ N+I  +Y+DFG
Sbjct: 364 IRIAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVNMIQEVYEDFG 423

Query: 420 FEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           FE    +LS R      K +  D +W+ AE+++K  +D +       +     +GE AFY
Sbjct: 424 FEDYTFRLSYRDPEDKEKYMDDDEMWNKAESMLKEAVDEMG------LPYVEAIGEAAFY 477

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G++    T Q+DF LP RF   Y+ S  E+  PV+IHR V  ++ERF+
Sbjct: 478 GPKLDVQVKTAMGKEETLSTAQLDFLLPERFELTYIGSDGEQHRPVVIHRGVVSTMERFV 537

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             + E  KG  P WL+P Q  +  +      +YA+++ + LKS  + +E D RNE + YK
Sbjct: 538 AFLTEETKGAFPTWLAPKQVEIIPVNVDIHYDYARQLQDELKSQGVRVEIDDRNEKMGYK 597

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IRE  ++KIP  I+ GDKE     + +R++GS   + +   + I  L  E
Sbjct: 598 IREAQMQKIPYQIVVGDKEVENNEVNVRKYGSEDQESLEKDEFIWNLVDE 647


>gi|134301672|ref|YP_001121640.1| threonyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           WY96-3418]
 gi|166223343|sp|A4IX68|SYT_FRATW RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|134049449|gb|ABO46520.1| threonyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           WY96-3418]
          Length = 634

 Score =  656 bits (1691), Expect = 0.0,   Method: Composition-based stats.
 Identities = 298/643 (46%), Positives = 426/643 (66%), Gaps = 16/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            I + FPDGSI+ F       DVA+SIS SLAK  +A  I+ ++ D  D +     + +I
Sbjct: 1   MINIRFPDGSIREFEAGVNSLDVAKSISPSLAKATMAAYIDDQLKDAKDAINSNCELRLI 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +DP  L ++RHSCAH++A AV+ ++P  +V IGP++++GFYYDF  ++     +L  I
Sbjct: 61  TVKDPEGLEILRHSCAHLLAHAVKELYPNTEVTIGPVVDNGFYYDFSFKESIGEADLPTI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EKKM+E+  + +P   + +   +A E F+++ E YKVEI++SI A E + +Y Q  + DL
Sbjct: 121 EKKMKELAKKSAPVSYRVVPKAEAIEFFKAQGENYKVEIIDSI-ADEQMKIYTQDNFSDL 179

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ +T  +K F KL K+AGAYWRG+S+  ML+RIYGT W T+++L QYL  LEE+E
Sbjct: 180 CRGPHIPNTSVLKAF-KLTKLAGAYWRGNSDNEMLTRIYGTCWATKEDLEQYLNMLEEAE 238

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KRDHRK+ + +DLFH  ED  G+ FWH  G +I++ +  YMR    K    EI TP + D
Sbjct: 239 KRDHRKIGKVLDLFHFQEDSPGIAFWHDNGVRIWRQVEDYMRASNNKYGCSEIRTPLIAD 298

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             LWQ+SGH   Y  NMFA K       + R FA++PMNCP  V V+N  L SYR+LP+R
Sbjct: 299 FSLWQKSGHASKYAENMFATK------SENRDFAIRPMNCPTCVQVYNTKLHSYRDLPIR 352

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AEFG V+RNEPSGSLHGL+RVR FTQDD H+FCT EQ+  E + +      +YKDFGF 
Sbjct: 353 MAEFGIVHRNEPSGSLHGLLRVRSFTQDDGHIFCTPEQVEEEVILMVQQCFEVYKDFGFN 412

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              +K++ RPE R+G D  WD +E ++K  LD       + ++  +L GEGAFYGPK E+
Sbjct: 413 DFAIKIALRPENRIGDDETWDKSEQMLKNALDA------NNVSYELLPGEGAFYGPKIEF 466

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            LKDAIGR WQCGTIQ+DF++P R  A Y++ + EK  PVM+HRA+ GS+ERFIG++IE+
Sbjct: 467 HLKDAIGRSWQCGTIQLDFSMPQRLGATYIDKNGEKQVPVMLHRAIVGSLERFIGMLIEH 526

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + GNLPLWL+P+Q  V  I+++  +Y +E+  +L+ + +  + D RNE I +KIREH++ 
Sbjct: 527 YAGNLPLWLAPVQVAVMGISNNQDDYCKEVFIMLEKNGIRAKLDLRNEKIGFKIREHTLL 586

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           ++P ++I G  E  ++ I IR+       ++S+ D    L K+
Sbjct: 587 RVPYLVILGKNEQEQKIITIRKHSGEDLGQMSVDDFCAFLDKQ 629


>gi|332358692|gb|EGJ36515.1| threonine--tRNA ligase [Streptococcus sanguinis SK355]
          Length = 647

 Score =  656 bits (1691), Expect = 0.0,   Method: Composition-based stats.
 Identities = 254/651 (39%), Positives = 408/651 (62%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  +  +G+IEI+
Sbjct: 1   MIKITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGAIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQ 121
           TP+   +L ++RHS AH+ A+A + ++P++ + +GP I+DGFYYD D E    S+++L +
Sbjct: 61  TPDHEDALDILRHSAAHLFAQAARRLFPDIHLGVGPAIQDGFYYDTDNEAGQISNEDLPR 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWF 180
           IE++M++I+  + P +++ ++ ++AR++F+   + YK+E++E     E  +T+YRQGE+ 
Sbjct: 121 IEEEMKKIVKENFPSIREEVTKDEARDIFK--NDPYKLELIEEHSEDEGGLTIYRQGEYV 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ R+YGTAW  +++L +YL   EE
Sbjct: 179 DLCRGPHVPSTGRIQIFHLL-NVAGAYWRGNSDNAMMQRVYGTAWFDKKDLKKYLQMREE 237

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           +++RDHRKL +E+DLF I+++   G+ FW   G  + + L  Y+  +++   Y+ + TP 
Sbjct: 238 AKERDHRKLGKELDLFMISQEVGQGLPFWLPNGATVRRELERYIVDKELASGYQHVYTPP 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L++ SGHW+ Y+ +MF          D   F L+PMNCP H+ V+ H + SYREL
Sbjct: 298 LASVELYKTSGHWEHYQEDMFPTMDMG----DGEEFVLRPMNCPHHIQVYKHHVHSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y DF
Sbjct: 354 PIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYADF 413

Query: 419 GFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
              +   +LS R      K   +D +W++A+ +++  LD +       ++     GE AF
Sbjct: 414 NLTEYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAF 467

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K A+G +    TIQ+DF LP RF+  YV +  E+  PVMIHR V  ++ERF
Sbjct: 468 YGPKLDIQVKTALGNEETLSTIQLDFLLPERFDLKYVGADGEEHRPVMIHRGVISTMERF 527

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINY 593
             I+IEN+KG  P WL+P Q  +  +++   ++YA ++A  L+   +  + D RNE + Y
Sbjct: 528 TAILIENYKGAFPTWLAPHQVTLIPVSNEAHIDYAWQVAKKLRDKGVRADVDERNEKMQY 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR     KIP  +I GDKE  + ++ +RR+G   T  + + + +  +  +
Sbjct: 588 KIRASQTSKIPYQLIVGDKEVEDGTVNVRRYGQKETHTIPVDEFVEQILAD 638


>gi|304406649|ref|ZP_07388304.1| threonyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
 gi|304344182|gb|EFM10021.1| threonyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
          Length = 645

 Score =  656 bits (1691), Expect = 0.0,   Method: Composition-based stats.
 Identities = 255/649 (39%), Positives = 399/649 (61%), Gaps = 21/649 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           I++T PDG+++ +   AT  DVA SIS+ L K AVA  I+GKV D+  P+  +  +EI+T
Sbjct: 3   IQVTLPDGAVREYESGATIDDVAGSISKGLQKNAVAGKIDGKVVDIYTPIEADAKVEIVT 62

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPE--VQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
            +    L V RHS AH+MA+A++ ++    V++ IGP+IEDGFYYD D EQ  + ++L +
Sbjct: 63  LDSADGLEVYRHSTAHLMAQAIKRLYGNTAVKLGIGPVIEDGFYYDIDLEQSLTPEDLVK 122

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK+M +I+  D P  ++ +  E+A   F    +  K+E++  +P    +T+Y QGE+FD
Sbjct: 123 IEKEMAKIVKEDLPIRRRVVGREEAIATFTELGDPLKLELIRDLPENVELTIYDQGEFFD 182

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ STG++K F KL+ +AGAYWRGDS   ML RIYGTA+  Q +L ++L+FLEE+
Sbjct: 183 LCRGPHLPSTGRIKAF-KLLSIAGAYWRGDSKNKMLQRIYGTAFPKQAQLDEHLHFLEEA 241

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQV 299
           +KRDHRKL RE+ +F  + +   G+  W   G ++ +T+  Y+    +   Y  + TP +
Sbjct: 242 KKRDHRKLGRELKMFTFSREVGQGLPLWLPNGARVRRTMERYIVDLEERLGYSHVYTPVL 301

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +  L++ SGHW+ Y  +MF     D+         L+PMNCP H+ V+   ++SYR+LP
Sbjct: 302 ANVELYKISGHWEHYSEDMFPPMALDN-----EELVLRPMNCPHHMMVYKSDMRSYRDLP 356

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G+++R E SG+L GL RVR  T +DAH+FC  +Q+  E  ++ NLI  +Y DFG
Sbjct: 357 IRVAELGTMHRYEMSGALTGLHRVRAMTLNDAHIFCRPDQIKEEFARVINLIRQVYADFG 416

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
            ++   +LS R  +        D +W+ ++ +++ V++ ++      +      GE AFY
Sbjct: 417 IKEYRFRLSYRDPQDTEKYFPDDNMWEMSQRMLREVVEELE------LPFFEAEGEAAFY 470

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G++    T Q+DF LP RF   YV    +K  PV+IHR +  ++ER  
Sbjct: 471 GPKLDVQIKTALGKEETLSTAQLDFLLPERFELEYVGDDGKKHRPVVIHRGIISTMERMT 530

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
             ++ENF G LPLWLSP+ A V  ++S+   YA+E+   L +  +  E+D RNE + YKI
Sbjct: 531 AYLLENFAGALPLWLSPMHARVIPVSSAYDGYAREVEEKLLAAGVRAESDLRNEKLGYKI 590

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           RE  ++K+P ++I GD EA   ++ +R+ G        + + I +LT+E
Sbjct: 591 REAQLEKLPYMLIVGDNEAQAGTVSVRKRGEGDIGSKEVSELIALLTEE 639


>gi|254489788|ref|ZP_05102983.1| threonyl-tRNA synthetase [Methylophaga thiooxidans DMS010]
 gi|224464873|gb|EEF81127.1| threonyl-tRNA synthetase [Methylophaga thiooxydans DMS010]
          Length = 673

 Score =  656 bits (1691), Expect = 0.0,   Method: Composition-based stats.
 Identities = 297/648 (45%), Positives = 434/648 (66%), Gaps = 15/648 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           IK+  PDGS + F    +   +A+SI   LA+  +A  ING++ D    +  +  + IIT
Sbjct: 12  IKIRLPDGSQRTFDRPVSIQGIAKSIGEGLARSTIAGKINGELHDACTMIHHDADVTIIT 71

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+DP  + +IRHS AH+   AV+ ++P  ++ IGP+IEDGFYYD D E  F+ D+LA I+
Sbjct: 72  PKDPEGIEIIRHSTAHLFGHAVKQLFPATRMVIGPVIEDGFYYDIDSEHRFTPDDLASIQ 131

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-ENVTLYRQGEWFDL 182
           ++M+ +       + +      AR LFE++ E YKV +++ +    +NV LY   E+ D+
Sbjct: 132 QRMETLANTAYDVVLKKTPKADARALFEARGETYKVRLIDEMDDDVKNVGLYYHQEYVDM 191

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +    K F    K+AGAYWRGD+N  ML RIYGTAW+ ++ L  YL+ +EE+E
Sbjct: 192 CRGPHVPNMAFCKAFSLT-KLAGAYWRGDANNEMLQRIYGTAWSDKKALKAYLHQMEEAE 250

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KRDHR+L +++DLFH  E+  G +FWH KGW+I Q LI+Y+RR + ++ Y E+N+P V+D
Sbjct: 251 KRDHRRLGKQLDLFHFQEEAPGSVFWHHKGWQILQELIAYLRRRQQQEGYIEVNSPDVMD 310

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW +YR +MF  + A     D R FALKPMNCPG V ++   L SYR+LP+R
Sbjct: 311 RSLWETSGHWQNYRDHMFTTETA-----DGRFFALKPMNCPGSVLLYRQNLTSYRDLPIR 365

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           ++EFG V+R EPSG+LHGL+RVR FTQDDAH++CT+ QM +EC+     I+ +Y   GF 
Sbjct: 366 MSEFGKVHRYEPSGTLHGLLRVRHFTQDDAHIYCTQSQMQDECMSAIRFILDVYDQLGFH 425

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            I +KLSTRPE R+G+D  WD  E  +   L+ +K      ++     GEGAFYGPK E+
Sbjct: 426 DIKIKLSTRPEHRIGTDETWDLLEETLIESLNELK------LDYQTNPGEGAFYGPKLEF 479

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
           +L+DAI RDWQCGT+QVD NLP RF+  YV+++  K  PVM+HRA+FGS+ERFIGI++E+
Sbjct: 480 VLQDAIKRDWQCGTLQVDMNLPERFDLDYVDNNGLKQRPVMLHRALFGSLERFIGILLEH 539

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           ++G LP+WL PIQ ++  I+ +   Y +++A +L+ H L + TD R+E I YKIR+H+++
Sbjct: 540 YEGKLPVWLMPIQLVICAISDANATYVEQLATVLRYHGLRVSTDTRSEKIGYKIRQHTLQ 599

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPD 649
           +IP I + GDKE +  ++ IR+    T   +S+ + I  L++ +  PD
Sbjct: 600 RIPYIAVAGDKEQASNTLSIRQQNGDTMGSLSIKETINTLSEAAQKPD 647


>gi|315026573|gb|EFT38505.1| threonyl-tRNA synthetase [Enterococcus faecalis TX2137]
          Length = 660

 Score =  656 bits (1691), Expect = 0.0,   Method: Composition-based stats.
 Identities = 259/651 (39%), Positives = 401/651 (61%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +TFPDG++K F    T  DVA+SIS SLAKKA+A   NG + DL  P+  +GS+EI+
Sbjct: 17  SIHITFPDGAVKPFDSGITTFDVAKSISNSLAKKALAGKFNGVLIDLDRPIVEDGSLEIV 76

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
           TP+   +L ++RHS AH+MA A++ ++P ++  +GP I+ GFYYD D  E P ++++L  
Sbjct: 77  TPDHEDALGILRHSAAHLMANALRRLFPNIKFGVGPAIDSGFYYDTDNGESPVTAEDLPA 136

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE +M +I+  ++P +++ +S  +A EL     + YKVE++  +P  E +T+Y QG++ D
Sbjct: 137 IEAEMMKIVKENNPIVRKEISRAEALEL--FADDPYKVELITDLPEDEIITVYDQGDFVD 194

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG HV STG+++ F KL+ VAGAYWRG+S+  M+ RIYGTA+  +++L +++   EE+
Sbjct: 195 LCRGVHVPSTGRIQVF-KLLSVAGAYWRGNSDNHMMQRIYGTAFFDKKDLKEFIKMREEA 253

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF ++++ GSG+ FW  KG  I +T+  Y+  ++I   Y+ + TP +
Sbjct: 254 KERDHRKLGKELDLFMVSQEVGSGLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIM 313

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            D  L++ SGHWD Y  +MF          D     L+PMNCP H+ V+ + + SYRELP
Sbjct: 314 ADVELYKTSGHWDHYHEDMFPPMDMG----DGEMLVLRPMNCPHHMMVYKNDIHSYRELP 369

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  +   L++++Y DF 
Sbjct: 370 IRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVAVYADFN 429

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R           DA+W+ A+ ++K  +D ++      ++     GE AFY
Sbjct: 430 ITDYRFRLSYRDPNNTDKYFDDDAMWEKAQAMLKAAMDELE------LDYFEAEGEAAFY 483

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK-CHPVMIHRAVFGSIERF 534
           GPK +  +K A+G +    TIQ+DF LP RF+  YV    E    PV+IHR +  ++ERF
Sbjct: 484 GPKLDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTMERF 543

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           +  + E +KG  P WL+PIQA +  ++  +  EYA EI   L++  L +E D RNE + Y
Sbjct: 544 VAYLTEVYKGAFPTWLAPIQATIIPVSVEAHSEYAYEIKERLQAQGLRVEVDDRNEKMGY 603

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR    +K+P  ++ GDKE  + ++ +RR+GS  T    L   I  +  E
Sbjct: 604 KIRASQTQKVPYQLVVGDKEMEDATVNVRRYGSKETSVEDLSIFIDSMAAE 654


>gi|315171869|gb|EFU15886.1| threonyl-tRNA synthetase [Enterococcus faecalis TX1342]
          Length = 660

 Score =  655 bits (1690), Expect = 0.0,   Method: Composition-based stats.
 Identities = 259/651 (39%), Positives = 401/651 (61%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +TFPDG++K F    T  DVA+SIS SLAKKA+A   NG + DL  P+  +GS+EI+
Sbjct: 17  SIHITFPDGAVKPFDSGVTTFDVAKSISNSLAKKALAGKFNGVLIDLDRPIVEDGSLEIV 76

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
           TP+   +L ++RHS AH+MA A++ ++P ++  +GP I+ GFYYD D  E P ++++L  
Sbjct: 77  TPDHENALGILRHSSAHLMANALRRLFPNIKFGVGPAIDSGFYYDTDNGESPVTAEDLPA 136

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE +M +I+  ++P +++ +S  +A EL     + YKVE++  +P  E +T+Y QG++ D
Sbjct: 137 IEAEMMKIVKENNPIVRKEISRAEALEL--FADDPYKVELITDLPEDEIITVYDQGDFVD 194

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG HV STG+++ F KL+ VAGAYWRG+S+  M+ RIYGTA+  +++L +++   EE+
Sbjct: 195 LCRGVHVPSTGRIQVF-KLLSVAGAYWRGNSDNHMMQRIYGTAFFDKKDLKEFIKMREEA 253

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF ++++ GSG+ FW  KG  I +T+  Y+  ++I   Y+ + TP +
Sbjct: 254 KERDHRKLGKELDLFMVSQEVGSGLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIM 313

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            D  L++ SGHWD Y  +MF          D     L+PMNCP H+ V+ + + SYRELP
Sbjct: 314 ADVELYKTSGHWDHYHEDMFPPMDMG----DGEMLVLRPMNCPHHMMVYKNDIHSYRELP 369

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  +   L++++Y DF 
Sbjct: 370 IRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVAVYADFN 429

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R           DA+W+ A+ ++K  +D ++      ++     GE AFY
Sbjct: 430 ITDYRFRLSYRDPNNTDKYFDDDAMWEKAQAMLKAAMDELE------LDYFEAEGEAAFY 483

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK-CHPVMIHRAVFGSIERF 534
           GPK +  +K A+G +    TIQ+DF LP RF+  YV    E    PV+IHR +  ++ERF
Sbjct: 484 GPKLDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTMERF 543

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           +  + E +KG  P WL+PIQA +  ++  +  EYA EI   L++  L +E D RNE + Y
Sbjct: 544 VAYLTEVYKGAFPTWLAPIQATIIPVSVEAHSEYAYEIKERLQAQGLRVEVDDRNEKMGY 603

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR    +K+P  ++ GDKE  + ++ +RR+GS  T    L   I  +  E
Sbjct: 604 KIRASQTQKVPYQLVVGDKEMEDATVNVRRYGSKETSVEDLSIFIDSMAAE 654


>gi|293569265|ref|ZP_06680563.1| threonyl-tRNA synthetase [Enterococcus faecium E1071]
 gi|291587971|gb|EFF19821.1| threonyl-tRNA synthetase [Enterococcus faecium E1071]
          Length = 646

 Score =  655 bits (1690), Expect = 0.0,   Method: Composition-based stats.
 Identities = 262/651 (40%), Positives = 402/651 (61%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            IK+TFPDG++K F    T   +AESIS+SLAKKA+A  +NGK+ DL+ P+  + SIEII
Sbjct: 1   MIKITFPDGAVKEFESGTTTLAIAESISKSLAKKALAGKVNGKLVDLTRPIEEDASIEII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQ 121
           TP+   +L ++RHS AH+MA+A++ ++P +   +GP I+ GFYYD D  Q   ++++L  
Sbjct: 61  TPDHEDALGLVRHSAAHLMAQAMRRLYPNIHFGVGPAIDSGFYYDTDNGQNQVTAEDLPA 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE +M +I+  + P  ++ LS ++A E+     + YKVE++  +P +E +T Y+QGE+ D
Sbjct: 121 IEAEMMKIVKENLPIERRVLSKQEALEI--FASDPYKVELINELPEEEVITAYQQGEFID 178

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++ F KL+ VAGAYWRG+SN  M+ R+YGTA+  ++ L +Y+   EE+
Sbjct: 179 LCRGPHVPSTGRIQVF-KLLSVAGAYWRGNSNNQMMQRVYGTAFFDKKALKEYIRLREEA 237

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF ++ + GSG+ FW  KG  I +T+  Y+  +++   Y+ + TP +
Sbjct: 238 KERDHRKLGKELDLFMVSPEVGSGLPFWLPKGATIRRTIERYIVDKEVSLGYQHVYTPIM 297

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            D  L++ SGHWD Y+ +MF          D     L+PMNCP H+ V+ + + SYRELP
Sbjct: 298 GDVELYKTSGHWDHYQEDMFPPMDMG----DGEMLVLRPMNCPHHMMVYKNTIHSYRELP 353

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  +   L++++Y DF 
Sbjct: 354 IRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVAVYADFN 413

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R           DA+W+ A+ ++K  +D ++      ++     GE AFY
Sbjct: 414 ITDYRFRLSYRDPNNTDKYFDDDAMWEKAQAMLKAAMDELE------LDYFEAEGEAAFY 467

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK-CHPVMIHRAVFGSIERF 534
           GPK +  +K A+G +    TIQ+DF LP RF+  YV    E    PV+IHR +  ++ERF
Sbjct: 468 GPKLDVQVKTALGTEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTMERF 527

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           +  + E +KG  P WL+PIQA +  ++  +  +YA EI   L+   L +E D RNE + Y
Sbjct: 528 VAYLTEVYKGAFPTWLAPIQATIIPVSVDAHGDYAYEIKERLQMKGLRVEVDDRNEKMGY 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR    +KIP  ++ GDKE  + ++ +RR+GS  T    L   I  +  E
Sbjct: 588 KIRASQTQKIPYQLVVGDKELEDATVNVRRYGSKETAVEDLNIFIDAMEAE 638


>gi|293556705|ref|ZP_06675269.1| threonyl-tRNA synthetase [Enterococcus faecium E1039]
 gi|291601167|gb|EFF31455.1| threonyl-tRNA synthetase [Enterococcus faecium E1039]
          Length = 646

 Score =  655 bits (1690), Expect = 0.0,   Method: Composition-based stats.
 Identities = 263/651 (40%), Positives = 402/651 (61%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEII 62
            IK+TFPDG++K F    T   +AESIS+SLAKKA+A  +NGK+ DL+ P+ E  SIEII
Sbjct: 1   MIKITFPDGAVKEFESGTTTLAIAESISKSLAKKALAGKVNGKLVDLTRPIEENASIEII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQ 121
           TP+   +L ++RHS AH+MA+A++ ++P +   +GP I+ GFYYD D  Q   ++++L  
Sbjct: 61  TPDHEDALGLVRHSAAHLMAQAMRRLYPNIHFGVGPAIDSGFYYDTDNGQNQVTAEDLPA 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE +M +I+  + P  ++ LS ++A E+     + YKVE++  +P +E +T Y+QGE+ D
Sbjct: 121 IEAEMMKIVKENLPIERRVLSKQEALEI--FASDPYKVELISELPEEEVITAYQQGEFID 178

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++ F KL+ VAGAYWRG+SN  M+ R+YGTA+  ++ L +Y+   EE+
Sbjct: 179 LCRGPHVPSTGRIQVF-KLLSVAGAYWRGNSNNQMMQRVYGTAFFDKKALKEYIRLREEA 237

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF ++ + GSG+ FW  KG  I +T+  Y+  +++   Y+ + TP +
Sbjct: 238 KERDHRKLGKELDLFMVSPEVGSGLPFWLPKGATIRRTIERYIVDKEVSLGYQHVYTPIM 297

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            D  L++ SGHWD Y+ +MF          D     L+PMNCP H+ V+ + + SYRELP
Sbjct: 298 GDVELYKTSGHWDHYQEDMFPPMDMG----DGEMLVLRPMNCPHHMMVYKNTIHSYRELP 353

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  +   L++++Y DF 
Sbjct: 354 IRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVAVYADFN 413

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R           DA+W+ A+ ++K  +D ++      ++     GE AFY
Sbjct: 414 ITDYRFRLSYRDPNNTDKYFDDDAMWEKAQAMLKAAMDELE------LDYFEAEGEAAFY 467

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK-CHPVMIHRAVFGSIERF 534
           GPK +  +K A+G +    TIQ+DF LP RF+  YV    E    PV+IHR +  ++ERF
Sbjct: 468 GPKLDVQVKTALGTEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTMERF 527

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           +  + E +KG  P WL+PIQA +  ++  +  +YA EI   L+   L +E D RNE + Y
Sbjct: 528 VAYLTEVYKGAFPTWLAPIQATIIPVSVDAHGDYAYEIKERLQMKGLRVEVDDRNEKMGY 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR    +KIP  ++ GDKE  + ++ +RR+GS  T    L   I  +  E
Sbjct: 588 KIRASQTQKIPYQLVVGDKELEDATVNVRRYGSKETAVEDLNIFIDAMEAE 638


>gi|293382457|ref|ZP_06628392.1| threonine--tRNA ligase [Enterococcus faecalis R712]
 gi|293387159|ref|ZP_06631720.1| threonine--tRNA ligase [Enterococcus faecalis S613]
 gi|312906512|ref|ZP_07765514.1| threonyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
 gi|312910456|ref|ZP_07769302.1| threonyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
 gi|291080141|gb|EFE17505.1| threonine--tRNA ligase [Enterococcus faecalis R712]
 gi|291083430|gb|EFE20393.1| threonine--tRNA ligase [Enterococcus faecalis S613]
 gi|310627455|gb|EFQ10738.1| threonyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
 gi|311289228|gb|EFQ67784.1| threonyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
          Length = 660

 Score =  655 bits (1690), Expect = 0.0,   Method: Composition-based stats.
 Identities = 258/651 (39%), Positives = 400/651 (61%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +TFPDG++K F    T  DVA+SIS SLAKKA+A   NG + DL  P+  +GS+EI+
Sbjct: 17  SIHITFPDGAVKPFDSGVTTFDVAKSISNSLAKKALAGKFNGVLIDLDRPIVEDGSLEIV 76

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
           TP+   +L ++RHS AH+MA A++ ++P ++  +GP I+ GFYYD D  E P ++++   
Sbjct: 77  TPDHEDALGILRHSSAHLMANALRRLFPNIKFGVGPAIDSGFYYDTDNGESPVTAEDFPA 136

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE +M +I+  ++P +++ +S  +A EL     + YKVE++  +P  E +T+Y QG++ D
Sbjct: 137 IEAEMMKIVKENNPIVRKEISRAEALEL--FADDPYKVELITDLPEDEIITIYDQGDFVD 194

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG HV STG+++ F KL+ VAGAYWRG+S+  M+ RIYGTA+  +++L +++   EE+
Sbjct: 195 LCRGVHVPSTGRIQVF-KLLSVAGAYWRGNSDNHMMQRIYGTAFFDKKDLKEFIKMREEA 253

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF ++++ GSG+ FW  KG  I +T+  Y+  ++I   Y+ + TP +
Sbjct: 254 KERDHRKLGKELDLFMVSQEVGSGLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIM 313

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            D  L++ SGHWD Y  +MF          D     L+PMNCP H+ V+ + + SYRELP
Sbjct: 314 ADVELYKTSGHWDHYHEDMFPPMDMG----DGEMLVLRPMNCPHHMMVYKNDIHSYRELP 369

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  +   L++++Y DF 
Sbjct: 370 IRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVAVYADFN 429

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R           DA+W+ A+ ++K  +D ++      ++     GE AFY
Sbjct: 430 ITDYRFRLSYRDPNNTDKYFDDDAMWEKAQAMLKAAMDELE------LDYFEAEGEAAFY 483

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK-CHPVMIHRAVFGSIERF 534
           GPK +  +K A+G +    TIQ+DF LP RF+  YV    E    PV+IHR +  ++ERF
Sbjct: 484 GPKLDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTMERF 543

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           +  + E +KG  P WL+PIQA +  ++  +  EYA EI   L++  L +E D RNE + Y
Sbjct: 544 VAYLTEVYKGAFPTWLAPIQATIIPVSVEAHSEYAYEIKERLQAQGLRVEVDDRNEKMGY 603

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR    +K+P  ++ GDKE  + ++ +RR+GS  T    L   I  +  E
Sbjct: 604 KIRASQTQKVPYQLVVGDKEMEDATVNVRRYGSKETSVEDLSIFIDSMAAE 654


>gi|218961058|ref|YP_001740833.1| threonyl-tRNA synthetase [Candidatus Cloacamonas acidaminovorans]
 gi|167729715|emb|CAO80627.1| threonyl-tRNA synthetase [Candidatus Cloacamonas acidaminovorans]
          Length = 633

 Score =  655 bits (1690), Expect = 0.0,   Method: Composition-based stats.
 Identities = 280/644 (43%), Positives = 407/644 (63%), Gaps = 15/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+T PDGSI+ +    T   +AE IS  LA++A+   +N K+ D++ P+  + ++ I 
Sbjct: 1   MIKITLPDGSIREYSAPVTALKIAEDISPKLAEEAICAEVNNKMVDINYPIDTDATVVIH 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T    +   V  HS AH+MA+AV+ ++PEV++AIGP IE GFYYDFD+++PF+ ++L +I
Sbjct: 61  TFHTEKGKEVYWHSTAHLMAQAVKQLFPEVKIAIGPAIEQGFYYDFDRDEPFTEEDLQKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E KMQE+  +  P+ +  LS E+A +LF    E YK+E+LE IP  E ++ YRQG++ DL
Sbjct: 121 EAKMQELSTQALPYYRTELSKEEAIKLFSEMNETYKLELLEDIPEGEIISSYRQGDFIDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+  TG++K   KL++ +GAYWRGD    ML RIYG ++ T++ELT YL+FLEE+ 
Sbjct: 181 CRGPHLPDTGKIK-AIKLLRTSGAYWRGDEKNKMLKRIYGISFPTEKELTDYLHFLEEAS 239

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           KRDHRKL ++++LF I+++ G G++ WH KG  +   + +Y +   +K  Y+ + TP + 
Sbjct: 240 KRDHRKLGKDLELFSISDEVGPGLVLWHPKGAMVRHLIETYWKEQHLKKGYQLVYTPHLG 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
             +LW+ SGH D Y+ NM++         + + + +KPMNCP H++++N  L SYRELP+
Sbjct: 300 RANLWETSGHLDFYKENMYSKMDI-----EGQDYYIKPMNCPFHISIYNSSLHSYRELPI 354

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLAE G+VYR E SG LHGLMRVRGFTQDDAH+ CT EQM  E  K+    + + K FGF
Sbjct: 355 RLAELGTVYRYERSGVLHGLMRVRGFTQDDAHIICTPEQMDMEVDKLIVFSLDMLKAFGF 414

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           ++ ++ L+T+P+  VG    WD A   +   L  +       +   V  G GAFYGPK +
Sbjct: 415 KEFLIYLATKPDDCVGEKEDWDKATASLANSLQKLG------LEYKVDEGGGAFYGPKID 468

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
             +KDA+GR WQC TIQ DFN P RF+  Y+ + +    P MIHRAV GS+ERF   ++E
Sbjct: 469 IKIKDALGRAWQCTTIQFDFNEPERFDMTYIGADNSAHRPYMIHRAVLGSVERFFATLLE 528

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              GNLPLWL+P+Q ++  IT + + YA++I   L       E D R+E + YKIR    
Sbjct: 529 YHSGNLPLWLAPVQIMLIPITDAQLNYARKIEEQLLEQGFRCELDSRSEKMGYKIRSAEK 588

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            KIP + I G  E +   + +R+        ++L  AI IL KE
Sbjct: 589 NKIPFMCILGKNEENNNQVTLRQHTVGDLGAMNLEAAIAILRKE 632


>gi|69245748|ref|ZP_00603614.1| Threonyl-tRNA synthetase, class IIa [Enterococcus faecium DO]
 gi|257880251|ref|ZP_05659904.1| threonyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257883051|ref|ZP_05662704.1| threonyl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|257891365|ref|ZP_05671018.1| threonyl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|257893638|ref|ZP_05673291.1| threonyl-tRNA synthetase [Enterococcus faecium 1,231,408]
 gi|258614441|ref|ZP_05712211.1| threonyl-tRNA synthetase [Enterococcus faecium DO]
 gi|260560451|ref|ZP_05832625.1| threonyl-tRNA synthetase [Enterococcus faecium C68]
 gi|293563269|ref|ZP_06677719.1| threonyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|294621403|ref|ZP_06700575.1| threonyl-tRNA synthetase [Enterococcus faecium U0317]
 gi|314939207|ref|ZP_07846461.1| threonyl-tRNA synthetase [Enterococcus faecium TX0133a04]
 gi|314942550|ref|ZP_07849386.1| threonyl-tRNA synthetase [Enterococcus faecium TX0133C]
 gi|314948402|ref|ZP_07851791.1| threonyl-tRNA synthetase [Enterococcus faecium TX0082]
 gi|314951256|ref|ZP_07854311.1| threonyl-tRNA synthetase [Enterococcus faecium TX0133A]
 gi|314991679|ref|ZP_07857149.1| threonyl-tRNA synthetase [Enterococcus faecium TX0133B]
 gi|314996805|ref|ZP_07861818.1| threonyl-tRNA synthetase [Enterococcus faecium TX0133a01]
 gi|68195641|gb|EAN10081.1| Threonyl-tRNA synthetase, class IIa [Enterococcus faecium DO]
 gi|257814479|gb|EEV43237.1| threonyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257818709|gb|EEV46037.1| threonyl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|257827725|gb|EEV54351.1| threonyl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|257830017|gb|EEV56624.1| threonyl-tRNA synthetase [Enterococcus faecium 1,231,408]
 gi|260073453|gb|EEW61781.1| threonyl-tRNA synthetase [Enterococcus faecium C68]
 gi|291599050|gb|EFF30095.1| threonyl-tRNA synthetase [Enterococcus faecium U0317]
 gi|291604721|gb|EFF34205.1| threonyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|313589100|gb|EFR67945.1| threonyl-tRNA synthetase [Enterococcus faecium TX0133a01]
 gi|313593770|gb|EFR72615.1| threonyl-tRNA synthetase [Enterococcus faecium TX0133B]
 gi|313596608|gb|EFR75453.1| threonyl-tRNA synthetase [Enterococcus faecium TX0133A]
 gi|313598686|gb|EFR77531.1| threonyl-tRNA synthetase [Enterococcus faecium TX0133C]
 gi|313641458|gb|EFS06038.1| threonyl-tRNA synthetase [Enterococcus faecium TX0133a04]
 gi|313645194|gb|EFS09774.1| threonyl-tRNA synthetase [Enterococcus faecium TX0082]
          Length = 646

 Score =  655 bits (1690), Expect = 0.0,   Method: Composition-based stats.
 Identities = 262/651 (40%), Positives = 402/651 (61%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            IK+TFPDG++K F    T   +AESIS+SLAKKA+A  +NGK+ DL+ P+  + SIEII
Sbjct: 1   MIKITFPDGAVKEFESGTTTLAIAESISKSLAKKALAGKVNGKLVDLTRPIEEDASIEII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQ 121
           TP+   +L ++RHS AH+MA+A++ ++P +   +GP I+ GFYYD D  Q   ++++L  
Sbjct: 61  TPDHEDALGLVRHSAAHLMAQAMRRLYPNIHFGVGPAIDSGFYYDTDNGQNQVTAEDLPA 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE +M +I+  + P  ++ LS ++A E+     + YKVE++  +P +E +T Y+QGE+ D
Sbjct: 121 IEAEMMKIVKENLPIERRVLSKQEALEI--FASDPYKVELISELPEEEVITAYQQGEFID 178

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++ F KL+ VAGAYWRG+SN  M+ R+YGTA+  ++ L +Y+   EE+
Sbjct: 179 LCRGPHVPSTGRIQVF-KLLSVAGAYWRGNSNNQMMQRVYGTAFFDKKALKEYIRLREEA 237

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF ++ + GSG+ FW  KG  I +T+  Y+  +++   Y+ + TP +
Sbjct: 238 KERDHRKLGKELDLFMVSPEVGSGLPFWLPKGATIRRTIERYIVDKEVSLGYQHVYTPIM 297

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            D  L++ SGHWD Y+ +MF          D     L+PMNCP H+ V+ + + SYRELP
Sbjct: 298 GDVELYKTSGHWDHYQEDMFPPMDMG----DGEMLVLRPMNCPHHMMVYKNTIHSYRELP 353

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  +   L++++Y DF 
Sbjct: 354 IRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVAVYADFN 413

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R           DA+W+ A+ ++K  +D ++      ++     GE AFY
Sbjct: 414 ITDYRFRLSYRDPNNTDKYFDDDAMWEKAQAMLKAAMDELE------LDYFEAEGEAAFY 467

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK-CHPVMIHRAVFGSIERF 534
           GPK +  +K A+G +    TIQ+DF LP RF+  YV    E    PV+IHR +  ++ERF
Sbjct: 468 GPKLDVQVKTALGTEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTMERF 527

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           +  + E +KG  P WL+PIQA +  ++  +  +YA EI   L+   L +E D RNE + Y
Sbjct: 528 VAYLTEVYKGAFPTWLAPIQATIIPVSVDAHGDYAYEIKERLQMKGLRVEVDDRNEKMGY 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR    +KIP  ++ GDKE  + ++ +RR+GS  T    L   I  +  E
Sbjct: 588 KIRASQTQKIPYQLVVGDKELEDATVNVRRYGSKETAVEDLNIFIDAMEAE 638


>gi|307286857|ref|ZP_07566939.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0109]
 gi|306502072|gb|EFM71358.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0109]
 gi|315156485|gb|EFU00502.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0043]
 gi|315166285|gb|EFU10302.1| threonyl-tRNA synthetase [Enterococcus faecalis TX1302]
 gi|315169145|gb|EFU13162.1| threonyl-tRNA synthetase [Enterococcus faecalis TX1341]
          Length = 660

 Score =  655 bits (1690), Expect = 0.0,   Method: Composition-based stats.
 Identities = 259/651 (39%), Positives = 401/651 (61%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +TFPDG++K F    T  DVA+SIS SLAKKA+A   NG + DL  P+  +GS+EI+
Sbjct: 17  SIHITFPDGAVKPFDSGITTFDVAKSISNSLAKKALAGKFNGVLIDLDRPIVEDGSLEIV 76

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
           TP+   +L ++RHS AH+MA A++ ++P ++  +GP I+ GFYYD D  E P ++++L  
Sbjct: 77  TPDHEDALGILRHSAAHLMANALRRLFPNIKFGVGPAIDSGFYYDTDNGESPVTAEDLPA 136

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE +M +I+  ++P +++ +S  +A EL     + YKVE++  +P  E +T+Y QG++ D
Sbjct: 137 IEAEMMKIVKENNPIVRKEISRAEALEL--FADDPYKVELITDLPEDEIITVYDQGDFVD 194

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG HV STG+++ F KL+ VAGAYWRG+S+  M+ RIYGTA+  +++L +++   EE+
Sbjct: 195 LCRGVHVPSTGRIQVF-KLLSVAGAYWRGNSDNHMMQRIYGTAFFDKKDLKEFIKMREEA 253

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF ++++ GSG+ FW  KG  I +T+  Y+  ++I   Y+ + TP +
Sbjct: 254 KERDHRKLGKELDLFMVSQEVGSGLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIM 313

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            D  L++ SGHWD Y  +MF          D     L+PMNCP H+ V+ + + SYRELP
Sbjct: 314 ADVELYKTSGHWDHYHEDMFPPMDMG----DGEMLVLRPMNCPHHMMVYKNDIHSYRELP 369

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  +   L++++Y DF 
Sbjct: 370 IRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVAVYADFN 429

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R           DA+W+ A+ ++K  +D ++      ++     GE AFY
Sbjct: 430 ITDYRFRLSYRDPNNTDKYFDDDAMWEKAQAMLKAAMDELE------LDYFEAEGEAAFY 483

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK-CHPVMIHRAVFGSIERF 534
           GPK +  +K A+G +    TIQ+DF LP RF+  YV    E    PV+IHR +  ++ERF
Sbjct: 484 GPKLDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTMERF 543

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           +  + E +KG  P WL+PIQA +  ++  +  EYA EI   L++  L +E D RNE + Y
Sbjct: 544 VAYLTEVYKGAFPTWLAPIQATIIPVSVEAHSEYAYEIKERLQAQGLRVEVDDRNEKMGY 603

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR    +K+P  ++ GDKE  + ++ +RR+GS  T    L   I  +  E
Sbjct: 604 KIRASQTQKVPYQLVVGDKEMEDATVNVRRYGSKETSVEDLSIFIDSMAAE 654


>gi|326800360|ref|YP_004318179.1| threonyl-tRNA synthetase [Sphingobacterium sp. 21]
 gi|326551124|gb|ADZ79509.1| threonyl-tRNA synthetase [Sphingobacterium sp. 21]
          Length = 641

 Score =  655 bits (1690), Expect = 0.0,   Method: Composition-based stats.
 Identities = 261/651 (40%), Positives = 400/651 (61%), Gaps = 19/651 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            IK+T PDGSI+ +    T   +A+SIS  LA+  +A  ++G+V D + P+  + S+ ++
Sbjct: 1   MIKITLPDGSIREYEKGITSLQIAQSISEGLARNVLAAEVDGQVWDATRPIEKDASVRLL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
           T  D    +   HS AH+MAEA+++++P  +  IGP IE GFYYD D  ++PFSSD+  +
Sbjct: 61  TWNDKDGKSTFWHSSAHLMAEALEALYPGTKFGIGPAIETGFYYDVDFGDRPFSSDDFKK 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE KM E+    S +++Q +S   A   F  K + YK+++++ + A  ++T Y QG + D
Sbjct: 121 IEDKMLELARTKSDYVRQQVSKSDALAYFTEKGDEYKLDLIKDL-ADGSITFYTQGNFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ +TG +K   KL  VAGAYWRGD +R  L+RIYG  +    EL  YL+ +EE+
Sbjct: 180 LCRGPHIPNTGFIK-AIKLTNVAGAYWRGDESRKQLTRIYGVTFPKASELADYLHMIEEA 238

Query: 242 EKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           +KRDHRKL +E++LF  +   G G+  W  KG  + Q L+ +++R ++K  YE + TP +
Sbjct: 239 KKRDHRKLGKELELFAFSERVGMGLPLWLPKGAALRQKLVDFLQRAQMKAGYEPVVTPHI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             ++L+  SGH++ Y A+ F       T ++   F LKPMNCP H  ++    +SY++LP
Sbjct: 299 GHKNLYVTSGHYEKYGADSFQ---PIRTPQEGEEFLLKPMNCPHHCEIYKTKPRSYKDLP 355

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           VR AEFG+VYR E SG LHGL RVRGFTQDDAH+FC  +Q+ +E  K+ +L++ ++K  G
Sbjct: 356 VRFAEFGTVYRYEQSGELHGLTRVRGFTQDDAHLFCRPDQVKDEFKKVIDLVLYVFKALG 415

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           F+    ++S R  +     +GS+  W      +      ++ + +  + T   LGE AFY
Sbjct: 416 FDDYTAQISLRDPENKGKYIGSEENW------LLAEAAIVEAAEEKGLKTVTELGEAAFY 469

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDA+GR WQ GTIQVD+NLP RF   Y  S ++K  PVMIHRA FGS+ERF+
Sbjct: 470 GPKLDFMVKDALGRKWQLGTIQVDYNLPERFELEYTGSDNQKHRPVMIHRAPFGSLERFV 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE+  G  PLWL+P Q I+  ++    EYA+++   L +  +    D R+E +  KI
Sbjct: 530 AVLIEHCAGEFPLWLTPEQFIILPVSEKYEEYAKKLLESLNNTDIRGLIDLRDEKVGRKI 589

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           R+  +KKIP ++I G+KE    +I +R+ G      +++      L +E  
Sbjct: 590 RDAEVKKIPYMLIVGEKEVENGTISVRKHGEGDLGSMTIEAFSKQLIEEIT 640


>gi|256963904|ref|ZP_05568075.1| threonyl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|256954400|gb|EEU71032.1| threonyl-tRNA synthetase [Enterococcus faecalis HIP11704]
          Length = 645

 Score =  655 bits (1690), Expect = 0.0,   Method: Composition-based stats.
 Identities = 258/651 (39%), Positives = 401/651 (61%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +TFPDG++K F    T  DVA+SIS SLAKKA+A   NG + DL  P+  +GS+EI+
Sbjct: 2   SIHITFPDGAVKPFDSGVTTFDVAKSISNSLAKKALAGKFNGVLIDLDRPIVEDGSLEIV 61

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
           TP+   +L ++RHS AH+MA A++ ++P ++  +GP I+ GFYYD D  E P ++++L  
Sbjct: 62  TPDHEDALGILRHSSAHLMANALRRLFPNIKFGVGPAIDSGFYYDTDNGESPVTAEDLPA 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE +M +I+  ++P +++ +S  +A E+     + YKVE++  +P  E +T+Y QG++ D
Sbjct: 122 IEAEMMKIVKENNPIVRKEISRAEALEV--FADDPYKVELITDLPEDEIITIYDQGDFVD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG HV STG+++ F KL+ VAGAYWRG+S+  M+ RIYGTA+  +++L +++   EE+
Sbjct: 180 LCRGVHVPSTGRIQVF-KLLSVAGAYWRGNSDNHMMQRIYGTAFFDKKDLKEFIKMREEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF ++++ GSG+ FW  KG  I +T+  Y+  ++I   Y+ + TP +
Sbjct: 239 KERDHRKLGKELDLFMVSQEVGSGLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIM 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            D  L++ SGHWD Y  +MF          D     L+PMNCP H+ V+ + + SYRELP
Sbjct: 299 ADVELYKTSGHWDHYHEDMFPPMDMG----DGEMLVLRPMNCPHHMMVYKNDIHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  +   L++++Y DF 
Sbjct: 355 IRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVAVYADFN 414

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R           DA+W+ A+ ++K  +D ++      ++     GE AFY
Sbjct: 415 ITDYRFRLSYRDPNNTDKYFDDDAMWEKAQAMLKAAMDELE------LDYFEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK-CHPVMIHRAVFGSIERF 534
           GPK +  +K A+G +    TIQ+DF LP RF+  YV    E    PV+IHR +  ++ERF
Sbjct: 469 GPKLDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTMERF 528

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           +  + E +KG  P WL+PIQA +  ++  +  EYA EI   L++  L +E D RNE + Y
Sbjct: 529 VAYLTEVYKGAFPTWLAPIQATIIPVSVEAHSEYAYEIKERLQAQGLRVEVDDRNEKMGY 588

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR    +K+P  ++ GDKE  + ++ +RR+GS  T    L   I  +  E
Sbjct: 589 KIRASQTQKVPYQLVVGDKEMEDATVNVRRYGSKETSVEDLSIFIDSMAAE 639


>gi|227554282|ref|ZP_03984329.1| threonyl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|229544818|ref|ZP_04433543.1| threonyl-tRNA synthetase [Enterococcus faecalis TX1322]
 gi|307289786|ref|ZP_07569723.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0411]
 gi|227176572|gb|EEI57544.1| threonyl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|229310090|gb|EEN76077.1| threonyl-tRNA synthetase [Enterococcus faecalis TX1322]
 gi|306499171|gb|EFM68649.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0411]
 gi|315030800|gb|EFT42732.1| threonyl-tRNA synthetase [Enterococcus faecalis TX4000]
 gi|315575247|gb|EFU87438.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0309B]
 gi|315582393|gb|EFU94584.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0309A]
          Length = 660

 Score =  655 bits (1690), Expect = 0.0,   Method: Composition-based stats.
 Identities = 259/651 (39%), Positives = 401/651 (61%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +TFPDG++K F    T  DVA+SIS SLAKKA+A   NG + DL  P+  +GS+EI+
Sbjct: 17  SIHITFPDGAVKPFDSGITTFDVAKSISNSLAKKALAGKFNGVLIDLDRPIVEDGSLEIV 76

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
           TP+   +L ++RHS AH+MA A++ ++P ++  +GP I+ GFYYD D  E P ++++L  
Sbjct: 77  TPDHEDALGILRHSSAHLMANALRRLFPNIKFGVGPAIDSGFYYDTDNGESPVTAEDLPA 136

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE +M +I+  ++P +++ +S  +A EL     + YKVE++  +P  E +T+Y QG++ D
Sbjct: 137 IEAEMMKIVKENNPIVRKEISRAEALEL--FADDPYKVELITDLPEDEIITVYDQGDFVD 194

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG HV STG+++ F KL+ VAGAYWRG+S+  M+ RIYGTA+  +++L +++   EE+
Sbjct: 195 LCRGVHVPSTGRIQVF-KLLSVAGAYWRGNSDNHMMQRIYGTAFFDKKDLKEFIKMREEA 253

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF ++++ GSG+ FW  KG  I +T+  Y+  ++I   Y+ + TP +
Sbjct: 254 KERDHRKLGKELDLFMVSQEVGSGLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIM 313

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            D  L++ SGHWD Y  +MF          D     L+PMNCP H+ V+ + + SYRELP
Sbjct: 314 ADVELYKTSGHWDHYHEDMFPPMDMG----DGEMLVLRPMNCPHHMMVYKNDIHSYRELP 369

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  +   L++++Y DF 
Sbjct: 370 IRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVAVYADFN 429

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R           DA+W+ A+ ++K  +D ++      ++     GE AFY
Sbjct: 430 ITDYRFRLSYRDPNNTDKYFDDDAMWEKAQAMLKAAMDELE------LDYFEAEGEAAFY 483

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK-CHPVMIHRAVFGSIERF 534
           GPK +  +K A+G +    TIQ+DF LP RF+  YV    E    PV+IHR +  ++ERF
Sbjct: 484 GPKLDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTMERF 543

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           +  + E +KG  P WL+PIQA +  ++  +  EYA EI   L++  L +E D RNE + Y
Sbjct: 544 VAYLTEVYKGAFPTWLAPIQATIIPVSVEAHSEYAYEIKERLQAQGLRVEVDDRNEKMGY 603

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR    +K+P  ++ GDKE  + ++ +RR+GS  T    L   I  +  E
Sbjct: 604 KIRASQTQKVPYQLVVGDKEMEDATVNVRRYGSKETSVEDLSIFIDSMAAE 654


>gi|148994898|ref|ZP_01823919.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
 gi|148997679|ref|ZP_01825243.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
 gi|149006698|ref|ZP_01830384.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74]
 gi|149021279|ref|ZP_01835525.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
 gi|168483499|ref|ZP_02708451.1| threonyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
 gi|168487280|ref|ZP_02711788.1| threonyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00]
 gi|168488656|ref|ZP_02712855.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|168491490|ref|ZP_02715633.1| threonyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
 gi|168575182|ref|ZP_02721145.1| threonyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
 gi|169834472|ref|YP_001695022.1| threonyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
 gi|225859387|ref|YP_002740897.1| threonyl-tRNA synthetase [Streptococcus pneumoniae 70585]
 gi|225861459|ref|YP_002742968.1| threonyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
 gi|298229236|ref|ZP_06962917.1| threonyl-tRNA synthetase [Streptococcus pneumoniae str. Canada
           MDR_19F]
 gi|298254509|ref|ZP_06978095.1| threonyl-tRNA synthetase [Streptococcus pneumoniae str. Canada
           MDR_19A]
 gi|307068259|ref|YP_003877225.1| threonyl-tRNA synthetase [Streptococcus pneumoniae AP200]
 gi|307127841|ref|YP_003879872.1| threonyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
 gi|238688351|sp|B1I703|SYT_STRPI RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|254783538|sp|C1C8M1|SYT_STRP7 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|254783543|sp|C1CSP6|SYT_STRZT RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|147756178|gb|EDK63220.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
 gi|147761613|gb|EDK68577.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74]
 gi|147926966|gb|EDK78011.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
 gi|147930380|gb|EDK81364.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
 gi|168996974|gb|ACA37586.1| threonyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
 gi|172043101|gb|EDT51147.1| threonyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
 gi|183569836|gb|EDT90364.1| threonyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00]
 gi|183572780|gb|EDT93308.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|183574162|gb|EDT94690.1| threonyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
 gi|183578687|gb|EDT99215.1| threonyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
 gi|225720074|gb|ACO15928.1| threonyl-tRNA synthetase [Streptococcus pneumoniae 70585]
 gi|225727271|gb|ACO23122.1| threonyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
 gi|306409796|gb|ADM85223.1| Threonyl-tRNA synthetase [Streptococcus pneumoniae AP200]
 gi|306484903|gb|ADM91772.1| threonyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
 gi|327389816|gb|EGE88161.1| threonyl-tRNA synthetase [Streptococcus pneumoniae GA04375]
 gi|332072464|gb|EGI82947.1| threonyl-tRNA synthetase [Streptococcus pneumoniae GA17570]
 gi|332072798|gb|EGI83279.1| threonyl-tRNA synthetase [Streptococcus pneumoniae GA17545]
 gi|332073965|gb|EGI84443.1| threonyl-tRNA synthetase [Streptococcus pneumoniae GA41301]
 gi|332199661|gb|EGJ13736.1| threonyl-tRNA synthetase [Streptococcus pneumoniae GA41317]
 gi|332200192|gb|EGJ14265.1| threonyl-tRNA synthetase [Streptococcus pneumoniae GA47368]
          Length = 647

 Score =  655 bits (1690), Expect = 0.0,   Method: Composition-based stats.
 Identities = 263/651 (40%), Positives = 406/651 (62%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  +  +GSIEI+
Sbjct: 1   MINITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGSIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQ 121
           TP+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D      S+++L +
Sbjct: 61  TPDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNTAGQISNEDLPR 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWF 180
           IE++MQ+I+  + P +++ ++ ++ARE+F+   + YK+E++E     E  +T+YRQGE+ 
Sbjct: 121 IEEEMQKIVKENFPSIREEVTKDEAREIFK--NDPYKLELIEEHSEDEGGLTIYRQGEYV 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ RIYGTAW  +++L  YL   EE
Sbjct: 179 DLCRGPHVPSTGRIQIFHLLH-VAGAYWRGNSDNAMMQRIYGTAWFDKKDLKNYLQMREE 237

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           +++RDHRKL +E+DLF I+++   G+ FW   G  I + L  Y+  +++   Y+ + TP 
Sbjct: 238 AKERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVNKELASGYQHVYTPP 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L++ SGHWD Y+ +MF          D   F L+PMNCP H+ VF H + SYREL
Sbjct: 298 LASVELYKTSGHWDHYQEDMFPTMDMG----DGEEFVLRPMNCPHHIQVFKHHVHSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y+DF
Sbjct: 354 PIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYEDF 413

Query: 419 GFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
                  +LS R      K   +D +W++A+ +++  LD +       ++     GE AF
Sbjct: 414 NLTDYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAF 467

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K A+G++    TIQ+DF LP RF+  Y+ +  E   PVMIHR V  ++ERF
Sbjct: 468 YGPKLDIQIKTALGKEETLSTIQLDFLLPERFDLKYIGADGEDHRPVMIHRGVISTMERF 527

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
             I+IEN+KG  P WL+P Q  +  ++    V+YA E+A  L+   +  + D RNE + +
Sbjct: 528 TAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAKKLRDRGVRADVDERNEKMQF 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR     KIP  +I GDKE  + ++ +RR+G   TQ VS+ + +  +  +
Sbjct: 588 KIRASQTSKIPYQLIVGDKEMEDETVNVRRYGQKETQTVSVDNFVQAILAD 638


>gi|15901467|ref|NP_346071.1| threonyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
 gi|111657539|ref|ZP_01408280.1| hypothetical protein SpneT_02001261 [Streptococcus pneumoniae
           TIGR4]
 gi|149011514|ref|ZP_01832761.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
 gi|303253984|ref|ZP_07340104.1| threonyl-tRNA synthetase [Streptococcus pneumoniae BS455]
 gi|303258557|ref|ZP_07344537.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
 gi|303262647|ref|ZP_07348587.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
 gi|303263586|ref|ZP_07349508.1| threonyl-tRNA synthetase [Streptococcus pneumoniae BS397]
 gi|303266970|ref|ZP_07352845.1| threonyl-tRNA synthetase [Streptococcus pneumoniae BS457]
 gi|303269866|ref|ZP_07355610.1| threonyl-tRNA synthetase [Streptococcus pneumoniae BS458]
 gi|22654131|sp|Q97PI4|SYT_STRPN RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|14973120|gb|AAK75711.1| threonyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
 gi|147764504|gb|EDK71435.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
 gi|301802334|emb|CBW35088.1| threonyl-tRNA synthetase [Streptococcus pneumoniae INV200]
 gi|302599072|gb|EFL66098.1| threonyl-tRNA synthetase [Streptococcus pneumoniae BS455]
 gi|302636203|gb|EFL66698.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
 gi|302640058|gb|EFL70513.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
 gi|302640601|gb|EFL71004.1| threonyl-tRNA synthetase [Streptococcus pneumoniae BS458]
 gi|302643487|gb|EFL73759.1| threonyl-tRNA synthetase [Streptococcus pneumoniae BS457]
 gi|302646624|gb|EFL76849.1| threonyl-tRNA synthetase [Streptococcus pneumoniae BS397]
          Length = 647

 Score =  655 bits (1690), Expect = 0.0,   Method: Composition-based stats.
 Identities = 263/651 (40%), Positives = 406/651 (62%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  +  +GSIEI+
Sbjct: 1   MINITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGSIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQ 121
           TP+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D      S+++L +
Sbjct: 61  TPDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNTAGQISNEDLPR 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWF 180
           IE++MQ+I+  + P +++ ++ ++ARE+F+   + YK+E++E     E  +T+YRQGE+ 
Sbjct: 121 IEEEMQKIVKENFPSIREEVTKDEAREIFK--NDPYKLELIEEHSEDEGGLTIYRQGEYV 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ RIYGTAW  +++L  YL   EE
Sbjct: 179 DLCRGPHVPSTGRIQIFHLLH-VAGAYWRGNSDNAMMQRIYGTAWFDKKDLKNYLQMREE 237

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           +++RDHRKL +E+DLF I+++   G+ FW   G  I + L  Y+  +++   Y+ + TP 
Sbjct: 238 AKERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVNKELVSGYQHVYTPP 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L++ SGHWD Y+ +MF          D   F L+PMNCP H+ VF H + SYREL
Sbjct: 298 LASVELYKTSGHWDHYQEDMFPTMDMG----DGEEFVLRPMNCPHHIQVFKHHVHSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y+DF
Sbjct: 354 PIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYEDF 413

Query: 419 GFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
                  +LS R      K   +D +W++A+ +++  LD +       ++     GE AF
Sbjct: 414 NLTDYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAF 467

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K A+G++    TIQ+DF LP RF+  Y+ +  E   PVMIHR V  ++ERF
Sbjct: 468 YGPKLDIQIKTALGKEETLSTIQLDFLLPERFDLKYIGADGEDHRPVMIHRGVISTMERF 527

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
             I+IEN+KG  P WL+P Q  +  ++    V+YA E+A  L+   +  + D RNE + +
Sbjct: 528 TAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAKKLRDRGVRADVDERNEKMQF 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR     KIP  +I GDKE  + ++ +RR+G   TQ VS+ + +  +  +
Sbjct: 588 KIRASQTSKIPYQLIVGDKEMEDETVNVRRYGQKETQTVSVDNFVQAILAD 638


>gi|261208968|ref|ZP_05923373.1| threonyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289565220|ref|ZP_06445672.1| threonyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|294615018|ref|ZP_06694907.1| threonyl-tRNA synthetase [Enterococcus faecium E1636]
 gi|260077007|gb|EEW64729.1| threonyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289163041|gb|EFD10889.1| threonyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|291592149|gb|EFF23769.1| threonyl-tRNA synthetase [Enterococcus faecium E1636]
          Length = 647

 Score =  655 bits (1690), Expect = 0.0,   Method: Composition-based stats.
 Identities = 262/651 (40%), Positives = 402/651 (61%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            IK+TFPDG++K F    T   +AESIS+SLAKKA+A  +NGK+ DL+ P+  + SIEII
Sbjct: 1   MIKITFPDGAVKEFESGTTTLAIAESISKSLAKKALAGKVNGKLVDLTRPIEEDASIEII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQ 121
           TP+   +L ++RHS AH+MA+A++ ++P +   +GP I+ GFYYD D  Q   ++++L  
Sbjct: 61  TPDHEDALGLVRHSAAHLMAQAMRRLYPNIHFGVGPAIDSGFYYDTDNGQNQVTAEDLPA 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE +M +I+  + P  ++ LS ++A E+     + YKVE++  +P +E +T Y+QGE+ D
Sbjct: 121 IEAEMMKIVKENLPIERRVLSKQEALEI--FASDPYKVELISELPEEEVITAYQQGEFID 178

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++ F KL+ VAGAYWRG+SN  M+ R+YGTA+  ++ L +Y+   EE+
Sbjct: 179 LCRGPHVPSTGRIQVF-KLLSVAGAYWRGNSNNQMMQRVYGTAFFDKKALKEYIRLREEA 237

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF ++ + GSG+ FW  KG  I +T+  Y+  +++   Y+ + TP +
Sbjct: 238 KERDHRKLGKELDLFMVSPEVGSGLPFWLPKGATIRRTIERYIVDKEVSLGYQHVYTPIM 297

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            D  L++ SGHWD Y+ +MF          D     L+PMNCP H+ V+ + + SYRELP
Sbjct: 298 GDVELYKTSGHWDHYQEDMFPPMDMG----DGEMLVLRPMNCPHHMMVYKNTIHSYRELP 353

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  +   L++++Y DF 
Sbjct: 354 IRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVAVYADFN 413

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R           DA+W+ A+ ++K  +D ++      ++     GE AFY
Sbjct: 414 ITDYRFRLSYRDPNNTDKYFDDDAMWEKAQAMLKAAMDELE------LDYFEAEGEAAFY 467

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK-CHPVMIHRAVFGSIERF 534
           GPK +  +K A+G +    TIQ+DF LP RF+  YV    E    PV+IHR +  ++ERF
Sbjct: 468 GPKLDVQVKTALGTEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTMERF 527

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           +  + E +KG  P WL+PIQA +  ++  +  +YA EI   L+   L +E D RNE + Y
Sbjct: 528 VAYLTEVYKGAFPTWLAPIQATIIPVSVDAHGDYAYEIKERLQMKGLRVEVDDRNEKMGY 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR    +KIP  ++ GDKE  + ++ +RR+GS  T    L   I  +  E
Sbjct: 588 KIRASQTQKIPYQLVVGDKELEDATVNVRRYGSKETAVEDLNIFIDAMEAE 638


>gi|315158985|gb|EFU03002.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0312]
          Length = 660

 Score =  655 bits (1690), Expect = 0.0,   Method: Composition-based stats.
 Identities = 259/651 (39%), Positives = 401/651 (61%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +TFPDG++K F    T  DVA+SIS SLAKKA+A   NG + DL  P+  +GS+EI+
Sbjct: 17  SIHITFPDGAVKPFDSGITTFDVAKSISNSLAKKALAGKFNGVLIDLDRPIVEDGSLEIV 76

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
           TP+   +L ++RHS AH+MA A++ ++P ++  +GP I+ GFYYD D  E P ++++L  
Sbjct: 77  TPDHEDALGILRHSSAHLMANALRRLFPNIKFGVGPAIDSGFYYDTDNGESPVTAEDLPA 136

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE +M +I+  ++P +++ +S  +A EL     + YKVE++  +P  E +T+Y QG++ D
Sbjct: 137 IEAEMMKIVKENNPIVRKEISRAEALEL--FADDPYKVELITDLPEDEIITVYDQGDFVD 194

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG HV STG+++ F KL+ VAGAYWRG+S+  M+ RIYGTA+  +++L +++   EE+
Sbjct: 195 LCRGVHVPSTGRIQVF-KLLSVAGAYWRGNSDNHMMQRIYGTAFFDKKDLKEFIKMREEA 253

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF ++++ GSG+ FW  KG  I +T+  Y+  ++I   Y+ + TP +
Sbjct: 254 KERDHRKLGKELDLFMVSQEVGSGLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIM 313

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            D  L++ SGHWD Y  +MF          D     L+PMNCP H+ V+ + + SYRELP
Sbjct: 314 ADVELYKTSGHWDHYHEDMFPPMDMG----DGEMLVLRPMNCPHHMMVYKNDIHSYRELP 369

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  +   L++++Y DF 
Sbjct: 370 IRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVAVYADFN 429

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R           DA+W+ A+ ++K  +D ++      ++     GE AFY
Sbjct: 430 ITDYRFRLSYRDPNNTDKYFDDDAMWEKAQAMLKAAMDELE------LDYFEAEGEAAFY 483

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK-CHPVMIHRAVFGSIERF 534
           GPK +  +K A+G +    TIQ+DF LP RF+  YV    E    PV+IHR +  ++ERF
Sbjct: 484 GPKLDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTMERF 543

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           +  + E +KG  P WL+PIQA +  ++  +  EYA EI   L++  L +E D RNE + Y
Sbjct: 544 VAYLTEVYKGAFPTWLAPIQATIIPVSVEAHSEYAYEIKERLQAQGLRVEVDDRNEKMGY 603

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR    +K+P  ++ GDKE  + ++ +RR+GS  T    L   I  +  E
Sbjct: 604 KIRASQTQKVPYQLVVGDKEMEDATVNVRRYGSKETSVEDLSIFIDSMAAE 654


>gi|228993303|ref|ZP_04153219.1| Threonyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
 gi|228766371|gb|EEM15014.1| Threonyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
          Length = 643

 Score =  655 bits (1689), Expect = 0.0,   Method: Composition-based stats.
 Identities = 248/652 (38%), Positives = 401/652 (61%), Gaps = 20/652 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           M   +K+ FPDG++K FP   T  ++A SIS  L KKAVA  +N ++ DL  P+  +G++
Sbjct: 1   MADVVKIIFPDGAVKEFPKGTTTEEIAASISPGLKKKAVAGKLNDEMIDLRTPIEEDGAV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +    L ++RHS AH++A+A++ ++ +V++ IGP+IE+GFYYD D E+  + ++ 
Sbjct: 61  SIITLDSEDGLYILRHSTAHLLAQALKRLYKDVKLGIGPVIENGFYYDIDMEEAITVEDF 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IEK+MQ+I+  +   ++  +   +A   +E   +  K+E++  +P    +++Y QGE+
Sbjct: 121 PKIEKEMQKIVNENLEIVRHEVPRAEALRRYEEIGDELKLELINDLPEDAIISIYEQGEF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           +DLCRG H+ STG++K F KL+ VAGAYWRGDSN  ML RIYGTA+  + EL ++L  LE
Sbjct: 181 YDLCRGVHLPSTGKIKMF-KLLSVAGAYWRGDSNNKMLQRIYGTAFVKKAELDEHLRMLE 239

Query: 240 ESEKRDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTP 297
           E+++RDHRKL +E+ LF +  + G G+  W  KG  I + +  Y+  ++    Y+ + TP
Sbjct: 240 EAKERDHRKLGKELKLFTNSQKVGQGLPLWLPKGATIRRIIERYIVDKEASLGYDHVYTP 299

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +  + L++ SGHW+ YR  MF     D+         L+PMNCP H+ V+ + + SYRE
Sbjct: 300 VLGSRELYETSGHWNHYRDGMFPSMEMDN-----EELVLRPMNCPHHMMVYKNDIHSYRE 354

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+  E  ++ NL + +YKD
Sbjct: 355 LPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVYKD 414

Query: 418 FGFEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           FG E    +LS R      K    D +W+ A++++K  +D +       +      GE A
Sbjct: 415 FGLENYSFRLSYRDPEDTKKYYADDEMWEKAQSMLKEAMDEMG------LEYYEAEGEAA 468

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  ++ A+G+D    T+Q+DF LP RF   YV    +   PV+IHR V  ++ER
Sbjct: 469 FYGPKLDVQVRTALGKDETLSTVQLDFLLPERFELTYVGEDGKPHRPVVIHRGVVSTMER 528

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETIN 592
           F+  +IE +KG  P WL+P+Q  V  ++    ++YA+++   L+   + +E D R E I 
Sbjct: 529 FVAFLIEEYKGAFPTWLAPVQVQVIPVSPQVHLDYAKKVQEDLQRAGIRVEVDTREEKIG 588

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           YKIRE  ++KIP +++ GD E +E  + +R++G   ++ ++L   + ++  E
Sbjct: 589 YKIREAQMQKIPYMLVVGDNEVAENGVNVRKYGEQKSETIALDAFVDMIKVE 640


>gi|332523222|ref|ZP_08399474.1| threonine--tRNA ligase [Streptococcus porcinus str. Jelinkova 176]
 gi|332314486|gb|EGJ27471.1| threonine--tRNA ligase [Streptococcus porcinus str. Jelinkova 176]
          Length = 648

 Score =  655 bits (1689), Expect = 0.0,   Method: Composition-based stats.
 Identities = 266/651 (40%), Positives = 402/651 (61%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            IK+TFPDG+++ F    T  +VA+SIS SLAKKA+A   NG + D + P+  +GSIEI+
Sbjct: 1   MIKITFPDGAVREFESGITTFEVAQSISNSLAKKALAGKFNGHLVDTNRPLEEDGSIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQ 121
           TP+   +  V+RHS AH+ A+A + ++P++ + +GP I DGFYYD D +    S+++L +
Sbjct: 61  TPDHEDAFDVLRHSAAHLFAQATKRLFPDIHLGVGPAIADGFYYDTDNQAGQISNEDLPR 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKE-NVTLYRQGEWF 180
           IE++M++I+  + P +++ +S E+A E+F+   + YKVE++E        +T+YRQGE+ 
Sbjct: 121 IEEEMKKIVKENHPCIREEVSKEEALEIFK--GDPYKVELIEEHSDDAAGLTIYRQGEFV 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ R+YGTAW  +++L  YL  LEE
Sbjct: 179 DLCRGPHVPSTGRIQVFHLL-NVAGAYWRGNSDNAMMQRVYGTAWFDKKDLKAYLTRLEE 237

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           +++RDHRKL +E+DLF +  +   G+ FW   G  I +TL  Y+  +++   Y+ + TP 
Sbjct: 238 AKERDHRKLGKELDLFMVNPEVGQGLPFWLPNGATIRRTLERYITDKELASGYQHVYTPP 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +     ++ SGHWD YR +MF          D   F L+PMNCP H+ V+ H + SYREL
Sbjct: 298 MASVDFYKTSGHWDHYRDDMFPTMDMG----DGEEFVLRPMNCPHHIEVYKHHVHSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  T +D H+F T EQ+  E  +   LII +Y+DF
Sbjct: 354 PIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHLFVTPEQIQEEFQRALQLIIDVYEDF 413

Query: 419 GFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
                  +LS R          +D +W+ A++++K  LD +       ++     GE AF
Sbjct: 414 NLTDYRFRLSYRDPNDTEKYFDNDEMWEKAQSMLKAALDEMG------VDYFEAEGEAAF 467

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K A+G +    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF
Sbjct: 468 YGPKLDIQVKTALGNEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMIHRGVISTMERF 527

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINY 593
             I+IE +KG  P WL+P Q  V  I++   V+YA E+A +L+   +  + D RNE + Y
Sbjct: 528 TAILIETYKGAFPTWLAPHQVTVIPISNEAHVDYAWEVAKILRDKGVRADVDERNEKMQY 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR     KIP  +I GDKE  E+S+ +RR+GS  T   ++   +  +  +
Sbjct: 588 KIRASQTSKIPYQLIVGDKEMEEKSVNVRRYGSKATHTETIEQFVETILAD 638


>gi|297583666|ref|YP_003699446.1| threonyl-tRNA synthetase [Bacillus selenitireducens MLS10]
 gi|297142123|gb|ADH98880.1| threonyl-tRNA synthetase [Bacillus selenitireducens MLS10]
          Length = 649

 Score =  655 bits (1689), Expect = 0.0,   Method: Composition-based stats.
 Identities = 255/651 (39%), Positives = 406/651 (62%), Gaps = 19/651 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           M   +KLTFPDG++K F   +T  DVA+SIS  L K AVA  +NG+  DL  P+  + +I
Sbjct: 1   MAEQVKLTFPDGNVKEFERGSTMEDVAQSISPGLKKNAVAGKVNGEPIDLRTPIEEDAAI 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EI+T +    L V+RHS AH+MA+AV+ ++ +V++ +GP+IE+GFYYD D E   + ++L
Sbjct: 61  EILTYDSKEGLEVLRHSTAHLMAQAVKRLFDDVKLGVGPVIEEGFYYDIDMEHKLTPEDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IEK+M++II  +    +  +  E+A   +E   +  K+E+LE IP  E +++Y QGE+
Sbjct: 121 PKIEKEMKKIIDENHEITRVEVPREEAVRRYEEIGDDLKLELLEDIPKGEQISIYEQGEF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRG HV  T ++KKF KL+ V GAYWRGDSN  ML RIYGTA+  Q+E+  YL  LE
Sbjct: 181 FDLCRGVHVPQTSKLKKF-KLLTVNGAYWRGDSNNKMLQRIYGTAFPKQKEVDDYLQLLE 239

Query: 240 ESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           E ++RDHRKL +E+ +F +++    G+  W  KG  + + +  Y+    +   Y+ + TP
Sbjct: 240 ERKERDHRKLGKELGIFAVSQKVGQGLPLWLPKGATVRRQVERYIVDIEERLGYDHVYTP 299

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    L++ SGHWD Y+ +MF V   D+         L+PMNCP H+ ++ +   SYR 
Sbjct: 300 VLGSVDLYKTSGHWDHYQDDMFPVLQMDN-----EDLVLRPMNCPHHMMIYKNEKHSYRN 354

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AE G+++R+E SG+L GL RVR  T +DAH+FC  +Q+ +E +++  LI ++YKD
Sbjct: 355 LPLRIAELGTMHRHEMSGALAGLQRVRAMTLNDAHIFCRPDQLKDEFIRVVELIQAVYKD 414

Query: 418 FGFEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           F  +    +LS R      K V +D +W+ A+ ++K  +D +       +      GE A
Sbjct: 415 FQIKDYYFRLSYRDPEDKEKYVDNDEMWEKAQAMLKEAVDEMG------VEYIEADGEAA 468

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  +K A+G+D    T+Q+DF+LP+RF+  Y     +   PV+IHR V  ++ER
Sbjct: 469 FYGPKLDVQVKTALGKDETLSTVQLDFHLPNRFDLTYTGEDGKDHRPVVIHRGVVSTMER 528

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           F+  ++E +KG  P WL+P+QA +  +    ++Y +++ + LK   + +  D RNE + Y
Sbjct: 529 FVAFLLEEYKGAFPTWLAPVQAELIPVNDVHLDYVRQVEDELKRAGVRVHVDVRNEKLGY 588

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIRE  ++K+P +++ GD+E    S+ +RR+G   +++VSL   +  +T++
Sbjct: 589 KIREAQMQKVPYLLVLGDQERDNASVNVRRYGQKDSEEVSLDVFVKSITED 639


>gi|120611523|ref|YP_971201.1| threonyl-tRNA synthetase [Acidovorax citrulli AAC00-1]
 gi|166223312|sp|A1TR39|SYT_ACIAC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|120589987|gb|ABM33427.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Acidovorax
           citrulli AAC00-1]
          Length = 639

 Score =  655 bits (1689), Expect = 0.0,   Method: Composition-based stats.
 Identities = 298/647 (46%), Positives = 436/647 (67%), Gaps = 19/647 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I++T PD S + +    + +DVA+SI   LAK  VA  ++G++ D SD +  +  ++II
Sbjct: 1   MIRITLPDNSQREYAGPVSVADVAQSIGPGLAKMTVAGKVDGRLVDASDVIDHDARLQII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TP D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ ++LA I
Sbjct: 61  TPWDQEGVEIIRHSCAHLVGHAVKQLYPTAKMVIGPVIEEGFYYDIAYERPFTPEDLAAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E++M+E+IA+D   +K+    ++  ++F  + E YK+ ++E +P ++ + LY   E+ D+
Sbjct: 121 EQRMKELIAQDYDVVKKMTPRDEVIQVFRERGEEYKLRLVEDMPDEKAMGLYYHQEYVDM 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +T  +K F KL +V+GAYWRGD+    L RIYGTAW  +++L  Y+  +EE+E
Sbjct: 181 CRGPHVPNTRFLKVF-KLTRVSGAYWRGDARNEQLQRIYGTAWADKKDLEAYVKRIEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD 301
           KRDHR+L RE+DLFHI E   G +FWH KGW I+Q +  YMR+  + + Y+E+  PQ+LD
Sbjct: 240 KRDHRRLGRELDLFHIDEHSPGTVFWHPKGWTIWQGVEQYMRQVYRDNGYQEVKGPQILD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           +HLW+++GHWD YR NMF       T  +   +ALKPMNCPGH+ +FN G+KSYR+LP+R
Sbjct: 300 KHLWEKTGHWDKYRENMFT------TESEKHDYALKPMNCPGHILIFNQGVKSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
             EFG  +RNEP+G LHG+MRVR FTQDD H+FCT++Q+  EC+    L+  +YKDFGF 
Sbjct: 354 YGEFGQCHRNEPTGGLHGIMRVRAFTQDDGHIFCTEDQIQQECINFTALLQKVYKDFGFT 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            I+ K++TRPEKR+GS+  WD AEN +   L           +  + +G+GAFYGPK EY
Sbjct: 414 DIIYKVATRPEKRIGSEESWDKAENALIESLKASGC------DYQIAVGDGAFYGPKLEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L+DAIGR WQCGTIQVD ++P R  A YV    ++  P+++HRA+ GS+ERFIGI+IE 
Sbjct: 468 TLRDAIGRHWQCGTIQVDPSMPERLGAEYVGEDGQRHRPIVLHRAIVGSLERFIGILIEQ 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSH----HLSIETDFRNETINYKIRE 597
             G LP+WL+P+Q  V  IT +  +Y +EIA  L+       L +E D RNE I YKIRE
Sbjct: 528 HAGALPVWLAPVQVAVLNITGAQDDYCREIAAKLQKALPNQGLRVELDLRNEKITYKIRE 587

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           HS++K+P I++ GDKE +  ++ +R  G+     + L   I ++ ++
Sbjct: 588 HSLQKLPYILVVGDKEKAAGAVAVRARGNRDLGVMPLEAFISLIGQD 634


>gi|94989937|ref|YP_598037.1| threonyl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
 gi|123258050|sp|Q1JI30|SYT_STRPD RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|94543445|gb|ABF33493.1| Threonyl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
          Length = 647

 Score =  655 bits (1689), Expect = 0.0,   Method: Composition-based stats.
 Identities = 271/660 (41%), Positives = 408/660 (61%), Gaps = 26/660 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            IK+TFPDG+++ F    T  D+AESIS+SLAKKA+A   N ++ D +  +  +GSIEI+
Sbjct: 1   MIKITFPDGAVREFESGVTTFDIAESISKSLAKKALAGKFNDQLIDTTRAIEEDGSIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQ 121
           TP+   +  V+RHS AH+ A+A + ++P + + +GP I +GFYYD D  E   S+++L  
Sbjct: 61  TPDHKDAYEVLRHSAAHLFAQAAKRLFPNLHLGVGPAIAEGFYYDTDNAEGQISNEDLPC 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE +MQ+I+  + P +++ ++ E+A ELF+   + YKVE++    A   +T+YRQGE+ D
Sbjct: 121 IEAEMQKIVTENYPCIREEVTKEEALELFK--DDPYKVELINE-HAGAGLTVYRQGEFVD 177

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ RIYGTAW  +++L  YL  LEE+
Sbjct: 178 LCRGPHVPSTGRIQVFHLL-NVAGAYWRGNSDNNMMQRIYGTAWFDKKDLKAYLTRLEEA 236

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+++   G+ FW   G  I +TL  Y+  +++   Y+ + TP +
Sbjct: 237 KERDHRKLGKELDLFMISQEVGQGLPFWLPDGATIRRTLERYITDKELASGYQHVYTPPL 296

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHWD Y+ +MF V        D   F L+PMNCP H+ V+ + ++SYRELP
Sbjct: 297 ASVELYKTSGHWDHYQEDMFPVMDMG----DGEEFVLRPMNCPHHIQVYKNHVRSYRELP 352

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  T +D H+F T EQ+  E  +   LII +Y DF 
Sbjct: 353 IRIAELGMMHRYEKSGALSGLQRVREMTLNDGHIFVTPEQIQEEFQRALQLIIDVYADFN 412

Query: 420 FEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R      K   +D +W++A++++K  LD +       ++     GE AFY
Sbjct: 413 LTDYRFRLSYRDPNDTHKYYDNDEMWENAQSMLKAALDEM------DVDYFEAEGEAAFY 466

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G +    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF 
Sbjct: 467 GPKLDIQVKTALGNEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMIHRGVISTMERFT 526

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IE +KG  P WL+P Q  V  I++   ++YA E+A  L+   +  + D RNE + YK
Sbjct: 527 AILIETYKGAFPTWLAPHQVTVIPISNEAHIDYAWEVAKTLRDRGVRADVDDRNEKMQYK 586

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE---SLPPDCQ 651
           IR     KIP  +I GDKE  ++S+ +RR+GS  T   S+ + +  +  +      PD Q
Sbjct: 587 IRASQTSKIPYQLIVGDKEMEDKSVNVRRYGSKATHTESVEEFVENILADIARKSRPDAQ 646


>gi|241668765|ref|ZP_04756343.1| threonyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254877296|ref|ZP_05250006.1| threonine-tRNA ligase [Francisella philomiragia subsp. philomiragia
           ATCC 25015]
 gi|254843317|gb|EET21731.1| threonine-tRNA ligase [Francisella philomiragia subsp. philomiragia
           ATCC 25015]
          Length = 635

 Score =  655 bits (1689), Expect = 0.0,   Method: Composition-based stats.
 Identities = 299/643 (46%), Positives = 422/643 (65%), Gaps = 15/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            I + FPDGSI+ F        +A+SIS SLAK  V   I+ K+ D  D +  +  + +I
Sbjct: 1   MINIKFPDGSIREFESGVNSLQIAKSISPSLAKITVGAYIDNKLSDAKDVINHDCELRLI 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   L ++RHSCAH++A AV+ ++P  +V IGP+I++GFYYDF  ++     +LA I
Sbjct: 61  TTKDTEGLEILRHSCAHLLANAVKELYPNTEVTIGPVIDNGFYYDFSFKETIGEADLANI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M+EI  +      + +S E A   F+++ E YKV+I+ESIPA + + +Y QG++ DL
Sbjct: 121 EKRMKEIAKKGISISYRVVSKEDAIAFFKAQGENYKVDIIESIPADQQIKIYTQGDFSDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV ST  +K F KL K+AGAYWRGDSN  ML+RIYGT W T+++L QYL+ LEE+E
Sbjct: 181 CRGPHVPSTAAIKAF-KLTKLAGAYWRGDSNNEMLTRIYGTCWATKEDLDQYLHMLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KRDHRK+ + +DLFH  ED  G+ FWH  G +I++ +  YMR    K    EI TP + D
Sbjct: 240 KRDHRKIGKALDLFHFQEDSPGIAFWHDSGVRIWREVEDYMRASNKKYGCGEIRTPLIAD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             LW++SGH   Y  NMFA K       + R FA++PMNCP  V V+N  L SYR+LP+R
Sbjct: 300 FSLWEKSGHASKYAENMFATK------SENRDFAIRPMNCPTCVQVYNTKLHSYRDLPIR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AEFG V+RNEPSGSLHGLMRVR FTQDD H+FC  EQ+  E + +      +YKDFGF 
Sbjct: 354 MAEFGIVHRNEPSGSLHGLMRVRSFTQDDGHIFCAPEQVEEEVILMVKQCFEVYKDFGFN 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              VK++ RPE R+G+D  WD +E ++K  LD       + +   +L GEGAFYGPK E+
Sbjct: 414 DFTVKIALRPENRIGNDETWDKSEQMLKNALDA------NNVAYELLPGEGAFYGPKIEF 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            LKDAIGR WQCGTIQ+DF++P R  A Y++ +  K  PVM+HRA+ GS+ERFIG++IE+
Sbjct: 468 HLKDAIGRSWQCGTIQLDFSMPDRLGATYIDKNGNKQVPVMLHRAIVGSLERFIGMLIEH 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + GN+PLWL+P+Q  V  I++   EY Q++   L+ + +  + D RNE I +KIREH++ 
Sbjct: 528 YAGNMPLWLTPVQVAVMGISNHQDEYCQKVFETLEKNGIRAKLDLRNEKIGFKIREHTLL 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           ++P ++I G  E  +  + +R+       ++S+ D    L ++
Sbjct: 588 RVPYLVILGKSEQEQEIVTVRKHNGEDLGQMSIGDFCAFLNEQ 630


>gi|255531804|ref|YP_003092176.1| threonyl-tRNA synthetase [Pedobacter heparinus DSM 2366]
 gi|255344788|gb|ACU04114.1| threonyl-tRNA synthetase [Pedobacter heparinus DSM 2366]
          Length = 641

 Score =  655 bits (1689), Expect = 0.0,   Method: Composition-based stats.
 Identities = 273/651 (41%), Positives = 403/651 (61%), Gaps = 19/651 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            I +T PDGS + +    T   +A SIS  LA+  +A  +NG+V D S P+  + +++++
Sbjct: 1   MINITLPDGSSRQYEKGTTAHQIALSISEGLARNVLAAEVNGEVWDSSRPIEGDATVKLL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
           T  D    A   HS AHIMAEA+++++P  +  IGP IE GFYYD D  ++ FSSD+  +
Sbjct: 61  TWNDQAGKATFWHSSAHIMAEALEALYPGTKFGIGPAIETGFYYDVDFGDREFSSDDFKE 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE K+ E+  +   F ++ +S   A + FE K + YK+++LE +     +T Y QGE+ D
Sbjct: 121 IEAKILELARQKEVFERKAVSKADAIKYFEEKGDEYKLDLLEGL-QDGKITFYTQGEFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ +TG VK   KLM VAGAYWRGD  R  L+RIYG  +    ELT+YL+ +EE+
Sbjct: 180 LCRGPHIPNTGFVK-AVKLMNVAGAYWRGDETRKQLTRIYGVTFPKASELTEYLHMIEEA 238

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           +KRDHRKL +E++LF  +E    G+  W  KG  + + L+ ++ R + K  YE++ TP +
Sbjct: 239 KKRDHRKLGKELELFAFSEKVGMGLPLWLPKGAALRERLVQFLTRAQAKAGYEQVVTPHI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             ++L+  SGH++ Y  + F       T ++   F LKPMNCP H  ++    +SY++LP
Sbjct: 299 GHKNLYITSGHYEKYGKDAFQ---PIKTPQEGEEFFLKPMNCPHHCEIYKTKPRSYKDLP 355

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R AEFG+VYR E SG LHGL RVRGFTQDDAH+FC  +Q+  E  K+ +L++ ++K  G
Sbjct: 356 LRFAEFGTVYRYEQSGELHGLTRVRGFTQDDAHLFCRPDQVKEEFKKVIDLVLYVFKSLG 415

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           F+    ++S R  +     +GSD  W  AE  +    D      +  + T V  GE AFY
Sbjct: 416 FDDYTAQVSLRDPENKAKYIGSDENWRLAETAIIEAAD------EKGLPTVVEYGEAAFY 469

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDA+GR WQ GTIQVD+NLP RF   Y  S ++K  PVMIHRA FGS+ERFI
Sbjct: 470 GPKLDFMVKDALGRKWQLGTIQVDYNLPERFELEYTGSDNQKHRPVMIHRAPFGSLERFI 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE+  GN PLWLSP Q I+  I+    +YA+++++ L +  +    DFR+E I  KI
Sbjct: 530 AVLIEHCAGNFPLWLSPEQFIILPISEKYEDYAKKVSDELNNSDIRGLIDFRDEKIGRKI 589

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           R+  +KKIP ++I G+KE +E    +R+ G     +++L +   +L KE  
Sbjct: 590 RDAEVKKIPYMLIIGEKEMAEGKASVRKHGEGDLGEMTLQEFSELLIKEIT 640


>gi|322411327|gb|EFY02235.1| threonyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           dysgalactiae ATCC 27957]
          Length = 647

 Score =  655 bits (1689), Expect = 0.0,   Method: Composition-based stats.
 Identities = 268/650 (41%), Positives = 408/650 (62%), Gaps = 23/650 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            IK+TFPDG+++ F    T  ++AESIS+SLAKKA+A   NG++ D +  +  +GSIEI+
Sbjct: 1   MIKITFPDGAVREFESGVTTFEIAESISKSLAKKALAGKFNGQLIDTTRAIEEDGSIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQ 121
           TP+   +  V+RHS AH+ A+A + ++P + + +GP I +GFYYD D  +   S+++L +
Sbjct: 61  TPDHEDAYDVLRHSAAHLFAQAAKRLFPNLHLGVGPAIAEGFYYDTDNADGQISNEDLPR 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE +MQ+I+  + P +++ ++ E+A ELF+   + YKVE++    A   +T+YRQGE+ D
Sbjct: 121 IEAEMQKIVKENYPCIREEVTKEEALELFK--DDPYKVELINE-HAGAGLTVYRQGEFVD 177

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ R+YGTAW  +++L  YL  LEE+
Sbjct: 178 LCRGPHVPSTGRIQVFRLL-NVAGAYWRGNSDNNMMQRVYGTAWFDKKDLKAYLTRLEEA 236

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF I+++   G+ FW   G  I +TL  Y+  +++   Y+ + TP +
Sbjct: 237 KERDHRKLGKELDLFMISQEVGQGLPFWLPDGATIRRTLERYITDKELASGYQHVYTPPL 296

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHW+ Y+ +MF V        D   F L+PMNCP H+ V+ + + SYRELP
Sbjct: 297 ASVELYKTSGHWEHYQEDMFPVMDMG----DGEEFVLRPMNCPHHIQVYKNHVHSYRELP 352

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  T +D H+F T EQ+ +E  +   LII +Y+DF 
Sbjct: 353 IRIAELGMMHRYEKSGALSGLQRVREMTLNDGHIFVTPEQIRDEFKRTLQLIIDVYEDFN 412

Query: 420 FEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R      K   +D +W++A+ ++KG +D +       ++     GE AFY
Sbjct: 413 LTDYRFRLSYRDPEDTHKYYDNDEMWENAQAMLKGAMDDMG------VDYFEAEGEAAFY 466

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G +    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF 
Sbjct: 467 GPKLDIQVKTALGNEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMIHRGVISTMERFT 526

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IE +KG  P WL+P Q  V  I++   ++YA EIA  L+   +  + D RNE + YK
Sbjct: 527 AILIETYKGAFPTWLAPHQVTVIPISNEAHIDYAWEIAKTLRDRGVRADVDDRNEKMQYK 586

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IR     KIP  +I GDKE  E+S+ +RR+GS  T   S+ D +  +  +
Sbjct: 587 IRASQTSKIPYQLIVGDKEMEEKSVNVRRYGSKATHTESVEDFVENILAD 636


>gi|306820889|ref|ZP_07454509.1| threonine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
 gi|304551003|gb|EFM38974.1| threonine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
          Length = 641

 Score =  655 bits (1689), Expect = 0.0,   Method: Composition-based stats.
 Identities = 270/643 (41%), Positives = 399/643 (62%), Gaps = 16/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEII 62
            +K+       +N+       DVA+ IS  LA+  V   INGKVCDL  P+ +   IE +
Sbjct: 1   MLKIRLQGKDERNYEKGILALDVAKDISEGLARSVVGAKINGKVCDLMTPLTDDCDIEFL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
              D     V  H+  HIMA+AV+ ++P  ++  GP +++GFYYD D E+  + ++L +I
Sbjct: 61  KFADKDGKMVFWHTSTHIMAQAVKRLYPNAKLGTGPALDNGFYYDIDLEEKLTVEDLEKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M+ I++     +++ +S  +A E+ +++ E YK+EI+  +P    ++LY+QGE+ DL
Sbjct: 121 EKEMKNIVSESLDIVRKEVSRNEAIEIMKNRNEDYKIEIINGLPEDATISLYQQGEFIDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPH+ +T  VK F KL  +AGAYWR D+N   L R+YG ++  ++EL +YL  LEE++
Sbjct: 181 CAGPHLPNTKYVKAF-KLTSIAGAYWRADANNKQLQRLYGISFEKKRELDEYLKLLEEAK 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD 301
            RDHRKL +E+DLF + E+G G  F+H KG  +  TL  + R + +   Y+EI TP +L+
Sbjct: 240 LRDHRKLGKELDLFSMHEEGPGFPFFHPKGMVLRNTLEKFWREEHEKAGYDEIKTPIILN 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW QSGHWD Y+ NM+  K       D   +A+KPMNCPG +  +   L SYR+LP+R
Sbjct: 300 EALWHQSGHWDHYKENMYFTKI------DGEDYAIKPMNCPGSILTYKTHLFSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
            AE G V+R+E SG+LHGLMRVR FTQDDAH++    Q+ +E + +  L   IY  F F+
Sbjct: 354 WAEMGQVHRHELSGALHGLMRVRTFTQDDAHLYVLPSQVKDELIGVIELADYIYSIFNFK 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPE  +G+   WD A N +   L+      +  I   V  G+GAFYGPK ++
Sbjct: 414 YH-VELSTRPENSMGTQEQWDIATNGLIAALE------EKNIKYIVNEGDGAFYGPKIDF 466

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L+DAIGR WQCGTIQ+DF +P RF+  Y++S++EK  PVM+HR VFGSIERFIGI+IE+
Sbjct: 467 HLQDAIGRTWQCGTIQLDFQMPERFDIHYIDSNNEKQRPVMLHRTVFGSIERFIGILIEH 526

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           F G  PLWLSP+Q  +  I+   ++YA E+ + LK   + +  D R E I +KIRE  ++
Sbjct: 527 FAGKFPLWLSPVQVKILPISDKFIDYAYEVQSELKKLGIRVNVDARAEKIGFKIREAQLE 586

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K+P +++ G+KE    ++ +R         +   + I    KE
Sbjct: 587 KVPYMLVIGEKEVENNTLSVRSRDLGDLGSMKKEEVIEKFVKE 629


>gi|306831875|ref|ZP_07465030.1| threonine--tRNA ligase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|304425801|gb|EFM28918.1| threonine--tRNA ligase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
          Length = 648

 Score =  654 bits (1688), Expect = 0.0,   Method: Composition-based stats.
 Identities = 265/661 (40%), Positives = 415/661 (62%), Gaps = 26/661 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            +K+TFPDG+++ F    T  ++A+SIS SLAKKA+A   NG++ D +  +  +GSIEI+
Sbjct: 1   MVKITFPDGAVREFESGVTPFEIAQSISNSLAKKALAGKFNGQLIDTTREITEDGSIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQ 121
           TP+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D +    S ++L +
Sbjct: 61  TPDHEDALGILRHSAAHLFAQAAKRLFPDLCLGVGPAIEDGFYYDTDNKAGQISDEDLPR 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWF 180
           IE++M++I+  + P +++ ++ ++ARELF+   + YK+E++E   A E  +T+Y QGE+ 
Sbjct: 121 IEEEMKKIVKENFPCIRKEITIDEARELFK--NDPYKLELIEEHGADEGGLTVYSQGEFT 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ R+YGTAW  +++L  YL   +E
Sbjct: 179 DLCRGPHVPSTGRIQVFHLL-NVAGAYWRGNSDNAMMQRVYGTAWFDKKDLKAYLKQRQE 237

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           +++RDHRKL +E+DLF I+++   G+ FW   G  I +TL  Y+  +++   Y  + TP 
Sbjct: 238 AKERDHRKLGKELDLFMISQEVGQGLPFWLPDGATIRRTLERYIVDKEVASGYLHVYTPP 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L++ SGHWD YR +MF          D   F L+PMNCP H+ V+ H + SYREL
Sbjct: 298 LASVDLYKTSGHWDHYREDMFPTMDMG----DGEEFVLRPMNCPHHIQVYKHHVHSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  K   LII +Y+DF
Sbjct: 354 PIRIAEIGMMHRYEKSGALSGLQRVREMSLNDGHLFVTPEQIQEEFQKALQLIIDVYEDF 413

Query: 419 GFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
              +   +LS R      K    D +W++A++++K  LD +       ++     GE AF
Sbjct: 414 NLTEYRFRLSLRDPKDTHKYYDDDEMWENAQSMLKAALDEMG------VDYFEAEGEAAF 467

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K A+G +    TIQ+DF LP RF   Y+ +  E+  PVMIHR V  ++ERF
Sbjct: 468 YGPKLDIQVKTALGNEETLSTIQLDFLLPERFGLTYIGADGEEHRPVMIHRGVISTMERF 527

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINY 593
             I+IEN+KG  P WL+P Q  V  +++   V+YA E+A +L+   + ++ D RNE +  
Sbjct: 528 TAILIENYKGAFPTWLAPHQVTVIPVSNEAHVDYAWEVAKVLRDKGVRVDVDERNEKMQL 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE---SLPPDC 650
           KIR+   KKIP  +I GDKE +++++ +RR+GS  T   ++ + +  +  +      PD 
Sbjct: 588 KIRQSQTKKIPYQLIVGDKEMADKTVNVRRYGSKQTHTEAIDEFVDNILADINRKSRPDA 647

Query: 651 Q 651
           +
Sbjct: 648 E 648


>gi|326317187|ref|YP_004234859.1| threonyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|323374023|gb|ADX46292.1| threonyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 639

 Score =  654 bits (1688), Expect = 0.0,   Method: Composition-based stats.
 Identities = 298/647 (46%), Positives = 437/647 (67%), Gaps = 19/647 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I++T PD S + +    + +DVA+SI   LAK  VA  ++G++ D SD +  +  ++II
Sbjct: 1   MIRITLPDNSQREYDGPVSVADVAQSIGPGLAKMTVAGKVDGRLVDASDVIDHDARLQII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TP D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ ++LA I
Sbjct: 61  TPRDQEGVEIIRHSCAHLVGHAVKQLYPTAKMVIGPVIEEGFYYDIAYERPFTPEDLAAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E++M+E+IA+D   +K+    ++  ++F  + E YK+ ++E +P ++ + LY   E+ D+
Sbjct: 121 EQRMKELIAQDYDVVKKMTPRDEVIQVFRERGEEYKLRLVEDMPDEKAMGLYYHQEYVDM 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +T  +K F KL +V+GAYWRGD+    L RIYGTAW  +++L  Y+  +EE+E
Sbjct: 181 CRGPHVPNTRFLKVF-KLTRVSGAYWRGDAKNEQLQRIYGTAWADKKDLEAYIKRIEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD 301
           KRDHR+L RE+DLFHI E   G +FWH KGW I+Q +  YMR+  + + Y+E+  PQ+LD
Sbjct: 240 KRDHRRLGRELDLFHIDEHSPGTVFWHPKGWTIWQGVEQYMRQVYRDNGYQEVKGPQILD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           +HLW+++GHWD YR NMF       T  +   +ALKPMNCPGH+ +FN G+KSYR+LP+R
Sbjct: 300 KHLWEKTGHWDKYRENMFT------TESEKHDYALKPMNCPGHILIFNQGVKSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
             EFG  +RNEP+G LHG+MRVR FTQDD H+FCT++Q+  EC+   +L+  +YKDFGF 
Sbjct: 354 YGEFGQCHRNEPTGGLHGIMRVRAFTQDDGHIFCTEDQIQQECINFTSLLQKVYKDFGFT 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            I+ K++TRPEKR+GS+  WD AEN +   L           +  + +G+GAFYGPK EY
Sbjct: 414 DIIYKVATRPEKRIGSEESWDKAENALIESLKASGC------DYQIAVGDGAFYGPKLEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L+DAIGR WQCGTIQVD ++P R  A YV    ++  P+++HRA+ GS+ERFIGI+IE 
Sbjct: 468 TLRDAIGRHWQCGTIQVDPSMPERLGAEYVGEDGQRHRPIVLHRAIVGSLERFIGILIEQ 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSH----HLSIETDFRNETINYKIRE 597
             G LP+WL+P+Q  V  IT +  +Y +EIA  L+       L +E D RNE I YKIRE
Sbjct: 528 HAGALPVWLAPVQVAVLNITGAQDDYCREIAAKLQKALPNQGLRVELDLRNEKITYKIRE 587

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           HS++K+P I++ GDKE +  ++ +R  G+     + L   I ++ ++
Sbjct: 588 HSLQKLPYILVVGDKEKAAGAVAVRARGNRDLGVMPLEAFISLIGQD 634


>gi|332529095|ref|ZP_08405059.1| threonyl-tRNA synthetase [Hylemonella gracilis ATCC 19624]
 gi|332041318|gb|EGI77680.1| threonyl-tRNA synthetase [Hylemonella gracilis ATCC 19624]
          Length = 644

 Score =  654 bits (1688), Expect = 0.0,   Method: Composition-based stats.
 Identities = 308/647 (47%), Positives = 431/647 (66%), Gaps = 19/647 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            +++T PD S + FP   T ++VA SI   L K  VA  ++G++ D SD +  +  ++II
Sbjct: 1   MVQITLPDASQRQFPGPVTVAEVAASIGPGLLKNTVAGKVDGRLVDASDLIDHDAKLQII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TP+DP  + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ D++A I
Sbjct: 61  TPKDPEGVEIIRHSCAHLVGHAVKQLYPTARMVIGPVIEEGFYYDISYERPFTPDDVAAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M+ +IA+D   +K+     +  E+F+ + E YK+ ++E +P +  + LY   E+ D+
Sbjct: 121 EARMKALIAQDYDVVKKMTPRAEVIEVFKQRGEDYKLRLIEDMPNETAMGLYYHQEYVDM 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +T  +K F KL K+AGAYWRGDS    L RIYGTAW  +++L  Y+  +EE+E
Sbjct: 181 CRGPHVPNTRFLKAF-KLTKLAGAYWRGDSKNEQLQRIYGTAWADKKDLDAYILRMEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL RE+DLFH+ E   G +FWH KGW ++Q +  YMRR  ++  Y E+  PQ+LD
Sbjct: 240 KRDHRKLGRELDLFHLDEHSPGTVFWHPKGWTVWQEVEQYMRRVYRENGYREVKGPQILD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+++GHWD YR NMF       T  + R +ALKPMNCPGH+ ++  G+KSYR+LP+R
Sbjct: 300 KSLWEKTGHWDKYRENMFT------TESEKRDYALKPMNCPGHILIYKQGVKSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
             EFG+ +RNEP+G LHG+MRVR FTQDD H+FCT++Q+  E     +L+  +YKDFGF 
Sbjct: 354 YGEFGACHRNEPTGGLHGIMRVRAFTQDDGHIFCTEDQIQAEVKAFTSLLQKVYKDFGFT 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
           +I+ KLSTRPEKR+GS+  WD AEN +   L               L GEGAFYGPK EY
Sbjct: 414 EIIYKLSTRPEKRIGSEESWDRAENALAEGLRASGC------EFDYLPGEGAFYGPKIEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            LKDA+GR WQCGTIQVD NLP R +A +V     +  PVM+HRA+ GS+ERFIGI+IE 
Sbjct: 468 TLKDALGRQWQCGTIQVDPNLPERLDAEFVGEDGGRHRPVMLHRAIVGSLERFIGILIEQ 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSH----HLSIETDFRNETINYKIRE 597
             G LP WL+P Q  V  IT +  +Y QEIA  L+       L +ETD RNE I YKIRE
Sbjct: 528 HGGALPAWLAPTQVAVLNITDAQADYCQEIAQKLRKALPNQELRVETDLRNEKITYKIRE 587

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           HS++K+P I++ GDKE +  ++ +R  G+     +SL   I ++ ++
Sbjct: 588 HSMQKLPFILVAGDKEKAAGAVAVRARGNKDLGVMSLDAFIQLIAQD 634


>gi|325690794|gb|EGD32795.1| threonine--tRNA ligase [Streptococcus sanguinis SK115]
          Length = 647

 Score =  654 bits (1688), Expect = 0.0,   Method: Composition-based stats.
 Identities = 255/651 (39%), Positives = 408/651 (62%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  +  +G+IEI+
Sbjct: 1   MIKITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGAIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQ 121
           TP+   +L ++RHS AH+ A+A + ++P++ + +GP I+DGFYYD D E    S+++L +
Sbjct: 61  TPDHEDALDILRHSAAHLFAQAARRLFPDIHLGVGPAIQDGFYYDTDNEAGQISNEDLPR 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWF 180
           IE++M++I+  + P +++ ++ ++ARE+F+   + YK+E++E     E  +T+YRQGE+ 
Sbjct: 121 IEEEMKKIVKENFPSIREEVTKDEAREIFK--NDPYKLELIEEHSEDEGGLTIYRQGEYV 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ R+YGTAW  +++L +YL   EE
Sbjct: 179 DLCRGPHVPSTGRIQIFHLL-NVAGAYWRGNSDNAMMQRVYGTAWFDKKDLKKYLQMREE 237

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           +++RDHRKL +E+DLF I+++   G+ FW   G  + + L  Y+  +++   Y+ + TP 
Sbjct: 238 AKERDHRKLGKELDLFMISQEVGQGLPFWLPNGATVRRELERYIVDKELASGYQHVYTPP 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L++ SGHW+ Y+ +MF          D   F L+PMNCP H+ V+ H + SYREL
Sbjct: 298 LASVELYKTSGHWEHYQEDMFPTMDMG----DGEEFVLRPMNCPHHIQVYKHHVHSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y DF
Sbjct: 354 PIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYADF 413

Query: 419 GFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
              +   +LS R      K   +D +W++A+ +++  LD +       ++     GE AF
Sbjct: 414 NLTEYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEM------DVDYFEAEGEAAF 467

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K A+G +    TIQ+DF LP RF+  YV +  E+  PVMIHR V  ++ERF
Sbjct: 468 YGPKLDIQVKTALGNEETLSTIQLDFLLPERFDLKYVGADGEEHRPVMIHRGVISTMERF 527

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINY 593
             I+IEN+KG  P WL+P Q  +  +++   ++YA ++A  L+   +  + D RNE + Y
Sbjct: 528 TAILIENYKGAFPTWLAPHQVTLIPVSNEAHIDYAWQVAKKLRDKGVRADVDERNEKMQY 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR     KIP  +I GDKE  + ++ +RR+G   T  + + + +  +  +
Sbjct: 588 KIRASQTSKIPYQLIVGDKEVEDGTVNVRRYGQKETHTIPVDEFVEQILAD 638


>gi|307272094|ref|ZP_07553357.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0855]
 gi|306511210|gb|EFM80217.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0855]
          Length = 660

 Score =  654 bits (1688), Expect = 0.0,   Method: Composition-based stats.
 Identities = 258/651 (39%), Positives = 401/651 (61%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +TFPDG++K F    T  DVA+SIS SLAKKA+A   NG + DL  P+  +GS+EI+
Sbjct: 17  SIHITFPDGAVKPFDSGVTTFDVAKSISNSLAKKALAGKFNGVLIDLDRPIVEDGSLEIV 76

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
           TP+   +L ++RHS AH+MA A++ ++P ++  +GP I+ GFYYD D  E P ++++L  
Sbjct: 77  TPDHEDALGILRHSSAHLMANALRRLFPNIKFGVGPAIDSGFYYDTDNGESPVTAEDLPA 136

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE +M +I+  ++P +++ +S  +A E+     + YKVE++  +P  E +T+Y QG++ D
Sbjct: 137 IEAEMMKIVKENNPIVRKEISRAEALEV--FADDPYKVELITDLPEDEIITIYDQGDFVD 194

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG HV STG+++ F KL+ VAGAYWRG+S+  M+ RIYGTA+  +++L +++   EE+
Sbjct: 195 LCRGVHVPSTGRIQVF-KLLSVAGAYWRGNSDNHMMQRIYGTAFFDKKDLKEFIKMREEA 253

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF ++++ GSG+ FW  KG  I +T+  Y+  ++I   Y+ + TP +
Sbjct: 254 KERDHRKLGKELDLFMVSQEVGSGLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIM 313

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            D  L++ SGHWD Y  +MF          D     L+PMNCP H+ V+ + + SYRELP
Sbjct: 314 ADVELYKTSGHWDHYHEDMFPPMDMG----DGEMLVLRPMNCPHHMMVYKNDIHSYRELP 369

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  +   L++++Y DF 
Sbjct: 370 IRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVAVYADFN 429

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R           DA+W+ A+ ++K  +D ++      ++     GE AFY
Sbjct: 430 ITDYRFRLSYRDPNNTDKYFDDDAMWEKAQAMLKAAMDELE------LDYFEAEGEAAFY 483

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK-CHPVMIHRAVFGSIERF 534
           GPK +  +K A+G +    TIQ+DF LP RF+  YV    E    PV+IHR +  ++ERF
Sbjct: 484 GPKLDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTMERF 543

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           +  + E +KG  P WL+PIQA +  ++  +  EYA EI   L++  L +E D RNE + Y
Sbjct: 544 VAYLTEVYKGAFPTWLAPIQATIIPVSVEAHSEYAYEIKERLQAQGLRVEVDDRNEKMGY 603

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR    +K+P  ++ GDKE  + ++ +RR+GS  T    L   I  +  E
Sbjct: 604 KIRASQTQKVPYQLVVGDKEMEDATVNVRRYGSKETSVEDLSIFIDSMAAE 654


>gi|24379968|ref|NP_721923.1| threonyl-tRNA synthetase [Streptococcus mutans UA159]
 gi|73919830|sp|Q8DT12|SYT_STRMU RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|24377953|gb|AAN59229.1|AE014990_3 putative threonyl-tRNA synthetase [Streptococcus mutans UA159]
          Length = 649

 Score =  654 bits (1688), Expect = 0.0,   Method: Composition-based stats.
 Identities = 264/659 (40%), Positives = 413/659 (62%), Gaps = 28/659 (4%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+TFPDG+++ F +  T S++AESIS+SLAKKA+A   NG++ D +  + ++GSIEI+
Sbjct: 1   MIKITFPDGAVREFEIGTTTSEIAESISKSLAKKALAGKFNGQLIDTTRAITQDGSIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQ 121
           TP+   +L ++RHS AH+ A+A + ++P++ + +GP I+DGFYYD D E    S+++L +
Sbjct: 61  TPDHEDALDILRHSAAHLFAQAARRLFPDIHLGVGPAIQDGFYYDTDNEAGQISNEDLPR 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-ENVTLYRQGEWF 180
           IE++M++I+  + P +++ ++ ++ARE+F+   + YK+E++E        +T+YRQGE+ 
Sbjct: 121 IEEEMKKIVKENFPSVREEVTKDEAREIFK--NDPYKLELIEEHSEDAGGLTIYRQGEYV 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV STG+++ F  L  VAGAYWRGDSN  M+ RIYGTAW  +++L  YL  LEE
Sbjct: 179 DLCRGPHVPSTGRIQVFHLL-NVAGAYWRGDSNNAMMQRIYGTAWFDKKDLKSYLKRLEE 237

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           +++RDHRKL +E+DLF I+++   G+ FW   G  I + +  Y+  +++   Y+ + TP 
Sbjct: 238 AKERDHRKLGKELDLFMISQEVGQGLPFWLPDGATIRRIIERYITDKEVASGYQHVYTPP 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L++ SGHWD YR +MF          D  +F L+PMNCP H+ V+ + + SYREL
Sbjct: 298 IASVDLYKTSGHWDHYREDMFPTMDMG----DGESFVLRPMNCPHHIEVYKNHVHSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  +   LII +Y+DF
Sbjct: 354 PIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQVEDEFKRTLQLIIDVYEDF 413

Query: 419 GFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
                  +LS R      K    D +W+ ++ ++K  +D +       ++     GE AF
Sbjct: 414 NLTDYSFRLSYRDPNDTHKYFDDDEMWEKSQTMLKAAMDDMG------LDYYEAEGEAAF 467

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K A+G D    TIQ+DF LP RF   Y+ +  E+  PVMIHR +  ++ERF
Sbjct: 468 YGPKLDIQVKTALGNDETLSTIQLDFLLPERFELTYIGADGEEHRPVMIHRGIVSTMERF 527

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINY 593
              +IE +KG  P WL+P Q  V  I++   ++YA E+A  L+ H +  + D RNE + Y
Sbjct: 528 TAYLIETYKGAFPTWLAPHQVTVIPISNEAHIDYAWEVAKELRDHGIRADVDDRNEKMQY 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           KIR+   KK+P  +I GDKE    ++ +RR+GS  T   S+ +      +E++  D ++
Sbjct: 588 KIRQSQTKKVPYQLIVGDKEVENGTVNVRRYGSKQTHTESIAEF-----RENILADIKR 641


>gi|328957059|ref|YP_004374445.1| threonine--tRNA ligase [Carnobacterium sp. 17-4]
 gi|328673383|gb|AEB29429.1| threonine--tRNA ligase [Carnobacterium sp. 17-4]
          Length = 645

 Score =  654 bits (1688), Expect = 0.0,   Method: Composition-based stats.
 Identities = 256/651 (39%), Positives = 408/651 (62%), Gaps = 22/651 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           S+I +TFPDG++K+FP+ ++  D+AESIS+ LAKKA+A   NG++ DL  P+   G IEI
Sbjct: 2   SEINITFPDGAVKSFPMGSSTKDIAESISKGLAKKALAGKFNGELVDLVRPLEVNGEIEI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           ITP+   +L ++RHS AH+MA A++ ++P+++  +GP I  GFYYD D E P + +++ +
Sbjct: 62  ITPDHEDALQILRHSTAHLMANALRRLYPDIKFGVGPAISTGFYYDTDSEAPITDEDIPK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE +M  I+  ++P +++ ++ E+A E+F+   + YKVE++ ++P  E +T+Y QG++ D
Sbjct: 122 IEAEMMAIVKENNPIVRKEVTREEALEIFK--DDPYKVELITALPESEKITVYDQGDFVD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG HV STG+++ F KL+ +AGAYWRG+S+  M+ R+YGTA+  +++L +++   EE+
Sbjct: 180 LCRGVHVPSTGRIQVF-KLLSLAGAYWRGNSDNKMMQRVYGTAFFDKKDLKEFIKMREEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           + RDHRKL +E+DLF I+ + GSG+ FW  KG  I +T+  Y+  R+I   Y+ + TP +
Sbjct: 239 KLRDHRKLGKELDLFMISPEVGSGLPFWLPKGATIRRTIERYIVDREISLGYQHVYTPIM 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            D +L++ SGHWD Y  +MF          D     L+PMNCP H+ V+ + + SYRELP
Sbjct: 299 ADVNLYKTSGHWDHYHEDMFPPMDMG----DGEMLVLRPMNCPHHMMVYKNDVHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  T +D H F   +Q+  E  +   L++++Y DF 
Sbjct: 355 IRIAELGQMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIEEEFKRTLELMLAVYGDFN 414

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R           D +W+ A+ ++K  +D ++      ++     GE AFY
Sbjct: 415 ITDYRFRLSYRDPNNTEKYYDDDGMWEKAQTMLKAAMDDME------LDYFEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK-CHPVMIHRAVFGSIERF 534
           GPK + ++K AIG +    TIQ+DF LP RF+  YV    E    PV+IHR +  ++ERF
Sbjct: 469 GPKLDVLVKTAIGIEETLSTIQLDFLLPERFDLTYVGEDGENNHRPVVIHRGIVSTMERF 528

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           +  +IE +KG  P WL+P+QA +  +      +YA EI   L+S  + ++ D RNE + Y
Sbjct: 529 VAYLIEEYKGAFPTWLAPVQATIIPVNLDMHTDYAYEIKKQLESIGMRVDVDERNEKMGY 588

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR    +KIP  ++ GD E  + ++ +R++G   T+ + L D I  ++ E
Sbjct: 589 KIRASQTQKIPYQLVVGDSEVQDNTVAVRKYGEKATETIGLNDYIEKVSSE 639


>gi|194397191|ref|YP_002038247.1| threonyl-tRNA synthetase [Streptococcus pneumoniae G54]
 gi|238690846|sp|B5E6Q8|SYT_STRP4 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|194356858|gb|ACF55306.1| threonyl-tRNA synthetase (thrS) [Streptococcus pneumoniae G54]
          Length = 647

 Score =  654 bits (1688), Expect = 0.0,   Method: Composition-based stats.
 Identities = 264/651 (40%), Positives = 406/651 (62%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +TFPDG+I+ F    T  ++A+SIS SLAKKA+A   NGK+ D +  +  +GSIEI+
Sbjct: 1   MINITFPDGAIREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGSIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQ 121
           TP+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D      S+++L +
Sbjct: 61  TPDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNTAGQISNEDLPR 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWF 180
           IE++MQ+I+  + P +++ ++ ++ARE+F+   + YK+E++E     E  +T+YRQGE+ 
Sbjct: 121 IEEEMQKIVKENFPSIREEVTKDEAREIFK--NDPYKLELIEEHSEDEGGLTIYRQGEYV 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ RIYGTAW  +++L  YL   EE
Sbjct: 179 DLCRGPHVPSTGRIQIFHLLH-VAGAYWRGNSDNAMMQRIYGTAWFDKKDLKNYLQMREE 237

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           +++RDHRKL +E+DLF I+++   G+ FW   G  I + L  Y+  +++   Y+ + TP 
Sbjct: 238 AKERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVNKELASGYQHVYTPP 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L++ SGHWD Y+ +MF          D   F L+PMNCP H+ VF H + SYREL
Sbjct: 298 LASVELYKTSGHWDHYQEDMFPTMDMG----DGEEFVLRPMNCPHHIQVFKHHVHSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y+DF
Sbjct: 354 PIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYEDF 413

Query: 419 GFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
                  +LS R      K   +D +W++A+ +++  LD +       ++     GE AF
Sbjct: 414 NLTDYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAF 467

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K A+G++    TIQ+DF LP RF+  Y+ +  E   PVMIHR V  ++ERF
Sbjct: 468 YGPKLDIQIKTALGKEETLSTIQLDFLLPERFDLKYIGADGEDHRPVMIHRGVISTMERF 527

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
             I+IEN+KG  P WL+P Q  +  ++    V+YA E+A  L+   +  + D RNE + +
Sbjct: 528 TAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAKKLRDRGVRADVDERNEKMQF 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR     KIP  +I GDKE  + ++ +RR+G   TQ VS+ + +  +  +
Sbjct: 588 KIRASQTSKIPYQLIVGDKEMEDETVNVRRYGQKETQTVSVDNFVQAILAD 638


>gi|152970729|ref|YP_001335838.1| threonyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
           MGH 78578]
 gi|330009686|ref|ZP_08306560.1| threonine--tRNA ligase [Klebsiella sp. MS 92-3]
 gi|150955578|gb|ABR77608.1| threonyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
           MGH 78578]
 gi|328534774|gb|EGF61330.1| threonine--tRNA ligase [Klebsiella sp. MS 92-3]
          Length = 622

 Score =  654 bits (1688), Expect = 0.0,   Method: Composition-based stats.
 Identities = 291/632 (46%), Positives = 422/632 (66%), Gaps = 16/632 (2%)

Query: 24  SDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMA 82
            DVA  I   LAK  +A  +NG++ D  DP+  + ++ IIT +D   L +IRHSCAH++ 
Sbjct: 1   MDVALDIGPGLAKATIAGRVNGELVDACDPIESDSTLSIITAKDEEGLEIIRHSCAHLLG 60

Query: 83  EAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLS 142
            A++ +WP  ++AIGP++++GFYYD D +   + +++  +EK+M E+  ++   +K+ +S
Sbjct: 61  HAIKQLWPNTKMAIGPVVDNGFYYDVDLDHTLTQEDIDALEKRMHELAEKNYDVIKKKVS 120

Query: 143 HEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLM 201
             +ARE F  + E+YKV IL E+I   +   LY   E+ D+CRGPHV +      F KLM
Sbjct: 121 WHEARETFVKRGESYKVSILDENIAHDDKPGLYHHEEYIDMCRGPHVPNMRFCHHF-KLM 179

Query: 202 KVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED 261
           K AGAYWRGDSN  ML RIYGTAW  ++ L  YL  LEE+ KRDHRK+ +++DL+H+ E+
Sbjct: 180 KTAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEE 239

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
             G++FWH  GW IF+ L +++R K+K+  Y+E+  P ++D+ LW+++GHWD+Y+  MF 
Sbjct: 240 APGMVFWHNDGWTIFRELETFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFT 299

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
                 T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+AEFGS +RNEPSG+LHGL
Sbjct: 300 ------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGL 353

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           MRVRGFTQDDAH+FCT++Q+ +E      ++  +Y  FGFEKI+VKLSTRPEKR+GSD  
Sbjct: 354 MRVRGFTQDDAHIFCTEDQVRDEVNACIRMVYDMYSTFGFEKIVVKLSTRPEKRIGSDET 413

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDF 500
           WD AE  +   L+      ++ I     LGEGAFYGPK E+ L D + R WQCGT+Q+DF
Sbjct: 414 WDRAEADLAVALE------ENNIPFEYQLGEGAFYGPKIEFTLYDCLDRAWQCGTVQLDF 467

Query: 501 NLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTI 560
           +LP R +A YV  ++E+  PVMIHRA+ GS+ERFIGI+ E F G  P W++P+Q +V  I
Sbjct: 468 SLPQRLSASYVGENNERQVPVMIHRAILGSLERFIGILTEEFAGFFPTWIAPVQVVVMNI 527

Query: 561 TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
           T S  EY  E+   L++  + ++ D RNE I +KIREH+++++P +++CGDKE     + 
Sbjct: 528 TDSQAEYVNELTRKLQNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVA 587

Query: 621 IRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           +R         + + + I  L +E      Q+
Sbjct: 588 VRTRRGKDLGSMDVNEVIEKLQQEIRSRSLQQ 619


>gi|306833981|ref|ZP_07467104.1| threonine--tRNA ligase [Streptococcus bovis ATCC 700338]
 gi|304423847|gb|EFM26990.1| threonine--tRNA ligase [Streptococcus bovis ATCC 700338]
          Length = 666

 Score =  654 bits (1688), Expect = 0.0,   Method: Composition-based stats.
 Identities = 265/662 (40%), Positives = 415/662 (62%), Gaps = 26/662 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
           + +K+TFPDG+++ F    T  ++A+SIS SLAKKA+A   NG++ D +  +  +GSIEI
Sbjct: 18  NMVKITFPDGAVREFESGVTPFEIAQSISNSLAKKALAGKFNGQLIDTTREITEDGSIEI 77

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELA 120
           +TP+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D +    S ++L 
Sbjct: 78  VTPDHEDALGILRHSAAHLFAQAAKRLFPDLCLGVGPAIEDGFYYDTDNKAGQISDEDLP 137

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEW 179
           +IE++M++I+  + P +++ ++ ++ARELF+   + YK+E++E   A E  +T+Y QGE+
Sbjct: 138 RIEEEMKKIVKENFPCIRKEITIDEARELFK--NDPYKLELIEEHGADEGGLTVYSQGEF 195

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ R+YGTAW  +++L  YL   +
Sbjct: 196 TDLCRGPHVPSTGRIQVFHLL-NVAGAYWRGNSDNAMMQRVYGTAWFDKKDLKAYLKQRQ 254

Query: 240 ESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTP 297
           E+++RDHRKL +E+DLF I+++   G+ FW   G  I +TL  Y+  +++   Y  + TP
Sbjct: 255 EAKERDHRKLGKELDLFMISQEVGQGLPFWLPDGATIRRTLERYIVDKEVASGYLHVYTP 314

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    L++ SGHWD YR +MF          D   F L+PMNCP H+ V+ H + SYRE
Sbjct: 315 PLASVDLYKTSGHWDHYREDMFPTMDMG----DGEEFVLRPMNCPHHIQVYKHHVHSYRE 370

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  K   LII +Y+D
Sbjct: 371 LPIRIAEIGMMHRYEKSGALSGLQRVREMSLNDGHLFVTPEQIQEEFQKALQLIIDVYED 430

Query: 418 FGFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           F   +   +LS R      K    D +W++A++++K  LD +       +      GE A
Sbjct: 431 FDLTEYRFRLSLRDPKDTHKYYDDDEMWENAQSMLKAALDEMG------VEYFEAEGEAA 484

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  +K A+G +    TIQ+DF LP RF   Y+ +  E+  PVMIHR V  ++ER
Sbjct: 485 FYGPKLDIQVKTALGNEETLSTIQLDFLLPERFGLTYIGADGEEHRPVMIHRGVISTMER 544

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETIN 592
           F  I+IEN+KG  P WL+P Q  V  +++   V+YA E+A +L+   + ++ D RNE + 
Sbjct: 545 FTAILIENYKGAFPTWLAPHQVTVIPVSNEAHVDYAWEVAKVLRDKGVRVDVDERNEKMQ 604

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE---SLPPD 649
            KIR+   KKIP  +I GDKE +++++ +RR+GS  T   ++ + +  +  +      PD
Sbjct: 605 LKIRQSQTKKIPYQLIVGDKEMADKTVNVRRYGSKQTHTEAIDEFVDNILADINRKSRPD 664

Query: 650 CQ 651
            +
Sbjct: 665 AE 666


>gi|239637520|ref|ZP_04678492.1| threonyl-tRNA synthetase [Staphylococcus warneri L37603]
 gi|239596738|gb|EEQ79263.1| threonyl-tRNA synthetase [Staphylococcus warneri L37603]
          Length = 645

 Score =  654 bits (1688), Expect = 0.0,   Method: Composition-based stats.
 Identities = 263/650 (40%), Positives = 403/650 (62%), Gaps = 21/650 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
             I + FPDG+ K F    T  D+A+SIS  L KKAVA   NG++ DL+ P+  +G IEI
Sbjct: 2   DQINIQFPDGNSKAFDKGTTTEDIAQSISPGLRKKAVAGKFNGQMVDLTRPLEEDGEIEI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +TP    +L V+RHS AH+MA+A++ ++ +V+  +GP+IE GFYYDFD ++  SSD+  +
Sbjct: 62  VTPGSDEALEVLRHSTAHLMAQALKRLYGDVKFGVGPVIEGGFYYDFDTDEKISSDDFEK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK M++I+  +    ++ ++ ++A+  F+   + YK+E++++IP  ENVTLY QGE+ D
Sbjct: 122 IEKTMKKIVDENHKIERKVVTRDEAKAFFK--DDPYKLELIDAIPEDENVTLYSQGEFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG HV ST ++K+F KL+  AGAYWRGDSN  ML RIYGTA+  +++L  +L  LEE 
Sbjct: 180 LCRGVHVPSTSKIKEF-KLLSTAGAYWRGDSNNKMLQRIYGTAFFDKKDLKAHLEMLEER 238

Query: 242 EKRDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRK+ ++++LF +    G+G+  W   G  I + +  Y+  +++   Y+ + TP +
Sbjct: 239 KERDHRKIGKDLELFANSQLVGAGLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVL 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +  L++ SGHWD Y+ +MF     D+T        L+PMNCP H+ ++N+   SYRELP
Sbjct: 299 ANVDLYKTSGHWDHYQEDMFPPMKLDET----EEMVLRPMNCPHHMMIYNNKPHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G+++R E SG++ GL RVRG T +D+H+F   +Q+  E  ++ N+I  +YKDFG
Sbjct: 355 IRIAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVNMIQDVYKDFG 414

Query: 420 FEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           FE    +LS R      K    D +W+ AEN++K   D +  S ++ I      GE AFY
Sbjct: 415 FEDYRFRLSYRDPEDKEKYFDDDEMWNKAENMIKEAADELGLSYEEAI------GEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G++    T Q+DF LP RF   Y+    E+  PV+IHR V  ++ERF+
Sbjct: 469 GPKLDVQVKTAMGKEETLSTAQLDFLLPERFELTYIGQDGEQHRPVVIHRGVVSTMERFV 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             + E  KG  P WL+P Q  +  +      +YA+ I + LKS  + +E D RNE + YK
Sbjct: 529 AFLTEETKGAFPTWLAPKQVEIIPVNLDLHYDYAKSIQDELKSQGVRVEIDDRNEKMGYK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IRE  ++KIP  I+ GDKE     + +R++GS   + +   + I  L  E
Sbjct: 589 IREAQMQKIPYQIVVGDKEVENNEVNVRKYGSQDQETLEKDEFIWNLVDE 638


>gi|288905772|ref|YP_003430994.1| Threonyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
 gi|325978807|ref|YP_004288523.1| threonyl-tRNA synthetase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|288732498|emb|CBI14070.1| Threonyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
 gi|325178735|emb|CBZ48779.1| threonyl-tRNA synthetase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
          Length = 648

 Score =  654 bits (1688), Expect = 0.0,   Method: Composition-based stats.
 Identities = 265/661 (40%), Positives = 414/661 (62%), Gaps = 26/661 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            +K+TFPDG+++ F    T  ++A+SIS SLAKKA+A   NG++ D +  +  +GSIEI+
Sbjct: 1   MVKITFPDGAVREFESGVTPFEIAQSISNSLAKKALAGKFNGQLIDTTREITEDGSIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQ 121
           TP+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D +    S ++L +
Sbjct: 61  TPDHEDALGILRHSAAHLFAQAAKRLFPDLCLGVGPAIEDGFYYDTDNKAGQISDEDLPR 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWF 180
           IE++M++I+  + P +++ ++ ++ARELF+   + YK+E++E   A E  +T+Y QGE+ 
Sbjct: 121 IEEEMKKIVKENFPCIRKEITIDEARELFK--NDPYKLELIEEHGADEGGLTVYSQGEFT 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ R+YGTAW  +++L  YL   +E
Sbjct: 179 DLCRGPHVPSTGRIQVFHLL-NVAGAYWRGNSDNAMMQRVYGTAWFDKKDLKAYLKQRQE 237

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           +++RDHRKL +E+DLF I+++   G+ FW   G  I +TL  Y+  +++   Y  + TP 
Sbjct: 238 AKERDHRKLGKELDLFMISQEVGQGLPFWLPDGATIRRTLERYIVDKEVASGYLHVYTPP 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L++ SGHWD YR +MF          D   F L+PMNCP H+ V+ H + SYREL
Sbjct: 298 LASVDLYKTSGHWDHYREDMFPTMDMG----DGEEFVLRPMNCPHHIQVYKHHVHSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  K   LII +Y+DF
Sbjct: 354 PIRIAEIGMMHRYEKSGALSGLQRVREMSLNDGHLFVTPEQIQEEFQKALQLIIDVYEDF 413

Query: 419 GFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
              +   +LS R      K    D +W++A++++K  LD +       +      GE AF
Sbjct: 414 NLTEYRFRLSLRDPKDTHKYYDDDEMWENAQSMLKAALDEMG------VEYFEAEGEAAF 467

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K A+G +    TIQ+DF LP RF   Y+ +  E+  PVMIHR V  ++ERF
Sbjct: 468 YGPKLDIQVKTALGNEETLSTIQLDFLLPERFGLTYIGADGEEHRPVMIHRGVISTMERF 527

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINY 593
             I+IEN+KG  P WL+P Q  V  +++   V+YA E+A +L+   + ++ D RNE +  
Sbjct: 528 TAILIENYKGAFPTWLAPHQVTVIPVSNEAHVDYAWEVAKVLRDKGVRVDVDERNEKMQL 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE---SLPPDC 650
           KIR+   KKIP  +I GDKE +++++ +RR+GS  T   ++ + +  +  +      PD 
Sbjct: 588 KIRQSQTKKIPYQLIVGDKEMADKTVNVRRYGSKQTHTEAIDEFVDNILADINRKSRPDA 647

Query: 651 Q 651
           +
Sbjct: 648 E 648


>gi|168493529|ref|ZP_02717672.1| threonyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
 gi|183576436|gb|EDT96964.1| threonyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
          Length = 647

 Score =  654 bits (1687), Expect = 0.0,   Method: Composition-based stats.
 Identities = 263/651 (40%), Positives = 406/651 (62%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  +  +GSIEI+
Sbjct: 1   MINITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGSIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQ 121
           TP+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D      S+++L +
Sbjct: 61  TPDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNTAGQISNEDLPR 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWF 180
           IE++MQ+I+  + P +++ ++ ++ARE+F+   + YK+E++E     E  +T+YRQGE+ 
Sbjct: 121 IEEEMQKIVKENFPSIREEVTKDEAREIFK--NDPYKLELIEEHSEDEGGLTIYRQGEYV 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ RIYGTAW  +++L  YL   EE
Sbjct: 179 DLCRGPHVPSTGRIQIFHLLH-VAGAYWRGNSDNAMMQRIYGTAWFDKKDLKNYLQMREE 237

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           +++RDHRKL +E+DLF I+++   G+ FW   G  I + L  Y+  +++   Y+ + TP 
Sbjct: 238 AKERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELEHYIVNKELASGYQHVYTPP 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L++ SGHWD Y+ +MF          D   F L+PMNCP H+ VF H + SYREL
Sbjct: 298 LASVELYKTSGHWDHYQEDMFPTMDMG----DGEEFVLRPMNCPHHIQVFKHHVHSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y+DF
Sbjct: 354 PIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYEDF 413

Query: 419 GFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
                  +LS R      K   +D +W++A+ +++  LD +       ++     GE AF
Sbjct: 414 NLTDYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAF 467

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K A+G++    TIQ+DF LP RF+  Y+ +  E   PVMIHR V  ++ERF
Sbjct: 468 YGPKLDIQIKTALGKEETLSTIQLDFLLPERFDLKYIGADGEDHRPVMIHRGVISTMERF 527

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
             I+IEN+KG  P WL+P Q  +  ++    V+YA E+A  L+   +  + D RNE + +
Sbjct: 528 TAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAKKLRDRGVRADVDERNEKMQF 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR     KIP  +I GDKE  + ++ +RR+G   TQ VS+ + +  +  +
Sbjct: 588 KIRASQTSKIPYQLIVGDKEMEDETVNVRRYGQKETQTVSVDNFVQAILAD 638


>gi|225855059|ref|YP_002736571.1| threonyl-tRNA synthetase [Streptococcus pneumoniae JJA]
 gi|237649181|ref|ZP_04523433.1| threonyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974]
 gi|237822258|ref|ZP_04598103.1| threonyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974M2]
 gi|254783541|sp|C1CFK0|SYT_STRZJ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|225723844|gb|ACO19697.1| threonyl-tRNA synthetase [Streptococcus pneumoniae JJA]
          Length = 647

 Score =  654 bits (1687), Expect = 0.0,   Method: Composition-based stats.
 Identities = 263/651 (40%), Positives = 406/651 (62%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  +  +GSIEI+
Sbjct: 1   MINITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGSIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQ 121
           TP+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D      S+++L +
Sbjct: 61  TPDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNTAGQISNEDLPR 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWF 180
           IE++MQ+I+  + P +++ ++ ++ARE+F+   + YK+E++E     E  +T+YRQGE+ 
Sbjct: 121 IEEEMQKIVKENFPSIREEVTKDEAREIFK--NDPYKLELIEEHSEDEGGLTIYRQGEYV 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ RIYGTAW  +++L  YL   EE
Sbjct: 179 DLCRGPHVPSTGRIQIFHLLH-VAGAYWRGNSDNAMMQRIYGTAWFEKKDLKNYLQMREE 237

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           +++RDHRKL +E+DLF I+++   G+ FW   G  I + L  Y+  +++   Y+ + TP 
Sbjct: 238 AKERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVNKELASGYQHVYTPP 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L++ SGHWD Y+ +MF          D   F L+PMNCP H+ VF H + SYREL
Sbjct: 298 LASVELYKTSGHWDHYQEDMFPTMDMG----DGEEFVLRPMNCPHHIQVFKHHVHSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y+DF
Sbjct: 354 PIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYEDF 413

Query: 419 GFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
                  +LS R      K   +D +W++A+ +++  LD +       ++     GE AF
Sbjct: 414 NLTDYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAF 467

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K A+G++    TIQ+DF LP RF+  Y+ +  E   PVMIHR V  ++ERF
Sbjct: 468 YGPKLDIQIKTALGKEETLSTIQLDFLLPERFDLKYIGADGEDHRPVMIHRGVISTMERF 527

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
             I+IEN+KG  P WL+P Q  +  ++    V+YA E+A  L+   +  + D RNE + +
Sbjct: 528 TAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAKKLRDRGVRADVDERNEKMQF 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR     KIP  +I GDKE  + ++ +RR+G   TQ VS+ + +  +  +
Sbjct: 588 KIRASQTSKIPYQLIVGDKEMEDETVNVRRYGQKETQTVSVDNFVQAILAD 638


>gi|321313312|ref|YP_004205599.1| threonyl-tRNA synthetase [Bacillus subtilis BSn5]
 gi|320019586|gb|ADV94572.1| threonyl-tRNA synthetase [Bacillus subtilis BSn5]
          Length = 638

 Score =  654 bits (1687), Expect = 0.0,   Method: Composition-based stats.
 Identities = 280/646 (43%), Positives = 419/646 (64%), Gaps = 16/646 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           M   + +  PDG IK +P   T  + A SIS SL KKA A  +NGK+ DLS  +  +  +
Sbjct: 1   MSKHVHIQLPDGQIKEYPKGITIKEAAGSISSSLQKKAAAGQVNGKLVDLSFKLEEDAKL 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            I+T +    L V+RH+  H++ +AV+ ++ EV + +GP+IEDGFYYD    +  +S +L
Sbjct: 61  SIVTLDSQEGLQVLRHTTVHVLVQAVKRLYGEVSLGVGPVIEDGFYYDMKLGKSLASGDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEK+M+ II  +    +  +S+E+A ELF  K E  K+EIL+ IP  E++TLY+QGE+
Sbjct: 121 EAIEKEMEHIINENLEIKRMEVSYEEAEELFAQKGERLKLEILKDIPRGEDITLYQQGEF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPH+ STG +K F KL +V+GAYWRGDS   +L R+YG A+  +++L  +L+ LE
Sbjct: 181 VDLCRGPHLPSTGMIKAF-KLTRVSGAYWRGDSKNEVLQRVYGVAFQKKKDLDAHLHMLE 239

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+ KRDHRKL +++ LF  +E+  G+ F+  KG  +   L  + R  +    Y+E+ TP 
Sbjct: 240 EAAKRDHRKLGKQLGLFMFSEEAPGMPFYLPKGQIVRNELERFSRELQTNAGYDEVRTPF 299

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +++Q LW+QSGHWD YR NM+  +       D   FA+KPMNCPGH+ +F + L SYR+L
Sbjct: 300 MMNQRLWEQSGHWDHYRDNMYFSEV------DDTRFAMKPMNCPGHMLIFKNSLYSYRDL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG V+R+E SG+L+G++RVR F QDDAH+F  ++Q+ +E  +   LI  +Y+ F
Sbjct: 354 PIRMAEFGQVHRHEYSGALNGMLRVRTFCQDDAHIFVREDQIESEIKEAIRLIDEVYRTF 413

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE   V+LSTRPE  +G D+LW+ +E  +  VL+ +       ++  +  G+GAFYGPK
Sbjct: 414 GFEYS-VELSTRPEDSLGDDSLWEASERALARVLEELG------LSYEINEGDGAFYGPK 466

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++ +KDA+ R  QC TIQ+DF +P +F+  Y+N H+EK  PV+IHRAVFGSI+RF GI+
Sbjct: 467 IDFHIKDALKRSHQCATIQLDFQMPEKFDLTYINEHNEKVRPVVIHRAVFGSIDRFFGIL 526

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE++ G  P+WL+PIQ  +  ++   ++Y +++   LK   +    D RNE + YKIRE 
Sbjct: 527 IEHYGGAFPVWLAPIQVQIIPVSHVHLDYCRKVQAELKQAGIRAGIDERNEKLGYKIRES 586

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            ++KIP +++ GD E  E ++ +RRFG    + VS       L K+
Sbjct: 587 QVQKIPYVLVLGDHEEQENAVNVRRFGHQQNEHVSFQTFKDKLVKQ 632


>gi|227550587|ref|ZP_03980636.1| threonine--tRNA ligase [Enterococcus faecium TX1330]
 gi|257888612|ref|ZP_05668265.1| threonyl-tRNA synthetase [Enterococcus faecium 1,141,733]
 gi|257897010|ref|ZP_05676663.1| threonyl-tRNA synthetase [Enterococcus faecium Com12]
 gi|257898951|ref|ZP_05678604.1| threonyl-tRNA synthetase [Enterococcus faecium Com15]
 gi|293378702|ref|ZP_06624860.1| threonine--tRNA ligase [Enterococcus faecium PC4.1]
 gi|293571021|ref|ZP_06682064.1| threonyl-tRNA synthetase [Enterococcus faecium E980]
 gi|227180295|gb|EEI61267.1| threonine--tRNA ligase [Enterococcus faecium TX1330]
 gi|257824666|gb|EEV51598.1| threonyl-tRNA synthetase [Enterococcus faecium 1,141,733]
 gi|257833575|gb|EEV59996.1| threonyl-tRNA synthetase [Enterococcus faecium Com12]
 gi|257836863|gb|EEV61937.1| threonyl-tRNA synthetase [Enterococcus faecium Com15]
 gi|291608947|gb|EFF38226.1| threonyl-tRNA synthetase [Enterococcus faecium E980]
 gi|292642630|gb|EFF60782.1| threonine--tRNA ligase [Enterococcus faecium PC4.1]
          Length = 647

 Score =  654 bits (1687), Expect = 0.0,   Method: Composition-based stats.
 Identities = 261/651 (40%), Positives = 402/651 (61%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            IK+TFPDG++K F    T   +AESIS+SLAKKA+A  +NGK+ DL+ P+  + SIEI+
Sbjct: 1   MIKITFPDGAVKEFEAGTTTLAIAESISKSLAKKALAGKVNGKLIDLTRPIEEDASIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQ 121
           TP+   +L ++RHS AH+MA+A++ ++P +   +GP I+ GFYYD D  Q   ++++L  
Sbjct: 61  TPDHEDALGLVRHSAAHLMAQAMRRLYPNIHFGVGPAIDSGFYYDTDNGQNQVTAEDLPA 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE +M +I+  + P  ++ LS ++A E+     + YKVE++  +P +E +T Y+QGE+ D
Sbjct: 121 IEAEMMKIVKENLPIERRVLSKQEALEI--FASDPYKVELISELPEEEVITAYQQGEFID 178

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++ F KL+ VAGAYWRG+SN  M+ R+YGTA+  ++ L +Y+   EE+
Sbjct: 179 LCRGPHVPSTGRIQVF-KLLSVAGAYWRGNSNNQMMQRVYGTAFFDKKALKEYIRLREEA 237

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF ++ + GSG+ FW  KG  I +T+  Y+  +++   Y+ + TP +
Sbjct: 238 KERDHRKLGKELDLFMVSPEVGSGLPFWLPKGATIRRTIERYIVDKEVSLGYQHVYTPIM 297

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            D  L++ SGHWD Y+ +MF          D     L+PMNCP H+ V+ + + SYRELP
Sbjct: 298 GDVELYKTSGHWDHYQEDMFPPMDMG----DGEMLVLRPMNCPHHMMVYKNAIHSYRELP 353

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  +   L++++Y DF 
Sbjct: 354 IRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVAVYADFN 413

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R           DA+W+ A+ ++K  +D ++      ++     GE AFY
Sbjct: 414 ITDYRFRLSYRDPNNTDKYFDDDAMWEKAQAMLKAAMDELE------LDYFEAEGEAAFY 467

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK-CHPVMIHRAVFGSIERF 534
           GPK +  +K A+G +    TIQ+DF LP RF+  YV    E    PV+IHR +  ++ERF
Sbjct: 468 GPKLDVQVKTALGTEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTMERF 527

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           +  + E +KG  P WL+PIQA +  ++  +  +YA EI   L+   L +E D RNE + Y
Sbjct: 528 VAYLTEVYKGAFPTWLAPIQATIIPVSVDAHGDYAYEIKERLQMKGLRVEVDDRNEKMGY 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR    +KIP  ++ GDKE  + ++ +RR+GS  T    L   I  +  E
Sbjct: 588 KIRASQTQKIPYQLVVGDKELEDATVNVRRYGSKETAVEDLNIFIDAMEAE 638


>gi|312951108|ref|ZP_07770013.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|310630884|gb|EFQ14167.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|315154152|gb|EFT98168.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0031]
          Length = 660

 Score =  654 bits (1687), Expect = 0.0,   Method: Composition-based stats.
 Identities = 259/651 (39%), Positives = 401/651 (61%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +TFPDG++K F    T  DVA+SIS SLAKKA+A   NG + DL  P+  +GS+EI+
Sbjct: 17  SIHITFPDGAVKLFDSGITTFDVAKSISNSLAKKALAGKFNGVLIDLDRPIVEDGSLEIV 76

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
           TP+   +L ++RHS AH+MA A++ ++P ++  +GP I+ GFYYD D  E P ++++L  
Sbjct: 77  TPDHEDALGILRHSSAHLMANALRRLFPNIKFGVGPAIDSGFYYDTDNGESPVTAEDLPA 136

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE +M +I+  ++P +++ +S  +A EL     + YKVE++  +P  E +T+Y QG++ D
Sbjct: 137 IEAEMMKIVKENNPIVRKEISRAEALEL--FADDPYKVELITDLPEDEIITVYDQGDFVD 194

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG HV STG+++ F KL+ VAGAYWRG+S+  M+ RIYGTA+  +++L +++   EE+
Sbjct: 195 LCRGVHVPSTGRIQVF-KLLSVAGAYWRGNSDNHMMQRIYGTAFFDKKDLKEFIKMREEA 253

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF ++++ GSG+ FW  KG  I +T+  Y+  ++I   Y+ + TP +
Sbjct: 254 KERDHRKLGKELDLFMVSQEVGSGLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIM 313

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            D  L++ SGHWD Y  +MF          D     L+PMNCP H+ V+ + + SYRELP
Sbjct: 314 ADVELYKTSGHWDHYHEDMFPPMDMG----DGEMLVLRPMNCPHHMMVYKNDIHSYRELP 369

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  +   L++++Y DF 
Sbjct: 370 IRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVAVYADFN 429

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R           DA+W+ A+ ++K  +D ++      ++     GE AFY
Sbjct: 430 ITDYRFRLSYRDPNNTDKYFDDDAMWEKAQAMLKAAMDELE------LDYFEAEGEAAFY 483

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK-CHPVMIHRAVFGSIERF 534
           GPK +  +K A+G +    TIQ+DF LP RF+  YV    E    PV+IHR +  ++ERF
Sbjct: 484 GPKLDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTMERF 543

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           +  + E +KG  P WL+PIQA +  ++  +  EYA EI   L++  L +E D RNE + Y
Sbjct: 544 VAYLTEVYKGAFPTWLAPIQATIIPVSVEAHSEYAYEIKERLQAQGLRVEVDDRNEKMGY 603

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR    +K+P  ++ GDKE  + ++ +RR+GS  T    L   I  +  E
Sbjct: 604 KIRASQTQKVPYQLVVGDKEMEDATVNVRRYGSKETSVEDLSIFIDSMAAE 654


>gi|299537247|ref|ZP_07050550.1| threonyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
 gi|298727488|gb|EFI68060.1| threonyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
          Length = 638

 Score =  654 bits (1687), Expect = 0.0,   Method: Composition-based stats.
 Identities = 285/645 (44%), Positives = 421/645 (65%), Gaps = 19/645 (2%)

Query: 1   MPSD-IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGS 58
           M +  I + FPDG  + F    T +D+A++I   L KKAVA ++NG + DL+ P+  +  
Sbjct: 1   MSNQRIHIQFPDGQQQAFTKGVTLTDIAQAIRPELRKKAVAGSVNGTIIDLTRPIMEDAQ 60

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           I +        + VIRHS AH+ A+A++ ++P  Q  +GP+IE+GFYYD D     +  +
Sbjct: 61  ITLYDASSKEGIEVIRHSTAHLFAQAIKRLYPHAQFGVGPVIENGFYYDIDIADTLTPSD 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L QIEKKM++I+  + P  ++ +S E+A++L     +  K+E+LE+IPA E VT+Y QGE
Sbjct: 121 LQQIEKKMKQIVQENIPVHRREVSREEAKQL--FAHDVLKLELLEAIPADELVTIYEQGE 178

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           ++DLCRGPHV+STG+++ F KLM V+GAYWRGDS   ML RIYG A+ T++EL  +  FL
Sbjct: 179 FYDLCRGPHVQSTGKLQHF-KLMHVSGAYWRGDSKNQMLQRIYGVAFATKEELRDHFIFL 237

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTP 297
           EE+EKR+HRKL +E+ LF  +E+  G+ F+   G  +   L SY+R  + K DY E+ TP
Sbjct: 238 EEAEKRNHRKLGKELSLFMFSEEAPGMPFYLANGQILRNELESYLRHLQAKYDYGEVRTP 297

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +++Q LW+QSGHWD Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYR+
Sbjct: 298 LMMNQRLWEQSGHWDHYKDNMYFTQV------DDQSFALKPMNCPGHMLIFKNALHSYRD 351

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFG V+R+E SG+L+GL+RVR F QDDAH+F T +Q+ +E      +I  +Y  
Sbjct: 352 LPIRMAEFGQVHRHEFSGALNGLLRVRTFCQDDAHIFATPQQIEDEIALALKIIDEVYNV 411

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF   + +LSTRP+  +G  ALWD AE  ++ VL+ +       I   +  G+GAFYGP
Sbjct: 412 FGFAYTI-ELSTRPDDYMGDLALWDQAEAALENVLNNLG------IAYTINAGDGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  +KDAI R  QC T+Q+DF LP +F+  Y+N H+E+  PV+IHRAVFGSI+RF+GI
Sbjct: 465 KIDIHIKDAIQRSHQCATVQLDFQLPEKFDLTYINEHNERVRPVVIHRAVFGSIDRFLGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE+F G  P WL+P Q  V  +  +   YA+++   L+   + ++ D R E +  KIRE
Sbjct: 525 LIEHFGGAFPTWLAPQQVQVIGVAEAHQGYAKQVVEALQQAEIRVQLDDRQEKLGKKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             ++KIP I++ GD+E + +++ +RR G       SL   I  +T
Sbjct: 585 AQLQKIPYIVVIGDREVANQTVAVRRHGQQNANDKSLQQLIEEVT 629


>gi|296331396|ref|ZP_06873868.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305676383|ref|YP_003868055.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|296151511|gb|EFG92388.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305414627|gb|ADM39746.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 638

 Score =  654 bits (1687), Expect = 0.0,   Method: Composition-based stats.
 Identities = 286/646 (44%), Positives = 423/646 (65%), Gaps = 16/646 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           M   + +  PDG IK +P   T  + A SIS SL KKA A  +NGK+ DLS  +  +  +
Sbjct: 1   MSKHVHIQLPDGQIKEYPKGITIKEAAGSISSSLQKKAAAGQVNGKLVDLSFKLEEDAEL 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            I+T +    L V+RH+ AH++A+AV+ ++ EV + IGP+IEDGFYYD   EQ  +S +L
Sbjct: 61  SIVTLDSQEGLQVLRHTSAHVLAQAVKRLYGEVSLGIGPVIEDGFYYDMKLEQSLTSGDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEK+M+ II  +    +  +S+E+A ELF  K E +K+E+L+ IP  E++TLY+QGE+
Sbjct: 121 EAIEKEMKNIINENLEIKRIEVSYEEAEELFAKKGEPFKLEMLKDIPRGEDITLYQQGEF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPH+ STG +K F KL +V+GAYWRGDS   +L R+YG A+  +++L  +L+ LE
Sbjct: 181 VDLCRGPHLPSTGMIKAF-KLTRVSGAYWRGDSENEVLQRVYGVAFQKKKDLDAHLHTLE 239

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+ KRDHRKL ++++LF  +E+  G+ F+  KG  I   L  + R  + K  YEE+ TP 
Sbjct: 240 EAAKRDHRKLGKQLELFMFSEEAPGMPFYLPKGQIIRNELERFSRELQTKAGYEEVRTPF 299

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +++Q LW+QSGHWD YR NM+  +       D   FA+KPMNCPGH+ +F + L SYR+L
Sbjct: 300 MMNQRLWEQSGHWDHYRDNMYFSEV------DDTRFAMKPMNCPGHMLIFKNSLYSYRDL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG V+R+E SG+L+G++RVR F QDDAH+F  ++Q+ +E  +   LI  +Y+ F
Sbjct: 354 PIRMAEFGQVHRHEYSGALNGMLRVRTFCQDDAHIFVREDQIESEIKEAIRLIDEVYRTF 413

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE   V+LSTRPE  +G D+LW+ +E  +  VL+ +       ++  V  G+GAFYGPK
Sbjct: 414 GFEYS-VELSTRPEDSLGDDSLWEASERALAYVLEELN------LSYEVNKGDGAFYGPK 466

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++ +KDA+ R  QC TIQ+DF +P +F+  Y+N H+EK  PV+IHRAVFGSI+RF GI+
Sbjct: 467 IDFHIKDALKRSHQCATIQLDFQMPEKFDLTYINEHNEKVRPVVIHRAVFGSIDRFFGIL 526

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+F G  P+WL+PIQ  +  ++    +Y +++   LK   +    D RNE + YKIRE 
Sbjct: 527 IEHFGGAFPVWLAPIQVQIIPVSHVHWDYCRKVQAELKRLGIRARIDERNEKLGYKIRES 586

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            ++KIP +++ GD E  + ++ +R+FG    + V        L K+
Sbjct: 587 QVQKIPYVLVLGDHEEQKDAVNVRQFGDQLIEHVPFQTFKDKLVKQ 632


>gi|33862697|ref|NP_894257.1| threonyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9313]
 gi|73919817|sp|Q7V8D2|SYT_PROMM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|33634613|emb|CAE20599.1| Threonyl-tRNA synthatase [Prochlorococcus marinus str. MIT 9313]
          Length = 640

 Score =  654 bits (1687), Expect = 0.0,   Method: Composition-based stats.
 Identities = 312/643 (48%), Positives = 430/643 (66%), Gaps = 16/643 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +  PDG+ K F    T  +VAES+   LAK A+A  +NG + D   P+  +  + IIT +
Sbjct: 4   IALPDGNKKKFDQPVTIMEVAESLGPGLAKAAIAGRVNGVLLDTCIPIEKDSEVNIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   +  IRHS AH++  AV+ ++PE ++AIGP+IEDGFYYD   + PF+  +L  IE +
Sbjct: 64  DQDGIETIRHSFAHLIGHAVKQLYPEAKMAIGPVIEDGFYYDIAYDHPFTPKDLEAIEAR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+E++  D     + +S E+AR+ FE + E YK+EI++ IP  E + LYR  E+ D+CRG
Sbjct: 124 MKELVKLDYDVNVEIVSKEEARKEFEKRCEPYKIEIVDEIPENEIIKLYRHQEYTDMCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +T  ++ F KLMKV+GAYWRGDSN+ ML RIYGTAW + +EL  YL  LEE+EKRD
Sbjct: 184 PHVPNTRHLRTF-KLMKVSGAYWRGDSNKTMLQRIYGTAWGSSKELKAYLKRLEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHL 304
           HR++A++M LFH  E+  G+IFWH KGW I+Q L  Y+R  +   DY+EI TPQV+D+ L
Sbjct: 243 HRRIAKQMSLFHTQEEAPGMIFWHAKGWAIYQVLEQYIRETLSLHDYQEIRTPQVVDRSL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHW+ ++ +MF       T  + R +A+KPMNCP HV +FN GLKSYR+LP+RLAE
Sbjct: 303 WEKSGHWEKFKDDMFT------TTSENREYAIKPMNCPCHVQIFNQGLKSYRDLPIRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS  RNEPSGSLHGLMRVR F QDDAH+FCT+ Q+  E  K  +L+  +Y+ FGF+ ++
Sbjct: 357 FGSCLRNEPSGSLHGLMRVRNFVQDDAHIFCTELQVQEEVSKFIDLVFEVYRSFGFDSVL 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +KLSTRPEKRVGSD +WD +E  +   LD         +   +L GEGAFYGPK E+ LK
Sbjct: 417 IKLSTRPEKRVGSDEIWDKSEKALSDALDA------KGLAWDLLPGEGAFYGPKIEFSLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D +GR WQCGTIQVDF++P R  A YV   S++  PVM+HRA+ GS ERFIGI+IE++ G
Sbjct: 471 DCLGRVWQCGTIQVDFSMPERLGASYVAEDSQRRTPVMLHRAILGSFERFIGILIEHYAG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
            LP+WL+P+Q +V  IT    +  Q+I   L +     E D RNE I +K+REH+++++P
Sbjct: 531 RLPIWLAPVQVVVMGITDRNAQACQDICKKLSALEYRTEVDLRNEKIGFKVREHTLQRVP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLP 647
            +II GDKE     + +R         + L     +L  E++ 
Sbjct: 591 FLIIIGDKEQQSGEVAVRTREGKDFGSMPLKGFTSLL-DEAIA 632


>gi|163790751|ref|ZP_02185177.1| threonyl-tRNA synthetase [Carnobacterium sp. AT7]
 gi|159873931|gb|EDP68009.1| threonyl-tRNA synthetase [Carnobacterium sp. AT7]
          Length = 645

 Score =  654 bits (1686), Expect = 0.0,   Method: Composition-based stats.
 Identities = 256/651 (39%), Positives = 410/651 (62%), Gaps = 22/651 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           S+IK+TFPDG++K+FP  ++  ++AESIS+ LAKKA+A   NG++ DL  P+  +GSIEI
Sbjct: 2   SEIKITFPDGAVKDFPAGSSTKEIAESISKGLAKKALAGKFNGELVDLIRPLESDGSIEI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           ITP+   +L ++RHS AH+MA A++ ++P+++  +GP I  GFYYD D E P + +++ +
Sbjct: 62  ITPDHEDALQILRHSTAHLMANALRRLYPDIKFGVGPAISTGFYYDTDSEAPITDEDIPK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE +M  I+  ++P +++ ++ E+A E+F+   + YKVE++ ++P  E +T+Y QG++ D
Sbjct: 122 IEAEMMAIVKENNPIIRKEVTREEALEIFK--DDPYKVELITNLPESEAITVYDQGDFVD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG HV STG+++ F KL+ +AGAYWRG+S+  M+ R+YGTA+  +++L +++   EE+
Sbjct: 180 LCRGVHVPSTGRIQVF-KLLSLAGAYWRGNSDNKMMQRVYGTAFFDKKDLKEFIQMREEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           + RDHRKL +E+DLF I+ + GSG+ FW  KG  I +T+  Y+  R+I   Y+ + TP +
Sbjct: 239 KLRDHRKLGKELDLFMISPEVGSGLPFWLPKGATIRRTIERYIVDREISLGYQHVYTPIM 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            D +L++ SGHWD Y  +MF          D     L+PMNCP H+ V+ + + SYRELP
Sbjct: 299 ADVNLYKTSGHWDHYHEDMFPPMDMG----DGEMLVLRPMNCPHHMMVYKNDVHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  T +D H F   +Q+  E  +   L++++Y DF 
Sbjct: 355 IRIAELGQMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIEEEFKRTLELMLAVYGDFN 414

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R           DA+W+ A+ ++K  +D +       ++     GE AFY
Sbjct: 415 ITDYRFRLSYRDPNNTEKYYDDDAMWEKAQTMLKAAMDDMG------LDYFEAEGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE-KCHPVMIHRAVFGSIERF 534
           GPK + ++K AIG +    TIQ+DF LP RF+  YV    E    PV+IHR +  ++ERF
Sbjct: 469 GPKLDVLVKTAIGIEETLSTIQLDFLLPERFDLTYVGEDGENNHRPVVIHRGIVSTMERF 528

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           +  +IE +KG  P WL+P+QA +  +      +YA EI   ++   + +E D RNE + Y
Sbjct: 529 VAYLIEEYKGAFPTWLAPVQATIIPVNLDMHTDYAYEIKKQMERIGMRVEVDERNEKMGY 588

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR    +KIP  ++ GD E  + ++ +R++G   T  ++L + +  ++KE
Sbjct: 589 KIRASQTQKIPYQLVVGDSEVQDNTVAVRKYGEKATVTINLSEYLETVSKE 639


>gi|148984063|ref|ZP_01817358.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
 gi|147923352|gb|EDK74465.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
 gi|301800452|emb|CBW33086.1| threonyl-tRNA synthetase [Streptococcus pneumoniae OXC141]
          Length = 647

 Score =  654 bits (1686), Expect = 0.0,   Method: Composition-based stats.
 Identities = 262/651 (40%), Positives = 406/651 (62%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  +  +GSIEI+
Sbjct: 1   MINITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGSIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQ 121
           TP+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D      S+++L +
Sbjct: 61  TPDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNTAGQISNEDLPR 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWF 180
           IE++MQ+I+  + P +++ ++ ++ARE+F+   + YK+E++E     E  +T+YRQGE+ 
Sbjct: 121 IEEEMQKIVKENFPSIREEVTKDEAREIFK--NDPYKLELIEEHSEDEGGLTIYRQGEYV 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ RIYGTAW  +++L  YL   EE
Sbjct: 179 DLCRGPHVPSTGRIQIFHLLH-VAGAYWRGNSDNAMMQRIYGTAWFDKKDLKNYLQMREE 237

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           +++RDHRKL +E+DLF I+++   G+ FW   G  I + L  Y+  +++   Y+ + TP 
Sbjct: 238 AKERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVNKELASGYQHVYTPP 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L++ SGHWD Y+ +MF          D   F L+PMNCP H+ VF H + SYREL
Sbjct: 298 LASVELYKTSGHWDHYQEDMFPTMDMG----DGEEFVLRPMNCPHHIQVFKHHVHSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y+DF
Sbjct: 354 PIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYEDF 413

Query: 419 GFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
              +   +LS R      K   +D +W++A+ +++  LD +       ++     GE AF
Sbjct: 414 NLTEYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAF 467

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K A+G++    TIQ+DF LP RF+  Y+ +  E   PVMIHR V  ++ERF
Sbjct: 468 YGPKLDIQIKTALGKEETLSTIQLDFLLPERFDLKYIGADGEDHRPVMIHRGVISTMERF 527

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
             I+IEN+KG  P WL+P Q  +  ++    V+YA E+   L+   +  + D RNE + +
Sbjct: 528 TAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVVKKLRDRGVRADVDERNEKMQF 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR     KIP  +I GDKE  + ++ +RR+G   TQ VS+ + +  +  +
Sbjct: 588 KIRASQTSKIPYQLIVGDKEMEDETVNVRRYGQKETQTVSVDNFVQAILAD 638


>gi|298503373|ref|YP_003725313.1| threonyl-tRNA synthetase [Streptococcus pneumoniae TCH8431/19A]
 gi|298238968|gb|ADI70099.1| threonyl-tRNA synthetase [Streptococcus pneumoniae TCH8431/19A]
          Length = 660

 Score =  654 bits (1686), Expect = 0.0,   Method: Composition-based stats.
 Identities = 263/651 (40%), Positives = 406/651 (62%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  +  +GSIEI+
Sbjct: 14  MINITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGSIEIV 73

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQ 121
           TP+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D      S+++L +
Sbjct: 74  TPDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNTAGQISNEDLPR 133

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWF 180
           IE++MQ+I+  + P +++ ++ ++ARE+F+   + YK+E++E     E  +T+YRQGE+ 
Sbjct: 134 IEEEMQKIVKENFPSIREEVTKDEAREIFK--NDPYKLELIEEHSEDEGGLTIYRQGEYV 191

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ RIYGTAW  +++L  YL   EE
Sbjct: 192 DLCRGPHVPSTGRIQIFHLLH-VAGAYWRGNSDNAMMQRIYGTAWFDKKDLKNYLQMREE 250

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           +++RDHRKL +E+DLF I+++   G+ FW   G  I + L  Y+  +++   Y+ + TP 
Sbjct: 251 AKERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVNKELASGYQHVYTPP 310

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L++ SGHWD Y+ +MF          D   F L+PMNCP H+ VF H + SYREL
Sbjct: 311 LASVELYKTSGHWDHYQEDMFPTMDMG----DGEEFVLRPMNCPHHIQVFKHHVHSYREL 366

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y+DF
Sbjct: 367 PIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYEDF 426

Query: 419 GFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
                  +LS R      K   +D +W++A+ +++  LD +       ++     GE AF
Sbjct: 427 NLTDYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAF 480

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K A+G++    TIQ+DF LP RF+  Y+ +  E   PVMIHR V  ++ERF
Sbjct: 481 YGPKLDIQIKTALGKEETLSTIQLDFLLPERFDLKYIGADGEDHRPVMIHRGVISTMERF 540

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
             I+IEN+KG  P WL+P Q  +  ++    V+YA E+A  L+   +  + D RNE + +
Sbjct: 541 TAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAKKLRDRGVRADVDERNEKMQF 600

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR     KIP  +I GDKE  + ++ +RR+G   TQ VS+ + +  +  +
Sbjct: 601 KIRASQTSKIPYQLIVGDKEMEDETVNVRRYGQKETQTVSVDNFVQAILAD 651


>gi|304309881|ref|YP_003809479.1| Threonyl-tRNA synthetase [gamma proteobacterium HdN1]
 gi|301795614|emb|CBL43813.1| Threonyl-tRNA synthetase [gamma proteobacterium HdN1]
          Length = 647

 Score =  654 bits (1686), Expect = 0.0,   Method: Composition-based stats.
 Identities = 306/633 (48%), Positives = 433/633 (68%), Gaps = 14/633 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEII 62
            I +T PDGS++ F    +G ++A SI   LAK ++A+ ++G+  DLS  +     +  I
Sbjct: 12  PIAITLPDGSVRQFERPVSGLEIAASIGPGLAKASIAMTVDGEQQDLSRVIDHNVQLAFI 71

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T + P +L ++RH  AH+MA+AV+ ++PE QV IGP IE+G+YYDF +   F+ ++L +I
Sbjct: 72  TRDKPEALEILRHDAAHVMAQAVKELYPETQVTIGPAIENGYYYDFCRATSFTPEDLEKI 131

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M EI+ RD+P +++     +A   FE + E +K EI+  +P  E +TLYRQGE+ DL
Sbjct: 132 EARMMEIVDRDTPIVREVWDRNEAIAFFEKQGELFKAEIIRDLPENETITLYRQGEFIDL 191

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ STG++ K FKL K+AGAYWR DS +  L RIYGTAW   +EL  +L  LEE+ 
Sbjct: 192 CRGPHLPSTGKLGKGFKLTKLAGAYWRADSTKQQLQRIYGTAWRDVKELKAHLTLLEEAA 251

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHR++ +++DLFH  E+  G++FWH KGW I+Q +  Y+R+  ++  Y+E+  PQ+LD
Sbjct: 252 KRDHRRIGKDLDLFHQQEEAPGMVFWHPKGWAIWQKVEQYVRKVYRESGYQEVRGPQILD 311

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             LW++SGHW++Y+ NMF       T  + RT+A+KPMNCPGHV ++N+ L SYRELP+R
Sbjct: 312 VSLWKKSGHWENYQENMFF------TESEKRTYAVKPMNCPGHVQIYNNTLHSYRELPIR 365

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
            AEFG  +RNEPSG+LHG+MRVR FTQDD H+FCT++Q+  E    H   + +Y DFGFE
Sbjct: 366 YAEFGGCHRNEPSGALHGIMRVRAFTQDDGHIFCTEDQVQAEVTAFHRQAMKVYADFGFE 425

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            I VKL+ RP+KR+G++  WD AEN ++  L     + ++      L GEGAFYGPK EY
Sbjct: 426 NISVKLALRPDKRIGTEDAWDKAENGLRAALAAAGVAWEE------LPGEGAFYGPKIEY 479

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            LKD+IGR WQ GTIQ D  +P R NA YV+ +S++  P+M+HRA+ GS+ERFIG++IE+
Sbjct: 480 HLKDSIGRAWQMGTIQFDPMMPERLNAEYVDENSQRQRPIMLHRAIVGSMERFIGVLIEH 539

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           F GN PLWLSP+  +V TIT  A ++A+ +   LK+  +  E D RNE I YK+REHS  
Sbjct: 540 FAGNFPLWLSPVPVVVATITDDARDWAETVVAQLKAAGIQAEADLRNEKIGYKVREHSNA 599

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           KIP I + G +EA+E+ + IRR GS   + V  
Sbjct: 600 KIPQIWVVGKQEAAEQKVAIRRLGSQQNEVVGF 632


>gi|182684576|ref|YP_001836323.1| threonyl-tRNA synthetase [Streptococcus pneumoniae CGSP14]
 gi|182629910|gb|ACB90858.1| threonyl-tRNA synthetase [Streptococcus pneumoniae CGSP14]
          Length = 660

 Score =  654 bits (1686), Expect = 0.0,   Method: Composition-based stats.
 Identities = 263/651 (40%), Positives = 406/651 (62%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  +  +GSIEI+
Sbjct: 14  MINITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGSIEIV 73

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQ 121
           TP+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D      S+++L +
Sbjct: 74  TPDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNTAGQISNEDLPR 133

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWF 180
           IE++MQ+I+  + P +++ ++ ++ARE+F+   + YK+E++E     E  +T+YRQGE+ 
Sbjct: 134 IEEEMQKIVKENFPSIREEVTKDEAREIFK--NDPYKLELIEEHSEDEGGLTIYRQGEYV 191

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ RIYGTAW  +++L  YL   EE
Sbjct: 192 DLCRGPHVPSTGRIQIFHLLH-VAGAYWRGNSDNAMMQRIYGTAWFDKKDLKNYLQMREE 250

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           +++RDHRKL +E+DLF I+++   G+ FW   G  I + L  Y+  +++   Y+ + TP 
Sbjct: 251 AKERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVNKELVSGYQHVYTPP 310

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L++ SGHWD Y+ +MF          D   F L+PMNCP H+ VF H + SYREL
Sbjct: 311 LASVELYKTSGHWDHYQEDMFPTMDMG----DGEEFVLRPMNCPHHIQVFKHHVHSYREL 366

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y+DF
Sbjct: 367 PIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYEDF 426

Query: 419 GFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
                  +LS R      K   +D +W++A+ +++  LD +       ++     GE AF
Sbjct: 427 NLTDYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAF 480

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K A+G++    TIQ+DF LP RF+  Y+ +  E   PVMIHR V  ++ERF
Sbjct: 481 YGPKLDIQIKTALGKEETLSTIQLDFLLPERFDLKYIGADGEDHRPVMIHRGVISTMERF 540

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
             I+IEN+KG  P WL+P Q  +  ++    V+YA E+A  L+   +  + D RNE + +
Sbjct: 541 TAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAKKLRDRGVRADVDERNEKMQF 600

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR     KIP  +I GDKE  + ++ +RR+G   TQ VS+ + +  +  +
Sbjct: 601 KIRASQTSKIPYQLIVGDKEMEDETVNVRRYGQKETQTVSVDNFVQAILAD 651


>gi|332201058|gb|EGJ15129.1| threonyl-tRNA synthetase [Streptococcus pneumoniae GA47901]
          Length = 647

 Score =  654 bits (1686), Expect = 0.0,   Method: Composition-based stats.
 Identities = 264/651 (40%), Positives = 407/651 (62%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  +  +GSIEI+
Sbjct: 1   MINITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGSIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQ 121
           TP+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D      S+++L +
Sbjct: 61  TPDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNTAGQISNEDLPR 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWF 180
           IE++MQ+I+  + P +++ ++ ++ARE+F+   + YK+E++E     E  +T+YRQGE+ 
Sbjct: 121 IEEEMQKIVKENFPSIREEVTKDEAREIFK--NDPYKLELIEEHSEDEGGLTIYRQGEYV 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ RIYGTAW  +++L  YL   EE
Sbjct: 179 DLCRGPHVPSTGRIQIFHLLH-VAGAYWRGNSDNAMMQRIYGTAWFDKKDLKNYLQMREE 237

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           +++RDHRKL +E+DLF I+++   G+ FW   G  I + L  Y+  +++   Y+ + TP 
Sbjct: 238 AKERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVNKELASGYQHVYTPP 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L++ SGHWD Y+ +MF          D   F L+PMNCP H+ VF H + SYREL
Sbjct: 298 LASVELYKTSGHWDHYQEDMFPTMDMG----DGEEFVLRPMNCPHHIQVFKHHVHSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y+DF
Sbjct: 354 PIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYEDF 413

Query: 419 GFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
                  +LS R      K   +D +W++A+ +++  LD +       ++     GE AF
Sbjct: 414 NLTDYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAF 467

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K A+G++    TIQ+DF LP RF+  Y+ + SE   PVMIHR V  ++ERF
Sbjct: 468 YGPKLDIQIKTALGKEETLSTIQLDFLLPERFDLKYIGADSEDHRPVMIHRGVISTMERF 527

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
             I+IEN+KG  P WL+P Q  +  ++    V+YA E+A  L+   +  + D RNE + +
Sbjct: 528 TAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAKKLRDRGVRADVDERNEKMQF 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR     KIP  +I GDKE  + ++ +RR+G   TQ VS+ + +  +  +
Sbjct: 588 KIRASQTSKIPYQLIVGDKEMEDETVNVRRYGQKETQTVSVDNFVQAILAD 638


>gi|116515338|ref|YP_816901.1| threonyl-tRNA synthetase [Streptococcus pneumoniae D39]
 gi|161410743|ref|NP_359065.2| threonyl-tRNA synthetase [Streptococcus pneumoniae R6]
 gi|73621971|sp|Q8DNX8|SYT_STRR6 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|122278253|sp|Q04JD7|SYT_STRP2 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|116075914|gb|ABJ53634.1| threonyl-tRNA synthetase [Streptococcus pneumoniae D39]
          Length = 647

 Score =  654 bits (1686), Expect = 0.0,   Method: Composition-based stats.
 Identities = 262/651 (40%), Positives = 405/651 (62%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  +  +GSIEI+
Sbjct: 1   MINITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGSIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQ 121
           TP+   +L ++RHS  H+ A+A + ++P++ + +GP IEDGFYYD D      S+++L +
Sbjct: 61  TPDHEDALPILRHSATHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDHTAGQISNEDLPR 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWF 180
           IE++MQ+I+  + P +++ ++ ++ARE+F+   + YK+E++E     E  +T+YRQGE+ 
Sbjct: 121 IEEEMQKIVKENFPSIREEVTKDEAREIFK--NDPYKLELIEEHSEDEGGLTIYRQGEYV 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ RIYGTAW  +++L  YL   EE
Sbjct: 179 DLCRGPHVPSTGRIQIFHLLH-VAGAYWRGNSDNAMMQRIYGTAWFDKKDLKNYLQMREE 237

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           +++RDHRKL +E+DLF I+++   G+ FW   G  I + L  Y+  +++   Y+ + TP 
Sbjct: 238 AKERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVNKELVSGYQHVYTPP 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L++ SGHWD Y+ +MF          D   F L+PMNCP H+ VF H + SYREL
Sbjct: 298 LASVELYKTSGHWDHYQEDMFPTMDMG----DGEEFVLRPMNCPHHIQVFKHHVHSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y+DF
Sbjct: 354 PIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYEDF 413

Query: 419 GFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
                  +LS R      K   +D +W++A+ +++  LD +       ++     GE AF
Sbjct: 414 NLTDYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAF 467

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K A+G++    TIQ+DF LP RF+  Y+ +  E   PVMIHR V  ++ERF
Sbjct: 468 YGPKLDIQIKTALGKEETLSTIQLDFLLPERFDLKYIGADGEDHRPVMIHRGVISTMERF 527

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
             I+IEN+KG  P WL+P Q  +  ++    V+YA E+A  L+   +  + D RNE + +
Sbjct: 528 TAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAKKLRDRGVRADVDERNEKMQF 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR     KIP  +I GDKE  + ++ +RR+G   TQ VS+ + +  +  +
Sbjct: 588 KIRASQTSKIPYQLIVGDKEMEDETVNVRRYGQKETQTVSVDNFVQAILAD 638


>gi|319744717|gb|EFV97060.1| threonine--tRNA ligase [Streptococcus agalactiae ATCC 13813]
          Length = 647

 Score =  654 bits (1686), Expect = 0.0,   Method: Composition-based stats.
 Identities = 270/650 (41%), Positives = 409/650 (62%), Gaps = 23/650 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            IK+TFPDG+I+ F    T  ++A+SIS SLAKKA+A   NG++ D +  +  +GSIEI+
Sbjct: 1   MIKITFPDGAIREFESGITTFEIAQSISNSLAKKALAGKFNGQLIDTTRAIEEDGSIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQ 121
           TP+   +L V+RHS AH+ A+A + ++P++ + +GP I+DGFYYD D +    S+D+L++
Sbjct: 61  TPDHEDALGVLRHSAAHLFAQAAKRLFPDLCLGVGPAIQDGFYYDTDNKSGQISNDDLSR 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE++M++I+  + P +++ +S E+A ELF+   + YKVE++    A++ +T+YRQGE+ D
Sbjct: 121 IEEEMKKIVKENHPCIREEISKEEALELFK--DDPYKVELISE-HAEDGLTVYRQGEFVD 177

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ R+YGTAW  +++L  YL   EE+
Sbjct: 178 LCRGPHVPSTGRIQVFHLL-NVAGAYWRGNSDNAMMQRVYGTAWFDKKDLKAYLKRREEA 236

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF +  +   G+ FW   G  I + L  Y+  ++I   Y+ + TP +
Sbjct: 237 KERDHRKLGKELDLFMVNPEVGQGLPFWLPNGATIRRELERYIVDKEIASGYQHVYTPPM 296

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
                ++ SGHWD YR +MF          D   F L+PMNCP H+ V+ H + SYRELP
Sbjct: 297 ASVEFYKTSGHWDHYREDMFPTMDMG----DGEEFVLRPMNCPHHIEVYKHHVHSYRELP 352

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  T +DAH+F T EQ+ +E LK  NLI  IY+DF 
Sbjct: 353 IRIAELGMMHRYEKSGALTGLQRVREMTLNDAHIFVTPEQIKDEFLKALNLIAEIYEDFN 412

Query: 420 FEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R      K   +D +W++A+ ++K  +D         ++     GE AFY
Sbjct: 413 LTDYRFRLSYRDPEDKHKYYDNDEMWENAQAMLKEAMDDFG------LDYFEAEGEAAFY 466

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G +    TIQ+DF LP RF+  Y+ +  E+  P+MIHR    ++ERF 
Sbjct: 467 GPKLDIQVKTALGNEETLSTIQLDFLLPERFDLKYIGADGEEHRPIMIHRGGISTMERFT 526

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IE +KG  P WL+P Q  V  I++   ++YA E+A +LK   +  E D RNE + YK
Sbjct: 527 AILIETYKGAFPTWLAPQQVSVIPISNEAHIDYAWEVARVLKDRGIRAEVDDRNEKMQYK 586

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IR    +KIP  +I GDKE  E+ + +RR+GS  T+  S+ + +  +  +
Sbjct: 587 IRAAQTQKIPYQLIVGDKEMEEKGVNVRRYGSKATETKSIEEFVESILAD 636


>gi|213650865|ref|ZP_03380918.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. J185]
          Length = 622

 Score =  654 bits (1686), Expect = 0.0,   Method: Composition-based stats.
 Identities = 294/632 (46%), Positives = 423/632 (66%), Gaps = 16/632 (2%)

Query: 24  SDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMA 82
            DVA  I   LAK  +A  +NG++ D SD +  + ++ IIT +D   L +IRHSCAH++ 
Sbjct: 1   MDVALDIGPGLAKATIAGRVNGELVDASDLIENDATLSIITAKDEEGLEIIRHSCAHLLG 60

Query: 83  EAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLS 142
            A++ +WP  ++AIGP++++GFYYD D ++  + +++  +EK+M E+  ++   +K+ +S
Sbjct: 61  HAIKQLWPHTKMAIGPVVDNGFYYDVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVS 120

Query: 143 HEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLM 201
             +ARE F  + E+YKV IL E+I   +   LY   E+ D+CRGPHV +      F KLM
Sbjct: 121 WHEARETFVKRGESYKVSILDENIAHDDKPGLYHHEEYVDMCRGPHVPNMRFCHHF-KLM 179

Query: 202 KVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED 261
           K AGAYWRGDSN  ML RIYGTAW  ++ L  YL  LEE+ KRDHRK+ +++DL+H+ E+
Sbjct: 180 KTAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEE 239

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
             G++FWH  GW IF+ L  ++R K+K+  Y+E+  P ++D+ LW+++GHWD+Y+  MF 
Sbjct: 240 APGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFT 299

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
                 T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+AEFGS +RNEPSG+LHGL
Sbjct: 300 ------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGL 353

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           MRVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  FGFEKI+VKLSTRP+KR+GSD +
Sbjct: 354 MRVRGFTQDDAHIFCTEEQIRDEVNACIRMVYDMYSTFGFEKIVVKLSTRPDKRIGSDEM 413

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDF 500
           WD AE  +   L+      ++ I     LGEGAFYGPK E+ L D + R WQCGT+Q+DF
Sbjct: 414 WDRAEADLAVALE------ENNIPFEYQLGEGAFYGPKIEFTLYDCLDRAWQCGTVQLDF 467

Query: 501 NLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTI 560
           +LPSR +A YV   +E+  PVMIHRA+ GS+ERFIGI+ E F G  P WL+P+Q +V  I
Sbjct: 468 SLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVVMNI 527

Query: 561 TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
           T S  EY  E+   L++  + ++ D RNE I +KIREH+++++P +++CGDKE     + 
Sbjct: 528 TDSQSEYVNELTQKLQNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVA 587

Query: 621 IRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           +R         + + D I  L +E      Q+
Sbjct: 588 VRTRRGKDLGSLDVNDVIEKLQQEIRSRSLQQ 619


>gi|326623540|gb|EGE29885.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Dublin str. 3246]
          Length = 622

 Score =  653 bits (1685), Expect = 0.0,   Method: Composition-based stats.
 Identities = 294/632 (46%), Positives = 421/632 (66%), Gaps = 16/632 (2%)

Query: 24  SDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMA 82
            DVA  I   LAK  +A  +NG++ D SD +  + ++ IIT +D   L +IRHSCAH++ 
Sbjct: 1   MDVALDIGPGLAKATIAGRVNGELVDASDLIENDATLAIITAKDEEGLEIIRHSCAHLLG 60

Query: 83  EAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLS 142
            A++ +WP  ++AIGP++++GFYYD D ++  + +++  +EK+M E+  ++   +K+ +S
Sbjct: 61  HAIKQLWPHTKMAIGPVVDNGFYYDVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVS 120

Query: 143 HEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLM 201
              ARE F  + E YKV IL E+I   +   LY   E+ D+CRGPHV +      F KLM
Sbjct: 121 WHDARETFVKRGETYKVAILDENIAHDDKPGLYHHEEYVDMCRGPHVPNMRFCHHF-KLM 179

Query: 202 KVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED 261
           K AGAYWRGDSN  ML RIYGTAW  ++ L  YL  LEE+ KRDHRK+ +++DL+H+ E+
Sbjct: 180 KTAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEE 239

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
             G++FWH  GW IF+ L  ++R K+K+  Y+E+  P ++D+ LW+++GHWD+Y+  MF 
Sbjct: 240 APGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFT 299

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
                 T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+AEFGS +RNEPSG+LHGL
Sbjct: 300 ------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGL 353

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           MRVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  FGFEKI+VKLSTRP+KR+GSD +
Sbjct: 354 MRVRGFTQDDAHIFCTEEQIRDEVNACIRMVYDMYSTFGFEKIVVKLSTRPDKRIGSDEM 413

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDF 500
           WD AE  +   L+      ++ I     LGEGAFYGPK E+ L D + R WQCGT+Q+DF
Sbjct: 414 WDRAEADLAVALE------ENNIPFEYQLGEGAFYGPKIEFTLYDCLDRAWQCGTVQLDF 467

Query: 501 NLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTI 560
           +LPSR +A YV   +E+  PVMIHRA+ GS+ERFIGI+ E F G  P WL+P+Q +V  I
Sbjct: 468 SLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVVMNI 527

Query: 561 TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
           T S  EY  E+   L++  + ++ D RNE I +KIREH+++++P +++CGDKE     + 
Sbjct: 528 TDSQSEYVNELTQKLQNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVA 587

Query: 621 IRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           +R         + + D I  L +E      Q+
Sbjct: 588 VRTRRGKDLGSLDVNDVIEKLQQEIRSRSLQQ 619


>gi|312622904|ref|YP_004024517.1| threonyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002]
 gi|312203371|gb|ADQ46698.1| threonyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002]
          Length = 639

 Score =  653 bits (1685), Expect = 0.0,   Method: Composition-based stats.
 Identities = 276/644 (42%), Positives = 405/644 (62%), Gaps = 17/644 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
             I +T PDG         +  +  ++IS  L K+AVA  I+G + DL   + ++ S E+
Sbjct: 2   DKITVTLPDGKAVEAEKGISAMEFIKTISMRLYKEAVACKIDGVLKDLWTSLQKDCSFEV 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           +T  +     V  H+ +HI+A+AV+ ++ + V++ IGP I++GFYYDFD E+  + + L 
Sbjct: 62  VTFSNDEGKKVYWHTTSHILAQAVKRLFGDKVKLGIGPAIDNGFYYDFDIEESITREILE 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IE++MQ+II  D    +  LS E+A +L + + E YKVE++  IP  E ++ Y+QGE+ 
Sbjct: 122 KIEEEMQKIIKEDLKIERFELSREEAIKLMQQRGENYKVELINDIPEGEVISFYKQGEFV 181

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLC GPH+ STG+VK F KL+ VAGAYWRG+S   ML RIYG ++  + +L +YL  LEE
Sbjct: 182 DLCTGPHLPSTGRVKAF-KLLSVAGAYWRGNSKNKMLQRIYGISYEKKSQLDEYLTMLEE 240

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQV 299
           ++KRDHRKL RE+DLF I E+G G  F+  KG  I   L  + R + K   Y+EI TP +
Sbjct: 241 AKKRDHRKLGRELDLFDIFEEGPGFPFFLPKGMIIRNILEDFWREEHKKRGYQEIKTPIM 300

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           L + LW QSGHWD Y+ NM+  K       D + FA+KPMNCPG + V+     SYRELP
Sbjct: 301 LTKDLWVQSGHWDHYKGNMYFTKI------DDQEFAIKPMNCPGSILVYKRKSHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
            RL E G V+R+E SG LHGLMRVR FTQDDAH+F    Q+ +E   + +LI   Y  FG
Sbjct: 355 ERLCELGLVHRHELSGVLHGLMRVRCFTQDDAHIFMLPSQIKDEIKGVIDLIDYFYSVFG 414

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F+   V+LSTRPE  +G+D  W+ AE  +K  L+ +       I+  +  G+GAFYGPK 
Sbjct: 415 FKYH-VELSTRPENSMGTDEQWNMAETALKEALEEVG------IDYKINEGDGAFYGPKI 467

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           ++ L+D++ R WQC TIQ+DF +P RF+ +Y+     K  PVM+HR VFGSIERFI I+ 
Sbjct: 468 DFHLEDSLKRTWQCATIQLDFQMPERFDLYYIGEDGAKHRPVMLHRVVFGSIERFIAILT 527

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E+F G  P+WL+P Q  +  ++ +  +YA +I+ +LK +   +E DFR+ET+ YKIR+  
Sbjct: 528 EHFAGAFPVWLAPTQIRIIPVSDNFNDYAAKISQILKENGFRVEEDFRSETVGYKIRDAQ 587

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           ++KIP ++I G+KE  + +I +R          ++ + + ++  
Sbjct: 588 LQKIPYMVIVGEKEQRDNTIAVRDRKKGDLGSFTIDEFVSMVKD 631


>gi|50952758|gb|AAT90291.1| putative threonyl-tRNA synthetase [uncultured proteobacterium
           eBACred25D05]
          Length = 650

 Score =  653 bits (1685), Expect = 0.0,   Method: Composition-based stats.
 Identities = 325/654 (49%), Positives = 448/654 (68%), Gaps = 10/654 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
             I +TFPDG+ + +    T   VA++IS SL+KKA++  ++G   DL  P+ ++  + I
Sbjct: 2   EKIIITFPDGNKREYDAGITAEKVAQTISISLSKKAISADLDGAHWDLQWPIYKDAELSI 61

Query: 62  ITPED-PRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            T ++  R++ ++RH  AHIMA AVQ IWP+V+V IGP+I  G+YYDFD E+PF+ ++L 
Sbjct: 62  NTLKNKERAIELVRHDLAHIMARAVQEIWPKVKVTIGPVINHGWYYDFDHEEPFTPEDLG 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IE+KM+EII        +    EKA E + +KKE YK+E++++IP  +N+ +Y  G+W 
Sbjct: 122 KIERKMREIINLRDVVRTELWDREKAIEYYTAKKEPYKIELIDAIPENDNIRMYWHGDWQ 181

Query: 181 DLCRGPHVRSTGQ-VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           DLCRGPH ++T Q     FKLM VAGAYWRGDSNR ML RIYG A+  ++ L ++L  LE
Sbjct: 182 DLCRGPHFQNTAQVPADAFKLMSVAGAYWRGDSNRQMLQRIYGVAFLNKENLREHLNMLE 241

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+ KRDHRKL +EMDLFH+ E+  G IFWH  GWKI+  L  YMRR+ +   Y E+NTPQ
Sbjct: 242 EAAKRDHRKLGKEMDLFHMQEEAPGQIFWHPNGWKIYTLLQDYMRRQQEVGGYVEVNTPQ 301

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHWD Y+ +MF V+  ++  ++    ALKPMNCP HV V+N G+KSYR+L
Sbjct: 302 VVDRKLWEESGHWDKYQEHMFIVEVDEEHAREKSINALKPMNCPCHVQVYNQGIKSYRDL 361

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFGS  R EPSG+LHG+MRVRGFTQDDAH+FC ++Q+ +E  K  N +  +YKD 
Sbjct: 362 PLRMAEFGSCNRYEPSGALHGIMRVRGFTQDDAHIFCQEDQIESETKKFINFLSGVYKDL 421

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF K  VK S RP+ R GSD +WD AE  +K        ++    +  +  GEGAFYGPK
Sbjct: 422 GFPKFAVKFSDRPKNRAGSDDVWDKAEGALKSA------TTSAGFDFELNPGEGAFYGPK 475

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E++L DAIGRDWQCGT+QVDF LP R +A ++    +K  PVM+HRAV GS ERFIGI+
Sbjct: 476 LEFVLTDAIGRDWQCGTLQVDFVLPDRLDANFIGEDGQKHRPVMLHRAVLGSFERFIGIL 535

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IENF G LP WL+P Q +V +I + A EY  EI + LK   +  E+D RNE I+YK+REH
Sbjct: 536 IENFAGRLPFWLAPRQVVVASIVTDANEYCTEIVDALKLVGIRAESDLRNEKISYKVREH 595

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           S+ K+P I+  G++E  +R+I +R  G   T+ ++    I  L KE +PPD ++
Sbjct: 596 SVAKVPTILAIGNREVEDRAITVRTLGEKQTKTINFDQVILELQKEGIPPDMRQ 649


>gi|222152709|ref|YP_002561885.1| threonyl-tRNA synthetase [Streptococcus uberis 0140J]
 gi|254783540|sp|B9DU13|SYT_STRU0 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|222113521|emb|CAR41303.1| threonyl-tRNA synthetase [Streptococcus uberis 0140J]
          Length = 648

 Score =  653 bits (1685), Expect = 0.0,   Method: Composition-based stats.
 Identities = 262/651 (40%), Positives = 403/651 (61%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +TFPDG+++ F    T  D+A+SIS SLAKKA+A   NG++ D + P+  +GSIEI+
Sbjct: 1   MINITFPDGAVREFESGITTFDIAQSISNSLAKKALAGKFNGQLIDTNRPIDTDGSIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQ 121
           TP+   +  V+RHS AH+ A+A + ++P++ + +GP I +GFYYD D      S+++L +
Sbjct: 61  TPDHEDAFGVLRHSAAHLFAQAAKRLFPDIHLGVGPAIAEGFYYDTDNSSGQISNEDLPR 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKE-NVTLYRQGEWF 180
           IE +MQ+I+  + P +++ ++ E+A E+F+   + YK+E++         +T+YRQGE+ 
Sbjct: 121 IEAEMQKIVKENYPCIREEVTKEEALEIFK--DDPYKIELINEHSDDAAGLTIYRQGEFV 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ R+YGTAW  +++L  YL  LEE
Sbjct: 179 DLCRGPHVPSTGRIQVFHLL-NVAGAYWRGNSDNAMMQRVYGTAWFDKKDLKAYLTRLEE 237

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           +++RDHRKL +E+DLF I+++   G+ FW   G  I +TL  Y+  +++   Y+ + TP 
Sbjct: 238 AKERDHRKLGKELDLFMISQEVGQGLPFWLPDGATIRRTLERYITDKELASGYQHVYTPP 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L++ SGHW+ Y+ +MF          D   F L+PMNCP H+ V+ + + SYREL
Sbjct: 298 LASVELYKTSGHWEHYQEDMFPTMDMG----DGEEFVLRPMNCPHHIQVYKNHVHSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  T +D H+F T EQ+  E  +   LII +Y+DF
Sbjct: 354 PIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHLFVTPEQIQEEFQRALQLIIDVYEDF 413

Query: 419 GFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
                  +LS R  K       +D +W++A++++K  LD +       +      GE AF
Sbjct: 414 NLTDYRFRLSYRDPKDTEKYYDNDEMWENAQSMLKAALDEMG------VEYFEAEGEAAF 467

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K A+G +    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF
Sbjct: 468 YGPKLDIQVKTALGNEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMIHRGVISTMERF 527

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINY 593
             I+IE +KG  P WL+P Q  V  I++   ++YA E+A  L+   +  + D RNE + Y
Sbjct: 528 TAILIETYKGAFPTWLAPHQVTVIPISNEAHIDYAWEVAKALRDRGIRADVDDRNEKMQY 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR     KIP  +I GDKE  ++S+ +RR+GS  T   SL + +  +  +
Sbjct: 588 KIRASQTSKIPYQLIVGDKEMEDKSVNVRRYGSKATHTESLSEFMDTILAD 638


>gi|51893696|ref|YP_076387.1| threonyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
 gi|73919833|sp|Q67LA3|SYT_SYMTH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|51857385|dbj|BAD41543.1| threonyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
          Length = 651

 Score =  653 bits (1685), Expect = 0.0,   Method: Composition-based stats.
 Identities = 266/658 (40%), Positives = 416/658 (63%), Gaps = 20/658 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           M S + +T PDGS++ +P   T ++    I   LAK A+A  ++G++ DLS  +  + ++
Sbjct: 1   MSSVVHVTLPDGSVREYPQGITIAEAVAQIGPRLAKAALAAKVDGRLVDLSARLEKDCTL 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           +++T +D     V RH+  HIMA+AV+ ++PE ++ +GP +E+ FYYDFD  +P + ++L
Sbjct: 61  QVLTFKDEEGREVFRHTSTHIMAQAVKRLFPEAKLTVGPPLENSFYYDFDLPRPLTPEDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IE +M +I+  D P ++Q +  E+A+  F  + E YKV +++ IP  E V++Y QGE+
Sbjct: 121 EKIEAEMAKIVEADYPIVRQEVDREEAKRFFAERGEDYKVLLVDKIPEDEVVSIYTQGEF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLC GPH+ STG+VK F KL+ VAGAYW G+     L R+YGT++ ++++L  YL+ LE
Sbjct: 181 TDLCVGPHLPSTGRVKAF-KLLSVAGAYWEGNQANKQLQRVYGTSFESKKDLEDYLFRLE 239

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+ +RDHR+L  E+ L+   E   G  FW  KG+++++ L ++ R+ +    YEE++TP 
Sbjct: 240 EARRRDHRRLGPELGLYRFEEVAPGFAFWLDKGYRLYRELENWSRKLQEARGYEEVSTPW 299

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++   L++ SGHW  YR NMF ++  D      + FA KPMNCP H  ++   ++SYR+L
Sbjct: 300 IVSSKLYETSGHWQHYRQNMFEIRAED------QDFATKPMNCPCHCVLYKSQIRSYRDL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+++AE+G + R E SG+LHGL+RVRGF QDDAH+F   +Q+  +  ++  L+ +IY   
Sbjct: 354 PLKIAEYGPLSRFEASGTLHGLLRVRGFHQDDAHLFVRPDQIEEQIREVIGLVDTIYGTL 413

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           G E  + KLSTRPE  +G   LW++AE  +   LD +  S        +  G+GAFYGPK
Sbjct: 414 GLEYEI-KLSTRPEDFMGDIELWNEAEAALARALDGMGRS------YKLNPGDGAFYGPK 466

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++ + DA+GR WQC T+Q+DF LP +F+  Y+    ++  PVMIHRA+ G++ERFIGI+
Sbjct: 467 LDFDVTDALGRKWQCATVQLDFQLPIKFDLTYIGEDGKEHRPVMIHRAIMGTLERFIGIL 526

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
            E++ GN PLW++P+QA V  IT     YA E+   L+   L +E D+RNE + YKIRE 
Sbjct: 527 TEHYAGNFPLWMAPVQARVLPITDRHHAYAGEVVAKLQEAGLRVEGDYRNEKVGYKIREA 586

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE----SLPPDCQK 652
            + KIP I++ GDKEA   ++ +RR G      + L D + +   E    ++   C+K
Sbjct: 587 ELLKIPFILVVGDKEAEAGAVAVRRRGMKDLGPMPLADFLALAQSEIASKAMDEACRK 644


>gi|301794619|emb|CBW37067.1| threonyl-tRNA synthetase [Streptococcus pneumoniae INV104]
          Length = 647

 Score =  653 bits (1685), Expect = 0.0,   Method: Composition-based stats.
 Identities = 264/651 (40%), Positives = 406/651 (62%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +TFPDG+I+ F    T  ++A+SIS SLAKKA+A   NGK+ D +  +  +GSIEI+
Sbjct: 1   MINITFPDGAIREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGSIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQ 121
           TP+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D      S+++L +
Sbjct: 61  TPDHGDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNTAGQISNEDLPR 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWF 180
           IE++MQ+I+  + P +++ ++ ++ARE+F+   + YK+E++E     E  +T+YRQGE+ 
Sbjct: 121 IEEEMQKIVKENFPSIREEVTKDEAREIFK--NDPYKLELIEEHSEDEGGLTIYRQGEYV 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ RIYGTAW  +++L  YL   EE
Sbjct: 179 DLCRGPHVPSTGRIQIFHLLH-VAGAYWRGNSDNAMMQRIYGTAWFDKKDLKNYLQMREE 237

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           +++RDHRKL +E+DLF I+++   G+ FW   G  I + L  Y+  +++   Y+ + TP 
Sbjct: 238 AKERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVNKELASGYQHVYTPP 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L++ SGHWD Y+ +MF          D   F L+PMNCP H+ VF H + SYREL
Sbjct: 298 LASVELYKTSGHWDHYQEDMFPTMDMG----DGEEFVLRPMNCPHHIQVFKHHVHSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y+DF
Sbjct: 354 PIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYEDF 413

Query: 419 GFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
                  +LS R      K   +D +W++A+ +++  LD +       ++     GE AF
Sbjct: 414 NLTDYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAF 467

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K A+G++    TIQ+DF LP RF+  Y+ +  E   PVMIHR V  ++ERF
Sbjct: 468 YGPKLDIQIKTALGKEETLSTIQLDFLLPERFDLKYIGADGEDHRPVMIHRGVISTMERF 527

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
             I+IEN+KG  P WL+P Q  +  ++    V+YA E+A  L+   +  + D RNE + +
Sbjct: 528 TAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAKKLRDRGVRADVDERNEKMQF 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR     KIP  +I GDKE  + ++ +RR+G   TQ VS+ + +  +  +
Sbjct: 588 KIRASQTSKIPYQLIVGDKEMEDETVNVRRYGQKETQTVSVDNFVQAILAD 638


>gi|221232374|ref|YP_002511527.1| threonyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669]
 gi|254783539|sp|B8ZM32|SYT_STRPJ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|220674835|emb|CAR69409.1| threonyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669]
          Length = 647

 Score =  653 bits (1685), Expect = 0.0,   Method: Composition-based stats.
 Identities = 262/651 (40%), Positives = 405/651 (62%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  +  +GSIEI+
Sbjct: 1   MINITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGSIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQ 121
           TP+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D      S+++L +
Sbjct: 61  TPDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNTAGQISNEDLPR 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWF 180
           IE++MQ+I+  + P +++ ++ ++ARE+F+   + YK+E++E     E  +T+YRQGE+ 
Sbjct: 121 IEEEMQKIVKENFPSIREEVTKDEAREIFK--NDPYKLELIEEHSEDEGGLTIYRQGEYV 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ RIYGTAW  +++L  YL   EE
Sbjct: 179 DLCRGPHVPSTGRIQIFHLLH-VAGAYWRGNSDNAMMQRIYGTAWFEKKDLKNYLQMREE 237

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           +++RDHRKL +E+DLF I+++   G+ FW   G  I + L  Y+  +++   Y+ + TP 
Sbjct: 238 AKERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVNKELASGYQHVYTPP 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L++ SGHWD Y+ +MF          D   F L+PMNCP H+ VF H + SYREL
Sbjct: 298 LASVELYKTSGHWDHYQEDMFPTMDMG----DGEEFVLRPMNCPHHIQVFKHHVHSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y+DF
Sbjct: 354 PIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYEDF 413

Query: 419 GFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
                  +LS R      K   +D +W++A+ +++  LD +       ++     GE AF
Sbjct: 414 NLTDYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAF 467

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K A+G++    TIQ+DF LP RF+  Y+ +  E   PVMIHR    ++ERF
Sbjct: 468 YGPKLDIQIKTALGKEETLSTIQLDFLLPERFDLKYIGADGEDHRPVMIHRGAISTMERF 527

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
             I+IEN+KG  P WL+P Q  +  ++    V+YA E+A  L+   +  + D RNE + +
Sbjct: 528 TAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAKKLRDRGVRADVDERNEKMQF 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR     KIP  +I GDKE  + ++ +RR+G   TQ VS+ + +  +  +
Sbjct: 588 KIRASQTSKIPYQLIVGDKEMEDETVNVRRYGQKETQTVSVDNFVQAILAD 638


>gi|327490276|gb|EGF22064.1| threonine--tRNA ligase [Streptococcus sanguinis SK1058]
          Length = 647

 Score =  653 bits (1685), Expect = 0.0,   Method: Composition-based stats.
 Identities = 254/651 (39%), Positives = 408/651 (62%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  +  +G+IEI+
Sbjct: 1   MIKITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGTIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQ 121
           TP+   +L ++RHS AH+ A+A + ++P++ + +GP I+DGFYYD D E    S+++L +
Sbjct: 61  TPDHEDALDILRHSAAHLFAQAARRLFPDIHLGVGPAIQDGFYYDTDNEAGQISNEDLPR 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWF 180
           IE++M++I+  + P +++ ++ ++ARE+F+   + YK+E++E     E  +T+YRQGE+ 
Sbjct: 121 IEEEMKKIVKENFPSIREEVTKDEAREIFK--NDPYKLELIEEHSEDEGGLTIYRQGEYV 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ R+YGTAW  +++L +YL   EE
Sbjct: 179 DLCRGPHVPSTGRIQIFHLL-NVAGAYWRGNSDNAMMQRVYGTAWFDKKDLKKYLQMREE 237

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           +++RDHRKL +E+DLF I+++   G+ FW   G  + + L  Y+  +++   Y+ + TP 
Sbjct: 238 AKERDHRKLGKELDLFMISQEVGQGLPFWLPNGATVRRELERYIVDKELASGYQHVYTPP 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L++ SGHW+ Y+ +MF          D   F L+PMNCP H+ V+ H + SYREL
Sbjct: 298 LASVELYKTSGHWEHYQEDMFPTMDMG----DGEEFVLRPMNCPHHIQVYKHHVHSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y DF
Sbjct: 354 PIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYADF 413

Query: 419 GFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
              +   +LS R      K   +D +W++A+ +++  LD +       ++     GE AF
Sbjct: 414 NLTEYRFRLSLRDPQDTHKYYDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAF 467

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K A+G +    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF
Sbjct: 468 YGPKLDIQVKTALGNEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMIHRGVISTMERF 527

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINY 593
             I+IEN+KG  P WL+P Q  +  +++   ++YA ++A  L+   +  + D RNE + Y
Sbjct: 528 TAILIENYKGAFPTWLAPHQVTLIPVSNEAHIDYAWQMAKKLRDKGVRADVDERNEKMQY 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR     KIP  +I GDKE  + ++ +RR+G   T  + + + +  +  +
Sbjct: 588 KIRASQTSKIPYQLIVGDKEVEDGTVNVRRYGQKETHTIPVDEFVEQILAD 638


>gi|325694840|gb|EGD36745.1| threonine--tRNA ligase [Streptococcus sanguinis SK150]
          Length = 647

 Score =  653 bits (1685), Expect = 0.0,   Method: Composition-based stats.
 Identities = 256/651 (39%), Positives = 409/651 (62%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+TFPDG+++ F   AT  ++A+SIS SLAKKA+A   NGK+ D +  +  +G+IEI+
Sbjct: 1   MIKITFPDGAVREFEFGATTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGAIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQ 121
           TP+   +L ++RHS AH+ A+A + ++P++ + +GP I+DGFYYD D E    S+++L +
Sbjct: 61  TPDHEDALDILRHSAAHLFAQAARRLFPDIHLGVGPAIQDGFYYDTDNEAGQISNEDLPR 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWF 180
           IE++M++I+  + P +++ ++ ++ARE+F+   + YK+E++E     E  +T+YRQGE+ 
Sbjct: 121 IEEEMKKIVKENFPSIREEVTKDEAREIFK--NDPYKLELIEEHSEDEGGLTIYRQGEYV 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ R+YGTAW  +++L +YL   EE
Sbjct: 179 DLCRGPHVPSTGRIQIFHLL-NVAGAYWRGNSDNAMMQRVYGTAWFDKKDLKKYLQMREE 237

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           +++RDHRKL +E+DLF I+++   G+ FW   G  + + L  Y+  +++   Y+ + TP 
Sbjct: 238 AKERDHRKLGKELDLFMISQEVGQGLPFWLPNGATVRRELERYIVDKELASGYQHVYTPP 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L++ SGHW+ Y+ +MF          D   F L+PMNCP H+ V+ H + SYREL
Sbjct: 298 LASVELYKTSGHWEHYQEDMFPTMDMG----DGEEFVLRPMNCPHHIQVYKHHVHSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y DF
Sbjct: 354 PIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYADF 413

Query: 419 GFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
              +   +LS R      K   +D +W++A+ +++  LD +       ++     GE AF
Sbjct: 414 NLTEYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEM------DVDYFEAEGEAAF 467

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K A+G +    TIQ+DF LP RF+  YV +  E+  PVMIHR V  ++ERF
Sbjct: 468 YGPKLDIQVKTALGNEETLSTIQLDFLLPERFDLKYVGADGEEHRPVMIHRGVISTMERF 527

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINY 593
             I+IEN+KG  P WL+P Q  +  +++   ++YA ++A  L+   +  + D RNE + Y
Sbjct: 528 TAILIENYKGAFPTWLAPHQVTLIPVSNEAHIDYAWQVAKKLRDKGVRADVDERNEKMQY 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR     KIP  +I GDKE  + ++ +RR+G   T  + + + +  +  +
Sbjct: 588 KIRASQTSKIPYQLIVGDKEVEDGTVNVRRYGQKETHTIPVDEFVEQILAD 638


>gi|322383766|ref|ZP_08057517.1| threonyl-tRNA synthetase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321151978|gb|EFX44921.1| threonyl-tRNA synthetase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 649

 Score =  653 bits (1684), Expect = 0.0,   Method: Composition-based stats.
 Identities = 253/650 (38%), Positives = 396/650 (60%), Gaps = 21/650 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            I++T P+G+I+ +P   T  +VA SIS  L K+AVA  ++G+  DLS P+    ++EI 
Sbjct: 1   MIQVTLPNGAIREYPKGTTVGEVAASISSGLKKQAVAGKMDGQPVDLSRPIEYNAAVEIW 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPE--VQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           T +    L V RHS AH+MA+A++ I+ E  V++ IGP+IE GFYYD D E   + ++L 
Sbjct: 61  TLDSEEGLEVYRHSTAHLMAQALKRIYGEKAVKLGIGPVIEGGFYYDIDMETSLTPEDLG 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IEK+M++II  D P  ++ +S E+A  ++E  ++  K+E++   P    +T+Y QGE+F
Sbjct: 121 KIEKEMEKIIKEDLPITRRVVSKEEAIRIYEEIEDPLKLELIHEFPEDATITIYDQGEFF 180

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ STG++K F KL+ VAGAYWRGDS+  ML RIYGTA+  + +L ++L+ LEE
Sbjct: 181 DLCRGPHLPSTGRIKAF-KLLSVAGAYWRGDSDNKMLQRIYGTAFPKKSQLEEHLHLLEE 239

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           ++KRDHRKL +++ +F  + +   G+  W   G  I +TL  Y+   + K  Y+ + TP 
Sbjct: 240 AKKRDHRKLGKDLKIFSFSREVGQGLPLWLPNGATIRRTLERYIVDLEEKLGYQHVYTPV 299

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           + +  L++ SGHW+ YR +MF     D+         L+PMNCP H+ V+ + L SYR+L
Sbjct: 300 LANVDLYKTSGHWEHYREDMFPPMQLDN-----EELVLRPMNCPHHMMVYKNELHSYRDL 354

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G+++R E SG+L GL RVR  T +DAH+FC  +Q+  E  ++  LI  +Y DF
Sbjct: 355 PIRIAELGTMHRYEMSGALTGLHRVRAMTLNDAHIFCRPDQIKEEFARVITLIRQVYADF 414

Query: 419 GFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           G      +LS R  +       +D +W+ ++ ++K V++ +      R+      GE AF
Sbjct: 415 GITDYRFRLSYRDPQDTDKYFPNDEMWEMSQRMLKEVVEEL------RLPYYEAEGEAAF 468

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K A+ ++    T Q+DF LP RF   YV    +K  PV+IHR +  ++ER 
Sbjct: 469 YGPKLDVQIKTALKKEETLSTAQLDFLLPERFELEYVGEDGQKHRPVVIHRGIVSTMERM 528

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
              ++ENF G LP WL P+QA +  ++S+  +YA+E+ + LK   + +  D RNE + YK
Sbjct: 529 TAFLLENFAGALPTWLCPVQAKILPVSSAFNDYAKEMEDRLKQAGIRVAADLRNEKLGYK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IRE  ++K+P +++ G+ E    S  +RR G       S    I ++ +E
Sbjct: 589 IRESQLEKVPFMLVVGENEKQSGSFSVRRRGEGDLGVHSADALIQMIREE 638


>gi|282906079|ref|ZP_06313934.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282331371|gb|EFB60885.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Btn1260]
          Length = 645

 Score =  653 bits (1684), Expect = 0.0,   Method: Composition-based stats.
 Identities = 267/650 (41%), Positives = 402/650 (61%), Gaps = 21/650 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
             I + FPD + K F    T  D+A+SIS  L KKAVA   NG++ DL+ P+  +GSIEI
Sbjct: 2   EQINIQFPDVNKKAFDKGTTTEDIAQSISPGLRKKAVAGKFNGQLVDLTKPLETDGSIEI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +TP    +L V+RHS AH+MA A++ ++  V+  +GP+IE GFYYDFD +Q  SSD+  Q
Sbjct: 62  VTPGSEEALEVLRHSTAHLMAHAIKRLYGNVKFGVGPVIEGGFYYDFDIDQNISSDDFEQ 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK M++I+  +    ++ +S ++A+EL     + YK+E++++IP  ENVTLY QG++ D
Sbjct: 122 IEKTMKQIVNENMKIERKVVSRDEAKEL--FSNDEYKLELIDAIPEDENVTLYSQGDFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG HV ST ++K+F KL+  AGAYWRGDSN  ML RIYGTA+  ++EL  +L  LEE 
Sbjct: 180 LCRGVHVPSTAKIKEF-KLLSTAGAYWRGDSNNKMLQRIYGTAFFDKKELKAHLQMLEER 238

Query: 242 EKRDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRK+ +E++LF +    G+G+  W   G  I + +  Y+  +++   Y+ + TP +
Sbjct: 239 KERDHRKIGKELELFTNSQLVGAGLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVL 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +  L++ SGHWD Y+ +MF     D+T     +  L+PMNCP H+ ++ +   SYRELP
Sbjct: 299 ANVDLYKTSGHWDHYQEDMFPPMQLDET----ESMVLRPMNCPHHMMIYANKPHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G+++R E SG++ GL RVRG T +D+H+F   +Q+  E  ++ N+II +YKDFG
Sbjct: 355 IRIAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVNMIIDVYKDFG 414

Query: 420 FEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           FE    +LS R      K    D +W+ AEN++K   D +  S ++ I      GE AFY
Sbjct: 415 FEDYSFRLSYRDPEDKEKYFDDDDMWNKAENMLKEAADELGLSYEEAI------GEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G++    T Q+DF LP RF+  Y+    E   PV+IHR V  ++ERF+
Sbjct: 469 GPKLDVQVKTAMGKEETLSTAQLDFLLPERFDLTYIGQDGEHHRPVVIHRGVVSTMERFV 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             + E  KG  P WL+P Q  +  +      +YA+++ + LKS  + +  D RNE + YK
Sbjct: 529 AFLTEETKGAFPTWLAPKQVQIIPVNVDLHYDYARQLQDELKSQGVRVSIDDRNEKMGYK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IRE  ++KIP  I+ GDKE     + +R++GS   + V   + I  L  E
Sbjct: 589 IREAQMQKIPYQIVVGDKEVENNQVNVRQYGSQDQETVEKDEFIWNLVDE 638


>gi|262044121|ref|ZP_06017196.1| threonine-tRNA ligase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259038520|gb|EEW39716.1| threonine-tRNA ligase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 622

 Score =  653 bits (1684), Expect = 0.0,   Method: Composition-based stats.
 Identities = 292/632 (46%), Positives = 422/632 (66%), Gaps = 16/632 (2%)

Query: 24  SDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMA 82
            DVA  I   LAK  +A  +NG++ D  DP+  + ++ IIT +D   L +IRHSCAH++ 
Sbjct: 1   MDVALDIGPGLAKATIAGRVNGELVDACDPIESDSTLSIITAKDEEGLEIIRHSCAHLLG 60

Query: 83  EAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLS 142
            A++ +WP  ++AIGP++++GFYYD D +   + +++  +EK+M E+  ++   +K+ +S
Sbjct: 61  HAIKQLWPNTKMAIGPVVDNGFYYDVDLDHTLTQEDIDALEKRMHELAEKNYDVIKKKVS 120

Query: 143 HEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLM 201
             +ARE F  + E+YKV IL E+I   +   LY   E+ D+CRGPHV +      F KLM
Sbjct: 121 WHEARETFVKRGESYKVSILDENIAHDDKPGLYHHEEYIDMCRGPHVPNMRFCHHF-KLM 179

Query: 202 KVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED 261
           K AGAYWRGDSN  ML RIYGTAW  ++ L  YL  LEE+ KRDHRK+ +++DL+H+ E+
Sbjct: 180 KTAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEE 239

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
             G++FWH  GW IF+ L +++R K+K+  Y+E+  P ++D+ LW+++GHWD+Y+  MF 
Sbjct: 240 APGMVFWHNDGWTIFRELETFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFT 299

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
                 T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+AEFGS +RNEPSG+LHGL
Sbjct: 300 ------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGL 353

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           MRVRGFTQDDAH+FCT++Q+ +E      ++  +Y  FGFEKI+VKLSTRPEKR+GSD  
Sbjct: 354 MRVRGFTQDDAHIFCTEDQVRDEVNACIRMVYDMYSTFGFEKIVVKLSTRPEKRIGSDET 413

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDF 500
           WD AE  +   L+      ++ I     LGEGAFYGPK E+ L D + R WQCGT+Q+DF
Sbjct: 414 WDRAEADLAVALE------ENNIPFEYQLGEGAFYGPKIEFTLYDCLDRAWQCGTVQLDF 467

Query: 501 NLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTI 560
           +LP R +AFYV  ++E+  PVMIHRA+ GS+ERFIGI+ E F G  P W++P+Q +V  I
Sbjct: 468 SLPQRLSAFYVGENNERQVPVMIHRAILGSLERFIGILTEEFAGFFPTWIAPVQVVVMNI 527

Query: 561 TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
           T S  EY  E+   L++  + ++ D RNE I +KIREH+++++P +++CGDKE     + 
Sbjct: 528 TDSQAEYVNELTRKLQNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVA 587

Query: 621 IRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           +R         +   + I  L +E      Q+
Sbjct: 588 VRTRRGKDLGSMDENEVIEKLQQEIRSRSLQQ 619


>gi|327470637|gb|EGF16093.1| threonine--tRNA ligase [Streptococcus sanguinis SK330]
          Length = 645

 Score =  653 bits (1683), Expect = 0.0,   Method: Composition-based stats.
 Identities = 256/651 (39%), Positives = 408/651 (62%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  +  +G+IEI+
Sbjct: 1   MIKITFPDGAVREFESSVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGAIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQ 121
           TP+   +L ++RHS AH+ A+A + ++P++ + +GP I+DGFYYD D E    S+++L +
Sbjct: 61  TPDHEDALDILRHSAAHLFAQAARRLFPDIHLGVGPAIQDGFYYDTDNEVGQISNEDLPR 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWF 180
           IE++M++I+  + P +++ ++ ++ARE+F+   + YK+E++E     E  +T+YRQGE+ 
Sbjct: 121 IEEEMKKIVKENFPSIREEVTKDEAREIFK--NDPYKLELIEEHSEDEGGLTIYRQGEYV 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ RIYGTAW  +++L +YL   EE
Sbjct: 179 DLCRGPHVPSTGRIQIFHLL-NVAGAYWRGNSDNAMMQRIYGTAWFDKKDLKKYLQMREE 237

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           +++RDHRKL +E+DLF I+++   G+ FW   G  + + L  Y+  +++   Y+ + TP 
Sbjct: 238 AKERDHRKLGKELDLFMISQEVGQGLPFWLPNGATVRRELERYIVDKELASGYQHVYTPP 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L++ SGHW+ Y+ +MF          D   F L+PMNCP H+ V+ H + SYREL
Sbjct: 298 LASVELYKTSGHWEHYQEDMFPTMDMG----DGEEFVLRPMNCPHHIQVYKHHVHSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y DF
Sbjct: 354 PIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYADF 413

Query: 419 GFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
              +   +LS R      K   +D +W++A+ +++  LD +       ++     GE AF
Sbjct: 414 NLTEYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAF 467

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K A+G +    TIQ+DF LP RF+  YV +  E+  PVMIHR V  ++ERF
Sbjct: 468 YGPKLDIQVKTALGNEETLSTIQLDFLLPERFDLKYVGADGEEHRPVMIHRGVISTMERF 527

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINY 593
             I+IEN+KG  P WL+P Q  +  +++   ++YA ++A  L+   +  + D RNE + Y
Sbjct: 528 TAILIENYKGAFPTWLAPHQVTLIPVSNEAHIDYAWQVAKKLRDKGVRADVDERNEKMQY 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR     KIP  +I GDKE  + ++ +RR+G   T  + + + +  +  +
Sbjct: 588 KIRASQTSKIPYQLIVGDKEVEDSTVNVRRYGQKETHTIPVDEFVEQILAD 638


>gi|304403794|ref|ZP_07385456.1| threonyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
 gi|304346772|gb|EFM12604.1| threonyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
          Length = 637

 Score =  653 bits (1683), Expect = 0.0,   Method: Composition-based stats.
 Identities = 269/631 (42%), Positives = 407/631 (64%), Gaps = 18/631 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           +I +T PDG+I+ +    T  +VA S+  +L K AVA  ++ ++ DL+ P+  + ++E++
Sbjct: 2   EINVTLPDGAIRRYTQGTTVGEVALSLHANLYKNAVAGKLDNELVDLNRPIEQDSAVELV 61

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPE--VQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           T +      + RHS AH+MA+A++ ++P   V++ IGP+IEDGFYYD D  +P SS++L 
Sbjct: 62  TLDSQLGRDIHRHSTAHVMAQAIKRLFPNQSVKLGIGPVIEDGFYYDIDIAKPLSSEDLV 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IE +M  II  + P +++ +S E+A + FE  +E  K+E++  +PA   +T+Y QGE+ 
Sbjct: 122 AIEYEMNHIIGENLPIVRRAVSREEAVQTFEECEEPLKLELIRDLPADAVITIYEQGEFS 181

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ STG++K F KL+ VAGAYWRGDSN  +L RIYGTA+  + +L ++L+ +EE
Sbjct: 182 DLCRGPHLPSTGRIKAF-KLLHVAGAYWRGDSNNKVLQRIYGTAFPKKAQLDEHLHRIEE 240

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           ++KRDHRKL +E+ LF  +E+  G+ F+  KG  I   L S+ R  +    Y E+ TP +
Sbjct: 241 AKKRDHRKLGKELGLFMFSEEAPGMPFYLPKGMAIRNELESFAREIQRLRAYAEVRTPLM 300

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           ++  +W+QSGHWD Y+ NM+  +       D   FALKPMNCPGH+ ++ +   SYRELP
Sbjct: 301 MNNRIWEQSGHWDHYKDNMYFTQV------DETKFALKPMNCPGHMLIYKNSRHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +RL+EFG V+R+E SG+L G+MRVR F QDDAH+F    Q+  E   +  LI  IY  FG
Sbjct: 355 IRLSEFGQVHRHEFSGALSGMMRVRTFCQDDAHLFVLPSQIEEEIGLVIELIGHIYDVFG 414

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F    ++LSTRP+  +G++ALWD AE  ++ VLD         I   +  G+GAFYGPK 
Sbjct: 415 F-AYKIELSTRPDDYMGAEALWDQAEQSLQSVLDA------RGIAYTINEGDGAFYGPKI 467

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           ++ + DA+ R WQCGTIQ+DF +P +F+  Y+   + K  PV+IHRAV+GSI+RFIGI+ 
Sbjct: 468 DFHILDALQRSWQCGTIQLDFQMPEKFDLTYIGEDNLKHRPVVIHRAVYGSIDRFIGILT 527

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E++ G  PLWL+P+QA +  ++   ++ A  +   L+   +  E D RNE + YKIRE  
Sbjct: 528 EHYAGAFPLWLAPVQAKLLPVSDQYLDDAYAVKKQLEEAGIRAEVDDRNEKLGYKIREAQ 587

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
           ++K P ++I G+ E    S+ +R+       
Sbjct: 588 LEKTPYMLILGENERGSGSVSVRKRSGEELG 618


>gi|300904575|ref|ZP_07122412.1| threonyl-tRNA synthetase [Escherichia coli MS 84-1]
 gi|300403488|gb|EFJ87026.1| threonyl-tRNA synthetase [Escherichia coli MS 84-1]
 gi|315257476|gb|EFU37444.1| threonyl-tRNA synthetase [Escherichia coli MS 85-1]
          Length = 622

 Score =  653 bits (1683), Expect = 0.0,   Method: Composition-based stats.
 Identities = 293/632 (46%), Positives = 421/632 (66%), Gaps = 16/632 (2%)

Query: 24  SDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMA 82
            DVA  I   LAK  +A  +NG++ D  D +  +  + IIT +D   L +IRHSCAH++ 
Sbjct: 1   MDVALDIGPGLAKACIAGRVNGELVDACDLIENDAQLSIITAKDEEGLEIIRHSCAHLLG 60

Query: 83  EAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLS 142
            A++ +WP  ++AIGP+I++GFYYD D ++  + +++  +EK+M E+  ++   +K+ +S
Sbjct: 61  HAIKQLWPHTKMAIGPVIDNGFYYDVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVS 120

Query: 143 HEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLM 201
             +ARE F ++ E+YKV IL E+I   +   LY   E+ D+CRGPHV +      F KLM
Sbjct: 121 WHEARETFANRGESYKVSILDENIAHDDKPGLYFHEEYVDMCRGPHVPNMRFCHHF-KLM 179

Query: 202 KVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED 261
           K AGAYWRGDSN  ML RIYGTAW  ++ L  YL  LEE+ KRDHRK+ +++DL+H+ E+
Sbjct: 180 KTAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEE 239

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
             G++FWH  GW IF+ L  ++R K+K+  Y+E+  P ++D+ LW+++GHWD+Y+  MF 
Sbjct: 240 APGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFT 299

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
                 T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+AEFGS +RNEPSGSLHGL
Sbjct: 300 ------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGL 353

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           MRVRGFTQDDAH+FCT+EQ+ +E      L+  +Y  FGFEKI+VKLSTRPEKR+GSD +
Sbjct: 354 MRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEKIVVKLSTRPEKRIGSDEM 413

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDF 500
           WD AE  +   L+      ++ I     LGEGAFYGPK E+ L D + R WQCGT+Q+DF
Sbjct: 414 WDRAEADLAVALE------ENNIPFEYQLGEGAFYGPKIEFTLYDCLDRAWQCGTVQLDF 467

Query: 501 NLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTI 560
           +LPSR +A YV   +E+  PVMIHRA+ GS+ERFIGI+ E F G  P WL+P+Q ++  I
Sbjct: 468 SLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVIMNI 527

Query: 561 TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
           T S  +Y  E+   L +  + ++ D RNE I +KIREH+++++P +++CGDKE     + 
Sbjct: 528 TDSQSDYVNELTQKLSNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVA 587

Query: 621 IRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           +R         + + + I  L +E      ++
Sbjct: 588 VRTRRGKDLGSMDVNEVIEKLQQEIRSRSLKQ 619


>gi|327252835|gb|EGE64489.1| threonyl-tRNA synthetase [Escherichia coli STEC_7v]
          Length = 622

 Score =  653 bits (1683), Expect = 0.0,   Method: Composition-based stats.
 Identities = 294/632 (46%), Positives = 422/632 (66%), Gaps = 16/632 (2%)

Query: 24  SDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMA 82
            DVA  I   LAK  +A  +NG++ D  D +  +  + IIT +D   L +IRHSCAH++ 
Sbjct: 1   MDVALDIGPGLAKACIAGRVNGELVDACDLIENDAQLSIITAKDEEGLEIIRHSCAHLLG 60

Query: 83  EAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLS 142
            A++ +WP  ++AIGP+I++GFYYD D ++  + +++  +EK+M E+  ++   +K+ +S
Sbjct: 61  HAIKQLWPHTKMAIGPVIDNGFYYDVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVS 120

Query: 143 HEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLM 201
             +ARE F ++ E+YKV IL E+I   +   LY   E+ D+CRGPHV +      F KLM
Sbjct: 121 WHEARETFANRGESYKVSILDENIAHDDKPGLYFHEEYVDMCRGPHVPNMRFCHHF-KLM 179

Query: 202 KVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED 261
           K AGAYWRGDSN  ML RIYGTAW  ++ L  YL  LEE+ KRDHRK+ +++DL+H+ E+
Sbjct: 180 KTAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEE 239

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
             G++FWH  GW IF+ L  ++R K+K+  Y+E+  P ++D+ LW+++GHWD+Y+  MF 
Sbjct: 240 APGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFT 299

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
                 T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+AEFGS +RNEPSGSLHGL
Sbjct: 300 ------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGL 353

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           MRVRGFTQDDAH+FCT+EQ+ +E      L+  +Y  FGFEKI+VKLSTRPEKR+GSD +
Sbjct: 354 MRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEKIVVKLSTRPEKRIGSDEM 413

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDF 500
           WD AE  +   L+      ++ I     LGEGAFYGPK E+ L D + R WQCGT+Q+DF
Sbjct: 414 WDRAEADLAVALE------ENNIPFEYQLGEGAFYGPKIEFTLYDCLDRAWQCGTVQLDF 467

Query: 501 NLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTI 560
           +LPSR +A YV   +E+  PVMIHRA+ GS+ERFIGI+ E F G  P+WL+P+Q ++  I
Sbjct: 468 SLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAGFFPIWLAPVQVVIMNI 527

Query: 561 TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
           T S  EY  E+   L +  + ++ D RNE I +KIREH+++++P +++CGDKE     + 
Sbjct: 528 TDSQSEYVNELTQKLSNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVA 587

Query: 621 IRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           +R         + + + I  L +E      ++
Sbjct: 588 VRTRRGKDLGSMDVNEVIEKLQQEIRSRSLKQ 619


>gi|313885013|ref|ZP_07818765.1| threonine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
 gi|312619704|gb|EFR31141.1| threonine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
          Length = 651

 Score =  652 bits (1682), Expect = 0.0,   Method: Composition-based stats.
 Identities = 263/651 (40%), Positives = 404/651 (62%), Gaps = 22/651 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           + IKLTFPDG+ K F    T  DVA SIS SL K A+A  ++G++ D   P+  +G+IEI
Sbjct: 2   AKIKLTFPDGNQKEFDAGVTIEDVAGSISNSLKKAALAGKLDGQIIDFHQPIEQDGAIEI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           IT + P +L ++RHS AH+MA+A++ ++PE+   +GP IE+GFYYD DK +  +  +L +
Sbjct: 62  ITDKSPEALDLLRHSTAHLMAQAMKRLYPEIHFGVGPAIENGFYYDTDKPEALTDADLPK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK+M++I++++ P   + +S E+A ++   + + YKVE++  +P  E +++Y QGE+ D
Sbjct: 122 IEKEMKKIVSQNYPIEGRVVSREEALDI--FQDDPYKVELINDLPENEEISVYTQGEFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG HV STG++K F KL+ +AGAYWRG+S+  M+ R+YGTA+  Q +L   L   EE+
Sbjct: 180 LCRGGHVPSTGKIKAF-KLLSLAGAYWRGNSDNKMMQRVYGTAFFKQADLDAELKRREEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQV 299
           ++RDHRKL +E+ LF I+++ GSG+ FW  KG  I + +  Y M ++I   YE + TP +
Sbjct: 239 KERDHRKLGKELGLFMISQEAGSGLPFWLPKGATIRRVIERYIMDKEIALGYEHVYTPVM 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHW  Y+ +MF          D     L+PMNCP H+ ++ + + SYRELP
Sbjct: 299 AKTDLYKTSGHWAHYKDDMFPPMDMG----DGEMLVLRPMNCPHHMLIYKNEIHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  T +D+H+F   +Q+ +E  ++ NLI  +Y+DF 
Sbjct: 355 IRIAELGMMHRYEKSGALSGLQRVREMTLNDSHIFVRPDQIKDEFKRVLNLIADVYEDFN 414

Query: 420 FEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R      K     A+W+ AE+++K  +D +       +     +GE AFY
Sbjct: 415 ITDYRFRLSYRDPEDKEKYFDDYAMWEKAESMLKEAMDELG------LEYFEAIGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK-CHPVMIHRAVFGSIERF 534
           GPK +   K AIG +    TIQ+DF LP RF+  YV    +    PV+IHR V  ++ERF
Sbjct: 469 GPKLDVQFKTAIGLEETMSTIQLDFLLPERFDLTYVGEDGQNTHRPVVIHRGVVSTMERF 528

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAV-EYAQEIANLLKSHHLSIETDFRNETINY 593
           +  +IE +KG  P WL+P+QAI+  ++     +  +EI + L+     +E D RNE + Y
Sbjct: 529 VAYLIEEYKGAFPTWLAPVQAILLPVSPEHHGDRVEEIYHALQEAGFRVEMDLRNEKLGY 588

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIRE    KIP  I+ GD+E  + ++ IRR+G+  +  VSL D I +L ++
Sbjct: 589 KIREAQTSKIPYQIVIGDQEVEDGTVNIRRYGAQDSNSVSLEDFIALLNED 639


>gi|125718378|ref|YP_001035511.1| threonyl-tRNA synthetase [Streptococcus sanguinis SK36]
 gi|166225508|sp|A3CP56|SYT_STRSV RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|125498295|gb|ABN44961.1| Threonyl-tRNA synthetase, putative [Streptococcus sanguinis SK36]
          Length = 647

 Score =  652 bits (1682), Expect = 0.0,   Method: Composition-based stats.
 Identities = 255/651 (39%), Positives = 408/651 (62%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  +  +G+IEI+
Sbjct: 1   MIKITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGAIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQ 121
           TP+   +L ++RHS AH+ A+A + ++P++ + +GP I+DGFYYD D E    S+++L +
Sbjct: 61  TPDHEDALDILRHSAAHLFAQAARRLFPDIHLGVGPAIQDGFYYDTDNEAGQISNEDLPR 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWF 180
           IE++M++I+  + P +++ ++ ++ARE+F+   + YK+E++E     E  +T+YRQ E+ 
Sbjct: 121 IEEEMKKIVKENFPSIREEVTKDEAREIFK--NDPYKLELIEEHSEDEGGLTIYRQSEYV 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ R+YGTAW  +++L +YL   EE
Sbjct: 179 DLCRGPHVPSTGRIQIFHLL-NVAGAYWRGNSDNAMMQRVYGTAWFDKKDLKKYLQMREE 237

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           +++RDHRKL +E+DLF I+++   G+ FW   G  + + L  Y+  +++   Y+ + TP 
Sbjct: 238 AKERDHRKLGKELDLFMISQEVGQGLPFWLPNGATVRRELERYIVDKELASGYQHVYTPP 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L++ SGHW+ Y+ +MF          D   F L+PMNCP H+ V+ H + SYREL
Sbjct: 298 LASVELYKTSGHWEHYQEDMFPTMDMG----DGEEFVLRPMNCPHHIQVYKHHVHSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y DF
Sbjct: 354 PIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYADF 413

Query: 419 GFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
              +   +LS R      K   +D +W++A+ +++  LD +       ++     GE AF
Sbjct: 414 NLTEYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDFFEAEGEAAF 467

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K A+G +    TIQ+DF LP RF+  YV +  E+  PVMIHR V  ++ERF
Sbjct: 468 YGPKLDIQVKTALGNEETLSTIQLDFLLPERFDLKYVGADGEEHRPVMIHRGVISTMERF 527

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINY 593
             I+IEN+KG  P WL+P Q  +  +++   ++YA ++A  L+   +  + D RNE + Y
Sbjct: 528 TAILIENYKGAFPTWLAPHQVTLIPVSNEAHIDYAWQVAKKLRDKGVRADVDERNEKMQY 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR     KIP  +I GDKE  + ++ +RR+G   T  V++ + +  +  +
Sbjct: 588 KIRASQTSKIPYQLIVGDKEVEDGTVNVRRYGQKETHTVAVDEFVEQILAD 638


>gi|257467995|ref|ZP_05632091.1| threonyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
 gi|317062281|ref|ZP_07926766.1| threonine-tRNA ligase [Fusobacterium ulcerans ATCC 49185]
 gi|313687957|gb|EFS24792.1| threonine-tRNA ligase [Fusobacterium ulcerans ATCC 49185]
          Length = 637

 Score =  652 bits (1682), Expect = 0.0,   Method: Composition-based stats.
 Identities = 299/644 (46%), Positives = 412/644 (63%), Gaps = 16/644 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K+  P G IK F       +VA+SIS SLAKKAVAV I+G + D++  + R+  +E I 
Sbjct: 1   MKVELPSGDIKEFEGQVNMFEVAKSISNSLAKKAVAVKIDGTLMDMATILDRDAKVEFIP 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +      VIRHS AH+MA+AV  ++P  +VAIGP IE+GFYYDFD ++ F+ ++L +IE
Sbjct: 61  ADSEEGEEVIRHSTAHLMAQAVIRLFPGTKVAIGPAIENGFYYDFDPKEQFTEEDLVKIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M++I+  +    +  ++ E+A E FE   E YKVEI++ I   E ++ Y+QGE+ DLC
Sbjct: 121 AEMKKIVKENEKIERVMMTREEAIEHFEKLGEIYKVEIIKEIAQGEILSFYKQGEFMDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV ST  +K F KL  VAGAYWRGDSN  ML RIYG A++ + +L  YL  LEE+E+
Sbjct: 181 RGPHVPSTSYLKAF-KLKSVAGAYWRGDSNNKMLQRIYGFAFSDEAKLKAYLTLLEEAER 239

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQ 302
           RDHRKL +E+DLF ++E G G   +  KG  I  TLI   RR+     Y+EI TP +L++
Sbjct: 240 RDHRKLGKELDLFFVSEYGPGFPIFLPKGMVIRNTLIDLWRREHTLAGYQEITTPIMLNK 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW +YR NM+       +  D   FA+KPMNCPG +  + + L SY++ P+R 
Sbjct: 300 ELWEISGHWFNYRENMYT------STIDETEFAIKPMNCPGGILAYKYQLHSYKDFPIRC 353

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            E G+V+R+E SG+LHGLMRVR FTQDDAH+F T +Q+  E + +  LI   Y      +
Sbjct: 354 GELGTVHRHEFSGALHGLMRVRSFTQDDAHIFMTPDQIEEEIIGVVELIDKFYSKLFGFE 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             ++LST+PEK +GS+ +W+ AE  + G LD I           +  G+GAFYGPK ++ 
Sbjct: 414 YHIELSTKPEKAIGSNEIWEKAEAALAGALDKIGKP------YKLNPGDGAFYGPKLDFK 467

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDAIGR WQCGTIQ+DFNLP RF+  Y+    EK  PVMIHR V+GSIERFIGI+IE+F
Sbjct: 468 IKDAIGRTWQCGTIQLDFNLPERFDISYIGEDGEKHRPVMIHRVVYGSIERFIGILIEHF 527

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH-SIK 601
            G  PLWL+P Q  + TI    V YA+EI   L+   +  E D R E+I YKIRE     
Sbjct: 528 AGAFPLWLAPTQVKILTINDEVVPYAKEIFKALQERGIRAEIDDRAESIGYKIREANGKY 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           K+P+ +I G  E   R + IR+FGS   + + L + + I+  E+
Sbjct: 588 KVPVQLILGKNEVENREVNIRKFGSQQQESMKLDEFLDIIVDEA 631


>gi|182419627|ref|ZP_02950872.1| threonyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237665561|ref|ZP_04525549.1| threonine--tRNA ligase [Clostridium butyricum E4 str. BoNT E
           BL5262]
 gi|182376517|gb|EDT74094.1| threonyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237658508|gb|EEP56060.1| threonine--tRNA ligase [Clostridium butyricum E4 str. BoNT E
           BL5262]
          Length = 636

 Score =  652 bits (1682), Expect = 0.0,   Method: Composition-based stats.
 Identities = 280/642 (43%), Positives = 407/642 (63%), Gaps = 16/642 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           I +   DGSIK    ++T  D+A+SISR+L K A+   +NG + DL+  ++    + I++
Sbjct: 3   INIKLKDGSIKEIEDNSTVFDLAQSISRNLGKSALVGEVNGCLVDLNYKLKNNDEVNILS 62

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +  +++ VIRHS AHIMA+AV+ ++   ++AIGP I +GFYYDFD + P   ++L +IE
Sbjct: 63  DDSEKAVEVIRHSSAHIMAQAVKRLYKNAKLAIGPSIANGFYYDFDMDTPIIKEDLEKIE 122

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M +I+  +  F +  +S E+A ++ +   E YKVE++  +P  E ++LY+QG++ DLC
Sbjct: 123 KEMNKIVKENLKFERIDVSKEEALKIMKDNDEIYKVELINDLPEGEKISLYKQGDYIDLC 182

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ ST   K F KL+ VAGAYWRG+    ML R+YG A++  +EL  +L  LEE++K
Sbjct: 183 RGPHIPSTKYAKAF-KLISVAGAYWRGNEKNKMLQRVYGVAFSNLKELEIHLNNLEEAKK 241

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           RDHRKL +E+ LF  AE+G G  F+  KG  +  +LI + R+   +  Y E+ TP +L++
Sbjct: 242 RDHRKLGKELKLFTFAEEGPGFPFFLPKGVILKNSLIDFWRKIHYEAGYVEVETPIMLNK 301

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW  Y+ NM+          D   FALKPMNCPG + V+     SYR+ P+R+
Sbjct: 302 KLWETSGHWYHYKENMYTSMI------DDEEFALKPMNCPGGMIVYKSDSHSYRDFPMRV 355

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            E G V+R+E SG+LHGLMRVR FTQDDAH+F   EQ+ +E   +  LI  +Y  FGF+ 
Sbjct: 356 GELGRVHRHELSGALHGLMRVRAFTQDDAHIFMLPEQIKSEIKGVVELIDKVYSIFGFKY 415

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +GSD  W  AE+ ++G LD +       +   +  G+GAFYGPK ++ 
Sbjct: 416 H-VELSTRPEDSMGSDEEWKMAEDSLRGALDELN------LQYVINEGDGAFYGPKIDFH 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+D+IGR WQCGTIQ+DF LP RF   YV S +EK  P++IHR +FGSIERFIGI+IE+F
Sbjct: 469 LEDSIGRTWQCGTIQLDFQLPQRFELEYVGSDNEKHRPIVIHRVIFGSIERFIGILIEHF 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P+Q  V  I+     Y  E+      + + +E D RNE I YKIRE   ++
Sbjct: 529 AGKFPTWLAPVQVKVLPISDKFNNYCDEVVKQFNENGIRVEIDQRNEKIGYKIREARNER 588

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P I+I G+KE  E +I +R   +     +++ D I  +  E
Sbjct: 589 VPYIVIIGEKEEGEGNISLRSRKNGDEGSINVKDLIERINNE 630


>gi|227885859|ref|ZP_04003664.1| threonine--tRNA ligase [Escherichia coli 83972]
 gi|300898493|ref|ZP_07116830.1| threonyl-tRNA synthetase [Escherichia coli MS 198-1]
 gi|300917719|ref|ZP_07134368.1| threonyl-tRNA synthetase [Escherichia coli MS 115-1]
 gi|300930805|ref|ZP_07146177.1| threonyl-tRNA synthetase [Escherichia coli MS 187-1]
 gi|300951319|ref|ZP_07165163.1| threonyl-tRNA synthetase [Escherichia coli MS 116-1]
 gi|300958608|ref|ZP_07170733.1| threonyl-tRNA synthetase [Escherichia coli MS 175-1]
 gi|301050944|ref|ZP_07197793.1| threonyl-tRNA synthetase [Escherichia coli MS 185-1]
 gi|301647910|ref|ZP_07247687.1| threonyl-tRNA synthetase [Escherichia coli MS 146-1]
 gi|227837432|gb|EEJ47898.1| threonine--tRNA ligase [Escherichia coli 83972]
 gi|300297398|gb|EFJ53783.1| threonyl-tRNA synthetase [Escherichia coli MS 185-1]
 gi|300314733|gb|EFJ64517.1| threonyl-tRNA synthetase [Escherichia coli MS 175-1]
 gi|300357845|gb|EFJ73715.1| threonyl-tRNA synthetase [Escherichia coli MS 198-1]
 gi|300415120|gb|EFJ98430.1| threonyl-tRNA synthetase [Escherichia coli MS 115-1]
 gi|300449416|gb|EFK13036.1| threonyl-tRNA synthetase [Escherichia coli MS 116-1]
 gi|300461363|gb|EFK24856.1| threonyl-tRNA synthetase [Escherichia coli MS 187-1]
 gi|301073967|gb|EFK88773.1| threonyl-tRNA synthetase [Escherichia coli MS 146-1]
 gi|312946320|gb|ADR27147.1| threonyl-tRNA synthetase [Escherichia coli O83:H1 str. NRG 857C]
 gi|313649261|gb|EFS13695.1| threonyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|315618916|gb|EFU99499.1| threonyl-tRNA synthetase [Escherichia coli 3431]
 gi|323169354|gb|EFZ55030.1| threonyl-tRNA synthetase [Shigella sonnei 53G]
 gi|323186901|gb|EFZ72219.1| threonyl-tRNA synthetase [Escherichia coli RN587/1]
 gi|324007092|gb|EGB76311.1| threonyl-tRNA synthetase [Escherichia coli MS 57-2]
 gi|332090644|gb|EGI95739.1| threonyl-tRNA synthetase [Shigella boydii 5216-82]
 gi|332093917|gb|EGI98970.1| threonyl-tRNA synthetase [Shigella dysenteriae 155-74]
 gi|332759227|gb|EGJ89536.1| threonyl-tRNA synthetase [Shigella flexneri K-671]
 gi|332762542|gb|EGJ92807.1| threonyl-tRNA synthetase [Shigella flexneri 4343-70]
 gi|332767218|gb|EGJ97413.1| threonyl-tRNA synthetase [Shigella flexneri 2930-71]
 gi|333018198|gb|EGK37500.1| threonyl-tRNA synthetase [Shigella flexneri K-304]
          Length = 622

 Score =  652 bits (1682), Expect = 0.0,   Method: Composition-based stats.
 Identities = 294/632 (46%), Positives = 421/632 (66%), Gaps = 16/632 (2%)

Query: 24  SDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMA 82
            DVA  I   LAK  +A  +NG++ D  D +  +  + IIT +D   L +IRHSCAH++ 
Sbjct: 1   MDVALDIGPGLAKACIAGRVNGELVDACDLIENDAQLSIITAKDEEGLEIIRHSCAHLLG 60

Query: 83  EAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLS 142
            A++ +WP  ++AIGP+I++GFYYD D ++  + +++  +EK+M E+  ++   +K+ +S
Sbjct: 61  HAIKQLWPHTKMAIGPVIDNGFYYDVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVS 120

Query: 143 HEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLM 201
             +ARE F ++ E+YKV IL E+I   +   LY   E+ D+CRGPHV +      F KLM
Sbjct: 121 WHEARETFANRGESYKVSILDENIAHDDKPGLYFHEEYVDMCRGPHVPNMRFCHHF-KLM 179

Query: 202 KVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED 261
           K AGAYWRGDSN  ML RIYGTAW  ++ L  YL  LEE+ KRDHRK+ +++DL+H+ E+
Sbjct: 180 KTAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEE 239

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
             G++FWH  GW IF+ L  ++R K+K+  Y+E+  P ++D+ LW+++GHWD+Y+  MF 
Sbjct: 240 APGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFT 299

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
                 T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+AEFGS +RNEPSGSLHGL
Sbjct: 300 ------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGL 353

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           MRVRGFTQDDAH+FCT+EQ+ +E      L+  +Y  FGFEKI+VKLSTRPEKR+GSD +
Sbjct: 354 MRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEKIVVKLSTRPEKRIGSDEM 413

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDF 500
           WD AE  +   L+      ++ I     LGEGAFYGPK E+ L D + R WQCGT+Q+DF
Sbjct: 414 WDRAEADLAVALE------ENNIPFEYQLGEGAFYGPKIEFTLYDCLDRAWQCGTVQLDF 467

Query: 501 NLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTI 560
           +LPSR +A YV   +E+  PVMIHRA+ GS+ERFIGI+ E F G  P WL+P+Q ++  I
Sbjct: 468 SLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVIMNI 527

Query: 561 TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
           T S  EY  E+   L +  + ++ D RNE I +KIREH+++++P +++CGDKE     + 
Sbjct: 528 TDSQSEYVNELTQKLSNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVA 587

Query: 621 IRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           +R         + + + I  L +E      ++
Sbjct: 588 VRTRRGKDLGSMDVNEVIEKLQQEIRSRSLKQ 619


>gi|329928815|ref|ZP_08282654.1| threonine--tRNA ligase [Paenibacillus sp. HGF5]
 gi|328937458|gb|EGG33879.1| threonine--tRNA ligase [Paenibacillus sp. HGF5]
          Length = 645

 Score =  652 bits (1682), Expect = 0.0,   Method: Composition-based stats.
 Identities = 259/649 (39%), Positives = 407/649 (62%), Gaps = 21/649 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           I +  PDGS++ +   +   DVA SIS  L K AVA  ++G V DLS P+++G+ IEI+T
Sbjct: 3   ISIKLPDGSVREYEAGSNIEDVAASISSGLRKNAVAGKMDGIVVDLSTPLQDGALIEIVT 62

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWP--EVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
            + P  L V+RHS AH++A+A + ++   EV++ +GP+IEDGFYYD D E+P + ++L +
Sbjct: 63  QDTPEGLEVMRHSTAHLLAQATKRLYGQKEVKLGVGPVIEDGFYYDMDLEEPLNPEDLQK 122

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK+M+ II  + P +++ +S  +A  +F    + YK+E++ ++P    +T+Y QGE+FD
Sbjct: 123 IEKEMERIIGENLPIVRKEVSRAEALRIFGELGDPYKLELINALPEDSIITIYEQGEFFD 182

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG++K F KLM VAGAYWRGDS   ML R+YGTA+  + +L ++L  LEE+
Sbjct: 183 LCRGPHVPSTGKIKVF-KLMNVAGAYWRGDSKNKMLQRVYGTAFVKKAQLDEHLRLLEEA 241

Query: 242 EKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQV 299
           +KRDHRKL +E+ +F  ++  G G+  W   G K+ +TL  Y+    +   Y+ + TP +
Sbjct: 242 KKRDHRKLGKELQMFTFSQLVGQGLPIWLPNGAKLRRTLERYIVDMEERLGYQHVYTPVL 301

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +  L++ SGHW+ Y+ +MF     D+         L+PMNCP H+ V+   + SYR+LP
Sbjct: 302 GNVELYKTSGHWEHYQEDMFPKMEMDN-----EELVLRPMNCPHHMMVYKSDMHSYRDLP 356

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G  +R E SG+L GL RVR  T +D+H+FC  +Q+  E  ++  LI+++YKDFG
Sbjct: 357 IRIAELGMQHRYEMSGALTGLHRVRAMTLNDSHIFCRPDQIKEEFARVIQLIMTVYKDFG 416

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R  +       +D +W+ ++ +++ V++++     +        GE AFY
Sbjct: 417 IHDYRFRLSYRDPQDTEKYFQNDEMWEMSQRMLREVVESLDMPFYE------AEGEAAFY 470

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  ++ A+G++    T+Q+DF LP RF   YV    +K  PV+IHR + G++ERF 
Sbjct: 471 GPKLDVQIRTALGKEETLSTVQLDFLLPERFELEYVGDDGQKHRPVVIHRGILGTMERFT 530

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
             ++ENF G LPLWLSP+Q  V  ++++  +YA+E+A  L+   +S+E D RNE + YKI
Sbjct: 531 AFLLENFAGALPLWLSPVQVKVIPVSNAFEDYAKEVAEKLQFAGISVEPDLRNEKLGYKI 590

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           RE  ++KIP + I G+ E S  ++ +R+ G        L + I  L +E
Sbjct: 591 REAQLEKIPYMFIVGENEKSAGAVSVRKRGEGDIGAQPLDEIILKLREE 639


>gi|221311719|ref|ZP_03593566.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221316045|ref|ZP_03597850.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           NCIB 3610]
 gi|221320956|ref|ZP_03602250.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           JH642]
 gi|221325241|ref|ZP_03606535.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           SMY]
 gi|255767793|ref|NP_391636.2| threonyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|254763338|sp|P18256|SYT2_BACSU RecName: Full=Threonyl-tRNA synthetase 2; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|225185421|emb|CAB15783.2| threonyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
          Length = 638

 Score =  652 bits (1682), Expect = 0.0,   Method: Composition-based stats.
 Identities = 278/646 (43%), Positives = 418/646 (64%), Gaps = 16/646 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           M   + +  PDG I+ +P   T  + A SIS SL KKA A  +NGK+ DLS  +  +  +
Sbjct: 1   MSKHVHIQLPDGQIQEYPKGITIKEAAGSISSSLQKKAAAGQVNGKLVDLSFKLEEDAEL 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            I+T +    L V+RH+ AH++A+AV+ ++ EV + +GP+I DGFYYD    +  +S +L
Sbjct: 61  SIVTLDSQEGLQVLRHTTAHVLAQAVKRLYGEVSLGVGPVILDGFYYDMKLGKSLASGDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEK+M+ II  +    +  +S+E+A ELF  K E  K+EIL+ IP  E++TLY+QGE+
Sbjct: 121 EAIEKEMKNIINENLEIKRIEVSYEEAEELFAQKDERLKLEILKDIPRGEDITLYQQGEF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPH+ STG +K F KL +V+GAYWRGDS   +L R+YG A+  +++L  +L+ LE
Sbjct: 181 VDLCRGPHLPSTGMIKAF-KLTRVSGAYWRGDSKNEVLQRVYGVAFQKKKDLDAHLHMLE 239

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+ KRDHRKL +++ LF  +E+  G+ F+  KG  +   L  + R  +    Y+E+ TP 
Sbjct: 240 EAAKRDHRKLGKQLGLFMFSEEAPGMPFYLPKGQIVRNELERFSRELQTNAGYDEVRTPF 299

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +++Q LW+QSGHWD YR NM+  +       D   FA+KPMNCPGH+ +F + L SYR+L
Sbjct: 300 MMNQRLWEQSGHWDHYRDNMYFSEV------DDTRFAMKPMNCPGHMLIFKNSLYSYRDL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG V+R+E SG+L+G++RVR F QDDAH+F  ++Q+ +E  +   LI  +Y+ F
Sbjct: 354 PIRMAEFGQVHRHEYSGALNGMLRVRTFCQDDAHIFVREDQIESEIKEAIRLIDEVYRTF 413

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE   V+LSTRPE  +G D+LW+ +E  +  VL+ +       ++  +  G+GAFYGPK
Sbjct: 414 GFEYS-VELSTRPEDSLGDDSLWEASERALARVLEELG------LSYEINEGDGAFYGPK 466

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++ +KDA+ R  QC TIQ+DF +P +F+  Y+N  +EK  PV+IHRAVFGSI+RF GI+
Sbjct: 467 IDFHIKDALKRSHQCATIQLDFQMPEKFDLTYINELNEKVRPVVIHRAVFGSIDRFFGIL 526

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE++ G  P+WL+PIQ  +  ++   ++Y +++   LK   +    D RNE + YKIRE 
Sbjct: 527 IEHYGGAFPVWLAPIQVQIIPVSHVHLDYCRKVQAELKQAGIRAGIDERNEKLGYKIRES 586

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            ++KIP +++ GD E  E ++ +RRFG    + V        L K+
Sbjct: 587 QVQKIPYVLVLGDHEEQENAVNVRRFGHQQNEHVPFQTFKDKLVKQ 632


>gi|205374566|ref|ZP_03227362.1| threonyl-tRNA synthetase [Bacillus coahuilensis m4-4]
          Length = 643

 Score =  652 bits (1682), Expect = 0.0,   Method: Composition-based stats.
 Identities = 261/657 (39%), Positives = 409/657 (62%), Gaps = 24/657 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           M   IKLTFPDG++K FP   T  DVA SIS  L KK++A  +NG+  DL  P+  +G I
Sbjct: 1   MSEMIKLTFPDGAVKEFPKGTTTEDVAASISPGLKKKSIAGKLNGQGVDLRTPLMIDGDI 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE--VQVAIGPIIEDGFYYDFDKEQPFSSD 117
           EIIT     +L ++RHS AH+MA+A++ ++ +  V++ +GP+IE GFYYD D E   + +
Sbjct: 61  EIITAGSEDALEILRHSTAHLMAQAIKRLYGDESVKLGVGPVIEGGFYYDVDSEHKITPE 120

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +L  IEK+M++I+  +   ++  +S ++A+       + YKVE+L++IPA E V++Y QG
Sbjct: 121 DLPAIEKEMKKIVNENLDIVRSEVSRDEAKAR--FAGDEYKVELLDAIPADEAVSIYEQG 178

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           E+FDLCRG HV STG++K+F KL+ +AGAYWRG+S+  ML RIYGTA+ T+ EL + L  
Sbjct: 179 EFFDLCRGIHVPSTGKIKEF-KLLSIAGAYWRGNSDNKMLQRIYGTAFFTKDELKEQLRL 237

Query: 238 LEESEKRDHRKLAREMDLFH-IAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEIN 295
           LEE+++RDHRK+ +E+DLF    + G G+  W  KG  + + +  Y+  ++ K  Y+ + 
Sbjct: 238 LEEAKERDHRKIGKELDLFMNSQKVGQGLPLWLPKGATVRRMIERYIVDKEEKLGYDHVY 297

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP +    L++ SGHWD Y+ NMF V   D+         L+PMNCP H+ ++ +G+ SY
Sbjct: 298 TPVLGSVDLYKTSGHWDHYQENMFPVMEMDN-----EELVLRPMNCPHHMMIYKNGIHSY 352

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+  E  ++  L++ +Y
Sbjct: 353 RELPIRIAELGTMHRYEMSGALAGLQRVRGMTLNDAHIFVRPDQIKEEFKRVVRLVMEVY 412

Query: 416 KDFGFEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
           KDF  +    +LS R      K    D +W+ A++++K  +D +       ++     GE
Sbjct: 413 KDFDLKDYSFRLSYRDPEDTEKYFDDDQMWERAQSMLKEAMDEL------DVHYFEADGE 466

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
            AFYGPK +  +K A+G++    T+Q+DF LP RF+  YV    ++  PV+IHR V  ++
Sbjct: 467 AAFYGPKLDVQVKTALGKEETLSTVQLDFLLPERFDLTYVGEDGKQHRPVVIHRGVVSTM 526

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNET 590
           ERF+  +IE +KG  P WL+P+Q  V  ++     +YA+++   L+S  +  + D R+E 
Sbjct: 527 ERFVAFLIEEYKGAFPTWLAPVQVQVIPVSPDVHFDYAKKVQEELRSAGIRADLDSRDEK 586

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLP 647
           I YKIRE  ++KIP +++ GD E  E ++ +R++G   ++ +        L KE   
Sbjct: 587 IGYKIREAQMQKIPYMLVVGDNEIEEEAVNVRKYGEQKSETLPFAQFFTALKKEVTK 643


>gi|322372498|ref|ZP_08047034.1| threonine--tRNA ligase [Streptococcus sp. C150]
 gi|321277540|gb|EFX54609.1| threonine--tRNA ligase [Streptococcus sp. C150]
          Length = 648

 Score =  652 bits (1682), Expect = 0.0,   Method: Composition-based stats.
 Identities = 264/661 (39%), Positives = 410/661 (62%), Gaps = 26/661 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +TFPDG+++ F    T  D+A+SIS SLAKKA+A   NGK+ D +  +  +GSIEI+
Sbjct: 1   MINITFPDGAVREFESGVTTFDIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGSIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQ 121
           TP+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D +    S+++L +
Sbjct: 61  TPDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNQAGQISNEDLPR 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWF 180
           IE++M++I+  + P +++ ++ ++ARE+F+   + YK+E++E     E  +T+YRQGE+ 
Sbjct: 121 IEEEMKKIVKENFPSIREEVTKDEAREIFK--NDPYKLELIEEHSEDEGGLTIYRQGEYV 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ RIYGTAW  +++L  YL  LEE
Sbjct: 179 DLCRGPHVPSTGRIQIFHLL-NVAGAYWRGNSDNAMMQRIYGTAWFDKKDLKTYLKRLEE 237

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           +++RDHRKL +E+DLF I+++   G+ FW   G  I + L  Y+  +++   Y+ + TP 
Sbjct: 238 AKERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVDKEVAAGYQHVYTPP 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L++ SGHWD YR +MF          D   F L+PMNCP H+ V+ H + SYREL
Sbjct: 298 IASVELYKTSGHWDHYREDMFPPMDMG----DGEEFVLRPMNCPHHIEVYKHHVHSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  + +D H F   EQ+ +E  KI  LII +Y+DF
Sbjct: 354 PIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHTFVAPEQIEDEFKKILQLIIDVYEDF 413

Query: 419 GFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
                  +LS R      K   +D +W++A+ ++K  +D +       +      GE AF
Sbjct: 414 NLTDYRFRLSYRDPADKHKYFDNDEMWENAQRMLKAAVDDMG------VEYYEAEGEAAF 467

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K A+G++    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF
Sbjct: 468 YGPKLDIQVKTALGKEETLSTIQLDFLLPERFDLHYIGADGEEHRPVMIHRGVISTMERF 527

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
             I+IEN+KG  P WL+P Q  +  ++    V+YA ++A  L+   +  E D RNE + +
Sbjct: 528 TAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWKVAKKLRDRGVRAEVDERNEKMQF 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE---SLPPDC 650
           KIR    +KIP  +I GDKE  + ++ +RR+G   T   ++ + +  +  +      PD 
Sbjct: 588 KIRASQTQKIPYQLIVGDKEMEDGTVNVRRYGQKQTHTETVSEFVENILADIARKSRPDA 647

Query: 651 Q 651
           +
Sbjct: 648 E 648


>gi|15459130|gb|AAL00276.1| Threonyl-tRNA synthetase 1 [Streptococcus pneumoniae R6]
          Length = 660

 Score =  652 bits (1682), Expect = 0.0,   Method: Composition-based stats.
 Identities = 262/651 (40%), Positives = 405/651 (62%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  +  +GSIEI+
Sbjct: 14  MINITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGSIEIV 73

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQ 121
           TP+   +L ++RHS  H+ A+A + ++P++ + +GP IEDGFYYD D      S+++L +
Sbjct: 74  TPDHEDALPILRHSATHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDHTAGQISNEDLPR 133

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWF 180
           IE++MQ+I+  + P +++ ++ ++ARE+F+   + YK+E++E     E  +T+YRQGE+ 
Sbjct: 134 IEEEMQKIVKENFPSIREEVTKDEAREIFK--NDPYKLELIEEHSEDEGGLTIYRQGEYV 191

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ RIYGTAW  +++L  YL   EE
Sbjct: 192 DLCRGPHVPSTGRIQIFHLLH-VAGAYWRGNSDNAMMQRIYGTAWFDKKDLKNYLQMREE 250

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           +++RDHRKL +E+DLF I+++   G+ FW   G  I + L  Y+  +++   Y+ + TP 
Sbjct: 251 AKERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVNKELVSGYQHVYTPP 310

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L++ SGHWD Y+ +MF          D   F L+PMNCP H+ VF H + SYREL
Sbjct: 311 LASVELYKTSGHWDHYQEDMFPTMDMG----DGEEFVLRPMNCPHHIQVFKHHVHSYREL 366

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y+DF
Sbjct: 367 PIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYEDF 426

Query: 419 GFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
                  +LS R      K   +D +W++A+ +++  LD +       ++     GE AF
Sbjct: 427 NLTDYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAF 480

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K A+G++    TIQ+DF LP RF+  Y+ +  E   PVMIHR V  ++ERF
Sbjct: 481 YGPKLDIQIKTALGKEETLSTIQLDFLLPERFDLKYIGADGEDHRPVMIHRGVISTMERF 540

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
             I+IEN+KG  P WL+P Q  +  ++    V+YA E+A  L+   +  + D RNE + +
Sbjct: 541 TAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAKKLRDRGVRADVDERNEKMQF 600

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR     KIP  +I GDKE  + ++ +RR+G   TQ VS+ + +  +  +
Sbjct: 601 KIRASQTSKIPYQLIVGDKEMEDETVNVRRYGQKETQTVSVDNFVQAILAD 651


>gi|301327449|ref|ZP_07220684.1| threonyl-tRNA synthetase [Escherichia coli MS 78-1]
 gi|309793489|ref|ZP_07687916.1| threonyl-tRNA synthetase [Escherichia coli MS 145-7]
 gi|312969746|ref|ZP_07783929.1| threonyl-tRNA synthetase [Escherichia coli 1827-70]
 gi|300845961|gb|EFK73721.1| threonyl-tRNA synthetase [Escherichia coli MS 78-1]
 gi|308123076|gb|EFO60338.1| threonyl-tRNA synthetase [Escherichia coli MS 145-7]
 gi|310338031|gb|EFQ03120.1| threonyl-tRNA synthetase [Escherichia coli 1827-70]
          Length = 622

 Score =  652 bits (1682), Expect = 0.0,   Method: Composition-based stats.
 Identities = 293/632 (46%), Positives = 421/632 (66%), Gaps = 16/632 (2%)

Query: 24  SDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMA 82
            DVA  I   LAK  +A  +NG++ D  D +  +  + IIT +D   L +IRHSCAH++ 
Sbjct: 1   MDVALDIGPGLAKACIAGRVNGELVDACDLIENDAQLSIITAKDEDGLEIIRHSCAHLLG 60

Query: 83  EAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLS 142
            A++ +WP  ++AIGP+I++GFYYD D ++  + +++  +EK+M E+  ++   +K+ +S
Sbjct: 61  HAIKQLWPHTKMAIGPVIDNGFYYDVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVS 120

Query: 143 HEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLM 201
             +ARE F ++ E+YKV IL E+I   +   LY   E+ D+CRGPHV +      F KLM
Sbjct: 121 WHEARETFANRGESYKVSILDENIAHDDKPGLYFHEEYVDMCRGPHVPNMRFCHHF-KLM 179

Query: 202 KVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED 261
           K AGAYWRGDSN  ML RIYGTAW  ++ L  YL  LEE+ KRDHRK+ +++DL+H+ E+
Sbjct: 180 KTAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEE 239

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
             G++FWH  GW IF+ L  ++R K+K+  Y+E+  P ++D+ LW+++GHWD+Y+  MF 
Sbjct: 240 APGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFT 299

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
                 T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+AEFGS +RNEPSGSLHGL
Sbjct: 300 ------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGL 353

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           MRVRGFTQDDAH+FCT+EQ+ +E      L+  +Y  FGFEKI+VKLSTRPEKR+GSD +
Sbjct: 354 MRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEKIVVKLSTRPEKRIGSDEM 413

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDF 500
           WD AE  +   L+      ++ I     LGEGAFYGPK E+ L D + R WQCGT+Q+DF
Sbjct: 414 WDRAEADLAVALE------ENNIPFEYQLGEGAFYGPKIEFTLYDCLDRAWQCGTVQLDF 467

Query: 501 NLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTI 560
           +LPSR +A YV   +E+  PVMIHRA+ GS+ERFIGI+ E F G  P WL+P+Q ++  I
Sbjct: 468 SLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVIMNI 527

Query: 561 TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
           T S  +Y  E+   L +  + ++ D RNE I +KIREH+++++P +++CGDKE     + 
Sbjct: 528 TDSQSDYVNELTQKLSNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVA 587

Query: 621 IRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           +R         + + + I  L +E      ++
Sbjct: 588 VRTRRGKDLGSMDVNEVIEKLQQEIRSRSLKQ 619


>gi|73662391|ref|YP_301172.1| threonyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|123761534|sp|Q49YB4|SYT_STAS1 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|72494906|dbj|BAE18227.1| threonyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 645

 Score =  652 bits (1682), Expect = 0.0,   Method: Composition-based stats.
 Identities = 261/650 (40%), Positives = 398/650 (61%), Gaps = 21/650 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
             IK+ FPDG+ K F    T  D+A+SIS  L KKAVA  +NG++ DL+ P+  +G IEI
Sbjct: 2   DQIKIKFPDGNTKEFDKGTTTEDIAQSISPGLRKKAVAGKLNGQLIDLTRPIESDGDIEI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +TP    +L V+RHS AH+MA+A++ ++ EV   +GP+IE GFYYDFD E+  SSD+  +
Sbjct: 62  VTPGSDEALEVLRHSTAHLMAQALKRLYGEVHFGVGPVIEGGFYYDFDMEESISSDDFEK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK M++I   + P  ++ +S  +A+       + YK E++++IP  ENVTLY QGE+ D
Sbjct: 122 IEKTMKQIANENYPIERKVVSRNEAKAF--FSDDPYKQELIDAIPEDENVTLYTQGEFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG HV ST ++K+F KL+  AGAYWRGDSN  ML RIYGTA+  +++L  +L  LEE 
Sbjct: 180 LCRGVHVPSTSKIKEF-KLLSTAGAYWRGDSNNKMLQRIYGTAFFDKKDLKAHLQMLEER 238

Query: 242 EKRDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRK+ +E++LF +    G+G+  W   G  I + +  Y+  +++   Y+ + TP +
Sbjct: 239 KERDHRKIGKELELFSNNPLVGAGLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVM 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +  L++ SGHWD Y+ +MF     D    +     L+PMNCP H+ ++ +   SYRELP
Sbjct: 299 ANVDLYKTSGHWDHYQEDMFPTMKLD----EYEEMVLRPMNCPHHMMIYANKPHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G+++R E SG++ GL RVRG T +DAH+F   +Q+  E  ++ NLII +Y DF 
Sbjct: 355 IRIAELGTMHRYEASGAVSGLQRVRGMTLNDAHIFVRPDQIKEEFKRVVNLIIDVYNDFN 414

Query: 420 FEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           FE    +LS R      K    D +W  AE+++K  +D +       ++    +GE AFY
Sbjct: 415 FENYSFRLSYRDPEDKEKYFDDDEMWIKAESMLKEAVDELG------LDYEEAIGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  ++ A+G++    T Q+DF LP +F   Y+ +  E+  PV+IHR V  ++ERF+
Sbjct: 469 GPKLDVQVQTAMGKEETLSTAQLDFLLPQKFELTYIGNDGEQHRPVVIHRGVVSTMERFV 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             + E  KG  P WL+P Q  +  +      +YA+ I + LKS  + +E D RNE + YK
Sbjct: 529 AFLTEETKGAFPTWLAPKQVEIIPVNVDLHYDYARLIQDELKSQGVRVEIDDRNEKMGYK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IRE  ++KIP  ++ GDKE   + + +R++GS   + +   + I  L  E
Sbjct: 589 IREAQMQKIPYQLVVGDKEVENKEVNVRKYGSQDQETLEKDEFIWNLVDE 638


>gi|312863291|ref|ZP_07723529.1| threonine--tRNA ligase [Streptococcus vestibularis F0396]
 gi|311100827|gb|EFQ59032.1| threonine--tRNA ligase [Streptococcus vestibularis F0396]
          Length = 648

 Score =  652 bits (1681), Expect = 0.0,   Method: Composition-based stats.
 Identities = 265/661 (40%), Positives = 410/661 (62%), Gaps = 26/661 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  +  +GSIEI+
Sbjct: 1   MINITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRTITEDGSIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQ 121
           TP+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D E    S+++L +
Sbjct: 61  TPDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNEAGQISNEDLPR 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWF 180
           IE++M++I+  + P +++ ++ ++ARE+F+   + YK+E++E     E  +T+YRQGE+ 
Sbjct: 121 IEEEMKKIVKENFPSIREEVTKDEAREIFK--NDPYKLELIEEHSEDEGGLTIYRQGEYV 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ RIYGTAW  +++L  YL  LEE
Sbjct: 179 DLCRGPHVPSTGRIQVFHLL-NVAGAYWRGNSDNAMMQRIYGTAWFDKKDLKAYLKRLEE 237

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           +++RDHRKL +E+DLF I+++   G+ FW   G  I + L  Y+  +++   Y+ + TP 
Sbjct: 238 AKERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVDKEVAAGYQHVYTPP 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L++ SGHWD YR +MF          D   F L+PMNCP H+ V+ H + SYREL
Sbjct: 298 IASVELYKTSGHWDHYREDMFPPMDMG----DGEEFVLRPMNCPHHIEVYKHHVHSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  + +D H F   EQ+ +E  KI  LII +Y+DF
Sbjct: 354 PIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHTFVAPEQIEDEFKKILQLIIDVYEDF 413

Query: 419 GFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
                  +LS R      K   +D +W++A+ ++K  +D +       +      GE AF
Sbjct: 414 NLTDYRFRLSYRDPADKHKYFDNDEMWENAQRMLKAAVDDMG------VEYYEAEGEAAF 467

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K A+G++    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF
Sbjct: 468 YGPKLDIQVKTALGKEETLSTIQLDFLLPERFDLHYIGADGEEHRPVMIHRGVISTMERF 527

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
             I+IEN+KG  P WL+P Q  +  ++    V+YA E+A  L+   +  E D RNE + +
Sbjct: 528 TAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAKELRDRGVRAEVDERNEKMQF 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE---SLPPDC 650
           KIR    +KIP  +I GDKE  + ++ +RR+G   T   ++ + +  +  +      PD 
Sbjct: 588 KIRASQTQKIPYQLIVGDKEMEDGTVNVRRYGQKQTHTETVSEFVENILADIARKSRPDA 647

Query: 651 Q 651
           +
Sbjct: 648 E 648


>gi|89256700|ref|YP_514062.1| threonyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           LVS]
 gi|156502860|ref|YP_001428925.1| threonyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FTNF002-00]
 gi|167010452|ref|ZP_02275383.1| threonyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FSC200]
 gi|254368007|ref|ZP_04984027.1| threonyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           257]
 gi|290954131|ref|ZP_06558752.1| threonyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           URFT1]
 gi|295312449|ref|ZP_06803221.1| threonyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           URFT1]
 gi|122999730|sp|Q2A2J0|SYT_FRATH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|166223341|sp|A7NDB6|SYT_FRATF RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|89144531|emb|CAJ79846.1| Threonyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           LVS]
 gi|134253817|gb|EBA52911.1| threonyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           257]
 gi|156253463|gb|ABU61969.1| threonyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FTNF002-00]
          Length = 634

 Score =  652 bits (1681), Expect = 0.0,   Method: Composition-based stats.
 Identities = 298/643 (46%), Positives = 424/643 (65%), Gaps = 16/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            I + FPDGSI+ F       DVA+SIS SLAK  +A  I+ ++ D  D +     + +I
Sbjct: 1   MINIRFPDGSIREFEAGVNSLDVAKSISPSLAKATMAAYIDDQLKDAKDAINSNCELRLI 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +DP  L ++RHSCAH++A AV+ ++P  +V IGP++++GFYYDF  ++     +L  I
Sbjct: 61  TVKDPEGLEILRHSCAHLLAHAVKELYPNTEVTIGPVVDNGFYYDFSFKESIGEADLPTI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EKKM+E+  + +P   + +   +A E F+++ E YKVEI++SI A E + +Y Q  + DL
Sbjct: 121 EKKMKELAKKSAPVSYRVVPKAEAIEFFKAQGENYKVEIIDSI-ADEQMKIYTQDNFSDL 179

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ +T  +K F KL K+AGAYWRG+S+  ML+RIYGT W T+++L QYL  LEE+E
Sbjct: 180 CRGPHIPNTSVLKAF-KLTKLAGAYWRGNSDNEMLTRIYGTCWATKEDLEQYLNMLEEAE 238

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KRDHRK+ + +DLFH  ED  G+ FWH  G +I++ +  YMR    K    EI TP + D
Sbjct: 239 KRDHRKIGKVLDLFHFQEDSPGIAFWHDNGVRIWRQVEDYMRASNNKYGCSEIRTPLIAD 298

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             LWQ+SGH   Y  NMFA K       + R FA++PMNCP  V V+N  L SYR+LP+R
Sbjct: 299 FSLWQKSGHASKYAENMFATK------SENRDFAIRPMNCPTCVQVYNTKLHSYRDLPIR 352

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AEFG V+RNEPSGSLHGL+RVR FTQDD H+FCT EQ+  E + +      +YKDFGF 
Sbjct: 353 MAEFGIVHRNEPSGSLHGLLRVRSFTQDDGHIFCTPEQVEEEVILMVQQCFEVYKDFGFN 412

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              VK++ RPE R+G D  WD +E I+K  LD       + ++  +  GEGAFYGPK E+
Sbjct: 413 DFAVKIALRPENRIGDDETWDKSEQILKNALDA------NNVSYELFPGEGAFYGPKIEF 466

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            LKDAIGR WQCGTIQ+DF++P R  A Y++ + EK   VM+HRA+ GS+ERFIG++IE+
Sbjct: 467 HLKDAIGRSWQCGTIQLDFSMPQRLGATYIDKNGEKQVSVMLHRAIVGSLERFIGMLIEH 526

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + GNLPLWL+P+Q  V  I+++  +Y +E+  +L+ + +  + D RNE I +KIREH++ 
Sbjct: 527 YAGNLPLWLAPVQVAVMGISNNQDDYCKEVFIMLEKNGIRAKLDLRNEKIGFKIREHTLL 586

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           ++P ++I G  E  ++ I IR+       ++S+ D    L K+
Sbjct: 587 RVPYLVILGKNEQEQKIITIRKHSGEDLGQMSVDDFCAFLDKQ 629


>gi|300818358|ref|ZP_07098568.1| threonyl-tRNA synthetase [Escherichia coli MS 107-1]
 gi|300821407|ref|ZP_07101554.1| threonyl-tRNA synthetase [Escherichia coli MS 119-7]
 gi|300525910|gb|EFK46979.1| threonyl-tRNA synthetase [Escherichia coli MS 119-7]
 gi|300528998|gb|EFK50060.1| threonyl-tRNA synthetase [Escherichia coli MS 107-1]
 gi|323158484|gb|EFZ44500.1| threonyl-tRNA synthetase [Escherichia coli E128010]
 gi|323175213|gb|EFZ60827.1| threonyl-tRNA synthetase [Escherichia coli LT-68]
 gi|323180497|gb|EFZ66042.1| threonyl-tRNA synthetase [Escherichia coli 1180]
 gi|323186265|gb|EFZ71617.1| threonyl-tRNA synthetase [Escherichia coli 1357]
          Length = 622

 Score =  652 bits (1681), Expect = 0.0,   Method: Composition-based stats.
 Identities = 294/632 (46%), Positives = 421/632 (66%), Gaps = 16/632 (2%)

Query: 24  SDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMA 82
            DVA  I   LAK  +A  +NG++ D  D +  +  + IIT +D   L +IRHSCAH++ 
Sbjct: 1   MDVALDIGPGLAKACIAGRVNGELVDACDLIENDAQLSIITAKDEDGLEIIRHSCAHLLG 60

Query: 83  EAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLS 142
            A++ +WP  ++AIGP+I++GFYYD D ++  + +++  +EK+M E+  ++   +K+ +S
Sbjct: 61  HAIKQLWPHTKMAIGPVIDNGFYYDVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVS 120

Query: 143 HEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLM 201
             +ARE F ++ E+YKV IL E+I   +   LY   E+ D+CRGPHV +      F KLM
Sbjct: 121 WHEARETFANRGESYKVSILDENIAHDDKPGLYFHEEYVDMCRGPHVPNMRFCHHF-KLM 179

Query: 202 KVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED 261
           K AGAYWRGDSN  ML RIYGTAW  ++ L  YL  LEE+ KRDHRK+ +++DL+H+ E+
Sbjct: 180 KTAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEE 239

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
             G++FWH  GW IF+ L  ++R K+K+  Y+E+  P ++D+ LW+++GHWD+Y+  MF 
Sbjct: 240 APGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFT 299

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
                 T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+AEFGS +RNEPSGSLHGL
Sbjct: 300 ------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGL 353

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           MRVRGFTQDDAH+FCT+EQ+ +E      L+  +Y  FGFEKI+VKLSTRPEKR+GSD +
Sbjct: 354 MRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEKIVVKLSTRPEKRIGSDEM 413

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDF 500
           WD AE  +   L+      ++ I     LGEGAFYGPK E+ L D + R WQCGT+Q+DF
Sbjct: 414 WDRAEADLAVALE------ENNIPFEYQLGEGAFYGPKIEFTLYDCLDRAWQCGTVQLDF 467

Query: 501 NLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTI 560
           +LPSR +A YV   +E+  PVMIHRA+ GS+ERFIGI+ E F G  P WL+P+Q ++  I
Sbjct: 468 SLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVIMNI 527

Query: 561 TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
           T S  EY  E+   L +  + ++ D RNE I +KIREH+++++P +++CGDKE     + 
Sbjct: 528 TDSQSEYVNELTQKLSNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVA 587

Query: 621 IRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           +R         + + + I  L +E      ++
Sbjct: 588 VRTRRGKDLGSMDVNEVIEKLQQEIRSRSLKQ 619


>gi|161503559|ref|YP_001570671.1| threonyl-tRNA synthetase [Salmonella enterica subsp. arizonae
           serovar 62:z4,z23:-- str. RSK2980]
 gi|160864906|gb|ABX21529.1| hypothetical protein SARI_01637 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 622

 Score =  652 bits (1681), Expect = 0.0,   Method: Composition-based stats.
 Identities = 294/632 (46%), Positives = 421/632 (66%), Gaps = 16/632 (2%)

Query: 24  SDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMA 82
            DVA  I   LAK  +A  +NG++ D SD +  + ++ IIT +D   L +IRHSCAH++ 
Sbjct: 1   MDVALDIGPGLAKATIAGRVNGELVDASDLIENDATLSIITAKDEEGLEIIRHSCAHLLG 60

Query: 83  EAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLS 142
            A++ +WP  ++AIGP++++GFYYD D ++  + +++  +EK+M E+  +D   +K+ +S
Sbjct: 61  HAIKQLWPHTKMAIGPVVDNGFYYDVDLDRTLTQEDVEALEKRMHELAEKDYDVIKKKVS 120

Query: 143 HEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLM 201
              ARE F  + E YKV IL E+I   +   LY   E+ D+CRGPHV +      F KLM
Sbjct: 121 WHDARETFVKRGETYKVAILDENIAHDDKPGLYHHEEYVDMCRGPHVPNMRFCHHF-KLM 179

Query: 202 KVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED 261
           K AGAYWRGDSN  ML RIYGTAW  ++ L  YL  LEE+ KRDHRK+ +++DL+H+ E+
Sbjct: 180 KTAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEE 239

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
             G++FWH  GW IF+ L  ++R K+K+  Y+E+  P ++D+ LW+++GHWD+Y+  MF 
Sbjct: 240 APGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFT 299

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
                 T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+AEFGS +RNEPSG+LHGL
Sbjct: 300 ------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGL 353

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           MRVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  FGFEKI+VKLSTRP+KR+GSD +
Sbjct: 354 MRVRGFTQDDAHIFCTEEQIRDEVNACIRMVYDMYSTFGFEKIVVKLSTRPDKRIGSDEM 413

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDF 500
           WD AE  +   L+      ++ I     LGEGAFYGPK E+ L D + R WQCGT+Q+DF
Sbjct: 414 WDRAEADLAVALE------ENNIPFEYQLGEGAFYGPKIEFTLYDCLDRAWQCGTVQLDF 467

Query: 501 NLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTI 560
           +LPSR +A YV   +E+  PVMIHRA+ GS+ERFIGI+ E F G  P WL+P+Q +V  I
Sbjct: 468 SLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVVMNI 527

Query: 561 TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
           T S  EY  E+   L++  + ++ D RNE I +KIREH+++++P +++CGDKE     + 
Sbjct: 528 TDSQSEYVNELTQKLQNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVA 587

Query: 621 IRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           +R         + + + I  L +E      Q+
Sbjct: 588 VRTRRGKDLGSLDVNEVIEKLQQEIRSRSLQQ 619


>gi|257885297|ref|ZP_05664950.1| threonyl-tRNA synthetase [Enterococcus faecium 1,231,501]
 gi|257821149|gb|EEV48283.1| threonyl-tRNA synthetase [Enterococcus faecium 1,231,501]
          Length = 645

 Score =  652 bits (1681), Expect = 0.0,   Method: Composition-based stats.
 Identities = 263/651 (40%), Positives = 402/651 (61%), Gaps = 24/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEII 62
            IK+TFPDG++K F    T   +AESIS+SLAKKA+A  +NGK+ DL+ P+ E  SIEII
Sbjct: 1   MIKITFPDGAVKEFESGTTTLAIAESISKSLAKKALAGKVNGKLVDLTRPIEENASIEII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQ 121
           TP+   +L ++RHS AH+MA+A++ ++P +   +GP I+ GFYYD D  Q   ++++L  
Sbjct: 61  TPDHEDALGLVRHSAAHLMAQAMRRLYPNIHFGVGPAIDSGFYYDTDNGQNQVTAEDLPA 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE +M +I+  + P  ++ LS ++A E+     + YKVE++  +P  E +T Y+QGE+ D
Sbjct: 121 IEAEMMKIVKENLPIERRVLSKQEALEI--FASDPYKVELISELPE-EVITAYQQGEFID 177

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++ F KL+ VAGAYWRG+SN  M+ R+YGTA+  ++ L +Y+   EE+
Sbjct: 178 LCRGPHVPSTGRIQVF-KLLSVAGAYWRGNSNNQMMQRVYGTAFFDKKALKEYIRLREEA 236

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF ++ + GSG+ FW  KG  I +T+  Y+  +++   Y+ + TP +
Sbjct: 237 KERDHRKLGKELDLFMVSPEVGSGLPFWLPKGATIRRTIERYIVDKEVSLGYQHVYTPIM 296

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            D  L++ SGHWD Y+ +MF          D     L+PMNCP H+ V+ + + SYRELP
Sbjct: 297 GDVELYKTSGHWDHYQEDMFPPMDMG----DGEMLVLRPMNCPHHMMVYKNTIHSYRELP 352

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  +   L++++Y DF 
Sbjct: 353 IRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVAVYADFN 412

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R           DA+W+ A+ ++K  +D ++      ++     GE AFY
Sbjct: 413 ITDYRFRLSYRDPNNTDKYFDDDAMWEKAQAMLKAAMDELE------LDYFEAEGEAAFY 466

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK-CHPVMIHRAVFGSIERF 534
           GPK +  +K A+G +    TIQ+DF LP RF+  YV    E    PV+IHR +  ++ERF
Sbjct: 467 GPKLDVQVKTALGTEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTMERF 526

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           +  + E +KG  P WL+PIQA +  ++  +  +YA EI   L++  L +E D RNE + Y
Sbjct: 527 VAYLTEVYKGAFPTWLAPIQATIIPVSVDAHGDYAYEIKERLQTKGLRVEVDDRNEKMGY 586

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR    +KIP  ++ GDKE  + ++ +RR+GS  T    L   I  +  E
Sbjct: 587 KIRASQTQKIPYQLVVGDKELEDATVNVRRYGSKETAVEDLNIFIDAMEAE 637


>gi|261408878|ref|YP_003245119.1| threonyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
 gi|261285341|gb|ACX67312.1| threonyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
          Length = 645

 Score =  652 bits (1681), Expect = 0.0,   Method: Composition-based stats.
 Identities = 258/649 (39%), Positives = 406/649 (62%), Gaps = 21/649 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           I +  PDGS++ +   +   DVA SIS  L K AVA  ++G V DLS P+++G+ IEI+T
Sbjct: 3   ISIKLPDGSVREYEAGSNIEDVAASISSGLRKNAVAGKMDGIVVDLSTPLQDGALIEIVT 62

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWP--EVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
            + P  L V+RHS AH++A+A + ++   EV++ +GP+IEDGFYYD D E+P + ++L +
Sbjct: 63  QDTPEGLEVMRHSTAHLLAQATKRLYGQKEVKLGVGPVIEDGFYYDMDLEEPLNPEDLQK 122

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK+M+ II  + P +++ +S   A  +F    + YK+E++ ++P    +T+Y QGE+FD
Sbjct: 123 IEKEMERIIGENLPIVRKEVSRADALRIFGELGDPYKLELINALPEDSIITIYEQGEFFD 182

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG++K F KLM VAGAYWRGDS   ML R+YGTA+  + +L ++L  LEE+
Sbjct: 183 LCRGPHVPSTGKIKVF-KLMNVAGAYWRGDSKNKMLQRVYGTAFVKKAQLDEHLRLLEEA 241

Query: 242 EKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQV 299
           +KRDHRKL +E+ +F  ++  G G+  W   G K+ +TL  Y+    +   Y+ + TP +
Sbjct: 242 KKRDHRKLGKELQMFTFSQLVGQGLPIWLPNGAKLRRTLERYIVDMEERLGYQHVYTPVL 301

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +  L++ SGHW+ Y+ +MF     D+         L+PMNCP H+ V+   + SYR+LP
Sbjct: 302 GNVELYKTSGHWEHYQEDMFPKMEMDN-----EELVLRPMNCPHHMMVYKSDMHSYRDLP 356

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G  +R E SG+L GL RVR  T +D+H+FC  +Q+  E  ++  LI+++YKDFG
Sbjct: 357 IRIAELGMQHRYEMSGALTGLHRVRAMTLNDSHIFCRPDQIKEEFARVIQLIMTVYKDFG 416

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R  +       +D +W+ ++ +++ V++++     +        GE AFY
Sbjct: 417 IHDYRFRLSYRDPQDTEKYFQNDEMWEMSQRMLREVVESLDMPFYE------AEGEAAFY 470

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  ++ A+G++    T+Q+DF LP RF   YV    +K  PV+IHR + G++ERF 
Sbjct: 471 GPKLDVQIRTALGKEETLSTVQLDFLLPERFELEYVGDDGQKHRPVVIHRGILGTMERFT 530

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
             ++ENF G LPLWLSP+Q  V  ++++  +YA+E+A  L+   +S+E D RNE + YKI
Sbjct: 531 AFLLENFAGALPLWLSPVQVKVIPVSNAFEDYAKEVAEKLQFAGISVEPDLRNEKLGYKI 590

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           RE  ++KIP + I G+ E +  ++ +R+ G        L + I  L +E
Sbjct: 591 REAQLEKIPYMFIVGENEKNAGAVSVRKRGEGDIGAQPLDEIILKLREE 639


>gi|115315107|ref|YP_763830.1| threonine--tRNA ligase [Francisella tularensis subsp. holarctica
           OSU18]
 gi|122324891|sp|Q0BL41|SYT_FRATO RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|115130006|gb|ABI83193.1| threonine--tRNA ligase [Francisella tularensis subsp. holarctica
           OSU18]
          Length = 634

 Score =  651 bits (1680), Expect = 0.0,   Method: Composition-based stats.
 Identities = 298/643 (46%), Positives = 424/643 (65%), Gaps = 16/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            I + FPDGSI+ F       DVA+SIS SLAK  +A  I+ ++ D  D +     + +I
Sbjct: 1   MINIRFPDGSIREFEAGVNSLDVAKSISPSLAKATMAAYIDDQLKDAKDAINSNCELRLI 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +DP  L ++RHSCAH++A AV+ ++P  +V IGP++++GFYYDF  ++     +L  I
Sbjct: 61  TVKDPEGLEILRHSCAHLLAHAVKELYPNTEVTIGPVVDNGFYYDFSFKESIGEADLPTI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EKKM+E+  + +P   + +   +A E F+++ E YKVEI++SI A E + +Y Q  + DL
Sbjct: 121 EKKMKELAKKSAPVSYRVVPKTEAIEFFKAQGENYKVEIIDSI-ADEQMKIYTQDNFSDL 179

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ +T  +K F KL K+AGAYWRG+S+  ML+RIYGT W T+++L QYL  LEE+E
Sbjct: 180 CRGPHIPNTSVLKAF-KLTKLAGAYWRGNSDNEMLTRIYGTCWATKEDLEQYLNMLEEAE 238

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KRDHRK+ + +DLFH  ED  G+ FWH  G +I++ +  YMR    K    EI TP + D
Sbjct: 239 KRDHRKIGKVLDLFHFQEDSPGIAFWHDNGVRIWRQVEDYMRASNNKYGCSEIRTPLIAD 298

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             LWQ+SGH   Y  NMFA K       + R FA++PMNCP  V V+N  L SYR+LP+R
Sbjct: 299 FSLWQKSGHASKYAENMFATK------SENRDFAIRPMNCPTCVQVYNTKLHSYRDLPIR 352

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AEFG V+RNEPSGSLHGL+RVR FTQDD H+FCT EQ+  E + +      +YKDFGF 
Sbjct: 353 MAEFGIVHRNEPSGSLHGLLRVRSFTQDDGHIFCTPEQVEEEVILMVQQCFEVYKDFGFN 412

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              VK++ RPE R+G D  WD +E I+K  LD       + ++  +  GEGAFYGPK E+
Sbjct: 413 DFAVKIALRPENRIGDDETWDKSEQILKNALDA------NNVSYELFPGEGAFYGPKIEF 466

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            LKDAIGR WQCGTIQ+DF++P R  A Y++ + EK   VM+HRA+ GS+ERFIG++IE+
Sbjct: 467 HLKDAIGRSWQCGTIQLDFSMPQRLGATYIDKNGEKQVSVMLHRAIVGSLERFIGMLIEH 526

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + GNLPLWL+P+Q  V  I+++  +Y +E+  +L+ + +  + D RNE I +KIREH++ 
Sbjct: 527 YAGNLPLWLAPVQVAVMGISNNQDDYCKEVFIMLEKNGIRAKLDLRNEKIGFKIREHTLL 586

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           ++P ++I G  E  ++ I IR+       ++S+ D    L K+
Sbjct: 587 RVPYLVILGKNEQEQKIITIRKHSGEDLGQMSVDDFCAFLDKQ 629


>gi|312868227|ref|ZP_07728427.1| threonine--tRNA ligase [Streptococcus parasanguinis F0405]
 gi|311095972|gb|EFQ54216.1| threonine--tRNA ligase [Streptococcus parasanguinis F0405]
          Length = 647

 Score =  651 bits (1680), Expect = 0.0,   Method: Composition-based stats.
 Identities = 262/651 (40%), Positives = 409/651 (62%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  +  +GSIEI+
Sbjct: 1   MIKITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGSIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQ 121
           TP+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D +    S+++L +
Sbjct: 61  TPDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNQAGQISNEDLPR 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWF 180
           IE++M++I+  + P +++ ++ ++ARE+F+   + YK+E++E     E  +T+YRQGE+ 
Sbjct: 121 IEEEMKKIVKENFPSIREEVTKDQAREIFK--NDPYKLELIEEHSDDEGGLTIYRQGEYV 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ RIYGTAW  +++L  YL   EE
Sbjct: 179 DLCRGPHVPSTGRIQIFHLL-NVAGAYWRGNSDNAMMQRIYGTAWFDKKDLKNYLQMREE 237

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           +++RDHRKL +E+DLF I+++   G+ FW   G  I + L  Y+  +++   Y+ + TP 
Sbjct: 238 AKERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVDKEVAAGYQHVYTPP 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L++ SGHWD YR +MF          D   F L+PMNCP H+ V+ H + SYREL
Sbjct: 298 IASVELYKTSGHWDHYREDMFPPMDMG----DGEEFVLRPMNCPHHIEVYKHHVHSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  + +D H F   EQ+  E  KI  LII +Y+DF
Sbjct: 354 PIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHTFVAPEQIEEEFKKILQLIIDVYEDF 413

Query: 419 GFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
                  +LS R      K   +D +W++A+ ++K  +D +       +      GE AF
Sbjct: 414 NLTDYRFRLSYRDPEDKHKYFDNDEMWENAQRMLKAAVDDMG------VEYYEAEGEAAF 467

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K A+G++    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF
Sbjct: 468 YGPKLDIQVKTALGKEETLSTIQLDFLLPERFDLHYIGADGEEHRPVMIHRGVISTMERF 527

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
             I+IEN+KG  P WL+P Q  +  ++    V+YA E+A  L+   +  + D RNE + +
Sbjct: 528 TAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAKKLRDRGVRADVDERNEKMQF 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR    +KIP  +I GDKE  ++++ +RR+G   T+ +S+   + ++  +
Sbjct: 588 KIRASQTQKIPYQLIVGDKEMEDKAVNVRRYGQKETETMSVDAFVELILAD 638


>gi|85375301|ref|YP_459363.1| threonyl-tRNA synthetase [Erythrobacter litoralis HTCC2594]
 gi|123293655|sp|Q2N6X5|SYT_ERYLH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|84788384|gb|ABC64566.1| threonyl-tRNA synthetase [Erythrobacter litoralis HTCC2594]
          Length = 672

 Score =  651 bits (1680), Expect = 0.0,   Method: Composition-based stats.
 Identities = 317/672 (47%), Positives = 433/672 (64%), Gaps = 23/672 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           M   +K++ PDGS++     AT +DVA +I   LAK A+A  ++G+V DL+ P   +  +
Sbjct: 1   MTELLKISLPDGSVREMEAGATPADVAAAIGPGLAKAALAAKVDGEVRDLNRPFEGDAEL 60

Query: 60  EIIT-PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD---FDKEQPFS 115
            +IT  ++  +L + RH  AH++AEAVQ++WP  Q+  GP  +DGFYYD    D   PF 
Sbjct: 61  ALITSRDEEEALELARHDYAHVLAEAVQALWPGTQITFGPATDDGFYYDVKAPDSRDPFG 120

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            D+L  IE+KM+EII  D P +++  S E+  E +E++ E +K E  + +P  E +T+Y 
Sbjct: 121 MDDLPAIEEKMREIIKADKPLVREVWSREQLIEKWEAEGEVFKAEWAKELPEDEELTVYW 180

Query: 176 QGE------WFDLCRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQ 228
            GE      W D+CRGPH+ STG++  + FKLM+VAGAYWRGD   P L+RIYGT W  +
Sbjct: 181 SGEPGGEDSWLDMCRGPHLASTGKLDPQAFKLMRVAGAYWRGDQRNPQLTRIYGTGWLNK 240

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK 288
           ++L  +L+ LEE+ KRDHRKL REMDLFH+ E+  G +FWH +G+KI++ L +YMRRK+ 
Sbjct: 241 KQLNAHLHRLEEAAKRDHRKLGREMDLFHLQEEAHGSVFWHPQGYKIWRELEAYMRRKMD 300

Query: 289 -DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT--------FALKPM 339
              Y EI TPQV+D   W+QSGHW  YR NMF +       +D            ALKPM
Sbjct: 301 GAGYREIKTPQVMDARQWEQSGHWGKYRENMFVIPDEIPNTEDEGELVSKDADWMALKPM 360

Query: 340 NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQ 399
           NCP HV VF  G+ SYR+LP+RL E G  +RNEP G+LHGLMRVR FTQDDAH+FCT++Q
Sbjct: 361 NCPAHVLVFKQGITSYRDLPIRLGEMGCCHRNEPHGALHGLMRVRQFTQDDAHIFCTEDQ 420

Query: 400 MFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSS 459
           +  E      L   +Y+DFGF+   VKL+ RPE+R GS+  WD AE  ++  +     ++
Sbjct: 421 VVEEVRAFCKLADEVYRDFGFDY-DVKLALRPEQRFGSEEDWDKAEQELRDAVAEAGMAN 479

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
            D      L GEGAFY PK E+ L DAIGR WQ GTIQ D  LP R +A YV     K  
Sbjct: 480 DDY-GWEELPGEGAFYAPKLEWHLTDAIGRTWQVGTIQGDRVLPERLDATYVGEDGGKHR 538

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH 579
           PVM+HRA+FGS ERFIGI+IE+F G LP+WL+P QA+V TI S A  YA+E    L++  
Sbjct: 539 PVMLHRAIFGSYERFIGILIEHFAGRLPVWLAPTQAVVATIVSDADGYAKEAVAKLEAAG 598

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
           + ++ D RNE IN+K+REHS+ K+P +++ G +EA E ++ +R  G    Q +SL DAI 
Sbjct: 599 IRVDGDLRNEKINFKVREHSLAKVPHLLVVGKREAEEGTVAVRTLGEKEQQVMSLDDAIA 658

Query: 640 ILTKESLPPDCQ 651
           +L   + PPD +
Sbjct: 659 MLKDAATPPDLR 670


>gi|210623612|ref|ZP_03293938.1| hypothetical protein CLOHIR_01888 [Clostridium hiranonis DSM 13275]
 gi|210153482|gb|EEA84488.1| hypothetical protein CLOHIR_01888 [Clostridium hiranonis DSM 13275]
          Length = 638

 Score =  651 bits (1680), Expect = 0.0,   Method: Composition-based stats.
 Identities = 275/641 (42%), Positives = 400/641 (62%), Gaps = 17/641 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK++  +  +K F    +  DVA+SIS  LA+  VA  ++G+V  L   + ++ S+ ++
Sbjct: 1   MIKVSLKND-VKEFESGVSVLDVAKSISEGLARSIVAAEVDGEVVGLDTVLDKDCSVNLL 59

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
             ED     V RH+ +HI+A+A++ ++PE ++AIGP I++GFYYD D E     ++L  +
Sbjct: 60  KFEDKEGREVFRHTSSHILAQAIKRLYPEAKLAIGPAIDNGFYYDIDLEHSLVPEDLEAL 119

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M++I   D    +  L  E+A +L + K E YKVE++E +P    ++ Y+QG++ DL
Sbjct: 120 EKEMKKIAKEDLKIERFELPREEAIKLMQEKGEDYKVELIEDLPEDAVISFYKQGDFTDL 179

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPH+ ST +VK   KL  VAGAYWRGD NR ML RIYG ++   ++L ++L+ LEE++
Sbjct: 180 CAGPHLLSTKKVK-AVKLTSVAGAYWRGDENRKMLQRIYGVSFEKNKDLEEHLHMLEEAK 238

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KRDHRKL +E+ LF I E+G G      KG  +   L+ Y R      +Y EI TP +L+
Sbjct: 239 KRDHRKLGKELGLFMIPEEGPGFPLMLPKGMALKNALLEYWREVHRAAEYVEIETPIILN 298

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW  Y+ NM+ VK       D   +A+KPMNCPG +  +   + SYR+ P+R
Sbjct: 299 RKLWETSGHWYHYKENMYTVKI------DEEDYAIKPMNCPGGMLYYKSEMHSYRDFPMR 352

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AE G V+R+E SG+LHGLMRVR FTQDDAH+F   EQ+ +E   + +LI  IYK FGFE
Sbjct: 353 VAELGRVHRHELSGALHGLMRVRAFTQDDAHIFMLPEQIRDEIKGVISLIDGIYKTFGFE 412

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
             + +LSTRPE  +GSD  W+ AEN ++G L+ +       +   V  G+GAFYGPK ++
Sbjct: 413 YHL-ELSTRPEDSMGSDEEWEAAENGLRGALEELN------LPFVVNEGDGAFYGPKIDF 465

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L D IGR WQCGTIQ+D  LP +F+A Y+    EK  PVMIHR  FGSIERFIGI+IE 
Sbjct: 466 HLTDCIGRTWQCGTIQLDMQLPRQFDATYIGQDGEKHRPVMIHRVAFGSIERFIGILIEQ 525

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  P+WL+P Q  +  I+    +YA+++   L  + L +E D R E + +KIRE  ++
Sbjct: 526 YAGKFPVWLAPTQVKIIPISDKYADYAEKVRKELFDNGLRVEVDGRVEKVGFKIREAQLE 585

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           K+P ++I G+KE +E +I +R         V L   I  + 
Sbjct: 586 KVPYMVIVGEKEEAENNISVRSRDEGELGNVELAKFIEDVQ 626


>gi|322389968|ref|ZP_08063508.1| threonine--tRNA ligase [Streptococcus parasanguinis ATCC 903]
 gi|321143404|gb|EFX38842.1| threonine--tRNA ligase [Streptococcus parasanguinis ATCC 903]
          Length = 647

 Score =  651 bits (1680), Expect = 0.0,   Method: Composition-based stats.
 Identities = 262/648 (40%), Positives = 408/648 (62%), Gaps = 23/648 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  +  +GSIEI+
Sbjct: 1   MIKITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGSIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQ 121
           TP+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D +    S+++L +
Sbjct: 61  TPDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNQAGQISNEDLPR 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWF 180
           IE++M++I+  + P +++ ++ ++ARE+F+   + YK+E++E     E  +T+YRQGE+ 
Sbjct: 121 IEEEMKKIVKENFPSIREEVTKDEAREIFK--NDPYKLELIEEHSEDEGGLTIYRQGEYV 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ RIYGTAW  +++L  YL   EE
Sbjct: 179 DLCRGPHVPSTGRIQIFHLL-NVAGAYWRGNSDNAMMQRIYGTAWFDKKDLKNYLQMREE 237

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           +++RDHRKL +E+DLF I+++   G+ FW   G  I + L  Y+  +++   Y+ + TP 
Sbjct: 238 AKERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVDKEVAAGYQHVYTPP 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L++ SGHWD YR +MF          D   F L+PMNCP H+ V+ H + SYREL
Sbjct: 298 IASVELYKTSGHWDHYREDMFPPMDMG----DGEEFVLRPMNCPHHIEVYKHHVHSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  + +D H F   EQ+  E  KI  LII +Y+DF
Sbjct: 354 PIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHTFVAPEQIEEEFKKILQLIIDVYEDF 413

Query: 419 GFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
                  +LS R      K   +D +W++A+ ++K  +D +       +      GE AF
Sbjct: 414 NLTDYRFRLSYRDPEDKHKYFDNDEMWENAQRMLKAAVDDMG------VEYYEAEGEAAF 467

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K A+G++    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF
Sbjct: 468 YGPKLDIQVKTALGKEETLSTIQLDFLLPERFDLHYIGADGEEHRPVMIHRGVISTMERF 527

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
             I+IEN+KG  P WL+P Q  +  ++    V+YA E+A  L+   +  + D RNE + +
Sbjct: 528 TAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAKKLRDRGVRADVDERNEKMQF 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           KIR    +KIP  +I GDKE  ++++ +RR+G   T+ +S+   + ++
Sbjct: 588 KIRASQTQKIPYQLIVGDKEMEDKAVNVRRYGQKETETMSVDAFVELI 635


>gi|224476774|ref|YP_002634380.1| threonyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus
           TM300]
 gi|254783537|sp|B9DNC9|SYT_STACT RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|222421381|emb|CAL28195.1| threonyl-tRNA synthetase 1 [Staphylococcus carnosus subsp. carnosus
           TM300]
          Length = 647

 Score =  651 bits (1680), Expect = 0.0,   Method: Composition-based stats.
 Identities = 263/650 (40%), Positives = 400/650 (61%), Gaps = 21/650 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
             I +TFPDG+   F    T  ++A+SIS  L KKAVA   N K+ DL+ P+  +GSIEI
Sbjct: 2   DKINITFPDGNSTEFDKGITTEEIAQSISPGLRKKAVAGKFNDKMVDLTRPLEEDGSIEI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +TP    +L V+RHS AH+MA+A++ ++ +V+  +GP+I+ GFYYDFD +   SSD+  +
Sbjct: 62  VTPGSDEALEVLRHSTAHLMAQALKRLYGDVKFGVGPVIDGGFYYDFDTDVKISSDDFPE 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK M++I+  +    ++ +S E+A+E F+   + YK+E++++IP  E+VTLY QGE+ D
Sbjct: 122 IEKTMKQIVNENYKIERKVVSREEAKEFFK--DDPYKLELIDAIPEDESVTLYSQGEFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG HV ST ++K+F KL+  AGAYWRGDSN  ML RIYGTA+  +++L  +L  LEE 
Sbjct: 180 LCRGVHVPSTSKIKEF-KLLSTAGAYWRGDSNNKMLQRIYGTAFFDKKDLKAHLKMLEER 238

Query: 242 EKRDHRKLAREMDLFH-IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQV 299
           ++RDHRK+ +E+DLF      G+G+  W   G  I + +  Y+  K     Y+ + TP +
Sbjct: 239 KERDHRKIGKELDLFMNSQLVGAGLPLWLPNGATIRREIERYIVDKEVALGYDHVYTPVM 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +  L++ SGHWD Y+ +MF     D+T        L+PMNCP H+ ++ +   SYRELP
Sbjct: 299 ANVELYKTSGHWDHYQDDMFPPMKLDET----EEMVLRPMNCPHHMMIYKNKPHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G+++R E SG++ GL RVRG T +D+H+F   +Q+  E  ++  LI+ +Y+DFG
Sbjct: 355 IRIAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVELILDVYEDFG 414

Query: 420 FEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           FE    +LS R      K    D +W+ AE+++K  +D +    ++ I      GE AFY
Sbjct: 415 FENYSFRLSYRDPEDKEKYFDDDEMWERAESMLKEAVDEMGLPYEEAI------GEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G++    T Q+DF LP RF+  Y+    E+  PV+IHR V  ++ERF+
Sbjct: 469 GPKLDVQVKTAMGKEETLSTAQLDFLLPERFDLAYIGKDGEEHRPVVIHRGVVSTMERFV 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             + E  KG  P WL+P Q  +  +      +YA++I + LKS  + +E D RNE + YK
Sbjct: 529 AFLTEETKGAFPTWLAPKQVEIIPVNVDLHYDYARQIQDELKSQGVRVEIDDRNEKMGYK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IRE  + KIP  ++ GDKE     + +R++GS   + V   + I  L  E
Sbjct: 589 IREAQMHKIPYQLVIGDKEIENNEVNVRKYGSKDQETVEKDEFIWNLVDE 638


>gi|254369559|ref|ZP_04985570.1| threonyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FSC022]
 gi|157122513|gb|EDO66648.1| threonyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FSC022]
          Length = 634

 Score =  651 bits (1680), Expect = 0.0,   Method: Composition-based stats.
 Identities = 297/643 (46%), Positives = 424/643 (65%), Gaps = 16/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            I + FPDGSI+ F       DVA+SIS SLAK  +A  I+ ++ D  D +     + +I
Sbjct: 1   MINIRFPDGSIREFEAGVNSLDVAKSISPSLAKATMAAYIDDQLKDAKDAINSNCELRLI 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +DP  L ++RHSCAH++A AV+ ++P  +V IGP++++GFYYDF  ++     +L  I
Sbjct: 61  TVKDPEGLEILRHSCAHLLAHAVKELYPNTEVTIGPVVDNGFYYDFSFKESIGEADLPTI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EKKM+E+  + +P   + +   +A E F+++ E YKVEI++SI A E + +Y Q  + DL
Sbjct: 121 EKKMKELAKKSAPVSYRVVPKAEAIEFFKAQGENYKVEIIDSI-ADEQMKIYTQDNFSDL 179

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ +T  +K F KL K+AGAYWRG+S+  ML+RIYGT W T+++L QYL  LEE+E
Sbjct: 180 CRGPHIPNTSVLKAF-KLTKLAGAYWRGNSDNEMLTRIYGTCWATKEDLEQYLNMLEEAE 238

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KRDHRK+ + +DLFH  ED  G+ FWH  G +I++ +  YMR    K    EI TP + D
Sbjct: 239 KRDHRKIGKVLDLFHFQEDSPGIAFWHDNGVRIWRQVEDYMRASNNKYGCSEIRTPLIAD 298

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             LWQ+SGH   Y  NMFA K       + R FA++PMNCP  V V+N  L SYR+LP+R
Sbjct: 299 FSLWQKSGHASKYAENMFATK------SENRDFAIRPMNCPTCVQVYNTKLHSYRDLPIR 352

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AEFG V+RNEPSGSLHGL+RVR FTQDD H+FCT EQ+  E + +      +YKDFGF 
Sbjct: 353 MAEFGIVHRNEPSGSLHGLLRVRSFTQDDGHIFCTPEQVEEEVILMVQQCFEVYKDFGFN 412

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              VK++ RPE R+G D  WD +E ++K  LD       + ++  +  GEGAFYGPK E+
Sbjct: 413 DFAVKIALRPENRIGDDETWDKSEQMLKNALDA------NNVSYELFPGEGAFYGPKIEF 466

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            LKDAIGR WQCGTIQ+DF++P R  A Y++ + EK   VM+HRA+ GS+ERFIG++IE+
Sbjct: 467 HLKDAIGRSWQCGTIQLDFSMPQRLGATYIDKNGEKQVSVMLHRAIVGSLERFIGMLIEH 526

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + GNLPLWL+P+Q  V  I+++  +Y +E+  +L+ + +  + D RNE I +KIREH++ 
Sbjct: 527 YAGNLPLWLAPVQVAVMGISNNQDDYCKEVFIMLEKNGIRAKLDLRNEKIGFKIREHTLL 586

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           ++P ++I G  E  ++ I IR+       ++S+ D    L K+
Sbjct: 587 RVPYLVILGKNEQEQKIITIRKHSGEDLGQMSVDDFCAFLDKQ 629


>gi|229019800|ref|ZP_04176603.1| Threonyl-tRNA synthetase [Bacillus cereus AH1273]
 gi|229026025|ref|ZP_04182408.1| Threonyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228735241|gb|EEL85853.1| Threonyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228741525|gb|EEL91722.1| Threonyl-tRNA synthetase [Bacillus cereus AH1273]
          Length = 645

 Score =  651 bits (1680), Expect = 0.0,   Method: Composition-based stats.
 Identities = 252/654 (38%), Positives = 405/654 (61%), Gaps = 22/654 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           M   +K+TFPDG++K FP   T  ++A SIS  L KKAVA  +N ++ DL  P+  +G++
Sbjct: 1   MADVVKITFPDGAVKEFPKGVTTEEIAASISPGLKKKAVAGKLNDEMIDLVTPIEEDGAV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV--AIGPIIEDGFYYDFDKEQPFSSD 117
            IIT +    L ++RHS AH++A+A++ ++ +V++   IGP+IE+GFYYD D E+  + +
Sbjct: 61  SIITLDSEDGLYILRHSTAHLLAQALKRLYKDVKLELGIGPVIENGFYYDIDMEEAITVE 120

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +  +IEK+MQ+I+  +   ++  +   +A   FE   +  K++++  +P    +T+Y QG
Sbjct: 121 DFKKIEKEMQKIVNENLEIVRHEVPRAEALRRFEEIGDELKLDLINDLPEDAVITIYEQG 180

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           E+FDLCRG H+ STG++K F KL+ VAGAYWRGDSN  ML RIYGTA+  + EL ++L  
Sbjct: 181 EFFDLCRGVHLPSTGKIKVF-KLLSVAGAYWRGDSNNKMLQRIYGTAFVKKAELDEHLRM 239

Query: 238 LEESEKRDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEIN 295
           LEE+++RDHRKL +E+ LF +  + G G+  W  KG  I + +  Y+  ++    Y+ + 
Sbjct: 240 LEEAKERDHRKLGKELKLFTNSQKVGQGLPLWLPKGATIRRIIERYIVDKEASLGYDHVY 299

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP +  + L++ SGHW+ YR  MF     D+         L+PMNCP H+ V+ + + SY
Sbjct: 300 TPVLGSRELYETSGHWNHYRDGMFPSMEMDN-----EELVLRPMNCPHHMMVYKNDIHSY 354

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+  E  ++ NL + +Y
Sbjct: 355 RELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVY 414

Query: 416 KDFGFEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
           KDFG E    +LS R      K    D +W+ A+ ++K  +D +       ++     GE
Sbjct: 415 KDFGLENYSFRLSYRDPADTKKYYADDEMWEKAQGMLKEAMDEMG------LDYYEAEGE 468

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
            AFYGPK +  ++ A+G+D    T+Q+DF LP RF   YV    ++  PV+IHR V  ++
Sbjct: 469 AAFYGPKLDVQVRTALGKDETLSTVQLDFLLPERFELSYVGEDGKQHRPVVIHRGVVSTM 528

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNET 590
           ERF+  +IE +KG  P WL+P+QA V  ++    ++YA+++ + L+   + +E D R E 
Sbjct: 529 ERFVAFLIEEYKGAFPTWLAPVQAQVIPVSPQVHLDYAKKVQDELRRAGIRVELDTREEK 588

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           I YKIRE  ++KIP +++ GD E +E  + +R++G   ++ ++L   + ++  E
Sbjct: 589 IGYKIREAQMQKIPYMLVVGDNEVAENGVNVRKYGEQKSETIALDAFVDMIKVE 642


>gi|242242946|ref|ZP_04797391.1| threonyl-tRNA synthetase [Staphylococcus epidermidis W23144]
 gi|242233547|gb|EES35859.1| threonyl-tRNA synthetase [Staphylococcus epidermidis W23144]
          Length = 645

 Score =  651 bits (1680), Expect = 0.0,   Method: Composition-based stats.
 Identities = 259/650 (39%), Positives = 406/650 (62%), Gaps = 21/650 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           + I + FPDG+ K F    T  D+A+SIS  L KKAVA   NG++ DL+ P+  +G+IEI
Sbjct: 2   NQINIQFPDGNTKEFDKGTTTEDIAQSISPGLRKKAVAGKFNGQLVDLTRPLEQDGTIEI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           ITP    +L V+RHS AH+MA+A++ ++ +V+  +GP+IE GFYYDFD +   SSD+  +
Sbjct: 62  ITPGSEEALEVLRHSTAHLMAQALKRLYGDVKFGVGPVIEGGFYYDFDMDDKVSSDDFDK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK M++I+  +   +++ +S E+A++ F+   + YK+E++++IP  E+VTLY QGE+ D
Sbjct: 122 IEKTMKQIVNENHKIVREVVSKEEAKDFFK--DDPYKLELIDAIPDDESVTLYTQGEFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG HV ST ++K+F KL+  AGAYWRG+S+  ML RIYGTA+  +++L  +L  LEE 
Sbjct: 180 LCRGVHVPSTSKIKEF-KLLSTAGAYWRGNSDNKMLQRIYGTAFFDKKDLKAHLKMLEER 238

Query: 242 EKRDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
            +RDHRK+ ++++LF +    G+G+  W   G  I + +  Y+  +++   Y+ + TP +
Sbjct: 239 RERDHRKIGKDLELFTNNQLVGAGLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVL 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +  L++ SGHWD Y+ +MF     D+         L+PMNCP H+ ++ +   SYRELP
Sbjct: 299 ANVDLYKTSGHWDHYQEDMFPAMKLDED----EAMVLRPMNCPHHMMIYKNKPHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G+++R E SG++ GL RVRG T +D+H+F   +Q+  E  ++ N+I  +YKDFG
Sbjct: 355 IRIAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVNMIQDVYKDFG 414

Query: 420 FEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           FE    +LS R      K    D +W+ AE+++K   D +  + ++ I      GE AFY
Sbjct: 415 FEDYRFRLSYRDPEDKHKYFDDDEMWEKAESMLKEASDELGLTYEEAI------GEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G++    T Q+DF LP RF+  Y+    E+  PV+IHR V  ++ERF+
Sbjct: 469 GPKLDVQVKTAMGKEETLSTAQLDFLLPERFDLTYIGQDGEQHRPVVIHRGVVSTMERFV 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             + E  KG  P WL+P+Q  +  +      +YA+ + + LKS  + +E D RNE + YK
Sbjct: 529 AFLTEETKGAFPTWLAPMQVEIIPVNVDLHYDYARLLQDELKSQGVRVEIDDRNEKMGYK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IRE  +KKIP  I+ GDKE   + + +R++GS   + V   + I  +  E
Sbjct: 589 IREAQMKKIPYQIVVGDKEVENQEVNVRKYGSEKQESVEKDEFIWNVIDE 638


>gi|143764|gb|AAA22863.1| threonyl-tRNA synthetase (thrS2) (EC 6.1.1.3) [Bacillus subtilis]
          Length = 638

 Score =  651 bits (1679), Expect = 0.0,   Method: Composition-based stats.
 Identities = 278/646 (43%), Positives = 418/646 (64%), Gaps = 16/646 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           M   + +  PDG I+ +P   T  + A SIS SL KKA A  +NGK+ DLS  +  +  +
Sbjct: 1   MSKHVHIQLPDGQIQEYPKGITIKEAAGSISSSLQKKAAAGQVNGKLVDLSFKLEEDAEL 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            I+T +    L V+RH+ AH++A+AV+ ++ EV + +GP+I DGFYYD    +  +S +L
Sbjct: 61  SIVTLDSQEGLQVVRHTTAHVLAQAVKRLYGEVSLGVGPVILDGFYYDMKLGKSLASGDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEK+M+ II  +    +  +S+E+A ELF  K E  K+EIL+ IP  E++TLY+QGE+
Sbjct: 121 EAIEKEMKNIINENLEIKRIEVSYEEAEELFAQKDERLKLEILKDIPRGEDITLYQQGEF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPH+ STG +K F KL +V+GAYWRGDS   +L R+YG A+  +++L  +L+ LE
Sbjct: 181 VDLCRGPHLPSTGMIKAF-KLTRVSGAYWRGDSKNEVLQRVYGVAFQKKKDLDAHLHMLE 239

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+ KRDHRKL +++ LF  +E+  G+ F+  KG  +   L  + R  +    Y+E+ TP 
Sbjct: 240 EAAKRDHRKLGKQLGLFMFSEEAPGMPFYLPKGQIVRNELERFSRELQTNAGYDEVRTPF 299

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +++Q LW+QSGHWD YR NM+  +       D   FA+KPMNCPGH+ +F + L SYR+L
Sbjct: 300 MMNQRLWEQSGHWDHYRDNMYFSEV------DDTRFAMKPMNCPGHMLIFKNSLYSYRDL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG V+R+E SG+L+G++RVR F QDDAH+F  ++Q+ +E  +   LI  +Y+ F
Sbjct: 354 PIRMAEFGQVHRHEYSGALNGMLRVRTFCQDDAHIFVREDQIESEIKEAIRLIDEVYRTF 413

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE   V+LSTRPE  +G D+LW+ +E  +  VL+ +       ++  +  G+GAFYGPK
Sbjct: 414 GFEYS-VELSTRPEDSLGDDSLWEASERALARVLEELG------LSYEINEGDGAFYGPK 466

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++ +KDA+ R  QC TIQ+DF +P +F+  Y+N  +EK  PV+IHRAVFGSI+RF GI+
Sbjct: 467 IDFHIKDALKRSHQCATIQLDFQMPEKFDLTYINELNEKVRPVVIHRAVFGSIDRFFGIL 526

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE++ G  P+WL+PIQ  +  ++   ++Y +++   LK   +    D RNE + YKIRE 
Sbjct: 527 IEHYGGAFPVWLAPIQVQIIPVSHVHLDYCRKVQAELKQAGIRAGIDERNEKLGYKIRES 586

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            ++KIP +++ GD E  E ++ +RRFG    + V        L K+
Sbjct: 587 QVQKIPYVLVLGDHEEQENAVNVRRFGHQQNEHVPFQTFKDKLVKQ 632


>gi|110638045|ref|YP_678253.1| threonyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406]
 gi|123354610|sp|Q11UK3|SYT_CYTH3 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|110280726|gb|ABG58912.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Cytophaga
           hutchinsonii ATCC 33406]
          Length = 645

 Score =  651 bits (1679), Expect = 0.0,   Method: Composition-based stats.
 Identities = 262/649 (40%), Positives = 399/649 (61%), Gaps = 19/649 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            IK+T PDGSI+ +    T   +A SIS  LA+  +A  +NG++ D S  +  + +++++
Sbjct: 1   MIKITLPDGSIREYEKGITSMGIALSISEGLARNVLAAKVNGEIWDASRAITSDSTVQLL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
           T  D    +   HS AH++AEA+++++P  +  IGP IE GFYYD D  ++ FS D+   
Sbjct: 61  TWNDTEGKSTFWHSSAHLLAEALEALYPGTKFGIGPAIETGFYYDVDFGDRAFSQDDFEN 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEKK+ E+  + + ++++ +S + A   F  K++ YK+++LE +    ++T Y+QG + D
Sbjct: 121 IEKKVLELAKQKNAYIRKEISKKDAVAYFTDKQDPYKLDLLEGLS-DGSITFYKQGAFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+  TG +K   KLM VAGAYWRGD     L+RIYG  +  QQEL  YL  LEE+
Sbjct: 180 LCRGPHIPDTGFIK-AVKLMSVAGAYWRGDEKSKQLTRIYGVTFPKQQELKDYLTILEEA 238

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           +KRDHRKL +E++LF  +E    G+  W  KG  + + L +++++ +++  Y+ + TP +
Sbjct: 239 KKRDHRKLGKELELFAFSEKVGMGLPLWLPKGALLRERLENFLKKAQVRAGYQPVVTPHI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            ++ L+  SGH+D Y  + F       T  +   F LKPMNCP H  ++    +SY++LP
Sbjct: 299 GNKQLYVTSGHFDKYGKDSFQ---PIFTPHEGEQFLLKPMNCPHHCEIYKTKPRSYKDLP 355

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R AEFG+VYR E SG LHGL RVRGFTQDDAH+FC  +Q+  E LK+ +L++ ++K  G
Sbjct: 356 IRFAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCRPDQVKEEFLKVIDLVLYVFKVLG 415

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           F     ++S R  +     +G D  W  AE  +      I+ S++  ++T   LGE AFY
Sbjct: 416 FNDYTAQISLRDPENKDKYIGEDEQWQKAEQAI------IEASAEKGLSTVTELGEAAFY 469

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDA+GR WQ GTIQVD+ LP+RF   Y  S ++K  PVM+HRA FGS+ERFI
Sbjct: 470 GPKLDFMVKDALGRKWQLGTIQVDYQLPNRFELEYTGSDNQKHRPVMLHRAPFGSLERFI 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE+  GN PLWLSP Q  +  I+    +YAQ++ + L    +    D R+E I  KI
Sbjct: 530 AVLIEHVAGNFPLWLSPDQIAILPISEKFNDYAQDVYDRLLVKDIRGFIDNRDEKIGKKI 589

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R+  +KK+P +++ G+KE +E  I IR+ G      + + D I     E
Sbjct: 590 RDTEVKKVPFMLVIGEKEVNEGKIAIRKHGGEDLGSMLVEDFIQYFESE 638


>gi|309788453|ref|ZP_07683057.1| threonyl-tRNA synthetase [Shigella dysenteriae 1617]
 gi|308923835|gb|EFP69338.1| threonyl-tRNA synthetase [Shigella dysenteriae 1617]
          Length = 622

 Score =  651 bits (1679), Expect = 0.0,   Method: Composition-based stats.
 Identities = 293/632 (46%), Positives = 421/632 (66%), Gaps = 16/632 (2%)

Query: 24  SDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMA 82
            DVA  I   LAK  +A  +NG++ D  D +  +  + IIT +D   L +IRHSCAH++ 
Sbjct: 1   MDVALDIGPGLAKACIAGRVNGELVDACDLIENDTQLSIITAKDEEGLEIIRHSCAHLLG 60

Query: 83  EAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLS 142
            A++ +WP  ++AIGP+I++GFYYD D ++  + +++  +EK+M E+  ++   +K+ +S
Sbjct: 61  HAIKQLWPHTKMAIGPVIDNGFYYDVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVS 120

Query: 143 HEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLM 201
             +ARE F ++ E+YKV IL E+I   +   LY   E+ D+CRGPHV +      F KLM
Sbjct: 121 WHEARETFANRGESYKVSILDENIAHDDKPGLYFHEEYVDMCRGPHVPNMRFCHHF-KLM 179

Query: 202 KVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED 261
           K AGAYWRGDSN  ML RIYGTAW  ++ L  YL  LEE+ KRDHRK+ +++DL+H+ E+
Sbjct: 180 KTAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEE 239

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
             G++FWH  GW IF+ L  ++R K+K+  Y+E+  P ++D+ LW+++GHWD+Y+  MF 
Sbjct: 240 APGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFT 299

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
                 T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+AEFGS +RNEPSGSLHGL
Sbjct: 300 ------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGL 353

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           MRVRGFTQDDAH+FCT+EQ+ +E      L+  +Y  FGFEKI+VKLSTRPEKR+GSD +
Sbjct: 354 MRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEKIVVKLSTRPEKRIGSDEM 413

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDF 500
           WD AE  +   L+      ++ I     LGEGAFYGPK E+ L D + R WQCGT+Q+DF
Sbjct: 414 WDRAEADLAVALE------ENNIPFEYQLGEGAFYGPKIEFTLYDCLDRAWQCGTVQLDF 467

Query: 501 NLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTI 560
           +LPSR +A YV   +E+  PVMIHRA+ GS+ERFIGI+ E F G  P WL+P+Q ++  I
Sbjct: 468 SLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVIMNI 527

Query: 561 TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
           T S  +Y  E+   L +  + ++ D RNE I +KIREH+++++P +++CGDKE     + 
Sbjct: 528 TDSQSDYVNELTQKLSNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVA 587

Query: 621 IRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           +R         + + + I  L +E      ++
Sbjct: 588 VRTRRGKELGSMDVNEVIEKLQQEIRSRSLKQ 619


>gi|322392280|ref|ZP_08065741.1| threonine--tRNA ligase [Streptococcus peroris ATCC 700780]
 gi|321144815|gb|EFX40215.1| threonine--tRNA ligase [Streptococcus peroris ATCC 700780]
          Length = 647

 Score =  651 bits (1679), Expect = 0.0,   Method: Composition-based stats.
 Identities = 261/651 (40%), Positives = 407/651 (62%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I++TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  +  +GSIEI+
Sbjct: 1   MIQITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRDITEDGSIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQ 121
           TP+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D      S+++L +
Sbjct: 61  TPDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNPAGQISNEDLPR 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-ENVTLYRQGEWF 180
           IE++M++I+  + P +++ ++ ++ARE+F+   + YK+E++E        +T+YRQGE+ 
Sbjct: 121 IEEEMKKIVKENFPSIREEVTKDEAREIFK--NDPYKLELIEEHSEDAGGLTIYRQGEYV 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ RIYGTAW  +++L  YL   EE
Sbjct: 179 DLCRGPHVPSTGRIQVFHLL-NVAGAYWRGNSDNAMMQRIYGTAWFDKKDLKDYLQMREE 237

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           +++RDHRKL +E+DLF I+++   G+ FW   G  I + L  Y+  +++   Y+ + TP 
Sbjct: 238 AKERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRILERYIVDKEVAAGYQHVYTPP 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L++ SGHWD YR +MF          D   F L+PMNCP H+ V+ H + SYREL
Sbjct: 298 IASVELYKTSGHWDHYREDMFPPMDMG----DGEEFVLRPMNCPHHIEVYKHHVHSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  + +D H F   EQ+ +E  KI  LII +Y+DF
Sbjct: 354 PIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHTFVAPEQIEDEFKKILQLIIDVYEDF 413

Query: 419 GFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
                  +LS R      K   +D +W++A+ ++K  +D +       +      GE AF
Sbjct: 414 NLTDYRFRLSYRDPADKHKYFDNDEMWENAQRMLKAAVDDMG------VEYYEAEGEAAF 467

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K A+G++    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF
Sbjct: 468 YGPKLDIQMKTALGKEETLSTIQLDFLLPERFDLHYIGADGEEHRPVMIHRGVISTMERF 527

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
             I+IEN+KG  P WL+P Q  V  ++    V+YA E+A  L+   + ++ D RNE + +
Sbjct: 528 TAILIENYKGAFPTWLAPHQVTVIPVSNEKHVDYAWEVAKKLRDRGVRVDVDERNEKMQF 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR    +KIP  +I GDKE  E ++ +RR+G   T+ + +   + ++  +
Sbjct: 588 KIRASQTQKIPYQLIVGDKEMDENAVNVRRYGQKETETMPVDAFVELILAD 638


>gi|319400998|gb|EFV89217.1| threonyl-tRNA synthetase [Staphylococcus epidermidis FRI909]
          Length = 645

 Score =  651 bits (1679), Expect = 0.0,   Method: Composition-based stats.
 Identities = 260/650 (40%), Positives = 406/650 (62%), Gaps = 21/650 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           + I + FPDG+ K F    T  D+A+SIS  L KKAVA   NG++ DL+ P+  +G+IEI
Sbjct: 2   NQINIQFPDGNTKEFDKGTTTEDIAQSISPGLRKKAVAGKFNGQLVDLTRPLEQDGTIEI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           ITP    +L V+RHS AH+MA+A++ ++ +V+  +GP+IE GFYYDFD E   SSD+  +
Sbjct: 62  ITPGSEEALEVLRHSTAHLMAQALKRLYGDVKFGVGPVIEGGFYYDFDMEDKVSSDDFDK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK M++I+  +   +++ +S E+A++ F+   + YK+E++++IP  E+VTLY QGE+ D
Sbjct: 122 IEKTMKQIVNENHKIVREVVSKEEAKDFFK--DDPYKLELIDAIPDDESVTLYTQGEFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG HV ST ++K+F KL+  AGAYWRG+S+  ML RIYGTA+  +++L  +L  LEE 
Sbjct: 180 LCRGVHVPSTSKIKEF-KLLSTAGAYWRGNSDNKMLQRIYGTAFFDKKDLKAHLKMLEER 238

Query: 242 EKRDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
            +RDHRK+ ++++LF +    G+G+  W   G  I + +  Y+  +++   Y+ + TP +
Sbjct: 239 RERDHRKIGKDLELFTNNQLVGAGLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVL 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +  L++ SGHWD Y+ +MF     D+         L+PMNCP H+ ++ +   SYRELP
Sbjct: 299 ANVDLYKTSGHWDHYQEDMFPAMKLDED----EAMVLRPMNCPHHMMIYKNKPHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G+++R E SG++ GL RVRG T +D+H+F   +Q+  E  ++ N+I  +YKDFG
Sbjct: 355 IRIAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVNMIQDVYKDFG 414

Query: 420 FEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           FE    +LS R      K    D +W+ AE+++K   D +  + ++ I      GE AFY
Sbjct: 415 FEDYRFRLSYRDPEDKHKYFDDDEMWEKAESMLKEASDELGLTYEEAI------GEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G++    T Q+DF LP RF+  Y+    E+  PV+IHR V  ++ERF+
Sbjct: 469 GPKLDVQVKTAMGKEETLSTAQLDFLLPERFDLTYIGQDGEQHRPVVIHRGVVSTMERFV 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             + E  KG  P WL+P+Q  +  +      +YA+ + + LKS  + +E D RNE + YK
Sbjct: 529 AFLTEETKGAFPTWLAPMQVEIIPVNVDLHYDYARLLQDELKSQGVRVEIDDRNEKMGYK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IRE  +KKIP  I+ GDKE   + + +R++GS   + V   + I  +  E
Sbjct: 589 IREAQMKKIPYQIVVGDKEVENQEVNVRKYGSEKQESVEKDEFIWNVIDE 638


>gi|157145991|ref|YP_001453310.1| threonyl-tRNA synthetase [Citrobacter koseri ATCC BAA-895]
 gi|157083196|gb|ABV12874.1| hypothetical protein CKO_01745 [Citrobacter koseri ATCC BAA-895]
          Length = 622

 Score =  651 bits (1679), Expect = 0.0,   Method: Composition-based stats.
 Identities = 293/632 (46%), Positives = 422/632 (66%), Gaps = 16/632 (2%)

Query: 24  SDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMA 82
            DVA  I   LAK  +A  +NG++ D SD +  +  + IIT +D   L +IRHSCAH++ 
Sbjct: 1   MDVALDIGPGLAKACIAGRVNGELVDASDLIENDAQLAIITAKDEEGLEIIRHSCAHLLG 60

Query: 83  EAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLS 142
            A++ +WP  ++AIGP++++GFYYD D ++  + +++  +EK+M E+  ++   +K+ +S
Sbjct: 61  HAIKQLWPNTKMAIGPVVDNGFYYDIDLDRTLTQEDVDALEKRMHELAEKNYDVIKKKVS 120

Query: 143 HEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLM 201
             +ARE F  + E YKV IL E+I   +   LY   E+ D+CRGPHV +      F KLM
Sbjct: 121 WHEARETFVKRGETYKVSILDENIAHDDKPGLYHHEEYVDMCRGPHVPNMRFCHHF-KLM 179

Query: 202 KVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED 261
           K AGAYWRGDSN  ML RIYGTAW  ++ L  YL  LEE+ KRDHRK+ +++DL+H+ E+
Sbjct: 180 KTAGAYWRGDSNNKMLQRIYGTAWADKKSLNAYLQRLEEAAKRDHRKIGKQLDLYHMQEE 239

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
             G++FWH  GW IF+ L  ++R K+K+  Y+E+  P ++D+ LW+++GHW++Y+  MF 
Sbjct: 240 APGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWENYKDAMFT 299

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
                 T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+AEFGS +RNEPSG+LHGL
Sbjct: 300 ------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGL 353

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           MRVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  FGFEKI+VKLSTRPEKR+GSD +
Sbjct: 354 MRVRGFTQDDAHIFCTEEQIRDEVNACIRMVYDMYSTFGFEKIVVKLSTRPEKRIGSDEM 413

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDF 500
           WD AE  +   L+      ++ I     LGEGAFYGPK E+ L D + R WQCGT+Q+DF
Sbjct: 414 WDRAEADLAVALE------ENNIPFEYQLGEGAFYGPKIEFTLYDCLDRAWQCGTVQLDF 467

Query: 501 NLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTI 560
           +LPSR NA YV  ++E+  PVMIHRA+ GS+ERFIGI+ E F G  P WL+P+Q +V  I
Sbjct: 468 SLPSRLNASYVGENNERQVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVVMNI 527

Query: 561 TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
           T +  EY  E+   L++  + ++ D RNE I +KIREH+++++P +++CGDKE     + 
Sbjct: 528 TDTQSEYVNELTQKLQNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVA 587

Query: 621 IRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           +R         + + + I  L +E      Q+
Sbjct: 588 VRTRRGKDLGSLDVNEVIEKLQQEIRSRSLQQ 619


>gi|312128091|ref|YP_003992965.1| threonyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
 gi|311778110|gb|ADQ07596.1| threonyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
          Length = 639

 Score =  651 bits (1679), Expect = 0.0,   Method: Composition-based stats.
 Identities = 278/644 (43%), Positives = 404/644 (62%), Gaps = 17/644 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
             I +T PDG I       +  +  ++IS  L K+AVA  I+G + DL   +  + S E+
Sbjct: 2   DKIAVTLPDGKIVEAEKGISAMEFIKTISMRLYKEAVACKIDGVLKDLWTSLEKDCSFEV 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           +T  +     V  H+ +HI+A+AV+ ++ + V++ IGP I++GFYYDFD E+  + + L 
Sbjct: 62  VTFSNDEGKKVYWHTTSHILAQAVKRLFGDKVKLGIGPAIDNGFYYDFDVEESITMELLE 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IE++MQ+II  D    +  LS E+A +L + K E YKVE++  IP  E ++ YRQGE+ 
Sbjct: 122 KIEEEMQKIIKEDLKIERFELSREEAVKLMQEKGENYKVELINDIPEGETISFYRQGEFV 181

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLC GPH+ STG+VK F KL+ VAGAYWRG+S   ML R+YG ++  + +L +YL  LEE
Sbjct: 182 DLCTGPHLPSTGRVKAF-KLLSVAGAYWRGNSKNKMLQRVYGISYEKKSQLDEYLTMLEE 240

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQV 299
           +++RDHRKL RE+DLF I E+G G  F+  KG  I   L  + R + K   Y+EI TP +
Sbjct: 241 AKRRDHRKLGRELDLFDIFEEGPGFPFFLPKGMIIRNILEDFWREEHKKRGYQEIKTPIM 300

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           L + LW QSGHWD Y+ NM+  K       D + FA+KPMNCPG + V+     SYRELP
Sbjct: 301 LTKDLWVQSGHWDHYKENMYFTKI------DDQEFAIKPMNCPGSILVYKRKSHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
            RL E G V+R+E SG LHGLMRVR FTQDDAH+F    Q+ +E   + +LI   Y  FG
Sbjct: 355 ERLCELGLVHRHELSGVLHGLMRVRCFTQDDAHIFMLPSQIKDEIKGVIDLIDYFYSVFG 414

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F+   V+LSTRPE  +G+D  W+ AE  +K  L+ +       I+  +  G+GAFYGPK 
Sbjct: 415 FKYH-VELSTRPEISMGTDEQWNMAETALKEALEEVG------IDYKINEGDGAFYGPKI 467

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           ++ L+D++ R WQC TIQ+DF +P RF+ +Y+     K  PVM+HR VFGSIERFI I+ 
Sbjct: 468 DFHLEDSLKRTWQCATIQLDFQMPERFDLYYIGEDGAKHRPVMLHRVVFGSIERFIAILT 527

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E+F G  P+WL+P Q  V  ++ +  +YA +I+  LK +   +E D+R+ET+ YKIR+  
Sbjct: 528 EHFAGAFPVWLAPTQIRVIPVSDNFNDYAAKISQTLKENGFRVEEDYRSETVGYKIRDAQ 587

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           ++KIP ++I G+KE  E +I +R          ++   + ++ +
Sbjct: 588 LQKIPYMVIVGEKERRENTIAVRDRKKGDLGSFTIDKFVSMVKE 631


>gi|328951014|ref|YP_004368349.1| threonyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884]
 gi|328451338|gb|AEB12239.1| threonyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884]
          Length = 647

 Score =  651 bits (1679), Expect = 0.0,   Method: Composition-based stats.
 Identities = 281/652 (43%), Positives = 406/652 (62%), Gaps = 25/652 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEII 62
            + +  PDG     P  AT  DVAE ISRSLAK+AV   +NG++ D+  P+ EG+ + II
Sbjct: 1   MMTVRLPDGKPLELPQGATAKDVAERISRSLAKEAVGAIVNGELYDVFKPLPEGAEVRII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPE-------VQVAIGPIIEDGFYYDFDKEQPFS 115
           T +DP    + RH+ AH++A+AV+  + E       V++ +GP+IE+GFYYD D  +P S
Sbjct: 61  TRKDPEYQHLFRHTLAHVLAQAVKEFFQEKGYDPDAVKLGVGPVIENGFYYDIDAPEPIS 120

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
             +L  IEK+M  I+ R+ P  +  LS E+A   +   K+ YK E+++ +P  E ++ Y 
Sbjct: 121 DSDLPAIEKRMHHILKRNLPLRRYVLSREEALARYRG-KDPYKTELIQDLPEDEEISFYE 179

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
           Q  + DLCRGPHV STG++  FFKL  VAGAYWRGD  RPML R+YG A+ T++EL  YL
Sbjct: 180 QEGFTDLCRGPHVPSTGKIPPFFKLTHVAGAYWRGDETRPMLQRVYGVAFRTKEELDHYL 239

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRRK-IKDDYEE 293
           + LEE++KRDHRKL RE++LF I      G+  W  KG  + + L+ +MR + ++  Y+ 
Sbjct: 240 WQLEEAKKRDHRKLGRELELFLIDPMVGKGLPLWLPKGNTVRELLVQFMREEQLRRGYQL 299

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           + TP V    L++ SGH+  Y  + F     +D       + LKPMNCP H+ ++    +
Sbjct: 300 VTTPHVGSLELYKTSGHYPYYADSQFPPIELEDEA-----YLLKPMNCPHHIRIYAARPR 354

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYRELP+RLAEFG+VYR E SG LHGL RVRGFTQDDAH+FCT EQ+  E L + +L + 
Sbjct: 355 SYRELPLRLAEFGTVYRFEQSGELHGLTRVRGFTQDDAHIFCTPEQVKEEFLSVLDLTMH 414

Query: 414 IYKDFGFEKIMVKLSTRPE---KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
           +++  G E    ++  R     K VG DA W  AE  ++   + +       +   V  G
Sbjct: 415 VFRTLGMENYRARIGVRDPSSDKYVGEDAKWALAERQIQEACEEVG------LAYTVEAG 468

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           + AFYGPK +++++DA+GR+WQ GTIQVD+NLP RF+  YV    E   PVMIHRA FGS
Sbjct: 469 DAAFYGPKLDFVVRDALGREWQLGTIQVDYNLPERFDLTYVGPDGEPHRPVMIHRAPFGS 528

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
           +ERFIGI+IE+F G  PLWL+P+Q +V  IT   + YA+E+A  L+   + +E D R+E 
Sbjct: 529 LERFIGILIEHFAGEFPLWLAPVQVVVVPITDRHLAYAREVAQALREAGIRVEVDTRSER 588

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +N KIR+   +K+P+I++ GD+E ++R++ +R   +       L   +  L 
Sbjct: 589 MNAKIRDAETQKVPVILVVGDQEVAQRTVAVRDRRTKERATRPLEAVVQDLV 640


>gi|218899729|ref|YP_002448140.1| threonyl-tRNA synthetase [Bacillus cereus G9842]
 gi|228903093|ref|ZP_04067229.1| Threonyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
 gi|228910399|ref|ZP_04074214.1| Threonyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
 gi|218543438|gb|ACK95832.1| threonyl-tRNA synthetase [Bacillus cereus G9842]
 gi|228849165|gb|EEM94004.1| Threonyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
 gi|228856502|gb|EEN01026.1| Threonyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
          Length = 645

 Score =  651 bits (1679), Expect = 0.0,   Method: Composition-based stats.
 Identities = 250/654 (38%), Positives = 404/654 (61%), Gaps = 22/654 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           M   +K+TFPDG++K FP   T  ++A SIS  L KKAVA  +N ++ DL  P+  +G++
Sbjct: 1   MADVVKITFPDGAVKEFPKGVTTEEIAASISPGLKKKAVAGKLNDEMIDLVTPIEEDGAV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV--AIGPIIEDGFYYDFDKEQPFSSD 117
            IIT +    L ++RHS AH++A+A++ ++ +V++   IGP+IE+GFYYD D E+  + +
Sbjct: 61  SIITLDSEDGLYILRHSTAHLLAQALKRLYKDVKLELGIGPVIENGFYYDIDMEEAITVE 120

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +  +IEK+MQ+I+  +   ++  +   +A   FE   +  K++++  +P    +++Y QG
Sbjct: 121 DFKKIEKEMQKIVNENLEIVRHEVPRAEALRRFEEIGDELKLDLINDLPEDAVISIYEQG 180

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           E+FDLCRG H+ STG++K F KL+ VAGAYWRGDSN  ML RIYGTA+  + EL ++L  
Sbjct: 181 EFFDLCRGVHLPSTGKIKVF-KLLSVAGAYWRGDSNNKMLQRIYGTAFVKKAELDEHLRM 239

Query: 238 LEESEKRDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEIN 295
           LEE+++RDHRKL +E+ LF +  + G G+  W  KG  I + +  Y+  ++    Y+ + 
Sbjct: 240 LEEAKERDHRKLGKELKLFTNSQKVGQGLPLWLPKGATIRRIIERYIVDKEASLGYDHVY 299

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP +  + L++ SGHW+ YR  MF     D+         L+PMNCP H+ V+ + + SY
Sbjct: 300 TPVLGSRELYETSGHWNHYRDGMFPSMEMDN-----EELVLRPMNCPHHMMVYKNDIHSY 354

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+  E  ++ NL + +Y
Sbjct: 355 RELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVY 414

Query: 416 KDFGFEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
           KDFG E    +LS R      K    D +W+ A+ ++K  +D +       ++     GE
Sbjct: 415 KDFGLENYSFRLSYRDPADTKKYYADDEMWEKAQGMLKEAMDEMG------LDYYEAEGE 468

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
            AFYGPK +  ++ A+G+D    T+Q+DF LP RF   YV    ++  PV+IHR V  ++
Sbjct: 469 AAFYGPKLDVQVRTALGKDETLSTVQLDFLLPERFELTYVGEDGKQHRPVVIHRGVVSTM 528

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNET 590
           ERF+  +IE +KG  P WL+P+Q  V  ++    ++YA+++ + L+   + +E D R E 
Sbjct: 529 ERFVAFLIEEYKGAFPTWLAPVQVQVIPVSPQVHLDYAKKVQDELRRAGIRVELDTREEK 588

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           I YKIRE  ++KIP +++ GD E +E  + +R++G   ++ ++L   + ++  E
Sbjct: 589 IGYKIREAQMQKIPYMLVVGDNEVTENGVNVRKYGEQKSETIALDAFVDMIKVE 642


>gi|296876104|ref|ZP_06900158.1| threonine--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
 gi|296432815|gb|EFH18608.1| threonine--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
          Length = 647

 Score =  651 bits (1678), Expect = 0.0,   Method: Composition-based stats.
 Identities = 262/648 (40%), Positives = 408/648 (62%), Gaps = 23/648 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  +  +G+IEI+
Sbjct: 1   MIKITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGNIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQ 121
           TP+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D +    S+++L +
Sbjct: 61  TPDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNQAGQISNEDLPR 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWF 180
           IE++M++I+  + P +++ ++ ++ARE+F+   + YK+E++E     E  +T+YRQGE+ 
Sbjct: 121 IEEEMKKIVKENFPSIREEVTKDQAREIFK--NDPYKLELIEEHSEDEGGLTIYRQGEYI 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ RIYGTAW  +++L  YL   EE
Sbjct: 179 DLCRGPHVPSTGRIQIFHLL-NVAGAYWRGNSDNAMMQRIYGTAWFDKKDLKNYLQMREE 237

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           +++RDHRKL +E+DLF I+++   G+ FW   G  I + L  Y+  ++I   Y+ + TP 
Sbjct: 238 AKERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVDKEIAAGYQHVYTPP 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L++ SGHWD YR +MF          D   F L+PMNCP H+ V+ H + SYREL
Sbjct: 298 IASVELYKTSGHWDHYREDMFPPMDMG----DGEEFVLRPMNCPHHIEVYKHHVHSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  + +D H F   EQ+  E  KI  LII +Y+DF
Sbjct: 354 PIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHTFVAPEQIEEEFKKILQLIIDVYEDF 413

Query: 419 GFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
                  +LS R      K   +D +W++A+ ++K  +D +       +      GE AF
Sbjct: 414 NLTDYRFRLSYRDPEDKHKYFDNDEMWENAQRMLKAAVDDMG------VEYYEAEGEAAF 467

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K A+G++    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF
Sbjct: 468 YGPKLDIQVKTALGKEETLSTIQLDFLLPERFDLHYIGADGEEHRPVMIHRGVISTMERF 527

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
             I+IEN+KG  P WL+P Q  +  ++    V+YA E+A  L+   +  + D RNE + +
Sbjct: 528 TAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAKQLRDRGVRADVDERNEKMQF 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           KIR    +KIP  +I GDKE  ++++ +RR+G   T+ +S+   + ++
Sbjct: 588 KIRASQTQKIPYQLIVGDKEMEDKAVNVRRYGQKETETMSVDAFVELI 635


>gi|193215696|ref|YP_001996895.1| threonyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110]
 gi|238692696|sp|B3QUU7|SYT_CHLT3 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|193089173|gb|ACF14448.1| threonyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110]
          Length = 659

 Score =  651 bits (1678), Expect = 0.0,   Method: Composition-based stats.
 Identities = 263/652 (40%), Positives = 404/652 (61%), Gaps = 16/652 (2%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIE 60
              IKLT P+G ++ +P   TGS+VA SI + LA+ A+A+   GK+ DL+ P++ +G+IE
Sbjct: 8   SELIKLTLPNGDVRAYPKGVTGSEVAASIGKRLAEDALAIKFGGKLKDLAFPIQQDGAIE 67

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           I+T +     A+  HS +H+MA+A++ ++P  +   GP IE GFYYD   E  FS  +L 
Sbjct: 68  IVTFDSDEGKALYWHSSSHLMAQAIEELFPGTKFGAGPSIETGFYYDVASEHRFSEADLR 127

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKE-AYKVEILES-IPAKENVTLYRQGE 178
           +IE +M EI  RD    ++ LS E A E F++++E  +KVEILE  +     V++Y QGE
Sbjct: 128 EIEARMLEISNRDLQIQREELSREAAIEYFKTRREDPFKVEILEDTLKDTPVVSIYHQGE 187

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + DLC GPH  ST ++K       ++G++WRGD++R  + RIYG ++ +++ L ++   +
Sbjct: 188 FSDLCSGPHFSSTSKLKAVRLT-SISGSFWRGDASRQQMQRIYGVSFPSEKLLKKHFSQI 246

Query: 239 EESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINT 296
           EE++KRDHRKL  E++LF I+ + GSG+  W  KG  +   L S+++  + +  Y  + T
Sbjct: 247 EEAKKRDHRKLGSELELFMISPEVGSGLPMWLPKGAILRNELESFLKDEQRRRGYLPVVT 306

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P + +  L++ SGH+  Y  + F      D +     + LKPMNCP H  +++   +SYR
Sbjct: 307 PHIGNIELYKTSGHYPYYSDSQFPPLTFTDELGKEEQYLLKPMNCPHHHQIYSSKPRSYR 366

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +LP+RL EFG+VYR E SG L+GL+RVRGFTQDD+H++C ++Q+ +E  K  +L   ++K
Sbjct: 367 DLPIRLTEFGTVYRYEQSGELNGLIRVRGFTQDDSHIYCRQDQLVDEICKAIDLTQFVFK 426

Query: 417 DFGFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
             GF ++  +LS R  +      G++ +W  AE  +K   D ++      +N  + LGE 
Sbjct: 427 TLGFAEVQTRLSLRDPENTSKYSGNNEVWVQAEQDLKDAADKMQ------LNYFIGLGEA 480

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           +FYGPK ++I++DAIGR WQ GT+QVD+ +P RF+  YV S  +K  PV+IHRA FGS+E
Sbjct: 481 SFYGPKIDFIVRDAIGRKWQLGTVQVDYVMPERFDLTYVGSDGQKHRPVVIHRAPFGSLE 540

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
           RFIGI+IENF GN P+WLSP+Q +V  IT    +YA  +   L    +  E D R E + 
Sbjct: 541 RFIGILIENFAGNFPVWLSPVQVMVLPITDDFRDYAHSVLQKLLDAGIRAEIDERGEKVG 600

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            KIR+  IKKIP + + G+KE +  S+ +RR        + L +AI +L  +
Sbjct: 601 KKIRDAEIKKIPYMFVVGEKEMAAASVAVRRHKEGDKGTMPLQEAIRLLQTD 652


>gi|294619108|ref|ZP_06698603.1| threonyl-tRNA synthetase [Enterococcus faecium E1679]
 gi|291594769|gb|EFF26151.1| threonyl-tRNA synthetase [Enterococcus faecium E1679]
          Length = 646

 Score =  651 bits (1678), Expect = 0.0,   Method: Composition-based stats.
 Identities = 262/651 (40%), Positives = 401/651 (61%), Gaps = 24/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            IK+TFPDG++K F    T   +AESIS+SLAKKA+A  +NGK+ DL+ P+  + SIEII
Sbjct: 1   MIKITFPDGAVKEFESGTTTLAIAESISKSLAKKALAGKVNGKLVDLTRPIEEDASIEII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQ 121
           TP+   +L ++RHS AH+MA+A++ ++P +   +GP I+ GFYYD D  Q   ++++L  
Sbjct: 61  TPDHEDALGLVRHSAAHLMAQAMRRLYPNIHFGVGPAIDSGFYYDTDNGQNQVTAEDLPA 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE +M +I+  + P  ++ LS ++A E+     + YKVE++  +P  E +T Y+QGE+ D
Sbjct: 121 IEAEMMKIVKENLPIERRVLSKQEALEI--FASDPYKVELISELPE-EVITAYQQGEFID 177

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++ F KL+ VAGAYWRG+SN  M+ R+YGTA+  ++ L +Y+   EE+
Sbjct: 178 LCRGPHVPSTGRIQVF-KLLSVAGAYWRGNSNNQMMQRVYGTAFFDKKALKEYIRLREEA 236

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF ++ + GSG+ FW  KG  I +T+  Y+  +++   Y+ + TP +
Sbjct: 237 KERDHRKLGKELDLFMVSPEVGSGLPFWLPKGATIRRTIERYIVDKEVSLGYQHVYTPIM 296

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            D  L++ SGHWD Y+ +MF          D     L+PMNCP H+ V+ + + SYRELP
Sbjct: 297 GDVELYKTSGHWDHYQEDMFPPMDMG----DGEMLVLRPMNCPHHMMVYKNTIHSYRELP 352

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  +   L++++Y DF 
Sbjct: 353 IRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVAVYADFN 412

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R           DA+W+ A+ ++K  +D ++      ++     GE AFY
Sbjct: 413 ITDYRFRLSYRDPNNTDKYFDDDAMWEKAQAMLKAAMDELE------LDYFEAEGEAAFY 466

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK-CHPVMIHRAVFGSIERF 534
           GPK +  +K A+G +    TIQ+DF LP RF+  YV    E    PV+IHR +  ++ERF
Sbjct: 467 GPKLDVQVKTALGTEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTMERF 526

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           +  + E +KG  P WL+PIQA +  ++  +  +YA EI   L+   L +E D RNE + Y
Sbjct: 527 VAYLTEVYKGAFPTWLAPIQATIIPVSVDAHGDYAYEIKERLQMKGLRVEVDDRNEKMGY 586

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR    +KIP  ++ GDKE  + ++ +RR+GS  T    L   I  +  E
Sbjct: 587 KIRASQTQKIPYQLVVGDKELEDATVNVRRYGSKETAVEDLNIFIDAMEAE 637


>gi|228941754|ref|ZP_04104301.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228974678|ref|ZP_04135244.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228981272|ref|ZP_04141572.1| Threonyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228778472|gb|EEM26739.1| Threonyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228785081|gb|EEM33094.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228817966|gb|EEM64044.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|326942359|gb|AEA18255.1| threonyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 645

 Score =  651 bits (1678), Expect = 0.0,   Method: Composition-based stats.
 Identities = 250/654 (38%), Positives = 404/654 (61%), Gaps = 22/654 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           M   +K+TFPDG++K FP   T  ++A SIS  L KKAVA  +N ++ DL  P+  +G++
Sbjct: 1   MADVVKITFPDGAVKEFPKGVTTEEIAASISPGLKKKAVAGKLNDEMIDLVTPIEEDGAV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV--AIGPIIEDGFYYDFDKEQPFSSD 117
            IIT +    L ++RHS AH++A+A++ ++ +V++   IGP+IE+GFYYD D E+  + +
Sbjct: 61  SIITLDSEDGLYILRHSTAHVLAQALKRLYKDVKLELGIGPVIENGFYYDIDMEEAITVE 120

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +  +IEK+MQ+I+  +   ++  +   +A   FE   +  K++++  +P    +++Y QG
Sbjct: 121 DFKKIEKEMQKIVNENLEIVRHEVPRAEALRRFEEIGDELKLDLINDLPEDAVISIYEQG 180

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           E+FDLCRG H+ STG++K F KL+ VAGAYWRGDSN  ML RIYGTA+  + EL ++L  
Sbjct: 181 EFFDLCRGVHLPSTGKIKVF-KLLSVAGAYWRGDSNNKMLQRIYGTAFVKKAELDEHLRM 239

Query: 238 LEESEKRDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEIN 295
           LEE+++RDHRKL +E+ LF +  + G G+  W  KG  I + +  Y+  ++    Y+ + 
Sbjct: 240 LEEAKERDHRKLGKELKLFTNSQKVGQGLPLWLPKGATIRRIIERYIVDKEASLGYDHVY 299

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP +  + L++ SGHW+ YR  MF     D+         L+PMNCP H+ V+ + + SY
Sbjct: 300 TPVLGSRELYETSGHWNHYRDGMFPSMEMDN-----EELVLRPMNCPHHMMVYKNDIHSY 354

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+  E  ++ NL + +Y
Sbjct: 355 RELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVY 414

Query: 416 KDFGFEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
           KDFG E    +LS R      K    D +W+ A+ ++K  +D +       ++     GE
Sbjct: 415 KDFGLENYSFRLSYRDPADTKKYYADDEMWEKAQGMLKEAMDEMG------LDYYEAEGE 468

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
            AFYGPK +  ++ A+G+D    T+Q+DF LP RF   YV    ++  PV+IHR V  ++
Sbjct: 469 AAFYGPKLDVQVRTALGKDETLSTVQLDFLLPERFELTYVGEDGKQHRPVVIHRGVVSTM 528

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNET 590
           ERF+  +IE +KG  P WL+P+Q  V  ++    ++YA+++ + L+   + +E D R E 
Sbjct: 529 ERFVAFLIEEYKGAFPTWLAPVQVQVIPVSPQVHLDYAKKVQDELRRAGIRVELDTREEK 588

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           I YKIRE  ++KIP +++ GD E +E  + +R++G   ++ ++L   + ++  E
Sbjct: 589 IGYKIREAQMQKIPYMLVVGDNEVTENGVNVRKYGEQKSETIALDAFVDMIKVE 642


>gi|320173198|gb|EFW48409.1| Threonyl-tRNA synthetase [Shigella dysenteriae CDC 74-1112]
 gi|320185858|gb|EFW60609.1| Threonyl-tRNA synthetase [Shigella flexneri CDC 796-83]
 gi|332096305|gb|EGJ01306.1| threonyl-tRNA synthetase [Shigella boydii 3594-74]
          Length = 622

 Score =  651 bits (1678), Expect = 0.0,   Method: Composition-based stats.
 Identities = 294/632 (46%), Positives = 420/632 (66%), Gaps = 16/632 (2%)

Query: 24  SDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMA 82
            DVA  I   LAK  +A  +NG++ D  D +  +  + IIT +D   L +IRHSCAH++ 
Sbjct: 1   MDVALDIGPGLAKACIAGRVNGELVDACDLIENDAQLSIITAKDEEGLEIIRHSCAHLLG 60

Query: 83  EAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLS 142
            A++ +WP  ++AIGP+I++GFYYD D ++  + +++  +EK+M E+  ++   +K+ +S
Sbjct: 61  HAIKQLWPHTKMAIGPVIDNGFYYDVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVS 120

Query: 143 HEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLM 201
              ARE F ++ E+YKV IL E+I   +   LY   E+ D+CRGPHV +      F KLM
Sbjct: 121 WHAARETFANRGESYKVSILDENIAHDDKPGLYFHEEYVDMCRGPHVPNMRFCHHF-KLM 179

Query: 202 KVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED 261
           K AGAYWRGDSN  ML RIYGTAW  ++ L  YL  LEE+ KRDHRK+ +++DL+H+ E+
Sbjct: 180 KTAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEE 239

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
             G++FWH  GW IF+ L  ++R K+K+  Y+E+  P ++D+ LW+++GHWD+Y+  MF 
Sbjct: 240 APGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFT 299

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
                 T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+AEFGS +RNEPSGSLHGL
Sbjct: 300 ------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGL 353

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           MRVRGFTQDDAH+FCT+EQ+ +E      L+  +Y  FGFEKI+VKLSTRPEKR+GSD +
Sbjct: 354 MRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEKIVVKLSTRPEKRIGSDEM 413

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDF 500
           WD AE  +   L+      ++ I     LGEGAFYGPK E+ L D + R WQCGT+Q+DF
Sbjct: 414 WDRAEADLAVALE------ENNIPFEYQLGEGAFYGPKIEFTLYDCLDRAWQCGTVQLDF 467

Query: 501 NLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTI 560
           +LPSR +A YV   +E+  PVMIHRA+ GS+ERFIGI+ E F G  P WL+P+Q ++  I
Sbjct: 468 SLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVIMNI 527

Query: 561 TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
           T S  EY  E+   L +  + ++ D RNE I +KIREH+++++P +++CGDKE     + 
Sbjct: 528 TDSQSEYVNELTQKLSNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVA 587

Query: 621 IRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           +R         + + + I  L +E      ++
Sbjct: 588 VRTRRGKDLGSMDVNEVIEKLQQEIRSRSLKQ 619


>gi|325569916|ref|ZP_08145910.1| threonine--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
 gi|325157039|gb|EGC69207.1| threonine--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
          Length = 646

 Score =  651 bits (1678), Expect = 0.0,   Method: Composition-based stats.
 Identities = 256/648 (39%), Positives = 403/648 (62%), Gaps = 23/648 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +TFPDG+ K F V  T  ++AESIS+SLAKKA+A  +NG++ DLS P+  + +IEI+TP+
Sbjct: 5   ITFPDGAKKEFAVGVTTKEIAESISKSLAKKALAGKVNGQLIDLSRPIEEDATIEIVTPD 64

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQIEK 124
              +L ++RHS AH+MA+A++ ++P +   +GP I+ GFYYD D  E P ++++L  IE 
Sbjct: 65  HEDALGLLRHSTAHLMAQAMRRLYPSIHFGVGPAIDSGFYYDTDNGENPVTAEDLPAIEA 124

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
           +M +II  + P  ++ L+ E+A  LF    + YKVE++  +P  E +T Y+QGE+ DLCR
Sbjct: 125 EMMKIIKENLPIERRVLTKEEALALFAE--DPYKVELITELPDDETITAYQQGEFVDLCR 182

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV STG++ + +KL+ VAGAYWRG S+  M+ R+YGTA+  +++L +++   EE+++R
Sbjct: 183 GPHVPSTGRI-QVYKLLSVAGAYWRGSSDNQMMQRVYGTAFFDKKDLKEFIRLREEAKER 241

Query: 245 DHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQ 302
           DHRKL +E++LF ++ +   G+ FW  KG  I +T+  Y+  +++   Y+ + TP + + 
Sbjct: 242 DHRKLGKELELFMLSPEVGAGLPFWLPKGATIRRTIERYIVDKEVSLGYQHVYTPIMANV 301

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            L++ SGHWD Y  +MF          D     L+PMNCP H+ V+ + + SYRELP+R+
Sbjct: 302 DLYKTSGHWDHYHEDMFPPMDMG----DGEMLVLRPMNCPHHMMVYKNDIHSYRELPIRI 357

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AE G ++R E SG+L GL RVR  T +D H F   +Q+  E  +  +L++ +Y+DF    
Sbjct: 358 AELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKEEFKRTLDLMVGVYEDFNITD 417

Query: 423 IMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
              +LS R  +        DA+W++A+ ++K  +D ++      ++     GE AFYGPK
Sbjct: 418 YRFRLSYRDPQNKDKYFDDDAMWENAQTMLKAAMDELE------LDYFEADGEAAFYGPK 471

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK-CHPVMIHRAVFGSIERFIGI 537
            +  +K A+G +    TIQ+DF LP RF+  YV    E    PV+IHR +  ++ERF+  
Sbjct: 472 LDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENNHRPVVIHRGIVSTMERFVAY 531

Query: 538 MIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           + E +KG  P WL+PIQA +  ++  +  +YA EI   L++  L +E D RNE + YKIR
Sbjct: 532 LTEVYKGAFPTWLAPIQASIIPVSVEAHSDYAYEIKERLQAQGLRVEVDDRNEKMGYKIR 591

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
               +KIP  I+ GD+E ++ ++ IRR+GS  TQ   L   +  +  E
Sbjct: 592 ASQTQKIPYQIVVGDQEVNDATVNIRRYGSKETQVEELNLFVDAMAAE 639


>gi|195937403|ref|ZP_03082785.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4024]
 gi|261227789|ref|ZP_05942070.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK2000]
 gi|261258046|ref|ZP_05950579.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK966]
 gi|320641567|gb|EFX10955.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. G5101]
 gi|320646926|gb|EFX15759.1| threonyl-tRNA synthetase [Escherichia coli O157:H- str. 493-89]
 gi|320668281|gb|EFX35108.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. LSU-61]
          Length = 622

 Score =  651 bits (1678), Expect = 0.0,   Method: Composition-based stats.
 Identities = 295/632 (46%), Positives = 421/632 (66%), Gaps = 16/632 (2%)

Query: 24  SDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMA 82
            DVA  I   LAK  +A  +NG++ D  D +  +  + IIT +D   L +IRHSCAH++ 
Sbjct: 1   MDVALDIGPGLAKACIAGRVNGELVDACDLIENDAQLSIITAKDEEGLEIIRHSCAHLLG 60

Query: 83  EAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLS 142
            A++ +WP  ++AIGP+I++GFYYD D ++  + +++  +EK+M E+  ++   +K+ +S
Sbjct: 61  HAIKQLWPHTKMAIGPVIDNGFYYDVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVS 120

Query: 143 HEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLM 201
             +ARE F ++ E+YKV IL E+I   +   LY   E+ D+CRGPHV +      F KLM
Sbjct: 121 WHEARETFANRGESYKVSILDENIAHDDKPGLYFHEEYVDMCRGPHVPNMRFCHHF-KLM 179

Query: 202 KVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED 261
           K AGAYWRGDSN  ML RIYGTAW  ++ L  YL  LEE+ KRDHRK+ +++DL+H+ E+
Sbjct: 180 KTAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEE 239

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
             G++FWH  GW IF+ L  ++R K+K+  Y+E+  P ++D+ LW+++GHWD+Y+  MF 
Sbjct: 240 APGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFT 299

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
                 T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+AEFGS +RNEPSGSLHGL
Sbjct: 300 ------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGL 353

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           MRVRGFTQDDAH+FCT+EQ+ +E      L+  +Y  FGFEKI+VKLSTRPEKR+GSD +
Sbjct: 354 MRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEKIVVKLSTRPEKRIGSDEM 413

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDF 500
           WD AE  +   L+      ++ I     LGEGAFYGPK E+ L D + R WQCGT+Q+DF
Sbjct: 414 WDRAEADLAVALE------ENNIPFEYQLGEGAFYGPKIEFTLYDCLDRAWQCGTVQLDF 467

Query: 501 NLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTI 560
           +LPSR +A YV   +E+  PVMIHRA+ GS+ERFIGI+ E F G  P WL+P+Q ++  I
Sbjct: 468 SLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVIMNI 527

Query: 561 TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
           T S  EY  E+   L +  + ++ D RNE I +KIREH+++++P +++CGDKE     I 
Sbjct: 528 TDSQSEYVNELTQKLSNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKIA 587

Query: 621 IRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           +R         + + + I  L +E      ++
Sbjct: 588 VRTRRGKDLGSMDVNEVIEKLQQEIRSRSLKQ 619


>gi|314936214|ref|ZP_07843561.1| threonine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
 gi|313654833|gb|EFS18578.1| threonine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
          Length = 645

 Score =  651 bits (1678), Expect = 0.0,   Method: Composition-based stats.
 Identities = 260/650 (40%), Positives = 406/650 (62%), Gaps = 21/650 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
             I + FPDG+ K+F    T  D+A+SIS  L KKAVA   N ++ DL+ P+  +G+IEI
Sbjct: 2   EQINIKFPDGNSKSFDKGTTTEDIAQSISPGLRKKAVAGKFNNQLVDLTRPLEEDGAIEI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +TP    +L V+RHS AH+MA+A++ I+ +V+  +GP+IE GFYYDFD ++  SSD+  +
Sbjct: 62  VTPGSDEALEVLRHSTAHLMAQALKRIYGDVKFGVGPVIEGGFYYDFDMDEKVSSDDFEK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK M++I+  +    ++ +S E+A++ F+   + YK+E++++IP  ENVTLY QGE+ D
Sbjct: 122 IEKTMKQIVNENYKIERKVVSREEAKDFFK--DDPYKLELIDAIPEDENVTLYTQGEFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG HV ST ++K+F KL+  AGAYWRGDS+  ML RIYGTA+  +++L  +L  LEE 
Sbjct: 180 LCRGVHVPSTSKIKEF-KLLSTAGAYWRGDSDNKMLQRIYGTAFFDKKDLKAHLDMLEER 238

Query: 242 EKRDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
            +RDHR++ ++++LF +    G+G+  W   G  I + +  Y+  +++   Y+ + TP +
Sbjct: 239 RERDHRRIGKDLELFTNNQLVGAGLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVL 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +  L++ SGHWD YR +MF     D+T        L+PMNCP H+ V+N+   SYRELP
Sbjct: 299 ANVELYKTSGHWDHYRDDMFPPMKLDET----EEMVLRPMNCPHHMMVYNNKPHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G+++R E SG++ GL RVRG T +D+H+F   +Q+ +E  ++ ++I  +Y+DFG
Sbjct: 355 IRIAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKDEFKRVVHMIQDVYEDFG 414

Query: 420 FEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           FE    +LS R      K +  D +W+ AE+++K  +D +       +     +GE AFY
Sbjct: 415 FEDYTFRLSYRDPEDKEKYMDDDDMWNKAESMLKEAVDEMG------LPYVEAIGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G++    T Q+DF LP RF+  Y+ S  E   PV+IHR V  ++ERF+
Sbjct: 469 GPKLDVQVKTAMGKEETLSTAQLDFLLPERFDLSYIGSDGENHRPVVIHRGVVSTMERFV 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             + E  KG  P WL+P Q  +  +      +YA+ + + LKS  + +E D RNE + YK
Sbjct: 529 AFLTEETKGAFPTWLAPKQVEIIPVNVDLHYDYARNLQDELKSQGVRVEIDDRNEKMGYK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IRE  ++KIP  I+ GDKE     + +R++GS   + +   + I  L  E
Sbjct: 589 IREAQMQKIPYQIVVGDKEVENNEVNVRKYGSQDQETIERDEFIWNLVDE 638


>gi|217962055|ref|YP_002340625.1| threonyl-tRNA synthetase [Bacillus cereus AH187]
 gi|222098038|ref|YP_002532095.1| threonyl-tRNA synthetase [Bacillus cereus Q1]
 gi|229141301|ref|ZP_04269839.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
 gi|217064460|gb|ACJ78710.1| threonyl-tRNA synthetase [Bacillus cereus AH187]
 gi|221242096|gb|ACM14806.1| threonyl-tRNA synthetase [Bacillus cereus Q1]
 gi|228642082|gb|EEK98375.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
          Length = 645

 Score =  650 bits (1677), Expect = 0.0,   Method: Composition-based stats.
 Identities = 250/654 (38%), Positives = 404/654 (61%), Gaps = 22/654 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           M   +K+TFPDG++K FP   T  ++A SIS  L KKAVA  +N ++ DL  P+  +G++
Sbjct: 1   MADVVKITFPDGAVKEFPKGVTTEEIAASISPGLKKKAVAGKLNDEMIDLVTPIEEDGAV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQ--VAIGPIIEDGFYYDFDKEQPFSSD 117
            IIT +    L ++RHS AH++A+A++ ++ +V+  + IGP+IE+GFYYD D E+  + +
Sbjct: 61  SIITLDSEDGLYILRHSTAHLLAQALKRLYKDVKVELGIGPVIENGFYYDIDMEEAITVE 120

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +  +IEK+MQ+I+  +   ++  +   +A   FE   +  K++++  +P    +++Y QG
Sbjct: 121 DFKKIEKEMQKIVNENLEIVRHEVPRAEAIRRFEEIGDELKLDLINDLPEDAVISIYEQG 180

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           E+FDLCRG H+ STG++K F KL+ VAGAYWRGDSN  ML RIYGTA+  + EL ++L  
Sbjct: 181 EFFDLCRGVHLPSTGKIKVF-KLLSVAGAYWRGDSNNKMLQRIYGTAFVKKAELDEHLRM 239

Query: 238 LEESEKRDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEIN 295
           LEE+++RDHRKL +E+ LF +  + G G+  W  KG  I + +  Y+  ++    Y+ + 
Sbjct: 240 LEEAKERDHRKLGKELKLFTNSQKVGQGLPLWLPKGATIRRIIERYIVDKEASLGYDHVY 299

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP +  + L++ SGHW+ YR  MF     D+         L+PMNCP H+ V+ + + SY
Sbjct: 300 TPVLGSRELYETSGHWNHYRDGMFPSMEMDN-----EELVLRPMNCPHHMMVYKNDIHSY 354

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+  E  ++ NL + +Y
Sbjct: 355 RELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVY 414

Query: 416 KDFGFEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
           KDFG E    +LS R      K    D +W+ A+ ++K  +D +       ++     GE
Sbjct: 415 KDFGLENYSFRLSYRDPADTKKYYADDEMWEKAQGMLKEAMDEMG------LDYYEAEGE 468

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
            AFYGPK +  ++ A+G+D    T+Q+DF LP RF   YV    ++  PV+IHR V  ++
Sbjct: 469 AAFYGPKLDVQVRTALGKDETLSTVQLDFLLPERFELSYVGEDGKQHRPVVIHRGVVSTM 528

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNET 590
           ERF+  +IE +KG  P WL+P+Q  V  ++    ++YA+++ + L+   + +E D R E 
Sbjct: 529 ERFVAFLIEEYKGAFPTWLAPVQVQVIPVSPQVHLDYAKKVQDELRRAGMRVELDTREEK 588

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           I YKIRE  ++KIP +++ GD E +E  + +R++G   ++ ++L   + ++  E
Sbjct: 589 IGYKIREAQMQKIPYMLVVGDNEVTENGVNVRKYGEQKSETIALDAFVDMIKVE 642


>gi|163942310|ref|YP_001647194.1| threonyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|229013779|ref|ZP_04170907.1| Threonyl-tRNA synthetase [Bacillus mycoides DSM 2048]
 gi|229062260|ref|ZP_04199581.1| Threonyl-tRNA synthetase [Bacillus cereus AH603]
 gi|229135411|ref|ZP_04264199.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
 gi|163864507|gb|ABY45566.1| threonyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|228648054|gb|EEL04101.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
 gi|228716988|gb|EEL68669.1| Threonyl-tRNA synthetase [Bacillus cereus AH603]
 gi|228747448|gb|EEL97323.1| Threonyl-tRNA synthetase [Bacillus mycoides DSM 2048]
          Length = 645

 Score =  650 bits (1677), Expect = 0.0,   Method: Composition-based stats.
 Identities = 250/654 (38%), Positives = 404/654 (61%), Gaps = 22/654 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           M   +K+TFPDG++K FP   T  ++A SIS  L KKAVA  +N ++ DL  P+  +G++
Sbjct: 1   MADVVKITFPDGAVKEFPKGVTTEEIAASISPGLKKKAVAGKLNDEMIDLVTPIEEDGAV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV--AIGPIIEDGFYYDFDKEQPFSSD 117
            IIT +    L ++RHS AH++A+A++ ++ +V++   IGP+IE+GFYYD D E+  + +
Sbjct: 61  SIITLDSEDGLYILRHSTAHLLAQALKRLYKDVKLELGIGPVIENGFYYDIDMEEAITVE 120

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +  +IEK+MQ+I+  +   ++  +   +A   FE   +  K++++  +P    +++Y QG
Sbjct: 121 DFKKIEKEMQKIVNENLEIVRHEVPRAEALRRFEEIGDELKLDLINDLPEDAVISIYEQG 180

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           E+FDLCRG H+ STG++K F KL+ VAGAYWRGDSN  ML RIYGT +  + EL ++L  
Sbjct: 181 EFFDLCRGVHLPSTGKIKVF-KLLSVAGAYWRGDSNNKMLQRIYGTGFVKKAELDEHLRM 239

Query: 238 LEESEKRDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEIN 295
           LEE+++RDHRKL +E+ LF +  + G G+  W  KG  I + +  Y+  ++    Y+ + 
Sbjct: 240 LEEAKERDHRKLGKELKLFTNSQKVGQGLPLWLPKGATIRRIIERYIVDKEASLGYDHVY 299

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP +  + L++ SGHW+ YR  MF     D+         L+PMNCP H+ V+ + + SY
Sbjct: 300 TPVLGSRELYETSGHWNHYRDGMFPSMEMDN-----EELVLRPMNCPHHMMVYKNDIHSY 354

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+  E  ++ NL + +Y
Sbjct: 355 RELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVY 414

Query: 416 KDFGFEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
           KDFG E    +LS R      K    D +W+ A+ ++K  +D +       ++     GE
Sbjct: 415 KDFGLENYSFRLSYRDPADTKKYYADDEMWEKAQGMLKEAMDEMG------LDYYEAEGE 468

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
            AFYGPK +  ++ A+G+D    T+Q+DF LP RF   YV    ++  PV+IHR V  ++
Sbjct: 469 AAFYGPKLDVQVRTALGKDETLSTVQLDFLLPERFELTYVGEDGKQHRPVVIHRGVVSTM 528

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNET 590
           ERF+  +IE +KG  P WL+P+QA V  ++    ++YA+++ + L+   + +E D R E 
Sbjct: 529 ERFVAFLIEEYKGAFPTWLAPVQAQVIPVSPQVHLDYAKKVQDELRRAGIRVELDTREEK 588

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           I YKIRE  ++KIP +++ GD E +E  + +R++G   ++ ++L   + ++  E
Sbjct: 589 IGYKIREAQMQKIPYMLVVGDNEVTENGVNVRKYGEQKSETIALDAFVDMIKVE 642


>gi|195978510|ref|YP_002123754.1| threonyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
 gi|195975215|gb|ACG62741.1| threonyl-tRNA synthetase ThrS [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
          Length = 655

 Score =  650 bits (1677), Expect = 0.0,   Method: Composition-based stats.
 Identities = 261/651 (40%), Positives = 405/651 (62%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            I +TFPDG+++ F    T  ++A+SIS+SLAKKA+A   NG++ D +  +  +GSIEII
Sbjct: 8   MITITFPDGAVREFESGVTTFEIADSISKSLAKKALAGKFNGQLIDTTRAIEEDGSIEII 67

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQ 121
           T +   +  V+RHS AH+ A+A + ++P++ + +GP I DGFYYD D  +   S+++L +
Sbjct: 68  TADHEDAFEVLRHSAAHLFAQAAKRLFPKLHLGVGPAIADGFYYDTDNADGQISNEDLPR 127

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKE-NVTLYRQGEWF 180
           IE++M++I+  + P +++ ++ E+A ELF+   + YKVE++         +T+YRQGE+ 
Sbjct: 128 IEEEMKKIVKENFPCIREEITKEEALELFK--DDPYKVELINEHADDAAGLTVYRQGEFV 185

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ R+YGTAW  +++L  YL  LEE
Sbjct: 186 DLCRGPHVPSTGRIQVFHLL-NVAGAYWRGNSDNSMMQRVYGTAWFDKKDLKAYLTRLEE 244

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           +++RDHRKL +E+DLF ++++   G+ FW   G  I +TL  Y+  +++   Y+ + TP 
Sbjct: 245 AKERDHRKLGKELDLFMVSQEVGQGLPFWLPNGATIRRTLERYITDKELASGYQHVYTPP 304

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L++ SGHW+ Y+ +MF          D   F L+PMNCP H+ V+ + + SYREL
Sbjct: 305 LASVELYKTSGHWEHYQEDMFPTMDMG----DGEEFVLRPMNCPHHIQVYKNHVHSYREL 360

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  T +D H+F T EQ+  E  +   LII +Y+DF
Sbjct: 361 PIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHLFVTPEQIQEEFQRALQLIIDVYEDF 420

Query: 419 GFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
                  +LS R      K   +D +W++A++++K  LD +       ++     GE AF
Sbjct: 421 NLTDYRFRLSYRDPKDTHKYYDNDEMWENAQSMLKAALDEMG------VDYFEAEGEAAF 474

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K A+G +    TIQ+DF LP RFN  Y+ +  E+  PVMIHR V  ++ERF
Sbjct: 475 YGPKLDIQVKTALGNEETLSTIQLDFLLPERFNLSYIGADGEEHRPVMIHRGVISTMERF 534

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINY 593
             I+IE +KG  P WL+P Q  V  I++   ++YA E+A  L+ H +  + D RNE + Y
Sbjct: 535 TAILIETYKGAFPTWLAPRQVTVIPISNEAHIDYAWEVAKTLRDHGIRADVDDRNEKMQY 594

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR     KIP  +I GDKE  ++S+ +RR+GS  T   ++   +  +  +
Sbjct: 595 KIRASQTSKIPYQLIVGDKEMEDKSVNVRRYGSKATHTEAIAAFVDNILAD 645


>gi|42783753|ref|NP_981000.1| threonyl-tRNA synthetase [Bacillus cereus ATCC 10987]
 gi|206969938|ref|ZP_03230892.1| threonyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|218234238|ref|YP_002369371.1| threonyl-tRNA synthetase [Bacillus cereus B4264]
 gi|228923319|ref|ZP_04086607.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228954844|ref|ZP_04116864.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228960844|ref|ZP_04122479.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|229048283|ref|ZP_04193851.1| Threonyl-tRNA synthetase [Bacillus cereus AH676]
 gi|229072077|ref|ZP_04205286.1| Threonyl-tRNA synthetase [Bacillus cereus F65185]
 gi|229081828|ref|ZP_04214320.1| Threonyl-tRNA synthetase [Bacillus cereus Rock4-2]
 gi|229112040|ref|ZP_04241583.1| Threonyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|229129859|ref|ZP_04258825.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|229147134|ref|ZP_04275493.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|229152770|ref|ZP_04280953.1| Threonyl-tRNA synthetase [Bacillus cereus m1550]
 gi|229180894|ref|ZP_04308229.1| Threonyl-tRNA synthetase [Bacillus cereus 172560W]
 gi|229192776|ref|ZP_04319734.1| Threonyl-tRNA synthetase [Bacillus cereus ATCC 10876]
 gi|229198724|ref|ZP_04325422.1| Threonyl-tRNA synthetase [Bacillus cereus m1293]
 gi|296505048|ref|YP_003666748.1| threonyl-tRNA synthetase [Bacillus thuringiensis BMB171]
 gi|42739683|gb|AAS43608.1| threonyl-tRNA synthetase [Bacillus cereus ATCC 10987]
 gi|206735626|gb|EDZ52794.1| threonyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|218162195|gb|ACK62187.1| threonine--tRNA ligase [Bacillus cereus B4264]
 gi|228584746|gb|EEK42866.1| Threonyl-tRNA synthetase [Bacillus cereus m1293]
 gi|228590615|gb|EEK48476.1| Threonyl-tRNA synthetase [Bacillus cereus ATCC 10876]
 gi|228602451|gb|EEK59937.1| Threonyl-tRNA synthetase [Bacillus cereus 172560W]
 gi|228630590|gb|EEK87236.1| Threonyl-tRNA synthetase [Bacillus cereus m1550]
 gi|228636383|gb|EEK92854.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|228653550|gb|EEL09422.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|228671363|gb|EEL26664.1| Threonyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|228701416|gb|EEL53910.1| Threonyl-tRNA synthetase [Bacillus cereus Rock4-2]
 gi|228711011|gb|EEL62977.1| Threonyl-tRNA synthetase [Bacillus cereus F65185]
 gi|228723008|gb|EEL74385.1| Threonyl-tRNA synthetase [Bacillus cereus AH676]
 gi|228798866|gb|EEM45845.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228804833|gb|EEM51432.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228836273|gb|EEM81626.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|296326100|gb|ADH09028.1| threonyl-tRNA synthetase [Bacillus thuringiensis BMB171]
 gi|324328469|gb|ADY23729.1| threonyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 645

 Score =  650 bits (1677), Expect = 0.0,   Method: Composition-based stats.
 Identities = 250/654 (38%), Positives = 404/654 (61%), Gaps = 22/654 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           M   +K+TFPDG++K FP   T  ++A SIS  L KKAVA  +N ++ DL  P+  +G++
Sbjct: 1   MADVVKITFPDGAVKEFPKGVTTEEIAASISPGLKKKAVAGKLNDEMIDLVTPIEEDGAV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQ--VAIGPIIEDGFYYDFDKEQPFSSD 117
            IIT +    L ++RHS AH++A+A++ ++ +V+  + IGP+IE+GFYYD D E+  + +
Sbjct: 61  SIITLDSEDGLYILRHSTAHLLAQALKRLYKDVKVELGIGPVIENGFYYDIDMEEAITVE 120

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +  +IEK+MQ+I+  +   ++  +   +A   FE   +  K++++  +P    +++Y QG
Sbjct: 121 DFKKIEKEMQKIVNENLEIVRHEVPRAEAIRRFEEIGDELKLDLINDLPEDAVISIYEQG 180

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           E+FDLCRG H+ STG++K F KL+ VAGAYWRGDSN  ML RIYGTA+  + EL ++L  
Sbjct: 181 EFFDLCRGVHLPSTGKIKVF-KLLSVAGAYWRGDSNNKMLQRIYGTAFVKKAELDEHLRM 239

Query: 238 LEESEKRDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEIN 295
           LEE+++RDHRKL +E+ LF +  + G G+  W  KG  I + +  Y+  ++    Y+ + 
Sbjct: 240 LEEAKERDHRKLGKELKLFTNSQKVGQGLPLWLPKGATIRRIIERYIVDKEASLGYDHVY 299

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP +  + L++ SGHW+ YR  MF     D+         L+PMNCP H+ V+ + + SY
Sbjct: 300 TPVLGSRELYETSGHWNHYRDGMFPSMEMDN-----EELVLRPMNCPHHMMVYKNDIHSY 354

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+  E  ++ NL + +Y
Sbjct: 355 RELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVY 414

Query: 416 KDFGFEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
           KDFG E    +LS R      K    D +W+ A+ ++K  +D +       ++     GE
Sbjct: 415 KDFGLENYSFRLSYRDPADTKKYYADDEMWEKAQGMLKEAMDEMG------LDYYEAEGE 468

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
            AFYGPK +  ++ A+G+D    T+Q+DF LP RF   YV    ++  PV+IHR V  ++
Sbjct: 469 AAFYGPKLDVQVRTALGKDETLSTVQLDFLLPERFELSYVGEDGKQHRPVVIHRGVVSTM 528

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNET 590
           ERF+  +IE +KG  P WL+P+Q  V  ++    ++YA+++ + L+   + +E D R E 
Sbjct: 529 ERFVAFLIEEYKGAFPTWLAPVQVQVIPVSPQVHLDYAKKVQDELRRAGIRVELDTREEK 588

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           I YKIRE  ++KIP +++ GD E +E  + +R++G   ++ ++L   + ++  E
Sbjct: 589 IGYKIREAQMQKIPYMLVVGDNEVTENGVNVRKYGEQKSETIALDAFVDMIKVE 642


>gi|260891090|ref|ZP_05902353.1| threonine--tRNA ligase [Leptotrichia hofstadii F0254]
 gi|260859117|gb|EEX73617.1| threonine--tRNA ligase [Leptotrichia hofstadii F0254]
          Length = 636

 Score =  650 bits (1677), Expect = 0.0,   Method: Composition-based stats.
 Identities = 303/651 (46%), Positives = 431/651 (66%), Gaps = 18/651 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I++  PDGS +      T  + A+SI  SL K  V   I+G   D S  + + G+IEII
Sbjct: 1   MIEMILPDGSKRQLENPMTVVEFAKSIGSSLGKATVGAIIDGVQVDPSHIIDKSGTIEII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T    + + +IRHS AHIMA+AVQ ++P  +V IGP+IE+GF+YDFD E+PF+ ++LA+I
Sbjct: 61  TNTSEKGIEIIRHSAAHIMAQAVQRLFPNTKVTIGPVIENGFFYDFDPEKPFTEEDLAKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E++M +I+  +  F +  ++ E+A++ F  K E YKVEI+E + A   V++Y+QGE+ DL
Sbjct: 121 EEEMTKIVKENYEFKRSEMTAEEAKKFFAEKGETYKVEIIEDLGAD-KVSIYQQGEFIDL 179

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRG H+ STG +K F KLM  AGAYWRGDSN  ML RIYG A+ T++EL  YL  +EE+E
Sbjct: 180 CRGTHIPSTGYLKAF-KLMSTAGAYWRGDSNNKMLQRIYGVAFATKKELDDYLTMMEEAE 238

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLD 301
           KRDHRKL +++DLF + E G G  F+  KG ++F  L    R    K  Y+EI TP +LD
Sbjct: 239 KRDHRKLGKQLDLFFVDEHGPGFPFFMPKGVELFNKLQEIWRVEHKKRGYQEIKTPIMLD 298

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW +YR NM+       +  D + +A+KPMNCPG +  + + L SY++LP++
Sbjct: 299 KELWEISGHWFNYRENMYT------STIDEKEYAIKPMNCPGSIIAYKNNLHSYKDLPLK 352

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
             E G V+R+E SG+LHGLMRVR FTQDDAHVFCTKEQ+  + ++I +L    Y  FGFE
Sbjct: 353 YGEMGLVHRHEFSGALHGLMRVRAFTQDDAHVFCTKEQIEEQIIEIIDLYDKFYTVFGFE 412

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
             + +LST+P+K +GSD +W+ AE  +K  L+         IN  +  G+GAFYGPK ++
Sbjct: 413 YHI-ELSTKPDKAIGSDEIWEMAEANLKSALEH------KGINYKLNPGDGAFYGPKIDF 465

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KD+IGR WQCGTIQ+DFNLP+RF   Y+ +  EK  PVMIHRA++GS+ERFIGI+IE+
Sbjct: 466 KMKDSIGRIWQCGTIQLDFNLPARFEMSYIGADGEKHEPVMIHRAMYGSLERFIGILIEH 525

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH-SI 600
           + G  P WL+P+QA + TI+   V +A+E+   L+   + +E D R E I YKIRE    
Sbjct: 526 YAGAFPTWLAPVQARILTISDEQVPFAKELFTKLQDAGIRVELDTRVEKIGYKIREANGD 585

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           +KIP+ +I G  E +   + +RRFGS  ++ +S+ + I  L +ES  P  +
Sbjct: 586 QKIPVQLIIGKNEVANNEVNVRRFGSQDSKNISVDEIIKTLKQESFVPFSK 636


>gi|229175285|ref|ZP_04302800.1| Threonyl-tRNA synthetase [Bacillus cereus MM3]
 gi|228608117|gb|EEK65424.1| Threonyl-tRNA synthetase [Bacillus cereus MM3]
          Length = 645

 Score =  650 bits (1677), Expect = 0.0,   Method: Composition-based stats.
 Identities = 250/654 (38%), Positives = 404/654 (61%), Gaps = 22/654 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           M   +K+TFPDG++K FP   T  ++A SIS  L KKAVA  +N ++ DL  P+  +G++
Sbjct: 1   MADVVKITFPDGAVKEFPKGVTTEEIAASISPGLKKKAVAGKLNDEMIDLVTPIEEDGAV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV--AIGPIIEDGFYYDFDKEQPFSSD 117
            IIT +    L ++RHS AH++A+A++ ++ + ++   IGP+IE+GFYYD D E+  + +
Sbjct: 61  SIITLDSEDGLYILRHSTAHLLAQALKRLYKDAKLELGIGPVIENGFYYDIDMEEAITVE 120

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +  +IEK+MQ+I+  +   ++  +   +A   FE   +  K++++  +P    +++Y QG
Sbjct: 121 DFKKIEKEMQKIVNENLEIVRHEVPRAEALRRFEEIGDELKLDLINDLPEDAVISIYEQG 180

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           E+FDLCRG H+ STG++K F KL+ VAGAYWRGDSN  ML RIYGTA+  + EL ++L  
Sbjct: 181 EFFDLCRGVHLPSTGKIKVF-KLLSVAGAYWRGDSNNKMLQRIYGTAFVKKAELDEHLRM 239

Query: 238 LEESEKRDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEIN 295
           LEE+++RDHRKL +E+ LF +  + G G+  W  KG  I + +  Y+  ++    Y+ + 
Sbjct: 240 LEEAKERDHRKLGKELKLFTNSQKVGQGLPLWLPKGATIRRIIERYIVDKEASLGYDHVY 299

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP +  + L++ SGHW+ YR  MF     D+         L+PMNCP H+ V+ + + SY
Sbjct: 300 TPVLGSRELYETSGHWNHYRDGMFPSMEMDN-----EELVLRPMNCPHHMMVYKNDIHSY 354

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+  E  ++ NL + +Y
Sbjct: 355 RELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVY 414

Query: 416 KDFGFEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
           KDFG E    +LS R      K    D +W+ A+ ++K  +D +       ++     GE
Sbjct: 415 KDFGLENYSFRLSYRDPADTKKYYADDEMWEKAQGMLKEAMDEMG------LDYYEAEGE 468

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
            AFYGPK +  ++ A+G+D    T+Q+DF LP RF   YV    ++  PV+IHR V  ++
Sbjct: 469 AAFYGPKLDVQVRTALGKDETLSTVQLDFLLPERFELSYVGEDGKQHRPVVIHRGVVSTM 528

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNET 590
           ERF+  +IE +KG  P WL+P+QA V  ++    ++YA+++ + L+   + +E D R E 
Sbjct: 529 ERFVAFLIEEYKGAFPTWLAPVQAQVIPVSPQVHLDYAKKVQDELRRAGIRVELDTREEK 588

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           I YKIRE  ++KIP +++ GD E +E  + +R++G   ++ ++L   + ++  E
Sbjct: 589 IGYKIREAQMQKIPYMLVVGDNEVTENGVNVRKYGEQKSETIALDAFVDMIKVE 642


>gi|290580052|ref|YP_003484444.1| putative threonyl-tRNA synthetase [Streptococcus mutans NN2025]
 gi|254996951|dbj|BAH87552.1| putative threonyl-tRNA synthetase [Streptococcus mutans NN2025]
          Length = 649

 Score =  650 bits (1676), Expect = 0.0,   Method: Composition-based stats.
 Identities = 262/659 (39%), Positives = 410/659 (62%), Gaps = 28/659 (4%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+TFPDG+++ F    T  ++AESIS+SLAKKA+A   NG++ D    + ++GSIEI+
Sbjct: 1   MIKITFPDGAVREFEAGVTTFEIAESISKSLAKKALAGKFNGQLIDTIRAITQDGSIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQ 121
           TP+   +L ++RHS AH+ A+A + ++P++ + +GP I+DGFYYD D E    S+++L +
Sbjct: 61  TPDHEDALDILRHSAAHLFAQAARRLFPDIHLGVGPAIQDGFYYDTDNEAGQISNEDLPR 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-ENVTLYRQGEWF 180
           IE++M++I+  + P +++ ++ ++ARE+F+   + YK+E++E        +T+YRQGE+ 
Sbjct: 121 IEEEMKKIVKENFPSVREEVTKDEAREIFK--NDPYKLELIEEHSEDAGGLTIYRQGEYV 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV STG+++ F  L  VAGAYWRGDSN  M+ RIYGTAW  +++L +YL   EE
Sbjct: 179 DLCRGPHVPSTGRIQVFHLL-NVAGAYWRGDSNNAMMQRIYGTAWFDKKDLKKYLQMREE 237

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           +++RDHRKL +E+DLF I+++   G+ FW   G  I + +  Y+  +++   Y+ + TP 
Sbjct: 238 AKERDHRKLGKELDLFMISQEVGQGLPFWLPDGATIRRIIERYITDKEVASGYQHVYTPP 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L++ SGHWD YR +MF          D  +F L+PMNCP H+ V+ + + SYREL
Sbjct: 298 IASVDLYKTSGHWDHYREDMFPTMDMG----DGESFVLRPMNCPHHIEVYKNHVHSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  +   LII +Y+DF
Sbjct: 354 PIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQVEDEFKRTLQLIIDVYEDF 413

Query: 419 GFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
                  +LS R      K    D +W+ ++ ++K  +D +       ++     GE AF
Sbjct: 414 NLTDYSFRLSYRDPNDTHKYFDDDEMWEKSQTMLKAAMDDMG------LDYYEAEGEAAF 467

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K A+G D    TIQ+DF LP RF   Y+ +  E+  PVMIHR +  ++ERF
Sbjct: 468 YGPKLDIQVKTALGNDETLSTIQLDFLLPERFELTYIGADGEEHRPVMIHRGIVSTMERF 527

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINY 593
              +IE +KG  P WL+P Q  V  I++   ++YA E+A  L+ H +  + D RNE + Y
Sbjct: 528 TAYLIETYKGAFPTWLAPHQVTVIPISNEAHIDYAWEVAKELRDHGIRADVDDRNEKMQY 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           KIR+   KK+P  +I GDKE    ++ +RR+GS  T   S+ +      +E++  D ++
Sbjct: 588 KIRQSQTKKVPYQLIVGDKEVESGTVNVRRYGSKQTHTESIAEF-----RENILADIKR 641


>gi|329115958|ref|ZP_08244675.1| threonine--tRNA ligase [Streptococcus parauberis NCFD 2020]
 gi|326906363|gb|EGE53277.1| threonine--tRNA ligase [Streptococcus parauberis NCFD 2020]
          Length = 648

 Score =  650 bits (1676), Expect = 0.0,   Method: Composition-based stats.
 Identities = 259/651 (39%), Positives = 406/651 (62%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK++FPDG+++ F    T  ++A+SIS SLAKKA+A   NG++ D   P+  +GSIEI+
Sbjct: 1   MIKISFPDGAVREFETGVTTFEIAQSISNSLAKKALAGKFNGQLIDTVRPITEDGSIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQ 121
           TP+   + +V+RHS AH+ A+A + ++PE+ + +GP I +GFYYD D +    S+++L +
Sbjct: 61  TPDHEDAFSVLRHSAAHLFAQAAKRLFPEIHLGVGPAITEGFYYDTDNQAGQISNEDLPR 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKE-NVTLYRQGEWF 180
           IE++M++I+  + P +++ +S ++A ++F+   + YKVE++         +T+YRQGE+ 
Sbjct: 121 IEEEMKKIVKENFPCIREEVSKDEALDIFK--DDPYKVELISEHADDAAGLTIYRQGEFV 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ R+YGTAW  +++L  YL  LEE
Sbjct: 179 DLCRGPHVPSTGRIQVFHLL-NVAGAYWRGNSDNAMMQRVYGTAWFDKKDLKAYLTRLEE 237

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           +++RDHRKL +E+DLF I+++   G+ FW   G  I +TL  Y+  +++   Y+ + TP 
Sbjct: 238 AKERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRTLERYITDKELASGYQHVYTPP 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L++ SGHW+ Y+ +MF          D   F L+PMNCP H+ V+ + + SYREL
Sbjct: 298 MASVELYKTSGHWEHYQEDMFPTMDMG----DGEEFVLRPMNCPHHIQVYKNHVHSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  T +D H+F T EQ+  E  +   LII +Y+DF
Sbjct: 354 PIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHLFVTPEQIQEEFQRALQLIIDVYEDF 413

Query: 419 GFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
                  +LS R      K   +D +W++A+ ++K  LD +       ++     GE AF
Sbjct: 414 NLTDYRFRLSYRDPKDTHKYYDNDEMWENAQAMLKAALDEMG------VDYFEAEGEAAF 467

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K A+G +    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF
Sbjct: 468 YGPKLDIQVKTALGNEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMIHRGVISTMERF 527

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINY 593
             I+IE +KG  P WL+P Q  V  I++   ++YA E+A  L+   +  + D RNE + Y
Sbjct: 528 TAILIETYKGAFPTWLAPHQVTVIPISNEAHIDYAWEVAKTLRDRGIRADVDDRNEKMQY 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR     KIP  +I GDKE  ++++ +RR+GS  T   S+ + +  +  +
Sbjct: 588 KIRASQTSKIPYQLIVGDKEMEDKAVNVRRYGSKATHTESIEEFVDNILAD 638


>gi|253583464|ref|ZP_04860662.1| threonine-tRNA ligase [Fusobacterium varium ATCC 27725]
 gi|251834036|gb|EES62599.1| threonine-tRNA ligase [Fusobacterium varium ATCC 27725]
          Length = 637

 Score =  650 bits (1676), Expect = 0.0,   Method: Composition-based stats.
 Identities = 300/644 (46%), Positives = 413/644 (64%), Gaps = 16/644 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K+  P G IK F   A   ++A+SIS SLAKKAVAV I+G   D++  + R+  +E I 
Sbjct: 1   MKVELPSGDIKEFEGQANMFEIAKSISNSLAKKAVAVKIDGVPMDMATILDRDAKVEFIP 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +      +IRHS AH+MA+AV  ++P  +VAIGP IE+GFYYDFD ++ F+ ++LA+IE
Sbjct: 61  ADSEEGEEIIRHSTAHLMAQAVIRLFPGTKVAIGPAIENGFYYDFDPKEQFTEEDLAKIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M++I+  +    +  ++ E+A E FE   E YKVEI++ I   E ++ Y+QGE+ DLC
Sbjct: 121 AEMKKIVKENEKIERVMMTREEAIEHFEKLGEIYKVEIIKEIAQGEMLSFYKQGEFMDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV ST  +K F KL  VAGAYWRGDSN  ML RIYG A++ + +L  YL  LEE+E+
Sbjct: 181 RGPHVPSTSYLKAF-KLKSVAGAYWRGDSNNKMLQRIYGFAFSDEAKLKAYLTLLEEAER 239

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQ 302
           RDHRKL +E+DLF ++E G G   +  KG  I  TLI   RR+     Y+EI TP +L++
Sbjct: 240 RDHRKLGKELDLFFVSEYGPGFPIFLPKGMVIRNTLIDLWRREHTLAGYQEITTPIMLNK 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW +YR NM+       +  D   FA+KPMNCPG +  + + L SY++ P+R 
Sbjct: 300 ELWEISGHWFNYRENMYT------STIDDTEFAIKPMNCPGGILAYKYQLHSYKDFPIRC 353

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            E G+V+R+E SG+LHGLMRVR FTQDDAH+F T +Q+  E + +  LI   Y      +
Sbjct: 354 GELGTVHRHEFSGALHGLMRVRSFTQDDAHIFMTPDQIEEEIIGVVELIDKFYSKLFGFE 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             ++LST+PEK +GS+ +W+ AE  + G LD I           +  G+GAFYGPK ++ 
Sbjct: 414 YHIELSTKPEKAIGSNEIWEKAEAALAGALDKIGKP------YKLNPGDGAFYGPKLDFK 467

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDAIGR WQCGTIQ+DFNLP RF+  Y+    EK  PVMIHR V+GSIERFIGI+IE+F
Sbjct: 468 IKDAIGRTWQCGTIQLDFNLPERFDISYIGEDGEKHRPVMIHRVVYGSIERFIGILIEHF 527

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH-SIK 601
            G  PLWL+P Q  + TI    V YA+EI   L+   +  E D R E+I YKIRE     
Sbjct: 528 AGAFPLWLAPTQVKILTINDEVVPYAKEIFKALQERGIRAEIDDRAESIGYKIREANGKY 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           KIP+ +I G  E   R + IR+FGS   + + L + + I+  E+
Sbjct: 588 KIPVQLILGKNEVENREVNIRKFGSQQQESMKLDEFLDIIVDEA 631


>gi|229169303|ref|ZP_04297013.1| Threonyl-tRNA synthetase [Bacillus cereus AH621]
 gi|228614066|gb|EEK71181.1| Threonyl-tRNA synthetase [Bacillus cereus AH621]
          Length = 645

 Score =  650 bits (1676), Expect = 0.0,   Method: Composition-based stats.
 Identities = 250/654 (38%), Positives = 404/654 (61%), Gaps = 22/654 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           M   +K+TFPDG++K FP   T  ++A SIS  L KKAVA  +N ++ DL  P+  +G++
Sbjct: 1   MADVVKITFPDGAVKEFPKGVTTEEIAASISPGLKKKAVAGKLNDEMIDLVTPIEEDGAV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV--AIGPIIEDGFYYDFDKEQPFSSD 117
            IIT +    L ++RHS AH++A+A++ ++ +V++   IGP+IE+GFYYD D E+  + +
Sbjct: 61  SIITLDSEDGLYILRHSTAHLLAQALKRLYKDVKLELGIGPVIENGFYYDIDMEEAITVE 120

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +  +IEK+MQ+I+  +   ++  +   +A   FE   +  K++++  +P    +++Y QG
Sbjct: 121 DFKKIEKEMQKIVNENLEIVRHEVPRTEALRRFEEIGDELKLDLINDLPEDAVISIYEQG 180

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           E+FDLCRG H+ STG++K F KL+ VAGAYWRGDSN  ML RIYGT +  + EL ++L  
Sbjct: 181 EFFDLCRGVHLPSTGKIKVF-KLLSVAGAYWRGDSNNKMLQRIYGTGFVKKAELDEHLRM 239

Query: 238 LEESEKRDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEIN 295
           LEE+++RDHRKL +E+ LF +  + G G+  W  KG  I + +  Y+  ++    Y+ + 
Sbjct: 240 LEEAKERDHRKLGKELKLFTNSQKVGQGLPLWLPKGATIRRIIERYIVDKEASLGYDHVY 299

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP +  + L++ SGHW+ YR  MF     D+         L+PMNCP H+ V+ + + SY
Sbjct: 300 TPVLGSRELYETSGHWNHYRDGMFPSMEMDN-----EELVLRPMNCPHHMMVYKNDIHSY 354

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+  E  ++ NL + +Y
Sbjct: 355 RELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVY 414

Query: 416 KDFGFEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
           KDFG E    +LS R      K    D +W+ A+ ++K  +D +       ++     GE
Sbjct: 415 KDFGLENYSFRLSYRDPADTKKYYADDEMWEKAQGMLKEAMDEMG------LDYYEAEGE 468

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
            AFYGPK +  ++ A+G+D    T+Q+DF LP RF   YV    ++  PV+IHR V  ++
Sbjct: 469 AAFYGPKLDVQVRTALGKDETLSTVQLDFLLPERFELTYVGEDGKQHRPVVIHRGVVSTM 528

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNET 590
           ERF+  +IE +KG  P WL+P+QA V  ++    ++YA+++ + L+   + +E D R E 
Sbjct: 529 ERFVAFLIEEYKGAFPTWLAPVQAQVIPVSPQVHLDYAKKVQDELRRAGIRVELDTREEK 588

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           I YKIRE  ++KIP +++ GD E +E  + +R++G   ++ ++L   + ++  E
Sbjct: 589 IGYKIREAQMQKIPYMLVVGDNEVTENGVNVRKYGEQKSETIALDAFVDMIKVE 642


>gi|30022651|ref|NP_834282.1| threonyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|29898209|gb|AAP11483.1| Threonyl-tRNA synthetase [Bacillus cereus ATCC 14579]
          Length = 646

 Score =  650 bits (1676), Expect = 0.0,   Method: Composition-based stats.
 Identities = 250/654 (38%), Positives = 404/654 (61%), Gaps = 22/654 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           M   +K+TFPDG++K FP   T  ++A SIS  L KKAVA  +N ++ DL  P+  +G++
Sbjct: 2   MADVVKITFPDGAVKEFPKGVTTEEIAASISPGLKKKAVAGKLNDEMIDLVTPIEEDGAV 61

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQ--VAIGPIIEDGFYYDFDKEQPFSSD 117
            IIT +    L ++RHS AH++A+A++ ++ +V+  + IGP+IE+GFYYD D E+  + +
Sbjct: 62  SIITLDSEDGLYILRHSTAHLLAQALKRLYKDVKVELGIGPVIENGFYYDIDMEEAITVE 121

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +  +IEK+MQ+I+  +   ++  +   +A   FE   +  K++++  +P    +++Y QG
Sbjct: 122 DFKKIEKEMQKIVNENLEIVRHEVPRAEAIRRFEEIGDELKLDLINDLPEDAVISIYEQG 181

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           E+FDLCRG H+ STG++K F KL+ VAGAYWRGDSN  ML RIYGTA+  + EL ++L  
Sbjct: 182 EFFDLCRGVHLPSTGKIKVF-KLLSVAGAYWRGDSNNKMLQRIYGTAFVKKAELDEHLRM 240

Query: 238 LEESEKRDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEIN 295
           LEE+++RDHRKL +E+ LF +  + G G+  W  KG  I + +  Y+  ++    Y+ + 
Sbjct: 241 LEEAKERDHRKLGKELKLFTNSQKVGQGLPLWLPKGATIRRIIERYIVDKEASLGYDHVY 300

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP +  + L++ SGHW+ YR  MF     D+         L+PMNCP H+ V+ + + SY
Sbjct: 301 TPVLGSRELYETSGHWNHYRDGMFPSMEMDN-----EELVLRPMNCPHHMMVYKNDIHSY 355

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+  E  ++ NL + +Y
Sbjct: 356 RELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVY 415

Query: 416 KDFGFEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
           KDFG E    +LS R      K    D +W+ A+ ++K  +D +       ++     GE
Sbjct: 416 KDFGLENYSFRLSYRDPADTKKYYADDEMWEKAQGMLKEAMDEMG------LDYYEAEGE 469

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
            AFYGPK +  ++ A+G+D    T+Q+DF LP RF   YV    ++  PV+IHR V  ++
Sbjct: 470 AAFYGPKLDVQVRTALGKDETLSTVQLDFLLPERFELSYVGEDGKQHRPVVIHRGVVSTM 529

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNET 590
           ERF+  +IE +KG  P WL+P+Q  V  ++    ++YA+++ + L+   + +E D R E 
Sbjct: 530 ERFVAFLIEEYKGAFPTWLAPVQVQVIPVSPQVHLDYAKKVQDELRRAGIRVELDTREEK 589

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           I YKIRE  ++KIP +++ GD E +E  + +R++G   ++ ++L   + ++  E
Sbjct: 590 IGYKIREAQMQKIPYMLVVGDNEVTENGVNVRKYGEQKSETIALDAFVDMIKVE 643


>gi|55820651|ref|YP_139093.1| threonyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
 gi|55822542|ref|YP_140983.1| threonyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
 gi|116627458|ref|YP_820077.1| threonyl-tRNA synthetase [Streptococcus thermophilus LMD-9]
 gi|73919831|sp|Q5M0T3|SYT_STRT1 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|73919832|sp|Q5M5B9|SYT_STRT2 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|122267944|sp|Q03LP1|SYT_STRTD RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|55736636|gb|AAV60278.1| threonyl-tRNA synthetase 1 [Streptococcus thermophilus LMG 18311]
 gi|55738527|gb|AAV62168.1| threonyl-tRNA synthetase 1 [Streptococcus thermophilus CNRZ1066]
 gi|116100735|gb|ABJ65881.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Streptococcus
           thermophilus LMD-9]
 gi|312277977|gb|ADQ62634.1| Threonyl-tRNA synthetase ThrS [Streptococcus thermophilus ND03]
          Length = 648

 Score =  650 bits (1676), Expect = 0.0,   Method: Composition-based stats.
 Identities = 263/661 (39%), Positives = 409/661 (61%), Gaps = 26/661 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  +  +GSIEI+
Sbjct: 1   MINITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRVITEDGSIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQ 121
           TP+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D +    S+++L +
Sbjct: 61  TPDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNQAGQISNEDLPR 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWF 180
           IE++M++I+  + P +++ ++ ++ARE+F+   + YK+E++E     +  +T+YRQGE+ 
Sbjct: 121 IEEEMKKIVKENFPSIREEVTKDEAREIFK--NDPYKLELIEEHSEDDGGLTIYRQGEYV 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ RIYGTAW  +++L  YL  LEE
Sbjct: 179 DLCRGPHVPSTGRIQIFHLL-NVAGAYWRGNSDNAMMQRIYGTAWFDKKDLKAYLKRLEE 237

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           +++RDHRKL +E+DLF I+++   G+ FW   G  I + L  Y+  +++   Y+ + TP 
Sbjct: 238 AKERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVDKEVAAGYQHVYTPP 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L++ SGHWD YR +MF          D   F L+PMNCP H+ V+ H + SYREL
Sbjct: 298 IASVELYKTSGHWDHYREDMFPPMDMG----DGEEFVLRPMNCPHHIEVYKHHVHSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  + +D H F   EQ+  E  KI  LII +Y+DF
Sbjct: 354 PIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHTFVAPEQIEEEFKKILQLIIDVYEDF 413

Query: 419 GFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
                  +LS R      K   +D +W++A+ ++K  +D +       +      GE AF
Sbjct: 414 NLTDYRFRLSYRDPADKHKYFDNDEMWENAQRMLKAAVDDMG------VEYYEAEGEAAF 467

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K A+G++    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF
Sbjct: 468 YGPKLDIQVKTALGKEETLSTIQLDFLLPERFDLHYIGADGEEHRPVMIHRGVISTMERF 527

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
             I+IEN+KG  P WL+P Q  +  ++    V+YA E+A  L+   +  E D RNE + +
Sbjct: 528 TAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAKKLRDRGVRAEVDERNEKMQF 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE---SLPPDC 650
           KIR    +KIP  +I GDKE  + ++ +RR+G   T   ++ + +  +  +      PD 
Sbjct: 588 KIRASQTQKIPYQLIVGDKEMKDGTVNVRRYGQKQTHTETVSEFVENILADIARKSRPDA 647

Query: 651 Q 651
           +
Sbjct: 648 E 648


>gi|86143057|ref|ZP_01061479.1| threonyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217]
 gi|85830502|gb|EAQ48961.1| threonyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217]
          Length = 648

 Score =  650 bits (1676), Expect = 0.0,   Method: Composition-based stats.
 Identities = 263/649 (40%), Positives = 392/649 (60%), Gaps = 19/649 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I++T PDGS+K F    T  DVA SIS  LA+  ++   N K  +++ P+  +G++ + 
Sbjct: 1   MIQVTLPDGSVKEFESGTTPFDVANSISAGLARNVISAKYNNKTIEITTPLTEDGALVLF 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
           T  D        HS AHI+A+A++ ++P V++ IGP I+ GFYYD D  ++  S ++  +
Sbjct: 61  TWNDDEGKKAFWHSSAHILAQALEELYPGVKLTIGPAIDKGFYYDVDLGDRSLSENDFKK 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE KM EI      F  + +S   A E+++ +   YKVE++E++     +T      + D
Sbjct: 121 IENKMLEIARGKHEFSMRSVSKADALEMYKKQDNPYKVELIENL-EDGTITFCDHDTFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG H+ +TG VK   KLM VAGAYWRGD N+P L+R+YG ++  Q++L +YL  LEE+
Sbjct: 180 LCRGGHLPNTGFVK-AVKLMSVAGAYWRGDENKPQLTRVYGISFPKQKDLKEYLELLEEA 238

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           +KRDHRKL +E+ LF  ++    G+  W  KG  + + L ++++  + K  YE + +P +
Sbjct: 239 KKRDHRKLGKELQLFTFSQKVGQGLPLWLPKGAALRERLENFLKAAQKKAGYEMVVSPHI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             + L+  SGH+  Y  + F       T  +   F LKPMNCP H  +FN    SYR+LP
Sbjct: 299 GQKELYVTSGHYAKYGEDSFQ---PITTPAEGEEFLLKPMNCPHHCEIFNATQWSYRDLP 355

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
            R AEFG+VYR E SG LHGL RVRGFTQDDAH+FCT +Q+ +E +K+ +L++ ++   G
Sbjct: 356 KRFAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCTPDQLDDEFMKVIDLVLYVFGSLG 415

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           FE    ++S R  +     +G+D  W  AEN +              +N  V  GE AFY
Sbjct: 416 FENFTAQVSLRDPENKEKYIGTDENWAKAENAIINAAKA------KGLNYVVETGEAAFY 469

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDA+GR WQ GTIQVD+NLP RF   Y  S +E+  PVMIHRA FGS+ERF+
Sbjct: 470 GPKLDFMVKDALGRSWQLGTIQVDYNLPERFELAYKGSDNEEHRPVMIHRAPFGSMERFV 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            I++E+  GN PLWL P QA V T++ +   YAQ +  LL++H +    D R ET+  KI
Sbjct: 530 AILLEHTGGNFPLWLMPEQATVLTLSENYENYAQNVLTLLENHDVRATIDDRGETMGRKI 589

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           RE  ++K P ++I G+KEA++ ++ +R+ G      +++ D   I+  E
Sbjct: 590 REAEMQKTPYMLIIGEKEANDGTVSVRKHGGEDLGTMTVADFAKIIEAE 638


>gi|124025364|ref|YP_001014480.1| threonyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A]
 gi|166225477|sp|A2C155|SYT_PROM1 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|123960432|gb|ABM75215.1| Threonyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A]
          Length = 640

 Score =  650 bits (1676), Expect = 0.0,   Method: Composition-based stats.
 Identities = 302/642 (47%), Positives = 429/642 (66%), Gaps = 16/642 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS KN+    T   +A  I   LAK A+A  +NG + D   P+  +  I+IIT +
Sbjct: 4   ITLPDGSEKNYESSVTIEKIATDIGPGLAKAALAGRVNGNLLDTCIPITNDAEIQIITSK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHS AH++  AV+ ++PE ++AIGP+IEDGFYYD   +  F+  +L +IEK+
Sbjct: 64  DNEGLEIIRHSFAHLLGHAVKQLYPEAKMAIGPVIEDGFYYDISYKDTFTPVDLEKIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           ++E+I +D     + +S  KA ++F  + E +K++I+++IP  E + LY+  E+ D+CRG
Sbjct: 124 IKELINKDYDVDVEVVSPAKATQVFSERGEVFKLDIIKNIPKDEIIKLYKHEEYIDMCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +T  ++ F KLMKV+GAYWRGDSN  ML RIYGTAW   +EL +Y+  +EE+EKRD
Sbjct: 184 PHVPNTRHLRAF-KLMKVSGAYWRGDSNNEMLQRIYGTAWKNSKELKEYINRIEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHL 304
           HRKL +++ LFH  E+  G+IFWH  GW I++ L  ++R  I K DY+E+ +PQ++ + L
Sbjct: 243 HRKLGKKLSLFHFQEEAPGMIFWHPNGWTIYRVLQDFIRETISKYDYQELKSPQIVCRSL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHWD ++ +MF       T  + + +A+KPMNCP HV VFN GLKSYR+LP+RL+E
Sbjct: 303 WEKSGHWDKFKEDMFT------TTSENKEYAIKPMNCPCHVQVFNQGLKSYRDLPIRLSE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNEPSG+LHGLMRVR F QDD H+FCT EQ+  E     +L+  +YK FGF  I+
Sbjct: 357 FGSCHRNEPSGALHGLMRVRNFVQDDGHIFCTNEQIQEEVQSFIDLVFEVYKAFGFNSIL 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +KLSTRPEKRVGSD +WD +E  +   LD+        ++  +L GEGAFYGPK E+ LK
Sbjct: 417 IKLSTRPEKRVGSDDVWDKSEKALSDALDS------KGLDWSLLPGEGAFYGPKIEFSLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D + R WQCGTIQVDF++P R N+ Y++   +K  PVM+HRA+ GS ERFIGI+IEN+ G
Sbjct: 471 DCLNRVWQCGTIQVDFSMPERLNSSYIDVDGKKQPPVMLHRAILGSFERFIGILIENYSG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
           NLP+WL P+Q +V  IT    +   +  + L  +      D RNE + +KIREH++++IP
Sbjct: 531 NLPIWLCPLQIVVMGITDRNNDACLDTKSKLIKYGFRASVDTRNEKVGFKIREHTMQRIP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
            +II GDKE     I +R        K++L     ++  ES+
Sbjct: 591 FLIIIGDKEEENNEISVRTREGKDLGKMTLDKF-KVIMDESI 631


>gi|257124962|ref|YP_003163076.1| threonyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
 gi|257048901|gb|ACV38085.1| threonyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
          Length = 636

 Score =  650 bits (1676), Expect = 0.0,   Method: Composition-based stats.
 Identities = 304/651 (46%), Positives = 431/651 (66%), Gaps = 18/651 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I++  PDGS +      T  + A+SI  SL K  V   I+G   D S  + + G+IEII
Sbjct: 1   MIEMILPDGSKRQLENPMTVVEFAKSIGSSLGKATVGAIIDGVQVDPSHIIDKSGTIEII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T    + + +IRHS AHIMA+AVQ ++P  +V IGP+IE+GF+YDFD E+PF+ ++LA+I
Sbjct: 61  TNTSEKGIEIIRHSAAHIMAQAVQRLFPNTKVTIGPVIENGFFYDFDPEKPFTEEDLAKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M +I+  +  F +  ++ E+A++ F  K E YKVEI+E + A   V++Y+QGE+ DL
Sbjct: 121 EGEMAKIVKENYEFKRSEMTAEEAKKFFAEKGETYKVEIIEDLGAD-KVSIYQQGEFIDL 179

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRG H+ STG +K F KLM  AGAYWRGDSN  ML RIYG A+ T++EL  YL  +EE+E
Sbjct: 180 CRGTHIPSTGYLKAF-KLMSTAGAYWRGDSNNKMLQRIYGVAFATKKELDDYLTMMEEAE 238

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLD 301
           KRDHRKL +++DLF + E G G  F+  KG ++F  L    R    K  Y+EI TP +LD
Sbjct: 239 KRDHRKLGKQLDLFFVDEHGPGFPFFMPKGVELFNKLQEIWRVEHKKRGYQEIKTPIMLD 298

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW +YR NM+       +  D + +A+KPMNCPG +  + + L SY++LP++
Sbjct: 299 KELWEISGHWFNYRENMYT------STIDEKEYAIKPMNCPGSIIAYKNNLHSYKDLPLK 352

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
             E G V+R+E SG+LHGLMRVR FTQDDAHVFCTKEQ+  + ++I +L    Y  FGFE
Sbjct: 353 YGEMGLVHRHEFSGALHGLMRVRAFTQDDAHVFCTKEQIEEQIIEIIDLYDKFYTVFGFE 412

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
             + +LST+P+K +GSD +W+ AE  +K  L+         IN  +  G+GAFYGPK ++
Sbjct: 413 YHI-ELSTKPDKAIGSDEIWEMAEANLKSALEH------KGINYKLNPGDGAFYGPKIDF 465

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KD+IGR WQCGTIQ+DFNLP+RF   Y+ +  EK  PVMIHRA++GS+ERFIGI+IE+
Sbjct: 466 KMKDSIGRIWQCGTIQLDFNLPARFEMSYIGADGEKHEPVMIHRAMYGSLERFIGILIEH 525

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH-SI 600
           + G  P WL+P+QA + TI+   V +A+E+   L+   + +E D R E I YKIRE   +
Sbjct: 526 YAGAFPTWLAPVQARILTISDEQVPFAKELFIKLQDAGIRVELDTRVEKIGYKIREANGV 585

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           +KIP+ +I G  E +   + +RRFGS  ++ VS+ + I  L +ES  P  +
Sbjct: 586 QKIPVQLIIGKNEVANNEVNVRRFGSQDSKNVSVDEIIETLKQESHVPFSK 636


>gi|229032221|ref|ZP_04188194.1| Threonyl-tRNA synthetase [Bacillus cereus AH1271]
 gi|229076078|ref|ZP_04209046.1| Threonyl-tRNA synthetase [Bacillus cereus Rock4-18]
 gi|229105203|ref|ZP_04235852.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-28]
 gi|228678129|gb|EEL32357.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-28]
 gi|228706941|gb|EEL59146.1| Threonyl-tRNA synthetase [Bacillus cereus Rock4-18]
 gi|228729001|gb|EEL80004.1| Threonyl-tRNA synthetase [Bacillus cereus AH1271]
          Length = 645

 Score =  649 bits (1675), Expect = 0.0,   Method: Composition-based stats.
 Identities = 250/654 (38%), Positives = 404/654 (61%), Gaps = 22/654 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           M   +K+TFPDG++K FP   T  ++A SIS  L KKAVA  +N ++ DL  P+  +G++
Sbjct: 1   MADVVKITFPDGAVKEFPKGVTTEEIAASISPGLKKKAVAGKLNDEMIDLVTPIEEDGAV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV--AIGPIIEDGFYYDFDKEQPFSSD 117
            IIT +    L ++RHS AH++A+A++ ++ + ++   IGP+IE+GFYYD D E+  + +
Sbjct: 61  SIITLDSEDGLYILRHSTAHLLAQALKRLYKDAKLELGIGPVIENGFYYDIDMEEAITVE 120

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +  +IEK+MQ+I+  +   ++  +   +A   FE   +  K++++  +P    +++Y QG
Sbjct: 121 DFKKIEKEMQKIVNENLEIVRHEVPRAEALRRFEEIGDELKLDLINDLPEDAVISIYEQG 180

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           E+FDLCRG H+ STG++K F KL+ VAGAYWRGDSN  ML RIYGTA+  + EL ++L  
Sbjct: 181 EFFDLCRGVHLPSTGKIKVF-KLLSVAGAYWRGDSNNKMLQRIYGTAFVKKAELDEHLRM 239

Query: 238 LEESEKRDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEIN 295
           LEE+++RDHRKL +E+ LF +  + G G+  W  KG  I + +  Y+  ++    Y+ + 
Sbjct: 240 LEEAKERDHRKLGKELKLFTNSQKVGQGLPLWLPKGATIRRIIERYIVDKEASLGYDHVY 299

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP +  + L++ SGHW+ YR  MF     D+         L+PMNCP H+ V+ + + SY
Sbjct: 300 TPVLGSRELYETSGHWNHYRDGMFPSMEMDN-----EELVLRPMNCPHHMMVYKNDIHSY 354

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+  E  ++ NL + +Y
Sbjct: 355 RELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVY 414

Query: 416 KDFGFEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
           KDFG E    +LS R      K    D +W+ A+ ++K  +D +       ++     GE
Sbjct: 415 KDFGLENYSFRLSYRDPADTKKYYADDEMWEKAQGMLKEAMDEMG------LDYYEAEGE 468

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
            AFYGPK +  ++ A+G+D    T+Q+DF LP RF   YV    ++  PV+IHR V  ++
Sbjct: 469 AAFYGPKLDVQVRTALGKDETLSTVQLDFLLPERFELAYVGEDGKQHRPVVIHRGVVSTM 528

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNET 590
           ERF+  +IE +KG  P WL+P+QA V  ++    ++YA+++ + L+   + +E D R E 
Sbjct: 529 ERFVAFLIEEYKGAFPTWLAPVQAQVIPVSPQVHLDYAKKVQDELRRAGIRVELDTREEK 588

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           I YKIRE  ++KIP +++ GD E +E  + +R++G   ++ ++L   + ++  E
Sbjct: 589 IGYKIREAQMQKIPYMLVVGDNEVTENGVNVRKYGEQKSETIALDAFVDMIKVE 642


>gi|238898885|ref|YP_002924567.1| threonine tRNA synthetase [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
 gi|259516538|sp|C4K776|SYT_HAMD5 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|229466645|gb|ACQ68419.1| threonine tRNA synthetase [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
          Length = 638

 Score =  649 bits (1675), Expect = 0.0,   Method: Composition-based stats.
 Identities = 295/647 (45%), Positives = 426/647 (65%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS +++    +  DVA  I   LAK  +A   N ++ D  D +  +G +
Sbjct: 1   MPV---ITLPDGSTRHYEQSLSVLDVALDIHPRLAKSCIAGRFNDQLIDACDLLSVDGKL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           +IITP D  ++ +IRHSCAH++  AV+ +WPE ++AIGP+IE+GFYYD D E P + ++L
Sbjct: 58  QIITPSDGEAVEIIRHSCAHLLGHAVKQLWPETKMAIGPVIENGFYYDLDIESPLTQEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M E+  ++   +K+ +S +KAR+ F  + E+YK+ IL E+I + +   LY   E
Sbjct: 118 ELLEKRMHELAHKNYTVIKKKVSWQKARDTFSKRGESYKIAILDENIDSSDQPNLYFHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KL K +GAYWRGDS    L R+YGTAW+ +++L  YL  L
Sbjct: 178 YIDMCRGPHVPNMSFCHYF-KLQKTSGAYWRGDSKNKTLQRVYGTAWSDKKQLDAYLNRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRK+ +  DL+H  E+  G++FWH  GW +F+ L   +R K+K+ +Y+E+  P
Sbjct: 237 EEATKRDHRKIGKTQDLYHFQEEAPGMVFWHENGWIVFRELEILIREKLKEYEYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW+++GHW++Y  NMF       T+ + R + +KPMNCPGH+ +F  GLKSYR+
Sbjct: 297 FMMDRVLWEKTGHWENYSENMFT------TLSENREYCIKPMNCPGHLEIFKQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT++Q+  E      +   IY+ 
Sbjct: 351 LPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEKQVRKEVSNCIKMTYDIYQT 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF+KI VKLSTRPEKR+GSD +W  AE  +  VL       +  I   +  GEGAFYGP
Sbjct: 411 FGFKKIAVKLSTRPEKRIGSDEIWTQAEEDLASVLK------EQGITFELQPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF+LP R NAFY++ +SE+  PVMIHRA+ GSIERFIGI
Sbjct: 465 KIEFTLYDCLDRAWQCGTVQLDFSLPVRLNAFYIDENSERQVPVMIHRAILGSIERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E + G  P+WL+P+Q ++  IT    +Y +++A  L+   +  + D RNE I +KIR+
Sbjct: 525 LTEEYAGFFPVWLAPVQVMLINITEKQSDYVKKVAKNLQQLGVRAKVDLRNEKIGFKIRQ 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H++ +IP I++CGDKE     I +R          S+      L +E
Sbjct: 585 HTLYRIPYILVCGDKEVESNQIAVRTHSGKDLGSFSVNVFADKLLEE 631


>gi|323490461|ref|ZP_08095668.1| threonyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
 gi|323395865|gb|EGA88704.1| threonyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
          Length = 642

 Score =  649 bits (1675), Expect = 0.0,   Method: Composition-based stats.
 Identities = 255/652 (39%), Positives = 415/652 (63%), Gaps = 20/652 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M   I+L FPDG++K F    T  ++A+SIS  L KKA+A  ++GK+ DL  P+  +G I
Sbjct: 1   MADMIQLKFPDGAVKEFEQGVTTEEIAQSISPGLRKKALAGKVDGKLVDLRTPLTEDGEI 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            I+TPE   +L ++RHS AH++A+A++ ++P+ ++ IGP+IE GFYYD D E   +S++L
Sbjct: 61  AIVTPESDEALEILRHSSAHLLAQAIKRMYPDAKLGIGPVIEHGFYYDIDTETAITSEDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEK+M++II  +   ++  ++  +A+E F + ++ YK+E+LE+IP  + V++Y QG++
Sbjct: 121 PLIEKEMKQIINENVEVIRHDVTRAEAQERFAAIEDPYKLELLEAIPDGDQVSIYEQGDF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRG HV STG++K+F KL+ VAGAYWRG+S+  ML RIYGTA+  +++L  +L  LE
Sbjct: 181 FDLCRGVHVPSTGKLKEF-KLLSVAGAYWRGNSDNKMLQRIYGTAFFKKEDLKAHLEMLE 239

Query: 240 ESEKRDHRKLAREMDLFH-IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           E+++RDHRK+ +E++LF    + G G+  W  KG  I + +  Y+  K +   Y+ + TP
Sbjct: 240 EAKERDHRKIGKELNLFMNSQKVGQGLPMWLPKGATIRRIIERYIVDKEERLGYDHVYTP 299

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    L++ SGHWD Y+ +MF V   D+         L+PMNCP H+ +F  G+ SYR+
Sbjct: 300 VMGSVELYKTSGHWDHYQEDMFPVMKMDN-----EELVLRPMNCPHHMMIFKQGIHSYRQ 354

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           +PVR+AE G ++R E SG+L GL RVRG T +DAH+F   +Q+  E  ++ NLI+ +YKD
Sbjct: 355 MPVRIAELGLMHRYEMSGALSGLQRVRGMTLNDAHLFVRPDQIKEEFKRVVNLIVEVYKD 414

Query: 418 FGFEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           F       +LS R      K    DA+W+ A+ ++K  +D +       ++   + GE A
Sbjct: 415 FNINDYSFRLSYRDPEDKEKYFDDDAMWNRAQAMLKEAMDEL------DVDYIEVEGEAA 468

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  +K A+G++    T+Q+DF LP RF+  Y+    ++  PV+IHR V  ++ER
Sbjct: 469 FYGPKVDVQVKTALGKEETLSTVQLDFLLPERFDLSYIGEDGKQHRPVVIHRGVVSTMER 528

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
           F+  +IE +KG  P WL+P+Q  +  ++  +   Y +E+   L+SH + ++ D R+E + 
Sbjct: 529 FVAFLIEEYKGAFPTWLAPVQVELIPVSLDAHSAYTKELQEKLQSHKIRVDIDERDEKLG 588

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           YKIRE  ++K+P +++ GDKE  + S+ +R++G   ++ +   D + ++  E
Sbjct: 589 YKIREAQMQKVPYMLVLGDKELEDGSVNVRKYGEQKSESMPFEDFVKLVQSE 640


>gi|322517198|ref|ZP_08070081.1| threonine--tRNA ligase [Streptococcus vestibularis ATCC 49124]
 gi|322124257|gb|EFX95773.1| threonine--tRNA ligase [Streptococcus vestibularis ATCC 49124]
          Length = 648

 Score =  649 bits (1675), Expect = 0.0,   Method: Composition-based stats.
 Identities = 264/661 (39%), Positives = 410/661 (62%), Gaps = 26/661 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  +  +GSIEI+
Sbjct: 1   MINITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTARAITEDGSIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQ 121
           TP+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D +    S+++L +
Sbjct: 61  TPDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNQAGQISNEDLPR 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWF 180
           IE++M++I+  + P +++ ++ ++ARE+F+   + YK+E++E     E  +T+YRQGE+ 
Sbjct: 121 IEEEMKKIVKENFPSIREEVTKDEAREIFK--NDPYKLELIEEHSEDEGGLTIYRQGEYV 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ RIYGTAW  +++L  YL  LEE
Sbjct: 179 DLCRGPHVPSTGRIQVFHLL-NVAGAYWRGNSDNAMMQRIYGTAWFDKKDLKAYLKRLEE 237

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           +++RDHRKL +E+DLF I+++   G+ FW   G  I + L  Y+  +++   Y+ + TP 
Sbjct: 238 AKERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVDKEVAAGYQHVYTPP 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L++ SGHWD YR +MF          D   F L+PMNCP H+ V+ H + SYREL
Sbjct: 298 IASVELYKTSGHWDHYREDMFPPMDMG----DGEEFVLRPMNCPHHIEVYKHHVHSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  + +D H F   EQ+ +E  KI  LII +Y+DF
Sbjct: 354 PIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHTFVAPEQIEDEFKKILQLIIDVYEDF 413

Query: 419 GFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
                  +LS R      K   +D +W++A+ ++K  +D +       +      GE AF
Sbjct: 414 NLTDYRFRLSYRDPADKHKYFDNDEMWENAQRMLKAAVDDMG------VEYYEAEGEAAF 467

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K A+G++    TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF
Sbjct: 468 YGPKLDIQVKTALGKEETLSTIQLDFLLPERFDLHYIGADGEEHRPVMIHRGVISTMERF 527

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
             I+IEN+KG  P WL+P Q  +  ++    V+YA E+A  L+   +  E D RNE + +
Sbjct: 528 TAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAKELRDRGVRAEVDERNEKMQF 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE---SLPPDC 650
           KIR    +KIP  +I GDKE  + ++ +RR+G   T   ++ + +  +  +      PD 
Sbjct: 588 KIRASQTQKIPYQLIVGDKEMEDGTVNVRRYGQKQTHTETVSEFVENILADIARKSRPDA 647

Query: 651 Q 651
           +
Sbjct: 648 E 648


>gi|261416474|ref|YP_003250157.1| threonyl-tRNA synthetase [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261372930|gb|ACX75675.1| threonyl-tRNA synthetase [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 695

 Score =  649 bits (1675), Expect = 0.0,   Method: Composition-based stats.
 Identities = 295/655 (45%), Positives = 427/655 (65%), Gaps = 27/655 (4%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEI 61
           S I+LTFPDGS+++     TG ++A+SIS  LA+KA+ V +  KV DL+ P+ E G+I+I
Sbjct: 52  SQIELTFPDGSVRSVASGTTGLEIAKSISEGLARKALGVKLGDKVLDLNRPLTESGAIKI 111

Query: 62  ITP--EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           ITP  +DP +L ++RHSC+H++AEA+  ++P  ++A GP I+ GFYYD     P    + 
Sbjct: 112 ITPNNDDPDALMLLRHSCSHVLAEAICDLFPGTKLAYGPAIDKGFYYDLMTPTPIQQSDF 171

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEI----LESIPAKENVTLYR 175
            +IEK+M+EII  D PF++  +S E   +  E   + YK +     L    +   ++ Y 
Sbjct: 172 ERIEKRMKEIIKEDRPFVRCEVSAEDGLKRTE--GDKYKTDNAQRALAREGSDGTLSFYV 229

Query: 176 QGE----WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQEL 231
            GE    + DLC GPHV STG++K F K++ ++GAYW GD N   L+R+YGT +  ++ L
Sbjct: 230 TGEPGKNFEDLCAGPHVPSTGKLKNF-KVLSMSGAYWHGDQNSDQLTRVYGTCFADKEGL 288

Query: 232 TQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDD 290
             YL FLEE+EKRDHRK+ +EMDL+HI +   G++FWH KG K+   L  Y+R KI +  
Sbjct: 289 ETYLKFLEEAEKRDHRKIGKEMDLYHIEDHSPGMVFWHPKGTKMVNALKDYIRGKIDRRG 348

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH 350
           Y E+ TP+++++ LW +SGH D Y  NMF     D         A+KPMNCP H+ +FN 
Sbjct: 349 YLEVITPEIVNKTLWIKSGHADKYNENMFKTLAGDV------EMAVKPMNCPCHIQIFNT 402

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
           GL+S+R+LP+RLAEFG  +R EP+G++HGLMRVRGF QDDAH+FCT++Q+ +E      L
Sbjct: 403 GLRSWRDLPMRLAEFGKCHRYEPAGTMHGLMRVRGFVQDDAHIFCTEDQIASEVADFCAL 462

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
           +  IY DFGF+ I+VK STRPEKRVGSD +WD AE  +              ++  +  G
Sbjct: 463 VKEIYHDFGFDDIVVKFSTRPEKRVGSDEIWDKAEAALAEATKLAG------LDYILNPG 516

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           EGAFYGPK E+ LKD++GRDWQCGTIQVDFNLP R  A YV   ++K  PVM+HRA  GS
Sbjct: 517 EGAFYGPKLEFTLKDSLGRDWQCGTIQVDFNLPQRLGAEYVGKDNQKHIPVMLHRAAVGS 576

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
           IERF+GI+IE F G+ PLWL+P+QA V  I+   V+YA+++   L +  + +E D  NE 
Sbjct: 577 IERFLGILIEEFMGDFPLWLAPVQARVLPISEKFVDYAKQVEKELVNAGVRVEVDESNEK 636

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           + YKIR+  ++K+P ++I G+KE ++  + +R+        +++   + +  ++ 
Sbjct: 637 LGYKIRQCELQKVPYLLIVGEKEVADGVVSVRKRKDGDKGSMTVAQFLEMTAEDR 691


>gi|30264646|ref|NP_847023.1| threonyl-tRNA synthetase [Bacillus anthracis str. Ames]
 gi|47530117|ref|YP_021466.1| threonyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49187467|ref|YP_030719.1| threonyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|49481700|ref|YP_038622.1| threonyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|52140935|ref|YP_085897.1| threonyl-tRNA synthetase [Bacillus cereus E33L]
 gi|65321944|ref|ZP_00394903.1| COG0441: Threonyl-tRNA synthetase [Bacillus anthracis str. A2012]
 gi|165871455|ref|ZP_02216102.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167636725|ref|ZP_02395009.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|167642081|ref|ZP_02400304.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|170689721|ref|ZP_02880895.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|170708708|ref|ZP_02899146.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|177653139|ref|ZP_02935426.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|196042361|ref|ZP_03109631.1| threonine--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|218905803|ref|YP_002453637.1| threonyl-tRNA synthetase [Bacillus cereus AH820]
 gi|225866553|ref|YP_002751931.1| threonyl-tRNA synthetase [Bacillus cereus 03BB102]
 gi|227817360|ref|YP_002817369.1| threonyl-tRNA synthetase [Bacillus anthracis str. CDC 684]
 gi|228917215|ref|ZP_04080772.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|228929623|ref|ZP_04092641.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228935883|ref|ZP_04098693.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228948301|ref|ZP_04110584.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|229093673|ref|ZP_04224773.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-42]
 gi|229124142|ref|ZP_04253334.1| Threonyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|229186832|ref|ZP_04313987.1| Threonyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
 gi|229601552|ref|YP_002868855.1| threonine--tRNA ligase [Bacillus anthracis str. A0248]
 gi|254686931|ref|ZP_05150789.1| threonyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066]
 gi|254720893|ref|ZP_05182684.1| threonyl-tRNA synthetase [Bacillus anthracis str. A1055]
 gi|254736684|ref|ZP_05194390.1| threonyl-tRNA synthetase [Bacillus anthracis str. Western North
           America USA6153]
 gi|254741722|ref|ZP_05199409.1| threonyl-tRNA synthetase [Bacillus anthracis str. Kruger B]
 gi|254754681|ref|ZP_05206716.1| threonyl-tRNA synthetase [Bacillus anthracis str. Vollum]
 gi|254757513|ref|ZP_05209540.1| threonyl-tRNA synthetase [Bacillus anthracis str. Australia 94]
 gi|30259321|gb|AAP28509.1| threonine--tRNA ligase [Bacillus anthracis str. Ames]
 gi|47505265|gb|AAT33941.1| threonyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49181394|gb|AAT56770.1| threonyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|49333256|gb|AAT63902.1| threonine--tRNA ligase (threonyl-tRNA synthetase) [Bacillus
           thuringiensis serovar konkukian str. 97-27]
 gi|51974404|gb|AAU15954.1| threonine--tRNA ligase (threonyl-tRNA synthetase) [Bacillus cereus
           E33L]
 gi|164712752|gb|EDR18282.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167509956|gb|EDR85379.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|167527843|gb|EDR90677.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|170126388|gb|EDS95277.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|170666324|gb|EDT17113.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|172081663|gb|EDT66734.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|196026805|gb|EDX65442.1| threonine--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|218536622|gb|ACK89020.1| threonyl-tRNA synthetase [Bacillus cereus AH820]
 gi|225787158|gb|ACO27375.1| threonine--tRNA ligase [Bacillus cereus 03BB102]
 gi|227005330|gb|ACP15073.1| threonine--tRNA ligase [Bacillus anthracis str. CDC 684]
 gi|228596569|gb|EEK54234.1| Threonyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
 gi|228659444|gb|EEL15092.1| Threonyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|228689760|gb|EEL43567.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-42]
 gi|228811288|gb|EEM57626.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228823651|gb|EEM69473.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228830010|gb|EEM75629.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228842416|gb|EEM87507.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|229265960|gb|ACQ47597.1| threonine--tRNA ligase [Bacillus anthracis str. A0248]
          Length = 645

 Score =  649 bits (1675), Expect = 0.0,   Method: Composition-based stats.
 Identities = 250/654 (38%), Positives = 404/654 (61%), Gaps = 22/654 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           M   +K+TFPDG++K FP   T  ++A SIS  L KKAVA  +N ++ DL  P+  +G++
Sbjct: 1   MADVVKITFPDGAVKEFPKGVTTEEIAASISPGLKKKAVAGKLNDEMIDLVTPIEEDGAV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQ--VAIGPIIEDGFYYDFDKEQPFSSD 117
            IIT +    L ++RHS AH++A+A++ ++ +V+  + IGP+IE+GFYYD D E+  + +
Sbjct: 61  SIITLDSEDGLYILRHSTAHLLAQALKRLYKDVKVELGIGPVIENGFYYDIDMEEAITVE 120

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +  +IEK+MQ+I+  +   ++  +   +A   FE   +  K++++  +P    +++Y QG
Sbjct: 121 DFKKIEKEMQKIVNENLEIVRHEVPRAEAIRRFEEIGDELKLDLINDLPEDAVISIYEQG 180

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           E+FDLCRG H+ STG++K F KL+ VAGAYWRGDSN  ML RIYGTA+  + EL ++L  
Sbjct: 181 EFFDLCRGVHLPSTGKIKVF-KLLSVAGAYWRGDSNNKMLQRIYGTAFVKKAELDEHLRM 239

Query: 238 LEESEKRDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEIN 295
           LEE+++RDHRKL +E+ LF +  + G G+  W  KG  I + +  Y+  ++    Y+ + 
Sbjct: 240 LEEAKERDHRKLGKELKLFTNSQKVGQGLPLWLPKGATIRRIIERYIVDKEASLGYDHVY 299

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP +  + L++ SGHW+ YR  MF     D+         L+PMNCP H+ V+ + + SY
Sbjct: 300 TPVLGSRELYETSGHWNHYRDGMFPSMEMDN-----EELVLRPMNCPHHMMVYKNDIHSY 354

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+  E  ++ NL + +Y
Sbjct: 355 RELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVY 414

Query: 416 KDFGFEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
           KDFG E    +LS R      K    D +W+ A+ ++K  +D +       ++     GE
Sbjct: 415 KDFGLENYSFRLSYRDPEDTKKYYADDEMWEKAQGMLKEAMDEMG------LDYYEAEGE 468

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
            AFYGPK +  ++ A+G+D    T+Q+DF LP RF   YV    ++  PV+IHR V  ++
Sbjct: 469 AAFYGPKLDVQVRTALGKDETLSTVQLDFLLPERFELSYVGEDGKQHRPVVIHRGVVSTM 528

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNET 590
           ERF+  +IE +KG  P WL+P+Q  V  ++    ++YA+++ + L+   + +E D R E 
Sbjct: 529 ERFVAFLIEEYKGAFPTWLAPVQVQVIPVSPQVHLDYAKKVQDELRRAGIRVELDTREEK 588

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           I YKIRE  ++KIP +++ GD E +E  + +R++G   ++ ++L   + ++  E
Sbjct: 589 IGYKIREAQMQKIPYMLVVGDNEVTENGVNVRKYGEQKSETIALDAFVDMIKVE 642


>gi|229099037|ref|ZP_04229971.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-29]
 gi|229118067|ref|ZP_04247426.1| Threonyl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|228665290|gb|EEL20773.1| Threonyl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|228684265|gb|EEL38209.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-29]
          Length = 645

 Score =  649 bits (1675), Expect = 0.0,   Method: Composition-based stats.
 Identities = 251/654 (38%), Positives = 405/654 (61%), Gaps = 22/654 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           M   +K+TFPDG++K FP   T  ++A SIS  L KKAVA  +N ++ DL  P+  +G++
Sbjct: 1   MADVVKITFPDGAVKEFPKGVTTEEIAASISPGLKKKAVAGKLNDEMIDLVTPIEEDGAV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV--AIGPIIEDGFYYDFDKEQPFSSD 117
            IIT +    L ++RHS AH++A+A++ ++ +V++   IGP+IE+GFYYD D E+  + +
Sbjct: 61  SIITLDSEDGLYILRHSTAHLLAQALKRLYKDVKLELGIGPVIENGFYYDIDMEEAITVE 120

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +  +IEK+MQ+I+  +   ++  +   +A   FE   +  K++++  +P    +++Y QG
Sbjct: 121 DFKKIEKEMQKIVNENLEIVRHEVPRAEALRRFEEIGDELKLDLINDLPEDAVISIYEQG 180

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           E+FDLCRG H+ STG++K F KL+ VAGAYWRGDSN  ML RIYGTA+  + EL ++L  
Sbjct: 181 EFFDLCRGVHLPSTGKIKVF-KLLSVAGAYWRGDSNNKMLQRIYGTAFVKKAELDEHLRM 239

Query: 238 LEESEKRDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEIN 295
           LEE+++RDHRKL +E+ LF +  + G G+  W  KG  I + +  Y+  ++    Y+ + 
Sbjct: 240 LEEAKERDHRKLGKELKLFTNSQKVGQGLPLWLPKGATIRRIIERYIVDKEASLGYDHVY 299

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP +  + L++ SGHW+ YR  MF     D+         L+PMNCP H+ V+ + + SY
Sbjct: 300 TPVLGSRELYETSGHWNHYRDGMFPSMEMDN-----EELVLRPMNCPHHMMVYKNDIHSY 354

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+  E  ++ NL + +Y
Sbjct: 355 RELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVY 414

Query: 416 KDFGFEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
           KDFG E    +LS R      K    D +W+ A+ ++K  +D +       ++     GE
Sbjct: 415 KDFGLENYSFRLSYRDPADTKKYYADDEMWEKAQGMLKEAMDEMG------LDYYEAEGE 468

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
            AFYGPK +  ++ A+G+D    T+Q+DF LP RF   YV    ++  PV+IHR V  ++
Sbjct: 469 AAFYGPKLDVQVRTALGKDETLSTVQLDFLLPERFELAYVGEDGKQHRPVVIHRGVVSTM 528

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNET 590
           ERF+  +IE +KG  P WL+P+QA V  ++    ++YA+++ + L+   + +E D R E 
Sbjct: 529 ERFVAFLIEEYKGAFPTWLAPVQAQVIPVSPQVHLDYAKKVQDELRRAGIRVELDTREEK 588

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           I YKIRE  ++KIP +++ GD E +E  + +R++G   ++ ++L   + ++  E
Sbjct: 589 IGYKIREAQMQKIPYMLVVGDNEVTENGVNVRKYGEQKSETIALDAFVDMIKVE 642


>gi|257875532|ref|ZP_05655185.1| threonyl-tRNA synthetase [Enterococcus casseliflavus EC20]
 gi|257809698|gb|EEV38518.1| threonyl-tRNA synthetase [Enterococcus casseliflavus EC20]
          Length = 646

 Score =  649 bits (1675), Expect = 0.0,   Method: Composition-based stats.
 Identities = 258/648 (39%), Positives = 403/648 (62%), Gaps = 23/648 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +TFPDG+ K F V  T  ++AESIS+SLAKKA+A  +NG++ DLS P+  + +IEI+TP+
Sbjct: 5   ITFPDGAKKEFAVGVTTKEIAESISKSLAKKALAGKVNGQLIDLSRPIEEDATIEIVTPD 64

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQIEK 124
              +L ++RHS AH+MA+A++ ++P +   +GP I+ GFYYD D  E P ++++L  IE 
Sbjct: 65  HEDALGLLRHSTAHLMAQAMRRLYPSIHFGVGPAIDSGFYYDTDNGENPVTAEDLPAIEA 124

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
           +M +II  + P  ++ L+ E+A  LF    + YKVE++  +P  E +T Y+QGE+ DLCR
Sbjct: 125 EMMKIIKENLPIERRVLTKEEALTLFAE--DPYKVELITELPDDETITAYQQGEFVDLCR 182

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV STG++ + +KL+ VAGAYWRG S+  M+ R+YGTA+  +++L +++   EE+++R
Sbjct: 183 GPHVPSTGRI-QVYKLLSVAGAYWRGSSDNQMMQRVYGTAFFDKKDLKEFIRLREEAKER 241

Query: 245 DHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQ 302
           DHRKL +E++LF ++ +   G+ FW  KG  I +T+  Y+  ++I   Y+ + TP + + 
Sbjct: 242 DHRKLGKELELFMLSPEVGAGLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIMANV 301

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            L++ SGHWD Y  +MF          D     L+PMNCP H+ V+ + + SYRELP+R+
Sbjct: 302 DLYKTSGHWDHYHEDMFPPMDMG----DGEMLVLRPMNCPHHMMVYKNDIHSYRELPIRI 357

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AE G ++R E SG+L GL RVR  T +D H F   +Q+  E  +  +L+I +Y+DF    
Sbjct: 358 AELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKEEFKRTLDLMIGVYEDFNITD 417

Query: 423 IMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
              +LS R  +        DA+W++A+ ++K  +D ++      ++     GE AFYGPK
Sbjct: 418 YRFRLSYRDPQNKDKYFDDDAMWENAQTMLKAAMDELE------LDYFEAEGEAAFYGPK 471

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK-CHPVMIHRAVFGSIERFIGI 537
            +  +K A+G +    TIQ+DF LP RF+  YV    E    PV+IHR +  ++ERF+  
Sbjct: 472 LDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENNHRPVVIHRGIVSTMERFVAY 531

Query: 538 MIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           + E +KG  P WL+PIQA +  ++  +  +YA EI   L++  L +E D RNE + YKIR
Sbjct: 532 LTEVYKGAFPTWLAPIQASIIPVSVEAHSDYAYEIKERLQAQGLRVEVDDRNEKMGYKIR 591

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
               +KIP  I+ GD+E ++ ++ IRR+GS  TQ   L   +  +  E
Sbjct: 592 ASQTQKIPYQIVVGDQEVNDATVNIRRYGSKETQVEELNLFVDAMAAE 639


>gi|225868159|ref|YP_002744107.1| threonyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus]
 gi|259516675|sp|C0MCN7|SYT_STRS7 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|225701435|emb|CAW98547.1| threonyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus]
          Length = 648

 Score =  649 bits (1675), Expect = 0.0,   Method: Composition-based stats.
 Identities = 261/651 (40%), Positives = 404/651 (62%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            I +TFPDG+++ F    T  ++A+SIS+SLAKKA+A   NG++ D +  +  +GSIEII
Sbjct: 1   MITITFPDGAVREFESGVTTFEIADSISKSLAKKALAGKFNGQLIDTTRAIEEDGSIEII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQ 121
           T +   +  V+RHS AH+ A+A + ++P++ + +GP I DGFYYD D  +   S+++L +
Sbjct: 61  TADHEDAFEVLRHSAAHLFAQAAKRLFPKLHLGVGPAIADGFYYDTDNADGQISNEDLPR 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKE-NVTLYRQGEWF 180
           IE++M++I+  + P +++ ++ E+A ELF+   + YKVE++         +T+YRQGE+ 
Sbjct: 121 IEEEMKKIVKENFPCIREEITKEEALELFK--DDPYKVELINEHADDAAGLTVYRQGEFV 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ R+YGTAW  +++L  YL  LEE
Sbjct: 179 DLCRGPHVPSTGRIQVFHLL-NVAGAYWRGNSDNNMMQRVYGTAWFDKKDLKAYLTRLEE 237

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           +++RDHRKL +E+DLF I+++   G+ FW   G  I +TL  Y+  +++   Y+ + TP 
Sbjct: 238 AKERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRTLERYITDKELASGYQHVYTPP 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L++ SGHW+ Y+ +MF          D   F L+PMNCP H+ V+ + + SYREL
Sbjct: 298 LASVELYKTSGHWEHYQEDMFPTMDMG----DGEEFVLRPMNCPHHIQVYKNHVHSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  T +D H+F   EQ+  E  +   LII +Y+DF
Sbjct: 354 PIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHLFVMPEQIQEEFQRALQLIIDVYEDF 413

Query: 419 GFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
                  +LS R      K   +D +W++A++++K  LD +       ++     GE AF
Sbjct: 414 NLTDYRFRLSYRDPKDTHKYYDNDEMWENAQSMLKAALDEMG------VDYFEAEGEAAF 467

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K A+G +    TIQ+DF LP RFN  Y+ +  E+  PVMIHR V  ++ERF
Sbjct: 468 YGPKLDIQVKTALGNEETLSTIQLDFLLPERFNLSYIGADGEEHRPVMIHRGVISTMERF 527

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINY 593
             I+IE +KG  P WL+P Q  V  I++   ++YA E+A  L+ H +  + D RNE + Y
Sbjct: 528 TAILIETYKGAFPTWLAPRQVTVIPISNEAHIDYAWEVAKTLRDHGIRADVDDRNEKMQY 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR     KIP  +I GDKE  ++S+ +RR+GS  T   ++   +  +  +
Sbjct: 588 KIRASQTSKIPYQLIVGDKEMQDKSVNVRRYGSKATHTEAISAFVDNILAD 638


>gi|302325997|gb|ADL25198.1| threonine--tRNA ligase [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 645

 Score =  649 bits (1674), Expect = 0.0,   Method: Composition-based stats.
 Identities = 295/655 (45%), Positives = 427/655 (65%), Gaps = 27/655 (4%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEI 61
           S I+LTFPDGS+++     TG ++A+SIS  LA+KA+ V +  KV DL+ P+ E G+I+I
Sbjct: 2   SQIELTFPDGSVRSVASGTTGLEIAKSISEGLARKALGVKLGDKVLDLNRPLTESGAIKI 61

Query: 62  ITP--EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           ITP  +DP +L ++RHSC+H++AEA+  ++P  ++A GP I+ GFYYD     P    + 
Sbjct: 62  ITPNNDDPDALMLLRHSCSHVLAEAICDLFPGTKLAYGPAIDKGFYYDLMTPTPIQQSDF 121

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEI----LESIPAKENVTLYR 175
            +IEK+M+EII  D PF++  +S E   +  E   + YK +     L    +   ++ Y 
Sbjct: 122 ERIEKRMKEIIKEDRPFVRCEVSAEDGLKRTE--GDKYKTDNAQRALAREGSDGTLSFYV 179

Query: 176 QGE----WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQEL 231
            GE    + DLC GPHV STG++K F K++ ++GAYW GD N   L+R+YGT +  ++ L
Sbjct: 180 TGEPGKNFEDLCAGPHVPSTGKLKNF-KVLSMSGAYWHGDQNSDQLTRVYGTCFADKEGL 238

Query: 232 TQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDD 290
             YL FLEE+EKRDHRK+ +EMDL+HI +   G++FWH KG K+   L  Y+R KI +  
Sbjct: 239 ETYLKFLEEAEKRDHRKIGKEMDLYHIEDHSPGMVFWHPKGTKMVNALKDYIRGKIDRRG 298

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH 350
           Y E+ TP+++++ LW +SGH D Y  NMF     D         A+KPMNCP H+ +FN 
Sbjct: 299 YLEVITPEIVNKTLWIKSGHADKYNENMFKTLAGDV------EMAVKPMNCPCHIQIFNT 352

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
           GL+S+R+LP+RLAEFG  +R EP+G++HGLMRVRGF QDDAH+FCT++Q+ +E      L
Sbjct: 353 GLRSWRDLPMRLAEFGKCHRYEPAGTMHGLMRVRGFVQDDAHIFCTEDQIASEVADFCAL 412

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
           +  IY DFGF+ I+VK STRPEKRVGSD +WD AE  +              ++  +  G
Sbjct: 413 VKEIYHDFGFDDIVVKFSTRPEKRVGSDEIWDKAEAALAEATKLAG------LDYILNPG 466

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           EGAFYGPK E+ LKD++GRDWQCGTIQVDFNLP R  A YV   ++K  PVM+HRA  GS
Sbjct: 467 EGAFYGPKLEFTLKDSLGRDWQCGTIQVDFNLPQRLGAEYVGKDNQKHIPVMLHRAAVGS 526

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
           IERF+GI+IE F G+ PLWL+P+QA V  I+   V+YA+++   L +  + +E D  NE 
Sbjct: 527 IERFLGILIEEFMGDFPLWLAPVQARVLPISEKFVDYAKQVEKELVNAGVRVEVDESNEK 586

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           + YKIR+  ++K+P ++I G+KE ++  + +R+        +++   + +  ++ 
Sbjct: 587 LGYKIRQCELQKVPYLLIVGEKEVADGVVSVRKRKDGDKGSMTVAQFLEMTAEDR 641


>gi|228987823|ref|ZP_04147932.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|229158179|ref|ZP_04286246.1| Threonyl-tRNA synthetase [Bacillus cereus ATCC 4342]
 gi|228625137|gb|EEK81897.1| Threonyl-tRNA synthetase [Bacillus cereus ATCC 4342]
 gi|228771871|gb|EEM20328.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 645

 Score =  649 bits (1674), Expect = 0.0,   Method: Composition-based stats.
 Identities = 251/654 (38%), Positives = 405/654 (61%), Gaps = 22/654 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           M   +K+TFPDG++K FP   T  ++A SIS  L KKAVA  +N ++ DL  P+  +G++
Sbjct: 1   MADVVKITFPDGAVKEFPKGVTTEEIAASISPGLKKKAVAGKLNDEMIDLVTPIEEDGAV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQ--VAIGPIIEDGFYYDFDKEQPFSSD 117
            IIT +    L ++RHS AH++A+A++ ++ +V+  + IGP+IE+GFYYD D E+  + +
Sbjct: 61  SIITLDSEDGLYILRHSTAHLLAQALKRLYKDVKVELGIGPVIENGFYYDIDMEEAITVE 120

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +  +IEK+MQ+I+  +   ++  +   +A   FE   +  K++++  +P    +++Y QG
Sbjct: 121 DFKKIEKEMQKIVNENLEIVRHEVPRAEAIRRFEEIGDELKLDLINDLPEDAVISIYEQG 180

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           E+FDLCRG H+ STG++K F KL+ VAGAYWRGDSN  ML RIYGTA+  + EL ++L  
Sbjct: 181 EFFDLCRGVHLPSTGKIKVF-KLLSVAGAYWRGDSNNKMLQRIYGTAFVKKAELDEHLRM 239

Query: 238 LEESEKRDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEIN 295
           LEE+++RDHRKL +E+ LF +  + G G+  W  KG  I + +  Y+  ++    Y+ + 
Sbjct: 240 LEEAKERDHRKLGKELKLFTNSQKVGQGLPLWLPKGATIRRIIERYIVDKEASLGYDHVY 299

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP +  + L++ SGHW+ YR  MF     D+         L+PMNCP H+ V+ + + SY
Sbjct: 300 TPVLGSRELYETSGHWNHYRDGMFPSMEMDN-----EELVLRPMNCPHHMMVYKNDIHSY 354

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+  E  ++ NL + +Y
Sbjct: 355 RELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVY 414

Query: 416 KDFGFEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
           KDFG E    +LS R      K    D +W+ A+ ++K  +D +       ++     GE
Sbjct: 415 KDFGLENYSFRLSYRDPADTKKYYADDEMWEKAQGMLKEAMDEMG------LDYYEAEGE 468

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
            AFYGPK +  ++ A+G+D    T+Q+DF LP RF   YV    ++  PV+IHR V  ++
Sbjct: 469 AAFYGPKLDVQVRTALGKDETLSTVQLDFLLPERFELAYVGEDGKQHRPVVIHRGVVSTM 528

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNET 590
           ERF+  +IE +KG  P WL+P+QA V  ++    ++YA+++ + L+   + +E D R E 
Sbjct: 529 ERFVAFLIEEYKGAFPTWLAPVQAQVIPVSPQVHLDYAKKVQDELRRAGIRVELDTREEK 588

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           I YKIRE  ++KIP +++ GD E +E  + +R++G   ++ ++L   + ++  E
Sbjct: 589 IGYKIREAQMQKIPYMLVVGDNEVTENGVNVRKYGEQKSETIALDAFVDMIKVE 642


>gi|146295981|ref|YP_001179752.1| threonyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
 gi|145409557|gb|ABP66561.1| Ser-tRNA(Thr) hydrolase [Caldicellulosiruptor saccharolyticus DSM
           8903]
          Length = 639

 Score =  649 bits (1674), Expect = 0.0,   Method: Composition-based stats.
 Identities = 282/644 (43%), Positives = 406/644 (63%), Gaps = 17/644 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEI 61
             + +T PDG I       +  D+ +SIS  L K+AVA  ING + DL  P+ +  S E+
Sbjct: 2   EKVNVTLPDGKIIEVEKSTSALDLVKSISMKLYKEAVACKINGILKDLWTPIDDDCSFEV 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           +T        V  H+ +HI+A++V+ ++ + V++ IGP I++GFYYDFD E+  + + L 
Sbjct: 62  VTFASDEGKRVYWHTTSHILAQSVKRLFGDKVKLGIGPAIDNGFYYDFDVEESITKELLE 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IE++MQ+II  D    +  LS E+A++L + + E YKVE++  IP  E ++ YRQGE+ 
Sbjct: 122 KIEEEMQKIIKEDLKIERFELSREEAKKLMQQRGENYKVELINDIPEGEIISFYRQGEFV 181

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLC GPH+ STG+VK F KL+ VAGAYWRG+S   ML R+YG ++  + +L +YL  LEE
Sbjct: 182 DLCTGPHLPSTGRVKAF-KLLSVAGAYWRGNSKNKMLQRVYGISYEKKSQLDEYLTMLEE 240

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQV 299
           +++RDHRKL RE+DLF I E G G  F+  KG  I   L  + R + K   Y+EI TP +
Sbjct: 241 AKRRDHRKLGRELDLFDIFEQGPGFPFFLPKGMIIRNILEDFWREEHKKRGYQEIKTPIM 300

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           L + LW QSGHWD Y+ NM+  K       D + FA+KPMNCPG + V+     SYRELP
Sbjct: 301 LTKDLWVQSGHWDHYKENMYFTKI------DDQEFAIKPMNCPGSILVYKRKSHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
            RL E G V+R+E SG LHGLMRVR FTQDDAH+F    Q+ +E   + +LI   Y  FG
Sbjct: 355 ERLCELGLVHRHELSGVLHGLMRVRCFTQDDAHIFMLPSQIKDEIKGVIDLIDYFYSVFG 414

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F+   V+LSTRPE  +G+D  W+ AE  +K  L+ +       IN  +  G+GAFYGPK 
Sbjct: 415 FKYH-VELSTRPENSMGTDEQWNMAETALKEALEEVG------INYKINEGDGAFYGPKI 467

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           ++ L+D++ R WQC TIQ+DF +P RF+ +Y+     K  PVM+HR VFGSIERFI I+ 
Sbjct: 468 DFHLEDSLKRTWQCATIQLDFQMPERFDLYYIGEDGAKHRPVMLHRVVFGSIERFIAILT 527

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E+F G  P+WL+PIQ  V  ++ +  +YA +I+  LK +   +E DFR+ET+ YKIR+  
Sbjct: 528 EHFAGAFPVWLAPIQIRVIPVSDNFNDYAAKISQTLKENGFRVEEDFRSETVGYKIRDAQ 587

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           ++KIP ++I G+KE  E +I +R          ++   + ++ +
Sbjct: 588 LQKIPYMVIVGEKERRENTIAVRDRKKGDLGSFTIDKFVSMVKE 631


>gi|118479724|ref|YP_896875.1| threonyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|118418949|gb|ABK87368.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Bacillus
           thuringiensis str. Al Hakam]
          Length = 646

 Score =  649 bits (1674), Expect = 0.0,   Method: Composition-based stats.
 Identities = 250/654 (38%), Positives = 404/654 (61%), Gaps = 22/654 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           M   +K+TFPDG++K FP   T  ++A SIS  L KKAVA  +N ++ DL  P+  +G++
Sbjct: 2   MADVVKITFPDGAVKEFPKGVTTEEIAASISPGLKKKAVAGKLNDEMIDLVTPIEEDGAV 61

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQ--VAIGPIIEDGFYYDFDKEQPFSSD 117
            IIT +    L ++RHS AH++A+A++ ++ +V+  + IGP+IE+GFYYD D E+  + +
Sbjct: 62  SIITLDSEDGLYILRHSTAHLLAQALKRLYKDVKVELGIGPVIENGFYYDIDMEEAITVE 121

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +  +IEK+MQ+I+  +   ++  +   +A   FE   +  K++++  +P    +++Y QG
Sbjct: 122 DFKKIEKEMQKIVNENLEIVRHEVPRAEAIRRFEEIGDELKLDLINDLPEDAVISIYEQG 181

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           E+FDLCRG H+ STG++K F KL+ VAGAYWRGDSN  ML RIYGTA+  + EL ++L  
Sbjct: 182 EFFDLCRGVHLPSTGKIKVF-KLLSVAGAYWRGDSNNKMLQRIYGTAFVKKAELDEHLRM 240

Query: 238 LEESEKRDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEIN 295
           LEE+++RDHRKL +E+ LF +  + G G+  W  KG  I + +  Y+  ++    Y+ + 
Sbjct: 241 LEEAKERDHRKLGKELKLFTNSQKVGQGLPLWLPKGATIRRIIERYIVDKEASLGYDHVY 300

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP +  + L++ SGHW+ YR  MF     D+         L+PMNCP H+ V+ + + SY
Sbjct: 301 TPVLGSRELYETSGHWNHYRDGMFPSMEMDN-----EELVLRPMNCPHHMMVYKNDIHSY 355

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+  E  ++ NL + +Y
Sbjct: 356 RELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVY 415

Query: 416 KDFGFEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
           KDFG E    +LS R      K    D +W+ A+ ++K  +D +       ++     GE
Sbjct: 416 KDFGLENYSFRLSYRDPEDTKKYYADDEMWEKAQGMLKEAMDEMG------LDYYEAEGE 469

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
            AFYGPK +  ++ A+G+D    T+Q+DF LP RF   YV    ++  PV+IHR V  ++
Sbjct: 470 AAFYGPKLDVQVRTALGKDETLSTVQLDFLLPERFELSYVGEDGKQHRPVVIHRGVVSTM 529

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNET 590
           ERF+  +IE +KG  P WL+P+Q  V  ++    ++YA+++ + L+   + +E D R E 
Sbjct: 530 ERFVAFLIEEYKGAFPTWLAPVQVQVIPVSPQVHLDYAKKVQDELRRAGIRVELDTREEK 589

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           I YKIRE  ++KIP +++ GD E +E  + +R++G   ++ ++L   + ++  E
Sbjct: 590 IGYKIREAQMQKIPYMLVVGDNEVTENGVNVRKYGEQKSETIALDAFVDMIKVE 643


>gi|228967672|ref|ZP_04128693.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228792048|gb|EEM39629.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str.
           T04001]
          Length = 645

 Score =  649 bits (1674), Expect = 0.0,   Method: Composition-based stats.
 Identities = 250/654 (38%), Positives = 404/654 (61%), Gaps = 22/654 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           M   +K+TFPDG++K FP   T  ++A SIS  L KKAVA  +N ++ DL  P+  +G++
Sbjct: 1   MADVVKITFPDGAVKEFPKGVTTEEIAASISPGLKKKAVAGKLNDEMIDLVTPIEEDGAV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV--AIGPIIEDGFYYDFDKEQPFSSD 117
            IIT +    L ++RHS AH++A+A++ ++ +V++   IGP+IE+GFYYD D E+  + +
Sbjct: 61  SIITLDSEDGLYILRHSTAHLLAQALKRLYKDVKLELGIGPVIENGFYYDIDMEEAITVE 120

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +  +IEK+MQ+I+  +   ++  +   +A   FE   +  K++++  +P    +++Y QG
Sbjct: 121 DFKKIEKEMQKIVNENLEIVRHEVPRAEALRRFEEISDELKLDLINDLPEDAVISIYEQG 180

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           E+FDLCRG H+ STG++K F KL+ VAGAYWRGDSN  ML RIYGTA+  + EL ++L  
Sbjct: 181 EFFDLCRGVHLPSTGKIKVF-KLLSVAGAYWRGDSNNKMLQRIYGTAFVKKAELDEHLRM 239

Query: 238 LEESEKRDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEIN 295
           LEE+++RDHRKL +E+ LF +  + G G+  W  KG  I + +  Y+  ++    Y+ + 
Sbjct: 240 LEEAKERDHRKLGKELKLFTNSQKVGQGLPLWLPKGATIRRIIERYIVDKEASLGYDHVY 299

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP +  + L++ SGHW+ YR  MF     D+         L+PMNCP H+ V+ + + SY
Sbjct: 300 TPVLGSRELYETSGHWNHYRDGMFPSMEMDN-----EELVLRPMNCPHHMMVYKNDIHSY 354

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+  E  ++ NL + +Y
Sbjct: 355 RELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVY 414

Query: 416 KDFGFEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
           KDFG E    +LS R      K    D +W+ A+ ++K  +D +       ++     GE
Sbjct: 415 KDFGLENYSFRLSYRDPADTKKYYADDEMWEKAQGMLKEAMDEMG------LDYYEAEGE 468

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
            AFYGPK +  ++ A+G+D    T+Q+DF LP RF   YV    ++  PV+IHR V  ++
Sbjct: 469 AAFYGPKLDVQVRTALGKDETLSTVQLDFLLPERFELTYVGEDGKQHRPVVIHRGVVSTM 528

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNET 590
           ERF+  +IE +KG  P WL+P+Q  V  ++    ++YA+++ + L+   + +E D R E 
Sbjct: 529 ERFVAFLIEEYKGAFPTWLAPVQVQVIPVSPQVHLDYAKKVQDELRRAGIRVELDTREEK 588

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           I YKIRE  ++KIP +++ GD E +E  + +R++G   ++ ++L   + ++  E
Sbjct: 589 IGYKIREAQMQKIPYMLVVGDNEVTENGVNVRKYGEQKSETIALDAFVDMIKVE 642


>gi|291085451|ref|ZP_06353132.2| threonine--tRNA ligase [Citrobacter youngae ATCC 29220]
 gi|291071041|gb|EFE09150.1| threonine--tRNA ligase [Citrobacter youngae ATCC 29220]
          Length = 622

 Score =  649 bits (1674), Expect = 0.0,   Method: Composition-based stats.
 Identities = 294/632 (46%), Positives = 422/632 (66%), Gaps = 16/632 (2%)

Query: 24  SDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMA 82
            DVA  I   LAK  +A  +NG++ D SD +  +  + IIT +D   L +IRHSCAH++ 
Sbjct: 1   MDVALDIGPGLAKATIAGRVNGELVDASDLIEHDAKLSIITAKDEEGLEIIRHSCAHLLG 60

Query: 83  EAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLS 142
            A++ +WP  ++AIGP++++GFYYD D ++  + +++  +EK+M E+  ++   +K+ +S
Sbjct: 61  HAIKQLWPHTKMAIGPVVDNGFYYDIDLDRTLTQEDVDALEKRMHELAEKNYDVIKKKVS 120

Query: 143 HEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLM 201
             +ARE F  + E YKV IL E+I   +   LY   E+ D+CRGPHV +      F KLM
Sbjct: 121 WYEARETFVKRGETYKVSILDENIAHDDKPGLYHHEEYVDMCRGPHVPNMRFCHHF-KLM 179

Query: 202 KVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED 261
           K AGAYWRGDSN  ML RIYGTAW  ++ L  YL  LEE+ KRDHRK+ +++DL+H+ E+
Sbjct: 180 KTAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEE 239

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
             G++FWH  GW IF+ L  ++R K+K+  Y+E+  P ++D+ LW+++GHWD+Y+  MF 
Sbjct: 240 APGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFT 299

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
                 T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+AEFGS +RNEPSG+LHGL
Sbjct: 300 ------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGL 353

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           MRVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  FGFEKI+VKLSTRPEKR+GSD +
Sbjct: 354 MRVRGFTQDDAHIFCTEEQIRDEVNACIRMVYDMYSTFGFEKIVVKLSTRPEKRIGSDEM 413

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDF 500
           WD AE  +   L+      ++ I     LGEGAFYGPK E+ L D + R WQCGT+Q+DF
Sbjct: 414 WDRAEADLAVALE------ENNIPFEFQLGEGAFYGPKIEFTLYDCLDRAWQCGTVQLDF 467

Query: 501 NLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTI 560
           +LPSR +A YV  ++E+  PVMIHRA+ GS+ERFIGI+ E F G  P WL+P+Q +V  I
Sbjct: 468 SLPSRLSASYVGENNERQVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVVMNI 527

Query: 561 TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
           T S  EY  E+   L++  + ++ D RNE I +KIREH+++++P +++CGDKE     + 
Sbjct: 528 TDSQSEYVNELTQKLQNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVA 587

Query: 621 IRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           +R         + + + I  L +E      Q+
Sbjct: 588 VRTRRGKDLGSLDVNEVIEKLQQEIRSRSLQQ 619


>gi|169828188|ref|YP_001698346.1| threonyl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
 gi|168992676|gb|ACA40216.1| Threonyl-tRNA synthetase 2 [Lysinibacillus sphaericus C3-41]
          Length = 637

 Score =  649 bits (1673), Expect = 0.0,   Method: Composition-based stats.
 Identities = 285/649 (43%), Positives = 424/649 (65%), Gaps = 23/649 (3%)

Query: 1   MPSD-IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGS 58
           M +  I + FPDG  + F    T +++A++I   L KKAVA ++NG + DL+ P+  +  
Sbjct: 1   MSNQVIHIQFPDGQQQAFTKGVTLTEIAQAIRPELRKKAVAGSVNGTIVDLTRPIMEDAQ 60

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           I +        + VIRHS AH++A+AV+ ++P  +  +GP+IE+GFYYD D     +  +
Sbjct: 61  ITLYDASSKEGIEVIRHSTAHLLAQAVKRLYPHARFGVGPVIENGFYYDIDIADTLTPSD 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L QIEK M++I+  +    ++ +S  +A++L     +A K+E+LESIPA E VT+Y QGE
Sbjct: 121 LQQIEKTMKQIVRENVQIKRREVSRNEAKKL--FAHDALKLELLESIPADETVTIYEQGE 178

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           ++DLCRG HV STG+++ F  +  V+GAYWRGDSN  ML RIYG A+ T++EL +Y  FL
Sbjct: 179 FYDLCRGSHVPSTGKLQHFQLMH-VSGAYWRGDSNNQMLQRIYGVAFATKEELQKYFVFL 237

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTP 297
           EE+EKR+HRKL +E+ LF  +E+  G+ F+   G  +   L SY+R  + K DY+E+ TP
Sbjct: 238 EEAEKRNHRKLGKELSLFMFSEEAPGMPFYLANGQILRNELESYLRNLQAKYDYQEVRTP 297

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +++Q LW+QSGHWD Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYR+
Sbjct: 298 LMMNQRLWEQSGHWDHYKDNMYFTQV------DNQSFALKPMNCPGHMLIFKNNLHSYRD 351

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFG V+R+E SG+L+GL+RVR F QDDAH+F T +Q+ +E     N+I  +Y  
Sbjct: 352 LPIRMAEFGQVHRHEFSGALNGLLRVRSFCQDDAHIFATPQQIEDEIALALNIIDEVYDV 411

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF+   V+LSTRP+  +G  ALWD AE  ++ VL  +       I+  +  G+GAFYGP
Sbjct: 412 FGFQYT-VELSTRPDDYMGELALWDQAEEALENVLLNLG------IDYTINEGDGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  +KDAI R  QC T+Q+DF LP +F+  Y+N H+EK  P++IHRAVFGSI+RF+GI
Sbjct: 465 KIDIHIKDAIQRSHQCATVQLDFQLPEKFDLTYINEHNEKVRPIVIHRAVFGSIDRFLGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE+F G  P+WL+P Q  V  +  +  +YA ++   L+   + ++ D R E +  KIRE
Sbjct: 525 LIEHFGGAFPIWLAPQQVQVIAVADAHQDYAIQVVKALQHEQIRVQIDDRQEKLGKKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
             + KIP II+ GD+E + +++ +RR G    Q+ S+   +  L KE  
Sbjct: 585 AQLHKIPYIIVIGDRETANQNVSVRRHG----QQASVEYTVSQLMKEIT 629


>gi|329724705|gb|EGG61211.1| threonine--tRNA ligase [Staphylococcus epidermidis VCU144]
          Length = 645

 Score =  649 bits (1673), Expect = 0.0,   Method: Composition-based stats.
 Identities = 258/650 (39%), Positives = 406/650 (62%), Gaps = 21/650 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           + I + FPDG+ K F    T  D+A+SIS  L KKAVA   NG++ DL+ P+  +G+IEI
Sbjct: 2   NQINIQFPDGNTKEFDKGTTTEDIAQSISPGLRKKAVAGKFNGQLVDLTRPLEQDGAIEI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           ITP    +L V+RHS AH+MA+A++ ++ +V+  +GP+IE GFYYDFD +   SSD+  +
Sbjct: 62  ITPGSEEALEVLRHSTAHLMAQALKRLYGDVKFGVGPVIEGGFYYDFDMDDKVSSDDFDK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK M++I+  +   +++ +S EKA++ F+   + YK+E++++IP  E+VTLY QGE+ D
Sbjct: 122 IEKTMKQIVNENHKIVREVVSKEKAKDFFK--DDPYKLELIDAIPEDESVTLYTQGEFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG HV ST ++K+F KL+  AGAYWRG+S+  ML RIYGTA+  +++L  +L  LEE 
Sbjct: 180 LCRGVHVPSTSKIKEF-KLLSTAGAYWRGNSDNKMLQRIYGTAFFDKKDLKAHLKMLEER 238

Query: 242 EKRDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
            +RDHRK+ ++++LF +    G+G+  W   G  I + +  Y+  +++   Y+ + TP +
Sbjct: 239 RERDHRKIGKDLELFTNNQLVGAGLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVL 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +  L++ SGHWD Y+ +MF     D+         L+PMNCP H+ ++ +   SYRELP
Sbjct: 299 ANVDLYKTSGHWDHYQEDMFPAMKLDED----EAMVLRPMNCPHHMMIYKNKPHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G+++R E SG++ GL RVRG T +D+H+F   +Q+  E  ++ N+I  +YKDFG
Sbjct: 355 IRIAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVNMIQDVYKDFG 414

Query: 420 FEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           F+    +LS R      K    D +W+ AE+++K   D +  + ++ I      GE AFY
Sbjct: 415 FKDYRFRLSYRDPEDKHKYFDDDEMWEKAESMLKEASDELGLTYEEAI------GEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G++    T Q+DF LP RF+  Y+    E+  PV+IHR V  ++ERF+
Sbjct: 469 GPKLDVQVKTAMGKEETLSTAQLDFLLPERFDLTYIGQDGEQHRPVVIHRGVVSTMERFV 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             + E  KG  P WL+P+Q  +  +      +YA+ + + LKS  + +E D RNE + YK
Sbjct: 529 AFLTEETKGAFPTWLAPMQVEIIPVNVDLHYDYARLLQDELKSQGVRVEIDDRNEKMGYK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IRE  +KKIP  I+ GD+E   + + +R++GS   + V   + I  +  E
Sbjct: 589 IREAQMKKIPYQIVVGDQEVENQEVNVRKYGSEKQESVEKDEFIWNVIDE 638


>gi|228475159|ref|ZP_04059885.1| threonine--tRNA ligase [Staphylococcus hominis SK119]
 gi|228270770|gb|EEK12172.1| threonine--tRNA ligase [Staphylococcus hominis SK119]
          Length = 645

 Score =  649 bits (1673), Expect = 0.0,   Method: Composition-based stats.
 Identities = 259/650 (39%), Positives = 406/650 (62%), Gaps = 21/650 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
             I + FPDG+ K+F    T  D+A+SIS  L KKAVA   N ++ DL+ P+  +G+IEI
Sbjct: 2   EQINIKFPDGNSKSFDKGTTTDDIAQSISPGLRKKAVAGKFNNQLVDLTRPLEEDGAIEI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +TP    +L V+RHS AH+MA+A++ I+ +V+  +GP+IE GFYYDFD ++  SSD+  +
Sbjct: 62  VTPGSDEALEVLRHSTAHLMAQALKRIYGDVKFGVGPVIEGGFYYDFDMDEKVSSDDFEK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK M++I+  +    ++ +S ++A++ F+   + YK+E++++IP  ENVTLY QGE+ D
Sbjct: 122 IEKTMKQIVNENYKIERKVVSRKEAKDFFK--DDPYKLELIDAIPEDENVTLYTQGEFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG HV ST ++K+F KL+  AGAYWRGDS+  ML RIYGTA+  +++L  +L  LEE 
Sbjct: 180 LCRGVHVPSTSKIKEF-KLLSTAGAYWRGDSDNKMLQRIYGTAFFDKKDLKAHLDMLEER 238

Query: 242 EKRDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
            +RDHR++ ++++LF +    G+G+  W   G  I + +  Y+  +++   Y+ + TP +
Sbjct: 239 RERDHRRIGKDLELFTNNQLVGAGLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVL 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +  L++ SGHWD YR +MF     D+T        L+PMNCP H+ V+N+   SYRELP
Sbjct: 299 ANVELYKTSGHWDHYRDDMFPPMKLDET----EEMVLRPMNCPHHMMVYNNKPHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G+++R E SG++ GL RVRG T +D+H+F   +Q+ +E  ++ ++I  +Y+DFG
Sbjct: 355 IRIAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKDEFKRVVHMIQDVYEDFG 414

Query: 420 FEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           FE    +LS R      K +  D +W+ AE+++K  +D +       +     +GE AFY
Sbjct: 415 FEDYTFRLSYRDPEDKEKYMDDDDMWNKAESMLKEAVDEMG------LPYVEAIGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G++    T Q+DF LP RF+  Y+ S  E   PV+IHR V  ++ERF+
Sbjct: 469 GPKLDVQVKTAMGKEETLSTAQLDFLLPERFDLSYIGSDGENHRPVVIHRGVVSTMERFV 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             + E  KG  P WL+P Q  +  +      +YA+ + + LKS  + +E D RNE + YK
Sbjct: 529 AFLTEETKGAFPTWLAPKQVEIIPVNVDLHYDYARNLQDELKSQGVRVEIDDRNEKMGYK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IRE  ++KIP  I+ GDKE     + +R++GS   + +   + I  L  E
Sbjct: 589 IREAQMQKIPYQIVVGDKEVENNEVNVRKYGSQDQETIERDEFIWNLVDE 638


>gi|225870895|ref|YP_002746842.1| threonyl-tRNA synthetase [Streptococcus equi subsp. equi 4047]
 gi|225700299|emb|CAW94574.1| threonyl-tRNA synthetase [Streptococcus equi subsp. equi 4047]
          Length = 655

 Score =  649 bits (1673), Expect = 0.0,   Method: Composition-based stats.
 Identities = 262/651 (40%), Positives = 405/651 (62%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            I +TFPDG+++ F    T  ++A+SIS+SLAKKA+A   NG++ D +  +  +GSIEII
Sbjct: 8   MITITFPDGAVREFESGVTTFEIADSISKSLAKKALAGKFNGQLIDTTRAIEEDGSIEII 67

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQ 121
           T +   +  V+RHS AH+ A+A + ++P++ + +GP I DGFYYD D  +   S+++L +
Sbjct: 68  TADHEDAFEVLRHSAAHLFAQAAKRLFPKLHLGVGPAIADGFYYDTDNADGQISNEDLPR 127

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKE-NVTLYRQGEWF 180
           IE++M++I+  + P +++ ++ E+A ELF+   + YKVE++         +T+YRQGE+ 
Sbjct: 128 IEEEMKKIVKENFPCIREEITKEEALELFK--DDPYKVELINEHADDAAGLTVYRQGEFV 185

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ R+YGTAW  +++L  YL  LEE
Sbjct: 186 DLCRGPHVPSTGRIRVFHLL-NVAGAYWRGNSDNNMMQRVYGTAWFDKKDLKAYLTRLEE 244

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           +++RDHRKL +E+DLF I+++   G+ FW   G  I +TL  Y+  +++   Y+ + TP 
Sbjct: 245 AKERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRTLERYITDKELASGYQHVYTPP 304

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L++ SGHW+ Y+ +MF          D   F L+PMNCP H+ V+ + + SYREL
Sbjct: 305 LASVELYKTSGHWEHYQEDMFPTMDMG----DGEEFVLRPMNCPHHIQVYKNHVHSYREL 360

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  T +D H+F T EQ+  E  +   LII +Y+DF
Sbjct: 361 PIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHLFVTPEQIQEEFQRALQLIIDVYEDF 420

Query: 419 GFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
                  +LS R      K   +D +W++A++++K  LD +        +     GE AF
Sbjct: 421 NLTDYRFRLSYRDPKDTHKYYDNDEMWENAQSMLKAALDEMGA------DYFEAEGEAAF 474

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K A+G +    TIQ+DF LP RFN  Y+ +  E+  PVMIHR V  ++ERF
Sbjct: 475 YGPKLDIQVKTALGNEETLSTIQLDFLLPERFNLSYIGADGEEHRPVMIHRGVISTMERF 534

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINY 593
             I+IE +KG  P WL+P Q  V  I++   ++YA E+A +L+ H +  + D RNE + Y
Sbjct: 535 TAILIETYKGAFPTWLAPRQVTVIPISNEAHIDYAWEVAKILRDHGIRADVDDRNEKMQY 594

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR     KIP  +I GDKE  ++S+ +RR+GS  T   ++   +  +  +
Sbjct: 595 KIRASQTSKIPYQLIVGDKEMQDKSVNVRRYGSKATHTEAISAFVDNILAD 645


>gi|259047194|ref|ZP_05737595.1| threonine--tRNA ligase [Granulicatella adiacens ATCC 49175]
 gi|259036244|gb|EEW37499.1| threonine--tRNA ligase [Granulicatella adiacens ATCC 49175]
          Length = 647

 Score =  649 bits (1673), Expect = 0.0,   Method: Composition-based stats.
 Identities = 254/650 (39%), Positives = 397/650 (61%), Gaps = 22/650 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            IK+TFPDG++K FP   T  +VAESIS+SLAKKA+A  +NG++ D    +  + SIEI+
Sbjct: 1   MIKITFPDGAVKEFPKGITVKEVAESISKSLAKKALAGKVNGELVDFDRSIEEDASIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TP+   +L ++RHS AH++A A+  ++P +   +GP IE GFYYD D     + D L ++
Sbjct: 61  TPDHEDALGILRHSTAHLLAHALTRLYPGIHFGVGPAIETGFYYDTDMPNQLTEDALPEV 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M +I+  + P +++ +S ++A E+     + YKVE++  +P  E +T+Y+Q ++ DL
Sbjct: 121 EAEMMKIVKENYPIVRREVSRKEALEI--FANDPYKVELINGLPEDETITVYQQEDFVDL 178

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRG HV STG+++ F KL+ +AGAYWRGDSN  M+ R+YGTA+  + +L ++L   EE++
Sbjct: 179 CRGIHVPSTGRIQVF-KLLSLAGAYWRGDSNNKMMQRVYGTAFFDKADLKEFLKMREEAK 237

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVL 300
           +RDHRKL +E+DLF I+++ GSG+ FW  KG  I +T+  Y+  ++I   Y+ + TP + 
Sbjct: 238 ERDHRKLGKELDLFMISQEVGSGLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPVMA 297

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D  L++ SGHW  Y+ +MF          D     L+PMNCP H+ V+ + + SYRELP+
Sbjct: 298 DVGLYKTSGHWAHYQEDMFPPMDMG----DGELLVLRPMNCPHHMMVYKNHIHSYRELPI 353

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  +I +LI  +Y DF  
Sbjct: 354 RIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRILDLIREVYSDFNV 413

Query: 421 EKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           +    +LS R      K    D +W+ AE ++K  +D +       +     +GE AFYG
Sbjct: 414 KDYRFRLSYRDPEDKHKYFDDDEMWNKAETMLKEAMDEMG------LEYFEAIGEAAFYG 467

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK-CHPVMIHRAVFGSIERFI 535
           PK +   + A+G +    TIQ+DF LP RF+  YV    +    PV+IHR V  + ERF+
Sbjct: 468 PKLDIQFRTAMGLEETMSTIQLDFLLPERFDLTYVGEDGDNTHRPVVIHRGVVSTAERFV 527

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAV-EYAQEIANLLKSHHLSIETDFRNETINYK 594
             +IE +KG  P WL+P+QA +  ++     + A+E+   +    + +E D RNE + YK
Sbjct: 528 AYLIEEYKGAFPTWLAPVQATIIPVSVEHHYDAARELKEKMARLGMRVELDDRNEKMGYK 587

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IR    +KIP  ++ GDKE  E ++ +RR+GS  T+ +S+   +  + +E
Sbjct: 588 IRASQTQKIPYQLVIGDKEVEEGTVTVRRYGSKETKSMSIEAYLEYVQRE 637


>gi|308513249|ref|YP_003474861.2| threonine--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5]
 gi|307346955|gb|ADC90325.2| threonine--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5]
          Length = 646

 Score =  648 bits (1672), Expect = 0.0,   Method: Composition-based stats.
 Identities = 269/642 (41%), Positives = 403/642 (62%), Gaps = 16/642 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +++T  DGS   F    + +++A  +S  LA+ A A  ++G++ DL   +  +  + I+T
Sbjct: 1   MQITLKDGSKIEFEQPMSIAEIARHLSEGLARVACAGEVDGELKDLRYVIDHDVHLNILT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D       RH+ +HI+A+AV+ ++P+ ++AIGP IE+GFYYDFD++ PF+ +EL  +E
Sbjct: 61  FDDEGGRHAFRHTASHILAQAVKRLYPDTKLAIGPAIENGFYYDFDRDHPFNDEELRALE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M++I+  + P     L  ++A  L E + E YKVE++  +PA   ++ Y QGE+ DLC
Sbjct: 121 AEMKKIVKENLPIKSFLLPRDEAIALMEKRGEPYKVELINDLPADAALSFYEQGEFVDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+ ST  VK F KL  +AGAYWRG     ML+RIYGTA+  Q +L  YL  LEE+++
Sbjct: 181 AGPHLASTKPVKAF-KLTSIAGAYWRGSEKNKMLTRIYGTAFPKQADLDDYLAKLEEAKR 239

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           RDHRKL +EM+LF  +E+G G  F+   G  +  TL+ Y R    ++DY EI+TP +L++
Sbjct: 240 RDHRKLGKEMNLFMFSEEGPGFPFFLPNGMILKNTLLDYWREVHRREDYREISTPIMLNR 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
           HLW+ SGHW  YR NM+       T+ D   FA+KPMNCPG +  F   + SYR+LP+RL
Sbjct: 300 HLWETSGHWFHYRDNMYT------TVIDDEDFAIKPMNCPGSMLTFKSTIHSYRDLPLRL 353

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AE G V+R+E SG LHGLMRVR FTQDDAH+F T +Q+ +E  ++  LI  +Y  F F+ 
Sbjct: 354 AELGLVHRHEKSGVLHGLMRVRAFTQDDAHIFMTPDQIRDEIKRVVRLIDEVYHHFNFKY 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
            + +LSTRPE  +G+D  W+ A   ++  ++ +K      I   +  G+GAFYGPK ++ 
Sbjct: 414 HI-ELSTRPEDSMGTDEEWNMATEALRLAVEDLK------IPYVINEGDGAFYGPKLDFH 466

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+D++GR WQCGTIQ+DF LP RF A Y+     +  P++IHR V GSIERFIGI+IE+ 
Sbjct: 467 LEDSLGRTWQCGTIQLDFQLPQRFEAEYIGPDGNRHRPIVIHRVVLGSIERFIGILIEHL 526

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P+Q  + +I+ +   Y  E+   LK+  +  E D RNE I +K+R   ++K
Sbjct: 527 AGKFPTWLAPVQVRILSISDNQNSYCSELLAELKNAGIRAEFDDRNEKIGFKVRAAQVEK 586

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IP ++I GD+E +E  + +R        ++   + I  +  E
Sbjct: 587 IPYMLIIGDQEMNEHRVSLRLRDRQENIQLPTAEFISKVVAE 628


>gi|57867165|ref|YP_188820.1| threonyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|251811076|ref|ZP_04825549.1| threonyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
 gi|282875897|ref|ZP_06284764.1| threonine--tRNA ligase [Staphylococcus epidermidis SK135]
 gi|71153576|sp|Q5HNM1|SYT_STAEQ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|57637823|gb|AAW54611.1| threonyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|251805411|gb|EES58068.1| threonyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
 gi|281294922|gb|EFA87449.1| threonine--tRNA ligase [Staphylococcus epidermidis SK135]
          Length = 645

 Score =  648 bits (1672), Expect = 0.0,   Method: Composition-based stats.
 Identities = 259/650 (39%), Positives = 406/650 (62%), Gaps = 21/650 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           + I + FPDG+ K F    T  D+A+SIS  L KKAVA   NG++ DL+ P+  +G+IEI
Sbjct: 2   NQINIQFPDGNTKEFDKGTTTEDIAQSISPGLRKKAVAGKFNGQLVDLTRPLEQDGAIEI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           ITP    +L V+RHS AH+MA+A++ ++ +V+  +GP+IE GFYYDFD +   SSD+  +
Sbjct: 62  ITPGSEEALEVLRHSTAHLMAQALKRLYGDVKFGVGPVIEGGFYYDFDMDDKVSSDDFDK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK M++I+  +   +++ +S EKA++ F+   + YK+E++++IP  E+VTLY QGE+ D
Sbjct: 122 IEKTMKQIVNENHKIVREVVSKEKAKDFFK--DDPYKLELIDAIPEDESVTLYTQGEFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG HV ST ++K+F KL+  AGAYWRG+S+  ML RIYGTA+  +++L  +L  LEE 
Sbjct: 180 LCRGVHVPSTSKIKEF-KLLSTAGAYWRGNSDNKMLQRIYGTAFFDKKDLKAHLKMLEER 238

Query: 242 EKRDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
            +RDHRK+ ++++LF +    G+G+  W   G  I + +  Y+  +++   Y+ + TP +
Sbjct: 239 RERDHRKIGKDLELFTNNQLVGAGLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVL 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +  L++ SGHWD Y+ +MF     D+         L+PMNCP H+ ++ +   SYRELP
Sbjct: 299 ANVDLYKTSGHWDHYQEDMFPAMKLDED----EAMVLRPMNCPHHMMIYKNKPHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G+++R E SG++ GL RVRG T +D+H+F   +Q+  E  ++ N+I  +YKDFG
Sbjct: 355 IRIAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVNMIQDVYKDFG 414

Query: 420 FEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           FE    +LS R      K    D +W+ AE+++K   D +  + ++ I      GE AFY
Sbjct: 415 FEDYRFRLSYRDPEDKHKYFDDDEMWEKAESMLKEASDELGLTYEEAI------GEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G++    T Q+DF LP RF+  Y+    E+  PV+IHR V  ++ERF+
Sbjct: 469 GPKLDVQVKTAMGKEETLSTAQLDFLLPERFDLTYIGQDGEQHRPVVIHRGVVSTMERFV 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             + E  KG  P WL+P+Q  +  +      +YA+ + + LKS  + +E D RNE + YK
Sbjct: 529 AFLTEETKGAFPTWLAPMQVEIIPVNIDLHYDYARLLQDELKSQGVRVEIDDRNEKMGYK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IRE  +KKIP  I+ GD+E   + + +R++GS   + V   + I  +  E
Sbjct: 589 IREAQMKKIPYQIVVGDQEVENQEVNVRKYGSEKQESVEKDEFIWNVIDE 638


>gi|172058202|ref|YP_001814662.1| threonyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
 gi|171990723|gb|ACB61645.1| threonyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
          Length = 646

 Score =  648 bits (1672), Expect = 0.0,   Method: Composition-based stats.
 Identities = 264/651 (40%), Positives = 406/651 (62%), Gaps = 21/651 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           S+I LTFPDG++K F    T  +VA SIS  L KKA A  +NG+V D   P+  +GSIE+
Sbjct: 2   SNIALTFPDGAVKEFTAGTTAEEVAASISPGLRKKAFAAKLNGQVIDYRRPIEEDGSIEL 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPE--VQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           + P+    L +IRHS AH+MA+A++ ++P+  + + IGP IE+GFYYD D E+  + ++L
Sbjct: 62  VMPDSEEGLDLIRHSSAHLMAQAIKRLYPDETIHLGIGPTIENGFYYDIDMERRLTEEDL 121

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IEK M +I   + P  ++ +S ++A  +++   +  K+E++ESIPA +++T YRQGE+
Sbjct: 122 PEIEKMMNKIAGENLPIEREVVSRDEALAVYQELNDPLKIELIESIPADQDLTFYRQGEF 181

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPHV +T +++ F KLM +AGAYWRGDS   ML RIYGTAW  + +L Q+L+FL 
Sbjct: 182 FDLCRGPHVPATAKLQVF-KLMSIAGAYWRGDSKNKMLQRIYGTAWANKDQLKQHLHFLA 240

Query: 240 ESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTP 297
           E+++RDHRKL +E+DLF  ++D   G+  W  KG  I +T+  Y+  ++++  YE + TP
Sbjct: 241 EAKERDHRKLGKELDLFFTSQDVGQGLPMWLPKGAAIRRTVERYIVDKELELGYEHVYTP 300

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    L++ SGHWD Y+ +MF     D+         L+PMNCP H+ ++ +  +SYR+
Sbjct: 301 VLGSVELYKTSGHWDHYQDDMFPKMEMDN-----EELVLRPMNCPHHMMIYKNEPRSYRD 355

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AE G ++R E SG+L GL RVR    +D H F   +QM  E   I +LI  +Y D
Sbjct: 356 LPLRVAELGGMHRYEMSGALTGLQRVRYMVLNDGHTFVRPDQMKEEFKAIVHLIQEVYAD 415

Query: 418 FGFEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           FG      +LS R      K   +DA+W+ A+  +K  +D ++      +      GE A
Sbjct: 416 FGITDYKFRLSYRDPADKEKYFDNDAIWEMAQRELKETMDELE------LPYFEAEGEAA 469

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  ++ A+G+D    T+Q+DF LP RF   Y  +  +   PV++HR V  ++ER
Sbjct: 470 FYGPKLDVQVRTALGKDETLSTVQLDFLLPERFELTYKGNDGQDHRPVVLHRGVVSTMER 529

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           F+  +IE +KG  P WL+P+Q  +  ++S   +YA+EI  +L    + +ETDFR+E + Y
Sbjct: 530 FVAYLIEEYKGAFPTWLAPVQVKLIPVSSVHEDYAREIKTMLLKKGIRVETDFRDEKLGY 589

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +IRE  + K+P++++ GDKE   R + IRR+GS  +   SL   +  L +E
Sbjct: 590 RIREAQVNKVPVMLVLGDKEIEAREVNIRRYGSKDSSNASLEQFVSDLEQE 640


>gi|153004735|ref|YP_001379060.1| threonyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
 gi|152028308|gb|ABS26076.1| threonyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
          Length = 681

 Score =  648 bits (1672), Expect = 0.0,   Method: Composition-based stats.
 Identities = 272/659 (41%), Positives = 387/659 (58%), Gaps = 18/659 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAE-SISRSLAKKAVAVAINGKVCDLSDPV-REGS 58
           M   +K+T PDGS K      T  D  + +I   LAK A    ++G+  DLS P+ R+  
Sbjct: 29  MSDLVKVTLPDGSQKEAARGTTVLDFVKTAIGPGLAKAAYFAKLDGEPVDLSRPLDRDAK 88

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           +E++T + P +L V RH  AH+MA  VQ ++P  QV IGP IEDGFYYDF +E PF+ ++
Sbjct: 89  LEVVTTKSPEALEVARHDAAHVMASVVQKLYPGTQVTIGPAIEDGFYYDFARETPFTPED 148

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPA--KENVTLYRQ 176
           L +IEK   E IA D PF++  +S + A  LFE   E YKVEI++ I A   + +TLYR 
Sbjct: 149 LEKIEKATNEAIAADLPFVRDEISMDAALGLFEGLGEKYKVEIVKDIAARGAKTLTLYRH 208

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           G+W D C GPH  ST ++    KL+ VAGAYWRGDS   ML RIYGTA+  ++EL  +L 
Sbjct: 209 GDWVDFCLGPHGPSTKRIGVV-KLLSVAGAYWRGDSRNAMLQRIYGTAFFDKKELEAHLA 267

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEIN 295
            +EE  KRDHRKL   + LF   E   G  FW   G  ++  L   MRR +    Y+E+ 
Sbjct: 268 RMEEVRKRDHRKLGPALGLFAFHEVAPGAAFWLPNGTTLYNVLEDAMRRLVSKGGYQEVK 327

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTI----KDLRTFALKPMNCPGHVAVFNHG 351
           TP + ++ LW+QSGHW  YR NMF V   +        +  + +LKPMNCP H  ++  G
Sbjct: 328 TPLLFNKRLWEQSGHWGVYRENMFLVFDKESDPALPVDERLSMSLKPMNCPSHHLIYKMG 387

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI 411
            +SYR+LP+R     +++RNE SGSL GL RVR F QDDAH++  + Q+  E  +I  L+
Sbjct: 388 KRSYRDLPIRYFTVDTLHRNELSGSLGGLTRVRQFAQDDAHLYLMESQIPEEVSRIVELM 447

Query: 412 ISIYKDFGFEKIMVK--LSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL 469
            ++Y  FG E  ++      +PE R+G DALWD AE  ++  LD I    Q      +  
Sbjct: 448 KTVYGAFGLEFSLLFSTRPVKPEDRIGDDALWDKAEGALRAALDRIGLPWQ------LNP 501

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG 529
           G+GAFYGPK ++++ D++GR WQ  TIQ+D+  P RF+  YV   + +  PV+IHRAV+G
Sbjct: 502 GDGAFYGPKIDFVVTDSLGRKWQTCTIQLDYAAPERFDLTYVGDDNHEHRPVVIHRAVYG 561

Query: 530 SIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE 589
           S ERFI I+ E++ G  P WL+P+QA V T++     +A+E+   L +    +E D  ++
Sbjct: 562 SFERFIAILTEHYAGAFPAWLAPVQARVVTVSDRFEGWAREVQAKLATAGWRVELDESSD 621

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
            +  KIR   + KIP  ++ G+KE   + +  RR G    + + L     +L +E  PP
Sbjct: 622 KLGAKIRNAQLAKIPFALVIGEKEVEAQGVAPRRHGGEDLKTMPLDAFEALLRREGTPP 680


>gi|301056082|ref|YP_003794293.1| threonyl-tRNA synthetase [Bacillus anthracis CI]
 gi|300378251|gb|ADK07155.1| threonyl-tRNA synthetase [Bacillus cereus biovar anthracis str. CI]
          Length = 645

 Score =  648 bits (1672), Expect = 0.0,   Method: Composition-based stats.
 Identities = 251/654 (38%), Positives = 405/654 (61%), Gaps = 22/654 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           M   +K+TFPDG++K FP   T  ++A SIS  L KKAVA  +N ++ DL  P+  +G++
Sbjct: 1   MADVVKITFPDGAVKEFPKGVTTEEIAASISPGLKKKAVAGKLNDEMIDLVTPIEEDGAV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQ--VAIGPIIEDGFYYDFDKEQPFSSD 117
            IIT +    L ++RHS AH++A+A++ ++ +V+  + IGP+IE+GFYYD D E+  + +
Sbjct: 61  SIITLDSEDGLYILRHSTAHLLAQALKRLYKDVKVELGIGPVIENGFYYDIDMEEAITVE 120

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +  +IEK+MQ+I+  +   ++  +   +A   FE   +  K++++  +P    +++Y QG
Sbjct: 121 DFKKIEKEMQKIVNENLEIVRHEVPRAEAIRRFEEIGDELKLDLINDLPEDAVISIYEQG 180

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           E+FDLCRG H+ STG++K F KL+ VAGAYWRGDSN  ML RIYGTA+  + EL ++L  
Sbjct: 181 EFFDLCRGVHLPSTGKIKVF-KLLSVAGAYWRGDSNNKMLQRIYGTAFVKKAELDEHLRM 239

Query: 238 LEESEKRDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEIN 295
           LEE+++RDHRKL +E+ LF +  + G G+  W  KG  I + +  Y+  ++    Y+ + 
Sbjct: 240 LEEAKERDHRKLGKELKLFTNSQKVGQGLPLWLPKGATIRRIIERYIVDKEASLGYDHVY 299

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP +  + L++ SGHW+ YR  MF     D+         L+PMNCP H+ V+ + + SY
Sbjct: 300 TPVLGSRELYETSGHWNHYRDGMFPSMEMDN-----EELVLRPMNCPHHMMVYKNDIHSY 354

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+  E  ++ NL + +Y
Sbjct: 355 RELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVY 414

Query: 416 KDFGFEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
           KDFG E    +LS R      K    D +W+ A+ ++K  +D +       ++     GE
Sbjct: 415 KDFGLENYSFRLSYRDPEDTKKYYADDEMWEKAQGMLKEAMDEMG------LDYYEAEGE 468

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
            AFYGPK +  ++ A+G+D    T+Q+DF LP RF   YV    ++  PV+IHR V  ++
Sbjct: 469 AAFYGPKLDVQVRTALGKDETLSTVQLDFLLPERFELAYVGEDGKQHRPVVIHRGVVSTM 528

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNET 590
           ERF+  +IE +KG  P WL+P+QA V  ++    ++YA+++ + L+   + +E D R E 
Sbjct: 529 ERFVAFLIEEYKGAFPTWLAPVQAQVIPVSPQVHLDYAKKVQDELRRAGIRVELDTREEK 588

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           I YKIRE  ++KIP +++ GD E +E  + +R++G   ++ ++L   + ++  E
Sbjct: 589 IGYKIREAQMQKIPYMLVVGDNEVTENGVNVRKYGEQKSETIALDAFVDMIKVE 642


>gi|213963363|ref|ZP_03391619.1| threonyl-tRNA synthetase [Capnocytophaga sputigena Capno]
 gi|213954031|gb|EEB65357.1| threonyl-tRNA synthetase [Capnocytophaga sputigena Capno]
          Length = 647

 Score =  648 bits (1672), Expect = 0.0,   Method: Composition-based stats.
 Identities = 256/649 (39%), Positives = 392/649 (60%), Gaps = 20/649 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            IK+T PDGS+K +    T + VA+SIS  LA+  ++ + NGK  +   P+  +GS+ + 
Sbjct: 1   MIKITLPDGSVKEYQSGITPAQVAQSISEGLARNVLSASFNGKTVESVTPLTTDGSLTLY 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQ 121
           T ++P       HS AHI+A+A++ ++P +++ IGP I +GFYYD D   +P S  +   
Sbjct: 61  TWDNPEGKKAFWHSSAHILAQALEELYPGIKLTIGPAIANGFYYDVDFNGKPISEKDFPA 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE K  EI      F  + +S  +A   +  K E YK E++E++     +T      + D
Sbjct: 121 IEAKFLEIARGKHEFKMRPVSKAEALSYYAGKNE-YKTELIEAL-EDGTITFCDHSTFTD 178

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG H+ +TG VK   K++  AGAYWRGD + P L+R+YG ++  Q+ELT+YL  LEE+
Sbjct: 179 LCRGGHIPNTGFVK-AVKVLSAAGAYWRGDEHNPQLTRVYGISFPKQKELTEYLELLEEA 237

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           +KRDHRKL +E++LF  +     G+  W  KG  + + L +++R+ + +  YE++ TP +
Sbjct: 238 KKRDHRKLGKELELFTFSNKVGQGLPLWLPKGAALRERLEAFLRKAQKQAGYEQVVTPHI 297

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             ++L+  SGHWD Y  + F       T  +   + LKPMNCP H  ++N    SY++LP
Sbjct: 298 GHKNLYVTSGHWDKYGKDSFQ---PIATPNEGEEYLLKPMNCPHHCEIYNSHPWSYKDLP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
            R AEFG+VYR E SG LHGL RVR FTQDDAH+FCT EQ+ +E   + +L++ ++   G
Sbjct: 355 KRFAEFGTVYRYEQSGELHGLTRVRCFTQDDAHIFCTPEQLDDEFKHVIDLVLYVFGSLG 414

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           F+    ++S R  +     +GSD  W  AEN +      I  + +  +N  +  GE AFY
Sbjct: 415 FDNFTAQVSLRDPENLSKYIGSDENWAKAENAI------INAAKEKGLNYVIETGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDA+GR WQ GTIQVD+NLP RF+ +Y  + +E   PVMIHRA FGS+ERF+
Sbjct: 469 GPKLDFMVKDALGRSWQLGTIQVDYNLPERFDLWYKGADNEMHRPVMIHRAPFGSMERFV 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            I++E+  GN PLWL+P QAI+ +++     YAQ++ +LL++  +    D R ET+  KI
Sbjct: 529 AILLEHTAGNFPLWLNPNQAIILSLSEKYENYAQKVLSLLENSDIRTLIDNRAETMGKKI 588

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           RE   +KIP ++I G+ E  E ++ +R+ G      +S+     ++  E
Sbjct: 589 REAETQKIPYMLIVGENEEKEGTVSVRKRGGEDLGSMSVEAFAKLINDE 637


>gi|229163567|ref|ZP_04291517.1| Threonyl-tRNA synthetase [Bacillus cereus R309803]
 gi|228619949|gb|EEK76825.1| Threonyl-tRNA synthetase [Bacillus cereus R309803]
          Length = 646

 Score =  648 bits (1672), Expect = 0.0,   Method: Composition-based stats.
 Identities = 251/654 (38%), Positives = 405/654 (61%), Gaps = 22/654 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           M   +K+TFPDG++K FP   T  ++A SIS  L KKAVA  +N ++ DL  P+  +G++
Sbjct: 2   MADVVKITFPDGAVKEFPKGVTTEEIAASISPGLKKKAVAGKLNDEMIDLVTPIEEDGAV 61

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQ--VAIGPIIEDGFYYDFDKEQPFSSD 117
            IIT +    L ++RHS AH++A+A++ ++ +V+  + IGP+IE+GFYYD D E+  + +
Sbjct: 62  SIITLDSEDGLYILRHSTAHLLAQALKRLYKDVKVELGIGPVIENGFYYDIDMEEAITVE 121

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +  +IEK+MQ+I+  +   ++  +   +A   FE   +  K++++  +P    +++Y QG
Sbjct: 122 DFKKIEKEMQKIVNENLEIVRHEVPRAEAIRRFEEIGDELKLDLINDLPEDAVISIYEQG 181

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           E+FDLCRG H+ STG++K F KL+ VAGAYWRGDSN  ML RIYGTA+  + EL ++L  
Sbjct: 182 EFFDLCRGVHLPSTGKIKVF-KLLSVAGAYWRGDSNNKMLQRIYGTAFVKKAELDEHLRM 240

Query: 238 LEESEKRDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEIN 295
           LEE+++RDHRKL +E+ LF +  + G G+  W  KG  I + +  Y+  ++    Y+ + 
Sbjct: 241 LEEAKERDHRKLGKELKLFTNSQKVGQGLPLWLPKGATIRRIIERYIVDKEASLGYDHVY 300

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP +  + L++ SGHW+ YR  MF     D+         L+PMNCP H+ V+ + + SY
Sbjct: 301 TPVLGSRELYETSGHWNHYRDGMFPSMEMDN-----EELVLRPMNCPHHMMVYKNDIHSY 355

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+  E  ++ NL + +Y
Sbjct: 356 RELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVY 415

Query: 416 KDFGFEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
           KDFG E    +LS R      K    D +W+ A+ ++K  +D +       ++     GE
Sbjct: 416 KDFGLENYSFRLSYRDPADTKKYYADDEMWEKAQGMLKEAMDEMG------LDYYEAEGE 469

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
            AFYGPK +  ++ A+G+D    T+Q+DF LP RF   YV    ++  PV+IHR V  ++
Sbjct: 470 AAFYGPKLDVQVRTALGKDETLSTVQLDFLLPERFELAYVGEDGKQHRPVVIHRGVVSTM 529

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNET 590
           ERF+  +IE +KG  P WL+P+QA V  ++    ++YA+++ + L+   + +E D R E 
Sbjct: 530 ERFVAFLIEEYKGAFPTWLAPVQAQVIPVSPQVHLDYAKKVQDELRRAGIRVELDTREEK 589

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           I YKIRE  ++KIP +++ GD E +E  + +R++G   ++ ++L   + ++  E
Sbjct: 590 IGYKIREAQMQKIPYMLVVGDNEVTENGVNVRKYGEQKSETIALAAFVDMIKVE 643


>gi|144899402|emb|CAM76266.1| Threonyl-tRNA synthetase [Magnetospirillum gryphiswaldense MSR-1]
          Length = 638

 Score =  648 bits (1672), Expect = 0.0,   Method: Composition-based stats.
 Identities = 326/648 (50%), Positives = 447/648 (68%), Gaps = 14/648 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEII 62
            + +T PDGS++ FP   TG DVA+SI   LAK A+A+ I+G + DL+  +     + I+
Sbjct: 1   MVAITLPDGSVREFPGPVTGLDVAKSIGAGLAKAALAIRIDGVMKDLTTTLTTDCKLAIV 60

Query: 63  TPED-PRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           T +D   +L ++RH  AH+MAEAV+ ++PE QV IGP IE+GFYYDF +  PF  ++L +
Sbjct: 61  TAKDGADALELLRHDAAHVMAEAVKELYPETQVTIGPSIENGFYYDFARPTPFGPEDLEK 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE +M+EI+ RD    ++  + + A   FE   E YK EI+ SIPA + + LYRQG + D
Sbjct: 121 IEARMREIVDRDEAITREEWNRDDAVAFFEGLGEKYKAEIIASIPADQPIGLYRQGNFID 180

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ ST ++ K FKLMK+AGAYWRGDS   ML RIYGTAW  +++L  YL+ LEE+
Sbjct: 181 LCRGPHLPSTAKLGKAFKLMKLAGAYWRGDSRNEMLQRIYGTAWFDKKDLDSYLHMLEEA 240

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVL 300
           EKRDHR+L REM+LFH+ E+  G +FWH+KGW +++T+ SYMR +++ ++Y+E+ TPQ++
Sbjct: 241 EKRDHRRLGREMNLFHLQEEAVGAVFWHQKGWALYRTVESYMRNRLEAENYQEVKTPQLV 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D  LW+ SGH D +  +MF +K  D+     R  A+KPMNCP HV +F  G+KSYR+LP+
Sbjct: 301 DFSLWEASGHADKFSESMFTIKTQDE-----RHLAVKPMNCPCHVQIFRQGIKSYRDLPL 355

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AEFGS +R EPSG+LHG+MRVR FTQDDAH+FCT++Q+ +E +    L+  +Y+DFGF
Sbjct: 356 RMAEFGSCHRYEPSGALHGIMRVRAFTQDDAHIFCTEDQITSETIAFCQLLKLVYQDFGF 415

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
             + VK S RPEKR GSD  WD      K     +  +    + T +  GEGAFYGPK E
Sbjct: 416 TDVRVKFSDRPEKRAGSDETWD------KAESALLAAAQAAGLETTLNPGEGAFYGPKLE 469

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           ++L+DAIGRDWQCGT+QVDF LP R +A Y      +  PVM+HRAV GS ERFIGI+IE
Sbjct: 470 FVLRDAIGRDWQCGTLQVDFVLPERLDASYTAEDGSRRRPVMLHRAVLGSFERFIGILIE 529

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           NF G  PLWLSPIQ +V TI S A +YAQ +A  L+   L +ETD RNE IN K+ EHS 
Sbjct: 530 NFAGRFPLWLSPIQVVVATIVSDADDYAQSVAAKLRGAGLRVETDLRNEKINKKVAEHSN 589

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
            K+P++++ G +EA E ++ +RR GS   + ++L  A+  L  E+ PP
Sbjct: 590 AKVPVLLVVGRREAEEGTVAVRRLGSQGQEFLALDQALATLVNEAAPP 637


>gi|229543582|ref|ZP_04432642.1| threonyl-tRNA synthetase [Bacillus coagulans 36D1]
 gi|229328002|gb|EEN93677.1| threonyl-tRNA synthetase [Bacillus coagulans 36D1]
          Length = 640

 Score =  648 bits (1671), Expect = 0.0,   Method: Composition-based stats.
 Identities = 262/652 (40%), Positives = 416/652 (63%), Gaps = 23/652 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           M   +K+TFPDG++K FP   T  ++A+SIS  L KKA+A  +NGK+ DL  P+  +G+I
Sbjct: 1   MAEIVKITFPDGALKEFPFGTTTEEIAQSISPGLRKKALAGKLNGKLLDLRTPIEEDGAI 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EI+TPE   +L ++RHS AH+MA+AV+ ++  V+  +GP IE+GFYYD D E   + ++L
Sbjct: 61  EIVTPEHEDALGILRHSTAHLMAQAVRRLYGNVKFGVGPAIENGFYYDMDLEVSLTPEDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IEK+M++I+A +   +++ +S ++AR++     + YK+E++++IP  E VT+Y QGE+
Sbjct: 121 PKIEKEMKKIVAENLEIVRKVVSRDEARKM--FAHDEYKLELIDAIP-DETVTVYEQGEF 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRG HV STG++K+F KL+ +AGAYWRGDSN  M+ RIYGTA+  +++L  +L FLE
Sbjct: 178 VDLCRGVHVPSTGKIKEF-KLLNIAGAYWRGDSNNKMMQRIYGTAFFKKEDLEAHLKFLE 236

Query: 240 ESEKRDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTP 297
           E+++RDHRK+ +E++LF +  + G G+  W  KG  I +T+  Y+  +++K  Y+ + TP
Sbjct: 237 EAKERDHRKIGKELELFTNSQKVGQGLPLWLPKGATIRRTIERYIVDKEVKLGYDHVYTP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    L++ SGHWD Y+ +MF V   D+         L+PMNCP H+ V+ + + SYRE
Sbjct: 297 VLGSVDLYKTSGHWDHYQEDMFPVMKMDN-----EELVLRPMNCPHHMMVYKNTIHSYRE 351

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AE G ++R E SG+L GL RVRG T +DAH+F   +Q+  E  ++  LI+ +YKD
Sbjct: 352 LPIRIAELGLMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEEFKRVVELILEVYKD 411

Query: 418 FGFEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           F       +LS R      K    D +W+ A+ ++K  +D          +     GE A
Sbjct: 412 FNITDYSFRLSYRDPENTDKYYDDDEMWNKAQAMLKETMDDFG------FDYYEAEGEAA 465

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  ++ A+G+D    T+Q+DF LP RF+  YV    +   PV+IHR V  ++ER
Sbjct: 466 FYGPKLDVQVRTALGKDETLSTVQLDFLLPERFDLTYVGEDGKPHRPVVIHRGVVSTMER 525

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETIN 592
           F+  +IE +KG  P WL+PIQ  V  ++     +YA+++   LK+  +  E D R+E + 
Sbjct: 526 FVAYLIEEYKGAFPTWLAPIQVQVIPVSPDAHYDYARKVQEALKAEGVRAELDARDEKLG 585

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           Y+IRE  ++KIP  +I GD+EA++ ++ +R++G   T+ V +   +  + +E
Sbjct: 586 YRIREAQVQKIPYALIVGDQEATDNAVNVRKYGEKQTETVPVDTFLSKIKEE 637


>gi|258512139|ref|YP_003185573.1| threonyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257478865|gb|ACV59184.1| threonyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 648

 Score =  648 bits (1671), Expect = 0.0,   Method: Composition-based stats.
 Identities = 252/651 (38%), Positives = 396/651 (60%), Gaps = 20/651 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
           M  ++ +   DGS +  P  +T +++A+SIS  L K+AV   +NG + DLS  V +G+ +
Sbjct: 1   MSQEVTVRLKDGSERRVPAGSTYAELAQSISPRLGKEAVVARVNGALVDLSREVEDGAQV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           E++T +DP  L V+RH+CAH+MA+AVQ ++P  + AIGP+IE+GFYYDF  +  F  ++L
Sbjct: 61  ELLTLQDPEGLYVMRHTCAHVMAQAVQRLFPGTKCAIGPVIENGFYYDFA-DHDFHPEDL 119

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IE++M+ IIA D P  ++ +S E+A   F  + + +KVEI+E +P    +TLYRQGE+
Sbjct: 120 PRIEEEMKRIIAEDLPIHREVVSREEALRFFRDRGDRFKVEIIEDLPEDVTLTLYRQGEF 179

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPH+ STG++K F      AGAYWRGDS R ML+R+YG A+  + +L +Y    +
Sbjct: 180 VDLCRGPHLPSTGRIKVFQLQ-NFAGAYWRGDSKREMLTRVYGVAFAKKSDLDEYNRLQQ 238

Query: 240 ESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTP 297
           E+ +RDHR+L +E+++F ++ +   G+  W   G KI + +  Y+   +    Y+ + TP
Sbjct: 239 EARERDHRRLGKELEIFTLSPEVGQGLPLWLPNGAKIRRIIERYIVDLEESLGYQHVYTP 298

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  L++ SGHW+ Y+ +M+     D+         L+PMNCP H+ V+ H L SYRE
Sbjct: 299 HLANVELYKISGHWEHYKDDMYPPMKIDN-----EELVLRPMNCPHHMMVYKHRLHSYRE 353

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AE G+++R E SG+L GL RVR  T +DAH+FC  +Q+  E   +  LI  +YKD
Sbjct: 354 LPIRIAELGTMHRYEMSGALAGLQRVRAMTLNDAHIFCRPDQIEQEFTGVVRLIQRVYKD 413

Query: 418 FGFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           FG +    +LS R  K     V +D +W+ A++ ++ V+  +       +      GE A
Sbjct: 414 FGIDDYYHRLSYRDPKNTEKYVQNDEMWELAQSTLRKVMLDLG------LEFVEAEGEAA 467

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  ++ A+G+D    TIQ+DF+LP+RFN  YV    E+  PV+IHR V G++ER
Sbjct: 468 FYGPKLDVQVRTALGKDETLSTIQLDFHLPNRFNLEYVGEDGERHRPVVIHRGVVGTMER 527

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           F+  +IE +KG  P WL+P Q +V ++      YA+E+A  L+   +  E D  +  I Y
Sbjct: 528 FVAFLIEQYKGAFPTWLAPTQVVVASVADEFAGYAEEVAAKLRELGIRAEADVSDNKIGY 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR+    KIP  ++ G +E  E S+ +R++ +     + L   +  +  E
Sbjct: 588 KIRQAQTHKIPYTLVVGAREREEGSVSVRKYQAGDLGAMPLDQFVRQIQDE 638


>gi|315225228|ref|ZP_07867045.1| threonine--tRNA ligase [Capnocytophaga ochracea F0287]
 gi|314944911|gb|EFS96943.1| threonine--tRNA ligase [Capnocytophaga ochracea F0287]
          Length = 646

 Score =  648 bits (1671), Expect = 0.0,   Method: Composition-based stats.
 Identities = 257/649 (39%), Positives = 392/649 (60%), Gaps = 20/649 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            IK+T PDGS+K +    T +++A SIS  LA+  ++ + NGK  +   P+  +GS+ + 
Sbjct: 1   MIKITLPDGSVKEYQSGITPAEIAASISEGLARNVLSASFNGKTIETVTPLTTDGSLTLY 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQ 121
           T + P       HS AHI+A+A++ ++P +++ IGP I +GFYYD D   +P S  +   
Sbjct: 61  TWDSPEGKKAFWHSSAHILAQALEELYPGIKLTIGPAIANGFYYDVDFNGKPISEKDFPA 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE K  EI     PF  + +S  +A  L+ + K  YK E++E++     +T      + D
Sbjct: 121 IEAKFLEIARGKHPFKMRPVSKAEAL-LYYAGKNEYKTELIEAL-EDGTITFCDHSTFTD 178

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG H+ +TG VK   K++  AGAYWRGD + P L+R+YG ++  Q+ELT+YL  LEE+
Sbjct: 179 LCRGGHIPNTGFVK-AVKVLSAAGAYWRGDEHNPQLTRVYGISFPKQKELTEYLELLEEA 237

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           +KRDHRKL +E++LF  +     G+  W  KG  + + L +++R+ + +  YE++ TP +
Sbjct: 238 KKRDHRKLGKELELFTFSNKVGQGLPLWLPKGAALRERLEAFLRKAQKQAGYEQVVTPHI 297

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             ++L+  SGHWD Y  + F       T  +   + LKPMNCP H  ++N    SY++LP
Sbjct: 298 GHKNLYVTSGHWDKYGKDSFQ---PIATPNEGEEYLLKPMNCPHHCEIYNSHPWSYKDLP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
            R AEFG+VYR E SG LHGL RVR FTQDDAH+FCT EQ+ +E   + +L++ ++   G
Sbjct: 355 KRFAEFGTVYRYEQSGELHGLTRVRCFTQDDAHIFCTPEQLDDEFKHVIDLVLYVFGSLG 414

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           F+    ++S R  +     +GSD  W  AEN +      I  + +  ++  +  GE AFY
Sbjct: 415 FDNFTAQVSLRDPENPTKYIGSDENWAKAENAI------INAAKEKGLSYVIETGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDA+GR WQ GTIQVD+NLP RF+ +Y  + +E   PVMIHRA FGS+ERF+
Sbjct: 469 GPKLDFMVKDALGRSWQLGTIQVDYNLPERFDLWYKGADNEMHRPVMIHRAPFGSMERFV 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            I++E+  GN PLWL+P QAIV +++     YAQ++  LL++  +    D R ET+  KI
Sbjct: 529 AILLEHTAGNFPLWLNPSQAIVLSLSEKYENYAQKVLRLLENSDIRTLIDNRAETMGKKI 588

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           RE   KKIP ++I G+ E  E ++ +R+ G      +S+     ++  E
Sbjct: 589 REAETKKIPYMLIVGENEEKEGTVSVRKRGGEDLGSMSVEAFAKLINDE 637


>gi|315641145|ref|ZP_07896224.1| threonine--tRNA ligase [Enterococcus italicus DSM 15952]
 gi|315483153|gb|EFU73670.1| threonine--tRNA ligase [Enterococcus italicus DSM 15952]
          Length = 650

 Score =  648 bits (1671), Expect = 0.0,   Method: Composition-based stats.
 Identities = 257/651 (39%), Positives = 396/651 (60%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            IK+TFPDG++K F    T  ++AESIS+SL KKA+A  +NGK+ DL+ P+  +  IEI+
Sbjct: 1   MIKITFPDGAVKEFEQGVTTKEIAESISKSLVKKALAGKVNGKLVDLTLPLEEDAKIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
           TP+   +L ++RHS AH+MA A+  ++P +   +GP I+ GFYYD D  E P ++++L  
Sbjct: 61  TPDHEDALPLLRHSSAHLMAHAMHRLYPGIHFGVGPAIDSGFYYDTDNGEHPITAEDLPA 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE +M ++I  + P  +  LS E+A EL     + YKVE++  +PA E +T Y+QG++ D
Sbjct: 121 IEVEMMKVIKENHPIERMVLSKEEALEL--FASDPYKVELITELPADEVITAYKQGDFVD 178

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG+++ F KL+ VAGAYWRG S+  M+ RIYGTA+  +++L +++   EE+
Sbjct: 179 LCRGPHVPSTGRIQVF-KLLSVAGAYWRGKSDNHMMQRIYGTAFFDKKDLKEFIRMREEA 237

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF ++++ GSG+ FW  KG  I + +  Y+  +++   Y  + TP +
Sbjct: 238 KERDHRKLGKELDLFMVSKEVGSGLPFWLPKGATIRRIIERYIVDKEVSLGYMHVYTPIM 297

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            D +L++ SGHWD Y  +MF          D     L+PMNCP H+ V+ + + SYRELP
Sbjct: 298 ADVNLYKTSGHWDHYHEDMFPPMDMG----DGEMLVLRPMNCPHHIMVYKNDIHSYRELP 353

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  T +D H F   +Q+  E  +  +L+ ++YKDFG
Sbjct: 354 IRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKEEFKRTLDLMTAVYKDFG 413

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
            +    +LS R           D +W++A+ ++K  +D +       ++     GE AFY
Sbjct: 414 IDDYRFRLSYRDPNNTDKYFDDDKMWENAQKMIKAAMDELG------LDYFEAEGEAAFY 467

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK-CHPVMIHRAVFGSIERF 534
           GPK +  +K A+G +    TIQ+DF LP RF   YV    E    PVMIHR +  ++ERF
Sbjct: 468 GPKLDVQVKTALGMEETLSTIQLDFLLPERFELTYVGEDGENSHRPVMIHRGIVSTMERF 527

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           +  + E +KG  P WL+P+Q  +  ++  +  EYA E+   L    +  E D RNE + Y
Sbjct: 528 VAYLTEVYKGAFPTWLAPVQVEIIPVSVDAHSEYAYEVKERLLEKGIRAEVDGRNEKMGY 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR    +KIP  ++ GD+E ++ ++ IRR+GS  T    L   +  +  +
Sbjct: 588 KIRAAQTQKIPYQLVVGDQEMNDATVNIRRYGSKETAVEELNMFVDAIVAD 638


>gi|218288925|ref|ZP_03493176.1| threonyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1]
 gi|218241014|gb|EED08191.1| threonyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1]
          Length = 648

 Score =  648 bits (1671), Expect = 0.0,   Method: Composition-based stats.
 Identities = 252/651 (38%), Positives = 395/651 (60%), Gaps = 20/651 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
           M  +I +   DGS +  P  +T + +A+SIS  L K+AV   +NG + DLS  V +G+ +
Sbjct: 1   MSHEITVRLKDGSERRVPAGSTYAQLAQSISPRLGKEAVVARVNGALVDLSREVEDGAQV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           E++T +DP  L V+RH+CAH+MA+AVQ ++P  + AIGP+IE+GFYYDF  +  F  ++L
Sbjct: 61  ELLTLQDPEGLYVMRHTCAHVMAQAVQRLFPGTKCAIGPVIENGFYYDFA-DHDFHPEDL 119

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IE++M+ IIA D P  ++ +S E+A   F  + + +KVEI+E +P    +TLYRQGE+
Sbjct: 120 PRIEEEMKRIIAEDLPIHREVVSREEALRFFRDRGDRFKVEIIEDLPVDVTLTLYRQGEF 179

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPH+ STG++K F      AGAYWRGDS R ML+R+YG A+  + +L +Y    +
Sbjct: 180 VDLCRGPHLPSTGRIKVFQLQ-NFAGAYWRGDSKREMLTRVYGVAFAKKSDLDEYNRLQQ 238

Query: 240 ESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTP 297
           E+ +RDHR+L +E+++F ++ +   G+  W   G KI + +  Y+   +    Y+ + TP
Sbjct: 239 EARERDHRRLGKELEIFTLSPEVGQGLPLWLPNGAKIRRIIERYIVDLEESLGYQHVYTP 298

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  L++ SGHW+ Y+ +M+     D+         L+PMNCP H+ V+ H L SYRE
Sbjct: 299 HLANVELYKISGHWEHYKDDMYPPMKIDN-----EELVLRPMNCPHHMMVYKHRLHSYRE 353

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AE G+++R E SG+L GL RVR  T +DAH+FC  +Q+  E   +  LI  +YKD
Sbjct: 354 LPIRIAELGTMHRYEMSGALAGLQRVRAMTLNDAHIFCRPDQIEQEFTGVVRLIQRVYKD 413

Query: 418 FGFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           FG +    +LS R  K     V +D +W+ A++ ++ V+  +       +      GE A
Sbjct: 414 FGIDDYYHRLSYRDPKNTEKYVQNDEMWELAQSTLRKVMLDLG------LEFVEAEGEAA 467

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  ++ A+G+D    TIQ+DF+LP+RFN  YV    E+  PV+IHR V G++ER
Sbjct: 468 FYGPKLDVQVRTALGKDETLSTIQLDFHLPNRFNLEYVGEDGERHRPVVIHRGVVGTMER 527

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           F+  +IE +KG  P WL+P Q +V ++      YA+E+A  L+   +  E D  +  I Y
Sbjct: 528 FVAFLIEQYKGAFPTWLAPTQVVVASVADEFAGYAEEVAAKLRELGIRAEADVSDNKIGY 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR+    KIP  ++ G +E  E ++ +R++ +     + L   +  +  E
Sbjct: 588 KIRQAQTHKIPYTLVVGAREREEGTVSVRKYHAGDLGVMPLDQFVRQIQDE 638


>gi|325103180|ref|YP_004272834.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Pedobacter
           saltans DSM 12145]
 gi|324972028|gb|ADY51012.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Pedobacter
           saltans DSM 12145]
          Length = 642

 Score =  648 bits (1671), Expect = 0.0,   Method: Composition-based stats.
 Identities = 262/649 (40%), Positives = 404/649 (62%), Gaps = 19/649 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            IK+T PDGS++ +    T   +A SIS  LA+  +A  +NG+V D S P+  + +++++
Sbjct: 1   MIKITLPDGSVREYEKGTTAHQIALSISEGLARNVLAAEVNGEVWDSSRPIEHDATVKLL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
           T  D    +   HS AH++AEA+++++P  +  IGP IE GFYYD D  ++ FSSD+L +
Sbjct: 61  TWNDDEGKSTFWHSSAHLLAEALEALYPGTKFGIGPAIETGFYYDVDFGDRDFSSDDLRK 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE KM E+      F ++ +S   A   F  K + YK+++++ +     +T Y QG + D
Sbjct: 121 IEDKMLELAKTKETFERKAVSKSDALAYFTEKGDEYKLDLIKDL-EDGKITFYSQGNFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+  TG +K   KL  VAGAYWRGD +R  L+RIYG ++  Q ELT+Y+  +EE+
Sbjct: 180 LCRGPHIPHTGFIK-ALKLTNVAGAYWRGDESRKQLTRIYGVSFPKQSELTEYIQRIEEA 238

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           +KRDHRKL +E++LF  +E    G+  W  KG  + + L+S++++ + K  Y+++ TP +
Sbjct: 239 KKRDHRKLGKELELFTFSEKVGLGLPLWLPKGTALRERLVSFLQKAQQKAGYDQVITPHI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             ++L+  SGH+D Y A+ F       T ++   F LKPMNCP H  ++    +SY++LP
Sbjct: 299 GHKNLYITSGHYDKYGADSFQ---PIKTPQEGEEFFLKPMNCPHHCEIYKSKPRSYKDLP 355

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           VRLAEFG+VYR E SG LHGL RVRGFTQDDAH+FC  +Q+  E  K+ +L++ ++K  G
Sbjct: 356 VRLAEFGTVYRYEQSGELHGLTRVRGFTQDDAHLFCRPDQVKEEFKKVIDLVLYVFKALG 415

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           F++ + ++S R  +     +GSD  W      +      I+ +++  + T V  GE AFY
Sbjct: 416 FDEYIAQVSLRDPENKSKYIGSDENW------ILAENAIIEAAAEKGLPTVVETGEAAFY 469

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDA+GR WQ GTIQVD+NLP RF   Y  S ++K  PVMIHRA FGS+ERF+
Sbjct: 470 GPKLDFMVKDALGRKWQLGTIQVDYNLPERFELEYTGSDNQKHRPVMIHRAPFGSLERFV 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE+  GN PLWL+P Q IV  I+    EY +++ + L +  +    D R+E I  KI
Sbjct: 530 AVLIEHCAGNFPLWLTPEQFIVLPISEKFEEYGKKVLDSLNNSDIRGLIDLRDEKIGRKI 589

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R+  +KK+P ++I G+KE  +  + +R+ G      +++ +   +L  E
Sbjct: 590 RDAEVKKLPYMLIIGEKEMQDGMVSVRKHGEGDKGSMTIEEFKSLLLDE 638


>gi|150021207|ref|YP_001306561.1| threonyl-tRNA synthetase [Thermosipho melanesiensis BI429]
 gi|149793728|gb|ABR31176.1| threonyl-tRNA synthetase [Thermosipho melanesiensis BI429]
          Length = 636

 Score =  648 bits (1671), Expect = 0.0,   Method: Composition-based stats.
 Identities = 280/644 (43%), Positives = 408/644 (63%), Gaps = 21/644 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           +K+ FPDG++K F    T  ++A+SIS  L + AV   ++  + DL+ P+  + S++I+T
Sbjct: 1   MKIKFPDGNVKEFEKGITPGEIAKSISEGLYRNAVGAIVDNILWDLNRPINFDCSLKIVT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPE--VQVAIGPIIEDGFYYDFD-KEQPFSSDELA 120
            +D  +    RH+ AHI+A+AV  I+ E  V++ IGP IE+GFYYDF+        ++L 
Sbjct: 61  KKDKEAPEFFRHTMAHILAQAVMRIYGEENVRLGIGPTIENGFYYDFEILNGTIKEEDLE 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEK+M++II  D P  +  L  ++A ++   K + YKVE++  I   E V+ Y+QGE+ 
Sbjct: 121 NIEKEMKKIIKEDLPIERFELPKDEAIDMMNKKGQIYKVELINEIN-DEKVSFYKQGEFV 179

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+  TG +K F KL+  +GAYWRG    PML RIYGTA+ T++EL  YL  LEE
Sbjct: 180 DLCRGPHLPRTGMIKHF-KLLSASGAYWRGSEKNPMLQRIYGTAFATKEELENYLKMLEE 238

Query: 241 SEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           ++KRDHRKL  ++ LF I  D  +G+  +  KG  I   L+++ R    +  Y E+ TP 
Sbjct: 239 AKKRDHRKLGPKLGLFFINTDVAAGMPIFLPKGTIILNELMAFSRSLHEEYGYTEVMTPL 298

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V++  LW QSGHWD Y+ NM+       T K+   +A+KPMNCPGH+ ++ + + SYR+L
Sbjct: 299 VMNVKLWYQSGHWDHYKENMYF------TEKEEVEYAIKPMNCPGHILIYKNNVVSYRDL 352

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RL EFG V+R E SG LHGL+RVR FTQDDAH+FC ++Q+  E  K+  LI  +YK F
Sbjct: 353 PIRLFEFGKVHRYERSGVLHGLLRVRAFTQDDAHIFCRQDQIEEEVSKVVKLIDQLYKPF 412

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF      LST PE  +G +  W+ A N ++ VL+ IK      +   V  GEGAFYGPK
Sbjct: 413 GFSY-RATLSTMPEDHMGDEETWEKATNALRKVLEDIK------LEFEVAEGEGAFYGPK 465

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++ ++D++GR+WQC TIQ+DF +P RF   YV+    +  PVMIH A +GS+ERF GI+
Sbjct: 466 VDFHVRDSLGREWQCATIQLDFQMPERFELTYVDKDGIEKRPVMIHTAKYGSLERFFGIL 525

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+F G  PLWLSPIQ +V  ++   V YA++I ++L  + + +  D RNET+ YKIRE 
Sbjct: 526 IEHFAGAFPLWLSPIQVVVLPVSDKYVSYARKIYSILMENGVRVSVDDRNETLGYKIREA 585

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            I KIP +II G++E     I IR       + +++ + + +L+
Sbjct: 586 QINKIPYMIIVGEREEESGKISIRSRDGVEQKDIAVEEFLDLLS 629


>gi|313888403|ref|ZP_07822071.1| threonine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
 gi|312845600|gb|EFR32993.1| threonine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
          Length = 636

 Score =  648 bits (1671), Expect = 0.0,   Method: Composition-based stats.
 Identities = 269/640 (42%), Positives = 403/640 (62%), Gaps = 16/640 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           + +PDGS K +      S +   IS  L ++++   +NG++  L D V  +   +++  E
Sbjct: 3   IKYPDGSQKEYESGVKVSQITGDISEGLLRQSLGAVVNGEILGLDDKVYEDADFKVVKFE 62

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D     +  H+ +HIMA A+Q ++P+ + AIGP  E GFYYD D E  F  ++   IE K
Sbjct: 63  DKEGKQIFWHTASHIMAYAIQELYPDTKFAIGPSTETGFYYDLDLEHRFVEEDFKAIEDK 122

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+EI  +D P  +  +S E+A + F+ K + YKVE++  +PA E +T+Y+ G++ DLC+G
Sbjct: 123 MKEIAKKDLPVERIEISREEALKYFKEKGQDYKVELINDLPADEKITMYKIGDFLDLCKG 182

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PH+ ST ++K   KL+ +AGAYWRGDSN  ML R+YG A+  Q +L +Y+   EE+EKRD
Sbjct: 183 PHLLSTKKIK-AIKLLSIAGAYWRGDSNNKMLQRLYGIAFEKQSQLEEYITRREEAEKRD 241

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHL 304
           HRKL +E+DLF + E+G G  F+H  G  +   L+++ R  + +  Y EI TP +L++ L
Sbjct: 242 HRKLGKELDLFSMHEEGPGFPFFHPNGMILRNNLLNWWRGVLDENGYGEILTPIILNEAL 301

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W +SGHWD Y+ NM+  K  D        +A+KPMNCPG + V+N    SYR+LP+RLAE
Sbjct: 302 WHRSGHWDHYKDNMYFTKIDDG------DYAVKPMNCPGSILVYNSNKHSYRDLPIRLAE 355

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           +G V+R+E SG+LHGL RVR FTQDDAHV+C   Q+ +E  K+ +L   +Y  FGF+  +
Sbjct: 356 YGIVHRHELSGALHGLFRVRTFTQDDAHVYCLFSQVKDEVFKMIDLADYLYSTFGFKYSI 415

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
            +LSTRP+  +G    W+ AE  +K  L+      +  +   +  G+GAFYGPK ++ L+
Sbjct: 416 -ELSTRPDDYMGELEAWNLAEKSLKEALE------EKNLPYTINEGDGAFYGPKIDFHLE 468

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           DAIGR WQCGTIQ+DF LP  F+  YV+ + E+  PVM+HRA+ GS+ERF+GI+IE+F G
Sbjct: 469 DAIGRTWQCGTIQLDFQLPENFDLTYVDENGERQRPVMLHRALLGSVERFMGILIEHFAG 528

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             PLWLSP+Q  V  ++    ++A+ IA+ L +  L +  D R E + YKIRE  +KKI 
Sbjct: 529 KFPLWLSPVQVEVIPVSDKFKDFAESIADKLHAAGLRVHLDGRAEKVGYKIREAQVKKIN 588

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            +++ G+KE +   + +R+      Q V + + I  L +E
Sbjct: 589 YMLVIGEKEETSGKLSVRKRNGEEVQDVDVDEFIASLKEE 628


>gi|120434969|ref|YP_860655.1| threonyl-tRNA synthetase [Gramella forsetii KT0803]
 gi|117577119|emb|CAL65588.1| threonyl-tRNA synthetase [Gramella forsetii KT0803]
          Length = 667

 Score =  647 bits (1670), Expect = 0.0,   Method: Composition-based stats.
 Identities = 262/652 (40%), Positives = 388/652 (59%), Gaps = 19/652 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           M   IK+T PDGSIK F    T  DVA+SIS  LA+  ++   N +  ++S P+  +G +
Sbjct: 15  MNKMIKITLPDGSIKEFEKGTTPMDVAKSISEGLARNVISAKFNNETVEVSTPLNTDGDL 74

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDE 118
            + T  +        HS +H+MA+A+Q ++P  ++ IGP IE GFYYD D  EQ  S ++
Sbjct: 75  VLFTWSNDEGKKAFWHSTSHVMAQAIQDLFPGAKLTIGPAIERGFYYDVDFGEQKISDND 134

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
             +IE +M EI      F  +  S + A   ++ +   +KVE++E++   E +T      
Sbjct: 135 FKRIEDRMLEIARGKHDFQLREASKDDALNFYKKENNQFKVELIENLQDGE-ITFCDHDT 193

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + DLCRG H+ +TG +K   KLM VAGAYWRGD   P L+R+YG ++  Q+EL +YL  L
Sbjct: 194 FTDLCRGGHIPNTGIIK-AVKLMSVAGAYWRGDEKNPQLTRVYGISFPKQKELKEYLELL 252

Query: 239 EESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINT 296
           EE++KRDHRKL +E++LF  ++    G+  W  KG  + + L +++++ + K  YE + +
Sbjct: 253 EEAKKRDHRKLGKELELFTFSQKVGQGLPLWLPKGAALRERLENFLKKAQKKAGYEMVVS 312

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +  + L+  SGH+  Y  + F       T  +   F LKPMNCP H  ++N    SYR
Sbjct: 313 PHIGSKELYVTSGHYAKYGEDSFQ---PISTPNEGEEFMLKPMNCPHHCEMYNASSWSYR 369

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +LP R AEFG+VYR E SG LHGL RVRGFTQDDAH+FC  EQ+  E  K+ +L + ++ 
Sbjct: 370 DLPKRFAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCMPEQLDEEFKKVIDLTLYVFS 429

Query: 417 DFGFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
             GFE    ++S R        +GSD  W+ AE+ +    D      +  +N  V  GE 
Sbjct: 430 SLGFEDFTAQVSLRDPDNKEKYIGSDDAWEKAESAIINAAD------EKGLNYVVETGEA 483

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           AFYGPK ++++KDA+GR WQ GTIQVD+NLP RF+  Y  S +E   PVMIHRA FGS+E
Sbjct: 484 AFYGPKLDFMVKDALGRSWQLGTIQVDYNLPERFDLTYKGSDNESHRPVMIHRAPFGSME 543

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
           RFI I++E+  GN PLWL P QAI+ +++    +Y+Q++  LL+++ +    D RNETI 
Sbjct: 544 RFIAILLEHTGGNFPLWLMPEQAIILSLSEKYEKYSQKVLTLLENNEIRALADNRNETIG 603

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            KIRE  + K P ++I G++EA + +I +R+        + + D   ++  E
Sbjct: 604 KKIREAEVNKYPYMLIVGEQEAKDGTISVRKHSEGDLGTMKIEDFANLINTE 655


>gi|313680219|ref|YP_004057958.1| ser-tRNA(thr) hydrolase; threonyl-tRNA synthetase [Oceanithermus
           profundus DSM 14977]
 gi|313152934|gb|ADR36785.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Oceanithermus
           profundus DSM 14977]
          Length = 649

 Score =  647 bits (1670), Expect = 0.0,   Method: Composition-based stats.
 Identities = 278/652 (42%), Positives = 406/652 (62%), Gaps = 24/652 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           +K+  PDG     P  +T  DVA  ISRSLAK+AV   ++G++ DL  P+ EG +++I+T
Sbjct: 1   MKIRLPDGKELELPEGSTARDVAAKISRSLAKEAVGAIVDGELYDLFKPLPEGATVQILT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIW-------PEVQVAIGPIIEDGFYYDFDKEQPFSS 116
            +DP    + RH+ AH+MA+AV+  +        EV++ IGP+IE+GFYYD D  +P S 
Sbjct: 61  RKDPEYQQLFRHTLAHVMAQAVKEFFAKKGYDPEEVKLGIGPVIENGFYYDIDAPEPISD 120

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
            +L +IEK M  II R+ P  +  L  E+A   +   K+ YK E++E +P  E ++ Y Q
Sbjct: 121 ADLPEIEKLMHRIIKRNLPLRRYVLEREEALARYRG-KDPYKTELIEDLPEGEEISFYEQ 179

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
             + DLCRGPHV STG++   FKL  VAGAYWRGD +RPML RIYG A+ T++EL  YL+
Sbjct: 180 EGFTDLCRGPHVPSTGKIPPHFKLTHVAGAYWRGDESRPMLQRIYGVAFRTKEELEHYLW 239

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMR-RKIKDDYEEI 294
            LEE++KRDHR+L R+++LFHI      G++ W  KG  + + L+++MR  +IK  Y+ +
Sbjct: 240 QLEEAKKRDHRRLGRQLELFHIDPMVGKGLVLWLPKGNVLREELVAFMRDEQIKRGYQLV 299

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
            TP +    L++ SGH+  Y  + F        ++D   + LKPMNCP HV ++    +S
Sbjct: 300 TTPHIGSLELYKTSGHYPYYAESQFPPM----ELEDGEAYLLKPMNCPHHVRIYAMRPRS 355

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YRELP+RLAEFG+VYR E SG LHGL RVRGFTQDDAH+FCT EQ+  E L + +L + +
Sbjct: 356 YRELPLRLAEFGTVYRFEQSGELHGLTRVRGFTQDDAHIFCTPEQVKEEFLGVLDLTLKV 415

Query: 415 YKDFGFEKIMVKLSTRPE---KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
           ++  G      ++  R     K VG    W  AE  ++   D         ++  +  G+
Sbjct: 416 FRTLGLSDFRARIGVRDPGSDKYVGDAEHWAVAERQIQEACDEAG------LDYTIEEGD 469

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
            AFYGPK ++++KD + R+WQ GTIQVD+NLP RF+  Y  +  E+  PVMIHRA FGS+
Sbjct: 470 AAFYGPKLDFVVKDVLSREWQLGTIQVDYNLPERFDIGYKGADGEEHRPVMIHRAPFGSL 529

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           ERFIGI+IE+F G  PLWL+P+Q +V  IT    +YA+++   L++  L +E D R E +
Sbjct: 530 ERFIGILIEHFAGEFPLWLAPVQVVVVPITDRHHDYARKVRAELEAAGLRVEVDDRPERM 589

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           N KIR+   +K+P+I++ GDKE  E ++ +R   +      +L + +  L +
Sbjct: 590 NAKIRDAETQKVPVILVVGDKETEEGTVAVRDRRTGERTTRALSEVVRDLAE 641


>gi|188586439|ref|YP_001917984.1| Ser-tRNA(Thr) hydrolase, threonyl-tRNA synthetase [Natranaerobius
           thermophilus JW/NM-WN-LF]
 gi|229558041|sp|B2A5P2|SYT_NATTJ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|179351126|gb|ACB85396.1| Ser-tRNA(Thr) hydrolase, threonyl-tRNA synthetase [Natranaerobius
           thermophilus JW/NM-WN-LF]
          Length = 636

 Score =  647 bits (1670), Expect = 0.0,   Method: Composition-based stats.
 Identities = 274/644 (42%), Positives = 411/644 (63%), Gaps = 16/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEII 62
            +K+T  DGS+K     +   D+A+SIS  LAK+AV   ++GK   L+  + E   +EI+
Sbjct: 1   MLKITLKDGSVKEIEKGSNVLDLAKSISNRLAKEAVGAKVDGKTVGLNKELNENCEVEIL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           + ED     + RH+ +HI+A AV+ ++  V++ IGP I+DGFYYDFD E   S  +L  I
Sbjct: 61  SFEDDEGCDIYRHTSSHILAHAVKRLYDNVKLGIGPPIKDGFYYDFDLEHSLSDKDLEDI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           +K+M++II  D P  ++    ++A E+F+   E YK+E+++ +   E +  Y+QG++ DL
Sbjct: 121 KKEMKKIIKEDLPIERKVYKRDEAIEMFKEMGEDYKIELIQDLGEDEEICCYQQGDFIDL 180

Query: 183 CRGPHVRSTGQVKKFFKLM-KVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           C+GPH+ STG++K     + KVAGAYWRGD NR ML RIYGT++  + +L +Y+  LEE+
Sbjct: 181 CQGPHLPSTGKIKDTALDLLKVAGAYWRGDENRAMLQRIYGTSFIKKSQLEEYIQRLEEA 240

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVL 300
           +KR+HRKL +E+DLF   E+  G  F+H  G  +   LI + RR+ +   Y+EI+TP +L
Sbjct: 241 KKREHRKLGKELDLFSFHEEAPGSPFFHNNGMIVINELIDFWRREHRKAGYQEISTPIIL 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ LW++SGHWD ++ NM+       T  D   FA+KPMNCPG + V+N+ + SYR+ P+
Sbjct: 301 NRGLWERSGHWDHFQENMYF------TEIDDEDFAVKPMNCPGAMLVYNNNMYSYRDFPL 354

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G V+R+E SG+LHGL+R R FTQDDAH+F    Q+  E   + NL+   Y  FGF
Sbjct: 355 RVAELGKVHRHELSGALHGLLRARSFTQDDAHIFMLPSQVEEELENVINLVDRFYSVFGF 414

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
               V+LST+PEK +GSD +WD A N +K VL+      +  I   V  G+GAFYGPK +
Sbjct: 415 NY-YVELSTKPEKAMGSDEIWDRAINALKSVLE------KRGIKYIVNEGDGAFYGPKID 467

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           + L+DAIGR WQC TIQ+DF LP RF+  Y+    +K  PVMIHR ++G+IERF  ++IE
Sbjct: 468 FQLEDAIGRSWQCSTIQLDFLLPERFDLTYIGEDGQKHRPVMIHRVIYGAIERFFALLIE 527

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +++G  PLWL+P QA++  I    +EY ++I   L+S  +  + D RNE I YKIR+  +
Sbjct: 528 HYEGKFPLWLAPRQAVIIPIADRHMEYGKDITKQLESEGIRADLDQRNEKIGYKIRDAQL 587

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KK+P ++I GD E   +++ +R          S+ + +  +  E
Sbjct: 588 KKVPYMLIVGDDEVENKTVSVRTREDGDIGSKSVAELVDEIKVE 631


>gi|229823243|ref|ZP_04449312.1| hypothetical protein GCWU000282_00541 [Catonella morbi ATCC 51271]
 gi|229787409|gb|EEP23523.1| hypothetical protein GCWU000282_00541 [Catonella morbi ATCC 51271]
          Length = 647

 Score =  647 bits (1670), Expect = 0.0,   Method: Composition-based stats.
 Identities = 257/651 (39%), Positives = 402/651 (61%), Gaps = 22/651 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           S I LTFPDGS++++    T   VA SI  SLAK  +A    G++ D   P+  +G+IEI
Sbjct: 2   SQIALTFPDGSVRHYDKGVTVDQVAASIGSSLAKATLAGKFQGQLVDHDRPLEADGAIEI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           IT + P +L ++RHS AH+MA A+  ++P +   +GP IE GFYYD DKE   + D+L  
Sbjct: 62  ITDKSPEALEIMRHSTAHLMAHALTRLYPGIHFGVGPAIESGFYYDTDKEVQLTEDDLPA 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +EK+M++II+++ P +++ +S  +A ELF+   + YKVE++  +PA E +T+Y+Q ++ D
Sbjct: 122 VEKEMKKIISQNYPIVRREVSRAEALELFK--HDPYKVELITDLPADEVITVYQQEDFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG HV STG++K F KL+ +AGAYWRG+S+  M+ R+YGTA+  Q +L ++L   +E+
Sbjct: 180 LCRGIHVPSTGKIKVF-KLLSLAGAYWRGNSDNKMMQRVYGTAFFKQADLDEFLRLRQEA 238

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQV 299
           ++RDHRKL +E+ +F ++++ GSG+ FW  KG  I + +  Y M ++I   Y+ + TP +
Sbjct: 239 KERDHRKLGKELGIFMVSKEVGSGLPFWLPKGATIRRVIERYIMDKEISLGYDHVYTPIM 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L+Q SGHW  Y+ +MF          D     L+PMNCP H+ ++ + + SYRELP
Sbjct: 299 AKVDLYQTSGHWAHYKDDMFPPMDMG----DGEMLVLRPMNCPHHMMIYKNDIHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  T +DAH+F   +Q+  E +++ +LI ++Y DFG
Sbjct: 355 IRIAELGMMHRYEKSGALSGLQRVREMTLNDAHIFVRPDQIKEEFIRVLDLIKAVYHDFG 414

Query: 420 FEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R      K    DA+W+ A+ ++K  +D +       ++    +GE AFY
Sbjct: 415 ITDYRFRLSYRDPENKEKYFDDDAMWEKAQAMLKEAMDELG------LDYFEAIGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK-CHPVMIHRAVFGSIERF 534
           GPK +   K AIG +    TIQ+DF LP RF+  YV    +    PV+IHR V  ++ERF
Sbjct: 469 GPKLDIQFKTAIGLEETMSTIQLDFLLPERFDLTYVGEDGQDNHRPVVIHRGVVSTMERF 528

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           +  +IE +KG  P WL+P+Q  +  ++  +  +  QEI   LK+    ++ D RNE + Y
Sbjct: 529 VAYLIEEYKGAFPTWLAPVQVALLPVSLEAHSDRVQEIYEDLKAKGFRVDMDLRNEKLGY 588

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR     KIP  I+ GD+E SE ++ +R +GS  ++  S  D + +L+++
Sbjct: 589 KIRSAQTAKIPYQIVIGDQEVSEGTVNVRHYGSAKSESYSYDDFVRLLSED 639


>gi|225873756|ref|YP_002755215.1| threonine--tRNA ligase [Acidobacterium capsulatum ATCC 51196]
 gi|259516262|sp|C1F9K5|SYT_ACIC5 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|225794268|gb|ACO34358.1| threonine--tRNA ligase [Acidobacterium capsulatum ATCC 51196]
          Length = 681

 Score =  647 bits (1670), Expect = 0.0,   Method: Composition-based stats.
 Identities = 268/679 (39%), Positives = 393/679 (57%), Gaps = 53/679 (7%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAI----------------N 44
           M   I++T PDG++K FP   T   VAESIS  LA+ AV   I                +
Sbjct: 1   MEKQIQVTLPDGTVKTFPAGTTPFQVAESISPRLAQAAVVARIQTTQPAAATVTAGSEAD 60

Query: 45  GK-----------------VCDLSDPVREG-SIEIITPEDPRSLAVIRHSCAHIMAEAVQ 86
            K                 + DLS P+ E   + ++T +DP +L V+RHS AH+MA AV 
Sbjct: 61  SKTASEAAMYSAADPGAPRLVDLSTPLEEDVQLALLTEKDPEALKVLRHSAAHLMATAVL 120

Query: 87  SIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKA 146
            ++PE ++  GP  + GF+YDF +  PF+ ++L  IE +M EI  R+  F+++++  E+ 
Sbjct: 121 ELFPETKLGHGPATDAGFFYDFYRPTPFTPEDLKLIEGRMAEIAQRNDKFVREFIPREEG 180

Query: 147 RELFESKKEAYKVEILESIPA-KENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAG 205
              F++  +  KV  +E      E ++LYR G + D CRGPHV ST ++K F K+  +AG
Sbjct: 181 LAEFKAGDDFMKVHFIERFTQPGEAISLYRNGNFVDFCRGPHVPSTNRIKAF-KVTNLAG 239

Query: 206 AYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGS-G 264
           AYW GD   P L R+YGTA+ ++++L ++   LEE  KRDHR L +++DLF I E    G
Sbjct: 240 AYWLGDEKNPQLQRLYGTAFFSKKDLDEHFARLEEIAKRDHRVLGKQLDLFSIQEIAGAG 299

Query: 265 VIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKC 323
           +IFWH KG  I + +  +MR +  +  Y+ + TP V+   LW+ SGH   Y  NMF    
Sbjct: 300 LIFWHPKGAMIRKIMEDWMREECIRRGYDLVYTPHVMRVQLWKTSGHEGFYSQNMFTPME 359

Query: 324 ADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRV 383
            DD       + LKPMNCPGH+ ++    +SYR+LPVR AE G+VYR E SG++HGL+RV
Sbjct: 360 LDDA-----EYRLKPMNCPGHILIYKSQPRSYRDLPVRYAELGNVYRYERSGTMHGLLRV 414

Query: 384 RGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK----RVGSDA 439
           RGFTQDDAH+FCT EQ+ +E +   +   S+   FGF    V+LST          GSD 
Sbjct: 415 RGFTQDDAHIFCTPEQIEDEVVACIDFAQSVLTTFGFMDFQVELSTWDPNDRKNYAGSDD 474

Query: 440 LWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVD 499
            W+ A + ++  L      ++  I    + GE AFYGPK +  L D +GR WQ  T+Q D
Sbjct: 475 KWNLAISSLESAL------TRKGIAYKTIAGEAAFYGPKIDIKLVDVLGRLWQLSTVQFD 528

Query: 500 FNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTT 559
           FNLP+RF   YV    E+  PVM+HRA++GS+ERF G++IE++ G  PLWL+P+Q  +  
Sbjct: 529 FNLPARFELEYVGEDGERHQPVMVHRALYGSVERFFGVLIEHYAGAFPLWLAPVQIGLVP 588

Query: 560 ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSI 619
           I+   + YA+++   L++    +E D RNE +N KIR+ +++K P ++I GDKEA   ++
Sbjct: 589 ISERHLAYAEKVQQQLEAAGFRVELDRRNEKMNAKIRDFTLQKFPYVLIMGDKEAEAGAV 648

Query: 620 GIRRFGSTTTQKVSLLDAI 638
            +R  G      + L + I
Sbjct: 649 SVRTRGKGDQGSLPLDEFI 667


>gi|228472826|ref|ZP_04057584.1| threonine--tRNA ligase [Capnocytophaga gingivalis ATCC 33624]
 gi|228275877|gb|EEK14643.1| threonine--tRNA ligase [Capnocytophaga gingivalis ATCC 33624]
          Length = 649

 Score =  647 bits (1669), Expect = 0.0,   Method: Composition-based stats.
 Identities = 256/649 (39%), Positives = 390/649 (60%), Gaps = 20/649 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            IK+T PDGS+K +    T ++VA+SIS  LA+  ++ + NGK  +   P+  +GS+ + 
Sbjct: 1   MIKITLPDGSVKEYKKGITPAEVAQSISEGLARNVISASYNGKTIETVTPLETDGSLVLY 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQ 121
           T + P       HS AHI+A+A++ ++P +++ IGP I +GFYYD D      +  +   
Sbjct: 61  TWDSPEGKKAFWHSSAHILAQALEELYPNIKLTIGPAIANGFYYDVDFNGNTITDKDFPA 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE KM EI      F  + +S  +A   ++ K E YK E++E++    ++T      + D
Sbjct: 121 IEAKMLEIARGKYEFKMRPVSKAEALSYYKGKNE-YKTELIEAL-EDGSITFCDHSTFTD 178

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG H+ +TG VK   K++ VAGAYWRG+ N P L+R+YG ++  Q++LT+YL  LEE+
Sbjct: 179 LCRGGHLPNTGFVK-AVKILSVAGAYWRGNENNPQLTRVYGISFPKQKDLTEYLTLLEEA 237

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           +KRDHRKL +E++LF  +     G+  W  KG  + + L +++R+ + +  YE++ TP +
Sbjct: 238 KKRDHRKLGKELELFTFSNKVGQGLPLWLPKGAALRERLEAFLRKAQKQAGYEQVVTPHI 297

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             ++L+  SGHW+ Y  + F       T  +   + LKPMNCP H  ++N    SY++LP
Sbjct: 298 GHKNLYVTSGHWEKYGKDSFQ---PIATPNEGEEYLLKPMNCPHHCEIYNSHPWSYKDLP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
            R AEFG+VYR E SG LHGL RVR FTQDDAH+FCT EQ+  E   + +L++ ++   G
Sbjct: 355 KRFAEFGTVYRYEQSGELHGLTRVRCFTQDDAHIFCTPEQLDAEFKHVIDLVLYVFGSLG 414

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           F+    ++S R  +     +G+D  W  AEN +      I  + +  +   +  GE AFY
Sbjct: 415 FDNFTAQVSLRDPENLSKYIGTDENWAKAENAI------INAAKEKNLTYVIETGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDA+GR WQ GTIQVD+NLP RF+ +Y  + +E   PVMIHRA FGS+ERF+
Sbjct: 469 GPKLDFMVKDALGRSWQLGTIQVDYNLPERFDLWYKGADNELHRPVMIHRAPFGSMERFV 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            I++E+  GNLPLWL P Q  +  I+     YA ++ANLL+   L    D RNETI  KI
Sbjct: 529 AILLEHTAGNLPLWLVPEQVNILCISEKYEGYAHKVANLLQEADLRPHVDNRNETIGKKI 588

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           RE   +K P ++I G++E    ++ +RR G      + + D I ++ +E
Sbjct: 589 REAETQKFPYMVIVGEEEEKNATLSVRRHGGEDLGSMKIADFITLIQEE 637


>gi|295135444|ref|YP_003586120.1| threonyl-tRNA synthetase [Zunongwangia profunda SM-A87]
 gi|294983459|gb|ADF53924.1| threonyl-tRNA synthetase [Zunongwangia profunda SM-A87]
          Length = 648

 Score =  647 bits (1669), Expect = 0.0,   Method: Composition-based stats.
 Identities = 262/649 (40%), Positives = 397/649 (61%), Gaps = 19/649 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            IK+T PDGSIK     +T  DVA+SIS  LA+  ++   N  + + S P+  +G++ + 
Sbjct: 1   MIKVTLPDGSIKELEQGSTPMDVAQSISAGLARNVISAKYNDTIVETSTPLTTDGNLTLY 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
           T  D        HS +H+MA+A+Q ++P  ++ IGP IE+GFYYD D  EQ  S  + ++
Sbjct: 61  TWNDDEGKKAFWHSTSHVMAQAIQDLYPGAKLTIGPAIENGFYYDVDFGEQKISESDFSK 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE +M EI      F  + ++ ++A + ++     +KVE++E++     +T      + D
Sbjct: 121 IENRMLEIARGKHDFKMREVTKKEALDYYKKINNPFKVELIENL-EDGTITFCDHDTFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG H+ +TG +K   KLM VAGAYWRGD   P L+R+YGT++  Q+EL +YL  LEE+
Sbjct: 180 LCRGGHIPNTGIIK-AVKLMNVAGAYWRGDEKNPQLTRVYGTSFPKQKELKEYLELLEEA 238

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           +KRDHRKL +E++LF  ++    G+  W  KG  + + L +++++ + K  YE + +P +
Sbjct: 239 KKRDHRKLGKELELFTFSQKVGQGLPLWLPKGAALRERLENFLKKAQKKAGYEMVVSPHI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             + L+  SGH+  Y  + F       T  +   F LKPMNCP H  ++N    SYR+LP
Sbjct: 299 GHKELYVTSGHYAKYGEDSFQ---PIKTPHEGEEFLLKPMNCPHHCEMYNSQSWSYRDLP 355

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
            R AEFG+VYR E SG LHGL RVRGFTQDDAH+FCT EQ+  E  K+ +L + ++   G
Sbjct: 356 KRFAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCTPEQLDEEFKKVIDLTLYVFDSLG 415

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           FE    ++S R  +     +GSD +W+ AEN +      I  + +  +N  +  GE AFY
Sbjct: 416 FENFTAQVSLRDPENKEKYIGSDDVWEKAENAI------INAAKEKGLNYVIETGEAAFY 469

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDA+GR WQ GTIQVD+NLP RF+  Y  S +E   PVMIHRA FGS+ERFI
Sbjct: 470 GPKLDFMVKDALGRSWQLGTIQVDYNLPERFDLTYKGSDNESHRPVMIHRAPFGSMERFI 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            I++E+  GN PLWL P QAI+ +++    +Y+Q++ +LL++H +    D RNETI  KI
Sbjct: 530 AILLEHTAGNFPLWLMPEQAIILSLSEKYEKYSQKVLSLLENHEIRAVLDNRNETIGKKI 589

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           RE  ++K P ++I G++EA + ++ +R+ G      + + +   I+  E
Sbjct: 590 REAEVQKFPYMLIVGEQEAKDGTVSVRKHGEGDIGTMPVEEFAQIIKNE 638


>gi|332878705|ref|ZP_08446422.1| threonine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
 gi|332683342|gb|EGJ56222.1| threonine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
          Length = 647

 Score =  647 bits (1669), Expect = 0.0,   Method: Composition-based stats.
 Identities = 257/649 (39%), Positives = 389/649 (59%), Gaps = 20/649 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            IK+T PDGS+K F    T ++VA SIS  LA+  ++ A NGK  +   P+  +GS+ + 
Sbjct: 1   MIKITLPDGSVKEFNSGITPAEVALSISEGLARNVLSAAFNGKTIETVTPLTTDGSLVLY 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQ 121
           T E+P       HS AHI+A+A++ ++P +++ IGP I +GFYYD D   +P S  +   
Sbjct: 61  TWENPEGKKAFWHSSAHILAQALEELYPGIKLTIGPAIANGFYYDVDFNGKPISEKDFPA 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE K  EI      F  + +S  +A   +  K E YK E++E++     +T      + D
Sbjct: 121 IEAKFLEIARGKHEFKMRPVSKAEALSYYADKNE-YKTELIEAL-EDGTITFCDHSTFTD 178

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG H+ +TG VK   K++  AGAYWRGD + P L+R+YG ++  Q++LT+YL  LEE+
Sbjct: 179 LCRGGHIPNTGFVK-AVKVLSAAGAYWRGDEHNPQLTRVYGISFPKQKDLTEYLTLLEEA 237

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           +KRDHRKL +E++LF  +     G+  W  KG  + + L +++R+ + +  YE++ TP +
Sbjct: 238 KKRDHRKLGKELELFTFSNKVGQGLPLWLPKGAALRERLEAFLRKAQKEAGYEQVVTPHI 297

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             ++L+  SGHWD Y  + F       T  +   + LKPMNCP H  ++N    SY++LP
Sbjct: 298 GHKNLYVTSGHWDKYGKDSFQ---PIATPNEGEEYLLKPMNCPHHCEIYNSHPWSYKDLP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
            R AEFG+VYR E SG LHGL RVR FTQDDAH+FCT EQ+  E   + +L++ ++   G
Sbjct: 355 KRFAEFGTVYRYEQSGELHGLTRVRCFTQDDAHIFCTPEQLDAEFKHVIDLVLYVFGSLG 414

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           F+    ++S R        +G+D  W  AEN +      I  + +  +N  +  GE AFY
Sbjct: 415 FDNFTAQVSLRDPDNPTKYIGTDENWAKAENAI------INAAKEKGLNYVIETGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDA+GR WQ GTIQVD+NLP RF+ +Y  + +E   PVMIHRA FGS+ERF+
Sbjct: 469 GPKLDFMVKDALGRSWQLGTIQVDYNLPERFDLWYKGADNEMHRPVMIHRAPFGSMERFV 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            I++E+  GN PLWL+P QAIV +++     YAQ++  LL++  +    D R ET+  KI
Sbjct: 529 AILLEHTAGNFPLWLNPNQAIVLSLSEKYENYAQKVLRLLENSDIRTLIDNRAETMGKKI 588

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           RE   +K+P ++I G+ E  E ++ +R+ G      +S+     ++  E
Sbjct: 589 REAETQKVPYMLIVGENEEKEGTVSVRKRGGEDLGSMSVEAFAKLINDE 637


>gi|289550561|ref|YP_003471465.1| Threonyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01]
 gi|315658055|ref|ZP_07910928.1| threonine--tRNA ligase [Staphylococcus lugdunensis M23590]
 gi|289180093|gb|ADC87338.1| Threonyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01]
 gi|315496945|gb|EFU85267.1| threonine--tRNA ligase [Staphylococcus lugdunensis M23590]
          Length = 645

 Score =  647 bits (1668), Expect = 0.0,   Method: Composition-based stats.
 Identities = 260/650 (40%), Positives = 397/650 (61%), Gaps = 21/650 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           + I + FPDG+ K F    T  ++A+SIS  L KKAVA   N ++ DL+ P+  +G IEI
Sbjct: 2   TKINIQFPDGNKKAFDKGITTEEIAQSISPGLRKKAVAGKFNQQLIDLARPLEEDGEIEI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +TP    +L V+RHS AH+MA A++ ++  VQ  +GP+IE GFYYDFD E   SSD+  +
Sbjct: 62  VTPGSEEALEVLRHSTAHLMANALKRLYGNVQFGVGPVIEGGFYYDFDMENKISSDDFEK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK M++I+  +    ++ +S E+A+E F+   + YK+E++++IP  E VTLY QG++ D
Sbjct: 122 IEKMMKQIVNENHKIERKVVSREEAKEFFK--DDPYKLELIDAIPQDEMVTLYSQGDFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG HV ST ++K+F KL+  AGAYWRGDSN  ML RIYGTA+  +++L  +L  LEE 
Sbjct: 180 LCRGVHVPSTAKIKEF-KLLSTAGAYWRGDSNNKMLQRIYGTAFFDKKDLKAHLQLLEER 238

Query: 242 EKRDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
            +RDHRK+ ++++LF +    G+G+  W   G  I + +  Y+  +++   Y+ + TP +
Sbjct: 239 RERDHRKIGKDLELFTNNQLVGAGLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVL 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +  L++ SGHW  YR +MF     D    +     L+PMNCP H+ ++ +   SYRELP
Sbjct: 299 ANVDLYRTSGHWAHYRDDMFPPMKLD----ENEEMVLRPMNCPHHMMIYKNKPHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +RLAE G+++R E SG++ GL RVRG T +D+H+F   +Q+ +E  ++ ++I  +YKDFG
Sbjct: 355 IRLAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKDEFKRVVHMIQDVYKDFG 414

Query: 420 FEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           FE    +LS R      K +  D +W+ AE+++K  +D +       +     +GE AFY
Sbjct: 415 FEDYTFRLSYRDPEDKEKYMDDDDMWNKAESMLKEAVDELG------LPYVEAIGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G++    T Q+DF LP RF   Y+ S  E   PV+IHR V  ++ERF+
Sbjct: 469 GPKLDVQVKTAMGKEETLSTAQLDFLLPERFELTYIGSDGEYHRPVVIHRGVVSTMERFV 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             + E  KG  P WL+P Q  +  +      +YA+ + + LKS  + +E D RNE + YK
Sbjct: 529 AFLTEETKGAFPTWLAPKQVEIIPVNVDLHYDYARNLQDELKSQGVRVEIDDRNEKMGYK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IRE  ++KIP  I+ GDKE     + +R++GS   Q +   + I  L  E
Sbjct: 589 IREAQMQKIPYQIVVGDKEVENNQVNVRQYGSQDQQTLERDEFIWNLVDE 638


>gi|256819829|ref|YP_003141108.1| threonyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271]
 gi|256581412|gb|ACU92547.1| threonyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271]
          Length = 647

 Score =  646 bits (1667), Expect = 0.0,   Method: Composition-based stats.
 Identities = 255/649 (39%), Positives = 390/649 (60%), Gaps = 20/649 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            IK+T PDGS+K +    T +++A SIS  LA+  ++ + NGK  +   P+  +GS+ + 
Sbjct: 1   MIKITLPDGSVKEYQSGITPAEIAASISEGLARNVLSASFNGKTIETVTPLTTDGSLTLY 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQ 121
           T + P       HS AHI+A+A++ ++P +++ IGP I +GFYYD D   +P S  +   
Sbjct: 61  TWDSPEGKKAFWHSSAHILAQALEELYPGIKLTIGPAIANGFYYDVDFNGKPISEKDFPA 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE K  EI     PF  + +S  +A   +  K E YK E++E++     +T      + D
Sbjct: 121 IEAKFLEIARGKHPFKMRPVSKAEALSYYAGKNE-YKTELIEAL-EDGTITFCDHSTFTD 178

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG H+ +TG VK   K++  AGAYWRGD + P L+R+Y  ++  Q+ELT+YL  LEE+
Sbjct: 179 LCRGGHIPNTGFVK-AVKVLSAAGAYWRGDEHNPQLTRVYAISFPKQKELTEYLELLEEA 237

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           +KRDHRKL +E++LF  +     G+  W  KG  + + L +++R+ + +  YE++ TP +
Sbjct: 238 KKRDHRKLGKELELFTFSNKVGQGLPLWLPKGAALRERLEAFLRKAQKQAGYEQVVTPHI 297

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             ++L+  SGHWD Y  + F       T  +   + LKPMNCP H  ++N    SY++LP
Sbjct: 298 GHKNLYVTSGHWDKYGKDSFQ---PIATPNEGEEYLLKPMNCPHHCEIYNSHPWSYKDLP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
            R AEFG+VYR E SG LHGL RVR FTQDDAH+FCT EQ+ +E   + +L++ ++   G
Sbjct: 355 KRFAEFGTVYRYEQSGELHGLTRVRCFTQDDAHIFCTPEQLDDEFKHVIDLVLYVFGSLG 414

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           F+    ++S R  +     +GSD  W  AEN +      I  + +  ++  +  GE AFY
Sbjct: 415 FDNFTAQVSLRDPENPTKYIGSDENWAKAENAI------INAAKEKGLSYVIETGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDA+GR WQ GTIQVD+NLP RF+ +Y  + +E   PVMIHRA FGS+ERF+
Sbjct: 469 GPKLDFMVKDALGRSWQLGTIQVDYNLPERFDLWYKGADNEMHRPVMIHRAPFGSMERFV 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            I++E+  GN PLWL+P QAIV +++     YAQ++  LL++  +    D R ET+  KI
Sbjct: 529 AILLEHTAGNFPLWLNPSQAIVLSLSEKYENYAQKVLRLLENSDIRTLIDNRAETMGKKI 588

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           RE   +KIP ++I G+ E  E ++ +R+ G      +S+     ++  E
Sbjct: 589 REAETQKIPYMLIVGENEEKEGTVSVRKRGGEDLGSMSVEAFAKLINDE 637


>gi|315222497|ref|ZP_07864386.1| threonyl-tRNA synthetase [Streptococcus anginosus F0211]
 gi|315188183|gb|EFU21909.1| threonyl-tRNA synthetase [Streptococcus anginosus F0211]
          Length = 650

 Score =  646 bits (1667), Expect = 0.0,   Method: Composition-based stats.
 Identities = 258/651 (39%), Positives = 413/651 (63%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+TFPDG+++ +   +T  D+A+SIS SLAKKA+A   NGK+ D + P+  +GSIEI+
Sbjct: 1   MIKITFPDGAVREYESGSTTFDIAQSISNSLAKKALAGKFNGKLIDTTRPITEDGSIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQ 121
           TP+   +L ++RHS AH+ A+A + ++P++ + +GP I+DGFYYD D      S+++L +
Sbjct: 61  TPDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIQDGFYYDTDNAAGQISNEDLPR 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWF 180
           IE++M++I+  + P +++ ++ ++ARE+F+   + YK+E++E     E  +T+YRQGE+ 
Sbjct: 121 IEEEMKKIVKENFPSIREEVTKDQAREIFK--NDPYKLELIEEHSEDEGGLTIYRQGEYV 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ RIYGTAW  +++L  YL   EE
Sbjct: 179 DLCRGPHVPSTGRIQIFHLL-NVAGAYWRGNSDNAMMQRIYGTAWFDKKDLKNYLQMREE 237

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           +++RDHRKL +E+DLF I+ +   G+ FW   G  I + +  Y+  R++ D Y+ + TP 
Sbjct: 238 AKERDHRKLGKELDLFMISPEVGQGLPFWLPDGATIRRIVERYITDREVNDGYQHVYTPP 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L++ SGHW+ Y+ +MF          D   F L+PMNCP H+ V+ + + SYREL
Sbjct: 298 LASVDLYKTSGHWEHYQEDMFPPMDMG----DGEQFVLRPMNCPHHIEVYKNHVHSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  T +D+H+F   EQ+  E   + +L+I +YKDF
Sbjct: 354 PIRIAELGMMHRFEKSGALSGLQRVREMTLNDSHLFVMPEQIQEEFKHVLDLMIDVYKDF 413

Query: 419 GFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
                  +LS R      K   +D +W++A+ ++KG +D +       ++     GE AF
Sbjct: 414 NITDYRFRLSYRDPNDKHKYFDNDEMWENAQRMLKGAMDDLG------LDYFEAEGEAAF 467

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K A+G +    TIQ+DF LP RF+  Y+ +  E+  PVMIHR +  ++ERF
Sbjct: 468 YGPKLDVQVKTALGNEETLSTIQLDFLLPERFDLHYIGADGEEHRPVMIHRGIVSTMERF 527

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINY 593
           I  +IE +KG  P WL+P Q  V  I++    +YA ++A  L++  + ++ D RNE + Y
Sbjct: 528 IAYLIETYKGAFPTWLAPHQVTVIPISNEAHADYAWKVAKELRNRGVRVDVDERNEKMQY 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR+    K+P  +I GDKE ++ ++ +RR+GS  T   ++ + +  +  +
Sbjct: 588 KIRQSQTHKVPYQLIVGDKEQADGTVNVRRYGSKQTHTETVAEFVNHILAD 638


>gi|257869188|ref|ZP_05648841.1| threonyl-tRNA synthetase [Enterococcus gallinarum EG2]
 gi|257803352|gb|EEV32174.1| threonyl-tRNA synthetase [Enterococcus gallinarum EG2]
          Length = 646

 Score =  646 bits (1667), Expect = 0.0,   Method: Composition-based stats.
 Identities = 258/650 (39%), Positives = 401/650 (61%), Gaps = 23/650 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           + +TFPDG+ K F V  T  ++AE IS+SLAKKA+A  +NG++ DL   +  +  IEI+T
Sbjct: 3   LTITFPDGAKKEFAVGITTKEIAEGISKSLAKKALAGKVNGQLIDLDRGIEEDAQIEIVT 62

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQI 122
           P+   +L ++RHS AH+MA+A++ ++P +   +GP I+ GFYYD D  E P ++++L  I
Sbjct: 63  PDHEDALGLVRHSAAHLMAQAMRRLYPNIHFGVGPAIDTGFYYDTDNGESPITAEDLPAI 122

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M +I+  + P  ++ LS ++A ELF    + YKVE++  +P  E +T Y+QGE+ DL
Sbjct: 123 EAEMMKIVKENLPIERRVLSKKEALELFAE--DPYKVELISELPEDETITAYQQGEFVDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG+++ F KL+ VAGAYWRG+SN  M+ R+YGTA+  ++EL +++   EE++
Sbjct: 181 CRGPHVPSTGRIQVF-KLLSVAGAYWRGNSNNQMMQRVYGTAFFDKKELKEFIRLREEAK 239

Query: 243 KRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVL 300
           +RDHRKL +E+DLF ++ +   G+ FW  KG  I +T+  Y+  +++   Y+ + TP + 
Sbjct: 240 ERDHRKLGKELDLFMLSPEVGAGLPFWLPKGATIRRTIERYIVDKEVSLGYQHVYTPIMA 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  L++ SGHWD Y  +MF          D     L+PMNCP H+ V+ + + SYRELP+
Sbjct: 300 NVDLYKTSGHWDHYHEDMFPPMDMG----DGEMLVLRPMNCPHHMMVYKNDIHSYRELPI 355

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  +  +L++ +YKDF  
Sbjct: 356 RIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLDLMVEVYKDFNV 415

Query: 421 EKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
                +LS R      K    DA+W++A+ ++K  +D +       ++     GE AFYG
Sbjct: 416 TDYRFRLSYRDPENKDKYFDDDAMWENAQTMLKAAMDELN------LDYFEAEGEAAFYG 469

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK-CHPVMIHRAVFGSIERFI 535
           PK +  +K A+G +    TIQ+DF LP RF+  YV    E    PV+IHR +  ++ERF+
Sbjct: 470 PKLDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTMERFV 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             + E +KG  P WL+PIQA +  ++  +  +YA EI   L+S  L +E D RNE + YK
Sbjct: 530 AYLTEVYKGAFPTWLAPIQATIIPVSVDAHSDYAYEIKERLQSQGLRVEVDDRNEKMGYK 589

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IR   ++KIP  ++ GD+E  + ++ IRR+GS  T    L   +  +  E
Sbjct: 590 IRASQMQKIPYQLVVGDQEVKDATVNIRRYGSKETNVEELNIFVDAMAAE 639


>gi|326201674|ref|ZP_08191545.1| threonyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
 gi|325988274|gb|EGD49099.1| threonyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
          Length = 635

 Score =  646 bits (1667), Expect = 0.0,   Method: Composition-based stats.
 Identities = 287/643 (44%), Positives = 410/643 (63%), Gaps = 16/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            IK+T  DG IK +    T  +VAESIS  LA+ A+A  ++G+V +L   +     + ++
Sbjct: 1   MIKITLKDGIIKKYQEGVTVREVAESISAGLARAALAGEVDGRVTELDSKLESNCRLNLL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D     V RH+ +H++A+AV+ ++P+V++AIGP I+ G+YYDF++E+PFS DEL  I
Sbjct: 61  TFDDEGGRLVYRHTASHVLAQAVKRLYPDVKLAIGPAIDSGYYYDFEREKPFSIDELESI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M++II  D    +  L   +A +  E K E+YKVE+++ +P  E ++ Y+QG++ DL
Sbjct: 121 EKEMEKIIKEDLKLERFSLPRNEAIKFMEEKAESYKVELIKDLPEGEEISFYKQGDFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPH+  T ++K   KL+ VAGAYWRG+    ML RIYGTA+  + +L +YL+ +EE++
Sbjct: 181 CAGPHLSGTVKLK-AIKLLSVAGAYWRGNEKNKMLQRIYGTAFPKKSQLDEYLFRMEEAK 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLD 301
           KRDHRKL RE+DLF I ++G G  F+  KG  +   L  + R    K  Y+EI TP +L+
Sbjct: 240 KRDHRKLGRELDLFDILDEGPGFPFFMPKGMVLRNLLEDFWRSEHKKAGYQEIKTPVILN 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW +SGHWD+Y+ NM+ V        D + +A+KPMNCPG + VF   L SYR+LP R
Sbjct: 300 KELWLRSGHWDTYKENMYTV------DIDEQEYAIKPMNCPGGILVFKRKLHSYRDLPQR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           + E G V+R+E SG+LHGLMRVR FTQDDAH+F T EQ+ +E + + NLI   YK FGF+
Sbjct: 354 MGELGLVHRHELSGALHGLMRVRCFTQDDAHIFMTPEQITDEIVGVINLIDDFYKVFGFK 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPE  +GSD +W+ +   ++  LD         I   V  G+GAFYGPK ++
Sbjct: 414 YN-VELSTRPENSIGSDEMWELSTQGLRKALDL------KGIKYTVNEGDGAFYGPKIDF 466

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L+D+IGR WQCGTIQ+D NLP RF+  Y+    EK  PVMIHR VFGSIERFI I+ E+
Sbjct: 467 HLEDSIGRTWQCGTIQLDMNLPERFDLSYIGPDGEKHRPVMIHRVVFGSIERFIAILTEH 526

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           F G  P WLSP+Q  +  +     +YA E+  LL++ ++ +E D RNE I YKIRE  + 
Sbjct: 527 FAGAFPAWLSPVQVKILPLVDKHHDYAFEVKKLLEAENVRVEVDSRNEKIGYKIREAQMD 586

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K P +++ GDKE   R + +R         +S       +  E
Sbjct: 587 KTPYMLVIGDKELEGRLVSVRSRRDGDLGAISPEQFAEKILDE 629


>gi|167752344|ref|ZP_02424471.1| hypothetical protein ALIPUT_00588 [Alistipes putredinis DSM 17216]
 gi|167660585|gb|EDS04715.1| hypothetical protein ALIPUT_00588 [Alistipes putredinis DSM 17216]
          Length = 651

 Score =  646 bits (1667), Expect = 0.0,   Method: Composition-based stats.
 Identities = 251/647 (38%), Positives = 388/647 (59%), Gaps = 18/647 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            IK+TFPDG++K F    T   +AESIS  LA  ++A ++NG   DL+  +  + SI+  
Sbjct: 1   MIKITFPDGNVKEFAKGTTAYQIAESISPRLAADSLAASVNGATVDLNRAIEEDASIKFY 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
             +DP       H+ +H++AEA+++++P ++  IGP IE+GFYYD D   P +  +L  I
Sbjct: 61  KWDDPEGKHAFWHTSSHLLAEALEALYPGIKFGIGPAIENGFYYDVDSPVPITEADLETI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EKKM E+       ++  +S   A + F  K + YKVE++  +     ++ Y  G + DL
Sbjct: 121 EKKMIELSRNKEQLIRTEVSKADALKNFTEKGDPYKVELIRDL-EDGTISFYTNGAFTDL 179

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ +TG +K   KL  VAGAYWRG+    ML+RIYG ++  +  L +YL  +EE++
Sbjct: 180 CRGPHLPNTGLIK-AIKLTSVAGAYWRGNEKNKMLTRIYGISFPKKSMLDEYLAMMEEAK 238

Query: 243 KRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           KRDHRKL +E++LF      G G+  W  KG  +   L  ++R  + +  Y+++ TP + 
Sbjct: 239 KRDHRKLGKELELFCFSQRVGQGLPLWLPKGAALRDRLEQFLRGVQKEYGYQQVITPHIG 298

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ L+  SGH+  Y  + F       T  +   + LKPMNCP H  ++    +SY+ELPV
Sbjct: 299 NKELYVTSGHYAKYGKDSFQ---PIHTPIEGEEYLLKPMNCPHHCEIYRSKPRSYKELPV 355

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLAEFG+VYR E SG LHGL RVRGFTQDDAH+F   +Q+  E  K+ ++++ I+K   F
Sbjct: 356 RLAEFGTVYRYEQSGELHGLTRVRGFTQDDAHMFVRPDQLLEEFEKVIDIVLYIFKTLKF 415

Query: 421 EKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           +    ++S R        +GSD  W+ AE+ +      I+ + +  +NT +  GE AFYG
Sbjct: 416 DNYTAQISLRDPNNKEKYIGSDENWEKAESAI------IQAAKEKGLNTVIEYGEAAFYG 469

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK +++++DAIGR WQ GTIQVD+NLP RF+  Y  +  +   P+MIHRA FGS+ERF+ 
Sbjct: 470 PKLDFMVRDAIGRKWQLGTIQVDYNLPERFDLTYKGADDKMHRPIMIHRAPFGSMERFVA 529

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +++E+  G  PLWLSP Q +V  I+    +YA++++  L  + +  + D RNE I  KIR
Sbjct: 530 VLLEHTGGKFPLWLSPDQVVVLPISEKFNDYAEKVSAYLNKYDIRSQVDDRNEKIGRKIR 589

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           ++ +K+IP ++I G+KE +E  + +R  G     +++L      +T 
Sbjct: 590 DNELKRIPYLLIVGEKEEAEGLVSVRAQGEGDKGQMTLEAFRDYMTD 636


>gi|126650283|ref|ZP_01722511.1| threonyl-tRNA synthetase [Bacillus sp. B14905]
 gi|126592933|gb|EAZ86915.1| threonyl-tRNA synthetase [Bacillus sp. B14905]
          Length = 637

 Score =  646 bits (1667), Expect = 0.0,   Method: Composition-based stats.
 Identities = 284/646 (43%), Positives = 423/646 (65%), Gaps = 19/646 (2%)

Query: 1   MPSD-IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGS 58
           M +  I + FPDG  + F    T +++A++I   L KKAVA ++NG + DL+ P+  +  
Sbjct: 1   MSNQVIHIQFPDGQQQAFTKGVTLTEIAQAIRPELRKKAVAGSVNGTIVDLTRPIMEDAQ 60

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           I +        + VIRHS AH++A+AV+ ++P  Q  +GP+IE+GFYYD D     +  +
Sbjct: 61  ITLYDASSKEGIEVIRHSTAHLLAQAVKRLYPHAQFGVGPVIENGFYYDIDIADTLALSD 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L QIEK M++I+  +    ++ +S  +A+EL     +A K+E+LESIPA E VT+Y QGE
Sbjct: 121 LQQIEKTMKQIVRENVQIKRREVSRNEAKEL--FAHDALKLELLESIPADETVTIYEQGE 178

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           ++DLCRG HV STG+++ F  +  V+GAYWRGDS+  ML RIYG A+ T++EL QY  FL
Sbjct: 179 FYDLCRGSHVPSTGKLQHFQLMH-VSGAYWRGDSDNQMLQRIYGVAFATKEELQQYFVFL 237

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTP 297
           +E+EKR+HRKL +E+ LF  +E+  G+ F+   G  +   L SY+R  + K DY E+ TP
Sbjct: 238 DEAEKRNHRKLGKELSLFMFSEEAPGMPFYLANGQILRNELESYLRNLQAKYDYREVRTP 297

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +++Q LW+QSGHWD Y+ NM+  +       D ++FALKPMNCPGH+ +F + L SYR+
Sbjct: 298 LMMNQRLWEQSGHWDHYKDNMYFTQV------DDQSFALKPMNCPGHMLIFKNSLHSYRD 351

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFG V+R+E SG+L+GL+RVR F QDDAH+F T +Q+ NE      +I  +Y  
Sbjct: 352 LPIRMAEFGQVHRHEFSGALNGLLRVRSFCQDDAHIFATPQQIENEIALALKIIDEVYNV 411

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF+   V+LSTRP+  +G  +LWD AE  ++ VL  +       I+  +  G+GAFYGP
Sbjct: 412 FGFQYS-VELSTRPDDYMGELSLWDQAEEALENVLTNLG------IDYTINEGDGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  +KDAI R  QC T+Q+DF LP +F+  Y+N H+EK  PV+IHRAVFGSI+RF+GI
Sbjct: 465 KIDIHIKDAIQRSHQCATVQLDFQLPEKFDLTYINEHNEKVRPVVIHRAVFGSIDRFLGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE+F G  P+WL+P Q  V  +  +  +YA+++   L+   + ++ D R E +  KIRE
Sbjct: 525 LIEHFGGAFPIWLAPQQVQVIAVADAHQDYAKQVVKALQHEQIRVQLDDRQEKLGKKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             + KIP I++ GD+E + +++ +RR G   T + S+   I  +T+
Sbjct: 585 AQLHKIPYILVIGDRETAHQNVSVRRHGQQATVEYSISQLIEEMTE 630


>gi|289422357|ref|ZP_06424203.1| threonine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
 gi|289157192|gb|EFD05811.1| threonine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
          Length = 641

 Score =  646 bits (1667), Expect = 0.0,   Method: Composition-based stats.
 Identities = 265/643 (41%), Positives = 403/643 (62%), Gaps = 16/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+   DGS+  F    +  DVA+ IS   A+  +  +++G++  L++ + ++  +   
Sbjct: 1   MIKVELKDGSVLEFEDGVSLLDVAKGISDGFARSVLVGSVDGRMASLNEKLDKDCKVNFF 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
             +D     V RH+ AHI A+AV+ +WP+ ++AIGP I++GFYYD D +     ++L +I
Sbjct: 61  KFDDAEGKEVFRHTSAHIFAQAVKRLWPQAKLAIGPAIDNGFYYDIDLDYRLVPEDLEKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M++I+  D       +S E+A ++ +   E YKVE++E +PA+E +++YRQG++ DL
Sbjct: 121 EAEMKKIVKEDLKIEGFEVSREEAIKMMKEIGEDYKVEMIEDLPAEEVISMYRQGDFVDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH++ST +VK F KL  +AGAYWRGD N  ML R+YGT++   ++L  YL  LEE++
Sbjct: 181 CRGPHLQSTKKVKAF-KLQSIAGAYWRGDENNKMLQRVYGTSFEKNKDLEAYLKMLEEAK 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KRDHRK+ +E+ LF I E+G G   +  +G  + Q+L+ Y      +  Y EI TP +L+
Sbjct: 240 KRDHRKIGKELGLFMIPEEGPGFPLFLPRGTALKQSLMKYWEEIHREAHYVEIETPIILN 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW  Y+ NM+ V+       D   +A+KPMNCPG +  +   L SYR+ P+R
Sbjct: 300 RKLWETSGHWFHYKENMYTVQI------DEEDYAIKPMNCPGAMLYYKSQLHSYRDFPMR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           + E G V+R+E SG+LHGLMRVR FTQDDAH+F   EQ+ +E   + NLI  +Y  FGF 
Sbjct: 354 VGERGRVHRHELSGALHGLMRVRAFTQDDAHIFMLPEQIRDEIKGVVNLIDKVYTKFGFS 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPE  +G+D  W  AE+ ++G L+ +       ++  V  G+GAFYGPK ++
Sbjct: 414 YH-VELSTRPEDSMGTDEEWAIAEDGLRGALEELG------MDYIVNEGDGAFYGPKIDF 466

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L+D IGR WQCGTIQ+D  LP RF+A YV    EK  P+MIHR   GSIERFIGI+IEN
Sbjct: 467 HLRDCIGRTWQCGTIQLDMQLPQRFDATYVGKDGEKHRPIMIHRVALGSIERFIGILIEN 526

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  P+WL+P Q  V +++    E+A+E+   L    + +E D R E + +KIRE  ++
Sbjct: 527 YAGKFPVWLAPCQVKVLSVSDKYNEFAKELVEKLFDAGIRVELDDRAEKVGFKIREAQLE 586

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIP +++ G+KE     + +R        ++S+ + +  + K+
Sbjct: 587 KIPYMLVVGEKEMESGLLSVRSRDEGELGQMSIDEFLAKIKKQ 629


>gi|27468275|ref|NP_764912.1| threonyl-tRNA synthetase 1 [Staphylococcus epidermidis ATCC 12228]
 gi|293366369|ref|ZP_06613048.1| threonine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|38258358|sp|Q8CS74|SYT_STAES RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|27315821|gb|AAO04956.1|AE016748_190 threonyl-tRNA synthetase 1 [Staphylococcus epidermidis ATCC 12228]
 gi|291319494|gb|EFE59861.1| threonine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|329733742|gb|EGG70068.1| threonine--tRNA ligase [Staphylococcus epidermidis VCU045]
 gi|329737259|gb|EGG73513.1| threonine--tRNA ligase [Staphylococcus epidermidis VCU028]
          Length = 645

 Score =  646 bits (1666), Expect = 0.0,   Method: Composition-based stats.
 Identities = 259/650 (39%), Positives = 406/650 (62%), Gaps = 21/650 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           + I + FPDG+ K F    T  D+A+SIS  L KKAVA   NG++ DL+ P+  +G+IEI
Sbjct: 2   NQINIQFPDGNTKEFDKGTTTEDIAQSISPGLRKKAVAGKFNGQLVDLTRPLEQDGAIEI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           ITP    +L V+RHS AH+MA+A++ ++ +V+  +GP+IE GFYYDFD +   SSD+  +
Sbjct: 62  ITPGSEEALEVLRHSTAHLMAQALKRLYGDVKFGVGPVIEGGFYYDFDMDDKVSSDDFDK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK M++I+  +   +++ +S EKA++ F+   + YK+E++++IP  E+VTLY QGE+ D
Sbjct: 122 IEKTMKQIVNENHKIVREVVSKEKAKDFFK--DDPYKLELIDAIPEDESVTLYTQGEFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG HV ST ++K+F KL+  AGAYWRG+S+  ML RIYGTA+  +++L  +L  LEE 
Sbjct: 180 LCRGVHVPSTSKIKEF-KLLSTAGAYWRGNSDNKMLQRIYGTAFFDKKDLKAHLKMLEER 238

Query: 242 EKRDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
            +RDHRK+ ++++LF +    G+G+  W   G  I + +  Y+  +++   Y+ + TP +
Sbjct: 239 RERDHRKIGKDLELFTNNQLVGAGLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVL 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +  L++ SGHWD Y+ +MF     D+         L+PMNCP H+ ++ +   SYRELP
Sbjct: 299 ANVDLYKTSGHWDHYQEDMFPAMKLDED----EAMVLRPMNCPHHMMIYKNKPHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G+++R E SG++ GL RVRG T +D+H+F   +Q+  E  ++ N+I  +YKDFG
Sbjct: 355 IRIAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVNMIQDVYKDFG 414

Query: 420 FEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           FE    +LS R      K    D +W+ AE+++K   D +  + ++ I      GE AFY
Sbjct: 415 FEDYRFRLSYRDPEDKHKYFDDDEMWEKAESMLKEASDELGLTYEEAI------GEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G++    T Q+DF LP RF+  Y+    E+  PV+IHR V  ++ERF+
Sbjct: 469 GPKLDVQVKTAMGKEETLSTAQLDFLLPERFDLTYIGQDGEQHRPVVIHRGVVSTMERFV 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             + E  KG  P WL+P+Q  +  +      +YA+ + + LKS  + +E D RNE + YK
Sbjct: 529 AFLTEETKGAFPTWLAPMQVEIIPVNIDLHYDYARLLQDELKSQGVRVEIDDRNEKMGYK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IRE  +KKIP  I+ GD+E   + + +R++GS   + V   + I  +  E
Sbjct: 589 IREAQMKKIPYQIVVGDQEVEHQEVNVRKYGSEKQESVEKDEFIWNVIDE 638


>gi|295105820|emb|CBL03363.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Gordonibacter
           pamelaeae 7-10-1-b]
          Length = 637

 Score =  646 bits (1666), Expect = 0.0,   Method: Composition-based stats.
 Identities = 270/647 (41%), Positives = 399/647 (61%), Gaps = 15/647 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           + +  PDGS K     AT +DVA SI   LAK A+A  +N +  DLS PV EG S+ I+T
Sbjct: 1   MDIVLPDGSGKELADGATVADVAASIGVGLAKAALAGIVNDQPVDLSAPVAEGDSVAIVT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +    L ++RHS AH+MA A+  ++ +VQ  +GP IE GFYYD    +  S D+ A IE
Sbjct: 61  AKSDEGLELLRHSTAHVMAAALVDLYGDVQFGVGPAIEGGFYYDVKTGRALSPDDFAAIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M EI+  D PF ++ ++  +A ++     + +K+E++  +P    +T Y  G++ DLC
Sbjct: 121 ARMAEIVKADEPFERRVVTRAEAEDI--FADQPFKLELIAELPEDAVITTYTIGKFTDLC 178

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG++  F KL K+AGAYWRGD+ R ML+RIYGTA+  Q+EL +++  LEE+EK
Sbjct: 179 RGPHLPSTGKLGAF-KLTKLAGAYWRGDAEREMLTRIYGTAFFKQKELDEHVRNLEEAEK 237

Query: 244 RDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLD 301
           RDHRKL RE+ ++ +      G+  +  KG +I +TL  ++RR      YEE+ TP + +
Sbjct: 238 RDHRKLGRELGIYVMDPLAGAGLPLYLPKGARIIRTLQEWLRRDLYTRGYEEVITPHIYN 297

Query: 302 QHLWQQSGHWDSYRANMFAVK--CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             +W+ SGH+  Y+ NM+  +    DD    +  +A+KPMNCPGHV ++   L SYR+LP
Sbjct: 298 ADVWKTSGHYGFYKENMYFFEINEGDDENPRMTEYAVKPMNCPGHVMLYKSELHSYRDLP 357

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R  EFG+VYR+E SG +HGL+R RGFTQDDAHVFCT++Q+ +E + I  L+  I   FG
Sbjct: 358 LRYFEFGTVYRHEMSGVVHGLLRARGFTQDDAHVFCTRDQVVDEVVAILGLVDHIMSTFG 417

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           FE    ++STRPEK +G+D +W+ A   +K   +      +  ++  +  G+GAFYGPK 
Sbjct: 418 FEYEA-EISTRPEKSIGTDDMWEHATGALKEACE------RHGLSYDINEGDGAFYGPKI 470

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +  +KDAIGR WQC T+QVDFN+P RF   Y    + +  P M+HRA+FGSIERF+GI+I
Sbjct: 471 DIKVKDAIGRTWQCSTVQVDFNMPERFGLTYRTEDNTEERPWMLHRAIFGSIERFLGILI 530

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E++ G LPLWL+P+QA V  +     E A E+A  L      +E   +NE +  KI +  
Sbjct: 531 EHYAGALPLWLAPVQAAVLPLADRHNEAAHELALKLADAGGRVEVYDQNEPMRVKIAKAQ 590

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
            +KIP +++ GDKE    ++ +R           +   +  +   +L
Sbjct: 591 SQKIPYMVVLGDKEIENGTVSVRERHEGDLGAWDVEKLVQTIKDAAL 637


>gi|86131542|ref|ZP_01050140.1| Threonyl-tRNA synthetase [Dokdonia donghaensis MED134]
 gi|85817987|gb|EAQ39155.1| Threonyl-tRNA synthetase [Dokdonia donghaensis MED134]
          Length = 647

 Score =  646 bits (1666), Expect = 0.0,   Method: Composition-based stats.
 Identities = 262/649 (40%), Positives = 393/649 (60%), Gaps = 19/649 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +T PDG++K     AT  DVA+SIS  LA+  ++   NG+  + S P+  +GSI + 
Sbjct: 1   MINITLPDGNVKQIDKGATPMDVAKSISEGLARNVISAKFNGETVETSTPLTEDGSITLF 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
           T  D       RHS +H++A+A+  ++P  ++ IGP IE+GFYYD D  +Q  S  +  +
Sbjct: 61  TWNDEEGKTAFRHSSSHVLAQAILKLYPGAKLTIGPAIENGFYYDVDLGDQTISDKDFKK 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE KM EI      F  + ++ ++A + ++ +   +KVE++E++     +T     ++ D
Sbjct: 121 IEDKMLEIARGKHDFKMRSVTKQEALDKYKCEGNEFKVELIENL-EDGTITFCDHDDFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG H+ +TG +K   K+M VAGAYWRGD N+P L+R+YGT++  Q++L QYL  LEE+
Sbjct: 180 LCRGGHIPNTGIIK-AVKIMSVAGAYWRGDENKPQLTRVYGTSFPKQKDLKQYLELLEEA 238

Query: 242 EKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           +KRDHRKL +E++LF      G G+  W  KG  + + L ++++  + K  YE + +P +
Sbjct: 239 KKRDHRKLGKELELFTFSQRVGQGLPLWLPKGAALRERLENFLKAAQKKQGYEMVVSPHI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             + L++ SGH+  Y A+ F       T  +   F LKPMNCP H  ++N    SY+ELP
Sbjct: 299 GQKELYETSGHYAKYGADSFQ---PIQTPNEGEEFLLKPMNCPHHCEIYNSRPWSYKELP 355

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
            R AEFG+VYR E SG LHGL RVRGFTQDDAH+FCT +Q+  E +K+ +L++ ++   G
Sbjct: 356 KRFAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCTPDQLDEEFMKVIDLVLYVFGSLG 415

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           FE    ++S R  +     +G D  W  AEN +              +N  V  GE AFY
Sbjct: 416 FEDFTAQVSLRDPENPDKYIGEDENWVKAENAILNAAKA------KGLNYVVETGEAAFY 469

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDA+GR WQ GTIQVD+NLP RF   Y  S +E   PVMIHRA FGS+ERF+
Sbjct: 470 GPKLDFMVKDALGRSWQLGTIQVDYNLPERFELQYKGSDNEMHRPVMIHRAPFGSMERFV 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            I++E+  GN PLWL P QA + T++    +YAQ + NLL++H +    D R ET+  KI
Sbjct: 530 AILLEHTGGNFPLWLMPQQATILTLSEKYEKYAQNVLNLLENHEIRALIDNRGETMGKKI 589

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           RE  ++K+P ++I G++E  + +I +RR G      +++     I++ E
Sbjct: 590 REAEMQKLPFMLIIGEQEEKDGTISVRRHGGEDLGSMTIDAFAKIVSTE 638


>gi|197122302|ref|YP_002134253.1| threonyl-tRNA synthetase [Anaeromyxobacter sp. K]
 gi|238689843|sp|B4UAM8|SYT_ANASK RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|196172151|gb|ACG73124.1| threonyl-tRNA synthetase [Anaeromyxobacter sp. K]
          Length = 650

 Score =  646 bits (1665), Expect = 0.0,   Method: Composition-based stats.
 Identities = 272/657 (41%), Positives = 392/657 (59%), Gaps = 17/657 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAE-SISRSLAKKAVAVAINGKVCDLSDPVR-EGS 58
           M   +K+T PDGS K  P      D  +  I   LAK A    ++G+  DLS  +  +  
Sbjct: 1   MSDLVKVTLPDGSQKEAPRGTPVIDFVKGQIGPGLAKAAYFARLDGEPVDLSRAIERDAR 60

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           +EI+T   P +L V RH  AH+MA  VQ ++P  QV IGP IEDGFYYDF +E PF+ ++
Sbjct: 61  LEIVTTRSPEALEVARHDAAHVMASVVQKLYPGTQVTIGPAIEDGFYYDFARETPFTPED 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKE--NVTLYRQ 176
           L +IEK   E I  D PF++  +S E A  LFE   E YKVEI++ I AK    +TLY+ 
Sbjct: 121 LERIEKATNEAIKADLPFVRSEISMEAALALFEGMGERYKVEIVKDIAAKGAKTLTLYKH 180

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           G+W D C GPH  STG++    KL+ VAGAYWRGD+   ML RIYGTA+  ++EL  +L 
Sbjct: 181 GDWVDFCLGPHGPSTGRIGVV-KLLNVAGAYWRGDAKNAMLQRIYGTAFFDKKELDAHLA 239

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEIN 295
            LEE +KRDHR+L  ++ LF   E   G  FW   G  ++  L   MRR  +K+ Y+E+ 
Sbjct: 240 KLEEVKKRDHRRLGPQLGLFTFHEFAPGAPFWLPAGTVLYNVLEDAMRRLVLKNGYQEVK 299

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTI----KDLRTFALKPMNCPGHVAVFNHG 351
           TP + ++ LW+ SGHW  YR NMF V  ++       +D  +F+LKPMNCP H  ++   
Sbjct: 300 TPLLFNKRLWETSGHWGKYRENMFLVVDSESDPALPLEDRCSFSLKPMNCPSHHLIYRMD 359

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI 411
            +SYRELPVR     +++RNE SGSL GL RVR F QDDAH++  +EQ+ +E L+I  L+
Sbjct: 360 KRSYRELPVRYFTTDALHRNEASGSLGGLTRVRQFEQDDAHIYLREEQVTDEVLRIFELM 419

Query: 412 ISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
             +Y  FG        STRPE+R+G DALWD AE +++  LD         +   +  G+
Sbjct: 420 KVVYGAFGLG-FEATFSTRPEQRIGDDALWDRAEALLRKSLDATG------LKWTLNAGD 472

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
           GAFYGPK + ++ D++GR WQ  TIQ+D+  P RF+  +V   +++  PV+IHRA++GS 
Sbjct: 473 GAFYGPKIDMLVTDSLGRKWQTCTIQLDYAAPERFDLTFVGEDNKEHRPVVIHRAIYGSF 532

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           ERF+ I++E++ G  P WL+P+QA V T++     +A+E    L++    +E D  ++ +
Sbjct: 533 ERFVAILVEHYAGAFPAWLAPVQARVVTVSDRFEAWAREAGEALQARGWRVEVDASSDKL 592

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
             KIR   + KIP  ++ G+KE   + +  RR G    + + L     ++T+E+  P
Sbjct: 593 GAKIRNAQLAKIPFTLVVGEKEVEAKGVSPRRHGGEDLKTMPLEAFAELMTREATAP 649


>gi|189424928|ref|YP_001952105.1| threonyl-tRNA synthetase [Geobacter lovleyi SZ]
 gi|189421187|gb|ACD95585.1| threonyl-tRNA synthetase [Geobacter lovleyi SZ]
          Length = 646

 Score =  645 bits (1664), Expect = 0.0,   Method: Composition-based stats.
 Identities = 290/646 (44%), Positives = 412/646 (63%), Gaps = 18/646 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEI 61
           S I++T PD SI+     AT +D+A SI   LAK A+A  +NG + DLS P+ +G  + I
Sbjct: 12  SMIQVTLPDNSIRELADGATVADLAASIGAGLAKAALAGQVNGLLVDLSTPLADGDNVAI 71

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           IT + P +L +IRHS +H+MA+AV+ ++P  +V IGP +E+GFYYDFD   PF+ ++L +
Sbjct: 72  ITEKSPEALEIIRHSTSHLMAQAVKELFPAAKVTIGPAVENGFYYDFDVAAPFTPEDLEK 131

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK+M E+ A   P  ++ +S  +A   FE   E YK E++E I A E V++Y QGE+ D
Sbjct: 132 IEKRMAELAAAGQPLTRKVMSAAEAIAFFEQMGEPYKKELIEGIGA-ETVSIYTQGEFAD 190

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV +T ++K F KL+ +AGAYWRGD    ML RIYGTA+  ++EL  YL+ LEE+
Sbjct: 191 LCRGPHVPNTNKLKAF-KLLSIAGAYWRGDEKNRMLQRIYGTAFVDKKELEAYLHRLEEA 249

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQV 299
           ++RDHRKL RE+DLF   ++   G   WH KG  +   L  + R   +K DY+ +  PQ+
Sbjct: 250 KRRDHRKLGRELDLFSFNDEVGAGFAIWHPKGAMLRTLLEDFERKEHLKRDYDIVVGPQI 309

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           L   LWQ+SGH+D+YR NM+  +       D ++F +KPMNC  H+ ++   L+SYR+LP
Sbjct: 310 LKTELWQRSGHYDNYRENMYFTEV------DEQSFGVKPMNCLSHMMIYKSQLRSYRDLP 363

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
            R  E G+V+R+E +G LHGL+RVR FTQDDAH+ CT EQ+  E   +   +  +   FG
Sbjct: 364 QRYFELGTVHRHERAGVLHGLLRVRCFTQDDAHILCTPEQLDAEIKGVLKFVSDVMGIFG 423

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           FE  M +LSTRPEK +GSD  W+ A   + G L           +  +  G+GAFYGPK 
Sbjct: 424 FEYEM-ELSTRPEKSIGSDEDWERATGALLGALKDTGR------DFEINEGDGAFYGPKI 476

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +  L+D + R WQC TIQ DF LP RF+  YV S  EK  PVM+HR + GSIERFIG++I
Sbjct: 477 DIKLRDCLDRRWQCATIQCDFTLPERFDLTYVASDGEKKRPVMVHRVILGSIERFIGVLI 536

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E+F GN PLWL+P+QA+V T+T + + YAQE+   L+S  + ++ D RNE +N+KIRE  
Sbjct: 537 EHFAGNFPLWLAPVQAVVLTVTDNQIPYAQEVYKQLRSAGIRVQEDLRNEKLNFKIREAQ 596

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           ++KIP +++ GDKE  + ++  R         +     I  +  E+
Sbjct: 597 LQKIPYMLVIGDKEVEQGTVTPRFRDGKNLHAMKPDAFIAFVEAET 642


>gi|260583498|ref|ZP_05851246.1| threonine--tRNA ligase [Granulicatella elegans ATCC 700633]
 gi|260158124|gb|EEW93192.1| threonine--tRNA ligase [Granulicatella elegans ATCC 700633]
          Length = 647

 Score =  645 bits (1664), Expect = 0.0,   Method: Composition-based stats.
 Identities = 252/650 (38%), Positives = 396/650 (60%), Gaps = 22/650 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+TFPDG++K F    +  +VAESIS+SLAKKA+A  +NG++ DL   +  + SIEI+
Sbjct: 1   MIKVTFPDGAVKEFEQGISVKEVAESISKSLAKKALAGKVNGELVDLDQALTEDASIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TP+   +L ++RHS AH++A A+  ++P +   +GP IE GFYYD D     + D L ++
Sbjct: 61  TPDHEDALGILRHSTAHLLAHALTRLYPGIHFGVGPAIESGFYYDTDMPNQLTEDALPEV 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M +I+  + P +++ +S  +A E+     + YKVE++  +P  E +++Y+Q ++ DL
Sbjct: 121 EAEMMKIVKENYPIVRREVSRAEALEI--FANDPYKVELINGLPEDETISVYQQEDFVDL 178

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRG HV STG+++ F KL+ +AGAYWRG+S+  M+ R+YGTA+  + +L ++L   EE++
Sbjct: 179 CRGIHVPSTGRIQVF-KLLSLAGAYWRGNSDNKMMQRVYGTAFFDKADLKEFLKMREEAK 237

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVL 300
           +RDHRKL +E+DLF I+++ GSG+ FW  KG  I +T+  Y+  ++I   Y+ + TP + 
Sbjct: 238 ERDHRKLGKELDLFMISQEVGSGLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPVMA 297

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D  L++ SGHW  Y+ +MF          D     L+PMNCP H+ V+ + + SYRELP+
Sbjct: 298 DVGLYKTSGHWAHYQEDMFPPMDMG----DGELLVLRPMNCPHHMMVYKNHIHSYRELPI 353

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  +I +LI  +YKDF  
Sbjct: 354 RIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRILDLIREVYKDFNV 413

Query: 421 EKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           +    +LS R      K    D +W+ AE ++K  +D +       +     +GE AFYG
Sbjct: 414 KDYRFRLSYRDPEDKHKYFDDDEMWNKAEAMLKEAMDEMG------LEYFEAIGEAAFYG 467

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK-CHPVMIHRAVFGSIERFI 535
           PK +   K A+G +    TIQ+DF LP RF+  YV    +    PV+IHR V  + ERF+
Sbjct: 468 PKLDIQFKTAMGLEETMSTIQLDFLLPERFDLTYVGEDGDNTHRPVVIHRGVVSTAERFV 527

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAV-EYAQEIANLLKSHHLSIETDFRNETINYK 594
             +IE +KG  P WL+P+QA +  ++     + A+ +   + S  L +E D RNE + YK
Sbjct: 528 AYLIEEYKGAFPTWLAPVQATIIPVSVEHHYDAARALKEKMMSLGLRVELDDRNEKMGYK 587

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IR    +KIP  ++ GDKE  E ++ +RR+GS  T  +++   +  + +E
Sbjct: 588 IRASQTQKIPYQLVIGDKEVEEGTVTVRRYGSKETVSMTIGAYLERVQRE 637


>gi|301629969|ref|XP_002944104.1| PREDICTED: threonyl-tRNA synthetase-like [Xenopus (Silurana)
           tropicalis]
          Length = 841

 Score =  645 bits (1664), Expect = 0.0,   Method: Composition-based stats.
 Identities = 320/647 (49%), Positives = 446/647 (68%), Gaps = 19/647 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEII 62
            +++T PDGS + +P   T +DVA SI   LAK A+A  I+GKV D S  + + S + II
Sbjct: 1   MLQITLPDGSRRAYPGPVTVADVAASIGAGLAKAALAGKIDGKVVDTSYQITQDSPLSII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +DP  L +IRHS AH++A AV+ ++P+ QV IGP+IE+GFYYDF  ++PF+ ++L  I
Sbjct: 61  TAKDPEGLELIRHSTAHLLAYAVKELFPQAQVTIGPVIENGFYYDFSYQRPFTPEDLVAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M E+ A+D P +++ L  ++A   F+   E YK EI+ SIP  E+V+LYR+G + DL
Sbjct: 121 EKRMTELAAKDEPVVRRVLPRDEAVTYFKGLGEHYKAEIIASIPRNEDVSLYREGGFEDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG+++ F KLMKVAGAYWRGD    ML R+YGTAW ++ EL QYL+ LEE+E
Sbjct: 181 CRGPHVPSTGKLRHF-KLMKVAGAYWRGDHRNEMLQRVYGTAWTSKDELQQYLHMLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD 301
           KRDHRKL RE+DLFHI E   G +FWH KGW ++Q +  YMRR  + + Y+E+  PQ+LD
Sbjct: 240 KRDHRKLGRELDLFHIDEHAPGTVFWHPKGWMLWQEVEQYMRRVYRDNGYQEVKGPQILD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+++GHWD YR NMF       T  + R +ALKPMNCPGH+ +F  G+KSYR+LP+R
Sbjct: 300 KTLWEKTGHWDKYRENMFI------TESEKRDYALKPMNCPGHILIFKQGIKSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
             EFG+ +RNEP+G LHG+MRVRGFTQDD H+FCT++ + +E      L+  +Y+DFGF 
Sbjct: 354 FGEFGNCHRNEPTGGLHGIMRVRGFTQDDGHIFCTEDMIQSEVATFTTLLQRVYRDFGFT 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
           +I+ +LSTRPEKR+GS+  WD AE+ +   L     +         L GEGAFYGPK EY
Sbjct: 414 EILYRLSTRPEKRIGSEESWDRAESALAEGLRASGCT------FEYLPGEGAFYGPKIEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
           +LKDA+GR+WQCGTIQVD N+P R +A +V     +  P+++HRA+ GS+ERFIGI+IE 
Sbjct: 468 VLKDALGREWQCGTIQVDPNMPERLDAEFVGEDGARHRPIVLHRAIVGSLERFIGILIEQ 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHL----SIETDFRNETINYKIRE 597
           F G LP+WL+P+Q  V  IT +  +Y +EIA  L            TD RNE I YKIRE
Sbjct: 528 FAGALPVWLAPVQVAVLNITDAQADYCREIAAKLHKALPNQSLRAVTDLRNEKITYKIRE 587

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H+++K+P I++ GDKE +  ++ +R  G+     +S+   + ++ ++
Sbjct: 588 HALQKLPYILVVGDKEKAAGAVAVRARGNKDLGVMSIDAFVELIARD 634


>gi|262382112|ref|ZP_06075250.1| threonyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
 gi|298375301|ref|ZP_06985258.1| threonine--tRNA ligase [Bacteroides sp. 3_1_19]
 gi|262297289|gb|EEY85219.1| threonyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
 gi|298267801|gb|EFI09457.1| threonine--tRNA ligase [Bacteroides sp. 3_1_19]
          Length = 651

 Score =  645 bits (1663), Expect = 0.0,   Method: Composition-based stats.
 Identities = 256/649 (39%), Positives = 388/649 (59%), Gaps = 19/649 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEII 62
            IK+TFPD S++ +    T   +AESIS  LA++ +A ++NG+V DLS P+ +  +++++
Sbjct: 1   MIKITFPDNSVREYAKGTTAMQIAESISSRLAQEVLAASVNGEVWDLSRPINDDATVKLL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
             ED        HS AH+MAEA+Q ++P ++  IGP IE+GFYYD D  E      + A 
Sbjct: 61  KWEDEEGKHAFWHSSAHLMAEALQELYPGIKFGIGPAIENGFYYDVDPGEAVIKEGDFAA 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE KM E++A+     +Q ++   A ++F  + E YK E++  +     +T Y QG + D
Sbjct: 121 IEAKMLELVAKKEEIKRQDITKADAMKMFGDRGEEYKTELISEL-EDGTITTYTQGSFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ +T  +K   K++ VAGAYWRGD  R  L R+YG  +  ++ L +YL  LEE+
Sbjct: 180 LCRGPHLPNTSYLK-AVKILSVAGAYWRGDEKRKQLVRLYGITFPKKKMLDEYLTLLEEA 238

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           +KRDHRK+ +EMDLF  ++    G+  W  KG  +   L  ++RR + + +Y+E+  P +
Sbjct: 239 KKRDHRKIGKEMDLFMFSDTVGKGLPMWLPKGTALRLRLQEFLRRIQARYNYQEVMCPPI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            ++ L+  SGH+  Y  + F       T ++   + LKPMNCP H  ++ +  +SY++LP
Sbjct: 299 GNKLLYITSGHYAKYGKDSFQ---PIHTPEEGEEYFLKPMNCPHHCMIYKNSPRSYKDLP 355

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +RLAEFG+V R E SG LHGL RVR FTQDDAH+FC  +Q+  E L + ++I  ++K   
Sbjct: 356 LRLAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKQEFLNVMDIISIVFKTMN 415

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           FE    ++S R     EK +GSD  W+ AE  +    +      +  +   +  GE AFY
Sbjct: 416 FENFEAQISLRDKVNREKYIGSDENWEKAEQAIVEACE------EKGLKAKIEYGEAAFY 469

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDAIGR WQ GTIQVD+NLP RF   Y  + ++K  PVMIHRA FGS+ERF+
Sbjct: 470 GPKLDFMVKDAIGRRWQLGTIQVDYNLPERFQLEYTGADNQKHRPVMIHRAPFGSMERFV 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE+  G  PLWL+P Q  +  I+    +YA +IA  L +  +    D RNE I  KI
Sbjct: 530 AVLIEHTAGKFPLWLTPEQVCIMPISEKFNDYAWQIARELGNQEIRAIVDDRNEKIGRKI 589

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R++ +K+IP ++I G+KEA    + +R+ G      + +     +L  E
Sbjct: 590 RDNELKRIPYMLIVGEKEAENGEVSVRKQGEGDKGSMKIATFAALLNGE 638


>gi|282877699|ref|ZP_06286514.1| threonine--tRNA ligase [Prevotella buccalis ATCC 35310]
 gi|281300271|gb|EFA92625.1| threonine--tRNA ligase [Prevotella buccalis ATCC 35310]
          Length = 654

 Score =  645 bits (1663), Expect = 0.0,   Method: Composition-based stats.
 Identities = 253/650 (38%), Positives = 387/650 (59%), Gaps = 19/650 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            +K+TFPDGS++ +    TG  +AESIS +LA+  V+  +NG+  +L+ P+  + +I + 
Sbjct: 1   MVKITFPDGSVREYEKGVTGLQIAESISPALARNVVSCGVNGETVELNRPINEDATIALY 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD--FDKEQPFSSDELA 120
             ED        HS AH++AEA++ ++P +Q   GP IE+GF+YD       P S ++  
Sbjct: 61  RFEDEEGKHTFWHSSAHLLAEALKELYPGIQFGFGPAIENGFFYDVQTADGTPISENDFP 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IE+KM E+  ++ P +++ LS   A   F +  + YKVE +       N++ Y QG + 
Sbjct: 121 KIEQKMMELAKKNQPIVRRELSKADAVNEFTADGQTYKVEHIVEDLEDGNISTYTQGNFT 180

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ STG +K   K+  VAGA+WRGD+    L+RIYG  +  ++ L +YL  LEE
Sbjct: 181 DLCRGPHLMSTGLIK-AVKITSVAGAFWRGDAKNTQLTRIYGITFPKKKMLDEYLLMLEE 239

Query: 241 SEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++KRDHRK+ +EM+LF  +   G G+  W  KG ++   L   +R+  K   Y+E+ TP 
Sbjct: 240 AKKRDHRKIGKEMELFMFSDRVGKGMPIWLPKGTELRLRLQEMLRKIQKRFGYQEVITPH 299

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +  ++L+  SGH+  Y  + F       T +D   + LKPMNCP H  VF    +SY++L
Sbjct: 300 IGSKNLYVTSGHYAHYGKDSFQ---PIHTPEDDEEYMLKPMNCPHHCEVFACKPRSYKDL 356

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG+VYR E SG LHGL RVR FTQDDAH+FC  +Q+ NE L++ ++I +++  F
Sbjct: 357 PLRIAEFGTVYRYEKSGELHGLTRVRSFTQDDAHIFCRPDQVKNEFLRVMDIIQAVFTIF 416

Query: 419 GFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            F+    ++S R        +GSD +W ++E  +      I+   +  ++  V  GE AF
Sbjct: 417 NFDNFEAQISLRDPNDKEKYIGSDEVWAESEQAI------IEACKEKGLDAKVAYGEAAF 470

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK ++++KDAIGR WQ GTIQVD+NLP RF   Y    + K  PVM+HRA FGS+ERF
Sbjct: 471 YGPKLDFMVKDAIGRRWQLGTIQVDYNLPQRFKLEYTAEDNTKQTPVMVHRAPFGSLERF 530

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             ++IE+  G+ PLWL+P Q  +  I+     YAQ++        +    D RNE I  K
Sbjct: 531 TAVLIEHTAGHFPLWLTPEQVAILPISEKFNGYAQQVVKYFTEQDIRATIDDRNEKIGRK 590

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IR++ +K++P ++I G+KEA+E  + +R+ G      + + D    +  E
Sbjct: 591 IRDNELKRVPYMVIVGEKEAAEGLVSMRKQGGGEQATMKMEDFAARINNE 640


>gi|302024085|ref|ZP_07249296.1| threonyl-tRNA synthetase [Streptococcus suis 05HAS68]
 gi|330832440|ref|YP_004401265.1| threonyl-tRNA synthetase [Streptococcus suis ST3]
 gi|329306663|gb|AEB81079.1| threonyl-tRNA synthetase [Streptococcus suis ST3]
          Length = 649

 Score =  645 bits (1663), Expect = 0.0,   Method: Composition-based stats.
 Identities = 260/662 (39%), Positives = 412/662 (62%), Gaps = 27/662 (4%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            IK+TFPDG+++ +    T  ++AESIS+SLAKKA+A   NGK+ D +  +  +G++EI+
Sbjct: 1   MIKITFPDGAVREYQAGVTTFEIAESISKSLAKKALAGKFNGKLIDTTRAIEEDGTLEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQ 121
           TP+   +L ++RHS AH+ A+A + ++P++++ +GP I+DGFYYD D      S+++L +
Sbjct: 61  TPDHEDALDILRHSAAHLFAQAARRLFPDIKLGVGPAIQDGFYYDTDNAAGQISNEDLPR 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWF 180
           I+++M +I+  + P  ++ ++ E+A E+F+   + YK+E+++     E  +T+Y QGE+ 
Sbjct: 121 IQEEMMKIVKENFPSERREVTKEEAIEIFK--NDPYKLELIQEHSDDEGGLTIYTQGEYI 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV STG+++ F +L+ VAGAYWRG S  PM+ R+YGTAW  +++L  YL   EE
Sbjct: 179 DLCRGPHVPSTGRIQIF-ELLNVAGAYWRGKSENPMMQRVYGTAWFDKKDLKAYLQMREE 237

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           +++RDHRKL +E+DLF I+++   G+ FW   G  I +TL  Y+  +++   Y+ + TP 
Sbjct: 238 AKERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRTLERYITDKELTSGYQHVYTPP 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L++ SGHW+ Y  +MF          D   F L+PMNCP H+ V+ + ++SYREL
Sbjct: 298 LASVELYKTSGHWEHYSEDMFPTMDMG----DGEEFVLRPMNCPHHIQVYKNHVRSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           PVR+AE G ++R E SG+L GL RVR  T +D H+F T EQ+  E  K   LII +Y DF
Sbjct: 354 PVRIAELGMMHRYEKSGALTGLQRVREMTLNDGHIFVTPEQIQEEFKKALQLIIDVYADF 413

Query: 419 GFEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
                  +LS R      K   +D +W++A+ ++KG +D +       ++     GE AF
Sbjct: 414 NLNDYRFRLSYRDPEDKEKYYDNDEMWENAQRMLKGAMDEMG------VDYFEAEGEAAF 467

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K A+G +    TIQ+DF LP RF   Y+ +  E+  PVMIHR V  ++ERF
Sbjct: 468 YGPKLDIQVKTALGNEETLSTIQLDFLLPERFGLTYIGADGEEHRPVMIHRGVISTMERF 527

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
             I+IE +KG  P WL+P Q  +  I+  + ++YA ++A  L+   + +  D RNE + Y
Sbjct: 528 TAILIETYKGAFPTWLAPTQVTMIPISVEAHLDYAWKVAKELQDRGVRVHVDERNEKMQY 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI----PILTKESLPPD 649
           KIR+    KIP  +I GDKE  + ++ +RR+GS  TQ  S+ + +      + ++S P +
Sbjct: 588 KIRQSQTSKIPYQLIVGDKEMEDNAVNVRRYGSKATQTQSVAEFVDHILADIARKSRPAE 647

Query: 650 CQ 651
            +
Sbjct: 648 AE 649


>gi|304415438|ref|ZP_07396087.1| threonyl-tRNA synthetase [Candidatus Regiella insecticola LSR1]
 gi|304282702|gb|EFL91216.1| threonyl-tRNA synthetase [Candidatus Regiella insecticola LSR1]
          Length = 652

 Score =  644 bits (1662), Expect = 0.0,   Method: Composition-based stats.
 Identities = 298/657 (45%), Positives = 434/657 (66%), Gaps = 29/657 (4%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T  DGS + +    +  DVA  I+ SLAK  VA  INGK+ D  D +  +  +
Sbjct: 1   MPV---ITLTDGSQRCYDHAVSAFDVALDIAPSLAKACVAARINGKLADACDLIEADAQL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
             IT ++  +L +IRHSCAH++  A++ +WP+ ++AIGP+IE+GFYYD D + P + + L
Sbjct: 58  AFITMKENEALEIIRHSCAHLLGHAIKQLWPDTKMAIGPVIENGFYYDVDLQHPLTENHL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
           A +EK+M ++ + +   +K+ +S ++AR+ F ++ E YK  IL E+I   ++  LY   E
Sbjct: 118 ALLEKRMHDLASSNYDVIKKKVSWQEARDAFLARGEDYKTLILDENISRDDHPALYHHQE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KL K++GAYWRGDSN  ML RIYGTAW+ +++L  YL  +
Sbjct: 178 YIDMCRGPHVPNMRFCHHF-KLQKISGAYWRGDSNNKMLQRIYGTAWSDKKQLNAYLQKI 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF+ L S++R K+++  Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHHNGWTIFRELESFVRAKLQEYQYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW ++GHW++Y  NMF       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 297 LMMDRLLWAKTGHWENYAENMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNE SG+LHGLMRVR FTQDDAH+FCT++Q+  E      +I  +Y+ 
Sbjct: 351 LPLRMAEFGSCHRNESSGALHGLMRVRAFTQDDAHIFCTEQQVRAEVNNCIAMIYDMYRV 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI VKLSTRPEKR+GSD +W  AEN +   L      +++ I      GEGAFYGP
Sbjct: 411 FGFEKIEVKLSTRPEKRIGSDEIWTAAENDLAAAL------TENGIAFDWQPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF+LP R  A Y++ +S++  PVMIHRA+ GSIERFIGI
Sbjct: 465 KIEFTLHDCLDRAWQCGTVQLDFSLPGRLGASYIDENSQRTVPVMIHRAILGSIERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE + G  P WL+P+QA+V  IT   V+YA++I+  L+   + ++TD RNE +  KIRE
Sbjct: 525 LIEEYAGCFPTWLAPVQAVVINITDKHVDYAKKISTALQHAGIRVKTDLRNEKVGLKIRE 584

Query: 598 HSIKKIPIIIICGDKEASER-SIGIRRFG---------STTTQKVSLLDAIPILTKE 644
           H+++++P +++CGDKE      + +R  G         S       L   +  L  E
Sbjct: 585 HTLRRVPYMLVCGDKEVESGNKVSVRTLGTRTRSGAYHSKDLGSCDLDVILERLLTE 641


>gi|310821380|ref|YP_003953738.1| threonyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|309394452|gb|ADO71911.1| Threonyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
          Length = 642

 Score =  644 bits (1662), Expect = 0.0,   Method: Composition-based stats.
 Identities = 283/653 (43%), Positives = 408/653 (62%), Gaps = 16/653 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSD-VAESISRSLAKKAVAVAINGKVCDLSDPV-REGS 58
           M   I +T PDGS K      + +D V E I   LAK A+   +NG+  DL+ P+  +  
Sbjct: 1   MSDIITVTLPDGSQKQTARGTSIADFVREGIGAGLAKAALFARVNGQDMDLARPLTEDAK 60

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           ++I T +   +L +IRH  AH++A AVQ ++P  QV IGP  E+GFYYDF +E+PF+ ++
Sbjct: 61  LQIFTTKSTEALELIRHDAAHLVASAVQRLFPGTQVTIGPATEEGFYYDFFREKPFTPED 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKE--NVTLYRQ 176
           L +IE +    IAR+ PF+++ +S E+A  LFE K E +KVEI++ I AK    +TLY  
Sbjct: 121 LEKIEAEANAEIARNLPFVRKEVSMEEAVRLFEEKGEKFKVEIIQDIAAKGAKTLTLYSH 180

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           G+W D C GPH  STG+V    K++  +GAYWRGD   PML RIYGTA+  ++ L +YL 
Sbjct: 181 GDWVDFCLGPHGPSTGRVG-VIKILSSSGAYWRGDHRNPMLQRIYGTAFLDKKALQEYLT 239

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
            +EES+KRDHRKL +E+DLFH      G  FW  KG  ++QTL  +MRR   +  Y EI 
Sbjct: 240 RIEESKKRDHRKLGKELDLFHFHPFAPGSAFWSPKGTTLYQTLSQWMRRLTAETGYVEIK 299

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP + ++ LW+ SGHW  Y+ NMF V   +    D   F+LKPMNCP H   F     SY
Sbjct: 300 TPLMFNKGLWEASGHWGKYKENMFLVLDNESGEHD---FSLKPMNCPSHHLYFGFKRHSY 356

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           R+LP+RL     ++RNE +GSL GL RVR F QDDAH++CT++Q+ +E  +   L+  +Y
Sbjct: 357 RDLPLRLHTQDVLHRNEAAGSLGGLTRVRQFAQDDAHIYCTEDQIGDEVRRFVKLLDHVY 416

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
              G +    K STRPE+R+G DALWD AE+ ++GVL T+       +   V  GEGAFY
Sbjct: 417 NAVGLKYSA-KFSTRPEQRLGEDALWDRAESALEGVLKTLG------VPYEVKPGEGAFY 469

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++ + D+IGR WQ GTIQ+D+    RF+  Y+   + +  PV++HRA++GS ERFI
Sbjct: 470 GPKIDFDVSDSIGRKWQLGTIQLDYLAAQRFDLKYIGEDNAEHRPVVLHRAIYGSFERFI 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            I+IE+F G  P WL+PIQA++ T+    ++YA+++ + L++    +E D R +++N KI
Sbjct: 530 AILIEHFAGAFPAWLAPIQAVLVTVADRQLDYARKVRDQLRAKGFRVELDDRGQSLNAKI 589

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
           RE  I+K+P  ++ GD E     +  RR+G    + + L D   +L+KE+  P
Sbjct: 590 REWQIQKLPFTLVIGDNEVEAGGVAPRRYGGEDLKSMKLEDFEALLSKEAALP 642


>gi|301310685|ref|ZP_07216624.1| threonine--tRNA ligase [Bacteroides sp. 20_3]
 gi|300832259|gb|EFK62890.1| threonine--tRNA ligase [Bacteroides sp. 20_3]
          Length = 649

 Score =  644 bits (1662), Expect = 0.0,   Method: Composition-based stats.
 Identities = 256/649 (39%), Positives = 388/649 (59%), Gaps = 19/649 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEII 62
            IK+TFPD S++ +    T   +AESIS  LA++ +A ++NG+V DLS P+ +  +++++
Sbjct: 1   MIKITFPDNSVREYAKGTTAMQIAESISSRLAQEVLAASVNGEVWDLSRPINDDATVKLL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
             ED        HS AH+MAEA+Q ++P ++  IGP IE+GFYYD D  E      + A 
Sbjct: 61  KWEDEEGKHAFWHSSAHLMAEALQELYPGIKFGIGPAIENGFYYDVDPGEAVIKEGDFAA 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE KM E++A+     +Q ++   A ++F  + E YK E++  +     +T Y QG + D
Sbjct: 121 IEAKMLELVAKKEEIKRQDITKADAMKMFGDRGEEYKTELISEL-EDGTITTYTQGSFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ +T  +K   K++ VAGAYWRGD  R  L R+YG  +  ++ L +YL  LEE+
Sbjct: 180 LCRGPHLPNTSYLK-AVKILSVAGAYWRGDEKRKQLVRLYGITFPKKKMLDEYLTLLEEA 238

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           +KRDHRK+ +EMDLF  ++    G+  W  KG  +   L  ++RR + + +Y+E+  P +
Sbjct: 239 KKRDHRKIGKEMDLFMFSDTVGKGLPMWLPKGTALRLRLQEFLRRIQARYNYQEVMCPPI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            ++ L+  SGH+  Y  + F       T ++   + LKPMNCP H  ++ +  +SY++LP
Sbjct: 299 GNKLLYITSGHYAKYGKDSFQ---PIHTPEEGEEYFLKPMNCPHHCMIYKNSPRSYKDLP 355

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +RLAEFG+V R E SG LHGL RVR FTQDDAH+FC  +Q+  E L + ++I  ++K   
Sbjct: 356 LRLAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKQEFLNVMDIISIVFKTMN 415

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           FE    ++S R     EK +GSD  W+ AE  +    +      +  +   +  GE AFY
Sbjct: 416 FENFEAQISLRDKVNREKYIGSDENWEKAEQAIVEACE------EKGLKAKIEYGEAAFY 469

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDAIGR WQ GTIQVD+NLP RF   Y  + ++K  PVMIHRA FGS+ERF+
Sbjct: 470 GPKLDFMVKDAIGRRWQLGTIQVDYNLPERFQLEYTGADNQKHRPVMIHRAPFGSMERFV 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE+  G  PLWL+P Q  +  I+    +YA +IA  L +  +    D RNE I  KI
Sbjct: 530 AVLIEHTAGKFPLWLTPEQVCIMPISEKFNDYAWQIARELGNQEIRAIVDDRNEKIGRKI 589

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R++ +K+IP ++I G+KEA    + +R+ G      + +     +L  E
Sbjct: 590 RDNELKRIPYMLIVGEKEAENGEVSVRKQGEGDKGSMKIATFAALLNGE 638


>gi|312886253|ref|ZP_07745867.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Mucilaginibacter
           paludis DSM 18603]
 gi|311301278|gb|EFQ78333.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Mucilaginibacter
           paludis DSM 18603]
          Length = 641

 Score =  644 bits (1662), Expect = 0.0,   Method: Composition-based stats.
 Identities = 269/651 (41%), Positives = 409/651 (62%), Gaps = 19/651 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            I +T PDGS++ +    +   +A SIS  LA+  +A  +NG+V D S  +  +  ++++
Sbjct: 1   MINITLPDGSVRQYEQGTSSYQIALSISEGLARNVLAAEVNGEVWDASRQIETDAHVKLL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
           T  D +  A   HS AH+MAEA+++++P  +  IGP IE GFYYD D  ++ FSSDE  +
Sbjct: 61  TWNDVQGKATYWHSSAHLMAEALEALYPGTKFGIGPAIETGFYYDVDFGDREFSSDEFKK 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE K+ E+    S F+++ +S   A E F  K + YK+++++ +P   ++T Y QG + D
Sbjct: 121 IEDKIIELAKTKSDFVRKPVSKADAIEYFTEKDDEYKLDLIKDLP-DGSITFYTQGNFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ +TG +K   KLM VAGAYWRGD +R  L+RIY   +    ELT YL+ +EE+
Sbjct: 180 LCRGPHIPNTGFIK-AVKLMSVAGAYWRGDESRKQLTRIYAVTFPKASELTDYLHLIEEA 238

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           +KRDHRKL +E++LF  +E    G+  W  KG  + + L++++++ ++K  YE++ TP +
Sbjct: 239 KKRDHRKLGKELELFAFSEKVGMGLPLWLPKGTALRERLVNFLQKAQVKAGYEQVITPHI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             ++L+  SGH++ Y A+ F       T ++   F LKPMNCP H  ++    +SY++LP
Sbjct: 299 GHKNLYVTSGHYEKYGADSFQ---PIKTPQEGEEFFLKPMNCPHHCEIYKTKPRSYKDLP 355

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           VR AEFG+VYR E SG LHGL RVRGFTQDDAH+FC  +Q+  E  K+ +L++ ++   G
Sbjct: 356 VRFAEFGTVYRYEQSGELHGLTRVRGFTQDDAHLFCRPDQVKEEFKKVIDLVLYVFNALG 415

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           F+    ++S R  +     +G+D  W  AE  +      I+++ +  + T  + GE AFY
Sbjct: 416 FKDYTAQVSLRDPENKAKYIGTDENWAIAEAAI------IESAEEKGLPTVHVTGEAAFY 469

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDA+GR WQ GTIQVD+NLP RF   Y  S ++K  PVMIHRA FGS+ERFI
Sbjct: 470 GPKLDFMVKDALGRKWQLGTIQVDYNLPERFELEYTGSDNQKHRPVMIHRAPFGSMERFI 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE+  GN PLWLSP Q IV  I+    EYA+++++LLK   +    DFR+E I  KI
Sbjct: 530 AVLIEHCAGNFPLWLSPEQFIVLPISEKYEEYAKKLSDLLKDSDICGLIDFRDEKIGRKI 589

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           R+  +KKIP ++I G+KE +E  + +R+ G      +S+ +    + KE  
Sbjct: 590 RDAEVKKIPYMLIVGEKEEAEGMVSVRKHGEGDLGSMSIEEFTQKIKKEIT 640


>gi|229496081|ref|ZP_04389803.1| threonyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406]
 gi|229316977|gb|EEN82888.1| threonyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406]
          Length = 672

 Score =  644 bits (1662), Expect = 0.0,   Method: Composition-based stats.
 Identities = 265/650 (40%), Positives = 395/650 (60%), Gaps = 19/650 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
           + IK+T PDGS +      T   +AE IS  LA+  +A  ++GK+ DLS P+ ++ ++++
Sbjct: 22  TMIKITLPDGSQRECQEGVTPYQIAEEISTRLAQDVLAAEVDGKIVDLSTPLMQDANVKL 81

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELA 120
           +  ED        H+ AH+MAEA+Q+++P  Q  IGP IE+GFYYD D  +      +LA
Sbjct: 82  LKWEDDGGKHAYWHTSAHLMAEAIQALYPHAQFGIGPAIENGFYYDIDTGDTILKESDLA 141

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IE+KM E      P  +  +S ++A + F ++ + YKVE++  +     +T Y QG + 
Sbjct: 142 KIEEKMLEFAKEKQPLTRCSISKQEALKRFANEGQTYKVELINDL-EDGTITTYSQGSFT 200

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ +TG +K   KL+ VAGAYWRGD  R  L+RIYG  +  ++ L +YL  LEE
Sbjct: 201 DLCRGPHLPNTGYIK-AVKLLSVAGAYWRGDEKRKQLTRIYGITFPKKKMLDEYLAVLEE 259

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++KRDHRK+ +E++LF  ++    G+  W  +G ++   L  ++++  KD  Y+++ TP 
Sbjct: 260 AKKRDHRKIGKELELFAFSQTVGAGLPLWLPRGTRLRLRLEDFLKKIQKDFGYQQVMTPH 319

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           + +  L++ SGH+  Y A+ F       T ++   F LKPMNCP H  ++     SYR+L
Sbjct: 320 IGNIELYKTSGHYAKYGADSFR---PITTPQEGEEFMLKPMNCPHHCEIYRIKPHSYRDL 376

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           PVRLAEFG+VYR E SG LHGL RVRGFTQDDAH+FCT EQ+ +E LK+ ++I  I+K  
Sbjct: 377 PVRLAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCTPEQVKDEFLKVMDIIFIIFKAL 436

Query: 419 GFEKIMV----KLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            FE        +     EK +GSD  WD AE  +      I+   +  +   V  GE AF
Sbjct: 437 KFENFEAQISLRDKNNREKYIGSDENWDRAEQAI------IEACQEKGLPAVVEYGEAAF 490

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK ++++KDAIGR WQ GTIQVD+NLP RF+  Y    ++K  PVMIHRA FGS+ERF
Sbjct: 491 YGPKLDFMVKDAIGRRWQLGTIQVDYNLPERFDLEYTGEDNQKHRPVMIHRAPFGSMERF 550

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
           + ++IE+  G  PLWL+P Q +V  I  +  EYA ++ + L +H ++   D RNE I  K
Sbjct: 551 VAVLIEHTAGRFPLWLTPDQVVVLPIGENFNEYAYKVRDFLANHDITATVDDRNEKIGRK 610

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IR++ +K+IP ++I G +E+   ++ +R+ G      V L      + +E
Sbjct: 611 IRDNELKRIPYLLIVGAQESENETVSVRKQGEGDQGSVKLSTFAEKICQE 660


>gi|257865905|ref|ZP_05645558.1| threonyl-tRNA synthetase [Enterococcus casseliflavus EC30]
 gi|257872238|ref|ZP_05651891.1| threonyl-tRNA synthetase [Enterococcus casseliflavus EC10]
 gi|257799839|gb|EEV28891.1| threonyl-tRNA synthetase [Enterococcus casseliflavus EC30]
 gi|257806402|gb|EEV35224.1| threonyl-tRNA synthetase [Enterococcus casseliflavus EC10]
          Length = 646

 Score =  644 bits (1661), Expect = 0.0,   Method: Composition-based stats.
 Identities = 256/648 (39%), Positives = 401/648 (61%), Gaps = 23/648 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +TFPDG+ K F V  T  ++AESIS+SLAKKA+A  +NG++ DLS P+  + +IEI+TP+
Sbjct: 5   ITFPDGAKKEFAVGVTTKEIAESISKSLAKKALAGKVNGQLIDLSRPIEEDATIEIVTPD 64

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQIEK 124
              +L ++RHS AH+MA+A++ ++  +   +GP I+ GFYYD D  E P ++++L  IE 
Sbjct: 65  HEDALGLLRHSTAHLMAQAMRRLYTSIHFGVGPAIDSGFYYDTDNGENPITAEDLPAIEA 124

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
           +M +II  +    ++ L+ E+A  LF    + YKVE++  +P  E +T Y+QGE+ DLCR
Sbjct: 125 EMMKIIKENLAIERRVLTKEEALTLFAE--DPYKVELITELPDDETITAYQQGEFVDLCR 182

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV STG++ + +KL+ VAGAYWRG S+  M+ R+YGTA+  +++L +++   EE+++R
Sbjct: 183 GPHVPSTGRI-QVYKLLSVAGAYWRGSSDNQMMQRVYGTAFFDKKDLKEFIRLREEAKER 241

Query: 245 DHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQ 302
           DHRKL +E++LF ++ +   G+ FW  KG  I +T+  Y+  ++I   Y+ + TP + + 
Sbjct: 242 DHRKLGKELELFMLSPEVGAGLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIMANV 301

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            L++ SGHWD Y  +MF          D     L+PMNCP H+ V+ + + SYRELP+R+
Sbjct: 302 DLYKTSGHWDHYHEDMFPPMDMG----DGEMLVLRPMNCPHHMMVYKNDIHSYRELPIRI 357

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AE G ++R E SG+L GL RVR  T +D H F   +Q+  E  +  +L+I +Y+DF    
Sbjct: 358 AELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKEEFKRTLDLMIGVYEDFNITD 417

Query: 423 IMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
              +LS R  +        DA+W++A+ ++K  +D ++      ++     GE AFYGPK
Sbjct: 418 YRFRLSYRDPQNKDKYFDDDAMWENAQTMLKAAMDELE------LDYFEAEGEAAFYGPK 471

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK-CHPVMIHRAVFGSIERFIGI 537
            +  +K A+G +    TIQ+DF LP RF+  YV    E    PV+IHR +  ++ERF+  
Sbjct: 472 LDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENNHRPVVIHRGIVSTMERFVAY 531

Query: 538 MIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           + E +KG  P WL+PIQA +  ++  +  +YA EI   L++  L +E D RNE + YKIR
Sbjct: 532 LTEVYKGAFPTWLAPIQASIIPVSVEAHSDYAYEIKERLQAQGLRVEVDDRNEKMGYKIR 591

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
               +KIP  I+ GD+E ++ ++ IRR+GS  TQ   L   +  +  E
Sbjct: 592 ASQTQKIPYQIVVGDQEVNDATVNIRRYGSKETQVEELNLFVDAMAAE 639


>gi|218782046|ref|YP_002433364.1| threonyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
 gi|226701455|sp|B8FN26|SYT_DESAA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|218763430|gb|ACL05896.1| Threonyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
          Length = 636

 Score =  644 bits (1661), Expect = 0.0,   Method: Composition-based stats.
 Identities = 275/651 (42%), Positives = 413/651 (63%), Gaps = 22/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            I +T PDG I       +G DVA+ IS   A+  VAV ++GK+ DLS P+  + S+  I
Sbjct: 1   MINITLPDGKIVESDGPVSGEDVAKGISEGFARNCVAVEVDGKLTDLSTPIETDASVVFI 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D + L ++RHS AH+MAEA+ +++P+ ++ IGP+IEDGFYYD D   P S D+  +I
Sbjct: 61  TTKDEQGLDIMRHSAAHVMAEAILNLYPDAKLTIGPVIEDGFYYDIDMP-PISEDDFPKI 119

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E+++ +II    PF+++ LS  +A + ++    A+K E++  +     +++Y QG + DL
Sbjct: 120 EQEINKIIKAKKPFVRKTLSKAEALDFYK--DNAFKTELISEL-EDGTISIYEQGGFTDL 176

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +TG VK   KLMKV+GAYWRGDS RPML R+YGTA+  ++EL  YL+ LEE++
Sbjct: 177 CRGPHVPNTGLVKTL-KLMKVSGAYWRGDSERPMLQRLYGTAFFDKKELKSYLHLLEEAK 235

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD 301
           KRDHRKL   +DLF   E+ +G+ F+H +G +++  L++Y R + K   Y E  TP +L+
Sbjct: 236 KRDHRKLGTALDLFSFHEEAAGMPFFHARGMELWNALLAYWREEHKKAGYVETKTPIMLN 295

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW++SGHW++YR NM+     D        +A+KPMNCPG + ++     SY +LP+R
Sbjct: 296 KSLWERSGHWENYRENMYTSLIEDF------DYAIKPMNCPGGMLLYKTKHHSYNDLPIR 349

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
             E G V+R+E SG L GL RVR F QDDAH+F T+E + +E L +  L+  +Y  FG  
Sbjct: 350 AGEIGLVHRHELSGVLSGLFRVRAFHQDDAHIFMTEEMIEDEILGVLQLVERMYSTFGLG 409

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
             + +LSTRPEK +G+D  W+ A   ++  LD          +  +  G+GAFYGPK + 
Sbjct: 410 FHL-ELSTRPEKTIGTDEQWEKATEGLRAALDKSGR------DYKINEGDGAFYGPKIDI 462

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+GR WQCGTIQ+D NLP RF+  YV + +++  PVMIHR ++GSIERF+GI+IE+
Sbjct: 463 HIKDALGRTWQCGTIQLDMNLPERFDLTYVGADNQRHRPVMIHRVIYGSIERFLGILIEH 522

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  PLWLSP QA+V  +      YA+E+   L+   L +E D R E+IN K+R+  + 
Sbjct: 523 YAGKFPLWLSPCQAVVLAMNDDVAGYAKEVKARLEEAGLRMEIDLRAESINKKVRDAQLS 582

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK--ESLPPDC 650
           KIP+++  G KE + +++ +R         V++ + +  +    E+  PD 
Sbjct: 583 KIPLMLTVGGKEEAAQTLAVRTLDGKVKYGVTIDNFLDKVLPHIETRNPDL 633


>gi|220917084|ref|YP_002492388.1| threonyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
 gi|254783505|sp|B8J823|SYT_ANAD2 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|219954938|gb|ACL65322.1| threonyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 650

 Score =  644 bits (1661), Expect = 0.0,   Method: Composition-based stats.
 Identities = 271/657 (41%), Positives = 392/657 (59%), Gaps = 17/657 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAE-SISRSLAKKAVAVAINGKVCDLSDPVR-EGS 58
           M   +K+T PDGS K  P      D  +  I   LAK A    ++G+  DLS  +  +  
Sbjct: 1   MSDLVKVTLPDGSQKEAPRGTPVIDFVKGQIGPGLAKAAYFARLDGEPVDLSRAIERDAR 60

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           +EI+T  +P +L V RH  AH+MA  VQ ++P  QV IGP IEDGFYYDF +E PF+ ++
Sbjct: 61  LEIVTTRNPEALEVARHDAAHVMASVVQKLYPGTQVTIGPAIEDGFYYDFARETPFTPED 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKE--NVTLYRQ 176
           L +IEK   E I  D PF++  +S E A  LFE   E YKVEI++ I AK    +TLY+ 
Sbjct: 121 LERIEKATNEAIKADLPFVRSEISMEAALALFEGMGERYKVEIVKDIAAKGAKTLTLYKH 180

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           G+W D C GPH  STG++    KL+ VAGAYWRGD+   ML RIYGTA+  ++EL  +L 
Sbjct: 181 GDWVDFCLGPHGPSTGRIGVV-KLLNVAGAYWRGDAKNAMLQRIYGTAFFDKKELDAHLA 239

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEIN 295
            LEE +KRDHR+L  ++ LF   E   G  FW   G  ++  L   MRR  +K+ Y+E+ 
Sbjct: 240 KLEEVKKRDHRRLGPQLGLFTFHEFAPGAPFWLPAGTVLYNVLEDAMRRLVLKNGYQEVK 299

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTI----KDLRTFALKPMNCPGHVAVFNHG 351
           TP + ++ LW+ SGHW  YR NMF V  ++       +D  +F+LKPMNCP H  ++   
Sbjct: 300 TPLLFNKRLWETSGHWGKYRENMFLVVDSESDPALPLEDRCSFSLKPMNCPSHHLIYRMD 359

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI 411
            +SYRELPVR     +++RNE SGSL GL RVR F QDDAH++  +EQ+ +E L+I  L+
Sbjct: 360 KRSYRELPVRYFTTDALHRNEASGSLGGLTRVRQFEQDDAHIYLREEQVTDEVLRIFELM 419

Query: 412 ISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
             +Y  FG        STRPE+R+G DALWD AE +++  LD         +   +  G+
Sbjct: 420 KVVYGAFGLG-FEATFSTRPEQRIGDDALWDRAEALLRKSLDATG------LKWTLNAGD 472

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
           GAFYGPK + ++ D++GR WQ  TIQ+D+  P RF+  +V   +++  PV+IHRA++GS 
Sbjct: 473 GAFYGPKIDMLVTDSLGRKWQTCTIQLDYAAPERFDLTFVGEDNKEHRPVVIHRAIYGSF 532

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           ERF+ I++E++ G  P WL+P+QA V T++     +A+E    L++    +E D  ++ +
Sbjct: 533 ERFVAILVEHYAGAFPAWLAPVQARVVTVSDRFEAWAREAGEALQARGWRVEVDASSDKL 592

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
             KIR   + KIP  ++ G+KE   + +  RR G    + + L     ++ +E+  P
Sbjct: 593 GAKIRNAQLAKIPFTLVVGEKEVEAKGVSPRRHGGEDLKTMPLETFAELMAREATAP 649


>gi|23099609|ref|NP_693075.1| threonine-tRNA ligase [Oceanobacillus iheyensis HTE831]
 gi|73919811|sp|Q8EPF3|SYT_OCEIH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|22777839|dbj|BAC14110.1| threonine-tRNA ligase [Oceanobacillus iheyensis HTE831]
          Length = 646

 Score =  644 bits (1661), Expect = 0.0,   Method: Composition-based stats.
 Identities = 254/650 (39%), Positives = 405/650 (62%), Gaps = 20/650 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           +D+ + FPDGS K FPV  TG ++A SIS  L K+A+A+ ++G++ DL   +  G SIEI
Sbjct: 2   ADLSIIFPDGSEKQFPVGTTGEEIAASISPGLKKQALAIKLDGELVDLRRELSSGGSIEI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           IT ++   L V+RHS AH++A+A++ ++ +V++ +GP+IE+GFYYD D E   + ++L +
Sbjct: 62  ITYKNNEGLEVLRHSSAHLLAQAIKRLFNDVKLGVGPVIEEGFYYDIDMEHKLTPEDLPK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK+M+ II  +    +  +S  KA+E+F    +  K+E++++IP  E VT+Y QGE+FD
Sbjct: 122 IEKEMKRIIDENLEIKRVEVSRNKAQEMFSDIGDDLKLELIDAIPENEQVTIYEQGEFFD 181

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG HV ST ++K F KL+ ++GAYWRGDSN   L RIYGTA+  + +L ++L  LEE 
Sbjct: 182 LCRGIHVPSTSKIKAF-KLLSISGAYWRGDSNNKQLQRIYGTAFEKKGQLEEHLQILEER 240

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           ++RDHRKL +E+ +F +++    G+  W  KG  I + +  Y+   + +  Y  + TP +
Sbjct: 241 KERDHRKLGKELGIFTVSQKVGQGLPLWLPKGATIRRNVERYIVDLEERLGYSHVYTPVL 300

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +  L++ SGHWD Y+ +MF     D+         L+PMNCP H+ VF + L SYR LP
Sbjct: 301 GNVELYKTSGHWDHYQDDMFPTMEMDN-----EELVLRPMNCPHHMMVFKNQLWSYRNLP 355

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           VR+AE G+++R+E SG+L GL RVR  T +DAH+F   +Q+  E +++  L+  +YKDFG
Sbjct: 356 VRIAELGTMHRHEMSGALAGLQRVRAMTLNDAHIFARPDQLKEEFIRVVELVQHVYKDFG 415

Query: 420 FEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
            +    +LS R      K V +D +W+ A+ ++K  ++ +       +      GE AFY
Sbjct: 416 IDDYYFRLSYRDPEDKEKYVDNDEMWEKAQAMLKETMEDMN------LEYVEAEGEAAFY 469

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G+D    TIQ+DF+LP RF+  Y+     +  PV+IHR V  ++ERF+
Sbjct: 470 GPKLDVQVKTALGKDETLSTIQLDFHLPERFDLTYIGEDGNQHRPVVIHRGVVSTMERFV 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             +IE +KG  P WL+P+Q  +  ++  + ++YA++I   L+   + +E D R+E I YK
Sbjct: 530 AFLIEEYKGAFPTWLAPVQVKIIPVSLQAHLDYAKDIEEKLRYQGVRVELDERDEKIGYK 589

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IRE   +K+P  ++ GDKE    S+  RR+G   T+ +     + ++ +E
Sbjct: 590 IREAQTQKVPFALVLGDKEMESNSVNYRRYGEQDTETLEFDQFLNLIKEE 639


>gi|307298932|ref|ZP_07578734.1| threonyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306915357|gb|EFN45742.1| threonyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 648

 Score =  644 bits (1660), Expect = 0.0,   Method: Composition-based stats.
 Identities = 279/649 (42%), Positives = 406/649 (62%), Gaps = 23/649 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           I +  PDGSIK +    T +++A+ IS  LA++A    ++ ++ DL  P+  + S++++ 
Sbjct: 3   ISIKLPDGSIKEYESGITPAEIAKGISEGLARRAFGAIVDEELWDLERPIEKDASVKLVL 62

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPE--VQVAIGPIIEDGFYYDFD-KEQPFSSDELA 120
            +DP S    RH+ +HI+A+A+  ++ +  V++AIGP IE+GFYYD D  E   + ++L 
Sbjct: 63  DKDPESSRFFRHTMSHILAQAIMRLYGKEKVKLAIGPTIENGFYYDIDLGETRITEEDLP 122

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK---ENVTLYRQG 177
           +IE +M +II  D P  +  L   +A EL + + + YKV+++E +      E VT Y+QG
Sbjct: 123 KIESEMSKIIKEDLPVERFELPVSEAIELMKREDQPYKVQLIEDLVKDTGAEKVTFYKQG 182

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           E+ DLCRGPHV STG+VK F KL  V+GAYWRGD N  ML R+YGTA+  + +L  YL  
Sbjct: 183 EFVDLCRGPHVSSTGKVKYF-KLTSVSGAYWRGDENNKMLQRVYGTAFAKKSDLEDYLRM 241

Query: 238 LEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
           +EE++KRDHRKL   + LF I  +   G+  +  KG ++   L+ + R K  +  Y E++
Sbjct: 242 IEEAKKRDHRKLGPALGLFTINYEYAPGMPVFLPKGTEMLNQLLQFSREKHVEDGYREVS 301

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TPQ++   LW+ SGHWD YR NM+       T K+ + FA+KPMNCPGH+ V+     SY
Sbjct: 302 TPQIMSDALWRTSGHWDHYRDNMYF------TEKEDQQFAVKPMNCPGHIIVYKSSSVSY 355

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           R+LP++L EFG V+R E SG LHGL RVRGF QDDAH+FCT+EQ+  E + + + +  IY
Sbjct: 356 RDLPMKLFEFGKVHRYERSGVLHGLFRVRGFVQDDAHIFCTREQIQQEIMGVIDFVQKIY 415

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
             F FE    +LSTRPE  +G   LWD A   ++  L         ++   V  G+GAFY
Sbjct: 416 SPFNFEY-RAELSTRPEDYMGEVELWDIATKALEDSLLA------KKMEFKVNEGDGAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +Y +KD++GR+WQC TIQ+DF +P RF   YV   +E+  PVMIHRA+FGS+ERF+
Sbjct: 469 GPKIDYHIKDSLGREWQCATIQLDFMMPERFGIKYVGPDNEEYQPVMIHRAIFGSVERFM 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
           GI+IE+F G  P WL+P Q  V  I     EYA+ +A  LKS    +E D R ++ NYKI
Sbjct: 529 GILIEHFAGAFPAWLAPTQVSVIPIADRHAEYAESVAAELKSRGFRVEVDDRQKSTNYKI 588

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           RE  + K+P +II GD+E  + +I +R         ++L + +  L++E
Sbjct: 589 REAQLMKVPYMIIVGDREKEDGTISVRLRSEKDLGSIALQEFMDKLSQE 637


>gi|146328703|ref|YP_001209437.1| threonyl-tRNA synthetase [Dichelobacter nodosus VCS1703A]
 gi|166223338|sp|A5EVK6|SYT_DICNV RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|146232173|gb|ABQ13151.1| threonyl-tRNA synthetase [Dichelobacter nodosus VCS1703A]
          Length = 640

 Score =  644 bits (1660), Expect = 0.0,   Method: Composition-based stats.
 Identities = 292/645 (45%), Positives = 431/645 (66%), Gaps = 19/645 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS K+F    TG ++AESI  SLAK A+AV I  K+ DLSD +  +  +
Sbjct: 1   MP---TITLPDGSKKSFNAAITGQEIAESIGSSLAKAAIAVRIGEKLQDLSDTIACDADV 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L +IRHSCAH++  A++ +WP+ ++ IGP+IE+GFYYD + +  F+ ++L
Sbjct: 58  TIITDKDEAGLEIIRHSCAHLLGHALKQLWPQAKMVIGPVIENGFYYDIEADHRFTPEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-ENVTLYRQGE 178
           A +E++MQ++ A      K++    +ARE+F  ++E +K+ +++   A  + V LY   E
Sbjct: 118 AVLEERMQKLAATGYSVKKEWTPVARAREIFHERQEDFKIRLIDDFDADVKEVGLYYHQE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV   G++K F KL K++G+YWRGD+    L RIYG A+ +++EL  YL   
Sbjct: 178 YVDMCRGPHVPDMGKIKAF-KLTKLSGSYWRGDAQAEALQRIYGVAFRSKKELDDYLTQQ 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
            E+EKRDHRK+ + +DLFH+ E+  G++FWH KGW I++ + +YMR K++   Y+E+  P
Sbjct: 237 AEAEKRDHRKIGKALDLFHLQEEAPGMVFWHAKGWTIYREIENYMRTKLRKYGYQEVQGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           Q+LD+ LW++SGHWD +  NMF          D   FA+KPMNCPGHV +FN GLKSYRE
Sbjct: 297 QILDRSLWEKSGHWDKFGGNMFTC------CIDNHDFAVKPMNCPGHVQIFNQGLKSYRE 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R AEFG  +RNEPSG+LHG+MRVR F QDD H+FC + Q+  E  +   ++  +Y D
Sbjct: 351 LPIRYAEFGICHRNEPSGTLHGIMRVRRFVQDDGHIFCARNQVRVEIERTCRMVYEVYDD 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF+ + + LSTRPEKRVGSD +WD+AE  ++  L+         +   +  GEGAFYGP
Sbjct: 411 FGFKNVELALSTRPEKRVGSDEIWDEAERGLQEALEA------QNLAFRLQPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ LKD++GR WQCGT+Q+DF++P+R  A Y++ H EK  PVMIHRA+ GS+ERFIGI
Sbjct: 465 KIEFTLKDSLGRRWQCGTVQLDFSMPARLGAEYIDEHGEKQTPVMIHRAILGSLERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE + GN+P+WLSP+QA++  IT +  +Y Q +     +  +  E D RNE I+YKIRE
Sbjct: 525 LIEQYAGNMPVWLSPVQAMIMPITDTHADYVQNVMQKFIAAGIRAEIDLRNEKISYKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           H+++++P +++ GD+E    ++ +R         + +   I  + 
Sbjct: 585 HTLQRVPFLLVAGDREKQSNTLSVRTRDGKELGVMEIATIIEHIR 629


>gi|326336128|ref|ZP_08202300.1| threonine--tRNA ligase [Capnocytophaga sp. oral taxon 338 str.
           F0234]
 gi|325691637|gb|EGD33604.1| threonine--tRNA ligase [Capnocytophaga sp. oral taxon 338 str.
           F0234]
          Length = 649

 Score =  644 bits (1660), Expect = 0.0,   Method: Composition-based stats.
 Identities = 255/649 (39%), Positives = 389/649 (59%), Gaps = 20/649 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            IK+T PDGS+K +    T ++VA  IS + A+  ++ + NGK  +   P+  +GS+ + 
Sbjct: 1   MIKITLPDGSVKEYRKGVTPAEVAHDISDAFARNVISASFNGKTIETVTPLETDGSLVLY 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQ 121
           T E+P       HS AHI+A+A++ ++P +++ IGP I +GFYYD D      +  +   
Sbjct: 61  TWENPEGKKAFWHSSAHILAQALEELFPNIKLTIGPAIANGFYYDVDFNGNTITDKDFPA 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE KM EI      F  + +S  +A   ++ K E YK E++E++     +T      + D
Sbjct: 121 IEAKMLEIARGKYEFKMRPVSKAEALSYYKGKNE-YKTELIEAL-EDGTITFCDHSTFTD 178

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG H+ +TG VK   K++ +AGAYWRGD N P L+R+YG ++  Q++LT+YL  LEE+
Sbjct: 179 LCRGGHIPNTGFVK-AVKILSIAGAYWRGDENNPQLTRVYGISFPKQKDLTEYLTLLEEA 237

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           +KRDHRKL +E++LF  +     G+  W  KG  + + L +++R+ + +  YE++ TP +
Sbjct: 238 KKRDHRKLGKELELFTFSNKVGQGLPLWLPKGAALRERLEAFLRKAQKQAGYEQVVTPHI 297

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             ++L+  SGHW+ Y  + F       T  +   + LKPMNCP H  ++N    SY++LP
Sbjct: 298 GHKNLYVTSGHWEKYGKDSFQ---PIATPNEGEEYLLKPMNCPHHCEIYNSHPWSYKDLP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
            R AEFG+VYR E SG LHGL RVR FTQDDAH+FCT EQ+  E   + +L++ ++   G
Sbjct: 355 KRFAEFGTVYRYEQSGELHGLTRVRCFTQDDAHIFCTPEQLDAEFKHVIDLVLYVFGSLG 414

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           FE    ++S R  +     +GSD  W  AE+ +      I  + +  +   +  GE AFY
Sbjct: 415 FENFTAQVSLRDPENLSKYIGSDENWAKAESAI------INAAKEKNLTYVIETGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDA+GR WQ GTIQVD+NLP RF+ +Y  + +E   PVMIHRA FGS+ERF+
Sbjct: 469 GPKLDFMVKDALGRSWQLGTIQVDYNLPERFDLWYKGADNEMHRPVMIHRAPFGSMERFV 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            I++E+  GNLPLWL P Q  + +++     YA ++ANLL+   L    D RNETI  KI
Sbjct: 529 AILLEHTAGNLPLWLVPEQVNILSVSEKYEGYAYKVANLLQEADLRPHVDNRNETIGKKI 588

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           RE   +K P +II G++E    ++ +R+ G      + + D I ++ +E
Sbjct: 589 REAETQKYPYMIIVGEEEEKNGTLSVRKHGGADLGTMKIADFITLIQEE 637


>gi|332830447|gb|EGK03075.1| threonyl-tRNA synthetase [Dysgonomonas gadei ATCC BAA-286]
          Length = 650

 Score =  643 bits (1659), Expect = 0.0,   Method: Composition-based stats.
 Identities = 264/649 (40%), Positives = 397/649 (61%), Gaps = 19/649 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+TFPDGS++ F    T   +AESIS  LA+  +A  +NG+V DL+ P+  + +IE++
Sbjct: 1   MIKITFPDGSVREFAKGTTSMQIAESISSRLAQDVLAAKVNGQVWDLTRPIDEDATIELL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
             ED        HS AH+MAEA+Q ++P  +  IGP IE+GFYYD D  + P    + A+
Sbjct: 61  KWEDEDGKHAYWHSSAHLMAEAIQILYPHAKFGIGPAIENGFYYDIDFGDTPVKDADFAK 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE KM E+IA      +Q ++   A ++F+++ E YKVE++  +     +T Y QG + D
Sbjct: 121 IEAKMMELIANKEEIKRQNITKSDAIKMFDARHENYKVELINDL-EDGTITTYTQGVFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ +T  +K   K++  AGAYWRGD  R  L+R+YG  +  ++ L +YL  LEE+
Sbjct: 180 LCRGPHLPNTSYIK-AVKILSAAGAYWRGDEKRKQLTRLYGITFPKKKMLDEYLIMLEEA 238

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           +KRDHRK+ +E++LF  +E+   G+  W  +G ++   L  ++++ + K DY+++ TP +
Sbjct: 239 KKRDHRKIGKELELFAFSENVGKGLPLWLPRGTQLRLKLEDFLKKIQRKFDYQQVMTPHI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             + L+  SGH++ Y  + F       T ++   F LKPMNCP H  ++    +SY++LP
Sbjct: 299 GSKILYVTSGHYEKYGKDSFQ---PIHTPEEGEEFLLKPMNCPHHCEIYKIIPRSYKDLP 355

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +RLAEFG+VYR E SG LHGL RVRGFTQDDAH+FCT EQ+  E LK+ +++  I+K   
Sbjct: 356 LRLAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCTPEQLKAEFLKVMDIVFIIFKALD 415

Query: 420 FEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           FE    ++S R      K +GSD  W+ AE  +    +      +  +   V LGE AFY
Sbjct: 416 FENFEAQISLRDPENREKYIGSDENWEKAERAIIEACE------EKGLPAKVELGEAAFY 469

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDA+GR WQ GTIQVD+NLP RF   Y  + ++K  PVMIHRA FGS+ERFI
Sbjct: 470 GPKLDFMVKDALGRRWQLGTIQVDYNLPERFELEYTGADNQKHRPVMIHRAPFGSMERFI 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE+  G  PLWL+P Q ++  I+    +YA  + +  K   +S + D RNE I  KI
Sbjct: 530 AVLIEHTAGKFPLWLAPDQVVILPISEKFNDYAHRVNSYFKQQGISSQVDDRNEKIGRKI 589

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R++ +K+IP ++I G+KEA    + +R+ G      +   +    L +E
Sbjct: 590 RDNELKRIPYLLIVGEKEAETEEVSVRKQGEGDKGSMKFTNFAAQLNEE 638


>gi|257465911|ref|ZP_05630222.1| threonyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
 gi|315917067|ref|ZP_07913307.1| threonine-tRNA ligase [Fusobacterium gonidiaformans ATCC 25563]
 gi|313690942|gb|EFS27777.1| threonine-tRNA ligase [Fusobacterium gonidiaformans ATCC 25563]
          Length = 637

 Score =  643 bits (1659), Expect = 0.0,   Method: Composition-based stats.
 Identities = 296/644 (45%), Positives = 417/644 (64%), Gaps = 16/644 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K+ F DG ++ F        VA+SIS SLAKKAVA  I+G++ D+S  +  +  +E I 
Sbjct: 1   MKIEFLDGKVQEFHEACNMFVVAKSISNSLAKKAVAAKIDGELYDMSYVLDHDAKVEFIM 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           PE    + VIRHS AH+MA+AV  ++P  +V IGP IE+GFYYDFD ++ F+ ++L +IE
Sbjct: 61  PESEEGVEVIRHSAAHLMAQAVIRLFPGTKVTIGPAIENGFYYDFDPKEQFTEEDLTRIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           ++M+++   D    +  +S E+A E FE   E YKVEI++ I   E ++ YRQG++ DLC
Sbjct: 121 EEMKKLSKEDIKVERFMMSREEAIEYFEKLGEHYKVEIIKEIAKGEQLSFYRQGDFVDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV STG +K   KL  VAGAYWRGDS   ML RIYG A+ T+++L  +L  +EE+EK
Sbjct: 181 RGPHVPSTGHIK-AVKLKSVAGAYWRGDSKNKMLQRIYGYAFATEKDLKDFLKLMEEAEK 239

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQ 302
           RDHRKL +E++LF ++E G G  F+  KG  +  TLI   R    K  Y +I+TP +L++
Sbjct: 240 RDHRKLGKELELFFLSEYGPGFPFFLPKGMVLRNTLIDLWRAEHEKAGYVQIDTPIMLNR 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW +YR NM+       +  D   FA+KPMNCPG V  F +   SYR+LP R+
Sbjct: 300 ELWEISGHWFNYRENMYT------SSIDDVDFAIKPMNCPGGVLAFKYQQHSYRDLPARV 353

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AE G V+R+E SG+LHGL RVR FTQDD+H+F T+EQ+ +E + + NLI   Y      +
Sbjct: 354 AELGKVHRHEFSGALHGLFRVRAFTQDDSHIFMTEEQIESEIIGVVNLIDKFYSKLFGFQ 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             ++LSTRPEK +G+D +W+ AE  + G L+ +           +  G+GAFYGPK ++ 
Sbjct: 414 YSIELSTRPEKSIGTDEIWEKAETALAGALNHLGR------EFKINEGDGAFYGPKLDFK 467

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDAIGR WQCGTIQ+DFNLP RF+  Y+    EK  PVMIHR ++GSIERFIGI+IE++
Sbjct: 468 IKDAIGRTWQCGTIQLDFNLPERFDVTYIGEDGEKHRPVMIHRVIYGSIERFIGILIEHY 527

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH-SIK 601
            G  P+WL+P+Q  V TI      YA+E+   LK+  +  E D R+E+I YKIRE     
Sbjct: 528 AGAFPMWLAPVQVKVLTINDECAPYAKEVVAQLKAQGIRAELDDRSESIGYKIREANGRY 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           KIP+ +I G  E  +R + +RRFGS   + + L   + ++ +E+
Sbjct: 588 KIPMQVIIGKNEIEKREVNVRRFGSQAQESMELDAFLAMVKEEA 631


>gi|290969075|ref|ZP_06560610.1| threonine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
 gi|290781031|gb|EFD93624.1| threonine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
          Length = 635

 Score =  643 bits (1659), Expect = 0.0,   Method: Composition-based stats.
 Identities = 273/640 (42%), Positives = 401/640 (62%), Gaps = 16/640 (2%)

Query: 6   KLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITP 64
           ++   DGS K F    T  +  + +S SLAKK +A  +NGKV DL +PV +G+ +E +T 
Sbjct: 3   EVQLKDGSKKTFADGITLREAVKQLSNSLAKKVLAARVNGKVTDLCEPVADGTTVEFLTF 62

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           +       +RH+ +H+MA+A+  ++P+V+ AIGP IE+GFYYD D E  F+ ++ A IEK
Sbjct: 63  DAQEGKDTLRHTASHVMAQAISHLYPDVKFAIGPAIENGFYYDLDTEHRFTQEDFAAIEK 122

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
           +M  ++  + P  K  +S  +A + F  K + YKVE++E +PA   ++LY+QG++ DLC 
Sbjct: 123 EMAALVKANEPIEKMVVSRAEALQFFRDKHQDYKVELIEDLPADAVISLYKQGDFVDLCA 182

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPH  STG+VK F KL+ VAGAYWRGD    ML RIYGTA+  + +L  Y+    E+EKR
Sbjct: 183 GPHCESTGRVKAF-KLLTVAGAYWRGDEKNKMLQRIYGTAFEKKADLDAYVTMRAEAEKR 241

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQH 303
           DHRKL +++DLF   E+G G  F+H KG  +  +L+ + R    + DY+EI TP +L++ 
Sbjct: 242 DHRKLGKQLDLFSFHEEGPGFPFFHAKGMVLRNSLLKFWRELHAEADYDEIMTPTILNRQ 301

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+QSGHWD YR NM+       T  D + +A+KPMNCPG + V+   + SYR+ P+R A
Sbjct: 302 LWEQSGHWDHYRDNMYF------TTIDEQPYAIKPMNCPGGILVYKSSVHSYRDFPIRAA 355

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           E G V+R+E  G+LHGL RVR FTQDDAH+F    QM +E   + +L    YK FG E  
Sbjct: 356 ELGLVHRHELHGALHGLFRVRCFTQDDAHIFMLPSQMKDEISGVMDLFDKAYKQFGLEYH 415

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            V+LSTRPE  +GSD +W+ A   +  V++      + ++   +  G+GAFYGPK ++ L
Sbjct: 416 -VELSTRPEDSMGSDEIWESATKTLHEVIE------EKQVPYVINEGDGAFYGPKLDFHL 468

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           KD +GR WQCGTIQ+D  +P RF+  Y+    +K  PVM+HRA FGSIERF+GI+ EN+ 
Sbjct: 469 KDCLGRTWQCGTIQLDMLMPERFDVTYIGEDGQKHRPVMVHRACFGSIERFLGIITENYA 528

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P+WL+P+Q     I+   + YA++ A   K   L +E D  +E I YKIR+  ++K+
Sbjct: 529 GAFPVWLAPVQIKFLPISDKQLAYAEDTARRFKKAGLRVEVDTSSEKIGYKIRKAQMEKV 588

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           P + I GDKE +  +I +R          +  + + ++ +
Sbjct: 589 PYMAIVGDKEMAAGTISVRERTQGDIGVKAAEEVLHMIKQ 628


>gi|312864463|ref|ZP_07724694.1| threonine--tRNA ligase [Streptococcus downei F0415]
 gi|311099590|gb|EFQ57803.1| threonine--tRNA ligase [Streptococcus downei F0415]
          Length = 651

 Score =  643 bits (1658), Expect = 0.0,   Method: Composition-based stats.
 Identities = 258/651 (39%), Positives = 409/651 (62%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            +K+TFPDG+++ F    T  ++A++IS SLAKKA+A  +N ++ D + P+ ++GS+EI+
Sbjct: 1   MVKITFPDGAVREFESGITTFEIAQTISNSLAKKALAGKLNDRLIDTTRPITQDGSLEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQ 121
           TP+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D      S+++L +
Sbjct: 61  TPDHEDALGILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNGAGQISNEDLPK 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-ENVTLYRQGEWF 180
           IE++M++I+  + P +++ ++ ++ARE+F+   + YK+E++E        +T+YRQGE+ 
Sbjct: 121 IEEEMKKIVKENFPSIREEVTKDQAREIFK--NDPYKLELIEEHSEDAGGLTIYRQGEYV 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ RIYGTAW  +++L  YL  LEE
Sbjct: 179 DLCRGPHVPSTGRIQVFHLL-NVAGAYWRGNSDNAMMQRIYGTAWFDKKDLKAYLKRLEE 237

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           +++RDHRKL +E+DLF I+++   G+ FW   G  I +T+  Y+  R++   Y+ + TP 
Sbjct: 238 AKERDHRKLGKELDLFMISQEVGQGLPFWLPDGATIRRTIERYITDREVASGYQHVYTPP 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L++ SGHWD YR +MF          D   F L+PMNCP H+ V+ + + SYREL
Sbjct: 298 IASVDLYKTSGHWDHYREDMFPTMDMG----DGEAFVLRPMNCPHHIQVYKNHVHSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  +   LII +Y+DF
Sbjct: 354 PIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQVEDEFKQTLQLIIDVYEDF 413

Query: 419 GFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
                  +LS R      K    D +W+ ++ ++K  +D +       ++     GE AF
Sbjct: 414 NITDYSFRLSYRDPADTHKYFDDDEMWEKSQRMLKAAMDDMG------LDYYEAEGEAAF 467

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K A+G D    TIQ+DF LP RF   Y+ +  E+  PVMIHR +  ++ERF
Sbjct: 468 YGPKLDIQVKTALGNDETLSTIQLDFLLPERFELTYIGADGEEHRPVMIHRGIVSTMERF 527

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINY 593
              +IE +KG  P WL+P Q  V  +++    +YA E+A  L++H + ++ D RNE + Y
Sbjct: 528 TAYLIETYKGAFPTWLAPHQVTVIPVSNEAHADYAWEVAKELRNHGVRVDVDERNEKMQY 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR+    KIP  +I GDKE +++S+ +RR+GS  T   SL + +  +  +
Sbjct: 588 KIRQSQTHKIPYQLIVGDKEMADKSVNVRRYGSKQTHTESLNEFVDNIQAD 638


>gi|319938817|ref|ZP_08013181.1| threonyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
 gi|319811867|gb|EFW08133.1| threonyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
          Length = 650

 Score =  643 bits (1658), Expect = 0.0,   Method: Composition-based stats.
 Identities = 258/651 (39%), Positives = 411/651 (63%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+TFPDG++  +   +T  D+A+SIS SLAKKA+A   NGK+ D + P+  +GSIEI+
Sbjct: 1   MIKITFPDGAVHEYESGSTTFDIAQSISNSLAKKALAGKFNGKLIDTTRPITEDGSIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQ 121
           TP+   +L ++RHS AH+ A+A + ++P++ + +GP I+DGFYYD D      S+++L +
Sbjct: 61  TPDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIQDGFYYDTDNTAGQISNEDLPR 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWF 180
           IE++M++I+  + P +++ ++ ++ARE+F+   + YK+E++E     E  +T+YRQGE+ 
Sbjct: 121 IEEEMKKIVKENFPSIREEVTKDQAREIFK--NDPYKLELIEEHSEDEGGLTIYRQGEYV 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ RIYGTAW  +++L  YL   EE
Sbjct: 179 DLCRGPHVPSTGRIQIFHLL-NVAGAYWRGNSDNAMMQRIYGTAWFDKKDLKNYLQMREE 237

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           +++RDHRKL +E+DLF I+ +   G+ FW   G  I + +  Y+  R++ D Y+ + TP 
Sbjct: 238 AKERDHRKLGKELDLFMISPEVGQGLPFWLPDGATIRRIVERYITDREVNDGYQHVYTPP 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L++ SGHW+ Y+ +MF          D   F L+PMNCP H+ V+ + + SYREL
Sbjct: 298 LASVELYKTSGHWEHYQEDMFPPMDMG----DGEQFVLRPMNCPHHIEVYKNHVHSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  T +D+H+F   EQ+  E   + +L+I +YKDF
Sbjct: 354 PIRIAELGMMHRFEKSGALSGLQRVREMTLNDSHLFVMPEQIQEEFKHVLDLMIDVYKDF 413

Query: 419 GFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
                  +LS R      K   +D +W++A+ ++KG +D +       ++     GE AF
Sbjct: 414 NITDYRFRLSYRDPNDKHKYFDNDEMWENAQRMLKGAMDDLG------LDYFEAEGEAAF 467

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K A+G +    TIQ+DF LP RF+  YV +  E+  PVMIHR +  ++ERF
Sbjct: 468 YGPKLDVQVKTALGNEETLSTIQLDFLLPERFDLHYVGADGEEHRPVMIHRGIVSTMERF 527

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINY 593
           I  +IE +KG  P WL+P Q  V  I++    +YA ++A  L++  + ++ D RNE + Y
Sbjct: 528 IAYLIETYKGAFPTWLAPHQVTVIPISNEAHADYAWKVAKELRNRGVRVDVDERNEKMQY 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR+    K+P  +I GDKE ++ ++ +RR+G   T   ++ + +  +  +
Sbjct: 588 KIRQSQTHKVPYQLIVGDKEQADGTVNVRRYGQKQTHTETIAEFVNHILAD 638


>gi|302063985|ref|ZP_07255526.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. tomato K40]
          Length = 590

 Score =  643 bits (1658), Expect = 0.0,   Method: Composition-based stats.
 Identities = 296/606 (48%), Positives = 419/606 (69%), Gaps = 18/606 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS ++F    + +DVA SI   LAK  VA  ++GK+ D  D +  + S+
Sbjct: 1   MP---TITLPDGSQRSFDHAVSVADVALSIGAGLAKATVAGKVDGKLVDACDLIENDASL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           +IITP+D   L +IRHSCAH++  AV+ ++P  ++ IGP+I+DGFYYD   E+PF+ D+L
Sbjct: 58  QIITPKDAEGLEIIRHSCAHLVGHAVKQLYPTAKMVIGPVIDDGFYYDIAYERPFTPDDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A IE++MQ++I +D   +K+     +  E+F ++ E YK+ ++E +P ++ + LY   E+
Sbjct: 118 AAIEQRMQQLIEKDYDVIKKVTPRAEVIEVFTARHEDYKLRLVEGMPDEQAMGLYYHEEY 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            D+CRGPHV +T  +K F KL K++GAYWRGD+    L R+YGTAW  +++L  Y+  +E
Sbjct: 178 VDMCRGPHVPNTRFLKSF-KLTKLSGAYWRGDAKNEQLQRVYGTAWADKKQLAAYIQRIE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+EKRDHRK+ + + LFH  E+  G++FWH +GW ++Q L  YMR+ + ++ Y EI TPQ
Sbjct: 237 EAEKRDHRKIGKRLGLFHTQEEAPGMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHW +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYREL
Sbjct: 297 VVDRSLWEKSGHWANYADNMFT------TQSESRDYAIKPMNCPCHVQVFNQGLKSYREL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFG+ +RNEPSG+LHG+MRVRGFTQDDAH+FCT++QM  E      L + +Y DF
Sbjct: 351 PLRLAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEDQMQAESAAFIKLTLDVYADF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+ I +KLSTRPEKRVGSD LWD AE+ +   LD+        +   +  GEGAFYGPK
Sbjct: 411 GFKDIELKLSTRPEKRVGSDELWDRAESALASALDSAG------LPYDLQPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD +GR WQCGT+Q+DFNLP R +A YV+  + + +PVM+HRA+ GS ERFIGI+
Sbjct: 465 IEFSLKDCLGRVWQCGTLQLDFNLPIRLSAEYVSEDNSRKNPVMLHRAILGSFERFIGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+++G  P WL+P QA++  IT    ++A E+   L       ++D RNE I +KIREH
Sbjct: 525 IEHYEGAFPAWLAPTQAVIMNITDKQADFALEVEKTLAESGFRAKSDLRNEKIGFKIREH 584

Query: 599 SIKKIP 604
           ++ K+P
Sbjct: 585 TLLKVP 590


>gi|297588366|ref|ZP_06947009.1| threonine--tRNA ligase [Finegoldia magna ATCC 53516]
 gi|297573739|gb|EFH92460.1| threonine--tRNA ligase [Finegoldia magna ATCC 53516]
          Length = 634

 Score =  643 bits (1658), Expect = 0.0,   Method: Composition-based stats.
 Identities = 263/641 (41%), Positives = 390/641 (60%), Gaps = 16/641 (2%)

Query: 6   KLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITP 64
           ++   DGS+K F    +  DV +SIS  LA+  V   ++GK+  L + ++ +  ++ +  
Sbjct: 3   EVKLKDGSVKEFDEEISLLDVCKSISEGLARDCVGAVVDGKIMGLMETIKSDCEVQFVKF 62

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           +D     V  H+ +H+MA A+Q ++P  + AIGP I+ GFYYD D +  F  ++L +IE 
Sbjct: 63  DDEEGKQVFWHTSSHLMAYAIQRLYPNTKFAIGPSIDSGFYYDLDTDHKFVPEDLEKIEA 122

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
           +M++I+  +   ++  +S E+A E F+ + + YKV+++E++     +TLY  G++ DLCR
Sbjct: 123 EMKKIVKENPKLVRVEISREEALERFKKEGQDYKVDLIENLDEDATITLYEMGDFVDLCR 182

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPH+     +K F KL+ +AGAYWRGD N  ML RIYG ++  ++ L +YL  +EE++KR
Sbjct: 183 GPHLLEVKNIKAF-KLLSIAGAYWRGDENNKMLQRIYGISFPKKKLLDEYLERMEEAKKR 241

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQH 303
           DHRK+ +EM LF I E+G G  F+H  G  +   L  +++ ++    Y +I TP +L++ 
Sbjct: 242 DHRKIGKEMGLFSIQEEGPGFPFFHPNGMVVLNELEKFLKEQLLDRGYGQIKTPLILNED 301

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW QSGHWD Y+ NM+  +       D   +A+KPMNCPG + V+   L SYRELP+++A
Sbjct: 302 LWHQSGHWDHYKENMYFTQI------DGDDYAIKPMNCPGSILVYKDELHSYRELPIKVA 355

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           E G V+R+E SG+LHGL RVR F QDDAHVFC  EQ+  E  KI +    IY  FGF+  
Sbjct: 356 ELGQVHRHELSGALHGLFRVRTFVQDDAHVFCLPEQIEEEVTKIIDFCDYIYSKFGFKYE 415

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            V+LSTRPE  +GSD  WD A N +K  L+         +   +  G+GAFYGPK ++ L
Sbjct: 416 -VELSTRPEDSMGSDEDWDLAINSLKSALEH------KGLEYKINEGDGAFYGPKIDFHL 468

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +DAIGR WQCGTIQ+DF +P RF+  Y+ S   K  P MIHRA+ GS ERF+GI+IE++ 
Sbjct: 469 EDAIGRTWQCGTIQLDFQMPERFDMTYIASDGSKKRPAMIHRAILGSEERFMGILIEHYA 528

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  PLWLSPIQ  +  I+    +YA E+   +K+  L ++ D R+E I  KIRE  +KK+
Sbjct: 529 GKFPLWLSPIQVEILPISDKFNDYAYELQQKMKARGLRVKVDDRSEKIGLKIRESQLKKV 588

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
              +I G  E     + +R+         +  + I  L  E
Sbjct: 589 NYSLIIGQNEIDNNEVSVRKRDLGDVGSKNTDEFIDELVDE 629


>gi|70726243|ref|YP_253157.1| threonyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
 gi|68446967|dbj|BAE04551.1| threonyl-tRNA synthetase 1 [Staphylococcus haemolyticus JCSC1435]
          Length = 645

 Score =  643 bits (1658), Expect = 0.0,   Method: Composition-based stats.
 Identities = 259/650 (39%), Positives = 400/650 (61%), Gaps = 21/650 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
             I + FPDG+ K F    T  ++A+SIS  L KKAVA     ++ DL+ P+  +GSIEI
Sbjct: 2   DQINVQFPDGNSKAFDKGITTEEIAQSISPGLRKKAVAGKFKNQMVDLTRPLEEDGSIEI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +TP    +L V+RHS AH+MA+A++ ++ +V+  +GP+I+ GFYYDFD ++  SSD+  +
Sbjct: 62  VTPGSDEALEVLRHSTAHLMAQALKRLYGDVKFGVGPVIDGGFYYDFDMDEKVSSDDFEK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK M++I+  +    ++ +S E+A+  F+   + YK+E++++IP  E+VTLY QGE+ D
Sbjct: 122 IEKTMKQIVDENHKIERKVVSREEAKSFFK--DDPYKLELIDAIPEDESVTLYSQGEFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG HV ST ++K+F KL+  AGAYWRGDSN  ML RIYGTA+  +++L  +L  LEE 
Sbjct: 180 LCRGVHVPSTSKIKEF-KLLSTAGAYWRGDSNNKMLQRIYGTAFFDKKDLKAHLEMLEER 238

Query: 242 EKRDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
            +RDHR++ ++++LF +    G+G+  W   G  I + +  Y+  +++   Y+ + TP +
Sbjct: 239 RERDHRRIGKDLELFTNNQLVGAGLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVL 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +  L++ SGHWD YR +MF     D+T        L+PMNCP H+ V+N+   SYRELP
Sbjct: 299 ANVELYKTSGHWDHYRDDMFPPMKLDET----EEMVLRPMNCPHHMMVYNNRPHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G+++R E SG++ GL RVRG T +D+H+F   +Q+ +E  ++ N+I  +Y DFG
Sbjct: 355 IRIAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKDEFKRVVNMIQEVYSDFG 414

Query: 420 FEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           FE    +LS R      K +  D +W+ AE ++K  +D +       +     +GE AFY
Sbjct: 415 FEDYTFRLSYRDPEDKEKYMDDDEMWNKAETMLKEAVDEMG------LPYVEAIGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G++    T Q+DF LP RF   Y+ S  E   PV+IHR V  ++ERF+
Sbjct: 469 GPKLDVQVKTAMGKEETLSTAQIDFLLPERFELTYIGSDGENHRPVVIHRGVVSTMERFV 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             + E  KG  P WL+P Q  +  +      +YA+ + + LKS  + +E D RNE + YK
Sbjct: 529 AFLTEETKGAFPTWLAPKQVEIIPVNVDLHYDYARNLQDELKSQGVRVEIDDRNEKMGYK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IRE  ++KIP  I+ GDKE     + +R++GS   + V   + I  L  E
Sbjct: 589 IREAQMQKIPYQIVVGDKEVENNQVNVRKYGSQDQETVEKDEFIWNLVDE 638


>gi|310779473|ref|YP_003967806.1| threonyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
 gi|309748796|gb|ADO83458.1| threonyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
          Length = 640

 Score =  643 bits (1658), Expect = 0.0,   Method: Composition-based stats.
 Identities = 294/645 (45%), Positives = 419/645 (64%), Gaps = 16/645 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDP-VREGSIEII 62
            +K+T P G IK F       +VA+SIS SLAKKA+A  ++G+  D+     ++  +E++
Sbjct: 1   MVKITLPSGDIKEFDHAPNMFEVAKSISNSLAKKAIAAKVDGEYVDMRYIADKDAEVELV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TP+      VIRHS AH+MA+AV  ++PE +VAIGP IE+G+YYDFD ++ F+ ++L +I
Sbjct: 61  TPDTEEGEEVIRHSAAHLMAQAVIRLFPETKVAIGPAIENGYYYDFDPKEQFTEEDLVKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M++I+  D    +  ++ E A + FE   E YKVEI+  I   E ++ Y+QGE+ DL
Sbjct: 121 EAEMKKIVKEDIKVERIEMTREDAIKHFEELGENYKVEIITDIAKGEMLSFYKQGEFMDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV ST  +K F KL  +AGAYWRGDS   ML RIYG A++ +++L  +L FLEE+E
Sbjct: 181 CRGPHVPSTKYIKAF-KLKSLAGAYWRGDSKNKMLQRIYGFAFSDEKKLKAHLKFLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLD 301
           KRDHRK+ +E+ LF ++E G G  F+  KG  I   LI   R++  K  YE+I TP +L+
Sbjct: 240 KRDHRKIGKELGLFFMSEYGPGFPFFMPKGMTIRNILIDLWRKEHTKAGYEQIMTPIMLN 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW +YR NM+  +       D   FA+KPMNCPG V  +   + SY++LP+R
Sbjct: 300 KELWETSGHWYNYRENMYTSEI------DETEFAIKPMNCPGGVLAYKQEMHSYKDLPIR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
             E G+V+R+E SG+LHGLMRVR FTQDDAH+F T EQ+ +E + +  LI   Y      
Sbjct: 354 AGELGTVHRHEFSGALHGLMRVRSFTQDDAHIFMTPEQIEDEIIGVIELIDKFYSGLFGF 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
           +  ++LST+PEK +GSD +W+ AE+ ++G +  +           +  G+GAFYGPK ++
Sbjct: 414 EYNIELSTKPEKAIGSDEIWEKAESALEGAMKRLGK------EYKINPGDGAFYGPKLDF 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDAIGR WQCGTIQ+DFNLP RF+  Y+    EK  PVMIHR V+GSIERFIGI+IE+
Sbjct: 468 KIKDAIGRTWQCGTIQLDFNLPERFDINYIGEDGEKHRPVMIHRVVYGSIERFIGILIEH 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  PLW++P Q  + TI    V YA+EI   L+   +  E D R E+I YKIRE + K
Sbjct: 528 YAGAFPLWIAPTQVKILTINDEVVPYAKEIMAKLQEEEIRAEIDSRTESIGYKIREANGK 587

Query: 602 -KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
            K+P+ +I G  E + R + +RRFGS   + + L D + ++ +ES
Sbjct: 588 FKVPVQVILGKDEVANREVNVRRFGSKDQESMKLDDFVKMIKEES 632


>gi|150007315|ref|YP_001302058.1| threonyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503]
 gi|255014060|ref|ZP_05286186.1| threonyl-tRNA synthetase [Bacteroides sp. 2_1_7]
 gi|256839604|ref|ZP_05545113.1| threonyl-tRNA synthetase [Parabacteroides sp. D13]
 gi|166225472|sp|A6L9S2|SYT_PARD8 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|149935739|gb|ABR42436.1| threonyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503]
 gi|256738534|gb|EEU51859.1| threonyl-tRNA synthetase [Parabacteroides sp. D13]
          Length = 651

 Score =  642 bits (1657), Expect = 0.0,   Method: Composition-based stats.
 Identities = 256/649 (39%), Positives = 388/649 (59%), Gaps = 19/649 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEII 62
            IK+TFPD S++ +    T   +AESIS  LA++ +A ++NG+V DLS P+ +  +++++
Sbjct: 1   MIKITFPDNSVREYAKGTTAMQIAESISSRLAQEVLAASVNGEVWDLSRPINDDATVKLL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
             ED        HS AH+MAEA+Q ++P ++  IGP IE+GFYYD D  E      + A 
Sbjct: 61  KWEDEEGKHAFWHSSAHLMAEALQELYPGIKFGIGPAIENGFYYDVDPGEAVIKEGDFAA 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE KM E++A+     +Q ++   A ++F  + E YK E++  +     +T Y QG + D
Sbjct: 121 IEAKMLELVAKKEEIKRQDITKADAMKMFGDRGEEYKTELISEL-EDGTITTYTQGSFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ +T  +K   K++ VAGAYWRGD  R  L R+YG  +  ++ L +YL  LEE+
Sbjct: 180 LCRGPHLPNTSYLK-AVKILSVAGAYWRGDEKRKQLVRLYGITFPKKKMLDEYLTLLEEA 238

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           +KRDHRK+ +EMDLF  ++    G+  W  KG  +   L  ++RR + + +Y+E+  P +
Sbjct: 239 KKRDHRKIGKEMDLFMFSDTVGKGLPMWLPKGTALRLRLQEFLRRIQARYNYQEVMCPPI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            ++ L+  SGH+  Y  + F       T ++   + LKPMNCP H  ++ +  +SY++LP
Sbjct: 299 GNKLLYITSGHYAKYGKDSFQ---PIHTPEEGEEYFLKPMNCPHHCMIYKNSPRSYKDLP 355

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +RLAEFG+V R E SG LHGL RVR FTQDDAH+FC  +Q+  E L + ++I  ++K   
Sbjct: 356 LRLAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKQEFLNVMDIISIVFKTMN 415

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           FE    ++S R     EK +GSD  W+ AE  +    +      +  +   +  GE AFY
Sbjct: 416 FENFEAQISLRDKVNREKYIGSDENWEKAEQAIVEACE------EKGLKAKIEYGEAAFY 469

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDAIGR WQ GTIQVD+NLP RF   Y  + ++K  PVMIHRA FGS+ERF+
Sbjct: 470 GPKLDFMVKDAIGRRWQLGTIQVDYNLPERFQLEYTGADNQKHRPVMIHRAPFGSMERFV 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE+  G  PLWL+P Q  +  I+    +YA +IA  L +  +    D RNE I  KI
Sbjct: 530 AVLIEHTAGKFPLWLTPEQVCIMPISEKFNDYAWQIARELGNQEIRAIVDDRNEKIGRKI 589

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R++ +K+IP ++I G+KEA    + +R+ G      + +     +L  E
Sbjct: 590 RDNELKRIPYMLIVGEKEAENSEVSVRKQGEGDKGSMKIATFAALLNGE 638


>gi|89053589|ref|YP_509040.1| threonyl-tRNA synthetase [Jannaschia sp. CCS1]
 gi|88863138|gb|ABD54015.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Jannaschia sp.
           CCS1]
          Length = 648

 Score =  642 bits (1657), Expect = 0.0,   Method: Composition-based stats.
 Identities = 321/653 (49%), Positives = 434/653 (66%), Gaps = 10/653 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           + I LTFPDG+ +++    T + VA  IS SLAKKA++  ++G   DL  P+  +  I I
Sbjct: 2   AQISLTFPDGNARSYDAGITPAAVAADISNSLAKKAISATVDGAHHDLQWPIDADAQIAI 61

Query: 62  ITPEDPR-SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            T +D   +L +IRH CAHIMA AVQ IWP+V+V IGP+ + G++YDFD+ +PF+ ++L 
Sbjct: 62  HTLKDDDQALELIRHDCAHIMARAVQEIWPDVKVTIGPVRDKGWFYDFDRPEPFTPEDLG 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IE KM+EII        +    ++ R  +E+  E YK+E+L+ IP  E + +Y  G+W 
Sbjct: 122 AIEAKMKEIINARDAVRTEIWDRDRVRAHYEATDEPYKIELLDRIPGDEPIRMYWHGDWQ 181

Query: 181 DLCRGPHVRSTGQ-VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           D+CRGPH++ TGQ     FKLM VA AYW GD+ RPML RIYG A+  + +L +YL FLE
Sbjct: 182 DMCRGPHLQHTGQVPADAFKLMSVAAAYWLGDNTRPMLQRIYGVAFKNRDDLRKYLNFLE 241

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+EKRDHR+L REMDL+H+ E+  G +FWH  GW I+ TL  YMRRK +   Y E+NTPQ
Sbjct: 242 EAEKRDHRRLGREMDLYHMQEEAPGQVFWHPNGWTIYTTLQDYMRRKQRADGYVEVNTPQ 301

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHWD Y+ +MF V+  ++  +     ALKPMNCP HV VFN GLKSYR+L
Sbjct: 302 VVDRALWEKSGHWDKYQEHMFIVEVDEEHAQTKAINALKPMNCPCHVEVFNQGLKSYRDL 361

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFGS  R EPSG+LHG+MRVRGFTQDDAH+FCT++Q+  EC K    +  +YKD 
Sbjct: 362 PLRMAEFGSCSRYEPSGALHGIMRVRGFTQDDAHIFCTEDQIEAECAKFITFLSGVYKDL 421

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE   +  +TRPEKRVG+D  WD  E  ++  + ++ N         +  G+GAFYGPK
Sbjct: 422 GFESFDIAFATRPEKRVGTDEAWDHVEGALEAAIKSVGNP------YRIEEGDGAFYGPK 475

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++ L DAIGR WQCGT QVD NLP R  A YV    +K  P M+HRA  GS ERFIGI+
Sbjct: 476 LDFYLTDAIGRVWQCGTFQVDPNLPERLGASYVGQDGDKHRPYMLHRACLGSFERFIGIL 535

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IEN +G LP WL+P Q +V +I S A E+  E+   LK+  +  E D RNE INYK+REH
Sbjct: 536 IENSEGRLPFWLAPRQVVVASIVSDADEFVHEVVAALKATGIRAEADTRNEKINYKVREH 595

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           S+ K+P I+  G +E   R++ +RR G   T+ V L + +  L  E++ PD +
Sbjct: 596 SVGKVPAILAIGKQEVENRTVTLRRLGEKQTRVVPLAEVVEALAAEAVAPDLR 648


>gi|154249412|ref|YP_001410237.1| threonyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
 gi|154153348|gb|ABS60580.1| threonyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
          Length = 638

 Score =  642 bits (1657), Expect = 0.0,   Method: Composition-based stats.
 Identities = 273/646 (42%), Positives = 409/646 (63%), Gaps = 21/646 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           +++  PDGS++ +    T   +A+ IS  L + A    +NG++ DL  P+  +  + II 
Sbjct: 1   MQIRLPDGSVREYSQPVTPGQIAKEISEGLWRNAAGALVNGQLWDLERPIDFDCELRIIK 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWP--EVQVAIGPIIEDGFYYDFDK-EQPFSSDELA 120
            +DP++  + RH+ +HIMA+AV  I+    V++ IGP IE+GFYYDFD      + ++L 
Sbjct: 61  LDDPQAAEIYRHTMSHIMAQAVMRIYGAENVKLGIGPTIENGFYYDFDIANVKITEEDLP 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IE++M++II  D P  +  L  ++A EL ESK + YK+E++  IP  E V+ Y+QGE+ 
Sbjct: 121 KIEEEMKKIIKEDLPIERLELPKKEAIELMESKGQMYKIELINEIP-DEKVSFYKQGEFI 179

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ STG+VK   KL+ V+GAYWRG+   PML RIYGTA+  + EL  YL  LEE
Sbjct: 180 DLCRGPHLPSTGKVK-HLKLLSVSGAYWRGNEKNPMLQRIYGTAFAKKDELDNYLKMLEE 238

Query: 241 SEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           + KRDHR+L  +++LF I  D  +G+  +   G  + + L+S  R    K  Y+E+ TP 
Sbjct: 239 ARKRDHRRLGPQLELFFINTDVAAGMPIFLPYGMTVLKELMSLSRELHKKYGYKEVGTPL 298

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++ + LW+QSGHWD Y+ NM+       T K+  T+A+KPMNCPGH+ ++ +   SY++L
Sbjct: 299 IMHEKLWRQSGHWDHYKNNMYF------TEKEEVTYAVKPMNCPGHILIYKNKPVSYKDL 352

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RL EFG V+R E  G LHGL+RVR FTQDDAH+FC ++Q+ +E   +   I  +Y  F
Sbjct: 353 PIRLFEFGRVHRYERGGVLHGLLRVRTFTQDDAHIFCREDQIVDEVTNVVRFINELYGIF 412

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF      LST PE  +G +A W+ A   ++  L+ +K      +   V  GEGAFYGPK
Sbjct: 413 GFSY-RATLSTMPEDHMGDEATWEKATEGLRNALEEMK------VPYEVAEGEGAFYGPK 465

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++ ++D +GR+WQC TIQ+DF +P RF+  Y +S   +  PVMIHRA++GSIERF GI+
Sbjct: 466 IDFHVRDVLGREWQCATIQMDFQMPERFDLTYKDSDGNERRPVMIHRALYGSIERFFGIL 525

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE++ G  P WL+P+QA+V  ++    EYA+ I   L  + + +E D RNET++Y+IRE+
Sbjct: 526 IEHYAGAFPTWLAPVQAVVIPVSEKFSEYAKNIYQTLDENDIRVELDDRNETLSYRIREN 585

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            ++K+P +II G+KE    +I +R      T  + + D I  +  E
Sbjct: 586 QMRKVPYMIIVGEKEKESETISVRTREGKDTHGIKINDFIETVLNE 631


>gi|332885366|gb|EGK05615.1| threonyl-tRNA synthetase [Dysgonomonas mossii DSM 22836]
          Length = 650

 Score =  642 bits (1657), Expect = 0.0,   Method: Composition-based stats.
 Identities = 265/649 (40%), Positives = 395/649 (60%), Gaps = 19/649 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+TFPDGS++ F    T   VAESIS  LA+  +A  +NG+V DL+ P+  + +IE++
Sbjct: 1   MIKITFPDGSVREFEKGTTSMQVAESISSRLAQDVLAAKVNGEVWDLTRPIDTDATIELL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
             ED        HS AH+MAEAVQ ++P  +  IGP IE+GFYYD D  + P    +  +
Sbjct: 61  KWEDEDGKHAYWHSSAHLMAEAVQILYPHAKFGIGPAIENGFYYDIDFGDTPVKDADFHK 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE KM E+IA      +Q ++   A ++F  + E YKVE++  +     +T Y QG + D
Sbjct: 121 IEAKMMELIANKEEIKRQSITKTDALKMFGDRNEGYKVELINDL-EDGTITTYTQGVFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ +T  +K   K++  AGAYWRGD  R  L+R+YG  +  ++ L +YL  LEE+
Sbjct: 180 LCRGPHLPNTSYIK-AVKILSAAGAYWRGDEKRKQLTRLYGITFPKKKMLDEYLVMLEEA 238

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           +KRDHRK+ +E++LF  +E+   G+  W  +G ++   L  ++++ + K +Y+++ TP +
Sbjct: 239 KKRDHRKIGKELELFAFSENVGKGLPLWLPRGTQLRLKLEDFLKKIQKKFEYQQVMTPHI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             + L+  SGH+  Y  + F       T ++   F LKPMNCP H  ++    +SYR+LP
Sbjct: 299 GSKLLYVTSGHYAKYGQDSFQ---PIHTPEEGEEFLLKPMNCPHHCEIYKIVPRSYRDLP 355

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AEFG+VYR E SG LHGL RVRGFTQDDAH+FCT EQ+  E LK+ +++  I+K   
Sbjct: 356 LRMAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCTPEQLKEEFLKVMDIVFIIFKALN 415

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           FE    ++S R        +GSDA W+ AE  +    +      +  +   V LGE AFY
Sbjct: 416 FENFEAQISLRDPNNREKYIGSDANWEKAERAIIEACE------EKGLPARVELGEAAFY 469

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDA+GR WQ GTIQVD+NLP RF   Y  + ++K  PVMIHRA FGS+ERFI
Sbjct: 470 GPKLDFMVKDALGRRWQLGTIQVDYNLPERFELEYTGADNQKHRPVMIHRAPFGSMERFI 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE+  G  PLWL+P Q ++  I+    +YA  +++  K   +S + D RNE I  KI
Sbjct: 530 AVLIEHTAGKFPLWLAPDQVVILPISEKFNDYAHRVSHYFKQQGISSQVDDRNEKIGRKI 589

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R++ +K+IP ++I G+KEA    + IR+ G      +  ++    L +E
Sbjct: 590 RDNELKRIPYLLIVGEKEAESEEVSIRKQGDGDKGSMKFVNFAAQLNEE 638


>gi|304439592|ref|ZP_07399496.1| threonine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
 gi|304371904|gb|EFM25506.1| threonine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
          Length = 647

 Score =  642 bits (1657), Expect = 0.0,   Method: Composition-based stats.
 Identities = 269/644 (41%), Positives = 413/644 (64%), Gaps = 17/644 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
             +K++FPDGS K F       DVA+SIS  LA+ A+   +N +V  ++DP+  +  ++I
Sbjct: 11  EMMKISFPDGSSKEFEKGIKVYDVAKSISEGLARNALGAMVNDEVLGVNDPINCDAEVKI 70

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +T ED     +  H+ AH++A A+ ++WPE + AIGP I++GFYYD D E     ++L +
Sbjct: 71  LTFEDKEGKKIFWHTSAHVLAHAIMNLWPETKFAIGPAIDNGFYYDIDLEHKIGPEDLPK 130

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE++MQ+I+        + +  +KA E F+ + + YKVE++E I   ENV +Y+ G + D
Sbjct: 131 IEEEMQKIVKDAHEVTFEIMPRDKAIEFFKERGQDYKVELIEGI-EDENVGIYKMGNFVD 189

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ +   +K F KL+ +AGAYWRGDSN  ML RIYG ++  +++L +Y+  +EE+
Sbjct: 190 LCRGPHIGNVKIIKAF-KLLSIAGAYWRGDSNNKMLQRIYGISFEKKKQLDEYIERMEEA 248

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           EKRDHR++ RE+DLF + ++G G  F+   G  +  TL+++ R   +++ Y EI TP +L
Sbjct: 249 EKRDHRRIGRELDLFTMRDEGPGFPFFLPHGMILKNTLLNWWRNVLLENGYGEIQTPIIL 308

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ LW +SGHWD Y+ NM+  K       D   +A+KPMNCPG + V+     SYR+LP+
Sbjct: 309 NEALWHRSGHWDHYKDNMYFTKI------DGEDYAVKPMNCPGSILVYEEKAHSYRDLPI 362

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RL+EFG V+R+E SG+LHGL RVR FTQDDAHV+C  EQ+ +E  K+ +L   +Y  FGF
Sbjct: 363 RLSEFGQVHRHELSGALHGLFRVRTFTQDDAHVYCLPEQVKDEVFKMIDLAELLYSTFGF 422

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           +  + +LSTRP+  +G+   W+ AE  +K  L+      +  +   +  G+GAFYGPK +
Sbjct: 423 KYEI-ELSTRPDDFMGTIEAWNIAEKNLKDALE------ERGLKYTINEGDGAFYGPKID 475

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           + L+DAIGR WQCGTIQ+DF +P  F   Y+N+  EK  PVM+HRA+ GSIERF+GI+IE
Sbjct: 476 FHLEDAIGRTWQCGTIQLDFRMPENFELTYINADGEKARPVMLHRALLGSIERFMGILIE 535

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +F G  PLWL+P+Q  +  ++    +YA+E+ N LK+    +E D R E + YKIR+  +
Sbjct: 536 HFAGKFPLWLAPVQVEIIPVSEKFHDYAEEVKNKLKTSGFRVEMDTRAEKVGYKIRQAQL 595

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +K+  +++ G++E     + IR+      + V + D I  + +E
Sbjct: 596 RKVNYMLVIGEQEVESGLLSIRKRSGEEVKDVKIEDFISQMKEE 639


>gi|302387069|ref|YP_003822891.1| threonyl-tRNA synthetase [Clostridium saccharolyticum WM1]
 gi|302197697|gb|ADL05268.1| threonyl-tRNA synthetase [Clostridium saccharolyticum WM1]
          Length = 629

 Score =  642 bits (1656), Expect = 0.0,   Method: Composition-based stats.
 Identities = 274/643 (42%), Positives = 410/643 (63%), Gaps = 16/643 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K+   DG+++N+    T   + + +S  LA+ A A  +NG + DL   +  + S+ I+T
Sbjct: 1   MKIQLKDGAVRNYEKPITVIKITKELSEGLARVACAGEVNGNLVDLRYEINEDSSLSILT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            ED +  +  RH+ +HI+A+A++ ++P  ++AIGP IEDGFYYDFD E+  S+D+L+ IE
Sbjct: 61  FEDEKGKSSFRHTTSHILAQAIKRLYPGAKLAIGPAIEDGFYYDFDFEKAISNDDLSAIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M++I+  +    +  L+ ++A    + + E YKV+++  +P  E ++ Y QG++ DLC
Sbjct: 121 NEMKKIVKENFEIKRFTLNRDEAIAFMKKRGEDYKVQLINDLPKDEEISFYEQGDFVDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+ ST  VK F KL  VAGAYWRG+    ML+RIYGT++    EL +YL  +EE++K
Sbjct: 181 AGPHLLSTKYVKAF-KLTSVAGAYWRGNEKNKMLTRIYGTSFPKSSELEEYLTRMEEAKK 239

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQ 302
           RDHRKL +E+ LF + ++G G  F+  KG  +   LI Y R+  + + Y EI+TP +L +
Sbjct: 240 RDHRKLGKELGLFTLMDEGPGFPFFLPKGMILKNLLIDYWRKIHERERYVEISTPMMLSR 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHWD Y+ NM+  K       D   FA+KPMNCPG + V+     SYRELP+R+
Sbjct: 300 KLWETSGHWDHYKDNMYTTKI------DEEDFAIKPMNCPGGLLVYKSVPHSYRELPIRM 353

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            E G V+R+E SG+LHGLMRVR FTQDDAH++ T+EQ+ +E   +  LI  +Y  FGF+ 
Sbjct: 354 GELGLVHRHEKSGALHGLMRVRCFTQDDAHIYMTQEQITDEIKGVVRLIDEVYSKFGFKY 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LST+PE  +GS+A W+ A   ++  LD ++      +N  V  G+GAFYGPK ++ 
Sbjct: 414 H-VELSTKPENSIGSEADWEIATCGLRKALDELQ------MNYVVNEGDGAFYGPKIDFH 466

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+D+IGR WQCGTIQ+DF LP RF A Y+ +  EK  P+MIHR VFGSIERFIGI+IE+F
Sbjct: 467 LEDSIGRTWQCGTIQLDFQLPQRFEAEYIGADGEKHRPIMIHRVVFGSIERFIGILIEHF 526

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P+WL+P+Q  +  I+     Y++E+   LK   +  E D R+E I YKIRE  ++K
Sbjct: 527 AGKFPVWLAPVQIKILPISEKFSTYSKEVLMKLKKADIRCEMDERDEKIGYKIREAQLEK 586

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           +P ++I G+KEA    + +R         +S+   I ++  + 
Sbjct: 587 VPYMLILGEKEAETGMLSVRSREQGDIGIMSIEKIIDLIKSDR 629


>gi|315659856|ref|ZP_07912715.1| threonine--tRNA ligase [Staphylococcus lugdunensis M23590]
 gi|315495144|gb|EFU83480.1| threonine--tRNA ligase [Staphylococcus lugdunensis M23590]
          Length = 638

 Score =  642 bits (1656), Expect = 0.0,   Method: Composition-based stats.
 Identities = 265/647 (40%), Positives = 415/647 (64%), Gaps = 20/647 (3%)

Query: 1   MPSD-IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGS 58
           M +  I + FPDGS K +       DVA+SIS SL K AV   +NG + DL+ P+  +  
Sbjct: 1   MSNQRINIQFPDGSQKAYEQGVLARDVAKSISTSLFKAAVVCRVNGTLVDLTYPLQEDCE 60

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           +   T ED   +  +RH+ AH++A+A+  ++P+V + IGP+I++GFYYD D ++  S  +
Sbjct: 61  LTFYTLEDAEGIEAMRHTAAHVLAQALTRLYPQVLLTIGPVIDNGFYYDIDLDESISEVD 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L +IEK+M++I + +   +K+ +S+++A+ LF+     YK+EI+E     E +++YRQGE
Sbjct: 121 LNKIEKEMKKIQSENLDIVKENVSYDEAKALFK--DNPYKLEIIEQY-QGEQLSVYRQGE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + DLC GPHV +T  VK   KL KV+GAYWRGDS+  ML RIYG A+ +Q +L  Y  FL
Sbjct: 178 FLDLCVGPHVPNTKFVK-HVKLTKVSGAYWRGDSDNKMLQRIYGVAFQSQAQLDDYFEFL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTP 297
            E+E R+HRKL +++ LF  +E+  G+ F+   G  +   + +++R  ++K+DY+E+ TP
Sbjct: 237 REAEARNHRKLGKQLKLFMFSEEAPGMPFYLSNGQFVRNQMENFLREIQLKNDYDEVRTP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +++Q LW++SGHWD Y  NM+  K       D   +ALKPMNCPGH+ +F + L+SY++
Sbjct: 297 LMMNQKLWEESGHWDHYHENMYFTKV------DENDYALKPMNCPGHMLIFKNELRSYKD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFG V+R+E SG+L+GL+RVR F QDDAH+F  K Q+ +E   I  LI  IY  
Sbjct: 351 LPLRMAEFGQVHRHEFSGALNGLLRVRTFCQDDAHIFIMKSQIKSEVEDILKLIDYIYSV 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF   + +LSTRPE  +G   LW++AE  +  VLD +       +   +  G+GAFYGP
Sbjct: 411 FGFTYSI-ELSTRPEDYLGELKLWNEAEQSLANVLDELG------LKYTINEGDGAFYGP 463

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  +KDA+ R  QC T+Q+DF +P +F+  Y+N  +EK  PV++HRA+FGS++RF GI
Sbjct: 464 KIDVHIKDALNRSHQCATVQLDFQMPEKFDLTYINEQNEKERPVVLHRAIFGSLDRFFGI 523

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE+FKG  PLW++P+Q  +  ++ +   Y  ++   L+++++ +  D R+E +  KIRE
Sbjct: 524 LIEHFKGAFPLWMAPVQVNIIGVSDNNTAYVNKVFEALQNNNIRVVIDDRDEKLGKKIRE 583

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
             +KKIP  ++ GD E     +  R++     + + + + I  L +E
Sbjct: 584 SQMKKIPYTLVLGDHEQENNVVSARKYSHEDNEVMDIQNFIAQLQEE 630


>gi|33240514|ref|NP_875456.1| threonyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus
           str. CCMP1375]
 gi|73919816|sp|Q7VBM8|SYT_PROMA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|33238042|gb|AAQ00109.1| Threonyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus
           str. CCMP1375]
          Length = 643

 Score =  642 bits (1655), Expect = 0.0,   Method: Composition-based stats.
 Identities = 307/639 (48%), Positives = 432/639 (67%), Gaps = 15/639 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDG+ + +    T +++A  I   LAK A+A  +NG++ D   P+    +I IIT +
Sbjct: 4   ITLPDGAQRTYSTPVTIAEIAAEIGPGLAKAAIAGEVNGELVDTCIPISVNANINIITSK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           +   + +IRHS AH++  A++ ++P+ ++AIGP+IE+GFYYD   +  FS D+L QIE +
Sbjct: 64  NKEGIDIIRHSFAHLLGHAIKQLYPDAKMAIGPVIENGFYYDIAYKDTFSLDDLNQIELR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           ++E+I +D   + + +S EKAR+ F  + EAYKV+I++ IP  E + LY+  E+ D+CRG
Sbjct: 124 IKELIKQDYDVVVEEVSKEKARKTFLDRDEAYKVQIIDEIPDNETIKLYKHQEYIDMCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +T  ++ F  + KV+GAYWRGDSN  ML RIYGTAW + +EL  YL  +EE+EKRD
Sbjct: 184 PHVPNTKHLRAFSLM-KVSGAYWRGDSNNEMLQRIYGTAWGSTKELEAYLLKIEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHL 304
           HRK+ +++DLFH  E+  G+IFWH KGW I+Q L S++R  +  +DY+EI TPQ +D+ L
Sbjct: 243 HRKIGKKLDLFHTQEEAPGMIFWHPKGWSIYQVLESFIRETLILNDYKEIKTPQTVDRSL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHWD ++ +MF       T  + R +A+KPMNCP H+ VFN GLKSYR+LP+RLAE
Sbjct: 303 WEKSGHWDKFKEDMFT------TTSENREYAIKPMNCPCHIQVFNEGLKSYRDLPIRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNEPSG+LHGLMRVR F QDDAH+FCT+ Q+ +E  K  +L+  +YK FGFE I+
Sbjct: 357 FGSCHRNEPSGALHGLMRVRNFVQDDAHIFCTEAQIQDEVSKFIDLVFDVYKAFGFESII 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +KLSTRP KRVGSD +WD +E  +   L+        +     L GEGAFYGPK E+ LK
Sbjct: 417 IKLSTRPTKRVGSDEIWDKSEKALADALNI------KKFEWSYLPGEGAFYGPKIEFSLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D I R WQCGTIQVDF++P R  A Y++ +S+K  PVM+HRA+ GS ERFIGI+IE ++G
Sbjct: 471 DCIDRVWQCGTIQVDFSMPHRLGASYIDENSQKKVPVMLHRAILGSFERFIGILIEEYEG 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P WLSPIQ IV  IT       +EI+NLL         D RNE +  KIREH++++IP
Sbjct: 531 KFPPWLSPIQVIVIGITDRNSIKCKEISNLLMLRGYRATYDTRNEKVGLKIREHTLQRIP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            ++I GDKE  E ++ +R         + L +   I+ +
Sbjct: 591 YLLIIGDKEQEEGTVSVRTMHGIDMGSMKLTEFQEIINE 629


>gi|154490252|ref|ZP_02030513.1| hypothetical protein PARMER_00484 [Parabacteroides merdae ATCC
           43184]
 gi|154089144|gb|EDN88188.1| hypothetical protein PARMER_00484 [Parabacteroides merdae ATCC
           43184]
          Length = 651

 Score =  642 bits (1655), Expect = 0.0,   Method: Composition-based stats.
 Identities = 259/649 (39%), Positives = 392/649 (60%), Gaps = 19/649 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+TFPD S+K +    T   +AESIS  LA++ +A ++NG++ DL+ P+ ++ +I++ 
Sbjct: 1   MIKITFPDNSVKEYAEGTTAMQIAESISSRLAQEVLAASVNGEIWDLTRPINQDAAIKLF 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
             ED        HS AH+MAEA+Q ++P ++  IGP IE+GFYYD D  E      +   
Sbjct: 61  KWEDEEGKHAFWHSSAHLMAEALQELYPGIKFGIGPAIENGFYYDVDPGEATIKEGDFPA 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE KM E++A+     +Q +S   A ++F  + E YK E++  +     +T Y QG + D
Sbjct: 121 IEAKMLELVAKKEEIKRQDISKADALKMFGDRGEEYKTELISEL-EDGKITTYTQGAFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ +T  +K   K+M VAGAYWRGD  R  L R+YG  +  ++ L +YL  +EE+
Sbjct: 180 LCRGPHLPNTSYLK-AVKIMSVAGAYWRGDEKRKQLVRLYGITFPKKKMLDEYLALMEEA 238

Query: 242 EKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           +KRDHRK+ +E++LF  +   G+G+  W  +G ++   L  +++R + K  Y+++ TP +
Sbjct: 239 KKRDHRKIGKELELFTFSTAVGAGLPLWLPRGTQLRLKLEDFLKRIQKKYGYQQVMTPHI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             + L+  SGH+  Y  + F       T ++   F LKPMNCP H  +F    +SY++LP
Sbjct: 299 GGKQLYVTSGHYAKYGKDSFQ---PIHTPQEGEEFLLKPMNCPHHCEIFKSFPRSYKDLP 355

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R AEFG+VYR E SG LHGL RVRGFTQDDAH+FC  +Q+ +E LK+ ++I  I+K   
Sbjct: 356 LRFAEFGTVYRYEQSGELHGLTRVRGFTQDDAHLFCRPDQLKDEFLKVMDIIFIIFKALD 415

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           FE    ++S R     +K +GS+  W+ AE+ +      I+   +  +   +  GE AFY
Sbjct: 416 FENFEAQISLRDKVNRDKYIGSEENWEKAESAI------IEACQEKGLKAKIEYGEAAFY 469

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDAIGR WQ GTIQVD+NLP RF   Y    ++K  PVMIHRA FGS+ERF+
Sbjct: 470 GPKLDFMVKDAIGRRWQLGTIQVDYNLPERFELEYTGEDNKKHRPVMIHRAPFGSMERFV 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE+  G  PLWL+P Q  +  I+    +YA E+   L++  LS+  D RNE I  KI
Sbjct: 530 AVLIEHTGGKFPLWLTPDQVAILPISEKFNDYAYEVKRQLEAEDLSVLVDDRNEKIGRKI 589

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R+  +K+IP ++I G+KEA    + +R+ G      + +     +L  E
Sbjct: 590 RDTELKRIPYMLIVGEKEAENNEVSVRKQGEGDKGSMKITTFAALLKGE 638


>gi|149276293|ref|ZP_01882437.1| threonine--tRNA ligase (threonine tRNA synthetase) [Pedobacter sp.
           BAL39]
 gi|149232813|gb|EDM38188.1| threonine--tRNA ligase (threonine tRNA synthetase) [Pedobacter sp.
           BAL39]
          Length = 641

 Score =  641 bits (1654), Expect = 0.0,   Method: Composition-based stats.
 Identities = 269/651 (41%), Positives = 400/651 (61%), Gaps = 19/651 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            I +T PDGS + +    T   +A SIS  LA+  +A  +NG++ D S  +  + S++++
Sbjct: 1   MINITLPDGSSRQYEQGTTAHQIALSISEGLARNVLAAEVNGEIWDSSRAINADASVKLL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
           T  D    +   HS AHIMAEA+++++P  +  IGP IE GFYYD D  ++ FSSD+   
Sbjct: 61  TWNDAAGKSTFWHSSAHIMAEALEALYPGTKFGIGPAIETGFYYDVDFGDREFSSDDFKA 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE K+ E+  +   F ++ +S   A + F  K + YK+++LE +     +T Y QGE+ D
Sbjct: 121 IETKILELAKQKEVFERKDISKADAIQYFTEKGDEYKLDLLEGL-EDGKITFYSQGEFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ +TG VK   KLM VAGAYWRGD  R  L+RIYG  +    ELT+YL+ +EE+
Sbjct: 180 LCRGPHIPNTGFVK-AVKLMNVAGAYWRGDETRKQLTRIYGVTFPKASELTEYLHMIEEA 238

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           +KRDHRKL +E++LF  +E    G+  W  KG  + + L+ ++ R + K  YE++ TP +
Sbjct: 239 KKRDHRKLGKELELFAFSEKVGMGLPLWLPKGAALRERLVQFLTRAQAKSGYEQVVTPHI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             ++L+  SGH++ Y  + F       T ++   F LKPMNCP H  ++    +SY++LP
Sbjct: 299 GHKNLYITSGHYEKYGKDSFQ---PIKTPQEGEEFFLKPMNCPHHCEIYKVKPRSYKDLP 355

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R AEFG+VYR E SG LHGL RVRGFTQDDAH+FC  +Q+  E  K+ +L++ ++K  G
Sbjct: 356 LRFAEFGTVYRYEQSGELHGLTRVRGFTQDDAHLFCRPDQVKEEFKKVIDLVLYVFKSLG 415

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           F   + ++S R        +GSD  W  AE+        I+ +++  + T V  GE AFY
Sbjct: 416 FNDYIAQVSLRDPDNKAKYIGSDENWQLAESA------IIEAAAEKGLPTVVEYGEAAFY 469

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDA+GR WQ GTIQVD+NLP RF   Y  S + K  PVMIHRA FGS+ERFI
Sbjct: 470 GPKLDFMVKDALGRKWQLGTIQVDYNLPERFELEYTGSDNLKHRPVMIHRAPFGSLERFI 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE+  GN PLWLSP Q I+  I+    +YA+++++ L +  +    DFR+E I  KI
Sbjct: 530 AVLIEHCAGNFPLWLSPEQFIILPISEKYEDYAKKVSDELNNSDIRGLIDFRDEKIGRKI 589

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           R+  +KKIP ++I G+KE +E  + +R+ G      ++  +   +L KE  
Sbjct: 590 RDAEVKKIPYMLIIGEKEMAEGKVSVRKHGEGDLGAMTQQEFSELLIKEIT 640


>gi|94971761|ref|YP_593809.1| threonyl-tRNA synthetase [Candidatus Koribacter versatilis
           Ellin345]
 gi|94553811|gb|ABF43735.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Candidatus
           Koribacter versatilis Ellin345]
          Length = 659

 Score =  641 bits (1654), Expect = 0.0,   Method: Composition-based stats.
 Identities = 275/661 (41%), Positives = 408/661 (61%), Gaps = 30/661 (4%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVA-----ING-----KVCDL 50
           M   IK+  PDGS+K      T  D+A+ IS  LA  A+A        NG     ++ DL
Sbjct: 1   MSDQIKVKLPDGSVKEVSKGTTALDIAKGISPRLADAALAAKVAPLPHNGDQPEARLVDL 60

Query: 51  SDPVREGS-IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD 109
           + P+ E S ++++T  DP +L V RHS AH++A AV  ++PE ++  GP  E+GF+YDF 
Sbjct: 61  TRPLEEDSELKLLTDRDPEALEVYRHSSAHLLAAAVLDLFPETKLGHGPSTENGFFYDFY 120

Query: 110 KEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPA-K 168
           ++ PF+ ++L +IEK+MQE++  D P+ +++L  E++ E F+++ +  K   +E      
Sbjct: 121 RQTPFTPEDLEKIEKRMQELVKEDVPYAREFLPREESLERFKTEGDFMKCHFIEQFTKPD 180

Query: 169 ENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQ 228
           E +++Y+ G++ D CRGPH+ STG++K F KL+ +AGAYW GD   P L RIYGT++ ++
Sbjct: 181 EKISIYKTGKFLDFCRGPHIPSTGKIKAF-KLLNIAGAYWLGDEKNPQLQRIYGTSFFSK 239

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRRKI 287
           +++ +Y   LEE++KRDHR L +++DLF I E  G G+IFWH KG  I + +  +MR + 
Sbjct: 240 KDMDEYFAKLEEAKKRDHRVLGKQLDLFSIQELAGPGLIFWHPKGGIIRKEMEDWMREEY 299

Query: 288 -KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA 346
            K  Y  + TP V    LW+ SGH   Y+ N F     DD       + LKPMNCPGHV 
Sbjct: 300 LKRGYSLVVTPHVARTDLWKISGHTGYYKQNFFTPMELDDA-----EYMLKPMNCPGHVL 354

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           ++   L+SYR+LP+RL E G+VYR E SG +HGL+RVRGFTQDDAH+FCT  Q+ +E   
Sbjct: 355 IYRDQLRSYRDLPMRLGEMGTVYRYERSGVMHGLLRVRGFTQDDAHIFCTPSQIEDEISG 414

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDR 462
             +  IS+   +GF +  V+LS          +G+D  W+ A+  +K VLD         
Sbjct: 415 CIDFAISVLHTYGFNEFKVELSEWDPNDRKSFIGTDEQWNLAQGSLKKVLDA------RG 468

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
           I    + GE AFYGPK +  L DAIGR WQ  T+Q DF LP RF   YV    ++  P+M
Sbjct: 469 IPYKSMPGEAAFYGPKIDVKLVDAIGRLWQLSTVQFDFTLPQRFELEYVGEDGKRHQPLM 528

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSI 582
           +HRA++GSIERF G++IE++ G  P+WLSP+Q ++  I    +EYA ++ ++LK+  + +
Sbjct: 529 VHRALYGSIERFFGVLIEHYAGAFPVWLSPVQTVLVPIGEKHLEYANKVGDVLKAKGIRV 588

Query: 583 ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           E D RNE +N KIREH+++K+P I++ GDKEA   S+ +R  G   T+ V L   +  + 
Sbjct: 589 EVDGRNEKMNAKIREHALQKVPFILVVGDKEAEATSVNVRTRGKDKTETVPLDSFVERIE 648

Query: 643 K 643
           K
Sbjct: 649 K 649


>gi|257452295|ref|ZP_05617594.1| threonyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|317058838|ref|ZP_07923323.1| threonyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|313684514|gb|EFS21349.1| threonyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
          Length = 637

 Score =  641 bits (1654), Expect = 0.0,   Method: Composition-based stats.
 Identities = 296/644 (45%), Positives = 416/644 (64%), Gaps = 16/644 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K+ F DG ++ F        VA+SIS SLAKKAVA  I+G++ D+S  +  +  +E I 
Sbjct: 1   MKIEFLDGKVQEFHEACNMFVVAKSISNSLAKKAVAAKIDGELYDMSYVLDHDAKVEFIM 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           PE    + VIRHS AH+MA+AV  ++P  +V IGP IE+GFYYDFD ++ F+ ++L +IE
Sbjct: 61  PESEEGVEVIRHSAAHLMAQAVIRLFPGTKVTIGPAIENGFYYDFDPKEQFTEEDLIRIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           ++M+++   D    +  +S E+A E FE   E YKVEI++ I   E ++ YRQG++ DLC
Sbjct: 121 EEMKKLSKEDIKVERFMMSREEAIEYFEKLGENYKVEIIKEIAKGEQLSFYRQGDFVDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV STG +K   KL  VAGAYWRGDS   ML RIYG A+ T+++L  +L  +EE+EK
Sbjct: 181 RGPHVPSTGHIK-AVKLKSVAGAYWRGDSKNKMLQRIYGYAFATEKDLKDFLRLMEEAEK 239

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQ 302
           RDHRKL +E++LF ++E G G  F+  KG  +  TLI   R    K  Y +I+TP +L++
Sbjct: 240 RDHRKLGKELELFFLSEYGPGFPFFLPKGMVLRNTLIDLWRAEHEKAGYVQIDTPIMLNR 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW +YR NM+       +  D   FA+KPMNCPG V  F +   SYR+LP R+
Sbjct: 300 ELWEISGHWFNYRENMYT------SSIDDVDFAIKPMNCPGGVLAFKYQQHSYRDLPARV 353

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AE G V+R+E SG+LHGL RVR FTQDD+H+F T+EQ+ +E + + NLI   Y      +
Sbjct: 354 AELGKVHRHEFSGALHGLFRVRAFTQDDSHIFMTEEQIESEIIGVVNLIDKFYSKLFGFQ 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             ++LSTRPEK +G+D +W+ AE  + G L+ +           +  G+GAFYGPK ++ 
Sbjct: 414 YSIELSTRPEKSIGTDEIWEKAETALAGALNHLGR------EFKINEGDGAFYGPKLDFK 467

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDAIGR WQCGTIQ+DFNLP RF+  Y+    EK  PVMIHR ++GSIERFIGI+IE++
Sbjct: 468 IKDAIGRTWQCGTIQLDFNLPERFDVTYIGEDGEKHRPVMIHRVIYGSIERFIGILIEHY 527

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH-SIK 601
            G  P+WL+P+Q  V TI      YA+E+   LK   +  E D R+E+I YKIRE     
Sbjct: 528 AGAFPMWLAPVQVKVLTINDECAPYAKEVVAQLKEQGIRAELDDRSESIGYKIREANGRY 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           KIP+ +I G  E  +R + +RRFGS   + + L   + ++ +E+
Sbjct: 588 KIPMQVIIGKNEIEKREVNVRRFGSQAQESMELDAFLAMVKEEA 631


>gi|121610033|ref|YP_997840.1| threonyl-tRNA synthetase [Verminephrobacter eiseniae EF01-2]
 gi|166225514|sp|A1WMG5|SYT_VEREI RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|121554673|gb|ABM58822.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase
           [Verminephrobacter eiseniae EF01-2]
          Length = 639

 Score =  641 bits (1654), Expect = 0.0,   Method: Composition-based stats.
 Identities = 318/647 (49%), Positives = 429/647 (66%), Gaps = 19/647 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            I +T PDGS + FP   T ++VA SI   LAK A+A  I  ++ D S  +  +  + II
Sbjct: 1   MIHITLPDGSQRAFPGPVTVAEVAASIGPGLAKAALAGKIGDQLLDTSHRITADCRLSII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   L +IRHS AH++A AV+ ++PE QV IGP+I++GFYYDF  ++PF+ D+L  +
Sbjct: 61  TDKDDAGLELIRHSTAHLLAYAVKELFPEAQVTIGPVIDNGFYYDFAYQRPFTPDDLVAM 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M E+ A+D P L++ L  + A   F+   E YK EI+  IP  E V+LYR+G + DL
Sbjct: 121 EKRMAELAAKDEPVLRRVLPRDAAIAYFKGLGEHYKAEIIAGIPGDEEVSLYREGSFEDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG++K FFKLMKVAGAYWRGD    ML R+YGTAW +++ L QYL  LEE+E
Sbjct: 181 CRGPHVPSTGKLK-FFKLMKVAGAYWRGDHRNQMLQRVYGTAWASKEALQQYLTMLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD 301
           KRDHRKL RE+DLFHI E   G +FWH KGW ++Q +  YMRR  + + Y+E+  PQ+LD
Sbjct: 240 KRDHRKLGRELDLFHIDEHSPGTVFWHPKGWTLWQEVEQYMRRVYRDNGYQEVKGPQILD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           Q LW+++GHWD YR NMF       T  + R +ALKPMNCPGH+ +F  G+KSYR+LP+R
Sbjct: 300 QGLWEKTGHWDKYRENMFV------TESEKRDYALKPMNCPGHIIIFKQGIKSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
             EFG  +RNEPSG LHG+MRVR FTQDD H+FCT +Q+ +E L    L+  +Y+DFGF 
Sbjct: 354 FGEFGQCHRNEPSGGLHGIMRVRAFTQDDGHIFCTAQQIQSEILAFTALVQKVYRDFGFT 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            I+ KL+TRPEK +G++  WD AE+ +   L               L GEGAFYGPK EY
Sbjct: 414 DIIYKLATRPEKHIGTEESWDQAEHALAQGLRASGC------EFEYLPGEGAFYGPKVEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            LKDA+GR WQCGTIQVD N+P R +A +V     +  P+M+HRA+ GS+ERFIGI++E 
Sbjct: 468 TLKDALGRQWQCGTIQVDPNMPERLDAEFVGEDGARHRPIMLHRAIVGSLERFIGILLEQ 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSH----HLSIETDFRNETINYKIRE 597
             G LP WL+P+Q  +  IT +  +Y +EIA  ++       L +  D RNE I YKIRE
Sbjct: 528 HAGALPAWLAPVQLALLNITEAQSDYCREIAAKMQKALSHLGLRLLLDLRNEKITYKIRE 587

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           HS++K+P I++ GDKE +  ++ +R  G      +S+   I  +  E
Sbjct: 588 HSMQKLPYILVAGDKERAAGAVAVRARGHGDLGVMSVDAFIERIADE 634


>gi|223932680|ref|ZP_03624679.1| threonyl-tRNA synthetase [Streptococcus suis 89/1591]
 gi|223898650|gb|EEF65012.1| threonyl-tRNA synthetase [Streptococcus suis 89/1591]
          Length = 650

 Score =  641 bits (1654), Expect = 0.0,   Method: Composition-based stats.
 Identities = 257/651 (39%), Positives = 408/651 (62%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            +K+TFPDG+++++    T  ++AESIS+SLAKKA+A   NGK+ D +  +  +G++EI+
Sbjct: 1   MLKITFPDGAVRDYQAGVTTFEIAESISKSLAKKALAGKFNGKLIDTTRAIEEDGTLEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQ 121
           TP+   +L ++RHS AH+ A+A + ++P++++ +GP I+DGFYYD D      S+++L +
Sbjct: 61  TPDHEDALDILRHSAAHLFAQAARRLFPDIKLGVGPAIQDGFYYDTDNAAGQISNEDLPR 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWF 180
           I+++M +I+  + P  ++ ++ E+A ++F+   + YK+E+++     E  +T+Y QGE+ 
Sbjct: 121 IQEEMMKIVKENFPSERREVTKEEALDIFK--NDPYKLELIQEHSDDEGGLTIYTQGEYV 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV STG+++ F +L+ VAGAYWRG S  PM+ R+YGTAW  +++L  YL   EE
Sbjct: 179 DLCRGPHVPSTGRIQIF-ELLNVAGAYWRGKSENPMMQRVYGTAWFDKKDLKAYLQMREE 237

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           +++RDHRKL +E+DLF I+++   G+ FW   G  I +TL  Y+  +++   Y+ + TP 
Sbjct: 238 AKERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRTLERYITDKELASGYQHVYTPP 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L++ SGHWD Y  +MF          D   F L+PMNCP H+ V+ + ++SYREL
Sbjct: 298 LASVELYKTSGHWDHYHEDMFPTMDMG----DGEEFVLRPMNCPHHIQVYKNHVRSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           PVR+AE G ++R E SG+L GL RVR  T +D H+F T EQ+  E  K   LII +Y DF
Sbjct: 354 PVRIAELGMMHRYEKSGALTGLQRVREMTLNDGHIFVTPEQIQEEFKKALQLIIDVYADF 413

Query: 419 GFEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
                  +LS R      K   +D +W++A+ ++KG +D +       ++     GE AF
Sbjct: 414 NLNDYRFRLSYRDPEDKEKYYDNDEMWENAQRMLKGAMDEMG------VDYFEAEGEAAF 467

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K A+G +    TIQ+DF LP RF   Y+ +  E+  PVMIHR V  ++ERF
Sbjct: 468 YGPKLDIQVKTALGNEETLSTIQLDFLLPERFGLTYIGADGEEHRPVMIHRGVISTMERF 527

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
             I+IE +KG  P WL+P Q  +  I+  + ++YA ++A  L+   + +  D RNE + Y
Sbjct: 528 TAILIETYKGAFPTWLAPTQVTMIPISVEAHLDYAWKVAKELQDRGVRVHVDERNEKMQY 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR+    KIP  +I GDKE  + ++ +RR+GS  TQ  S+ + +  +  +
Sbjct: 588 KIRQSQTSKIPYQLIVGDKEMEDNAVNVRRYGSKATQTQSVSEFVDHILAD 638


>gi|298206753|ref|YP_003714932.1| threonyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
 gi|83849384|gb|EAP87252.1| threonyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
          Length = 648

 Score =  641 bits (1652), Expect = 0.0,   Method: Composition-based stats.
 Identities = 254/649 (39%), Positives = 398/649 (61%), Gaps = 19/649 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +T PDGS+K F   AT  DVA+SIS  LA+  ++ + NG   + + P+  +GS+ + 
Sbjct: 1   MINITLPDGSVKEFEAGATAMDVAKSISEGLARNVISASFNGTKVETTTPLHEDGSLILF 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
           T  D        HS +H+MA+A+Q ++P +++ IGP I++GFYYD D  +Q  S ++  +
Sbjct: 61  TFRDEEGKKAFWHSTSHVMADALQQLYPGIKLTIGPAIDNGFYYDIDFGDQKISENDFKK 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE KM EI      F  + ++  +A E ++++   +KVE++E++   + +T      + D
Sbjct: 121 IEDKMLEIARGKHEFQLRSVTKAEALEFYKNENNPFKVELIENLTDGD-ITFCDHSNFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG H+ +TG +K   KL+ +AGAYWRGD   P L+R+YG ++  Q+EL +YL  LEE+
Sbjct: 180 LCRGGHIPNTGIIK-AVKLLNIAGAYWRGDEKNPQLTRVYGVSFPKQKELKEYLELLEEA 238

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           ++RDHRKL +E+ LF  ++    G+  W  KG  + + L +++++ + K  YE + TP +
Sbjct: 239 KRRDHRKLGKELSLFTFSQKVGQGLPLWLPKGAALRERLENFLKKAQKKAGYEMVVTPHI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             + L+  SGH+  Y  + F       T  +   F LKPMNCP H  ++N+   SYR+LP
Sbjct: 299 GQKELYVTSGHYAKYGEDSFQ---PISTPAEGEEFLLKPMNCPHHCEIYNNSPWSYRDLP 355

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
            R AEFG+VYR E SG LHGL RVRGFTQDDAH+FCT +Q+  E  K+ +L + ++   G
Sbjct: 356 KRYAEFGTVYRYEQSGELHGLSRVRGFTQDDAHIFCTPDQLDEEFKKVIDLTMYVFSSLG 415

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           FE    ++S R  +     +G +  W+ AEN +   +          +N  V  GE AFY
Sbjct: 416 FENFTTQVSLRDPENPDKYIGKEENWEKAENAILSAVKD------KGLNYIVETGEAAFY 469

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDA+GR WQ GTIQVD+NLP RF+  Y  S +E   PVMIHRA FGS+ERF+
Sbjct: 470 GPKLDFMVKDALGRSWQLGTIQVDYNLPERFDLTYKGSDNELHRPVMIHRAPFGSMERFV 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            I++E+  GN PLWL P QAI+ +++     Y++++ NLL++H +   TD R+ET+  KI
Sbjct: 530 AILLEHTAGNFPLWLMPEQAIILSLSEKYENYSKKVLNLLENHEIRALTDHRSETMGKKI 589

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           RE  + KIP ++I G++E ++ ++ +R+ G      +++ +   ++ +E
Sbjct: 590 REAEVNKIPYMLIVGEQEENDGTVSVRKHGGEDLGTMTVEEFSKLVNEE 638


>gi|241764278|ref|ZP_04762308.1| threonyl-tRNA synthetase [Acidovorax delafieldii 2AN]
 gi|241366347|gb|EER60877.1| threonyl-tRNA synthetase [Acidovorax delafieldii 2AN]
          Length = 639

 Score =  641 bits (1652), Expect = 0.0,   Method: Composition-based stats.
 Identities = 325/647 (50%), Positives = 436/647 (67%), Gaps = 19/647 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEII 62
            I +T PDGS + FP   T ++VA SI   LAK A+A  I  KV D S  + + S + I+
Sbjct: 1   MIHITLPDGSQREFPGPVTVAEVAASIGAGLAKAALAGKIGDKVVDTSYQITQDSPLSIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   L VIRHS AH++A AV+ ++PE QV IGP+IE+GFYYDF  ++PF+ ++L  I
Sbjct: 61  TAKDADGLEVIRHSTAHLLAYAVKELFPEAQVTIGPVIENGFYYDFAYKRPFTPEDLVAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M E+ A+D P  ++ L  ++A   F+   E YK EI+ SIP+ E+V+LYR+G + DL
Sbjct: 121 EKRMAELAAKDEPIARRVLPRDEAVAYFKGLGENYKAEIIASIPSNEDVSLYREGRFEDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG++K FFKLMKVAGAYWRGD    ML R+YGTAW T+ EL QYL  LEE+E
Sbjct: 181 CRGPHVPSTGKLK-FFKLMKVAGAYWRGDHRNEMLQRVYGTAWATKDELQQYLTMLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD 301
           KRDHRKL RE+DLFHI +   GV+FWH KGW ++Q +  YMRR  + + Y E+  PQ+LD
Sbjct: 240 KRDHRKLGRELDLFHIDDHAPGVVFWHPKGWAVWQQVEQYMRRVYRDNGYLEVKGPQLLD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+++GHWD YR NMF       T  + R +ALKPMNCPGH+ +F  G+KSYR+LP+R
Sbjct: 300 KTLWEKTGHWDKYRDNMFT------TESEKRDYALKPMNCPGHILIFKQGIKSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
             EFG  +RNEP+G LHG+MRVRGFTQDD H+FCT++ +  EC     L+  +YKDFGF 
Sbjct: 354 YGEFGQCHRNEPTGGLHGIMRVRGFTQDDGHIFCTEDHILPECTAYTALLQKVYKDFGFS 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            I+ K++TRPE R+GSD  WD AE+ +   L              +  G+GAFYGPK EY
Sbjct: 414 NIIYKVATRPEARIGSDESWDKAEHALMESLRASGC------EFEIAPGDGAFYGPKIEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            LKDAIGR WQCGT+QVDF++P R +A YV     +  PVM+HRA+ GS+ERFIGI+IE 
Sbjct: 468 TLKDAIGRQWQCGTMQVDFSMPERLDAEYVGEDGARHRPVMLHRAIVGSLERFIGILIEQ 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKS----HHLSIETDFRNETINYKIRE 597
             G LP WL+P+Q  V  IT +  +Y +EIA  L+       L +  D RNE I YKIRE
Sbjct: 528 HSGALPTWLAPVQISVLNITDAQADYCREIAAKLQKLLPHQDLRVGLDLRNEKITYKIRE 587

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           HS++K+P I++ GDKE +  ++ +R  G+     +S+     ++ ++
Sbjct: 588 HSLQKLPYILVAGDKEKAAGAVAVRARGNRDLGVMSVEAFAELIAQD 634


>gi|255035014|ref|YP_003085635.1| threonyl-tRNA synthetase [Dyadobacter fermentans DSM 18053]
 gi|254947770|gb|ACT92470.1| threonyl-tRNA synthetase [Dyadobacter fermentans DSM 18053]
          Length = 647

 Score =  641 bits (1652), Expect = 0.0,   Method: Composition-based stats.
 Identities = 250/651 (38%), Positives = 391/651 (60%), Gaps = 19/651 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEI 61
           S +K+T PDGS + +P   T  ++A SIS  LA+  +A  +N +V D +  + E S +++
Sbjct: 5   SQVKITLPDGSERFYPKGVTALEIALSISEGLARNVIAAKVNNEVWDPTRQITEDSLVKL 64

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELA 120
           +T  D    A   HS AH++AEA+++++P ++   GP IE GFYYD D   Q  S ++  
Sbjct: 65  LTWNDEDGKATFWHSSAHLLAEALEALYPGIKFGTGPSIEKGFYYDVDLGGQTISQEDFP 124

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IE KM E+  + + ++++ +S  +A + F  K + YK+E+++ +    ++TLY QG + 
Sbjct: 125 KIEAKMLELARQKNEYIRKPISKAEAIDYFTQKGDEYKLELIDGL-EDGSITLYEQGSFT 183

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ +TG +K   KL  +AGAYWR      ML+RIYG  +  Q+EL +Y+  +EE
Sbjct: 184 DLCRGPHIPNTGFIKAA-KLTNIAGAYWRNKQENKMLTRIYGITFPKQKELEEYVTLMEE 242

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           ++KRDHR+L +E++LF  +E    G+  W  KG  + + L +++ + + +  Y  + TP 
Sbjct: 243 AKKRDHRRLGKELELFAFSEKVGQGLPLWLPKGAMLRERLQAFLSKAQSRAGYVPVITPH 302

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +  + L+  SGHWD Y  + F       T      + LKPMNCP H  ++    +SY++L
Sbjct: 303 IGSKDLYVTSGHWDKYGKDSFQ---PIKTPNLDEEYMLKPMNCPHHCEIYKTSPRSYKDL 359

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R +EFG+VYR E SG LHGL RVRGFTQDDAH+FC  +Q+  E +++ +L++ ++K  
Sbjct: 360 PLRFSEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCRPDQVKEEFIRVIDLVLYVFKSL 419

Query: 419 GFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           GF     ++S R        +G D  W+      K     I+ +++  ++T   LGE AF
Sbjct: 420 GFNDYSAQISLRDPNNKEKYIGKDEDWE------KAESAIIEAAAERGLSTVTELGEAAF 473

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +++++DA+GR WQ GTIQVD+ LP RF   Y  S ++K  PVMIHRA FGS+ERF
Sbjct: 474 YGPKLDFMVRDALGRKWQLGTIQVDYQLPQRFQLEYTGSDNQKHRPVMIHRAPFGSMERF 533

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             I+IEN  G  PLWLSP Q  +  I+    +YA+E+   L+ H +    D R+E I  K
Sbjct: 534 TAILIENTAGQFPLWLSPDQIAILPISEKFADYAEEVFFQLQDHDIRGFVDHRDEKIGRK 593

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           IR+  + K+P ++I G+KEA+E  + +RR G      +++ +      KE+
Sbjct: 594 IRDAEVTKVPFMLIVGEKEAAEGKLSVRRKGEGDLGSMTIEEFAAFFKKEA 644


>gi|313202757|ref|YP_004041414.1| ser-tRNA(thr) hydrolase; threonyL-tRNA synthetase [Paludibacter
           propionicigenes WB4]
 gi|312442073|gb|ADQ78429.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Paludibacter
           propionicigenes WB4]
          Length = 648

 Score =  641 bits (1652), Expect = 0.0,   Method: Composition-based stats.
 Identities = 260/649 (40%), Positives = 395/649 (60%), Gaps = 19/649 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            IK+TFPDGS++ F    TG  +AESIS  LA++ +A+ +N ++ DL+ P+  + +I++ 
Sbjct: 1   MIKVTFPDGSVREFAKGITGLQLAESISSRLAQEVLAITVNDEIWDLTRPIETDAAIKLH 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
             +D  +     HS AH+MAEA+Q ++P ++  IGP IE+GFYYD D  E      +L  
Sbjct: 61  KWDDEEAKHAFWHSSAHLMAEALQELYPGIKFGIGPAIENGFYYDVDPGEVSIKEGDLPV 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE KM E+  R    ++  +S   A + F    E YK E++E++     +TLY QG + D
Sbjct: 121 IEAKMLELAQRKEAIVRSDISKADALKRFGDIGEVYKTEMIEAL-EDGKITLYTQGNFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ +TG +K   K++ VAGAYWRGD  R ML+R+YG  +  ++ L +YL  LEE+
Sbjct: 180 LCRGPHLPNTGDIK-AIKVLSVAGAYWRGDEKRKMLTRLYGITFPKKKMLDEYLVLLEEA 238

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQV 299
           +KRDHRK+ +E++LF  +E    G+  W  +G  +   L  ++++  +  DY+++ TP +
Sbjct: 239 KKRDHRKIGKELELFMFSEMVGKGLPMWLPRGTALRLRLEDFLKKIQRRFDYQQVMTPHI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            ++ L+  SGH+  Y  + F       T ++   + LKPMNCP H  ++    +SY+ELP
Sbjct: 299 GNKQLYVTSGHYAKYGKDSFQ---PIHTPEEGEEYLLKPMNCPHHCEIYKFKPRSYKELP 355

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           VRLAEFG+VYR E SG LHGL RVR FTQDDAH+FC  +Q+ +E LK+ ++I  I+    
Sbjct: 356 VRLAEFGTVYRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKDEFLKVMDIIFIIFNALE 415

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           FE    ++S R        +GSD  W+ AE  +      I+  ++  +   V  GE AFY
Sbjct: 416 FENFEAQISLRDPNNREKYIGSDENWEKAEQSI------IEACAEKGLKARVETGEAAFY 469

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +++++DAIGR WQ GTIQVD+NLP RF   Y    ++K  PVMIHRA FGS+ERF+
Sbjct: 470 GPKLDFMVRDAIGRKWQLGTIQVDYNLPERFELEYTGEDNQKHRPVMIHRAPFGSMERFV 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE+  G  PLWL+P Q ++  I+    +YA +IA  + +  + ++ D RNE I  KI
Sbjct: 530 AVLIEHTAGKFPLWLTPDQVVILPISEKFNDYAFQIAKEMNAQDIRVQVDDRNEKIGRKI 589

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R++ +K+IP ++I G+KEA    + +RR G      + + D   ++  E
Sbjct: 590 RDNELKRIPYMLIVGEKEAENGEVSVRRQGEGDKGTMKVADFSKLILDE 638


>gi|289549510|ref|YP_003470414.1| Threonyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01]
 gi|289179042|gb|ADC86287.1| Threonyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01]
          Length = 638

 Score =  641 bits (1652), Expect = 0.0,   Method: Composition-based stats.
 Identities = 265/647 (40%), Positives = 414/647 (63%), Gaps = 20/647 (3%)

Query: 1   MPSD-IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGS 58
           M +  I + FPDGS K +       DVA+SIS SL K AV   +NG + DL+ P+  +  
Sbjct: 1   MSNQRINIQFPDGSQKAYEQGVLARDVAKSISTSLFKAAVVCRVNGTLVDLTYPLQEDCE 60

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           +   T ED   +  +RH+ AH++A+A+  ++P+V + IGP+I++GFYYD D ++  S  +
Sbjct: 61  LTFYTLEDAEGIEAMRHTAAHVLAQALTRLYPQVLLTIGPVIDNGFYYDIDLDESISEVD 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L +IEK+M++I + +   +K+ +S+++A+ LF+     YK+EI+E     E +++YRQGE
Sbjct: 121 LNKIEKEMKKIQSENLDIVKENVSYDEAKALFK--DNPYKLEIIEQY-QGEQLSVYRQGE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + DLC GPHV +T  VK   KL KV+GAYWRGDS+  ML RIYG A+ +Q +L  Y  FL
Sbjct: 178 FLDLCVGPHVPNTKFVK-HVKLTKVSGAYWRGDSDNKMLQRIYGVAFQSQAQLDDYFEFL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTP 297
            E+E R+HRKL +++ LF  +E+  G+ F+   G  +   + +++R  ++K+DY+E+ TP
Sbjct: 237 REAEARNHRKLGKQLKLFMFSEEAPGMPFYLSNGQFVRNQMENFLREIQLKNDYDEVRTP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +++Q LW++SGHWD Y  NM+  K       D   +ALKPMNCPGH+ +F + L+SY++
Sbjct: 297 LMMNQKLWEESGHWDHYHENMYFTKV------DENDYALKPMNCPGHMLIFKNELRSYKD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFG V+R+E SG+L+GL+RVR F QDDAH+F  K Q+ +E   I  LI  IY  
Sbjct: 351 LPLRMAEFGQVHRHEFSGALNGLLRVRTFCQDDAHIFIMKSQIKSEVEDILKLIDYIYSV 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF   + +LSTRPE  +G   LW++AE  +  VLD +       +   +  G+GAFYGP
Sbjct: 411 FGFTYSI-ELSTRPEDYLGELKLWNEAEQSLANVLDELG------LKYTINEGDGAFYGP 463

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  +KDA+ R  QC T+Q+DF +P +F+  Y+N  +EK  PV++HRA+FGS++RF GI
Sbjct: 464 KIDVHIKDALNRSHQCATVQLDFQMPEKFDLTYINEQNEKERPVVLHRAIFGSLDRFFGI 523

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE+FKG  PLW++P+Q  +  ++ +   Y  ++   L+++++ +  D R+E +  KIRE
Sbjct: 524 LIEHFKGAFPLWMAPVQVNIIGVSDNNTAYVNKVFEALQNNNIRVVIDDRDEKLGKKIRE 583

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
             +KKIP  ++ GD E     +  R++     + + +   I  L +E
Sbjct: 584 SQMKKIPYTLVLGDHEQENNVVSARKYSHEDNELMDIQAFIAQLQEE 630


>gi|305664643|ref|YP_003860930.1| threonyl-tRNA synthetase [Maribacter sp. HTCC2170]
 gi|88707344|gb|EAQ99590.1| threonyl-tRNA synthetase [Maribacter sp. HTCC2170]
          Length = 646

 Score =  641 bits (1652), Expect = 0.0,   Method: Composition-based stats.
 Identities = 261/649 (40%), Positives = 392/649 (60%), Gaps = 19/649 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+T PDG++K +   +T  D+A+SIS  LA+  ++   N  + +   P+  +GS+ + 
Sbjct: 1   MIKITLPDGTVKEYSKGSTAMDIAKSISEGLARNVISAKFNDTIIETVTPIIEDGSLTLF 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
           T  +        HS +HI+A+A++ ++P  ++ IGP IE+GFYYD D  E   S  +   
Sbjct: 61  TWNNDEGKKAFWHSSSHIVAQALEELFPGAKLTIGPAIENGFYYDVDFGEHTVSDKDFPA 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEKK  EI      F  + +S ++A E ++S+K  +KVE++E++     +T      + D
Sbjct: 121 IEKKALEIARGKHDFKMRSVSKQEALEKYKSQKNEFKVELIENL-EDGTITFCDHDTFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG H+ +TG VK   K++ VAGAYWRGD     L+R+YG ++  Q+ELT YL  LEE+
Sbjct: 180 LCRGGHIPNTGIVK-AIKILSVAGAYWRGDEKNKQLTRVYGISFPKQKELTAYLQLLEEA 238

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           +KRDHRKL +E++LF  ++    G+  W  KG  + + L  ++++ + K  YE + TP +
Sbjct: 239 KKRDHRKLGKELELFTFSQKVGQGLPLWLPKGAALRERLEQFLKKAQKKAGYEMVVTPHI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             + L+  SGH+  Y  + F       T KD   F LKPMNCP H  ++N    SYRELP
Sbjct: 299 GQKELYVTSGHYAKYGEDSFQ---PIHTPKDDEEFLLKPMNCPHHCEIYNSRPFSYRELP 355

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
            R AEFG+VYR E SG LHGL RVRGFTQDDAH+FCT +Q+  E   + +L + +    G
Sbjct: 356 KRYAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCTPDQLDQEFKDVIDLSLYVLSSLG 415

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           FE    ++S R    PEK +GS   W+ AEN +      I  + +  ++  V  GE AFY
Sbjct: 416 FENFKAQVSVRDLDTPEKYIGSVENWEKAENAI------INAAKEKGLDFVVESGEAAFY 469

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDA+GR+WQ GTIQVD+NLP RF+  Y  S +E   PVMIHRA FGS+ERF+
Sbjct: 470 GPKLDFMVKDALGRNWQLGTIQVDYNLPERFDLTYKGSDNESHRPVMIHRAPFGSMERFV 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            +++E+  GN PLWL P QAI+  ++    +YA+++ N L+++ +    D RNET+  KI
Sbjct: 530 ALLLEHTGGNFPLWLIPEQAIILPVSEKHEKYAEKVLNSLENNEIRALIDNRNETVGKKI 589

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           RE  + K+P ++I G+ E    +I +RR G      +++   + ++TKE
Sbjct: 590 REAEMGKLPFMLIVGESEEENNTIAVRRHGGEDIGSINVQAFVDLVTKE 638


>gi|307564422|ref|ZP_07626963.1| threonine--tRNA ligase [Prevotella amnii CRIS 21A-A]
 gi|307346782|gb|EFN92078.1| threonine--tRNA ligase [Prevotella amnii CRIS 21A-A]
          Length = 650

 Score =  641 bits (1652), Expect = 0.0,   Method: Composition-based stats.
 Identities = 249/650 (38%), Positives = 392/650 (60%), Gaps = 19/650 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI-EII 62
            +K+TFPDGS++ +    TG  +AESIS +LA+  V+  +NG   +L+ P+ E +I  + 
Sbjct: 1   MVKITFPDGSVREYEQGVTGYQIAESISPALARNVVSCGVNGVTTELNRPINEDAIIALY 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD--FDKEQPFSSDELA 120
             ED        HS AH++AEA++ ++P +Q   GP +E+GF+YD       P S ++  
Sbjct: 61  RFEDEEGKHSFWHSSAHLLAEALKELYPGIQFGFGPALENGFFYDVQTADGTPISENDFP 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IE KM E+  ++SP +++ +S  +A + F++  + YKVE +E       ++ Y QG + 
Sbjct: 121 KIEAKMMELAKKNSPIIRREVSKAEAIKEFKADGQEYKVEHIEKDLEDGTISTYSQGNFT 180

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ STG +K   KL  VAGA+WRGD+    L+RIYG  +  ++ L +YL  LEE
Sbjct: 181 DLCRGPHLVSTGLIK-AVKLTSVAGAFWRGDAKNAQLTRIYGITFPKKKMLDEYLLMLEE 239

Query: 241 SEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++KRDHRK+ +EM+LF  +   G G+  W  KG ++   L   +R+ +   +Y+E+ TP 
Sbjct: 240 AKKRDHRKIGKEMELFMFSDRVGKGLPIWLPKGTQLRLRLQDMLRKLLKPYNYQEVITPG 299

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +  ++L+  SGH+  Y  + F       T ++   + LKPMNCP H  V+ +  +SY++L
Sbjct: 300 IGSKNLYITSGHYAHYGKDAFQ---PIQTPEEDEEYMLKPMNCPHHCEVYAYKPRSYKDL 356

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG+V+R E SG LHGL RVR FTQDDAH+F   +Q+  E     ++I+ ++K F
Sbjct: 357 PLRIAEFGTVFRYEKSGELHGLTRVRNFTQDDAHIFVRPDQVKAEFENNIDIILKVFKTF 416

Query: 419 GFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           GFE    ++S R  +     +G D +W+++E  +K          +  +   V LGE AF
Sbjct: 417 GFENYEAQISLRDPEDKDKYIGDDEVWNESEQAIKQACK------EKGLKATVELGEAAF 470

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK ++++KDAIGR WQ GTIQVD+NLP RF+  Y    + K  PVMIHRA FGS+ERF
Sbjct: 471 YGPKLDFMVKDAIGRRWQLGTIQVDYNLPQRFHLEYTAEDNTKKTPVMIHRAPFGSLERF 530

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             ++IE+  G+ PLWL+P Q  +  ++    +YA+++   L +  +    D RNE +  K
Sbjct: 531 TAVLIEHTAGHFPLWLTPDQVAILPVSEKYNDYARKVKQQLDASDVRALIDDRNEKVGRK 590

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IR++ +K+IP +++ G+KEA+E  + +R+ G      + +   I  +  E
Sbjct: 591 IRDNELKRIPYMVVVGEKEAAEGLVAMRKQGGGEQSTMPVKAFIERVKAE 640


>gi|302380527|ref|ZP_07268992.1| threonine--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
 gi|303234012|ref|ZP_07320661.1| threonine--tRNA ligase [Finegoldia magna BVS033A4]
 gi|302311470|gb|EFK93486.1| threonine--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
 gi|302494937|gb|EFL54694.1| threonine--tRNA ligase [Finegoldia magna BVS033A4]
          Length = 634

 Score =  640 bits (1651), Expect = 0.0,   Method: Composition-based stats.
 Identities = 262/641 (40%), Positives = 391/641 (60%), Gaps = 16/641 (2%)

Query: 6   KLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITP 64
           ++   DGS K F    +  DV +SIS  LA+  V   ++GK+  L + +  +  ++ +  
Sbjct: 3   EVKLKDGSAKEFDGEISLLDVCKSISEGLARDCVGAVVDGKIMGLMETIDSDCEVQFVKF 62

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           +D     V  H+ +H+MA A+Q ++P  + AIGP I+ GFYYD D +  F  ++L +IE 
Sbjct: 63  DDDEGKQVFWHTSSHLMAYAIQRLYPGTKFAIGPSIDSGFYYDLDTDHKFVPEDLEKIEA 122

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
           +M++I+  +   ++  +S ++A E F+++ + YKV+++E+      +TLY  G++ DLCR
Sbjct: 123 EMKKIVKENPKLVRVEISRKEALERFKNEGQDYKVDLIENFDEDATITLYEMGDFVDLCR 182

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPH+     +K F KL+ +AGAYWRGD N  ML RIYG ++  ++ L +YL  +EE++KR
Sbjct: 183 GPHLLDVKNIKAF-KLLSIAGAYWRGDENNKMLQRIYGISFPKKKLLDEYLDRMEEAKKR 241

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQH 303
           DHRK+ +EM LF I E+G G  F+H  G  +   L  +++ ++ +  Y +I TP +L++H
Sbjct: 242 DHRKIGKEMGLFSIQEEGPGFPFFHPNGMVVLNELEKFLKEQLLERGYGQIKTPLILNEH 301

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW QSGHWD Y+ NM+  K       D   +A+KPMNCPG + V+   L SYRELP+++A
Sbjct: 302 LWHQSGHWDHYKENMYFTKI------DGEDYAIKPMNCPGSILVYKDELHSYRELPIKVA 355

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           E G V+R+E SG+LHGL RVR F QDDAHVFC  EQ+ +E  KI +    IY  FGF+  
Sbjct: 356 ELGQVHRHELSGALHGLFRVRTFVQDDAHVFCLPEQIEDEVSKIIDFCDYIYSKFGFKYE 415

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            V+LSTRPE  +GSD  WD A + +K  L+         +   +  G+GAFYGPK ++ L
Sbjct: 416 -VELSTRPEDSMGSDEDWDLAISSLKNALEH------KGLPYKINEGDGAFYGPKIDFHL 468

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +DAIGR WQCGTIQ+DF +P RF+  Y+ S   K  P MIHRA+ GS ERF+GI+IE++ 
Sbjct: 469 EDAIGRTWQCGTIQLDFQMPERFDMTYIASDGSKKRPAMIHRAILGSEERFMGILIEHYA 528

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  PLWLSP+Q  +  I+    +YA E+   +K+  L ++ D R+E I  KIRE  +KK+
Sbjct: 529 GKFPLWLSPVQVEILPISDKFNDYAYELQQKMKARGLRVKVDDRSEKIGLKIRESQLKKV 588

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
              +I G  E     + +R+         +  + I  L  E
Sbjct: 589 NYSLIIGQNEIDNNEVSVRKRDIGDVGSKNTDEFINELVDE 629


>gi|255534998|ref|YP_003095369.1| threonyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10]
 gi|255341194|gb|ACU07307.1| Threonyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10]
          Length = 639

 Score =  640 bits (1651), Expect = 0.0,   Method: Composition-based stats.
 Identities = 262/650 (40%), Positives = 391/650 (60%), Gaps = 21/650 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            IK+T PDG IK F    T  DVA+SIS  LA+  ++  ++G   ++S P+  + +++++
Sbjct: 1   MIKITLPDGGIKEFESGVTPLDVAKSISEGLARNVISALVDGTQTEISSPITADSTLQLL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
           T  D        HS AH++A+A+   +PE ++ IGP IE+GFYYD D  ++  S  +   
Sbjct: 61  TWNDDLGKKAFWHSSAHLLAQAIIEFYPEAKLTIGPAIENGFYYDVDFGDETLSEKDFEN 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEKKM E   ++S F    +S   A +  E     YK E++ ++   E +T      + D
Sbjct: 121 IEKKMLENAKKNSTFQLYPVSKADALK--EYADNPYKTELISNLNDGE-ITFCSHDNFTD 177

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG H+ STG VK   K++  AGAYWRGD     L+R+YG ++  Q++LT+YL  LEE+
Sbjct: 178 LCRGGHIPSTGIVK-AVKILNAAGAYWRGDEKNRQLTRVYGISFPKQKDLTEYLERLEEA 236

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           ++RDHRKL +E+ +F  +E    G+  W  KG  + + L +++   + K  YE + TP +
Sbjct: 237 KRRDHRKLGKELGIFAFSEKVGAGLPLWLPKGAALRKKLENFLSEAQKKAGYEFVMTPHI 296

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             + L+  SGHWD Y A+ F       T  +   F LKPMNCP H  ++  G  SY++LP
Sbjct: 297 GAKELYVTSGHWDKYGADSFQ---PIKTPNEGEEFMLKPMNCPHHCEIYKVGQWSYKDLP 353

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
            R AEFG+VYR E SG LHGL RVRGFTQDDAH+FCT +Q+  E   + +L + ++K  G
Sbjct: 354 KRFAEFGTVYRYEQSGELHGLTRVRGFTQDDAHLFCTPDQLLTEFENVIDLTLYVFKSLG 413

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           FE  + ++S R  +     +GSD  W  AEN +      I+ +++  + T V  GE AFY
Sbjct: 414 FEDFVTQISLRDPENKEKYIGSDENWKKAENAI------IQAAAKKGLKTVVEYGEAAFY 467

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDA+GR WQ GTIQVD+NLP RF+ +Y+ S +EK  PVMIHRA FGS+ERFI
Sbjct: 468 GPKLDFMVKDALGRSWQLGTIQVDYNLPERFDLWYIGSDNEKHRPVMIHRAPFGSMERFI 527

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            I++EN  G+ PLWL+P Q  +  I+    +YA++++ LL++H +    D RNE    KI
Sbjct: 528 AILLENTAGDFPLWLAPDQFTILPISEKYADYAKKVSELLENHDICGLIDDRNEKTGRKI 587

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           R+  IKK+P +++ G+ E    ++ +RR G      +S+ D I    ++S
Sbjct: 588 RDAEIKKLPFMLVVGETEELNGTVSVRRRGEGDLGTMSVEDFIAYFKEQS 637


>gi|194017903|ref|ZP_03056511.1| threonyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
 gi|194010369|gb|EDW19943.1| threonyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
          Length = 642

 Score =  640 bits (1651), Expect = 0.0,   Method: Composition-based stats.
 Identities = 279/637 (43%), Positives = 429/637 (67%), Gaps = 18/637 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
             +K+ FPDG IK F    T +D+A  IS SL KKAVA  IN ++ D+S  +  +  + I
Sbjct: 4   KMVKIQFPDGKIKEFSAGTTVADIASYISPSLRKKAVAGKINEQMVDVSHQLESDARLSI 63

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +T +    L V+RHS AH++A+AV+ ++  V + IGP+IE+GFYYD    Q  S ++LA 
Sbjct: 64  VTLDSKEGLEVLRHSSAHVLAQAVKRLYDNVTLGIGPVIENGFYYDMKLNQTLSVEDLAA 123

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK+M+ II  +    ++ +S+E+A  +     + YK++IL+ +P++E +T+Y+QGE+ D
Sbjct: 124 IEKEMENIINENHHIQRKEISYEEAESM--FAHDPYKLDILKRLPSEEAITVYQQGEFID 181

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ STG VK F KL +VAGAYWRGDS++ +L R+YG A+   ++L  YL+F+EE+
Sbjct: 182 LCRGPHLPSTGFVKSF-KLTRVAGAYWRGDSHQDVLQRVYGVAFQHPKQLANYLHFIEEA 240

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
            KRDHRKL +++ LF  +E+  G+ F+  KG  +   L+++ R  + K  YEE++TP ++
Sbjct: 241 SKRDHRKLGKQLSLFMFSEEAPGMPFYLPKGQIVRNELMAFSREVRNKAQYEEVSTPFMM 300

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +Q LW++SGHWD Y  NM+  +       D  +FALKPMNCPGH+ +F + L SYR+LP+
Sbjct: 301 NQELWEKSGHWDHYHENMYFSEV------DHTSFALKPMNCPGHMLMFKNNLYSYRDLPI 354

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AEFG V+R+E SG+L+GL RVR F QDDAH+F  ++Q+  E  +I  L+  +Y+ FGF
Sbjct: 355 RMAEFGQVHRHEFSGALNGLFRVRTFCQDDAHIFLREDQIEAEIKRIFQLVDHVYRTFGF 414

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           E   V+LSTRPEK +G DA+WD +E+ +K VLD +K      ++  +  G+GAFYGPK +
Sbjct: 415 EYS-VELSTRPEKALGDDAIWDISESALKNVLDRLK------VDYQLNEGDGAFYGPKID 467

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           + +KDA+ R  QC TIQ+DF +P +F+  Y+N  +EK  PV+IH A+FGS++RF GI+IE
Sbjct: 468 FHIKDALQRSHQCATIQLDFQMPEKFDLTYINEKNEKVRPVVIHSAIFGSLDRFFGILIE 527

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +F G  PLWL+P+Q  +  +T+  +++  E+   L+   + +  D R+E + YK+RE  +
Sbjct: 528 HFAGAFPLWLAPVQVQIIPVTTVHLDHCLEVQQQLRKIGIRVTIDERDEKLGYKMREAQM 587

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
           +KIP I + GD E  ++S+ IR+ G   ++++ + D 
Sbjct: 588 QKIPYIAVIGDTEMQDKSLNIRQHGEKASKQLFIEDF 624


>gi|309389087|gb|ADO76967.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Halanaerobium
           praevalens DSM 2228]
          Length = 643

 Score =  640 bits (1651), Expect = 0.0,   Method: Composition-based stats.
 Identities = 278/644 (43%), Positives = 416/644 (64%), Gaps = 17/644 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
             +K+T PDGS++ +    T  DVA SI   L + A+A  +N K  D    +  +  + I
Sbjct: 2   EKVKVTLPDGSVREYEAGVTIKDVAYSIGSGLGRDAIAGIVNEKEVDADFKIEKDVELSI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           IT +   +L +IRH+ +H+MA+AV+ ++  VQVAIGP IEDGFYYDFD E+ F+ + L +
Sbjct: 62  ITIDSQEALEIIRHTASHVMAQAVKRLYDNVQVAIGPAIEDGFYYDFDLEETFNEESLVE 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE +M++II       K+ L  E+A EL +S+ E YK+E+++ +   + ++ Y QG++ D
Sbjct: 122 IEAEMKKIIEEAIKIEKKVLPREEAFELMKSRNEKYKLELIDEL-DDQMISFYFQGDYVD 180

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ STG VK F KL+ VAGAYWRGD N  ML RIYGTA+  +++L +YL  +EE+
Sbjct: 181 LCRGPHLPSTGYVKAF-KLLNVAGAYWRGDENNQMLQRIYGTAFAKEKDLEKYLNRVEEA 239

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVL 300
           +KRDHRKL +E+DLF + ++G G  F+H KG  +   L+ + + +  +  YEEI TP +L
Sbjct: 240 KKRDHRKLGKELDLFSMQDEGRGFPFFHPKGMALRNALVDFWKEEHYQAGYEEIQTPIIL 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D+ LW QSGHWD Y+ NM+  K       D    A+KPMNCPG + V+   + SYRELP+
Sbjct: 300 DESLWHQSGHWDHYQDNMYFTKI------DEEAHAVKPMNCPGGILVYKDSMHSYRELPI 353

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G V+R+E SG+LHGLMRVR FTQDDAH++C   Q+  E   +  L+  IY  FGF
Sbjct: 354 RMAELGLVHRHEMSGALHGLMRVRSFTQDDAHIYCLPSQIETELSGVIKLVDKIYSAFGF 413

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
               V+LST+PEK +G DALW+ A + ++  ++      ++ ++  V  G+GAFYGPK +
Sbjct: 414 NYN-VELSTKPEKAMGDDALWNKATDALQNAIE------KNNLDYEVNAGDGAFYGPKID 466

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           + L+D++GR WQCGTIQ+DF +P RF+  Y+    E+  PVMIHRA++GSIERFIGI+IE
Sbjct: 467 FHLEDSLGRTWQCGTIQLDFQMPERFDLNYIGQDGEEHRPVMIHRAIYGSIERFIGILIE 526

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +F G  P W++P+Q  +  ++   ++YA ++   LK   + +E D R+E + YKIR+  +
Sbjct: 527 HFAGAFPTWMAPVQVEIIPVSDDQIDYAMQVKEELKQEKIRVEVDSRSEKVGYKIRDAQV 586

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K++P ++I G +E    ++ +R          +L +    + +E
Sbjct: 587 KQVPYMLIVGSREEDNGTVSVRDRREGDLGTSNLAEFKENILEE 630


>gi|193211793|ref|YP_001997746.1| threonyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327]
 gi|193085270|gb|ACF10546.1| threonyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327]
          Length = 661

 Score =  640 bits (1650), Expect = 0.0,   Method: Composition-based stats.
 Identities = 251/650 (38%), Positives = 379/650 (58%), Gaps = 16/650 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            + +T PDGS + FP   TG ++A SI   LAK A+   I+G+ CDL  PV  + ++ I+
Sbjct: 14  QVTITLPDGSERTFPFGVTGLEIASSIGNKLAKAALGFTIDGRPCDLDTPVTRDAAVSIV 73

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T + P    +  HS +H+MA A++ ++P  +   GP IE GFYYD   E  F+ D+L  I
Sbjct: 74  TFDSPEGKEIFWHSSSHLMAHAIEELFPGAKFGAGPAIEQGFYYDIACEHRFNEDDLRAI 133

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFE-SKKEAYKVEILES-IPAKENVTLYRQGEWF 180
           E KM EI  R+    ++ +  E+A E F   +K+ YKVEILE  +     V++Y Q  + 
Sbjct: 134 EAKMLEISQRNLSITREEMPREQAIEYFANERKDPYKVEILEDTLKEVPTVSVYYQDGFA 193

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLC GPH+ STG+VK    L  ++ +YWRGDS+R  + RIYG  + + + L +++  +EE
Sbjct: 194 DLCSGPHLPSTGKVK-AVLLTNISSSYWRGDSSRETMQRIYGITFPSDKLLKEHVARMEE 252

Query: 241 SEKRDHRKLAREMDLFH-IAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQ 298
           + KRDHRKL  E+ LF    E GSG+  W   G  I   L ++++  + K  Y  + TP 
Sbjct: 253 ARKRDHRKLGAELGLFMLTPEVGSGLPIWLPNGAIIRNELETFLKAEQRKRGYVPVYTPH 312

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           + +  L+++SGH+  Y  + F      D       + LKPMNCP H  +++  L+SYR+L
Sbjct: 313 IGNIELYKRSGHYPYYSDSQFPPLTYKDETGREEQYLLKPMNCPHHHLIYSQTLRSYRDL 372

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RL EFG+VYR+E SG L+GL+R RGFTQDD+H++C  +Q+ +E     +L   ++   
Sbjct: 373 PIRLTEFGTVYRHEQSGELNGLVRARGFTQDDSHIYCRPDQLVDEICNAIDLTRFVFNTL 432

Query: 419 GFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           GF+ +  +LS    +      G+  +W+ AE  +K   D +       I   + +GE +F
Sbjct: 433 GFDDVETRLSLHDPENQSKYGGTAEVWEQAEKDVKEAADRMG------IKYFIGIGEASF 486

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK ++I++DAIGR WQ GT+QVD+ +P RF+  Y+ S  +K  PV+IHRA FGS+ERF
Sbjct: 487 YGPKIDFIVRDAIGRKWQLGTVQVDYVMPERFDLSYIGSDGQKHRPVVIHRAPFGSMERF 546

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
           IG++IE+  GN PLWL+P+Q  V  I     +YA+E+   L +  +  E D R+E I  K
Sbjct: 547 IGVLIEHTAGNFPLWLAPVQVAVLPIAEDVHDYAREVYAKLHAAGIRAELDLRSEKIGKK 606

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IRE  + KIP ++I G  E  +  + +RR          + + I  L +E
Sbjct: 607 IREAEVSKIPAMLIIGRNEQEKGEVSLRRHRKGDEGSFGVDELIARLREE 656


>gi|218259669|ref|ZP_03475318.1| hypothetical protein PRABACTJOHN_00977 [Parabacteroides johnsonii
           DSM 18315]
 gi|218224962|gb|EEC97612.1| hypothetical protein PRABACTJOHN_00977 [Parabacteroides johnsonii
           DSM 18315]
          Length = 651

 Score =  640 bits (1650), Expect = 0.0,   Method: Composition-based stats.
 Identities = 258/649 (39%), Positives = 392/649 (60%), Gaps = 19/649 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+TFPD S+K +    T   +AESIS  LA++ +A ++NG++ DL+ P+ ++ +I++ 
Sbjct: 1   MIKITFPDNSVKEYAEGTTAMQIAESISSRLAQEVLAASVNGEIWDLTRPINQDAAIKLF 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
             ED        HS AH+MAEA+Q ++P ++  IGP IE+GFYYD D  +      +   
Sbjct: 61  KWEDEEGKHAFWHSSAHLMAEALQELYPGIKFGIGPAIENGFYYDVDPGDAVIKEGDFPA 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE KM E++A+     +Q +S   A ++F  + E YK E++  +     +T Y QG + D
Sbjct: 121 IEAKMLELVAKKEEIKRQDISKADAMKMFGDRGEVYKTELISEL-EDGKITTYTQGSFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ +T  +K   K+M VAGAYWRGD  R  L R+YG  +  ++ L +YL  +EE+
Sbjct: 180 LCRGPHLPNTSYLK-AVKIMSVAGAYWRGDEKRKQLVRLYGITFPKKKMLDEYLALMEEA 238

Query: 242 EKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           +KRDHRK+ +E++LF  +   G+G+  W  +G ++   L  +++R + K  Y+++ TP +
Sbjct: 239 KKRDHRKIGKELELFTFSTAVGAGLPLWLPRGTQLRLKLEDFLKRIQKKYGYQQVMTPHI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             + L+  SGH+  Y  + F       T ++   F LKPMNCP H  +F    +SY++LP
Sbjct: 299 GGKQLYVTSGHYAKYGKDSFQ---PIHTPQEGEEFLLKPMNCPHHCEIFKSFPRSYKDLP 355

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R AEFG+VYR E SG LHGL RVRGFTQDDAH+FC  +Q+ +E LK+ ++I  I+K   
Sbjct: 356 LRFAEFGTVYRYEQSGELHGLTRVRGFTQDDAHLFCRPDQLKDEFLKVMDIIFIIFKALD 415

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           FE    ++S R     +K +GS+  W+ AE+ +      I+   +  +   +  GE AFY
Sbjct: 416 FENFEAQISLRDKVNRDKYIGSEENWEKAESAI------IEACQEKGLKAKIEYGEAAFY 469

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDAIGR WQ GTIQVD+NLP RF   Y    ++K  PVMIHRA FGS+ERF+
Sbjct: 470 GPKLDFMVKDAIGRRWQLGTIQVDYNLPERFELEYTGEDNKKHRPVMIHRAPFGSMERFV 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE+  G  PLWL+P Q  +  I+    +YA E+   L++  LS+  D RNE I  KI
Sbjct: 530 AVLIEHTGGKFPLWLTPDQVSILPISEKFNDYAYEVKRQLEAEDLSVLVDDRNEKIGRKI 589

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R+  +K+IP ++I G+KEA    + +R+ G      + +     +L  E
Sbjct: 590 RDTELKRIPYMLIVGEKEAENNEVSVRKQGEGDKGSMKIATFAALLKGE 638


>gi|229916382|ref|YP_002885028.1| threonyl-tRNA synthetase [Exiguobacterium sp. AT1b]
 gi|259516484|sp|C4L461|SYT_EXISA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|229467811|gb|ACQ69583.1| threonyl-tRNA synthetase [Exiguobacterium sp. AT1b]
          Length = 647

 Score =  639 bits (1649), Expect = 0.0,   Method: Composition-based stats.
 Identities = 260/651 (39%), Positives = 403/651 (61%), Gaps = 22/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            I+LTFPDG++K F    T  DVA SIS  L KKA+A  ++G++ D   P+  +G IE++
Sbjct: 3   MIQLTFPDGAVKEFEAGVTAEDVAGSISPGLRKKAIAAKLDGELIDYRRPIEHDGKIELV 62

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPE---VQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            P+    L ++RHS AH+MA+A++ ++ E   + + IGP IE+GFYYD + ++  + ++L
Sbjct: 63  MPDSEDGLDLMRHSSAHLMAQAIKRLYGEDNNIYLGIGPTIENGFYYDIEMDRRINEEDL 122

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IEK M+ I+  +    ++ +S ++A   ++   +  K+E++E IPA + +T+Y QGE+
Sbjct: 123 PEIEKMMKRIVDENLEITREVVSRDEALARYKELGDPLKIELIEDIPADQTLTIYHQGEF 182

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPHV ST ++K F KLM VAGAYWRGDS+  ML RIYGTAW T+++L ++L  LE
Sbjct: 183 FDLCRGPHVPSTSKLKIF-KLMSVAGAYWRGDSDNKMLQRIYGTAWATKEQLAEHLRLLE 241

Query: 240 ESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTP 297
           E+++RDHRKL +E+DLF ++++   G+  W  KG  I +T+  Y+  ++++  Y+ + TP
Sbjct: 242 EAKERDHRKLGKELDLFFVSQEVGQGLPMWLPKGASIRRTVERYIVDKELELGYQHVYTP 301

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    L++ SGHWD Y+ +MF     D+         L+PMNCP H+ ++ H  +SYRE
Sbjct: 302 VLGSVDLYKTSGHWDHYQDDMFPKMEMDN-----EELVLRPMNCPHHMTIYKHEPRSYRE 356

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AE G ++R E SG+L GL RVR    +D H F T EQM  E   I +LI  +Y D
Sbjct: 357 LPLRIAELGGMHRYEMSGALTGLQRVRYMVLNDGHTFVTPEQMKQEFKDIVHLIQEVYAD 416

Query: 418 FGFEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           FG +    +LS R      K   +DA+W+ A++ +K  +D ++      +      GE A
Sbjct: 417 FGIKDYRFRLSYRDPADKEKYFDNDAIWEMAQSQLKETMDELE------LPYFEAEGEAA 470

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  ++ A+G++    T+Q+DF LP RF+  Y     +   P+++HR V  ++ER
Sbjct: 471 FYGPKLDVQVRTALGKEETLSTVQLDFLLPERFDLTYTGPDGKDHRPIVLHRGVVSTMER 530

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           F+  +IE +KG  P WL+P+Q  +  ++    EY  E+   L    + +ETD R+E + Y
Sbjct: 531 FVAYLIEEYKGAFPTWLAPVQVKLIPVSHVHDEYVAEVKAELVKRGVRVETDLRDEKLGY 590

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIRE  +KKIP+ ++ GDKE  ER++ IRR+G       SL + I  LT E
Sbjct: 591 KIREAQMKKIPMTLVLGDKERDERAVNIRRYGQQEQVSASLDEFIASLTDE 641


>gi|169824388|ref|YP_001691999.1| threonyl-tRNA synthetase [Finegoldia magna ATCC 29328]
 gi|238687735|sp|B0S169|SYT_FINM2 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|167831193|dbj|BAG08109.1| threonyl-tRNA synthetase [Finegoldia magna ATCC 29328]
          Length = 634

 Score =  639 bits (1649), Expect = 0.0,   Method: Composition-based stats.
 Identities = 261/641 (40%), Positives = 389/641 (60%), Gaps = 16/641 (2%)

Query: 6   KLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITP 64
           ++   DGS K F    +  DV +SIS  LA+  V   ++GK+  L + +  +  ++ +  
Sbjct: 3   EVKLKDGSAKEFDGEISLLDVCKSISEGLARDCVGAVVDGKIMGLMETIDSDCEVQFVKF 62

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           +D     V  H+ +H+MA A+Q ++P  + AIGP I+ GFYYD D +  F  ++L +IE 
Sbjct: 63  DDDEGKQVFWHTSSHLMAYAIQRLYPGTKFAIGPSIDSGFYYDLDTDHKFVPEDLEKIEA 122

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
           +M++I+  +   ++  +S ++A E F+++ + YKV+++E+      +TLY  G++ DLCR
Sbjct: 123 EMKKIVKENPKLVRVEISRKEALERFKNEGQDYKVDLIENFDEDATITLYEMGDFVDLCR 182

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPH+     +K F KL+ +AGAYWRGD N  ML RIYG ++  ++ L +YL  +EE++KR
Sbjct: 183 GPHLLDVKNIKAF-KLLSIAGAYWRGDENNKMLQRIYGISFPKKKLLDEYLDRMEEAKKR 241

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQH 303
           DHRK+ +EM LF I E+G G  F+H  G  +   L  +++ ++ +  Y +I TP +L++H
Sbjct: 242 DHRKIGKEMGLFSIQEEGPGFPFFHPNGMVVLNELEKFLKEQLLERGYGQIKTPLILNEH 301

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW QSGHWD Y+ NM+  K       D   +A+KPMNCPG + V+   L SYRELP+++A
Sbjct: 302 LWHQSGHWDHYKENMYFTKI------DGEDYAIKPMNCPGSILVYKDELHSYRELPIKVA 355

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           E G V+R+E SG+LHGL RVR F QDDAHVFC  EQ+  E  K  +    IY  FGF+  
Sbjct: 356 ELGQVHRHELSGALHGLFRVRTFVQDDAHVFCLPEQIEEEVSKTIDFCDYIYSKFGFKYE 415

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            V+LSTRPE  +GSD  WD A + +K  L+         +   +  G+GAFYGPK ++ L
Sbjct: 416 -VELSTRPEDSMGSDEDWDLAISSLKNALEH------KGLPYKINEGDGAFYGPKIDFHL 468

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +DAIGR WQCGTIQ+DF +P RF+  Y+ S   K  P MIHRA+ GS ERF+GI+IE++ 
Sbjct: 469 EDAIGRTWQCGTIQLDFQMPERFDMTYIASDGSKKRPAMIHRAILGSEERFMGILIEHYA 528

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  PLWLSP+Q  +  I+    +YA E+   +K+  L ++ D R+E I  KIRE  +KK+
Sbjct: 529 GKFPLWLSPVQVEILPISDKFNDYAYELQQKMKARGLRVKVDDRSEKIGLKIRESQLKKV 588

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
              +I G  E     + +R+         +  + I  L  E
Sbjct: 589 NYSLIIGQNEIDNNEVSVRKRDIGDVGSKNTDEFINELVDE 629


>gi|319790149|ref|YP_004151782.1| threonyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
 gi|317114651|gb|ADU97141.1| threonyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
          Length = 658

 Score =  639 bits (1649), Expect = 0.0,   Method: Composition-based stats.
 Identities = 272/663 (41%), Positives = 417/663 (62%), Gaps = 32/663 (4%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEII 62
            + +  PDGS   F    T  ++A  I++SL K AV    NG++ D+  P+ E G I II
Sbjct: 1   MVVIELPDGSKLEFQGPTTVKEIAGKIAKSLEKNAVGAVFNGELIDVHTPITESGRIRII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWP--EVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           TP+DP SL ++RHS AH++A+AV+ ++   EV++ IGP  ++GFYYDFD     S ++L 
Sbjct: 61  TPKDPESLEILRHSAAHLLAKAVKKLYGNNEVKLGIGPATQEGFYYDFDLPVSISEEDLP 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG-EW 179
           +IE +M++I+    PF ++ +S EKARELF+   + YK+++LESIP +E V++Y  G ++
Sbjct: 121 KIEAEMEKIVKAKEPFRREVISREKARELFK--NDPYKLKLLESIPEEEEVSIYWLGEDF 178

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLC+GPHV   GQ+K F KL+ VAGAYWRGDS   ML RIYGTA+  ++EL ++L+ LE
Sbjct: 179 FDLCKGPHVEHAGQIKAF-KLLSVAGAYWRGDSRNKMLQRIYGTAFWKKKELEEFLHRLE 237

Query: 240 ESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
           E++KRDHR L +++DLF I E+ G G++FWH  G  I Q +  ++  + +   Y+ I TP
Sbjct: 238 EAKKRDHRVLGKQLDLFGIYEEAGPGLVFWHPNGAIIRQEIEQWVEEEHRKRGYQRIYTP 297

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL----------------RTFALKPMNC 341
            ++   LW++SGH++ YR NMF V   +   ++                   +A+KPMNC
Sbjct: 298 HIMKADLWKRSGHYNFYRENMFFVPVVEHDEEERLGNDEVPLTCSEIEKAHWYAVKPMNC 357

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
           PGH+ ++   ++SYR+LP+R  EFG+VYR E SGSLHGL+RVRGFTQDD H+FC  +Q+ 
Sbjct: 358 PGHILIYKSQVRSYRDLPIRFFEFGTVYRYEKSGSLHGLLRVRGFTQDDGHIFCRPDQLK 417

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E   + + I+ +   F  + ++  + TRPEK +G++  W+ A N +   L       + 
Sbjct: 418 EEIQGVMDYIMDLLSTFKLDYVIN-VGTRPEKFIGTEEAWEHATNALIEALK------ER 470

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
                ++ G+GAFYGPK +  + DAIGR W   TIQVDFNLP RF+  YV+   +K  PV
Sbjct: 471 GFEYNIVEGDGAFYGPKIDIAVLDAIGRKWDGPTIQVDFNLPERFDLTYVDRDGQKKRPV 530

Query: 522 MIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLS 581
           M+HRA+ GSIERFIG++IE++ G  P WL+P+QA++  ++   ++YA E+   LK   + 
Sbjct: 531 MVHRAIMGSIERFIGLLIEHYAGLFPTWLAPVQAVIIPVSDKYLDYADEVYAKLKEAGIR 590

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           ++ D  +  + YKIR+   +KIP ++I G++E   +++ +R        ++ L   +  +
Sbjct: 591 VKLDDESAKVGYKIRKAETQKIPYMLIVGEREKENQTVSVRSKREGDLGEMELQQFLDKI 650

Query: 642 TKE 644
             E
Sbjct: 651 LTE 653


>gi|148269334|ref|YP_001243794.1| threonyl-tRNA synthetase [Thermotoga petrophila RKU-1]
 gi|166225512|sp|A5IJ45|SYT_THEP1 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|147734878|gb|ABQ46218.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Thermotoga
           petrophila RKU-1]
          Length = 640

 Score =  639 bits (1649), Expect = 0.0,   Method: Composition-based stats.
 Identities = 276/649 (42%), Positives = 407/649 (62%), Gaps = 26/649 (4%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            IK+  PDG  K +    T +++A+ +     KKA+   +NG++ DL  P+  +  + ++
Sbjct: 2   KIKVKLPDGKEKEYDRGITPAEIAKELG---VKKAIGAVVNGELWDLKRPIENDCELRLV 58

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWP--EVQVAIGPIIEDGFYYDFD-KEQPFSSDEL 119
           T EDP +    RH+ AHI+A+AV  I+    V++ IGP IE+GFYYDFD K    + ++L
Sbjct: 59  TLEDPEAPEFYRHTMAHILAQAVMRIYGKENVKLGIGPTIENGFYYDFDIKNGKLTEEDL 118

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IE++M++II  + P  ++ +S E+AR+L     + YK+E++E I   + VT+YRQGE+
Sbjct: 119 PKIEQEMKKIIKENLPIERKEISKEEARKL--FNNQPYKLELIEEI-EGDRVTIYRQGEF 175

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPH+ STG VK F KL+ V+GAYWRG    PML+R+YGTA+  +++L  YL FLE
Sbjct: 176 VDLCRGPHLPSTGVVKHF-KLLSVSGAYWRGSEKNPMLTRVYGTAFAKKEDLDNYLKFLE 234

Query: 240 ESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTP 297
           E+++RDHRKL   ++LF +  +   G+ F+  KG  +   L+ + R    +  Y+EI TP
Sbjct: 235 EAQRRDHRKLGPHLELFMLNTEYAPGMPFFLPKGVVVLNELMRFSRELHRERGYQEIFTP 294

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++++ LW+ SGHWD Y  NM+ ++      KD   +A+KPMNCPGH+ V+     SYR+
Sbjct: 295 LIMNEQLWKISGHWDHYAENMYFIE------KDEERYAVKPMNCPGHILVYKSRTVSYRD 348

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R  EFG V+R E SG LHGLMRVR FTQDDAH+FCT +Q+  E L + +LI +IY  
Sbjct: 349 LPLRFFEFGRVHRYERSGVLHGLMRVRSFTQDDAHIFCTPDQIEEEILGVLDLINTIYGQ 408

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF    V+LST PE  +G +A+W+ A   +K  L+         ++  V  GEGAFYGP
Sbjct: 409 FGFTY-RVELSTMPEDHMGDEAIWEKATTALKNALERAG------LSYKVNEGEGAFYGP 461

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K ++ ++D+IGR+WQC TIQ+DF +P +FN  Y+   +++   VMIHRA++GS+ERF GI
Sbjct: 462 KIDFHIRDSIGREWQCATIQLDFMMPEKFNVTYIGPDNKEHRAVMIHRAIYGSLERFFGI 521

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE+F G  P WL+PIQ  V  I+    + A++IA  +      +  D R ET+ Y+IR+
Sbjct: 522 LIEHFAGAFPTWLAPIQVAVIPISEKHNDGAEKIAKRISQEGFRVFFDNRRETLGYRIRQ 581

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
              +KIP +II GDKE     I +R       + V L   +  L  E L
Sbjct: 582 AQTQKIPYMIILGDKELESGKISVRTRTGKEIKDVDLEHFVETLRNEVL 630


>gi|313891921|ref|ZP_07825522.1| threonine--tRNA ligase [Dialister microaerophilus UPII 345-E]
 gi|329121028|ref|ZP_08249659.1| threonine--tRNA ligase [Dialister micraerophilus DSM 19965]
 gi|313119564|gb|EFR42755.1| threonine--tRNA ligase [Dialister microaerophilus UPII 345-E]
 gi|327471190|gb|EGF16644.1| threonine--tRNA ligase [Dialister micraerophilus DSM 19965]
          Length = 634

 Score =  639 bits (1649), Expect = 0.0,   Method: Composition-based stats.
 Identities = 271/640 (42%), Positives = 407/640 (63%), Gaps = 16/640 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEII 62
            I +   DGS  +F    T  +VA+ ISRSLAK+A+   ++G V DL + +++G+ IE  
Sbjct: 1   MITIELKDGSKLSFEEPITLFEVAKKISRSLAKEALVAKVDGNVTDLRNLIKDGTKIEFC 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T  DP  LA +RH+ AH+MA+A+Q ++P  + AIGP I  GFYYD + E  F  ++   I
Sbjct: 61  TKNDPEGLAALRHTAAHVMAQAIQHLYPGTKFAIGPAISTGFYYDIESEHVFKQEDFPAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M +II ++    K+ +S ++A + F++K++ YK+ ++  +P    +++Y QG++ DL
Sbjct: 121 EKEMSKIIKQNLHLDKKVVSRKEALDFFKNKEQDYKILLINDMPEDTELSIYTQGDYDDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRG HV +TG++K F KL+ VAGAYWRGD N  ML RIYGTA+  +++L  +L+   E+E
Sbjct: 181 CRGGHVDNTGKIKAF-KLLSVAGAYWRGDENNVMLQRIYGTAFFNKEDLEHFLFVRSEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD 301
           KRDHRKL +++DLF   E+G G  F+H KG  I   LI Y R   +   YEEI TP +L 
Sbjct: 240 KRDHRKLGKQLDLFSFHEEGPGFPFFHPKGMVIRNLLIDYERELFRKYGYEEIVTPIILS 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           ++LW QSGHWD YR NM+  K       D   +A+KPMNCPG +  F    +SYR+LP R
Sbjct: 300 KNLWLQSGHWDHYRENMYFTKI------DNEDYAVKPMNCPGGILYFKTQQRSYRDLPKR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           + EFG V+R+E  G+LHGL RVR FTQDDAH+F T + M +E + + N+   +Y  FG +
Sbjct: 354 VGEFGLVHRHELHGALHGLFRVRNFTQDDAHIFMTPKDMESEVISVVNMFKELYDVFGLK 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
             + +LSTRPE  +GSD LW+ A N ++  +++        ++  +  G+GAFYGPK ++
Sbjct: 414 YHI-ELSTRPENSMGSDELWEIATNALRNAIESTN------VSYRINEGDGAFYGPKLDF 466

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            ++D++GR WQCGTIQ+D  LP RF+  YV    EK   VMIHRA +GS+ERFIGI+IE+
Sbjct: 467 HIEDSLGRTWQCGTIQMDMQLPERFDVTYVGEDGEKHRAVMIHRAGYGSLERFIGILIEH 526

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  P W +P+Q  +  ++ +   YAQE+   +    + +E D  N+T+ YKIR+  ++
Sbjct: 527 YAGAFPTWCAPVQVKIIPVSENYHNYAQEVYKKMFEQGIRVEIDKGNDTLGYKIRKAQME 586

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           KIP +++ G+KE++  +I +R         V +   I ++
Sbjct: 587 KIPYMVVVGEKESNSGNISVRSREKGDEGTVDINKFIELI 626


>gi|146319020|ref|YP_001198732.1| threonyl-tRNA synthetase [Streptococcus suis 05ZYH33]
 gi|146321228|ref|YP_001200939.1| threonyl-tRNA synthetase [Streptococcus suis 98HAH33]
 gi|253752085|ref|YP_003025226.1| threonyl-tRNA synthetase [Streptococcus suis SC84]
 gi|253753910|ref|YP_003027051.1| threonyl-tRNA synthetase [Streptococcus suis P1/7]
 gi|166225507|sp|A4W2F0|SYT_STRS2 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|166225509|sp|A4VW43|SYT_STRSY RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|145689826|gb|ABP90332.1| Threonyl-tRNA synthetase [Streptococcus suis 05ZYH33]
 gi|145692034|gb|ABP92539.1| Threonyl-tRNA synthetase [Streptococcus suis 98HAH33]
 gi|251816374|emb|CAZ52005.1| threonyl-tRNA synthetase [Streptococcus suis SC84]
 gi|251820156|emb|CAR46495.1| threonyl-tRNA synthetase [Streptococcus suis P1/7]
 gi|292558668|gb|ADE31669.1| Threonyl-tRNA synthetase [Streptococcus suis GZ1]
 gi|319758452|gb|ADV70394.1| threonyl-tRNA synthetase [Streptococcus suis JS14]
          Length = 650

 Score =  639 bits (1649), Expect = 0.0,   Method: Composition-based stats.
 Identities = 257/651 (39%), Positives = 405/651 (62%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+TFPDG+++ +    T  ++AESIS+SLAKKA+A   NGK+ D +  +  +G++EI+
Sbjct: 1   MIKITFPDGAVREYQAGVTTFEIAESISKSLAKKALAGKFNGKLIDTTRAIDEDGTLEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQ 121
            P+   +L ++RHS AH+ A+A + ++P++++ +GP I+DGFYYD D      S+++L +
Sbjct: 61  MPDHDDALDILRHSAAHLFAQAARRLFPDIKLGVGPAIQDGFYYDTDNAAGQISNEDLPR 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWF 180
           I+++M +I+  + P  ++ ++ E+A E+F+   + YK+E++      E  +T+Y QGE+ 
Sbjct: 121 IQEEMMKIVKENFPSERREVTKEEALEIFK--NDPYKLELIHEHSDDEGGLTIYTQGEYV 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV STG+++ F +L+ VAGAYWRG S  PM+ R+YGTAW  +++L  YL   EE
Sbjct: 179 DLCRGPHVPSTGRIQIF-ELLNVAGAYWRGKSENPMMQRVYGTAWFDKKDLKAYLQMREE 237

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           +++RDHRKL +E+DLF I+++   G+ FW   G  I +TL  Y+  +++   Y+ + TP 
Sbjct: 238 AKERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRTLERYITDKELASGYQHVYTPP 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L++ SGHW+ Y  +MF          D   F L+PMNCP H+ V+ + ++SYREL
Sbjct: 298 LASVELYKTSGHWEHYSEDMFPTMDMG----DGEEFVLRPMNCPHHIQVYKNHVRSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           PVR+AE G ++R E SG+L GL RVR  T +D H+F T EQ+  E  K   LII +Y DF
Sbjct: 354 PVRIAELGMMHRYEKSGALTGLQRVREMTLNDGHIFVTPEQIQEEFKKALQLIIDVYADF 413

Query: 419 GFEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
                  +LS R      K   +D +W++A+ ++KG +D +       ++     GE AF
Sbjct: 414 NLNDYRFRLSYRDPEDKEKYYDNDEMWENAQRMLKGAMDEMG------VDYFEAEGEAAF 467

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K A+G +    TIQ+DF LP RF   Y+ +  E+  PVMIHR V  ++ERF
Sbjct: 468 YGPKLDIQVKTALGNEETLSTIQLDFLLPERFGLTYIGADGEEHRPVMIHRGVISTMERF 527

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
             I+IE +KG  P WL+P Q  +  I+  + ++YA ++A  L+   + +  D RNE + Y
Sbjct: 528 TAILIETYKGAFPTWLAPTQVTMIPISVEAHLDYAWKVAKELQDRGVRVHVDERNEKMQY 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR+    KIP  +I GDKE  + ++ +RR+GS  TQ  S+ + +  +  +
Sbjct: 588 KIRQSQTSKIPYQLIVGDKEMEDNAVNVRRYGSKATQTQSVSEFVDHILAD 638


>gi|297569216|ref|YP_003690560.1| threonyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
 gi|296925131|gb|ADH85941.1| threonyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
          Length = 646

 Score =  639 bits (1648), Expect = 0.0,   Method: Composition-based stats.
 Identities = 279/647 (43%), Positives = 407/647 (62%), Gaps = 19/647 (2%)

Query: 6   KLTFPDGSI-KNFPVHATGSDVAES-ISRSLAKKAVAVAINGKVCDLSDPVREG-SIEII 62
           ++T  +    +NFP   T +   +   S  + K+A+A+ +  ++ DL+ P+  G  + +I
Sbjct: 3   EITLTNAEQSRNFPAGTTAAQALKEMFSNKVRKRALALQVGDRLVDLAAPLNSGGEVAVI 62

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWP-EVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           TPE P +L ++RHS AH+MAEAV  ++  EVQV IGP   DGFYYDFD++QPF+  +L +
Sbjct: 63  TPESPEALEILRHSAAHVMAEAVLELYGDEVQVTIGPATADGFYYDFDRQQPFTPADLEK 122

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE  M EI   D PF ++ +S  +A E F  + + YK+E+L+ I   + V+LY QG + D
Sbjct: 123 IEALMAEIATADRPFERREVSRAEALEFFRQQGQNYKLELLDEI-EDDQVSLYSQGNFVD 181

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ STG +K F KL ++AGAYWRGD N  ML RIYGTA+  ++EL  YL  LEE+
Sbjct: 182 LCRGPHLPSTGWLKAF-KLTRLAGAYWRGDENNRMLQRIYGTAFFDKKELRAYLERLEEA 240

Query: 242 EKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQV 299
           +KRDHRKL +E++LF I  + G G+I W  KG  + + +  Y R    +  YE ++TP +
Sbjct: 241 KKRDHRKLGKELELFTIQDQIGPGLILWQPKGALLRRLIEDYWRDEHYRHGYELLSTPHI 300

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             + LWQ SGH D Y  NM++    ++       + LKPMNCP H+A++    +SYRE P
Sbjct: 301 ARRELWQTSGHLDFYGENMYSPMEVEEV-----QYQLKPMNCPFHIAIYKTRKRSYREFP 355

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R  E G+VYR E +G+LHGLMRVRGFTQDDAH+FC  + +  E  +I +L + I + FG
Sbjct: 356 LRWCELGTVYRFEKTGALHGLMRVRGFTQDDAHIFCRPDHLEEEIFRILDLNLHILQAFG 415

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F    + LSTRPEK VGSD  WD +   ++  L+      +  ++  +  GEG FYGPK 
Sbjct: 416 FADYDIYLSTRPEKYVGSDENWDRSTAALQAALE------KKGLSYSLDPGEGVFYGPKI 469

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +  +KD +GR WQC TIQVDFNLP RF   Y      +  P+MIHRA+ GS+ERF G++I
Sbjct: 470 DIKIKDVLGRAWQCSTIQVDFNLPERFELGYTGEDGREHRPIMIHRALMGSLERFFGVLI 529

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E++ G  PLWL+P+QA +  IT + ++Y +E+   L+   + +E D RNE +NYKIRE  
Sbjct: 530 EHYAGAFPLWLAPVQARICNITDAQLDYGEEVYAALRRAGVRVEKDLRNEKLNYKIREAQ 589

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           ++KIP ++I GDKEA+E ++ +R+        + + +   ++  E  
Sbjct: 590 LQKIPYMLIVGDKEAAEGTVTVRQRDGKNLPPMPVSEFAALVAAEVT 636


>gi|332292754|ref|YP_004431363.1| threonyl-tRNA synthetase [Krokinobacter diaphorus 4H-3-7-5]
 gi|332170840|gb|AEE20095.1| threonyl-tRNA synthetase [Krokinobacter diaphorus 4H-3-7-5]
          Length = 648

 Score =  639 bits (1648), Expect = 0.0,   Method: Composition-based stats.
 Identities = 260/649 (40%), Positives = 394/649 (60%), Gaps = 19/649 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +T PDG++K     AT  DVA+SIS  LA+  ++   NG+  + S P+  +GSI + 
Sbjct: 1   MINITLPDGNVKQMDKGATPMDVAKSISEGLARNVISAKFNGQTVETSTPLTEDGSITLF 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
           T  D       RHS +H++A+A+  ++P  ++ IGP IE+GFYYD D  +Q  S  +   
Sbjct: 61  TWNDDEGKTAFRHSSSHVLAQAILKLYPGAKLTIGPAIENGFYYDVDLGDQTISDKDFKS 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE KM EI      F  + ++ ++A + ++++   +KVE++E++     +T     ++ D
Sbjct: 121 IEDKMLEIARGKHDFSLRSVTKQEALDKYKAEGNEFKVELIENL-EDGTITFCDHDDFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG H+ +TG +K   K+M VAGAYWRGD N+P L+R+YGT++  Q++L +YL  +EE+
Sbjct: 180 LCRGGHIPNTGIIK-AVKIMSVAGAYWRGDENKPQLTRVYGTSFPKQKDLKEYLELIEEA 238

Query: 242 EKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           +KRDHRKL +E++LF      G G+  W  KG  + + L ++++  + K  YE + +P +
Sbjct: 239 KKRDHRKLGKELELFTFSQRVGQGLPLWLPKGAALRERLENFLKAAQKKQGYEMVVSPHI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             + L++ SGH++ Y A+ F       T  +   F LKPMNCP H  ++N    SY+ELP
Sbjct: 299 GQKELYETSGHYEKYGADSFQPIL---TPNEGEEFLLKPMNCPHHCEIYNSRPWSYKELP 355

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
            R AEFG+VYR E SG LHGL RVRGFTQDDAH+FCT +Q+  E +K+ +L++ ++   G
Sbjct: 356 KRFAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCTPDQLDEEFMKVIDLVLYVFGSLG 415

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           FE    ++S R  +     +G+D  W  AEN +              +N  V  GE AFY
Sbjct: 416 FENFTAQVSLRDPEKPEKYIGADENWVKAENAILNAAKA------KGLNYVVETGEAAFY 469

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDA+GR WQ GTIQVD+NLP RF   Y  S +E   PVMIHRA FGS+ERFI
Sbjct: 470 GPKLDFMVKDALGRSWQLGTIQVDYNLPERFELQYKGSDNEMHRPVMIHRAPFGSMERFI 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            I++E+  GN PLWL P QA + T++    +YAQ +  LL++H +    D R ET+  KI
Sbjct: 530 AILLEHTGGNFPLWLMPQQATILTLSEKYEKYAQNVLTLLENHEIRAIIDNRGETMGKKI 589

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           RE  ++K+P +II G++E ++ +I +RR G      +++     ++  E
Sbjct: 590 REAEMQKLPFMIIIGEQEENDGTISVRRHGGEDLGSMTIDAFAKMVNAE 638


>gi|225630645|ref|YP_002727436.1| threonyl-tRNA synthetase [Wolbachia sp. wRi]
 gi|254783546|sp|C0R403|SYT_WOLWR RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|225592626|gb|ACN95645.1| threonyl-tRNA synthetase [Wolbachia sp. wRi]
          Length = 633

 Score =  639 bits (1648), Expect = 0.0,   Method: Composition-based stats.
 Identities = 312/643 (48%), Positives = 438/643 (68%), Gaps = 18/643 (2%)

Query: 4   DIKLTF-PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
            I++TF  +  +K +    TG D+ +     + K+A+A  +NG++ DLS  +  +  IE+
Sbjct: 1   MIRITFSAEQKVKEYSGKVTGFDILQ---PDVLKEAIAFKVNGELHDLSREIEADAEIEV 57

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           I   D   L +IRH  AHIMA+AV+ ++P  Q+ IGP I+DGFYYDF   + F++D+L  
Sbjct: 58  IQLSDEAGLDIIRHDAAHIMAQAVKELFPNTQITIGPTIQDGFYYDFATGRTFTTDDLTA 117

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEKKM+EI+  +  F+++  + ++A + F    E YKV+I+ SIP  EN+T+YRQG++ D
Sbjct: 118 IEKKMKEIVKSNHRFVREVWTRKQAIDFFSDIGEKYKVDIISSIPEGENLTVYRQGDFID 177

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH  STG+VK F KLMKVAGAYWRGD+  PML RIYGTAW  + EL  YL  L+E+
Sbjct: 178 LCRGPHSPSTGRVKAF-KLMKVAGAYWRGDAKGPMLQRIYGTAWRNKDELNAYLECLKEA 236

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVL 300
           EKRDHRK+A++MDLFHI E+  G +FWH +G+ ++  L SY+R+K+  + Y E+ TP ++
Sbjct: 237 EKRDHRKIAKDMDLFHIQEEAVGQVFWHEQGYILYNVLESYIRKKLINNGYFEVKTPILV 296

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            + LW++SGHWD +R NMF V        + +  A+KPMNCP HV +FN   +SYR+LP+
Sbjct: 297 SKELWEKSGHWDKFRENMFIV-----DESESKKLAIKPMNCPCHVQIFNSHTRSYRDLPI 351

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AEFG+ +RNE SGSLHGLMRVRGFTQDDAH+FC +EQ+ +E +K  +L+  +Y + GF
Sbjct: 352 RMAEFGTCHRNESSGSLHGLMRVRGFTQDDAHIFCMEEQVNSETIKFCDLLKEVYSELGF 411

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
            +I VK S RP+ R G D +WD AE  +   +          ++  +  GEGAFYGPK E
Sbjct: 412 NEISVKFSDRPDVRAGDDEVWDRAEKALLEAVKEAG------LSYELSPGEGAFYGPKLE 465

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           ++LKDAIGR WQCGT+QVDF LP R  AFY+ +   K HPVM+HRA+ G+ ERFIGI+IE
Sbjct: 466 FVLKDAIGRSWQCGTLQVDFILPERLGAFYIGADGHKHHPVMLHRAILGTFERFIGILIE 525

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           N+ G  P+WL+P Q  + TIT+ A  YA +I+N+LK   + ++TD  NE I+YKIR HS+
Sbjct: 526 NYAGKFPVWLAPTQLAILTITNEADGYATKISNVLKEQGVRVKTDLTNEKISYKIRLHSL 585

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            K+PI+ I G  E + +++ +R  GS   +  SL  AI +L K
Sbjct: 586 NKVPILWIVGKNEVTSKTVSVRNLGSERQESFSLEKAIELLLK 628


>gi|260802092|ref|XP_002595927.1| hypothetical protein BRAFLDRAFT_268618 [Branchiostoma floridae]
 gi|229281179|gb|EEN51939.1| hypothetical protein BRAFLDRAFT_268618 [Branchiostoma floridae]
          Length = 681

 Score =  639 bits (1648), Expect = 0.0,   Method: Composition-based stats.
 Identities = 251/648 (38%), Positives = 363/648 (56%), Gaps = 23/648 (3%)

Query: 2   PSDIKLTFPDGSIKNF-PVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           P+ IK+T PDG   +      T  D+A SIS+ LA   +   +NG V DL  P   + S+
Sbjct: 35  PTPIKVTLPDGKQLDGQAWRTTPLDIATSISKGLADNTIVSKVNGVVWDLDRPFEGDASV 94

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDE 118
           E +  +D  + AV  HS AHI+ EA++  +    +  GP IEDGFYYD   E +  SS++
Sbjct: 95  EFLKFDDEEAKAVYWHSSAHIIGEAMERHYGGC-LCYGPPIEDGFYYDMYLEGRQVSSND 153

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
              +E   + I+    PF++  +  E   ++       +KV ILE        T+YR G 
Sbjct: 154 FPALETVTKSILKEKQPFVRLEMKKEDLLKM--FAYNKFKVRILEQKVTTPTTTVYRCGP 211

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLCRGPHVR TG++K    + K +  YW G ++   L R+YG ++   + L ++  F 
Sbjct: 212 LIDLCRGPHVRHTGKIK-ALHVHKNSSTYWEGKADMESLQRVYGISFPDNKMLKEWKEFQ 270

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
           E++++RDHRK+ RE +LF   E   G  F+  KG  I+  LI Y++ +     ++E+ +P
Sbjct: 271 EQAKERDHRKIGREQELFFFHELSPGSCFFLPKGAHIYNKLIDYIKEEYHKRGFQEVVSP 330

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  LW+ SGHWD Y  NMF+ +       +  TFALKPMNCPGH  +++   +S+RE
Sbjct: 331 NMYNVKLWKTSGHWDHYEENMFSFEV------EKETFALKPMNCPGHCLMYDVRPRSWRE 384

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+A+FG ++RNE SG+L GL RVR F QDDAH+FCT EQ+ +E       + SIY  
Sbjct: 385 LPLRMADFGVLHRNELSGTLTGLTRVRRFQQDDAHIFCTMEQLEDEIEGCLEFMNSIYTT 444

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF  + + LSTRPEK +G    WD AE  +   LD      +      +  G+GAFYGP
Sbjct: 445 FGF-DLKLFLSTRPEKAIGDKETWDRAEKHLASALDKFGMPWK------LNPGDGAFYGP 497

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIG 536
           K +  + DA+ R  QC TIQ+DFN P RFN  YV+    EK  PVMIHRA+ GS+ERFI 
Sbjct: 498 KIDIQVFDALRRAHQCATIQLDFNNPERFNLTYVSGDGDEKKRPVMIHRAILGSVERFIA 557

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKI 595
           I+ ENF G  P WLSP QA++  ++    EYAQ++ N +       E D    +T+N KI
Sbjct: 558 ILCENFGGKWPFWLSPRQAMIVPVSPDQNEYAQKVRNSIHEAGFMCEADCDPGDTMNKKI 617

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           R   + +   I++ G KE    ++ +R   +    + S+ D I    K
Sbjct: 618 RNAQLAQYNFIMVVGKKEVESGTVNVRTRDNKVHGERSVEDVILRFKK 665


>gi|281411969|ref|YP_003346048.1| threonyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
 gi|281373072|gb|ADA66634.1| threonyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
          Length = 640

 Score =  639 bits (1647), Expect = 0.0,   Method: Composition-based stats.
 Identities = 276/649 (42%), Positives = 407/649 (62%), Gaps = 26/649 (4%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            IK+  PDG  K +    T +++A+ +     KKA+   +NG++ DL  P+  +  + ++
Sbjct: 2   KIKVKLPDGKEKEYDRGITPAEIAKELG---VKKAIGAVVNGELWDLKRPIENDCELRLV 58

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWP--EVQVAIGPIIEDGFYYDFD-KEQPFSSDEL 119
           T EDP +    RH+ AHI+A+AV  I+    V++ IGP IE+GFYYDFD K    + ++L
Sbjct: 59  TLEDPEAPEFYRHTMAHILAQAVMRIYGKENVKLGIGPTIENGFYYDFDIKNGKLTEEDL 118

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IE++M++II  + P  ++ +S E+AR+L     + YK+E++E I   + VT+YRQGE+
Sbjct: 119 PKIEQEMKKIIKENLPIERKEISKEEARKL--FNNQPYKLELIEEI-EGDRVTIYRQGEF 175

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPH+ STG VK F KL+ V+GAYWRG    PML+R+YGTA+  +++L  YL FLE
Sbjct: 176 VDLCRGPHLPSTGVVKHF-KLLSVSGAYWRGSEKNPMLTRVYGTAFAKKEDLDNYLKFLE 234

Query: 240 ESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTP 297
           E+++RDHRKL   ++LF +  +   G+ F+  KG  +   L+ + R    +  Y+EI TP
Sbjct: 235 EAQRRDHRKLGPHLELFMLNTEYAPGMPFFLPKGVVVLNELMRFSRELHRERGYQEIFTP 294

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++++ LW+ SGHWD Y  NM+ ++      KD   +A+KPMNCPGH+ V+     SYR+
Sbjct: 295 LIMNEQLWKISGHWDHYAENMYFIE------KDEERYAVKPMNCPGHILVYKSRTVSYRD 348

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R  EFG V+R E SG LHGLMRVR FTQDDAH+FCT +Q+  E L + +LI +IY  
Sbjct: 349 LPLRFFEFGRVHRYERSGVLHGLMRVRSFTQDDAHIFCTPDQIEEEILGVLDLINTIYGQ 408

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF    V+LST PE  +G +A+W+ A   +K  L+         ++  V  GEGAFYGP
Sbjct: 409 FGFTY-RVELSTMPEDHMGDEAIWEKATTALKNALERAG------LSYKVNEGEGAFYGP 461

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K ++ ++D+IGR+WQC TIQ+DF +P +FN  Y+   +++   VMIHRA++GS+ERF GI
Sbjct: 462 KIDFHIRDSIGREWQCATIQLDFMMPEKFNVTYIGPDNKEHKAVMIHRAIYGSLERFFGI 521

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE+F G  P WL+PIQ  V  I+    + A++IA  +      +  D R ET+ Y+IR+
Sbjct: 522 LIEHFAGAFPTWLAPIQVAVIPISEKHNDGAEKIAKRISQEGFRVFFDNRRETLGYRIRQ 581

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
              +KIP +II GDKE     I +R       + V L   +  L  E L
Sbjct: 582 AQTQKIPYMIILGDKELESGKISVRTRTGKEIKDVDLEHFVETLRNEVL 630


>gi|319892730|ref|YP_004149605.1| Threonyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03]
 gi|317162426|gb|ADV05969.1| Threonyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03]
 gi|323464237|gb|ADX76390.1| threonyl-tRNA synthetase [Staphylococcus pseudintermedius ED99]
          Length = 645

 Score =  639 bits (1647), Expect = 0.0,   Method: Composition-based stats.
 Identities = 261/650 (40%), Positives = 397/650 (61%), Gaps = 21/650 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           ++IK+ FPDG+ K F    T  ++A+SIS  L KKAVA   N ++ DL+ P+  +G+IEI
Sbjct: 2   AEIKVQFPDGNEKAFEKGTTTEEIAQSISPGLRKKAVAGKFNQQLVDLTRPLEEDGAIEI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           ITP    +L V+RHS AH+MA+A++ ++ +V   +GP+I+ GFYYDFD E+  SSD+  +
Sbjct: 62  ITPGSDEALEVLRHSTAHLMAQALKRLYGDVHFGVGPVIDGGFYYDFDMEEKVSSDDFEK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK M++II  +    +Q +S ++A+       + YK+E++E+IP  E VTLY QGE+ D
Sbjct: 122 IEKTMKQIIEENHKVERQVVSRDEAKAF--FANDPYKLELIEAIPQDEQVTLYSQGEFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG HV ST ++K F KL+  AGAYWRGDSN  ML RIYGTA+  +++L  +L  LEE 
Sbjct: 180 LCRGVHVPSTSKIKAF-KLLSTAGAYWRGDSNNKMLQRIYGTAFFDKKDLKAHLQLLEER 238

Query: 242 EKRDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHR++ +EM+LF +    G+G+  W   G  I + +  Y+  ++I   Y+ + TP +
Sbjct: 239 KERDHRRIGKEMELFTNNQLVGAGLPLWLPNGATIRREIERYIVDKEISLGYDHVYTPVM 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +  L++ SGHWD Y+ +MF     D          L+PMNCP H+ ++ +   SYRELP
Sbjct: 299 ANVDLYKTSGHWDHYQEDMFPPMQLDAD----EAMVLRPMNCPHHMMIYANKPHSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G+++R E SG++ GL RVRG T +DAH+F   +Q+  E  ++  +I+ +Y+DFG
Sbjct: 355 IRIAELGTMHRYEASGAVSGLQRVRGMTLNDAHIFVRPDQIKEEFKRVVQMILDVYEDFG 414

Query: 420 FEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           FE    +LS R +    K    D +W+ AE ++K  +D +    ++ I      GE AFY
Sbjct: 415 FEDYKFRLSYRDKADKEKYYDDDDMWNTAEAMLKEAVDEMNLPYEEAI------GEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G++    T Q+DF LP +F   Y+    E   PV+IHR V  ++ERF+
Sbjct: 469 GPKLDVQVKTAMGKEETLSTAQLDFLLPKKFELTYIGKDGEHHRPVVIHRGVVSTMERFV 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             + E  KG  P WL+P Q  +  + +    +YA++I + LKS  + +  D RNE + YK
Sbjct: 529 AFLTEETKGAFPTWLAPQQVEIIPVNNDLHYDYARQIHDELKSQGVRVHIDDRNEKMGYK 588

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IRE  +KKIP  ++ GDKE     + +R++GS   + V     I  L  E
Sbjct: 589 IREAQMKKIPYQLVVGDKELENNEVNVRQYGSKDQKTVEKDTFIWDLVDE 638


>gi|282881717|ref|ZP_06290380.1| threonine--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
 gi|281304476|gb|EFA96573.1| threonine--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
          Length = 655

 Score =  639 bits (1647), Expect = 0.0,   Method: Composition-based stats.
 Identities = 248/650 (38%), Positives = 392/650 (60%), Gaps = 19/650 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            +K+TFPDGS++ +    TG  +AESIS +LA+  V+  +NG+  +L+ P+  + +I + 
Sbjct: 1   MVKITFPDGSVREYEQGVTGLQIAESISPALARNVVSCGVNGETVELNRPINNDATIALY 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ--PFSSDELA 120
             ED        H+ AH++AEA+Q ++P +Q   GP IE+GF+YD   ++    S  +  
Sbjct: 61  KFEDEEGKHTFWHTSAHLLAEALQELYPGIQFGFGPAIENGFFYDVMPKEGTTISETDFP 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IE KM E+  ++ P +++ +S   A + F+   + YK E ++       ++ Y QG + 
Sbjct: 121 KIEAKMMELAKKNEPVVRRNISKADALKEFQEDGQDYKCEHIDQDLEDGTISTYTQGHFT 180

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ STG +K   K+  VAGA+WRGD+ R  ++RIYG  +  ++ L +YL  LEE
Sbjct: 181 DLCRGPHLLSTGLIK-AVKITSVAGAFWRGDAKREQMTRIYGITFPKKKMLDEYLTMLEE 239

Query: 241 SEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           ++KRDHRK+ +EM+LF  +   G G+  W  KG ++   L   +R  + +  Y+E+ TP 
Sbjct: 240 AKKRDHRKIGKEMELFMFSERVGKGLPIWLPKGTELRLRLQDMLRNIQRRYGYQEVITPH 299

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +  ++L+  SGH+  Y  + F       T ++   + LKPMNCP H  VF +  +SY++L
Sbjct: 300 IGSKNLYVTSGHYAHYGKDSFQ---PIHTPEEDEEYMLKPMNCPHHCEVFAYKPRSYKDL 356

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG+VYR E SG LHGL RVR FTQDDAH+FC  +Q+ NE L++ ++I +++K F
Sbjct: 357 PLRIAEFGTVYRYEKSGELHGLTRVRSFTQDDAHIFCRPDQVKNEFLRVMDIIQAVFKIF 416

Query: 419 GFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            F+    ++S R  K     +GSD +W ++E  +      I    +  ++  V  GE AF
Sbjct: 417 NFDNFEAQISLRDPKDKEKYIGSDEVWAESEQAI------IDACKEKGLDAKVEYGEAAF 470

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK ++++KDAIGR WQ GTIQVD+NLP RF   Y +  + K  PVM+HRA FGS+ERF
Sbjct: 471 YGPKLDFMVKDAIGRRWQLGTIQVDYNLPQRFKLEYTDEDNSKRTPVMVHRAPFGSLERF 530

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             ++IE+  G+ PLWL+P Q  +  I+     YA+++A    +  +    D RNE I  K
Sbjct: 531 TAVLIEHTAGHFPLWLTPDQVAILPISEKYNAYARQVAKQFAAQQVRATIDDRNEKIGRK 590

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IR++ +K++P ++I G+KEA++  + +R  G      + + + I  +  E
Sbjct: 591 IRDNELKRVPYMVIVGEKEAADGLVSMRERGGGEQATLRVDEFIARINNE 640


>gi|189461814|ref|ZP_03010599.1| hypothetical protein BACCOP_02480 [Bacteroides coprocola DSM 17136]
 gi|189431408|gb|EDV00393.1| hypothetical protein BACCOP_02480 [Bacteroides coprocola DSM 17136]
          Length = 646

 Score =  639 bits (1647), Expect = 0.0,   Method: Composition-based stats.
 Identities = 261/649 (40%), Positives = 392/649 (60%), Gaps = 19/649 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+TFPDGS++ +    TG  +AESIS  LA+  +A A+NG+  DL+ P+  +    + 
Sbjct: 1   MIKITFPDGSVREYNEGVTGLQIAESISSRLAQDVLACAVNGETIDLTRPINEDAEFVLY 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
             ED +      H+ AH++AEA+Q ++P +Q  IGP IE+GFYYD D  E      +L  
Sbjct: 61  KWEDEQGKHAFWHTSAHLLAEALQELYPGIQFGIGPAIENGFYYDVDPGEAVIKEGDLPA 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEKKM E+ ++    +++ +S E A ++F  + E YK E++  +    ++T Y QG + D
Sbjct: 121 IEKKMAELASKKEELVRKSISKEDALKMFGERGETYKCELISEL-EDGHITTYTQGAFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ ST  VK   KL+ VAGAYWRG  +R  ++RIYG  +  ++ L +YL  LEE+
Sbjct: 180 LCRGPHLPSTAPVK-AIKLLSVAGAYWRGQEDRKQMTRIYGITFPKKKMLDEYLALLEEA 238

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           +KRDHRK+ +EMDLF  ++    G+  W  KG  +   L  ++RR + + DY+E+  P +
Sbjct: 239 KKRDHRKIGKEMDLFMFSDTVGKGLPMWLPKGTALRIRLQDFLRRIQARYDYQEVMCPPI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            ++ L+  SGH+  Y  + F       T ++   + LKPMNCP H  ++ +  +SYR+LP
Sbjct: 299 GNKLLYVTSGHYAKYGKDAFQ---PIHTPEEGEEYFLKPMNCPHHCMIYKNTPRSYRDLP 355

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AEFG+V R E SG LHGL RVR FTQDDAH+FC  +Q+ +E L++ ++I  ++K  G
Sbjct: 356 LRIAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKDEFLRVMDIISIVFKSMG 415

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
            E    ++S R     EK +GSD  W+ AE  +    +      +  +   V  GE AFY
Sbjct: 416 LENFEAQISLRDKVNREKYIGSDENWEKAEQAIVEACE------EKGLKAKVEYGEAAFY 469

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDAIGR WQ GTIQVD+NLP RF   Y+ S ++K  PVMIHRA FGS+ERF+
Sbjct: 470 GPKLDFMVKDAIGRRWQLGTIQVDYNLPERFQLEYMGSDNQKHRPVMIHRAPFGSMERFV 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE+  G  PLWL+P Q  +  I+    +YA ++   LK   +    D RNE I  KI
Sbjct: 530 AVLIEHTAGKFPLWLTPDQVAILPISEKFNDYANQVRLELKKSDIRAIVDDRNEKIGRKI 589

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R++ +K+IP ++I G+KEA    + +R+ G      + + D    + +E
Sbjct: 590 RDNEMKRIPYMLIVGEKEAENGEVAVRKQGEGDKGTMKIEDFAKNVAEE 638


>gi|157691545|ref|YP_001486007.1| threonyl-tRNA synthetase [Bacillus pumilus SAFR-032]
 gi|157680303|gb|ABV61447.1| threonine--tRNA ligase [Bacillus pumilus SAFR-032]
          Length = 643

 Score =  639 bits (1647), Expect = 0.0,   Method: Composition-based stats.
 Identities = 280/637 (43%), Positives = 430/637 (67%), Gaps = 18/637 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
             +K+ FPDG IK F    T +DVA  IS SL KKAVA  IN ++ D+S  +  +  + I
Sbjct: 7   KMVKIQFPDGKIKEFSAGTTVADVASYISPSLRKKAVAGKINEQMVDVSHQLESDTRLSI 66

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +T +    L V+RH+ AH++A+AV+ ++  V + IGP+IE+GFYYD    Q  S ++LA 
Sbjct: 67  VTLDSKEGLEVLRHTSAHVLAQAVKRLYGNVTLGIGPVIENGFYYDMKLNQTLSVEDLAA 126

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK+M+ II  +    ++ +S+++A  +FE   + YK++IL  +P++E +T+Y+QGE+ D
Sbjct: 127 IEKEMENIINENHLIQRKEISYKEAESMFE--HDPYKLDILNRLPSEEAITVYQQGEFID 184

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ STG VK F KL +VAGAYWRGDS + +L R+YG A+   ++L +YL+F+EE+
Sbjct: 185 LCRGPHLPSTGFVKSF-KLTRVAGAYWRGDSQQDVLQRVYGVAFQHPKQLAEYLHFMEEA 243

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
            KRDHRKL +++ LF  +E+  G+ F+  K   +   L+++ R  + K  YEE++TP ++
Sbjct: 244 SKRDHRKLGKQLSLFMFSEEAPGMPFYLPKSQIVRNELMAFSREVRSKAQYEEVSTPFMM 303

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +Q LW++SGHWD Y  NM+  +       D  +FALKPMNCPGH+ +F + L SYR+LP+
Sbjct: 304 NQELWEKSGHWDHYHENMYFSEV------DHTSFALKPMNCPGHMLMFKNSLFSYRDLPI 357

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AEFG V+R+E SG+L+GL RVR F QDDAH+F  ++Q+  E  +I  L+  +Y+ FGF
Sbjct: 358 RMAEFGQVHRHEFSGALNGLFRVRTFCQDDAHIFLREDQIEAEIKRIFQLVDHVYRTFGF 417

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           E   V+LSTRPEK +G DA+WD +E+ +K VLD +K      ++  +  G+GAFYGPK +
Sbjct: 418 EYS-VELSTRPEKALGDDAIWDISESALKNVLDRLK------VDYQLNEGDGAFYGPKID 470

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           + +KDA+ R  QC TIQ+DF +P +F+  Y+N  +EK  PV+IH A+FGS++RF+GI+IE
Sbjct: 471 FHIKDALQRSHQCATIQLDFQMPEKFDLTYINEKNEKVRPVVIHSAIFGSLDRFLGILIE 530

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +F G  PLWL+P+Q  +  ++   +++  E+   L+   + +  D R+E + YK+RE  +
Sbjct: 531 HFAGAFPLWLAPVQVQIIPVSKIHLDHCLEVQQQLRKIGIRVTIDERDEKLGYKMREAQM 590

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
           +KIP I + GD E  E+++ IR+ G  T+ ++S+ D 
Sbjct: 591 QKIPYIAVIGDTEMQEKTLNIRQHGEKTSNQLSIDDF 627


>gi|300814791|ref|ZP_07095034.1| threonine--tRNA ligase [Peptoniphilus sp. oral taxon 836 str.
           F0141]
 gi|300511099|gb|EFK38356.1| threonine--tRNA ligase [Peptoniphilus sp. oral taxon 836 str.
           F0141]
          Length = 636

 Score =  638 bits (1645), Expect = e-180,   Method: Composition-based stats.
 Identities = 266/640 (41%), Positives = 399/640 (62%), Gaps = 16/640 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDG  K F    +  +V +SIS  L + +V   +N KV   +D +  + + +++  +
Sbjct: 3   ITLPDGEKKEFEKGISVGEVTKSISEGLYRDSVGAKVNDKVLGNADKINEDSTFKVLKLD 62

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D     ++ HS +H+MA A+++++P  + AIGP I+ GFYYD D +  F  ++   IEKK
Sbjct: 63  DLEGQKILWHSASHLMAYAIETLYPNTKFAIGPAIDSGFYYDMDLDHRFVEEDFQAIEKK 122

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M E+   D   ++  ++ + A + F+ K + YKVE++E +   E +TLY+ GE+ DLCRG
Sbjct: 123 MIELAREDLKIVRVDITRDAAIKYFKEKGQDYKVELIEDLAEDEPITLYQMGEFTDLCRG 182

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PH+ ST ++K   KL+  AGAYWRGDSN  ML RIYG A++ +++L +Y+   EE+EKRD
Sbjct: 183 PHLESTKKIK-AVKLLSTAGAYWRGDSNNKMLQRIYGIAFDKKKKLDEYIEKREEAEKRD 241

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHL 304
           HRKL RE+DLF + E+G G  F+H  G  I   L+S+ +  +++  Y EI TP +L++ L
Sbjct: 242 HRKLGRELDLFSMHEEGPGFPFFHPNGMIIRNNLLSWWKNVLQERGYGEILTPVILNEDL 301

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W +SGHWD Y+ NM+       T  D   +A+KPMNCPG   +++    SYR+LP+R AE
Sbjct: 302 WHRSGHWDHYKENMYF------TEIDEEGYAVKPMNCPGSTLIYSTTPHSYRDLPLRYAE 355

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FG V+R+E SG+LHGL RVR FTQDDAH++C   Q+ +E  +I +L   +Y  FGF+   
Sbjct: 356 FGLVHRHELSGALHGLFRVRSFTQDDAHIYCLPNQIKSEVFEIIDLANLLYDTFGFKYS- 414

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           V+LSTRP+  +G    W++AE  +K  L+      +  +   +  G+GAFYGPK +Y L+
Sbjct: 415 VELSTRPDDYMGDLESWNEAEKALKEALE------EKGMPYTINEGDGAFYGPKIDYHLE 468

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           DAIGR WQCGTIQ+DF LP  F   YV     K  PVM+HRA+FGS+ERF+GI+IE+F G
Sbjct: 469 DAIGRTWQCGTIQLDFQLPQNFELTYVAEDGSKKRPVMLHRALFGSVERFMGILIEHFAG 528

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             PLWLSP+Q  +  ++     YA E+ + LK   + ++ D R E + YKIRE  +KK+ 
Sbjct: 529 KFPLWLSPVQVEIIPVSEKFKPYAGEVFDQLKKAGIRVKIDERAEKVGYKIREAQLKKVN 588

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            +++ G+KE +   + +R+      + V +   I  L +E
Sbjct: 589 YMLVIGEKETASHKLSVRKRSGEEVKDVEVSKFIEDLKEE 628


>gi|260424668|ref|ZP_05732876.2| threonine--tRNA ligase [Dialister invisus DSM 15470]
 gi|260402758|gb|EEW96305.1| threonine--tRNA ligase [Dialister invisus DSM 15470]
          Length = 647

 Score =  637 bits (1644), Expect = e-180,   Method: Composition-based stats.
 Identities = 270/643 (41%), Positives = 404/643 (62%), Gaps = 16/643 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEII 62
            I +   DG   +F    T  + A+ IS SLAK  +   ++G++ D+ + + +G+ +E  
Sbjct: 13  MITIRLKDGKELHFENEVTLFEAAKKISNSLAKDVLVAKVDGELTDIRNNITDGTQVEFF 72

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T  D   L  +RH+ AH+MA+A+Q ++P  + AIGP I+DGFYYD + +  FS ++ A I
Sbjct: 73  TKADKEGLFTLRHTAAHVMAQAIQHLYPGTKFAIGPAIDDGFYYDLESDHVFSQEDFAAI 132

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M +I   + P  K+ LS  +A E F SK + YKV +++ +P    ++ Y QG++ DL
Sbjct: 133 EKEMAKIAKANLPIEKKILSRNEALEFFRSKNQDYKVILIQDLPEDAIISTYTQGDFTDL 192

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHVRSTG++K F KLM VAGAYWRGD +  ML RIY TA+  ++EL ++L+   E+E
Sbjct: 193 CRGPHVRSTGKLKVF-KLMAVAGAYWRGDEHNKMLQRIYATAFFDKEELDRFLFVRAEAE 251

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL ++++LF   E+G G  F+H KG  I   LI+Y R   ++  YEEI TP +L 
Sbjct: 252 KRDHRKLGKQLNLFSFHEEGPGFPFFHPKGMVIRNELIAYERELFREFGYEEIMTPIILS 311

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW QSGHWD Y+ NM+  +       D   +A+KPMNCPG +  +     SYRELP R
Sbjct: 312 KKLWLQSGHWDHYKENMYFTQI------DEEDYAVKPMNCPGGILYYKTNQHSYRELPKR 365

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           + EFG V+R+E  G+LHGL RVR FTQDDAH+F T++QM +E +K   +   +Y  FG E
Sbjct: 366 VGEFGIVHRHELHGALHGLFRVRVFTQDDAHIFMTQDQMKDEVIKTMEMYRKLYSVFGLE 425

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRPE  +GS+ LW+ + N ++  ++         +   +  G+GAFYGPK ++
Sbjct: 426 YH-VELSTRPENSMGSEELWEISTNALRDAVEAAG------VPYVINEGDGAFYGPKLDF 478

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KD +GR WQCGTIQ+D  LP RF+  YV    EK   VM+HRA +GS+ERFIGI+IE+
Sbjct: 479 HIKDCLGRTWQCGTIQMDMQLPERFDVNYVGEDGEKHRAVMLHRAGYGSLERFIGILIEH 538

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           F G  P W++P+Q  V  +T   + YA+ +A+ L + ++ +E +  N+T+ YKIR+  ++
Sbjct: 539 FAGAFPSWIAPVQVKVVPVTEKHMNYARSVADALSASNVRVEIEEGNDTLGYKIRKAQME 598

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K+P  ++ GDKE +  ++ +R   +     + +   +  L +E
Sbjct: 599 KVPYTLVVGDKEMNGHTVSVRSRKNGDEGSLPVAVFVSNLIRE 641


>gi|311747151|ref|ZP_07720936.1| threonine--tRNA ligase [Algoriphagus sp. PR1]
 gi|126578860|gb|EAZ83024.1| threonine--tRNA ligase [Algoriphagus sp. PR1]
          Length = 649

 Score =  637 bits (1644), Expect = e-180,   Method: Composition-based stats.
 Identities = 264/649 (40%), Positives = 399/649 (61%), Gaps = 19/649 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
           M   IK+T PDGS + +    TG  +A SIS  LA+  +A  +N +V D + P+++ + +
Sbjct: 1   MSQQIKITLPDGSERMYEKGTTGLQIAASISEGLARNVLAAKVNDQVWDATRPIQDDANV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDE 118
           +++T  D        HS AH++AEA++++ P ++  IGP IE GFYYD D  E+     E
Sbjct: 61  QLLTWNDGEGKNTFWHSSAHLLAEALEALHPGIKFGIGPPIETGFYYDVDFGEKTLDGSE 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L  IEKKM E+    + ++++ +S   A   ++ K + YK+++LE +    ++T Y QG 
Sbjct: 121 LEAIEKKMVELAREKNEYIRKDISKSDAVAYYQEKGDEYKLDLLEGL-EDGSITFYEQGN 179

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + DLCRGPH+ +TG +K   KL  +AGAYWRGD NR ML+RIYG  +   +EL +YL  +
Sbjct: 180 FVDLCRGPHIPNTGFIK-AVKLTNIAGAYWRGDENRKMLTRIYGVTFPKAKELKEYLEMI 238

Query: 239 EESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINT 296
           EE++KRDHRKL RE++LF  +E    G+  W  KG  + + L++++++ + K  Y+++ T
Sbjct: 239 EEAKKRDHRKLGRELELFTFSEKVGMGLPLWLPKGTLLRERLVNFLKKAQDKAGYQQVIT 298

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +  + L++ SGH++ Y  + F       T  +   F LKPMNCP H  ++ H   SY+
Sbjct: 299 PHIGHKVLYETSGHYEKYGKDSFQ---PITTPHEGEEFLLKPMNCPHHCEIYKHKPHSYK 355

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ELP+R AEFG+VYR E SG LHGL RVRGFTQDDAH+FC  +Q+  E +K+ +L++ ++K
Sbjct: 356 ELPIRYAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCRPDQVKEEFIKVIDLVLYVFK 415

Query: 417 DFGFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
             GF+    ++S R  +     +G D  WD      K     I+ +++  ++T   LGE 
Sbjct: 416 ALGFDDFTAQISLRDPENPEKYIGGDEAWD------KAESAIIEAAAEKGLDTVTELGEA 469

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           AFYGPK ++++KDA+GR WQ GTIQVD+ LP RF   Y+ S ++K  PVMIHRA FGS+E
Sbjct: 470 AFYGPKLDFMVKDALGRKWQLGTIQVDYQLPERFQLEYIGSDNQKHRPVMIHRAPFGSLE 529

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
           RF+ ++IE+  GN PLWLSP Q  +  I+   V+YA+EI  +L    +S   D R+E I 
Sbjct: 530 RFVAVLIEHCAGNFPLWLSPEQINILPISEKFVDYAEEIKGILDEAGISGSIDNRDEKIG 589

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            KIR+  +KK+P ++I G+KE  ER + +R+ G       S  + I   
Sbjct: 590 RKIRDSEVKKVPFMLIVGEKEKEERKLSVRKHGQGDLGNFSPEEFINYF 638


>gi|257463827|ref|ZP_05628214.1| threonyl-tRNA synthetase [Fusobacterium sp. D12]
 gi|317061364|ref|ZP_07925849.1| threonyl-tRNA synthetase [Fusobacterium sp. D12]
 gi|313687040|gb|EFS23875.1| threonyl-tRNA synthetase [Fusobacterium sp. D12]
          Length = 637

 Score =  637 bits (1644), Expect = e-180,   Method: Composition-based stats.
 Identities = 299/644 (46%), Positives = 416/644 (64%), Gaps = 16/644 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K+ F DG+++ F        +A+SIS SLAKKAVA  I+G++ D+S  +  +  +E I 
Sbjct: 1   MKIEFLDGNVQEFQEACNMFVIAKSISNSLAKKAVAAKIDGELYDMSYILDHDAKVEFIM 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           PE    + VIRHS AH+MA+AV  ++P  +V IGP IE+GFYYDFD ++ F+ ++L +IE
Sbjct: 61  PESEEGVEVIRHSAAHLMAQAVIRLFPGTKVTIGPSIENGFYYDFDPKEQFTEEDLLKIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           ++M+ +   D    +  +S E+A E FE   E YKVEI++ I   E ++ YRQGE+ DLC
Sbjct: 121 EEMKRLSKEDIKVERFMMSREEAIEYFEKLGEHYKVEIIKDIAKGEQLSFYRQGEFVDLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV STG +K   KL  VAGAYWRGDS   ML RIYG A+ T+++L  +L  +EE+EK
Sbjct: 181 RGPHVPSTGHIK-AIKLKSVAGAYWRGDSKNKMLQRIYGYAFATEKDLKDFLKLMEEAEK 239

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQ 302
           RDHRKL +E++LF ++E G G  F+  KG  +  TLI   R    K  Y +I+TP +L++
Sbjct: 240 RDHRKLGKELELFFLSEYGPGFPFFLPKGMVLRNTLIDLWRAEHEKAGYVQIDTPIMLNR 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW +YR NM+       +  D   FA+KPMNCPG V  F +   SYR+LP R+
Sbjct: 300 ELWEISGHWFNYRENMYT------SSIDDVDFAIKPMNCPGGVLAFKYQQHSYRDLPARV 353

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AE G V+R+E SG+LHGL RVR FTQDD+H+F T+EQ+ +E + + NLI   Y      +
Sbjct: 354 AELGKVHRHEFSGALHGLFRVRAFTQDDSHIFMTEEQIESEIIGVVNLIDKFYSKLFGFQ 413

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             ++LSTRPEK +G+D +W+ AE  + G L  +           +  G+GAFYGPK ++ 
Sbjct: 414 YSIELSTRPEKSIGTDEIWEKAEAALAGALHHLGR------EFKINEGDGAFYGPKLDFK 467

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDAIGR WQCGTIQ+DFNLP RF+  YV    EK  PVMIHR ++GSIERFIGI+IE++
Sbjct: 468 IKDAIGRTWQCGTIQLDFNLPERFDVTYVGEDGEKHRPVMIHRVIYGSIERFIGILIEHY 527

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH-SIK 601
            G  P+WL+P+Q  V TI    V YA+EI   LK   +  E D R+E+I YKIRE     
Sbjct: 528 AGAFPMWLAPVQIKVLTINDDCVSYAKEIVEKLKEQGIRAELDDRSESIGYKIREANGRY 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           KIP+ +I G  E  ++ + IRRFGS   + + L   + ++ +E+
Sbjct: 588 KIPMQVIIGKNEIEKKEVNIRRFGSQAQESMDLNAFLAMVKEEA 631


>gi|91215264|ref|ZP_01252236.1| threonyl-tRNA synthetase [Psychroflexus torquis ATCC 700755]
 gi|91186869|gb|EAS73240.1| threonyl-tRNA synthetase [Psychroflexus torquis ATCC 700755]
          Length = 648

 Score =  637 bits (1644), Expect = e-180,   Method: Composition-based stats.
 Identities = 256/649 (39%), Positives = 382/649 (58%), Gaps = 19/649 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            I +T PDGS+K F   +T  +VA SIS  LA+  ++   N  V +   P+  +G++ ++
Sbjct: 1   MINITLPDGSVKQFDKGSTPMNVAFSISAGLARNVISAKFNDNVVETITPLEEDGNLVLL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQ 121
           T +D        HS AH++A+A+  ++P V + IGP I+ GFYYD D   Q  S ++  +
Sbjct: 61  TFKDDDGKQAFWHSTAHLLAQAITKLYPGVNLTIGPSIDKGFYYDVDPNGQSISENDFPE 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEKKM E+      F    +S  +A E +++K   YKVE++E++   E +T     ++ D
Sbjct: 121 IEKKMLELARGKHDFQMHPVSKTEALEYYKTKNNPYKVELIENLTDGE-ITFCDHDDFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG H+ +TG +K   KLM +AGAYWRGD N   L+RIYG ++  Q+EL +YL  LEE+
Sbjct: 180 LCRGGHIPNTGFIK-AVKLMNIAGAYWRGDENNAQLTRIYGISFPKQKELKEYLELLEEA 238

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           +KRDHRKL +E+ LF  ++    G+  W  KG  +   L  +++  +    Y+ + +P +
Sbjct: 239 KKRDHRKLGKELKLFAFSQKVGLGLPLWLPKGAALRDRLEKFLKDAQENAGYQPVVSPHI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             + L+  SGH+  Y  + F       T +D   + LKPMNCP H  ++N    SYR+LP
Sbjct: 299 GQKELYMTSGHFQKYGEDSFQ---PIKTPQDGEEYLLKPMNCPHHCEIYNAQTWSYRDLP 355

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
            R AEFG+VYR E SG LHGL RVRGFTQDDAH+FCT EQ+  E  K+ +L++ ++   G
Sbjct: 356 QRYAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCTPEQLDEEFKKVIDLVLYVFGSLG 415

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           FE    ++S R  +     +GSD  W  AE+ +    +      +  +   ++ GE AFY
Sbjct: 416 FENFTAQVSLRDPENPSKYIGSDENWKKAESAILNAAE------EKGLTYKIVKGEAAFY 469

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDA+GR WQ GTIQVD+NLP RF   Y  S +E   PVMIHRA FGS+ERFI
Sbjct: 470 GPKLDFMVKDALGRQWQLGTIQVDYNLPERFELEYKGSDNEMHRPVMIHRAPFGSLERFI 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            I+IE+  GN PLWL P QA + +I+     Y++++ +LLK H +    D R ET+  KI
Sbjct: 530 AILIEHTGGNFPLWLMPEQATILSISEKYENYSKKVLSLLKKHEIRATFDNRGETMGKKI 589

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           RE  + K P ++I G+ E    ++ +R+ G     ++S+     I+  +
Sbjct: 590 REAEMNKTPYMLIVGESEVENETVSVRKHGGEDLGQMSITSFAEIINAQ 638


>gi|255008477|ref|ZP_05280603.1| putative threonyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
 gi|313146205|ref|ZP_07808398.1| threonine-tRNA ligase [Bacteroides fragilis 3_1_12]
 gi|313134972|gb|EFR52332.1| threonine-tRNA ligase [Bacteroides fragilis 3_1_12]
          Length = 646

 Score =  637 bits (1644), Expect = e-180,   Method: Composition-based stats.
 Identities = 257/649 (39%), Positives = 393/649 (60%), Gaps = 19/649 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+TFPDGS++ +     G  +AESIS  LA+  +A  +NG++ DL  P+  + S+ + 
Sbjct: 1   MIKITFPDGSVREYNEGVNGLQIAESISSRLAQDVLACGVNGEIYDLGRPINEDASVVLY 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
             ED +      H+ AH++AEA+Q ++P +Q  IGP IE+GFYYD D  E      +L  
Sbjct: 61  KWEDEQGKHAFWHTSAHLLAEALQELYPGIQFGIGPAIENGFYYDVDPGEAVIKESDLPA 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE KM E++A+    +++ ++   A ++F  + E YK E++  +    ++T Y QG++ D
Sbjct: 121 IEAKMAELVAKKEVVVRRDIAKNDALKMFGDRGETYKCELISEL-EDGHITTYTQGDFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ +T  +K   KL  VAGAYWRG  +R ML+RIYG  +  ++ L +YL  +EE+
Sbjct: 180 LCRGPHLMTTAPIK-AIKLTSVAGAYWRGHEDRKMLTRIYGITFPKKKMLDEYLALMEEA 238

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           +KRDHRK+ +EM LF  ++    G+  W  KG  +   L  ++RR + + DY+E+ TP +
Sbjct: 239 KKRDHRKIGKEMQLFMFSDTVGKGLPMWLPKGTALRLRLQDFLRRIQTRYDYQEVITPPI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            ++ L+  SGH+  Y  + F       T ++   + LKPMNCP H  ++ +  +SY++LP
Sbjct: 299 GNKLLYVTSGHYAKYGKDAFQ---PIHTPEEGEEYFLKPMNCPHHCEIYKNFPRSYKDLP 355

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AEFG+V R E SG LHGL RVR FTQDDAH+FC  +Q+  E L++ ++I  +++   
Sbjct: 356 LRIAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKGEFLRVMDIISIVFRSMD 415

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           F     ++S R     EK +GSD  W+ AE  +    +      +  +   +  GE AFY
Sbjct: 416 FTNFEAQISLRDKVNREKYIGSDENWEKAEQAIIEACE------EKGLKAKIEYGEAAFY 469

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDAIGR WQ GTIQVD+NLP RF   Y+ S ++K  PVMIHRA FGS+ERF+
Sbjct: 470 GPKLDFMVKDAIGRRWQLGTIQVDYNLPERFELEYMGSDNQKHRPVMIHRAPFGSMERFV 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE+  G  PLWL+P Q ++  I+    EYA+++   LK+  +    D RNE I  KI
Sbjct: 530 AVLIEHTAGKFPLWLTPEQVVILPISEKFNEYAEKVKTYLKTKEIRAIVDDRNEKIGRKI 589

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R++ +K+IP ++I G+KEA    + +RR G      +   D   IL +E
Sbjct: 590 RDNEMKRIPYMLIVGEKEAENGEVSVRRQGEGDKGTMKFEDFGEILNEE 638


>gi|333029961|ref|ZP_08458022.1| threonyl-tRNA synthetase [Bacteroides coprosuis DSM 18011]
 gi|332740558|gb|EGJ71040.1| threonyl-tRNA synthetase [Bacteroides coprosuis DSM 18011]
          Length = 647

 Score =  637 bits (1643), Expect = e-180,   Method: Composition-based stats.
 Identities = 264/649 (40%), Positives = 386/649 (59%), Gaps = 19/649 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            IK+TFPD SI+ +    TG  +AESIS  LAK+ +A  +NG+  DL+ P+  +  + + 
Sbjct: 2   MIKITFPDDSIREYEKGVTGLQIAESISPRLAKEVLACGVNGETYDLTRPIEEDAKVVLY 61

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
             ED        H+ AH++AEA+Q+++P +Q  IGP IE GFYYD D         +L  
Sbjct: 62  KWEDEEGKHAFWHTSAHLLAEALQALYPGIQFGIGPAIEQGFYYDVDPGTATIKESDLPT 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE KMQE  +   P +++ +S   A + F  + E YK E++  +    ++T Y QG + D
Sbjct: 122 IEAKMQEFASMKEPLVRKSISKADALKYFADRDETYKCELISEL-EDGHITTYTQGGFTD 180

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ ST  +K   KL  VAGAYWRG  ++ ML+RIYG  +  ++ LT+YL  +EE+
Sbjct: 181 LCRGPHLPSTAPIK-AIKLTTVAGAYWRGQEDKKMLTRIYGITFPKKKLLTEYLEMMEEA 239

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQV 299
           +KRDHRK+ +EM+LF  +E    G+  W  KG  +   L  ++++  K+  YE++ TP +
Sbjct: 240 KKRDHRKIGKEMELFMFSETVGKGLPMWLPKGTALRLRLEDFLKKIQKEFGYEQVITPHI 299

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            ++ L+  SGH+  Y  + F       T ++   + LKPMNCP H  ++    +SYRELP
Sbjct: 300 GNKLLYVTSGHYAKYGKDSFQ---PIHTPEEGEEYLLKPMNCPHHCEIYKWTPRSYRELP 356

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +RLAEFG+VYR E SG LHGL RVRGFTQDDAH+FC  +Q+  E L + ++I  I+K   
Sbjct: 357 LRLAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCRPDQVKEEFLSVMDIIFIIFKALN 416

Query: 420 FEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           FE    ++S R      K +GSD  W+ AEN +           +  +   +  GE AFY
Sbjct: 417 FENFEAQISLRDPVNREKYIGSDENWEKAENAIVEACK------EKGLKAKIEYGEAAFY 470

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +++++DA+GR WQ GTIQVD+NLP RFN  Y  + + K  PVMIHRA FGS+ERF+
Sbjct: 471 GPKLDFMVRDALGRKWQLGTIQVDYNLPERFNLEYTGADNLKHRPVMIHRAPFGSMERFV 530

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE+  G  PLWL+P Q  +  I+    +YA E+   L  + +    D RNE I  KI
Sbjct: 531 AVLIEHTAGKFPLWLTPDQVAILPISERFNDYAHEVKKYLDKNDIRASVDDRNEKIGRKI 590

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R++ +K+IP ++I G+KEA  R + +R+ G      + L D    L +E
Sbjct: 591 RDNEVKRIPYMLIVGEKEAENREVSVRKQGEGDQGVIKLEDFAKKLNEE 639


>gi|15643503|ref|NP_228549.1| threonyl-tRNA synthetase [Thermotoga maritima MSB8]
 gi|8928373|sp|Q9WZJ9|SYT_THEMA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|4981265|gb|AAD35821.1|AE001744_11 threonyl-tRNA synthetase [Thermotoga maritima MSB8]
          Length = 640

 Score =  637 bits (1643), Expect = e-180,   Method: Composition-based stats.
 Identities = 274/649 (42%), Positives = 407/649 (62%), Gaps = 26/649 (4%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            IK+  PDG  K +    T +++A+ +     KKA+   +NG++ DL  P+  +  + ++
Sbjct: 2   KIKVKLPDGKEKEYDRGITPAEIAKELGI---KKAIGAVVNGELWDLKRPIENDCELRLV 58

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWP--EVQVAIGPIIEDGFYYDFD-KEQPFSSDEL 119
           T EDP +    RH+ AHI+A+AV  ++    V++ IGP IE+GFYYDFD K    + ++L
Sbjct: 59  TLEDPEAPEFYRHTMAHILAQAVMRLYGKENVKLGIGPTIENGFYYDFDIKNGRLTEEDL 118

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IE++M++II  + P  ++ +S E+AREL   + + YK+E++E I     VT+YRQGE+
Sbjct: 119 PKIEQEMKKIIKENLPIERKEISKEEAREL--FRDQPYKLELIEEI-EGNRVTIYRQGEF 175

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPH+ STG VK F KL+ V+GAYWRG    PML+R+YGTA+  +++L  YL FLE
Sbjct: 176 VDLCRGPHLPSTGIVKHF-KLLSVSGAYWRGSEKNPMLTRVYGTAFAKKEDLDNYLKFLE 234

Query: 240 ESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTP 297
           E+++RDHRKL  +++LF +  +   G+ F+  KG  +   L+ + R    +  Y+EI TP
Sbjct: 235 EAQRRDHRKLGPQLELFMLNTEYAPGMPFFLPKGVVVLNELMKFSRELHRERGYQEIFTP 294

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++++ LW+ SGHWD Y  NM+ ++      KD   +A+KPMNCPGH+ V+     SYR+
Sbjct: 295 LIMNEQLWKISGHWDHYAENMYFIE------KDEERYAVKPMNCPGHILVYKSRTVSYRD 348

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R  EFG V+R E SG LHGLMRVR FTQDDAH+FCT +Q+  E L + +LI +IY  
Sbjct: 349 LPLRFFEFGRVHRYERSGVLHGLMRVRSFTQDDAHIFCTPDQIEEEILGVLDLINTIYSQ 408

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF    V+LST PE  +G +A+W+ A   +K  L+         ++  V  GEGAFYGP
Sbjct: 409 FGFTY-RVELSTMPEDHMGDEAIWEKATTALKNALERAG------LSYKVNEGEGAFYGP 461

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K ++ ++D+IGR+WQC TIQ+DF +P +FN  Y+   +++   VMIHRA++GS+ERF GI
Sbjct: 462 KIDFHIRDSIGREWQCATIQLDFMMPEKFNVTYIGPDNKEHRAVMIHRAIYGSLERFFGI 521

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE+F G  P WL+PIQ  V  I+    + A+++A  +      +  D R ET+ Y+IR+
Sbjct: 522 LIEHFAGAFPTWLAPIQVAVIPISEKHNDGAEKVARRISQEGFRVFFDNRRETLGYRIRQ 581

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
              +KIP +II GDKE     I +R       + V     +  L  E L
Sbjct: 582 AQTQKIPYMIIIGDKELESGKISVRTRTGKEIKDVDPEHFVETLRNEVL 630


>gi|194335337|ref|YP_002017131.1| threonyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1]
 gi|238693365|sp|B4SB93|SYT_PELPB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|194307814|gb|ACF42514.1| threonyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1]
          Length = 657

 Score =  637 bits (1643), Expect = e-180,   Method: Composition-based stats.
 Identities = 254/651 (39%), Positives = 390/651 (59%), Gaps = 16/651 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           I LT PDGS+K FP+  TG+DVA SI R LA+ A+A+ +NG   DLS P+  + +IEIIT
Sbjct: 11  IALTLPDGSVKTFPIGTTGNDVALSIGRKLAQDALALRVNGVAIDLSTPLTADAAIEIIT 70

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
              P    +  HS +H+MA+A++ ++P  +   GP IE GFYYD      F  ++L +IE
Sbjct: 71  FSSPAGQDIFWHSSSHLMAQAIEELYPGSKFGAGPSIEQGFYYDVASTHRFREEDLRKIE 130

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFE-SKKEAYKVEILES-IPAKENVTLYRQGEWFD 181
           ++M EI  RD    ++ +S   A E F+  + + YKVEILE  +   E V+LY Q  + D
Sbjct: 131 ERMLEISKRDIQIRREEMSRTDAIEFFKTVRNDPYKVEILEDTLKEVERVSLYHQDGFTD 190

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LC GPH+ ST +VK    L  ++ +YWRGDS R  + RIYG  + +++ L +++  LEE+
Sbjct: 191 LCIGPHIPSTSKVK-AVLLSNISSSYWRGDSARENMQRIYGITFPSEKLLKEHVARLEEA 249

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQV 299
           ++RDHRKL  E++LF ++ + GSG+  W  KG  I   L ++++ + +   Y  + TP +
Sbjct: 250 KRRDHRKLGAELELFMLSPEVGSGLPIWLPKGAIIRNELETFLKEEQRKRGYLPVYTPHI 309

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +  L+++SGH+  Y  + F      D       + LKPMNCP H  +++  ++SYR+LP
Sbjct: 310 GNIELYKRSGHYPYYSDSQFPPLTYHDEEGKQEQYLLKPMNCPHHHLIYSSKMRSYRDLP 369

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +RL EFG+VYR+E SG L+GL+R RGFTQDD+H++C  +Q+ +E      L   ++   G
Sbjct: 370 LRLTEFGTVYRHEQSGELNGLVRARGFTQDDSHIYCRPDQLVDEICSAIELTQFVFGTLG 429

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           F ++  +LS    +      G+  +W+ AE  ++   D +       I+  + +GE +FY
Sbjct: 430 FSEVQTRLSMHDPENQAKYGGTAEVWEQAEKDVQEAADRMG------IDYFIGVGEASFY 483

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++I++DA+GR WQ GT+QVD+ +P RF+  Y  S  +K  PV+IHRA FGS+ERFI
Sbjct: 484 GPKIDFIVRDALGRKWQLGTVQVDYVMPERFDLTYTGSDGQKHRPVVIHRAPFGSMERFI 543

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
           G++IE+  GN PLWL+P+QA+V  I    ++YA+ +   L +  +  E D R+E I  KI
Sbjct: 544 GVLIEHTAGNFPLWLAPVQAVVLPIAEDVLDYAKSVHQALLAAGIRAELDTRSEKIGKKI 603

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           R+  + KIP +I+ G KE     + +RR       + S+   I  L  E  
Sbjct: 604 RDAEVSKIPCMIVIGQKEQESGEVSLRRHRIGDEGRFSVSGLIEKLKTEIT 654


>gi|116626335|ref|YP_828491.1| threonyl-tRNA synthetase [Candidatus Solibacter usitatus Ellin6076]
 gi|116229497|gb|ABJ88206.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Candidatus
           Solibacter usitatus Ellin6076]
          Length = 644

 Score =  637 bits (1643), Expect = e-180,   Method: Composition-based stats.
 Identities = 270/648 (41%), Positives = 383/648 (59%), Gaps = 23/648 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           S+I++T PDGS ++        D+A+SIS  LA  A+   +NG++ DL+ P+  + ++EI
Sbjct: 2   SNIQITLPDGSTQSVAAETRPIDIAKSISPRLADAALVAKVNGELFDLTRPIEKDATLEI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +T ++P SL V RHS AH++A AV  ++PE Q+ IGP IE+GFYYDFD+  PF+ ++L +
Sbjct: 62  LTAKNPESLDVYRHSTAHLLAAAVLELYPETQLGIGPPIENGFYYDFDRPAPFTPEDLEK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE-WF 180
           IEKKM EI AR  P+ +     ++  +      EA+    L    A E  T Y  G  + 
Sbjct: 122 IEKKMWEIQARALPYERVLTPKDEGLK---KYSEAWMKCQLIDERAGEIFTEYTLGPKFI 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           D CRGPH+  T ++K F KL+ +AGAYW+GD     L RIYGTA+ + ++L  YL  +EE
Sbjct: 179 DFCRGPHLPDTSKIKAF-KLLSIAGAYWKGDEKNKQLQRIYGTAFFSPKDLDAYLKQVEE 237

Query: 241 SEKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++KRDHRKL +E+DLF I E  G G+IF+H KG  I + L  +MR +  K  Y  + TP 
Sbjct: 238 AKKRDHRKLGKELDLFSIQELAGPGLIFFHPKGGIIRKLLEDWMRDQYLKRGYSLVYTPH 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    LW+ SGH + Y  NMF     DD       + LKPMNCP H+ ++    +SYR+L
Sbjct: 298 VAKLDLWKTSGHANFYAQNMFTPIELDDA-----EYQLKPMNCPFHILIYADRQRSYRDL 352

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           PVRL E G+VYR E SG+L+GL RVRGFTQDDAH+FC + Q   E +      I     +
Sbjct: 353 PVRLGELGTVYRYERSGTLNGLFRVRGFTQDDAHIFCMQSQAEEEVVNCLQFAIDTLAAY 412

Query: 419 GFEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           GFEK   ++ST       K  G+   W+ AE  ++  +D +K      IN  V+  E AF
Sbjct: 413 GFEKYDAEISTWDGGASGKYDGTPDQWEMAEGALRRAVDKLK------INAKVVADEAAF 466

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  L DAIGR WQ  T+Q DF LP RF   Y+    +   P+M+HRA++GSIERF
Sbjct: 467 YGPKIDVKLVDAIGRKWQLSTVQFDFTLPRRFGLEYIGEDGKAHQPIMVHRALYGSIERF 526

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
            GI++E++ G  P+WL+P+QA +  IT    EYA+ I   L+   +    D RNE +N K
Sbjct: 527 FGILVEHYAGAFPVWLAPVQATILPITDRQTEYARGIKKQLEEAGIRATVDERNEKVNLK 586

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           IR+  ++KIP +++ GD+E     + +R          +L D I  + 
Sbjct: 587 IRDAQMQKIPYMLVVGDREQESGKVAVRNRKHADQGVKTLADFIAEIR 634


>gi|110598676|ref|ZP_01386941.1| threonyl-tRNA synthetase [Chlorobium ferrooxidans DSM 13031]
 gi|110339729|gb|EAT58239.1| threonyl-tRNA synthetase [Chlorobium ferrooxidans DSM 13031]
          Length = 657

 Score =  637 bits (1643), Expect = e-180,   Method: Composition-based stats.
 Identities = 251/651 (38%), Positives = 388/651 (59%), Gaps = 16/651 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           + I +T PDG++++ P  +TG D+A SI R LA+ A+A+ +NG + DLS P+  +  +EI
Sbjct: 9   AMIAITLPDGTVRSCPSGSTGYDIALSIGRKLAQDALALKVNGSLVDLSTPLTSDARVEI 68

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +T + P    +  HS +H+MA+A++ ++   +   GP IE GFYYD   E  F  ++L  
Sbjct: 69  VTFDSPEGKDIFWHSSSHLMAQAIEELFAGSRFGAGPSIEQGFYYDIASEHRFREEDLRL 128

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFE-SKKEAYKVEILES-IPAKENVTLYRQGEW 179
           IE+KM EI  RDS   ++ L+   A E F+  + + YKVEILE  +   + V+LY Q  +
Sbjct: 129 IEQKMLEISKRDSKIQREELTRSAAIEFFKNKRNDPYKVEILEETLKDVDTVSLYHQDGF 188

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLC GPH+ +T +VK    L  ++ +YWRGDS+R  + RIYG  + + ++L +Y+  LE
Sbjct: 189 TDLCTGPHLPTTSKVK-AVLLTNISSSYWRGDSSREQMQRIYGITFPSDKQLKEYVTLLE 247

Query: 240 ESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
           E+++RDHRKL  E++LF ++ + GSG+  W  KG  I   L S+++ + +   Y  + TP
Sbjct: 248 EAKRRDHRKLGAELELFMLSAEVGSGLPIWLPKGAIIRNELESFLKEEQRKRGYLPVYTP 307

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  L+++SGH+  Y  + F      D       + LKPMNCP H  +++  ++SYR+
Sbjct: 308 HIGNIELYKRSGHYPYYSDSQFPPLTYHDEEGRKEQYLLKPMNCPHHHLIYSSKMRSYRD 367

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+RL EFG+VYR+E SG L+GL+R RGFTQDD+H++C  +Q+ +E      L   ++  
Sbjct: 368 LPIRLTEFGTVYRHEQSGELNGLVRARGFTQDDSHIYCRPDQLVDEICSAIELTQFVFGT 427

Query: 418 FGFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
            GF  +  +LS    +      G+  +W  AE  +K   D +       I   + +GE +
Sbjct: 428 LGFNDVQTRLSMHDPENQTKYGGTAEVWAQAEKDVKEAADRMG------IEYFIGIGEAS 481

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK ++I++DA+GR WQ GT+QVD+ +P RF+  Y+ S S+K  PV+IHRA FGS+ER
Sbjct: 482 FYGPKIDFIVRDALGRKWQLGTVQVDYVMPERFDLTYIGSDSQKHRPVVIHRAPFGSMER 541

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           FIG++IE+  GN PLWL+P+QA+V  I     +YA+ +   L    +  E D RNE I  
Sbjct: 542 FIGVLIEHTAGNFPLWLAPVQAVVLPIAEDVHDYAKSVQQALLGAGIRSELDTRNEKIGK 601

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIRE  + K+P +I+ G KE     + +RR         ++      L KE
Sbjct: 602 KIREAELAKVPCMIVIGQKEKESGEVSLRRHRIGDEGCFTVTGLTEKLLKE 652


>gi|213403436|ref|XP_002172490.1| threonyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
 gi|212000537|gb|EEB06197.1| threonyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
          Length = 699

 Score =  637 bits (1643), Expect = e-180,   Method: Composition-based stats.
 Identities = 236/667 (35%), Positives = 359/667 (53%), Gaps = 39/667 (5%)

Query: 5   IKLTFPDGSIKN-FPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEII 62
           I +T PDGS +       T  D+A SIS+ LA + V   +N ++ DL+ P+ +  +++++
Sbjct: 45  ITVTLPDGSTREATSWETTPMDIAVSISKGLADRTVISKVNDQLWDLTRPLEDSCTLKLL 104

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF--DKEQPFSSDELA 120
              DP    V  HS AHI+ EA +  +    + IGP   DGF+Y+   D  +  ++++  
Sbjct: 105 DFNDPEGKRVFWHSSAHILGEASELHF-GCHLCIGPPTTDGFFYEMAIDDNKTVTTEDYP 163

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES-IPAKENVTLYRQGEW 179
            +E   +  I +  PF +  +S E   ++F+     YK  I+ES IP   + T+YR G  
Sbjct: 164 ALEALAKNAIKQKQPFERLIVSKENLLKMFK--HNKYKQHIIESKIPDGTSTTVYRCGPL 221

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLC GPHV  TG+VK F  +MK + +Y+ GD+    L RIYG ++   +++++Y  FL 
Sbjct: 222 IDLCVGPHVPHTGRVKAF-AVMKNSSSYFLGDAKNDSLQRIYGVSFPDNKQMSEYKKFLA 280

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+ KRDHRK+ RE DLF   E   G  F+   G +I+  LI+++R + K   ++E+ TP 
Sbjct: 281 EAAKRDHRKIGREQDLFFFHELSPGSCFFLPHGARIYNQLIAWIREQYKIRGFQEVITPN 340

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           + +  LW+ SGHW++Y  NMF+ +   D       FALKPMNCPGH  ++    +SYR+L
Sbjct: 341 MYNVDLWKTSGHWNNYAENMFSFEIEKDK------FALKPMNCPGHCLIYKSRDRSYRDL 394

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P R A+FG ++RNE SG+L GL RVR F QDDAH+FC  +Q+ +E     + +  +Y  F
Sbjct: 395 PWRCADFGVLHRNEFSGALTGLTRVRRFQQDDAHIFCRPDQVRSEIENCFDFLKYVYGVF 454

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF   +   +   EK +G    W+ AE  +K  LD             +  G+GAFYGPK
Sbjct: 455 GFTFHLELSTRPEEKYLGDLETWNKAEAQLKAALDASGY------EWELNEGDGAFYGPK 508

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS-----------HSEKCHPVMIHRAV 527
            +  + DA+ R  QC TIQ+DF LP RF   +  +            ++   PVMIHRA+
Sbjct: 509 IDITVFDALKRQHQCATIQLDFQLPERFELEFHGTTEGDEAADSTNKNKYIRPVMIHRAI 568

Query: 528 FGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR 587
            GS+ER I I+ E++ G  P WLSP Q  V  ++++A +YA ++   L    L  + D  
Sbjct: 569 LGSVERMIAILTEHYGGKWPFWLSPRQVSVVPVSAAAFDYANKVQKRLFDAGLFADVDTS 628

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ----KVSLLDAIPILT- 642
           + T+  KIR   + +   I + G +E    S+ IR       Q     V L + +  L  
Sbjct: 629 DNTLPKKIRNAQLSQYNFIFVVGAEEEKTNSVNIRNRDDPKKQAKTATVPLDEVVAKLVA 688

Query: 643 -KESLPP 648
            KE+  P
Sbjct: 689 LKETKNP 695


>gi|313205743|ref|YP_004044920.1| ser-tRNA(thr) hydrolase; threonyl-tRNA synthetase [Riemerella
           anatipestifer DSM 15868]
 gi|312445059|gb|ADQ81414.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Riemerella
           anatipestifer DSM 15868]
 gi|315022861|gb|EFT35885.1| threonyl-tRNA synthetase [Riemerella anatipestifer RA-YM]
          Length = 641

 Score =  637 bits (1643), Expect = e-180,   Method: Composition-based stats.
 Identities = 259/650 (39%), Positives = 394/650 (60%), Gaps = 21/650 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            +K+T PDGSI+ F    T  +VA+SIS  LA+  ++  +N K  +++ P+  + +++++
Sbjct: 1   MVKITLPDGSIREFEGVVTPLEVAKSISEGLARNTISAMVNNKQVEVTTPITEDATVQLL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
           T  D        HS AH++A+A+ + +P  ++ IGP IE+GFYYD D  ++  S  +  +
Sbjct: 61  TWNDDMGKKAFWHSSAHLLAQAILAYYPNAKLTIGPAIENGFYYDVDFGDETLSEKDFEK 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE+KM E   +DS F    +S  +A +  E     YK E++E++   E +T     ++ D
Sbjct: 121 IEQKMLENAKKDSTFKLYAISKAEALK--EYADNPYKTELIENLNDGE-ITFCSHDDFTD 177

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG H+ STG VK   K++  AGAYWRGD   P L+R+YG ++  Q++L +YL  LEE+
Sbjct: 178 LCRGGHIPSTGIVK-AVKILNAAGAYWRGDEKNPQLTRVYGISFPKQKDLKEYLERLEEA 236

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           ++RDHRKL +E+ LF  +E    G+  W  KG  + + L S++   + K  YE + TP +
Sbjct: 237 KRRDHRKLGKELGLFTFSEKVGAGLPLWLPKGAALRKKLESFLSEAQRKGGYEFVMTPHI 296

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +  L++ SGH++ Y A+ F       T      F LKPMNCP H  V+     SY++LP
Sbjct: 297 GNIELYKTSGHYEKYGADSFQ---PIKTPHVGEEFLLKPMNCPHHCEVYKAQQWSYKDLP 353

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
            R AEFG+VYR E SG LHGL RVRGFTQDDAH+FCT +Q+  E  K+ +L++ ++K  G
Sbjct: 354 KRYAEFGTVYRYEQSGELHGLTRVRGFTQDDAHLFCTPDQLLEEFEKVIDLVLYVFKSLG 413

Query: 420 FEKIMV----KLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           FE  +     +      K +GS+  W+ AE+ +      I  +    +NT V  GE AFY
Sbjct: 414 FEDFIAQVSLRDKENRAKYIGSEENWEKAESAI------ITAAKNKGLNTVVEYGEAAFY 467

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDA+GR WQ GTIQVD+NLP RF+  YV S +E+  P+MIHRA FGS+ERFI
Sbjct: 468 GPKLDFMVKDALGRSWQLGTIQVDYNLPERFDLTYVGSDNERHRPIMIHRAPFGSMERFI 527

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            I+IEN  G+ PLWL+P Q I+  I+    +YA++++ LL++H +    D RNE    KI
Sbjct: 528 AILIENTAGDFPLWLNPDQYILLPISEKYTDYAKKVSQLLENHDICGLVDERNEKTGKKI 587

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           R+  +KKIP ++I G+ EA  +++ +R+ G     ++S+   +     E+
Sbjct: 588 RDAEMKKIPFMLIVGENEAGNQTVSVRKRGEGDLGEMSIESFVEYFKNEA 637


>gi|108758923|ref|YP_631780.1| threonyl-tRNA synthetase [Myxococcus xanthus DK 1622]
 gi|122981032|sp|Q1D6E3|SYT_MYXXD RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|108462803|gb|ABF87988.1| threonyl-tRNA synthetase [Myxococcus xanthus DK 1622]
          Length = 642

 Score =  637 bits (1642), Expect = e-180,   Method: Composition-based stats.
 Identities = 277/653 (42%), Positives = 404/653 (61%), Gaps = 16/653 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSD-VAESISRSLAKKAVAVAINGKVCDLSDPV-REGS 58
           M   I +T PDGS K      T +D V ESI   LAK A+   +NG+  DL+  +  +  
Sbjct: 1   MSDIITVTLPDGSQKQTARGTTIADFVRESIGPGLAKAALFARVNGQDMDLARKLDEDVK 60

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           ++I TP+ P SL +IRH  AH++A AVQ ++P  QV IGP  E+GFYYDF +E+PF+ ++
Sbjct: 61  LQIFTPKSPESLELIRHDAAHVVASAVQKLFPGTQVTIGPATEEGFYYDFFREKPFTPED 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKE--NVTLYRQ 176
           L +IE +    + RD  F++  +S ++A  LFE K E +KVEI++ I AK    +TLY  
Sbjct: 121 LEKIEAEANAELKRDMAFVRTEISMDEAVRLFEEKGEKFKVEIVKDIAAKGAKTLTLYTH 180

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           G+W D C GPH  STG++    K++  +GAYWRGD   PML R+YGTA+  +++L +YL 
Sbjct: 181 GDWVDFCLGPHAPSTGKIGII-KILSSSGAYWRGDHRNPMLQRVYGTAFFDKKQLAEYLT 239

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEIN 295
            +EES+KRDHRKL +E+DLFH      G  FW  KG  ++ TL ++MR+    D Y EI 
Sbjct: 240 RIEESKKRDHRKLGKELDLFHFHPYSPGSAFWTPKGTTLYTTLSNWMRQLTQNDGYVEIK 299

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP + ++ LW+ SGHW  Y+ NMF V    D+      F+LKPMNCP H   +     SY
Sbjct: 300 TPLMFNKGLWETSGHWGKYKENMFLVL---DSESGEHDFSLKPMNCPSHHLFYGFKKHSY 356

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           R+LP+R      ++RNE +GSL GL RVR F QDDAH++CT+ Q+ +E  +   L+  +Y
Sbjct: 357 RDLPLRYHTQDVLHRNEAAGSLGGLTRVRQFAQDDAHIYCTEAQITDEVRRFVKLLDHVY 416

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           K  G     VKLSTRPE+R+G D+LWD AE  +K  L+++       +   +  G+GAFY
Sbjct: 417 KAVGLTY-AVKLSTRPEQRLGDDSLWDRAEGGLKAALESLG------LEYELAPGDGAFY 469

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++ + D+IGR WQ GT+Q+D+  P RF+  YV   + +  PV++HRA+FGS ERF 
Sbjct: 470 GPKIDFAVSDSIGRRWQLGTMQLDYLAPERFDLTYVGEDNAEHRPVVLHRAIFGSFERFT 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            I+IE+F G  P WL+PIQA++ T+     +YA+++ + L++    +E D R  ++N KI
Sbjct: 530 AILIEHFAGAFPAWLAPIQAVLVTVADRQNDYARKVRDSLRAKGYRVEFDERGLSMNAKI 589

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
           RE  ++K+P  ++ GD E S   +  RR+G    + + + D   +L KE+  P
Sbjct: 590 REAQLQKVPFTLVVGDNEVSGEGVSPRRYGGEDLKTMKVTDFEALLAKEAALP 642


>gi|83816191|ref|YP_446893.1| threonyl-tRNA synthetase [Salinibacter ruber DSM 13855]
 gi|83757585|gb|ABC45698.1| threonyl-tRNA synthetase [Salinibacter ruber DSM 13855]
          Length = 694

 Score =  637 bits (1642), Expect = e-180,   Method: Composition-based stats.
 Identities = 265/648 (40%), Positives = 391/648 (60%), Gaps = 18/648 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
           + I +T PDGS    P   TG ++AESI   LA+ A+A+ +NG+V DL  PV  +  IEI
Sbjct: 45  TSIDITLPDGSTHTHPAGTTGLEIAESIGAGLARDALAIKVNGEVRDLDRPVTEDAEIEI 104

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELA 120
           +T +D        HS AH+MAEA+Q+++P+V+  IGP I+ GFYYD D  +Q  S+DEL 
Sbjct: 105 LTWDDEEGKQTFWHSSAHLMAEALQALYPDVKFTIGPPIDQGFYYDVDLGDQTLSADELE 164

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IE+KM E+  RD+ + +  +S   A E +E++   YK+E+      +  ++ Y QGE+ 
Sbjct: 165 AIEEKMLELARRDAAYERHEVSKADAIEHYEAEGNEYKLEL-IEGLEEGEISFYEQGEFT 223

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ STG +K   KL+ VAGAYWRGD + P L+RIYG ++  Q+ L  +L    +
Sbjct: 224 DLCRGPHIPSTGDIK-APKLLSVAGAYWRGDESNPQLTRIYGISFPKQKLLEDFLERRRK 282

Query: 241 SEKRDHRKLAREMDLFHIAEDG--SGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTP 297
           +++RDHRKL  E++LF    +    G+  W  KG  + QTL   ++  ++K  Y+ + TP
Sbjct: 283 AKERDHRKLGTELNLFTFDTEQVGPGLPMWLPKGTTLRQTLQEVLQQEQVKQGYKPVCTP 342

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKC-ADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
            +    L++ SGH+  Y  + F      +    +   + LKPMNCP HV ++ +   SYR
Sbjct: 343 HIGRLDLYRTSGHYPHYEDDQFPPMVTGEGDDGEEDGYLLKPMNCPHHVKIYQNDHHSYR 402

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +LPVRLAEFG+VYR E +G L GL RVRGFTQDDAH+FCT  Q+ +E   + +L + +  
Sbjct: 403 DLPVRLAEFGTVYRQEQTGELGGLTRVRGFTQDDAHIFCTPAQVKDEFKSVIDLTLKVLD 462

Query: 417 DFGFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
             GFE+   ++S R         G DALW  AE  ++  +      ++  ++     GE 
Sbjct: 463 ALGFEEFEAQISLRDPDDTEKYTGRDALWTRAEQDIREAV------AETDLDAYEEPGEA 516

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           AFYGPK +++++DA+GR WQ GTIQVD+NLP RF   YV+ H E+  PVMIHRA FGS+E
Sbjct: 517 AFYGPKLDFMVEDALGRAWQLGTIQVDYNLPERFELTYVDEHDERKRPVMIHRAPFGSLE 576

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
           RFIG++IE+  GN P WL+P Q  +  +    V+YAQE+A  L++  + +E D  +ET+ 
Sbjct: 577 RFIGVLIEHCGGNFPTWLAPTQVQIIPVGDDFVDYAQEVAATLRAEDVRVEIDTSDETVG 636

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
           YKIRE   +K+P +++ G  E    ++ +R         VS+ D +  
Sbjct: 637 YKIREAETQKVPYMLVVGGDEEEAGTVSVRSHADGPQGTVSVQDFLDR 684


>gi|307244344|ref|ZP_07526458.1| threonine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
 gi|306492310|gb|EFM64349.1| threonine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
          Length = 664

 Score =  637 bits (1642), Expect = e-180,   Method: Composition-based stats.
 Identities = 262/644 (40%), Positives = 401/644 (62%), Gaps = 16/644 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
             +K+   DG+       A+  DVA+ IS   A+  +  A++GK+  L+  + ++  ++ 
Sbjct: 23  DMLKIELRDGNFVEVENGASLLDVAKGISDGFARSVLVGAVDGKLESLNKKLDKDCKVDF 82

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
              ED     V RH+ AHI A+AV+ +WP+ ++AIGP IE+GFYYDFD +     ++L +
Sbjct: 83  YKFEDAEGKEVFRHTSAHIFAQAVKRLWPQAKLAIGPAIENGFYYDFDLDYRLVPEDLEK 142

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE +M++I+  D       +S E+A ++     E YKVE++  +P  E +++YRQGE+ D
Sbjct: 143 IEAEMKKIVKEDLRIEGFEVSKEEAIKMMAEIGEDYKVEMINDLPDGEIISMYRQGEFVD 202

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ ST ++K F KL  +AGAYWRGD N  ML R+YGT++  +++L  +L+ LEE+
Sbjct: 203 LCRGPHLESTKKIKAF-KLQSIAGAYWRGDENNKMLQRVYGTSFEKKKDLDAHLFMLEEA 261

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           +KRDHRK+ +E+ LF I ++G G   +  +G  +   L+ Y      +  Y EI TP +L
Sbjct: 262 KKRDHRKIGKELGLFMIPDEGPGFPLFLPRGTALKAALMKYWEEVHREAHYVEIETPIIL 321

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ LW+ SGHW  Y+ NM+ V+       D   +A+KPMNCPG +  +   L SYR+ P+
Sbjct: 322 NRKLWETSGHWFHYKENMYTVQI------DEEDYAIKPMNCPGAMLFYKSQLHSYRDFPM 375

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+ E G V+R+E SG+LHGLMRVR FTQDDAH++C  +Q+ +E  ++ NLI  +YK FGF
Sbjct: 376 RVGERGRVHRHELSGALHGLMRVRAFTQDDAHIYCLPDQIRSEVKEVINLIDKVYKQFGF 435

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
               V+LSTRPE  +G+D  W  AE+ ++G L+ +       +   V  G+GAFYGPK +
Sbjct: 436 SYH-VELSTRPEDSMGTDEEWAIAEDGLRGALEEMG------MEYRVNEGDGAFYGPKID 488

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           + LKD +GR WQCGT Q+D  LP RF+A YV    EK  PVM+HR   GSIERFIGI+IE
Sbjct: 489 FHLKDCLGRTWQCGTCQLDMQLPQRFDATYVGKDGEKHRPVMLHRVALGSIERFIGILIE 548

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           N+ G  P+WL+P Q  V +++    ++A+E+ + L    + +E D+R E + +KIRE  +
Sbjct: 549 NYAGKFPVWLAPCQVKVLSVSDKYNDFAKELQDKLFDAGIRVELDYRAEKVGFKIREAQL 608

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +KIP +++ G+KE     + +R        ++S+ D +  + K+
Sbjct: 609 EKIPYMLVVGEKEMESCLLSVRSRDEGELGQMSVEDFLAKINKQ 652


>gi|170287992|ref|YP_001738230.1| threonyl-tRNA synthetase [Thermotoga sp. RQ2]
 gi|238688803|sp|B1L7W6|SYT_THESQ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|170175495|gb|ACB08547.1| threonyl-tRNA synthetase [Thermotoga sp. RQ2]
          Length = 640

 Score =  637 bits (1642), Expect = e-180,   Method: Composition-based stats.
 Identities = 276/649 (42%), Positives = 406/649 (62%), Gaps = 26/649 (4%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            IK+  PDG  K +    T +++A+ +     KKA+   +NG++ DL  P+  +  + ++
Sbjct: 2   KIKVKLPDGKEKEYDRGITPAEIAKELG---VKKAIGAVVNGELWDLKRPIENDCELRLV 58

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWP--EVQVAIGPIIEDGFYYDFD-KEQPFSSDEL 119
           T EDP +    RH+ AHI+A+AV  I+    V++ IGP IE+GFYYDFD K    + ++L
Sbjct: 59  TLEDPEAPEFYRHTMAHILAQAVMRIYGKENVKLGIGPTIENGFYYDFDIKNGRLTEEDL 118

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IE++M++II  + P  ++ +S E+AR+L     + YK+E++E I   + VT+YRQGE+
Sbjct: 119 PKIEQEMKKIIKENLPIERKEISKEEARKL--FNNQPYKLELIEEI-EGDRVTIYRQGEF 175

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPH+ STG VK F KL+ V+GAYWRG    PML+R+YGTA+  +++L  YL FLE
Sbjct: 176 VDLCRGPHLPSTGIVKHF-KLLSVSGAYWRGSEKNPMLTRVYGTAFAKKEDLDNYLKFLE 234

Query: 240 ESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTP 297
           E+++RDHRKL   ++LF +  +   G+ F+  KG  +   L+ + R    +  Y+EI TP
Sbjct: 235 EAQRRDHRKLGPHLELFMLNTEYAPGMPFFLPKGVVVLNELMKFSRELHRERGYQEIFTP 294

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++++ LW+ SGHWD Y  NM+ ++      KD   +A+KPMNCPGH+ V+     SYR+
Sbjct: 295 LIMNEQLWKISGHWDHYAENMYFIE------KDEERYAVKPMNCPGHILVYKSRTVSYRD 348

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R  EFG V+R E SG LHGLMRVR FTQDDAH+FCT  Q+  E L + +LI +IY  
Sbjct: 349 LPLRFFEFGRVHRYERSGVLHGLMRVRSFTQDDAHIFCTPGQIEEEILGVLDLINTIYSQ 408

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF    V+LST PE  +G +A+W+ A   +K  L+         ++  V  GEGAFYGP
Sbjct: 409 FGFTY-RVELSTMPEDHMGDEAIWEKATTALKNALERAG------LSYKVNEGEGAFYGP 461

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K ++ ++D+IGR+WQC TIQ+DF +P +FN  Y+   +++   VMIHRA++GS+ERF GI
Sbjct: 462 KIDFHIRDSIGREWQCATIQLDFMMPEKFNVTYIGPDNKEHRAVMIHRAIYGSLERFFGI 521

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE+F G  P WL+PIQ  V  I+    + A++IA  +      +  D R ET+ Y+IR+
Sbjct: 522 LIEHFAGAFPTWLAPIQVAVIPISEKHNDGAEKIAKRISQEGFRVFFDNRRETLGYRIRQ 581

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
              +KIP +II GDKE     I +R       + V L   +  L  E L
Sbjct: 582 AQTQKIPYMIILGDKELESGKISVRTRTGKEIKDVDLEHFVETLRNEVL 630


>gi|253755215|ref|YP_003028355.1| threonyl-tRNA synthetase [Streptococcus suis BM407]
 gi|251817679|emb|CAZ55427.1| threonyl-tRNA synthetase [Streptococcus suis BM407]
          Length = 650

 Score =  637 bits (1642), Expect = e-180,   Method: Composition-based stats.
 Identities = 256/651 (39%), Positives = 404/651 (62%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+TFPDG+++ +    T  ++AESIS+SLAKKA+A   NGK+ D +  +  +G++EI+
Sbjct: 1   MIKITFPDGAVREYQAGVTTFEIAESISKSLAKKALAGKFNGKLIDTTRAIDEDGTLEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQ 121
            P+   +L ++RHS AH+ A+A + ++ ++++ +GP I+DGFYYD D      S+++L +
Sbjct: 61  MPDHDDALDILRHSAAHLFAQAARRLFSDIKLGVGPAIQDGFYYDTDNAAGQISNEDLPR 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWF 180
           I+++M +I+  + P  ++ ++ E+A E+F+   + YK+E++      E  +T+Y QGE+ 
Sbjct: 121 IQEEMMKIVKENFPSERREVTKEEALEIFK--NDPYKLELIHEHSDDEGGLTIYTQGEYV 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV STG+++ F +L+ VAGAYWRG S  PM+ R+YGTAW  +++L  YL   EE
Sbjct: 179 DLCRGPHVPSTGRIQIF-ELLNVAGAYWRGKSENPMMQRVYGTAWFDKKDLKAYLQMREE 237

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           +++RDHRKL +E+DLF I+++   G+ FW   G  I +TL  Y+  +++   Y+ + TP 
Sbjct: 238 AKERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRTLERYITDKELASGYQHVYTPP 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L++ SGHW+ Y  +MF          D   F L+PMNCP H+ V+ + ++SYREL
Sbjct: 298 LASVELYKTSGHWEHYSEDMFPTMDMG----DGEEFVLRPMNCPHHIQVYKNHVRSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           PVR+AE G ++R E SG+L GL RVR  T +D H+F T EQ+  E  K   LII +Y DF
Sbjct: 354 PVRIAELGMMHRYEKSGALTGLQRVREMTLNDGHIFVTPEQIQEEFKKALQLIIDVYADF 413

Query: 419 GFEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
                  +LS R      K   +D +W++A+ ++KG +D +       ++     GE AF
Sbjct: 414 NLNDYRFRLSYRDPEDKEKYYDNDEMWENAQRMLKGAMDEMG------VDYFEAEGEAAF 467

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K A+G +    TIQ+DF LP RF   Y+ +  E+  PVMIHR V  ++ERF
Sbjct: 468 YGPKLDIQVKTALGNEETLSTIQLDFLLPERFGLTYIGADGEEHRPVMIHRGVISTMERF 527

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
             I+IE +KG  P WL+P Q  +  I+  + ++YA ++A  L+   + +  D RNE + Y
Sbjct: 528 TAILIETYKGAFPTWLAPTQVTMIPISVEAHLDYAWKVAKELQDRGVRVHVDERNEKMQY 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR+    KIP  +I GDKE  + ++ +RR+GS  TQ  S+ + +  +  +
Sbjct: 588 KIRQSQTSKIPYQLIVGDKEMEDNAVNVRRYGSKATQTQSVSEFVDHILAD 638


>gi|308173840|ref|YP_003920545.1| threonyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|307606704|emb|CBI43075.1| threonyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
          Length = 642

 Score =  637 bits (1642), Expect = e-180,   Method: Composition-based stats.
 Identities = 270/644 (41%), Positives = 416/644 (64%), Gaps = 19/644 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I +TFP+G  K +    T  ++A+SIS  L K + A  +NG + DL   +  +  IE+ +
Sbjct: 6   IVITFPNGKQKEYEKGITLEEIAQSISPGLKKTSAAGKVNGSLYDLGRSIHEDAEIELCS 65

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +    L V+RH+ AH++A+AV+ ++P+V + IGP+IE+GFYYDFD +   +  +L  IE
Sbjct: 66  FQSEEGLEVMRHTAAHVLAQAVKRLYPKVCLGIGPVIENGFYYDFDMDDTITEKDLPVIE 125

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M  II+ +    ++ +S E+A +L     +  K+E+L  IP  + V++YRQ E+ DLC
Sbjct: 126 KEMNRIISENPKITREEISREEAEQL--FAHDPLKLELLADIPQTDTVSIYRQSEFVDLC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ S GQ+K F     V+GAYWRGDSN+ M+ RIYG A+ +++EL ++   L+E+EK
Sbjct: 184 RGPHLASVGQIKAFSLTH-VSGAYWRGDSNQKMMQRIYGKAFASKKELNRHFQLLKEAEK 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQ 302
           R+HRKL  E+ LF  +E+  G+ F+   G  I  TL S++R ++    Y+E+ TP +++Q
Sbjct: 243 RNHRKLGAELQLFMFSEEAPGMPFYLPNGQFIRNTLESFLRSKQDAYHYQEVRTPMMMNQ 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+QSGHWD Y+ NM+       +  D + FALKPMNCPGH+ +F   L+SYRELP+R+
Sbjct: 303 RLWEQSGHWDHYKENMYF------SEADQQRFALKPMNCPGHMLIFKERLRSYRELPIRM 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFG V+R+E SG+L+GL+RVR F QDDAH+F T EQ+ +E      LI  +Y  FGF  
Sbjct: 357 AEFGQVHRHEFSGALNGLLRVRSFCQDDAHIFVTPEQIESEIASALQLIHEVYTAFGFSY 416

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             ++LSTRPE  +GS+ LWD AE+ ++ VL           +     G+GAFYGPK +  
Sbjct: 417 -DIELSTRPEDYMGSEHLWDRAESALERVLKEQGY------DFRFNRGDGAFYGPKIDIH 469

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+ R  QC T+Q+DF +P +F+  Y++  ++K  PV+IHRAVFGS++RF+GI+ E++
Sbjct: 470 IKDALNRSHQCATVQLDFQMPEKFDLTYIDEKNQKVRPVVIHRAVFGSLDRFLGIITEHY 529

Query: 543 KGNLPLWLSPIQAIVTTITS-SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            G  PLWL+P+QA +  +++ +  + A+++   +K   +  E D R+E + YKIRE  +K
Sbjct: 530 GGAFPLWLAPVQAKIIPVSNTAHRDCAEQVHRQMKKAGIRAELDQRDEKLGYKIREAQMK 589

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           KIP I + GD+E    ++ +R++G   T + S+ D I  +  E+
Sbjct: 590 KIPYIAVVGDQECRHHTVHVRQYGQENTFEESVSDFISRIINET 633


>gi|304382923|ref|ZP_07365405.1| threonine--tRNA ligase [Prevotella marshii DSM 16973]
 gi|304335948|gb|EFM02196.1| threonine--tRNA ligase [Prevotella marshii DSM 16973]
          Length = 654

 Score =  637 bits (1642), Expect = e-180,   Method: Composition-based stats.
 Identities = 255/650 (39%), Positives = 402/650 (61%), Gaps = 19/650 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+TFPDGS++ +    TG  +A+SIS +LA++ ++ ++NGK  +L+ P+  + +  + 
Sbjct: 1   MIKITFPDGSVREYEKGVTGLQIAQSISPALAREVISCSVNGKTVELNRPINEDATFALY 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ--PFSSDELA 120
             ED        H+ AH++AEA+Q ++P +Q   GP IE+GF+YD   +     S ++  
Sbjct: 61  KWEDEEGKHTFWHTSAHLLAEALQELYPGIQFGFGPAIENGFFYDVMPKDGVAISENDFP 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IE+KM+E+  +D P +++ +S   A + F+   + YKVE ++   A   ++ Y QG + 
Sbjct: 121 KIEEKMRELAKKDEPVVRRDISKADALKEFKEDGQEYKVEHIDLDLADGTISTYTQGAFT 180

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ STG +K   K+  VAGA+WRGD+ R  ++RIYG  +  ++ L +YL  LEE
Sbjct: 181 DLCRGPHLVSTGAIK-AIKITSVAGAFWRGDAKREQMTRIYGITFPKKKMLDEYLVMLEE 239

Query: 241 SEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           ++KRDHRK+ +EM+LF  +   G G+  W  KG ++   L   +R+ +    Y+E+ TP 
Sbjct: 240 AKKRDHRKIGKEMELFMFSERVGKGLPIWLPKGTELRLRLQGMLRKIQKNYGYQEVITPH 299

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +  ++L+  SGH+  Y  + F       T ++   + LKPMNCP H  VF+   +SY++L
Sbjct: 300 IGSKNLYVTSGHYAHYGKDSFQ---PIHTPEEDEEYMLKPMNCPHHCEVFSWKPRSYKDL 356

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG+VYR E SG LHGL RVR FTQDDAH+FC  EQ+ +E L++ ++I +++K F
Sbjct: 357 PLRIAEFGTVYRYEKSGELHGLTRVRSFTQDDAHIFCRPEQVKSEFLRVMDIIQTVFKVF 416

Query: 419 GFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            F+ +  ++S R        +GSD +W+ +E  +      I+   +  +N  +  GE AF
Sbjct: 417 DFKNVEAQISLRDPNDREKYIGSDEVWEHSEQSI------IEACKEKGLNAKIAYGEAAF 470

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK ++++KDAIGR WQ GTIQVD+NLP RF   Y    + K  PVMIHRA FGS+ERF
Sbjct: 471 YGPKLDFMVKDAIGRRWQLGTIQVDYNLPQRFKLEYTADDNSKQTPVMIHRAPFGSMERF 530

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             ++IE+  G+ PLWL+P Q  +  I+    +YA+++A+ L S  +    D RNE I  K
Sbjct: 531 TAVLIEHTAGHFPLWLTPDQVAILPISEKFNDYARKVAHYLDSVGVRANIDERNEKIGRK 590

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IR++ IK++P ++I G+KEA+E  + +R+ G      +S+ D    + +E
Sbjct: 591 IRDNEIKRVPYMVIVGEKEAAEGLVSMRKQGGGEQATMSMEDFATRINEE 640


>gi|328553230|gb|AEB23722.1| threonyl-tRNA synthetase [Bacillus amyloliquefaciens TA208]
          Length = 638

 Score =  636 bits (1641), Expect = e-180,   Method: Composition-based stats.
 Identities = 271/644 (42%), Positives = 416/644 (64%), Gaps = 19/644 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           I +TFPDG  K +    T  ++A+SIS SL K + A  +NG + DL   +  +  IE+ +
Sbjct: 6   IVITFPDGKQKEYEKGITLEEIAQSISPSLKKTSAAGKVNGSLYDLGRSIHEDAEIELCS 65

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +    L V+RH+ AH++A+AV+ ++P+V + IGP+IE+GFYYDFD     +  +L  IE
Sbjct: 66  FQSEEGLEVMRHTAAHVLAQAVKRLYPKVCLGIGPVIENGFYYDFDMNDTITEKDLPAIE 125

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M  II+ +    ++ +S E+A +L     +  K+E+L  IP  E V++YRQ E+ DLC
Sbjct: 126 KEMNRIISENPKITREEISREEAEQL--FAHDPLKLELLADIPQTETVSIYRQSEFVDLC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ S GQ+K F     V+GAYWRGDSN+ M+ RIYG A+ +++EL ++   L+E+EK
Sbjct: 184 RGPHLASAGQIKAFSLTH-VSGAYWRGDSNQKMMQRIYGKAFASKKELNRHFQLLKEAEK 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQ 302
           R+HRKL  E+ LF  +E+  G+ F+   G  I  TL S++R ++    Y+E+ TP +++Q
Sbjct: 243 RNHRKLGAELQLFMFSEEAPGMPFYLPNGQFIRNTLESFLRSKQDAYHYQEVRTPMMMNQ 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+QSGHWD Y+ NM+       +  D + FALKPMNCPGH+ +F   L+SYRELP+R+
Sbjct: 303 RLWEQSGHWDHYKENMYF------SEADQQRFALKPMNCPGHMLIFKERLRSYRELPIRM 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFG V+R+E SG+L+GL+RVR F QDDAH+F T +Q+ +E      LI  +Y  FGF  
Sbjct: 357 AEFGQVHRHEFSGALNGLLRVRSFCQDDAHIFVTPDQIESEIASALQLIHEVYTAFGFSY 416

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             ++LSTRPE  +GS+ LWD AE+ ++ VL           +     G+GAFYGPK +  
Sbjct: 417 -DIELSTRPEDYMGSERLWDRAESALERVLKEQGY------DFRFNRGDGAFYGPKIDIH 469

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+ R  QC T+Q+DF +P +F+  Y++  ++K  PV+IHRAVFGS++RF+GI+ E++
Sbjct: 470 IKDALNRSHQCATVQLDFQMPEKFDLTYIDEKNQKVRPVVIHRAVFGSLDRFLGIITEHY 529

Query: 543 KGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            G  PLWL+P+QA +  ++++   + A+++   +K   +  E D R+E + YKIRE  IK
Sbjct: 530 GGAFPLWLAPVQAKIIPVSNTVHRDCAEQVHRQMKKAGIRAELDQRDEKLGYKIREAQIK 589

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           KIP I + GD+E    ++ +R++G   T + ++ D +  +  E+
Sbjct: 590 KIPYIAVVGDQECRHHTVHVRQYGQEDTFEENVSDFVSRIINET 633


>gi|302391179|ref|YP_003826999.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Acetohalobium
           arabaticum DSM 5501]
 gi|302203256|gb|ADL11934.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Acetohalobium
           arabaticum DSM 5501]
          Length = 639

 Score =  636 bits (1641), Expect = e-180,   Method: Composition-based stats.
 Identities = 280/647 (43%), Positives = 409/647 (63%), Gaps = 19/647 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           + + +T PDGS+  F    T  +VA  I   L K  +A  ++ K  D    + +   +EI
Sbjct: 2   NQVDITLPDGSVLEFDEEVTVREVAFEIGPRLGKATIAGKVDSKEVDADYVINDDVELEI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWP--EVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           IT +    L + RHS AHIMA+AV+ I+   EVQ+AIGP IEDGFYYDFD  + FS ++L
Sbjct: 62  ITIDSEEGLEIYRHSMAHIMAQAVERIYGSDEVQLAIGPSIEDGFYYDFDIPENFSDNDL 121

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IE +MQEII  D    +  LS ++A E  +   E YKVE+LE +   + V+ Y+QG++
Sbjct: 122 EEIEAEMQEIIEEDLEIERIELSKKEAVEKMKDLGEDYKVEMLEEL-EDDAVSFYQQGDF 180

Query: 180 FDLCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
            DLCRGPH+ STG+   + FKL+ VAGAYWRGD +  ML RIYGTA+  + +L ++L  L
Sbjct: 181 IDLCRGPHLTSTGKANAEGFKLLNVAGAYWRGDEDNKMLQRIYGTAFPNKSDLEEHLDRL 240

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
           EE++KRDHRKL +++DLF + ++G G  F+H KG  +   LI + + +  +  Y+EI TP
Sbjct: 241 EEAKKRDHRKLGQKLDLFSLHDEGKGFPFFHPKGMVVRNELIDFWKEEHRQAGYKEIKTP 300

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +L+Q LW+QSGHWD Y+ +M+       T  D    A+KPMNCPG + V+   ++SYR+
Sbjct: 301 VILNQDLWKQSGHWDHYKEDMYF------TEIDKEPHAVKPMNCPGGILVYKDKMRSYRD 354

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+ E G V+R+E SG+LHGLMRVR FTQDDAH+FC   Q+  E   +  L+  IY  
Sbjct: 355 LPIRMGELGLVHRHERSGTLHGLMRVRNFTQDDAHIFCLPSQIEEELTGVIKLVDRIYAP 414

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF    V+LST+P+K +GSD LWD A + ++  ++       + ++  V  G+GAFYGP
Sbjct: 415 FGFNY-RVELSTKPDKAMGSDELWDKATDALREAIEA------NDLDYKVNEGDGAFYGP 467

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K ++ L+D +GR WQCGT+Q+DF +P RF+  YV    E+  PVMIHRA+FGS+ERF+GI
Sbjct: 468 KIDFHLEDCLGRTWQCGTVQLDFQMPERFDLTYVGQDGEEHRPVMIHRAIFGSLERFMGI 527

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE++ G  P WL+PIQ  V  +T   ++YA ++   L    + +E D R E + YKIRE
Sbjct: 528 LIEHYAGAFPTWLAPIQTEVIPVTDDHLDYAYQVKEELADAGVRVEVDARQEKVGYKIRE 587

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
             ++++P ++I GD E  ++++ +R           L +    + KE
Sbjct: 588 AQVQQVPYMLIVGDDEIEDKTVSVRDRREGDLGAKDLAEFKAEIVKE 634


>gi|110834994|ref|YP_693853.1| threonyl-tRNA synthetase [Alcanivorax borkumensis SK2]
 gi|110648105|emb|CAL17581.1| Threonyl-tRNA synthetase [Alcanivorax borkumensis SK2]
          Length = 638

 Score =  636 bits (1641), Expect = e-180,   Method: Composition-based stats.
 Identities = 307/642 (47%), Positives = 430/642 (66%), Gaps = 13/642 (2%)

Query: 9   FPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDP 67
            PDG+   F    +  ++A  IS+ LAK+A+A   NG + D+  P+ +G ++EIIT +  
Sbjct: 7   LPDGANMEFEQPVSALEIAGRISKKLAKQALAAKANGNLIDVYLPIDDGATVEIITRDTD 66

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQ 127
            +L +IRH  AH+MA+AVQ ++P+ QV IGP I +GFYYDF ++ PF+ D+L  IEK+M 
Sbjct: 67  EALELIRHDAAHVMAQAVQELFPDTQVTIGPTIANGFYYDFHRDIPFTPDDLKTIEKRML 126

Query: 128 EIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPH 187
           EI+ R+    ++    ++A   F  K E +K EI+  +PA + V+LYRQG++ DLCRGPH
Sbjct: 127 EIVRRNEEIRREIWDRDEAVAFFLEKGEEFKAEIIRDLPADQEVSLYRQGDFIDLCRGPH 186

Query: 188 VRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHR 247
           + ST ++   FKL KVAGAYWRGD+++  L RIYGTAW  ++EL  YL  LEE+EKRDHR
Sbjct: 187 LPSTSKLGDGFKLTKVAGAYWRGDADKAQLQRIYGTAWRDKKELNAYLKQLEEAEKRDHR 246

Query: 248 KLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ 306
           KLA+EM LFHI ++  G +FWH KGW++ + L +Y+R K++   YEE++TPQ++D+ LW+
Sbjct: 247 KLAKEMGLFHIQQEAVGSMFWHPKGWRMRKNLENYIRGKMEKGGYEEVSTPQMMDRILWE 306

Query: 307 QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFG 366
           QSGHWD Y  +MF V        D +  A+KPMNCPGHV +F  G+ SYR+LP+RL EF 
Sbjct: 307 QSGHWDKYGEDMFTV-----CTHDHKEMAVKPMNCPGHVQIFKQGITSYRDLPIRLGEFT 361

Query: 367 SVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK 426
           +++RNE  G+LHGLMR R F+QDDAH+FCT+EQ+  E      ++  +Y DFGF+   +K
Sbjct: 362 TLFRNEAHGALHGLMRARSFSQDDAHIFCTEEQVNEETAGFIKMLREVYADFGFDSFRIK 421

Query: 427 LSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDA 486
            S RP+ R GSD  WD AE  ++  ++++       +   +  GEGAFYGPK E++L+DA
Sbjct: 422 FSDRPDNRAGSDETWDKAEGALRSAVESLG------LECELNPGEGAFYGPKLEFVLRDA 475

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNL 546
           IGRDWQCGT+QVDF LP R +A YV     +  PVM+HRAV GS+ERF+GI+IE+  G+L
Sbjct: 476 IGRDWQCGTLQVDFVLPDRLDAEYVAEDGSRQRPVMLHRAVLGSLERFLGILIESTAGHL 535

Query: 547 PLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPII 606
           PLWL+P    V TIT+SA EYA  +   L +  +  E D RNE I +K+REHS  K P I
Sbjct: 536 PLWLAPRPVAVCTITNSADEYATTVQQKLVAAGIPAELDIRNEKIGFKVREHSRAKTPRI 595

Query: 607 IICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
            + G++EA    + IR  GS  T+ V L +A+  L + +  P
Sbjct: 596 WVIGEQEAQHNQVAIRTLGSQATETVDLDEAVAALAEATRLP 637


>gi|167763511|ref|ZP_02435638.1| hypothetical protein BACSTE_01885 [Bacteroides stercoris ATCC
           43183]
 gi|167698805|gb|EDS15384.1| hypothetical protein BACSTE_01885 [Bacteroides stercoris ATCC
           43183]
          Length = 646

 Score =  636 bits (1640), Expect = e-180,   Method: Composition-based stats.
 Identities = 261/649 (40%), Positives = 393/649 (60%), Gaps = 19/649 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+TFPDGS++ +    TG  +AESIS  LA+  +A  +NG+V DL  P+  +  + + 
Sbjct: 1   MIKITFPDGSVREYNEGVTGLQIAESISSRLAQDVLACGVNGEVYDLGRPISEDAEVVLY 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
             ED +      H+ AH++AEA+Q ++P +Q  IGP IE+GFYYD D  E      +L  
Sbjct: 61  KWEDEQGKHAFWHTSAHLLAEALQELYPGIQFGIGPAIENGFYYDVDPGETAIKEADLPA 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEKKM E+ A+    +++ +S   A ++F  + E YK E++  +    ++T Y QG + D
Sbjct: 121 IEKKMAELAAKKEAVVRESISKTDALKMFGDRGETYKCELISEL-EDGHITTYTQGAFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ +T  +K   KL  VAGAYWRG  +R M++RIYG  +  ++ L +YL  LEE+
Sbjct: 180 LCRGPHLMTTAPIK-AIKLTSVAGAYWRGQEDRKMMTRIYGITFPKKKMLDEYLVLLEEA 238

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           +KRDHRK+ +EMDLF  ++    G+  W  KG  +   L  ++RR + + DY+E+  P +
Sbjct: 239 KKRDHRKIGKEMDLFMFSDTVGKGLPMWLPKGAALRIRLQEFLRRIQARYDYQEVMCPPI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            ++ L+  SGH+  Y  + F       T ++   + LKPMNCP H  ++ +  +SY++LP
Sbjct: 299 GNKLLYITSGHYAKYGKDSFQ---PIHTPEEGEEYFLKPMNCPHHCMIYKNSPRSYKDLP 355

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +RLAEFG+V R E SG LHGL RVR FTQDDAH+FC  +Q+ +E L++ ++I  +++   
Sbjct: 356 LRLAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKDEFLRVMDIISIVFQSMH 415

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           FE    ++S R     EK +GSD  W+ AE  +    +      +  +   V  GE AFY
Sbjct: 416 FENFEAQISLRDKVNREKYIGSDENWEKAEQAIIEACE------EKGLKARVEYGEAAFY 469

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDAIGR WQ GTIQVD+NLP RF   Y  + ++K  PVMIHRA FGS+ERF+
Sbjct: 470 GPKLDFMVKDAIGRRWQLGTIQVDYNLPERFQLEYTGADNQKHRPVMIHRAPFGSMERFV 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE+  G  PLWL+P Q  +  I+    +YAQE+ + LK + +    D RNE I  KI
Sbjct: 530 AVLIEHTAGKFPLWLTPDQVAILPISEKFNDYAQEVKDYLKRYDVRAIVDERNEKIGRKI 589

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R++ +K+IP ++I G+KEA  R + +R+ G      +   D    + +E
Sbjct: 590 RDNEMKRIPYMLIVGEKEAENREVSVRKQGEGDQGTMKFEDFAKKVNEE 638


>gi|149371736|ref|ZP_01891152.1| threonine--tRNA ligase (threonine tRNA synthetase) [unidentified
           eubacterium SCB49]
 gi|149355363|gb|EDM43923.1| threonine--tRNA ligase (threonine tRNA synthetase) [unidentified
           eubacterium SCB49]
          Length = 647

 Score =  636 bits (1640), Expect = e-180,   Method: Composition-based stats.
 Identities = 266/656 (40%), Positives = 396/656 (60%), Gaps = 20/656 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+T PDGSIK     +T  DVA SIS  LA+  ++   NG+  + +  +  +G++ + 
Sbjct: 1   MIKVTLPDGSIKEMENGSTVMDVAMSISEGLARNVLSATYNGETVETATTLTEDGNLVLF 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
           T  +        HS AHI+A+A++ ++P V++ IGP IE+GFYYD D    PF   +LA 
Sbjct: 61  TWNNDEGKKAFWHSSAHILAQALEELYPGVKLTIGPAIENGFYYDVDFGNTPFVEKDLAD 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +EKKM EI     PF  +  S   A + ++ +   YKVE++E++     +T      + D
Sbjct: 121 VEKKMLEIARGKHPFTLRATSKADALDFYKKQDNEYKVELIENL-EDGTITFCDHDSFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG H+  TG VK   KLM +AGAYWRGD N   L+RIYG  +  Q+EL +YL  LEE+
Sbjct: 180 LCRGGHLPHTGFVK-AIKLMSIAGAYWRGDENNKQLTRIYGITFPKQKELKEYLALLEEA 238

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           +KRDHRKL +E++LF  ++    G+  W  KG  + + L +++++ + K  YE + TP +
Sbjct: 239 KKRDHRKLGKELELFTFSQKVGQGLPLWLPKGAALRERLENFLKKAQKKAGYEMVVTPHI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            ++ L+  SGH+  Y  + F V    +T  D   F LKPMNCP H  ++N    SY++LP
Sbjct: 299 GNKELYVTSGHFAKYGEDSFQV---INTPNDGEEFMLKPMNCPHHCEIYNAKPMSYKDLP 355

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
            RLAEFG+VYR E SG LHGL RVRGFTQDDAH+FCT +Q+  E  K+ +L++ ++   G
Sbjct: 356 KRLAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCTPDQLDEEFKKVIDLVLYVFGSLG 415

Query: 420 FEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           FEK   ++S R      K +G  + W+ AEN +   +          ++  V  GE AFY
Sbjct: 416 FEKFTTQVSIRDMSKPEKYIGDVSTWEKAENAILNAVKD------KGLDYIVEEGEAAFY 469

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDA+GR WQ GTIQVD+NLP RF   Y  S +E   PVMIHRA FGS+ERF+
Sbjct: 470 GPKLDFMVKDALGRSWQLGTIQVDYNLPERFELTYKGSDNELHRPVMIHRAPFGSLERFV 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            I++E+  GN PLWL P Q  + +++    EYA+++ NLL++H +    D RNETI  KI
Sbjct: 530 AILLEHTGGNFPLWLMPEQVAILSLSEKYEEYAEKVLNLLENHDIRALVDNRNETIGKKI 589

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           RE  + KIP ++I G++E ++ +I +R+        +++     ++T E++  + +
Sbjct: 590 REAEMNKIPYMLILGEQEENDGTISVRKHSEGDLGTMTVEAFGNMIT-EAIAKEIK 644


>gi|313887217|ref|ZP_07820913.1| threonine--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I]
 gi|312923446|gb|EFR34259.1| threonine--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I]
          Length = 650

 Score =  636 bits (1640), Expect = e-180,   Method: Composition-based stats.
 Identities = 259/652 (39%), Positives = 392/652 (60%), Gaps = 19/652 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M   I +T PDGS+K      T  D+A SIS  LA++ +A   +GK+ D+  P+  +  I
Sbjct: 1   MSDQIHITLPDGSVKEMKQGVTPLDIANSISERLAQEVLAAECDGKLIDVRTPLMHDAHI 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDE 118
           +++  ED        H+ AH+MAEA+Q ++P VQ  IGP I+ GFYYD D  ++   S++
Sbjct: 61  KLLKWEDEGGKHAFWHTSAHLMAEALQELYPGVQFGIGPAIDAGFYYDIDTGDEVIKSED 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L +IE KM E+  R     ++ +S   A + F+   + YK+E++  +     +T Y QG 
Sbjct: 121 LPKIEAKMLELARRKETLERKAISKSDALDFFKKTGQGYKLELINDL-EDGTITTYTQGA 179

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + DLCRGPH+ ST  +K   KL+ VAGAYWRGD  R  L+RIYG  +  ++ L +YL  L
Sbjct: 180 FTDLCRGPHLPSTAPIK-AVKLLSVAGAYWRGDETRKQLTRIYGITFPKKKLLDEYLALL 238

Query: 239 EESEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINT 296
           EE++KRDHRK+ +E++LF      G G+  W  +G ++   L  +++R + +  Y+++ T
Sbjct: 239 EEAKKRDHRKIGKELELFAFSQRVGQGLPLWLPRGTQLRLKLEDFLKRIQKRYGYQQVMT 298

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P + +  L++ SGH+  Y A+ F V     T ++   F LKPMNCP H  ++     SYR
Sbjct: 299 PHIGNVELYKTSGHYAKYGADSFQVIT---TPQEGEAFMLKPMNCPHHCEIYRLKPHSYR 355

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +LPVRLAEFG+VYR E SG LHGL RVRGFTQDDAH+FC  +Q+  E LK+ ++I  I++
Sbjct: 356 DLPVRLAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCRPDQVKEEFLKVMDIIFIIFR 415

Query: 417 DFGFEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
              FE    ++S R +    K +GS+  WD AE  +      I+   +  +   V   E 
Sbjct: 416 ALDFENFEAQISLRSQTDRSKYIGSEENWDRAEQAI------IEACQEAGLPAHVEYDEA 469

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           AFYGPK ++++KDA+GR WQ GTIQVD+NLP RF+  Y    ++K  PVMIHRA FGS+E
Sbjct: 470 AFYGPKLDFMVKDALGRRWQLGTIQVDYNLPERFDLEYTGEDNQKHRPVMIHRAPFGSME 529

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
           RF+ ++IE+  G  PLWL+P Q ++  ++    EYA E+A  L  H +S+  D RNE + 
Sbjct: 530 RFVAVLIEHTAGKFPLWLAPDQVVILPVSERFNEYANEVAAALSEHDISVSIDDRNEKVG 589

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            KIR++ +K+IP ++I G++E ++ ++ +R+ G        +      + +E
Sbjct: 590 RKIRDNELKRIPYMLIVGEQEQADGTVSVRKQGEGDVGTEKISTFAERILQE 641


>gi|15673893|ref|NP_268068.1| theronyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
 gi|281492524|ref|YP_003354504.1| threonyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
 gi|22654138|sp|Q9CED2|SYT_LACLA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|12724948|gb|AAK06009.1|AE006421_2 theronyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
 gi|281376188|gb|ADA65679.1| Threonyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
 gi|326407464|gb|ADZ64535.1| threonyl-tRNA synthetase [Lactococcus lactis subsp. lactis CV56]
          Length = 646

 Score =  636 bits (1639), Expect = e-180,   Method: Composition-based stats.
 Identities = 257/651 (39%), Positives = 396/651 (60%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEII 62
            IK+TFPDG++K F    T  ++A+SIS SLAKK +A  +NGK+ D +  + E S  EI+
Sbjct: 1   MIKITFPDGNVKEFEAGVTTFEIAKSISPSLAKKTLAGKVNGKLIDATRAINEDSNFEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQ 121
           TP+   +L ++RHS AH+ A+A +  +P++ + +GP I+DGFYYD D E    S+D+LA 
Sbjct: 61  TPDHEDALGILRHSAAHLFAQAAKRHFPDIHLGVGPAIQDGFYYDTDNEAGQISNDDLAT 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWF 180
           IE +M++I+  +    ++ +S E+A+E+     + YK+E++E     E  +T+Y QGE+ 
Sbjct: 121 IEAEMKKIVKENFKSERKEVSKEEAKEI--FANDPYKLELIEEHNEDEGGLTIYTQGEYT 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV STG +K FF L+ VAGAYWRG+S+  M+ RIYGTAW T++EL + L   EE
Sbjct: 179 DLCRGPHVPSTGVIK-FFHLLNVAGAYWRGNSDNKMMQRIYGTAWFTKEELEENLKLREE 237

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           +++RDHRKL RE+DLF    +   G  +W   G  I + +  ++  +++K+ Y+ + TP 
Sbjct: 238 AKERDHRKLGRELDLFFNDAELGAGTAYWLPAGATIRRIIERFVVDQEVKNGYQHVITPV 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +++ + ++QSGHW  Y  +M+          D     L+PMNCP H+A++ H + SYREL
Sbjct: 298 MMNLNTYKQSGHWQHYHEDMYPPMDMG----DGEEMELRPMNCPSHIAIYKHHVHSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG ++R E SG+L GL RVR  T +D H F   EQ+  E  KI  LI+ +Y+DF
Sbjct: 354 PIRIAEFGMMHRYEKSGALSGLQRVREMTLNDGHTFVMLEQVQEEFSKILQLIMDMYRDF 413

Query: 419 GFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           G      +LS R  K        D +W+ ++ ++K  +D +       ++     GE AF
Sbjct: 414 GINDYSFRLSYRDPKDTVKYFPDDEMWEKSQAMLKATMDDMN------LDYVEAEGEAAF 467

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K A+G +    TIQ+DF  P  F+  Y+ +  EK  PVMIHR V  ++ERF
Sbjct: 468 YGPKLDIQVKTALGNEETLSTIQLDFLNPENFDISYIGADGEKHRPVMIHRGVISTLERF 527

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINY 593
           I  +IE +KG  P WL+P QA +  + +    +YA +I   L+     +  D  NE + +
Sbjct: 528 IAYLIEVYKGAFPTWLAPTQATIIPVNNEIHADYAWKIQRELQDKGFRVVVDEANEKMGW 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR+    KIP  I+ GD+E ++ ++ IRR+GS  T+ + L + I  ++ +
Sbjct: 588 KIRQSQTHKIPYQIVIGDQEQADGTVNIRRYGSKETKVIPLEEFIENISAD 638


>gi|329954516|ref|ZP_08295607.1| threonine--tRNA ligase [Bacteroides clarus YIT 12056]
 gi|328527484|gb|EGF54481.1| threonine--tRNA ligase [Bacteroides clarus YIT 12056]
          Length = 646

 Score =  636 bits (1639), Expect = e-180,   Method: Composition-based stats.
 Identities = 261/649 (40%), Positives = 394/649 (60%), Gaps = 19/649 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+TFPDGS++ +    TG  +AESIS  LA+  +A  +NG++ DL  P+  +  + + 
Sbjct: 1   MIKITFPDGSVREYNEGVTGLQIAESISSRLAQDVLACGVNGEIYDLGRPINEDAEVVLY 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
             ED +      H+ AH++AEA+Q ++P +Q  IGP IE+GFYYD D  E      +L  
Sbjct: 61  KWEDEQGKHAFWHTSAHLLAEALQELYPGIQFGIGPAIENGFYYDVDPGEAAIKEADLPA 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEKKM E++AR    +++ +S   A ++F  + E YK E++  +    ++T Y QG + D
Sbjct: 121 IEKKMAELVARKEGVVRESISKTDALKMFGDRGETYKCELISEL-EDGHITTYTQGAFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ +T  +K   KL  VAGAYWRG  +R M++RIYG  +  ++ L +YL  LEE+
Sbjct: 180 LCRGPHLMTTAPIK-AIKLTSVAGAYWRGQEDRKMMTRIYGITFPKKKMLDEYLVLLEEA 238

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           +KRDHRK+ +EMDLF  ++    G+  W  KG  +   L  ++RR + + DY+E+  P +
Sbjct: 239 KKRDHRKIGKEMDLFMFSDTVGKGLPMWLPKGAALRIRLQEFLRRIQARYDYQEVMCPPI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            ++ L+  SGH+  Y  + F       T ++   + LKPMNCP H  ++ +  +SY++LP
Sbjct: 299 GNKLLYITSGHYAKYGKDSFQ---PIHTPEEGEEYFLKPMNCPHHCMIYKNSPRSYKDLP 355

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +RLAEFG+V R E SG LHGL RVR FTQDDAH+FC  +Q+ +E L++ ++I  +++   
Sbjct: 356 LRLAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKDEFLRVMDIISIVFQSMH 415

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           FE    ++S R     EK +GSD  W+ AE  +    +      +  +   V  GE AFY
Sbjct: 416 FENFEAQISLRDKVNREKYIGSDENWEKAEQAIIEACE------EKGLKAKVEYGEAAFY 469

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDAIGR WQ GTIQVD+NLP RF   Y  + ++K  PVMIHRA FGS+ERF+
Sbjct: 470 GPKLDFMVKDAIGRRWQLGTIQVDYNLPERFQLEYTGADNQKHRPVMIHRAPFGSMERFV 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE+  G  PLWL+P Q  +  I+    +YAQE+ + LK + +    D RNE I  KI
Sbjct: 530 AVLIEHTAGKFPLWLTPDQVAILPISEKFNDYAQEVKDYLKRYDVRAIVDERNEKIGRKI 589

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R++ +K+IP ++I G+KEA  R + +R+ G      +   D    + +E
Sbjct: 590 RDNEMKRIPYMLIVGEKEAENREVSVRKQGEGDQGTMKFEDFAKKVNEE 638


>gi|125624939|ref|YP_001033422.1| ThrS protein [Lactococcus lactis subsp. cremoris MG1363]
 gi|166223350|sp|A2RN48|SYT_LACLM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|124493747|emb|CAL98736.1| ThrS protein [Lactococcus lactis subsp. cremoris MG1363]
 gi|300071738|gb|ADJ61138.1| threonyl-tRNA synthetase [Lactococcus lactis subsp. cremoris
           NZ9000]
          Length = 646

 Score =  635 bits (1638), Expect = e-180,   Method: Composition-based stats.
 Identities = 259/651 (39%), Positives = 394/651 (60%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEII 62
            IK+TFPDG+IK F    T  ++A+SIS SLAKK +A  +NGK+ D +  + E S  EI+
Sbjct: 1   MIKITFPDGNIKEFESGVTTFEIAKSISPSLAKKTLAGKVNGKLIDATRAINEDSNFEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQ 121
           TP+   +L ++RHS AH+ A+A +  +P + + +GP I+DGFYYD D E    S+D+LA 
Sbjct: 61  TPDHEDALGILRHSAAHLFAQAAKRHFPNIHLGVGPAIQDGFYYDTDNEAGQISNDDLAT 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWF 180
           IE +M++I+  +    ++ +S E+A+E+     + YK+E++E     E  +T+Y QGE+ 
Sbjct: 121 IEAEMKKIVKENFKSERKEVSKEEAKEI--FASDPYKLELIEEHNEDEGGLTIYTQGEYT 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV STG +K FF L+ VAGAYWRG+S+  M+ RIYGTAW +++EL   L   EE
Sbjct: 179 DLCRGPHVPSTGVIK-FFHLLNVAGAYWRGNSDNKMMQRIYGTAWFSKEELEANLKLREE 237

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           +++RDHRKL RE+DLF    +   G  +W   G  I + +  ++  +++K+ Y+ + TP 
Sbjct: 238 AKERDHRKLGRELDLFFNDAELGAGTAYWLPAGATIRRIIERFVVDQEVKNGYQHVITPV 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +++ + ++QSGHW  Y  +M+          D     L+PMNCP H+A++ H + SYREL
Sbjct: 298 MMNLNTYKQSGHWQHYHEDMYPPMDMG----DGEEMELRPMNCPSHIAIYKHHVHSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG ++R E SG+L GL RVR  T +D H F   EQ+  E  KI  LI+ +Y+DF
Sbjct: 354 PIRIAEFGMMHRYEKSGALSGLQRVREMTLNDGHTFVMLEQVQEEFSKILQLIMDMYRDF 413

Query: 419 GFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           G      +LS R  K        D +W+ ++ ++K  +D +K      ++     GE AF
Sbjct: 414 GINDYSFRLSYRDPKDTVKYFPDDEMWEKSQAMLKATMDDMK------LDYVEAEGEAAF 467

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K A+G +    TIQ+DF  P  F+  YV +  EK  PVMIHR V  ++ERF
Sbjct: 468 YGPKLDIQVKTALGNEETLSTIQLDFLNPENFDISYVGADGEKHRPVMIHRGVISTLERF 527

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINY 593
           I  +IE +KG  P WL+P QA +  + +    +YA +I   L+     +  D  NE + +
Sbjct: 528 IAYLIEVYKGAFPTWLAPTQATIIPVNNEIHADYAWKIQRELQDKGFRVVVDEANEKMGW 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR+    KIP  I+ GD+E ++ ++ IRR+GS  T+ +   D I  ++ +
Sbjct: 588 KIRQSQTHKIPYQIVIGDQEQADGTVNIRRYGSKETEVIPFEDFIEKISAD 638


>gi|257067150|ref|YP_003153406.1| threonyl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
 gi|256799030|gb|ACV29685.1| threonyl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
          Length = 640

 Score =  635 bits (1638), Expect = e-180,   Method: Composition-based stats.
 Identities = 264/645 (40%), Positives = 396/645 (61%), Gaps = 17/645 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEII 62
            IK+  PDGS+K +       DV + IS  L + AV   +NG++   ++P+ E S   ++
Sbjct: 1   MIKIKLPDGSVKEYESGVLVGDVTKDISMGLFRAAVGAVVNGEIKGFAEPIEEDSDFRVV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
             ED     +  H+ +H+MA A++ ++PE + AIGP I+DGFYYD D E  F+ ++L +I
Sbjct: 61  KFEDKEGKEIFWHTSSHVMAAAIKEMYPETKFAIGPAIDDGFYYDMDLEHRFTPEDLEKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE-WFD 181
           EKKM EI  RD    +  +S  +A E F+ + + YKVE++E +P  E +TLY+ G+ + D
Sbjct: 121 EKKMLEIAKRDLKLERVEISRAEALEKFKEEGQDYKVELIEDLPEDEKITLYKMGDAFTD 180

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ ST  +K   KL  +AGAYWRGDS+R ML RIYG ++   ++L +Y    +E 
Sbjct: 181 LCRGPHLLSTKAIK-AVKLKTIAGAYWRGDSDRQMLQRIYGISFEKAKQLEEYEELQKEI 239

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
           EKRDHRK+ REM+LF   E+G G  F+H  G  +   L+ +    + +  Y EI TP +L
Sbjct: 240 EKRDHRKIGREMNLFTFHEEGPGFPFFHPNGMILMNELLGWWTDVLNENGYGEIKTPLIL 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ LW +SGHWD Y+ NM+  K       D   +A+KPMNCPG V  +     SYR+LP+
Sbjct: 300 NEDLWHRSGHWDHYKENMYFTKI------DGEAYAIKPMNCPGSVLTYASNQHSYRDLPI 353

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLAE+G V+R+E SG+LHGL RVR FTQDDAHV+C   Q+  E  ++ +L   +Y  FGF
Sbjct: 354 RLAEYGQVHRHELSGTLHGLFRVRTFTQDDAHVYCLPSQIKEEVYRMIDLADLLYSTFGF 413

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           +  + +LSTRP+  +G    WD AE+ +K  L+      +  I   +  G+GAFYGPK +
Sbjct: 414 KYTI-ELSTRPDDFMGDIKDWDFAEDQLKKALE------ERGIEYEINPGDGAFYGPKID 466

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           + L DA  R+WQCGTIQ+DF LP  F+  Y++ + EK  PVM+HRA+ GSIERFIG++ E
Sbjct: 467 FHLLDAAKREWQCGTIQLDFQLPQNFDLTYIDENGEKQRPVMLHRALLGSIERFIGVLTE 526

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +F G  PLWL+P Q  +  ++   ++Y +++   +K     +  D+R+E + YKIR+  +
Sbjct: 527 HFAGRFPLWLNPQQVEIIPVSDKFIDYCEDLKEKIKEAGFRVNIDYRSEGVGYKIRQAQL 586

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
            +   +++ G+KE +   + +R      T  VS+ + I  ++KE 
Sbjct: 587 MRTNYMLVVGEKEETSGKLTVRNRDGEETADVSVDEFIEKISKER 631


>gi|198275235|ref|ZP_03207766.1| hypothetical protein BACPLE_01394 [Bacteroides plebeius DSM 17135]
 gi|198271818|gb|EDY96088.1| hypothetical protein BACPLE_01394 [Bacteroides plebeius DSM 17135]
          Length = 646

 Score =  635 bits (1638), Expect = e-180,   Method: Composition-based stats.
 Identities = 255/649 (39%), Positives = 389/649 (59%), Gaps = 19/649 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            +K+TFPDGS++ +    TG  +AESIS  LA+  +A  +NG+  DL+ P+  + +  + 
Sbjct: 1   MVKITFPDGSVREYNEGVTGLQIAESISSRLAQDVLACGVNGETVDLNRPINEDANFVLY 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
             ED +      H+ AH++AEA+Q ++P +Q  IGP IE+GFYYD D  E      +L  
Sbjct: 61  KWEDEQGKHAFWHTSAHLLAEALQELYPGIQFGIGPAIENGFYYDVDPGEAVIKEGDLPA 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEKKM E+ A+    ++Q +S E A ++F  + E YK E++  +    +++ Y QG + D
Sbjct: 121 IEKKMAELAAKKEELVRQSISKEDALKMFGDRGETYKCELISEL-EDGHISTYTQGAFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ ST  +K   KL+ VAGAYWRG  +R  ++RIYG  +  ++ L +YL  LEE+
Sbjct: 180 LCRGPHLLSTAPIK-AIKLLSVAGAYWRGQEDRKQMTRIYGITFPKKKMLDEYLVMLEEA 238

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           +KRDHRK+ +EMDLF  ++    G+  W  KG  +   L  ++RR + + DY+E+  P +
Sbjct: 239 KKRDHRKIGKEMDLFMFSDTVGKGLPMWLPKGTALRIRLQDFLRRIQARYDYQEVMCPPI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            ++ L+  SGH+  Y  + F       T ++   + LKPMNCP H  ++ +  +SYR+LP
Sbjct: 299 GNKLLYVTSGHYAKYGKDAFQ---PIHTPEEGEEYFLKPMNCPHHCMIYKNSPRSYRDLP 355

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AEFG+V R E SG LHGL RVR FTQDDAH+FC  +Q+ +E L++ ++I  ++   G
Sbjct: 356 LRIAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKDEFLRVMDIISIVFTSMG 415

Query: 420 FEKIMV----KLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
            E        +     EK +GSD  W+ AE  +    +      +  +   V  GE AFY
Sbjct: 416 LENFEAQISLRDKENREKYIGSDENWEKAEQAIVEACE------EKGLKAKVEYGEAAFY 469

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDAIGR WQ GTIQVD+NLP RF   Y+ S ++K  PVMIHRA FGS+ERF+
Sbjct: 470 GPKLDFMVKDAIGRRWQLGTIQVDYNLPERFQLEYMGSDNQKHRPVMIHRAPFGSMERFV 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE+  G  PLWL+P Q  +  I+    +YA ++   LK + +    D RNE I  KI
Sbjct: 530 AVLIEHTAGKFPLWLTPDQVAILPISEKFNDYADKVRMELKKYDVRALVDDRNEKIGRKI 589

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R++ +K+IP ++I G+KEA    + +R+ G      + + +    + +E
Sbjct: 590 RDNEMKRIPYMLIVGEKEAENGEVAVRKQGEGDKGTMKIEEFAKNIAEE 638


>gi|73667547|ref|YP_303563.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Ehrlichia canis
           str. Jake]
 gi|123745825|sp|Q3YQP0|SYT_EHRCJ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|72394688|gb|AAZ68965.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Ehrlichia canis
           str. Jake]
          Length = 633

 Score =  635 bits (1638), Expect = e-180,   Method: Composition-based stats.
 Identities = 311/640 (48%), Positives = 430/640 (67%), Gaps = 15/640 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEII 62
            I + F +   K F     G DV   +   L  KA+AV +NG+  DLS  + E  + E+I
Sbjct: 1   MINIYFNNNLCKQFHRGIKGYDVVADLFPELKNKAIAVKVNGESYDLSREITENCTFEVI 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T      L +IRH  AHIMA+AV+ I+P+ Q+ IGP I+DGFYYDF  E  FSS++L  I
Sbjct: 61  TTNSEEGLEIIRHDTAHIMAQAVKEIFPDTQITIGPTIKDGFYYDFATEHNFSSNDLEII 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EKKM EII ++  F+++  + E+A + F S  E YKV+I+  IP  EN+T+Y+QG + DL
Sbjct: 121 EKKMIEIINKNESFIREVWTREEAIKFFSSIGEDYKVKIISKIPNNENITVYKQGNFIDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH  ST   K F KL KV+G+YW+G+S+   L RIYGTAW  ++EL  YL  L E E
Sbjct: 181 CRGPHAPSTKTSKSF-KLTKVSGSYWQGNSSNEKLQRIYGTAWRNEEELKSYLNNLIEIE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD 301
           KRDHRK+ +E++LFHI  +  G +FWH+KGW I++T+ +Y+R+K++ + Y E+ TP +L+
Sbjct: 240 KRDHRKIGKELELFHIQNEACGQVFWHKKGWTIYRTIENYIRKKLETNGYIEVKTPMLLN 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW++SGHWD +R NMF  +  D      +  A+KPMNCP H+ +FN  ++SYR+LP+R
Sbjct: 300 KELWEKSGHWDKFRENMFLSEAED------KVLAIKPMNCPCHIQIFNSKIRSYRDLPIR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AEFG  +R E SG+LHGLMRVRGFTQDDAH+FCT+ Q+ +E LK  NL++ +YKDFGF 
Sbjct: 354 MAEFGICHRYEASGALHGLMRVRGFTQDDAHIFCTESQVISEALKFCNLLMEVYKDFGFT 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            I+VK S RPE R GSD  WD AE+ +K  ++         +N  +  G+GAFYGPK E+
Sbjct: 414 NILVKFSDRPENRAGSDETWDRAESALKKSVEAAN------LNYVLNPGDGAFYGPKLEF 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
           +LKDAIGR+WQCGT+Q+DF LP R  A+YV S  +K HP+M+HRA+ G+ ERFIGI+IE+
Sbjct: 468 VLKDAIGREWQCGTLQMDFVLPERLGAYYVGSDGKKHHPIMLHRAILGTFERFIGILIEH 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G  P+WL+P Q  + TI+  ++EYA  +    + H++ +E D  NE INYKIR H  K
Sbjct: 528 HSGKFPIWLAPTQLSILTISEESIEYANSLKTKAEEHNIRVELDATNEKINYKIRNHIHK 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           KIP+  I G KE +E S+ IR   S T Q + +  A+  L
Sbjct: 588 KIPVFWIVGKKEVNENSVSIRYLESNTQQVMPIDKALKTL 627


>gi|116512847|ref|YP_811754.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Lactococcus
           lactis subsp. cremoris SK11]
 gi|122939966|sp|Q02WN1|SYT_LACLS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|116108501|gb|ABJ73641.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Lactococcus
           lactis subsp. cremoris SK11]
          Length = 646

 Score =  635 bits (1638), Expect = e-180,   Method: Composition-based stats.
 Identities = 259/651 (39%), Positives = 393/651 (60%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEII 62
            IK+TFPDG+IK F    T  ++A+SIS SLAKK +A  +NGK+ D +  + E S  EI+
Sbjct: 1   MIKITFPDGNIKEFESGVTTFEIAKSISPSLAKKTLAGKVNGKLIDATRAINEDSDFEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQ 121
           TP+   +L ++RHS AH+ A+A +  +P + + +GP I+DGFYYD D E    S+D+LA 
Sbjct: 61  TPDHEDALGILRHSAAHLFAQAAKRHFPNIHLGVGPAIQDGFYYDTDNEAGQISNDDLAT 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWF 180
           IE +M++I+  +    ++ +S E+A+E+     + YK+E++E     E  +T+Y QGE+ 
Sbjct: 121 IEAEMKKIVKENFKSERKEVSKEEAKEI--FANDPYKLELIEEHNEDEGGLTIYTQGEYT 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV STG +K FF L+ VAGAYWRG+S+  M+ RIYGTAW +++EL   L   EE
Sbjct: 179 DLCRGPHVSSTGVIK-FFHLLNVAGAYWRGNSDNKMMQRIYGTAWFSKEELEANLKLREE 237

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           +++RDHRKL RE+DLF    +   G  +W   G  I + +  ++  +++K+ Y+ + TP 
Sbjct: 238 AKERDHRKLGRELDLFFNDAELGAGTAYWLPAGATIRRIIERFVVDQEVKNGYQHVITPV 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +++ + ++QSGHW  Y  +M+          D     L+PMNCP H+A++ H + SYREL
Sbjct: 298 MMNLNTYKQSGHWQHYHEDMYPPMDMG----DGEEMELRPMNCPSHIAIYKHHVHSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG ++R E SG+L GL RVR  T +D H F   EQ+  E  KI  LI+ +Y+DF
Sbjct: 354 PIRIAEFGMMHRYEKSGALSGLQRVREMTLNDGHTFVMLEQVQEEFSKILQLIMDMYRDF 413

Query: 419 GFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           G      +LS R  K        D +W+ ++ ++K  +D +K      ++     GE AF
Sbjct: 414 GINDYSFRLSYRDPKDTVKYFPDDEMWEKSQAMLKATMDDMK------LDYVEAEGEAAF 467

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K A+G +    TIQ+DF  P  F+  YV +  EK  PVMIHR V  ++ERF
Sbjct: 468 YGPKLDIQVKTALGNEETLSTIQLDFLNPENFDISYVGADGEKHRPVMIHRGVISTLERF 527

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINY 593
           I  +IE +KG  P WL+P QA +  + +    +YA +I   L+     +  D  NE + +
Sbjct: 528 IAYLIEVYKGAFPTWLAPTQATIIPVNNEIHADYAWKIQRELQDKGFRVVVDEANEKMGW 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR+    KIP  I+ GD+E +  ++ IRR+GS  T+ +   D I  ++ +
Sbjct: 588 KIRQSQTHKIPYQIVIGDQEQANGTVNIRRYGSKETEVIPFEDFIEKISAD 638


>gi|228469293|ref|ZP_04054319.1| threonyl-tRNA synthetase [Porphyromonas uenonis 60-3]
 gi|228309192|gb|EEK17794.1| threonyl-tRNA synthetase [Porphyromonas uenonis 60-3]
          Length = 650

 Score =  635 bits (1638), Expect = e-180,   Method: Composition-based stats.
 Identities = 261/652 (40%), Positives = 391/652 (59%), Gaps = 19/652 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M   I +T PDGS+K     +T  D+A SIS  LA++ +A   +GK+ D+  P+ ++  I
Sbjct: 1   MSDQIHITLPDGSVKEMKQGSTPLDIANSISERLAQEVLAAECDGKLIDVRTPLMQDAHI 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDE 118
           +++  ED        H+ AH+MAEA+Q ++P VQ  IGP IE GFYYD D  +Q   S++
Sbjct: 61  KLLKWEDEGGKHAFWHTSAHLMAEALQELYPGVQFGIGPAIEAGFYYDIDTGDQVIKSED 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L +IE KM E+  R     ++ +S   A + F+   + YK+E++  +     +T Y QG 
Sbjct: 121 LPKIEAKMLELARRKETLERKAISKSDALDFFKKTGQTYKLELINDL-EDGTITTYTQGA 179

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + DLCRGPH+ ST  +K   KL+ VAGAYWRGD  R  L+RIYG  +  ++ L +YL  L
Sbjct: 180 FTDLCRGPHLPSTAPIK-AVKLLSVAGAYWRGDETRRQLTRIYGITFPKKKLLDEYLALL 238

Query: 239 EESEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINT 296
           EE++KRDHRK+ +E++LF      G G+  W  +G ++   L  +++R + +  Y+++ T
Sbjct: 239 EEAKKRDHRKIGKELELFAFSQRVGQGLPLWLPRGTQLRLKLEDFLKRIQKRYGYQQVMT 298

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P + +  L++ SGH+  Y A+ F V     T ++   F LKPMNCP H  ++     SYR
Sbjct: 299 PHIGNVELYKTSGHYAKYGADSFQVIT---TPQEGEAFMLKPMNCPHHCEIYKLKPHSYR 355

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +LPVRLAEFG+VYR E SG LHGL RVRGFTQDDAH+FC  +Q+  E LK+  +I  I++
Sbjct: 356 DLPVRLAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCRPDQVKEEFLKVMEIIFIIFR 415

Query: 417 DFGFEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
              FE    ++S R +    K +GS+  WD AE  +      I+   +  +   V   E 
Sbjct: 416 ALDFENFEAQISLRSQTDRSKYIGSEENWDRAEQAI------IEACQEAGLPAHVEYDEA 469

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           AFYGPK ++++KDA+GR WQ GTIQVD+NLP RF   Y    ++K  PVMIHRA FGS+E
Sbjct: 470 AFYGPKLDFMVKDALGRRWQLGTIQVDYNLPERFELEYTGEDNQKHRPVMIHRAPFGSME 529

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
           RF+ ++IE+  G  PLWLSP Q ++  ++    +YA E+A  L    +S+  D RNE + 
Sbjct: 530 RFVAVLIEHTAGKFPLWLSPDQVVILPVSERFNDYAYEVAAALSEQDISVSVDDRNEKVG 589

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            KIR++ +K+IP ++I G++E ++ ++ +R+ G        +      + KE
Sbjct: 590 RKIRDNELKRIPYMLIVGEQEQADGTVSVRKQGEGDAGTEKISTFAERILKE 641


>gi|53712976|ref|YP_098968.1| threonyl-tRNA synthetase [Bacteroides fragilis YCH46]
 gi|60681188|ref|YP_211332.1| threonyl-tRNA synthetase [Bacteroides fragilis NCTC 9343]
 gi|253563046|ref|ZP_04840503.1| threonyl-tRNA synthetase [Bacteroides sp. 3_2_5]
 gi|265763073|ref|ZP_06091641.1| threonyl-tRNA synthetase [Bacteroides sp. 2_1_16]
 gi|73919767|sp|Q5LEQ6|SYT_BACFN RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|73919768|sp|Q64VP2|SYT_BACFR RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|52215841|dbj|BAD48434.1| threonyl-tRNA synthetase [Bacteroides fragilis YCH46]
 gi|60492622|emb|CAH07394.1| putative threonyl-tRNA synthetase [Bacteroides fragilis NCTC 9343]
 gi|251946822|gb|EES87104.1| threonyl-tRNA synthetase [Bacteroides sp. 3_2_5]
 gi|263255681|gb|EEZ27027.1| threonyl-tRNA synthetase [Bacteroides sp. 2_1_16]
 gi|301162677|emb|CBW22224.1| putative threonyl-tRNA synthetase [Bacteroides fragilis 638R]
          Length = 646

 Score =  635 bits (1637), Expect = e-180,   Method: Composition-based stats.
 Identities = 256/649 (39%), Positives = 393/649 (60%), Gaps = 19/649 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+TFPDGS++ +     G  +AESIS  LA+  +A  +NG++ DL  P+  + S+ + 
Sbjct: 1   MIKITFPDGSVREYNEGVNGLQIAESISSRLAQDVLACGVNGEIYDLGRPINEDASVVLY 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
             ED +      H+ AH++AEA+Q ++P +Q  IGP IE+GFYYD D  E      +L  
Sbjct: 61  KWEDEQGKHAFWHTSAHLLAEALQELYPGIQFGIGPAIENGFYYDVDPGEAVIKEADLPA 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE KM E++A+    +++ ++   A ++F  + E YK E++  +    ++T Y QG++ D
Sbjct: 121 IEAKMAELVAKKEAVVRRDIAKGDALKMFGDRGETYKCELISEL-EDGHITTYTQGDFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ +T  +K   KL  VAGAYWRG  +R ML+RIYG  +  ++ L +YL  +EE+
Sbjct: 180 LCRGPHLMTTAPIK-AIKLTSVAGAYWRGHEDRKMLTRIYGITFPKKKMLDEYLALMEEA 238

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           +KRDHRK+ +EM LF  ++    G+  W  KG  +   L  ++RR + + DY+E+ TP +
Sbjct: 239 KKRDHRKIGKEMQLFMFSDTVGKGLPMWLPKGTALRLRLQDFLRRIQTRYDYQEVITPPI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            ++ L+  SGH+  Y  + F       T ++   + LKPMNCP H  ++ +  +SY++LP
Sbjct: 299 GNKLLYVTSGHYAKYGKDAFQ---PIHTPEEGEEYFLKPMNCPHHCEIYKNFPRSYKDLP 355

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AEFG+V R E SG LHGL RVR FTQDDAH+FC  +Q+  E L++ ++I  +++   
Sbjct: 356 LRIAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKGEFLRVMDIISIVFRSMD 415

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           F+    ++S R     EK +GSD  W+ AE  +    +      +  +   +  GE AFY
Sbjct: 416 FDNFEAQISLRDKVNREKYIGSDENWEKAEQAIIEACE------EKGLKAKIEYGEAAFY 469

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDAIGR WQ GTIQVD+NLP RF   Y+ S ++K  PVMIHRA FGS+ERF+
Sbjct: 470 GPKLDFMVKDAIGRRWQLGTIQVDYNLPERFELEYMGSDNQKHRPVMIHRAPFGSMERFV 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE+  G  PLWL+P Q ++  I+    EYA+++   LK   +    D RNE I  KI
Sbjct: 530 AVLIEHTAGKFPLWLTPEQVVILPISEKFNEYAEKVKTYLKMKEIRAIVDDRNEKIGRKI 589

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R++ +K+IP ++I G+KEA    + +RR G      +   +   IL +E
Sbjct: 590 RDNEMKRIPYMLIVGEKEAENGEVSVRRQGEGDKGTMKFEEFGEILNEE 638


>gi|320109353|ref|YP_004184943.1| threonyl-tRNA synthetase [Terriglobus saanensis SP1PR4]
 gi|319927874|gb|ADV84949.1| threonyl-tRNA synthetase [Terriglobus saanensis SP1PR4]
          Length = 676

 Score =  635 bits (1637), Expect = e-180,   Method: Composition-based stats.
 Identities = 276/676 (40%), Positives = 391/676 (57%), Gaps = 48/676 (7%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAI----------------- 43
           M   IK+  PDGSI+  P   T  D+A SIS  LA   V   I                 
Sbjct: 1   MSEQIKIHLPDGSIREVPSGTTPLDIATSISPRLAAVVVVARIKALHAAPPASTTDETTS 60

Query: 44  -------NG----KVCDLSDPVREG-SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE 91
                  +     K+ DL  P+ E  S+E++   DP +L V+RHS AH+MA A+  ++PE
Sbjct: 61  EDAMYAADNTAAEKIVDLRQPLTEDVSLELLKESDPDALKVLRHSAAHVMATAITELYPE 120

Query: 92  VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFE 151
           V++  GP  ++GF+YD  +E+PF+ D+LA IE++M +++ RD PFL+ Y   E+A   + 
Sbjct: 121 VKLGHGPATDNGFFYDIYREKPFTPDDLAAIEQRMADVVKRDEPFLRSYEPREQALADYA 180

Query: 152 SKKEAYKVEILESIPA-KENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRG 210
           +  E  K   +E      E V+LY+ G + D CRGPHV STG+VK  +K+  +AGAYW G
Sbjct: 181 AHGEFMKQHFIEKFTHPGEEVSLYKNGAFTDFCRGPHVPSTGRVK-AYKVTTIAGAYWLG 239

Query: 211 DSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAE-DGSGVIFWH 269
           D   P L R+YGTA+  Q++L  +   LEE + RDHR L +++DLF I E  GSG+IFWH
Sbjct: 240 DEKNPQLQRVYGTAFYNQKDLDAHFKHLEEIKARDHRVLGKQLDLFSIQELAGSGLIFWH 299

Query: 270 RKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTI 328
             G  I +T+  +MR + ++  Y+ + TP V+ + LWQ SGH   Y  NM+A    DD  
Sbjct: 300 PNGAIIRKTMEDWMRDECLRRGYDLVVTPHVMRRELWQISGHEGFYGQNMYAPMELDDA- 358

Query: 329 KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQ 388
                + LKPMNCPGH+ ++ +  KSYR+LPVR AE G+VYR E SG++HGL+RVRGFTQ
Sbjct: 359 ----EYRLKPMNCPGHILIYKNSPKSYRDLPVRYAELGNVYRYERSGTMHGLLRVRGFTQ 414

Query: 389 DDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE----KRVGSDALWDDA 444
           DDAH+FCT  Q+ +E +        +   FGF +  V+LST         VG    W+ A
Sbjct: 415 DDAHIFCTPAQIEDEVVACVEFAEEVLHKFGFNEFKVELSTWDPNDAKHYVGDPKDWELA 474

Query: 445 ENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPS 504
            N +K  L+      +  I    + GE AFYGPK +  L D +GR WQ  T+Q DFNLP 
Sbjct: 475 VNGLKTALN------RKNIPYKEIPGEAAFYGPKIDVKLVDVLGRLWQLSTVQFDFNLPR 528

Query: 505 RFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA 564
           RF   Y     EK  PVM+HRA+FGS+ERF G++IE++ G  PLWL+PIQ  +  I+   
Sbjct: 529 RFELEYTGEDGEKHQPVMVHRALFGSVERFFGVLIEHYAGAFPLWLAPIQIGLVPISEKH 588

Query: 565 VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRF 624
             YA+ +   L++  L +  D RNE +N KIR+ +++K+P ++I GDKEA  +++ +R  
Sbjct: 589 TAYAETVKKELEAIGLRVTLDARNEKMNAKIRDLTLQKVPFVLIMGDKEAEAKAVSVRTR 648

Query: 625 GSTTTQKVSLLDAIPI 640
           G        L D +  
Sbjct: 649 GKGDEGSTPLADFLAR 664


>gi|294673346|ref|YP_003573962.1| threonine--tRNA ligase [Prevotella ruminicola 23]
 gi|294474289|gb|ADE83678.1| threonine--tRNA ligase [Prevotella ruminicola 23]
          Length = 648

 Score =  635 bits (1637), Expect = e-180,   Method: Composition-based stats.
 Identities = 248/647 (38%), Positives = 384/647 (59%), Gaps = 18/647 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +TFPDGS++++    TG  +AESIS +LA+  V+  +NG+  +L+ P+  + +IE+ 
Sbjct: 2   MINITFPDGSVRSYEQGVTGFQIAESISPALARSVVSCGVNGETVELNRPINEDATIELY 61

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF--DKEQPFSSDELA 120
             +D +      H+ AH++AEA+Q ++P +Q   GP +E+GF+YD      +     +  
Sbjct: 62  KFDDEQGKHTFWHTSAHLLAEALQELYPGIQFGFGPAVENGFFYDVLLKDGESIKESDFP 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IE KM+E+  +  P +++ +   +A + F    + YK E +E      ++T Y QG + 
Sbjct: 122 KIEAKMKELAGKKEPVVRREVPKAEALKQFAEWGQTYKCEHIEQDLEDGSITTYTQGNFT 181

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+  TG++K   KL  VAGA+WRGD+NR  + R+YG ++  ++ L +YL  LEE
Sbjct: 182 DLCRGPHLVDTGEIK-AVKLTSVAGAFWRGDANREQMQRLYGISFPKKKMLDEYLEMLEE 240

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++KRDHRK+ +EM+LF  +E    G+  W  KG ++   L  ++R+  K   Y+E+ TP 
Sbjct: 241 AKKRDHRKIGKEMELFMFSEKVGKGLPIWLPKGTELRLRLQDHLRKVQKRFGYQEVITPH 300

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +  ++L+  SGH+  Y  + F       T ++   + LKPMNCP H  +F    +SYR+L
Sbjct: 301 IGSKNLYVTSGHYAHYGKDSFQ---PIHTPEEDEEYMLKPMNCPHHCEIFAWKPRSYRDL 357

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG+VYR E SG LHGL RVR FTQDDAH+FC  +Q+  E L + ++I  +   F
Sbjct: 358 PLRIAEFGTVYRYEQSGELHGLTRVRSFTQDDAHLFCRPDQVKQEFLNVMDIIGIVLTAF 417

Query: 419 GFEKIMV---KLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           GF        +     +K VG+D  W  AE  +           +  +   V  GE AFY
Sbjct: 418 GFNFEAQISLRDPNDHDKYVGTDEDWALAEKAIVEACQ------EKGLPAKVEYGEAAFY 471

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDAIGR WQ GTIQVD+NLP RFN  Y +  ++K  PVMIHRA FGS+ERF 
Sbjct: 472 GPKLDFMIKDAIGRRWQLGTIQVDYNLPKRFNLEYTDEDNQKKTPVMIHRAPFGSMERFC 531

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE+  G+ PLWL+P Q  +  ++    +YAQE+A       +    D RNE +  KI
Sbjct: 532 AVLIEHTSGHFPLWLTPDQVAILPLSEKYNDYAQEVAKKFDMGGVRATVDMRNEKLGRKI 591

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           R++ +K+IP ++I G+KEA+E ++ +R  G       ++ + I  + 
Sbjct: 592 RDNELKRIPYMVIVGEKEAAEGTVAVRPQGGGEQSVKTIQEFIDEVN 638


>gi|218130015|ref|ZP_03458819.1| hypothetical protein BACEGG_01598 [Bacteroides eggerthii DSM 20697]
 gi|217987818|gb|EEC54144.1| hypothetical protein BACEGG_01598 [Bacteroides eggerthii DSM 20697]
          Length = 646

 Score =  635 bits (1637), Expect = e-180,   Method: Composition-based stats.
 Identities = 259/649 (39%), Positives = 393/649 (60%), Gaps = 19/649 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+TFPDGS++ +    TG  +AESIS  LA+  +A  +NG+  DL  P+  +  + + 
Sbjct: 1   MIKITFPDGSVREYNEGVTGLQIAESISSRLAQDVLACGVNGETYDLGRPISEDAEVVLY 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
             ED +      H+ AH++AEA+Q ++P +Q  IGP IE+GFYYD D  E      +L  
Sbjct: 61  KWEDEQGKHAFWHTSAHLLAEALQELYPGIQFGIGPAIENGFYYDVDPGEATIKEADLPA 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEKKM E++A+    +++ +S   A ++F  + E YK E++  +    ++T Y QG + D
Sbjct: 121 IEKKMAELVAKKEAVVRESISKTDALKMFGDRGETYKCELISEL-EDGHITTYTQGAFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ +T  +K   KL  VAGAYWRG  +R M++RIYG  +  ++ L +YL  LEE+
Sbjct: 180 LCRGPHLMTTAPIK-AIKLTSVAGAYWRGQEDRKMMTRIYGITFPKKKMLDEYLVLLEEA 238

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           +KRDHRK+ +EMDLF  ++    G+  W  KG  +   L  ++RR + + DY+E+  P +
Sbjct: 239 KKRDHRKIGKEMDLFMFSDTVGKGLPMWLPKGAALRIRLQEFLRRIQARYDYQEVMCPPI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            ++ L+  SGH+  Y  + F       T ++   + LKPMNCP H  ++ +  +SY++LP
Sbjct: 299 GNKLLYITSGHYAKYGKDSFQ---PIHTPEEGEEYFLKPMNCPHHCMIYKNSPRSYKDLP 355

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +RLAEFG+V R E SG LHGL RVR FTQDDAH+FC  +Q+ +E L++ ++I  +++   
Sbjct: 356 LRLAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKDEFLRVMDIISIVFQSMH 415

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           FE    ++S R     EK +GSD  W+ AE  +    +      +  +   V  GE AFY
Sbjct: 416 FENFEAQISLRDKVNREKYIGSDENWEKAEQAIIEACE------EKGLKAKVEYGEAAFY 469

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDAIGR WQ GTIQVD+NLP RF   Y  + ++K  PVMIHRA FGS+ERF+
Sbjct: 470 GPKLDFMVKDAIGRRWQLGTIQVDYNLPERFQLEYTGADNQKHRPVMIHRAPFGSMERFV 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE+  G  PLWL+P Q  +  I+    +YAQE+ + LK + +    D RNE I  KI
Sbjct: 530 AVLIEHTAGKFPLWLTPDQVAILPISEKFNDYAQEVKDYLKRYDVRAIVDERNEKIGRKI 589

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R++ +K+IP ++I G+KEA  R + +R+ G      +   +    + +E
Sbjct: 590 RDNEMKRIPYMLIVGEKEAENREVSVRKQGEGDQGTMKFEEFAKKVNEE 638


>gi|103486185|ref|YP_615746.1| threonyl-tRNA synthetase [Sphingopyxis alaskensis RB2256]
 gi|123380057|sp|Q1GVA9|SYT_SPHAL RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|98976262|gb|ABF52413.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Sphingopyxis
           alaskensis RB2256]
          Length = 667

 Score =  635 bits (1637), Expect = e-180,   Method: Composition-based stats.
 Identities = 298/667 (44%), Positives = 420/667 (62%), Gaps = 18/667 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
           M   I++T PDGS +      T +++A +I   LAK A+A  I+G++ D+  P+ E + +
Sbjct: 1   MSDMIRVTLPDGSAREVARGTTPAEIAAAIGPGLAKAALAAKIDGELRDIMRPLEEDTNL 60

Query: 60  EIITPEDP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD---KEQPFS 115
            ++T  D   +L + RH  AH++AEAVQ+++P  Q+  GP   DGFYYDF    +  PF 
Sbjct: 61  ALVTSRDEADALELARHDYAHVLAEAVQTLFPGTQITFGPATSDGFYYDFAPTAEHGPFR 120

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            +EL  IE++M+ IIA D P  ++    +     ++   E +K E    +PA E +++Y 
Sbjct: 121 DEELPLIEEEMRRIIAADKPLRREVWDRDALIARWKKDGETFKAEWAAELPAGEEISVYW 180

Query: 176 QGE-WFDLCRGPHVRSTGQVKKF-FKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQ 233
            G+ W D+CRGPH+ STG++    FKL +V+GAYWRGD     LSRIYGT W  +++L +
Sbjct: 181 SGDDWMDMCRGPHLASTGKLDPAAFKLTRVSGAYWRGDQKNAQLSRIYGTGWLNRKQLAE 240

Query: 234 YLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYE 292
           +L  LEE+ KRDHR+L +EMDLFH+ ++  G +FWH  G+ +++ L +YMRR I    Y 
Sbjct: 241 HLVRLEEAAKRDHRRLGQEMDLFHLQQEAHGSVFWHPNGFVVWRELEAYMRRAIDAAGYR 300

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL--------RTFALKPMNCPGH 344
           E+ TPQV+D   W+QSGHW  YR NMF +       +D            ALKPMNCP H
Sbjct: 301 EVKTPQVMDARQWEQSGHWGKYRENMFVIPDEVPNTEDEGPIVSDDAEWMALKPMNCPAH 360

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           V +F  G+KSYR+LP+RL E G  +RNEP G+LHGLMRVR FTQDDAH+FC ++Q+  E 
Sbjct: 361 VLIFRQGMKSYRDLPLRLYENGCCHRNEPHGALHGLMRVRQFTQDDAHIFCREDQIVEEV 420

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
                L   IYKDFGF   + KL+ RPEKR GSDA+WD +E+ ++  +     +++    
Sbjct: 421 RNFCALADRIYKDFGFTYAI-KLALRPEKRFGSDAMWDKSEDELRNAVIEAGLATEQY-G 478

Query: 465 TGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIH 524
              L GEGAFY PK E+ L DAIGR WQ GTIQ D  LP R +A Y+    E+  PVM+H
Sbjct: 479 WEELPGEGAFYAPKLEWHLTDAIGRTWQVGTIQSDRVLPDRLDASYIGEDGERHRPVMLH 538

Query: 525 RAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIET 584
           RA+FGS ERFIGI+IE+F G  P WL+P+QA+V TI S A +YA+     L +  +  E+
Sbjct: 539 RAIFGSYERFIGILIEHFVGRFPTWLAPVQAVVATIVSDADDYAKAATARLVAAGIRTES 598

Query: 585 DFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           D RNE INYK+REHS+ K+P +++ G +EA E ++ IR  G    + + L +AI +L  +
Sbjct: 599 DLRNEKINYKVREHSLAKVPHLLVVGKREAEEGTVAIRTLGQDGQRIMPLAEAIAMLKTQ 658

Query: 645 SLPPDCQ 651
           + PPD +
Sbjct: 659 ATPPDLK 665


>gi|283779278|ref|YP_003370033.1| threonyl-tRNA synthetase [Pirellula staleyi DSM 6068]
 gi|283437731|gb|ADB16173.1| threonyl-tRNA synthetase [Pirellula staleyi DSM 6068]
          Length = 666

 Score =  635 bits (1637), Expect = e-180,   Method: Composition-based stats.
 Identities = 264/652 (40%), Positives = 393/652 (60%), Gaps = 22/652 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG---SIE 60
            +K+  PDGS K FP   T  +VA SI   LAK  +A  ++GKV  +   + E     + 
Sbjct: 1   MLKVVLPDGSSKEFPGSVTPLEVAGSIGARLAKATLAADVDGKVVGVDTKLPESGEVKVR 60

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           ++T +DP +L V+RHS AH+MA AV  +   VQ+A GP +E GFYYDF   +P S ++  
Sbjct: 61  LLTRKDPEALGVMRHSAAHVMARAVMRLHQGVQLAFGPTVEGGFYYDFQLPKPLSEEDFP 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES-IPAKENVTLYRQGEW 179
            IE +M++I+A+D PF +  +   +A  + E   + YKVE + + +    +++ YRQGE+
Sbjct: 121 AIEAEMKKIVAKDEPFERMDVDRSEALAMCEGLAQHYKVEHISTGLAEHPSLSFYRQGEF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV S G +  F KL+ +AGAYW+GDSN   L R+Y TA+ TQ+EL ++L  +E
Sbjct: 181 LDLCRGPHVPSAGAIGAF-KLLSLAGAYWKGDSNNAQLQRLYATAFFTQEELDEHLRKIE 239

Query: 240 ESEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
           E+++RDHR L +++DLF I    GSG+I W  KG  I   L S++R ++ +  Y+ + TP
Sbjct: 240 EAKRRDHRLLGKQLDLFTINPLVGSGLILWLPKGATIRGLLESFVREELIRRGYQTVYTP 299

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    L++ SGH+  Y  +MF         K+   + LKPMNCP H+ ++    +SYRE
Sbjct: 300 HIGKVDLYRTSGHFPYYADSMFPPFV----TKEEEEYLLKPMNCPHHIMIYKSKPRSYRE 355

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+RLAEFG+V+R E SG L G+ RVRGFTQDDAH+FCT EQ+  E      +   + K 
Sbjct: 356 LPLRLAEFGTVHRYEKSGQLSGMTRVRGFTQDDAHIFCTDEQVPGEFEGCIEMTQFVLKS 415

Query: 418 FGFEKIMVKLSTRPEK---RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            G +   V+L  R  K    VGS+ LW+ A+  +  V   +       I      GE AF
Sbjct: 416 LGLDNYRVRLGFRDPKSDKYVGSEELWNRAQGALVEVCTRLG------IEYTAEEGEAAF 469

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLP--SRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           YGPK ++++ D IGR+WQ GT+Q+D+NLP   RF+  YV + ++   PVMIHRA  GS+E
Sbjct: 470 YGPKADFVVTDCIGREWQLGTVQLDYNLPSAERFDLEYVGADNKIHRPVMIHRAPLGSME 529

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
           RFIG++IE+F G  PLWL+P QA V T++  +  Y +E+   L+S    +  D+R+E + 
Sbjct: 530 RFIGVLIEHFAGAFPLWLAPEQARVVTVSEKSEAYGREVEEKLRSAGFRVSGDYRSEKLG 589

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            KIR+  ++ IP + + G ++A + ++ +R         +SL DA+  L+ E
Sbjct: 590 AKIRDAQLELIPYMFVVGPRDAEQGTVSLRDRLDGDLGALSLADAMQRLSDE 641


>gi|325298803|ref|YP_004258720.1| threonyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
 gi|324318356|gb|ADY36247.1| threonyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
          Length = 647

 Score =  635 bits (1637), Expect = e-180,   Method: Composition-based stats.
 Identities = 259/650 (39%), Positives = 392/650 (60%), Gaps = 20/650 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+TFPDGS++ +    TG  +AESIS  LA+  +A  +NG+  DL+ P+  + S+ + 
Sbjct: 1   MIKITFPDGSVREYNEGVTGLQIAESISSRLAQDVLACGVNGETIDLTRPINEDASVVLY 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ--PFSSDELA 120
             +D +      H+ AH++AEA+Q ++P +Q  IGP IE+GFYYD D          +L 
Sbjct: 61  KWDDEQGKHAFWHTSAHLLAEALQELYPGIQFGIGPAIENGFYYDVDPGDGVVIKESDLP 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IE+KM E+ AR  P ++  ++ + A ++F  + E YK E++  +    ++T Y QG + 
Sbjct: 121 AIEQKMIELAARKEPLVRANIAKDDALKMFGERGETYKCELISEL-EDGHITTYTQGAFT 179

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ ST  +K   KL+ VAGAYWRG  +R  ++RIYG  +  ++ L +YL  LEE
Sbjct: 180 DLCRGPHLPSTAPIK-AIKLLSVAGAYWRGQEDRKQMTRIYGITFPKKKMLDEYLVMLEE 238

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           ++KRDHRK+ +EMDLF  ++    G+  W  KG  +   L  ++RR + + DY+E+  P 
Sbjct: 239 AKKRDHRKIGKEMDLFMFSDMVGKGLPMWLPKGTALRIRLQDFLRRIQARYDYQEVMCPP 298

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           + ++ L+  SGH+  Y  + F       T ++   + LKPMNCP H  ++ +  +SYR+L
Sbjct: 299 IGNKLLYVTSGHYAKYGKDSFQ---PIHTPEEGEEYFLKPMNCPHHCMIYRNSPRSYRDL 355

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG+V R E SG LHGL RVR FTQDDAH+FC  +Q+ +E L++ ++I  ++K  
Sbjct: 356 PLRIAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKDEFLRVMDIISIVFKSM 415

Query: 419 GFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            FE    ++S R     EK +GSD  W+ AE  +           +  +   V  GE AF
Sbjct: 416 NFENFEAQISLRDKVNREKYIGSDENWEKAEQAIVEACQ------EKGLKAKVEYGEAAF 469

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK ++++KDAIGR WQ GTIQVD+NLP RF   Y+ + ++K  PVMIHRA FGS+ERF
Sbjct: 470 YGPKLDFMVKDAIGRRWQLGTIQVDYNLPERFQLEYMGADNQKHRPVMIHRAPFGSMERF 529

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
           + ++IE+  G  PLWL+P Q  V  I+    EYA ++   LK + +    D RNE I  K
Sbjct: 530 VAVLIEHTAGKFPLWLTPDQVAVLPISEKFNEYADQVRLELKKYDIRALVDDRNEKIGRK 589

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IR++ +K IP ++I G+KEA+   + +R+ G      V + +    + +E
Sbjct: 590 IRDNEMKHIPYMLIVGEKEAANGEVSVRKQGEGDKGTVKIEEFAKNIAEE 639


>gi|282882529|ref|ZP_06291150.1| threonine--tRNA ligase [Peptoniphilus lacrimalis 315-B]
 gi|281297671|gb|EFA90146.1| threonine--tRNA ligase [Peptoniphilus lacrimalis 315-B]
          Length = 636

 Score =  634 bits (1636), Expect = e-180,   Method: Composition-based stats.
 Identities = 265/640 (41%), Positives = 398/640 (62%), Gaps = 16/640 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDG  K F    +  +V +SIS  L + +V   +N KV   +D +  + + +++  +
Sbjct: 3   ITLPDGEKKEFEKGISVGEVTKSISEGLYRDSVGAKVNDKVLGNADKINEDSTFKVLKLD 62

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D     ++ HS +H+MA A+++++P  + AIGP I+ GFYYD D +  F  ++   IEKK
Sbjct: 63  DLEGQKILWHSASHLMAYAIETLYPNTKFAIGPAIDSGFYYDMDLDHRFVEEDFQAIEKK 122

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M E+   D   ++  ++ + A + F+ K + YKVE++E +   E +TLY+ GE+ DLCRG
Sbjct: 123 MIELAREDLKIVRVDITRDAAIKYFKEKGQDYKVELIEDLAEDEPITLYQMGEFTDLCRG 182

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PH+ ST ++K   KL+ +AGAYWRGDSN  ML RIYG A++ +++L +++   EE+EKRD
Sbjct: 183 PHLESTKKIK-AVKLLSIAGAYWRGDSNNKMLQRIYGIAFDKKKKLDEFIEKREEAEKRD 241

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHL 304
           HRKL RE+DLF + E+G G  F+H  G      L+S+ +  +++  Y EI TP +L++ L
Sbjct: 242 HRKLGRELDLFSMHEEGPGFPFFHPNGMITRNNLLSWWKNVLQERGYGEILTPVILNEDL 301

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W +SGHWD Y+ NM+       T  D   +A+KPMNCPG   +++    SYR+LP+R AE
Sbjct: 302 WHRSGHWDHYKENMYF------TEIDEEGYAVKPMNCPGSTLIYSTTPHSYRDLPLRYAE 355

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FG V+R+E SG+LHGL RVR FTQDDAH++C   Q+ +E  +I +L   +Y  FGF+   
Sbjct: 356 FGLVHRHELSGALHGLFRVRSFTQDDAHIYCLPNQIKSEVFEIIDLANLLYDTFGFKYS- 414

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           V+LSTRP+  +G    W++AE  +K  L+      +  +   +  G+GAFYGPK +Y L+
Sbjct: 415 VELSTRPDDYMGDLGSWNEAEKALKEALE------EKGMPYTINEGDGAFYGPKIDYHLE 468

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           DAIGR WQCGTIQ+DF LP  F   YV     K  PVM+HRA+FGS+ERF+GI+IE+F G
Sbjct: 469 DAIGRTWQCGTIQLDFQLPQNFELTYVAEDGSKKRPVMLHRALFGSVERFMGILIEHFAG 528

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             PLWLSP+Q  +  ++     YA E+ + LK   + ++ D R E + YKIRE  +KK+ 
Sbjct: 529 KFPLWLSPVQVEIIPVSEKFKPYAGEVFDQLKKAGIRVKIDERAEKVGYKIREAQLKKVN 588

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            +++ G+KE     + +R+      + V +   I  L KE
Sbjct: 589 YMLVIGEKETESHKLSVRKRSGEEVKDVEVSKFIEDLKKE 628


>gi|189466356|ref|ZP_03015141.1| hypothetical protein BACINT_02731 [Bacteroides intestinalis DSM
           17393]
 gi|189434620|gb|EDV03605.1| hypothetical protein BACINT_02731 [Bacteroides intestinalis DSM
           17393]
          Length = 646

 Score =  634 bits (1636), Expect = e-179,   Method: Composition-based stats.
 Identities = 261/649 (40%), Positives = 394/649 (60%), Gaps = 19/649 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+TFPDGS++ +    TG  +AESIS  LA++ +A  +NG++ DL  P+  +    + 
Sbjct: 1   MIKITFPDGSVREYNDGVTGLQIAESISSRLAQEVLACGVNGEIYDLGRPINEDAEFVLY 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
             ED +      H+ AH++AEA+Q ++P +Q  IGP IE+GFYYD D  E      +L  
Sbjct: 61  KWEDEQGKHAFWHTSAHLLAEALQELYPGIQFGIGPAIENGFYYDVDPGEATIKESDLPA 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE KM E++A+    +++ +S   A   F  + E YK E++  +    ++T Y QG + D
Sbjct: 121 IEAKMAELVAKKEAVVRESISKADALTKFGDRGETYKCELISEL-EDGHITTYTQGAFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ +T  +K   KLM VAGAYWRG  +R M++RIYG  +  ++ L +YL  LEE+
Sbjct: 180 LCRGPHLMTTAPIK-AIKLMSVAGAYWRGHEDRKMMTRIYGITFPKKKMLDEYLVVLEEA 238

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           +KRDHRK+ REMDLF  ++    G+  W  KG  +   L  ++RR + + DY+E+ TP +
Sbjct: 239 KKRDHRKIGREMDLFMFSDTVGKGLPMWLPKGTALRLRLQEFLRRIQARYDYQEVITPPI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            ++ L+  SGH+  Y  + F       T ++   + LKPMNCP H  ++ +  +SY++LP
Sbjct: 299 GNKLLYITSGHYAKYGKDSFQ---PIHTPEEGEEYFLKPMNCPHHCMIYKNSPRSYKDLP 355

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +RLAEFG+V R E SG LHGL RVR FTQDDAH+FC  +Q+ +E L++ ++I  +++   
Sbjct: 356 LRLAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKDEFLRVMDIISIVFRSME 415

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           F  +  ++S R     EK +GSD  W+ AE  +    +      +  +   +  GE AFY
Sbjct: 416 FANVEAQISLRDKVNREKYIGSDENWERAEQAIIEACE------EKGLTARIEYGEAAFY 469

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDAIGR WQ GTIQVD+NLP RF+  Y  + ++K  PVMIHRA FGS+ERF+
Sbjct: 470 GPKLDFMVKDAIGRRWQLGTIQVDYNLPERFDLEYTGADNQKHRPVMIHRAPFGSMERFV 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE+  G  PLWL+P Q  +  I+    +YAQE+   LK + +    D RNE I  KI
Sbjct: 530 AVLIEHTAGKFPLWLTPEQVAILPISEKFNDYAQEVKKFLKQYDIRAIVDERNEKIGRKI 589

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R++ +K+IP ++I G+KEA  R + +R+ G      +   +   IL +E
Sbjct: 590 RDNELKRIPYMLIVGEKEAENREVSVRKQGEGDKGTMKFEEFAKILNEE 638


>gi|56965736|ref|YP_177470.1| threonyl-tRNA synthetase [Bacillus clausii KSM-K16]
 gi|56911982|dbj|BAD66509.1| threonyl-tRNA synthetase [Bacillus clausii KSM-K16]
          Length = 637

 Score =  634 bits (1636), Expect = e-179,   Method: Composition-based stats.
 Identities = 281/647 (43%), Positives = 424/647 (65%), Gaps = 19/647 (2%)

Query: 1   MPSD-IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS- 58
           M    I + FPDG  K FP   T +++A+SIS SL KK +   ING   DL+ P+ E + 
Sbjct: 1   MSEPLIAIEFPDGKSKQFPQGVTLAELAQSISPSLYKKTIVGCINGVPSDLACPITENAH 60

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           I +        + V+RHS AH++A A++ ++P V + +GP+I DGF+YD   +QP +  +
Sbjct: 61  ISLYDVASKEGIEVLRHSTAHLLAHALKRLYPAVHLGVGPVIGDGFFYDVALDQPITVGD 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L +IE+ M++II  D    ++ ++ EKA++LF+  ++  K+E+LE IP  E VT+Y QG+
Sbjct: 121 LLRIEQMMKQIIKEDMEITRKEVTREKAKQLFK--QDPLKLELLEDIPPDETVTVYEQGD 178

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           ++DLCRGPH+ STG++K F KL KV+GAYWRG+S+  ML RIYG A+ T+ EL  Y  FL
Sbjct: 179 FYDLCRGPHIPSTGKIKHF-KLTKVSGAYWRGNSDNQMLQRIYGVAFATKDELQDYFAFL 237

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTP 297
           EE+EKR+HRKL +E++LF  +E+  G+ F+   G  I   L S++R  + K DY+E+ TP
Sbjct: 238 EEAEKRNHRKLGKELELFMFSEEAPGMPFYLANGQIIRNELESFLRNLQAKYDYKEVRTP 297

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +++Q LW+QSGHWD Y+ NM+  +       D + FALKPMNCPGH+ +F +GL SYR+
Sbjct: 298 IMMNQRLWEQSGHWDHYKENMYFTQV------DEQQFALKPMNCPGHMLIFKNGLHSYRD 351

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFG V+R+E SG+L+GL+RVR F QDDAH+F T +Q+  E      +I  +Y+ 
Sbjct: 352 LPIRMAEFGQVHRHEFSGALNGLLRVRTFCQDDAHIFVTPQQIEEEITLALKIIDHVYQV 411

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF+  + +LSTRP+  +GS+ LW+ AE  ++ VL  +  +        V  G+GAFYGP
Sbjct: 412 FGFKYEI-ELSTRPDDFMGSEHLWEQAETALENVLQKLNYA------YKVNEGDGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  +KDAI R  QC T+Q+DF LP +F+  Y++  +EK  PV+IHRAVFGSI+RF+GI
Sbjct: 465 KIDIHIKDAIQRSHQCATVQLDFQLPEKFDLTYIDKQNEKKRPVVIHRAVFGSIDRFLGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE+F G  P+WL+P+Q  +  ++   ++Y   I + LK   + +  D  +E + YKIR+
Sbjct: 525 LIEHFAGAFPVWLAPVQVQIVPVSHVHLDYCLTIQSELKQVGVRVNIDESDEKLGYKIRK 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
             ++KIP  I+ GD E  E ++ +R++G   T++V        L ++
Sbjct: 585 AQMQKIPCTIVLGDNELKEETVTVRQYGKPETERVPFEYFKEKLVRQ 631


>gi|313673284|ref|YP_004051395.1| ser-tRNA(thr) hydrolase; threonyl-tRNA synthetase [Calditerrivibrio
           nitroreducens DSM 19672]
 gi|312940040|gb|ADR19232.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Calditerrivibrio
           nitroreducens DSM 19672]
          Length = 640

 Score =  634 bits (1635), Expect = e-179,   Method: Composition-based stats.
 Identities = 273/642 (42%), Positives = 408/642 (63%), Gaps = 16/642 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           +++  PD +       AT +DVA+ IS  L K+A+A  +NG + DLS  V++G  + IIT
Sbjct: 1   MEIVLPDKNKVLLENDATVADVAKKISEGLFKRAIAGRVNGNLVDLSTKVKDGDQVTIIT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +DP ++ ++RHS AH+MA+AVQ ++ +V+V IGP I+DGFYYDFD + PF  ++L +IE
Sbjct: 61  EKDPEAIDILRHSTAHLMAQAVQRLFKDVKVTIGPTIQDGFYYDFDIDTPFKEEDLEKIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           + M +I  +D P +++ L+ E A +LF    E YKVEI+  +     V++Y QG++ DLC
Sbjct: 121 QVMADIARQDLPIIRKELTKEDAIKLFSEMGETYKVEIINDLGED-VVSVYSQGDFVDLC 179

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG +K F KL+ VAGAYWRGD    ML RIYGTAW  + EL +YL  LEE++K
Sbjct: 180 RGPHLPSTGFIKHF-KLLSVAGAYWRGDEKNKMLQRIYGTAWFKKSELDEYLNRLEEAKK 238

Query: 244 RDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLD 301
           RDHR+L +E++LF    E GSG+I W  KG K+  T+  + RR+  K+ Y+ + TP +  
Sbjct: 239 RDHRRLGKELELFGTFDEIGSGLICWMPKGAKVRATIEEFWRREHFKNGYDLLYTPHIGK 298

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
            +LWQ SGH D Y  NM++         + + + +KPMNCP H+ ++    +SYR+LP+R
Sbjct: 299 SNLWQTSGHLDFYSENMYSPMDI-----EGQNYYIKPMNCPFHIMIYKSKNRSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
            AE G+VYR E SG LHGL+RVRGFTQDDAH+ C ++Q+  E  ++    + I+K FGF 
Sbjct: 354 WAELGTVYRYERSGVLHGLLRVRGFTQDDAHIICAQDQIVEEIEEVLKFSLDIWKTFGFT 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            I   ++TRPEK VG D++W  A + +      +++  +  I   +  G GAFYGPK + 
Sbjct: 414 SIKGYIATRPEKSVGDDSMWKAATDSL------MESIKKSGIEYEIDEGGGAFYGPKIDL 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDAIGR+WQ  TIQ DFNLP RF+  YV+   ++  P M+HRA+ GS+ERF G++IE+
Sbjct: 468 KVKDAIGREWQMTTIQFDFNLPERFDMVYVDRDGKEKRPYMVHRALLGSLERFFGVLIEH 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  P WL+P+Q  +  I+    +Y +++   LK+    +E D RNE I YKIRE  + 
Sbjct: 528 YAGAFPFWLAPVQIKIMNISDEQADYCEQLYRRLKAEGFRVEMDLRNEKIGYKIREAQLF 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           K+P +I+ G++E  +  + +R     T   +   +   ++ +
Sbjct: 588 KVPHMIVIGNQEKEKNHVSVRLRNGETKNNLDFSEYFGVIDE 629


>gi|332300493|ref|YP_004442414.1| threonyl-tRNA synthetase [Porphyromonas asaccharolytica DSM 20707]
 gi|332177556|gb|AEE13246.1| threonyl-tRNA synthetase [Porphyromonas asaccharolytica DSM 20707]
          Length = 650

 Score =  634 bits (1635), Expect = e-179,   Method: Composition-based stats.
 Identities = 259/652 (39%), Positives = 392/652 (60%), Gaps = 19/652 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M   I +T PDGS+K      T  D+A SIS  LA++ +A   +GK+ D+  P+  +  I
Sbjct: 1   MSDQIHITLPDGSVKEMKQGVTPLDIANSISERLAQEVLAAECDGKLIDVRTPLMHDAHI 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDE 118
           +++  ED        H+ AH+MAEA+Q ++P VQ  IGP I+ GFYYD D  ++   S++
Sbjct: 61  KLLKWEDEGGKHAFWHTSAHLMAEALQELYPGVQFGIGPAIDAGFYYDIDTGDEVIKSED 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L +IE KM E+  R     ++ +S   A + F+   + YK+E++  +     +T Y QG 
Sbjct: 121 LPKIEAKMLELARRKETLERKAISKSDALDFFKKTGQGYKLELINDL-EDGTITTYTQGA 179

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + DLCRGPH+ ST  +K   KL+ VAGAYWRGD  R  L+RIYG  +  ++ L +YL  L
Sbjct: 180 FTDLCRGPHLPSTAPIK-AVKLLSVAGAYWRGDETRKQLTRIYGITFPKKKLLDEYLALL 238

Query: 239 EESEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINT 296
           EE++KRDHRK+ +E++LF      G G+  W  +G ++   L  +++R + +  Y+++ T
Sbjct: 239 EEAKKRDHRKIGKELELFAFSQRVGQGLPLWLPRGTQLRLKLEDFLKRIQKRYGYQQVMT 298

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P + +  L++ SGH+  Y A+ F V     T ++   F LKPMNCP H  ++     SYR
Sbjct: 299 PHIGNVELYKTSGHYAKYGADSFQVIT---TPQEGEAFMLKPMNCPHHCEIYRLKPHSYR 355

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +LPVRLAEFG+VYR E SG LHGL RVRGFTQDDAH+FC  +Q+  E LK+ ++I  I++
Sbjct: 356 DLPVRLAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCRPDQVKEEFLKVMDIIFIIFR 415

Query: 417 DFGFEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
              FE    ++S R +    K +GS+  WD AE  +      I+   +  +   V   E 
Sbjct: 416 ALDFENFEAQISLRSQTDRSKYIGSEENWDRAEQAI------IEACQEAGLPAHVEYDEA 469

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           AFYGPK ++++KDA+GR WQ GTIQVD+NLP RF+  Y    ++K  PVMIHRA FGS+E
Sbjct: 470 AFYGPKLDFMVKDALGRRWQLGTIQVDYNLPERFDLEYTGEDNQKHRPVMIHRAPFGSME 529

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
           RF+ ++IE+  G  PLWL+P Q ++  ++    EYA E+A  L  H +S+  D RNE + 
Sbjct: 530 RFVAVLIEHTAGKFPLWLAPDQVVILPVSERFNEYANEVAVALSEHDISVSIDDRNEKVG 589

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            KIR++ +K+IP ++I G++E ++ ++ +R+ G        +      + +E
Sbjct: 590 RKIRDNELKRIPYMLIVGEQEQADGTVSVRKQGEGDVGTEKISTFAERILQE 641


>gi|323344262|ref|ZP_08084488.1| threonine--tRNA ligase [Prevotella oralis ATCC 33269]
 gi|323094991|gb|EFZ37566.1| threonine--tRNA ligase [Prevotella oralis ATCC 33269]
          Length = 654

 Score =  634 bits (1635), Expect = e-179,   Method: Composition-based stats.
 Identities = 248/650 (38%), Positives = 393/650 (60%), Gaps = 19/650 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            +K+TFPDGS++ +    TG  +AESIS +LA+  V+  +NG+  +L+ P+  + +I + 
Sbjct: 1   MVKITFPDGSVREYEQGVTGLQIAESISPALARNVVSCGVNGETVELNRPINEDATIALY 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD--FDKEQPFSSDELA 120
             ED        H+ AH++AEA+Q ++P +Q   GP IE+GF+YD    K    S  +  
Sbjct: 61  KFEDEEGKHTFWHTSAHLLAEALQELYPGIQFGFGPAIENGFFYDVMPKKGDVISESDFP 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IE KM E+  +D   +++ LS   A + F++  + YK E ++       +T Y QG + 
Sbjct: 121 KIEAKMMELAKKDEQVVRKSLSKADALKEFKADGQVYKCEHIDQDLEDGTITTYTQGAFT 180

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ STG +K   K+  VAGA+WRGD+ R  L+RIYG  +  ++ L +YL  LEE
Sbjct: 181 DLCRGPHLMSTGLIK-AVKITSVAGAFWRGDAKREQLTRIYGITFPKKKMLDEYLVMLEE 239

Query: 241 SEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++KRDHRK+ +EM+LF  +   G G+  W  KG ++   L   +R+  K   Y+E+ TP 
Sbjct: 240 AKKRDHRKIGKEMELFTFSERVGKGLPIWLPKGTELRLRLQDMLRKIQKRFGYQEVITPH 299

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +  ++L+  SGH+  Y  + F       T ++   + LKPMNCP H  VF    +SY++L
Sbjct: 300 IGSKNLYVTSGHYAHYGKDSFQ---PIHTPEEDEEYMLKPMNCPHHCEVFAWKPRSYKDL 356

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG+VYR E SG LHGL RVR FTQDDAH+FC  +Q+ +E L++ ++I +++K F
Sbjct: 357 PLRIAEFGTVYRYEKSGELHGLTRVRSFTQDDAHIFCRPDQVKSEFLRVMDIIQTVFKIF 416

Query: 419 GFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            F+    ++S R  K     +G+D +W+++E  +K         ++  ++  +  GE AF
Sbjct: 417 NFDNFEAQISLRDPKDREKYIGADEVWEESEQAIKEA------CAEKGLDAKIAYGEAAF 470

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK ++++KDAIGR WQ GTIQVD+NLP RF   Y +  + K  PVMIHRA FGS+ERF
Sbjct: 471 YGPKLDFMVKDAIGRRWQLGTIQVDYNLPQRFKLEYTDEDNVKKTPVMIHRAPFGSLERF 530

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             ++IE+  G+ PLWL+P Q  +  I+    +YA++++    +  +    D RNE I  K
Sbjct: 531 TAVLIEHTAGHFPLWLTPDQVAILPISEKYNDYAKKVSKYFDAQGVRATIDDRNEKIGRK 590

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IR++ + ++P ++I G+KEA++  + +R+ G      +++ +    +  E
Sbjct: 591 IRDNELMRVPYMVIVGEKEAADGLVSMRKQGGGEQATMTMEEFAKRINGE 640


>gi|325287305|ref|YP_004263095.1| threonyl-tRNA synthetase [Cellulophaga lytica DSM 7489]
 gi|324322759|gb|ADY30224.1| threonyl-tRNA synthetase [Cellulophaga lytica DSM 7489]
          Length = 647

 Score =  634 bits (1635), Expect = e-179,   Method: Composition-based stats.
 Identities = 261/650 (40%), Positives = 392/650 (60%), Gaps = 20/650 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+T PDG++K F   +T  DVA+SIS   A+  ++   N    +   P+  +GS+ + 
Sbjct: 1   MIKITLPDGTLKEFSEGSTPMDVAKSISEGFARNVISAKFNDTTVETVTPLTEDGSLVLY 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE--QPFSSDELA 120
           T +D        HS +HI+A+A++ ++P V++ IGP IE+GFYYD D    +  S  +  
Sbjct: 61  TWKDTEGKQAFWHSSSHIVAQAIEELYPGVKLTIGPSIENGFYYDVDLGEGRSISDKDFP 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IEKK  EI      F  + ++ ++A  L++ +   YK E++E++     +T      + 
Sbjct: 121 KIEKKAIEIARGKHDFKIRSVTKDEALALYKEQGNEYKTELIENL-EDGTITFCDHDTFT 179

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRG H+ +TG VK   K++ VAGAYWRGD N+P L+RIYG ++  Q+ELT+YL  LE+
Sbjct: 180 DLCRGGHIPNTGIVK-AIKILSVAGAYWRGDENKPQLTRIYGISFPKQKELTEYLELLEQ 238

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           +++RDHRKL +E++LF  ++    G+  W  KG  + + L +++++ + K  YE + TP 
Sbjct: 239 AKQRDHRKLGKELELFTFSQKVGAGLPLWLPKGAALRERLENFLKKAQKKAGYEMVVTPH 298

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +  + L+  SGH+  Y  + F       T K    F LKPMNCP H  VFN    SY++L
Sbjct: 299 IGQKELYVTSGHYAKYGEDSFQ---PIKTPKMDEEFLLKPMNCPHHCEVFNFKPHSYKDL 355

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P R AEFG+VYR E SG LHGL RVRGFTQDDAH+FCT +Q+  E   + +L + +    
Sbjct: 356 PKRFAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCTPDQLDQEFKNVIDLSLYVLNSL 415

Query: 419 GFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           GF     ++S R    P+K +GS   W+ AEN +      I  + +  ++  +  GE AF
Sbjct: 416 GFTNFKAQVSVRDLNNPDKYIGSVENWEKAENAI------INAAKEKGLDYVIESGEAAF 469

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK ++++KDA+GR+WQ GTIQVD+NLP RF+  Y  S +E   PVMIHRA FGS+ERF
Sbjct: 470 YGPKLDFMVKDALGRNWQLGTIQVDYNLPERFDLTYKGSDNEDHRPVMIHRAPFGSMERF 529

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
           I +++E+  GN PLWL P QAIV  ++    +YA+++ N L++  +    D RNET+  K
Sbjct: 530 IALLLEHTGGNFPLWLIPDQAIVLPVSEKYEKYAKKVLNSLENDEIRALLDNRNETVGKK 589

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IRE  + KIP +II G+ E +  +I +R+ G      +S+ D   ++T E
Sbjct: 590 IREAEMNKIPFMIIIGENEEATNTISVRKHGGEDLGSISIKDFSDLVTSE 639


>gi|251795037|ref|YP_003009768.1| threonyl-tRNA synthetase [Paenibacillus sp. JDR-2]
 gi|247542663|gb|ACS99681.1| threonyl-tRNA synthetase [Paenibacillus sp. JDR-2]
          Length = 637

 Score =  634 bits (1634), Expect = e-179,   Method: Composition-based stats.
 Identities = 278/645 (43%), Positives = 421/645 (65%), Gaps = 18/645 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEII 62
           +I+  +PD SI+      T + VAES+  +  K  +A AING + DL +   +GS I++I
Sbjct: 2   EIQAVWPDESIRRVLQGTTIAQVAESMDANWKKTIIAGAINGTMADLDETFGDGSRIDMI 61

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPE--VQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
             + P  L + RHS AH++A+A++ ++    V++ IGP+IEDGFYYD D +   S+ +L 
Sbjct: 62  ALDSPEGLYISRHSTAHVLAQAIKRLYGSEAVKLGIGPVIEDGFYYDVDLDHSLSTKDLE 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IE++M+ I+  + P  ++ +S E+A  LF  + E  K+E++ ++P  E + +Y QGE+ 
Sbjct: 122 AIEQEMRSIVKENLPIKRRIVSREEALVLFGERGEPLKLELILNLPDGEVIRIYEQGEFA 181

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ STG++K F KL+ VAGAYWRGDS+  ML RIYGTA+  + EL  YLY LEE
Sbjct: 182 DLCRGPHLPSTGRIKAF-KLLHVAGAYWRGDSDNKMLQRIYGTAFLNKTELADYLYQLEE 240

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQV 299
           ++KRDHRKL +E++LF  +E+  G+ F+  KG  I   L ++ R  +   DYEE+ TP +
Sbjct: 241 AKKRDHRKLGKELELFMFSEEAPGMPFYLPKGMAIRTALENFSRELLNRNDYEEVRTPFM 300

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           +++ +W+QSGHW+ Y+ NM+  K       D   FALKPMNCPGH+ +F + L+SYRELP
Sbjct: 301 MNKRMWEQSGHWEHYKDNMYFTKV------DESEFALKPMNCPGHMLIFKNSLRSYRELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           VRLAEFG V+R+E SG+L G+MRVR F QDDAH+F   +Q+  E  K+ +LI  +YK FG
Sbjct: 355 VRLAEFGQVHRHELSGALGGMMRVRTFCQDDAHLFVRPDQIEEEIGKVMSLIGEVYKVFG 414

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F    V+LSTRP   +GSD LWD+AE  +K VLD         +N  +  G+GAFYGPK 
Sbjct: 415 F-AYTVELSTRPADYMGSDELWDEAEQSLKNVLDA------QGVNYRINEGDGAFYGPKI 467

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           ++ + DA+ R WQCGTIQ+DF +P +F+  Y+   ++K  PV+IHRA++GS++RF+GI+I
Sbjct: 468 DFHIVDALKRSWQCGTIQLDFQMPEKFDLSYIGEDNKKQRPVVIHRAIYGSLDRFLGILI 527

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E++ G  P+WL+P+QA V  ++   ++YA ++ + L    + +E D R+E +  KIR+  
Sbjct: 528 EHYSGAFPIWLAPVQAKVIPVSEHELDYALQVKSQLIQAGIRVEVDARSEKLGNKIRKSQ 587

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           ++K+P +++ G  E    S+ +R+ G        L +    + +E
Sbjct: 588 LEKVPYMLVVGKNERLSGSVSVRKRGEAEGSVQQLEEIAGAIVEE 632


>gi|153808043|ref|ZP_01960711.1| hypothetical protein BACCAC_02329 [Bacteroides caccae ATCC 43185]
 gi|149129652|gb|EDM20866.1| hypothetical protein BACCAC_02329 [Bacteroides caccae ATCC 43185]
          Length = 646

 Score =  634 bits (1634), Expect = e-179,   Method: Composition-based stats.
 Identities = 256/649 (39%), Positives = 390/649 (60%), Gaps = 19/649 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+TFPDGS++ +     G  +AESIS  LA+  +A  +NG+  DL  P+  +    + 
Sbjct: 1   MIKITFPDGSVREYNEGVNGLQIAESISSRLAQDVLACGVNGETYDLGRPINEDADFVLY 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
             +D        H+ AH++AEA+Q ++P +Q  IGP IE+GFYYD D  E      +L  
Sbjct: 61  KWDDEEGKHAFWHTSAHLLAEALQELYPGIQFGIGPAIENGFYYDVDPGEAVIKESDLPA 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE KM E+ A+    +++ ++   A ++F  + E YK E++  +    ++T Y QG + D
Sbjct: 121 IEAKMLELSAKKEAVVRKSIAKTDALKMFGDRGETYKCELISEL-EDGHITTYTQGAFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ +T  +K   KL  VAGAYWRG  +R ML+RIYG  +  ++ L +YL  LEE+
Sbjct: 180 LCRGPHLMTTAPIK-AIKLTSVAGAYWRGHEDRKMLTRIYGITFPKKKMLDEYLALLEEA 238

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           +KRDHRK+ +EM LF  +E    G+  W  KG  +   L  ++RR + + DY+E+ TP +
Sbjct: 239 KKRDHRKIGKEMQLFMFSETVGKGLPMWLPKGTALRLRLQDFLRRIQTRYDYQEVITPPI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            ++ L+  SGH+  Y  + F       T ++   + LKPMNCP H  ++ +  +SY++LP
Sbjct: 299 GNKLLYVTSGHYAKYGKDAFQ---PIHTPEEGEEYFLKPMNCPHHCEIYKNFPRSYKDLP 355

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AEFG+V R E SG LHGL RVR FTQDDAH+FC  +Q+ +E L++ ++I  +++   
Sbjct: 356 LRIAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKDEFLRVMDIISIVFRSMN 415

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           F+    ++S R     EK +GSD  W+ AE  +    +      +  +   +  GE AFY
Sbjct: 416 FQNFEAQISLRDKVNREKYIGSDDNWEKAEQAIIEACE------EKGLPAKIEYGEAAFY 469

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDAIGR WQ GTIQVD+NLP RF   Y+ S ++K  PVMIHRA FGS+ERF+
Sbjct: 470 GPKLDFMVKDAIGRRWQLGTIQVDYNLPERFELEYMGSDNQKHRPVMIHRAPFGSMERFV 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE+  G  PLWL+P Q ++  I+    +YA+++   LK+H +    D RNE I  KI
Sbjct: 530 AVLIEHTAGKFPLWLTPEQVVILPISEKFNDYAEQVKMYLKTHEIRAIVDDRNEKIGRKI 589

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R++ +K+IP ++I G+KEA    + +RR G      +   +   IL +E
Sbjct: 590 RDNEMKRIPYMLIVGEKEAENGEVSVRRQGEGDKGTMKFEEFAKILNEE 638


>gi|270009374|gb|EFA05822.1| hypothetical protein TcasGA2_TC008604 [Tribolium castaneum]
          Length = 685

 Score =  634 bits (1634), Expect = e-179,   Method: Composition-based stats.
 Identities = 244/643 (37%), Positives = 364/643 (56%), Gaps = 22/643 (3%)

Query: 5   IKLTFPDGSIKN-FPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           IK+T PDG +        T  D+A+ IS+ LA   V   +NG + DL  P+  +  +E++
Sbjct: 47  IKVTLPDGKVVEGVAWKTTAYDIAKGISQGLADNCVISKVNGVLWDLDRPLEGDCKLELL 106

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQ 121
             ++P + +V  HS AHI+ EA++ ++    +  GP IE GFYYD   E +  S+ +   
Sbjct: 107 KFDNPEAQSVFWHSTAHILGEALERVYGGC-LCYGPPIESGFYYDMFLEDKGISAGDFPY 165

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +E  M++I     PF +  +  E   E+F+     +KV IL         T+YR G   D
Sbjct: 166 LENLMKQITKEKQPFERLEMKKEDLLEMFKY--NPFKVRILNEKVDTPTTTVYRCGPLID 223

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHVR TG++K   K+ K +  YW G ++   L R+YG ++   ++L ++  F EE+
Sbjct: 224 LCRGPHVRHTGKIK-ALKVTKNSSTYWEGKADAETLQRVYGISFPDNKQLKEWEKFQEEA 282

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVL 300
            KRDHRK+ R+ +LF   E   G  F+  +G  I+ TLI++++++ +   ++E+ +P + 
Sbjct: 283 AKRDHRKIGRDQELFFFHELSPGSCFFQPRGAHIYNTLINFIKKEYRKRGFQEVISPNIF 342

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  LWQ SGHW  Y  NMF+     D       FALKPMNCPGH  +F++  +S+RELP+
Sbjct: 343 NAKLWQVSGHWAHYADNMFSFDVEKDK------FALKPMNCPGHCLIFDNRTRSWRELPL 396

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLA+FG ++RNE SG+L GL RVR F QDDAH+FC  E +  E     + +  +Y  FGF
Sbjct: 397 RLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCALEHIKQEIKGALDFLSHVYSVFGF 456

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
              +V LSTRPEK +G  A+W+ AE  +   LD             V  G+GAFYGPK +
Sbjct: 457 TFNVV-LSTRPEKYLGDLAMWEQAEKALSEGLDDFGAPW------SVNPGDGAFYGPKID 509

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
             + DA+ R  QCGTIQ+DF LP RFN  YV+   EK  PV+IHRA+ GS+ER I I+ E
Sbjct: 510 ITVHDALKRAHQCGTIQLDFQLPIRFNLSYVSESGEKKRPVIIHRAILGSVERMIAILTE 569

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FRNETINYKIREHS 599
           +  G  P W+SP QA+V  +  +  EYAQ++   L       E D    +T+N KIR   
Sbjct: 570 SCGGKWPFWISPRQAMVIPVGPTYDEYAQDVKKKLYEAGFMAEVDTDAGDTMNKKIRNAQ 629

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           + +   I++ G+KE S +++ +R   +    ++S+   I    
Sbjct: 630 LAQFNFILVVGEKERSSQTVNVRTRDNIVHGEISVEGLIEKFK 672


>gi|328953980|ref|YP_004371314.1| threonyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
 gi|328454304|gb|AEB10133.1| threonyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
          Length = 640

 Score =  633 bits (1633), Expect = e-179,   Method: Composition-based stats.
 Identities = 269/653 (41%), Positives = 413/653 (63%), Gaps = 18/653 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           S I++   DG         +     + +  +     VA  +NG++ DL+  ++ + ++  
Sbjct: 2   SVIRVQLLDGDSHQVEAGLSVGKALQLLGVARDHNVVAARVNGELVDLNSLLQIDSTVVP 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +  +DP  L ++RHS AHIMAEAV+S++P V++ IGP IE+GFYYDFD  +PF++++L +
Sbjct: 62  VAKDDPEGLQILRHSAAHIMAEAVRSLFPGVKITIGPAIENGFYYDFDPPRPFTTEDLGR 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE +M  ++ +D PF+++ +S ++A + F+++ E YKVE+L+ +   + V+LY+QG + D
Sbjct: 122 IEARMWNLVEQDLPFIRREVSWQEALDYFQAQGETYKVELLQDLK-DQQVSLYQQGGFVD 180

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ S+G +  F KL  VAGAYWRGD   PML RIYG A+ T  EL Q+L+FLEE+
Sbjct: 181 LCRGPHIPSSGYLSAF-KLTSVAGAYWRGDERNPMLQRIYGAAFATGAELDQHLHFLEEA 239

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQV 299
           ++RDHR+L RE+ LF I E+ G G++ +H KG ++   L  + RR+ ++  Y+ +  P +
Sbjct: 240 KRRDHRRLGRELGLFSIEEEAGPGLVIYHPKGARLRLVLEDFERREHLRRGYQIVMGPTL 299

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           L   LW++SGH+++YR NM+       T  +   + +KPMNC  H+ ++   ++SYRELP
Sbjct: 300 LKLDLWKRSGHFENYRENMYF------TEIEGIDYGIKPMNCLAHMLIYKSSIRSYRELP 353

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +RL E G+V+R+E SG LHGL RVR FTQDDAH+ C  +Q+  E   + + +  +   FG
Sbjct: 354 LRLFELGTVHRHERSGVLHGLTRVRQFTQDDAHILCRPDQVETEIAGVIDFVAEVMAVFG 413

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           FE   V+LSTRPEK +GSD  W+ A + +   L T        +      GEGAFYGPK 
Sbjct: 414 FEYE-VELSTRPEKSIGSDEDWERATSALINALQT------RNLPFATCEGEGAFYGPKI 466

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +  LKDAI R WQC T+Q DF LP RF+  Y+        PVM+HR + GS+ERF+G++I
Sbjct: 467 DIKLKDAINRRWQCATVQCDFTLPERFDLTYIGPDGNPHRPVMLHRVILGSLERFLGVLI 526

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E++ G  P+WL+P+QAI+  +T  A  +A ++A  L++  L +ETD RNE +  KIRE  
Sbjct: 527 EHYAGAFPVWLAPVQAIILPVTDRAHPFALDVARRLQAEELRVETDLRNEKLGLKIREAQ 586

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           ++KIP +II GD+E + +++ +RR   T  +     + + +L  E  PP   K
Sbjct: 587 LQKIPYMIIIGDREVAAQTLSVRRLDGTEIKDTPWEEFVRLLKTEGQPPRLGK 639


>gi|116747872|ref|YP_844559.1| threonyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
 gi|116696936|gb|ABK16124.1| threonyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
          Length = 644

 Score =  633 bits (1633), Expect = e-179,   Method: Composition-based stats.
 Identities = 266/649 (40%), Positives = 404/649 (62%), Gaps = 20/649 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           M ++I +T  DG+ K+FP   +  +V ++         VA  +NG   DL   +  + ++
Sbjct: 1   MSAEISVTLADGTTKSFPRGVSAGEVLKA--SGGPNGWVAAKVNGVPVDLIVGIEEDAAV 58

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           E I  +    L ++RHS AH+MA+AV+S++PE +VAIGP I++GFYYDF+ E+PF+ D+L
Sbjct: 59  EGIRADSEVGLEILRHSAAHVMAQAVKSLFPEARVAIGPAIDNGFYYDFEVERPFTQDDL 118

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IE KM+E++     F ++ L  ++A + F  + E YKVE+L+       V+ Y QG++
Sbjct: 119 DRIEAKMKELVGAKLKFERKVLPRDEAIDFFTRRGEGYKVELLQGFS-DPTVSFYTQGDF 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV  +G V+ F KL  VAGAYWRGD +  ML RIYGTA+  +  L +YL+FLE
Sbjct: 178 VDLCRGPHVPHSGYVRAF-KLTSVAGAYWRGDEHNAMLQRIYGTAFADRDALKKYLHFLE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTP 297
           E++KRDHR+L RE+DLF  +++   G++ +H +G  +   L ++  R  ++  Y  +  P
Sbjct: 237 EAQKRDHRRLGRELDLFSFSDEVGAGMVIYHPRGALLRHILEAFEKREHLRRGYHIVMGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +L   LW++SGH++ YR NM+       T  + +++ +KPMNC  H+ ++   L+SYR+
Sbjct: 297 TLLKTELWKRSGHFEHYRENMYF------TEIEEQSYGIKPMNCLAHMLIYKSRLRSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R  E G+V+R+E SG LHGL RVR FTQDDAH+ CT EQ+  E   I + +I +   
Sbjct: 351 LPLRYFELGTVHRHERSGVLHGLTRVRQFTQDDAHILCTPEQLHGEIQSIIDFVIEVMGI 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF    +++STRP K +GSD  W+ A + +   L+         I   V  GEGAFYGP
Sbjct: 411 FGFN-HEMEISTRPAKSIGSDEDWERATSALIDALED------KGIPYQVCEGEGAFYGP 463

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  L+DA+ R WQC TIQ DF LP RF+  YV     +  PVM+HR V GS+ERFIG+
Sbjct: 464 KIDVKLRDALDRKWQCATIQCDFTLPDRFDLTYVGVDGNRHRPVMVHRVVLGSLERFIGV 523

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           ++E+F G  P WL+P+QAIV T+T   +E+A+ + + L+   + +E D RNE + YKIRE
Sbjct: 524 LVEHFAGAFPTWLAPVQAIVVTVTDGQIEFARNMYDRLREAGVRVELDDRNEKLGYKIRE 583

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
             ++K+P +++ GD+E +   +  RR   T  + ++      ++ KE L
Sbjct: 584 AQMQKVPYMLVIGDREVAAGGVAPRRRDGTQLELIAPEAFAAMIQKECL 632


>gi|295115128|emb|CBL35975.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase
           [butyrate-producing bacterium SM4/1]
          Length = 605

 Score =  633 bits (1633), Expect = e-179,   Method: Composition-based stats.
 Identities = 267/611 (43%), Positives = 384/611 (62%), Gaps = 15/611 (2%)

Query: 44  NGKVCDLSDPV-REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIED 102
           +G+V DL   + ++  + I+T  D + LA +RH+ +H+MA+AV+ ++P+ ++AIGP I D
Sbjct: 2   DGEVVDLRTVIDKDCQLNILTARDEKGLAALRHTASHVMAQAVKRLYPDTKLAIGPSIAD 61

Query: 103 GFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL 162
           GFYYD D   P +++++ +IE +M++I+  + P  +  L  E+A    + K+E YKVE++
Sbjct: 62  GFYYDVDPASPMTAEDMGKIEAEMKKIVKENLPIERFTLPREEAIAFMKEKEEPYKVELI 121

Query: 163 ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYG 222
           E +P    ++ YRQGE+ DLC GPH+ ST  V K +KL+ +AGAYWRG     ML+RIY 
Sbjct: 122 EDLPEGAEISFYRQGEFVDLCAGPHLMSTKDVGKAYKLLNLAGAYWRGSEKNKMLTRIYA 181

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISY 282
           TA+  ++EL  Y+  +EE++KRDHRKL +E+ LF + + G G  F+  KG ++  TL+ Y
Sbjct: 182 TAFFKKEELEAYITMMEEAKKRDHRKLGKELGLFMMHDAGPGFPFFLPKGMQLKNTLLDY 241

Query: 283 MRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
            R    K  Y EI+TP +L++ LW+ SGHWD Y+ NM+       T+ D   +A+KPMNC
Sbjct: 242 WREIHKKAGYVEISTPIILNRSLWETSGHWDHYKNNMYT------TVIDEEDYAIKPMNC 295

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
           PG V V+    +SYR+LP+R+ E G V+R+E SG LHGLMRVR FTQDDAH+F T EQ+ 
Sbjct: 296 PGGVLVYASEPRSYRDLPLRMGELGLVHRHEKSGQLHGLMRVRCFTQDDAHIFMTPEQIK 355

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
           +E   +  LI  +Y  FGF+   V+LSTRPE  +GSD  W+ A   ++  LD +      
Sbjct: 356 DEIKGVATLINEVYTLFGFKYH-VELSTRPEDSMGSDEDWELATEGLRSALDELG----- 409

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
            +   V  G+GAFYGPK ++ L+D IGR WQCGTIQ+DF LP RF   Y  +  EK  P+
Sbjct: 410 -LPYVVNEGDGAFYGPKIDFHLEDCIGRTWQCGTIQLDFQLPQRFELEYTGADGEKHRPI 468

Query: 522 MIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLS 581
           MIHR VFGSIERFIGI+IE+F G  P WL+P+Q  V  I+    +YA ++   L    + 
Sbjct: 469 MIHRVVFGSIERFIGILIEHFAGAFPTWLAPVQVKVLPISDKYADYAAKVYESLSEAGIR 528

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            E D R+E I YKIRE    KIP +++ G KE  E ++ +R   +      SL   I  +
Sbjct: 529 AEVDTRSEKIGYKIREAQTNKIPYMLVVGQKEEEEGTVSVRSRFAGDEGASSLESFIEKI 588

Query: 642 TKESLPPDCQK 652
            KE    + +K
Sbjct: 589 QKEIASKEMRK 599


>gi|158523204|ref|YP_001531074.1| threonyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
 gi|238686905|sp|A9A078|SYT_DESOH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|158512030|gb|ABW68997.1| threonyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
          Length = 637

 Score =  633 bits (1633), Expect = e-179,   Method: Composition-based stats.
 Identities = 278/650 (42%), Positives = 408/650 (62%), Gaps = 21/650 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +T PD S K F    TG  +A+SIS  L ++ VAV ++G   DLS+P+  + ++ +I
Sbjct: 1   MITITLPDSSTKTFDGPVTGEQIAKSISEGLWRECVAVEVDGAAMDLSEPIATDAAVRLI 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T  DP  L ++RHS AH+MAEAVQ ++P+ ++ IGP++EDGFYYD D E P S +  +++
Sbjct: 61  TTRDPEGLHIMRHSAAHVMAEAVQRVFPDAELTIGPVVEDGFYYDIDME-PVSEEIFSRV 119

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E ++++I++   PF+++ +  +KA  L   + + YK EIL  I   + V+LY  G++ DL
Sbjct: 120 EAEIKKIVSAKIPFVRKEV--DKAEALDRYRDQPYKTEILNEI-EDDTVSLYTNGDFTDL 176

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV  TG V+   KL K++GAYWRGD NR  L R+YGTA+ +++EL  YL  +EE++
Sbjct: 177 CRGPHVPHTGFVR-AVKLTKISGAYWRGDQNREQLQRLYGTAFFSKKELDAYLTLIEEAK 235

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLD 301
           KRDHRKL  E+DLF   E+ +G+ F+H  G K++  L+ Y R       Y E+ TP +LD
Sbjct: 236 KRDHRKLGAELDLFSFHEEAAGMPFFHPNGMKLWNALLDYWRLEHRAAGYVEVKTPVMLD 295

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW++SGHW++YR NM+       ++ D   +A+KPMNCPG + ++     SYR+LP+R
Sbjct: 296 RALWEKSGHWENYRENMYV------SVIDDNQYAIKPMNCPGGMLLYKEKRYSYRDLPLR 349

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AE G V+R+E SG L GL RVR F QDDAH+F T +Q+  E   +  L+ +IY  FG  
Sbjct: 350 VAEIGLVHRHELSGVLSGLFRVRAFHQDDAHIFMTPDQIEQEIFGVLKLVETIYSTFGLG 409

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
             + +LSTRP K +G+D  W  A   ++  LD             V  G+GAFYGPK + 
Sbjct: 410 FHL-ELSTRPAKSIGTDEQWVKATAGLRAALDAYGKG------YAVNEGDGAFYGPKIDV 462

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+GR WQCGTIQ+D +LP RF+  Y+++ SEK  PVMIHR ++GSIERF+GI+IE+
Sbjct: 463 HIKDALGRTWQCGTIQLDMSLPERFDLSYIDAGSEKQRPVMIHRVIYGSIERFLGILIEH 522

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           F G  PLWL+P QA++  +    + YA+E+    +   +  E D R+E++N K+R+  I 
Sbjct: 523 FAGKFPLWLAPTQAVLLPLNDDMIPYAREVRQEFEQAGIRTEIDDRSESLNKKVRQAQID 582

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           KIP+II  G KE   R++ +R         VS       + KE +    Q
Sbjct: 583 KIPLIITLGGKEKEARTLSVRTLDGQVRHGVSHEAFFA-VAKEHIAKRLQ 631


>gi|288928013|ref|ZP_06421860.1| threonine--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108]
 gi|288330847|gb|EFC69431.1| threonine--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108]
          Length = 654

 Score =  633 bits (1633), Expect = e-179,   Method: Composition-based stats.
 Identities = 255/650 (39%), Positives = 396/650 (60%), Gaps = 19/650 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+TFPDGSI+ +    TG ++A+SIS +LA+  +++ +NGK  +L+ P+  + +I + 
Sbjct: 1   MIKITFPDGSIREYEKGITGLEIAKSISPALARDVLSIGVNGKTTELNRPINEDATIALY 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ--PFSSDELA 120
             +D        HS AH++AEA+Q+++P +Q   GP +E+GF+YD   +   P S ++  
Sbjct: 61  KWDDEEGKHTFWHSSAHLLAEALQALYPGIQFGFGPAVENGFFYDVMTKDGTPISENDFP 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IE+KM+E   RD   +++ +S   A + F+   + YK E ++       ++ Y QG + 
Sbjct: 121 KIEEKMREFAKRDEAIVRREVSKSDALKEFKEDGQEYKCEHIDLDLEDGTISTYSQGAFT 180

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ STG +K   KL  VAGA+WRGD+ +  L+RIYG  +  ++ L +YL  LEE
Sbjct: 181 DLCRGPHLMSTGPIK-AIKLTSVAGAFWRGDAQKDQLTRIYGITFPKKKMLDEYLVMLEE 239

Query: 241 SEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++KRDHRK+ +EM+LF  +   G G+  W  KG ++   L + +R+  K   Y+E+ TP 
Sbjct: 240 AKKRDHRKIGKEMELFMFSERVGKGLPIWLPKGTELRLRLQNMLRKIQKRFGYQEVITPH 299

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +  ++L+  SGH+  Y  + F       T ++   + LKPMNCP H  VF    +SY++L
Sbjct: 300 IGSKNLYVTSGHYAHYGKDSFQ---PIHTPEEDEEYMLKPMNCPHHCEVFAWKPRSYKDL 356

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG+VYR E SG LHGL RVR FTQDDAH+FC  EQ+ NE L++ ++I +++K F
Sbjct: 357 PLRIAEFGTVYRYEKSGELHGLTRVRSFTQDDAHIFCRPEQVKNEFLRVMDIIQAVFKIF 416

Query: 419 GFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            F+    ++S R  K     +GSD +W+++E  +      I    +  ++  +  GE AF
Sbjct: 417 HFDDFEAQISLRDPKNTTKYIGSDEVWEESEQAI------IDACKEKGLDAKIAYGEAAF 470

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK ++++KDAIGR WQ GTIQVD+NLP RF   Y    + K  PVM+HRA FGS+ERF
Sbjct: 471 YGPKLDFMIKDAIGRRWQLGTIQVDYNLPERFKLEYTAEDNTKKTPVMVHRAPFGSMERF 530

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             ++IE+  G+ PLWL P Q  +  I+    +YAQ +A    S  +    D RNE I  K
Sbjct: 531 TAVLIEHTAGHFPLWLIPDQVAILPISEKYNDYAQRVAKYFDSVGVRATLDVRNEKIGRK 590

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IR++ IK++P +++ G+KEA+E  + +R+ G      +S+ +    +  E
Sbjct: 591 IRDNEIKRVPYMVVVGEKEAAEGLVSMRKQGGGEQATMSMEEFAKRINDE 640


>gi|317476770|ref|ZP_07936013.1| threonyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA]
 gi|316906945|gb|EFV28656.1| threonyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA]
          Length = 646

 Score =  633 bits (1633), Expect = e-179,   Method: Composition-based stats.
 Identities = 258/649 (39%), Positives = 392/649 (60%), Gaps = 19/649 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+TFPDGS++ +    TG  +AESIS  LA+  +A  +NG+  DL  P+  +  + + 
Sbjct: 1   MIKITFPDGSVREYNEGVTGLQIAESISSRLAQDVLACGVNGETYDLGRPISEDAEVVLY 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
             ED +      H+ AH++AEA+Q ++P +Q  IGP IE+GFYYD D  E      +L  
Sbjct: 61  KWEDEQGKHAFWHTSAHLLAEALQELYPGIQFGIGPAIENGFYYDVDPGEATIKEADLPA 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEKKM E++A+    +++ +S   A ++F  + E YK E++  +    ++T Y QG + D
Sbjct: 121 IEKKMAELVAKKEAVVRESISKTDALKMFGDRGETYKCELISEL-EDGHITTYTQGAFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ +   +K   KL  VAGAYWRG  +R M++RIYG  +  ++ L +YL  LEE+
Sbjct: 180 LCRGPHLMTIAPIK-AIKLTSVAGAYWRGQEDRKMMTRIYGITFPKKKMLDEYLVLLEEA 238

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           +KRDHRK+ +EMDLF  ++    G+  W  KG  +   L  ++RR + + DY+E+  P +
Sbjct: 239 KKRDHRKIGKEMDLFMFSDTVGKGLPMWLPKGAALRIRLQEFLRRIQARYDYQEVMCPPI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            ++ L+  SGH+  Y  + F       T ++   + LKPMNCP H  ++ +  +SY++LP
Sbjct: 299 GNKLLYITSGHYAKYGKDSFQ---PIHTPEEGEEYFLKPMNCPHHCMIYKNSPRSYKDLP 355

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +RLAEFG+V R E SG LHGL RVR FTQDDAH+FC  +Q+ +E L++ ++I  +++   
Sbjct: 356 LRLAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKDEFLRVMDIISIVFQSMH 415

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           FE    ++S R     EK +GSD  W+ AE  +    +      +  +   V  GE AFY
Sbjct: 416 FENFEAQISLRDKVNREKYIGSDENWEKAEQAIIEACE------EKGLKAKVEYGEAAFY 469

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDAIGR WQ GTIQVD+NLP RF   Y  + ++K  PVMIHRA FGS+ERF+
Sbjct: 470 GPKLDFMVKDAIGRRWQLGTIQVDYNLPERFQLEYTGADNQKHRPVMIHRAPFGSMERFV 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE+  G  PLWL+P Q  +  I+    +YAQE+ + LK + +    D RNE I  KI
Sbjct: 530 AVLIEHTAGKFPLWLTPDQVAILPISEKFNDYAQEVKDYLKRYDVRAIVDERNEKIGRKI 589

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R++ +K+IP ++I G+KEA  R + +R+ G      +   +    + +E
Sbjct: 590 RDNEMKRIPYMLIVGEKEAENREVSVRKQGEGDQGTMKFEEFAKKVNEE 638


>gi|291279885|ref|YP_003496720.1| threonyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
 gi|290754587|dbj|BAI80964.1| threonyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
          Length = 640

 Score =  633 bits (1633), Expect = e-179,   Method: Composition-based stats.
 Identities = 283/642 (44%), Positives = 419/642 (65%), Gaps = 16/642 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           +++  PDG++      A   +VA  IS +LAKKA+A  +NG + D+   + +G ++ IIT
Sbjct: 1   MRINLPDGNVIEVSDDADAKEVASKISNTLAKKAIAAEVNGNLVDIYYKLSDGDTVRIIT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +DP +L ++RHS AH+MA+AVQ ++ +V+V IGP+IEDGFYYDFDKE PF+  +L +IE
Sbjct: 61  EKDPEALEILRHSTAHLMAQAVQRLFKDVKVTIGPVIEDGFYYDFDKETPFTETDLEKIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           ++M++I   + P  ++ L  E+A +LF+ K E YK+EI+  I   E V++Y QGE+ DLC
Sbjct: 121 EEMKKIAQENLPIRRKELKKEEAIKLFKDKGEDYKIEIINEI-DDEYVSVYEQGEFVDLC 179

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG++K F KL+ VAGAYWRGD N  ML RIYGT+W  + EL  YL  LEE++K
Sbjct: 180 RGPHLESTGKIKHF-KLLSVAGAYWRGDENNKMLQRIYGTSWFKKSELDDYLKRLEEAKK 238

Query: 244 RDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLD 301
           RDHRKL ++++LF    E G+G+I W  KG +I   + ++ + +  K+ YE + TP +  
Sbjct: 239 RDHRKLGKDLELFSTFDEIGAGLICWFPKGARIRSIIEAFWKEEHFKNGYEMLYTPHIGK 298

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             LW+ SGH   Y+ NM++         D   + +KPMNCP H+ ++   ++SYR+LP+R
Sbjct: 299 STLWETSGHLAFYQENMYSPMDI-----DGNEYFIKPMNCPFHIMIYKSKVRSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
            AE G+VYR E SG LHGL+RVRGFTQDDAH+ CT+EQ+ +E  ++ N  + ++K FGFE
Sbjct: 354 WAELGTVYRYERSGVLHGLLRVRGFTQDDAHIICTQEQIIDEIKEVLNFSLRMWKAFGFE 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            I   ++TRPEK VG DA+W+ A   ++G +          I+  +  G GAFYGPK + 
Sbjct: 414 SIKGYIATRPEKSVGDDAMWEKATQSLEGAIKDSG------IDFEIDEGGGAFYGPKIDL 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDAIGR+WQ  TIQ DFNLP RF+  Y++   ++  P M+HRA+ GS+ERF G++IE+
Sbjct: 468 KIKDAIGREWQMTTIQFDFNLPERFDMTYIDKDGKEKRPFMVHRALLGSLERFFGVLIEH 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  P+WL+PIQ  +  ++ +  EY +EI   LK   + +E D RNE I YKIRE  ++
Sbjct: 528 YAGAFPIWLAPIQVRIINVSDAQYEYCKEIEKKLKEEGIRVEFDSRNEKIGYKIREAQLQ 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           KIP +II G+ E   +++ +R         +   + I +L +
Sbjct: 588 KIPHMIIIGNNEVEAKTVSVRLRNGENKNNLDFYEYISVLKE 629


>gi|89891844|ref|ZP_01203345.1| threonyl-tRNA synthetase [Flavobacteria bacterium BBFL7]
 gi|89515749|gb|EAS18550.1| threonyl-tRNA synthetase [Flavobacteria bacterium BBFL7]
          Length = 648

 Score =  633 bits (1632), Expect = e-179,   Method: Composition-based stats.
 Identities = 256/649 (39%), Positives = 385/649 (59%), Gaps = 19/649 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+T PDGSIK      T  DVA SIS+ LA+  ++ + NG   +   P+  +GS+ + 
Sbjct: 1   MIKITLPDGSIKEMENGTTPMDVAMSISQGLARNVISASFNGIKVETKTPLTEDGSLVLF 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
           T  +P       HS +HIMA+A++ ++P V + IGP I++GFYYD D KE   S  ++ +
Sbjct: 61  TFSNPEGKEAFWHSTSHIMAQAIEELFPGVSLTIGPAIDNGFYYDIDFKEHSISESDIPK 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE +M EI      F  + +S   A + ++ +   YKVE++E++   E +T      + D
Sbjct: 121 IEARMLEIARGKHEFTMRSVSKADALQFYKDQNNPYKVELIENLTDGE-ITFCDHDTFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG H+ +TG +K   K+M +AGAYWRGD N P L+R+YGT++  Q++L +YL  LEE+
Sbjct: 180 LCRGGHIPNTGIIK-AVKIMSIAGAYWRGDENNPQLTRMYGTSFPKQKDLKEYLELLEEA 238

Query: 242 EKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           +KRDHRKL +E+ LF      G G+  W  KG  + + L  ++++ + K  YE + +P +
Sbjct: 239 KKRDHRKLGKELQLFTFSQRVGQGLPLWLPKGAALRERLEDFLKKAQKKAGYEMVVSPHI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             + L+  SGH++ Y A+ F       T  D   F LKPMNCP H  ++     SYR+LP
Sbjct: 299 GSKELYVTSGHYEKYGADSFQ---PIKTPSDDEEFLLKPMNCPHHCEIYKSSQWSYRDLP 355

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
            R AEFG+VYR E SG LHGL RVRGFTQDDAH+FC  EQ+  E   + +L++ ++   G
Sbjct: 356 KRFAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCMPEQLDKEFKAVIDLVLYVFGSLG 415

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           FE    ++S R  K     +G    W+ AEN +              ++  +  GE AFY
Sbjct: 416 FENFTAQVSIRDPKKPEKYIGDTKNWEIAENAIISAAKD------KGLDYVIEEGEAAFY 469

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDA+GR WQ GTIQVD+NLP RF+ +Y  + +E   PVMIHRA FGS+ERFI
Sbjct: 470 GPKLDFMVKDALGRSWQLGTIQVDYNLPERFDLWYKGADNESHRPVMIHRAPFGSMERFI 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            I++E+  GN PLWL P Q  + +++     YA+++AN L+++ +    D R ET+  KI
Sbjct: 530 AILLEHTGGNFPLWLMPEQCTILSLSEKYENYAKQVANSLENNEIRTTIDNRAETMGKKI 589

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           RE  + K+P ++I G++E  + +I +R+ G      +S+     ++  E
Sbjct: 590 REAEMNKLPYMLIVGEQEEKDGTISVRKHGGDDLGSMSVETFSQLIKDE 638


>gi|91087799|ref|XP_967345.1| PREDICTED: similar to RH56418p [Tribolium castaneum]
          Length = 707

 Score =  633 bits (1632), Expect = e-179,   Method: Composition-based stats.
 Identities = 244/643 (37%), Positives = 364/643 (56%), Gaps = 22/643 (3%)

Query: 5   IKLTFPDGSIKN-FPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           IK+T PDG +        T  D+A+ IS+ LA   V   +NG + DL  P+  +  +E++
Sbjct: 69  IKVTLPDGKVVEGVAWKTTAYDIAKGISQGLADNCVISKVNGVLWDLDRPLEGDCKLELL 128

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQ 121
             ++P + +V  HS AHI+ EA++ ++    +  GP IE GFYYD   E +  S+ +   
Sbjct: 129 KFDNPEAQSVFWHSTAHILGEALERVYGGC-LCYGPPIESGFYYDMFLEDKGISAGDFPY 187

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +E  M++I     PF +  +  E   E+F+     +KV IL         T+YR G   D
Sbjct: 188 LENLMKQITKEKQPFERLEMKKEDLLEMFKY--NPFKVRILNEKVDTPTTTVYRCGPLID 245

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHVR TG++K   K+ K +  YW G ++   L R+YG ++   ++L ++  F EE+
Sbjct: 246 LCRGPHVRHTGKIK-ALKVTKNSSTYWEGKADAETLQRVYGISFPDNKQLKEWEKFQEEA 304

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVL 300
            KRDHRK+ R+ +LF   E   G  F+  +G  I+ TLI++++++ +   ++E+ +P + 
Sbjct: 305 AKRDHRKIGRDQELFFFHELSPGSCFFQPRGAHIYNTLINFIKKEYRKRGFQEVISPNIF 364

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  LWQ SGHW  Y  NMF+     D       FALKPMNCPGH  +F++  +S+RELP+
Sbjct: 365 NAKLWQVSGHWAHYADNMFSFDVEKDK------FALKPMNCPGHCLIFDNRTRSWRELPL 418

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLA+FG ++RNE SG+L GL RVR F QDDAH+FC  E +  E     + +  +Y  FGF
Sbjct: 419 RLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCALEHIKQEIKGALDFLSHVYSVFGF 478

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
              +V LSTRPEK +G  A+W+ AE  +   LD             V  G+GAFYGPK +
Sbjct: 479 TFNVV-LSTRPEKYLGDLAMWEQAEKALSEGLDDFGAPW------SVNPGDGAFYGPKID 531

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
             + DA+ R  QCGTIQ+DF LP RFN  YV+   EK  PV+IHRA+ GS+ER I I+ E
Sbjct: 532 ITVHDALKRAHQCGTIQLDFQLPIRFNLSYVSESGEKKRPVIIHRAILGSVERMIAILTE 591

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FRNETINYKIREHS 599
           +  G  P W+SP QA+V  +  +  EYAQ++   L       E D    +T+N KIR   
Sbjct: 592 SCGGKWPFWISPRQAMVIPVGPTYDEYAQDVKKKLYEAGFMAEVDTDAGDTMNKKIRNAQ 651

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           + +   I++ G+KE S +++ +R   +    ++S+   I    
Sbjct: 652 LAQFNFILVVGEKERSSQTVNVRTRDNIVHGEISVEGLIEKFK 694


>gi|222151594|ref|YP_002560750.1| threonyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
 gi|222120719|dbj|BAH18054.1| threonyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
          Length = 642

 Score =  632 bits (1631), Expect = e-179,   Method: Composition-based stats.
 Identities = 256/650 (39%), Positives = 405/650 (62%), Gaps = 22/650 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           S+I++ FPDG++K+F    T  D+A SIS  L KKA+A   NG++ DLS  +  +G IEI
Sbjct: 2   SEIQIKFPDGNVKSFESGVTTEDIAGSISPGLRKKALAGKFNGQMVDLSTALETDGDIEI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           ITPE P  + V+RHS AH+MA+A++ ++ +V   +GP+IE+GFYYD D E   SS++L +
Sbjct: 62  ITPESPEGIEVLRHSTAHLMAQALKRMYGDVHFGVGPVIEEGFYYDIDTEHKISSEDLPE 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK M++I+  +    ++ +S E+A+++     + YK+E++++IP  E+VT+Y QGE+ D
Sbjct: 122 IEKTMRQIVGENIKIERRVVSREEAKKI--FADDPYKMELIDAIPEDEHVTIYSQGEFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG HV ST ++K+F KL+  AGAYWRGD++  ML RIYGTA+  ++ L ++L  LEE 
Sbjct: 180 LCRGVHVPSTAKIKEF-KLLSTAGAYWRGDADNKMLQRIYGTAFFDKKALKEHLKILEER 238

Query: 242 EKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQV 299
           ++RDHRK+ +E++LF  ++  G+G+  W   G  I + L  Y+  K     Y+ + TP +
Sbjct: 239 KERDHRKIGKELELFTTSQLVGAGLPLWLPNGATIRRELERYIVDKEVALGYDHVYTPIM 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHWD Y+ +MF     ++         L+PMNCP H+ V+ +   SYRELP
Sbjct: 299 GSVDLYKTSGHWDHYQEDMFPPMEMENEA-----LVLRPMNCPHHMMVYKNKPHSYRELP 353

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG++ GL RVRG T +DAH+F   +Q+  E +++  L+I +YKDF 
Sbjct: 354 IRIAELGMMHRYEASGAVSGLQRVRGMTLNDAHIFVRPDQIKEEFIRVVQLVIDVYKDFK 413

Query: 420 FEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           F++   +LS R     EK    D +W+ A+ ++K  +D +       ++     GE AFY
Sbjct: 414 FKEYKFRLSYRDSEDTEKYFQDDEMWERAQLMLKEAVDEMG------LDYEEAPGEAAFY 467

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G++    T+Q+DF LP RF+  Y+ S  EK  PV+IHR V  ++ERF+
Sbjct: 468 GPKLDVQVKTALGKEETLSTVQLDFLLPERFDLEYIGSDGEKHRPVVIHRGVISTMERFV 527

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             + E +KG  PLWL+P Q  +  +++    +YA+++ + LKS  +    D R E + YK
Sbjct: 528 AFLTEEYKGAYPLWLAPNQLEIIPVSNEVHYDYARKLYDELKSQGVRCHIDDREEKMGYK 587

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IRE  + K+P  ++ GDKE     + +R++G   ++ +   D I  +  E
Sbjct: 588 IREAQMHKVPYQVVVGDKEIENNEVNVRQYGKKESKTIDRDDFIWSIVDE 637


>gi|269123175|ref|YP_003305752.1| threonyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
 gi|268314501|gb|ACZ00875.1| threonyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
          Length = 633

 Score =  632 bits (1631), Expect = e-179,   Method: Composition-based stats.
 Identities = 301/644 (46%), Positives = 425/644 (65%), Gaps = 19/644 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            +K+T PDG++K    + T  + A++IS SLAKK V    NG   D++  + ++G++E+I
Sbjct: 1   MLKITLPDGALKEVE-NMTVIEFAKTISTSLAKKTVGAFFNGTQVDITYNLDKDGTLELI 59

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +  + L ++RHS AH+MAEAV S++P  +V IGP IE+GFYYDFD E+PF+ ++L +I
Sbjct: 60  TTDSKKGLEILRHSSAHVMAEAVMSLFPNTKVTIGPAIENGFYYDFDTERPFTEEDLVKI 119

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M++II  +  F ++  S EKAR  FE+  + YKVEIL+S+   E  T+Y QG++ DL
Sbjct: 120 EKEMKKIIKLNEKFSREVWSREKARAYFENAGQNYKVEILDSLEEDE-FTIYTQGKFVDL 178

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRG HV STG +K F KL+  AGAYWRGDSN  ML RIYGT++ +Q EL  Y+  +EE+E
Sbjct: 179 CRGTHVPSTGYIKAF-KLLNAAGAYWRGDSNNKMLQRIYGTSFYSQDELDAYIKQVEEAE 237

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLD 301
           KRDHRKL ++++LF I E G G  F+  KG ++F  L    R    K  Y+EI TP +LD
Sbjct: 238 KRDHRKLGKQLNLFFIDEHGPGFPFFMPKGMRLFNRLQQLWRIEHNKQGYDEIRTPIMLD 297

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW +YR NM+  +       D + +A+KPMNCPG +  + + L SY++LP++
Sbjct: 298 KELWEISGHWFNYRENMYVSEI------DEKVYAIKPMNCPGSIIAYKNNLHSYKDLPLK 351

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
            AE G V+R+E SG+LHGLMRVR FTQDDAHVFCT +Q+ +   +I NL    YK FGF 
Sbjct: 352 YAEMGHVHRHEFSGALHGLMRVRAFTQDDAHVFCTPDQIKDSIKEIVNLYDKYYKLFGF- 410

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LST+PEK VG   +W+ +E  ++  L  +       I+  +  G+GAFYGPK ++
Sbjct: 411 DFHVELSTKPEKAVGDAKVWEISERALEETLKELN------IDYRINAGDGAFYGPKIDF 464

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KD+IGR WQ GTIQ+D NLP RFN  Y+    EK   VMIHRA+FGS+ERFIGI+IE+
Sbjct: 465 KMKDSIGRIWQTGTIQLDMNLPKRFNMSYIGKDGEKHETVMIHRAMFGSLERFIGILIEH 524

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH-SI 600
           + G  P+WL+P Q  + TI++  VEYA ++   L    +  E D R+E I YKIRE    
Sbjct: 525 YAGAFPVWLAPTQVKIMTISAEQVEYATKLHKKLIDLGIYSELDIRDEKIGYKIREANGE 584

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +KIP+ ++ G  E  E ++ +RRFGST +   ++ + I  L  E
Sbjct: 585 QKIPVQLVIGKNEVLENTVNVRRFGSTDSVTKNVDEFINELLDE 628


>gi|325478873|gb|EGC81983.1| threonine--tRNA ligase [Anaerococcus prevotii ACS-065-V-Col13]
          Length = 640

 Score =  632 bits (1631), Expect = e-179,   Method: Composition-based stats.
 Identities = 261/645 (40%), Positives = 394/645 (61%), Gaps = 17/645 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            I +  PDGS K +       DV + IS  L + AV   +NG+V   ++P+  +   +++
Sbjct: 1   MINIKLPDGSNKEYESGVLVGDVTKDISMGLFRAAVGAVVNGRVMGFAEPIEEDCDFKVV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
             +D     +  H+ +H+MA A++ ++P+ + AIGP I+DGFYYD + +  F  ++L +I
Sbjct: 61  KFDDKEGKEIFWHTSSHVMAAAIKGLYPDTKFAIGPAIDDGFYYDMELDHRFVPEDLEKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE-WFD 181
           EKKM EI  RD    +  +S ++A E+FE + + YKVE++  +   E +TLY+ G+ + D
Sbjct: 121 EKKMLEIAKRDLKLERIEISRDEALEMFEKEGQDYKVELINDLAEDELITLYKMGDAFTD 180

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ ST Q+K   K+  +AGAYWRGDS+R ML RIYG  +   ++L +Y    +E 
Sbjct: 181 LCRGPHLLSTKQIK-AVKIKTIAGAYWRGDSDRQMLQRIYGITFEKAKQLEEYEELQKEI 239

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
           EKRDHRK+ REM+LF   E+G G  F+H  G  +   L+ +    + +  Y EI TP +L
Sbjct: 240 EKRDHRKIGREMNLFAFHEEGPGFPFFHPNGMILMNELLGWWTDVLNENGYGEIKTPLIL 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ LW +SGHWD Y+ NM+       T  D   +A+KPMNCPG V  +     SYR+LP+
Sbjct: 300 NEALWHRSGHWDHYKENMYF------TEIDGEAYAVKPMNCPGSVLTYAANQHSYRDLPI 353

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLAE+G V+R+E SG+LHGL RVR FTQDDAHV+CT  Q+  E  ++ +L   +Y  FGF
Sbjct: 354 RLAEYGQVHRHELSGTLHGLFRVRTFTQDDAHVYCTPNQIKEEVYRMIDLADLLYSTFGF 413

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           +  + +LSTRP+  +G    WD AE  +K  L+      +  I   +  G+GAFYGPK +
Sbjct: 414 KYTI-ELSTRPDDFMGDIKDWDFAEEQLKKALE------ERGIEYEINPGDGAFYGPKID 466

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           + L DA  R+WQCGTIQ+DF LP  F+  Y++ + EK  PVM+HRA+ GSIERFIG++ E
Sbjct: 467 FHLLDAAKREWQCGTIQLDFQLPQNFDLTYIDENGEKQRPVMLHRALLGSIERFIGVLTE 526

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +F G  PLWL+P Q  +  ++   ++YA+E+   +K     +  D+RNE + YKIR+  +
Sbjct: 527 HFAGRFPLWLNPQQVEIIPVSDKFIDYAEELKQKIKEAGFRVNIDYRNEGVGYKIRQAQL 586

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
            +   +++ G+KE +   + +R      T  VSL + I  +++E 
Sbjct: 587 MRTNYMLVVGEKEETSGKLTVRNRDGEETPDVSLDEFIEKISEEK 631


>gi|160883804|ref|ZP_02064807.1| hypothetical protein BACOVA_01776 [Bacteroides ovatus ATCC 8483]
 gi|237722137|ref|ZP_04552618.1| threonyl-tRNA synthetase [Bacteroides sp. 2_2_4]
 gi|299149166|ref|ZP_07042227.1| threonine--tRNA ligase [Bacteroides sp. 3_1_23]
 gi|156110889|gb|EDO12634.1| hypothetical protein BACOVA_01776 [Bacteroides ovatus ATCC 8483]
 gi|229447947|gb|EEO53738.1| threonyl-tRNA synthetase [Bacteroides sp. 2_2_4]
 gi|298512833|gb|EFI36721.1| threonine--tRNA ligase [Bacteroides sp. 3_1_23]
          Length = 646

 Score =  632 bits (1631), Expect = e-179,   Method: Composition-based stats.
 Identities = 259/649 (39%), Positives = 393/649 (60%), Gaps = 19/649 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+TFPDGS++ +     G  +AESIS  LA++ +A  +NG+  DL  P+  + +  + 
Sbjct: 1   MIKITFPDGSVREYNEGVNGLQIAESISSRLAQEVLACGVNGETYDLGRPINEDANFVLY 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
             +D        H+ AH++AEA+Q ++P +Q  IGP IE+GFYYD D  E      +L  
Sbjct: 61  KWDDEEGKHAFWHTSAHLLAEALQELYPGIQFGIGPAIENGFYYDVDPGEAVIKESDLPA 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE KM E+ A+    +++ ++   A ++F  + E YK E++  +    ++T Y QG + D
Sbjct: 121 IEAKMLELAAKKEDVVRKSIAKTDALKMFGDRGETYKCELISEL-EDGHITTYTQGAFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ +T  +K   KL  VAGAYWRG  +R ML+RIYG  +  ++ L +YL  LEE+
Sbjct: 180 LCRGPHLMTTAPIK-AIKLTSVAGAYWRGHEDRKMLTRIYGITFPKKKMLDEYLVLLEEA 238

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           +KRDHRK+ +EM LF  +E    G+  W  KG  +   L  ++RR + + DY+E+ TP +
Sbjct: 239 KKRDHRKIGKEMQLFMFSETVGKGLPMWLPKGTALRLRLQEFLRRIQTRYDYQEVITPPI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            ++ L+  SGH+  Y  + F       T ++   + LKPMNCP H  ++ +  +SY++LP
Sbjct: 299 GNKLLYVTSGHYAKYGKDAFQ---PIHTPEEGEEYFLKPMNCPHHCEIYKNFPRSYKDLP 355

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AEFG+V R E SG LHGL RVR FTQDDAH+FC  EQ+ +E L++ ++I  +++   
Sbjct: 356 LRIAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPEQVKDEFLRVMDIISIVFRSMD 415

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           F+    ++S R     EK +GSD  W+ AE  +      I+  ++  +   +  GE AFY
Sbjct: 416 FQNFEAQISLRDKVNREKYIGSDDNWEKAEQAI------IEACAEKGLPAKIEYGEAAFY 469

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDAIGR WQ GTIQVD+NLP RF   Y+ S ++K  PVMIHRA FGS+ERF+
Sbjct: 470 GPKLDFMVKDAIGRRWQLGTIQVDYNLPERFELEYMGSDNQKHRPVMIHRAPFGSMERFV 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE+  G  PLWL+P Q ++  I+    EYA+++   LK H +    D RNE I  KI
Sbjct: 530 AVLIEHTAGKFPLWLTPEQVVILPISEKFNEYAEQVKMYLKIHEIRAIVDDRNEKIGRKI 589

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R++ +K+IP ++I G+KEA    + +RR G      +   +   IL +E
Sbjct: 590 RDNEMKRIPYMLIVGEKEAENGEVSVRRQGEGDKGTMKFEEFAKILNEE 638


>gi|78357681|ref|YP_389130.1| threonyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|123741221|sp|Q30Y11|SYT_DESDG RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|78220086|gb|ABB39435.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Desulfovibrio
           desulfuricans subsp. desulfuricans str. G20]
          Length = 644

 Score =  632 bits (1630), Expect = e-179,   Method: Composition-based stats.
 Identities = 272/642 (42%), Positives = 405/642 (63%), Gaps = 20/642 (3%)

Query: 12  GSIKNFPVHATGSDVAES-ISRSLAKKAVAVAINGKVCDLSDPVREG--SIEIITPEDPR 68
           GS+      A+  DV +  +S    KK +A    G + DL+  V     ++E +  + P 
Sbjct: 7   GSVVEVESGASCRDVLKQALSGKKFKKVLAARCGGTMLDLTATVPTACETLEPVYADSPE 66

Query: 69  SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQE 128
            L +IRHS AH+MA+AVQ ++P V+V IGP IE+GFYYDFD E+PF++D+L  IE +M +
Sbjct: 67  GLGLIRHSAAHVMADAVQRLFPGVKVTIGPAIENGFYYDFDYERPFTADDLEAIEAEMDK 126

Query: 129 IIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           II    PF +  +S ++A+++F    E YK+E+++++P  + V++YR G++ DLCRGPH+
Sbjct: 127 IIKAAHPFERSVMSKDEAKKMFADMGETYKLELIDAVP-DDIVSIYRSGDFVDLCRGPHI 185

Query: 189 RSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRK 248
             TG +  F KLM VAGAYWRGD    MLSR+YGTA+  ++EL  YL  +EE++KRDHRK
Sbjct: 186 PDTGCINAF-KLMSVAGAYWRGDEKNAMLSRVYGTAFPDEKELKSYLNRIEEAKKRDHRK 244

Query: 249 LAREMDLFHIAEDG-SGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQ 306
           L  ++DLF   E+G SG+++WH KG  +   L  + R   +K  Y+ + TPQ+L + LW+
Sbjct: 245 LGTQLDLFSFQEEGGSGMVYWHPKGALVRAILEDFERKEHLKRGYQIVQTPQILRRELWE 304

Query: 307 QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFG 366
           +SGH+D+YR NM+       T  D + + +KPMNC  H+ ++     SYR+LPVRL E G
Sbjct: 305 KSGHYDNYRENMYF------TDIDEQPYGVKPMNCVAHMLIYKSRSHSYRDLPVRLFELG 358

Query: 367 SVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK 426
            V+R+E SG LHGL+RVR FTQDDAH+ CT +Q+ +E + + N +  +   FGFE  M +
Sbjct: 359 VVHRHEKSGVLHGLLRVRQFTQDDAHIICTPDQLESEIVGVLNFVRDVMGVFGFEYSM-E 417

Query: 427 LSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDA 486
           +STRPEK +GSD  WD A + +   L+         +   +  G+GAFYGPK +  L+D 
Sbjct: 418 VSTRPEKSIGSDEDWDRATSALVKALE------GQGLPYEINEGDGAFYGPKIDVKLRDC 471

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNL 546
           +GR+WQC T+Q DF LP RF+  Y+    E+  PVM+HR + GS+ERFIG++ E+F G  
Sbjct: 472 LGREWQCATVQCDFTLPDRFDLVYIGQDGERHRPVMVHRVILGSVERFIGVLTEHFAGAF 531

Query: 547 PLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPII 606
           P WL+P+QA + T+T +  E+A+E    L +  + +E D RNE + YK+RE  ++KIP I
Sbjct: 532 PTWLAPVQARLLTVTDAQNEFAEEARAALMAQGIRVEVDTRNEKLGYKVREAQLEKIPYI 591

Query: 607 IICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
           ++ GDKE   R + +R          +L + + I+  +   P
Sbjct: 592 LVIGDKEVEARGVNVRLRKGDNLGLKTLDEVVDIIRADCEEP 633


>gi|86158405|ref|YP_465190.1| threonyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|123736663|sp|Q2IJC0|SYT_ANADE RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|85774916|gb|ABC81753.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase
           [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 650

 Score =  632 bits (1630), Expect = e-179,   Method: Composition-based stats.
 Identities = 275/657 (41%), Positives = 391/657 (59%), Gaps = 17/657 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAE-SISRSLAKKAVAVAINGKVCDLSDPV-REGS 58
           M   +K+T PDGS K  P      D  +  I   LAK A    ++G   DLS  + R+  
Sbjct: 1   MSDLVKVTLPDGSQKEAPRGTPVIDFVKGQIGAGLAKAAYFAKLDGAPVDLSRALDRDAR 60

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           +EI+T   P +L V RH  AH+MA  VQ ++P  QV IGP IEDGFYYDF +E PF+ ++
Sbjct: 61  LEIVTTRSPEALEVARHDAAHVMASVVQKLYPGTQVTIGPAIEDGFYYDFARETPFTPED 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKE--NVTLYRQ 176
           L +IEK   E I  D PF++  +S E A  LFE   E YKVEI++ I AK    +TLY+ 
Sbjct: 121 LEKIEKATNEAIKADLPFVRSEISMEAALALFEGMGERYKVEIVKDIAAKGAKTLTLYKH 180

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           G+W D C GPH  STG++    KL+ VAGAYWRGD+   ML RIYGTA+  ++EL  +L 
Sbjct: 181 GDWVDFCLGPHGPSTGRIGVV-KLLNVAGAYWRGDAKNAMLQRIYGTAFFDKKELDAHLA 239

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEIN 295
            LEE +KRDHR+L  ++ LF   E   G  FW   G  ++  L   MRR  +K+ Y+E+ 
Sbjct: 240 KLEEVKKRDHRRLGPQLGLFTFHEYAPGAPFWLPAGTVLYNVLEDAMRRLVLKNGYQEVK 299

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTI----KDLRTFALKPMNCPGHVAVFNHG 351
           TP + ++ LW+ SGHW  YR NMF V  ++       +D  +F+LKPMNCP H  ++   
Sbjct: 300 TPLLFNKRLWETSGHWGKYRENMFLVVDSESDPALALEDRCSFSLKPMNCPSHHLIYRMD 359

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI 411
            +SYRELPVR     +++RNE SGSL GL RVR F QDDAH++  +EQ+ +E L+I  L+
Sbjct: 360 KRSYRELPVRYFTTDALHRNEASGSLGGLTRVRQFEQDDAHIYLREEQVTDEVLRIFELM 419

Query: 412 ISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
             +Y  FG        STRPE+R+G DALWD AE +++  LD         +   +  G+
Sbjct: 420 KVVYGAFGLG-FEATFSTRPEQRIGDDALWDRAEALLRKSLDATG------LKWTLNPGD 472

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
           GAFYGPK + ++ D++GR WQ  TIQ+D+  P RF+  +V   +++  PV+IHRA++GS 
Sbjct: 473 GAFYGPKIDMLVTDSLGRRWQTCTIQLDYAAPERFDLTFVGEDNKEHRPVVIHRAIYGSF 532

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           ERFI I+ E++ G  P WL+P+QA V T++     +A+E A  L++    +E D  ++ +
Sbjct: 533 ERFIAILTEHYAGAFPAWLAPVQARVVTVSDRFDAWAREAAAALQARGWRVEVDGSSDKL 592

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
             KIR   + KIP  ++ G+KE   R +  RR G    + + L     ++ +E+  P
Sbjct: 593 GAKIRNAQLAKIPFTLVVGEKEVEARGVSPRRHGGEDLKTMPLETFAELMAREATAP 649


>gi|21674935|ref|NP_663000.1| threonyl-tRNA synthetase [Chlorobium tepidum TLS]
 gi|34222753|sp|Q8KAN0|SYT_CHLTE RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|21648164|gb|AAM73342.1| threonyl-tRNA synthetase [Chlorobium tepidum TLS]
          Length = 657

 Score =  632 bits (1630), Expect = e-179,   Method: Composition-based stats.
 Identities = 252/651 (38%), Positives = 381/651 (58%), Gaps = 16/651 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEII 62
            + +T PDGS + +    TG ++AESI + LA+ A+A  I+GK  DL  PV E + + II
Sbjct: 10  QVIITLPDGSERTYSSGVTGLEIAESIGKKLAEAALAFTIDGKPRDLDTPVTENARVSII 69

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T + P    +  HS +H+MA A++ ++P  +   GP IE GFYYD   E  F+ ++L  I
Sbjct: 70  TFDSPEGKEIFWHSSSHLMAHAIEELFPGAKFGAGPAIEQGFYYDIACEHRFNEEDLRAI 129

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELF-ESKKEAYKVEILES-IPAKENVTLYRQGEWF 180
           E KM EI  R+    ++ +  E+A E F   +K+ YKVEILE  +     V++Y Q  + 
Sbjct: 130 EAKMLEISKRNLSINREEMPREQAIEYFSNERKDPYKVEILEDTLKDVPTVSVYHQDGFA 189

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLC GPH+ STG+VK    L  ++ +YWRGDS+R  + RIYG  + + + L +++  LEE
Sbjct: 190 DLCSGPHLPSTGKVK-AVLLTNISSSYWRGDSSRETMQRIYGITFPSDKLLKEHIARLEE 248

Query: 241 SEKRDHRKLAREMDLFH-IAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQ 298
           + KRDHRKL  E+ LF    E GSG+  W   G  I   L ++++  + K  Y  + TP 
Sbjct: 249 ARKRDHRKLGAELGLFMLTPEVGSGLPIWLPNGAIIRNELETFLKAEQRKRGYVPVYTPH 308

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           + +  L+++SGH+  Y  + F      D       + LKPMNCP H  +++  L+SYR+L
Sbjct: 309 IGNIELYKRSGHYPYYSDSQFPPLTYKDETGREEQYLLKPMNCPHHHLIYSQTLRSYRDL 368

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RL EFG+VYR+E SG L+GL+R RGFTQDD+H++C  +Q+ +E     +L   ++   
Sbjct: 369 PIRLTEFGTVYRHEQSGELNGLVRARGFTQDDSHIYCRPDQLVDEICNAIDLTRFVFNTL 428

Query: 419 GFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           GF+++  +LS    +      G+  +W  AE  +K   D +       I   + +GE +F
Sbjct: 429 GFDEVETRLSLHDPENQSKYGGTAEVWGQAEKDVKEAADRMG------IKYFIGIGEASF 482

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK ++I++DAIGR WQ GT+QVD+ +P RF+  Y+ S  +K  PV+IHRA FGS+ERF
Sbjct: 483 YGPKIDFIVRDAIGRKWQLGTVQVDYVMPERFDLSYIGSDGQKHRPVVIHRAPFGSMERF 542

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
           IG++IE+  GN PLWL+P+QA+V  I     +YA+E+   L    +  E D R+E I  K
Sbjct: 543 IGVLIEHTAGNFPLWLAPVQAVVLPIAEEVHDYAREVYAKLHEAGIRTELDLRSEKIGKK 602

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           IRE  + KIP +++ G  E  +  + +RR          + + I  L +E 
Sbjct: 603 IREAELSKIPAMLVIGRNEQEKGEVSLRRHRKGDEGSFGVDELIARLCEER 653


>gi|269792334|ref|YP_003317238.1| threonyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM
           6589]
 gi|269099969|gb|ACZ18956.1| threonyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM
           6589]
          Length = 631

 Score =  632 bits (1630), Expect = e-179,   Method: Composition-based stats.
 Identities = 261/633 (41%), Positives = 381/633 (60%), Gaps = 16/633 (2%)

Query: 16  NFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRH 75
                 +  +  +++  SL    VA  ++G + DL   V  G +E +       L ++RH
Sbjct: 13  ESSGPISVGEALKALGVSL-DGVVAARVDGVLVDLGANVEGGQLEPVLGSSEEGLDILRH 71

Query: 76  SCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSP 135
           S +H+MA+AV  ++P  ++ IGP I+DGFYYD       + ++L +IE++M  I+  D P
Sbjct: 72  SASHLMAQAVMRLFPGAKLGIGPSIKDGFYYDILFPSQVTDEDLPRIEEEMMRIVRDDLP 131

Query: 136 FLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVK 195
             +  +  ++A ELF S+ E +K+E++  I   + V+LYRQGE+ DLCRGPHV  TG +K
Sbjct: 132 VERLVMGRDEALELFRSRGEDFKLELISEI-QDDTVSLYRQGEFVDLCRGPHVPRTGMLK 190

Query: 196 KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDL 255
              KL+ +AGAYWRGD    ML+RIYGTA+   + L  YL  LEE+ +RDHRK+ REMDL
Sbjct: 191 -HVKLLSLAGAYWRGDEKNVMLTRIYGTAFMDGESLGAYLNRLEEARQRDHRKIGREMDL 249

Query: 256 FHIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSY 314
           F I  +G G  F+H KG  I   L+ +  R   +  Y EI TP +LD+ LW++SGHWD Y
Sbjct: 250 FSIQPEGPGFPFFHPKGMVILNELVDFWKREHKRRGYNEIRTPLILDRSLWERSGHWDHY 309

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
           R NM+       T  D R FA+KPMNCPG + VF    +SYR+LP+R++E G V+R+E S
Sbjct: 310 RDNMYF------TSIDDRPFAIKPMNCPGGILVFKSSTRSYRDLPLRMSELGVVHRHERS 363

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
           G LHGLMRVR FTQDDAH++CT +Q+ +E   + +L+  +Y         V+LSTRP+  
Sbjct: 364 GVLHGLMRVRCFTQDDAHIYCTPDQVGDEIAGVIDLMKYVYSQVFGFNYRVELSTRPDNY 423

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           +GS  LW+ AE  +K  L+          +  +  G+GAFYGPK ++ L+D+IGR WQCG
Sbjct: 424 MGSLELWNLAEEKLKQTLEATGT------DYKINPGDGAFYGPKIDFHLEDSIGRTWQCG 477

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQ 554
           TIQ+DF +P +F+  YV +      PVMIHR VFGS+ERF+GI+IE++ G  P WL+P+Q
Sbjct: 478 TIQLDFQMPEKFDVSYVGADGADHRPVMIHRTVFGSLERFLGILIEHYAGAFPFWLAPVQ 537

Query: 555 AIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
             V  +     + ++++   LKS  + +E D R+E +  KIR+  + K+P +I+ G KEA
Sbjct: 538 VRVLPVKPEFEDRSRQVEAALKSWGVRVEVDVRDEKLGKKIRDAQLSKVPYMIVIGAKEA 597

Query: 615 SERSIGIRRFGSTTTQKVSLLDAIPILTKESLP 647
               + +R         +S+      L  E  P
Sbjct: 598 ETGGVSVRHRSDGDLGTMSMDVLRDRLQGEFKP 630


>gi|222100818|ref|YP_002535386.1| Threonyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
 gi|254783544|sp|B9KAN7|SYT_THENN RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|221573208|gb|ACM24020.1| Threonyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
          Length = 640

 Score =  632 bits (1630), Expect = e-179,   Method: Composition-based stats.
 Identities = 268/647 (41%), Positives = 406/647 (62%), Gaps = 26/647 (4%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            IK+  PDGS + +       ++A  +     KK +   ++ ++ DL  P+  +  I  +
Sbjct: 2   KIKVVLPDGSEREYEKGTKPMEIAREVGI---KKVIGAVVDEELWDLKRPLERDCRIRFV 58

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWP--EVQVAIGPIIEDGFYYDFD-KEQPFSSDEL 119
           T EDP +    RH+ AHI+A+AV  ++    V++ IGP IE+GFYYDFD +    + ++L
Sbjct: 59  TLEDPEAPEFYRHTMAHILAQAVMRLYGKENVKLGIGPTIENGFYYDFDIRNGKLTEEDL 118

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IE++M++II  + P  ++ +S ++A+E+F+   + YK+E++E I   + VT+YRQGE+
Sbjct: 119 PRIEQEMKKIIKENLPIEREEISKDEAKEIFK--DQPYKLELIEEI-EGDTVTIYRQGEF 175

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPH+ STG VK F KL+ V+GAYWRG    PML+R+YGTA+  +++L  YL FLE
Sbjct: 176 VDLCRGPHLPSTGVVKHF-KLLSVSGAYWRGSEKNPMLTRVYGTAFAKKEDLENYLKFLE 234

Query: 240 ESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTP 297
           E++KRDHRKL  +++LF +  D   G+ F+  +G  +   L+++ R    +  Y+EI TP
Sbjct: 235 EAQKRDHRKLGPQLELFMLNTDYAPGMPFFLPRGVIVLNELMNFSRELHRERGYQEIFTP 294

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++++ LW+ SGHWD Y  NM+ ++      K    +A+KPMNCPGH+ V+     SYR+
Sbjct: 295 LIMNEQLWRISGHWDHYAENMYFIE------KGEERYAVKPMNCPGHILVYKSRAVSYRD 348

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R  EFG V+R E SG LHGLMRVR FTQDDAH+FCT +Q+ +E L +  LI +IY  
Sbjct: 349 LPLRFFEFGRVHRYERSGVLHGLMRVRSFTQDDAHIFCTPDQIEDEILGVLELINTIYSQ 408

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF    V+LST PE  +G +A+W+ A N +K  LD         +   V  GEGAFYGP
Sbjct: 409 FGFTY-RVELSTMPEDHMGDEAIWEKATNALKKALDRAG------LPYRVNEGEGAFYGP 461

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K ++ +KD++GR+WQC TIQ+DF +P +FN  Y+   + +   VMIHRA++GS+ERF GI
Sbjct: 462 KIDFHIKDSLGREWQCATIQLDFMMPEKFNVTYIGPDNREHTAVMIHRAIYGSLERFFGI 521

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE+F G  P W++P+Q  V  I+    E A+++A +L      +  D R ET+ Y+IR+
Sbjct: 522 LIEHFAGAFPTWIAPVQVAVIPISDKHSEGAKKVATMLSREGFRVFLDDRRETLGYRIRQ 581

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
             I+KIP +++ GD+E     + +R       + V +   I  L KE
Sbjct: 582 AQIQKIPYMVVLGDRELESGKLSVRTRSGKEIKDVEMDHFIDTLKKE 628


>gi|218563696|ref|NP_001116258.1| threonyl-tRNA synthetase, cytoplasmic isoform 1 [Danio rerio]
 gi|158253608|gb|AAI54372.1| Zgc:92586 protein [Danio rerio]
          Length = 718

 Score =  632 bits (1630), Expect = e-179,   Method: Composition-based stats.
 Identities = 251/648 (38%), Positives = 363/648 (56%), Gaps = 23/648 (3%)

Query: 2   PSDIKLTFPDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
              IK+T PDG + +      T   VA  IS+ LA   V   +N  V DL  P+  + S+
Sbjct: 75  SKPIKITLPDGKVVDGESWKTTPYQVACGISQGLADNTVISKVNNGVWDLDRPLEEDCSL 134

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDE 118
             +  +D  + AV  HS AHIM EA++ ++    +  GP IE+GFYYD   + +  SS++
Sbjct: 135 VFLKFDDEEAQAVYWHSSAHIMGEAMERVYGGC-LCYGPPIENGFYYDMYLDNEGVSSND 193

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
              +E   ++II    PF +  +  E   E+F+     +K  IL         T+YR G 
Sbjct: 194 FPCLENLCKKIIKEKQPFERLEVKKETLLEMFKY--NKFKCRILNEKVTTPTTTVYRCGP 251

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLCRGPHVR TG++K   K+ K +  YW G ++   L RIYG ++   + L ++  F 
Sbjct: 252 LIDLCRGPHVRHTGKIK-AMKIHKNSSTYWEGKADMESLQRIYGISFPDPKMLKEWEKFQ 310

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
           EE++ RDHRKL RE DLF   +   G  F+  KG  I+ TLI ++R + +   ++E+ TP
Sbjct: 311 EEAKNRDHRKLGREQDLFFFHDLSPGSCFFLPKGAYIYNTLIEFIRSEYRKRGFQEVVTP 370

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  LWQ SGHW  Y  NMF+ +       +   FALKPMNCPGH  +F+H  +S+RE
Sbjct: 371 NIYNSKLWQTSGHWQHYSENMFSFEV------EKEIFALKPMNCPGHCLMFDHRPRSWRE 424

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+RLA+FG ++RNE SG+L GL RVR F QDDAH+FC+ +Q+ +E     + + ++Y  
Sbjct: 425 LPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCSMDQIESEIKGCLDFLRTVYDV 484

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF   +  LSTRPEK +G   +WD AE  ++  L+             +  G+GAFYGP
Sbjct: 485 FGFTFKLN-LSTRPEKFLGEPEVWDQAEKQLENSLNDFGEKW------VLNPGDGAFYGP 537

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIG 536
           K +  +KDAIGR  QC TIQ+DF LP RFN  +V+    +K  PV+IHRA+ GS+ER I 
Sbjct: 538 KIDIQIKDAIGRYHQCATIQLDFQLPIRFNLTFVSHDGDDKKRPVIIHRAILGSVERMIA 597

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKI 595
           I+ EN+ G  PLWLSP Q +V  I  +  EYAQ +        L  + D     T+N KI
Sbjct: 598 ILTENYGGKWPLWLSPRQVMVVPIGPTCDEYAQRVQKEFHKVGLMTDVDLDPGCTLNKKI 657

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           R   + +   I++ G+KE S  ++ +R   +    + SL D +  L +
Sbjct: 658 RNAQLAQYNFILVVGEKEKSSDTVNVRTRDNKVHGERSLTDCMERLKQ 705


>gi|293372832|ref|ZP_06619210.1| threonine--tRNA ligase [Bacteroides ovatus SD CMC 3f]
 gi|298480838|ref|ZP_06999033.1| threonine--tRNA ligase [Bacteroides sp. D22]
 gi|292632207|gb|EFF50807.1| threonine--tRNA ligase [Bacteroides ovatus SD CMC 3f]
 gi|295085227|emb|CBK66750.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Bacteroides
           xylanisolvens XB1A]
 gi|298272861|gb|EFI14427.1| threonine--tRNA ligase [Bacteroides sp. D22]
          Length = 646

 Score =  632 bits (1629), Expect = e-179,   Method: Composition-based stats.
 Identities = 259/649 (39%), Positives = 393/649 (60%), Gaps = 19/649 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+TFPDGS++ +     G  +AESIS  LA++ +A  +NG+  DL  P+  + +  + 
Sbjct: 1   MIKITFPDGSVREYNEGVNGLQIAESISSRLAQEVLACGVNGETYDLGRPINEDANFVLY 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
             +D        H+ AH++AEA+Q ++P +Q  IGP IE+GFYYD D  E      +L  
Sbjct: 61  KWDDEEGKHAFWHTSAHLLAEALQELYPGIQFGIGPAIENGFYYDVDPGEAVIKESDLPA 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE KM E+ A+    +++ ++   A ++F  + E YK E++  +    ++T Y QG + D
Sbjct: 121 IEAKMLELAAKKEEVVRKSIAKTDALKMFGDRGETYKCELISEL-EDGHITTYTQGAFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ +T  +K   KL  VAGAYWRG  +R ML+RIYG  +  ++ L +YL  LEE+
Sbjct: 180 LCRGPHLMTTAPIK-AIKLTSVAGAYWRGHEDRKMLTRIYGITFPKKKMLDEYLVLLEEA 238

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           +KRDHRK+ +EM LF  +E    G+  W  KG  +   L  ++RR + + DY+E+ TP +
Sbjct: 239 KKRDHRKIGKEMQLFMFSETVGKGLPMWLPKGTALRLRLQEFLRRIQTRYDYQEVITPPI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            ++ L+  SGH+  Y  + F       T ++   + LKPMNCP H  ++ +  +SY++LP
Sbjct: 299 GNKLLYVTSGHYAKYGKDAFQ---PIHTPEEGEEYFLKPMNCPHHCEIYKNFPRSYKDLP 355

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AEFG+V R E SG LHGL RVR FTQDDAH+FC  EQ+ +E L++ ++I  +++   
Sbjct: 356 LRIAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPEQVKDEFLRVMDIISIVFRSMD 415

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           F+    ++S R     EK +GSD  W+ AE  +      I+  ++  +   +  GE AFY
Sbjct: 416 FQNFEAQISLRDKVNREKYIGSDDNWEKAEQAI------IEACAEKGLPAKIEYGEAAFY 469

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDAIGR WQ GTIQVD+NLP RF   Y+ S ++K  PVMIHRA FGS+ERF+
Sbjct: 470 GPKLDFMVKDAIGRRWQLGTIQVDYNLPERFELEYMGSDNQKHRPVMIHRAPFGSMERFV 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE+  G  PLWL+P Q ++  I+    EYA+++   LK H +    D RNE I  KI
Sbjct: 530 AVLIEHTAGKFPLWLTPEQVVILPISEKFNEYAEQVKMYLKIHEIRAIVDDRNEKIGRKI 589

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R++ +K+IP ++I G+KEA    + +RR G      +   +   IL +E
Sbjct: 590 RDNEMKRIPYMLIVGEKEAENGEVSVRRQGEGDKGTMKFEEFAKILNEE 638


>gi|122891384|emb|CAM13348.1| novel prtoein similar to vertebrate threonyl-tRNA synthetase (TARS,
           zgc:92586) [Danio rerio]
          Length = 718

 Score =  632 bits (1629), Expect = e-179,   Method: Composition-based stats.
 Identities = 251/648 (38%), Positives = 363/648 (56%), Gaps = 23/648 (3%)

Query: 2   PSDIKLTFPDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
              IK+T PDG + +      T   VA  IS+ LA   V   +N  V DL  P+  + S+
Sbjct: 75  SKPIKITLPDGKVVDGESWKTTPYQVACGISQGLADNTVISKVNNGVWDLDRPLEEDCSL 134

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDE 118
             +  +D  + AV  HS AHIM EA++ ++    +  GP IE+GFYYD   + +  SS++
Sbjct: 135 VFLKFDDEEAQAVYWHSSAHIMGEAMERVYGGC-LCYGPPIENGFYYDMYLDNEGVSSND 193

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
              +E   ++II    PF +  +  E   E+F+     +K  IL         T+YR G 
Sbjct: 194 FPCLENLCKKIIKEKQPFERLEVKKETLLEMFKY--NKFKCRILNEKVTTPTTTVYRCGP 251

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLCRGPHVR TG++K   K+ K +  YW G ++   L RIYG ++   + L ++  F 
Sbjct: 252 LIDLCRGPHVRHTGKIK-AMKIHKNSSTYWEGKADMESLQRIYGISFPDPKMLKEWEKFQ 310

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
           EE++ RDHRKL RE DLF   +   G  F+  KG  I+ TLI ++R + +   ++E+ TP
Sbjct: 311 EEAKNRDHRKLGREQDLFFFHDLSPGSCFFLPKGAYIYNTLIEFIRSEYRKRGFQEVVTP 370

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  LWQ SGHW  Y  NMF+ +       +   FALKPMNCPGH  +F+H  +S+RE
Sbjct: 371 NIYNSKLWQTSGHWQHYSENMFSFEV------EKEIFALKPMNCPGHCLMFDHRPRSWRE 424

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+RLA+FG ++RNE SG+L GL RVR F QDDAH+FC+ +Q+ +E     + + ++Y  
Sbjct: 425 LPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCSMDQIESEIKGCLDFLRTVYDV 484

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF   +  LSTRPEK +G   +WD AE  ++  L+             +  G+GAFYGP
Sbjct: 485 FGFTFKLN-LSTRPEKFLGEPEVWDQAEKQLENSLNDFGEKW------VLNPGDGAFYGP 537

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIG 536
           K +  +KDAIGR  QC TIQ+DF LP RFN  +V+    +K  PV+IHRA+ GS+ER I 
Sbjct: 538 KIDIQIKDAIGRYHQCATIQLDFQLPIRFNLTFVSHDGDDKKRPVIIHRAILGSVERMIA 597

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKI 595
           I+ EN+ G  PLWLSP Q +V  I  +  EYAQ +        L  + D     T+N KI
Sbjct: 598 ILTENYGGKWPLWLSPRQVMVVPIGPTCDEYAQRVQKEFHKVGLMTDVDLDPGCTLNKKI 657

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           R   + +   I++ G+KE S  ++ +R   +    + SL D +  L +
Sbjct: 658 RNAQLAQYNFILVVGEKEKSSDTVNVRTRDNKVHGERSLTDCMERLKQ 705


>gi|260170790|ref|ZP_05757202.1| threonyl-tRNA synthetase [Bacteroides sp. D2]
 gi|315919124|ref|ZP_07915364.1| threonyl-tRNA synthetase [Bacteroides sp. D2]
 gi|313692999|gb|EFS29834.1| threonyl-tRNA synthetase [Bacteroides sp. D2]
          Length = 646

 Score =  632 bits (1629), Expect = e-179,   Method: Composition-based stats.
 Identities = 259/649 (39%), Positives = 393/649 (60%), Gaps = 19/649 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+TFPDGS++ +     G  +AESIS  LA++ +A  +NG+  DL  P+  + +  + 
Sbjct: 1   MIKITFPDGSVREYNEGVNGLQIAESISSRLAQEVLACGVNGETYDLGRPINEDANFVLY 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
             +D        H+ AH++AEA+Q ++P +Q  IGP IE+GFYYD D  E      +L  
Sbjct: 61  KWDDEEGKHAFWHTSAHLLAEALQELYPGIQFGIGPAIENGFYYDVDPGEAVIKESDLPA 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE KM E+ A+    +++ ++   A ++F  + E YK E++  +    ++T Y QG + D
Sbjct: 121 IEAKMLELAAKKEDVVRKSIAKTDALKMFGDRGETYKCELISEL-EDGHITTYTQGAFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ +T  +K   KL  VAGAYWRG  +R ML+RIYG  +  ++ L +YL  LEE+
Sbjct: 180 LCRGPHLMTTAPIK-AIKLTTVAGAYWRGHEDRKMLTRIYGITFPKKKMLDEYLVLLEEA 238

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           +KRDHRK+ +EM LF  +E    G+  W  KG  +   L  ++RR + + DY+E+ TP +
Sbjct: 239 KKRDHRKIGKEMQLFMFSETVGKGLPMWLPKGTALRLRLQEFLRRIQTRYDYQEVITPPI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            ++ L+  SGH+  Y  + F       T ++   + LKPMNCP H  ++ +  +SY++LP
Sbjct: 299 GNKLLYVTSGHYAKYGKDAFQ---PIHTPEEGEEYFLKPMNCPHHCEIYKNFPRSYKDLP 355

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AEFG+V R E SG LHGL RVR FTQDDAH+FC  EQ+ +E L++ ++I  +++   
Sbjct: 356 LRIAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPEQVKDEFLRVMDIISIVFRSMD 415

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           F+    ++S R     EK +GSD  W+ AE  +      I+  ++  +   +  GE AFY
Sbjct: 416 FQNFEAQISLRDKVNREKYIGSDDNWEKAEQAI------IEACAEKGLPAKIEYGEAAFY 469

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDAIGR WQ GTIQVD+NLP RF   Y+ S ++K  PVMIHRA FGS+ERF+
Sbjct: 470 GPKLDFMVKDAIGRRWQLGTIQVDYNLPERFELEYMGSDNQKHRPVMIHRAPFGSMERFV 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE+  G  PLWL+P Q ++  I+    EYA+++   LK H +    D RNE I  KI
Sbjct: 530 AVLIEHTAGKFPLWLTPEQVVILPISEKFNEYAEQVKMYLKIHEIRAIVDDRNEKIGRKI 589

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R++ +K+IP ++I G+KEA    + +RR G      +   +   IL +E
Sbjct: 590 RDNEMKRIPYMLIVGEKEAENGEVSVRRQGEGDKGTMKFEEFAKILNEE 638


>gi|269119235|ref|YP_003307412.1| threonyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
 gi|268613113|gb|ACZ07481.1| threonyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
          Length = 634

 Score =  632 bits (1629), Expect = e-179,   Method: Composition-based stats.
 Identities = 289/645 (44%), Positives = 421/645 (65%), Gaps = 18/645 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I++  PD SI+      +  + A+SI  SL K  V   ++    D S  + +   +E+I
Sbjct: 1   MIEIILPDSSIRTLENPVSVLEFAKSIGSSLGKATVGALVDNVQVDASYILDKSAKVELI 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +  +   ++RHS AHIMA+AVQ ++P  +V IGP+IE+GF+YDFD E PF+ D+LA+I
Sbjct: 61  TIDSEKGTEILRHSAAHIMAQAVQRLFPGTKVTIGPVIENGFFYDFDPENPFTEDDLAKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M++II  +  F +  +S   A+++F   KE YK+EI++ +   E V++Y  GE+ DL
Sbjct: 121 ENEMKKIIKENYKFERTEMSAADAKKMFLDMKEDYKIEIIDDLGE-EKVSIYTIGEFKDL 179

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRG H+ STG +K F KLM  AGAYWRGDSN+ ML RIYG A++ ++EL  YL  +EE+E
Sbjct: 180 CRGTHLPSTGYLKAF-KLMSTAGAYWRGDSNKKMLQRIYGVAFSAKKELDDYLIMMEEAE 238

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD 301
           KRDHRKL ++++LF + E G G  F+  KG ++   L    RR+ K   Y+EI TP +LD
Sbjct: 239 KRDHRKLGKQLNLFFLDEHGPGFPFFMPKGMEVINKLQEIWRREHKKAGYKEIKTPVMLD 298

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW +YR NM+  +       D + +A+KPMNCPG +  + + L SY+  P++
Sbjct: 299 KELWEISGHWFNYRENMYTSEI------DEKEYAIKPMNCPGAILAYKNNLHSYKNFPLK 352

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
             E G V+R+E SG+LHGLMRVR FTQDDAHVFCT++Q+ ++ ++I NL    YK FGFE
Sbjct: 353 YGEMGLVHRHEFSGALHGLMRVRAFTQDDAHVFCTEDQIEDQIMEIINLYDRFYKLFGFE 412

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
             + +LST+P+K +GSD +WD AE  +   L  +       I+  +  G+GAFYGPK ++
Sbjct: 413 YNI-ELSTKPDKAIGSDEIWDIAERDLTNALVKMG------IDYKLNPGDGAFYGPKIDF 465

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KD+IGR WQCGTIQ+DFNLP RF+  Y+    EK  PVMIHRA++GSIERF+GI+IE+
Sbjct: 466 KMKDSIGRIWQCGTIQLDFNLPLRFHMSYIGPDGEKHQPVMIHRAMYGSIERFMGILIEH 525

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI- 600
           + G  P+WL+P+Q  + TI+    EYA ++   L++  +  E D R+E I YKIRE +  
Sbjct: 526 YAGAFPIWLAPVQVSILTISGEQAEYASDLFKKLQNIGIRTELDIRDEKIGYKIREANAE 585

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           +KIPI +I G  E +   + IRRFGS  +  +   D + ++ +ES
Sbjct: 586 QKIPIQLIIGKNEVANNEVNIRRFGSQESNTMKAEDFLKLIEEES 630


>gi|332878463|ref|ZP_08446184.1| threonine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
 gi|332683558|gb|EGJ56434.1| threonine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
          Length = 647

 Score =  632 bits (1629), Expect = e-179,   Method: Composition-based stats.
 Identities = 248/650 (38%), Positives = 388/650 (59%), Gaps = 20/650 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+TFPDGS++ +    TG  +AESIS  LA+  +A  +NG++ +L+ P+  + S+ + 
Sbjct: 1   MIKITFPDGSVREYEAGVTGLQIAESISSRLAQDVLACGVNGEIVELNRPINEDASVVLY 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE--QPFSSDELA 120
             ED        H+ AH+MAEA+Q ++P +Q  IGP IE+GFYYD            + A
Sbjct: 61  KWEDAEGKHAFWHTSAHLMAEAMQELYPGMQFGIGPAIENGFYYDVMPPAGTVIRESDFA 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEKKM E+  R  P ++  +S   A + F  + + YK E++E +    +++ Y QG + 
Sbjct: 121 GIEKKMLELAQRKEPVVRAEISKADALKFFGERGQTYKNELIEDL-EDGHISTYTQGAFT 179

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ +TG +K   K+  V+ AYWRGD  RP ++R+Y  ++  ++ L +YL  LEE
Sbjct: 180 DLCRGPHLMNTGVIK-AVKVTAVSSAYWRGDEKRPQMTRVYAISFPKKKMLDEYLTLLEE 238

Query: 241 SEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           ++KRDHRK+ +EM+LF  +   G G+  W  KG  +   L  ++++ + +  Y+++ TP 
Sbjct: 239 AKKRDHRKIGKEMELFMFSERVGKGLPMWLPKGTALRLRLEDFLKKIQKRYGYQQVMTPH 298

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +  ++L+  SGH+  Y  + F       T +    + LKPMNCP H  ++    +SY++L
Sbjct: 299 IGGKNLYVTSGHYAHYGKDSFQ---PIHTPEADEEYMLKPMNCPHHCEIYAWKPRSYKDL 355

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG+VYR E SG LHGL RVR FTQDDAH+FC  +Q+ +E +++  +I  I+   
Sbjct: 356 PLRIAEFGTVYRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKDEFIRVMEIIQIIFGAL 415

Query: 419 GFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            F+    ++S R        +GSD +W++AEN +      I+   +  +N  V  GE AF
Sbjct: 416 NFDTFEAQISLRDPNNREKYIGSDEVWEEAENAI------IEACKEKGLNAKVEYGEAAF 469

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK ++++KDA+GR WQ GTIQVD+NLP RF   Y    ++K  PVMIHRA FGS+ERF
Sbjct: 470 YGPKLDFMVKDALGRRWQLGTIQVDYNLPERFKLEYTGEDNQKHRPVMIHRAPFGSMERF 529

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             ++IE+  G+ PLWL+P Q  +  I+    +YAQ++        +    D RNE I  K
Sbjct: 530 CAVLIEHTAGHFPLWLTPDQVAILPISEKFNDYAQKLCAYFDEQDVRAIVDDRNEKIGRK 589

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IR++ +K+IP ++I G+KEA++ ++ +R+ G      +   D    + +E
Sbjct: 590 IRDNEMKRIPYMLIVGEKEAADGTVSVRKQGEGDQGSMKFEDFAKKINEE 639


>gi|329961279|ref|ZP_08299445.1| threonine--tRNA ligase [Bacteroides fluxus YIT 12057]
 gi|328531944|gb|EGF58761.1| threonine--tRNA ligase [Bacteroides fluxus YIT 12057]
          Length = 646

 Score =  632 bits (1629), Expect = e-179,   Method: Composition-based stats.
 Identities = 256/649 (39%), Positives = 395/649 (60%), Gaps = 19/649 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+TFPDGS++ +    TG  +AESIS  LA+  +A  +NG++ DL  P+ ++  + + 
Sbjct: 1   MIKITFPDGSVREYNEGVTGLQIAESISSRLAQDVLACGVNGEIYDLGRPIMQDAEVVLY 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
             ED +      H+ AH++AEA+Q ++P +Q  IGP IE+GFYYD D  E      +L  
Sbjct: 61  KWEDEQGKHAFWHTSAHLLAEALQELYPGIQFGIGPAIENGFYYDVDPGEATIKEADLPV 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEKKM E++A+    ++Q ++   A ++F  + E YK E++  +    ++T Y QG + D
Sbjct: 121 IEKKMAELVAKKEAVVRQDIAKADALKMFGDRGETYKCELISEL-EDGHITTYTQGAFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ +   +K   KL  VAGAYWRG  +R M++RIYG  +  ++ L +YL  LEE+
Sbjct: 180 LCRGPHLMTIAPIK-AIKLTSVAGAYWRGQEDRKMMTRIYGITFPKKKMLDEYLVLLEEA 238

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           +KRDHRK+ +EMDLF  ++    G+  W  KG  +   L  ++RR + + DY+E+  P +
Sbjct: 239 KKRDHRKIGKEMDLFMFSDTVGKGLPMWLPKGTALRIRLQDFLRRIQSRYDYQEVMCPPI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            ++ L+  SGH+  Y  + F       T ++   + LKPMNCP H  ++ +  +SY++LP
Sbjct: 299 GNKLLYITSGHYAKYGKDSFQ---PIHTPEEGEEYFLKPMNCPHHCMIYKNSPRSYKDLP 355

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +RLAEFG+V R E SG LHGL RVR FTQDDAH+FC  +Q+ +E L++ ++I  +++   
Sbjct: 356 LRLAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKDEFLRVMDIISIVFQSMA 415

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           FE    ++S R     +K +GSD  W+ AE  +    +      +  +   V  GE AFY
Sbjct: 416 FENFEAQISLRDKVNRDKYIGSDENWEKAEQAIIEACE------EKGLKAKVEYGEAAFY 469

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDAIGR WQ GTIQVD+NLP RF   Y  + ++K  PVMIHRA FGS+ERF+
Sbjct: 470 GPKLDFMVKDAIGRRWQLGTIQVDYNLPERFQLEYTGADNQKHRPVMIHRAPFGSMERFV 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE+  G  PLWL+P Q  +  I+    +YA E+  LLK + +    D RNE I  KI
Sbjct: 530 AVLIEHTAGKFPLWLTPDQVAILPISEKFNDYALEVKQLLKQYDIRALVDERNEKIGRKI 589

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R++ +K+IP +++ G+KEA  + I +R+ G      + + +    +++E
Sbjct: 590 RDNEMKRIPYMLVVGEKEAENKEIAVRKQGEGDQGTMKIEEFAKKVSEE 638


>gi|237716078|ref|ZP_04546559.1| threonyl-tRNA synthetase [Bacteroides sp. D1]
 gi|262407690|ref|ZP_06084238.1| threonyl-tRNA synthetase [Bacteroides sp. 2_1_22]
 gi|294643798|ref|ZP_06721596.1| threonine--tRNA ligase [Bacteroides ovatus SD CC 2a]
 gi|294808458|ref|ZP_06767211.1| threonine--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
 gi|229443725|gb|EEO49516.1| threonyl-tRNA synthetase [Bacteroides sp. D1]
 gi|262354498|gb|EEZ03590.1| threonyl-tRNA synthetase [Bacteroides sp. 2_1_22]
 gi|292640887|gb|EFF59107.1| threonine--tRNA ligase [Bacteroides ovatus SD CC 2a]
 gi|294444386|gb|EFG13100.1| threonine--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
          Length = 646

 Score =  631 bits (1628), Expect = e-179,   Method: Composition-based stats.
 Identities = 259/649 (39%), Positives = 393/649 (60%), Gaps = 19/649 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+TFPDGS++ +     G  +AESIS  LA++ +A  +NG+  DL  P+  + +  + 
Sbjct: 1   MIKITFPDGSVREYNEGVNGLQIAESISSRLAQEVLACGVNGETYDLGRPINEDANFVLY 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
             +D        H+ AH++AEA+Q ++P +Q  IGP IE+GFYYD D  E      +L  
Sbjct: 61  KWDDEEGKHAFWHTSAHLLAEALQELYPGIQFGIGPAIENGFYYDVDPGEAVIKESDLPA 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE KM E+ A+    +++ ++   A ++F  + E YK E++  +    ++T Y QG + D
Sbjct: 121 IEAKMLELAAKKEEVVRKSIAKTDALKMFGDRGETYKCELISEL-EDGHITTYTQGAFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ +T  +K   KL  VAGAYWRG  +R ML+RIYG  +  ++ L +YL  LEE+
Sbjct: 180 LCRGPHLMTTAPIK-AIKLTSVAGAYWRGHEDRKMLTRIYGITFPKKKMLDEYLILLEEA 238

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           +KRDHRK+ +EM LF  +E    G+  W  KG  +   L  ++RR + + DY+E+ TP +
Sbjct: 239 KKRDHRKIGKEMQLFMFSETVGKGLPMWLPKGTALRLRLQEFLRRIQTRYDYQEVITPPI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            ++ L+  SGH+  Y  + F       T ++   + LKPMNCP H  ++ +  +SY++LP
Sbjct: 299 GNKLLYVTSGHYAKYGKDAFQ---PIHTPEEGEEYFLKPMNCPHHCEIYKNFPRSYKDLP 355

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AEFG+V R E SG LHGL RVR FTQDDAH+FC  EQ+ +E L++ ++I  +++   
Sbjct: 356 LRIAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPEQVKDEFLRVMDIISIVFRSMD 415

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           F+    ++S R     EK +GSD  W+ AE  +      I+  ++  +   +  GE AFY
Sbjct: 416 FQNFEAQISLRDKVNREKYIGSDDNWEKAEQAI------IEACAEKGLPAKIEYGEAAFY 469

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDAIGR WQ GTIQVD+NLP RF   Y+ S ++K  PVMIHRA FGS+ERF+
Sbjct: 470 GPKLDFMVKDAIGRRWQLGTIQVDYNLPERFELEYMGSDNQKHRPVMIHRAPFGSMERFV 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE+  G  PLWL+P Q ++  I+    EYA+++   LK H +    D RNE I  KI
Sbjct: 530 AVLIEHTAGKFPLWLTPEQVVILPISEKFNEYAEQVKMYLKIHEIRAIVDDRNEKIGRKI 589

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R++ +K+IP ++I G+KEA    + +RR G      +   +   IL +E
Sbjct: 590 RDNEMKRIPYMLIVGEKEAENGEVSVRRQGEGDKGTMKFEEFAKILNEE 638


>gi|239618448|ref|YP_002941770.1| threonyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
 gi|259516548|sp|C5CI64|SYT_KOSOT RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|239507279|gb|ACR80766.1| threonyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
          Length = 648

 Score =  631 bits (1628), Expect = e-179,   Method: Composition-based stats.
 Identities = 274/645 (42%), Positives = 410/645 (63%), Gaps = 21/645 (3%)

Query: 6   KLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITP 64
           K+  PDGSIK +    T +DVA  +S +LAK+A+ V +NG++ DL+  +  E  I +I  
Sbjct: 4   KIELPDGSIKEYDHPVTAADVAADLSPALAKRAIGVEVNGELWDLTRELPEECKINLILE 63

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWP--EVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
           +DPR+    RH+ +HI+A+AV  I+   +V++ IGP+IE+GFYYDFD  +   + ++L +
Sbjct: 64  KDPRAPEFFRHTFSHILAQAVMRIYGSDKVKLGIGPVIENGFYYDFDLGDIRLTEEDLPK 123

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE++M++II  D    +  L  E+A +L + + + YKVE++E +   +  T YRQGE+ D
Sbjct: 124 IEEEMEKIIKEDLKLERFELPKEEAIKLMKDQNQPYKVELIEDL-ESDVATFYRQGEFVD 182

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ STG+VK F KL+ V+GAYWRGD    ML RIYGTA+  + EL  YL  +EE+
Sbjct: 183 LCRGPHMPSTGKVKYF-KLLSVSGAYWRGDERNKMLQRIYGTAFAKKSELEAYLKMMEEA 241

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           +KRDHRK+  ++ LF  + +   G+  +H KG  +   L+ + R    K  Y+E+ TPQ+
Sbjct: 242 KKRDHRKIGPQLGLFSFSYEYAPGMPIYHPKGTIVLNELMKFSREVHSKHGYQEVMTPQI 301

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           ++  LW +SGHWD YR NM+       T KD + +A+KPMNCPGH+ ++     SYR+LP
Sbjct: 302 MNDVLWHRSGHWDHYRDNMYF------TEKDEQQYAIKPMNCPGHILIYKSRAMSYRDLP 355

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           ++L EFG V+R E SG LHGL+RVRGF QDDAH+FCT+EQ+  +   +   +  IY  FG
Sbjct: 356 LKLFEFGKVHRYERSGVLHGLLRVRGFIQDDAHIFCTREQLKEQLKDVIRFVDMIYTPFG 415

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           FE     L TRPE  +G   +WD A   +K  +++I       +   V  G+GAFYGPK 
Sbjct: 416 FEY-RADLCTRPEDFMGDVEIWDLATEALKDAIESIG------LEYKVNEGDGAFYGPKI 468

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           ++ + D+IGR+WQC TIQ+DF +P RF   YV   +++  PVMIHRA++GS++RF GI+I
Sbjct: 469 DFHVTDSIGREWQCATIQLDFMMPERFELTYVGPDNKEYRPVMIHRAIYGSLDRFFGILI 528

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E++ G  P WL+P+Q +   I+   V+YA+E+A+ L +  + ++ D + ++ NYKIRE  
Sbjct: 529 EHYAGAFPTWLAPVQVVAIPISDKHVDYAREVADALAAEGVRVDVDEKQKSTNYKIREAQ 588

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           + KIP ++I GDKE    +I +R         + L +    L +E
Sbjct: 589 LNKIPYMLILGDKEKESETITVRLRTGKNIYGMKLAEFSAKLKEE 633


>gi|294508832|ref|YP_003572891.1| threonyl-tRNA synthetase, class IIa [Salinibacter ruber M8]
 gi|294345161|emb|CBH25939.1| threonyl-tRNA synthetase, class IIa [Salinibacter ruber M8]
          Length = 656

 Score =  631 bits (1628), Expect = e-179,   Method: Composition-based stats.
 Identities = 265/648 (40%), Positives = 391/648 (60%), Gaps = 18/648 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
           + I +T PDGS    P   TG ++AESI   LA+ A+A+ +NG+V DL  PV  +  IEI
Sbjct: 7   TSIDITLPDGSTHTHPAGTTGLEIAESIGAGLARDALAIKVNGEVRDLDRPVTEDAEIEI 66

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELA 120
           +T +D        HS AH+MAEA+Q+++P+V+  IGP I+ GFYYD D  +Q  S+DEL 
Sbjct: 67  LTWDDEEGKQTFWHSSAHLMAEALQTLYPDVKFTIGPPIDQGFYYDVDLGDQTLSADELE 126

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IE+KM E+  RD+ + +  +S   A E +E++   YK+E+      +  ++ Y QGE+ 
Sbjct: 127 AIEEKMLELARRDAAYERHEVSKADAIEHYEAEGNEYKLEL-IEGLEEGEISFYEQGEFT 185

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ STG +K   KL+ VAGAYWRGD + P L+RIYG ++  Q+ L  +L    +
Sbjct: 186 DLCRGPHIPSTGDIK-APKLLSVAGAYWRGDESNPQLTRIYGISFPKQKLLEDFLERRRK 244

Query: 241 SEKRDHRKLAREMDLFHIAEDG--SGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTP 297
           +++RDHRKL  E++LF    +    G+  W  KG  + QTL   ++  ++K  Y+ + TP
Sbjct: 245 AKERDHRKLGTELNLFTFDTEQVGPGLPMWLPKGTTLRQTLQEVLQQEQVKQGYKPVCTP 304

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKC-ADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
            +    L++ SGH+  Y  + F      +    +   + LKPMNCP HV ++ +   SYR
Sbjct: 305 HIGRLDLYRTSGHYPHYEDDQFPPMVTGEGDDGEEDGYLLKPMNCPHHVKIYQNDHHSYR 364

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +LPVRLAEFG+VYR E +G L GL RVRGFTQDDAH+FCT  Q+ +E   + +L + +  
Sbjct: 365 DLPVRLAEFGTVYRQEQTGELGGLTRVRGFTQDDAHIFCTPAQVKDEFKSVIDLTLKVLD 424

Query: 417 DFGFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
             GFE+   ++S R         G DALW  AE  ++  +      ++  ++     GE 
Sbjct: 425 ALGFEEFEAQISLRDPDDTEKYTGRDALWTRAEQDIREAV------AETDLDAYEEPGEA 478

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           AFYGPK +++++DA+GR WQ GTIQVD+NLP RF   YV+ H E+  PVMIHRA FGS+E
Sbjct: 479 AFYGPKLDFMVEDALGRAWQLGTIQVDYNLPERFELTYVDEHDERKRPVMIHRAPFGSLE 538

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
           RFIG++IE+  GN P WL+P Q  +  +    V+YAQE+A  L++  + +E D  +ET+ 
Sbjct: 539 RFIGVLIEHCGGNFPTWLAPTQVQIIPVGDDFVDYAQEVAATLRAEDVRVEIDTSDETVG 598

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
           YKIRE   +K+P +++ G  E    ++ +R         VS+ D +  
Sbjct: 599 YKIREAETQKVPYMLVVGGDEEEAGTVSVRSHADGPQGTVSVQDFLDR 646


>gi|217077729|ref|YP_002335447.1| threonyl-tRNA synthetase [Thermosipho africanus TCF52B]
 gi|217037584|gb|ACJ76106.1| threonyl-tRNA synthetase [Thermosipho africanus TCF52B]
          Length = 636

 Score =  631 bits (1628), Expect = e-178,   Method: Composition-based stats.
 Identities = 277/633 (43%), Positives = 402/633 (63%), Gaps = 21/633 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           +K+T PDGS K +    T + +A  IS  L + AV   +NG + DL  P+  +  I+IIT
Sbjct: 1   MKVTLPDGSEKEYKDKVTLAQIAREISEGLFRNAVGGIVNGMLWDLERPIDFDCEIKIIT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWP--EVQVAIGPIIEDGFYYDFD-KEQPFSSDELA 120
            +D  +    RH+ AHIMA+AV  I+    V++ IGP IE+GFYYDF+        ++L 
Sbjct: 61  KKDKEAPEFFRHTMAHIMAQAVMRIYGPENVRLGIGPTIENGFYYDFEILNGVIKEEDLE 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IEK+M++II  D    +  L+ ++A ++ + K + YKVE+++ I   E V+ Y+QGE+ 
Sbjct: 121 KIEKEMKKIIKEDLKIERFELNKDEAIKMMDEKGQIYKVELIKEI-QDEKVSFYKQGEFV 179

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+  TG +K F KL+ V+GAYWRG    PML RIYGTA+ T+ EL  YL  LEE
Sbjct: 180 DLCRGPHLPRTGMIKHF-KLLSVSGAYWRGSEKNPMLQRIYGTAFATKDELDNYLKMLEE 238

Query: 241 SEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           ++KRDHRKL  ++ LF I  D  +G+  +  KG  I   L+S+ R+   +  Y+E+ TP 
Sbjct: 239 AKKRDHRKLGPKLGLFFINTDVAAGMPIFLPKGATILNELMSFSRQLHKEYGYKEVMTPL 298

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +++  LW QSGHWD Y+ NM+       T K+   +A+KPMNCPGH+ ++ + + SYR+L
Sbjct: 299 IMNVKLWHQSGHWDHYKDNMYF------TEKEETEYAVKPMNCPGHILIYKNDVVSYRDL 352

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RL EFG V+R E SG LHGL+RVR FTQDDAH+FC ++Q+  E   +  LI  +YK F
Sbjct: 353 PIRLFEFGKVHRYERSGVLHGLLRVRAFTQDDAHIFCRQDQIEEEVSSVVRLIDELYKPF 412

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF      LST PE  +G +  W+ A N +K VL+ IK      ++  +  GEGAFYGPK
Sbjct: 413 GFTY-RATLSTMPEDHMGDEETWEKATNALKKVLEDIK------LDFDIAEGEGAFYGPK 465

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++ +KD++GR+WQC TIQ+DF +P RF+  YV+    +  PVMIH A +GS+ERF GI+
Sbjct: 466 VDFHVKDSLGREWQCATIQLDFQMPERFDLKYVDKDGIEKRPVMIHTAKYGSLERFFGIL 525

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE++ G  PLW+SP+Q +V  ++   ++YA+++A LL   ++ +E D RNET+ YKIRE 
Sbjct: 526 IEHYAGAFPLWISPVQVLVLPVSDKYIDYAKKVARLLSESNIRVEVDSRNETLGYKIREA 585

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
            I K+P +II G+ E     I +R       + 
Sbjct: 586 QISKVPYMIIVGENEEKSGKISVRSRDGVEEKD 618


>gi|270293969|ref|ZP_06200171.1| threonyl-tRNA synthetase [Bacteroides sp. D20]
 gi|270275436|gb|EFA21296.1| threonyl-tRNA synthetase [Bacteroides sp. D20]
          Length = 646

 Score =  631 bits (1627), Expect = e-178,   Method: Composition-based stats.
 Identities = 254/649 (39%), Positives = 393/649 (60%), Gaps = 19/649 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+TFPDGS++ +    TG  +AESIS  LA+  +A  +NG++ DL  P+ ++  + + 
Sbjct: 1   MIKITFPDGSVREYNEGVTGLQIAESISSRLAQDVLACGVNGEIYDLGRPIMQDAEVVLY 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
             ED +      H+ AH++AEA+Q ++P +Q  IGP IE+GFYYD D  E      +L  
Sbjct: 61  KWEDEQGKHAFWHTSAHLLAEALQELYPGIQFGIGPAIENGFYYDVDPGETTIKEADLPA 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEKKM E++A+    ++Q ++   A ++F  + E YK E++  +    ++T Y QG + D
Sbjct: 121 IEKKMAELVAKKEAVVRQDIAKADALKMFGDRGETYKCELISEL-EDGHITTYTQGAFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ +T  +K   KL  VAGAYWRG  +R M++RIYG  +  ++ L +YL  LEE+
Sbjct: 180 LCRGPHLMTTAPIK-AIKLTSVAGAYWRGQEDRKMMTRIYGITFPKKKMLDEYLVLLEEA 238

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           +KRDHRK+ +EMDLF  ++    G+  W  KG  +   L  ++RR + + DY+E+  P +
Sbjct: 239 KKRDHRKIGKEMDLFMFSDTVGKGLPMWLPKGTALRIRLQDFLRRIQARYDYQEVMCPPI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            ++ L+  SGH+  Y  + F       T ++   + LKPMNCP H  ++ +  +SY++LP
Sbjct: 299 GNKLLYITSGHYAKYGKDSFQ---PIHTPEEGEEYFLKPMNCPHHCMIYKNSPRSYKDLP 355

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +RLAEFG+V R E SG LHGL RVR FTQDDAH+FC  +Q+ +E L++ ++I  +++   
Sbjct: 356 LRLAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKDEFLRVMDIISIVFESMD 415

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           FE    ++S R     EK +GSD  W+ AE  +    +      +  +   +  GE AFY
Sbjct: 416 FENFEAQISLRDKVNREKYIGSDENWEKAERAIIEACE------EKGLKAKIEYGEAAFY 469

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDAIGR WQ GTIQVD+NLP RF   Y  + ++K  PVM+HRA FGS+ERF+
Sbjct: 470 GPKLDFMVKDAIGRRWQLGTIQVDYNLPERFQLEYTGADNQKHRPVMVHRAPFGSMERFV 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE+  G  PLWL+P Q  +  I+    +YA E+   LK + +    D RNE I  KI
Sbjct: 530 AVLIEHTAGKFPLWLTPDQVAILPISEKFNDYAHEVKQYLKRYDIRAIVDERNEKIGRKI 589

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R++ +K+IP +++ G+KEA  + + +R+ G      +   +    + +E
Sbjct: 590 RDNEMKRIPYMLVVGEKEAENKEVAVRKQGEGDKGTMKFEEFAKKMNEE 638


>gi|160889627|ref|ZP_02070630.1| hypothetical protein BACUNI_02053 [Bacteroides uniformis ATCC 8492]
 gi|317479178|ref|ZP_07938315.1| threonyl-tRNA synthetase [Bacteroides sp. 4_1_36]
 gi|156860619|gb|EDO54050.1| hypothetical protein BACUNI_02053 [Bacteroides uniformis ATCC 8492]
 gi|316904666|gb|EFV26483.1| threonyl-tRNA synthetase [Bacteroides sp. 4_1_36]
          Length = 646

 Score =  631 bits (1627), Expect = e-178,   Method: Composition-based stats.
 Identities = 253/649 (38%), Positives = 392/649 (60%), Gaps = 19/649 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+TFPDGS++ +    TG  +AESIS  LA+  +A  +NG++ DL  P+ ++  + + 
Sbjct: 1   MIKITFPDGSVREYNEGVTGLQIAESISSRLAQDVLACGVNGEIYDLGRPIMQDAEVVLY 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
             ED +      H+ AH++AEA+Q ++P +   IGP IE+GFYYD D  E      +L  
Sbjct: 61  KWEDEQGKHAFWHTSAHLLAEALQELYPGILFGIGPAIENGFYYDVDPGETTIKEADLPA 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEKKM E++A+    ++Q ++   A ++F  + E YK E++  +    ++T Y QG + D
Sbjct: 121 IEKKMAELVAKKEAVVRQDIAKADALKMFGDRGETYKCELISEL-EDGHITTYTQGAFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ +T  +K   KL  VAGAYWRG  +R M++RIYG  +  ++ L +YL  LEE+
Sbjct: 180 LCRGPHLMTTAPIK-AIKLTSVAGAYWRGQEDRKMMTRIYGITFPKKKMLDEYLVLLEEA 238

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           +KRDHRK+ +EMDLF  ++    G+  W  KG  +   L  ++RR + + DY+E+  P +
Sbjct: 239 KKRDHRKIGKEMDLFMFSDTVGKGLPMWLPKGTALRIRLQDFLRRIQARYDYQEVMCPPI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            ++ L+  SGH+  Y  + F       T ++   + LKPMNCP H  ++ +  +SY++LP
Sbjct: 299 GNKLLYITSGHYAKYGKDSFQ---PIHTPEEGEEYFLKPMNCPHHCMIYKNSPRSYKDLP 355

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +RLAEFG+V R E SG LHGL RVR FTQDDAH+FC  +Q+ +E L++ ++I  +++   
Sbjct: 356 LRLAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKDEFLRVMDIISIVFESMD 415

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           FE    ++S R     EK +GSD  W+ AE  +    +      +  +   +  GE AFY
Sbjct: 416 FENFEAQISLRDKVNREKYIGSDENWEKAERAIIEACE------EKGLKAKIEYGEAAFY 469

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDAIGR WQ GTIQVD+NLP RF   Y  + ++K  PVM+HRA FGS+ERF+
Sbjct: 470 GPKLDFMVKDAIGRRWQLGTIQVDYNLPERFQLEYTGADNQKHRPVMVHRAPFGSMERFV 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE+  G  PLWL+P Q  +  I+    +YA E+   LK + +    D RNE I  KI
Sbjct: 530 AVLIEHTAGKFPLWLTPDQVAILPISEKFNDYAHEVKQYLKRYDIRAIVDERNEKIGRKI 589

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R++ +K+IP +++ G+KEA  + + +R+ G      +   +    + +E
Sbjct: 590 RDNEMKRIPYMLVVGEKEAENKEVAVRKQGEGDKGTMKFEEFAKKMNEE 638


>gi|145219006|ref|YP_001129715.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase
           [Prosthecochloris vibrioformis DSM 265]
 gi|189083618|sp|A4SCK4|SYT_PROVI RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|145205170|gb|ABP36213.1| Ser-tRNA(Thr) hydrolase [Chlorobium phaeovibrioides DSM 265]
          Length = 666

 Score =  631 bits (1627), Expect = e-178,   Method: Composition-based stats.
 Identities = 261/649 (40%), Positives = 393/649 (60%), Gaps = 16/649 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           + +T PDG+ K  P  +TG D+A  I R LA++AVA+ I+GK  DLS P+  + + EIIT
Sbjct: 11  LTVTLPDGTTKPLPAGSTGMDIALEIGRRLAREAVAIKIDGKAVDLSAPLTADCTAEIIT 70

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            + P    +  HS +HIMA A++ ++P  +   GP IE GFYYD   E  F+ ++L  IE
Sbjct: 71  FDSPEGKEIFWHSASHIMAHAIEELFPGSKFGAGPAIEQGFYYDIASEHRFTEEDLRAIE 130

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKE-AYKVEILES-IPAKENVTLYRQGEWFD 181
           ++M  I  RD P +++ +   +A E F + +E  YKVEIL   +   E V+LY +G + D
Sbjct: 131 ERMLLIAGRDIPIVREEMPRIQAIEYFRTVREDPYKVEILTDTLKETETVSLYHEGGFTD 190

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LC GPH+ ST  +K   KL  ++ +YWRGD +R  + RIYG A+ T++ L  +L  LEE+
Sbjct: 191 LCSGPHLFSTAALK-AVKLFNISASYWRGDQSRESMQRIYGIAFPTEKLLKAHLSALEEA 249

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQV 299
           +KRDHRKL  E++LF ++ + GSG+  W  KG  I Q L S+++ + +   Y  + TP +
Sbjct: 250 KKRDHRKLGTELELFMLSPEIGSGLPVWLPKGAIIRQELESFLKEEQRRRGYLPVYTPHI 309

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +  L+++SGH+  Y  + F      D       + LKPMNCP H  +++  ++SYR+LP
Sbjct: 310 GNIDLYKRSGHYPYYSDSQFPPLTYHDEEGKAEQYLLKPMNCPHHHLIYSSKMRSYRDLP 369

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           VRLAEFG+VYR+E SG L+GL+R RGFTQDD+H++C  +Q+ +E     +L   ++   G
Sbjct: 370 VRLAEFGTVYRHEQSGELNGLVRARGFTQDDSHIYCRPDQLVDEICNAIDLTRYVFATLG 429

Query: 420 FEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           F ++  +LS        K  G+  +W+ AE  ++   D +K      IN  + +GE +FY
Sbjct: 430 FTEVETRLSMHDPLNPSKYGGTADVWEQAEKDVREAADRMK------INYFIGVGEASFY 483

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++I++DA+GR WQ GT+QVD+ +P RF+  YV S  +K  P++IHRA FGS+ERFI
Sbjct: 484 GPKIDFIVRDALGRKWQLGTVQVDYVMPERFDLSYVGSDGQKHRPIVIHRAPFGSMERFI 543

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
           G++IE+  GN PLWL+P+QA+V  I     +Y  E+ + +    + +E D RNE I  KI
Sbjct: 544 GVLIEHTAGNFPLWLAPVQAVVLPIAEDVHDYGSEVRDAMHRAGIRVELDVRNEKIGRKI 603

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           RE  + KIP ++I G KE    S+ +RR         S+ +    L  E
Sbjct: 604 REAELAKIPFMVIVGQKEKEGGSVSLRRHRIGDEGAFSIQEMTEKLLNE 652


>gi|303237224|ref|ZP_07323794.1| threonine--tRNA ligase [Prevotella disiens FB035-09AN]
 gi|302482611|gb|EFL45636.1| threonine--tRNA ligase [Prevotella disiens FB035-09AN]
          Length = 649

 Score =  631 bits (1627), Expect = e-178,   Method: Composition-based stats.
 Identities = 249/650 (38%), Positives = 388/650 (59%), Gaps = 19/650 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            +K+TFPDGSI+ +    TG  +AESIS +LA+  V+  +NG   +L+ P+  + +I + 
Sbjct: 1   MVKITFPDGSIREYEQGITGLQIAESISPALARNVVSCGVNGVTTELNRPINEDATIALY 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD--FDKEQPFSSDELA 120
             +D        HS AH++AEA++ ++P +Q   GP IE+GF+YD      Q  S ++  
Sbjct: 61  KFDDEEGKHTFWHSSAHLLAEALKELYPGIQFGFGPAIENGFFYDVQTADGQAISENDFP 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IE KM E+  +DSP +++ +S   A + F +  + YKVE +        ++ Y QG + 
Sbjct: 121 KIEAKMLELAKKDSPIVRRDVSKADAVKEFTADGQEYKVEHIVEDLEDGTISTYSQGNFT 180

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ STG +K   KL  VAGA+WRGD+N   L+RIYG  +  ++ L +YL  LEE
Sbjct: 181 DLCRGPHLTSTGAIK-AVKLTSVAGAFWRGDANSNQLTRIYGITFPKKKMLDEYLVMLEE 239

Query: 241 SEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           ++KRDHRK+ ++M+LF  +   G G+  W  KG ++   L   +R+ +    Y+E+ TP 
Sbjct: 240 AKKRDHRKIGKDMELFMFSERVGKGLPIWLPKGTQVRLRLQEVLRKLQRPYHYQEVITPG 299

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +  ++L+  SGH+  Y  + F       T ++   + LKPMNCP H  +F H  +SY++L
Sbjct: 300 IGGKNLYVTSGHYAHYGKDAFQ---PIQTPEEGEEYMLKPMNCPHHCEIFAHKPRSYKDL 356

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG+V+R E SG LHGL RVR FTQDDAH+F   EQ+  E   + ++I  ++  F
Sbjct: 357 PLRIAEFGTVFRYEKSGELHGLTRVRTFTQDDAHLFVRPEQVKKEFEDVIDIIQKVFITF 416

Query: 419 GFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           GFE    ++S R        +GSD +W+++E  +K   +      +  +   V +GE AF
Sbjct: 417 GFENYEAQISLRDPDDKEKYIGSDEIWEESERAIKEACE------EKGLKARVEIGEAAF 470

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK ++++KDAIGR WQ GTIQVD+NLP+RF   Y    + K  PVMIHRA FGS+ERF
Sbjct: 471 YGPKLDFMVKDAIGRRWQLGTIQVDYNLPNRFKLEYTAEDNTKQTPVMIHRAPFGSLERF 530

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             ++IE+  G+ PLWL+P Q  +  I+     YA+E+    +++ +    D RNE I  K
Sbjct: 531 TAVLIEHTAGHFPLWLTPDQVAILPISEKYNGYAEEVRAYFEANEVRAIVDDRNEKIGRK 590

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IR++ +K++P ++I G++E ++  + +R+ G      +   D +  +  E
Sbjct: 591 IRDNELKRVPYMVIVGEQEMADGLVSMRQQGGGEQATMPKEDFVKRIQNE 640


>gi|157115843|ref|XP_001658309.1| threonyl-tRNA synthetase [Aedes aegypti]
 gi|108883479|gb|EAT47704.1| threonyl-tRNA synthetase [Aedes aegypti]
          Length = 716

 Score =  631 bits (1626), Expect = e-178,   Method: Composition-based stats.
 Identities = 243/646 (37%), Positives = 371/646 (57%), Gaps = 22/646 (3%)

Query: 3   SDIKLTFPDGS-IKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIE 60
           + IK+T PDG  +      +T  DVA+ IS+ LA   V   +N ++ DL  P+  +  ++
Sbjct: 76  NPIKVTLPDGKEVDATSWESTPYDVAKGISQGLADNTVIARVNNELWDLDRPLEGDCKLQ 135

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQP-FSSDEL 119
           ++  +DP + AV  HS AHI+ EA++  +    +  GP IE+GFYYD   E    S+ + 
Sbjct: 136 LLKFDDPDAQAVFWHSSAHILGEAMEKRYGGH-LCYGPPIENGFYYDMFLEGSGISNQDY 194

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             +E ++++I+    PF +  +      ++FE     +K+ IL      +  T+YR G  
Sbjct: 195 GALESEVKKIVKDKQPFERLEMKKSDLLKMFEY--NEFKLRILNEKVTTDTTTVYRCGPL 252

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHVR TG+VK   K++K +  YW G ++   L RIYG ++   ++L ++    E
Sbjct: 253 IDLCRGPHVRHTGKVK-ALKVVKNSSTYWEGKADAETLQRIYGISFPEPKQLKEWEKIQE 311

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+ KRDHRKL +E +LF   E   G  F+  KG  I+ TL++++R + +   ++E+ TP 
Sbjct: 312 EAAKRDHRKLGKEQELFFFHELSPGSCFFQPKGAHIYNTLMNFIRDEYRKRGFQEVITPN 371

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           + +  LWQ SGHW  Y  NMF+ +       +  TFALKPMNCPGH  +F+H  +S+REL
Sbjct: 372 IYNAKLWQTSGHWQHYAENMFSFE------SEKETFALKPMNCPGHCLMFDHRNRSWREL 425

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+A+FG ++RNE SG+L GL RVR F QDDAH+FC  +Q+  E +   + +  +Y  F
Sbjct: 426 PLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCMPDQIKQEIIGCLDFLAHVYGVF 485

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF   +V LSTRPEK +G   +W++AE  +   LD      ++        G+GAFYGPK
Sbjct: 486 GFTFNLV-LSTRPEKYLGDIEVWNEAEKALAESLDKFGQPWKE------NPGDGAFYGPK 538

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +  + DA+ R+ QC TIQ+DF LP RFN  Y++   EK  PV+IHRAV GS+ER I I+
Sbjct: 539 IDITIMDALKRNHQCATIQLDFQLPIRFNLNYIDDSGEKKRPVIIHRAVLGSVERMIAIL 598

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIRE 597
            E++ G  P WLSP Q +V  +     +YA ++   L       E D    +T+N KIR 
Sbjct: 599 TESYAGKWPFWLSPRQVMVVPVGPQYDDYADKVRQRLHEAGFMAEADLDAGDTMNKKIRN 658

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             + +   I++ G+KE S  ++ +R   +    +VS+ D +  L +
Sbjct: 659 AQLAQFNFILVVGEKERSSETVNVRTRDNKVHGEVSVDDLVAKLRR 704


>gi|190571398|ref|YP_001975756.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|213018797|ref|ZP_03334605.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|238055114|sp|B3CMJ4|SYT_WOLPP RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|190357670|emb|CAQ55114.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|212995748|gb|EEB56388.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
          Length = 633

 Score =  631 bits (1626), Expect = e-178,   Method: Composition-based stats.
 Identities = 315/643 (48%), Positives = 440/643 (68%), Gaps = 18/643 (2%)

Query: 4   DIKLTF-PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
            IK+TF  +  +K +    TG D+ +       ++A+A  +NG++ DLS  +  +  IE+
Sbjct: 1   MIKVTFLAEQKVKEYSGRVTGFDILQ---PDALREAIAFKVNGELYDLSREIESDTEIEV 57

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           I   D   L +IRH  AHIMA+AV+ ++P  Q+ IGP I+DGFYYDF  ++ F++D+LA 
Sbjct: 58  IQLSDEAGLDIIRHDAAHIMAQAVKELFPNTQITIGPTIQDGFYYDFATDRTFTTDDLAA 117

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEKKM+EII  +  F+++  + ++A + F    E YKV+I+ SIP  EN+T+Y+QG + D
Sbjct: 118 IEKKMKEIIKSNHRFVREVWTRKQAIDFFSDIGERYKVDIVSSIPENENLTVYKQGNFVD 177

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH  STG+VK F KLMKVAGAYWRGDS  PML RIYGTAW  + EL  YL  LEE+
Sbjct: 178 LCRGPHSPSTGRVKAF-KLMKVAGAYWRGDSKGPMLQRIYGTAWRNKDELNTYLKRLEEA 236

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVL 300
           EKRDHRK+A++MDLFHI E+  G IFWH +G+ ++  L SY+R+K + + Y E+ TP ++
Sbjct: 237 EKRDHRKIAKDMDLFHIQEEAVGQIFWHEQGYTLYNVLESYIRKKLMNNGYFEVKTPILV 296

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            + LW++SGHWD +R NMF +        + +  A+KPMNCP HV +FN  ++SYR+LP+
Sbjct: 297 SKELWEKSGHWDKFRENMFII-----DESESKKLAIKPMNCPCHVQIFNSHIRSYRDLPI 351

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AEFG+ +RNE SGSLHGLMRVRGFTQDDAH+FC ++Q+ +E +K  +L+  +Y + GF
Sbjct: 352 RMAEFGTCHRNESSGSLHGLMRVRGFTQDDAHIFCMEKQVNSETVKFCDLLKEVYSELGF 411

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
            +I VK S RP+ R G+D +WD AE  +   +          ++  +  GEGAFYGPK E
Sbjct: 412 NEISVKFSDRPDTRSGNDEVWDRAERALLEAVKEAG------LSYELNPGEGAFYGPKLE 465

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           +ILKDAIGR+WQCGT+QVDF LP R  AFY+ +   K HPVM+HRA+ G+ ERFIGI+IE
Sbjct: 466 FILKDAIGRNWQCGTLQVDFILPERLGAFYIGTDGHKHHPVMLHRAILGTFERFIGILIE 525

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           N+ G  P+WL+P Q  + TIT+ +  YA EI+N+LK   + I+TD  NE I+YKIR HS 
Sbjct: 526 NYAGKFPVWLAPTQLAILTITNESDGYATEISNVLKEQGVRIKTDLTNEKISYKIRLHSS 585

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            K+PI+ I G  E + +++ +R  GS   +  SL +A  +L K
Sbjct: 586 SKVPILWIIGKNEVTNKTVSVRNLGSEKQESFSLENATELLLK 628


>gi|260911583|ref|ZP_05918168.1| threonine-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295]
 gi|260634289|gb|EEX52394.1| threonine-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295]
          Length = 654

 Score =  631 bits (1626), Expect = e-178,   Method: Composition-based stats.
 Identities = 255/650 (39%), Positives = 395/650 (60%), Gaps = 19/650 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+TFPDGSI+ +    TG ++A+SIS +LA+  +++ +NGK  +L+ P+  + +I + 
Sbjct: 1   MIKITFPDGSIREYEKGITGLEIAKSISPALARDVLSIGVNGKTTELNRPINEDATIALY 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ--PFSSDELA 120
             ED        HS AH++AEA+Q+++P +Q   GP +E+GF+YD   +   P S ++  
Sbjct: 61  KWEDEEGKHTFWHSSAHLLAEALQALYPGIQFGFGPAVENGFFYDVMTKDGTPISENDFP 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IE+KM+E   RD   +++ +S   A + F++  + YK E ++       ++ Y QG + 
Sbjct: 121 KIEEKMREFAKRDEAIVRREVSKADALKEFKADGQEYKCEHIDLDLEDGTISTYSQGAFT 180

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ +TG +K   KL  VAGA+WRGD+ +  L+RIYG  +  ++ L +YL  LEE
Sbjct: 181 DLCRGPHLMTTGPIK-AIKLTSVAGAFWRGDAEKDQLTRIYGITFPKKKMLDEYLVMLEE 239

Query: 241 SEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++KRDHRK+ +EM+LF  +   G G+  W  KG ++   L   +R+  K   Y+E+ TP 
Sbjct: 240 AKKRDHRKIGKEMELFMFSERVGKGLPIWLPKGTELRLRLQDMLRKIQKRFGYQEVITPH 299

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +  ++L+  SGH+  Y  + F       T ++   + LKPMNCP H  VF    +SY++L
Sbjct: 300 IGSKNLYVTSGHYAHYGKDSFQ---PIHTPEEDEEYMLKPMNCPHHCEVFAWKPRSYKDL 356

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG+VYR E SG LHGL RVR FTQDDAH+FC  EQ+ NE L++ ++I +++K F
Sbjct: 357 PLRIAEFGTVYRYEKSGELHGLTRVRSFTQDDAHIFCRPEQVKNEFLRVMDIIQAVFKIF 416

Query: 419 GFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            F+    ++S R        +GSD +W+++E  +      I    +  ++  +  GE AF
Sbjct: 417 QFDNFEAQISLRDPNNTTKYIGSDEVWEESEQAI------IDACKEKGLDAKIAYGEAAF 470

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK ++++KDAIGR WQ GTIQVD+NLP RF   Y    + K  PVM+HRA FGS+ERF
Sbjct: 471 YGPKLDFMVKDAIGRRWQLGTIQVDYNLPERFKLEYTAEDNTKKTPVMVHRAPFGSMERF 530

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             ++IE+  G+ PLWL P Q  +  I+    +YAQ +A  L S  +    D RNE I  K
Sbjct: 531 SAVLIEHTTGHFPLWLIPDQVAILPISEKFNDYAQRVAKYLDSVGVRATLDVRNEKIGRK 590

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IR++ IK++P ++I G+KEA E  + +R+ G      +++ +    +  E
Sbjct: 591 IRDNEIKRVPYMVIVGEKEAEEGLVSMRKQGGGEQATMTMEEFAKRINDE 640


>gi|52078698|ref|YP_077489.1| threonyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52784060|ref|YP_089889.1| threonyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52001909|gb|AAU21851.1| threonyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52346562|gb|AAU39196.1| ThrZ [Bacillus licheniformis ATCC 14580]
          Length = 639

 Score =  630 bits (1625), Expect = e-178,   Method: Composition-based stats.
 Identities = 274/647 (42%), Positives = 421/647 (65%), Gaps = 17/647 (2%)

Query: 1   MP-SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGS 58
           M  S IK+ F +G+ K FP   T   +AESIS +L K AV   ++ K  DLS  + ++  
Sbjct: 1   MSESLIKVQFKEGNTKEFPKGITIKRIAESISTTLRKHAVVAKVDEKFVDLSYTLDKDVK 60

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           ++I T +    L+V+RH+  HI+A AV+ ++  V + IGP+IED F+YD   E   S ++
Sbjct: 61  LDIFTLDSKEGLSVLRHTSTHILAHAVKRLYSSVSLGIGPVIEDEFFYDLKLEHSLSPED 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L  IE++M++II  +    +  +S+E+A +LFE   E  K+EIL  IP  + +TLY+QGE
Sbjct: 121 LLAIEREMEKIIKENIEIKRIVVSYEEAEKLFEENNEPLKLEILRGIPKGQEITLYQQGE 180

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + DLCRGPH+ STG +K F KL +V+GAYWRG+  + +L R+YG A+  + +L +YLYFL
Sbjct: 181 FIDLCRGPHLPSTGFIKAF-KLTRVSGAYWRGNRQKEVLQRVYGVAFKKKDDLNEYLYFL 239

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTP 297
           E++ K DHR+L +++DLF  +E+  G+ F+  KG  + + L    R  +    Y+E++TP
Sbjct: 240 EQAAKHDHRQLGKQLDLFMFSEEAPGMPFYLPKGQIVRKELEKLSRELQNNASYDEVHTP 299

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +++  LW++SGHWD Y+ NM+  +       D   FA+KPMNCPGH+ +F + L SYR+
Sbjct: 300 FMMNYRLWEKSGHWDHYQENMYFSEV------DNTKFAIKPMNCPGHMLIFKNNLYSYRD 353

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+RLAE+G V+R+E SGSL+GL+RVR F QDDAH+F  ++Q+ +E  K+ +LI  +Y+ 
Sbjct: 354 LPIRLAEYGQVHRHEFSGSLNGLLRVRTFCQDDAHIFVREDQIESEIKKVFHLIDQVYRT 413

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
            GFE   V+LSTRP+  +G++ LW+ +E  +K VLD +       I   V  G+GAFYGP
Sbjct: 414 IGFEYS-VELSTRPDDSLGNNHLWEVSEGSLKNVLDDL------AIKYQVNEGDGAFYGP 466

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K ++ +KDA+ R  QCGTIQ+DF +P +F+  Y+N ++EK  PV+IHRA+FGSI+RF GI
Sbjct: 467 KIDFHIKDALKRSHQCGTIQLDFQMPEKFDLTYINHNNEKVRPVVIHRAIFGSIDRFFGI 526

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE+F G  P+WL+PIQ  +  I+   +EY   I + LK H + ++ +  N+ + YKIRE
Sbjct: 527 LIEHFAGVFPVWLAPIQVQIIPISHIHLEYCLGIKSELKQHGIRVQINESNQKLGYKIRE 586

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
             ++KIP  ++ GD E  E  + +R++G    + VS+      + ++
Sbjct: 587 AQVQKIPYTLVVGDNEIKENGVNVRKYGEEQQKNVSIESFKKNILQQ 633


>gi|156552955|ref|XP_001603180.1| PREDICTED: similar to threonyl-tRNA synthetase [Nasonia
           vitripennis]
          Length = 859

 Score =  630 bits (1625), Expect = e-178,   Method: Composition-based stats.
 Identities = 248/661 (37%), Positives = 375/661 (56%), Gaps = 29/661 (4%)

Query: 2   PSDIKLTFPDGSIKNFP---VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EG 57
            ++I +T PDG  K  P      T  +VA+ IS+ LA   V   +N ++ DL  P+  + 
Sbjct: 216 STEITVTLPDG--KEVPAQSWRTTPYEVAKGISQGLADNTVIAKVNNELWDLDRPLEKDC 273

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK--EQPFS 115
            ++++  +DP + AV  HS AHI+ EA++ ++    +  GP IE+GFYYD     ++  S
Sbjct: 274 KLQLLKFDDPEAQAVFWHSSAHILGEALERVYGGC-LCYGPPIENGFYYDMFMGQDKGIS 332

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            ++   +E   + I+     F +  +  E   E+F+     +KV IL+        T+YR
Sbjct: 333 QEDFPYLESLFKNIVKDKQSFERLEMKKEDLLEMFKY--NEFKVRILKEKVQTPTTTVYR 390

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
            G   DLCRGPHVR+TG++K   K+ K + AYW G++N   L R+YG ++   ++L ++ 
Sbjct: 391 CGPLIDLCRGPHVRNTGKIKAA-KITKSSSAYWEGNANAETLQRVYGISFPDSKQLKEWE 449

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEI 294
            F EE+ KRDHRK+ +E +LF   E   G  F+  +G  I+ TL+ ++R + K   ++E+
Sbjct: 450 KFQEEAAKRDHRKIGKEQELFFFHELSPGSCFFQPRGAHIYNTLVEFIRGEYKKRGFQEV 509

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
            TP + +  LWQ SGHW  Y  NMF+         +  TFALKPMNCPGH  +F+   +S
Sbjct: 510 VTPNIYNSKLWQTSGHWQHYSENMFSFDV------EKETFALKPMNCPGHCMIFDVRNRS 563

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           +RELP+R+A+FG ++RNE SG+L GL RVR F QDDAH+FCT EQ+ +E L   + +  +
Sbjct: 564 WRELPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCTSEQIKDEMLGALDFLDHV 623

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           Y  FGF   +  LSTRPEK +G  A+WD AE  +   LD             +  G+GAF
Sbjct: 624 YSVFGFTFNLC-LSTRPEKFLGEVAVWDAAEKALSESLDAFGKPW------TLNPGDGAF 676

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  + DA+ R  QC TIQ+DF LP RFN  YVN   EK  PV+IHRA+ GS+ER 
Sbjct: 677 YGPKIDITIMDALKRAHQCATIQLDFQLPIRFNLNYVNETGEKTRPVIIHRAILGSVERM 736

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FRNETINY 593
           I I+ E++ G  P WLSP Q +V  +  S  EYA +  + + +     E D    +T+N 
Sbjct: 737 IAILTESYAGKWPFWLSPRQVMVIPVGPSLDEYATQTRDKIHAAGFMTEVDTDHGDTLNK 796

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT--KESLPPDCQ 651
           KIR   + +   I++ G+KE +  ++ +R   +    ++ + D I      KE+   +C+
Sbjct: 797 KIRNAQLDQFNFILVVGEKEKAAGTVNVRTRDNKVHGEIGVDDLIQKFQTFKETKARNCE 856

Query: 652 K 652
           +
Sbjct: 857 E 857


>gi|88657649|ref|YP_506841.1| threonyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas]
 gi|123750088|sp|Q2GI92|SYT_EHRCR RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|88599106|gb|ABD44575.1| threonyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas]
          Length = 633

 Score =  630 bits (1624), Expect = e-178,   Method: Composition-based stats.
 Identities = 306/640 (47%), Positives = 426/640 (66%), Gaps = 15/640 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I + F +   K F     G D+   +   L  + +A  +NG++ DLS  +    + E+I
Sbjct: 1   MINIHFSNNLCKQFHRGIKGHDIVNDLFPKLKNETIAAKVNGELYDLSREIIENCTFEVI 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T      L +IRH  AHIMA+AV+ ++P+VQ+ IGP I+DGFYYDF     FSSD+L  I
Sbjct: 61  TINSEEGLEIIRHDTAHIMAQAVKEMFPDVQITIGPTIKDGFYYDFATNHNFSSDDLEII 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EKKM EII ++  F+++  S E+A + F S  E YKV+I+ +IP+ EN+T+Y+QG + DL
Sbjct: 121 EKKMIEIINKNESFIREVWSREEAIKFFSSIGEDYKVKIISNIPSNENITVYKQGSFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH  ST +  + FKL KV+G+YW+G+SN   L RIYGTAW  ++EL  YL  L E+E
Sbjct: 181 CRGPHAPST-KTSRAFKLTKVSGSYWQGNSNNERLQRIYGTAWRNEEELKLYLNNLIEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLD 301
           KRDHRK+ RE++LFHI  +  G IFWH KGW I++ + +Y+R+K+  + Y E+ TP +L+
Sbjct: 240 KRDHRKIGRELELFHIQNEACGQIFWHTKGWTIYRIIENYIRKKLENNGYIEVKTPILLN 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW++SGHWD +R NMF  +  D T       A+KPMNCP H+ +FN  ++SYR+LP+R
Sbjct: 300 KELWEKSGHWDKFRENMFLSEAEDKT------LAIKPMNCPCHIQIFNSKIRSYRDLPIR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AEFG+ +R E SG+LHGLMRVRGFTQDDAH+FCT+ Q+ +E LK  NL+I IYKDFGF 
Sbjct: 354 MAEFGTCHRYEASGALHGLMRVRGFTQDDAHIFCTESQITSEALKFCNLLIEIYKDFGFT 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            I+VK S RP+ R GSD +WD AE  +K  ++         ++  +  G+GAFYGPK E+
Sbjct: 414 DILVKFSDRPKNRAGSDEIWDKAEAALKKSVEVAN------LSYVLNPGDGAFYGPKLEF 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            LKDAIGR+WQCGT+Q+DF LP R  A+Y+ S  +K HPVM+HRA+ G+ ERFIGI+IE+
Sbjct: 468 TLKDAIGREWQCGTLQMDFVLPERLGAYYIGSDGKKHHPVMLHRAILGTFERFIGILIEH 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G  P+WL+PIQ  + TI+  ++ YA  +    + H++ +E D  NE INYKIR H  K
Sbjct: 528 HSGKFPMWLAPIQLSILTISEDSINYANSLKIKAEEHNIRVELDTTNEKINYKIRNHIHK 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           K+P+  I G KE  E S+ IR   S     + +  A+  L
Sbjct: 588 KVPVFWIVGKKEVEENSVSIRYLESNKQHVMPIDKALKTL 627


>gi|227501051|ref|ZP_03931100.1| threonine--tRNA ligase [Anaerococcus tetradius ATCC 35098]
 gi|227216824|gb|EEI82222.1| threonine--tRNA ligase [Anaerococcus tetradius ATCC 35098]
          Length = 667

 Score =  630 bits (1624), Expect = e-178,   Method: Composition-based stats.
 Identities = 267/645 (41%), Positives = 394/645 (61%), Gaps = 17/645 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEII 62
            IK+  PDGS+K +       DV + IS  L + A+   +NGKV   ++P+ E S   ++
Sbjct: 28  MIKIKLPDGSVKEYESGVLVGDVTKDISMGLYRAALGAVVNGKVMGYAEPIEEDSDFRVV 87

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
             ED     +  H+ +H+MA A+  ++P  + AIGP I DGFYYD D E  F+ ++L +I
Sbjct: 88  KFEDKEGKEIFWHTSSHLMAAAINELYPNTKFAIGPAINDGFYYDMDLEHRFTPEDLEKI 147

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE-WFD 181
           EKKM E+  +D    +  +S  +A E+F+  K+ YKVE++E +P  E +TLY+ G+ + D
Sbjct: 148 EKKMLELAKKDLKLERVEISRNEALEMFKKDKQDYKVELIEDLPEDEKITLYKMGDVFVD 207

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ ST +V K  KL  +AGAYWRGDS+R ML RIYG ++   ++L +Y    +E 
Sbjct: 208 LCRGPHLEST-KVIKAVKLKTIAGAYWRGDSDRQMLQRIYGISFEKAKQLEEYEELQKEI 266

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
           EKRDHRK+ REM+LF   E+G G  F+H  G  +   L+ +    + +  Y EI TP +L
Sbjct: 267 EKRDHRKIGREMNLFAFHEEGPGFPFFHPNGMILMNELLVWWTDVLNNNGYGEIKTPLIL 326

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ LW +SGHWD Y+ NM+  K       D   +A+KPMNCPG V  +     SYR+LP+
Sbjct: 327 NEALWHRSGHWDHYKENMYFTKI------DGEAYAVKPMNCPGSVLTYAANQHSYRDLPI 380

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLAE+G V+R+E SG+LHGL RVR FTQDDAHV+C   Q+  E  K+ +L   +Y  FGF
Sbjct: 381 RLAEYGQVHRHELSGTLHGLFRVRTFTQDDAHVYCMPSQIKEEVYKMIDLADLLYSTFGF 440

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           +  + +LSTRP+  +G    WD AE+ +K  L+      +  I   +  G+GAFYGPK +
Sbjct: 441 KYTI-ELSTRPDDFMGEIKDWDFAEDQLKKALE------ERGIEYEINPGDGAFYGPKID 493

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           + L DA  R+WQCGTIQ+DF LP  F+  Y++ + EK  P M+HRA+ GSIERFIG++ E
Sbjct: 494 FHLLDAAKREWQCGTIQLDFQLPQNFDLTYIDENGEKKRPAMLHRALLGSIERFIGVLTE 553

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +F G  PLWL+P Q  +  ++   + YA+E+   +K     +  D+R+E + YKIR+  +
Sbjct: 554 HFAGRFPLWLNPQQVEIIPVSDKYIPYAEELKEKIKKAGYRVNIDYRSEGVGYKIRQAQL 613

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
            +   +++ G+KE +   + +R   +  T  VSL + I  L +E 
Sbjct: 614 MRTNYMLVVGEKEENSGKLTVRNRDAKETPDVSLEEFIEKLNEEK 658


>gi|319649026|ref|ZP_08003235.1| ThrZ protein [Bacillus sp. BT1B_CT2]
 gi|317389020|gb|EFV69838.1| ThrZ protein [Bacillus sp. BT1B_CT2]
          Length = 639

 Score =  630 bits (1624), Expect = e-178,   Method: Composition-based stats.
 Identities = 273/647 (42%), Positives = 420/647 (64%), Gaps = 17/647 (2%)

Query: 1   MP-SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGS 58
           M  S IK+ F +G+ K FP   T   +AESIS +L K AV   ++ K  DLS  + ++  
Sbjct: 1   MSESLIKVQFKEGNTKEFPKGITIKRIAESISTTLRKHAVVAKVDEKFVDLSYTLDKDVK 60

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           ++I T +    L+V+RH+  HI+A AV+ ++  V + IGP+IED F+YD   E   S ++
Sbjct: 61  LDIFTLDSKEGLSVLRHTSTHILAHAVKRLYSSVSLGIGPVIEDEFFYDLKLEHSLSPED 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L  IE++M++II  +    +  +S+E+A +LFE   E  K+EIL  IP  + +TLY+QGE
Sbjct: 121 LLAIEREMEKIIKENIEIKRIVVSYEEAEKLFEENNEPLKLEILRGIPKGQEITLYQQGE 180

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + DLCRGPH+ STG +K F KL +V+GAYWRG+  + +L R+YG A+  + +L +YLYFL
Sbjct: 181 FIDLCRGPHLPSTGFIKAF-KLTRVSGAYWRGNRQKEVLQRVYGVAFKKKDDLNEYLYFL 239

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTP 297
           E++ K DHR+L +++DLF  +E+  G+ F+  KG  + + L    R  +    Y+E++TP
Sbjct: 240 EQAAKHDHRQLGKQLDLFMFSEEAPGMPFYLPKGQIVRKELEKLSRELQNNASYDEVHTP 299

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +++  LW++SGHWD Y+ NM+  +       D   FA+KPMNCPGH+ +F + L SYR+
Sbjct: 300 FMMNYRLWEKSGHWDHYQENMYFSEV------DNTKFAIKPMNCPGHMLIFKNNLYSYRD 353

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+RLAE+G V+R+E SGSL+GL+RVR F QDDAH+F  ++Q+ +E  K+ +LI  +Y+ 
Sbjct: 354 LPIRLAEYGQVHRHEFSGSLNGLLRVRTFCQDDAHIFVREDQIESEIKKVFHLIDQVYRT 413

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
            GFE   V+LSTRP+  +G++ LW+ +E  +K VLD +       I   V  G+GAFYGP
Sbjct: 414 IGFEYS-VELSTRPDDSLGNNHLWEVSEGSLKNVLDDL------AIKYQVNEGDGAFYGP 466

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K ++ +KDA+ R  QCGTIQ+DF +P +F+  Y+N ++EK  PV+IHRA+FGSI+RF GI
Sbjct: 467 KIDFHIKDALKRSHQCGTIQLDFQMPEKFDLTYINHNNEKVRPVVIHRAIFGSIDRFFGI 526

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE+F G  P+WL+PIQ  +  I+   +EY   I + LK   + ++ +  N+ + YKIRE
Sbjct: 527 LIEHFAGAFPVWLAPIQVQIIPISHIHLEYCLGIKSELKQLGIRVQINESNQKLGYKIRE 586

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
             ++KIP  ++ GD E  E  + +R++G    + VS+      + ++
Sbjct: 587 AQVQKIPYTLVVGDNEIKENGVNVRKYGEEQQKNVSIESFKKNILQQ 633


>gi|189183871|ref|YP_001937656.1| threonyl-tRNA synthetase [Orientia tsutsugamushi str. Ikeda]
 gi|238692247|sp|B3CSS5|SYT_ORITI RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|189180642|dbj|BAG40422.1| threonyl-tRNA synthetase [Orientia tsutsugamushi str. Ikeda]
          Length = 648

 Score =  630 bits (1624), Expect = e-178,   Method: Composition-based stats.
 Identities = 307/651 (47%), Positives = 440/651 (67%), Gaps = 17/651 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +  PDGS+K + +  TG ++ +S+S SL KK +AVA+N ++ DL  P+    +++ I
Sbjct: 1   MIDIILPDGSVKQYKIGVTGQEIIQSLSISLFKKTIAVAVNNELMDLYIPIINTATVKAI 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +  + + ++RH  AHI+A+AV+ ++P+ QV IGP+I+DGFYYDF +++PF+S +L  I
Sbjct: 61  TIDSVQGIEILRHDTAHILAQAVKKLFPDTQVVIGPVIKDGFYYDFARDKPFTSKDLEII 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E++MQ+II ++    ++     KA E F+ +KE YKV+++E IP  E +++YRQG + DL
Sbjct: 121 EQEMQDIITKNDLIQREVWLRAKAIEFFKQQKEFYKVKLIEEIPESEEISIYRQGNFVDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH  STG   K+FKL KV+GAYWRG+S    L RIYGTAW  + +L  YL+ L E++
Sbjct: 181 CRGPHSPSTGYCAKYFKLTKVSGAYWRGNSKNESLQRIYGTAWGKKSDLDSYLHRLSEAQ 240

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL RE++LFH  ++  G+ FWH KGW IF+ +  Y+  +I+   Y E+NTP VL+
Sbjct: 241 KRDHRKLGRELELFHFQDEAQGMPFWHSKGWTIFKIIKDYISCQIQRAGYIEVNTPMVLN 300

Query: 302 QHLWQQSGHWDSYRANMFAVKC---------ADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           Q LW++SGHW+ +R NMF +             D+I+     ALKPMNCPGH+ +FN+ +
Sbjct: 301 QKLWEKSGHWEKFRENMFTLDTNAAEQDHNLIKDSIETKCALALKPMNCPGHIQIFNYTI 360

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
           KSYR+LP+R+AEFGS +R EPSG+L+GLMRVR F QDDAH+FCT++Q+ +E +K  +L+ 
Sbjct: 361 KSYRDLPLRMAEFGSCHRYEPSGALYGLMRVRSFVQDDAHIFCTEDQITDETIKFCHLLK 420

Query: 413 SIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
            +Y+DFGF ++ +K S RPEKR G+D +WD AE  +   + T+           +  GEG
Sbjct: 421 QVYQDFGFPEVKIKFSDRPEKRAGTDKIWDKAEQALIHAIQTLGE------EYTINRGEG 474

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           AFYGPK E+IL DAIGR+WQCGT+QVDF LP R NA Y++S   K  PV++HRA+ GS E
Sbjct: 475 AFYGPKLEFILTDAIGREWQCGTLQVDFVLPERLNASYISSEGSKKRPVILHRAILGSFE 534

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
           RFIGI+IE++ G LP+WL+PIQ  V +IT  AV YA+++   L  +++    D  N+ IN
Sbjct: 535 RFIGILIEHYSGKLPIWLAPIQVAVVSITDEAVNYAKQLHQELIDNNIRSTLDISNQKIN 594

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           YKIR     K+P+I I G KE+    I IR  GS     +S  + I  + K
Sbjct: 595 YKIRNFFTAKVPLIAILGKKESESGKIAIRTLGSQEQHVISSSELIAHIRK 645


>gi|148284343|ref|YP_001248433.1| threonyl-tRNA synthetase [Orientia tsutsugamushi str. Boryong]
 gi|166225471|sp|A5CD12|SYT_ORITB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|146739782|emb|CAM79649.1| threonyl-tRNA synthetase [Orientia tsutsugamushi str. Boryong]
          Length = 648

 Score =  630 bits (1624), Expect = e-178,   Method: Composition-based stats.
 Identities = 308/651 (47%), Positives = 442/651 (67%), Gaps = 17/651 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +  PDGS+K + +  TG ++ +S+S SL KK +AV IN ++ DL  P+    +++ I
Sbjct: 1   MIDIILPDGSVKQYKIGVTGQEIIQSLSISLFKKTIAVEINNELIDLYIPIINTATVKAI 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +  + + ++RH  AHI+A+AV+ ++P+ QV IGP+I+DGFYYDF +++PF++ +L  I
Sbjct: 61  TIDSVQGIEILRHDTAHILAQAVKKLFPDTQVVIGPVIKDGFYYDFARDKPFTNKDLEVI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E++MQ+IIA++    ++     KA E F+ +KE YKV+++E IP  E +++YRQG + DL
Sbjct: 121 EQEMQDIIAKNDLIQREVWLRAKAIEFFKQQKEFYKVKLIEEIPESEEISIYRQGNFVDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH  STG   K+FKL KV+GAYWRG+S   +L RIYGTAW  + +L  YL+ L E++
Sbjct: 181 CRGPHSPSTGYCTKYFKLTKVSGAYWRGNSKNEVLQRIYGTAWEKKSDLDSYLHRLSEAQ 240

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL RE++LFH  ++  G+ FWH KGW IF+ + +Y+  +I+   Y E+NTP VL 
Sbjct: 241 KRDHRKLGRELELFHFQDEAQGMPFWHDKGWTIFKIIKNYISCQIQRAGYIEVNTPMVLS 300

Query: 302 QHLWQQSGHWDSYRANMFAVKC---------ADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           Q LW++SGHW+ +R NMF +             D+I+     ALKPMNCPGH+ +FN+ +
Sbjct: 301 QKLWEKSGHWEKFRENMFTLDTNVAEKDHNLIKDSIETKCALALKPMNCPGHIQIFNYTI 360

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
           KSYR+LP+R+AEFGS +R EPSG+L+GLMRVR F QDDAH+FCT++Q+ +E +K  +L+ 
Sbjct: 361 KSYRDLPLRMAEFGSCHRYEPSGALYGLMRVRSFVQDDAHIFCTEDQITDETIKFCHLLK 420

Query: 413 SIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
            +Y+DFGF ++ +K S RPEKR G+D +WD AE  +   + T+           +  GEG
Sbjct: 421 QVYQDFGFPEVKIKFSDRPEKRAGTDKIWDKAEQALIHAIQTLGE------EYTINRGEG 474

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           AFYGPK E+IL DAIGR+WQCGT+QVDF LP R NA Y++S   K  PV++HRA+ GS E
Sbjct: 475 AFYGPKLEFILTDAIGREWQCGTLQVDFVLPERLNASYISSEGSKKRPVILHRAILGSFE 534

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
           RFIGI+IE++ G LP+WL+PIQ  V +IT  AV YA+++   L  +++    D  N+ IN
Sbjct: 535 RFIGILIEHYSGRLPIWLAPIQVAVVSITDEAVNYAKQLHQELIDNNIRSTLDISNQKIN 594

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           YKIR     K+P+I I G KE+    I IR  GS   Q +S  + I  + K
Sbjct: 595 YKIRNFFTAKVPLIAILGKKESESGKIAIRTLGSQEQQVISSSELIAHIRK 645


>gi|282858709|ref|ZP_06267863.1| threonine--tRNA ligase [Prevotella bivia JCVIHMP010]
 gi|282588513|gb|EFB93664.1| threonine--tRNA ligase [Prevotella bivia JCVIHMP010]
          Length = 649

 Score =  629 bits (1623), Expect = e-178,   Method: Composition-based stats.
 Identities = 251/650 (38%), Positives = 392/650 (60%), Gaps = 19/650 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            +K+TFPDGS++ +    TG  +AESIS +LA+  V+  +NG   +L+ P+  + +I + 
Sbjct: 1   MVKITFPDGSVREYEQGVTGYQIAESISPALARNVVSCGVNGVTTELNRPINEDATIALY 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD--FDKEQPFSSDELA 120
             ED        HS AH++AEA++ ++P +Q   GP IE+GF+YD       P S ++  
Sbjct: 61  RFEDEEGKHSFWHSSAHLLAEALKELYPGIQFGFGPAIENGFFYDVQTADGTPISENDFP 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IE KM E+  +DSP +++ +   +A + F +  + YKVE ++       ++ Y QG + 
Sbjct: 121 KIEAKMLELAKKDSPIIRREVPKAEAIKEFTADGQTYKVEHIDQDLEDGTISTYSQGNFT 180

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ STG +K   KL  VAGA+WRGD+    L+RIYG  +  ++ L +YL  LEE
Sbjct: 181 DLCRGPHLVSTGIIK-AVKLTSVAGAFWRGDAKNDQLTRIYGITFPKKKMLDEYLVMLEE 239

Query: 241 SEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++KRDHRK+ +EM+LF  +   G G+  W  KG ++   L   +R+ +   +Y+E+ TP 
Sbjct: 240 AKKRDHRKIGKEMELFMFSDRVGKGLPIWLPKGTQLRLRLQDLLRKLLKPYNYQEVITPG 299

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +  ++L+  SGH+  Y  + F       T ++   + LKPMNCP H  ++ H  +SY++L
Sbjct: 300 IGSKNLYVTSGHYAHYGKDAFQ---PIQTPEEDEEYMLKPMNCPHHCEIYAHKPRSYKDL 356

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG+VYR E SG LHGL RVR FTQDDAH+F   +Q+  E     ++I+ ++K F
Sbjct: 357 PLRIAEFGTVYRYEKSGELHGLTRVRNFTQDDAHIFVRPDQVKAEFENNIDIILKVFKTF 416

Query: 419 GFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           GFE    ++S R  +     +G D +W+++E  +K         ++  +   V LGE AF
Sbjct: 417 GFENYEAQISLRDPEDKEKYIGEDDVWNESEQAIKEA------CAEKGLKATVELGEAAF 470

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK ++++KDAIGR WQ GTIQVD+NLP RF+  Y    + K  PVM+HRA FGS+ERF
Sbjct: 471 YGPKLDFMVKDAIGRRWQLGTIQVDYNLPQRFHLEYTAEDNTKKTPVMVHRAPFGSMERF 530

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             ++IE+  G+ PLWL+P Q  +  I+    +YA+E+   L +  +    D RNE I  K
Sbjct: 531 TAVLIEHTAGHFPLWLTPDQVAILPISEKYNDYAREVMQKLDTAGVRALIDDRNEKIGRK 590

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IR++ +K+IP +++ G+KEA+E  + +R+ G      +++   I  +  E
Sbjct: 591 IRDNELKRIPYMVVVGEKEAAEGLVAMRKQGGGEQSTMTIQQFIDRVNAE 640


>gi|29345832|ref|NP_809335.1| threonyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
 gi|73919769|sp|Q8AAP2|SYT_BACTN RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|29337725|gb|AAO75529.1| threonyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
          Length = 646

 Score =  629 bits (1623), Expect = e-178,   Method: Composition-based stats.
 Identities = 258/649 (39%), Positives = 388/649 (59%), Gaps = 19/649 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+TFPDGS++ +     G  +AESIS  LA+  +A  +NG+  DL  P+  +    + 
Sbjct: 1   MIKITFPDGSVREYNEGVNGLQIAESISSRLAQDVLACGVNGETYDLGRPINEDADFVLY 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
             +D        H+ AH++AEA+Q ++P +Q  IGP IE+GFYYD D  E      +L  
Sbjct: 61  KWDDEEGKHAFWHTSAHLLAEALQELYPGIQFGIGPAIENGFYYDVDPGEAVIKESDLPA 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE KM E+ A+    +++ +S   A ++F  + E YK E++  +    ++T Y QG + D
Sbjct: 121 IEAKMLELSAKKDAVVRESISKTDALKMFGDRGETYKCELISEL-EDGHITTYTQGAFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ +T  +K   KL  VAGAYWRG  +R ML+RIYG  +  ++ L +YL  LEE+
Sbjct: 180 LCRGPHLMTTAPIK-AIKLTTVAGAYWRGHEDRKMLTRIYGITFPKKKMLDEYLVLLEEA 238

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           +KRDHRK+ +EM LF  +E    G+  W  KG  +   L  ++RR + + DY+E+ TP +
Sbjct: 239 KKRDHRKIGKEMQLFMFSETVGKGLPMWLPKGTALRLRLQEFLRRIQTRYDYQEVITPPI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            ++ L+  SGH+  Y  + F       T ++   + LKPMNCP H  ++ +  +SY++LP
Sbjct: 299 GNKLLYVTSGHYAKYGKDAFQ---PIHTPEEGEEYFLKPMNCPHHCEIYKNFPRSYKDLP 355

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AEFG+V R E SG LHGL RVR FTQDDAH+FC  +Q+ +E L++ ++I  +++   
Sbjct: 356 LRIAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKDEFLRVMDIISIVFRSMN 415

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           F+    ++S R     EK +GSD  W+ AE  +    +      +  +   +  GE AFY
Sbjct: 416 FQNFEAQISLRDKVNREKYIGSDDNWEKAEQAIIEACE------EKGLPAKIEYGEAAFY 469

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDAIGR WQ GTIQVD+NLP RF   Y+ S ++K  PVMIHRA FGS+ERF+
Sbjct: 470 GPKLDFMVKDAIGRRWQLGTIQVDYNLPERFELEYMGSDNQKHRPVMIHRAPFGSMERFV 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE+  G  PLWL+P Q  +  I+    EYA+++   LK H +    D RNE I  KI
Sbjct: 530 AVLIEHTAGKFPLWLTPDQVAILPISEKFNEYAEQVKMYLKMHEIRAIVDDRNEKIGRKI 589

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R++ +K+IP ++I G+KEA    + +RR G      +   +   IL +E
Sbjct: 590 RDNEMKRIPYMLIVGEKEAENGEVSVRRQGEGDKGTMKYEEFAKILNEE 638


>gi|47575750|ref|NP_001001219.1| threonyl-tRNA synthetase [Xenopus (Silurana) tropicalis]
 gi|301626626|ref|XP_002942489.1| PREDICTED: threonyl-tRNA synthetase, cytoplasmic-like [Xenopus
           (Silurana) tropicalis]
 gi|45709710|gb|AAH67949.1| threonyl-tRNA synthetase-like 2 [Xenopus (Silurana) tropicalis]
          Length = 721

 Score =  629 bits (1623), Expect = e-178,   Method: Composition-based stats.
 Identities = 245/648 (37%), Positives = 364/648 (56%), Gaps = 23/648 (3%)

Query: 2   PSDIKLTFPDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
              IK+T PDG   +     +T   +A  IS+ LA   V   +NG V DL  P+  + ++
Sbjct: 78  SKAIKVTLPDGKQVDAESWKSTPYQIACGISQGLADNTVVAKVNGSVWDLDRPLEEDCTL 137

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQP-FSSDE 118
            ++  +D  + AV  HS AHIM EA++ ++    +  GP IE+GFYYD   E    SS++
Sbjct: 138 ALLKFDDEEAQAVYWHSSAHIMGEAMERVYGGC-LCYGPPIENGFYYDMYLEDGGVSSND 196

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
              +E   ++I+     F +  ++ E   E+F+     +K  IL         T+YR G 
Sbjct: 197 FTSLENLCKKIMKEKQQFERLEVTKETLLEMFKY--NKFKCRILNEKVDTPTTTVYRCGP 254

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLCRGPHVR TG++K   K+ K +  YW G ++   L R+YG ++   + L ++  F 
Sbjct: 255 LIDLCRGPHVRHTGKIK-ALKVHKNSSTYWEGKADMETLQRVYGISFPDPKMLKEWEKFQ 313

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
           EE++ RDHRK+ RE +LF   E   G  F+  KG  I+  LI+++R++ +   ++E+ TP
Sbjct: 314 EEAKNRDHRKIGREQELFFFHELSPGSCFFLPKGAYIYNQLIAFIRQEYRKRGFQEVVTP 373

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            V +  LWQ SGHW  Y  NMF+ +       +   FALKPMNCPGH  +F+H  +S+RE
Sbjct: 374 NVYNSKLWQTSGHWQHYSENMFSFEV------EKEIFALKPMNCPGHCLMFDHRPRSWRE 427

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+A+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+  E     + + ++Y  
Sbjct: 428 LPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEEEIKSCLDFLRAVYNV 487

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF   +  LSTRPEK +G   +W+ AE  ++  L+             +  G+GAFYGP
Sbjct: 488 FGFTFKLN-LSTRPEKFLGDIEVWNQAEKQLENSLNEFGEKW------VLNPGDGAFYGP 540

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIG 536
           K +  +KDAIGR  QC TIQ+DF LP RFN  YV+    +K  PV+IHRA+ GS+ER I 
Sbjct: 541 KIDIQIKDAIGRYHQCATIQLDFQLPIRFNLTYVSHDGDDKKRPVIIHRAILGSVERMIA 600

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKI 595
           I+ ENF G  PLWLSP Q +V  +  +  EYAQ++        L  + D     T+N KI
Sbjct: 601 ILTENFGGKWPLWLSPQQVMVVPVGPTCDEYAQQVREQFHRAGLMTDVDLDPGCTLNKKI 660

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           R   + +   I++ G+KE +  ++ IR   +    + ++ + I  L +
Sbjct: 661 RNAQLAQYNFILVIGEKEKASGTVNIRTRDNKVHGERTIAETIERLLQ 708


>gi|255692010|ref|ZP_05415685.1| threonine--tRNA ligase [Bacteroides finegoldii DSM 17565]
 gi|260622256|gb|EEX45127.1| threonine--tRNA ligase [Bacteroides finegoldii DSM 17565]
          Length = 646

 Score =  629 bits (1623), Expect = e-178,   Method: Composition-based stats.
 Identities = 257/649 (39%), Positives = 389/649 (59%), Gaps = 19/649 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+ FPDGS++ +     G  +AESIS  LA+  +A  +NG+  DL  P+  +    + 
Sbjct: 1   MIKIKFPDGSVREYNEGVNGLQIAESISSRLAQDVLACGVNGETYDLGRPINEDADFVLY 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
             +D        H+ AH++AEA+Q ++P +Q  IGP IE+GFYYD D  E      +L  
Sbjct: 61  KWDDEEGKHAFWHTSAHLLAEALQELYPGIQFGIGPAIENGFYYDVDPGEAVIKESDLPA 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE KMQE+ A+    +++ ++   A ++F  + E YK E++  +    ++T Y QG + D
Sbjct: 121 IEAKMQELAAKKEDVVRESIAKADALKMFGDRGETYKCELISEL-EDGHITTYTQGAFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ +T  +K   KL  VAGAYWRG  +R ML+RIYG  +  ++ L +YL  LEE+
Sbjct: 180 LCRGPHLMTTAPIK-AIKLTTVAGAYWRGQEDRKMLTRIYGITFPKKKMLDEYLVLLEEA 238

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           +KRDHRK+ +EM LF  +E    G+  W  KG  +   L  ++RR + + DY+E+ TP +
Sbjct: 239 KKRDHRKIGKEMQLFMFSETVGKGLPMWLPKGTALRLRLQEFLRRIQTRYDYQEVITPPI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            ++ L+  SGH+  Y  + F       T ++   + LKPMNCP H  ++ +  +SY++LP
Sbjct: 299 GNKLLYVTSGHYAKYGKDAFQ---PIHTPEEGEEYFLKPMNCPHHCEIYKNFPRSYKDLP 355

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AEFG+V R E SG LHGL RVR FTQDDAH+FC  +Q+ +E L++ ++I  +++   
Sbjct: 356 LRIAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKDEFLRVMDIISIVFRSMN 415

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           F+    ++S R     EK +GSD  W+ AE  +    +      +  +   +  GE AFY
Sbjct: 416 FQNFEAQISLRDKVNREKYIGSDDNWEKAEQAIIEACE------EKGLPAKIEYGEAAFY 469

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDAIGR WQ GTIQVD+NLP RF   Y+ S ++K  PVMIHRA FGS+ERF+
Sbjct: 470 GPKLDFMVKDAIGRRWQLGTIQVDYNLPERFELEYMGSDNQKHRPVMIHRAPFGSMERFV 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE+  G  PLWL+P Q  +  I+    EYA+++   LK+H +    D RNE I  KI
Sbjct: 530 AVLIEHTAGKFPLWLTPDQVAILPISEKFNEYAEQVKMYLKTHEIRAIVDDRNEKIGRKI 589

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R++ +K+IP ++I G+KEA    + +RR G      +   +   IL +E
Sbjct: 590 RDNEMKRIPYMLIVGEKEAENGEVSVRRQGEGDKGTMKFEEFAKILNEE 638


>gi|308272327|emb|CBX28933.1| Threonyl-tRNA synthetase [uncultured Desulfobacterium sp.]
          Length = 637

 Score =  629 bits (1622), Expect = e-178,   Method: Composition-based stats.
 Identities = 266/640 (41%), Positives = 410/640 (64%), Gaps = 20/640 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEII 62
            +++T PDGSIKNF    +G D+A+SIS  LA+  VA+ ++G + DL   + + S + ++
Sbjct: 1   MVRITLPDGSIKNFENALSGLDIAKSISEGLARNCVAMELDGNLVDLDTIISDDSKVRLV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T  D ++L ++RHS AH+MA+A+  I+ + ++ IGP++EDGFYYD D E P S ++  +I
Sbjct: 61  TASDEKALEILRHSAAHVMAQAILHIYKDAKLTIGPVVEDGFYYDIDME-PVSREDFGKI 119

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E ++++II+   PF ++ +S E+A + ++   E YK+EI+  +     ++LY QG++ DL
Sbjct: 120 EAEIKKIISAKIPFKRKLVSKEEALKFYK--DEPYKLEIISEL-EDGTISLYEQGDFTDL 176

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+  TG +K   K+ KV+GAYWR D  +  L RIYGTA+ T++EL  YL+F+EE++
Sbjct: 177 CRGPHLPHTGFIK-AIKMTKVSGAYWRADQKKAQLQRIYGTAFYTKKELDDYLHFIEEAK 235

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLD 301
           KR+HRK+   +DLF   ++  G+ F+H KG  +++ LISY +       Y E  TP +L+
Sbjct: 236 KRNHRKIGMVLDLFSFHDEAPGMPFFHPKGMSVWEALISYWKIEHRAAGYVETKTPIMLN 295

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW++SGHW++YR NM+       ++ D   +A+KPMNCPG + +F     SY++LP+R
Sbjct: 296 RSLWERSGHWENYRENMYT------SVVDETEYAIKPMNCPGGMLLFGMKPHSYKDLPLR 349

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
            AE G V+R+E SG L GL RVR F QDDAH+F T EQ+ +E L +  L+  IY  FG  
Sbjct: 350 SAEIGLVHRHELSGVLSGLFRVRAFHQDDAHIFMTPEQIESEILGVLKLVERIYSTFGLS 409

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
             + +LSTRPEK +G+D  W  A   ++  L T        ++     G+GAFYGPK + 
Sbjct: 410 FHL-ELSTRPEKSIGNDEQWAVATKGLESALKT------YGVDYKTNEGDGAFYGPKIDI 462

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+GR WQCGT+Q+D  LP RF+  Y++ ++EKC P+MIHR ++GSIERF GI+IE+
Sbjct: 463 HIKDALGRTWQCGTVQLDMALPERFDLSYIDKNNEKCRPIMIHRVIYGSIERFFGILIEH 522

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           F G  PLW++P+QA +  I    + YA  I ++L+   +  E D R E++  KIR+  + 
Sbjct: 523 FAGKFPLWMAPVQAALLPINDELIPYAAGIRDVLEKEGIRTELDSRTESLKKKIRDAQLS 582

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            +P+II CG KE    ++ +R         V++ D + I+
Sbjct: 583 YVPLIITCGPKEMESGTVSVRNLSGKIKYGVTIEDFVKIV 622


>gi|296327515|ref|ZP_06870061.1| threonine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
 gi|296155341|gb|EFG96112.1| threonine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
          Length = 637

 Score =  629 bits (1621), Expect = e-178,   Method: Composition-based stats.
 Identities = 286/640 (44%), Positives = 406/640 (63%), Gaps = 17/640 (2%)

Query: 11  DGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRS 69
           +G  K +  +    ++A+ IS SLAKK+V   ++GK  D+S  +  +  +E I  + P  
Sbjct: 6   NGENKEYNNNINMFEIAKGISNSLAKKSVGAKVDGKNVDMSYILDHDAEVEFIDIDSPEG 65

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
             ++RHS AH+MA+AV  ++P+ +V IGP+IE+GFYYDFD  + F+ ++L +IE +M+ I
Sbjct: 66  EDIVRHSTAHLMAQAVLRLYPDTKVTIGPVIENGFYYDFDPVEQFTEEDLEKIEAEMKRI 125

Query: 130 IARDSPFLKQYLSHEKARELFES-KKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           +  +    K  L  ++A E F    K  YKVE++E IP  E V+ Y+QG++ DLCRG HV
Sbjct: 126 VKENIKLEKYVLPRDEAIEYFRDVDKNKYKVEVVEGIPQGEQVSFYKQGDFTDLCRGTHV 185

Query: 189 RSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRK 248
            STG +K F KL  VAGAYWRG+S   ML RIYG +++ ++ L  +L  +EE+EKRDHRK
Sbjct: 186 PSTGYLKAF-KLRTVAGAYWRGNSKNKMLQRIYGYSFSNEERLKHHLKLMEEAEKRDHRK 244

Query: 249 LAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQ 307
           L +E++LF ++E G G  F+  KG  +   LI   RR+ +   Y+++ TP +L++ LW+ 
Sbjct: 245 LGKELELFFLSEYGPGFPFFLPKGMIVRNVLIDLWRREHEKAGYQQLETPIMLNKELWEI 304

Query: 308 SGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGS 367
           SGHW +YR NM+  +       D   FA+KPMNCPG V  F H L SY++LP RLAE G 
Sbjct: 305 SGHWFNYRENMYTSEI------DELEFAIKPMNCPGGVLAFKHQLHSYKDLPARLAELGR 358

Query: 368 VYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKL 427
           V+R+E SG+LHGLMRVR FTQDD+H+F T +Q+ +E + + NLI   Y      +  ++L
Sbjct: 359 VHRHEFSGALHGLMRVRSFTQDDSHIFMTPDQVQDEIIGVVNLIDKFYSKLFGFEYEIEL 418

Query: 428 STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAI 487
           ST+PEK +GS  +WD AE  + G LD +           +  G+GAFYGPK ++ +KDAI
Sbjct: 419 STKPEKAIGSQEIWDMAEAALAGALDKLGR------KYKINPGDGAFYGPKLDFKIKDAI 472

Query: 488 GRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           GR WQCGTIQ+DFNLP RF+  Y+    EK  PVM+HR ++GSIERFIGI+IE++ G  P
Sbjct: 473 GRMWQCGTIQLDFNLPERFDVTYIGEDGEKHRPVMLHRVIYGSIERFIGILIEHYAGAFP 532

Query: 548 LWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH-SIKKIPII 606
           +WL+P+Q  V T+    + YA+EI N L+   +  E D RNETI YKIRE     KIP+ 
Sbjct: 533 MWLAPVQVKVLTLNDECIPYAKEIMNKLEELGIRAELDDRNETIGYKIREANGKYKIPMQ 592

Query: 607 IICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           +I G  E   + + IRRFGS      SL +    +  E+ 
Sbjct: 593 LIIGKNEVENKEVNIRRFGSKDQFSKSLDEFYTYVVDEAT 632


>gi|78186013|ref|YP_374056.1| threonyl-tRNA synthetase, class IIA [Chlorobium luteolum DSM 273]
 gi|78165915|gb|ABB23013.1| Ser-tRNA(Thr) hydrolase [Chlorobium luteolum DSM 273]
          Length = 677

 Score =  629 bits (1621), Expect = e-178,   Method: Composition-based stats.
 Identities = 257/650 (39%), Positives = 398/650 (61%), Gaps = 16/650 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            + +T PDG+IK FP  +TG D+A SI R LA  A+AV I+GK  DLS P+  + ++ II
Sbjct: 30  MLSITLPDGTIKLFPKGSTGLDIALSIGRRLADAALAVMIDGKAADLSMPIGMDCTLSII 89

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +      V  HS +HIMA AV+ ++P  +   GP +E GFYYD      F+ D+L  I
Sbjct: 90  TFDSAEGHEVFWHSASHIMASAVEELFPGARFGAGPAVEQGFYYDIASSHRFNEDDLRSI 149

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFE-SKKEAYKVEILES-IPAKENVTLYRQGEWF 180
           EKKM EI  RD+P +++ ++ E A E F+  +++ YKVEILE  +     V+LY +G + 
Sbjct: 150 EKKMLEIAGRDTPIVREEMTREAAIEFFKTVRRDPYKVEILEDTLKNVPTVSLYHEGGFT 209

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLC GPH+ ST ++K       ++ ++WRGDS+R  + RIYG A+ +++ L ++L  LEE
Sbjct: 210 DLCTGPHLPSTSRLKAVRLF-NISSSFWRGDSSRESMQRIYGIAFPSEKLLKEHLERLEE 268

Query: 241 SEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQ 298
           + KRDHR+L +E+ LF ++ + GSG+  W  KG  I Q L ++++  + +  Y  + TP 
Sbjct: 269 ARKRDHRRLGQELKLFMLSPEIGSGLPVWLPKGAIIRQELETFLKDEQRRRGYLPVYTPH 328

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           + +  L+++SGH+  Y  + F      D       + LKPMNCP H  +++  ++SYR+L
Sbjct: 329 IGNIELYKRSGHYPYYSDSQFPPLTYHDEDGKQEQYLLKPMNCPHHHLIYSSEMRSYRDL 388

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RL EFG+VYR+E SG L+GL+R RGFTQDD+H++C  +Q+ +E     +L   +++  
Sbjct: 389 PIRLTEFGTVYRHEQSGELNGLVRARGFTQDDSHIYCRPDQLVDEICNAIDLTQFVFRTL 448

Query: 419 GFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           GF+ +  +LS    +      G+  +W+ AE  +K   D +       I   + +GE +F
Sbjct: 449 GFDAVETRLSMHDPENQTKYGGTPEVWEQAEKDVKEAADRMG------IKYFIGIGEASF 502

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK ++I++DA+GR WQ GT+QVD+ +P RF+  YV +  +K  PV+IHRA FGS+ERF
Sbjct: 503 YGPKIDFIVRDALGRKWQLGTVQVDYVMPERFDLTYVGNDGQKHRPVVIHRAPFGSMERF 562

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
           IG++IE+  GN PLWL+P+QA+V  I     +YA  + N + +  +  E D R+E I  K
Sbjct: 563 IGVLIEHTAGNFPLWLAPVQAVVLPIAEDVHDYAAGVRNAMLAAGIRTELDLRSEKIGKK 622

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IRE  + KIP +++ G KE  + ++ +RR        +S+ D I  L +E
Sbjct: 623 IRESELSKIPYMVVVGQKEEEKGAVSLRRHRKGDEGTLSIQDMIERLREE 672


>gi|254881560|ref|ZP_05254270.1| threonyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
 gi|294778842|ref|ZP_06744259.1| threonine--tRNA ligase [Bacteroides vulgatus PC510]
 gi|254834353|gb|EET14662.1| threonyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
 gi|294447295|gb|EFG15878.1| threonine--tRNA ligase [Bacteroides vulgatus PC510]
          Length = 646

 Score =  629 bits (1621), Expect = e-178,   Method: Composition-based stats.
 Identities = 260/649 (40%), Positives = 391/649 (60%), Gaps = 19/649 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+TFPDGS++ +    TG  +AESIS  LA+  +A  +NG+  DLS P+  + +  + 
Sbjct: 1   MIKITFPDGSVREYNEGVTGLQIAESISSRLAQDVLACGVNGETIDLSRPINEDANFVLY 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
             ED +      H+ AH++AEA+Q ++P +Q  IGP IE+GFYYD D  E      +L  
Sbjct: 61  KWEDEQGKHAFWHTSAHLLAEALQELYPGIQFGIGPAIENGFYYDVDPGEAIIKEADLPA 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE KM E+ A+    ++Q ++ E A + F  + E YK E++  +    ++T Y QG + D
Sbjct: 121 IEAKMAELAAKKEILVRQSIAKEDALKKFGERGETYKCELISEL-EDGHITTYTQGAFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ ST  +K   KL+ VAGAYWRG  +R  ++RIYG  +  ++ L +YL  LEE+
Sbjct: 180 LCRGPHLTSTAPIK-AIKLLSVAGAYWRGQEDRKQMTRIYGITFPKKKMLDEYLVMLEEA 238

Query: 242 EKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           +KRDHRK+ +EMDLF      G G+  W  KG  +   L  ++RR + + DY+E+  P +
Sbjct: 239 KKRDHRKIGKEMDLFMFTDMVGKGLPMWLPKGTALRIRLQDFLRRIQARYDYQEVMCPPI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +++L+  SGH+  Y  + F       T ++   + LKPMNCP H  ++ +  +SY++LP
Sbjct: 299 GNKNLYITSGHYAKYGKDSFQ---PIHTPEEGEEYFLKPMNCPHHCMIYKNSPRSYKDLP 355

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AEFG+V R E SG LHGL RVR FTQDDAH+FC  +Q+  E L++ ++I  ++K   
Sbjct: 356 LRIAEFGTVCRYEQSGELHGLTRVRSFTQDDAHLFCRPDQVKEEFLRVMDIINIVFKSMN 415

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           FE +  ++S R     EK +GSD  W+ AE  +    +      +  +   V  GE AFY
Sbjct: 416 FENVEAQISLRDKVNREKYIGSDENWEKAEQAIIEACE------EKGLTAKVEYGEAAFY 469

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDAIGR WQ GTIQVD+NLP RF   Y+ S ++K  PVMIHRA FGS+ERF+
Sbjct: 470 GPKLDFMVKDAIGRRWQLGTIQVDYNLPERFQLEYMGSDNQKHRPVMIHRAPFGSMERFV 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE+  G  PLWL+P Q  +  I+    EYA+++   L+   +    D RNE I  KI
Sbjct: 530 AVLIEHTAGKFPLWLTPDQVAILPISEKFNEYAEQVKAELRKFDVRAIVDDRNEKIGRKI 589

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R++ +K+IP ++I G+KEA    + +R+ G      + + +    L +E
Sbjct: 590 RDNEMKRIPYMLIVGEKEAENGEVAVRKQGEGDKGTMKIEEFGKNLAEE 638


>gi|298384716|ref|ZP_06994276.1| threonine--tRNA ligase [Bacteroides sp. 1_1_14]
 gi|298262995|gb|EFI05859.1| threonine--tRNA ligase [Bacteroides sp. 1_1_14]
          Length = 646

 Score =  629 bits (1621), Expect = e-178,   Method: Composition-based stats.
 Identities = 258/649 (39%), Positives = 388/649 (59%), Gaps = 19/649 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+TFPDGS++ +     G  +AESIS  LA+  +A  +NG+  DL  P+  +    + 
Sbjct: 1   MIKITFPDGSVREYNEGVNGLQIAESISSRLAQDVLACGVNGETYDLGRPINEDADFVLY 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
             +D        H+ AH++AEA+Q ++P +Q  IGP IE+GFYYD D  E      +L  
Sbjct: 61  KWDDEEGKHAFWHTSAHLLAEALQELYPGIQFGIGPAIENGFYYDVDPGEAVIKESDLPV 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE KM E+ A+    +++ +S   A ++F  + E YK E++  +    ++T Y QG + D
Sbjct: 121 IEAKMLELSAKKEAVVRESISKTDALKMFGDRGETYKCELISEL-EDGHITTYTQGAFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ +T  +K   KL  VAGAYWRG  +R ML+RIYG  +  ++ L +YL  LEE+
Sbjct: 180 LCRGPHLMTTAPIK-AIKLTTVAGAYWRGHEDRKMLTRIYGITFPKKKMLDEYLVLLEEA 238

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           +KRDHRK+ +EM LF  +E    G+  W  KG  +   L  ++RR + + DY+E+ TP +
Sbjct: 239 KKRDHRKIGKEMQLFMFSETVGKGLPMWLPKGTALRLRLQEFLRRIQTRYDYQEVITPPI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            ++ L+  SGH+  Y  + F       T ++   + LKPMNCP H  ++ +  +SY++LP
Sbjct: 299 GNKLLYVTSGHYAKYGKDAFQ---PIHTPEEGEEYFLKPMNCPHHCEIYKNFPRSYKDLP 355

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AEFG+V R E SG LHGL RVR FTQDDAH+FC  +Q+ +E L++ ++I  +++   
Sbjct: 356 LRIAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKDEFLRVMDIISIVFRSMN 415

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           F+    ++S R     EK +GSD  W+ AE  +    +      +  +   +  GE AFY
Sbjct: 416 FQNFEAQISLRDKVNREKYIGSDDNWEKAEQAIIEACE------EKGLPAKIEYGEAAFY 469

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDAIGR WQ GTIQVD+NLP RF   Y+ S ++K  PVMIHRA FGS+ERF+
Sbjct: 470 GPKLDFMVKDAIGRRWQLGTIQVDYNLPERFELEYMGSDNQKHRPVMIHRAPFGSMERFV 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE+  G  PLWL+P Q  +  I+    EYA+++   LK H +    D RNE I  KI
Sbjct: 530 AVLIEHTAGKFPLWLTPDQVAILPISEKFNEYAEQVKMYLKMHEIRAIVDDRNEKIGRKI 589

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R++ +K+IP ++I G+KEA    + +RR G      +   +   IL +E
Sbjct: 590 RDNEMKRIPYMLIVGEKEAENGEVSVRRQGEGDKGTMKYEEFAKILNEE 638


>gi|317487879|ref|ZP_07946471.1| threonyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA]
 gi|325830610|ref|ZP_08164031.1| threonine--tRNA ligase [Eggerthella sp. HGA1]
 gi|316913005|gb|EFV34522.1| threonyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA]
 gi|325487356|gb|EGC89798.1| threonine--tRNA ligase [Eggerthella sp. HGA1]
          Length = 637

 Score =  629 bits (1621), Expect = e-178,   Method: Composition-based stats.
 Identities = 273/647 (42%), Positives = 405/647 (62%), Gaps = 15/647 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           + +  PDGS K     +T +DVA SI   LAK A+A  +N +  DLS PV EG S+ I+T
Sbjct: 1   MNIVLPDGSKKELADGSTVADVAASIGAGLAKAALAGIVNDQPVDLSAPVAEGDSVAIVT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +    L ++RHS AH+MA A+  ++ +VQ  +GP IEDGFYYD   ++  S D+ A IE
Sbjct: 61  AKSDEGLELLRHSTAHVMAAALVDLYGDVQFGVGPAIEDGFYYDVKLDRALSPDDFAAIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M EI+  D  F ++ ++  +A E+     + +K+E++  +P    +T Y  G++ DLC
Sbjct: 121 ARMAEIVKADEAFERRVVTRAEAEEI--FASQPFKLELIAELPEDAVITTYTIGKFTDLC 178

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG++  F KL K+AGAYWRGD+ R ML+RIYGTA+  Q+EL ++L  LEE+EK
Sbjct: 179 RGPHLPSTGKLGAF-KLTKLAGAYWRGDAEREMLTRIYGTAFFKQKELDEHLRNLEEAEK 237

Query: 244 RDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLD 301
           RDHRKL RE+ ++ +      G+  +  KG ++ +T+  ++RR   +  YEE+ TP V +
Sbjct: 238 RDHRKLGRELGIYTMDPLAGVGLPMYLPKGARVIRTMQEWLRRDLYERGYEEVITPHVYN 297

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLR--TFALKPMNCPGHVAVFNHGLKSYRELP 359
             +W+ SGH+  Y+ NM+     + T +D R   +A+KPMNCPGHV ++   L SYR+LP
Sbjct: 298 ADVWKTSGHYGFYKENMYFFNINEGTDEDPRLTEYAVKPMNCPGHVMLYKSELHSYRDLP 357

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R  EFG+VYR+E SG +HGL+R RGFTQDDAHVFCT++Q+ +E + I +L+  I   FG
Sbjct: 358 LRYFEFGTVYRHEMSGVVHGLLRARGFTQDDAHVFCTRDQVVDEVVAILDLVDHIMSTFG 417

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F+    ++STRPEK +G+D +W+ A N +K         ++  +   +  G+GAFYGPK 
Sbjct: 418 FQYEA-EISTRPEKSIGTDDMWEHATNALKEA------CARHELAYDINEGDGAFYGPKI 470

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +  +KDAIGR WQC T+QVDFN+P RF   Y    + +  P M+HRA+FGSIERF+GI+I
Sbjct: 471 DIKVKDAIGRTWQCSTVQVDFNMPERFELTYRTEDNTEERPWMLHRAIFGSIERFLGILI 530

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E++ G LPLWL+P+Q  V  +     E A E+A  LK+    IE   +NE +  KI +  
Sbjct: 531 EHYAGALPLWLAPVQVAVLPLADRHNEAAHELAKQLKAAGGRIEVYDQNEPMRVKIAKAQ 590

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
            +KIP +++ GDKE    ++ +R           +   +  L + +L
Sbjct: 591 SQKIPYMVVLGDKEIENGTVSVRERHEGDLGAWPVEQLVEKLREAAL 637


>gi|328710126|ref|XP_001950747.2| PREDICTED: threonyl-tRNA synthetase, cytoplasmic-like
           [Acyrthosiphon pisum]
          Length = 714

 Score =  629 bits (1621), Expect = e-178,   Method: Composition-based stats.
 Identities = 241/646 (37%), Positives = 374/646 (57%), Gaps = 22/646 (3%)

Query: 3   SDIKLTFPDGSIKNF-PVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIE 60
             I +TFPDG   N     +T  DVA+ IS+ LA   V   +NG++ DL  P+  + +++
Sbjct: 73  EPITVTFPDGKTTNAKAWQSTPYDVAKGISQGLADNTVIAKVNGELWDLDRPLEKDSTLQ 132

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDEL 119
           ++  ++  +  V  HS AH++ EA++ I+    +  GP IE GFYYD   E +  S+ + 
Sbjct: 133 LLKIDNEEAQKVFWHSSAHMLGEAMERIYGGC-LCYGPPIEGGFYYDMFIENKGVSNFDF 191

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             +E  +++I+    PF +  +S E   E+F+     +KV IL         T+YR G  
Sbjct: 192 PVMENLVKQIVKEKQPFERLEVSKEDLLEMFKY--NEFKVRILNEKVTTPTTTIYRCGPL 249

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPH+R TG+VK F K++K +  YW G+S    L R+YG +++  +++ ++  F E
Sbjct: 250 IDLCRGPHIRHTGKVKAF-KVIKNSATYWEGNSTAETLQRVYGISFSDNKQMKEWEKFQE 308

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+ +RDHRK+ RE +LF   E   G  F+  KG  I+ TLI +++ + +   ++E+ +P 
Sbjct: 309 EAARRDHRKIGREQELFFFHELSPGSCFFQPKGAHIYNTLIEFIKSEYRKRGFQEVVSPN 368

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           + +  LWQ SGHW  Y  NMF+         +  T+ALKPMNCPGH  +F+H  +S+REL
Sbjct: 369 IYNVKLWQTSGHWAHYAENMFSFDV------EKETYALKPMNCPGHCLMFDHRNRSWREL 422

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+A+FG ++RNE SG+L GL RVR F QDDAH+FCT +Q+  E +   + +  +Y  F
Sbjct: 423 PLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCTTDQIGQEMMSSLDFLRHVYTVF 482

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF   + +LSTRPEK +G   +W++AE  +   L++            +  G+GAFYGPK
Sbjct: 483 GFTFHL-RLSTRPEKYLGELEMWENAEKQLADSLNSFGEPW------TLNPGDGAFYGPK 535

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +  + DA+ R  QC TIQ+DF LP RFN  +++   EK  PV+IHRA+FGS+ER I I+
Sbjct: 536 IDITISDALKRQHQCATIQLDFQLPIRFNLNFISESGEKKRPVIIHRAIFGSVERMIAIL 595

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FRNETINYKIRE 597
            E+F G  P WLSP QAIV  +     EY++++   +       + D    +T+N KIR 
Sbjct: 596 TESFAGKWPFWLSPRQAIVIPVGPQFDEYSEKVKKEIYEAGFMCDVDVDHGDTLNKKIRN 655

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             + +   I++ GDKE +  ++ +R   +    + S+ + I  L K
Sbjct: 656 AQLAQYNFILVVGDKEKTANTVNVRTRDNNVHGEFSIEETIQRLQK 701


>gi|258647088|ref|ZP_05734557.1| threonine--tRNA ligase [Prevotella tannerae ATCC 51259]
 gi|260853035|gb|EEX72904.1| threonine--tRNA ligase [Prevotella tannerae ATCC 51259]
          Length = 647

 Score =  628 bits (1620), Expect = e-178,   Method: Composition-based stats.
 Identities = 257/650 (39%), Positives = 401/650 (61%), Gaps = 20/650 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+TFPDGS++ F    TG  +AE +S  LA++ +A ++NG + +L+ P+  + +++++
Sbjct: 1   MIKVTFPDGSVREFEDGITGLQIAERLSAQLAREVLACSVNGNIVELNRPLTEDCTLKLL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ--PFSSDELA 120
             +D        H+ AH+MAEA+Q +WP  Q  IGP IE GFYYD    +    +  + A
Sbjct: 61  KWDDEEGKHAFWHTSAHLMAEAMQELWPGTQFGIGPAIEKGFYYDVMPPEGVTITEADFA 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IE KM E++ +  P +++ +S   A   FE   + YK E++  + A   +T Y QG + 
Sbjct: 121 KIENKMHELVQKKEPLVRKSISKTDALNFFEQHGQHYKNELIADL-ADGTITTYTQGNYT 179

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ +T  +K   K+M V+ AYWRGD  RP ++R+YG ++  ++ L +YL  LEE
Sbjct: 180 DLCRGPHLLNTAPIK-AIKVMAVSSAYWRGDEKRPQMTRVYGVSFPKKKMLDEYLQLLEE 238

Query: 241 SEKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           +++RDHRK+ REM+LF  +E  G G+  W  KG  + Q L+S++R+  K   Y E+ TP 
Sbjct: 239 AKRRDHRKIGREMELFMFSELVGKGLPIWLPKGTVLRQQLMSFLRKIQKRFGYMEVITPH 298

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +  ++L+  SGH+  Y  + F    A  T ++   + LKPMNCP H AV++    SY++L
Sbjct: 299 IGSKNLYVTSGHYAKYGKDSFQ---AIHTPEEGEEYMLKPMNCPHHCAVYSWQPHSYKDL 355

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG+VYR E SG LHGL RVRGFTQDDAH+FC  +Q+  E L++ ++I+ +++  
Sbjct: 356 PLRIAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCRPDQVKQEFLRVMDIIMIVFRAL 415

Query: 419 GFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            FE+   ++S R     EK +GSD +WD AE  +    +      +  +   +  GE AF
Sbjct: 416 NFEQFEAQISLRDKVKREKYIGSDDVWDKAEQAIIEACE------EKGLQAKIEYGEAAF 469

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK ++++KDA+GR WQ GTIQVD+NLP RF   Y    S+K  PVMIHRA FGS+ERF
Sbjct: 470 YGPKLDFMVKDALGRRWQLGTIQVDYNLPERFQLEYTGEDSKKHRPVMIHRAPFGSLERF 529

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             ++IE+  G+ PLWL P Q ++  I+    +YA ++   L++  +    D RNE +  K
Sbjct: 530 TAVLIEHTGGHFPLWLMPDQCVILPISERFNDYAHKVKEQLEAAGIRANIDERNEKVGRK 589

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IR++ +K IP +++ G+KE ++ S+ +R+ G  T + +++      + KE
Sbjct: 590 IRDNEMKHIPYLLVVGEKEQADGSVNVRKQGEGTQETMTIPMFAEKVLKE 639


>gi|78189671|ref|YP_380009.1| threonyl-tRNA synthetase [Chlorobium chlorochromatii CaD3]
 gi|123729828|sp|Q3APV9|SYT_CHLCH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|78171870|gb|ABB28966.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Chlorobium
           chlorochromatii CaD3]
          Length = 657

 Score =  628 bits (1620), Expect = e-178,   Method: Composition-based stats.
 Identities = 255/649 (39%), Positives = 392/649 (60%), Gaps = 16/649 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           I LT PD S++N  + +TG DVA SI R LA+ A+A+ +NG VCDL+  +  + +IEIIT
Sbjct: 11  IALTLPDRSVRNVAMGSTGYDVALSIGRKLAQDALAIKLNGVVCDLNTLINSDAAIEIIT 70

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
              P    +  HS +H+MA+A++ ++   +   GP IE GFYYD   E  F  ++L  IE
Sbjct: 71  FTSPEGPEIFWHSSSHLMAQAIEELFAGSKFGAGPAIEQGFYYDVSSEHRFREEDLRAIE 130

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFES-KKEAYKVEIL-ESIPAKENVTLYRQGEWFD 181
            +M EI  RDS   +Q +S E+A   F S + + YKVEIL E++   E V+LY QG++ D
Sbjct: 131 ARMLEISKRDSSVQRQEMSREEAIAFFTSVRNDPYKVEILTETLKNVERVSLYHQGDFTD 190

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LC GPH+ STG++K    L  ++ +YWRGDSNR  + RIYG  + +++ L +++  +EE+
Sbjct: 191 LCTGPHLPSTGKIK-AVLLTNISASYWRGDSNREQMQRIYGITFPSEKLLKEHVARIEEA 249

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQV 299
           ++RDHRKL  E++LF ++ + GSG+  W  KG  I   L S++R + +   Y  + TP +
Sbjct: 250 KRRDHRKLGAELELFLLSPEVGSGLPMWLPKGAIIRSELESFLREEQRKRGYVPVYTPHI 309

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +  L+++SGH+  Y  + F      D       + LKPMNCP H  +++  ++SYR+LP
Sbjct: 310 GNIELYKRSGHYPYYSDSQFPPLTYHDEDGKQEQYLLKPMNCPHHHLIYSSKMRSYRDLP 369

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R  EFG+VYR+E SG L+GL R RGFTQDD+H++C  +Q+ +E      L   ++K  G
Sbjct: 370 LRFTEFGTVYRHEQSGELNGLARARGFTQDDSHIYCRPDQLVDEICSAIELTQFVFKTLG 429

Query: 420 FEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           F ++  +LS        K  G+  +W+ AE  ++   + +       ++  + +GE +FY
Sbjct: 430 FAEVQTRLSLHDPANQAKYGGTAEVWEQAEKDVQEAAERMG------VDYFIGIGEASFY 483

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++I++DAIGR WQ GT+QVD+ +P RF+  YV S  +K  PV+IHRA FGS+ERFI
Sbjct: 484 GPKIDFIVRDAIGRKWQLGTVQVDYVMPERFDLTYVGSDGQKHRPVVIHRAPFGSMERFI 543

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
           G++IE+  GN PLWL+P+Q  V  I     +YA  +   L +  +  E D R+E IN KI
Sbjct: 544 GLLIEHTAGNFPLWLAPVQVAVLPIAEENHDYATTVYRRLLAAGIRAELDTRSEKINRKI 603

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R+  + K P +++ G KE +   + +RR       + +  + I  L +E
Sbjct: 604 RDAEMSKTPCMLVIGQKEQANGEVSLRRHRQGDAGRFATDELIETLKQE 652


>gi|147899539|ref|NP_001087812.1| threonyl-tRNA synthetase [Xenopus laevis]
 gi|51895835|gb|AAH81263.1| MGC86352 protein [Xenopus laevis]
          Length = 721

 Score =  628 bits (1620), Expect = e-178,   Method: Composition-based stats.
 Identities = 249/659 (37%), Positives = 368/659 (55%), Gaps = 25/659 (3%)

Query: 2   PSDIKLTFPDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
              IK+T PDG   +     +T   +A  IS+ LA   V   +NG V DL  P+  + ++
Sbjct: 78  SKAIKVTLPDGKQVDAESWKSTPYQIACGISQGLADNTVVAKVNGAVWDLDRPLEEDCTL 137

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQP-FSSDE 118
            ++  +D  + AV  HS AHIM EA++ ++    +  GP IE+GFYYD   +    SS++
Sbjct: 138 ALLKFDDEEAQAVYWHSSAHIMGEAMERVYGGC-LCYGPPIENGFYYDMYLDDGGVSSND 196

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
              +E   ++I+     F +  +S E   E+F+     +K  IL         T+YR G 
Sbjct: 197 FTSLENLCKKIMKEKQQFERLEVSKETLLEMFKY--NKFKCRILNEKVDTPTTTVYRCGP 254

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLCRGPHVR TG++K   K+ K +  YW G ++   L R+YG ++   + L ++  F 
Sbjct: 255 LIDLCRGPHVRHTGKIK-ALKVHKNSSTYWEGKADMETLQRVYGISFPDPKMLKEWEKFQ 313

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
           EE++ RDHRKL +E +LF   E   G  F+  KG  I+  LI ++R++ +   ++E+ TP
Sbjct: 314 EEAKNRDHRKLGKEQELFFFHELSPGSCFFLPKGAYIYNQLIGFIRQEYRKRGFQEVVTP 373

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            V +  LWQ SGHW  Y  NMF+ +       +   FALKPMNCPGH  +F+H  +S+RE
Sbjct: 374 NVYNSKLWQTSGHWQHYSENMFSFEV------EKEIFALKPMNCPGHCLMFDHRPRSWRE 427

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+A+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+  E     + + S+Y  
Sbjct: 428 LPMRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEEEIKSCLDFLRSVYNV 487

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF   +  LSTRPEK +G   +W+ AE  ++  L+             +  G+GAFYGP
Sbjct: 488 FGFTFKLN-LSTRPEKFLGDIEVWNQAEKQLENSLNEFGEKW------VLNPGDGAFYGP 540

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIG 536
           K +  +KDAIGR  QC TIQ+DF LP RFN  YV+    +K  PV+IHRA+ GS+ER I 
Sbjct: 541 KIDIQIKDAIGRYHQCATIQLDFQLPIRFNLTYVSHDGDDKKRPVIIHRAILGSVERMIA 600

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKI 595
           I+ ENF G  PLWLSP Q +V  +  +  EYAQ++        L  + D     T+N KI
Sbjct: 601 ILTENFGGKWPLWLSPQQVMVVPVGPTCDEYAQQVREQFHRAGLMTDVDLDPGCTLNKKI 660

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL--TKESLPPDCQK 652
           R   + +   I++ G+KE +  ++ IR   +    + ++ + I  L   KES   + ++
Sbjct: 661 RNAQLAQYNFILVVGEKEKASETVNIRTRDNKVHGERTVTETIQRLLQLKESRAKNSEE 719


>gi|265751997|ref|ZP_06087790.1| threonyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
 gi|263236789|gb|EEZ22259.1| threonyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
          Length = 646

 Score =  628 bits (1619), Expect = e-178,   Method: Composition-based stats.
 Identities = 260/649 (40%), Positives = 392/649 (60%), Gaps = 19/649 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+TFPDGS++ +    TG  +AESIS  LA+  +A  +NG+  DLS P+  + +  + 
Sbjct: 1   MIKITFPDGSVREYNEGVTGLQIAESISSRLAQDVLACGVNGETIDLSRPINEDANFVLY 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
             ED +      H+ AH++AEA+Q ++P +Q  IGP IE+GFYYD D  E      +L  
Sbjct: 61  KWEDEQGKHAFWHTSAHLLAEALQELYPGIQFGIGPAIENGFYYDVDPGEAIIKEADLPA 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE KM E+ A+    ++Q ++ E A + F  + E YK E++  +    ++T Y QG + D
Sbjct: 121 IEAKMAELAAKKEILVRQSIAKEDALKKFGERGETYKCELISEL-EDGHITTYTQGAFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ ST  +K   KL+ VAGAYWRG  +R  ++RIYG  +  ++ L +YL  LEE+
Sbjct: 180 LCRGPHLTSTAPIK-AIKLLSVAGAYWRGQEDRKQMTRIYGITFPKKKMLDEYLVMLEEA 238

Query: 242 EKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           +KRDHRK+ +EMDLF      G G+  W  KG  +   L  ++RR + + DY+E+  P +
Sbjct: 239 KKRDHRKIGKEMDLFMFTDMVGKGLPMWLPKGTALRIRLQDFLRRIQARYDYQEVMCPPI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +++L+  SGH+  Y  + F       T ++   + LKPMNCP H  ++ +  +SY++LP
Sbjct: 299 GNKNLYITSGHYAKYGKDSFQ---PIHTPEEGEEYFLKPMNCPHHCMIYKNSPRSYKDLP 355

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AEFG+V R E SG LHGL RVR FTQDDAH+FC  +Q+  E L++ ++I  ++K   
Sbjct: 356 LRIAEFGTVCRYEQSGELHGLTRVRSFTQDDAHLFCRPDQVKEEFLRVMDIINIVFKSMN 415

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           FE +  ++S R     EK +GSD  W+ AE  +    +      +  +   V  GE AFY
Sbjct: 416 FENVEAQISLRDKVNREKYIGSDENWEKAEQAIIEACE------EKGLTAKVEYGEAAFY 469

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDAIGR WQ GTIQVD+NLP RF   Y+ S ++K  PVMIHRA FGS+ERF+
Sbjct: 470 GPKLDFMVKDAIGRRWQLGTIQVDYNLPERFQLEYMGSDNQKHRPVMIHRAPFGSMERFV 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE+  G  PLWL+P Q  +  I+    EYA+++   L+ + +    D RNE I  KI
Sbjct: 530 AVLIEHTAGKFPLWLTPDQVAILPISEKFNEYAEKVKAELRKYDVRAIVDDRNEKIGRKI 589

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R++ +K+IP ++I G+KEA    + +R+ G      + + +    L +E
Sbjct: 590 RDNEMKRIPYMLIVGEKEAENGEVAVRKQGEGDKGTMKIEEFGKNLAEE 638


>gi|254429307|ref|ZP_05043014.1| threonyl-tRNA synthetase [Alcanivorax sp. DG881]
 gi|196195476|gb|EDX90435.1| threonyl-tRNA synthetase [Alcanivorax sp. DG881]
          Length = 638

 Score =  628 bits (1619), Expect = e-177,   Method: Composition-based stats.
 Identities = 306/630 (48%), Positives = 427/630 (67%), Gaps = 13/630 (2%)

Query: 9   FPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDP 67
            PDG+   F   A+  ++A  IS+ LAK+A+A   N  + D+  P+ +G ++EIIT E  
Sbjct: 7   LPDGASMEFEQPASAFEIAGRISKKLAKQALAAKANDNLIDVYLPIDDGATVEIITRETD 66

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQ 127
            +L +IRH  AH+MAEAVQ ++P+ QV IGP I +GFYYDF ++ PF+ D+L  IEK+MQ
Sbjct: 67  EALELIRHDAAHVMAEAVQELFPDTQVTIGPTITNGFYYDFHRDTPFTPDDLKTIEKRMQ 126

Query: 128 EIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPH 187
           +I+ R+    ++    ++A   F  K E +K EI+  +PA + V+LYRQGE+ DLCRGPH
Sbjct: 127 DIVRRNEEIRREVWDRDEAVAFFLEKGEEFKAEIIRELPADQEVSLYRQGEFIDLCRGPH 186

Query: 188 VRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHR 247
           + ST ++   FKLMKVAGAYWRGD+N   L RIYGTAW  ++EL  +L  +EE+EKRDHR
Sbjct: 187 LPSTSKLGDGFKLMKVAGAYWRGDANNAQLQRIYGTAWRDKKELNAHLKQIEEAEKRDHR 246

Query: 248 KLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ 306
           KLAREM LFHI ++  G +FWH KGW++ Q L +Y+R K++   Y+E++TPQ++D+ LW+
Sbjct: 247 KLAREMGLFHIQQEAVGSMFWHPKGWRMRQNLENYIRGKMEKGGYQEVSTPQMMDRILWE 306

Query: 307 QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFG 366
           QSGHWD Y  +MF V        D +  A+KPMNCPGHV +F  G+ SYR+LP+RL EF 
Sbjct: 307 QSGHWDKYGEDMFTV-----CTHDHKEMAVKPMNCPGHVQIFKQGITSYRDLPIRLGEFT 361

Query: 367 SVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK 426
           +++RNE  G+LHGLMR R F+QDDAH+FCT+EQ+  E      ++  +Y+DFGF+   +K
Sbjct: 362 TLFRNEAHGALHGLMRARSFSQDDAHIFCTEEQINEETAGFIKMLREVYEDFGFDSFRIK 421

Query: 427 LSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDA 486
            S RP+ R GSD  WD AE  ++  ++++       +   +  GEGAFYGPK E++L+DA
Sbjct: 422 FSDRPDNRAGSDETWDKAEGALRSAVESLG------LECELNPGEGAFYGPKLEFVLRDA 475

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNL 546
           IGRDWQCGT+QVDF LP R +A YV     +  PVM+HRAV GS+ERF+GI+IE+  G+L
Sbjct: 476 IGRDWQCGTLQVDFVLPDRLDAEYVAEDGSRQRPVMLHRAVLGSLERFLGILIESTAGHL 535

Query: 547 PLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPII 606
           PLWL+P    + TIT+SA EYA  +   L +  +  E D RNE I +K+REHS  K P I
Sbjct: 536 PLWLAPRPVAICTITNSADEYATAVQQKLVAAGVPAELDIRNEKIGFKVREHSRAKTPRI 595

Query: 607 IICGDKEASERSIGIRRFGSTTTQKVSLLD 636
            + G++EA +  + IR  GS  T+ + L +
Sbjct: 596 WVIGEQEAQQNQVAIRTLGSQATETMDLDE 625


>gi|150006539|ref|YP_001301283.1| threonyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482]
 gi|319642944|ref|ZP_07997580.1| threonyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
 gi|166223322|sp|A6L7J7|SYT_BACV8 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|149934963|gb|ABR41661.1| threonyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482]
 gi|317385492|gb|EFV66435.1| threonyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
          Length = 646

 Score =  628 bits (1619), Expect = e-177,   Method: Composition-based stats.
 Identities = 260/649 (40%), Positives = 391/649 (60%), Gaps = 19/649 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+TFPDGS++ +    TG  +AESIS  LA+  +A  +NG+  DLS P+  + +  + 
Sbjct: 1   MIKITFPDGSVREYNEGVTGLQIAESISSRLAQDVLACGVNGETIDLSRPINEDANFVLY 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
             ED +      H+ AH++AEA+Q ++P +Q  IGP IE+GFYYD D  E      +L  
Sbjct: 61  KWEDEQGKHAFWHTSAHLLAEALQELYPGIQFGIGPAIENGFYYDVDPGEAIIKEADLPA 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE KM E+ A+    ++Q ++ E A + F  + E YK E++  +    ++T Y QG + D
Sbjct: 121 IEAKMAELAAKKEILVRQSIAKEDALKKFGERGETYKCELISEL-EDGHITTYTQGAFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ ST  +K   KL+ VAGAYWRG  +R  ++RIYG  +  ++ L +YL  LEE+
Sbjct: 180 LCRGPHLTSTAPIK-AIKLLTVAGAYWRGQEDRKQMTRIYGITFPKKKMLDEYLVMLEEA 238

Query: 242 EKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           +KRDHRK+ +EMDLF      G G+  W  KG  +   L  ++RR + + DY+E+  P +
Sbjct: 239 KKRDHRKIGKEMDLFMFTDMVGKGLPMWLPKGTALRIRLQDFLRRIQARYDYQEVMCPPI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +++L+  SGH+  Y  + F       T ++   + LKPMNCP H  ++ +  +SY++LP
Sbjct: 299 GNKNLYITSGHYAKYGKDSFQ---PIHTPEEGEEYFLKPMNCPHHCMIYKNSPRSYKDLP 355

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AEFG+V R E SG LHGL RVR FTQDDAH+FC  +Q+  E L++ ++I  ++K   
Sbjct: 356 LRIAEFGTVCRYEQSGELHGLTRVRSFTQDDAHLFCRPDQVKEEFLRVMDIINIVFKSMN 415

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           FE +  ++S R     EK +GSD  W+ AE  +    +      +  +   V  GE AFY
Sbjct: 416 FENVEAQISLRDKVNREKYIGSDENWEKAEQAIIEACE------EKGLTAKVEYGEAAFY 469

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDAIGR WQ GTIQVD+NLP RF   Y+ S ++K  PVMIHRA FGS+ERF+
Sbjct: 470 GPKLDFMVKDAIGRRWQLGTIQVDYNLPERFQLEYMGSDNQKHRPVMIHRAPFGSMERFV 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE+  G  PLWL+P Q  +  I+    EYA+++   L+   +    D RNE I  KI
Sbjct: 530 AVLIEHTAGKFPLWLTPDQVAILPISEKFNEYAEQVKAELRKFDVRAIVDDRNEKIGRKI 589

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R++ +K+IP ++I G+KEA    + +R+ G      + + +    L +E
Sbjct: 590 RDNEMKRIPYMLIVGEKEAENGEVAVRKQGEGDKGTMKIEEFGKNLAEE 638


>gi|34763461|ref|ZP_00144407.1| Threonyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
 gi|237741623|ref|ZP_04572104.1| threonyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
 gi|294785766|ref|ZP_06751054.1| threonine--tRNA ligase [Fusobacterium sp. 3_1_27]
 gi|27886876|gb|EAA24002.1| Threonyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
 gi|229429271|gb|EEO39483.1| threonyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
 gi|294487480|gb|EFG34842.1| threonine--tRNA ligase [Fusobacterium sp. 3_1_27]
          Length = 637

 Score =  628 bits (1619), Expect = e-177,   Method: Composition-based stats.
 Identities = 285/640 (44%), Positives = 405/640 (63%), Gaps = 17/640 (2%)

Query: 11  DGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRS 69
           +G  K F  +    ++A+  S SLAKK+V   ++GK  D+S  +  +  +E I  + P  
Sbjct: 6   NGESKEFNNNVNMFEIAKGFSNSLAKKSVGAKVDGKNVDMSYVLDHDADVEFIDIDSPEG 65

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
             ++RHS AH+MA+AV  ++P+ +V IGP+IE+GFYYDFD  + F+ ++L +IE +M++I
Sbjct: 66  EDIVRHSTAHLMAQAVLRLYPDTKVTIGPVIENGFYYDFDPVEQFTEEDLEKIEAEMKKI 125

Query: 130 IARDSPFLKQYLSHEKARELFES-KKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           +  +    K  L  ++A + F    K  YKVEI+E+IP  E V+ Y+QG++ DLCRG HV
Sbjct: 126 VKENIKLEKYVLPRDEAVQYFRDVDKNKYKVEIVEAIPQGEQVSFYKQGDFTDLCRGTHV 185

Query: 189 RSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRK 248
            STG +K F KL  VAGAYWRG+S   ML RIYG +++ +  L ++L  +EE+EKRDHRK
Sbjct: 186 PSTGYLKAF-KLRTVAGAYWRGNSKNKMLQRIYGYSFSNEDRLKKHLKLMEEAEKRDHRK 244

Query: 249 LAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQ 307
           L +E++LF ++E G G  F+  KG  I   LI   R++ +   Y ++ TP +L++ LW+ 
Sbjct: 245 LGKELELFFLSEYGPGFPFFLPKGMIIRNVLIDLWRKEHEKAGYLQLETPIMLNKELWEI 304

Query: 308 SGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGS 367
           SGHW +YR NM+  +       D   FA+KPMNCPG V  F H L SY++LP RLAE G 
Sbjct: 305 SGHWFNYRENMYTSEI------DELEFAIKPMNCPGGVLSFKHQLHSYKDLPARLAELGR 358

Query: 368 VYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKL 427
           V+R+E SG+LHGLMRVR FTQDD+H+F T +Q+ +E + + NLI   Y      +  ++L
Sbjct: 359 VHRHEFSGALHGLMRVRSFTQDDSHIFMTPDQVQDEIIGVVNLIDKFYSKLFGFEYEIEL 418

Query: 428 STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAI 487
           ST+PEK +GS  +WD AE  + G LD +           +  G+GAFYGPK ++ +KDAI
Sbjct: 419 STKPEKAIGSQEIWDMAEAALAGALDKLGR------KYKINPGDGAFYGPKLDFKIKDAI 472

Query: 488 GRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           GR WQCGTIQ+DFNLP RF+  Y+    EK  PVM+HR ++GSIERFIGI+IE++ G  P
Sbjct: 473 GRMWQCGTIQLDFNLPERFDVTYIGEDGEKHRPVMLHRVIYGSIERFIGILIEHYAGAFP 532

Query: 548 LWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH-SIKKIPII 606
           +WL+P+Q  V T+    + YA+EI N L+   +  E D RNETI YKIRE     KIP+ 
Sbjct: 533 MWLAPVQVKVLTLNDECIPYAKEIMNKLEELGIRAELDDRNETIGYKIREANGKYKIPMQ 592

Query: 607 IICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           +I G  E   + + IRRFGS       L +    +  E+ 
Sbjct: 593 LIIGKNEVENKGVNIRRFGSKDQFTKPLDEFYNYVVDEAT 632


>gi|212691282|ref|ZP_03299410.1| hypothetical protein BACDOR_00773 [Bacteroides dorei DSM 17855]
 gi|237712289|ref|ZP_04542770.1| threonyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA]
 gi|237726428|ref|ZP_04556909.1| threonyl-tRNA synthetase [Bacteroides sp. D4]
 gi|212666514|gb|EEB27086.1| hypothetical protein BACDOR_00773 [Bacteroides dorei DSM 17855]
 gi|229434954|gb|EEO45031.1| threonyl-tRNA synthetase [Bacteroides dorei 5_1_36/D4]
 gi|229453610|gb|EEO59331.1| threonyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA]
          Length = 646

 Score =  628 bits (1619), Expect = e-177,   Method: Composition-based stats.
 Identities = 259/649 (39%), Positives = 391/649 (60%), Gaps = 19/649 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+TFPDGS++ +    TG  +AESIS  LA+  +A  +NG+  DLS P+  + +  + 
Sbjct: 1   MIKITFPDGSVREYNEGVTGLQIAESISSRLAQDVLACGVNGETIDLSRPINEDANFVLY 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
             ED +      H+ AH++AEA+Q ++P +Q  IGP IE+GFYYD D  E      +L  
Sbjct: 61  KWEDEQGKHAFWHTSAHLLAEALQELYPGIQFGIGPAIENGFYYDVDPGEAIIKEADLPA 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE KM E+ A+    ++Q ++ E A + F  + E YK E++  +    ++T Y QG + D
Sbjct: 121 IEAKMAELAAKKEILVRQSIAKEDALKKFGERGETYKCELISEL-EDGHITTYTQGAFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ ST  +K   KL+ VAGAYWRG  +R  ++RIYG  +  ++ L +YL  LEE+
Sbjct: 180 LCRGPHLTSTAPIK-AIKLLSVAGAYWRGQEDRKQMTRIYGITFPKKKMLDEYLVMLEEA 238

Query: 242 EKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           +KRDHRK+ +EMDLF      G G+  W  KG  +   L  ++RR + + DY+E+  P +
Sbjct: 239 KKRDHRKIGKEMDLFMFTDMVGKGLPMWLPKGTALRIRLQDFLRRIQARYDYQEVMCPPI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +++L+  SGH+  Y  + F       T ++   + LKPMNCP H  ++ +  +SY++LP
Sbjct: 299 GNKNLYITSGHYAKYGKDSFQ---PIHTPEEGEEYFLKPMNCPHHCMIYKNSPRSYKDLP 355

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AEFG+V R E SG LHGL RVR FTQDDAH+FC  +Q+  E L++ ++I  ++K   
Sbjct: 356 LRIAEFGTVCRYEQSGELHGLTRVRSFTQDDAHLFCRPDQVKEEFLRVMDIINIVFKSMN 415

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           FE +  ++S R     EK +GSD  W+ AE  +    +      +  +   V  GE AFY
Sbjct: 416 FENVEAQISLRDKVNREKYIGSDENWEKAEQAIIEACE------EKGLTAKVEYGEAAFY 469

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDAIGR WQ GTIQVD+NLP RF   Y+ S ++K  PVMIHRA FGS+ERF+
Sbjct: 470 GPKLDFMVKDAIGRRWQLGTIQVDYNLPERFQLEYMGSDNQKHRPVMIHRAPFGSMERFV 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE+  G  PLWL+P Q  +  I+    EYA+++   L+   +    D RNE I  KI
Sbjct: 530 AVLIEHTAGKFPLWLTPDQVAILPISEKFNEYAEKVKAELRKFDVRAIVDDRNEKIGRKI 589

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R++ +K+IP ++I G+KEA    + +R+ G      + + +    + +E
Sbjct: 590 RDNEMKRIPYMLIVGEKEAENGEVAVRKQGEGDKGTMKIEEFGKNIAEE 638


>gi|330752453|emb|CBL87403.1| threonyl-tRNA synthetase [uncultured Flavobacteria bacterium]
          Length = 646

 Score =  628 bits (1619), Expect = e-177,   Method: Composition-based stats.
 Identities = 253/649 (38%), Positives = 390/649 (60%), Gaps = 19/649 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            I +T PDGS +++    T  DVA+ IS  LA+  ++   N  V + S  ++ +G++ + 
Sbjct: 1   MIHITLPDGSKRSYENPLTVIDVAKDISEGLARNVISANFNNVVAETSTLLKSDGTLILY 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
           T +DP       HS +H++A+A++ ++P V+++IGP IE+GFYYD D      S  +L  
Sbjct: 61  TWKDPEGKKAFWHSSSHVLAQALEELYPGVKLSIGPAIENGFYYDVDLGNLSISEKDLGA 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE KM EI      F  + +S   A + +  +   YKVE++E++   E +T      + D
Sbjct: 121 IETKMLEISREKHDFKMKSVSKSDALDKYRKEANPYKVELIENLTDGE-ITFCDHDSFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG H+ +TG +K   KL+ VAGAYWRGD N   L+RIYG ++  Q+ L ++L  LEE+
Sbjct: 180 LCRGGHIPNTGLIK-AVKLLSVAGAYWRGDENNKQLTRIYGISFPKQKALKEHLALLEEA 238

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           +KRDHRKL ++++LF  ++    G+  W   G  +   L  ++++ ++K  YE ++TP +
Sbjct: 239 KKRDHRKLGKQLELFTFSKKVGQGLPLWLPNGAALRSRLEDFLKKAQVKAGYEMVSTPHI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             + L+  SGH++ Y  + F      +T K    F LKPMNCP H  ++N    SY+ELP
Sbjct: 299 GQKELYVTSGHYEKYGEDSFQ---PIETPKAEEEFLLKPMNCPHHCEIYNFKPYSYKELP 355

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
            R AEFG+VYR E SG LHGL RVRGFTQDDAH+FCT +Q+ +E   + +L++ +++  G
Sbjct: 356 KRYAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCTPDQLDSEFKNVIDLVLYVFRSLG 415

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           FE    ++S R  K     +GS   WD +E  +    +         ++  +  GE AFY
Sbjct: 416 FENFTAQVSLRDPKTPEKYIGSVDNWDKSEKAIINAAED------KGLDYVIETGEAAFY 469

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDA+GR WQ GTIQVD+NLP RF+  Y  + +E   PVMIHRA FGS+ERF+
Sbjct: 470 GPKLDFMVKDALGRSWQLGTIQVDYNLPERFDLTYKGADNESHRPVMIHRAPFGSLERFV 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            I++E+  GN PLWL P Q ++ TI+ +  +YAQ++ NLL+ + +    D R+ET+  KI
Sbjct: 530 AILLEHTAGNFPLWLMPQQVVILTISENYEKYAQKVLNLLEINEIRGLIDDRSETMGKKI 589

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R+  IKKIP +II G++E    ++ +R+ G      +SL   + ++  E
Sbjct: 590 RDAEIKKIPYMIIVGEQEEKSATLSVRQHGGEDLGNLSLEAFVKVVKAE 638


>gi|118095671|ref|XP_413774.2| PREDICTED: hypothetical protein [Gallus gallus]
          Length = 903

 Score =  627 bits (1618), Expect = e-177,   Method: Composition-based stats.
 Identities = 244/647 (37%), Positives = 366/647 (56%), Gaps = 23/647 (3%)

Query: 3   SDIKLTFPDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIE 60
             IK+T  DG I +      T   +A  IS+ LA  AV   +NG++ DL  P+  + ++E
Sbjct: 261 KPIKITLTDGKIADGESWKTTPYQLAVGISQGLASNAVIAKVNGELWDLDRPLEGDCTLE 320

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDEL 119
           ++T +D  + AV  HS AHI+ EA++  +    +  GP IE+GFYYD   E +  SS E 
Sbjct: 321 LLTFDDQEAQAVYWHSSAHILGEAMEGYYGGC-LCYGPPIENGFYYDMYIEDRGVSSTEF 379

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             +E + + II    PF +  +  E   ++F+  K  +K  IL         T+YR G  
Sbjct: 380 PALENRCKNIIKEKQPFERLEVKKEILLDMFKYNK--FKCRILNEKVNTPTTTVYRCGPL 437

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHVR TG++K   K+ K +  YW G ++   L RIYG ++   + + ++  F E
Sbjct: 438 IDLCRGPHVRHTGKIK-ALKIFKNSSTYWEGKADMETLQRIYGISFPDNKMMKEWEKFQE 496

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+  RDHRK+ +E +LF   +   G  F+  +G  ++ TL  ++R +    ++ E+ +P 
Sbjct: 497 EARNRDHRKIGKEQELFFFHDLSPGSCFFLPRGAFLYNTLTDFIREEYHRRNFTEVVSPN 556

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           + +  LW+ SGHW  Y  NMF+ +       +  TFALKPMNCPGH  +F H  +S+RE+
Sbjct: 557 IFNSKLWETSGHWQHYSENMFSFEI------EKETFALKPMNCPGHCLMFAHRPRSWREM 610

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLA+FG ++RNE SG+L GL RVR F QDDAH++CT EQ+  E     + + S+Y  F
Sbjct: 611 PLRLADFGVLHRNELSGTLSGLTRVRRFQQDDAHIYCTIEQIEEEIKGCLDFLKSVYSIF 670

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF   +  LSTRPE  +G   +WD AE  ++  LD         +   +  G+GAFYGPK
Sbjct: 671 GFTFQLH-LSTRPENYLGELEIWDHAEKQLQNSLDNFG------VQWTLNPGDGAFYGPK 723

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIGI 537
            +  +KDA+GR  QC TIQ+DF LP RFN  YV     +K  PV+IHRAV GS+ER I I
Sbjct: 724 IDIKIKDALGRYHQCATIQLDFQLPIRFNLTYVGKDGDDKKRPVIIHRAVLGSVERMIAI 783

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FRNETINYKIR 596
           + EN+ G  P WLSP Q +V  +  ++ EYAQ++ +         + D  ++ T+N KIR
Sbjct: 784 LAENYGGKWPFWLSPRQVMVVPVGPTSEEYAQQVCSEFFEAGFMSDVDLDQSCTLNKKIR 843

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              + +   I++ G+KE +  ++ +R   +    ++S+  AI  L K
Sbjct: 844 NAQLAQYNFILVVGEKEKANHAVNVRTRDNKVHGEISVSSAIEKLKK 890


>gi|319902630|ref|YP_004162358.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Bacteroides
           helcogenes P 36-108]
 gi|319417661|gb|ADV44772.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Bacteroides
           helcogenes P 36-108]
          Length = 646

 Score =  627 bits (1618), Expect = e-177,   Method: Composition-based stats.
 Identities = 254/649 (39%), Positives = 395/649 (60%), Gaps = 19/649 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+TFPD S++ +    TG  +AESIS  LA+  +A  +NG++ DL  P+ ++  + + 
Sbjct: 1   MIKITFPDSSVREYNEGVTGLQIAESISSRLAQDVLACGVNGEIYDLGRPIMQDAEVVLY 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
             ED +      H+ AH++AEA+Q ++P +Q  IGP IE+GFYYD D  E      +L  
Sbjct: 61  KWEDEQGKHAFWHTSAHLLAEALQELYPGIQFGIGPAIENGFYYDVDPGEATIKEADLPV 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEKKM E++AR    +++ ++   A ++F  + E YK E++  +    ++T Y QG + D
Sbjct: 121 IEKKMAELVARKEAVVRKDIAKADALKMFGGRGETYKCELISEL-EDGHITTYTQGAFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ +T  +K   KL  VAGAYWRG  +R M++RIYG  +  ++ L +YL  LEE+
Sbjct: 180 LCRGPHLMTTAPIK-AIKLTSVAGAYWRGQEDRKMMTRIYGITFPKKKMLDEYLVLLEEA 238

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           +KRDHRK+ +EMDLF  ++    G+  W  KG  +   L  ++RR + + DY+E+  P +
Sbjct: 239 KKRDHRKIGKEMDLFMFSDTVGKGLPMWLPKGTALRIRLQDFLRRIQARYDYQEVMCPPI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            ++ L+  SGH+  Y  + F       T ++   + LKPMNCP H  ++ +  +SY++LP
Sbjct: 299 GNKLLYITSGHYAKYGKDSFQ---PIHTPEEGEEYFLKPMNCPHHCMIYKNSPRSYKDLP 355

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +RLAEFG+V R E SG LHGL RVR FTQDDAH+FC  +Q+ +E L++ ++I  +++   
Sbjct: 356 LRLAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKDEFLRVMDIISIVFQSMD 415

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           FE    ++S R     +K +GSD  W+ AE  +    +      +  +   +  GE AFY
Sbjct: 416 FENFEAQISLRDKVNRDKYIGSDENWEKAEQAIIEACE------EKGLKARIEYGEAAFY 469

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDAIGR WQ GTIQVD+NLP RF   Y  + ++K  PVM+HRA FGS+ERF+
Sbjct: 470 GPKLDFMVKDAIGRRWQLGTIQVDYNLPERFQLEYTGADNQKHRPVMVHRAPFGSMERFV 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE+  G  PLWL+P Q  +  I+    +YAQE+   LK + +    D RNE I  KI
Sbjct: 530 AVLIEHTAGKFPLWLTPDQVAILPISEKFNDYAQEVKLFLKKYDIRAIVDERNEKIGRKI 589

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R++ +K+IP +++ G+KEA  + I +R+ G      + + +    +++E
Sbjct: 590 RDNEMKRIPYMLVVGEKEAENKEIAVRKQGEGDKGTMKIEEFAKKISEE 638


>gi|58584729|ref|YP_198302.1| threonyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of
           Brugia malayi]
 gi|73919844|sp|Q5GSG4|SYT_WOLTR RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|58419045|gb|AAW71060.1| Threonyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of
           Brugia malayi]
          Length = 632

 Score =  627 bits (1618), Expect = e-177,   Method: Composition-based stats.
 Identities = 308/646 (47%), Positives = 436/646 (67%), Gaps = 18/646 (2%)

Query: 4   DIKLTF-PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
            I++TF     ++ +    TG D+ +     ++K+A+A+ +NG++ DLS  +  +  I++
Sbjct: 1   MIRITFLAKQKVEEYSSRVTGFDILQ---PDISKEAIALRVNGELYDLSREIESDTEIDV 57

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           I   D   L +IRH  AHIMA+AV+ ++P  QV IGP I+DGFYYDF  +  F++D+LA 
Sbjct: 58  IQLNDEEGLDIIRHDAAHIMAQAVKELFPNAQVTIGPTIQDGFYYDFAIDHTFTTDDLAA 117

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEKKM+EII  +  F+++  + ++A   F S  E YKV+I+ SIP  E++T+YRQG++ D
Sbjct: 118 IEKKMKEIIKSNHRFIREVWARKQAINFFSSIGEKYKVDIISSIPESEDLTVYRQGDFVD 177

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH  ST +VK F KLMKVAGAYWRG+   PML RIYGTAW  + EL  YL  LEE+
Sbjct: 178 LCRGPHSPSTSRVKAF-KLMKVAGAYWRGNVKGPMLQRIYGTAWRNKDELNIYLKRLEEA 236

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVL 300
           +KRDHR++A++MDLFHI E+  G +FWH +G+ ++  L SY+R+K+  + Y E+ TP ++
Sbjct: 237 KKRDHRRIAKDMDLFHIQEEAVGQVFWHEQGYTLYNVLESYIRKKLINNGYAEVKTPILV 296

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            + LW++SGHWD +R NMF V        + +  A+KPMNCP HV +FN   +SYR LP+
Sbjct: 297 SKELWEKSGHWDKFRENMFIV-----DESESKKLAIKPMNCPCHVQIFNSYTRSYRNLPI 351

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AEFG  +RNE SGSLHGLMRVRGFTQDDAH+FC +EQ+ +E +K   L+  +Y + GF
Sbjct: 352 RMAEFGMCHRNESSGSLHGLMRVRGFTQDDAHIFCMEEQVNSETVKFCALLKEVYSELGF 411

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
            +I VK S RP  R G + +WD AE  +   +          ++  +  GEGAFYGPK E
Sbjct: 412 NEISVKFSDRPNVRAGDNEVWDRAEKALLEAVKEAG------LSYELNPGEGAFYGPKLE 465

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           +ILKDAIGR WQCGT+QVDF LP R  AFY+ +  +K HPVM+HRA+ G+ ERFIGI+IE
Sbjct: 466 FILKDAIGRSWQCGTLQVDFILPERLGAFYIGADGQKYHPVMLHRAILGTFERFIGILIE 525

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           ++ G  PLWL+P Q ++ T+T+ A  YA EI+N+LK   + ++TD  NE ++YKIR HS 
Sbjct: 526 HYAGKFPLWLAPTQLVILTVTNEADNYATEISNVLKEQGVRVKTDLTNEKVSYKIRLHSS 585

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
            K+PI+ I G  E + +++ +R  GS   +  S   A+ +L K+ L
Sbjct: 586 NKVPILWIVGKNEVASKTVSVRNLGSEKQESSSCEKAVKLLLKKVL 631


>gi|86134203|ref|ZP_01052785.1| Threonyl-tRNA synthetase [Polaribacter sp. MED152]
 gi|85821066|gb|EAQ42213.1| Threonyl-tRNA synthetase [Polaribacter sp. MED152]
          Length = 647

 Score =  627 bits (1618), Expect = e-177,   Method: Composition-based stats.
 Identities = 251/650 (38%), Positives = 386/650 (59%), Gaps = 19/650 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            IK+T PDGS+K F  ++T  DVA+SIS  LA+  ++ + NG   + + P++ +GS+ + 
Sbjct: 1   MIKITLPDGSVKEFEKNSTPFDVAKSISEGLARNIISASFNGTTLETTTPLKTDGSLVLY 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
           T  D        HS AH++AEA+ S  P  ++ IGP I++GFYYD D  ++  S  + + 
Sbjct: 61  TFNDDEGKKAFWHSSAHVLAEAILSFHPNAKLTIGPAIDNGFYYDLDLGDETISEKDFSA 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEKK  EI      F  + +S   A  L++++   YKVE++E++   + +T      + D
Sbjct: 121 IEKKFLEIARGKHEFKMREVSKADALSLYKAENNPYKVELIENLTDGD-ITFCDHSNFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG H+ +TG +K   K+M VAGAYWRGD     L+R+YG ++  Q+ LT+YL  LEE+
Sbjct: 180 LCRGGHIPNTGIIK-AIKIMNVAGAYWRGDEKNNQLTRVYGISFPKQKMLTEYLELLEEA 238

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           +KRDHRKL +E++LF  ++    G+  W  KG  + + L ++++  + K  YE + TP +
Sbjct: 239 KKRDHRKLGKELELFTFSQKVGAGLPLWLPKGAALRERLQNFLKAAQKKAGYEMVMTPHI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             + L+  SGH++ Y  + F    A  T K    F LKPMNCP H  V+N    SY++LP
Sbjct: 299 GQKELYVTSGHYEKYGEDSFQ---AIKTPKMDEEFLLKPMNCPHHCEVYNFKPYSYKDLP 355

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
            R AEFG+VYR E SG LHGL RVRGFTQDDAH+FCT EQ+  E  ++ +L++ ++   G
Sbjct: 356 KRFAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCTPEQLDQEFKEVIDLVLYVFGSLG 415

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           FE    ++S R  +     +G    W+ AEN +              ++  +  GE AFY
Sbjct: 416 FEDFTAQVSIRDMENLDKYIGDVETWEIAENAIISAAKD------KGLDYVIEEGEAAFY 469

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDA+GR WQ GTIQVD+NLP RF+  Y  S ++   PVMIHRA FGS+ERFI
Sbjct: 470 GPKLDFMVKDALGRSWQLGTIQVDYNLPKRFDLTYTGSDNQSHRPVMIHRAPFGSMERFI 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            +++E+  GN PLWL+P Q I+  I+    +Y +++   L++  +    D R+E    KI
Sbjct: 530 AVLLEHTGGNFPLWLTPEQVIILPISDKYQKYTEKVLESLENSEIRALVDDRSEKTGRKI 589

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           R+  + KIP ++I G+KE  + ++ +R+ G       ++ +   ++ +E 
Sbjct: 590 RDAEVSKIPFMVIVGEKEEQDGTVSVRKHGEGDIGTFTIEEFKSLIKEEE 639


>gi|325295461|ref|YP_004281975.1| threonyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM
           11699]
 gi|325065909|gb|ADY73916.1| threonyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM
           11699]
          Length = 658

 Score =  627 bits (1618), Expect = e-177,   Method: Composition-based stats.
 Identities = 265/663 (39%), Positives = 409/663 (61%), Gaps = 32/663 (4%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            I++  PDGS   F    +  ++A  I++SL K AV    NG++ D+  P+   G I+II
Sbjct: 1   MIEIELPDGSKLTFEGKTSVKEIAGKIAKSLEKNAVGAFFNGELIDIHTPIERSGKIKII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPE--VQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           T +DP SL V+RHS AHI+A+AV+ ++ +  V++ IGP   +GFYYDFD     S ++L+
Sbjct: 61  TQKDPESLEVLRHSVAHILAKAVKRVYGKDKVKLGIGPATNEGFYYDFDLPTSISEEDLS 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG-EW 179
           ++E +M++II     F ++ ++ E+A ELF+   + YK E+L+SI   E +T+Y  G ++
Sbjct: 121 KLEAEMEKIIKAKETFRREEITREQALELFK--DDPYKTELLDSISENEKITIYWLGEDF 178

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLC+GPH+   G VK F KL+ VAGAYWRGDS   ML RIYGTA+  ++EL +YL+ LE
Sbjct: 179 FDLCKGPHIEHAGMVKAF-KLLSVAGAYWRGDSKNKMLQRIYGTAFWKKKELEEYLHRLE 237

Query: 240 ESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
           E++KRDHR L +++DLF I E+ GSG++FWH  G  I + +  ++ ++ +   Y+ I TP
Sbjct: 238 EAKKRDHRVLGKQLDLFSIYEEAGSGLVFWHPNGAIIRREIEEWVEKEHEKRGYQRIYTP 297

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL----------------RTFALKPMNC 341
            ++   LW+ SGH+D Y+ NMF V   +   ++                   +A+KPMNC
Sbjct: 298 HIMKADLWKISGHYDFYKENMFFVPVVEHDEEEKLGNEKVPLTCEEVERANWYAVKPMNC 357

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
           PGH+ ++    +SY++LP+R  EFG+V+R E SGSLHGL+RVRGFTQDD H+FC  +Q+ 
Sbjct: 358 PGHILIYKSQPRSYKDLPLRFFEFGTVHRYEKSGSLHGLLRVRGFTQDDGHIFCRPDQLK 417

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
           +E L + + ++ +   F  + ++  + T+PEK +GSD  W+ A   +   L       + 
Sbjct: 418 DEILGVLDYVMELLSVFKLDYVIN-IGTKPEKYIGSDEAWEHATQALIDALK------ER 470

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
            +   ++ G+GAFYGPK +  + DAIGR W   TIQVDFNLP RF+  YV+   EK  PV
Sbjct: 471 GLEYNIVEGDGAFYGPKIDIAVLDAIGRKWDGPTIQVDFNLPERFDLTYVDRDGEKKRPV 530

Query: 522 MIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLS 581
           M+HRA+ GSIERFIG++IE++ G  PLWL+P Q +V  ++   + YA+ +   LK   + 
Sbjct: 531 MVHRAIMGSIERFIGLLIEHYAGLFPLWLAPTQVVVIPVSDKYINYAENVFRKLKEVGIR 590

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            + D  +  + YKIR+  + KIP ++I G+KE    ++ +R         + + + +  +
Sbjct: 591 AKLDDESGKVGYKIRKAELLKIPYMVIVGEKEQESNTVSVRSKKEGDLGSMEISNFLDKI 650

Query: 642 TKE 644
             E
Sbjct: 651 LTE 653


>gi|242024338|ref|XP_002432585.1| Threonyl-tRNA synthetase, cytoplasmic, putative [Pediculus humanus
           corporis]
 gi|212518045|gb|EEB19847.1| Threonyl-tRNA synthetase, cytoplasmic, putative [Pediculus humanus
           corporis]
          Length = 717

 Score =  627 bits (1618), Expect = e-177,   Method: Composition-based stats.
 Identities = 239/647 (36%), Positives = 369/647 (57%), Gaps = 22/647 (3%)

Query: 2   PSDIKLTFPDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
            + IK+T PDG I        +  D+A+ IS+ LA   V   +NG + DL  P+  +  +
Sbjct: 75  SNPIKITLPDGKIVEGESWKTSPYDIAKGISQGLADNTVIAKVNGVLWDLERPLESDCKL 134

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDE 118
           +++  +D  +  V  HS AHI+ EA++ ++    +  GP IE+GFYYD    +   S+ +
Sbjct: 135 QLLKFDDEEAQQVFWHSTAHILGEALERLYGGH-LCYGPPIENGFYYDMFTPDSQVSNTD 193

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
              IE  M++I+    PF +  +  E   E+F+     +KV IL         T+Y+ G 
Sbjct: 194 FPSIESLMKKIVKEKQPFERLEMKKEDLLEMFKYNH--FKVRILNEKINTPTTTVYKCGS 251

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLCRGPHVR+TG++K F K+ K + AYW G+S    L R+YG ++   ++L ++    
Sbjct: 252 LIDLCRGPHVRNTGKIKAF-KITKNSSAYWEGNSEAESLQRVYGISFPDPKQLKEWERIQ 310

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
           EE+ KRDHRKL RE +L+   E   G  F++ KG  I+ TL+ ++R + +   ++E+ TP
Sbjct: 311 EEAAKRDHRKLGREQELYFFHELSPGSCFFYPKGAFIYNTLVEFIRSEYRKRGFQEVITP 370

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  LW+ SGHW  Y  NMF+ +       +  T+ALKPMNCPGH  +F++  +S+RE
Sbjct: 371 NIYNVKLWETSGHWQHYAENMFSFEL------EKETYALKPMNCPGHCLIFDNRNRSWRE 424

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+A+FG ++RNE SG+L GL RVR F QDDAH+FCT  Q+ +E       + ++Y  
Sbjct: 425 LPLRMADFGVLHRNEFSGALSGLTRVRRFQQDDAHIFCTVNQIKSEISGALEFLKNVYGV 484

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF   + +LSTRPEK +G   +WD AE  +   LD      +      +  G+GAFYGP
Sbjct: 485 FGFTFQL-RLSTRPEKYLGEINVWDQAEKQLTESLDEFGFPWK------LNPGDGAFYGP 537

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  + DA+ R  QC TIQ+DF LP RFN  Y+    +K  PV+IHRA+ GS+ER I I
Sbjct: 538 KIDITILDALKRAHQCATIQLDFQLPIRFNLNYIGESGDKIRPVIIHRAILGSVERMIAI 597

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIR 596
           + E++ G  P WLSP Q+IV  +     EYA+++ + + +   S + D    +T+N KIR
Sbjct: 598 LTESYGGKWPFWLSPRQSIVIPVGLPFYEYAKKVKDDIFNAGFSCDFDDDEGDTMNKKIR 657

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              + +   I + G+KE +  ++ +R   +    + S+ D I    +
Sbjct: 658 NAQLAQYNFIFVVGEKEKNAGTVNVRTRDNIVHGEFSVGDVIKKFQE 704


>gi|220931402|ref|YP_002508310.1| Threonyl-tRNA synthetase [Halothermothrix orenii H 168]
 gi|219992712|gb|ACL69315.1| Threonyl-tRNA synthetase [Halothermothrix orenii H 168]
          Length = 646

 Score =  627 bits (1618), Expect = e-177,   Method: Composition-based stats.
 Identities = 250/650 (38%), Positives = 388/650 (59%), Gaps = 19/650 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
             IK+T PDGS++ +    T  +VA SI + L + AVA  ++ K+ DL   +  +  I I
Sbjct: 2   EKIKVTLPDGSVREYDPGVTIEEVAYSIGKGLGRAAVAGNVDDKLVDLDTTLVNDARISI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +T +    L + RH+ AHI+A+AV+ ++  V++ IGP IE+GFYYDFD E+ FS  +L +
Sbjct: 62  VTIDSEEGLDIYRHTTAHILAQAVKRLYKNVKLGIGPTIENGFYYDFDVEESFSPSDLEK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK+M++II  D P  K+ +S ++A +L + K E YKVE++E +   + V+LY QGE+ D
Sbjct: 122 IEKEMEKIIKEDLPIKKEMVSRDEALKLMKEKGEIYKVELIEEL-EDDYVSLYHQGEFID 180

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ STG+VK F KL+  AGAYWRGD N  ML RIYGTA+  +++L ++L  LEE+
Sbjct: 181 LCRGPHLPSTGKVKAF-KLLNAAGAYWRGDENNKMLQRIYGTAFQKKKQLEEHLKMLEEA 239

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQV 299
           +KRDH KL RE+DLF   E  G G+     KG K+ Q L  ++   + K  Y+   TP +
Sbjct: 240 KKRDHNKLGRELDLFMTEESIGQGLPLLKPKGAKVVQILQRFVEDEEEKRGYQLTKTPYM 299

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHWD Y+ +MF +    D  KD    AL+PM CP    ++N  L+SYR+LP
Sbjct: 300 AKSDLYKISGHWDHYKEDMFIL---GDEEKDDEVLALRPMTCPFQFMIYNSKLRSYRDLP 356

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R +E  +++RNE SG +HGL+RVR FT  + H+ CT EQ+  E   + NLI  + +  G
Sbjct: 357 LRYSETSTLFRNEASGEMHGLIRVRQFTISEGHIICTPEQLEEEFRGVVNLINYMMETLG 416

Query: 420 FEKIMVKL-----STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            E  +            EK + +   W+++++ MK +LD +       I+     GE AF
Sbjct: 417 IEDDIWYRFSKWDPDNREKYIDNPTAWEESQDKMKNILDKLN------IDYVEAEGEAAF 470

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +   ++  G++    T+Q+DF LP RF+  Y++  ++K  P +IHR   G  ER 
Sbjct: 471 YGPKLDIQFRNVHGKEDTIITVQIDFALPERFDMTYIDKDNKKKRPYVIHRTSVGCYERT 530

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
           + ++IE + G  P WL+P+Q  +  ++   V+YA E+  +LK   + +E D  NE + YK
Sbjct: 531 LAMLIEKYAGAFPTWLAPVQVEIIPVSDDQVDYAYEVKGILKEAGIRVEVDDTNEKLGYK 590

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IR+  ++KIP ++I G++E   R++ +R         +S+ +    + +E
Sbjct: 591 IRQAQMEKIPYMLIVGNREVENRTVSVRDRKEGDLGAISIKEFKEKIVRE 640


>gi|42520791|ref|NP_966706.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           melanogaster]
 gi|73919843|sp|Q73GH6|SYT_WOLPM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|42410531|gb|AAS14640.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           melanogaster]
          Length = 633

 Score =  627 bits (1618), Expect = e-177,   Method: Composition-based stats.
 Identities = 311/643 (48%), Positives = 437/643 (67%), Gaps = 18/643 (2%)

Query: 4   DIKLTF-PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
            +++TF  +  +K +    TG D+ +       K+ VA+ +NG++ DLS  +  +  IE+
Sbjct: 1   MVRVTFSTEQKVKEYSGKVTGFDILQ---PDALKEVVALKVNGELYDLSREIEADAEIEV 57

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           I   D   L +IRH  AHIMA+AV+ ++P  Q+ IGP I+DGFYYDF  ++ F++D+L  
Sbjct: 58  IQLSDEVGLDIIRHDAAHIMAQAVKELFPNTQITIGPTIQDGFYYDFATDRTFTTDDLTA 117

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEKKM+EI+  +  F+++  + +++ + F    E YKV+I+ SIP  EN+T+YRQG++ D
Sbjct: 118 IEKKMKEIVKSNHRFVREVWTRKQSVDFFSGIGEKYKVDIISSIPEGENLTVYRQGDFVD 177

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH  STG+VK F KLMKVAGAYWRGDS  PML RIYGTAW  + EL  YL  L+E+
Sbjct: 178 LCRGPHSPSTGRVKAF-KLMKVAGAYWRGDSKGPMLQRIYGTAWGNKDELNAYLECLKEA 236

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVL 300
           EKRDHRK+A++MDLFHI E+  G +FWH +G+ ++  L SY+R+K+  + Y E+ TP ++
Sbjct: 237 EKRDHRKIAKDMDLFHIQEEAVGQVFWHEQGYILYNVLESYIRKKLINNGYFEVKTPILV 296

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            + LW++SGHWD +R NMF V        + +  A+KPMNCP HV +FN   +SYR+LP+
Sbjct: 297 SKELWERSGHWDKFRENMFIV-----DESENKKLAIKPMNCPCHVQIFNSHTRSYRDLPI 351

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AEFG+ +RNE SGSLHGLMRVRGFTQDDAH+FC +EQ+ +E +K  +L+  +Y + GF
Sbjct: 352 RMAEFGTCHRNESSGSLHGLMRVRGFTQDDAHIFCMEEQVNSETIKFCDLLKEVYSELGF 411

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
            +I VK S RP+ R G+D +WD AE  +   +          ++  +  GEGAFYGPK E
Sbjct: 412 NEISVKFSDRPDIRAGNDEVWDRAEKALLEAVKEAG------LSYKLNPGEGAFYGPKLE 465

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           ++LKDAIGR+WQCGT+QVDF LP R  AFY+ +   K HPVM+HRA+ G+ ERFIGI+IE
Sbjct: 466 FVLKDAIGRNWQCGTLQVDFILPERLGAFYIGADGHKHHPVMLHRAILGTFERFIGILIE 525

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           N+ G  P+WL+P Q  + TIT+ A  YA EI+N+LK   + ++TD  NE I+YKIR HS 
Sbjct: 526 NYAGKFPVWLAPTQLAILTITNEADGYATEISNILKEQGVRVKTDLTNEKISYKIRLHSS 585

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            K+PI+ I G  E + +++ +R  GS   +  SL  A   L K
Sbjct: 586 NKVPILWIVGKNEVTSKTVSVRNLGSERQESFSLEKANESLLK 628


>gi|188994826|ref|YP_001929078.1| threonyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277]
 gi|238691475|sp|B2RJD6|SYT_PORG3 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|188594506|dbj|BAG33481.1| threonyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277]
          Length = 653

 Score =  627 bits (1617), Expect = e-177,   Method: Composition-based stats.
 Identities = 254/650 (39%), Positives = 395/650 (60%), Gaps = 20/650 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+TFPDG+ + +    TG D+A SIS  L +  +A  +NG+V DL  P+  +  +++ 
Sbjct: 1   MIKITFPDGNFREYEAGITGWDIAGSISPRLQQDVLAAGVNGQVWDLHRPINEDAEVKLF 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFS--SDELA 120
             +D        HS AH+MAEA++ ++P ++  IGP IE+GFYYD D  +  S    +L 
Sbjct: 61  KWDDAEGKHAFWHSSAHLMAEALEELYPGIKFGIGPAIENGFYYDVDPGEGISIKDADLP 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEK+MQ++ AR    +++ ++   A  +F  K + YKVE++  + A   +T Y QG + 
Sbjct: 121 AIEKRMQDLAARKETIIRRDIAKADALRMFGDKDDQYKVELISEL-ADGTITTYTQGGFT 179

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ +TG +K   KL+ VAGAYWRGD  R  L+RIYG ++  ++ L +YL  LEE
Sbjct: 180 DLCRGPHLPNTGYIK-AIKLLSVAGAYWRGDEKRKQLTRIYGISFPKKKMLDEYLELLEE 238

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           ++KRDHRK+ +E++LF  +++   G+  W  +G ++   L  ++++ +    Y+++ TP 
Sbjct: 239 AKKRDHRKIGKELELFAFSQNVGAGLPLWLPRGTQLRLRLEDFLKQIQKHFGYQQVITPH 298

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           + +++L+  SGH+  Y  + F      +T ++   F LKPMNCP H  +F     SYR+L
Sbjct: 299 IGNKNLYITSGHYAKYGQDSFR---PINTPQEGEEFMLKPMNCPHHCEIFKITPHSYRDL 355

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFG+VYR E SG LHGL RVRGFTQDDAH+FC  +Q+  E  K+ ++I  I+K  
Sbjct: 356 PIRLAEFGTVYRYEQSGELHGLTRVRGFTQDDAHLFCRPDQLKEEFCKVMDIIFIIFKAL 415

Query: 419 GFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            F+    ++S R     EK +GS+  W+ AE  +    +      +  +   +  GE AF
Sbjct: 416 DFKNFEAQISLRDKVNREKYIGSEENWERAERAIIEACE------EKGLPAVIEYGEAAF 469

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK ++++KDA+GR WQ GTIQVD+NLP RF+  Y    ++K  PVMIHRA FGS+ERF
Sbjct: 470 YGPKLDFMVKDALGRRWQLGTIQVDYNLPERFDLEYTGEDNKKHRPVMIHRAPFGSMERF 529

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
           + ++IE+  G  PLWL+P Q +V  ++    EYA  +A  L    + ++ D RNE +  K
Sbjct: 530 VAVLIEHTAGKFPLWLTPDQVVVLPVSERFNEYAHRVAKELNQRDIRVQVDDRNEKVGRK 589

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IR++ +K+IP ++I G+ E+ E  + +R+ G      + +     ++ KE
Sbjct: 590 IRDNELKRIPYMLIVGENESREEEVSVRKQGEGDMGIMKITTFAELIEKE 639


>gi|189501972|ref|YP_001957689.1| threonyl-tRNA synthetase [Candidatus Amoebophilus asiaticus 5a2]
 gi|189497413|gb|ACE05960.1| hypothetical protein Aasi_0559 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 644

 Score =  627 bits (1617), Expect = e-177,   Method: Composition-based stats.
 Identities = 251/648 (38%), Positives = 394/648 (60%), Gaps = 19/648 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           + +  PDG+IK+F    T  ++A+SIS  L+++ +A  +NG+V D++ P+  + +++++T
Sbjct: 6   VNIALPDGTIKSFAKGVTSLEIAQSISERLSQQILASLVNGEVWDITRPITEDAAVKLLT 65

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQI 122
            +D        HS AH+MAEA++S++P +++ IGP I +GFYYD D  +  F +  L +I
Sbjct: 66  WQDEDGKKAFWHSSAHLMAEALESLYPGIKLGIGPAIANGFYYDIDFGDYDFDATHLPRI 125

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E+KM E+  +++ +    ++   A   F+ K + YKVE+LE +    ++T Y+ G + DL
Sbjct: 126 EEKMLELARQNNLYQGIVVNKPAAISFFQKKGDPYKVELLEGL-QDGSITFYKHGNFTDL 184

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+  TG +K   KL+ ++GAYWRG+     L+RIYG  +  Q+EL  YL  LEE++
Sbjct: 185 CRGPHIPHTGFIK-AVKLLNISGAYWRGNEKNKQLTRIYGITFPQQKELKAYLELLEEAQ 243

Query: 243 KRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           KR+H+K+ +E+ LF  +E    G+  W  +G  + + L  ++RR ++K  Y+ + TP + 
Sbjct: 244 KRNHQKIGKELKLFTFSEKVGIGLPLWLPRGTVLREQLEQFLRRAQVKAGYQPVVTPHIG 303

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            + L+  SGH+D Y  + F       T  +   F LKPMNCP H  ++ H  +SYR+LPV
Sbjct: 304 HKELYMTSGHYDKYGEDSFQ---PIRTPHEGEEFFLKPMNCPHHCEIYKHEPRSYRDLPV 360

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLAEFG+VYR E  G LHGL+R RGFTQDDAH+FC  +Q+  E  K+ +L+  ++   GF
Sbjct: 361 RLAEFGTVYRYEQHGELHGLVRTRGFTQDDAHIFCRNDQVREEFAKVIDLVTYVFSALGF 420

Query: 421 EKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
                +LS R      K +G    WD AE  ++ V          ++NT   LGE AFYG
Sbjct: 421 SDYTARLSFRDPEQLHKYIGDQEDWDKAEEAIEEVAKL------RKLNTTKALGEAAFYG 474

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK ++++KDA+GR+WQ GT+Q+D+ LP RF+  Y  + ++K  PVMIHRA FGS+ERFI 
Sbjct: 475 PKLDFMVKDALGRNWQLGTVQLDYQLPVRFDLSYTGADNKKHRPVMIHRAPFGSLERFIA 534

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           I++E+  G LPLWL+P Q  +  I+     YA+E+   L++  +    D R+E I  KIR
Sbjct: 535 ILLEHTAGKLPLWLAPEQVAILPISEKFAAYAEEVNQNLRNKDIRCFIDHRDEKIGKKIR 594

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           E  + KIP + I G+KE  ER++ +R+ G+       +   +  + ++
Sbjct: 595 EAELSKIPYMFIIGEKEQLERTVSVRKQGAGDQGSFPIDKLVQEIVED 642


>gi|224090286|ref|XP_002193839.1| PREDICTED: threonyl-tRNA synthetase [Taeniopygia guttata]
          Length = 711

 Score =  627 bits (1616), Expect = e-177,   Method: Composition-based stats.
 Identities = 246/648 (37%), Positives = 359/648 (55%), Gaps = 23/648 (3%)

Query: 2   PSDIKLTFPDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
              IK+T PDG   +      T   +A  IS+ LA   V   +N  V DL  P+  + S+
Sbjct: 68  SKTIKVTLPDGKQVDAESWKTTPYQIACGISQGLADNTVIAKVNKVVWDLDRPLEEDCSL 127

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQP-FSSDE 118
           E++  ED  + AV  HS AHIM EA++ I+    +  GP IE+GFYYD   E+   SS++
Sbjct: 128 ELLKFEDEEAQAVYWHSSAHIMGEAMERIYGGC-LCYGPPIENGFYYDMFLEEGGVSSND 186

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
            + +E   ++I+     F +  +  E   E+F+     +K  IL         T+YR G 
Sbjct: 187 FSALETLCKKIMKEKQAFERLEVKKETLLEMFKY--NKFKCRILNEKVNTPTTTVYRCGP 244

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLCRGPHVR TG++K   K+ K +  YW G ++   L RIYG ++   + L ++  F 
Sbjct: 245 LIDLCRGPHVRHTGKIKTI-KIHKNSSTYWEGKADMESLQRIYGISFPDTKMLKEWEKFQ 303

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
           EE++ RDHRK+ R+ +LF   E   G  F+  KG  I+ TLI ++R + +   ++E+ TP
Sbjct: 304 EEAKSRDHRKIGRDQELFFFHELSPGSCFFLPKGAYIYNTLIEFIRSEYRKRGFQEVVTP 363

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            V +  LW  SGHW  Y  NMF+ +       +   FALKPMNCPGH  +F+H  +S+RE
Sbjct: 364 NVFNSKLWMTSGHWQHYSDNMFSFEV------EKEIFALKPMNCPGHCLMFDHRPRSWRE 417

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+RLA+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+  E       + ++Y  
Sbjct: 418 LPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEEEIKSCLGFLRTVYDV 477

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF   +  LSTRPEK +G   +W+ AE  ++  L+      +      +  G+GAFYGP
Sbjct: 478 FGFSFKLN-LSTRPEKYLGDIEVWNQAEKQLENSLNAFGEKWE------LNPGDGAFYGP 530

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC-HPVMIHRAVFGSIERFIG 536
           K +  +KDAIGR  QC TIQ+DF LP RFN  +V+        PV+IHRA+ GS+ER I 
Sbjct: 531 KIDIQIKDAIGRYHQCATIQLDFQLPVRFNLTFVSHDGNDKTRPVIIHRAILGSVERMIA 590

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FRNETINYKI 595
           I+ EN+ G  PLWLSP Q +V  +  +  EYAQ++           + D     T+N KI
Sbjct: 591 ILTENYGGKWPLWLSPQQVMVVPVGPACDEYAQKVRQHFHDAGFMADVDVDPGCTLNKKI 650

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           R   I +   I++ G+KE +  ++ IR   +    + ++ D +  L +
Sbjct: 651 RNAQIAQYNFILVVGEKEKASGTVNIRTRDNKVHGERTIADTVERLLQ 698


>gi|330995385|ref|ZP_08319295.1| threonine--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
 gi|329575880|gb|EGG57404.1| threonine--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
          Length = 647

 Score =  627 bits (1616), Expect = e-177,   Method: Composition-based stats.
 Identities = 247/650 (38%), Positives = 386/650 (59%), Gaps = 20/650 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+TFPDGS++ +    TG  +AESIS  LA+  +A  +NG+  +L+ P+  + S+ + 
Sbjct: 1   MIKITFPDGSVREYEAGVTGLQIAESISSRLAQDVLACGVNGETVELNRPINEDASVMLY 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE--QPFSSDELA 120
             ED        H+ AH+MAEA+Q ++P +Q  IGP IE+GFYYD            + A
Sbjct: 61  KWEDAEGKHAFWHTSAHLMAEAMQELYPGMQFGIGPAIENGFYYDVMPPAGTVIRESDFA 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEKKM E+  R  P ++  +S   A + F  + + YK E++E +    +++ Y QG + 
Sbjct: 121 GIEKKMLELAQRKEPVVRAEISKAGALKFFGERGQTYKNELIEDL-EDGHISTYTQGAFT 179

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ +TG +K   K+  V+ AYWRGD  RP ++R+Y  ++  ++ L +YL  LEE
Sbjct: 180 DLCRGPHLMNTGVIK-AVKVTAVSSAYWRGDEKRPQMTRVYAISFPKKKMLDEYLTLLEE 238

Query: 241 SEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           ++KRDHRK+ +EM+LF  +   G G+  W  KG  +   L  ++++ + +  Y+++ TP 
Sbjct: 239 AKKRDHRKIGKEMELFMFSERVGKGLPMWLPKGTALRLRLEDFLKKIQKRYGYQQVMTPH 298

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +  ++L+  SGH+  Y  + F       T +    + LKPMNCP H  ++    +SY++L
Sbjct: 299 IGGKNLYVTSGHYAHYGKDSFQ---PIHTPEADEEYMLKPMNCPHHCEIYAWKPRSYKDL 355

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG+VYR E SG LHGL RVR FTQDDAH+FC  +Q+ +E +++  +I  I+   
Sbjct: 356 PLRIAEFGTVYRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKDEFIRVMEIIQIIFGAL 415

Query: 419 GFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            F+    ++S R        +GSD +W++AEN +      I+   +  +N  V  GE AF
Sbjct: 416 NFDTFEAQISLRDPNNREKYIGSDEVWEEAENAI------IEACKEKGLNAKVEYGEAAF 469

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK ++++KDA+GR WQ GTIQVD+NLP RF   Y    ++K  PVMIHRA FGS+ERF
Sbjct: 470 YGPKLDFMVKDALGRRWQLGTIQVDYNLPERFKLEYTGEDNQKHRPVMIHRAPFGSMERF 529

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             ++IE+  G+ PLWL+P Q  +  I+    +YA ++        +    D RNE I  K
Sbjct: 530 CAVLIEHTAGHFPLWLTPDQVAILPISEKFNDYAHKLCAYFDERDVRAIVDDRNEKIGRK 589

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IR++ +K+IP ++I G+KEA++ ++ +R+ G      +   D    + +E
Sbjct: 590 IRDNEMKRIPYMLIVGEKEAADGTVSVRKQGEGDQGSMKFEDFAKKINEE 639


>gi|257791654|ref|YP_003182260.1| threonyl-tRNA synthetase [Eggerthella lenta DSM 2243]
 gi|257475551|gb|ACV55871.1| threonyl-tRNA synthetase [Eggerthella lenta DSM 2243]
          Length = 637

 Score =  627 bits (1616), Expect = e-177,   Method: Composition-based stats.
 Identities = 273/647 (42%), Positives = 405/647 (62%), Gaps = 15/647 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           + +  PDGS K     +T +DVA SI   LAK A+A  +N +  DLS PV EG S+ I+T
Sbjct: 1   MNIVLPDGSNKGLADGSTVADVAASIGAGLAKAALAGIVNDQPVDLSAPVAEGDSVAIVT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +    L ++RHS AH+MA A+  ++ +VQ  +GP IEDGFYYD   ++  S D+ A IE
Sbjct: 61  AKSDEGLELLRHSTAHVMAAALVDLYGDVQFGVGPAIEDGFYYDVKLDRALSPDDFAAIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M EI+  D  F ++ ++  +A E+     + +K+E++  +P    +T Y  G++ DLC
Sbjct: 121 ARMAEIVKADEAFERRVVTRAEAEEI--FASQPFKLELIAELPEDAVITTYTIGKFTDLC 178

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG++  F KL K+AGAYWRGD+ R ML+RIYGTA+  Q+EL ++L  LEE+EK
Sbjct: 179 RGPHLPSTGKLGAF-KLTKLAGAYWRGDAEREMLTRIYGTAFFKQKELDEHLRNLEEAEK 237

Query: 244 RDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLD 301
           RDHRKL RE+ ++ +      G+  +  KG ++ +T+  ++RR   +  YEE+ TP V +
Sbjct: 238 RDHRKLGRELGIYTMDPLAGVGLPMYLPKGARVIRTMQEWLRRDLYERGYEEVITPHVYN 297

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLR--TFALKPMNCPGHVAVFNHGLKSYRELP 359
             +W+ SGH+  Y+ NM+     + T +D R   +A+KPMNCPGHV ++   L SYR+LP
Sbjct: 298 ADVWKTSGHYGFYKENMYFFNINEGTDEDPRLTEYAVKPMNCPGHVMLYKSELHSYRDLP 357

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R  EFG+VYR+E SG +HGL+R RGFTQDDAHVFCT++Q+ +E + I +L+  I   FG
Sbjct: 358 LRYFEFGTVYRHEMSGVVHGLLRARGFTQDDAHVFCTRDQVVDEVVAILDLVDHIMSTFG 417

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F+    ++STRPEK +G+D +W+ A N +K         ++  +   +  G+GAFYGPK 
Sbjct: 418 FQYEA-EISTRPEKSIGTDDMWEHATNALKEA------CARHELAYDINEGDGAFYGPKI 470

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +  +KDAIGR WQC T+QVDFN+P RF   Y    + +  P M+HRA+FGSIERF+GI+I
Sbjct: 471 DIKVKDAIGRTWQCSTVQVDFNMPERFELTYRTEDNTEERPWMLHRAIFGSIERFLGILI 530

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E++ G LPLWL+P+Q  V  +     E A E+A  LK+    IE   +NE +  KI +  
Sbjct: 531 EHYAGALPLWLAPVQVAVLPLADRHNEAAAELAKQLKAAGGRIEVYDQNEPMRVKIAKAQ 590

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
            +KIP +++ GDKE    ++ +R           +   +  L + +L
Sbjct: 591 SQKIPYMVVLGDKEIENGTVSVRERHEGDLGAWPVEQLVEKLREAAL 637


>gi|326803832|ref|YP_004321650.1| threonine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
 gi|326651446|gb|AEA01629.1| threonine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
          Length = 651

 Score =  626 bits (1615), Expect = e-177,   Method: Composition-based stats.
 Identities = 251/656 (38%), Positives = 400/656 (60%), Gaps = 28/656 (4%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            I+LTFPD S+K F    +G DVA+SIS SLAK+ VA  +N ++  L + +  +GSI +I
Sbjct: 1   MIQLTFPDQSVKEFEAGVSGRDVAKSISNSLAKRVVAYTLNDELKGLDEAIESDGSIRLI 60

Query: 63  TPEDPR----SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ--PFSS 116
            P++      +L ++RHS AH++A+A++ ++P+++  +GP IE+GFYYD D  Q    S 
Sbjct: 61  DPKNKETEQEALDILRHSSAHLLAQALRRLYPDIKFGVGPAIENGFYYDTDNGQGQQVSE 120

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
           ++L ++E +M++I+  D P + + +S E+A+E+F+   + YK+EI+  +P    +T Y Q
Sbjct: 121 EDLPRVEAEMEKIVKEDYPVVGKEVSREEAKEIFK--NDPYKLEIIADLPEDATLTTYSQ 178

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           GE+ DLCRG HV STG +K F KL+ +AGAYWRG+S+  M+ R+YGT++  +++L + L 
Sbjct: 179 GEFTDLCRGGHVPSTGYIKHF-KLLSLAGAYWRGNSDNAMMQRVYGTSYFNEKDLKEDLK 237

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEI 294
             EE+++RDHRK+ +E+DLF I      G+ FW   G  I + +  Y+  ++++  Y+ +
Sbjct: 238 RREEAKERDHRKIGKELDLFMIDPKTGQGLPFWLPNGATIRRQVERYIVDKEVQAGYQHV 297

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
            TP + D  L++ SGHWD Y  +MF     +    D  +F L+PMNCP H+ V+ + + S
Sbjct: 298 YTPIMADVDLYKTSGHWDHYSDDMFPTMDFE----DGESFVLRPMNCPHHIRVYQNKVHS 353

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YRELP+R+AE G ++R E SG+L GL RVR  T +D+H+F   +Q+ +E   I   +   
Sbjct: 354 YRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDSHIFVRLDQIKDEFKSILRFMQDA 413

Query: 415 YKDFGFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
           Y DF       +LS R  K        D +W+ A++++K  +D +       ++     G
Sbjct: 414 YHDFNITDYRYRLSYRDPKDTKKYFDDDEMWEKAQSMLKEAMDELG------LDYFEAEG 467

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK-CHPVMIHRAVFG 529
           E AFYGPK +  +K A+G +    TIQ+DF LP +F+  YV    +    PVMIHR +  
Sbjct: 468 EAAFYGPKLDVQVKTALGNEETLSTIQLDFLLPEKFDVTYVGEDGQNTHRPVMIHRGIVS 527

Query: 530 SIERFIGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRN 588
           ++ERF+  +IE +KG  P WL+P QAI+  +  +   +Y  ++AN ++S  L IE D RN
Sbjct: 528 TMERFVAYLIEEYKGAFPTWLAPQQAILIPVNENQHADYVYQVANRMRSEGLRIEVDDRN 587

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           E + YKIRE   +K+P  ++ GD E    ++ +RR+GS  T+ V L + I ++  E
Sbjct: 588 EKMGYKIREAQTRKVPYQLVFGDNEIENGTVTVRRYGSKKTETVDLDEFINMIHAE 643


>gi|158299584|ref|XP_319682.4| AGAP008929-PA [Anopheles gambiae str. PEST]
 gi|157013587|gb|EAA14818.5| AGAP008929-PA [Anopheles gambiae str. PEST]
          Length = 761

 Score =  626 bits (1615), Expect = e-177,   Method: Composition-based stats.
 Identities = 243/646 (37%), Positives = 370/646 (57%), Gaps = 22/646 (3%)

Query: 3   SDIKLTFPDGS-IKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIE 60
           + IK+T PDG  +       T  DVA  IS+ LA   V   +N ++ DL  P+  +  ++
Sbjct: 121 TPIKVTLPDGKQVDGLSWQTTPYDVARGISQGLADNTVIARVNNELWDLDRPLEGDCKLQ 180

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQP-FSSDEL 119
           ++  +DP + AV  HS AHI+ EA++  +    +  GP I++GFYYD   E    S+ + 
Sbjct: 181 LLKFDDPDAQAVFWHSSAHILGEAMEKRYGGH-LCYGPPIDNGFYYDMFLEGSGISNQDY 239

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             +E +++ I+    PF +  +       +FE  +  +KV IL      E  T+YR G  
Sbjct: 240 GALESEVKRIVKEKQPFERLEMKKADLLRMFEYNQ--FKVRILNEKVTTETTTVYRCGPL 297

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHVR+TG+VK   K++K +  YW G ++   L R+YG ++   ++L ++    E
Sbjct: 298 IDLCRGPHVRNTGKVK-ALKVVKNSATYWEGKADAETLQRVYGISFPDPKQLKEWEKIQE 356

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+ KRDHRKL +E +LF   E   G  F+  KG  I+ TL+ ++R + +   ++E+ +P 
Sbjct: 357 EAAKRDHRKLGKEQELFFFHELSPGSCFFQPKGAHIYNTLMGFIRSEYRKRGFQEVISPN 416

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           + +  LWQ SGHW  Y  NMF+ +       +  TFALKPMNCPGH  +F+H  +S+REL
Sbjct: 417 IYNAKLWQTSGHWQHYAENMFSFE------SEKETFALKPMNCPGHCLMFDHRNRSWREL 470

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+A+FG ++RNE SG+L GL RVR F QDDAH+FC  +Q+  E     + +  +Y  F
Sbjct: 471 PLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCMPDQIREEITGCLDFLRHVYTIF 530

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF   +V LSTRPEK +G   +W++AE  +   LD      ++        G+GAFYGPK
Sbjct: 531 GFTFNLV-LSTRPEKYLGEIEVWNEAEKALADSLDKFGEPWKE------NPGDGAFYGPK 583

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +  + DA+ R+ QC TIQ+DF LP RFN  Y++   EK  PV+IHRAV GS+ER I I+
Sbjct: 584 IDITIMDALKRNHQCATIQLDFQLPIRFNLNYIDDSGEKKRPVIIHRAVLGSVERMIAIL 643

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIRE 597
            EN+ G  P WLSP Q +V  +  +  +YA ++   L      +E D    +T+N KIR 
Sbjct: 644 TENYAGKWPFWLSPRQVMVVPVGPAYDDYADQVRQRLHEAGFMVEADLDAGDTMNKKIRN 703

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             + +   I++ G+KE S  ++ +R   +    +V++ D +  L+K
Sbjct: 704 AQLAQFNFILVVGEKERSSETVNVRTRDNKVHGEVTVNDLVTKLSK 749


>gi|294782476|ref|ZP_06747802.1| threonine--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
 gi|294481117|gb|EFG28892.1| threonine--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
          Length = 637

 Score =  626 bits (1615), Expect = e-177,   Method: Composition-based stats.
 Identities = 288/639 (45%), Positives = 405/639 (63%), Gaps = 17/639 (2%)

Query: 11  DGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRS 69
           +G  K +  +    ++A+ IS SLAKK+V   ++GK  D+S  +  +  +E I  + P  
Sbjct: 6   NGENKEYDSNINMFEIAKGISNSLAKKSVGAKVDGKNVDMSYVLDHDAEVEFIDIDSPEG 65

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
             ++RHS AH+MA+AV  ++PE +V IGP+IE+GFYYDFD  + F+ ++L +IE +M+ I
Sbjct: 66  EDIVRHSTAHLMAQAVLRLYPETKVTIGPVIENGFYYDFDPVEQFTEEDLEKIEAEMKRI 125

Query: 130 IARDSPFLKQYLSHEKARELFES-KKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           +  +    K  L  ++A + F    K  YKVEI+E IP  E V+ Y+QG++ DLCRG HV
Sbjct: 126 VKENIKLEKYVLPRDEAIDYFRDVDKNKYKVEIVEGIPQGEQVSFYKQGDFTDLCRGTHV 185

Query: 189 RSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRK 248
            STG +K F KL  VAGAYWRG+S   ML RIYG +++ +  L ++L F+EE+EKRDHRK
Sbjct: 186 PSTGYLKAF-KLRTVAGAYWRGNSKNKMLQRIYGYSFSNEDRLKKHLKFMEEAEKRDHRK 244

Query: 249 LAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQ 307
           L +E++LF I+E G G  F+  KG      LI   R++ +   Y ++ TP +L++ LW+ 
Sbjct: 245 LGKELELFFISEYGPGFPFFLPKGMVFRNVLIDLWRKEHEKAGYLQLETPIMLNKELWEI 304

Query: 308 SGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGS 367
           SGHW +YR NM+  +       D   FA+KPMNCPG V  F H L SY++LP RLAE G 
Sbjct: 305 SGHWFNYRENMYTSEI------DELEFAIKPMNCPGGVLSFKHQLHSYKDLPARLAELGK 358

Query: 368 VYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKL 427
           V+R+E SG+LHGLMRVR FTQDD+H+F T +Q+ +E + + NLI   Y      +  ++L
Sbjct: 359 VHRHEFSGALHGLMRVRSFTQDDSHIFMTPDQVQDEIIGVVNLIDKFYSKLFGFEYEIEL 418

Query: 428 STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAI 487
           ST+PEK +GS  +WD AE+ + G LD +           +  G+GAFYGPK ++ +KDAI
Sbjct: 419 STKPEKAIGSQEIWDMAESALAGALDKLGR------KYKINPGDGAFYGPKLDFKIKDAI 472

Query: 488 GRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           GR WQCGTIQ+DFNLP RF+  Y+    EK  PVM+HR ++GSIERFIGI+IE++ G  P
Sbjct: 473 GRMWQCGTIQLDFNLPERFDVTYIGEDGEKHRPVMLHRVIYGSIERFIGILIEHYAGAFP 532

Query: 548 LWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH-SIKKIPII 606
           +WL+P+Q  V T+    + YA+EI   L+   +  E D RNETI YKIRE     KIP+ 
Sbjct: 533 MWLAPVQVKVLTLNDECIPYAKEIMAKLQELGIRAELDDRNETIGYKIREANGRYKIPMQ 592

Query: 607 IICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           +I G  E   + + IRRFGS      SL D    +  E+
Sbjct: 593 LIIGKNEVENKEVNIRRFGSKDQFPKSLDDFYEYVVDEA 631


>gi|195147146|ref|XP_002014541.1| GL19239 [Drosophila persimilis]
 gi|198473694|ref|XP_001356405.2| GA18821 [Drosophila pseudoobscura pseudoobscura]
 gi|194106494|gb|EDW28537.1| GL19239 [Drosophila persimilis]
 gi|198138068|gb|EAL33469.2| GA18821 [Drosophila pseudoobscura pseudoobscura]
          Length = 754

 Score =  626 bits (1615), Expect = e-177,   Method: Composition-based stats.
 Identities = 242/646 (37%), Positives = 364/646 (56%), Gaps = 22/646 (3%)

Query: 3   SDIKLTFPDGS-IKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIE 60
             IK+T PDG  +       T  DVA  IS+ LA   +   +NG+V DL   + E  S++
Sbjct: 114 ETIKVTLPDGKQVDAISWETTPYDVARGISQGLADNTIISKVNGQVWDLDRVLEENCSLQ 173

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDEL 119
           ++  +DP + AV  HS AHIM EA++ I+    +  GP IE GFYYD   E +  S+++ 
Sbjct: 174 LLKFDDPEAQAVFWHSSAHIMGEAMERIYGGH-LCYGPPIESGFYYDMHLEGEGISTNDY 232

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             +E  +++I+     F +  +      E+F+     +K+ IL      +  T+Y+ G  
Sbjct: 233 GTMESLVKQIVKEKQNFERLEMKKADLLEMFKY--NEFKLRILNEKVTTDRTTVYKCGSL 290

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHVR TG+VK   K+ K +  YW G ++   L R+YG ++   ++L ++    E
Sbjct: 291 IDLCRGPHVRHTGKVK-ALKITKNSSTYWEGKADAETLQRVYGISFPDPKQLKEWEKLQE 349

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+ KRDHRK+ RE +LF   E   G  F+  +G  I+ TL+ +++ + +   ++E+ +P 
Sbjct: 350 EAAKRDHRKIGREQELFFFHELSPGSCFFQPRGAHIYNTLMGFIKSEYRKRGFQEVISPN 409

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           + +  LW  SGHW  Y  NMF+ +       +   FALKPMNCPGH  +F+   +S+REL
Sbjct: 410 IYNAKLWMTSGHWQHYAENMFSFE------AEKEKFALKPMNCPGHCLIFDTRNRSWREL 463

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+A+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E       +  +Y  F
Sbjct: 464 PLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAPEQIKSEMKGCLEFLKHVYTIF 523

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF   +V LSTRPEK +G    W+DAE  ++  L+      ++        G+GAFYGPK
Sbjct: 524 GFTFQLV-LSTRPEKYLGELEQWNDAEKALEESLNEFGMPWKE------NPGDGAFYGPK 576

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +  + DA+ R  QC TIQ+DF LP RFN  Y+    EK  PV+IHRA+ GS+ER I I+
Sbjct: 577 IDITIMDALKRAHQCATIQLDFQLPIRFNLNYIADDGEKKRPVIIHRAILGSVERMIAIL 636

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FRNETINYKIRE 597
            EN+ G  P WLSP Q +V  +  +  +YAQ + + L +     E D    +T+N KIR 
Sbjct: 637 TENYAGKWPFWLSPRQVMVVPVGPAYDQYAQTVKDQLHAAGFMSEADCDAGDTMNKKIRN 696

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             + +   I++ GDKE S  ++ +R   +    +VS+ + I  L K
Sbjct: 697 AQLAQFNFILVVGDKERSSNTVNVRTRDNKVHGEVSVSELITKLQK 742


>gi|194765983|ref|XP_001965104.1| GF21565 [Drosophila ananassae]
 gi|190617714|gb|EDV33238.1| GF21565 [Drosophila ananassae]
          Length = 749

 Score =  626 bits (1615), Expect = e-177,   Method: Composition-based stats.
 Identities = 243/644 (37%), Positives = 364/644 (56%), Gaps = 22/644 (3%)

Query: 5   IKLTFPDGS-IKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           IK+T PDG  +       T  +VA  IS+ LA   V   +NG+V DL   +    +++++
Sbjct: 111 IKVTLPDGKQVDATSWETTPYEVARGISQGLADNTVISKVNGEVWDLDRVLEGNCTLQLL 170

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQ 121
             +DP + AV  HS AHIM EA++ I+    +  GP IE+GFYYD   E +  S+++   
Sbjct: 171 KFDDPEAQAVFWHSSAHIMGEAMERIYGGH-LCYGPPIENGFYYDMHLEGEGISTNDYGT 229

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +E  +++I+     F +  +      E+F+     +KV IL      +  T+Y+ G   D
Sbjct: 230 MESLVKQIVKEKQNFERLEMKKSDLLEMFKY--NEFKVRILNEKVTTDRTTVYKCGSLID 287

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHVR TG+VK   K+ K +  YW G ++   L R+YG ++   ++L ++    EE+
Sbjct: 288 LCRGPHVRHTGKVK-ALKITKNSSTYWEGKADAETLQRVYGISFPDPKQLKEWEKLQEEA 346

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVL 300
            KRDHRK+ RE +LF   E   G  F+  +G  I+ TL+ +M+ + +   ++E+ +P + 
Sbjct: 347 AKRDHRKIGREQELFFFHELSPGSCFFQPRGAHIYNTLMDFMKAEYRKRGFQEVISPNIY 406

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  LW  SGHW  Y  NMF+ +       +   FALKPMNCPGH  +F++  +S+RELP+
Sbjct: 407 NAKLWMTSGHWQHYAENMFSFEV------EKEKFALKPMNCPGHCLIFDNRNRSWRELPL 460

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+A+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E       +  +Y  FGF
Sbjct: 461 RMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAPEQIKSEMKGCLEFLKHVYTIFGF 520

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
              +V LSTRPEK +G    W+DAE  +   L+      ++        G+GAFYGPK +
Sbjct: 521 SFQLV-LSTRPEKYLGELEQWNDAEKALAESLNEFGMPWKE------NPGDGAFYGPKID 573

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
             + DA+ R  QC TIQ+DF LP RFN  Y+    EK  PV+IHRA+ GS+ER I I+ E
Sbjct: 574 ITIMDALKRAHQCATIQLDFQLPIRFNLSYIADDGEKKRPVIIHRAILGSVERMIAILTE 633

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FRNETINYKIREHS 599
           NF G  P WLSP Q +V  +  +  +YAQ + + L +     E D    +T+N KIR   
Sbjct: 634 NFAGKWPFWLSPRQVMVVPVGPAYDQYAQSVRDQLHAAGFMSEADCDAGDTMNKKIRNAQ 693

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           + +   I++ GDKE S  ++ +R   +    +VS+ + I  L K
Sbjct: 694 LAQFNFILVVGDKERSSNTVNVRTRDNKVHGEVSVAELITKLQK 737


>gi|189345705|ref|YP_001942234.1| threonyl-tRNA synthetase [Chlorobium limicola DSM 245]
 gi|238692169|sp|B3EEC1|SYT_CHLL2 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|189339852|gb|ACD89255.1| threonyl-tRNA synthetase [Chlorobium limicola DSM 245]
          Length = 657

 Score =  626 bits (1615), Expect = e-177,   Method: Composition-based stats.
 Identities = 262/651 (40%), Positives = 394/651 (60%), Gaps = 16/651 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           + I +T PDG++KN P  +TG D+A SI + LA  A+AV INGK  DL  PV  + +IEI
Sbjct: 9   ASIAITLPDGTVKNVPSGSTGFDIALSIGKRLADDALAVTINGKPTDLHAPVLCDANIEI 68

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +T +      +  H+ +HIMA+A++ I+P  +   GP  E GFYYD   E  F  ++L  
Sbjct: 69  VTFDSQLGRDIFWHTASHIMAQAIEEIFPGSRFGAGPATEQGFYYDVASEHRFREEDLRA 128

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFES-KKEAYKVEILES-IPAKENVTLYRQGEW 179
           IE+KM EI  R+    ++ +    A   F S + + YKVEILE  +   + V+LY QG++
Sbjct: 129 IEQKMLEIAKRNIMLQREEMKRVDAIAYFTSVRNDPYKVEILEDTLKHVDTVSLYHQGDF 188

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLC GPH+ ST ++K    L  ++ +YWRGDS+R  + RIYG A+ + + L +++   E
Sbjct: 189 ADLCTGPHLPSTSRLK-AVLLSNISSSYWRGDSSRENMQRIYGIAFPSDKLLKEHIARQE 247

Query: 240 ESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
           E+++RDHRKL  E++LF ++ + GSG+  W  KG  I   L ++++ + +   Y  + TP
Sbjct: 248 EAKRRDHRKLGTELELFMLSPEIGSGLPVWLPKGAVIRSELETFLKEEQRKRGYLPVYTP 307

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  L+++SGH+  Y  + F      D       + LKPMNCP H  +++  L+SYR+
Sbjct: 308 HIGNIELYKRSGHYPYYSDSQFPPLTYHDEDGKQEQYLLKPMNCPHHHLIYSSKLRSYRD 367

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+RL EFG+VYR+E SG L+GL+R RGFTQDD+H++CT EQ+ +E     +L   ++  
Sbjct: 368 LPIRLTEFGTVYRHEQSGELNGLVRARGFTQDDSHIYCTPEQLVDEICNAIDLTQFVFGT 427

Query: 418 FGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
            GF ++  +LS       +K  G+  +W+ AE  ++   D +       I+  + +GE +
Sbjct: 428 LGFSEVQTRLSMHDPANQQKYGGTAEIWEQAEKDVREAADRMG------IDYFIGVGEAS 481

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK ++I++DA+GR WQ GT+QVD+ +P RF+  Y+ S  +K  PV+IHRA FGS+ER
Sbjct: 482 FYGPKIDFIVRDALGRKWQLGTVQVDYVMPERFDLSYIGSDGQKHRPVVIHRAPFGSMER 541

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           FIG++IE+  GN PLWL+P+QA+V  I     +YA+ I   L +  + +E D RNE I  
Sbjct: 542 FIGVLIEHTAGNFPLWLAPVQAVVLPIAEEVHDYAKTIHTALLAAGIRVEIDTRNEKIGR 601

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIRE  I KIP +II G KE     I +RR  S      ++   I IL KE
Sbjct: 602 KIREAEIGKIPCMIIVGQKERDSGEISLRRHRSGDMGSFTVPGLIDILKKE 652


>gi|319954103|ref|YP_004165370.1| ser-tRNA(thr) hydrolase ;threonyl-tRNA synthetase [Cellulophaga
           algicola DSM 14237]
 gi|319422763|gb|ADV49872.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Cellulophaga
           algicola DSM 14237]
          Length = 646

 Score =  626 bits (1614), Expect = e-177,   Method: Composition-based stats.
 Identities = 258/649 (39%), Positives = 390/649 (60%), Gaps = 19/649 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+T PDGSI+     +T  DVA+SIS   A+  ++   N  V +++ P+  +GS+ + 
Sbjct: 1   MIKITLPDGSIRECEKGSTPMDVAKSISEGFARNVISAKFNDTVLEVTTPLLEDGSLVLY 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
           +  D        HS +H++A+A++ ++P V++ IGP I++GFYYD D  +   S  +   
Sbjct: 61  SWNDAAGKKAFWHSSSHVVAQAIEELYPGVKLTIGPAIDNGFYYDIDLGDTSISDKDFPA 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEKK  EI      F    +S   A + ++ +   YKVE++E++     +T      + D
Sbjct: 121 IEKKAIEIARGKHNFKMHPVSKAAALQKYKEQGNEYKVELIENL-EDGTITFCDHDTFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG H+ +TG +K   K++ VAGAYWRGD N+P L+RIYG ++  Q+ELT+YL  LE++
Sbjct: 180 LCRGGHIPNTGIIK-AIKILSVAGAYWRGDENKPQLTRIYGISFPKQKELTEYLELLEQA 238

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           ++RDHRKL +E++LF  +     G+  W  KG  + + L  ++++ + K  YE + TP +
Sbjct: 239 KQRDHRKLGKELELFTFSAKVGQGLPLWLPKGAALRERLEDFLKKAQKKAGYEMVITPHI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             + L+  SGH+  Y A+ F       T K    F LKPMNCP H  V+N    SY++LP
Sbjct: 299 GQKELYVTSGHYAKYGADSFQ---PIKTPKMDEEFLLKPMNCPHHCEVYNFKPHSYKDLP 355

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
            R AEFG+VYR E SG LHGL RVRGFTQDDAH+FCT +Q+  E   + +L + +    G
Sbjct: 356 KRFAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCTPDQLDEEFKNVIDLSLYVLGSLG 415

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           F+    ++S R    PEK +GS   W+ AE+ +      I  +++  +N  +  GE AFY
Sbjct: 416 FDNFTAQVSVRDLTKPEKYIGSVENWEKAESAI------INAATEKGLNFVIESGEAAFY 469

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDA+GR WQ GTIQVD+NLP RF+  Y  S +E   PVMIHRA FGS+ERFI
Sbjct: 470 GPKLDFMVKDALGRQWQLGTIQVDYNLPERFDLTYKGSDNELHRPVMIHRAPFGSMERFI 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            +++E+  GN PLWL P QAI+  ++    +YA+++   L+ H +    D RNET+  KI
Sbjct: 530 ALLLEHTGGNFPLWLIPEQAIILPVSEKHEKYAEKVLKSLEKHEIRALVDKRNETVGKKI 589

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           RE  + K+P ++I G+ E +E +I +RR G      +++ D   ++T E
Sbjct: 590 REAEMNKLPFMLIVGENEEAEETISVRRHGGEDLGSITISDFNELVTTE 638


>gi|295397484|ref|ZP_06807567.1| threonine--tRNA ligase [Aerococcus viridans ATCC 11563]
 gi|294974284|gb|EFG50028.1| threonine--tRNA ligase [Aerococcus viridans ATCC 11563]
          Length = 656

 Score =  626 bits (1614), Expect = e-177,   Method: Composition-based stats.
 Identities = 252/651 (38%), Positives = 398/651 (61%), Gaps = 22/651 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           + I L FPDG+ K+F    TG DVA SIS SLAK+A+A  I+G++ DL+ P+ EG +IEI
Sbjct: 14  NMIDLVFPDGAKKSFEAGVTGRDVAASISNSLAKRALAAKIDGELVDLNAPINEGGAIEI 73

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           + P+   +L ++RHS AH+MA+A++ ++P ++  +GP IE G+YYD D+E+  + ++L  
Sbjct: 74  VDPKHEDALGILRHSTAHLMAQAMKRLYPGIKFGVGPAIETGYYYDTDQEKQITEEDLPV 133

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE +M +I+  + P  ++ ++  +A E+     + YK+EI+  +P  E +T+Y QGE+ D
Sbjct: 134 IEAEMAKIVKENYPIERREVTRAEANEI--FADDEYKLEIIADLPEDETLTVYSQGEFTD 191

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG HV STG +K+F KL+ VAGAYWRG+S+  M+ R+YGTA+  +++L +++   EE+
Sbjct: 192 LCRGIHVPSTGYIKEF-KLLSVAGAYWRGNSDNKMMQRVYGTAFFEKRDLKEFIKQREEA 250

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+D+F +  + GSG+ FW  KG  I + +  Y+  +++   YE + TP +
Sbjct: 251 KERDHRKLGKELDIFMVNPEVGSGLPFWLPKGATIRRIIERYIIDKEVSLGYEHVYTPIM 310

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            D  L++ SGHWD Y  +MF          D     L+PMNCP H+ V+ + + SYRE P
Sbjct: 311 ADVELYKTSGHWDHYHEDMFPPMDMG----DGEQLVLRPMNCPHHMMVYKNDIHSYREFP 366

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           VR+AE G ++R E SG+L GL RVR  T +DAH+F   +Q+  E  ++  LI  +Y DF 
Sbjct: 367 VRIAELGMMHRYEKSGALSGLQRVREMTLNDAHIFVRPDQIKEEFTRVIELIKQVYDDFN 426

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R           D +W+ A+ ++K  +D +       +     +GE AFY
Sbjct: 427 ITDYRFRLSYRDPNNTDKYFDDDEMWEKAQAMLKEAMDDLG------LEYFEAIGEAAFY 480

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK-CHPVMIHRAVFGSIERF 534
           GPK +  +K A+G +    T+Q+DF LP RF+  YV    +    PV+IHR V  ++ERF
Sbjct: 481 GPKLDVQMKTALGNEETMSTVQLDFLLPERFDLTYVGQDGQDTHRPVVIHRGVVSTMERF 540

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINY 593
           +  +IE +KG  P WL+P+QA +  +      E+ +EI   +K+  + +E D RNE + Y
Sbjct: 541 VAYLIEEYKGAFPTWLAPVQAKLIPVNDEAHGEHVEEIRRRMKAAGMRVEVDNRNEKMGY 600

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIRE   +KIP  ++ GD E +E ++ +RR+GS  T  +   + +  L ++
Sbjct: 601 KIREAQTQKIPYQLVFGDNEIAENTVTVRRYGSKETLSMPFDEFLAQLEQD 651


>gi|237740439|ref|ZP_04570920.1| threonyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
 gi|229422456|gb|EEO37503.1| threonyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
          Length = 637

 Score =  626 bits (1614), Expect = e-177,   Method: Composition-based stats.
 Identities = 287/639 (44%), Positives = 406/639 (63%), Gaps = 17/639 (2%)

Query: 11  DGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRS 69
           +G  K +  +    ++A+ IS SLAKK+V   ++GK  D+S  +  +  +E I  + P  
Sbjct: 6   NGENKEYDSNINMFEIAKGISNSLAKKSVGAKVDGKNIDMSYVLDHDAEVEFIDIDSPEG 65

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
             ++RHS AH+MA+AV  ++PE +V IGP+IE+GFYYDFD  + F+ ++L +IE +M+ I
Sbjct: 66  EDIVRHSTAHLMAQAVLRLYPETKVTIGPVIENGFYYDFDPVEQFTEEDLEKIEAEMKRI 125

Query: 130 IARDSPFLKQYLSHEKARELFES-KKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           +  +    K  L  ++A + F    K  YKVEI+E IP  E V+ Y+QG++ DLCRG HV
Sbjct: 126 VKENIKLEKYVLPRDEAIDYFRDVDKNKYKVEIVEGIPQGEQVSFYKQGDFTDLCRGTHV 185

Query: 189 RSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRK 248
            STG +K F KL  VAGAYWRG+S   ML RIYG +++ +  L ++L F+EE+EKRDHRK
Sbjct: 186 PSTGYLKAF-KLRTVAGAYWRGNSKNKMLQRIYGYSFSNEDRLKKHLKFMEEAEKRDHRK 244

Query: 249 LAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQ 307
           L ++++LF I+E G G  F+  KG      LI   R++ +   Y ++ TP +L++ LW+ 
Sbjct: 245 LGKDLELFFISEYGPGFPFFLPKGMVFRNVLIDLWRKEHEKAGYLQLETPIMLNKELWEI 304

Query: 308 SGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGS 367
           SGHW +YR NM+  +       D   FA+KPMNCPG V  F H L SY++LP RLAE G 
Sbjct: 305 SGHWFNYRENMYTSEI------DELEFAIKPMNCPGGVLSFKHQLHSYKDLPARLAELGK 358

Query: 368 VYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKL 427
           V+R+E SG+LHGLMRVR FTQDD+H+F T +Q+ +E + + NLI   Y      +  ++L
Sbjct: 359 VHRHEFSGALHGLMRVRSFTQDDSHIFMTPDQVQDEIIGVVNLIDRFYSKLFGFEYEIEL 418

Query: 428 STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAI 487
           ST+PEK +GS  +WD AE+ + G LD +           +  G+GAFYGPK ++ +KDAI
Sbjct: 419 STKPEKAIGSQEIWDMAESALAGALDKLGR------KYKINPGDGAFYGPKLDFKIKDAI 472

Query: 488 GRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           GR WQCGTIQ+DFNLP RF+  Y+    EK  PVM+HR ++GSIERFIGI+IE++ G  P
Sbjct: 473 GRMWQCGTIQLDFNLPERFDVTYIGEDGEKHRPVMLHRVIYGSIERFIGILIEHYAGAFP 532

Query: 548 LWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH-SIKKIPII 606
           +WL+P+Q  V T+    + YA+EI + L+   +  E D RNETI YKIRE     KIP+ 
Sbjct: 533 MWLAPVQVKVLTLNDECIPYAKEIMDKLQELGIRAELDDRNETIGYKIREANGRYKIPMQ 592

Query: 607 IICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           +I G  E   + + IRRFGS      SL D    +  E+
Sbjct: 593 LIIGKNEVENKEVNIRRFGSKDQFSKSLDDFYDYVVDEA 631


>gi|300778181|ref|ZP_07088039.1| threonine--tRNA ligase [Chryseobacterium gleum ATCC 35910]
 gi|300503691|gb|EFK34831.1| threonine--tRNA ligase [Chryseobacterium gleum ATCC 35910]
          Length = 639

 Score =  626 bits (1614), Expect = e-177,   Method: Composition-based stats.
 Identities = 260/650 (40%), Positives = 391/650 (60%), Gaps = 21/650 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEII 62
            IK+T PD S+K F    T  DVA+SIS  LA+  ++  +N K  + + P+   S ++++
Sbjct: 1   MIKITLPDNSVKEFEGAVTPLDVAKSISEGLARNTISAIVNDKQVETTTPITTDSTVQLL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
           T  D        HS AH++A+A+   +P+ ++ IGP IE GFYYD D  ++  S  +  +
Sbjct: 61  TWNDDLGKKAFWHSSAHLLAQAILEFYPDAKLTIGPAIESGFYYDVDFGDESLSEKDFEK 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEKK+ E   + S F    +S E+A + +      YKVE++ ++   E +T      + D
Sbjct: 121 IEKKILENAKKGSTFSLYPVSKEEALKTYA--DNPYKVELISNLNDGE-ITFVTHDNFTD 177

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG H+ +TG VK   K++  AGAYWRG+   P L+R+YG ++  Q++LT+YL  LEE+
Sbjct: 178 LCRGGHIPNTGIVK-AVKILNAAGAYWRGNEKNPQLTRVYGISFPKQKDLTEYLERLEEA 236

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+ +F  +E    G+  W  KG  + + L +++   + K  YE + +P +
Sbjct: 237 KRRDHRKLGKELGIFAFSEKVGAGLPLWLPKGTALRRKLENFLSDAQKKGGYEFVMSPHI 296

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             + L+  SGHWD Y  + F       T  +   F LKPMNCP H  ++     SYR+LP
Sbjct: 297 GAKELYVTSGHWDKYGEDSFQ---PIKTPNEGEEFLLKPMNCPHHCEIYKTSQWSYRDLP 353

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
            R AEFG+VYR E SG LHGL RVRGFTQDDAH+FCT +Q+  E  K+ +L + ++K  G
Sbjct: 354 KRYAEFGTVYRYEQSGELHGLTRVRGFTQDDAHLFCTPDQLSEEFEKVIDLTLYVFKSLG 413

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           FE  + ++S R  +     +GSD  W+ AE+ +    +      +  + T +  GE AFY
Sbjct: 414 FEDFVTQVSLRDPENKQKYIGSDENWEKAESAIINAAE------KKGLKTVIEYGEAAFY 467

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDA+GR WQ GTIQVD+NLP RF+  Y+ S +EK  PVMIHRA FGS+ERFI
Sbjct: 468 GPKLDFMVKDALGRKWQLGTIQVDYNLPERFDLHYIGSDNEKHRPVMIHRAPFGSMERFI 527

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            I++EN  G+ PLWLSP Q I+  I+   V+Y+++++  L++H +S + D RNE    KI
Sbjct: 528 AILLENTAGDFPLWLSPDQFIILPISEKYVDYSKKVSQFLENHDISGQIDDRNEKTGKKI 587

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           R+  +KKIP +++ G+ E  E +I +RR G      + L D +    KE+
Sbjct: 588 RDAELKKIPFMLVVGENEEKEGTISVRRRGEGDLGVMKLEDFVAYFKKEA 637


>gi|123965897|ref|YP_001010978.1| threonyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515]
 gi|166225479|sp|A2BVR0|SYT_PROM5 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|123200263|gb|ABM71871.1| Threonyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515]
          Length = 638

 Score =  626 bits (1613), Expect = e-177,   Method: Composition-based stats.
 Identities = 296/644 (45%), Positives = 431/644 (66%), Gaps = 18/644 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP   K+T PDG+ K F    T  D+A+SI   LAK  +A  +N  + D + P++ +  +
Sbjct: 1   MP---KITLPDGTKKVFEKAVTTLDIAKSIGAGLAKATIAGKVNNVLFDATLPIKNDSKV 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT  D   + +IRHS AH++  AV+ I+P +++AIGP+IEDGFYYD   E  F+ ++L
Sbjct: 58  VIITSRDKEGIEIIRHSFAHLIGHAVKQIYPNIKMAIGPVIEDGFYYDIFSEYRFTPEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IE+++ ++I +D       +S ++A + F+ + E +K+ I+E I  K+++ LY+  E+
Sbjct: 118 IKIEERINQLIRKDYDVEVLQVSKQEAIKTFKERDEIFKLRIIEEIDEKDSINLYKHEEY 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            D+CRGPHV +T  ++ F KL+K++G+YWRGDS    L RIYGTAW+ +++LT YL  +E
Sbjct: 178 IDMCRGPHVPNTRHLRHF-KLLKLSGSYWRGDSKNESLQRIYGTAWSKEKDLTNYLKRIE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+EKRDHRKL ++  LFHI E+  G+IFWH  GW I+Q L  Y+R  ++ ++Y EI TPQ
Sbjct: 237 EAEKRDHRKLGKKHSLFHIQEESPGMIFWHPNGWIIYQILEKYIREILRKNEYLEIKTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
            +D+ LW++SGHW+ +R +MF       T  + RT+A+KPMNCP H+ VFN GLKSY++L
Sbjct: 297 AVDKSLWEKSGHWEKFRDDMFT------TASENRTYAIKPMNCPCHIQVFNQGLKSYKDL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFGS +RNEPSG+LHGLMRVR FTQDDAH+FCT+EQ+  E     +L+  +Y  F
Sbjct: 351 PLRLAEFGSCHRNEPSGALHGLMRVRNFTQDDAHIFCTEEQIQEEVSTFIDLVFEVYNTF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF++I++KLSTRPEKRVGS+ +WD +E  +   L+         +   +  GEGAFYGPK
Sbjct: 411 GFDEIIIKLSTRPEKRVGSEDIWDKSEEALTEALN------NKNLKWELQPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD + R WQCGTIQVDF++P R +A +V+ ++EK  PVM+HRA+ GS ERFIGI+
Sbjct: 465 IEFSLKDCLNRIWQCGTIQVDFSMPVRLDATFVDINNEKKSPVMLHRAILGSFERFIGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE ++   P+WL+P Q I+ +IT   ++   E  NLL +     + D RNE I YKIRE 
Sbjct: 525 IEQYEAKFPIWLAPTQIILLSITERNIKKCIEFNNLLNTKGYRSKIDIRNEKIGYKIRES 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           ++ +IP+I I GDKE    S+ +R    +      L +   ++ 
Sbjct: 585 TLARIPLIGIVGDKEQELNSVTLRALDGSNLGIYELDNLFKLMN 628


>gi|325954887|ref|YP_004238547.1| threonyl-tRNA synthetase [Weeksella virosa DSM 16922]
 gi|323437505|gb|ADX67969.1| threonyl-tRNA synthetase [Weeksella virosa DSM 16922]
          Length = 640

 Score =  626 bits (1613), Expect = e-177,   Method: Composition-based stats.
 Identities = 256/649 (39%), Positives = 384/649 (59%), Gaps = 21/649 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEII 62
            I +T PDGS+K +P   T  +VA+SIS  LA+  ++  +N K  +++ P+ E  +++++
Sbjct: 1   MINITLPDGSVKQYPQKVTPLEVAKSISEGLARNVLSALVNDKQTEITTPITENATLQLL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
           T  D        HS AH++A+A+   +P  ++ IGP IE GFYYD D  E  F   +  +
Sbjct: 61  TWNDDLGKKAFWHSSAHLLAQAILQFYPNAKLTIGPAIEKGFYYDVDFGEDSFGEKDFEK 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK M E   + + F    +S  +A E  E K   YK E++ ++   + +T      + D
Sbjct: 121 IEKAMLENAKKKAEFKLYSVSKAEALE--EYKNNEYKTELISNLEDGD-ITFCVHDNFTD 177

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG H+ +TG VK   K++ VAGAYWRGD    ML+R+YG  +  Q++LT+YL  LEE+
Sbjct: 178 LCRGGHLPNTGFVKAA-KILNVAGAYWRGDEKNKMLTRVYGITFPKQKDLTEYLELLEEA 236

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQV 299
           +KRDHRKL +E+ LF  +E    G+  W  KG  + + L +++ ++ +   YE + TP +
Sbjct: 237 KKRDHRKLGKELGLFAFSEKVGQGLPLWLPKGAALRRKLENFLLKQQQKLGYEMVITPHI 296

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             + L+  SGH+  Y A+ F       T  +   F LKPMNCP H  ++     SYR+LP
Sbjct: 297 GQKELYVTSGHYAKYGADSFQ---PIQTPNEGEEFLLKPMNCPHHCEIYKTSQWSYRDLP 353

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
            R AEFG+VYR E SG LHGL RVRGFTQDDAH+FCT +Q+  E  K+ +L++ +++  G
Sbjct: 354 KRYAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCTSDQLLEEFKKVIDLVLFVFESLG 413

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           F+    ++S R        +G+D  W+ AEN +      I  + +  + T V  GE AFY
Sbjct: 414 FDNYSAQISLRDPNNKEKYIGTDENWEKAENAI------ITAAKEKNLPTVVEHGEAAFY 467

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDA+GR WQ GTIQVD+NLP RF   Y+   ++   PVMIHRA FGS+ERFI
Sbjct: 468 GPKLDFMVKDALGRQWQLGTIQVDYNLPERFELSYIGPDNQAHRPVMIHRAPFGSMERFI 527

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            I++EN  GNLPLWL+P    +  I+   VE+ +++ NLL    ++   D RNE    KI
Sbjct: 528 AILLENTAGNLPLWLTPDVFTILPISEKYVEFGEKVLNLLAEQEINGLIDNRNEKTGKKI 587

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R+  +KKIP ++I G+KE    ++ +R+ G     ++ + + I  + KE
Sbjct: 588 RDAEVKKIPYMLIVGEKEEENGTVSVRKHGEGDLGEMKIEEFIQFVKKE 636


>gi|288801328|ref|ZP_06406782.1| threonine--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039]
 gi|288331711|gb|EFC70195.1| threonine--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039]
          Length = 654

 Score =  626 bits (1613), Expect = e-177,   Method: Composition-based stats.
 Identities = 247/650 (38%), Positives = 393/650 (60%), Gaps = 19/650 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            +K+TFPDGS++ +    TG  +AESIS +LA+  V+  +NG+  +L+ P+  + +I + 
Sbjct: 1   MVKITFPDGSVREYEAGVTGLQIAESISPALARDVVSCGVNGETTELNMPINSDATIALY 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ--PFSSDELA 120
             +DP       HS AH++AEA+Q ++P +Q   GP IE+GF+YD   +     S ++  
Sbjct: 61  KFDDPEGKKTFWHSSAHLLAEALQELYPGIQFGFGPAIENGFFYDVMTKDGVSISENDFP 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IE+KM+E+  ++ P +++ +S   A + F +  + YK E ++       ++ Y QG + 
Sbjct: 121 KIEEKMRELAKKNEPIVRKDISKADALKEFSADGQEYKCEHIDLDLEDGTISTYTQGAFT 180

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ STG +K   KL  VAGA+WRGD+ +  ++RIYG  +  ++ L +YL  +EE
Sbjct: 181 DLCRGPHLMSTGAIK-AIKLTSVAGAFWRGDAEKDQMTRIYGITFPKKKMLDEYLLMIEE 239

Query: 241 SEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++KRDHRK+ +EM+LF  +   G G+  W  KG ++   L   +R+  K   Y+E+  P 
Sbjct: 240 AKKRDHRKIGKEMELFMFSDRVGKGMPIWLPKGTELRLRLQDMLRKIQKRFGYQEVMCPV 299

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +  ++L+  SGH+  Y  + F       T ++   + LKPMNCP H  VF    +SY++L
Sbjct: 300 LGGKNLYVTSGHYAHYSKDAFR---PITTPEEGEEYMLKPMNCPHHCEVFAWKPRSYKDL 356

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R++EFG+VYR E SG LHGL RVR FTQDDAH+FC  EQ+ NE L++ ++I ++ K F
Sbjct: 357 PLRISEFGNVYRYEKSGELHGLTRVRAFTQDDAHIFCRPEQVKNEFLRVMDIIQAVLKIF 416

Query: 419 GFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            F+    ++S R        +GSD  W +AE  +         +++  +      GE AF
Sbjct: 417 DFKNFEAQISLRDPNNKEKYIGSDEAWHEAEQAIIDACKEKGLTAKSEL------GEAAF 470

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK ++++KDAIGR WQ GTIQVD+NLP RF   Y +  ++K  PVMIHRA FGS+ERF
Sbjct: 471 YGPKLDFMIKDAIGRRWQLGTIQVDYNLPQRFKLEYTDEDNQKKTPVMIHRAPFGSLERF 530

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             ++IE+  G+ PLWL+P Q  +  I+    +YA+E+A    ++ +    D RNE I  K
Sbjct: 531 TAVLIEHTAGHFPLWLTPDQVAILPISEKYNDYAREVARFFDNNGVRATIDDRNEKIGRK 590

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IR++ +K++P ++I G+KE++E  + +R+ G      ++  + +  +  E
Sbjct: 591 IRDNELKRVPYMVIVGEKESAEGLVSMRKQGGGEQATMTQQEFVDRVNGE 640


>gi|163756231|ref|ZP_02163346.1| uracil phosphoribosyltransferase [Kordia algicida OT-1]
 gi|161323843|gb|EDP95177.1| uracil phosphoribosyltransferase [Kordia algicida OT-1]
          Length = 647

 Score =  626 bits (1613), Expect = e-177,   Method: Composition-based stats.
 Identities = 249/649 (38%), Positives = 391/649 (60%), Gaps = 20/649 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+T PDGS++ F    T  DVA++IS   A+  ++   NG   + + P+  +GS+ + 
Sbjct: 1   MIKITLPDGSVREFDSSVTPMDVAKNISEGFARNVISANFNGVTVETTTPLTEDGSLILY 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
           T +D        HS AHI+A+A+  ++P+ ++ +GP I++GFYYD D  ++  +  +   
Sbjct: 61  TWKDDEGKKAFWHSSAHILAQAILELYPDAKLWVGPAIDNGFYYDVDMGDETITDKDFKT 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE KM EI      F  +  + E+A   ++ + + YKVE++E +     +T      + D
Sbjct: 121 IEDKMLEIARGKHDFKMRSATKEEALAYYKDRND-YKVELVEGL-EDGTITFCDHDTFTD 178

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG H+ +TG VK   K+M VAGAY++GD N   L+RIYG ++  Q+EL +YL+ LEE+
Sbjct: 179 LCRGGHIPNTGIVK-AVKVMSVAGAYYKGDENNKQLTRIYGVSFPKQKELKEYLHLLEEA 237

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           +KRDHRKL +E++LF  ++    G+  W  KG  +   L +++++ + K  YE + +P +
Sbjct: 238 KKRDHRKLGKELELFTFSQKVGQGLPLWLPKGAALRSQLENFLKKAQQKAGYEMVISPHI 297

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             + L+  SGH+  Y  + F    A +T K+   F LKPMNCP H  ++N    SY++LP
Sbjct: 298 GQKELYVTSGHYAKYGEDSFQ---AINTPKEDEEFLLKPMNCPHHCEIYNTKPFSYKDLP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
            R AEFG+VYR E SG LHGL RVRGFTQDDAH+FCT +Q+  E   + +L++ +++  G
Sbjct: 355 KRYAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCTPDQLDQEFKNVIDLVMYVFESLG 414

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           F+    ++S R  +     +GS   W+ AEN +      I  + +  +N  +  GE AFY
Sbjct: 415 FDNFTAQVSLRDPEKPEKYIGSTENWEKAENAI------INAAKEKELNYVIEYGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDA+GR WQ GTIQVD+NLP RF+  Y  S +E   PVMIHRA FGS+ERFI
Sbjct: 469 GPKLDFMVKDALGRSWQLGTIQVDYNLPERFDLTYKGSDNELHRPVMIHRAPFGSMERFI 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            I++E+  GN PLWL   QAI+  ++     Y +++  LL++H +  + D RNET+  KI
Sbjct: 529 AILLEHTGGNFPLWLMTEQAILLPVSEKYENYGKKVLTLLENHEIRAQIDNRNETVGKKI 588

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           RE  + K+P ++I G++E  + ++ +RR G      +++     ++ +E
Sbjct: 589 REAEMSKVPFMLIIGEQEEKDGTVSVRRHGVGDIGTLTMEAFADMVKEE 637


>gi|42523121|ref|NP_968501.1| hypothetical protein Bd1617 [Bdellovibrio bacteriovorus HD100]
 gi|73919772|sp|Q6MML0|SYT_BDEBA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|39575326|emb|CAE79494.1| thrS [Bdellovibrio bacteriovorus HD100]
          Length = 656

 Score =  626 bits (1613), Expect = e-177,   Method: Composition-based stats.
 Identities = 273/649 (42%), Positives = 410/649 (63%), Gaps = 20/649 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAING--KVCDLSDPVREGS-I 59
           S I +  PD S K F    T  +VA SI   LAK+ +   +NG  ++ DL   +++ + +
Sbjct: 4   SQITIILPDNSTKVFDHEPTALEVAMSIGPRLAKETLGAKLNGSTEISDLRTVLKDQTKV 63

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            ++T + P S+ V+RHSCAHIMA+A+Q IWPEV+V IGP+I++GFYYDFD    F+ +  
Sbjct: 64  ALVTTKSPESVEVVRHSCAHIMAQAIQDIWPEVKVTIGPVIDNGFYYDFDSPFAFTEEHF 123

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESI--PAKENVTLYRQG 177
            +IEKKM EI+++D P  ++    +KA E F+   E +KVE++E +    +  V +Y  G
Sbjct: 124 EKIEKKMSEIVSKDLPIHREDWPIQKAIETFKGMNERFKVELIEDLAKKGETTVGIYFNG 183

Query: 178 E-WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
             WFDLCRGPH++STGQ+K F KL+ VAGAYWRGD     L R+Y TA+N +++L  YL+
Sbjct: 184 TSWFDLCRGPHIQSTGQIKAF-KLLSVAGAYWRGDEKNAQLQRVYATAFNDKKDLETYLH 242

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
            +EE++KRDHRKL +E+ +F+  E   G  F+  KG  ++ +L +Y+R    +  Y+E+ 
Sbjct: 243 NIEEAKKRDHRKLGKELGMFYFNELAPGSPFFTGKGATVYNSLQTYLRELYFETGYQEVI 302

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TPQ+ D +L+  SGH+ +Y+ NMF  K       D R FA KPMNCP H  ++N    SY
Sbjct: 303 TPQIFDVNLFHTSGHYQNYKENMFFTKV------DERDFASKPMNCPSHCLLYNSEKYSY 356

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           R+LP+++A+FG ++R E SG++HGL RVR F QDDAH+FC  +Q+  E  K  NL+  +Y
Sbjct: 357 RDLPIKMADFGRLHRYEKSGAMHGLTRVRTFCQDDAHIFCRMDQLQEEIAKFMNLLNRVY 416

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
              G     + LSTRP+ R+GS+  WD AE  +   L ++       +   +  G+GAFY
Sbjct: 417 DKLGMGNYKIFLSTRPDNRMGSEEYWDMAEGALAEALKSLN------LPFELNPGDGAFY 470

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK + +  DA+ R WQ GT+QVD NLP  F+  Y    +++  PVM+HRA+ GS+ERFI
Sbjct: 471 GPKLDIMFVDALNRPWQLGTLQVDPNLPQAFDLKYTGEDNKEHRPVMLHRAILGSLERFI 530

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
           G+ +E+  G+LP W+ P+Q  +  +T     + +E+ N LK H + +E D RNE +NYKI
Sbjct: 531 GVYLEHTAGHLPPWMMPVQVAILNVTDRVNSFCEELQNSLKGHSVRVEFDRRNEKLNYKI 590

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           RE  ++KIP +II GDKEA  R++ +R    +  + +++   + ++T +
Sbjct: 591 REAQLQKIPYMIIVGDKEAESRTVSLRLRDGSEHKGLTVDQVMNLITTD 639


>gi|195387892|ref|XP_002052626.1| GJ17652 [Drosophila virilis]
 gi|194149083|gb|EDW64781.1| GJ17652 [Drosophila virilis]
          Length = 745

 Score =  625 bits (1612), Expect = e-177,   Method: Composition-based stats.
 Identities = 242/644 (37%), Positives = 365/644 (56%), Gaps = 22/644 (3%)

Query: 5   IKLTFPDGS-IKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           IK+T PDG  +       T  DVA  IS+ LA   +   +NG+V DL   +  + S++++
Sbjct: 107 IKVTLPDGKQVDATSWETTPYDVARGISQGLADNTIISKVNGEVWDLDRVLEGDCSLQLL 166

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQ 121
             +DP + AV  HS AHIM EA++ I+    +  GP IE GFYYD   E +  S+++   
Sbjct: 167 KFDDPDAQAVFWHSSAHIMGEAMERIYGGH-LCYGPPIESGFYYDMHLEGEGISTNDYGT 225

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +E  +++I+     F +  +      E+F+     +KV IL      +  T+Y+ G   D
Sbjct: 226 METLVKQIVKEKQNFERLEMKKSDLLEMFKY--NEFKVRILNEKVTTDRTTVYKCGSLID 283

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHVR TG+VK   K+ K +  YW G ++   L R+YG ++   ++L ++    EE+
Sbjct: 284 LCRGPHVRHTGKVK-ALKITKNSSTYWEGKADAETLQRVYGISFPDPKQLKEWEKLQEEA 342

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVL 300
            KRDHRK+ RE +LF   E   G  F+  +G  I+ TL++ +R + +   ++E+ +P + 
Sbjct: 343 AKRDHRKIGREQELFFFHELSPGSCFFQPRGAHIYNTLMNLIRGEYRKRGFQEVISPNIY 402

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  LW  SGHW  Y  NMF+ +       +   FALKPMNCPGH  +F++  +S+RELP+
Sbjct: 403 NAKLWMTSGHWQHYADNMFSFE------AEKEKFALKPMNCPGHCLIFDNRNRSWRELPL 456

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+A+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E     + +  +Y  FGF
Sbjct: 457 RMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAPEQIKSEMKGCLDFLRHVYTIFGF 516

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
              +V LSTRP+K +G    WD AE  +   L+      ++        G+GAFYGPK +
Sbjct: 517 SFQLV-LSTRPDKYLGELEQWDAAEKALAESLNEFGMPWKE------NPGDGAFYGPKID 569

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
             + DA+ R +QC TIQ+DF LP RFN  Y+    EK  PV+IHRA+ GS+ER I I+ E
Sbjct: 570 ITIMDALKRPFQCATIQLDFQLPIRFNLNYIADDGEKKRPVIIHRAILGSVERMIAILTE 629

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FRNETINYKIREHS 599
           N+ G  P WLSP Q +V  +  +  EYA+ + + L +     E D    +T+N KIR   
Sbjct: 630 NYAGKWPFWLSPRQVMVVPVGPAYDEYAKSVRDQLYAAGFMSEADCDAGDTMNKKIRNAQ 689

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           + +   I++ GDKE S  ++ +R   +    +VS+ + I  L K
Sbjct: 690 LAQFNFILVVGDKERSSNTVNVRTRDNKVHGEVSVAELITKLQK 733


>gi|55741823|ref|NP_001006977.1| threonyl-tRNA synthetase, cytoplasmic [Rattus norvegicus]
 gi|59896667|sp|Q5XHY5|SYTC_RAT RecName: Full=Threonyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|53734298|gb|AAH83914.1| Threonyl-tRNA synthetase [Rattus norvegicus]
          Length = 695

 Score =  625 bits (1612), Expect = e-177,   Method: Composition-based stats.
 Identities = 240/648 (37%), Positives = 363/648 (56%), Gaps = 23/648 (3%)

Query: 2   PSDIKLTFPDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
              IK+T PDG   +      T   +A  IS+ LA   V   +N  V DL  P+  + ++
Sbjct: 52  SKPIKVTLPDGKQVDAESWKTTPYQIACGISQGLADNTVVAKVNKVVWDLDRPLETDCTL 111

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQP-FSSDE 118
           E++  ED  + AV  HS AHIM EA++ ++    +  GP IE+GFYYD   E+   SS++
Sbjct: 112 ELLKFEDEEAQAVYWHSSAHIMGEAMERVYGGC-LCYGPPIENGFYYDMYLEEGGVSSND 170

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
            + +E   ++II     F +  +  E   E+F+     +K  IL         T+YR G 
Sbjct: 171 FSSLETLCKKIIKEKQTFERLEVKKETLLEMFKY--NKFKCRILNEKVNTPTTTVYRCGP 228

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLCRGPHVR TG++K   K+ K +  YW G ++   L RIYG ++   + L ++  F 
Sbjct: 229 LIDLCRGPHVRHTGKIKTL-KIHKNSSTYWEGKADMETLQRIYGISFPDPKLLKEWEKFQ 287

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
           EE++ RDHRK+ R+ +L+   E   G  F+  KG  I+ TL+ ++R + +   ++E+ TP
Sbjct: 288 EEAKNRDHRKIGRDQELYFFHELSPGSCFFLPKGAYIYNTLMEFIRSEYRKRGFQEVVTP 347

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  LW  SGHW  Y  NMF+ +       +   FALKPMNCPGH  +F+H  +S+RE
Sbjct: 348 NIFNSRLWMTSGHWQHYSENMFSFEV------EKEQFALKPMNCPGHCLMFDHRPRSWRE 401

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+RLA+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E     + + ++Y  
Sbjct: 402 LPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSV 461

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF   +  LSTRPEK +G   +W+ AE  ++  L+      +      +  G+GAFYGP
Sbjct: 462 FGFSFKLN-LSTRPEKFLGDIEIWNQAEKQLENSLNEFGEKWE------LNPGDGAFYGP 514

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIG 536
           K +  +KDAIGR  QC TIQ+DF LP RFN  YV+    +K  PV++HRA+ GS+ER I 
Sbjct: 515 KIDIQIKDAIGRYHQCATIQLDFQLPIRFNLTYVSHDGDDKKRPVIVHRAILGSVERMIA 574

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKI 595
           I+ EN+ G  P WLSP Q +V  +  +  EYAQ++          ++ D     T+N KI
Sbjct: 575 ILTENYGGKWPFWLSPRQVMVVPVGPTCDEYAQKVRQEFHDAKFMVDIDLDPGCTLNKKI 634

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           R   + +   I++ G+KE +  ++ IR   +    + ++ + +  L +
Sbjct: 635 RNAQLAQYNFILVVGEKEKASGTVNIRTRDNKVHGERTVGETVERLQQ 682


>gi|309782526|ref|ZP_07677250.1| threonine--tRNA ligase [Ralstonia sp. 5_7_47FAA]
 gi|308918863|gb|EFP64536.1| threonine--tRNA ligase [Ralstonia sp. 5_7_47FAA]
          Length = 580

 Score =  625 bits (1611), Expect = e-177,   Method: Composition-based stats.
 Identities = 306/593 (51%), Positives = 405/593 (68%), Gaps = 15/593 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +T PDGS + FP   T ++VA+SI   LAK A+A  ++G++ D S  + R+  + II
Sbjct: 1   MIAITLPDGSRREFPGPVTVAEVAQSIGAGLAKAALAGRVDGQMVDTSYTIDRDAKLAII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   + VIRHS AH++A AV+ ++P+ QV IGP+IE+GFYYDF  ++PF+ D+L  I
Sbjct: 61  TDKDADGVDVIRHSTAHLLAYAVKELYPDAQVTIGPVIENGFYYDFAYKRPFTPDDLVAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EKKM E+  +D    ++ LS + A +LF+   E YK EI+ SIP  + + LYR+G + DL
Sbjct: 121 EKKMGELAKKDEKVTREVLSRDDAVKLFQGMGEKYKAEIIASIPEDQEIGLYREGNFVDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG++K F KLMKVAGAYWRGD N  ML RIYGTAW  +++   YL+ LEE+E
Sbjct: 181 CRGPHVPSTGKLKVF-KLMKVAGAYWRGDHNNEMLQRIYGTAWAKREDQDAYLHMLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRKL RE+DLFHI E   G +FWH KGW ++Q +  YMRR  ++  Y+E+  PQ+LD
Sbjct: 240 KRDHRKLGRELDLFHIDEYSPGTVFWHPKGWTLWQEIEQYMRRVYRENGYQEVKGPQILD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+++GHWD YR NMF       T  + R +ALKPMNCPGH+ ++  G+KSYR+LP+R
Sbjct: 300 KTLWEKTGHWDKYRENMFI------TESEKREYALKPMNCPGHILIYKQGIKSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
             EFG+ +RNEPSG LHG+MRVRGFTQDD H+FCT++ +  E      L+  +YKDFGF 
Sbjct: 354 FGEFGACHRNEPSGGLHGIMRVRGFTQDDGHIFCTEDMIQAEVTAFTTLLQKVYKDFGFT 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
           +I+ KLSTRP+KR+G++  WD AE  +   L               L GEGAFYGPK EY
Sbjct: 414 EILYKLSTRPDKRIGTEESWDRAEAALAEGLRASGC------EFEYLPGEGAFYGPKIEY 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
           +LKDA+GR WQCGTIQVD NLP R +A +V     +  P+M+HRA+ GS+ERFIGI+IE 
Sbjct: 468 VLKDALGRQWQCGTIQVDPNLPERLDAEFVGEDGARHRPIMLHRAIVGSLERFIGILIEQ 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
           + G LP WLSP+Q  V +IT S  EYAQ +A  L+        D RNE I YK
Sbjct: 528 YAGALPTWLSPVQVAVLSITDSHAEYAQSVAQSLQKQGFRAVVDLRNEKIGYK 580


>gi|324505892|gb|ADY42525.1| Threonyl-tRNA synthetase [Ascaris suum]
          Length = 706

 Score =  625 bits (1611), Expect = e-177,   Method: Composition-based stats.
 Identities = 238/650 (36%), Positives = 363/650 (55%), Gaps = 26/650 (4%)

Query: 2   PSDIKLTFPDGSIKNFP---VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EG 57
           P  IK+T PDG  K F       T  +VAE ISR LA  A+A  +NG+V DL  P   + 
Sbjct: 60  PEAIKITLPDG--KQFDGKSWRTTPFEVAEKISRGLADTAIAAKVNGEVWDLDRPFEGDA 117

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSS 116
           +++++  +D     V  HS AH++ EA +  +    +  GP + +GFYYD  KE +  S 
Sbjct: 118 TLQLLKFDDEEGKQVFWHSSAHVLGEAAER-YCGAHLCYGPPLTEGFYYDMFKEGEAISP 176

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
           D+  ++E+ ++  +    PF +  +S +   E+F+     +K+ I+         T+YR 
Sbjct: 177 DDFPKLEEIVKCAVKDRQPFERLEVSKDDLLEMFKY--NKFKLRIINEKVHTPTATVYRC 234

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           G   DLCRGPHVR TG++K    + K + +YW G ++   L+RIYG ++   ++L ++  
Sbjct: 235 GPLIDLCRGPHVRHTGKIK-AMAITKTSSSYWEGRADAESLTRIYGISFPDSKQLKEWQR 293

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEIN 295
             EE+ KRDHRK+ R+ +LF       G  FW+ KG  I+ TL ++MR + +   + E+ 
Sbjct: 294 LQEEAAKRDHRKIGRDQELFFFHPLSPGAAFWYPKGAHIYNTLCNFMRNQYRKRGFTEVI 353

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           +P + +  LW+QSGHW  Y   MF ++       +   F LKPMNCPGH  +++H  +++
Sbjct: 354 SPNMFNSKLWEQSGHWQHYSDGMFKIEV------EKELFGLKPMNCPGHCLMYSHMPRTH 407

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
            ELP+R A+FG ++RNE SG+L GL RVR F QDDAH+FC  +Q+ +E     + I  +Y
Sbjct: 408 NELPMRYADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCRPDQINSEIKGCIDFINYVY 467

Query: 416 KD-FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            D FGF   +   +   E  +G  A WD AE  +K  LD   +  +      +  G+GAF
Sbjct: 468 VDVFGFTFKLNLSTRPEEGFLGDIATWDHAEAELKKALDESGHPWE------LNPGDGAF 521

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  ++DA+ R  QC TIQ+DF LP RF+  Y + ++E+  PVM+HRA+ GSIER 
Sbjct: 522 YGPKIDVTIQDALKRYHQCATIQLDFQLPQRFDLAYFDENNERKRPVMVHRALLGSIERM 581

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINY 593
             I+ ENF G  P WLSP QA V T+  S   YA+E+   L      +E D   ++T+N 
Sbjct: 582 TAILTENFGGKWPFWLSPRQAKVITVHESQRVYAKEVQKKLYEAGFEVEFDEMCSDTLNK 641

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +IR   + +   I++ G KEA   ++ +R   +    +V L D I   T+
Sbjct: 642 QIRNAQLAQFNFILVVGPKEAQNGTVNVRTRDNAVRGEVKLDDLIEKFTR 691


>gi|27229277|ref|NP_149065.2| threonyl-tRNA synthetase, cytoplasmic [Mus musculus]
 gi|59896669|sp|Q9D0R2|SYTC_MOUSE RecName: Full=Threonyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|26373003|dbj|BAB27429.2| unnamed protein product [Mus musculus]
 gi|74177703|dbj|BAE38950.1| unnamed protein product [Mus musculus]
 gi|74195699|dbj|BAE39654.1| unnamed protein product [Mus musculus]
 gi|74223282|dbj|BAE40773.1| unnamed protein product [Mus musculus]
 gi|74225376|dbj|BAE31616.1| unnamed protein product [Mus musculus]
 gi|148671337|gb|EDL03284.1| threonyl-tRNA synthetase, isoform CRA_b [Mus musculus]
          Length = 722

 Score =  625 bits (1611), Expect = e-177,   Method: Composition-based stats.
 Identities = 241/648 (37%), Positives = 363/648 (56%), Gaps = 23/648 (3%)

Query: 2   PSDIKLTFPDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
              IK+T PDG   +      T   +A  IS+ LA   V   +N  V DL  P+  + ++
Sbjct: 79  SKPIKVTLPDGKQVDAESWKTTPYQIACGISQGLADNTVVAKVNKVVWDLDRPLETDCTL 138

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQP-FSSDE 118
           E++  ED  + AV  HS AHIM EA++ ++    +  GP IE+GFYYD   E+   SS++
Sbjct: 139 ELLKFEDEEAQAVYWHSSAHIMGEAMERVYGGC-LCYGPPIENGFYYDMYLEEGGVSSND 197

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
            + +E   ++II     F +  +  E   E+F+     +K  IL         T+YR G 
Sbjct: 198 FSSLETLCKKIIKEKQTFERLEVKKETLLEMFKY--NKFKCRILNEKVNTPTTTVYRCGP 255

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLCRGPHVR TG++K   K+ K +  YW G ++   L RIYG ++   + L ++  F 
Sbjct: 256 LIDLCRGPHVRHTGKIKTL-KIHKNSSTYWEGKADMETLQRIYGISFPDPKLLKEWEKFQ 314

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
           EE++ RDHRK+ R+ +L+   E   G  F+  KG  I+ TL+ ++R + +   ++E+ TP
Sbjct: 315 EEAKNRDHRKIGRDQELYFFHELSPGSCFFLPKGAYIYNTLMEFIRSEYRKRGFQEVVTP 374

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  LW  SGHW  Y  NMF+ +       +   FALKPMNCPGH  +F+H  +S+RE
Sbjct: 375 NIFNSRLWMTSGHWQHYSENMFSFEV------EKEQFALKPMNCPGHCLMFDHRPRSWRE 428

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+RLA+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E     + + ++Y  
Sbjct: 429 LPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSV 488

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF   +  LSTRPEK +G   +W+ AE  ++  L+      +      +  G+GAFYGP
Sbjct: 489 FGFSFKLN-LSTRPEKFLGDIEIWNQAEKQLENSLNEFGEKWE------LNPGDGAFYGP 541

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIG 536
           K +  +KDAIGR  QC TIQ+DF LP RFN  YV+    +K  PV++HRA+ GS+ER I 
Sbjct: 542 KIDIQIKDAIGRYHQCATIQLDFQLPIRFNLTYVSHDGDDKKRPVIVHRAILGSVERMIA 601

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKI 595
           I+ EN+ G  P WLSP Q +V  +  +  EYAQ++           +TD     T+N KI
Sbjct: 602 ILTENYGGKWPFWLSPRQVMVVPVGPTCDEYAQKVRQQFHDAKFMADTDLDPGCTLNKKI 661

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           R   + +   I++ G+KE +  ++ IR   +    + ++ + +  L +
Sbjct: 662 RNAQLAQYNFILVVGEKEKASGTVNIRTRDNKVHGERTVEETVRRLQQ 709


>gi|320353536|ref|YP_004194875.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Desulfobulbus
           propionicus DSM 2032]
 gi|320122038|gb|ADW17584.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Desulfobulbus
           propionicus DSM 2032]
          Length = 641

 Score =  625 bits (1611), Expect = e-177,   Method: Composition-based stats.
 Identities = 283/648 (43%), Positives = 407/648 (62%), Gaps = 18/648 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESI-SRSLAKKAVAVAINGKVCDLSDPVR-EGSIE 60
           ++I ++  DG  K+FP+    +DV + + S    K+ VAV  +G++ DLS P+  +  IE
Sbjct: 2   AEISVSLQDGENKSFPLGTAVADVLKDLVSGKQRKQTVAVKCDGRLLDLSTPLAMDAVIE 61

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            ++      L ++RHS AHIMA AV+ ++ + V+VAIGP IEDGFYYDFD+E+PFSS+E 
Sbjct: 62  PVSVHSEAGLEILRHSTAHIMALAVKELFGDQVKVAIGPAIEDGFYYDFDREKPFSSEEF 121

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            QIE KM E+     PF++Q +  E+A   FE   E YK+E+L  + A E V+LY  G +
Sbjct: 122 EQIEAKMAELANARLPFVRQEMPKEEAIRFFEQHGEIYKLELLREMEA-ETVSLYTHGGF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV  +  +K F KL++VAG+YWRGD  R ML+RIYGTA+  ++EL QYL  LE
Sbjct: 181 VDLCRGPHVPDSSWIKVF-KLLRVAGSYWRGDEKRQMLTRIYGTAFADKKELQQYLARLE 239

Query: 240 ESEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTP 297
           E+ KRDHRKL +++ LF I  + G G+I W  +G  + + +  Y +    ++ Y+ + TP
Sbjct: 240 EARKRDHRKLGKQLGLFTIQDQIGPGLILWQPRGALLRRLIEDYWKDEHYRNGYQLLYTP 299

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +  Q LW+ SGH D Y  NM++    D+ +     + LKPMNCP H+ V+N    SYRE
Sbjct: 300 HIARQDLWKTSGHLDFYGENMYSAMEIDEVM-----YQLKPMNCPFHIGVYNADKHSYRE 354

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
            P+R  E G+VYR E +G+LHGLMRVRGFTQDDAH+FC  +Q+  E   I +L + I K 
Sbjct: 355 FPIRWCELGTVYRYERTGALHGLMRVRGFTQDDAHIFCRPDQLEEEIFNIIDLNLHILKT 414

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF++  V LSTRPEK VGSD  W  +   +K  L+      +  +   +  GEG FYGP
Sbjct: 415 FGFDQYDVYLSTRPEKYVGSDEHWQLSTQALKQALE------KKGLAYQLDPGEGVFYGP 468

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  +KD +GR WQC TIQVDFNLP RF   Y      +  P+MIHRA+ GS+ERFIG+
Sbjct: 469 KIDIKIKDQLGRSWQCSTIQVDFNLPERFQMNYTGVDGAEHQPIMIHRALMGSLERFIGV 528

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE++ G  PLWL+P QA +  IT    EY +++   L++  + I+ D RNE +NYKIRE
Sbjct: 529 LIEHYAGAFPLWLAPEQARIMNITDDQGEYCEQVHARLRAMGVRIDKDVRNEKLNYKIRE 588

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
             + K+P ++I G++E  E ++ +R+        ++    + ++ +E 
Sbjct: 589 AQLMKVPYMLIVGEREKQEGTVTVRKRDGENLPAMTPEAFVDLVIEEC 636


>gi|194333013|ref|YP_002014873.1| threonyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271]
 gi|238693296|sp|B4S3D2|SYT_PROA2 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|194310831|gb|ACF45226.1| threonyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271]
          Length = 657

 Score =  625 bits (1611), Expect = e-177,   Method: Composition-based stats.
 Identities = 257/645 (39%), Positives = 393/645 (60%), Gaps = 16/645 (2%)

Query: 9   FPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDP 67
            PDG  ++FP   TG D+A SI + LA+ A+AV ING+  DL  PV  + SIEI+T + P
Sbjct: 15  LPDGESRSFPFGTTGYDIARSIGKKLAQDALAVVINGRAQDLDSPVSEDASIEIVTFDHP 74

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQ 127
               +  HS +HIMA A++ ++P  +   GP IE GFYYD      F+  +L  IE +M 
Sbjct: 75  LGKEIFWHSASHIMAHAIEELFPGSRFGAGPAIEQGFYYDIASSHRFTESDLHDIETRMI 134

Query: 128 EIIARDSPFLKQYLSHEKARELFES-KKEAYKVEILES-IPAKENVTLYRQGEWFDLCRG 185
           EI  R     ++ LS + A + F S +K+ YKVEILE  +     V++Y QGE+ DLC G
Sbjct: 135 EIGRRAIDVRREELSRQAAIDFFSSTRKDPYKVEILEDTLKDTPTVSIYHQGEFADLCTG 194

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PH+ +T ++K   KL  ++ ++WRGDS+R  + RIYG A+ +++ L Q+L  +EE++KRD
Sbjct: 195 PHLPNTSKLK-AVKLTNISASFWRGDSSRESMQRIYGIAFPSEKLLKQHLAHIEEAKKRD 253

Query: 246 HRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQH 303
           HRKL  E++LF ++ + GSG+  W  KG  +   L S++R + +   Y  + TP + +  
Sbjct: 254 HRKLGAELELFMLSPEVGSGLPIWLPKGAIVRNELESFLREEQRKRGYVPVYTPHIGNIG 313

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           L+++SGH+  Y  + F      D +     + LKPMNCP H  +++  L+SYR+LP+RL 
Sbjct: 314 LYKRSGHYPYYSESQFPPLTYTDDLGREEQYLLKPMNCPHHHMIYSSKLRSYRDLPIRLT 373

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFG+VYR+E SG L+GL+R RGFTQDD+H++C  +Q+ +E     +L   ++   GF+ I
Sbjct: 374 EFGTVYRHEQSGELNGLIRARGFTQDDSHIYCRPDQLVDEICNAIDLTKFVFATLGFDDI 433

Query: 424 MVKLS----TRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
            ++LS       +K  G+  +W+ AE  ++   D +       I+    +GE +FYGPK 
Sbjct: 434 QIRLSLHDPENQDKYGGTKEVWEQAEKDVREAADRMN------IDYFTGIGEASFYGPKI 487

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           ++I++DAIGR WQ GT+QVD+ +P RF+  Y+ S  +   PV+IHRA FGS+ERFIG++I
Sbjct: 488 DFIVRDAIGRKWQLGTVQVDYVMPERFDLSYIGSDGQPHRPVIIHRAPFGSMERFIGVLI 547

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E+  GN PLWL+P+Q  V  IT    +YA ++ + L +  + +E D R+E I  KIRE  
Sbjct: 548 EHTGGNFPLWLAPVQIAVLPITDEVHDYAVQVRDTLHAAGMRVELDTRSEKIGKKIRESE 607

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           + KIP ++I G KEA+   + +RR        +++ +    L KE
Sbjct: 608 VAKIPYMVIIGQKEAAAGEVSLRRHREGDQGNMTVEELKEKLAKE 652


>gi|262067494|ref|ZP_06027106.1| threonine--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
 gi|291378856|gb|EFE86374.1| threonine--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
          Length = 637

 Score =  624 bits (1610), Expect = e-176,   Method: Composition-based stats.
 Identities = 287/639 (44%), Positives = 406/639 (63%), Gaps = 17/639 (2%)

Query: 11  DGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRS 69
           +G  K +  +    ++A+ IS SLAKK+V   I+GK  D+S  +  +  +E I  + P  
Sbjct: 6   NGENKEYDNNINMFEIAKGISNSLAKKSVGAKIDGKNVDMSYVLDHDAEVEFIDIDSPEG 65

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
             ++RHS AH+MA+AV  ++PE +V IGP+IE+GFYYDFD  + F+ ++L +IE +M+ I
Sbjct: 66  EDIVRHSTAHLMAQAVLRLYPETKVTIGPVIENGFYYDFDPVEQFTEEDLEKIEAEMKRI 125

Query: 130 IARDSPFLKQYLSHEKARELFES-KKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           +  +    K  L  ++A + F    K  YKVE++E IP  E V+ Y+QG++ DLCRG HV
Sbjct: 126 VKENIKLEKYVLPRDEAIDYFRDVDKNKYKVEVVEGIPQGEQVSFYKQGDFTDLCRGTHV 185

Query: 189 RSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRK 248
            STG +K F KL  VAGAYWRG+S   ML RIYG +++ +  L ++L F+EE+EKRDHRK
Sbjct: 186 PSTGYLKAF-KLRTVAGAYWRGNSKNKMLQRIYGYSFSNEDRLKKHLKFMEEAEKRDHRK 244

Query: 249 LAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQ 307
           L +E++LF I+E G G  F+  KG      LI   R++ +   Y ++ TP +L++ LW+ 
Sbjct: 245 LGKELELFFISEYGPGFPFFLPKGMVFRNVLIDLWRKEHEKAGYLQLETPIMLNKELWEI 304

Query: 308 SGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGS 367
           SGHW +YR NM+  +       D   FA+KPMNCPG V  F H L SY++LP RLAE G 
Sbjct: 305 SGHWFNYRENMYTSEI------DELEFAIKPMNCPGGVLSFKHQLHSYKDLPARLAELGK 358

Query: 368 VYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKL 427
           V+R+E SG+LHGLMRVR FTQDD+H+F T +Q+ +E + + NLI   Y      +  ++L
Sbjct: 359 VHRHEFSGALHGLMRVRSFTQDDSHIFMTPDQVQDEIIGVVNLIDKFYSKLFGFEYEIEL 418

Query: 428 STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAI 487
           ST+PEK +GS  +WD AE+ + G LD +           +  G+GAFYGPK ++ +KDAI
Sbjct: 419 STKPEKAIGSQEIWDMAESALAGALDKLGR------KYKINPGDGAFYGPKLDFKIKDAI 472

Query: 488 GRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           GR WQCGTIQ+DFNLP RF+  Y+    EK  PVM+HR ++GSIERFIGI+IE++ G  P
Sbjct: 473 GRMWQCGTIQLDFNLPERFDVTYIGEDGEKHRPVMLHRVIYGSIERFIGILIEHYAGAFP 532

Query: 548 LWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH-SIKKIPII 606
           +WL+P+Q  V T+    + YA+EI + L+   +  E D RNETI YKIRE     KIP+ 
Sbjct: 533 MWLAPVQVKVLTLNDECIPYAKEIMDKLQELGIRAELDDRNETIGYKIREANGKYKIPMQ 592

Query: 607 IICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           +I G  E   + + IRRFGS      SL +    +  E+
Sbjct: 593 LIIGKNEVENKEVNIRRFGSKDQFPKSLDEFYDYVVDEA 631


>gi|71895375|ref|NP_001026618.1| threonyl-tRNA synthetase, cytoplasmic [Gallus gallus]
 gi|53128235|emb|CAG31282.1| hypothetical protein RCJMB04_4k14 [Gallus gallus]
          Length = 711

 Score =  624 bits (1610), Expect = e-176,   Method: Composition-based stats.
 Identities = 244/648 (37%), Positives = 360/648 (55%), Gaps = 23/648 (3%)

Query: 2   PSDIKLTFPDGS-IKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
              IK+T PDG  +       T   +A  IS+ LA   V   +N  V DL  P+  + ++
Sbjct: 68  SKPIKVTLPDGKLVDAESWKTTPYQIACGISQGLADNTVIAKVNKMVWDLDRPLEEDCTL 127

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQP-FSSDE 118
           E++  ED  + AV  HS AHIM EA++ I+    +  GP IE+GFYYD   E    SS++
Sbjct: 128 ELLKFEDEEAQAVYWHSSAHIMGEAMERIYGGC-LCYGPPIENGFYYDMFLEDGGVSSND 186

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
            + +E   ++I+    PF +  +  E   E+F+     +K  IL         T+YR G 
Sbjct: 187 FSALETLCKKIMKEKQPFERLEVKKETLLEMFKY--NKFKCRILNEKVNTPTTTVYRCGP 244

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLCRGPHVR TG++K   K+ K +  YW G ++   L RIYG ++   + L ++  F 
Sbjct: 245 LIDLCRGPHVRHTGKIKSI-KIHKNSSTYWEGKADMETLQRIYGISFPDAKMLKEWEKFQ 303

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
           EE++ RDHRK+ R+ +LF   E   G  F+  KG  I+ TLI ++R + +   ++E+ TP
Sbjct: 304 EEAKNRDHRKIGRDQELFFFHELSPGSCFFLPKGAYIYNTLIEFIRSEYRKRGFQEVVTP 363

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  LW  SGHW  Y  NMF+ +       +   FALKPMNCPGH  +F+H  +S+RE
Sbjct: 364 NIFNSKLWMTSGHWQHYSENMFSFEV------EKEIFALKPMNCPGHCLMFDHRPRSWRE 417

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+RLA+FG ++RNE SG+L GL RVR F QDDAH+FC+ EQ+  E       + ++Y  
Sbjct: 418 LPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCSVEQIEEEIKSCLQFLRAVYDV 477

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF   +  LSTRPEK +G   +W+ AE  ++  L+      +      +  G+GAFYGP
Sbjct: 478 FGFSFKLN-LSTRPEKYLGDIEVWNRAEKQLENSLNDFGEKWE------LNPGDGAFYGP 530

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC-HPVMIHRAVFGSIERFIG 536
           K +  +KDAIGR  QC TIQ+DF L  RFN  +V+        PV+IHRA+ GS+ER I 
Sbjct: 531 KIDIQIKDAIGRYHQCATIQLDFQLSIRFNLTFVSHDGNDKTRPVIIHRAILGSVERMIA 590

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FRNETINYKI 595
           I+ EN+ G  PLWLSP Q +V  +  +  EYAQ++        L  + D     T+N KI
Sbjct: 591 ILTENYGGKWPLWLSPQQVMVVPVGPTCDEYAQKVRQQFHDAGLMADIDVDPGCTLNKKI 650

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           R   + +   I++ G+KE +  ++ IR   +    + ++ D +  L +
Sbjct: 651 RNAQLAQYNFILVVGEKEKASGTVNIRTRDNKVHGERTIADTVKRLLE 698


>gi|34540737|ref|NP_905216.1| threonyl-tRNA synthetase [Porphyromonas gingivalis W83]
 gi|73919814|sp|Q7MVQ5|SYT_PORGI RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|34397051|gb|AAQ66115.1| threonyl-tRNA synthetase [Porphyromonas gingivalis W83]
          Length = 653

 Score =  624 bits (1610), Expect = e-176,   Method: Composition-based stats.
 Identities = 253/650 (38%), Positives = 394/650 (60%), Gaps = 20/650 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+TFPDG+ + +    TG D+A SIS  L +  +A  +NG+V DL   +  +  +++ 
Sbjct: 1   MIKITFPDGNFREYEAGITGWDIAGSISPRLQQDVLAAGVNGQVWDLHRQINEDAEVKLF 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFS--SDELA 120
             +D        HS AH+MAEA++ ++P ++  IGP IE+GFYYD D  +  S    +L 
Sbjct: 61  KWDDAEGKHAFWHSSAHLMAEALEELYPGIKFGIGPAIENGFYYDVDPGEGISIKDADLP 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEK+MQ++ AR    +++ ++   A  +F  K + YKVE++  + A   +T Y QG + 
Sbjct: 121 AIEKRMQDLAARKETIIRRDIAKADALRMFGDKDDQYKVELISEL-ADGTITTYTQGGFT 179

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ +TG +K   KL+ VAGAYWRGD  R  L+RIYG ++  ++ L +YL  LEE
Sbjct: 180 DLCRGPHLPNTGYIK-AIKLLSVAGAYWRGDEKRKQLTRIYGISFPKKKMLDEYLELLEE 238

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           ++KRDHRK+ +E++LF  +++   G+  W  +G ++   L  ++++ +    Y+++ TP 
Sbjct: 239 AKKRDHRKIGKELELFAFSQNVGAGLPLWLPRGTQLRLRLEDFLKQIQKHFGYQQVITPH 298

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           + +++L+  SGH+  Y  + F      +T ++   F LKPMNCP H  +F     SYR+L
Sbjct: 299 IGNKNLYITSGHYAKYGQDSFR---PINTPQEGEEFMLKPMNCPHHCEIFKITPHSYRDL 355

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFG+VYR E SG LHGL RVRGFTQDDAH+FC  +Q+  E  K+ ++I  I+K  
Sbjct: 356 PIRLAEFGTVYRYEQSGELHGLTRVRGFTQDDAHLFCRPDQLKEEFCKVMDIIFIIFKAL 415

Query: 419 GFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            F+    ++S R     EK +GS+  W+ AE  +    +      +  +   +  GE AF
Sbjct: 416 DFKNFEAQISLRDKVNREKYIGSEENWERAERAIIEACE------EKGLPAVIEYGEAAF 469

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK ++++KDA+GR WQ GTIQVD+NLP RF+  Y    ++K  PVMIHRA FGS+ERF
Sbjct: 470 YGPKLDFMVKDALGRRWQLGTIQVDYNLPERFDLEYTGEDNKKHRPVMIHRAPFGSMERF 529

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
           + ++IE+  G  PLWL+P Q +V  ++    EYA  +A  L    + ++ D RNE +  K
Sbjct: 530 VAVLIEHTAGKFPLWLTPDQVVVLPVSERFNEYAHRVAKELNQRDIRVQVDDRNEKVGRK 589

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IR++ +K+IP ++I G+ E+ E  + +R+ G      + +     ++ KE
Sbjct: 590 IRDNELKRIPYMLIVGENESREEEVSVRKQGEGDMGIMKITTFAELIEKE 639


>gi|332664427|ref|YP_004447215.1| threonyl-tRNA synthetase [Haliscomenobacter hydrossis DSM 1100]
 gi|332333241|gb|AEE50342.1| threonyl-tRNA synthetase [Haliscomenobacter hydrossis DSM 1100]
          Length = 645

 Score =  624 bits (1610), Expect = e-176,   Method: Composition-based stats.
 Identities = 270/654 (41%), Positives = 396/654 (60%), Gaps = 18/654 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIEIIT 63
            I +TFPDG ++ +    T  +VA SIS  LA+K ++  +NG+V D + P+   S   + 
Sbjct: 1   MINITFPDGKVREYEPGTTALEVARSISEGLAQKVLSAKVNGEVWDATRPITTDSTLTLL 60

Query: 64  -PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
             +D        HS AH+MAEA+++++P ++   GP  E GFYYD D   +P S D+L +
Sbjct: 61  TWDDKDGKTTFWHSSAHLMAEALEALFPGIKFGTGPATEGGFYYDVDPGSKPLSLDDLPK 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE+KM E+  + + +++  +S E+A   F+ K + YK+E++E     E +TLY+QG + D
Sbjct: 121 IEEKMLELARQKNRYVRSDISKEEALRFFQEKGDEYKIELIEKRGPDEALTLYQQGNFVD 180

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+  TG +K   KL  VAGAYW+GD  R  L RIYG ++  Q++L ++L  LEE+
Sbjct: 181 LCRGPHIPDTGFIK-AVKLTNVAGAYWQGDDTRQQLQRIYGVSFPKQKDLQEHLVMLEEA 239

Query: 242 EKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQV 299
            KRDHRKL +E++LF  +   G+G+  W  KG  +   L++++R  + K  Y+ + TP +
Sbjct: 240 RKRDHRKLGQELELFMFSERVGAGLPIWLPKGNALRDRLMNFLRVEQEKRGYKLVTTPHI 299

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             + L+  SGH+  Y  + F       T KD   F LKPMNCP H  ++ H   SYR+LP
Sbjct: 300 GRKELYVTSGHYAKYGKDSFQ---PIHTPKDGEEFLLKPMNCPHHCEIYAHRPHSYRDLP 356

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AEFG+VYR E +G LHGL RVRGFTQDDAH+FCT+EQ+  E L + +L  ++    G
Sbjct: 357 MRIAEFGTVYRYEQTGELHGLSRVRGFTQDDAHIFCTEEQVKGEFLNVLDLTRTVLYKMG 416

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           F++   ++S R        +GSD  W +AEN +      I+ + +  + T + LGE AFY
Sbjct: 417 FKEFTAQISLRDPNTPEKYLGSDENWRNAENAI------IEATREVGLKTTMELGEAAFY 470

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +++++DAIGR WQ GTIQVD+NLP RF   YV + ++   PVMIHRA FGS+ERFI
Sbjct: 471 GPKLDFMVRDAIGRQWQLGTIQVDYNLPERFELEYVGADNKTHRPVMIHRAPFGSMERFI 530

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            I+IEN  G  PLWL P Q  +  I+   V+Y +EI   L +H +    D RNETI  KI
Sbjct: 531 SILIENTAGKFPLWLMPEQYALLPISEKFVDYCKEIEEKLATHDIRGYVDDRNETIGRKI 590

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPD 649
           R+  +K+IP ++I G+KE     + +RR G      +SL   + +  +     D
Sbjct: 591 RDTELKRIPYMLIVGEKEMEATGVAVRRQGEGDKGSMSLEAFVSLFGEALAKED 644


>gi|312901397|ref|ZP_07760674.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0470]
 gi|311291473|gb|EFQ70029.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0470]
          Length = 626

 Score =  624 bits (1609), Expect = e-176,   Method: Composition-based stats.
 Identities = 248/617 (40%), Positives = 384/617 (62%), Gaps = 23/617 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +TFPDG++K F    T  DVA+SIS SLAKKA+A   NG + DL  P+  +GS+EI+
Sbjct: 23  SIHITFPDGAVKPFDSGVTTFDVAKSISNSLAKKALAGKFNGVLIDLDRPIVEDGSLEIV 82

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
           TP+   +L ++RHS AH+MA A++ ++P ++  +GP I+ GFYYD D  E P ++++L  
Sbjct: 83  TPDHEDALGILRHSSAHLMANALRRLFPNIKFGVGPAIDSGFYYDTDNGESPVTAEDLPA 142

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE +M +I+  ++P +++ +S  +A EL     + YKVE++  +P  E +T+Y QG++ D
Sbjct: 143 IEAEMMKIVKENNPIVRKEISRAEALEL--FADDPYKVELITDLPEDEIITVYDQGDFVD 200

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG HV STG+++ F KL+ VAGAYWRG+S+  M+ RIYGTA+  +++L +++   EE+
Sbjct: 201 LCRGVHVPSTGRIQVF-KLLSVAGAYWRGNSDNHMMQRIYGTAFFDKKDLKEFIKMREEA 259

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDHRKL +E+DLF ++++ GSG+ FW  KG  I +T+  Y+  ++I   Y+ + TP +
Sbjct: 260 KERDHRKLGKELDLFMVSQEVGSGLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIM 319

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            D  L++ SGHWD Y  +MF          D     L+PMNCP H+ V+ + + SYRELP
Sbjct: 320 ADVELYKTSGHWDHYHEDMFPPMDMG----DGEMLVLRPMNCPHHMMVYKNDIHSYRELP 375

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  +   L++++Y DF 
Sbjct: 376 IRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVAVYADFN 435

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R           DA+W+ A+ ++K  +D ++      ++     GE AFY
Sbjct: 436 ITDYRFRLSYRDPNNTDKYFDDDAMWEKAQAMLKAAMDELE------LDYFEAEGEAAFY 489

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK-CHPVMIHRAVFGSIERF 534
           GPK +  +K A+G +    TIQ+DF LP RF+  YV    E    PV+IHR +  ++ERF
Sbjct: 490 GPKLDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTMERF 549

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           +  + E +KG  P WL+PIQA +  ++  +  EYA EI   L++  L +E D RNE + Y
Sbjct: 550 VAYLTEVYKGAFPTWLAPIQATIIPVSVEAHSEYAYEIKERLQAQGLRVEVDDRNEKMGY 609

Query: 594 KIREHSIKKIPIIIICG 610
           KIR    +K+P  ++ G
Sbjct: 610 KIRASQTQKVPYQLVVG 626


>gi|149027310|gb|EDL82977.1| threonyl-tRNA synthetase, isoform CRA_a [Rattus norvegicus]
          Length = 722

 Score =  624 bits (1609), Expect = e-176,   Method: Composition-based stats.
 Identities = 240/648 (37%), Positives = 363/648 (56%), Gaps = 23/648 (3%)

Query: 2   PSDIKLTFPDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
              IK+T PDG   +      T   +A  IS+ LA   V   +N  V DL  P+  + ++
Sbjct: 79  SKPIKVTLPDGKQVDAESWKTTPYQIACGISQGLADNTVVAKVNKVVWDLDRPLETDCTL 138

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQP-FSSDE 118
           E++  ED  + AV  HS AHIM EA++ ++    +  GP IE+GFYYD   E+   SS++
Sbjct: 139 ELLKFEDEEAQAVYWHSSAHIMGEAMERVYGGC-LCYGPPIENGFYYDMYLEEGGVSSND 197

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
            + +E   ++II     F +  +  E   E+F+     +K  IL         T+YR G 
Sbjct: 198 FSSLETLCKKIIKEKQTFERLEVKKETLLEMFKY--NKFKCRILNEKVNTPTTTVYRCGP 255

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLCRGPHVR TG++K   K+ K +  YW G ++   L RIYG ++   + L ++  F 
Sbjct: 256 LIDLCRGPHVRHTGKIKTL-KIHKNSSTYWEGKADMETLQRIYGISFPDPKLLKEWEKFQ 314

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
           EE++ RDHRK+ R+ +L+   E   G  F+  KG  I+ TL+ ++R + +   ++E+ TP
Sbjct: 315 EEAKNRDHRKIGRDQELYFFHELSPGSCFFLPKGAYIYNTLMEFIRSEYRKRGFQEVVTP 374

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  LW  SGHW  Y  NMF+ +       +   FALKPMNCPGH  +F+H  +S+RE
Sbjct: 375 NIFNSRLWMTSGHWQHYSENMFSFEV------EKEQFALKPMNCPGHCLMFDHRPRSWRE 428

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+RLA+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E     + + ++Y  
Sbjct: 429 LPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSV 488

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF   +  LSTRPEK +G   +W+ AE  ++  L+      +      +  G+GAFYGP
Sbjct: 489 FGFSFKLN-LSTRPEKFLGDIEIWNQAEKQLENSLNEFGEKWE------LNPGDGAFYGP 541

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIG 536
           K +  +KDAIGR  QC TIQ+DF LP RFN  YV+    +K  PV++HRA+ GS+ER I 
Sbjct: 542 KIDIQIKDAIGRYHQCATIQLDFQLPIRFNLTYVSHDGDDKKRPVIVHRAILGSVERMIA 601

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKI 595
           I+ EN+ G  P WLSP Q +V  +  +  EYAQ++          ++ D     T+N KI
Sbjct: 602 ILTENYGGKWPFWLSPRQVMVVPVGPTCDEYAQKVRQEFHDAKFMVDIDLDPGCTLNKKI 661

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           R   + +   I++ G+KE +  ++ IR   +    + ++ + +  L +
Sbjct: 662 RNAQLAQYNFILVVGEKEKASGTVNIRTRDNKVHGERTVGETVERLQQ 709


>gi|258592606|emb|CBE68915.1| Threonyl-tRNA synthetase (Threonine--tRNA ligase) (ThrRS) [NC10
           bacterium 'Dutch sediment']
          Length = 680

 Score =  624 bits (1609), Expect = e-176,   Method: Composition-based stats.
 Identities = 258/672 (38%), Positives = 394/672 (58%), Gaps = 37/672 (5%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEII 62
            I +T  DG    F    T   V E++  +  K+A+   +NG++ DL  P+ E + +E+I
Sbjct: 8   SIVVTLDDGRRHEFSSGVTVLAVLEAVDPAAKKEAIGANVNGRLVDLCSPIEEDARVELI 67

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
               P  L+++RHS AH+MA AVQ + P  + AIGP I+DGFYYD +  +P + D+L  I
Sbjct: 68  GITSPEGLSMLRHSAAHLMAAAVQKLLPSSKFAIGPAIQDGFYYDIEPPRPLTQDDLPAI 127

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESI----------------- 165
           E  M+E+  +  PF++  +  ++A     +  + YK+E+LE+I                 
Sbjct: 128 EAAMRELSEQRLPFVRCEVPLDEAIAKVAALNQPYKIELLETIRDRVTAPSGPVQEDELE 187

Query: 166 ----PAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIY 221
               PA +  + Y  G++ DLCRGPHV  T  V +FF+L  +AGAYWRGD  RPML+RIY
Sbjct: 188 HEVDPAAQRASFYTTGDFIDLCRGPHVLDTS-VVRFFRLTHLAGAYWRGDERRPMLTRIY 246

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLI 280
           G A+ TQ+ L  +L+ LEE+++RDHR+L RE++LF + ++ G G++ WH KG  + + + 
Sbjct: 247 GIAFPTQEALEAHLFLLEEAKRRDHRRLGRELELFSVHDEIGGGLVLWHPKGALVRKLIE 306

Query: 281 SYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPM 339
              R   +K+ Y+ + TP V    LW+ SGH D Y+  M+          +   + +KPM
Sbjct: 307 DLWREQHLKNGYDLVYTPHVGRATLWETSGHLDFYQEFMYPRMEM-----EGNDYYVKPM 361

Query: 340 NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQ 399
           NCP H+ +F   + SYRELPVR AE G+VYR E +G LHGL+RVRGFTQDDAH+FCT +Q
Sbjct: 362 NCPFHIKLFQSKVHSYRELPVRFAELGTVYRFERAGVLHGLLRVRGFTQDDAHIFCTPQQ 421

Query: 400 MFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSS 459
           M +E  +  +  ++    FGF++    ++TRPEK +G   LW+DA   ++   D      
Sbjct: 422 MVSEVARAVSFSLAFLSSFGFDRYDAYIATRPEKAIGDQELWNDATEALRRAADDAG--- 478

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
              +   +  G GAFYGPK +  ++DA+GR WQC T+Q DFNLP RF+  YV   +    
Sbjct: 479 ---LAYQIDDGGGAFYGPKIDLKVRDALGRAWQCTTVQFDFNLPERFDITYVGEDNRPHR 535

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH 579
           P M+HRA+ GS+ERF G+++E+  G  P WL+P+QA +  +      YAQ+++  L++  
Sbjct: 536 PFMVHRAILGSLERFFGVLVEHHAGAFPTWLAPVQARLVPVADRFQPYAQQVSEQLRAAG 595

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
           +  ETD RNE + YKIR+  ++K P I++ G+KEA+  ++ +R  G      + +     
Sbjct: 596 IRTETDVRNEKVGYKIRDAEMQKTPYILVVGEKEATSGAVSVRGRGGRDMGVMPIDQFAA 655

Query: 640 ILTKESLPPDCQ 651
            + +E L P  +
Sbjct: 656 AIQEE-LKPALR 666


>gi|91201672|emb|CAJ74732.1| strongly similar to threonyl-tRNA synthetase [Candidatus Kuenenia
           stuttgartiensis]
          Length = 640

 Score =  624 bits (1609), Expect = e-176,   Method: Composition-based stats.
 Identities = 277/648 (42%), Positives = 402/648 (62%), Gaps = 20/648 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEII 62
            +K+T PDG+ K+F  + T  +VA +I+  +   A+A   +G + DL+ P+++  S+ +I
Sbjct: 1   MVKVTLPDGTKKDFEDNITIGEVASNINSKMGGIALAARADGVLVDLNYPIKDDISLSVI 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T E    L +IRHS AHIMA+AV  ++P V++ IGP IE+GFYYDFD    F++++L +I
Sbjct: 61  TEETQEGLEIIRHSTAHIMAQAVCRLFPGVKLGIGPTIENGFYYDFDCPNHFTTEDLKKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M +II  D  F +  +  E A +  E   + YKVE++  I   + V+ YRQ E+ DL
Sbjct: 121 EDEMLKIIKEDIRFERTDMPRELAVKEMEKSGQPYKVELIRDI-EDDTVSFYRQNEFIDL 179

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH++ TG+VK F KL+ VAGAYWRG     ML RIYGTA+ T ++L +YL  LEE+E
Sbjct: 180 CRGPHIQKTGRVKSF-KLLSVAGAYWRGKETNSMLQRIYGTAFFTNEDLKKYLKMLEEAE 238

Query: 243 KRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVL 300
           KRDHRK+ +++DLF   EDG  G+ FWH KG ++   +  + R    +  YE + +P + 
Sbjct: 239 KRDHRKIGKDLDLFSFHEDGGAGLAFWHPKGARMRSIIEDFWRQEHFRRGYEILYSPHIA 298

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
             +LW+ SGHWD YR +M++         D   + LKPMNCP  V ++   L SYR+LP+
Sbjct: 299 KINLWKTSGHWDFYRESMYSPIDV-----DGHEYILKPMNCPFAVLIYKTKLHSYRDLPL 353

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R  E G+VYR E SG LHGL+RVRGFTQDDAH+FCT +Q+  E L++  L   +   FGF
Sbjct: 354 RWGELGTVYRYERSGVLHGLLRVRGFTQDDAHIFCTPDQLEQEILEVIKLAQFMLSSFGF 413

Query: 421 EKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
            +  ++LS R     EK +G D +WD AE+ +K  L+         ++   + GE  FYG
Sbjct: 414 NEYEIELSVRGKGEKEKYIGRDDVWDHAEDALKIALEKTG------LHYTRMEGEAKFYG 467

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           P  +  +KDAIGR WQ  TIQVDFNLP RF+  YV S       VMIHR V G++ERFIG
Sbjct: 468 PAIDIKVKDAIGRGWQGPTIQVDFNLPERFDVNYVGSDGYHHRVVMIHRTVMGAMERFIG 527

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
            +IE+F G+ PLW++PIQ  + +IT + ++YA+++   L   +  +E D  N  I YKIR
Sbjct: 528 CLIEHFAGDFPLWIAPIQMRILSITDAQIDYAKKLQTELLLKNFRVECDIGNNKIGYKIR 587

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           E +++KIP ++I G+KE  E  + +R   +     + + D I  + +E
Sbjct: 588 EGTLQKIPYLLIVGNKEMEEGLVAVRSRKNGDEGALPVRDFISKVEEE 635


>gi|195472319|ref|XP_002088448.1| Aats-thr [Drosophila yakuba]
 gi|194174549|gb|EDW88160.1| Aats-thr [Drosophila yakuba]
          Length = 747

 Score =  624 bits (1609), Expect = e-176,   Method: Composition-based stats.
 Identities = 241/644 (37%), Positives = 365/644 (56%), Gaps = 22/644 (3%)

Query: 5   IKLTFPDGS-IKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           IK+T PDG  +       T  +VA  IS+ LA   V   +NG+V DL   +    +++++
Sbjct: 109 IKVTLPDGKQVDATSWETTPYEVARGISQGLADNTVISKVNGEVWDLDRVLESNCTLQLL 168

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQ 121
             +DP + AV  HS AHIM EA++ I+    +  GP I++GFYYD   + +  S+++   
Sbjct: 169 KFDDPEAQAVFWHSSAHIMGEAMERIYGGH-LCYGPPIDNGFYYDMHLDGEGISTNDYGA 227

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +E  +++I+     F +  +      E+F+     +KV IL      +  T+Y+ G   D
Sbjct: 228 MEGLVKQIVKEKQNFERLEMKKSDLLEMFKY--NEFKVRILNEKVTTDRTTVYKCGSLID 285

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHVR TG+VK   K+ K +  YW G ++   L R+YG ++   ++L ++    EE+
Sbjct: 286 LCRGPHVRHTGKVK-ALKITKNSSTYWEGKADAETLQRVYGISFPDPKQLKEWEKLQEEA 344

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVL 300
            KRDHRK+ RE +LF   E   G  F+  +G  I+ TL+S+M+ + +   ++E+ +P + 
Sbjct: 345 AKRDHRKIGREQELFFFHELSPGSCFFQPRGAHIYNTLMSFMKAEYRKRGFQEVISPNIY 404

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  LW  SGHW  Y  NMF+ +       +  TFALKPMNCPGH  +F++  +S+RELP+
Sbjct: 405 NAKLWMTSGHWQHYAENMFSFE------AEKETFALKPMNCPGHCLIFDNRNRSWRELPL 458

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+A+FG ++RNE SG+L GL RVR F QDDAH+FCT EQ+ +E       +  +Y  FGF
Sbjct: 459 RMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCTPEQIKSEMKGCLEFLHHVYTIFGF 518

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
              +V LSTRP+  +G    W+ AE  +   L+      ++        G+GAFYGPK +
Sbjct: 519 SFQLV-LSTRPDNYLGELEQWNAAEKALAESLNEFGMPWKE------NPGDGAFYGPKID 571

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
             + DA+ R  QC TIQ+DF LP RFN  Y+    EK  PV+IHRA+ GS+ER I I+ E
Sbjct: 572 ITIMDALKRAHQCATIQLDFQLPIRFNLSYIADDGEKKRPVIIHRAILGSVERMIAILTE 631

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FRNETINYKIREHS 599
           NF G  P WLSP Q +V  +  +  +YAQ + + L +     E D    +T+N KIR   
Sbjct: 632 NFAGKWPFWLSPRQVMVVPVGPAYDQYAQSVRDQLHAAGFMSEADCDAGDTMNKKIRNAQ 691

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           + +   I++ GDKE S  ++ +R   +    +VS+ + I  L K
Sbjct: 692 LAQFNFILVVGDKERSSNTVNVRTRDNKVHGEVSVAELITKLQK 735


>gi|46580942|ref|YP_011750.1| threonyl-tRNA synthetase [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120601757|ref|YP_966157.1| threonyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
 gi|81566250|sp|Q728R5|SYT_DESVH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|166987320|sp|A1VBB4|SYT_DESVV RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|46450362|gb|AAS97010.1| threonyl-tRNA synthetase [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120561986|gb|ABM27730.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Desulfovibrio
           vulgaris DP4]
 gi|311234632|gb|ADP87486.1| threonyl-tRNA synthetase [Desulfovibrio vulgaris RCH1]
          Length = 644

 Score =  624 bits (1609), Expect = e-176,   Method: Composition-based stats.
 Identities = 266/642 (41%), Positives = 393/642 (61%), Gaps = 20/642 (3%)

Query: 12  GSIKNFPVHATGSDVAE-SISRSLAKKAVAVAINGKVCDLSDPVREGS--IEIITPEDPR 68
           G +      A+  D  + ++S    K  +A  ++G + D++  V +G+  IE +  + P 
Sbjct: 7   GQMLEVASGASCGDALKGALSGKKFKNVLACRLDGGLVDITATVPDGTTTIEPVYADSPE 66

Query: 69  SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQE 128
            L +IRHS AHIMA AV+ ++P  +V IGP I++GFYYDFD E+PFS ++   IE++MQ+
Sbjct: 67  GLDLIRHSTAHIMACAVKRLFPAAKVTIGPSIDNGFYYDFDAERPFSPEDFEAIEREMQK 126

Query: 129 IIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           I+   +PF +  +  ++A  LFE   E YKVEI+  +P    V+LYR GE+ DLCRGPH+
Sbjct: 127 IVDAATPFERSEMPRDEAVALFEGMGETYKVEIIRDLPND-TVSLYRCGEFVDLCRGPHI 185

Query: 189 RSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRK 248
              G  K F KLM VAGAYWRGD   PMLSRIYGTA+   + L ++L+ +EE+++RDHRK
Sbjct: 186 PHAGFAKAF-KLMSVAGAYWRGDEKNPMLSRIYGTAFADAKTLKEHLHRIEEAKRRDHRK 244

Query: 249 LAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQ 306
           L +++DLF   ED   G++FWH KG  +   +  ++R   +K  Y+ +  PQ+L + LW+
Sbjct: 245 LGQQLDLFAFHEDVAPGMVFWHPKGMLVRTIIEDFLRKEHLKRRYDIVQGPQLLRRELWE 304

Query: 307 QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFG 366
           +SGH+D+YR NM+       T  D   + +KPMNC  H+ ++   ++SYR+LP R  E G
Sbjct: 305 KSGHYDNYRENMYF------TEIDENAYGVKPMNCLAHMLIYRSAIRSYRDLPKRFFELG 358

Query: 367 SVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK 426
            V+R+E SG LHGL+RVR FTQDDAH+ C  +Q+ +E + +  L+  +   FGF+  +  
Sbjct: 359 VVHRHEKSGVLHGLLRVRQFTQDDAHIICRPDQLEDEIIDVIALVRDLMNLFGFDYKVA- 417

Query: 427 LSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDA 486
           +STRPEK +GSD  W+ A N +   ++         I   +  G+GAFYGPK +  L D 
Sbjct: 418 VSTRPEKSIGSDEAWELATNALVKAVERAG------IPYTINEGDGAFYGPKIDVRLMDC 471

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNL 546
           IGR+WQC TIQ DF LP RF+  YV    E+  PVM+HRA+ GS+ERFIG++IE + G  
Sbjct: 472 IGREWQCSTIQCDFTLPERFDLVYVGQDGERHRPVMVHRAILGSLERFIGVLIEQYAGAF 531

Query: 547 PLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPII 606
           P WL+P+QA + T+T +  E+ +     L    + +E D RNE + YK+RE  ++KIP I
Sbjct: 532 PAWLAPVQARLLTVTDAQNEFVESARAALAKAGIRVEADVRNEKLGYKVREAQLEKIPYI 591

Query: 607 IICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
           ++ GDKE     + +R          SL + + +L  +   P
Sbjct: 592 LVVGDKEVEAGGVNVRLRTGENLGLKSLDEVVSLLESDCQEP 633


>gi|307169877|gb|EFN62386.1| Threonyl-tRNA synthetase, cytoplasmic [Camponotus floridanus]
          Length = 689

 Score =  624 bits (1609), Expect = e-176,   Method: Composition-based stats.
 Identities = 242/654 (37%), Positives = 371/654 (56%), Gaps = 24/654 (3%)

Query: 2   PSDIKLTFPDGSIKNF-PVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           P DI +T PDG   +      T  +VA++IS+ LA   V   +N ++ DL  P+  +  +
Sbjct: 47  PVDITVTLPDGKEVSAQSWRTTPYEVAKNISQGLADNTVIAKVNNELWDLDRPLEYDCKL 106

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDE 118
           +++  +D     V  HS AHI+ EA++ I+    +  GP IE+GFYYD    ++  S+ +
Sbjct: 107 QLLKFDDAEGRQVFWHSSAHILGEAMERIYGGC-LCYGPPIENGFYYDMYIGDKGISNTD 165

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
              +E   + I     PF +  ++ +   E+F+     +K+ I+         T+Y+ G 
Sbjct: 166 FPYLENMYKNIAKEKQPFERLVMTKKDLMEMFKY--NEFKIRIIAEKIHTPTTTVYKCGP 223

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLCRGPHVR TG++K   K+ K +  YW G++N   L RIYG ++   ++L ++  F 
Sbjct: 224 LIDLCRGPHVRHTGKIK-ALKITKNSSTYWEGNANAESLQRIYGISFPDTKQLKEWEKFQ 282

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
           EE+ KRDHRK+ +E +LF   E   G  F+  +G  I+ TL+ ++R + +   ++E+ +P
Sbjct: 283 EEAAKRDHRKIGKEQELFFFHELSPGSCFFQPRGAYIYNTLVEFIRSEYRKRGFQEVISP 342

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  LWQ SGHW  Y  NMF+         +  TFALKPMNCPGH  +F+   +S+RE
Sbjct: 343 NIYNSKLWQTSGHWQHYAENMFSFDV------EKETFALKPMNCPGHCMIFDVRCRSWRE 396

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+A+FG ++RNE SG+L GL RVR F QDDAH+FC+ EQ+ +E +     +  +Y  
Sbjct: 397 LPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCSVEQIKDEMIAALEFLRHVYGI 456

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF   +  LSTRPEK +GS  +WD AE  ++  L+             +   +GAFYGP
Sbjct: 457 FGFTFNLC-LSTRPEKYLGSLKVWDRAEKALEESLNAFGQPW------TLNPQDGAFYGP 509

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  L DA+ R  Q  TIQ+DF LP RFN  YVN + EK  PV+IHRA+ GS+ER I I
Sbjct: 510 KIDITLMDALKRAHQTATIQLDFQLPMRFNLSYVNENGEKTRPVIIHRAILGSVERMIAI 569

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FRNETINYKIR 596
           + E++ G  P WLSP QA+V  + S   EYA E+   L    + +E D   ++T+N KIR
Sbjct: 570 LTESYGGKWPYWLSPRQAMVVPVVSQFDEYAYEVKQKLWDAGVMVEVDTDSSDTLNKKIR 629

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT--KESLPP 648
              + +   I++ G+KE +  ++ IR   +    ++++ + I  L   KE+  P
Sbjct: 630 NAQLAQFNFILVVGEKERNAGTVNIRTRDNVVHGEMAVEELIAKLKIMKETRDP 683


>gi|296124433|ref|YP_003632211.1| threonyl-tRNA synthetase [Planctomyces limnophilus DSM 3776]
 gi|296016773|gb|ADG70012.1| threonyl-tRNA synthetase [Planctomyces limnophilus DSM 3776]
          Length = 736

 Score =  624 bits (1609), Expect = e-176,   Method: Composition-based stats.
 Identities = 265/711 (37%), Positives = 395/711 (55%), Gaps = 73/711 (10%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS--- 58
           PS +++  PDGS+K FP   T   +AESIS  LA+ A+A  +  KV DL  PV E +   
Sbjct: 8   PSVVQIQLPDGSVKEFPGDVTPLAIAESISPRLAQAAIAARVGEKVTDLKRPVSETTDVQ 67

Query: 59  ---IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFS 115
              ++I+T +D  SL V+RHSCAH+MA A+  ++P VQ+A GP+ + G+YYD D     S
Sbjct: 68  PVPVQILTEKDAASLGVLRHSCAHLMARAIMRVFPGVQLAFGPVKDQGYYYDLDLPHKLS 127

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE-SIPAKENVTLY 174
            D+ A+IE +MQ+++    PF +   + ++A  + E   +  K E ++  + ++  V+ Y
Sbjct: 128 EDDFARIEAEMQKLVEMAEPFERFITNRDEALAMLEGMGQKLKCEHIQIGLASEATVSFY 187

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
           RQGE+ DLCRGPH+   G++K F  L  VAGAYW+GD++   L R+YGTAW +Q++L  +
Sbjct: 188 RQGEFVDLCRGPHIPDAGRIKAFRLL-SVAGAYWKGDASGQQLQRVYGTAWFSQKDLDAH 246

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMR-RKIKDDYE 292
           L  + E+++RDHR L ++++LF I+ +   G+  W  KG  +   L  +++   +K  Y+
Sbjct: 247 LEQVNEAKRRDHRVLGKQLNLFSISPEVGAGLCLWLPKGATVRALLEEFIKGELLKRGYQ 306

Query: 293 EINTPQVLDQHLWQQSGHWDSYRA---------------NMFAVKCADDT---------- 327
            + TP +    L++ SGH+  YR                + +  K  D+           
Sbjct: 307 PVYTPHIGRVELYETSGHFPYYRDSQFTPLYGHDGGQLIDFWIRKLQDNAISEADEKSLL 366

Query: 328 -----------------------------IKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
                                         K    + LKPMNCP H  ++    +SYR+L
Sbjct: 367 ASAKILGVEIPEYAAASGNPAKIEVLRTWEKQQERYLLKPMNCPHHAQIYKSMQRSYRDL 426

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           PVRLAEFG+VYR+E SG L+G++RVRG TQDDAH+FCT EQ+  E      L+  +    
Sbjct: 427 PVRLAEFGTVYRHEQSGELNGMLRVRGLTQDDAHLFCTPEQVEEEFRATLQLVQFVLASV 486

Query: 419 GFEKIMVKLSTRPEK---RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           G E   V+LS R  K    VGS+  W  AE  ++GVL  +       +      GE AFY
Sbjct: 487 GLEDYRVQLSLRDPKSDKYVGSEENWQRAEASLRGVLTELN------LPFTAREGEAAFY 540

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KD IGR+WQ GT+Q+D+NLP RF   YV + ++   PVMIHRA FGS+ERF 
Sbjct: 541 GPKADFMVKDCIGREWQLGTVQLDYNLPERFQLEYVGADNQAHRPVMIHRAPFGSMERFT 600

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
           G++IE+F G  PLWL+P Q  V +I+     YA+E+    ++    + TD R   IN KI
Sbjct: 601 GMLIEHFAGAFPLWLAPEQVRVLSISDKFEGYAREVEREFRAAGFRVTTDLRGAKINGKI 660

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           R+  I+ IP +++ G K+   R++ IR         V L +AI  L +E  
Sbjct: 661 RDAQIELIPYMLVVGGKDQENRTVSIRDRIEGDLGAVPLAEAITRLQQEVT 711


>gi|329113775|ref|ZP_08242547.1| Threonyl-tRNA synthetase [Acetobacter pomorum DM001]
 gi|326696901|gb|EGE48570.1| Threonyl-tRNA synthetase [Acetobacter pomorum DM001]
          Length = 640

 Score =  624 bits (1608), Expect = e-176,   Method: Composition-based stats.
 Identities = 298/629 (47%), Positives = 419/629 (66%), Gaps = 14/629 (2%)

Query: 19  VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSC 77
              + + +A   +    K  +A  ++G + D S  +  +   E +   D  +L++IRH  
Sbjct: 14  SPMSSTTIASRSASYSPKDVLARRVDGALFDHSTLLSGDRPSEPVFRSDADALSLIRHDT 73

Query: 78  AHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFL 137
           AH++A+AV  ++P   +A GP  E GF+YDF  E+ F+ D+L +IE +M EI+ RD P +
Sbjct: 74  AHVLAQAVSELFPGTALATGPATEQGFFYDFAAERAFTDDDLVRIEARMHEIVDRDEPII 133

Query: 138 KQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
           ++    + A    +   + YK EI+ S+PA   ++ YRQG + DLCRGPH+ STGQ+   
Sbjct: 134 REEWKRKSALAWCQENGQPYKAEIIRSLPADAVLSFYRQGNFVDLCRGPHLGSTGQIGHE 193

Query: 198 FKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFH 257
           F+L+  AGAYW+GD N PML RI+GTA     EL  +    EE+ +RDHR+L REMDLFH
Sbjct: 194 FRLLGTAGAYWKGDRNNPMLQRIHGTACRDANELAAWEQRQEEAARRDHRRLGREMDLFH 253

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
              +  G +FWH  GW +FQTL++Y+R R+  ++Y EINTP ++D  LWQ SGHW+ +  
Sbjct: 254 FQPEAPGAVFWHPNGWTLFQTLLAYLRARQQAENYVEINTPDIMDLSLWQASGHWEKFGE 313

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
           NMF       T  + RT+ALKPMNCPG V VF HGLKSYR+LP+R+AEFG V+R EPSG+
Sbjct: 314 NMFT------TETEGRTYALKPMNCPGGVQVFRHGLKSYRDLPLRMAEFGKVHRFEPSGA 367

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
           LHGLMRVR FTQDDAH+FCT EQM  E  +I +L++SIYKDFGF  + +K S RPEKRVG
Sbjct: 368 LHGLMRVRAFTQDDAHIFCTPEQMEAETQRICHLVLSIYKDFGFNNVRIKFSDRPEKRVG 427

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
           SD +WD +E+ ++  ++         ++     GEGAFYGPK E++L+DAIGRDWQCGT+
Sbjct: 428 SDEIWDRSEDALRRGVEASG------LSYTRNPGEGAFYGPKLEFVLRDAIGRDWQCGTV 481

Query: 497 QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI 556
           QVD NLP R +A YV +  +K  PVM+HRA+FGS+ERFIGI++E+  G+LP WL+P+Q +
Sbjct: 482 QVDLNLPQRLDAHYVGADGDKHPPVMLHRALFGSLERFIGILLEHHAGHLPFWLAPVQVV 541

Query: 557 VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASE 616
           V TIT++A EYA ++   L+   + +  D RNE I YKIREHS+ K+P+++I G KEA  
Sbjct: 542 VATITAAADEYADDLIKALRQRGVRVVPDLRNEKIAYKIREHSLAKVPVLLIVGKKEAQA 601

Query: 617 RSIGIRRFGSTTTQKVSLLDAIPILTKES 645
            ++ IR +G+     +++  AI +L   S
Sbjct: 602 GTVSIREYGNPDAPTIAMETAINLLADAS 630


>gi|73954351|ref|XP_536509.2| PREDICTED: similar to threonyl-tRNA synthetase [Canis familiaris]
          Length = 789

 Score =  624 bits (1608), Expect = e-176,   Method: Composition-based stats.
 Identities = 242/657 (36%), Positives = 364/657 (55%), Gaps = 32/657 (4%)

Query: 2   PSDIKLTFPDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
              IK+T PDG   N      T   +A  IS+ LA   V   +N  V DL  P+  + ++
Sbjct: 137 SKPIKVTLPDGKQVNAESWKTTPYQIACGISQGLADNTVIAKVNQVVWDLDRPLEEDCTL 196

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQP-FSSDE 118
           E++  ED  + AV  HS AHIM EA++ ++    +  GP IE+GFYYD   E+   SS++
Sbjct: 197 ELLKFEDEEAQAVYWHSSAHIMGEAMERVYGGC-LCYGPPIENGFYYDMYLEEGGVSSND 255

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
            + +E   ++II     F +  +  E   E+F+     +K  IL         T+YR G 
Sbjct: 256 FSSLEALCKKIIKEKQTFERLEVKKETLLEMFKY--NKFKCRILNEKVNTPTTTVYRCGP 313

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLCRGPHVR TG++K   K+ K +  YW G ++   L RIYG ++   + L ++  F 
Sbjct: 314 LIDLCRGPHVRHTGKIKTL-KIHKNSSTYWEGKADMETLQRIYGISFPDPKMLKEWEKFQ 372

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
           EE++ RDHRK+ R+ +L+   E   G  F+  KG  I+ TLI ++R + +   ++E+ TP
Sbjct: 373 EEAKNRDHRKIGRDQELYFFHELSPGSCFFLPKGAYIYNTLIEFIRSEYRKRGFQEVVTP 432

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  LW  SGHW  Y  NMF+ +       +   FALKPMNCPGH  +F+H  +S+RE
Sbjct: 433 NIYNSRLWMTSGHWQHYSENMFSFEV------EKELFALKPMNCPGHCLMFDHRPRSWRE 486

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+A+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E     + + ++Y  
Sbjct: 487 LPLRIADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAIEQIEDEIKGCLDFLRTVYSI 546

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF   +  LSTRPEK +G   +W+ AE  ++  L+      +      +  G+GAFYGP
Sbjct: 547 FGFSFKLN-LSTRPEKYLGDIEVWNQAEKQLENSLNEFGEKWE------LNPGDGAFYGP 599

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIG 536
           K +  +KDAIGR  QC TIQ+DF LP RFN  +V+    +K  PV++HRA+ GS+ER I 
Sbjct: 600 KIDIQIKDAIGRFHQCATIQLDFQLPIRFNLTFVSHDGDDKKRPVIVHRAILGSVERMIA 659

Query: 537 IMIENFKGNL---------PLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR 587
           I+ EN+ G           P WLSP Q +V  +  +  EYAQ++          ++ D  
Sbjct: 660 ILTENYGGKWWFKASSGTMPFWLSPRQVMVVPVGPTCDEYAQKVRQQFHDAKFMVDIDLD 719

Query: 588 -NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              T+N KIR   + +   I++ G+KE +  ++ IR   +    + ++L+ I  L +
Sbjct: 720 PGCTLNKKIRNAQLAQYNFILVIGEKEKASGTVNIRTRDNKVHGERTILETIERLQQ 776


>gi|194861340|ref|XP_001969762.1| GG23767 [Drosophila erecta]
 gi|190661629|gb|EDV58821.1| GG23767 [Drosophila erecta]
          Length = 746

 Score =  624 bits (1608), Expect = e-176,   Method: Composition-based stats.
 Identities = 241/644 (37%), Positives = 363/644 (56%), Gaps = 22/644 (3%)

Query: 5   IKLTFPDGS-IKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           IK+T PDG  +       T  +VA  IS+ LA   V   +NG+V DL   +    +++++
Sbjct: 108 IKVTLPDGKQVDATSWETTPYEVARGISQGLADNTVISKVNGEVWDLDRVLEGNCTLQLL 167

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQ 121
             +DP + AV  HS AHIM EA++ I+    +  GP IE+GFYYD   E +  S+++   
Sbjct: 168 KFDDPEAQAVFWHSSAHIMGEAMERIYGGH-LCYGPPIENGFYYDMHLEGEGISTNDYGA 226

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +E  +++I+     F +  +      E+F+     +KV IL      +  T+Y+ G   D
Sbjct: 227 MEGLVKQIVKEKQNFERLEMKKSDLLEMFKY--NEFKVRILNEKVTTDRTTVYKCGSLID 284

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHVR TG+VK   K+ K +  YW G ++   L R+YG ++   ++L ++    EE+
Sbjct: 285 LCRGPHVRHTGKVK-ALKITKNSSTYWEGKADAETLQRVYGISFPDPKQLKEWEKLQEEA 343

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVL 300
            KRDHRK+ RE +LF   E   G  F+  +G  I+ TL+ +++ + +   ++E+ +P + 
Sbjct: 344 AKRDHRKIGREQELFFFHELSPGSCFFQPRGAHIYNTLMGFIKSEYRKRGFQEVISPNIY 403

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  LW  SGHW  Y  NMF+ +       +  TFALKPMNCPGH  +F++  +S+RELP+
Sbjct: 404 NAKLWMTSGHWQHYAENMFSFE------AEKETFALKPMNCPGHCLIFDNRNRSWRELPL 457

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+A+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E       +  +Y  FGF
Sbjct: 458 RMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAPEQIKSEMKGCLEFLKYVYTIFGF 517

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
              +V LSTRP+  +G    W+DAE  +   L+      ++        G+GAFYGPK +
Sbjct: 518 SFQLV-LSTRPDNYLGELEQWNDAEKALAESLNEFGMPWKE------NPGDGAFYGPKID 570

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
             + DA+ R  QC TIQ+DF LP RFN  Y+    EK  PV+IHRA+ GS+ER I I+ E
Sbjct: 571 ITIMDALKRAHQCATIQLDFQLPIRFNLSYIADDGEKKRPVIIHRAILGSVERMIAILTE 630

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FRNETINYKIREHS 599
           NF G  P WLSP Q +V  +  +  +YAQ + + L       E D    +T+N KIR   
Sbjct: 631 NFAGKWPFWLSPRQVMVVPVGPAYDQYAQSVRDQLHDAGFMSEADCDAGDTMNKKIRNAQ 690

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           + +   I++ GDKE S  ++ +R   +    +VS+ + I  L K
Sbjct: 691 LAQFNFILVVGDKERSSNTVNVRTRDNKVHGEVSVAELITKLQK 734


>gi|227485697|ref|ZP_03916013.1| threonine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172]
 gi|227236252|gb|EEI86267.1| threonine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172]
          Length = 640

 Score =  624 bits (1608), Expect = e-176,   Method: Composition-based stats.
 Identities = 268/645 (41%), Positives = 393/645 (60%), Gaps = 17/645 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEII 62
            IK+  PD S+K +       DV + IS  L + AV   +NGKV   ++P+ E S   ++
Sbjct: 1   MIKIKLPDDSVKEYEKGVLVGDVTKDISMGLYRAAVGAVVNGKVMGYAEPIEEDSDFRVV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
             ED     +  H+ +H+MA A++ +WPE + AIGP I DGFYYD D E  F+ ++L QI
Sbjct: 61  KFEDAEGKEIFWHTTSHVMAAAIKELWPETKFAIGPAIADGFYYDMDLEHRFTPEDLEQI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE-WFD 181
           EKKM+EI  +D    +  +S ++A ++F+ + + YKVE++E +P  E +TLY+ G+ + D
Sbjct: 121 EKKMKEIAKKDLKLERIEVSRDEALKMFKEEGQDYKVELIEDLPKDELITLYKIGDAFTD 180

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ ST ++K   KL  +AGAYWRGDS++ ML RIYG ++   ++L +Y    +E 
Sbjct: 181 LCRGPHLESTKEIK-AIKLKAIAGAYWRGDSDKAMLQRIYGISFPKAKDLEEYEELQKEI 239

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVL 300
            +RDHRK+ +EMDLF   E+G G  F+H  G  +   L+ + R  +    Y EI TP +L
Sbjct: 240 ARRDHRKIGKEMDLFAFHEEGPGFPFFHPNGMILMNELLGWWRDVLDHSGYGEIKTPLIL 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ LW +SGHWD Y+ NM+  K       D   +A+KPMNCPG V  +     SYR+LP+
Sbjct: 300 NEDLWHRSGHWDHYKENMYFTKI------DDEDYAIKPMNCPGSVLTYASRQHSYRDLPI 353

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLAEFG V+R+E SG+LHGL RVR FTQDDAHV+C   Q+  E  K+ +L   +Y  FGF
Sbjct: 354 RLAEFGQVHRHELSGTLHGLFRVRTFTQDDAHVYCLPSQIKEEVYKMIDLADLLYSTFGF 413

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           +  M +LSTRP+  +G    WD AE  +K  L+      +  I+  +  G+GAFYGPK +
Sbjct: 414 KYTM-ELSTRPDDYMGDIKDWDFAEEQLKLALE------ERGIDYQINPGDGAFYGPKID 466

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           + L DA  R+WQCGTIQ+DF LP+ F   Y++ + EK  PVM+HRA+ GS+ERFIG++ E
Sbjct: 467 FHLLDAAKREWQCGTIQLDFQLPANFELEYIDENGEKKRPVMLHRALLGSVERFIGVLTE 526

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +F G  PLW++P Q  V  +     + A EIA  ++     +  D R+E + YKIR   +
Sbjct: 527 HFAGRFPLWINPRQVEVIPVADRFADKAHEIAKEIEKAGFRVGVDERSEGVGYKIRSAQM 586

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
            +   +++ GDKE     + +R      T+ V+L D I  +++E 
Sbjct: 587 MRTNYMLVVGDKEIESGLLTVRNRDGEETKDVNLADFIAKISEER 631


>gi|12845562|dbj|BAB26799.1| unnamed protein product [Mus musculus]
          Length = 722

 Score =  623 bits (1607), Expect = e-176,   Method: Composition-based stats.
 Identities = 239/648 (36%), Positives = 360/648 (55%), Gaps = 23/648 (3%)

Query: 2   PSDIKLTFPDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
              IK+T PDG   +      T   +A  IS+ LA   V   +N  V DL  P+  + ++
Sbjct: 79  SKPIKVTLPDGKQVDAESWKTTPYQIACGISQGLADNTVVAKVNKVVWDLDRPLETDCTL 138

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQP-FSSDE 118
           E++  ED  + AV  HS AHIM EA++ ++    +  G  IE+GFYYD   E+   SS++
Sbjct: 139 ELLKFEDEEAQAVYWHSSAHIMGEAMERVYGGC-LCYGSPIENGFYYDMYLEEGGVSSND 197

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
            + +E   ++II     F +  +  E   E+F+     +K  IL         T+YR G 
Sbjct: 198 FSSLETLCKKIIKEKQTFERLEVKKETLLEMFKY--NKFKCRILNEKVNTPTTTVYRCGP 255

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLCRGPHVR TG+ K   K+ K +  YW G ++   L RIYG ++   + L ++  F 
Sbjct: 256 LIDLCRGPHVRHTGKTKTL-KIHKNSSTYWEGKADMETLQRIYGISFPDPKLLKEWEKFQ 314

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
           EE++ RDH K+ R+ +L+   E   G  F+  KG  I+ TL+ ++R + +   ++E+ TP
Sbjct: 315 EEAKNRDHGKIGRDQELYFFHELSPGSCFFLPKGAYIYNTLMEFIRSEYRKRGFQEVVTP 374

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  LW  SGHW  Y  NMF+ +       +   FALKPMNCPGH  +F+H  +S+RE
Sbjct: 375 NIFNSRLWMTSGHWQHYSENMFSFEV------EKEQFALKPMNCPGHCLMFDHRPRSWRE 428

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+RLA+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E     + + ++Y  
Sbjct: 429 LPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSV 488

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF   +  LSTRPEK +G   +W+ AE  ++  L+      +      +  G+GAFYGP
Sbjct: 489 FGFSFKLN-LSTRPEKFLGDIEIWNQAEKQLENSLNEFGEKWE------LNPGDGAFYGP 541

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIG 536
           K +  +KDAIGR  QC TIQ+DF LP RFN  YV+    +K  PV++HRA+ GS+ER I 
Sbjct: 542 KIDIQIKDAIGRYHQCATIQLDFQLPIRFNLTYVSHDGDDKKRPVIVHRAILGSVERMIA 601

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKI 595
           I+ EN+ G  P WLSP Q +V  +  +  EYAQ++           +TD     T+N KI
Sbjct: 602 ILTENYGGKWPFWLSPRQVMVVPVGPTCDEYAQKVRQQFHDAKFMADTDLDPGCTLNKKI 661

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           R   + +   I++ G+KE +  ++ IR   +    + ++ + +  L +
Sbjct: 662 RNAQLAQYNFILVVGEKEKASGTVNIRTRDNKVHGERTVEETVRRLQQ 709


>gi|149499809|ref|XP_001513531.1| PREDICTED: similar to threonyl-tRNA synthetase-like 2, partial
           [Ornithorhynchus anatinus]
          Length = 677

 Score =  623 bits (1607), Expect = e-176,   Method: Composition-based stats.
 Identities = 244/645 (37%), Positives = 361/645 (55%), Gaps = 23/645 (3%)

Query: 5   IKLTFPDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           I++T  DG +        T   VA  IS +LA   V   +NG++ DL  P+  + ++E++
Sbjct: 37  IQITLTDGKVIEGESWKTTSYQVAAEISPALADNTVIAKVNGELWDLDRPLEGDSTLELL 96

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQ 121
           T E+  + AV  HS AHI+ EA+++ +    +  GP IE+GFYYD   E +  SS E   
Sbjct: 97  TFENEEAQAVYWHSSAHILGEAMENYYGGC-LCYGPPIENGFYYDMFLEDRGVSSTEFPS 155

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +E   + II    PF +  +S E   ++F+     +K  IL         T+YR G   D
Sbjct: 156 LENSCKAIIKEKQPFERLEISKEILLDMFKY--NKFKCRILNEKVDTPTTTVYRCGPLID 213

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHVR TG++K   K++K +  YW G ++   L RIYG ++   + +  +  F EE+
Sbjct: 214 LCRGPHVRHTGKIKTL-KILKNSSTYWEGKADMETLQRIYGISFPDSKMMKTWEKFQEEA 272

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVL 300
           + RDHRK+ +E +LF   +   G  F+  +G  ++ TL+ ++R +    ++ E+ +P V 
Sbjct: 273 KNRDHRKIGKEQELFFFHDLSPGSCFFLPRGAFLYNTLLDFIREEYHKRNFTEVVSPNVY 332

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  LW+ SGHW  Y  NMF+         +  TFALKPMNCPGH  +F H  +S+RE+P+
Sbjct: 333 NSKLWETSGHWQHYSENMFSFDV------EKETFALKPMNCPGHCLMFAHRPRSWREMPI 386

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLA+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+  E       + S+Y  FGF
Sbjct: 387 RLADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCMMEQIEEEMKGCLQFLQSVYSVFGF 446

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
              +  LSTRPE  +G    WD AE  ++  L       +      +  G+GAFYGPK +
Sbjct: 447 SFQLN-LSTRPENFLGEIETWDQAEKQLQNSLKEFGEPWK------LNPGDGAFYGPKID 499

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIGIMI 539
             +KDAIGR  QC TIQ+DF LP RFN  YV+  S +K  PV+IHRA+ GS+ER I I+ 
Sbjct: 500 IKIKDAIGRYHQCATIQLDFQLPIRFNLTYVSKESDDKKRPVIIHRAILGSVERMIAILS 559

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FRNETINYKIREH 598
           EN+ G  P WLSP Q +V  +  +  EYAQ+I +         + D  ++ T+N KIR  
Sbjct: 560 ENYGGKWPFWLSPRQVMVIPVGPTCEEYAQQIRSEFFEAGFMADVDLDQSSTLNKKIRNA 619

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            + +   I++ G+KE    ++ +R   +    ++S+  AI  L K
Sbjct: 620 QLAQYNFILVVGEKEKGNNAVNVRTRDNKIHGEISVNSAIEKLKK 664


>gi|62897167|dbj|BAD96524.1| threonyl-tRNA synthetase variant [Homo sapiens]
          Length = 723

 Score =  623 bits (1607), Expect = e-176,   Method: Composition-based stats.
 Identities = 241/648 (37%), Positives = 358/648 (55%), Gaps = 23/648 (3%)

Query: 2   PSDIKLTFPDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
              IK+T PDG   +      T   +A  IS+ LA   V   +N  V DL  P+  + ++
Sbjct: 80  SKPIKVTLPDGKQVDAESWKTTPYQIACGISQGLADNTVIAKVNNVVWDLDRPLEEDCTL 139

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQP-FSSDE 118
           E++  ED  + AV  HS AHIM EA++ ++    +  GP IE+GFYYD   E+   SS++
Sbjct: 140 ELLKFEDEEAQAVYWHSSAHIMGEAMERVYGGC-LCYGPPIENGFYYDMYLEEGGVSSND 198

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
              +E   ++II     F +  +  E    +F+     +K  IL         T+YR G 
Sbjct: 199 FPSLEALCKKIIKEKQAFERLEVKKETLLAMFKY--NKFKCRILNEKVNTPTTTVYRCGP 256

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLCRGPHVR TG++K   K+ K +  YW G ++   L RIYG ++   + L ++  F 
Sbjct: 257 LIDLCRGPHVRHTGKIK-ALKIHKNSSTYWEGKADMETLQRIYGISFPDPKMLKEWEKFQ 315

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
           EE++ RDHRK+ R+ +L+   E   G  F+  KG  I+  LI ++R + +   ++E+ TP
Sbjct: 316 EEAKNRDHRKIGRDQELYFFHELSPGSCFFLPKGAYIYNALIEFIRSEYRKRGFQEVVTP 375

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  LW  SGHW  Y  NMF+ +       +   FALKPMNCPGH  +F+H  +S+RE
Sbjct: 376 NIFNSRLWMTSGHWQHYSENMFSFEV------EKELFALKPMNCPGHCLMFDHRPRSWRE 429

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+RLA+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E     + + ++Y  
Sbjct: 430 LPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSV 489

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF   +  LSTRPEK +G   +WD AE  ++  L+      +      +  G+GAFYGP
Sbjct: 490 FGFSFKLN-LSTRPEKFLGDIEVWDQAEKQLENSLNEFGEKWE------LNSGDGAFYGP 542

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIG 536
           K +  +KDAIGR  QC TIQ+DF LP RFN  YV+    +K  PV++HRA+ GS+ER I 
Sbjct: 543 KIDIQIKDAIGRYHQCATIQLDFQLPIRFNLTYVSHDGDDKKRPVIVHRAILGSVERMIA 602

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKI 595
           I+ EN+ G  P WLSP Q +V  +  +  EYAQ++           + D     T+N KI
Sbjct: 603 ILTENYGGKWPFWLSPRQVMVVPVGPTCDEYAQKVRQQFHDAKFMADIDLDPGCTLNKKI 662

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           R   + +   I++ G+KE    ++ IR   +    + ++ + I  L +
Sbjct: 663 RNAQLAQYNFILVVGEKEKISGTVNIRTRDNKVHGERTISETIERLQQ 710


>gi|225461914|ref|XP_002265484.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 745

 Score =  623 bits (1607), Expect = e-176,   Method: Composition-based stats.
 Identities = 228/650 (35%), Positives = 368/650 (56%), Gaps = 24/650 (3%)

Query: 3   SDIKLTFPDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIE 60
             IK+T PDG++K       T  D+A+ IS+ LA  A+   +NG + D+S  +  +  ++
Sbjct: 109 DPIKITLPDGTVKEGKKWETTPFDIAKEISKGLASNALISQVNGVLWDMSRALEGDCGLK 168

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII--EDGFYYD-FDKEQPFSSD 117
           + T +         HS AHI+ +A++  +   ++ IGP     +GFYYD F  E   + D
Sbjct: 169 LFTFDSDEGRDTFWHSSAHILGQALEMEY-GCKLCIGPCTTRGEGFYYDAFYGELGLNED 227

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
              QIE  + + +    PF +  +S  +A E+F     ++K+EI+  +P  + +T+YR G
Sbjct: 228 HFKQIESGVLKAVGEKQPFERIEVSRNQALEMFSE--NSFKIEIINDLPEDKTITVYRCG 285

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
              DLCRGPH+ +T  VK F   +K + AYWRG+ +R  L R+YG ++   + L +Y+  
Sbjct: 286 PLVDLCRGPHIPNTSFVKAF-ACLKASSAYWRGNRDRESLQRVYGISYPDSKRLKEYIAR 344

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
           +EE++K DHR L  + +LF       G  F+   G +I+  L+ +++ + ++  Y E+ +
Sbjct: 345 IEEAKKYDHRLLGVKQELFFCHPLSPGSWFFLPHGGRIYNKLMEFIKAQYRERGYHEVFS 404

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P + +  LW+ SGH  +Y+ NMF  +       + + F LKPMNCPGH  +F H ++SYR
Sbjct: 405 PTMYNMQLWETSGHAANYKENMFVFEV------EKQEFGLKPMNCPGHCLMFEHRVRSYR 458

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ELP+RLA+FG ++RNE SG+L GL RVR F QDDAH+FC + Q+ +E + + + I   Y 
Sbjct: 459 ELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVMGVLDFINYAYN 518

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
            FGF   + KLSTRPEK +G    W+ AE  +   L+      +      +  G+GAFYG
Sbjct: 519 IFGFTYEL-KLSTRPEKYLGDLETWEKAEAALTEALNQSGKPWE------INEGDGAFYG 571

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFI 535
           PK +  + DA+ R +QC T+Q+DF LPSRF+  Y      ++  PVMIHRA+ GS+ER  
Sbjct: 572 PKIDISVSDALNRKFQCATLQLDFQLPSRFDLSYSAEDEAKRERPVMIHRAILGSVERMF 631

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            I++E++KG  P WLSP QAIV  ++  +  YA ++ + +      ++ D  +  I  K+
Sbjct: 632 AILLEHYKGKWPFWLSPRQAIVCPVSEKSQPYALQVRDQIHQAGYYVDVDTTDRKIQKKV 691

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           RE  + +   I++ G++EA+ R + +R         +S+ + +     E+
Sbjct: 692 REAQLAQYNFILVVGEEEANTRQVSVRVRDKGDHSVMSMENLLSYFKSET 741


>gi|224370824|ref|YP_002604988.1| threonyl-tRNA synthetase [Desulfobacterium autotrophicum HRM2]
 gi|259516390|sp|C0QAP1|SYT_DESAH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|223693541|gb|ACN16824.1| ThrS2 [Desulfobacterium autotrophicum HRM2]
          Length = 636

 Score =  623 bits (1606), Expect = e-176,   Method: Composition-based stats.
 Identities = 263/638 (41%), Positives = 402/638 (63%), Gaps = 20/638 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +T PD SIK+F  +  G DVA  IS   A+  VA+ I+G++ DL   +  + ++ +I
Sbjct: 1   MINITLPDDSIKSFKEYPKGMDVARGISEGFARNCVAMEIDGQLLDLDVEIRNDCAVRLI 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T  D  ++ ++RHS AH+MAEAVQ++  + ++ IGP++EDGFYYD D   P S  +  +I
Sbjct: 61  TTRDAEAVEILRHSAAHVMAEAVQNLHADAKLTIGPVVEDGFYYDIDM-APISDADFPKI 119

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M +I+    PF +  ++ ++A ELF+     YKVE++  +   + +++Y+QG++ DL
Sbjct: 120 EAEMAKIVKAKKPFQRSEITKQEALELFK--DNPYKVELINGL-DDQTISIYQQGDFVDL 176

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+  TG +K   KLMK +GAYWR D  +  L R+YGTA+  ++EL  YL+ +EE++
Sbjct: 177 CRGPHIPHTGMIKGL-KLMKTSGAYWRADQEKAQLQRLYGTAFFDKKELKAYLHLIEEAK 235

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           KRDHRK+   M LF   ++ +G+ F+H KG +++  L++Y R + +   Y E  TP ++ 
Sbjct: 236 KRDHRKIGTRMGLFSFHQEAAGMPFFHAKGMEMWNELLAYWRDEHRAAGYVETKTPVMMS 295

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           +HLW++SGHW++YR NM+       ++ D   +A+KPMNCPG + ++     SYR+LP+R
Sbjct: 296 RHLWEKSGHWENYRENMYT------SVVDGEEYAIKPMNCPGGMLLYKTESHSYRDLPLR 349

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
             E G V+R+E SG+L GL RVR F QDDAH+F T EQ+ +E L +  L+  IY  FG  
Sbjct: 350 AGEIGLVHRHELSGALSGLFRVRAFHQDDAHIFMTPEQIESEILGVLELVERIYSRFGLG 409

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
             + +LSTRP+K +GSD  W +A N +K  LD             +  G+GAFYGPK + 
Sbjct: 410 FHL-ELSTRPKKSIGSDEQWAEATNGLKNALDKYGQP------YAINEGDGAFYGPKIDI 462

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+GR WQCGT+Q+D  LP RF+  Y  + +EK  P+MIHR ++GSIERF GI++E+
Sbjct: 463 HIKDALGRTWQCGTVQLDMALPERFDLTYKGADNEKHRPIMIHRVIYGSIERFFGILVEH 522

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           F G  PLWL+P+QA+V  I     ++AQ +   L+S+ +  + D R E++  KIRE  + 
Sbjct: 523 FAGKFPLWLAPVQAVVLPINDDLADHAQTVKKELESNGIRCDVDLRTESLKKKIREAQVN 582

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
            +P+II  G+KE    ++ +R         +S+ D IP
Sbjct: 583 YVPLIITIGEKEKESGTLSVRTLDGKVRMGLSMADFIP 620


>gi|24583839|ref|NP_723725.1| Threonyl-tRNA synthetase, isoform A [Drosophila melanogaster]
 gi|22946307|gb|AAF53166.2| Threonyl-tRNA synthetase, isoform A [Drosophila melanogaster]
 gi|211938559|gb|ACJ13176.1| FI05224p [Drosophila melanogaster]
          Length = 747

 Score =  623 bits (1606), Expect = e-176,   Method: Composition-based stats.
 Identities = 240/646 (37%), Positives = 362/646 (56%), Gaps = 22/646 (3%)

Query: 3   SDIKLTFPDGS-IKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIE 60
             IK+T PDG  +       T  +VA  IS+ LA   V   +NG+V DL   +    +++
Sbjct: 107 EPIKVTLPDGKQVDATSWETTPYEVARGISQGLADNTVISKVNGEVWDLDRVLEGNCTLQ 166

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDEL 119
           ++  +DP + AV  HS AHIM EA++ I+    +  GP IE+GFYYD   E +  S+++ 
Sbjct: 167 LLKFDDPEAQAVFWHSSAHIMGEAMERIYGGH-LCYGPPIENGFYYDMHLEGEGISTNDY 225

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             +E  +++I+     F +  +      E+F+     +KV IL      +  T+Y+ G  
Sbjct: 226 GAMEGLVKQIVKEKQNFERLEMKKSDLLEMFKY--NEFKVRILNEKVTTDRTTVYKCGSL 283

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHVR TG+VK   K+ K +  YW G ++   L R+YG ++   ++L ++    E
Sbjct: 284 IDLCRGPHVRHTGKVK-ALKITKNSSTYWEGKADAETLQRVYGISFPDPKQLKEWEKLQE 342

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+ KRDHRK+ RE +LF   E   G  F+  +G  I+ TL+ +++ + +   ++E+ +P 
Sbjct: 343 EAAKRDHRKIGREQELFFFHELSPGSCFFQPRGAHIYNTLMGFIKAEYRKRGFQEVISPN 402

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           + +  LW  SGHW  Y  NMF+ +       +   FALKPMNCPGH  +F++  +S+REL
Sbjct: 403 IYNAKLWMTSGHWQHYAENMFSFE------AEKEKFALKPMNCPGHCLIFDNRNRSWREL 456

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+A+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E       +  +Y  F
Sbjct: 457 PLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAPEQIKSEMKGCLEFLKYVYTIF 516

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF   +V LSTRP+  +G    W+DAE  +   L+      ++        G+GAFYGPK
Sbjct: 517 GFSFQLV-LSTRPDNYLGELEQWNDAEKALAESLNEFGMPWKE------NPGDGAFYGPK 569

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +  + DA+ R  QC TIQ+DF LP RFN  Y+    EK  PV+IHRA+ GS+ER I I+
Sbjct: 570 IDITIMDALKRAHQCATIQLDFQLPIRFNLSYIADDGEKKRPVIIHRAILGSVERMIAIL 629

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FRNETINYKIRE 597
            ENF G  P WLSP Q +V  +  +  +YAQ + + L       E D    +T+N KIR 
Sbjct: 630 TENFAGKWPFWLSPRQVMVVPVGPAYDQYAQSVRDQLHDAGFMSEADCDAGDTMNKKIRN 689

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             + +   I++ GDKE S  ++ +R   +    +VS+ + I  L K
Sbjct: 690 AQLAQFNFILVVGDKERSSNTVNVRTRDNKVHGEVSVAELITKLQK 735


>gi|332521036|ref|ZP_08397494.1| threonyl-tRNA synthetase [Lacinutrix algicola 5H-3-7-4]
 gi|332043129|gb|EGI79326.1| threonyl-tRNA synthetase [Lacinutrix algicola 5H-3-7-4]
          Length = 644

 Score =  623 bits (1606), Expect = e-176,   Method: Composition-based stats.
 Identities = 254/649 (39%), Positives = 383/649 (59%), Gaps = 21/649 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            I++T PDGS+K+F  ++T  DVA+SIS  LA+  ++ + NG   +   P+  +GS+ + 
Sbjct: 1   MIQITLPDGSVKSFETNSTPMDVAKSISEGLARNVISASFNGLTVETITPLTTDGSLILY 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
           T  +        HS AH++A+A+Q ++P  ++ IGP IE GFYYD D  +   +  +   
Sbjct: 61  TWNNDEGKKAFWHSSAHVLAQAIQELYPNAKLTIGPAIERGFYYDVDFGDDVLTDKDFKA 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +E KM EI      F  +  +  +A EL++     +K E+++++     +T      + D
Sbjct: 121 VENKMLEIARGKHDFNMRSATKAEALELYK--NNPFKTELIQNL-EDGTITFCDHSTFTD 177

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG H+ +TG +K   K++ VAGAYWRGD  +P L+R+YG ++  Q+ELT+YL  LEE+
Sbjct: 178 LCRGGHIPNTGIIK-AVKVLSVAGAYWRGDETKPQLTRVYGISFPKQKELTEYLALLEEA 236

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           +KRDHRKL +E++LF  ++    G+  W  KG  + + L ++++  + K  YE + +P +
Sbjct: 237 KKRDHRKLGKELELFTFSQKVGAGLPLWLPKGTALRERLENFLKAAQKKAGYEMVMSPHI 296

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             + L+  SGH+  Y  + F       T KD   F LKPMNCP H  ++N    SY++LP
Sbjct: 297 GQKELYVTSGHYAKYGEDSFQ---PIKTPKDDEEFLLKPMNCPHHCEIYNASQWSYKDLP 353

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
            R AEFG+VYR E SG LHGL RVRGFTQDDAH+FCT +Q+  E   + +L++ ++   G
Sbjct: 354 KRYAEFGTVYRYEQSGELHGLTRVRGFTQDDAHLFCTPDQLDAEFKNVIDLVLYVFGSLG 413

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           FE    ++S R  +     +GS   W+ AE  +              +N  +  GE AFY
Sbjct: 414 FENFTAQVSLRDPENPEKYIGSLENWEKAEQAIISAAKD------KGLNYVIETGEAAFY 467

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDA+GR WQ GTIQVD+NLP RF+  Y  S +E   PVMIHRA FGS+ERFI
Sbjct: 468 GPKLDFMVKDALGRQWQLGTIQVDYNLPERFDLTYKGSDNELHRPVMIHRAPFGSMERFI 527

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            I++E+  GN PLWL P Q  + T++    +Y +++ NLL++H +    D R+ETI  KI
Sbjct: 528 AILLEHTGGNFPLWLMPNQVSILTLSEKYEKYGEKVLNLLENHEIRALIDNRSETIGKKI 587

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           RE  + K P +II G+ E  E  I +R+ G      +S+ D   I+  E
Sbjct: 588 REAEMNKTPYMIIIGENEEKENKISVRQHGGEDLGTISVEDFSEIVKTE 636


>gi|256844949|ref|ZP_05550407.1| threonyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
 gi|256718508|gb|EEU32063.1| threonyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
          Length = 637

 Score =  623 bits (1606), Expect = e-176,   Method: Composition-based stats.
 Identities = 283/640 (44%), Positives = 403/640 (62%), Gaps = 17/640 (2%)

Query: 11  DGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRS 69
           +G  K F  +    ++A+  S SLAKK+V   ++GK  D+S  +  +  +E I  + P  
Sbjct: 6   NGESKEFNNNINMFEIAKGFSNSLAKKSVGAKVDGKNVDMSYVLDHDADVEFIDIDSPEG 65

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
             ++RHS AH+MA+AV  ++P+ +V IGP+IE+GFYYDFD  + F+ ++L +IE +M+ I
Sbjct: 66  EDIVRHSTAHLMAQAVLRLYPDTKVTIGPVIENGFYYDFDPVEQFTEEDLEKIEAEMKRI 125

Query: 130 IARDSPFLKQYLSHEKARELFES-KKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           +  +    K  L  ++A + F    K  YKVEI+E+IP  E V+ Y+QG++ DLCRG HV
Sbjct: 126 VKENIKLEKYVLPRDEAIDYFRDVDKNKYKVEIVEAIPQGEQVSFYKQGDFTDLCRGTHV 185

Query: 189 RSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRK 248
            STG +K F KL  VAGAYWRG+S   ML RIYG +++ +  L ++L  +EE+EKRDHRK
Sbjct: 186 PSTGYLKAF-KLRTVAGAYWRGNSKNKMLQRIYGYSFSNEDRLKKHLKLMEEAEKRDHRK 244

Query: 249 LAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQ 307
           L +E++LF ++E G G  F+  KG  I   LI   R++ +   Y ++ TP +L++ LW+ 
Sbjct: 245 LGKELELFFLSEYGPGFPFFLPKGMIIRNVLIDLWRKEHEKAGYLQLETPIMLNKELWEI 304

Query: 308 SGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGS 367
           SGHW +YR NM+  +       D   FA+KPMNCPG V  F H L SY++LP RLAE G 
Sbjct: 305 SGHWFNYRENMYTSEI------DELEFAIKPMNCPGGVLSFKHQLHSYKDLPARLAELGR 358

Query: 368 VYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKL 427
           V+R+E SG+LHGLMRVR FTQDD+H+F T +Q+ +E + + NLI   Y      +  ++L
Sbjct: 359 VHRHEFSGALHGLMRVRSFTQDDSHIFMTPDQVQDEIIGVVNLIDKFYSKLFGFEYEIEL 418

Query: 428 STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAI 487
           ST+PEK +GS  +WD AE  + G LD +           +  G+GAFYGPK ++ +KDAI
Sbjct: 419 STKPEKAIGSQEIWDMAEAALAGALDKLGR------KYKINPGDGAFYGPKLDFKIKDAI 472

Query: 488 GRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           GR WQCGTIQ+DFNLP RF+  Y+    EK  PVM+HR ++GSIERFIGI+IE++ G   
Sbjct: 473 GRMWQCGTIQLDFNLPERFDVTYIGEDGEKHRPVMLHRVIYGSIERFIGILIEHYAGAFS 532

Query: 548 LWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH-SIKKIPII 606
           +WL+P+Q  V T+    + YA+EI + L+   +  E D RNETI YKIRE     KIP+ 
Sbjct: 533 MWLAPVQVKVLTLNDECIPYAKEIMDKLEELGIRAELDDRNETIGYKIREANGKYKIPMQ 592

Query: 607 IICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           +I G  E   + + IRRFGS       L +    +  E+ 
Sbjct: 593 LIIGKNEVENKEVNIRRFGSKDQFSKPLNEFYTYVVDEAT 632


>gi|281341862|gb|EFB17446.1| hypothetical protein PANDA_008118 [Ailuropoda melanoleuca]
          Length = 678

 Score =  623 bits (1606), Expect = e-176,   Method: Composition-based stats.
 Identities = 241/648 (37%), Positives = 364/648 (56%), Gaps = 23/648 (3%)

Query: 2   PSDIKLTFPDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
              IK+T PDG   N      T   +A  IS+ LA   V   +N  V DL  P+  + ++
Sbjct: 35  SKPIKVTLPDGKQVNAESWKTTPYQIAYGISQGLADNTVIAKVNQVVWDLDRPLEEDCTL 94

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQP-FSSDE 118
           E++  ED  + AV  HS AHIM EA++ ++    +  GP IE+GFYYD   E+   SS++
Sbjct: 95  ELLKFEDEEAQAVYWHSSAHIMGEAMERVYGGC-LCYGPPIENGFYYDMYLEEGGVSSND 153

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
            + +E   ++II     F +  +  E   E+F+     +K  IL         T+YR G 
Sbjct: 154 FSSLEALCKKIIKEKQAFERLEVKKETLLEMFKY--NKFKCRILNEKVNTPTTTVYRCGP 211

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLCRGPHVR TG++K   K+ K +  YW G ++   L RIYG ++   + L ++  F 
Sbjct: 212 LIDLCRGPHVRHTGKIKTL-KIHKNSSTYWEGKADMETLQRIYGISFPDPKMLKEWEKFQ 270

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
           EE++ RDHRK+ R+ +L+   E   G  F+  KG  I+ TLI ++R + +   ++E+ +P
Sbjct: 271 EEAKNRDHRKIGRDQELYFFHELSPGSCFFLPKGAYIYNTLIEFIRSEYRKRGFQEVVSP 330

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  LW  SGHW  Y  NMF+ +       +   FALKPMNCPGH  +F+H  +S+RE
Sbjct: 331 NIYNSRLWMTSGHWQHYSENMFSFEV------EKELFALKPMNCPGHCLMFDHRPRSWRE 384

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+A+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E     + + ++Y  
Sbjct: 385 LPLRIADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAIEQIEDEIKGCLDFLRTVYNV 444

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF   +  LSTRPEK +G   +W+ AE  ++  L+      +      +  G+GAFYGP
Sbjct: 445 FGFSFKLN-LSTRPEKFLGDIEVWNQAEKQLENSLNEFGEKWE------LNPGDGAFYGP 497

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIG 536
           K +  +KDAIGR  QC TIQ+DF LP RFN  +V+    +K  PV++HRA+ GS+ER I 
Sbjct: 498 KIDIQIKDAIGRYHQCATIQLDFQLPIRFNLTFVSHDGDDKKRPVIVHRAILGSVERMIA 557

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKI 595
           I+ ENF G  P WLSP Q +V  +  +  EYAQ++         +++ D     T+N KI
Sbjct: 558 ILTENFGGKWPFWLSPRQVMVVPVGPTCDEYAQKVRQQFHDAKFTVDIDLDPGCTLNKKI 617

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           R   + +   I++ G+KE +  ++ IR   +    + ++ + I  L +
Sbjct: 618 RNAQLAQYNFILVIGEKEKASGTVNIRTRDNKVHGERTISETIERLQQ 665


>gi|317052582|ref|YP_004113698.1| threonyl-tRNA synthetase [Desulfurispirillum indicum S5]
 gi|316947666|gb|ADU67142.1| threonyl-tRNA synthetase [Desulfurispirillum indicum S5]
          Length = 657

 Score =  623 bits (1606), Expect = e-176,   Method: Composition-based stats.
 Identities = 273/646 (42%), Positives = 406/646 (62%), Gaps = 19/646 (2%)

Query: 7   LTFPDGSIKNFPV-HATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITP 64
           +T PDG+ K+F     T  +VA SI R LAK AV+  ++G + D++ P+  + ++EIIT 
Sbjct: 4   ITLPDGTQKHFEHSPVTPMEVALSIGRRLAKDAVSARVDGVLVDMNTPLTADATLEIITA 63

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPE--VQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
                L V+RHS +HIMA+AV+ ++    V+VAIGP   +GFYYDFD E     ++L +I
Sbjct: 64  SSAEGLDVLRHSASHIMAQAVKDLFGGDKVKVAIGPSTSEGFYYDFDMEHRLVPEDLEKI 123

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M EI A D PF+ + +   +A   F+ + E +KVE+L+     + V +Y+QG + DL
Sbjct: 124 ETRMAEIAAADQPFVCRKMERAEAINTFKQQGELFKVELLQQDILDDQVGIYQQGSFLDL 183

Query: 183 CRGPHVRSTGQVKKF-FKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           CRGPH+ STG++    FKL+ +AGAYWRGD  RPML RIYGTA+ T++EL +YL+FLEE+
Sbjct: 184 CRGPHIPSTGKLGAGSFKLLSIAGAYWRGDEKRPMLQRIYGTAFATEKELREYLFFLEEA 243

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQV 299
           +KRDHRKL +E+DLFH   + +    F+H KG  ++  L+ ++R       Y E+ TPQV
Sbjct: 244 KKRDHRKLGKELDLFHFDPEVAVASPFFHPKGTVVYNQLLEFIREMYRYYGYGEVITPQV 303

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           +D  LW++SGH+D+Y  NM+  +       D +  ALKPMNCP HV ++    +SYR+LP
Sbjct: 304 MDVELWKRSGHYDNYVENMYFTEL------DGQHNALKPMNCPTHVMIYGASSRSYRDLP 357

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           VR A+FG ++R E SG + GL RVR F QDDAH+FC  +Q+ +E   + +LI+  YK F 
Sbjct: 358 VRYADFGRLHRYERSGVVQGLTRVRTFCQDDAHIFCRPDQIEDEIKNLIDLILKTYKVFD 417

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           FE I + LSTRPEK +GSD +W  AE+ +   L+++       +   +  G+GAFYGPK 
Sbjct: 418 FEDIAIGLSTRPEKSIGSDEIWQKAESALAAALNSLS------VKFSINEGDGAFYGPKI 471

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           ++ ++DAI R WQ  T+Q+DF++P RF A YV+   ++  PVMIHRAV GSIERF+G+ +
Sbjct: 472 DFQVRDAIRRSWQLATVQLDFSMPQRFGASYVDEQGQRQAPVMIHRAVLGSIERFMGLYL 531

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E+  G LP WL+P+Q  +  +    + + Q++  +L      +E D  +E++  KIR   
Sbjct: 532 EHTAGALPFWLAPVQCSIIPVNDELLPFCQQLRQILTRLGYRVEVDASSESMGKKIRRSQ 591

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
            +K P  ++ G KE  ER   +R +G   T   S  + +    +E+
Sbjct: 592 TQKHPYTLVVGKKELEERIFAVRAYGHKDTFASSWEELLERFHQEN 637


>gi|301779664|ref|XP_002925249.1| PREDICTED: probable threonyl-tRNA synthetase 2, cytoplasmic-like
           [Ailuropoda melanoleuca]
          Length = 890

 Score =  623 bits (1606), Expect = e-176,   Method: Composition-based stats.
 Identities = 237/648 (36%), Positives = 355/648 (54%), Gaps = 23/648 (3%)

Query: 2   PSDIKLTFPDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
            + I +   DG          T   VA  IS   A+  V   +NG++ DL  P+  + ++
Sbjct: 247 SNVITVRVADGKTVEGEVWKTTPYQVAAEISPERAESTVVAKVNGELWDLDRPLEGDSTL 306

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDE 118
           E++T ++  + AV  HS AHI+ EA++  +    +  GP IE+GFYYD    ++  SS E
Sbjct: 307 ELLTFDNEEAQAVYWHSSAHILGEAMELYYGGH-LCYGPPIENGFYYDMFIGDRAVSSTE 365

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L+ +E   + II    PF +  +S E   E+F+     +K  IL         T+YR G 
Sbjct: 366 LSALENICKTIIKEKQPFERLEVSKEVLLEMFKY--NKFKCRILNEKVNTPTTTVYRCGP 423

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLC+GPHVR TG++K   K+ K +  YW G+     L RIYG ++   + +  +  F 
Sbjct: 424 LIDLCKGPHVRHTGKIKTI-KIFKNSSTYWEGNPEMETLQRIYGISFPDTKMMKTWEKFQ 482

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE++ RDHRK+ +E +LF   +   G  F+  +G  I+ TL+ ++R +    ++ E+ +P
Sbjct: 483 EEAKNRDHRKIGKEQELFFFHDLSPGSCFFLPRGAFIYNTLMDFIREEYHRRNFTEVLSP 542

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  LW+ SGHW  Y  NMF      DT      FALKPMNCPGH  +F H  +S+RE
Sbjct: 543 NMYNSRLWETSGHWQHYSENMFTFDIEKDT------FALKPMNCPGHCLIFAHRPRSWRE 596

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           +P+R A+FG ++RNE SG+L GL RVR F QDDAH+FCT EQ+  E       + S+Y  
Sbjct: 597 MPIRFADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCTVEQIEEEINGCLQFLQSVYST 656

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF   +  LSTRPE  +G   LWD+AE  ++  L       +      +  G+GAFYGP
Sbjct: 657 FGFSFQLN-LSTRPENFLGEVELWDEAEKQLQNSLVEFGKPWK------MNPGDGAFYGP 709

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH-PVMIHRAVFGSIERFIG 536
           K +  +KDAIGR  QC TIQ+DF LP RFN  YV+   +    PV+IHRA+ GS+ER I 
Sbjct: 710 KIDIKIKDAIGRYHQCATIQLDFQLPIRFNLTYVSKDGDDKRNPVIIHRAILGSVERMIA 769

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FRNETINYKI 595
           I+ EN+ G  P WLSP Q +V  +  +  +YA ++++         + D   + T+N KI
Sbjct: 770 ILSENYGGKWPFWLSPRQVMVIPVGPTCEKYALQVSSAFFEEGFMADVDLDHSCTLNKKI 829

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           R   + +   I++ G+KE +  ++ +R   +    ++S+  AI  L  
Sbjct: 830 RNAQLAQYNFILVVGEKEKTNNAVNVRTRDNKIHGEISVTSAIDKLKN 877


>gi|26326983|dbj|BAC27235.1| unnamed protein product [Mus musculus]
          Length = 722

 Score =  623 bits (1606), Expect = e-176,   Method: Composition-based stats.
 Identities = 240/648 (37%), Positives = 362/648 (55%), Gaps = 23/648 (3%)

Query: 2   PSDIKLTFPDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
              IK+T PDG   +      T   +A  IS+ LA   V   +N  V DL  P+  + ++
Sbjct: 79  SKPIKVTLPDGKQVDAESWKTTPYQIACGISQGLADNTVVAKVNKVVWDLDRPLETDCTL 138

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQP-FSSDE 118
           E++  ED  + AV  HS AHIM EA++ ++    +  GP IE+GFYYD   E+   SS++
Sbjct: 139 ELLKFEDEEAQAVYWHSSAHIMGEAMERVYGGC-LCYGPPIENGFYYDMYLEEGGVSSND 197

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
            + +E   ++II     F +  +  E   E+F+     +K  IL         T+YR G 
Sbjct: 198 FSSLETLCKKIIKEKQTFERLEVKKETLLEMFKY--NKFKCRILNEKVNTPTTTVYRCGP 255

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLCRGPHVR TG++K   K+ K +  YW G ++   L RIYG ++   + L ++  F 
Sbjct: 256 LIDLCRGPHVRHTGKIKTL-KIHKNSSTYWEGKADMETLQRIYGISFPDPKLLKEWEKFQ 314

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
           EE++ RDHRK+ R+ +L+   E   G  F+  KG  I+ TL+ ++R + +   ++E+ TP
Sbjct: 315 EEAKNRDHRKIGRDQELYFFHELSPGSCFFLPKGAYIYNTLMEFIRSEYRKRGFQEVVTP 374

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  LW  SGHW  Y  NMF+ +       +   FALKPMNCPGH  +F+H  +S+RE
Sbjct: 375 NIFNSRLWMTSGHWQHYSENMFSFEV------EKEQFALKPMNCPGHCLMFDHRPRSWRE 428

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+RLA+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E     + + ++Y  
Sbjct: 429 LPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSV 488

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF   +  LSTRPEK +G   +W+ AE  ++  L+      +      +  G+GAFYGP
Sbjct: 489 FGFSFKLN-LSTRPEKFLGDIEIWNQAEKQLENSLNEFGEKWE------LNPGDGAFYGP 541

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIG 536
           K +  +KDAIGR  QC TIQ+ F LP RFN  YV+    +K  PV++HRA+ GS+ER I 
Sbjct: 542 KIDIQIKDAIGRYHQCATIQLYFQLPIRFNLTYVSHDGDDKKRPVIVHRAILGSVERMIA 601

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKI 595
           I+ EN+ G  P WLSP Q +V  +  +  EYAQ++           +TD     T+N KI
Sbjct: 602 ILTENYGGKWPFWLSPRQVMVVPVGPTCDEYAQKVRQQFHDAKFMADTDLDPGCTLNKKI 661

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           R   + +   I++ G+KE +  ++ IR   +    + ++ + +  L +
Sbjct: 662 RNAQLAQYNFILVVGEKEKASGTVNIRTRDNKVHGERTVEETVRRLQQ 709


>gi|254304252|ref|ZP_04971610.1| threonine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
 gi|148324444|gb|EDK89694.1| threonine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
          Length = 637

 Score =  623 bits (1606), Expect = e-176,   Method: Composition-based stats.
 Identities = 286/640 (44%), Positives = 406/640 (63%), Gaps = 17/640 (2%)

Query: 11  DGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRS 69
           +G  K +  +    ++A+ IS SLAKK+V   ++GK  D+S  +  +  +E I  + P  
Sbjct: 6   NGENKEYNSNVNMFEIAKGISNSLAKKSVGAKVDGKNVDMSYVLDHDAEVEFIDIDSPEG 65

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
             ++RHS AH+MA+AV  ++P+ +V IGP+IE+GFYYDFD  + F+ ++L +IE +M++I
Sbjct: 66  EDIVRHSTAHLMAQAVLRLYPDTKVTIGPVIENGFYYDFDPVEQFTEEDLEKIEAEMKKI 125

Query: 130 IARDSPFLKQYLSHEKARELFES-KKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           +  +    K  L  ++A + F    K  YKVEI+E IP  E V+ Y+QG++ DLCRG HV
Sbjct: 126 VKENIKLEKYVLPRDEAIDYFRDVDKNKYKVEIVEGIPQGEQVSFYKQGDFTDLCRGTHV 185

Query: 189 RSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRK 248
            STG +K F KL  VAGAYWRG+S   ML RIYG +++ +  L ++L  +EE+EKRDHRK
Sbjct: 186 PSTGYLKAF-KLRTVAGAYWRGNSKNKMLQRIYGYSFSNEDRLKKHLKLMEEAEKRDHRK 244

Query: 249 LAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQ 307
           L +E++LF ++E G G  F+  KG  I   LI   R++ +   Y ++ TP +L++ LW+ 
Sbjct: 245 LGKELELFFLSEYGPGFPFFLPKGMVIRNVLIDLWRKEHEKAKYLQLETPIMLNKELWEV 304

Query: 308 SGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGS 367
           SGHW +YR NM+  +       D   FA+KPMNCPG V  F H L SY++LP RLAE G 
Sbjct: 305 SGHWFNYRENMYTSEI------DELEFAIKPMNCPGGVLSFKHQLHSYKDLPARLAELGR 358

Query: 368 VYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKL 427
           V+R+E SG+LHGLMRVR FTQDD+H+F T +Q+ +E + + NLI   Y      +  ++L
Sbjct: 359 VHRHEFSGALHGLMRVRSFTQDDSHIFMTPDQVQDEIIGVVNLIDKFYSKLFGFEYEIEL 418

Query: 428 STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAI 487
           ST+PEK +GS  +WD AE  + G LD +           +  G+GAFYGPK ++ +KDAI
Sbjct: 419 STKPEKAIGSQEIWDMAEAALAGALDKLGR------KYKINPGDGAFYGPKLDFKIKDAI 472

Query: 488 GRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           GR WQCGTIQ+DFNLP RF+  Y+    EK  PVM+HR ++GSIERFIGI+IE++ G  P
Sbjct: 473 GRMWQCGTIQLDFNLPERFDVTYIGEDGEKHRPVMLHRVIYGSIERFIGILIEHYAGAFP 532

Query: 548 LWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH-SIKKIPII 606
           +WL+P+Q  V T+    + YA+EI N L+   +  E D RNETI YKIRE     KIP+ 
Sbjct: 533 MWLAPVQVKVLTLNDECIPYAKEIMNKLEELGIRAELDDRNETIGYKIREANGRYKIPMQ 592

Query: 607 IICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           +I G  E   + + IRRFGS      SL +    +  E+ 
Sbjct: 593 LIIGKNEVENKEVNIRRFGSKDQFSKSLDEFYNYVVDEAT 632


>gi|195578689|ref|XP_002079196.1| GD23818 [Drosophila simulans]
 gi|194191205|gb|EDX04781.1| GD23818 [Drosophila simulans]
          Length = 747

 Score =  623 bits (1606), Expect = e-176,   Method: Composition-based stats.
 Identities = 240/646 (37%), Positives = 363/646 (56%), Gaps = 22/646 (3%)

Query: 3   SDIKLTFPDGS-IKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIE 60
             IK+T PDG  +       T  +VA  IS+ LA   V   +NG+V DL   +    +++
Sbjct: 107 EPIKVTLPDGKQVDATSWETTPYEVARGISQGLADNTVISKVNGEVWDLDRVLEGNCTLQ 166

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDEL 119
           ++  +DP + AV  HS AHIM EA++ I+    +  GP IE+GFYYD   E +  S+++ 
Sbjct: 167 LLKFDDPEAQAVFWHSSAHIMGEAMERIYGGH-LCYGPPIENGFYYDMHLEGEGISTNDY 225

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             +E  +++I+     F +  +      E+F+     +KV IL      +  T+Y+ G  
Sbjct: 226 GAMEGLVKQIVKEKQNFERLEMKKSDLLEMFKY--NEFKVRILNEKVTTDRTTVYKCGSL 283

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHVR TG+VK   K+ K +  YW G ++   L R+YG ++   ++L ++    E
Sbjct: 284 IDLCRGPHVRHTGKVK-ALKITKNSSTYWEGKADAETLQRVYGISFPDPKQLKEWEKLQE 342

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+ KRDHRK+ RE +LF   E   G  F+  +G  I+ TL+ +++ + +   ++E+ +P 
Sbjct: 343 EAAKRDHRKIGREQELFFFHELSPGSCFFQPRGAHIYNTLMGFIKAEYRKRGFQEVISPN 402

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           + +  LW  SGHW+ Y  NMF+ +       +   FALKPMNCPGH  +F++  +S+REL
Sbjct: 403 IYNAKLWMTSGHWEHYAENMFSFE------AEKEKFALKPMNCPGHCLIFDNRNRSWREL 456

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+A+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E       +  +Y  F
Sbjct: 457 PLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAPEQIKSEMKGCLEFLKYVYTIF 516

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF   +V LSTRP+  +G    W+DAE  +   L+      ++        G+GAFYGPK
Sbjct: 517 GFSFQLV-LSTRPDNYLGELEQWNDAEKALAESLNEFGMPWKE------NPGDGAFYGPK 569

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +  + DA+ R  QC TIQ+DF LP RFN  Y+    EK  PV+IHRA+ GS+ER I I+
Sbjct: 570 IDITIMDALKRAHQCATIQLDFQLPIRFNLSYIADDGEKKRPVIIHRAILGSVERMIAIL 629

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FRNETINYKIRE 597
            ENF G  P WLSP Q +V  +  +  +YAQ + + L       E D    +T+N KIR 
Sbjct: 630 TENFAGKWPFWLSPRQVMVVPVGPAYDQYAQAVRDQLHDAGFMSEADCDAGDTMNKKIRN 689

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             + +   I++ GDKE S  ++ +R   +    +VS+ + I  L K
Sbjct: 690 AQLAQFNFILVVGDKERSSNTVNVRTRDNKVHGEVSVAELITKLQK 735


>gi|195351005|ref|XP_002042027.1| GM26732 [Drosophila sechellia]
 gi|194123851|gb|EDW45894.1| GM26732 [Drosophila sechellia]
          Length = 747

 Score =  623 bits (1606), Expect = e-176,   Method: Composition-based stats.
 Identities = 240/646 (37%), Positives = 363/646 (56%), Gaps = 22/646 (3%)

Query: 3   SDIKLTFPDGS-IKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIE 60
             IK+T PDG  +       T  +VA  IS+ LA   V   +NG+V DL   +    +++
Sbjct: 107 EPIKVTLPDGKQVDATSWETTPYEVARGISQGLADNTVISKVNGEVWDLDRVLEGNCTLQ 166

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDEL 119
           ++  +DP + AV  HS AHIM EA++ I+    +  GP IE+GFYYD   E +  S+++ 
Sbjct: 167 LLKFDDPEAQAVFWHSSAHIMGEAMERIYGGH-LCYGPPIENGFYYDMHLEGEGISTNDY 225

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             +E  +++I+     F +  +      E+F+     +KV IL      +  T+Y+ G  
Sbjct: 226 GAMEGLVKQIVKEKQNFERLEMKKSDLLEMFKY--NEFKVRILNEKVTTDRTTVYKCGSL 283

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHVR TG+VK   K+ K +  YW G ++   L R+YG ++   ++L ++    E
Sbjct: 284 IDLCRGPHVRHTGKVK-ALKITKNSSTYWEGKADAETLQRVYGISFPDPKQLKEWEKLQE 342

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+ KRDHRK+ RE +LF   E   G  F+  +G  I+ TL+ +++ + +   ++E+ +P 
Sbjct: 343 EAAKRDHRKIGREQELFFFHELSPGSCFFQPRGAHIYNTLMGFIKAEYRKRGFQEVISPN 402

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           + +  LW  SGHW+ Y  NMF+ +       +   FALKPMNCPGH  +F++  +S+REL
Sbjct: 403 IYNAKLWMTSGHWEHYAENMFSFE------AEKEKFALKPMNCPGHCLIFDNRNRSWREL 456

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+A+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E       +  +Y  F
Sbjct: 457 PLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAPEQIKSEMKGCLEFLKYVYTIF 516

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF   +V LSTRP+  +G    W+DAE  +   L+      ++        G+GAFYGPK
Sbjct: 517 GFSFQLV-LSTRPDNYLGELEQWNDAEKALAESLNEFGMPWKE------NPGDGAFYGPK 569

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +  + DA+ R  QC TIQ+DF LP RFN  Y+    EK  PV+IHRA+ GS+ER I I+
Sbjct: 570 IDITIMDALKRAHQCATIQLDFQLPIRFNLSYIADDGEKKRPVIIHRAILGSVERMIAIL 629

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FRNETINYKIRE 597
            ENF G  P WLSP Q +V  +  +  +YAQ + + L       E D    +T+N KIR 
Sbjct: 630 TENFAGKWPFWLSPRQVMVVPVGPAYDQYAQAVRDQLHDAGFMSEADCDAGDTMNKKIRN 689

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             + +   I++ GDKE S  ++ +R   +    +VS+ + I  L K
Sbjct: 690 AQLAQFNFILVVGDKERSSNTVNVRTRDNKVHGEVSVAELITKLQK 735


>gi|254527233|ref|ZP_05139285.1| threonyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
 gi|221538657|gb|EEE41110.1| threonyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
          Length = 638

 Score =  623 bits (1606), Expect = e-176,   Method: Composition-based stats.
 Identities = 290/637 (45%), Positives = 422/637 (66%), Gaps = 15/637 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS K F    T  ++A+SI   LAK  +A  +N  + D + P+  +  + IIT +
Sbjct: 4   ITLPDGSKKVFEKSVTILEIAQSIGAGLAKATIAGKVNDVLLDATIPINRDSKVVIITSK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   + +IRHS AH++  AV+ I+ ++++AIGP+IEDGFYYD   E  F+ ++L +IE +
Sbjct: 64  DKEGIEIIRHSFAHLIGHAVKQIYSDIKMAIGPVIEDGFYYDIFSEYRFTPEDLIKIENR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           + ++I  +       +S ++A + F+ + E +K+ I+E IP +  + LY+  E+ D+CRG
Sbjct: 124 INKLIKTNYDVEILQVSKKEAIKTFKERDETFKLRIIEDIPEEGLINLYKHEEYIDMCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +T  ++ F KL+K++G+YWRG+S    L RIYGTAW  ++EL  YL  +EE+EKRD
Sbjct: 184 PHVPNTRHLRHF-KLLKLSGSYWRGNSENESLQRIYGTAWAKEKELNNYLKRIEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHL 304
           HRKL ++  LFHI E+  G+IFWH  GW I+Q L  Y+R  +K +DY EI TPQ +D+ L
Sbjct: 243 HRKLGKKHSLFHIQEESPGMIFWHPNGWTIYQVLEKYIREILKKNDYLEIKTPQAVDKSL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHW+ +R +MF       T  + RT+A+KPMNCP H+ VFN GLKSY++LP+RLAE
Sbjct: 303 WEKSGHWEKFRDDMFT------TASENRTYAIKPMNCPCHIQVFNQGLKSYKDLPIRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNEPSG+LHGLMRVR FTQDDAH+FCT+EQ+  E     +L+  +YK FGF++I+
Sbjct: 357 FGSCHRNEPSGALHGLMRVRNFTQDDAHIFCTEEQIQEEVSTFIDLVFEVYKTFGFDEII 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +KLSTRPEK+VGS+ +WD +E  +   LD         +   +  GEGAFYGPK E+ LK
Sbjct: 417 IKLSTRPEKKVGSEEIWDKSEEALTKALD------NKNLKWELQPGEGAFYGPKIEFSLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D + R WQCGTIQVDF++P R +A YV+  +EK +PVM+HRA+ GS ERFIGI+IE ++ 
Sbjct: 471 DCLNRVWQCGTIQVDFSMPVRLDATYVDIDNEKRNPVMLHRAILGSFERFIGILIEQYEA 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P+WL+P Q  + +IT   +E   +   LL ++      D RNE I YKIRE ++ ++P
Sbjct: 531 KFPIWLAPYQITLLSITDRNIEKCLKFNELLINNGYRSTVDIRNEKIGYKIREATLGRVP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           +I + GDKE    S+ +R          +L +   ++
Sbjct: 591 LIAVIGDKEEEIDSVSLRALDGRDLGIFNLTNLCKLM 627


>gi|301768134|ref|XP_002919483.1| PREDICTED: threonyl-tRNA synthetase, cytoplasmic-like [Ailuropoda
           melanoleuca]
          Length = 723

 Score =  622 bits (1605), Expect = e-176,   Method: Composition-based stats.
 Identities = 241/648 (37%), Positives = 364/648 (56%), Gaps = 23/648 (3%)

Query: 2   PSDIKLTFPDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
              IK+T PDG   N      T   +A  IS+ LA   V   +N  V DL  P+  + ++
Sbjct: 80  SKPIKVTLPDGKQVNAESWKTTPYQIAYGISQGLADNTVIAKVNQVVWDLDRPLEEDCTL 139

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQP-FSSDE 118
           E++  ED  + AV  HS AHIM EA++ ++    +  GP IE+GFYYD   E+   SS++
Sbjct: 140 ELLKFEDEEAQAVYWHSSAHIMGEAMERVYGGC-LCYGPPIENGFYYDMYLEEGGVSSND 198

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
            + +E   ++II     F +  +  E   E+F+     +K  IL         T+YR G 
Sbjct: 199 FSSLEALCKKIIKEKQAFERLEVKKETLLEMFKY--NKFKCRILNEKVNTPTTTVYRCGP 256

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLCRGPHVR TG++K   K+ K +  YW G ++   L RIYG ++   + L ++  F 
Sbjct: 257 LIDLCRGPHVRHTGKIKTL-KIHKNSSTYWEGKADMETLQRIYGISFPDPKMLKEWEKFQ 315

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
           EE++ RDHRK+ R+ +L+   E   G  F+  KG  I+ TLI ++R + +   ++E+ +P
Sbjct: 316 EEAKNRDHRKIGRDQELYFFHELSPGSCFFLPKGAYIYNTLIEFIRSEYRKRGFQEVVSP 375

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  LW  SGHW  Y  NMF+ +       +   FALKPMNCPGH  +F+H  +S+RE
Sbjct: 376 NIYNSRLWMTSGHWQHYSENMFSFEV------EKELFALKPMNCPGHCLMFDHRPRSWRE 429

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+A+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E     + + ++Y  
Sbjct: 430 LPLRIADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAIEQIEDEIKGCLDFLRTVYNV 489

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF   +  LSTRPEK +G   +W+ AE  ++  L+      +      +  G+GAFYGP
Sbjct: 490 FGFSFKLN-LSTRPEKFLGDIEVWNQAEKQLENSLNEFGEKWE------LNPGDGAFYGP 542

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIG 536
           K +  +KDAIGR  QC TIQ+DF LP RFN  +V+    +K  PV++HRA+ GS+ER I 
Sbjct: 543 KIDIQIKDAIGRYHQCATIQLDFQLPIRFNLTFVSHDGDDKKRPVIVHRAILGSVERMIA 602

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKI 595
           I+ ENF G  P WLSP Q +V  +  +  EYAQ++         +++ D     T+N KI
Sbjct: 603 ILTENFGGKWPFWLSPRQVMVVPVGPTCDEYAQKVRQQFHDAKFTVDIDLDPGCTLNKKI 662

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           R   + +   I++ G+KE +  ++ IR   +    + ++ + I  L +
Sbjct: 663 RNAQLAQYNFILVIGEKEKASGTVNIRTRDNKVHGERTISETIERLQQ 710


>gi|296194829|ref|XP_002745122.1| PREDICTED: threonyl-tRNA synthetase, cytoplasmic [Callithrix
           jacchus]
          Length = 723

 Score =  622 bits (1605), Expect = e-176,   Method: Composition-based stats.
 Identities = 238/648 (36%), Positives = 358/648 (55%), Gaps = 23/648 (3%)

Query: 2   PSDIKLTFPDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
              IK+T PDG   +      T   +A  IS+ LA   V   +N  V DL  P+  + ++
Sbjct: 80  SKPIKVTLPDGKQVDAESWKTTPYQIACGISQGLADNTVIAKVNNVVWDLDRPLEEDCTL 139

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQP-FSSDE 118
            ++  ED  + AV  HS AHIM EA++ ++    +  GP IE+GFYYD   E+   SS++
Sbjct: 140 ALLKFEDEEAQAVYWHSSAHIMGEAMERVYGGC-LCYGPPIENGFYYDMYLEEGGVSSND 198

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
            + +E   ++II     F +  +  E    +F+     +K  IL         T+YR G 
Sbjct: 199 FSSLEALCKKIIKEKQAFERLEVKKETLLAMFKY--NKFKCRILNEKVNTPTTTVYRCGP 256

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLCRGPHVR TG++K   K+ K +  YW G ++   L RIYG ++   + L ++  F 
Sbjct: 257 LIDLCRGPHVRHTGKIK-ALKIHKNSSTYWEGKADMETLQRIYGISFPDPKMLKEWEKFQ 315

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
           EE++ RDHRK+ R+ +L+   E   G  F+  KG  I+  LI ++R + +   ++E+ TP
Sbjct: 316 EEAKNRDHRKIGRDQELYFFHELSPGSCFFLPKGAYIYNALIDFIRSEYRKRGFQEVVTP 375

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  LW  SGHW  Y  NMF+ +       +   FALKPMNCPGH  +F+H  +S+RE
Sbjct: 376 NIYNSRLWMTSGHWQHYSENMFSFEV------EKEQFALKPMNCPGHCLMFDHRPRSWRE 429

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+RLA+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E     + +  +Y  
Sbjct: 430 LPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRMVYSV 489

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF   +  LSTRPEK +G   +W+ AE  ++  L+      +      +  G+GAFYGP
Sbjct: 490 FGFSFKLN-LSTRPEKFLGDIEVWNQAEKQLENSLNEFGEKWE------LNSGDGAFYGP 542

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIG 536
           K +  +KDAIGR  QC TIQ+DF LP RFN  +V+    +K  PV++HRA+ GS+ER I 
Sbjct: 543 KIDIQIKDAIGRYHQCATIQLDFQLPIRFNLTFVSHDGDDKKRPVIVHRAILGSVERMIA 602

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKI 595
           I+ EN+ G  P WLSP Q +V  +  S  EYAQ++     +     + D     T+N KI
Sbjct: 603 ILTENYGGKWPFWLSPRQVMVVPVGPSCDEYAQKVRQQFHAAKFMADVDLDPGCTLNKKI 662

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           R   + +   I++ G+KE    ++ IR   +    + ++ + +  L +
Sbjct: 663 RNAQLAQYNFILVVGEKEKISGTVNIRTRDNKVHGERTVSETVERLQQ 710


>gi|25013040|gb|AAN71609.1| RH56418p [Drosophila melanogaster]
 gi|220950596|gb|ACL87841.1| Aats-thr-PB [synthetic construct]
          Length = 711

 Score =  622 bits (1605), Expect = e-176,   Method: Composition-based stats.
 Identities = 240/646 (37%), Positives = 362/646 (56%), Gaps = 22/646 (3%)

Query: 3   SDIKLTFPDGS-IKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIE 60
             IK+T PDG  +       T  +VA  IS+ LA   V   +NG+V DL   +    +++
Sbjct: 71  EPIKVTLPDGKQVDATSWETTPYEVARGISQGLADNTVISKVNGEVWDLDRVLEGNCTLQ 130

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDEL 119
           ++  +DP + AV  HS AHIM EA++ I+    +  GP IE+GFYYD   E +  S+++ 
Sbjct: 131 LLKFDDPEAQAVFWHSSAHIMGEAMERIYGGH-LCYGPPIENGFYYDMHLEGEGISTNDY 189

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             +E  +++I+     F +  +      E+F+     +KV IL      +  T+Y+ G  
Sbjct: 190 GAMEGLVKQIVKEKQNFERLEMKKSDLLEMFKY--NEFKVRILNEKVTTDRTTVYKCGSL 247

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHVR TG+VK   K+ K +  YW G ++   L R+YG ++   ++L ++    E
Sbjct: 248 IDLCRGPHVRHTGKVK-ALKITKNSSTYWEGKADAETLQRVYGISFPDPKQLKEWEKLQE 306

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+ KRDHRK+ RE +LF   E   G  F+  +G  I+ TL+ +++ + +   ++E+ +P 
Sbjct: 307 EAAKRDHRKIGREQELFFFHELSPGSCFFQPRGAHIYNTLMGFIKAEYRKRGFQEVISPN 366

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           + +  LW  SGHW  Y  NMF+ +       +   FALKPMNCPGH  +F++  +S+REL
Sbjct: 367 IYNAKLWMTSGHWQHYAENMFSFE------AEKEKFALKPMNCPGHCLIFDNRNRSWREL 420

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+A+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E       +  +Y  F
Sbjct: 421 PLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAPEQIKSEMKGCLEFLKYVYTIF 480

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF   +V LSTRP+  +G    W+DAE  +   L+      ++        G+GAFYGPK
Sbjct: 481 GFSFQLV-LSTRPDNYLGELEQWNDAEKALAESLNEFGMPWKE------NPGDGAFYGPK 533

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +  + DA+ R  QC TIQ+DF LP RFN  Y+    EK  PV+IHRA+ GS+ER I I+
Sbjct: 534 IDITIMDALKRAHQCATIQLDFQLPIRFNLSYIADDGEKKRPVIIHRAILGSVERMIAIL 593

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FRNETINYKIRE 597
            ENF G  P WLSP Q +V  +  +  +YAQ + + L       E D    +T+N KIR 
Sbjct: 594 TENFAGKWPFWLSPRQVMVVPVGPAYDQYAQSVRDQLHDAGFMSEADCDAGDTMNKKIRN 653

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             + +   I++ GDKE S  ++ +R   +    +VS+ + I  L K
Sbjct: 654 AQLAQFNFILVVGDKERSSNTVNVRTRDNKVHGEVSVAELITKLQK 699


>gi|312879874|ref|ZP_07739674.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Aminomonas
           paucivorans DSM 12260]
 gi|310783165|gb|EFQ23563.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Aminomonas
           paucivorans DSM 12260]
          Length = 631

 Score =  622 bits (1605), Expect = e-176,   Method: Composition-based stats.
 Identities = 262/641 (40%), Positives = 392/641 (61%), Gaps = 18/641 (2%)

Query: 10  PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPR 68
           P G +       T  ++    S  L K  VA  +NG + DLS P+ EG ++E +  +   
Sbjct: 7   PSGKVLETEEPRTSGELIT--SWKLGKGVVAARVNGVLVDLSTPLTEGGTVEPVAGDCEE 64

Query: 69  SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQE 128
            L ++RHS AH+MA+A++ ++PE +  IGP ++DGFYYD    +  + ++L  I+ +M  
Sbjct: 65  GLEILRHSAAHLMAQAIRRLFPEARFGIGPAVKDGFYYDVLPPRALTEEDLPVIQAEMDR 124

Query: 129 IIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           I+  D    ++ L  E+   LF  + E +K+E+L  IP  E ++ Y QG++ DLCRGPHV
Sbjct: 125 IVQEDVRVERRVLPREEVIRLFRQRGEIFKLELLGEIP-DEEISTYWQGDFVDLCRGPHV 183

Query: 189 RSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRK 248
            ST  + +  KL+ +AGAYWRG+    ML+RIYGTA+  +  L Q+L  LEE+++RDHRK
Sbjct: 184 PSTS-LLRHVKLLSLAGAYWRGNEKNVMLTRIYGTAFGDKASLEQHLKRLEEAKQRDHRK 242

Query: 249 LAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQ 307
           L RE+DLF +  +  G  F+H KG  +   L+++  R   +  Y EI TP +LD+ LW++
Sbjct: 243 LGRELDLFSLQPEAPGFPFFHPKGMVVLGELVNFWKREHQRRGYCEIRTPLILDRALWER 302

Query: 308 SGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGS 367
           SGHWD YR NM+       T  D R FA+KPMNCPG + VF    +SYR+LP+R+ E G+
Sbjct: 303 SGHWDHYRDNMYF------TTIDERPFAIKPMNCPGGILVFKSSTRSYRDLPLRMGELGT 356

Query: 368 VYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKL 427
           V+R+E SG LHGLMRVR FTQDDAH++CT +Q+  E   + +L+  +YKD       V+L
Sbjct: 357 VHRHERSGVLHGLMRVRCFTQDDAHLYCTPDQVAQEIAGVIDLMRYVYKDVFGFPYRVEL 416

Query: 428 STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAI 487
           STRPE  +G  +LW+ AE  ++  L+             V  G+GAFYGPK ++ L+D I
Sbjct: 417 STRPENYMGELSLWNLAEQKLQEALEATGTP------YKVNPGDGAFYGPKIDFHLEDCI 470

Query: 488 GRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           GR WQCGTIQ+DF +P +F+  Y+     +  PVM+HR VFGS+ERF+GI+IE++ G  P
Sbjct: 471 GRTWQCGTIQLDFQMPEKFDVAYIGPDGAEHRPVMLHRTVFGSLERFLGILIEHYAGAFP 530

Query: 548 LWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIII 607
            WL+P+QA +  +++  + YA+E+  +L+S  +  ETD R E +  KIR+  + K+P ++
Sbjct: 531 YWLAPVQAKILPVSTDLLPYAREVEGILQSWGVRTETDTREEKLGRKIRDAQLSKVPYML 590

Query: 608 ICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
           + G +EA  R++ +R         +SL     +L  E  P 
Sbjct: 591 VLGGREAESRTVAVRERVRGDLGSLSLEALKEMLEGEYAPA 631


>gi|123981026|gb|ABM82342.1| threonyl-tRNA synthetase [synthetic construct]
 gi|123995829|gb|ABM85516.1| threonyl-tRNA synthetase [synthetic construct]
          Length = 711

 Score =  622 bits (1604), Expect = e-176,   Method: Composition-based stats.
 Identities = 241/648 (37%), Positives = 359/648 (55%), Gaps = 23/648 (3%)

Query: 2   PSDIKLTFPDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
              IK+T PDG   +      T   +A  IS+ LA   V   +N  V DL  P+  + ++
Sbjct: 68  SKPIKVTLPDGKQVDAESWKTTPYQIACGISQGLADNTVIAKVNNVVWDLDRPLEEDCTL 127

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQP-FSSDE 118
           E++  ED  + AV  HS AHIM EA++ ++    +  GP IE+GFYYD   E+   SS++
Sbjct: 128 ELLKFEDEEAQAVYWHSSAHIMGEAMERVYGGC-LCYGPPIENGFYYDMYLEEGGVSSND 186

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
            + +E   ++II     F +  +  E    +F+     +K  IL         T+YR G 
Sbjct: 187 FSSLEALCKKIIKEKQAFERLEVKKETLLAMFKY--NKFKCRILNEKVNTPTTTVYRCGP 244

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLCRGPHVR TG++K   K+ K +  YW G ++   L RIYG ++   + L ++  F 
Sbjct: 245 LIDLCRGPHVRHTGKIK-ALKIHKNSSTYWEGKADMETLQRIYGISFPDPKMLKEWEKFQ 303

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
           EE++ RDHRK+ R+ +L+   E   G  F+  KG  I+  LI ++R + +   ++E+ TP
Sbjct: 304 EEAKNRDHRKIGRDQELYFFHELSPGSCFFLPKGAYIYNALIEFIRSEYRKRGFQEVVTP 363

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  LW  SGHW  Y  NMF+ +       +   FALKPMNCPGH  +F+H  +S+RE
Sbjct: 364 NIFNSRLWMTSGHWQHYSENMFSFEV------EKELFALKPMNCPGHCLMFDHRPRSWRE 417

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+RLA+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E     + + ++Y  
Sbjct: 418 LPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSV 477

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF   +  LSTRPEK +G   +WD AE  ++  L+      +      +  G+GAFYGP
Sbjct: 478 FGFSFKLN-LSTRPEKFLGDIEVWDQAEKQLENSLNEFGEKWE------LNSGDGAFYGP 530

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIG 536
           K +  +KDAIGR  QC TIQ+DF LP RFN  YV+    +K  PV++HRA+ GS+ER I 
Sbjct: 531 KIDIQIKDAIGRYHQCATIQLDFQLPIRFNLTYVSHDGDDKKRPVIVHRAILGSVERMIA 590

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKI 595
           I+ EN+ G  P WLSP Q +V  +  +  EYAQ++           + D     T+N KI
Sbjct: 591 ILTENYGGKWPFWLSPRQVMVVPVGPTCDEYAQKVRQQFHDAKFMADIDLDPGCTLNKKI 650

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           R   + +   I++ G+KE    ++ IR   +    + ++ + I  L +
Sbjct: 651 RNAQLAQYNFILVVGEKEKISGTVNIRTRDNKVHGERTISETIERLQQ 698


>gi|194223978|ref|XP_001498225.2| PREDICTED: threonyl-tRNA synthetase [Equus caballus]
          Length = 722

 Score =  622 bits (1604), Expect = e-176,   Method: Composition-based stats.
 Identities = 240/648 (37%), Positives = 362/648 (55%), Gaps = 23/648 (3%)

Query: 2   PSDIKLTFPDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
              IK+T PDG   +      T   +A  IS+ LA   V   +N  V DL  P+  + ++
Sbjct: 79  SKPIKVTLPDGKQVDAESWKTTAYQIACGISQGLADNTVIAKVNKAVWDLDRPLEEDCTL 138

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQP-FSSDE 118
           E++  ED  + AV  HS AHIM EA++ ++    +  GP IE+GFYYD   ++   SS++
Sbjct: 139 ELLKFEDEEAQAVYWHSSAHIMGEAMERVYGGC-LCYGPPIENGFYYDMYLDEGGVSSND 197

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
            + +E   ++II     F +  +  E   E+F+     +K  IL         T+YR G 
Sbjct: 198 FSSLEGLCKKIIKEKQAFERLEVKKETLLEMFKY--NKFKCRILNEKVNTPTTTVYRCGP 255

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLCRGPHVR TG++K   K+ K +  YW G ++   L RIYG ++   + L ++  F 
Sbjct: 256 LIDLCRGPHVRHTGKIKTL-KIHKNSSTYWEGKADMETLQRIYGISFPDPKMLKEWEKFQ 314

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
           EE++ RDHRK+ R+ +L+   E   G  F+  KG  I+ TLI ++R + +   ++E+ TP
Sbjct: 315 EEAKNRDHRKIGRDQELYFFHELSPGSCFFLPKGAYIYNTLIEFIRSEYRKRGFQEVVTP 374

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  LW  SGHW  Y  NMF+ +       +   FALKPMNCPGH  +F+H  +S+RE
Sbjct: 375 NIYNSRLWMTSGHWQHYSENMFSFEV------EKELFALKPMNCPGHCLMFDHRPRSWRE 428

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+A+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E     + + ++Y  
Sbjct: 429 LPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAIEQIEDEIKGCLDFLRTVYSV 488

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF   +  LSTRPEK +G   +W+ AE  ++  L+             +  G+GAFYGP
Sbjct: 489 FGFSFKLN-LSTRPEKFLGDIEVWNQAEKQLENSLNEFGEKW------VLNPGDGAFYGP 541

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIG 536
           K +  +KDAIGR  QC TIQ+DF LP RFN  +V+    +K  PV++HRA+ GS+ER I 
Sbjct: 542 KIDIQIKDAIGRYHQCATIQLDFQLPIRFNLTFVSHDGDDKKRPVIVHRAILGSVERMIA 601

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKI 595
           I+ EN+ G  P WLSP Q +V  +  +  EYAQ++          ++ D     T+N KI
Sbjct: 602 ILTENYGGKWPFWLSPRQVMVVPVGPTCDEYAQKVRQQFHDAKFMVDVDLDPGCTLNKKI 661

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           R   + +   I++ G+KE +  ++ IR   +    + +L + I  L +
Sbjct: 662 RNAQLAQYNFILVVGEKEKTSGTVNIRTRDNKVHGERTLSETIERLQQ 709


>gi|38202255|ref|NP_689508.3| threonyl-tRNA synthetase, cytoplasmic [Homo sapiens]
 gi|60267755|sp|P26639|SYTC_HUMAN RecName: Full=Threonyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|33875537|gb|AAH00517.2| Threonyl-tRNA synthetase [Homo sapiens]
 gi|119631209|gb|EAX10804.1| threonyl-tRNA synthetase, isoform CRA_b [Homo sapiens]
 gi|158258124|dbj|BAF85035.1| unnamed protein product [Homo sapiens]
 gi|168277378|dbj|BAG10667.1| threonyl-tRNA synthetase [synthetic construct]
 gi|190690713|gb|ACE87131.1| threonyl-tRNA synthetase protein [synthetic construct]
          Length = 723

 Score =  622 bits (1604), Expect = e-176,   Method: Composition-based stats.
 Identities = 241/648 (37%), Positives = 359/648 (55%), Gaps = 23/648 (3%)

Query: 2   PSDIKLTFPDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
              IK+T PDG   +      T   +A  IS+ LA   V   +N  V DL  P+  + ++
Sbjct: 80  SKPIKVTLPDGKQVDAESWKTTPYQIACGISQGLADNTVIAKVNNVVWDLDRPLEEDCTL 139

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQP-FSSDE 118
           E++  ED  + AV  HS AHIM EA++ ++    +  GP IE+GFYYD   E+   SS++
Sbjct: 140 ELLKFEDEEAQAVYWHSSAHIMGEAMERVYGGC-LCYGPPIENGFYYDMYLEEGGVSSND 198

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
            + +E   ++II     F +  +  E    +F+     +K  IL         T+YR G 
Sbjct: 199 FSSLEALCKKIIKEKQAFERLEVKKETLLAMFKY--NKFKCRILNEKVNTPTTTVYRCGP 256

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLCRGPHVR TG++K   K+ K +  YW G ++   L RIYG ++   + L ++  F 
Sbjct: 257 LIDLCRGPHVRHTGKIK-ALKIHKNSSTYWEGKADMETLQRIYGISFPDPKMLKEWEKFQ 315

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
           EE++ RDHRK+ R+ +L+   E   G  F+  KG  I+  LI ++R + +   ++E+ TP
Sbjct: 316 EEAKNRDHRKIGRDQELYFFHELSPGSCFFLPKGAYIYNALIEFIRSEYRKRGFQEVVTP 375

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  LW  SGHW  Y  NMF+ +       +   FALKPMNCPGH  +F+H  +S+RE
Sbjct: 376 NIFNSRLWMTSGHWQHYSENMFSFEV------EKELFALKPMNCPGHCLMFDHRPRSWRE 429

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+RLA+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E     + + ++Y  
Sbjct: 430 LPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSV 489

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF   +  LSTRPEK +G   +WD AE  ++  L+      +      +  G+GAFYGP
Sbjct: 490 FGFSFKLN-LSTRPEKFLGDIEVWDQAEKQLENSLNEFGEKWE------LNSGDGAFYGP 542

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIG 536
           K +  +KDAIGR  QC TIQ+DF LP RFN  YV+    +K  PV++HRA+ GS+ER I 
Sbjct: 543 KIDIQIKDAIGRYHQCATIQLDFQLPIRFNLTYVSHDGDDKKRPVIVHRAILGSVERMIA 602

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKI 595
           I+ EN+ G  P WLSP Q +V  +  +  EYAQ++           + D     T+N KI
Sbjct: 603 ILTENYGGKWPFWLSPRQVMVVPVGPTCDEYAQKVRQQFHDAKFMADIDLDPGCTLNKKI 662

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           R   + +   I++ G+KE    ++ IR   +    + ++ + I  L +
Sbjct: 663 RNAQLAQYNFILVVGEKEKISGTVNIRTRDNKVHGERTISETIERLQQ 710


>gi|52632425|gb|AAH10578.2| Threonyl-tRNA synthetase [Homo sapiens]
          Length = 723

 Score =  622 bits (1604), Expect = e-176,   Method: Composition-based stats.
 Identities = 241/648 (37%), Positives = 360/648 (55%), Gaps = 23/648 (3%)

Query: 2   PSDIKLTFPDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
              IK+T PDG   +      T   +A  IS+ LA   V   +N  V DL  P+  + ++
Sbjct: 80  SKPIKVTLPDGKQVDAESWKTTPYQIACGISQGLADNTVIAKVNNVVWDLDRPLEEDCTL 139

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQP-FSSDE 118
           E++  ED  + AV  HS AHIM EA++ ++    +  GP IE+GFYYD   E+   SS++
Sbjct: 140 ELLKFEDEEAQAVYWHSSAHIMGEAMERVYGGC-LCYGPPIENGFYYDMYLEEGGVSSND 198

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
            + +E   ++II     F +  +  E    +F+     +K  IL         T+YR G 
Sbjct: 199 FSSLEALCKKIIKEKQAFERLEVKKETLLAMFKY--NKFKCRILNEKVNTPTTTVYRCGP 256

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLCRGPHVR TG++K   K+ K +  YW G ++   L RIYG ++   + L ++  F 
Sbjct: 257 LIDLCRGPHVRHTGKIK-ALKIHKNSSTYWEGKADMETLQRIYGISFPDPKMLKEWEKFQ 315

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
           EE++ RDHRK+ R+ +L+   E   G  F+  KG  I+  LI ++R + +   ++E+ TP
Sbjct: 316 EEAKNRDHRKIGRDQELYFFHELSPGSCFFLPKGAYIYNALIEFIRSEYRKRGFQEVVTP 375

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  LW  SGHW  Y  NMF+ +       +   FALKPMNCPGH  +F+H  +S+RE
Sbjct: 376 NIFNSRLWMTSGHWQHYSENMFSFEV------EKELFALKPMNCPGHCLMFDHRPRSWRE 429

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+RLA+FG ++RNE SG+L GL+RVR F QDDAH+FC  EQ+ +E     + + ++Y  
Sbjct: 430 LPLRLADFGVLHRNELSGALTGLIRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSV 489

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF   +  LSTRPEK +G   +WD AE  ++  L+      +      +  G+GAFYGP
Sbjct: 490 FGFSFKLN-LSTRPEKFLGDIEVWDQAEKQLENSLNEFGEKWE------LNSGDGAFYGP 542

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIG 536
           K +  +KDAIGR  QC TIQ+DF LP RFN  YV+    +K  PV++HRA+ GS+ER I 
Sbjct: 543 KIDIQIKDAIGRYHQCATIQLDFQLPIRFNLTYVSHDGDDKKRPVIVHRAILGSVERMIA 602

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKI 595
           I+ EN+ G  P WLSP Q +V  +  +  EYAQ++           + D     T+N KI
Sbjct: 603 ILTENYGGKWPFWLSPRQVMVVPVGPTCDEYAQKVRQQFHDAKFMADIDLDPGCTLNKKI 662

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           R   + +   I++ G+KE    ++ IR   +    + ++ + I  L +
Sbjct: 663 RNAQLAQYNFILVVGEKEKISGTVNIRTRDNKVHGERTISETIERLQQ 710


>gi|256026433|ref|ZP_05440267.1| threonyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289764445|ref|ZP_06523823.1| threonyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289716000|gb|EFD80012.1| threonyl-tRNA synthetase [Fusobacterium sp. D11]
          Length = 637

 Score =  622 bits (1604), Expect = e-176,   Method: Composition-based stats.
 Identities = 282/639 (44%), Positives = 405/639 (63%), Gaps = 17/639 (2%)

Query: 11  DGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRS 69
           +G  K F  +    ++A+  S SLAKK+V   ++GK  D+S  +  +  +E I  + P  
Sbjct: 6   NGESKEFNNNVNMFEIAKGFSNSLAKKSVGAKVDGKNVDMSYVLDHDAEVEFIDIDSPEG 65

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
             ++RHS AH+MA+AV  ++P+ +V IGP+IE+GFYYDFD  + F+ ++L +IE +M++I
Sbjct: 66  EDIVRHSTAHLMAQAVLRLYPDTKVTIGPVIENGFYYDFDPVEQFTEEDLEKIEAEMKKI 125

Query: 130 IARDSPFLKQYLSHEKARELFES-KKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           +  +    K  L  ++A + F    K  YKVEI+E+IP  E V+ Y+QG++ DLCRG HV
Sbjct: 126 VKENIKLEKYVLPRDEAIKYFRDVDKNKYKVEIVEAIPQGEQVSFYKQGDFTDLCRGTHV 185

Query: 189 RSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRK 248
            STG +K F KL  +AGAYWRG+S   ML RIYG +++ + +L ++L  +EE+EKRDHRK
Sbjct: 186 PSTGYLKAF-KLRALAGAYWRGNSKNKMLQRIYGYSFSNEDKLKKHLKLVEEAEKRDHRK 244

Query: 249 LAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQ 307
           L +E++LF ++E G G  F+  KG  +   L+   R++ +   Y ++ TP +L++ LW+ 
Sbjct: 245 LGKELELFFLSEYGPGFPFFLPKGMIVRNVLVDLWRKEHEKAGYLQLETPIMLNKELWEI 304

Query: 308 SGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGS 367
           SGHW +YR NM+  +       D   FA+KPMNCPG V  F H L SY++LP RLAE G 
Sbjct: 305 SGHWFNYRENMYTSEI------DEVEFAIKPMNCPGGVLAFKHQLHSYKDLPARLAELGK 358

Query: 368 VYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKL 427
           V+R+E SG+LHGLMRVR FTQDD+H+F T +Q+ +E + + NLI   Y      +  ++L
Sbjct: 359 VHRHEFSGALHGLMRVRSFTQDDSHIFMTPDQVQDEIIGVVNLIDKFYSKLFGFEYEIEL 418

Query: 428 STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAI 487
           ST+PEK +GS  +WD AE+ + G LD +           +  G+GAFYGPK ++ +KDAI
Sbjct: 419 STKPEKAIGSQEIWDMAESALAGALDKLGR------KYKINPGDGAFYGPKLDFKIKDAI 472

Query: 488 GRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           GR WQCGTIQ+DFNLP RF+  Y+    EK  PVM+HR ++GSIERFIGI+IE++ G  P
Sbjct: 473 GRMWQCGTIQLDFNLPERFDVTYIGEDGEKHRPVMLHRVIYGSIERFIGILIEHYAGAFP 532

Query: 548 LWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH-SIKKIPII 606
           +WL+P+Q  V TI    V YA+EI   L    +  E D R ETI YKIRE     +IP+ 
Sbjct: 533 MWLAPVQVKVMTINDECVPYAKEIMAKLDKLGIRAELDDRTETIGYKIREANGRYRIPMQ 592

Query: 607 IICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           +I G  E   + + IRRFGS      SL +    +  E+
Sbjct: 593 LIIGKNEVENKEVNIRRFGSKDQFSKSLDEFYNYVVDEA 631


>gi|33286920|gb|AAH55371.1| Threonyl-tRNA synthetase [Mus musculus]
          Length = 722

 Score =  622 bits (1604), Expect = e-176,   Method: Composition-based stats.
 Identities = 240/648 (37%), Positives = 362/648 (55%), Gaps = 23/648 (3%)

Query: 2   PSDIKLTFPDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
              IK+T PDG   +      T   +A  IS+ LA   V   +N  V DL  P+  + ++
Sbjct: 79  SKPIKVTLPDGKQVDAESWKTTPYQIACGISQGLADNTVVAKVNKVVWDLDRPLETDCTL 138

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQP-FSSDE 118
           E++  ED  + AV  HS AHIM EA++ ++    +  GP IE+GFYYD   E+   SS++
Sbjct: 139 ELLKFEDEEAQAVYWHSSAHIMGEAMERVYGGC-LCYGPPIENGFYYDMYLEEGGVSSND 197

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
            + +E   ++II     F +  +  E   E+F+     +K  IL         T+YR G 
Sbjct: 198 FSSLETLCKKIIKEKQTFERLEVKKETLLEMFKY--NKFKCRILNEKVNTPTTTVYRCGP 255

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLCRGPHVR TG++K   K+ K +  YW G ++   L RIYG ++   + L ++  F 
Sbjct: 256 LIDLCRGPHVRHTGKIKTL-KIHKNSSTYWEGKADMETLQRIYGISFPDPKLLKEWEKFQ 314

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
           EE++ RD+RK  R+ +L+   E   G  F+  KG  I+ TL+ ++R + +   ++E+ TP
Sbjct: 315 EEAKNRDYRKTGRDQELYFFHELSPGSCFFLPKGAYIYNTLMEFIRSEYRKRGFQEVVTP 374

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  LW  SGHW  Y  NMF+ +       +   FALKPMNCPGH  +F+H  +S+RE
Sbjct: 375 NIFNSRLWMTSGHWQHYSENMFSFEV------EKEQFALKPMNCPGHCLMFDHRPRSWRE 428

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+RLA+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E     + + ++Y  
Sbjct: 429 LPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSV 488

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF   +  LSTRPEK +G   +W+ AE  ++  L+      +      +  G+GAFYGP
Sbjct: 489 FGFSFKLN-LSTRPEKFLGDIEIWNQAEKQLENSLNEFGEKWE------LNPGDGAFYGP 541

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIG 536
           K +  +KDAIGR  QC TIQ+DF LP RFN  YV+    +K  PV++HRA+ GS+ER I 
Sbjct: 542 KIDIQIKDAIGRYHQCATIQLDFQLPIRFNLTYVSHDGDDKKRPVIVHRAILGSVERMIA 601

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKI 595
           I+ EN+ G  P WLSP Q +V  +  +  EYAQ++           +TD     T+N KI
Sbjct: 602 ILTENYGGKWPFWLSPRQVMVVPVGPTCDEYAQKVRQQFHDAKFMADTDLDPGCTLNKKI 661

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           R   + +   I++ G+KE +  ++ IR   +    + ++ + +  L +
Sbjct: 662 RNAQLAQYNFILVVGEKEKASGTVNIRTRDNKVHGERTVEETVRRLQQ 709


>gi|195443008|ref|XP_002069231.1| GK21088 [Drosophila willistoni]
 gi|194165316|gb|EDW80217.1| GK21088 [Drosophila willistoni]
          Length = 699

 Score =  622 bits (1603), Expect = e-176,   Method: Composition-based stats.
 Identities = 242/644 (37%), Positives = 365/644 (56%), Gaps = 22/644 (3%)

Query: 5   IKLTFPDGS-IKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           IK+T PDG  +      +T  D+A  IS+ LA   V   +NG+V DL   +     ++++
Sbjct: 61  IKVTLPDGKQVDATSWESTPYDIACVISKGLADNTVISKVNGEVWDLDRVLEGNCKLQLL 120

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQ 121
             +DP + AV  HS AHIM EA++ ++    +  GP I+ GFYYD   + +  S+++   
Sbjct: 121 KFDDPEAQAVFWHSSAHIMGEAMERLYGGH-LCYGPPIDGGFYYDMHLDGEGISTNDYGA 179

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +E  +++I+     F +  +      E+F+     +KV IL      +  T+Y+ G   D
Sbjct: 180 MESLVKQIVKEKQIFERLEMKKSDLLEMFKY--NEFKVRILNEKVTSDRTTVYKCGSLID 237

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHVR+TG+VK   K+ K +  YW G ++   L R+YG ++   ++L ++    EE+
Sbjct: 238 LCRGPHVRNTGKVK-ALKITKNSSTYWEGKADAESLQRVYGISFPDPKQLKEWEKLQEEA 296

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVL 300
            KRDHRK+ RE +LF   E   G  F+  +G  I+ TL+++M+ + +   ++E+ +P + 
Sbjct: 297 AKRDHRKIGREQELFFFHELSPGSCFFQPRGAHIYNTLMNFMKAEYRKRGFQEVISPNIY 356

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  LW  SGHW  Y  NMF+ +       +   FALKPMNCPGH  +F++  +S+RELP+
Sbjct: 357 NAKLWMTSGHWQHYAENMFSFEV------EKEKFALKPMNCPGHCLIFDNRNRSWRELPL 410

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+A+FG ++RNE SG+L GL RVR F QDDAH+FCT +Q+ +E     + +  +Y  FGF
Sbjct: 411 RMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCTPDQIKSEMKGCLDFLHHVYNIFGF 470

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
              +V LSTRPEK +G    W+DAE  +   LD         I      G+GAFYGPK +
Sbjct: 471 SFQLV-LSTRPEKYLGELEQWNDAEKALAESLDEFG------IPWKENPGDGAFYGPKID 523

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
             + DA+ R  QC TIQ+DF LP RFN  Y+    EK  PV+IHRA+ GS+ER I I+ E
Sbjct: 524 ITIMDALKRAHQCATIQLDFQLPIRFNLNYIADDGEKKRPVIIHRAILGSVERMIAILTE 583

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FRNETINYKIREHS 599
           N+ G  P WLSP Q +V  +  +  EYAQ +   L +     E D    +T+N KIR   
Sbjct: 584 NYAGKWPFWLSPRQVMVVPVGPAYDEYAQSVREQLHAAGFMSEADCDAGDTMNKKIRNAQ 643

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           + +   I++ GDKE S  ++ +R   +    +VS+ + I  L K
Sbjct: 644 LAQFNFILVVGDKERSSNTVNVRTRDNKVHGEVSVAELISKLQK 687


>gi|157413014|ref|YP_001483880.1| threonyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215]
 gi|166987324|sp|A8G3W3|SYT_PROM2 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|157387589|gb|ABV50294.1| Threonyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215]
          Length = 638

 Score =  622 bits (1603), Expect = e-176,   Method: Composition-based stats.
 Identities = 289/630 (45%), Positives = 420/630 (66%), Gaps = 15/630 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS K F    T  ++A+SI   LAK  +A  +N  + D + P+  +  + IIT +
Sbjct: 4   ITLPDGSKKVFEKSVTILEIAQSIGAGLAKATIAGKVNDVLLDATIPINSDSKVVIITSK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   + +IRHS AH++  AV+ I+ ++++AIGP+IEDGFYYD   E  F+ ++L +IE +
Sbjct: 64  DKEGIEIIRHSFAHLIGHAVKQIYSDIKMAIGPVIEDGFYYDIFSEYRFTPEDLIKIENR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           + ++I  +       +S ++A + F+ + E +K+ I+E IP +  + LY+  E+ D+CRG
Sbjct: 124 INKLIKTNYDVEILQVSKKEAIKTFKERDETFKLRIIEDIPEEGLINLYKHEEYIDMCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +T  ++ F KL+K++G+YWRG+S    L RIYGTAW  ++EL  YL  +EE+EKRD
Sbjct: 184 PHVPNTRHLRHF-KLLKLSGSYWRGNSENESLQRIYGTAWAKEKELNDYLKRIEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHL 304
           HRKL ++  LFHI E+  G+IFWH  GW I+Q L  Y+R  +K +DY EI TPQ +D+ L
Sbjct: 243 HRKLGKKHSLFHIQEESPGMIFWHPNGWTIYQVLEKYIREILKKNDYLEIKTPQAVDKSL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHW+ +R +MF       T  + RT+A+KPMNCP H+ VFN GLKSY++LP+RLAE
Sbjct: 303 WEKSGHWEKFRDDMFT------TASENRTYAIKPMNCPCHIQVFNQGLKSYKDLPIRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNEPSG+LHGLMRVR FTQDDAH+FCT+EQ+  E     +L+  +YK FGF++I+
Sbjct: 357 FGSCHRNEPSGALHGLMRVRNFTQDDAHIFCTEEQIQEEVSTFIDLVFEVYKTFGFDEII 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +KLSTRP+K+VGS+ +WD +E  +   LD         +   +  GEGAFYGPK E+ LK
Sbjct: 417 IKLSTRPKKKVGSEEIWDKSEEALTKALD------NKNLKWELQPGEGAFYGPKIEFSLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D + R WQCGTIQVDF++P R +A YV+  +EK +PVM+HRA+ GS ERFIGI+IE ++ 
Sbjct: 471 DCLNRVWQCGTIQVDFSMPIRLDATYVDIDNEKRNPVMLHRAILGSFERFIGILIEQYEA 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P+WL+P Q  + +IT   +E   +   LL ++      D RNE I YKIRE +++++P
Sbjct: 531 KFPIWLAPYQLTLLSITDRNIEKCLKFNELLINNGYRSTVDIRNEKIGYKIREATLERVP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           +I + GDKE    S+ +R          +L
Sbjct: 591 LIAVIGDKEEEIDSVSLRALDGRNLGIFNL 620


>gi|21428938|gb|AAM50188.1| GH20022p [Drosophila melanogaster]
          Length = 747

 Score =  622 bits (1603), Expect = e-176,   Method: Composition-based stats.
 Identities = 240/646 (37%), Positives = 362/646 (56%), Gaps = 22/646 (3%)

Query: 3   SDIKLTFPDGS-IKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIE 60
             IK+T PDG  +       T  +VA  IS+ LA   V   +NG+V DL   +    +++
Sbjct: 107 EPIKVTLPDGKQVDATSWETTPYEVARGISQGLADNTVISKVNGEVWDLDRVLEGNCTLQ 166

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDEL 119
           ++  +DP + AV  HS AHIM EA++ I+    +  GP IE+GFYYD   E +  S+++ 
Sbjct: 167 LLKFDDPEAQAVFWHSSAHIMGEAMERIYGGH-LCYGPPIENGFYYDMHLEGEGISTNDY 225

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             +E  +++I+     F +  +      E+F+     +KV IL      +  T+Y+ G  
Sbjct: 226 GAMEGLVKQIVKEKQNFERLEMKKSDLLEMFKY--NEFKVRILNEKVTTDRTTVYKCGSL 283

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHVR TG+VK   K+ K +  YW G ++   L R+YG ++   ++L ++    E
Sbjct: 284 IDLCRGPHVRHTGKVK-ALKITKNSPTYWEGKADAETLQRVYGISFPDPKQLKEWEKLQE 342

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+ KRDHRK+ RE +LF   E   G  F+  +G  I+ TL+ +++ + +   ++E+ +P 
Sbjct: 343 EAAKRDHRKIGREQELFFFHELSPGSCFFQPRGAHIYNTLMGFIKAEYRKRGFQEVISPN 402

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           + +  LW  SGHW  Y  NMF+ +       +   FALKPMNCPGH  +F++  +S+REL
Sbjct: 403 IYNAKLWMTSGHWQHYAENMFSFE------AEKEKFALKPMNCPGHCLIFDNRNRSWREL 456

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+A+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E       +  +Y  F
Sbjct: 457 PLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAPEQIKSEMKGCLEFLKYVYTIF 516

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF   +V LSTRP+  +G    W+DAE  +   L+      ++        G+GAFYGPK
Sbjct: 517 GFSFQLV-LSTRPDNYLGELEQWNDAEKALAESLNEFGMPWKE------NPGDGAFYGPK 569

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +  + DA+ R  QC TIQ+DF LP RFN  Y+    EK  PV+IHRA+ GS+ER I I+
Sbjct: 570 IDITIMDALKRAHQCATIQLDFQLPIRFNLSYIADDGEKKRPVIIHRAILGSVERMIAIL 629

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FRNETINYKIRE 597
            ENF G  P WLSP Q +V  +  +  +YAQ + + L       E D    +T+N KIR 
Sbjct: 630 TENFAGKWPFWLSPRQVMVVPVGPAYDQYAQSVRDQLHDAGFMSEADCDAGDTMNKKIRN 689

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             + +   I++ GDKE S  ++ +R   +    +VS+ + I  L K
Sbjct: 690 AQLAQFNFILVVGDKERSSNTVNVRTRDNKVHGEVSVAELITKLQK 735


>gi|225619668|ref|YP_002720925.1| threonyl-tRNA synthetase [Brachyspira hyodysenteriae WA1]
 gi|225214487|gb|ACN83221.1| threonyl-tRNA synthetase [Brachyspira hyodysenteriae WA1]
          Length = 643

 Score =  622 bits (1603), Expect = e-176,   Method: Composition-based stats.
 Identities = 279/638 (43%), Positives = 412/638 (64%), Gaps = 18/638 (2%)

Query: 12  GSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSD-PVREGSIEIITPEDPRSL 70
           G   +     +  D  +  ++  +K AVA   NG   DL+  P  +G +E+I       L
Sbjct: 8   GQSYDLSNGESLLDFLKQNAKKDSKDAVAAKFNGTQVDLTYTPETDGDLELILTTSDDGL 67

Query: 71  AVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEII 130
            ++RHS +H+MA+AV+ ++P  QV IGP I+DGFYYDFD E+PF+ ++L +IE +M++II
Sbjct: 68  EILRHSTSHLMAQAVRRLYPNTQVTIGPAIKDGFYYDFDAEKPFTEEDLPKIEDEMKKII 127

Query: 131 ARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRS 190
             + P +++ ++  +A E F+   E YKVEI+E I A   V+ Y QG++ DLCRGPHV S
Sbjct: 128 KENIPVVRKVMNKNEAIEYFKKANEPYKVEIIEGIDAD-TVSFYEQGDFIDLCRGPHVPS 186

Query: 191 TGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLA 250
           TG +K  +KLM VAG+YWRGDSN  MLSRIYGTA+ +++ L +YL  L+E+++RDHRKL 
Sbjct: 187 TGYLK-AYKLMSVAGSYWRGDSNNKMLSRIYGTAFESKESLDKYLKKLKEAKERDHRKLG 245

Query: 251 REMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSG 309
           +E++LF   ++G G  FWH +G  I++ + SY+R +     Y EI TP +L++ LW +SG
Sbjct: 246 KELNLFSFHDEGPGFPFWHPRGMIIYKAVESYIRNENDKRGYVEIKTPAILNEELWHRSG 305

Query: 310 HWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVY 369
           HWD+Y+ NM+       T  D   +A+KPMNCPG + V+N  + SYR+LP+R+AE G V+
Sbjct: 306 HWDNYKENMYF------TEIDETKYAVKPMNCPGGLIVYNSNIHSYRDLPLRVAELGFVH 359

Query: 370 RNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
           R+E SG+LHGL RVR FTQDDAH+FCT+EQ+ +E +      +S+YKDFGFE   + +ST
Sbjct: 360 RHELSGALHGLFRVRAFTQDDAHIFCTEEQLGDEIINTIEYYLSVYKDFGFENFEIFVST 419

Query: 430 RPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGR 489
           RP K +GSD +W+ A   +   LD +K      I+  +  G+GAFYGPK ++ +KD + R
Sbjct: 420 RPAKSIGSDEIWELATKSLINALDKLK------ISYKINEGDGAFYGPKIDFNIKDVLDR 473

Query: 490 DWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW 549
           +WQCGT+QVDF+LP RF   Y     +K  PVM+HRA+ GS+ERFIGI++E++ G  PLW
Sbjct: 474 NWQCGTLQVDFSLPMRFEISYEGKDGKKHTPVMLHRAILGSMERFIGILVEHYNGKFPLW 533

Query: 550 LSPIQAIVTTITSS--AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIII 607
           LSP+Q  V  + +    ++   E+A  LK     +E D  N+ +  KI+++ +++ P  +
Sbjct: 534 LSPLQVAVVNVLNEKPQIDRTNEVAKALKDAGFRVEVDESNDNLGTKIKKYRLQRTPYTV 593

Query: 608 ICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           I G +E S   + IR   S   + + L + I  L KES
Sbjct: 594 IIGAEEVSSGKLSIRTRSSQEIKDMDLNEFIEKLKKES 631


>gi|126321714|ref|XP_001373481.1| PREDICTED: hypothetical protein [Monodelphis domestica]
          Length = 723

 Score =  622 bits (1603), Expect = e-176,   Method: Composition-based stats.
 Identities = 244/648 (37%), Positives = 365/648 (56%), Gaps = 23/648 (3%)

Query: 2   PSDIKLTFPDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
              IK+T PDG   +      T   VA  IS+ LA   V   +N  V DL  P+  + ++
Sbjct: 80  SQPIKVTLPDGKQVDAESWKTTPYQVACGISQGLADNTVIAKVNKVVWDLDRPLEEDCTL 139

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQP-FSSDE 118
           E++  ED  + AV  HS AHIM EA++ ++    +  GP IE+GFYYD   E    SS++
Sbjct: 140 ELLKFEDEEAQAVYWHSSAHIMGEAMERVYGGC-LCYGPPIENGFYYDMYLENGGVSSND 198

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
            + +E   ++II     F +  +  E   E+F+     +K  IL         T+YR G 
Sbjct: 199 FSALETLCKKIIKEKQLFERLEVKKETLLEMFKY--NKFKCRILNEKVNTPTTTVYRCGP 256

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLCRGPHVR TG++K   K+ K +  YW G ++   L R+YG ++   + L ++  F 
Sbjct: 257 LIDLCRGPHVRHTGKIKTL-KIHKNSSTYWEGKADMETLQRVYGISFPDPKMLKEWEKFQ 315

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
           EE++ RDHRK+ R+ +L+   E   G  F+  KG  I+ TL+ ++R + +   ++E+ TP
Sbjct: 316 EEAKNRDHRKIGRDQELYFFHELSPGSCFFMPKGAYIYNTLVEFIRNEYRKRGFQEVVTP 375

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  LW  SGHW  Y  NMF+ +       +   FALKPMNCPGH  +F+H  +S+RE
Sbjct: 376 NIYNSKLWLTSGHWQHYSENMFSFEV------EKEIFALKPMNCPGHCLMFDHRPRSWRE 429

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+RLA+FG ++RNE SG+L GL RVR F QDDAH+FCT EQ+  E     + + ++Y  
Sbjct: 430 LPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCTMEQIEEEIKNCLDFLRTVYNV 489

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF   +  LSTRPEK +G   +W+ AE  ++  L+      +      +  G+GAFYGP
Sbjct: 490 FGFSFKLN-LSTRPEKFLGDVEIWNQAEKQLESSLNEFGEKWE------LNPGDGAFYGP 542

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIG 536
           K +  +KDAIGR  QC TIQ+DF LP RFN  YV+    +K  PV+IHRA+ GS+ER I 
Sbjct: 543 KIDIQIKDAIGRYHQCATIQLDFQLPIRFNLTYVSHDGDDKKRPVIIHRAILGSVERMIA 602

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKI 595
           I+ EN+ G  P WLSP Q +V  +  +  EYAQ++     + +L  ++D     T+N KI
Sbjct: 603 ILTENYGGKWPFWLSPRQVMVVPVGPTCDEYAQKVQQQFHNANLMTDSDLDPGCTLNKKI 662

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           R   + +   I++ G+KE +  ++ IR   +    + ++ + I  L +
Sbjct: 663 RNAQLAQYNFILVVGEKEKTSGTVNIRTRDNKVHGERTVSETIERLQQ 710


>gi|260494526|ref|ZP_05814656.1| threonyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
 gi|260197688|gb|EEW95205.1| threonyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
          Length = 637

 Score =  622 bits (1603), Expect = e-176,   Method: Composition-based stats.
 Identities = 282/639 (44%), Positives = 405/639 (63%), Gaps = 17/639 (2%)

Query: 11  DGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRS 69
           +G  K F  +    ++A+  S SLAKK+V   ++GK  D+S  +  +  +E I  + P  
Sbjct: 6   NGESKEFNNNVNMFEIAKGFSNSLAKKSVGAKVDGKNVDMSYVLDHDAEVEFIDIDSPEG 65

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
             ++RHS AH+MA+AV  ++P+ +V IGP+IE+GFYYDFD  + F+ ++L +IE +M++I
Sbjct: 66  EDIVRHSTAHLMAQAVLRLYPDTKVTIGPVIENGFYYDFDPVEQFTEEDLEKIEAEMKKI 125

Query: 130 IARDSPFLKQYLSHEKARELFES-KKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           +  +    K  L  ++A + F    K  YKVEI+E+IP  E V+ Y+QG++ DLCRG HV
Sbjct: 126 VKENIKLEKYVLPRDEAIKYFRDVDKNKYKVEIVEAIPQGEQVSFYKQGDFTDLCRGTHV 185

Query: 189 RSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRK 248
            STG +K F KL  +AGAYWRG+S   ML RIYG +++ + +L ++L  +EE+EKRDHRK
Sbjct: 186 PSTGYLKAF-KLRALAGAYWRGNSKNKMLQRIYGYSFSNEDKLKKHLKLVEEAEKRDHRK 244

Query: 249 LAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQ 307
           L +E++LF ++E G G  F+  KG  +   L+   R++ +   Y ++ TP +L++ LW+ 
Sbjct: 245 LGKELELFFLSEYGPGFPFFLPKGMIVRNVLVDLWRKEHEKAGYLQLETPIMLNKELWEI 304

Query: 308 SGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGS 367
           SGHW +YR NM+  +       D   FA+KPMNCPG V  F H L SY++LP RLAE G 
Sbjct: 305 SGHWFNYRENMYTSEI------DEVEFAIKPMNCPGGVLAFKHQLHSYKDLPARLAELGK 358

Query: 368 VYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKL 427
           V+R+E SG+LHGLMRVR FTQDD+H+F T +Q+ +E + + NLI   Y      +  ++L
Sbjct: 359 VHRHEFSGALHGLMRVRSFTQDDSHIFMTPDQVQDEIIGVVNLIDKFYSKLFGFEYEIEL 418

Query: 428 STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAI 487
           ST+PEK +GS  +WD AE+ + G LD +           +  G+GAFYGPK ++ +KDAI
Sbjct: 419 STKPEKAIGSQEIWDMAESALAGALDKLGR------KYKINPGDGAFYGPKLDFKIKDAI 472

Query: 488 GRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           GR WQCGTIQ+DFNLP RF+  Y+    EK  PVM+HR ++GSIERFIGI+IE++ G  P
Sbjct: 473 GRMWQCGTIQLDFNLPERFDVTYIGEDGEKHRPVMLHRVIYGSIERFIGILIEHYAGAFP 532

Query: 548 LWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH-SIKKIPII 606
           +WL+P+Q  V TI    V YA+EI   L    +  E D R ETI YKIRE     +IP+ 
Sbjct: 533 MWLAPVQVKVMTINDECVPYAKEIMAKLDELGIRAELDDRTETIGYKIREANGRYRIPMQ 592

Query: 607 IICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           +I G  E   + + IRRFGS      SL +    +  E+
Sbjct: 593 LIIGKNEVENKEVNIRRFGSKDQFSKSLDEFYNYVVDEA 631


>gi|114600748|ref|XP_001153418.1| PREDICTED: threonyl-tRNA synthetase isoform 2 [Pan troglodytes]
 gi|114600750|ref|XP_001153486.1| PREDICTED: threonyl-tRNA synthetase isoform 3 [Pan troglodytes]
 gi|114600752|ref|XP_001153550.1| PREDICTED: threonyl-tRNA synthetase isoform 4 [Pan troglodytes]
          Length = 664

 Score =  622 bits (1603), Expect = e-176,   Method: Composition-based stats.
 Identities = 242/648 (37%), Positives = 359/648 (55%), Gaps = 23/648 (3%)

Query: 2   PSDIKLTFPDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
              IK+T PDG   +      T   +A  IS+ LA   V   +N  V DL  P+  + S+
Sbjct: 21  SKPIKVTLPDGKQVDAESWKTTPYQIACGISQGLADNTVIAKVNNLVWDLDRPLEEDCSL 80

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQP-FSSDE 118
           E++  ED  + AV  HS AHIM EA++ ++    +  GP IE+GFYYD   E+   SS++
Sbjct: 81  ELLKFEDEEAQAVYWHSSAHIMGEAMERVYGGC-LCYGPPIENGFYYDMYLEEGGVSSND 139

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
            + +E   ++II     F +  +  E    +F+     +K  IL         T+YR G 
Sbjct: 140 FSSLEALCKKIIKEKQAFERLEVKKETLLAMFKY--NKFKCRILNEKVNTPTTTVYRCGP 197

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLCRGPHVR TG++K   K+ K +  YW G ++   L RIYG ++   + L ++  F 
Sbjct: 198 LIDLCRGPHVRHTGKIK-ALKIHKNSSTYWEGKADMETLQRIYGISFPDPKMLKEWEKFQ 256

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
           EE++ RDHRK+ R+ +L+   E   G  F+  KG  I+  LI ++R + +   ++E+ TP
Sbjct: 257 EEAKNRDHRKIGRDQELYFFHELSPGSCFFLPKGAYIYNALIEFIRSEYRKRGFQEVVTP 316

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  LW  SGHW  Y  NMF+ +       +   FALKPMNCPGH  +F+H  +S+RE
Sbjct: 317 NIFNSRLWMTSGHWQHYSENMFSFEV------EKELFALKPMNCPGHCLMFDHRPRSWRE 370

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+RLA+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E     + + ++Y  
Sbjct: 371 LPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSV 430

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF   +  LSTRPEK +G   +WD AE  ++  L+      +      +  G+GAFYGP
Sbjct: 431 FGFSFKLN-LSTRPEKFLGDIEVWDQAEKQLENSLNEFGEKWE------LNSGDGAFYGP 483

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIG 536
           K +  +KDAIGR  QC TIQ+DF LP RFN  YV+    +K  PV++HRA+ GS+ER I 
Sbjct: 484 KIDIQIKDAIGRYHQCATIQLDFQLPIRFNLTYVSHDGDDKKRPVIVHRAILGSVERMIA 543

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKI 595
           I+ EN+ G  P WLSP Q +V  +  +  EYAQ++           + D     T+N KI
Sbjct: 544 ILTENYGGKWPFWLSPRQVMVVPVGPTCDEYAQKVRQQFHDAKFMADIDLDPGCTLNKKI 603

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           R   + +   I++ G+KE    ++ IR   +    + ++ + I  L +
Sbjct: 604 RNAQLAQYNFILVVGEKEKISGTVNIRTRDNKVHGERTISETIERLQQ 651


>gi|260062396|ref|YP_003195476.1| threonyl-tRNA synthetase [Robiginitalea biformata HTCC2501]
 gi|88783959|gb|EAR15130.1| threonyl-tRNA synthetase [Robiginitalea biformata HTCC2501]
          Length = 646

 Score =  621 bits (1602), Expect = e-176,   Method: Composition-based stats.
 Identities = 255/656 (38%), Positives = 391/656 (59%), Gaps = 20/656 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            I++T PDG     P  +T  DVA  IS  LA+  ++   N +  + + P+  +G + + 
Sbjct: 1   MIEITLPDGKTVEHPKGSTPLDVARGISEGLARNVISARFNNRKVEAATPLEEDGKLILY 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
           T  D        HS +H++A+A++ ++P +++ IGP I++GFYYD D  E   S  +   
Sbjct: 61  TWRDEEGKKAFWHSSSHVLAQALEELYPGIKLTIGPAIDNGFYYDVDLGEHTISEKDFPA 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEKK  EI      F  + +S + A   ++ ++  YK+E++E++   + +T      + D
Sbjct: 121 IEKKALEIARGKHDFRMREVSKKDALAYYKDERNPYKLELIENLEDGD-ITFCDHDTFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG H+ +TG +K F K++ VAGAYWRGD NRP L+R+YG ++  Q+ELT+YL+ LEE+
Sbjct: 180 LCRGGHIPNTGLIKAF-KVLNVAGAYWRGDENRPQLTRVYGISFPKQKELTEYLHMLEEA 238

Query: 242 EKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           +KRDHRKL +E++LF    + G G+  W  KG  + + L  ++++ + K  YE + TP +
Sbjct: 239 KKRDHRKLGKELELFTFSHKVGQGLPLWLPKGAALRERLEQFLKKAQKKAGYEMVVTPHI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             + L+  SGH+  Y  + F       T ++   F LKPMNCP H  +FN    SYR+LP
Sbjct: 299 GQKELYVTSGHYAKYGEDSFQ---PIHTPREDEEFLLKPMNCPHHCEIFNATPVSYRDLP 355

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
            R AEFG+VYR E SG LHGL RVRGFTQDDAH+FCT +Q+  E   + +L + +    G
Sbjct: 356 KRFAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCTHDQLDEEFKNVIDLSLYVLGSLG 415

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           FE    ++S R  +     +G    W+ AE  +      I  +++  ++  +  GE AFY
Sbjct: 416 FENFTAQVSIRDPEKPEKYIGEVENWEKAEAAI------IHAATEKGLDFVIEPGEAAFY 469

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDA+GR WQ GTIQVD+ LP RF+  Y  S +E   PVMIHRA FGS+ERF+
Sbjct: 470 GPKLDFMVKDALGRQWQLGTIQVDYTLPERFDLTYKGSDNELHRPVMIHRAPFGSMERFV 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            +++E+  GN PLWL+P QAIV  ++     YAQ++ N L++H +    D R+ET+  KI
Sbjct: 530 ALLLEHTGGNFPLWLTPQQAIVLPVSEKHENYAQKVLNSLENHEIRALLDARSETVGKKI 589

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           RE  + K P +II GD+E ++ +I +RR G      +++ +A+  L KE +    +
Sbjct: 590 REAEMGKYPFMIIVGDQEMTDGTISVRRHGGEDLGSITV-EALSGLVKEEINSTLK 644


>gi|74142262|dbj|BAE31895.1| unnamed protein product [Mus musculus]
          Length = 722

 Score =  621 bits (1602), Expect = e-175,   Method: Composition-based stats.
 Identities = 240/648 (37%), Positives = 362/648 (55%), Gaps = 23/648 (3%)

Query: 2   PSDIKLTFPDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
              IK+T PDG   +      T   +A  IS+ LA   V   +N  V DL  P+  + ++
Sbjct: 79  SKPIKVTLPDGKQVDAESWKTTPYQIACGISQGLADNTVVAKVNKVVWDLDRPLETDCTL 138

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQP-FSSDE 118
           E++  ED  + AV  HS AHIM EA++ ++    +  GP IE+GFYYD   E+   SS++
Sbjct: 139 ELLKFEDEEAQAVYWHSNAHIMGEAMERVYGGC-LCYGPPIENGFYYDMYLEEGGVSSND 197

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
            + +E   ++II     F +  +  E   E+F+     +K  IL         T+YR G 
Sbjct: 198 FSSLETLCKKIIKEKQTFERLEVKKETLLEMFKY--NKFKCRILNEKVNTPTTTVYRCGP 255

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLCRGPHVR TG++K   K+ K +  YW G ++   L RIYG ++   + L ++  F 
Sbjct: 256 LIDLCRGPHVRHTGKIKTL-KIHKNSSTYWEGKADMETLQRIYGISFPDPKLLKEWEKFQ 314

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
           EE++ RDHRK+ R+ +L+   E   G  F+  KG  I+ TL+ ++R + +   ++E+ TP
Sbjct: 315 EEAKNRDHRKIGRDQELYFFHELSPGSCFFLPKGAYIYNTLMEFIRSEYRKRGFQEVVTP 374

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  LW  SGHW  Y  NMF+ +       +   FALKPMNCPGH  +F+H  +S+RE
Sbjct: 375 NIFNSRLWMTSGHWQHYSENMFSFEV------EKEQFALKPMNCPGHCLMFDHRPRSWRE 428

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+RLA+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E     + + ++Y  
Sbjct: 429 LPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSV 488

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF   +  LSTRPEK +G   +W+ AE  ++  L+      +      +  G+GAFYGP
Sbjct: 489 FGFSFKLN-LSTRPEKFLGDIEIWNQAEKQLENSLNEFGEKWE------LNPGDGAFYGP 541

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIG 536
           K +  +KDAIGR  QC TIQ+DF LP RFN  YV+    +K  PV++HRA+ GS+ER I 
Sbjct: 542 KIDIQIKDAIGRYHQCATIQLDFQLPIRFNLTYVSHDGDDKKRPVIVHRAILGSVERMIA 601

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKI 595
           I+ E + G  P WLSP Q +V  +  +  EYAQ++           +TD     T+N KI
Sbjct: 602 ILTEKYGGKWPFWLSPRQVMVVPVGPTCDEYAQKVRQQFHDAKFMADTDLDPGCTLNKKI 661

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           R   + +   I++ G+KE +  ++ IR   +    + ++ + +  L +
Sbjct: 662 RNAQLAQYNFILVVGEKEKASGTVNIRTRDNKVHGERTVEETVRRLQQ 709


>gi|291395207|ref|XP_002714160.1| PREDICTED: threonyl-tRNA synthetase-like [Oryctolagus cuniculus]
          Length = 723

 Score =  621 bits (1602), Expect = e-175,   Method: Composition-based stats.
 Identities = 240/648 (37%), Positives = 362/648 (55%), Gaps = 23/648 (3%)

Query: 2   PSDIKLTFPDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
              IK+T PDG   +      T   +A  IS+ LA   V   +N  V DL  P+  + ++
Sbjct: 80  SKPIKVTLPDGKQVDAESWKTTPYQIACGISQGLADNTVIAKVNKVVWDLDRPLEEDCTL 139

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQP-FSSDE 118
           E++  ED  + AV  HS AHIM EA++ ++    +  GP IE+GFYYD   E+   SS++
Sbjct: 140 ELLKFEDEEAQAVYWHSSAHIMGEAMERVYGGC-LCYGPPIENGFYYDMYLEEGGVSSND 198

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
            A +E   ++I+     F +  +  E   E+F+     +K  IL         T+YR G 
Sbjct: 199 FASLETVCKKIMKEKQAFERLEVKKETLLEMFKY--NKFKCRILNEKVNTPTTTVYRCGP 256

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLCRGPHVR TG++K   K+ K +  YW G ++   L RIYG ++   + L ++  F 
Sbjct: 257 LIDLCRGPHVRHTGKIKTL-KIHKNSSTYWEGKADMETLQRIYGISFPDPKMLKEWEKFQ 315

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
           EE++ RDHRK+ R+ +L+   E   G  F+  KG  I+ TL+ ++R + +   ++E+ TP
Sbjct: 316 EEAKNRDHRKIGRDQELYFFHELSPGSCFFLPKGAYIYNTLMEFIRSEYRKRGFQEVVTP 375

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  LW  SGHW  Y  NMF+ +       +   FALKPMNCPGH  +F+H  +S+RE
Sbjct: 376 NIYNSRLWMTSGHWQHYSENMFSFEV------EKELFALKPMNCPGHCLMFDHRPRSWRE 429

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+A+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E     + + ++Y  
Sbjct: 430 LPLRVADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYNV 489

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF   +  LSTRPEK +G   +W+ AE  ++  L+      +      +  G+GAFYGP
Sbjct: 490 FGFSFKLN-LSTRPEKFLGDIEVWNQAEKQLENSLNEFGEKWE------LNPGDGAFYGP 542

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIG 536
           K +  +KDAIGR  QC TIQ+DF LP RFN  +V+    +K  PV+IHRA+ GS+ER I 
Sbjct: 543 KIDIQIKDAIGRYHQCATIQLDFQLPIRFNLTFVSHDGDDKKRPVIIHRAILGSVERMIA 602

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKI 595
           I+ EN+ G  P WLSP Q +V  +  +  EYAQ++           + D     T+N KI
Sbjct: 603 ILTENYGGKWPFWLSPRQVMVVPVGPTCDEYAQKVRQQFHDAKFMADIDLDAGCTLNKKI 662

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           R   + +   I++ G+KE +  ++ IR   +    + ++ + I  L +
Sbjct: 663 RNAQLAQYNFILVVGEKEKTSGTVNIRTRDNKVHGERTISETIERLQQ 710


>gi|195114918|ref|XP_002002014.1| GI17149 [Drosophila mojavensis]
 gi|193912589|gb|EDW11456.1| GI17149 [Drosophila mojavensis]
          Length = 691

 Score =  621 bits (1602), Expect = e-175,   Method: Composition-based stats.
 Identities = 241/646 (37%), Positives = 368/646 (56%), Gaps = 22/646 (3%)

Query: 3   SDIKLTFPDGS-IKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIE 60
           + IK+T PDG  +       T  +VA  IS+ LA   V   +NG+V DL   +  + +++
Sbjct: 51  TPIKVTLPDGKQVDATAWETTPYEVARGISQGLADNTVISKVNGEVWDLDRVLEGDCTLQ 110

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDEL 119
           ++  +DP + AV  HS AHIM EA++ I+    +  GP IE+GFYYD   E +  S+++ 
Sbjct: 111 LLKFDDPEAQAVFWHSSAHIMGEAMERIYGGH-LCYGPPIENGFYYDMHLEGEGISTNDY 169

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             +E  +++I+     F +  +      E+F+     +KV IL      +  T+Y+ G  
Sbjct: 170 GTMETLIKQIVKEKQNFERLEMKKSDLLEMFKY--NEFKVRILNEKVTSDRTTVYKCGSL 227

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHVR TG+VK   K+ K +  YW G ++   L R+YG ++   ++L ++    E
Sbjct: 228 IDLCRGPHVRHTGKVK-ALKITKNSSTYWEGKADAETLQRVYGISFPDPKQLKEWEKLQE 286

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+ KRDHRK+ RE +LF   E   G  F+  +G  I+ TL++ +R + +   ++E+ +P 
Sbjct: 287 EAAKRDHRKIGREQELFFFHELSPGSCFFQPRGAHIYNTLMNLIRGEYRKRGFQEVISPN 346

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           + +  LW  SGHW  Y  NMF+ +       +   FALKPMNCPGH  +F++  +S+REL
Sbjct: 347 IYNAKLWMTSGHWQHYADNMFSFE------AEKEKFALKPMNCPGHCLIFDNRNRSWREL 400

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+A+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E     + +  +Y  F
Sbjct: 401 PLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAPEQIKSEMKGCLDFLRHVYTIF 460

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF   +V LSTRP+K +G    WD AE  +   L+      ++        G+GAFYGPK
Sbjct: 461 GFSFQLV-LSTRPDKYLGELDQWDAAEKALAESLNEFGMPWKE------NPGDGAFYGPK 513

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +  + DA+ R +QC TIQ+DF LP RFN  Y+    EK  PV+IHRA+ GS+ER I I+
Sbjct: 514 IDITIMDALKRPFQCATIQLDFQLPIRFNLNYIADDGEKRRPVIIHRAILGSVERMIAIL 573

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FRNETINYKIRE 597
            EN+ G  P WLSP Q +V  +  +  EYA+ + + L +     E D    +T+N KIR 
Sbjct: 574 TENYAGKWPFWLSPRQVMVVPVGPAYDEYAKTVRDELYAAGFMSEVDCDAGDTMNKKIRN 633

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             + +   I++ GDKE S +++ +R   +    +VS+ + I  L K
Sbjct: 634 AQLAQFNFILVVGDKERSSKTVNVRTRDNKVHGEVSVAELISKLQK 679


>gi|114600738|ref|XP_517835.2| PREDICTED: threonyl-tRNA synthetase isoform 10 [Pan troglodytes]
 gi|114600740|ref|XP_001153787.1| PREDICTED: threonyl-tRNA synthetase isoform 6 [Pan troglodytes]
 gi|114600742|ref|XP_001153971.1| PREDICTED: threonyl-tRNA synthetase, cytoplasmic isoform 9 [Pan
           troglodytes]
          Length = 723

 Score =  621 bits (1601), Expect = e-175,   Method: Composition-based stats.
 Identities = 242/648 (37%), Positives = 359/648 (55%), Gaps = 23/648 (3%)

Query: 2   PSDIKLTFPDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
              IK+T PDG   +      T   +A  IS+ LA   V   +N  V DL  P+  + S+
Sbjct: 80  SKPIKVTLPDGKQVDAESWKTTPYQIACGISQGLADNTVIAKVNNLVWDLDRPLEEDCSL 139

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQP-FSSDE 118
           E++  ED  + AV  HS AHIM EA++ ++    +  GP IE+GFYYD   E+   SS++
Sbjct: 140 ELLKFEDEEAQAVYWHSSAHIMGEAMERVYGGC-LCYGPPIENGFYYDMYLEEGGVSSND 198

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
            + +E   ++II     F +  +  E    +F+     +K  IL         T+YR G 
Sbjct: 199 FSSLEALCKKIIKEKQAFERLEVKKETLLAMFKY--NKFKCRILNEKVNTPTTTVYRCGP 256

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLCRGPHVR TG++K   K+ K +  YW G ++   L RIYG ++   + L ++  F 
Sbjct: 257 LIDLCRGPHVRHTGKIK-ALKIHKNSSTYWEGKADMETLQRIYGISFPDPKMLKEWEKFQ 315

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
           EE++ RDHRK+ R+ +L+   E   G  F+  KG  I+  LI ++R + +   ++E+ TP
Sbjct: 316 EEAKNRDHRKIGRDQELYFFHELSPGSCFFLPKGAYIYNALIEFIRSEYRKRGFQEVVTP 375

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  LW  SGHW  Y  NMF+ +       +   FALKPMNCPGH  +F+H  +S+RE
Sbjct: 376 NIFNSRLWMTSGHWQHYSENMFSFEV------EKELFALKPMNCPGHCLMFDHRPRSWRE 429

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+RLA+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E     + + ++Y  
Sbjct: 430 LPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSV 489

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF   +  LSTRPEK +G   +WD AE  ++  L+      +      +  G+GAFYGP
Sbjct: 490 FGFSFKLN-LSTRPEKFLGDIEVWDQAEKQLENSLNEFGEKWE------LNSGDGAFYGP 542

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIG 536
           K +  +KDAIGR  QC TIQ+DF LP RFN  YV+    +K  PV++HRA+ GS+ER I 
Sbjct: 543 KIDIQIKDAIGRYHQCATIQLDFQLPIRFNLTYVSHDGDDKKRPVIVHRAILGSVERMIA 602

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKI 595
           I+ EN+ G  P WLSP Q +V  +  +  EYAQ++           + D     T+N KI
Sbjct: 603 ILTENYGGKWPFWLSPRQVMVVPVGPTCDEYAQKVRQQFHDAKFMADIDLDPGCTLNKKI 662

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           R   + +   I++ G+KE    ++ IR   +    + ++ + I  L +
Sbjct: 663 RNAQLAQYNFILVVGEKEKISGTVNIRTRDNKVHGERTISETIERLQQ 710


>gi|77735697|ref|NP_001029542.1| threonyl-tRNA synthetase, cytoplasmic [Bos taurus]
 gi|110287979|sp|Q3ZBV8|SYTC_BOVIN RecName: Full=Threonyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|73586669|gb|AAI03083.1| Threonyl-tRNA synthetase [Bos taurus]
 gi|296475710|gb|DAA17825.1| threonyl-tRNA synthetase [Bos taurus]
          Length = 723

 Score =  621 bits (1601), Expect = e-175,   Method: Composition-based stats.
 Identities = 242/648 (37%), Positives = 365/648 (56%), Gaps = 23/648 (3%)

Query: 2   PSDIKLTFPDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
              IK+T PDG   +      T   +A  IS+ LA   V   +N  V DL  P+  + ++
Sbjct: 80  SKPIKVTLPDGKQVDAESWKTTPYQIACGISQGLADNTVIAKVNKAVWDLDRPLEEDCTL 139

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQP-FSSDE 118
           E++  ED  + AV  HS AHIM EA++ ++    +  GP IE+GFYYD   E+   SS++
Sbjct: 140 ELLKFEDEEAQAVYWHSSAHIMGEAMERVYGGC-LCYGPPIENGFYYDMYLEEGGVSSND 198

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
            + +E   ++II     F +  +  E   E+F+     +K  IL         T+YR G 
Sbjct: 199 FSSLETLCKKIIKEKQAFERLEVKKETLLEMFKY--NKFKCRILNEKVNTPTTTVYRCGP 256

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLCRGPHVR TG++K   K+ K +  YW G S+   L RIYG ++   + L ++  F 
Sbjct: 257 LIDLCRGPHVRHTGKIKTL-KIHKNSSTYWEGKSDMETLQRIYGISFPDPKMLKEWEKFQ 315

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
           EE++ RDHRK+ R+ +L+   E   G  F+  KG  I+ TLI ++R + +   ++E+ TP
Sbjct: 316 EEAKNRDHRKIGRDQELYFFHELSPGSCFFLPKGAYIYNTLIEFIRSEYRKRGFQEVVTP 375

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  LW  SGHW+ Y  NMF+ +       +   FALKPMNCPGH  +F+H  +S+RE
Sbjct: 376 NIYNSRLWVTSGHWEHYSENMFSFEV------EKELFALKPMNCPGHCLMFDHRPRSWRE 429

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+A+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E     + + ++Y  
Sbjct: 430 LPLRVADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSI 489

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF   +  LSTRPEK +G   +W+ AE  ++  L+      +      +  G+GAFYGP
Sbjct: 490 FGFSFKLN-LSTRPEKFLGDIEVWNQAEKQLENSLNDFGEKWE------LNPGDGAFYGP 542

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIG 536
           K +  +KDAIGR  QC TIQ+DF LP RFN  +V+    +K  PV+IHRA+ GS+ER I 
Sbjct: 543 KIDIQIKDAIGRYHQCATIQLDFQLPIRFNLTFVSHDGDDKKKPVIIHRAILGSVERMIA 602

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKI 595
           I+ EN+ G  P WLSP Q +V  +  +  EYAQ++     +    ++ D     T+N KI
Sbjct: 603 ILTENYGGKWPFWLSPRQVMVVPVGPTCDEYAQKVRQQFHNAKFMVDIDLDPGCTLNKKI 662

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           R   + +   I++ G+KE +  ++ IR   +    + ++ + I  L +
Sbjct: 663 RNAQLAQYNFILVVGEKEKTSGTVNIRTRDNKVHGERTISETIERLQQ 710


>gi|298373605|ref|ZP_06983594.1| threonine--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058]
 gi|298274657|gb|EFI16209.1| threonine--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058]
          Length = 650

 Score =  621 bits (1601), Expect = e-175,   Method: Composition-based stats.
 Identities = 258/653 (39%), Positives = 396/653 (60%), Gaps = 20/653 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M   +K+TFPD S++ +    T   +AESIS  LA + +  ++NG + DL+ P+  + +I
Sbjct: 1   MKYSMKITFPDNSVREYEKGTTAYQIAESISPRLAAEVLVASVNGNIYDLNRPIDEDSTI 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ--PFSSD 117
           ++   ++P +     H+ +H+MAEA+Q ++P V+  IGP IE+GFYYD +          
Sbjct: 61  KLHKWDEPEAKHAFWHTSSHLMAEALQELYPGVKFGIGPAIENGFYYDVELPAGVVIKEG 120

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +L ++EKKM E+ AR     +  +S   A E F S+ E  K E++  + A   +T Y QG
Sbjct: 121 DLEKVEKKMYELAARKETLRRSSISKADALEYFGSRGEHLKTELISEL-ADGTITTYTQG 179

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
            + DLCRGPH+ ST ++K   KL+ VAGAYWRG+  RP L+RIYG  +  +++L +YL  
Sbjct: 180 GFTDLCRGPHLTSTAEIK-AIKLLSVAGAYWRGNEKRPQLTRIYGITFPKKKQLEEYLTL 238

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEIN 295
           LEE++KRDHRK+ +E++LF  ++    G+  W  KG  +   L +++++ + +  Y+++ 
Sbjct: 239 LEEAKKRDHRKIGKELELFTFSDMVGKGLPLWLPKGTDLRLRLENFLKKLQKRYGYQQVI 298

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP +  + L+  SGHW  Y  + F       T ++   + LKPMNCP H  ++    KSY
Sbjct: 299 TPHIGAKQLYVTSGHWAKYGKDSFQ---PIQTPEEGEEYLLKPMNCPHHCEIYKSTPKSY 355

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           ++LP R+AEFG+VYR E SG LHGL RVR FTQDDAH+FC  +Q+  E +K+  +I+ I+
Sbjct: 356 KDLPFRVAEFGTVYRYEQSGELHGLTRVRSFTQDDAHLFCRPDQIKEEFIKVMEIILIIF 415

Query: 416 KDFGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
           K   F+    ++S R     EK +GSD  W+ AEN +      I+   +  +   V  GE
Sbjct: 416 KALRFDNFEAQISLRDKVDREKYIGSDENWEKAENAI------IEACRETGLKAVVEYGE 469

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
            AFYGPK ++++KDA+GR WQ GTIQVD+NLP RF   Y  + ++K  PVMIHRA FGS+
Sbjct: 470 AAFYGPKLDFMVKDALGRRWQLGTIQVDYNLPERFELEYTGADNQKHRPVMIHRAPFGSM 529

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           ERF+ ++IE+  G  PLWL+P QA+V  I+    EYAQ++A+ L    +    DFR+E I
Sbjct: 530 ERFVAVLIEHTAGKFPLWLTPEQAVVLPISEKFNEYAQQVASRLNILDVRAIGDFRDEKI 589

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
             KIR++ +K IP ++I G+ E    ++ +RR G     K+ + +   ++  E
Sbjct: 590 GRKIRDNELKHIPYLLIVGNDEMETNTVAVRRQGEGDKGKMKVDEFAKMINDE 642


>gi|70725135|ref|YP_252049.1| threonyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
 gi|68445859|dbj|BAE03443.1| threonyl-tRNA synthetase 2 (Threonine--tRNA ligase) [Staphylococcus
           haemolyticus JCSC1435]
          Length = 638

 Score =  621 bits (1601), Expect = e-175,   Method: Composition-based stats.
 Identities = 265/647 (40%), Positives = 416/647 (64%), Gaps = 20/647 (3%)

Query: 1   MPSD-IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGS 58
           M +  I + FPDGS K +      SDVA+SIS+SL K+AV   +N ++ DL+ P+  +  
Sbjct: 1   MSNQQINIQFPDGSNKAYQAGVLASDVAKSISQSLYKEAVVCRMNDRLVDLTHPLQEDCE 60

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           +   T +D   L V+RHS AH++A+A+  ++P+V++ IGP+IE GFYYD D ++  S  +
Sbjct: 61  LTFYTLKDQEGLNVMRHSAAHVLAQALTRLYPDVKLTIGPVIEHGFYYDIDLDESISEAD 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L +IEK+M++I + +  F +Q LS+ +A+ +F+     YK+E++E     + ++LY+QGE
Sbjct: 121 LNKIEKEMKKIHSENLKFERQNLSYAEAKNIFK--DNPYKLELIEEHK-DDQLSLYQQGE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + DLC GPHV ST  V  F KL KV+GAYWRG+S+  ML RIYG A+ ++ +L  Y  FL
Sbjct: 178 FIDLCVGPHVPSTKFVNHF-KLTKVSGAYWRGNSDNKMLQRIYGVAFRSKDQLDDYFEFL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTP 297
            E+E+R+HR+L +++ LF  +E+  G+ F+   G  I   + +++R  ++K DY+E+ TP
Sbjct: 237 REAEERNHRRLGKQLKLFMFSEEAPGMPFYLSNGQFIRNQMENFLREVQLKHDYDEVRTP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++++ LW++SGHWD Y  NM+  K       D   +ALKPMNCPGH+ +F + L+SY++
Sbjct: 297 LMMNKRLWEESGHWDHYHENMYFTKV------DENDYALKPMNCPGHMLIFKNELRSYKD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFG V+R+E SG+L+GL+RVR F QDDAH+F  K Q+ +E  +I  LI  IY  
Sbjct: 351 LPLRIAEFGQVHRHEFSGALNGLLRVRTFCQDDAHIFIMKSQIKSEVQEILKLIDYIYSV 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFE  + +LSTRP+  +G   LW++AE  +  VLD +       ++  +  G+GAFYGP
Sbjct: 411 FGFEYSI-ELSTRPDDYLGELDLWNEAEQSLAHVLDDLG------LDYSINEGDGAFYGP 463

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  +KDA+ R  QC T+Q+DF +P +F   Y+N  +EK  PV++HRAVFGS++RF GI
Sbjct: 464 KIDVHIKDALNRSHQCATVQLDFQMPEKFELTYINEQNEKERPVVLHRAVFGSLDRFFGI 523

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE+FKG  PLW++P+Q  +  ++ +   Y + +A  L+  ++ +  D R E +  KIRE
Sbjct: 524 LIEHFKGAFPLWMAPVQVNLIGVSDNNDGYVRTVAEALRDENIRVAIDDREEKLGKKIRE 583

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
             + KI   ++ GD E    ++ +R++     + + +   I  L  E
Sbjct: 584 SQLNKISYTLVLGDDEQQHHTVSVRKYAHDDNETMDIQAFIEKLKHE 630


>gi|294101704|ref|YP_003553562.1| threonyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
 gi|293616684|gb|ADE56838.1| threonyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
          Length = 633

 Score =  621 bits (1601), Expect = e-175,   Method: Composition-based stats.
 Identities = 270/617 (43%), Positives = 386/617 (62%), Gaps = 16/617 (2%)

Query: 33  SLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE 91
            + K AVA  ING+  DLS  + E G +E I       L +IRHS AH+MA+A QS++PE
Sbjct: 27  EMHKGAVAAKINGRYVDLSAEIAESGLLEAIDGASEEGLDIIRHSAAHLMAQAFQSLYPE 86

Query: 92  VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFE 151
               IGP I++GFYYD +  +  S + L +IEK+M+ +  R  P  +Q L  E+A   F+
Sbjct: 87  AHFGIGPSIKNGFYYDMELPESISEEALPKIEKEMKRLAKRAFPIERQILKKEEAIAFFK 146

Query: 152 SKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGD 211
            + E YKVE++E I     V+LYRQG++ DLCRGPHV +T  +K F KL+ VAGAYWRGD
Sbjct: 147 ERGEKYKVELIEEI-EDGTVSLYRQGDYVDLCRGPHVPNTSWIKHF-KLLSVAGAYWRGD 204

Query: 212 SNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRK 271
               ML+R+YGTA+  ++ L  Y+  LEE++ RDHRK+ +E+DLF I  +G G  F+H K
Sbjct: 205 EKNIMLTRVYGTAFADEESLQTYITRLEEAKNRDHRKIGKELDLFSIQPEGPGFPFFHPK 264

Query: 272 GWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G  I   L  + R+   K+ Y EI TP +LD+ LW +SGHWD YR NM+       T  D
Sbjct: 265 GMAILNKLTEFWRQVHEKNGYCEIRTPLILDRSLWIRSGHWDHYRDNMYF------TEID 318

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
              FA+KPMNCPG + ++   ++SYR+LP+R+AE G V+R+E SG LHGLMRVR FTQDD
Sbjct: 319 EMPFAIKPMNCPGGILIYKSQIRSYRDLPLRMAELGIVHRHERSGVLHGLMRVRCFTQDD 378

Query: 391 AHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKG 450
           AH++CT EQ+ +E   I  L   IY+D    K  ++LSTRPE  +GS+  W+ AE  +K 
Sbjct: 379 AHLYCTPEQVKDEIKGIMYLCQYIYRDIFGFKYTMELSTRPENSMGSEEQWNIAETALKE 438

Query: 451 VLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFY 510
            L+         +   V  G+GAFYGPK ++ L+D IGR WQCGTIQ+DF +P +F+  +
Sbjct: 439 ALEETN------MQYRVNPGDGAFYGPKIDFHLEDCIGRTWQCGTIQLDFQMPEKFDLTF 492

Query: 511 VNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQE 570
           V +  ++  PVM+HR + GS+ERF GI+IE F G  P WL+P+Q  +  I+   ++YA+ 
Sbjct: 493 VGADGKEHRPVMLHRTILGSLERFFGILIEQFAGAFPYWLAPVQVRLLPISEDFLDYARL 552

Query: 571 IANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
           +   L ++++ +E D R+E +  KIR+  I+KIP + + G+KE +   +  R        
Sbjct: 553 VQAKLVANNIRVEIDSRDEKLGKKIRDAQIQKIPYMAVIGEKEVASDQVAPRERSRGDLG 612

Query: 631 KVSLLDAIPILTKESLP 647
            +S+   I +L +E  P
Sbjct: 613 AMSINSFIDVLMEEKNP 629


>gi|300870146|ref|YP_003785017.1| threonyl-tRNA synthetase [Brachyspira pilosicoli 95/1000]
 gi|300687845|gb|ADK30516.1| threonyl-tRNA synthetase [Brachyspira pilosicoli 95/1000]
          Length = 643

 Score =  621 bits (1601), Expect = e-175,   Method: Composition-based stats.
 Identities = 277/638 (43%), Positives = 409/638 (64%), Gaps = 18/638 (2%)

Query: 12  GSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSD-PVREGSIEIITPEDPRSL 70
           G   +     +  D  +  ++  +K AVA   NG   DL+  P  +G +E+I       L
Sbjct: 8   GQSYDLSNGESLLDFLKQNAKKDSKDAVAAKFNGTQVDLTYTPETDGDLELILTTSDEGL 67

Query: 71  AVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEII 130
            ++RHS +H+MA+AV+ ++P  QV IGP I+DGFYYDFD E+PF+ ++L +IE +M++I+
Sbjct: 68  EILRHSTSHLMAQAVRRLYPNTQVTIGPAIKDGFYYDFDAEKPFTEEDLPKIEDEMKKIV 127

Query: 131 ARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRS 190
             + P +++ +  ++A E F+   E YKVEI+E I A   V+ Y QG++ DLCRGPHV S
Sbjct: 128 KENIPVVRKVMKKDEAIEYFKKANEPYKVEIIEGIDAD-TVSFYEQGDFIDLCRGPHVPS 186

Query: 191 TGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLA 250
           TG +K + KLM VAG+YWRGDSN  MLSRIYGTA+ +++ L +YL  L+E+++RDHRKL 
Sbjct: 187 TGYIKSY-KLMSVAGSYWRGDSNNKMLSRIYGTAFESKEALDKYLKKLKEAKERDHRKLG 245

Query: 251 REMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSG 309
           +E++LF   ++G G  FWH  G  I++ + SY+R +     Y EI TP +L++ LW +SG
Sbjct: 246 KELNLFSFHDEGPGFPFWHPNGMIIYKAVESYIRNENDKRGYVEIKTPAILNEELWHRSG 305

Query: 310 HWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVY 369
           HWD+Y+ NM+       T  D   +A+KPMNCPG + V+N  + SYR+LP+R+AE G V+
Sbjct: 306 HWDNYKENMYF------TEIDDTKYAVKPMNCPGGLIVYNSNIHSYRDLPLRVAELGFVH 359

Query: 370 RNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
           R+E SG+LHGL RVR FTQDDAH+FCT+EQ+ +E +      +S+YKDFGF+   + +ST
Sbjct: 360 RHELSGALHGLFRVRAFTQDDAHIFCTEEQLGDEIINTIEYYLSVYKDFGFKDFEIFVST 419

Query: 430 RPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGR 489
           RP K +GSD +W+ A   +   LD +       I+  V  G+GAFYGPK ++ +KD + R
Sbjct: 420 RPAKSIGSDEIWELATKSLMNALDKLG------ISYKVNEGDGAFYGPKIDFNIKDVLDR 473

Query: 490 DWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW 549
           +WQCGT+QVDF+LP RF   Y     +K  PVM+HRA+ GS+ERFIGI++E++ G  PLW
Sbjct: 474 NWQCGTLQVDFSLPMRFEISYEGKDGKKHTPVMLHRAILGSMERFIGILVEHYNGKFPLW 533

Query: 550 LSPIQAIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIII 607
           LSPIQ  V  +    + +    E+A  LK     +E D  N+ +  KI+++ +++ P  +
Sbjct: 534 LSPIQVAVVNVLNEEAQINRVHEVAKKLKEAGFRVEIDESNDNLGTKIKKYRLQRTPYTV 593

Query: 608 ICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           I G +E S   + IR   S   + + L + +  L KES
Sbjct: 594 IIGAEEVSNGKLSIRTRSSQEIKDMDLTEFMEKLQKES 631


>gi|146297790|ref|YP_001192381.1| threonyl-tRNA synthetase [Flavobacterium johnsoniae UW101]
 gi|189083608|sp|A5FP01|SYT_FLAJO RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|146152208|gb|ABQ03062.1| threonyl-tRNA synthetase [Flavobacterium johnsoniae UW101]
          Length = 648

 Score =  621 bits (1601), Expect = e-175,   Method: Composition-based stats.
 Identities = 257/651 (39%), Positives = 393/651 (60%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            IK+T PDGSI+ F    T  +VA++IS   A+  ++ + NG   +   P+  +G++ + 
Sbjct: 1   MIKITLPDGSIREFAQGVTPMEVAKNISEGFARNVISASFNGTTIETETPLTTDGNLILY 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQ 121
           T  D        HS +H+MA+A++ ++P +++ +GP I +GFYYD D E Q  S  +  +
Sbjct: 61  TWNDAEGKKAFWHSTSHVMAQALEELYPGIKLTLGPAIANGFYYDVDFEDQKISEADFKK 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE ++ EI      F  + ++  +A E+++     YK E++ ++     +T      + D
Sbjct: 121 IEDRILEIARGKFDFKMRPVTKAEALEMYK--DNVYKTELISNL-EDGTITFCDHATFTD 177

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG H+ +TG +K   K+M VAGAYWRGD     L+R+YGT++  Q++LT+YL  LEE+
Sbjct: 178 LCRGGHIPNTGIIK-AVKIMSVAGAYWRGDEKNKQLTRVYGTSFPKQKDLTEYLELLEEA 236

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           ++RDHRKL +E++LF  ++    G+  W  KG  +   L  +++R + K  YE++ +P +
Sbjct: 237 KRRDHRKLGKELELFAFSQKVGQGLPLWLPKGAALRDRLEQFLKRAQKKAGYEQVVSPHI 296

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             + L+  SGH+  Y A+ F       T  +   F LKPMNCP H  ++N    SY++LP
Sbjct: 297 GQKELYVTSGHYAKYGADSFQ---PIHTPAEGEEFLLKPMNCPHHCEIYNVRPWSYKDLP 353

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
            R AEFG+VYR E SG LHGL RVRGFTQDDAH+FCT EQ+  E  K+ +L++ ++   G
Sbjct: 354 KRYAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCTPEQLDEEFKKVIDLVLYVFGSLG 413

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           FE    ++S R ++     +G+D  W+ AEN +      I  +    +NT V  GE AFY
Sbjct: 414 FENFTAQISLRDQEDREKYIGTDENWEKAENAI------INAAKDKGLNTVVEYGEAAFY 467

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDA+GR WQ GTIQVD+NLP RF   Y  + +E   PVMIHRA FGS+ERFI
Sbjct: 468 GPKLDFMVKDALGRQWQLGTIQVDYNLPERFELTYKGADNELHRPVMIHRAPFGSMERFI 527

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            I++E+  GN PLWL P QAI+ +++     YA+++ +LL++H +    D RNETI  KI
Sbjct: 528 AILLEHTAGNFPLWLMPEQAIILSLSEKYENYAKKVLDLLENHEIRALIDNRNETIGKKI 587

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ--KVSLLDAIPILTKE 644
           R+  ++KIP ++I G++E    +I IRR G        VS+ +   I+ +E
Sbjct: 588 RDAEMQKIPFMLIVGEEEEKNGTISIRRHGQEGKGNITVSIEEFASIVDEE 638


>gi|94264275|ref|ZP_01288069.1| Threonyl-tRNA synthetase, class IIa [delta proteobacterium MLMS-1]
 gi|94270245|ref|ZP_01291687.1| Threonyl-tRNA synthetase, class IIa [delta proteobacterium MLMS-1]
 gi|93450880|gb|EAT01895.1| Threonyl-tRNA synthetase, class IIa [delta proteobacterium MLMS-1]
 gi|93455320|gb|EAT05527.1| Threonyl-tRNA synthetase, class IIa [delta proteobacterium MLMS-1]
          Length = 641

 Score =  621 bits (1600), Expect = e-175,   Method: Composition-based stats.
 Identities = 282/636 (44%), Positives = 402/636 (63%), Gaps = 18/636 (2%)

Query: 12  GSIKNFPVHATGSDVAESI-SRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRS 69
           G    F      ++V   + S    K+ +A+ +  ++ DL+ P+  G  I  +T  DP +
Sbjct: 10  GKTATFAAATPVAEVVRELLSNKERKRTLALRVGQQLYDLTAPLTCGGEIAPLTTADPGA 69

Query: 70  LAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQE 128
           L ++RHS AH+MAEAV  ++ PEVQV IGP   DGFYYDFD+ QPF+ D+L +IE +M E
Sbjct: 70  LELLRHSAAHVMAEAVLDLFGPEVQVTIGPATADGFYYDFDRRQPFTPDDLEKIEARMAE 129

Query: 129 IIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           I+A D PF ++ +S  +A + F ++ + YKVE+L  + A E V+LY QG + DLCRGPH+
Sbjct: 130 IVAADQPFERREMSLAQAIDFFTAQGQEYKVELLRELEA-EQVSLYSQGNFVDLCRGPHL 188

Query: 189 RSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRK 248
            STG +K F KL ++AGAYWRGD N  ML RIYGTA+  ++EL QYL  LEE+++RDHRK
Sbjct: 189 PSTGWLKAF-KLTRLAGAYWRGDENNKMLQRIYGTAFFDKKELKQYLAQLEEAKRRDHRK 247

Query: 249 LAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQ 306
           L +E++LF I  + G G+I W  KG  + + +  Y R+   +  Y+ + TP +  + LWQ
Sbjct: 248 LGKELELFTIQEQIGPGLILWQPKGALLRRLIEDYWRQQHYQHGYDLLYTPHIARRELWQ 307

Query: 307 QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFG 366
            SGH D Y  NMFA    +D       + LKPMNCP H+A++    +SYRE P+R  E G
Sbjct: 308 TSGHLDFYGDNMFAGMDIEDV-----QYQLKPMNCPFHIALYKTRKRSYREFPLRWCELG 362

Query: 367 SVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK 426
           +VYR E +G+LHGLMRVRGFTQDDAH+FC  EQ+ +E  +I +  + + K FGF    + 
Sbjct: 363 TVYRFEKTGALHGLMRVRGFTQDDAHIFCRPEQLEDEIYRILDFNLHVLKAFGFSDYEIY 422

Query: 427 LSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDA 486
           LSTRPEK VGSD  W  A   +K  L+         +   V  GEG FYGPK +  +KD 
Sbjct: 423 LSTRPEKYVGSDEHWQQATEALKLALEH------KGLAYSVDPGEGVFYGPKIDIKIKDV 476

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNL 546
           +GR WQC TIQVDFNLP RF   Y    S +  P+MIHRA+ GS+ERF G++IE++ G  
Sbjct: 477 LGRAWQCSTIQVDFNLPERFKLGYTGEDSGEHRPIMIHRALMGSLERFFGVLIEHYAGAF 536

Query: 547 PLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPII 606
           PLWL+P+QA +  IT + ++Y  ++   L+   + +E D RNE +NYKIRE  ++KIP +
Sbjct: 537 PLWLAPVQARILNITDAQLDYVGKVYEQLRRAGVRVEKDERNEKLNYKIREAQLQKIPYM 596

Query: 607 IICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           ++ GD+EA++ +I +R+        +++ D   ++ 
Sbjct: 597 LVVGDQEAADGTITVRQRDGKNLPAMTVADFAALVA 632


>gi|115475758|ref|NP_001061475.1| Os08g0295300 [Oryza sativa Japonica Group]
 gi|38175524|dbj|BAD01219.1| putative threonyl-tRNA synthetase [Oryza sativa Japonica Group]
 gi|38175707|dbj|BAD01414.1| putative threonyl-tRNA synthetase [Oryza sativa Japonica Group]
 gi|113623444|dbj|BAF23389.1| Os08g0295300 [Oryza sativa Japonica Group]
 gi|215687347|dbj|BAG91912.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 745

 Score =  621 bits (1600), Expect = e-175,   Method: Composition-based stats.
 Identities = 233/649 (35%), Positives = 371/649 (57%), Gaps = 24/649 (3%)

Query: 3   SDIKLTFPDGSIKNFPVH-ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIE 60
             I++T PDG++K+     +T  D+A+ IS  LA   +   +NG + D++ P+  +  ++
Sbjct: 109 EPIRITLPDGAVKDGKKWISTPMDIAKEISSGLANSCLIAQVNGTLWDMTRPLEGDCELK 168

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII--EDGFYYD-FDKEQPFSSD 117
           +   +         HS AHI+ E+++  +   ++ IGP     +GFYYD +  +   +  
Sbjct: 169 LFKFDSNEGRDTFWHSSAHILGESLERAY-GCKLCIGPCTTRGEGFYYDAYYNDLTLNET 227

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
               I+ + Q+ +A   PF +  +S  +A E+F   K  +KVEI+  +P  + +T+YR G
Sbjct: 228 HFGIIDAQAQKAVAEKQPFERIEVSRAEALEMFAENK--FKVEIINELPEDKTITVYRCG 285

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
              DLCRGPH+ +T  VK F   +K + +YWRG ++R  L R+YG ++   + L +Y + 
Sbjct: 286 PLVDLCRGPHIPNTSFVKAF-ACLKASSSYWRGKADRESLQRVYGISFPDSKRLKEYKHL 344

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINT 296
           LEE++KRDHR L +  DLF   +   G  F+   G  I+  L+ ++R++ +   Y+E+ +
Sbjct: 345 LEEAKKRDHRLLGQTQDLFFFHQLSPGSCFFLPHGAIIYNKLMDFLRQQYRDRGYQEVLS 404

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P + +  LW+ SGH  +Y+ NMF  +       + + F LKPMNCPGH  +F H ++SYR
Sbjct: 405 PNIYNMQLWETSGHAANYKENMFVFEI------EKQEFGLKPMNCPGHCLMFEHRVRSYR 458

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ELP+R+A+FG ++RNE SG+L GL RVR F QDDAH+FC + Q+ +E   + + I  +Y+
Sbjct: 459 ELPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCRESQIKDEVKAVLDFINYVYE 518

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
            FGF+  + +LSTRPEK +G    W+ AE  +   L+      Q      +  G+GAFYG
Sbjct: 519 IFGFKYEL-ELSTRPEKYLGDIETWNKAEQQLTEALNEFGKPWQ------INEGDGAFYG 571

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK-CHPVMIHRAVFGSIERFI 535
           PK +  + DA+ R +QC T+Q+DF LP RF   Y      K   PVMIHRA+ GS+ER  
Sbjct: 572 PKIDIGVFDALKRKFQCATLQLDFQLPLRFKLTYSAEDEAKLERPVMIHRAILGSVERMF 631

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            I++E++ G  PLWLSP QAIV +I+S++VEYA+++   +      +  D  + TI  K+
Sbjct: 632 AILLEHYNGKWPLWLSPRQAIVCSISSNSVEYAKQVRARIHEAGFHVAIDETDRTIQKKV 691

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           RE  + +   I++ G +EA    + +R         VS+ D I    +E
Sbjct: 692 REAQLAQFNYILVVGAQEAETGQVSVRVRDKAELATVSIDDIITRFKEE 740


>gi|33861154|ref|NP_892715.1| threonyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris
           str. CCMP1986]
 gi|73919818|sp|Q7V287|SYT_PROMP RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|33639886|emb|CAE19056.1| Threonyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris
           str. CCMP1986]
          Length = 638

 Score =  621 bits (1600), Expect = e-175,   Method: Composition-based stats.
 Identities = 293/645 (45%), Positives = 423/645 (65%), Gaps = 18/645 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP    +T PDGS K F    T  ++A+SI   LAK  +A  +N  + D + P+  +  +
Sbjct: 1   MPE---ITLPDGSKKVFEKPVTIQEIAQSIGSGLAKATIAGKVNDVLFDATLPIDNDSKV 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT  D   + +IRHS AH++  AV+ ++P +++AIGP+I++GFYYD   E  F+ ++L
Sbjct: 58  VIITSRDKDGIEIIRHSFAHLIGHAVKQLYPNIKMAIGPVIDNGFYYDIFSEYRFTPEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IE ++  +I ++       ++ ++A + F+ + E +K+ I+E IP +  + LY+  E+
Sbjct: 118 IKIENRINNLIKKNYDVEILQVTKKEAIKTFQERDETFKLRIIEEIPDEGLINLYKHEEY 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            D+CRGPHV +T  ++ F KL+K++G+YWRG+S    L RIYGTAW  ++EL  YL  +E
Sbjct: 178 IDMCRGPHVPNTCHLRHF-KLLKLSGSYWRGNSENESLQRIYGTAWAKEKELNDYLKRIE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+EKRDHRKL ++  LFHI E+  G+IFWH  GW I+Q L  Y+R  +  +DY EI TPQ
Sbjct: 237 EAEKRDHRKLGKKHSLFHIQEESPGMIFWHPNGWTIYQVLEKYVREILNKNDYLEIKTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
            +D+ LW++SGHWD +R +MF       T  + RT+A+KPMNCP H+ VFN GLKSY++L
Sbjct: 297 AVDKSLWEKSGHWDKFREDMFT------TASENRTYAIKPMNCPCHIQVFNQGLKSYKDL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFGS +RNEPSG+LHGLMRVR FTQDDAH+FCT+EQ+  E     +L+  +YK F
Sbjct: 351 PIRLAEFGSCHRNEPSGALHGLMRVRNFTQDDAHIFCTEEQIQAEVSTFIDLVFEVYKTF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF++I++KLSTRPEKRVGS+ +WD +E  +   LD         +   +  GEGAFYGPK
Sbjct: 411 GFDEIIIKLSTRPEKRVGSENIWDKSEEALMKALD------NKSLKWVLQPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD + R WQCGTIQVDF++P R +A Y++ ++EK +PVM+HRA+ GS ERFIGI+
Sbjct: 465 IEFSLKDCLDRVWQCGTIQVDFSMPIRLDATYIDLNNEKRNPVMLHRAILGSFERFIGIL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE ++   P+WL+P Q I+ +IT   +E   +   L+ S     + D RNE I YKIRE 
Sbjct: 525 IEQYEAKFPIWLAPYQIILLSITDRNIEKCLKFNQLINSKGYRSKVDIRNEKIGYKIREA 584

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +I +IP+I + GDKE    S+ +R           L D   ++  
Sbjct: 585 TIGRIPLIAVIGDKEEQFDSVALRALDGKNLGIFKLDDLYKLMNN 629


>gi|321475248|gb|EFX86211.1| hypothetical protein DAPPUDRAFT_127463 [Daphnia pulex]
          Length = 688

 Score =  620 bits (1599), Expect = e-175,   Method: Composition-based stats.
 Identities = 238/647 (36%), Positives = 360/647 (55%), Gaps = 22/647 (3%)

Query: 2   PSDIKLTFPDGSIKNF-PVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSI 59
           PS I++T PDG I        +  D+A  IS  LA+  V   +NGK+ DL  P+ +  ++
Sbjct: 46  PSPIQITLPDGKIVEGNSWRTSPFDIASGISAGLAENTVIAKVNGKLWDLDRPLEDSCTL 105

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDE 118
           +++  +D  +  V  HS AHI+ E+++  +    +  GP IE+GFYYD   ++Q  S+ +
Sbjct: 106 QLLKFDDEDAQKVFWHSTAHILGESMERCYGGC-LCYGPPIENGFYYDMFIQDQQVSNFD 164

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
              +E  M+  I    PF +  +  E   E+F+     +KV IL         T YR G 
Sbjct: 165 FPVLENVMKAAIKEKQPFERLEMKKEDLLEMFKY--NEFKVRILNEKVDTPTTTAYRCGP 222

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLC GPHVR TG++K F  + K +  YW G ++   L R+YG ++   ++L ++    
Sbjct: 223 LIDLCLGPHVRHTGKIKAFQ-ITKNSSTYWEGKADAESLQRVYGISFPDNKQLKEWQRIQ 281

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
           EE+ KRDHRKL RE +LF   E   G  F+   G  I+ TL+ ++R +  +  ++E+ TP
Sbjct: 282 EEAAKRDHRKLGREYELFFFHELSPGACFFTPHGAHIYNTLVEFLRNEYKQRGFQEVITP 341

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            V +  LW  SGHW  Y  NMF+ +       +  T+A+KPMNCPGH  +F+H ++S+RE
Sbjct: 342 NVYNSKLWLTSGHWQHYSENMFSFEV------EKETYAMKPMNCPGHCLLFDHRVRSWRE 395

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+RLA+FG ++RNE SG+L GL RVR F QDDAH+FCT  Q+ +E       +  +YK 
Sbjct: 396 LPLRLADFGVLHRNELSGALSGLTRVRRFQQDDAHIFCTMGQIKSEINGALAFLRDVYKI 455

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF   + +LSTRPEK +G    W+ AE  +   L+    +        +  G+GAFYGP
Sbjct: 456 FGFTFQL-RLSTRPEKFLGEIETWNHAEKELTESLNEFGETWL------LNPGDGAFYGP 508

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  + DA+ R  QC TIQ+DF LP RFN  ++N   EK  PV+IHRA+ GS+ER I I
Sbjct: 509 KIDITIMDALRRPHQCATIQLDFQLPIRFNLSFINEAGEKEKPVIIHRAILGSVERMIAI 568

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FRNETINYKIR 596
           + E++ G  P WLSP Q +V  +      YAQ++   + +    I  D    +T+N KIR
Sbjct: 569 LTESYAGKWPFWLSPRQCVVVPVGPVFDGYAQQVREQIAAAGFRITADIDAGDTMNKKIR 628

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              + +   I++ G+KE +  ++ IR   +    + ++   I   T+
Sbjct: 629 NGQLSQHNFILVVGEKEQTNGTVNIRTRDNKVHGEHTIAKVIERFTQ 675


>gi|91070150|gb|ABE11072.1| threonyl-tRNA synthetase [uncultured Prochlorococcus marinus clone
           HF10-11A3]
          Length = 638

 Score =  620 bits (1599), Expect = e-175,   Method: Composition-based stats.
 Identities = 292/639 (45%), Positives = 428/639 (66%), Gaps = 15/639 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS K F    T  ++A+SI   LAK  +A  +N  + D + P+ ++  + IIT +
Sbjct: 4   ITLPDGSKKVFEKSVTILEIAQSIGSGLAKATIAGRVNDVLLDATIPINKDSKVVIITSK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   + +IRHS AH++  AV+ I+ ++++AIGP+IEDGFYYD   E  F+ ++L +IE +
Sbjct: 64  DKEGIEIIRHSFAHLIGHAVKQIYSDIKMAIGPVIEDGFYYDIFSEYRFTPEDLIKIENR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           + ++I  +       +S E+A + F+ + E +K+ I+E IP +  + LY+  E+ D+CRG
Sbjct: 124 INKLIKTNYDVEILQVSKEEAIKTFKERDETFKLRIIEEIPEQGLINLYKHEEYIDMCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +T  ++ F KL+K++G+YWRG+S    L RIYGTAW  ++EL  YL  +EE+EKRD
Sbjct: 184 PHVPNTRHLRHF-KLLKLSGSYWRGNSENESLQRIYGTAWAKEKELKDYLTRIEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHL 304
           HRKL ++  LFHI E+  G+IFWH  GW I+Q L  Y+R  +K +DY EI TPQ +D+ L
Sbjct: 243 HRKLGKKHSLFHIQEESPGMIFWHPNGWTIYQVLEKYIRGILKKNDYLEIKTPQAVDKSL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHW+ +R +MF       T  + RT+A+KPMNCP H+ VFN GLKSY++LP+RLAE
Sbjct: 303 WEKSGHWEKFRDDMFT------TASENRTYAIKPMNCPCHIQVFNQGLKSYKDLPIRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNEPSG+LHGLMRVR FTQDDAH+FCT+EQ+  E     +L+  +YK FGF++I+
Sbjct: 357 FGSCHRNEPSGALHGLMRVRNFTQDDAHIFCTEEQIQEEVSTFIDLVFEVYKTFGFDEII 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +KLSTRP+KRVGS+ +WD +E  +   LD         +   +  GEGAFYGPK E+ LK
Sbjct: 417 IKLSTRPQKRVGSEEIWDKSEEALSKALD------NKNLKWELQPGEGAFYGPKIEFSLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D + R WQCGTIQVDF++P R +A YV+ ++EK +PVM+HRA+ GS ERFIGI+IE ++ 
Sbjct: 471 DCLNRVWQCGTIQVDFSMPIRLDATYVDINNEKRNPVMLHRAILGSFERFIGILIEQYEA 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P+W++P Q I+ +IT   ++   +   LL ++    + D RNE I YKIRE ++K++P
Sbjct: 531 KFPIWIAPYQIILLSITDRNIDKCLKFNELLNNNGYRSKVDIRNEKIGYKIREATLKRVP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +I + GDKE    SI +R          +L +   ++ +
Sbjct: 591 LIAVIGDKEEEIDSIALRALNGRNLGIFNLPNLYKLMDE 629


>gi|123968188|ref|YP_001009046.1| threonyl-tRNA synthetase [Prochlorococcus marinus str. AS9601]
 gi|166225480|sp|A2BQ78|SYT_PROMS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|123198298|gb|ABM69939.1| Threonyl-tRNA synthetase [Prochlorococcus marinus str. AS9601]
          Length = 638

 Score =  620 bits (1599), Expect = e-175,   Method: Composition-based stats.
 Identities = 291/639 (45%), Positives = 426/639 (66%), Gaps = 15/639 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS K F    T  ++A+SI   LAK  +A  +N  + D + P+ ++  + IIT +
Sbjct: 4   ITLPDGSKKVFEKSVTILEIAQSIGAGLAKATIAGKVNDVLLDATIPINKDSKVVIITSK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   + +IRHS AH++  AV+ I+ ++++AIGP+IEDGFYYD   E  F+ ++L +IE +
Sbjct: 64  DKEGIEIIRHSFAHLIGHAVKQIYSDIKMAIGPVIEDGFYYDIFSEYRFTPEDLIKIENR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           + ++I  +       +S E+A + F+ + E +K+ I+E IP +  + LY+  E+ D+CRG
Sbjct: 124 INQLIKTNYDVEILQVSKEEAIKTFKERDETFKLRIIEEIPEEGLINLYKHEEYIDMCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +T  ++ F KL+K++G+YWRG+S    L RIYGTAW  ++EL  YL  +EE+EKRD
Sbjct: 184 PHVPNTRHLRHF-KLLKLSGSYWRGNSENESLQRIYGTAWAKEKELKDYLTRIEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHL 304
           HRKL ++  LFHI E+  G+IFWH  GW I+Q L  Y+R  +K +DY EI TPQ +D+ L
Sbjct: 243 HRKLGKKHSLFHIQEESPGMIFWHPNGWTIYQVLEKYIREILKKNDYLEIKTPQAVDKSL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHW+ +R +MF       T  + RT+A+KPMNCP H+ +FN GLKSY++LP+RLAE
Sbjct: 303 WEKSGHWEKFRDDMFT------TASENRTYAIKPMNCPCHIQIFNQGLKSYKDLPIRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNEPSG+LHGLMRVR FTQDDAH+FCT+EQ+  E     +L+  +YK FGF++I+
Sbjct: 357 FGSCHRNEPSGALHGLMRVRNFTQDDAHIFCTEEQIQEEVSTFIDLVFEVYKTFGFDEII 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +KLSTRPEKRVGS+ +WD +E  +   LD         +   +  GEGAFYGPK E+ LK
Sbjct: 417 IKLSTRPEKRVGSEDIWDKSEEALTKALD------NKNLKWELQPGEGAFYGPKIEFSLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D + R WQCGTIQVDF++P R +A YV+  +EK +PVM+HRA+ GS ERFIGI+IE ++ 
Sbjct: 471 DCLNRVWQCGTIQVDFSMPIRLDATYVDIDNEKRNPVMLHRAILGSFERFIGILIEQYEA 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P+WL+P Q I+ +IT   +E   +   L+ ++    + D RNE I YKIRE ++ ++P
Sbjct: 531 KFPIWLAPYQIILLSITDRNIEKCLKFNELINNNGYRSKVDIRNEKIGYKIREATLGRVP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +I + GDKE    S+ +R          +L +   ++ +
Sbjct: 591 LIAVIGDKEEEIDSVALRALNGKNLGIFNLPNLFKLMDE 629


>gi|189055088|dbj|BAG38072.1| unnamed protein product [Homo sapiens]
          Length = 711

 Score =  620 bits (1598), Expect = e-175,   Method: Composition-based stats.
 Identities = 240/648 (37%), Positives = 358/648 (55%), Gaps = 23/648 (3%)

Query: 2   PSDIKLTFPDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
              IK+T PDG   +      T   +A  IS+ LA   V   +N  V DL  P+  + ++
Sbjct: 68  SKPIKVTLPDGKQVDAESWKTTPYQIACGISQGLADNTVIAKVNNVVWDLDRPLEEDCTL 127

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQP-FSSDE 118
           E++  ED  + AV  HS AHIM EA++ ++    +  GP IE+GFYYD   E+   SS++
Sbjct: 128 ELLKFEDEEAQAVYWHSSAHIMGEAMERVYGGC-LCYGPPIENGFYYDMYLEEGGVSSND 186

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
            + +E   ++II     F +  +  E    +F+     +K  IL         T+YR G 
Sbjct: 187 FSSLEALCKKIIKEKQAFERLEVKKETLLAMFKY--NKFKCRILNEKVNTPTTTVYRCGP 244

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLCRGPHVR TG++K   K+ K +  YW G ++   L RIYG ++   + L ++  F 
Sbjct: 245 LIDLCRGPHVRHTGKIK-ALKIHKNSSTYWEGKADMETLQRIYGISFPDPKMLKEWEKFQ 303

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
           EE++ RDHRK+ R+ +L+   E   G  F+  KG  I+  LI ++R + +   ++E+ TP
Sbjct: 304 EEAKNRDHRKIGRDQELYFFHELSPGSCFFLPKGAYIYNALIEFIRSEYRKRGFQEVVTP 363

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  LW  SGHW  Y  NMF+ +       +   FALKPMNCPGH  +F+H  +S+RE
Sbjct: 364 NIFNSRLWMTSGHWQHYSENMFSFEV------EKELFALKPMNCPGHCLMFDHRPRSWRE 417

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+RLA+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E     + + ++Y  
Sbjct: 418 LPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRAVYSV 477

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF   +  LSTRPEK +G   +WD AE  ++  L+      +      +  G+GAFYGP
Sbjct: 478 FGFSFKLN-LSTRPEKFLGDIEVWDQAEKQLENSLNEFGEKWE------LNSGDGAFYGP 530

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIG 536
           K +  +KDAIGR  QC TIQ+DF LP RFN  YV+    +K  PV++HRA+ GS+ER I 
Sbjct: 531 KIDIQIKDAIGRYHQCATIQLDFQLPIRFNLTYVSHDGDDKKRPVIVHRAILGSVERMIA 590

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKI 595
           I+ EN+ G  P WLSP Q +V  +  +  EYAQ++           + D     T+N KI
Sbjct: 591 ILTENYGGKWPFWLSPRQVMVVPVGPTCDEYAQKVRQQFHDAKFMADIDLDPGCTLNKKI 650

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           R   + +    ++ G+KE    ++ IR   +    + ++ + I  L +
Sbjct: 651 RNAQLAQYNFTLVVGEKEKISGTVNIRTRDNKVHGERTISETIERLQQ 698


>gi|281420278|ref|ZP_06251277.1| threonine--tRNA ligase [Prevotella copri DSM 18205]
 gi|281405773|gb|EFB36453.1| threonine--tRNA ligase [Prevotella copri DSM 18205]
          Length = 650

 Score =  620 bits (1598), Expect = e-175,   Method: Composition-based stats.
 Identities = 246/650 (37%), Positives = 392/650 (60%), Gaps = 19/650 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            +K+TFPDGS++ +    TG  +AESIS +LA+  V+  +NG+  +L+ P+  + ++E+ 
Sbjct: 1   MVKITFPDGSVREYEQGITGLQIAESISPALARNVVSCGVNGETVELNRPINEDANVELY 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD--FDKEQPFSSDELA 120
             ED +      H+ AH++AEA+Q ++P +Q   GP +E GF+YD    + Q  S ++ A
Sbjct: 61  KFEDEQGKHTFWHTSAHLLAEALQELYPGIQFGFGPAVESGFFYDVMPAEGQVISENDFA 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IE KM E+  ++ P +++ ++   A   F++  + YK E +E       +T Y QG + 
Sbjct: 121 KIEAKMMELAKKNEPVVRKEVAKADALAEFKADGQTYKCEHIEQDLEDGTITTYTQGNFT 180

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ +TG +K   K+  VAGA+WRGD+ R  ++RIYG ++  ++ L +YL  LEE
Sbjct: 181 DLCRGPHLMNTGLIK-AVKITSVAGAFWRGDAKREQMTRIYGISFPKKKMLDEYLVILEE 239

Query: 241 SEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++KRDHRK+ +EM+LF  +   G G+  W  KG ++   L   +R  +   +Y+E+  P 
Sbjct: 240 AKKRDHRKIGKEMELFMFSERVGKGLPIWLPKGTQLRLRLQELLRSLLKPYNYQEVICPG 299

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +  + L+  SGH+  Y  + F       T ++   + LKPMNCP H  V+    +SY++L
Sbjct: 300 IGGKSLYVTSGHYAHYGKDAFQ---PIQTPEEDEEYMLKPMNCPHHCEVYARKPRSYKDL 356

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG+V+R E SG LHGL RVR FTQDDAH+F   +Q+ +E   + ++I+ ++K F
Sbjct: 357 PLRIAEFGTVFRYEKSGELHGLTRVRTFTQDDAHIFVRSDQVKSEFENVIDVILKVFKIF 416

Query: 419 GFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           GFE    ++S    K     +GSD +W+++EN ++          +  + T   +GE AF
Sbjct: 417 GFENYEAQISLHDPKDTEKYIGSDEIWEESENAIREACK------EKGLETREEVGEAAF 470

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK ++++KDAIGR WQ GTIQVD+NLP RF   Y    + K  PVMIHRA FGS+ERF
Sbjct: 471 YGPKLDFMVKDAIGRRWQLGTIQVDYNLPERFKLEYTAEDNSKKTPVMIHRAPFGSLERF 530

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             ++IE+  G+ PLWL+P Q  +  I+    +YAQ++   L    +    D RNE I  K
Sbjct: 531 TAVLIEHTAGHFPLWLTPDQVAILPISEKFNDYAQKVRQYLDKQGVRALVDDRNEKIGRK 590

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IR++ +K++P ++I G+KE++E  + +R+ G      +S+ +    +  E
Sbjct: 591 IRDNELKRVPYMVIVGEKESAEGLVSMRKQGGGEQATMSMEEFAQRINAE 640


>gi|258644607|dbj|BAI39857.1| putative threonyl-tRNA synthetase [Oryza sativa Indica Group]
          Length = 749

 Score =  620 bits (1598), Expect = e-175,   Method: Composition-based stats.
 Identities = 233/649 (35%), Positives = 371/649 (57%), Gaps = 24/649 (3%)

Query: 3   SDIKLTFPDGSIKNFPVH-ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIE 60
             I++T PDG++K+     +T  D+A+ IS  LA   +   +NG + D++ P+  +  ++
Sbjct: 113 EPIRITLPDGAVKDGKKWISTPMDIAKEISSGLANSCLIAQVNGTLWDMTRPLEGDCELK 172

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII--EDGFYYD-FDKEQPFSSD 117
           +   +         HS AHI+ E+++  +   ++ IGP     +GFYYD +  +   +  
Sbjct: 173 LFKFDSNEGRDTFWHSSAHILGESLERAY-GCKLCIGPCTTRGEGFYYDAYYNDLTLNET 231

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
               I+ + Q+ +A   PF +  +S  +A E+F   K  +KVEI+  +P  + +T+YR G
Sbjct: 232 HFGIIDAQAQKAVAEKQPFERIEVSRAEALEMFAENK--FKVEIINELPEDKTITVYRCG 289

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
              DLCRGPH+ +T  VK F   +K + +YWRG ++R  L R+YG ++   + L +Y + 
Sbjct: 290 PLVDLCRGPHIPNTSFVKAF-ACLKASSSYWRGKADRESLQRVYGISFPDSKRLKEYKHL 348

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINT 296
           LEE++KRDHR L +  DLF   +   G  F+   G  I+  L+ ++R++ +   Y+E+ +
Sbjct: 349 LEEAKKRDHRLLGQTQDLFFFHQLSPGSCFFLPHGAIIYNKLMDFLRQQYRDRGYQEVLS 408

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P + +  LW+ SGH  +Y+ NMF  +       + + F LKPMNCPGH  +F H ++SYR
Sbjct: 409 PNIYNMQLWETSGHAANYKENMFVFEI------EKQEFGLKPMNCPGHCLMFEHRVRSYR 462

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ELP+R+A+FG ++RNE SG+L GL RVR F QDDAH+FC + Q+ +E   + + I  +Y+
Sbjct: 463 ELPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCRESQIKDEVKAVLDFINYVYE 522

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
            FGF+  + +LSTRPEK +G    W+ AE  +   L+      Q      +  G+GAFYG
Sbjct: 523 IFGFKYEL-ELSTRPEKYLGDIETWNKAEQQLTEALNEFGKPWQ------INEGDGAFYG 575

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK-CHPVMIHRAVFGSIERFI 535
           PK +  + DA+ R +QC T+Q+DF LP RF   Y      K   PVMIHRA+ GS+ER  
Sbjct: 576 PKIDIGVFDALKRKFQCATLQLDFQLPLRFKLTYSAEDEAKLERPVMIHRAILGSVERMF 635

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            I++E++ G  PLWLSP QAIV +I+S++VEYA+++   +      +  D  + TI  K+
Sbjct: 636 AILLEHYNGKWPLWLSPRQAIVCSISSNSVEYAKQVRARIHEAGFHVAIDETDRTIQKKV 695

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           RE  + +   I++ G +EA    + +R         VS+ D I    +E
Sbjct: 696 REAQLAQFNYILVVGAQEAETGQVSVRVRDKAELATVSIDDIITRFKEE 744


>gi|299144001|ref|ZP_07037081.1| threonine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str.
           F0131]
 gi|298518486|gb|EFI42225.1| threonine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str.
           F0131]
          Length = 639

 Score =  619 bits (1597), Expect = e-175,   Method: Composition-based stats.
 Identities = 263/646 (40%), Positives = 400/646 (61%), Gaps = 17/646 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           M   + +  PDGS K +    T  ++   IS  LA+ AV   +NG+   + D V  +   
Sbjct: 1   MEVKMIVKLPDGSEKVYECSKTVKEITMDISEGLARVAVGAVVNGETLGMKDLVSCDCDF 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            ++  +D     +  H+ +H+MA A+++++   + AIGP I +GFYYD D E  F+ ++L
Sbjct: 61  RVLKFDDKEGKQIFWHTTSHVMAYAIKNLFSGSKFAIGPSIANGFYYDIDVEHRFAPEDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IE +M++II  +    K  L   +A +LF+  ++ YK+E++E I   EN+++Y+ G++
Sbjct: 121 EKIESEMKKIIKSEYEVEKLSLPRAEAIKLFKDLEQNYKLELIEGI-EDENISIYKIGDY 179

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           +DLC+GPH+ +   +K F KL+ +AGAYW+GD N  ML RIYG ++  +++L +Y+  +E
Sbjct: 180 YDLCKGPHLENVKAIKAF-KLLSIAGAYWKGDENNKMLQRIYGISFEKKKQLDEYIERIE 238

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+EKRDHRKL RE+DLF + ++G G  F+H  G  +   L+ + R  + +  Y EI TP 
Sbjct: 239 EAEKRDHRKLGRELDLFTMHDEGPGFPFFHPNGMILRNELLGWWRNVLIENGYGEIQTPI 298

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L++ LW +SGHWD Y+ NM+  K       D   +A+KPMNCPG   V++    SYREL
Sbjct: 299 ILNEALWHRSGHWDHYKENMYFTKI------DGEDYAVKPMNCPGSTIVYSTNPHSYREL 352

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RL+EFG V+R+E SG+LHGL RVR FTQDDAHV+C   Q+  E  K+ +L   +Y  F
Sbjct: 353 PIRLSEFGQVHRHELSGALHGLFRVRTFTQDDAHVYCLPSQIEEEVFKMIDLADYLYSTF 412

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+   V+LSTRPE  +G    W+ AE  +K  L+      +  I   +  G+GAFYGPK
Sbjct: 413 GFKYS-VELSTRPEDFMGDIETWNKAEESLKVALE------KKNIKYSINEGDGAFYGPK 465

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++ L+DAIGR WQCGTIQ+DF +P  F+  Y+N   EK  PVM+HRA+ GS+ERF+GI+
Sbjct: 466 IDFHLEDAIGRTWQCGTIQLDFQMPVNFDLTYINEKGEKARPVMLHRALLGSVERFMGIL 525

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+F G  PLWLSPIQ  +  ++    E+A+E+   LK+  L +  D R E + YKIRE 
Sbjct: 526 IEHFAGKFPLWLSPIQVEIIPVSEKFAEFAKELEIKLKNTGLKVYLDERAEKVGYKIREA 585

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            +KKI  +++ G++E +   + +R+      +   + + I IL  E
Sbjct: 586 QLKKINYMLVVGEQEVNSGKLSVRKRNGEEIKDCEVEEFINILKSE 631


>gi|288574759|ref|ZP_06393116.1| threonyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM
           11002]
 gi|288570500|gb|EFC92057.1| threonyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM
           11002]
          Length = 630

 Score =  619 bits (1597), Expect = e-175,   Method: Composition-based stats.
 Identities = 270/635 (42%), Positives = 404/635 (63%), Gaps = 19/635 (2%)

Query: 10  PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPR 68
           P G +        G D+ +     L K A+A  +NG+  DL   V  + S+E IT +   
Sbjct: 7   PAGQLLESEKAVVG-DILKEWK--LDKGALAAKVNGEELDLDVEVSCDASVEPITSDTEE 63

Query: 69  SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQE 128
            L ++RHS AH++A+A   ++P   VAIGP+I+DGFYYD + ++P S  +L  +EK+M+ 
Sbjct: 64  GLEILRHSTAHLLAQAATRLFPGAVVAIGPVIKDGFYYDIEFKEPISEADLPALEKEMRR 123

Query: 129 IIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           I+ R  P  +Q +S E+A ELF+ +K+ YKVEILE I   ++V LY Q E+ DLCRGPHV
Sbjct: 124 IVKRGIPLKRQRVSREEAIELFKERKDLYKVEILEGI-DDDSVNLYWQDEYVDLCRGPHV 182

Query: 189 RSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRK 248
            +T  ++ F KL+ VAGAYWRGD N  ML+RIYGTA+ T+++L  Y+  +EE++KRDHRK
Sbjct: 183 PNTRVLQNF-KLLSVAGAYWRGDENNIMLTRIYGTAFATKEDLEAYVTRMEEAKKRDHRK 241

Query: 249 LAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQ 307
           + RE+ LF + ++G G  F+H KG  +  TLI +  +   K+ Y++I TP +L++ LW Q
Sbjct: 242 IGRELGLFSLHKEGPGFPFFHPKGMVVINTLIDFWSKVHRKNGYDQIRTPMILNRDLWIQ 301

Query: 308 SGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGS 367
           SGHWD YR NM+  +       D + +A+KPMNCPG + V+   L SYR+LP+RL E G 
Sbjct: 302 SGHWDHYRENMYFTEI------DDQPYAIKPMNCPGGILVYKSDLHSYRDLPLRLGELGI 355

Query: 368 VYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKL 427
           V+R+E SG LHGLMRVR FTQDDAH +CT +Q+ +E   I +++  IY +    K  V+L
Sbjct: 356 VHRHEKSGVLHGLMRVRCFTQDDAHHYCTPDQIKDEVSLIMDMVDYIYSEVFGFKFHVEL 415

Query: 428 STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAI 487
           STRP+  +GSD +W+ AE  ++ VL+    +        +  G+GAFYGPK ++ L+D I
Sbjct: 416 STRPDNSMGSDEMWELAEKSLREVLEERGTT------YVLNPGDGAFYGPKIDFHLEDCI 469

Query: 488 GRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           GR WQCGTIQ+DF +P +F+  Y+ S  ++  P M+HR + GSIERF+GI+IE++ G  P
Sbjct: 470 GRTWQCGTIQLDFQMPEKFDVTYIGSDGKEHRPAMLHRTILGSIERFLGILIEHYAGAFP 529

Query: 548 LWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIII 607
            W++P+Q  V  +    V+YA+++  LL+     +E D R+E +  KIR+  ++K+P ++
Sbjct: 530 FWIAPVQVKVLAVGDDHVDYAKDLKALLQDREYRVELDCRDEKLGRKIRDAQMEKVPFML 589

Query: 608 ICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           + GDKE    ++ +R         +S  D + +L 
Sbjct: 590 VVGDKELETGTVSVRDRSEGDKGSMSKEDLLELLK 624


>gi|189499158|ref|YP_001958628.1| threonyl-tRNA synthetase [Chlorobium phaeobacteroides BS1]
 gi|238692225|sp|B3EKG9|SYT_CHLPB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|189494599|gb|ACE03147.1| threonyl-tRNA synthetase [Chlorobium phaeobacteroides BS1]
          Length = 659

 Score =  619 bits (1597), Expect = e-175,   Method: Composition-based stats.
 Identities = 257/661 (38%), Positives = 405/661 (61%), Gaps = 24/661 (3%)

Query: 1   MPSDI------KLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV 54
           M  +I       +TFPDG   + P  ++G D+A+SI  SLA++A+A+ ING++ DL   V
Sbjct: 1   MSENIDVQATVTVTFPDGRNMSIPSGSSGYDIAQSIGHSLAREALAIRINGELADLGTAV 60

Query: 55  REG-SIEIITPEDPR--SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE 111
            +  ++EIIT + P      +  HS +HIMA+A++ ++P  +   GP +E GFYYD   E
Sbjct: 61  TDDATVEIITFDHPGATGKHIFWHSASHIMAQAIEELFPGTKFGAGPAVEQGFYYDIASE 120

Query: 112 QPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELF-ESKKEAYKVEILES-IPAKE 169
             F+ ++L +IE++M +I  R     ++ +  EKA   F ES+K+ YKVEIL+  +   +
Sbjct: 121 HRFNEEDLQKIEQQMLDISKRSIDIRREEMPREKAIAFFSESRKDPYKVEILQDTLKEAD 180

Query: 170 NVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQ 229
           +V++Y QG + DLC GPH+ +T ++K   KL  ++ ++WRGDS+R  + RIYG A+ + +
Sbjct: 181 SVSIYHQGAFADLCSGPHLPNTSKLK-AVKLTNISASFWRGDSSRESMQRIYGIAFPSAK 239

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIK 288
            L Q+L  LEE++KRDHRKL  E++LF +++D GSG+  W  KG  I   L ++++ + +
Sbjct: 240 LLKQHLARLEEAKKRDHRKLGAELELFMLSQDVGSGLPIWLPKGAIIRSELEAFLKEEQR 299

Query: 289 -DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
              Y  + TP + +  L+++SGH+  Y  + F      D +     + LKPMNCP H  +
Sbjct: 300 KRGYVPVYTPHIGNIDLYKRSGHYPYYSDSQFPPLTYKDDLGREEQYLLKPMNCPHHHLI 359

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
           ++  L+SYR+LP+R+AEFG+VYR+E SG L+GL+R RGFTQDD+H++C  +Q+ +E    
Sbjct: 360 YSSQLRSYRDLPIRMAEFGTVYRHEQSGELNGLIRARGFTQDDSHIYCRPDQLVDEICAA 419

Query: 408 HNLIISIYKDFGFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            +L   ++   GF+ I V+LS    +      G++ +W  AE  ++   D ++      I
Sbjct: 420 IDLTKFVFTTLGFDDIEVRLSLHDPENQGKYGGTEEVWKQAEKDVREAADRME------I 473

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
           N  + +GE +FYGPK ++I++DA+GR WQ GT+QVD+ +P RF+  Y+ S  +   PV+I
Sbjct: 474 NYVIGIGEASFYGPKIDFIVRDALGRKWQLGTVQVDYVMPERFDLSYIGSDGKPHRPVII 533

Query: 524 HRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIE 583
           HRA FGS+ERFIG++IE+  GN PLWL+P+Q  V  IT     YA+ +  +L  + +  +
Sbjct: 534 HRAPFGSMERFIGVLIEHTAGNFPLWLAPVQVAVLPITEEVHAYAERVHQMLIDNGIRAD 593

Query: 584 TDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            D R+E I  KIRE  + KIP ++I G KEA    I +RR        ++L     +L K
Sbjct: 594 LDIRSEKIGKKIREAEVGKIPYMVIIGQKEADSEEISLRRHRKGDQGSLTLQALKDMLVK 653

Query: 644 E 644
           E
Sbjct: 654 E 654


>gi|225424719|ref|XP_002265302.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|296086530|emb|CBI32119.3| unnamed protein product [Vitis vinifera]
          Length = 686

 Score =  619 bits (1597), Expect = e-175,   Method: Composition-based stats.
 Identities = 229/649 (35%), Positives = 364/649 (56%), Gaps = 24/649 (3%)

Query: 3   SDIKLTFPDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIE 60
             IK+T PDG++K       T  D+A  IS+ LA  A+   +NG + D+S P+  +  ++
Sbjct: 50  DPIKITLPDGTVKEGKKWATTPLDIAREISKGLASNALISLVNGILWDMSRPLEGDCELK 109

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII--EDGFYYD-FDKEQPFSSD 117
           + T +         HS AHI+ +A++  +   ++ IGP     +GFYYD F  E   + D
Sbjct: 110 LFTFDSDEGRDTFWHSSAHILGQALEVAY-GCKLCIGPCTTRGEGFYYDAFYGELGLNED 168

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
              +IE    + +    PF +  +S  +A ELF     ++K+EI+  +P  + +T+YR G
Sbjct: 169 HFKEIESGALKAVGEKQPFERIEVSRNQALELFSE--NSFKIEIINDLPEDKTITVYRCG 226

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
              DLCRGPH+ +T  VK F   +K + AYWRG+ +R  L R+YG ++   + L +Y+  
Sbjct: 227 PLVDLCRGPHIPNTSFVKAF-ACLKASSAYWRGNKDRESLQRVYGISYPDSKRLKEYIAR 285

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
           +EE++K DHR L  + +LF       G  F+   G +I+  L+ +++ + ++  Y E+ +
Sbjct: 286 IEEAKKYDHRLLGVKQELFFCHPLSPGSWFFLPHGGRIYNKLMEFIKAQYRERGYHEVFS 345

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P + +  LW+ SGH  +Y+ NMF  +       + + F LKPMNCPGH  +F H ++SYR
Sbjct: 346 PTMYNMQLWETSGHAANYKENMFVFEV------EKQEFGLKPMNCPGHCLMFEHRVRSYR 399

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ELP+RLA+FG ++RNE SG+L GL RVR F QDDAH+FC + Q+ +E + +   I   Y 
Sbjct: 400 ELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVMGVLEFINYAYN 459

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
            FGF   + KLSTRPEK +G    W+ AE  +   LD      +      +  G+GAFYG
Sbjct: 460 IFGFTYEL-KLSTRPEKYLGDLETWEKAEAALTEALDQSGKPWE------INEGDGAFYG 512

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFI 535
           PK +  + DA+ R +QC T+Q+DF LPSRF+  Y      ++  PVMIHRA+ GS+ER  
Sbjct: 513 PKIDISVSDALSRKFQCATLQLDFQLPSRFDLSYSAEDEAKRERPVMIHRAILGSVERMF 572

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            I++E++KG  P WLSP QAIV  ++  +  YA ++ + +      ++ D  +  I  K+
Sbjct: 573 AILLEHYKGKWPFWLSPRQAIVCPVSEKSQPYALKVRDQIHQAGYYVDVDTTDRKIQKKV 632

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           RE  + +   I++ G++EA+   + +R         +S+ + +     E
Sbjct: 633 REAQLAQYNYILVVGEEEANTGQVSVRVRDKGDHSVMSMENLLSFFKSE 681


>gi|296127837|ref|YP_003635089.1| threonyl-tRNA synthetase [Brachyspira murdochii DSM 12563]
 gi|296019653|gb|ADG72890.1| threonyl-tRNA synthetase [Brachyspira murdochii DSM 12563]
          Length = 643

 Score =  619 bits (1596), Expect = e-175,   Method: Composition-based stats.
 Identities = 282/638 (44%), Positives = 408/638 (63%), Gaps = 18/638 (2%)

Query: 12  GSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSD-PVREGSIEIITPEDPRSL 70
           G         +  D  +  ++  +K AVA   NG   DL+  P  +G +E+I       L
Sbjct: 8   GQSYELSDGESLLDFLKQNAKKDSKDAVAAKFNGTEVDLTYTPETDGDLELILTTTNEGL 67

Query: 71  AVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEII 130
            V+RHS +H+MA+AV+ ++P  QV IGP I+DGFYYDFD E+PF+ ++L +IE +M++II
Sbjct: 68  EVLRHSTSHLMAQAVRRLYPNTQVTIGPAIKDGFYYDFDAEKPFTEEDLPKIEDEMKKII 127

Query: 131 ARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRS 190
             + P +++ ++  +A E F+   E YKVEI+E I A   V+ Y QG++ DLCRGPHV S
Sbjct: 128 KENIPVVRKVMNKNEAIEYFKKANEPYKVEIIEGIDAD-TVSFYEQGDFIDLCRGPHVPS 186

Query: 191 TGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLA 250
           TG +K + KLM VAG+YWRGDSN  MLSRIYGTA+ +++ L +YL  L+E+++RDHRKL 
Sbjct: 187 TGYIKSY-KLMSVAGSYWRGDSNNKMLSRIYGTAFESKEALDKYLKRLKEAKERDHRKLG 245

Query: 251 REMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSG 309
           +E++LF   E+G G  FWH +G  I++ + SY+R +     Y EI TP +L++ LW +SG
Sbjct: 246 KELNLFSFHEEGPGFPFWHPRGMVIYKAVESYIRNENDKRGYVEIKTPAILNEELWHRSG 305

Query: 310 HWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVY 369
           HWD+Y+ NM+       T  D   +A+KPMNCPG + V+N  + SYR+LP+R+AE G V+
Sbjct: 306 HWDNYKENMYF------TEIDETKYAVKPMNCPGGLIVYNSNIHSYRDLPLRVAELGFVH 359

Query: 370 RNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
           R+E SG+LHGL RVR FTQDDAH+FCT+EQ+ +E +      +S+YKDFGFE   + +ST
Sbjct: 360 RHELSGALHGLFRVRAFTQDDAHIFCTEEQLGDEIINTIEYYLSVYKDFGFENFEIFVST 419

Query: 430 RPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGR 489
           RP K +GSD +W+ A   +   LD +       I   +  G+GAFYGPK ++ +KD + R
Sbjct: 420 RPAKSIGSDEIWELATKSLINALDKLG------IKYKINEGDGAFYGPKIDFNIKDVLDR 473

Query: 490 DWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW 549
           +WQCGT+QVDF+LP RF   Y      K  PVM+HRA+ GS+ERFIGI++E++ G  PLW
Sbjct: 474 NWQCGTLQVDFSLPMRFEISYEGKDGRKHTPVMLHRAILGSMERFIGILVEHYNGKFPLW 533

Query: 550 LSPIQAIVTTITSS--AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIII 607
           LSP+Q  V  +      ++   E+A  LK     +ETD  NE +  KI+++ +++ P  +
Sbjct: 534 LSPLQVAVVNVLDEKSQIDRVNEVAKALKDAGFRVETDEGNENLGTKIKKYRLQRTPYTV 593

Query: 608 ICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           I G +E S   + IR   S   + + L + I  L KES
Sbjct: 594 IIGAEEVSNGKLSIRTRSSQEIKDMDLNEFIEKLKKES 631


>gi|332251674|ref|XP_003274971.1| PREDICTED: threonyl-tRNA synthetase, cytoplasmic isoform 1
           [Nomascus leucogenys]
          Length = 723

 Score =  619 bits (1596), Expect = e-175,   Method: Composition-based stats.
 Identities = 242/648 (37%), Positives = 358/648 (55%), Gaps = 23/648 (3%)

Query: 2   PSDIKLTFPDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
              IK+T PDG   +      T   +A  IS+ LA   V   +N  V DL  P+ E S +
Sbjct: 80  SKPIKVTLPDGKQVDAESWKTTPYLIACGISQGLADNTVIAKVNNVVWDLDRPLEEDSTL 139

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQP-FSSDE 118
           E++  ED  + AV  HS AHIM EA++ ++    +  GP IE+GFYYD   E+   SS++
Sbjct: 140 ELLKFEDEEAQAVYWHSSAHIMGEAMERVYGGC-LCYGPPIENGFYYDMYLEEGGVSSND 198

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
            + +E   ++II     F +  +  E    +F+     +K  IL         T+YR G 
Sbjct: 199 FSSLEALCKKIIKEKQAFERLEVKKETLLAMFKY--NKFKCRILNEKVNTPTTTVYRCGP 256

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLCRGPHVR TG++K   K+ K +  YW G ++   L RIYG ++   + L ++    
Sbjct: 257 LIDLCRGPHVRHTGKIK-ALKIHKNSSTYWEGKADMETLQRIYGISFPDPKMLKEWEKLQ 315

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
           EE++ RDHRK+ R+ +L+   E   G  F+  KG  I+  LI ++R + +   ++E+ TP
Sbjct: 316 EEAKNRDHRKIGRDQELYFFHELSPGSCFFLPKGAYIYNALIEFIRSEYRKRGFQEVVTP 375

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  LW  SGHW  Y  NMF+ +       +   FALKPMNCPGH  +F+H  +S+RE
Sbjct: 376 NIFNSRLWMTSGHWQHYSDNMFSFEV------EKELFALKPMNCPGHCLMFDHRPRSWRE 429

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+RLA+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E     + + ++Y  
Sbjct: 430 LPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSI 489

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF   +  LSTRPEK +G   +WD AE  ++  L+      +      +  G+GAFYGP
Sbjct: 490 FGFSFKLN-LSTRPEKFLGDIEVWDQAEKQLENSLNEFGEKWE------LNSGDGAFYGP 542

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIG 536
           K +  +KDAIGR  QC TIQ+DF LP RFN  YV+    +K  PV++HRA+ GS+ER I 
Sbjct: 543 KIDIQIKDAIGRYHQCATIQLDFQLPIRFNLTYVSHDGDDKKRPVIVHRAILGSVERMIA 602

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKI 595
           I+ EN+ G  P WLSP Q +V  +  +  EYAQ++           + D     T+N KI
Sbjct: 603 ILTENYGGKWPFWLSPRQVMVVPVGPTCDEYAQKVRQQFHDAKFMADIDLDPGCTLNKKI 662

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           R   + +   I++ G+KE    ++ IR   +    + ++ + I  L +
Sbjct: 663 RNAQLAQYNFILVVGEKEKISGTVNIRTRDNKVHGERTISETIERLQQ 710


>gi|149409915|ref|XP_001508543.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus]
          Length = 719

 Score =  619 bits (1596), Expect = e-175,   Method: Composition-based stats.
 Identities = 242/647 (37%), Positives = 361/647 (55%), Gaps = 23/647 (3%)

Query: 3   SDIKLTFPDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIE 60
             IK+T PDG   +      T   +A  IS+ LA   V   +N  V DL  P+  + S+E
Sbjct: 77  KPIKVTLPDGKQVDAESWKTTPYQIACGISQGLADNTVIAKVNKVVWDLDRPLEGDCSLE 136

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQP-FSSDEL 119
           ++  +D  + AV  HS AHIM EA++ ++    +  GP IE+GFYYD   E    SS++ 
Sbjct: 137 LLKFDDEEAQAVYWHSSAHIMGEAMERVYGGC-LCYGPPIENGFYYDMYLENGGVSSNDF 195

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A +E   ++I+     F +  +  E   E+F+     +K  IL         T+YR G  
Sbjct: 196 AVLESLCKKIMKEKQLFERLEVKKETLLEMFKY--NKFKCRILNEKVNTPTTTVYRCGPL 253

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHVR TG++K   K+ K +  YW G ++   L R+YG ++   + L ++  F E
Sbjct: 254 IDLCRGPHVRHTGKIKTL-KIHKNSSTYWEGKADMETLQRVYGISFPDPKLLKEWEKFQE 312

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E++ RDHRK+ R+ +L+   E   G  F+  KG  I+ TLI ++R + +   ++E+ TP 
Sbjct: 313 EAKNRDHRKIGRDQELYFFHELSPGSCFFLPKGAYIYNTLIEFIRSEYRKRGFQEVVTPN 372

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           + +  LW  SGHW  Y  NMF+ +       +   FALKPMNCPGH  +F+H  +S+REL
Sbjct: 373 IYNSKLWLTSGHWQHYSENMFSFEV------EKEIFALKPMNCPGHCLMFDHRPRSWREL 426

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLA+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+  E     + + ++Y  F
Sbjct: 427 PLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEEEIKSCLDFLKTVYDVF 486

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF   +  LSTRPEK +G   +W+ AE  ++  L       +      +  G+GAFYGPK
Sbjct: 487 GFSFKLN-LSTRPEKFLGDIEVWNQAEKQLENSLIEFGEKWE------LNPGDGAFYGPK 539

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIGI 537
            +  +KDAIGR  QC TIQ+DF LP RFN  +V+    +K  PV++HRA+ GS+ER I I
Sbjct: 540 IDIQIKDAIGRYHQCATIQLDFQLPIRFNLTFVSHDGDDKKRPVIVHRAILGSVERMIAI 599

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIR 596
           + ENF G  PLWLSP Q +V  +  +  +YAQ++        L  + D     T+N KIR
Sbjct: 600 LTENFGGKWPLWLSPRQVMVVPVGPTCDDYAQKVRQQFHDAQLMTDVDLDPGCTLNKKIR 659

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              + +   I++ G+KE +  ++ IR   +    + ++ + I  L +
Sbjct: 660 NAQLAQYNFILVVGEKEKTSGTVNIRTRDNKVHGERTISETIERLQQ 706


>gi|126695961|ref|YP_001090847.1| threonyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
 gi|166225476|sp|A3PBX1|SYT_PROM0 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|126543004|gb|ABO17246.1| Threonyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
          Length = 638

 Score =  619 bits (1596), Expect = e-175,   Method: Composition-based stats.
 Identities = 292/639 (45%), Positives = 426/639 (66%), Gaps = 15/639 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS K F    T  ++A+SI   LAK  +A  +N  + D + P+ ++  + IIT +
Sbjct: 4   ITLPDGSKKVFEKSVTILEIAQSIGAGLAKATIAGRVNDVLLDATIPINKDSKVVIITSK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   + +IRHS AH++  AV+ I+ ++++AIGP+IEDGFYYD   E  F+ ++L +IE +
Sbjct: 64  DKEGIEIIRHSFAHLIGHAVKQIYSDIKMAIGPVIEDGFYYDIFSEYRFTPEDLIKIENR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           + ++I  +       +S E+A + F+ + E +K+ I+E IP +  + LY+  E+ D+CRG
Sbjct: 124 INKLIKTNYDVEILQVSKEEAIKTFKERDETFKLRIIEEIPEEGLINLYKHEEYIDMCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +T  ++ F KL+K++G+YWRG+S    L RIYGTAW  ++EL  YL  +EE+EKRD
Sbjct: 184 PHVPNTRHLRHF-KLLKLSGSYWRGNSENESLQRIYGTAWAKEKELKDYLTRIEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHL 304
           HRKL ++  LFHI E+  G+IFWH  GW I+Q L  Y+R  +K +DY EI TPQ +D+ L
Sbjct: 243 HRKLGKKHSLFHIQEESPGMIFWHPNGWTIYQVLEKYIREILKKNDYLEIKTPQAVDKSL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHW+ +R +MF       T  + RT+A+KPMNCP H+ VFN GLKSY++LP+RLAE
Sbjct: 303 WEKSGHWEKFRDDMFT------TASENRTYAIKPMNCPCHIQVFNQGLKSYKDLPIRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNEPSG+LHGLMRVR FTQDDAH+FCT+EQ+  E     +L+  +YK FGF++I+
Sbjct: 357 FGSCHRNEPSGALHGLMRVRNFTQDDAHIFCTEEQIQEEVSTFIDLVFEVYKTFGFDEII 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +KLSTRPEKRVGS+ +WD +E  +   LD         +   +  GEGAFYGPK E+ LK
Sbjct: 417 IKLSTRPEKRVGSEDIWDKSEEALTKALD------NKNLKWELQPGEGAFYGPKIEFSLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D + R WQCGTIQVDF++P R +A YV+  +EK +PVM+HRA+ GS ERFIGI+IE ++ 
Sbjct: 471 DCLSRVWQCGTIQVDFSMPIRLDATYVDIDNEKRNPVMLHRAILGSFERFIGILIEQYEA 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P+WL+P Q I+ +IT   +E   +   L+ ++    + D RNE I YKIRE ++ ++P
Sbjct: 531 KFPIWLAPYQIILLSITDRNIEKCLKFNELINNNGYRSKVDIRNEKIGYKIREATLGRVP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +I + GDKE    S+ +R          +L +   ++ +
Sbjct: 591 LIAVIGDKEEEIDSVALRALNGKNLGIFNLPNLFKLMDE 629


>gi|85858497|ref|YP_460699.1| threonyl-tRNA synthetase [Syntrophus aciditrophicus SB]
 gi|85721588|gb|ABC76531.1| threonyl-tRNA synthetase [Syntrophus aciditrophicus SB]
          Length = 645

 Score =  619 bits (1595), Expect = e-175,   Method: Composition-based stats.
 Identities = 270/647 (41%), Positives = 409/647 (63%), Gaps = 18/647 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI-EI 61
            +IK+  PDGS ++     T  DV  S + +L     A   N  + DLS  + +  + E 
Sbjct: 9   KEIKIVLPDGSERSHNEGVTVRDVLSSWNPALLATTAAARYNQNLLDLSRSLHDDGVLEP 68

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           I       L ++RHS +HIMA+AVQ I+P V V+IGP IEDGFYYDF+    F+ +EL +
Sbjct: 69  IDIHSREGLEILRHSISHIMAQAVQDIFPGVLVSIGPAIEDGFYYDFEYGNTFTPEELEK 128

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-ENVTLYRQGEWF 180
           IE +MQEI+  D PF+++ +S E+A   F+ K E+YKVE+L  +P   + V+LYRQG + 
Sbjct: 129 IEARMQEIVKEDHPFVREEVSREEAVAFFQGKGESYKVELLNDLPGNIKTVSLYRQGHYT 188

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV ST  ++ F KL+ VAGAYWRGD    ML RIYGT + +++EL +YL  LEE
Sbjct: 189 DLCRGPHVPSTSMIRAF-KLLNVAGAYWRGDERNKMLQRIYGTGFASREELDEYLKILEE 247

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQ 298
           ++KRDHRKL +++DLF ++E+   G+I +H KG  +   +  +  +  ++  Y+ +  PQ
Sbjct: 248 AKKRDHRKLGKDLDLFQVSEEAGAGLIIFHPKGTILRTIIEDWEKKEHLRRGYDMVMGPQ 307

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L   LW++SGH+D YR NM+  +       + +++ +KPMNC  H+ ++   ++SYR+L
Sbjct: 308 ILKVDLWKKSGHFDHYRENMYFTEV------EGQSYGIKPMNCLSHMLIYKTKIRSYRDL 361

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R  E G+V+R+E +G LHGL+R R FTQDDAH+ CT EQ+ +E   I + +    K F
Sbjct: 362 PIRYFELGTVHRHEKTGVLHGLLRARQFTQDDAHILCTPEQLNSEIRAIADFVGYAMKIF 421

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE   V+LSTRP+  +GSD  W+ A + ++  L        +++   +  G+GAFYGPK
Sbjct: 422 GFEYE-VELSTRPDNSIGSDQDWELATSALENALKD------NQMTYDINEGDGAFYGPK 474

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++ LKDA+ R WQC TIQ DF LP RF+  YV +  EK  PVM+HR + G+IERF+G++
Sbjct: 475 IDFKLKDALKRKWQCATIQCDFTLPERFDLTYVGADGEKHRPVMLHRVILGAIERFMGVL 534

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE++ G  P+WL+P+QAI+ ++T   + Y + +   L    + +E DFRNE + YKIRE 
Sbjct: 535 IEHYGGAFPVWLAPVQAILLSVTDRHIPYGKTVYQQLMDAGIRVEGDFRNEKLGYKIREA 594

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
             +KIP +++ GDKE +   + +R+ G      + +   I ++ ++S
Sbjct: 595 QTQKIPYMLVIGDKEMASGEVAVRQRGGDNLGTLPVSAFIELVKEKS 641


>gi|19703946|ref|NP_603508.1| threonyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|22654111|sp|Q8RFS6|SYT_FUSNN RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|19714122|gb|AAL94807.1| Threonyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
          Length = 620

 Score =  619 bits (1595), Expect = e-175,   Method: Composition-based stats.
 Identities = 283/627 (45%), Positives = 400/627 (63%), Gaps = 17/627 (2%)

Query: 24  SDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIRHSCAHIMA 82
            ++A+ IS SLAKK+V   ++GK  D+S  +  +  +E I  + P    ++RHS AH+MA
Sbjct: 2   FEIAKGISNSLAKKSVGAKVDGKNVDMSYILDHDAEVEFIDIDSPEGEDIVRHSTAHLMA 61

Query: 83  EAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLS 142
           +AV  ++P+ +V IGP+IE+GFYYDFD  + F+ ++L +IE +M+ I+  +    K  L 
Sbjct: 62  QAVLRLYPDTKVTIGPVIENGFYYDFDPVEQFTEEDLEKIEAEMKRIVKENIKLEKYVLP 121

Query: 143 HEKARELFES-KKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLM 201
            ++A E F    K  YKVE++E IP  E V+ Y+QG++ DLCRG HV STG +K F KL 
Sbjct: 122 RDEAIEYFRDVDKNKYKVEVVEGIPQGEQVSFYKQGDFTDLCRGTHVPSTGYLKAF-KLR 180

Query: 202 KVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED 261
            VAGAYWRG+S   ML RIYG +++ ++ L  +L  +EE+EKRDHRKL +E++LF ++E 
Sbjct: 181 TVAGAYWRGNSKNKMLQRIYGYSFSNEERLKHHLKLMEEAEKRDHRKLGKELELFFLSEY 240

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           G G  F+  KG  +   LI   RR+ +   Y+++ TP +L++ LW+ SGHW +YR NM+ 
Sbjct: 241 GPGFPFFLPKGMIVRNVLIDLWRREHEKAGYQQLETPIMLNKELWEISGHWFNYRENMYT 300

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +       D   FA+KPMNCPG V  F H L SY++LP RLAE G V+R+E SG+LHGL
Sbjct: 301 SEI------DELEFAIKPMNCPGGVLAFKHQLHSYKDLPARLAELGRVHRHEFSGALHGL 354

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           MRVR FTQDD+H+F T +Q+ +E + + NLI   Y      +  ++LST+PEK +GS  +
Sbjct: 355 MRVRSFTQDDSHIFMTPDQVQDEIIGVVNLIDKFYSKLFGFEYEIELSTKPEKAIGSQEI 414

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDF 500
           WD AE  + G LD +           +  G+GAFYGPK ++ +KDAIGR WQCGTIQ+DF
Sbjct: 415 WDMAEAALAGALDKLGR------KYKINPGDGAFYGPKLDFKIKDAIGRMWQCGTIQLDF 468

Query: 501 NLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTI 560
           NLP RF+  Y+    EK  PVM+HR ++GSIERFIGI+IE++ G  P+WL+P+Q  V T+
Sbjct: 469 NLPERFDVTYIGEDGEKHRPVMLHRVIYGSIERFIGILIEHYAGAFPMWLAPVQVKVLTL 528

Query: 561 TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH-SIKKIPIIIICGDKEASERSI 619
               + YA+EI N L+   +  E D RNETI YKIRE     KIP+ +I G  E   + +
Sbjct: 529 NDECIPYAKEIMNKLEELGIRAELDDRNETIGYKIREANGKYKIPMQLIIGKNEVENKEV 588

Query: 620 GIRRFGSTTTQKVSLLDAIPILTKESL 646
            IRRFGS       L +    +  E+ 
Sbjct: 589 NIRRFGSKDQFSKLLDEFYTYVVDEAT 615


>gi|24583842|ref|NP_723726.1| Threonyl-tRNA synthetase, isoform C [Drosophila melanogaster]
 gi|28574141|ref|NP_524839.3| Threonyl-tRNA synthetase, isoform B [Drosophila melanogaster]
 gi|7297922|gb|AAF53167.1| Threonyl-tRNA synthetase, isoform B [Drosophila melanogaster]
 gi|22946308|gb|AAN10805.1| Threonyl-tRNA synthetase, isoform C [Drosophila melanogaster]
          Length = 690

 Score =  619 bits (1595), Expect = e-175,   Method: Composition-based stats.
 Identities = 240/646 (37%), Positives = 362/646 (56%), Gaps = 22/646 (3%)

Query: 3   SDIKLTFPDGS-IKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIE 60
             IK+T PDG  +       T  +VA  IS+ LA   V   +NG+V DL   +    +++
Sbjct: 50  EPIKVTLPDGKQVDATSWETTPYEVARGISQGLADNTVISKVNGEVWDLDRVLEGNCTLQ 109

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDEL 119
           ++  +DP + AV  HS AHIM EA++ I+    +  GP IE+GFYYD   E +  S+++ 
Sbjct: 110 LLKFDDPEAQAVFWHSSAHIMGEAMERIYGGH-LCYGPPIENGFYYDMHLEGEGISTNDY 168

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             +E  +++I+     F +  +      E+F+     +KV IL      +  T+Y+ G  
Sbjct: 169 GAMEGLVKQIVKEKQNFERLEMKKSDLLEMFKY--NEFKVRILNEKVTTDRTTVYKCGSL 226

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHVR TG+VK   K+ K +  YW G ++   L R+YG ++   ++L ++    E
Sbjct: 227 IDLCRGPHVRHTGKVK-ALKITKNSSTYWEGKADAETLQRVYGISFPDPKQLKEWEKLQE 285

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+ KRDHRK+ RE +LF   E   G  F+  +G  I+ TL+ +++ + +   ++E+ +P 
Sbjct: 286 EAAKRDHRKIGREQELFFFHELSPGSCFFQPRGAHIYNTLMGFIKAEYRKRGFQEVISPN 345

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           + +  LW  SGHW  Y  NMF+ +       +   FALKPMNCPGH  +F++  +S+REL
Sbjct: 346 IYNAKLWMTSGHWQHYAENMFSFE------AEKEKFALKPMNCPGHCLIFDNRNRSWREL 399

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+A+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E       +  +Y  F
Sbjct: 400 PLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAPEQIKSEMKGCLEFLKYVYTIF 459

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF   +V LSTRP+  +G    W+DAE  +   L+      ++        G+GAFYGPK
Sbjct: 460 GFSFQLV-LSTRPDNYLGELEQWNDAEKALAESLNEFGMPWKE------NPGDGAFYGPK 512

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +  + DA+ R  QC TIQ+DF LP RFN  Y+    EK  PV+IHRA+ GS+ER I I+
Sbjct: 513 IDITIMDALKRAHQCATIQLDFQLPIRFNLSYIADDGEKKRPVIIHRAILGSVERMIAIL 572

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FRNETINYKIRE 597
            ENF G  P WLSP Q +V  +  +  +YAQ + + L       E D    +T+N KIR 
Sbjct: 573 TENFAGKWPFWLSPRQVMVVPVGPAYDQYAQSVRDQLHDAGFMSEADCDAGDTMNKKIRN 632

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             + +   I++ GDKE S  ++ +R   +    +VS+ + I  L K
Sbjct: 633 AQLAQFNFILVVGDKERSSNTVNVRTRDNKVHGEVSVAELITKLQK 678


>gi|78778982|ref|YP_397094.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Prochlorococcus
           marinus str. MIT 9312]
 gi|123755107|sp|Q31BT7|SYT_PROM9 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|78712481|gb|ABB49658.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Prochlorococcus
           marinus str. MIT 9312]
          Length = 638

 Score =  618 bits (1594), Expect = e-175,   Method: Composition-based stats.
 Identities = 294/639 (46%), Positives = 425/639 (66%), Gaps = 15/639 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS K F    T  ++A+SI   LAK  +A  +N  + D + P++ +  + IIT +
Sbjct: 4   ITLPDGSKKVFEKSVTILEIAQSIGAGLAKATIAGKVNDVLIDATLPIKNDSKVVIITSK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   + +IRHS AH++  AV+ I+ ++++AIGP+IEDGFYYD   EQ F+ ++L +IE +
Sbjct: 64  DKEGIEIIRHSFAHLIGHAVKQIYSDIKMAIGPVIEDGFYYDIFSEQRFTPEDLIKIENR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           + ++I  +       +S E+A + F+ + E +K+ I+E IP +  + LY+  E+ D+CRG
Sbjct: 124 INKLIKTNYDVEILQVSKEEAIKTFKERDETFKLRIIEEIPEEGLINLYKHEEYIDMCRG 183

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +T  ++ F KL+K++G+YWRG+S    L RIYGTAW  ++EL  YL  +EE+EKRD
Sbjct: 184 PHVPNTRHLRHF-KLLKLSGSYWRGNSENEALQRIYGTAWAKEKELKDYLTRIEEAEKRD 242

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHL 304
           HRKL ++  LFHI E+  G+IFWH  GW I+Q L  Y+R  +K +DY EI TPQ +D+ L
Sbjct: 243 HRKLGKKHSLFHIQEESPGMIFWHPNGWTIYQVLEKYIREILKKNDYLEIKTPQAVDKSL 302

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHW+ +R +MF       T  + RT+A+KPMNCP H+ +FN GLKSY++LP+RLAE
Sbjct: 303 WEKSGHWEKFRDDMFT------TASENRTYAIKPMNCPCHIQLFNQGLKSYKDLPIRLAE 356

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGS +RNEPSG+LHGLMRVR FTQDDAH+FC +EQ+  E     +L+  +YK FGF++I+
Sbjct: 357 FGSCHRNEPSGALHGLMRVRNFTQDDAHIFCKEEQIQEEVSTFIDLVFEVYKTFGFDEII 416

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +KLSTRPEKRVGS+ +WD +E  +   LD         +   +  GEGAFYGPK E+ LK
Sbjct: 417 IKLSTRPEKRVGSEEIWDKSEEALTKALD------NKNLKWELQPGEGAFYGPKIEFSLK 470

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D + R WQCGTIQVDF++P R  A YV+  +EK +PVM+HRA+ GS ERFIGI+IE ++ 
Sbjct: 471 DCLNRVWQCGTIQVDFSMPIRLEATYVDIDNEKRNPVMLHRAILGSFERFIGILIEQYEA 530

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P+WL+P Q I+ +IT    E   +   L+ ++    + D RNE I YKIRE +I +IP
Sbjct: 531 KFPIWLAPYQIILLSITDRNNEKCLKFNELINNNGYRSKVDIRNEKIGYKIREATISRIP 590

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +I + GDKE    S+ +R    T     +L +   ++ +
Sbjct: 591 LIAVIGDKEEEIDSVALRALDGTNLGIFNLPNLYKLMDE 629


>gi|315607978|ref|ZP_07882971.1| threonine--tRNA ligase [Prevotella buccae ATCC 33574]
 gi|315250447|gb|EFU30443.1| threonine--tRNA ligase [Prevotella buccae ATCC 33574]
          Length = 650

 Score =  618 bits (1594), Expect = e-175,   Method: Composition-based stats.
 Identities = 246/650 (37%), Positives = 390/650 (60%), Gaps = 19/650 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEII 62
            +K+TFPDGS++ +    TG  +AESIS +LA+  V+  +NG+  +L+ P+ +  +I + 
Sbjct: 1   MVKITFPDGSVREYEQGVTGLQIAESISPALARNVVSCGVNGETVELNRPINDDATIALY 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD--FDKEQPFSSDELA 120
             ED        H+ AH++AEA++ ++P +Q   GP IE+GF+YD      Q  S ++  
Sbjct: 61  KFEDEEGKHTFWHTSAHLLAEALKELYPGIQFGFGPAIENGFFYDVMPAGGQTISENDFP 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IE KM E+  +D P +++ +   +A E F++  + YK E ++      +++ Y QG + 
Sbjct: 121 KIEAKMLELAKKDEPVVRREVPKAEALEEFKADGQTYKCEHIDLDLEDGSISTYTQGNFT 180

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ STG +K   K+  VAGA+WRGD+ R  ++RIYG ++  ++ L +YL  LEE
Sbjct: 181 DLCRGPHLISTGAIK-ALKITSVAGAFWRGDAKREQMTRIYGISFPKKKMLDEYLVMLEE 239

Query: 241 SEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++KRDHRK+ +EM+LF  +   G G+  W  KG ++   L   +R  +   +Y+E+ TP 
Sbjct: 240 AKKRDHRKIGKEMELFMFSERVGKGLPIWLPKGTELRLRLQELLRSMLRPYNYQEVITPG 299

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +  + L+  SGH+  Y  + F       T ++   + LKPMNCP H  VF    +SY++L
Sbjct: 300 IGGKSLYVTSGHYAHYGKDAFQ---PIHTPEEDEEYMLKPMNCPHHCEVFARKPRSYKDL 356

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG+V+R E SG LHGL RVR FTQDDAH+F   +Q+  E     ++I+ ++  F
Sbjct: 357 PLRIAEFGTVFRYEKSGELHGLTRVRTFTQDDAHIFVRPDQVKAEFETNIDIILKVFNIF 416

Query: 419 GFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           GF+    ++S R        +GSD +W+++E  +K         ++  +   V LGE AF
Sbjct: 417 GFDNYEAQISLRDPNDKEKYIGSDEVWEESETAIKEA------CAEKGLKARVELGEAAF 470

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK ++++KDAIGR WQ GTIQVD+NLP+RF   Y    + K  PVMIHRA FGS+ERF
Sbjct: 471 YGPKLDFMVKDAIGRRWQLGTIQVDYNLPNRFKLEYTAEDNSKKTPVMIHRAPFGSLERF 530

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             ++IE+  G+ PLWL+P Q  +  I+    +YA+ +A    S  +    D RNE I  K
Sbjct: 531 TAVLIEHTAGHFPLWLTPDQVAILPISEKYNDYAKSVARYFDSVGVRAIIDERNEKIGRK 590

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IR++ +K++P ++I G+KE++E  + +R+ G      +++ +    +  E
Sbjct: 591 IRDNELKRVPYMVIVGEKESAEGLVSMRKQGGGEQATMTMEEFAQRINSE 640


>gi|312384017|gb|EFR28854.1| hypothetical protein AND_02684 [Anopheles darlingi]
          Length = 766

 Score =  618 bits (1594), Expect = e-175,   Method: Composition-based stats.
 Identities = 246/648 (37%), Positives = 371/648 (57%), Gaps = 26/648 (4%)

Query: 3   SDIKLTFPDGSIKNFP---VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGS 58
           + IK+T PDG  K         T  DVA+ IS+ LA   V   +N ++ DL  P+  +  
Sbjct: 34  TPIKVTLPDG--KEVEGLCWQTTPYDVAKGISQGLADNTVIARVNNELWDLDRPLEADCK 91

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQP-FSSD 117
           ++++  +DP + AV  HS AHI+ EA++  +    +  GP I++GFYYD   E    S+ 
Sbjct: 92  LQLLKFDDPEAQAVFWHSSAHILGEAMEKRYGGH-LCYGPPIDNGFYYDMFLEGSGISNQ 150

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +   +E +++ I+    PF +  +       +FE  +  +KV IL      E  T+YR G
Sbjct: 151 DYGVLESEVKRIVKEKQPFERLEMKKSDLLRMFEYNQ--FKVRILNEKVTTETTTVYRCG 208

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
              DLCRGPHVR+TG+VK   K++K +  YW G ++   L R+YG ++   ++L ++   
Sbjct: 209 PLIDLCRGPHVRNTGKVK-ALKVVKNSSTYWEGKADAETLQRVYGISFPDPKQLKEWERI 267

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINT 296
            EE+ KRDHRKL RE +LF   E   G  F+  KG  I+ TL++++R + +   ++E+ +
Sbjct: 268 QEEAAKRDHRKLGREQELFFFHELSPGSCFFQPKGAFIYNTLMNFIRAEYRKRGFQEVIS 327

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P + +  LWQ SGHW  Y  NMF+ +       +  TFALKPMNCPGH  +F+H  +S+R
Sbjct: 328 PNIYNAKLWQTSGHWQHYAENMFSFE------SEKETFALKPMNCPGHCLIFDHRNRSWR 381

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ELP+R+A+FG ++RNE SG+L GL RVR F QDDAH+FC  +Q+  E     + +  +Y 
Sbjct: 382 ELPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCMPDQIREEITGCLDFLRHVYT 441

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
            FGF   +V LSTRPEK +G   +W++AE  +   LD      ++        G+GAFYG
Sbjct: 442 VFGFTFNLV-LSTRPEKYLGEIEVWNEAEKALAESLDKFGEPWKE------NPGDGAFYG 494

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK +  + DA+ R  QC TIQ+DF LP RFN  YV+   EK  PV+IHRAV GS+ER I 
Sbjct: 495 PKIDITIMDALKRHHQCATIQLDFQLPIRFNLNYVDDSGEKKRPVIIHRAVLGSVERMIA 554

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKI 595
           I+ EN+ G  P WLSP Q +V  +  +  EYA ++   L     ++E D    +T+N KI
Sbjct: 555 ILTENYAGKWPFWLSPRQVMVVPVGPAYDEYADKVRLRLHDAGFTVEADLDAGDTMNKKI 614

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           R   + +   I++ G+KE S  ++ +R   +    +V++ + +  L K
Sbjct: 615 RNAQLAQFNFILVVGEKERSSETVNVRTRDNKVHGEVTVDELVTKLAK 662


>gi|222640294|gb|EEE68426.1| hypothetical protein OsJ_26793 [Oryza sativa Japonica Group]
          Length = 701

 Score =  618 bits (1594), Expect = e-175,   Method: Composition-based stats.
 Identities = 232/649 (35%), Positives = 370/649 (57%), Gaps = 24/649 (3%)

Query: 3   SDIKLTFPDGSIKNFPVH-ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIE 60
             I++T PDG++K+     +T  D+A+ IS  LA   +   +NG + D++ P+  +  ++
Sbjct: 65  EPIRITLPDGAVKDGKKWISTPMDIAKEISSGLANSCLIAQVNGTLWDMTRPLEGDCELK 124

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII--EDGFYYD-FDKEQPFSSD 117
           +   +         HS AHI+ E+++  +   ++ IGP     +GFYYD +  +   +  
Sbjct: 125 LFKFDSNEGRDTFWHSSAHILGESLERAY-GCKLCIGPCTTRGEGFYYDAYYNDLTLNET 183

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
               I+ + Q+ +A   PF +  +S  +A E+F      +KVEI+  +P  + +T+YR G
Sbjct: 184 HFGIIDAQAQKAVAEKQPFERIEVSRAEALEMFAE--NKFKVEIINELPEDKTITVYRCG 241

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
              DLCRGPH+ +T  VK F   +K + +YWRG ++R  L R+YG ++   + L +Y + 
Sbjct: 242 PLVDLCRGPHIPNTSFVKAF-ACLKASSSYWRGKADRESLQRVYGISFPDSKRLKEYKHL 300

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINT 296
           LEE++KRDHR L +  DLF   +   G  F+   G  I+  L+ ++R++ +   Y+E+ +
Sbjct: 301 LEEAKKRDHRLLGQTQDLFFFHQLSPGSCFFLPHGAIIYNKLMDFLRQQYRDRGYQEVLS 360

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P + +  LW+ SGH  +Y+ NMF  +       + + F LKPMNCPGH  +F H ++SYR
Sbjct: 361 PNIYNMQLWETSGHAANYKENMFVFEI------EKQEFGLKPMNCPGHCLMFEHRVRSYR 414

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ELP+R+A+FG ++RNE SG+L GL RVR F QDDAH+FC + Q+ +E   + + I  +Y+
Sbjct: 415 ELPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCRESQIKDEVKAVLDFINYVYE 474

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
            FGF+  + +LSTRPEK +G    W+ AE  +   L+      Q      +  G+GAFYG
Sbjct: 475 IFGFKYEL-ELSTRPEKYLGDIETWNKAEQQLTEALNEFGKPWQ------INEGDGAFYG 527

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK-CHPVMIHRAVFGSIERFI 535
           PK +  + DA+ R +QC T+Q+DF LP RF   Y      K   PVMIHRA+ GS+ER  
Sbjct: 528 PKIDIGVFDALKRKFQCATLQLDFQLPLRFKLTYSAEDEAKLERPVMIHRAILGSVERMF 587

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            I++E++ G  PLWLSP QAIV +I+S++VEYA+++   +      +  D  + TI  K+
Sbjct: 588 AILLEHYNGKWPLWLSPRQAIVCSISSNSVEYAKQVRARIHEAGFHVAIDETDRTIQKKV 647

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           RE  + +   I++ G +EA    + +R         VS+ D I    +E
Sbjct: 648 REAQLAQFNYILVVGAQEAETGQVSVRVRDKAELATVSIDDIITRFKEE 696


>gi|204636657|gb|ACI01751.1| putative threonyl-tRNA synthetase [Escherichia coli]
          Length = 652

 Score =  618 bits (1593), Expect = e-174,   Method: Composition-based stats.
 Identities = 302/651 (46%), Positives = 421/651 (64%), Gaps = 14/651 (2%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIE 60
              +  T PDGS+K+    AT  +VAESI  S++K AV   I+GK  DL +  +  G + 
Sbjct: 11  SEPLTFTLPDGSLKHVRKGATLQNVAESIGSSVSKSAVYAEIDGKCVDLLEKAKNSGKLN 70

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           IIT  D  +L  IR  C  ++A +V+ ++P  ++  G + ++GFYYDF  ++PF+ D+L 
Sbjct: 71  IITVFDEEALGPIRRGCLLLLAASVKQLFPSARMVEGQLTKEGFYYDFAVDKPFTRDDLG 130

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IE+ M  +IA + P +K+ ++  +A + FE + E +K   L  I A ++VTL    ++ 
Sbjct: 131 MIEQHMTSLIAENPPIIKEQVTRAQAIDCFEQRGEKFKSTELMEILADKSVTLCHLRQFT 190

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           D   GP V     +K   KL+ V+GAYWRG++N   L RIYGTAW ++++L  +L    E
Sbjct: 191 DGFNGPLVPDLRFLKN-MKLLNVSGAYWRGEANNVQLQRIYGTAWASKKQLDGWLEKTAE 249

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQV 299
           +EKRDHRKL RE+DLFH  ++  G +FWH +GW IFQ+LI+YMR R     Y E+NTP V
Sbjct: 250 AEKRDHRKLGRELDLFHFQDNAPGAVFWHPRGWTIFQSLIAYMRSRHEVAGYVEVNTPDV 309

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           +D+ LW+ SGHWD+YR +MF  +      +D R FALKPMNCPG V++F +G+KSYR+LP
Sbjct: 310 MDRSLWEISGHWDNYRDHMFTTQ-----TEDGRNFALKPMNCPGAVSLFKYGIKSYRDLP 364

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           VRL+EFG V+R EPSGSLHGL+RVR FTQDDAH+FCT +Q+  EC  I  L++ IYK FG
Sbjct: 365 VRLSEFGKVHRYEPSGSLHGLLRVRHFTQDDAHIFCTLQQVEGECKSILQLVLDIYKQFG 424

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           FE++ +KLSTRPEKR+GSDA WD  EN +   L+         +   V  GEGAFYGPK 
Sbjct: 425 FEEVAIKLSTRPEKRMGSDADWDRLENALSASLEA------QGLQWSVNPGEGAFYGPKL 478

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           E++L+DAIGRDWQCGT+QVD NLP RF+  Y+        PVM+HRA+FGS+ERF GI++
Sbjct: 479 EFVLRDAIGRDWQCGTLQVDMNLPERFDIGYIAEDGSTKRPVMLHRALFGSLERFTGILL 538

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E++ G LP WLSP+QA+V TIT     YA+++   L+   L  E D RNE I +KIRE +
Sbjct: 539 EHYVGKLPAWLSPVQAVVMTITDKQHHYAEQVLKALRKKGLRCEADLRNEKIGFKIREQT 598

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDC 650
           + +IP ++I GD E +   + +R         + L +A   +     PP+ 
Sbjct: 599 LARIPYLLIVGDAEENAARVTVRDRTGRCMGTLLLNEAADAIKICCQPPEV 649


>gi|170036087|ref|XP_001845897.1| threonyl-tRNA synthetase [Culex quinquefasciatus]
 gi|167878588|gb|EDS41971.1| threonyl-tRNA synthetase [Culex quinquefasciatus]
          Length = 699

 Score =  618 bits (1593), Expect = e-174,   Method: Composition-based stats.
 Identities = 241/648 (37%), Positives = 370/648 (57%), Gaps = 22/648 (3%)

Query: 3   SDIKLTFPDGS-IKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIE 60
           + I +T PDG  ++     +T  DVA+ IS+ LA   V   +N ++ DL  P+     ++
Sbjct: 59  TPITVTLPDGKEVQATSWESTPYDVAKGISQGLADNTVIARVNNELWDLDRPLEGNCKLQ 118

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQP-FSSDEL 119
           ++  +DP + AV  HS AHI+ EA++  +    +  GP IE+GFYYD   E    S+ + 
Sbjct: 119 LLKFDDPEAQAVFWHSSAHILGEAMEKRYGGH-LCYGPPIENGFYYDMRLEGAGISNSDY 177

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             +E  +++I+    PF +  +      ++FE     +K  IL      E  T+YR G  
Sbjct: 178 GALETDVKKIVKEKQPFERLEMKKSDLLKMFEY--NEFKCRILNEKVTTETTTVYRCGPL 235

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHVR TG+VK   K++K +  YW G ++   L R+YG ++   ++L ++    E
Sbjct: 236 IDLCRGPHVRHTGKVK-ALKVVKNSSTYWEGKADAETLQRVYGISFPDPKQLKEWEKIQE 294

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+ KRDHRKL +E +LF   E   G  F+  KG  I+ TL++++R + +   ++E+ +P 
Sbjct: 295 EAAKRDHRKLGKEQELFFFHELSPGSCFFQPKGAHIYNTLMNFIRAEYRKRGFQEVISPN 354

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           + +  LWQ SGHW  Y  NMF+ +       +  TFALKPMNCPGH  +F+H  +S+REL
Sbjct: 355 IYNAKLWQTSGHWQHYAENMFSFE------SEKETFALKPMNCPGHCLIFDHRNRSWREL 408

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+A+FG ++RNE SG+L GL RVR F QDDAH+FC  +Q+  E     + +  +Y  F
Sbjct: 409 PLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCMPDQIREEITGCLDFLKHVYGVF 468

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF   +V LSTRPEK +G   +W+DAE  +   LD      ++        G+GAFYGPK
Sbjct: 469 GFTFNLV-LSTRPEKYLGEIEVWNDAEKALAESLDKFGEPWKE------NPGDGAFYGPK 521

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +  + DA+ R  QC TIQ+DF LP RFN  Y++ + EK  PV++HRA+ GS+ER I I+
Sbjct: 522 IDITIMDALKRAHQCATIQLDFQLPIRFNLNYIDDNGEKKRPVIVHRAILGSVERMIAIL 581

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIRE 597
            EN+ G  P WLSP Q +V  +  +  EYA ++   L       E D    +T+N KIR 
Sbjct: 582 TENYAGKWPFWLSPRQIMVVPVGPAYDEYADKVRLRLHDAGFMAEADLDAGDTMNKKIRN 641

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
             + +   I++ G+KE S  ++ +R   +    +VS+ + +  L +++
Sbjct: 642 AQLAQFNFILVVGEKERSSETVNVRTRDNKVHGEVSVEELLVKLRRQA 689


>gi|224062355|ref|XP_002195014.1| PREDICTED: similar to probable threonyl-tRNA synthetase 2,
           cytoplasmic [Taeniopygia guttata]
          Length = 719

 Score =  617 bits (1592), Expect = e-174,   Method: Composition-based stats.
 Identities = 238/648 (36%), Positives = 365/648 (56%), Gaps = 23/648 (3%)

Query: 2   PSDIKLTFPDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
              IK+T+ DG          T   +A  IS+ LA  AV   +NG++ DL  P+  + ++
Sbjct: 76  SRSIKITWTDGETVEGESWKTTPYQLAVGISQVLASNAVIAKVNGELWDLDRPLEGDCTL 135

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDE 118
           E++T ++  + AV  HS AHI+ EA++  +    +  GP IE+GF+YD   E +  SS E
Sbjct: 136 ELLTFDNEEAKAVYWHSSAHILGEAMEGYFGGC-LCYGPPIENGFHYDMYIEDRSVSSTE 194

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
              +E + + II     F +  +  E   ++F+  K  +K  IL         T+YR G 
Sbjct: 195 FPLLENRCKNIIKEKQAFERLEVKKEILLDMFKYNK--FKCRILNEKVKTPTTTVYRCGP 252

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLC+GPHVR TG++K   K++K +  YW G S+   L RIYG ++   + + ++    
Sbjct: 253 LIDLCKGPHVRHTGKIK-ALKIIKSSSTYWEGKSDMETLQRIYGISFPDNKMMKEWEKIQ 311

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE++ RDHRK+ +E +LF   +   G  F+  +G  ++ TL+ ++R + +  ++ E+ +P
Sbjct: 312 EEAKNRDHRKIGKEQELFFFHDLSPGSCFFLPRGAFLYNTLVDFIRGEYRRRNFTEVVSP 371

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            V +  LW+ SGHW  Y  NMF+ +       +  TFA+KPMNCPGH  +F H  +S+RE
Sbjct: 372 NVFNSKLWEASGHWQHYSENMFSFEV------EKETFAIKPMNCPGHCLMFAHRPRSWRE 425

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+RLA+FG ++RNE SG+L GL RVR F QDDAH+FCT EQ+  E     + + S+Y  
Sbjct: 426 LPLRLADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCTMEQIEEEIKDCLDFLKSVYAV 485

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF   +  LSTRPE  +G   +WD AE  ++  L+             +  G+GAFYGP
Sbjct: 486 FGFTFQLH-LSTRPENYLGDLEIWDHAEKQLQNSLNNFGEQWN------LNPGDGAFYGP 538

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIG 536
           K +  +KDAIGR  QC TIQ+DF LP RFN  YV     +K  PV+IHRA+ GS+ER I 
Sbjct: 539 KIDIKIKDAIGRYHQCATIQLDFQLPIRFNLTYVGKDGDDKKRPVIIHRAILGSVERMIA 598

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FRNETINYKI 595
           I+ EN+ G  P WLSP Q +V  +  ++ +YAQ++ +         + D  ++ T+N KI
Sbjct: 599 ILAENYGGKWPFWLSPRQVMVVPVGPASEQYAQQVCDQFFEAGFMSDVDLDQSCTLNKKI 658

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           R   + +   I++ G+KE +  ++ +R   +    ++S+   I  L K
Sbjct: 659 RNAQLAQYNFILVVGEKEKANNAVNVRTRDNKVHGEISVSSTIEKLKK 706


>gi|119358269|ref|YP_912913.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Chlorobium
           phaeobacteroides DSM 266]
 gi|119355618|gb|ABL66489.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Chlorobium
           phaeobacteroides DSM 266]
          Length = 675

 Score =  617 bits (1592), Expect = e-174,   Method: Composition-based stats.
 Identities = 254/649 (39%), Positives = 387/649 (59%), Gaps = 16/649 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           I +T PDGSI++FP  +TG D+A SI R LA+ A+A+   GK  +L  P+ E G +EI+T
Sbjct: 26  IAITLPDGSIRSFPYGSTGLDIALSIGRKLAQDALAITFEGKALELDTPLTESGHMEILT 85

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            + P    +  HS +H+MA+A++ ++   +   GP IE GFYYD   +  F  ++L  IE
Sbjct: 86  FDSPEGKEIFWHSSSHLMAQAIEELFAGTRFGAGPAIEQGFYYDIASDHRFREEDLRAIE 145

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFE-SKKEAYKVEILES-IPAKENVTLYRQGEWFD 181
            +M EI  R+S   ++ +S E+A E F+  + + YKVEILE  +     V+LY Q  + D
Sbjct: 146 LRMIEISKRESQINRREMSREEAIEFFKTVRNDPYKVEILEDTLKNTPVVSLYEQENFTD 205

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LC GPH+ ST ++K       ++ +YWRGDS+R  + RIYG  + +++ L ++   +EE+
Sbjct: 206 LCSGPHLHSTSKIKAVQLT-NISTSYWRGDSSRESMQRIYGITFPSEKLLKEHTARVEEA 264

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQV 299
           ++RDHRKL  E++LF ++ + GSG+  W  KG  I   L ++++ + +   Y  + TP +
Sbjct: 265 KRRDHRKLGAELELFMLSPEIGSGLPVWLPKGAIIRNELETFLKEEQRKRGYLPVYTPHI 324

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +  L+++SGH+  Y  + F      D       + LKPMNCP H  ++N  L+SYR+LP
Sbjct: 325 GNIELYKRSGHYPYYSDSQFPPLTYHDENGKQEQYLLKPMNCPHHHLIYNVKLRSYRDLP 384

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +RLAEFG+VYR+E SG L+GL+R RGFTQDD+H++C  +Q+ +E     +L   ++   G
Sbjct: 385 IRLAEFGTVYRHEQSGELNGLVRARGFTQDDSHIYCRPDQLVDEICNAIDLTQHVFATLG 444

Query: 420 FEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           F  +  +LS        K  G+  +W+ AE  +    + +       IN  + +GE +FY
Sbjct: 445 FSDVQTRLSMHDPLNQEKYGGTPEVWEQAEKDVTEAANRMG------INYVIGIGEASFY 498

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++I++DAIGR WQ GT+QVD+ +P RF+  Y+ S S+K  P++IHRA FGS+ERFI
Sbjct: 499 GPKIDFIVRDAIGRKWQLGTVQVDYVMPERFDLSYIGSDSQKHRPIVIHRAPFGSMERFI 558

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
           G++IE+  GN PLWL+P+QAI+  +      YA+ I   L    +  E D RNE I  KI
Sbjct: 559 GVLIEHTAGNFPLWLAPVQAIIMPLGEEIHAYAKSIHEKLLHSGIRAELDLRNEKIGKKI 618

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           RE  I K+P +II G KE     + +RR  +      +    I  L KE
Sbjct: 619 REAEIGKLPYMIIIGQKELESGQLSLRRHRTGDEGLFTTDSLIDKLKKE 667


>gi|332686097|ref|YP_004455871.1| threonyl-tRNA synthetase [Melissococcus plutonius ATCC 35311]
 gi|332370106|dbj|BAK21062.1| threonyl-tRNA synthetase [Melissococcus plutonius ATCC 35311]
          Length = 647

 Score =  617 bits (1592), Expect = e-174,   Method: Composition-based stats.
 Identities = 255/652 (39%), Positives = 395/652 (60%), Gaps = 23/652 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           S I +TFPDGS+  F    T  ++A++IS SLAKKA+A  +N +  DL+ P++ +G  E+
Sbjct: 2   SKINITFPDGSVNEFQSGITTLEIAKTISNSLAKKALAGKLNNEWLDLNQPIQLDGIFEV 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELA 120
           IT +   +LA++R+S A++MA A+  ++P ++     + + G+YYD D  + P ++++L 
Sbjct: 62  ITLDHEDALAILRNSAAYLMAHALSHLFPTIKFGTAQVTDTGYYYDTDNGDSPITAEDLP 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IE +M +I+ ++ P L++ +SHE+AR L       YK+E++  IP  EN+ +Y QG + 
Sbjct: 122 AIEAEMMQIVKKNEPNLRKVISHEEARRL--FADNPYKIELINEIPKNENIIIYEQGGFV 179

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DL +G  V STG+++ F KL+ VAGAYWRG+S   M+ RIYGTA+  Q++L +++   EE
Sbjct: 180 DLYQGVQVPSTGRIQIF-KLLSVAGAYWRGNSKNRMMQRIYGTAFFNQKDLKEFIKMQEE 238

Query: 241 SEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           +++RDHRKL +E+DLF I+++ GSG+ FW  KG  I +T+  Y+  ++I   Y+ + TP 
Sbjct: 239 AKERDHRKLGKELDLFMISQEVGSGLPFWLPKGATIRRTIERYITDKEISLGYQHVYTPI 298

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           + +  L++ SGHW  Y  +MF          D     L+PMNCP H+ V+   + SYREL
Sbjct: 299 MANVDLYKTSGHWAHYHEDMFPPMDMG----DGEMLVLRPMNCPHHMMVYKDTVHSYREL 354

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  T +D H F   +Q+  E  +I  L++++YKDF
Sbjct: 355 PIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKEEFKRILELMLAVYKDF 414

Query: 419 GFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
                  +LS R           DA+W  A+ ++KG +D +K      ++     GE AF
Sbjct: 415 NITDYKFRLSYRDPNNKDKYFDDDAMWTKAQTMLKGAMDELK------LDYFEAEGEAAF 468

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK-CHPVMIHRAVFGSIER 533
           YGPK +  +K A+G +    TIQ+DF LP RF+  Y+    E    PV+IHR +  ++ER
Sbjct: 469 YGPKLDVQVKTALGMEETLSTIQLDFLLPERFDLTYIGEDGENNHRPVVIHRGIVSTMER 528

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
           F+  +IE +KG  PLWL+PIQA +  ++  +  +YA E    L+   L IE D RNE + 
Sbjct: 529 FVSYLIEVYKGAFPLWLAPIQATIIPVSVDAHSDYAYETKERLQMRGLRIEVDDRNEKMG 588

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           YKIR    +KIP  I+ GDKE  + ++ IR +GS  T+ ++L   I  L  E
Sbjct: 589 YKIRASQTQKIPYQIVVGDKEVDDSTVTIRHYGSKETEVMALNLFIDSLIAE 640


>gi|237744663|ref|ZP_04575144.1| threonyl-tRNA synthetase [Fusobacterium sp. 7_1]
 gi|229431892|gb|EEO42104.1| threonyl-tRNA synthetase [Fusobacterium sp. 7_1]
          Length = 637

 Score =  617 bits (1592), Expect = e-174,   Method: Composition-based stats.
 Identities = 283/639 (44%), Positives = 405/639 (63%), Gaps = 17/639 (2%)

Query: 11  DGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRS 69
           +G  K F  +    ++A+  S SLAKK+V   ++GK  D+S  +     +E I  + P  
Sbjct: 6   NGESKEFNNNVNMFEIAKGFSNSLAKKSVGAKVDGKNVDMSYVLDHNAEVEFIDIDSPEG 65

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
             ++RHS AH+MA+AV  ++P+ +V IGP+IE+GFYYDFD  + F+ ++L +IE +M++I
Sbjct: 66  EDIVRHSTAHLMAQAVLRLYPDTKVTIGPVIENGFYYDFDPVEQFTEEDLEKIEAEMKKI 125

Query: 130 IARDSPFLKQYLSHEKARELFES-KKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           +  +    K  L  ++A + F    K  YKVEI+E+IP  E V+ Y+QG++ DLCRG HV
Sbjct: 126 VKENIKLEKYVLPRDEAIKYFRDVDKNKYKVEIVEAIPQGEQVSFYKQGDFTDLCRGTHV 185

Query: 189 RSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRK 248
            STG +K F KL  +AGAYWRG+S   ML RIYG +++ + +L ++L  +EE+EKRDHRK
Sbjct: 186 PSTGYLKAF-KLRALAGAYWRGNSKNKMLQRIYGYSFSNEDKLKKHLKLVEEAEKRDHRK 244

Query: 249 LAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQ 307
           L +E++LF ++E G G  F+  KG  +   L+   R++ +  +Y ++ TP +L++ LW+ 
Sbjct: 245 LGKELELFFLSEYGPGFPFFLPKGMIVRNVLVDLWRKEHEKAEYLQLETPIMLNKELWEI 304

Query: 308 SGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGS 367
           SGHW +YR NM+  +       D   FA+KPMNCPG V  F H L SY++LP RLAE G 
Sbjct: 305 SGHWFNYRENMYTSEI------DEVEFAIKPMNCPGGVLAFKHQLHSYKDLPARLAELGK 358

Query: 368 VYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKL 427
           V+R+E SG+LHGLMRVR FTQDD+H+F T EQ+ +E + + NLI   Y      +  ++L
Sbjct: 359 VHRHEFSGALHGLMRVRSFTQDDSHIFMTPEQVQDEIIGVVNLIDKFYSKLFGFEYEIEL 418

Query: 428 STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAI 487
           ST+PEK +GS  +WD AE+ + G LD +           +  G+GAFYGPK ++ +KDAI
Sbjct: 419 STKPEKAIGSQEIWDMAESALAGALDKLGR------KYKINPGDGAFYGPKLDFKIKDAI 472

Query: 488 GRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           GR WQCGTIQ+DFNLP RF+  Y+    EK  PVM+HR ++GSIERFIGI+IE++ G  P
Sbjct: 473 GRMWQCGTIQLDFNLPERFDVTYIGEDGEKHRPVMLHRVIYGSIERFIGILIEHYAGAFP 532

Query: 548 LWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH-SIKKIPII 606
           +WL+P+Q  V TI    V YA+EI   L    +  E D R ETI YKIRE     +IP+ 
Sbjct: 533 MWLAPVQVKVMTINDECVPYAKEIMAKLDELGIRAELDDRTETIGYKIREANGRYRIPMQ 592

Query: 607 IICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           +I G  E   + + IRRFGS      SL +    +  E+
Sbjct: 593 LIIGKNEVENKEVNIRRFGSKDQFSKSLDEFYNYVVDEA 631


>gi|300726434|ref|ZP_07059882.1| threonine--tRNA ligase [Prevotella bryantii B14]
 gi|299776282|gb|EFI72844.1| threonine--tRNA ligase [Prevotella bryantii B14]
          Length = 654

 Score =  617 bits (1592), Expect = e-174,   Method: Composition-based stats.
 Identities = 243/650 (37%), Positives = 392/650 (60%), Gaps = 19/650 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            +K+TFPDGS++ +    TG  +AESIS +LA+  V+  +NG+V +L+ P+ ++ ++E+ 
Sbjct: 1   MVKITFPDGSVREYEEGVTGLQIAESISPALARNVVSCGVNGEVVELNRPITKDAAVELY 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ--PFSSDELA 120
             ED +      H+ AH++AEA+Q ++P +Q   GP IE+GF+YD    +    S ++  
Sbjct: 61  KFEDEQGKHTFWHTSAHLLAEALQELYPGIQFGFGPAIENGFFYDVMPPKGVTISENDFP 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IE KM+E+  +D   +++ ++   A + F++  + YK E ++   A  ++T Y QG + 
Sbjct: 121 KIEAKMKELAKKDEAVVRKEIAKADALKEFKADGQDYKCEHIDLDLADGSITTYTQGNFT 180

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLC+GPH+ STG +K   K+  VAGA+WRGD+ R  ++RIYG ++  ++ L +YL  LEE
Sbjct: 181 DLCKGPHLVSTGDIK-AVKITSVAGAFWRGDAKREQMTRIYGISFPKKKMLDEYLVMLEE 239

Query: 241 SEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++KRDHRK+ +EM+LF  +   G G+  W  KG ++   L   +RR +   +Y+E+ TP 
Sbjct: 240 AKKRDHRKIGKEMELFMFSERVGKGLPIWLPKGTQLRLRLQELLRRVLKPYNYQEVITPG 299

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +  ++L+  SGHW  Y  + F       T ++   + LKPMNCP H  ++    +SY++L
Sbjct: 300 IGSKNLYITSGHWAHYGKDAFQ---PIHTPEEDEEYMLKPMNCPHHCEIYARKPRSYKDL 356

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG+V+R E SG LHGL RVR FTQDDAH+F   +Q+  E     ++I  ++  F
Sbjct: 357 PLRIAEFGTVFRYEKSGELHGLTRVRTFTQDDAHIFVRPDQVKAEFENNIDIIQKVFSIF 416

Query: 419 GFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           GF     ++S R  K     +GSD +W++++N ++          +  +      GE AF
Sbjct: 417 GFNDYEAQISLRDPKDTEKYIGSDEIWEESQNAIREACK------EKGLKAVEEEGEAAF 470

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK ++++KDAIGR WQ GTIQVD+NLP RF   Y +  + K  PVMIHRA FGS+ERF
Sbjct: 471 YGPKLDFMVKDAIGRRWQLGTIQVDYNLPERFKLEYTDVDNTKKTPVMIHRAPFGSLERF 530

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             ++IE+  G  PLWL P Q  +  I+    +YA+++   L  H +    D RNE +  K
Sbjct: 531 TAVLIEHTAGRFPLWLIPDQVAILPISEKYNDYAKKVKAYLDKHDVRGYIDDRNEKVGRK 590

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IR++ +K++P ++I G+KEA    + +R+ G      +++ +    + +E
Sbjct: 591 IRDNELKRVPYMVIVGEKEAEGGLVSMRKQGGGDQASMTMEEFAKRINEE 640


>gi|156717366|ref|NP_001096223.1| probable threonyl-tRNA synthetase 2, cytoplasmic [Xenopus
           (Silurana) tropicalis]
 gi|123909108|sp|Q0V9S0|SYTC2_XENTR RecName: Full=Probable threonyl-tRNA synthetase 2, cytoplasmic;
           AltName: Full=Threonine--tRNA ligase; Short=ThrRS;
           AltName: Full=Threonyl-tRNA synthetase-like protein 2
 gi|111307891|gb|AAI21418.1| tarsl2 protein [Xenopus (Silurana) tropicalis]
          Length = 814

 Score =  617 bits (1591), Expect = e-174,   Method: Composition-based stats.
 Identities = 238/647 (36%), Positives = 361/647 (55%), Gaps = 23/647 (3%)

Query: 2   PSDIKLTFPDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
              IK+T  DG   +      T   VA  IS+ LA   V   +N ++ DL  P+  + ++
Sbjct: 171 SKPIKITLADGKQVDGESWKTTPYQVAIGISKGLADNVVIAKVNNELWDLDRPLEQDSNV 230

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDE 118
           E++  +   + AV  HS AHI+ E +++ +    +  GP IE+GFYYD   + +  SS+E
Sbjct: 231 ELLKFDSEEAQAVYWHSSAHILGETMENFYGGC-LCYGPPIENGFYYDMYLDGRGVSSNE 289

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
              +E   + II    PF +  +S +   E+F+     +K  IL         T+YR G 
Sbjct: 290 FPSLENMCKAIIKEKQPFERLEVSKDLLLEMFKY--NKFKCRILNEKVDTPTTTVYRCGP 347

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLCRGPHVR TG++K   K+ K +  YW G ++   L RIYG ++   + + ++  F 
Sbjct: 348 LIDLCRGPHVRHTGKIKTL-KIYKNSSTYWEGRADMETLQRIYGISFPDSKLMKEWEQFQ 406

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
           EE++ RDHRK+ R+ +LF   +   G  F+  +G  I+ TL  +++ + +  ++ E+ +P
Sbjct: 407 EEAKNRDHRKIGRDQELFFFHDLSPGSCFFLPRGAHIYNTLTDFIKGEYQIRNFTEVASP 466

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  LW+ SGHW  Y  NMF+ +       +  TFALKPMNCPGH  +F H  +S+RE
Sbjct: 467 NIYNSKLWEMSGHWQHYSENMFSFEV------EKETFALKPMNCPGHCLMFGHRPRSWRE 520

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R A+FG ++RNE SG+L GL RVR F QDDAH+FCT +Q+  E       + S+YK 
Sbjct: 521 LPLRFADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCTMDQIQEEMNGCLQFLQSVYKV 580

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF   +  LSTRPE  +G   +W++AE  ++  L+      +      +  G+GAFYGP
Sbjct: 581 FGFTFQLH-LSTRPENYLGEIEIWNEAEKQLESSLNQFGEPWK------LNPGDGAFYGP 633

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIG 536
           K +  +KDAIGR  QC TIQ+DF LP RFN  YV+    +K  PV+IHRA+ GS+ER I 
Sbjct: 634 KIDIKIKDAIGRYHQCATIQLDFQLPIRFNLTYVSKDGDDKKRPVIIHRAILGSVERMIA 693

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FRNETINYKI 595
           I+ EN+ G  P WLSP Q +V  +  S  EYAQ++   +       E D   + T+N KI
Sbjct: 694 ILCENYGGKWPFWLSPRQVMVIPVGPSCDEYAQQVCKDVFEAGFMAEVDLDHSCTLNKKI 753

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           R   + +   I++ G+KE ++ ++ +R   +    ++ L  AI  L 
Sbjct: 754 RNAQLAQCNFILVVGEKEKTDSAVNVRTRDNKVHGEILLTSAIEKLK 800


>gi|284919690|emb|CAX65467.1| hypothetical protein [Enterobacter hormaechei]
          Length = 662

 Score =  617 bits (1590), Expect = e-174,   Method: Composition-based stats.
 Identities = 302/651 (46%), Positives = 421/651 (64%), Gaps = 14/651 (2%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIE 60
              +  T PDGS+K+    AT  +VAESI  S++K AV   I+GK  DL +  +  G + 
Sbjct: 21  SEPLTFTLPDGSLKHVRKGATLQNVAESIGSSVSKSAVYAEIDGKCVDLLEKAKNSGKLN 80

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           IIT  D  +L  IR  C  ++A +V+ ++P  ++  G + ++GFYYDF  ++PF+ D+L 
Sbjct: 81  IITVFDEEALGPIRRGCLLLLAASVKQLFPSARMVEGQLTKEGFYYDFAVDKPFTRDDLG 140

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IE+ M  +IA + P +K+ ++  +A + FE + E +K   L  I A ++VTL    ++ 
Sbjct: 141 MIEQHMTSLIAENPPIIKEQVTRAQAIDCFEQRGEKFKSTELMEILADKSVTLCHLRQFT 200

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           D   GP V     +K   KL+ V+GAYWRG++N   L RIYGTAW ++++L  +L    E
Sbjct: 201 DGFNGPLVPDLRFLKN-MKLLNVSGAYWRGEANNVQLQRIYGTAWASKKQLDGWLEKTAE 259

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQV 299
           +EKRDHRKL RE+DLFH  ++  G +FWH +GW IFQ+LI+YMR R     Y E+NTP V
Sbjct: 260 AEKRDHRKLGRELDLFHFQDNAPGAVFWHPRGWTIFQSLIAYMRSRHEVAGYVEVNTPDV 319

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           +D+ LW+ SGHWD+YR +MF  +      +D R FALKPMNCPG V++F +G+KSYR+LP
Sbjct: 320 MDRSLWEISGHWDNYRDHMFTTQ-----TEDGRNFALKPMNCPGAVSLFKYGIKSYRDLP 374

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           VRL+EFG V+R EPSGSLHGL+RVR FTQDDAH+FCT +Q+  EC  I  L++ IYK FG
Sbjct: 375 VRLSEFGKVHRYEPSGSLHGLLRVRHFTQDDAHIFCTLQQVEGECKSILQLVLDIYKQFG 434

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           FE++ +KLSTRPEKR+GSDA WD  EN +   L+         +   V  GEGAFYGPK 
Sbjct: 435 FEEVAIKLSTRPEKRMGSDADWDRLENALSASLEA------QGLQWSVNPGEGAFYGPKL 488

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           E++L+DAIGRDWQCGT+QVD NLP RF+  Y+        PVM+HRA+FGS+ERF GI++
Sbjct: 489 EFVLRDAIGRDWQCGTLQVDMNLPERFDIGYIAEDGSTKRPVMLHRALFGSLERFTGILL 548

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E++ G LP WLSP+QA+V TIT     YA+++   L+   L  E D RNE I +KIRE +
Sbjct: 549 EHYVGKLPAWLSPVQAVVMTITDKQHHYAEQVLKALRKKGLRCEADLRNEKIGFKIREQT 608

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDC 650
           + +IP ++I GD E +   + +R         + L +A   +     PP+ 
Sbjct: 609 LARIPFLLIVGDAEENAARVTVRDRTGRCMGTLLLNEAADAIKICCQPPEV 659


>gi|82524022|emb|CAI78700.1| Threonyl-tRNA synthetase [uncultured Flavobacteriaceae bacterium]
          Length = 644

 Score =  617 bits (1590), Expect = e-174,   Method: Composition-based stats.
 Identities = 258/649 (39%), Positives = 385/649 (59%), Gaps = 21/649 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            I +T PDGS+K F  +AT  DVA+SIS   A+  ++ + NG   +   P+   GS+ + 
Sbjct: 1   MIHITLPDGSVKPFEKNATPMDVAKSISEGFARNVISASFNGTTIETVTPLTANGSLVLY 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
           T  +        HS AH++A+A++ ++P +++ IGP IE+GFYYD D  E   S  +   
Sbjct: 61  TWNNDEGKKAFWHSSAHVLAQALEELYPGIKLTIGPAIENGFYYDVDFGEHTVSEKDFKT 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE K+ EI      F  + +S ++A  L++     +K E++E++     +T      + D
Sbjct: 121 IEDKIIEIARGKHTFKMRAVSKKEALSLYK--DNTFKTELIENL-EDGTITFCDHSTFTD 177

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG H+  TG +K   K++ VAGAYWRG+   P L+R+YG ++  Q+ELT YL  LEE+
Sbjct: 178 LCRGGHIPDTGIIK-AVKILSVAGAYWRGNEKNPQLTRVYGISFPKQKELTDYLNLLEEA 236

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           +KRDHRKL +E++LF  ++    G+  W  KG  + + L  ++++ + K  YE + TP +
Sbjct: 237 KKRDHRKLGKELELFAFSKKVGQGLPLWLPKGAALRERLEDFLKKAQKKAGYEMVVTPHI 296

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             + L+  SGH+  Y A+ F       T K+   F LKPMNCP H  ++N+   SY++LP
Sbjct: 297 GQKELYVTSGHYAKYGADSFQ---PIKTPKEDEEFLLKPMNCPHHCEIYNNSQWSYKDLP 353

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
            R AEFG+VYR E SG LHGL RVRGFTQDDAH+FC  EQ+  E   + +L++ ++   G
Sbjct: 354 KRYAEFGTVYRYEQSGELHGLTRVRGFTQDDAHLFCMPEQLDQEFKNVIDLVLYVFGSLG 413

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           FE    ++S R  +     +G    W+ AE  +      I  +    ++  ++ GE AFY
Sbjct: 414 FENFTAQVSVRDPENPDKYIGEVENWEKAEQAI------INAAKDKGLDFVIVEGEAAFY 467

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDA+GR WQ GTIQVD+NLP RF+  Y  S +E   PVMIHRA FGSIERFI
Sbjct: 468 GPKLDFMVKDALGRKWQLGTIQVDYNLPERFDLTYKGSDNELHRPVMIHRAPFGSIERFI 527

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            I++E+  GN PLWL P QAI+  I+    +YA+++ NLL+++ +    D RNETI  KI
Sbjct: 528 AILLEHTAGNFPLWLMPKQAIILCISEKYEKYAEKVLNLLENNEIRALVDNRNETIGKKI 587

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           RE  ++K P +II G+ E SE  I +R+ G      +S+     ++  E
Sbjct: 588 REAEMQKYPYMIIIGENEESENKISVRQHGGEDLGLISIETFSEVIKSE 636


>gi|323698513|ref|ZP_08110425.1| threonyl-tRNA synthetase [Desulfovibrio sp. ND132]
 gi|323458445|gb|EGB14310.1| threonyl-tRNA synthetase [Desulfovibrio desulfuricans ND132]
          Length = 645

 Score =  617 bits (1590), Expect = e-174,   Method: Composition-based stats.
 Identities = 273/653 (41%), Positives = 397/653 (60%), Gaps = 25/653 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAES-ISRSLAKKAVAVAINGKVCDLSDPVREG-- 57
           M  +I      G        A+ +D  +  +S+   K  VAV     + DLS PV E   
Sbjct: 1   MQVEIS-----GKQVEVADGASCADALKEGLSKKQFKNVVAVKCGDAILDLSTPVTETCT 55

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSD 117
           +IE +  +    L +IRHS AH+MAEAV+ ++P  +V IGP I DGFYYDFD E+PF+ +
Sbjct: 56  TIEPVFADSEEGLKIIRHSAAHVMAEAVKKLFPTAKVTIGPAITDGFYYDFDYERPFTPE 115

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +L  IEK+M   +  D PF++  +S  +A+++FE+K E YK EI++ +   E  ++Y  G
Sbjct: 116 DLEAIEKEMLSSVGADKPFVRTVMSKAEAKKMFEAKGETYKSEIMDDLGGDE-FSIYTHG 174

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           ++ DLCRGPHV  TGQ+K F KL+ VAGAYWRGD     L RIYGTAW   + L QYL  
Sbjct: 175 DFADLCRGPHVARTGQIKAF-KLLSVAGAYWRGDEKNKQLQRIYGTAWEDPKALKQYLNR 233

Query: 238 LEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEIN 295
           LEE++KRDHRKL +++DLF  +++ G G+  WH +G  +   L  + R   +K  Y+ + 
Sbjct: 234 LEEAKKRDHRKLGKQLDLFSFSDEVGPGMSLWHPRGMLLRAILEDFERKEHLKRGYDLVQ 293

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
            P +L + LW++SGH+D+YR NM+       T  D + + +KPMNC  H+ ++   + SY
Sbjct: 294 GPIILKRELWEKSGHYDNYRENMYF------TEIDEQAYGIKPMNCLAHMIIYKRKIMSY 347

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           R+LP R  E G V+R+E SG LHGLMRVR FTQDDAH+ C  +Q+  E L +      IY
Sbjct: 348 RDLPQRYFELGVVHRHEKSGVLHGLMRVRTFTQDDAHLICRPDQVEEEILNLIKFYKDIY 407

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
             F +E   V+LSTRP K +G+D  W+ A   ++  LD      +  +   +  G+GAFY
Sbjct: 408 ALFNYE-FDVELSTRPAKSIGTDEDWELATEGLRQALD------KSGMPYAINEGDGAFY 460

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++ L+D+IGR WQCGTIQVDF LP RF+  YV    E+  PVMIHRA+ GSIERFI
Sbjct: 461 GPKIDFHLRDSIGRSWQCGTIQVDFTLPERFDIVYVGEDGERHRPVMIHRAMLGSIERFI 520

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
           G++ E+  G  P+WL+P+QA +  +T + +++ ++    L S  + +E D RNE + YKI
Sbjct: 521 GVLTEHCAGAYPVWLAPVQARLLNVTDAQLDFMKKAEAFLVSKGIRVEADTRNEKLGYKI 580

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
           RE  ++K+P +++ GDKE     + IR         V+L +A  ++ + +  P
Sbjct: 581 REAQVEKVPYMLVIGDKEVEAGCVNIRSRDGEDPGMVTLEEAAQLILEAAKAP 633


>gi|226355500|ref|YP_002785240.1| threonyl-tRNA synthetase [Deinococcus deserti VCD115]
 gi|259516378|sp|C1D0W2|SYT_DEIDV RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|226317490|gb|ACO45486.1| putative threonine--tRNA ligase (threonyl-tRNA synthetase)
           [Deinococcus deserti VCD115]
          Length = 649

 Score =  616 bits (1589), Expect = e-174,   Method: Composition-based stats.
 Identities = 256/656 (39%), Positives = 393/656 (59%), Gaps = 30/656 (4%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           + +  PDG     P+ AT  D A +I   LA+ A+A   NG++ DL  P+ +G SI +IT
Sbjct: 1   MHVVLPDGKQLELPMGATALDAASAIGPRLAQDALAATANGELVDLMTPLPDGASITLIT 60

Query: 64  PEDP-RSLAVIRHSCAHIMAEAVQSIW-------PEVQVAIGPIIEDGFYYDFDKEQPFS 115
            ++P  +  + RHS  H+M++AV   +         ++  +GP IE+G+Y DFD  +P  
Sbjct: 61  KKNPGDAAPLFRHSLGHVMSQAVGEYYRAKGYSDDRIKRGVGPSIENGWYQDFDLPEPLR 120

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            ++L +IEK M+EI++R+  F ++ +S   A  L +   + YK E+++ +P  E +T Y+
Sbjct: 121 EEDLPEIEKIMREILSRNLAFRRREVSK--AEGLAQFPHDPYKQELIQGLPDDEPITFYQ 178

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
           QG++ DLCRGPH  STG++   FKLM  +GAYWRG+   P+L R+YG A+ +Q+EL +YL
Sbjct: 179 QGDYVDLCRGPHFPSTGRLPGAFKLMSTSGAYWRGNEKNPILQRVYGVAFASQKELDEYL 238

Query: 236 YFLEESEKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEE 293
           + LEE+++RDHRKL RE++LF I    G G+  W   G  + + L  +++ +  +  Y+ 
Sbjct: 239 HQLEEAKRRDHRKLGRELELFTIDPLVGKGLPLWLPNGTVLREELAGFLKEQQFRRGYQG 298

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           + TP + +  L++ SGH+  Y    F     DD       + LKPMNCP HV ++    +
Sbjct: 299 VITPNIGNLELYKTSGHYPYYADGQFNPIEVDD-----EQYMLKPMNCPHHVRIYASKPR 353

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYR+LPVRLAEFG+VYR E SG L+GL RVRGFTQDDAH+FC  +Q+  E L + +L + 
Sbjct: 354 SYRDLPVRLAEFGTVYRYEQSGELNGLTRVRGFTQDDAHLFCRPDQLKKEFLDVLDLTVL 413

Query: 414 IYKDFGFEKIMVKLSTRPEK---RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
           + K FG   +  ++ TR  +    VG +A W+ AE  +   +D +       +   +  G
Sbjct: 414 VLKTFGMNDVRFRVGTRDPESDKYVGDEANWELAERQILEAVDEVG------LPYTIEPG 467

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           + AFYGPK ++++KD +GR+WQ GTIQVD+NLP RF+  YV    +   P+MIHRA FGS
Sbjct: 468 DAAFYGPKLDFVVKDVLGREWQLGTIQVDYNLPERFDISYVGEDGQDHRPIMIHRAPFGS 527

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
           +ERF+GI+IE++ G+ PLWL+P Q ++  I     EYA+E+ + L +  L  E D  +  
Sbjct: 528 LERFVGILIEHYAGDFPLWLAPRQVMIIPIADRHNEYAEELRSELHAAGLRAEVDDSSNR 587

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRF---GSTTTQKVSLLDAIPILTK 643
           +  K+R   + KIP+++I GDKE   R + +R     G    + V+  D    L +
Sbjct: 588 MQAKVRTAELSKIPVMLIVGDKEQEARQVSVRERSVEGHKERKGVAFDDLCAELLE 643


>gi|326533164|dbj|BAJ93554.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 711

 Score =  616 bits (1589), Expect = e-174,   Method: Composition-based stats.
 Identities = 231/649 (35%), Positives = 367/649 (56%), Gaps = 24/649 (3%)

Query: 3   SDIKLTFPDGSIKNFPVH-ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIE 60
             I++T PDG+IK      +T  D+A  IS  LA   +   +NG + D++ P+  +  ++
Sbjct: 75  DPIRVTLPDGAIKEGKKWISTPMDIATGISTGLAASCLIAQVNGVLWDMTRPLEGDCDLK 134

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII--EDGFYYDFD-KEQPFSSD 117
           +   +         HS AHI+ E+++ ++   ++ IGP     +GFYYD   K+   +  
Sbjct: 135 LFKFDSNEGRDTFWHSSAHILGESLERVY-GCKLCIGPCTTRGEGFYYDAHYKDLTLNDT 193

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
               I+K+ ++ +A   PF +  +S  +A E+F      +KVEI+  +P  + +T+YR G
Sbjct: 194 HFGLIDKQAKKAVAEKQPFERIEVSRAEALEIFAE--NEFKVEIINELPEDKTITVYRCG 251

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
              DLCRGPH+ +T  VK F   +K + +YWRG ++R  L R+YG ++   + L +YL+ 
Sbjct: 252 PLVDLCRGPHIPNTSFVKAF-ACLKASASYWRGKADRESLQRVYGISFPDSKRLKEYLHM 310

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
           +EE++KRDHR L +  +LF       G  F+   G  I+  L+ ++R++ ++  Y E+ +
Sbjct: 311 IEEAKKRDHRLLGQSQELFFFHPLSPGSCFFLPNGAIIYNKLMDFLRKEYRERGYREVLS 370

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P + +  LW+ SGH  +Y+ NMF  +       + + F LKPMNCPGH  +F H ++SYR
Sbjct: 371 PNIYNMQLWETSGHAANYKDNMFVFEI------EKQEFGLKPMNCPGHCLMFGHKVRSYR 424

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ELP+R+A+FG ++RNE SG+L GL RVR F QDDAH+FCT+ Q+ +E       I  +YK
Sbjct: 425 ELPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCTESQIKDEVGACLEFIDYVYK 484

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
            FGF+  + +LSTRPEK +G    W+ AE  +   L+      +      +   +GAFYG
Sbjct: 485 IFGFQYEL-ELSTRPEKYLGDIETWNKAEQQLTEALNEFGKPWK------INEADGAFYG 537

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK-CHPVMIHRAVFGSIERFI 535
           PK +  + DA+ R +QC T+Q+DF LP RF   Y      K   PVMIHRA+ GS+ER  
Sbjct: 538 PKIDIGVFDALKRKFQCATLQLDFQLPLRFKLTYSAEDEAKLERPVMIHRAILGSVERMF 597

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            I++E++ G  PLWLSP QAIV  ++S+++ YA+E+   + +    ++ D  + TI  K+
Sbjct: 598 AILLEHYNGKWPLWLSPRQAIVCCVSSNSLAYAKEVHAQIHAAGFHVDIDMTDRTIQKKV 657

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           RE  + +   I++ G KEA    + +R          S+ D I   + E
Sbjct: 658 REAQLAQFNYILVVGAKEAESGKVVLRVRDKADLSTESIADVIARFSDE 706


>gi|296089916|emb|CBI39735.3| unnamed protein product [Vitis vinifera]
          Length = 686

 Score =  616 bits (1588), Expect = e-174,   Method: Composition-based stats.
 Identities = 228/650 (35%), Positives = 368/650 (56%), Gaps = 24/650 (3%)

Query: 3   SDIKLTFPDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIE 60
             IK+T PDG++K       T  D+A+ IS+ LA  A+   +NG + D+S  +  +  ++
Sbjct: 50  DPIKITLPDGTVKEGKKWETTPFDIAKEISKGLASNALISQVNGVLWDMSRALEGDCGLK 109

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII--EDGFYYD-FDKEQPFSSD 117
           + T +         HS AHI+ +A++  +   ++ IGP     +GFYYD F  E   + D
Sbjct: 110 LFTFDSDEGRDTFWHSSAHILGQALEMEY-GCKLCIGPCTTRGEGFYYDAFYGELGLNED 168

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
              QIE  + + +    PF +  +S  +A E+F     ++K+EI+  +P  + +T+YR G
Sbjct: 169 HFKQIESGVLKAVGEKQPFERIEVSRNQALEMFSE--NSFKIEIINDLPEDKTITVYRCG 226

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
              DLCRGPH+ +T  VK F   +K + AYWRG+ +R  L R+YG ++   + L +Y+  
Sbjct: 227 PLVDLCRGPHIPNTSFVKAF-ACLKASSAYWRGNRDRESLQRVYGISYPDSKRLKEYIAR 285

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
           +EE++K DHR L  + +LF       G  F+   G +I+  L+ +++ + ++  Y E+ +
Sbjct: 286 IEEAKKYDHRLLGVKQELFFCHPLSPGSWFFLPHGGRIYNKLMEFIKAQYRERGYHEVFS 345

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P + +  LW+ SGH  +Y+ NMF  +       + + F LKPMNCPGH  +F H ++SYR
Sbjct: 346 PTMYNMQLWETSGHAANYKENMFVFEV------EKQEFGLKPMNCPGHCLMFEHRVRSYR 399

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ELP+RLA+FG ++RNE SG+L GL RVR F QDDAH+FC + Q+ +E + + + I   Y 
Sbjct: 400 ELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVMGVLDFINYAYN 459

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
            FGF   + KLSTRPEK +G    W+ AE  +   L+      +      +  G+GAFYG
Sbjct: 460 IFGFTYEL-KLSTRPEKYLGDLETWEKAEAALTEALNQSGKPWE------INEGDGAFYG 512

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFI 535
           PK +  + DA+ R +QC T+Q+DF LPSRF+  Y      ++  PVMIHRA+ GS+ER  
Sbjct: 513 PKIDISVSDALNRKFQCATLQLDFQLPSRFDLSYSAEDEAKRERPVMIHRAILGSVERMF 572

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            I++E++KG  P WLSP QAIV  ++  +  YA ++ + +      ++ D  +  I  K+
Sbjct: 573 AILLEHYKGKWPFWLSPRQAIVCPVSEKSQPYALQVRDQIHQAGYYVDVDTTDRKIQKKV 632

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           RE  + +   I++ G++EA+ R + +R         +S+ + +     E+
Sbjct: 633 REAQLAQYNFILVVGEEEANTRQVSVRVRDKGDHSVMSMENLLSYFKSET 682


>gi|24213940|ref|NP_711421.1| threonyl-tRNA synthetase [Leptospira interrogans serovar Lai str.
           56601]
 gi|59798590|sp|Q8F6R1|SYT_LEPIN RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|24194795|gb|AAN48439.1|AE011305_9 threonyl-tRNA synthetase [Leptospira interrogans serovar Lai str.
           56601]
          Length = 638

 Score =  616 bits (1587), Expect = e-174,   Method: Composition-based stats.
 Identities = 279/646 (43%), Positives = 408/646 (63%), Gaps = 21/646 (3%)

Query: 6   KLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGK-VCDLSDPVREGS-IEIIT 63
           +LT PD SIK      T  D  E     L  KA+AV +NG+ + DLS  V + S IE++T
Sbjct: 3   QLTLPDKSIKEVASGFTYRDFIEKELPFLKNKALAVRLNGEEILDLSRTVEKNSNIEVLT 62

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG---FYYDFDKEQPF-SSDEL 119
             +       +HS AH++  AVQ+++    + +GP+I++G   FYYD D +    + ++ 
Sbjct: 63  YSEKLGWETFQHSAAHLLGMAVQNLYKNANLTVGPVIDNGPGFFYYDIDFQGAIVTPEDF 122

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IE +M++I+  D P  ++ +S ++A E F+   E YK+EI++ IP++E V++Y  GEW
Sbjct: 123 PKIEAEMEKIVKADHPVWRKVVSKKQAIETFQKLGEKYKIEIIDGIPSEE-VSIYGMGEW 181

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPHV ++G +K F KL  ++GAYW+ D N  ML+RIYG A+ T++EL QYL+ +E
Sbjct: 182 FDLCRGPHVPNSGILKSF-KLTAISGAYWKADKNNSMLTRIYGVAFPTKKELDQYLFQIE 240

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E++KRDHRK+ +EMDLF   ++G G  FWH KG  ++ +L  Y+R +     Y+EI TP 
Sbjct: 241 EAKKRDHRKIGKEMDLFSFQKEGPGFPFWHPKGTILWNSLAEYLRSECNKRGYQEIKTPA 300

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           VL   LW++SGHWD++  NM+       T  D   +ALKPMNCPG   ++ H L SYREL
Sbjct: 301 VLSSELWKKSGHWDNFHENMYF------TDIDEEDYALKPMNCPGCSLIYKHHLHSYREL 354

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R AEFGSV+R+E  G LHGL RVR FTQDD+H++   + + +E + I +   ++YK F
Sbjct: 355 PLRFAEFGSVHRHELHGVLHGLFRVRAFTQDDSHIYAPLDYLESEVMDIIDFTFTVYKKF 414

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF +    ++TRPEK  G D  W+ A + +K  L+      +  I  G+  GEGAFYGPK
Sbjct: 415 GFSEFKTFIATRPEKSQGKDEDWEFATSTLKQSLE------KKGIPYGIKEGEGAFYGPK 468

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ +KD+IGR WQCGTIQVDF++P RF+  Y +S  +K  PVMIHRA++GS+ERFIGI+
Sbjct: 469 IEFNIKDSIGRLWQCGTIQVDFSMPERFDLDYTDSDGQKKRPVMIHRAIYGSLERFIGIL 528

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+++G  PLW+SP Q  + T+T    +YA+ +   L      +E D RNE I  KIR+ 
Sbjct: 529 IEHYEGKFPLWISPNQIRILTVTEKVTDYAKNVYRELLDSGFRVELDTRNEKIGAKIRDS 588

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            +KK   ++I G+KE    ++ +R  G   T+ ++    I  L  E
Sbjct: 589 ILKKANYLLILGEKEMESNTLAVRMRGQEDTKILTRTGFISNLQDE 634


>gi|45658307|ref|YP_002393.1| threonyl-tRNA synthetase [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|59798553|sp|Q72PK6|SYT_LEPIC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|45601549|gb|AAS71030.1| threonyl-tRNA synthetase [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 638

 Score =  616 bits (1587), Expect = e-174,   Method: Composition-based stats.
 Identities = 279/646 (43%), Positives = 408/646 (63%), Gaps = 21/646 (3%)

Query: 6   KLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGK-VCDLSDPVREGS-IEIIT 63
           +LT PD SIK      T  D  E     L  KA+AV +NG+ + DLS  V + S IE++T
Sbjct: 3   QLTLPDKSIKEVASGFTYRDFIEKELPFLKNKALAVRLNGEEILDLSRTVEKNSNIEVLT 62

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG---FYYDFDKEQPF-SSDEL 119
             +       +HS AH++  AVQ+++    + +GP+I++G   FYYD D +    + ++ 
Sbjct: 63  YSEKLGWETFQHSAAHLLGMAVQNLYKNANLTVGPVIDNGPGFFYYDIDFQGAIVTPEDF 122

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IE +M++I+  D P  ++ +S ++A E F+   E YK+EI++ IP++E V++Y  GEW
Sbjct: 123 PKIEAEMEKIVKADHPVWRKVVSKKQAIETFQKLGEKYKIEIIDGIPSEE-VSIYGMGEW 181

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPHV ++G +K F KL  ++GAYW+ D N  ML+RIYG A+ T++EL QYL+ +E
Sbjct: 182 FDLCRGPHVPNSGVLKSF-KLTAISGAYWKADKNNSMLTRIYGVAFPTKKELDQYLFQIE 240

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E++KRDHRK+ +EMDLF   ++G G  FWH KG  ++ +L  Y+R +     Y+EI TP 
Sbjct: 241 EAKKRDHRKIGKEMDLFSFQKEGPGFPFWHPKGTILWNSLAEYLRSECNKRGYQEIKTPA 300

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           VL   LW++SGHWD++  NM+       T  D   +ALKPMNCPG   ++ H L SYREL
Sbjct: 301 VLSSELWKKSGHWDNFHENMYF------TDIDEEDYALKPMNCPGCSLIYKHHLHSYREL 354

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R AEFGSV+R+E  G LHGL RVR FTQDD+H++   + + +E + I +   ++YK F
Sbjct: 355 PLRFAEFGSVHRHELHGVLHGLFRVRAFTQDDSHIYAPLDYLESEVMDIIDFTFTVYKKF 414

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF +    ++TRPEK  G D  W+ A + +K  L+      +  I  G+  GEGAFYGPK
Sbjct: 415 GFSEFKTFIATRPEKSQGKDEDWEFATSTLKQSLE------KKGIPYGIKEGEGAFYGPK 468

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ +KD+IGR WQCGTIQVDF++P RF+  Y +S  +K  PVMIHRA++GS+ERFIGI+
Sbjct: 469 IEFNIKDSIGRLWQCGTIQVDFSMPERFDLDYTDSDGQKKRPVMIHRAIYGSLERFIGIL 528

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+++G  PLW+SP Q  + T+T    +YA+ +   L      +E D RNE I  KIR+ 
Sbjct: 529 IEHYEGKFPLWISPNQIRILTVTEKVTDYAKNVYRELLDSGFRVELDTRNEKIGAKIRDS 588

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            +KK   ++I G+KE    ++ +R  G   T+ ++    I  L  E
Sbjct: 589 ILKKANYLLILGEKEMESNTLAVRMRGQEDTKILTRTGFISNLQDE 634


>gi|289523104|ref|ZP_06439958.1| threonine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
 gi|289503647|gb|EFD24811.1| threonine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
          Length = 624

 Score =  616 bits (1587), Expect = e-174,   Method: Composition-based stats.
 Identities = 264/637 (41%), Positives = 403/637 (63%), Gaps = 21/637 (3%)

Query: 13  SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPEDPRSLA 71
           S+  +P  A+  ++ +   R +  K +AV I+GK+CDL   V E  +IE +  + P  + 
Sbjct: 2   SVNEYPKKAS--EIIKE--RGIDGKVIAVKIDGKLCDLDTTVEENANIEPVEIDSPEGIE 57

Query: 72  VIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIA 131
           ++RHS +H+MA+AV  ++   +  +GP IE+GFYYD D     + D+L +IE++M++I A
Sbjct: 58  ILRHSTSHLMAQAVYRLYHGTKYGVGPAIENGFYYDMDVPTTITEDDLPKIEEEMKKIAA 117

Query: 132 RDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRST 191
              PF +  +S ++A  +F+ + + YK+E+++ I   + ++LY+ GE+ DLCRGPHV +T
Sbjct: 118 EAIPFERLIVSKDEAIGIFKERGDTYKLELIDGI-EDDTLSLYKVGEFIDLCRGPHVPNT 176

Query: 192 GQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAR 251
             +K F KL+ VAGAYWRGD   PML+RIYGTA+ T+++L  YL  +EE+++RDHR+L +
Sbjct: 177 SYLKHF-KLLSVAGAYWRGDERNPMLTRIYGTAFPTEEDLLAYLAKVEEAKRRDHRRLGK 235

Query: 252 EMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGH 310
           E+D+F +  +  G  F+H KG  +   L+ + R+  ++  Y+EI TP +LDQ LW +SGH
Sbjct: 236 ELDIFSMQSEAPGFPFFHPKGVVVLNVLVDFWRKVHVQRGYQEIKTPLILDQDLWIRSGH 295

Query: 311 WDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYR 370
           WD YR NM+  +       D + FA+KPMNCPG + V+   L+SYR+ P++LAE G V+R
Sbjct: 296 WDHYRENMYFTEI------DGKPFAIKPMNCPGGILVYKSQLRSYRDFPLKLAELGVVHR 349

Query: 371 NEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR 430
           +E SG LHGLMRVR FTQDDAH+F T++ +  E + I N++  IY  FGF    V+LSTR
Sbjct: 350 HERSGVLHGLMRVRCFTQDDAHIFTTEDHIKEEIIDIMNIVKYIYGVFGFPYH-VELSTR 408

Query: 431 PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRD 490
           PE  +G  ALWD AE  ++  LD         +   +  G+GAFYGPK ++ L+D IGR 
Sbjct: 409 PENAMGEKALWDRAEQALQEALDD------QGVEYKLNPGDGAFYGPKIDFHLEDCIGRT 462

Query: 491 WQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL 550
           WQCGTIQ+DF +P +F+  Y+    E   PVMIHR V GS+ERF+GI+IE + G  P WL
Sbjct: 463 WQCGTIQLDFQMPEKFDITYIGPDGEPHRPVMIHRTVLGSLERFLGILIEQYAGAFPYWL 522

Query: 551 SPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           +P+Q  +  ++   + YA+ +A+LL+   + +E D +  T+  KIR+  ++K P +II G
Sbjct: 523 APVQVKILPVSDEHLTYAKNVASLLQKQDVRVEVDRKEGTLGKKIRDAQMQKTPYMIIIG 582

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLP 647
           ++E     + +R         +SL     +L+ E  P
Sbjct: 583 NREVENEVVSVRDRSKGDLGSMSLEALKELLSNEYYP 619


>gi|254569696|ref|XP_002491958.1| Threonyl-tRNA synthetase, essential cytoplasmic protein [Pichia
           pastoris GS115]
 gi|238031755|emb|CAY69678.1| Threonyl-tRNA synthetase, essential cytoplasmic protein [Pichia
           pastoris GS115]
 gi|328351547|emb|CCA37946.1| threonyl-tRNA synthetase [Pichia pastoris CBS 7435]
          Length = 712

 Score =  615 bits (1586), Expect = e-174,   Method: Composition-based stats.
 Identities = 242/654 (37%), Positives = 365/654 (55%), Gaps = 30/654 (4%)

Query: 3   SDIKLTFPDGSIKN-FPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIE 60
           S IK+T  DG++K       +  ++A+SI +S  ++ V   +NG++ DL  P+  +  +E
Sbjct: 65  SPIKITLKDGTVKEGVAWETSPFEIAKSIGKSFLERQVISKVNGELWDLERPLEADSQLE 124

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF---DKEQPFSSD 117
               E P    V  HS AH++ EA +  +    + IGP  EDGF+Y+    + E   +  
Sbjct: 125 FFDFETPEGKRVFWHSSAHVLGEACECHY-GAHLCIGPPTEDGFFYEMSIDNGESFVTQA 183

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQ 176
           +   IE   +  I     F +  LS E   ++       YKV I+ E IP     T+YR 
Sbjct: 184 DFPSIEAVAKSAIKEKQKFERLVLSKEDLLKM--FAYNKYKVRIISEKIPDGTASTVYRC 241

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           G   DLC GPH+  TG++K   K++K + +Y+ GD+N   L R+YG ++  ++++ ++L 
Sbjct: 242 GPLIDLCVGPHIPHTGRIK-AIKVLKNSSSYFFGDANNDSLQRVYGISFPDKKQMDEHLK 300

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEIN 295
           FL+E+ +RDHR++ RE +LF+  E   G  FW   G +I+ TL   +R + +   YEE+ 
Sbjct: 301 FLKEAAERDHRRIGREQELFYFNEMSPGSCFWLPHGTRIYNTLTDLLRTEYRKRGYEEVI 360

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP + +  LW+ SGHW +Y+ NMF  +       +  TF LKPMNCPGH  +F    +SY
Sbjct: 361 TPNMYNSKLWETSGHWANYKENMFTFEV------EKETFGLKPMNCPGHCLMFKSRERSY 414

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP R+A+FG ++RNE SG+L GL RVR F QDDAH+FCT++Q+ +E   I + +  IY
Sbjct: 415 RELPWRVADFGVIHRNEFSGALSGLTRVRRFQQDDAHIFCTQDQIEDEISNIFDFLKFIY 474

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
             FGFE  M +LSTRPEK VG    W++AE  ++  L+      +      V  G+GAFY
Sbjct: 475 GLFGFEFKM-ELSTRPEKFVGDIETWNNAEAKLENALN------KWGGKWEVNPGDGAFY 527

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK--CHPVMIHRAVFGSIER 533
           GPK + ++ DA+ R  QC T+Q+DF LP RF   Y     +     PVMIHRA+ GS+ER
Sbjct: 528 GPKIDIMISDALKRWHQCATVQLDFQLPQRFELEYRTKDGQDDLTRPVMIHRAILGSVER 587

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
              I+ E+F G  P WLSP Q ++  +     +YAQ++   LK   L  + D    T+  
Sbjct: 588 MTAILTEHFAGKWPFWLSPRQVLIVPVGVKYFDYAQQVQQELKGLDLYADVDLSGNTLQK 647

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK----VSLLDAIPILTK 643
           KIR   +++   I I G++E +++S+ +R       Q     V L+D IP L +
Sbjct: 648 KIRTGQLQRYNFIFIVGEQEQNDKSVNVRNRDIQELQNKNEAVPLVDVIPKLLQ 701


>gi|332701961|ref|ZP_08422049.1| threonyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay]
 gi|332552110|gb|EGJ49154.1| threonyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay]
          Length = 655

 Score =  615 bits (1586), Expect = e-174,   Method: Composition-based stats.
 Identities = 255/642 (39%), Positives = 393/642 (61%), Gaps = 20/642 (3%)

Query: 12  GSIKNFPVHATGSD-VAESISRSLAKKAVAVAINGKVCDLSDPV-REGS-IEIITPEDPR 68
           G         +  + +++ +S+   K+ +A   NG+  DLS  V  + + +E +  + P 
Sbjct: 7   GQQIEVQSGVSVGEALSQVVSKKKLKEVLAAKCNGQTLDLSRTVPTDCAALEPVFEDSPE 66

Query: 69  SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQE 128
            L +IRHS AH+MAEAV+ ++P  +V IGP I  GFYYDF+ E+ F+ ++L +IE++M  
Sbjct: 67  GLDIIRHSAAHLMAEAVKKLFPTAKVTIGPAIASGFYYDFEFERTFTPEDLEKIEQEMLR 126

Query: 129 IIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           +  +D PF  + L  ++A++LF S  E YK+EI+E + A + V+LY  G + DLCRGPHV
Sbjct: 127 LAGKDEPFECRVLPADEAKDLFASMGEPYKIEIIEDLGA-QTVSLYTNGSFVDLCRGPHV 185

Query: 189 RSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRK 248
            S+G++K F KLM VAGAYWRGD  R  L RIYGTA+ + ++L ++L  +EE++KRDHRK
Sbjct: 186 PSSGRIKAF-KLMSVAGAYWRGDEKRQQLQRIYGTAFASPKDLKKHLERIEEAKKRDHRK 244

Query: 249 LAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQ 306
           L  ++DLF   ++   G++ WH KG  I   +  + R   ++  Y  +  PQ+L + LW+
Sbjct: 245 LGTQLDLFSFCDEAGAGMVIWHPKGALIRTIIEDFERKEHLRRGYHIVQGPQLLKRELWE 304

Query: 307 QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFG 366
           +SGH++ YR NM+       T  D + + +KPMNC  H+ ++   ++SYR+LP+RL E G
Sbjct: 305 RSGHYEHYRQNMYF------TEIDEQAYGVKPMNCLSHMLIYKSKVRSYRDLPLRLFELG 358

Query: 367 SVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK 426
            V+R+E SG LHGL+RVR FTQDDAH+ C  +Q+ +E + + + +  +   FGF     +
Sbjct: 359 VVHRHEKSGVLHGLLRVRQFTQDDAHIICRPDQLEDEIIGVVHFVRDVMGIFGFN-FEAE 417

Query: 427 LSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDA 486
           +STRPEK +GSDA W+ A N +   LD         +  G+  G+GAFYGPK + ++KDA
Sbjct: 418 ISTRPEKSIGSDADWERATNALMKALDKAG------LKYGINEGDGAFYGPKIDIVIKDA 471

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNL 546
           + R WQC TIQ DF LP RF+  YV    E+  PVM+HR + GS+ERFIG++ E+F G  
Sbjct: 472 LDRRWQCATIQCDFTLPERFDLAYVGQDGERHRPVMVHRVILGSLERFIGVLTEHFAGAF 531

Query: 547 PLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPII 606
           P+WL+P Q  +  +T +  EY  ++ + L+   +  E D RNE + YK+RE  ++KIP +
Sbjct: 532 PVWLAPEQVRILNVTDAQAEYTSKVLDALREQGIRAEADLRNEKLGYKVREAQLEKIPYM 591

Query: 607 IICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
           ++ GDKE     + +R          +  +   ++  E + P
Sbjct: 592 LVVGDKEVETGVVNVRTRSGENLGVKTPAEVAAMIHDEGMEP 633


>gi|307200699|gb|EFN80796.1| Threonyl-tRNA synthetase, cytoplasmic [Harpegnathos saltator]
          Length = 691

 Score =  615 bits (1586), Expect = e-174,   Method: Composition-based stats.
 Identities = 241/646 (37%), Positives = 368/646 (56%), Gaps = 22/646 (3%)

Query: 2   PSDIKLTFPDGSIKNF-PVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           P+DI +  PDG   +     +T  DVA+SIS+ LA   V   +N ++ DL  P+  +  +
Sbjct: 49  PADITVMLPDGKEVSAQSWRSTPYDVAKSISQGLADNTVIAKVNNELWDLDRPLEGDCKL 108

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDE 118
           +++  +DP    V  HS AHI+ EA++ ++    +  GP IE+GFYYD   + +  S  +
Sbjct: 109 QLLKFDDPEGQQVFWHSSAHILGEAMERVYGGC-LCYGPPIENGFYYDMHLDDKGISYTD 167

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
              +E   + I+    PF +  ++ E   E+F+     +K+ I+         T YR G 
Sbjct: 168 FPYLESLYKNIVKEKQPFERLEMTKENLLEMFKY--NEFKLRIINEKIHTPTTTAYRCGP 225

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLCRGPHVR TG+++   K+ K + AYW G++N   L R+YG ++   ++L ++    
Sbjct: 226 LIDLCRGPHVRHTGKIR-AVKITKNSSAYWEGNANAESLQRLYGISFPDNKQLKEWEKLQ 284

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
           EE+ KRDHRK+ +E +LF   E   G  F+  +G  I+ TLI ++R + +   ++E+ +P
Sbjct: 285 EEAAKRDHRKIGKEQELFFFHELSPGSCFFQPRGAYIYNTLIDFIRSEYRKRGFQEVISP 344

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  LWQ SGHW  Y  NMF+         +  T+ALKPMNCPGH  +F+   +S+RE
Sbjct: 345 NIYNSKLWQVSGHWQHYAENMFSFDV------EKETYALKPMNCPGHCMIFDVRSRSWRE 398

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+RLA+FG ++RNE SG+L GL RVR F QDDAH+FC+ +Q+  E L   + +  +Y  
Sbjct: 399 LPLRLADFGVLHRNEMSGALTGLTRVRRFQQDDAHIFCSVDQINKEILSALDFLRHVYSV 458

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF   +  LSTRPEK +G  A+W+ AE  ++  L+T            +   +GAFYGP
Sbjct: 459 FGFTFDLC-LSTRPEKFLGDIAIWNQAEKALEDSLNTFDEPW------TLNPQDGAFYGP 511

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  ++DA+ R  QC TIQ+DF LP RFN  YVN   EK  PV+IHRA+ GS+ER I I
Sbjct: 512 KIDITIRDALKRAHQCATIQLDFQLPIRFNLSYVNESGEKVRPVIIHRAILGSVERMIAI 571

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FRNETINYKIR 596
           + E++ G  P WLSP QA+V  + S   EYA ++   L    + +E D   N++ N KIR
Sbjct: 572 LTESYAGKWPFWLSPRQAMVVPVASQLDEYAYQVKQKLWDAGIMVEIDVDPNDSFNKKIR 631

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
              + +   I++ G+KE +  ++ IR   +    ++ + D I  L 
Sbjct: 632 NAQLAQFNFILVVGEKERNAGTVNIRTRDNVVHGEMGVEDLIEKLK 677


>gi|19113156|ref|NP_596364.1| cytoplasmic threonine-tRNA ligase Trs1 (predicted)
           [Schizosaccharomyces pombe 972h-]
 gi|3183175|sp|P87144|SYTC_SCHPO RecName: Full=Threonyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|2104451|emb|CAB08788.1| cytoplasmic threonine-tRNA ligase Trs1 (predicted)
           [Schizosaccharomyces pombe]
          Length = 703

 Score =  615 bits (1586), Expect = e-174,   Method: Composition-based stats.
 Identities = 226/646 (34%), Positives = 354/646 (54%), Gaps = 33/646 (5%)

Query: 3   SDIKLTFPDGSI-KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIE 60
            +I +T PDG + K      T   +A SIS+ LA +     +NG+  DL+ P+    +++
Sbjct: 47  EEIDITLPDGKVIKGTSWETTPISIAASISKGLADRVTVAIVNGEPWDLTRPLEASCTLK 106

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF--DKEQPFSSDE 118
           +    DP    V  HS AHI+ EA +  +    + IGP  ++GF+Y+   D  +  ++D+
Sbjct: 107 LCDFNDPEGKRVFWHSSAHILGEATELSF-HCHLCIGPPTDEGFFYEMGIDNGRVITNDD 165

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE-SIPAKENVTLYRQG 177
            + IE   ++ I +  PF +  +S E   E+   +   YK  I++  IP   + T+YR G
Sbjct: 166 YSSIESYAKQAIKQKQPFERLVISKEGLLEM--FRYNKYKQYIIQTKIPDGASTTVYRCG 223

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
              DLC GPHV  TG++K F  + K + +Y+ GD+    L R+YG ++   +++ +Y  F
Sbjct: 224 PLIDLCTGPHVPHTGRIKSF-AVTKNSSSYFLGDAKNDSLQRVYGISFPDNKQMQEYKTF 282

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINT 296
           L E+ KRDHRK+ R+ +LF   E   G  F+   G +I+ TL+ YMR +  K  Y+E+ T
Sbjct: 283 LAEAAKRDHRKIGRDQELFFFNEISPGSCFFLPHGARIYNTLLKYMRYQYSKRGYQEVIT 342

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P + + +LW+ SGHW++Y  NMF+         +   +ALKPMNCPGH  +F    +SYR
Sbjct: 343 PNMYNVNLWKTSGHWNNYSENMFSF------DIEKEKYALKPMNCPGHCVMFKSRDRSYR 396

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +LP R+A+FG ++RNE SG+L GL RVR F QDDAH+FCT +Q+ +E     + +  +Y 
Sbjct: 397 DLPWRVADFGVLHRNEFSGALSGLTRVRRFQQDDAHIFCTPDQVRSEIEGCFDFLKEVYG 456

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
            FGF   +   +   EK +G  A WD AE  +K  LD      +      +  G+GAFYG
Sbjct: 457 TFGFTFHLELSTRPEEKYLGDLATWDKAEAQLKAALDASGYKWE------LNAGDGAFYG 510

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS-----------HSEKCHPVMIHR 525
           PK +  + DA+ R  QC TIQ+DF LP RF   +              +++   PVM+HR
Sbjct: 511 PKIDITVFDALKRQHQCATIQLDFQLPERFQLEFHAPASAEEAKESGNNNKYTRPVMVHR 570

Query: 526 AVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD 585
           A+ GS+ER I I+ E++ G  P W+SP Q  +  ++++A  YA ++ N+L    + ++TD
Sbjct: 571 AILGSLERMIAILTEHYAGKWPFWMSPRQVCIIPVSAAAYNYADKVHNILSEADIFVDTD 630

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
             + T+  KIR   + +   I + G +E S  S+ +R       Q 
Sbjct: 631 KSDNTLPKKIRNAQLAQYNFIFVVGAEEESTNSVNVRNRDDPKKQS 676


>gi|87309081|ref|ZP_01091218.1| threonyl-tRNA synthetase [Blastopirellula marina DSM 3645]
 gi|87288072|gb|EAQ79969.1| threonyl-tRNA synthetase [Blastopirellula marina DSM 3645]
          Length = 668

 Score =  615 bits (1586), Expect = e-174,   Method: Composition-based stats.
 Identities = 252/652 (38%), Positives = 383/652 (58%), Gaps = 22/652 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI--E 60
            +++  PDG++K++ +  T  DVA  I   LAK  +A  I+G+      P+  EGS+   
Sbjct: 1   MLEVHLPDGNVKSYDIAITPMDVAADIGAGLAKATLAAQIDGQTVGFDAPLPTEGSVNLR 60

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           ++T +D  +L V+RHSCAHIMA AV  ++  VQ+A GP IE GFYYDFD E   ++++  
Sbjct: 61  LLTNKDKEALGVMRHSCAHIMARAVMRLFDGVQLAFGPTIEGGFYYDFDLEHKLTAEDFP 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES-IPAKENVTLYRQGEW 179
            IE +M++II  + PF +   S E A  + +   + YK+E +E+ +   E ++ YRQGE+
Sbjct: 121 AIEAEMKKIIKENEPFERIEESREGALAVVKDIDQHYKIEHIETGLSGHETLSFYRQGEF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV    +    +KL+ VAGAYW+G S+   L R+Y TA+  + +L  +L  LE
Sbjct: 181 IDLCRGPHVPRP-KSIGAYKLLSVAGAYWKGSSDNKQLQRVYATAFFNKDDLAAHLEKLE 239

Query: 240 ESEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
           E+++RDHR L ++++LF I    G G+I W  KG  + Q L  ++  ++K  +YE + TP
Sbjct: 240 EAKRRDHRTLGKQLELFAINPLVGQGLILWLPKGAVVRQQLTDFVSEQLKKHEYESVFTP 299

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    L++ SGH+  Y+ + F        + D   + LKPMNCP H+ ++ +  +SYRE
Sbjct: 300 NIGKVDLYKTSGHYPYYKDSQFPPIH----VSDDEEYLLKPMNCPHHIMIYKNRPRSYRE 355

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LPVRL+EFG+VYR E SG L+G+ RVRGF QDDAH+FC +EQ+  E  K   +   +   
Sbjct: 356 LPVRLSEFGTVYRYEQSGELNGMTRVRGFCQDDAHIFCMEEQVEEEFRKCIEMTQYVLNS 415

Query: 418 FGFEKIMVKLSTRPEK---RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            G     V+L  R       VG+  +WD AE  +  V   +       I+     GE AF
Sbjct: 416 LGLTDYRVRLGFRDPDNGKYVGNSKVWDRAEQSLVSVCKNMG------IDAVAEAGEAAF 469

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLP--SRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           YGPK ++++ D +GR+WQ GT+Q+D+NLP   RF   YV + ++   PVMIHRA FGS+E
Sbjct: 470 YGPKADFVVNDCLGREWQLGTVQLDYNLPSTERFALEYVGADNQMHRPVMIHRAPFGSLE 529

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
           RF+G++IE+F G  PLWL+P Q  V  ++    EYA+++   LK     ++ D+R E I 
Sbjct: 530 RFMGVLIEHFAGAFPLWLAPEQVRVLVVSQKFEEYARKVEAELKQAGFRVKGDYRPEKIG 589

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            KIR+  ++ IP + + G +E    S+ +R         + + +AI  L +E
Sbjct: 590 SKIRDAQLELIPYMFVIGGREMETESVAVRDRIDGDLGSMKVAEAIDKLKQE 641


>gi|88803834|ref|ZP_01119357.1| threonyl-tRNA synthetase [Polaribacter irgensii 23-P]
 gi|88780362|gb|EAR11544.1| threonyl-tRNA synthetase [Polaribacter irgensii 23-P]
          Length = 646

 Score =  615 bits (1586), Expect = e-174,   Method: Composition-based stats.
 Identities = 254/650 (39%), Positives = 386/650 (59%), Gaps = 19/650 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            IK+T PDG+IK F  ++T  D+A+SIS   A+  ++   N    + S P+  +GS+ + 
Sbjct: 1   MIKITLPDGTIKEFAKNSTPMDIAKSISEGFARNVISANFNKTTVETSTPLTTDGSLILY 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPF-SSDELAQ 121
           T ED        HS AH++AEA+ + +P+ ++ IGP I++GFYYD D E+   S  +  Q
Sbjct: 61  TFEDTNGKKAFWHSSAHVLAEAILNFYPKAKLTIGPAIDNGFYYDVDLEEDIISDKDFKQ 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +E K  EI      F  + +S   A   + ++   YKVE++E++   + +T     ++ D
Sbjct: 121 LETKFLEIARGKHEFSIRSVSKADALSKYAAEDNPYKVELIENLTDGD-ITFCDHSDFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG HV +TG +K   K+  VAGAYWRGD     L+R+YG ++  Q+ LT+YL  LEE+
Sbjct: 180 LCRGGHVPNTGIIK-AIKITSVAGAYWRGDEKNKQLTRVYGISFPKQKLLTEYLALLEEA 238

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           ++RDHRKL RE++LF  ++    G+  W  KG  +   L  ++++ + K  YE + TP +
Sbjct: 239 KQRDHRKLGRELELFTFSQKVGAGLPLWLPKGAALRGRLEDFLKKAQKKAGYEMVMTPHI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             + L+  SGH++ Y A+ F    +  T K    F LKPMNCP H  V+N    SY++LP
Sbjct: 299 GQKELYVTSGHYEKYGADSFQ---SIKTPKMDEEFLLKPMNCPHHCEVYNFKPYSYKDLP 355

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
            R AEFG+VYR E SG LHGL RVRGFTQDDAH+FCT EQ+  E   + +L++ ++   G
Sbjct: 356 KRFAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCTPEQLDQEFKDVIDLVLYVFSSLG 415

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           FE    ++S R    PEK +G    W+ AEN +      I  ++   ++  V  GE AFY
Sbjct: 416 FEDFTAQVSIRDKNTPEKYIGDVETWEIAENAI------ISAATDKGLSFVVEEGEAAFY 469

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDA+GR WQ GTIQVD+NLP RF+  Y  + ++   PVMIHRA FGS+ERFI
Sbjct: 470 GPKLDFMVKDALGRSWQLGTIQVDYNLPKRFDLTYKGADNQLHRPVMIHRAPFGSMERFI 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            +++E+  GN PLWL+P Q I+  I+    +Y++++   L++  +    D RNE    KI
Sbjct: 530 AVLLEHTGGNFPLWLTPDQVILLPISDKYQKYSEKVLESLENSEIRALADNRNEKTGRKI 589

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           R+  + K P ++I G+KE  E ++ +R+ G       ++ + I ++  E 
Sbjct: 590 RDAEVSKTPYMVIVGEKEEQEGTVSVRKHGEGDIGTFTIEEFISLIKTEE 639


>gi|225013012|ref|ZP_03703428.1| threonyl-tRNA synthetase [Flavobacteria bacterium MS024-2A]
 gi|225002828|gb|EEG40808.1| threonyl-tRNA synthetase [Flavobacteria bacterium MS024-2A]
          Length = 648

 Score =  615 bits (1585), Expect = e-174,   Method: Composition-based stats.
 Identities = 246/649 (37%), Positives = 384/649 (59%), Gaps = 19/649 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEII 62
            I++ FPD S++ +    T  ++A SIS  LA+  ++   NG++ +    + E G I++ 
Sbjct: 1   MIEIQFPDQSVRTYSEGVTPFEIASSISEGLARNVLSAKFNGQIVESVTSLHENGKIQLF 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
           T  D        HS AH++A+A+ +++PE ++ IGP IE+GFYYD D  E   +  +L +
Sbjct: 61  TWNDQEGKTAFWHSSAHVLAQALLALYPECKLTIGPAIENGFYYDADFGEYSLTEKDLVE 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEKK  E   +   F  +  S  +A   ++ +   +K E++E++     +T     ++ D
Sbjct: 121 IEKKFLEFARQKFEFKMRSASKAEALAYYKKENNPFKTELIENL-EDGTITFCDHADFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG H+ +TG +K   KL  +AGAYWRGD  +P L+R+YG ++  Q++LT+YL  +EE+
Sbjct: 180 LCRGGHIPNTGSIK-AIKLTNIAGAYWRGDETKPQLTRVYGISFPKQKQLTEYLELVEEA 238

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           +KRDHRKL +E++LF  ++    G+  W  KG  + + L ++++  + K  YE++ +P +
Sbjct: 239 KKRDHRKLGKELELFTFSQKVGQGLPLWLPKGAALRERLENFLKAAQNKAGYEQVISPHI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             + L+  SGH++ Y A+ F       T  +   F LKPMNCP H  ++N    SYR+LP
Sbjct: 299 GSKELYMTSGHYEKYGADSFQ---PIQTPAEGEEFLLKPMNCPHHCEIYNAKPWSYRDLP 355

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
            R AEFG+VYR E SG LHGL RVRGFTQDDAH+FC   Q+ +E  K+ +L++ ++   G
Sbjct: 356 KRYAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCMPSQLDDEFKKVIDLVLYVFGSLG 415

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           FE    ++S R  +     +GS   W+ AE  +      I  + +  ++  +  GE AFY
Sbjct: 416 FENFTAQVSLRDPEKPEKYIGSTHNWELAEQAI------INAAKEKNLDYVIETGEAAFY 469

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDA+GR WQ GTIQVD+NLP RF+  Y  S +E   PVMIHRA FGS+ERF+
Sbjct: 470 GPKLDFMVKDALGRKWQLGTIQVDYNLPERFDLNYKGSDNELHRPVMIHRAPFGSLERFV 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            I++E+  GN PLWL P Q  +  ++     YA +++N L++H +    D RNETI  KI
Sbjct: 530 AILLEHTGGNFPLWLMPNQVNILCVSEKCKNYALKVSNFLENHEIRALLDDRNETIGKKI 589

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           RE  I K+P +II G+KE   +++ +R+         S    + ++  E
Sbjct: 590 RESEISKVPYMIIIGEKEEENQTVSLRKHSEGDLGSFSTESVVELINTE 638


>gi|258404181|ref|YP_003196923.1| threonyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
 gi|257796408|gb|ACV67345.1| threonyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
          Length = 649

 Score =  615 bits (1585), Expect = e-174,   Method: Composition-based stats.
 Identities = 286/649 (44%), Positives = 411/649 (63%), Gaps = 21/649 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSD-VAESISRSLAKKAVAVAINGKVCDLSDPVREGS--IEI 61
           +++   D  +   P   + ++ +A+++S+   K+ VA      V DL DPV EG   +E 
Sbjct: 1   MQVRIADNEV-EVPSGQSCAEALAQAVSKKKMKQVVAGKCGETVLDLRDPVPEGCSELEP 59

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +  E P  LAVIRHS AH+MAEAV+S++P  +V IGP IEDGFYYDFD E+ F+ ++L  
Sbjct: 60  VFAESPEGLAVIRHSTAHVMAEAVKSLFPTAKVTIGPDIEDGFYYDFDFERSFTPEDLEA 119

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK+M++ +  D PF ++ +S ++A++ F  + E+YK+E+LE + A   VTLY    + D
Sbjct: 120 IEKEMEKSVGADMPFERREVSVDEAKKFFLHQNESYKIELLEEMDAD-RVTLYTHNGFTD 178

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG +  F KLMKVAGAYWRGD NR ML RIYGTAW   ++L  YL  LEE+
Sbjct: 179 LCRGPHVPSTGYLSAF-KLMKVAGAYWRGDENRTMLQRIYGTAWARPKDLKNYLQQLEEA 237

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQV 299
           +KRDHRKL  ++DLF  +E+ G G+  WH KG  I   L  + R   ++  Y+ +  P +
Sbjct: 238 KKRDHRKLGAQLDLFSFSEEAGPGMPLWHPKGALIRTILEDFSRKEHLRRGYQLVQGPTL 297

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           L Q LWQ+SGH+D+YR NM+       T  D + + +KPMNC  H+ ++N  ++SYR+LP
Sbjct: 298 LRQELWQRSGHYDNYRENMYF------TEIDDQAYGIKPMNCLAHMLIYNTKIRSYRDLP 351

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R  E G+V+R+E SG LHGL+RVR FTQDDAH+ C  +Q+ +E  KI   +  +   FG
Sbjct: 352 IRYFELGTVHRHEKSGVLHGLLRVRQFTQDDAHILCRPDQLQDEISKIVRFVQDVLGLFG 411

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F+   V++STRPEK +GSD  WD A + +   LD +       +  G+  G+GAFYGPK 
Sbjct: 412 FDYE-VEISTRPEKSIGSDDAWDRATDALTKALDELG------VEYGICAGDGAFYGPKI 464

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +  LKDA+GR WQC TIQ DF LP RF+  YV    ++  PVM+HRA+ G+IERF+G+++
Sbjct: 465 DMKLKDALGRKWQCTTIQCDFTLPERFDLVYVGQDGQRHRPVMLHRAMLGAIERFLGVLL 524

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E++ G LP WL P QA V  IT    EYAQ+  + L++  +  E D RNE + YK+RE  
Sbjct: 525 EHYAGALPTWLMPEQARVLNITDDHAEYAQQCVDQLRAAGIRAEADLRNEKLGYKVREAQ 584

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
           ++KIP +++ G++E +     +R  G      + + D I  +  + L P
Sbjct: 585 MEKIPYVLVVGEQEVATSGANLRLRGGKNIGVLPVDDIIDRIRHDCLEP 633


>gi|288802831|ref|ZP_06408268.1| threonine--tRNA ligase [Prevotella melaninogenica D18]
 gi|288334648|gb|EFC73086.1| threonine--tRNA ligase [Prevotella melaninogenica D18]
          Length = 649

 Score =  615 bits (1585), Expect = e-174,   Method: Composition-based stats.
 Identities = 247/650 (38%), Positives = 396/650 (60%), Gaps = 19/650 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            +K+TFPDGS++ +    TG  +AESIS +LA+  V+  +NG+  +L+ P+  + SI + 
Sbjct: 1   MVKITFPDGSVREYEQGVTGFQIAESISPALARDVVSCGVNGETTELNRPINEDASIALY 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD--FDKEQPFSSDELA 120
             +D        H+ AH++AEA+Q ++P +Q   GP +E+GF+YD    + Q  S ++  
Sbjct: 61  KFDDEEGKHTFWHTSAHLLAEALQELYPGIQFGFGPAVENGFFYDVMPAEGQTISENDFP 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IE+KM+E+  ++ P +++ +S   A + F +  + YKVE +        ++ Y QG + 
Sbjct: 121 KIEEKMRELAKKNEPVVRRNVSKADAVKEFTADGQEYKVEHIVEDLEDGTISTYSQGNFT 180

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ STG +K   K+  VAGA+WRGD+ R  ++RIYG  +  ++ L +YL  LEE
Sbjct: 181 DLCRGPHLVSTGAIK-AVKITSVAGAFWRGDAKREQMTRIYGITFPKKKMLDEYLEMLEE 239

Query: 241 SEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++KRDHRK+ +EM+LF  +   G G+  W  KG ++   L   +RR +   +Y+E+ TP 
Sbjct: 240 AKKRDHRKIGKEMELFMFSDRVGKGLPIWLPKGTQLRLRLQELLRRLLRPYNYQEVITPG 299

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +  ++L+  SGH+  Y  + F       T ++   + LKPMNCP H  ++ +  +SY++L
Sbjct: 300 IGGKNLYVTSGHYAHYGKDAFQ---PIHTPEEDEEYMLKPMNCPHHCEIYAYKPRSYKDL 356

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG+V+R E SG LHGL RVR FTQDDAH+F   +Q+  E     ++I+ ++K F
Sbjct: 357 PLRIAEFGTVFRYEKSGELHGLTRVRTFTQDDAHIFVRPDQVKAEFENNIDIILKVFKTF 416

Query: 419 GFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           GF+    ++S R  +     +GSD +W+++E  +K         ++  +N  V LGE AF
Sbjct: 417 GFDNYEAQISLRDPEDKEKYIGSDEVWEESEAAIKEA------CAEKGLNARVELGEAAF 470

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK ++++KDAIGR WQ GTIQVD+NLP+RF   Y    + K  PVM+HRA FGS+ERF
Sbjct: 471 YGPKLDFMVKDAIGRRWQLGTIQVDYNLPNRFKLEYTAEDNSKKTPVMVHRAPFGSLERF 530

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             ++IE+  G+ PLWL+P Q  +  I+    +YAQ++     +H +    D RNE I  K
Sbjct: 531 TAVLIEHTAGHFPLWLTPDQVAILPISEKYNDYAQKVKAYFDAHDVRSIMDDRNEKIGRK 590

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IR++ +K++P ++I G+KEA+E  + +R+ G      +++      +  E
Sbjct: 591 IRDNELKRVPYMVIVGEKEAAEGLVSMRQQGGGEQATMTMEAFAERINNE 640


>gi|242033449|ref|XP_002464119.1| hypothetical protein SORBIDRAFT_01g012680 [Sorghum bicolor]
 gi|241917973|gb|EER91117.1| hypothetical protein SORBIDRAFT_01g012680 [Sorghum bicolor]
          Length = 739

 Score =  615 bits (1585), Expect = e-174,   Method: Composition-based stats.
 Identities = 233/647 (36%), Positives = 372/647 (57%), Gaps = 24/647 (3%)

Query: 5   IKLTFPDGSIKNFPVH-ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           IK+T PDG+IK       T  D+A+ IS   A   +   ++  + D+  P+  +  +++ 
Sbjct: 105 IKVTLPDGAIKEGKKWITTPMDIAKEISSGFASSCLIAQVDETLWDMGRPLESDCKLQMF 164

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII--EDGFYYD-FDKEQPFSSDEL 119
             +         HS AHI+ E+++  +   ++ IGP     +GFYYD + K+Q  + +  
Sbjct: 165 KFDTNEGRDTFWHSSAHILGESIERAY-GCKLCIGPCTTRGEGFYYDAYYKDQTLNEEHF 223

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IE + ++ +A   PF +  +S  +A E+F      +KVEI+  +P  + +T+YR G  
Sbjct: 224 GIIESQAKKAVAEKQPFERIEVSRAEALEMFAE--NEFKVEIINELPEDKTITVYRCGPL 281

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPH+ +T  VK F   +K + +YWRG  +R  L R+YG ++   + LT+Y +FLE
Sbjct: 282 VDLCRGPHIPNTSFVKAF-ACLKASSSYWRGKVDRESLQRVYGISFPDSRRLTEYKHFLE 340

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E++KRDHR L +  +LF   E   G  F+   G +I+  L+ +MR++ +   Y+E+ +P 
Sbjct: 341 EAKKRDHRILGKAQELFFFHELSPGSCFFLPHGARIYNKLMDFMRQQYRARGYQEVLSPN 400

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           + +  LW+ SGH  +Y+ NMF  +       + + F LKPMNCPGH  +F + ++SYREL
Sbjct: 401 MYNMQLWETSGHAANYKENMFVFEI------EKQEFGLKPMNCPGHCLMFANRVRSYREL 454

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+A+FG ++RNE SG+L GL RVR F QDDAH+FC ++Q+ +E   + + I  +Y+ F
Sbjct: 455 PLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCREDQIKDEVKAVLDFINYVYEIF 514

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+  + +LSTRPEK +G    W+ AE  +   L+      +      +  G+GAFYGPK
Sbjct: 515 GFKYEL-ELSTRPEKYLGEIETWNKAEQQLTEALNEFGKPWK------INEGDGAFYGPK 567

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK-CHPVMIHRAVFGSIERFIGI 537
            +  + DA+ R +QC T+Q+DF LP RF   Y      K   PVMIHRA+ GS+ER   I
Sbjct: 568 IDIGVFDALKRKFQCATLQLDFQLPIRFKLAYSAEDEAKIERPVMIHRAILGSVERMFAI 627

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           ++E++ G  PLWLSP QAIV +++S +VEYA+++   L       + D  + TI  K+RE
Sbjct: 628 LLEHYNGKWPLWLSPRQAIVCSVSSGSVEYAKQVLATLHEAGFHADIDASDRTIQKKVRE 687

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
             + +   I++ G +EA   +I +R   +     +S+   +  L +E
Sbjct: 688 AQLAQFNYILVVGAQEAETGNICVRVRDNADLATMSVDGFVTRLKEE 734


>gi|281203096|gb|EFA77297.1| threonyl-tRNA synthetase [Polysphondylium pallidum PN500]
          Length = 716

 Score =  614 bits (1584), Expect = e-173,   Method: Composition-based stats.
 Identities = 225/645 (34%), Positives = 360/645 (55%), Gaps = 23/645 (3%)

Query: 4   DIKLTFPDGSIKN-FPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
            IK+T PDG + + F    T   VA+ ISR LA   V+  ++ ++ D++ P+  + ++ +
Sbjct: 82  PIKITLPDGKVVDGFAGKTTPYLVAKGISRGLADAIVSSLVDEQIWDIARPLEKDCNLVL 141

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK--EQPFSSDEL 119
              +         HS AHI+ +A++ I+   Q+ IGP   +GFYYD      +  SS++ 
Sbjct: 142 CKFDSEAGKKTFWHSSAHILGQAMERIYGG-QLCIGPATNEGFYYDMAMSDNKIVSSEDY 200

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A I +   +I+     F +  +  + A +LF+  K  YK EI+  IPA++ V+LYR G  
Sbjct: 201 ATIVEVANKIVQEKQAFERLAVPRDLALQLFKYNK--YKTEIISKIPAEDTVSLYRCGTL 258

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPH+ +T  VK F  + K + AYW G +    L R+YG A+  +++L +Y  F++
Sbjct: 259 VDLCRGPHLPNTSYVKAFSVV-KNSSAYWLGKAENDPLQRVYGIAFPDKKQLEEYQNFMK 317

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+  RDHR + +  +LF       G  F+   G +I+  L+ ++R +     + E+ TP 
Sbjct: 318 EAALRDHRNVGKNQELFFFHPYSPGCAFFLPHGTRIYNRLVEFIRHEYHRRGFTEVITPT 377

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +  Q LW++SGHW  Y  NMF +KC      D + ++LKPMNCP H  +F +  +SYREL
Sbjct: 378 MFSQQLWEESGHWAKYGENMFNLKC------DDQNYSLKPMNCPSHCLMFGNRSRSYREL 431

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R A+FG ++RNE +G+L GL RVR F QDDAH+FCT + +  E       +  +Y  F
Sbjct: 432 PIRFADFGVLHRNELAGALTGLTRVRKFQQDDAHIFCTPDMVEQEISSCLEFMQHVYGIF 491

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE  + +LSTRP+  +G+ A WD AEN ++  L+      +      +  G+GAFYGPK
Sbjct: 492 GFEFQL-ELSTRPDNHLGTAAQWDVAENSLRDALNKFGKPWK------LNPGDGAFYGPK 544

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH-SEKCHPVMIHRAVFGSIERFIGI 537
            +  + D + R  QC TIQ+DF LP RF   Y+ S   E+  PV+IHRA+ GS+ER + I
Sbjct: 545 IDIQIFDVLKRAHQCATIQLDFQLPIRFELEYMGSGPEERHRPVIIHRAILGSVERMMAI 604

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE+  G  P W+SP Q +V T++    +YA+ +   L       + D  ++T+  K+RE
Sbjct: 605 LIEHTAGKWPFWVSPRQVLVATVSEKFADYAKSVTKTLTDAGFYADVDLSDKTLPKKVRE 664

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             + +   I++ G++E +  ++ +R   +     +++   I    
Sbjct: 665 AQLSQYNYILVVGEEELNNNTVNVRTRDNVVRGSITVDALIEEFK 709


>gi|58617659|ref|YP_196858.1| threonyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel]
 gi|73919787|sp|Q5FGP1|SYT_EHRRG RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|58417271|emb|CAI28384.1| Threonyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel]
          Length = 633

 Score =  614 bits (1583), Expect = e-173,   Method: Composition-based stats.
 Identities = 306/640 (47%), Positives = 424/640 (66%), Gaps = 15/640 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I + F D S K F     GSD+   +   L  KA+A+ IN K  DLS  +  +   E+I
Sbjct: 1   MINVYFSDNSCKQFLPGIKGSDIITHLFPELLNKAIAIKINDKSLDLSTEITEDCKFEVI 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +    L +IRH  AHIMA+A++ ++PEV+  +GP I+DGFYYDF  +  FSS+EL +I
Sbjct: 61  TLDSDEGLDIIRHDTAHIMAQAIKEMFPEVKTVVGPTIKDGFYYDFSTDHIFSSNELEKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E+KM+EII ++  F+++  + E+A   F +K E YKV+I+  IP  EN+T+Y+QG + DL
Sbjct: 121 EEKMREIIKKNESFIREVWTREEAIRFFSNKGEDYKVKIIAKIPIHENITVYKQGSFIDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH  ST   K F KL KV+G+YW G++N   L RIYGTAW T++EL  YL  L E E
Sbjct: 181 CRGPHAPSTKISKAF-KLTKVSGSYWEGNTNNAQLQRIYGTAWRTEEELKLYLNNLIEVE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLD 301
           KRDHRK+ +E++LFHI  +  G IFWH KG  I++ + +Y+R+K+  + Y E+ TP +L 
Sbjct: 240 KRDHRKIGKELELFHIQNEALGQIFWHEKGLIIYRIIENYIRKKLENNGYIEVKTPYLLS 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+QSGHWD +R +MF  +       D +  A+KPMNCP HV +FN  ++SY++LP+R
Sbjct: 300 KTLWEQSGHWDKFREHMFLSEI------DNKVVAIKPMNCPCHVQIFNSKIRSYKDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AEFG+ +R E SG+LHGLMRVR FTQDDAH+FCT++Q+  E LK  NL++ +Y+ FGF+
Sbjct: 354 MAEFGTCHRYEASGALHGLMRVRSFTQDDAHIFCTEDQIIEEALKFCNLLMEVYEVFGFK 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            I+VK S RPEKR GSD +WD AE  +K  +          +N  +  G+GAFYGPK E+
Sbjct: 414 DILVKFSDRPEKRAGSDKIWDKAEEALKASVKAAN------LNYVLNPGDGAFYGPKLEF 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            LKDAIGR+WQCGT+Q+DF LP R  A+Y  S  +K HP+M+HRA+ G+IERFIGI+IE+
Sbjct: 468 TLKDAIGREWQCGTLQMDFVLPERLGAYYTGSDGKKHHPIMLHRAILGTIERFIGILIEH 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G LP+WL+P+Q  + TIT  A++YA  + +     ++  E D  NE INYKIR H  K
Sbjct: 528 HSGKLPIWLAPVQLSILTITEDAIDYAISLKHKAMKQNIRAEVDITNEKINYKIRSHISK 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           KIP++ I G KE    S+ IR   S     +S   A+  L
Sbjct: 588 KIPVLWIIGKKEIETESVSIRYLESKDQHIMSSDKALKTL 627


>gi|293376470|ref|ZP_06622699.1| threonine--tRNA ligase [Turicibacter sanguinis PC909]
 gi|325842051|ref|ZP_08167588.1| threonine--tRNA ligase [Turicibacter sp. HGF1]
 gi|292644892|gb|EFF62973.1| threonine--tRNA ligase [Turicibacter sanguinis PC909]
 gi|325489773|gb|EGC92129.1| threonine--tRNA ligase [Turicibacter sp. HGF1]
          Length = 645

 Score =  614 bits (1583), Expect = e-173,   Method: Composition-based stats.
 Identities = 264/649 (40%), Positives = 385/649 (59%), Gaps = 22/649 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            I +TFPDG++K F    T   +A SIS  L KK VA  ING + DL+ P+  +  IE+I
Sbjct: 1   MINITFPDGNVKQFENGVTADAIAHSISPGLRKKCVAAKINGHLYDLTRPIEADAKIELI 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T + P +  +I HS AH+MA A++ ++P+ +  +GP IEDGFYYD D E   S  +L  I
Sbjct: 61  TNDRPEAWEIINHSAAHLMAAAIKRLYPDAKFGVGPAIEDGFYYDIDTESKISEADLPAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK MQ+I +   P ++Q LS E+A+ELF +  + YK+E++++I   E +T Y +G++ DL
Sbjct: 121 EKMMQKISSEALPIIRQELSREEAKELFAA--DEYKLELIDAIKEGEIITTYSEGDFTDL 178

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C G HV +T  VK FFKL+ VAGAYWRGDS+  ML+RIYG A  ++  L  +L  LEE +
Sbjct: 179 CSGVHVPNTKDVK-FFKLLSVAGAYWRGDSDNKMLTRIYGAAALSKDALADHLRILEERK 237

Query: 243 KRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           +RDH+KL RE++LF  +   G G+  W   G K+ Q +  Y+   +    Y+ + TP + 
Sbjct: 238 ERDHKKLGRELELFTFSPLVGQGLPIWLPNGMKVRQQIERYITELEEDYGYQHVATPVMG 297

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
              L++ SGHW  Y+ +MF     D+         L+PM+CP H+ V+   L+SYR+LP+
Sbjct: 298 SVDLYRTSGHWAHYQEDMFVPMEMDN-----EELVLRPMSCPHHMMVYKTKLRSYRDLPI 352

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R AE    +R E SG+L GL RVR  T  D+H+F   +Q+  E  +   LI  + KDFG 
Sbjct: 353 RYAEQVIQHRFEASGALTGLERVRAMTLTDSHLFVRPDQIKEEFSRCLELIHRVIKDFGV 412

Query: 421 EKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           E    +LS R      K    D +W++AE++++  L       ++ I      GE AFYG
Sbjct: 413 EINYYRLSLRDPENKEKYFDDDQMWENAESMLRETLI------ENNIPFIEAEGEAAFYG 466

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK +  +K A+G D    TIQ+DF LP RF+  YV+   EK  PV++HR + G+ ERF+ 
Sbjct: 467 PKLDIQIKTALGHDITMSTIQLDFLLPERFDLTYVSETGEKVRPVVMHRGLIGTYERFMA 526

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            +IE +KG  PLWL+P Q  V  + +   +EYA+E+A  L+ + + +E D R E + YKI
Sbjct: 527 YLIETYKGAFPLWLAPTQVTVIPVNNQYHLEYAKEVAKELRKYRVRLEIDEREEKMGYKI 586

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           RE   KKIP+ I+ GDKE +   +  RRFG   TQ + L + +  L +E
Sbjct: 587 RESQTKKIPMSIVLGDKEVANNEVTFRRFGEQKTQTLPLKEFVHFLVEE 635


>gi|295111615|emb|CBL28365.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Synergistetes
           bacterium SGP1]
          Length = 633

 Score =  614 bits (1582), Expect = e-173,   Method: Composition-based stats.
 Identities = 271/640 (42%), Positives = 393/640 (61%), Gaps = 19/640 (2%)

Query: 11  DGSIKNFPVH-ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPR 68
           +G    F       S+V E++   L KKA+A  ++G   DL+  +R G  +E +T  D  
Sbjct: 8   NGKSCEFDRESVRASEVLEAL--GLQKKAIAAKLDGAAVDLNREIRAGGRVEPLTAADEE 65

Query: 69  SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQE 128
            L V+RHSCAH+MA+A++ ++P     IGP I+DGFYYD D     +  +L  IE +M++
Sbjct: 66  GLDVLRHSCAHLMAQAIERLYPGTHFGIGPCIKDGFYYDVDATGTITEQDLPAIEAEMRK 125

Query: 129 IIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           +        ++ +  E A + F+ + + YK E++  + A   V+LYRQG++ DLCRGPHV
Sbjct: 126 LTGAAEKVEREEMRREDALKFFKDRGDPYKEELISELEA-PTVSLYRQGDYVDLCRGPHV 184

Query: 189 RSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRK 248
             T  ++ F KL+ VAGAYWRG     ML+RIYGTA+ T  EL  YL  +EE++ RDHRK
Sbjct: 185 PDTSVIRNF-KLLSVAGAYWRGSEKNKMLTRIYGTAFATPDELKAYLKRMEEAKLRDHRK 243

Query: 249 LAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQ 307
           L RE+DLF + E+G G  F+H KG  +  TLI + RR+  +  Y+E+ TPQ+LD+ LW +
Sbjct: 244 LGRELDLFSLHEEGPGFPFFHPKGMVVMNTLIDFWRREHVRRGYQEVRTPQILDRELWLR 303

Query: 308 SGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGS 367
           SGHWD YR NM+       T  D + FA+KPMNCPG + ++   L SYRELP+R+ E G 
Sbjct: 304 SGHWDHYRENMYF------TEIDEKPFAIKPMNCPGGILIYKTQLHSYRELPMRIGELGV 357

Query: 368 VYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKL 427
           V+R+E SG LHGLMRVR FTQDDAH++C   Q+  E + I +L   +Y D    K  V+L
Sbjct: 358 VHRHERSGVLHGLMRVRCFTQDDAHLYCEPSQIQQEVMGIMDLCRYVYSDVFGFKYAVEL 417

Query: 428 STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAI 487
           ST+PE  +GS   W+ AEN ++  L+             V  G+GAFYGPK ++ L+D I
Sbjct: 418 STKPENAMGSTEQWEAAENGLRAALEQSNTP------YRVNEGDGAFYGPKIDFHLEDCI 471

Query: 488 GRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           GR WQCGTIQ+DF +P RF+  Y+    ++  PVM+HR + GS+ERF+GI+IE++ G  P
Sbjct: 472 GRTWQCGTIQLDFQMPERFDMHYIAEDGKEHRPVMLHRTILGSLERFMGILIEHYAGAFP 531

Query: 548 LWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIII 607
            W++P+QA +  I+ +   YA+E+   L S  +  ETD R+E +  +IR+  ++K+P +I
Sbjct: 532 YWIAPVQAELIPISEAHRAYAEELRKELMSWGVRTETDSRDEKLGKRIRDAQLQKVPYMI 591

Query: 608 ICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLP 647
           + GDKE  ER + +R         +SL     +L+ E  P
Sbjct: 592 VIGDKERDERQVAVRERTKGDLGSMSLEAFQKLLSAEFNP 631


>gi|57239615|ref|YP_180751.1| threonyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|58579605|ref|YP_197817.1| threonyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|73919788|sp|Q5H9Z4|SYT_EHRRW RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|57161694|emb|CAH58624.1| threonyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|58418231|emb|CAI27435.1| Threonyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
          Length = 633

 Score =  614 bits (1582), Expect = e-173,   Method: Composition-based stats.
 Identities = 306/640 (47%), Positives = 424/640 (66%), Gaps = 15/640 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I + F D S K F     GSD+   +   L  KA+A+ IN K  DLS  +  +   E+I
Sbjct: 1   MINVYFSDNSCKQFLPGIKGSDIITHLFPELLNKAIAIKINDKSLDLSTEITEDCKFEVI 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +    L +IRH  AHIMA+A++ ++PEV+  +GP I+DGFYYDF  +  FSS+EL +I
Sbjct: 61  TLDSDEGLDIIRHDTAHIMAQAIKEMFPEVKTVVGPTIKDGFYYDFSTDHIFSSNELEKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E+KM+EII ++  F+++  + E+A   F +K E YKV+I+  IP  EN+T+Y+QG + DL
Sbjct: 121 EEKMREIIKKNESFIREVWTREEAIRFFSNKGEDYKVKIIAKIPIHENITVYKQGSFIDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH  ST   K F KL KV+G+YW G++N   L RIYGTAW T++EL  YL  L E E
Sbjct: 181 CRGPHAPSTKISKAF-KLTKVSGSYWEGNTNNAQLQRIYGTAWRTEEELKLYLNNLIEVE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLD 301
           KRDHRK+ +E++LFHI  +  G IFWH KG  I++ + +Y+R+K+  + Y E+ TP +L 
Sbjct: 240 KRDHRKIGKELELFHIQNEALGQIFWHEKGLIIYRIIENYIRKKLENNGYIEVKTPYLLS 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+QSGHWD +R +MF  +       D +  A+KPMNCP HV +FN  ++SY++LP+R
Sbjct: 300 KTLWEQSGHWDKFREHMFLSEI------DNKVVAIKPMNCPCHVQIFNSKIRSYKDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AEFG+ +R E SG+LHGLMRVR FTQDDAH+FCT++Q+  E LK  NL++ +Y+ FGF+
Sbjct: 354 MAEFGTCHRYESSGALHGLMRVRSFTQDDAHIFCTEDQIIEEALKFCNLLMEVYEVFGFK 413

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            I+VK S RPEKR GSD +WD AE  +K  +          +N  +  G+GAFYGPK E+
Sbjct: 414 DILVKFSDRPEKRAGSDKIWDKAEEALKASVKAAN------LNYVLNPGDGAFYGPKLEF 467

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            LKDAIGR+WQCGT+Q+DF LP R  A+Y  S  +K HP+M+HRA+ G+IERFIGI+IE+
Sbjct: 468 TLKDAIGREWQCGTLQMDFVLPERLGAYYTGSDGKKHHPIMLHRAILGTIERFIGILIEH 527

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G LP+WL+P+Q  + TIT  A++YA  + +     ++  E D  NE INYKIR H  K
Sbjct: 528 HSGKLPIWLAPVQLSILTITEDAIDYAISLKHKAMKQNIRAEVDITNEKINYKIRSHISK 587

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           KIP++ I G KE    S+ IR   S     +S   A+  L
Sbjct: 588 KIPVLWIIGKKEIETESVSIRYLESKDQHIMSSDKALKTL 627


>gi|114600744|ref|XP_001153847.1| PREDICTED: threonyl-tRNA synthetase isoform 7 [Pan troglodytes]
          Length = 715

 Score =  614 bits (1582), Expect = e-173,   Method: Composition-based stats.
 Identities = 240/647 (37%), Positives = 355/647 (54%), Gaps = 29/647 (4%)

Query: 2   PSDIKLTFPDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
              IK+T PDG   +      T   +A  IS+ LA   V   +N  V DL  P+  + S+
Sbjct: 80  SKPIKVTLPDGKQVDAESWKTTPYQIACGISQGLADNTVIAKVNNLVWDLDRPLEEDCSL 139

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQP-FSSDE 118
           E++  ED  + AV  HS AHIM EA++ ++    +  GP IE+GFYYD   E+   SS++
Sbjct: 140 ELLKFEDEEAQAVYWHSSAHIMGEAMERVYGGC-LCYGPPIENGFYYDMYLEEGGVSSND 198

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
            + +E   ++II     F +  +  E    +F+     +K  IL         T+YR G 
Sbjct: 199 FSSLEALCKKIIKEKQAFERLEVKKETLLAMFKY--NKFKCRILNEKVNTPTTTVYRCGP 256

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLCRGPHVR TG++K   K+ K +  YW G ++   L RIYG ++   + L ++  F 
Sbjct: 257 LIDLCRGPHVRHTGKIK-ALKIHKNSSTYWEGKADMETLQRIYGISFPDPKMLKEWEKFQ 315

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
           EE++ RDHRK+ R+ +L+   E   G  F+  KG  I+  LI ++R + +   ++E+ TP
Sbjct: 316 EEAKNRDHRKIGRDQELYFFHELSPGSCFFLPKGAYIYNALIEFIRSEYRKRGFQEVVTP 375

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  LW  SGHW  Y  NMF+ +       +   FALKPMNCPGH  +F+H  +S+RE
Sbjct: 376 NIFNSRLWMTSGHWQHYSENMFSFEV------EKELFALKPMNCPGHCLMFDHRPRSWRE 429

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+RLA+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E     + + ++Y  
Sbjct: 430 LPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSV 489

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF   +  LSTRPEK +G   +WD AE  ++  L+      +      +  G+GAFYGP
Sbjct: 490 FGFSFKLN-LSTRPEKFLGDIEVWDQAEKQLENSLNEFGEKWE------LNSGDGAFYGP 542

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  +KDAIGR  QC TIQ+DF LP RFN  Y         PV++HRA+ GS+ER I I
Sbjct: 543 KIDIQIKDAIGRYHQCATIQLDFQLPIRFNLTY-------KRPVIVHRAILGSVERMIAI 595

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIR 596
           + EN+ G  P WLSP Q +V  +  +  EYAQ++           + D     T+N KIR
Sbjct: 596 LTENYGGKWPFWLSPRQVMVVPVGPTCDEYAQKVRQQFHDAKFMADIDLDPGCTLNKKIR 655

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              + +   I++ G+KE    ++ IR   +    + ++ + I  L +
Sbjct: 656 NAQLAQYNFILVVGEKEKISGTVNIRTRDNKVHGERTISETIERLQQ 702


>gi|3617770|emb|CAA74705.1| threonyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 709

 Score =  613 bits (1581), Expect = e-173,   Method: Composition-based stats.
 Identities = 239/650 (36%), Positives = 369/650 (56%), Gaps = 24/650 (3%)

Query: 3   SDIKLTFPDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIE 60
             IK+T PDG++K       T  D+A  IS+ LA  A+  A++  + D++ P+  +  +E
Sbjct: 73  DPIKVTLPDGNVKEGKKWETTPMDIAAQISKGLANSALISAVDDVLWDMNRPLEGDCKLE 132

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII--EDGFYYD-FDKEQPFSSD 117
           +   +  +    + HS AHI+ +A++  +   Q+ IGP     +GFYYD F  E   S +
Sbjct: 133 LFKFDSDKGRDTLWHSSAHILGQALEQEY-GCQLCIGPCTTRGEGFYYDGFYGELGLSDN 191

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
               IE    +      PF +  ++ ++A E+F      +KVE++  +PA   +T+YR G
Sbjct: 192 HFPSIEAGAAKAAKEAQPFERIEVTKDQALEMFSENN--FKVELINGLPADMTITVYRCG 249

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
              DLCRGPH+ +T  VK F K ++ + AYW+GD +R  L R+YG ++  Q++L +YL F
Sbjct: 250 PLVDLCRGPHIPNTSFVKAF-KCLRASSAYWKGDKDRESLQRVYGISYPDQKQLKKYLQF 308

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINT 296
           LEE++K DHR L ++ +LF   +   G  F+   G +++  L+ +++ +     Y E+ T
Sbjct: 309 LEEAKKYDHRLLGQKQELFFSHQLSPGSYFFLPLGTRVYNRLMDFIKNQYWHRGYTEVIT 368

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P + +  LWQ SGH D+Y+ NMF          + + F LKPMNCPGH  +F H ++SYR
Sbjct: 369 PNMYNMELWQTSGHADNYKDNMFTFNI------EKQEFGLKPMNCPGHCLIFQHRVRSYR 422

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ELP+RLA+FG ++RNE SG+L GL RVR F QDDAH+FCT EQ+  E   +   I  +YK
Sbjct: 423 ELPLRLADFGVLHRNEASGALSGLTRVRRFQQDDAHIFCTTEQVKGEVQGVLEFIDYVYK 482

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
            FGF   + KLSTRPEK +G    WD AE  +K  ++             +  G+GAFYG
Sbjct: 483 VFGFTYEL-KLSTRPEKYLGDLETWDKAEADLKEAIEAFGKP------LVLNEGDGAFYG 535

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC-HPVMIHRAVFGSIERFI 535
           PK +  + DA+ R +QC T+Q+DF LP RFN  Y      K   PVMIHRAV GS+ER  
Sbjct: 536 PKIDITVSDAMNRKFQCATLQLDFQLPIRFNLEYAAEDEAKKSRPVMIHRAVLGSVERMF 595

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            I++E++KG  P W+SP QAIV  I+  + +YA+++   +K     ++ D  +  I+ K+
Sbjct: 596 AILLEHYKGKWPFWISPRQAIVCPISEKSQQYAEKVQKQIKDAGFYVDADLTDRKIDKKV 655

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           RE  + +   I++ G+ EA+   + +R   +      S+ D +     ++
Sbjct: 656 REAQLAQYNYILVVGETEAATGQVSVRVRDNAAHSVKSIEDLLEEFKAKT 705


>gi|281423114|ref|ZP_06254027.1| threonine--tRNA ligase [Prevotella oris F0302]
 gi|281402450|gb|EFB33281.1| threonine--tRNA ligase [Prevotella oris F0302]
          Length = 649

 Score =  613 bits (1581), Expect = e-173,   Method: Composition-based stats.
 Identities = 246/650 (37%), Positives = 388/650 (59%), Gaps = 19/650 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            +K+TFPDGS++ +    TG  +AESIS +LA+  V+  +NG+  +L+ P+  +  I + 
Sbjct: 1   MVKITFPDGSVREYEQGVTGLQIAESISPALARNVVSCGVNGETVELNRPINEDAKIALY 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD--KEQPFSSDELA 120
             +D        H+ AH++AEA+Q ++P +Q   GP +E GF+YD    K Q  S ++  
Sbjct: 61  KFDDEEGKHTFWHTSAHLLAEALQELYPGIQFGFGPAVESGFFYDVMPPKGQTISENDFP 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IE KM E+  +D P +++ +S   A + F++  + YK E +E       ++ Y QG + 
Sbjct: 121 KIEAKMLELAKKDEPVVRKNISKSDALQEFQADGQTYKCEHIEQDLEDGTISTYTQGHFT 180

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ STG +K   K+  VAGA+WRGD+ R  ++RIYG  +  ++ L +YL  LEE
Sbjct: 181 DLCRGPHLMSTGLIK-AVKITSVAGAFWRGDAKREQMTRIYGITFPKKKLLDEYLVMLEE 239

Query: 241 SEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++KRDHRK+ +EM+LF  +   G G+  W  KG ++   L   +R  +   +Y+E+ TP 
Sbjct: 240 AKKRDHRKIGKEMELFMFSDRVGKGLPIWLPKGTQLRLRLQELLRSLLRPYNYQEVITPG 299

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +  + L+  SGH+  Y  + F       T ++   + LKPMNCP H  V+    +SY++L
Sbjct: 300 IGGKSLYVTSGHYAHYGKDAFQ---PIHTPEEDEEYMLKPMNCPHHCEVYARKPRSYKDL 356

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG+V+R E SG LHGL RVR FTQDDAH+F   +Q+  E     ++I+ ++K F
Sbjct: 357 PLRIAEFGTVFRYEKSGELHGLTRVRTFTQDDAHIFVRPDQVKAEFETNIDIILKVFKTF 416

Query: 419 GFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            F+    ++S R  K     +GSD +W++++N ++         +++ I      GE AF
Sbjct: 417 QFDNYEAQISLRDPKDKEKYIGSDEIWEESQNAIREACKEKGLVAREEI------GEAAF 470

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK ++++KDAIGR WQ GTIQVD+NLP+RF   Y    + K  PVMIHRA FGS+ERF
Sbjct: 471 YGPKLDFMVKDAIGRKWQLGTIQVDYNLPARFKLEYTAEDNTKKTPVMIHRAPFGSLERF 530

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             ++IE+  G+ PLWL+P Q  +  I+    +YA++++    S  +    D RNE I  K
Sbjct: 531 TAVLIEHTAGHFPLWLTPDQVAILPISEKYNDYAKQVSKYFDSVGVRAVIDDRNEKIGRK 590

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IR++ +K+IP ++I G+KEA+E  + +R+ G      + + +    +  E
Sbjct: 591 IRDNELKRIPYMVIVGEKEAAEGLVSMRKQGGGEQATMKMEEFANRINAE 640


>gi|299140628|ref|ZP_07033766.1| threonine--tRNA ligase [Prevotella oris C735]
 gi|298577594|gb|EFI49462.1| threonine--tRNA ligase [Prevotella oris C735]
          Length = 649

 Score =  613 bits (1581), Expect = e-173,   Method: Composition-based stats.
 Identities = 247/650 (38%), Positives = 388/650 (59%), Gaps = 19/650 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            +K+TFPDGS++ +    TG  +AESIS +LA+  V+  +NG+  +L+ P+  +  I + 
Sbjct: 1   MVKITFPDGSVREYEQGVTGLQIAESISPALARNVVSCGVNGETVELNRPINEDAKIALY 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD--KEQPFSSDELA 120
             +D        H+ AH++AEA+Q ++P +Q   GP +E GF+YD    K Q  S ++  
Sbjct: 61  KFDDEEGKHTFWHTSAHLLAEALQELYPGIQFGFGPAVESGFFYDVMPPKGQTISENDFP 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IE KM E+  +D P +++ +S   A + F+S  + YK E +E       ++ Y QG + 
Sbjct: 121 KIEAKMLELAKKDEPVVRKNISKADALQEFQSDGQTYKCEHIEQDLEDGTISTYTQGHFT 180

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ STG +K   K+  VAGA+WRGD+ R  ++RIYG  +  ++ L +YL  LEE
Sbjct: 181 DLCRGPHLMSTGLIK-AVKITSVAGAFWRGDAKREQMTRIYGITFPKKKLLDEYLVMLEE 239

Query: 241 SEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++KRDHRK+ +EM+LF  +   G G+  W  KG ++   L   +R  +   +Y+E+ TP 
Sbjct: 240 AKKRDHRKIGKEMELFMFSDRVGKGLPIWLPKGTQLRLRLQELLRSLLRPYNYQEVITPG 299

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +  + L+  SGH+  Y  + F       T ++   + LKPMNCP H  V+    +SY++L
Sbjct: 300 IGGKSLYVTSGHYAHYGKDAFQ---PIHTPEEDEEYMLKPMNCPHHCEVYARKPRSYKDL 356

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG+V+R E SG LHGL RVR FTQDDAH+F   +Q+  E     ++I+ ++K F
Sbjct: 357 PLRIAEFGTVFRYEKSGELHGLTRVRTFTQDDAHIFVRPDQVKAEFETNIDIILKVFKTF 416

Query: 419 GFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            F+    ++S R  K     +GSD +W++++N ++         +++ I      GE AF
Sbjct: 417 QFDNYEAQISLRDPKDKEKYIGSDEIWEESQNAIREACKEKGLVAREEI------GEAAF 470

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK ++++KDAIGR WQ GTIQVD+NLP+RF   Y    + K  PVMIHRA FGS+ERF
Sbjct: 471 YGPKLDFMVKDAIGRKWQLGTIQVDYNLPARFKLEYTAEDNTKKTPVMIHRAPFGSLERF 530

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             ++IE+  G+ PLWL+P Q  +  I+    +YA++++    S  +    D RNE I  K
Sbjct: 531 TAVLIEHTAGHFPLWLTPDQVAILPISEKYNDYAKQVSKYFDSVGVRAVIDDRNEKIGRK 590

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IR++ +K+IP ++I G+KEA+E  + +R+ G      + + +    +  E
Sbjct: 591 IRDNELKRIPYMVIVGEKEAAEGLVSMRKQGGGEQATMKMEEFANRINAE 640


>gi|183221772|ref|YP_001839768.1| threonyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
 gi|189911846|ref|YP_001963401.1| threonyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167776522|gb|ABZ94823.1| Threonine--tRNA ligase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167780194|gb|ABZ98492.1| Threonyl-tRNA synthetase (Threonine--tRNA ligase; ThrRS)
           [Leptospira biflexa serovar Patoc strain 'Patoc 1
           (Paris)']
          Length = 638

 Score =  613 bits (1581), Expect = e-173,   Method: Composition-based stats.
 Identities = 277/649 (42%), Positives = 407/649 (62%), Gaps = 21/649 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAI-NGKVCDLSD-PVREGSIE 60
           + + +T PDGS K      + SD  ++    L +KA+AV + +G+  DLS  P    +++
Sbjct: 2   AALTITLPDGSSKELESGKSFSDFVQNQLPFLKEKALAVVLSDGRTVDLSFVPTENTTVK 61

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG---FYYDFD-KEQPFSS 116
            +T +D     V  HS AH++  AVQ +WPE ++ +GP+IE+G   F+YD D  +   + 
Sbjct: 62  FLTFDDKEGKEVFHHSSAHLLGMAVQRLWPEARLTVGPVIENGPGFFFYDIDFGDLVITV 121

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
           D+L +IE +M +I+  D    +  LS E+A E F+ + E YKVE+++   A  +V+LY Q
Sbjct: 122 DDLPKIEAEMAKIVKEDLTVKRWELSKEEAIEKFKKENEPYKVELIQGFDA-ASVSLYGQ 180

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           GEW+DLCRGPHV  TGQ+K F KL  ++GAYW+GDS    L+RIYG ++ T++ L +Y++
Sbjct: 181 GEWYDLCRGPHVARTGQLKAF-KLTAISGAYWKGDSKNKQLTRIYGVSFPTKKLLDEYIF 239

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEIN 295
            +EE++KRDHRKL +E+DLF   ++  G  FWH KG  ++ TL SY+R +  +  Y+EI 
Sbjct: 240 LIEEAKKRDHRKLGKELDLFSFQDEAPGFPFWHPKGTVLWNTLASYIREECFRRGYQEIK 299

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP +L+  LW++SGHWD+++ NM+       T  D   FA+KPMNCPG   ++ + + SY
Sbjct: 300 TPAILNSSLWKKSGHWDNFKENMYF------TDIDESEFAVKPMNCPGCCLIYKYHMHSY 353

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP+R  E G+V+R+E SG LHGL RVR FTQDDAH++   +++ +E   I +    +Y
Sbjct: 354 RELPLRFMELGNVHRHEMSGVLHGLFRVRAFTQDDAHIYAPLDKVESEVEDIIDFTFDVY 413

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           K FGF +    ++TRPEK  GSD  W+ A   +   L       +  I  G+  G+GAFY
Sbjct: 414 KKFGFTEFKTFIATRPEKSQGSDEDWNLATQALHDALK------KKGIEYGIKEGDGAFY 467

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK E+ +KD++GR WQCGT+Q+DF++P+RF   +  S  +K  PVMIHRA++GS+ERFI
Sbjct: 468 GPKIEFNIKDSLGRLWQCGTVQIDFSMPNRFELDFTASDGKKHAPVMIHRAIYGSLERFI 527

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
           GI+IE+F+G  PLWL+P Q  V T+  +  +YA+E+   L      +E D RNE I  KI
Sbjct: 528 GILIEHFEGKFPLWLNPTQIRVLTVAETHSDYAKEVYQDLVMQGFRVELDVRNEKIGSKI 587

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R+  +K+    +I GDKE    SI  RR G  TT  VS    + +L  E
Sbjct: 588 RDSIMKRSSYTLILGDKEKEAGSISYRRMGEETTATVSRDGFLSLLKGE 636


>gi|157145208|ref|YP_001452527.1| hypothetical protein CKO_00941 [Citrobacter koseri ATCC BAA-895]
 gi|157082413|gb|ABV12091.1| hypothetical protein CKO_00941 [Citrobacter koseri ATCC BAA-895]
          Length = 652

 Score =  613 bits (1581), Expect = e-173,   Method: Composition-based stats.
 Identities = 302/651 (46%), Positives = 420/651 (64%), Gaps = 14/651 (2%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIE 60
              +  T PDGS+K+    AT  +VAESI  S+AK AV   I+GK  DL +  +  G + 
Sbjct: 11  SEPLTFTLPDGSLKHVRKGATLQNVAESIGSSVAKSAVYAEIDGKCVDLLEKAKNSGKLN 70

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           IIT  D  +L  IR  C  ++A +V+ ++P  ++  G + ++GFYYDF  ++PF+ D+L 
Sbjct: 71  IITVFDEEALGPIRRGCLLLLAASVKQLFPSARMVEGQLTKEGFYYDFAVDKPFTRDDLG 130

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IE+ M  +IA + P +K+ ++  +A + FE + E +K   L  I A ++VTL    ++ 
Sbjct: 131 MIEQHMTSLIAENPPIIKEQVTRAQAIDCFEQRGEKFKSTELMEILADKSVTLCHLRQFT 190

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           D   GP V     +K   KL+ V+GAYWRG++N   L RIYGTAW ++++L  +L    E
Sbjct: 191 DGFNGPLVPDLRFLKN-MKLLNVSGAYWRGEANNVQLQRIYGTAWASKKQLDGWLEKTAE 249

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQV 299
           +EKRDHRKL RE+DLFH  ++  G +FWH +GW IFQ+LI+YMR R     Y E+NTP V
Sbjct: 250 AEKRDHRKLGRELDLFHFQDNAPGAVFWHPRGWTIFQSLIAYMRSRHEVAGYVEVNTPDV 309

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           +D+ LW+ SGHWD+YR +MF  +      +D R FALKPMNCPG V++F +G+KSYR+LP
Sbjct: 310 MDRSLWEISGHWDNYRDHMFTTQ-----TEDGRNFALKPMNCPGAVSLFKYGIKSYRDLP 364

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           VRL+EFG V+R EPSGSLHGL+RVR FTQDDAH+FCT +Q+  EC  I  L++ IYK FG
Sbjct: 365 VRLSEFGKVHRYEPSGSLHGLLRVRHFTQDDAHIFCTLQQVEGECKSILQLVLDIYKQFG 424

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           FE++ +KLSTRPEKR+GSDA WD  EN +   L+         +   V  GEGAFYGPK 
Sbjct: 425 FEEVAIKLSTRPEKRMGSDADWDRLENALSASLEA------QGLQWSVNPGEGAFYGPKL 478

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           E++L+DAIGRDWQCGT+QVD NLP RF+  Y+        PVM+HRA+FGS+ERF GI++
Sbjct: 479 EFVLRDAIGRDWQCGTLQVDMNLPERFDIGYIAEDGSTKRPVMLHRALFGSLERFTGILL 538

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E++ G LP WLSP+QA+V TIT     YA+++   L+   L  E D RNE I + IRE +
Sbjct: 539 EHYVGKLPAWLSPVQAVVMTITDKQHHYAEQVLKALRKKGLRCEADLRNEKIGFIIREQT 598

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDC 650
           + +IP ++I GD E +   + +R         + L +A   +     PP+ 
Sbjct: 599 LARIPFLLIVGDAEENAARVTVRDRTGRCMGTLLLNEAADAIKICCQPPEV 649


>gi|325269899|ref|ZP_08136509.1| threonine--tRNA ligase [Prevotella multiformis DSM 16608]
 gi|324987872|gb|EGC19845.1| threonine--tRNA ligase [Prevotella multiformis DSM 16608]
          Length = 649

 Score =  613 bits (1581), Expect = e-173,   Method: Composition-based stats.
 Identities = 249/650 (38%), Positives = 393/650 (60%), Gaps = 19/650 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            +K+TFPDGS++ +    TG  +AESIS +LA+  V+  +NG   +L+ P+  + +I + 
Sbjct: 1   MVKITFPDGSVREYEQGVTGYQIAESISPALARDVVSCGVNGVTTELNRPINGDATIALY 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD--FDKEQPFSSDELA 120
             +D        H+ AH++AEA+Q ++P +Q   GP +E+GF+YD      Q  S ++  
Sbjct: 61  KFDDEEGKHTFWHTSAHLLAEALQELYPGIQFGFGPAVENGFFYDVMPADGQTISENDFP 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IE+KM+E+  ++ P ++  +S   A + F +  + YKVE +E       ++ Y QG + 
Sbjct: 121 KIEEKMRELAKKNEPVVRHDVSKADAIKEFTADGQEYKVEHIEQDLEDGTISTYTQGHFT 180

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ STG +K   K+  VAGA+WRGD+ R  ++RIYG  +  ++ L +YL  LEE
Sbjct: 181 DLCRGPHLVSTGAIK-AIKITSVAGAFWRGDAKREQMTRIYGITFPKKKMLDEYLVMLEE 239

Query: 241 SEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++KRDHRK+ +EM+LF  +   G G+  W  KG ++   L   +RR +   +Y+E+ TP 
Sbjct: 240 AKKRDHRKIGKEMELFMFSDRVGKGLPIWLPKGTQLRLRLQDLLRRLLRPYNYQEVITPG 299

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +  ++L+  SGH+  Y  + F       T ++   + LKPMNCP H  V+ +  +SY++L
Sbjct: 300 IGGKNLYVTSGHYAHYGKDSFQ---PIHTPEEDEEYMLKPMNCPHHCEVYAYKPRSYKDL 356

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG+V+R E SG LHGL RVR FTQDDAH+F   EQ+  E     ++I+ ++K F
Sbjct: 357 PLRIAEFGTVFRYEKSGELHGLTRVRTFTQDDAHIFVRPEQVKTEFETNIDIILKVFKTF 416

Query: 419 GFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           GF+    ++S R        +GSD +W+++E  +K   +      +  +   V LGE AF
Sbjct: 417 GFDNYEAQISLRDPNDKEKYIGSDEVWEESEAAIKQACE------EKGLKARVELGEAAF 470

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK ++++KDAIGR WQ GTIQVD+NLP+RF   Y    + K  PVMIHRA FGS+ERF
Sbjct: 471 YGPKLDFMVKDAIGRRWQLGTIQVDYNLPNRFKLEYTAEDNSKKTPVMIHRAPFGSLERF 530

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             ++IE+  G+ PLWL+P Q  +  I+    +YA ++   L +H++    D RNE I  K
Sbjct: 531 TAVLIEHTAGHFPLWLTPDQVAILPISEKYNDYAFKVKAYLDAHNVRSIMDDRNEKIGRK 590

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IR++ +K++P ++I G+KEA+E  + +R+ G      +++      +  E
Sbjct: 591 IRDNELKRVPYMVIVGEKEAAEGLVSMRQQGGGEQATMTMEAFAERINAE 640


>gi|315924324|ref|ZP_07920547.1| threonine--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263]
 gi|315622395|gb|EFV02353.1| threonine--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263]
          Length = 644

 Score =  613 bits (1581), Expect = e-173,   Method: Composition-based stats.
 Identities = 259/639 (40%), Positives = 388/639 (60%), Gaps = 13/639 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K+T  DG IK+F    +  ++A+S+S  LAKK +A  I+GK  DL   V  +  +  +T
Sbjct: 1   MKITLLDGDIKDFENGLSIYEMAKSLSMGLAKKVMAGMIDGKAVDLRTKVDHDCKVRFLT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D        HS +H+M +A++ +WP+ Q+ IGP +++GFYYD D E   + D+   IE
Sbjct: 61  FDDTEGKKAFWHSASHVMGQAIKRVWPDAQLTIGPAVDNGFYYDVDLEHAITPDDYPIIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M++I+  D P      S E+A    E + E YK E++E++P  E ++ Y QGEW DLC
Sbjct: 121 AEMKKIVKADYPIEYTVKSREEALAWAEKEHETYKTELIEALPEDETISFYGQGEWADLC 180

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+RSTGQ+K F K+M +AGAYW GD N  ML R+YG A+  +  L ++L  LEE++K
Sbjct: 181 AGPHIRSTGQIKAF-KIMSLAGAYWHGDENNKMLQRVYGVAFPKKSLLDEHLAKLEEAQK 239

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQ 302
           RDHRKL  ++DLF + +   G+ +W  KGWK+F TL+ + R    K  Y+EI++PQ+   
Sbjct: 240 RDHRKLGPQLDLFFLDDTAPGMPYWLPKGWKLFNTLLEFWRDEHEKRGYQEISSPQINYN 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+QSGHWD Y+ NMF +      + +   + +KPMNCP  + V+    +SYR+LP+RL
Sbjct: 300 KLWRQSGHWDHYKDNMFVI-----PVSENEIYGVKPMNCPNAIVVYKRKTRSYRDLPLRL 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           ++   ++R E SG LHGL+RV+ F QDD+H F T++Q+++E  +I ++    Y  FG E 
Sbjct: 355 SDCDVLHRKEKSGQLHGLLRVQMFRQDDSHNFITEDQIYDEINEILDIADLFYGIFGLEY 414

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
              +LSTRP   +G  ALWD AE  +K +LD             V  G+GAFYGPK + +
Sbjct: 415 -RPELSTRPADFMGDIALWDKAEAALKEILDKRYGEGG----YDVNEGDGAFYGPKIDIM 469

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +KDA+ R WQ GTIQVDF LP  F+  Y++   E   PVMIHR ++GS+ERFIG++IE+ 
Sbjct: 470 MKDALDRTWQMGTIQVDFQLPRNFDLTYMDKDGELKVPVMIHRVIYGSLERFIGLLIEST 529

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WLSP+Q  +  +     EYAQ IA+ L+ H + +E D R+  +  KI +   + 
Sbjct: 530 AGKFPFWLSPVQVGIVPVREFHNEYAQSIADQLRDHRIRVEVDDRDAQMGGKISKFRKEL 589

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           +P I+I GDKE    ++ +R         + +   + ++
Sbjct: 590 LPYILIVGDKEKEANAVSVRIRDGVQLHDIPVDAFLKVV 628


>gi|194206357|ref|XP_001491149.2| PREDICTED: similar to threonyl-tRNA synthetase-like 2 [Equus
           caballus]
          Length = 754

 Score =  613 bits (1581), Expect = e-173,   Method: Composition-based stats.
 Identities = 240/647 (37%), Positives = 357/647 (55%), Gaps = 23/647 (3%)

Query: 2   PSDIKLTFPDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
            + I +   DG          T   VA  IS+ LA+  V   +NG++ DL  P+  + ++
Sbjct: 111 SNVITVRVADGKTVEGEAWKTTPYQVAAEISQELAESTVVAKVNGELWDLDRPLEGDSTL 170

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDE 118
           E++  +   + AV  HS AHI+ EA++  +    +  GP IE+GFYYD   E +  SS E
Sbjct: 171 ELLMFDSEEAQAVYWHSSAHILGEAMELYYGGH-LCYGPPIENGFYYDMFIEDRAVSSTE 229

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L+ +E   + II     F +  +S E   E+F+  K  +K  IL         T+YR G 
Sbjct: 230 LSALEGMCKTIIKEKQAFERLEVSKEVLLEMFKYNK--FKCRILNEKVNTPTTTVYRCGP 287

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLC+GPHVR TG++K   K+ K +  YW G+     L RIYG ++   + +  +  F 
Sbjct: 288 LIDLCKGPHVRHTGKIK-AIKIFKNSSTYWEGNPEMETLQRIYGISFPDNKMMKNWEKFQ 346

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
           EE++ RDHRK+ +E +LF   +   G  F+  +G  I+ TL+ ++R +    ++ E+ +P
Sbjct: 347 EEAKNRDHRKIGKEQELFFFHDLSPGSCFFLPRGAFIYNTLMDFIREEYHQRNFTEVLSP 406

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  LW+ SGHW  Y  NMF      DT      FALKPMNCPGH  +F H  +S+RE
Sbjct: 407 NMYNSKLWEASGHWQHYSENMFTFDIEKDT------FALKPMNCPGHCLMFAHRPRSWRE 460

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           +P+R A+FG ++RNE SG+L GL RVR F QDDAH+FCT EQ+  E       + S+Y  
Sbjct: 461 MPIRFADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCTVEQIEEEIKGCLQFLQSVYST 520

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF   +  LSTRPE  +G   LWD+AE  ++  L       +      +  G+GAFYGP
Sbjct: 521 FGFSFQLN-LSTRPENFLGEIGLWDEAEKQLQNSLMEFGKPWK------MNPGDGAFYGP 573

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIG 536
           K +  +KDAIGR  QC TIQ+DF LP RFN  YV+    +K +PV+IHRA+ GS+ER I 
Sbjct: 574 KIDIKIKDAIGRYHQCATIQLDFQLPIRFNLTYVSKDGDDKKNPVIIHRAILGSVERMIA 633

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FRNETINYKI 595
           I+ EN+ G  P WLSP Q +V  +  +  +YA +++N         + D   + T+N KI
Sbjct: 634 ILSENYGGKWPFWLSPRQVMVIPVGPTCEKYALQVSNEFFEEGFMADVDLDHSCTLNKKI 693

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           R   + +   I++ G+KE +  ++ +R   +    ++S+  AI  L 
Sbjct: 694 RNAQLAQYNFILVVGEKEKTNNAVNVRTRDNKIHGEISVTSAIDKLK 740


>gi|328866339|gb|EGG14724.1| threonyl-tRNA synthetase [Dictyostelium fasciculatum]
          Length = 706

 Score =  613 bits (1580), Expect = e-173,   Method: Composition-based stats.
 Identities = 238/645 (36%), Positives = 366/645 (56%), Gaps = 22/645 (3%)

Query: 4   DIKLTFPDGSIK-NFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
            I +T PDG +   F    T  DVA+SISR LA   V+  +N +V D+S P+  + ++ +
Sbjct: 73  PISITLPDGKVVPGFKGKTTPYDVAKSISRGLADSIVSSIVNDQVHDISRPLEGDCNLSL 132

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELA 120
              +         HS AH++ +A++ ++   Q+ IGP  +DGFYYD    ++  SS++  
Sbjct: 133 CKFDSEAGKKTFWHSSAHVLGQALELVYGG-QLCIGPATQDGFYYDMATGDKLVSSEDYE 191

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            I++ + +I+A   PF +  +  + A E+F+  K  YK EI+  IPA++ V+LYR G   
Sbjct: 192 IIQEVVNKIVAEKQPFERLAVPRDLALEMFKYNK--YKTEIISKIPAEDTVSLYRCGTLV 249

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ +T  +K F K++K + AYW G +    L R+YG A+  ++++ +Y  F+EE
Sbjct: 250 DLCRGPHLPNTSYIKAF-KVVKNSSAYWLGKAENDPLQRVYGIAFPDKKQMEEYNKFMEE 308

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQV 299
           + KRDHR + +  +LF       G  F+   G +I+  L+ ++R +     + E+ TP +
Sbjct: 309 AAKRDHRNVGKAQELFFFHPYSPGCTFFLPHGTRIYNKLVEFIRFEYHRRGFSEVITPTM 368

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             Q LW+QSGHW  Y  NMF VKC      D   +++KPMNCPGH  +F    +SYRELP
Sbjct: 369 FSQSLWEQSGHWAKYSENMFPVKC------DNSNYSMKPMNCPGHCLMFASRSRSYRELP 422

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R A+FG ++RNE +G+L GL RVR F QDDAH+FCT  Q   E       +  +Y  FG
Sbjct: 423 IRFADFGVLHRNEMAGALTGLTRVRKFQQDDAHIFCTLAQTETEIKSCLEFMQHVYGIFG 482

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           FE  + +LSTRPE R+GSD +WD AE  ++  L       +      +  G+GAFYGPK 
Sbjct: 483 FEFSL-ELSTRPENRLGSDEMWDKAEKSLEVALTNFGKPWK------LNPGDGAFYGPKI 535

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK-CHPVMIHRAVFGSIERFIGIM 538
           +  + D + R  QC TIQ+DF LP RF   Y+   +E    PV+IHRA+ GS+ER + I+
Sbjct: 536 DIHITDVLKRSHQCATIQLDFQLPIRFELEYMTDKAEDLQRPVIIHRAILGSVERMMAIL 595

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+  G  P W+SP QAI+  ++    EYA ++   +       + D  ++T+  K+RE 
Sbjct: 596 IEHTGGKWPFWVSPRQAIIVPVSQQFNEYADQLQKKIVDAGFYCDVDGSDKTLPKKVREA 655

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            + +   I++ G KE  E ++G+R   +     +SL   +    +
Sbjct: 656 QLAQYNYILVVGQKEKDENTVGVRTRDNVVRDAISLDALLAEFDQ 700


>gi|302346317|ref|YP_003814615.1| threonine--tRNA ligase [Prevotella melaninogenica ATCC 25845]
 gi|302150675|gb|ADK96936.1| threonine--tRNA ligase [Prevotella melaninogenica ATCC 25845]
          Length = 649

 Score =  613 bits (1580), Expect = e-173,   Method: Composition-based stats.
 Identities = 246/650 (37%), Positives = 395/650 (60%), Gaps = 19/650 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            +K+TFPDGS++ +    TG  +AESIS +LA+  V+  +NG+  +L+ P+  + +I + 
Sbjct: 1   MVKITFPDGSVREYEQGVTGFQIAESISPALARDVVSCGVNGETTELNRPINEDATIALY 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD--FDKEQPFSSDELA 120
             +D        H+ AH++AEA+Q ++P +Q   GP +E+GF+YD    + Q  S ++  
Sbjct: 61  KFDDEEGKHTFWHTSAHLLAEALQELYPGIQFGFGPAVENGFFYDVMPAEGQTISENDFP 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IE+KM+E+  ++   +++ +S   A + F +  + YKVE +        ++ Y QG + 
Sbjct: 121 KIEEKMRELAKKNEQVVRRDVSKADAVKEFTADGQEYKVEHIVEDLEDGTISTYSQGNFT 180

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ STG +K   K+  VAGA+WRGD+ R  ++RIYG  +  ++ L +YL  LEE
Sbjct: 181 DLCRGPHLVSTGAIK-AVKITSVAGAFWRGDAKREQMTRIYGITFPKKKMLDEYLEMLEE 239

Query: 241 SEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++KRDHRK+ +EM+LF  +   G G+  W  KG ++   L   +RR +   +Y+E+ TP 
Sbjct: 240 AKKRDHRKIGKEMELFMFSDRVGKGLPIWLPKGTQLRLRLQELLRRLLRPYNYQEVITPG 299

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +  ++L+  SGH+  Y  + F       T ++   + LKPMNCP H  ++ H  +SY++L
Sbjct: 300 IGGKNLYVTSGHYAHYGKDAFQ---PIHTPEEDEEYMLKPMNCPHHCEIYAHKPRSYKDL 356

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG+V+R E SG LHGL RVR FTQDDAH+F   +Q+  E     ++I+ ++K F
Sbjct: 357 PLRIAEFGTVFRYEKSGELHGLTRVRTFTQDDAHIFVRPDQVKAEFENNIDIILKVFKTF 416

Query: 419 GFEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           GF+    ++S R      K +GSD +W+++E  +K         ++  +N  V LGE AF
Sbjct: 417 GFDNYEAQISLRDPEDKEKYIGSDEVWEESEAAIKEA------CAEKGLNARVELGEAAF 470

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK ++++KDAIGR WQ GTIQVD+NLP+RF   Y    + K  PVM+HRA FGS+ERF
Sbjct: 471 YGPKLDFMVKDAIGRRWQLGTIQVDYNLPNRFKLEYTAEDNSKKTPVMVHRAPFGSLERF 530

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             ++IE+  G+ PLWL+P Q  +  I+    +YA+++     +H +    D RNE I  K
Sbjct: 531 TAVLIEHTAGHFPLWLTPDQVAILPISEKYNDYARKVKAYFDAHDVRSIMDDRNEKIGRK 590

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IR++ +K++P ++I G+KEA+E  + +R+ G      +++      +  E
Sbjct: 591 IRDNELKRVPYMVIVGEKEAAEGLVSMRQQGGGEQATMTMEAFAERINNE 640


>gi|163788630|ref|ZP_02183075.1| N-acetylmuramic acid-6-phosphate etherase [Flavobacteriales
           bacterium ALC-1]
 gi|159875867|gb|EDP69926.1| N-acetylmuramic acid-6-phosphate etherase [Flavobacteriales
           bacterium ALC-1]
          Length = 646

 Score =  612 bits (1579), Expect = e-173,   Method: Composition-based stats.
 Identities = 250/648 (38%), Positives = 391/648 (60%), Gaps = 20/648 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            IK+T PDGS+++F    T  +VA  IS   A+  ++   +  V + + P+  +GS+ + 
Sbjct: 1   MIKITLPDGSVRSFEKEVTPHEVAVDISEGFARNVISAKFDDTVVETTTPLTTDGSLTLY 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
           T  D        HS AH++A+A++ ++P+V++ +GP I++GFYYD D  E   S  +   
Sbjct: 61  TFRDDEGKKAFWHSSAHVLAQALEELYPDVKLWVGPAIDNGFYYDVDLGEGVISEKDFKT 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE KM EI      F  + +S  +A   ++SK   YKV+++E +     ++      + D
Sbjct: 121 IENKMIEIARGKHDFKMRDVSKAEALSYYKSKNN-YKVDLIEGL-EDGTISFCDHSTFTD 178

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG H+ +TG +K   K++ VAGAY++GD N   L+R+YG ++  Q+ELT++L+ LEE+
Sbjct: 179 LCRGGHIPNTGIIK-AVKILSVAGAYYKGDENEKQLTRVYGVSFPKQKELTEHLHLLEEA 237

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           +KRDHRKL +E++LF  ++    G+  W  KG  + + L ++++  + K  YE + TP +
Sbjct: 238 KKRDHRKLGKELELFTFSQKVGQGLPLWLPKGAALRERLENFLKAAQKKAGYEMVVTPHI 297

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             + L+  SGH+  Y  + F       T K+   F LKPMNCP H  ++N+   SY+ELP
Sbjct: 298 GQKELYVTSGHYAKYGEDSFQ---PIKTPKEDEEFLLKPMNCPHHCEIYNNKPYSYKELP 354

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
            R AEFG+VYR E SG LHGL RVRGFTQDDAH+FCT +Q+  E  ++ +L++ ++   G
Sbjct: 355 KRFAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCTPDQLDAEFKEVIDLVLYVFGSLG 414

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           FE    ++S R  +     +G +  W  AE+ +      +  +    +N  V  GE AFY
Sbjct: 415 FEDFTAQVSLRDPESPDKYIGDEEHWKKAEDAI------LNAAIDKGLNYVVETGEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +++++DA+GR WQ GTIQVD+ LP RF+  Y  S +E   PVMIHRA FGS+ERFI
Sbjct: 469 GPKLDFMVRDALGRQWQLGTIQVDYTLPERFDLTYKGSDNELHRPVMIHRAPFGSMERFI 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            I++E+  GN PLWL P QAI+ +I+    +YA+++ NLL++  +    D RNET+  KI
Sbjct: 529 AILLEHTGGNFPLWLMPEQAIIISISEKYEKYAEKVLNLLENDEIRALADNRNETVGKKI 588

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           RE  ++K P +II G++EA + +I +R+ G      +++ D + I+  
Sbjct: 589 REAEMQKFPFMIIVGEQEAQDNTITVRQHGGEDLGTITVKDFVNIVKD 636


>gi|218886086|ref|YP_002435407.1| threonyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|226701453|sp|B8DPN2|SYT_DESVM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|218757040|gb|ACL07939.1| threonyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 644

 Score =  612 bits (1579), Expect = e-173,   Method: Composition-based stats.
 Identities = 273/649 (42%), Positives = 398/649 (61%), Gaps = 21/649 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAE-SISRSLAKKAVAVAINGKVCDLSDPVREGS--IEI 61
           + +T   G + +     +  D  + ++S    K  VA   NG   DL+  V   +  IE 
Sbjct: 1   MNVTIE-GQVFDVQSGVSCRDALKGALSGKKFKNVVACRCNGTPLDLTATVPADTTTIEP 59

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +  + P  + +IRHS AHIMAEAVQ ++P V+V IGP I+ GFYYDFD E+PFS D+L  
Sbjct: 60  VFADSPEGIELIRHSAAHIMAEAVQKLFPGVKVTIGPAIDSGFYYDFDYERPFSVDDLEA 119

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE +MQ+I+A   PF +  ++ ++A  LFE   EAYKVEI+  IPA   V++YR G++ D
Sbjct: 120 IEAEMQKIVAAAHPFTRTEMTKDEAVALFEGMGEAYKVEIVRDIPAD-TVSVYRSGDFVD 178

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+  T  VK F KL+ VAGAYWRGD    MLSR+YGTA+   + L  +L+ +EE+
Sbjct: 179 LCRGPHIPDTSFVKAF-KLLSVAGAYWRGDEKNRMLSRVYGTAFADPKALKDHLHQIEEA 237

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQV 299
           ++RDHRKL +++DLF   ED   G+++WH KG  +   L  ++R   +K  YE +  PQ+
Sbjct: 238 KRRDHRKLGQQLDLFAFHEDVAPGMVYWHPKGMLLRTILEDFLRKEHLKRGYELVQGPQL 297

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           L + +W++SGH+D+YR NM+       T+ D   + +KPMNC  H+ ++   L+SYR+LP
Sbjct: 298 LRREVWEKSGHYDNYRENMYF------TVIDDNAYGVKPMNCVSHMLIYKSHLRSYRDLP 351

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
            R+ E G V+R+E SG LHGL+RVR FTQDDAH+ C  +Q+  E + +  L+  +   FG
Sbjct: 352 RRMFELGVVHRHEKSGVLHGLLRVRQFTQDDAHILCRPDQLEAEIIGVIALVRDLMGLFG 411

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F+   + +STRPEK +GSD  WD A N + G + T   S        +  G+GAFYGPK 
Sbjct: 412 FDY-RIVISTRPEKSIGSDEDWDRATNALIGAVATAGLSH------TINEGDGAFYGPKI 464

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +  + DAIGR+WQ  TIQVDF LP RF+  Y+    E+  PVM+HRA+ GS+ERFIG++ 
Sbjct: 465 DIKVTDAIGREWQLSTIQVDFTLPDRFDLVYIGQDGERHRPVMVHRAILGSLERFIGVLT 524

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E+F G  P W+ P+QA + T+T +  ++A    + L +  L +E D RNE + YK+RE  
Sbjct: 525 EHFAGAFPTWIVPVQARLLTVTDAQNDFAMGARDQLVAAGLRVEADTRNEKLGYKVREAQ 584

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
           ++KIP I++ GDKE     + +R          +L +   ++  +   P
Sbjct: 585 LEKIPYILVVGDKEVEAGGVNVRLRNGENLGLKTLAEVAEMIRADCQEP 633


>gi|30690426|ref|NP_198035.2| threonyl-tRNA synthetase / threonine--tRNA ligase (THRRS)
           [Arabidopsis thaliana]
 gi|27735258|sp|O04630|SYTM_ARATH RecName: Full=Threonyl-tRNA synthetase, mitochondrial; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS; Flags:
           Precursor
 gi|332006227|gb|AED93610.1| threonyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 709

 Score =  612 bits (1579), Expect = e-173,   Method: Composition-based stats.
 Identities = 239/650 (36%), Positives = 369/650 (56%), Gaps = 24/650 (3%)

Query: 3   SDIKLTFPDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIE 60
             IK+T PDG++K       T  D+A  IS+ LA  A+  A++  + D++ P+  +  +E
Sbjct: 73  DPIKVTLPDGNVKEGKKWETTPMDIAAQISKGLANSALISAVDDVLWDMNRPLEGDCKLE 132

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII--EDGFYYD-FDKEQPFSSD 117
           +   +  +    + HS AHI+ +A++  +   Q+ IGP     +GFYYD F  E   S +
Sbjct: 133 LFKFDSDKGRDTLWHSSAHILGQALEQEY-GCQLCIGPCTTRGEGFYYDGFYGELGLSDN 191

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
               IE    +      PF +  ++ ++A E+F      +KVE++  +PA   +T+YR G
Sbjct: 192 HFPSIEAGAAKAAKEAQPFERIEVTKDQALEMFSENN--FKVELINGLPADMTITVYRCG 249

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
              DLCRGPH+ +T  VK F K ++ + AYW+GD +R  L R+YG ++  Q++L +YL F
Sbjct: 250 PLVDLCRGPHIPNTSFVKAF-KCLRASSAYWKGDKDRESLQRVYGISYPDQKQLKKYLQF 308

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINT 296
           LEE++K DHR L ++ +LF   +   G  F+   G +++  L+ +++ +     Y E+ T
Sbjct: 309 LEEAKKYDHRLLGQKQELFFSHQLSPGSYFFLPLGTRVYNRLMDFIKNQYWHRGYTEVIT 368

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P + +  LWQ SGH D+Y+ NMF          + + F LKPMNCPGH  +F H ++SYR
Sbjct: 369 PNMYNMELWQTSGHADNYKDNMFTFNI------EKQEFGLKPMNCPGHCLIFQHRVRSYR 422

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ELP+RLA+FG ++RNE SG+L GL RVR F QDDAH+FCT EQ+  E   +   I  +YK
Sbjct: 423 ELPMRLADFGVLHRNEASGALSGLTRVRRFQQDDAHIFCTTEQVKGEVQGVLEFIDYVYK 482

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
            FGF   + KLSTRPEK +G    WD AE  +K  ++             +  G+GAFYG
Sbjct: 483 VFGFTYEL-KLSTRPEKYLGDLETWDKAEADLKEAIEAFGKP------LVLNEGDGAFYG 535

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC-HPVMIHRAVFGSIERFI 535
           PK +  + DA+ R +QC T+Q+DF LP RFN  Y      K   PVMIHRAV GS+ER  
Sbjct: 536 PKIDITVSDAMNRKFQCATLQLDFQLPIRFNLEYAAEDEAKKSRPVMIHRAVLGSVERMF 595

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            I++E++KG  P W+SP QAIV  I+  + +YA+++   +K     ++ D  +  I+ K+
Sbjct: 596 AILLEHYKGKWPFWISPRQAIVCPISEKSQQYAEKVQKQIKDAGFYVDADLTDRKIDKKV 655

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           RE  + +   I++ G+ EA+   + +R   +      S+ D +     ++
Sbjct: 656 REAQLAQYNYILVVGETEAATGQVSVRVRDNAAHSVKSIEDLLEEFKAKT 705


>gi|325848534|ref|ZP_08170194.1| threonine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
 gi|325480762|gb|EGC83819.1| threonine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
          Length = 641

 Score =  612 bits (1578), Expect = e-173,   Method: Composition-based stats.
 Identities = 254/646 (39%), Positives = 394/646 (60%), Gaps = 18/646 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEII 62
            IK+  PD S+K +    +  DV + IS  L + AV   +NGKV   ++P+ E S  +++
Sbjct: 1   MIKIKLPDESVKEYEKGVSVGDVTKDISEGLFRSAVGAVVNGKVMGYAEPINEDSDFKVV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
             ED     +  H+ +H+MA A++ +WPE + AIGP I++GFYYD D E  F  ++L +I
Sbjct: 61  KFEDKEGKEIFWHTSSHVMAAAIKEMWPEAKFAIGPAIDNGFYYDIDLEHRFVPEDLPKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE--WF 180
           E KM+EI  +D   +++ +S  +A E F+ + + YKVE++E +P  E +TLY  G+  + 
Sbjct: 121 EAKMKEIAKKDLKMIRKEISRAEALEYFKKENQEYKVELIEDLPEDEIITLYEMGDDVFV 180

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLC+GPH+ ST  +K   KL  +AGAYWRGDS+R ML RIYG ++  +++L +Y+   EE
Sbjct: 181 DLCKGPHLLSTKAIK-AVKLNSIAGAYWRGDSDRKMLQRIYGISFEKKKQLDEYIKLQEE 239

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQV 299
           +++RDHR++ +EM+LF   E+  G  F+   G  +   L+++    + +  Y EI TP +
Sbjct: 240 AKRRDHRRIGKEMNLFSFHEEAPGFPFFKENGMILRHELLNWWTDVLAENGYGEIQTPLI 299

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           +++ LW +SGHWD Y+ NM+  K       D   +A+KPMNCPG V V+     SYR+LP
Sbjct: 300 MNEELWHRSGHWDHYKENMYFTKI------DGENYAVKPMNCPGSVLVYGEEPHSYRDLP 353

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +RLAE+G V+R+E SG+LHGL RVR FTQDDAHV+C   Q+ +E  K+ +L   +Y  FG
Sbjct: 354 IRLAEYGQVHRHELSGALHGLFRVRTFTQDDAHVYCLPSQVKDEVFKMIDLADLLYSTFG 413

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F+  + +LSTRP+  +G    WD AE  ++  L       +  I+  +   +GAFYGPK 
Sbjct: 414 FKYKI-ELSTRPDDFMGKIEEWDFAEKALEDALK------ERGIDYQINPKDGAFYGPKI 466

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           ++ L+DA  R WQCGTIQ+DF LP  F+  Y++ + EK  PVM+HRA+ GS+ERFIG + 
Sbjct: 467 DFHLEDAAKRTWQCGTIQLDFQLPQNFDLTYIDENGEKKRPVMLHRALLGSVERFIGSVT 526

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E F G  PLW++P Q  +  ++    ++A ++A  +K     ++ D R+E + YKIR+  
Sbjct: 527 EQFAGRFPLWINPKQVAIIPVSDKFADFADDLAKKIKKAGYRVDVDHRSEGVGYKIRQAQ 586

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           + +   +++ G+ E     + +R      T+ VS  + I  L +E 
Sbjct: 587 LMRTNYMLVVGENEEKSGKLTVRNRDGEETKDVSFEEFIEKLNQER 632


>gi|73951037|ref|XP_536172.2| PREDICTED: similar to threonyl-tRNA synthetase-like 2 isoform 1
           [Canis familiaris]
          Length = 802

 Score =  612 bits (1578), Expect = e-173,   Method: Composition-based stats.
 Identities = 241/648 (37%), Positives = 357/648 (55%), Gaps = 23/648 (3%)

Query: 2   PSDIKLTFPDGSIKNFPVHAT-GSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
            + I +    G      V  T    VA  IS  LA+  V   +NG++ DL  P+  + ++
Sbjct: 159 SNVITVRMAGGKTVEGEVWTTTPYQVAAEISPELAESTVVAKVNGELWDLDRPLEGDSTL 218

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDE 118
           E++T ++  + AV  HS AHI+ EA++  +    +  GP IE+GFYYD   E +  SS E
Sbjct: 219 ELLTFDNEEAQAVYWHSSAHILGEAMELYYGGH-LCYGPPIENGFYYDMFIEDRAVSSTE 277

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L+ +E   + II    PF +  +S E   E+F+     +K  IL         T+YR G 
Sbjct: 278 LSALENICKTIIKEKQPFERLEISKEVLLEMFKY--NKFKCRILNEKVHTSTTTVYRCGP 335

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLC+GPHVR TG++K   K+ K +  YW G+     L RIYG ++   + +  +  F 
Sbjct: 336 LIDLCKGPHVRHTGKIK-AIKIFKNSSTYWEGNPEMETLQRIYGISFPDNKMMKTWEKFQ 394

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE++ RDHRK+ +E +LF   +   G  F+  +G  I+ TL+ ++R +    ++ E+ +P
Sbjct: 395 EEAKNRDHRKVGKEQELFFFHDLSPGSCFFLPRGAFIYNTLMDFIREEYHRRNFTEVLSP 454

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  LW+ SGHW  Y  NMF      DT      FALKPMNCPGH  +F H  +S+RE
Sbjct: 455 NMFNSKLWETSGHWQHYSENMFTFDIEKDT------FALKPMNCPGHCLMFAHRPRSWRE 508

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           +PVRLA+FG ++RNE SG+L GL RVR F QDDAH+FCT EQ+  E       + S+Y  
Sbjct: 509 MPVRLADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCTVEQIEEEIKGCLQFLQSVYST 568

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF   +  LSTRPE  +G   LWD+AE  ++  L       +      +  G+GAFYGP
Sbjct: 569 FGFSFQLN-LSTRPENFLGEVELWDEAEKQLQNSLVEFGKPWK------MNPGDGAFYGP 621

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH-PVMIHRAVFGSIERFIG 536
           K +  +KDAIGR  QC TIQ+DF LP RFN  YV+   +    PV+IHRA+ GS+ER I 
Sbjct: 622 KIDIKIKDAIGRYHQCATIQLDFQLPIRFNLTYVSKDGDDKRNPVIIHRAILGSVERMIA 681

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FRNETINYKI 595
           I+ EN+ G  P WLSP Q +V  +  +  +YA ++++         + D   + T+N KI
Sbjct: 682 ILSENYGGKWPFWLSPRQVMVIPVGPTCEKYALQVSSAFFEEGFMADVDLDHSCTLNKKI 741

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           R   + +   I++ G+KE +  ++ +R   +    ++S+  AI  L  
Sbjct: 742 RNAQLAQYNFILVVGEKEKTNNAVNVRTRDNKIHGEISVTSAIHKLKN 789


>gi|51245280|ref|YP_065164.1| threonyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
 gi|50876317|emb|CAG36157.1| probable threonyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
          Length = 657

 Score =  612 bits (1578), Expect = e-173,   Method: Composition-based stats.
 Identities = 270/648 (41%), Positives = 404/648 (62%), Gaps = 18/648 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESI-SRSLAKKAVAVAINGKVCDLSDPV-REGSIE 60
           SDI +T  DG     P+  T  +V  ++ S    K+ VA  +NG+V D + P+  + ++ 
Sbjct: 17  SDITVTIADGESTQVPISTTVGEVFVALQSNKQRKRTVAAILNGEVVDFNTPLSTDCTLS 76

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWP-EVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            +T + P +L+V+RHS AHIMA AV+ I+  +V+VAIGP +++GFYYDF +  PF+ ++ 
Sbjct: 77  PVTIDSPEALSVLRHSTAHIMAHAVRDIYGSDVKVAIGPSVDNGFYYDFLRSDPFTPEDF 136

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IE +M EI+   S F K   S  +A   FE ++E YKVE+++ +   E V++Y  G++
Sbjct: 137 EKIEARMLEIVRTGSLFEKTLYSSAEAIARFEKEEEKYKVELIQDL-DVEEVSIYTVGDF 195

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPH+ ST  +  F KL++VAGAYWRGD  + +L RIYGTA+   + L ++L  +E
Sbjct: 196 ADLCRGPHLPSTSFIGAF-KLLRVAGAYWRGDEKKDVLQRIYGTAFFDSKALRKHLNNIE 254

Query: 240 ESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTP 297
           E++KRDHRKL +E++LF + +  G G+  W  KG ++   +  + +    + DYE + TP
Sbjct: 255 EAKKRDHRKLGKELELFTMQDSIGPGLPLWLPKGARMRHQIEEFWKAEHYRHDYELLYTP 314

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +  Q LW+ SGH D Y  +M+A         D  T+ +KPMNCP HV V+    +SYR+
Sbjct: 315 HIARQDLWKTSGHLDFYADSMYAGMDI-----DGVTYQIKPMNCPFHVGVYKAKKRSYRD 369

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
            P+R  E G+VYR E +G+LHGLMRVR FTQDDAH+FC  EQ+ +E   I +  + I K 
Sbjct: 370 FPLRWCELGTVYRYERAGALHGLMRVRSFTQDDAHIFCRPEQLEDEIFNILDFNLFILKS 429

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF +  + LSTRPEK VG+D  WD + N +K  L+      +  +   +  GEG FYGP
Sbjct: 430 FGFSEYDIYLSTRPEKSVGTDENWDKSTNALKLALE------KKGLKYEIDPGEGVFYGP 483

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  +KD +GR WQC T+QVDFNLP RF   YV S + +  P+MIHRA+ GS+ERFIG+
Sbjct: 484 KIDIKIKDQLGRSWQCSTVQVDFNLPERFELSYVGSDNSEHQPIMIHRALMGSLERFIGV 543

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE+  G  PLW SP+QA +  IT   +EY +++   L++  + +E D RNE +NYKIRE
Sbjct: 544 LIEHHAGAFPLWFSPVQARILNITDDQIEYGEKVYAELRAADIRVEKDLRNEKLNYKIRE 603

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
             + K P ++I GDKE  + ++ +R         +++ + + ++ +E 
Sbjct: 604 AQLVKTPYMLIIGDKEKEDGTVTVRMRNGKNLDPMTVQEFVALVLEEC 651


>gi|256830760|ref|YP_003159488.1| threonyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
 gi|256579936|gb|ACU91072.1| threonyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
          Length = 644

 Score =  612 bits (1577), Expect = e-173,   Method: Composition-based stats.
 Identities = 276/642 (42%), Positives = 400/642 (62%), Gaps = 20/642 (3%)

Query: 12  GSIKNFPVHATGSDVAES-ISRSLAKKAVAVAINGKVCDLSDPVREGS--IEIITPEDPR 68
           G         T +DV  + +S    K AVA   +G + DL+ PV  G+  +E +  E   
Sbjct: 6   GQDVEVQAGQTCADVLRAVLSGKKMKSAVACVCDGALLDLARPVPAGTAVMEPVFLESAE 65

Query: 69  SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQE 128
            L+V+RHS AH+MAEAV+ ++P  +V IGP +E GFYYDFD E+PF+ ++L +IE +M  
Sbjct: 66  GLSVLRHSAAHVMAEAVKELFPSAKVTIGPDVESGFYYDFDFERPFTPEDLEKIEARMTA 125

Query: 129 IIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
            +  + PF ++ +S  +AR LF S  E YK+EI++ + A + V+LYR G + DLCRGPH+
Sbjct: 126 SVVANQPFSREEMSAVEARALFASMGETYKLEIIDDLGADQ-VSLYRHGNFVDLCRGPHL 184

Query: 189 RSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRK 248
            STG ++   KL  VAGAYWRGDS RPML RIYGTA+ T +EL  +L  +EE++KRDHRK
Sbjct: 185 PSTGFLQ-AVKLTSVAGAYWRGDSKRPMLQRIYGTAFATPKELKAHLAMIEEAKKRDHRK 243

Query: 249 LAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQ 306
           L  ++DLF   E G  G+ +WH KG  +   L  ++ +++ +  Y  + TPQ+L + LW+
Sbjct: 244 LGPQLDLFSFHERGGAGMAYWHPKGGLVRTILEDFVNKEMIRRGYGIVRTPQILKRDLWE 303

Query: 307 QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFG 366
            SGH+ +YR NM+       T  D   + +KPMNC  H+ ++N   +SYR+LPVRL EFG
Sbjct: 304 TSGHYANYRENMYF------TEIDEVPYGVKPMNCVAHMLIYNTSQRSYRDLPVRLFEFG 357

Query: 367 SVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK 426
            V+R+E SG LHGLMRVR FTQDDAH+ C  +Q+ +E   +   I  +   FGFE  M +
Sbjct: 358 VVHRHELSGVLHGLMRVRQFTQDDAHIICRPDQLLDEIKGVMTWIQDLMGVFGFEYSM-E 416

Query: 427 LSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDA 486
           +STRPEK +GSDA W+ A + +   +       Q  +   +  G+GAFYGPK +  L+D 
Sbjct: 417 ISTRPEKSIGSDADWERATSALMDAM------GQMELPYTINEGDGAFYGPKIDVKLRDC 470

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNL 546
           +GR WQC TIQVDF LP RF+  YV    E+  PVM+HRA+ GS+ERFIGI+ E+F G  
Sbjct: 471 LGRQWQCSTIQVDFTLPDRFDLLYVGEDGERHRPVMVHRAIMGSVERFIGILTEHFAGAF 530

Query: 547 PLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPII 606
           P WL+P+QA + T+T +  E+A++  + L+   + +E D RNE + YK+RE  ++K+P  
Sbjct: 531 PAWLAPVQARILTVTDNHDEFARKCQDALQREGVRVELDLRNEKLGYKVREAQMEKVPYA 590

Query: 607 IICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
           ++ GD+E  +  + +R  G      +S+      L +E   P
Sbjct: 591 LVIGDQEVEQACVNVRMLGGNNLGVMSVDAFADHLRQECEKP 632


>gi|116328741|ref|YP_798461.1| threonine--tRNA ligase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116331652|ref|YP_801370.1| threonine--tRNA ligase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|122280605|sp|Q04R58|SYT_LEPBJ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|122283474|sp|Q04ZG7|SYT_LEPBL RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|116121485|gb|ABJ79528.1| Threonine--tRNA ligase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116125341|gb|ABJ76612.1| Threonine--tRNA ligase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 639

 Score =  612 bits (1577), Expect = e-173,   Method: Composition-based stats.
 Identities = 277/646 (42%), Positives = 405/646 (62%), Gaps = 21/646 (3%)

Query: 6   KLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGK-VCDLSDPVR-EGSIEIIT 63
           +LT PD S+K   + +T  D  E     L  KA+AV +NGK + DLS  V  + +IE++T
Sbjct: 3   QLTLPDKSVKKVALGSTYRDFIEKELPFLKNKALAVRLNGKDIQDLSRVVETDANIEVLT 62

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG---FYYDFDKEQPF-SSDEL 119
             +       +HS AH++  AVQ+++    + +GP+IE+G   FYYD D +    + ++ 
Sbjct: 63  YTEKAGWETFQHSAAHLLGMAVQNLYKNANLTVGPVIENGPGFFYYDIDFQGTIITPEDF 122

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IE +M+ I+  D    ++ +  ++A E F+   E YK+EI+  I ++E V++Y  GEW
Sbjct: 123 PKIEAEMERIVKADYTVWRKVVPKKEAIETFQKLGEKYKIEIIGGILSEE-VSIYGMGEW 181

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           FDLCRGPHV ++G +K F KL  ++GAYW+ D +  ML+RIYG A+ +++EL QYL+ +E
Sbjct: 182 FDLCRGPHVSNSGILKSF-KLTAISGAYWKADKDNAMLTRIYGVAFPSKKELDQYLFQIE 240

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E++KRDHRK+ +E+DLF   ++G G  FWH KG  ++ +L  Y+R +     Y+EI TP 
Sbjct: 241 EAKKRDHRKIGKELDLFSFQKEGPGFPFWHPKGTILWNSLADYLRAECNKRGYQEIKTPA 300

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           VL   LW++SGHWD++  NM+       T  D   +ALKPMNCPG   ++ H L SYREL
Sbjct: 301 VLSSELWKKSGHWDNFHENMYF------TDIDEEDYALKPMNCPGCSLIYKHHLHSYREL 354

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R AEFGSV+R+E  G LHGL RVR FTQDD+H++   E + +E   I +   ++YK F
Sbjct: 355 PLRFAEFGSVHRHELHGVLHGLFRVRAFTQDDSHIYAPLEHLESEVTDIIDFTFTVYKKF 414

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF +    ++TRPEK  G D  W+ A N +K  L+      +  I  G+  GEGAFYGPK
Sbjct: 415 GFSEFKTFIATRPEKSQGRDEDWEFATNTLKQSLE------KKGIPYGIKEGEGAFYGPK 468

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ +KD+IGR WQCGTIQVDF++P RF   Y +S  +K  PVMIHRA++GS+ERFIGI+
Sbjct: 469 IEFNIKDSIGRLWQCGTIQVDFSMPERFELDYTDSDGQKKRPVMIHRAIYGSLERFIGIL 528

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+++G  PLW+SP Q  + TIT    EYA+++   L      +E D RNE I  KIR+ 
Sbjct: 529 IEHYEGKFPLWISPNQIRILTITEKVAEYAKDVYCELVDAGFRVELDTRNEKIGAKIRDS 588

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            +KK   ++I G+KE    ++ +R+ G   T+ ++    I  L  E
Sbjct: 589 ILKKANYLLILGEKEMESGTLAVRKRGQEDTKTLTRSGFISNLQDE 634


>gi|150024985|ref|YP_001295811.1| threonine--tRNA ligase [Flavobacterium psychrophilum JIP02/86]
 gi|166223340|sp|A6GY22|SYT_FLAPJ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|149771526|emb|CAL42995.1| Threonine--tRNA ligase [Flavobacterium psychrophilum JIP02/86]
          Length = 648

 Score =  612 bits (1577), Expect = e-173,   Method: Composition-based stats.
 Identities = 255/651 (39%), Positives = 383/651 (58%), Gaps = 23/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            IK+T PDGSIK F    T  DVA+SIS  LA+  ++ A N    ++S  +  +GS+ + 
Sbjct: 1   MIKITLPDGSIKEFENGVTPMDVAKSISEGLARNVISAAFNNITVEISTELTTDGSLVLY 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
           T  D        HS +H+MA+ ++ ++P +++ +GP I++GFYYD D  +      +  +
Sbjct: 61  TWNDKDGKKAFWHSTSHVMAQVLEEMYPGLKLTLGPAIDNGFYYDVDFGDTKIVEADFKK 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE ++ EI      F  + ++   A EL++     YK E++ ++     +T      + D
Sbjct: 121 IESRILEISKEKHEFKLRPVTKADALELYK--DNEYKFELISNL-EDGTITFCDHATFTD 177

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG H+ +TG +K   K+M +AGAYWRGD     L+R+YGT++  Q++LT YL  LEE+
Sbjct: 178 LCRGGHIPNTGIIK-AVKIMSIAGAYWRGDEKNKQLTRVYGTSFPKQKDLTDYLELLEEA 236

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           ++RDHRKL +E++LF  ++    G+  W  KG  +   L  ++++ + K  YE++ TP +
Sbjct: 237 KRRDHRKLGKELELFAFSQKVGQGLPLWLPKGAALRDRLEQFLKKAQKKGGYEQVVTPHI 296

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             + L+  SGH+  Y A+ F       T  +   F LKPMNCP H  ++N    SY++LP
Sbjct: 297 GQKELYVTSGHYAKYGADSFQ---PISTPTEGEEFLLKPMNCPHHCEIYNVRPWSYKDLP 353

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
            R AEFG+VYR E SG LHGL RVRGFTQDDAH+FCT +Q+  E  K+ +L++ ++   G
Sbjct: 354 KRYAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCTPDQLDEEFKKVIDLVLYVFGSLG 413

Query: 420 FEKIMV----KLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           FE        +     +K +GSD  W+ AEN +      I  +    +NT V  GE AFY
Sbjct: 414 FENFTAQISLRDKENRDKYIGSDENWEKAENAI------INAARDKNLNTVVEYGEAAFY 467

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDA+GR WQ GTIQVD+NLP RF   Y  S  +   PVMIHRA FGS+ERFI
Sbjct: 468 GPKLDFMVKDALGRSWQLGTIQVDYNLPERFELTYKGSDDQLHRPVMIHRAPFGSMERFI 527

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            I++E+  GN PLWL P QAI+  ++     YA+++ NLL++H +    D RNE+I  KI
Sbjct: 528 AILLEHTAGNFPLWLMPEQAIILCLSDKYEIYAKKVLNLLENHEIRALIDNRNESIGRKI 587

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ--KVSLLDAIPILTKE 644
           R+  ++K P ++I G++E    +I IRR G        V++ +   I+  E
Sbjct: 588 RDAEMQKTPFMLIVGEEEEKNNTISIRRHGQEGKGNITVTIEEFARIVNDE 638


>gi|302682704|ref|XP_003031033.1| hypothetical protein SCHCODRAFT_77271 [Schizophyllum commune H4-8]
 gi|300104725|gb|EFI96130.1| hypothetical protein SCHCODRAFT_77271 [Schizophyllum commune H4-8]
          Length = 728

 Score =  612 bits (1577), Expect = e-173,   Method: Composition-based stats.
 Identities = 233/650 (35%), Positives = 362/650 (55%), Gaps = 25/650 (3%)

Query: 3   SDIKLTFPDGSIK-NFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIE 60
            +I +T PDG+ +       +   +A  IS+ LA K V   ++G++ DL  P+ +   +E
Sbjct: 81  EEITITLPDGAERKGTSWETSPMSIALEISKGLADKVVIAKVDGQLWDLERPLEKSCKLE 140

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDEL 119
           ++  + P    V  HS AH++ EA +  +    + +GP  ++GF+Y+   E +P    + 
Sbjct: 141 LLDFDHPEGKRVFWHSSAHVLGEAAERHY-GCHLCLGPPTDEGFFYEMAIEDRPVQPSDY 199

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE-SIPAKENVTLYRQGE 178
             +EK  ++ I     F +  +S E   ++       YK  +++  IP  E+ T+YR G 
Sbjct: 200 PALEKVSEKAIKEKQKFERLVVSKENLLKM--FNYNKYKQYLIQTKIPDGESTTVYRCGP 257

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLC GPH+  TG++K    + K + +Y+ GD     L RIYG ++  +++L ++  FL
Sbjct: 258 MIDLCVGPHIPHTGRIK-AMMVTKSSASYFLGDQANDTLQRIYGISFPDKKQLAEHKAFL 316

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
            E+ KRDHRK+ RE +LF   +   G  F+   G +I+ TLI  MR +  K  Y+E+ +P
Sbjct: 317 AEAAKRDHRKIGREQELFFFHDLSPGSCFFLPHGTRIYNTLIELMRSEYFKRGYQEVISP 376

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  LW+ SGHW++Y+ +MF +    D       +ALKPMNCPGH  +F+   +SYRE
Sbjct: 377 NMYNAKLWETSGHWENYKDDMFTLDIEKD------NWALKPMNCPGHCLIFDSRDRSYRE 430

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFG ++RNE SG+L GL RVR F QDD H+FC   Q+  E   + + +  +Y  
Sbjct: 431 LPIRMAEFGIIHRNEASGALSGLTRVRRFVQDDTHIFCMPSQVEAEMAGLFDFMQHVYGI 490

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFE  + +LSTRPEK +G    W+ AE+ +K  L+             +  G+GAFYGP
Sbjct: 491 FGFEFHL-ELSTRPEKYLGEVETWNAAEDQLKQALEKYYPG-----KWELNPGDGAFYGP 544

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  ++DA+ R +QC TIQ+DF LP RFN  Y +++ E   P++IHRA+ GSIERF+ I
Sbjct: 545 KIDITIRDALKRAYQCATIQLDFQLPQRFNLKYRSNNEEVQRPIIIHRAILGSIERFVAI 604

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
             E+F G  P WLSP Q +V  + +   EYA E+A  L   +L  E D  + T+  KIR 
Sbjct: 605 ATEHFAGKWPFWLSPRQVLVIPVAAPYKEYASEVAETLSKANLYAEVDNSDNTLQKKIRN 664

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ----KVSLLDAIPILTK 643
             I +   I++ G+ E   +S+ +R      T+     + L D +  L K
Sbjct: 665 GEIAQYNFILVVGETELESKSVNVRNRDDVGTKARSATIPLADIVDKLVK 714


>gi|328778641|ref|XP_395662.3| PREDICTED: threonyl-tRNA synthetase, cytoplasmic-like isoform 1
           [Apis mellifera]
          Length = 718

 Score =  611 bits (1576), Expect = e-173,   Method: Composition-based stats.
 Identities = 235/657 (35%), Positives = 371/657 (56%), Gaps = 24/657 (3%)

Query: 3   SDIKLTFPDGS-IKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIE 60
           +DIK+  PDG  I     H T  ++A++IS+ LA   +   +N ++ DL  P+     +E
Sbjct: 77  TDIKVILPDGKEIIAQSWHTTPYEIAKNISQGLADNTIIAKVNNELWDLDRPLEFNCKLE 136

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDEL 119
           ++  + P +  V  HS AHI+ E ++ ++    +  GP IE+GFYYD   + +  S+ + 
Sbjct: 137 LLKFDHPDAQQVFWHSSAHILGETMERVYGGC-LCYGPPIENGFYYDMYLDDKGISNLDF 195

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             +E   + I+    PF +  ++ E   E+F+     +K+ I+         T+YR G  
Sbjct: 196 PFLESLYKSIVKDKQPFERLEMTKEDLLEMFKY--NEFKIRIINEKIHTPTTTVYRCGPL 253

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPH+R TG+VK   K+ K +  YW G++N   L R+YG ++   ++L ++  F E
Sbjct: 254 IDLCRGPHIRHTGKVK-AIKITKNSSTYWEGNANAESLQRVYGISFPDTKQLKEWEKFQE 312

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+ KRDHRK+ +E +LF   E   G  F+  +G  I+ TL+ ++R + +   ++E+ TP 
Sbjct: 313 EAAKRDHRKIGKEQELFFFHELSPGSCFFQPRGAYIYNTLVEFIRSEYRKRGFQEVVTPN 372

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           + +  LWQ SGHW  Y  NMF+         +  TFALKPMNCPGH  +F+   +S+REL
Sbjct: 373 IYNNKLWQTSGHWLHYAENMFSFDV------EKETFALKPMNCPGHCMIFDVRNRSWREL 426

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+A+FG ++RNE SG+L GL RVR F QDDAH+FC+ +Q+ +E +     +  +Y  F
Sbjct: 427 PLRMADFGVLHRNEMSGALTGLTRVRRFQQDDAHIFCSVDQIKDEMIGALEFLKHVYSVF 486

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF   +  LSTRPEK +G   +W+ AE  +   LD      +      +   +GAFYGPK
Sbjct: 487 GFTFNLC-LSTRPEKYLGDLEMWNQAEKALAESLDAFGEQWK------INPEDGAFYGPK 539

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +  + DA+ R  QC TIQ+DF LP RFN  YVN   EK  PV+IHRA+ GS+ER I I+
Sbjct: 540 IDITIMDALKRAHQCATIQLDFQLPIRFNLSYVNEAGEKTRPVIIHRAILGSVERMIAIL 599

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIRE 597
            E++ G  P WLSP Q +V  ++S   +YA ++ + L +     E D   ++T+N KIR 
Sbjct: 600 TESYAGKWPFWLSPRQVMVIPVSSQFDDYAIQVKDKLWNDGFMAELDTDPSDTLNKKIRN 659

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT--KESLPPDCQK 652
             + +   I++ G+KE +  ++ +R   +    ++ + D +      KE    +C++
Sbjct: 660 AQLAQFNFILVVGEKELNAGTVNVRTRDNVVHGEILVDDLLKKFRIFKERKDKNCEE 716


>gi|73951029|ref|XP_857141.1| PREDICTED: similar to threonyl-tRNA synthetase-like 2 isoform 2
           [Canis familiaris]
          Length = 799

 Score =  611 bits (1575), Expect = e-172,   Method: Composition-based stats.
 Identities = 241/648 (37%), Positives = 357/648 (55%), Gaps = 23/648 (3%)

Query: 2   PSDIKLTFPDGSIKNFPVHAT-GSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
            + I +    G      V  T    VA  IS  LA+  V   +NG++ DL  P+  + ++
Sbjct: 156 SNVITVRMAGGKTVEGEVWTTTPYQVAAEISPELAESTVVAKVNGELWDLDRPLEGDSTL 215

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDE 118
           E++T ++  + AV  HS AHI+ EA++  +    +  GP IE+GFYYD   E +  SS E
Sbjct: 216 ELLTFDNEEAQAVYWHSSAHILGEAMELYYGGH-LCYGPPIENGFYYDMFIEDRAVSSTE 274

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L+ +E   + II    PF +  +S E   E+F+     +K  IL         T+YR G 
Sbjct: 275 LSALENICKTIIKEKQPFERLEISKEVLLEMFKY--NKFKCRILNEKVHTSTTTVYRCGP 332

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLC+GPHVR TG++K   K+ K +  YW G+     L RIYG ++   + +  +  F 
Sbjct: 333 LIDLCKGPHVRHTGKIK-AIKIFKNSSTYWEGNPEMETLQRIYGISFPDNKMMKTWEKFQ 391

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE++ RDHRK+ +E +LF   +   G  F+  +G  I+ TL+ ++R +    ++ E+ +P
Sbjct: 392 EEAKNRDHRKVGKEQELFFFHDLSPGSCFFLPRGAFIYNTLMDFIREEYHRRNFTEVLSP 451

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  LW+ SGHW  Y  NMF      DT      FALKPMNCPGH  +F H  +S+RE
Sbjct: 452 NMFNSKLWETSGHWQHYSENMFTFDIEKDT------FALKPMNCPGHCLMFAHRPRSWRE 505

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           +PVRLA+FG ++RNE SG+L GL RVR F QDDAH+FCT EQ+  E       + S+Y  
Sbjct: 506 MPVRLADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCTVEQIEEEIKGCLQFLQSVYST 565

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF   +  LSTRPE  +G   LWD+AE  ++  L       +      +  G+GAFYGP
Sbjct: 566 FGFSFQLN-LSTRPENFLGEVELWDEAEKQLQNSLVEFGKPWK------MNPGDGAFYGP 618

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH-PVMIHRAVFGSIERFIG 536
           K +  +KDAIGR  QC TIQ+DF LP RFN  YV+   +    PV+IHRA+ GS+ER I 
Sbjct: 619 KIDIKIKDAIGRYHQCATIQLDFQLPIRFNLTYVSKDGDDKRNPVIIHRAILGSVERMIA 678

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FRNETINYKI 595
           I+ EN+ G  P WLSP Q +V  +  +  +YA ++++         + D   + T+N KI
Sbjct: 679 ILSENYGGKWPFWLSPRQVMVIPVGPTCEKYALQVSSAFFEEGFMADVDLDHSCTLNKKI 738

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           R   + +   I++ G+KE +  ++ +R   +    ++S+  AI  L  
Sbjct: 739 RNAQLAQYNFILVVGEKEKTNNAVNVRTRDNKIHGEISVTSAIHKLKN 786


>gi|108804139|ref|YP_644076.1| Ser-tRNA(Thr) hydrolase/threonyl-tRNA synthetase [Rubrobacter
           xylanophilus DSM 9941]
 gi|123368184|sp|Q1AWG4|SYT_RUBXD RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|108765382|gb|ABG04264.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Rubrobacter
           xylanophilus DSM 9941]
          Length = 639

 Score =  611 bits (1575), Expect = e-172,   Method: Composition-based stats.
 Identities = 260/647 (40%), Positives = 380/647 (58%), Gaps = 23/647 (3%)

Query: 6   KLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITP 64
            +  PDG            DVA  I   LA+ AV   +NG++ DL  PV  G  +E +T 
Sbjct: 3   TVRLPDGKELEVGSGERLEDVARRIGPRLARDAVVARLNGRLVDLDLPVDGGGELEFVTA 62

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           + P  L V+RHS AH MA+A+  ++P  ++ IGP ++DGFYYD +     S ++L +IE+
Sbjct: 63  DSPEGLYVLRHSTAHAMAQAILELYPGSKLTIGPPVDDGFYYDIEVNGRISEEDLPRIEE 122

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
           KM+EI  RD P  ++ +S E+AR L+      YK+E+++ IP  E V++YRQG++FDLCR
Sbjct: 123 KMREIARRDLPVRREEVSKEEARRLYR--DNPYKLELIDEIP-DERVSIYRQGDFFDLCR 179

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV STG++  F KL  VAGAYWRGD N PML+RIYGTAW T+++L  YL  LEE+  R
Sbjct: 180 GPHVPSTGRLGAF-KLQSVAGAYWRGDENNPMLTRIYGTAWPTEKQLRAYLKRLEEARAR 238

Query: 245 DHRKLAREMDLFHIAEDG--SGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           DHR+L RE+ LF  A +    G+  +  KG  +   +  ++R  + +  Y+ + T  +++
Sbjct: 239 DHRRLGRELGLFTFAPEDVGPGIPLFLPKGETLRHLMEGFVREVQTRHGYQHVWTGHLVN 298

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + L+ +SGH + YR  MF      +       + LKPMNCP H+ +FN   +SYRELPVR
Sbjct: 299 ERLYARSGHLEHYRDAMFPPMRDGEVS-----YRLKPMNCPSHMTLFNSRPRSYRELPVR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
            AEF ++YR E SG L GL RVR  TQDDAHVFCT+EQ+  E  +   +I  +   +GF 
Sbjct: 354 YAEFATLYRYEKSGELSGLTRVRSLTQDDAHVFCTEEQVQEEFARALAIIREVLDAYGFT 413

Query: 422 KIMVKLSTRPEK---RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
              V+LS R  +    +  +  W  AE  ++  LD         I+     GE AFYGPK
Sbjct: 414 DYRVRLSLRDPEGGKYIADEEKWGRAEGALRAALDAAG------IDYEPAPGEAAFYGPK 467

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +++ +D +GR+WQ  TIQVDF  P R    YV    E+  PV++HRAV G+ ERF+ ++
Sbjct: 468 ADFMARDVLGREWQLSTIQVDFIQPGRLGCEYVGEDGERHTPVLLHRAVTGTTERFMAVL 527

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE++ G  P+WLSP+QA+V  +    +EYA+ +   L    L +E D    ++  KIRE+
Sbjct: 528 IEHYAGAFPVWLSPVQAVVIPVADRHLEYARRVREELSEGGLRVEVDDSPNSMQKKIREN 587

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQK-VSLLDAIPILTKE 644
           + +K P ++I GD+E    ++ +RR G    Q  + L   +  +  E
Sbjct: 588 ARQKTPYLLIVGDREEEAGTVNVRRRGEGKRQTEMGLRGFLERVRGE 634


>gi|325860506|ref|ZP_08173616.1| threonine--tRNA ligase [Prevotella denticola CRIS 18C-A]
 gi|325481987|gb|EGC85010.1| threonine--tRNA ligase [Prevotella denticola CRIS 18C-A]
          Length = 649

 Score =  611 bits (1575), Expect = e-172,   Method: Composition-based stats.
 Identities = 249/650 (38%), Positives = 392/650 (60%), Gaps = 19/650 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            +K+TFPDGS++ +    TG  +AESIS +LA+  V+  +NG   +L+ P+  + +I + 
Sbjct: 1   MVKITFPDGSVREYEQGVTGYQIAESISPALARDVVSCGVNGVTTELNRPINGDATIALY 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD--FDKEQPFSSDELA 120
             +D        H+ AH++AEA+Q ++P +Q   GP +E+GF+YD      Q  S ++  
Sbjct: 61  KFDDEEGKHTFWHTSAHLLAEALQELYPGIQFGFGPAVENGFFYDVMPAAGQTISENDFP 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IE+KM+E+  ++ P ++  +S   A + F +  + YKVE +E       ++ Y QG + 
Sbjct: 121 RIEEKMRELARKNEPVVRHDVSKADAIKEFTADGQEYKVEHIEQDLEDGTISTYTQGHFT 180

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ STG +K   K+  VAGA+WRGD+ R  ++RIYG  +  ++ L +YL  LEE
Sbjct: 181 DLCRGPHLVSTGAIK-AIKITSVAGAFWRGDAKREQMTRIYGITFPKKKMLDEYLVMLEE 239

Query: 241 SEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++KRDHRK+ +EM+LF  +   G G+  W  KG ++   L   +RR +   +Y+E+ TP 
Sbjct: 240 AKKRDHRKIGKEMELFMFSDRVGKGLPIWLPKGTQLRLRLQDLLRRLLRPYNYQEVITPG 299

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +  ++L+  SGH+  Y  + F       T ++   + LKPMNCP H  V+ +  +SY++L
Sbjct: 300 IGGKNLYVTSGHYAHYGKDSFQ---PIHTPEEDEEYMLKPMNCPHHCEVYAYKPRSYKDL 356

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG+V+R E SG LHGL RVR FTQDDAH+F   EQ+  E     ++I+ ++K F
Sbjct: 357 PLRIAEFGTVFRYEKSGELHGLTRVRTFTQDDAHIFVRPEQVKTEFETNIDIILKVFKTF 416

Query: 419 GFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           GF+    ++S R        +GSD +W+++E  +K   +      +  +   V LGE AF
Sbjct: 417 GFDNYEAQISLRDPNDKEKYIGSDEVWEESEAAIKQACE------EKGLKARVELGEAAF 470

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK ++++KDAIGR WQ GTIQVD+NLP+RF   Y    + K  PVMIHRA FGS+ERF
Sbjct: 471 YGPKLDFMVKDAIGRRWQLGTIQVDYNLPNRFKLEYTAEDNSKKTPVMIHRAPFGSLERF 530

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             ++IE+  G+ PLWL+P Q  +  I+    +YA ++   L +H +    D RNE I  K
Sbjct: 531 TAVLIEHTAGHFPLWLTPDQVAILPISEKYNDYAFKVKAYLDAHDVRSIMDDRNEKIGRK 590

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IR++ +K++P ++I G+KEA+E  + +R+ G      +++      +  E
Sbjct: 591 IRDNELKRVPYMVIVGEKEAAEGLVSMRQQGGGEQATMTMEAFAERINAE 640


>gi|327314606|ref|YP_004330043.1| threonine--tRNA ligase [Prevotella denticola F0289]
 gi|326946255|gb|AEA22140.1| threonine--tRNA ligase [Prevotella denticola F0289]
          Length = 649

 Score =  611 bits (1575), Expect = e-172,   Method: Composition-based stats.
 Identities = 250/650 (38%), Positives = 392/650 (60%), Gaps = 19/650 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            +K+TFPDGS++ +    TG  +AESIS +LA+  V+  +NG   +L+ P+  + +I + 
Sbjct: 1   MVKITFPDGSVREYEQGVTGYQIAESISPALARDVVSCGVNGVTTELNRPINGDATIALY 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD--FDKEQPFSSDELA 120
             +D        H+ AH++AEA+Q ++P +Q   GP +E+GF+YD      Q  S ++  
Sbjct: 61  KFDDEEGKHTFWHTSAHLLAEALQELYPGIQFGFGPAVENGFFYDVMPAAGQTISENDFP 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IE+KM+E+  ++ P ++  +S   A + F +  + YKVE +E       ++ Y QG + 
Sbjct: 121 RIEEKMRELARKNEPVIRHDVSKADAIKEFTADGQEYKVEHIEQDLEDGTISTYTQGHFT 180

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ STG +K   K+  VAGA+WRGD+ R  ++RIYG  +  ++ L +YL  LEE
Sbjct: 181 DLCRGPHLVSTGAIK-AIKITSVAGAFWRGDAKREQMTRIYGITFPKKKMLDEYLVMLEE 239

Query: 241 SEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++KRDHRK+ +EM+LF  +   G G+  W  KG ++   L   +RR +   +Y+E+ TP 
Sbjct: 240 AKKRDHRKIGKEMELFMFSDRVGKGLPIWLPKGTQLRLRLQDLLRRLLRPYNYQEVITPG 299

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +  ++L+  SGH+  Y  + F       T ++   + LKPMNCP H  V+ +  +SY++L
Sbjct: 300 IGGKNLYVTSGHYAHYGKDSFQ---PIHTPEEDEEYMLKPMNCPHHCEVYAYKPRSYKDL 356

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG+V+R E SG LHGL RVR FTQDDAH+F   EQ+  E     ++I+ ++K F
Sbjct: 357 PLRIAEFGTVFRYEKSGELHGLTRVRTFTQDDAHIFVRPEQVKTEFETNIDIILKVFKTF 416

Query: 419 GFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           GF+    ++S R        +GSD +W+++E  +K   +      +  +   V LGE AF
Sbjct: 417 GFDNYEAQISLRDPNDKEKYIGSDEVWEESEAAIKQACE------EKGLKARVELGEAAF 470

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK ++++KDAIGR WQ GTIQVD+NLP+RF   Y    + K  PVMIHRA FGS+ERF
Sbjct: 471 YGPKLDFMVKDAIGRRWQLGTIQVDYNLPNRFKLEYTAEDNSKKTPVMIHRAPFGSLERF 530

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             ++IE+  G+ PLWL+P Q  +  I+    +YA ++   L +H L    D RNE I  K
Sbjct: 531 TAVLIEHTAGHFPLWLTPDQVAILPISEKYNDYAFKVKAYLDAHDLRSIMDDRNEKIGRK 590

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IR++ +K++P ++I G+KEA+E  + +R+ G      +++      +  E
Sbjct: 591 IRDNELKRVPYMVIVGEKEAAEGLVSMRQQGGGEQATMTMEAFAERINAE 640


>gi|320333471|ref|YP_004170182.1| threonyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
 gi|319754760|gb|ADV66517.1| threonyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
          Length = 649

 Score =  611 bits (1574), Expect = e-172,   Method: Composition-based stats.
 Identities = 254/656 (38%), Positives = 387/656 (58%), Gaps = 30/656 (4%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           + +  PDG   +    AT  D A +I   LA+ A+A   NG + DL  P+ +G+ I +IT
Sbjct: 1   MHVFLPDGKQLDLQQGATALDAARAIGPRLAQDALAATANGDLVDLMTPLPDGARITLIT 60

Query: 64  PEDP-RSLAVIRHSCAHIMAEAVQSIW-------PEVQVAIGPIIEDGFYYDFDKEQPFS 115
            ++P  + AV RHS  H+M++AV   +         V+  +GP IE+G+Y DFD  +P  
Sbjct: 61  KKNPGEAAAVFRHSLGHVMSQAVGEFYRAKGHPADAVKRGVGPSIENGWYQDFDLPEPLR 120

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            ++L +IE+ M+EI++R+  F ++ +S  +A    +   + YK E++  +P  E +T Y 
Sbjct: 121 EEDLPEIERIMREILSRNLDFSRREVSKAEALA--QFGGDPYKAELIRELPDDEPITFYT 178

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
           QG++ DLCRGPH   TG +   FKLM  +GAYWRG+   P+L RIYG A+ TQ+EL +YL
Sbjct: 179 QGDYTDLCRGPHFPRTGALPGAFKLMSTSGAYWRGNEKNPILQRIYGVAFATQKELDEYL 238

Query: 236 YFLEESEKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEE 293
           + LEE++KRDHRKL RE++LF I    G G+  W   G  + + L  ++R +     Y+ 
Sbjct: 239 HRLEEAKKRDHRKLGRELELFVIDPLVGKGLPMWLPNGTILREELTRFLREQQFARGYQG 298

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           + TP + +  L++ SGH+ +Y  + F+    DD       + LKPMNCP HV ++    +
Sbjct: 299 VVTPNIGNLELYKTSGHYQNYSDSNFSPITVDD-----EQYMLKPMNCPHHVRIYASKPR 353

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYR+LPVRLAEFG+VYR E SG L+GL RVRGFTQDDAH+FC  +Q+  E L + +L + 
Sbjct: 354 SYRDLPVRLAEFGTVYRYEQSGELNGLTRVRGFTQDDAHLFCRPDQLKAEFLNVLDLTVL 413

Query: 414 IYKDFGFEKIMVKLSTRPEK---RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
           + + FG   +  ++ TR  +    VG++  W+ AE  +   ++ +       +   +  G
Sbjct: 414 VLRTFGMNDVRFRVGTRDPENTKYVGAEDNWNAAERQIIEAVEEVG------LPYSIEPG 467

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           + AFYGPK +++++D +GR+WQ GTIQVD+NLP RF+  YV        P+MIHRA FGS
Sbjct: 468 DAAFYGPKLDFVVRDVLGREWQLGTIQVDYNLPERFDISYVGEDGADHRPIMIHRAPFGS 527

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
           +ERF+GI+IE++ G+ PLWL+P Q  +  I     EYA  +   L++  L  E D  +  
Sbjct: 528 LERFVGILIEHYGGDFPLWLAPRQVAIIPIADRHNEYAYALEAELRAAGLRTEVDDSSNR 587

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRF---GSTTTQKVSLLDAIPILTK 643
           +N K+R   + KIP+++I GDKE   R + +R     G    + V+  D    L +
Sbjct: 588 MNAKVRAAELSKIPVMLIVGDKEQEGRQVSVRERTPEGHKERKGVAFDDLKAELLE 643


>gi|188996057|ref|YP_001930308.1| threonyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
 gi|229558457|sp|B2V6M2|SYT_SULSY RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|188931124|gb|ACD65754.1| threonyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 643

 Score =  610 bits (1573), Expect = e-172,   Method: Composition-based stats.
 Identities = 269/648 (41%), Positives = 415/648 (64%), Gaps = 21/648 (3%)

Query: 4   DIKLTFPDGSIK-NFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEI 61
            I++   D + K  F    T  D+ +++     K  V   +NG++ D+  P+ + G+++ 
Sbjct: 1   MIEIFIEDLNQKFTFNEGITLKDILKNL-NGKFKDVVGGKLNGEIIDIHTPINQSGNLKF 59

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPE--VQVAIGPIIEDGFYYDFDKE-QPFSSDE 118
           +  ED  SL ++RHS AHIMA+A++ I+ +  V + IGP  E GFYYD + E +  + ++
Sbjct: 60  LKKEDKESLEILRHSLAHIMAQALKEIYGDENVHLGIGPTTEHGFYYDVEIEGKSLTDED 119

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE-SIPAKENVTLYRQG 177
           L QIE+KM+EII +     +  L  E+A + FE+KKE YK++I++ +IP  E ++LY+QG
Sbjct: 120 LPQIEEKMKEIIKKGYQIERFELPREEAIKFFENKKEIYKIDIIKHNIPEGEPISLYKQG 179

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           ++ DLCRGPH+ ST +   F KL+ V+GAYWRG    PML RIYG A+ +++EL  YL  
Sbjct: 180 DFVDLCRGPHLPSTDKAGAF-KLISVSGAYWRGKETNPMLQRIYGVAFWSEKELKDYLNM 238

Query: 238 LEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLIS-YMRRKIKDDYEEIN 295
           LEE++KRDHRK+ ++++LF I E+ G G+  W  KG  I + +   + +  +K  Y+ + 
Sbjct: 239 LEEAKKRDHRKIGKDLELFLIDEEIGGGLAIWLPKGAIIRKEIEDAWKKEHLKRGYQLVY 298

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP V  + LWQ SGH   Y+ NM+          +   + +KPMNCP HV ++    +SY
Sbjct: 299 TPHVGKEQLWQTSGHLSFYQENMYPRMQI-----EEEGYYVKPMNCPFHVEIYKSKQRSY 353

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           +E P+RLAE G+VYR E SG+LHGLMRVRGFTQDDAH+ C ++Q+ +E  ++ NL ++  
Sbjct: 354 KEFPIRLAELGTVYRYERSGALHGLMRVRGFTQDDAHIICREDQVEDEIREVLNLALNTL 413

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           K +GF++  V LST+PEK VG D +W+ AEN ++  +++        ++  +  G GAFY
Sbjct: 414 KSYGFDEFEVYLSTKPEKYVGDDKMWEVAENSLRKAIESTG------LDYKIDDGGGAFY 467

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +KDAIGR WQC TIQ DFNLP RF+ +Y+   ++K  P MIHRA+FGSIERFI
Sbjct: 468 GPKIDVKIKDAIGRLWQCSTIQFDFNLPERFDMYYIGEDNQKHRPYMIHRAIFGSIERFI 527

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
           G+++E++ G LP+WLSP+Q  +  I    +EYA+ +   L  + + +E D RNE +N KI
Sbjct: 528 GVLLEHYAGFLPVWLSPVQVKIIPIADKHLEYAETVKQKLLENDIRVELDDRNERMNKKI 587

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           R+  ++KIP +++ GDKEA   ++ +R  G   +Q +S+ + +  + +
Sbjct: 588 RDAELQKIPFMLVVGDKEAETGTVAVREKGKQGSQTLSIDEFVSKIKE 635


>gi|303277979|ref|XP_003058283.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226460940|gb|EEH58234.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 725

 Score =  610 bits (1573), Expect = e-172,   Method: Composition-based stats.
 Identities = 227/647 (35%), Positives = 369/647 (57%), Gaps = 21/647 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHAT-GSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIE 60
             IK+T PDG++++   + T   D+A SI + LA+ ++   ++GK  D+  P+  + +++
Sbjct: 56  ETIKVTMPDGAVRDAVKNVTSPWDIAMSIHKKLAQASILAHVDGKDWDMRRPLEGDCALK 115

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDEL 119
           + + +DP    +  HS AH++ EA++  +    + IGP IE+GFYYD    ++  S  E 
Sbjct: 116 LFSFDDPEGKELYWHSSAHVLGEALELEY-GADLTIGPSIEEGFYYDCYLGDKTLSDHER 174

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            QI+K+M+ II    PF +  +S ++A E+F      +KVE++ ++P    ++ YR G  
Sbjct: 175 TQIQKRMEGIIKEKQPFQRIEVSRDEALEMFLE--NKFKVELITNLPEDATISCYRCGPM 232

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPH+  T  +K        + ++WR D  +  L R+Y   + T + + +Y   +E
Sbjct: 233 VDLCRGPHLPDTAWIKAVTVNQ-CSRSHWRADVTKDPLVRVYAVTFPTDKLMKEYKLRIE 291

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E++KRDHR L    +LF       G  F+   G  I+  LI++++ K  + +Y E+ TP 
Sbjct: 292 EAKKRDHRVLGLHQELFFFDILSPGSCFFLPDGATIYNNLINFIKEKYWEYEYSEVVTPN 351

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           + +  LW+ SGH   Y+ NMF+         +   F LKPMNCPGH  +F H  +S+REL
Sbjct: 352 IYNFDLWKTSGHAAHYKENMFSFNV------EKEEFGLKPMNCPGHCVMFGHRKRSFREL 405

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLA+FG ++RNE SG+LHGL RVR F QDDAH+FC  +QM +E +     +  +Y+ F
Sbjct: 406 PMRLADFGVLHRNEFSGALHGLTRVRRFQQDDAHIFCRPDQMEHELVNFMKFLDEVYEVF 465

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           G    M KLSTRPE  +G   +W+ AE+ ++  L+      +      +  G+GAFYGPK
Sbjct: 466 GLTYEM-KLSTRPEGYLGELEVWNQAEDALRNALNKSGKEWK------LNPGDGAFYGPK 518

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +  + DA+ R +QC T+Q+DF LP RFN  YV  ++E   P++IHRA+ GS+ER   I+
Sbjct: 519 IDITVFDALKRRFQCATVQLDFQLPIRFNLSYVTENNEPARPIIIHRAILGSVERMFAIL 578

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
            E+F G  P WLSP Q ++  I+ ++ EYA E+   L+      + D  +  +  K+RE 
Sbjct: 579 TEHFAGKYPYWLSPKQVMLVPISEASREYALEVKKQLRKAGHHAQVDETDRKMQKKVREA 638

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
            ++    I++ G+ E + R++ +R   +    +V L + + +L +E 
Sbjct: 639 QLEHWNYILVVGEGEKTNRTVNVRTRDNVVHGEVKLEELMTVLNEER 685


>gi|115375454|ref|ZP_01462714.1| threonyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|115367497|gb|EAU66472.1| threonyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
          Length = 616

 Score =  610 bits (1573), Expect = e-172,   Method: Composition-based stats.
 Identities = 273/625 (43%), Positives = 395/625 (63%), Gaps = 15/625 (2%)

Query: 28  ESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQ 86
           E I   LAK A+   +NG+  DL+ P+  +  ++I T +   +L +IRH  AH++A AVQ
Sbjct: 3   EGIGAGLAKAALFARVNGQDMDLARPLTEDAKLQIFTTKSTEALELIRHDAAHLVASAVQ 62

Query: 87  SIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKA 146
            ++P  QV IGP  E+GFYYDF +E+PF+ ++L +IE +    IAR+ PF+++ +S E+A
Sbjct: 63  RLFPGTQVTIGPATEEGFYYDFFREKPFTPEDLEKIEAEANAEIARNLPFVRKEVSMEEA 122

Query: 147 RELFESKKEAYKVEILESIPAKE--NVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVA 204
             LFE K E +KVEI++ I AK    +TLY  G+W D C GPH  STG+V    K++  +
Sbjct: 123 VRLFEEKGEKFKVEIIQDIAAKGAKTLTLYSHGDWVDFCLGPHGPSTGRVG-VIKILSSS 181

Query: 205 GAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSG 264
           GAYWRGD   PML RIYGTA+  ++ L +YL  +EES+KRDHRKL +E+DLFH      G
Sbjct: 182 GAYWRGDHRNPMLQRIYGTAFLDKKALQEYLTRIEESKKRDHRKLGKELDLFHFHPFAPG 241

Query: 265 VIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKC 323
             FW  KG  ++QTL  +MRR   +  Y EI TP + ++ LW+ SGHW  Y+ NMF V  
Sbjct: 242 SAFWSPKGTTLYQTLSQWMRRLTAETGYVEIKTPLMFNKGLWEASGHWGKYKENMFLVLD 301

Query: 324 ADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRV 383
            +    D   F+LKPMNCP H   F     SYR+LP+RL     ++RNE +GSL GL RV
Sbjct: 302 NESGEHD---FSLKPMNCPSHHLYFGFKRHSYRDLPLRLHTQDVLHRNEAAGSLGGLTRV 358

Query: 384 RGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDD 443
           R F QDDAH++CT++Q+ +E  +   L+  +Y   G +    K STRPE+R+G DALWD 
Sbjct: 359 RQFAQDDAHIYCTEDQIGDEVRRFVKLLDHVYNAVGLKYSA-KFSTRPEQRLGEDALWDR 417

Query: 444 AENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLP 503
           AE+ ++GVL T+       +   V  GEGAFYGPK ++ + D+IGR WQ GTIQ+D+   
Sbjct: 418 AESALEGVLKTLG------VPYEVKPGEGAFYGPKIDFDVSDSIGRKWQLGTIQLDYLAA 471

Query: 504 SRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSS 563
            RF+  Y+   + +  PV++HRA++GS ERFI I+IE+F G  P WL+PIQA++ T+   
Sbjct: 472 QRFDLKYIGEDNAEHRPVVLHRAIYGSFERFIAILIEHFAGAFPAWLAPIQAVLVTVADR 531

Query: 564 AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRR 623
            ++YA+++ + L++    +E D R +++N KIRE  I+K+P  ++ GD E     +  RR
Sbjct: 532 QLDYARKVRDQLRAKGFRVELDDRGQSLNAKIREWQIQKLPFTLVIGDNEVEAGGVAPRR 591

Query: 624 FGSTTTQKVSLLDAIPILTKESLPP 648
           +G    + + L D   +L+KE+  P
Sbjct: 592 YGGEDLKSMKLEDFEALLSKEAALP 616


>gi|222528807|ref|YP_002572689.1| threonyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
 gi|222455654|gb|ACM59916.1| threonyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
          Length = 647

 Score =  610 bits (1572), Expect = e-172,   Method: Composition-based stats.
 Identities = 246/650 (37%), Positives = 381/650 (58%), Gaps = 21/650 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
             I +T PDG +       +G +  ++IS  L K+AVA  I+G + DL   +  + S E+
Sbjct: 2   DKIAVTLPDGKVLEAEKGISGMEFIKTISMRLYKEAVACKIDGVLKDLWTSLERDCSFEV 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           +T        V  H+ +HI+A+AV+ ++ + V++ IGP I++GFYYDFD E+  + + L 
Sbjct: 62  VTFSSDEGKKVYWHTTSHILAQAVKRLFGDKVKLGIGPAIDNGFYYDFDIEESITREILE 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IE++MQ+II  D    +  LS E+A +L + + E YKVE++  IP  E ++ YRQGE+ 
Sbjct: 122 KIEEEMQKIIKEDLKIERFELSREEAIKLMQQRGENYKVELINDIPEGEIISFYRQGEFV 181

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLC GPH+ STG+VK F KL+ VAGAYWRG+S   ML RIYG ++  + EL +YL  LEE
Sbjct: 182 DLCTGPHLPSTGRVKAF-KLLSVAGAYWRGNSKNKMLQRIYGISFEKKSELDEYLKKLEE 240

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQ 298
           ++KRDH ++ RE+++F  +E    G+     KG KI Q L  ++   + K  Y    TP 
Sbjct: 241 AKKRDHNRIGRELEIFTTSEVVGQGLPLLMPKGAKILQILQRFVEDEEEKRGYLLTKTPY 300

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L++ SGHWD YR  MF ++  ++        AL+PM CP    ++N   +SYR+L
Sbjct: 301 MAKSDLYKISGHWDHYRDGMFVIEEDEN-----EVLALRPMTCPFQFLIYNSKQRSYRDL 355

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R +E  +++RNE SG +HGL+RVR FT  DAH+ C  +Q+  E   + +LI  I K  
Sbjct: 356 PIRYSETSTLFRNESSGEMHGLIRVRQFTLSDAHIICRPDQVEEEFKGVLDLIQYIMKIL 415

Query: 419 GFEKIMVKLSTR-----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           G E  +    +R      EK + +   W+  EN MK +LD +       IN     GE A
Sbjct: 416 GIENDIWYRFSRWDPNNKEKYIDNPEAWEKTENDMKNILDKLG------INYKEAKGEAA 469

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +   K+  G++    TIQ+DF L  RF+  YV+   +K  P++IHR+  G  ER
Sbjct: 470 FYGPKLDIQFKNVYGKEDTIITIQIDFALAERFDMTYVDRDGQKKRPIIIHRSSIGCYER 529

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
            + ++IE + G  PLWL+P+Q  V  ++ +  EYA+ +A +LK +   +E D+R+ET+ Y
Sbjct: 530 TLAMLIEKYNGAFPLWLAPVQIRVIPVSDNFNEYAKNVARILKENGFRVEEDYRSETVGY 589

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           KIR+  ++KIP ++I G+KE  E ++ +R          ++ D I ++ +
Sbjct: 590 KIRDAQLQKIPYMVIVGEKEQKENTVAVRDRKKGDLGSFTIEDFIAMVKE 639


>gi|303248736|ref|ZP_07334989.1| threonyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
 gi|302489901|gb|EFL49829.1| threonyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
          Length = 647

 Score =  610 bits (1572), Expect = e-172,   Method: Composition-based stats.
 Identities = 272/646 (42%), Positives = 400/646 (61%), Gaps = 18/646 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG--SIEIITP 64
           +T  D S++       G  ++  IS    K AVA  ++GK  DL+ P+ EG   +  +  
Sbjct: 3   VTIEDSSLEAAAGEPCGQVLSRGISGKRMKNAVACLVDGKPLDLTAPLPEGGRDLAPVAA 62

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           + P  LA+IRHS AHIMAEAV+ ++P  QV IGP IE+GFYYDF  E+PF+ ++L  IE 
Sbjct: 63  DSPEGLAIIRHSTAHIMAEAVKKLFPAAQVTIGPSIENGFYYDFAFERPFTPEDLEAIEA 122

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
           +MQ+ IA ++PF   ++    A+ LF S+ E YK+EI++     + V+LYR G + DLCR
Sbjct: 123 EMQKSIAANAPFSCTFVPKADAKALFASQGEVYKLEIMDENIVGDTVSLYRHGTFTDLCR 182

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +TG VK F KL+ VAGAYWRGD  RPML RIYGTA+ +  +L +YL  LEE++KR
Sbjct: 183 GPHVPTTGAVKAF-KLLSVAGAYWRGDEKRPMLQRIYGTAFASDADLKKYLRHLEEAKKR 241

Query: 245 DHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQ 302
           DHRKL  ++DLF  +E+   G+  WH KG  I   L  + RR+ ++  Y+ +  P +L +
Sbjct: 242 DHRKLGTQLDLFSFSEEVGAGMPIWHPKGELIRTILEDFERREHLRRGYQLVRGPLILRR 301

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGH+D+YR NM+       T  D + + +KPMNC  H+ ++   ++SYR+LP R 
Sbjct: 302 ELWERSGHYDNYRENMYF------TEIDGQAYGIKPMNCLSHMLIYKSRVRSYRDLPQRY 355

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            E G V+R+E SG LHGLMRVR FTQDDAH+ C  +Q+ +E   +   +  +   FGF+ 
Sbjct: 356 FELGVVHRHEKSGVLHGLMRVRQFTQDDAHILCRPDQLLDEITGVIKFVQDVVALFGFDY 415

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
            +  LSTRPEK +GSD  WD A   +   ++++       +   +  G+GAFYGPK +  
Sbjct: 416 EVD-LSTRPEKSIGSDEDWDRATKALIDAMESLG------LPYDINEGDGAFYGPKIDIK 468

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LKDA+ R WQC T+Q DF LP RF+  Y ++  E+  PVM+HR + G++ERF+G++IE+ 
Sbjct: 469 LKDALERRWQCATVQCDFTLPERFDLVYTDADGERKRPVMLHRVILGAVERFLGVLIEHT 528

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G LP WLSP QA +  +T +  E+A+E    L    + +E D RNE + +K+RE  ++K
Sbjct: 529 AGALPTWLSPEQARILIVTDAQKEFAEEAKAKLAEAGIRVELDERNEKLGFKVREAQMEK 588

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
           +P +++ GDKE     + +R          SL + + ++T + L P
Sbjct: 589 VPYMLVAGDKEKELGGLNVRLRSGENLGVKSLDEIVLMITADCLEP 634


>gi|73951033|ref|XP_857231.1| PREDICTED: similar to threonyl-tRNA synthetase-like 2 isoform 4
           [Canis familiaris]
          Length = 798

 Score =  610 bits (1572), Expect = e-172,   Method: Composition-based stats.
 Identities = 240/647 (37%), Positives = 357/647 (55%), Gaps = 22/647 (3%)

Query: 2   PSDIKLTFPDGSIKNFPVHAT-GSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
            + I +    G      V  T    VA  IS  LA+  V   +NG++ DL  P+  + ++
Sbjct: 156 SNVITVRMAGGKTVEGEVWTTTPYQVAAEISPELAESTVVAKVNGELWDLDRPLEGDSTL 215

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDE 118
           E++T ++  + AV  HS AHI+ EA++  +    +  GP IE+GFYYD   E +  SS E
Sbjct: 216 ELLTFDNEEAQAVYWHSSAHILGEAMELYYGGH-LCYGPPIENGFYYDMFIEDRAVSSTE 274

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L+ +E   + II    PF +  +S E   E+F+     +K  IL         T+YR G 
Sbjct: 275 LSALENICKTIIKEKQPFERLEISKEVLLEMFKY--NKFKCRILNEKVHTSTTTVYRCGP 332

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLC+GPHVR TG++K   K+ K +  YW G+     L RIYG ++   + +  +  F 
Sbjct: 333 LIDLCKGPHVRHTGKIK-AIKIFKNSSTYWEGNPEMETLQRIYGISFPDNKMMKTWEKFQ 391

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE++ RDHRK+ +E +LF   +   G  F+  +G  I+ TL+ ++R +    ++ E+ +P
Sbjct: 392 EEAKNRDHRKVGKEQELFFFHDLSPGSCFFLPRGAFIYNTLMDFIREEYHRRNFTEVLSP 451

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  LW+ SGHW  Y  NMF      DT      FALKPMNCPGH  +F H  +S+RE
Sbjct: 452 NMFNSKLWETSGHWQHYSENMFTFDIEKDT------FALKPMNCPGHCLMFAHRPRSWRE 505

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           +PVRLA+FG ++RNE SG+L GL RVR F QDDAH+FCT EQ+  E       + S+Y  
Sbjct: 506 MPVRLADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCTVEQIEEEIKGCLQFLQSVYST 565

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF   +  LSTRPE  +G   LWD+AE  ++  L       +      +  G+GAFYGP
Sbjct: 566 FGFSFQLN-LSTRPENFLGEVELWDEAEKQLQNSLVEFGKPWK------MNPGDGAFYGP 618

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  +KDAIGR  QC TIQ+DF LP RFN  Y +   +  +PV+IHRA+ GS+ER I I
Sbjct: 619 KIDIKIKDAIGRYHQCATIQLDFQLPIRFNLTYRSRSGKIRNPVIIHRAILGSVERMIAI 678

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FRNETINYKIR 596
           + EN+ G  P WLSP Q +V  +  +  +YA ++++         + D   + T+N KIR
Sbjct: 679 LSENYGGKWPFWLSPRQVMVIPVGPTCEKYALQVSSAFFEEGFMADVDLDHSCTLNKKIR 738

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              + +   I++ G+KE +  ++ +R   +    ++S+  AI  L  
Sbjct: 739 NAQLAQYNFILVVGEKEKTNNAVNVRTRDNKIHGEISVTSAIHKLKN 785


>gi|260591627|ref|ZP_05857085.1| threonine--tRNA ligase [Prevotella veroralis F0319]
 gi|260536427|gb|EEX19044.1| threonine--tRNA ligase [Prevotella veroralis F0319]
          Length = 649

 Score =  609 bits (1571), Expect = e-172,   Method: Composition-based stats.
 Identities = 245/650 (37%), Positives = 394/650 (60%), Gaps = 19/650 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            +K+TFPDGS++ +    TG  +AESIS +LA+  V+  +NG+  +L+ P+  + +I + 
Sbjct: 1   MVKITFPDGSVREYEQGVTGYQIAESISPALARDVVSCGVNGETVELNRPINEDATIALY 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD--KEQPFSSDELA 120
             +D        H+ AH++AEA+Q ++P +Q   GP +E+GF+YD    K Q  S ++  
Sbjct: 61  KFDDEEGKHTFWHTSAHLLAEALQELYPGIQFGFGPAVENGFFYDVMPPKGQAISENDFP 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IE+KM+E+  ++   ++  +S   A + F +  + YKVE +E       ++ Y QG + 
Sbjct: 121 KIEEKMRELAKKNEQVVRHDISKANAVKEFTADGQEYKVEHIEQDLEDGTISTYTQGSFT 180

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ STG +K   K+  VAGA+WRGD+ R  ++RIYG ++  ++ L +YL  LEE
Sbjct: 181 DLCRGPHLVSTGAIK-AIKITSVAGAFWRGDAKREQMTRIYGISFPKKKMLDEYLVMLEE 239

Query: 241 SEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++KRDHRK+ +EM+LF  +   G G+  W  KG ++   L   +RR +   +Y+E+ TP 
Sbjct: 240 AKKRDHRKIGKEMELFMFSDRVGKGLPIWLPKGTQLRLRLQELLRRLLRPYNYQEVITPG 299

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +  ++L+  SGH+  Y  + F       T ++   + LKPMNCP H  V+ +  +SY++L
Sbjct: 300 IGGKNLYVTSGHYAHYGKDAFQ---PIHTPEEDEEYMLKPMNCPHHCEVYAYKPRSYKDL 356

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG+V+R E SG LHGL RVR FTQDDAH+F   +Q+  E     ++I+ ++  F
Sbjct: 357 PLRIAEFGTVFRYEKSGELHGLTRVRTFTQDDAHIFVRPDQVKAEFETNIDIILKVFATF 416

Query: 419 GFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           GF+    ++S R        +GSD +W+++E  +K   +      +  +   V LGE AF
Sbjct: 417 GFDNYEAQISLRDPNDKEKYIGSDEVWEESEAAIKAACE------EKGLKARVELGEAAF 470

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK ++++KDAIGR WQ GTIQVD+NLP+RF   Y    + K  PVMIHRA FGS+ERF
Sbjct: 471 YGPKLDFMVKDAIGRRWQLGTIQVDYNLPNRFKLEYTAEDNTKKTPVMIHRAPFGSLERF 530

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             ++IE+  G+ PLWL+P Q  +  I+    +YA+++     +H +    D RNE I  K
Sbjct: 531 TAVLIEHTAGHFPLWLTPDQVAILPISEKYNDYARKVKAYFDAHDVRSIMDDRNEKIGRK 590

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IR++ +K++P ++I G+KEA++  + +R+ G      +++ +    +  E
Sbjct: 591 IRDNELKRVPYMVIVGEKEAAQGLVSMRQQGGGEQATMTMEEFTKRINDE 640


>gi|288924947|ref|ZP_06418883.1| threonine--tRNA ligase [Prevotella buccae D17]
 gi|288338137|gb|EFC76487.1| threonine--tRNA ligase [Prevotella buccae D17]
          Length = 673

 Score =  609 bits (1571), Expect = e-172,   Method: Composition-based stats.
 Identities = 245/636 (38%), Positives = 384/636 (60%), Gaps = 19/636 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            +K+TFPDGS++ +    TG  +AESIS +LA+  V+  +NG+  +L+ P+  + +I + 
Sbjct: 1   MVKITFPDGSVREYEQGVTGLQIAESISPALARNVVSCGVNGETVELNRPINGDATIALY 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD--FDKEQPFSSDELA 120
             ED        H+ AH++AEA++ ++P +Q   GP IE+GF+YD      Q  S ++  
Sbjct: 61  KFEDEEGKHTFWHTSAHLLAEALKELYPGIQFGFGPAIENGFFYDVMPASGQTISENDFP 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IE KM E+  +D P +++ +   +A E F++  + YK E ++      +++ Y QG + 
Sbjct: 121 KIEAKMLELAKKDEPVVRREVPKAEALEEFKADGQTYKCEHIDLDLEDGSISTYTQGNFT 180

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ STG +K   K+  VAGA+WRGD+ R  ++RIYG ++  ++ L +YL  LEE
Sbjct: 181 DLCRGPHLMSTGAIK-ALKITSVAGAFWRGDAKREQMTRIYGISFPKKKMLDEYLVMLEE 239

Query: 241 SEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++KRDHRK+ +EM+LF  +   G G+  W  KG ++   L   +R  +   +Y+E+ TP 
Sbjct: 240 AKKRDHRKIGKEMELFMFSERVGKGLPIWLPKGTELRLRLQELLRSMLRPYNYQEVITPG 299

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +  + L+  SGH+  Y  + F       T ++   + LKPMNCP H  VF    +SY++L
Sbjct: 300 IGGKSLYVTSGHYAHYGKDAFQ---PIHTPEEDEEYMLKPMNCPHHCEVFARKPRSYKDL 356

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG+V+R E SG LHGL RVR FTQDDAH+F   +Q+  E     ++I+ ++  F
Sbjct: 357 PLRIAEFGTVFRYEKSGELHGLTRVRTFTQDDAHIFVRPDQVKAEFETNIDIILKVFNIF 416

Query: 419 GFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           GF+    ++S R        +GSD +W+++E  +K         ++  +   V LGE AF
Sbjct: 417 GFDNYEAQISLRDPNDKEKYIGSDEVWEESETAIKEA------CAEKGLKARVELGEAAF 470

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK ++++KDAIGR WQ GTIQVD+NLP+RF   Y    + K  PVMIHRA FGS+ERF
Sbjct: 471 YGPKLDFMVKDAIGRRWQLGTIQVDYNLPNRFKLEYTAEDNSKKTPVMIHRAPFGSLERF 530

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             ++IE+  G+ PLWL+P Q  +  I+    +YA+ +A    S  +    D RNE I  K
Sbjct: 531 TAVLIEHTAGHFPLWLTPDQVAILPISEKYNDYAKSVARYFDSVGVRAIIDERNEKIGRK 590

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
           IR++ +K++P ++I G+KE++E  + +R+ G     
Sbjct: 591 IRDNELKRVPYMVIVGEKESAEGLVSMRKQGGGRAG 626


>gi|1464742|gb|AAB04939.1| threonyl-tRNA synthetase [Homo sapiens]
          Length = 712

 Score =  609 bits (1571), Expect = e-172,   Method: Composition-based stats.
 Identities = 242/649 (37%), Positives = 358/649 (55%), Gaps = 24/649 (3%)

Query: 2   PSDIKLTFPDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
              IK+T PDG   +      T   +A  IS+ LA   V   +N  V DL  P+  + ++
Sbjct: 68  SKPIKVTLPDGKQVDAESWKTTPYQIACGISQGLADNTVIAKVNNVVWDLDRPLEEDCTL 127

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQP-FSSDE 118
           E++  ED  + AV  HS AHIM E ++ ++    +  GP IE+GFYYD   E+   SS++
Sbjct: 128 ELLKFEDEEAQAVYWHSSAHIMGEGMERVYGGC-LCYGPPIENGFYYDMYLEEGGVSSND 186

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
            + +E   ++II     F +  +  E    +F+     +K  IL         T+YR G 
Sbjct: 187 FSSLEALCKKIIKEKQAFERLEVKKETLLAMFKY--NKFKCRILNEKVNTPTTTVYRCGP 244

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLCRGPHVR TG++K   K+ K +  YW G ++   L RIYG ++   + L ++  F 
Sbjct: 245 LIDLCRGPHVRHTGKIK-ALKIHKNSSTYWEGKADMETLQRIYGISFPDPKMLKEWEKFQ 303

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
           EE++ RDHRK+ R+ +L+   E   G  F+  KG  I+  LI ++R + +   ++E+ TP
Sbjct: 304 EEAKNRDHRKIGRDQELYFFHELSPGSCFFLPKGVYIYNALIEFIRSEYRKRGFQEVVTP 363

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  LW  SGHW  Y  NMF+ +       +   FALKPMNCPGH  +F+H  +S+RE
Sbjct: 364 NIFNSRLWMTSGHWQHYSENMFSFEV------EKELFALKPMNCPGHSLMFDHRPRSWRE 417

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+RLA+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E     + + ++Y  
Sbjct: 418 LPLRLADFGGLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSV 477

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF   +  LSTRPEK +G   +WD AE  ++  L+      +      +  G+GAFYGP
Sbjct: 478 FGFSFKLN-LSTRPEKFLGDIEVWDQAEKQLENSLNEFGEKWE------LNSGDGAFYGP 530

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE-KCHPVMIHRAVFGSIERFIG 536
           K +  +KDAIGR  QC TIQ+DF LP RFN  YV+   E K  PV++HRA+ GS+ER I 
Sbjct: 531 KIDIQIKDAIGRYHQCATIQLDFQLPIRFNLTYVSHDGEDKKRPVIVHRAILGSVERMIA 590

Query: 537 IMIENFKGNL-PLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYK 594
           I+ EN+ G L P WLSP Q +V  +  +  EYAQ +           + D     T+N K
Sbjct: 591 ILTENYGGKLAPFWLSPRQVMVVPVGPTCDEYAQNVRQQFHDAKFMADIDLDPGCTLNKK 650

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           IR   + +   I++ G+KE    ++ IR   +    + ++ + I  L +
Sbjct: 651 IRNAQLAQYNFILVVGEKEKITGTVNIRTRDNKVHGERTISETIERLQQ 699


>gi|313235460|emb|CBY19737.1| unnamed protein product [Oikopleura dioica]
          Length = 800

 Score =  609 bits (1570), Expect = e-172,   Method: Composition-based stats.
 Identities = 236/650 (36%), Positives = 366/650 (56%), Gaps = 22/650 (3%)

Query: 1   MPSD-IKLTFPDGSIKN-FPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EG 57
           MP + IK+T PDG++K       T  D+A+SIS  LA   V   +NG+V DL+  +  + 
Sbjct: 135 MPKNPIKVTLPDGAVKEGTSWETTPLDIAKSISSGLANVVVCAKVNGQVWDLTRKLEGDC 194

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPF--S 115
           SIE++   D        HS AHI+ E ++  +    +  GP IEDGFYYD         S
Sbjct: 195 SIELLKFSDKEGKETYWHSSAHILGECMERYFGGA-LCYGPDIEDGFYYDMWMGNTTISS 253

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
             ++ ++EK   +++    PF +  ++ ++  ++F+     +K  ++      +  T+Y+
Sbjct: 254 EADMPKLEKLYYQMMKEKQPFQRLNVTKQQLIDMFK--HNPFKQRLIAEKNIGDT-TVYK 310

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
            G   D+CRGPH+  TG+ K   KL K +  YW G +++  L R+YG  +  +++LT+++
Sbjct: 311 CGNLIDMCRGPHLPHTGKAK-ACKLYKTSATYWEGKADQESLQRVYGITFPDKKQLTEWV 369

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEI 294
            F EE++KRDHR++  + +L+      +G  FW  +G  I+  L  ++R + +   ++E+
Sbjct: 370 NFQEEAKKRDHRRIGTQQELWTFDPVSAGSCFWLPRGAVIYNRLQDFIRSEYRKRGFKEV 429

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
            TP + +  LW+ SGHW  Y  +MF  K  DD       +A+KPMNCPGH  +F   L+S
Sbjct: 430 VTPNIFNSELWKTSGHWQHYEDDMFTFKVEDDK------WAMKPMNCPGHCVMFGSRLRS 483

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           Y+ELP+R A+FG ++RNE SG+L GL RVR F QDDAH+FC +EQ+  E     +    +
Sbjct: 484 YKELPLRFADFGVLHRNELSGALSGLTRVRRFQQDDAHIFCAREQIEGEITAALDFFKFV 543

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           Y  FGF   +  LSTRPEK +G  A WD+AE ++K  L+T  ++++ +    +  G+GAF
Sbjct: 544 YDTFGFTFELN-LSTRPEKYLGEVADWDEAEGMLKNALNTFCSTNETK--WELNPGDGAF 600

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  + DA+ R  Q  TIQ+DF LP RF   +V   +++  PVMIHRA+ GSIER 
Sbjct: 601 YGPKIDIKILDALKRRHQLATIQLDFQLPQRFKLKFV-RDNKEETPVMIHRAILGSIERC 659

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FRNETINY 593
           + I+ E+F G  P WLSP Q  V  I  S V +AQ IAN L    L  E D    +T NY
Sbjct: 660 VAILTESFGGKWPFWLSPRQVRVVPIGKSQVPFAQSIANKLFDAGLEAEADPDCADTFNY 719

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +IR   +++   I++ GDKE    +  +R   +     + +   +  L +
Sbjct: 720 RIRRAQLEQWNFILVVGDKELEAGTCAVRTRDAQQHGVLDVDFVVDELVR 769


>gi|15081626|gb|AAK82468.1| AT5g26830/F2P16_90 [Arabidopsis thaliana]
 gi|29028762|gb|AAO64760.1| At5g26830/F2P16_90 [Arabidopsis thaliana]
          Length = 676

 Score =  609 bits (1570), Expect = e-172,   Method: Composition-based stats.
 Identities = 239/650 (36%), Positives = 369/650 (56%), Gaps = 24/650 (3%)

Query: 3   SDIKLTFPDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIE 60
             IK+T PDG++K       T  D+A  IS+ LA  A+  A++  + D++ P+  +  +E
Sbjct: 40  DPIKVTLPDGNVKEGKKWETTPMDIAAQISKGLANSALISAVDDVLWDVNRPLEGDCKLE 99

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII--EDGFYYD-FDKEQPFSSD 117
           +   +  +    + HS AHI+ +A++  +   Q+ IGP     +GFYYD F  E   S +
Sbjct: 100 LFKFDSDKGRDTLWHSSAHILGQALEQEY-GCQLCIGPCTTRGEGFYYDGFYGELGLSDN 158

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
               IE    +      PF +  ++ ++A E+F      +KVE++  +PA   +T+YR G
Sbjct: 159 HFPSIEAGAAKAAKEAQPFERIEVTKDQALEMFSENN--FKVELINGLPADMTITVYRCG 216

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
              DLCRGPH+ +T  VK F K ++ + AYW+GD +R  L R+YG ++  Q++L +YL F
Sbjct: 217 PLVDLCRGPHIPNTSFVKAF-KCLRASSAYWKGDKDRESLQRVYGISYPDQKQLKKYLQF 275

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINT 296
           LEE++K DHR L ++ +LF   +   G  F+   G +++  L+ +++ +     Y E+ T
Sbjct: 276 LEEAKKYDHRLLGQKQELFFSHQLSPGSYFFLPLGTRVYNRLMDFIKNQYWHRGYTEVIT 335

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P + +  LWQ SGH D+Y+ NMF          + + F LKPMNCPGH  +F H ++SYR
Sbjct: 336 PNMYNMELWQTSGHADNYKDNMFTFNI------EKQEFGLKPMNCPGHCLIFQHRVRSYR 389

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ELP+RLA+FG ++RNE SG+L GL RVR F QDDAH+FCT EQ+  E   +   I  +YK
Sbjct: 390 ELPMRLADFGVLHRNEASGALSGLTRVRRFQQDDAHIFCTTEQVKGEVQGVLEFIDYVYK 449

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
            FGF   + KLSTRPEK +G    WD AE  +K  ++             +  G+GAFYG
Sbjct: 450 VFGFTYEL-KLSTRPEKYLGDLETWDKAEADLKEAIEAFGKP------LVLNEGDGAFYG 502

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC-HPVMIHRAVFGSIERFI 535
           PK +  + DA+ R +QC T+Q+DF LP RFN  Y      K   PVMIHRAV GS+ER  
Sbjct: 503 PKIDITVSDAMNRKFQCATLQLDFQLPIRFNLEYAAEDEAKKSRPVMIHRAVLGSVERMF 562

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            I++E++KG  P W+SP QAIV  I+  + +YA+++   +K     ++ D  +  I+ K+
Sbjct: 563 AILLEHYKGKWPFWISPRQAIVCPISEKSQQYAEKVQKQIKDAGFYVDADLTDRKIDKKV 622

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           RE  + +   I++ G+ EA+   + +R   +      S+ D +     ++
Sbjct: 623 REAQLAQYNYILVVGETEAATGQVSVRVRDNAAHSVKSIEDLLEEFKAKT 672


>gi|320451414|ref|YP_004203510.1| threonyl-tRNA synthetase [Thermus scotoductus SA-01]
 gi|320151583|gb|ADW22961.1| threonyl-tRNA synthetase [Thermus scotoductus SA-01]
          Length = 659

 Score =  609 bits (1569), Expect = e-172,   Method: Composition-based stats.
 Identities = 271/657 (41%), Positives = 401/657 (61%), Gaps = 25/657 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           + +  PDG        AT  DVA +I   LAK AV   +NG+V DL  P+  G+ + I+T
Sbjct: 1   MVVYLPDGKALEVEEGATAWDVARAIGPGLAKAAVGALVNGEVYDLLKPLPPGAQVRILT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPE-------VQVAIGPIIEDGFYYDFDKEQPFSS 116
            +DP    + RH+ AH++A+AV+  + E       V++ +GP+IE GFYYD D  +P S 
Sbjct: 61  EKDPEYQLLFRHTLAHVLAQAVKEFFAEKGYDPESVKLGVGPVIEKGFYYDIDAPEPISD 120

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
           ++L  IE+KM+ IIA+D P  +  L  E A   ++  K+ YK E++  +P  E ++ Y+Q
Sbjct: 121 EDLPAIEEKMRAIIAKDLPLRRYVLPREVALSRYQG-KDPYKTELILDLPEDEEISFYQQ 179

Query: 177 GE----WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELT 232
           G+    + DLCRGPHV STG++   FKL  VAGAYWRGD  RPML R+YG A+ T +EL 
Sbjct: 180 GDEAYGFTDLCRGPHVPSTGRIPPHFKLTHVAGAYWRGDEKRPMLQRVYGVAFRTAEELK 239

Query: 233 QYLYFLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRRK-IKDD 290
           +YL+ LEE++KRDHR+L RE++LF I      G++ W  KG  I + L+++MR + I+  
Sbjct: 240 EYLWQLEEAKKRDHRRLGRELELFLIDPMVGKGLVLWLPKGNVIREELMAFMREEQIRRG 299

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH 350
           Y+ + TP +    L++ SGH+  Y  + F      +   +   + LKPMNCP H+ ++  
Sbjct: 300 YQLVTTPHIGSLELYRTSGHYPYYAESQFPPISFKER-GEEEEYLLKPMNCPHHIRIYAF 358

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
             +SYRELP+RLAEFG+VYR E +G L GL RVRGFTQDDAH+FCT EQ+  E L + +L
Sbjct: 359 KKRSYRELPLRLAEFGTVYRYEKAGELLGLTRVRGFTQDDAHLFCTPEQVKEEFLGVLDL 418

Query: 411 IISIYKDFGFEKIMVKLSTRPEK---RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGV 467
           ++ +    G +    ++ TR  K    VG +A W  AE  ++        + +  ++  V
Sbjct: 419 VLKVLSTLGLKDYRARIGTRDPKSDKYVGDEAKWSLAERQIEEA------ALEAGLHYTV 472

Query: 468 LLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAV 527
             G+ AFYGPK ++++KDA+GR+WQ GTIQVD+NLP RF   YV     +  PVMIHRA 
Sbjct: 473 EEGDAAFYGPKLDFVVKDALGREWQLGTIQVDYNLPERFGLTYVGPDGAEHRPVMIHRAP 532

Query: 528 FGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR 587
           FGS+ERFIGI+IE+F G+ PLWL+P+Q +V  ++    +YA+E+   LK   L  E D R
Sbjct: 533 FGSLERFIGILIEHFAGDFPLWLAPVQVVVVPVSEKQEDYAKEVVFKLKEAGLRAEADLR 592

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            E +  +IR+  ++K+P +++ GD+E +E ++ +RR        + L   +    KE
Sbjct: 593 PERMQARIRDAEVQKVPYVLVVGDREKAEGTVSVRRRHRGNLGSMPLAAFLEAALKE 649


>gi|322437350|ref|YP_004219562.1| threonyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9]
 gi|321165077|gb|ADW70782.1| threonyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9]
          Length = 687

 Score =  609 bits (1569), Expect = e-172,   Method: Composition-based stats.
 Identities = 265/680 (38%), Positives = 382/680 (56%), Gaps = 54/680 (7%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKK-------AVAVA-IN---------- 44
           S I++  PDGSI+  P   T  ++A SIS  LA          +A   IN          
Sbjct: 8   STIRVQLPDGSIREVPSGTTPLEIATSISPRLAAVVVVAKVKPMAGLDINQSEGGQDDAP 67

Query: 45  -----------------GKVCDLSDPV-REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQ 86
                             ++ DL+ P+  +  + ++  +D  SL V+RHS AH+MA A+ 
Sbjct: 68  DAGSEEAMYDAALSPSAERIIDLAMPLAEDVELWLLKEQDEESLKVLRHSTAHVMATAIL 127

Query: 87  SIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKA 146
            ++PE ++  GP  + GF+YD  +E PF+ D+LA IEK+M E++AR+  F+K+    E A
Sbjct: 128 ELFPETKLGHGPATDAGFFYDVYRETPFTEDDLAAIEKRMGEVVARNDAFVKETEPREDA 187

Query: 147 RELFESKKEAYKVEILESIP-AKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAG 205
            + + ++ E  KV  +E    A E V+LYR G + D CRGPHV STG+VK F K+  VAG
Sbjct: 188 LQEYAAEGEFMKVHFIERFTQAGEPVSLYRNGGFTDFCRGPHVPSTGRVKAF-KVTSVAG 246

Query: 206 AYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGS-G 264
           AYW GD     L RIYGTA+   +++  +   LEE + RDHR L +++DLF I E    G
Sbjct: 247 AYWLGDEKNQQLQRIYGTAFFNAKDMDAHFKRLEEIKARDHRVLGKQLDLFSIQEVAGAG 306

Query: 265 VIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKC 323
           +IFWH KG  I + +  +MR    K  YE + TP ++ + LW+ SGH ++Y  NM+    
Sbjct: 307 LIFWHPKGGLIRKAMEDWMREDCIKRGYEMVFTPHIMRRELWKISGHEENYGENMYPPME 366

Query: 324 ADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRV 383
            DD       + LKPMNCPGH+ ++ +  KSYR+LPVR AE G+VYR E SG++HGL+RV
Sbjct: 367 LDDA-----EYRLKPMNCPGHILIYKNSPKSYRDLPVRYAELGNVYRYERSGTMHGLLRV 421

Query: 384 RGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK---LSTRPEKRVGSDAL 440
           RGFTQDDAH+FCT  Q+ +E         S+   FGF +  V+        +K +GS   
Sbjct: 422 RGFTQDDAHIFCTPGQIEDEVTACIEFAESVLNTFGFHEFKVELSTWDPNDKKFIGSAEQ 481

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDF 500
           W  A   ++  L+      +  I    + GE AFYGPK +  L D +GR WQ  T+Q D+
Sbjct: 482 WGVAVGSLRNALE------RKGIPYKTIPGEAAFYGPKIDIKLVDVLGRMWQLSTVQFDW 535

Query: 501 NLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTI 560
           NLP+RF+  Y     E   PVM+HRA+FGS+ERF G++IE++ G  P WL+P+Q  +  I
Sbjct: 536 NLPARFDLHYKGEDGELHQPVMVHRALFGSVERFFGVLIEHYAGAFPFWLAPVQVGLVPI 595

Query: 561 TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
           +   +EYA+ +   LK   + +E D RNE +N KIRE  + K+P I+I GDKE+    + 
Sbjct: 596 SEKHLEYARTVQQRLKDAGVRVELDERNEKMNAKIREFGVNKVPFILIMGDKESQSDEVS 655

Query: 621 IRRFGSTTTQKVSLLDAIPI 640
           +R  G      +S    +  
Sbjct: 656 VRTRGKGDGGAMSTEAFVAR 675


>gi|224099691|ref|XP_002311580.1| predicted protein [Populus trichocarpa]
 gi|222851400|gb|EEE88947.1| predicted protein [Populus trichocarpa]
          Length = 678

 Score =  609 bits (1569), Expect = e-172,   Method: Composition-based stats.
 Identities = 228/648 (35%), Positives = 366/648 (56%), Gaps = 24/648 (3%)

Query: 3   SDIKLTFPDGSIKNF-PVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIE 60
             IK+T PDG++K      ++  D+A+ I +S+A  A+   +NG + D++ P+ +   ++
Sbjct: 42  DSIKITLPDGTVKEGKRWESSPMDIAKEIGKSVAGNALISQVNGVLWDMNRPLEDDCELK 101

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII--EDGFYYD-FDKEQPFSSD 117
           I   E         HS AHI+ +A++  +   ++ IGP     +GFYYD F  E   + D
Sbjct: 102 IFNFESDEGRDTFWHSSAHILGQALEMEY-GCKLCIGPCTTRGEGFYYDAFYGELGLNDD 160

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
              +I+    + +A   PF +  +S E+A E+       +KVEI++ +PA + +T+YR G
Sbjct: 161 HFKKIDAAALKAVAEKQPFERIEVSREQALEM--FSDNNFKVEIIKDLPADKTITVYRCG 218

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
              DLCRGPH+ +T  VK     +K + AYWRG+ +R  L R+YG ++  ++ L +Y  F
Sbjct: 219 PLVDLCRGPHIPNTSFVK-ALACLKASSAYWRGNRDRESLQRVYGISYPDKKRLQEYKQF 277

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINT 296
           LEE++K DHR L  + +LF       G  F+   G +++  L+ +++ + +   YEE+ +
Sbjct: 278 LEEAKKYDHRLLGIKQELFFCHPLSPGSWFFLPHGTRVYNKLMQFIKDEYRKRGYEEVKS 337

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P + +  LW+ SGH  +Y+ NMF ++       + + F LKPMNCPGH  +F H ++SYR
Sbjct: 338 PNIFNMKLWETSGHAANYKENMFLLEI------ENQEFGLKPMNCPGHCLMFQHRVRSYR 391

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ELP+RLA+FG+++RNE SG+L GL RVR F QDDAH+FC K Q+ +E   +   I   Y 
Sbjct: 392 ELPLRLADFGALHRNEASGALTGLTRVRRFQQDDAHIFCRKSQIKDEVRGVLEFIDYTYG 451

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
            FGF   + KLSTRPEK +G    WD+AE  +   LD      +      +  G+GAFYG
Sbjct: 452 KFGFTYEL-KLSTRPEKYLGVLETWDEAEKALTEALDEFGKPWK------IDEGDGAFYG 504

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK-CHPVMIHRAVFGSIERFI 535
           PK +  + DA+ R +QC T+Q+DF LP RF   Y      +   PVMIHRA+ GS+ER  
Sbjct: 505 PKIDISVSDALKRKFQCATLQLDFQLPDRFKLEYSAEDEARSEAPVMIHRAILGSVERMF 564

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            I++E++KG  P WLSP QAIV  ++  +  YA ++ + +      ++ D  +  I  K+
Sbjct: 565 AILLEHYKGKWPFWLSPRQAIVCPVSEKSQSYALQVRDQIHEAGYYVDVDATDRKIQKKV 624

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           RE  + +   I++ G++E+    + +R   +     +S+   + +  +
Sbjct: 625 REAQLAQYNYILVVGEEESKTGQVSVRVRDNADHSVMSIESLLGLFKE 672


>gi|149173541|ref|ZP_01852171.1| threonyl-tRNA synthetase [Planctomyces maris DSM 8797]
 gi|148847723|gb|EDL62056.1| threonyl-tRNA synthetase [Planctomyces maris DSM 8797]
          Length = 726

 Score =  609 bits (1569), Expect = e-172,   Method: Composition-based stats.
 Identities = 257/707 (36%), Positives = 389/707 (55%), Gaps = 72/707 (10%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG------ 57
            I++  PDG++K +   ++  DVA+SI   LA   VA  ++G VCD   P+++       
Sbjct: 1   MIQIKLPDGTVKEYADDSSALDVAQSIGERLANAVVAAEVDGTVCDAFRPLKDITDSEEI 60

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSD 117
           S+ ++T  D  +L V+RHSCAHIMA AV  +WP +Q+A GP +  GFYYDF  E   S D
Sbjct: 61  SLRLLTERDAEALGVMRHSCAHIMARAVMRLWPGIQLAFGPTLPHGFYYDFGLEHTISED 120

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-ENVTLYRQ 176
           +  +IE++M++II  + PF +  L  ++A        +  K E +++  A    ++ YRQ
Sbjct: 121 DFPKIEEEMKKIIKEEEPFERFSLDRDEAVSFVNEMDQHSKAEHIQTGLADHGKLSFYRQ 180

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           GE+ DLCRGPH+ + G+VK F KL+ +AG+YW+GD+    L R+YGTAW +++++ QYL 
Sbjct: 181 GEFVDLCRGPHIPNAGKVKAF-KLLSIAGSYWKGDAGNKPLQRLYGTAWFSKKDMKQYLE 239

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEI 294
            +EE+++RDHR L +++ LF I  +   G+  W  KG  I   L  +++ ++    Y+ +
Sbjct: 240 QVEEAKRRDHRVLGKKLGLFSINPEVGQGLCLWLPKGATIRAVLEDFIKVELTRLGYQPV 299

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT--------------------------- 327
            +P +    L++ SGH+  YR + FA     D                            
Sbjct: 300 YSPHIGRVELYETSGHFPYYRDSQFAPLFGHDAGQLVDFWVRKLEEDSLSAEDEELFFKS 359

Query: 328 --------------------------IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
                                           + LKPMNCP H  ++    +SYR+LPVR
Sbjct: 360 SRVMNCDFEFPPGASREEKLKILKAWEHKHERYLLKPMNCPHHAEMYKSMPRSYRDLPVR 419

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAEFG+VYR+E +G L+G++RVRG TQDDAH+FCT EQ+  E      L+  +    G +
Sbjct: 420 LAEFGTVYRHEQTGELNGMLRVRGLTQDDAHIFCTPEQVEEEFRATLELVKFVLASVGLD 479

Query: 422 KIMVKLSTRPE---KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
              V+LS R     K VGS+  W  AEN ++ VL+    S           GE AFYGPK
Sbjct: 480 NFRVQLSLREPGSDKYVGSEENWQHAENSLRKVLEASGMS------YSECEGEAAFYGPK 533

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++++ D IGR+WQ GT+Q+D+NLP RF   Y  S ++   PVMIHRA FGS+ERF G++
Sbjct: 534 ADFMVSDCIGREWQLGTVQLDYNLPERFKLEYTGSDNQPHRPVMIHRAPFGSMERFTGML 593

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+F G  PLWL+P Q  V  ++   ++YA E+   L+ +   +  D R+  +N KIR+ 
Sbjct: 594 IEHFAGAFPLWLAPEQIRVLPVSDKTLDYANEVVAQLRKNGFRVSIDTRSSKVNAKIRDA 653

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
            ++ IP + I G KEA + ++ +R         + L DAI  L +E+
Sbjct: 654 QLELIPYMFIVGPKEAEQTAVAVRDRIDGDLGPMPLADAIAKLKQEA 700


>gi|289548737|ref|YP_003473725.1| threonyl-tRNA synthetase [Thermocrinis albus DSM 14484]
 gi|289182354|gb|ADC89598.1| threonyl-tRNA synthetase [Thermocrinis albus DSM 14484]
          Length = 645

 Score =  608 bits (1568), Expect = e-172,   Method: Composition-based stats.
 Identities = 273/643 (42%), Positives = 401/643 (62%), Gaps = 21/643 (3%)

Query: 11  DGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRS 69
           DG     P      +V         + A+A  +  ++ DL  PVREG  I+ I   DP S
Sbjct: 9   DGKEIEVPKGTPLGEVFRLAG---VQDAIAGRLGDRILDLQTPVREGGKIKPIRKGDPES 65

Query: 70  LAVIRHSCAHIMAEAVQSIWPE--VQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQIEKKM 126
           L V+RH+ +HIMA+A++ I+    V + +GP  E+GFYYD + E      ++L  IE++M
Sbjct: 66  LEVMRHTLSHIMAQALKEIYGYDRVHLGVGPTTEEGFYYDVEVEGISIREEDLPIIEERM 125

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGP 186
           ++I++R+ P ++Q +S E A +LFES KE YK++I+  I   + +++Y+QGE+ DLCRGP
Sbjct: 126 RQIVSRNLPIVRQEVSKEYALKLFESLKEPYKLDIINRIQEGDVISVYQQGEFVDLCRGP 185

Query: 187 HVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDH 246
           HV STG V  F KL  VAGAYW GD+++PML RIYG A+  ++EL   L F EE ++RDH
Sbjct: 186 HVPSTGMVGAF-KLTHVAGAYWMGDASKPMLQRIYGIAYWDEKELEDRLRFYEEVKRRDH 244

Query: 247 RKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHL 304
           RKL +E+++F I E+ G+G++ W  KG    + L  Y R + +K  Y+ + TP + +  L
Sbjct: 245 RKLGKELEMFMIDEEIGAGLVIWLPKGGIYRKVLEDYWREEHLKRGYQLVYTPHIGNAKL 304

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           WQ+SGH D YR NMF     +D       + +KPMNCP H+A++   ++SYR+LP RLAE
Sbjct: 305 WQKSGHLDHYRQNMFPPMELED-----EEYFVKPMNCPFHIAIYKSKVRSYRDLPFRLAE 359

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
            G+VYR E SG LHGLMRVRGFTQDDAH+ C  +Q+ +   +  +  IS+ +DFGF++  
Sbjct: 360 LGTVYRYEMSGVLHGLMRVRGFTQDDAHIICRPDQVDDVIQETLDFAISMLRDFGFDEFK 419

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           V +ST+PE  +GSD  W+ AE+ +K  ++++       +   +  G GAFYGPK +  ++
Sbjct: 420 VYISTKPEDAIGSDEQWEKAESALKKAVESMG------LEYEIDEGGGAFYGPKIDVKIR 473

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           DA+GR WQC TIQ DFNLP RF+  YV   + +  P MIHRA+ GSIERF G+++E+  G
Sbjct: 474 DALGRLWQCSTIQFDFNLPERFDMEYVGPDNRRHRPYMIHRAILGSIERFTGVLLEHHAG 533

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
            LP WL+P+Q  V  +    VEYA+ +AN L+     +E D R+E +  KIR+  ++KIP
Sbjct: 534 LLPFWLAPVQVRVLPVQERHVEYARSVANTLREEGFRVEVDERDERLGAKIRDAELQKIP 593

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLP 647
            ++I GDKE  + S+ +R        K+SL D +  L   +  
Sbjct: 594 YVLIVGDKEMQDGSVSVRGKREGDLGKMSLQDLLSFLRSANTK 636


>gi|313246933|emb|CBY35782.1| unnamed protein product [Oikopleura dioica]
          Length = 800

 Score =  608 bits (1568), Expect = e-172,   Method: Composition-based stats.
 Identities = 236/650 (36%), Positives = 366/650 (56%), Gaps = 22/650 (3%)

Query: 1   MPSD-IKLTFPDGSIKN-FPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EG 57
           MP + IK+T PDG++K       T  D+A+SIS  LA   V   +NG+V DL+  +  + 
Sbjct: 135 MPKNPIKVTLPDGAVKEGTSWETTPLDIAKSISSGLANVVVCAKVNGQVWDLTRKLEGDC 194

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPF--S 115
           SIE++   D        HS AHI+ E ++  +    +  GP IEDGFYYD         S
Sbjct: 195 SIELLKFSDKEGKETYWHSSAHILGECMERYFGGA-LCYGPDIEDGFYYDMWMGNTTISS 253

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
             ++ ++EK   +++    PF +  ++ ++  ++F+     +K  ++      +  T+Y+
Sbjct: 254 EADMPKLEKLYYQMMKEKQPFQRLNVTKQQLIDMFK--HNPFKQRLIAEKNIGDT-TVYK 310

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
            G   D+CRGPH+  TG+ K   KL K +  YW G +++  L R+YG  +  +++LT+++
Sbjct: 311 CGNLIDMCRGPHLPHTGKAK-ACKLYKTSATYWEGKADQESLQRVYGITFPDKKQLTEWV 369

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEI 294
            F EE++KRDHR++  + +L+      +G  FW  +G  I+  L  ++R + +   ++E+
Sbjct: 370 NFQEEAKKRDHRRIGTQQELWTFDPVSAGSCFWLPRGAVIYNRLQDFIRSEYRKRGFKEV 429

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
            TP + +  LW+ SGHW  Y  +MF  K  DD       +A+KPMNCPGH  +F   L+S
Sbjct: 430 VTPNIFNSELWKTSGHWQHYEDDMFTFKVEDDK------WAMKPMNCPGHCVMFGSRLRS 483

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           Y+ELP+R A+FG ++RNE SG+L GL RVR F QDDAH+FC +EQ+  E     +    +
Sbjct: 484 YKELPLRFADFGVLHRNELSGALSGLTRVRRFQQDDAHIFCAREQIEGEITAALDFFKFV 543

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           Y  FGF   +  LSTRPEK +G  A WD+AE ++K  L+T  ++++ +    +  G+GAF
Sbjct: 544 YDTFGFTFELN-LSTRPEKYLGEVADWDEAEGMLKNALNTFCSTNETK--WELNPGDGAF 600

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  + DA+ R  Q  TIQ+DF LP RF   +V   +++  PVMIHRA+ GSIER 
Sbjct: 601 YGPKIDIKILDALKRRHQLATIQLDFQLPQRFKLKFV-RDNKEETPVMIHRAILGSIERC 659

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FRNETINY 593
           + I+ E+F G  P WLSP Q  V  I  S V +AQ IAN L    L  E D    +T NY
Sbjct: 660 VAILTESFGGKWPFWLSPRQVRVVPIGKSQVPFAQSIANKLFDAGLEAEADPDCADTFNY 719

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +IR   +++   I++ GDKE    +  +R   +     + +   +  L +
Sbjct: 720 RIRRAQLEQWNFILVVGDKELEAGTCAVRTRDAQQHGVLHVDFVVDELVR 769


>gi|237755902|ref|ZP_04584494.1| threonyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense SS-5]
 gi|237691927|gb|EEP60943.1| threonyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense SS-5]
          Length = 643

 Score =  608 bits (1568), Expect = e-172,   Method: Composition-based stats.
 Identities = 269/648 (41%), Positives = 415/648 (64%), Gaps = 21/648 (3%)

Query: 4   DIKLTFPDGSIK-NFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEI 61
            I++   D + K  F    T  D+ +++     K  V   +N ++ D+  P+ + G+++ 
Sbjct: 1   MIEIFIEDLNQKFTFNEGITLKDILKNL-NGKFKDVVGGKLNSEIVDIHTPINQSGNLKF 59

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPE--VQVAIGPIIEDGFYYDFDKE-QPFSSDE 118
           +  ED  SL ++RHS AHIMA+A++ I+ +  V + IGP  E GFYYD + E +  + ++
Sbjct: 60  LKKEDKESLEILRHSLAHIMAQALKEIYGDENVHLGIGPTTEHGFYYDVEIEGKRLTDED 119

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE-SIPAKENVTLYRQG 177
           L QIE+KM+EII +     +  L  E+A + FE+KKE YK++I++ +IP  E ++LY+QG
Sbjct: 120 LPQIEEKMKEIIKKGYQIERFELPREEAIKFFENKKEIYKIDIIKHNIPEGEPISLYKQG 179

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           ++ DLCRGPH+ ST +   F KL+ V+GAYWRG    PML RIYG A+ +++EL  YL  
Sbjct: 180 DFVDLCRGPHLPSTDKAGAF-KLIYVSGAYWRGKETNPMLQRIYGVAFWSEKELKDYLNM 238

Query: 238 LEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLIS-YMRRKIKDDYEEIN 295
           LEE++KRDHRK+ ++++LF I E+ G G+  W  KG  I + +   + +  +K  Y+ + 
Sbjct: 239 LEEAKKRDHRKIGKDLELFLIDEEIGGGLAIWLPKGAIIRKEIEDAWKKEHLKRGYQLVY 298

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP V  + LWQ SGH   Y+ NM+          +   + +KPMNCP HV ++    +SY
Sbjct: 299 TPHVGKEQLWQTSGHLSLYQENMYPRMQI-----EEEGYYVKPMNCPFHVEIYKSKQRSY 353

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           +ELP+RLAE G+VYR E SG+LHGLMRVRGFTQDDAH+ C ++Q+ +E  ++ NL ++  
Sbjct: 354 KELPIRLAELGTVYRYERSGALHGLMRVRGFTQDDAHIICREDQVEDEIREVLNLALNTL 413

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           K +GF++  V LST+PEK VG D +W+ AEN ++  +++        ++  +  G GAFY
Sbjct: 414 KSYGFDEFEVYLSTKPEKYVGDDKMWEIAENSLRKAIESTG------LDYKIDEGGGAFY 467

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +KDAIGR WQC TIQ DFNLP RF+ +Y+   ++K  P MIHRA+FGSIERFI
Sbjct: 468 GPKIDVKIKDAIGRLWQCSTIQFDFNLPERFDMYYIGEDNQKHRPYMIHRAIFGSIERFI 527

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
           G+++E++ G LP+WLSP+Q  +  I    +EYA+ +   L  + + +E D RNE +N KI
Sbjct: 528 GVLLEHYAGFLPVWLSPVQVKIIPIADKHLEYAETVKQKLLENDIRVELDDRNERMNKKI 587

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           R+  ++KIP +++ GDKEA   ++ +R  G   +Q +S+ + +  + +
Sbjct: 588 RDAELQKIPFMLVVGDKEAETGTVAVREKGKQGSQTLSIDEFVSKIKE 635


>gi|241678425|ref|XP_002412596.1| threonyl-tRNA synthetase, putative [Ixodes scapularis]
 gi|215506398|gb|EEC15892.1| threonyl-tRNA synthetase, putative [Ixodes scapularis]
          Length = 692

 Score =  608 bits (1568), Expect = e-172,   Method: Composition-based stats.
 Identities = 244/660 (36%), Positives = 359/660 (54%), Gaps = 27/660 (4%)

Query: 2   PSDIKLTFPDGSIKNF-PVHATGSDVA-ESISRSLAKKAVAVAINGKVCDLSDPVR-EGS 58
              IK+T PDG + +      T   +A E IS+ LA   V   ++G + DL  P+  + S
Sbjct: 49  SEPIKVTLPDGRVLDAQSWKTTPYTLAAEGISKGLADSVVIAKVDGVLWDLDRPLEADCS 108

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF--DKEQPFSS 116
           ++++  +DP    V  HS AHIM EA++ I+    +  GP IE GFYYD   D  Q  S+
Sbjct: 109 LQLLKFDDPEGQQVFWHSSAHIMGEALERIYGGC-LCYGPPIEGGFYYDMHLDGGQGVSA 167

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
            +   IE+ M+ I+    PF +  L  E+   +F+     +KV IL+        T+YR 
Sbjct: 168 VDHPSIEQLMRSIVKEKQPFERLELPKEELLRMFQY--NPFKVRILQEKVTTPTTTVYRC 225

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           G   DLCRGPHVR TG+VK   ++ K + AYW G ++   L R+YG ++   ++L ++  
Sbjct: 226 GPLIDLCRGPHVRHTGKVK-ALQVTKNSSAYWEGKADAEALQRVYGISFPDAKQLKEWQK 284

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEIN 295
           F EE+ KRDHRK+ RE +LF   E   G  F+   G  I+ TL+  ++ +     ++E+ 
Sbjct: 285 FQEEAAKRDHRKIGREQELFFFHELSPGSCFFQPNGAYIYNTLVDMIKAEYNKRGFQEVV 344

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP + +  LW  SGHW  Y+ NMF+         +  TFALKPMNCPGH  +F+   +S+
Sbjct: 345 TPNMYNSKLWLTSGHWQHYQDNMFSFDV------EKETFALKPMNCPGHCLMFDVRPRSW 398

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP+R+A+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E       +  IY
Sbjct: 399 RELPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCASEQIASEMKGALEFLKHIY 458

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
             FGF   + KLSTRPE  +G   +W+DAE  ++  L+             +  G+GAFY
Sbjct: 459 SIFGFTFKL-KLSTRPEGFLGDIEVWNDAEKQLEQSLNDFGYPW------TLNPGDGAFY 511

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  + DA+ R  QC TIQ+DF LP RFN  Y++   EK  PV+IHRA+ GS+ER I
Sbjct: 512 GPKIDITIMDALRRQHQCATIQLDFQLPIRFNLSYISETGEKKRPVIIHRAILGSVERMI 571

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYK 594
            I+ EN+ G  P WLSP Q  +  +     +YA E+   L +     + D     T+N K
Sbjct: 572 AILTENYGGKWPFWLSPRQVTMVPVGPMYDDYALEVKRQLCAAGFRCDADLDPGNTMNKK 631

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT--KESLPPDCQK 652
           IR   + +   I+  G    +  ++ +R   +    + S+ D I   +  K    PD ++
Sbjct: 632 IRNAQLDQYNFIL-GGLPAKTSGTVNVRTRDNKVHGEFSVADVIERFSRLKREFVPDSEE 690


>gi|317503053|ref|ZP_07961132.1| threonine--tRNA ligase [Prevotella salivae DSM 15606]
 gi|315665826|gb|EFV05414.1| threonine--tRNA ligase [Prevotella salivae DSM 15606]
          Length = 649

 Score =  608 bits (1568), Expect = e-172,   Method: Composition-based stats.
 Identities = 249/650 (38%), Positives = 392/650 (60%), Gaps = 19/650 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            +K+TFPDGS++ +    TG  +AESIS +LA+  V+  +NG+  +L+ P+  + +  + 
Sbjct: 1   MVKITFPDGSVREYEQGVTGLQIAESISPALARNVVSCGVNGETVELNRPINEDANFTLY 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD--FDKEQPFSSDELA 120
             ED        H+ AH++AEA+Q ++P++Q   GP +E+GF+YD    + Q  S ++ A
Sbjct: 61  KFEDEEGKRTFWHTSAHLLAEALQELYPQIQFGFGPAVENGFFYDVMPAEGQVISENDFA 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IE KM E+  +D P +++ +S  +A + F++  + YK E +E       +T Y QG + 
Sbjct: 121 KIEAKMLELAKKDEPVVRKEVSKAEALKEFKADGQTYKCEHIEQDLEDGTITTYTQGNFT 180

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ STG +K   KL  VAGA+WRGD+ R  ++RIYG ++  ++ L +YL  LEE
Sbjct: 181 DLCRGPHLVSTGVIK-AVKLTSVAGAFWRGDAEREQMTRIYGISFPKKKMLDEYLVMLEE 239

Query: 241 SEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++KRDHRK+ +EM+LF  +   G G+  W  KG ++   L   +R  +    Y+E+ TP 
Sbjct: 240 AKKRDHRKIGKEMELFMFSDRVGKGLPIWLPKGTQLRLRLQKLLRSLLRPYHYQEVITPG 299

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +  + L+  SGH+  Y  + F       T ++   + LKPMNCP H  V+    +SY++L
Sbjct: 300 IGGKSLYVTSGHYAHYGKDAFQ---PIHTPEEDEEYMLKPMNCPHHCEVYARKPRSYKDL 356

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG+V+R E SG LHGL RVR FTQDDAH+F   +Q+ +E     ++I+ ++K F
Sbjct: 357 PLRIAEFGTVFRYEKSGELHGLTRVRTFTQDDAHIFVRPDQVKSEFETNIDIILKVFKTF 416

Query: 419 GFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            F+    ++S R  K     +GSD +W+++EN ++         + + I      GE AF
Sbjct: 417 HFDNYEAQISLRDPKDKEKYIGSDEIWEESENAIREACKEKGLVAHEEI------GEAAF 470

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK ++++KDAIGR WQ GTIQVD+NLP+RF   Y    + K  PVMIHRA FGS+ERF
Sbjct: 471 YGPKLDFMVKDAIGRKWQLGTIQVDYNLPARFKLEYTAEDNTKKTPVMIHRAPFGSLERF 530

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             ++IE+  G+ PLWL+P Q  +  I+    +YA+++     +  +    D RNE I  K
Sbjct: 531 TAVLIEHTAGHFPLWLTPDQVAILPISEKYNDYAKQVGQYFDTVGVRSVIDDRNEKIGRK 590

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IR++ +K+IP ++I G+KEA+E  + +R+ G      + + +    +T E
Sbjct: 591 IRDNELKRIPYMVIVGEKEAAEGLVSMRKQGGGEQATMKMEEFAKRITDE 640


>gi|291287861|ref|YP_003504677.1| threonyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
 gi|290885021|gb|ADD68721.1| threonyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
          Length = 637

 Score =  608 bits (1568), Expect = e-172,   Method: Composition-based stats.
 Identities = 274/643 (42%), Positives = 403/643 (62%), Gaps = 21/643 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           + +  PDG+       AT  DVA+ IS  LAKKA+A  ING   D+   + +G ++++IT
Sbjct: 1   MNVLLPDGAKLEIQDGATAYDVAKQISVGLAKKAIAAEINGTSKDIYAELSDGDTVKLIT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQI 122
            +DP +L +IRHS AH+MA AV+ ++ +V+V IGPII+DGFYYDFD  ++ F+ D+L  I
Sbjct: 61  EKDPEALDIIRHSTAHLMAHAVKRLFDDVKVTIGPIIKDGFYYDFDMGDRKFTPDDLKAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK M +I A   P  ++ +    A +  E   E YKVE++  I   E+V+LY QG++ DL
Sbjct: 121 EKMMAKIAAEAIPVKRRDVKSSDALK--EFADEKYKVELITDI-GDEHVSLYDQGDFTDL 177

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +T ++K F KL+ VAGAYWRG+ N  ML RIYGT+W T+++L  YL  LEE+E
Sbjct: 178 CRGPHVDNTKRLKHF-KLLSVAGAYWRGNENNKMLQRIYGTSWQTKEDLDAYLNMLEEAE 236

Query: 243 KRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQVL 300
           KRDHRK+ +++ LF  +E+   G   +   G  +   L +Y  +  IK  Y+ +  P +L
Sbjct: 237 KRDHRKIGKQLKLFTFSEEAGAGFPIYLPNGGALRNVLETYEKQEHIKRGYDIVYGPSIL 296

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            Q LW++SGH+D+YR NM+  K       D   + +KPMNC  H+ VFN  ++SYR+LP 
Sbjct: 297 KQDLWKKSGHYDNYRENMYFTKI------DDVDYGVKPMNCLAHMMVFNSDIRSYRDLPQ 350

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R  E G+V+R+E SG LHGL+RVR FTQDDAH+FCT EQ+ +E + I + +  +   FGF
Sbjct: 351 RYFELGTVHRHEKSGVLHGLLRVRAFTQDDAHLFCTPEQLNDEIIGIIDFVDEVMGKFGF 410

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           E  + ++ST+PEK +GSD  W+ A N +   L T        +   +  G+GAFYGPK +
Sbjct: 411 EYEI-EVSTKPEKYIGSDDNWEKATNALFEALKT------KGLEYEINEGDGAFYGPKID 463

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
             LKDAIGR WQC TIQ DFNLP +F+  Y+    +K  PVM+HR + GS++RFIG++ E
Sbjct: 464 IKLKDAIGRYWQCATIQADFNLPEKFDLNYIGEDGQKHRPVMLHRVILGSVDRFIGVLTE 523

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +F G  P+W++P Q  V  IT   ++Y + +   LK+    +++D RNE + +KIRE  +
Sbjct: 524 HFAGAFPVWVAPKQVRVINITDGQLDYCKALVQKLKAEGFRVDSDLRNEKVGFKIREAQM 583

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +KIP ++I G  E  +  + +R        ++     + +LT+
Sbjct: 584 EKIPHMLIIGQNEVDKELVSVRLRNGENKNELDFSTYLGVLTE 626


>gi|291404015|ref|XP_002718268.1| PREDICTED: threonyl-tRNA synthetase-like 2-like [Oryctolagus
           cuniculus]
          Length = 709

 Score =  608 bits (1568), Expect = e-172,   Method: Composition-based stats.
 Identities = 238/647 (36%), Positives = 353/647 (54%), Gaps = 23/647 (3%)

Query: 3   SDIKLTFPDGSIKNFPVH-ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIE 60
           S + +    G          T   VA +ISR LA+ AV   ++G++ DL  P++ + ++E
Sbjct: 67  SALTVRVAGGETVEGARGRTTPYQVAAAISRELAESAVVAKVDGELWDLDRPLQGDCTLE 126

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDEL 119
           ++T     + AV  HS AH++ EA++  +    +  GP IE+GFYYD   E +  SS EL
Sbjct: 127 LLTFHSEEAQAVYWHSSAHVLGEAMELYYGGH-LCYGPPIENGFYYDMFIEDRAVSSTEL 185

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             +E   + II    PF +  +S E   E+F+     +K  IL         T+YR G  
Sbjct: 186 PALENMCKAIIKERQPFERLEVSKEVLLEMFKY--NKFKCRILNEKVDTPTTTVYRCGPL 243

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLC+GPHVR TG++K   K+ K +  YW G      L RIYG ++   + +  +    E
Sbjct: 244 VDLCKGPHVRHTGKIK-AIKIFKNSSTYWEGSPEMETLQRIYGISFPDNKMMKTWEQVQE 302

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E++ RDHRK+ +E +LF   +   G  F+  +G  ++ TL+  +R +    D+ E+ +P 
Sbjct: 303 EAKNRDHRKIGKEQELFFFHDVSPGSCFFLPRGAFVYSTLMDLIREEYHKRDFLEVLSPN 362

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V +  LW+ SGHW  Y  NMF  +       +  TFALKPMNCPGH  +F H  +S+RE+
Sbjct: 363 VYNSKLWETSGHWQHYSENMFTFRV------EKETFALKPMNCPGHCLMFAHRPRSWREM 416

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           PVR A+FG ++RNE SG+L GL RVR F QDDAH+FCT EQ+  E       + S+Y  F
Sbjct: 417 PVRFADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCTVEQIEEEIKGCLQFLQSVYSTF 476

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF   +  LSTRPE  +G   +W +AE  ++  L       +      +  G+GAFYGPK
Sbjct: 477 GFTFQLN-LSTRPENFLGESEMWAEAEKQLQNSLVEFGKPWK------LNPGDGAFYGPK 529

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIGI 537
            +  +KDAIGR  QC TIQ+DF LP RFN  YV+    +K  PV+IHRA  GS+ER + I
Sbjct: 530 IDIKIKDAIGRYHQCATIQLDFQLPIRFNLTYVSKDGDDKKRPVIIHRATLGSVERMVAI 589

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FRNETINYKIR 596
           + EN  G  PLWLSP Q +V  +  +  +YA ++ N         + D   + T+N KIR
Sbjct: 590 LSENCGGKWPLWLSPRQVMVIPVGPTCEKYALQVYNEFFEEGFMADVDLDHSCTLNKKIR 649

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              + +   I++ G+KE +  ++ +R   +    ++S++ AI  L  
Sbjct: 650 NAQLAQYNFILVVGEKEMANNAVNVRTRDNKIHGEISVISAIEKLKN 696


>gi|194374367|dbj|BAG57079.1| unnamed protein product [Homo sapiens]
          Length = 756

 Score =  608 bits (1567), Expect = e-171,   Method: Composition-based stats.
 Identities = 241/681 (35%), Positives = 359/681 (52%), Gaps = 56/681 (8%)

Query: 2   PSDIKLTFPDGSIKNFP-VHATGSDVAESIS----------------------------- 31
              IK+T PDG   +      T   +A  IS                             
Sbjct: 80  SKPIKVTLPDGKQVDAESWKTTPYQIACGISHTASCKNLSSLASLLASVAIPSSGMPWPP 139

Query: 32  ----RSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQ 86
               + LA   V   +N  V DL  P+  + ++E++  ED  + AV  HS AHIM EA++
Sbjct: 140 LFFLQGLADNTVIAKVNNVVWDLDRPLEEDCTLELLKFEDEEAQAVYWHSSAHIMGEAME 199

Query: 87  SIWPEVQVAIGPIIEDGFYYDFDKEQP-FSSDELAQIEKKMQEIIARDSPFLKQYLSHEK 145
            ++    +  GP IE+GFYYD   E+   SS++ + +E   ++II     F +  +  E 
Sbjct: 200 RVYGGC-LCYGPPIENGFYYDMYLEEGGVSSNDFSSLEALCKKIIKEKQAFERLEVKKET 258

Query: 146 ARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAG 205
              +F+     +K  IL         T+YR G   DLCRGPHVR TG++K   K+ K + 
Sbjct: 259 LLAMFKY--NKFKCRILNEKVNTPTTTVYRCGPLIDLCRGPHVRHTGKIK-ALKIHKNSS 315

Query: 206 AYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGV 265
            YW G ++   L RIYG ++   + L ++  F EE++ RDHRK+ R+ +L+   E   G 
Sbjct: 316 TYWEGKADMETLQRIYGISFPDPKMLKEWEKFQEEAKNRDHRKIGRDQELYFFHELSPGS 375

Query: 266 IFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCA 324
            F+  KG  I+  LI ++R + +   ++E+ TP + +  LW  SGHW  Y  NMF+ +  
Sbjct: 376 CFFLPKGAYIYNALIEFIRSEYRKRGFQEVVTPNIFNSRLWMTSGHWQHYSENMFSFEV- 434

Query: 325 DDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVR 384
                +   FALKPMNCPGH  +F+H  +S+RELP+RLA+FG ++RNE SG+L GL RVR
Sbjct: 435 -----EKELFALKPMNCPGHCLMFDHRPRSWRELPLRLADFGVLHRNELSGALTGLTRVR 489

Query: 385 GFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
            F QDDAH+FC  EQ+ +E     + + ++Y  FGF   +  LSTRPEK +G   +WD A
Sbjct: 490 RFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSVFGFSFKLN-LSTRPEKFLGDIEVWDQA 548

Query: 445 ENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPS 504
           E  ++  L+      +      +  G+GAFYGPK +  +KDAIGR  QC TIQ+DF LP 
Sbjct: 549 EKQLENSLNEFGEKWE------LNSGDGAFYGPKIDIQIKDAIGRYHQCATIQLDFQLPI 602

Query: 505 RFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSS 563
           RFN  YV+    +K  PV++HRA+ GS+ER I I+ EN+ G  P WLSP Q +V  +  +
Sbjct: 603 RFNLTYVSHDGDDKKRPVIVHRAILGSVERMIAILTENYGGKWPFWLSPRQVMVVPVGPT 662

Query: 564 AVEYAQEIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
             EYAQ++           + D     T+N KIR   + +   I++ G+KE    ++ IR
Sbjct: 663 CDEYAQKVRQQFHDAKFMADIDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKISGTVNIR 722

Query: 623 RFGSTTTQKVSLLDAIPILTK 643
              +    + ++ + I  L +
Sbjct: 723 TRDNKVHGERTISETIERLQQ 743


>gi|262038762|ref|ZP_06012119.1| threonine--tRNA ligase [Leptotrichia goodfellowii F0264]
 gi|261747220|gb|EEY34702.1| threonine--tRNA ligase [Leptotrichia goodfellowii F0264]
          Length = 636

 Score =  607 bits (1566), Expect = e-171,   Method: Composition-based stats.
 Identities = 293/643 (45%), Positives = 429/643 (66%), Gaps = 18/643 (2%)

Query: 9   FPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPEDP 67
            PDG+++      T ++ A++IS SL K+ +   I+G   D S  + + GSI+IIT    
Sbjct: 6   LPDGNVRKIEQPMTVTEFAKTISLSLGKETIGAIIDGVQVDPSHIIEKSGSIKIITSTSE 65

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQ 127
             +A+IRHS AHIMA+AVQ ++P  +V IGP+IE+GF+YDFD E+PF+ ++L +IE++M+
Sbjct: 66  EGVAIIRHSAAHIMAQAVQKLFPGTKVTIGPVIENGFFYDFDPEKPFTEEDLTKIEEEMK 125

Query: 128 EIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPH 187
           +I+  +  F +  +S E A++LF    E YKVEI++ +     V++Y+QGE+ DLCRG H
Sbjct: 126 KIVKENYEFKRSEMSAEDAKKLFAEMGENYKVEIIDDLGVD-KVSIYQQGEFVDLCRGTH 184

Query: 188 VRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHR 247
           + STG +K F KLM  AGAYWRG+S+  ML RIYG A+ +++EL  YL  LEE+E+RDHR
Sbjct: 185 IPSTGYLKAF-KLMSTAGAYWRGNSDNKMLQRIYGVAFGSKKELEDYLTMLEEAERRDHR 243

Query: 248 KLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQ 306
           KL ++MDLF + E G G  F+  KG ++   L    R++ K   YEEI TP +LD+ LW+
Sbjct: 244 KLGKQMDLFFLDEHGPGFPFFMPKGMELMNKLQEIWRKEHKKRKYEEIRTPVMLDKELWE 303

Query: 307 QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFG 366
            SGHW +YR NM+  +       D + +A+KPMNCPG +  + + L SY++LP++  E G
Sbjct: 304 ISGHWFNYRENMYTSEI------DEKVYAIKPMNCPGSIIAYKNNLHSYKDLPLKYGEMG 357

Query: 367 SVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK 426
            V+R+E SG+LHGLMRVR FTQDDAHVFCTKEQ+  + ++I +L    Y  FGF+  + +
Sbjct: 358 LVHRHEFSGALHGLMRVRAFTQDDAHVFCTKEQIEEQIIEIIDLYDKFYTLFGFDYNI-E 416

Query: 427 LSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDA 486
           LST+PEK +GSD +W  AE  +   L+      +  I   +  G+GAFYGPK ++ ++D+
Sbjct: 417 LSTKPEKAIGSDEIWAVAEADLASALE------KKGIKYKLNPGDGAFYGPKIDFKMRDS 470

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNL 546
           IGR WQCGTIQ+DFNLP+RF   Y+ +  EK  PVMIHRA++GS+ERFIGI+IE++ G  
Sbjct: 471 IGRIWQCGTIQLDFNLPARFEMSYIGADGEKHEPVMIHRAMYGSMERFIGILIEHYAGAF 530

Query: 547 PLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH-SIKKIPI 605
           P WL+P+QA + TI+   V +A+++   L+   + ++ D R+E I YKIRE    +KIP+
Sbjct: 531 PTWLAPVQARILTISKEQVPFAEKLYEELQEAGIRVDIDTRDEKIGYKIREANGDQKIPV 590

Query: 606 IIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
            +I G  E     + +RRFGS  +Q VS+ + + +L +ES  P
Sbjct: 591 QLIIGKNEVENNEVNVRRFGSQDSQNVSVKEIVDMLLEESKVP 633


>gi|66806197|ref|XP_636821.1| threonyl-tRNA synthetase [Dictyostelium discoideum AX4]
 gi|74852684|sp|Q54J66|SYTC1_DICDI RecName: Full=Probable threonyl-tRNA synthetase 1, cytoplasmic;
           AltName: Full=Threonine--tRNA ligase; Short=ThrRS
 gi|60465220|gb|EAL63315.1| threonyl-tRNA synthetase [Dictyostelium discoideum AX4]
          Length = 710

 Score =  607 bits (1566), Expect = e-171,   Method: Composition-based stats.
 Identities = 225/648 (34%), Positives = 358/648 (55%), Gaps = 24/648 (3%)

Query: 3   SDIKLTFPDGSIKN-FPVHATGSDVAESISRSLAKKAVAVAINGK-VCDLSDPVR-EGSI 59
             I +T PDG +        T  D+A+ ISR LA   V+  +NG+ + D+S P+  + ++
Sbjct: 74  EPINVTLPDGKVVAGIKNKTTPYDIAKGISRGLADSIVSSKVNGEQIWDISRPLEADCNL 133

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF-DKEQPFSSDE 118
           ++   +         HS AHI+ +A++ I+   Q+ IGP   +GFYYD    ++  S+++
Sbjct: 134 QLCKFDSEEGKKTFWHSSAHILGQAMERIYGG-QLCIGPATSEGFYYDMAMGDKIVSAED 192

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
              I +  Q+I+    PF +  +  + A  +F+  K  YK EI+  IP ++ V+LYR G 
Sbjct: 193 YKLINEVAQKIVQEKQPFERLAVPRDIALTMFKFNK--YKTEIISKIPQEDTVSLYRCGT 250

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLCRGPHV +T  +K F  + K + AYW G +    L R+YG ++  ++++ +Y  F+
Sbjct: 251 LVDLCRGPHVPNTSYIKSF-AVTKNSSAYWLGKAENDDLQRVYGISFPDKKQMEEYENFM 309

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
            E+  RDHR + +  +LF       G  F+   G +I+  L+ ++R +     + E+ +P
Sbjct: 310 REAALRDHRNVGKAQELFFFHPYSPGSAFFLPHGTRIYNKLVEFIREEYHRRGFTEVISP 369

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +  Q LW+QSGHW  Y  NMF +        D   F+LKPMNCPGH  +F    +SYRE
Sbjct: 370 SIFSQKLWEQSGHWQKYSENMFVL------PVDKDNFSLKPMNCPGHCLMFGSRQRSYRE 423

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R A+FG ++RNE +G+L GL RVR F QDDAH+FCT E + +E       +  +Y  
Sbjct: 424 LPLRFADFGVLHRNELAGALTGLTRVRKFQQDDAHIFCTTEMIEDEINSCLGFMQYVYGI 483

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFE  + +LSTRP+  +G  A WD AE  ++  L+      +      +   +GAFYGP
Sbjct: 484 FGFEFGL-ELSTRPDNFLGEIAQWDIAEASLEKALNKFGKPWK------LNPKDGAFYGP 536

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE--KCHPVMIHRAVFGSIERFI 535
           K +  + D + R  QC TIQ+DF LP RF+  Y +  +   K  PV+IHRA+ GS+ER +
Sbjct: 537 KIDIHITDCLKRSHQCATIQLDFQLPIRFDLEYQSDDAAELKKRPVIIHRAILGSVERMM 596

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            I+IE+  G  PLW+SP QAIV T+  +  EY Q++   +       + D  ++TI+ K+
Sbjct: 597 AILIEHTGGKWPLWVSPRQAIVVTVNKTHNEYGQKVCKEISDAGFYCDIDDSDKTISKKV 656

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           RE  + +   I++ G +E +  ++ +R   +     +++ D I    +
Sbjct: 657 REAQLAQYNYILVVGQEEINGNTVNVRTRDNVVRGSLTVNDLISEFKQ 704


>gi|212550461|ref|YP_002308778.1| threonyl-tRNA synthetase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
 gi|229470721|sp|B6YQ95|SYT_AZOPC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|212548699|dbj|BAG83367.1| threonyl-tRNA synthetase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
          Length = 648

 Score =  607 bits (1565), Expect = e-171,   Method: Composition-based stats.
 Identities = 257/650 (39%), Positives = 397/650 (61%), Gaps = 20/650 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEII 62
            IK+TFP+ S +N+ +  T   +AESIS  LA++ ++  +NG++ DLS P+ E  S+++ 
Sbjct: 1   MIKITFPNTSARNYAIGTTPMQIAESISCRLAEEILSANVNGEMWDLSRPINENASVKLY 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ--PFSSDELA 120
             ED        HS AH++AE++Q ++P +   +GP IE+GFYYD D          +L 
Sbjct: 61  KWEDFEGKRTFWHSSAHLLAESLQELYPNIHFGMGPAIENGFYYDVDLGDGVVIKDVDLV 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEKKMQE+ ++     +Q ++ + A ELF  K E YK+E++  +     +T+Y QG + 
Sbjct: 121 TIEKKMQELASKKLSISRQNVTKQNALELFGKKGETYKIELISKL-EDGKITVYTQGNFT 179

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ +T  +K   KL  VA AYW+GD +R  L+RIYG ++  ++EL++YL  +E+
Sbjct: 180 DLCRGPHLPNTSYIK-AIKLTSVARAYWKGDESRKQLTRIYGISFPKKEELSEYLALMEK 238

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           ++KRDHR++ +EM+LF  +     G+  W  KG ++   L  +++R + K  Y+++ TP 
Sbjct: 239 AKKRDHRRIGKEMELFTFSHKVGRGLPLWLPKGTQLRLRLEDFLKRIQKKYGYQQVITPH 298

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           + ++ L+  SGH+  Y  + F       T +    F LKPMNCP H  ++   L+SY+EL
Sbjct: 299 IGNKTLYIASGHYAKYGKDSFQ---PIHTPELGEEFLLKPMNCPHHCEIYKAFLRSYKEL 355

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFG+VYR E SG L GL RVRGFTQDDAH+FC+ EQ+  E +K+ +++  I+   
Sbjct: 356 PLRLAEFGTVYRYERSGELQGLTRVRGFTQDDAHIFCSPEQVKEELIKVIDIVRVIFCAL 415

Query: 419 GFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            F    V++S R      K +GS+  W ++E  +      I+   + +I   + LGE AF
Sbjct: 416 NFNDYEVQISLRDLNNRIKYIGSEENWKNSEGAI------IEVCQEKKIKAKIKLGEAAF 469

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK ++++KDA+GR+WQ GTIQVD+NLP RF   YV + ++K  PVMIHRA FGS+ERF
Sbjct: 470 YGPKLDFMVKDALGRNWQLGTIQVDYNLPERFELEYVGADNQKHRPVMIHRAPFGSMERF 529

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
           + +MIE+  G  PLWL   Q ++  ++ +  +YA+EIA       + +  D RNE +  K
Sbjct: 530 VAVMIEHTGGKFPLWLVSDQVVILPVSENYNQYAEEIAKEFHKRDIRVTIDKRNEKVGRK 589

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IR++ +KKIP ++I G+KE     I +R+ G      + + +    L KE
Sbjct: 590 IRDNELKKIPYLLIIGEKERRNSEISVRKHGKENIGIMKVTEFAEFLKKE 639


>gi|239905697|ref|YP_002952436.1| threonyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
 gi|259516431|sp|C4XL11|SYT_DESMR RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|239795561|dbj|BAH74550.1| threonyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
          Length = 647

 Score =  607 bits (1565), Expect = e-171,   Method: Composition-based stats.
 Identities = 267/648 (41%), Positives = 405/648 (62%), Gaps = 18/648 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS--IEII 62
           +++T  D S++     A G  ++ ++S    K AVA  ++G+  DL+ P+ E +  + ++
Sbjct: 1   MQVTIEDQSLEAAAGEACGQVLSRAVSGKRLKNAVACLVDGQPRDLAFPLPEDAHELALV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
             + P  L++IRHS AHIMAEAV++++P VQV IGP IE+GFYYDF  E+PF+ D+L  I
Sbjct: 61  AADSPMGLSIIRHSAAHIMAEAVKTLFPSVQVTIGPAIENGFYYDFAYERPFTPDDLEAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +MQ+ IA + PF   Y+    A+ LF ++ E+YK+EI++     + V+LYR G + DL
Sbjct: 121 EAEMQKSIAANQPFSCTYVPKADAKALFAAQGESYKLEIMDENIVGDTVSLYRHGTFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +TG + +  KL+ VAGAYWRGD  RPML RIYGTA+ +  +L  YL+ +EE++
Sbjct: 181 CRGPHVPTTG-LVRAVKLLSVAGAYWRGDEKRPMLQRIYGTAFASAADLKTYLHHIEEAK 239

Query: 243 KRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVL 300
           KRDHRKL  ++DLF  +E+   G+  WH KG  I   +  + RR+ ++  Y+ +  P +L
Sbjct: 240 KRDHRKLGAQLDLFSFSEEVGAGMCIWHPKGELIRTIIEDFERREHLRRGYDLVRGPLIL 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            + LW++SGH+D+YR NM+       T  D +++ +KPMNC  H+ ++   ++SYR+LP 
Sbjct: 300 RRELWERSGHYDNYRENMYF------TEIDEQSYGIKPMNCLSHMLIYKSRVRSYRDLPQ 353

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R  E G V+R+E SG LHGL+RVR FTQDDAH+ C  +Q+  E   +   +  +   FGF
Sbjct: 354 RYFELGVVHRHEKSGVLHGLLRVRQFTQDDAHILCRPDQLQEEITGVVRFVQDVVGLFGF 413

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
                +LSTRPEK +GSD  WD A   +   +++I       +   V  G+GAFYGPK +
Sbjct: 414 -DFEAELSTRPEKSIGSDEDWDRATKALVDAMESIG------LPYEVNEGDGAFYGPKID 466

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
             LKDA+ R WQC TIQ DF LP RF+  Y ++  E+  PVM+HR + G++ERF+G++IE
Sbjct: 467 IKLKDALDRRWQCATIQCDFTLPERFDLVYTDADGERKRPVMLHRVILGAVERFLGVLIE 526

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +  G LP WLSP+QA +  +T +  E+A++    LK   + +E D RNE + +K+RE  +
Sbjct: 527 HTAGALPTWLSPVQARILIVTDAQKEFAEQALARLKEAGIRVELDDRNEKLGFKVREAQV 586

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
           +KIP +++ GDKE     + +R          +L +   ++T +   P
Sbjct: 587 EKIPYMLVAGDKEKELGGLNVRLRSGENLGVKTLDEVALMITADCQEP 634


>gi|332821648|ref|XP_003310808.1| PREDICTED: threonyl-tRNA synthetase, cytoplasmic [Pan troglodytes]
          Length = 756

 Score =  607 bits (1565), Expect = e-171,   Method: Composition-based stats.
 Identities = 242/681 (35%), Positives = 359/681 (52%), Gaps = 56/681 (8%)

Query: 2   PSDIKLTFPDGSIKNFP-VHATGSDVAESIS----------------------------- 31
              IK+T PDG   +      T   +A  IS                             
Sbjct: 80  SKPIKVTLPDGKQVDAESWKTTPYQIACGISHTASCINLSSLASLLASVAIPSSGMPWPP 139

Query: 32  ----RSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQ 86
               + LA   V   +N  V DL  P+  + S+E++  ED  + AV  HS AHIM EA++
Sbjct: 140 LFFLQGLADNTVIAKVNNLVWDLDRPLEEDCSLELLKFEDEEAQAVYWHSSAHIMGEAME 199

Query: 87  SIWPEVQVAIGPIIEDGFYYDFDKEQP-FSSDELAQIEKKMQEIIARDSPFLKQYLSHEK 145
            ++    +  GP IE+GFYYD   E+   SS++ + +E   ++II     F +  +  E 
Sbjct: 200 RVYGGC-LCYGPPIENGFYYDMYLEEGGVSSNDFSSLEALCKKIIKEKQAFERLEVKKET 258

Query: 146 ARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAG 205
              +F+     +K  IL         T+YR G   DLCRGPHVR TG++K   K+ K + 
Sbjct: 259 LLAMFKY--NKFKCRILNEKVNTPTTTVYRCGPLIDLCRGPHVRHTGKIK-ALKIHKNSS 315

Query: 206 AYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGV 265
            YW G ++   L RIYG ++   + L ++  F EE++ RDHRK+ R+ +L+   E   G 
Sbjct: 316 TYWEGKADMETLQRIYGISFPDPKMLKEWEKFQEEAKNRDHRKIGRDQELYFFHELSPGS 375

Query: 266 IFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCA 324
            F+  KG  I+  LI ++R + +   ++E+ TP + +  LW  SGHW  Y  NMF+ +  
Sbjct: 376 CFFLPKGAYIYNALIEFIRSEYRKRGFQEVVTPNIFNSRLWMTSGHWQHYSENMFSFEV- 434

Query: 325 DDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVR 384
                +   FALKPMNCPGH  +F+H  +S+RELP+RLA+FG ++RNE SG+L GL RVR
Sbjct: 435 -----EKELFALKPMNCPGHCLMFDHRPRSWRELPLRLADFGVLHRNELSGALTGLTRVR 489

Query: 385 GFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
            F QDDAH+FC  EQ+ +E     + + ++Y  FGF   +  LSTRPEK +G   +WD A
Sbjct: 490 RFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSVFGFSFKLN-LSTRPEKFLGDIEVWDQA 548

Query: 445 ENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPS 504
           E  ++  L+      +      +  G+GAFYGPK +  +KDAIGR  QC TIQ+DF LP 
Sbjct: 549 EKQLENSLNEFGEKWE------LNSGDGAFYGPKIDIQIKDAIGRYHQCATIQLDFQLPI 602

Query: 505 RFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSS 563
           RFN  YV+    +K  PV++HRA+ GS+ER I I+ EN+ G  P WLSP Q +V  +  +
Sbjct: 603 RFNLTYVSHDGDDKKRPVIVHRAILGSVERMIAILTENYGGKWPFWLSPRQVMVVPVGPT 662

Query: 564 AVEYAQEIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
             EYAQ++           + D     T+N KIR   + +   I++ G+KE    ++ IR
Sbjct: 663 CDEYAQKVRQQFHDAKFMADIDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKISGTVNIR 722

Query: 623 RFGSTTTQKVSLLDAIPILTK 643
              +    + ++ + I  L +
Sbjct: 723 TRDNKVHGERTISETIERLQQ 743


>gi|296114661|ref|ZP_06833313.1| threonyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769]
 gi|295978757|gb|EFG85483.1| threonyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769]
          Length = 603

 Score =  607 bits (1565), Expect = e-171,   Method: Composition-based stats.
 Identities = 293/601 (48%), Positives = 407/601 (67%), Gaps = 14/601 (2%)

Query: 44  NGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIED 102
           +G + D S  +  +   E +   D  +L++IRH  AH++A+AV  ++P   +A GP  E 
Sbjct: 2   DGALFDHSTLLSGDRPSEPVFRSDADALSLIRHDTAHVLAQAVSELFPGTALATGPATEQ 61

Query: 103 GFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL 162
           GF+YDF  E+ F+ D+L +IE +M EI+ RD P +++    E A    +   + YK EI+
Sbjct: 62  GFFYDFAAERAFTDDDLVRIEARMHEIVDRDEPIIREEWKRESALAWCQENGQPYKAEII 121

Query: 163 ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYG 222
            S+P    ++ YRQG + DLCRGPH+ STGQ+   F+L+  AGAYW+GD N PML RI+G
Sbjct: 122 RSLPLDAVLSFYRQGNFVDLCRGPHLGSTGQIGHEFRLLGTAGAYWKGDRNNPMLQRIHG 181

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISY 282
           TA     EL  +    EE+ +RDHR+L REMDLFH   +  G +FWH  GW +FQTL++Y
Sbjct: 182 TACRDANELAAWERRQEEAARRDHRRLGREMDLFHFQPEAPGAVFWHPNGWTLFQTLLAY 241

Query: 283 MR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           +R R+  ++Y EINTP ++D  LWQ SGHW+ +  NMF       T  + RT+ALKPMNC
Sbjct: 242 LRARQQAENYVEINTPDIMDLSLWQASGHWEKFGENMFT------TETEGRTYALKPMNC 295

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
           PG V VF HGLKSYR+LP+R+AEFG V+R EPSG+LHGLMRVR FTQDDAH+FCT EQM 
Sbjct: 296 PGGVQVFRHGLKSYRDLPLRMAEFGKVHRFEPSGALHGLMRVRAFTQDDAHIFCTPEQME 355

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E  +I +L++SIYKDFGF+ + +K S RPEKRVGSD +WD +E  ++  ++        
Sbjct: 356 AETQRICHLVLSIYKDFGFDDVRIKFSDRPEKRVGSDEIWDRSEEALRRGVEASG----- 410

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
            ++     GEGAFYGPK E++L+DAIGRDWQCGT+QVD NLP R +A Y+ +  +K  PV
Sbjct: 411 -LSYTRNPGEGAFYGPKLEFVLRDAIGRDWQCGTVQVDLNLPQRLDAHYIGADGDKHPPV 469

Query: 522 MIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLS 581
           M+HRA+FGS+ERFIGI++E+  G+LP WL+P+Q +V TIT++A  YA ++   L+   + 
Sbjct: 470 MLHRALFGSLERFIGILLEHHAGHLPFWLAPVQVVVATITAAADNYADDLIKALRQRGVR 529

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           +  D RNE I YK+REHS+ K+P+++I G KEA   ++ IR +GS  T  ++   AI +L
Sbjct: 530 VVPDLRNEKIAYKVREHSLAKVPVLLIVGKKEAEAGTVSIREYGSPDTPTIATETAIDLL 589

Query: 642 T 642
            
Sbjct: 590 A 590


>gi|1565235|emb|CAB02510.1| Threonyl tRNA Synthetase [Bacillus subtilis subsp. subtilis str.
           168]
          Length = 601

 Score =  606 bits (1563), Expect = e-171,   Method: Composition-based stats.
 Identities = 263/609 (43%), Positives = 398/609 (65%), Gaps = 16/609 (2%)

Query: 38  AVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAI 96
           A A  +NGK+ DLS  +  +  + I+T +    L V+RH+ AH++A+AV+ ++ EV + +
Sbjct: 1   AAAGQVNGKLVDLSFKLEEDAELSIVTLDSQEGLQVLRHTTAHVLAQAVKRLYGEVSLGV 60

Query: 97  GPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEA 156
           GP+I DGFYYD    +  +S +L  IEK+M+ II  +    +  +S+E+A ELF  K E 
Sbjct: 61  GPVILDGFYYDMKLGKSLASGDLEAIEKEMKNIINENLEIKRIEVSYEEAEELFAQKDER 120

Query: 157 YKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPM 216
            K+EIL+ IP  E++TLY+QGE+ DLCRGPH+ STG +K F KL +V+GAYWRGDS   +
Sbjct: 121 LKLEILKDIPRGEDITLYQQGEFVDLCRGPHLPSTGMIKAF-KLTRVSGAYWRGDSKNEV 179

Query: 217 LSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIF 276
           L R+YG A+  +++L  +L+ LEE+ KRDHRKL +++ LF  +E+  G+ F+  KG  + 
Sbjct: 180 LQRVYGVAFQKKKDLDAHLHMLEEAAKRDHRKLGKQLGLFMFSEEAPGMPFYLPKGQIVR 239

Query: 277 QTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFA 335
             L  + R  +    Y+E+ TP +++Q LW+QSGHWD YR NM+  +       D   FA
Sbjct: 240 NELERFSRELQTNAGYDEVRTPFMMNQRLWEQSGHWDHYRDNMYFSEV------DDTRFA 293

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC 395
           +KPMNCPGH+ +F + L SYR+LP+R+AEFG V+R+E SG+L+G++RVR F QDDAH+F 
Sbjct: 294 MKPMNCPGHMLIFKNSLYSYRDLPIRMAEFGQVHRHEYSGALNGMLRVRTFCQDDAHIFV 353

Query: 396 TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTI 455
            ++Q+ +E  +   LI  +Y+ FGFE   V+LSTRPE  +G D+LW+ +E  +  VL+ +
Sbjct: 354 REDQIESEIKEAIRLIDEVYRTFGFEYS-VELSTRPEDSLGDDSLWEASERALARVLEEL 412

Query: 456 KNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS 515
                  ++  +  G+GAFYGPK ++ +KDA+ R  QC TIQ+DF +P +F+  Y+N  +
Sbjct: 413 G------LSYEINEGDGAFYGPKIDFHIKDALKRSHQCATIQLDFQMPEKFDLTYINELN 466

Query: 516 EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLL 575
           EK  PV+IHRAVFGSI+RF GI+IE++ G  P+WL+PIQ  +  ++   ++Y +++   L
Sbjct: 467 EKVRPVVIHRAVFGSIDRFFGILIEHYGGAFPVWLAPIQVQIIPVSHVHLDYCRKVQAEL 526

Query: 576 KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
           K   +    D RNE + YKIRE  ++KIP +++ GD E  E ++ +RRFG    + V   
Sbjct: 527 KQAGIRAGIDERNEKLGYKIRESQVQKIPYVLVLGDHEEQENAVNVRRFGHQQNEHVPFQ 586

Query: 636 DAIPILTKE 644
                L K+
Sbjct: 587 TFKDKLVKQ 595


>gi|320580027|gb|EFW94250.1| Threonyl-tRNA synthetase [Pichia angusta DL-1]
          Length = 714

 Score =  606 bits (1562), Expect = e-171,   Method: Composition-based stats.
 Identities = 248/651 (38%), Positives = 363/651 (55%), Gaps = 30/651 (4%)

Query: 4   DIKLTFPDGSIKN-FPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
            IK+T  DG++K       T  D+A+ I +S  ++ V   +NG++ DL  P   +  +E 
Sbjct: 68  PIKVTLKDGTVKEATSWETTPFDIAKEIGKSFCERQVISKVNGELWDLERPFEADSKLEF 127

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF---DKEQPFSSDE 118
              + P    V  HS AHI+ E  ++ +    +  GP  EDGF+YD    + +   S ++
Sbjct: 128 FDFDSPEGKQVFWHSSAHILGEGCENHY-GAHLCFGPPTEDGFFYDMAIDEGDYKVSQND 186

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES-IPAKENVTLYRQG 177
            + IE      I    PF +  ++ ++  E+       YKV +++S IP   + T+YR G
Sbjct: 187 FSDIETLCSRAIKEKQPFERLVMTKDELLEM--FSYNKYKVALIKSKIPDGTSSTVYRCG 244

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
              DLCRGPHV  TG+VK F K++K + +Y+ GDSN   L R+YG ++  +  + ++L F
Sbjct: 245 PLIDLCRGPHVPHTGRVKAF-KVLKNSSSYFLGDSNNDSLQRVYGVSFPDKALMKEHLKF 303

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINT 296
           LEE+  RDHRK+ RE DLF   E   G  FW   G +I+  L   +R + +   YEE+ T
Sbjct: 304 LEEAAARDHRKIGREQDLFFFHEMSPGSCFWLPHGARIYNGLCELLRTQYRKRGYEEVIT 363

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P + +  LW+ SGHW +Y+ NMF  +   DT      F LKPMNCPGH  +F    +SYR
Sbjct: 364 PNMYNSKLWETSGHWANYKENMFTFEVEKDT------FGLKPMNCPGHCLMFKSRERSYR 417

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ELP R+A+FG ++RNE SG+L GL RVR F QDDAH+FCT++Q+ +E   + + +  IY 
Sbjct: 418 ELPWRVADFGVIHRNEFSGALSGLTRVRRFQQDDAHIFCTQDQIEDEISGVFDFLQHIYG 477

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
            FGFE  M +LSTRPEK VG    W++AE  ++  L+      +      +  G+GAFYG
Sbjct: 478 IFGFEFKM-ELSTRPEKYVGDIETWNNAEAKLESALN------KWGGKWELNPGDGAFYG 530

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS--EKCHPVMIHRAVFGSIERF 534
           PK + ++ DA+ R  QC TIQ+DF LP+RF   +       E   PVMIHRA+ GSIER 
Sbjct: 531 PKIDIMISDALKRWHQCATIQLDFQLPNRFELEFRGKDDSAEVQRPVMIHRAILGSIERM 590

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             I+ E+F G  P WLSP Q +V  +     +YAQE+  LL++     + D    T+  K
Sbjct: 591 TAILTEHFAGKWPFWLSPRQILVVPVGVRYFDYAQEVQKLLQTEGFYADVDLSGNTLQKK 650

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK----VSLLDAIPIL 641
           +R   ++K   I I G++E +E+++ IR       Q     V L D +P L
Sbjct: 651 VRTGQLQKYNFIFIVGEQEQNEKAVNIRNRDIQELQSKNDMVKLNDVLPKL 701


>gi|332030887|gb|EGI70523.1| Threonyl-tRNA synthetase, cytoplasmic [Acromyrmex echinatior]
          Length = 714

 Score =  606 bits (1562), Expect = e-171,   Method: Composition-based stats.
 Identities = 231/644 (35%), Positives = 363/644 (56%), Gaps = 22/644 (3%)

Query: 4   DIKLTFPD-GSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           +I +T PD  +I       T  DVA+SIS+ LA   V   +N ++ DL  P+  +  +++
Sbjct: 75  NITVTLPDEKNISAQSWRTTPYDVAKSISQGLADNTVIAKVNNELWDLDRPLEFDCKLQL 134

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELA 120
           +  +D     V  HS AH++ EA++ ++    +  GP IE+GFYYD    ++  S+ +  
Sbjct: 135 LKFDDVEGQQVFWHSSAHVLGEAMERVYGGC-LCYGPPIENGFYYDMYLGDKGISNTDFP 193

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            +E   + I+    PF +  ++ E   E+F+     +KV I+         T YR G   
Sbjct: 194 YLEGLYKNIVKEKQPFERLEMTKEDLLEMFKY--NEFKVRIINERIQTPTTTAYRCGPLI 251

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHVR TG++K   K+ K +  YW G+ N   L R+YG ++   ++L ++  F EE
Sbjct: 252 DLCRGPHVRHTGKIK-AMKITKNSSTYWEGNVNAESLQRLYGISFPDTKQLKEWEKFQEE 310

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQV 299
           + KRDHRK+ +E +L+   E   G  F+  +G  I+ TL+ ++R + +   ++E+ TP +
Sbjct: 311 AAKRDHRKIGKEQELYFFHELSPGSCFFQPRGAYIYNTLVDFIRSEYRKRGFQEVVTPNI 370

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +  LWQ SGHW  Y  NMF+         +  TFALKPMNCPGH  +F+   +S+RELP
Sbjct: 371 FNSKLWQTSGHWQHYAENMFSFDV------EKETFALKPMNCPGHCMIFDVRCRSWRELP 424

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R A+FG ++RNE SG+L GL+RVR F QDDAH+FC+ +Q+ +E     + +  +Y   G
Sbjct: 425 IRFADFGVLHRNELSGALTGLIRVRRFQQDDAHIFCSIDQIKDEINGALDFLWHVYSILG 484

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F   +  LSTRPEK +G   +W++AE  ++  L+             +   +GAFYGPK 
Sbjct: 485 FTFSLC-LSTRPEKFLGDIKVWNEAEKALEESLNAFGQPW------SLNPEDGAFYGPKI 537

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +  + DA+ R  Q  TIQ+DF LP RFN  YVN   EK  P++IHRA+ GS+ER I I+ 
Sbjct: 538 DVTILDALKRPHQTATIQLDFQLPIRFNLSYVNEAGEKTRPIIIHRAILGSVERMIAILT 597

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIREH 598
           E++ G  P W+SP QA+V  + S   +YA E+   L    + +E D   ++T+N KIR  
Sbjct: 598 ESYGGKWPYWISPRQAMVVPVASQFDDYAFEVKQKLWDAGVMVEIDIDPSDTLNKKIRNA 657

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            + +   I++ G+KE +  ++ IR   +    ++++ + I  L 
Sbjct: 658 QLAQFNFILVVGEKERNAGTVNIRTRDNVVHGEMAVDELITKLK 701


>gi|18311304|ref|NP_563238.1| threonyl-tRNA synthetase [Clostridium perfringens str. 13]
 gi|110801319|ref|YP_697012.1| threonyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
 gi|168205151|ref|ZP_02631156.1| threonyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
 gi|168210374|ref|ZP_02635999.1| threonyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626]
 gi|168213233|ref|ZP_02638858.1| threonyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
 gi|168216713|ref|ZP_02642338.1| threonyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
 gi|182625789|ref|ZP_02953556.1| threonyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
 gi|22654117|sp|Q8XI02|SYT_CLOPE RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|123148532|sp|Q0TMX8|SYT_CLOP1 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|18145987|dbj|BAB82028.1| threonine-tRNA ligase [Clostridium perfringens str. 13]
 gi|110675966|gb|ABG84953.1| threonyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
 gi|170663286|gb|EDT15969.1| threonyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
 gi|170711530|gb|EDT23712.1| threonyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626]
 gi|170715283|gb|EDT27465.1| threonyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
 gi|177908945|gb|EDT71432.1| threonyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
 gi|182381219|gb|EDT78698.1| threonyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
          Length = 643

 Score =  606 bits (1561), Expect = e-171,   Method: Composition-based stats.
 Identities = 238/649 (36%), Positives = 370/649 (57%), Gaps = 20/649 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+T  DGSIK      +  ++A+SIS+ LA+ A    +NGKV DL   V  + S+EI 
Sbjct: 1   MIKITLKDGSIKEVEAGLSIFEIAQSISQGLARNACCGILNGKVEDLRFIVNEDSSLEIC 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +         H+ +H++A AV+ ++P+ ++AIGP I++GFYYDFD E+PFS+D+L ++
Sbjct: 61  TFDSKEGQHAFNHTASHVLAAAVKRLFPQDKLAIGPSIDNGFYYDFDTEKPFSADQLNKL 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E++M++II  +    +  L   +A EL +   E YKVE++  +P  E ++ Y+ G++ DL
Sbjct: 121 EEEMKKIIKENPEIKRFELPRNEALELMK--DEPYKVELINDLPEGEVISFYQIGDFVDL 178

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPH+ +   +K   KL++  GAYW+GD    MLSR+YGTA+  + EL  YL  LEE++
Sbjct: 179 CAGPHLMAVKPIK-AVKLLRSTGAYWKGDEKNKMLSRVYGTAFPKKSELDAYLEALEEAK 237

Query: 243 KRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVL 300
           KRDH KL RE+ +F   E+   G+     KG +I QTL  ++   + +  Y    TP + 
Sbjct: 238 KRDHNKLGRELGIFTTDENVGQGLPLLMPKGARIIQTLQRWIEDEEQRRGYVLTKTPLMA 297

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
              L++ SGHWD Y+  MF +    D  KD   FAL+PM CP   A++N    SYR+LPV
Sbjct: 298 KSDLYKISGHWDHYKDGMFVL---GDEEKDSEVFALRPMTCPFQYAIYNSTQHSYRDLPV 354

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R AE  +++RNE SG +HGL+RVR FT  D H+ CT EQ+ +E     +L+  + +  G 
Sbjct: 355 RFAETSTLFRNESSGEMHGLIRVRQFTLADGHIVCTPEQLEDEFKNTVDLVKYVMETLGI 414

Query: 421 EKIMVKL-----STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
              +            EK +     W++ +NIM+ +L+ +       I+      E AFY
Sbjct: 415 ADDITYRFSKWDPNNTEKYINDPEAWENTQNIMREILNHLN------IDFTEADDEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +   K+  G++    TIQ+DF L  RF  +Y++   EK  P +IHR+  G  ER +
Sbjct: 469 GPKLDIQFKNVHGKEDTIITIQIDFALAERFGMYYIDKDGEKKRPYIIHRSSIGCYERTL 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE + G LP W++P+QA V  ++    +YA E+   L+   + +E D R E I YKI
Sbjct: 529 AMLIEKYAGALPTWIAPVQAKVLPLSDKYADYANEVVEELRRRGVRVEADHRAEKIGYKI 588

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           RE  +++ P I++ G+KEA  + + +R   +     + L D +  +  E
Sbjct: 589 REARLERTPYILVVGEKEAENKEVSVRSRKNGEEGAMPLADFVNRIVLE 637


>gi|15807075|ref|NP_295804.1| threonyl-tRNA synthetase [Deinococcus radiodurans R1]
 gi|22654147|sp|Q9RSP3|SYT_DEIRA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|6459875|gb|AAF11630.1|AE002044_3 threonyl-tRNA synthetase [Deinococcus radiodurans R1]
          Length = 649

 Score =  606 bits (1561), Expect = e-171,   Method: Composition-based stats.
 Identities = 250/656 (38%), Positives = 387/656 (58%), Gaps = 30/656 (4%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           + +T PDG   +    AT  D A++I   LA+ A+    NG++ DL  P+ +G SI +IT
Sbjct: 1   MHVTLPDGKQLDLQPGATALDAAKAIGPRLAQDALGATANGELTDLMTPLSDGASITLIT 60

Query: 64  PEDP-RSLAVIRHSCAHIMAEAVQSIW-------PEVQVAIGPIIEDGFYYDFDKEQPFS 115
            ++P  +  + RHS  H+M++AV   +         ++  +GP IE+G+Y DFD  +P  
Sbjct: 61  KKNPGDAAPLFRHSLGHVMSQAVGEYYKAKGYGPDAIKRGVGPYIENGWYQDFDLPEPLK 120

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            ++L +IEK M++II R     ++ +S ++A    +   + YK E++E +P  E +T Y 
Sbjct: 121 EEDLPEIEKIMRDIIGRGLDITRREISKDEALA--QFPHDPYKAELIEGLPDDEPITFYS 178

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
           QG++ DLCRGPH  STG++ + FKLM  +GAYWRG+   P+L RIYG A+ TQ+EL +YL
Sbjct: 179 QGDYTDLCRGPHFPSTGKLPQSFKLMSTSGAYWRGNEKNPILQRIYGVAFATQKELDEYL 238

Query: 236 YFLEESEKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEE 293
           + LEE+++RDHRKL +E++LF I    G G+  W   G  + + L ++M+ +  +  Y+ 
Sbjct: 239 FQLEEAKRRDHRKLGKELELFTIDPLVGKGLPLWLPNGTVLREELTNFMKEQQFQRGYQG 298

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           + TP + +  L++ SGH+  Y  + F     D+       + LKPMNCP HV ++    +
Sbjct: 299 VVTPNIGNLDLYRTSGHYPYYSESQFNPIQVDE-----EEYMLKPMNCPHHVRIYASKPR 353

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYR+LPVRLAEFG+VYR E SG L+GL RVRGFTQDDAH+FC  +Q+  E L + +L + 
Sbjct: 354 SYRDLPVRLAEFGTVYRYEQSGELNGLTRVRGFTQDDAHIFCRPDQLKREFLDVLDLTVL 413

Query: 414 IYKDFGFEKIMVKLSTRPEK---RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
           + K FG   +  ++  R  +    VG +  W  AE  +   ++ +       +   +  G
Sbjct: 414 VLKTFGMTDVRFRVGVRDPESDKYVGDEQNWALAERQIIEAVEEVG------LPYTIEPG 467

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           + AFYGPK ++++KD +GR+WQ GTIQVD+NLP RF+  Y     ++  P+MIHRA FGS
Sbjct: 468 DAAFYGPKLDFVVKDVLGREWQLGTIQVDYNLPERFDISYTGEDGQEHRPIMIHRAPFGS 527

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
           IERF GI+IE++ G+ PLWL+P Q ++  I      YA+E+   L    L  E D  +  
Sbjct: 528 IERFTGILIEHYAGDFPLWLAPRQVMIIPIADRHNAYAEELREELHRAGLRAEVDDSSNR 587

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRF---GSTTTQKVSLLDAIPILTK 643
           +  K+R+  + KIP+++I GDKE   R + +R     G+   + V   +    L +
Sbjct: 588 MQAKVRDAELHKIPVMLIVGDKEQEAREVSVRERTGEGTKERKGVKFDELKAELLE 643


>gi|71021529|ref|XP_760995.1| hypothetical protein UM04848.1 [Ustilago maydis 521]
 gi|46100879|gb|EAK86112.1| hypothetical protein UM04848.1 [Ustilago maydis 521]
          Length = 759

 Score =  606 bits (1561), Expect = e-171,   Method: Composition-based stats.
 Identities = 230/660 (34%), Positives = 353/660 (53%), Gaps = 34/660 (5%)

Query: 1   MPSD-IKLTFPDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EG 57
           MP   I +T PDGS +       +  D+A+ IS+SL+++ V   ++  + DL  P+  + 
Sbjct: 103 MPRQPITVTMPDGSTRQGICYETSPMDIAKQISKSLSERIVISKVDDNLWDLERPLEADC 162

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF----DKEQP 113
            +E+   + P    V  HS AH++ EA +  +    + IGP  E+GF+Y+       E+ 
Sbjct: 163 KLELFDFDSPEGKRVFWHSSAHVLGEACEKHY-GCHLCIGPPTEEGFFYEMAMGDSGERM 221

Query: 114 FSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES-IPAKENVT 172
            S  +   +E  ++        F +  +S E+  E+       YK  I++S IP   + T
Sbjct: 222 ISQSDFGALETLIKNATKEKQKFERLVVSKEQLLEM--FNYNKYKQHIIQSKIPDGTSTT 279

Query: 173 LYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELT 232
           +YR G   DLC GPH+  TG++K    ++K + +Y+ GD N   L R+YG ++   ++++
Sbjct: 280 VYRCGPMIDLCVGPHIPHTGRIK-AMTVLKNSASYFLGDQNNDSLQRLYGISFPDAKQMS 338

Query: 233 QYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDY 291
           +Y  FL E+ KRDHRK+ +E +LF   E   G  FW   G +I+ TL  +++ +  +  +
Sbjct: 339 EYKQFLLEAAKRDHRKIGKEQELFMFHELSPGSCFWLPHGARIYNTLQEFLKSEYRQRGF 398

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           +E+ TP + +  LWQ SGHW +Y+ +MF +        D   FALKPMNCPGH  +F   
Sbjct: 399 DEVVTPNMYNSKLWQTSGHWQNYKDDMFVL------GVDKEQFALKPMNCPGHCLMFASR 452

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI 411
            +SY+ELP+RLA+FG ++RNE SG+L GL RVR F QDDAH+FC   Q+  E     + +
Sbjct: 453 DRSYKELPLRLADFGVIHRNEASGALSGLTRVRRFCQDDAHIFCMSSQIEQEMAGCFDFL 512

Query: 412 ISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
             +Y  FGFE  + +LSTRPEK +G    W+ AE  +   LD             +  G+
Sbjct: 513 ERVYGLFGFEFKL-ELSTRPEKFLGDIETWNAAEARLGAALDKFVPG-----KWELNPGD 566

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFY-----VNSHSEKCHPVMIHRA 526
           GAFYGPK +  + DA+ R +QC TIQ+DF LP +F   Y         ++   PVMIHRA
Sbjct: 567 GAFYGPKIDITISDAMRRHFQCATIQLDFQLPQQFKLEYRTAVSQGGETQAERPVMIHRA 626

Query: 527 VFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF 586
           V GS+ERFI I+ E+F G  P WLSP Q +V  +T++  +YA+ +   L       + D 
Sbjct: 627 VVGSLERFIAILTEHFAGKWPFWLSPRQLLVVPVTNTVFDYAKSVQQRLWDQGFFADVDL 686

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS----TTTQKVSLLDAIPILT 642
            + T+  KIR   I +   + + G +E    S+ IR           + + L   I +L 
Sbjct: 687 SDNTLPKKIRNGEIAQYNFVFVVGHEEMQTNSVNIRNRDDVNQKGKAETMDLDKTITLLK 746


>gi|126277226|ref|XP_001373323.1| PREDICTED: hypothetical protein [Monodelphis domestica]
          Length = 806

 Score =  606 bits (1561), Expect = e-171,   Method: Composition-based stats.
 Identities = 238/648 (36%), Positives = 353/648 (54%), Gaps = 23/648 (3%)

Query: 2   PSDIKLTFPDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
              IK+   DG I        T   VA  IS+ LA   V   +N ++ DL  P+ E S +
Sbjct: 163 SKLIKIMLIDGKIVEGESWKTTPYQVAAGISQGLADNTVIAKVNDELWDLDRPLEEDSTL 222

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDE 118
           E++  ++  + AV  HS AHI+ EA++S +    +  GP IE+GFY+D   E +  SS E
Sbjct: 223 ELLRFDNEEAQAVYWHSSAHILGEAMESYYGGC-LCYGPPIENGFYFDMFIEDRGVSSTE 281

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
              +E   + I+     F +  +  E   E+F+     +K  IL         T+YR G 
Sbjct: 282 FPTLENMCKTIMKEKQRFERLEIKKEILLEMFKY--NKFKCRILNEKVDTPTTTVYRCGP 339

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLCRGPHVR TG++K   K+ K +  YW G ++   L RIYG ++   + +  +  F 
Sbjct: 340 LIDLCRGPHVRHTGKIK-AIKIFKNSSTYWEGKADMETLQRIYGISFPDNKMMKTWEKFQ 398

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE++ RDHRK+ +E +LF   +   G  F+  +G  I+ TL+ +++ +    ++ E+ +P
Sbjct: 399 EEAKNRDHRKIGKEQELFFFHDLSPGSCFFLPRGAFIYNTLMDFIKEEYHRRNFTEVISP 458

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            V +  LW+ SGHW  Y  NMF+         +  TFALKPMNCPGH  +F H  +S+RE
Sbjct: 459 NVYNSKLWETSGHWQHYSENMFSF------DIEKETFALKPMNCPGHCLMFAHRPRSWRE 512

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           +P+RLA+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+  E       + S+Y  
Sbjct: 513 MPIRLADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCRMEQIEEEMKGCLEFLQSVYTV 572

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF   +  LSTRPE  +G   +W+ AE  ++  L       +      +  G+GAFYGP
Sbjct: 573 FGFSFQLN-LSTRPENFLGEIEIWNQAEEQLQNSLKEFGKPWK------LNPGDGAFYGP 625

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC-HPVMIHRAVFGSIERFIG 536
           K +  +KDAIGR  QC TIQ+DF LP RFN  YV+  S+    PV+IHRA+ GS+ER I 
Sbjct: 626 KIDIKIKDAIGRYHQCATIQLDFQLPIRFNLTYVSKDSDDKTRPVIIHRAILGSVERMIA 685

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FRNETINYKI 595
           I+ EN+ G  P WLSP Q +V  +  +  EYA +I+          + D  ++ T+N KI
Sbjct: 686 ILSENYGGKWPFWLSPCQVMVIPVGPTCEEYALQISKEFFEAGFMADVDLDQSCTLNKKI 745

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           R   + +   I++ G+KE    ++ +R   +    + S++  I  L K
Sbjct: 746 RNAQLAQYNFILVVGEKEKLNNAVNVRTRDNKIHGEASVVSTISKLKK 793


>gi|169347105|ref|ZP_02866047.1| threonyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
 gi|169296788|gb|EDS78917.1| threonyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
          Length = 643

 Score =  605 bits (1560), Expect = e-171,   Method: Composition-based stats.
 Identities = 238/649 (36%), Positives = 369/649 (56%), Gaps = 20/649 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+T  DGSIK      +  ++A+SIS+ LA+ A    +NGKV DL   V  + S+EI 
Sbjct: 1   MIKITLKDGSIKEVEAGLSIFEIAQSISQGLARNACCGILNGKVEDLRFIVNEDSSLEIC 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +         H+ +H++A AV+ ++P+ ++AIGP I++GFYYDFD E+PFS+D+L ++
Sbjct: 61  TFDSKEGQHAFNHTASHVLAAAVKRLFPQDKLAIGPSIDNGFYYDFDTEKPFSADQLNKL 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E++M++II  +    +  L   +A EL     E YKVE++  +P  E ++ Y+ G++ DL
Sbjct: 121 EEEMKKIIKENPEIKRFELPRNEALELMR--DEPYKVELINDLPEGEVISFYQIGDFVDL 178

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPH+ +   +K   KL++  GAYW+GD    MLSR+YGTA+  + EL  YL  LEE++
Sbjct: 179 CAGPHLMAVKPIK-AVKLLRSTGAYWKGDEKNKMLSRVYGTAFPKKSELDAYLEALEEAK 237

Query: 243 KRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVL 300
           KRDH KL RE+ +F   E+   G+     KG +I QTL  ++   + +  Y    TP + 
Sbjct: 238 KRDHNKLGRELGIFTTDENVGQGLPLLMPKGARIIQTLQRWIEDEEQRRGYVLTKTPLMA 297

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
              L++ SGHWD Y+  MF +    D  KD   FAL+PM CP   A++N    SYR+LPV
Sbjct: 298 KSDLYKISGHWDHYKDGMFVL---GDEEKDSEVFALRPMTCPFQYAIYNSTQHSYRDLPV 354

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R AE  +++RNE SG +HGL+RVR FT  D H+ CT EQ+ +E     +L+  + +  G 
Sbjct: 355 RFAETSTLFRNESSGEMHGLIRVRQFTLADGHIVCTPEQLEDEFKNTVDLVKYVMETLGI 414

Query: 421 EKIMVKL-----STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
              +            EK +     W++ +NIM+ +L+ +       I+      E AFY
Sbjct: 415 ADDITYRFSKWDPNNTEKYINDPEAWENTQNIMREILNHLN------IDFTEADDEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +   K+  G++    TIQ+DF L  RF  +Y++   EK  P +IHR+  G  ER +
Sbjct: 469 GPKLDIQFKNVHGKEDTIITIQIDFALAERFGMYYIDKDGEKKRPYIIHRSSIGCYERTL 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE + G LP W++P+QA V  ++    +YA E+   L+   + +E D R E I YKI
Sbjct: 529 AMLIEKYAGALPTWIAPVQAKVLPLSDKYADYANEVVEELRRRGVRVEADHRAEKIGYKI 588

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           RE  +++ P I++ G+KEA  + + +R   +     + L D +  +  E
Sbjct: 589 REARLERTPYILVVGEKEAENKEVSVRSRKNGEEGAMPLADFVNRIVLE 637


>gi|299135910|ref|ZP_07029094.1| threonyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8]
 gi|298602034|gb|EFI58188.1| threonyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8]
          Length = 680

 Score =  605 bits (1560), Expect = e-171,   Method: Composition-based stats.
 Identities = 262/683 (38%), Positives = 387/683 (56%), Gaps = 55/683 (8%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSL----------------------------- 34
            IK+  PDGS++      +  D+A SIS  L                             
Sbjct: 1   MIKIQLPDGSVREVAKGTSPLDIANSISPRLAAAVVVARVRSLQPTTDGATTETETTAAT 60

Query: 35  ---AKKAV--AVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIRHSCAHIMAEAVQSI 88
              +++A+    A   ++ DL+ P+ E  ++E++   DP +L V+RHS AH+MA A+  +
Sbjct: 61  ETQSEEAMYGGAAQAERLVDLTTPLTEDVALELLKETDPATLRVVRHSAAHVMATAILEL 120

Query: 89  WPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE 148
           +PE ++  GP  ++GF+YD  +E PF+  +LA IE+KM E++ARD  F++     EK   
Sbjct: 121 FPETKLGHGPATDNGFFYDVYREVPFTEADLASIEQKMAEVVARDEKFVRVEEPREKGLT 180

Query: 149 LFESKKEAYKVEILESIPA-KENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAY 207
            + ++ E  KV  +E      + ++LY+ G + D CRGPHV ST +VK F K+M +AGAY
Sbjct: 181 DYAAQGEFMKVHFIERFTKPGDEISLYKNGNFTDFCRGPHVPSTSRVKAF-KVMSIAGAY 239

Query: 208 WRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGS-GVI 266
           W GD     L RIYGTA+  Q++L  +   LEE + RDHR L +++DLF I E    G+I
Sbjct: 240 WLGDEKNQQLQRIYGTAFFNQKDLDAHFKHLEEIKARDHRVLGKQLDLFSIQEVAGAGLI 299

Query: 267 FWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD 325
           FWH KG  I +T+  +MR +  +  Y  + TP ++ + LW+ SGH   Y  NM+     D
Sbjct: 300 FWHPKGGLIRKTMEDWMRAECVRRGYNLVVTPHIMRRELWKISGHEGYYSDNMYPPMELD 359

Query: 326 DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRG 385
           D       + LKPMNCPGH+ ++ +  KSYR+LPVR AE G+VYR E SG++HGL+RVRG
Sbjct: 360 DA-----EYRLKPMNCPGHILIYKNSPKSYRDLPVRYAELGNVYRYERSGTMHGLLRVRG 414

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR----PEKRVGSDALW 441
           FTQDDAH+FCT +Q+ +E +       S+   FGF    V+LST     P+   GS   W
Sbjct: 415 FTQDDAHIFCTPDQIEDEVVACIEFAQSVLTTFGFADFKVELSTWDPKKPQDYTGSADHW 474

Query: 442 DDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFN 501
             A N +K  L       +  I    + GE AFYGPK +  L D +GR WQ  T+Q DFN
Sbjct: 475 ATAINSLKTAL------GRKNIPFVEIPGEAAFYGPKIDVKLVDVLGRLWQLSTVQFDFN 528

Query: 502 LPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT 561
           LP+RF   Y+    E+  PVM+HRA+FGS+ERF G++IE++ G  P+WL+P+Q  +  I+
Sbjct: 529 LPARFELEYIGEDGERHRPVMVHRALFGSVERFFGVLIEHYAGAFPMWLAPVQVGLVPIS 588

Query: 562 -SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
               + YA+ +   L++  L +E D  N  +N KIR+  ++K P I++ GDKEA+  S+ 
Sbjct: 589 NEKHLAYAESVKARLEAAGLRVELDGGNGKMNAKIRDFGLQKFPFILVLGDKEAASDSVS 648

Query: 621 IRRFGSTTTQKVSLLDAIPILTK 643
           +R         V++ + I    K
Sbjct: 649 VRVRAKGDEGSVTVDEFIARAKK 671


>gi|332251676|ref|XP_003274972.1| PREDICTED: threonyl-tRNA synthetase, cytoplasmic isoform 2
           [Nomascus leucogenys]
          Length = 756

 Score =  605 bits (1560), Expect = e-171,   Method: Composition-based stats.
 Identities = 242/681 (35%), Positives = 358/681 (52%), Gaps = 56/681 (8%)

Query: 2   PSDIKLTFPDGSIKNFP-VHATGSDVAESIS----------------------------- 31
              IK+T PDG   +      T   +A  IS                             
Sbjct: 80  SKPIKVTLPDGKQVDAESWKTTPYLIACGISHTASCINLSSLASLLASVAIPSSGMPWPP 139

Query: 32  ----RSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSCAHIMAEAVQ 86
               + LA   V   +N  V DL  P+ E S +E++  ED  + AV  HS AHIM EA++
Sbjct: 140 LFFLQGLADNTVIAKVNNVVWDLDRPLEEDSTLELLKFEDEEAQAVYWHSSAHIMGEAME 199

Query: 87  SIWPEVQVAIGPIIEDGFYYDFDKEQP-FSSDELAQIEKKMQEIIARDSPFLKQYLSHEK 145
            ++    +  GP IE+GFYYD   E+   SS++ + +E   ++II     F +  +  E 
Sbjct: 200 RVYGGC-LCYGPPIENGFYYDMYLEEGGVSSNDFSSLEALCKKIIKEKQAFERLEVKKET 258

Query: 146 ARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAG 205
              +F+     +K  IL         T+YR G   DLCRGPHVR TG++K   K+ K + 
Sbjct: 259 LLAMFKY--NKFKCRILNEKVNTPTTTVYRCGPLIDLCRGPHVRHTGKIK-ALKIHKNSS 315

Query: 206 AYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGV 265
            YW G ++   L RIYG ++   + L ++    EE++ RDHRK+ R+ +L+   E   G 
Sbjct: 316 TYWEGKADMETLQRIYGISFPDPKMLKEWEKLQEEAKNRDHRKIGRDQELYFFHELSPGS 375

Query: 266 IFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCA 324
            F+  KG  I+  LI ++R + +   ++E+ TP + +  LW  SGHW  Y  NMF+ +  
Sbjct: 376 CFFLPKGAYIYNALIEFIRSEYRKRGFQEVVTPNIFNSRLWMTSGHWQHYSDNMFSFEV- 434

Query: 325 DDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVR 384
                +   FALKPMNCPGH  +F+H  +S+RELP+RLA+FG ++RNE SG+L GL RVR
Sbjct: 435 -----EKELFALKPMNCPGHCLMFDHRPRSWRELPLRLADFGVLHRNELSGALTGLTRVR 489

Query: 385 GFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
            F QDDAH+FC  EQ+ +E     + + ++Y  FGF   +  LSTRPEK +G   +WD A
Sbjct: 490 RFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSIFGFSFKLN-LSTRPEKFLGDIEVWDQA 548

Query: 445 ENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPS 504
           E  ++  L+      +      +  G+GAFYGPK +  +KDAIGR  QC TIQ+DF LP 
Sbjct: 549 EKQLENSLNEFGEKWE------LNSGDGAFYGPKIDIQIKDAIGRYHQCATIQLDFQLPI 602

Query: 505 RFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSS 563
           RFN  YV+    +K  PV++HRA+ GS+ER I I+ EN+ G  P WLSP Q +V  +  +
Sbjct: 603 RFNLTYVSHDGDDKKRPVIVHRAILGSVERMIAILTENYGGKWPFWLSPRQVMVVPVGPT 662

Query: 564 AVEYAQEIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
             EYAQ++           + D     T+N KIR   + +   I++ G+KE    ++ IR
Sbjct: 663 CDEYAQKVRQQFHDAKFMADIDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKISGTVNIR 722

Query: 623 RFGSTTTQKVSLLDAIPILTK 643
              +    + ++ + I  L +
Sbjct: 723 TRDNKVHGERTISETIERLQQ 743


>gi|206900126|ref|YP_002250745.1| threonyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
 gi|206739229|gb|ACI18287.1| threonyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
          Length = 638

 Score =  605 bits (1560), Expect = e-171,   Method: Composition-based stats.
 Identities = 268/616 (43%), Positives = 390/616 (63%), Gaps = 17/616 (2%)

Query: 32  RSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWP 90
             L KK     ING + DL+   ++GS +E++  E     ++ RH+ AHI+A AV+ ++P
Sbjct: 25  EGLEKKVFGAKINGVLSDLNVFPQDGSFVELLDWESEDGRSIYRHTSAHILAHAVKELFP 84

Query: 91  EVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELF 150
           EV++ IGP IEDGFYYDF + +PFS ++L +IE KM+EII +D P  +  ++ E+A  + 
Sbjct: 85  EVKLGIGPAIEDGFYYDFYRSEPFSQEDLEKIEAKMREIIKQDLPIERIEVTREEAERIL 144

Query: 151 ESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRG 210
           +  KE +K+E+LE IP  E ++ YRQG + DLCRGPH+ STG VK F KL+ V+GAYWRG
Sbjct: 145 KEMKEDFKLELLEEIPEGERISFYRQGNFIDLCRGPHLPSTGWVKSF-KLLSVSGAYWRG 203

Query: 211 DSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFH-IAEDGSGVIFWH 269
           +   PM  RIYGT++ +++EL +YL   EE+++RDHRKL RE+++F    E G G+IF+ 
Sbjct: 204 NEKNPMFQRIYGTSFPSEEELKKYLEEREEAQRRDHRKLGRELEIFDTFEEAGPGLIFYP 263

Query: 270 RKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTI 328
            KG  +   +  + R   +K  Y  + TP ++   LW++SGHWD+YR NMF ++  D   
Sbjct: 264 PKGAMLRLIIEEFERKEHLKRGYLPVITPHLMQAELWKRSGHWDNYRENMFFLQVED--- 320

Query: 329 KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQ 388
              + +A+KPMNCPGH+ ++N  ++SYR+LP+R  E G+VYR E SG L+GL R RGFTQ
Sbjct: 321 ---KDYAVKPMNCPGHILIYNSKVRSYRDLPLRFFEMGTVYRYERSGVLYGLERARGFTQ 377

Query: 389 DDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIM 448
           DDAH+FCT+EQ+ +E   + + +  +   FG +  +V LST+PEK +GSD +W+ A   +
Sbjct: 378 DDAHIFCTQEQLEDEIKGVLDFVFYMLDSFGLKDYVVTLSTKPEKYIGSDEIWEKATQAL 437

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
           K  L+++       I+  +  GEGAFYGPK +  LK  +G+ WQ  TIQVDFNLP RF+ 
Sbjct: 438 KNALESVG------IDYRIAEGEGAFYGPKIDVGLKGLLGKMWQGPTIQVDFNLPERFDL 491

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYA 568
            Y      K  PVMIHRA+ GS ERFIGI+IE++ G  PLWL+P Q  +  I+    EYA
Sbjct: 492 TYDAPDGTKKRPVMIHRAILGSYERFIGILIEHYGGRFPLWLAPEQVRILPISEKHNEYA 551

Query: 569 QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
           + +   L+ + +  E D     +NYK+R+   +K+P I I GDKE  E  + +R   +  
Sbjct: 552 EYVLRTLRDNEIRAEIDKDQAKLNYKLRKAIAEKVPYIFIVGDKEKEEGKVSVRIH-NKD 610

Query: 629 TQKVSLLDAIPILTKE 644
                L   I  L +E
Sbjct: 611 LGVFDLSYVIAKLLEE 626


>gi|38570111|ref|NP_689547.2| probable threonyl-tRNA synthetase 2, cytoplasmic [Homo sapiens]
 gi|189083596|sp|A2RTX5|SYTC2_HUMAN RecName: Full=Probable threonyl-tRNA synthetase 2, cytoplasmic;
           AltName: Full=Threonine--tRNA ligase; Short=ThrRS;
           AltName: Full=Threonyl-tRNA synthetase-like protein 2
 gi|119622721|gb|EAX02316.1| threonyl-tRNA synthetase-like 2 [Homo sapiens]
 gi|124376838|gb|AAI32672.1| Threonyl-tRNA synthetase-like 2 [Homo sapiens]
 gi|187953219|gb|AAI36316.1| Threonyl-tRNA synthetase-like 2 [Homo sapiens]
          Length = 802

 Score =  605 bits (1560), Expect = e-171,   Method: Composition-based stats.
 Identities = 239/648 (36%), Positives = 357/648 (55%), Gaps = 23/648 (3%)

Query: 2   PSDIKLTFPDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
            + I +   DG          T   VA  IS+ LA+  V   +NG++ DL  P+  + S+
Sbjct: 159 SNIITVRVADGQTVQGEVWKTTPYQVAAEISQELAESTVIAKVNGELWDLDRPLEGDSSL 218

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDE 118
           E++T ++  + AV  HS AHI+ EA++  +    +  GP IE+GFYYD   E +  SS E
Sbjct: 219 ELLTFDNEEAQAVYWHSSAHILGEAMELYYGGH-LCYGPPIENGFYYDMFIEDRAVSSTE 277

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L+ +E   + II    PF +  +S E   E+F+     +K  IL         T+YR G 
Sbjct: 278 LSALENICKAIIKEKQPFERLEVSKEILLEMFKY--NKFKCRILNEKVNTATTTVYRCGP 335

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLC+GPHVR TG++K   K+ K +  YW G+     L RIYG ++   + +  +  F 
Sbjct: 336 LIDLCKGPHVRHTGKIKTI-KIFKNSSTYWEGNPEMETLQRIYGISFPDNKMMRDWEKFQ 394

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
           EE++ RDHRK+ +E +LF   +   G  F+  +G  I+ TL  ++R +    D+ E+ +P
Sbjct: 395 EEAKNRDHRKIGKEQELFFFHDLSPGSCFFLPRGAFIYNTLTDFIREEYHKRDFTEVLSP 454

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  LW+ SGHW  Y  NMF  +   DT      FALKPMNCPGH  +F H  +S+RE
Sbjct: 455 NMYNSKLWEASGHWQHYSENMFTFEIEKDT------FALKPMNCPGHCLMFAHRPRSWRE 508

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           +P+R A+FG ++RNE SG+L GL RVR F QDDAH+FCT EQ+  E       + S+Y  
Sbjct: 509 MPIRFADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCTVEQIEEEIKGCLQFLQSVYST 568

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF   +  LSTRPE  +G   +W++AE  ++  L       +      +  G+GAFYGP
Sbjct: 569 FGFSFQLN-LSTRPENFLGEIEMWNEAEKQLQNSLMDFGEPWK------MNPGDGAFYGP 621

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIG 536
           K +  +KDAIGR  QC TIQ+DF LP RFN  YV+    +K  PV+IHRA+ GS+ER I 
Sbjct: 622 KIDIKIKDAIGRYHQCATIQLDFQLPIRFNLTYVSKDGDDKKRPVIIHRAILGSVERMIA 681

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FRNETINYKI 595
           I+ EN+ G  P WLSP Q +V  +  +  +YA ++++         + D   + T+N KI
Sbjct: 682 ILSENYGGKWPFWLSPRQVMVIPVGPTCEKYALQVSSEFFEEGFMADVDLDHSCTLNKKI 741

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           R   + +   I++ G+KE  + ++ +R   +    ++ +  AI  L  
Sbjct: 742 RNAQLAQYNFILVVGEKEKIDNAVNVRTRDNKIHGEILVTSAIDKLKN 789


>gi|297620271|ref|YP_003708408.1| Threonyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044]
 gi|297375572|gb|ADI37402.1| Threonyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044]
          Length = 642

 Score =  605 bits (1559), Expect = e-171,   Method: Composition-based stats.
 Identities = 246/643 (38%), Positives = 378/643 (58%), Gaps = 17/643 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           +K+T  D S    P  ++  D+A  ++    ++A+AV INGK  DL+ P+ +G  +   +
Sbjct: 1   MKITLRDNSTIETPNGSSAKDLANQLNLKGPEQALAVNINGKNVDLATPLNDGDLVVFWS 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D     +  H+ AH++A+AV  I+P+ +  IGP IE GFYYDF  +   S ++  +IE
Sbjct: 61  FDDREGKEIFWHTSAHVLAQAVLRIYPDAKPTIGPPIETGFYYDFA-DLSISENDFEKIE 119

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M++I+  +    ++  +  K           YK E+++    +E ++ YRQGE+FDLC
Sbjct: 120 NEMKKIVKENYQSEREVFNT-KNEAKSSFASNPYKCEMIDGFSEEEELSGYRQGEFFDLC 178

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ + G++K F KL K +GAYWRG+S   ML+RIYG ++  +  L +YL+ +EE++K
Sbjct: 179 RGPHLPNLGKIKAF-KLTKTSGAYWRGNSENEMLTRIYGVSFPDRALLKEYLHQMEEAKK 237

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQ 302
           RDHR +  ++DLF   E+ +G+ F H KG  ++  L +Y+R  +   +Y EI TP +L +
Sbjct: 238 RDHRVIGSKLDLFSFKEEAAGMPFIHPKGMTVWTELTNYLRECLGSANYVEIKTPIMLSR 297

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHW +YR NMF  +  D        +A+KPMNCPG +  +   + SYRELP+R+
Sbjct: 298 GLWETSGHWFNYRENMFTSEIEDH------DYAIKPMNCPGCMLYYKSHVHSYRELPLRV 351

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AE G+V+R EPSG+L GL RVR F QDDAH+F     +  E L + NL   +Y  FG   
Sbjct: 352 AEIGNVHRYEPSGALSGLFRVRSFHQDDAHIFMKPSDIEGEILSLLNLFEKLYSTFGLSY 411

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
            +   +   +  +G+D  W+ A   +K  LD      +   +  +  G+GAFYGPK ++ 
Sbjct: 412 HLELSTRPEKGTIGTDEEWEQATAGLKNALD------KWGHDYKINEGDGAFYGPKIDFH 465

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           ++DAI R WQCGTIQ+D  LP RF   Y  S  E+  PVM+HRA+FGSIERF+GI+IE+F
Sbjct: 466 IRDAINRTWQCGTIQLDMALPQRFALEYTASDGERHRPVMLHRAIFGSIERFMGILIEHF 525

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  PLW+SP+QA + T+      YA E+   LK     ++ D   E+++ K+R   + +
Sbjct: 526 AGKFPLWISPLQARILTVADRHEPYAHELMQKLKQQGFRVDIDATGESVSKKVRTAQLTQ 585

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           I  I+  GDKE   +++ +R   +    ++ L   I  L KE 
Sbjct: 586 INYILTVGDKEMEHKTLNLRTRDNVVHGEIDLEAFIIALKKEK 628


>gi|297808713|ref|XP_002872240.1| AT5g26830/F2P16_90 [Arabidopsis lyrata subsp. lyrata]
 gi|297318077|gb|EFH48499.1| AT5g26830/F2P16_90 [Arabidopsis lyrata subsp. lyrata]
          Length = 713

 Score =  605 bits (1559), Expect = e-171,   Method: Composition-based stats.
 Identities = 241/647 (37%), Positives = 367/647 (56%), Gaps = 24/647 (3%)

Query: 3   SDIKLTFPDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIE 60
             IK+T PDG++K       T  D+A  IS+ LA  A+  A++  + D+S P+  +  +E
Sbjct: 77  DPIKITLPDGNVKEGKKWETTPIDIAAQISKGLANSALISAVDDVLWDMSRPLEGDCKLE 136

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII--EDGFYYD-FDKEQPFSSD 117
           +   +  +    + HS AHI+ +A++  +   Q+ IGP     +GFYYD F  E   S +
Sbjct: 137 LFKFDSDKGRDTLWHSSAHILGQALEQEY-GCQLCIGPCTTRGEGFYYDGFYGELGLSEN 195

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
               IE    +      PF +  ++ ++A E+F      +KVEI+  +PA + +T+YR G
Sbjct: 196 HFPNIEAGAAKAAKEAQPFERIEVTKDQALEMFSENN--FKVEIINDLPADKTITVYRCG 253

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
              DLCRGPH+ +T  VK F K ++ + AYWRG+  R  L R+YG ++  Q++L +YL F
Sbjct: 254 PLVDLCRGPHIPNTSFVKAF-KCLRASSAYWRGNKERESLQRVYGISYPDQKQLKKYLQF 312

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINT 296
           LEE++K DHR L ++ +LF   +   G  F+   G +++  L+ +++++     Y E+ T
Sbjct: 313 LEEAKKYDHRLLGQKQELFFSHQLSPGSYFFLPLGTRVYNRLMDFIKKQYWQRGYTEVIT 372

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P + +  LW+ SGH D+Y+ NMF          + + F LKPMNCPGH  +F H ++SYR
Sbjct: 373 PNMYNMALWETSGHADNYKDNMFTFNI------EKQEFGLKPMNCPGHCLIFQHRVRSYR 426

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ELP+RLA+FG ++RNE SG+L GL RVR F QDDAH+FCT EQ+  E   +   I  +YK
Sbjct: 427 ELPMRLADFGVLHRNEASGALSGLTRVRRFQQDDAHIFCTTEQVKEEVQGVLEFIDYVYK 486

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
            FGF   + KLSTRPEK +G    WD AE  +K  ++             +  G+GAFYG
Sbjct: 487 VFGFTYEL-KLSTRPEKYLGELETWDKAEADLKEAIEAFGKP------LVLNEGDGAFYG 539

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC-HPVMIHRAVFGSIERFI 535
           PK +  + DA+ R +QC T+Q+DF LP RFN  Y      K   PVMIHRAV GS+ER  
Sbjct: 540 PKIDITVSDAMNRKFQCATLQLDFQLPIRFNLEYAAEDEAKKAKPVMIHRAVLGSVERMF 599

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            I++E++KG  P W+SP QAIV  I+  + +YA+++   +      I+ D  +  I+ K+
Sbjct: 600 AILLEHYKGKWPFWISPRQAIVCPISEKSQKYAEKVQKEIHDAGFYIDADLTDRKIDKKV 659

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           RE  + +   I++ G+ EA+   + +R   S      S+ D +    
Sbjct: 660 REAQLAQYNYILVVGETEAATGQVSVRLRDSAAHSVKSIEDLLEEFK 706


>gi|119472992|ref|ZP_01614827.1| threonyl-tRNA synthetase [Alteromonadales bacterium TW-7]
 gi|119444612|gb|EAW25923.1| threonyl-tRNA synthetase [Alteromonadales bacterium TW-7]
          Length = 586

 Score =  605 bits (1559), Expect = e-171,   Method: Composition-based stats.
 Identities = 286/597 (47%), Positives = 392/597 (65%), Gaps = 19/597 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
           MP    +T PDGS ++F    +  DVA  I   LAK  +A  +NG   D  D + + + +
Sbjct: 1   MPV---ITLPDGSQRSFENPVSTLDVANDIGPGLAKATIAGRVNGDRVDACDLINDDARL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT +D   L +IRHSCAH++  AV+ ++PE ++AIGP I++GFYYD D +   S D+L
Sbjct: 58  EIITAKDEDGLEIIRHSCAHLIGHAVKQLYPEAKMAIGPTIDNGFYYDIDLDHSLSQDDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             IEK+M ++   +   +K+ +S ++AR+ FE++ E YK+EIL E+I   +   LY   E
Sbjct: 118 DAIEKRMLQLAKTNYDVVKKTVSWQEARDTFEARGETYKMEILDENIAKDDRPGLYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +    + F K+MKVAGAYWRGDS   ML RIYGTAW  +++L  YL  L
Sbjct: 178 YVDMCRGPHVPNMKFCQNF-KIMKVAGAYWRGDSENKMLQRIYGTAWGDKKQLKAYLKRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+EKRDHR++ + +DL+H  E+  G++FWH  GW I++ L  ++R K+++  YEE+  P
Sbjct: 237 EEAEKRDHRRIGKALDLWHWQEEAPGMVFWHNDGWSIYRELEEFVREKLREYSYEEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW++SGHW+ Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+
Sbjct: 297 MMMDRSLWEKSGHWEKYSDAMFT------TESEKREYAIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFG  +RNEPSG+LHGLMRVRGFTQDDAHVFCT+EQ+ +E      ++   Y+ 
Sbjct: 351 LPLRMAEFGCCHRNEPSGALHGLMRVRGFTQDDAHVFCTEEQVMDEVSACIKMVYDTYET 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF+KI+VKLSTRPEKR+G D +WD AE  +   L        + I    L GEGAFYGP
Sbjct: 411 FGFDKIVVKLSTRPEKRIGDDEIWDKAEVALADALKA------NDIEFDYLPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF LP R  A YV  ++E+  PVMIHRA+ GSIERFIGI
Sbjct: 465 KIEFTLYDCLDRAWQCGTVQLDFALPGRLGATYVAENNERRTPVMIHRAILGSIERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
           + E + G  P WL+P Q ++  IT    +Y  EI   L    +    D RNE I +K
Sbjct: 525 LTEEYAGLFPTWLAPKQVVIMNITDKQADYVHEIVQKLNKLGIRAAADLRNEKIGFK 581


>gi|218295928|ref|ZP_03496708.1| threonyl-tRNA synthetase [Thermus aquaticus Y51MC23]
 gi|218243666|gb|EED10194.1| threonyl-tRNA synthetase [Thermus aquaticus Y51MC23]
          Length = 660

 Score =  605 bits (1559), Expect = e-170,   Method: Composition-based stats.
 Identities = 274/657 (41%), Positives = 405/657 (61%), Gaps = 25/657 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIIT 63
           + +  PDG     P  AT  +VAE I   LAK+AV   +NG+V DL  P+  G ++ I+T
Sbjct: 1   MTVYLPDGKALEVPEGATAKEVAERIGPGLAKRAVGAIVNGEVYDLLKPLPPGATVRILT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPE-------VQVAIGPIIEDGFYYDFDKEQPFSS 116
            +DP    + RH+ AH++A+AV+  + E       V++ +GP+IE GFYYD D  +P S 
Sbjct: 61  EKDPEYQLLFRHTLAHVLAQAVKEFFREKGYDPESVRLGVGPVIEKGFYYDIDAPEPLSD 120

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
           ++L QIE+KM+EI+ RD P  +  L  E A   ++  K+ YK E++  +P  E ++ Y+Q
Sbjct: 121 EDLPQIEEKMREILRRDLPLKRYVLPREAALARYQG-KDPYKTELILDLPEGEEISFYQQ 179

Query: 177 GE----WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELT 232
           G+    + DLCRGPHV STG++   FKL  VAGAYWRGD  RPML R+YG A+ T +EL 
Sbjct: 180 GDEAFGFTDLCRGPHVPSTGRIPPHFKLTHVAGAYWRGDERRPMLQRVYGVAFRTAEELK 239

Query: 233 QYLYFLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRRK-IKDD 290
           +YL+ LEE++KRDHR+L RE++LF I      G++ W  KG  I + LI++MR + IK  
Sbjct: 240 EYLWQLEEAKKRDHRRLGRELELFLIDPMVGKGLVLWLPKGNVIREELIAFMREEQIKRG 299

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH 350
           Y+ + TP +    L++ SGH+  Y  + F      +   +   + LKPMNCP H+ ++ H
Sbjct: 300 YQLVTTPHIGSLELYKTSGHYPYYAESQFPPISFKER-GEEEEYLLKPMNCPHHIRIYAH 358

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
             +SYRELP+RLAEFG+VYR E +G L GL RVRGFTQDDAH+FC  E +  E L + +L
Sbjct: 359 KKRSYRELPLRLAEFGTVYRYEKAGELLGLTRVRGFTQDDAHIFCAPEDVKGEFLGVLDL 418

Query: 411 IISIYKDFGFEKIMVKLSTRPEK---RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGV 467
           ++ ++   G +    ++ TR  K    VG +A W  AE  ++        + +  ++  V
Sbjct: 419 VLKVFATLGLKDFRARIGTRDPKSDKYVGDEARWSLAERQIEEA------ALEAGLHYTV 472

Query: 468 LLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAV 527
             G+ AFYGPK ++++KDA+GR+WQ GTIQVD+NLP RF   YV    E+  PV++HRA 
Sbjct: 473 EEGDAAFYGPKLDFVVKDALGREWQLGTIQVDYNLPERFGLTYVGKDGEEHRPVVLHRAP 532

Query: 528 FGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR 587
           FGS+ERFIGI+IE+F G+ PLWLSP+Q +V  ++    +YA E+ + LK   L  E D R
Sbjct: 533 FGSLERFIGILIEHFAGDFPLWLSPVQVVVVPVSEKQEDYALEVTHRLKEAGLRAEADTR 592

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            E +  +IR+  +KK+P +++ G+KE +E ++ +RR        + L   +    +E
Sbjct: 593 PERMQARIRDAELKKVPYVLVVGEKEKAEGAVSVRRRHRGNLGVMPLFTFVEGALRE 649


>gi|149057085|gb|EDM08408.1| threonyl-tRNA synthetase-like 2, isoform CRA_a [Rattus norvegicus]
          Length = 790

 Score =  605 bits (1559), Expect = e-170,   Method: Composition-based stats.
 Identities = 232/645 (35%), Positives = 353/645 (54%), Gaps = 23/645 (3%)

Query: 5   IKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           I +    G +++      T   VA  IS+ LA+  V   +NG + DL  P+  + ++E++
Sbjct: 150 ISVRVAGGKTVQGEEWKTTPYQVAAGISKELAENTVIAKVNGVLWDLDRPLEGDSTVELL 209

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
             ++  + AV  HS AH++ EA++  +    +  GP IE+GFYYD    ++  SS EL+ 
Sbjct: 210 MFDNEEAQAVYWHSSAHVLGEAMELYYGGH-LCYGPPIENGFYYDMFIGDRVVSSTELSA 268

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +E   + II    PF +  +S +   E+F+     +K  IL+        T+YR G   D
Sbjct: 269 LENICKTIIKEKQPFERLEVSKDSLLEMFKY--NKFKCRILKEKVDTPTTTVYRCGPLID 326

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LC+GPHVR TG++K   K+ K +  YW G+     L R+YG ++   + +  +  F EE+
Sbjct: 327 LCKGPHVRHTGKIK-AIKIFKNSSTYWEGNPEMETLQRVYGISFPDSKMMRDWEKFQEEA 385

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVL 300
             RDHRK+ +E +LF   +   G  F+  +G  I+ TL+ ++R +    ++ E+ +P + 
Sbjct: 386 RSRDHRKIGKEQELFFFHDLSPGSCFFLPRGAFIYNTLMDFIREEYHKRNFTEVLSPNMY 445

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  LW+ SGHW  Y  NMF      DT      FALKPMNCPGH  +F H  +S+RE+PV
Sbjct: 446 NSKLWETSGHWQHYSNNMFTFDIEKDT------FALKPMNCPGHCLMFAHRPRSWREMPV 499

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R A+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+  E     + + S+Y  FGF
Sbjct: 500 RFADFGVLHRNELSGTLTGLTRVRRFQQDDAHIFCMVEQIEEEIKGCLHFLQSVYSTFGF 559

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
              +  LSTRPE  +G   +WD+AE  ++  L       +      +  G+GAFYGPK +
Sbjct: 560 SFQLN-LSTRPEHFLGETEIWDEAERQLQNSLTGFGKPWK------INPGDGAFYGPKID 612

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC-HPVMIHRAVFGSIERFIGIMI 539
             +KDAIGR  QC TIQ+DF LP RFN  YV+   +    PV+IHRA+ GS+ER I I+ 
Sbjct: 613 IKIKDAIGRYHQCATIQLDFQLPIRFNLTYVSKDGDDKNRPVIIHRAILGSVERMIAILS 672

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREH 598
           EN+ G  PLWLSP Q ++  +  +   YA +++          + D  +  T+N KIR  
Sbjct: 673 ENYGGKWPLWLSPRQVMIIPVGPACENYALQVSKECFEEGFMADVDLDDSCTLNKKIRNA 732

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            + +   I++ G+KE    S+ +R   +    ++S+   I  L  
Sbjct: 733 QLAQYNFILVVGEKEKLNNSVNVRTRDNKIHGEISITSVIEKLKN 777


>gi|220928798|ref|YP_002505707.1| threonyl-tRNA synthetase [Clostridium cellulolyticum H10]
 gi|219999126|gb|ACL75727.1| threonyl-tRNA synthetase [Clostridium cellulolyticum H10]
          Length = 645

 Score =  604 bits (1558), Expect = e-170,   Method: Composition-based stats.
 Identities = 246/649 (37%), Positives = 383/649 (59%), Gaps = 18/649 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            IK+T  DGS K +    T  +VAESIS  LA+ A+A  ++GKV +L   +  + S+ ++
Sbjct: 1   MIKITLKDGSNKEYQSGITIKEVAESISAGLARAALAGEVDGKVKELDFKLNNDCSLSLL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T  D       RH+ +H++A+AV+ ++P V++AIGP IE+GFYYDFD ++ F+ ++LA+I
Sbjct: 61  TFADEGGRLAYRHTASHVLAQAVKRMFPNVKLAIGPAIENGFYYDFDTDKNFAPEDLAKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M++II  D    +  L  ++A +  E K E YK+E+++ +P  E ++ Y+QG++ DL
Sbjct: 121 EKEMEKIIKEDISLERFTLPRDEAIKFMEEKGEPYKIELIKELPEGEEISFYKQGDFVDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPH+ STG++K   KLM  AGAYWRG+    ML RIYGTA+  + EL +Y+  LEE++
Sbjct: 181 CAGPHLLSTGKLK-AVKLMSAAGAYWRGNEKNKMLQRIYGTAFPKKSELEEYVTKLEEAK 239

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVL 300
           KRDH KL RE++LF   E+ G G+     KG +I QTL  ++   + +  Y    TP + 
Sbjct: 240 KRDHNKLGRELELFTTVEEIGQGLPLLMPKGARIVQTLQRFVEDEEERRGYVLTKTPLMA 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
              L++ SGHW  Y+  MF +    D  KD    AL+PM CP    ++N  L SYR+LP+
Sbjct: 300 KSDLYKLSGHWQHYKDGMFLL---GDEEKDEEVMALRPMTCPFQFMIYNTKLHSYRDLPI 356

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R  E  +++RNE SG +HGL+RVR FT  + H+ CT EQ+ +E   + +LI  + +  G 
Sbjct: 357 RYGETSTLFRNEASGEMHGLIRVRQFTISEGHLVCTPEQLEDEFKGVVDLIKFMMETLGI 416

Query: 421 EKIMVKL-----STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           +  +            EK +G++  W++ ++ M+ +LD +K      I+     GE AFY
Sbjct: 417 QDDVTYRFSKWDPKNKEKYIGNEEDWENVQDQMRTILDHLK------IDYKEAEGEAAFY 470

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +   K+  G++    T+QVDF L  R N  YV+ ++EK HP +IHR   G  ER +
Sbjct: 471 GPKLDIQCKNVHGKEDTIITVQVDFALAERLNMVYVDKNNEKKHPYIIHRTSIGCYERTL 530

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            I+IE + G  P WL P+QA +  +     ++AQ++A +L+   + +E D RNE I YKI
Sbjct: 531 AILIEKYAGAFPTWLCPVQAKILPLVDKHHDFAQKVAQMLRDKGVKVEVDTRNEKIGYKI 590

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           RE  ++KIP +++ GDKE    ++ +R         +     +  + +E
Sbjct: 591 REAQMEKIPYMLVIGDKEMENNAVSVRSRKDGDLGAMPAEQFVDRIVEE 639


>gi|225849423|ref|YP_002729587.1| threonyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225644143|gb|ACN99193.1| threonyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 641

 Score =  604 bits (1558), Expect = e-170,   Method: Composition-based stats.
 Identities = 264/647 (40%), Positives = 413/647 (63%), Gaps = 21/647 (3%)

Query: 4   DIKLTFPDGSIK-NFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEI 61
            I++   D + K N+    T  ++ +++     K  +     G++ D+  P+++ GS+++
Sbjct: 1   MIEIFIEDLNQKFNYKEGITLKEILQNL-NGKFKDVIGGKFEGEIIDVHTPIKKSGSLKL 59

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPE--VQVAIGPIIEDGFYYDFDKEQPF-SSDE 118
           +T +DP SL ++RHS AHIMA+A++ I+ +  V + IGP  E+GFYYD + E    + ++
Sbjct: 60  LTKKDPESLEILRHSLAHIMAQALKEIYGDENVHLGIGPTTENGFYYDVEIEGVRLTDED 119

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE-SIPAKENVTLYRQG 177
           L +IE+KM+EII +     +  L  E+A + FE KKE YK++I++ +IP  E ++LY+QG
Sbjct: 120 LPKIEEKMKEIIKKGYQIERYELPREEAVKFFEEKKEIYKIDIIKHNIPEGEPISLYKQG 179

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           ++ DLCRGPH+ ST +   F KL+ V+GAYWRG    PML RIYG A+ + +EL  YL  
Sbjct: 180 DFVDLCRGPHLPSTDKAGAF-KLISVSGAYWRGKETNPMLQRIYGVAFWSDKELKDYLNM 238

Query: 238 LEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLIS-YMRRKIKDDYEEIN 295
           LEE++KRDHRK+ +E++LF I E+ G G+  W  KG  I + +   +    +K  Y+ + 
Sbjct: 239 LEEAKKRDHRKIGKELELFMIDEEVGGGLAIWLPKGAIIRKEIEDAWKEEHLKRGYQLVY 298

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP V  +HLWQ SGH   Y+ NM+          +   + +KPMNCP HV ++    +SY
Sbjct: 299 TPHVGKEHLWQTSGHLSFYQENMYPRMQI-----EEEGYYVKPMNCPFHVEIYKSKQRSY 353

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           +ELP+RLAE G+VYR E SG+LHGLMRVRGFTQDDAH+ C ++Q+ +E   + N  +   
Sbjct: 354 KELPIRLAELGTVYRYERSGALHGLMRVRGFTQDDAHIICREDQVEDEIRDVLNFALDTL 413

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           K +GF++  + LSTRPEK VG D +W+ A   ++  +++        I+  +  G GAFY
Sbjct: 414 KSYGFDEFEIYLSTRPEKSVGDDRMWEVATQSLRKAIESTG------IDYKIDEGGGAFY 467

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +KDAIGR WQC TIQ DFNLP RF+ +Y+   +++  P MIHRA+FGSIERFI
Sbjct: 468 GPKIDVKIKDAIGRMWQCSTIQFDFNLPQRFDMYYIGEDNQRHRPYMIHRAIFGSIERFI 527

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
           G+++E++ G LP+WLSP+Q  +  I    +++A ++ ++L  + + +E D R+E +N KI
Sbjct: 528 GVLLEHYAGFLPVWLSPVQVKIIPIADKHLDFANKVKDILLQNKVRVEVDDRSERMNKKI 587

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           R+  ++KIP +++ GDKE    S+ +R   S  T+ +++ + +  +T
Sbjct: 588 RDAELQKIPFMLVIGDKEVENNSVAVREKASGKTESMTVDNFVKKIT 634


>gi|225568704|ref|ZP_03777729.1| hypothetical protein CLOHYLEM_04783 [Clostridium hylemonae DSM
           15053]
 gi|225162203|gb|EEG74822.1| hypothetical protein CLOHYLEM_04783 [Clostridium hylemonae DSM
           15053]
          Length = 583

 Score =  604 bits (1558), Expect = e-170,   Method: Composition-based stats.
 Identities = 257/592 (43%), Positives = 390/592 (65%), Gaps = 15/592 (2%)

Query: 55  REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPF 114
           ++GS++ +T  D       RH+ +HI+A+AV+ ++P+ ++AIGP ++DG+YYDF+   PF
Sbjct: 6   KDGSVQDLTFADEVGQEAFRHTTSHILAQAVKRLYPDTKLAIGPAVKDGYYYDFEFSFPF 65

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
           +++ LA++EK+M+ I+    P  +  +S E+A +L E + E+YKVE+++++P +E ++LY
Sbjct: 66  TTEHLAEVEKEMRRIVKESLPLERSVVSREEALKLMEERGESYKVEMIQALPKEEEISLY 125

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
           RQGE+ D C GPHV +T  +K F KL  VAGAYW GD N  ML+RIYGT++    EL  Y
Sbjct: 126 RQGEFVDFCAGPHVSNTSVIKAF-KLQSVAGAYWHGDENNQMLTRIYGTSFPKADELDAY 184

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEE 293
           L  +EE+  RDHRKL +E+ LF I ++G G  F+  KG  +   LI Y R+  +++ Y E
Sbjct: 185 LKRMEEARLRDHRKLGKELGLFAIMDEGPGFPFFLPKGMVLKNLLIDYWRQLHLREGYVE 244

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           I+TP +L +HLW+ SGHWD Y+ NM+       T+ D   +A+KPMNCPG + V+    +
Sbjct: 245 ISTPIILSRHLWENSGHWDHYKDNMYT------TVIDEEDYAVKPMNCPGGMLVYKVEPR 298

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SY++LP+R+ E G V+R+E SG LHGLMRVR FTQDDAH+F T++Q+ +E   +  LI  
Sbjct: 299 SYKDLPMRVGELGLVHRHEKSGQLHGLMRVRCFTQDDAHIFMTEDQIRDEIKGVARLIDE 358

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           +Y  FGF+   V+LSTRPE  +GSDA W+ A   ++G L+ +       ++  V  G+GA
Sbjct: 359 VYSKFGFKYH-VELSTRPENSMGSDADWEMATEGLRGALEELG------MDYVVNEGDGA 411

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK ++ L+D+IGR WQCGTIQ+DF +P RF   Y  +  EK  P+MIHR  FGSIER
Sbjct: 412 FYGPKIDFHLEDSIGRTWQCGTIQLDFQMPQRFELEYTGADGEKHRPIMIHRVAFGSIER 471

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           FIGI+IE++ G  P WL+P+Q  +  ++    +YAQ++ + LK+  + +E D R+E + Y
Sbjct: 472 FIGILIEHYAGKFPTWLAPVQVKILPVSDKFADYAQKVTDELKAAGIRVELDGRSEKLGY 531

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           KIRE  ++K+P +II G+KE +E  + +R+        + L      + ++ 
Sbjct: 532 KIREAQMQKVPYMIIVGEKEVAENVVSVRKRDEGDIGSMELKTFTEKVLEDK 583


>gi|163782015|ref|ZP_02177014.1| threonyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159882547|gb|EDP76052.1| threonyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 641

 Score =  604 bits (1557), Expect = e-170,   Method: Composition-based stats.
 Identities = 259/638 (40%), Positives = 392/638 (61%), Gaps = 21/638 (3%)

Query: 12  GSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSL 70
           G         T  ++ E       K A+   +  ++ DL  P+ EG  I+ I   DP SL
Sbjct: 13  GKEVEVEKGTTLGEIFEKAGI---KDALGGKLGDRIIDLQTPINEGGEIKPIYKNDPESL 69

Query: 71  AVIRHSCAHIMAEAVQSIWPE--VQVAIGPIIEDGFYYDFDKE-QPFSSDELAQIEKKMQ 127
            ++RHS AHIMA+A++ ++    V + +GP  E+GFYYD + E    + ++L +IE+KM+
Sbjct: 70  EIMRHSLAHIMAQALKELYGAEVVHLGVGPTTEEGFYYDVEVEGHRITEEDLPKIEEKMR 129

Query: 128 EIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPH 187
           EII RD P L++ L  ++A +LF   KE YK++I++ I  ++ +++Y+QG++ DLCRGPH
Sbjct: 130 EIIKRDYPILRKELERDEAIKLFNDLKEKYKIDIIQRISPEDVISVYQQGDFIDLCRGPH 189

Query: 188 VRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHR 247
           + STG+   F KL  ++GAYW G +++P L+RIYG A+ + +EL Q L F EE++KRDHR
Sbjct: 190 LPSTGKAGSF-KLTSISGAYWLGKADQPQLTRIYGMAFWSDKELRQRLRFYEEAKKRDHR 248

Query: 248 KLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLW 305
           KL R+++ F I E+   G++ W  +G    + L  Y + +  K  Y+ + TP V    LW
Sbjct: 249 KLGRDLEFFMIDENVGAGLVLWLPRGSIYRKVLEDYWKEEHIKRGYQFVYTPHVGKSKLW 308

Query: 306 QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEF 365
           + SGH + Y+ NMF          +   + +KPMNCP H+A++   ++SY++LPV+LAE 
Sbjct: 309 EISGHLECYKPNMFPAMEM-----EGEEYYVKPMNCPFHIAIYKSKVRSYKDLPVKLAEL 363

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
           G+VYR E SG LHGL+RVRGFTQDDAH+ CT EQ+        +L +S+ KDFGF+   +
Sbjct: 364 GTVYRYEMSGVLHGLLRVRGFTQDDAHIICTPEQVDEVIRDTLDLALSMLKDFGFDDFKI 423

Query: 426 KLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKD 485
            +STRPE  +GSD  W+ +EN +K  ++ +  +        +  G GAFYGPK +  ++D
Sbjct: 424 YVSTRPEDAIGSDEQWEVSENALKKAVEDLGYT------YEIDEGGGAFYGPKIDVKIRD 477

Query: 486 AIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           AIGR WQC TIQ DFNLP RF+  YV   ++K  P MIHRA  GSIERF GI++E++ G 
Sbjct: 478 AIGRLWQCSTIQFDFNLPERFDMTYVGPDNKKHRPYMIHRAFLGSIERFTGILLEHYAGL 537

Query: 546 LPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPI 605
           LP+WLSP QA +  I    +EY +++ + L+     ++ D R+E +N KIRE  + KIP 
Sbjct: 538 LPVWLSPTQARIVPIADRHLEYGRKVLSRLQEEGFRVDMDERDERMNAKIREAELMKIPY 597

Query: 606 IIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +++ GD+E    ++ +R         +SL + I  L +
Sbjct: 598 VLVVGDREVEAGTVSVRSKKEGNLGSMSLEEFIEHLRE 635


>gi|110802298|ref|YP_699583.1| threonyl-tRNA synthetase [Clostridium perfringens SM101]
 gi|123047184|sp|Q0SQM4|SYT_CLOPS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|110682799|gb|ABG86169.1| threonine--tRNA ligase [Clostridium perfringens SM101]
          Length = 643

 Score =  604 bits (1557), Expect = e-170,   Method: Composition-based stats.
 Identities = 237/649 (36%), Positives = 369/649 (56%), Gaps = 20/649 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+T  DGSIK      +  ++A+SIS+ LA+ A    +NGKV DL   V  + S+EI 
Sbjct: 1   MIKITLKDGSIKEVEAGLSIFEIAQSISQGLARNACCGILNGKVEDLRFIVNEDSSLEIC 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +         H+ +H++A AV+ ++P+ ++AIGP I++GFYYDFD E+ FS+D+L ++
Sbjct: 61  TFDSKEGQHAFNHTASHVLAAAVKRLFPQDKLAIGPSIDNGFYYDFDTEKSFSADQLNKL 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E++M++II  +    +  L   +A EL +   E YKVE++  +P  E ++ Y+ G++ DL
Sbjct: 121 EEEMKKIIKENPEIKRFELPRNEALELMK--DEPYKVELINDLPEGEVISFYQIGDFVDL 178

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPH+ +   +K   KL++  GAYW+GD    MLSR+YGTA+  + EL  YL  LEE++
Sbjct: 179 CAGPHLMAVKPIK-AVKLLRSTGAYWKGDEKNKMLSRVYGTAFPKKSELDAYLEALEEAK 237

Query: 243 KRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVL 300
           KRDH KL RE+ +F   E+   G+     KG +I QTL  ++   + +  Y    TP + 
Sbjct: 238 KRDHNKLGRELGIFTTDENVGQGLPLLMPKGARIIQTLQRWIEDEEQRRGYVLTKTPLMA 297

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
              L++ SGHWD Y+  MF +    D  KD   FAL+PM CP   A++N    SYR+LPV
Sbjct: 298 KSDLYKISGHWDHYKDGMFVL---GDEEKDSEVFALRPMTCPFQYAIYNSTQHSYRDLPV 354

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R AE  +++RNE SG +HGL+RVR FT  D H+ CT EQ+ +E     +L+  + +  G 
Sbjct: 355 RFAETSTLFRNESSGEMHGLIRVRQFTLADGHIVCTPEQLEDEFKNTVDLVKYVMETLGI 414

Query: 421 EKIMVKL-----STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
              +            EK +     W++ +NIM+ +L+ +       I+      E AFY
Sbjct: 415 ADDITYRFSKWDPNNTEKYINDPEAWENTQNIMREILNHLN------IDFTEADDEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +   K+  G++    TIQ+DF L  RF  +Y++   EK  P +IHR+  G  ER +
Sbjct: 469 GPKLDIQFKNVHGKEDTIITIQIDFALAERFGMYYIDKDGEKKRPYIIHRSSIGCYERTL 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE + G LP W++P+QA V  ++    +YA E+   L+   + +E D R E I YKI
Sbjct: 529 AMLIEKYAGALPTWIAPVQAKVLPLSDKYADYANEVVEELRRRGVRVEADHRAEKIGYKI 588

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           RE  +++ P I++ G+KEA  + + +R   +     + L D +  +  E
Sbjct: 589 REARLERTPYILVVGEKEAENKEVSVRSRKNGEEGAMPLADFVNRIVLE 637


>gi|168064726|ref|XP_001784310.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162664141|gb|EDQ50872.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 685

 Score =  604 bits (1557), Expect = e-170,   Method: Composition-based stats.
 Identities = 228/651 (35%), Positives = 368/651 (56%), Gaps = 25/651 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHAT-GSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIE 60
             IK+T PDG++++     T   DVA  IS+ LA  A+   +NG + D++ P+  + +++
Sbjct: 48  DPIKITMPDGAVRDGKKWITSPMDVAREISQGLANSALIAEVNGVLWDMTRPLEGDCTLQ 107

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII--EDGFYYD--FDKEQPFSS 116
           +   E  +      HS AHI+ ++++  +   ++ IGP     +GFYYD  +        
Sbjct: 108 LHKFESDKGRDTFWHSSAHILGQSIEMTY-GCKLCIGPCTTRGEGFYYDAFYHGLTLTEK 166

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
           D+  +I+ +  + +    PF +  ++ E+A E F      +KVEI+  +P  + +T+YR 
Sbjct: 167 DDFGKIQAQANKAVKDKQPFERIEVTREQALEFFAE--NPFKVEIINELPEDKTITVYRC 224

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           G   DLCRGPH+ ST  VK F   ++ + +YWRG ++R  L R+YG ++   + L +YL+
Sbjct: 225 GPLVDLCRGPHIPSTSHVKAF-ACLRASASYWRGRADRESLQRVYGISYPDNKLLKEYLH 283

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEIN 295
            +EE++KRDHRKL ++ +LF   E   G  F+   G +I+  L +++R + +   YEE+ 
Sbjct: 284 NVEEAKKRDHRKLGQQQELFFFHELSPGSCFFLPHGARIYNKLQAFIRDEYRKRGYEEVV 343

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           +P + +  LW+ SGH  +Y+ NMF  +       + + F LKPMNCPGH  +F+H ++SY
Sbjct: 344 SPNMFNMQLWETSGHAANYKDNMFTFEV------EKQEFGLKPMNCPGHCLIFDHRVRSY 397

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP+RLA+FG ++RNE SG+L GL RVR F QDDAH+FC + Q+  E     + +   Y
Sbjct: 398 RELPLRLADFGVLHRNELSGALSGLTRVRRFQQDDAHIFCMESQLLTEVKGALDFLEFAY 457

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
             FGF   + +LSTRPEK +G    W+ AE  ++  L+      Q      +   +GAFY
Sbjct: 458 GVFGFTFEL-ELSTRPEKYLGEIETWNRAEKALEAALNAFGKPWQ------INEADGAFY 510

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERF 534
           GPK +  + DA+ R +QC TIQ+DF LP RFN  Y      ++  PV+IHRA+ GS+ER 
Sbjct: 511 GPKIDITVFDALKRKFQCATIQLDFQLPIRFNLSYSTEDEAKREKPVIIHRAILGSVERM 570

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             I++E++ G  P WLSP Q IV  ++     YA E+ + + +     E D  +  +  K
Sbjct: 571 FAILLEHYAGKWPFWLSPRQCIVCPVSEKFTHYAVEVRDAINAAGYFCEADVTDRKLQKK 630

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           IRE  + +   I++ G++E S++ + IR   +      S+ + +    KE+
Sbjct: 631 IREAQLAQFNYILVVGEEETSKKQVNIRTRDNVVHGTKSVTELLADFQKET 681


>gi|283851379|ref|ZP_06368661.1| threonyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
 gi|283573329|gb|EFC21307.1| threonyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
          Length = 647

 Score =  604 bits (1557), Expect = e-170,   Method: Composition-based stats.
 Identities = 264/648 (40%), Positives = 403/648 (62%), Gaps = 18/648 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS--IEII 62
           +++T  D S++     + G  ++ +IS    K +VA  +NG+  D++ P+ E +  +E +
Sbjct: 1   MQVTIEDTSLEAAAGESCGQVLSRAISGKRFKNSVACLVNGQPVDMTAPLPEDARELEPV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
             + P  L++IRHS AHIMAEAV+ ++P VQV IGP IE+GFYYDF  E+PF+ ++L  I
Sbjct: 61  AVDSPLGLSIIRHSAAHIMAEAVKKLFPSVQVTIGPAIENGFYYDFAFERPFTPEDLEAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M+  IA + PF   Y+    A+ LF S+ E+YK+EI++     + V+LYR G + DL
Sbjct: 121 EAEMRASIAANHPFSCTYVPKADAKALFASQGESYKLEIMDENIVGDTVSLYRHGLFTDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +TG V+   KL+ VAGAYWRGD  RPML RIYGTA+ ++ +L  YL  LEE++
Sbjct: 181 CRGPHVPTTGMVR-AVKLLSVAGAYWRGDEKRPMLQRIYGTAFASEADLKTYLKHLEEAK 239

Query: 243 KRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVL 300
           KRDHRKL  ++DLF  +E+   G+  WH KG  +   L  + RR+ +K  Y  +  P +L
Sbjct: 240 KRDHRKLGTQLDLFSFSEEVGAGMPIWHPKGELVRTILEDFERREHLKRGYSLVRGPLIL 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            + LW++SGH+D+YR NM+       T  D +++ +KPMNC  H+ ++   ++SYR+LP 
Sbjct: 300 RRELWERSGHYDNYRENMYF------TEIDEQSYGIKPMNCLAHMLIYKSRIRSYRDLPQ 353

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R  E G V+R+E SG LHGL+RVR FTQDDAH+ C  +Q+  E   +   +  +   FGF
Sbjct: 354 RYFELGVVHRHEKSGVLHGLLRVRQFTQDDAHILCRPDQLLEEITGVIKFVQDVVGLFGF 413

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           +   V+LSTRPEK +G+D  W+ A   +   L+++       +   +  G+GAFYGPK +
Sbjct: 414 DYE-VELSTRPEKSIGADEDWERATKALTDALESLG------LPYDINEGDGAFYGPKID 466

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
             LKDA+ R WQC T+Q DF LP RF+  Y ++  E+  PVM+HR + G++ERF+G++IE
Sbjct: 467 IKLKDALERRWQCATVQCDFTLPDRFDLVYTDADGERKRPVMLHRVILGAVERFLGVLIE 526

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +  G LP WL+P+QA +  +T +  E+A++    L    +  E D RNE + +K+RE  +
Sbjct: 527 HTAGALPTWLAPVQARILIVTDAQKEFAEQALARLLEAGIRAELDDRNEKLGFKVREAQV 586

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
           +KIP +++ GDKE     + +R          +L + + ++T +   P
Sbjct: 587 EKIPYMLVAGDKEKELGGLNVRLRSGDNLGVKTLDEVVLLITADCQEP 634


>gi|256545863|ref|ZP_05473219.1| threonine--tRNA ligase [Anaerococcus vaginalis ATCC 51170]
 gi|256398559|gb|EEU12180.1| threonine--tRNA ligase [Anaerococcus vaginalis ATCC 51170]
          Length = 641

 Score =  604 bits (1557), Expect = e-170,   Method: Composition-based stats.
 Identities = 256/646 (39%), Positives = 392/646 (60%), Gaps = 18/646 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEII 62
            IK+  PD S+K +    +  DV + IS  L + A+   +NGKV   ++P+ E S  ++I
Sbjct: 1   MIKIKLPDESVKEYENGVSVEDVTKDISEGLFRSALGAVVNGKVMGYAEPINEDSDFKVI 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
             ED     +  H+ +H+MA A++ IWP+ + AIGP IE GFYYD D E  F  ++L +I
Sbjct: 61  KFEDKEGKEIFWHTTSHLMAAAIKEIWPDAKFAIGPAIESGFYYDIDLEHRFVPEDLPKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE--WF 180
           E+KM+EI  +D   +++ +S  +A E F+ + + YKVE++E +P  E +TLY  G+  + 
Sbjct: 121 EEKMKEIAKKDLKMVRKEISRNEALEYFKKENQEYKVELIEDLPEDEIITLYEMGDNVFV 180

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLC+G H+ ST  +K   KL  +AGAYWRGDS+R ML RIYG ++  +++L +Y+   EE
Sbjct: 181 DLCKGAHLLSTKSIK-AIKLNSIAGAYWRGDSDRKMLQRIYGISFEKKKQLDEYIELQEE 239

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQV 299
           +++RDHRK+ +EM+LF   ++  G  F+   G  +   L+++    + +  Y EI TP +
Sbjct: 240 AKRRDHRKIGKEMNLFSFHDEAPGFPFFKENGMILRHELLNWWTDVLAENGYGEIQTPLI 299

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           +++ LW +SGHWD Y+ NM+  K       D   +A+KPMNCPG V V+     SYR+LP
Sbjct: 300 MNEELWHRSGHWDHYKENMYFTKI------DGENYAVKPMNCPGSVLVYGEEPHSYRDLP 353

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +RLAE+G V+R+E SG+LHGL RVR FTQDDAHV+C   Q+ +E  K+ +L   +Y  FG
Sbjct: 354 IRLAEYGQVHRHELSGALHGLFRVRTFTQDDAHVYCLPSQVKDEVFKMIDLADLLYSTFG 413

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F+  + +LSTRP+  +G    WD AE  ++  L       +  I   +   +GAFYGPK 
Sbjct: 414 FKYKI-ELSTRPDDFMGKIEEWDFAEKALEDALI------ERGIEYTINPKDGAFYGPKI 466

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           ++ L+DA  R WQCGTIQ+DF LP  F+  Y++ + EK  PVM+HRA+ GSIERFIG + 
Sbjct: 467 DFHLEDAAKRTWQCGTIQLDFQLPQNFDLTYIDENGEKKRPVMLHRALLGSIERFIGSVT 526

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E F G  PLW++P Q  +  ++    ++A ++A  +K     +E D R+E + YKIR+  
Sbjct: 527 EQFAGRFPLWINPKQVEIIPVSDKFADFADDLAKKIKKAGYRVEVDHRSEGVGYKIRQAQ 586

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           + +   +++ G+ E     + +R      T+ VS  + I  L +E 
Sbjct: 587 LMRTNYMLVVGENEEKSGKLTVRNRDGEETKDVSFEEFIEKLDEER 632


>gi|288818602|ref|YP_003432950.1| threonyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|288788002|dbj|BAI69749.1| threonyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|308752193|gb|ADO45676.1| threonyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
          Length = 637

 Score =  604 bits (1556), Expect = e-170,   Method: Composition-based stats.
 Identities = 275/646 (42%), Positives = 405/646 (62%), Gaps = 22/646 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I++   D  +          ++ +       + AV   +NGK+ DL  P+  + +I  I
Sbjct: 1   MIRVVIED-KVYEVEAGTPLGEIYQMAG---VENAVGGKVNGKIYDLQTPIREDANIVPI 56

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPE--VQVAIGPIIEDGFYYDFDKEQPF-SSDEL 119
              DP SL ++RHS AHIMA+A++ I+ +  V + +GP  E+GFYYD + E    S D+L
Sbjct: 57  YKSDPESLEILRHSLAHIMAQALKEIYGKEKVHLGVGPTTEEGFYYDVEIEGVRLSEDDL 116

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           ++IE+KM+EII R+ P L++ L  E+A +LFE  +E YK+EI++ I   + +++Y Q ++
Sbjct: 117 SKIEEKMREIIQRNYPILRRELDREEAIKLFEKLREKYKLEIIKGISPDDVISVYEQNDF 176

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPH+ +TG    F KL  ++GAYWRGDS++PML RIYG A+   +EL + L F E
Sbjct: 177 VDLCRGPHLPTTGMAGAF-KLTHISGAYWRGDSSQPMLQRIYGMAFWDSKELEERLKFYE 235

Query: 240 ESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTP 297
           E++KRDHRKL R+++ F I ED G G++ W  KG    + L  Y R + +K  Y+ + TP
Sbjct: 236 EAKKRDHRKLGRDLEFFIIDEDVGPGLVLWLPKGGIYRKILEDYWREEHLKRGYQFVYTP 295

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  LWQ SGH D YR NMF+         D   + +KPMNCP H+A++   ++SY+E
Sbjct: 296 HIGNAKLWQISGHLDYYRPNMFSSMQV-----DQEEYFVKPMNCPFHIAIYKSKVRSYKE 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP++LAE G+VYR E SG LHGLMRVRGFTQDDAH+ CT+EQ+ +   +     IS+ +D
Sbjct: 351 LPLKLAELGTVYRYEMSGVLHGLMRVRGFTQDDAHIICTEEQVEDVIHQTLEFAISMLRD 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFE+  V +ST+PE  +GS   W  AEN +K  ++++       I   +  G GAFYGP
Sbjct: 411 FGFEEFKVYISTKPEDAIGSPDQWQLAENSLKKAVESMG------IPYQIDEGGGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  +KDAIGR WQC TIQ DFNLP RF+  YV   +++  P MIHRA+ GSIERF GI
Sbjct: 465 KIDVKIKDAIGRLWQCSTIQFDFNLPERFDMEYVGPDNKRHRPYMIHRALLGSIERFTGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           ++E++ G LP+WLSP+Q  +  I  + ++Y +++ N LK   L +E D R+E ++ KIR+
Sbjct: 525 LLEHYAGALPVWLSPVQVRLIPIGEAHMDYTKKLENRLKEEGLRVEVDDRDERLSAKIRD 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             ++KIP +I+ GDKE S+  I +R         +S+ + I  +  
Sbjct: 585 AEVQKIPYVIVIGDKEVSQGKISVRSKKEGNLGSMSVEEFIKHIKD 630


>gi|225026720|ref|ZP_03715912.1| hypothetical protein EUBHAL_00972 [Eubacterium hallii DSM 3353]
 gi|224955955|gb|EEG37164.1| hypothetical protein EUBHAL_00972 [Eubacterium hallii DSM 3353]
          Length = 650

 Score =  604 bits (1556), Expect = e-170,   Method: Composition-based stats.
 Identities = 220/655 (33%), Positives = 345/655 (52%), Gaps = 20/655 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +   DGS K +    +  D+A+ IS  LA+ A A  +NG+  DL   V  +  + I+T  
Sbjct: 3   IRLKDGSEKEYAQPMSVLDIAKDISEGLARNACAGQVNGETVDLRTVVSEDSDLNILTFN 62

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D       RH+ +H++A+AV+ ++PE ++AIGP IEDGFYYDFD   P + ++L  IEK+
Sbjct: 63  DEEGKLAFRHTASHVLAQAVKRLYPEAKLAIGPAIEDGFYYDFDM-APLTREDLDAIEKE 121

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+++I  + P  +  L  E+A    + K E YKVE++E +P    ++ Y+QG++ DLC G
Sbjct: 122 MKKVIKENPPIERYELPREEAIAYMKEKDEPYKVELIEDLPEDATISFYKQGDFTDLCAG 181

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PH+ S   +K F       GAYWRG+ N  ML+RIYGTA+  + +L + L +LEE + RD
Sbjct: 182 PHLMSVKPIKAFKLTASS-GAYWRGNENNKMLTRIYGTAYTKKADLEERLKYLEEIKLRD 240

Query: 246 HRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEINTPQVLDQ 302
           H +L REM+LF      G G+     KG KI QTL  ++     +   Y    TP +   
Sbjct: 241 HNRLGREMELFTTVDVIGQGLPLLLPKGAKIIQTLQRWIEDLEDNEWGYVRTKTPLMAKS 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            L++ SGHWD Y+  MF +    D   D    AL+PM CP     + +  KSYR+LP R+
Sbjct: 301 DLYKISGHWDHYKEGMFVL---GDEENDKEVLALRPMTCPFQYYCYKNTQKSYRDLPYRM 357

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           +E  +++RNE SG +HGL RVR FT  + H+    +Q  +E     +L        G + 
Sbjct: 358 SETSTLFRNEDSGEMHGLTRVRQFTISEGHLIIRPDQTNDELKGCLHLAQYCLGVLGVQD 417

Query: 423 IMVKL-----STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
            +            EK +G D  W+  ++ ++ +L          +      GE AFYGP
Sbjct: 418 DVTYRLSKWDPNNKEKYLGDDEYWETTQDAIRNILVD------QGVPFVEAEGEAAFYGP 471

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +   K+  G++    TIQ+D  +   F+ +Y++ + +K  P +IHR   G  ER +  
Sbjct: 472 KIDIQAKNVYGKEDTMITIQLDCAIAENFDMYYIDQNGDKQRPYVIHRTSMGCYERTLAW 531

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE + G  P WL P Q  V  I+    +YA+E+   LK + +    D R+E I YKIRE
Sbjct: 532 LIEKYAGKFPTWLCPEQVRVLPISEKFADYAEEVNKELKRNGILSTVDNRSEKIGYKIRE 591

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
             ++K+P +++ G +E     + +R   +    +  L D I  + +E    + ++
Sbjct: 592 ARLQKLPYMLVVGAQEQETGKVSVRSRFAGDEGQKDLKDFISAICEEIRTKEIRQ 646


>gi|254517592|ref|ZP_05129648.1| threonyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
 gi|226911341|gb|EEH96542.1| threonyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
          Length = 645

 Score =  604 bits (1556), Expect = e-170,   Method: Composition-based stats.
 Identities = 242/649 (37%), Positives = 357/649 (55%), Gaps = 18/649 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEII 62
            IK+T  DGS+K F    +  D+A+SIS  LA+ A    +NGKV DL   V E S + I 
Sbjct: 1   MIKITLKDGSVKEFEAGISVLDIAKSISEGLARNACCGIVNGKVVDLRYIVNEDSELAIC 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +       +RHS +H++A AV+ ++P  ++AIGP I DGFYYDFD E  FSSD+L +I
Sbjct: 61  TFDSQEGKDALRHSVSHVLAYAVKRLYPNAKLAIGPAINDGFYYDFDVENSFSSDDLVKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M++I+  +    +  L   +A +L E   E YKVE++  +   E ++ Y+ G++ DL
Sbjct: 121 EDEMRKIVKENPSIERFELPRAEAIKLMEDANEPYKVELINDLGEDEVISFYKMGDFVDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPH+ S  +  K  KL++ AGAYW+GD    MLSR+YGTA+  + +L  +L  LEE++
Sbjct: 181 CAGPHLMSL-KPVKAIKLLRSAGAYWKGDEKNKMLSRVYGTAFLKKADLDAHLEALEEAK 239

Query: 243 KRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVL 300
           KRDH KL RE+ +F   E    G+     KG KI Q L  ++   + K  Y    TP + 
Sbjct: 240 KRDHNKLGRELKIFTTDEKVGQGLPLIMPKGAKIVQLLQRWVEDEEEKRGYVFTKTPSMS 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
              L++ SGHWD Y+  MF +    D  KD    AL+PM CP    ++N    SYRELP+
Sbjct: 300 KNDLFKVSGHWDHYKDGMFVL---GDEDKDPEVMALRPMTCPFQYTIYNAEQHSYRELPI 356

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R AE  ++YRNE SG +HGL+RVR FT  D H+ C  +Q+  E      LI  I    G 
Sbjct: 357 RYAETSTLYRNEASGEMHGLIRVRQFTLSDGHIVCRPDQIEEEFKGCVELINHIMSTLGI 416

Query: 421 EKIMVKL-----STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           +  +            +K + +   W++ + +MK +LD +       I+     GE AFY
Sbjct: 417 DGDISFRFSKWDPNNTDKYINNPEAWEETQVLMKAILDHLG------IDYVEAEGEAAFY 470

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +   K+  G++    TIQ+DF L  RF+  Y++    K  P +IHR+  G  ER +
Sbjct: 471 GPKLDIQFKNVHGKEDTIITIQIDFALAERFDMTYIDKDGNKKRPYIIHRSSIGCYERTL 530

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE + G  P WL+P QAIV  I+    +YA+ I    K   + I  D+R+E I YKI
Sbjct: 531 AMLIEKYAGAFPTWLAPTQAIVLPISDKYNDYAESIVKDFKDSGIRITADYRSEKIGYKI 590

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           RE  +++IP I++ G+KEA+     +R   +     + + +    L  E
Sbjct: 591 REARLERIPYILVVGEKEAANNEASVRSRKNGEEGALPVSELKNRLILE 639


>gi|312794079|ref|YP_004027002.1| threonyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii
           177R1B]
 gi|312181219|gb|ADQ41389.1| threonyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii
           177R1B]
          Length = 647

 Score =  603 bits (1555), Expect = e-170,   Method: Composition-based stats.
 Identities = 244/650 (37%), Positives = 379/650 (58%), Gaps = 21/650 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
             I +T PD  +       +  +  ++IS  L K+AVA  I+G + DL   +  + S E+
Sbjct: 2   DKIAVTLPDRKVVEAEKGISALEFIKTISMKLYKEAVACKIDGVLKDLWTSLERDCSFEV 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           +T        V  H+ +HI+A+AV+ ++ + V++ IGP I++GFYYDFD E+  + + L 
Sbjct: 62  VTFSSDEGKKVYWHTTSHILAQAVKRLFGDKVKLGIGPAIDNGFYYDFDVEESITMELLE 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IE++MQ+II  D    +  LS ++A +L + K E YKVE++  IP  E ++ YRQGE+ 
Sbjct: 122 KIEEEMQKIIKEDLKIERFELSRKEAVKLMQEKGENYKVELINDIPEGETISFYRQGEFV 181

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLC GPH+ STG+VK F KL+ VAGAYWRG+S   ML RIYG ++  + EL +YL  LEE
Sbjct: 182 DLCTGPHLPSTGRVKAF-KLLSVAGAYWRGNSKNKMLQRIYGISFEKKSELDEYLKKLEE 240

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQ 298
           ++KRDH ++ RE+++F  +E    G+     KG KI Q L  ++   + K  Y    TP 
Sbjct: 241 AKKRDHNRIGRELEIFTTSEVVGQGLPLLMPKGAKILQILQRFVEDEEEKRGYLLTKTPY 300

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L++ SGHWD YR  MF ++  ++        AL+PM CP    ++N   +SYR+L
Sbjct: 301 MAKSDLYKISGHWDHYRDGMFVIEEDEN-----EVLALRPMTCPFQFLIYNSKQRSYRDL 355

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R +E  +++RNE SG +HGL+RVR FT  DAH+ C  +Q+  E   + +LI  I K  
Sbjct: 356 PIRYSETSTLFRNESSGEMHGLIRVRQFTLSDAHIICRPDQVEEEFKGVLDLIQYIMKTL 415

Query: 419 GFEKIMVKLSTR-----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           G E  +    +R      EK + +   W+  EN MK +LD +       IN     GE A
Sbjct: 416 GIENDIWYRFSRWDPNNKEKYIDNPEAWEKTENDMKNILDKLG------INYKEAKGEAA 469

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +   K+  G++    T+Q+DF L  RF+  YV+   +K  P++IHR+  G  ER
Sbjct: 470 FYGPKLDIQFKNVYGKEDTIITVQIDFALAERFDMTYVDRDGQKKRPIIIHRSSIGCYER 529

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
            + ++IE + G  PLWLSP+Q  V  ++ +  EYA+ +A +LK +   +E D+R+ET+ Y
Sbjct: 530 TLAMLIEKYNGAFPLWLSPVQIRVIPVSDNFNEYAKNVARILKENGFRVEEDYRSETVGY 589

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           KIR+  ++KIP ++I G+KE  E ++ +R          ++ D I ++ +
Sbjct: 590 KIRDAQLQKIPYMVIVGEKEQKENTVAVRDRKKGDLGSFTIEDFIAMVKE 639


>gi|50555740|ref|XP_505278.1| YALI0F11231p [Yarrowia lipolytica]
 gi|49651148|emb|CAG78085.1| YALI0F11231p [Yarrowia lipolytica]
          Length = 755

 Score =  603 bits (1555), Expect = e-170,   Method: Composition-based stats.
 Identities = 236/662 (35%), Positives = 360/662 (54%), Gaps = 38/662 (5%)

Query: 3   SDIKLTFPDGSIKN-FPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIE 60
             I +T  DG+ K       +  D+ ++IS+SL  + V   +NG++ D+  P+  +  +E
Sbjct: 97  KPIVVTLKDGTPKEATAWETSPMDICKTISKSLPDQTVIAKVNGELWDMERPLEGDAKLE 156

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFS---SD 117
            +         V  HS AH++ EA +  +    + IGP  EDGF+Y+   +   +   + 
Sbjct: 157 FLDFNSDEGKRVFWHSSAHVLGEATERHY-GAHLCIGPPTEDGFFYEMSIDNGDTHVQAC 215

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES-IPAKENVTLYRQ 176
           +   +E   +  I     F +  LS E   ++       YKVE+++  IP   + T+YR 
Sbjct: 216 DYDPLETVAKSAIKDKQKFERLVLSKENLLKM--FAYNKYKVELIQKKIPDGTSTTVYRC 273

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           G   DLC GPH+  TG++K F KL+K + +Y+ GD +   L RI+G ++  ++ +T++L 
Sbjct: 274 GPLIDLCVGPHIPHTGKIKAF-KLLKNSSSYFLGDKDNDSLQRIFGISFPDKKLMTEHLK 332

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEIN 295
           FLEE+ KRDHRK+ RE +LF   +   G  FW   G +I+  L   +R++ +   YEE+ 
Sbjct: 333 FLEEAAKRDHRKIGREQELFLFNDMSPGSCFWLPHGARIYSALTDLLRKEYRKRGYEEVI 392

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP + +  LW+ SGHW +Y+ +MF  +       +   F LKPMNCPGH  +F    +SY
Sbjct: 393 TPNMYNSKLWETSGHWQNYKDDMFTFEI------EKEKFGLKPMNCPGHCLMFKARDRSY 446

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           +ELP R+A+FG ++RNE SG+L GL RVR F QDDAH+FC   Q+ +E   I + +  IY
Sbjct: 447 KELPWRVADFGVIHRNEASGALTGLTRVRRFQQDDAHIFCMPSQIQSEITGIFDFLKKIY 506

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
             FGFE  M KLSTRP+K VG    W+DAE  ++  L+      +   N  +  G+GAFY
Sbjct: 507 TIFGFEFKM-KLSTRPDKYVGEIETWNDAEKQLEEALN------KWGANWELNPGDGAFY 559

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC----------HPVMIHR 525
           GPK + ++ DA+ R  QC TIQ+DF LP+RF+  + NS +              PVMIHR
Sbjct: 560 GPKIDIVISDALHRWHQCATIQLDFQLPNRFDLNFKNSAAMGEGEADSAALYTRPVMIHR 619

Query: 526 AVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD 585
           A++GS ER   I+ E+F G  P WLSP Q +V  +     +YAQE+ + L       + D
Sbjct: 620 AIYGSFERMTAILCEHFAGKWPFWLSPRQVLVIPVGPKYNDYAQEVRDELVDAGFFADVD 679

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ----KVSLLDAIPIL 641
               T+  K+RE  +K+     I G++E + +S+ IR     + Q     + L + I  L
Sbjct: 680 NGPNTLQKKVREAQLKQYNFTFIVGEEEKTAKSVNIRDRDDQSKQAKAASIPLDEVISRL 739

Query: 642 TK 643
            K
Sbjct: 740 HK 741


>gi|266623074|ref|ZP_06116009.1| threonine--tRNA ligase [Clostridium hathewayi DSM 13479]
 gi|288865169|gb|EFC97467.1| threonine--tRNA ligase [Clostridium hathewayi DSM 13479]
          Length = 691

 Score =  603 bits (1555), Expect = e-170,   Method: Composition-based stats.
 Identities = 235/656 (35%), Positives = 360/656 (54%), Gaps = 19/656 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
           ++K+T  DGS+K +    +  D+A  IS  LA+ A A  ++G+V DL   V R+  + I+
Sbjct: 42  EMKITLKDGSVKEYDQAVSVYDIAADISEGLARNACAGEVDGRVVDLRTMVDRDCCLNIL 101

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T  DP  LA  RH+ +H++A+AV+ ++PE ++AIGP IE+GFYYDF+    FS ++L +I
Sbjct: 102 TVHDPAGLAAYRHTTSHVLAQAVKHLYPEAKLAIGPSIENGFYYDFETP-SFSREDLDKI 160

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M++II       +  L   +A +  E K E YKVE++  +P    ++ YRQG++ DL
Sbjct: 161 EAEMKKIIKAGEKLERFTLPRAEAVKFMEEKGEPYKVELIRDLPEDAEISFYRQGDFTDL 220

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPH+ ST  +K F KL   +GAYWRG     ML+R+YGT++  ++EL +YL +L   +
Sbjct: 221 CAGPHLMSTKPIKAF-KLTSSSGAYWRGSEKNAMLTRVYGTSFAKKEELNEYLEYLANIK 279

Query: 243 KRDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVL 300
            RDH KL RE++LF  +   G G+     KG KI QTL  ++   + K  Y    TP + 
Sbjct: 280 NRDHNKLGRELELFATVDVIGQGLPLLMPKGAKIIQTLQRWIEDEEEKRGYMRTKTPLMA 339

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            + L+  S HWD Y+  MF +    D  KD   FAL+PM CP    V+    KSYR+LP 
Sbjct: 340 KKDLYVISDHWDHYKEGMFVL---GDEEKDDEVFALRPMTCPFQYYVYKQSPKSYRDLPC 396

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R  E  +++RNE SG +HGL RVR FT  + H+    +Q+  E     +L        G 
Sbjct: 397 RYGETSTLFRNEDSGEMHGLTRVRQFTISEGHLVVRPDQLEEEFKGCVDLAKYCLTTLGL 456

Query: 421 EKIMVKLS-----TRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           E+ +          + +  +G+  +WD+ E  M+ +LD I       I     +GE AFY
Sbjct: 457 EEDVTYRMSKWDPEKADHYLGNAEMWDEVEAAMRKILDDIG------IEYTEEVGEAAFY 510

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +   K+  G++    TIQ+D  L  RF+  +V+    K  P +IHR   G  ER +
Sbjct: 511 GPKLDIQAKNVYGKEDTMITIQLDMFLAERFDMSFVDKDGTKKRPYIIHRTSMGCYERTL 570

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
             +IE ++G  P WL P Q  V  I+    +YA+++ + LKS+ +    D R E I YKI
Sbjct: 571 AWLIEKYEGAFPTWLCPEQVRVLPISEKYHDYAEKVESELKSNGILATVDERAEKIGYKI 630

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           RE  + K+P +++ G KE  +  + +R   +    + SL D I  +++E    + +
Sbjct: 631 REARLAKLPYMLVVGQKEEEDGLVSVRSRFNGDEGQKSLSDFIDAISREIRTKEIK 686


>gi|160935092|ref|ZP_02082478.1| hypothetical protein CLOLEP_03968 [Clostridium leptum DSM 753]
 gi|156866545|gb|EDO59917.1| hypothetical protein CLOLEP_03968 [Clostridium leptum DSM 753]
          Length = 660

 Score =  603 bits (1555), Expect = e-170,   Method: Composition-based stats.
 Identities = 231/651 (35%), Positives = 357/651 (54%), Gaps = 19/651 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEI 61
           + +K+T   G++K +  + T +++A+S+   L K A A  +NG+V DL  PV E S +E+
Sbjct: 14  TMVKVTLKGGAVKEYDDNVTVAEIAKSLGGGLYKAACAGKLNGRVVDLRTPVTEDSEVEL 73

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +T +         H+ +HIMA+AV  ++P+   AIGP I+ GFYYDFD  +  + D+L  
Sbjct: 74  LTFDSQEGKRAYWHTTSHIMAQAVGRLFPDAVFAIGPSIDQGFYYDFDLPRNLTPDDLTA 133

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPA-KENVTLYRQGEWF 180
           IE +M++II  D P  +  L  E+A +L + K + YKVE+++      E ++ YRQG++ 
Sbjct: 134 IESEMKKIIKEDEPLERFELEPEEAVKLMKEKGQPYKVELIQEHSGKGEKISFYRQGDFV 193

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLC GPH+ STG+VK   KL    GAYWRGDS   ML R+YG ++    ELT +L  +EE
Sbjct: 194 DLCAGPHLMSTGKVK-AVKLTSCTGAYWRGDSKSKMLQRVYGISFPKASELTAHLEAMEE 252

Query: 241 SEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQ 298
           ++KRDH KL RE+  F      G G+      G ++ Q L  ++   + K  +    TP 
Sbjct: 253 AKKRDHNKLGRELGYFTTCDIIGQGLPILLPNGARVIQLLQRFVEDEEQKRGWLLTKTPY 312

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L++ SGHWD Y+  MF +    D  KD   FAL+PM CP     + +  +SYR+L
Sbjct: 313 MAKSDLYKLSGHWDHYKDGMFVL---GDEEKDDEVFALRPMTCPFQYQAYLNKKRSYRDL 369

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R  E  +++RNE SG +HGL+RVR FT  + H+ C  +Q+  E      L   + +  
Sbjct: 370 PLRYNETSTLFRNEASGEMHGLIRVRQFTISEGHLMCRPDQLEEEFKSCLQLANYMLETL 429

Query: 419 GFEKIMVKL-----STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           G  + +            +K +G+   WD+A++ MK +LD +       I   + +GE A
Sbjct: 430 GLAEDVSYRFSQWDPEDKDKYIGTPEQWDEAQSAMKRILDHLG------IEYAIGVGEAA 483

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  +K+  G++    TIQ+D  L  +F   YV++  +  +P +IHR   G  ER
Sbjct: 484 FYGPKLDIQIKNVFGKEDTLITIQIDQLLAEKFGMEYVDADGKAKNPYIIHRTSIGCYER 543

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
            + ++IE + G LP+WL P Q  V  I+   ++ A E+   LK+  +    D RNE I Y
Sbjct: 544 TLALLIEKYAGALPMWLMPEQVRVLPISEKFLDKALEVDRELKAQGIRSTADSRNEKIGY 603

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIRE  ++KIP ++I G+KE  E  + +R         +SL   +     E
Sbjct: 604 KIREAQMEKIPYMLIIGEKEVQENVVSVRSRKDGVLGSMSLETFLEKALTE 654


>gi|32477337|ref|NP_870331.1| threonyl-tRNA synthetase [Rhodopirellula baltica SH 1]
 gi|32447888|emb|CAD77406.1| threonyl-tRNA synthetase [Rhodopirellula baltica SH 1]
          Length = 830

 Score =  603 bits (1555), Expect = e-170,   Method: Composition-based stats.
 Identities = 254/708 (35%), Positives = 381/708 (53%), Gaps = 74/708 (10%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS----- 58
           ++++  PDGS+K  P  AT  DVA+ IS  LA+  VA  ++G + D   P+ E +     
Sbjct: 103 EVQVRLPDGSLKTQPADATAMDVAKEISEGLARSVVAAEVDGTIVDSFRPLGEIADDENV 162

Query: 59  --IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSS 116
             + ++T  D  +L V+RHS AH+MA A+  I+  V +A GP    GFYYDFD  +  S 
Sbjct: 163 VPLRLLTTRDESALDVLRHSAAHVMARAIMRIYKGVSLAFGPTTSGGFYYDFDMPEKISE 222

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES-IPAKENVTLYR 175
           D+  +IE ++++II    PF +  L  ++AR+L +   +  KVE +E+ +  +  V+ YR
Sbjct: 223 DDFPKIEAEIKKIIKAKEPFERFVLERDEARKLCDDLDQDLKVEHIETGLGDQATVSFYR 282

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
           QGE+ DLCRGPH+   G +K   KL+ VAGAYW+GD++   L R+YGTA+  ++EL  YL
Sbjct: 283 QGEFVDLCRGPHIPHAGMIK-AIKLLSVAGAYWKGDASGRQLQRVYGTAFFDKKELASYL 341

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRRKI-KDDYEE 293
             +EE+++RDHR L ++  LF I  +   G+  W  KG ++  TL  ++RR++    Y+ 
Sbjct: 342 EQIEEAKRRDHRVLGKQHGLFAINPEVGQGLCLWLPKGARVRVTLEDFLRRELLSRGYDP 401

Query: 294 INTPQVLDQHLWQQSGHWDSYRA------------------------------------- 316
           + +P +    +++ SGH+  YR                                      
Sbjct: 402 VYSPHIGRVEMYETSGHFPYYRDSQFAPLFGSEVGGLLDAWSTRLDKDDLSKDDEDKLIA 461

Query: 317 --NMFAVKCADDTIK---------------DLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
              +F VK  D                   +   + LKPMNCP H  +F    +SYR+LP
Sbjct: 462 AAEVFGVKLPDYKPSASNDAKKDVLHRWQLNHERYLLKPMNCPHHCQIFGAQPRSYRQLP 521

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +RL EFG+VYR+E +G L+G+MRVRG TQDDAH+FCT +Q+  E      L   + +  G
Sbjct: 522 LRLFEFGTVYRHEQTGELNGMMRVRGLTQDDAHIFCTADQVEEEFRATIELTKFVLESVG 581

Query: 420 FEKIMVKLSTRPEK---RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
            +   V+LS R       VGS+  WD AE  ++GVL+      Q  ++     GE AFYG
Sbjct: 582 LDDYRVQLSLRDPDSSKYVGSEENWDHAEGALRGVLE------QSGLSFNEEPGEAAFYG 635

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK +++++D IGR WQ GT+Q+D+NLP RF   Y  + +    PVMIHRA FGS+ERF G
Sbjct: 636 PKADFMVRDCIGRSWQLGTVQLDYNLPERFKLEYKGNDNATHRPVMIHRAPFGSLERFTG 695

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           ++IE+F G  P+WLSP Q  V  ++  +VEYA  +A  L      +  D  +  +  KIR
Sbjct: 696 MLIEHFAGAFPMWLSPEQIRVLPLSDKSVEYATAVAKQLDEAGFKVTVDASDGKVQAKIR 755

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
              I  +  + + G KEA    + +R         + + +AI  L KE
Sbjct: 756 NAQIDLVNYMAVVGPKEAESGQVALRDRIEGDLGSMPIKEAIARLQKE 803


>gi|114659235|ref|XP_001144545.1| PREDICTED: probable threonyl-tRNA synthetase 2, cytoplasmic isoform
           2 [Pan troglodytes]
          Length = 802

 Score =  603 bits (1554), Expect = e-170,   Method: Composition-based stats.
 Identities = 239/648 (36%), Positives = 358/648 (55%), Gaps = 23/648 (3%)

Query: 2   PSDIKLTFPDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
            + I +   DG          T   VA  IS+ LA+  V   +NG++ DL  P+  + S+
Sbjct: 159 SNIITVRVADGQTVQGEVWKTTPYQVAAEISQELAESTVIAKVNGELWDLDRPLEGDSSL 218

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDE 118
           E++T ++  + AV  HS AHI+ EA++  +    +  G  IE+GFYYD F +++  SS E
Sbjct: 219 ELLTFDNEEAQAVYWHSSAHILGEAMELYYGGH-LCYGLPIENGFYYDVFIEDRAVSSTE 277

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L+ +E   + II    PF +  +S E   E+F+     +K  IL         T+YR G 
Sbjct: 278 LSALENICKAIIKEKQPFERLEVSKEILLEMFKY--NKFKCRILNEKVNTATTTVYRCGP 335

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLC+GPHVR TG++K   K+ K +  YW G+     L RIYG ++   + +  +  F 
Sbjct: 336 LIDLCKGPHVRHTGKIKTI-KIFKNSSTYWEGNPEMETLQRIYGISFPDNKMMRDWEKFQ 394

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
           EE++ RDHRK+ +E +LF   +   G  F+  +G  I+ TL  ++R +    D+ E+ +P
Sbjct: 395 EEAKNRDHRKIGKEQELFFFHDLSPGSCFFLPRGAFIYNTLTDFIREEYHKRDFTEVLSP 454

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  LW+ SGHW  Y  NMF  +   DT      FALKPMNCPGH  +F H  +S+RE
Sbjct: 455 NMYNSKLWEASGHWQHYSENMFTFEIEKDT------FALKPMNCPGHCLMFAHRPRSWRE 508

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           +P+R A+FG ++RNE SG+L GL RVR F QDDAH+FCT EQ+  E       + S+Y  
Sbjct: 509 MPIRFADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCTVEQIEEEIKGCLRFLQSVYST 568

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF   +  LSTRPE  +G   +W++AE  ++  L       +      +  G+GAFYGP
Sbjct: 569 FGFSFQLN-LSTRPENFLGEIEMWNEAEKQLQNSLMDFGEPWK------MNPGDGAFYGP 621

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIG 536
           K +  +KDAIGR  QC TIQ+DF LP RFN  YV+    +K  PV+IHRA+ GS+ER I 
Sbjct: 622 KIDIKIKDAIGRYHQCATIQLDFQLPIRFNLTYVSKDGDDKKRPVIIHRAILGSVERMIA 681

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FRNETINYKI 595
           I+ EN+ G  P WLSP Q +V  +  +  +YA ++++         + D   N T+N KI
Sbjct: 682 ILSENYGGKWPFWLSPRQVMVIPVGPTCEKYALQVSSEFFEEGFMADVDLDHNCTLNKKI 741

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           R   + +   I++ G+KE  + ++ +R   +    ++ +  AI  L  
Sbjct: 742 RNAQLAQYNFILVVGEKEKIDNAVNVRTRDNKIHGEILVTSAIDKLKN 789


>gi|260940036|ref|XP_002614318.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
 gi|238852212|gb|EEQ41676.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
          Length = 722

 Score =  603 bits (1554), Expect = e-170,   Method: Composition-based stats.
 Identities = 254/662 (38%), Positives = 375/662 (56%), Gaps = 31/662 (4%)

Query: 5   IKLTFPDGSIKN-FPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           IK+T  DGS+K       +  D+A SI +S A++ V   ++G++ DL  P+  +  +E +
Sbjct: 71  IKITLKDGSVKEGTAYETSPWDIASSIGKSFAERQVISKVDGELWDLERPLEGDAVLEFL 130

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF---DKEQPFSSDEL 119
             E P   AV  HS AH++ EA +  +    ++ GP  EDGF+YD    D E   S D+ 
Sbjct: 131 DFEHPEGKAVFWHSSAHVLGEACECHY-GCHLSYGPPTEDGFFYDMSINDGEGVVSQDDF 189

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEK   +II     F++  ++ E+  ++FE  K   K  I E +P   + T+YR G  
Sbjct: 190 GTIEKVSTKIIKEKQKFVRLEMTKEELLKMFEYNKYKVKF-ISEKVPDGTSTTVYRCGPL 248

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPH+  TG++K F K++K + +Y+ GDSN   L R+YG ++  ++ + ++L FL+
Sbjct: 249 IDLCRGPHILHTGKIKAF-KVLKNSSSYFLGDSNNDSLQRVYGISFPDKKLMDEHLKFLK 307

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+ +RDHRK+ +E +LF+  E   G  FW   G +I+ TL+  +R +  +  YEE+ TP 
Sbjct: 308 EASERDHRKIGKEQELFYFNEVSPGSAFWLPHGTRIYNTLVDMLREEYRQRGYEEVITPN 367

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           + +  LW+ SGHW +Y+ NMF+ +   DT      F LKPMNCPGH  +F    +SYREL
Sbjct: 368 MYNTKLWEISGHWGNYKENMFSFEVEKDT------FGLKPMNCPGHCVLFKSRERSYREL 421

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P R+A+FG V+RNE SG+L GL RVR F QDDAH+FC ++Q+  E   + + +  +Y  F
Sbjct: 422 PWRVADFGVVHRNEFSGALSGLTRVRRFQQDDAHIFCEQDQIEQEIAGVFDFLQKVYGTF 481

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE  M +LSTRPEK VG    W+ AE  ++  L+      +  +N     G+GAFYGPK
Sbjct: 482 GFEFKM-ELSTRPEKYVGDLETWNGAEKNLENALNKFMGEGKWELN----PGDGAFYGPK 536

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC----HPVMIHRAVFGSIERF 534
            +  + DA+ R +QC TIQ+DF +P RF   Y    + K      PVMIHRA+ GS+ER 
Sbjct: 537 IDIKISDALRRWFQCATIQLDFQMPQRFELEYKRDSNSKENSMARPVMIHRAILGSVERM 596

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLL-KSHHLSIETDFRNETINY 593
             I+ E++KG  P WLSP Q +V  +     EYA+++ + L K H    + D    T+  
Sbjct: 597 TAILTEHYKGKWPFWLSPRQILVVPVGVKYFEYAEQLKDELVKKHKFYADVDLSGNTLQK 656

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ----KVSLLDAIPILT--KESLP 647
           K+R   + K   I I G++E +E S+ IR       Q     V   + +  LT  KE L 
Sbjct: 657 KVRNGQMLKYNFIFIVGEQEQAEHSVNIRNRDIQEEQGKNATVKFEEVVAQLTKLKEELR 716

Query: 648 PD 649
            D
Sbjct: 717 SD 718


>gi|299745880|ref|XP_001841372.2| tars protein [Coprinopsis cinerea okayama7#130]
 gi|298406796|gb|EAU80442.2| tars protein [Coprinopsis cinerea okayama7#130]
          Length = 720

 Score =  602 bits (1553), Expect = e-170,   Method: Composition-based stats.
 Identities = 245/656 (37%), Positives = 371/656 (56%), Gaps = 29/656 (4%)

Query: 3   SDIKLTFPDGSIK-NFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIE 60
            +I +T PDGS +       +  DVA+ +S+SL++K V   ++ ++ DL  P+ +   +E
Sbjct: 74  EEITVTLPDGSERKATSWDTSPMDVAKEVSKSLSEKVVIAKVDDELWDLERPLEKSCKLE 133

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDEL 119
           ++  + P    V  HS AH++ EA +  +    + +GP  +DGF+Y+    ++  ++ + 
Sbjct: 134 LLDFDHPEGKKVFWHSSAHVLGEAAERHY-GCHLCLGPPTDDGFFYEMAINDRVVTNADY 192

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE-SIPAKENVTLYRQGE 178
             +EK  +  +     F +  +S EK  E+       YK  ++E  +P   + T+YR G 
Sbjct: 193 PALEKISESAVKEKQKFERLVVSKEKLLEM--FHYNKYKKYLIETKVPDGTSTTVYRCGP 250

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLC GPH+  TG++K F    K + +Y+ GDSN   L RIYG ++  +++L++Y  FL
Sbjct: 251 MIDLCVGPHIPHTGKIKAFMVT-KNSSSYFLGDSNNDTLQRIYGISFPDKKQLSEYKKFL 309

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
           EE+ KRDHRK+ RE +L+   +   G  FW   G +I+ TL+  MR +  K  Y+E+ +P
Sbjct: 310 EEAAKRDHRKIGREQELWFFNDLSPGSCFWLPHGTRIYNTLVELMREEYFKRGYQEVISP 369

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  LW+ SGHW +Y+ +MF +        +   +ALKPMNCPGH  +F+   +SY+E
Sbjct: 370 NMYNSKLWETSGHWQNYKEDMFTLDV------EKEKWALKPMNCPGHCLIFDSRDRSYKE 423

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFG ++RNE SG+L GL RVR F QDD HVFC   Q+ +E   + + +  IY  
Sbjct: 424 LPIRMAEFGIIHRNEASGALTGLTRVRRFVQDDTHVFCMPSQLEDEISALFDFMRHIYGL 483

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFE  + +LSTRPE  +G    W+ AE+ +K  L+      Q  +N     G+GAFYGP
Sbjct: 484 FGFEFHL-ELSTRPENFLGEIETWNQAEDQLKQALEK-HYPGQWELN----PGDGAFYGP 537

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH-SEKCHPVMIHRAVFGSIERFIG 536
           K +  ++DA+ R +QC TIQ+DF LP RFN  Y ++  SE   PV+IHRA+ GS+ERF+ 
Sbjct: 538 KIDITIRDALKRSFQCATIQLDFQLPERFNLKYRSADESELTRPVIIHRAILGSLERFVA 597

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           I+ E+F G  P WLSP Q +V  + +   EYA EIAN L S  L  + D    T+  KIR
Sbjct: 598 IVTEHFAGKWPFWLSPRQILVIPVAAPYKEYAAEIANRLTSLGLYADVDNGENTLPKKIR 657

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTT----QKVSLLDAIPI---LTKES 645
              I +   I++ G +E   RS+ +R      T    Q V L   I     L KE 
Sbjct: 658 NGEIAQYNFILVVGQEELDARSVNVRNRDDVGTKAKGQMVPLETVIEQFVSLKKER 713


>gi|114659237|ref|XP_510628.2| PREDICTED: threonyl-tRNA synthetase-like 2 [Pan troglodytes]
          Length = 801

 Score =  602 bits (1553), Expect = e-170,   Method: Composition-based stats.
 Identities = 238/647 (36%), Positives = 356/647 (55%), Gaps = 22/647 (3%)

Query: 2   PSDIKLTFPDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
            + I +   DG          T   VA  IS+ LA+  V   +NG++ DL  P+  + S+
Sbjct: 159 SNIITVRVADGQTVQGEVWKTTPYQVAAEISQELAESTVIAKVNGELWDLDRPLEGDSSL 218

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDE 118
           E++T ++  + AV  HS AHI+ EA++  +    +  G  IE+GFYYD F +++  SS E
Sbjct: 219 ELLTFDNEEAQAVYWHSSAHILGEAMELYYGGH-LCYGLPIENGFYYDVFIEDRAVSSTE 277

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L+ +E   + II    PF +  +S E   E+F+     +K  IL         T+YR G 
Sbjct: 278 LSALENICKAIIKEKQPFERLEVSKEILLEMFKY--NKFKCRILNEKVNTATTTVYRCGP 335

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLC+GPHVR TG++K   K+ K +  YW G+     L RIYG ++   + +  +  F 
Sbjct: 336 LIDLCKGPHVRHTGKIKTI-KIFKNSSTYWEGNPEMETLQRIYGISFPDNKMMRDWEKFQ 394

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
           EE++ RDHRK+ +E +LF   +   G  F+  +G  I+ TL  ++R +    D+ E+ +P
Sbjct: 395 EEAKNRDHRKIGKEQELFFFHDLSPGSCFFLPRGAFIYNTLTDFIREEYHKRDFTEVLSP 454

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  LW+ SGHW  Y  NMF  +   DT      FALKPMNCPGH  +F H  +S+RE
Sbjct: 455 NMYNSKLWEASGHWQHYSENMFTFEIEKDT------FALKPMNCPGHCLMFAHRPRSWRE 508

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           +P+R A+FG ++RNE SG+L GL RVR F QDDAH+FCT EQ+  E       + S+Y  
Sbjct: 509 MPIRFADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCTVEQIEEEIKGCLRFLQSVYST 568

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF   +  LSTRPE  +G   +W++AE  ++  L       +      +  G+GAFYGP
Sbjct: 569 FGFSFQLN-LSTRPENFLGEIEMWNEAEKQLQNSLMDFGEPWK------MNPGDGAFYGP 621

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  +KDAIGR  QC TIQ+DF LP RFN  Y+N       PV+IHRA+ GS+ER I I
Sbjct: 622 KIDIKIKDAIGRYHQCATIQLDFQLPIRFNLTYMNKVGILGRPVIIHRAILGSVERMIAI 681

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FRNETINYKIR 596
           + EN+ G  P WLSP Q +V  +  +  +YA ++++         + D   N T+N KIR
Sbjct: 682 LSENYGGKWPFWLSPRQVMVIPVGPTCEKYALQVSSEFFEEGFMADVDLDHNCTLNKKIR 741

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              + +   I++ G+KE  + ++ +R   +    ++ +  AI  L  
Sbjct: 742 NAQLAQYNFILVVGEKEKIDNAVNVRTRDNKIHGEILVTSAIDKLKN 788


>gi|145348874|ref|XP_001418868.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144579098|gb|ABO97161.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 674

 Score =  602 bits (1552), Expect = e-170,   Method: Composition-based stats.
 Identities = 220/643 (34%), Positives = 356/643 (55%), Gaps = 21/643 (3%)

Query: 5   IKLTFPDGSIKNFPV-HATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           IK+T PDG+ K+      T  D+A  I + LA+ A+   ++G+  D+  P+  + ++ + 
Sbjct: 48  IKVTLPDGAQKDGTRFATTPFDIALGIHKKLAQSALVAKVDGEFWDMRRPLEGDCALALF 107

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
           T +D        HS AH++ EA++  +    + IGP IE+GFYYD    E+  + ++   
Sbjct: 108 TFDDEEGKECYWHSSAHVLGEALELEY-GADLTIGPAIEEGFYYDCYLGERTLTPEDTEI 166

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           I+ +M++II     F +  +S  +A E+FE     +K+E++ ++P    ++ YR G   D
Sbjct: 167 IKGRMEKIIKEKQEFQRIVVSRAEALEMFEE--NKFKIELISNLPEDATISCYRCGPMVD 224

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+  T  +K        + A+WR D  +  L R+Y   + + + + +Y   +EE+
Sbjct: 225 LCRGPHLPDTAWLKSVSVNQ-CSRAHWRADVTKDPLVRVYAVTFPSDKLMKEYTTRIEEA 283

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
           +KRDHR +    +LF       G  F+ + G +I+  L+ ++R K  + +Y+E+ TP + 
Sbjct: 284 KKRDHRTIGLNQELFFFHHLSPGSCFFQKHGARIYNNLVQFIREKYWEYEYDEVITPNIY 343

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  LW+ SGH   Y+ NMF+         +   F LKPMNCPGH  +F H  ++YRELP+
Sbjct: 344 NFDLWKTSGHAAHYKENMFSFNV------EKEEFGLKPMNCPGHCVMFAHRHRTYRELPM 397

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+A+FG ++RNE SG+LHGL RVR F QDDAH+FC ++QM  E       +  +Y+ FG 
Sbjct: 398 RVADFGVLHRNEFSGALHGLTRVRRFQQDDAHIFCREDQMEQELSGFLQFLDDVYEVFGL 457

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
              M KLSTRPE  +G   +WD AE  +K  LD      +      +  G+GAFYGPK +
Sbjct: 458 TYEM-KLSTRPEGYLGELEVWDKAEAALKSALDRSGREWK------LNEGDGAFYGPKID 510

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
             + DA+ R +QC T+Q+DF LP RF+  YV+ ++    P++IHRA+ GS+ER   I+ E
Sbjct: 511 ITVFDALKRRFQCATVQLDFQLPIRFDLSYVDENNSSVRPIIIHRAILGSVERMFAILTE 570

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +F G  P WLSP Q ++  I+ ++ +Y  E+   L+      E D  +  +  K+RE  +
Sbjct: 571 HFAGKWPYWLSPKQVMIVPISEASRDYCYEVKRQLRKAGHFAEVDVTDRKMQKKVREAQL 630

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +   I++CG+ E +  ++ +R   +     +    AI    K
Sbjct: 631 DQFNYILVCGESEKANETVNVRTRDNKVHVIIRGETAITRFRK 673


>gi|226226691|ref|YP_002760797.1| threonyl-tRNA synthetase [Gemmatimonas aurantiaca T-27]
 gi|226089882|dbj|BAH38327.1| threonyl-tRNA synthetase [Gemmatimonas aurantiaca T-27]
          Length = 660

 Score =  602 bits (1552), Expect = e-170,   Method: Composition-based stats.
 Identities = 272/650 (41%), Positives = 397/650 (61%), Gaps = 19/650 (2%)

Query: 1   MPSD---IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE- 56
           MP+D   I LT PDGS +  P      DV  SI   L + +VAVA++G+V DL  P+R+ 
Sbjct: 1   MPADNALIVLTLPDGSTREVPTGTLARDVVGSIGTRLLQASVAVAVDGEVQDLMTPLRKS 60

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSS 116
           G+  +IT +DPR+LAV+RHS AHI+A AV+ + P+ ++  GP I+DGFYYDF+ E+PF+ 
Sbjct: 61  GAFVVITDKDPRALAVLRHSGAHILATAVRRLRPDAKIGFGPAIDDGFYYDFEVEKPFTP 120

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPA-KENVTLYR 175
           ++LA  E +M+++ A   PF++  +S E+A+ L     +  K+E L       E ++ Y 
Sbjct: 121 EDLAAFEAEMKKVAAEKYPFVRAEVSVEEAKGL--FVDDPLKLERLADFEGTDEVISTYT 178

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
            G + DLCRGPHV  T  +K F KL+  AGAYWRGD  R ML RIY TA+  + EL Q+L
Sbjct: 179 DGPFIDLCRGPHVPDTSHLKHF-KLLHTAGAYWRGDVKRQMLQRIYATAFFKKDELEQHL 237

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEIN 295
           + LEE++KRDHR L + + LF I     G  FW  KG  ++ TL  ++R + ++ ++EI 
Sbjct: 238 HNLEEAKKRDHRVLGKALGLFQIFPQAPGAAFWTPKGTTLYNTLEGFVRERQQEAFQEIK 297

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP + ++ LW+QSGHW  Y+ NMF V   +    D    +LKPMNCP H  +F     SY
Sbjct: 298 TPLLYNKKLWEQSGHWGKYKENMFLVLDNETGEHD---MSLKPMNCPSHHVLFASEKHSY 354

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           R++PVR   F  ++RNE SG+L GL RVR F+QDD HV+  ++Q+ +E   + + I+S Y
Sbjct: 355 RQMPVRFVTFDVLHRNELSGALSGLTRVRQFSQDDCHVYLREDQIESEVKFLMDFILSYY 414

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
             FG +  + K +TRPE+R+GSD LWD AE  +K  L++   S        +  G+GAFY
Sbjct: 415 DTFGLKANL-KFATRPEQRIGSDELWDRAEAALKAALESTGRS------YEMKEGDGAFY 467

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++ + D+IGR WQ GTIQ+D+N P RF   Y    +    PV+IHRAV GS ERFI
Sbjct: 468 GPKIDFDVTDSIGRAWQLGTIQLDYNAPERFELAYTGEDNAPHRPVVIHRAVSGSFERFI 527

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            I+IE+F G  P+WL+P Q  V  I      + Q + + +K+  +    D RNET+NY++
Sbjct: 528 AILIEHFAGAFPVWLAPEQVRVIPIAIDFNAHGQALVDRMKAAGIRATLDARNETLNYRV 587

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFG-STTTQKVSLLDAIPILTKE 644
           RE  ++K+P + + G +E+ E ++ +R  G     + +S    +  L  E
Sbjct: 588 REGEVEKVPYMCVIGRRESEENTVALRTRGAGKKQEILSADAFLARLQDE 637


>gi|160946146|ref|ZP_02093357.1| hypothetical protein PEPMIC_00108 [Parvimonas micra ATCC 33270]
 gi|158447669|gb|EDP24664.1| hypothetical protein PEPMIC_00108 [Parvimonas micra ATCC 33270]
          Length = 648

 Score =  602 bits (1552), Expect = e-170,   Method: Composition-based stats.
 Identities = 225/651 (34%), Positives = 367/651 (56%), Gaps = 20/651 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVC-DLSDPV-REGSIE 60
             IK+TFPDGS+  F       DVA SIS   A+  +   +N  +   LS+ +  + +++
Sbjct: 2   EMIKVTFPDGSVHEFEKGVKILDVAISISEGFARNVIGAVVNDDIIKGLSETLKEDCTVK 61

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            +  ED     +  H+ +H+MA A+Q ++P+ +  IGP IE+GFYYD D E  F+ ++L 
Sbjct: 62  FVKFEDKEGKEIFWHTSSHVMALAIQRLFPDTKFGIGPAIENGFYYDLDSEHKFTPEDLE 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IE +M++I+       ++ +  + A + F  K + YK++++E       ++ Y  GE+ 
Sbjct: 122 KIEAEMKKIVKEGYSVDRKEVDRDFALKYFAEKGQDYKIDLIEGFDKDAELSFYELGEFT 181

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+    ++K   KL+ +AGAYWRG     ML RIYG  +  +++L +YL FLE+
Sbjct: 182 DLCRGPHLVDVKKIK-AVKLLSIAGAYWRGSEKNKMLQRIYGITFEKKKDLDEYLEFLED 240

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           +++RDHRK+ +E+ +F I+++   G+ FW  KG  I + +  Y+  ++I+  YE + TP 
Sbjct: 241 AKQRDHRKIGKELGIFMISQNVGAGLPFWLPKGATIRRVVERYIVDKEIECGYEHVYTPI 300

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           + +  L++ SGHWD Y+ +MF      +         L+PMNCP H+ ++N+ + SY+E 
Sbjct: 301 LANVDLYKTSGHWDHYQDSMFPPMDLGN----GELLVLRPMNCPHHMEIYNNDVHSYKEF 356

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  T +DAH+F   +Q+  E  ++ NL+ S+Y+DF
Sbjct: 357 PIRIAELGMMHRYEMSGTLSGLQRVREMTLNDAHIFVRPDQIKEEFTRVVNLMKSVYEDF 416

Query: 419 GFEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
             +    +LS R      K    D +W++AE ++K  +D +              GE AF
Sbjct: 417 DIKNFRFRLSYRDPENKEKYFDDDEMWNNAEAMLKSAMDDLGY------EYFEAKGEAAF 470

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK-CHPVMIHRAVFGSIER 533
           YGPK +  +K AIG +    TIQ+DF LP RF+  YV    +    PV+IHR +  ++ER
Sbjct: 471 YGPKLDVQVKTAIGLEETLSTIQLDFLLPERFDLTYVGEDGKNTHRPVVIHRGIVSTMER 530

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           F+  +IE +KG  P WL+P Q  +  I+    +YA E+        + +  D R E I  
Sbjct: 531 FVAYLIEEYKGAFPTWLAPEQVKILPISDKFNDYAYELQKEFAKKDIRVAVDDRTEKIGL 590

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIRE  + KIP  +I G+ E +ER++ +R+ G      +     +  + +E
Sbjct: 591 KIREAQLAKIPYSLIVGENEVNERTVSVRKRGEGDKGSMKFEAFLDKILEE 641


>gi|325106885|ref|YP_004267953.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Planctomyces
           brasiliensis DSM 5305]
 gi|324967153|gb|ADY57931.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Planctomyces
           brasiliensis DSM 5305]
          Length = 729

 Score =  602 bits (1552), Expect = e-170,   Method: Composition-based stats.
 Identities = 257/717 (35%), Positives = 393/717 (54%), Gaps = 75/717 (10%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE------- 56
            I +T PDGS++ +    T  D+A  IS  LA   +A  +NG++ D++ P++E       
Sbjct: 1   MINVTLPDGSVREYADDTTALDIARGISERLANDVIAADVNGQIADVARPLQELVDDPTS 60

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSS 116
            S++++T +D  SL V+RHSCAHIMA AV  ++P   +A GP    GFYYDFD ++  S 
Sbjct: 61  ISLKLLTVKDQASLGVMRHSCAHIMARAVMRLFPGTGLAFGPTTGHGFYYDFDLDERISE 120

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES-IPAKENVTLYR 175
           ++  +IE++M  II+   PF +  LS ++A EL E   +  KVE + + +    N++ YR
Sbjct: 121 EDFPRIEQEMANIISEGEPFERFALSRDEAVELCEGMNQELKVEHIRTGLSDHGNLSFYR 180

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
           QGE+ DLCRGPH+   G++K F KL+ VAGA+W+GD +   L R+YGTAW  +++L  YL
Sbjct: 181 QGEFVDLCRGPHIPRAGKIKAF-KLLSVAGAHWKGDQSGKSLQRLYGTAWFDKKDLKNYL 239

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRRKI-KDDYEE 293
             +EE+++RDHR L + + LF I      G+  W  KG  I   L  ++++++ +  YE 
Sbjct: 240 EQIEEAKRRDHRVLGKRLHLFQIDPHVGQGLCLWLPKGATIRALLEDFIKKELLERQYEP 299

Query: 294 INTPQVLDQHLWQQSGHWDS---------YRANMFAVKCA-------------------- 324
           + +P +    L++ SGH+           +  +   +                       
Sbjct: 300 VYSPHIGRVELYETSGHFPYYRDSQFAPIFGHDAGRIIDYCIRKLQDGELSGESEQTLLQ 359

Query: 325 -------------------------DDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
                                        K    + LKPMNCP H  ++    +SYR+LP
Sbjct: 360 AAEIMGYQADDYQKANSNEEKIAALRKWEKQQERYLLKPMNCPHHAQIYKSQPRSYRDLP 419

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           VRLAEFG+VYR+E +G L+G++RVRG TQDDAH+FC  EQ+  E  +   L+  + K  G
Sbjct: 420 VRLAEFGTVYRHEQTGELNGMLRVRGLTQDDAHLFCMPEQVEEEFRQTLELVQFVLKSVG 479

Query: 420 FEKIMVKLSTRPE---KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
                V+LS R     K VGS+  W  AE  ++ VL+      +  ++     GE AFYG
Sbjct: 480 LNDYRVQLSLRDPGSDKYVGSEENWQQAEASLRKVLN------ESGLSFTACEGEAAFYG 533

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK +++++DAIGR+WQ GT+Q+D+NLP RF   YV + ++   PVMIHRA FGS+ERF+G
Sbjct: 534 PKADFMVRDAIGREWQLGTVQLDYNLPERFELEYVGADNKMHRPVMIHRAPFGSMERFVG 593

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           ++IE+F G  PLWL+P Q  V  +T    +YAQ++   LK        D R+  +N KIR
Sbjct: 594 MLIEHFAGAFPLWLAPEQIRVLPVTDKVADYAQDVVKRLKKEGFRTSADMRSCKVNAKIR 653

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRF-GSTTTQKVSLLDAIPILTKESLPPDCQK 652
           +  ++ IP +++ G KEA + ++ +R    S     + L DAI     E    + ++
Sbjct: 654 DAQLELIPYMLVVGPKEAEQNAVSVRDRIESADIGMMPLDDAIAKFRDEVTNKEIRQ 710


>gi|94985607|ref|YP_604971.1| threonyl-tRNA synthetase [Deinococcus geothermalis DSM 11300]
 gi|123079875|sp|Q1IY82|SYT_DEIGD RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|94555888|gb|ABF45802.1| threonyl-tRNA synthetase [Deinococcus geothermalis DSM 11300]
          Length = 649

 Score =  602 bits (1552), Expect = e-170,   Method: Composition-based stats.
 Identities = 257/656 (39%), Positives = 386/656 (58%), Gaps = 30/656 (4%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           + +T PDG   +    AT  DVA ++   LA+ A+A  +NG++ DL  P+ EG+ + +IT
Sbjct: 1   MHVTLPDGKQLDLQAGATALDVARALGPRLAQDALAALVNGELMDLMTPLPEGAQVRLIT 60

Query: 64  PEDP-RSLAVIRHSCAHIMAEAVQSIWP-------EVQVAIGPIIEDGFYYDFDKEQPFS 115
            ++P  +  V RHS  H++++AV   +         V+  +GP IE+GFY DFD  +P  
Sbjct: 61  KKNPGDAAPVFRHSLGHVLSQAVGEFYQRKGYPREAVKRGVGPAIENGFYQDFDLPEPLK 120

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            ++L +IE  M+EII R    ++Q +    A  L     + YKVE+++ +P  E VT Y 
Sbjct: 121 EEDLPEIEAIMREIIGRGLDIVRQDVGK--AAALKHFSYDPYKVELIQELPENEPVTFYA 178

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
           QG++ DLCRGPH  +TG++   FKLM  +GAYWRG+   P+L R+YG A+ TQ+EL +YL
Sbjct: 179 QGDYVDLCRGPHFPNTGKLPGAFKLMSTSGAYWRGNEKNPILQRVYGVAFATQKELDEYL 238

Query: 236 YFLEESEKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEE 293
             LEE+ +RDHRKL RE++LF I    G G+  W   G  + + L  ++R +  + DY+ 
Sbjct: 239 ERLEEARRRDHRKLGRELELFLIDPLVGKGLPMWLPNGTVLREELTRFLREQQFQRDYQG 298

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           + TP + +  L++ SGH+  Y  + F     D+       + LKPMNCP H+ ++    +
Sbjct: 299 VVTPNIGNLDLFRTSGHYPYYSDSQFEPLSVDE-----EQYMLKPMNCPFHIRIYASKPR 353

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYR+LPVRLAEFG+VYR E SG L+GL RVRGFTQDDAH+F   +Q+  E L + +L + 
Sbjct: 354 SYRDLPVRLAEFGTVYRYEMSGELNGLTRVRGFTQDDAHIFARPDQLKKEFLDVLDLTVL 413

Query: 414 IYKDFGFEKIMVKLSTRPE---KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
           + K FG   +  ++  R     K VG  A W+ AE  +   ++ +       +   V  G
Sbjct: 414 VLKTFGMNDVRFRVGVRDPASDKYVGDPAQWEVAERQIIEAVEEVG------LPYTVEPG 467

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           + AFYGPK ++++KD +GR+WQ GTIQVD+NLP RF+  Y     ++  PVMIHRA FGS
Sbjct: 468 DAAFYGPKLDFVVKDVLGREWQLGTIQVDYNLPERFDLTYTGEDGQEHRPVMIHRAPFGS 527

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
           +ERF+GI+IE++ G+ P WL+P Q ++  I      YAQ +AN  K+  L  E D  N  
Sbjct: 528 LERFVGILIEHYGGDFPFWLAPRQIMLIPIADRHNAYAQTLANEFKAAGLRAEVDDSNNR 587

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRF---GSTTTQKVSLLDAIPILTK 643
           +N K+R   + KIP+++I GD+E + R + +R     G    + V     +  L +
Sbjct: 588 MNAKVRNAELHKIPVMLIVGDQEEARREVSVRERTPEGHKERKGVDFTALLAELQE 643


>gi|182419388|ref|ZP_02950640.1| threonyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237666667|ref|ZP_04526652.1| threonine--tRNA ligase [Clostridium butyricum E4 str. BoNT E
           BL5262]
 gi|182376719|gb|EDT74291.1| threonyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237657866|gb|EEP55421.1| threonine--tRNA ligase [Clostridium butyricum E4 str. BoNT E
           BL5262]
          Length = 643

 Score =  602 bits (1551), Expect = e-170,   Method: Composition-based stats.
 Identities = 242/649 (37%), Positives = 365/649 (56%), Gaps = 20/649 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEII 62
            IK+T  DGS+K F    +  D+A+SIS  LA+ A    INGKVCDL   V E   + I 
Sbjct: 1   MIKVTLKDGSVKEFEAGVSVLDIAKSISEGLARNAFCGTINGKVCDLRTIVNEDVELSIC 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +       +RHS +H++A AV+ ++PE ++AIGP I  GFYYDFD++  F+S +L ++
Sbjct: 61  TFDSQEGKDAVRHSISHVLAYAVKRLFPETKLAIGPSIATGFYYDFDRDTAFTSADLEKL 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M++II  +    K  L  ++A EL +   E YKVE++  +P  E ++ Y+ G++ DL
Sbjct: 121 EAEMKKIIKENPSIEKFELPRDEALELMK--DEPYKVELINDLPEDEIISFYKIGDFTDL 178

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPHV S   +K   KL + AGAYW+G+    ML+RIYGTA+  + EL ++L  LEE++
Sbjct: 179 CAGPHVMSLKNIK-AIKLTRSAGAYWKGNEKNKMLTRIYGTAFLKKAELDEFLEALEEAK 237

Query: 243 KRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVL 300
           KRDH KL RE+ LF   E    G+     KG KI QTL  ++   + K  Y    TP + 
Sbjct: 238 KRDHNKLGRELKLFTTDEKVGQGLPLLMPKGAKIVQTLQRWVEDEEEKRGYVLTKTPLMA 297

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
              L++ SGHWD Y+  MF +    D  KD   FAL+PM CP    ++N    SYR+LP+
Sbjct: 298 KSDLYKVSGHWDHYKDGMFVL---GDEEKDDEVFALRPMTCPFQYTIYNAEQHSYRDLPI 354

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R AE  +++RNE SG +HGL+RVR FT  D H+  T EQ+  E   +  LI  + +  G 
Sbjct: 355 RYAETSTLFRNEASGEMHGLIRVRQFTLADGHLIVTPEQLEEEFKGVVELIQYLMETLGI 414

Query: 421 EKIMVKL-----STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
            + +            EK +     W+  ++ M+ +LD +K      IN      E AFY
Sbjct: 415 AEKITYRFSKWDPNNTEKYINDPDAWNHTQDTMRNILDHLK------INYVEADDEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +   ++  G++    T+Q+DF L  RF+  Y++ + EK  P +IHR+  G  ER +
Sbjct: 469 GPKLDLQFRNVHGKEDTLFTVQIDFALAERFDMTYIDKNGEKKRPYIIHRSSIGCYERTL 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE + G  P WLSP+QA +  ++    +YA+++   LK   + +ETD+R E I YKI
Sbjct: 529 AMLIEEYAGAFPTWLSPVQAKILPLSDKYNDYAEKVTKALKDKGIRVETDYRAEKIGYKI 588

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           RE  +++ P I++ G+KEA    + +R   +     + L   +  +  E
Sbjct: 589 REARLERTPYILVVGEKEAENNQVSVRSRKNDDEGAMDLNAFVDRIVSE 637


>gi|269958355|ref|YP_003328142.1| threonyl-tRNA synthetase [Anaplasma centrale str. Israel]
 gi|269848184|gb|ACZ48828.1| threonyl-tRNA synthetase [Anaplasma centrale str. Israel]
          Length = 636

 Score =  602 bits (1551), Expect = e-170,   Method: Composition-based stats.
 Identities = 290/642 (45%), Positives = 434/642 (67%), Gaps = 17/642 (2%)

Query: 4   DIKLT--FPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIE 60
            I +T  FP+ +   F  H TGS+VA ++   +A   VA+ ++G + DL+ P+ ++GS++
Sbjct: 1   MINITTSFPNKTAAAFHKHVTGSEVASAMFPEIAGSIVALFVDGNLQDLATPISKDGSVD 60

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            +T E    + +IRH  AHIMA AV+ I+P+ ++AIGP IE+GFYYDFD     S  +  
Sbjct: 61  PVTIESNTGMDIIRHDAAHIMARAVREIFPDTKLAIGPTIENGFYYDFDLSHSLSEKDFE 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IE+KM +IIA+D  F+++    E+A + FE   E YK+EIL  +P  E +T+Y+ GE+ 
Sbjct: 121 AIERKMADIIAKDERFVREVWPRERAIKFFEDLGEHYKLEILSKVPLGEEITVYKHGEFV 180

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH  S   VK F KL K++GAYW GD    ML R+YGTAW++ + L  Y++ ++E
Sbjct: 181 DLCRGPHAPSARYVKAF-KLTKISGAYWLGDQKNKMLQRVYGTAWHSSEALASYIHNMQE 239

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQV 299
           +EKRDHRK+A+++  FHI  +  G +FWH KGW I++T+  Y+R K++   Y E+ TP +
Sbjct: 240 AEKRDHRKIAKDLGWFHIQNEALGQVFWHDKGWVIYRTIEEYIRCKLEKHGYLEVKTPIM 299

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           LD+ LW++SGHW+ ++ NMF V+       D +  A+KPMNCP HV +F   ++SY+ELP
Sbjct: 300 LDRKLWEKSGHWEKFKENMFVVE------NDKKELAIKPMNCPCHVQIFKSKIRSYKELP 353

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AEFG  +RNEPSGSL+GLMRVRGFTQDDAH+FCT EQ+ +E L+ + L++ +YKDFG
Sbjct: 354 IRMAEFGMCHRNEPSGSLYGLMRVRGFTQDDAHIFCTHEQVRDEVLRFYELLMEVYKDFG 413

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F+ + VKLS RPE R+GSD +WD +E  +   ++ +       +   +  GEGAFYGPK 
Sbjct: 414 FDSVTVKLSDRPENRIGSDEIWDRSEQSLMEPMNALG------VQYTINKGEGAFYGPKL 467

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           E+ LKD+IGR+WQCGT+Q+DF LP R  A+Y+    +K  PV+IHRA+ G+IERFIGI+I
Sbjct: 468 EFTLKDSIGREWQCGTVQLDFVLPDRLGAYYIGEDGKKHIPVIIHRAILGTIERFIGILI 527

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E++ GN+P+WL+P+Q  + T++    EYA+ +  +    ++ +E +   E I++KIR+  
Sbjct: 528 EHYAGNIPVWLAPVQLEILTVSGEVEEYARGLMEMALQKNVRVELNSTEENISHKIRKAI 587

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
             K+PI+ + G  EA +  + +RR+GS  T +++   A+  L
Sbjct: 588 FNKVPIVWVVGKSEAGDGCVSVRRYGSGETCRMAADKALKTL 629


>gi|15606769|ref|NP_214149.1| threonyl-tRNA synthetase [Aquifex aeolicus VF5]
 gi|8928367|sp|O67583|SYT_AQUAE RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|2984004|gb|AAC07549.1| threonyl-tRNA synthetase [Aquifex aeolicus VF5]
          Length = 638

 Score =  602 bits (1551), Expect = e-170,   Method: Composition-based stats.
 Identities = 264/647 (40%), Positives = 397/647 (61%), Gaps = 22/647 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEI 61
             IK+    G             + E       K A+   INGK+ DL  PVRE G I+ 
Sbjct: 2   EKIKVKIK-GKEYEVEKGTPLGKIFELAGI---KDALGGVINGKIIDLQTPVRESGEIKP 57

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWP--EVQVAIGPIIEDGFYYDFDKE-QPFSSDE 118
           +      SL ++RHS AHIMA+A++ ++   +V + +GP  E+GFYYD + E    + ++
Sbjct: 58  VYRGSKESLEIMRHSLAHIMAQALKELYGAKKVHLGVGPTTEEGFYYDVEVEGHKITEED 117

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L +IE+KM+EII RD P L++ LS E+A +LF+  KE YK++I++ IP +E +++Y QG+
Sbjct: 118 LPKIEQKMKEIIERDYPILRRELSREEAIKLFDKLKEKYKIDIIKEIPEEEVISVYEQGD 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + DLC+GPH+ STG+   F KL  ++GAYW+G S++P L+RIYG A+ + +E+ + L F 
Sbjct: 178 FIDLCKGPHLPSTGKAGAF-KLTSISGAYWKGRSDQPQLTRIYGIAYWSDKEVKERLKFY 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINT 296
           EE +KRDHR+L +E++ F I ++   G+I W  +G    + L  Y+R + +K  Y+ + T
Sbjct: 237 EEVKKRDHRRLGKELEFFTIDDNVGAGLILWLPRGAIYRKVLEDYLREEHLKRGYQLVYT 296

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P V    LW+ SGH + Y+ NMF     D+       + +KPMNCP H+A++    +SY+
Sbjct: 297 PHVGKSKLWETSGHLECYKQNMFPSMKIDE-----EEYYVKPMNCPFHIAIYKSRTRSYK 351

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ELP++L E G+VYR E SG LHGL+RVRGFTQDDAH+ CT EQ+ +   +  +  +S  K
Sbjct: 352 ELPLKLFELGTVYRYELSGVLHGLLRVRGFTQDDAHIVCTPEQVNDVIRETLDFALSTLK 411

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           DFGF +  + LSTRPE  +GSD  W+ ++N +K  ++ +           +  G GAFYG
Sbjct: 412 DFGFNEFKIYLSTRPEYSIGSDEQWEVSQNALKKAIEDLGY------EYEIDEGGGAFYG 465

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK +  ++DAIGR WQ  TIQ DFNLP RF+  YV   ++K  P MIHRA+ GSIERF G
Sbjct: 466 PKIDVKIRDAIGRMWQLSTIQFDFNLPERFDMTYVGPDNKKHRPYMIHRALLGSIERFTG 525

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           I++E++ G LP+WLSP Q ++  I     EYA+++   LK + +  E D R E +N KIR
Sbjct: 526 ILLEHYAGLLPIWLSPTQVMIIPIADRHHEYAKKVYEFLKENGIRAEMDLREERMNAKIR 585

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  +KKIP+I++ GD+EA   ++ +R         + L   +  + +
Sbjct: 586 DAELKKIPVILVVGDREAQNNTVSVRTKKEGNLGSMELNKFLDWIKE 632


>gi|302386675|ref|YP_003822497.1| threonyl-tRNA synthetase [Clostridium saccharolyticum WM1]
 gi|302197303|gb|ADL04874.1| threonyl-tRNA synthetase [Clostridium saccharolyticum WM1]
          Length = 653

 Score =  601 bits (1550), Expect = e-170,   Method: Composition-based stats.
 Identities = 233/656 (35%), Positives = 357/656 (54%), Gaps = 19/656 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           +K+T  DGS+K +    +  D+A  IS  LA+ A A  ++GKV DL   +  + S+ I+T
Sbjct: 1   MKITLKDGSVKEYEHAMSVIDIASDISEGLARNACAGEVDGKVVDLRTVIDGDCSLSILT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
             DP  L+  RH+ +HI+A+AV+ ++P+ ++AIGP IE+GFYYDFD    FS ++L +IE
Sbjct: 61  VSDPAGLSAYRHTASHILAQAVKRLYPQAKLAIGPSIENGFYYDFDIP-SFSREDLDKIE 119

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M++II       +  L  E+A +  E K E YKVE+++ +P    ++ YRQGE+ DLC
Sbjct: 120 DEMKKIIKEGVKIERFTLPREEAIKFMEEKGEPYKVELIQDLPEGAEISFYRQGEFTDLC 179

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+ +T  +K  +KL+  +GAYWRG     ML+R+YGTA+  ++EL ++L +L   + 
Sbjct: 180 AGPHLMNTKSIK-AYKLISSSGAYWRGSEKNAMLTRVYGTAFAKKEELNEHLEYLASIKN 238

Query: 244 RDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLD 301
           RDH KL R++++F  +   G G+     KG KI QTL  ++   + K  Y    TP +  
Sbjct: 239 RDHNKLGRDLEIFATVDVIGQGLPLLMPKGAKIVQTLQRWIEDEEEKRGYMRTKTPLMAK 298

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + L+  S HWD Y+  MF +    +   D   FAL+PM CP    V+    KSYR+LP R
Sbjct: 299 KDLYIISDHWDHYKEGMFVL---GNEETDDEVFALRPMTCPFQYYVYKQSQKSYRDLPCR 355

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
             E  +++RNE SG +HGL RVR FT  + H+    +Q+  E     +L        G E
Sbjct: 356 YGETSTLFRNEDSGEMHGLTRVRQFTISEGHLIVRPDQIEEEFKGCVDLAKYCLTTLGLE 415

Query: 422 ----KIMVKLSTRP-EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
                 M K      +  +G+  +WD+ E++M+ +LD I       I      GE AFYG
Sbjct: 416 GDVTYRMSKWDPNNADHYLGTPEMWDEVEDMMRKILDHIG------IQYTEAAGEAAFYG 469

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK +   K+  G++    TIQ+D  L  RF+  +V+    K  P +IHR   G  ER + 
Sbjct: 470 PKLDIQAKNVYGKEDTMITIQLDMFLAERFDMSFVDKDGTKKRPYIIHRTSMGCYERTLA 529

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
            +IE ++G  P WL P Q  +  I+    EYA ++A  LK + +    D R E I YKIR
Sbjct: 530 WLIEKYEGAFPTWLCPEQVRILPISEKYHEYAGKVAAQLKENGILATVDERAEKIGYKIR 589

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           E  + K+P +++ G KE  E  + +R   +    +  L   I  + +E    + +K
Sbjct: 590 EARLSKLPYMLVVGQKEEEEGVVSVRSRFNGDEGQHPLSGFIDDICREIRTKEIKK 645


>gi|326201675|ref|ZP_08191546.1| threonyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
 gi|325988275|gb|EGD49100.1| threonyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
          Length = 645

 Score =  601 bits (1550), Expect = e-169,   Method: Composition-based stats.
 Identities = 245/649 (37%), Positives = 384/649 (59%), Gaps = 18/649 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            IK+T  DGS K +    T  +VAESIS  LA+ A+A  ++G+V +L   +  + ++ ++
Sbjct: 1   MIKVTLKDGSSKEYQSGITIKEVAESISAGLARAALAGEVDGRVKELDFKLENDCALSLL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T  D       RH+ +H++A+AV+ ++P +++AIGP IE+GFYYDFD E+ F+ ++LA+I
Sbjct: 61  TFADEGGRLAYRHTASHVLAQAVKRLFPNIKLAIGPAIENGFYYDFDTEKNFAPEDLAKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M++II  D    +  L  E+A +  E K E YKVE+++ +P  E ++ Y+QG++ DL
Sbjct: 121 EKEMEKIIKEDISLERFTLPREEAIKFMEDKGEPYKVELIKDLPEGEEISFYKQGDFVDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPH+ STG++K   KLM  AGAYWRG+    ML RIYGTA+  + EL +Y+  LEE++
Sbjct: 181 CAGPHLLSTGKLK-AVKLMSAAGAYWRGNEKNKMLQRIYGTAFPKKSELEEYVTKLEEAK 239

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVL 300
           KRDH KL RE++LF   E+ G G+     KG +I QTL  ++   + +  Y    TP + 
Sbjct: 240 KRDHNKLGRELELFTTVEEIGQGLPLLMPKGARIVQTLQRFVEDEEERRGYVLTKTPFMA 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
              L++ SGHW  Y+  MF +    D  KD    AL+PM CP    ++N  L SYR+LP+
Sbjct: 300 KSDLYKLSGHWQHYKDGMFLL---GDEEKDEEVMALRPMTCPFQFMIYNTKLHSYRDLPI 356

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R  E  +++RNE SG +HGL+RVR FT  + H+ CT EQ+ +E   + +LI  + +  G 
Sbjct: 357 RYGETSTLFRNEASGEMHGLIRVRQFTISEGHLVCTPEQLEDEFKGVVDLIKFMMETLGI 416

Query: 421 EKIMVKL-----STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           E+ +            EK +G++  W++ +  M+ +LD +K      ++     GE AFY
Sbjct: 417 EEDVTYRFSKWDPKNKEKYIGNEEDWENVQGQMRTILDHLK------LDYKEAEGEAAFY 470

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +   K+  G++    T+QVDF L  R +  YV+ ++EK HP +IHR   G  ER +
Sbjct: 471 GPKLDIQCKNVHGKEDTIITVQVDFALAERLSMVYVDKNNEKKHPYIIHRTSIGCYERTL 530

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE + G  P WL P+QA +  +     ++AQ++A +L+   + +E D RNE I YKI
Sbjct: 531 AMLIEKYAGAFPTWLCPVQAKILPLVDKHHDFAQKVAQMLRDKGVKVEVDTRNEKIGYKI 590

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           RE  ++KIP +++ GDKE    ++ +R         +S    +  + +E
Sbjct: 591 REAQMEKIPYMLVIGDKEMESNAVSVRSRKEGDLGAMSAEQFVDKIVEE 639


>gi|227908819|ref|NP_758514.2| probable threonyl-tRNA synthetase 2, cytoplasmic [Mus musculus]
 gi|81896660|sp|Q8BLY2|SYTC2_MOUSE RecName: Full=Probable threonyl-tRNA synthetase 2, cytoplasmic;
           AltName: Full=Threonine--tRNA ligase; Short=ThrRS;
           AltName: Full=Threonyl-tRNA synthetase-like protein 2
 gi|26334063|dbj|BAC30749.1| unnamed protein product [Mus musculus]
          Length = 790

 Score =  601 bits (1550), Expect = e-169,   Method: Composition-based stats.
 Identities = 234/645 (36%), Positives = 350/645 (54%), Gaps = 23/645 (3%)

Query: 5   IKLTFPDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           I +    G          T   VA  IS+ LA+  V   +NG + DL  P+  + ++E++
Sbjct: 150 ISVRVAGGKTVQGERWKTTPYQVAAGISKELAEHTVIAKVNGVLWDLDRPLEGDSTVELL 209

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQ 121
             ++  + AV  HS AHI+ EA++  +    +  GP IE+GFYYD   E +  SS EL+ 
Sbjct: 210 MFDNEEAQAVYWHSSAHILGEAMELYYGGH-LCYGPPIENGFYYDMFIEDRVVSSTELSA 268

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +E   + II    PF +  +S +   E+F+     +K  IL+        T+YR G   D
Sbjct: 269 LENICKTIIKEKQPFERLEVSKDTLLEMFKY--NKFKCRILKEKVDTPTTTVYRCGPLID 326

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LC+GPHVR TG++K   K+ K +  YW G+     L RIYG ++   + +  +  F EE+
Sbjct: 327 LCKGPHVRHTGKIK-AIKIFKNSSTYWEGNPEMETLQRIYGISFPDSKMMKDWEKFQEEA 385

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVL 300
           + RDHRK+ +E +LF   +   G  F+  +G  I+  L+ ++R +    ++ E+ +P + 
Sbjct: 386 KSRDHRKIGKEQELFFFHDLSPGSCFFLPRGAFIYNALMDFIREEYHKRNFTEVLSPNMY 445

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  LW+ SGHW  Y  NMF      DT      FALKPMNCPGH  +F H  +S+RE+PV
Sbjct: 446 NSKLWETSGHWQHYSNNMFTFDVEKDT------FALKPMNCPGHCLMFAHRPRSWREMPV 499

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R A+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+  E     + + S+Y  FGF
Sbjct: 500 RFADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCMVEQIEEEIKGCLHFLQSVYSTFGF 559

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
              +  LSTRPE  +G   +WD+AE  ++  L       +      +  G+GAFYGPK +
Sbjct: 560 SFQLN-LSTRPEHFLGEIEIWDEAERQLQNSLVEFGKPWK------INPGDGAFYGPKID 612

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC-HPVMIHRAVFGSIERFIGIMI 539
             +KDAIGR  QC TIQ+DF LP RFN  YV+   +    PV+IHRA+ GS+ER I I+ 
Sbjct: 613 IKIKDAIGRYHQCATIQLDFQLPIRFNLTYVSKDGDDKNRPVIIHRAILGSVERMIAILS 672

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREH 598
           EN+ G  PLWLSP Q +V  +  +   YA +++          + D  +  T+N KIR  
Sbjct: 673 ENYGGKWPLWLSPRQVMVIPVGPACENYALQVSKECFEEGFMADVDLDDSCTLNKKIRNA 732

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            + +   I++ G+KE    ++ +R   +    ++S+   I  L  
Sbjct: 733 QLAQYNFILVVGEKEKINNAVNVRTRDNKIHGEISIASVIEKLKN 777


>gi|254995424|ref|ZP_05277614.1| Threonyl-tRNA synthetase (thrS) [Anaplasma marginale str.
           Mississippi]
          Length = 636

 Score =  601 bits (1549), Expect = e-169,   Method: Composition-based stats.
 Identities = 292/642 (45%), Positives = 435/642 (67%), Gaps = 17/642 (2%)

Query: 4   DIKLT--FPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIE 60
            I +T  FP+ +   F  H TGS+VA ++   +A   VA+ ++G + DL+ P+ ++GS++
Sbjct: 1   MINITTSFPNKTAAAFHKHVTGSEVASAMFPEIAGSIVALFVDGNLQDLATPISKDGSVD 60

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            +T E    + +IRH  AHIMA AV+ I+P+ ++AIGP IE+GFYYDFD     S  +  
Sbjct: 61  PVTIESNTGMDIIRHDAAHIMARAVREIFPDTKLAIGPTIENGFYYDFDLSHSLSEKDFE 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IE+KM +IIA+D  F+++    E+A + FE   E YK+EIL  +P  E +T+Y+ GE+ 
Sbjct: 121 AIERKMADIIAKDERFVREVWPRERAIKFFEDLGEHYKLEILSKVPLGEEITVYKHGEFV 180

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH  S   VK F KL K++GAYW GD    ML R+YGTAW++ + L  Y++ ++E
Sbjct: 181 DLCRGPHAPSARYVKAF-KLTKISGAYWLGDQKNKMLQRVYGTAWHSSEALASYIHNMQE 239

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQV 299
           +EKRDHRK+A+++  FHI  +  G +FWH KGW I++ +  Y+R K+K   Y E+ TP +
Sbjct: 240 AEKRDHRKIAKDLGWFHIQNEALGQVFWHDKGWVIYRIIEEYIRCKLKKHGYHEVKTPIM 299

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           LD+ LW++SGHW+ ++ NMF V+       D +  A+KPMNCP HV +F   ++SY+ELP
Sbjct: 300 LDRKLWEKSGHWEKFKENMFVVED------DKKELAIKPMNCPCHVQIFKSKIRSYKELP 353

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AEFG  +RNEPSGSL+GLMRVRGFTQDDAH+FCT EQ+ +E L+ + L++ +YKDFG
Sbjct: 354 IRMAEFGMCHRNEPSGSLYGLMRVRGFTQDDAHIFCTHEQVRDEVLRFYELLMEVYKDFG 413

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F+ + VKLS RPE R+GSD +WD +E  +   ++ +       +   +  GEGAFYGPK 
Sbjct: 414 FDSVTVKLSDRPENRIGSDEIWDRSEQSLMEPMNALG------VQYTINKGEGAFYGPKL 467

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           E+ LKD+IGR+WQCGT+Q+DF LP R  A+Y+    +K  PV+IHRA+ G+IERFIGI+I
Sbjct: 468 EFTLKDSIGREWQCGTVQLDFVLPDRLGAYYIGEDGKKHIPVIIHRAILGTIERFIGILI 527

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E++ GN+P WL+P+Q  + T++    EYA+++A +    ++ +E +   E I++KIR+  
Sbjct: 528 EHYAGNIPAWLAPVQLEILTVSGEVAEYARDLAEMASQENVRVELNAAEENISHKIRKAI 587

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
             K+PI+ + G  EA +R + +RR+GS  T +++   A+  L
Sbjct: 588 FNKVPIVWVVGKSEAGDRCVSVRRYGSGETCRMAAGKALKTL 629


>gi|56417255|ref|YP_154329.1| threonyl-tRNA synthetase [Anaplasma marginale str. St. Maries]
 gi|73919765|sp|Q5P9F6|SYT_ANAMM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|56388487|gb|AAV87074.1| threonyl-tRNA synthetase [Anaplasma marginale str. St. Maries]
          Length = 636

 Score =  601 bits (1549), Expect = e-169,   Method: Composition-based stats.
 Identities = 292/642 (45%), Positives = 436/642 (67%), Gaps = 17/642 (2%)

Query: 4   DIKLT--FPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIE 60
            I +T  FP+ +   F  H TGS+VA ++   +A+  VA+ ++G + DL+ P+ ++GS++
Sbjct: 1   MINITTSFPNKTAAAFHKHVTGSEVASAMFPEIAESIVALFVDGNLQDLATPISKDGSVD 60

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            +T E    + +IRH  AHIMA AV+ I+P+ ++AIGP IE+GFYYDFD     S  +  
Sbjct: 61  PVTIESNTGMDIIRHDAAHIMARAVREIFPDTKLAIGPTIENGFYYDFDLSHSLSEKDFE 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IE+KM +IIA+D  F+++    E+A + FE   E YK+EIL  +P  E +T+Y+ GE+ 
Sbjct: 121 AIERKMADIIAKDERFVREVWPRERAIKFFEDLGEHYKLEILSKVPLGEEITVYKHGEFV 180

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH  S   VK F KL K++GAYW GD    ML R+YGTAW++ + L  Y++ ++E
Sbjct: 181 DLCRGPHAPSARYVKAF-KLTKISGAYWLGDQKNKMLQRVYGTAWHSSEALASYIHNMQE 239

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQV 299
           +EKRDHRK+A+++  FHI  +  G +FWH KGW I++ +  Y+R K+K   Y E+ TP +
Sbjct: 240 AEKRDHRKIAKDLGWFHIQNEALGQVFWHDKGWVIYRIIEEYIRCKLKKHGYHEVKTPIM 299

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           LD+ LW++SGHW+ ++ NMF V+       D +  A+KPMNCP HV +F   ++SY+ELP
Sbjct: 300 LDRKLWEKSGHWEKFKENMFVVED------DKKELAIKPMNCPCHVQIFKSKIRSYKELP 353

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AEFG  +RNEPSGSL+GLMRVRGFTQDDAH+FCT EQ+ +E L+ + L++ +YKDFG
Sbjct: 354 IRMAEFGMCHRNEPSGSLYGLMRVRGFTQDDAHIFCTHEQVRDEVLRFYELLMEVYKDFG 413

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F+ + VKLS RPE R+GSD +WD +E  +   ++ +       +   +  GEGAFYGPK 
Sbjct: 414 FDSVTVKLSDRPENRIGSDEIWDRSEQSLMEPMNALG------VQYTINKGEGAFYGPKL 467

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           E+ LKD+IGR+WQCGT+Q+DF LP R  A+Y+    +K  PV+IHRA+ G+IERFIGI+I
Sbjct: 468 EFTLKDSIGREWQCGTVQLDFVLPDRLGAYYIGEDGKKHIPVIIHRAILGTIERFIGILI 527

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E++ GN+P WL+P+Q  + T++    EYA+++A +    ++ +E +   E I++KIR+  
Sbjct: 528 EHYAGNIPAWLAPVQLEILTVSGEVAEYARDLAEMASQENVRVELNAAEENISHKIRKAI 587

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
             K+PI+ + G  EA +R + +RR+GS  T +++   A+  L
Sbjct: 588 FNKVPIVWVVGKSEAGDRGVSVRRYGSGETCRMAAGKALKTL 629


>gi|241894947|ref|ZP_04782243.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Weissella
           paramesenteroides ATCC 33313]
 gi|241871665|gb|EER75416.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Weissella
           paramesenteroides ATCC 33313]
          Length = 699

 Score =  601 bits (1548), Expect = e-169,   Method: Composition-based stats.
 Identities = 252/646 (39%), Positives = 385/646 (59%), Gaps = 24/646 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           +D+++TFPDG+ K+FPV+ T  ++A+SIS SLAKKAV+  +NG+   ++D +  G + E+
Sbjct: 42  ADVQITFPDGAEKSFPVNVTPLEIAKSISSSLAKKAVSGKLNGQYVGMNDAMTTGGNFEL 101

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDK--EQPFSSDE 118
           IT +D   L ++RHS +H++A+A+  ++P+ +   +GP I +GFYYD DK      S D+
Sbjct: 102 ITKDDEEGLQLLRHSVSHLLAQALNRLYPDQIHYGVGPFIANGFYYDTDKVEGNQISVDQ 161

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
             +IEK M+ I+  + P + + +S ++A E+F+   + YK+E++  +PA E++++  QGE
Sbjct: 162 FPEIEKMMKRIVKENLPIVSREISRDEALEMFK--NDPYKIELINDLPADEHISIAVQGE 219

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             +L RG  V STG +K F KL  VAGAYWRG S+ PML RIYGTA+    +L   +   
Sbjct: 220 HVELDRGGLVPSTGWIKHF-KLTSVAGAYWRGKSSNPMLQRIYGTAFWNADDLDAEMKRR 278

Query: 239 EESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINT 296
            E+++RDHRK+  + DLF  +++ GSG+  W   G  I +TL  Y+  R+++D Y+ + T
Sbjct: 279 AEAKERDHRKIGADQDLFFTSQEVGSGLAVWMPNGAAIRRTLERYIVDREVQDGYQHVYT 338

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P + + +L++QSGHWD YR +MF          D     L+PMNCP H+ V+ H  +SYR
Sbjct: 339 PVLSNLNLYKQSGHWDHYRDDMFPPMDMG----DGEFLELRPMNCPSHIMVYKHHQRSYR 394

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +LP R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  KI  L++ +YK
Sbjct: 395 DLPFRVAELGMMHRYEKSGALTGLSRVREMTLNDGHTFVMLDQIEDEFKKILQLMVDVYK 454

Query: 417 DFGFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
           DF       +LS R  K        D +W+ A+ ++KG +D +       +      GE 
Sbjct: 455 DFDITDYRFRLSYRDPKNTEKYFDDDEMWEKAQRMLKGAMDDM------DLEYFEAEGEA 508

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           AFYGPK +  +K A+G +    TIQ+DF LP RF+  YV S  E   PVMIHR +  ++E
Sbjct: 509 AFYGPKLDVQIKTALGGEETLSTIQLDFLLPERFDVTYVGSDGELHRPVMIHRGIISTME 568

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           RF   + E +KG  P WL+P Q  +  +   +  E+AQ + + L    +  + D RNE +
Sbjct: 569 RFTAYLTEMYKGAFPTWLAPHQVRIIPVNREAHGEFAQALTDRLVKQDIRADYDGRNEKL 628

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
            Y IR     KIP  ++ GD+E S  ++ IRRFGS  T   S+   
Sbjct: 629 GYLIRNAQSLKIPYTLVIGDEEVSNDTVTIRRFGSRDTSVKSVDQF 674


>gi|317153730|ref|YP_004121778.1| threonyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
 gi|316943981|gb|ADU63032.1| threonyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
          Length = 645

 Score =  601 bits (1548), Expect = e-169,   Method: Composition-based stats.
 Identities = 271/650 (41%), Positives = 389/650 (59%), Gaps = 23/650 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAES-ISRSLAKKAVAVAINGKVCDLSDPVREG--SIE 60
            I+++   G   +    A+ +D  +  +S+   K  VA      V DL+ PV +   +IE
Sbjct: 2   QIEVS---GKQVDLAEGASCADALQQGVSKKQFKNVVAARCGEAVLDLTTPVPQTCTTIE 58

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            +  E    L +IRHS AH+MAEAV+ ++P  +V IGP I+DGFYYDFD E+ F+ ++L 
Sbjct: 59  PVFAESEEGLHIIRHSTAHLMAEAVKKLFPAAKVTIGPAIKDGFYYDFDFERSFTPEDLE 118

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IEK+M   +  +  F    +S ++AR  F++  E YK E+++ + A    T+Y  G + 
Sbjct: 119 AIEKEMLSSVGANKDFSCTAMSADEARAYFDAMGETYKGELIDDLGAD-VYTVYTHGGFA 177

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV  TG +K F KL+ VAGAYWRG      L RIYGTAW+  + L ++L  LEE
Sbjct: 178 DLCRGPHVPRTGMLKAF-KLLSVAGAYWRGSEKNKQLQRIYGTAWSDPKALKKHLDRLEE 236

Query: 241 SEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQ 298
           + KRDHRKL  ++DLF   ED G G+I WH KG  I   L  + R   +K  Y+ +  P 
Sbjct: 237 ARKRDHRKLGVQLDLFSTHEDVGGGMILWHPKGGLIRTILEDFERKEHLKRGYQIVQGPL 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L + LW++SGH+D+YR NM+       T  D +++ +KPMNC  H+ +F   ++SYR+L
Sbjct: 297 ILKRELWEKSGHYDNYRENMYF------TEIDEQSYGIKPMNCLSHMLIFKRKIQSYRDL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P R  E G V+R+E SG LHGLMRVR FTQDDAH+ C  +Q+  E + + N +  I   F
Sbjct: 351 PQRYFELGVVHRHEKSGVLHGLMRVRSFTQDDAHLICRPDQLQTEIIGVFNFVRDIMGLF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE    ++STRPEK VG+DA W+ A   +K  LD +           V  G+GAFYGPK
Sbjct: 411 GFE-FEAEISTRPEKSVGTDADWELATAALKDALDALGKP------YTVNEGDGAFYGPK 463

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            + IL+D++ R WQC TIQ DF LP RF+  YV    E+  PVM+HR + GSIERFIG++
Sbjct: 464 IDIILRDSLDRRWQCATIQCDFTLPDRFDLVYVGEDGERHRPVMLHRVILGSIERFIGVL 523

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+F G LP+WL+P+QA +  +T +  E+ ++    L    + +E D RNE + YK+RE 
Sbjct: 524 IEHFAGALPVWLAPVQARLLNVTDAQGEFTEKARAYLAGRGIRVEADTRNEKLGYKVREA 583

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
            ++KIP +++ GDKE     + IR         V+L +A  ++   +  P
Sbjct: 584 QVEKIPYMLVVGDKEVEAGCVNIRSRDGDDPGLVTLEEAAQLILDAAQAP 633


>gi|312876378|ref|ZP_07736363.1| threonyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
 gi|311796872|gb|EFR13216.1| threonyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
          Length = 647

 Score =  601 bits (1548), Expect = e-169,   Method: Composition-based stats.
 Identities = 244/650 (37%), Positives = 379/650 (58%), Gaps = 21/650 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
             I +T  DG +       +  +  ++IS  L K+AVA  I+G + DL   +  + S E+
Sbjct: 2   DKIAVTLLDGKVVKAEKGISALEFIKTISMKLYKEAVACKIDGVLKDLWTSLERDCSFEV 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           +T        V  H+ +HI+A+AV+ ++ + V++ IGP I++GFYYDFD E+  + + L 
Sbjct: 62  VTFSSDEGKKVYWHTTSHILAQAVKRLFGDKVKLGIGPAIDNGFYYDFDVEESITMELLE 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IE++MQ+II  D    +  LS E++ +L + K E YKVE++  IP  E ++ YRQGE+ 
Sbjct: 122 KIEEEMQKIIKEDLKIERFELSREESVKLMQEKGENYKVELINDIPEGETISFYRQGEFV 181

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLC GPH+ STG+VK F KL+ VAGAYWRG+S   ML RIYG ++  + EL +YL  LEE
Sbjct: 182 DLCTGPHLPSTGRVKAF-KLLSVAGAYWRGNSKNKMLQRIYGISFEKKSELDEYLKKLEE 240

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQ 298
           ++KRDH ++ RE+++F  +E    G+     KG KI Q L  ++   + K  Y    TP 
Sbjct: 241 AKKRDHNRIGRELEIFTTSEVVGQGLPLLMPKGAKILQILQRFVEDEEEKRGYLLTKTPY 300

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L++ SGHWD YR  MF ++  ++        AL+PM CP    ++N   +SYR+L
Sbjct: 301 MAKSDLYKISGHWDHYRDGMFVIEEDEN-----EVLALRPMTCPFQFLIYNSKQRSYRDL 355

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R +E  +++RNE SG +HGL+RVR FT  DAH+ C  +Q+  E   + +LI  I K  
Sbjct: 356 PIRYSETSTLFRNESSGEMHGLIRVRQFTLSDAHIICRPDQVEEEFKGVLDLIQYIMKTL 415

Query: 419 GFEKIMVKLSTR-----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           G E  +    +R      EK + +   W+  EN MK +LD +       IN     GE A
Sbjct: 416 GIENDIWYRFSRWDPNNKEKYIDNPEAWEKTENDMKNILDKLG------INYKEAKGEAA 469

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +   K+  G++    T+Q+DF L  RF+  YV+   +K  P++IHR+  G  ER
Sbjct: 470 FYGPKLDIQFKNVYGKEDTIITVQIDFALAERFDMTYVDRDGQKKRPIIIHRSSIGCYER 529

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
            + ++IE + G  PLWLSP+Q  V  ++ +  EYA+ +A +LK +   +E D+R+ET+ Y
Sbjct: 530 TLAMLIEKYNGAFPLWLSPVQIRVIPVSDNFNEYAKNVARILKENGFRVEEDYRSETVGY 589

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           KIR+  ++KIP ++I G+KE  E ++ +R          ++ D I ++ +
Sbjct: 590 KIRDAQLQKIPYMVIVGEKEQKENTVAVRDRKKGDLGSFTIEDFIAMVKE 639


>gi|222475619|ref|YP_002564036.1| Threonyl-tRNA synthetase (thrS) [Anaplasma marginale str. Florida]
 gi|255003612|ref|ZP_05278576.1| Threonyl-tRNA synthetase (thrS) [Anaplasma marginale str. Puerto
           Rico]
 gi|254783506|sp|B9KH76|SYT_ANAMF RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|222419757|gb|ACM49780.1| Threonyl-tRNA synthetase (thrS) [Anaplasma marginale str. Florida]
          Length = 636

 Score =  601 bits (1548), Expect = e-169,   Method: Composition-based stats.
 Identities = 293/642 (45%), Positives = 435/642 (67%), Gaps = 17/642 (2%)

Query: 4   DIKLT--FPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIE 60
            I +T  FP+ +   F  H TGS+VA ++   +A   VA+ ++G + DL+ P+ ++GS++
Sbjct: 1   MINITTSFPNKTAAAFHKHVTGSEVASAMFPEIAGSIVALFVDGNLQDLATPISKDGSVD 60

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            +T E    + +IRH  AHIMA AV+ I+P+ ++AIGP IE+GFYYDFD     S  +  
Sbjct: 61  PVTIESNTGMDIIRHDAAHIMARAVREIFPDTKLAIGPTIENGFYYDFDLSHSLSEKDFE 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IE+KM +IIA+D  F+++    E+A + FE   E YK+EIL  +P  E +T+Y+ GE+ 
Sbjct: 121 AIERKMSDIIAKDERFVREVWPRERAIKFFEDLGEHYKLEILSKVPLGEEITVYKHGEFV 180

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH  S   VK F KL K++GAYW GD    ML R+YGTAW++ + L  Y++ ++E
Sbjct: 181 DLCRGPHAPSARYVKAF-KLTKISGAYWLGDQKNKMLQRVYGTAWHSSEALASYIHNMQE 239

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQV 299
           +EKRDHRK+A+++  FHI  +  G +FWH KGW I++ +  Y+R K+K   Y E+ TP +
Sbjct: 240 AEKRDHRKIAKDLGWFHIQNEALGQVFWHDKGWVIYRIIEEYIRCKLKKHGYLEVKTPIM 299

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           LD+ LW++SGHW+ ++ NMF V+       D +  A+KPMNCP HV +F   ++SY+ELP
Sbjct: 300 LDRKLWEKSGHWEKFKENMFVVED------DKKELAIKPMNCPCHVQIFKSKIRSYKELP 353

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AEFG  +RNEPSGSL+GLMRVRGFTQDDAH+FCT EQ+ +E L+ + L++ +YKDFG
Sbjct: 354 IRMAEFGMCHRNEPSGSLYGLMRVRGFTQDDAHIFCTHEQVRDEVLRFYELLMEVYKDFG 413

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F+ + VKLS RPE R+GSD +WD +E  +   ++ +       +   +  GEGAFYGPK 
Sbjct: 414 FDSVTVKLSDRPENRIGSDEIWDRSEQSLMEPMNALG------VQYTINKGEGAFYGPKL 467

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           E+ LKD+IGR+WQCGT+Q+DF LP R  A+Y+    +K  PV+IHRAV G+IERFIGI+I
Sbjct: 468 EFTLKDSIGREWQCGTVQLDFVLPDRLGAYYIGEDGKKHIPVIIHRAVLGTIERFIGILI 527

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E++ GN+P WL+P+Q  + T++    EYA+++A +    ++ +E +   E I++KIR+  
Sbjct: 528 EHYAGNIPAWLAPVQLEILTVSGEVAEYARDLAEMASQENVRVELNAAEENISHKIRKAI 587

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
             K+PI+ + G  EA +R + +RR+GS  T +++   A+  L
Sbjct: 588 FNKVPIVWVVGKSEAGDRCVSVRRYGSGETCRMAAGKALKTL 629


>gi|326792022|ref|YP_004309843.1| threonyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
 gi|326542786|gb|ADZ84645.1| threonyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
          Length = 657

 Score =  601 bits (1548), Expect = e-169,   Method: Composition-based stats.
 Identities = 241/650 (37%), Positives = 364/650 (56%), Gaps = 19/650 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            IK+T  DGS+K      T   VAE +S  LA+ A A  +NG++ DL   +  + ++EI+
Sbjct: 1   MIKITLKDGSVKECQKGITVLGVAEELSAGLARMACAGKVNGEMVDLRTELNGDCNLEIL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T  D       RH+ AHI+A+AV+ ++PEV++AIGP IEDGFYYDFD E+ F   +  +I
Sbjct: 61  TFNDKEGKWAFRHTAAHILAQAVKRVFPEVKLAIGPAIEDGFYYDFDTERHFVEADFEKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M++I+    P  +  L  E+A +L E  +E YKVE++  +P  E +T Y+QG++ DL
Sbjct: 121 EAEMKKIVKEKLPIERFELPREEAIKLMEEAEEPYKVELIRELPEGEKITFYKQGDFVDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPH+ ST  V+ F K++  AGAYW+G+    ML+RIY TA+  + +L  +L  LEE++
Sbjct: 181 CAGPHLMSTKPVEAF-KILSAAGAYWKGNEKNKMLARIYATAFTKKADLAAHLEALEEAK 239

Query: 243 KRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVL 300
           KRDH KL RE+ LF   E    G+     KG +I QTL  ++   + K  Y    TP + 
Sbjct: 240 KRDHNKLGRELKLFTTDEKVGQGLPLLMPKGARIVQTLQRFVEDEEEKRGYVLTKTPLMA 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
              L++ SGHWD Y+  MF +    D  KD   FAL+PM CP    V+N    SYR+LP+
Sbjct: 300 KSDLYKMSGHWDHYKDGMFVL---GDEEKDKEVFALRPMTCPFQFTVYNAEQHSYRDLPI 356

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R  E  +++RNE SG +HGL+RVR FT  + H+ CT EQ+ +E   +  LI  +    G 
Sbjct: 357 RYGETSTLFRNESSGEMHGLIRVRQFTISEGHLVCTPEQLEDEFRGVIELINYMMATLGI 416

Query: 421 EKIMVKL-----STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           E  +             K +     W+  E +M+ +LD ++      IN    +GE AFY
Sbjct: 417 ENDISYRFSKWDPANTGKYINDPEAWERTEGLMRNILDHLQ------INYEEAVGEAAFY 470

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +   K+  G++    T+Q+DF L  R    Y+++  EK HP++IHR   G  ER +
Sbjct: 471 GPKLDIQFKNVHGKEDTIITVQIDFALGERLGMTYIDADGEKKHPLIIHRTSIGCYERTL 530

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHL-SIETDFRNETINYK 594
            ++IE + G  P WL+P+   V  ++    +YA E+    K H +  +E D+R E I YK
Sbjct: 531 AMLIEKYAGQFPTWLAPVAVKVLPLSDKYADYAAEVVKAFKDHGILKVEADYRTEKIGYK 590

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IRE  +++IP I++ G +E   +++ +R          SL   +  + +E
Sbjct: 591 IREARMERIPYIVVVGAEEMENKTVSVRSRQKGDEGVQSLESFVNRVDEE 640


>gi|325283002|ref|YP_004255543.1| threonyl-tRNA synthetase [Deinococcus proteolyticus MRP]
 gi|324314811|gb|ADY25926.1| threonyl-tRNA synthetase [Deinococcus proteolyticus MRP]
          Length = 650

 Score =  600 bits (1547), Expect = e-169,   Method: Composition-based stats.
 Identities = 246/656 (37%), Positives = 379/656 (57%), Gaps = 31/656 (4%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           +++T PDG   + P  AT  DVA  IS  LA  A+A   NG++ DL  P+ EG+ + +IT
Sbjct: 1   MQITLPDGKQLDLPQGATALDVARQISERLAGDAIAATANGELTDLMTPLPEGAQVSLIT 60

Query: 64  PEDP-RSLAVIRHSCAHIMAEAVQSIW-------PEVQVAIGPIIEDGFYYDFDKEQPFS 115
            ++P  + AV RHS  H+M++AV   +        +++  +GP IE+G+Y DFD  +P S
Sbjct: 61  KKNPGDAAAVFRHSLGHVMSQAVGEFYAAKGYSADQLKRGVGPAIENGWYQDFDLPEPLS 120

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            D+L +IE+ M++II R   F ++ +S  +A E      + YK E++  +P  E VTLY 
Sbjct: 121 EDDLPEIERLMRDIIGRKLDFSRREVSKAEATEF--FAHDPYKAELIRDLPEDEVVTLYM 178

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
           QG++ DLCRGPH  +TG++   FKLM  +GAYWRG+ N P+L RIYG A+ TQ+EL +YL
Sbjct: 179 QGDYTDLCRGPHFPTTGRLPTAFKLMSTSGAYWRGNENNPILQRIYGVAFATQKELDEYL 238

Query: 236 YFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEE 293
           + LEE+++RDHR+L +E+DLF  ++  G G+  W   G  I + L  ++   ++K+ Y+ 
Sbjct: 239 HLLEEAKRRDHRRLGKELDLFFTSDVIGPGLPIWLPSGATIRRELERFIVDVELKNGYQH 298

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           + +P +    L++ SGHWD Y+ +MF +        D     L+PMNCP H+ ++ H   
Sbjct: 299 VYSPALAKSELYKISGHWDHYQEDMFPIMHL-----DQEELVLRPMNCPHHIQIYAHKPH 353

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYRELP+++AE G++YR E SG L GL RVR  T +DAH+FC  +Q+  E   +  +I  
Sbjct: 354 SYRELPLKIAELGTMYRYEQSGQLTGLSRVRSMTLNDAHIFCRPDQIQEEFKAVVRMIQE 413

Query: 414 IYKDFGFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL 469
           +Y+  GF+    +LS R  +        D +WD AE  ++  L  +       ++     
Sbjct: 414 VYEVLGFKDYSYRLSLRDPQDTEKYYQDDQMWDTAEAQLREALSDLG------VDYYESP 467

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG 529
           G+ AFYGPK +  ++ A+G+D    T Q+DF LP +F+  YV     +  PVMIHR V  
Sbjct: 468 GDAAFYGPKLDVQVRSALGKDETISTAQLDFLLPQKFDLEYVAEDGSRQRPVMIHRGVIS 527

Query: 530 SIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE 589
           ++ER    +IEN  GN P WL+P Q ++  I      YA+E+   L +  L  E D  ++
Sbjct: 528 TMERMTAFLIENTAGNFPFWLAPRQVMIIPIADRHNAYAEELRAELVAAGLRAEVDTSSD 587

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRF---GSTTTQKVSLLDAIPILT 642
            +N K+R+  +KKIP+++I GDKE   R++ +R     G    + V+  D    L 
Sbjct: 588 RMNAKVRDAELKKIPVMLIVGDKEQEARAVSVRERTPEGHQERKGVAFSDLKSELV 643


>gi|255004741|ref|ZP_05279542.1| Threonyl-tRNA synthetase (thrS) [Anaplasma marginale str. Virginia]
          Length = 636

 Score =  600 bits (1547), Expect = e-169,   Method: Composition-based stats.
 Identities = 293/642 (45%), Positives = 435/642 (67%), Gaps = 17/642 (2%)

Query: 4   DIKLT--FPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIE 60
            I +T  FP+ +   F  H TGS+VA ++   +A   VA+ ++G + DL+ P+ ++GS++
Sbjct: 1   MINITTSFPNKTAAAFHKHVTGSEVASAMFPEIAGSIVALFVDGNLQDLATPISKDGSVD 60

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            +T E    + +IRH  AHIMA AV+ I+P+ ++AIGP IE+GFYYDFD     S  +  
Sbjct: 61  PVTIESNTGMDIIRHDAAHIMARAVREIFPDTKLAIGPTIENGFYYDFDLSHSLSEKDFE 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IE+KM +IIA+D  F+++    E+A + FE   E YK+EIL  +P  E +T+Y+ GE+ 
Sbjct: 121 AIERKMADIIAKDERFVREVWPRERAIKFFEDLGEHYKLEILSKVPLGEEITVYKHGEFV 180

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH  S   VK F KL K++GAYW GD    ML R+YGTAW++ + L  Y++ ++E
Sbjct: 181 DLCRGPHAPSARYVKAF-KLTKISGAYWLGDQKNKMLQRVYGTAWHSSEALASYIHNMQE 239

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQV 299
           +EKRDHRK+A+++  FHI  +  G +FWH KGW I++ +  Y+R K+K   Y E+ TP +
Sbjct: 240 AEKRDHRKIAKDLGWFHIQNEALGQVFWHDKGWVIYRIIEEYIRCKLKKHGYLEVKTPIM 299

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           LD+ LW++SGHW+ ++ NMF V+       D +  A+KPMNCP HV +F   ++SY+ELP
Sbjct: 300 LDRKLWEKSGHWEKFKENMFVVED------DKKELAIKPMNCPCHVQIFKSKIRSYKELP 353

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AEFG  +RNEPSGSL+GLMRVRGFTQDDAH+FCT EQ+ +E L+ + L++ +YKDFG
Sbjct: 354 IRMAEFGMCHRNEPSGSLYGLMRVRGFTQDDAHIFCTHEQVRDEVLRFYELLMEVYKDFG 413

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F+ + VKLS RPE R+GSD +WD +E  +   ++ +       +   +  GEGAFYGPK 
Sbjct: 414 FDSVTVKLSDRPENRIGSDEIWDRSEQSLMEPMNALG------VQYTINKGEGAFYGPKL 467

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           E+ LKD+IGR+WQCGT+Q+DF LP R  A+Y+    +K  PV+IHRAV G+IERFIGI+I
Sbjct: 468 EFTLKDSIGREWQCGTVQLDFVLPDRLGAYYIGEDGKKHIPVIIHRAVLGTIERFIGILI 527

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E++ GN+P WL+P+Q  + T++    EYA+++A +    ++ +E +   E I++KIR+  
Sbjct: 528 EHYAGNIPAWLAPVQLEILTVSGEVAEYARDLAEMASQENVRVELNAAEENISHKIRKAI 587

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
             K+PI+ + G  EA +R + +RR+GS  T +++   A+  L
Sbjct: 588 FNKVPIVWVVGKSEAGDRCVSVRRYGSGETCRMAAGKALKTL 629


>gi|24657723|gb|AAH39225.1| Threonyl-tRNA synthetase-like 2 [Mus musculus]
          Length = 790

 Score =  600 bits (1547), Expect = e-169,   Method: Composition-based stats.
 Identities = 233/645 (36%), Positives = 349/645 (54%), Gaps = 23/645 (3%)

Query: 5   IKLTFPDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           I +    G          T   VA  IS+ LA+  V   +NG + DL  P+  + ++E++
Sbjct: 150 ISVRVAGGKTVQGERWKTTPYQVAAGISKELAEHTVIAKVNGVLWDLDRPLEGDSTVELL 209

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQ 121
             ++  + AV  HS AHI+ EA++  +    +  GP IE+GFYYD   E +  SS EL+ 
Sbjct: 210 MFDNEEAQAVYWHSSAHILGEAMELYYGGH-LCYGPPIENGFYYDMFIEDRVVSSTELSA 268

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +E   + II    PF +  +S +   E+F+     +K  IL+        T+YR G   D
Sbjct: 269 LENICKTIIKEKQPFERLEVSKDTLLEMFKY--NKFKCRILKEKVDTPTTTVYRCGPLID 326

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LC+GPHVR TG++K   K+ K +  YW G+     L RIYG ++   + +  +    EE+
Sbjct: 327 LCKGPHVRHTGKIK-AIKIFKNSSTYWEGNPEMETLQRIYGISFPDSKMMKDWEKIQEEA 385

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVL 300
           + RDHRK+ +E +LF   +   G  F+  +G  I+  L+ ++R +    ++ E+ +P + 
Sbjct: 386 KSRDHRKIGKEQELFFFHDLSPGSCFFLPRGAFIYNALMDFIREEYHKRNFTEVLSPNMY 445

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  LW+ SGHW  Y  NMF      DT      FALKPMNCPGH  +F H  +S+RE+PV
Sbjct: 446 NSKLWETSGHWQHYSNNMFTFDVEKDT------FALKPMNCPGHCLMFAHRPRSWREMPV 499

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R A+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+  E     + + S+Y  FGF
Sbjct: 500 RFADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCMVEQIEEEIKGCLHFLQSVYSTFGF 559

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
              +  LSTRPE  +G   +WD+AE  ++  L       +      +  G+GAFYGPK +
Sbjct: 560 SFQLN-LSTRPEHFLGEIEIWDEAERQLQNSLVEFGKPWK------INPGDGAFYGPKID 612

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC-HPVMIHRAVFGSIERFIGIMI 539
             +KDAIGR  QC TIQ+DF LP RFN  YV+   +    PV+IHRA+ GS+ER I I+ 
Sbjct: 613 IKIKDAIGRYHQCATIQLDFQLPIRFNLTYVSKDGDDKNRPVIIHRAILGSVERMIAILS 672

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREH 598
           EN+ G  PLWLSP Q +V  +  +   YA +++          + D  +  T+N KIR  
Sbjct: 673 ENYGGKWPLWLSPRQVMVIPVGPACENYALQVSKECFEEGFMADVDLDDSCTLNKKIRNA 732

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            + +   I++ G+KE    ++ +R   +    ++S+   I  L  
Sbjct: 733 QLAQYNFILVVGEKEKINNAVNVRTRDNKIHGEISIASVIEKLKN 777


>gi|332638317|ref|ZP_08417180.1| threonyl-tRNA synthetase [Weissella cibaria KACC 11862]
          Length = 658

 Score =  600 bits (1547), Expect = e-169,   Method: Composition-based stats.
 Identities = 248/653 (37%), Positives = 388/653 (59%), Gaps = 24/653 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
           +D+K+TFPDG++K FP   T  ++A  IS+SLAKK+V+  +NG    ++D +  +G   +
Sbjct: 2   ADVKITFPDGAVKEFPAGVTPLEIANGISKSLAKKSVSGKLNGHYVGMNDGINEDGEFSL 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDK--EQPFSSDE 118
           IT +D     ++RHS +H++A+A+  ++P+ +   +GP IE+GFYYD DK      S+D+
Sbjct: 62  ITKDDAEGTQLLRHSVSHLLAQALNRLYPDQIHYGVGPAIENGFYYDTDKVDGSQISADQ 121

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
             +IEK M++I + + P + + ++ ++A E+F+   + YK+E++  +PA E++++  QGE
Sbjct: 122 FPEIEKMMKQIASENLPIVSREITRDEALEMFK--NDPYKIELINDLPADEHISIAVQGE 179

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             +L RG  V ST  +K F KL  VAGAYWRG S+ PML RIYGTA+ T +EL   L   
Sbjct: 180 HVELDRGGLVPSTNWIKHF-KLTSVAGAYWRGKSSNPMLQRIYGTAFWTAEELDAELKRR 238

Query: 239 EESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINT 296
           EE+++RDHRK+  E DLF  +++   G+  W   G  I +TL  Y+  R+++D Y+ + T
Sbjct: 239 EEAKERDHRKIGAEQDLFFTSQEVGAGLAVWMPNGAAIRRTLERYIVDREVQDGYQHVYT 298

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P + + +L++QSGHWD YR +MF          D     L+PMNCP H+ VF H  +SYR
Sbjct: 299 PIMSNLNLYKQSGHWDHYRDDMFPPMDMG----DGEFLELRPMNCPSHIMVFKHKPRSYR 354

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ELP R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  KI  L+I +Y 
Sbjct: 355 ELPFRIAELGMMHRYEKSGALTGLSRVREMTLNDGHTFVMPDQIEDEFKKILGLMIDVYA 414

Query: 417 DFGFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
           DF       +LS R  +        D +W+ A+ ++K  +D ++      ++     GE 
Sbjct: 415 DFDITDYRFRLSYRDPENTEKYYDDDDMWEKAQTMLKKAMDDLE------LDYFEAEGEA 468

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           AFYGPK +  +K A+G +    TIQ+DF LP RF+  YV    E   PVMIHR +  ++E
Sbjct: 469 AFYGPKLDVQIKTALGGEETLSTIQLDFLLPERFDVNYVGPDGELHRPVMIHRGIISTME 528

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           RF   + E +KG  P WL+P Q  +  +   +  ++A+++A+ L    +  E + RNE +
Sbjct: 529 RFTAYLTEMYKGAFPTWLAPHQVRIIPVNRDAHGKFAKDLADRLIKQGIRAEYEDRNEKL 588

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            Y IR+    K+P  ++ GD+E +  ++ IRRFGST T+  S+      L  +
Sbjct: 589 GYLIRDAQTSKVPYTLVIGDEEVNNNTVTIRRFGSTDTKSKSVDAFEAQLMAD 641


>gi|332265240|ref|XP_003281636.1| PREDICTED: probable threonyl-tRNA synthetase 2, cytoplasmic isoform
           1 [Nomascus leucogenys]
          Length = 793

 Score =  599 bits (1545), Expect = e-169,   Method: Composition-based stats.
 Identities = 237/648 (36%), Positives = 353/648 (54%), Gaps = 23/648 (3%)

Query: 2   PSDIKLTFPDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
            + I +    G          T   VA  IS+ LA+  V   +NG++ DL  P+  +  +
Sbjct: 150 SNIITVRVAGGQTVQGEVWKTTPYQVAAEISQELAESTVIAKVNGELWDLDRPLEGDSFL 209

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDE 118
           E++T ++  + AV  HS AHI+ EA++  +    +  GP IE+GFYYD   E +  SS E
Sbjct: 210 ELLTFDNEEAQAVYWHSSAHILGEAMELYYGGH-LCYGPPIENGFYYDMFIEDRAVSSTE 268

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L+ +E   + II    PF +  +S E   E+F+     +K  IL         T+YR G 
Sbjct: 269 LSALENICKAIIKEKQPFERLEVSKEILLEMFKC--NKFKCRILNEKVHTAATTVYRCGP 326

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLC+GPHVR TG++K   K+ K +  YW G+     L RIYG ++   + +  +    
Sbjct: 327 LIDLCKGPHVRHTGKIKTI-KIFKNSSTYWEGNPEMETLQRIYGISFPDNKMMRNWEKSQ 385

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
           EE++ RDHRK+ +E +LF   +   G  F+  +G  I+ TL  ++R +    D+ E+ +P
Sbjct: 386 EEAKNRDHRKIGKEQELFFFHDLSPGSCFFLPRGAFIYNTLTDFIREEYHKRDFTEVLSP 445

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  LW+ SGHW  Y  NMF  +   DT      FALKPMNCPGH  +F H  +S+RE
Sbjct: 446 NMYNSKLWEASGHWQHYSENMFTFEIEKDT------FALKPMNCPGHCLMFAHRPRSWRE 499

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           +P+R A+FG ++RNE SG+L GL RVR F QDDAH+FCT EQ+  E       + S+Y  
Sbjct: 500 MPIRFADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCTVEQIEEEIKGCLQFLQSVYST 559

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF   +  LSTRPE  +G   +W++AE  ++  L       +      +  G+GAFYGP
Sbjct: 560 FGFSFQLN-LSTRPENFLGEIEMWNEAEKQLQSSLMDFGEPWK------MNPGDGAFYGP 612

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIG 536
           K +  +KDAIGR  QC TIQ+DF LP RFN  YV+    +K  PV+IHRA+ GS+ER I 
Sbjct: 613 KIDIKIKDAIGRYHQCATIQLDFQLPVRFNLTYVSKDGDDKKRPVIIHRAILGSVERMIA 672

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FRNETINYKI 595
           I+ EN+ G  P WLSP Q +V  +  +  +YA ++++         + D   N T+N KI
Sbjct: 673 ILSENYGGKWPFWLSPHQVMVIPVGPACEKYALQVSSEFFEEGFMADVDLDHNCTLNKKI 732

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           R   + +   I++ G+KE    ++ +R   +    ++ +  AI  L  
Sbjct: 733 RNAQLAQYNFILVVGEKEKVNNAVNVRTRDNKIHGEILVTSAIDKLKN 780


>gi|308509394|ref|XP_003116880.1| CRE-TARS-1 protein [Caenorhabditis remanei]
 gi|308241794|gb|EFO85746.1| CRE-TARS-1 protein [Caenorhabditis remanei]
          Length = 749

 Score =  599 bits (1544), Expect = e-169,   Method: Composition-based stats.
 Identities = 222/647 (34%), Positives = 353/647 (54%), Gaps = 21/647 (3%)

Query: 2   PSDIKLTFPDGSIKNF-PVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
              I++T PDG + +      T  ++AE IS+ LA+ AV   +NG V DL  P     ++
Sbjct: 103 SEPIEITLPDGKVHDGKSWRTTPFEIAEKISKGLAEAAVISKVNGVVWDLDRPFEGNATL 162

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDE 118
           E++  ED  +  V  HS AH++ EA++  +    +  GP IE+GFYYD + + +  S ++
Sbjct: 163 ELLKFEDDEAKQVFWHSSAHVLGEAMER-YCGGHLCYGPPIEEGFYYDMWHENRTISPED 221

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
             +I++ ++  +     F +  ++ E   E+F+     +KV I++        T+YR G 
Sbjct: 222 FPKIDQIVKAAVKDKQKFERLEMTKENLLEMFKY--NEFKVRIIKEKINTPKTTVYRCGP 279

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLCRGPHVR TG+VK    + K + +YW G ++   L R+YG ++   ++L ++    
Sbjct: 280 LIDLCRGPHVRHTGKVK-AMAITKNSSSYWEGKADAESLQRLYGISFPDSKQLKEWQKLQ 338

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRKL +E DLF       G  FW+ KG  I+  L+ ++R++ +   + E+ TP
Sbjct: 339 EEAAKRDHRKLGKEQDLFFFHPLSPGSAFWYPKGAHIYNKLVDFIRKQYRRRGFTEVITP 398

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + ++ LW+ SGHW  Y  +MF ++       +   F LKPMNCPGH  +F H   +Y E
Sbjct: 399 NMYNKKLWETSGHWQHYSEDMFKIEV------EKEEFGLKPMNCPGHCLMFGHMPHTYNE 452

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP R A+FG ++RNE SG+L GL RVR F QDDAH+FC K+Q+  E  +  + +   Y+ 
Sbjct: 453 LPFRFADFGVLHRNEMSGALTGLTRVRRFQQDDAHIFCRKDQIAEEIKQCLDFLEYAYEK 512

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
                  + LSTRPE  +G    W+ AE  +   L+             +  G+GAFYGP
Sbjct: 513 VFGFTFKLNLSTRPEGFLGEIETWNQAEADLTEALNATGRKW------ALNPGDGAFYGP 566

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  ++DA+ R++QC TIQ+DF LP++F+  Y +   EK  PVMIHRAV GS+ER   I
Sbjct: 567 KIDITIQDALKRNFQCATIQLDFQLPNQFDLSYFDEKGEKQRPVMIHRAVLGSVERMTAI 626

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIR 596
           + E++ G  P WLSP Q  + T+  S  +YA ++   +      +E D    +T+N ++R
Sbjct: 627 LTESYGGKWPFWLSPRQCKIITVHESVRDYASDVKKKIFEAGFEVEYDATCGDTMNKQVR 686

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              + +   I++ G KE    ++ +R   +    +V L   +    +
Sbjct: 687 NSQLAQFNFILVIGAKEKENGTVNVRTRDNAVRGEVPLEKLLSKFRR 733


>gi|321252491|ref|XP_003192424.1| threonine-tRNA ligase [Cryptococcus gattii WM276]
 gi|317458892|gb|ADV20637.1| Threonine-tRNA ligase, putative [Cryptococcus gattii WM276]
          Length = 771

 Score =  599 bits (1544), Expect = e-169,   Method: Composition-based stats.
 Identities = 232/658 (35%), Positives = 358/658 (54%), Gaps = 32/658 (4%)

Query: 5   IKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGK-VCDLSDPVR-EGSIEI 61
           I +TFPDG +++      T   +A+ IS SLA + +   +N + + DL+ P+    S+ +
Sbjct: 115 ITITFPDGKTVQGTSWETTPLQIAKDISPSLADRVIIAKVNNQQLWDLTRPLEASCSLAL 174

Query: 62  ITPEDP----RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDF--DKEQPF 114
           +  + P     +  V  HS AH++ EA +  +    +  GP +E+G F+YD      +  
Sbjct: 175 LDFDSPDNSYEARQVFWHSSAHVLGEACERRYEGCCLGYGPPLEEGGFFYDMGLANGRTI 234

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
           S D+   IE   +  +    PF +  L  E   E+F+  K      I + +P   + T+Y
Sbjct: 235 SQDDYKPIEDVCKAAVKEKQPFERLELPKEVLLEMFKYNKYKQHY-IQDKVPDGTSSTVY 293

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
           R G   DLC GPHV  TG++K    + K + +Y+ GD+      R+YG ++    ++ +Y
Sbjct: 294 RCGPLIDLCLGPHVPHTGRIKSL-AVTKNSSSYFLGDAKNDTFQRVYGMSFPDNAQMKEY 352

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEE 293
             +LEE+ KRDHRK+ ++ +LF   +   G  F+   G +I+ TL+++++ +  K  + E
Sbjct: 353 KKYLEEAAKRDHRKIGKDQELFVFNDLSPGSAFFLPMGMRIYNTLMTFIKEEYFKRGFSE 412

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           + +P + + +LW+ SGHW +Y  +MF +K       D   FALKPMNCPGH  +F+   +
Sbjct: 413 VGSPNIFNANLWKTSGHWQNYAEDMFQLKV------DEDQFALKPMNCPGHCLIFDARER 466

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SY+ELP+R AEFG ++RNE SG+L GL RVR F QDDAH+FCT +Q+  E       + +
Sbjct: 467 SYKELPLRFAEFGVLHRNEASGALSGLTRVRRFVQDDAHIFCTPDQVEAELYSAFEFLDA 526

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           +YK FGF   +   +  P+K +G   LW+ AEN ++ VL+          N  V   + A
Sbjct: 527 VYKPFGFTYKVGLSTRNPKKWMGELELWNKAENTLREVLEQKVPG-----NWHVNEEDAA 581

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-----EKCHPVMIHRAVF 528
           FYGPK ++ L DA+ R+WQCGTIQ+DFNLP RFN  Y ++       +   PVMIHRA+ 
Sbjct: 582 FYGPKLDFQLTDALKRNWQCGTIQLDFNLPERFNLKYHSAEQSPDGTQFARPVMIHRAIL 641

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRN 588
           GS+ERFI I+ E+  G  PLWLSP Q +V  +     EYAQ++A   +   L  E D  +
Sbjct: 642 GSLERFIAIITESTGGKWPLWLSPRQVVVIPVAKPFTEYAQKVAKTFQEAGLYAEVDLTD 701

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ---KVSLLDAIPILTK 643
            T+N KIR     +   I++ G  E   +++ IR            V L  A+  + K
Sbjct: 702 NTLNKKIRNAQTAQWNFIMVVGQDELDAQAVNIRNRDDEVQGREETVVLSRAVEQIVK 759


>gi|58263294|ref|XP_569057.1| threonine-tRNA ligase [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|134108684|ref|XP_776995.1| hypothetical protein CNBB5220 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50259678|gb|EAL22348.1| hypothetical protein CNBB5220 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57223707|gb|AAW41750.1| threonine-tRNA ligase, putative [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 772

 Score =  599 bits (1544), Expect = e-169,   Method: Composition-based stats.
 Identities = 231/660 (35%), Positives = 355/660 (53%), Gaps = 32/660 (4%)

Query: 3   SDIKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGK-VCDLSDPVR-EGSI 59
             I +TFPDG +++      T   +A+ IS SLA + +   +N + + DL+ P+    S+
Sbjct: 114 EPITITFPDGKTVQATSWETTPLQLAKDISPSLADRVIIAKVNNQQLWDLTRPLEASCSL 173

Query: 60  EIITPEDP----RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFD--KEQ 112
            ++  + P     +  V  HS AH++ EA +  +    +  GP +E+G F+YD      +
Sbjct: 174 ALLDFDSPDNNYEARQVFWHSSAHVLGEACERRYEGCCLGYGPPLEEGGFFYDMSLANGR 233

Query: 113 PFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVT 172
             S D+   IE   +  +    PF +  L  E   E+F+  K      I + +P   + T
Sbjct: 234 TISQDDYKPIEDVCKAAVKEKQPFERLELPKEVLLEMFKYNKYKQHY-IQDKVPDGTSST 292

Query: 173 LYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELT 232
           +YR G   DLC GPHV  TG++K    + K + +Y+ GD+      R+YG ++    ++ 
Sbjct: 293 VYRCGPLIDLCLGPHVPHTGRIKSL-AVTKNSSSYFLGDAKNDTFQRVYGMSFPDNAQMK 351

Query: 233 QYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDY 291
           +Y  +LEE+ KRDHRK+ ++ +LF   +   G  F+   G +I+ TL+S+++ +  K  +
Sbjct: 352 EYKKYLEEAAKRDHRKIGKDQELFIFNDLSPGSAFFLPMGMRIYNTLMSFIKDEYFKRGF 411

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
            E+ +P + + +LW+ SGHW +Y  +MF +K       D    ALKPMNCPGH  +F+  
Sbjct: 412 SEVGSPNIFNANLWKTSGHWQNYAEDMFQLK------ADEEQLALKPMNCPGHCLIFDAR 465

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI 411
            +SY+ELP+R AEFG ++RNE SG+L GL RVR F QDDAH+FCT +Q+  E       +
Sbjct: 466 ERSYKELPLRFAEFGVLHRNEASGALSGLTRVRRFVQDDAHIFCTPDQVEAELYSAFEFL 525

Query: 412 ISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
            ++YK FGF   +   +  P+K +G   LW+ AE  ++ VL+          N  V   +
Sbjct: 526 DAVYKPFGFTYKVGLSTRNPKKWMGDLELWNKAEGTLREVLEQKVPG-----NWHVNEED 580

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-----EKCHPVMIHRA 526
            AFYGPK ++ L DA+ R WQCGTIQ+DFNLP RFN  Y +        +   PVMIHRA
Sbjct: 581 AAFYGPKLDFQLTDALKRSWQCGTIQLDFNLPERFNLKYHSPEQNPDGTQFARPVMIHRA 640

Query: 527 VFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF 586
           + GS+ERFI I+ E+  G  PLWLSP Q +V  +     EYAQ++A   +   L  E D 
Sbjct: 641 ILGSLERFIAIITESTGGKWPLWLSPRQVVVIPVAKPFTEYAQKVAKTFQEAGLYAEVDL 700

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ---KVSLLDAIPILTK 643
            + T+N KIR     +   I++ G  E   +++ IR            V+L  A+  + K
Sbjct: 701 TDNTLNKKIRNAQTAQWNFIMVVGQDELDAQAVNIRNRDDEVQGREETVALSRAVEQIVK 760


>gi|88608148|ref|YP_506185.1| threonyl-tRNA synthetase [Neorickettsia sennetsu str. Miyayama]
 gi|123763729|sp|Q2GEB1|SYT_NEOSM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|88600317|gb|ABD45785.1| threonyl-tRNA synthetase [Neorickettsia sennetsu str. Miyayama]
          Length = 637

 Score =  599 bits (1544), Expect = e-169,   Method: Composition-based stats.
 Identities = 279/627 (44%), Positives = 407/627 (64%), Gaps = 15/627 (2%)

Query: 20  HATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCA 78
             T   V       +  K +A ++NG   DLS  +  + +IE I  E    + ++RH CA
Sbjct: 20  GKTVGSVISDFDAEIFSKTIAASVNGVSVDLSYRLDCDANIEPILLESEAGIEILRHDCA 79

Query: 79  HIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLK 138
           H+MA+AVQ ++PE ++ IGP+I+DGFYYDF     FS  +  +IE+K++EII R+   ++
Sbjct: 80  HVMAQAVQELYPETKLGIGPVIDDGFYYDFSTPIAFSDSDFEKIEEKIREIIQRNYRIIR 139

Query: 139 QYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFF 198
           +  S + A   F+ K E YKVE++  IP +E +++Y+QG++ DLCRGPH  STG +K F 
Sbjct: 140 EEWSRDDAVSFFQKKGEKYKVELISRIPPEEKISIYKQGDFIDLCRGPHAPSTGWLKHF- 198

Query: 199 KLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI 258
           KL+KV+ AYW GD+    L RIYGTAW T+  L  YL FL E++KRDHR + + M+LFH+
Sbjct: 199 KLLKVSTAYWLGDAKSDSLQRIYGTAWATKDGLEAYLSFLHEAKKRDHRAIGKTMELFHL 258

Query: 259 AEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRAN 317
            E+  G +FWH  G+ +++ L +Y+R K+K   Y E+ TP V ++ LW++SGHW  ++ N
Sbjct: 259 QEEAQGQVFWHENGFILYRVLENYIRNKLKTHGYREVKTPLVYNKCLWERSGHWSKFKEN 318

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           MF ++  D        F+LKPMNCP H+ V+   LKSYR+LP+RLAEFG  +RNE SG+L
Sbjct: 319 MFVIRSDDG------EFSLKPMNCPAHIEVYKQSLKSYRDLPLRLAEFGMCHRNEASGAL 372

Query: 378 HGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGS 437
           HGLMRVRGF QDDAH+FCT +Q+ +E +    L+  +Y+D GF ++ V+ S RPE R+G+
Sbjct: 373 HGLMRVRGFVQDDAHIFCTPQQICDETIAFCGLLKEVYRDLGFTEVEVRFSDRPEVRLGN 432

Query: 438 DALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ 497
           D  WD AE  +K  +D         +   +  GEGAFYGPK E++L DA+ R WQCGT+Q
Sbjct: 433 DETWDKAEIALKSAMDKAG------LIYTLNPGEGAFYGPKIEFVLVDALKRKWQCGTLQ 486

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIV 557
           VDF LP R +A Y++   +K HPVM+HRA+ G+ ERF+GI+IE++ G  PLWL+P Q  V
Sbjct: 487 VDFVLPERLDATYIDHEGKKQHPVMLHRAILGTFERFLGILIEHYDGKFPLWLAPTQVAV 546

Query: 558 TTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASER 617
            TIT    EYA+ + N L    +   +DF N+ I+YKIR H+ +++PI+ I G  E    
Sbjct: 547 LTITEKVEEYAKSLLNHLSKTGIRAVSDFSNQRIDYKIRYHTTRRVPILWIIGRIEEKSN 606

Query: 618 SIGIRRFGSTTTQKVSLLDAIPILTKE 644
           S+ +RR GS+ ++  ++  A+  + +E
Sbjct: 607 SVTVRRMGSSESEVKTVDTALGDILRE 633


>gi|328955410|ref|YP_004372743.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Coriobacterium
           glomerans PW2]
 gi|328455734|gb|AEB06928.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Coriobacterium
           glomerans PW2]
          Length = 643

 Score =  599 bits (1543), Expect = e-169,   Method: Composition-based stats.
 Identities = 257/648 (39%), Positives = 404/648 (62%), Gaps = 17/648 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
           M   I +  PDGS +  P  +T +D+A SI   LA+ A+A  +NG++ DL+ P+  G  +
Sbjct: 1   MRDQISVRLPDGSQRELPAESTLADLAASIGAGLARAALAGKVNGEIVDLARPLACGDEV 60

Query: 60  EIITPED-PRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           EI+T      +LAV+RHS AHI+A A+  ++ +V    GP IEDGFYYD    +  S D+
Sbjct: 61  EILTNRSGADALAVLRHSAAHILAAAMAHLYGDVVFGTGPAIEDGFYYDMRLPRSISPDD 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPA-KENVTLYRQG 177
            + IE +M++I+A D PF+++ + +++AR L     +  K+E++    A  + +T+YR G
Sbjct: 121 FSTIEAEMKKIVAADLPFVREEVGYDEARRLLA--DQPLKLELIAEHEANGDALTIYRVG 178

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           ++ DLC GPH+ STG +K F    K+AGAYWR +++  ML+R+YGTA+ ++++L ++L+ 
Sbjct: 179 DFIDLCAGPHLSSTGMLKAFSLT-KLAGAYWRANADNEMLTRLYGTAFFSKRDLEEHLFR 237

Query: 238 LEESEKRDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEIN 295
           LEE+ KRDH+KL RE+ +F    E G G+  +   G ++ + + +++ R   +  Y+E+ 
Sbjct: 238 LEEAAKRDHKKLGRELGIFTMFDEAGPGLPLYLPAGARVIRLMETWLSRELYRRGYQEVI 297

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR--TFALKPMNCPGHVAVFNHGLK 353
           TP +    +W+ SGH+  YR NM+     + T ++ R   F +KPMNCPGHV ++ + L 
Sbjct: 298 TPHIYKSDVWKTSGHYGYYRDNMYFFNINEGTAEEPRLSEFGVKPMNCPGHVLIYKNDLH 357

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYRELP+R  EFG+VYR+E SG+++GL R RGFTQDDAHVFC ++Q+ +E   I + +  
Sbjct: 358 SYRELPIRYFEFGTVYRHELSGAVNGLFRARGFTQDDAHVFCREDQVIDEIDSIMDTVDF 417

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           I   F       ++STRP+K +G D +W+ AE  +   LD      +  I   +  G+GA
Sbjct: 418 IMGTF-ELPYTCEISTRPDKSIGGDDMWEKAERFLAEALD------RRGIPFEINAGDGA 470

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  +KD++GR WQC TIQVDFNLP RF+  Y  + +++  P M+HRA+FGSI+R
Sbjct: 471 FYGPKIDVKVKDSLGRTWQCSTIQVDFNLPERFDLSYRTADNDELRPWMLHRAIFGSIDR 530

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           F+GI+IE+  GN PLWL+P+Q  +  I    ++YA EI  L+++     E    NE +  
Sbjct: 531 FLGIVIEHTAGNFPLWLAPVQCAIIPIADRHLDYACEIKRLIEAAGGRAEVAEHNEPMRA 590

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           KI     KK+P +++ GDKEA+ R++ +R         + + + + I+
Sbjct: 591 KIARAEAKKVPYMLVVGDKEAAARTVSVREHSEGDRGSMPIDEFLSII 638


>gi|330800299|ref|XP_003288175.1| threonyl-tRNA synthetase [Dictyostelium purpureum]
 gi|325081805|gb|EGC35308.1| threonyl-tRNA synthetase [Dictyostelium purpureum]
          Length = 713

 Score =  599 bits (1543), Expect = e-169,   Method: Composition-based stats.
 Identities = 232/651 (35%), Positives = 356/651 (54%), Gaps = 26/651 (3%)

Query: 3   SDIKLTFPDGSI-KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIE 60
             I +T PDG +        T  DVA+ ISR LA   V+  +N ++ D+S P+  +  +E
Sbjct: 78  EPILITLPDGKVIHGVKNKTTPYDVAKGISRGLADSIVSSIVNEQIHDISRPLEGDCKLE 137

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF-DKEQPFSSDEL 119
           +   +         HS AHI+ +A++ ++   Q+ IGP   +GFYYD    E+  S+++ 
Sbjct: 138 LCKFDTDAGKKTFWHSSAHILGQAMERVYGG-QLCIGPATSEGFYYDMAMGEKIVSAEDY 196

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             I +   +I+    PF +  +  + A  +F+     YK EI+  IPA E V+LYR G  
Sbjct: 197 KLINEVAMKIVQEKQPFERLAVPRDVALTMFKY--NKYKTEIISKIPASETVSLYRCGTL 254

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV +T  VK F  + K + AYW G +    L R+YG A+  ++++ +Y  F++
Sbjct: 255 VDLCRGPHVPNTSYVKAFSVI-KNSSAYWLGKAENDTLQRVYGIAFPDKKQMEEYENFMK 313

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+  RDHR + R  +LF       G  F+   G +I+  L+ ++R +     + E+ +P 
Sbjct: 314 EAALRDHRNIGRAQELFFFHPFSPGSAFFLPHGTRIYNKLVDFIRAEYHNRGFSEVISPS 373

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V  Q LW+QSGHW  Y  NMF +        D  TF+LKPMNCPGH  +F    +SYREL
Sbjct: 374 VFSQKLWEQSGHWAKYSENMFNI------PVDKETFSLKPMNCPGHCLMFGSRQRSYREL 427

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R A+FG ++RNE +G+L GL RVR F QDDAH+FCT + + NE       +  +Y  F
Sbjct: 428 PLRFADFGVLHRNELAGALTGLTRVRKFQQDDAHIFCTVDMIENEINSCLEFMQHVYGIF 487

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE  +  LSTRPE  +G  + W++AE  ++  L+      Q      +  G+GAFYGPK
Sbjct: 488 GFEFQLN-LSTRPENFLGEISQWNEAEKSLEKALNRFGKPWQ------LNPGDGAFYGPK 540

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE--KCHPVMIHRAVFGSIERFIG 536
            +  + D + R  QC TIQ+DF LP RF+  Y +  +   K  PV+IHRA+ GS+ER + 
Sbjct: 541 IDIQIYDCLKRAHQCATIQLDFQLPIRFDLEYQSDDATDVKKRPVIIHRAILGSVERMMA 600

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           I++E+  G  P W+SP QAIV T+     EY  ++A  +       + D  ++TI  K+R
Sbjct: 601 ILMEHTAGKWPFWVSPRQAIVVTVAKQHNEYGHKVAKQISELGYYCDIDESDKTIGKKVR 660

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI---PILTKE 644
           E  + +   I++ G +E     + +R   +     +S+ + +    +L+KE
Sbjct: 661 EAQLAQYNYILVVGQEEIDNNKVNVRTRDNVVRGSISVEELVAEFAVLSKE 711


>gi|88942337|sp|Q7UJ52|SYT_RHOBA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|327537946|gb|EGF24643.1| threonyl-tRNA synthetase [Rhodopirellula baltica WH47]
          Length = 743

 Score =  599 bits (1543), Expect = e-169,   Method: Composition-based stats.
 Identities = 254/708 (35%), Positives = 381/708 (53%), Gaps = 74/708 (10%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS----- 58
           ++++  PDGS+K  P  AT  DVA+ IS  LA+  VA  ++G + D   P+ E +     
Sbjct: 16  EVQVRLPDGSLKTQPADATAMDVAKEISEGLARSVVAAEVDGTIVDSFRPLGEIADDENV 75

Query: 59  --IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSS 116
             + ++T  D  +L V+RHS AH+MA A+  I+  V +A GP    GFYYDFD  +  S 
Sbjct: 76  VPLRLLTTRDESALDVLRHSAAHVMARAIMRIYKGVSLAFGPTTSGGFYYDFDMPEKISE 135

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES-IPAKENVTLYR 175
           D+  +IE ++++II    PF +  L  ++AR+L +   +  KVE +E+ +  +  V+ YR
Sbjct: 136 DDFPKIEAEIKKIIKAKEPFERFVLERDEARKLCDDLDQDLKVEHIETGLGDQATVSFYR 195

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
           QGE+ DLCRGPH+   G +K   KL+ VAGAYW+GD++   L R+YGTA+  ++EL  YL
Sbjct: 196 QGEFVDLCRGPHIPHAGMIK-AIKLLSVAGAYWKGDASGRQLQRVYGTAFFDKKELASYL 254

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRRKI-KDDYEE 293
             +EE+++RDHR L ++  LF I  +   G+  W  KG ++  TL  ++RR++    Y+ 
Sbjct: 255 EQIEEAKRRDHRVLGKQHGLFAINPEVGQGLCLWLPKGARVRVTLEDFLRRELLSRGYDP 314

Query: 294 INTPQVLDQHLWQQSGHWDSYRA------------------------------------- 316
           + +P +    +++ SGH+  YR                                      
Sbjct: 315 VYSPHIGRVEMYETSGHFPYYRDSQFAPLFGSEVGGLLDAWSTRLDKDDLSKDDEDKLIA 374

Query: 317 --NMFAVKCADDTIK---------------DLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
              +F VK  D                   +   + LKPMNCP H  +F    +SYR+LP
Sbjct: 375 AAEVFGVKLPDYKPSASNDAKKDVLHRWQLNHERYLLKPMNCPHHCQIFGAQPRSYRQLP 434

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +RL EFG+VYR+E +G L+G+MRVRG TQDDAH+FCT +Q+  E      L   + +  G
Sbjct: 435 LRLFEFGTVYRHEQTGELNGMMRVRGLTQDDAHIFCTADQVEEEFRATIELTKFVLESVG 494

Query: 420 FEKIMVKLSTRPEK---RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
            +   V+LS R       VGS+  WD AE  ++GVL+      Q  ++     GE AFYG
Sbjct: 495 LDDYRVQLSLRDPDSSKYVGSEENWDHAEGALRGVLE------QSGLSFNEEPGEAAFYG 548

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK +++++D IGR WQ GT+Q+D+NLP RF   Y  + +    PVMIHRA FGS+ERF G
Sbjct: 549 PKADFMVRDCIGRSWQLGTVQLDYNLPERFKLEYKGNDNATHRPVMIHRAPFGSLERFTG 608

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           ++IE+F G  P+WLSP Q  V  ++  +VEYA  +A  L      +  D  +  +  KIR
Sbjct: 609 MLIEHFAGAFPMWLSPEQIRVLPLSDKSVEYATAVAKQLDEAGFKVTVDASDGKVQAKIR 668

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
              I  +  + + G KEA    + +R         + + +AI  L KE
Sbjct: 669 NAQIDLVNYMAVVGPKEAESGQVALRDRIEGDLGSMPIKEAIARLQKE 716


>gi|254796675|ref|YP_003081511.1| threonyl-tRNA synthetase [Neorickettsia risticii str. Illinois]
 gi|254589907|gb|ACT69269.1| threonyl-tRNA synthetase [Neorickettsia risticii str. Illinois]
          Length = 647

 Score =  599 bits (1543), Expect = e-169,   Method: Composition-based stats.
 Identities = 285/634 (44%), Positives = 411/634 (64%), Gaps = 15/634 (2%)

Query: 13  SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLA 71
           S        T   V    +  +  K +A ++NG   DLS  +  + +IE +  E    + 
Sbjct: 13  SSFTVSFGETVGSVISGFNAGVFSKTIAASVNGVSVDLSYCLDCDANIEPVLLESEAGIE 72

Query: 72  VIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIA 131
           ++RH CAHIMA+AVQ ++PE ++ IGP+I+DGFYYDF    PFS  +  +IE+K++EII 
Sbjct: 73  ILRHDCAHIMAQAVQELYPETKLGIGPVIDDGFYYDFSTLAPFSDSDFEKIEEKIKEIIQ 132

Query: 132 RDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRST 191
           R+ P +++  S + A   F+ K E YKVE++  IP KE +++Y+QG++ DLCRGPH  ST
Sbjct: 133 RNYPIIREEWSRDDAVSFFQKKGEKYKVELVSKIPPKEKISIYKQGDFIDLCRGPHAPST 192

Query: 192 GQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAR 251
           G +K F KL+KV+ AYW GD+    L RIYGTAW T+  L  YL FL E+++RDHR + +
Sbjct: 193 GWLKHF-KLLKVSTAYWLGDAKNDSLQRIYGTAWATKDGLESYLSFLHEAKRRDHRAIGK 251

Query: 252 EMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGH 310
            M+LFH+ E+  G +FWH  G+ +++ L +Y+R K+K  DY E+ TP V  + LW++SGH
Sbjct: 252 TMELFHLQEEAQGQVFWHENGFLLYRVLENYIRSKLKAHDYREVKTPVVYSKCLWERSGH 311

Query: 311 WDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYR 370
           W  ++ NMF ++  D        F+LKPMNCP H+ VF   LKSYR+LP+RLAEFG  +R
Sbjct: 312 WSKFKENMFVIRSDDG------EFSLKPMNCPAHIEVFKQSLKSYRDLPLRLAEFGMCHR 365

Query: 371 NEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR 430
           NE SG+LHGLMRVRGF QDDAH+FCT EQ+ +E +    L+  +Y+D GF ++ V+ S R
Sbjct: 366 NEASGALHGLMRVRGFVQDDAHIFCTPEQICDETVAFCELLKEVYRDLGFTEVEVRFSDR 425

Query: 431 PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRD 490
           PE R+G+D  WD AE  +K  +D      +  +   +  GEGAFYGPK E++L DA+ R 
Sbjct: 426 PEVRLGNDETWDKAEIALKSAMD------KAGLVYTLNPGEGAFYGPKIEFVLVDALKRK 479

Query: 491 WQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL 550
           WQCGT+QVDF LP R +A Y++   +K HPVM+HRA+ G+ ERF+GI+IE++ G  PLWL
Sbjct: 480 WQCGTLQVDFVLPERLDATYIDHEGKKQHPVMLHRAILGTFERFLGILIEHYDGKFPLWL 539

Query: 551 SPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           +P Q  V TIT    EYA+ + N L    +   +DF N+ I+YKIR H+ +++PI+ I G
Sbjct: 540 APTQVAVLTITEKVEEYAKSLLNHLSKTGIRAVSDFSNQRIDYKIRYHTTRRVPILWIIG 599

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
             E    S+ +RR GS+ ++  ++  A+  +  E
Sbjct: 600 RIEEKNNSVTVRRMGSSESEVKTVDTALDDILGE 633


>gi|148988673|ref|ZP_01820106.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
 gi|147925874|gb|EDK76949.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
          Length = 600

 Score =  599 bits (1543), Expect = e-169,   Method: Composition-based stats.
 Identities = 248/609 (40%), Positives = 381/609 (62%), Gaps = 23/609 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  +  +GSIEI+
Sbjct: 1   MINITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGSIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQ 121
           TP+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D      S+++L +
Sbjct: 61  TPDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNTAGQISNEDLPR 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWF 180
           IE++MQ+I+  + P +++ ++ ++ARE+F+   + YK+E++E     E  +T+YRQGE+ 
Sbjct: 121 IEEEMQKIVKENFPSIREEVTKDEAREIFK--NDPYKLELIEEHSEDEGGLTIYRQGEYV 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV STG+++ F  L  VAGAYWRG+S+  M+ RIYGTAW  +++L  YL   EE
Sbjct: 179 DLCRGPHVPSTGRIQIFHLLH-VAGAYWRGNSDNAMMQRIYGTAWFDKKDLKNYLQMREE 237

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           +++RDHRKL +E+DLF I+++   G+ FW   G  I + L  Y+  +++   Y+ + TP 
Sbjct: 238 AKERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVNKELASGYQHVYTPP 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L++ SGHWD Y+ +MF          D   F L+PMNCP H+ VF H + SYREL
Sbjct: 298 LASVELYKTSGHWDHYQEDMFPTMDMG----DGEEFVLRPMNCPHHIQVFKHHVHSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  + +D H+F T EQ+  E  +   LII +Y+DF
Sbjct: 354 PIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYEDF 413

Query: 419 GFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
                  +LS R      K   +D +W++A+ +++  LD +       ++     GE AF
Sbjct: 414 NLTDYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMG------VDYFEAEGEAAF 467

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K A+G++    TIQ+DF LP RF+  Y+ +  E   PVMIHR V  ++ERF
Sbjct: 468 YGPKLDIQIKTALGKEETLSTIQLDFLLPERFDLKYIGADGEDHRPVMIHRGVISTMERF 527

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
             I+IEN+KG  P WL+P Q  +  ++    V+YA E+A  L+   +  + D RNE + +
Sbjct: 528 TAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAKKLRDRGVRADVDERNEKMQF 587

Query: 594 KIREHSIKK 602
           KIR     +
Sbjct: 588 KIRASQTAR 596


>gi|300767159|ref|ZP_07077071.1| threonine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
 gi|300494978|gb|EFK30134.1| threonine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
          Length = 688

 Score =  598 bits (1542), Expect = e-169,   Method: Composition-based stats.
 Identities = 232/654 (35%), Positives = 369/654 (56%), Gaps = 23/654 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           + I + FPDG+ K F    T   +A+SIS SLAK++VA   N ++ D   P+  +GSIEI
Sbjct: 36  ASINVKFPDGAEKQFDAGVTTEAIAKSISPSLAKRSVAGKFNDQIVDYRQPLTTDGSIEI 95

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE----QPFSSD 117
           I  +    L V+R + A ++A AV+ ++P +    G    +GF++D D      +  S D
Sbjct: 96  IAADSEDGLNVLRQTAAQVLANAVKQLFPNIHFGSGEGNANGFFFDTDNPDEDGKQVSED 155

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +L  I  KM  II +D P  ++ LS   A  L         +    +    + V +Y+QG
Sbjct: 156 DLEAISDKMAAIIKQDLPIEREVLSKADALALVGDNPYQQDLVNERAAANNDQVVVYKQG 215

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           ++ DL  G  + STG+VK F KL+ VAGAYW+G S+ PML RIYGTA+  Q++L   L  
Sbjct: 216 DFVDLSDGAQLASTGKVKVF-KLLSVAGAYWQGKSSNPMLQRIYGTAFLKQKDLDADLKR 274

Query: 238 LEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEIN 295
            +E+ +RDHR +  E+DLF +    G+G+ +W   G  I + +  Y+  +++ + Y+ + 
Sbjct: 275 RQEARERDHRVIGNELDLFFVDPKVGNGLPYWMPNGATIRRQIERYIIDKEVANGYQHVY 334

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP + +  +++QSGHWD YR +MF          D     L+PMNCP H+ ++NH ++SY
Sbjct: 335 TPVLANLDVYKQSGHWDHYREDMFPPMDMG----DGEQLELRPMNCPSHIQIYNHHIRSY 390

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP+R+AE G ++R E SG+L GL RVR  T +D H F   +Q+  E  KI +L++ +Y
Sbjct: 391 RELPLRIAELGMMHRYEKSGALTGLSRVREMTLNDGHTFVALDQIEEEFKKILSLMVEVY 450

Query: 416 KDFGFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
           +DF       +LS R  +        DA+W+ ++ ++K  +D +       ++     GE
Sbjct: 451 EDFDISDYRFRLSYRDPENKEKYFDDDAMWERSQKMLKSAMDDMG------LDYFEAEGE 504

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
            AFYGPK +   K A+G +    TIQ+DF LP RF+  YV +  E+  PVMIHR +  ++
Sbjct: 505 AAFYGPKLDVQTKTALGGEETLSTIQLDFLLPERFDLKYVGADGEEHRPVMIHRGLVSTM 564

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITS-SAVEYAQEIANLLKSHHLSIETDFRNET 590
           ERF+  + E +KG  P WL+P Q  +  + + +   YA+ +   L +  + +  D RNE 
Sbjct: 565 ERFVAYLTEIYKGAFPTWLAPKQVTIIPVNNGAHGAYAETVRRRLAAEGVRVSIDDRNEK 624

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           + YKIRE   KK+P +++ GD+E +  S+ +R++G   T+  ++   I  +T+E
Sbjct: 625 MGYKIRESQTKKVPYLLVVGDQEVANGSVSVRKYGEERTESEAVDMFIGAITQE 678


>gi|55981844|ref|YP_145141.1| threonyl-tRNA synthetase [Thermus thermophilus HB8]
 gi|7388285|sp|P56881|SYT_THET8 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|6689424|emb|CAB65483.1| threonyl-tRNA synthetase [Thermus thermophilus]
 gi|55773257|dbj|BAD71698.1| threonyl-tRNA synthetase [Thermus thermophilus HB8]
          Length = 659

 Score =  598 bits (1542), Expect = e-169,   Method: Composition-based stats.
 Identities = 265/657 (40%), Positives = 408/657 (62%), Gaps = 25/657 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           + +  PDG     P  AT  DVA ++     ++AV   ++G++ DL  P+ +G+ + ++T
Sbjct: 1   MTVYLPDGKPLELPEGATAKDVARALGEGWERRAVGAIVDGELYDLLKPLPQGAKVRLLT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPE-------VQVAIGPIIEDGFYYDFDKEQPFSS 116
            +DP    + RH+ AH++A+AV+  + E       V++ +GP+IE GFYYD +  +P S 
Sbjct: 61  EKDPEFQTLFRHTLAHVLAQAVKEFFREKGYDPESVRLGVGPVIEKGFYYDIEAPEPLSD 120

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
           ++L  IE KM+EI+ RD P  +  LS E+A   +   K+ YK E++  IP  E ++ Y+Q
Sbjct: 121 EDLPAIEAKMREILKRDLPLRRFVLSREEALARYRG-KDPYKTELVLEIPEGEEISFYQQ 179

Query: 177 GE----WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELT 232
           G+    + DLCRGPHV STG++   FKL  VAGAYWRGD NRPML R+YG A+ T +EL 
Sbjct: 180 GDEAYGFTDLCRGPHVPSTGRIPPHFKLTHVAGAYWRGDENRPMLQRVYGVAFRTAEELK 239

Query: 233 QYLYFLEESEKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRRK-IKDD 290
           +YL+ LEE++KRDHR+L RE++LF I    G G++ W  KG  + + L+++MR + ++  
Sbjct: 240 EYLWQLEEAKKRDHRRLGRELELFLIDPLVGKGLVLWLPKGNVVREELMAFMREEQVRRG 299

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH 350
           Y+ + TP +    L++ SGH+  Y  + F      +   +   + LKPMNCP H+ ++ +
Sbjct: 300 YQLVTTPHIGSLELYKTSGHYPYYAESQFPPISFKER-GEEEEYLLKPMNCPHHIRIYAY 358

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
             +SYRELP+RLAEFG+VYR E +G L GL RVRGFTQDDAH+FCT E++  E L + +L
Sbjct: 359 RKRSYRELPLRLAEFGTVYRYEKAGELLGLTRVRGFTQDDAHIFCTPEEVKGEFLGVLDL 418

Query: 411 IISIYKDFGFEKIMVKLSTRPEK---RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGV 467
           ++ ++   G +    ++  R  K    VG +A W  AE  ++        +++  +   V
Sbjct: 419 VLKVFATLGLKDYRARIGVRDPKSDKYVGDEAKWALAERQIEEA------AAEAGLRYTV 472

Query: 468 LLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAV 527
             G+ AFYGPK ++++KDA+GR+WQ GTIQVD+NLP RF   YV    E+  PVM+HRA 
Sbjct: 473 EEGDAAFYGPKLDFVVKDALGREWQLGTIQVDYNLPERFGLTYVGKDGEEHRPVMLHRAP 532

Query: 528 FGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR 587
           FGS+ERFIGI+IE+F G+ PLWL+P+QA+V  ++    +YA+E+A  LK   L  E D R
Sbjct: 533 FGSLERFIGILIEHFAGDFPLWLAPVQAVVVPVSEKQEDYAREVAGRLKEAGLRAEADTR 592

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            E +  +IR+  ++K+P I++ G++E +E ++ +RR        + L   +    +E
Sbjct: 593 PERMQARIRDAEVQKVPYILVVGEREKAEGAVSVRRRKKGNLGTMPLAAFLEGALRE 649


>gi|196012975|ref|XP_002116349.1| hypothetical protein TRIADDRAFT_50865 [Trichoplax adhaerens]
 gi|190580940|gb|EDV21019.1| hypothetical protein TRIADDRAFT_50865 [Trichoplax adhaerens]
          Length = 680

 Score =  598 bits (1541), Expect = e-168,   Method: Composition-based stats.
 Identities = 230/648 (35%), Positives = 356/648 (54%), Gaps = 23/648 (3%)

Query: 2   PSDIKLTFPDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
              IK+T PDG +        T   VA SIS+ LA   V   +NG + DL + +  + ++
Sbjct: 39  SHPIKITLPDGKVVEGESWKTTSYKVAASISQGLADNCVVAKVNGVIKDLDEALTEDCTL 98

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDE 118
           E++  ++  +  V  HS AHI+ EA++  +    +  GP I +GFYYD   E+   S ++
Sbjct: 99  ELLKFDNEEAQKVYWHSSAHILGEAMERYFGGC-LCYGPPIAEGFYYDMFIEKNQVSGND 157

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
             +++  ++ I+    PF+K  +  E   E+F+     +KV ILE        T+YR G 
Sbjct: 158 FEKLDTIVKAILKDKQPFVKLEMKKEDLLEMFKY--NKFKVRILEERVKTPTTTVYRCGP 215

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLCRGPHVR TG++K      K + +YW G+     L R+YG ++   +++ ++  F 
Sbjct: 216 LIDLCRGPHVRHTGKIKAMTLT-KNSSSYWEGNCEAESLQRVYGISFPDSKQMKEWKKFQ 274

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
           EE+ KRDHRK+ R+ +LF  +E   G  F+  +G  I+  L+  MR + +   + E+ +P
Sbjct: 275 EEAAKRDHRKIGRDQELFFFSELSPGSCFFLPRGAHIYGILMQLMRDQYRKRGFHEVLSP 334

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW  SGHW  Y+ +MF      D       F LKPMNCPGH  +F+H  +S+RE
Sbjct: 335 NIYSSKLWMTSGHWQHYKDDMFTFDVEKD------QFGLKPMNCPGHCVMFSHRPRSWRE 388

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R AEFG ++RNE SG+L GL RVR F QDDAH+FC  +Q+ +E     + +  IY  
Sbjct: 389 LPLRYAEFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCRDDQVKDEIKGCLDFLKYIYDT 448

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
            GF+  +  LSTRP++ +G  A WD AE  ++  LD         +  G+   +GAFYGP
Sbjct: 449 LGFQLKL-FLSTRPDEFMGEIATWDRAEQQLRESLDEFG------LKWGLKEKDGAFYGP 501

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC-HPVMIHRAVFGSIERFIG 536
           K +  + DA+ R  QC TIQ+DF LP+RFN  YV  + +    PV+IHRA+ GS+ER I 
Sbjct: 502 KIDIQVLDALRRPHQCATIQLDFQLPTRFNLTYVGKNGDDTLRPVIIHRAILGSVERMIA 561

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKI 595
           ++ ENF G  P WLSP QA+V  + +   EYA ++ + L S    ++ D    +T+N K+
Sbjct: 562 VLCENFAGKWPFWLSPRQAMVIPVAAKFDEYALQVRDQLHSAGFYVDVDLAPGDTMNKKV 621

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           R   + +    ++ G KE   +S+ +R   +    + +++  I    +
Sbjct: 622 RNAQLAQYNFSMVVGQKECENKSVNVRSRNNQVYGEQTIVKVIERFEE 669


>gi|225851210|ref|YP_002731444.1| threonyl-tRNA synthetase [Persephonella marina EX-H1]
 gi|225645886|gb|ACO04072.1| threonyl-tRNA synthetase [Persephonella marina EX-H1]
          Length = 646

 Score =  598 bits (1541), Expect = e-168,   Method: Composition-based stats.
 Identities = 270/642 (42%), Positives = 401/642 (62%), Gaps = 24/642 (3%)

Query: 16  NFPVHATGSDVAESISRSLAK--KAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAV 72
            F    T  D+  ++     K    V   +N ++ DL  P+R G  +  +T +DP SL +
Sbjct: 13  EFEDGVTLKDIISALEGEGKKIKNVVGGKLNDQIIDLHTPIRTGGDLTFLTKKDPESLEI 72

Query: 73  IRHSCAHIMAEAVQSIWPE--VQVAIGPIIEDGFYYDFDKE-QPFSSDELAQIEKKMQEI 129
           +RHS AHIMA+A++ ++ +  V + IGP  E+GFYYD + E +  + ++L  IE+KM+EI
Sbjct: 73  LRHSFAHIMAQALKELYGDKNVHLGIGPTTENGFYYDVEIEGKRLTEEDLPVIEEKMREI 132

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILES-IPAKENVTLYRQGEWFDLCRGPHV 188
           I R+    ++ L  ++A +LFE K+E YK++I++  IP  E +++Y+Q ++ DLCRGPH+
Sbjct: 133 IERNCEIERKELPRDEALKLFEEKREIYKIDIIKHQIPEGEPISVYQQCDFIDLCRGPHL 192

Query: 189 RSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRK 248
            STG+   F KL+ +AGAYWRG    PML RIYG A+  +++L +Y+  LEE++KRDHRK
Sbjct: 193 LSTGEAGVF-KLVSLAGAYWRGKEGNPMLQRIYGVAFWNEKDLKKYMNMLEEAKKRDHRK 251

Query: 249 LAREMDLFHIAED-GSGVIFWHRKGWKIFQTLI-SYMRRKIKDDYEEINTPQVLDQHLWQ 306
           L RE++LF I ED G G+  W  KG  I   +  ++    IK  Y+ + TP V  + LWQ
Sbjct: 252 LGRELELFIIDEDVGGGLALWLPKGAVIRNEIETAWKEEHIKRGYQLVYTPHVGKEQLWQ 311

Query: 307 QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFG 366
            SGH D YR NMF          +   + +KPMNCP HV ++    +SY+ELP++LAE G
Sbjct: 312 TSGHVDFYRENMFPEMMI-----EEEGYFVKPMNCPFHVEIYKSRQRSYKELPIKLAELG 366

Query: 367 SVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK 426
           +VYR E SG LHGLMRVRGFTQDDAH+ C ++Q+  E   + +L++   + +GF +  + 
Sbjct: 367 TVYRYERSGVLHGLMRVRGFTQDDAHIICREDQVEKEIQDVLHLVLDTLRTYGFNEFQIF 426

Query: 427 LSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDA 486
           LSTRPEK VG D +W+ A   ++  ++++       ++  +  G GAFYGPK +  +KDA
Sbjct: 427 LSTRPEKSVGDDRMWEVATESLRKAIESVG------LDYQIDEGGGAFYGPKIDVKIKDA 480

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNL 546
           IGR WQC TIQ DFNLP RF+ +Y+   +++  P MIHRA+FGSIERFIG++IE++ G L
Sbjct: 481 IGRMWQCSTIQFDFNLPERFDMYYIGEDNKRHRPYMIHRAIFGSIERFIGVLIEHYAGLL 540

Query: 547 PLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPII 606
           PLWLSP+QA +  +  + + YA+E+   LK   L +E D R+E +N KIR+  ++KIP +
Sbjct: 541 PLWLSPVQAKIIPVADTHIPYAKEVEKKLKEAGLRVEVDERSERMNRKIRDAELQKIPYM 600

Query: 607 IICGDKEASERSIGIRRFGSTTTQKVSLLDAI---PILTKES 645
           +I GDKE    S+ +R          ++   I     L +E 
Sbjct: 601 LIVGDKEQQTGSVSVRTKKKGNVGLFTVDQFIQNAKKLIEER 642


>gi|94676542|ref|YP_588910.1| threonyl-tRNA synthetase [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
 gi|123081480|sp|Q1LT04|SYT_BAUCH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|94219692|gb|ABF13851.1| threonyl-tRNA synthetase [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
          Length = 642

 Score =  598 bits (1541), Expect = e-168,   Method: Composition-based stats.
 Identities = 270/647 (41%), Positives = 406/647 (62%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP  I +T  +G    F    +  ++A+ IS +  +  +A  +N ++ D  D + ++  +
Sbjct: 1   MPV-ITIT--NGLQLTFQKPVSSLEIAKYISSNCEQNCIASYLNNRLVDAVDLIMQDSKL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           +IIT ED   L ++R SC H++  A++ +WPE ++ IG II+ GFYYD D E     +++
Sbjct: 58  DIITAEDKAGLDILRCSCNHLLGHAIKQLWPEAKMTIGKIIDKGFYYDIDLEHKLQPEDI 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES-IPAKENVTLYRQGE 178
             +EK M  +  ++   +K+Y+S ++ARE+F++  E YKV IL+  I     V LY   E
Sbjct: 118 DALEKCMHTLANKNYNIVKKYVSWQQAREIFQANGEIYKVAILDDNINQHTLVALYYYEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPH  +      F KL K +  YWR +     L RIYGTAW T  +L  YL  L
Sbjct: 178 YVDMCRGPHAPNIRFCHHF-KLQKTSITYWRNNDKNKKLQRIYGTAWGTDMQLKCYLQSL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
           +E +KRDHRK+ +++DL+HI E+  G++FWH  GW IF+ L +++R K++   Y+E+ +P
Sbjct: 237 QEVKKRDHRKIGQQLDLYHIQEEAPGMVFWHVDGWIIFRELETFIRSKLQTYKYQEVKSP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW+Q+GHW +Y  ++F       T  + R + +KPMNCPGHV +FN  + SYR+
Sbjct: 297 VMIDRTLWEQTGHWSNYAEHIFT------TSSENREYCIKPMNCPGHVQIFNQQINSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS YRNEPSGSLHGLMRVR FTQDDAH+FCT+EQ+ +E      ++  +Y  
Sbjct: 351 LPLRMAEFGSCYRNEPSGSLHGLMRVRNFTQDDAHIFCTEEQVCDEINNNIKMLYEVYHT 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF+KI+V LSTRP  R+G+D +WD AE  +   L      + + I     +G GAFYGP
Sbjct: 411 FGFKKILVNLSTRPAHRIGNDKIWDKAEQDLATTL------TNNGILFKYNVGAGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D+  R WQCGTIQ+DF+LPSR  AFY+N ++++  PVMIHRA+ GS+ERFIGI
Sbjct: 465 KIEFTLLDSFDRAWQCGTIQLDFSLPSRLKAFYINKNNQRLVPVMIHRAILGSLERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE + G  P WL+P Q ++  I+ +   Y  ++   L + ++  + D RNE I +KIRE
Sbjct: 525 LIEEYAGFFPTWLAPTQVVLMNISDNQSNYVIQLMQKLSTANIRAKIDLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H+++++P ++ICGD+E     + IR           + + I  L  E
Sbjct: 585 HTLRRVPYMLICGDQEIKMGKVTIRTRYGKNLGMFEMNNFIEKLQHE 631


>gi|284045075|ref|YP_003395415.1| threonyl-tRNA synthetase [Conexibacter woesei DSM 14684]
 gi|283949296|gb|ADB52040.1| threonyl-tRNA synthetase [Conexibacter woesei DSM 14684]
          Length = 643

 Score =  597 bits (1540), Expect = e-168,   Method: Composition-based stats.
 Identities = 262/616 (42%), Positives = 389/616 (63%), Gaps = 25/616 (4%)

Query: 41  VAINGKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPI 99
           V ++G + DLS P+ +G+ +EI+TP    +L ++RH  AH++A AV  ++P V+++IGP 
Sbjct: 37  VKVDGALRDLSAPLHDGARLEIVTPSSDEALELLRHDTAHVLAAAVIDLYPGVKISIGPP 96

Query: 100 IEDGFYYDFDKEQ--PFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAY 157
           IE+GFYYDF+       S  +  +IE+KM+E +  D  F+++ +S  +A E F  + + Y
Sbjct: 97  IENGFYYDFEFPDGTVVSDADFERIEQKMREHVKADERFVREDVSVGEALERFVRENQPY 156

Query: 158 KVEILESIPAK-------ENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRG 210
           KVE++E +          E V+LY  G + DLCRGPH   T ++K F KL  VAGAYWRG
Sbjct: 157 KVELIEDLVKNADAGDPVETVSLYTNGPFTDLCRGPHGPGTKRIKAF-KLQSVAGAYWRG 215

Query: 211 DSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHR 270
           D++R ML+RIYGTA+ ++ +L  +L  LEE++KRDHR+L RE+ LF  +    G  FW  
Sbjct: 216 DASRTMLTRIYGTAFFSKDDLAAHLERLEEAKKRDHRRLGRELKLFQFSAVSPGSAFWLP 275

Query: 271 KGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
           +G  ++ +L+++ R       Y+E+ TP + D  LW+ SGHWD YR NMF       T  
Sbjct: 276 RGTSLWNSLVAFTREMNEPRGYQEVKTPLIFDSELWRTSGHWDKYRENMFV------THA 329

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
           + R  A+KPMNCPGH  +F     SYRELPVR +E G ++RNEPSG+LHGLMRVR F QD
Sbjct: 330 EDRDLAVKPMNCPGHAHLFRSQRHSYRELPVRYSEPGLLHRNEPSGTLHGLMRVRHFAQD 389

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMK 449
           DAH+FCT+EQ+  E +   +LI      FGFE I V+LSTRPE+R+G+D +WD AE  ++
Sbjct: 390 DAHIFCTEEQVHGEVVACLDLIFDTLGRFGFE-IDVELSTRPERRIGTDEMWDRAEGKLR 448

Query: 450 GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAF 509
             L+      Q  +   V  G+GAFYGPK ++ + D+IGR WQ GT+Q+D++ P RF   
Sbjct: 449 AALE------QQGLRYRVNEGDGAFYGPKIDFHVTDSIGRSWQLGTVQLDYSFPERFELT 502

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQ 569
           YV +   +  PVMIHRA  GS ERFIG++IE++ G  P+WL+P+QAIV  I     +YA+
Sbjct: 503 YVGADDREHRPVMIHRAAMGSYERFIGMLIEHWAGEFPVWLAPVQAIVLPIADRHADYAR 562

Query: 570 EIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           ++   L++  + +E D R E++  KIR+  ++KIP +++ GD+E     + +RR      
Sbjct: 563 DVVAQLRAARVRVELDDRTESVGRKIRDAELQKIPYMLVIGDREREAGEVALRRHREGDE 622

Query: 630 QKVSLLDAIPILTKES 645
             + + + +  +  E+
Sbjct: 623 GSLPVAEFVARVVSET 638


>gi|255560023|ref|XP_002521030.1| threonyl-tRNA synthetase, putative [Ricinus communis]
 gi|223539867|gb|EEF41447.1| threonyl-tRNA synthetase, putative [Ricinus communis]
          Length = 691

 Score =  597 bits (1540), Expect = e-168,   Method: Composition-based stats.
 Identities = 234/623 (37%), Positives = 366/623 (58%), Gaps = 24/623 (3%)

Query: 5   IKLTFPDGSIKNFPVH-ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           IK++ P+G++K      ++  D+A+ IS+SLA  A+   ++G + D++ P+     ++I 
Sbjct: 80  IKISLPNGTVKEGKRWISSPMDIAKEISKSLAANALIAQVDGVLWDMNRPLETNCELKIF 139

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII--EDGFYYD-FDKEQPFSSDEL 119
           T +         HS AHI+ ++++  +   ++ IGP     +GFYYD F  E   + +  
Sbjct: 140 TFDSDEGRDTFWHSSAHILGQSLEMEY-GCKLCIGPCTTRGEGFYYDAFYGELGLNEEHF 198

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IE    + +A   PF +  +S E+A E+F      +KVEI+  +PA + +T+YR G  
Sbjct: 199 KKIEAGALKAVAEKQPFERIEVSREEALEIFSENN--FKVEIINDLPADKTITVYRCGPL 256

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPH+ +T  VK F   +K + AYWRG+ +R  L R+YG ++  Q+ L +Y+  LE
Sbjct: 257 VDLCRGPHIPNTSFVKAF-ACLKASSAYWRGNKDRESLQRVYGISYPDQKRLKEYIQQLE 315

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E++K DHR L  + +LF   +   G  F+   G +I+  L+ ++R + ++  YEE+ +P 
Sbjct: 316 EAKKYDHRLLGTKQELFFCHQLSPGSWFFLPHGTRIYNKLMDFIRVQYRERGYEEVKSPN 375

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           + +  LW+ SGH  +Y+ NMF ++       + + F LKPMNCPGH  +F H ++SYREL
Sbjct: 376 IYNMKLWETSGHAANYKENMFLLEI------EKQEFGLKPMNCPGHCVIFQHRVRSYREL 429

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLA+FG ++RNE SG+L GL RVR F QDDAH+FC + Q+ +E   + N I   YK F
Sbjct: 430 PLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRETQIKDEVTGVLNFIDYAYKIF 489

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF   + KLSTRPEK +G  A W+ AE+ +K  LD      Q      +  G+GAFYGPK
Sbjct: 490 GFTYDL-KLSTRPEKYLGDLATWEKAESSLKSALDDFGKPWQ------INEGDGAFYGPK 542

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIGI 537
            +  + DA+ R +QC T+Q+DF LP RF   Y      ++  PVMIHRA+ GS+ER   I
Sbjct: 543 IDISVSDALNRKFQCATLQLDFQLPDRFELEYSAEDEAKRERPVMIHRAILGSVERMFAI 602

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           ++E++KG  P WLSP QAIV  ++  + EYA ++ + +      I+ D  +  I  K+RE
Sbjct: 603 LLEHYKGKWPFWLSPRQAIVCPVSEKSQEYAVQVQDQIHKAGYYIDVDLTDRKIQKKVRE 662

Query: 598 HSIKKIPIIIICGDKEASERSIG 620
             + +   I++ G++EA    + 
Sbjct: 663 AQLAQYNYILVVGEEEAKTGQVA 685


>gi|254556435|ref|YP_003062852.1| threonine-tRNA ligase 1 [Lactobacillus plantarum JDM1]
 gi|308180379|ref|YP_003924507.1| threonine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ST-III]
 gi|254045362|gb|ACT62155.1| threonine-tRNA ligase 1 [Lactobacillus plantarum JDM1]
 gi|308045870|gb|ADN98413.1| threonine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ST-III]
          Length = 654

 Score =  597 bits (1540), Expect = e-168,   Method: Composition-based stats.
 Identities = 232/654 (35%), Positives = 369/654 (56%), Gaps = 23/654 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           + I + FPDG+ K F    T   +A+SIS SLAK++VA   N ++ D   P+  +GSIEI
Sbjct: 2   ASINVKFPDGAEKQFDAGVTTEAIAKSISPSLAKRSVAGKFNDQIVDYRQPLTTDGSIEI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE----QPFSSD 117
           I  +    L V+R + A ++A AV+ ++P +    G    +GF++D D      +  S D
Sbjct: 62  IAADSEDGLNVLRQTAAQVLANAVKQLFPNIHFGSGEGNANGFFFDTDNPDEDGKQVSED 121

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +L  I  KM  II +D P  ++ LS   A  L         +    +    + V +Y+QG
Sbjct: 122 DLEAISDKMAAIIKQDLPIEREVLSKADALALVGDNPYQQDLVNERAAANNDQVVVYKQG 181

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           ++ DL  G  + STG+VK F KL+ VAGAYW+G S+ PML RIYGTA+  Q++L   L  
Sbjct: 182 DFVDLSDGAQLASTGKVKVF-KLLSVAGAYWQGKSSNPMLQRIYGTAFLKQKDLDADLKR 240

Query: 238 LEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEIN 295
            +E+ +RDHR +  E+DLF +    G+G+ +W   G  I + +  Y+  +++ + Y+ + 
Sbjct: 241 RQEARERDHRVIGNELDLFFVDPKVGNGLPYWMPNGATIRRQIERYIIDKEVANGYQHVY 300

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP + +  +++QSGHWD YR +MF          D     L+PMNCP H+ ++NH ++SY
Sbjct: 301 TPVLANLDVYKQSGHWDHYREDMFPPMDMG----DGEQLELRPMNCPSHIQIYNHHIRSY 356

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP+R+AE G ++R E SG+L GL RVR  T +D H F   +Q+  E  KI +L++ +Y
Sbjct: 357 RELPLRIAELGMMHRYEKSGALTGLSRVREMTLNDGHTFVALDQIEEEFKKILSLMVEVY 416

Query: 416 KDFGFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
           +DF       +LS R  +        DA+W+ ++ ++K  +D +       ++     GE
Sbjct: 417 EDFDISDYRFRLSYRDPENKEKYFDDDAMWERSQKMLKSAMDDMG------LDYFEAEGE 470

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
            AFYGPK +   K A+G +    TIQ+DF LP RF+  YV +  E+  PVMIHR +  ++
Sbjct: 471 AAFYGPKLDVQTKTALGGEETLSTIQLDFLLPERFDLKYVGADGEEHRPVMIHRGLVSTM 530

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITS-SAVEYAQEIANLLKSHHLSIETDFRNET 590
           ERF+  + E +KG  P WL+P Q  +  + + +   YA+ +   L +  + +  D RNE 
Sbjct: 531 ERFVAYLTEIYKGAFPTWLAPKQVTIIPVNNGAHGAYAETVRRRLAAEGVRVSIDDRNEK 590

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           + YKIRE   KK+P +++ GD+E +  S+ +R++G   T+  ++   I  +T+E
Sbjct: 591 MGYKIRESQTKKVPYLLVVGDQEVANGSVSVRKYGEERTESEAVDMFIGAITQE 644


>gi|302342263|ref|YP_003806792.1| threonyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
 gi|301638876|gb|ADK84198.1| threonyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
          Length = 627

 Score =  597 bits (1540), Expect = e-168,   Method: Composition-based stats.
 Identities = 265/633 (41%), Positives = 399/633 (63%), Gaps = 18/633 (2%)

Query: 18  PVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHS 76
               T +++        A++A+A  ++G++ DLS  V  +     I P +  +L ++RHS
Sbjct: 3   EQTITVAELIARADPKAARQALAAEVDGRLVDLSAEVSADAQARPILPGEAAALDLLRHS 62

Query: 77  CAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPF 136
            AHIMAEAV++++P V+V IGP IE+GFYYDF  E+ F+ D+L  IE KM++II  ++PF
Sbjct: 63  TAHIMAEAVRALFPGVKVGIGPAIENGFYYDFAYERAFAMDDLPAIEDKMRQIIKANTPF 122

Query: 137 LKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKK 196
           ++     E+ R LF  + E +KVE+++ +   + V+ Y QG + DLCRGPH+ STG+V  
Sbjct: 123 VRCEAPREEIRRLFADQGEQFKVELIDDL-HDQVVSTYGQGSFVDLCRGPHIPSTGRVGA 181

Query: 197 FFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLF 256
           F KL+ VAGAYWRGD  RPMLSRIYGTA+  + EL QYL+ LEE++KRDHRKL +E+DLF
Sbjct: 182 F-KLLSVAGAYWRGDEKRPMLSRIYGTAFFDKNELKQYLHMLEEAKKRDHRKLGKELDLF 240

Query: 257 HIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSY 314
              E+ G G++ WH +G  +   L  + RR+ ++  Y+ +  PQ+L + LW++SGH+D+Y
Sbjct: 241 SFHEEIGPGMVVWHNRGMMLRMVLEDFERREHLRRGYQIVQGPQLLKRELWERSGHYDNY 300

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
           R NM+  +       D   + +KPMNC  H+ ++   + SYR+LP+R+ E G+V+R+E S
Sbjct: 301 RENMYFTEV------DGTAYGVKPMNCLAHMLIYKSKMHSYRDLPIRMFELGTVHRHEKS 354

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
           G L GL RVR FTQDDAH+ C  +Q+  E + + + +  +   FGF+  M +LSTRP+K 
Sbjct: 355 GVLGGLTRVRAFTQDDAHILCRPDQLEGEIMGVMDFVGEVMAIFGFDYGM-ELSTRPDKS 413

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           +GSD  W+ A N ++  L+             +  G+GAFYGPK ++ LKDA+GR WQC 
Sbjct: 414 IGSDEDWERATNALRKALEASGRP------YEINEGDGAFYGPKIDFKLKDALGRQWQCA 467

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQ 554
           TIQ DF LP RF+  Y+     +  PVMIHR + GS+ERFIG++IE++ G  P WL+P Q
Sbjct: 468 TIQCDFTLPERFDLTYIAPDDSRQRPVMIHRVILGSLERFIGVLIEHYAGRFPFWLAPEQ 527

Query: 555 AIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
           A V T+T  A ++A+E+   LK+    +E D RNE +  K+RE  + K+P +++ GD+E 
Sbjct: 528 ARVLTVTERADDWAREVFAALKNAGYRVEMDLRNEKLGAKVREAQLLKVPYMLVIGDREV 587

Query: 615 SERSIGIRRFGSTTTQKVSLLDAIPILTKESLP 647
            ER +  R         + L   + +  +++ P
Sbjct: 588 DERQVAPRLRSGKNLPPLDLAGLLALFAEQARP 620


>gi|282855610|ref|ZP_06264924.1| threonine--tRNA ligase [Pyramidobacter piscolens W5455]
 gi|282586540|gb|EFB91794.1| threonine--tRNA ligase [Pyramidobacter piscolens W5455]
          Length = 640

 Score =  597 bits (1539), Expect = e-168,   Method: Composition-based stats.
 Identities = 266/617 (43%), Positives = 385/617 (62%), Gaps = 16/617 (2%)

Query: 33  SLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE 91
            L K AVA  ++G+  DL   +  +  ++ ITPE    + ++RHS AH++AEAV +++P 
Sbjct: 27  KLDKGAVAAFVDGEEKDLDVVIDHDAEVKPITPETEEGIEIVRHSTAHLLAEAVMNLYPA 86

Query: 92  VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFE 151
            +VAIGP I+DGFYYD +  +  S + L  +EK+M+ I  R  P  ++ +    A +LF 
Sbjct: 87  AKVAIGPTIKDGFYYDIEFPETVSEEILPALEKEMRRIAKRSIPLRRERVGVADAIKLFR 146

Query: 152 SKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGD 211
            + + YKVEILE +   E V LY Q ++ DLCRGPHV +T  +K F KL+ +AGAYWRGD
Sbjct: 147 ERNDPYKVEILEGV-GDETVNLYWQDDYVDLCRGPHVPNTRFLKHF-KLLSMAGAYWRGD 204

Query: 212 SNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRK 271
            +  ML+RIYGTA+NTQ+EL  Y+  +EE+ +RDHRKL +E+DLF +  +G G  F+H K
Sbjct: 205 EHNIMLTRIYGTAFNTQEELDAYITRMEEARRRDHRKLGKELDLFSLHNEGVGFPFFHPK 264

Query: 272 GWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G  +   L+S+ RR    + Y E  TPQ+L++ LW +SGHWD YR NM+       T  D
Sbjct: 265 GMVVMNKLMSFWRRLHFLNGYTEARTPQILNRDLWLRSGHWDHYRENMYF------TTID 318

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
               A+KPMNCPG + ++     SYRELP+R+ E G V+R+E SG+LHGLMRVR FTQDD
Sbjct: 319 DIPHAIKPMNCPGGIIIYKTSKHSYRELPIRMGELGVVHRHELSGALHGLMRVRCFTQDD 378

Query: 391 AHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKG 450
           AH FCT EQ+ +E   I  L   +Y      K  V+LSTRPE  +GSD LW+ AEN +  
Sbjct: 379 AHHFCTPEQIKDEVKLIMKLNDYVYTHVFGFKYHVELSTRPENSMGSDELWEIAENALSE 438

Query: 451 VLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFY 510
            L              +  G+GAFYGPK ++ L+D IGR WQCGTIQ+DF +P +F+  Y
Sbjct: 439 TLAETGTP------YVLNPGDGAFYGPKIDFHLEDCIGRTWQCGTIQLDFTMPEKFDMTY 492

Query: 511 VNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQE 570
           V +   +  PVM+HR + GSIERF+GI+IEN+ G  P WL+P+Q  +  ++   + YA+E
Sbjct: 493 VGADGREHRPVMLHRTILGSIERFMGILIENYAGAFPYWLAPVQVKLLAVSDDHLPYARE 552

Query: 571 IANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
           +A  L++ ++ +E D R+E +  KIR+  ++K+P +++ GDKE   R++ +R        
Sbjct: 553 VAEKLQNLNVRVEIDRRDEKLGRKIRDAQMEKVPYMLVIGDKEVEARTVAVRDRAKGDLG 612

Query: 631 KVSLLDAIPILTKESLP 647
            +       +L ++  P
Sbjct: 613 SMDFAAFTGLLAEQYDP 629


>gi|46199818|ref|YP_005485.1| threonyl-tRNA synthetase [Thermus thermophilus HB27]
 gi|73919837|sp|Q72HH1|SYT_THET2 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|46197445|gb|AAS81858.1| threonyl-tRNA synthetase [Thermus thermophilus HB27]
          Length = 659

 Score =  597 bits (1538), Expect = e-168,   Method: Composition-based stats.
 Identities = 263/657 (40%), Positives = 406/657 (61%), Gaps = 25/657 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           + +  PDG     P  AT  DVA ++     ++AV   ++G++ DL  P+ +G+ + ++T
Sbjct: 1   MTVYLPDGKPLELPEGATAKDVARALGEGWERRAVGAIVDGELYDLLKPLPQGAKVRLLT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPE-------VQVAIGPIIEDGFYYDFDKEQPFSS 116
            +DP    + RH+ AH++A+AV+  + E       V++ +GP+IE GFYYD +  +P S 
Sbjct: 61  EKDPEFQTLFRHTLAHVLAQAVKEFFREKGYDPESVRLGVGPVIEKGFYYDIEAPEPLSD 120

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
           ++L  IE KM+EI+ RD P  +  LS E+A   +   K+ YK E++  IP  E ++ Y+Q
Sbjct: 121 EDLPAIEAKMREILKRDLPLRRFVLSREEALARYRG-KDPYKTELILEIPEGEEISFYQQ 179

Query: 177 GE----WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELT 232
           G+    + DLCRGPHV STG++   FKL  VAGAYWRGD NRPML R+YG A+ T +EL 
Sbjct: 180 GDEAYGFTDLCRGPHVPSTGRIPPHFKLTHVAGAYWRGDENRPMLQRVYGVAFRTAEELK 239

Query: 233 QYLYFLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRRK-IKDD 290
           +YL+ LEE++KRDHR+L RE++LF I      G++ W  KG  + + L+++MR + ++  
Sbjct: 240 EYLWQLEEAKKRDHRRLGRELELFLIDPMVGKGLVLWLPKGNVVREELMAFMREEQVRRG 299

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH 350
           Y+ + TP +    L++ SGH+  Y  + F      +   +   + LKPMNCP H+ ++ +
Sbjct: 300 YQLVTTPHIGSLELYKTSGHYPYYAESQFPPISFKER-GEEEEYLLKPMNCPHHIRIYAY 358

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
             +SYRELP+RLAEFG+VYR E +G L GL RVRGFTQDDAH+FCT E++  E L + +L
Sbjct: 359 RKRSYRELPLRLAEFGTVYRYEKAGELLGLTRVRGFTQDDAHIFCTPEEVKGEFLGVLDL 418

Query: 411 IISIYKDFGFEKIMVKLSTRPEK---RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGV 467
           ++ ++   G +    ++  R  K    VG +A W  AE  ++        +++  +   V
Sbjct: 419 VLKVFATLGLKDYRARIGVRDPKSDKYVGDEAKWALAERQIEEA------AAEAGLRYTV 472

Query: 468 LLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAV 527
             G+ AFYGPK ++++KDA+GR+WQ GTIQVD+NLP RF   YV    E+  PVM+HRA 
Sbjct: 473 EEGDAAFYGPKLDFVVKDALGREWQLGTIQVDYNLPERFGLTYVGKDGEEHRPVMLHRAP 532

Query: 528 FGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR 587
           FGS+ERFIGI+IE+F G+ PLWL+P+QA+V  ++     YA+E+A  LK   L  E D R
Sbjct: 533 FGSLERFIGILIEHFAGDFPLWLAPVQAVVVPVSEKQEGYAREVAGRLKEAGLRAEADTR 592

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            E +  +IR+  ++K+P +++ G++E +E ++ +RR        + L   +    +E
Sbjct: 593 PERMQARIRDAEVQKVPYVLVVGEREKAEGAVSVRRRKKGNLGTMPLAAFLEGALRE 649


>gi|170095495|ref|XP_001878968.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164646272|gb|EDR10518.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 721

 Score =  596 bits (1537), Expect = e-168,   Method: Composition-based stats.
 Identities = 232/649 (35%), Positives = 362/649 (55%), Gaps = 25/649 (3%)

Query: 3   SDIKLTFPDGSIKNF-PVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIE 60
            +I +T PDGS +       +  DVA+ +S+SL+++ V   ++G++ DL  P+ +   +E
Sbjct: 76  EEIVITMPDGSERKGKSWETSPMDVAKEVSKSLSERIVIAKVDGELWDLDRPLEKACKLE 135

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDEL 119
           ++  E P    V  HS AH++ EA +  +    + +GP  ++GF+Y+   +E+P ++ + 
Sbjct: 136 LLDFEHPEGKKVFWHSSAHVLGEAAERHY-GCHLCLGPPTDEGFFYEMAIEERPVTNADY 194

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE-SIPAKENVTLYRQGE 178
             +EK  +  I     F +  +S EK  E+       YK  +++  +P   + T+YR G 
Sbjct: 195 PALEKVSEAAIKEKQKFERLVVSKEKLLEM--FNYNKYKQYLIQTKVPDGTSTTVYRCGP 252

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLC GPH+  TG++K F    K + +Y+ GD+N   L RIYG ++  +++L  Y  FL
Sbjct: 253 MVDLCVGPHIPHTGKIKAFMVT-KNSASYFLGDANNDSLQRIYGISFPDKKQLADYKVFL 311

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
            E+ KRDHRK+ ++ +LF   +   G  F+   G +I+ +L+  MR +  K  Y+E+ +P
Sbjct: 312 AEAAKRDHRKIGKDQELFFFNDLSPGSCFFLPHGTRIYNSLVELMRSEYFKRGYQEVISP 371

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  LW+ SGHW +Y+ +MF +        +   +ALKPMNCPGH  +F+   +SY+E
Sbjct: 372 NMYNSKLWETSGHWQNYKDDMFLLDV------EKEKWALKPMNCPGHCLIFDSRDRSYKE 425

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFG ++RNE SG+L GL RVR F QDD HVFC   Q+  E   + + +  IY  
Sbjct: 426 LPIRMAEFGIIHRNEASGALTGLTRVRRFVQDDTHVFCMPSQLEEEISMLFDFMQHIYGL 485

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF    ++LSTRP+  +G+   WD AE  +K  L+       D     +  G+GAFYGP
Sbjct: 486 FGF-DFRLELSTRPDNYLGTIETWDQAEAQLKLALEKHYPGKWD-----LNPGDGAFYGP 539

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  ++DA+ R +QC TIQ+DF LP RFN  Y ++      PV+IHRA+ GS+ERFI I
Sbjct: 540 KIDITIRDALRRSFQCATIQLDFQLPERFNLKYRSAEEAHNRPVIIHRAILGSLERFIAI 599

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E+F G  P W+SP Q +V  + +   EYA EI   L S  L  + D    T+  KIR 
Sbjct: 600 ITEHFAGKWPFWISPRQVLVIPVAAPYKEYAAEITERLTSLGLFADVDNGENTLPKKIRN 659

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTT----QKVSLLDAIPILT 642
             I +   I++ G +E   RS+ +R      T    + V L   +  L 
Sbjct: 660 GEIAQYNFILVVGQEELDARSVNVRNRDDVGTKAKGEMVPLNLIVEKLV 708


>gi|317131189|ref|YP_004090503.1| threonyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
 gi|315469168|gb|ADU25772.1| threonyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
          Length = 645

 Score =  596 bits (1536), Expect = e-168,   Method: Composition-based stats.
 Identities = 238/654 (36%), Positives = 368/654 (56%), Gaps = 25/654 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SI 59
           MP    +T  DGSI+     AT   +A+ +   L K   A  I GKV DL   +++G ++
Sbjct: 1   MP---NITLKDGSIRAVEPGATALALAKELGAGLYKAVCAARIGGKVVDLRTQLQDGDTL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           E++T +DP       H+ +HI+A+AV+ ++PEV++ IGP IEDGFYYDFD +  F+ +EL
Sbjct: 58  ELLTFDDPDGKKAFNHTASHILAQAVKRLYPEVKLTIGPAIEDGFYYDFDSDLSFTQEEL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPA-KENVTLYRQGE 178
           A+IE +M++I+  D P  +  L   +A +L E K E YKVE++       E ++ Y+QGE
Sbjct: 118 AKIEAEMKKIVKEDLPIERFTLPAPEAVKLMEEKSEPYKVELINEHAGKGEPISFYKQGE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + +LC GPH+  TG+VK F KL    GAYWRGD+   ML R+YGTA+  + EL  ++  L
Sbjct: 178 FTELCAGPHLPDTGRVKAF-KLTSSTGAYWRGDAKNKMLRRVYGTAFPKKAELDAHITML 236

Query: 239 EESEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINT 296
           EE+ KRDH KL RE+  F      G G+     KG ++ Q L  ++   + K  Y    T
Sbjct: 237 EEARKRDHNKLGRELGFFTTVDYIGQGLPVMLPKGSRVLQLLQRFVEDEEEKRGYLLTKT 296

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +    L++ SGHWD YR  MF +    D  KD   FAL+PM CP    V+ +  +SYR
Sbjct: 297 PLLAKSDLYKISGHWDHYRDGMFVL---GDEEKDDEVFALRPMTCPFQFQVYLNKKRSYR 353

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +LP+RL E  +++RNE SG +HGL+RVR FT  + H+ C  +Q+  E     +L   + K
Sbjct: 354 DLPMRLGETSTLFRNEASGEMHGLIRVRQFTISEGHIACRPDQLEEEFKGCVDLANFMLK 413

Query: 417 DFGFEKIMVKLSTR-----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
             G ++ +    ++      +K +G+   W++ ++ M+ +LD +       I      GE
Sbjct: 414 TVGLDEDVSYRFSKWDENDRDKYIGTSEQWEEVQDRMRNILDDLG------IQYTEASGE 467

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
            AFYGPK +  +++  G++    T+Q+DF L  RF   Y ++  ++ +P +IHR   G  
Sbjct: 468 AAFYGPKLDIQIRNVFGKEDTLITVQIDFQLAKRFEMKYTDTDGQEKYPYVIHRTSIGCY 527

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           ER + ++IE + G +P WL+P Q  V  I+     YAQ +   L++  L    D RNE I
Sbjct: 528 ERTLALLIEKYAGAMPTWLAPEQVRVLPISEKHEAYAQPVLEKLRAAGLRATVDQRNEKI 587

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRF-GSTTTQKVSLLDAIPILTKE 644
            Y+IRE  ++K+P +++ GD+EA E ++ +R   G   TQ V     +  + +E
Sbjct: 588 GYRIREAQLEKVPYMLVAGDREAEEGTVSVRARVGEGGTQTV--DAFLKDILQE 639


>gi|290989139|ref|XP_002677200.1| threonyl-tRNA synthetase [Naegleria gruberi]
 gi|284090806|gb|EFC44456.1| threonyl-tRNA synthetase [Naegleria gruberi]
          Length = 672

 Score =  596 bits (1536), Expect = e-168,   Method: Composition-based stats.
 Identities = 224/642 (34%), Positives = 364/642 (56%), Gaps = 23/642 (3%)

Query: 3   SDIKLTFPDGSIKNF-PVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIE 60
            +I +T PD S +       T  D+A SIS  LA   V   +NG + D+   +  + ++E
Sbjct: 36  KEITITLPDNSTRPGKAYETTPHDIAMSISAGLAANCVVAKVNGALWDMGRALEGDCTLE 95

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYD-FDKEQPFSSDE 118
           ++  + P +  V  HS +H+M EA++ ++ +  +  GP +EDG FYY+ +  +   S  +
Sbjct: 96  LLKFDHPEAKEVFWHSSSHVMGEAMEDVF-KCFLCKGPPLEDGGFYYEAYMGDNSVSETD 154

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQG 177
             +++  + +II    PF +  ++  +A EL       +KVEIL E +   +  ++YR G
Sbjct: 155 YPKVKDAVTKIINEKQPFERLLITKAEALEL--FADNKFKVEILSEKVKEGDYCSVYRCG 212

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
              D C+GPH+ +TG+V  F ++ K + +YWR D+++  L R+Y  ++  ++ + ++   
Sbjct: 213 RLIDPCKGPHLLNTGKVTTF-EVTKNSSSYWRADASKETLQRVYAMSFPDKKLMKEWQTL 271

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINT 296
           +EE++KRDHR + ++ +L+       G++F+   G ++F ++ S MR +     Y E+ T
Sbjct: 272 MEEAKKRDHRIIGKDQELWFFHPYAPGMVFFLPHGQRLFNSIQSLMRNEYWHRGYSEVQT 331

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P V    LW+ SGHWD Y  NMF ++       D    +LKPMNCP H  +F H  +SYR
Sbjct: 332 PNVFHSDLWKTSGHWDKYAENMFVLEI------DKAQHSLKPMNCPSHCLMFKHRTRSYR 385

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ELP+R A+FG ++RNE  G+L G+ R+R F QDDAH+FC  +Q+ +E +    ++  IYK
Sbjct: 386 ELPIRFADFGVLHRNELKGALTGMTRLRKFQQDDAHIFCRPDQIKSEIMGALRMMQDIYK 445

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
            FGF    + LSTRPEK +G  + WD+AE  ++  L+   +S Q         G+GAFYG
Sbjct: 446 IFGFG-FRLFLSTRPEKYLGEISQWDEAEGQLEAALNEFGHSWQK------NEGDGAFYG 498

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK + ++ DA+ R+ QC T+Q+DF LP RF+  Y      +  PV++HRA+FGS+ERF+ 
Sbjct: 499 PKIDILISDALKREHQCATVQLDFQLPIRFDLTYAAEDKTESRPVIVHRAIFGSLERFLA 558

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           I  E+F G  P WLSP QAIV  +++   EYA+++   L      ++ D  +  I+ KIR
Sbjct: 559 IATEHFGGKWPFWLSPRQAIVVPVSNKCNEYAEKVQKRLHEAKYYVDVDLSSNRIDKKIR 618

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
              + +   I++ G KE    S+ IR   S   Q V  ++ +
Sbjct: 619 NAQLSQYNYILVVGPKEMESDSVNIRIRDSDKEQGVKTIEEL 660


>gi|242278821|ref|YP_002990950.1| threonyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
 gi|259516380|sp|C6BRH1|SYT_DESAD RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|242121715|gb|ACS79411.1| threonyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
          Length = 642

 Score =  596 bits (1536), Expect = e-168,   Method: Composition-based stats.
 Identities = 264/636 (41%), Positives = 382/636 (60%), Gaps = 20/636 (3%)

Query: 12  GSIKNFPVHATGSDVA-ESISRSLAKKAVAVAINGKVCDLSDPVREGS--IEIITPEDPR 68
           G        A   +V  E++S+   K  V       + DL+  V      +E +  +   
Sbjct: 5   GKELEVQQGALCGEVLKEALSKKQFKNVVVAKCGDTLLDLTTTVPADCTDLEPVMADSKE 64

Query: 69  SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQE 128
            L VIRHS AH+MAEAV+ ++P  +V IGP I  GFYYDFD E+PF+ ++L  IE +M  
Sbjct: 65  GLEVIRHSTAHLMAEAVKKLFPTAKVTIGPSIASGFYYDFDYERPFTPEDLEAIEAEMLR 124

Query: 129 IIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
            +  +  F ++ LS   A + FE   E YK+E++  +  +E V++Y  GE+ DLCRGPHV
Sbjct: 125 RVGANEEFTREVLSSADALKKFEEMGEDYKIELINDL-GEETVSVYTNGEFADLCRGPHV 183

Query: 189 RSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRK 248
             TG +K F KL+ VAGAYWRGD NR  L RIYGTA+   + L ++L  +EE++KRDHRK
Sbjct: 184 ARTGMLKAF-KLLSVAGAYWRGDENRQQLQRIYGTAFPDPKALKKHLAQIEEAKKRDHRK 242

Query: 249 LAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQ 306
           L  ++DLF +  +   G+  WH KG  I   L  + R   +K  Y+ +  P +L + LW+
Sbjct: 243 LGTQLDLFSVNPEVGAGMTIWHPKGALIRAILEDFERKEHLKRGYQFVQGPLILKRELWE 302

Query: 307 QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFG 366
           +SGH+D+YR NM+       T  D +++ +KPMNC  H+ VF   L+SYR+LP R  E G
Sbjct: 303 KSGHYDNYRENMYF------TEIDEQSYGIKPMNCLSHMLVFKSRLRSYRDLPQRYFEHG 356

Query: 367 SVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK 426
            V+R+E SG LHGL+RVR FTQDDAH+ C  +Q+ +E + +   +  +   FGFE    +
Sbjct: 357 VVHRHEKSGVLHGLLRVRTFTQDDAHLICRPDQLRDEIIGVAKFVGDVMGLFGFEYEA-E 415

Query: 427 LSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDA 486
           +ST+PEK +GSD  WD A   ++G L  +       +   +  G+GAFYGPK + I+KDA
Sbjct: 416 VSTKPEKAIGSDEDWDRATEALEGALKEMG------MEYSINEGDGAFYGPKIDIIIKDA 469

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNL 546
           + R WQC TIQ DF LP RF+  YV    E+  PVM+HR + GSIERFIG+++E+  G L
Sbjct: 470 LERRWQCATIQCDFTLPERFDLSYVGEDGERHRPVMLHRVILGSIERFIGVLLEHTGGAL 529

Query: 547 PLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPII 606
           P WLSP+QA + T+T S  E+AQ++   L+   +  E D RNE + YK+RE  ++KIP +
Sbjct: 530 PAWLSPVQAKILTVTDSQNEFAQKVLQFLREKGIRAEVDDRNEKLGYKVREAQLEKIPYM 589

Query: 607 IICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           ++ GDKE +  S+ +R          SL +A  +++
Sbjct: 590 LVIGDKEVAAESVNVRARDGEDPGLKSLEEAAELIS 625


>gi|260655005|ref|ZP_05860493.1| threonine--tRNA ligase [Jonquetella anthropi E3_33 E1]
 gi|260630320|gb|EEX48514.1| threonine--tRNA ligase [Jonquetella anthropi E3_33 E1]
          Length = 623

 Score =  596 bits (1536), Expect = e-168,   Method: Composition-based stats.
 Identities = 257/614 (41%), Positives = 374/614 (60%), Gaps = 16/614 (2%)

Query: 36  KKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           K AVA  +  +  DL+  V  +  +  ITP+ P  L +IRHS AH++A+AV  ++P    
Sbjct: 16  KNAVAAFVGEEEKDLNIVVEKDAVLRPITPDIPEGLDIIRHSSAHLLADAVTRLFPGAVP 75

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
           AIGP+I+DGFYYD    QP S  +L +IEK+MQ I+ +  P  +  ++  +A +LF+ +K
Sbjct: 76  AIGPVIKDGFYYDIQFPQPISESDLPRIEKEMQRIVKKCVPLERISVTVPEAIQLFKERK 135

Query: 155 EAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNR 214
           + YKVEILE +     V +Y Q  + DLCRGPHV +T  ++   KL+ VAGAYWRGD + 
Sbjct: 136 DPYKVEILEGVT-DPQVNVYWQDTYVDLCRGPHVPNTKFLR-HVKLLSVAGAYWRGDEHN 193

Query: 215 PMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWK 274
            ML+RIYGT ++T + L  YL  +EE++KRDHRK+ +EMDLF   ++G G  F+H KG  
Sbjct: 194 IMLTRIYGTTFDTAEGLETYLKRMEEAKKRDHRKIGKEMDLFSFHKEGIGFPFFHPKGMV 253

Query: 275 IFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           +  +L+ + RR    + Y E  TP +L++ LW QSGHWD Y+ NM+       T  D   
Sbjct: 254 VMNSLLDFWRRLHTLNGYSEARTPMILNRDLWVQSGHWDHYQQNMYF------TTIDEMP 307

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
            A+KPMNCPG + ++   L SY+E P+RLAE G V+R+E +G LHGLMRVR FTQDDAH 
Sbjct: 308 CAIKPMNCPGGILIYKDRLHSYKEFPIRLAELGHVHRHEKTGELHGLMRVRSFTQDDAHH 367

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
           FCT EQ+ +E   I  L   +Y      K  V+LSTRP+  +GSD LW  AE  ++  L+
Sbjct: 368 FCTPEQIKDEVKFIMALDDYVYSKVFGFKYHVELSTRPDNSIGSDELWATAEKALQETLE 427

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS 513
                        +  G+GAFYGPK ++ L+D IGR WQCGTIQ+DF++P +F+  Y+  
Sbjct: 428 ETNTP------YVLNPGDGAFYGPKIDFHLEDCIGRTWQCGTIQLDFSMPEKFDMVYIGP 481

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIAN 573
             ++  PVM+HR + GSIERF+GI+IE + G  P W++P+Q  +  +  S V YA+++ +
Sbjct: 482 DGKEHRPVMLHRTILGSIERFMGILIEQYAGAFPYWMAPVQVKILPVNESHVAYAKDLKD 541

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            L      +E D  +E +  KIR   ++K+P +++ GDKE   +++ +R         VS
Sbjct: 542 QLADRGHRVEIDLSDEKLGKKIRNAQVEKVPFMLVIGDKEVENKTVALRDRAEGDKGSVS 601

Query: 634 LLDAIPILTKESLP 647
                 +L  +  P
Sbjct: 602 QEQLFELLANQYDP 615


>gi|160902301|ref|YP_001567882.1| threonyl-tRNA synthetase [Petrotoga mobilis SJ95]
 gi|189083616|sp|A9BHF0|SYT_PETMO RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|160359945|gb|ABX31559.1| threonyl-tRNA synthetase [Petrotoga mobilis SJ95]
          Length = 640

 Score =  595 bits (1535), Expect = e-168,   Method: Composition-based stats.
 Identities = 268/647 (41%), Positives = 413/647 (63%), Gaps = 23/647 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            +K+T+PD S++ F    T +++A+ IS  L + A+A  ING++ DL+ P+ ++ +I++I
Sbjct: 1   MVKITYPDNSVQEFKDGITPAEIAKGISEGLYRNAIAAEINGELKDLNTPIMQDSTIKLI 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPE--VQVAIGPIIEDGFYYDFDKE-QPFSSDEL 119
           T +D  +  + RH+ AHIMA+AV  I+ E  V++AIGP+IE+GFYYDFD E    S ++ 
Sbjct: 61  TLDDEIAPKIYRHTMAHIMAQAVARIFGEDRVKLAIGPVIENGFYYDFDIEGHNLSEEDF 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           ++IE++M++II  D   +++ ++ ++A ELF+   + YK+E++E +     +++Y QG++
Sbjct: 121 SKIEEEMKKIIKEDIKIIRKEVNKKEAIELFK--DQPYKLELIEELEED-TISVYFQGDF 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           +DLCRGPH+ STG VK F KL+ V+GAYWRGD    ML RIYGTA+  +++L  YL  +E
Sbjct: 178 YDLCRGPHLPSTGYVKYF-KLLSVSGAYWRGDEKNKMLQRIYGTAFPKKEQLDDYLNMIE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDG-SGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTP 297
           E+++RDHRKL  +++LF +  +   G+ F+   G  +   L++Y R+   K  Y E+ TP
Sbjct: 237 EAKRRDHRKLGPKLNLFMLQSEMAPGMPFFLPNGKIVLNELMAYSRQVHKKYGYVEVETP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           Q+++  LW QSGHWD Y+ NMF       T K+    A+KPMNCPGH+ ++ +   SYR+
Sbjct: 297 QIMNIKLWHQSGHWDHYKENMFF------TEKEDMPMAVKPMNCPGHILIYKNNFVSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+ EFG V+R E SG LHGL RVR FTQDDAH+FC   QM  E +K+  L   I+  
Sbjct: 351 LPIRMFEFGKVHRYERSGVLHGLFRVRAFTQDDAHIFCMPSQMEEEIIKVIQLTNEIFST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF+   + LST PE  +G    W+ A + +K  L+      +  +   +  GEGAFYGP
Sbjct: 411 FGFKYEAI-LSTMPEDHMGDIESWERATDALKKALE------KSNMEYRIDEGEGAFYGP 463

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K ++ + D++GR WQC TIQ+DF +P RF+  Y + +  +  PVMIHRA+FGS+ERF GI
Sbjct: 464 KIDFNVTDSLGRKWQCTTIQLDFQMPERFDMVYADENDAQKRPVMIHRAIFGSLERFFGI 523

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IENF G  P WLSP+Q  +  ++    E A++ + +L+   + +  +  + T+ YKIR 
Sbjct: 524 LIENFAGEFPTWLSPVQVSILPVSEKFNEEAKKFSRILEQEGIRVYVNDSDATVGYKIRN 583

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
             +KK+P +I+ G+KE +  +I IR     T + VS    I  +  E
Sbjct: 584 EQMKKVPYMIVFGEKEMNSDTINIRTRKGDTIENVSKERFIEEIKNE 630


>gi|326693745|ref|ZP_08230750.1| threonyl-tRNA synthetase [Leuconostoc argentinum KCTC 3773]
          Length = 654

 Score =  595 bits (1535), Expect = e-168,   Method: Composition-based stats.
 Identities = 232/655 (35%), Positives = 370/655 (56%), Gaps = 26/655 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           S+IKLTFPDG++K FP   T   VAESIS+SLAKK+V+  ++G    + D +   G  ++
Sbjct: 2   SEIKLTFPDGAVKEFPAGTTPLVVAESISKSLAKKSVSAKLDGAYVGMHDVIPASGDFQL 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSI--WPEVQVAIGPIIEDGFYYDFDKE--QPFSSD 117
           IT  D  +L ++RHS +H++A+A++ +  +  +   +GP IE+GFYYD D       + +
Sbjct: 62  ITMADDEALDLLRHSASHLLAQALKRLPKFANMHFGVGPFIENGFYYDTDNGAGNQVTVE 121

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           + A+IE  M +I   D P + + +S ++A  +     + YKVE++  +P    +T+  QG
Sbjct: 122 DFAEIEAMMHKIAKEDLPIVSREVSRDEALAM--FADDPYKVELISDLPEDATITIAVQG 179

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           +  +L +G  V STG +K F KL  VAGAYWRG S+ PM+ RIYG A   Q ++   L  
Sbjct: 180 DHVELDKGGLVPSTGWLKHF-KLTSVAGAYWRGKSSNPMMQRIYGIAEWKQADVEAELQR 238

Query: 238 LEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEIN 295
            EE+++RDHR + R+MDLF  +++ GSG+  W   G  I + +  Y+  +++ + Y+ + 
Sbjct: 239 REEAKERDHRTIGRDMDLFFTSQEVGSGLPVWLPNGATIRRQVERYITDKELANGYQHVY 298

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP + + +L++ SGHWD YR +MF          D     L+PMNCP H+ VF H  +SY
Sbjct: 299 TPVLSNLNLYKTSGHWDHYREDMFPPMDMG----DGEFLELRPMNCPSHIMVFKHKPRSY 354

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP+R+AE G ++R E SG+L GL RVR  T +D H F   E++  E   I  +++ +Y
Sbjct: 355 RELPIRIAELGMMHRYEKSGALTGLSRVREMTLNDGHTFVEPEKLEEEFKSILTMMMEVY 414

Query: 416 KDFGFEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
           +DF       +LS R      K    D +W+ ++  +K  +D +       ++     GE
Sbjct: 415 RDFNITDYRFRLSYRDPKNTEKYFDDDEMWEKSQAQLKRAMDDLG------LDYYEAEGE 468

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK-CHPVMIHRAVFGS 530
            AFYGPK +   K A+G +    TIQ+DF LP RFN  Y+ +  +    PVM+HR + G+
Sbjct: 469 AAFYGPKLDVQTKTALGNEETMSTIQLDFLLPERFNLTYIGADGQDNHRPVMLHRGIVGT 528

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNE 589
           +ERF   +IE +KG  P WL+P+Q  +  +   +   YA++I   L+   L    + ++ 
Sbjct: 529 MERFTAYLIEMYKGAFPTWLAPLQVQIIPVNLGAHGAYAEQIKKQLQDAGLRANVETKDA 588

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            + Y IRE    KIP  ++ GD E   +++ +R++G   T  + + D    +  +
Sbjct: 589 KMGYLIREAQTNKIPYTLVLGDSEVEGQTVTVRKYGEEKTTTMPIADFQAEILAD 643


>gi|227890560|ref|ZP_04008365.1| threonyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
 gi|227867498|gb|EEJ74919.1| threonyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
          Length = 649

 Score =  595 bits (1534), Expect = e-168,   Method: Composition-based stats.
 Identities = 233/655 (35%), Positives = 375/655 (57%), Gaps = 25/655 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M S IK+TFPD S+K F    T +++A+SIS SLAKKAVA  ++G   DL+ P+  +GSI
Sbjct: 1   MSS-IKITFPDNSVKEFDAGVTTAEIAKSISISLAKKAVAGKVDGNFVDLNQPLKEDGSI 59

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDE 118
           EIIT +    L V+  + A ++A A+  ++P ++  +G + E GFY+D D  E   +  +
Sbjct: 60  EIITKDSNDGLVVLWRTAAQVLANALHELYPNMKFGLGDVTEHGFYFDTDNSEGQVAETD 119

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN--VTLYRQ 176
             +I +KM EII  + P  +   S E+A  L     + Y+ E++  +  K N  V  Y+Q
Sbjct: 120 FEKISQKMSEIIKANLPIERVEFSEEEALNLV--SGDEYQEELVRDVANKNNGRVVAYKQ 177

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           G++ D+  G  + STG+VK F KL+ VAGAYW+G S+ PML RIYGTA+  Q++L   L 
Sbjct: 178 GDFIDITDGVVLSSTGEVKIF-KLLSVAGAYWKGASSNPMLQRIYGTAFYKQKDLDAELQ 236

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEI 294
             +E+ +RDHR +  E+DLF +      G+ +W   G  I + +  Y+  +++   ++ +
Sbjct: 237 RQKEARERDHRVIGNELDLFFVDPKVGAGLPYWMPNGATIRRVIERYIIDKEVAWGFQHV 296

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
            TP + + +L++QSGHWD YR +MF          D     L+PMNCP H+ V+NH  +S
Sbjct: 297 YTPVLANLNLYKQSGHWDHYREDMFPPMDMG----DGEMLELRPMNCPSHIQVYNHHKRS 352

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YRELP+R+AE G ++R E SG+L GL RVR  T +D H F   + + +E   +  L+  +
Sbjct: 353 YRELPLRIAELGMMHRYEKSGALTGLSRVREMTLNDGHDFIEPDHIEDEIKTLIKLMTEV 412

Query: 415 YKDFGFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
           Y DF       +LS R  K        D +W+ +++ +K  +D +       +      G
Sbjct: 413 YNDFDITDYRFRLSYRDPKNTEKYFDDDEMWEKSQSKLKAAMDDMG------LEYFEAEG 466

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           E AFYGPK +   K A+G +    TIQ+DF LP RF+  Y+ +  E+  PVM+HR +  +
Sbjct: 467 EAAFYGPKIDVQTKTALGGEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMVHRGIVST 526

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNE 589
           +ERF   + E +KG  P WL+P Q  +  + +   ++Y  ++++ L++H + +  D RNE
Sbjct: 527 MERFTAYLTEMYKGAFPTWLAPHQVDIIPVKNDLHMDYVNDLSSKLRAHGIRVTVDDRNE 586

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            + YKIR+  + KIP  ++ GD+E S  ++ +R++G   T  ++  +   +L ++
Sbjct: 587 KMGYKIRQAQVNKIPYTLVIGDEEVSNGTVTVRKYGEEKTNTMTKAEFKNLLFED 641


>gi|212704422|ref|ZP_03312550.1| hypothetical protein DESPIG_02477 [Desulfovibrio piger ATCC 29098]
 gi|212672143|gb|EEB32626.1| hypothetical protein DESPIG_02477 [Desulfovibrio piger ATCC 29098]
          Length = 648

 Score =  595 bits (1534), Expect = e-168,   Method: Composition-based stats.
 Identities = 266/636 (41%), Positives = 385/636 (60%), Gaps = 27/636 (4%)

Query: 25  DVAESISRSLA----KKAVAVAINGK----VCDLSD--PVREGSIEIITPEDPRSLAVIR 74
           DVA  + ++L+    K  VA  +  +    +CDLS   P +   I  +  + P  L++IR
Sbjct: 17  DVAAVLQKALSGKKFKSVVAARVTAEGTETLCDLSATVPAQCTDITPVYADSPEGLSMIR 76

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDS 134
           HS AH+MA AV+ ++P  +V IGP +E+GFYYDFD E+PFSS++   IE +MQ I+    
Sbjct: 77  HSTAHVMAAAVKKLYPSAKVTIGPAVENGFYYDFDVEKPFSSEDFPAIEAEMQRIVNERL 136

Query: 135 PFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQV 194
           PF++  +S   A E F    E +KVEI+E I   + V+LY  G++ DLCRGPHV  TG  
Sbjct: 137 PFVRTTMSKADAIEKFSKMGENFKVEIIEGI-EGDTVSLYTCGDFTDLCRGPHVPHTGFS 195

Query: 195 KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMD 254
           K   K++  AGAYWRGD   PMLSR+YGTA+  ++ L  YL  LEE+++RDHRKL RE+ 
Sbjct: 196 K-ASKILSAAGAYWRGDEKNPMLSRLYGTAFADEKALNAYLKQLEEAKRRDHRKLGRELG 254

Query: 255 LFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWD 312
            F   ED   G++FW  KG  +   L  + RR+  K +Y+ +  PQ+L    WQ+SGH+D
Sbjct: 255 FFTFHEDVAPGMVFWLPKGMMMRTILEDFWRREHIKRNYDLVQGPQLLRVETWQRSGHYD 314

Query: 313 SYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE 372
            YR NM+  +  DD       + +KPMNC  H+ ++ + L+SYR+LP R  E G V+R+E
Sbjct: 315 HYRQNMYFTQIEDD------QYGIKPMNCISHMLIYRNDLRSYRDLPQRYFELGVVHRHE 368

Query: 373 PSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
            SG+LHGL+RVR FTQDDAH+ CT EQ+  E L + +LI  +   FGF+   V +STRP+
Sbjct: 369 KSGTLHGLLRVRQFTQDDAHILCTPEQLEGEILGVIHLIRDLMHLFGFDY-KVGISTRPK 427

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
             +G+D  W+ A N +   +       +  +   +  G+GAFYGPK +  L D IGR+WQ
Sbjct: 428 DSIGTDEAWELATNALIEAVK------KADMPYEINEGDGAFYGPKIDVRLLDCIGREWQ 481

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
           C TIQVDF LP RF+  YV    E+  PVM+HRA+ GS+ERFIG++IE + G +P WL+P
Sbjct: 482 CSTIQVDFTLPERFDLTYVGQDGERHRPVMVHRAIMGSLERFIGVLIEQYAGAMPTWLAP 541

Query: 553 IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
            QA + T+T +  E A +    LK+  + +  D RNE + +K+RE  + K+P I++ G+K
Sbjct: 542 EQARILTVTDAHNEAALKACEELKALGIRVTADTRNEKLGFKVREAQLAKVPYILVVGEK 601

Query: 613 EASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
           EA    + +R          S+ +   ++  +S  P
Sbjct: 602 EAQAGGVNVRLRNGDNLGLKSVAEVAALIRTDSEEP 637


>gi|301300332|ref|ZP_07206537.1| threonine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
 gi|300852068|gb|EFK79747.1| threonine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
          Length = 649

 Score =  595 bits (1534), Expect = e-168,   Method: Composition-based stats.
 Identities = 233/655 (35%), Positives = 374/655 (57%), Gaps = 25/655 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M S IK+TFPD S+K F    T +++A+SIS SLAKKAVA  ++G   DL+ P+  +GSI
Sbjct: 1   MSS-IKITFPDNSVKEFDAGVTTAEIAKSISISLAKKAVAGKVDGNFVDLNQPLKEDGSI 59

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDE 118
           EIIT +    L V+  + A ++A A+  ++P ++  +G + E GFY+D D  E   +  +
Sbjct: 60  EIITKDSNDGLVVLWRTAAQVLANALHELYPNMKFGLGDVTEHGFYFDTDNSEGQVAETD 119

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN--VTLYRQ 176
             +I +KM EII  + P  +   S E+A  L     + Y+ E++  +  K N  V  Y+Q
Sbjct: 120 FEKISQKMSEIIKANLPIERVEFSEEEALNLV--SGDEYQEELVRDVANKNNGRVVAYKQ 177

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           G++ D+  G  + STG+VK F KL+ VAGAYW+G S+ PML RIYGTA+  Q++L   L 
Sbjct: 178 GDFIDITDGVVLSSTGEVKIF-KLLSVAGAYWKGASSNPMLQRIYGTAFYKQKDLDAELQ 236

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEI 294
             +E+ +RDHR +  E+DLF +      G+ +W   G  I + +  Y+  +++   ++ +
Sbjct: 237 RQKEARERDHRVIGNELDLFFVDPKVGAGLPYWMPNGATIRRVIERYIIDKEVAWGFQHV 296

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
            TP + +  L++QSGHWD YR +MF          D     L+PMNCP H+ V+NH  +S
Sbjct: 297 YTPVLANLSLYKQSGHWDHYREDMFPPMDMG----DGEMLELRPMNCPSHIQVYNHHKRS 352

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YRELP+R+AE G ++R E SG+L GL RVR  T +D H F   + + +E   +  L+  +
Sbjct: 353 YRELPLRIAELGMMHRYEKSGALTGLSRVREMTLNDGHDFIEPDHIEDEIKTLIKLMTEV 412

Query: 415 YKDFGFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
           Y DF       +LS R  K        D +W+ +++ +K  +D +       +      G
Sbjct: 413 YNDFDITDYRFRLSYRDPKNTEKYFDDDEMWEKSQSKLKAAMDDMG------LEYFEAEG 466

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           E AFYGPK +   K A+G +    TIQ+DF LP RF+  Y+ +  E+  PVM+HR +  +
Sbjct: 467 EAAFYGPKIDVQTKTALGGEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMVHRGIVST 526

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNE 589
           +ERF   + E +KG  P WL+P Q  +  + +   ++Y  ++++ L++H + +  D RNE
Sbjct: 527 MERFTAYLTEMYKGAFPTWLAPHQVDIIPVKNDLHMDYVNDLSSKLRAHGIRVTVDDRNE 586

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            + YKIR+  + KIP  ++ GD+E S  ++ +R++G   T  ++  +   +L ++
Sbjct: 587 KMGYKIRQAQVNKIPYTLVIGDEEVSNGTVTVRKYGEEKTNTMTKAEFKNLLFED 641


>gi|90961470|ref|YP_535386.1| threonyl-tRNA synthetase [Lactobacillus salivarius UCC118]
 gi|122993083|sp|Q1WUN2|SYT_LACS1 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|90820664|gb|ABD99303.1| Threonyl-tRNA synthetase [Lactobacillus salivarius UCC118]
          Length = 649

 Score =  595 bits (1534), Expect = e-168,   Method: Composition-based stats.
 Identities = 233/655 (35%), Positives = 375/655 (57%), Gaps = 25/655 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M S IK+TFPD S+K F    T +++A+SIS SLAKKAVA  ++G   DL+ P+  +GSI
Sbjct: 1   MSS-IKITFPDNSVKEFDAGVTTAEIAKSISISLAKKAVAGKVDGNFVDLNQPLKEDGSI 59

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDE 118
           EIIT +    L V+  + A ++A A+  ++P ++  +G + E GFY+D D  E   +  +
Sbjct: 60  EIITKDSNDGLVVLWRTAAQVLANALHELYPNMKFGMGDVTEHGFYFDTDNSESQVAETD 119

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN--VTLYRQ 176
             +I +KM EII  + P  +   S E+A  L     + Y+ E++  +  K N  V  Y+Q
Sbjct: 120 FEKISQKMSEIIKANLPIERVEFSEEEALNLV--SGDEYQEELVRDVANKNNGRVVAYKQ 177

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           G++ D+  G  + STG+VK F KL+ VAGAYW+G S+ PML RIYGTA+  Q++L   L 
Sbjct: 178 GDFIDITDGVVLSSTGEVKIF-KLLSVAGAYWKGASSNPMLQRIYGTAFYKQKDLDAELQ 236

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEI 294
             +E+ +RDHR +  E+DLF +      G+ +W   G  I + +  Y+  +++   ++ +
Sbjct: 237 RQKEARERDHRVIGNELDLFFVDPKVGAGLPYWMPNGATIRRVIERYIIDKEVAWGFQHV 296

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
            TP + + +L++QSGHWD YR +MF          D     L+PMNCP H+ V+NH  +S
Sbjct: 297 YTPVLANLNLYKQSGHWDHYREDMFPPMDMG----DGEMLELRPMNCPSHIQVYNHHKRS 352

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YRELP+R+AE G ++R E SG+L GL RVR  T +D H F   + + +E   +  L+  +
Sbjct: 353 YRELPLRIAELGMMHRYEKSGALTGLSRVREMTLNDGHDFIEPDHIEDEIKTLIKLMTEV 412

Query: 415 YKDFGFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
           Y DF       +LS R  K        D +W+ +++ +K  +D +       +      G
Sbjct: 413 YNDFDITDYRFRLSYRDPKNTEKYFDDDEMWEKSQSKLKAAMDDMG------LEYFEAEG 466

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           E AFYGPK +   K A+G +    TIQ+DF LP RF+  Y+ +  E+  PVM+HR +  +
Sbjct: 467 EAAFYGPKIDVQTKTALGGEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMVHRGIVST 526

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNE 589
           +ERF   + E +KG  P WL+P Q  +  + +   ++Y  ++++ L++H + +  D RNE
Sbjct: 527 MERFTAYLTEMYKGAFPTWLAPHQVDIIPVKNDLHMDYVNDLSSKLRAHGIRVTVDDRNE 586

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            + YKIR+  + KIP  ++ GD+E S  ++ +R++G   T  ++  +   +L ++
Sbjct: 587 KMGYKIRQAQVNKIPYTLVIGDEEVSNGTVTVRKYGEEKTNTMTKAEFKNLLFED 641


>gi|146420108|ref|XP_001486012.1| hypothetical protein PGUG_01683 [Meyerozyma guilliermondii ATCC
           6260]
 gi|146389427|gb|EDK37585.1| hypothetical protein PGUG_01683 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 719

 Score =  595 bits (1534), Expect = e-168,   Method: Composition-based stats.
 Identities = 246/661 (37%), Positives = 369/661 (55%), Gaps = 27/661 (4%)

Query: 3   SDIKLTFPDGSIK-NFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIE 60
            DIK+T  DGS++       T   +A  I +S +++ V   +NG + DL  P+ +  S+E
Sbjct: 70  KDIKITLKDGSVRVGTAYETTPLSIAIDIGKSFSERQVISKVNGTLWDLERPLEDDVSLE 129

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF---DKEQPFSSD 117
            +  + P   AV  HS AH++ E+ +     + +  GP  EDGF+YD    + E+  +  
Sbjct: 130 FLDFDHPEGKAVFWHSSAHVLGESCECHLGGL-ICYGPPTEDGFFYDVSFDNGERVITQG 188

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +   +EK   + I     F++  ++ E+  E+F+  K   K  I + IP   + T+YR G
Sbjct: 189 DFGNLEKVSTKAIKEKQKFVRLEMTKEQLLEMFKYNKYKVKF-ISDKIPDGTSSTVYRCG 247

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
              DLC GPH+  TG++K F KL+K + +Y+ GD+N   L RIYG ++  ++ + ++L F
Sbjct: 248 PLIDLCLGPHIPHTGKIKSF-KLLKNSSSYFLGDANNDSLQRIYGISFPDKKLMDEHLKF 306

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINT 296
           L+E+  RDHRK+ RE +LF   E   G  FW   G +I+  L+  MR +  + D++E+ T
Sbjct: 307 LKEAADRDHRKIGREQELFFFNEMSPGSAFWLPHGTRIYNRLVDLMRSEYIQRDFQEVIT 366

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P + +  LW+ SGHW +Y+ NMF      D+      F LKPMNCPGH  +F    +SYR
Sbjct: 367 PNMYNSKLWETSGHWGNYKENMFTFDVEKDS------FGLKPMNCPGHCLIFKSRERSYR 420

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ELP R+A+FG ++RNE SG+L GL RVR F QDDAH+FCT+EQ+ +E     + +  +Y 
Sbjct: 421 ELPWRVADFGVIHRNEFSGALSGLTRVRRFQQDDAHIFCTEEQIEDEIAGCFDFLQKVYG 480

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
            FGFE  M +LSTRPEK VG    W++AE  ++  L+      +  +N     G+GAFYG
Sbjct: 481 IFGFEFKM-ELSTRPEKYVGELETWNNAEAKLESALNKFLGEGKWELN----PGDGAFYG 535

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK + ++ DA+ R +QC TIQ+DF LP+RF   +    S    PVMIHRA+ GS+ER   
Sbjct: 536 PKIDIMISDALKRSFQCATIQLDFQLPNRFELEFKAETSSHARPVMIHRAILGSVERMAA 595

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLL-KSHHLSIETDFRNETINYKI 595
           I+ E+FKG  P WLSP Q +V  +     +YAQ I   L K H    + D    T+  K+
Sbjct: 596 ILTEHFKGRWPFWLSPRQILVVPVGVKYNDYAQSIQQKLSKDHAFYADVDLSGNTLQKKV 655

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFG----STTTQKVSLLDAIPILTKESLPPDCQ 651
           R   + +   I I G++E +E+S+ IR           + V   D +  L   SL  + +
Sbjct: 656 RSGQLLQYNFIFIVGEQEQAEQSVNIRNRDIQSEQGKNETVKFGDVVKQLK--SLRDELR 713

Query: 652 K 652
           K
Sbjct: 714 K 714


>gi|239623178|ref|ZP_04666209.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239522545|gb|EEQ62411.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 643

 Score =  595 bits (1534), Expect = e-168,   Method: Composition-based stats.
 Identities = 259/591 (43%), Positives = 380/591 (64%), Gaps = 19/591 (3%)

Query: 54  VREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQP 113
           + +GS++    E    L  IRH+ +H++A+AV+ ++PE ++AIGP I+DGFYYDFD+E  
Sbjct: 64  LPDGSVQ----EAEDELRAIRHTASHVLAQAVKRLYPETKLAIGPAIDDGFYYDFDREGG 119

Query: 114 FSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTL 173
           F+ ++L ++E +M +I+  + P     L  ++A    E K E YKVE+++ +P +E ++ 
Sbjct: 120 FTPEDLEKLEAEMTKIVKENLPVKPFVLPRDEAVRFMEEKSEPYKVELIQDLPDEETISF 179

Query: 174 YRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQ 233
           Y+QGE+ DLC GPH+  T  VK F KL  +AGAYWRG     ML+RIYGTA++ + +L  
Sbjct: 180 YQQGEFVDLCAGPHIMYTKGVKAF-KLTSIAGAYWRGSEKNKMLTRIYGTAFSNKTDLEN 238

Query: 234 YLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYE 292
           YL  +EE++KRDHRKL +E+ LF  AE+G G  F+  KG  +  TLI Y R    ++ Y+
Sbjct: 239 YLTMMEEAKKRDHRKLGKELGLFMFAEEGPGFPFFLPKGMTLKNTLIDYWREIHQREGYQ 298

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E++TP +L + LW+ SGHWD Y+ NM+       T+ D   +A+KPMNCPG + V+ +  
Sbjct: 299 EVSTPIILSRKLWENSGHWDHYKDNMYT------TVIDEEDYAVKPMNCPGGMLVYKNQP 352

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
            SYR+LP+R+ E G V+R+E SG LHGLMRVR FTQDDAH+F   +Q+ +E   +  LI 
Sbjct: 353 HSYRDLPLRVGELGLVHRHEKSGQLHGLMRVRCFTQDDAHIFMRDDQIEDEIKGVTRLIN 412

Query: 413 SIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
            +Y  FGFE   V+LSTRPE  +GSD  W+ A N +K  LD +       +   V  G+G
Sbjct: 413 EVYTQFGFEYF-VELSTRPEDSMGSDEDWEMATNGLKKALDDMG------LEYIVNEGDG 465

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           AFYGPK ++ L+D++GR WQCGTIQ+DF +P RF+  Y      K  P+MIHR  FGSIE
Sbjct: 466 AFYGPKIDFHLRDSLGRTWQCGTIQLDFQMPQRFDLEYTAEDGSKKRPIMIHRVCFGSIE 525

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
           RFIGI+IE+F G  P+WL+P+Q  V  ++  ++EYA  +   LK+  +  E D ++E + 
Sbjct: 526 RFIGILIEHFAGKFPVWLAPVQVKVIPVSEKSMEYATGVYEKLKAAGIRTELDHKDEKVG 585

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           YKIR+  ++K+P +++ G+KEA+E +I +R           L D I  + K
Sbjct: 586 YKIRQAQLEKVPYMLVLGEKEAAEGAITVRSRDKGDLGAAVLEDFIADIKK 636


>gi|150015183|ref|YP_001307437.1| threonyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
 gi|149901648|gb|ABR32481.1| threonyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
          Length = 643

 Score =  594 bits (1532), Expect = e-167,   Method: Composition-based stats.
 Identities = 241/649 (37%), Positives = 360/649 (55%), Gaps = 20/649 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEII 62
            IK+T  DGSIK F    +  ++A+SIS  LA+ A    +NGKV DL   + E   + I 
Sbjct: 1   MIKVTLKDGSIKEFEASLSIYEIAKSISEGLARNACCGIVNGKVEDLRKEINEDVELSIC 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +       +RHS +H++A AV+ ++PE ++AIGP I  GFYYDFD+E  F++ +L ++
Sbjct: 61  TFDSQEGKDALRHSISHVLAYAVKRLFPETKLAIGPSIATGFYYDFDRESAFTAADLEKL 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +MQ+II  +    +  L   +A EL +   E YKVE++  +P  E ++ Y+ G++ DL
Sbjct: 121 EAEMQKIIKENPEISRFELPRNEALELMK--DEPYKVELINDLPENEIISFYKMGDFTDL 178

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPH+ S   VK   KL + AGAYW+G+    ML+RIYGTA+  + +L  +L  LEE++
Sbjct: 179 CAGPHLMSIKSVK-AIKLTRSAGAYWKGNEKNKMLTRIYGTAFLKKSDLDAFLEALEEAK 237

Query: 243 KRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVL 300
           KRDH KL RE+ LF   E+   G+     KG KI Q L  ++   + K  Y    TP + 
Sbjct: 238 KRDHNKLGRELKLFTTDENVGQGLPLLMPKGAKIVQLLQRWVEDEEEKRGYLLTKTPLMA 297

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
              L++ SGHWD Y+  MF +    D  KD   FAL+PM CP    ++N    SYR+LP+
Sbjct: 298 KSDLYKISGHWDHYKDGMFVL---GDEEKDDEVFALRPMTCPFQYTIYNAEQHSYRDLPL 354

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R  E  +++RNE SG +HGL+RVR FT  D H+  T EQ+  E   +  LI  +    G 
Sbjct: 355 RYGETSTLFRNEASGEMHGLIRVRQFTLADGHLVVTPEQLEEEFKGVLELIQYLMGTLGI 414

Query: 421 EKIMVKL-----STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
            + +            EK +     W+  ++ M+ +LD +       IN      E AFY
Sbjct: 415 AEKITYRFSKWDPNNTEKYINDPDAWNKTQDTMRNILDHLN------INYVEADDEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +   ++  G++    T+Q+DF L  RF+  YV+   EK  P +IHR+  G  ER +
Sbjct: 469 GPKLDLQFRNVHGKEDTLFTVQIDFALAERFDMSYVDKDGEKKRPYIIHRSSIGCYERTL 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE + G  P WLSP+QA V  I+    +YA+ +   LK+  + +ETD+R E I YKI
Sbjct: 529 AMLIEEYAGAFPTWLSPVQAKVLPISDKYNDYAEAVTKALKNKGIRVETDYRAEKIGYKI 588

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           RE  +++ P I++ G+KEA+   + +R   +     V L   I  + KE
Sbjct: 589 REARLERTPYILVVGEKEAANNEVSVRSRKNDDEGAVKLDAFIERIVKE 637


>gi|154300294|ref|XP_001550563.1| hypothetical protein BC1G_11336 [Botryotinia fuckeliana B05.10]
 gi|150856659|gb|EDN31851.1| hypothetical protein BC1G_11336 [Botryotinia fuckeliana B05.10]
          Length = 787

 Score =  594 bits (1532), Expect = e-167,   Method: Composition-based stats.
 Identities = 244/692 (35%), Positives = 365/692 (52%), Gaps = 64/692 (9%)

Query: 3   SDIKLTFPDGSIKN-FPVHATGSDVAESISRSLAKKAVAVAING---KVCDLSDPVR-EG 57
             I +T  DGS+K       T + +AE IS+SL K+ V   +NG   ++ DL  P+  + 
Sbjct: 81  DPITITLADGSVKEGIAWETTPAQIAEGISKSLLKRTVVAKLNGDSEQLWDLERPLEKDC 140

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ--PFS 115
           ++E++  E+     V  HS AHI+ EA +  +    + IGP I++GFYY+         +
Sbjct: 141 TLELLPFENEEGRRVFWHSSAHILGEASERRF-GCSLCIGPPIDNGFYYEMGLPNQGTVT 199

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES-IPAKENVTLY 174
             +   +E  + +I+     F +  LS +   E+F+     YK  I++  I    N T+Y
Sbjct: 200 DADWKPLETLVGQIVKEKQKFERLVLSKDDLLEMFK--DNKYKQHIIKDKIADGTNTTVY 257

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
           R G   DLCRGPHV +TG+++ F  +MK + +Y+ G+     L RIYG ++  ++++ ++
Sbjct: 258 RNGPLIDLCRGPHVPNTGRIETF-AIMKNSASYFLGNKENDSLQRIYGVSFPDKKQMAEH 316

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEE 293
             FLEE+ KRDHRKL ++ +LF   E   G   W   G +I+ T++S++R +     YEE
Sbjct: 317 KKFLEEAAKRDHRKLGKDQELFFFHEMSPGSAMWLPHGARIYNTIMSFLREQYWTRGYEE 376

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           + TP + +  LW+ SGHW  Y+ +MF      DT      FALKPMNCPGH  +F H  +
Sbjct: 377 VITPNMYNSELWKTSGHWAYYKDDMFTFPVEKDT------FALKPMNCPGHCLMFGHRER 430

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           S+RELP R+A+FG ++RNE SG+L GL RVR F QDDAH+FC ++Q+ +E   + + + +
Sbjct: 431 SHRELPWRVADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCREDQIKDEITGLFDFLKA 490

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           IY   GF   +  LSTRPEK +G    WD AE  ++  LD    ++   +   +  G+GA
Sbjct: 491 IYGLLGFTFKLN-LSTRPEKYLGKLETWDMAEEKLRSALDEF-AATDGGVPWVLNEGDGA 548

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC--------------- 518
           FYGPK +  + D + R+WQC TIQ+DF LP  F   Y                       
Sbjct: 549 FYGPKIDITICDVLKREWQCATIQLDFQLPQNFGLEYNTGDVPTKKDEEAVKEPVVKPKK 608

Query: 519 ------------------------HPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQ 554
                                    PVMIHRA+ GSIERF  I+IE+F G  P WLSP Q
Sbjct: 609 TTEPEDPNAPPKERVYKPLTPGCARPVMIHRAMAGSIERFTAILIEHFAGKWPFWLSPRQ 668

Query: 555 AIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
            +V  +     EYA+E+ ++     + I+ D    T+  KIR   + +   I + GD E 
Sbjct: 669 ILVIPVGVGYFEYAKEVQSIFHKQQMFIDVDLSGNTLQKKIRTGQLAQYNFIFVVGDTEM 728

Query: 615 SERSIGIRRFGSTTTQK----VSLLDAIPILT 642
             R + +R    T++Q     VSL +AI  LT
Sbjct: 729 KGREVNVRNRDDTSSQDRGKPVSLQEAIEKLT 760


>gi|187932904|ref|YP_001884583.1| threonyl-tRNA synthetase [Clostridium botulinum B str. Eklund 17B]
 gi|238691610|sp|B2TIT5|SYT_CLOBB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|187721057|gb|ACD22278.1| threonine--tRNA ligase [Clostridium botulinum B str. Eklund 17B]
          Length = 643

 Score =  594 bits (1531), Expect = e-167,   Method: Composition-based stats.
 Identities = 243/649 (37%), Positives = 366/649 (56%), Gaps = 20/649 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEII 62
            IK+T  DGS+K F    +  ++A+SIS  LA+ A    +NGKVCDL + V+E  S+ I 
Sbjct: 1   MIKVTLKDGSVKEFEAGLSVYEIAKSISEGLARNACCGVVNGKVCDLREEVKEDVSLSIC 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +       +RHS +H++A AV+ ++PE ++AIGP I  GFYYDFDK+  FS+ +L ++
Sbjct: 61  TFDSQEGKDAVRHSISHVLAYAVKRLFPETKLAIGPSIATGFYYDFDKDVAFSAQDLEKL 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M++II  +    K  L   +A EL +   E YKVE++  +   E ++ Y+ GE+ DL
Sbjct: 121 EAEMKKIIKENPSIEKFELPRNEALELMK--DEPYKVELINDLGEDEIISFYKLGEFTDL 178

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPHV S   +K   KL++ AGAYW+GD    ML+RIYGTA+  + EL +YL  +EE++
Sbjct: 179 CAGPHVMSLKPIK-AIKLIRSAGAYWKGDEKNKMLTRIYGTAFLKKSELDEYLDAVEEAK 237

Query: 243 KRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVL 300
           KRDH KL RE+ LF   E+   G+     KG KI QTL  ++   + +  Y    TP + 
Sbjct: 238 KRDHNKLGRELKLFTTDENVGQGLPLLMPKGAKIVQTLQRWVEDEEERRGYVLTKTPLMA 297

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
              L++ SGHWD Y+  MF +    D  KD   FAL+PM CP    ++N    SYR+LP+
Sbjct: 298 KSDLYKISGHWDHYKDGMFVL---GDEEKDEEVFALRPMTCPFQYTIYNAEQHSYRDLPI 354

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R  E  +++RNE SG +HGL+RVR FT  D H+  T EQ+  E   +  LI  + K  G 
Sbjct: 355 RYGETSTLFRNESSGEMHGLIRVRQFTLADGHLIVTPEQLEEEFKGVLELIQYLMKTLGI 414

Query: 421 EKIMVKL-----STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           ++ +            EK +     W+  ++ M+ +LD +K      IN      E AFY
Sbjct: 415 DEDISYRFSKWDPNNTEKYINDPEAWNKTQDTMRTILDHLK------INYVEADDEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +   ++  G++    T+Q+DF L  RF+  Y++ + EK  P +IHR+  G  ER +
Sbjct: 469 GPKLDLQCRNVHGKEDTLFTVQIDFALAERFDMSYIDKNGEKKRPYIIHRSSIGCYERTL 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE + G  P WLSP+Q  V  I+    +YA+ +   L++  + IE D+R E I YKI
Sbjct: 529 AMLIEKYAGAFPTWLSPVQVKVLPISDKYNDYAESVVKSLRNKGVRIEADYRAEKIGYKI 588

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           RE  +++ P I++ G+KEA+   + +R   +     + L      L  E
Sbjct: 589 REARLERTPYILVVGEKEAANNEVSVRSRKNDDEGAIKLDAFTERLLNE 637


>gi|28378228|ref|NP_785120.1| threonine--tRNA ligase 1 [Lactobacillus plantarum WCFS1]
 gi|38258333|sp|Q88WU9|SYT_LACPL RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|28271063|emb|CAD63968.1| threonine--tRNA ligase 1 [Lactobacillus plantarum WCFS1]
          Length = 654

 Score =  594 bits (1531), Expect = e-167,   Method: Composition-based stats.
 Identities = 231/654 (35%), Positives = 368/654 (56%), Gaps = 23/654 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           + I + FPDG+ K F    T   +A+SIS SLAK++VA   N ++ D   P+  +GSIEI
Sbjct: 2   ASINVKFPDGAEKQFDAGVTTEAIAKSISPSLAKRSVAGKFNDQIVDYRQPLTTDGSIEI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE----QPFSSD 117
           I  +    L V+R + A ++A A + ++P +    G    +GF++D D      +  S D
Sbjct: 62  IAADSEDGLNVLRQTAAQVLANAGKQLFPNIHFGSGEGNANGFFFDTDNPDEDGKQVSED 121

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +L  I  KM  II +D P  ++ LS   A  L         +    +    + V +Y+QG
Sbjct: 122 DLEAISDKMAAIIKQDLPIEREVLSKADALALVGDNPYQQDLVNERAAANNDQVVVYKQG 181

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           ++ DL  G  + STG+VK F KL+ VAGAYW+G S+ PML RIYGTA+  Q++L   L  
Sbjct: 182 DFVDLSDGAQLASTGKVKVF-KLLSVAGAYWQGKSSNPMLQRIYGTAFLKQKDLDADLKR 240

Query: 238 LEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEIN 295
            +E+ +RDHR +  E+DLF +    G+G+ +W   G  I + +  Y+  +++ + Y+ + 
Sbjct: 241 RQEARERDHRVIGNELDLFFVDPKVGNGLPYWMPNGATIRRQIERYIIDKEVANGYQHVY 300

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP + +  +++QSGHWD YR +MF          D     L+PMNCP H+ ++NH ++SY
Sbjct: 301 TPVLANLDVYKQSGHWDHYREDMFPPMDMG----DGEQLELRPMNCPSHIQIYNHHIRSY 356

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP+R+AE G ++R E SG+L GL RVR  T +D H F   +Q+  E  KI +L++ +Y
Sbjct: 357 RELPLRIAELGMMHRYEKSGALTGLSRVREMTLNDGHTFVALDQIEEEFKKILSLMVEVY 416

Query: 416 KDFGFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
           +DF       +LS R  +        DA+W+ ++ ++K  +D +       ++     GE
Sbjct: 417 EDFDISDYRFRLSYRDPENKEKYFDDDAMWERSQKMLKSAMDDMG------LDYFEAEGE 470

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
            AFYGPK +   K A+G +    TIQ+DF LP RF+  YV +  E+  PVMIHR +  ++
Sbjct: 471 AAFYGPKLDVQTKTALGGEETLSTIQLDFLLPERFDLKYVGADGEEHRPVMIHRGLVSTM 530

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITS-SAVEYAQEIANLLKSHHLSIETDFRNET 590
           ERF+  + E +KG  P WL+P Q  +  + + +   YA+ +   L +  + +  D RNE 
Sbjct: 531 ERFVAYLTEIYKGAFPTWLAPKQVTIIPVNNGAHGAYAETVRRRLAAEGVRVSIDDRNEK 590

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           + YKIRE   KK+P +++ GD+E +  S+ +R++G   T+  ++   I  +T+E
Sbjct: 591 MGYKIRESQTKKVPYLLVVGDQEVANGSVSVRKYGEERTESEAVDMFIGAITQE 644


>gi|210615498|ref|ZP_03290625.1| hypothetical protein CLONEX_02841 [Clostridium nexile DSM 1787]
 gi|210150347|gb|EEA81356.1| hypothetical protein CLONEX_02841 [Clostridium nexile DSM 1787]
          Length = 657

 Score =  594 bits (1530), Expect = e-167,   Method: Composition-based stats.
 Identities = 236/656 (35%), Positives = 362/656 (55%), Gaps = 18/656 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K+T  DGS+K +    +  ++A  IS  LA+ A A  +NG+V DL   V  +  + I+T
Sbjct: 4   MKITLKDGSVKEYAESKSVYEIALDISEGLARAACAGEVNGEVVDLRTVVSEDCELNILT 63

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
             D + LA +RH+ +H++AEAV+ ++PE ++AIGP I+ G+YYDF+   PFS+++L  IE
Sbjct: 64  ANDEKGLAALRHTASHVLAEAVKRLYPEAKLAIGPSIDTGYYYDFEH-APFSNEDLETIE 122

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M++II   +   +  L   +A  L E K E YKVE++  +P    ++ YRQGE+ DLC
Sbjct: 123 KEMKKIIKEGAKIERFELPRAEAIALMEEKGEPYKVELINDLPEDSVISFYRQGEFVDLC 182

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+ ST  VK F KL+  +GAYWRG+ N  ML+RIYGTA++ + EL  ++  LE+ +K
Sbjct: 183 AGPHLMSTKGVKAF-KLISSSGAYWRGNENNKMLTRIYGTAYSKKDELKAHMEHLEDIKK 241

Query: 244 RDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLD 301
           RDH KL REM+LF      G G+     KG  + QT+  ++   + +  Y    TP +  
Sbjct: 242 RDHNKLGREMELFTTVDVIGQGLPLLMPKGAAMVQTMQRWIEDEEERRGYMRTKTPLMAK 301

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + L+  S HW  Y+  MF +   D+  +    FAL+PM CP    V+    KSYR+LP R
Sbjct: 302 KDLYVISDHWGHYKEGMFVL--GDEEKEGEEVFALRPMTCPFQYYVYKQSQKSYRDLPCR 359

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
             E  +++RNE SG +HGL RVR FT  + H+    +Q+ +E     +L        G E
Sbjct: 360 YGETSTLFRNEDSGEMHGLTRVRQFTISEGHLVIRPDQVEDEFKGCVDLAKYCLTTLGVE 419

Query: 422 KIMVKL-----STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           + +            +K +G+  +WD+ E++M+ +LD ++      IN     GE AFYG
Sbjct: 420 EDVTYRLSLADPDNMDKYLGTREMWDEVEDVMRKMLDHLE------INYTEETGEAAFYG 473

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK +   K+  G++    TIQ+D  L  RF+  +V+   EK  P +IHR   G  ER + 
Sbjct: 474 PKLDIQAKNVYGKEDTMITIQLDMFLAERFDMTFVDKDGEKKRPYIIHRTAMGCYERTLA 533

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
            +IE + G  P WL P Q  V  I+    +YA ++AN L+ + +    D R E I YKIR
Sbjct: 534 WLIEKYAGLFPTWLCPEQVRVLPISEKYHDYANKVANELRGNGVKCTVDERAEKIGYKIR 593

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           E  + ++P +++ G KE  E  + +R        +  L   I  + KE    + +K
Sbjct: 594 ETRLDRVPYMLVVGAKEEEEGVVSVRSRYLGDEGQKPLDTFINDICKEIRTKEIRK 649


>gi|94986656|ref|YP_594589.1| threonyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00]
 gi|122988800|sp|Q1MRV8|SYT_LAWIP RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|94730905|emb|CAJ54268.1| Threonyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00]
          Length = 642

 Score =  594 bits (1530), Expect = e-167,   Method: Composition-based stats.
 Identities = 259/618 (41%), Positives = 378/618 (61%), Gaps = 19/618 (3%)

Query: 35  AKKAVAVAINGKVCDLSDPVREGSIE--IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEV 92
           +K  V   ING + DL  P+   + E   IT +    L ++RHS AHI+A AV++++P V
Sbjct: 29  SKNIVGYNINGSIIDLFTPLPTITKEVIPITIDSEDGLEMLRHSAAHILAAAVKNLFPTV 88

Query: 93  QVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFES 152
           +++IGP IE+GFYYDFD E+PF+ ++   IE +MQ II    PF +  +S  +A E F S
Sbjct: 89  KISIGPSIENGFYYDFDAERPFTPEDFPAIEAEMQRIINESIPFERIEISKAEALEFFSS 148

Query: 153 KKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDS 212
             E YKVEI+ S+    N+TLYR G + DLC+GPHV +T  +K F KL+ VAGAYWRG+ 
Sbjct: 149 LHENYKVEIINSL-EDGNITLYRIGNFTDLCKGPHVPNTNFIKAF-KLLSVAGAYWRGNE 206

Query: 213 NRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRK 271
           N  MLSRIY TA+  ++ L  YL  LEE+++RDHRKL +E++LF   ED   G++FW   
Sbjct: 207 NNQMLSRIYATAFPNKKLLKTYLTQLEEAKRRDHRKLGKELNLFEFHEDIAPGMVFWQPN 266

Query: 272 GWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G  +   L  ++R   +K  Y+ +  PQ+L + LW++SGH+ +Y+ NM+  +  +D    
Sbjct: 267 GMLLRTILEDFLRKEHLKRGYQLVQGPQLLRRELWEKSGHYTNYKENMYFTEIEEDV--- 323

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
              + +KPMNC  H+ ++   L SYRELP R  E G V+R+E SG LHGL+RVR FTQDD
Sbjct: 324 ---YGIKPMNCVSHMLLYKTHLHSYRELPQRYFELGVVHRHEKSGVLHGLLRVRQFTQDD 380

Query: 391 AHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKG 450
           AH+ C  EQ+  E +++   +  +   F F   +V +STRPEK +GSD  W+ A + +  
Sbjct: 381 AHIICMPEQLEEEIIQVITFVRDLMSLFDFNYHIV-ISTRPEKSIGSDYAWELATSALIQ 439

Query: 451 VLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFY 510
            ++ I       +   +  G+GAFYGPK +  + DAIGR+WQ  TIQ DF LP RF   Y
Sbjct: 440 AVEKIN------LPYSINHGDGAFYGPKIDIKVTDAIGREWQLSTIQCDFTLPERFELEY 493

Query: 511 VNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQE 570
           V    ++  PVMIHRA+FGSIERFIGI+ E++ G  P WL+PIQ  + T+T +   +A+ 
Sbjct: 494 VGQDGKRHQPVMIHRAIFGSIERFIGILTEHYAGAFPTWLTPIQVKILTVTDAQTPFAKH 553

Query: 571 IANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
           + + L+   + +  D RNE + +KIRE  + KIP I++ G KE    S+ +R        
Sbjct: 554 VYSQLQDVGIRVGLDIRNEKLGFKIREAQLAKIPYILVIGQKELELESVNVRLRTGENIG 613

Query: 631 KVSLLDAIPILTKESLPP 648
             S+ + I ++  + + P
Sbjct: 614 MQSVTEFIKLVENDCIQP 631


>gi|154495989|ref|ZP_02034685.1| hypothetical protein BACCAP_00272 [Bacteroides capillosus ATCC
           29799]
 gi|150274872|gb|EDN01928.1| hypothetical protein BACCAP_00272 [Bacteroides capillosus ATCC
           29799]
          Length = 586

 Score =  594 bits (1530), Expect = e-167,   Method: Composition-based stats.
 Identities = 257/584 (44%), Positives = 362/584 (61%), Gaps = 15/584 (2%)

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T E+P       H+C+HI+A+AV+ ++PEV++AIGP I++GFYYD D   PF+ + L QI
Sbjct: 9   TFENPEYRKTYWHTCSHILAQAVKRLYPEVKLAIGPSIDEGFYYDMDSPFPFTPEILEQI 68

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M++I        +  L  E+A +  E K E +KVE++  +P   +++ Y+QGE+ DL
Sbjct: 69  EAEMRKICKEKLKLERFELPREEAIKFMEEKGEPFKVELINDLPEDAHISFYKQGEFTDL 128

Query: 183 CRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           C GPH+ STG+VK    KL     AYWRGDSNR  L RIYG A+  ++EL  YL  +EE+
Sbjct: 129 CAGPHLDSTGRVKGNAIKLTACNAAYWRGDSNRETLQRIYGIAFPKKEELDAYLQRIEEA 188

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           +KRDHRKL +E+ LF + ++G G  F+   G  +  TLI Y R+   K  Y EI+TP +L
Sbjct: 189 KKRDHRKLGKELGLFTLMDEGPGFPFFLPNGMVLRNTLIDYWRQIHKKYGYVEISTPMML 248

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ LW++SGHWD Y+ NM+       T+ D   FA+KPMNCPG + V+     SYR+LP+
Sbjct: 249 NRQLWERSGHWDHYKNNMYT------TVIDGEDFAIKPMNCPGGMLVYKTEPHSYRDLPL 302

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+ E G V+R+E SG+LHGL RVR FTQDDAHVF T+EQM +   +   L   +Y  FG 
Sbjct: 303 RVGELGLVHRHELSGALHGLFRVRCFTQDDAHVFMTREQMKDVIQETVRLFDEVYSTFGL 362

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
              + +LST PE  +G+   W+  ++I+K  +  +           +  G+GAFYGPK +
Sbjct: 363 NYTI-ELSTMPEDHIGTVEEWERNQDILKNAITDMGK------EFVINEGDGAFYGPKLD 415

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           + L D++GR WQCGTIQ+D  LP RF   Y  +  EK  PVMIHR V GSIERFIG++ E
Sbjct: 416 FHLADSLGRTWQCGTIQLDSQLPERFELEYTGADGEKHRPVMIHRVVLGSIERFIGVITE 475

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +F G  P WLSP+Q  +  IT    +YA E+  LL+     +E D RNE I  KIRE  +
Sbjct: 476 HFAGAFPAWLSPVQVSILPITDRTAQYADEVKALLEKAGFRVEVDHRNEKIGKKIREAQL 535

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KK+P +++ GDKEA   ++ +R         +SL + I IL +E
Sbjct: 536 KKVPYMLVLGDKEAEGATVAVRNRAGGDQGAMSLDEFINILREE 579


>gi|300214322|gb|ADJ78738.1| Threonyl-tRNA synthetase (Threonine--tRNA ligase) (ThrRS)
           [Lactobacillus salivarius CECT 5713]
          Length = 649

 Score =  594 bits (1530), Expect = e-167,   Method: Composition-based stats.
 Identities = 233/655 (35%), Positives = 375/655 (57%), Gaps = 25/655 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M S IK+TFPD S+K F    T +++A+SIS SLAKKAVA  ++G   DL+ P+  +GSI
Sbjct: 1   MSS-IKITFPDNSVKEFDASVTTAEIAKSISISLAKKAVAGKVDGNFVDLNQPLKEDGSI 59

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDE 118
           EIIT +    L V+  + A ++A A+  ++P ++  +G + E GFY+D D  E   +  +
Sbjct: 60  EIITKDSNDGLVVLWRTAAQVLANALHELYPNMKFGLGDVTEHGFYFDTDNSEGQVAETD 119

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN--VTLYRQ 176
             +I +KM EII  + P  +   S E+A  L     + Y+ E++  +  K N  V  Y+Q
Sbjct: 120 FEKISQKMSEIIKANLPIERVEFSEEEALNLV--SGDEYQEELVRDVANKNNGRVVAYKQ 177

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           G++ D+  G  + STG+VK F KL+ VAGAYW+G S+ PML RIYGTA+  Q++L   L 
Sbjct: 178 GDFIDITDGVVLSSTGEVKIF-KLLSVAGAYWKGASSNPMLQRIYGTAFYKQKDLDAELQ 236

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEI 294
             +E+ +RDHR +  E+DLF +      G+ +W   G  I + +  Y+  +++   ++ +
Sbjct: 237 RQKEARERDHRVIGNELDLFFVDPKVGAGLPYWMPNGATIRRVIERYIIDKEVAWGFQHV 296

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
            TP + + +L++QSGHWD YR +MF          D     L+PMNCP H+ V+NH  +S
Sbjct: 297 YTPVLANLNLYKQSGHWDHYREDMFPPMDMG----DGEMLELRPMNCPSHIQVYNHHKRS 352

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YRELP+R+AE G ++R E SG+L GL RVR  T +D H F   + + +E   +  L+  +
Sbjct: 353 YRELPLRIAELGMMHRYEKSGALTGLSRVREMTLNDGHDFIEPDHIEDEIKTLIKLMTEV 412

Query: 415 YKDFGFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
           Y DF       +LS R  K        D +W+ +++ +K  +D +       +      G
Sbjct: 413 YNDFDITDYRFRLSYRDPKNTEKYFDDDEMWEKSQSKLKAAMDDMG------LEYFEAEG 466

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           E AFYGPK +   K A+G +    TIQ+DF LP RF+  Y+ +  E+  PVM+HR +  +
Sbjct: 467 EAAFYGPKIDVQTKTALGGEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMVHRGIVST 526

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNE 589
           +ERF   + E +KG  P WL+P Q  +  + +   ++Y  ++++ L++H + +  D RNE
Sbjct: 527 MERFTAYLTEMYKGAFPTWLAPHQVDIIPVKNDLHMDYVNDLSSKLRAHGIRVTVDDRNE 586

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            + YKIR+  + KIP  ++ GD+E S  ++ +R++G   T  ++  +   +L ++
Sbjct: 587 KMGYKIRQAQVNKIPYTLVIGDEEVSNGTVTVRKYGEEKTNTMTKDEFKNLLFED 641


>gi|188588550|ref|YP_001919768.1| threonyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43]
 gi|238689641|sp|B2UYW3|SYT_CLOBA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|188498831|gb|ACD51967.1| threonyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43]
          Length = 643

 Score =  594 bits (1530), Expect = e-167,   Method: Composition-based stats.
 Identities = 240/649 (36%), Positives = 365/649 (56%), Gaps = 20/649 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEII 62
            IK++  DGS+K F    +  ++A+SIS  LA+ A    +NGKVCDL + + E  S+ I 
Sbjct: 1   MIKVSLKDGSVKEFEAGLSVYEIAKSISEGLARNACCGVVNGKVCDLRNKINEDVSLSIC 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +       +RHS +H++A AV+ ++P+ ++AIGP I  GFYYDFDK+  FS+ +L ++
Sbjct: 61  TFDSQEGKDAVRHSISHVLAYAVKRLFPQTKLAIGPSIATGFYYDFDKDVAFSAQDLEKL 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M++II  +    K  L  ++A EL +   E YKVE++  +   E ++ Y+ GE+ DL
Sbjct: 121 EAEMKKIIKENPSIEKFELPRDEALELMK--DEPYKVELINDLGEDEIISFYKIGEFTDL 178

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPHV S   +K   KL + AGAYW+GD    ML+RIYGTA+  + EL +YL  +EE++
Sbjct: 179 CAGPHVMSLKPIK-ALKLTRSAGAYWKGDEKNKMLTRIYGTAFLKKSELDEYLEAIEEAK 237

Query: 243 KRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVL 300
           KRDH KL RE+ LF   E+   G+     KG KI QTL  ++   + +  Y    TP + 
Sbjct: 238 KRDHNKLGRELKLFTTDENVGQGLPLLMPKGAKIVQTLQRWVEDEEERRGYVLTKTPLMA 297

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
              L++ SGHWD Y+  MF +    D  KD   FAL+PM CP    ++N    SYR+LP+
Sbjct: 298 KSDLYKISGHWDHYKDGMFVL---GDEEKDEEVFALRPMTCPFQYTIYNAEQHSYRDLPI 354

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R  E  +++RNE SG +HGL+RVR FT  D H+  T EQ+  E   +  LI  + K  G 
Sbjct: 355 RYGETSTLFRNESSGEMHGLIRVRQFTLADGHLIVTPEQLEEEFKGVLELIQYLMKTLGI 414

Query: 421 EKIMVKL-----STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           ++ +            EK +     W+  ++ M+ +LD +K      IN      E AFY
Sbjct: 415 DEDISYRFSKWDPNNTEKYINDPEAWNKTQDTMRTILDHLK------INYVEADDEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +   ++  G++    T+Q+DF L  RF+  Y++ + EK  P +IHR+  G  ER +
Sbjct: 469 GPKLDLQCRNVHGKEDTLFTVQIDFALAERFDMSYIDKNGEKKRPYIIHRSSIGCYERTL 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE + G  P WLSP+Q  V  I+    +YA+ +   L++  + IE D+R E I YKI
Sbjct: 529 AMLIEKYAGAFPTWLSPVQVKVLPISDKYNDYAESVVKSLRNKGVRIEADYRAEKIGYKI 588

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           RE  +++ P I++ G+KEA+   + +R   +     + L      L  E
Sbjct: 589 REARLERTPYILVVGEKEAANNEVSVRSRKNDDEGAIKLDAFTERLLNE 637


>gi|56789234|gb|AAH88355.1| TARS protein [Homo sapiens]
          Length = 682

 Score =  594 bits (1530), Expect = e-167,   Method: Composition-based stats.
 Identities = 236/617 (38%), Positives = 346/617 (56%), Gaps = 23/617 (3%)

Query: 2   PSDIKLTFPDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
              IK+T PDG   +      T   +A  IS+ LA   V   +N  V DL  P+  + ++
Sbjct: 80  SKPIKVTLPDGKQVDAESWKTTPYQIACGISQGLADNTVIAKVNNVVWDLDRPLEEDCTL 139

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQP-FSSDE 118
           E++  ED  + AV  HS AHIM EA++ ++    +  GP IE+GFYYD   E+   SS++
Sbjct: 140 ELLKFEDEEAQAVYWHSSAHIMGEAMERVYGGC-LCYGPPIENGFYYDMYLEEGGVSSND 198

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
            + +E   ++II     F +  +  E    +F+     +K  IL         T+YR G 
Sbjct: 199 FSSLEALCKKIIKEKQAFERLEVKKETLLAMFKY--NKFKCRILNEKVNTPTTTVYRCGP 256

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLCRGPHVR TG++K   K+ K +  YW G ++   L RIYG ++   + L ++  F 
Sbjct: 257 LIDLCRGPHVRHTGKIK-ALKIHKNSSTYWEGKADMETLQRIYGISFPDPKMLKEWEKFQ 315

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
           EE++ RDHRK+ R+ +L+   E   G  F+  KG  I+  LI ++R + +   ++E+ TP
Sbjct: 316 EEAKNRDHRKIGRDQELYFFHELSPGSCFFLPKGAYIYNALIEFIRSEYRKRGFQEVVTP 375

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  LW  SGHW  Y  NMF+ +       +   FALKPMNCPGH  +F+H  +S+RE
Sbjct: 376 NIFNSRLWMTSGHWQHYSENMFSFEV------EKELFALKPMNCPGHCLMFDHRPRSWRE 429

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+RLA+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E     + + ++Y  
Sbjct: 430 LPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSV 489

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF   +  LSTRPEK +G   +WD AE  ++  L+      +      +  G+GAFYGP
Sbjct: 490 FGFSFKLN-LSTRPEKFLGDIEVWDQAEKQLENSLNEFGEKWE------LNSGDGAFYGP 542

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIG 536
           K +  +KDAIGR  QC TIQ+DF LP RFN  YV+    +K  PV++HRA+ GS+ER I 
Sbjct: 543 KIDIQIKDAIGRYHQCATIQLDFQLPIRFNLTYVSHDGDDKKRPVIVHRAILGSVERMIA 602

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKI 595
           I+ EN+ G  P WLSP Q +V  +  +  EYAQ++           + D     T+N KI
Sbjct: 603 ILTENYGGKWPFWLSPRQVMVVPVGPTCDEYAQKVRQQFHDAKFMADIDLDPGCTLNKKI 662

Query: 596 REHSIKKIPIIIICGDK 612
           R   + +   I++ G+K
Sbjct: 663 RNAQLAQYNFILVVGEK 679


>gi|300120854|emb|CBK21096.2| unnamed protein product [Blastocystis hominis]
          Length = 767

 Score =  593 bits (1529), Expect = e-167,   Method: Composition-based stats.
 Identities = 240/671 (35%), Positives = 356/671 (53%), Gaps = 46/671 (6%)

Query: 4   DIKLTFPDGSIKNF-PVHATGSDVAESISRSLAKKAVAVAI------------------- 43
           DI +T PDG++K       T   +AE IS+ LA+  V+  +                   
Sbjct: 106 DITITLPDGAVKTGKSWETTPLMIAEGISKGLAQHVVSARVLYEDASICSSCVNTEEPEE 165

Query: 44  -------NGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVA 95
                   G++ DL+ P+     + ++  ED    A   HS AHI+ EA+++++  V + 
Sbjct: 166 RESCDEEEGELWDLTRPLEGNCKLWLLKFEDKGGKATFWHSSAHILGEAMENLY-GVDLC 224

Query: 96  IGPIIEDGFYYD-FDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
           IGP + DGFYYD +  +   S  E   IE +   II     F +  L+  +A ELF+   
Sbjct: 225 IGPALTDGFYYDAYFGKMTVSEAECKDIEAEANRIIKEKQRFDRCELTKAQALELFK--H 282

Query: 155 EAYKVEIL-ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSN 213
             +K  I+   +P     T+YR G   DLC GPH+ ST  VK F  ++K +  YW GD+ 
Sbjct: 283 NPFKTSIIRSKVPDGATTTVYRCGSLIDLCMGPHLPSTALVKGF-AVVKNSACYWLGDAE 341

Query: 214 RPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGW 273
              L R+YG ++   +EL ++  F EE++K DHR+L  + DLF   E   G  F+  KG 
Sbjct: 342 NDTLQRVYGISFPDAKELKEWKKFQEEAKKNDHRRLGEQQDLFFFHELSPGSCFFLPKGA 401

Query: 274 KIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
            I+  LI ++R +  +  Y E+ +P V +  LW  SGH   YR +MF   C      D  
Sbjct: 402 YIYNKLIEFIRHEYHERGYTEVVSPNVYNLELWNISGHASHYRDSMFLFNC------DDT 455

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
            + LKPMNCPGH  +F H + SYRELP+R A+FG ++RNE SG+L+GL RVR F QDDAH
Sbjct: 456 EYGLKPMNCPGHCLMFKHAMHSYRELPIRFADFGVLHRNELSGALNGLTRVRRFQQDDAH 515

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
           +FC  +Q+  E   + + +  +Y  FG    + +LSTRP+K +G  ALW  AE  +   L
Sbjct: 516 IFCRPDQIKQEVSGVLDFMRHVYGIFGMSFNL-ELSTRPKKAMGDLALWQQAEASLTESL 574

Query: 453 DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
           +          N  V  G+GAFYGPK +  + DA+ R  Q  TIQ+DF LP RF   Y  
Sbjct: 575 NEFIGEG----NWKVNPGDGAFYGPKIDIKVMDALHRVHQTATIQLDFQLPIRFELEYKK 630

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIA 572
           +      PVM+HRA+ GS+ER   I++E+FKG  P WLSP QAIV  + ++ +EYAQ++ 
Sbjct: 631 ADGSMERPVMVHRAILGSVERSFAILLEHFKGKWPFWLSPRQAIVIPVNATCMEYAQKVR 690

Query: 573 NLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
             L  ++   E D    T+N  +RE  + +   I++ G+KEA   ++ IR   +      
Sbjct: 691 QRLWDNYFQAEVDDTGRTLNKMVREAQLAQFNYILVVGNKEAETDTVTIRSRSNEIIGTK 750

Query: 633 SLLDAIPILTK 643
           ++ + I +  +
Sbjct: 751 TVDECIAMFKE 761


>gi|164657235|ref|XP_001729744.1| hypothetical protein MGL_3288 [Malassezia globosa CBS 7966]
 gi|159103637|gb|EDP42530.1| hypothetical protein MGL_3288 [Malassezia globosa CBS 7966]
          Length = 635

 Score =  593 bits (1528), Expect = e-167,   Method: Composition-based stats.
 Identities = 236/639 (36%), Positives = 361/639 (56%), Gaps = 35/639 (5%)

Query: 24  SDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMA 82
            D+A++IS+SL+++ V   +NG + DL  P+  + ++E++  E P    V  HS AH++ 
Sbjct: 1   MDIAKAISKSLSERVVISKVNGILWDLERPLEGDATLELLDFEHPEGKRVFWHSSAHVLG 60

Query: 83  EAVQSIWPEVQVAIGPIIEDGFYYDF----DKEQPFSSDELAQIEKKMQEIIARDSPFLK 138
           EA +  +    + IGP  ++GFYY+       ++P  S++   +EK +   +    PF +
Sbjct: 61  EAAERHY-GCHLCIGPPTDEGFYYEMGMGDSGDRPVKSEDFEPLEKLIGMAVKDKQPFER 119

Query: 139 QYLSHEKARELFESKKEAYKVEILES-IPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
             L+ E+  E+F+     YKV I+ S IP   + T+YR G   DLC GPH+  TG++K  
Sbjct: 120 AVLTKEQLLEMFKY--NKYKVHIINSKIPDGTSTTVYRCGPMIDLCVGPHIPHTGRIK-A 176

Query: 198 FKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFH 257
             ++K + +Y+ GD     L R+YG ++  ++++T+Y +FL E+ KRDHR++ RE +LF 
Sbjct: 177 MTVLKNSASYFLGDQKNDSLQRLYGISFPDKKQMTEYKHFLAEAAKRDHRRIGREQELFM 236

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRA 316
             +   G  FW   G +I+ TL  +++ + +   ++E+ +P + +  LW+ SGHW +Y+ 
Sbjct: 237 FHDLSPGSCFWLPHGARIYNTLQDFIKSEYRKRGFDEVISPNMYNSKLWETSGHWANYKD 296

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
           +MF +        D  TFALKPMNCPGH  +F    +SY+ELP+R A+FG ++RNE SG+
Sbjct: 297 DMFVLSV------DKETFALKPMNCPGHCLMFASRDRSYKELPLRFADFGVIHRNEASGA 350

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
           L GL RVR F QDDAH+FC   Q+ +E +   + + ++Y  FGF    ++LSTRPEK +G
Sbjct: 351 LSGLTRVRRFVQDDAHIFCRASQIEDEMINCFDFLQTVYGHFGF-SFKMELSTRPEKHLG 409

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
               WD AE  +   LD             +  G+GAFYGPK +  + DA+ R+ QC TI
Sbjct: 410 DVETWDAAEKRLASALDRFVPGR-----WELNPGDGAFYGPKIDITISDAMRREHQCATI 464

Query: 497 QVDFNLPSRFNAFYVN------SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL 550
           Q+DF LP RFN  Y        +      PVMIHRAV GS+ERFI I+IENF G  P WL
Sbjct: 465 QLDFQLPQRFNLEYKTPQGGAEADKHTERPVMIHRAVVGSLERFIAILIENFAGKWPFWL 524

Query: 551 SPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           SP Q +V  +T S  EYA+E+  LL       + D  + T+N KIR   + +   + + G
Sbjct: 525 SPRQVLVVPVTQSVYEYAEEVRALLWDRGFFADADLSDNTLNKKIRNGELAQYNFVFVVG 584

Query: 611 DKEASERSIGIRRFGS------TTTQKVSLLDAIPILTK 643
            +E   RS+ +R   +        T  + L D +  L K
Sbjct: 585 HEEKETRSVNVRNRDNDPKVMKGKTDTIKLDDILAKLQK 623


>gi|309364909|emb|CAP23504.2| CBR-TARS-1 protein [Caenorhabditis briggsae AF16]
          Length = 729

 Score =  593 bits (1528), Expect = e-167,   Method: Composition-based stats.
 Identities = 220/647 (34%), Positives = 354/647 (54%), Gaps = 21/647 (3%)

Query: 2   PSDIKLTFPDGSIKNF-PVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
              I++T PDG +        T  ++AE IS+ LA+ AV   +NG V DL  P     ++
Sbjct: 83  SEPIEITLPDGKVHEGKSWRTTPFEIAERISKGLAEAAVISKVNGVVWDLDRPFEGNATL 142

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDE 118
           E++  ED  +  V  HS AH++ EA++  +    +  GP I++GFYYD + + +    ++
Sbjct: 143 ELLKFEDDEAKQVFWHSSAHVLGEAMER-YCGGHLCYGPPIQEGFYYDMWHENRTICPED 201

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
             +I++ ++  +     F +  ++ E   E+F+     +KV I++        T+YR G 
Sbjct: 202 FPKIDQIVKAAVKDKQKFERLEMTKEDLLEMFKY--NEFKVRIIKEKINTPKTTVYRCGP 259

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLCRGPHVR TG+VK    + K + +YW G ++   L R+YG ++   ++L ++    
Sbjct: 260 LIDLCRGPHVRHTGKVK-AMAITKNSSSYWEGKADAESLQRLYGISFPDSKQLKEWQKLQ 318

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRKL +E DLF   +   G  FW+ KG  I+  L+ ++R++ +   + E+ TP
Sbjct: 319 EEAAKRDHRKLGKEQDLFFFHQLSPGSAFWYPKGAHIYNKLVDFIRKQYRRRGFTEVITP 378

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + ++ LW+ SGHW  Y  +MF ++       +   F LKPMNCPGH  +F H   +Y E
Sbjct: 379 NMYNKKLWETSGHWQHYSEDMFKIEV------EKEEFGLKPMNCPGHCLMFGHMPHTYNE 432

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP R A+FG ++RNE SG+L GL RVR F QDDAH+FC ++Q+  E  +  + +   Y+ 
Sbjct: 433 LPFRFADFGVLHRNEMSGALTGLTRVRRFQQDDAHIFCRQDQISEEIKQCLDFLEYAYEK 492

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
                  + LSTRPE  +G    WD AE  +   L+             +  G+GAFYGP
Sbjct: 493 VFGFTFKLNLSTRPEGFLGKIETWDQAEADLTEALNATGRKW------ALNPGDGAFYGP 546

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  ++DA+ R++QC TIQ+DF LP++F+  Y +   EK  PVMIHRAV GS+ER   I
Sbjct: 547 KIDITIQDALKRNFQCATIQLDFQLPNQFDLSYFDEKGEKQRPVMIHRAVLGSVERMTAI 606

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FRNETINYKIR 596
           + E++ G  P WLSP Q  + T+  S  +YA+++   +      +E D F  +T+N ++R
Sbjct: 607 LTESYGGKWPFWLSPRQCKIITVHESVRDYAKDVKKQIFDAGFEVEYDEFCGDTMNKQVR 666

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              + +   I++ G KE    ++ +R   +    +V +   +    +
Sbjct: 667 NSQLAQFNFILVLGAKEKENGTVNVRTRDNAVRGEVPIEKLLSKFRR 713


>gi|82523876|emb|CAI78599.1| threonyl-tRNA synthetase [uncultured delta proteobacterium]
          Length = 631

 Score =  593 bits (1528), Expect = e-167,   Method: Composition-based stats.
 Identities = 275/645 (42%), Positives = 399/645 (61%), Gaps = 23/645 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEII 62
            IK+   DGS            V        + K V    N    DL+  + E G I  I
Sbjct: 3   QIKIKLHDGSEIIVQKGCRIDSVLND-----SNKFVVAKYNDNFVDLTSLITEPGYILGI 57

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
            P       ++RHS +HIMA+AV  ++P +++AIGP IE+GFYYDF++ + F+ D+L  I
Sbjct: 58  LPNSEEGKGILRHSASHIMAQAVMELFPGIKIAIGPAIENGFYYDFERAESFTPDDLEHI 117

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M EII +  P +++ +S E+A E F+   E YKVE+LE I A  NV++Y+QG++ DL
Sbjct: 118 EKRMHEIIKKSVPIVREDISKEQAIEYFKQHGEIYKVELLEDI-ADNNVSIYKQGDFVDL 176

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+  TG++K F KL+ +AGAYWRG+    ML RIYGTA+ T +EL ++L  LEE +
Sbjct: 177 CRGPHLIHTGKLKAF-KLLSIAGAYWRGNEKNKMLQRIYGTAFPTSKELKEHLNHLEEVK 235

Query: 243 KRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQVL 300
           KRDHRKL +E+DLF ++E+   G+I WH KG      L  + ++  +K  Y+++  PQ+L
Sbjct: 236 KRDHRKLGKELDLFSLSEEVGAGMILWHPKGAMFRYLLEDFEIKEHLKRGYQKVIGPQLL 295

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
              LW++SGH+D YR NM+  +       D +++ +KPMNC  H+ ++   + SYR+LP+
Sbjct: 296 RSELWKKSGHFDHYRENMYFSEI------DNQSYGIKPMNCLAHMLIYKSHIHSYRDLPI 349

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R  E G+V+R+E SG LHGL+RVR FTQDDAH+ CT EQ+ NE   I + I  +   FGF
Sbjct: 350 RYFELGTVHRHEKSGVLHGLLRVREFTQDDAHILCTPEQLDNEIKSILDFIKYVMGIFGF 409

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           +   V++STRPE  +GSD  W+ A N +K  L+             +  G+GAFYGPK +
Sbjct: 410 KYE-VEISTRPEHSIGSDEDWERATNALKSALEESGTG------YDLNEGDGAFYGPKID 462

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           + LKDA+ R WQC TIQ DF LP RF   YV     K  PVM+HR + G+IERF+GI+IE
Sbjct: 463 FKLKDALDRKWQCATIQCDFTLPERFELSYVGQDGVKYRPVMLHRVILGAIERFVGILIE 522

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           ++ G  P+WLSP+QA++ T+T    EYAQ +   L    + +E D RNE +  K+RE  +
Sbjct: 523 HYAGAFPVWLSPVQAVILTVTDRVDEYAQNLYQELIDADIRVEMDIRNEKLGLKVREAQL 582

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           +KIP ++I GDKE SE+ + +R        ++++ D I ++ K+ 
Sbjct: 583 QKIPYMLIIGDKEVSEKRVTLRCRDDKKQSELNIEDFIGLVKKDC 627


>gi|328464763|gb|EGF36081.1| threonyl-tRNA synthetase [Lactobacillus helveticus MTCC 5463]
          Length = 644

 Score =  592 bits (1527), Expect = e-167,   Method: Composition-based stats.
 Identities = 228/644 (35%), Positives = 359/644 (55%), Gaps = 22/644 (3%)

Query: 6   KLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITP 64
            +T PDGS K+F    T +D+A++I+ SL K AVA  +NG++  L   +  +  + IIT 
Sbjct: 4   SITLPDGSKKDFEESLTIADLAQNIATSLGKAAVAGKVNGELKPLDYKLDSDSEVAIITN 63

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           +D   L V+R + A +     +  +PE+++      EDGFY D DK+      EL ++EK
Sbjct: 64  KDEEGLDVLRATAAFVFEAVAKCEYPELRLGEHVADEDGFYVDTDKDDQIKVGELPKLEK 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
            MQ++I          ++  +  +L++   + +K E+L  +   + V  Y+ G++ D C 
Sbjct: 124 AMQKVIKNGEKIEHVQIAKSELEDLYK--NDKFKSELLAKV-EGDTVDAYKLGDFVDFCF 180

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
              + +TG++K+F KL+ VAGAYW G S+ PML RI+GTA+  + +L   L   +E ++R
Sbjct: 181 DALLPNTGKIKQF-KLLSVAGAYWLGKSSNPMLQRIFGTAFFKEADLRADLKRRQEIKER 239

Query: 245 DHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQ 302
           DHR + R++DLF +      G+ +W  KG  I + +  Y+  R++ D Y+ + TP +++ 
Sbjct: 240 DHRTIGRDLDLFFVDPKVGAGLPYWMPKGATIRRVVERYIIDREVADGYQHVYTPVLMNL 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             ++ SGHW  YR +MF          D     L+PMNCP H+ +F H ++SYR+LP+R+
Sbjct: 300 DAYKTSGHWAHYRDDMFPPMDMG----DGEMLELRPMNCPSHIQIFKHHIRSYRDLPLRV 355

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AE G ++R E SG+L GL RVR  T +D H F   +Q+  E  KI  LI+ +YKDF    
Sbjct: 356 AELGMMHRYEKSGALSGLQRVREMTLNDGHTFVVLDQVQTEFAKILKLIMEVYKDFDITD 415

Query: 423 IMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
              +LS R  K       +D +W+ ++ ++KG +D +       ++     GE AFYGPK
Sbjct: 416 YYFRLSYRDPKNTDKYFANDEMWEKSQKMLKGAMDDLG------LDYVEAEGEAAFYGPK 469

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +   K A+G D    TIQ+DF LP RF   YV    E+  PVMIHR + G++ERFI  +
Sbjct: 470 LDIQTKTALGNDETMSTIQLDFMLPDRFGLTYVGKDGEEHRPVMIHRGIVGTMERFIAYL 529

Query: 539 IENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
            E +KG  P WL+P+QA +  + +    EYA+++   L      +E D RNE + YKIRE
Sbjct: 530 TEIYKGAFPTWLAPVQAEIIPVNNEAHGEYAEKVRAELAKRGFRVEVDDRNEKMGYKIRE 589

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
              +K+P  ++ GD+E     + +RR+G+      SL D I  +
Sbjct: 590 SQTQKVPYTLVLGDEEMKSGKVNLRRYGTDEEISKSLDDFINEI 633


>gi|331090802|ref|ZP_08339649.1| threonyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_46FAA]
 gi|330399910|gb|EGG79569.1| threonyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_46FAA]
          Length = 653

 Score =  592 bits (1527), Expect = e-167,   Method: Composition-based stats.
 Identities = 240/656 (36%), Positives = 361/656 (55%), Gaps = 18/656 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           +K+T  DGS+K +    +  ++A  IS  LA+ A A  ING+V DL   V  + S+ I+T
Sbjct: 1   MKITLKDGSVKEYAESKSVYEIALDISEGLARAACAGEINGEVVDLRTMVEEDCSLNILT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
             D   LA +RH+ +H++AEAV+ ++PE ++AIGP I+ G+YYDF+   PFS+++LA IE
Sbjct: 61  ANDKEGLAALRHTASHVLAEAVKRLYPEAKLAIGPSIDTGYYYDFEH-APFSNEDLATIE 119

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M++II   +   +  L   +A    E K E YKVE++  +P    ++ Y+QGE+ DLC
Sbjct: 120 KEMKKIIKEGAKIERFELPRAEAIAYMEEKGEPYKVELINDLPEDAVISFYKQGEFVDLC 179

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+ ST  VK F KL+  +GAYWRGD    ML+R+YGTA+  + EL  ++  LEE +K
Sbjct: 180 AGPHLMSTKGVKAF-KLISSSGAYWRGDEKNKMLTRVYGTAYAKKDELKAHMEHLEEIKK 238

Query: 244 RDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLD 301
           RDH KL REM LF      G G+     KG  I QT+  ++   + K  Y    TP +  
Sbjct: 239 RDHNKLGREMGLFTTVDVIGQGLPLLMPKGAAIIQTMQRWVEDEEEKRGYVRTKTPLMAK 298

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + L+  S HW  Y+  MF +   D+  +    FAL+PM CP    V+    KSYR+LP R
Sbjct: 299 KDLYVISDHWGHYKEGMFVL--GDEDKEGEEVFALRPMTCPFQYYVYKQSQKSYRDLPCR 356

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
             E  +++RNE SG +HGL RVR FT  + H+  T EQ+ +E     +L        G E
Sbjct: 357 YGETSTLFRNEDSGEMHGLTRVRQFTISEGHLVITPEQVEDEFRGCVDLAKYCLTTLGVE 416

Query: 422 KIMVKL-----STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           + +            +K +G+  +WD+ E+IM+ +L+ ++      I+     GE AFYG
Sbjct: 417 EDVTYRLSLADPDNMDKYLGTREMWDEVEDIMRKMLNHLE------IDYTEETGEAAFYG 470

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK +   K+  G++    TIQ+D  L  RF+  +V+   EK  P +IHR   G  ER + 
Sbjct: 471 PKLDIQAKNVYGKEDTMITIQLDMFLAERFDMSFVDKDGEKKRPYIIHRTAMGCYERTLA 530

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
            +IE + G  P WL P Q  V  I+    +YA ++   L+++ +    D R E I YKIR
Sbjct: 531 WLIEKYAGLFPTWLCPEQVRVLPISEKYHDYAHQVLGELRANGIKCTVDDRAEKIGYKIR 590

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           E  + K+P +++ G KE  E+ + +R        + SL   I  + KE    + +K
Sbjct: 591 ETRLDKVPYMLVVGAKEEEEKVVSVRSRFLGDEGQKSLDTFIADICKEIRTKEIRK 646


>gi|156042356|ref|XP_001587735.1| hypothetical protein SS1G_10975 [Sclerotinia sclerotiorum 1980]
 gi|154695362|gb|EDN95100.1| hypothetical protein SS1G_10975 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 791

 Score =  592 bits (1526), Expect = e-167,   Method: Composition-based stats.
 Identities = 247/690 (35%), Positives = 366/690 (53%), Gaps = 63/690 (9%)

Query: 4   DIKLTFPDGSIKN-FPVHATGSDVAESISRSLAKKAVAVAING---KVCDLSDPVR-EGS 58
            I +T  DGSIK       T + +AE IS+SL K+ V   +NG   ++ DL  P+  +  
Sbjct: 82  PITITLADGSIKEGIAWETTPAQIAEGISKSLLKRTVVAKLNGDSEQLWDLERPLENDCK 141

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ--PFSS 116
           +E++  E+     V  HS AHI+ EA +  +    + IGP I++GFYY+         + 
Sbjct: 142 LELLPFENDEGRRVFWHSSAHILGEASERRF-GCSLCIGPPIDNGFYYEMGLPNQGTVTD 200

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES-IPAKENVTLYR 175
            +   +EK + +I+     F +  LS +   E+F+     YK  I++  I    N T+YR
Sbjct: 201 ADWQPLEKLVGQIVKEKQKFERLVLSKDDLLEMFK--DNKYKQHIIKDKIADGTNTTVYR 258

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
            G   DLCRGPHV +TG+++ F  +MK + +Y+ G+ +   L RIYG ++  ++++ ++ 
Sbjct: 259 NGPLIDLCRGPHVPNTGRIETF-AIMKNSASYFLGNKDNDSLQRIYGVSFPDKKQMAEHK 317

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEI 294
            FLEE+ KRDHRKL ++ +LF   E   G   W   G +I+ T+ S++R +     Y E+
Sbjct: 318 KFLEEAAKRDHRKLGKDQELFFFHELSPGSAMWLPHGARIYNTIQSFLREEYWKRGYNEV 377

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
            TP + +  LW+ SGHW  Y+ +MF      D       FALKPMNCPGH  +F H  +S
Sbjct: 378 ITPNMYNSELWKTSGHWAYYKDDMFTFPVEKD------VFALKPMNCPGHCLMFGHRERS 431

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           +RELP R+A+FG ++RNE SG+L GL RVR F QDDAH+FC ++Q+ +E   + + + +I
Sbjct: 432 HRELPWRVADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCREDQIKDEITGLFDFLRAI 491

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           Y   GF   + KLSTRPEK +G    WD AE+ ++  LD    SS   +   +  G+GAF
Sbjct: 492 YGLLGFTFKL-KLSTRPEKFLGKIETWDMAEDKLRSALDEF-ASSDGGVPWELNEGDGAF 549

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC---------------- 518
           YGPK +  + D + R+WQC TIQ+DF LP  F   Y                        
Sbjct: 550 YGPKIDITICDCLKREWQCATIQLDFQLPQNFGLEYNTGDVPTKKEEAAVKEPVVKPKKD 609

Query: 519 ----------------------HPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI 556
                                  PVMIHRA+ GSIERF  I+IE+F G  P WLSP Q +
Sbjct: 610 TEPEDPNVPKERVYKPLTPGCARPVMIHRAMAGSIERFTAILIEHFAGKWPFWLSPRQIL 669

Query: 557 VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASE 616
           V  +     EYA+E+ ++     + I+ D    T+  KIR   + +   I + GD E + 
Sbjct: 670 VIPVGVGYFEYAKEVQSIFHKQQMFIDVDLSGNTLQKKIRTGQLAQYNFIFVVGDTEMNG 729

Query: 617 RSIGIRRFGSTTTQK----VSLLDAIPILT 642
           R + +R    T++Q     VSL +AI  LT
Sbjct: 730 REVNVRNRDDTSSQDRGKPVSLQEAIEKLT 759


>gi|160936998|ref|ZP_02084362.1| hypothetical protein CLOBOL_01887 [Clostridium bolteae ATCC
           BAA-613]
 gi|158440188|gb|EDP17935.1| hypothetical protein CLOBOL_01887 [Clostridium bolteae ATCC
           BAA-613]
          Length = 636

 Score =  592 bits (1525), Expect = e-167,   Method: Composition-based stats.
 Identities = 254/591 (42%), Positives = 378/591 (63%), Gaps = 19/591 (3%)

Query: 54  VREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQP 113
           + +GS++    E    L  IRH+ +H++A+AV+ ++P+ ++AIGP I+DGFYYDFD+E  
Sbjct: 57  LPDGSVQ----EAEDELRAIRHTASHVLAQAVKRLYPDAKLAIGPAIDDGFYYDFDREGG 112

Query: 114 FSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTL 173
           F+ ++L ++E +M +I+  + P     L   +A    E K E YKVE++E +P +E ++ 
Sbjct: 113 FTPEDLEKLEAEMAKIVKENLPVKPFVLPRAEAVRFMEEKGEPYKVELIEDLPEEETISF 172

Query: 174 YRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQ 233
           Y+QGE+ DLC GPH+  T  VK F KL  +AGAYWRG     ML+RIYGTA+  + +L  
Sbjct: 173 YQQGEFVDLCAGPHIMYTKGVKAF-KLTSIAGAYWRGSEKNKMLTRIYGTAFANKTDLES 231

Query: 234 YLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYE 292
           YL  +EE++KRDHRKL +E+ LF  AE+G G  F+  KG  +  TLI Y R    +D Y+
Sbjct: 232 YLTMMEEAKKRDHRKLGKELGLFMFAEEGPGFPFFLPKGMTLKNTLIDYWREIHYRDGYQ 291

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E++TP +L + LW+ SGHWD Y+ NM+       T+ D   +A+KPMNCPG + V+ +  
Sbjct: 292 EVSTPIILSRKLWENSGHWDHYKDNMYT------TVIDEEDYAVKPMNCPGGMLVYKNQP 345

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
            SYR+LP+++ E G V+R+E SG LHGLMRVR FTQDDAH+F   +Q+ ++   +  LI 
Sbjct: 346 HSYRDLPLKVGELGLVHRHEKSGQLHGLMRVRCFTQDDAHIFMRDDQIEDQIKGVTKLIN 405

Query: 413 SIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
            +Y  FGFE   V+LSTRPE  +GSD  W+ A N ++  L+ +       ++  V  G+G
Sbjct: 406 EVYTQFGFEYF-VELSTRPEDSMGSDEDWEMATNGLRKALEDMG------LDYIVNEGDG 458

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           AFYGPK ++ L+D++GR WQCGTIQ+DF +P RF+  Y      K  P+MIHR  FGSIE
Sbjct: 459 AFYGPKIDFHLRDSLGRTWQCGTIQLDFQMPQRFDLEYTAEDGSKKRPIMIHRVCFGSIE 518

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
           RFIGI+IE+F G  P+WL+P+Q  V  ++  +++YA  +   LK+  +  E D ++E + 
Sbjct: 519 RFIGILIEHFAGKFPVWLAPVQVKVIPVSEKSMDYATGVYEKLKAAGIRTELDHKDEKVG 578

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           YKIR+  ++K+P +++ G+KEA+E +I +R           L   I  + K
Sbjct: 579 YKIRQAQLEKVPYMLVLGEKEAAEGAITVRSRDKGDLGAAGLDAFIEDIKK 629


>gi|326431769|gb|EGD77339.1| threonyl-tRNA synthetase isoform 2 [Salpingoeca sp. ATCC 50818]
          Length = 766

 Score =  592 bits (1525), Expect = e-167,   Method: Composition-based stats.
 Identities = 230/645 (35%), Positives = 365/645 (56%), Gaps = 25/645 (3%)

Query: 2   PSDIKLTFPDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
              IK+T PDG + +      T  DVA+SIS  +A  AV   +N  + D++  +  + +I
Sbjct: 83  SKPIKITLPDGKVVDGESWRTTPYDVAKSISEGMANSAVVAKVNDTLFDMTRELEEDCTI 142

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDE 118
           + +  ED     V  HS AHI+ EA++  +    +  GP I +GF+YD D  E+  +  +
Sbjct: 143 KFLFFEDEDGKEVFWHSSAHILGEAMEMYFGGH-LCYGPPIANGFFYDMDMGERTVNDAD 201

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L  +EK + + + +  PF +  ++ E    +FE     +K  I++    +   T+YR G 
Sbjct: 202 LKAVEKVVNKAVKQKQPFQRLVMTKEDLLRMFE--HNPFKQRIIKEKVTEPKTTVYRCGP 259

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLCRGPH+R TGQVK F  + K + +YW GD+    L R+Y  ++  + +L ++   +
Sbjct: 260 LIDLCRGPHIRHTGQVKAF-AVTKSSSSYWEGDAGAECLQRVYAISFPKKDQLKEWKKLM 318

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
           EE+ KRDHRK+ RE  LF   +   G  F+  +G +I++TL+ +MR +     +EE+ TP
Sbjct: 319 EEAAKRDHRKIGREQQLFFFDDLSPGSCFFEPRGARIYRTLMEFMREQYITRGFEEVVTP 378

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + ++ LW+ SGHW  Y  N+F+ +  ++T      FA+KPMNCP H  +F+H  +SY+E
Sbjct: 379 NIFNKRLWETSGHWQHYAENIFSFEVENET------FAMKPMNCPSHCVMFSHRNRSYKE 432

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+A+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E       + ++Y  
Sbjct: 433 LPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCRPEQIEDEIKGCLAFLNAVYGT 492

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF   +  LSTRPEK +G   +W+ AE  +   LD   +  +      +  G+GAFYGP
Sbjct: 493 FGFTYELN-LSTRPEKFLGDVEVWERAEASLAKALDEFGHEWK------LNPGDGAFYGP 545

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV---NSHSEKCHPVMIHRAVFGSIERF 534
           K +  + DA+ R +QC TIQ+DF LP RFN  YV           PV+IHRA+ GS+ER 
Sbjct: 546 KIDITVHDALKRSFQCATIQLDFQLPIRFNLEYVPARKEEGVVYRPVIIHRAILGSVERM 605

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FRNETINY 593
             I+ E++ G  P WLSP QA V  I     +YA+E+     +H  +++ D   + T+  
Sbjct: 606 FAILCEHYAGKWPFWLSPRQAQVVPIHPEFNKYAEEVRMFFHTHGFAVDVDADDSLTLQK 665

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           K+R   +++   I++ G+ E  +R++ +R    +   ++SL + +
Sbjct: 666 KVRRACVEQYNFILVVGEAECKKRTVNVRTRDGSRIGELSLDELL 710


>gi|268532388|ref|XP_002631322.1| C. briggsae CBR-TRS-1 protein [Caenorhabditis briggsae]
          Length = 704

 Score =  591 bits (1524), Expect = e-166,   Method: Composition-based stats.
 Identities = 220/647 (34%), Positives = 354/647 (54%), Gaps = 21/647 (3%)

Query: 2   PSDIKLTFPDGSIKNF-PVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
              I++T PDG +        T  ++AE IS+ LA+ AV   +NG V DL  P     ++
Sbjct: 59  SEPIEITLPDGKVHEGKSWRTTPFEIAERISKGLAEAAVISKVNGVVWDLDRPFEGNATL 118

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDE 118
           E++  ED  +  V  HS AH++ EA++  +    +  GP I++GFYYD + + +    ++
Sbjct: 119 ELLKFEDDEAKQVFWHSSAHVLGEAMER-YCGGHLCYGPPIQEGFYYDMWHENRTICPED 177

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
             +I++ ++  +     F +  ++ E   E+F+     +KV I++        T+YR G 
Sbjct: 178 FPKIDQIVKAAVKDKQKFERLEMTKEDLLEMFKY--NEFKVRIIKEKINTPKTTVYRCGP 235

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLCRGPHVR TG+VK    + K + +YW G ++   L R+YG ++   ++L ++    
Sbjct: 236 LIDLCRGPHVRHTGKVK-AMAITKNSSSYWEGKADAESLQRLYGISFPDSKQLKEWQKLQ 294

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRKL +E DLF   +   G  FW+ KG  I+  L+ ++R++ +   + E+ TP
Sbjct: 295 EEAAKRDHRKLGKEQDLFFFHQLSPGSAFWYPKGAHIYNKLVDFIRKQYRRRGFTEVITP 354

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + ++ LW+ SGHW  Y  +MF ++       +   F LKPMNCPGH  +F H   +Y E
Sbjct: 355 NMYNKKLWETSGHWQHYSEDMFKIEV------EKEEFGLKPMNCPGHCLMFGHMPHTYNE 408

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP R A+FG ++RNE SG+L GL RVR F QDDAH+FC ++Q+  E  +  + +   Y+ 
Sbjct: 409 LPFRFADFGVLHRNEMSGALTGLTRVRRFQQDDAHIFCRQDQISEEIKQCLDFLEYAYEK 468

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
                  + LSTRPE  +G    WD AE  +   L+             +  G+GAFYGP
Sbjct: 469 VFGFTFKLNLSTRPEGFLGKIETWDQAEADLTEALNATGRKW------ALNPGDGAFYGP 522

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  ++DA+ R++QC TIQ+DF LP++F+  Y +   EK  PVMIHRAV GS+ER   I
Sbjct: 523 KIDITIQDALKRNFQCATIQLDFQLPNQFDLSYFDEKGEKQRPVMIHRAVLGSVERMTAI 582

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FRNETINYKIR 596
           + E++ G  P WLSP Q  + T+  S  +YA+++   +      +E D F  +T+N ++R
Sbjct: 583 LTESYGGKWPFWLSPRQCKIITVHESVRDYAKDVKKQIFDAGFEVEYDEFCGDTMNKQVR 642

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              + +   I++ G KE    ++ +R   +    +V +   +    +
Sbjct: 643 NSQLAQFNFILVLGAKEKENGTVNVRTRDNAVRGEVPIEKLLSKFRR 689


>gi|327398462|ref|YP_004339331.1| threonyl-tRNA synthetase [Hippea maritima DSM 10411]
 gi|327181091|gb|AEA33272.1| threonyl-tRNA synthetase [Hippea maritima DSM 10411]
          Length = 620

 Score =  591 bits (1524), Expect = e-166,   Method: Composition-based stats.
 Identities = 269/625 (43%), Positives = 397/625 (63%), Gaps = 18/625 (2%)

Query: 23  GSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIRHSCAHIM 81
           G+++ E + ++  K  +A  I GKV DL   +  + +IE IT      L ++RHS AHIM
Sbjct: 6   GTNLLEYVKKNKLKDIIAAKIEGKVVDLDTTLDSDKNIEFITINSKEGLEILRHSAAHIM 65

Query: 82  AEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYL 141
           A+AVQ ++ E + AIGP IE+GFYYD D  +  + D+L +IEK+M++I+  +  F ++ L
Sbjct: 66  AQAVQHVFGEAKFAIGPAIENGFYYDMDVGRTITDDDLKKIEKEMKKIVGANYKFSRKEL 125

Query: 142 SHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLM 201
             E+A ++F+ K + YKVEIL+ +     V+LY QG++ DLCRGPH+ STG +K F KL+
Sbjct: 126 PKEEAVKIFQDKGDEYKVEILKDLDED-VVSLYTQGDFTDLCRGPHIPSTGYLKHF-KLL 183

Query: 202 KVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED 261
            VAGAY++GD  RPML RIYG A+ T++EL +YL FLEE +KRDHRKL +++DLF I ++
Sbjct: 184 NVAGAYFKGDEARPMLQRIYGAAFATKEELDRYLKFLEEVKKRDHRKLGKQLDLFSINDE 243

Query: 262 -GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMF 319
            G G+I WH KG  +   +  + R   +K  YE +  P++L   LW++SGH+D YR NM+
Sbjct: 244 VGPGLIIWHPKGAMLRYLIEEFERKEHLKRGYEFVKGPEILRTQLWKRSGHFDHYRENMY 303

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHG 379
                  T  D ++F +KPMNC GH+ V+    +SYRELP R  E G V+R+E SG LHG
Sbjct: 304 F------TEIDDQSFGIKPMNCLGHIQVYKSKKRSYRELPKRYFELGVVHRHEKSGVLHG 357

Query: 380 LMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDA 439
           L+RVR FTQDDAH+FC  +Q+ +E + + N +  +   FGFE  + ++STRPE  +G+D 
Sbjct: 358 LLRVREFTQDDAHIFCRPDQLNDEIIGVLNFVQDVMDIFGFEYEL-EISTRPENSIGTDQ 416

Query: 440 LWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVD 499
            W+ A N +   L              +  G+GAFYGPK +  LKDA+GR WQC TIQ D
Sbjct: 417 QWELATNALINALKNTGR------EYDINEGDGAFYGPKIDVKLKDALGRKWQCATIQCD 470

Query: 500 FNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTT 559
           F LP RF+  YV+   ++  PVM+HR + GSIERFI I+IEN++G+ P+W++P+Q  V  
Sbjct: 471 FTLPERFDLTYVDEDGKEKQPVMVHRVILGSIERFIAILIENYEGDFPVWIAPVQVRVLP 530

Query: 560 ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSI 619
           ++     YA+++   LK   + +E + RNET+  KIR     K+P +++ GDKE  +++I
Sbjct: 531 VSEKHEAYAKDVYQTLKDRGIRVEIEERNETLGKKIRFAETDKVPYVVVVGDKEIEDKTI 590

Query: 620 GIRRFGSTTTQKVSLLDAIPILTKE 644
            +R+        +++   I  L KE
Sbjct: 591 SVRKRKEGDLGCMNIDGFIERLQKE 615


>gi|119631208|gb|EAX10803.1| threonyl-tRNA synthetase, isoform CRA_a [Homo sapiens]
          Length = 619

 Score =  591 bits (1523), Expect = e-166,   Method: Composition-based stats.
 Identities = 232/620 (37%), Positives = 348/620 (56%), Gaps = 22/620 (3%)

Query: 29  SISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQS 87
            +S+ LA   V   +N  V DL  P+  + ++E++  ED  + AV  HS AHIM EA++ 
Sbjct: 4   ELSQGLADNTVIAKVNNVVWDLDRPLEEDCTLELLKFEDEEAQAVYWHSSAHIMGEAMER 63

Query: 88  IWPEVQVAIGPIIEDGFYYDFDKEQP-FSSDELAQIEKKMQEIIARDSPFLKQYLSHEKA 146
           ++    +  GP IE+GFYYD   E+   SS++ + +E   ++II     F +  +  E  
Sbjct: 64  VYGGC-LCYGPPIENGFYYDMYLEEGGVSSNDFSSLEALCKKIIKEKQAFERLEVKKETL 122

Query: 147 RELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGA 206
             +F+     +K  IL         T+YR G   DLCRGPHVR TG++K   K+ K +  
Sbjct: 123 LAMFKY--NKFKCRILNEKVNTPTTTVYRCGPLIDLCRGPHVRHTGKIK-ALKIHKNSST 179

Query: 207 YWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVI 266
           YW G ++   L RIYG ++   + L ++  F EE++ RDHRK+ R+ +L+   E   G  
Sbjct: 180 YWEGKADMETLQRIYGISFPDPKMLKEWEKFQEEAKNRDHRKIGRDQELYFFHELSPGSC 239

Query: 267 FWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD 325
           F+  KG  I+  LI ++R + +   ++E+ TP + +  LW  SGHW  Y  NMF+ +   
Sbjct: 240 FFLPKGAYIYNALIEFIRSEYRKRGFQEVVTPNIFNSRLWMTSGHWQHYSENMFSFEV-- 297

Query: 326 DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRG 385
               +   FALKPMNCPGH  +F+H  +S+RELP+RLA+FG ++RNE SG+L GL RVR 
Sbjct: 298 ----EKELFALKPMNCPGHCLMFDHRPRSWRELPLRLADFGVLHRNELSGALTGLTRVRR 353

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
           F QDDAH+FC  EQ+ +E     + + ++Y  FGF   +  LSTRPEK +G   +WD AE
Sbjct: 354 FQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSVFGFSFKLN-LSTRPEKFLGDIEVWDQAE 412

Query: 446 NIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSR 505
             ++  L+      +      +  G+GAFYGPK +  +KDAIGR  QC TIQ+DF LP R
Sbjct: 413 KQLENSLNEFGEKWE------LNSGDGAFYGPKIDIQIKDAIGRYHQCATIQLDFQLPIR 466

Query: 506 FNAFYVNSHS-EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA 564
           FN  YV+    +K  PV++HRA+ GS+ER I I+ EN+ G  P WLSP Q +V  +  + 
Sbjct: 467 FNLTYVSHDGDDKKRPVIVHRAILGSVERMIAILTENYGGKWPFWLSPRQVMVVPVGPTC 526

Query: 565 VEYAQEIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRR 623
            EYAQ++           + D     T+N KIR   + +   I++ G+KE    ++ IR 
Sbjct: 527 DEYAQKVRQQFHDAKFMADIDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKISGTVNIRT 586

Query: 624 FGSTTTQKVSLLDAIPILTK 643
             +    + ++ + I  L +
Sbjct: 587 RDNKVHGERTISETIERLQQ 606


>gi|206889512|ref|YP_002249047.1| threonyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM
           11347]
 gi|206741450|gb|ACI20507.1| threonyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM
           11347]
          Length = 617

 Score =  591 bits (1523), Expect = e-166,   Method: Composition-based stats.
 Identities = 271/613 (44%), Positives = 390/613 (63%), Gaps = 18/613 (2%)

Query: 37  KAVAVAINGKVCDLSDP---VREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQ 93
           +A+A+ IN ++ DLS       +  IEIITP+    L ++RHS AHIMA AV+ ++P+V+
Sbjct: 13  QAIALKINREIKDLSFISSLNEDEEIEIITPQSKEGLEILRHSVAHIMAHAVKDLFPDVK 72

Query: 94  VAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESK 153
           V IGP IEDGFYYDFD++ PF+ ++L +IEK+M EII    PF+++ +S ++A +LFES 
Sbjct: 73  VTIGPAIEDGFYYDFDRDTPFTEEDLQKIEKRMHEIIKSRQPFIRKEISKDEAIKLFESL 132

Query: 154 KEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSN 213
            E+YK+EI  +    E V++Y +G + DLCRGPH+  TG VK F KL+ VAGAYWRGD  
Sbjct: 133 GESYKIEI-INEIEDEKVSIYEEGGFIDLCRGPHIPHTGIVKAF-KLLSVAGAYWRGDER 190

Query: 214 RPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKG 272
             ML RIYGTA+ T++EL  YL FLEE +KRDHR+L +++ LF I+E+ G G+I W   G
Sbjct: 191 NKMLQRIYGTAFPTKEELQDYLNFLEEVKKRDHRRLGKQLRLFEISEEVGPGLIIWLPNG 250

Query: 273 WKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
             + + +  + +   +K  Y+ + TP +    LW++SGH D YR NM++    D+     
Sbjct: 251 AIVRKIIEDFWKDEHLKAGYQLLYTPHIARLDLWRKSGHLDFYRENMYSPMEIDEIA--- 307

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
             + LKPMNCP H+ V+   L+SYRELP+R AE G+VYR E SG LHGL+RVRGFTQDDA
Sbjct: 308 --YQLKPMNCPFHIQVYKSELRSYRELPLRFAELGTVYRYERSGVLHGLLRVRGFTQDDA 365

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
           H+FCT+EQ+  E  K+ +  + I   FGF    + +STRPEK VGS   W+ A   ++  
Sbjct: 366 HIFCTEEQLEEEIQKVLDFTVFILSTFGFTAYDIYISTRPEKYVGSIENWEKATFALEEA 425

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
           L T        +   +  GEG FYGPK +  +KD + R WQC TIQVDFN+P RF+  Y 
Sbjct: 426 LKT------RNLPYQIDPGEGVFYGPKIDIKIKDVLNRSWQCSTIQVDFNIPERFDITYR 479

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
               ++  P+MIHRA+ GS+ERF+G++IE++ G  PLWL+P+Q  V +I+    +YA  +
Sbjct: 480 GKDGKEHRPIMIHRALMGSLERFMGVLIEHYAGAFPLWLAPVQIEVMSISEKHADYAARV 539

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
              L ++   ++ +  NE I YKIR  ++ K+P ++I GDKE    +I +R+      + 
Sbjct: 540 YRQLINNDFRVKLNIDNEKIGYKIRNATLNKVPYMVIIGDKEIENNAITVRKRDGENFEL 599

Query: 632 VSLLDAIPILTKE 644
           +     I  L  +
Sbjct: 600 IKFEKFIEFLVND 612


>gi|217967413|ref|YP_002352919.1| threonyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
 gi|217336512|gb|ACK42305.1| threonyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
          Length = 638

 Score =  591 bits (1523), Expect = e-166,   Method: Composition-based stats.
 Identities = 263/617 (42%), Positives = 388/617 (62%), Gaps = 17/617 (2%)

Query: 31  SRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSCAHIMAEAVQSIW 89
              L  +     ING   DL+    +GS +E++  E+     + RH+ AHI+A AV+ ++
Sbjct: 24  KEGLEGRVFGAKINGVFSDLNVYPPDGSLVELLDWENEEGRNIYRHTSAHILAHAVKELF 83

Query: 90  PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKAREL 149
           PEV++ IGP IEDGFYYDF +++PFS ++L +IE KM+EII R+ P  +  ++ E+A ++
Sbjct: 84  PEVKLGIGPAIEDGFYYDFYRKEPFSQEDLEKIENKMKEIINRNLPIERIEVTREEAIKI 143

Query: 150 FESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWR 209
               KE +K+E+LE IP  E ++ Y+QG + DLCRGPH+ ST  VK F KL+ V+GAYWR
Sbjct: 144 LRDLKEDFKLELLEEIPEGEKISFYKQGSFMDLCRGPHLPSTSWVKAF-KLLSVSGAYWR 202

Query: 210 GDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFH-IAEDGSGVIFW 268
           GD   PM  RIYGT++ +++EL +YL   EE+++RDHRKL RE+++F+   E G G+IF+
Sbjct: 203 GDEKNPMFQRIYGTSFPSEEELKKYLEEREEAQRRDHRKLGRELEIFNTFEEAGPGLIFY 262

Query: 269 HRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
             KG  +   +  + R   +K  Y  + TP ++   LW++SGHWD+YR NMF ++  D  
Sbjct: 263 PPKGAMLRLIIEEFERKEHLKRGYFPVITPHLMQAELWKRSGHWDNYRENMFFLQVED-- 320

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
               + +A+KPMNCPGH+ ++N  ++SYR+LP+R  E G+VYR E SG L+GL R RGFT
Sbjct: 321 ----KDYAVKPMNCPGHILIYNSKVRSYRDLPLRFFEMGTVYRYERSGVLYGLERARGFT 376

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENI 447
           QDDAH+FCT+EQ+ +E   + + +  +   FG ++ +V LST+PEK +GSD +W+ A   
Sbjct: 377 QDDAHIFCTQEQLEDEIKGVLDFVFYMLDSFGLKEYVVTLSTKPEKYIGSDEIWEKATQA 436

Query: 448 MKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFN 507
           +K  L++        I   +  GEGAFYGPK +  LK  +G+ WQ  TIQVDFNLP RF+
Sbjct: 437 LKNALESTG------IEYRIAEGEGAFYGPKIDVGLKGLLGKMWQGPTIQVDFNLPERFD 490

Query: 508 AFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEY 567
             Y      K  PVMIHRA+ GS ERFIGI++E++ G  PLWL+P Q  +  I+    EY
Sbjct: 491 LTYDAPDGTKRRPVMIHRAILGSYERFIGILVEHYGGRFPLWLAPEQVRILPISERHNEY 550

Query: 568 AQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGST 627
           A+ +   L+++ +  E D     +NYK+R+   +K+P I I GDKE  E  + +R   + 
Sbjct: 551 AEYVLRNLRNNDIRAEIDKDQAKLNYKLRKAIAEKVPYIFIVGDKEKEENKVSVRVH-NK 609

Query: 628 TTQKVSLLDAIPILTKE 644
                 L   +  L +E
Sbjct: 610 DLGMFDLAYVVTKLLEE 626


>gi|310796349|gb|EFQ31810.1| threonyl-tRNA synthetase [Glomerella graminicola M1.001]
          Length = 791

 Score =  591 bits (1523), Expect = e-166,   Method: Composition-based stats.
 Identities = 235/701 (33%), Positives = 366/701 (52%), Gaps = 72/701 (10%)

Query: 3   SDIKLTFPDGSIKNFPV-HATGSDVAESISRSLAKKAVAVAIN---GKVCDLSDPVRE-G 57
             I +T PDGS++       T  ++A+SIS SL K+ V   ++    ++ DL  P+ +  
Sbjct: 79  EPITITMPDGSVRQGTSYETTPGEIAKSISNSLYKRTVVARLDSDENQLWDLDRPLEKSC 138

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD--KEQPFS 115
            +E++  +D +   V  HS AHI+ EA +  +    + IGP +++GFYY+          
Sbjct: 139 KLELLNFDDEQGKQVFWHSSAHILGEACERRF-GCSLCIGPPVDNGFYYEMALPGGAAVQ 197

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES-IPAKENVTLY 174
           + +   +E  +  I+     F +  L+ E+  E+       YK  I+   IP     T+Y
Sbjct: 198 ASDWKPLESIVGSIVKEKQKFERLELTKEQLLEM--FSYNKYKQHIINDKIPDGTKTTVY 255

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
           R G   DLCRGPHV ST +++ F  +MK + +Y+ G      L R+YG ++ +++EL  +
Sbjct: 256 RNGPLIDLCRGPHVPSTDRIEAFS-IMKNSASYFLGSQENDSLQRVYGVSFPSKKELAAH 314

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEE 293
             +LEE+  RDHRKL ++  LF   E   G   W   G +I+ TL++Y++ +  K DY E
Sbjct: 315 KKWLEEAAARDHRKLGQDQQLFFFHELSPGSAMWLPHGARIYNTLLAYIKEQYFKRDYHE 374

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           + +P + +  LW+ SGHWD Y+ +MF +        D   F LKPMNCPGH  +F H  K
Sbjct: 375 VISPNMYNAELWKISGHWDHYKDDMFVIDV------DKEKFGLKPMNCPGHCLMFAHTPK 428

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           +Y +LP R+A+FG ++RNE SG+L GL RVR F QDDAH+FC ++Q+ +E   + + +  
Sbjct: 429 AYHQLPWRVADFGVLHRNEASGALSGLTRVRRFQQDDAHIFCREDQIKSEISNLFDFLRE 488

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           +Y   GF   + +LSTRPEK +G    W+ AE+++K  LD     ++  +   +  G+GA
Sbjct: 489 MYGLLGFTFKL-RLSTRPEKYLGELETWNRAEDMLKQALDEF-ALTEAGVPWTLNEGDGA 546

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH------------------- 514
           FYGPK +  + D + R+WQC TIQ+DF LP  F   YV++                    
Sbjct: 547 FYGPKIDIKIMDVLNREWQCATIQLDFQLPQNFGLEYVSADAPAKSKEEAPAAPKAPEVK 606

Query: 515 ----------------------------SEKCHPVMIHRAVFGSIERFIGIMIENFKGNL 546
                                       +    PV+IHRA+ GSIERF GI+IE+F G  
Sbjct: 607 VKDPQAIIDSAAGVGEEKEKKRTIKPLTNGCQRPVIIHRAMAGSIERFTGILIEHFAGKW 666

Query: 547 PLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPII 606
           P WLSP Q +V  +    VEYA+E+    K   + ++ D    T+  KIR   + +   I
Sbjct: 667 PFWLSPRQIMVIPVGKGFVEYAEEVQATFKKQGMWVDVDLSGNTLPKKIRSAQLSQYNFI 726

Query: 607 IICGDKEASERSIGIRRFGSTTTQK----VSLLDAIPILTK 643
            + GD+E   + + IR    T++Q     V +++A+  L K
Sbjct: 727 FVVGDEEMKHKQVNIRYRDDTSSQDRGKPVDVIEAVERLKK 767


>gi|332251678|ref|XP_003274973.1| PREDICTED: threonyl-tRNA synthetase, cytoplasmic isoform 3
           [Nomascus leucogenys]
          Length = 619

 Score =  590 bits (1522), Expect = e-166,   Method: Composition-based stats.
 Identities = 233/620 (37%), Positives = 347/620 (55%), Gaps = 22/620 (3%)

Query: 29  SISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSCAHIMAEAVQS 87
            +S+ LA   V   +N  V DL  P+ E S +E++  ED  + AV  HS AHIM EA++ 
Sbjct: 4   ELSQGLADNTVIAKVNNVVWDLDRPLEEDSTLELLKFEDEEAQAVYWHSSAHIMGEAMER 63

Query: 88  IWPEVQVAIGPIIEDGFYYDFDKEQP-FSSDELAQIEKKMQEIIARDSPFLKQYLSHEKA 146
           ++    +  GP IE+GFYYD   E+   SS++ + +E   ++II     F +  +  E  
Sbjct: 64  VYGGC-LCYGPPIENGFYYDMYLEEGGVSSNDFSSLEALCKKIIKEKQAFERLEVKKETL 122

Query: 147 RELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGA 206
             +F+     +K  IL         T+YR G   DLCRGPHVR TG++K   K+ K +  
Sbjct: 123 LAMFKY--NKFKCRILNEKVNTPTTTVYRCGPLIDLCRGPHVRHTGKIK-ALKIHKNSST 179

Query: 207 YWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVI 266
           YW G ++   L RIYG ++   + L ++    EE++ RDHRK+ R+ +L+   E   G  
Sbjct: 180 YWEGKADMETLQRIYGISFPDPKMLKEWEKLQEEAKNRDHRKIGRDQELYFFHELSPGSC 239

Query: 267 FWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD 325
           F+  KG  I+  LI ++R + +   ++E+ TP + +  LW  SGHW  Y  NMF+ +   
Sbjct: 240 FFLPKGAYIYNALIEFIRSEYRKRGFQEVVTPNIFNSRLWMTSGHWQHYSDNMFSFEV-- 297

Query: 326 DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRG 385
               +   FALKPMNCPGH  +F+H  +S+RELP+RLA+FG ++RNE SG+L GL RVR 
Sbjct: 298 ----EKELFALKPMNCPGHCLMFDHRPRSWRELPLRLADFGVLHRNELSGALTGLTRVRR 353

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
           F QDDAH+FC  EQ+ +E     + + ++Y  FGF   +  LSTRPEK +G   +WD AE
Sbjct: 354 FQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSIFGFSFKLN-LSTRPEKFLGDIEVWDQAE 412

Query: 446 NIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSR 505
             ++  L+      +      +  G+GAFYGPK +  +KDAIGR  QC TIQ+DF LP R
Sbjct: 413 KQLENSLNEFGEKWE------LNSGDGAFYGPKIDIQIKDAIGRYHQCATIQLDFQLPIR 466

Query: 506 FNAFYVNSHS-EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA 564
           FN  YV+    +K  PV++HRA+ GS+ER I I+ EN+ G  P WLSP Q +V  +  + 
Sbjct: 467 FNLTYVSHDGDDKKRPVIVHRAILGSVERMIAILTENYGGKWPFWLSPRQVMVVPVGPTC 526

Query: 565 VEYAQEIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRR 623
            EYAQ++           + D     T+N KIR   + +   I++ G+KE    ++ IR 
Sbjct: 527 DEYAQKVRQQFHDAKFMADIDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKISGTVNIRT 586

Query: 624 FGSTTTQKVSLLDAIPILTK 643
             +    + ++ + I  L +
Sbjct: 587 RDNKVHGERTISETIERLQQ 606


>gi|312143811|ref|YP_003995257.1| threonyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
 gi|311904462|gb|ADQ14903.1| threonyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
          Length = 652

 Score =  590 bits (1522), Expect = e-166,   Method: Composition-based stats.
 Identities = 247/650 (38%), Positives = 377/650 (58%), Gaps = 19/650 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           S++K+T PDGS K +    T  ++A SI   L + A+A  ++G+  D    + +   + I
Sbjct: 2   SEVKITLPDGSQKEYDAGVTVEEIAYSIGSGLGRDAIAGVVDGRKVDAYYEITDDVELSI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           IT +    L VIRH+ +H+MA+AV+ ++  VQVAIGP IEDGFYYDFD E+ F+ + L +
Sbjct: 62  ITIDSEEGLEVIRHTASHVMAQAVKRLYDNVQVAIGPDIEDGFYYDFDLEESFNQESLEE 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE +MQ+II  D    ++ L  E+A  L E + E YK+E++  +   E ++LY QG++ D
Sbjct: 122 IEAEMQKIIDEDIEVRRKELPREEAIALMEERNEDYKIELINGL-DDEMISLYFQGDFVD 180

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ STG VK F KL+  AGAYWRGD N  ML RIYGTA+ +Q+EL +YL   EE+
Sbjct: 181 LCRGPHLPSTGYVKAF-KLLNTAGAYWRGDENNAMLQRIYGTAFASQKELEKYLERREEA 239

Query: 242 EKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQV 299
           +KRDH KL RE+DLF    E G G+     KG K+ Q L  ++   + K  Y+   TP +
Sbjct: 240 KKRDHNKLGRELDLFMTVDEIGQGLPLLKPKGAKVVQILQRFVEDEEEKRGYQITKTPFM 299

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHW+ Y+  MF +    D  KD    AL+PM CP    ++N  L+SYR+LP
Sbjct: 300 AKSDLYEISGHWEHYKDGMFIL---GDEEKDDNLMALRPMTCPFQFQIYNSKLRSYRDLP 356

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R +E  S++RNE SG +HGL+R+R FT  + H+  T EQ+  E   + +LI  + +  G
Sbjct: 357 IRYSETSSLFRNEASGEMHGLIRLRQFTISEGHLIVTPEQLEEEFRGVIDLINYMMESIG 416

Query: 420 FEKIMVKL-----STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            E  +            +K + +   W D++  MK +LD +       +      GE AF
Sbjct: 417 IEDDIWYRFSKWDPENKDKYIDNPEAWKDSQAKMKTILDNL------DMEYEEADGEAAF 470

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +   K+  G++    T+Q+DF LP RF+  Y++ ++EK HP++IHR   G  ER 
Sbjct: 471 YGPKLDIQFKNVHGKEDTIITVQIDFALPERFDMTYIDENNEKQHPIVIHRTSIGCYERT 530

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
           + ++IE + G  P WL+P+QA +  ++   ++YA +I   L++  + +E D R E + YK
Sbjct: 531 LAMLIEKYAGAFPTWLAPVQAKIIPVSDDQLDYAYQIKKELEADDIRVEVDARTEKVGYK 590

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IRE  ++++P ++I G +E    S+ +R           L +    +  E
Sbjct: 591 IREAQVEQVPYMLIVGSREEENGSVSVRERREGDLGTSPLAEFKERILAE 640


>gi|162447220|ref|YP_001620352.1| threonyl-tRNA synthetase [Acholeplasma laidlawii PG-8A]
 gi|189083597|sp|A9NF46|SYT_ACHLI RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|161985327|gb|ABX80976.1| threonyl-tRNA synthetase [Acholeplasma laidlawii PG-8A]
          Length = 642

 Score =  590 bits (1522), Expect = e-166,   Method: Composition-based stats.
 Identities = 248/656 (37%), Positives = 394/656 (60%), Gaps = 24/656 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            IK+TFPDG+IK++    T  +VAE IS SLAKK VA   N  + ++S  +  +G ++++
Sbjct: 1   MIKVTFPDGNIKSYKKGITVLEVAEDISISLAKKIVAAKFNEDLVEISRKLEHDGKLQLL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
           TP++  S  V+ HS AH+MA+A++ ++P+    +GP IE+G+YYD D K+  F+  +L +
Sbjct: 61  TPKEELSFHVLNHSAAHLMAQAIRKLYPDALFGVGPAIEEGYYYDVDFKDSVFTDADLEE 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +EK M+++   +    +  +S+++AR++F+   + YK+E++E +   + +++YRQGE+ D
Sbjct: 121 VEKMMKKLSEENHLIERIEVSYDEARDIFK--NDPYKLELIE-VYKDDQLSVYRQGEFID 177

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG HV ST  +K F KL+ +AGAYWRGD+    L R+YG A+  + EL ++L  LEE 
Sbjct: 178 LCRGGHVPSTKYIKHF-KLLSIAGAYWRGDAKNRQLVRVYGIAYFEKAELDKHLVMLEER 236

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           + RDHRK+ +++D+F  +++ GSG+ FW  KG  I + +  Y+  ++++  Y  + TP +
Sbjct: 237 KLRDHRKIGKDLDIFMTSQEVGSGLPFWLPKGATIRRIIERYITDKELELGYLHVYTPIM 296

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +   ++QSGHWD Y  NM+          D     L+PMNCP H+ ++   + SYRELP
Sbjct: 297 ANVEFYKQSGHWDHYHENMYPPMDLG----DGEMLVLRPMNCPHHMMIYKKDIHSYRELP 352

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R AE G ++R E SG+L GL RVR  T +DAH+F   +Q+  E +++ +LII +YKDF 
Sbjct: 353 IRFAELGMMHRYEKSGALSGLQRVREMTLNDAHIFVRPDQIKEEFMRVVHLIIEVYKDFK 412

Query: 420 FEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R      K    D +W  AE+ +K V+D +K   ++ I      GE AFY
Sbjct: 413 ITDYSFRLSYRDPENKEKYFDDDQMWQRAESELKNVMDEMKLPYKEAI------GEAAFY 466

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE-KCHPVMIHRAVFGSIERF 534
           GPK +  ++ A+G +    T+Q+DF LP RF+  YV    +    PV+IHR V  ++ERF
Sbjct: 467 GPKLDIQVRTAMGMEETLSTVQLDFLLPERFDLTYVGEDGKNNHRPVVIHRGVVSTMERF 526

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           +  +IE +KG+ PLWL+P+Q  +  +      +Y   +   LK     +E+DFRNE + Y
Sbjct: 527 VAYLIEEYKGSFPLWLAPVQLKLIPVNLDLHKDYVMNLHEQLKKLGFRVESDFRNEKLGY 586

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPD 649
           KIRE    KIP  ++ GD E +  SI  R +GS     +S+   I +L +  +  D
Sbjct: 587 KIREAQTLKIPYQLVVGDNEMNTHSITYRPYGSEKQINISIDGFIKLLNERMINKD 642


>gi|328773873|gb|EGF83910.1| hypothetical protein BATDEDRAFT_18299 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 706

 Score =  590 bits (1522), Expect = e-166,   Method: Composition-based stats.
 Identities = 237/651 (36%), Positives = 362/651 (55%), Gaps = 27/651 (4%)

Query: 3   SDIKLTFPDGSIK-NFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIE 60
           + I++T PDG I        T  ++A+++S+SLA + V   ++G + DL  P+ +  S+E
Sbjct: 62  TPIEVTLPDGRIMPGVAWETTPFEIAKTLSKSLADRVVIAKVDGVLFDLVRPMEQSCSLE 121

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           ++  +      V  HS AH++ EA +  +    + IGP IE+GFYY+   E+  +  +  
Sbjct: 122 LLDFDHEEGKKVFWHSSAHVLGEACELHY-GCHLCIGPPIEEGFYYEMSMERSVTLADYE 180

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES-IPAKENVTLYRQGEW 179
            ++   +  ++   PF +  +S E   E+   +   YKV I++  IP   + T+YR G  
Sbjct: 181 SLQTLAKRAVSEKQPFERLVVSKENLLEM--FQDNKYKVHIIKDKIPDNTSTTVYRCGPL 238

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLC GPH+ +T ++K   K+ K + +Y+ G++    L R+YG ++   + + +Y  F+E
Sbjct: 239 IDLCYGPHIPNTNRIK-ALKVTKNSSSYFLGNAQNDSLQRVYGVSFPDTKLMKEYEKFVE 297

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+EKRDHRK+  E +LF   +   G  F+   G +I+ TLI   R + +   + E+ TP 
Sbjct: 298 EAEKRDHRKIGTEQELFFFNDFSPGSAFFLPHGTRIYNTLIDLQRSEYRKRGFHEVVTPN 357

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           + +  LW++SGHW +Y  +MFA+        +   FALKPMNCPGH  +F +  +SYREL
Sbjct: 358 MYNTKLWERSGHWANYHEDMFALDV------EKEKFALKPMNCPGHCLIFKNRDRSYREL 411

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLA+FG ++RNE SG+L GL RVR F QDDAH+FC  +Q+  E     + +  IY  F
Sbjct: 412 PLRLADFGVLHRNEASGALSGLTRVRRFQQDDAHIFCRLDQIGTEMEGCLDFLKHIYSIF 471

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF   + KLSTRPE  +G  A WD AE +++  L+   ++        +  G+GAFYGPK
Sbjct: 472 GFTFEL-KLSTRPENFLGEIATWDQAEKLLEEALNKFGSTW------SLNEGDGAFYGPK 524

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH--SEKCHPVMIHRAVFGSIERFIG 536
            + ++ DA+ R  QC TIQ+DF LP RF   Y      ++   PVMIHRA+ GS+ER I 
Sbjct: 525 IDIVISDALRRRHQCATIQLDFQLPDRFELEYRTDDPANQFSRPVMIHRAILGSVERMIA 584

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           I+ ENF G  P WLSP Q IV  I     EYA ++AN L +  L  E D  + T+  KIR
Sbjct: 585 ILTENFAGKWPFWLSPRQVIVVPIAVPFNEYATKVANQLYAAGLYAEADVSDLTLKKKIR 644

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK----VSLLDAIPILTK 643
              I +   I + G++E    S+  R      ++     VS+ +    L K
Sbjct: 645 NAEIAQWNFIFVVGEEEEKSDSVNCRNRDDPLSKNKGVCVSVQEIQGKLIK 695


>gi|46447649|ref|YP_009014.1| threonyl-tRNA synthetase [Candidatus Protochlamydia amoebophila
           UWE25]
 gi|73919812|sp|Q6M9L0|SYT_PARUW RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|46401290|emb|CAF24739.1| probable threonine-tRNA ligase [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 650

 Score =  590 bits (1522), Expect = e-166,   Method: Composition-based stats.
 Identities = 253/641 (39%), Positives = 375/641 (58%), Gaps = 17/641 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIEIIT-PE 65
           +   D S    P  +T  D+A+ ++     +A+  +INGK  DLS P++EG   I+    
Sbjct: 10  IKLKDQSSYEMPSGSTAKDLADKLNLKGPHEALGASINGKTVDLSYPLQEGDQVILWGFN 69

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           DP    +  H+ AH++A+A+  +WP+ Q  IGP IE+GFYYDF      S  +  +IEK+
Sbjct: 70  DPEGKEIFWHTSAHVLAQAILRLWPDAQPTIGPPIENGFYYDFA-NLTISDADFEKIEKE 128

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           MQ II+ +    ++ +S  K+  L + +   YK E++ S   +  +T YRQGE++DLCRG
Sbjct: 129 MQAIISENFQIKREVIST-KSDALKQFQNNPYKCELINSFEDESTLTGYRQGEFYDLCRG 187

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PH+ + G++K   KLMK AGAYWRGDSN+ ML+RIY  ++  ++ L  YL+ LEE++KRD
Sbjct: 188 PHLFNLGKIK-ALKLMKTAGAYWRGDSNKEMLTRIYAISFPDRKLLKDYLHQLEEAKKRD 246

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHL 304
           H+ L  ++DLF + E+  G+ F H KG  ++  L++Y+R  +   DY EI TP ++ + L
Sbjct: 247 HKLLGAKLDLFSLKEEAPGMPFIHPKGLIVWNQLVAYIRECLSRHDYIEIKTPTMMTKEL 306

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W+ SGHW +YR NMF  +  D      R FA+KPMNCPG +  +     SYRELP+R+AE
Sbjct: 307 WEISGHWGNYRQNMFISQIED------RDFAIKPMNCPGCMLYYKSHTHSYRELPLRIAE 360

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
            G+V+R EPSGSL GL RVR F QDDAH+F     +  E L +  L   IY  FG    +
Sbjct: 361 IGNVHRYEPSGSLSGLFRVRSFHQDDAHIFMKPSDIQQEILGVLALADEIYSTFGLSYRL 420

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
              +   +  +G+D  W+ A   +KG LD +           +  G+GAFYGPK ++ ++
Sbjct: 421 ELSTRPEKNTIGTDHEWEVATAGLKGALDEMGK------EYRINEGDGAFYGPKIDFHIR 474

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           DAI R WQCGTIQ+D  LP +F   Y  S   +  PVMIHRA+FGSIERF GI+IE++ G
Sbjct: 475 DAINRSWQCGTIQLDMALPEKFELEYTFSDGTRQRPVMIHRAIFGSIERFFGILIEHYVG 534

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             PLWLSP Q    T+      YA+E+A   K+    ++ D   E+++ K+R   + +  
Sbjct: 535 KFPLWLSPSQIRFITVADRHEPYARELAKRFKNAGFHVDVDSTQESVSKKVRNAQLAQFN 594

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
            I+  GD+E   ++  +R   +    ++ + + I  L  E 
Sbjct: 595 YILTIGDQEVEHKTANLRTRDNVVHGEIQIDEFIQKLEIEK 635


>gi|296270051|ref|YP_003652683.1| threonyl-tRNA synthetase [Thermobispora bispora DSM 43833]
 gi|296092838|gb|ADG88790.1| threonyl-tRNA synthetase [Thermobispora bispora DSM 43833]
          Length = 657

 Score =  590 bits (1521), Expect = e-166,   Method: Composition-based stats.
 Identities = 257/667 (38%), Positives = 386/667 (57%), Gaps = 44/667 (6%)

Query: 1   MPS--DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS 58
           M S  +I++T   G+ +      T     E+      +  +A  ING++ DL+  V +G 
Sbjct: 1   MSSAQEIRITIA-GTERVVAAGTTAGQALEA----DGRTVIAARINGELRDLATEVADGD 55

Query: 59  -IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSD 117
            IE +T +     A++RHS AH++A+AVQ ++PE ++ IGP IE+GFYYDFD  +PF+ +
Sbjct: 56  VIEPVTIDSGDGRAILRHSTAHVLAQAVQELFPEAKLGIGPPIENGFYYDFDVREPFTPE 115

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKE-------- 169
           +L +IEK+M+EII +   F ++ ++ E+ARE  E   E YK+E++E   A          
Sbjct: 116 DLKRIEKRMREIIKQGQLFRRRPVTDEQARE--ELAGEPYKLELIELKGAAGSEDGANVE 173

Query: 170 ----NVTLYRQGE-------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLS 218
                +T+Y   +       W DLCRGPH+ ST  +  F  +    GAYWRG    P L 
Sbjct: 174 VGAGQLTIYDNIDPKTGEVCWKDLCRGPHLPSTKAIPAFALMRSS-GAYWRGSEKNPQLQ 232

Query: 219 RIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQ 277
           RIYGTAW ++++  +YL+FLEE+EKRDHR+L  E+DLF   E+ GSG+  +H KG  I +
Sbjct: 233 RIYGTAWESKEKQDEYLHFLEEAEKRDHRRLGVELDLFSFPEELGSGLPVFHPKGGTIRR 292

Query: 278 TLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFAL 336
            +  Y RR+ ++  Y  +NTP +  + L+Q SGH + Y   MF          +   + L
Sbjct: 293 IMEDYSRRRHEEAGYSFVNTPHITKEKLYQISGHLNWYADAMFPPMEL-----EGARYYL 347

Query: 337 KPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT 396
           KPMNCP H  +F    +SYRELP+RL EFG+VYR E SG +HGL RVRG TQDDAH++CT
Sbjct: 348 KPMNCPMHNLIFRARGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRVRGLTQDDAHIYCT 407

Query: 397 KEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDTI 455
           +EQM +E   +   ++ + +DFG     ++LST+  +  VGSD +W++A   ++ V +  
Sbjct: 408 QEQMRDELRSLLRFVLDLLRDFGLNDFYLELSTKDPEKYVGSDEVWEEATRTLREVAEA- 466

Query: 456 KNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS 515
                + +   +  G  AFYGPK     +DAIGR WQ  TIQ+DFNLP  F   Y  +  
Sbjct: 467 -----ENLELVLDPGGAAFYGPKISVQARDAIGRTWQMSTIQLDFNLPELFELEYQAADG 521

Query: 516 EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLL 575
            +  PVMIHRA+FGSIERF G+++E++ G  P WL+P+Q +   IT + V Y Q++A  L
Sbjct: 522 TRKRPVMIHRALFGSIERFFGVLVEHYAGAFPPWLAPVQVVGIPITEAHVPYLQDVAKRL 581

Query: 576 KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
           +   + +E D  ++ +  KIR     K+P +++ GDK+ +  ++  R         V + 
Sbjct: 582 RERRIRVEVDASDDRMQKKIRNAQKAKVPYMLLAGDKDVAAGAVSFRYRNGEQKNGVPID 641

Query: 636 DAIPILT 642
            AI  + 
Sbjct: 642 QAIEEIV 648


>gi|71984184|ref|NP_001022033.1| Threonyl tRNA Synthetase family member (trs-1) [Caenorhabditis
           elegans]
 gi|1711653|sp|P52709|SYTC_CAEEL RecName: Full=Threonyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|3875006|emb|CAA93762.1| C. elegans protein C47D12.6a, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 725

 Score =  590 bits (1521), Expect = e-166,   Method: Composition-based stats.
 Identities = 222/647 (34%), Positives = 353/647 (54%), Gaps = 21/647 (3%)

Query: 2   PSDIKLTFPDGSIKNF-PVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
              I++T PDG I        T  ++AE IS+ LA+ AV   +NG V DL  P      +
Sbjct: 79  SEPIQITLPDGKIHEGKTWRTTPFEIAERISKGLAEAAVIAKVNGAVWDLDRPFEGNAKL 138

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDE 118
           E++  +D  +  V  HS AH++ EA++  +    +  GP I++GFYYD + + +    D+
Sbjct: 139 ELLKFDDDEAKQVFWHSSAHVLGEAMER-YCGGHLCYGPPIQEGFYYDMWHENRTICPDD 197

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
             +I++ ++  +     F +  ++ E   E+F+     +KV I+         T+YR G 
Sbjct: 198 FPKIDQIVKAAVKDKQKFERLEMTKEDLLEMFKY--NEFKVRIITEKIHTPKTTVYRCGP 255

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLCRGPHVR TG+VK    + K + +YW G ++   L R+YG ++   ++L ++    
Sbjct: 256 LIDLCRGPHVRHTGKVK-AMAITKNSSSYWEGKADAESLQRLYGISFPDSKQLKEWQKLQ 314

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRKL +E DLF   +   G  FW+ KG  I+  L+ ++R++ +   + E+ TP
Sbjct: 315 EEAAKRDHRKLGKEHDLFFFHQLSPGSAFWYPKGAHIYNKLVDFIRKQYRRRGFTEVITP 374

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + ++ LW+ SGHW  Y  +MF ++       +   F LKPMNCPGH  +F H   +Y E
Sbjct: 375 NMYNKKLWETSGHWQHYSEDMFKIEV------EKEEFGLKPMNCPGHCLMFGHMPHTYNE 428

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP R A+FG ++RNE SG+L GL RVR F QDDAH+FC ++Q+  E  +  + +   Y+ 
Sbjct: 429 LPFRFADFGVLHRNEMSGALTGLTRVRRFQQDDAHIFCRQDQISEEIKQCLDFLEYAYEK 488

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
                  + LSTRPE  +G+   WD AE  +   L+             +  G+GAFYGP
Sbjct: 489 VFGFTFKLNLSTRPEGFLGNIETWDKAEADLTNALNASGRKW------VLNPGDGAFYGP 542

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  ++DA+ R++QC TIQ+DF LP++F+  Y +   EK  PVMIHRAV GS+ER   I
Sbjct: 543 KIDITIQDALKRNFQCATIQLDFQLPNQFDLSYFDEKGEKQRPVMIHRAVLGSVERMTAI 602

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIR 596
           + E++ G  P WLSP Q  + T+  S  +YA ++   +      IE +    +T+N ++R
Sbjct: 603 LTESYGGKWPFWLSPRQCKIITVHESVRDYANDVKKQIFEAGFEIEYEENCGDTMNKQVR 662

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  + +   I++ G KE    ++ +R   +    +V+L   I    +
Sbjct: 663 KAQLAQFNFILVIGAKEKENGTVNVRTRDNAVRGEVALDKLISKFRR 709


>gi|225028654|ref|ZP_03717846.1| hypothetical protein EUBHAL_02933 [Eubacterium hallii DSM 3353]
 gi|224954040|gb|EEG35249.1| hypothetical protein EUBHAL_02933 [Eubacterium hallii DSM 3353]
          Length = 591

 Score =  590 bits (1521), Expect = e-166,   Method: Composition-based stats.
 Identities = 264/590 (44%), Positives = 382/590 (64%), Gaps = 21/590 (3%)

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
             E+        H+ AH++A+AV+ ++P+ + AIGP I++GFYYDFD   PF+ + LA I
Sbjct: 14  NFEEKEVKEAFWHTSAHVLAQAVKRLYPDTKCAIGPAIDNGFYYDFDFSFPFTEENLAAI 73

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M++I+ +  P     ++ EKA +  + ++E YKVE++E +P  E +T Y+QG++ + 
Sbjct: 74  EKEMKKIVKQSLPLEVFEVTKEKALDYMKERQEDYKVEMIEELPEGETITFYKQGDYEEF 133

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPHV +T  V K  KL+  AGAYWRGD    ML+RIYG ++    EL  YL  LEE++
Sbjct: 134 CAGPHVSNT-CVIKAIKLLSTAGAYWRGDEKNKMLTRIYGISFPKAAELKDYLNMLEEAK 192

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KRDHRKL +E+ LF I E+G G  F+  KG  +  TLI Y R+   ++ YEEI+TP +L+
Sbjct: 193 KRDHRKLGKELGLFTIMEEGPGFPFFLPKGMILKNTLIDYWRKMHTREGYEEISTPILLN 252

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHWD YR NM+       T+ D   FA+KPMNCPG + V+    +SY+ELP+R
Sbjct: 253 RQLWETSGHWDHYRENMYT------TVIDDMDFAVKPMNCPGGMLVYKMEPRSYKELPLR 306

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           L E G V+R+E SG LHGLMRVR FTQDDAH+F T+ Q+ NE  K+  LI  +YK FGF 
Sbjct: 307 LGELGLVHRHEKSGQLHGLMRVRCFTQDDAHIFMTEAQIENEIQKVVKLIDEVYKKFGFT 366

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRP   +G++  W+ A N ++  +  +       I   V  G+GAFYGPK ++
Sbjct: 367 YH-VELSTRPADSMGTEEEWEVATNALENAIKAMN------IPYEVNEGDGAFYGPKLDF 419

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L+D+IGR WQCGTIQ+DF LP RF A Y+ +  EK  P+MIHR VFGSIERFIGI+IE+
Sbjct: 420 HLQDSIGRTWQCGTIQLDFQLPQRFEAEYIGADGEKHRPIMIHRVVFGSIERFIGILIEH 479

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  P WL+P+QA V  ++    +YA+++A  LK+  + +E D R+E + YKIR+  ++
Sbjct: 480 YAGKFPTWLAPVQAKVLPVSDKFADYAKQVAEALKASGVRVEVDDRDEKLGYKIRQAQLQ 539

Query: 602 KIPIIIICGDKEASERSIGIRRF------GSTTTQKVSLLDAIPILTKES 645
           K+P ++I G+KE S  ++ +R+        S     +S+ +   I+ +ES
Sbjct: 540 KVPYMLILGEKEQSAGTVSVRKRDLIDENDSPELGTMSVEEFAAIIKEES 589


>gi|114600754|ref|XP_001153291.1| PREDICTED: threonyl-tRNA synthetase, cytoplasmic isoform 1 [Pan
           troglodytes]
          Length = 619

 Score =  590 bits (1520), Expect = e-166,   Method: Composition-based stats.
 Identities = 233/620 (37%), Positives = 348/620 (56%), Gaps = 22/620 (3%)

Query: 29  SISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQS 87
            +S+ LA   V   +N  V DL  P+  + S+E++  ED  + AV  HS AHIM EA++ 
Sbjct: 4   ELSQGLADNTVIAKVNNLVWDLDRPLEEDCSLELLKFEDEEAQAVYWHSSAHIMGEAMER 63

Query: 88  IWPEVQVAIGPIIEDGFYYDFDKEQP-FSSDELAQIEKKMQEIIARDSPFLKQYLSHEKA 146
           ++    +  GP IE+GFYYD   E+   SS++ + +E   ++II     F +  +  E  
Sbjct: 64  VYGGC-LCYGPPIENGFYYDMYLEEGGVSSNDFSSLEALCKKIIKEKQAFERLEVKKETL 122

Query: 147 RELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGA 206
             +F+     +K  IL         T+YR G   DLCRGPHVR TG++K   K+ K +  
Sbjct: 123 LAMFKY--NKFKCRILNEKVNTPTTTVYRCGPLIDLCRGPHVRHTGKIK-ALKIHKNSST 179

Query: 207 YWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVI 266
           YW G ++   L RIYG ++   + L ++  F EE++ RDHRK+ R+ +L+   E   G  
Sbjct: 180 YWEGKADMETLQRIYGISFPDPKMLKEWEKFQEEAKNRDHRKIGRDQELYFFHELSPGSC 239

Query: 267 FWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD 325
           F+  KG  I+  LI ++R + +   ++E+ TP + +  LW  SGHW  Y  NMF+ +   
Sbjct: 240 FFLPKGAYIYNALIEFIRSEYRKRGFQEVVTPNIFNSRLWMTSGHWQHYSENMFSFEV-- 297

Query: 326 DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRG 385
               +   FALKPMNCPGH  +F+H  +S+RELP+RLA+FG ++RNE SG+L GL RVR 
Sbjct: 298 ----EKELFALKPMNCPGHCLMFDHRPRSWRELPLRLADFGVLHRNELSGALTGLTRVRR 353

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
           F QDDAH+FC  EQ+ +E     + + ++Y  FGF   +  LSTRPEK +G   +WD AE
Sbjct: 354 FQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSVFGFSFKLN-LSTRPEKFLGDIEVWDQAE 412

Query: 446 NIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSR 505
             ++  L+      +      +  G+GAFYGPK +  +KDAIGR  QC TIQ+DF LP R
Sbjct: 413 KQLENSLNEFGEKWE------LNSGDGAFYGPKIDIQIKDAIGRYHQCATIQLDFQLPIR 466

Query: 506 FNAFYVNSHS-EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA 564
           FN  YV+    +K  PV++HRA+ GS+ER I I+ EN+ G  P WLSP Q +V  +  + 
Sbjct: 467 FNLTYVSHDGDDKKRPVIVHRAILGSVERMIAILTENYGGKWPFWLSPRQVMVVPVGPTC 526

Query: 565 VEYAQEIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRR 623
            EYAQ++           + D     T+N KIR   + +   I++ G+KE    ++ IR 
Sbjct: 527 DEYAQKVRQQFHDAKFMADIDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKISGTVNIRT 586

Query: 624 FGSTTTQKVSLLDAIPILTK 643
             +    + ++ + I  L +
Sbjct: 587 RDNKVHGERTISETIERLQQ 606


>gi|323337178|gb|EGA78432.1| Ths1p [Saccharomyces cerevisiae Vin13]
          Length = 734

 Score =  590 bits (1520), Expect = e-166,   Method: Composition-based stats.
 Identities = 237/670 (35%), Positives = 356/670 (53%), Gaps = 44/670 (6%)

Query: 1   MPS-DIKLTFPDGSIKN-FPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR--- 55
           MP   +K+   DG++K       T  D+A+ IS+SLA +     +NG++ DL  P     
Sbjct: 70  MPRVPLKIVLKDGAVKEATSWETTPMDIAKGISKSLADRLCISKVNGQLWDLDRPFEGEA 129

Query: 56  --EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK--- 110
             E  +E++  E      V  HS AH++ E+ +       + +GP  +DGF+Y+      
Sbjct: 130 NEEIKLELLDFESDEGKKVFWHSSAHVLGESCECHL-GAHICLGPPTDDGFFYEMAVRDS 188

Query: 111 --------EQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL 162
                   E+  S  +   +E   + +I +   F +  +S E   ++       YK  ++
Sbjct: 189 MKDISESPERTVSQADFPGLEGVAKNVIKQKQKFERLVMSKEDLLKM--FHYSKYKTYLV 246

Query: 163 E-SIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIY 221
           +  +P     T+YR G+  DLC GPH+  TG++K F KL+K +  Y+ GD+    L R+Y
Sbjct: 247 QTKVPDGGATTVYRCGKLIDLCVGPHIPHTGRIKAF-KLLKNSSCYFLGDATNDSLQRVY 305

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLIS 281
           G ++  ++ +  +L FL E+  RDHRK+ +E +LF   E   G  FW   G +I+ TL+ 
Sbjct: 306 GISFPDKKLMDAHLKFLAEASMRDHRKIGKEQELFLFNEMSPGSCFWLPHGTRIYNTLVD 365

Query: 282 YMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
            +R + +   YEE+ TP + +  LW+ SGHW +Y+ NMF  +       +  TF LKPMN
Sbjct: 366 LLRTEYRKRGYEEVITPNMYNSKLWETSGHWANYKENMFTFEV------EKETFGLKPMN 419

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
           CPGH  +F    +SYRELP R+A+FG ++RNE SG+L GL RVR F QDDAH+FCT +Q+
Sbjct: 420 CPGHCLMFKSRERSYRELPWRVADFGVIHRNEFSGALSGLTRVRRFQQDDAHIFCTHDQI 479

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQ 460
            +E   I N +  IY  FGFE  M +LSTRPEK VG    WD AE+ ++  L       +
Sbjct: 480 ESEIENIFNFLQYIYGVFGFEFKM-ELSTRPEKYVGKIETWDAAESKLESALK------K 532

Query: 461 DRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH---SEK 517
              N  +  G+GAFYGPK + ++ DA+ R  QC TIQ+DF LP+RF   + +        
Sbjct: 533 WGGNWEINAGDGAFYGPKIDIMISDALRRWHQCATIQLDFQLPNRFELEFKSKDQDSESY 592

Query: 518 CHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKS 577
             PVMIHRA+ GS+ER   I+ E+F G  P WLSP Q +V  +      YA+++ N L  
Sbjct: 593 ERPVMIHRAILGSVERMTAILTEHFAGKWPFWLSPRQVLVVPVGVKYQGYAEDVRNKLHD 652

Query: 578 HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ----KVS 633
                + D    T+  K+R   + K   I I G++E +E+S+ IR       Q     VS
Sbjct: 653 AGFYADVDLTGNTLQKKVRNGQMLKYNFIFIVGEQEMNEKSVNIRNRDVMEQQGKNATVS 712

Query: 634 LLDAIPILTK 643
           + + +  L  
Sbjct: 713 VEEVLKQLRN 722


>gi|317487453|ref|ZP_07946240.1| threonyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
 gi|316921312|gb|EFV42611.1| threonyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
          Length = 646

 Score =  590 bits (1520), Expect = e-166,   Method: Composition-based stats.
 Identities = 266/644 (41%), Positives = 385/644 (59%), Gaps = 22/644 (3%)

Query: 12  GSIKNFPVHATGSDVAES-ISRSLAKKAVAVAINGKVCDLS----DPVREGSIEIITPED 66
           G +      A+ +D  +  +S    K A+A      + DL+          ++  +T + 
Sbjct: 7   GKMVEVSDGASCADALKEGLSGKRFKAAIACKAGDTLLDLTAPVPTTTETLTLTPVTADT 66

Query: 67  PRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKM 126
           P  L +IRHS AH+MA AV+ ++P  +V IGP IE+GFYYDFD E PFS D+   IE +M
Sbjct: 67  PEGLGLIRHSAAHVMAAAVKKLFPAAKVTIGPSIENGFYYDFDVETPFSPDQFEAIEAEM 126

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGP 186
           Q II    PF +  +S   A +LF    E YKVE++E +     +TLYR G++ DLCRGP
Sbjct: 127 QRIIDAAVPFERMDISKADAVKLFNDMGEPYKVELIEGL-EDGTITLYRNGDFVDLCRGP 185

Query: 187 HVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDH 246
           H+ + G VK F KL+ VAGAYWRGD    MLSRIY TA+   ++L +YL  +EE+++RDH
Sbjct: 186 HIPNAGFVKAF-KLLSVAGAYWRGDEKNRMLSRIYATAFADAKDLKEYLNRIEEAKRRDH 244

Query: 247 RKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHL 304
           RKL +E+DLF   ED  +G++FW  KG  +   L  ++RR+  K  Y+ +  PQVL + L
Sbjct: 245 RKLGKELDLFAFHEDVAAGMVFWLPKGMLLRTILEDFLRREHIKRGYQLVQGPQVLRREL 304

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W+QSGH+ +YR NM+  +   D       + +KPMNC  H+ ++N  L+SYRELP R  E
Sbjct: 305 WEQSGHYANYRENMYFTEIEGDM------YGIKPMNCVSHMLIYNAHLRSYRELPQRYFE 358

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
            G V+R+E SG LHGL+RVR FTQDDAH+ C  EQ+ +E + +  L+  +   FGF+   
Sbjct: 359 LGVVHRHEKSGVLHGLLRVRQFTQDDAHIICAPEQLEDEIIGVIALVRDLMALFGFQY-R 417

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           V +ST+P K +GSD  W+ A N +   ++         ++  +  G+GAFYGPK +  + 
Sbjct: 418 VVISTKPAKAIGSDEAWELATNALIKAVERAN------LSYTINAGDGAFYGPKIDVKVT 471

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           DAIGR+WQ  TIQ DF LP RF   YV    E+  PVM+HRA+ GS+ERFIG++ E++ G
Sbjct: 472 DAIGREWQLSTIQCDFTLPERFELEYVGQDGERHRPVMVHRAILGSLERFIGVLTEHYAG 531

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P WL+P+QA + T+T +   +A+E    L+   +  E D RNE + +K+RE  + KIP
Sbjct: 532 AFPTWLAPVQAKILTVTDAQNAFAEEACEALRKQGIRAEVDTRNEKLGFKVREAQLAKIP 591

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
            I++ GDKE   RS+ +R          SL +   ++ ++   P
Sbjct: 592 YILVVGDKEVEARSVNVRLRTGENLGVKSLDEVAALVQEDCAEP 635


>gi|260103159|ref|ZP_05753396.1| threonine-tRNA ligase [Lactobacillus helveticus DSM 20075]
 gi|260083018|gb|EEW67138.1| threonine-tRNA ligase [Lactobacillus helveticus DSM 20075]
          Length = 644

 Score =  590 bits (1520), Expect = e-166,   Method: Composition-based stats.
 Identities = 227/644 (35%), Positives = 358/644 (55%), Gaps = 22/644 (3%)

Query: 6   KLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITP 64
            +T PDGS K+F    T +D+A++I+ SL K AVA  +NG++  L   +  +  + IIT 
Sbjct: 4   SITLPDGSKKDFEESLTIADLAQNIATSLGKAAVAGKVNGELKPLDYKLDSDSEVAIITN 63

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           +D   L V+R + A +     +  +PE+++      EDGFY D DK+      EL ++EK
Sbjct: 64  KDEEGLDVLRATAAFVFEAVAKCEYPELRLGEHVADEDGFYVDTDKDDQIKVGELPKLEK 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
            MQ++I          ++  +  +L++   + +K E+L  +   + V  Y+ G++ D   
Sbjct: 124 AMQKVIKNGEKIEHVQIAKSELEDLYK--NDKFKSELLAKV-EGDTVDAYKLGDFVDFGF 180

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
              + +TG++K+F KL+ VAGAYW G S+ PML RI+GTA+  + +L   L   +E ++R
Sbjct: 181 DALLPNTGKIKQF-KLLSVAGAYWLGKSSNPMLQRIFGTAFFKEADLKADLKRRQEIKER 239

Query: 245 DHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQ 302
           DHR + R++DLF +      G+ +W  KG  I + +  Y+  R++ D Y+ + TP +++ 
Sbjct: 240 DHRTIGRDLDLFFVDPKVGAGLPYWMPKGATIRRVVERYIIDREVADGYQHVYTPVLMNL 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             ++ SGHW  YR +MF          D     L+PMNCP H+ +F H ++SYR+LP+R+
Sbjct: 300 DAYKTSGHWAHYRDDMFPPMDMG----DGEMLELRPMNCPSHIQIFKHHIRSYRDLPLRV 355

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AE G ++R E SG+L GL RVR  T +D H F   +Q+  E  KI  LI+ +YKDF    
Sbjct: 356 AELGMMHRYEKSGALSGLQRVREMTLNDGHTFVVLDQVQTEFAKILKLIMEVYKDFDITD 415

Query: 423 IMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
              +LS R  K       +D +W+ ++ ++KG +D +       ++     GE AFYGPK
Sbjct: 416 YYFRLSYRDPKNTDKYFANDEMWEKSQKMLKGAMDDLG------LDYVEAEGEAAFYGPK 469

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +   K A+G D    TIQ+DF LP RF   YV    E+  PVMIHR + G++ERFI  +
Sbjct: 470 LDIQTKTALGNDETMSTIQLDFMLPDRFGLTYVGKDGEEHRPVMIHRGIVGTMERFIAYL 529

Query: 539 IENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
            E +KG  P WL+P+QA +  + +    EYA+++   L      +E D RNE + YKIRE
Sbjct: 530 TEIYKGAFPTWLAPVQAEIIPVNNEAHGEYAEKVRAELAKRGFRVEVDDRNEKMGYKIRE 589

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
              +K+P  ++ GD+E     + +RR+G+      SL D I  +
Sbjct: 590 SQTQKVPYTLVLGDEEMKSGKVNLRRYGTDEEISKSLDDFINEI 633


>gi|71984192|ref|NP_001022034.1| Threonyl tRNA Synthetase family member (trs-1) [Caenorhabditis
           elegans]
 gi|30145813|emb|CAD89723.1| C. elegans protein C47D12.6b, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 684

 Score =  590 bits (1520), Expect = e-166,   Method: Composition-based stats.
 Identities = 222/647 (34%), Positives = 353/647 (54%), Gaps = 21/647 (3%)

Query: 2   PSDIKLTFPDGSIKNF-PVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
              I++T PDG I        T  ++AE IS+ LA+ AV   +NG V DL  P      +
Sbjct: 38  SEPIQITLPDGKIHEGKTWRTTPFEIAERISKGLAEAAVIAKVNGAVWDLDRPFEGNAKL 97

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDE 118
           E++  +D  +  V  HS AH++ EA++  +    +  GP I++GFYYD + + +    D+
Sbjct: 98  ELLKFDDDEAKQVFWHSSAHVLGEAMER-YCGGHLCYGPPIQEGFYYDMWHENRTICPDD 156

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
             +I++ ++  +     F +  ++ E   E+F+     +KV I+         T+YR G 
Sbjct: 157 FPKIDQIVKAAVKDKQKFERLEMTKEDLLEMFKY--NEFKVRIITEKIHTPKTTVYRCGP 214

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLCRGPHVR TG+VK    + K + +YW G ++   L R+YG ++   ++L ++    
Sbjct: 215 LIDLCRGPHVRHTGKVK-AMAITKNSSSYWEGKADAESLQRLYGISFPDSKQLKEWQKLQ 273

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRKL +E DLF   +   G  FW+ KG  I+  L+ ++R++ +   + E+ TP
Sbjct: 274 EEAAKRDHRKLGKEHDLFFFHQLSPGSAFWYPKGAHIYNKLVDFIRKQYRRRGFTEVITP 333

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + ++ LW+ SGHW  Y  +MF ++       +   F LKPMNCPGH  +F H   +Y E
Sbjct: 334 NMYNKKLWETSGHWQHYSEDMFKIEV------EKEEFGLKPMNCPGHCLMFGHMPHTYNE 387

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP R A+FG ++RNE SG+L GL RVR F QDDAH+FC ++Q+  E  +  + +   Y+ 
Sbjct: 388 LPFRFADFGVLHRNEMSGALTGLTRVRRFQQDDAHIFCRQDQISEEIKQCLDFLEYAYEK 447

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
                  + LSTRPE  +G+   WD AE  +   L+             +  G+GAFYGP
Sbjct: 448 VFGFTFKLNLSTRPEGFLGNIETWDKAEADLTNALNASGRKW------VLNPGDGAFYGP 501

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  ++DA+ R++QC TIQ+DF LP++F+  Y +   EK  PVMIHRAV GS+ER   I
Sbjct: 502 KIDITIQDALKRNFQCATIQLDFQLPNQFDLSYFDEKGEKQRPVMIHRAVLGSVERMTAI 561

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIR 596
           + E++ G  P WLSP Q  + T+  S  +YA ++   +      IE +    +T+N ++R
Sbjct: 562 LTESYGGKWPFWLSPRQCKIITVHESVRDYANDVKKQIFEAGFEIEYEENCGDTMNKQVR 621

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  + +   I++ G KE    ++ +R   +    +V+L   I    +
Sbjct: 622 KAQLAQFNFILVIGAKEKENGTVNVRTRDNAVRGEVALDKLISKFRR 668


>gi|161507864|ref|YP_001577828.1| theronyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
 gi|172048343|sp|A8YWE1|SYT_LACH4 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|160348853|gb|ABX27527.1| Theronyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
          Length = 644

 Score =  589 bits (1519), Expect = e-166,   Method: Composition-based stats.
 Identities = 227/644 (35%), Positives = 357/644 (55%), Gaps = 22/644 (3%)

Query: 6   KLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITP 64
            +T PDGS K+F    T +D+A++I+ SL K AVA  +NG++  L   +  +  + IIT 
Sbjct: 4   SITLPDGSKKDFEESLTIADLAQNIATSLGKAAVAGKVNGELKPLDYKLDSDSEVAIITN 63

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           +D   L V+R + A +     +  +PE+++      E GFY D DK+      EL ++EK
Sbjct: 64  KDEEGLDVLRATAAFVFEAVAKCEYPELRLGEHVADEGGFYVDTDKDDQIKVGELPKLEK 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
            MQ++I          ++  +  EL++   + +K E+L  +   + V  Y+ G++ D   
Sbjct: 124 AMQKVIKNGEKIEHVQIAKSELEELYK--NDKFKSELLAKV-EGDTVDAYKLGDFVDFGF 180

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
              + +TG++K+F KL+ VAGAYW G S+ PML RI+GTA+  + +L   L   +E ++R
Sbjct: 181 DALLPNTGKIKQF-KLLSVAGAYWLGKSSNPMLQRIFGTAFFKEADLKADLKRRQEIKER 239

Query: 245 DHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQ 302
           DHR + R++DLF +      G+ +W  KG  I + +  Y+  R++ D Y+ + TP +++ 
Sbjct: 240 DHRTIGRDLDLFFVDPKVGAGLPYWMPKGATIRRAVERYIIDREVADGYQHVYTPVLMNL 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             ++ SGHW  YR +MF          D     L+PMNCP H+ +F H ++SYR+LP+R+
Sbjct: 300 DAYKTSGHWAHYRDDMFPPMDMG----DGEMLELRPMNCPSHIQIFKHHIRSYRDLPLRV 355

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AE G ++R E SG+L GL RVR  T +D H F   +Q+  E  KI  LI+ +YKDF    
Sbjct: 356 AELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQVQTEFAKILKLIMEVYKDFDITD 415

Query: 423 IMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
              +LS R  K       +D +W+ ++ ++KG +D +       ++     GE AFYGPK
Sbjct: 416 YYFRLSYRDPKNTDKYFANDEMWEKSQKMLKGAMDDLG------LDYVEAEGEAAFYGPK 469

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +   K A+G D    TIQ+DF LP RF   YV    E+  PVMIHR + G++ERFI  +
Sbjct: 470 LDIQTKTALGNDETMSTIQLDFMLPDRFGLTYVGKDGEEHRPVMIHRGIVGTMERFIAYL 529

Query: 539 IENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
            E +KG  P WL+P+QA +  + +    EYA+++   L      +E D RNE + YKIRE
Sbjct: 530 TEIYKGAFPTWLAPVQAEIIPVNNEAHGEYAEKVRAELAKRGFRVEVDDRNEKMGYKIRE 589

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
              +K+P  ++ GD+E     + +RR+G+      SL D I  +
Sbjct: 590 SQTQKVPYTLVLGDEEMKSGKVNLRRYGTDEEISKSLDDFINEI 633


>gi|294655282|ref|XP_002770111.1| DEHA2B10252p [Debaryomyces hansenii CBS767]
 gi|199429831|emb|CAR65481.1| DEHA2B10252p [Debaryomyces hansenii]
          Length = 733

 Score =  589 bits (1519), Expect = e-166,   Method: Composition-based stats.
 Identities = 238/666 (35%), Positives = 373/666 (56%), Gaps = 34/666 (5%)

Query: 3   SDIKLTFPDGSIKNFPV-HATGSDVAESISRSLAKKAVAVAINGK-VCDLSDPVR-EGSI 59
             I++T  DGS+K       +  ++A SI +S A++ V   +NG+ + DL  P+  +  +
Sbjct: 79  KPIQITLKDGSVKEGTSYETSPMEIATSIGKSFAERQVISKVNGEQLWDLERPLEGDVKL 138

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF---DKEQPFSS 116
           + +  E P   +V  HS AH++ E+ +  +    ++ GP  +DGF+YD    + E   + 
Sbjct: 139 DFLDFEHPEGKSVFWHSSAHVLGESCECHY-GCHLSHGPPTDDGFFYDMSINNGEGAVTQ 197

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYR 175
            +   +EK   + I     F++  ++ E   ++       YKV+ + + IP   + T+YR
Sbjct: 198 ADFGNLEKVSTKAIKEKQKFVRLEMTKEDLLKM--FSYNKYKVQFISDKIPDGTSTTVYR 255

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
            G   DLC GPH+  TG++K F K++K + +Y+ GD+    L R+YG ++  ++ + ++L
Sbjct: 256 CGPLIDLCVGPHIPHTGKIKAF-KVLKNSSSYFLGDAANDSLQRVYGISFPDKKLMDEHL 314

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEI 294
            FL+E+ +RDHR++ +E +LF   E   G  FW   G +I+ TL   MR++  +  Y+E+
Sbjct: 315 KFLKEASERDHRRIGKEQELFTFNEMSPGSAFWLPHGTRIYNTLTDLMRKEYRQRGYDEV 374

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
            TP + +  LW+ SGHW +Y+ NMF+ +       +  TF LKPMNCPGH  +F    +S
Sbjct: 375 ITPNMYNSKLWETSGHWGNYKENMFSFEV------EKETFGLKPMNCPGHCLMFKSRERS 428

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YRELP R+A+FG ++RNE SG+L GL RVR F QDDAH+FCT+EQ+ +E   + + +  I
Sbjct: 429 YRELPWRVADFGVIHRNELSGALSGLTRVRRFQQDDAHIFCTQEQIESEIGGVFDFLQKI 488

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           Y  FGFE  M +LSTRPEK VG    W++AE  ++  L+T     +  +N     G+GAF
Sbjct: 489 YGVFGFEFKM-ELSTRPEKYVGDIETWNNAEANLENALNTFLGKGKWELN----PGDGAF 543

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK----CHPVMIHRAVFGS 530
           YGPK + ++ DA+ R +QC TIQ+DF LP+RF   Y    ++K      PVMIHRA+ GS
Sbjct: 544 YGPKIDIMISDALKRWFQCATIQLDFQLPNRFELEYKAETNDKSNTIGRPVMIHRAILGS 603

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLL-KSHHLSIETDFRNE 589
           +ER   I+ E++KG  P WLSP Q +V  +     EYAQ + N L K +    + D    
Sbjct: 604 VERMTAILTEHYKGKWPFWLSPRQILVVPVGVKYFEYAQSLQNKLNKEYGFYADVDVSGN 663

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK----VSLLDAIPILTK-- 643
           T+  K+R   + K   I I G++E  ++ + +R       Q     V   D +  L K  
Sbjct: 664 TLQKKVRTGQVYKYNFIFIVGEQEQEQQGVNVRNRDIQEEQGKNDMVKFDDVVQQLIKLR 723

Query: 644 ESLPPD 649
           E +  D
Sbjct: 724 EEMRQD 729


>gi|193788250|dbj|BAG53144.1| unnamed protein product [Homo sapiens]
          Length = 619

 Score =  589 bits (1519), Expect = e-166,   Method: Composition-based stats.
 Identities = 233/620 (37%), Positives = 348/620 (56%), Gaps = 22/620 (3%)

Query: 29  SISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQS 87
            +S+ LA   V   +N  V DL  P+  + ++E++  ED  + AV  HS AHIM EA++ 
Sbjct: 4   ELSQGLADNTVIAKVNNVVWDLDRPLEEDCTLELLKFEDEEAQAVYWHSSAHIMGEAMER 63

Query: 88  IWPEVQVAIGPIIEDGFYYDFDKEQP-FSSDELAQIEKKMQEIIARDSPFLKQYLSHEKA 146
           ++    +  GP IE+GFYYD   E+   SS++ + +E   ++II     F +  +  E  
Sbjct: 64  VYGGC-LCYGPPIENGFYYDMYLEEGGVSSNDFSSLEALCKKIIKEKQAFERLEVKKETL 122

Query: 147 RELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGA 206
             +F+     +K  IL         T+YR G   DLCRGPHVR TG++K   K+ K +  
Sbjct: 123 LAMFKY--NKFKCRILNEKVNTPTTTVYRCGPLIDLCRGPHVRHTGKIK-ALKIHKNSST 179

Query: 207 YWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVI 266
           YW G ++   L RIYG ++   + L ++  F EE++ RDHRK+ R+ +L+   E   G  
Sbjct: 180 YWEGKADMETLQRIYGISFPDPKMLKEWEKFQEEAKNRDHRKIGRDQELYFFHELSPGSC 239

Query: 267 FWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD 325
           F+  KG  I+  LI ++R + +   ++E+ TP + +  LW  SGHW  Y  NMF+ +   
Sbjct: 240 FFLPKGAYIYNALIEFIRSEYRKRGFQEVVTPNIFNSRLWMTSGHWQHYSENMFSFEV-- 297

Query: 326 DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRG 385
               +   FALKPMNCPGH  +F+H  +S+RELP+RLA+FG ++RNE SG+L GL RVR 
Sbjct: 298 ----EKELFALKPMNCPGHCLMFDHRPRSWRELPLRLADFGVLHRNELSGALTGLTRVRR 353

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
           F QDDAH+FC  EQ+ +E     + + ++Y  FGF   +  LSTRPEK +G   +WD AE
Sbjct: 354 FQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSVFGFSFKLN-LSTRPEKFLGDIEVWDQAE 412

Query: 446 NIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSR 505
             ++  L+      +      +  G+GAFYGPK +  +KDAIGR  QC TIQ+DF LP R
Sbjct: 413 KQLENSLNEFGEKWE------LNSGDGAFYGPKIDIQIKDAIGRYHQCATIQLDFQLPIR 466

Query: 506 FNAFYVNSHS-EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA 564
           FN  YV+    +K  PV++HRA+ GS+ER I I+ EN+ G  P WLSP Q +V  +  + 
Sbjct: 467 FNLTYVSHDGDDKKRPVIVHRAILGSVERMIAILTENYGGKWPFWLSPRQVMVVPVGPTC 526

Query: 565 VEYAQEIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRR 623
            EYAQ++           + D     T+N KIR   + +   I++ G+KE    +I IR 
Sbjct: 527 DEYAQKVRQQFHDAKFMADIDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKISGTINIRT 586

Query: 624 FGSTTTQKVSLLDAIPILTK 643
             +    + ++ + I  L +
Sbjct: 587 RDNKVHGERTISETIERLQQ 606


>gi|190406293|gb|EDV09560.1| threonyl-tRNA synthetase [Saccharomyces cerevisiae RM11-1a]
 gi|259147177|emb|CAY80430.1| Ths1p [Saccharomyces cerevisiae EC1118]
 gi|323333154|gb|EGA74554.1| Ths1p [Saccharomyces cerevisiae AWRI796]
 gi|323354584|gb|EGA86420.1| Ths1p [Saccharomyces cerevisiae VL3]
          Length = 734

 Score =  589 bits (1518), Expect = e-166,   Method: Composition-based stats.
 Identities = 237/670 (35%), Positives = 356/670 (53%), Gaps = 44/670 (6%)

Query: 1   MPS-DIKLTFPDGSIKN-FPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR--- 55
           MP   +K+   DG++K       T  D+A+ IS+SLA +     +NG++ DL  P     
Sbjct: 70  MPRVPLKIVLKDGAVKEATSWETTPMDIAKGISKSLADRLCISKVNGQLWDLDRPFEGEA 129

Query: 56  --EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK--- 110
             E  +E++  E      V  HS AH++ E+ +       + +GP  +DGF+Y+      
Sbjct: 130 NEEIKLELLDFESDEGKKVFWHSSAHVLGESCECHL-GAHICLGPPTDDGFFYEMAVRDS 188

Query: 111 --------EQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL 162
                   E+  S  +   +E   + +I +   F +  +S E   ++       YK  ++
Sbjct: 189 MKDISESPERTVSQADFPGLEGVAKNVIKQKQKFERLVMSKEDLLKM--FHYSKYKTYLV 246

Query: 163 E-SIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIY 221
           +  +P     T+YR G+  DLC GPH+  TG++K F KL+K +  Y+ GD+    L R+Y
Sbjct: 247 QTKVPDGGATTVYRCGKLIDLCVGPHIPHTGRIKAF-KLLKNSSCYFLGDATNDSLQRVY 305

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLIS 281
           G ++  ++ +  +L FL E+  RDHRK+ +E +LF   E   G  FW   G +I+ TL+ 
Sbjct: 306 GISFPDKKLMDAHLKFLAEASMRDHRKIGKEQELFLFNEMSPGSCFWLPHGTRIYNTLVD 365

Query: 282 YMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
            +R + +   YEE+ TP + +  LW+ SGHW +Y+ NMF  +       +  TF LKPMN
Sbjct: 366 LLRTEYRKRGYEEVITPNMYNSKLWETSGHWANYKENMFTFEV------EKETFGLKPMN 419

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
           CPGH  +F    +SYRELP R+A+FG ++RNE SG+L GL RVR F QDDAH+FCT +Q+
Sbjct: 420 CPGHCLMFKSRERSYRELPWRVADFGVIHRNEFSGALSGLTRVRRFQQDDAHIFCTHDQI 479

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQ 460
            +E   I N +  IY  FGFE  M +LSTRPEK VG    WD AE+ ++  L       +
Sbjct: 480 ESEIENIFNFLQYIYGVFGFEFKM-ELSTRPEKYVGKIETWDAAESKLESALK------K 532

Query: 461 DRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH---SEK 517
              N  +  G+GAFYGPK + ++ DA+ R  QC TIQ+DF LP+RF   + +        
Sbjct: 533 WGGNWEINAGDGAFYGPKIDIMISDALRRWHQCATIQLDFQLPNRFELEFKSKDQDSESY 592

Query: 518 CHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKS 577
             PVMIHRA+ GS+ER   I+ E+F G  P WLSP Q +V  +      YA+++ N L  
Sbjct: 593 ERPVMIHRAILGSVERMTAILTEHFAGKWPFWLSPRQVLVVPVGVKYQGYAEDVRNKLHD 652

Query: 578 HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ----KVS 633
                + D    T+  K+R   + K   I I G++E +E+S+ IR       Q     VS
Sbjct: 653 AGFYADVDLTGNTLQKKVRNGQMLKYNFIFIVGEQEMNEKSVNIRNRDVMEQQGKNATVS 712

Query: 634 LLDAIPILTK 643
           + + +  L  
Sbjct: 713 VEEVLKQLRN 722


>gi|238924616|ref|YP_002938132.1| threonyl-tRNA synthetase [Eubacterium rectale ATCC 33656]
 gi|238876291|gb|ACR75998.1| threonyl-tRNA synthetase [Eubacterium rectale ATCC 33656]
          Length = 676

 Score =  589 bits (1518), Expect = e-166,   Method: Composition-based stats.
 Identities = 225/656 (34%), Positives = 355/656 (54%), Gaps = 18/656 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K+T  DGS K +    +  ++A+ IS  LA+ A A  ++G++ DL   + ++ ++ IIT
Sbjct: 20  MKITLKDGSSKEYSEAKSVYEIAKDISEGLARAACAGEVDGEIVDLRTVLDKDCTLNIIT 79

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
             D   L VIRH+ +H++A+AV++++P+ ++ IGP I+DGFYYDFD  QPFS ++L  +E
Sbjct: 80  ASDEEGLRVIRHTASHVLAQAVKNLFPDAKITIGPAIDDGFYYDFDS-QPFSREDLDALE 138

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M++II +     +  L  E+A +  + K E YKVE++E +P  E ++ Y QG + DLC
Sbjct: 139 AEMKKIIKQGHEITRFTLPREEAIKFMKEKDEPYKVELIEELPEGEEISFYDQGGFVDLC 198

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+ ST  VK F        AYWRGDSN+  L RIYGTA+N +++L  +L  +EE++K
Sbjct: 199 AGPHLMSTKGVKAFKLTASS-MAYWRGDSNKARLHRIYGTAYNKKEDLKAHLERMEEAKK 257

Query: 244 RDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMR--RKIKDDYEEINTPQVL 300
           RDH KL REM+LF      G G+     KG K+   L  ++      +  Y    TP + 
Sbjct: 258 RDHNKLGREMELFTTVDVIGQGLPLMMPKGTKMIMKLQRWIEDLEDKEWGYVRTKTPLMA 317

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
              L++ SGHWD Y   MF +    +   +    AL+PM CP    V+     SYR+LP 
Sbjct: 318 KSDLYKISGHWDHYLDGMFVLGDP-EKDGEEEVMALRPMTCPFQYYVYKAKQHSYRDLPY 376

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+ E  +++RNE SG +HGL RVR FT  + H     +Q   E     NL   + K  G 
Sbjct: 377 RMGETSTLFRNEDSGEMHGLTRVRQFTISEGHNVIRPDQCEEELKACFNLNRYVLKVLGL 436

Query: 421 EKIMVKL-----STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           E  +            EK +G D  W+  + +++ +L       ++ +      GE AFY
Sbjct: 437 ENDVTYRLSKWDPKNTEKYLGDDEYWNSTQEVLRNILI------EENVPFVEADGEAAFY 490

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +   K+  G++    TIQ+D  +   F+ +Y++ + +K  P +IHR   G  ER +
Sbjct: 491 GPKIDIQAKNVYGKEDTMVTIQLDCAIAENFDLYYIDQNGDKIRPYIIHRTSLGCYERTL 550

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
             +IE++ G  P WL P Q  V  I+    +YA+++A+ LK + + +  D R E I YKI
Sbjct: 551 AWLIEHYAGKFPTWLCPEQVRVLPISEKYADYAKKVADELKRNDVDVTVDNRAEKIGYKI 610

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           RE  + K+P +++ G  E ++ ++ +R           L D I  + KE    + +
Sbjct: 611 REARMDKLPYMLVVGADEEADGTVSVRSRFEGNEGVKPLSDFIDQICKEIRTKEIR 666


>gi|241955201|ref|XP_002420321.1| threonyl-tRNA synthetase, cytoplasmic, putative [Candida
           dubliniensis CD36]
 gi|223643663|emb|CAX41396.1| threonyl-tRNA synthetase, cytoplasmic, putative [Candida
           dubliniensis CD36]
          Length = 706

 Score =  589 bits (1518), Expect = e-166,   Method: Composition-based stats.
 Identities = 234/651 (35%), Positives = 359/651 (55%), Gaps = 25/651 (3%)

Query: 3   SDIKLTFPDGSIKNFPV-HATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIE 60
           + IK+T  DG++K       +  D+A SI +S A++ V   ++GK+ D+  P+  +  +E
Sbjct: 57  TPIKITLRDGTVKEGTAFETSPMDIANSIGKSFAERQVIAKVDGKLWDMPRPLEGDVKLE 116

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF---DKEQPFSSD 117
            +  E P   AV  HS AHI+ EA +  +    ++ GP  EDGF+YD    + E   +  
Sbjct: 117 FLDFEHPEGKAVFWHSSAHILGEACECHY-GCHLSHGPPTEDGFFYDMSINNGETFVTQG 175

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +   +E+   + I     F +  ++ E+  ++F   K   K  I + IP   + T+YR G
Sbjct: 176 DFGNLEQVATKAIKEKQKFERLEMTKEQLLKMFHYNKYKVKF-ISDKIPDGTSTTVYRCG 234

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
              DLC GPH+  +G++K F K++K + +Y+ GD++   L R+YG ++  ++ +T++L F
Sbjct: 235 PLIDLCVGPHIPHSGRIKAF-KVLKNSSSYFLGDASNDSLQRVYGISFPDKKLMTEHLKF 293

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINT 296
           L E+ +RDHRK+ RE +LF   E   G   W   G +I+ TL+  +R + +   YEE+ T
Sbjct: 294 LAEAAERDHRKIGREQELFIFNEMSPGSAMWLPHGARIYNTLVDTLRTEYRKRGYEEVIT 353

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +    LW+ SGHW +Y+ NMF+ +       +  TF LKPMNCPGH  +F    +SYR
Sbjct: 354 PNMYSTKLWETSGHWQNYKENMFSFEV------EKETFGLKPMNCPGHCILFKSRERSYR 407

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ELP R+A+FG ++RNE SG+L GL RVR F QDDAH+FCT +Q+  E   + + +  +Y 
Sbjct: 408 ELPWRVADFGVIHRNEFSGALSGLTRVRRFQQDDAHIFCTTDQIGTEIAGVFDFLKKMYG 467

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
            FGFE  M +LSTRPEK VG    W+ AE  ++  L+      +  +N     G+GAFYG
Sbjct: 468 IFGFEFKM-ELSTRPEKYVGDLETWNSAEKKLEQALNDFLGEGKWELN----PGDGAFYG 522

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK + ++ DA+ R +QC TIQ+DF LP RF   Y +       PVMIHRA+ GS+ER   
Sbjct: 523 PKIDIMISDALKRWFQCATIQLDFQLPQRFELEYKSDKGPNTRPVMIHRAILGSVERMTA 582

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH-LSIETDFRNETINYKI 595
           I+ E++KG  P WLSP Q ++  +     +YAQ++   L   +    + D    T+  KI
Sbjct: 583 ILTEHYKGKWPFWLSPRQVLIVPVGPKYYDYAQKLQKKLNDDYFFYCDVDVSGNTLPKKI 642

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK----VSLLDAIPILT 642
           R   + K   I I G+ E +  S+ +R       Q     V   D +  + 
Sbjct: 643 RTGQLYKYNFIFIVGEDEENSESVNVRNRDIPEEQGKNAMVKFDDVVKQMV 693


>gi|154482657|ref|ZP_02025105.1| hypothetical protein EUBVEN_00330 [Eubacterium ventriosum ATCC
           27560]
 gi|149736433|gb|EDM52319.1| hypothetical protein EUBVEN_00330 [Eubacterium ventriosum ATCC
           27560]
          Length = 667

 Score =  589 bits (1518), Expect = e-166,   Method: Composition-based stats.
 Identities = 231/659 (35%), Positives = 367/659 (55%), Gaps = 20/659 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
           + +K+T  DGS+K +    + +D+A  I+  L + A A  ++G+V DL   + ++ ++ I
Sbjct: 13  NTMKVTLKDGSVKEYSEPMSVNDIAFDIAGGLGRAACAGEVDGEVVDLRTTIDKDCTLNI 72

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +T +D    A  RH+ +H+MAEAV++++PE ++AIGP I+ GFYYDF+ E PFS ++L +
Sbjct: 73  LTFKDEAGKAAYRHTASHVMAEAVKNLFPEAKLAIGPSIDTGFYYDFEHE-PFSREDLDK 131

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE +M++II + +   +  L  E A +  E + E YKVE+++ +P    ++ Y QGE+ D
Sbjct: 132 IEAEMKKIIKKGARLERFTLPREDAIKYMEDRNEPYKVELIKDLPEGSTISFYSQGEFVD 191

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LC GPH+ +T  +K F K++  + AYWRGDS++  L RIY TA++++ EL +YL  LE++
Sbjct: 192 LCAGPHLMNTKSIKAF-KIISSSMAYWRGDSSKARLQRIYATAFDSKDELNKYLEELEDA 250

Query: 242 EKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEINTPQ 298
           + RDH KL REM+LF      G G+     KG ++ Q L  ++     +   Y    TP 
Sbjct: 251 KNRDHNKLGREMELFTTVDVIGQGLPLLMPKGQRMIQKLQRWIEDLEDNEWGYVRTKTPL 310

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L++ SGHWD Y+  MF +    D  KD   FAL+PM CP    V+    KSYR+L
Sbjct: 311 MAKSDLYKISGHWDHYKDGMFVL---GDEEKDKEVFALRPMTCPFQYYVYKASQKSYRDL 367

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P R  E  +++RNE SG +HGL RVR FT  + H+    +QM  E      L     +  
Sbjct: 368 PCRYGETSTLFRNEDSGEMHGLTRVRQFTISEGHLIVRPDQMVEEFKNCIALAQYCLQTL 427

Query: 419 GFEKIMVKL-----STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           G E+ +            EK +G   +W++ E  ++ VL+ +       I     +GE A
Sbjct: 428 GLEEDVTYHLSKWDPENREKYIGEPEVWNETEQDIRNVLNELN------IPFVEDIGEAA 481

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +   K+  G++    TIQ D  L  +F+ +Y++ + EK  P +IHR   G  ER
Sbjct: 482 FYGPKVDINAKNVYGKEDTMITIQWDALLAEQFDMYYIDENGEKKRPYIIHRTSIGCYER 541

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
            +  +IE + G  P WL P Q  V  I+   VEYA ++A  LK + + +  D R+E I Y
Sbjct: 542 TLAWLIEKYAGKFPTWLCPEQVRVLPISDKYVEYADKVAAELKKNGIDVTVDSRSEKIGY 601

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           KIRE  + K+P +++ G +E ++ ++ +R   +       L + I  + KE    + +K
Sbjct: 602 KIREARLDKLPYMLVVGQQEEADETVSVRSRFAGDEGVKPLDEFIEQICKEIRTKEIRK 660


>gi|14318437|ref|NP_116578.1| Ths1p [Saccharomyces cerevisiae S288c]
 gi|730881|sp|P04801|SYTC_YEAST RecName: Full=Threonyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|556869|emb|CAA86092.1| threonyl-tRNA synthetase [Saccharomyces cerevisiae]
 gi|285812573|tpg|DAA08472.1| TPA: Ths1p [Saccharomyces cerevisiae S288c]
          Length = 734

 Score =  589 bits (1518), Expect = e-166,   Method: Composition-based stats.
 Identities = 237/670 (35%), Positives = 356/670 (53%), Gaps = 44/670 (6%)

Query: 1   MPS-DIKLTFPDGSIKN-FPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR--- 55
           MP   +K+   DG++K       T  D+A+ IS+SLA +     +NG++ DL  P     
Sbjct: 70  MPRVPLKIVLKDGAVKEATSWETTPMDIAKGISKSLADRLCISKVNGQLWDLDRPFEGEA 129

Query: 56  --EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK--- 110
             E  +E++  E      V  HS AH++ E+ +       + +GP  +DGF+Y+      
Sbjct: 130 NEEIKLELLDFESDEGKKVFWHSSAHVLGESCECHL-GAHICLGPPTDDGFFYEMAVRDS 188

Query: 111 --------EQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL 162
                   E+  S  +   +E   + +I +   F +  +S E   ++       YK  ++
Sbjct: 189 MKDISESPERTVSQADFPGLEGVAKNVIKQKQKFERLVMSKEDLLKM--FHYSKYKTYLV 246

Query: 163 E-SIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIY 221
           +  +P     T+YR G+  DLC GPH+  TG++K F KL+K +  Y+ GD+    L R+Y
Sbjct: 247 QTKVPDGGATTVYRCGKLIDLCVGPHIPHTGRIKAF-KLLKNSSCYFLGDATNDSLQRVY 305

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLIS 281
           G ++  ++ +  +L FL E+  RDHRK+ +E +LF   E   G  FW   G +I+ TL+ 
Sbjct: 306 GISFPDKKLMDAHLKFLAEASMRDHRKIGKEQELFLFNEMSPGSCFWLPHGTRIYNTLVD 365

Query: 282 YMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
            +R + +   YEE+ TP + +  LW+ SGHW +Y+ NMF  +       +  TF LKPMN
Sbjct: 366 LLRTEYRKRGYEEVITPNMYNSKLWETSGHWANYKENMFTFEV------EKETFGLKPMN 419

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
           CPGH  +F    +SYRELP R+A+FG ++RNE SG+L GL RVR F QDDAH+FCT +Q+
Sbjct: 420 CPGHCLMFKSRERSYRELPWRVADFGVIHRNEFSGALSGLTRVRRFQQDDAHIFCTHDQI 479

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQ 460
            +E   I N +  IY  FGFE  M +LSTRPEK VG    WD AE+ ++  L       +
Sbjct: 480 ESEIENIFNFLQYIYGVFGFEFKM-ELSTRPEKYVGKIETWDAAESKLESALK------K 532

Query: 461 DRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH---SEK 517
              N  +  G+GAFYGPK + ++ DA+ R  QC TIQ+DF LP+RF   + +        
Sbjct: 533 WGGNWEINAGDGAFYGPKIDIMISDALRRWHQCATIQLDFQLPNRFELEFKSKDQDSESY 592

Query: 518 CHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKS 577
             PVMIHRA+ GS+ER   I+ E+F G  P WLSP Q +V  +      YA+++ N L  
Sbjct: 593 ERPVMIHRAILGSVERMTAILTEHFAGKWPFWLSPRQVLVVPVGVKYQGYAEDVRNKLHD 652

Query: 578 HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ----KVS 633
                + D    T+  K+R   + K   I I G++E +E+S+ IR       Q     VS
Sbjct: 653 AGFYADVDLTGNTLQKKVRNGQMLKYNFIFIVGEQEMNEKSVNIRNRDVMEQQGKNATVS 712

Query: 634 LLDAIPILTK 643
           + + +  L  
Sbjct: 713 VEEVLKQLRN 722


>gi|151943085|gb|EDN61420.1| threonyl-tRNA synthetase [Saccharomyces cerevisiae YJM789]
          Length = 734

 Score =  589 bits (1517), Expect = e-166,   Method: Composition-based stats.
 Identities = 237/670 (35%), Positives = 356/670 (53%), Gaps = 44/670 (6%)

Query: 1   MPS-DIKLTFPDGSIKN-FPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR--- 55
           MP   +K+   DG++K       T  D+A+ IS+SLA +     +NG++ DL  P     
Sbjct: 70  MPRVPLKIVLKDGAVKEATSWETTPMDIAKGISKSLADRLCISKVNGQLWDLDRPFEGEA 129

Query: 56  --EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK--- 110
             E  +E++  E      V  HS AH++ E+ +       + +GP  +DGF+Y+      
Sbjct: 130 NEEIKLELLDFESDEGKKVFWHSSAHVLGESCECHL-GAHICLGPPTDDGFFYEMAVRDS 188

Query: 111 --------EQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL 162
                   E+  S  +   +E   + +I +   F +  +S E   ++       YK  ++
Sbjct: 189 MKDISESPERTVSQADFPGLEGVAKNVIKQKQKFERLVMSKEDLLKM--FHYSKYKTYLV 246

Query: 163 E-SIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIY 221
           +  +P     T+YR G+  DLC GPH+  TG++K F KL+K +  Y+ GD+    L R+Y
Sbjct: 247 QTKVPDGGATTVYRCGKLIDLCVGPHIPHTGRIKAF-KLLKNSSCYFLGDATNDSLQRVY 305

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLIS 281
           G ++  ++ +  +L FL E+  RDHRK+ +E +LF   E   G  FW   G +I+ TL+ 
Sbjct: 306 GISFPDKKLMDAHLKFLAEASMRDHRKIGKEQELFLFNEMSPGSCFWLPHGTRIYNTLVD 365

Query: 282 YMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
            +R + +   YEE+ TP + +  LW+ SGHW +Y+ NMF  +       +  TF LKPMN
Sbjct: 366 LLRTEYRKRGYEEVITPNMYNSKLWETSGHWANYKENMFTFEV------EKETFGLKPMN 419

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
           CPGH  +F    +SYRELP R+A+FG ++RNE SG+L GL RVR F QDDAH+FCT +Q+
Sbjct: 420 CPGHCLMFKSRERSYRELPWRVADFGVIHRNEFSGALSGLTRVRRFQQDDAHIFCTHDQI 479

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQ 460
            +E   I N +  IY  FGFE  M +LSTRPEK VG    WD AE+ ++  L       +
Sbjct: 480 ESEIENIFNFLQYIYGVFGFEFKM-ELSTRPEKYVGKIETWDAAESKLESALK------K 532

Query: 461 DRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH---SEK 517
              N  +  G+GAFYGPK + ++ DA+ R  QC TIQ+DF LP+RF   + +        
Sbjct: 533 WGGNWEINAGDGAFYGPKIDIMISDALRRWHQCATIQLDFQLPNRFELEFKSKDQDSESY 592

Query: 518 CHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKS 577
             PVMIHRA+ GS+ER   I+ E+F G  P WLSP Q +V  +      YA+++ N L  
Sbjct: 593 ERPVMIHRAILGSVERMTAILTEHFAGKWPFWLSPRQVLVVPVGVKYQGYAEDVRNKLHD 652

Query: 578 HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ----KVS 633
                + D    T+  K+R   + K   I I G++E +E+S+ IR       Q     VS
Sbjct: 653 AGFYADVDLTGNTLQKKVRNGQMLKYNFIFIVGEQEMNEKSVNIRNRDVMEQQGKNATVS 712

Query: 634 LLDAIPILTK 643
           + + +  L  
Sbjct: 713 VEEVLKQLRN 722


>gi|4619|emb|CAA26666.1| unnamed protein product [Saccharomyces cerevisiae]
          Length = 734

 Score =  589 bits (1517), Expect = e-166,   Method: Composition-based stats.
 Identities = 237/670 (35%), Positives = 356/670 (53%), Gaps = 44/670 (6%)

Query: 1   MPS-DIKLTFPDGSIKN-FPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR--- 55
           MP   +K+   DG++K       T  D+A+ IS+SLA +     +NG++ DL  P     
Sbjct: 70  MPRVPLKIVLKDGAVKEATSWETTPMDIAKGISKSLADRLCISKVNGQLWDLDRPFEGEA 129

Query: 56  --EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK--- 110
             E  +E++  E      V  HS AH++ E+ +       + +GP  +DGF+Y+      
Sbjct: 130 NEEIKLELLDFESDEGKKVFWHSSAHVLGESCECHL-GAHICLGPPTDDGFFYEMAVRDS 188

Query: 111 --------EQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL 162
                   E+  S  +   +E   + +I +   F +  +S E   ++       YK  ++
Sbjct: 189 MKDISESPERTVSQADFPGLEGVAKNVIKQKQKFERLVMSKEDLLKM--FHYSKYKTYLV 246

Query: 163 E-SIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIY 221
           +  +P     T+YR G+  DLC GPH+  TG++K F KL+K +  Y+ GD+    L R+Y
Sbjct: 247 QTKVPDGGATTVYRCGKLIDLCVGPHIPHTGRIKAF-KLLKNSSCYFLGDATNDSLQRVY 305

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLIS 281
           G ++  ++ +  +L FL E+  RDHRK+ +E +LF   E   G  FW   G +I+ TL+ 
Sbjct: 306 GISFPDKKLMDAHLKFLAEASMRDHRKIGKEQELFLFNEMSPGSCFWLPHGTRIYNTLVD 365

Query: 282 YMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
            +R + +   YEE+ TP + +  LW+ SGHW +Y+ NMF  +       +  TF LKPMN
Sbjct: 366 LLRTEYRKRGYEEVITPNMYNSKLWETSGHWANYKENMFTFEV------EKETFGLKPMN 419

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
           CPGH  +F    +SYRELP R+A+FG ++RNE SG+L GL RVR F QDDAH+FCT +Q+
Sbjct: 420 CPGHCLMFKSRERSYRELPWRVADFGVIHRNEFSGALSGLTRVRRFQQDDAHIFCTHDQI 479

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQ 460
            +E   I N +  IY  FGFE  M +LSTRPEK VG    WD AE+ ++  L       +
Sbjct: 480 ESEIENIFNFLQYIYGVFGFEFEM-ELSTRPEKYVGKIETWDAAESKLESALK------K 532

Query: 461 DRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH---SEK 517
              N  +  G+GAFYGPK + ++ DA+ R  QC TIQ+DF LP+RF   + +        
Sbjct: 533 WGGNWEINAGDGAFYGPKIDIMISDALRRWHQCATIQLDFQLPNRFELEFKSKDQDSESY 592

Query: 518 CHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKS 577
             PVMIHRA+ GS+ER   I+ E+F G  P WLSP Q +V  +      YA+++ N L  
Sbjct: 593 ERPVMIHRAILGSVERMTAILTEHFAGKWPFWLSPRQVLVVPVGVKYQGYAEDVRNKLHD 652

Query: 578 HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ----KVS 633
                + D    T+  K+R   + K   I I G++E +E+S+ IR       Q     VS
Sbjct: 653 AGFYADVDLTGNTLQKKVRNGQMLKYNFIFIVGEQEMNEKSVNIRNRDVMEQQGKNATVS 712

Query: 634 LLDAIPILTK 643
           + + +  L  
Sbjct: 713 VEEVLKQLRN 722


>gi|197301753|ref|ZP_03166823.1| hypothetical protein RUMLAC_00479 [Ruminococcus lactaris ATCC
           29176]
 gi|197299193|gb|EDY33723.1| hypothetical protein RUMLAC_00479 [Ruminococcus lactaris ATCC
           29176]
          Length = 655

 Score =  589 bits (1517), Expect = e-166,   Method: Composition-based stats.
 Identities = 229/657 (34%), Positives = 363/657 (55%), Gaps = 20/657 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K+T  DGS+K +    +  D+A  IS  LA+ A A  +NG++ DL   +  +  + I+T
Sbjct: 1   MKITLKDGSVKEYSEAKSVYDIAADISSGLARVACAGEVNGEIVDLRTVIDSDCELNIVT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
             DP  L VIRH+ +H++A+AV+ ++P+ ++AIGP IEDGFYYDF+ E PFS + L ++E
Sbjct: 61  ASDPEGLKVIRHTASHVLAQAVKRLFPDAKIAIGPAIEDGFYYDFEAE-PFSRETLDKLE 119

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M++II       +  L  E+A +  + K E +KVE++E +P  E ++ Y QGE+ DLC
Sbjct: 120 AEMKKIIKEGHELKRYTLPREEAIKFMQEKNEPFKVELIEDLPEGEEISFYDQGEFVDLC 179

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+ +T  +K F KL   + AYWRGDS++  L RIYGTA+N ++EL  YL  LE++++
Sbjct: 180 AGPHLMTTKGIKAF-KLTSSSMAYWRGDSDKARLQRIYGTAFNKKEELNAYLEKLEDAKR 238

Query: 244 RDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMR--RKIKDDYEEINTPQVL 300
           RDH KL REM+LF      G G+  +  KG K+   L  ++      +  Y    TP + 
Sbjct: 239 RDHNKLGREMELFTTVDVIGQGLPLFPPKGTKMIMKLQRWIEDLEDKEWGYVRTRTPLMA 298

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
              L++ SGHWD Y+  MF +    D  KD   FAL+PM CP    V+ +  KSYR+LP 
Sbjct: 299 KSDLYKISGHWDHYKEGMFVL---GDEEKDKEVFALRPMTCPFQYYVYKNTQKSYRDLPY 355

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R++E  +++R+E SG +HGL RVR FT  +AH     +Q   E     +L   +    G 
Sbjct: 356 RMSETSTLFRSEDSGEMHGLTRVRQFTITEAHNVIRPDQAEEELKNCFDLAYYVLSTLGL 415

Query: 421 EKIMVKL-----STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           +  +            +K +G +  W+  +  ++ VL       +  +      GE AFY
Sbjct: 416 QDDVTYRLSKWDPANKKKYLGDEDYWNRTQEALREVL------REKGVPFVEADGEAAFY 469

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +   K+  G++    TIQ+D  +   F+ +Y++ + +K  P +IHR   G  ER +
Sbjct: 470 GPKIDIQAKNVYGKEDTMITIQLDCAIAENFDLYYIDQNGDKVRPYIIHRTSMGCYERTL 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
             +IE + G  P WL P Q  V  I+    EYA ++   LK + + +  D R+E I +KI
Sbjct: 530 AWLIEKYAGKFPTWLCPEQVRVLPISEKYEEYANKVCAELKKNDIDVTVDNRSEKIGFKI 589

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           RE  + K+P +++ G +E ++ ++ +R   +      SL + I  + KE    + +K
Sbjct: 590 REARLDKLPYMLVVGQQEEADGTVSVRSRFAGNEGTKSLDEFIDAICKEIRTKEIRK 646


>gi|315038857|ref|YP_004032425.1| threonyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
 gi|312276990|gb|ADQ59630.1| threonyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
          Length = 645

 Score =  589 bits (1517), Expect = e-166,   Method: Composition-based stats.
 Identities = 224/644 (34%), Positives = 350/644 (54%), Gaps = 22/644 (3%)

Query: 6   KLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITP 64
            +T PDGS K F    +  DVA SI+ SL K AV   +NG+V  L   +  +  I I+T 
Sbjct: 4   SVTLPDGSKKEFDKAVSVKDVASSIATSLGKAAVGAKVNGQVKPLDYEIDSDVEIAILTD 63

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           +D   L ++R + A  +    +  +PE+++      E GFY D DK+      EL ++EK
Sbjct: 64  KDEEGLDILRATAAFALEAVAKKKYPELRIGEHVADEGGFYVDTDKKDQIKVTELPELEK 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
            M++++          +   +  ++++   + YK E+L+ +   + V  Y+ G++ D   
Sbjct: 124 AMEKLVKSGQAIEHVEMDKSELEDIYK--DDPYKSELLKKV-EGDKVDAYKLGDFVDFGF 180

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
              + +TG++K F KL+ VAGAYW G S+ PML RI+GTA+  +  L   L    E ++ 
Sbjct: 181 DALLPNTGKIKHF-KLLSVAGAYWLGKSSNPMLQRIFGTAFFKEAALKDDLKRRAEIKEC 239

Query: 245 DHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQ 302
           DHR + R++DLF +      G+ +W  KG  I + +  Y+  R++ D Y+ + TP +++ 
Sbjct: 240 DHRTIGRDLDLFFVDPKVGAGLPYWMPKGATIRRVVERYIIDREVADGYQHVYTPVLMNL 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             ++ SGHW  YR +MF          D     L+PMNCP H+ ++ H ++SYR+LP+R+
Sbjct: 300 DAYKTSGHWAHYRDDMFPPMDMG----DGEMLELRPMNCPSHIQIYKHHIRSYRDLPLRV 355

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  KI  LI+ +YKDF    
Sbjct: 356 AELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQVQDEFAKILKLIMDVYKDFDITD 415

Query: 423 IMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
              +LS R  K       +D +W+ ++ ++KG +D +       ++     GE AFYGPK
Sbjct: 416 YYFRLSYRDPKNTEKYFANDEMWERSQKMLKGAMDDLG------LDYVEAEGEAAFYGPK 469

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +   K A+G D    TIQ+DF LP RF   YV    E+  PVMIHR + G++ERFI  +
Sbjct: 470 LDIQTKTALGNDETMSTIQLDFMLPERFGLTYVGQDGEEHRPVMIHRGIVGTMERFIAYL 529

Query: 539 IENFKGNLPLWLSPIQAIVTTI-TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
            E +KG  P WL+PIQA +  +   +  EYA+++   L       E D RNE + YKIRE
Sbjct: 530 TEIYKGAFPTWLAPIQAEIIPVNNDAHGEYAEKVRQELAKRGFRAEVDNRNEKMGYKIRE 589

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
              +K+P  ++ GD+E    S+ +RR+G+      SL D I  +
Sbjct: 590 SQTQKVPYTLVLGDEEMKNGSVNVRRYGTDEEISKSLDDFIKEI 633


>gi|269126329|ref|YP_003299699.1| threonyl-tRNA synthetase [Thermomonospora curvata DSM 43183]
 gi|268311287|gb|ACY97661.1| threonyl-tRNA synthetase [Thermomonospora curvata DSM 43183]
          Length = 684

 Score =  588 bits (1516), Expect = e-166,   Method: Composition-based stats.
 Identities = 245/663 (36%), Positives = 372/663 (56%), Gaps = 41/663 (6%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEI 61
           S +++T  DG  +      T     E+      K  +A  +NG++ DL   VR+G  +E 
Sbjct: 33  SKLRITL-DGDERMVAAGTTAGQALEA----DGKTVIAARVNGELRDLDYEVRDGDEVEP 87

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +  +     A++RHS AH+MA+AVQ ++PE ++ IGP +E+GFYYDFD  +PF+ ++L +
Sbjct: 88  VAIDTEDGRAILRHSTAHVMAQAVQELFPEAKLGIGPPVENGFYYDFDVARPFTPEDLKR 147

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK------------E 169
           IEK+M+EII +   F ++ +S E+AR   E   E YK+E+++                  
Sbjct: 148 IEKRMREIIKQGQRFSRRPVSDEQARA--ELADEPYKLELIDLKGGASADDGSSVEVGAG 205

Query: 170 NVTLYRQGE-------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYG 222
            +T+Y   +       W DLCRGPH+ +T  +  F KLM+  GAYWRG    P L RIYG
Sbjct: 206 QLTIYDNLDAKTGEVCWKDLCRGPHLPTTRHIPAF-KLMRSGGAYWRGSEKNPQLQRIYG 264

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLIS 281
           TAW +++    YL  LEE+EKRDHRKL  E+DLF      G G+  WH KG  + + +  
Sbjct: 265 TAWESRERQDAYLKMLEEAEKRDHRKLGVELDLFSFPSAIGGGLAVWHPKGGIVRKVMED 324

Query: 282 YMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
           Y R R ++  YE + TP +    L++ SGH D Y   M+          D  T+  KPMN
Sbjct: 325 YSRKRHLEAGYEFVVTPHLSKSTLFETSGHLDWYAEGMYPPMEL-----DGATYYPKPMN 379

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
           CP H+ +F    +SYRELP+R+ E G+VYR E SG LHGL R RGFTQDDAH+F   +Q+
Sbjct: 380 CPMHIMIFKARGRSYRELPLRMFELGTVYRYEKSGVLHGLTRARGFTQDDAHIFVAPDQL 439

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQ 460
             E   +   ++ + +D+G  +   +L+TRPEK VG  A W+ A+  ++  L        
Sbjct: 440 AEELASLLKFVVGLLRDYGLTEFEAELATRPEKYVGEIADWEKAQAALEHALQEAG---- 495

Query: 461 DRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHP 520
             +   +  GEGAFY PK +  ++DAIGR WQ  T+QVD  LP RF+  +  +   +  P
Sbjct: 496 --LPYVIAEGEGAFYAPKIDVHIRDAIGRRWQLSTLQVDLQLPQRFDLEFQAADGTRQRP 553

Query: 521 VMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHL 580
            MIHRA+FGS+ERF  I++E++ G LP WL+P+Q +   I +S V + +++   L++  +
Sbjct: 554 YMIHRALFGSVERFFAILLEHYAGALPPWLAPVQVVGIPIGASHVPHLEKVVAQLRARGI 613

Query: 581 SIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
             E D  ++ +  KIR     KIP +++ GD + S+ ++  R         V + +A+  
Sbjct: 614 RAEVDASDDRMQKKIRNAQKAKIPYMLLAGDDDVSKDAVSFRYRSGEQKNGVPIPEAVEE 673

Query: 641 LTK 643
           + +
Sbjct: 674 IVR 676


>gi|256273733|gb|EEU08659.1| Ths1p [Saccharomyces cerevisiae JAY291]
          Length = 734

 Score =  588 bits (1516), Expect = e-166,   Method: Composition-based stats.
 Identities = 238/670 (35%), Positives = 356/670 (53%), Gaps = 44/670 (6%)

Query: 1   MPS-DIKLTFPDGSIKN-FPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR--- 55
           MP   +K+   DG++K       T  D+A+ IS+SLA +     ING++ DL  P     
Sbjct: 70  MPRVPLKIVLKDGAVKEATSWETTPMDIAKGISKSLADRLCISKINGQLWDLDRPFEGEA 129

Query: 56  --EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK--- 110
             E  +E++  E      V  HS AH++ E+ +       + +GP  +DGF+Y+      
Sbjct: 130 NEEIKLELLDFESDEGKKVFWHSSAHVLGESCECHL-GAHICLGPPTDDGFFYEMAVRDS 188

Query: 111 --------EQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL 162
                   E+  S  +   +E   + +I +   F +  +S E   ++       YK  ++
Sbjct: 189 MKDISESPERTVSQADFPGLEGVAKNVIKQKQKFERLVMSKEDLLKM--FHYSKYKTYLV 246

Query: 163 E-SIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIY 221
           +  +P     T+YR G+  DLC GPH+  TG++K F KL+K +  Y+ GD+    L R+Y
Sbjct: 247 QTKVPDGGATTVYRCGKLIDLCVGPHIPHTGRIKAF-KLLKNSSCYFLGDATNDSLQRVY 305

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLIS 281
           G ++  ++ +  +L FL E+  RDHRK+ +E +LF   E   G  FW   G +I+ TL+ 
Sbjct: 306 GISFPDKKLMDAHLKFLAEASMRDHRKIGKEQELFLFNEMSPGSCFWLPHGTRIYNTLVD 365

Query: 282 YMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
            +R + +   YEE+ TP + +  LW+ SGHW +Y+ NMF  +       +  TF LKPMN
Sbjct: 366 LLRTEYRKRGYEEVITPNMYNSKLWETSGHWANYKENMFTFEV------EKETFGLKPMN 419

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
           CPGH  +F    +SYRELP R+A+FG ++RNE SG+L GL RVR F QDDAH+FCT +Q+
Sbjct: 420 CPGHCLMFKSRERSYRELPWRVADFGVIHRNEFSGALSGLTRVRRFQQDDAHIFCTHDQI 479

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQ 460
            +E   I N +  IY  FGFE  M +LSTRPEK VG    WD AE+ ++  L       +
Sbjct: 480 ESEIENIFNFLQYIYGVFGFEFKM-ELSTRPEKYVGKIETWDAAESKLESALK------K 532

Query: 461 DRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH---SEK 517
              N  +  G+GAFYGPK + ++ DA+ R  QC TIQ+DF LP+RF   + +        
Sbjct: 533 WGGNWEINAGDGAFYGPKIDIMISDALRRWHQCATIQLDFQLPNRFELEFKSKDQDSESY 592

Query: 518 CHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKS 577
             PVMIHRA+ GS+ER   I+ E+F G  P WLSP Q +V  +      YA+++ N L  
Sbjct: 593 ERPVMIHRAILGSVERMTAILTEHFAGKWPFWLSPRQVLVVPVGVKYQGYAEDVRNKLHD 652

Query: 578 HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ----KVS 633
                + D    T+  K+R   + K   I I G++E +E+S+ IR       Q     VS
Sbjct: 653 AGFYADVDLTGNTLQKKVRNGQMLKYNFIFIVGEQEMNEKSVNIRNRDVMEQQGKNATVS 712

Query: 634 LLDAIPILTK 643
           + + +  L  
Sbjct: 713 VEEVLKQLRN 722


>gi|325957298|ref|YP_004292710.1| threonyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
 gi|325333863|gb|ADZ07771.1| threonyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
 gi|327184028|gb|AEA32475.1| threonyl-tRNA synthetase [Lactobacillus amylovorus GRL 1118]
          Length = 644

 Score =  588 bits (1516), Expect = e-166,   Method: Composition-based stats.
 Identities = 225/644 (34%), Positives = 351/644 (54%), Gaps = 22/644 (3%)

Query: 6   KLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITP 64
            +T PDGS K F    +  DVA SI+ SL K AV   +NG+V  L   +  +  I I+T 
Sbjct: 4   SVTLPDGSKKEFDKAVSVKDVASSIATSLGKAAVGAKVNGQVKPLDYEIDSDVEIAILTD 63

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           +D   L ++R + A  +    +  +PE+++      E GFY D DK+      EL ++EK
Sbjct: 64  KDEEGLDILRATAAFALEAVAKKKYPELRLGEHVADEGGFYVDTDKKDQIKVTELPELEK 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
            M++++          +   +  ++++   + YK E+L+ +   + V  Y+ G++ D   
Sbjct: 124 AMEKLVKSGQAIEHVEMDKSELEDIYK--DDPYKSELLKKV-EGDKVDAYKLGDFVDFGF 180

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
              + +TG++K F KL+ VAGAYW G S+ PML RI+GTA+  +  L   L    E ++R
Sbjct: 181 DALLPNTGKIKHF-KLLSVAGAYWLGKSSNPMLQRIFGTAFFKEAALKDDLKRRAEIKER 239

Query: 245 DHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQ 302
           DHR + R++DLF +      G+ +W  KG  I + +  Y+  R++ D Y+ + TP +++ 
Sbjct: 240 DHRTIGRDLDLFFVDPKVGAGLPYWMPKGATIRRVVERYIIDREVADGYQHVYTPVLMNL 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             ++ SGHW  YR +MF          D     L+PMNCP H+ ++ H ++SYR+LP+R+
Sbjct: 300 DAYKTSGHWAHYRDDMFPPMDMG----DGEMLELRPMNCPSHIQIYKHHIRSYRDLPLRV 355

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  KI  LI+ +YKDF    
Sbjct: 356 AELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQVQDEFAKILKLIMDVYKDFDITD 415

Query: 423 IMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
              +LS R  K       +D +W+ ++ ++KG +D +       ++     GE AFYGPK
Sbjct: 416 YYFRLSYRDPKNTEKYFANDEMWERSQKMLKGAMDDLG------LDYVEAEGEAAFYGPK 469

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +   K A+G D    TIQ+DF LP RF   YV    E+  PVMIHR + G++ERFI  +
Sbjct: 470 LDIQTKTALGNDETMSTIQLDFMLPERFGLTYVGQDGEEHRPVMIHRGIVGTMERFIAYL 529

Query: 539 IENFKGNLPLWLSPIQAIVTTI-TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
            E +KG  P WL+PIQA +  +   +  EYA+++   L       E D RNE + YKIRE
Sbjct: 530 TEIYKGAFPTWLAPIQAEIIPVNNDAHGEYAEKVRQELAKRGFRAEVDNRNEKMGYKIRE 589

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
              +K+P  ++ GD+E    S+ +RR+G+      SL D I  +
Sbjct: 590 SQTQKVPYTLVLGDEEMKNGSVNVRRYGTDEEISKSLDDFIKEI 633


>gi|291525280|emb|CBK90867.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Eubacterium
           rectale DSM 17629]
 gi|291529262|emb|CBK94848.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Eubacterium
           rectale M104/1]
          Length = 657

 Score =  588 bits (1516), Expect = e-165,   Method: Composition-based stats.
 Identities = 225/656 (34%), Positives = 355/656 (54%), Gaps = 18/656 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K+T  DGS K +    +  ++A+ IS  LA+ A A  ++G++ DL   + ++ ++ IIT
Sbjct: 1   MKITLKDGSSKEYSEAKSVYEIAKDISEGLARAACAGEVDGEIVDLRTVLDKDCTLNIIT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
             D   L VIRH+ +H++A+AV++++P+ ++ IGP I+DGFYYDFD  QPFS ++L  +E
Sbjct: 61  ASDEEGLRVIRHTASHVLAQAVKNLFPDAKITIGPAIDDGFYYDFDS-QPFSREDLDALE 119

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M++II +     +  L  E+A +  + K E YKVE++E +P  E ++ Y QG + DLC
Sbjct: 120 AEMKKIIKQGHEITRFTLPREEAIKFMKEKDEPYKVELIEELPEGEEISFYDQGGFVDLC 179

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+ ST  VK F        AYWRGDSN+  L RIYGTA+N +++L  +L  +EE++K
Sbjct: 180 AGPHLMSTKGVKAFKLTASS-MAYWRGDSNKARLHRIYGTAYNKKEDLKAHLERMEEAKK 238

Query: 244 RDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMR--RKIKDDYEEINTPQVL 300
           RDH KL REM+LF      G G+     KG K+   L  ++      +  Y    TP + 
Sbjct: 239 RDHNKLGREMELFTTVDVIGQGLPLMMPKGTKMIMKLQRWIEDLEDKEWGYVRTKTPLMA 298

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
              L++ SGHWD Y   MF +    +   +    AL+PM CP    V+     SYR+LP 
Sbjct: 299 KSDLYKISGHWDHYLDGMFVLGDP-EKDGEEEVMALRPMTCPFQYYVYKAKQHSYRDLPY 357

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+ E  +++RNE SG +HGL RVR FT  + H     +Q   E     NL   + K  G 
Sbjct: 358 RMGETSTLFRNEDSGEMHGLTRVRQFTISEGHNVIRPDQCEEELKACFNLNRYVLKVLGL 417

Query: 421 EKIMVKL-----STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           E  +            EK +G D  W+  + +++ +L       ++ +      GE AFY
Sbjct: 418 ENDVTYRLSKWDPKNTEKYLGDDEYWNSTQEVLRNILI------EENVPFVEADGEAAFY 471

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +   K+  G++    TIQ+D  +   F+ +Y++ + +K  P +IHR   G  ER +
Sbjct: 472 GPKIDIQAKNVYGKEDTMVTIQLDCAIAENFDLYYIDQNGDKIRPYIIHRTSLGCYERTL 531

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
             +IE++ G  P WL P Q  V  I+    +YA+++A+ LK + + +  D R E I YKI
Sbjct: 532 AWLIEHYAGKFPTWLCPEQVRVLPISEKYADYAKKVADELKRNDVDVTVDNRAEKIGYKI 591

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           RE  + K+P +++ G  E ++ ++ +R           L D I  + KE    + +
Sbjct: 592 REARMDKLPYMLVVGADEEADGTVSVRSRFEGNEGVKPLSDFIDQICKEIRTKEIR 647


>gi|297623866|ref|YP_003705300.1| threonyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
 gi|297165046|gb|ADI14757.1| threonyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
          Length = 665

 Score =  588 bits (1516), Expect = e-165,   Method: Composition-based stats.
 Identities = 240/654 (36%), Positives = 373/654 (57%), Gaps = 30/654 (4%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPE 65
           +T PDG     P  AT  DVA++I   LAK A+   + G++ DL   + +G+ + I+T +
Sbjct: 3   VTLPDGKRLELPAGATARDVAQAIGPGLAKAALGATVGGQLTDLLSELPDGAEVAILTKK 62

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIW-------PEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           D   + ++RH+ AH+MA+AV+ ++         +++ +GP+I++GFYYDFD  +  + D+
Sbjct: 63  DEAVVRLMRHTLAHVMAQAVRDLFVAEGYAPERIKMGVGPVIDNGFYYDFDLPRTLTPDD 122

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L +IE +M+EII    P  +  L   +A   FE + + YK+E+++++P    +T Y QG 
Sbjct: 123 LERIEARMREIIRAKLPLRRFALPRAEALARFEGR-DPYKLELIQNLPEDVPITFYEQGG 181

Query: 179 ---WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
              + DLCRGPHV +TG + + FKLM VAGAYWRGD  RPML R+YG A+ T++EL  +L
Sbjct: 182 ADGFTDLCRGPHVPNTGDLPQHFKLMSVAGAYWRGDETRPMLQRVYGVAFRTKEELEDHL 241

Query: 236 YFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEE 293
           + LEE++KRDHRKL  E+++F + +D G G+  W  +G  I + +    +  + +  Y++
Sbjct: 242 WRLEEAKKRDHRKLGAELEIFTLDDDIGPGLPLWLPRGAVIVEEIEKLAKEMERRAGYQQ 301

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           + TP V  + L+ +SGH   Y  +MF     D+       + LKPMNCP H  +F    +
Sbjct: 302 VRTPHVTKEQLFTRSGHLPYYAESMFPPMELDNV-----RYYLKPMNCPFHHKIFAARPR 356

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYRELP+RLAE+G+ YR E  G+L GLMRVR    +DAH++CT EQ  +E + +  L + 
Sbjct: 357 SYRELPLRLAEYGTCYRYEDHGALMGLMRVRSMQMNDAHIYCTPEQFEDEFMGVIALYLE 416

Query: 414 IYKDFGFEKIMVKLSTRPE-----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
            ++ FG    +++LS         K V +  LW+  E +++G L+      +  IN   +
Sbjct: 417 YFRLFGIRDYVMRLSKHSRAGLGKKYVNNPELWEQTEAMVRGALE------RGGINFIEV 470

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
             E AFYGPK +  +   IGR++   T QVDF +P+RF   YV     +  P+ +HRA  
Sbjct: 471 EDEAAFYGPKIDVQIYSVIGREFTLATNQVDFAVPARFGLEYVAEDGSRKTPLCLHRAPL 530

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRN 588
            + ER +G ++E+F G+ PLWL+P Q  V  I      YAQ +   L    L  E D R 
Sbjct: 531 STHERLVGFLLEHFAGDFPLWLAPEQVRVVPIADRHNAYAQSLKARLAEAGLRAEADLRG 590

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           E +N K+R+  + K+P  +I GDKE    ++  R       + VS+   +  L 
Sbjct: 591 ERMNAKVRDAELLKVPYTVIVGDKEVEAGALSFRSRKEPEQKGVSVEAFVAHLQ 644


>gi|303325499|ref|ZP_07355942.1| threonine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
 gi|302863415|gb|EFL86346.1| threonine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
          Length = 648

 Score =  588 bits (1515), Expect = e-165,   Method: Composition-based stats.
 Identities = 271/649 (41%), Positives = 391/649 (60%), Gaps = 30/649 (4%)

Query: 12  GSIKNFPVHATGSDVAESISRSLAKK------AVAVAING--KVCDLSDPVREGSIEI-- 61
           G + + P  A   +VA ++ ++L+ K      A    ++G  ++ DLS P+ EG  E+  
Sbjct: 7   GQMVDVPAGA---EVAAALQKALSGKKFKAVVAAGAVVDGRSELLDLSAPLPEGCGELTP 63

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +  + P  L +IRHS AH+MA AV+ ++P  +V IGP I++GFYYDFD E+PFSS++   
Sbjct: 64  VYADSPEGLQLIRHSTAHVMAAAVKRLFPTARVTIGPSIDNGFYYDFDVERPFSSEDFPA 123

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE +MQ+I A   PF ++ LS   A   F++  E YKVE++E I A   V+LY  G++ D
Sbjct: 124 IEAEMQKIAAAREPFSREALSKADAVARFKAMGETYKVELIEGIEAD-TVSLYTCGDFTD 182

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV  TG  K   KLM VAGAYWRGD   PMLSRIYGTA+  ++ L  YL  LEE+
Sbjct: 183 LCRGPHVPHTGFAK-ASKLMSVAGAYWRGDEKNPMLSRIYGTAFADEKALAAYLKQLEEA 241

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQV 299
           ++RDHRKL RE+ LF   ED   G++FW  KG  +   L  + R   +K  Y+ +  PQ+
Sbjct: 242 KRRDHRKLGRELSLFAFQEDVAPGMVFWLPKGMLVRAILEDFWRKEHLKRGYDMVQGPQL 301

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           L    WQ+SGH+D YR NM+  +  DD       + +KPMNC  H+ ++ + L+SYR+LP
Sbjct: 302 LRVETWQRSGHYDHYRENMYFTRIEDDA------YGIKPMNCIAHMLIYKNELRSYRDLP 355

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
            R  E G V+R+E SG LHGL+RVR FTQDDAH+ C  EQ+  E L + +LI  +   FG
Sbjct: 356 QRYFELGVVHRHEKSGVLHGLLRVRQFTQDDAHILCAPEQLEGEILGVIHLIRDLMHLFG 415

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F+  +  +STRPE  +G+D  W+ A N +   ++         +   +  G+GAFYGPK 
Sbjct: 416 FQYKVA-VSTRPESSIGTDEAWELATNALIQAVEKAG------LPYEINAGDGAFYGPKI 468

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +  L D IGR+WQC TIQVDF LP RF+  YV    E+  PVM+HRA+ GS+ERFIG++I
Sbjct: 469 DVRLLDCIGREWQCSTIQVDFTLPERFDLTYVGQDGERHRPVMVHRAIMGSLERFIGVLI 528

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E + G LP WL+P QA + T+T +     + +   L++  + +  D RNE + +K+RE  
Sbjct: 529 EQYAGALPAWLAPEQARLLTVTEAGDATVERMRGELQALGIRVTADTRNEKLGFKVREAQ 588

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
           + K+P I++ G+KE     + +R          S+ D   ++  ++  P
Sbjct: 589 VAKVPYILVVGEKEVQADGVNVRLRSGENLGLKSIADVAALIRADAEEP 637


>gi|315651290|ref|ZP_07904318.1| threonine--tRNA ligase [Eubacterium saburreum DSM 3986]
 gi|315486442|gb|EFU76796.1| threonine--tRNA ligase [Eubacterium saburreum DSM 3986]
          Length = 651

 Score =  588 bits (1515), Expect = e-165,   Method: Composition-based stats.
 Identities = 230/657 (35%), Positives = 360/657 (54%), Gaps = 20/657 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           +K+T  DGS+K +    +  D+A  IS  LA+  VA  +NG +CDL D +  +  + +I 
Sbjct: 1   MKITLKDGSVKEYESKRSIIDIARDISEGLARSVVAGEVNGVICDLRDEIESDCELNLIA 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D + L+VIRH+ +H++A+AV+ I+P+ ++AIGP I +GFYYDF+ E PFS D+L ++E
Sbjct: 61  LKDEKGLSVIRHTASHVLAQAVKRIFPQAKLAIGPSIAEGFYYDFEHE-PFSRDDLDKLE 119

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M++II       +  L  E+A +  E K E YKVE++  +P  E ++ Y+QG++ DLC
Sbjct: 120 AEMKKIIKEGEAIERFELPREEAIKFMEEKNEPYKVELIRDLPQDEKISFYKQGDFTDLC 179

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH++ T  +K F KL+  + AYWRGDSN+  L RIYGTA+NT++EL  YL  LE+ + 
Sbjct: 180 AGPHLQRTKDIKAF-KLVSSSMAYWRGDSNKARLQRIYGTAYNTKEELEAYLKHLEDIKL 238

Query: 244 RDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEINTPQVL 300
           RDH KL REM+LF      G G+     KG K+ Q L  ++     +   Y    TP + 
Sbjct: 239 RDHNKLGREMELFTTVDVVGQGLPLMLPKGTKMIQKLQRWIEDLEDNEWGYVRTKTPLMA 298

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
              L++ SGHWD Y+  MF +    D   D    AL+PM CP    V+ +  KSYR+LP 
Sbjct: 299 KSDLYKISGHWDHYQDGMFIL---GDPQHDGEILALRPMTCPFQYYVYKNTQKSYRDLPY 355

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+ E  +++RNE SG +HGL RVR FT  + H     +Q   E     NL I + +  G 
Sbjct: 356 RMGETSTLFRNEDSGEMHGLTRVRQFTISEGHNVIRPDQAEEELQNCLNLAIYVLETLGL 415

Query: 421 EKIMVKL-----STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
              +            EK +G +A W+  +  ++ +L       +  +      GE AFY
Sbjct: 416 RDDVTFRLSKWDKNNKEKYLGDEAYWEGTQAALRNIL------VEKGLPFTEADGEAAFY 469

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +   K+  G++    TIQ+D  +   F+ +Y++ +  K  P ++HR   G  ER +
Sbjct: 470 GPKIDIQAKNVYGKEDTMITIQLDAAIAENFDLYYIDQNGAKVRPYIVHRTSLGCYERTL 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
             +IE + G  P WL P Q  +  I+    +YA  +   LK + +    D R E I +KI
Sbjct: 530 AWLIEKYAGKFPTWLCPEQVRILPISDKYADYANSVLKELKKNGVDATVDTRTEKIGFKI 589

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           R+  + ++P +++ G+KE +E S+ +R   +       L D + ++ KE    + +K
Sbjct: 590 RDARLSRLPYMLVVGEKEEAEGSVSVRSRFAGDEGSKKLSDFVDMICKEIRTKEIRK 646


>gi|251777990|ref|ZP_04820910.1| threonine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
 gi|243082305|gb|EES48195.1| threonine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
          Length = 643

 Score =  588 bits (1515), Expect = e-165,   Method: Composition-based stats.
 Identities = 241/649 (37%), Positives = 366/649 (56%), Gaps = 20/649 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEII 62
            IK++  DGS+K F    +  ++A+SIS  LA+ A    +NGKVCDL + + E  S+ I 
Sbjct: 1   MIKVSLKDGSVKEFEAGLSVYEIAKSISEGLARNACCGVVNGKVCDLRNKINEDVSLSIC 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +       +RHS +H++A AV+ ++P+ ++AIGP I  GFYYDFDK+  FS+ +L ++
Sbjct: 61  TFDSQEGKDTVRHSISHVLAYAVKRLFPQTKLAIGPSITTGFYYDFDKDVAFSAQDLEKL 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M++II  +    K  L  ++A EL +   E YKVE++  +   E ++ Y+ GE+ DL
Sbjct: 121 EAEMKKIIKENPSIEKFELPRDEALELMK--DEPYKVELINDLGEDEIISFYKIGEFTDL 178

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPHV  T +  K  KL++ AGAYW+GD    ML+RIYGTA+  + EL +YL  +EE++
Sbjct: 179 CAGPHVM-TLKPIKAIKLIRSAGAYWKGDEKNKMLTRIYGTAFLKKSELDEYLEAVEEAK 237

Query: 243 KRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVL 300
           KRDH KL RE+ LF   E+   G+     KG KI QTL  ++   + +  Y    TP + 
Sbjct: 238 KRDHNKLGRELKLFTTDENVGQGLPLLMPKGAKIVQTLQRWIEDEEERRGYVLTKTPLMA 297

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
              L++ SGHWD Y+  MF +    D  KD   FAL+PM CP    ++N    SYR+LP+
Sbjct: 298 KSDLYKISGHWDHYKDGMFVL---GDEEKDEEVFALRPMTCPFQYTIYNAEQHSYRDLPI 354

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R  E  +++RNE SG +HGL+RVR FT  D H+  T EQ+  E   +  LI  I K  G 
Sbjct: 355 RYGETSTLFRNESSGEMHGLIRVRQFTLADGHLIVTPEQLEEEFKGVLELIKYIMKTLGI 414

Query: 421 EKIMVKL-----STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           ++ +            EK +     W+  ++ M+ +LD +K      I+      E AFY
Sbjct: 415 DEDISYRFSKWDPNNTEKYINDPDAWNKTQDTMRTILDHLK------IDYVEADDEAAFY 468

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +   K+  G++    T+Q+DF L  RF+  Y++ + EK  P +IHR+  G  ER +
Sbjct: 469 GPKLDLQFKNVHGKEDTIITLQIDFALAERFDMSYIDKNGEKKRPYIIHRSSIGCYERTL 528

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE + G  P WLSP+Q  V  I+    +YA+ +   L++  + IE D+R E I YKI
Sbjct: 529 AMLIEKYAGAFPTWLSPVQVKVLPISDKYNDYAESVVKSLRNKGVRIEADYRAEKIGYKI 588

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           RE  +++ P I++ G+KEA+   + +R   +     + L      L  E
Sbjct: 589 REARLERTPYILVVGEKEAANSEVSVRSRKNDDEGAMKLDIFTERLLNE 637


>gi|227877040|ref|ZP_03995129.1| theronyl-tRNA synthetase [Lactobacillus crispatus JV-V01]
 gi|256843644|ref|ZP_05549132.1| threonyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|256850110|ref|ZP_05555540.1| threonyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
 gi|293381761|ref|ZP_06627738.1| threonyl-tRNA synthetase [Lactobacillus crispatus 214-1]
 gi|227863358|gb|EEJ70788.1| theronyl-tRNA synthetase [Lactobacillus crispatus JV-V01]
 gi|256615064|gb|EEU20265.1| threonyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|256713082|gb|EEU28073.1| threonyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
 gi|290921681|gb|EFD98706.1| threonyl-tRNA synthetase [Lactobacillus crispatus 214-1]
          Length = 644

 Score =  588 bits (1515), Expect = e-165,   Method: Composition-based stats.
 Identities = 222/644 (34%), Positives = 350/644 (54%), Gaps = 22/644 (3%)

Query: 6   KLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITP 64
            +T PDGS K+F    +  +VA SI+ SL K AV   +NG V  L   +  +  + I+T 
Sbjct: 4   SITLPDGSKKDFDKAVSVKEVASSIATSLGKAAVGAKVNGVVKPLDYEIDNDVEVAILTD 63

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           +D   L ++R + A  +    ++ +PE+++      E GFY D DK+      EL ++EK
Sbjct: 64  KDEEGLDILRATAAFALEAVAKNKYPELRLGQHVADEGGFYVDTDKDDQIKVTELPELEK 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
            M++++          +   +  ++F+   + YK ++L+ I A   V  Y+ G++ D   
Sbjct: 124 AMEKLVKSGQAIEHVVMDKSELEDIFK--DDPYKTDLLKKIDAD-KVDAYKLGDFVDFGF 180

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
              + +TG++K F KL+ VAGAYW G S+ PML RI+GTA+  +  L + L    E ++R
Sbjct: 181 DALLPNTGKIKHF-KLLSVAGAYWLGKSSNPMLQRIFGTAFFKEAALKEDLKRRAEIKER 239

Query: 245 DHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQ 302
           DHR + R++D F +      G+ +W  KG  I + +  Y+  R++ D Y+ + TP +++ 
Sbjct: 240 DHRTIGRDLDFFFVDPKVGAGLPYWMPKGATIRRVVERYIIDREVADGYQHVYTPVLMNL 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             ++ SGHW  YR +MF          D     L+PMNCP H+ ++ H ++SYR+LP+R+
Sbjct: 300 DAYKTSGHWAHYRDDMFPPMDMG----DGEMLELRPMNCPSHIQIYKHHIRSYRDLPLRV 355

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AE G ++R E SG+L GL RVR  T +D H F   +Q+  E  KI  LI+ +YKDF    
Sbjct: 356 AELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQVQTEFAKILKLIMDVYKDFDITD 415

Query: 423 IMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
              +LS R  K       +D +W+ ++ ++KG +D +       ++     GE AFYGPK
Sbjct: 416 YYFRLSYRDPKNTDKYFANDEMWERSQKMLKGAMDDLG------LDYVEAEGEAAFYGPK 469

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +   K A+G D    TIQ+DF LP RF   YV    E+  PVMIHR + G++ERFI  +
Sbjct: 470 LDIQTKTALGNDETMSTIQLDFMLPERFGLTYVGQDGEEHRPVMIHRGIVGTMERFIAYL 529

Query: 539 IENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
            E +KG  P WL+P+Q  +  +   +  EYA+++   L       E D RNE + YKIRE
Sbjct: 530 TEIYKGAFPTWLAPVQVKIIPVNLDAHGEYAEKVRQELAKRGFRAEVDTRNEKMGYKIRE 589

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
              +K+P  ++ GD+E    S+ +RR+G+      SL D I  +
Sbjct: 590 SQTQKVPYTLVLGDEEMKNGSVNVRRYGTDEEISKSLTDFINEI 633


>gi|291545263|emb|CBL18372.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Ruminococcus sp.
           18P13]
          Length = 646

 Score =  588 bits (1515), Expect = e-165,   Method: Composition-based stats.
 Identities = 231/650 (35%), Positives = 351/650 (54%), Gaps = 19/650 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEII 62
            I+LT  DGSI+      + ++V + I   L K A  V ING+V DL   + E  S E++
Sbjct: 1   MIELTLKDGSIRQAEAGQSAAEVIKGIGMGLYKAACCVKINGEVKDLRTVLTENCSFEVM 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +         H+ +HI+A+AV+ ++PE ++AIGP I++GFYYDFD E+PF++DEL +I
Sbjct: 61  TFDSIEGKKAFWHTASHILAQAVKRLYPEAKLAIGPAIDNGFYYDFDVEKPFTADELVKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPA-KENVTLYRQGEWFD 181
           E +M++I+    P  +  L   +A +  E   E YKVE+        E ++ Y+QG++ D
Sbjct: 121 EAEMKQIVKEGIPLEQFELPPAEALKKLEEMGEPYKVELCSEHAGKGEPISFYKQGDFTD 180

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LC GPH+ +T  VK F KL+   GAYWRG     MLSRIYGTA+    EL  YL  LEE+
Sbjct: 181 LCAGPHLMTTAPVKAF-KLLSCTGAYWRGSEKNKMLSRIYGTAYPKAAELEAYLKQLEEA 239

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQV 299
           + RDH KL RE++LF   +  G G+     KG ++ Q L  ++   + +  Y    TP +
Sbjct: 240 KLRDHNKLGRELELFTTVDCIGQGLPIMLPKGARVIQLLQRFVEDEEQRRGYLLTKTPLM 299

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHWD Y+  MF +    D  KD   FAL+PM CP    VF +  +SYR+LP
Sbjct: 300 AKSDLYKISGHWDHYKEGMFVL---GDEEKDKEVFALRPMTCPFQYQVFLNRPRSYRDLP 356

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +RL E  +++RNE SG +HGL+RVR FT  + H+    EQ+ +E      L   +    G
Sbjct: 357 MRLGETSTLFRNEDSGEMHGLIRVRQFTISEGHLILRPEQLEDEFRGCLELANYMLTTLG 416

Query: 420 FEKIMVKL-----STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
               +            EK +G+   WD+A+  MK +LD +       I+  + + E AF
Sbjct: 417 LADDVTYRFSQWDPNNTEKYIGTPEQWDEAQGAMKKILDHLG------IHYTIGIDEAAF 470

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K+  G++    TIQ+D  L   F   Y +    K  P +IHR   G  ER 
Sbjct: 471 YGPKLDIQIKNVHGKEDTLITIQIDQMLAQLFGMEYTDVDGTKRRPYIIHRTSLGCYERT 530

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
           + ++IE + G  PLWL+P Q  +  I    ++Y  E+A  L++  + I  D R E + YK
Sbjct: 531 LALLIEKYAGAFPLWLAPEQVKLIPIADRHMDYTLELARKLEAAGMRITVDDRAEKVGYK 590

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IR+  ++K+P ++  GD E   +++ +R         ++    +  L +E
Sbjct: 591 IRQAVLEKVPYMLTIGDNEVESKTVSVRSRRDGDLGSMTQDALLAKLVEE 640


>gi|207344345|gb|EDZ71519.1| YIL078Wp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 689

 Score =  588 bits (1515), Expect = e-165,   Method: Composition-based stats.
 Identities = 237/670 (35%), Positives = 356/670 (53%), Gaps = 44/670 (6%)

Query: 1   MPS-DIKLTFPDGSIKN-FPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR--- 55
           MP   +K+   DG++K       T  D+A+ IS+SLA +     +NG++ DL  P     
Sbjct: 25  MPRVPLKIVLKDGAVKEATSWETTPMDIAKGISKSLADRLCISKVNGQLWDLDRPFEGEA 84

Query: 56  --EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK--- 110
             E  +E++  E      V  HS AH++ E+ +       + +GP  +DGF+Y+      
Sbjct: 85  NEEIKLELLDFESDEGKKVFWHSSAHVLGESCECHL-GAHICLGPPTDDGFFYEMAVRDS 143

Query: 111 --------EQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL 162
                   E+  S  +   +E   + +I +   F +  +S E   ++       YK  ++
Sbjct: 144 MKDISESPERTVSQADFPGLEGVAKNVIKQKQKFERLVMSKEDLLKM--FHYSKYKTYLV 201

Query: 163 E-SIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIY 221
           +  +P     T+YR G+  DLC GPH+  TG++K F KL+K +  Y+ GD+    L R+Y
Sbjct: 202 QTKVPDGGATTVYRCGKLIDLCVGPHIPHTGRIKAF-KLLKNSSCYFLGDATNDSLQRVY 260

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLIS 281
           G ++  ++ +  +L FL E+  RDHRK+ +E +LF   E   G  FW   G +I+ TL+ 
Sbjct: 261 GISFPDKKLMDAHLKFLAEASMRDHRKIGKEQELFLFNEMSPGSCFWLPHGTRIYNTLVD 320

Query: 282 YMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
            +R + +   YEE+ TP + +  LW+ SGHW +Y+ NMF  +       +  TF LKPMN
Sbjct: 321 LLRTEYRKRGYEEVITPNMYNSKLWETSGHWANYKENMFTFEV------EKETFGLKPMN 374

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
           CPGH  +F    +SYRELP R+A+FG ++RNE SG+L GL RVR F QDDAH+FCT +Q+
Sbjct: 375 CPGHCLMFKSRERSYRELPWRVADFGVIHRNEFSGALSGLTRVRRFQQDDAHIFCTHDQI 434

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQ 460
            +E   I N +  IY  FGFE  M +LSTRPEK VG    WD AE+ ++  L       +
Sbjct: 435 ESEIENIFNFLQYIYGVFGFEFKM-ELSTRPEKYVGKIETWDAAESKLESALK------K 487

Query: 461 DRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH---SEK 517
              N  +  G+GAFYGPK + ++ DA+ R  QC TIQ+DF LP+RF   + +        
Sbjct: 488 WGGNWEINAGDGAFYGPKIDIMISDALRRWHQCATIQLDFQLPNRFELEFKSKDQDSESY 547

Query: 518 CHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKS 577
             PVMIHRA+ GS+ER   I+ E+F G  P WLSP Q +V  +      YA+++ N L  
Sbjct: 548 ERPVMIHRAILGSVERMTAILTEHFAGKWPFWLSPRQVLVVPVGVKYQGYAEDVRNKLHD 607

Query: 578 HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ----KVS 633
                + D    T+  K+R   + K   I I G++E +E+S+ IR       Q     VS
Sbjct: 608 AGFYADVDLTGNTLQKKVRNGQMLKYNFIFIVGEQEMNEKSVNIRNRDVMEQQGKNATVS 667

Query: 634 LLDAIPILTK 643
           + + +  L  
Sbjct: 668 VEEVLKQLRN 677


>gi|262047409|ref|ZP_06020366.1| threonyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
 gi|260572383|gb|EEX28946.1| threonyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
          Length = 644

 Score =  588 bits (1515), Expect = e-165,   Method: Composition-based stats.
 Identities = 223/644 (34%), Positives = 352/644 (54%), Gaps = 22/644 (3%)

Query: 6   KLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITP 64
            +T PDGS K+F    +  +VA SI+ SL K AV   +NG V  L   +  +  + I+T 
Sbjct: 4   SITLPDGSKKDFDKAVSVKEVASSIATSLGKAAVGAKVNGVVKPLDYEIDNDVEVAILTD 63

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           +D   L ++R + A  +    ++ +PE+++      E GFY D DK+      EL ++EK
Sbjct: 64  KDEEGLDILRATAAFALEAVAKNKYPELRLGQHVADEGGFYVDTDKDDQIKVTELPELEK 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
            M++++          +   +  ++F+   + YK ++L+ I A   V  Y+ G++ D   
Sbjct: 124 AMEKLVKSGQAIEHVVMDKSELEDIFK--DDPYKTDLLKKIDAD-KVDAYKLGDFVDFGF 180

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
              + +TG++K F KL+ VAGAYW G S+ PML RI+GTA+  +  L + L    E ++R
Sbjct: 181 DALLPNTGKIKHF-KLLSVAGAYWLGKSSNPMLQRIFGTAFFKEAALKEDLKRRAEIKER 239

Query: 245 DHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQ 302
           DHR ++R++DLF +      G+ +W  KG  I + +  Y+  R++ D Y+ + TP +++ 
Sbjct: 240 DHRTISRDLDLFFVDPKVGAGLPYWMPKGATIRRVVERYIIDREVADGYQHVYTPVLMNL 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             ++ SGHW  YR +MF          D     L+PMNCP H+ ++ H ++SYR+LP+R+
Sbjct: 300 DAYKTSGHWAHYRDDMFPPMDMG----DGEMLELRPMNCPSHIQIYKHHIRSYRDLPLRV 355

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AE G ++R E SG+L GL RVR  T +D H F   +Q+  E  KI  LI+ +YKDF    
Sbjct: 356 AELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQVQTEFAKILKLIMDVYKDFDITD 415

Query: 423 IMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
              +LS R  K       +D +W+ ++ ++KG +D +       ++     GE AFYGPK
Sbjct: 416 YYFRLSYRDPKNTDKYFANDEMWERSQKMLKGAMDDLG------LDYVEAEGEAAFYGPK 469

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +   K A+G D    TIQ+DF LP RF   YV    E+  PVMIHR + G++ERFI  +
Sbjct: 470 LDIQTKTALGNDETMSTIQLDFMLPERFGLTYVGQDGEEHRPVMIHRGIVGTMERFIAYL 529

Query: 539 IENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
            E +KG  P WL+P+Q  +  +   +  EYA+++   L       E D RNE + YKIRE
Sbjct: 530 TEIYKGAFPTWLAPVQVEIIPVNLDAHGEYAEKVRQELAKRGFRAEVDTRNEKMGYKIRE 589

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
              +K+P  ++ GD+E    S+ +RR+G+      SL D I  +
Sbjct: 590 SQTQKVPYTLVLGDEEMKNGSVNVRRYGTDEEISKSLTDFINEI 633


>gi|225387532|ref|ZP_03757296.1| hypothetical protein CLOSTASPAR_01285 [Clostridium asparagiforme
           DSM 15981]
 gi|225046368|gb|EEG56614.1| hypothetical protein CLOSTASPAR_01285 [Clostridium asparagiforme
           DSM 15981]
          Length = 584

 Score =  588 bits (1515), Expect = e-165,   Method: Composition-based stats.
 Identities = 257/591 (43%), Positives = 381/591 (64%), Gaps = 19/591 (3%)

Query: 54  VREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQP 113
           + +GS++    E    L  IRH+ +H++A+AV+ ++PE ++AIGP I+DGFYYDFD+E  
Sbjct: 5   LPDGSVQ----EAEDELRAIRHTASHVLAQAVKRLYPETKLAIGPAIDDGFYYDFDREGG 60

Query: 114 FSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTL 173
           F+ ++L ++E +M +I+  + P     L  ++A +  E K E YKVE++E +P +E ++ 
Sbjct: 61  FTPEDLEKLEGEMMKIVKENLPVKPFVLPRDEAIKFMEEKGEPYKVELIEDLPDEETISF 120

Query: 174 YRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQ 233
           Y QGE+ DLC GPH+  T  VK F KL  +AGAYWRG     ML+RIYGTA+  + +L Q
Sbjct: 121 YTQGEFTDLCAGPHIMYTKGVKAF-KLTSIAGAYWRGSEKNKMLTRIYGTAFANKADLEQ 179

Query: 234 YLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYE 292
           YL  +EE++KRDHRKL +E+ LF  A++G G  F+  KG  +  TLI Y R   +++ Y+
Sbjct: 180 YLTMMEEAKKRDHRKLGKELGLFMFADEGPGFPFFLPKGMTLKNTLIDYWREIHLREGYQ 239

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E++TP +L + LW+ SGHWD Y+ NM+       T+ D   FA+KPMNCPG + V+ +  
Sbjct: 240 EVSTPIILSRKLWENSGHWDHYKDNMYT------TVIDEEDFAVKPMNCPGGMLVYKNTP 293

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
            SYRELP+R+ E G V+R+E SG LHGLMRVR FTQDDAH+F   +Q+ +E   +  LI 
Sbjct: 294 HSYRELPLRVGELGLVHRHEKSGQLHGLMRVRCFTQDDAHIFMRDDQIEDEIKGVTRLIN 353

Query: 413 SIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
            +Y  FGFE   V+LSTRPE  +GSD  W+ A N ++  L+ +       ++  V  G+G
Sbjct: 354 EVYSQFGFEYF-VELSTRPEDSMGSDEDWEMATNGLRKALEDMG------LDYIVNEGDG 406

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           AFYGPK ++ L+D++GR WQCGTIQ+DF +P RF+  Y      K  P+MIHR  FGSIE
Sbjct: 407 AFYGPKIDFHLRDSLGRTWQCGTIQLDFQMPQRFDLEYTAEDGNKKRPIMIHRVCFGSIE 466

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
           RFIGI+IE+F G  P+WL+P+Q  V  ++  +++YA  +   LK+  +  E D ++E + 
Sbjct: 467 RFIGILIEHFAGKFPVWLAPVQVKVIPVSEKSMDYATGVYEKLKAAGIRTELDHKDEKVG 526

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           YKIR+  ++K+P +++ G+KEA+E +I +R           L   I  + +
Sbjct: 527 YKIRQAQLEKVPFMLVLGEKEAAEGAITVRSRDKGDLGAAQLEAFIGDVKR 577


>gi|150865919|ref|XP_001385328.2| threonyl-tRNA synthetase [Scheffersomyces stipitis CBS 6054]
 gi|149387175|gb|ABN67299.2| threonyl-tRNA synthetase [Scheffersomyces stipitis CBS 6054]
          Length = 730

 Score =  587 bits (1514), Expect = e-165,   Method: Composition-based stats.
 Identities = 236/656 (35%), Positives = 359/656 (54%), Gaps = 30/656 (4%)

Query: 3   SDIKLTFPDGSIKN-FPVHATGSDVAESISRSLAKKAVAVAING-KVCDLSDPVREG-SI 59
             IK+T  DG++K       T  D+A SI +S  ++ V   ING ++ DL  P+ +  ++
Sbjct: 76  KPIKITLKDGTVKEGVAYDTTPLDIATSIGKSFLERQVIAKINGSQLWDLPRPLEDDVTL 135

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD---KEQPFSS 116
           + +  + P   AV  HS AHI+ EA +  +    ++ GP  EDGF+YD      E   S 
Sbjct: 136 DFLDFDHPEGKAVFWHSSAHILGEACECHYGSH-LSHGPPTEDGFFYDMSINGGETSVSQ 194

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
            + + +E+   + I     F +  +S E   ++F   K   K  I + IP   + T+YR 
Sbjct: 195 SDFSNLEQVATKAIKEKQKFERLEMSKEDLLKMFHYNKYKVKF-ISDKIPDGTSTTVYRC 253

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           G   DLC GPH+  +G++K F K++K + +Y+ GDS    L R+YG ++  ++ +T +L 
Sbjct: 254 GPLIDLCVGPHIPHSGRIKAF-KVLKNSSSYFLGDSANDSLQRVYGISFPDKKLMTDHLK 312

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEIN 295
           FL E+ +RDHR++ +E +LF   E   G  FW   G +I+  L+ ++R + +   ++E+ 
Sbjct: 313 FLAEAAERDHRRIGKEQELFFFNEMSPGSAFWLPHGTRIYNALVQFIRDEYQVRGFDEVI 372

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP + +  LW+ SGHW +Y+ NMF          +  TF LKPMNCPGH  +F    +SY
Sbjct: 373 TPNMFNHKLWETSGHWGNYKENMFTFDV------EKETFGLKPMNCPGHCVIFKSRERSY 426

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP R+A+FG ++RNE SG+L GL RVR F QDDAH+FCT +Q+ +E     + +  +Y
Sbjct: 427 RELPWRVADFGVLHRNEFSGALSGLTRVRRFQQDDAHIFCTTDQIGSEIKGAFDFLNKVY 486

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
             FGF+  M +LSTRPEK VG    W+ AE +++  L+  K      +N     G+GAFY
Sbjct: 487 GTFGFQFKM-ELSTRPEKYVGEIETWNSAEKMLEKSLNEFKGEGGWELN----PGDGAFY 541

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC----HPVMIHRAVFGSI 531
           GPK + ++ DA+ R +QC TIQ+DF LP+RF   Y    ++K      PVMIHRA+ GS+
Sbjct: 542 GPKIDIMISDALNRWFQCATIQLDFQLPNRFELEYKAETNDKGSSTSRPVMIHRAILGSV 601

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH-LSIETDFRNET 590
           ER   I+IE++KG  P WLSP Q ++  +     EY Q++   L   +    + D    T
Sbjct: 602 ERMTAILIEHYKGKWPFWLSPRQILIVPVGPKYYEYGQKLQKELNDKYSFYADVDVSGNT 661

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK----VSLLDAIPILT 642
           +  KIR   + K   I I GD+E    S+ +R       Q     V   + +  L 
Sbjct: 662 LPKKIRTGQLYKYNFIFIVGDEEEQSASVNVRNRDIPEEQGKNAMVKFDEVVKQLV 717


>gi|225016667|ref|ZP_03705859.1| hypothetical protein CLOSTMETH_00576 [Clostridium methylpentosum
           DSM 5476]
 gi|224950631|gb|EEG31840.1| hypothetical protein CLOSTMETH_00576 [Clostridium methylpentosum
           DSM 5476]
          Length = 646

 Score =  587 bits (1514), Expect = e-165,   Method: Composition-based stats.
 Identities = 221/650 (34%), Positives = 355/650 (54%), Gaps = 19/650 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+T   G++K F    + +D+A+S+   L K A A  I GK CDL  PV  +  +EI+
Sbjct: 1   MIKVTLKGGTVKEFEPGVSIADIAKSLGMGLYKAACAGKIGGKACDLRTPVTEDCEVEIL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T ++        H+ +HI+A+AV+ ++P  ++AIGP +E+GFYYD + E+ F+ ++L +I
Sbjct: 61  TFDNVDGKHAFWHTASHILAQAVKRLYPNAKLAIGPAVENGFYYDIENEKGFTPEDLTKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPA-KENVTLYRQGEWFD 181
           E +M++I+          L  ++A +L +   E YKVE+ +      E ++ Y+QGE+ D
Sbjct: 121 EAEMKKIVKSGLELECFSLEPDEAVKLMQEAGEPYKVELAKEHAEKGEKISFYKQGEFVD 180

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LC GPH+ S   VK   KL +  GAYWRGD+N   L RIYGTA+    EL  YL  +EE+
Sbjct: 181 LCAGPHLMSVSPVK-AIKLTQATGAYWRGDANNAQLVRIYGTAFPKASELEAYLAAVEEA 239

Query: 242 EKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQV 299
           +KRDH  + R++  F      G G+     KG ++ Q L  ++   + K  Y    TP  
Sbjct: 240 KKRDHNVIGRKLGYFTTVDVIGQGLPVLLPKGARVIQILQRFVEDEEEKRGYLLTKTPYF 299

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
                ++ SGHW  YR  MF +    D  KD   FAL+PM CP     + + ++SYR+LP
Sbjct: 300 AKSDFYKISGHWQHYREGMFVM---GDEEKDKEVFALRPMTCPFQFQAYLNEMRSYRDLP 356

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R  E  +++RNE SG +HGL+RVR FT  + H+ C  +Q+  E  +   L   + +  G
Sbjct: 357 LRYNETSTLFRNEASGEMHGLIRVRQFTISEGHLACRPDQVEEEFKQCLELAKFMLETLG 416

Query: 420 FEKIMVKL-----STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            ++ +            +K +GS   W++ +N+M+G+L+ ++      ++     GE AF
Sbjct: 417 LDEDVTYRFSKWDENNRDKYIGSAEEWENVQNLMRGILNHLE------LDYTEADGEAAF 470

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K+  G++    TIQ+DF L SRF+  Y ++  +K +P +IHR   G  ER 
Sbjct: 471 YGPKLDIQIKNVYGKEDTLITIQIDFQLASRFDMVYTDTDGQKKYPYVIHRTSLGCYERT 530

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
           + +++E + G LPLW++P QA +  I     + A    + L+   L +E D R+E I YK
Sbjct: 531 LALLLEKYAGALPLWIAPEQARILPIGERQHDAAYACRDELRKAGLRVEVDDRSEKIGYK 590

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IRE  ++KIP +++ GDKE    ++ +R         + +   +     E
Sbjct: 591 IREAQLEKIPYMLVIGDKEVEANAVSVRSRKHGEMGAMPVTQFMEHALNE 640


>gi|58337807|ref|YP_194392.1| threonyl-tRNA synthetase [Lactobacillus acidophilus NCFM]
 gi|227904456|ref|ZP_04022261.1| theronyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
 gi|73919799|sp|Q5FIW3|SYT_LACAC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|58255124|gb|AAV43361.1| theronyl-tRNA synthetase [Lactobacillus acidophilus NCFM]
 gi|227867831|gb|EEJ75252.1| theronyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
          Length = 644

 Score =  587 bits (1513), Expect = e-165,   Method: Composition-based stats.
 Identities = 225/644 (34%), Positives = 353/644 (54%), Gaps = 22/644 (3%)

Query: 6   KLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITP 64
            +T PDGS K F    +  +VA SI+ SL K AV   +NG+V  L   +  +  I IIT 
Sbjct: 4   SVTLPDGSKKEFDKAVSVKEVASSIATSLGKAAVGAKVNGQVKPLDYEIDSDVEIAIITD 63

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           +D   L ++R + A       +  +PE+++      E GFY D DK+      EL ++EK
Sbjct: 64  KDEEGLDILRATAAFAFEAVAKKKYPELRLGQHVADEGGFYVDTDKKDQIKVTELPELEK 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
            M+++I    P     +   +  E+F+   + +K ++L+ I   + V  Y+ G++ D   
Sbjct: 124 AMEKLIKSGQPIEHVVMDKSELEEMFK--DDPFKSDLLKKI-DSDKVDAYKLGDFVDFGF 180

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
              + +TG++K F KL+ VAGAYW G S+ PML RI+GTA+  +  L + L    E ++R
Sbjct: 181 DALLPNTGKIKHF-KLLSVAGAYWLGKSSNPMLQRIFGTAFFKEAALKEDLKRRAEIKER 239

Query: 245 DHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQ 302
           DHR + R++DLF +      G+ +W  KG  I + +  Y+  R++ D Y+ + TP +++ 
Sbjct: 240 DHRTIGRDLDLFFVDPKVGAGLPYWMPKGATIRRVVERYIIDREVADGYKHVYTPVLMNL 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             ++ SGHW  YR +MF          D     L+PMNCP H+ ++ H ++SYR+LP+R+
Sbjct: 300 DAYKTSGHWAHYRDDMFPPMDMG----DGEMLELRPMNCPSHIQIYKHHIRSYRDLPLRV 355

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  KI  LI+ +Y+DF    
Sbjct: 356 AELGMMHRYEKSGALSGLQRVREMTLNDGHTFVELDQVQSEFAKILKLIMDVYRDFDITD 415

Query: 423 IMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
              +LS R  K       +D +W+ ++ ++KG +D +       ++     GE AFYGPK
Sbjct: 416 YYFRLSYRDPKNTDKYFANDEMWERSQKMLKGAMDDLG------LDYVEAEGEAAFYGPK 469

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +   K A+G D    TIQ+DF LP RF   YV    E+  PVM+HR + G++ERFI  +
Sbjct: 470 LDIQTKTALGNDETMSTIQLDFMLPERFGLTYVGKDGEEHRPVMVHRGIVGTMERFIAYL 529

Query: 539 IENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
            E +KG  P WL+P+QA +  + +    EYA+++   L      +E D RNE + YKIRE
Sbjct: 530 TEIYKGAFPTWLAPVQAEIIPVNNEAHGEYAEKVRQELAKRGFRVEVDDRNEKMGYKIRE 589

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
              +K+P  ++ GD+E    S+ +RR+G+      SL D I  +
Sbjct: 590 SQTQKVPYTLVLGDEEMKNGSVNVRRYGTDEEISKSLDDFINEI 633


>gi|326789266|ref|YP_004307087.1| threonyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
 gi|326540030|gb|ADZ81889.1| threonyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
          Length = 586

 Score =  587 bits (1512), Expect = e-165,   Method: Composition-based stats.
 Identities = 255/591 (43%), Positives = 374/591 (63%), Gaps = 15/591 (2%)

Query: 55  REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPF 114
           ++G ++    E+       RH+ +H++A+AV+ ++P  + AIGP+IEDGFYYDF+ +  F
Sbjct: 6   KDGLVKDFKFEEKEGKNAFRHTASHVLAQAVKRLYPTTKCAIGPVIEDGFYYDFEFDFEF 65

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
           ++  L +IE++M++I+       +  L+ E+A  L + K E YK+E++  +P    ++ Y
Sbjct: 66  TAANLVEIEQEMRKIVKESLSLQRYTLNREEALALMKEKNEPYKIELINDLPEDAQLSFY 125

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
           +QG++ +LC GPHV +T  +K F      AGAYWRG+    ML+RIYGTA+    +L  Y
Sbjct: 126 QQGDYLELCAGPHVTNTSLIKAFKLTAT-AGAYWRGNEKNKMLTRIYGTAFPKSSDLEAY 184

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEE 293
           L  +EE++KRDHRKL +E+ LF I ++G G  F+  KG  +   LI Y R+   ++ Y E
Sbjct: 185 LQSIEEAKKRDHRKLGKELGLFTILDEGPGFPFFLPKGMVLKNLLIDYWRKLHTREGYVE 244

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           I+TP +L++ LW+ SGHWD YR NM+       T+ D   FA+KPMNCPG + V+     
Sbjct: 245 ISTPMMLNKELWETSGHWDHYRENMYT------TVIDDTDFAIKPMNCPGGMLVYKLQPH 298

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYRELP+R+ E G V+R+E SG+LHGLMRVR FTQDDAH+F T+EQ+ +E   +  LI  
Sbjct: 299 SYRELPIRMGELGLVHRHEKSGALHGLMRVRCFTQDDAHIFMTQEQITDEIKGVVRLIDE 358

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           +Y  FGF+   V+LSTRPE  +GSD  W+ A   +K  LD ++      +   +  G+GA
Sbjct: 359 VYSKFGFKYH-VELSTRPENSIGSDEDWNVATEGLKKALDEMQ------LEYVINEGDGA 411

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK ++ L+D+IGR WQCGTIQ+DF LP RF A Y+ +  +K  P+MIHR VFGSIER
Sbjct: 412 FYGPKIDFHLEDSIGRTWQCGTIQLDFQLPVRFEAEYIGADGKKHRPIMIHRVVFGSIER 471

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           FIGI+IE++ G  PLWL+P+Q  V  I+    EY   +   L+   +  E D R+E I Y
Sbjct: 472 FIGILIEHYAGKFPLWLAPVQVKVLPISDKFSEYGAFVMAELQKQGIRCEIDNRDEKIGY 531

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIRE  + K+P +++ G KE     + IRR   +T +  S+ + + +L  E
Sbjct: 532 KIREAQLGKVPYMVVVGQKEVESNLVTIRRRDESTQEGYSIQEFVQLLNNE 582


>gi|149238003|ref|XP_001524878.1| threonyl-tRNA synthetase [Lodderomyces elongisporus NRRL YB-4239]
 gi|146451475|gb|EDK45731.1| threonyl-tRNA synthetase [Lodderomyces elongisporus NRRL YB-4239]
          Length = 754

 Score =  586 bits (1511), Expect = e-165,   Method: Composition-based stats.
 Identities = 237/653 (36%), Positives = 359/653 (54%), Gaps = 26/653 (3%)

Query: 3   SDIKLTFPDGSIKN-FPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIE 60
             IK+T  DG+ K       +  D+A SI +S A + V   +NG++ D+  P+  + +++
Sbjct: 102 KPIKITLKDGTEKEGTAWETSPMDIANSIGKSFADRQVIAKVNGELWDMPRPLEGDVTLQ 161

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF---DKEQPFSSD 117
            +  E P   AV  HS  HI+ E+ +  +    ++ GP  +DGF+YD    D     + +
Sbjct: 162 FLDFEHPEGKAVFWHSSVHILGESCECHY-GCHLSHGPPTDDGFFYDMSINDGTTFVTQE 220

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +   +E    + I     F +  ++ E   ++F   K   K  I + IP   + T+YR G
Sbjct: 221 DYPSLETIATKAIKEKQTFERLEMTKEDLLKMFAYNKYKVKF-ISDKIPDGTSSTVYRCG 279

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
              DLC GPH+  +G++K F K++K + +Y+ GD++   L RIYG ++  ++ +T++L F
Sbjct: 280 PLIDLCAGPHIPHSGKIKAF-KVLKNSSSYFLGDASNDSLQRIYGVSFPDKKLMTEHLKF 338

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINT 296
           L E+ +RDHRK+ RE +LF   E   G   W   G +I+ TL+  +R + +   YEE+ T
Sbjct: 339 LAEAAERDHRKIGREQELFIFNEVSPGSAMWLPHGTRIYNTLVDTLRYEYRKRGYEEVIT 398

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +    LW+ SGHW +Y+ NMF+ +       +  TF LKPMNCPGH  +F    +SYR
Sbjct: 399 PNMYSTKLWETSGHWQNYKENMFSFEV------EKETFGLKPMNCPGHCVLFKSRERSYR 452

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ELP R+A+FG ++RNE SG+L GL RVR F QDDAH+FCT EQ+  E   + +L+  +Y 
Sbjct: 453 ELPWRVADFGVIHRNEFSGALSGLTRVRRFQQDDAHIFCTTEQIGTEIAGVFDLLKKMYG 512

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
            FGFE  M +LSTRPEK VG    W+ AE  +   LD      +  +N     G+GAFYG
Sbjct: 513 IFGFEFKM-ELSTRPEKYVGDLETWNSAEEKLANALDEFLGKGKWELN----PGDGAFYG 567

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA-FYVNSHSEKCHPVMIHRAVFGSIERFI 535
           PK + ++ DA+ R +QC TIQ+DF LPSRF   +  +S++    PVMIHRA+ GS+ER  
Sbjct: 568 PKIDIMISDALKRWFQCATIQLDFQLPSRFELEYRTDSNNALERPVMIHRAILGSVERMT 627

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH-LSIETDFRNETINYK 594
            I+ E++KG  P WLSP Q ++  +     EY +++  LL + H    + D    T+  K
Sbjct: 628 AILTEHYKGKWPFWLSPRQILIVPVGPKYYEYGEKLQKLLNNEHFFYCDIDVSGNTLPKK 687

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFG----STTTQKVSLLDAIPILTK 643
           +R   + K   I I G+ E    S+ IR           + V + D I  L  
Sbjct: 688 VRSGQMLKYNFIFIVGEAEEQNNSVNIRNRDIPEEQGKNEMVKVDDVIKQLIN 740


>gi|255710799|ref|XP_002551683.1| KLTH0A05192p [Lachancea thermotolerans]
 gi|238933060|emb|CAR21241.1| KLTH0A05192p [Lachancea thermotolerans]
          Length = 740

 Score =  586 bits (1511), Expect = e-165,   Method: Composition-based stats.
 Identities = 236/670 (35%), Positives = 351/670 (52%), Gaps = 43/670 (6%)

Query: 1   MPS-DIKLTFPDGSIKN-FPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR--- 55
           MP   IK+   DGS K       T  D+A+ I++S   K      NG++ DL  P+    
Sbjct: 75  MPRVPIKVVLKDGSEKEATAWETTPMDIAKQIAKSFPDKQCISKANGQLWDLERPLEGKE 134

Query: 56  --EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK--- 110
             E  +E    +      V  HS AH++ EA +       + +GP  EDGF+Y+F     
Sbjct: 135 GDEVKLEFFDFDSDEGKRVFWHSSAHVLGEACECNL-GAHICLGPPTEDGFFYEFAVKNA 193

Query: 111 --------EQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL 162
                   E+  S ++   +E   + +I     F +  +S E   ++F   K      + 
Sbjct: 194 PNAPADAPERTVSQNDFPALESVSKNVIKEKQKFERLVMSKEDLLKMFHYSKFKT-YLVS 252

Query: 163 ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYG 222
             +P   + T+YR G+  DLC GPH+  TG++K F KL+K +  Y+ GDSN   L RIYG
Sbjct: 253 TKVPDGGSTTVYRCGKLIDLCVGPHIPHTGRIKAF-KLLKNSSCYFLGDSNNDSLQRIYG 311

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISY 282
            ++  ++ +  +L FL E+  RDHRK+ RE +LF+  E   G  FW   G +I+  L+  
Sbjct: 312 ISFPDKKLMDAHLKFLAEASMRDHRKIGREQELFYFNEMSPGSCFWLPHGTRIYNNLVDL 371

Query: 283 MRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           MR + +   ++E+ TP + +  LW+ SGHW +Y+ NMF  +       +  TF LKPMNC
Sbjct: 372 MRAEYRKRGFDEVITPNMYNSKLWETSGHWGNYKENMFTFEV------EKETFGLKPMNC 425

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
           PGH  +F    +SY+ELP R+A+FG ++RNE SG+L GL RVR F QDDAH+FC + Q+ 
Sbjct: 426 PGHCILFKSRERSYKELPWRVADFGVIHRNEFSGALTGLTRVRRFQQDDAHIFCAQNQIE 485

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E     + +  +Y  FGFE  M +LSTRPEK VG    W++AE  ++  L       + 
Sbjct: 486 QEIENCFSFLQYVYGVFGFEFKM-ELSTRPEKFVGEIETWNNAEAKLESAL------RKW 538

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK---- 517
             N  +  G+GAFYGPK +  + DA+ R  QC TIQ+DF LP+RF   + +  +++    
Sbjct: 539 GGNWELNPGDGAFYGPKIDIKISDALRRWHQCATIQLDFQLPNRFELEFKSKDNQENENY 598

Query: 518 CHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKS 577
             PVMIHRA+ GS+ER   I+ E+F G  P WLSP Q +V  +     EYAQE+ + L  
Sbjct: 599 ERPVMIHRAILGSVERMTAILTEHFAGKWPFWLSPRQVLVVPVGVKYQEYAQEVRDKLCE 658

Query: 578 HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ----KVS 633
                + D    T+  K+R   + K   I I G++E +E+S+ IR       Q     ++
Sbjct: 659 QDFYADVDLTGNTLQKKVRNGQMLKYNFIFIVGEQEMTEKSVNIRNRDVIEQQGKNATIA 718

Query: 634 LLDAIPILTK 643
               +  L K
Sbjct: 719 FETVLQQLKK 728


>gi|167042805|gb|ABZ07523.1| putative tRNA synthetase class II core domain (G, H, P, S and T)
           [uncultured marine microorganism HF4000_ANIW137I15]
          Length = 627

 Score =  586 bits (1511), Expect = e-165,   Method: Composition-based stats.
 Identities = 260/615 (42%), Positives = 380/615 (61%), Gaps = 20/615 (3%)

Query: 39  VAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP 98
           +   +  ++ DL     +     IT +DP    V  HS AHIMAEAVQ ++P  +V IGP
Sbjct: 23  LVWKVGDQLVDLVAKDDKAEAREITFDDPEGRQVYHHSTAHIMAEAVQDLFPGTKVTIGP 82

Query: 99  IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYK 158
            IE+GFYYDFD+++PF+ D+L +IE +M+EI A + PF+++ +S E+AR+LF+ + E YK
Sbjct: 83  PIENGFYYDFDRDEPFTPDDLERIETRMREIRAENRPFVREPVSKEEARKLFQERDEPYK 142

Query: 159 VEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLS 218
           +E+L+ IP  E V++YRQGEW DLCRGPHV STG ++   KL+ VAGAYWRGD    ML 
Sbjct: 143 LELLDGIP-DETVSIYRQGEWLDLCRGPHVPSTGFIE-AVKLLSVAGAYWRGDERNKMLQ 200

Query: 219 RIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQ 277
           RIYGT++ TQ+ L ++L  LEE+ +RDHR L +E+ LF I E  GSG+++W   G  + +
Sbjct: 201 RIYGTSFPTQEALDEHLAHLEEARRRDHRVLGKELGLFLIHEQAGSGLVYWLPHGAVLRK 260

Query: 278 TLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFAL 336
            +  +     ++  YE +  P ++   L++ SGH+D Y+ NMF ++       D   +  
Sbjct: 261 VIERFWEDEHVRRGYELVVIPHLVHSRLFRTSGHYDFYKENMFTLEV------DGEEYVA 314

Query: 337 KPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT 396
           KPMNCPGH+ ++ +  +SYR+LP+R AE G+VYRNE SG LHG++RVRGFTQDDAH+FCT
Sbjct: 315 KPMNCPGHILIYQNERRSYRDLPIRYAEMGTVYRNERSGVLHGMLRVRGFTQDDAHIFCT 374

Query: 397 KEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVL 452
            EQ+  E L + ++ + +   FGFE+  ++LS R      K  GSD  W  AE  +   L
Sbjct: 375 PEQLPGEILGVLDMTLFMLATFGFERFEIELSVRDPAHPEKYAGSDDEWKAAEASLVQAL 434

Query: 453 DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
           D      +  +      GE  FYGPK +  + DA+GR WQ  TIQ DFNLP RF+  YV 
Sbjct: 435 D------ERSLPYRRCEGEAVFYGPKIDVKIVDALGRGWQASTIQFDFNLPRRFDLKYVG 488

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIA 572
           +  +   P M+HRA+ GS+ERF+G +IE+  G  PLWLSP+Q  V  IT    ++A+ +A
Sbjct: 489 ADGDFHTPYMVHRALLGSLERFVGALIEHTAGAFPLWLSPVQVKVLPITERNHDHARRVA 548

Query: 573 NLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
             LK   L ++ D RNE + YKIR+  +++ P +++ GD+E   + + +R         +
Sbjct: 549 ASLKESGLRVDVDDRNEKLGYKIRQGRLERTPYLLVIGDREQESQQVAVRDRTEGNLGAM 608

Query: 633 SLLDAIPILTKESLP 647
            L   +  +  E  P
Sbjct: 609 GLDAFLDRVQPEMAP 623


>gi|89897864|ref|YP_514974.1| threonyl-tRNA synthetase [Chlamydophila felis Fe/C-56]
 gi|123722330|sp|Q256F9|SYT_CHLFF RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|89331236|dbj|BAE80829.1| threoninyl tRNA synthetase [Chlamydophila felis Fe/C-56]
          Length = 635

 Score =  585 bits (1509), Expect = e-165,   Method: Composition-based stats.
 Identities = 254/637 (39%), Positives = 367/637 (57%), Gaps = 19/637 (2%)

Query: 11  DGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI-EIITPEDPRS 69
           D      P  +T +D A  I  S     V   IN ++ DLS  + EG + + +T  DP  
Sbjct: 7   DNETFELPTGSTAADFASKIKNSHYFAGVV--INDQIKDLSTTLSEGDVLKFVTFTDPEG 64

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
             +  H+ AH++A+AV  +WP+    IGP+I+ GFYYDF      S D+   IE  +++I
Sbjct: 65  REIFLHTSAHMLAQAVLRLWPQAIPTIGPVIDLGFYYDFA-NLSISEDDFPAIENMVEQI 123

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
                   K+  + +K   L E     +KVE+++  P  EN+T Y QGE+ DLCRGPH+ 
Sbjct: 124 AKERFEISKKTFN-DKQEALQEFASNPFKVELIQEFPEDENITCYSQGEFMDLCRGPHLP 182

Query: 190 STGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKL 249
           ST  VK F KL++ + AYWRGD +R  L RIYG ++ T +EL ++L+ LEE++KRDHR L
Sbjct: 183 STAPVKAF-KLLRTSAAYWRGDPSRESLVRIYGVSFPTTKELKEHLHQLEEAKKRDHRVL 241

Query: 250 AREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQS 308
             ++DLF   E  +G+ F+H +G  I+  LI Y +R      Y+EI TPQ++++ LW+ S
Sbjct: 242 GTKLDLFSQQECSAGMPFFHPRGMIIWDALIGYWKRLHQLAGYKEILTPQLVNRSLWEVS 301

Query: 309 GHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV 368
           GHW +Y+ NM+ +K       D   +A+KPMNCPG +  +   L SY+E P+R+AE G V
Sbjct: 302 GHWSNYKENMYTLKI------DEEDYAIKPMNCPGCMLYYKTRLHSYKEFPLRIAEIGHV 355

Query: 369 YRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLS 428
           +R E SG+L GLMRVR F QDDAHVF T EQ+  E L I NL+  +Y  FG E  +   +
Sbjct: 356 HRYEISGALSGLMRVRAFHQDDAHVFLTPEQVEEETLNILNLVSELYSTFGLEYHLELST 415

Query: 429 TRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIG 488
              +  +GSD LWD A   ++  L              +  G+GAFYGPK +  +KDAI 
Sbjct: 416 RPEKATIGSDELWDLATAALERALINSNTP------FVINPGDGAFYGPKIDIHVKDAIQ 469

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPL 548
           R WQCGTIQ+D  LP RF   Y N+  EK  P+M+HRA+FGSIERF+GI+IE+FKG  PL
Sbjct: 470 RTWQCGTIQLDMFLPERFELEYTNAQGEKSTPIMLHRALFGSIERFLGILIEHFKGRFPL 529

Query: 549 WLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIII 608
           WLSP    + T+       AQE+A   +     +  D  NE+++ KIR     ++  ++ 
Sbjct: 530 WLSPEHVRLITVADRHQPRAQELATAWQQLGFVVTVDDSNESVSKKIRNAQNMQVNYMVT 589

Query: 609 CGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
            GD+E  E ++ +R   +     +++   I  + +E 
Sbjct: 590 LGDREIEENTLAVRTRDNRVLNNMTIDTFINTILEEK 626


>gi|156838419|ref|XP_001642915.1| hypothetical protein Kpol_411p2 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156113495|gb|EDO15057.1| hypothetical protein Kpol_411p2 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 729

 Score =  585 bits (1509), Expect = e-165,   Method: Composition-based stats.
 Identities = 238/668 (35%), Positives = 364/668 (54%), Gaps = 41/668 (6%)

Query: 1   MPS-DIKLTFPDGS-IKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR--- 55
           MP   +K+   DG+ +       +  D+A +IS+SL  +     +NG + DL  P+    
Sbjct: 64  MPRVPLKVILKDGAQVDATSWETSPMDIARNISKSLPDRLCIAKVNGDLWDLERPLEGNE 123

Query: 56  --EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD---- 109
             E  +E++  E      V  HS AH++ EA +       +  GP  EDGF+Y+F     
Sbjct: 124 NDEIKLELLDFESDEGKRVFWHSSAHVLGEACECNL-GAHINYGPPTEDGFFYEFAARDS 182

Query: 110 -------KEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL 162
                  +E+  S  +   +E   + +I     F +  +S E   E+F+  K  YK  ++
Sbjct: 183 LKDPKECEERTVSQADFPNLEGVAKNVIKEKQKFERLVMSKEDLLEMFKYSK--YKTYLV 240

Query: 163 E-SIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIY 221
           E  IP   + T+Y+ G+  DLC GPH+  TG++K F KL+K +  Y+ GD+    L R+Y
Sbjct: 241 ETKIPDGTSTTVYKCGKLIDLCVGPHIPHTGRIKAF-KLLKNSACYFLGDATNESLQRVY 299

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLIS 281
           G ++  ++ +  +L FLEE+ KRDHR+L +E +LF   E   G  FW   G +I+ TL+ 
Sbjct: 300 GISFPDKKLMDAHLKFLEEAAKRDHRRLGKEQELFLFNEMSPGSCFWLPHGTRIYSTLVD 359

Query: 282 YMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
            MR + +   YEE+ TP + +  LW+ SGHW +Y+ NMF  +       +  T+ LKPMN
Sbjct: 360 MMRTEYRKRGYEEVITPNMYNSKLWETSGHWANYKENMFTFEV------EKETYGLKPMN 413

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
           CPGH  +F    +SYRELP R+A+FG ++RNE SG+L GL RVR F QDDAH+FCT++Q+
Sbjct: 414 CPGHCLMFKSRERSYRELPWRVADFGVIHRNEYSGALSGLTRVRRFQQDDAHIFCTQDQI 473

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQ 460
             E   I N +  +Y  FGFE  M +LSTRPEK VG    W++AE  ++  L+      +
Sbjct: 474 EGEIENIFNFLQFVYGVFGFEFKM-ELSTRPEKYVGELETWNNAEAKLQSALE------K 526

Query: 461 DRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK--- 517
              +  +  G+GAFYGPK + ++ DA+ R  QC TIQ+DF LP+RF   +    +++   
Sbjct: 527 WGGDWELNPGDGAFYGPKIDIMISDALKRWHQCATIQLDFQLPNRFELEFKAKDNQENEN 586

Query: 518 -CHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLK 576
              PVMIHRA+ GS+ER   I+ E+F G  P WLSP Q +V  +     EYAQE+ + L 
Sbjct: 587 YERPVMIHRAILGSVERMTAILTEHFAGKWPFWLSPRQVLVVPVGVKYQEYAQEVRDKLH 646

Query: 577 SHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
           +     + D    T+  K+R   + K   I I G+ E + +++ IR       Q  +   
Sbjct: 647 AAGFYADVDLSGNTLQKKVRTGQLLKYNFIFIVGEDELTNKTVNIRNRDIVEQQGKNAAI 706

Query: 637 AIPILTKE 644
           A+ ++ ++
Sbjct: 707 ALDLVVEQ 714


>gi|323466103|gb|ADX69790.1| Threonyl-tRNA synthetase 1 [Lactobacillus helveticus H10]
          Length = 661

 Score =  585 bits (1509), Expect = e-165,   Method: Composition-based stats.
 Identities = 225/644 (34%), Positives = 355/644 (55%), Gaps = 22/644 (3%)

Query: 6   KLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITP 64
            +T PDGS K+F    T +D+A +I+ SL K AVA  +NG++  L   +  +  + IIT 
Sbjct: 21  SITLPDGSKKDFEESLTIADLAHNIATSLGKAAVAGKVNGELKPLDYKLDSDSEVAIITN 80

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           +D   L V+R + A +     +  +PE+++      E GFY D DK+      EL ++EK
Sbjct: 81  KDEEGLDVLRATAAFVFEAVAKCEYPELRLGEHVADEGGFYVDTDKDDQIKVGELPKLEK 140

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
            MQ++I          ++  +  +L++   + +K E+L  +   + V  Y+ G++ D   
Sbjct: 141 AMQKVIKNGEKIEHVQIAKSELEDLYK--NDKFKSELLAKV-EGDTVDAYKLGDFVDFGF 197

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
              + +TG++K+F KL+ VAGAYW G S+ PML RI+GTA+  + +L   L   +E ++R
Sbjct: 198 DALLPNTGKIKQF-KLLSVAGAYWLGKSSSPMLQRIFGTAFFKEADLKADLKRRQEIKER 256

Query: 245 DHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQ 302
           DHR + R++DLF +      G+ +W  KG  I + +  Y+  R++ D Y+ + TP +++ 
Sbjct: 257 DHRTIGRDLDLFFVDPKVGAGLPYWMPKGATIRRVVERYIIDREVADGYQHVYTPVLMNL 316

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             ++ SGHW  YR +MF          D     L+PMNCP H+ +F H ++SYR+LP+R+
Sbjct: 317 DAYKTSGHWAHYRDDMFPPMDMG----DGEMLELRPMNCPSHIQIFKHHIRSYRDLPLRV 372

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AE G ++R E SG+L GL RVR  T +D H F   +Q+  E  KI  LI+ +YKDF    
Sbjct: 373 AELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQVQTEFAKILKLIMDVYKDFDITD 432

Query: 423 IMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
              +LS R  K       +D +W+ ++ ++KG +D +       ++     GE AFYGPK
Sbjct: 433 YYFRLSYRDPKNTDKYFANDEMWEKSQKMLKGAMDDLG------LDYVEAEGEAAFYGPK 486

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +   K A+G D    TIQ+DF LP RF   YV    E+  PVMIHR + G++ERFI  +
Sbjct: 487 LDIQTKTALGNDETMSTIQLDFMLPDRFGLTYVGKDGEEHRPVMIHRGIVGTMERFIAYL 546

Query: 539 IENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
            E +KG  P WL+P+QA +  + +    EYA+++   L      +E D RNE + YKIRE
Sbjct: 547 TEIYKGAFPTWLAPVQAEIIPVNNEAHGEYAEKVRAELAKRGFRVEVDDRNEKMGYKIRE 606

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
              +K+P  ++ GD+E     + +R +G+      SL D I  +
Sbjct: 607 SQTQKVPYTLVLGDEEMKSGKVNVRCYGTDEEISKSLDDFINEI 650


>gi|332297469|ref|YP_004439391.1| threonyl-tRNA synthetase [Treponema brennaborense DSM 12168]
 gi|332180572|gb|AEE16260.1| threonyl-tRNA synthetase [Treponema brennaborense DSM 12168]
          Length = 583

 Score =  585 bits (1509), Expect = e-165,   Method: Composition-based stats.
 Identities = 279/585 (47%), Positives = 388/585 (66%), Gaps = 20/585 (3%)

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           E    LA+IRHS +H+MA+AV +++P  +VAIGP I++GFYYDF+  +P + ++LA IEK
Sbjct: 4   EQKERLAMIRHSTSHVMAQAVLTLFPGSKVAIGPSIDNGFYYDFELTRPITQEDLAAIEK 63

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
           +M++I++ +  F ++ +S  +A ++     + YKVE++  +PA E +++Y Q  + DLCR
Sbjct: 64  EMRKIVSGNHEFTRREVSRAEALKM--FADQPYKVELINDLPADEPISVYTQAGFTDLCR 121

Query: 185 GPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           GPHV +T ++  + FKLMK AGAYWRGD  RPML+RIYGTAW    EL  Y+  L E+E+
Sbjct: 122 GPHVANTKEINAQSFKLMKTAGAYWRGDEKRPMLTRIYGTAWEKPVELKAYVDMLAEAER 181

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRK+ +EMDLFHI ED  G IFWH  GW I++ L  Y+R KIK   Y E+ TP V+ Q
Sbjct: 182 RDHRKIGKEMDLFHIDEDSPGQIFWHPNGWTIYRILEDYVRTKIKADGYVEVKTPFVMPQ 241

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHW  Y+ NMF       T  + R FALKPMNCPGH+ +F   ++SY++LP+R+
Sbjct: 242 SLWERSGHWAKYKENMFI------TESEKRIFALKPMNCPGHIEIFKQRIRSYKDLPLRM 295

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS  RNE SG+LHG+MRVRGF QDDAH+FCT+ Q+ +E  K  +L+  +YKDFGF  
Sbjct: 296 AEFGSCTRNEASGALHGIMRVRGFVQDDAHIFCTEAQIPSEVAKFCHLLKDMYKDFGFTD 355

Query: 423 IMV--KLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
             +  K STRPEKRVG DA WD AE  +           Q  +   +  GEGAFYGPK E
Sbjct: 356 DKILVKFSTRPEKRVGDDATWDRAEGALADACK------QAGLAYEIQPGEGAFYGPKLE 409

Query: 481 YILKDAIGRDWQCGTIQVDFNLP--SRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           + L DA+GR+WQCGTIQVD+ LP   R NA Y+   + K HPVM+HRAV GS+ERFIGI+
Sbjct: 410 FTLVDALGREWQCGTIQVDYQLPSAERLNAEYIGDDNAKHHPVMLHRAVLGSLERFIGIL 469

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IENF G  P WL   Q +V  +  +   YA+++   LK+  +  + D  N+ +N KIR  
Sbjct: 470 IENFAGAFPTWLHYQQTVVIPVAPAFNGYAEKVQAALKAAGIRSDCDLGNDRMNAKIRLA 529

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             +KIP +++ G+KEA++ ++ +R       Q +S+ D    + +
Sbjct: 530 QTQKIPYMLVVGEKEAADGTVAVRFRDGRPQQIMSVGDFTAYVRE 574


>gi|331001642|ref|ZP_08325165.1| threonyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str.
           F0167]
 gi|330413363|gb|EGG92730.1| threonyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str.
           F0167]
          Length = 651

 Score =  585 bits (1508), Expect = e-165,   Method: Composition-based stats.
 Identities = 231/657 (35%), Positives = 358/657 (54%), Gaps = 20/657 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K+T  DGSIK +    +  D+A+ IS  LA+  VA  +NG   DL D +  +  + +IT
Sbjct: 1   MKITLKDGSIKEYESKKSIIDIAKDISEGLARNVVAGEVNGVKHDLRDEIDSDCELNLIT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D  +L+VIRHS +H++AEAV+ ++PE ++AIGP I +GFYYDFD E PFS ++L ++E
Sbjct: 61  IKDKEALSVIRHSASHVLAEAVKRVFPEAKLAIGPSIAEGFYYDFDHE-PFSREDLDKLE 119

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M++II   +   K  L  E+A +  + K E YKVE+++ +P  E ++ Y+QG++ DLC
Sbjct: 120 AEMKKIIKEGAHIEKFELPREEAIKFMKEKGEPYKVELIQDLPEDEKISFYKQGDFTDLC 179

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH++ T  +K F KL+  + AYWRGDSN+  L RIYGTA+N+++EL  +L  LE+ + 
Sbjct: 180 AGPHLQRTKDIKAF-KLISSSMAYWRGDSNKAKLQRIYGTAYNSKEELEAHLKHLEDIKL 238

Query: 244 RDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEINTPQVL 300
           RDH KL REM+LF      G G+     KG K+ Q L  ++     +   Y    TP + 
Sbjct: 239 RDHNKLGREMELFTTVDVIGQGLPLMLPKGTKMIQKLQRWIEDLEDNEWGYVRTKTPLMA 298

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
              L++ SGHWD Y+  MF +    D   D    AL+PM CP    V+ +  KSYR+LP 
Sbjct: 299 KSDLYKISGHWDHYQDGMFIL---GDPQNDGEILALRPMTCPFQYYVYKNTQKSYRDLPY 355

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+ E  +++RNE SG +HGL RVR FT  + H     +Q   E     NL I +    G 
Sbjct: 356 RMGETSTLFRNEDSGEMHGLTRVRQFTISEGHNVIRPDQAEEELQNCLNLAIYVLDILGL 415

Query: 421 EKIMVKL-----STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
              +             K +G DA W+  +  ++ +L       +  +      GE AFY
Sbjct: 416 RDDVTFRLSKWDKNNKGKYLGDDAYWEGTQAALRNIL------VEKGLPFTEADGEAAFY 469

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +   K+  G++    TIQ+D  +   F+ +Y++    K  P ++HR   G  ER +
Sbjct: 470 GPKIDIQAKNVYGKEDTMITIQLDAAIAENFDLYYIDQSGAKVRPYIVHRTSLGCYERTL 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
             +IE + G  P WL   Q  +  I+    EYA  +   LK + +    D R E I +KI
Sbjct: 530 AWLIEKYAGKFPTWLCAEQVRILPISDKYAEYANIVLKELKKNGVDATVDTRTEKIGFKI 589

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           R+  + ++P +++ G+KE +E S+ +R   +       L D + ++ KE    + +K
Sbjct: 590 RDARLSRLPYMLVVGEKEEAEGSVSVRSRFAGDEGSKKLSDFVDMICKEIRTKEIRK 646


>gi|312984108|ref|ZP_07791455.1| threonine--tRNA ligase [Lactobacillus crispatus CTV-05]
 gi|310894462|gb|EFQ43537.1| threonine--tRNA ligase [Lactobacillus crispatus CTV-05]
          Length = 644

 Score =  585 bits (1508), Expect = e-165,   Method: Composition-based stats.
 Identities = 225/644 (34%), Positives = 353/644 (54%), Gaps = 22/644 (3%)

Query: 6   KLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITP 64
            +T PDGS K+F    +  +VA SI+ SL K AV   +NG V  L   +  +  + I+T 
Sbjct: 4   SITLPDGSEKDFDKAVSVKEVASSIATSLGKAAVGAKVNGVVKPLDYEIDNDVEVAILTD 63

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           +D   L ++R + A  +    ++ +PE+++      E GFY D DK+      EL ++EK
Sbjct: 64  KDEEGLDILRATAAFALEAVAKNKYPELRLGQHVADEGGFYVDTDKDDQIKVTELPELEK 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
            M++++          +   +  ++F+   + YK ++L+ I A   V  Y+ G++ D   
Sbjct: 124 AMEKLVKSGQAIEHVLMDKSELEDIFK--DDPYKTDLLKKIDAD-KVDAYKLGDFVDFGF 180

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
              + +TG++K F KL+ VAGAYW G S+ PML RI+GTA+  +  L + L    E ++R
Sbjct: 181 DALLSNTGKIKHF-KLLSVAGAYWLGKSSNPMLQRIFGTAFFKEAALKEDLKRRAEIKER 239

Query: 245 DHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQ 302
           DHR + R++DLF +      G+ +W  KG  I + +  Y+  R++ D Y+ + TP +++ 
Sbjct: 240 DHRTIGRDLDLFFVDPKVGAGLPYWMPKGATIRRVVERYIIDREVADGYQHVYTPVLMNL 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             ++ SGHW  YR +MF          D     L+PMNCP H+ ++ H ++SYR+LP+R+
Sbjct: 300 DAYKTSGHWAHYRDDMFPPMDMG----DGEMLELRPMNCPSHIQIYKHHIRSYRDLPLRV 355

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AE G ++R E SG+L GL RVR  T +D H F   +Q+  E  KI  LI+ +YKDF    
Sbjct: 356 AELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQVQTEFAKILKLIMDVYKDFDITD 415

Query: 423 IMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
              +LS R  K       +D +W+ ++ ++KG +D +       ++     GE AFYGPK
Sbjct: 416 YYFRLSYRDPKNTDKYFANDEMWERSQKMLKGAMDDLG------LDYVEAEGEAAFYGPK 469

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +   K A+G D    TIQ+DF LP RF   YV    E+  PVMIHR + G++ERFI  +
Sbjct: 470 LDIQTKTALGNDETMSTIQLDFMLPERFGLTYVGQDGEEHRPVMIHRGIVGTMERFIAYL 529

Query: 539 IENFKGNLPLWLSPIQAIVTTI-TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
            E +KG  P WL+PIQA +  +   +  EYA+++   L      +E D RNE + YKIRE
Sbjct: 530 TEIYKGAFPTWLAPIQAEIIPVNNDAHGEYAEKVRQELAKRGFRVEVDNRNEKMGYKIRE 589

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
              +K+P  ++ GD+E    S+ +RR+G+      SL D I  +
Sbjct: 590 SQTQKVPYTLVLGDEEMKNGSVNVRRYGTDEEISKSLTDFINEI 633


>gi|46108732|ref|XP_381424.1| hypothetical protein FG01248.1 [Gibberella zeae PH-1]
          Length = 745

 Score =  585 bits (1508), Expect = e-165,   Method: Composition-based stats.
 Identities = 244/668 (36%), Positives = 365/668 (54%), Gaps = 39/668 (5%)

Query: 3   SDIKLTFPDGSI-KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIE 60
            DI ++ P+G   K      T   VA +IS+SL ++ V   ++G++ DL+ P+ +   +E
Sbjct: 79  EDIVISLPNGKEEKGTSWETTPGAVARNISKSLFERTVISRVDGELWDLTRPLEKSCKVE 138

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIED--GFYYDF--DKEQPFSS 116
            +  +      V  HS AHI+ EA +  +    +  GP  ED  GFYYD     EQ  + 
Sbjct: 139 FLDFDHTEGKKVFWHSSAHILGEAAERRF-GCYLCNGPPTEDPPGFYYDMANMGEQSVTE 197

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
           ++   +E+    I+ +  PF +  ++ E+  E+FE   E  K  I + +P     T+YR 
Sbjct: 198 EDKKALEQLSNSIVKQKQPFERLEMTKEELLEMFEYS-EYKKYFIQQRVPDGTKSTVYRC 256

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           G   DLCRGPHV +TG +K F  L K + AYW GDS    + RI G ++  ++ L +Y +
Sbjct: 257 GPLIDLCRGPHVPTTGNIKAFSVL-KNSAAYWLGDSKNESVQRIAGVSFPDKKALEEYKH 315

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEIN 295
           FL E+ KR+HRK+ ++  LF   E   G  F+   G +I+  L+  ++ + +  D+EE+ 
Sbjct: 316 FLAEAAKRNHRKIGQDQKLFFFDEASPGSAFFLPHGVRIYNALMDLIKGEYQKRDFEEVM 375

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           +P +    LW+ SGHW  Y  NMF  +       +   F LKPMNCPGH  +F H   +Y
Sbjct: 376 SPNMYKADLWKTSGHWGHYEENMFTFEV------EKEKFGLKPMNCPGHCKIFAHSDVTY 429

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           ++LP R+A+FG+++RNE SG+L GL RVR F QDDAH+FCT +Q+  E     + + S+Y
Sbjct: 430 KDLPWRMADFGTLHRNEFSGALSGLTRVRRFQQDDAHIFCTVDQIREEIESAFDFLSSVY 489

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
             FGF   + KLSTRPEK VG  A WD AE  ++  L++    +  +       G+GAFY
Sbjct: 490 GIFGFTFKL-KLSTRPEKYVGDIATWDAAEKKLEEALESFAEKTGAK--WEFNPGDGAFY 546

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC----------------H 519
           GPK +  L DA+ R+ QCGT+Q+DFNLP RF   YV +  E                   
Sbjct: 547 GPKIDIALFDALKREHQCGTMQLDFNLPRRFKLRYVANKGETGVSDGSNPEEDLPAGYAR 606

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH 579
           PVMIHRAV GS ER  GI+ E+F G  P WLSP Q +V  +  +A +YAQE+  + K+  
Sbjct: 607 PVMIHRAVLGSFERMFGILTEHFGGKWPFWLSPRQVLVVPVMPAANDYAQEVQKIFKAKG 666

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK----VSLL 635
           L  + D  + T   KIR+  +++   I + G +E   R++ IR     +TQ     V++ 
Sbjct: 667 LYSDVDLSSNTFQKKIRKGQLEQFNFIFVVGAEEKESRTLNIRNRDDQSTQAKGELVAID 726

Query: 636 DAIPILTK 643
           +A+  L +
Sbjct: 727 EALEKLLQ 734


>gi|259500519|ref|ZP_05743421.1| threonine-tRNA ligase [Lactobacillus iners DSM 13335]
 gi|302191209|ref|ZP_07267463.1| threonyl-tRNA synthetase [Lactobacillus iners AB-1]
 gi|309807138|ref|ZP_07701115.1| threonine--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
 gi|309810241|ref|ZP_07704086.1| threonine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
 gi|259167903|gb|EEW52398.1| threonine-tRNA ligase [Lactobacillus iners DSM 13335]
 gi|308166489|gb|EFO68691.1| threonine--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
 gi|308169513|gb|EFO71561.1| threonine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
          Length = 643

 Score =  585 bits (1508), Expect = e-165,   Method: Composition-based stats.
 Identities = 230/646 (35%), Positives = 362/646 (56%), Gaps = 23/646 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS K F    T  +VA SI+ SLAK AVA  +N ++  L   V  +  + IIT +
Sbjct: 5   ITLPDGSKKEFNHALTIKEVASSIATSLAKSAVAGKVNDEIRPLDFVVDTDARVAIITDK 64

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L V+R++ A +        +P V++    + EDGF+ D DKE    + EL  +EK+
Sbjct: 65  DEEGLQVLRNTAAFVFEMVASKQYPSVRLGTSELEEDGFFVDTDKEDQIKASELPDLEKE 124

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           MQ+I+        + +S  +  +LF+   + YK+E+L+     + V +Y+  ++ D    
Sbjct: 125 MQKIVKNGEKIEYKIVSKSELLDLFK--DDPYKLELLKE--EADEVAVYKLEDFVDFGFN 180

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
             + +TG++K F KL+ VAGAYW+G S+ PML RI+GTA+  + +L   L   E+ ++RD
Sbjct: 181 ALLLNTGKLKHF-KLLSVAGAYWQGKSSNPMLQRIFGTAFFKEADLKADLQRREDIKERD 239

Query: 246 HRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQH 303
           HR + R++DLF +      G+ +W  KG  I + +  Y+  +++ D Y+ + TP +++  
Sbjct: 240 HRTIGRDLDLFFVDPKVGAGLPYWMPKGATIRRVIERYIIDKEVADGYQHVYTPVLMNLD 299

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
            ++ SGHW  YR +MF          D     L+PMNCP H+ ++NH ++SYRELP+R+A
Sbjct: 300 AYKTSGHWAHYREDMFPPMDMG----DGEMLELRPMNCPSHIQIYNHHIRSYRELPIRIA 355

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           E G ++R E SG+L GL RVR  T +D H F   +Q+ +E  KI  LI+ +Y+DF     
Sbjct: 356 ELGMMHRYEKSGALSGLQRVREMTLNDGHTFVELDQVQSEFAKILKLIMEVYRDFDITDY 415

Query: 424 MVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
             +LS R  K       +D +W+ ++ ++KG +D +       +      GE AFYGPK 
Sbjct: 416 YFRLSYRDPKNTDKYFANDEMWERSQKMLKGAMDDLG------LEYVEAEGEAAFYGPKL 469

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +   K A+G D    TIQ+DF LP RFN  YV    E+  PVM+HR + G++ERFI  + 
Sbjct: 470 DIQTKTALGNDETMSTIQLDFMLPERFNLSYVGKDGEEHRPVMVHRGIVGTMERFIAYLT 529

Query: 540 ENFKGNLPLWLSPIQAIVTTI-TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           E +KG  P WL+P+Q  +  +   +  EYAQ + + L       E DFRNE + YKIRE 
Sbjct: 530 EIYKGAFPTWLAPLQVKIIPVNNDAHGEYAQNVKDQLMKLGFRAEVDFRNEKLGYKIREA 589

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
             +K+P  ++ GD E    S+ +R++GS   +  +L + +  L+ +
Sbjct: 590 QTQKVPYTLVLGDDELQHNSVNVRKYGSEDQESKALSEFVSELSAD 635


>gi|45185649|ref|NP_983365.1| ACL039Wp [Ashbya gossypii ATCC 10895]
 gi|44981367|gb|AAS51189.1| ACL039Wp [Ashbya gossypii ATCC 10895]
          Length = 724

 Score =  585 bits (1508), Expect = e-165,   Method: Composition-based stats.
 Identities = 233/652 (35%), Positives = 352/652 (53%), Gaps = 38/652 (5%)

Query: 1   MP-SDIKLTFPDGSIK-NFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR--E 56
           MP + I +   DGS K       +  D+A+ IS+S A +     +NG++ DL  P+   E
Sbjct: 62  MPRAAISVVLKDGSEKPAVAWETSPMDIAQQISKSFADRQCISKVNGELWDLERPLEGSE 121

Query: 57  GS---IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK--- 110
           G    +E    E      V  HS AH++ EA +       + +GP  +DGF+Y+F     
Sbjct: 122 GDHLKLEFFDFESNEGRRVFWHSAAHVLGEACECNL-GAHICLGPPTDDGFFYEFACKDS 180

Query: 111 ------EQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE- 163
                 E+  S  +   +E   ++ I     F +  ++ E   ++       YK  +++ 
Sbjct: 181 MDPDAPERTVSQADFPNLETVAKQAIKEKQRFERLVMTKEDLLKM--FHYSKYKTYLVQT 238

Query: 164 SIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
            IP   + T+YR G+  DLC GPH+  TG++K F KL+K +  Y+ GDS    L R+YG 
Sbjct: 239 KIPDGGSTTVYRSGKLIDLCVGPHIPHTGRIKAF-KLLKNSSCYFLGDSENDTLQRVYGI 297

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYM 283
           A+  ++ +  +L FLEE+ KRDHRK+ RE +LF   E   G  FW   G +I+  L+  +
Sbjct: 298 AFPDKKLMDAHLKFLEEAAKRDHRKIGREQELFMFNEMSPGSCFWLPHGTRIYNNLVELL 357

Query: 284 RRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
           R + +   YEE+ TP + +  LW+ SGHW +Y+ NMF  +       +  +F LKPMNCP
Sbjct: 358 RNEYRKRGYEEVITPNMYNSKLWETSGHWANYKENMFTFEV------EKESFGLKPMNCP 411

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN 402
           GH  +F    +SYRELP R+A+FG ++RNE SG+L GL RVR F QDDAH+FC ++Q+  
Sbjct: 412 GHCVMFKSRERSYRELPWRVADFGVIHRNEFSGALSGLTRVRRFQQDDAHIFCAQDQIET 471

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
           E   + + +  +Y  FGFE  + +LSTRPE  VG    W++AE  ++  L+      +  
Sbjct: 472 EIEGLFDFLKYVYGVFGFEFKL-ELSTRPENYVGDLETWNNAEARLESALN------KWG 524

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV---NSHSEKCH 519
            +  +  G+GAFYGPK + ++ DA+ R  QC TIQ+DF LP+RF   Y    N  +    
Sbjct: 525 GDWEINEGDGAFYGPKIDIMISDALKRWHQCATIQLDFQLPNRFELEYKGKGNDENAYER 584

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH 579
           PVMIHRA+ GS+ER   I+ E++ G  P WLSP Q +V  +     +YAQ+I + L    
Sbjct: 585 PVMIHRALLGSVERMTAILTEHYAGKWPFWLSPRQVLVVPVGVKYQDYAQQIRDKLVGAG 644

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
              + D  + T+  K+R   + K   I + G++E +E S+ IR    T  Q 
Sbjct: 645 FYADADLGSNTLQKKVRTGQMLKYNFIFVVGEQEMNENSVNIRNRDVTDLQG 696


>gi|309803316|ref|ZP_07697413.1| threonine--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
 gi|308164824|gb|EFO67074.1| threonine--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
          Length = 643

 Score =  585 bits (1508), Expect = e-165,   Method: Composition-based stats.
 Identities = 229/646 (35%), Positives = 361/646 (55%), Gaps = 23/646 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS K F    T  +VA SI+ SLAK AVA  +N ++  L   V  +  + IIT +
Sbjct: 5   ITLPDGSKKEFNHALTIKEVASSIATSLAKSAVAGKVNDEIRPLDFVVDTDARVAIITDK 64

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L V+R++ A +        +P V++    + EDGF+ D DKE    + EL  +EK+
Sbjct: 65  DEEGLQVLRNTAAFVFEMVASKQYPSVRLGTSELEEDGFFVDTDKEDQIKASELPDLEKE 124

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           MQ+ +        + +S  +  +LF+   + YK+E+L+     + V +Y+  ++ D    
Sbjct: 125 MQKKVKNGEKIEYKIVSKSELLDLFK--DDPYKLELLKE--EADEVAVYKLEDFVDFGFN 180

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
             + +TG++K F KL+ VAGAYW+G S+ PML RI+GTA+  + +L   L   E+ ++RD
Sbjct: 181 ALLLNTGKLKHF-KLLSVAGAYWQGKSSNPMLQRIFGTAFFKEADLKADLQRREDIKERD 239

Query: 246 HRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQH 303
           HR + R++DLF +      G+ +W  KG  I + +  Y+  +++ D Y+ + TP +++  
Sbjct: 240 HRTIGRDLDLFFVDPKVGAGLPYWMPKGATIRRVIERYIIDKEVADGYQHVYTPVLMNLD 299

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
            ++ SGHW  YR +MF          D     L+PMNCP H+ ++NH ++SYRELP+R+A
Sbjct: 300 AYKTSGHWAHYREDMFPPMDMG----DGEMLELRPMNCPSHIQIYNHHIRSYRELPIRIA 355

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           E G ++R E SG+L GL RVR  T +D H F   +Q+ +E  KI  LI+ +Y+DF     
Sbjct: 356 ELGMMHRYEKSGALSGLQRVREMTLNDGHTFVELDQVQSEFAKILKLIMEVYRDFDITDY 415

Query: 424 MVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
             +LS R  K       +D +W+ ++ ++KG +D +       +      GE AFYGPK 
Sbjct: 416 YFRLSYRDPKNTDKYFANDEMWERSQKMLKGAMDDLG------LEYVEAEGEAAFYGPKL 469

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +   K A+G D    TIQ+DF LP RFN  YV    E+  PVM+HR + G++ERFI  + 
Sbjct: 470 DIQTKTALGNDETMSTIQLDFMLPERFNLSYVGKDGEEHRPVMVHRGIVGTMERFIAYLT 529

Query: 540 ENFKGNLPLWLSPIQAIVTTI-TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           E +KG  P WL+P+Q  +  +   +  EYAQ + + L       E DFRNE + YKIRE 
Sbjct: 530 EIYKGAFPTWLAPLQVKIIPVNNDAHGEYAQNVKDQLMKLGFRAEVDFRNEKLGYKIREA 589

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
             +K+P  ++ GD E    S+ +R++GS   +  +L + +  L+ +
Sbjct: 590 QTQKVPYTLVLGDDELQHNSVNVRKYGSEDQESKALSEFVSELSAD 635


>gi|312871712|ref|ZP_07731800.1| threonine--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
 gi|312872982|ref|ZP_07733042.1| threonine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
 gi|312874225|ref|ZP_07734259.1| threonine--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
 gi|315653646|ref|ZP_07906566.1| threonine--tRNA ligase [Lactobacillus iners ATCC 55195]
 gi|325912186|ref|ZP_08174584.1| threonine--tRNA ligase [Lactobacillus iners UPII 143-D]
 gi|329920107|ref|ZP_08276938.1| threonine--tRNA ligase [Lactobacillus iners SPIN 1401G]
 gi|311090295|gb|EFQ48705.1| threonine--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
 gi|311091504|gb|EFQ49888.1| threonine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
 gi|311092654|gb|EFQ51010.1| threonine--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
 gi|315489008|gb|EFU78650.1| threonine--tRNA ligase [Lactobacillus iners ATCC 55195]
 gi|325476136|gb|EGC79304.1| threonine--tRNA ligase [Lactobacillus iners UPII 143-D]
 gi|328936561|gb|EGG33005.1| threonine--tRNA ligase [Lactobacillus iners SPIN 1401G]
          Length = 643

 Score =  585 bits (1508), Expect = e-165,   Method: Composition-based stats.
 Identities = 230/646 (35%), Positives = 362/646 (56%), Gaps = 23/646 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS K F    T  +VA SI+ SLAK AVA  +N ++  L   V  +  + IIT +
Sbjct: 5   ITLPDGSKKEFNHALTIKEVASSIATSLAKSAVAGKVNDEIRPLDFVVDTDARVAIITDK 64

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L V+R++ A +        +P V++    + EDGF+ D DKE    + EL  +EK+
Sbjct: 65  DEEGLQVLRNTAAFVFEMVASKQYPSVRLGTSELEEDGFFVDTDKEDQIKASELPDLEKE 124

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           MQ+I+        + +S  +  +LF+   + YK+E+L+     + V +Y+  ++ D    
Sbjct: 125 MQKIVKNGEKIEYKIVSKSELLDLFK--DDPYKLELLKE--EADEVAVYKLEDFVDFGFN 180

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
             + +TG++K F KL+ VAGAYW+G S+ PML RI+GTA+  + +L   L   E+ ++RD
Sbjct: 181 ALLMNTGKLKHF-KLLSVAGAYWQGKSSNPMLQRIFGTAFFKEADLKADLQRREDIKERD 239

Query: 246 HRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQH 303
           HR + R++DLF +      G+ +W  KG  I + +  Y+  +++ D Y+ + TP +++  
Sbjct: 240 HRTIGRDLDLFFVDPKVGAGLPYWMPKGATIRRVIERYIIDKEVADGYQHVYTPVLMNLD 299

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
            ++ SGHW  YR +MF          D     L+PMNCP H+ ++NH ++SYRELP+R+A
Sbjct: 300 AYKTSGHWAHYREDMFPPMDMG----DGEMLELRPMNCPSHIQIYNHHIRSYRELPIRIA 355

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           E G ++R E SG+L GL RVR  T +D H F   +Q+ +E  KI  LI+ +Y+DF     
Sbjct: 356 ELGMMHRYEKSGALSGLQRVREMTLNDGHTFVELDQVQSEFAKILKLIMEVYRDFDITDY 415

Query: 424 MVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
             +LS R  K       +D +W+ ++ ++KG +D +       +      GE AFYGPK 
Sbjct: 416 YFRLSYRDPKNTDKYFANDEMWERSQKMLKGAMDDLG------LEYVEAEGEAAFYGPKL 469

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +   K A+G D    TIQ+DF LP RFN  YV    E+  PVM+HR + G++ERFI  + 
Sbjct: 470 DIQTKTALGNDETMSTIQLDFMLPERFNLSYVGKDGEEHRPVMVHRGIVGTMERFIAYLT 529

Query: 540 ENFKGNLPLWLSPIQAIVTTI-TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           E +KG  P WL+P+Q  +  +   +  EYAQ + + L       E DFRNE + YKIRE 
Sbjct: 530 EIYKGAFPTWLAPLQVKIIPVNNDAHGEYAQNVKDQLMKLGFRAEVDFRNEKLGYKIREA 589

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
             +K+P  ++ GD E    S+ +R++GS   +  +L + +  L+ +
Sbjct: 590 QTQKVPYTLVLGDDELQHNSVNVRKYGSEDQESKALSEFVSELSAD 635


>gi|312875562|ref|ZP_07735563.1| threonine--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
 gi|311088816|gb|EFQ47259.1| threonine--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
          Length = 643

 Score =  585 bits (1507), Expect = e-165,   Method: Composition-based stats.
 Identities = 230/646 (35%), Positives = 361/646 (55%), Gaps = 23/646 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS K F    T  +VA SI+ SLAK AVA  +N ++  L   V  +  + IIT +
Sbjct: 5   ITLPDGSKKEFNHALTIKEVASSIATSLAKSAVAGKVNDEIRPLDFVVDTDARVAIITDK 64

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L V+R++ A +        +P V++    + EDGF+ D DKE    + EL  +EK+
Sbjct: 65  DEEGLQVLRNTAAFVFEMVASKQYPSVRLGTSELEEDGFFVDTDKEDQIKASELPDLEKE 124

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           MQ+I+        + +S  +  +LF+   + YK+E+L+     + V +Y+  ++ D    
Sbjct: 125 MQKIVKNGEKIEYKIVSKSELLDLFK--DDPYKLELLKE--EADEVAVYKLEDFVDFGFN 180

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
             + +TG++K F KL+ VAGAYW+G S+ PML RI+GTA+    +L   L   E+ ++RD
Sbjct: 181 ALLMNTGKLKHF-KLLSVAGAYWQGKSSNPMLQRIFGTAFFKDADLKADLQRREDIKERD 239

Query: 246 HRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQH 303
           HR + R++DLF +      G+ +W  KG  I + +  Y+  +++ D Y+ + TP +++  
Sbjct: 240 HRTIGRDLDLFFVDPKVGAGLPYWMPKGATIRRVIERYIIDKEVADGYQHVYTPVLMNLD 299

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
            ++ SGHW  YR +MF          D     L+PMNCP H+ ++NH ++SYRELP+R+A
Sbjct: 300 AYKTSGHWAHYREDMFPPMDMG----DGEMLELRPMNCPSHIQIYNHHIRSYRELPIRIA 355

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           E G ++R E SG+L GL RVR  T +D H F   +Q+ +E  KI  LI+ +Y+DF     
Sbjct: 356 ELGMMHRYEKSGALSGLQRVREMTLNDGHTFVELDQVQSEFAKILKLIMEVYRDFDITDY 415

Query: 424 MVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
             +LS R  K       +D +W+ ++ ++KG +D +       +      GE AFYGPK 
Sbjct: 416 YFRLSYRDPKNTDKYFANDEMWERSQKMLKGAMDDLG------LEYVEAEGEAAFYGPKL 469

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +   K A+G D    TIQ+DF LP RFN  YV    E+  PVM+HR + G++ERFI  + 
Sbjct: 470 DIQTKTALGNDETMSTIQLDFMLPERFNLSYVGKDGEEHRPVMVHRGIVGTMERFIAYLT 529

Query: 540 ENFKGNLPLWLSPIQAIVTTI-TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           E +KG  P WL+P+Q  +  +   +  EYAQ + + L       E DFRNE + YKIRE 
Sbjct: 530 EIYKGAFPTWLAPLQVKIIPVNNDAHGEYAQNVKDQLMKLGFRAEVDFRNEKLGYKIREA 589

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
             +K+P  ++ GD E    S+ +R++GS   +  +L + +  L+ +
Sbjct: 590 QTQKVPYTLVLGDDELQHNSVNVRKYGSEDQESKALSEFVSELSAD 635


>gi|297205704|ref|ZP_06923099.1| threonine--tRNA ligase [Lactobacillus jensenii JV-V16]
 gi|297148830|gb|EFH29128.1| threonine--tRNA ligase [Lactobacillus jensenii JV-V16]
          Length = 656

 Score =  585 bits (1507), Expect = e-165,   Method: Composition-based stats.
 Identities = 228/647 (35%), Positives = 361/647 (55%), Gaps = 23/647 (3%)

Query: 6   KLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITP 64
            +T PDGS KNF    +  D+A+ IS SL K AVA  ++G+V  ++  +  +  + I+T 
Sbjct: 17  SITLPDGSKKNFDQAVSVLDLAKGISTSLGKAAVAAKVDGEVKPVNFMLEKDSEVAILTD 76

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           +D   LAV+R + A ++  A Q+ +PE+++      EDGF+ D DKE      EL ++EK
Sbjct: 77  KDEAGLAVLRDTVAFLLEAAAQAKYPELRLGEHEANEDGFFVDTDKEDQIKITELPELEK 136

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
            + ++I          +   +     E K + +K+E+L+S    + V  ++ G++ D   
Sbjct: 137 AIVKLIKNGQAIEPVMVKKSELEA--EFKNDPFKMELLKS--EGDEVAAFKMGDFVDFGF 192

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
              + ++G+VK F KL+ VAGAYW+G S+ PML R++GTA+  + +L   L    E ++R
Sbjct: 193 KALLPNSGKVKHF-KLLSVAGAYWQGKSSNPMLQRLFGTAFFKETDLEADLKRRAEIKER 251

Query: 245 DHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQ 302
           DHR + R++DLF +      G+ +W  KG  I + +  Y+  +++ D Y+ + TP +++ 
Sbjct: 252 DHRTIGRDLDLFFVDPKVGAGLPYWMPKGATIRRVIERYIIDKELADGYQHVYTPVLMNL 311

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             ++ SGHW  YR +MF          D     L+PMNCP H+ V+ H ++SYRELP+R+
Sbjct: 312 DAYKTSGHWAHYREDMFPPMDMG----DGEMLELRPMNCPSHIQVYKHHIRSYRELPIRI 367

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AE G ++R E SG+L GL RVR  T +D H F   EQ+  E  KI  LI+ +YKDF    
Sbjct: 368 AELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALEQVQEEFAKILKLIMDVYKDFDITD 427

Query: 423 IMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
              +LS R  K       +D +W+ ++ ++KG +D +       ++     GE AFYGPK
Sbjct: 428 YYFRLSYRDPKNTDKYFANDEMWERSQKMLKGAMDDLG------LDYVEAEGEAAFYGPK 481

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +   K A+G D    TIQ+DF LP RF+  YV    E+  PVMIHR + G++ERFI  +
Sbjct: 482 LDIQTKTALGNDETMSTIQLDFMLPERFDLSYVGQDGEEHRPVMIHRGIVGTMERFIAYL 541

Query: 539 IENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
            E +KG  P WL+P Q  +  +   +  EYA+++ + L  H    E DFRNE + YKIRE
Sbjct: 542 TEIYKGAFPTWLAPEQVEIIPVNLDAHGEYAKKVRDELLKHGFRAEVDFRNEKMGYKIRE 601

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
              +K+P  ++ GD E +  ++ +R +G+   + +SL   I  L  +
Sbjct: 602 SQTQKVPYTLVLGDDEMNSNAVNVRPYGTEKQESMSLDKFIDELQAD 648


>gi|238855713|ref|ZP_04646009.1| threonine--tRNA ligase [Lactobacillus jensenii 269-3]
 gi|260665499|ref|ZP_05866346.1| threonyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
 gi|282934764|ref|ZP_06340004.1| threonine--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|313471817|ref|ZP_07812309.1| threonine--tRNA ligase [Lactobacillus jensenii 1153]
 gi|238831659|gb|EEQ24000.1| threonine--tRNA ligase [Lactobacillus jensenii 269-3]
 gi|239528573|gb|EEQ67574.1| threonine--tRNA ligase [Lactobacillus jensenii 1153]
 gi|260560767|gb|EEX26744.1| threonyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
 gi|281301175|gb|EFA93479.1| threonine--tRNA ligase [Lactobacillus jensenii 208-1]
          Length = 643

 Score =  585 bits (1507), Expect = e-164,   Method: Composition-based stats.
 Identities = 226/647 (34%), Positives = 361/647 (55%), Gaps = 23/647 (3%)

Query: 6   KLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITP 64
            +T PDGS K+F    +  D+A+ IS SL K AVA  ++G+V  ++  +  +  + I+T 
Sbjct: 4   SITLPDGSKKDFDQAVSVLDLAKGISTSLGKAAVAAKVDGEVKSVNFMLEKDSEVAILTD 63

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           +D   LAV+R + A ++  A Q+ +PE+++      EDGF+ D DKE      EL ++EK
Sbjct: 64  KDEAGLAVLRDTVAFLLEAAAQAKYPELRLGEHEANEDGFFVDTDKEDQIKVTELPELEK 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
            + ++I          +   +     + K + +K+E+L+S    + V  ++ G++ D   
Sbjct: 124 AIAKLIKNGQAIEPVMVKKSELEA--QFKNDPFKMELLKS--EGDEVAAFKMGDFVDFGF 179

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
              + ++G+VK F KL+ VAGAYW+G S+ PML R++GTA+  + +L   L    E ++R
Sbjct: 180 AALLPNSGKVKHF-KLLSVAGAYWQGKSSNPMLQRLFGTAFFKEADLEADLKRRAEIKER 238

Query: 245 DHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQ 302
           DHR + R++DLF +      G+ +W  KG  I + +  Y+  +++ D Y+ + TP +++ 
Sbjct: 239 DHRTIGRDLDLFFVDPKVGAGLPYWMPKGATIRRVIERYIIDKELADGYQHVYTPVLMNL 298

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             ++ SGHW  YR +MF          D     L+PMNCP H+ V+ H ++SYRELP+R+
Sbjct: 299 DAYKTSGHWAHYREDMFPPMDMG----DGEMLELRPMNCPSHIQVYKHHIRSYRELPIRI 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AE G ++R E SG+L GL RVR  T +D H F   EQ+  E  KI  LI+ +YKDF    
Sbjct: 355 AELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALEQVQEEFAKILKLIMDVYKDFDITD 414

Query: 423 IMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
              +LS R  K       +D +W+ ++ ++KG +D +       ++     GE AFYGPK
Sbjct: 415 YYFRLSYRDPKNTDKYFANDEMWERSQKMLKGAMDDLG------LDYVEAEGEAAFYGPK 468

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +   K A+G D    TIQ+DF LP RF+  YV    E+  PVMIHR + G++ERFI  +
Sbjct: 469 LDIQTKTALGNDETMSTIQLDFMLPERFDLSYVGQDGEEHRPVMIHRGIVGTMERFIAYL 528

Query: 539 IENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
            E +KG  P WL+P Q  +  +   +  EYA+++ + L  H    E DFRNE + YKIRE
Sbjct: 529 TEIYKGAFPTWLAPEQVEIIPVNLDAHGEYAKKVRDELLKHGFRAEVDFRNEKMGYKIRE 588

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
              +K+P  ++ GD E +  ++ +R +G+   + +SL   I  L  +
Sbjct: 589 SQTQKVPYTLVLGDDEMNSNAVNVRPYGTEKQESMSLDQFINELQAD 635


>gi|81429010|ref|YP_396010.1| threonyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
 gi|123742216|sp|Q38VT0|SYT_LACSS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|78610652|emb|CAI55703.1| Threonyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
          Length = 656

 Score =  585 bits (1507), Expect = e-164,   Method: Composition-based stats.
 Identities = 236/652 (36%), Positives = 367/652 (56%), Gaps = 24/652 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
           ++I+LTFPDG+ K F    +  DVA+SIS SLAKKA+A   NG+V DL  P+  +G+IEI
Sbjct: 2   AEIQLTFPDGAQKTFEQATSLLDVAKSISTSLAKKAIAGKFNGEVVDLQQPLLEDGAIEI 61

Query: 62  ITPEDPR-SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDEL 119
           IT +D   +L    H+ A ++A  +   +PE+Q       EDGFYYD D E    +  +L
Sbjct: 62  ITKDDQAVNLTATWHTAAFVLAATLSQHYPEMQFGEVTATEDGFYYDTDNEAGQVAVTDL 121

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +I+ +M ++I       +  +S + A++L     + YK+ +L+ + A + V +Y+ G++
Sbjct: 122 PEIKTEMAKLIQSGEAISRVSVSKDDAKKL--FAGQTYKLALLDEVEADQ-VLVYQLGDY 178

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            D    P +     VK FF+L+ VAGAYW+G S+  ML RIYGTA+  Q+EL   L   +
Sbjct: 179 SDFSLAPMLGKVSDVK-FFELLSVAGAYWQGKSSNQMLQRIYGTAYPKQEELDADLKRRQ 237

Query: 240 ESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTP 297
           E+++RDHR +  ++DLF +      G+ +W   G  I +++  Y+  +++ + YE + TP
Sbjct: 238 EAKERDHRVIGNQLDLFFVDPKVGAGLPYWLPNGATIRRSIERYIIDKEVANGYEHVYTP 297

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  L++QSGHWD YR +MF          D     L+PMNCP H+ V+ H  +SYRE
Sbjct: 298 ILANLDLYKQSGHWDHYREDMFPPMDMG----DGEMLELRPMNCPSHIQVYKHHPRSYRE 353

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E   I  L+I +Y D
Sbjct: 354 LPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIQDEFKSILGLMIDVYAD 413

Query: 418 FGFEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           F       +LS R      K    D +W+ A+ ++KG +D +       ++     GE A
Sbjct: 414 FNINDYTFRLSYRDPANTEKYFDDDEMWNKAQAMLKGAMDDLG------LDYVEAEGEAA 467

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +   K A+G +    TIQ+DF LP RF+  YV    E   PVMIHR +  ++ER
Sbjct: 468 FYGPKLDVQTKTAMGNEETLSTIQLDFMLPERFDLHYVGEDGEMHRPVMIHRGLVSTMER 527

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETIN 592
           F   + E +KG  P WL+P QA++  + +    +YA+ I + +    L +  D RNE + 
Sbjct: 528 FTAYLTEIYKGAFPTWLAPTQAVIIPVKNDLHYDYAKNIKDEMIKRGLRVRIDDRNEKMG 587

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           YKIRE    KIP  ++ GD+E ++ ++ +R++G     + +    I  +  E
Sbjct: 588 YKIREAQTSKIPYTLVVGDQELAQATVSVRKYGEENAVEEASDMFINAIVAE 639


>gi|295693387|ref|YP_003601997.1| threonyl-tRNA synthetase [Lactobacillus crispatus ST1]
 gi|295031493|emb|CBL50972.1| Threonyl-tRNA synthetase [Lactobacillus crispatus ST1]
          Length = 645

 Score =  584 bits (1506), Expect = e-164,   Method: Composition-based stats.
 Identities = 221/644 (34%), Positives = 348/644 (54%), Gaps = 22/644 (3%)

Query: 6   KLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITP 64
            +T PDGS K+F    +  +VA SI+ SL K AV   +NG V  L   +     + I+T 
Sbjct: 4   SITLPDGSKKDFDKAVSVKEVASSIATSLGKAAVGAKVNGVVKPLDYEIDNNVEVAILTD 63

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           +D   L ++R + A  +    ++ +PE+++      E GFY D DK+      EL ++EK
Sbjct: 64  KDEEGLDILRATAAFALEAVAKNKYPELRLGQHVADEGGFYVDTDKDDQIKVTELPELEK 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
            M+++I          +   +  ++F+   + YK ++L+ I   + V  Y+ G++ D   
Sbjct: 124 AMEKLIKSGQAIEDVVMDKSELEDIFK--DDPYKSDLLKEI-DSDKVDAYKLGDFVDFGF 180

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
              + +TG++K F KL+ VAGAYW G S+ PML RI+GTA+  +  L + L    E ++R
Sbjct: 181 DALLPNTGKIKHF-KLLSVAGAYWLGKSSNPMLQRIFGTAFFKEAALKEDLKRRAEIKER 239

Query: 245 DHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQ 302
           DHR + R++DLF +      G+ +W  KG  I + +  Y+  R++ D Y+ + TP +++ 
Sbjct: 240 DHRTIGRDLDLFFVDPKVGAGLPYWMPKGATIRRVVERYIIDREVADGYQHVYTPVLMNL 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             ++ SGHW  YR +MF          D     L+PMNCP H+ ++ H ++SYR+LP+R+
Sbjct: 300 DAYKTSGHWAHYRDDMFPPMDMG----DGEMLELRPMNCPSHIQIYKHHIRSYRDLPLRV 355

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AE G ++R E SG+L GL RVR  T +D H F   +Q+  E  KI  LI+ +YKDF    
Sbjct: 356 AELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQVQTEFAKILKLIMDVYKDFDITD 415

Query: 423 IMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
              +LS R  K       +D +W+ ++ ++KG +D +       ++     GE AFYGPK
Sbjct: 416 YYFRLSYRDPKNTDKYFANDEMWERSQKMLKGAMDDLG------LDYVEAEGEAAFYGPK 469

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +   K A+G D    TIQ+DF LP RF   YV    E+  PVMIHR + G++ERFI  +
Sbjct: 470 LDIQTKTALGNDETMSTIQLDFMLPERFGLTYVGQDGEEHRPVMIHRGIVGTMERFIAYL 529

Query: 539 IENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
            E +KG  P WL+P+Q  +  +   +  EYA+++   L       E D RNE + YKIRE
Sbjct: 530 TEIYKGAFPTWLAPVQVEIIPVNLDAHGEYAEKVRQELAKRGFRAEVDTRNEKMGYKIRE 589

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
              +K+P  ++ GD E     + +R +G+     +SL D I  +
Sbjct: 590 SQTQKVPYTLVLGDDEMKANGVNVRPYGTDQENSMSLDDFIKEI 633


>gi|50310653|ref|XP_455348.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49644484|emb|CAG98056.1| KLLA0F05918p [Kluyveromyces lactis]
          Length = 744

 Score =  584 bits (1506), Expect = e-164,   Method: Composition-based stats.
 Identities = 238/663 (35%), Positives = 355/663 (53%), Gaps = 40/663 (6%)

Query: 5   IKLTFPDGSIKN-FPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-----EGS 58
           + +   DGS K       +  D+A+ IS+S +++     +NG++ DL  P+      E  
Sbjct: 86  LTVVLKDGSTKEATAWETSPMDIAQQISKSFSERQCISKVNGELWDLERPLEGNEGDELK 145

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-------- 110
           +E    E      V  HS AH++ EA +       + +GP  +DGF+Y+F          
Sbjct: 146 VEFFDFESDTGKKVFWHSSAHVLGEACECNL-GAHICLGPPTDDGFFYEFACRDSMDADS 204

Query: 111 -EQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKE 169
            E+  S  +   +E   + +I +   F +  +S E   ++F   K      +   IP   
Sbjct: 205 PERTVSQADFPNLESVSKNVIKQKQRFERLVMSKENLLKMFHYSKYKT-YLVSTKIPDGG 263

Query: 170 NVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQ 229
             T+YR G   DLC GPH+  TG++K F KL+K +  Y+ GD+N   L RIYG ++  ++
Sbjct: 264 ATTVYRCGSLIDLCTGPHIPHTGRIKAF-KLLKNSSCYFLGDNNNDSLQRIYGISFPDKK 322

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK- 288
            +  +L FL E+  RDHRK+ RE +LF+  E   G  FW   G +I+ TL+  +R + + 
Sbjct: 323 LMDAHLKFLAEASMRDHRKIGREQELFYFNEMSPGSCFWLPHGTRIYNTLVDLLRSEYRK 382

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
             Y+E+ TP + +  LW+ SGHW +Y+ NMF+ +       +  TF LKPMNCPGH  +F
Sbjct: 383 RGYDEVITPNMYNSKLWETSGHWANYKENMFSFEV------EKETFGLKPMNCPGHCLMF 436

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
               +SYRELP R+A+FG ++RNE SG+L GL RVR F QDDAH+FCT++Q+ NE   I 
Sbjct: 437 KARERSYRELPWRVADFGVIHRNEFSGALSGLTRVRRFQQDDAHIFCTQDQIENEIANIF 496

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
           + +  +Y  FGFE  M +LSTRPEK VG    W++AE+ ++  L       +   N  + 
Sbjct: 497 DFLKYVYGVFGFEFKM-ELSTRPEKYVGELETWNNAESKLETALK------KWGGNWELN 549

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK----CHPVMIH 524
            G+GAFYGPK + ++ DA+ R  QC TIQ+DF LP+RF   +     E       PVMIH
Sbjct: 550 PGDGAFYGPKIDIMISDALKRWHQCATIQLDFQLPNRFELEFKTKELEGSDNYERPVMIH 609

Query: 525 RAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIET 584
           RA+ GS+ER   I+ E+F G  P WLSP Q +V  +     EYAQE+ + +       + 
Sbjct: 610 RAILGSVERMTAILTEHFAGKWPFWLSPRQILVVPVGVKFQEYAQEVRDKMVEAGFYADV 669

Query: 585 DFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ----KVSLLDAIPI 640
           D    T+  K+R   + K   I I G++E +E+S+ IR       Q     V +   I  
Sbjct: 670 DLTGNTLQKKVRNGQMLKYNFIFIVGEQEMTEKSVNIRNRDVMDLQGKNATVQVDAVINQ 729

Query: 641 LTK 643
           L+K
Sbjct: 730 LSK 732


>gi|50294994|ref|XP_449908.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49529222|emb|CAG62888.1| unnamed protein product [Candida glabrata]
          Length = 726

 Score =  584 bits (1506), Expect = e-164,   Method: Composition-based stats.
 Identities = 237/670 (35%), Positives = 352/670 (52%), Gaps = 43/670 (6%)

Query: 1   MPS-DIKLTFPDGSIKN-FPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR--- 55
           MP   I +   DG+ K       T  D+A  IS+SLA +     +NG + DL  P     
Sbjct: 61  MPRVPITIVLKDGAKKEATAWETTPMDIARGISKSLADRLCIAKVNGDLWDLERPFEGKE 120

Query: 56  --EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK--- 110
             E  +E+   E      V  HS AH++ EA +       + +GP  +DGF+Y+      
Sbjct: 121 NEEIKLELFDFESDEGRRVFWHSSAHVLGEACECNL-GAHICLGPPTDDGFFYEMALKDT 179

Query: 111 --------EQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL 162
                   E+  S  +   +E   + +I     F +  +S E   ++F   K      + 
Sbjct: 180 LKEDKDAEERTISQADFPNLEGVAKNVIKEKQKFERLVMSKEDLLKMFHYSKFKT-YLVQ 238

Query: 163 ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYG 222
             IP   + T+Y+ G+  DLC GPH+  TG++K F KL+K + +Y+ GD+N   L R+YG
Sbjct: 239 TKIPDGGSTTVYKCGKLIDLCVGPHIPHTGRIKAF-KLLKNSSSYFLGDANNESLQRVYG 297

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISY 282
            ++  ++ +  +L FL E+  RDHRK+ +E +LF   E   G  FW   G +I+ TL+  
Sbjct: 298 ISFPDKKLMDAHLKFLAEASMRDHRKIGKEQELFLFNEMSPGSCFWLPHGTRIYNTLVDL 357

Query: 283 MRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           +R + +   YEE+ TP + +  LW+ SGHW +Y+ NMF  +       +  TF LKPMNC
Sbjct: 358 LRSEYRKRGYEEVITPNMYNSKLWETSGHWANYKENMFTFEV------EKETFGLKPMNC 411

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
           PGH  +F    +SYRELP R+A+FG ++RNE SG+L GL RVR F QDDAH+FCT++Q+ 
Sbjct: 412 PGHCLMFKARERSYRELPWRVADFGVIHRNEFSGALSGLTRVRRFQQDDAHIFCTQDQIE 471

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E   I + +  +Y  FGFE  M +LSTRPEK VG    WD AE  ++  L+    + + 
Sbjct: 472 QEIENIFDFLKFMYGVFGFEFKM-ELSTRPEKYVGELETWDAAEKKLENALNKWGGAWE- 529

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK---- 517
                +  G+GAFYGPK + ++ DA+ R  QC TIQ+DF LP RF   +    +E+    
Sbjct: 530 -----LNPGDGAFYGPKIDIMISDALRRWHQCATIQLDFQLPQRFELEFKAKDTEESENY 584

Query: 518 CHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKS 577
             PVMIHRA+ GS+ER   I+ E+F G  P WLSP Q +V  +     EYAQ++ + + +
Sbjct: 585 ERPVMIHRAILGSVERMTAILTEHFAGKWPFWLSPRQILVVPVGVKYQEYAQQVRDKMHN 644

Query: 578 HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ----KVS 633
                + D    T+  K+R   + K   I I G+ E +E S+ IR       Q     V+
Sbjct: 645 AGFYADVDLTGNTLQKKVRTGQLMKYNFIFIVGETEMNENSVNIRNRDVMEQQGKNATVN 704

Query: 634 LLDAIPILTK 643
           +   +  L K
Sbjct: 705 VDIVLEQLQK 714


>gi|256850831|ref|ZP_05556220.1| threonyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260661042|ref|ZP_05861956.1| threonyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
 gi|256615893|gb|EEU21081.1| threonyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260547979|gb|EEX23955.1| threonyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
          Length = 643

 Score =  584 bits (1505), Expect = e-164,   Method: Composition-based stats.
 Identities = 228/647 (35%), Positives = 361/647 (55%), Gaps = 23/647 (3%)

Query: 6   KLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITP 64
            +T PDGS KNF    +  D+A+ IS SL K AVA  ++G+V  ++  +  +  + I+T 
Sbjct: 4   SITLPDGSKKNFDQAVSVLDLAKGISTSLGKAAVAAKVDGEVKPVNFMLEKDSEVAILTD 63

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           +D   LAV+R + A ++  A Q+ +PE+++      EDGF+ D DKE      EL ++EK
Sbjct: 64  KDEAGLAVLRDTVAFLLEAAAQAKYPELRLGEHEANEDGFFVDTDKEDQIKITELPELEK 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
            + ++I          +   +     E K + +K+E+L+S    + V  ++ G++ D   
Sbjct: 124 AIVKLIKNGQAIEPVMVKKSELEA--EFKNDPFKMELLKS--EGDEVAAFKMGDFVDFGF 179

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
              + ++G+VK F KL+ VAGAYW+G S+ PML R++GTA+  + +L   L    E ++R
Sbjct: 180 KALLPNSGKVKHF-KLLSVAGAYWQGKSSNPMLQRLFGTAFFKETDLEADLKRRAEIKER 238

Query: 245 DHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQ 302
           DHR + R++DLF +      G+ +W  KG  I + +  Y+  +++ D Y+ + TP +++ 
Sbjct: 239 DHRTIGRDLDLFFVDPKVGAGLPYWMPKGATIRRVIERYIIDKELADGYQHVYTPVLMNL 298

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             ++ SGHW  YR +MF          D     L+PMNCP H+ V+ H ++SYRELP+R+
Sbjct: 299 DAYKTSGHWAHYREDMFPPMDMG----DGEMLELRPMNCPSHIQVYKHHIRSYRELPIRI 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AE G ++R E SG+L GL RVR  T +D H F   EQ+  E  KI  LI+ +YKDF    
Sbjct: 355 AELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALEQVQEEFAKILKLIMDVYKDFDITD 414

Query: 423 IMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
              +LS R  K       +D +W+ ++ ++KG +D +       ++     GE AFYGPK
Sbjct: 415 YYFRLSYRDPKNTDKYFANDEMWERSQKMLKGAMDDLG------LDYVEAEGEAAFYGPK 468

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +   K A+G D    TIQ+DF LP RF+  YV    E+  PVMIHR + G++ERFI  +
Sbjct: 469 LDIQTKTALGNDETMSTIQLDFMLPERFDLSYVGQDGEEHRPVMIHRGIVGTMERFIAYL 528

Query: 539 IENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
            E +KG  P WL+P Q  +  +   +  EYA+++ + L  H    E DFRNE + YKIRE
Sbjct: 529 TEIYKGAFPTWLAPEQVEIIPVNLDAHGEYAKKVRDELLKHGFRAEVDFRNEKMGYKIRE 588

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
              +K+P  ++ GD E +  ++ +R +G+   + +SL   I  L  +
Sbjct: 589 SQTQKVPYTLVLGDDEMNSNAVNVRPYGTEKQESMSLDKFIDELQAD 635


>gi|301089746|ref|XP_002895146.1| threonyl-tRNA synthetase [Phytophthora infestans T30-4]
 gi|262101719|gb|EEY59771.1| threonyl-tRNA synthetase [Phytophthora infestans T30-4]
          Length = 744

 Score =  584 bits (1505), Expect = e-164,   Method: Composition-based stats.
 Identities = 230/683 (33%), Positives = 355/683 (51%), Gaps = 57/683 (8%)

Query: 3   SDIKLTFPDGSIKN-FPVHATGSDVAESISRSLAKKAVAVAI-----------------N 44
           + IK+T PDG++K       T  DVA  IS+ LA + V   +                 +
Sbjct: 68  NPIKITLPDGAVKEGIAWQTTPLDVALGISQGLADQVVVARVTYRGKPEDPFSVTAADVD 127

Query: 45  G-------------------KVCDLSDP-VREGSIEIITPEDPRSLAVIRHSCAHIMAEA 84
           G                   ++ D+  P + +  +E++   D     V  HS AHI+ E+
Sbjct: 128 GNEASDKAGESCCGAVADSSELWDVFRPLIGDCRLELLKFNDAEGRMVFWHSSAHILGES 187

Query: 85  VQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSH 143
           +++I     + IGP +E GFYYD +   +     +L+ IEK  Q+++     F +  LS 
Sbjct: 188 LETI-KGAHLTIGPPVEGGFYYDSYMGTETIPESDLSVIEKACQKVVKDKQKFERIVLSK 246

Query: 144 EKARELFESKKEAYKVEILE-SIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMK 202
           E+A E+       +K +I+   IP     T YR G   DLCRGPHV  TG++K    + +
Sbjct: 247 EEALEM--FADNVFKTQIISTKIPDGGKTTAYRCGPLIDLCRGPHVPHTGKIK-ALAVTR 303

Query: 203 VAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDG 262
            + ++W G +    L R+YG ++  + ++ ++ +F  E+ KRDHR+L    +LF      
Sbjct: 304 TSSSHWLGKTTNDALQRVYGISFPDKNKMKEWKHFQAEAAKRDHRRLGVSEELFFFHSLS 363

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
            G  FW   G  I+  L+ ++R + +   Y EI TP + +  LW  SGH   Y+ NMF  
Sbjct: 364 PGSGFWLPHGSAIYFKLLKFIREQYRARGYTEIITPNIYNMELWNISGHAQHYKENMFVF 423

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
                   + + +ALKPMNCP    +F+   +SYRELP+RLA+ G ++RNE SG+L GL 
Sbjct: 424 DV------EGQEYALKPMNCPAASLMFDFRQRSYRELPIRLADCGVLHRNELSGALTGLT 477

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALW 441
           RVR F QDDAH+FC  +Q+  E L     +  +Y  FG E  + +LSTRPEK +G    W
Sbjct: 478 RVRRFQQDDAHIFCRDDQIKKEVLDFLTFMKYVYDVFGIEFNL-ELSTRPEKAMGELEQW 536

Query: 442 DDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFN 501
           + AE  +   LD    + +      V  G+GAFYGPK + ++ DA+ R  QC T+Q+DF 
Sbjct: 537 ERAETQLAQALDEFVGAGK----WVVNPGDGAFYGPKIDIMITDALKRQHQCATVQLDFQ 592

Query: 502 LPSRFNAFYVNSHSEK-CHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTI 560
           LP RFN  Y    +E    PV+IHRA++GS+ERF+ +++E++ G  P WLSP Q ++ T+
Sbjct: 593 LPIRFNLKYRTDDAENFKRPVIIHRAIYGSLERFVAVLVEHYAGKFPFWLSPRQILIVTV 652

Query: 561 TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
            ++ V+Y  E+ + L      +E D   +T+N KIRE  +     I++ G  E   RS+ 
Sbjct: 653 GAAFVDYGYEVKDALFRAGFDVEIDDSGKTLNKKIREGQMAHYNFILVVGAHEKETRSVN 712

Query: 621 IRRFGSTTTQKVSLLDAIPILTK 643
           IR   +      +L +AI +   
Sbjct: 713 IRTRDNKVRGTKTLEEAISMFKD 735


>gi|227892831|ref|ZP_04010636.1| theronyl-tRNA synthetase [Lactobacillus ultunensis DSM 16047]
 gi|227865333|gb|EEJ72754.1| theronyl-tRNA synthetase [Lactobacillus ultunensis DSM 16047]
          Length = 645

 Score =  584 bits (1505), Expect = e-164,   Method: Composition-based stats.
 Identities = 224/644 (34%), Positives = 346/644 (53%), Gaps = 22/644 (3%)

Query: 6   KLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITP 64
            +T PDGS K+F    +  D+A SI+ SL K AV   +NG V  L   +  +  + I+T 
Sbjct: 4   SITLPDGSKKDFDKAVSVKDLASSIATSLGKAAVGAKVNGAVKPLDYEINSDVEVAILTD 63

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           +D   L ++R + A  +    +  +PE+ +      E GFY D DK+      EL  +EK
Sbjct: 64  KDEEGLDILRATAAFALEAVAKKKYPELHLGEHVADEGGFYVDTDKKDQIKVTELPDLEK 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
            MQ++I          ++  +  ++++   + YK  +L  +   + V  Y+ G++ D   
Sbjct: 124 AMQKLIKSGQAIEHVEMAKSELADMYK--DDPYKSALLNKV-EGDKVDAYKLGDFVDFGF 180

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
              + +TG++K F KL+ VAGAYW G S+ PML RI+GTA+  +  L   L    E ++R
Sbjct: 181 DALLPNTGKIKHF-KLLSVAGAYWLGKSSNPMLQRIFGTAFFKESALKDDLKRRAEIKER 239

Query: 245 DHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQ 302
           DHR + R++DLF +      G+ +W  KG  I + +  Y+  R++ D Y+ + TP +++ 
Sbjct: 240 DHRTIGRDLDLFFVDPKVGAGLPYWMPKGATIRRVVERYIIDREVADGYDHVYTPVLMNL 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             ++ SGHW  YR +MF          D     L+PMNCP H+ +F H ++SYR+LP+R+
Sbjct: 300 DAYKTSGHWAHYRDDMFPPMDMG----DGEMLELRPMNCPSHIQIFKHHIRSYRDLPLRV 355

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  KI  LI+ +YKDF    
Sbjct: 356 AELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQVQDEFAKILKLIMDVYKDFDITD 415

Query: 423 IMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
              +LS R  K       +D +W+ ++ ++KG +D +       ++     GE AFYGPK
Sbjct: 416 YYFRLSYRDPKNTEKYFANDEMWERSQKMLKGAMDDLG------LDYVEAEGEAAFYGPK 469

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +   K A+G D    TIQ+DF LP RF   YV    E+  PVMIHR + G++ERFI  +
Sbjct: 470 LDIQTKTALGNDETMSTIQLDFMLPERFGLTYVGQDGEEHRPVMIHRGIVGTMERFIAYL 529

Query: 539 IENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
            E +KG  P WL+PIQA +  + +    EYA+++   L       E D RNE + YKIRE
Sbjct: 530 TEIYKGAFPTWLAPIQAEIIPVNNEAHGEYAEKVRQELAKRGFRAEVDDRNEKMGYKIRE 589

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
              +K+P  ++ GD E     + +RR+G+      SL D I  +
Sbjct: 590 SQTQKVPYTLVLGDDEMKSGKVNVRRYGTDEEISKSLDDFIKEI 633


>gi|260437371|ref|ZP_05791187.1| threonine--tRNA ligase [Butyrivibrio crossotus DSM 2876]
 gi|292810283|gb|EFF69488.1| threonine--tRNA ligase [Butyrivibrio crossotus DSM 2876]
          Length = 651

 Score =  584 bits (1504), Expect = e-164,   Method: Composition-based stats.
 Identities = 222/655 (33%), Positives = 342/655 (52%), Gaps = 20/655 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T  DGS K +    +  D+A+ IS  LA+ A A  I+GKV DL   V  + ++ I+T  
Sbjct: 3   VTLKDGSKKEYSEAMSVIDIAKDISEGLARNACAGEIDGKVVDLRTVVSEDCNLNILTFN 62

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D        H+ +H++AEAV+ ++P+ ++ IGP I++GFYYDFD    F    L  +E +
Sbjct: 63  DEAGKKAYWHTTSHVLAEAVKRLYPDAKLTIGPSIDEGFYYDFDCP-AFDRAALDNLEAE 121

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M++II   +   +  L  E+A +  E + E YKVE++  +P    ++ YRQG++ DLC G
Sbjct: 122 MKKIIKEGASLERFELPREEAIKFMEDRGEPYKVELINDLPEDAVISFYRQGDFVDLCAG 181

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PH+ ST  +K          AYWRG+SN  +L+RIYG ++    +L  YL  LE+ ++RD
Sbjct: 182 PHLMSTKAIKAVKLTASS-AAYWRGNSNNKVLTRIYGISFTKNDDLKAYLEHLEDIKRRD 240

Query: 246 HRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQH 303
           H KL REM+LF      G G+     KG +I +TL  ++   +    Y    TP +    
Sbjct: 241 HNKLGREMELFTTVDVIGQGLPLIMPKGERIIRTLQRWIEDEEDSRGYVRTKTPLMAKSD 300

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           L++ SGHWD Y+  MF +    D  KD   FAL+PM CP    V+    KSYR+LP+R  
Sbjct: 301 LYKISGHWDHYKDGMFVL---GDEEKDKEVFALRPMTCPFQYYVYKASQKSYRDLPLRYG 357

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           E  +++RNE SG +HGL RVR FT  + H+    +QM  E      L     +  G E+ 
Sbjct: 358 ETSTLFRNEDSGEMHGLTRVRQFTISEGHLIVRPDQMVKEFKDCIALAQYCLRTLGVEED 417

Query: 424 MVKLSTR------PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           +    +R        K +G   +W+D E  ++ VL+ +K      I     +GE AFYGP
Sbjct: 418 VTYHLSRWDPANPGNKYIGKPEVWEDTEQHIRNVLNELK------IPFVEDIGEAAFYGP 471

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +   K+  G++    TIQ D  L  +F+ +Y++   +K  P +IHR   G  ER +  
Sbjct: 472 KVDINAKNVYGKEDTMITIQWDALLAEQFDMYYIDEKGDKVRPYIIHRTSMGCYERTLAW 531

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE + G  P WL P Q  V  I+    +YA  +A  ++ H + +E D R E + YKIR+
Sbjct: 532 LIEKYAGMFPTWLCPEQVRVLPISDKYADYADSVAAKIREHKIYVEADHRAEKLGYKIRD 591

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
             + ++P I++ G+KE     + +R        +  L   I  + +E      +K
Sbjct: 592 ARLARVPYILVVGEKEQETGVVSVRSRFLGDEGQKPLEQFINDICEEIRTKAIRK 646


>gi|170575688|ref|XP_001893343.1| threonyl-tRNA synthetase, cytoplasmic [Brugia malayi]
 gi|158600735|gb|EDP37841.1| threonyl-tRNA synthetase, cytoplasmic, putative [Brugia malayi]
          Length = 685

 Score =  584 bits (1504), Expect = e-164,   Method: Composition-based stats.
 Identities = 222/648 (34%), Positives = 350/648 (54%), Gaps = 34/648 (5%)

Query: 2   PSDIKLTFPDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
              IK+T PDG          T   +AE ISR  A  AV   +NG+V DL  P   + ++
Sbjct: 51  SEKIKITLPDGKELEGESWRTTPLMIAEQISRGFADSAVVAKVNGEVWDLDRPFECDATL 110

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDE 118
           +I+  +D                +A++  +    +  GP I +GFYYD  KE    + D+
Sbjct: 111 QILKFDDDEGK------------QAMER-YCGGHLCYGPPISEGFYYDMWKEGSTITPDD 157

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
             ++E+ ++ ++    PF +  +S E   E+F+     +KV I+         T+YR G 
Sbjct: 158 FPKLEQIVKCVVKDKQPFERLVVSKEDLLEMFKY--NKFKVRIINEKITTPFTTVYRCGP 215

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLCRGPHVR TG+VK    + K + +YW G S+   L RIYG ++   ++L ++    
Sbjct: 216 LIDLCRGPHVRHTGKVKALTVV-KTSSSYWEGRSDAESLIRIYGISFPDSKQLKEWQKLQ 274

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
           EE+ KRDHRK+ R+ +L+       G  FW+ KG  I+ TL +++R++ +   + E+ +P
Sbjct: 275 EEAAKRDHRKIGRDQELYFFHPLSPGSAFWYPKGAHIYNTLCNFIRKEYRKRGFTEVISP 334

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  LW+QSGHW+ Y  NMF +        +  TF LKPMNCPGH  +++H  +++ E
Sbjct: 335 NMYNSKLWEQSGHWEHYSDNMFKI------DIEKETFGLKPMNCPGHCLMYSHMPRTHNE 388

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R A+FG ++RNE SG+L GL RVR F QDDAH+FC ++Q+  E +   + +   Y D
Sbjct: 389 LPLRYADFGVLHRNEMSGALTGLTRVRRFQQDDAHIFCRQDQVVEEIMGCIDFLKYAYLD 448

Query: 418 -FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
            FGF   +   +      +G    W+ AE+ ++  L+   +  +      +  G+GAFYG
Sbjct: 449 VFGFTFKLNLSTRPEVGYLGDIETWNAAEDKLREALNASGHKWE------LNPGDGAFYG 502

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK +  ++DA+ R  QC TIQ+DF LP RF+  Y + ++E+  PVMIHRA+ GSIER   
Sbjct: 503 PKIDITIQDALRRLHQCATIQLDFQLPVRFDLSYFDENNERQRPVMIHRALLGSIERMTA 562

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FRNETINYKI 595
           I+ EN+ G  P WLSP QA V T+  S  +Y +++   +      +E D   ++T+N +I
Sbjct: 563 ILAENYGGKWPFWLSPRQAKVITVHESQNDYGRKVQQEIYEAGFEVEFDVDSSDTLNKQI 622

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           R   I +   I++ G  EA   ++ +R   +    +V L D I    +
Sbjct: 623 RNAQIAQFNFILVVGPAEARNGTVNVRTRDNAVRGEVKLEDLIEKFKR 670


>gi|325912604|ref|ZP_08174987.1| threonine--tRNA ligase [Lactobacillus iners UPII 60-B]
 gi|325478025|gb|EGC81154.1| threonine--tRNA ligase [Lactobacillus iners UPII 60-B]
          Length = 643

 Score =  584 bits (1504), Expect = e-164,   Method: Composition-based stats.
 Identities = 230/646 (35%), Positives = 362/646 (56%), Gaps = 23/646 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS K F    T  +VA SI+ SLAK AVA  +N ++  L   V  +  + IIT +
Sbjct: 5   ITLPDGSKKEFNHALTIKEVASSIATSLAKSAVAGKVNDEIRPLDFVVDTDARVAIITDK 64

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L V+R++ A +        +P V++    + EDGF+ D DKE    + EL  +EK+
Sbjct: 65  DEEGLQVLRNTAAFVFEMVASKQYPSVRLGTSELEEDGFFVDTDKEDQIKASELPDLEKE 124

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           MQ+I+        + +S  +  +LF+   + YK+E+L+     + V +Y+  ++ D    
Sbjct: 125 MQKIVKNGEKIEYKIVSKSELLDLFK--DDPYKLELLKE--EADEVAVYKLEDFVDFGFN 180

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
             + +TG++K F KL+ VAGAYW+G S+ PML RI+GTA+  + +L   L   E+ ++RD
Sbjct: 181 ALLMNTGKLKHF-KLLSVAGAYWQGKSSNPMLQRIFGTAFFKEADLKADLQRREDIKERD 239

Query: 246 HRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQH 303
           HR + R++DLF +      G+ +W  KG  I + +  Y+  +++ D Y+ + TP +++  
Sbjct: 240 HRTIGRDLDLFFVDPKVGAGLPYWMPKGATIRRVIERYIIDKEVADGYQHVYTPVLMNLD 299

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
            ++ SGHW  YR +MF          D     L+PMNCP H+ ++NH ++SYRELP+R+A
Sbjct: 300 AYKTSGHWAHYREDMFPPMDMG----DGEMLELRPMNCPSHIQIYNHHIRSYRELPIRIA 355

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           E G ++R E SG+L GL RVR  T +D H F   +Q+ +E  KI  LI+ +Y+DF     
Sbjct: 356 ELGMMHRYEKSGALSGLQRVREMTLNDGHTFVELDQVQSEFAKILKLIMEVYRDFDITDY 415

Query: 424 MVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
             +LS R  K       +D +W+ ++ ++KG +D +       +      GE AFYGPK 
Sbjct: 416 YFRLSYRDPKNTDKYFANDEMWERSQKMLKGAMDDLG------LEYVEAEGEAAFYGPKL 469

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +   K A+G D    TIQ+DF LP RFN  YV    E+  PVM+HR + G++ERFI  + 
Sbjct: 470 DIQTKTALGNDETMSTIQLDFMLPERFNLSYVGKDGEEHRPVMVHRGIVGTMERFIAYLT 529

Query: 540 ENFKGNLPLWLSPIQAIVTTI-TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           E +KG  P WL+P+Q  +  +   +  EYAQ + + L       E DFRNE + YKIRE 
Sbjct: 530 EIYKGAFPTWLAPLQVKIIPVNNDAHGEYAQNVKDQLMKLGFRSEVDFRNEKLGYKIREA 589

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
             +K+P  ++ GD E    S+ +R++GS   +  +L + +  L+ +
Sbjct: 590 QTQKVPYTLVLGDDELQHNSVNVRKYGSEDQESKALSEFVSELSAD 635


>gi|282934500|ref|ZP_06339755.1| threonine--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|281301447|gb|EFA93736.1| threonine--tRNA ligase [Lactobacillus jensenii 208-1]
          Length = 644

 Score =  584 bits (1504), Expect = e-164,   Method: Composition-based stats.
 Identities = 228/647 (35%), Positives = 361/647 (55%), Gaps = 23/647 (3%)

Query: 6   KLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITP 64
            +T PDGS KNF    +  D+A+ IS SL K AVA  ++G+V  ++  +  +  + I+T 
Sbjct: 5   SITLPDGSKKNFDQAVSVLDLAKGISTSLGKAAVAAKVDGEVKPVNFMLEKDSEVAILTD 64

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           +D   LAV+R + A ++  A Q+ +PE+++      EDGF+ D DKE      EL ++EK
Sbjct: 65  KDEAGLAVLRDTVAFLLEAAAQAKYPELRLGEHEANEDGFFVDTDKEDQIKITELPELEK 124

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
            + ++I          +   +     E K + +K+E+L+S    + V  ++ G++ D   
Sbjct: 125 AIVKLIKNGQAIEPVMVKKSELEA--EFKNDPFKMELLKS--EGDEVAAFKMGDFVDFGF 180

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
              + ++G+VK F KL+ VAGAYW+G S+ PML R++GTA+  + +L   L    E ++R
Sbjct: 181 KALLPNSGKVKHF-KLLSVAGAYWQGKSSNPMLQRLFGTAFFKETDLEADLKRRAEIKER 239

Query: 245 DHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQ 302
           DHR + R++DLF +      G+ +W  KG  I + +  Y+  +++ D Y+ + TP +++ 
Sbjct: 240 DHRTIGRDLDLFFVDPKVGAGLPYWMPKGATIRRVIERYIIDKELADGYQHVYTPVLMNL 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             ++ SGHW  YR +MF          D     L+PMNCP H+ V+ H ++SYRELP+R+
Sbjct: 300 DAYKTSGHWAHYREDMFPPMDMG----DGEMLELRPMNCPSHIQVYKHHIRSYRELPIRI 355

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AE G ++R E SG+L GL RVR  T +D H F   EQ+  E  KI  LI+ +YKDF    
Sbjct: 356 AELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALEQVQEEFAKILKLIMDVYKDFDITD 415

Query: 423 IMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
              +LS R  K       +D +W+ ++ ++KG +D +       ++     GE AFYGPK
Sbjct: 416 YYFRLSYRDPKNTDKYFANDEMWERSQKMLKGAMDDLG------LDYVEAEGEAAFYGPK 469

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +   K A+G D    TIQ+DF LP RF+  YV    E+  PVMIHR + G++ERFI  +
Sbjct: 470 LDIQTKTALGNDETMSTIQLDFMLPERFDLSYVGQDGEEHRPVMIHRGIVGTMERFIAYL 529

Query: 539 IENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
            E +KG  P WL+P Q  +  +   +  EYA+++ + L  H    E DFRNE + YKIRE
Sbjct: 530 TEIYKGAFPTWLAPEQVEIIPVNLDAHGEYAKKVRDELLKHGFRAEVDFRNEKMGYKIRE 589

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
              +K+P  ++ GD E +  ++ +R +G+   + +SL   I  L  +
Sbjct: 590 SQTQKVPYTLVLGDDEMNSNAVNVRPYGTEKQESMSLDKFIDELQAD 636


>gi|298530062|ref|ZP_07017464.1| threonyl-tRNA synthetase [Desulfonatronospira thiodismutans ASO3-1]
 gi|298509436|gb|EFI33340.1| threonyl-tRNA synthetase [Desulfonatronospira thiodismutans ASO3-1]
          Length = 646

 Score =  584 bits (1504), Expect = e-164,   Method: Composition-based stats.
 Identities = 271/636 (42%), Positives = 397/636 (62%), Gaps = 23/636 (3%)

Query: 21  ATGSDVAESISRSLA----KKAVAVAINGKVCDLSDPVRE--GSIEIITPEDPRSLAVIR 74
           +TG+   E +S++L+    K+AVA     ++ DL   V E  G +E ++   P  L V+R
Sbjct: 14  STGATCREILSKALSGKKFKEAVACRCEDRLYDLGSEVDEQCGVLEPVSLSSPEGLKVLR 73

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDS 134
           HS AHIMAEAV++I+P  +V IGP IE GFYYDFD E+PF+ ++L +IE +M   IA+D 
Sbjct: 74  HSAAHIMAEAVKTIFPSARVTIGPDIEHGFYYDFDYERPFTPEDLEKIEAEMARSIAQDQ 133

Query: 135 PFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQV 194
           PF +  +S E+A+++F    E YK+EI      ++ V+LYR G++ DLCRGPHV STG V
Sbjct: 134 PFERVVMSREEAKKVFLDMNETYKLEI-LDELEEDEVSLYRHGDFIDLCRGPHVPSTGYV 192

Query: 195 KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMD 254
           K F KL  VAGAYWRGD  RPML RIYGTA+ + +EL ++L  LEE+ KRDHRKL  ++D
Sbjct: 193 KSF-KLTSVAGAYWRGDEKRPMLQRIYGTAFASDKELKKHLTRLEEARKRDHRKLGAQLD 251

Query: 255 LFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWD 312
           LF  +E+ G G+  +H KG  I   L  + R   ++  Y+ +  PQ+L + LW++SGH+D
Sbjct: 252 LFSFSEEAGPGMPIFHPKGALIRTILEDFERKEHLRRGYQIVQGPQILRRELWEKSGHYD 311

Query: 313 SYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE 372
           +YR NM+       T  D + + +KPMNC  H+ ++   L+SYR+LP+R  E G V+R+E
Sbjct: 312 NYRENMYF------THIDEQVYGVKPMNCLSHMLIYKSKLRSYRDLPLRYFELGRVHRHE 365

Query: 373 PSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
            SG LHGL+RVR FTQDDAH+ C  +Q+ +E   + N +  +   FGFE + V++STRPE
Sbjct: 366 KSGVLHGLLRVREFTQDDAHILCRPDQLQDEITGVVNFVRDVMGLFGFEYV-VEVSTRPE 424

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
           K +GS   W+ +   +   LD +       +   +  G+GAFYGPK +  LKDA+ R WQ
Sbjct: 425 KHIGSSEAWEKSTRALTSALDAL------DMPYEINPGDGAFYGPKIDIKLKDALDRKWQ 478

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
           C T+Q DF LP RF+  Y      K  PVM+HR V G+IERF+G++IE++ G  P WL+P
Sbjct: 479 CATVQCDFTLPERFDLTYTGEDGRKYRPVMLHRVVLGAIERFLGVLIEHYGGAFPTWLAP 538

Query: 553 IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
           +QA +  IT +   Y  + A+  +   + +E D RNE + YK+RE  ++KIP +++ GD+
Sbjct: 539 VQARIMNITDAQAGYVHDCADRFRQMGIRVEVDDRNEKLGYKVREAQMEKIPYVLVAGDQ 598

Query: 613 EASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
           E  E  + +R  G      +S+ +    + ++   P
Sbjct: 599 EVQESGLNVRLRGGKNLGLMSIQEVADQIFQDMDEP 634


>gi|47226601|emb|CAG08617.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 677

 Score =  583 bits (1503), Expect = e-164,   Method: Composition-based stats.
 Identities = 237/621 (38%), Positives = 346/621 (55%), Gaps = 32/621 (5%)

Query: 2   PSDIKLTFPDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
              IK+T P G + +      T   VA  IS+ LA   V   +N  V DL  P+  + ++
Sbjct: 71  SRAIKVTLPGGKVVDAESWRTTPYQVACGISQGLADNTVIAKVNNDVWDLDRPLEEDCTL 130

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDE 118
           +++  +D  + AV  HS AHI+ EA++ ++    +  GP IE+GFYYD   E +  SS++
Sbjct: 131 QLLKFDDEEAQAVYWHSSAHILGEAMERVYGGC-LCYGPPIENGFYYDMFLENEGVSSND 189

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
              +E   ++II    PF +  +  E   E+F+  K  +K  IL         T+YR G 
Sbjct: 190 FPCLENLCKKIIKEKQPFERLEIKKETLLEMFKYNK--FKCRILNEKVTTPTTTVYRCGP 247

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLCRGPHVR TG++K   K+ K +  YW G ++   L RIYG ++   + L ++  F 
Sbjct: 248 LIDLCRGPHVRHTGKIK-ALKIHKNSSTYWEGKADMESLQRIYGISFPDPKMLKEWEKFQ 306

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE++ RDHRKL RE +LF   +   G  F+  KG  I+ TLI ++R + +   ++E+ +P
Sbjct: 307 EEAKNRDHRKLGREQELFFFHDLSPGSCFFLPKGAFIYNTLIEFIRSEYRRRGFQEVVSP 366

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  LWQ SGHW  Y  NMF+ +       +  TFALKPMNCPGH  +F+H  +S+RE
Sbjct: 367 NIYNSKLWQTSGHWQHYSENMFSFE------SEKETFALKPMNCPGHCLMFDHRPRSWRE 420

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+A+FG ++RNE SG+L GL RVR F QDDAH+FC+ +Q+  E     + + ++Y  
Sbjct: 421 LPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCSMDQIEGEIKGCLDFLRTVYNV 480

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF   +  LSTRPEK +G   +WD AE  ++  L+             +  G+GAFYGP
Sbjct: 481 FGFTFKLN-LSTRPEKFLGDPDVWDQAEKQLENSLNEFGEKW------VLNPGDGAFYGP 533

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC-HPVMIHRAVFGSIERFIG 536
           K +  +KDAIGR  QC TIQ+DF LP RFN  +V    +    PV+IHRA+ GS+ER I 
Sbjct: 534 KIDIQIKDAIGRYHQCATIQLDFQLPIRFNLTFVGHDGDDKNRPVIIHRAILGSVERMIA 593

Query: 537 IMIENFKGNL---------PLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR 587
           I+ ENF G           PLWLSP Q ++  +  +  EYAQ++     S     + D  
Sbjct: 594 ILTENFGGKWWAVSEGTRRPLWLSPTQVMIVPVGPTCEEYAQKVRQDFHSSGFMTDVDLD 653

Query: 588 -NETINYKIREHSIKKIPIII 607
              T+N KIR   + +   I+
Sbjct: 654 PGCTLNKKIRNAQLAQYNFIL 674


>gi|322371434|ref|ZP_08045983.1| threonyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
 gi|320548966|gb|EFW90631.1| threonyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
          Length = 645

 Score =  583 bits (1503), Expect = e-164,   Method: Composition-based stats.
 Identities = 253/640 (39%), Positives = 374/640 (58%), Gaps = 19/640 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           ++ PDGS + F    + SDVA  I   L +  +A  ++G +      +     + I+TP 
Sbjct: 11  VSLPDGSKREFDGPVSVSDVAYDIGPGLGEDCLAGIVDGNLVAPEYRIGSNSDLRIVTPG 70

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
              ++ V+RHS AH++A+AV  ++P+ ++AIGP  ++GFYYDFD       D+LA IE +
Sbjct: 71  SEDAVRVLRHSAAHVLAQAVSRLFPDAKLAIGPPTDEGFYYDFDGLD-IDEDDLADIEAE 129

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M++I++ D   +++ +S E+ARE      + YK+E+L+ I A E VT YRQGE+ DLC G
Sbjct: 130 MRDIVSADYDIVREEVSPEEARERLA--DQPYKLELLDDIAADEPVTFYRQGEFEDLCAG 187

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV STG+V     L ++AGAYWRGD +  ML+R+YGTA+  + EL  +L   EE+ KRD
Sbjct: 188 PHVASTGEVGALSLL-EIAGAYWRGDEDEAMLTRMYGTAFERESELESFLERREEAAKRD 246

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHL 304
           HRK+ REMDLF + +   G + +H  G  I + L  Y+R K  +  YEE+ TP++    L
Sbjct: 247 HRKIGREMDLFSVPDHSPGCVNFHPNGMAIRRELEEYVREKNAELGYEEVKTPELNHTEL 306

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGH+D ++             ++   + LKPMNC  H  +++   +SYR+LP+R +E
Sbjct: 307 WKKSGHYDHFKEEGEMF----AWEQNGHEYGLKPMNCANHAHIYDDQRRSYRDLPLRFSE 362

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FG  YRNE SG L G++RVRGFTQDD H F   E +  E  +  ++I  +Y+ FG +  +
Sbjct: 363 FGMCYRNEQSGELSGMLRVRGFTQDDGHAFVRPEGIREEIARTLSVIDGMYEAFGLDAHL 422

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           V L T+P+  +G D LW+ A   ++  L+       + +   V  GEGAFYGPK    ++
Sbjct: 423 V-LETKPDDAIGDDELWERAHEALRNALED------EGLEYDVAEGEGAFYGPKIAINVE 475

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           DAIGR+W  GT+Q+DF  P R +  YV   +E+  PVMIHRA+ GS+ERF+G+ IE+  G
Sbjct: 476 DAIGREWTIGTVQLDFVQPERLDISYVGEDNEEHRPVMIHRALLGSMERFMGVFIEHVAG 535

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P WL+P Q  +  IT     YA+EIA+ L S    +E D R+ T+  KIR     ++P
Sbjct: 536 KFPFWLAPEQVRILPITDDESGYAEEIADELGS--FRVEVDDRDWTLGKKIRAGHDDRVP 593

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            +II G  EA   +I +R         V   D    L  E
Sbjct: 594 YMIIVGSDEAESGTISVRDREERQEGGVERDDFRRHLEAE 633


>gi|296187094|ref|ZP_06855492.1| threonyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|296048288|gb|EFG87724.1| threonyl-tRNA synthetase [Clostridium carboxidivorans P7]
          Length = 560

 Score =  583 bits (1502), Expect = e-164,   Method: Composition-based stats.
 Identities = 262/565 (46%), Positives = 371/565 (65%), Gaps = 15/565 (2%)

Query: 81  MAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQY 140
           M + V+ ++PEV++AIGP I+ GFYYDFD E  F+ + L +IE +M +II  +    +  
Sbjct: 1   MLKLVKKVYPEVKLAIGPAIDTGFYYDFDAEFSFTPEMLEKIEVEMNKIIKENLKLERFE 60

Query: 141 LSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKL 200
           L  E+A +L + KKE YKVE+++ +P    ++ Y+QG++ DLC GPHV STG+VK   KL
Sbjct: 61  LPREEAIKLMQEKKECYKVELIKDLPEDAVISFYKQGDFVDLCAGPHVPSTGKVK-AVKL 119

Query: 201 MKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAE 260
           + +AGAYW+GD    ML RIYGTA+  + +L  YL  LEE++KRDHRKL +E+DLF + E
Sbjct: 120 LSIAGAYWKGDEKNKMLQRIYGTAFEKKADLDAYLNMLEEAKKRDHRKLGKELDLFSMHE 179

Query: 261 DGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMF 319
           +G G  F+H KG  I  TL ++ R      DY+EI TP +L++ LW+QSGHWD Y+ NM+
Sbjct: 180 EGPGFPFFHPKGMIIRNTLQNFWREMHSAADYDEIMTPVILNEKLWRQSGHWDHYKENMY 239

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHG 379
             K       D   +A+KPMNCPG + V+ + + SYRELP+R AE G  +R+E SG+LHG
Sbjct: 240 FTKI------DNEDYAIKPMNCPGSILVYKNTIHSYRELPLRYAEMGLAHRHEKSGALHG 293

Query: 380 LMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDA 439
           LMRVR FTQDDAH+F  K+ + +E + +  LI   YK FGFE   V+LSTRPE  +GSD 
Sbjct: 294 LMRVRCFTQDDAHMFLAKDNITDEIVNVIKLIDDFYKVFGFEYF-VELSTRPEDSMGSDE 352

Query: 440 LWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVD 499
            W+ A N ++  LDTI       +   V  G+GAFYGPK ++ L+D IGR WQCGT+Q+D
Sbjct: 353 DWEAATNGLRKALDTIG------LKYKVNEGDGAFYGPKIDFHLRDCIGRTWQCGTVQLD 406

Query: 500 FNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTT 559
           F +P RF+  Y+ +  EK  PVM+HR VFGS+ERFIGI+IE++ G  P WL+P+Q  +  
Sbjct: 407 FQMPERFDLTYIGADGEKHRPVMVHRVVFGSVERFIGILIEHYAGAFPAWLAPVQVKIMN 466

Query: 560 ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSI 619
           IT   ++YA ++A  LK + + +E D RNE I YKIRE  ++K+P +++ GDKE  E ++
Sbjct: 467 ITDDQIDYANKVAKELKKNKIRVEVDLRNEKIGYKIREAQLQKVPYMLVLGDKEMKENTV 526

Query: 620 GIRRFGSTTTQKVSLLDAIPILTKE 644
            +R         ++L   +  +  E
Sbjct: 527 AVRSRKLGDLGAMALDQFVEKIKGE 551


>gi|220903768|ref|YP_002479080.1| threonyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|254783519|sp|B8J4E4|SYT_DESDA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|219868067|gb|ACL48402.1| threonyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 647

 Score =  583 bits (1502), Expect = e-164,   Method: Composition-based stats.
 Identities = 266/645 (41%), Positives = 382/645 (59%), Gaps = 23/645 (3%)

Query: 12  GSIKNFPVHATGSDVA-ESISRSLAKKAVAVA-IN--GKVCDLSDPVREGS--IEIITPE 65
           G +       + + +  +++S    K  VA   ++   ++ DLS PV  G   IE +  +
Sbjct: 7   GQMVEGQAGDSVAAILQKALSGKKFKAVVAARALDSAEELLDLSSPVPAGCTGIEPVYAD 66

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
            P  L ++RHS AH+MA AV+ ++P+ +V IGP IE GFYYDFD E+PFSS++ + IE +
Sbjct: 67  SPEGLQILRHSTAHVMAAAVKQLFPKTRVTIGPSIESGFYYDFDVEKPFSSEDFSAIEAE 126

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           MQ I     PF ++ LS  +A E F++  E YKVEI+E I A   V++Y    + DLCRG
Sbjct: 127 MQRIANAREPFTREVLSRAEAIERFKAMGEDYKVEIIEGIDAD-TVSVYTCSGFADLCRG 185

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV  TG  K   KLM VAGAYWRGD    MLSRIYGTA+  ++ L  YL  +EE+++RD
Sbjct: 186 PHVPHTGFAK-ASKLMSVAGAYWRGDEKNRMLSRIYGTAFADEKALAAYLKQMEEAKRRD 244

Query: 246 HRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQH 303
           HRKL RE+ LF   ED   G++FW  KG  +   L  + R   +K  Y+ +  PQ+L   
Sbjct: 245 HRKLGRELSLFTFKEDVAPGMVFWLPKGMLVRTILEDFWRKEHLKRGYDIVQGPQLLRVE 304

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
            WQ+SGH+D YR NM+  +  +D       + +KPMNC  H+ ++ + L SYR+LP R  
Sbjct: 305 TWQKSGHYDHYRENMYFTQIEEDA------YGVKPMNCISHMLIYGNELHSYRDLPQRYF 358

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           E G V+R+E SG LHGL+RVR FTQDDAH+ C  EQ+  E L++ +LI  +   FGFE  
Sbjct: 359 ELGVVHRHEKSGVLHGLLRVRQFTQDDAHIICAPEQLEGEILEVIHLIRDLMNLFGFEYK 418

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +  +STRPE  +G+D  W+ A + +   ++         +   +  G+GAFYGPK +  L
Sbjct: 419 VA-VSTRPESSIGTDEAWEMATSALVQAVEKAG------LPYTINEGDGAFYGPKIDVRL 471

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D IGR+WQC TIQVDF LP RF+  YV    E+  PVM+HRA+ GS+ERFIGI++ENF 
Sbjct: 472 LDCIGREWQCSTIQVDFTLPERFDLTYVGQDGERHRPVMVHRAIMGSLERFIGILVENFA 531

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G LP WL+P QA + T+T +  E    +    K+  +  + D RNE + +K+RE  + K+
Sbjct: 532 GALPTWLAPEQARLLTVTEAGDEAVSSMLEEFKALGIRAQADTRNEKLGFKVREAQLAKV 591

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
           P I++ G+KE       +R          S+ +   ++  ++  P
Sbjct: 592 PYILVVGEKEVQAGGANVRLRNGDNLGLKSVAEIAALIRTDAEEP 636


>gi|218200880|gb|EEC83307.1| hypothetical protein OsI_28676 [Oryza sativa Indica Group]
          Length = 716

 Score =  582 bits (1501), Expect = e-164,   Method: Composition-based stats.
 Identities = 219/648 (33%), Positives = 356/648 (54%), Gaps = 51/648 (7%)

Query: 3   SDIKLTFPDGSIKNFPVH-ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIE 60
             I++T PDG++K+     +T  D+A+ IS  LA   +   +NG + D++ P+  +  ++
Sbjct: 109 EPIRITLPDGAVKDGKKWISTPMDIAKEISSGLANSCLIAQVNGTLWDMTRPLEGDCELK 168

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII--EDGFYYD-FDKEQPFSSD 117
           +   +         HS AHI+ E+++  +   ++ IGP     +GFYYD +  +   +  
Sbjct: 169 LFKFDSNEGRDTFWHSSAHILGESLERAY-GCKLCIGPCTTRGEGFYYDAYYNDLTLNET 227

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
               I+ + Q+ +A   PF +  +S  +A E+F   K  +KVEI+  +P  + +T+YR G
Sbjct: 228 HFGIIDAQAQKAVAEKQPFERIEVSRAEALEMFAENK--FKVEIINELPEDKTITVYRCG 285

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
              DLCRGPH+ +T  VK F   +K + +YWRG ++R  L R+YG ++   + L +Y + 
Sbjct: 286 PLVDLCRGPHIPNTSFVKAF-ACLKASSSYWRGKADRESLQRVYGISFPDSKRLKEYKHL 344

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINT 296
           LEE++KRDHR L +  DLF   +   G  F+   G  I+  L+ ++R++ +   Y+E+ +
Sbjct: 345 LEEAKKRDHRLLGQTQDLFFFHQLSPGSCFFLPHGAIIYNKLMDFLRQQYRDRGYQEVLS 404

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P + +  LW+ SGH  +Y+ NMF  +       + + F LKPMNCPGH  +F H ++SYR
Sbjct: 405 PNIYNMQLWETSGHAANYKENMFVFEI------EKQEFGLKPMNCPGHCLMFEHRVRSYR 458

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ELP+R+A+FG ++RNE SG+L GL RVR F QDDAH+FC + Q+ +E   + + I  +Y+
Sbjct: 459 ELPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCRESQIKDEVKAVLDFINYVYE 518

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
            FGF+  + +LSTRPEK +G    W+ AE  +   L+      Q      +  G+GAFYG
Sbjct: 519 IFGFKYEL-ELSTRPEKYLGDIETWNKAEQQLTEALNEFGKPWQ------INEGDGAFYG 571

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK +  + DA+ R +QC T+Q                            A+ GS+ER   
Sbjct: 572 PKIDIGVFDALKRKFQCATLQ----------------------------AILGSVERMFA 603

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           I++E++ G  PLWLSP QAIV +I+S++VEYA+++   +      +  D  + TI  K+R
Sbjct: 604 ILLEHYNGKWPLWLSPRQAIVCSISSNSVEYAKQVRARIHEAGFHVAIDETDRTIQKKVR 663

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           E  + +   I++ G +EA    + +R         VS+ D I    +E
Sbjct: 664 EAQLAQFNYILVVGAQEAETGQVSVRVRDKAELATVSIDDIITRFKEE 711


>gi|291443408|ref|ZP_06582798.1| threonyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
 gi|291346355|gb|EFE73259.1| threonyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
          Length = 658

 Score =  582 bits (1501), Expect = e-164,   Method: Composition-based stats.
 Identities = 262/664 (39%), Positives = 382/664 (57%), Gaps = 38/664 (5%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           SD+++     S +   V  TG+  A  +     +  VA  I G++ DLS  +++G S+E 
Sbjct: 2   SDVRVIIQRDSEREEHVVTTGTT-AGELFPG-QRTVVAARIGGELKDLSYVLQDGESVEP 59

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +       L ++RHS AH+MA+AVQ ++PE ++ IGP ++DGFYYDFD E+PF+ ++L  
Sbjct: 60  VEISSEDGLNILRHSTAHVMAQAVQELFPEAKLGIGPPVKDGFYYDFDVEKPFTPEDLKA 119

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL------------ESIPAKE 169
           IEKKMQEI  R   F ++ +S E ARE  E   E YK+E++            +      
Sbjct: 120 IEKKMQEIQKRGQKFSRRVVSDEDARE--ELANEPYKLELIGIKGSASSDDGADVEVGGG 177

Query: 170 NVTLYRQGE-------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYG 222
            +T+Y   +       W DLCRGPH+ +T  +  F KLM+ A AYWRG    PML RIYG
Sbjct: 178 ELTIYDNLDAKTGELCWKDLCRGPHLPTTRFIPAF-KLMRNAAAYWRGSEKNPMLQRIYG 236

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLIS 281
           TAW T+ EL  +L FLEE+ KRDHRKL  E+DLF   ++ G G+  +H KG  I + +  
Sbjct: 237 TAWPTKDELKAHLEFLEEAAKRDHRKLGNELDLFSFPDEIGPGLAVFHPKGGVIRRAMED 296

Query: 282 YMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
           Y RR   ++ YE + +P      L+++SGH D Y   M+     D    D   + LKPMN
Sbjct: 297 YSRRRHEEEGYEFVYSPHATKGKLFEKSGHLDWYADGMYPPMQLD----DGVDYYLKPMN 352

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
           CP H  +F+   +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDDAH++CTKEQM
Sbjct: 353 CPMHNLIFDARGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRSRGFTQDDAHIYCTKEQM 412

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDTIKNSS 459
             E  +    ++++ +D+G     ++LST+  +  VGSD  W++A   ++ V +      
Sbjct: 413 AEELDRTLTFVLNLLRDYGLTDFYLELSTKDPEKYVGSDETWEEATATLQQVAE------ 466

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
           +  +      G  AFYGPK     KDAIGR WQ  T+Q+DFNLP RF+  Y      K  
Sbjct: 467 KQGLPLVPDPGGAAFYGPKISVQCKDAIGRTWQMSTVQLDFNLPERFDLEYTGPDGSKQR 526

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH 579
           PVMIHRA+FGSIERF  +++E++ G  P+WL+P+QA+   I  + + Y QE A   +   
Sbjct: 527 PVMIHRALFGSIERFFAVLLEHYAGAFPVWLAPVQAVGIPIGDAHIPYLQEFAAKARKQG 586

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
           L ++ D  ++ +  KIR     K+P +II GD++ +  ++  R    +    + + +AI 
Sbjct: 587 LRVDVDASSDRMQKKIRNQQKNKVPFMIIAGDEDMANGAVSFRYRDGSQENGIPVDEAIA 646

Query: 640 ILTK 643
            + K
Sbjct: 647 KIAK 650


>gi|189091896|ref|XP_001929781.1| hypothetical protein [Podospora anserina S mat+]
 gi|27803058|emb|CAD60761.1| unnamed protein product [Podospora anserina]
 gi|188219301|emb|CAP49281.1| unnamed protein product [Podospora anserina S mat+]
          Length = 783

 Score =  582 bits (1501), Expect = e-164,   Method: Composition-based stats.
 Identities = 237/696 (34%), Positives = 359/696 (51%), Gaps = 66/696 (9%)

Query: 3   SDIKLTFPDGSIKNFPV-HATGSDVAESISRSLAKKAVAVAINGK-VCDLSDPVRE-GSI 59
            DI +T PDG+IK       T +++A+ IS SL K+ V   I+G+ + DL  P+ +   +
Sbjct: 74  EDITITMPDGTIKVGKSYETTPAEIAKGISNSLFKRTVVARIDGETLWDLERPLEKSCKL 133

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ--PFSSD 117
           E++   D +   V  HS AHI+ EA +  +    + IGP +++GFYY+          S 
Sbjct: 134 ELLDFNDDQGKFVFWHSSAHILGEACERRF-GCSLCIGPPVDNGFYYEMALPDGAAVQST 192

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES-IPAKENVTLYRQ 176
           + A +E  + +++    PF +  +S E   ++       YK  I++  I      T+YR 
Sbjct: 193 DWAPLENIVSKVVKEKQPFQRLEMSKEDLLKM--FAYNKYKQHIIKDKIEDGTKTTVYRN 250

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           G   DLCRGPHV  TG+++ F  +MK + +Y+ GD+N   L RIYG ++  ++++  +  
Sbjct: 251 GPLIDLCRGPHVPDTGRIEAF-AIMKNSSSYFLGDANNDSLQRIYGVSFPDKKQMAAHKK 309

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEIN 295
           FLEE+ KRDHR + ++ +LF+  E   G   W   G +I   ++ Y++ +     Y+E+ 
Sbjct: 310 FLEEAAKRDHRLIGKQQELFYFEECSPGSAMWLPHGMRIHNAIMDYIKEEYWARGYDEVM 369

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP + +  LW+QSGH   Y+ +MF +        D   F LKPMNCP H  +F H  +S+
Sbjct: 370 TPNMFNVSLWEQSGHLAHYKEDMFLLDV------DKEQFGLKPMNCPAHAMMFRHRERSH 423

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           +ELP+RLA+FG ++RNE SG+L GL RVR F QDDAH+FC ++Q+  E   + + +   Y
Sbjct: 424 KELPLRLADFGVLHRNEASGALSGLTRVRRFQQDDAHIFCREDQIKEEVADLFDFMRKFY 483

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD-RINTGVLLGEGAF 474
              G    + KLSTRPEK +G    WD AE+ +K  LD    S +D  ++  +  G+GAF
Sbjct: 484 GILGLTFKL-KLSTRPEKFLGEIETWDRAESRLKEALDEFAASDKDGGVSWELNPGDGAF 542

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC---------------- 518
           YGPK +  + D + R WQC TIQ+DF  P  F+  Y    +                   
Sbjct: 543 YGPKIDIAVLDCLNRPWQCATIQLDFQQPQNFSLEYQTGEAVHKGETKAAVEEPAPPAPE 602

Query: 519 ---------------------------HPVMIHRAVFGSIERFIGIMIENFKGNLPLWLS 551
                                       PVMIHRA+ GSIERF  I+ E+F G  P W+S
Sbjct: 603 AEAEKDKDGKEKKKPLLIKKALSPGCARPVMIHRAMAGSIERFTAILAEHFAGKWPFWMS 662

Query: 552 PIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
           P Q IV  +    ++YA+E+A LLK      + D    T+  KIR   + +   + + GD
Sbjct: 663 PRQVIVIPVGMGFLDYAKEVAALLKKEKFYADVDSSGNTLQKKIRNGQLAQYNFVFVVGD 722

Query: 612 KEASERSIGIRRFGSTTTQK----VSLLDAIPILTK 643
            E   R + IR    T+TQ       L +AI  L +
Sbjct: 723 DEMRNRKVNIRYRDDTSTQARDVPFDLDEAIQKLRQ 758


>gi|295425303|ref|ZP_06818006.1| threonine--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
 gi|295065079|gb|EFG55984.1| threonine--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
          Length = 659

 Score =  582 bits (1500), Expect = e-164,   Method: Composition-based stats.
 Identities = 228/644 (35%), Positives = 352/644 (54%), Gaps = 22/644 (3%)

Query: 6   KLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITP 64
            +T PDGS K+F  + + +D+A  I+ SL K AVA  +NG++  L   +  +  + IIT 
Sbjct: 19  SITLPDGSKKDFDENLSIADLAHKIATSLGKAAVAGKVNGQIEPLDYELDSDAEVAIITD 78

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           +D   L V+R + A +     ++ +P++ +      E GFY D DK+      EL ++EK
Sbjct: 79  KDKEGLDVLRATAAFLFEAVAKAKYPKLHLGEHVTDEGGFYVDTDKDDQIKIGELPELEK 138

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
            M++ I          +S     +  E K + YK  +L  I   + V  Y+ G++ D   
Sbjct: 139 AMEKAIKNGEKIEHVRVSKSDLED--EYKDDPYKSALLAKI-DDDVVDAYKLGDFVDFGF 195

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
              + +TG++K F KL+ VAGAYW G S+ PML RI+GTA+  + +L   L   +E ++R
Sbjct: 196 DALLPNTGKIKHF-KLLSVAGAYWGGKSSNPMLQRIFGTAFFKEADLKADLKRRQEIKER 254

Query: 245 DHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQ 302
           DHR + R++DLF +      G+ +W  KG  I + +  Y+  R++ D Y+ + TP +++ 
Sbjct: 255 DHRTIGRDLDLFFVDPKVGAGLPYWMPKGATIRRVVERYIIDREVADGYQHVYTPVLMNL 314

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             ++ SGHW  YR +MF          D     L+PMNCP H+ +F H ++SYR+LP+R+
Sbjct: 315 DAYKTSGHWAHYRDDMFPPMDMG----DGEMLELRPMNCPSHIQIFKHHIRSYRDLPLRV 370

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  KI  LI+ +YKDF    
Sbjct: 371 AELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQVQDEFAKILKLIMDVYKDFDITD 430

Query: 423 IMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
              +LS R  K       +D +W+ ++ ++KG +D +       ++     GE AFYGPK
Sbjct: 431 YYFRLSYRDPKNTQKYFANDEMWERSQKMLKGAMDDLG------LDYVEAEGEAAFYGPK 484

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +   K A+G D    TIQ+DF LP RF   YV    E+  PVMIHR + G++ERFI  +
Sbjct: 485 LDIQTKTALGNDETMSTIQLDFMLPDRFGLTYVGKDGEEHRPVMIHRGIVGTMERFIAYL 544

Query: 539 IENFKGNLPLWLSPIQAIVTTI-TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
            E +KG  P WL+PIQA +  +   +  EYA+++   L       E D RNE + YKIRE
Sbjct: 545 TEIYKGAFPTWLAPIQAEIIPVNNDAHGEYAEKVRQELAKRGFRAEVDNRNEKLGYKIRE 604

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
              +K+P  ++ GD+E    S+ +RR+G+      SL D I  +
Sbjct: 605 SQTQKVPYTLVLGDEEMKSNSVNVRRYGTDEEISKSLDDFINEI 648


>gi|291515296|emb|CBK64506.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Alistipes shahii
           WAL 8301]
          Length = 604

 Score =  582 bits (1500), Expect = e-164,   Method: Composition-based stats.
 Identities = 233/607 (38%), Positives = 361/607 (59%), Gaps = 21/607 (3%)

Query: 50  LSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF 108
           ++ P+  + S++    +D        H+ +H++AEA+++++P ++  IGP IE+GFYYD 
Sbjct: 1   MTRPIEEDASVKFYKWDDEEGKHAFWHTSSHLLAEALEALYPGIKFGIGPAIENGFYYDV 60

Query: 109 DKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK 168
           D   P +  +L  IE KM E+       L++ +   +A + F  K + YKVE++  +   
Sbjct: 61  DSPTPITEADLPTIENKMVELSRNKEALLRREVPKAEALKTFTEKGDQYKVELITDL-ED 119

Query: 169 ENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQ 228
             ++ Y  G + DLCRGPH+ +TG +K   KL  VAGAYWRG+    ML+RIYG ++  +
Sbjct: 120 GTISFYTNGAFTDLCRGPHIPNTGYIK-ALKLTSVAGAYWRGNEKNKMLTRIYGISFPKK 178

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRR-K 286
             L +YL  +EE++KRDHRKL ++++LF      G G+  W  KG  +   L  ++R  +
Sbjct: 179 SMLDEYLAMMEEAKKRDHRKLGKDLELFTFSQRVGQGLPLWLPKGAALRDRLEQFLRGVQ 238

Query: 287 IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA 346
            +  Y+++ TP + ++ L+  SGH+  Y  + F       T  +   + LKPMNCP H  
Sbjct: 239 KEYGYQQVITPHIGNKELYVTSGHYAKYGKDSFQ---PIHTPIEGEEYLLKPMNCPHHCE 295

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           ++    +SY+ELPVRLAEFG+VYR E SG LHGL RVRGFTQDDAH+F   +Q+  E  +
Sbjct: 296 IYRSKPRSYKELPVRLAEFGTVYRYEQSGELHGLTRVRGFTQDDAHLFVRPDQLLEEFER 355

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDR 462
           + ++++ I+K   F+    ++S R        +GSD  W+ AE+ +      ++ + +  
Sbjct: 356 VIDIVLYIFKTLKFDNYTAQISLRDPNNKEKYIGSDENWEKAESAI------MQAAKEKG 409

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
           + T V LGE AFYGPK ++++KDAIGR WQ GTIQVD+NLP RF+  Y  +      P+M
Sbjct: 410 LTTVVELGEAAFYGPKLDFMVKDAIGRKWQLGTIQVDYNLPERFDLTYKGADDRLHRPIM 469

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSI 582
           IHRA FGS+ERF+ +++E+  G  PLWLSP Q +V  I+    +YAQ+++  L    +  
Sbjct: 470 IHRAPFGSMERFVAVLLEHTGGKFPLWLSPQQVVVLPISEKFNDYAQKVSEFLNRSDVRT 529

Query: 583 ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL---DAIP 639
           E D RNE I  KIR++ +K+IP ++I G+KE +E  + +R  G     ++SL    D I 
Sbjct: 530 EVDDRNEKIGRKIRDNELKRIPYLLIVGEKEEAEGLVSVRAQGEGDKGQMSLEAFRDFIA 589

Query: 640 ILTKESL 646
            L KE +
Sbjct: 590 GLVKEEI 596


>gi|2191162|gb|AAB61048.1| Similar to threonyl-tRNA synthetase; coded for by A. thaliana cDNA
           R65376 [Arabidopsis thaliana]
          Length = 702

 Score =  582 bits (1499), Expect = e-164,   Method: Composition-based stats.
 Identities = 234/661 (35%), Positives = 359/661 (54%), Gaps = 53/661 (8%)

Query: 3   SDIKLTFPDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIE 60
             IK+T PDG++K       T  D+A  IS+ LA  A+  A++  + D++ P+  +  +E
Sbjct: 73  DPIKVTLPDGNVKEGKKWETTPMDIAAQISKGLANSALISAVDDVLWDMNRPLEGDCKLE 132

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDEL 119
           +   +  +    + HS AHI+ +                   GFYYD F  E   S +  
Sbjct: 133 LFKFDSDKGRDTLWHSSAHILGQ-------------------GFYYDGFYGELGLSDNHF 173

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IE    +      PF +  ++ ++A E+F      +KVE++  +PA   +T+YR G  
Sbjct: 174 PSIEAGAAKAAKEAQPFERIEVTKDQALEMFSENN--FKVELINGLPADMTITVYRCGPL 231

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPH+ +T  VK F K ++ + AYW+GD +R  L R+YG ++  Q++L +YL FLE
Sbjct: 232 VDLCRGPHIPNTSFVKAF-KCLRASSAYWKGDKDRESLQRVYGISYPDQKQLKKYLQFLE 290

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E++K DHR L ++ +LF   +   G  F+   G +++  L+ +++ +     Y E+ TP 
Sbjct: 291 EAKKYDHRLLGQKQELFFSHQLSPGSYFFLPLGTRVYNRLMDFIKNQYWHRGYTEVITPN 350

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           + +  LWQ SGH D+Y+ NMF          + + F LKPMNCPGH  +F H ++SYREL
Sbjct: 351 MYNMELWQTSGHADNYKDNMFTFNI------EKQEFGLKPMNCPGHCLIFQHRVRSYREL 404

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLA+FG ++RNE SG+L GL RVR F QDDAH+FCT EQ+  E   +   I  +YK F
Sbjct: 405 PMRLADFGVLHRNEASGALSGLTRVRRFQQDDAHIFCTTEQVKGEVQGVLEFIDYVYKVF 464

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF   + KLSTRPEK +G    WD AE  +K  ++             +  G+GAFYGPK
Sbjct: 465 GFTYEL-KLSTRPEKYLGDLETWDKAEADLKEAIEAFGKP------LVLNEGDGAFYGPK 517

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC-HPVMIHRAVFGSIERFIGI 537
            +  + DA+ R +QC T+Q+DF LP RFN  Y      K   PVMIHRAV GS+ER   I
Sbjct: 518 IDITVSDAMNRKFQCATLQLDFQLPIRFNLEYAAEDEAKKSRPVMIHRAVLGSVERMFAI 577

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK--- 594
           ++E++KG  P W+SP QAIV  I+  + +YA+++   +K     ++ D  +  I+ K   
Sbjct: 578 LLEHYKGKWPFWISPRQAIVCPISEKSQQYAEKVQKQIKDAGFYVDADLTDRKIDKKVND 637

Query: 595 ----------IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
                     +RE  + +   I++ G+ EA+   + +R   +      S+ D +     +
Sbjct: 638 FGSCSKFCSVVREAQLAQYNYILVVGETEAATGQVSVRVRDNAAHSVKSIEDLLEEFKAK 697

Query: 645 S 645
           +
Sbjct: 698 T 698


>gi|296110556|ref|YP_003620937.1| threonyl-tRNA synthetase [Leuconostoc kimchii IMSNU 11154]
 gi|295832087|gb|ADG39968.1| threonyl-tRNA synthetase [Leuconostoc kimchii IMSNU 11154]
          Length = 654

 Score =  581 bits (1497), Expect = e-163,   Method: Composition-based stats.
 Identities = 234/648 (36%), Positives = 377/648 (58%), Gaps = 26/648 (4%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEI 61
           S++KLTFPDG++K F       +VAESIS+SLAKK+V+  +NG    ++D ++  G  ++
Sbjct: 2   SELKLTFPDGAVKTFAEGTKPLEVAESISKSLAKKSVSAKLNGDYVGMNDSIQSSGDFQL 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSI--WPEVQVAIGPIIEDGFYYDFDKE--QPFSSD 117
           IT  D  +L+++RHS +H++A+A++ I  +  +   +GP I++GFYYD D       S +
Sbjct: 62  ITTSDDEALSLLRHSASHLLAQALKRIPKFSNMHFGVGPFIDNGFYYDTDNGIGNQVSVE 121

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +  +IE  M +I+  D P + + ++ E+A E+     + YK+E++  +P  E +T+  QG
Sbjct: 122 DFPEIEAMMHKIVKEDLPIVSRQVTREEALEM--FASDPYKIELITDLPVDEKITIAIQG 179

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           +  +L +G  V ST  VK F KL  VAGAYWRG S+ PM+ RIYG A   Q ++   +  
Sbjct: 180 DHVELDKGGLVPSTRWVKNF-KLTSVAGAYWRGKSSNPMMQRIYGIAEWKQADVDAEVQR 238

Query: 238 LEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEIN 295
            EE+++RDHR + R++DLF  +++ GSG+  W   G  I + +  Y+  +++ + Y+ + 
Sbjct: 239 REEAKERDHRTIGRDLDLFFTSQEVGSGLPVWLPNGATIRRQVERYITDKELANGYQHVY 298

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP + + +L++ SGHWD YR +MF          D     L+PMNCP H+ VF H  +SY
Sbjct: 299 TPVLSNLNLYKTSGHWDHYREDMFPPMDMG----DGEFLELRPMNCPSHIMVFKHKPRSY 354

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP+R+AE G ++R E SG+L GL RVR  T +D H F   E++  E   I  +++ +Y
Sbjct: 355 RELPIRIAELGMMHRYEKSGALTGLSRVREMTLNDGHTFVEPEKLEEEFKSILTMMMEVY 414

Query: 416 KDFGFEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
           +DF       +LS R      K    D +W+ ++  +K  +D +K      ++     GE
Sbjct: 415 RDFNITDYRFRLSYRDPKNTEKYFDDDEMWEKSQAQLKRAMDDLK------LDYYEAEGE 468

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK-CHPVMIHRAVFGS 530
            AFYGPK +   K A+G +    TIQ+DF LP RFN  Y+ +  +    PVM+HR + G+
Sbjct: 469 AAFYGPKLDVQTKTALGGEETMSTIQLDFLLPERFNLTYIGADGQDNHRPVMLHRGIVGT 528

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNE 589
           +ERF   +IE +KG  P WLSP+Q  +  +  ++  +YA  +   L++  L +  + +  
Sbjct: 529 MERFTAYLIEMYKGAFPTWLSPLQVQIIPVNLAAHGDYANAVQKELQAAGLRVNVEKKEA 588

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
            + Y IRE    K+P  ++ GD E +E+++ IR++G   TQ V+L D 
Sbjct: 589 KMGYLIREAQTNKVPYTLVLGDSEVNEQTVTIRKYGEEKTQTVALADF 636


>gi|302829308|ref|XP_002946221.1| hypothetical protein VOLCADRAFT_102823 [Volvox carteri f.
           nagariensis]
 gi|300269036|gb|EFJ53216.1| hypothetical protein VOLCADRAFT_102823 [Volvox carteri f.
           nagariensis]
          Length = 691

 Score =  581 bits (1497), Expect = e-163,   Method: Composition-based stats.
 Identities = 215/647 (33%), Positives = 353/647 (54%), Gaps = 38/647 (5%)

Query: 3   SDIKLTFPDGSIKNFPVHA-TGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIE 60
           + IK+  PDG  ++      T  D+A+ IS SLAKK V   ++G+  DL  P+  + +++
Sbjct: 52  AQIKVIMPDGKERSAVKGVATPMDIAKEISASLAKKVVVAEVDGQPWDLLRPLEGDCALK 111

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF-DKEQPFSSDEL 119
           + + +D        HS AH++ + ++  +  V + IGP +++GFYYD     +  +  + 
Sbjct: 112 LFSFDDAEGRDAFWHSSAHVLGQVLELEF-GVDLTIGPALDEGFYYDCYMGNRTLAEGDK 170

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           ++IEK+ +  +     F +  +S ++A  +F+     +K+EI++ +PA   +T+YR G  
Sbjct: 171 SRIEKRYEAAVKESQKFQRVVVSRDEALSMFQE--NKFKIEIIQGLPADATITVYRVGPM 228

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLC GPH+ ST  +K    +  ++ A+WRGD  R  L R+YG  +   + L +Y + +E
Sbjct: 229 VDLCSGPHLPSTSYLKAA-AVTSMSRAFWRGDVKREPLQRVYGITFPEPKLLKEYQHRIE 287

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E++KRDHR L  + +LF       G  F+   G +I+ TL+S++R K    +YEE+ TP 
Sbjct: 288 EAKKRDHRVLGVQQELFFFHPLSPGSCFFLPHGARIYNTLMSFIREKYWKYEYEEVITPN 347

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           + +  LW+ SGH D YR NMFA +       +   + LKPMNCPGH  +F +  +SYREL
Sbjct: 348 IYNFDLWRTSGHADHYRENMFAFEI------EKAEYGLKPMNCPGHCLMFANRTRSYREL 401

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLA+FG ++RNE SG+L GL RV                  +E      L+  +Y  F
Sbjct: 402 PLRLADFGVLHRNEFSGALQGLTRV-----------------MSEVQGFLKLLGEVYDVF 444

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           G +  M  LSTRPE  +G   LW+ AE  +   L++            +  G+GAFYGPK
Sbjct: 445 GLDYTMA-LSTRPEGYLGDIELWNRAETALTEALNSTGR------EWVLNPGDGAFYGPK 497

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +  + DA+ R +QC T+Q+DF LP RF   Y +       PV++HRAV GS+ER   I+
Sbjct: 498 IDITVYDALRRKFQCATVQLDFQLPIRFGLEYASESGTLERPVIVHRAVLGSVERMFAIL 557

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
            E+F G  P WL+P Q +V  I+ ++ +YA ++   L++  L ++ D  +  +  K+RE 
Sbjct: 558 TEHFAGKWPFWLNPRQVMVVPISENSSQYAFDVRRELRAAGLHVDVDASDRKMQKKVREA 617

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
            + +   I++ G+ E +E+++ +R   +       L D   ++ +E 
Sbjct: 618 QLAQYNYILVVGEAEKAEQTVNVRTRDNVVHGMFKLEDVRTLMVEER 664


>gi|326780460|ref|ZP_08239725.1| threonyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1]
 gi|326660793|gb|EGE45639.1| threonyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1]
          Length = 658

 Score =  581 bits (1497), Expect = e-163,   Method: Composition-based stats.
 Identities = 262/664 (39%), Positives = 382/664 (57%), Gaps = 38/664 (5%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           SD+++     S +   V  TG+  A  +     +  VA  I G++ DLS  +R+G S+E 
Sbjct: 2   SDVRVIIQRDSEREEHVVTTGTT-AGELFPG-QRTVVAARIGGELKDLSYELRDGESVEP 59

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +       L ++RHS AH+MA+AVQ ++P+ ++ IGP ++DGFYYDFD E+PF+ ++L  
Sbjct: 60  VEISSEDGLNILRHSTAHVMAQAVQELFPDAKLGIGPPVKDGFYYDFDVEKPFTPEDLKA 119

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL------------ESIPAKE 169
           IEKKMQEI  R   F ++ +S E ARE  E   E YK+E++            +      
Sbjct: 120 IEKKMQEIQKRGQKFSRRVVSDEAARE--ELADEPYKLELIGIKGSASSDDGADVEVGGG 177

Query: 170 NVTLYRQGE-------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYG 222
            +T+Y   +       W DLCRGPH+ +T  +  F KLM+ A AYWRG    PML RIYG
Sbjct: 178 ELTIYDNLDPKTGDLCWKDLCRGPHLPTTRFIPAF-KLMRNAAAYWRGSEKNPMLQRIYG 236

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLIS 281
           TAW T+ EL  +L FLEE+ KRDHRKL  E+DLF   ++ G G+  +H KG  I + +  
Sbjct: 237 TAWPTKDELKAHLEFLEEAAKRDHRKLGNELDLFSFPDEIGPGLAVFHPKGGVIRRAMED 296

Query: 282 YMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
           Y RR   ++ YE + +P      L+++SGH D Y   M+     D    D   + LKPMN
Sbjct: 297 YSRRRHEEEGYEFVYSPHATKGKLFEKSGHLDWYADGMYPPMQLD----DGVDYYLKPMN 352

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
           CP H  +F+   +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDDAH++CTKEQM
Sbjct: 353 CPMHNLIFDARGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRSRGFTQDDAHIYCTKEQM 412

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDTIKNSS 459
             E  +    ++++ +D+G     ++LST+  +  VGSD  W++A   ++ V +      
Sbjct: 413 AEELDRTLTFVLNLLRDYGLTDFYLELSTKDPEKYVGSDETWEEATETLRQVAE------ 466

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
           +  +      G  AFYGPK     KDAIGR WQ  T+Q+DFNLP RF+  Y      K  
Sbjct: 467 KQGLPLVPDPGGAAFYGPKISVQCKDAIGRTWQMSTVQLDFNLPERFDLEYTGPDGSKQR 526

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH 579
           PVMIHRA+FGSIERF  +++E++ G  P+WL+P+QA+   I  + + Y QE A   +   
Sbjct: 527 PVMIHRALFGSIERFFAVLLEHYAGAFPVWLAPVQAVGIPIGDAHIPYLQEFAAKARKQG 586

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
           L ++ D  ++ +  KIR     K+P +II GD++ +  ++  R    +    + + +AI 
Sbjct: 587 LRVDVDASSDRMQKKIRNQQKNKVPFMIIAGDEDMANGAVSFRYRDGSQENGIPVDEAIA 646

Query: 640 ILTK 643
            + K
Sbjct: 647 KIAK 650


>gi|300812909|ref|ZP_07093302.1| threonine--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
 gi|300496107|gb|EFK31236.1| threonine--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
          Length = 643

 Score =  580 bits (1496), Expect = e-163,   Method: Composition-based stats.
 Identities = 219/646 (33%), Positives = 359/646 (55%), Gaps = 23/646 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           LT PDGS K F    + +D+A SIS SLAK A+A  ++G++  L   +  +  + I+T +
Sbjct: 5   LTLPDGSKKEFDAAVSVADLASSISTSLAKNALAGKVDGEIKPLDFQLDADHEVAILTNK 64

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L+V+R + A ++   V+  +PE+++    + EDGF+ + DKE      EL  +EK 
Sbjct: 65  DAEGLSVLRATVAFVLEALVKDKYPEIKLGQAEVSEDGFFIETDKEDQIKVTELPDLEKA 124

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           +Q+ I          ++  +  E    K + YK E+L      + V  Y+ G++ D    
Sbjct: 125 LQKAIKNGEAIEHVQVAKSELAE--AFKDDPYKSELLAK--EGDVVNAYKLGDFVDFGFS 180

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
             + +TG++KKF KL+ VAGAYW+G S+ PML RI+GTA+  + +L   L    E ++RD
Sbjct: 181 ALLPNTGKIKKF-KLLSVAGAYWKGKSSNPMLQRIFGTAFFKEADLEADLKRRAEIKERD 239

Query: 246 HRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQH 303
           HR + R++DLF +      G+ +W  KG  I + +  Y+  +++   Y+ + TP +++  
Sbjct: 240 HRTIGRDLDLFFVDPKVGAGLPYWMPKGATIRRIIERYIVDKEVAAGYQHVYTPVLMNLD 299

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
            ++ SGHW  YR +MF          +     L+PMNCP H+ ++ H ++SYRELP+R+A
Sbjct: 300 AYKTSGHWAHYREDMFPPMDMG----EGEMLELRPMNCPSHIQIYKHHIRSYRELPIRIA 355

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           E G ++R E SG+L GL RVR  T +D H F   +Q+  E  +   +I+ +Y DF     
Sbjct: 356 ELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQVQEEFARTLQIIMDVYHDFDINDY 415

Query: 424 MVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
             +LS R  K       +D +W+ +++++K  +D +       ++     GE AFYGPK 
Sbjct: 416 YFRLSYRDPKNTDKYFANDEMWERSQSMLKAAMDDMG------LDYVEAEGEAAFYGPKL 469

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +   K A+G D    TIQ+DF LP RF   Y+ +  E+  PVMIHR + G++ERFI  + 
Sbjct: 470 DIQTKTALGNDETMSTIQLDFMLPERFELSYIGADGEEHRPVMIHRGIVGTMERFIAYLT 529

Query: 540 ENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           E +KG  P WL+P+QA +  +   +  +YA+++ + L +     E DFRNE + YKIRE 
Sbjct: 530 EIYKGAFPTWLAPVQAEIIPVNLDAHSDYAKKVRDELVAKGFRAEIDFRNEKLGYKIRES 589

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
             +K+P  ++ GD E +  ++ +R +G+      SL + +  L+K+
Sbjct: 590 QTQKVPYTLVLGDDEMNAGTVNVRPYGTEEQNSESLAEFMDKLSKD 635


>gi|291165911|gb|EFE27958.1| threonine--tRNA ligase [Filifactor alocis ATCC 35896]
          Length = 655

 Score =  580 bits (1496), Expect = e-163,   Method: Composition-based stats.
 Identities = 229/658 (34%), Positives = 363/658 (55%), Gaps = 21/658 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           +K+T  DGS+K +    +  ++A  IS+ LA+ A A  I+G+V DL   +  +  + I+T
Sbjct: 1   MKVTLKDGSVKEYEGSKSVYEIASDISQGLARVACAGMIDGEVVDLRTVIEQDCELSILT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P D   L  IRH+ +H++AEAV+ ++P+ ++AIGP I+ GFYYD D   PF+ ++L  +E
Sbjct: 61  PTDEEGLRTIRHTASHVLAEAVKRVFPDAKLAIGPAIDTGFYYDIDH-APFTREDLDTLE 119

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE-WFDL 182
           K+M++II  D    K  L  E+A +L E K E YKVE+++ +P    ++ Y+QGE + DL
Sbjct: 120 KEMKKIIKEDEKITKFELPREEAIKLMEEKNEPYKVELIQDLPEDAVISFYQQGEEFIDL 179

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPH+ ST  +K  +KL+  + AYWRGDS++  L RIYGTA+N ++EL  YL +LEE +
Sbjct: 180 CAGPHLMSTKGIK-AYKLISSSMAYWRGDSDKAQLQRIYGTAFNKKEELADYLVYLEEIK 238

Query: 243 KRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEINTPQV 299
           KRDH KL REM+LF      G G+     KG K+   L  ++         Y    TP +
Sbjct: 239 KRDHNKLGREMELFTTVDVIGQGLPLLLPKGTKMVMKLQRWIEDLEDREWGYVRTKTPLM 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGHWD Y+  MF +    D   D   FAL+PM CP    V+ +  KSYR+LP
Sbjct: 299 AKSDLYRISGHWDHYKEGMFVL---GDEEVDKEVFALRPMTCPFQYYVYKNTQKSYRDLP 355

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
            R+ E  +++RNE SG +HGL RVR FT  + H     +Q   E     NL + +    G
Sbjct: 356 YRMGETSTLFRNEDSGEMHGLTRVRQFTISEGHNVVRPDQAEEELQNCLNLAVYVLTTLG 415

Query: 420 FEKIMVKL-----STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            +  +            EK +G ++ W+  +  ++ +L       +  +      GE AF
Sbjct: 416 LQDDVTFRLSKWDPNNREKYLGDESYWETTQEALRNIL------VEKGLPFKEADGEAAF 469

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +   ++  G++    TIQ+D  +   F+ +Y++ + EK  P +IHR   G  ER 
Sbjct: 470 YGPKIDIQARNVYGKEDTMITIQLDCAIAENFDMYYIDQNGEKKRPYIIHRTSLGCYERT 529

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
           +  +IE + G  P WL P Q  +  I+    EYA+E+   L  + + +  D R+E I +K
Sbjct: 530 LAWLIEKYAGKFPTWLCPEQVRILPISDKYAEYAEEVKQELARNGVDVTVDHRSEKIGFK 589

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           IR+  + ++P +++ G+KEAS+R++ +R   +      ++   +  + KE    + +K
Sbjct: 590 IRDARLNRLPYMLVVGEKEASDRTVSVRSRYAGDEGIEAVDSFVDRICKEIRTKEIRK 647


>gi|329768866|ref|ZP_08260294.1| threonyl-tRNA synthetase [Gemella sanguinis M325]
 gi|328837229|gb|EGF86866.1| threonyl-tRNA synthetase [Gemella sanguinis M325]
          Length = 647

 Score =  580 bits (1496), Expect = e-163,   Method: Composition-based stats.
 Identities = 242/650 (37%), Positives = 386/650 (59%), Gaps = 26/650 (4%)

Query: 6   KLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII-- 62
           KL FPDG+++ +    T  ++AESIS SL KK ++  ++    +++ P+  +G +++I  
Sbjct: 3   KLVFPDGNVREYDNK-TPLEIAESISVSLKKKVISAKLDDDYIEVNKPITRDGHLKLIVA 61

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWP-EVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
             ED  SL V+RHS AH++A+A++ ++  +V   +GP I+ GFYYDFD E   + ++   
Sbjct: 62  DDEDQDSLYVLRHSSAHLLAQALRRLYGKDVHFGVGPAIDGGFYYDFDSEYKVTEEDFKN 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK+M++I++ +     + +S  +A E+     + YKVE++  +P  E +T+Y QG++ D
Sbjct: 122 IEKEMKKIVSENIAIEGREVSRSEALEI--FADDPYKVELINDLPEDEVITVYTQGDFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG HV ST ++K+F KL+ VAGAYWRG+S+  ML RIYGTA+ T+  L Q+L+ L+E+
Sbjct: 180 LCRGGHVASTSKIKEF-KLLSVAGAYWRGNSDNKMLQRIYGTAYFTKDHLQQHLHRLQEA 238

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQV 299
            +RDHRKL +E+ +F  ++    G+  W   G  I +T+  Y+  K  +  Y+ + TP +
Sbjct: 239 RERDHRKLGKELGIFTTSQKVGAGLPLWLPNGATIRRTIERYIVDKEVELGYDHVYTPIM 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             + L+  SGHWD Y+ +MF     D       T  L+PMNCP H+ V+ +   SYRELP
Sbjct: 299 GSKDLYITSGHWDHYQEDMFPPMEMDH-----ETMVLRPMNCPHHMMVYKNERHSYRELP 353

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG++ GL RVRG T +DAHVF   +Q+ +E      LI   YKD G
Sbjct: 354 IRIAELGMMHRYEASGAVSGLQRVRGMTLNDAHVFVRPDQLKDEFKLTVGLIQEAYKDLG 413

Query: 420 FEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
            +    +LS R      K    D +W++A+ ++K   D +       ++     GE AFY
Sbjct: 414 IKNFSYRLSYRDPENTEKYFDDDNMWNNAQQMLKETADELG------LDYVEAEGEAAFY 467

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  ++ AIG+     TIQ+DF LP RF   Y+    +   PV+IHR +  ++ER +
Sbjct: 468 GPKLDVQVETAIGKQETLSTIQLDFLLPERFELEYIGEDGKAHRPVVIHRGIVSTMERMV 527

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             ++E +KG+LP WL+P Q  +  + +    +Y++EI   LK   + +  D R+E + YK
Sbjct: 528 AFLLEEYKGDLPTWLAPNQVRIIPVNNDYHYDYSKEIMQELKKAGVKVTIDDRDEKLGYK 587

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IRE + KKIP  ++ GDKE   +++ +R FGS   ++ S ++    + KE
Sbjct: 588 IREAANKKIPYTLVIGDKEVENKAVNVRTFGSHDQKEESFVEFKENILKE 637


>gi|182439796|ref|YP_001827515.1| threonyl-tRNA synthetase [Streptomyces griseus subsp. griseus NBRC
           13350]
 gi|238689023|sp|B1W3F0|SYT_STRGG RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|178468312|dbj|BAG22832.1| putative threonyl-tRNA synthetase [Streptomyces griseus subsp.
           griseus NBRC 13350]
          Length = 658

 Score =  580 bits (1496), Expect = e-163,   Method: Composition-based stats.
 Identities = 263/664 (39%), Positives = 382/664 (57%), Gaps = 38/664 (5%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           SD+++     S +   V  TG+  A  +     +  VA  I G++ DLS  +R+G S+E 
Sbjct: 2   SDVRVIIQRDSEREEHVVTTGTT-AGELFPG-QRTVVAARIGGELKDLSYELRDGESVEP 59

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +       L ++RHS AH+MA+AVQ ++PE ++ IGP ++DGFYYDFD E+PF+ ++L  
Sbjct: 60  VEISSEDGLNILRHSTAHVMAQAVQELFPEAKLGIGPPVKDGFYYDFDVEKPFTPEDLKA 119

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL------------ESIPAKE 169
           IEKKMQEI  R   F ++ +S E ARE  E   E YK+E++            +      
Sbjct: 120 IEKKMQEIQKRGQKFSRRVVSDEAARE--ELADEPYKLELIGIKGSASSDDGADVEVGGG 177

Query: 170 NVTLYRQGE-------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYG 222
            +T+Y   +       W DLCRGPH+ +T  +  F KLM+ A AYWRG    PML RIYG
Sbjct: 178 ELTIYDNLDPKTGDLCWKDLCRGPHLPTTRFIPAF-KLMRNAAAYWRGSEKNPMLQRIYG 236

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLIS 281
           TAW T+ EL  +L FLEE+ KRDHRKL  E+DLF   ++ G G+  +H KG  I + +  
Sbjct: 237 TAWPTKDELKAHLEFLEEAAKRDHRKLGNELDLFSFPDEIGPGLAVFHPKGGVIRRAMED 296

Query: 282 YMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
           Y RR   ++ YE + +P      L+++SGH D Y   M+     D    D   + LKPMN
Sbjct: 297 YSRRRHEEEGYEFVYSPHATKGKLFEKSGHLDWYADGMYPPMQLD----DGVDYYLKPMN 352

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
           CP H  +F+   +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDDAH++CTKEQM
Sbjct: 353 CPMHNLIFDARGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRSRGFTQDDAHIYCTKEQM 412

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDTIKNSS 459
             E  +    ++++ +D+G     ++LST+  +  VGSD  W++A   ++ V +      
Sbjct: 413 AEELDRTLTFVLNLLRDYGLTDFYLELSTKDPEKYVGSDETWEEATETLRQVAE------ 466

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
           +  +      G  AFYGPK     KDAIGR WQ  T+Q+DFNLP RF+  Y      K  
Sbjct: 467 KQGLPLVPDPGGAAFYGPKISVQCKDAIGRTWQMSTVQLDFNLPERFDLEYTGPDGSKQR 526

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH 579
           PVMIHRA+FGSIERF  +++E++ G  P+WL+P+QA+   I  + + Y QE A   +   
Sbjct: 527 PVMIHRALFGSIERFFAVLLEHYAGAFPVWLAPVQAVGIPIGDAHIPYLQEFAAKARKQG 586

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
           L ++ D  ++ +  KIR     K+P +II GD++ +  ++  R    +    + + +AI 
Sbjct: 587 LRVDVDASSDRMQKKIRNQQKNKVPFMIIAGDEDMANGAVSFRYRDGSQENGIPVDEAIA 646

Query: 640 ILTK 643
            + K
Sbjct: 647 KIAK 650


>gi|332653846|ref|ZP_08419590.1| threonine--tRNA ligase [Ruminococcaceae bacterium D16]
 gi|332516932|gb|EGJ46537.1| threonine--tRNA ligase [Ruminococcaceae bacterium D16]
          Length = 589

 Score =  580 bits (1496), Expect = e-163,   Method: Composition-based stats.
 Identities = 250/590 (42%), Positives = 357/590 (60%), Gaps = 16/590 (2%)

Query: 55  REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPF 114
            E   E  T E+P       H+C+H+MA+AV+ +WPEV++AIGP I++G+YYD D    F
Sbjct: 3   EENKNEF-TFENPEYRQTYWHTCSHVMAQAVKRLWPEVKLAIGPSIDEGWYYDMDAPFAF 61

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
           + + L QIE +M++I        +  L   +A +  E K E YKVE++  +P   +++ Y
Sbjct: 62  TPEHLEQIEAEMKKICKEKLKLERFELPRAEALKFMEEKGEPYKVELINDLPEDAHISFY 121

Query: 175 RQGEWFDLCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQ 233
           +QGE+ DLC GPH+ STG++K    KL     AYWRGDSNR  L RIYG A+  + EL  
Sbjct: 122 KQGEFTDLCAGPHLDSTGRIKGNALKLTACNAAYWRGDSNRETLQRIYGIAFPKKDELDA 181

Query: 234 YLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYE 292
           YL  +EE++KRDHRKL +E+ LF + ++G G  F+  KG  +  TL+ Y R+   K  Y 
Sbjct: 182 YLQRIEEAKKRDHRKLGKELGLFMLRDEGPGFPFFLPKGMTLKNTLLDYWRQIHKKYGYV 241

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           EI+TP +L++ LW++SGHWD Y+ NM+       T+ D   FA+KPMNCPG + V+    
Sbjct: 242 EISTPIILNRQLWERSGHWDHYKQNMYT------TVIDGEDFAIKPMNCPGGMLVYASEP 295

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
            SYRELP+R+ E G V+R+E SG+LHGL RVR F+QDDAHVF T+EQM +   +   L  
Sbjct: 296 HSYRELPLRVGEIGLVHRHELSGALHGLFRVRCFSQDDAHVFMTREQMKDVIQETVRLFD 355

Query: 413 SIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
            +Y  FG    + +LST PE  +G+   W+  ++I+K  +  +           +  G+G
Sbjct: 356 EVYSTFGLSYTI-ELSTMPEDHIGTVEEWEHNQDILKNAITDMGK------EFVINEGDG 408

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           AFYGPK ++ L D++GR WQCGTIQ+D  LP RF   Y     +K  PVMIHR V GSIE
Sbjct: 409 AFYGPKLDFHLADSLGRTWQCGTIQLDSQLPERFELEYTGEDGQKHRPVMIHRVVLGSIE 468

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
           RFIG++ E+F G  P WL+P+Q  +  +T  A  YA +++  L      +ETD RNE I 
Sbjct: 469 RFIGVITEHFAGAFPAWLAPVQVKILPVTDRAAAYADQLSKQLDEAGYRVETDHRNEKIG 528

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            KIRE +++KIP +I+ GD++    ++ +R         +SL D    L 
Sbjct: 529 KKIREATMEKIPYMIVVGDRDMENNTVSVRLRTGEDLGAMSLADFTAKLK 578


>gi|29833364|ref|NP_827998.1| threonyl-tRNA synthetase [Streptomyces avermitilis MA-4680]
 gi|73919829|sp|Q827U8|SYT_STRAW RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|29610487|dbj|BAC74533.1| putative threonyl-tRNA synthetase [Streptomyces avermitilis
           MA-4680]
          Length = 658

 Score =  580 bits (1496), Expect = e-163,   Method: Composition-based stats.
 Identities = 260/664 (39%), Positives = 382/664 (57%), Gaps = 38/664 (5%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEI 61
           SD+++     S +   V  TG+  A+       +  VA  + G++ DL+  V++G  +E 
Sbjct: 2   SDVRVIIQRDSEREERVVTTGTTAADLFPGE--RTVVAARVGGELKDLAYEVKDGEEVEP 59

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +       L ++RHS AH+MA+AVQ ++PE ++ IGP ++DGFYYDFD  +PF+ ++L  
Sbjct: 60  VQISSEDGLNILRHSTAHVMAQAVQELFPEAKLGIGPPVKDGFYYDFDVAKPFTPEDLKA 119

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIP------------AKE 169
           IEKKMQEI  R   F ++ ++ E ARE  E   E YK+E++                   
Sbjct: 120 IEKKMQEIQKRGQRFSRRVVTDEAARE--ELADEPYKLELIGIKGSASNDDGANVEVGSG 177

Query: 170 NVTLYRQGE-------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYG 222
            +T+Y   +       W DLCRGPH+ +T  +  F KLM+ A AYWRG    PML RIYG
Sbjct: 178 ELTIYDNLDAKTGDLCWKDLCRGPHLPTTRNIPAF-KLMRNAAAYWRGSEKNPMLQRIYG 236

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLIS 281
           TAW ++ EL  +L FL E+EKRDHRKL  E+DLF I  + GSG+  +H KG  + + +  
Sbjct: 237 TAWPSKDELKAHLDFLAEAEKRDHRKLGNELDLFSIPDQIGSGLAVFHPKGGIVRRVMED 296

Query: 282 YMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
           Y RR   ++ YE + TP      L++ SGH D Y   M+     D    +   + LKPMN
Sbjct: 297 YSRRRHEEEGYEFVYTPHATKGKLFETSGHLDWYADGMYPPMQLD----EGVDYYLKPMN 352

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
           CP H  +F+   +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDDAH++CT+E+M
Sbjct: 353 CPMHNLIFDARGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYCTREKM 412

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDTIKNSS 459
            +E  K    ++++ +D+G     ++LST+  +  VGSD +W++A   ++ V +      
Sbjct: 413 ADELDKTLTFVLNLLRDYGLTDFYLELSTKDPEKFVGSDEVWEEATETLRQVAE------ 466

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
           +  +      G  AFYGPK     KDAIGR WQ  T+Q+DFNLP RF+  Y      K  
Sbjct: 467 KQGLPLVPDPGGAAFYGPKISVQAKDAIGRTWQMSTVQLDFNLPERFDLEYTGPDGSKQR 526

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH 579
           PVMIHRA+FGSIERF  +++E++ G  P WL+P+QA+   I  + VEY Q+ A   K   
Sbjct: 527 PVMIHRALFGSIERFFAVLLEHYAGAFPAWLAPVQAVGIPIGDAHVEYLQKFAAEAKKKG 586

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
           L +E D  ++ +  KIR    +K+P ++I GD++ +  ++  R    +    + L +AI 
Sbjct: 587 LRVEVDSSSDRMQKKIRNAQKQKVPFMVIAGDEDMTAGAVSFRYRDGSQENGIPLDEAIA 646

Query: 640 ILTK 643
            + K
Sbjct: 647 KIAK 650


>gi|313124186|ref|YP_004034445.1| threonyl-tRNA synthetase 1 [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
 gi|312280749|gb|ADQ61468.1| Threonyl-tRNA synthetase 1 [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
          Length = 643

 Score =  580 bits (1495), Expect = e-163,   Method: Composition-based stats.
 Identities = 221/646 (34%), Positives = 360/646 (55%), Gaps = 23/646 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           LT PDGS K F V  + +D+A SIS SLAK AVA  ++G++  L   +  +  + I+T +
Sbjct: 5   LTLPDGSKKEFDVAVSVADLASSISTSLAKNAVAGKVDGEIKPLDFQLDADHEVAILTNK 64

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L+V+R + A ++   V+  +PE+++    + EDGF+ + DKE      EL  +EK 
Sbjct: 65  DAEGLSVLRATVAFVLEALVKDKYPEIKLGQAEVSEDGFFIETDKEDQIKVTELPDLEKA 124

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           +Q+ I          ++  +  E    K + YK E+L      + V  Y+ G++ D    
Sbjct: 125 LQKAIKNGEAIEHVQVAKSELAE--AFKDDPYKSELLAK--EGDVVDAYKLGDFVDFGFS 180

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
             + +TG++KKF KL+ VAGAYW+G S+ PML RI+GTA+  + +L   L    E ++RD
Sbjct: 181 ALLPNTGKIKKF-KLLSVAGAYWKGKSSNPMLQRIFGTAFFKEADLEADLKRRAEIKERD 239

Query: 246 HRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQH 303
           HR + R++DLF +      G+ +W  KG  I + +  Y+  +++   Y+ + TP +++  
Sbjct: 240 HRTIGRDLDLFFVDPKVGAGLPYWMPKGATIRRIIERYIVDKEVAAGYQHVYTPVLMNLD 299

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
            ++ SGHW  YR +MF          +     L+PMNCP H+ ++ H ++SYRELP+R+A
Sbjct: 300 AYKTSGHWAHYREDMFPPMDMG----EGEMLELRPMNCPSHIQIYKHHIRSYRELPIRIA 355

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           E G ++R E SG+L GL RVR  T +D H F   +Q+  E  +   +I+ +Y DF     
Sbjct: 356 ELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQVQEEFARTLQIIMDVYHDFDINDY 415

Query: 424 MVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
             +LS R  K       +D +W+ +++++K  +D +       ++     GE AFYGPK 
Sbjct: 416 YFRLSYRDPKNTDKYFANDEMWERSQSMLKAAMDDMG------LDYVEAEGEAAFYGPKL 469

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +   K A+G D    TIQ+DF LP RF   Y+ +  E+  PVMIHR + G++ERFI  + 
Sbjct: 470 DIQTKTALGNDETMSTIQLDFMLPERFELSYIGADGEEHRPVMIHRGIVGTMERFIAYLT 529

Query: 540 ENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           E +KG  P WL+P+QA +  +   +  +YA+++ + L +     E DFRNE + YKIRE 
Sbjct: 530 EIYKGAFPTWLAPVQAEIIPVNLDAHSDYAKKVRDELVAKGFRAEIDFRNEKLGYKIRES 589

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
             +K+P  ++ GD E +  ++ +R +G+      SL + +  L+K+
Sbjct: 590 QTQKVPYTLVLGDDEMNAGTVNVRPYGTEEQNSESLAEFMDKLSKD 635


>gi|291542490|emb|CBL15600.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Ruminococcus
           bromii L2-63]
          Length = 648

 Score =  580 bits (1495), Expect = e-163,   Method: Composition-based stats.
 Identities = 212/651 (32%), Positives = 347/651 (53%), Gaps = 19/651 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +    G++K F    T +++A+SI   L K      ++G +CDL  P+ ++  +E++
Sbjct: 1   MINVELKGGAVKEFENGTTPAEIAKSIGAGLYKSVCCAKVDGDLCDLRTPLGKDCKVELL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T ++        H+ +H++A+AV+ ++P  + AIGP +++GFYYDFD E+PFS ++L +I
Sbjct: 61  TFDNVDGQKTFWHTASHVLAQAVKRLYPNAKCAIGPAVDNGFYYDFDVEKPFSPEDLEKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPA-KENVTLYRQGEWFD 181
           + +M++I+       +  LS E+A +  E   E YKVE+++      E++T Y+QGE+ D
Sbjct: 121 KAEMKKIVKSGLELERVELSPEEAEKKLEEMNEPYKVELVKEHSDKGEHITFYKQGEFID 180

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LC GPH+ S   +K   +L    GAYWRGD+N   L R+YG A+     L ++L  LEE+
Sbjct: 181 LCAGPHLMSVAPIK-AIELTACTGAYWRGDANNAQLCRVYGVAFPKASMLEEHLKKLEEA 239

Query: 242 EKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           + RDH KL RE++ F      G G+     KG ++ Q L  ++   +         TP +
Sbjct: 240 KLRDHNKLGRELEYFTTVDYVGQGLPILLPKGARVVQLLQRWVEDVEQSKGCLLTKTPLL 299

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             + L++ SGHWD Y   MF +    D   +   FAL+PM CP    V+ +  +SYR+LP
Sbjct: 300 AKRDLYKISGHWDHYLDGMFVLGDPHDE--EKECFALRPMTCPFQYQVYLNKQRSYRDLP 357

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +RL E  +++RNE SG +HGL+RVR FT  + H     +Q+  E      L        G
Sbjct: 358 MRLTETSTLFRNEASGEMHGLIRVRQFTISEGHYILRPDQLEQEFKGCLELAKYFLDTVG 417

Query: 420 FEKIM------VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
             +             +  K  G+   W++++ +MK +LD +       ++  + + E A
Sbjct: 418 LLENCTFRFSQWDPENKNNKYEGTKEQWEESQAVMKTILDDL------DVDYEIGIDEAA 471

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +   K+  G++    TIQ+D  L  RF  +Y++   +K  P +IHR   G  ER
Sbjct: 472 FYGPKLDIQYKNVFGKEDTIVTIQIDMLLAERFGMYYIDKDGQKKLPYIIHRTSLGCFER 531

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
            +  MIE F G +PLWL+P Q  +  I    VEYAQ IA+ L S  + +  D R+E I  
Sbjct: 532 TLAYMIERFAGVMPLWLAPEQIRLLPIKEGNVEYAQGIADRLTSLGMRVTVDSRDENIGP 591

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KI+   +++IP I++ GD E +  ++ +R         + + + + ++  E
Sbjct: 592 KIKAARLERIPYILVIGDNEMNSSTVTVRSRKRGEIPNMPVDEFVALVKNE 642


>gi|312077291|ref|XP_003141239.1| threonyl-tRNA synthetase [Loa loa]
 gi|307763596|gb|EFO22830.1| threonyl-tRNA synthetase [Loa loa]
          Length = 681

 Score =  580 bits (1495), Expect = e-163,   Method: Composition-based stats.
 Identities = 217/648 (33%), Positives = 350/648 (54%), Gaps = 27/648 (4%)

Query: 2   PSDIKLTFPDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
              I++T PDG +        T   +AE ISR  A  AV   +NG+V DL  P   + ++
Sbjct: 40  SEKIEITLPDGKVLGGESWRTTPLMIAEQISRGFADSAVVAKVNGEVWDLDRPFECDATL 99

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDE 118
           +I+  +D     V  HS AHIM EA++  +    +  GP I +GFYYD  KE    + D+
Sbjct: 100 QILKFDDDEGKQVFWHSSAHIMGEAMER-YCGGHLCYGPPILEGFYYDMWKEGSAITPDD 158

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
             ++E+ ++ ++    PF +  +S E   ++F+     +KV I+         T+YR G 
Sbjct: 159 FPKLEQIIKCVVKDKQPFERLVVSKEDLLQMFKY--NKFKVRIINEKITTPFTTVYRCGP 216

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLCRGPHVR TG+VK    ++K + +YW G S+   L RIYG ++   ++L ++    
Sbjct: 217 LIDLCRGPHVRHTGKVK-ALSVIKTSSSYWEGRSDAESLIRIYGISFPDSKQLKEWQRLQ 275

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
           EE+ KRDHRK+ R+ +L+       G  FW+ KG  I+ +L +++R++ +   + E+ +P
Sbjct: 276 EEAAKRDHRKIGRDQELYFFHPLSPGSAFWYPKGAHIYNSLCNFIRKEYRKRGFTEVISP 335

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  LW+QSGHW+ Y  NMF +        +  TF LKPMNCPGH  +++H  +++ E
Sbjct: 336 NMYNSKLWEQSGHWEHYSDNMFKI------DIEKETFGLKPMNCPGHCLMYSHMPRTHNE 389

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R A+FG ++R +    +  +     F QDDAH+FC ++Q+  E +   + +   Y D
Sbjct: 390 LPLRYADFGVLHRKKTVEEITII-----FQQDDAHIFCRQDQVVEEIMNCIDFLKYAYND 444

Query: 418 -FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
            FGF   +   +      +G    W+ AE+ +K  L+   +  +      +  G+GAFYG
Sbjct: 445 VFGFTFKLNLSTRPEVGYLGDIETWNSAEDKLKEALNASGHKWE------LNPGDGAFYG 498

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK +  ++DA+ R  QC TIQ+DF LP RF+  Y + +SE+  PVMIHRA+ GSIER   
Sbjct: 499 PKIDITIQDALRRLHQCATIQLDFQLPIRFDLSYFDENSERQRPVMIHRALLGSIERMTA 558

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FRNETINYKI 595
           I+ EN+ G  P WLSP QA V T+  S  +Y + +   +      +E D   ++T+N +I
Sbjct: 559 ILAENYGGKWPFWLSPRQAKVITVHESQNDYGRVVQRKIYEAGFEVEFDADSSDTLNKQI 618

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           R   + +   I++ G  EA   ++ +R   +    ++ L D I    +
Sbjct: 619 RNAQLAQFNFILVVGPTEARNGTVNVRTRDNAVRGEIKLEDLIEKFKR 666


>gi|282864200|ref|ZP_06273256.1| threonyl-tRNA synthetase [Streptomyces sp. ACTE]
 gi|282560687|gb|EFB66233.1| threonyl-tRNA synthetase [Streptomyces sp. ACTE]
          Length = 658

 Score =  580 bits (1494), Expect = e-163,   Method: Composition-based stats.
 Identities = 256/664 (38%), Positives = 378/664 (56%), Gaps = 38/664 (5%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI-EI 61
           SD+++     S +   V  TG+  AE       +  VA  ++G++ DL+   ++G + E 
Sbjct: 2   SDVRVIIQRDSEREEHVVTTGTTAAELFPGQ--RTVVAARVDGELRDLAYAPKDGEVVEP 59

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +       L ++RHS AH+MA+AVQ ++PE ++ IGP ++DGFYYDFD E+PF+ ++L  
Sbjct: 60  VEITSEDGLDILRHSTAHVMAQAVQELFPEAKLGIGPPVKDGFYYDFDVERPFTPEDLKA 119

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL------------ESIPAKE 169
           +EKKMQEI  R   F ++ ++ E AR   E   E YK+E++            +      
Sbjct: 120 VEKKMQEIQKRGQRFSRRVVTDEAARA--ELADEPYKLELIGIKGSASSDDGADVEVGGG 177

Query: 170 NVTLYRQGE-------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYG 222
            +T+Y   +       W DLCRGPH+ +T  +  F KLM+ A AYWRG    PML RIYG
Sbjct: 178 ELTIYDNLDPKTGDLCWKDLCRGPHLPTTRFIPAF-KLMRNAAAYWRGSEKNPMLQRIYG 236

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLIS 281
           TAW T+ +L  +L FLEE+ KRDHRKL  E+DLF   ++ G G+  +H KG  I + +  
Sbjct: 237 TAWPTKDQLKAHLEFLEEAAKRDHRKLGNELDLFSFPDEIGPGLAVFHPKGGVIRRAMED 296

Query: 282 YMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
           Y RR   ++ YE + +P      L+++SGH D Y   M+     D    D   + LKPMN
Sbjct: 297 YSRRRHEEEGYEFVYSPHATKGKLFEKSGHLDWYADGMYPPMQLD----DGVDYYLKPMN 352

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
           CP H  +F+   +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDDAH++CT+EQM
Sbjct: 353 CPMHNLIFDARGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRSRGFTQDDAHIYCTREQM 412

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDTIKNSS 459
             E  +    ++++ +D+G     ++LST+  +  VGSD  W++A   ++ V +      
Sbjct: 413 AEELDRTLTFVLNLLRDYGLTDFYLELSTKDPEKFVGSDEAWEEATETLRQVAE------ 466

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
           +  +      G  AFYGPK     KDAIGR WQ  T+Q+DFNLP RF+  Y      K  
Sbjct: 467 KQGLPLVPDPGGAAFYGPKISVQCKDAIGRTWQMSTVQLDFNLPERFDLEYTGPDGTKQR 526

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH 579
           PVMIHRA+FGSIERF  +++E++ G  P+WL+P+QA+   I  + + Y QE A   +   
Sbjct: 527 PVMIHRALFGSIERFFAVLLEHYAGAFPVWLAPVQAVGIPIGDTHIPYLQEFAAEARKKG 586

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
           L +E D  ++ +  KIR H   K+P ++I GD + +  ++  R    +    +   +AI 
Sbjct: 587 LRVEVDASSDRMQKKIRNHQKAKVPFMVIVGDDDMNAGTVSFRHRDGSQENGIPRDEAIA 646

Query: 640 ILTK 643
            L  
Sbjct: 647 KLVD 650


>gi|160878906|ref|YP_001557874.1| threonyl-tRNA synthetase [Clostridium phytofermentans ISDg]
 gi|160427572|gb|ABX41135.1| threonyl-tRNA synthetase [Clostridium phytofermentans ISDg]
          Length = 652

 Score =  580 bits (1494), Expect = e-163,   Method: Composition-based stats.
 Identities = 223/656 (33%), Positives = 354/656 (53%), Gaps = 18/656 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K+T  DGS+K +       D+A+ IS  LA+ A A  ++GKV DL   V ++  + I+T
Sbjct: 1   MKITLKDGSVKEYSESMQIIDIAKDISEGLARMACAAELDGKVVDLRTEVSKDAELSILT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
             D    A  RH+ +H++A+AV+ ++P+ ++AIGP I+ GFYYDFD   PF    L  +E
Sbjct: 61  FNDDGGKAAYRHTTSHVLAQAVKRLYPDAKIAIGPSIDTGFYYDFDV-APFDRAALDALE 119

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           ++M++II   +   +  L   +A +  E K+E YKVE++  +P    ++ Y QG++ DLC
Sbjct: 120 QEMKKIIKEGAEITRFTLPRAEAIKFMEEKEEPYKVELIRDLPEDSVISFYSQGDFVDLC 179

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+ ST  +K   KL+  +GAYWRG     ML+R+YGTA+    +L ++L  LE+ +K
Sbjct: 180 AGPHLMSTKNIK-AIKLINSSGAYWRGSEKNKMLTRVYGTAFTKNADLEEFLNHLEDIKK 238

Query: 244 RDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLD 301
           RDH KL REM+LF  +   G G+     KG K+ QTL  ++   + +  Y    TP +  
Sbjct: 239 RDHNKLGREMELFATVDVIGQGLPLLMPKGAKMIQTLQRWIEDEEERRGYMRTKTPLLAK 298

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + L++ S HW+ Y+  MF +   D+  ++   FAL+PM CP    V+    KSYR+LP R
Sbjct: 299 KDLYEISDHWNHYKEGMFVL--GDEEDENAEVFALRPMTCPFQYYVYKQSQKSYRDLPCR 356

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
             E  +++RNE SG +HGL RVR FT  + H+  T EQ+  E     +L        G  
Sbjct: 357 YGETSTLFRNEDSGEMHGLTRVRQFTISEGHLIVTPEQLEEEFKGCVDLAKYCLTTLGLA 416

Query: 422 KIMVKL-----STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
             +             K +G++  W+  +N+M+ +L+ I       ++     GE AFYG
Sbjct: 417 DDVTYRLSKWDPNNQGKYLGNEETWNKVQNMMRDILNHIG------LDFTEEDGEAAFYG 470

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK +   K+  G++    TIQ+D  L  RF+  Y++++ EK  P +IHR   G  ER + 
Sbjct: 471 PKLDIQAKNVYGKEDTMITIQLDMFLADRFDMTYIDANGEKKRPYIIHRTSMGCYERTLA 530

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
            +IE + G  P WL P Q  +  I+    +YA+ +   L  + + +  D R E I YKIR
Sbjct: 531 WLIEKYAGKFPTWLCPEQVRILPISEKYSDYAKMVEKELLDNGVLVTVDNRAEKIGYKIR 590

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           E  + ++P +++ G KEA E  + +R        +  + D +  + KE    + +K
Sbjct: 591 EARLDRVPYMLVVGQKEAEEGLVSVRSRYLGDEGQKKVSDFVDAICKEIRTKEIRK 646


>gi|29840712|ref|NP_829818.1| threonyl-tRNA synthetase [Chlamydophila caviae GPIC]
 gi|33301681|sp|Q821I3|SYT_CHLCV RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|29835062|gb|AAP05696.1| threonyl-tRNA synthetase [Chlamydophila caviae GPIC]
          Length = 635

 Score =  580 bits (1494), Expect = e-163,   Method: Composition-based stats.
 Identities = 255/645 (39%), Positives = 379/645 (58%), Gaps = 22/645 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEII 62
            I++   + ++   P  AT +D A  I  S     V   IN ++ DLS  + EG ++  +
Sbjct: 1   MIRVICNNETV-ELPKGATAADFASKIKNSHYFAGVV--INDQIKDLSTTLNEGDTLRFV 57

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T ED     +  H+ AHI+A+AV  +WP+    IGP+I  GFYYDF      S ++L  I
Sbjct: 58  TFEDSEGREIFLHTSAHILAQAVLRLWPQAVPTIGPVINQGFYYDFA-NLSVSEEDLLAI 116

Query: 123 EKKMQEIIARDSPFLKQYLS-HEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           E  M++I+       K+  +  E+A +  E    A+K E+++ +P  E++T Y QGE+ D
Sbjct: 117 ENMMEQIVQEKLEVSKKTFNGKEEALK--EFMHNAFKAELIQELPEGESITAYSQGEFMD 174

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ ST  VK F KL++ + AYWRGD +R  L RIYG ++ T +EL ++L+ LEE+
Sbjct: 175 LCRGPHLPSTAPVKAF-KLLRTSAAYWRGDPSRESLVRIYGISFPTTKELKEHLHQLEEA 233

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           +KRDHR L  ++DLF   E  +G+ F+H +G  ++  LI Y +R      Y++I TPQ++
Sbjct: 234 KKRDHRVLGAKLDLFSQQECSAGMPFFHPRGMIVWDALIGYWQRLHQLAGYKQILTPQLM 293

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++ LW+ SGHW +Y+ANM+ +K       D   +A+KPMNCPG +  +   L SY+E P+
Sbjct: 294 NRSLWETSGHWSNYKANMYTLKI------DEEDYAIKPMNCPGCMLYYKTRLHSYKEFPL 347

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G V+R E SG+L GLMRVR F QDDAHVF T EQ+  E L I NL+  +Y  FG 
Sbjct: 348 RIAEIGHVHRYEVSGALSGLMRVRAFHQDDAHVFLTPEQVEEETLNILNLVSELYSTFGL 407

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           E  +   +   +  +GSD LW+ A + ++  L              +  G+GAFYGPK +
Sbjct: 408 EYHLELSTRPEKDTIGSDELWELATSALERALINSNTP------FIINPGDGAFYGPKID 461

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
             +KDAI R WQCGTIQ+D  LP RF   Y N+  EK  P+M+HRA+FGSIERF+GI+IE
Sbjct: 462 IHVKDAIQRTWQCGTIQLDMFLPERFELEYTNAQGEKSTPIMLHRALFGSIERFLGILIE 521

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +FKG  PLWLSP    + T+      +A+E+A   +   L +  D  NE+++ KIR    
Sbjct: 522 HFKGKFPLWLSPEHIRLITVADRHQPHAKELAAAWQKLGLVVTVDDSNESVSKKIRNAQN 581

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
            ++  ++  GD+E  E ++ IR   +     +++   I  + +E 
Sbjct: 582 MQVNYMVTLGDREIEENTLAIRTRDNRVLNAMTVETFINTILEEK 626


>gi|116670864|ref|YP_831797.1| threonyl-tRNA synthetase [Arthrobacter sp. FB24]
 gi|166223319|sp|A0JXC7|SYT_ARTS2 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|116610973|gb|ABK03697.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Arthrobacter
           sp. FB24]
          Length = 669

 Score =  580 bits (1494), Expect = e-163,   Method: Composition-based stats.
 Identities = 248/675 (36%), Positives = 375/675 (55%), Gaps = 45/675 (6%)

Query: 1   MPSDIKLTFP-DGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS- 58
           M    ++T   DG         TG+++         +  V   +NG++ DL  P+ EG+ 
Sbjct: 1   MSDAQQITLIVDGEETKVTTGTTGAELFFE-----RRDVVVARVNGELKDLDQPLPEGAD 55

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           IE +T + P  L V+RHS AH+MA+AVQ + P+ ++ IGP I DGFY+DFD  +PF+ ++
Sbjct: 56  IEGVTIDSPDGLNVLRHSTAHVMAQAVQQLRPDAKLGIGPYITDGFYFDFDVAEPFTPED 115

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIP------------ 166
           L  +EK M +II ++  F+++ +S ++ARE  +   E YK+E+L                
Sbjct: 116 LKALEKMMLKIINQNQKFVRRVVSEDEAREAMK--NEPYKLELLGKKNNAADAGEGVNVE 173

Query: 167 -AKENVTLYRQGE-------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLS 218
               ++T+Y   +       W DLCRGPH+ +T  +   F L + + AYW G+ N   L 
Sbjct: 174 VGAGDITIYDNVDRKSGDSVWCDLCRGPHLPNTKLISNAFALTRSSAAYWLGNQNNQQLQ 233

Query: 219 RIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQ 277
           RIYGTAW T+  L  Y   + E+E+RDHRKL  E+DLF   ++ GSG+  +H KG  I +
Sbjct: 234 RIYGTAWPTKDALKAYQERIAEAERRDHRKLGAELDLFSFPDELGSGLPVFHPKGGIIRK 293

Query: 278 TLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD------ 330
            +  Y R R +   Y+ + TP +   HL++ SGH D Y+  MF     D  + +      
Sbjct: 294 AMEDYSRQRHVDAGYDFVYTPHITKGHLYEVSGHLDWYKEGMFPAMHIDAELNEDGTVRK 353

Query: 331 -LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
             + + LKPMNCP H  +F    +SYRELP+RL EFGSVYR E SG +HGL RVRG TQD
Sbjct: 354 PGQDYYLKPMNCPMHNLIFRSRGRSYRELPLRLFEFGSVYRYEKSGVVHGLTRVRGMTQD 413

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLS-TRPEKRVGSDALWDDAENIM 448
           DAH++CT+EQM +E     N ++ + KD+G +   ++LS    +K VG DA WD+A   +
Sbjct: 414 DAHIYCTREQMKDELTTTLNFVLGLLKDYGLDDFYLELSTKNEDKFVGDDATWDEATRTL 473

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
             V +         +      G  AFYGPK     KDA+GR WQ  TIQ+DFNLP RF  
Sbjct: 474 AEVAEASG------LELIPDPGGAAFYGPKISVQAKDALGRTWQMSTIQLDFNLPERFEL 527

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYA 568
            +  +   +  PVMIHRA+FGS+ERF+G++ E++ G  P WL+P+Q +   +  +  +Y 
Sbjct: 528 EFQAADGTRQRPVMIHRALFGSVERFMGVLTEHYAGAFPAWLAPVQVVGIPVAEAFNDYM 587

Query: 569 QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
            ++ + LK+  +  E D  ++    KIR  S  KIP ++I G ++A   ++  R    + 
Sbjct: 588 FDVVDQLKAVGIRAEVDISSDRFPKKIRTASKDKIPFVLIAGGEDAEAGAVSFRFRDGSQ 647

Query: 629 TQKVSLLDAIPILTK 643
              V + +A+  + +
Sbjct: 648 DNGVPVAEAVQRIVE 662


>gi|320011858|gb|ADW06708.1| threonyl-tRNA synthetase [Streptomyces flavogriseus ATCC 33331]
          Length = 658

 Score =  579 bits (1493), Expect = e-163,   Method: Composition-based stats.
 Identities = 259/664 (39%), Positives = 382/664 (57%), Gaps = 38/664 (5%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI-EI 61
           SD+++     S +   V  TG+  AE       +  VA  + G++ DL+  +++G + E 
Sbjct: 2   SDVRVIIQRDSEREEHVVTTGTTAAELFPGQ--RTVVAARVGGELRDLAYELKDGEVVEP 59

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +       L ++RHS AH+MA+AVQ + PE ++ IGP ++DGFYYDFD E+PF+ ++L  
Sbjct: 60  VEISSEDGLNILRHSTAHVMAQAVQELHPEAKLGIGPPVKDGFYYDFDVEKPFTPEDLKA 119

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL------------ESIPAKE 169
           IEKKMQEI  R   F ++ ++ E ARE  E   E YK+E++            +      
Sbjct: 120 IEKKMQEIQKRGQRFSRRVVTDEAARE--ELADEPYKLELIGIKGSASSDDGADVEVGGG 177

Query: 170 NVTLYRQGE-------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYG 222
            +T+Y   +       W DLCRGPH+ +T  +  F KLM+ A AYWRG    PML RIYG
Sbjct: 178 ELTIYDNLDAKTGDLCWKDLCRGPHLPTTRFIPAF-KLMRNAAAYWRGSEKNPMLQRIYG 236

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLIS 281
           TAW T+ EL  +L FLEE+ KRDHRKL  E+DLF   ++ G G+  +H KG  I + +  
Sbjct: 237 TAWPTKDELKAHLEFLEEAAKRDHRKLGNELDLFSFPDEIGPGLAVFHPKGGVIRRAMED 296

Query: 282 YMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
           Y RR   ++ YE + +P      L+++SGH D Y   M+     D    D   + LKPMN
Sbjct: 297 YSRRRHEEEGYEFVYSPHATKGKLFEKSGHLDWYADGMYPPMQLD----DGVDYYLKPMN 352

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
           CP H  +F+   +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDDAH++CTKEQM
Sbjct: 353 CPMHNLIFDARGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRSRGFTQDDAHIYCTKEQM 412

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDTIKNSS 459
             E  +    ++++ +D+G     ++LST+  +  VGSD +W++A   ++ V +      
Sbjct: 413 AEELDRTLTFVLNLLRDYGLTDFYLELSTKDPEKFVGSDEIWEEATETLRQVAE------ 466

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
           +  +      G  AFYGPK     KDAIGR WQ  T+Q+DFNLP RF+  Y      K  
Sbjct: 467 KQGLPLVPDPGGAAFYGPKISVQCKDAIGRTWQMSTVQLDFNLPERFDLEYTGPDGTKQR 526

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH 579
           PVMIHRA+FGSIERF  +++E++ G  P+WL+P+QA+   I  + + Y QE A   +   
Sbjct: 527 PVMIHRALFGSIERFFAVLLEHYAGAFPVWLAPVQAVGIPIGDTHIPYLQEFAAKARKQG 586

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
           L ++ D  ++ +  KIR    +K+P +II GD++ +  ++  R    +    + + +AI 
Sbjct: 587 LRVDVDASSDRMQKKIRNQQKQKVPFMIIAGDEDMANGAVSFRYRDGSQENGIPVDEAIA 646

Query: 640 ILTK 643
            + K
Sbjct: 647 KIAK 650


>gi|227432351|ref|ZP_03914343.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Leuconostoc
           mesenteroides subsp. cremoris ATCC 19254]
 gi|227351872|gb|EEJ42106.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Leuconostoc
           mesenteroides subsp. cremoris ATCC 19254]
          Length = 652

 Score =  579 bits (1493), Expect = e-163,   Method: Composition-based stats.
 Identities = 235/648 (36%), Positives = 370/648 (57%), Gaps = 26/648 (4%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEI 61
           ++I LTFPDG+IK F        VAESIS+SLAKK+V+  ING    ++D + E G  ++
Sbjct: 2   AEISLTFPDGAIKKFDEGIKPIGVAESISKSLAKKSVSGKINGSYIGMNDVITESGDFQL 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSI--WPEVQVAIGPIIEDGFYYDFDKE--QPFSSD 117
           IT  D  +L ++RHS +H++A+A++ I  +  +   +GP IE+GFYYD D       S +
Sbjct: 62  ITTSDSEALDLLRHSASHLLAQALKRIPKFANIHFGVGPFIENGFYYDTDNGAGNQVSIE 121

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +  +IE  M +I+  D P L + ++ ++A EL     + YKVE++  +P  E +T+  QG
Sbjct: 122 DFPEIEAIMHKIVKEDLPILSREITRDEALEL--FADDPYKVELVNDLPVDEKITIAVQG 179

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           +  +L +G  V STG +K F KL  VAGAYWRGDS+ PM+ R+YGTA+    ++   +  
Sbjct: 180 DHIELDKGGLVPSTGWIKHF-KLTSVAGAYWRGDSSNPMMQRVYGTAFWKAADVEAEIAR 238

Query: 238 LEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEIN 295
            EE+++RDHR + R++DLF  +++ GSG+  W   G  I + +  Y+  +++ + Y+ + 
Sbjct: 239 REEAKERDHRVIGRDLDLFFTSQEVGSGLPVWLPNGATIRRQVERYITDKELSNGYQHVY 298

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP + + +L++ SGHWD YR +MF          D     L+PMNCP H+ VFNH  +SY
Sbjct: 299 TPVLSNLNLYKTSGHWDHYREDMFPPMDMG----DGEFLELRPMNCPSHIMVFNHKPRSY 354

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP+R+AE G ++R E SG+L GL RVR  T +D H F   E++  E   I  +++ +Y
Sbjct: 355 RELPMRIAELGMMHRYEKSGALTGLSRVREMTLNDGHTFVEPEKLEEEFKSILTMMMGVY 414

Query: 416 KDFGFEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
           +DF  +    +LS R      K    D +W+ ++  +K  +D +       ++     GE
Sbjct: 415 RDFNIKNYRFRLSYRDPKNTEKYFDDDEMWEKSQKQLKTAMDDLG------LDYFEAEGE 468

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGS 530
            AFYGPK +   K A+G +    TIQ+DF LP RF+  Y+     +   PVM+HR + G+
Sbjct: 469 AAFYGPKLDVQTKTALGNEETLSTIQLDFLLPERFDLKYIGRDGLDNHRPVMLHRGIVGT 528

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNE 589
           +ERF   +IE +KG  P WLSP+Q  +  +   +   YA  +   L+   L    + ++ 
Sbjct: 529 MERFTAYLIEMYKGAFPTWLSPLQVQIIPVNLGAHGNYANAVQQKLQDAGLRANVETKDA 588

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
            + Y IRE    KIP  ++ GD E    ++ +R++G T T  +S  + 
Sbjct: 589 KMGYLIREAQTNKIPYTLVLGDSEVDSNTVTVRKYGDTKTVTMSYDEF 636


>gi|328855773|gb|EGG04898.1| hypothetical protein MELLADRAFT_37217 [Melampsora larici-populina
           98AG31]
          Length = 687

 Score =  579 bits (1493), Expect = e-163,   Method: Composition-based stats.
 Identities = 232/657 (35%), Positives = 353/657 (53%), Gaps = 33/657 (5%)

Query: 3   SDIKLTFPDGSIKN-FPVHATGSDVAESISRSLAKKAVAVAINGK------VCDLSDPVR 55
             I +  P G  K       T  ++A  +S+SLA++ V   +  +      + DL  P+ 
Sbjct: 32  EKILVQLPTGEPKEGISWETTPMEIARGLSKSLAERIVIAEVTLEGVAKPILWDLLRPLE 91

Query: 56  E-GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF----DK 110
           +  S+ ++  E      V  HS AH++ EA +  +    + IGP  +DGF+Y+       
Sbjct: 92  QSCSMRLLDFESEEGKRVFWHSSAHVLGEAAERHY-GCHLCIGPPTDDGFFYEMGMGVSG 150

Query: 111 EQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES-IPAKE 169
           ++   + +   +EK  +  I     F +  +S +   E+       YK  I+ S IP   
Sbjct: 151 DRSVQNADYHPLEKVAESAIKEKQRFERLVISKKSLLEM--FAYNKYKTHIINSKIPDGT 208

Query: 170 NVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQ 229
           + T+YR G   DLC GPH+ +TG +K F  ++K + +Y+ GDS    L RIYG ++  ++
Sbjct: 209 STTVYRCGPMIDLCVGPHIPNTGYIKSFS-ILKNSASYFLGDSANDSLQRIYGISFPDKK 267

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK- 288
            + +Y  FLEE+ KRDHRK+ ++ +LF   E   G  FW   G +I+ TL+ +++ + + 
Sbjct: 268 AMAEYKKFLEEAAKRDHRKIGKDQELFFFHEMSPGSCFWLPHGTRIYNTLVEFLKSEYRK 327

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
             Y+E+ +P + +  LW  SGHW++Y  NMF ++       +  TFALKPMNCPGH  +F
Sbjct: 328 RGYDEVISPNMYNSKLWNTSGHWENYSENMFKLEI------EKETFALKPMNCPGHCLIF 381

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
               +SYRELP+R+A+FG V+RNE SG+L GL RVR F QDDAH FCT +Q+ +E   I 
Sbjct: 382 GSKDRSYRELPLRMADFGVVHRNEASGALSGLTRVRRFCQDDAHHFCTTDQIDSEVAGIF 441

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
           + + ++Y   GF   + KLSTRP+  +G  A+W++AE  +   LD      +      V 
Sbjct: 442 DFLKTVYGMLGFTYKL-KLSTRPDNYIGDLAVWNEAEKRLSSALDKFVGPGE----WDVD 496

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
            G+GAFYGPK +  + DA+ R  QC TIQ+DF LP RF   Y     E+  PVMIHRA+ 
Sbjct: 497 PGDGAFYGPKIDITISDALKRRHQCATIQLDFQLPERFKLQYRTDQGERKRPVMIHRAIM 556

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRN 588
           GS+ERF  I+ E+F G  P WLSP Q +V  + ++   YAQE+A  L    L  + D  +
Sbjct: 557 GSVERFTAILTEHFGGKWPFWLSPRQVLVIPVAATHKAYAQEVAQKLWDAGLYADADMTD 616

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS----TTTQKVSLLDAIPIL 641
            T+  KIR   +     II+ G +E   RS+ +R           Q + L + +   
Sbjct: 617 ATLPKKIRNGEVSSYNFIIVVGSEEVESRSVNVRSADDVGQKGKAQALPLEETLEKF 673


>gi|311246798|ref|XP_003122346.1| PREDICTED: probable threonyl-tRNA synthetase 2, cytoplasmic-like
           [Sus scrofa]
          Length = 801

 Score =  579 bits (1492), Expect = e-163,   Method: Composition-based stats.
 Identities = 228/644 (35%), Positives = 348/644 (54%), Gaps = 23/644 (3%)

Query: 2   PSDIKLTFPDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
            + I +   DG          T   VA  IS+ LA+ AV   +NG++ DL  P+  + ++
Sbjct: 158 SNVITVRVADGKTVEGEVWKTTPYQVAAEISQELAESAVIAKVNGELWDLDRPLEGDSTL 217

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDE 118
           E++T ++  + AV  HS AH++ EA++  +    +      ++GFY D   E +  SS E
Sbjct: 218 ELLTFDNEEAQAVYWHSSAHVLGEAMELHFGGH-LCCSTPTDEGFYCDMFTEDRAVSSTE 276

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L  ++   + II    PF +  +S E   ++F+     +K  IL         T+YR G 
Sbjct: 277 LPALQSTCEAIIKEQQPFERLEVSKEVLLDMFKY--NKFKCRILNEKIKTPTTTVYRCGP 334

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLC+GPHVR TG+     K+ K A  YW  +     L R+YG ++   Q +T +    
Sbjct: 335 LVDLCKGPHVRHTGKT-NAIKIFKSASTYWEDNPEMETLQRVYGISFPDDQMMTDWEKLQ 393

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
           EE++ RDHRK+ +E +LF   +   G  F+  +G  I+  L+ ++R +     + E+ +P
Sbjct: 394 EEAKTRDHRKIGKEQELFFFHDLSPGSCFFLPRGAFIYNALMDFIREEYHQRSFTEVLSP 453

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW+ SGHW  YR NMF      DT      FALKPMNCPGH  +F H  +S+RE
Sbjct: 454 NMYSSKLWEASGHWQHYRENMFTFDVDKDT------FALKPMNCPGHCLMFAHRPRSWRE 507

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           +P+R A+FG ++RNE S +L  L  VR F QDDAH+FCT EQ+  E       + S+Y  
Sbjct: 508 MPIRFADFGVLHRNELSETLSSLTHVRRFQQDDAHIFCTVEQIEEEIKGCLKFLQSVYST 567

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF   +  LSTRPE  +G  A+WD+AE  ++  L       + +       G+GAFYGP
Sbjct: 568 FGFSFQLN-LSTRPEDFLGEVAIWDEAEKQLQNSLVEFGKPWKMK------PGDGAFYGP 620

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIG 536
           K +  +KDAIGR  QC TIQ+DF LP RFN  YV+    +K +PV+IHRA+ GS+ER I 
Sbjct: 621 KIDIKIKDAIGRYHQCATIQLDFQLPIRFNLTYVSKEGDDKKNPVIIHRAILGSVERMIA 680

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FRNETINYKI 595
           I+ EN++G  P WLSP Q IV  +  +  +YA +++N         + D   + T+N KI
Sbjct: 681 ILSENYEGKWPFWLSPRQVIVIPVGPACEKYALQVSNEFLEEGFMADVDLDHSCTLNKKI 740

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
           +   + +   I++ G+KE +  ++ ++   +    ++S+  AI 
Sbjct: 741 QNAQLAQYNFILVVGEKEKANNAVSVQTRDNKIHGEISVTSAID 784


>gi|329767326|ref|ZP_08258851.1| threonyl-tRNA synthetase [Gemella haemolysans M341]
 gi|328836015|gb|EGF85706.1| threonyl-tRNA synthetase [Gemella haemolysans M341]
          Length = 647

 Score =  579 bits (1492), Expect = e-163,   Method: Composition-based stats.
 Identities = 246/650 (37%), Positives = 391/650 (60%), Gaps = 26/650 (4%)

Query: 6   KLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII-- 62
           KL FPDG+++ +    T  ++AESIS SL KK ++  ++    +++ P+ ++G +++I  
Sbjct: 3   KLVFPDGNVREYDNK-TPLEIAESISVSLKKKVISAKLDEDYIEVNKPITKDGHLKLIVA 61

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWP-EVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
             ED  SL V+RH+CAH++A+A++ ++  +V   +GP I+ GFYYDFD E   S ++   
Sbjct: 62  DDEDKDSLYVLRHTCAHVLAQALRRLYGKDVHFGVGPAIDGGFYYDFDAEYKVSEEDFKA 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK++++II+ +     + +S E+A E+F+   + YKVE++  +PA E +T+Y QG++ D
Sbjct: 122 IEKEVKKIISENHAIEGREVSKEEALEIFKE--DPYKVELINDLPADEVITVYTQGDFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG HV +T ++K+F KL+ VAGAYWRG+S+  ML RIYGTA+ T+  + Q+L  L+E+
Sbjct: 180 LCRGGHVSATSKIKEF-KLLSVAGAYWRGNSDNKMLQRIYGTAYFTKDHMEQHLVRLQEA 238

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQV 299
            +RDHRKL +E+ +F  ++    G+  W   G  I +T+  Y+  K  +  Y+ + TP +
Sbjct: 239 RERDHRKLGKELGIFTTSQKVGAGLPLWLPNGATIRRTIERYIVDKEVELGYDHVYTPIM 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             + L+  SGHWD Y+ +MF     D       T  L+PMNCP H+ V+ +   SYRELP
Sbjct: 299 GSKDLYITSGHWDHYQEDMFPPMEMDH-----ETMVLRPMNCPHHMMVYKNERHSYRELP 353

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG++ GL RVRG T +DAH+F   +Q+ +E      LI   YKD G
Sbjct: 354 IRIAELGMMHRYEASGAVSGLQRVRGMTLNDAHIFVRPDQLKDEFKLTVGLIEEAYKDLG 413

Query: 420 FEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
            +    +LS R      K    DA+W++A+ ++K   D +       ++     GE AFY
Sbjct: 414 IKNFSYRLSYRDPENTEKYFDDDAMWNNAQQMLKETADELG------LDYVEAEGEAAFY 467

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  ++ AIG+     TIQ+DF LP RF   Y+    +   PV+IHR +  ++ER +
Sbjct: 468 GPKLDVQVETAIGKQETLSTIQLDFLLPERFELEYIGEDGKAHRPVVIHRGIVSTMERMV 527

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             ++E +KG+LP WLSP Q  +  + +    +Y++EI   LK   + +  D R+E + YK
Sbjct: 528 AFLLEEYKGDLPTWLSPNQVRIIPVNNDYHYDYSKEIMQELKKAGVKVAIDDRDEKLGYK 587

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IRE + KKIP  ++ GDKE   R++ +R FGS   ++ S  +    + KE
Sbjct: 588 IREAASKKIPYTLVIGDKEVENRNVNVRTFGSHDQKEESFAEFKENILKE 637


>gi|289620774|emb|CBI52508.1| unnamed protein product [Sordaria macrospora]
          Length = 792

 Score =  579 bits (1492), Expect = e-163,   Method: Composition-based stats.
 Identities = 238/702 (33%), Positives = 364/702 (51%), Gaps = 70/702 (9%)

Query: 3   SDIKLTFPDGSIKNF-PVHATGSDVAESISRSLAKKAVAVAINGK-VCDLSDPVRE-GSI 59
            DI +T PDGS K       T +++A+SIS SL K+ V   I+G+ + DL  P+ +   +
Sbjct: 77  DDILITMPDGSTKAGKAYETTPAEIAKSISNSLFKRTVVARIDGETLWDLERPLEKSCKL 136

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD--KEQPFSSD 117
           E++   D +   V  HS AH++ EA +  +    + IGP +++GFYY+          S 
Sbjct: 137 ELLDFNDDQGKFVFWHSSAHVLGEACERRF-GCSLCIGPPVDNGFYYEMALPGGAAVQSS 195

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES-IPAKENVTLYRQ 176
           + A +E  + +I+    PF +  +S E   ++F      YK  I++  IP     T+YR 
Sbjct: 196 DWAPLENIVTKIVKEKQPFQRLEMSKEDLLKMFAY--NPYKQHIIKDKIPDGTRTTVYRN 253

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           G   DLCRGPHV  T +++ F  +MK + +Y+ GD+N   L RIYG ++  ++++  +  
Sbjct: 254 GPLIDLCRGPHVPDTSRIEAF-AIMKNSSSYFLGDANNDSLQRIYGVSFPDKKQMAAHKK 312

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEIN 295
           FLEE+ KRDHR + ++ +LF+  E   G   W   G +I   ++ Y++ +     Y+E+ 
Sbjct: 313 FLEEAAKRDHRLIGKQQELFYFEECSPGSAMWLPHGMRINNAIMEYIKEEYWKRGYDEVM 372

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP + +  LW+QSGH   Y+ +MF +        D   F LKPMNCP H  +F H  +S+
Sbjct: 373 TPNMFNTSLWEQSGHLAHYKDDMFILDV------DKEQFGLKPMNCPAHAMMFRHRDRSH 426

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           +ELP+RLA+FG ++RNE SG+L GL RVR F QDDAH+FC ++Q+  E   + + + S Y
Sbjct: 427 KELPLRLADFGVLHRNEASGALSGLTRVRRFQQDDAHIFCREDQIKAEVADLFDFMKSFY 486

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
              G    + KLSTRPEK +G    WD AE  +K  L+    S+       +  G+GAFY
Sbjct: 487 GMLGLTFKL-KLSTRPEKYMGEIETWDRAEARLKEALNEFTASTGG--TWELNEGDGAFY 543

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC----------------- 518
           GPK +  + D + R WQC TIQ+DF  P  F+  Y+ + ++                   
Sbjct: 544 GPKIDIAVLDCLNRPWQCATIQLDFQQPINFSLEYMTAETQAKQDESKLAPKAPEPEAPK 603

Query: 519 ---------------------------HPVMIHRAVFGSIERFIGIMIENFKGNLPLWLS 551
                                       PVMIHRA+ GSIERF  I+ E+F G  P W+S
Sbjct: 604 EEEAPKEGEDKKKKPLLVKKPLAPGCARPVMIHRAMAGSIERFTAILAEHFAGKWPFWMS 663

Query: 552 PIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
           P Q +V  +    ++YA+E+A  LK   + ++ D    T+  KIR   + +   I + GD
Sbjct: 664 PRQVMVIPVGMGFLDYAKEVALTLKKEKIHVDVDSSGNTLQKKIRSAQLAQYNFIFVVGD 723

Query: 612 KEASERSIGIRRFGSTTTQKV----SLLDAIPILTKESLPPD 649
            E + R + IR    T+TQ       L +A+  L   +L  D
Sbjct: 724 DEKTNRKVNIRYRDDTSTQARDVPYPLSEAVDKLR--ALKAD 763


>gi|116617774|ref|YP_818145.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Leuconostoc
           mesenteroides subsp. mesenteroides ATCC 8293]
 gi|122272025|sp|Q03YF0|SYT_LEUMM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|116096621|gb|ABJ61772.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Leuconostoc
           mesenteroides subsp. mesenteroides ATCC 8293]
          Length = 652

 Score =  579 bits (1491), Expect = e-163,   Method: Composition-based stats.
 Identities = 234/648 (36%), Positives = 371/648 (57%), Gaps = 26/648 (4%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEI 61
           ++I LTFPDG+IK F        VAESIS+SLAKK+V+  ING    ++D + E G  ++
Sbjct: 2   AEISLTFPDGAIKKFDEGIKPIGVAESISKSLAKKSVSGKINGSYIGMNDVITESGDFQL 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSI--WPEVQVAIGPIIEDGFYYDFDKE--QPFSSD 117
           IT  D  +L ++RHS +H++A+A++ I  +  +   +GP IE+GFYYD D       S +
Sbjct: 62  ITTSDSEALDLLRHSASHLLAQALKRIPKFANIHFGVGPFIENGFYYDTDNGAGNQVSIE 121

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +  +IE  M +I+  D P L + ++ ++A E+     + YKVE++  +P  E +T+  QG
Sbjct: 122 DFPEIEAIMHKIVKEDLPILSREITRDEALEI--FADDPYKVELVNDLPVDEKITIAVQG 179

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           +  +L +G  V STG +K F KL  VAGAYWRGDS+ PM+ R+YGTA+    ++   +  
Sbjct: 180 DHIELDKGGLVPSTGWIKHF-KLTSVAGAYWRGDSSNPMMQRVYGTAFWKAADVEAEIAR 238

Query: 238 LEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEIN 295
            EE+++RDHR + R++DLF  +++ GSG+  W   G  I + +  Y+  +++ + Y+ + 
Sbjct: 239 REEAKERDHRVIGRDLDLFFTSQEVGSGLPVWLPNGATIRRQVERYITDKELSNGYQHVY 298

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP + + +L++ SGHWD YR +MF          D     L+PMNCP H+ VFNH  +SY
Sbjct: 299 TPVLSNLNLYKTSGHWDHYREDMFPPMDMG----DGEFLELRPMNCPSHIMVFNHKPRSY 354

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP+R+AE G ++R E SG+L GL RVR  T +D H F   E++  E   I  +++ +Y
Sbjct: 355 RELPMRIAELGMMHRYEKSGALTGLSRVREMTLNDGHTFVEPEKLEEEFKSILTMMMGVY 414

Query: 416 KDFGFEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
           +DF  +    +LS R      K    D +W+ ++  +K  +D +       ++     GE
Sbjct: 415 RDFNIKDYRFRLSYRDPKNTEKYFDDDEMWEKSQKQLKTAMDDLG------LDYFEAEGE 468

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGS 530
            AFYGPK +   K A+G +    TIQ+DF LP RF+  Y+     +   PVM+HR + G+
Sbjct: 469 AAFYGPKLDVQTKTALGNEETLSTIQLDFLLPERFDLKYIGRDGLDNHRPVMLHRGIVGT 528

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNE 589
           +ERF   +IE +KG  P WLSP+Q  +  +   +   YA  +   L+   L    + ++ 
Sbjct: 529 MERFTAYLIEMYKGAFPTWLSPLQVQIIPVNLGAHGNYANAVQQKLQDAGLRANVETKDA 588

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
            + Y IRE    KIP  ++ GD E +  ++ +R++G T T  +S  + 
Sbjct: 589 KMGYLIREAQTNKIPYTLVLGDSEVNSNTVTVRKYGDTKTVTMSYDEF 636


>gi|116514446|ref|YP_813352.1| threonyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
 gi|116093761|gb|ABJ58914.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Lactobacillus
           delbrueckii subsp. bulgaricus ATCC BAA-365]
 gi|325126146|gb|ADY85476.1| Threonyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus 2038]
          Length = 643

 Score =  579 bits (1491), Expect = e-163,   Method: Composition-based stats.
 Identities = 219/646 (33%), Positives = 358/646 (55%), Gaps = 23/646 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           L  PDGS K F    + +D+A SIS SLAK AVA  ++G++  L   +  +  + I+T +
Sbjct: 5   LILPDGSKKEFDAAVSVADLASSISTSLAKNAVAGKVDGEIKPLDFQLDTDHEVAILTNK 64

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L+V+R + A ++   V+  +PE+++    + EDGF+ + DKE      EL  +EK 
Sbjct: 65  DAEGLSVLRATVAFVLEALVKDKYPEIKLGQAEVSEDGFFIETDKEDQIKVTELPDLEKA 124

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           +Q+ I          ++  +  E    K + YK E+L      + V  Y+ G++ D    
Sbjct: 125 LQKAIKNGEAIEHVQVAKSELAE--AFKDDPYKSELLAK--EGDVVDAYKLGDFVDFGFS 180

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
             + +TG++KKF KL+ VAGAYW+G S+ PML RI+GTA+  + +L   L    E ++RD
Sbjct: 181 ALLPNTGKIKKF-KLLSVAGAYWKGKSSNPMLQRIFGTAFFKEADLEADLKRRAEIKERD 239

Query: 246 HRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQH 303
           HR + R++DLF +      G+ +W  KG  I + +  Y+  +++   Y+ + TP +++  
Sbjct: 240 HRTIGRDLDLFFVDPKAGAGLPYWMPKGATIRRIIERYIVDKEVAAGYQHVYTPVLMNLD 299

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
            ++ SGHW  YR +MF          +     L+PMNCP H+ ++ H ++SYRELP+R+A
Sbjct: 300 AYKTSGHWAHYREDMFPPMDMG----EGEMLELRPMNCPSHIQIYKHHIRSYRELPIRIA 355

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           E G ++R E SG+L GL RVR  T +D H F   +Q+  E  +   +I+ +Y DF     
Sbjct: 356 ELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQVQEEFARTLQIIMDVYHDFDINDY 415

Query: 424 MVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
             +LS R  K       +D +W+ +++++K  +D +       ++     GE AFYGPK 
Sbjct: 416 YFRLSYRDPKNTDKYFANDEMWERSQSMLKAAMDDMG------LDYVEAEGEAAFYGPKL 469

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +   K A+G D    TIQ+DF LP RF   Y+ +  E+  PVMIHR + G++ERFI  + 
Sbjct: 470 DIQTKTALGNDETMSTIQLDFMLPERFELSYIGADGEEHRPVMIHRGIVGTMERFIAYLT 529

Query: 540 ENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           E +KG  P WL+P+QA +  +   +  +YA+++ + L +     E DFRNE + YKIRE 
Sbjct: 530 EIYKGAFPTWLAPVQAEIIPVNLDAHSDYAKKVRDELVAKGFRAEIDFRNEKLGYKIRES 589

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
             +K+P  ++ GD E +  ++ +R +G+      SL + +  L+K+
Sbjct: 590 QTQKVPYTLVLGDDEMNAGTVNVRPYGTEEQNSESLAEFMDKLSKD 635


>gi|294811598|ref|ZP_06770241.1| Threonyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|294324197|gb|EFG05840.1| Threonyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
          Length = 719

 Score =  579 bits (1491), Expect = e-163,   Method: Composition-based stats.
 Identities = 261/664 (39%), Positives = 385/664 (57%), Gaps = 38/664 (5%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEI 61
           SD+++     S +   V  TG+  A+  +    +  VA  + G++ DL+  VR+G  +E 
Sbjct: 63  SDVRVIIQRDSEREERVVTTGTTAADLFAGE--RSVVAARVAGELKDLAYTVRDGEQVEP 120

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +       LA++RHS AH+MA+AVQ ++PE ++ IGP ++DGFYYDFD E+PF+ ++L  
Sbjct: 121 VEISSEDGLAILRHSTAHVMAQAVQELFPEAKLGIGPPVKDGFYYDFDVEKPFTPEDLKA 180

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIP------------AKE 169
           IEKKMQEI  R   F ++ +  ++ARE  E   E YK+E++                   
Sbjct: 181 IEKKMQEIQKRGQRFSRRVVGDDEARE--ELADEPYKLELIGLKGSASSEDGAAVEVGAG 238

Query: 170 NVTLYRQGE-------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYG 222
            +T+Y   +       W DLCRGPH+ ST  +  F KLM+ A AYWRG    PML RIYG
Sbjct: 239 ELTIYDNLDAKTGELCWKDLCRGPHLPSTRNIPAF-KLMRNAAAYWRGSEKNPMLQRIYG 297

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLIS 281
           TAW T+ EL QYL FL E+EKRDHR+L  E+DLF + ++ GSG+  +H +G  + + +  
Sbjct: 298 TAWPTKDELKQYLEFLAEAEKRDHRRLGSELDLFSVPDEIGSGLAVFHPRGGIVRRVMED 357

Query: 282 YMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
           Y R R  ++ YE + TP      L+++SGH D Y   M+     D        + LKPMN
Sbjct: 358 YSRKRHEEEGYEFVYTPHATKGTLFEKSGHLDWYAEGMYPPMQLDG----GTDYYLKPMN 413

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
           CP H  +F+   +SYRELP+RL EFG+VYR+E SG +HGL R RGFTQDDAH++CT+EQM
Sbjct: 414 CPMHNLIFDARGRSYRELPLRLFEFGTVYRHEKSGVVHGLTRARGFTQDDAHIYCTREQM 473

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDTIKNSS 459
             E  +    ++++ +D+G     ++LST+  +  VGSD  W++A  +++ V +      
Sbjct: 474 AEELDRTLTFVLNLLRDYGLTDFYLELSTKDPEKYVGSDETWEEATEVLRRVAE------ 527

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
           +  +      G  AFYGPK     +DAIGR WQ  TIQ+DFNLP RFN  Y      +  
Sbjct: 528 KQGLPLTPDPGGAAFYGPKISVQARDAIGRTWQMSTIQLDFNLPERFNLEYTAPDGSRQR 587

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH 579
           PVMIHRA+FGSIERF  +++E++ G +P WL+P+QA+   I  + +EY Q  A   K   
Sbjct: 588 PVMIHRALFGSIERFFAVLLEHYAGAMPPWLAPVQAVGIPIGDAHIEYLQSFAAEAKKRG 647

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
           L ++ D  ++ +  KIR H   K+P +II GD++ +  ++  R    +    +    A+ 
Sbjct: 648 LRVDVDASSDRMQKKIRNHQKLKVPFMIIVGDEDMNAGTVSFRYRDGSQENGIPRDAALA 707

Query: 640 ILTK 643
            L +
Sbjct: 708 KLEQ 711


>gi|58697298|ref|ZP_00372664.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           simulans]
 gi|58536340|gb|EAL59818.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           simulans]
          Length = 580

 Score =  579 bits (1491), Expect = e-163,   Method: Composition-based stats.
 Identities = 293/595 (49%), Positives = 409/595 (68%), Gaps = 18/595 (3%)

Query: 4   DIKLTF-PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
            I++ F  +  +K +    TG D+ +     + K+A+A  +NG++ DLS  +  +  IE+
Sbjct: 1   MIRIIFSAEQKVKEYSGKVTGFDILQ---PDVLKEAIAFKVNGELHDLSREIEADAEIEV 57

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           I   D   L +IRH  AHIMA+AV+ ++P  Q+ IGP I+DGFYYDF   + F++D+L  
Sbjct: 58  IQLSDEAGLDIIRHDAAHIMAQAVKELFPNTQITIGPTIQDGFYYDFATGRTFTTDDLTA 117

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEKKM+EI+  +  F+++  + ++A + F    E YKV+I+ SIP  EN+T+YRQG++ D
Sbjct: 118 IEKKMKEIVKSNHRFVREVWTRKQAIDFFSDIGEKYKVDIISSIPEGENLTVYRQGDFID 177

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH  STG+VK F KLMKVAGAYWRGD+  PML RIYGTAW  + EL  YL  L+E+
Sbjct: 178 LCRGPHSPSTGRVKAF-KLMKVAGAYWRGDAKGPMLQRIYGTAWRNKDELNAYLECLKEA 236

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVL 300
           EKRDHRK+A++MDLFHI E+  G +FWH +G+ ++  L SY+R+K+  + Y E+ TP ++
Sbjct: 237 EKRDHRKIAKDMDLFHIQEEAVGQVFWHEQGYILYNVLESYIRKKLINNGYFEVKTPILV 296

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            + LW++SGHWD +R NMF V        + +  A+KPMNCP HV +FN   +SYR+LP+
Sbjct: 297 SKELWEKSGHWDKFRENMFIV-----DESESKKLAIKPMNCPCHVQIFNSHTRSYRDLPI 351

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AEFG+ +RNE SGSLHGLMRVRGFTQDDAH+FC +EQ+ +E +K  +L+  +Y + GF
Sbjct: 352 RMAEFGTCHRNESSGSLHGLMRVRGFTQDDAHIFCMEEQVNSETIKFCDLLKEVYSELGF 411

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
            +I VK S RP+ R G D +WD AE  +   +          ++  +  GEGAFYGPK E
Sbjct: 412 NEISVKFSDRPDVRAGDDEVWDRAEKALLEAVKEAG------LSYELSPGEGAFYGPKLE 465

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           ++LKDAIGR WQCGT+QVDF LP R  AFY+ +   K HPVM+HRA+ G+ ERFIGI+IE
Sbjct: 466 FVLKDAIGRSWQCGTLQVDFILPERLGAFYIGADGHKHHPVMLHRAILGTFERFIGILIE 525

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
           N+ G  P+WL+P Q  + TIT+ A  YA +I+N+LK   + ++TD  NE I+YKI
Sbjct: 526 NYAGKFPVWLAPTQLAILTITNEADGYATKISNVLKEQGVRVKTDLTNEKISYKI 580


>gi|219113513|ref|XP_002186340.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|209583190|gb|ACI65810.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 766

 Score =  578 bits (1490), Expect = e-163,   Method: Composition-based stats.
 Identities = 213/660 (32%), Positives = 351/660 (53%), Gaps = 33/660 (5%)

Query: 2   PSDIKLTFPDGSIKNFP--------VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDP 53
           P+ I++  PDG +               T  DVA  I++ LA  A     N  + D++ P
Sbjct: 116 PTPIRVVMPDGKVLEQDQEGQNFRAWQTTPWDVARVIAQGLADAATVARENQLLWDMTRP 175

Query: 54  V--REGSIEIITP-EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FD 109
           +      +E++   +D  +  V  HS AH+M EA++ ++   ++ IGP +  GFYYD + 
Sbjct: 176 LVGNVAKLELLKFEDDQDAKTVFWHSSAHMMGEALEHLY-GCKLTIGPPLAGGFYYDSYM 234

Query: 110 KEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE-SIPAK 168
            +  F  ++ + +E ++ +II +   F +  ++ E+  EL       +KV IL   +P  
Sbjct: 235 GKDAFREEDYSPVEGEVGKIIKQKQKFERLVITKEEGLEL--FADNPFKVNILTTKVPDG 292

Query: 169 ENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQ 228
              T+Y+ G+  DLCRGPH+  TG+VK F          W GD+N   L R+YG ++  +
Sbjct: 293 SRTTVYKCGDLIDLCRGPHLSHTGKVKAFAATRHS-ATNWLGDTNNDTLQRMYGISFPDK 351

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK 288
           + L  +    E++++RDHR++A + DL    +  +G  FW   G +I+  LI +++    
Sbjct: 352 KMLKVWKENQEKAKERDHRRIAAKQDLIMFHDLSAGSAFWLPHGARIYNKLIDFIKSHYW 411

Query: 289 -DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
              Y+EI TP + +  LW +SGH   Y+  MF          + + +A+KPMNCPGH  +
Sbjct: 412 NRGYDEIITPNIYNLDLWHKSGHALHYKDAMFCFDV------EGQEWAMKPMNCPGHCLM 465

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
           F + ++SYR+LP+R A+FG ++RNE SG+L GL RVR F QDDAH++C ++Q+  E +  
Sbjct: 466 FANSIRSYRDLPLRFADFGVLHRNELSGALTGLTRVRRFQQDDAHIYCREDQIEKEVVDA 525

Query: 408 HNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGV 467
            N +  +Y  FG    + +LSTRP+K +G  ALW+ AE  +   +D        R+N   
Sbjct: 526 LNFMKDVYDTFGMTYKL-ELSTRPQKALGDVALWERAEEALANAMDMFAGKGGWRVN--- 581

Query: 468 LLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC----HPVMI 523
             G+GAFYGPK +  + DA+ R  QC T+Q+DF LP RF+  Y  +  E+      PVMI
Sbjct: 582 -PGDGAFYGPKIDIKVMDAMDRVHQCATVQLDFQLPIRFDLQYTTASKEEGQQFARPVMI 640

Query: 524 HRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIE 583
           HRA+ GS+ER   ++ E++ G  P WLSP Q ++  + +   +Y+++I   L +    ++
Sbjct: 641 HRAMLGSVERMFAVLCEHYGGKWPFWLSPRQVMLVPVHAEFFDYSEDIRAKLHAEGFYVD 700

Query: 584 TDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            D    T   K+R   + +     + G  E +  S+ IR   +    +  + + I +L +
Sbjct: 701 VDTSKNTFQKKVRNAQVAQYNFQFVVGKAEVANGSVNIRNRENQVEGEKKIDEMIAMLKQ 760


>gi|229815156|ref|ZP_04445493.1| hypothetical protein COLINT_02202 [Collinsella intestinalis DSM
           13280]
 gi|229809386|gb|EEP45151.1| hypothetical protein COLINT_02202 [Collinsella intestinalis DSM
           13280]
          Length = 595

 Score =  578 bits (1490), Expect = e-162,   Method: Composition-based stats.
 Identities = 253/604 (41%), Positives = 378/604 (62%), Gaps = 20/604 (3%)

Query: 45  GKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGF 104
           GKV D+     +GS+  +  +   +  VIRHS AHIMA+A++ ++PE   A GP  ++GF
Sbjct: 5   GKVLDMKALYNDGSVAEVEAD--EAQHVIRHSAAHIMAQAIKHLYPEADFAYGPATDNGF 62

Query: 105 YYDFD-KEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE 163
           YYD D  ++  S D+L  IE +M++I+  +  F    L  E+A  L E + E YKVE + 
Sbjct: 63  YYDVDLGDKKISEDDLPTIEAEMKKIVKENLKFQVFELPREEAIALMEERGEKYKVEHIG 122

Query: 164 SIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
            +     +T Y+QG++ D+C GPH+  T  +K F KL  V+GAYW+ D+N  ML+RI GT
Sbjct: 123 DLADDARITFYQQGDYIDMCVGPHLTYTKALKAF-KLTGVSGAYWKNDANNKMLTRINGT 181

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYM 283
           A+ T+ EL  +L  LEE++KRDHR++ REMDLF + ++  G  F+   G  +  TL+ Y 
Sbjct: 182 AFATKDELEAHLTLLEEAKKRDHRRIGREMDLFMMRDEAPGFPFFLPNGMVLKNTLLDYW 241

Query: 284 RR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
           R    K  Y EI+TPQ++++ LW  SGHWD Y+ NM++         D   + +KPMNCP
Sbjct: 242 REIHHKAGYVEISTPQIMNKSLWLTSGHWDHYKDNMYSTMI------DDEEYCIKPMNCP 295

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN 402
           G V V++    SYRELP+R  E G V+R+E  G+LHGL RVR F QDDAH+F T EQ+ +
Sbjct: 296 GGVLVYSSKPHSYRELPIRAGEIGLVHRHELRGALHGLFRVRCFNQDDAHLFVTPEQLTD 355

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
           E + +  LI S+Y+ FGF+   V+LSTRPE  +GSD  W  AE  +K  LD +       
Sbjct: 356 EIVGVVRLIDSVYQKFGFKYH-VELSTRPEDSMGSDEDWAAAEEGLKVALDKLG------ 408

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
           ++  V  G+GAFYGPK ++ L+D++GR WQCGT+Q+DF +P  F+  YV++  EK  P+M
Sbjct: 409 MDYVVNEGDGAFYGPKIDFHLEDSLGRTWQCGTVQLDFQMPQNFDLTYVDADGEKKRPIM 468

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSI 582
           +HR  FGSIERFIGI+IE++ G  P+WL+P+Q  V  ++  + +YA ++   L++  + +
Sbjct: 469 LHRVCFGSIERFIGILIEHYAGKFPVWLAPMQVKVLPVSEKSRDYAHQVTEQLEAAGIRV 528

Query: 583 ETDFRNETINYKIREHS-IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
             D R+E I YKIRE   + ++P ++I G+KE    +I +R   S  T  +++ + I  +
Sbjct: 529 VCDDRDEKIGYKIREARGVDRVPYMLILGEKEVEAGNISVRDR-SNETVPMAVDEFIAKV 587

Query: 642 TKES 645
            +E+
Sbjct: 588 VEET 591


>gi|199599516|ref|ZP_03212905.1| Threonyl-tRNA synthetase [Lactobacillus rhamnosus HN001]
 gi|258508749|ref|YP_003171500.1| threonyl-tRNA synthetase [Lactobacillus rhamnosus GG]
 gi|199589585|gb|EDY97702.1| Threonyl-tRNA synthetase [Lactobacillus rhamnosus HN001]
 gi|257148676|emb|CAR87649.1| Threonyl-tRNA synthetase [Lactobacillus rhamnosus GG]
 gi|259650055|dbj|BAI42217.1| threonyl-tRNA synthetase [Lactobacillus rhamnosus GG]
          Length = 657

 Score =  578 bits (1490), Expect = e-162,   Method: Composition-based stats.
 Identities = 238/647 (36%), Positives = 373/647 (57%), Gaps = 24/647 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +TFPDGS+K FP   T   + E IS SLAKKAVA  ++ ++   ++P+   G ++I+T +
Sbjct: 5   ITFPDGSVKQFPDGTTVKAITEGISNSLAKKAVAGKLDDELIAYNEPIAHSGKLQIMTKD 64

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQIEK 124
           D   L V+R + A ++A A+++++P++    G  IEDGFYYD D+ +   S D+L  ++K
Sbjct: 65  DAEGLTVLRQTAAFVLAAALKALYPDIHFGKGQAIEDGFYYDTDRADGQVSVDDLPTVQK 124

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
           KM+EII  ++      LS  +A      K + +K +++E   A + +  Y+ G++ D   
Sbjct: 125 KMEEIIKANAALEPVVLSRAEA--FDRFKDDPFKKQLVE--AAGDPIKGYKLGDFVDFEE 180

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
              + S   +K F KL+ VAGAYW+G S+ PML RIYGTA+ +++ L       +E+ +R
Sbjct: 181 KVLLPSLKDLKHF-KLLSVAGAYWQGKSSNPMLQRIYGTAYWSEKGLEDDAKRRKEAAER 239

Query: 245 DHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQ 302
           DHR + R++DLF +      G+ +W   G  I + +  Y+  ++I D YE + TP + + 
Sbjct: 240 DHRVIGRDLDLFFVDPKVGAGLPYWMPNGATIRRVIERYIIDKEIADGYEHVYTPVLANL 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            L++ SGHWD YR +MF          D     L+PMNCP H+ ++NH ++SYRELP+R+
Sbjct: 300 DLYKTSGHWDHYREDMFPPMDMG----DGEMLELRPMNCPSHIQIYNHHIRSYRELPLRI 355

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AE G ++R E SG+L GL RVR  T +D H F   +Q+  E  KI  LI+ +Y+DF    
Sbjct: 356 AELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQVQEEFKKILRLIMDVYEDFNITD 415

Query: 423 IMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
              +LS R  K        D +W  +++++KG +D +       ++     GE AFYGPK
Sbjct: 416 YSFRLSYRDPKNTEKYFDDDEMWTRSQSMLKGAMDDLH------LDYYEAEGEAAFYGPK 469

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +   K A+G D    TIQ+DF LP RFN  YV    E+  PVMIHR + G++ERFI  +
Sbjct: 470 LDIQTKTALGNDETMSTIQLDFMLPERFNLTYVGKDGEEHRPVMIHRGIVGTMERFIAYL 529

Query: 539 IENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
            E +KG  P WL+P QA++  + +   ++Y   I   +++  L ++ D RNE + YKIRE
Sbjct: 530 TEIYKGAFPTWLAPTQAVLIPVNNDLHLDYVNRIKRQMQAAGLRVKVDDRNEKMGYKIRE 589

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
              KKIP  ++ GDKE ++ ++ +RR+G   T++ +    I  +  E
Sbjct: 590 AQTKKIPYTVVVGDKELNDAAVSVRRYGDEHTEEEAGNMFIDAMVAE 636


>gi|229552552|ref|ZP_04441277.1| threonine--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
 gi|258539925|ref|YP_003174424.1| threonyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705]
 gi|229314104|gb|EEN80077.1| threonine--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
 gi|257151601|emb|CAR90573.1| Threonyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705]
          Length = 657

 Score =  578 bits (1489), Expect = e-162,   Method: Composition-based stats.
 Identities = 238/647 (36%), Positives = 373/647 (57%), Gaps = 24/647 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +TFPDGS+K FP   T   + E IS SLAKKAVA  ++ ++   ++P+   G ++I+T +
Sbjct: 5   ITFPDGSVKQFPDGTTVKAITEGISNSLAKKAVAGKLDDELIAYNEPIAHSGKLQIMTKD 64

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQIEK 124
           D   L V+R + A ++A A+++++P++    G  IEDGFYYD D+ +   S D+L  ++K
Sbjct: 65  DAEGLTVLRQTAAFVLAAALKALYPDIHFGKGQAIEDGFYYDTDRADGQVSVDDLPTVQK 124

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
           KM+EII  ++      LS  +A      K + +K +++E   A + +  Y+ G++ D   
Sbjct: 125 KMEEIIKANAALEPVELSRAEA--FDRFKDDPFKKQLVE--AAGDPIKGYKLGDFVDFEE 180

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
              + S   +K F KL+ VAGAYW+G S+ PML RIYGTA+ +++ L       +E+ +R
Sbjct: 181 KVLLPSLKDLKHF-KLLSVAGAYWQGKSSNPMLQRIYGTAYWSEKGLEDDAKRRKEAAER 239

Query: 245 DHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQ 302
           DHR + R++DLF +      G+ +W   G  I + +  Y+  ++I D YE + TP + + 
Sbjct: 240 DHRVIGRDLDLFFVDPKVGAGLPYWMPNGATIRRVIERYIIDKEIADGYEHVYTPVLANL 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            L++ SGHWD YR +MF          D     L+PMNCP H+ ++NH ++SYRELP+R+
Sbjct: 300 DLYKTSGHWDHYREDMFPPMDMG----DGEMLELRPMNCPSHIQIYNHHIRSYRELPLRI 355

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AE G ++R E SG+L GL RVR  T +D H F   +Q+  E  KI  LI+ +Y+DF    
Sbjct: 356 AELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQVQEEFKKILRLIMDVYEDFNITD 415

Query: 423 IMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
              +LS R  K        D +W  +++++KG +D +       ++     GE AFYGPK
Sbjct: 416 YSFRLSYRDPKNTEKYFDDDEMWTRSQSMLKGAMDDLH------LDYYEAEGEAAFYGPK 469

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +   K A+G D    TIQ+DF LP RFN  YV    E+  PVMIHR + G++ERFI  +
Sbjct: 470 LDIQTKTALGNDETMSTIQLDFMLPERFNLTYVGKDGEEHRPVMIHRGIVGTMERFIAYL 529

Query: 539 IENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
            E +KG  P WL+P QA++  + +   ++Y   I   +++  L ++ D RNE + YKIRE
Sbjct: 530 TEIYKGAFPTWLAPTQAVLIPVNNDLHLDYVNRIKRQMQAAGLRVKVDDRNEKMGYKIRE 589

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
              KKIP  ++ GDKE ++ ++ +RR+G   T++ +    I  +  E
Sbjct: 590 AQTKKIPYTVVVGDKELNDAAVSVRRYGDEHTEEEAGNMFIDAMVAE 636


>gi|104774352|ref|YP_619332.1| threonyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|103423433|emb|CAI98306.1| Threonyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
          Length = 643

 Score =  578 bits (1489), Expect = e-162,   Method: Composition-based stats.
 Identities = 219/646 (33%), Positives = 358/646 (55%), Gaps = 23/646 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           L  PDGS K F    + +D+A SIS SLAK AVA  ++G++  L   +  +  + I+T +
Sbjct: 5   LILPDGSKKEFDAAVSVADLASSISTSLAKNAVAGKVDGEIKPLDFQLDTDHEVAILTNK 64

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L+V+R + A ++   V+  +PE+++    + EDGF+ + DKE      EL  +EK 
Sbjct: 65  DAEGLSVLRATVAFVLEALVKDKYPEIKLGQAEVSEDGFFIETDKEDQIKVTELPDLEKA 124

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           +Q+ I          ++  +  E    K + YK E+L      + V  Y+ G++ D    
Sbjct: 125 LQKAIKNGEAIEHVQVAKSELAE--AFKDDPYKSELLAK--EGDVVDAYKLGDFVDFGFS 180

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
             + +TG++KKF KL+ VAGAYW+G S+ PML RI+GTA+  + +L   L    E ++RD
Sbjct: 181 ALLPNTGKIKKF-KLLSVAGAYWKGKSSNPMLQRIFGTAFFKEADLEADLKRRAEIKERD 239

Query: 246 HRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQH 303
           HR + R++DLF +      G+ +W  KG  I + +  Y+  +++   Y+ + TP +++  
Sbjct: 240 HRTIGRDLDLFFVDPKAGAGLPYWMPKGATIRRIIERYIVDKEVAAGYQHVYTPVLMNLD 299

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
            ++ SGHW  YR +MF          +     L+PMNCP H+ ++ H ++SYRELP+R+A
Sbjct: 300 AYKTSGHWAHYREDMFPPMDMG----EGEMLELRPMNCPSHIQIYKHHIRSYRELPIRIA 355

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           E G ++R E SG+L GL RVR  T +D H F   +Q+  E  +   +I+ +Y DF     
Sbjct: 356 ELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQVQEEFARTLQIIMDVYHDFDINDY 415

Query: 424 MVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
             +LS R  K       +D +W+ +++++K  +D +       ++     GE AFYGPK 
Sbjct: 416 YFRLSYRDPKNTDKYFANDEMWERSQSMLKAAMDDMG------LDYVEAEGEAAFYGPKL 469

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +   K A+G D    TIQ+DF LP RF   Y+ +  E+  PVMIHR + G++ERFI  + 
Sbjct: 470 DIQTKTALGNDETMSTIQLDFMLPERFELSYIGADGEEHRPVMIHRGIVGTMERFIAYLT 529

Query: 540 ENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           E +KG  P WL+P+QA +  +   +  +YA+++ + L +     E DFRNE + YKIRE 
Sbjct: 530 EIYKGAFPTWLAPVQAEIIPVNLDAHSDYAKKVRDELVAKGFRAEIDFRNEKLGYKIRES 589

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
             +K+P  ++ GD E +  ++ +R +G+      SL + +  L+K+
Sbjct: 590 QTQKVPYTLVLGDDEMNAGTVNVRPYGTEEQNSESLAEFMGKLSKD 635


>gi|325685802|gb|EGD27875.1| threonine--tRNA ligase [Lactobacillus delbrueckii subsp. lactis DSM
           20072]
          Length = 643

 Score =  578 bits (1489), Expect = e-162,   Method: Composition-based stats.
 Identities = 220/646 (34%), Positives = 360/646 (55%), Gaps = 23/646 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           LT PDGS K F V  + +D+A SIS SLAK AVA  ++G++  L   +  +  + I+T +
Sbjct: 5   LTLPDGSKKEFDVAVSVADLASSISTSLAKNAVAGKVDGEIKPLDFQLDADYEVAILTNK 64

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L+V+R + A ++   V+  +PE+++    + EDGF+ + DKE      EL  +EK 
Sbjct: 65  DAEGLSVLRATVAFVLEALVKDKYPEIKLGQAEVSEDGFFIETDKEDQIKVTELPDLEKA 124

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           +Q+ I          ++  +  E    K + YK E+L      + V  Y+ G++ D    
Sbjct: 125 LQKAIKNGEAIEHVQVAKSELAE--AFKDDPYKSELLAK--EGDVVDAYKLGDFVDFGFS 180

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
             + +TG++KKF KL+ VAGAYW+G S+ P+L RI+GTA+  + +L   L    E ++RD
Sbjct: 181 ALLPNTGKIKKF-KLLSVAGAYWKGKSSNPILQRIFGTAFFKEADLEADLKRRAEIKERD 239

Query: 246 HRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQH 303
           HR + R++DLF +      G+ +W  KG  I + +  Y+  +++   Y+ + TP +++  
Sbjct: 240 HRTIGRDLDLFFVDPKVGAGLPYWMPKGATIRRIIERYIVDKEVAAGYQHVYTPVLMNLD 299

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
            ++ SGHW  YR +MF          +     L+PMNCP H+ ++ H ++SYRELP+R+A
Sbjct: 300 AYKTSGHWAHYREDMFPPMGMG----EGEMLELRPMNCPSHIQIYKHHIRSYRELPIRIA 355

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           E G ++R E SG+L GL RVR  T +D H F   +Q+  E  +   +I+ +Y DF     
Sbjct: 356 ELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQVQEEFARTLQIIMDVYHDFDINDY 415

Query: 424 MVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
             +LS R  K       +D +W+ +++++K  +D +       ++     GE AFYGPK 
Sbjct: 416 YFRLSYRDPKNTDKYFANDEMWERSQSMLKAAMDDMG------LDYVEAEGEAAFYGPKL 469

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +   K A+G D    TIQ+DF LP RF   Y+ +  E+  PVMIHR + G++ERFI  + 
Sbjct: 470 DIQTKTALGNDETMSTIQLDFMLPERFELSYIGADGEEHRPVMIHRGIVGTMERFIAYLT 529

Query: 540 ENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           E +KG  P WL+P+QA +  +   +  +YA+++ + L +     E DFRNE + YKIRE 
Sbjct: 530 EIYKGAFPTWLAPVQAEIIPVNLDAHSDYAKKVRDELVAKGFRAEIDFRNEKLGYKIRES 589

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
             +K+P  ++ GD E +  ++ +R +G+      SL + +  L+K+
Sbjct: 590 QTQKVPYTLVLGDDEMNAGTVNVRPYGTEEQNSESLAEFMDKLSKD 635


>gi|126663528|ref|ZP_01734525.1| threonine--tRNA ligase (threonine tRNA synthetase) [Flavobacteria
           bacterium BAL38]
 gi|126624476|gb|EAZ95167.1| threonine--tRNA ligase (threonine tRNA synthetase) [Flavobacteria
           bacterium BAL38]
          Length = 633

 Score =  578 bits (1489), Expect = e-162,   Method: Composition-based stats.
 Identities = 242/636 (38%), Positives = 373/636 (58%), Gaps = 23/636 (3%)

Query: 19  VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSC 77
             AT  DVA+SIS  LA+  ++ + NG   + +  +     + + T  D        HS 
Sbjct: 3   KGATPMDVAKSISEGLARNVISASYNGTTIETTTTLTTDGTLVLYTWNDVAGKKAFWHST 62

Query: 78  AHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQIEKKMQEIIARDSPF 136
           +H+MA+A++ ++P +++ +GP I++GFYYD D  EQ  +  +  +IE ++ EI      F
Sbjct: 63  SHVMAQALEELFPGIKLTLGPAIDNGFYYDVDFGEQRITDADFKKIEDRVLEISREKHEF 122

Query: 137 LKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKK 196
             + +S  +A ++++     YK E++ ++     +T      +FDLCRG H+ +TG +K 
Sbjct: 123 KMRPVSKAEALDVYK--DNEYKTELISNL-EDGTITFCDHANFFDLCRGGHIPNTGIIK- 178

Query: 197 FFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLF 256
             K++ VAGAYWRGD     L+R+YG ++  Q++LT YL  LEE+++RDHRKL +E+DLF
Sbjct: 179 AMKILSVAGAYWRGDEKNKQLTRVYGISFPKQKDLTDYLELLEEAKRRDHRKLGKELDLF 238

Query: 257 HIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSY 314
           H +     G+  W  KG  +   L  ++++ + K  YE++ TP +  + L+  SGH+  Y
Sbjct: 239 HFSPKVGQGLPLWLPKGAALRDRLEQFLKKAQKKAGYEQVVTPHIGMKDLYVTSGHYAKY 298

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
            A+ F       T  +   F LKPMNCP H  ++N    SY++LP R AEFG+VYR E S
Sbjct: 299 GADSFQ---PIHTPAEGEEFLLKPMNCPHHCEIYNARPWSYKDLPKRYAEFGTVYRYEQS 355

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR---- 430
           G LHGL RVRGFTQDDAH+FCT +Q+  E   + +L++ ++   GFE    ++S R    
Sbjct: 356 GELHGLTRVRGFTQDDAHIFCTPDQLDTEFKNVIDLVLYVFGSLGFENFTAQVSVRDLDN 415

Query: 431 PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRD 490
           P+K +GS   W+ AEN +              +N  +  GE AFYGPK ++++KDA+GR 
Sbjct: 416 PDKYIGSVENWEKAENAIISAAKD------KGLNYVIEAGEAAFYGPKLDFMVKDALGRS 469

Query: 491 WQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL 550
           WQ GTIQVD+NLP RF   Y  S  +   PVMIHRA FGS+ERFI I++E+  GN P+WL
Sbjct: 470 WQLGTIQVDYNLPERFELTYKGSDDKLHRPVMIHRAPFGSMERFIAILLEHTAGNFPIWL 529

Query: 551 SPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
            P QAI+ +++     YA+++ +LL++H +    D RNETI  KIRE  + K P ++I G
Sbjct: 530 MPEQAIILSLSEKYENYAKKVLDLLENHEIRALIDNRNETIGKKIREAEMNKYPFMLIVG 589

Query: 611 DKEASERSIGIRRFGSTTTQKVSL--LDAIPILTKE 644
           ++E    +I +R+ G      +S+       ++ +E
Sbjct: 590 EEEEKNGTISVRQRGQEGKGNISVTIEQFAAMINEE 625


>gi|291398043|ref|XP_002715638.1| PREDICTED: threonyl-tRNA synthetase 2, mitochondrial [Oryctolagus
           cuniculus]
          Length = 718

 Score =  578 bits (1489), Expect = e-162,   Method: Composition-based stats.
 Identities = 227/659 (34%), Positives = 355/659 (53%), Gaps = 28/659 (4%)

Query: 2   PSDIKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
              IK++ P G  +     + T   +A+ IS +LA  AVA  +NG++ DL  P+  +  +
Sbjct: 58  SRTIKISLPGGQKVDAVAWNTTPYQLAQQISSTLADTAVAAQVNGELYDLERPLETDSDL 117

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD--KEQPFSSD 117
             +T + P   AV  HS  H++  A +  +    +  GP  E GFY+DF   KE+     
Sbjct: 118 RFLTFDSPEGKAVFWHSSTHVLGAAAEQ-FLGAVLCRGPSTECGFYHDFFLGKERTVQGS 176

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           EL  +E+  QE  A   PF +   S ++ R+LF+     +K+ ++E        T+Y  G
Sbjct: 177 ELPVLERICQEFAASAQPFRRLEASRDQLRQLFK--DNPFKLHVIEEKVTGPQATVYGCG 234

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
              DLCRGPH+R TGQ+ +  KL+  + + WR       L R+ G ++ T   L  +  +
Sbjct: 235 TLVDLCRGPHLRHTGQIGEI-KLLTNSSSLWRSSGLPETLQRVSGISFPTTALLRAWEAW 293

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINT 296
            E++E RDHR++ +E +LF   E   G  F+  +G +++  L++++R +     + E+ T
Sbjct: 294 REQAELRDHRRIGKEQELFFFHELSPGSCFFLPRGTRVYNALVAFIRAEYAHRGFSEVKT 353

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCAD-----------DTIKDLRTFALKPMNCPGHV 345
           P +    LW++SGHW+ Y+ +MFA++ +D            T +   T ALKPMNCP H 
Sbjct: 354 PTLFSTKLWEKSGHWEHYKEDMFALQPSDSDSSACSQSDHPTSQPPDTLALKPMNCPAHC 413

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +F H  +S+RELP+RLA+FG+++R E SGSL GL R+R F QDDAH+FC  +Q+  E  
Sbjct: 414 LMFAHRPRSWRELPLRLADFGALHRAEASGSLGGLTRLRCFQQDDAHIFCAPDQLEAEIY 473

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
              + + S+Y   GF   +  LSTRP   +G   LWD AE +++  L+            
Sbjct: 474 GCLDFLRSVYAVLGFSFHLA-LSTRPSGFLGEPCLWDQAEQLLQQSLEAFGEPWD----- 527

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
            +  G+GAFYGPK +  L+DA+GR  QCGTIQ+DF LP RF+  Y         PV+IHR
Sbjct: 528 -LSPGDGAFYGPKIDVHLRDALGRPHQCGTIQLDFQLPLRFDLQYKGQAGNLERPVLIHR 586

Query: 526 AVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD 585
           AV GS+ER +G++ E+  G  PLWLSP Q  V  + +   EYA+E+   L++  L+ + D
Sbjct: 587 AVLGSVERLLGVLAESCGGKWPLWLSPFQVAVIPVGTEQEEYAREVQQTLQAAGLASDLD 646

Query: 586 FRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
                T++ ++R   +       + G KE S R++ +R   +    +  L +A   L +
Sbjct: 647 ADPGLTLSRRVRRAQLAHYNFQFVVGRKEQSNRTVNVRTRDNQRLGERGLAEATRRLLE 705


>gi|318057114|ref|ZP_07975837.1| threonyl-tRNA synthetase [Streptomyces sp. SA3_actG]
 gi|318075787|ref|ZP_07983119.1| threonyl-tRNA synthetase [Streptomyces sp. SA3_actF]
          Length = 658

 Score =  578 bits (1489), Expect = e-162,   Method: Composition-based stats.
 Identities = 258/662 (38%), Positives = 383/662 (57%), Gaps = 38/662 (5%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           SD+++     S ++  V  TG+  A+       +  VA  ++G++ DL+  + EG ++E 
Sbjct: 2   SDVRVIIQRDSERDERVVTTGTTAADLFPGE--RTVVAARVDGELRDLAYVLGEGETVEP 59

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +       L ++RHS AH+MA+AVQ I+PE ++ IGP ++DGFYYDFD E+PF+ ++L  
Sbjct: 60  VEISSEDGLNILRHSTAHVMAQAVQEIFPEAKLGIGPPVKDGFYYDFDVEKPFTPEDLKA 119

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPA------------KE 169
           +EKKMQEI  R   F ++ +S + AR   E   E YK+E++                   
Sbjct: 120 VEKKMQEIQKRGQRFSRRVVSEDDARA--ELADEPYKLELIGLKGGSTSEDGSAVEVGGN 177

Query: 170 NVTLYRQGE-------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYG 222
            +T+Y   +       W DLCRGPH+ +T  +  F KLM+ A AYWRG    PML RIYG
Sbjct: 178 ELTIYDNLDAKTGELCWKDLCRGPHLPTTRLIPAF-KLMRNAAAYWRGSEKNPMLQRIYG 236

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLIS 281
           TAW ++ EL  +L FL E+EKRDHRKL  E+DLF   E+ G G+  +H KG  I + +  
Sbjct: 237 TAWPSKDELKAHLDFLAEAEKRDHRKLGNELDLFSFPEEVGPGLAVFHPKGGIIRRAMED 296

Query: 282 YMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
           Y RR   ++ YE + +P      L+Q+SGH D Y   M+     D    +   + LKPMN
Sbjct: 297 YSRRRHEEEGYEFVYSPHTTKGALFQKSGHLDWYADGMYPPMQLD----EGVDYYLKPMN 352

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
           CP H  +F+   +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDDAH++CTKEQM
Sbjct: 353 CPMHNLIFDARGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRSRGFTQDDAHIYCTKEQM 412

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDTIKNSS 459
             E  K    ++++ +D+G +   ++LST+ EK  VGSD +W++A   ++ V +      
Sbjct: 413 AEELDKTLTFVLNLLRDYGLDDFYLELSTKDEKKFVGSDEVWEEATATLRQVAE------ 466

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
           +  +      G  AFYGPK     +DAIGR WQ  T+Q+DFNLP RF+  Y  +   +  
Sbjct: 467 KQGLPLVPDPGGAAFYGPKISVQARDAIGRTWQMSTVQLDFNLPERFDLSYTAADGSRQR 526

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH 579
           PVMIHRA+FGSIERF  +++E++ G +P WL+P+QA+   +  + V Y +E A   +   
Sbjct: 527 PVMIHRALFGSIERFFAVLLEHYAGAMPPWLAPVQAVGIPVGDAHVPYLKEFAAEARRKG 586

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
           L ++ D  ++ +  KIR H  +K P ++I GD + +  ++  R    +    +   +AI 
Sbjct: 587 LRVDVDASSDRMQKKIRNHQKQKTPFMVIVGDDDMNAGTVSFRHRDGSQENGIPKDEAIA 646

Query: 640 IL 641
            L
Sbjct: 647 KL 648


>gi|210634040|ref|ZP_03297958.1| hypothetical protein COLSTE_01876 [Collinsella stercoris DSM 13279]
 gi|210158984|gb|EEA89955.1| hypothetical protein COLSTE_01876 [Collinsella stercoris DSM 13279]
          Length = 587

 Score =  577 bits (1488), Expect = e-162,   Method: Composition-based stats.
 Identities = 246/593 (41%), Positives = 365/593 (61%), Gaps = 19/593 (3%)

Query: 55  REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQP 113
            +GS+  +      +L +IRHS AHIMA+A++ ++PE   A GP  ++GFYYD D  +  
Sbjct: 6   NDGSVAEV-ESAEEALHIIRHSAAHIMAQAIKRLYPEADFAYGPATDNGFYYDVDLGDAT 64

Query: 114 FSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTL 173
            S D+L  IE +M++I   +  F    L   +A  L E + E YKVE +  +P    +T 
Sbjct: 65  LSEDDLPAIEAEMKKIAKENLKFSVFELPRAEAIALMEERGEKYKVEHIGDLPEDARITF 124

Query: 174 YRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQ 233
           ++QG++ D+C GPH+  T  +K F KL  V+GAYW+ D+N  ML+R+ GTA+ T+ EL  
Sbjct: 125 FQQGDYIDMCVGPHLTYTKALKAF-KLTGVSGAYWKADANNKMLTRVNGTAFATKDELDA 183

Query: 234 YLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYE 292
           +L  LEE++KRDHR++ REMDLF + ++  G  F+   G  +  TL+ Y R    K  Y 
Sbjct: 184 HLTMLEEAKKRDHRRIGREMDLFMMRDEAPGFPFFLPNGMILKNTLLDYWREIHHKAGYV 243

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           EI+TPQ+++  LW+ SGHWD Y+ NM++         D   + +KPMNCPG V V+    
Sbjct: 244 EISTPQIMNSQLWKTSGHWDHYKDNMYSTMI------DGEEYCIKPMNCPGGVLVYASKP 297

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
            SYRELP+R  E G V+R+E  G+LHGL RVR F QDDAH+F T EQ+ +E + + NLI 
Sbjct: 298 HSYRELPIRAGEIGLVHRHELKGALHGLFRVRCFNQDDAHLFVTPEQLTDEIVGVVNLIT 357

Query: 413 SIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
           S+Y  FGF   + +LSTRPE  +GSD  W+ AE  +K  L+ +       +   V  G+G
Sbjct: 358 SVYDKFGFTYHL-ELSTRPEDSMGSDEDWERAEAGLKTALERLG------MEYVVNEGDG 410

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           AFYGPK ++ L+D++GR WQCGT+Q+DF +P  F+  YV++   K  P+M+HR  FGSIE
Sbjct: 411 AFYGPKIDFHLEDSLGRTWQCGTVQLDFQMPQNFDLEYVDADGTKKRPIMLHRVCFGSIE 470

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
           RFIGI+IE+F G  P+WL+P+Q  V  ++  + +YA E+   L++  + +  D R+E I 
Sbjct: 471 RFIGILIEHFAGKFPVWLAPMQVKVLPVSEKSRDYAHEVTAKLEAAGIRVVCDDRDEKIG 530

Query: 593 YKIREHS-IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           YKIRE     ++P ++I G+KE    +I +R   +  T  + + + I  + +E
Sbjct: 531 YKIREARGTDRVPYMLILGEKEVEAGNISVRDR-TNETVPMGVDEFIAKVREE 582


>gi|302533417|ref|ZP_07285759.1| threonyl-tRNA synthetase [Streptomyces sp. C]
 gi|302442312|gb|EFL14128.1| threonyl-tRNA synthetase [Streptomyces sp. C]
          Length = 658

 Score =  577 bits (1488), Expect = e-162,   Method: Composition-based stats.
 Identities = 265/664 (39%), Positives = 386/664 (58%), Gaps = 38/664 (5%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           SD+++     S ++  V ATG+  AE  +    +  VA  I G++ DLS  V++G ++E 
Sbjct: 2   SDVRVIIQRDSERDERVVATGTTAAELFAGE--RTIVAARIAGELKDLSYEVKDGETVEP 59

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +       L ++RHS AH+MA+AVQ ++PE ++ IGP + DGFYYDFD  +PF+ D+L  
Sbjct: 60  VEISSEDGLNILRHSTAHVMAQAVQELFPEAKLGIGPPVRDGFYYDFDVAKPFTPDDLKT 119

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIP------------AKE 169
           IEKKMQEI  R   F ++ +S E ARE  E   E YK+E++                   
Sbjct: 120 IEKKMQEIQKRGQKFARRVVSDEAARE--ELADEPYKLELIGIKGSASTDDGANVEVGGG 177

Query: 170 NVTLYRQGE-------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYG 222
            +T+Y   +       W DLCRGPH+ +T  +  F KLM+ A AYWRG    PML RIYG
Sbjct: 178 ELTIYDNLDAKTGELCWKDLCRGPHLPTTRNIPAF-KLMRNAAAYWRGSEKNPMLQRIYG 236

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLIS 281
           TAW +++EL  +L FL E+EKRDHRKL  E+DLF I ++ GSG+  +H +G  I + +  
Sbjct: 237 TAWPSKEELKAHLDFLAEAEKRDHRKLGNELDLFSIPDEIGSGLAVFHPRGGIIRRVMED 296

Query: 282 YMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
           Y RR   ++ YE + +P      L+++SGH D Y   M+     D        + LKPMN
Sbjct: 297 YSRRRHEEEGYEFVYSPHATKGALFEKSGHLDWYAEGMYPPMQLDG----GTDYYLKPMN 352

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
           CP H  +F+   +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDDAH++CT+EQM
Sbjct: 353 CPMHNLIFDARGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYCTREQM 412

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDTIKNSS 459
             E  +    ++++ +D+G     ++LST+  +  VGSD +W++A  +++ V +      
Sbjct: 413 AEELDRTLTFVLNLLRDYGLTDFYLELSTKDPEKFVGSDEVWEEATAVLQQVAE------ 466

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
           +  +      G  AFYGPK     +DAIGR WQ  T+Q+DFNLP RF+  Y      +  
Sbjct: 467 KQGLPLTPDPGGAAFYGPKISVQARDAIGRTWQMSTVQLDFNLPERFDLEYTGPDGSRQR 526

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH 579
           PVMIHRA+FGSIERF  +++E++ G +P WL+P+QA+   I    VEY QE A   K   
Sbjct: 527 PVMIHRALFGSIERFFAVLLEHYAGAMPPWLAPVQAVGIPIGDGHVEYLQEFAAAAKKQG 586

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
           L +E D  ++ +  KIR H   K+P +II GD++ +  ++  R    +    +   +A+ 
Sbjct: 587 LRVEVDASSDRMQKKIRNHQKLKVPFMIIVGDEDMAAGTVSFRYRDGSQENGIPKDEALA 646

Query: 640 ILTK 643
            L K
Sbjct: 647 KLAK 650


>gi|302922168|ref|XP_003053410.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256734351|gb|EEU47697.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 741

 Score =  577 bits (1488), Expect = e-162,   Method: Composition-based stats.
 Identities = 241/668 (36%), Positives = 360/668 (53%), Gaps = 39/668 (5%)

Query: 3   SDIKLTFPDGSIKN-FPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIE 60
            +I ++ P+G          T   +A+ IS+SL ++ V   ++G++ DL+ P+ +   +E
Sbjct: 75  EEITISLPNGKEHTGTSWETTPFSIAKGISKSLLERTVISIVDGELWDLTRPLEKSCKLE 134

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIED--GFYYDF--DKEQPFSS 116
           ++  E P    V  HS AHI+ EA +  +    +  GP  ED  GFYYD     EQ  + 
Sbjct: 135 LLDFEHPEGKKVFWHSSAHILGEAAERRF-GCYLCNGPPTEDPPGFYYDMANMGEQVIAD 193

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
           ++   +E+    II +  PF +  ++ ++  E+F+  K      I + +P     T+YR 
Sbjct: 194 EDKKALEQLSNSIIKQKQPFERLEMTKDELLEMFKYSKYKE-YFINQRVPDGTKSTVYRC 252

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           G   DLCRGPHV +TG +K F  L + + AYW GDSN   + RI G ++  +++L +Y +
Sbjct: 253 GPLIDLCRGPHVPTTGNIKAFSVL-RNSAAYWLGDSNNESVQRIAGISFPDKKQLEEYKH 311

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEIN 295
           FL E+ KR+HRK+ ++  LF   E   G  F+   G +I+  L+  ++ + +   + E+ 
Sbjct: 312 FLAEAAKRNHRKIGQDQKLFFFDEVSPGSTFFLPHGVRIYNALMDLLKGEYRKRGFTEVM 371

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           +P V    LW+ SGHW  Y  NMF          +   + LKPMNCPGH  +F H   SY
Sbjct: 372 SPNVYKSDLWKISGHWGHYEENMFTFDV------EKERYGLKPMNCPGHCKIFAHSDVSY 425

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           ++LP R+A+FG ++RNE SG+L GL RVR F QDDAH+FCT +Q+ +E     + + ++Y
Sbjct: 426 KDLPWRMADFGVLHRNEFSGALSGLTRVRRFQQDDAHIFCTVDQIRDEIESAFDFLSAVY 485

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
             FGF    +KLSTRPEK VG  A WD AE  ++  L++    +  +       G+GAFY
Sbjct: 486 GLFGF-SFKLKLSTRPEKYVGDIATWDIAEQKLQEALESFAKKTNAK--WEFNPGDGAFY 542

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC----------------H 519
           GPK +  L DA+ RD QCGTIQ+DFNLP RF   YV    E                   
Sbjct: 543 GPKIDITLYDALRRDHQCGTIQLDFNLPRRFKLRYVAGKDESGVSDGSDPSEDLPAGYSR 602

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH 579
           PVMIHRAV GS ER  G++ E+F G  P WLSP Q +V  +  +  +YA+EI  + +   
Sbjct: 603 PVMIHRAVLGSFERMFGVLAEHFAGKWPFWLSPRQILVVPVMPAVNDYAKEIQQIFQEKE 662

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK----VSLL 635
           L I+ D  + T   KIR   +++   I + G +EA  R++ IR      TQ     V + 
Sbjct: 663 LYIDVDLSSNTFQKKIRTGQLEQYNFIFVVGAEEAKSRTVNIRNRDDQATQTKGELVPID 722

Query: 636 DAIPILTK 643
           +A+  L K
Sbjct: 723 EALESLVK 730


>gi|284031290|ref|YP_003381221.1| threonyl-tRNA synthetase [Kribbella flavida DSM 17836]
 gi|283810583|gb|ADB32422.1| threonyl-tRNA synthetase [Kribbella flavida DSM 17836]
          Length = 673

 Score =  577 bits (1488), Expect = e-162,   Method: Composition-based stats.
 Identities = 260/662 (39%), Positives = 378/662 (57%), Gaps = 42/662 (6%)

Query: 13  SIKNFPVHATGSDV-AESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPEDPRSL 70
           + ++     T  ++ AE   +   + A+A  +NG++ DLS  V +G  IE +        
Sbjct: 15  AERSVTETTTIGELFAELFGQD--RSAIAARVNGELRDLSRVVADGDEIEPVKAGSEDGR 72

Query: 71  AVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEII 130
           A+IRHS AH++A+AVQ ++PE ++ IGP +E+GFYYDFD   PF+ D+L ++EKKMQ+II
Sbjct: 73  AIIRHSTAHVLAQAVQELFPEAKLGIGPPVENGFYYDFDVPTPFTPDDLGKLEKKMQQII 132

Query: 131 ARDSPFLKQYLSHEKARELFESKKEAYKVEILE-------------------SIPAKENV 171
                F ++ +S + AR   E   E YK+E++                     +   +NV
Sbjct: 133 KERQRFSRRVVSDDDAR--TELAAEPYKLELIGIKGSAADAAEGASVEVGGGELTIYDNV 190

Query: 172 TLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQEL 231
                  W DLCRGPHV +TG +  F KLM+ A AYWRG    P L RIYGTAW ++ EL
Sbjct: 191 RRDDSVAWKDLCRGPHVPATGYLGNF-KLMRTAAAYWRGSEKNPQLQRIYGTAWESRDEL 249

Query: 232 TQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKD 289
             YL  LEE+ KRDHRKL  E+DLF   ++ GSG+  +H KG  + + +  Y R R ++D
Sbjct: 250 KAYLTRLEEAAKRDHRKLGTELDLFSFPDEIGSGLAVFHPKGGVLRKVMEDYSRQRHVED 309

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTI-------KDLRTFALKPMNCP 342
            YE + TP +   HL++ SGH D Y   M+     D+         K  + + LKPMNCP
Sbjct: 310 GYEFVYTPHITKAHLFETSGHLDWYADGMYPPMHLDEERGPDGELRKQGQDYYLKPMNCP 369

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN 402
            H  +F+   +SYRELP+RL EFG+VYR E SG +HG+ R RGFTQDDAH++CT+EQM +
Sbjct: 370 MHNLIFDARGRSYRELPLRLFEFGTVYRLEKSGVIHGMTRARGFTQDDAHIYCTREQMRD 429

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLS-TRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
           E   +   ++ +  D+G +   ++LS   PEK VGSD +W +A   ++ V  +       
Sbjct: 430 ELKNLLTFVLGLLADYGLDDFYLELSTKNPEKFVGSDEVWQEATETLREVAVSSG----- 484

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
            +      G  AFYGPK     +DAIGR WQ  TIQ+DFNLP RF   Y  S   +  PV
Sbjct: 485 -LELVPDPGGAAFYGPKISVQARDAIGRTWQMSTIQLDFNLPERFELEYTASDGSRQRPV 543

Query: 522 MIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLS 581
           MIHRA+FGSIERF+ ++ E++ G  P WL+P+Q I   IT   V+Y  ++A  LK+  + 
Sbjct: 544 MIHRALFGSIERFVAVLTEHYAGVFPPWLAPVQVIGIPITDGHVDYLYQVAAQLKAQGIR 603

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           IE D  ++ +  KIR     K+P ++I GD++ +  S+  R    +    + + DA+  +
Sbjct: 604 IEIDASDDRMQKKIRNAQKAKVPYMLIAGDEDMAAGSVSFRYRDGSQKNGIPIADAVAEI 663

Query: 642 TK 643
            +
Sbjct: 664 VE 665


>gi|225574947|ref|ZP_03783557.1| hypothetical protein RUMHYD_03026 [Blautia hydrogenotrophica DSM
           10507]
 gi|225037794|gb|EEG48040.1| hypothetical protein RUMHYD_03026 [Blautia hydrogenotrophica DSM
           10507]
          Length = 667

 Score =  577 bits (1488), Expect = e-162,   Method: Composition-based stats.
 Identities = 234/655 (35%), Positives = 366/655 (55%), Gaps = 20/655 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T  DGS+K +  + T  ++A  IS  LA+ A A  ++G++ DL   + ++ ++ I+T  
Sbjct: 19  ITLKDGSVKEYSDNKTIYEIAYDISEGLARAACAGEVDGQIKDLRTVLNKDCTLNILTAN 78

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D + LA +RH+ +H++AEAV+ ++P  +VAIGP I+ GFYYDF+ E PFS ++L +IE++
Sbjct: 79  DEKGLAALRHTASHVLAEAVKRLYPHAKVAIGPSIDTGFYYDFECE-PFSQEDLDKIEQE 137

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M++I+   +   +  +  E+A   F+ K+E YKVE++E +P    ++ Y QG + DLC G
Sbjct: 138 MKKIVKEGAKIERYTMPREEAIAYFKEKEEPYKVELIEDLPEDAEISFYSQGGFTDLCAG 197

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PH+ ST  VK F KL+  +GAYWRGD  R ML+R+YGTA+  + EL  YL  LEE++KRD
Sbjct: 198 PHLMSTKGVKAF-KLLSSSGAYWRGDEKRQMLTRVYGTAFGKKDELKAYLEQLEEAKKRD 256

Query: 246 HRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEINTPQVLDQ 302
           H KL REM+LF      G G+     KG  I + L  ++     +   Y    TP +   
Sbjct: 257 HNKLGREMELFTTVDVIGQGLPLLMPKGVIILKELQRWIEDLEDNEWGYIRTKTPLMAKS 316

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            L++ SGHWD Y+  MF +    D  KD   +AL+PM CP    V+     SYRELP+R 
Sbjct: 317 DLYKISGHWDHYKDGMFVL---GDEEKDKEVYALRPMTCPFQYYVYKASQHSYRELPLRY 373

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           +E  +++RNE SG +HGL RVR FT  +AH+    +Q+  E  K   L   +    G + 
Sbjct: 374 SETSTLFRNEDSGEMHGLTRVRQFTITEAHLITRPDQIDEEFKKCVQLAKFVLTTLGLQD 433

Query: 423 IMVKL-----STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
            +            EK +G    W+ ++N M+ +L+ ++      ++     GE AFYGP
Sbjct: 434 DVTYRLSKWDPNNTEKYIGDAQYWETSQNKMRELLNELE------LDFVEADGEAAFYGP 487

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +   K+  G++    TIQ+DF L  +F+ +Y++ + EK  P +IHR   G  ER +  
Sbjct: 488 KLDIQAKNVYGKEDTMITIQLDFALAEQFHMYYIDENGEKKMPFIIHRTSMGCYERTLAW 547

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE + G  P WL P Q  V  I+   ++YA ++   LK++ +    D R+E I YKIRE
Sbjct: 548 LIEKYAGLFPTWLCPEQVRVLPISEKYLDYANQVNAQLKANGIRSSVDDRSEKIGYKIRE 607

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
             ++K+P +++ G KE  E  + +R           L   I  + +E    + +K
Sbjct: 608 SRLQKVPYMLVVGAKEEQEEKVSVRSRYLGDEGMKDLKSFIDHICEEIRTKEIRK 662


>gi|332287873|ref|YP_004422774.1| threonyl-tRNA synthetase [Chlamydophila psittaci 6BC]
 gi|313848445|emb|CBY17449.1| threonyl-tRNA synthetase [Chlamydophila psittaci RD1]
 gi|325506736|gb|ADZ18374.1| threonyl-tRNA synthetase [Chlamydophila psittaci 6BC]
 gi|328915135|gb|AEB55968.1| threonyl-tRNA synthetase [Chlamydophila psittaci 6BC]
          Length = 635

 Score =  577 bits (1487), Expect = e-162,   Method: Composition-based stats.
 Identities = 251/632 (39%), Positives = 365/632 (57%), Gaps = 19/632 (3%)

Query: 16  NFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIR 74
             P   T +D A  I  S     V   IN ++ DLS  + EG ++  +T  DP    +  
Sbjct: 12  ELPEGTTAADFASKIKNSHYFAGVV--INDQIKDLSTTLNEGDTLRFVTFTDPEGREIFL 69

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDS 134
           H+ AHI+A+A+  +WP+    IGP+I+ GFYYDF      S D+   IE  M +I     
Sbjct: 70  HTSAHILAQAILRLWPDAIPTIGPVIDQGFYYDFA-NLSISEDDFLMIENMMGQISEAKF 128

Query: 135 PFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQV 194
              K+  ++++   L E     +KVE+++ +P  E++T Y QGE+ DLCRGPH+ ST  V
Sbjct: 129 AVQKKTFNNKQ-EALNEFANNPFKVELIQELPEGESITAYSQGEFMDLCRGPHLPSTAPV 187

Query: 195 KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMD 254
           K F KL++ + AYWRGD  R  L RIYG A+ T +EL ++L+ LEE+++RDHR L  ++D
Sbjct: 188 KAF-KLLRTSAAYWRGDPQRESLVRIYGVAFPTTKELKEHLHQLEEAKQRDHRVLGTKLD 246

Query: 255 LFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDS 313
           LF   E  +G+ F+H +G  I+  LI Y +R      Y+EI TPQ++++ LW+ SGHW +
Sbjct: 247 LFSQQECSAGMPFFHPRGMIIWDALIGYWKRLHQLAGYKEIQTPQLMNRSLWEVSGHWSN 306

Query: 314 YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP 373
           YR NM+ +K       D   +A+KPMNCPG +  +   L SY++ P+R+AE G V+R E 
Sbjct: 307 YRENMYTLKI------DDEDYAIKPMNCPGCMLYYKTRLHSYKQFPLRIAEIGHVHRYEV 360

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
           SG+L GLMRVR F QDDAHVF T EQ+  E L I +L+  +Y  FG E  +   +   + 
Sbjct: 361 SGALSGLMRVRAFHQDDAHVFLTPEQVEEETLNILHLVSELYSTFGLEYHLELSTRPEKA 420

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
            +GSD LW+ A   ++  L              +  G+GAFYGPK +  +KDAI R WQC
Sbjct: 421 TIGSDELWELATAALERALINSNTP------FIINPGDGAFYGPKIDIHVKDAIQRTWQC 474

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI 553
           GTIQ+D  LP RF   Y N+  EK  PVM+HRA+FGSIERF+GI+IE+FKG  PLWLSP 
Sbjct: 475 GTIQLDMFLPERFELEYTNAQGEKSTPVMLHRALFGSIERFLGILIEHFKGRFPLWLSPE 534

Query: 554 QAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
              + T+       AQ++A   +   L +  D  NE+++ KIR     ++  ++  GD+E
Sbjct: 535 HIRLITVADRHQPRAQKLATAWQKLGLIVTVDDSNESVSKKIRNAQNMQVNYMVTLGDRE 594

Query: 614 ASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
             + ++ IR   +     ++    I  + +E 
Sbjct: 595 IEQNTLAIRTRDNRVLNDMTEDKFINTILEEK 626


>gi|241889888|ref|ZP_04777186.1| threonyl-tRNA synthetase [Gemella haemolysans ATCC 10379]
 gi|241863510|gb|EER67894.1| threonyl-tRNA synthetase [Gemella haemolysans ATCC 10379]
          Length = 647

 Score =  577 bits (1487), Expect = e-162,   Method: Composition-based stats.
 Identities = 244/650 (37%), Positives = 392/650 (60%), Gaps = 26/650 (4%)

Query: 6   KLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII-- 62
           KL FPDG+++ +    T  ++AESIS SL KK ++  ++    +++ P+ ++G +++I  
Sbjct: 3   KLVFPDGNVREYDNK-TPLEIAESISVSLKKKVISAKLDEDYIEVNKPITKDGHLKLIVA 61

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWP-EVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
             ED  SL V+RH+CAH++A+A++ ++  +V   +GP I+ GFYYDFD E   S ++   
Sbjct: 62  DDEDKDSLYVLRHTCAHVLAQALRRLYGKDVHFGVGPAIDGGFYYDFDAEYKVSEEDFKA 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK++++II+ +     + +S E+A E+F+   + YKVE++  +PA E +T+Y QG++ D
Sbjct: 122 IEKEVKKIISENYAIEGREVSKEEALEIFKE--DPYKVELINDLPADEVITVYTQGDFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG H+ +T ++K+F KL+ VAGAYWRG+S+  ML RIYGTA+ T++ L Q+L  L+E+
Sbjct: 180 LCRGGHLSATSKIKEF-KLLSVAGAYWRGNSDNKMLQRIYGTAYFTKEHLEQHLVRLQEA 238

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQV 299
            +RDHRKL +E+ +F  ++    G+  W   G  I +T+  Y+  K  +  Y+ + TP +
Sbjct: 239 RERDHRKLGKELGIFTTSQKVGAGLPLWLPNGATIRRTIERYIVDKEVELGYDHVYTPIM 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             + L+  SGHW+ Y+ +MF     D       T  L+PMNCP H+ V+ +   SYRELP
Sbjct: 299 GSKDLYITSGHWEHYQEDMFPPMEMDH-----ETMVLRPMNCPHHMMVYKNERHSYRELP 353

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG++ GL RVRG T +DAH+F   +Q+ +E      LI   YKD G
Sbjct: 354 IRIAELGMMHRYEASGAVSGLQRVRGMTLNDAHIFVRPDQLKDEFKLTVGLIEEAYKDLG 413

Query: 420 FEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
            +    +LS R      K    DA+W++A+ ++K   D +       ++     GE AFY
Sbjct: 414 IKNFSYRLSYRDPENTEKYFDDDAMWNNAQQMLKETADELG------LDYVEAEGEAAFY 467

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  ++ AIG+     TIQ+DF LP RF   Y+    +   PV+IHR +  ++ER +
Sbjct: 468 GPKLDVQVETAIGKQETLSTIQLDFLLPERFELEYIGEDGKAHRPVVIHRGIVSTMERMV 527

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             ++E +KG+LP WLSP Q  +  + +    +Y++EI   LK   + +  D R+E + YK
Sbjct: 528 AFLLEEYKGDLPTWLSPNQVRIIPVNNDYHYDYSKEIMQELKKAGVKVAIDDRDEKLGYK 587

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IRE + KKIP  ++ GDKE   R++ +R FGS   ++ S  +    + +E
Sbjct: 588 IREAASKKIPYTLVIGDKEVENRNVNVRTFGSLNQKEESFAEFKENILRE 637


>gi|290961808|ref|YP_003492990.1| threonine-tRNA synthetase [Streptomyces scabiei 87.22]
 gi|260651334|emb|CBG74456.1| threonine-tRNA synthetase [Streptomyces scabiei 87.22]
          Length = 658

 Score =  577 bits (1487), Expect = e-162,   Method: Composition-based stats.
 Identities = 261/664 (39%), Positives = 385/664 (57%), Gaps = 38/664 (5%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           SD+++     S +   V  TG+  A+  +    +  VA  + G++ DL+  VR+G ++E 
Sbjct: 2   SDVRVIIQRDSEREERVVTTGTTAADLFTGE--RTVVAARVAGELKDLAYEVRDGETVEP 59

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +       L ++RHS AH+MA+AVQ ++PE ++ IGP + DGFYYDFD E+PF+ ++L  
Sbjct: 60  VEISSEDGLNILRHSTAHVMAQAVQELFPEAKLGIGPPVRDGFYYDFDVEKPFTPEDLKA 119

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL------------ESIPAKE 169
           +EKKMQEI  R   F ++ ++ E ARE  E   E YK+E++            +      
Sbjct: 120 VEKKMQEIQRRGQRFSRRVVTDEAARE--ELADEPYKLELIGLKGSASSDDGADVEVGAG 177

Query: 170 NVTLYRQGE-------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYG 222
            +T+Y   +       W DLCRGPH+ +T  +  F KLM+ A AYWRG    PML RIYG
Sbjct: 178 ELTIYDNLDAKTGDLCWKDLCRGPHLPTTRNIPAF-KLMRNAAAYWRGSEKNPMLQRIYG 236

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLIS 281
           TAW +++EL  +L FL E+EKRDHRKL  E+DLF I  + GSG+  +H KG  I + +  
Sbjct: 237 TAWPSKEELKAHLDFLAEAEKRDHRKLGNELDLFSIPDQIGSGLAVFHPKGGIIRRVMED 296

Query: 282 YMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
           Y RR   ++ YE + TP      L++ SGH D Y   M+     D    +   + LKPMN
Sbjct: 297 YSRRRHEEEGYEFVYTPHATKGKLFETSGHLDWYADGMYPPMQLD----EGVDYYLKPMN 352

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
           CP H  +F+   +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDDAH++CTKEQM
Sbjct: 353 CPMHNLIFDARGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYCTKEQM 412

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDTIKNSS 459
             E  K    ++++ +D+G     ++LST+  +  VGSD +W+++   ++ V +      
Sbjct: 413 AEELDKTLTFVLNLLRDYGLTDFYLELSTKDPEKFVGSDEIWEESTETLRQVAE------ 466

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
           +  +      G  AFYGPK    +KDAIGR WQ  T+Q+DFNLP RF+  Y      K  
Sbjct: 467 KQGLLLVPDPGGAAFYGPKISVQVKDAIGRTWQMSTVQLDFNLPERFDLEYTGPDGSKQR 526

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH 579
           PVMIHRA+FGSIERF  +++E++ G  P WL+P+QA+   I  + VEY Q+ A   K   
Sbjct: 527 PVMIHRALFGSIERFFAVLLEHYAGAFPAWLAPVQAVGIPIGDAHVEYLQKFAAEAKRKG 586

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
           L ++ D  ++ +  KIR     K+P ++I GD++ +  ++  R    +    + + +AI 
Sbjct: 587 LRVDVDASSDRMQKKIRNAQKAKVPFMVIAGDEDMAAGAVSFRYRDGSQENGIPVEEAIA 646

Query: 640 ILTK 643
            + K
Sbjct: 647 KIAK 650


>gi|85093975|ref|XP_959801.1| threonyl-tRNA synthetase [Neurospora crassa OR74A]
 gi|28921255|gb|EAA30565.1| threonyl-tRNA synthetase [Neurospora crassa OR74A]
          Length = 788

 Score =  577 bits (1487), Expect = e-162,   Method: Composition-based stats.
 Identities = 236/703 (33%), Positives = 363/703 (51%), Gaps = 71/703 (10%)

Query: 3   SDIKLTFPDGSIKNF-PVHATGSDVAESISRSLAKKAVAVAINGK-VCDLSDPVRE-GSI 59
            DI +T PDG+ K       T +++A+ IS SL K+ V   I+G+ + DL  P+ +   +
Sbjct: 77  DDILITMPDGTTKTGKAYETTPAEIAKGISNSLFKRTVVARIDGETLWDLERPLEKSCKL 136

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD--KEQPFSSD 117
           E++   D +   V  HS AHI+ EA +  +    + IGP +++GFYY+          S 
Sbjct: 137 ELLDFNDDQGKFVFWHSSAHILGEACERRF-GCSLCIGPPVDNGFYYEMALPGGAAVQSS 195

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES-IPAKENVTLYRQ 176
           + A +E  + +I+    PF +  +S E   ++       YK  I++  IP     T+YR 
Sbjct: 196 DWAPLENIVTKIVKEKQPFQRLEMSKEDLLKM--FAYNPYKQHIIKDKIPDGTRTTVYRN 253

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           G   DLCRGPHV  T +++ F  +MK + +Y+ GD+N   L RIYG ++  ++++  +  
Sbjct: 254 GPLIDLCRGPHVPDTSRIEAF-AIMKNSSSYFLGDANNDSLQRIYGVSFPDKKQMAAHKK 312

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEIN 295
           FLEE+ KRDHR + ++ +LF+  E   G   W   G +I   ++ Y++ +     Y+E+ 
Sbjct: 313 FLEEAAKRDHRLIGKQQELFYFEECSPGSAMWLPHGMRINNAIMEYIKEEYWKRGYDEVM 372

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP + +  LW+QSGH   Y+ +MF +        D   F LKPMNCP H  +F H  +S+
Sbjct: 373 TPNMFNVALWEQSGHLAHYKDDMFILDV------DKEQFGLKPMNCPAHAMMFRHRDRSH 426

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           +ELP+RLA+FG ++RNE SG+L GL RVR F QDDAH+FC ++Q+  E   + + + S Y
Sbjct: 427 KELPLRLADFGVLHRNEASGALSGLTRVRRFQQDDAHIFCREDQIKAEVADLFDFMKSFY 486

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
              G    + KLSTRPEK +G    WD AE  +K  L+    ++       +  G+GAFY
Sbjct: 487 GMLGLTFKL-KLSTRPEKYMGEIETWDRAEARLKEALNEFVAATGG--TWELNEGDGAFY 543

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC----------------- 518
           GPK +  + D + R WQC TIQ+DF  P  F+  Y+ + ++                   
Sbjct: 544 GPKIDIAVLDCLNRPWQCATIQLDFQQPINFSLEYMTADAQAKQDEDKAASKAAKPEAPK 603

Query: 519 ----------------------------HPVMIHRAVFGSIERFIGIMIENFKGNLPLWL 550
                                        PVMIHRA+ GSIERF  I+ E+F G  P W+
Sbjct: 604 EEEEAPKEGEEKKKKALLVKKPLTAGCARPVMIHRAMAGSIERFTAILAEHFAGKWPFWM 663

Query: 551 SPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           SP Q +V  +    ++YA+E+A  LK   + ++ D    T+  KIR   + +   I + G
Sbjct: 664 SPRQVMVIPVGMGFLDYAKEVALTLKKEKIHVDVDSSGNTLQKKIRSAQLAQYNFIFVVG 723

Query: 611 DKEASERSIGIRRFGSTTTQKV----SLLDAIPILTKESLPPD 649
           D E + R + IR    T+TQ      SL +A+  L   +L  D
Sbjct: 724 DDEKTNRKVNIRYRDDTSTQARDVPYSLEEAVEKLR--ALKAD 764


>gi|302518003|ref|ZP_07270345.1| threonyl-tRNA synthetase [Streptomyces sp. SPB78]
 gi|302426898|gb|EFK98713.1| threonyl-tRNA synthetase [Streptomyces sp. SPB78]
          Length = 658

 Score =  577 bits (1487), Expect = e-162,   Method: Composition-based stats.
 Identities = 258/662 (38%), Positives = 383/662 (57%), Gaps = 38/662 (5%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           SD+++     S ++  V  TG+  A+       +  VA  ++G++ DL+  + EG ++E 
Sbjct: 2   SDVRVIIQRDSERDERVVTTGTTAADLFPGE--RTVVAARVDGELRDLAYVLGEGETVEP 59

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +       L ++RHS AH+MA+AVQ I+PE ++ IGP ++DGFYYDFD E+PF+ ++L  
Sbjct: 60  VEISSEDGLNILRHSTAHVMAQAVQEIFPEAKLGIGPPVKDGFYYDFDVEKPFTPEDLKA 119

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPA------------KE 169
           +EKKMQEI  R   F ++ +S + AR   E   E YK+E++                   
Sbjct: 120 VEKKMQEIQKRGQRFSRRVVSEDDARA--ELADEPYKLELIGLKGGSTSEDGSAVEVGGN 177

Query: 170 NVTLYRQGE-------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYG 222
            +T+Y   +       W DLCRGPH+ +T  +  F KLM+ A AYWRG    PML RIYG
Sbjct: 178 ELTIYDNLDAKTGELCWKDLCRGPHLPTTRLIPAF-KLMRNAAAYWRGSEKNPMLQRIYG 236

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLIS 281
           TAW ++ EL  +L FL E+EKRDHRKL  E+DLF   E+ G G+  +H KG  I + +  
Sbjct: 237 TAWPSKDELKAHLDFLAEAEKRDHRKLGNELDLFSFPEEVGPGLAVFHPKGGIIRRAMED 296

Query: 282 YMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
           Y RR   ++ YE + +P      L+Q+SGH D Y   M+     D    +   + LKPMN
Sbjct: 297 YSRRRHEEEGYEFVYSPHTTKGALFQKSGHLDWYADGMYPPMQLD----EGVDYYLKPMN 352

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
           CP H  +F+   +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDDAH++CTKEQM
Sbjct: 353 CPMHNLIFDARGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRSRGFTQDDAHIYCTKEQM 412

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDTIKNSS 459
             E  K    ++++ +D+G +   ++LST+ EK  VGSD +W++A   ++ V +      
Sbjct: 413 AEELDKTLTFVLNLLRDYGLDDFYLELSTKDEKKFVGSDEVWEEATATLQQVAE------ 466

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
           +  +      G  AFYGPK     +DAIGR WQ  T+Q+DFNLP RF+  Y  +   +  
Sbjct: 467 KQGLPLVPDPGGAAFYGPKISVQARDAIGRTWQMSTVQLDFNLPERFDLSYTAADGSRQR 526

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH 579
           PVMIHRA+FGSIERF  +++E++ G +P WL+P+QA+   +  + V Y +E A   +   
Sbjct: 527 PVMIHRALFGSIERFFAVLLEHYAGAMPPWLAPVQAVGIPVGDAHVPYLKEFAAEARRKG 586

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
           L ++ D  ++ +  KIR H  +K P ++I GD + +  ++  R    +    +   +AI 
Sbjct: 587 LRVDVDASSDRMQKKIRNHQKQKTPFMVIVGDDDMNAGTVSFRHRDGSQENGIPKDEAIA 646

Query: 640 IL 641
            L
Sbjct: 647 KL 648


>gi|317495533|ref|ZP_07953901.1| threonyl-tRNA synthetase [Gemella moribillum M424]
 gi|316914347|gb|EFV35825.1| threonyl-tRNA synthetase [Gemella moribillum M424]
          Length = 647

 Score =  577 bits (1487), Expect = e-162,   Method: Composition-based stats.
 Identities = 244/650 (37%), Positives = 387/650 (59%), Gaps = 26/650 (4%)

Query: 6   KLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII-- 62
           KL FPDG+++ +    T  ++AESIS SL KK ++  ++    +L+ P+ ++G +++I  
Sbjct: 3   KLVFPDGNVREYDNK-TALEIAESISISLKKKVISAKLDEDYIELNKPITKDGHLKLIVA 61

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWP-EVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
             ED  SL V+RHS AH++A+A++ ++  +V   +GP I+ GFYYDFD E   S ++   
Sbjct: 62  DDEDQDSLYVLRHSSAHLLAQALRRLYGKDVHFGVGPAIDGGFYYDFDSEYKISEEDFKN 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK+M++II+ +     + +S  +A E+F +  + YKVE++  +P  E +T+Y QG++ D
Sbjct: 122 IEKEMKKIISENVAIEGREVSRTEALEIFAA--DPYKVELINDLPEDEVITVYTQGDFVD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG HV ST ++K+F KL+ VAGAYWRG+S+  ML RIYGTA+ T++ L Q+L  L+E+
Sbjct: 180 LCRGGHVASTSKIKEF-KLLSVAGAYWRGNSDNKMLQRIYGTAYFTKEHLEQHLVRLQEA 238

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQV 299
            +RDHRKL +E+ +F  ++    G+  W   G  I +T+  Y+  K  +  Y+ + TP +
Sbjct: 239 RERDHRKLGKELGIFTTSQKVGAGLPLWLPNGATIRRTIERYIVDKEVELGYDHVYTPVL 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             + L+  SGHW+ Y+ +MF     D       T  L+PMNCP H+ V+ +   SYRELP
Sbjct: 299 GSKDLYITSGHWEHYQEDMFPPMEMDH-----ETMVLRPMNCPHHMMVYKNERHSYRELP 353

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG++ GL RVRG T +DAH+F   +Q+ +E      LI   YKD G
Sbjct: 354 IRIAELGMMHRYESSGAVSGLQRVRGMTLNDAHIFVRPDQLKDEFKLTVGLIEEAYKDLG 413

Query: 420 FEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                 +LS R      K    D +W++A+ ++K   D +       ++     GE AFY
Sbjct: 414 ITNFSYRLSYRDPENTEKYFDDDVMWNNAQQMLKETADELG------LDYVEAEGEAAFY 467

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  ++ AIG+     TIQ+DF LP RF   Y+    +   PV+IHR +  ++ER +
Sbjct: 468 GPKLDVQVETAIGKQETLSTIQLDFLLPERFELEYIGEDGKAHRPVVIHRGIVSTMERMV 527

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             ++E +KG+LP WL+P Q  +  + +    +Y++EI   LK   + +  D R+E + YK
Sbjct: 528 AFLLEEYKGDLPTWLAPNQVRIIPVNNDYHYDYSKEIMQELKKAGVKVAIDDRDEKLGYK 587

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IRE + KKIP  ++ GDKE   + + +R FGS   ++ S ++    + KE
Sbjct: 588 IREAANKKIPYTLVIGDKEVENKGVNVRTFGSHDQKEESFVEFKENILKE 637


>gi|268608298|ref|ZP_06142025.1| threonyl-tRNA synthetase [Ruminococcus flavefaciens FD-1]
          Length = 646

 Score =  577 bits (1486), Expect = e-162,   Method: Composition-based stats.
 Identities = 249/640 (38%), Positives = 368/640 (57%), Gaps = 13/640 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IKLT PD S++        +++ + I   L K A  V +NG+V DL   +  +   E+ 
Sbjct: 1   MIKLTLPDNSVREIESAQPAAEIVKGIGMGLYKSACCVKVNGEVKDLRTVIDSDCKFEVC 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +         H+ +HI+A+AV+ ++P  ++AIGP I++GFYYDFD E+PF+  EL +I
Sbjct: 61  TFDSLDGKKTFWHTASHILAQAVKRLYPNTKLAIGPAIDNGFYYDFDLEKPFTPAELEKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPA-KENVTLYRQGEWFD 181
           E +M++I+  D    +  LS   A    +   E YKVE+ E      E ++ Y+QGE+ D
Sbjct: 121 EAEMKKIVKEDLALEQFELSPADAIAKLKEMDEPYKVELCEEHADKGEPISFYKQGEFTD 180

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LC GPH+ +T  VK F KL+   GAYWRG+ N  +LSR+Y  A+    +L +YL  +EE+
Sbjct: 181 LCAGPHLMTTAPVKAF-KLLSCTGAYWRGNENNKVLSRVYAIAFPKASQLDEYLKMIEEA 239

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           + RDH+KL +E  LF       G+ +W  +GWK+F  L+ Y R       Y EI+ P + 
Sbjct: 240 KLRDHKKLGKEQALFMFDHTAPGMPYWLPRGWKLFNALLEYWRGVHEDHGYTEISGPVLS 299

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            + LW  SGHWD Y+  MF +       +D   +  KPMNCP  + V+ +  +SY+ELP+
Sbjct: 300 KKELWVTSGHWDHYQDGMFVI----PAEEDNEVYCAKPMNCPNAIKVYMNRQRSYKELPL 355

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           +  +   ++R E SG L+GL RV+ F QDDAH+  T+EQ+ +E   I ++   IY  FG 
Sbjct: 356 KFNQVDVIHRKEKSGELNGLFRVQQFRQDDAHILVTEEQIASEINDIMDIATEIYNTFGL 415

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           E    +LSTRP+  +G   +W+ AE  +K +L+             +  G+GAFYGPK +
Sbjct: 416 EY-KAELSTRPDDYMGDINVWNKAEADLKAILEDKYGPDG----YELNEGDGAFYGPKID 470

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
             +KDAIGR+WQ GTIQ+DF LP  F   Y+ S   +  PVMIHRA+FGS ERFIGI+ E
Sbjct: 471 LKMKDAIGREWQMGTIQLDFQLPLNFKMKYIASDGSEKQPVMIHRAIFGSFERFIGIITE 530

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           NF G  P WLSP+Q  +  I +   +YA+++A LLK +H+  E D+ ++ +  KIR+   
Sbjct: 531 NFAGAFPFWLSPMQVGIVPIRTEHNDYAKKVAALLKKNHIRAEADYTDDNMKNKIRKFKD 590

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
            K P ++I GD EA    + I   G+   + V L   I +
Sbjct: 591 FKDPYVVIIGDSEAENEQVSINIRGNKQLKNVPLDKFIEM 630


>gi|239939977|ref|ZP_04691914.1| threonyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
 gi|239986461|ref|ZP_04707125.1| threonyl-tRNA synthetase [Streptomyces roseosporus NRRL 11379]
          Length = 653

 Score =  577 bits (1486), Expect = e-162,   Method: Composition-based stats.
 Identities = 260/654 (39%), Positives = 377/654 (57%), Gaps = 38/654 (5%)

Query: 13  SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLA 71
           S +   V  TG+  A  +     +  VA  I G++ DLS  +++G S+E +       L 
Sbjct: 7   SEREEHVVTTGTT-AGELFPG-QRTVVAARIGGELKDLSYVLQDGESVEPVEISSEDGLN 64

Query: 72  VIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIA 131
           ++RHS AH+MA+AVQ ++PE ++ IGP ++DGFYYDFD E+PF+ ++L  IEKKMQEI  
Sbjct: 65  ILRHSTAHVMAQAVQELFPEAKLGIGPPVKDGFYYDFDVEKPFTPEDLKAIEKKMQEIQK 124

Query: 132 RDSPFLKQYLSHEKARELFESKKEAYKVEIL------------ESIPAKENVTLYRQGE- 178
           R   F ++ +S E ARE  E   E YK+E++            +       +T+Y   + 
Sbjct: 125 RGQKFSRRVVSDEDARE--ELANEPYKLELIGIKGSASSDDGADVEVGGGELTIYDNLDA 182

Query: 179 ------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELT 232
                 W DLCRGPH+ +T  +  F KLM+ A AYWRG    PML RIYGTAW T+ EL 
Sbjct: 183 KTGELCWKDLCRGPHLPTTRFIPAF-KLMRNAAAYWRGSEKNPMLQRIYGTAWPTKDELK 241

Query: 233 QYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDD 290
            +L FLEE+ KRDHRKL  E+DLF   ++ G G+  +H KG  I + +  Y RR   ++ 
Sbjct: 242 AHLEFLEEAAKRDHRKLGNELDLFSFPDEIGPGLAVFHPKGGVIRRAMEDYSRRRHEEEG 301

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH 350
           YE + +P      L+++SGH D Y   M+     D    D   + LKPMNCP H  +F+ 
Sbjct: 302 YEFVYSPHATKGKLFEKSGHLDWYADGMYPPMQLD----DGVDYYLKPMNCPMHNLIFDA 357

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
             +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDDAH++CTKEQM  E  +    
Sbjct: 358 RGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRSRGFTQDDAHIYCTKEQMAEELDRTLTF 417

Query: 411 IISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL 469
           ++++ +D+G     ++LST+  +  VGSD  W++A   ++ V +      +  +      
Sbjct: 418 VLNLLRDYGLTDFYLELSTKDPEKYVGSDETWEEATATLQQVAE------KQGLPLVPDP 471

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG 529
           G  AFYGPK     KDAIGR WQ  T+Q+DFNLP RF+  Y      K  PVMIHRA+FG
Sbjct: 472 GGAAFYGPKISVQCKDAIGRTWQMSTVQLDFNLPERFDLEYTGPDGSKQRPVMIHRALFG 531

Query: 530 SIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE 589
           SIERF  +++E++ G  P+WL+P+QA+   I  + + Y QE A   +   L ++ D  ++
Sbjct: 532 SIERFFAVLLEHYAGAFPVWLAPVQAVGIPIGDAHIPYLQEFAAKARKQGLRVDVDASSD 591

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +  KIR     K+P +II GD++ +  ++  R    +    + + +AI  + K
Sbjct: 592 RMQKKIRNQQKNKVPFMIIAGDEDMANGAVSFRYRDGSQENGIPVDEAIAKIAK 645


>gi|291440752|ref|ZP_06580142.1| threonyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
 gi|291343647|gb|EFE70603.1| threonyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
          Length = 658

 Score =  577 bits (1486), Expect = e-162,   Method: Composition-based stats.
 Identities = 258/664 (38%), Positives = 387/664 (58%), Gaps = 38/664 (5%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           SD+++     S +   V  TG+  AE  +    +  +A  + G++ DLS  +++G ++E 
Sbjct: 2   SDVRVIIQRDSEREERVVTTGTTAAELFAGE--RSVIAARVAGELRDLSYELQDGETVEG 59

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +       L ++RHS AH+MA+AVQ ++PE ++ IGP ++DGFYYDFD ++PF  D+L  
Sbjct: 60  VEISSEDGLNILRHSTAHVMAQAVQELFPEAKLGIGPPVKDGFYYDFDVDKPFHPDDLKA 119

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL------------ESIPAKE 169
           IEKKMQEI  R   F ++ ++ ++ARE  E   E YK+E++            +      
Sbjct: 120 IEKKMQEIQKRGQRFSRRVVTDDEARE--ELADEPYKLELIGLKGAASHDDGADVEVGAG 177

Query: 170 NVTLYRQGE-------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYG 222
            +T+Y   +       W DLCRGPH+ +T  +  F KLM+ AGAYWRG    PML RIYG
Sbjct: 178 ELTIYDNLDAKTGELCWKDLCRGPHLPTTRNIPAF-KLMRNAGAYWRGSEKNPMLQRIYG 236

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLIS 281
           TAW +++EL  +L FL E+EKRDHRKL  E+DLF I  + GSG+  +H KG  + + +  
Sbjct: 237 TAWPSKEELKAHLEFLAEAEKRDHRKLGHELDLFSIPEQIGSGLAVFHPKGGIVRRVMED 296

Query: 282 YMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
           Y RR   ++ YE + TP      L++ SGH D Y   M+     D    +   + LKPMN
Sbjct: 297 YSRRRHEEEGYEFVYTPHATKGKLFETSGHLDWYADGMYPPMQLD----EGVDYYLKPMN 352

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
           CP H  +F+   +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDDAH++CT+EQM
Sbjct: 353 CPMHNLIFDARGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYCTREQM 412

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDTIKNSS 459
             E  K    ++++ +D+G     ++LST+  +  VG+D  W++A   ++ V +      
Sbjct: 413 SEELDKTLTFVLNLLRDYGLTDFYLELSTKDPEKFVGTDEAWEEATETLRQVAE------ 466

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
           +  +      G  AFYGPK     KDAIGR WQ  TIQ+DFNLP RF+  Y  +   K  
Sbjct: 467 KQGLPLVPDPGGAAFYGPKISVQAKDAIGRTWQMSTIQLDFNLPERFDLEYTAADGSKTR 526

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH 579
           PVMIHRA+FGSIERF  +++E++ G  P WL+P+QA+   I  + VE+ ++ A   +   
Sbjct: 527 PVMIHRALFGSIERFFAVLLEHYAGAFPAWLAPVQAVGIPIGDAHVEHLEKFAAAARKQG 586

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
           L +E D  ++ +  KIR    +K+P ++I GD++ +  ++  R    +    + + +AI 
Sbjct: 587 LRVEVDSSSDRMQKKIRNAQKQKVPFMVIAGDEDMANGAVSFRYRDGSQENGIPVDEAIA 646

Query: 640 ILTK 643
            + K
Sbjct: 647 KIVK 650


>gi|254383626|ref|ZP_04998976.1| threonyl-tRNA synthetase [Streptomyces sp. Mg1]
 gi|194342521|gb|EDX23487.1| threonyl-tRNA synthetase [Streptomyces sp. Mg1]
          Length = 658

 Score =  577 bits (1486), Expect = e-162,   Method: Composition-based stats.
 Identities = 267/664 (40%), Positives = 387/664 (58%), Gaps = 38/664 (5%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           SD+++     S ++  V ATG+  AE  +    +  VA  I G++ DL+  VR+G ++E 
Sbjct: 2   SDVRVIIQRDSERDERVVATGTTAAELFAGE--RTIVAARIAGELKDLAYEVRDGETVEP 59

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +       L ++RHS AH+MA+AVQ ++PE ++ IGP +++GFYYDFD E+PF+ D+L  
Sbjct: 60  VEISSEDGLNILRHSTAHVMAQAVQELFPEAKLGIGPPVQNGFYYDFDVEKPFTPDDLKA 119

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIP------------AKE 169
           IEKKMQEI  R   F ++ ++ E ARE  E   E YK+E++                   
Sbjct: 120 IEKKMQEIQKRGQRFARRVVTDEAARE--ELAGEPYKLELIGIKGSASTDDGANVEVGGG 177

Query: 170 NVTLYRQGE-------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYG 222
            +T+Y   +       W DLCRGPH+ +T  +  F KLM+ A AYWRG    PML RIYG
Sbjct: 178 ELTIYDNLDAKTGELCWKDLCRGPHLPTTRNIPAF-KLMRNAAAYWRGSEKNPMLQRIYG 236

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLIS 281
           TAW ++ EL  +L FL E+EKRDHRKL  E+DLF + ++ GSG+  +H +G  I +T+  
Sbjct: 237 TAWPSKDELKAHLDFLAEAEKRDHRKLGNELDLFSVPDEIGSGLAVFHPRGGIIRRTMED 296

Query: 282 YMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
           Y RR   ++ YE + TP      L+++SGH D Y   M+     D        + LKPMN
Sbjct: 297 YSRRRHEEEGYEFVYTPHATKGALFEKSGHLDWYAEGMYPPMQLDG----GTDYYLKPMN 352

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
           CP H  +F+   +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDDAH++CT+EQM
Sbjct: 353 CPMHNLIFDARGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYCTREQM 412

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDTIKNSS 459
             E  +    ++++ +D+G     ++LST+  +  VGSD  W++A  ++  V +      
Sbjct: 413 AEELDRTLTFVLNLLRDYGLTDFYLELSTKDPEKFVGSDEAWEEATAVLAQVAE------ 466

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
           +  +      G  AFYGPK     KDAIGR WQ  T+Q+DFNLP RFN  Y      +  
Sbjct: 467 KQGLPLVPDPGGAAFYGPKISVQCKDAIGRTWQMSTVQLDFNLPERFNLEYTAPDGSRQR 526

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH 579
           PVMIHRA+FGSIERF  +++E++ G +P WL+P+QA+   I    VEY QE A   K   
Sbjct: 527 PVMIHRALFGSIERFFAVLLEHYAGAMPPWLAPVQAVGIPIGDGHVEYLQEFAAEAKKQG 586

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
           L +E D  ++ +  KIR H   K+P +II GD++ +  ++  R    +    ++  +A+ 
Sbjct: 587 LRVEVDASSDRMQKKIRNHQKLKVPFMIIVGDEDMAAGTVSFRYRDGSQENGIAKDEALA 646

Query: 640 ILTK 643
            L K
Sbjct: 647 KLAK 650


>gi|73981327|ref|XP_860843.1| PREDICTED: similar to threonyl-tRNA synthetase-like 1 isoform 6
           [Canis familiaris]
          Length = 701

 Score =  577 bits (1486), Expect = e-162,   Method: Composition-based stats.
 Identities = 222/645 (34%), Positives = 351/645 (54%), Gaps = 23/645 (3%)

Query: 5   IKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           IK+T P G  +     + T   +A+ +S ++A   VA  +NG++ DL  P+  +  ++ +
Sbjct: 61  IKITLPGGQKVDAVAWNTTPYQLAQQMSSTVADTVVAAQVNGELYDLERPLETDSDLKFL 120

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD--KEQPFSSDELA 120
           T       AV  HS  H++  A + +     +  GP  E GFY+DF   KE+     EL 
Sbjct: 121 TFSSAEGKAVFWHSSTHVLGAAAEQLL-GAVLCRGPSTECGFYHDFFLGKERTVRGSELP 179

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            +E+  QE++A   PF +  +S ++ R+LF+     +K+ ++E        T+Y  G   
Sbjct: 180 ALEQICQELVAAAHPFRRLEVSQDQLRQLFK--DNPFKLRLIEEKVTGPTATVYGCGMLV 237

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+R TGQ+    KL+  + + WR       L R+ G ++ T +EL  +  +  E
Sbjct: 238 DLCRGPHLRHTGQIGGL-KLLTNSSSLWRSSGTPETLQRVSGISFPTVEELRAWEEWKGE 296

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQV 299
           +E RDHR++ +  +LF   E   G  F+  +G +++  L++++R +  +  + E+ TP +
Sbjct: 297 AELRDHRRIGKAQELFFFHELSPGSCFFLPRGTRVYNALVAFIRAEYTRRGFSEVKTPTL 356

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               LW+ SGHW+ Y+ +MF +  + DT       ALKPMNCP H  +F H  +S+RELP
Sbjct: 357 FSAKLWELSGHWEHYQEDMFVLHHSTDT------LALKPMNCPAHCLMFAHRPRSWRELP 410

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +RLA+FG ++R E SGSL GL R+R F QDDAH+FC  +Q+  E     + + S+Y   G
Sbjct: 411 LRLADFGVLHRAEASGSLGGLTRLRCFQQDDAHIFCAPDQLEEEIQGCLDFLRSVYAVLG 470

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F   +  LSTRP   +G   LWD AE +++  L+             +  G+GAFYGPK 
Sbjct: 471 FSFRLA-LSTRPSGFLGESCLWDQAEQVLQRALEEFGEPWD------LKPGDGAFYGPKI 523

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +  L DA+GR  QCGTIQ+DF LP RF+  Y         PV+IHRAV GS+ER +G++ 
Sbjct: 524 DVHLHDALGRPHQCGTIQLDFQLPLRFDLQYKGQAGVLERPVLIHRAVLGSVERMLGVLA 583

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FRNETINYKIREH 598
           E++ G  PLWLSP Q +V  + +   EYA+E    L++  L  + D     T++ ++R  
Sbjct: 584 ESYGGKWPLWLSPFQVVVIPVGAEQEEYAREAQQRLQAAGLVCDLDADSGLTLSRRVRRA 643

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +       + G KE S++++ IR   +    +  L +A+  L +
Sbjct: 644 QLAHYNFQFVVGQKEQSKKTVNIRTRDNRQLGERDLTEAVQRLLE 688


>gi|62185526|ref|YP_220311.1| threonyl-tRNA synthetase [Chlamydophila abortus S26/3]
 gi|73919780|sp|Q5L4T1|SYT_CHLAB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|62148593|emb|CAH64365.1| threonyl-tRNA synthetase [Chlamydophila abortus S26/3]
          Length = 635

 Score =  577 bits (1486), Expect = e-162,   Method: Composition-based stats.
 Identities = 253/632 (40%), Positives = 363/632 (57%), Gaps = 19/632 (3%)

Query: 16  NFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIR 74
             P   T +D A  I  S     V   IN ++ DLS  + EG ++  +T  DP    +  
Sbjct: 12  ELPQGTTAADFASKIKNSHYFAGVV--INDQIKDLSTTLNEGDTLRFVTFTDPEGREIFL 69

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDS 134
           H+ AHI+A+A+  +WP+    IGP+I+ GFYYDF      S D+   IE  M +I     
Sbjct: 70  HTSAHILAQAILRLWPDAIPTIGPVIDQGFYYDFA-NLSISEDDFLMIENMMGQIAEEKF 128

Query: 135 PFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQV 194
              K+  +  K   L E  +  +KVE+++ +P  E++T Y QGE+ DLCRGPH+ STG V
Sbjct: 129 AVQKKTFN-SKHEALEEFARNPFKVELIKELPEGESITAYSQGEFMDLCRGPHLPSTGPV 187

Query: 195 KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMD 254
           K F KL++ + AYWRGD  R  L RIYG A+ T +EL ++L+ L+E++KRDHR L  ++D
Sbjct: 188 KAF-KLLRTSAAYWRGDPQRESLVRIYGVAFPTTKELKEHLHQLKEAKKRDHRVLGMKLD 246

Query: 255 LFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDS 313
           LF   E  +G+ F+H +G  I+  LI Y +R      Y+EI TPQ++ + LW+ SGHW +
Sbjct: 247 LFSQQECSAGMPFFHPRGMIIWDALIGYWKRLHQLAGYKEIQTPQLMSRSLWEVSGHWSN 306

Query: 314 YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP 373
           YR NM+ +K  D        +A+KPMNCPG +  +   L SY++ P+R+AE G V+R E 
Sbjct: 307 YRENMYTLKIED------EDYAIKPMNCPGCMLYYKTRLHSYKQFPLRIAEIGHVHRYEV 360

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
           SG+L GLMRVR F QDDAHVF T EQ+  E L I +L+  +Y  FG E  +   +   + 
Sbjct: 361 SGALSGLMRVRAFHQDDAHVFLTPEQVEEETLNILHLVSELYSTFGLEYHLELSTRPEKA 420

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
            +GSD LW+ A   ++  L              +  G+GAFYGPK +  +KDAI R WQC
Sbjct: 421 TIGSDELWELATAALERALVNSHTP------FIINPGDGAFYGPKIDIHVKDAIQRTWQC 474

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI 553
           GTIQ+D  LP RF   Y N+  EK  PVM+HRA+FGSIERF+GI+IE+FKG  PLWLSP 
Sbjct: 475 GTIQLDMFLPERFELEYTNAQGEKSTPVMLHRALFGSIERFLGILIEHFKGRFPLWLSPE 534

Query: 554 QAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
              V T+       AQ++A   +     +  D  NE+++ KIR     ++  ++  GD+E
Sbjct: 535 HIRVITVADRHQPRAQKLATAWQKLGFVVTVDDSNESVSKKIRNAQNMQVNYMVTLGDRE 594

Query: 614 ASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
             + ++ IR   +     ++    +  L +E 
Sbjct: 595 IEQNTLAIRTRDNRVLNDMTEDKFLNTLLEEK 626


>gi|255071725|ref|XP_002499537.1| predicted protein [Micromonas sp. RCC299]
 gi|226514799|gb|ACO60795.1| predicted protein [Micromonas sp. RCC299]
          Length = 722

 Score =  577 bits (1486), Expect = e-162,   Method: Composition-based stats.
 Identities = 225/633 (35%), Positives = 359/633 (56%), Gaps = 21/633 (3%)

Query: 3   SDIKLTFPDGSIKN-FPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIE 60
             IK+  PDG+IK       +  D+A  I + LA+ ++   ++G+  D+  P+  + S++
Sbjct: 52  EPIKVVMPDGAIKEGIKFVTSPWDIAMGIHKKLAQGSLLAHVDGQDWDMRRPLEGDCSLK 111

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDEL 119
           +   +DP    +  HS AH++ EA++  +    + IGP IE+GFYYD    E+  S+ E 
Sbjct: 112 LFGFDDPEGKELYWHSSAHVLGEALELEY-GADLTIGPSIEEGFYYDCFLGERTLSASET 170

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             I+K+M+ II    PF +  +S  +A E+F+  K  +KVE++ ++P    ++ YR G  
Sbjct: 171 DGIQKRMEAIIKEKQPFQRIVVSRAEALEMFQENK--FKVELISNLPEDATISCYRCGPM 228

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPH+  T  +K        + A+WR D  +  L R+Y   +  ++ + +Y   +E
Sbjct: 229 VDLCRGPHLPDTAWIKTVSVNQ-CSRAHWRADVTKDPLVRVYAVTFPDKKLMAEYKLRIE 287

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E++KRDHR +    +LF       G  F+  +G KI+  L+ ++R K  + +Y+E+ TP 
Sbjct: 288 EAKKRDHRLIGLNQELFFFHTLSPGSCFFLPQGAKIYNKLMEFIREKYWEYEYDEVITPN 347

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V +  LW+ SGH   Y+ NMF+         +   F LKPMNCPGH  +F +  +S+REL
Sbjct: 348 VYNFDLWKTSGHAAHYKENMFSFDV------EKAEFGLKPMNCPGHCVMFGNRKRSFREL 401

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLA+FG ++RNE SG+LHGL RVR F QDDAH+FC ++QM  E      ++  IY+ F
Sbjct: 402 PMRLADFGVLHRNEFSGALHGLTRVRRFQQDDAHIFCRQDQMEKELAAFVKMLDEIYEVF 461

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           G    M KLSTRPE  +G    W+ AE  ++  L+      +      +  G+GAFYGPK
Sbjct: 462 GLTYEM-KLSTRPEGYLGELETWNKAEAALEAALNGTGKEWK------LNPGDGAFYGPK 514

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +  + DA+ R +QC T+Q+DF LP RFN  YV+  +E   P++IHRA+ GS+ER   I+
Sbjct: 515 IDITVFDALKRRFQCATVQLDFQLPIRFNLSYVSEANEPERPIIIHRAILGSVERMFAIL 574

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
            E+F G  P WLSP Q ++  I+  + +YA E+ ++L+      E D  +  +  K+RE 
Sbjct: 575 TEHFAGKWPFWLSPRQVMIVPISEQSRDYAHEVRSVLRKEGFYCEVDDSDRKMQKKVREA 634

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
            +++   I++ G+ E + R++ IR   +    +
Sbjct: 635 QLEQWNYILVVGEGEKTNRTVNIRTRDNVVHGE 667


>gi|316965047|gb|EFV49888.1| threonyl-tRNA synthetase, cytoplasmic [Trichinella spiralis]
          Length = 714

 Score =  576 bits (1485), Expect = e-162,   Method: Composition-based stats.
 Identities = 223/630 (35%), Positives = 350/630 (55%), Gaps = 24/630 (3%)

Query: 2   PSDIKLTFPDGSIKN-FPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSI 59
              I +T PDG          +  D+   +  ++  + +   ++G + DL  P+ +  ++
Sbjct: 55  SEPITVTLPDGKEVEAMAWRTSPLDIMTKL--NMGGRPIVSKVDGVLWDLERPLEKSCNL 112

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF-DKEQPFSSDE 118
           + +  +D     V  HS AH++ EA + ++    +  GP IE+GFYYD    ++  ++++
Sbjct: 113 QFLLFDDDEGKQVFWHSTAHVLGEAAERLF-GCCLCYGPPIENGFYYDMFMDDRTVTAED 171

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           + ++EK M+  I    PF +  L  E+  E+F+     +K+ ILE+       T YR G 
Sbjct: 172 MDKLEKIMKAAIDGKQPFERLELKKEELMEMFKY--NPFKLRILENKVKTPTTTAYRCGP 229

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLCRGPHVR TG +  F K+ K +  +W GDS+   L R+YG ++   ++L  +    
Sbjct: 230 LIDLCRGPHVRHTGLLNSF-KITKNSSTFWEGDSSMESLQRVYGVSFPNSKQLKLWEKMR 288

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
           EE+  RDHRKL R+ +LF   E   G  F+  +G  I+ TL+ ++R++ +   + E+ TP
Sbjct: 289 EEAASRDHRKLGRQQELFIFHELSPGSAFFFPRGAYIYNTLVEFLRKQYRKRGFREVITP 348

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  LW+ SGHW  Y  NMF ++       +   F LKPMNCPGH  +F  GL++Y+E
Sbjct: 349 NIYNSRLWETSGHWQHYAKNMFKIEI------EKELFGLKPMNCPGHCLMFATGLRTYKE 402

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R A+FG ++RNE SG+L GL RVR F QDDAH+FC ++Q+ +E     + +  +Y+ 
Sbjct: 403 LPLRFADFGVLHRNELSGALSGLTRVRRFQQDDAHIFCRQDQIASEIEGCLDFLRFVYET 462

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
            GF  + + LSTRP+  +G    WD+AE  ++  L+  K      +   +  G+GAFYGP
Sbjct: 463 LGF-SMKLYLSTRPDDFMGDVKTWDEAEAQLQCALEKFK------LPWTLNAGDGAFYGP 515

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K + I+ DA+ R  QC TIQ+DF LP RF+  YV+ +  K  PV+IHRAV GSIER I +
Sbjct: 516 KIDIIVLDAMQRQHQCATIQLDFQLPVRFDLHYVDENHVKQRPVIIHRAVLGSIERMIAV 575

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FRNETINYKIR 596
           + ENF G  P WLSP QA+V  +     +YA ++   +       + D   ++T+  KIR
Sbjct: 576 LTENFAGKWPFWLSPRQAMVIPVHPEFDDYALQVQQKIFDAGFECDVDVDASDTMKKKIR 635

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGS 626
              + K   I++ G KE    S+ IR   +
Sbjct: 636 NAQLGKWNFILVVGAKEKENSSVNIRTRDN 665


>gi|325263251|ref|ZP_08129986.1| threonine--tRNA ligase [Clostridium sp. D5]
 gi|324031644|gb|EGB92924.1| threonine--tRNA ligase [Clostridium sp. D5]
          Length = 653

 Score =  576 bits (1485), Expect = e-162,   Method: Composition-based stats.
 Identities = 240/657 (36%), Positives = 368/657 (56%), Gaps = 20/657 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           +K+T  DGS+K +    T  D+A  IS  LA+ A A  I+G+  DL   +  + ++ I+T
Sbjct: 1   MKITLKDGSVKEYAESKTIIDIAFDISEGLARAACAGEIDGETADLRTLIEKDCTLNILT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
             D   L V+RH+C+H++AEAV++++P+ ++AIGP I+ G+YYDFD   PFS ++L +IE
Sbjct: 61  ARDEAGLRVVRHTCSHVLAEAVKNLFPDAKLAIGPAIDTGYYYDFDA-APFSREDLDKIE 119

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M++II + +   K  L  E+A    E K E YKVE++  +P    ++ YRQG++ DLC
Sbjct: 120 KEMKKIIKKGAKLEKFTLPREEAIAFMEEKGEPYKVELIRDLPEDSVISFYRQGDFVDLC 179

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+ ST  +K F KL   +GAYWRGDSN+ ML RIYG+A+ T+ EL +YL +LEE +K
Sbjct: 180 AGPHLMSTKGIKAF-KLTSSSGAYWRGDSNKAMLQRIYGSAFATKDELNEYLQYLEEVKK 238

Query: 244 RDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEINTPQVL 300
           RDH KL REM+LF      G G+     KG KI QTL  ++  +  +   Y    TP + 
Sbjct: 239 RDHNKLGREMELFTTVDVIGQGLPLLMPKGAKIIQTLQRWIEDEEDNNWGYIRTKTPLMA 298

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
              L+Q SGHWD Y+  MF +    D   +   FAL+PM CP    V+    KSYR+LP+
Sbjct: 299 KSDLYQISGHWDHYKDGMFVL---GDEETNKEVFALRPMTCPFQYYVYKASQKSYRDLPL 355

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R +E  +++RNE SG +HGL RVR FT  + H+    +QM  E      L        G 
Sbjct: 356 RYSETSTLFRNEDSGEMHGLTRVRQFTISEGHLIVRPDQMVEEFKGCLALAKKCLTTLGL 415

Query: 421 EKIMVKL-----STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           +  +            EK +G   +W++ E  ++ +L  ++      +      GE AFY
Sbjct: 416 QDDVTYHLSKWDPDNTEKYIGDAEVWNETEGHIRNILTELE------VPFVEDAGEAAFY 469

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +   K+  G++    TIQ D  L  +F+ +Y++ + +K  P +IHR   G  ER +
Sbjct: 470 GPKVDINAKNVYGKEDTMITIQWDALLAEQFDMYYIDQNGDKVRPYIIHRTSIGCYERTL 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
             +IE + G  P WL P Q  +  ++   ++YA ++ N +K++++    D R+E I YKI
Sbjct: 530 AWLIEKYAGMFPTWLCPEQVRILPVSDKYLDYADKVENEMKANNILCTVDSRSEKIGYKI 589

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           RE  + KIP ++I G+KE +E ++ +R           L   I  + +E    + +K
Sbjct: 590 REARLAKIPYMLIVGEKEEAEGTVSVRSRFLGDEGAKGLQGFIDDVCREIRTKEIRK 646


>gi|330719257|ref|ZP_08313857.1| threonyl-tRNA synthetase [Leuconostoc fallax KCTC 3537]
          Length = 654

 Score =  576 bits (1485), Expect = e-162,   Method: Composition-based stats.
 Identities = 231/655 (35%), Positives = 379/655 (57%), Gaps = 26/655 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           S+++L FPDG+IK F       DVAESIS+SLAKK+V+  +NG    + D +   G  ++
Sbjct: 2   SELELVFPDGAIKTFAAGTKPLDVAESISKSLAKKSVSAKLNGAYVGMHDVIPASGQFQL 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSI--WPEVQVAIGPIIEDGFYYDFDKE--QPFSSD 117
           IT  D  +L ++RHS +H++A+A++ I  +  +   +GP IE+GFYYD D       S +
Sbjct: 62  ITTSDDEALDLLRHSASHLLAQALKRIPKFSNIHFGVGPFIENGFYYDTDNGAGNQVSVE 121

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           + A+IE  M +I+  D P + + ++ E+A  +F+   + YKVE++  +PA+E +T+  QG
Sbjct: 122 DFAEIEAMMHKIVKEDLPIVSREITREEALSMFK--DDPYKVELINDLPAEEKITIAVQG 179

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           +  +L +G  V ST  +K F KL+ VAGAYWRGDS+  M+ RIYGTA+    ++   L  
Sbjct: 180 DHIELDKGGLVPSTSWIKHF-KLVSVAGAYWRGDSSNHMMQRIYGTAFWKAADVEAELQR 238

Query: 238 LEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEIN 295
            +E+++RDHR + R++DLF  +++ GSG+  W   G  I + +  Y+  +++ +DY  + 
Sbjct: 239 RQEAKERDHRNIGRDLDLFFTSQEVGSGLPVWLPNGATIRRQVERYIVDKELSNDYLHVY 298

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP + + +L++ SGHW+ YR +MF          D     L+PMNCP H+ ++ H  +SY
Sbjct: 299 TPILSNLNLYKTSGHWEHYREDMFPPMDMG----DGEFLELRPMNCPSHIMIYKHKPRSY 354

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP+R+AE G ++R E SG+L GL RVR  T +D H F   E++  E   I  +++ +Y
Sbjct: 355 RELPMRIAELGMMHRYEKSGALTGLSRVREMTLNDGHTFVEPEKLEEEFKSILKMMMEVY 414

Query: 416 KDFGFEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
           +DF       +LS R      K    D +W+ ++  +K  +D +       ++     GE
Sbjct: 415 EDFNITDYRFRLSYRDPKNTAKYFDDDEMWEKSQKQLKTAMDDLG------LDYFEAEGE 468

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK-CHPVMIHRAVFGS 530
            AFYGPK +   K A+G +    TIQ+DF LP RF+  Y+    +    PVM+HR + G+
Sbjct: 469 AAFYGPKLDVQTKTALGGEETLSTIQLDFLLPERFDLSYIGEDGKDNHRPVMLHRGIVGT 528

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNE 589
           +ERF   +IE +KG  P WLSP+Q  +  +   +  +YA+ I   L+   L    + ++ 
Sbjct: 529 MERFTAYLIEMYKGAFPTWLSPLQVQIIPVNLGAHGDYARRIQQQLQVAGLRANVETKDA 588

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            + Y IRE   KK+P  ++ GD E ++ ++ +R++GS  T+ +S+     ++  +
Sbjct: 589 KMGYLIREAQTKKVPYTLVLGDNEVADETVTVRQYGSEKTETISIAAFEKLILAD 643


>gi|308805817|ref|XP_003080220.1| putative threonyl-tRNA synthetase (ISS) [Ostreococcus tauri]
 gi|116058680|emb|CAL54387.1| putative threonyl-tRNA synthetase (ISS) [Ostreococcus tauri]
          Length = 673

 Score =  576 bits (1485), Expect = e-162,   Method: Composition-based stats.
 Identities = 223/649 (34%), Positives = 356/649 (54%), Gaps = 42/649 (6%)

Query: 2   PSDIKLTFPDGSIKN-FPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
              I +T PDG +K       T  DVA SI + LA+ A+   ++G+  D+  P+  + ++
Sbjct: 49  SEPIAVTLPDGGVKAGVRFATTPYDVAMSIHKKLAQNALVAKVDGEFWDMRRPLEGDCAL 108

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDE 118
           ++ T +D        HS AH++ EA++  +    + IGP IE+GFYYD    E+  + D+
Sbjct: 109 QMFTFDDAEGKECYWHSSAHVLGEALELEY-GADLTIGPAIEEGFYYDCFLGERTLNPDD 167

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
            A I+ +M++II     F +  +S  +A E+FE     +K+E++  +P    ++ YR G 
Sbjct: 168 TATIKARMEKIIGEKQEFQRIVVSRAEALEMFEE--NKFKLELIGGLPEDATISCYRCGP 225

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLCRGPH+  TG +K    + + + A+WR D  +  L R+Y   + T + + +Y+  +
Sbjct: 226 MVDLCRGPHLPDTGHLK-AVAVTQCSRAHWRADVTKDPLVRVYAVTFPTDKLMKEYVTRI 284

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE++KRDHR +    +LF   +   G  F+ + G +I+ +L+ Y++ K  + +Y+E+ TP
Sbjct: 285 EEAKKRDHRTIGLNQELFFFHQLSPGSCFFQKYGARIYNSLVGYIKEKYWEYEYDEVITP 344

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +                                  F LKPMNCPGH  +F H  +S+RE
Sbjct: 345 TL--------------------------HLTCRKEEFGLKPMNCPGHCVMFAHRHRSFRE 378

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+A+FG ++RNE SG+L GL RVR F QDDAH+FC ++QM  E L     +  +Y  
Sbjct: 379 LPMRVADFGVLHRNEFSGALSGLTRVRRFQQDDAHIFCREDQMEQELLGFLRFLDDVYTV 438

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FG E  M KLSTRPE  +G   +WD AE  +   L+          +  +  G+GAFYGP
Sbjct: 439 FGLEYEM-KLSTRPEGYLGELEVWDKAEAALTAALNRSGR------DWKLNPGDGAFYGP 491

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  + DA+ R +QC T+Q+DF LP RF+  YV+ ++E   P++IHRA+ GS+ER  GI
Sbjct: 492 KIDITVFDALKRRFQCATVQLDFQLPIRFDLSYVDENNEPTRPIIIHRAILGSVERMFGI 551

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAV-EYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           + E+F G  P WLSP Q ++  I+ SA  EY  E+  +L+     +E D  +  +  K+R
Sbjct: 552 LTEHFAGKWPFWLSPKQVMIVPISDSASGEYCMEVKRMLRKEGFHVEVDNSDRKMQKKVR 611

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           E  +++   I++CG+ E   R++ +R   +    +  + D I +L KE 
Sbjct: 612 EAQLEQFNYILVCGESEKVNRTVNVRTRDNKVHGEHKVEDLITVLNKER 660


>gi|323450323|gb|EGB06205.1| hypothetical protein AURANDRAFT_29703 [Aureococcus anophagefferens]
          Length = 750

 Score =  576 bits (1484), Expect = e-162,   Method: Composition-based stats.
 Identities = 210/651 (32%), Positives = 344/651 (52%), Gaps = 30/651 (4%)

Query: 5   IKLTFPDGSIK-NFPVHATGSDVAESISRSLAKKAVAVA----INGKVCDLSDPVR-EGS 58
           I++T PDG++K       +  D+A  IS+ LA +         +   + DL  P+  +  
Sbjct: 85  IEITLPDGTVKPGVAHETSPLDIALGISKQLAGRVCVARAGDVVKPVLWDLPRPLEGDCR 144

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSD 117
           +E++  E P    V  HS AH++  A++  +   +++IGP +E GFYYD     +  S  
Sbjct: 145 LELLDFESPEGKMVFWHSAAHLLGAALEQKY-GAKLSIGPPVEGGFYYDAYIGNETISDK 203

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES-IPAKENVTLYRQ 176
           E   I+ ++ +I+   + F +  L+  +  ++F      +K  I+++ +P     T YR 
Sbjct: 204 EFKDIQARVAKIVNAKAKFERLALTKAELLDMFAY--NPFKSAIIQNKVPDGAMTTAYRS 261

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           G   DLC GP V   G+VK F ++++ + AYW G +    L R+YG A+  ++ LT++  
Sbjct: 262 GPIIDLCMGPQVPDAGRVKAF-EVLRASSAYWLGKTENDTLQRVYGVAFPDKKGLTKHKA 320

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEIN 295
            L E+ KRDHRK+     LF   +   G  F+   G +I+  LI++++ +    +Y E+ 
Sbjct: 321 MLAEAAKRDHRKVGGAQKLFFFDQLSPGSAFFEPHGARIYNGLIAFIKDQYWLREYTEVV 380

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP V +  LW  SGH   Y+ +MF          +   F +KPMNCPGH  +F H ++S+
Sbjct: 381 TPNVYNFDLWHTSGHALHYKDDMFCFDV------EGAEFGMKPMNCPGHCLMFKHDVRSW 434

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           R+LP+R A+FG ++RNE SG+L GL RVR F QDD H+FC ++Q+  E       +  +Y
Sbjct: 435 RDLPMRYADFGVLHRNELSGALSGLTRVRRFQQDDGHIFCREDQVEEEVRGALEFMKHVY 494

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
             FG    + +LSTRP+K +G  A+WD AE  +   +D        R+N     G+GAFY
Sbjct: 495 DVFGMGYRL-ELSTRPKKALGDKAVWDRAEAALASAMDAFAGKGGWRVN----PGDGAFY 549

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH------SEKCHPVMIHRAVFG 529
           GPK +  + DA+ R  QC TIQ+DF LP RF+  Y               P++IHRA+ G
Sbjct: 550 GPKIDIKVTDALERVHQCATIQLDFQLPIRFDLKYRVGDTSGEEGGAVTRPIIIHRAMLG 609

Query: 530 SIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE 589
           S+ER + ++ E++ G  P W+SP Q  V  +  +  +YA+ +   +++    ++ D    
Sbjct: 610 SVERMMAVLTEHWGGKWPFWISPRQVCVIPVGPTNFDYARAVRKTIRAARFFVDVDDSGN 669

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
           T+  K+R   + +   I++ GD E S+ ++ +R   +T    V L D +  
Sbjct: 670 TLPKKVRNAQLAQYNFILVVGDNEVSDGTVTVRTRANTVEGTVPLADFVAR 720


>gi|301066747|ref|YP_003788770.1| threonyl-tRNA synthetase [Lactobacillus casei str. Zhang]
 gi|300439154|gb|ADK18920.1| Threonyl-tRNA synthetase [Lactobacillus casei str. Zhang]
          Length = 657

 Score =  576 bits (1484), Expect = e-162,   Method: Composition-based stats.
 Identities = 236/647 (36%), Positives = 367/647 (56%), Gaps = 24/647 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +TFPDG++K FP   T   + E IS SLAKKAVA  ++G +    +P+   G ++I+T +
Sbjct: 5   ITFPDGNVKQFPDGTTVKAITEGISNSLAKKAVAGKLDGDLIAYDEPIAHSGQLQIMTKD 64

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQIEK 124
           D   L V+R + A ++A A++ ++P++    G   EDGFYYD D+ +   S D+L  ++K
Sbjct: 65  DAEGLTVLRQTAAFVLAAALKDLYPDIHFGQGQATEDGFYYDTDRADGQVSVDDLPAVQK 124

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
           KM+ II  ++      LS  +A      K + +K +++E   A + +  Y+ G++ D   
Sbjct: 125 KMEAIIKENAALEPVVLSRAEA--FQAFKNDPFKKQLVE--AAGDPIKGYKLGDFVDFEE 180

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
              + S  +  K  KL+ VAGAYW+G S+ PML RIYGTA+ +++ L       +E+ + 
Sbjct: 181 KVLLPS-LKDLKHLKLLSVAGAYWQGKSSNPMLQRIYGTAYWSEKGLEDDAKRRQEAAEH 239

Query: 245 DHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQ 302
           DHR + R++DLF +      G+ +W   G  I + +  Y+  ++I D YE + TP + + 
Sbjct: 240 DHRVIGRDLDLFFVDPKVGAGLPYWMPNGATIRRVIERYIIDKEIADGYEHVYTPVLANL 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            L++ SGHWD YR +MF          D     L+PMNCP H+ ++NH ++SYRELP+R+
Sbjct: 300 DLYKTSGHWDHYREDMFPPMDMG----DGEMLELRPMNCPSHIQIYNHHIRSYRELPLRI 355

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AE G ++R E SG+L GL RVR  T +D H F   +Q+  E  KI  LI+ +Y+DF    
Sbjct: 356 AELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQVQEEFKKILRLIMDVYEDFNITD 415

Query: 423 IMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
              +LS R  K        D +W  +++++KG +D +K      ++     GE AFYGPK
Sbjct: 416 YSFRLSYRDPKNTEKYFDDDEMWTRSQSMLKGAMDDLK------LDYYEAEGEAAFYGPK 469

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +   K A+G D    TIQ+DF LP RFN  YV    E+  PVMIHR + G++ERFI  +
Sbjct: 470 LDIQTKTALGNDETMSTIQLDFMLPERFNLTYVGKDGEEHRPVMIHRGIVGTMERFIAYL 529

Query: 539 IENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
            E +KG  P WL+P QA++  + +   ++Y   I   + +  L ++ D RNE + YKIRE
Sbjct: 530 TEIYKGAFPTWLAPTQAVLIPVNNDLHLDYVNRIKKQMLAAGLRVKVDDRNEKMGYKIRE 589

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
              KKIP  ++ GDKE ++ ++ +RR+G   T++ +    I  L  E
Sbjct: 590 AQTKKIPYTVVVGDKELNDAAVSVRRYGDEHTEEEAGNMFIDALVAE 636


>gi|325963430|ref|YP_004241336.1| Ser-tRNA hydrolase; threonyl-tRNA synthetase [Arthrobacter
           phenanthrenivorans Sphe3]
 gi|323469517|gb|ADX73202.1| Ser-tRNA hydrolase; threonyl-tRNA synthetase [Arthrobacter
           phenanthrenivorans Sphe3]
          Length = 669

 Score =  576 bits (1484), Expect = e-162,   Method: Composition-based stats.
 Identities = 251/675 (37%), Positives = 375/675 (55%), Gaps = 45/675 (6%)

Query: 1   MPSDIKLTFP-DGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS- 58
           M    ++T   DG         TG+++         +  V   +NG++ DL   + EG+ 
Sbjct: 1   MSDAQQITLLVDGEETKVTTGTTGAELFFE-----RRDVVVARVNGELKDLDQELPEGAD 55

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           +E +T + P  L V+RHS AH+MA+AVQ + P+ ++ IGP I DGFY+DFD  +PF+ ++
Sbjct: 56  VEGVTIDSPDGLNVLRHSTAHVMAQAVQQLRPDAKLGIGPYITDGFYFDFDVAEPFTPED 115

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK---------- 168
           L  +EK M +I+ ++  F+++ +S E+ARE  +   E YK+E+L                
Sbjct: 116 LKTLEKMMLKIVNQNQKFVRRVVSEEEAREAMK--NEPYKLELLGKKNEAAEAGEGVNVE 173

Query: 169 ---ENVTLYRQGE-------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLS 218
               ++T+Y   E       W DLCRGPH+ +T  +   F L + + AYW G+     L 
Sbjct: 174 VGAGDITIYDNVERKEGTTVWCDLCRGPHLPNTKLISNAFALTRSSSAYWLGNQKNQQLQ 233

Query: 219 RIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQ 277
           RIYGTAW T+  L  Y   + E+E+RDHRKL  E+DLF   ++ GSG+  +H KG  I +
Sbjct: 234 RIYGTAWPTKDALKAYQERIAEAERRDHRKLGSELDLFSFPDELGSGLPVFHPKGGIIRK 293

Query: 278 TLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD------ 330
            +  Y R R ++  YE + TP +   HL++ SGH D YR  MF     D  + +      
Sbjct: 294 EMEDYSRQRHVEAGYEFVYTPHITKGHLYEVSGHLDWYRDGMFPAMHVDAELNEDGTVRK 353

Query: 331 -LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
             + + LKPMNCP H  +F    +SYRELP+RL EFGSVYR E SG +HGL RVRG TQD
Sbjct: 354 PGQDYYLKPMNCPMHNLIFRSRGRSYRELPLRLFEFGSVYRYEKSGVVHGLTRVRGMTQD 413

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIM 448
           DAH++CT+EQM +E  K  N ++ + KD+G     ++LST+  +  VG DA W++A   +
Sbjct: 414 DAHIYCTREQMKDELTKTLNFVLGLLKDYGLNDFYLELSTKDPEKYVGEDAAWEEATRTL 473

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
             V        +  +      G  AFYGPK     KDA+GR WQ  TIQ+DFNLP RF  
Sbjct: 474 AEVAQ------ESGLELVPDPGGAAFYGPKISVQAKDALGRTWQMSTIQLDFNLPERFEL 527

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYA 568
            +  +   +  PVMIHRA+FGSIERF+G++ E++ G  P WL+P+Q +   +  +  EY 
Sbjct: 528 EFQAADGTRQRPVMIHRALFGSIERFMGVLTEHYAGAFPAWLAPVQVVGIPVAETFNEYM 587

Query: 569 QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
            ++ + LK+  +  E D  ++    KIR  S  KIP ++I G  +A   ++  R    + 
Sbjct: 588 FDVVDQLKAAGIRAEVDTSSDRFPKKIRTASKDKIPFVLIAGGDDAEAGAVSFRFRDGSQ 647

Query: 629 TQKVSLLDAIPILTK 643
              V + +A+  +T+
Sbjct: 648 DNGVPVAEAVKRITE 662


>gi|282890339|ref|ZP_06298867.1| hypothetical protein pah_c016o048 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281499721|gb|EFB42012.1| hypothetical protein pah_c016o048 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 641

 Score =  576 bits (1484), Expect = e-162,   Method: Composition-based stats.
 Identities = 239/635 (37%), Positives = 371/635 (58%), Gaps = 17/635 (2%)

Query: 13  SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLA 71
           S    P  +T  D+A+ +  +   +AV V +NGK  DL+ P+++G +I   + +DP+   
Sbjct: 11  SELELPEESTAKDLADKLHLNGPSQAVGVNVNGKAVDLTYPLKDGDAITFWSFDDPQGKE 70

Query: 72  VIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIA 131
           V  H+ AH++A+A+  IWP+ Q  IGP IE+GFYYDF      S  +  +IE++M+ II 
Sbjct: 71  VFWHTSAHVLAQAILRIWPDAQPTIGPPIENGFYYDF-GNLTISDQDFEKIEEQMRLIIE 129

Query: 132 RDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRST 191
            +    ++  ++++   L       +K E++ S P    ++ YRQGE+FDLCRGPH+ + 
Sbjct: 130 ENYLSKRESFANKE-EALQAFAHNPFKQELIRSFPEDAELSGYRQGEFFDLCRGPHLYNL 188

Query: 192 GQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAR 251
           G++K   K++K +GAYWRG+    ML+R+Y   +  ++ L  YL  +EE++KRDH+ L  
Sbjct: 189 GKIK-ALKVLKTSGAYWRGNHENEMLTRVYAITFPDRKMLKDYLTSVEEAKKRDHKVLGA 247

Query: 252 EMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGH 310
           ++DLF + E+  G+ F H KG  I+  L++Y+R+ + D +Y EI TP ++ + LW+ SGH
Sbjct: 248 KLDLFSLKEEAPGMPFIHPKGTIIWNELLAYLRQCLDDKNYIEIKTPTMMTRDLWELSGH 307

Query: 311 WDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYR 370
           W +YR NMF  +       + R FA+KPMNCPG +  +   + SYRELP+R+AE G+V+R
Sbjct: 308 WSNYRQNMFTSEI------ENRDFAIKPMNCPGCMLYYRGQIHSYRELPLRVAEIGNVHR 361

Query: 371 NEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR 430
            EPSGSL GL RVR F QDDAH+F     + +E L + NL   IY  FG    +   +  
Sbjct: 362 FEPSGSLSGLFRVRSFHQDDAHIFMKPSDIRSEILNVLNLAHEIYSTFGLTYRLELSTRP 421

Query: 431 PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRD 490
            +  +G+D  W+ A   +K  LD             +  G+GAFYGPK ++ ++DAI R 
Sbjct: 422 EKNTIGTDKEWEIATEGLKNALDETGRP------YRINEGDGAFYGPKIDFHIQDAINRT 475

Query: 491 WQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL 550
           WQCGTIQ+D  LP +F   Y      +  PVMIHRA+FGSIERF GI+IE+F G  PLW+
Sbjct: 476 WQCGTIQLDMALPEKFELEYTAEDGSRQRPVMIHRAIFGSIERFFGILIEHFSGRFPLWI 535

Query: 551 SPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           SP+Q  +  +    VEYA+ +    K      + D  NE+++ K+R   + +I  ++  G
Sbjct: 536 SPLQVRLIPVADRHVEYARTLRKQFKQAGFHCDIDESNESVSKKVRNAQLSQINYMLTVG 595

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           D+E    ++ +R   +    ++   + I  + +E 
Sbjct: 596 DQEVQNHTVNLRTRENVVLGEIKPEELIASMLEEK 630


>gi|220912797|ref|YP_002488106.1| threonyl-tRNA synthetase [Arthrobacter chlorophenolicus A6]
 gi|254783507|sp|B8H9E8|SYT_ARTCA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|219859675|gb|ACL40017.1| threonyl-tRNA synthetase [Arthrobacter chlorophenolicus A6]
          Length = 669

 Score =  575 bits (1483), Expect = e-162,   Method: Composition-based stats.
 Identities = 250/675 (37%), Positives = 374/675 (55%), Gaps = 45/675 (6%)

Query: 1   MPSDIKLTFP-DGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS- 58
           M    ++T   DG         TG+++         +  V   +NG++ DL   + EG+ 
Sbjct: 1   MSDAQQITLLVDGEETKVTTGTTGAELFFE-----RRDVVVARVNGELKDLDQELPEGAE 55

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           +E +T E P  L V+RHS AH+MA+AVQ + P+ ++ IGP I DGFY+DFD  +PF+ ++
Sbjct: 56  VEGVTIESPDGLNVLRHSTAHVMAQAVQQLRPDAKLGIGPYITDGFYFDFDVAEPFTPED 115

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK---------- 168
           L  +EK MQ+II ++  F+++ +S ++ARE  +   E YK+E+L                
Sbjct: 116 LKTLEKMMQKIINQNQKFVRRVVSEDEAREAMK--NEPYKLELLGKKNEAAEAGEGVNVE 173

Query: 169 ---ENVTLYRQGE-------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLS 218
               ++T+Y   E       W DLCRGPH+ +T  +   F L + + AYW G+     L 
Sbjct: 174 VGAGDITIYDNVERKEGTTVWCDLCRGPHLPNTKLISNAFALTRSSSAYWLGNQKNQQLQ 233

Query: 219 RIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQ 277
           RIYGTAW T+  L  Y   + E+E+RDHRKL  E+DLF   ++ GSG+  +H KG  I +
Sbjct: 234 RIYGTAWPTKDALKAYQERIAEAERRDHRKLGSELDLFSFPDELGSGLPVFHPKGGIIRK 293

Query: 278 TLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD------ 330
            +  Y R R ++  YE + TP +   HL++ SGH D Y+  MF     D  + +      
Sbjct: 294 EMEDYSRQRHVEAGYEFVYTPHITKGHLYEVSGHLDWYKEGMFPAMHVDAELNEDGTVRK 353

Query: 331 -LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
             + + LKPMNCP H  +F    +SYRELP+RL EFGSVYR E SG +HGL RVRG TQD
Sbjct: 354 PGQDYYLKPMNCPMHNLIFRSRGRSYRELPLRLFEFGSVYRYEKSGVVHGLTRVRGMTQD 413

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIM 448
           DAH++CT+EQM  E  K    ++ + KD+G     ++LST+  +  VG DA W++A   +
Sbjct: 414 DAHIYCTREQMKEELTKTLTFVLDLLKDYGLNDFYLELSTKDPEKYVGEDAAWEEATRTL 473

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
             V        +  +      G  AFYGPK     KDA+GR WQ  TIQ+DFNLP RF  
Sbjct: 474 AEVAQ------ESGLELVPDPGGAAFYGPKISVQAKDALGRTWQMSTIQLDFNLPERFEL 527

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYA 568
            +  +   +  PVMIHRA+FGS+ERF+G++ E++ G  P WL+P+Q +   +  +  EY 
Sbjct: 528 EFQAADGSRQRPVMIHRALFGSVERFMGVLTEHYAGAFPAWLAPVQVVGIPVAETFNEYM 587

Query: 569 QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
            ++ + LK+  +  E D  ++    KIR  S  KIP ++I G  +A   ++  R    + 
Sbjct: 588 FDVVDQLKAAGIRAEVDTSSDRFPKKIRTASKDKIPFVLIAGGDDAEAGAVSFRFRDGSQ 647

Query: 629 TQKVSLLDAIPILTK 643
              V + +A+  +T+
Sbjct: 648 DNGVPVAEAVKRITE 662


>gi|315186787|gb|EFU20545.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Spirochaeta
           thermophila DSM 6578]
          Length = 578

 Score =  575 bits (1483), Expect = e-162,   Method: Composition-based stats.
 Identities = 258/577 (44%), Positives = 370/577 (64%), Gaps = 16/577 (2%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           +  IRHS AHIMA+AV  ++PE + AIGP I+ GFYYDFD  +  + ++L +IE+ M++ 
Sbjct: 6   IERIRHSAAHIMADAVLRLFPEAKFAIGPAIDTGFYYDFDLPRSLTPEDLEKIEELMRKT 65

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
           I  D PF ++ +S E+ARELF+   + YK+EILE IP  E V++YR G + DLCRGPHV 
Sbjct: 66  IEEDLPFKREVISREEARELFK--DQPYKLEILEEIPEGEEVSIYRHGTFVDLCRGPHVE 123

Query: 190 STGQVKK-FFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRK 248
            TGQ+     KL+ +AGAYWRGD  RPML RIYGTAW+T +EL QYL  L+E EKRDHR+
Sbjct: 124 RTGQINPDAVKLLSIAGAYWRGDERRPMLQRIYGTAWHTPKELRQYLEHLKEVEKRDHRR 183

Query: 249 LAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQ 306
           L +E+DLF + E+ G G+I+WH KG +I   + ++ R   +   YE + TP +    LW+
Sbjct: 184 LGKELDLFSVHEEAGPGLIYWHPKGARIRLEIENFWREQHLARGYEVLYTPHIGKAWLWE 243

Query: 307 QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFG 366
            SGH   Y+ NM+A         D   + +KPMNCP H+ ++   L+SYRELP+R AE G
Sbjct: 244 TSGHLSFYKENMYAPMEV-----DKSDYYIKPMNCPFHIMIYKTRLRSYRELPLRWAELG 298

Query: 367 SVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK 426
           +VYR E SG LHGL+RVRGFTQDDAH+FCT EQ+ +E L+     + ++K FGF  +   
Sbjct: 299 TVYRYERSGVLHGLLRVRGFTQDDAHIFCTPEQIEDEILETLRFSLFMWKTFGFSDVKAY 358

Query: 427 LSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDA 486
           LSTRP+K VG    W+ A   ++  ++      ++ ++  V  G GAFYGPK +  ++DA
Sbjct: 359 LSTRPDKSVGEPERWEQATESLRKAIE------REGLDYEVDEGGGAFYGPKIDIKVRDA 412

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNL 546
           +GR+WQ  TIQ DFNLP RF+  YV++   +  P M+HRA+ GS+ERF GI++E++ G  
Sbjct: 413 LGREWQTSTIQFDFNLPERFDITYVDADGREKRPYMVHRALLGSLERFFGILVEHYGGAF 472

Query: 547 PLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPII 606
           P+WL+P+Q +V  ++     YAQE+   L+   +  E D   + +N KIR+   +KIP  
Sbjct: 473 PVWLAPVQVVVIPVSDVFAGYAQEVVRALREAGVRAEADLSADRMNAKIRKAQQEKIPYA 532

Query: 607 IICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +I G +E   R++ +R  G      V+L D +  + +
Sbjct: 533 VIVGQREQEGRTVSVRVRGGEQRNGVALGDFVEDVAR 569


>gi|191638692|ref|YP_001987858.1| threonyl-tRNA synthetase [Lactobacillus casei BL23]
 gi|239632065|ref|ZP_04675096.1| ser-tRNA(Thr) hydrolase [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|238693055|sp|B3WF49|SYT_LACCB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|190712994|emb|CAQ67000.1| Threonyl-tRNA synthetase (Threonine--tRNA ligase) (ThrRS)
           [Lactobacillus casei BL23]
 gi|239526530|gb|EEQ65531.1| ser-tRNA(Thr) hydrolase [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|327382733|gb|AEA54209.1| Threonyl-tRNA synthetase [Lactobacillus casei LC2W]
 gi|327385920|gb|AEA57394.1| Threonyl-tRNA synthetase [Lactobacillus casei BD-II]
          Length = 657

 Score =  575 bits (1482), Expect = e-162,   Method: Composition-based stats.
 Identities = 236/647 (36%), Positives = 367/647 (56%), Gaps = 24/647 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +TFPDG++K FP   T   + E IS SLAKKAVA  ++G +    +P+   G ++I+T +
Sbjct: 5   ITFPDGNVKQFPDGTTVKAITEGISNSLAKKAVAGKLDGDLIAYDEPIAHSGQLQIMTKD 64

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQIEK 124
           D   L V+R + A ++A A++ ++P++    G   EDGFYYD D+ +   S D+L  ++K
Sbjct: 65  DAEGLTVLRQTAAFVLAAALKDLYPDIHFGQGQATEDGFYYDTDRADGQVSVDDLPTVQK 124

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
           KM+ II  ++      LS  +A      K + +K +++E   A + +  Y+ G++ D   
Sbjct: 125 KMEAIIKENAALEPVVLSRAEA--FQAFKNDPFKKQLVE--AAGDPIKGYKLGDFVDFEE 180

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
              + S  +  K  KL+ VAGAYW+G S+ PML RIYGTA+ +++ L       +E+ + 
Sbjct: 181 KVLLPS-LKDLKHLKLLSVAGAYWQGKSSNPMLQRIYGTAYWSEKGLEDDAKRRQEAAEH 239

Query: 245 DHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQ 302
           DHR + R++DLF +      G+ +W   G  I + +  Y+  ++I D YE + TP + + 
Sbjct: 240 DHRVIGRDLDLFFVDPKVGAGLPYWMPNGATIRRVIERYIIDKEIADGYEHVYTPVLANL 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            L++ SGHWD YR +MF          D     L+PMNCP H+ ++NH ++SYRELP+R+
Sbjct: 300 DLYKTSGHWDHYREDMFPPMDMG----DGEMLELRPMNCPSHIQIYNHHIRSYRELPLRI 355

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AE G ++R E SG+L GL RVR  T +D H F   +Q+  E  KI  LI+ +Y+DF    
Sbjct: 356 AELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQVQEEFKKILRLIMDVYEDFNITD 415

Query: 423 IMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
              +LS R  K        D +W  +++++KG +D +K      ++     GE AFYGPK
Sbjct: 416 YSFRLSYRDPKNTEKYFDDDEMWTRSQSMLKGAMDDLK------LDYYEAEGEAAFYGPK 469

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +   K A+G D    TIQ+DF LP RFN  YV    E+  PVMIHR + G++ERFI  +
Sbjct: 470 LDIQTKTALGNDETMSTIQLDFMLPERFNLTYVGKDGEEHRPVMIHRGIVGTMERFIAYL 529

Query: 539 IENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
            E +KG  P WL+P QA++  + +   ++Y   I   + +  L ++ D RNE + YKIRE
Sbjct: 530 TEIYKGAFPTWLAPTQAVLIPVNNDLHLDYVNRIKKQMLAAGLRVKVDDRNEKMGYKIRE 589

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
              KKIP  ++ GDKE ++ ++ +RR+G   T++ +    I  L  E
Sbjct: 590 AQTKKIPYTVVVGDKELNDAAVSVRRYGDEHTEEEAGNMFIDALVAE 636


>gi|270290442|ref|ZP_06196667.1| threonyl-tRNA synthetase [Pediococcus acidilactici 7_4]
 gi|304384676|ref|ZP_07367022.1| threonine--tRNA ligase [Pediococcus acidilactici DSM 20284]
 gi|270281223|gb|EFA27056.1| threonyl-tRNA synthetase [Pediococcus acidilactici 7_4]
 gi|304328870|gb|EFL96090.1| threonine--tRNA ligase [Pediococcus acidilactici DSM 20284]
          Length = 647

 Score =  575 bits (1482), Expect = e-162,   Method: Composition-based stats.
 Identities = 223/651 (34%), Positives = 359/651 (55%), Gaps = 22/651 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
           ++IK+ FPDGS+K F    T  ++A+SI  SLAK AVA  +N ++ +L  P+ ++G +EI
Sbjct: 2   AEIKIEFPDGSVKPFGAGVTVLEIAKSIGTSLAKNAVAGKVNDELVNLDQPLDQDGKVEI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELA 120
           IT +      V  +S A ++  A++SI+PE+++     IE GFY D DKE Q  S DEL 
Sbjct: 62  ITKDSEDGQLVNWNSAALVLTSAIKSIYPEIRIGEIGNIEHGFYADTDKEGQQISVDELP 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IE KM+++I        + LS E A    +   + Y+ ++++       V +Y      
Sbjct: 122 AIEDKMKDMIQAKVALSHEMLSVEDALA--KVDSDPYQAKLVKKNAKDGKVNVYDVDGSL 179

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
            +     +     +K   KL+ VAGAYW G S+ PML RIYGT++  Q++L   L   +E
Sbjct: 180 IVSDCVALPDASGLK-AIKLLSVAGAYWEGKSSNPMLQRIYGTSFFNQKDLDAELARQKE 238

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           + +RDHR +  ++DLF +  +   G+ +W   G  I +T+  Y+  ++++  Y+ + TP 
Sbjct: 239 ARERDHRVIGNDLDLFFVDPEVGAGLPYWMPNGATIRRTIERYIIDKEVQHGYQHVYTPV 298

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +++   ++ SGHW  YR +MF          D     L+PMNCP H+ V+ H ++SYREL
Sbjct: 299 LMNLDAYKTSGHWQHYREDMFPPMDMG----DGEMLELRPMNCPSHIQVYKHHIRSYREL 354

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  T +D H F   +Q+  E  K+  L++ +Y+DF
Sbjct: 355 PLRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVAPDQIQEEFKKVLQLMVEVYRDF 414

Query: 419 GFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
                  +LS R  +        D +W+ +++++K  +D +       ++     GE AF
Sbjct: 415 DITDYTFRLSYRDPENTEKYFDDDEMWNHSQSMLKAAMDDLG------LDYVEAEGEAAF 468

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +   K A+G +    TIQ+DF LP +F+  YV +  E+  PVMIHR +  ++ERF
Sbjct: 469 YGPKLDVQTKTALGNEETLSTIQLDFMLPKQFDLHYVGADGEEHRPVMIHRGLVSTMERF 528

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINY 593
              +IE +KG  P WL+P Q  +  +      EYA ++   +    + +E D RNE + Y
Sbjct: 529 TAYLIEMYKGAFPTWLAPKQVTIIPVKDDLHGEYADKLREQMADQDIRVEVDHRNEKMGY 588

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIRE   +KIP I++ GD E    ++ +RR+G   +Q VS+   +  +  +
Sbjct: 589 KIREAQTQKIPYILVVGDNEMDSNAVSVRRYGEDDSQTVSVDQFMQDIKAD 639


>gi|297562207|ref|YP_003681181.1| threonyl-tRNA synthetase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296846655|gb|ADH68675.1| threonyl-tRNA synthetase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 657

 Score =  575 bits (1481), Expect = e-161,   Method: Composition-based stats.
 Identities = 251/668 (37%), Positives = 389/668 (58%), Gaps = 44/668 (6%)

Query: 1   MPS--DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG- 57
           M +  ++ +T   G+ +    + T     E+      +  +A  +NG+  DL+  + EG 
Sbjct: 1   MSAAPELHITLA-GTPRAVAANTTAGQALEA----DGRTVIAALVNGEPRDLARELHEGD 55

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSD 117
           ++E I  +     A++RHS AH++A+AVQ ++PE ++ IGP +E+GFYYDFD  +PF+  
Sbjct: 56  TVEPIAIDSEEGRAILRHSTAHVLAQAVQELFPEAKLGIGPPVENGFYYDFDVAEPFTPA 115

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN------- 170
           +L  IEKKMQ+I+ +   F ++ +S E+AR   E   E YK+E++               
Sbjct: 116 DLKSIEKKMQQIVKQGQRFDRRVVSDEEARA--ELATEPYKLELIGLKGGATEAAEGAGV 173

Query: 171 ------VTLY-----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPML 217
                 +T+Y     R GE  W DLCRGPH+ +T  +  F KLM+ A AYWRG    P L
Sbjct: 174 EVGAGELTIYDNVHPRTGELCWKDLCRGPHLPTTRVIPAF-KLMRTAAAYWRGKETNPQL 232

Query: 218 SRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIF 276
            R+YGTAW +++ L  +L FLEE+EKRDHRKL  E+DLF I ++ GSG+  +H KG  + 
Sbjct: 233 QRVYGTAWESKEALKDHLTFLEEAEKRDHRKLGSELDLFSIPDEIGSGLAVFHPKGGTVR 292

Query: 277 QTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFA 335
           + +  Y RR+ ++  YE + TP      L+++SGH D Y   M+     D      + + 
Sbjct: 293 RVMEDYSRRRHEEDGYEFVYTPHATKGTLFEKSGHLDWYADGMYPPMQLDG----GQDYY 348

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC 395
           LKPMNCP H  +F+   +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDD+H++C
Sbjct: 349 LKPMNCPMHHLIFDARGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDSHIYC 408

Query: 396 TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDT 454
           TKEQM +E   +   ++ + +D+G +   ++LST+  +  VG+D +W++A  I++     
Sbjct: 409 TKEQMADELDSLLTFVLDLLRDYGLDDFYLELSTKDPEKYVGTDEVWEEATEILREAAQ- 467

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH 514
                +  +   +     AFYGPK     KDAIGR WQ  TIQVDFN+P RF+  Y  + 
Sbjct: 468 -----KQGLELVLDPAGAAFYGPKISVQAKDAIGRTWQMSTIQVDFNMPERFDLEYTAAD 522

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANL 574
             +  PV+IHRA+FGSIERF  +++E++ G  P WL+P+QA+   I    V Y +E+A  
Sbjct: 523 GSRQRPVVIHRALFGSIERFFAVLLEHYAGAFPAWLAPVQAVGIPIADEHVPYLRELAAR 582

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           L++  + +E D  ++ +  KIR    +K+P +++ GD++ S+ ++  R    +    V L
Sbjct: 583 LRAEGIRVEVDASDDRMQKKIRNAQKQKVPFMLLAGDEDVSKNAVSFRYRDGSQNNGVPL 642

Query: 635 LDAIPILT 642
            +A+  + 
Sbjct: 643 DEAVAEIV 650


>gi|295839903|ref|ZP_06826836.1| threonine-tRNA ligase [Streptomyces sp. SPB74]
 gi|197696732|gb|EDY43665.1| threonine-tRNA ligase [Streptomyces sp. SPB74]
          Length = 658

 Score =  575 bits (1481), Expect = e-161,   Method: Composition-based stats.
 Identities = 259/664 (39%), Positives = 385/664 (57%), Gaps = 38/664 (5%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEI 61
           SD+++     S ++  V  TG+  A+       +  VA  ++G++ DL+  + +G  +E 
Sbjct: 2   SDVRVIIQRDSERDERVVTTGTTAADLFPGE--RTVVAARVDGELRDLAYVLGDGERVEP 59

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +       L ++RHS AH+MA+AVQ I+PE ++ IGP ++DGFYYDFD E+PF+ ++L  
Sbjct: 60  VQISSEDGLNILRHSTAHVMAQAVQEIFPEAKLGIGPPVKDGFYYDFDVEKPFTPEDLKA 119

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL------------ESIPAKE 169
           +EKKMQEI  R   F ++ +S ++ARE  E   E YK+E++            +      
Sbjct: 120 VEKKMQEIQKRGQRFARRVVSEDEARE--ELAAEPYKLELIGLKGGSASDDGSDVEVGGN 177

Query: 170 NVTLYRQGE-------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYG 222
            +T+Y   +       W DLCRGPH+ +T  +  F KLM+ A AYWRG    PML RIYG
Sbjct: 178 ELTIYDNLDAKTGELCWKDLCRGPHLPTTRLIPAF-KLMRNAAAYWRGSEKNPMLQRIYG 236

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLIS 281
           TAW ++ EL  +L FL E+EKRDHRKL  E+DLF   E+ G G+  +H KG  I + +  
Sbjct: 237 TAWPSKDELKAHLDFLAEAEKRDHRKLGNELDLFSFPEEVGPGLAVFHPKGGIIRRAMED 296

Query: 282 YMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
           Y RR   ++ YE + +P      L+Q+SGH D Y   M+     D    +   + LKPMN
Sbjct: 297 YSRRRHEEEGYEFVYSPHTTKGALFQKSGHLDWYADGMYPPMQLD----EGVDYYLKPMN 352

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
           CP H  +F+   +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDDAH++CTKEQM
Sbjct: 353 CPMHNLIFDARGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRSRGFTQDDAHIYCTKEQM 412

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDTIKNSS 459
             E  K    ++++ +D+G +   ++LST+ EK  VGSD +W++A + +  V +      
Sbjct: 413 AEELDKTLTFVLNLLRDYGLDDFYLELSTKDEKKFVGSDEVWEEATSTLAEVAE------ 466

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
           +  +      G  AFYGPK     +DAIGR WQ  TIQ+DFNLP RF+  Y  +   +  
Sbjct: 467 KQGLPLVPDPGGAAFYGPKISVQARDAIGRTWQMSTIQLDFNLPERFDLSYTAADGSRQR 526

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH 579
           PVMIHRA+FGSIERF  +++E++ G +P WL+P+QA+   +  + V Y +E A   +   
Sbjct: 527 PVMIHRALFGSIERFFAVLLEHYAGAMPPWLAPVQAVGIPVGDAHVPYLKEFAAEARKQG 586

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
           L ++ D  ++ +  KIR H  +K P +II GD + +  ++  R    +    +   +A+ 
Sbjct: 587 LRVDVDASSDRMQKKIRNHQKQKTPFMIIVGDDDMNAGTVSFRHRDGSQENGIPKGEALA 646

Query: 640 ILTK 643
            L  
Sbjct: 647 KLRD 650


>gi|158313600|ref|YP_001506108.1| threonyl-tRNA synthetase [Frankia sp. EAN1pec]
 gi|238686857|sp|A8LE67|SYT_FRASN RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|158109005|gb|ABW11202.1| threonyl-tRNA synthetase [Frankia sp. EAN1pec]
          Length = 658

 Score =  574 bits (1480), Expect = e-161,   Method: Composition-based stats.
 Identities = 252/662 (38%), Positives = 375/662 (56%), Gaps = 38/662 (5%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI-EI 61
           SD+++T   G      V  TG+  AE       +  +A  + G   DLS P+  G + E 
Sbjct: 2   SDVRVTVQRGQQAEERVVRTGTTAAELFDGE--RSVIAARVGGLQRDLSHPLAAGDVVEP 59

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           IT + P   A++RHSCAH++A+AVQ ++P+ ++ IGP I+DGFYYDFD E+PF+ ++L  
Sbjct: 60  ITVDSPDGRAIVRHSCAHVVAQAVQDLFPKARLGIGPPIQDGFYYDFDVERPFTPEDLKA 119

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIP------------AKE 169
           +EK+ QEII     F ++ +S ++AR   E   E YK+E++                 + 
Sbjct: 120 VEKRAQEIIKAGQRFARRVVSEDEARA--ELADEPYKIELIGLKSSAGDDAEAGVEVGEG 177

Query: 170 NVTLYRQGE-------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYG 222
            +T+Y   +       W DLCRGPHV +T  +  F      A AYWRG    P L RIYG
Sbjct: 178 ELTIYDNLDPKSGELCWKDLCRGPHVPTTRHIPAFAVQRS-AAAYWRGSERNPQLQRIYG 236

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLIS 281
           TAW ++  L  Y + L E+EKRDHR+L  E+DLF    + G G+  +H KG  I   +  
Sbjct: 237 TAWESRDALKAYQHRLAEAEKRDHRRLGAELDLFSFPTEIGPGLAVFHPKGGAIRTVMED 296

Query: 282 YMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
           Y RR  I+  YE +NTP +    L++ SGH D +   M+     D        + LKPMN
Sbjct: 297 YSRRRHIEAGYEFVNTPHITKSDLYEISGHLDWFADGMYPPMQLDG----GADYYLKPMN 352

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
           CP H+ +F    +SYRELP+RL EFG+VYR E SG +HGL RVRG TQDDAH+FC +EQ+
Sbjct: 353 CPMHILIFRSRGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRVRGLTQDDAHLFCAREQL 412

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR-VGSDALWDDAENIMKGVLDTIKNSS 459
             E   +   ++ + +D+G E   ++LSTRP  + +GSD  W++A  +++        +S
Sbjct: 413 PTELDTVLKFVLGLLRDYGLEDFYLELSTRPPGKAIGSDKEWEEATELLREA------AS 466

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
           +  +   +  G GAFYGPK     +DAIGR WQ  TIQVDF LP RF+  Y  +   +  
Sbjct: 467 KQDLELVMDEGGGAFYGPKISVQARDAIGRTWQLSTIQVDFQLPQRFDMTYQAADGTRQR 526

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH 579
           P MIHRA+FG+IERF  I++E++ G LP WL+P+Q +   IT   V Y  ++A  L+   
Sbjct: 527 PFMIHRALFGTIERFFAILLEHYAGALPPWLAPVQVVGIPITDEHVPYLTDVAAKLRQRG 586

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
           + +E D  ++ +  KIR    +K+P +++ GD++ ++ ++  R    T    V + +A+ 
Sbjct: 587 IRVEVDSSDDRMQKKIRTAQKQKVPFMLLAGDEDVAKGAVSFRFRDGTQRNGVPVDEAVA 646

Query: 640 IL 641
            +
Sbjct: 647 EI 648


>gi|37522455|ref|NP_925832.1| threonyl-tRNA synthetase [Gloeobacter violaceus PCC 7421]
 gi|73919794|sp|Q7NCU0|SYT_GLOVI RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|35213456|dbj|BAC90827.1| threonyl-tRNA synthetase [Gloeobacter violaceus PCC 7421]
          Length = 627

 Score =  574 bits (1480), Expect = e-161,   Method: Composition-based stats.
 Identities = 248/592 (41%), Positives = 359/592 (60%), Gaps = 15/592 (2%)

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           I+   DP  L  IRHS +HI+A AVQ ++PE +V IGP IE+GFYYDFD+  PF+ ++L 
Sbjct: 36  ILRQSDPEKLHRIRHSTSHILAMAVQKLFPETKVTIGPAIENGFYYDFDRPTPFTPEDLK 95

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IEK+M+ I+ +  P +++ +  E  RE  E+  E YK+E+ E       V+LYR G+W+
Sbjct: 96  KIEKEMRRIVQQKLPLVREEVPREAMRERLEALGEPYKLELFEGFDHDAPVSLYRTGDWW 155

Query: 181 DLCRGPHVRSTGQVKK-FFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           DLC GPHV ST ++    FKL  VAGAYWRGD  R  L RIYGTAW T ++L ++L   E
Sbjct: 156 DLCAGPHVESTAEIHPNAFKLRSVAGAYWRGDEKRAQLQRIYGTAWETPEQLEEFLRREE 215

Query: 240 ESEKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTP 297
           E++KRDHRKL RE+ LF  ++  G G+  W  KG  +   L  ++R  ++K  Y+++ TP
Sbjct: 216 EAKKRDHRKLGRELGLFVFSDLVGPGLPLWTPKGALLRYILEEFLRKEQVKRGYQQVVTP 275

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    L++ SGHW  Y+ +MF +    +       F +KPMNCP H+ ++   L SYRE
Sbjct: 276 HIARVDLFKTSGHWFKYKDDMFPLMATSEEEGAEEGFVMKPMNCPFHIQIYKSELHSYRE 335

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+RLAEFG+VYR E SG L GL RVRGFT DD+H+F T EQ+ +E  K+ +LI  +++ 
Sbjct: 336 LPIRLAEFGTVYRYEQSGELGGLTRVRGFTVDDSHLFVTPEQLDDEFKKVVDLIQFVFRS 395

Query: 418 F----GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
                GF   +       +K +GSDA W+ A+  +      +       +   V  GE A
Sbjct: 396 LQLGDGFSARLSFRDPTSDKYIGSDAAWEKAQAAILKASQDLG------LKYFVAEGEAA 449

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK ++I +DA+GR+WQ GT+QVD+ LP RF   YV     +  PVMIHRA FGS+ER
Sbjct: 450 FYGPKLDFIFRDALGREWQLGTVQVDYILPERFELEYVAEDGSRRRPVMIHRAPFGSLER 509

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           FI I+IE+F G+ PLWL+P Q  +  +T   V YA+ + + L S  +  E D  +E +  
Sbjct: 510 FIAILIEHFAGDFPLWLAPEQVRILPVTDQFVGYAESVKDRLVSLEMRAEVDASSERLGK 569

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRF--GSTTTQKVSLLDAIPILTK 643
           KIR     K+P++++ G+ EA+  ++ +R    G      + + +AI  L +
Sbjct: 570 KIRNGETAKVPVLLVVGESEANSGTVAVRTRVEGEKDKGTLPVEEAIAYLQE 621


>gi|227534800|ref|ZP_03964849.1| threonyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
 gi|227187556|gb|EEI67623.1| threonyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
          Length = 674

 Score =  574 bits (1480), Expect = e-161,   Method: Composition-based stats.
 Identities = 236/647 (36%), Positives = 366/647 (56%), Gaps = 24/647 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +TFPDG++K FP   T   + E IS SLAKKAVA  ++G +    +P+   G ++I+T +
Sbjct: 22  ITFPDGNVKQFPDGTTVKAITEGISNSLAKKAVAGKLDGDLIAYDEPIAHSGQLQIMTKD 81

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQIEK 124
           D   L V+R + A ++A A++ ++P++    G   EDGFYYD D+ +   S D+L  ++K
Sbjct: 82  DAEGLTVLRQTAAFVLAAALKDLYPDIHFGQGQATEDGFYYDTDRADGQVSVDDLPTVQK 141

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
           KM+ II  ++      LS  +A      K + +K +++E   A + +  Y+ G++ D   
Sbjct: 142 KMEAIIKENAALEPVVLSRAEA--FQAFKNDPFKKQLVE--AAGDPIKGYKLGDFVDFEE 197

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
              + S  +  K  KL+ VAGAYW+G S+ PML RIYGTA+ +++ L       +E+ + 
Sbjct: 198 KVLLPS-LKDLKHLKLLSVAGAYWQGKSSNPMLQRIYGTAYWSEKGLEDDAKRRQEAAEH 256

Query: 245 DHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQ 302
           DHR + R++DLF +      G+ +W   G  I + +  Y+  ++I D YE + TP + + 
Sbjct: 257 DHRVIGRDLDLFFVDPKVGAGLPYWMPNGATIRRVIERYIIDKEIADGYEHVYTPVLANL 316

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            L++ SGHWD YR +MF          D     L+PMNCP H+ ++NH ++SYRELP+R+
Sbjct: 317 DLYKTSGHWDHYREDMFPPMDMG----DGEMLELRPMNCPSHIQIYNHHIRSYRELPLRI 372

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AE G ++R E SG+L GL RVR  T +D H F   +Q+  E  KI  LI+ +Y+DF    
Sbjct: 373 AELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQVQEEFKKILRLIMDVYEDFNITD 432

Query: 423 IMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
              +LS R  K        D +W  +++++KG +D +K      ++     GE AFYGPK
Sbjct: 433 YSFRLSYRDPKNTEKYFDDDEMWTRSQSMLKGAMDDLK------LDYYEAEGEAAFYGPK 486

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +   K A+G D    TIQ+DF LP RFN  YV    E+  PVMIHR + G++ERFI  +
Sbjct: 487 LDIQTKTALGNDETMSTIQLDFMLPERFNLTYVGKDGEEHRPVMIHRGIVGTMERFIAYL 546

Query: 539 IENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
            E +KG  P WL+P QA++  + +   ++Y   I   +    L ++ D RNE + YKIRE
Sbjct: 547 TEIYKGAFPTWLAPTQAVLIPVNNDLHLDYVNRIKKQMLVAGLRVKVDDRNEKMGYKIRE 606

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
              KKIP  ++ GDKE ++ ++ +RR+G   T++ +    I  L  E
Sbjct: 607 AQTKKIPYTVVVGDKELNDAAVSVRRYGDEHTKEEAGNMFIDALVAE 653


>gi|116333673|ref|YP_795200.1| threonyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
 gi|122269640|sp|Q03RK3|SYT_LACBA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|116099020|gb|ABJ64169.1| Threonyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
          Length = 647

 Score =  574 bits (1480), Expect = e-161,   Method: Composition-based stats.
 Identities = 228/651 (35%), Positives = 364/651 (55%), Gaps = 23/651 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
           +DI + FPDG++K FP   T +DVA+SIS SLAKKAVA  ++G++ D   P+  +GSIEI
Sbjct: 2   ADISIKFPDGAVKAFPAGTTPADVAKSISISLAKKAVAAKLDGQLVDYLTPLASDGSIEI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELA 120
           +T +    L V+R++ A ++  A++  +P +++      EDGF+ D DK+ Q  S DEL 
Sbjct: 62  VTKDSDDGLTVLRNTTAALLRIALKKEFPAIRLGKVSADEDGFFVDTDKDDQQVSVDELD 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            +   ++++++      +  +S   A    +  +       L +    ++V   + G++ 
Sbjct: 122 ALAVIVEKLVSDKLDIERITVSKADALADAKDDQFTT---ALINAVDGDSVPFLKIGDYQ 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
            L  G  + +TG VKKF KL+ VAGAYW+G S+ PML RIYGTA+  Q +L   L   +E
Sbjct: 179 ILSDGAQLTNTGDVKKF-KLLSVAGAYWQGKSSNPMLQRIYGTAFYKQADLDADLARRQE 237

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           + +RDHR +  ++DLF +      G+ +W   G  I +T+  Y+  +++ + Y+ + TP 
Sbjct: 238 ARERDHRVIGNQLDLFFVDPKVGAGLPYWMPNGATIRRTIERYIIDKEVSNGYQHVYTPV 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           + +  L++QSGHW  YR +MF          D     L+PMNCP H+ V+NH ++SYREL
Sbjct: 298 LANLDLYKQSGHWAHYREDMFPPMDMG----DGEMLELRPMNCPSHIQVYNHHIRSYREL 353

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  T +D H F   EQ+ +E   I +L++ +Y DF
Sbjct: 354 PLRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVAPEQIQDEFKSILDLMVKVYADF 413

Query: 419 GFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
             +    +LS R  K        D +W++A+ ++KG +D +       +      GE AF
Sbjct: 414 DIKDYTFRLSYRDPKNTEKYFDDDEMWNNAQAMLKGAMDDLG------LPYVEAEGEAAF 467

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +   K A+G +    TIQ+DF LP RF+  YV +  E+  PVMIHR +  ++ERF
Sbjct: 468 YGPKLDVQTKTALGNEETLSTIQLDFMLPERFDLHYVGADGEEHRPVMIHRGLVSTMERF 527

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINY 593
              + E +KG  P WL+P Q  +  ++      YA ++A  LK+  + +  D R E + Y
Sbjct: 528 TAYLTEIYKGAFPTWLAPKQVTIIPVSEEKHGAYADKLAAELKAADIRVNVDKRGEKMGY 587

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            IR+    KIP  ++ G+ E S  S+ +R++G   T  +S    +  +  +
Sbjct: 588 LIRDAQTHKIPYTLVVGEDEMSNGSVSVRKYGENQTTSMSSDAFVKEILAD 638


>gi|330932301|ref|XP_003303723.1| hypothetical protein PTT_16056 [Pyrenophora teres f. teres 0-1]
 gi|311320083|gb|EFQ88182.1| hypothetical protein PTT_16056 [Pyrenophora teres f. teres 0-1]
          Length = 776

 Score =  574 bits (1479), Expect = e-161,   Method: Composition-based stats.
 Identities = 239/694 (34%), Positives = 359/694 (51%), Gaps = 66/694 (9%)

Query: 3   SDIKLTFPDGSIKNFPVHAT-GSDVAESISRSLAKKAVAVAIN-----GKVCDLSDPVRE 56
             I +T  DG         T  +D+A +I++SL ++ V   ++       + DL  P+ +
Sbjct: 85  EKITITLEDGKNIEGESWVTSPADIARNIAKSLFERTVVARLDKGTPEETLWDLERPLEK 144

Query: 57  -GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK--EQP 113
              +E++  +DP    V  HS AHI+ EA +  +    + IGP IEDGFYY+        
Sbjct: 145 SCKLELLPFDDPEGKKVFWHSSAHILGEASERRF-GCDLCIGPPIEDGFYYEMALPDNAA 203

Query: 114 FSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES-IPAKENVT 172
               +   +E  +  I+    PF +  LS +   E+F+S    YK  I++  I    + T
Sbjct: 204 VDPADHKPLETIVSSIVKEKQPFERLTLSKDDLLEMFKS--NKYKQHIIKDKIADGTSTT 261

Query: 173 LYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELT 232
           +YR G   DLCRGPHV  TG++K+F K+MK + +Y+ GD+    L RIYG ++  +  + 
Sbjct: 262 VYRNGPLIDLCRGPHVPHTGRIKQF-KVMKNSASYFLGDAKNDSLQRIYGVSFPDKDAMQ 320

Query: 233 QYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDY 291
            +L FLEE+ KRDHRK+ +E +LF   E   G  F+   G  I+ TL +++R +     Y
Sbjct: 321 AHLKFLEEAAKRDHRKIGKEQELFFFHEFSPGSCFFLPHGQIIYNTLQAFLREEYWNRGY 380

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           +E+ +P + +  LW+ SGHW  Y  +MF          +   +ALKPMNCPGH  +F H 
Sbjct: 381 QEVGSPNMYNSALWKISGHWQHYADDMFTFDV------EKEKWALKPMNCPGHCLIFKHR 434

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI 411
            +SYRELP+R+A+FG ++RNE SG+L GL RVR F QDD HVFCT++Q+  E   + + +
Sbjct: 435 ERSYRELPIRMADFGILHRNEASGALTGLTRVRRFQQDDTHVFCTQDQITEEISALFDFL 494

Query: 412 ISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
            ++Y  FGF   M KLSTRPE  +G    WD AE  +   L+    +        +  G+
Sbjct: 495 RAVYGKFGFTFKM-KLSTRPEGFLGDIETWDKAEGKLTEALNQFTAAGGSA--WELNPGD 551

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH----------------- 514
           GAFYGPK +  + DA+ R++QC TIQ+DF LP++F   Y+ S                  
Sbjct: 552 GAFYGPKIDITISDALKREFQCATIQLDFQLPNQFELEYMTSEVIPVKNKDQLQEGGHIE 611

Query: 515 ---------------------SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI 553
                                     PVMIHRA++GS ERFI I+ E+F G  P WLSP 
Sbjct: 612 QKKEKLEGADVTIPKKIKEPQPGYARPVMIHRAIYGSFERFIAILTEHFAGRWPFWLSPR 671

Query: 554 QAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
           Q ++  +   A +Y +E+   L+ H L  + D    T+  KIR   +     I++ G +E
Sbjct: 672 QVMIIPVMPGANDYVKEVQAELRKHRLHADIDISGNTMQKKIRTAQLALYNFIMVVGAEE 731

Query: 614 ASERSIGIRRFGSTTTQK----VSLLDAIPILTK 643
              R++  R      TQ+    V L +A+  L +
Sbjct: 732 QQARAVNWRNRDDQETQQRGVIVPLDEAVKKLVE 765


>gi|269836488|ref|YP_003318716.1| threonyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
 gi|269785751|gb|ACZ37894.1| threonyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
          Length = 596

 Score =  574 bits (1479), Expect = e-161,   Method: Composition-based stats.
 Identities = 250/599 (41%), Positives = 376/599 (62%), Gaps = 21/599 (3%)

Query: 50  LSDPVREGSIEIITPEDPRSLAV--IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD 107
           +S    E  ++ +  E+   L +  +RHS AH+MA+AV  ++P  ++AIGP IE+GFYYD
Sbjct: 1   MSQIAEEMDLQ-VDVENQEELELARMRHSAAHVMAQAVLEMFPGAKLAIGPAIENGFYYD 59

Query: 108 FDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPA 167
           FD  +  + D+L +IE++M+EI     PF ++ +S E+A +L     + YK+EI++ +P 
Sbjct: 60  FDLPRSLTPDDLGKIEERMREIKQGAYPFERREVSREEALKL--FADQPYKIEIIQDLPE 117

Query: 168 KENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNT 227
              ++ Y Q  + DLCRGPHV +T Q+  F KL+ VAGAYWRGD  RPML RIYGT+W +
Sbjct: 118 DAVISTYTQDSFTDLCRGPHVDNTSQIGHF-KLLNVAGAYWRGDEKRPMLQRIYGTSWRS 176

Query: 228 QQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISY-MRR 285
           ++EL  YL+ LEE+++RDHR+L RE+DLF + ED G+G+I WH KG  I   +  +    
Sbjct: 177 EEELQDYLHRLEEAQRRDHRRLGRELDLFSVNEDIGAGLILWHPKGAMIRHLIERFETEE 236

Query: 286 KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +   Y+ + TP +    ++++SGH ++Y+ NM++         +   + LKPMNCPGH+
Sbjct: 237 HLARGYQLVYTPHIASGDIYRKSGHLETYQENMYSPMDI-----EGAPYYLKPMNCPGHI 291

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            ++N  ++SYR+LP+RLAE G+VYR E SG+LHG++RVRGFTQDDAH+FC  +Q+ +E  
Sbjct: 292 MIYNSQVRSYRDLPIRLAELGTVYRYERSGTLHGMLRVRGFTQDDAHIFCRPDQLEDEIK 351

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
            + +L +   + FG+E     L+TRPEK +GSD  W+ A   +   L  +       I  
Sbjct: 352 GVLDLALYFARVFGYEYEA-FLATRPEKSIGSDENWERATETLANALRNMG------IPY 404

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
            +  G GAFYGPK +    D++GR+W   TIQVDFNLP RF+A YV    E+   VM+HR
Sbjct: 405 EIDPGAGAFYGPKIDIKFLDSLGREWTGPTIQVDFNLPERFDATYVGEDGERHRVVMVHR 464

Query: 526 AVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD 585
            V GS+ERF+G +IE++ G  P+WL+P+QA V  I    V YA E+A  LK   L +E +
Sbjct: 465 TVLGSMERFVGGLIEHYAGAFPVWLAPVQAEVIPIADRHVPYAHEVAARLKEADLRVEVN 524

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
             N+ +  KIR   +++IP +++ GDKEA   ++ +R   +     + + + I  L KE
Sbjct: 525 DSNDRMQAKIRRAQLQRIPYMLVVGDKEAEAGTVAVRLRTNENLGAMPVDEFIA-LAKE 582


>gi|307719284|ref|YP_003874816.1| threonyl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
 gi|306533009|gb|ADN02543.1| threonyl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
          Length = 578

 Score =  574 bits (1479), Expect = e-161,   Method: Composition-based stats.
 Identities = 258/577 (44%), Positives = 369/577 (63%), Gaps = 16/577 (2%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           +  IRHS AHIMA+AV  ++PE + AIGP I+ GFYYDFD  +  + ++L +IE+ M++ 
Sbjct: 6   IERIRHSAAHIMADAVLRLFPEAKFAIGPAIDTGFYYDFDLPRSLTPEDLEKIEELMRKT 65

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
           I  D PF ++ +S E+ARELF+   + YK+EILE IP  E V++YR G + DLCRGPHV 
Sbjct: 66  IEEDLPFEREVISREEARELFK--DQPYKLEILEEIPEGEEVSIYRHGTFVDLCRGPHVE 123

Query: 190 STGQVKK-FFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRK 248
            TGQ+     KL+ +AGAYWRGD  RPML RIYGTAW+T +EL QYL  L+E EKRDHR+
Sbjct: 124 RTGQINPDAVKLLSIAGAYWRGDERRPMLQRIYGTAWHTPKELRQYLEHLKEVEKRDHRR 183

Query: 249 LAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQ 306
           L +E+DLF + E+ G G+I+WH KG +I   + ++ R   +   YE + TP +    LW+
Sbjct: 184 LGKELDLFSVHEEAGPGLIYWHPKGARIRLEIENFWREQHLARGYEVLYTPHIGKAWLWE 243

Query: 307 QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFG 366
            SGH   Y+ NM+A         D   + +KPMNCP H+ ++   L+SYRELP+R AE G
Sbjct: 244 TSGHLSFYKENMYAPMEV-----DKSDYYIKPMNCPFHIMIYKTRLRSYRELPLRWAELG 298

Query: 367 SVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK 426
           +VYR E SG LHGL+RVRGFTQDDAH+FCT EQ+ +E L+     + +++ FGF  +   
Sbjct: 299 TVYRYERSGVLHGLLRVRGFTQDDAHIFCTPEQIEDEILETLRFSLFMWETFGFSDVKAY 358

Query: 427 LSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDA 486
           LSTRPEK VG    W+ A   ++  ++      ++ ++  V  G GAFYGPK +  ++DA
Sbjct: 359 LSTRPEKSVGEPERWEQATGSLRKAIE------REGLDYEVDEGGGAFYGPKIDIKVRDA 412

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNL 546
           +GR+WQ  TIQ DFNLP RF+  YV++   +  P M+HRA+ GS+ERF GI+IE++ G  
Sbjct: 413 LGREWQTSTIQFDFNLPERFDITYVDADGREKRPYMVHRALLGSLERFFGILIEHYGGAF 472

Query: 547 PLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPII 606
           P+WL+P+Q +V  ++     YAQE+   L+   +  E D   + +N KIR+   +KIP  
Sbjct: 473 PVWLAPVQVVVIPVSDVFAGYAQEVVRALREAGVRAEADLSADRMNAKIRKAQQEKIPYA 532

Query: 607 IICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +I G +E   R++ +R  G      V+L   +  + +
Sbjct: 533 VIVGQREQEGRTVSVRVRGGEQRNGVALGAFVEDVAR 569


>gi|260589197|ref|ZP_05855110.1| threonine--tRNA ligase [Blautia hansenii DSM 20583]
 gi|260540278|gb|EEX20847.1| threonine--tRNA ligase [Blautia hansenii DSM 20583]
          Length = 658

 Score =  573 bits (1477), Expect = e-161,   Method: Composition-based stats.
 Identities = 237/655 (36%), Positives = 361/655 (55%), Gaps = 20/655 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T  DGS K +    +  ++A  IS  LA+ A A  +NG+V DL   V  +  + I+T  
Sbjct: 3   ITLKDGSKKEYAESKSVYEIALDISEGLARAACAGEVNGEVVDLRTQVSEDCELNILTAN 62

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D + LA +RH+ +H++AEAV++++PE ++AIGP I+ GFYYDFD E  FS +EL  +EK+
Sbjct: 63  DEKGLAALRHTASHVLAEAVKNLYPEAKLAIGPSIDTGFYYDFDHE-SFSREELDALEKE 121

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M++II + +   +  +  E+A +  E K E YKVE+++ +P  E ++ Y QG++ DLC G
Sbjct: 122 MKKIIKKGAKIQRYTMPREEAIKFMEEKGEDYKVELIKDLPEGEEISFYSQGDFVDLCAG 181

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PH+ ST  VK F KL+  +GAYWRGD    MLSRIYGTA++ + EL +YL  LEE++KRD
Sbjct: 182 PHLMSTKGVKAF-KLISSSGAYWRGDEKNKMLSRIYGTAFSKKDELNEYLEQLEEAKKRD 240

Query: 246 HRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEINTPQVLDQ 302
           H KL REM LF      G G+     KG  + + L  ++     +   Y    TP +   
Sbjct: 241 HNKLGREMGLFTTVDVIGQGLPLLMPKGVIMLKELQRWIEDLEDNEWGYVRTKTPLMAKN 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            L++ SGHWD Y+  MF +    D  KD   FAL+PM CP    V+     SYRELP+R 
Sbjct: 301 DLYKISGHWDHYKEGMFVL---GDEEKDKEVFALRPMTCPFQYYVYKANQHSYRELPIRY 357

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            E  +++RNE SG +HGL RVR FT  + H+    +QM  E      L     +  G E+
Sbjct: 358 GETSTLFRNEDSGEMHGLTRVRQFTISEGHLIVRPDQMVEEFKGCLALAKHCLETLGVEE 417

Query: 423 IMVKL-----STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
            +            EK +G   +W++ E  ++ +L  +       +     +GE AFYGP
Sbjct: 418 DVTYHLSKWDPENKEKYIGEPEVWEETEGHIRNILTELG------VPFVEDVGEAAFYGP 471

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +   K+  G++    TIQ D  L  +F+ +Y++ + +K  P +IHR   G  ER +  
Sbjct: 472 KVDINAKNVYGKEDTMITIQWDALLAEQFDMYYIDENGDKKRPYIIHRTSMGCYERTLAW 531

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE + G  P WL P Q  V  I+    +YA E+   LK++ +    D R+E I YKIRE
Sbjct: 532 LIEKYAGLFPTWLCPEQVRVLPISEKYGDYANEVQKQLKANGIRSSVDNRSEKIGYKIRE 591

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
             ++K+P +++ G KE  ++ + +R        + +L + I  + KE    + +K
Sbjct: 592 ARLEKVPYMLVVGAKEEEDKVVSVRSRYLGDEGQKTLSEFIDAICKEIRTKEIRK 646


>gi|268319910|ref|YP_003293566.1| threonyl-tRNA synthetase 1 [Lactobacillus johnsonii FI9785]
 gi|262398285|emb|CAX67299.1| threonyl-tRNA synthetase 1 [Lactobacillus johnsonii FI9785]
          Length = 643

 Score =  573 bits (1477), Expect = e-161,   Method: Composition-based stats.
 Identities = 223/644 (34%), Positives = 351/644 (54%), Gaps = 23/644 (3%)

Query: 6   KLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITP 64
            +T PDGS K+F    +  ++A SI+ SL K AV   ING +  L   V  +    IIT 
Sbjct: 4   SVTLPDGSKKDFDKAVSVKELASSIATSLGKAAVGAKINGVMKPLDYIVDEDVDAAIITD 63

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           +D   L ++R + A ++    +  +PE+++ +    E GF+ D DKE      EL ++EK
Sbjct: 64  KDEEGLDILRATAAFLLEAVAKRKYPELRLGMHEADEGGFFVDTDKEDQIKVTELPELEK 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
            MQ+ I          +   +  E+F+   + +K+++L+    ++ V +Y+ G++ D   
Sbjct: 124 AMQKAIKNGEKIEYTSMKKSELEEIFK--DDQFKLDLLKD--EEDEVAVYKLGDFVDFGF 179

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
              + +TG++K F KL+ VAGAYW G S+ PML RI+GTA+  +  L + L    E ++R
Sbjct: 180 DALLPNTGKIKNF-KLLSVAGAYWLGKSSNPMLQRIFGTAFFKKAALDEDLKRRAEIKER 238

Query: 245 DHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQ 302
           DHR + R++DLF +      G+ +W  KG  I + +  Y+  +++ D YE + TP +++ 
Sbjct: 239 DHRTIGRDLDLFFVDPKVGAGLPYWMPKGATIRRVVERYIVDKEVADGYEHVYTPVLMNV 298

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             ++ SGHW  YR +MF          D     L+PMNCP H+ ++ H ++SYRELP+R+
Sbjct: 299 DAYKTSGHWAHYRDDMFPPMDMG----DGEMLELRPMNCPSHIQIYKHHIRSYRELPIRI 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AE G ++R E SG+L GL RVR  T +D H F   +Q+  E  K+  LI+ +YKDF    
Sbjct: 355 AELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQIREEFAKVLKLIMDVYKDFDITD 414

Query: 423 IMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
              +LS R  K       +D +W+ +++++K  +D +       ++     GE AFYGPK
Sbjct: 415 YYFRLSYRDPKNTDKYYANDEMWEKSQSMLKAAMDDLG------LDYVEAEGEAAFYGPK 468

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +   K A+G D    TIQ+DF LP RF   YV    E+  PVMIHR + G++ERFI  +
Sbjct: 469 LDIQTKTALGNDETMSTIQLDFMLPERFGLTYVGQDGEEHRPVMIHRGIVGTMERFIAYL 528

Query: 539 IENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
            E +KG  P WL+P+QA +  +      EYA ++   L       E D RNE + YKIRE
Sbjct: 529 TEIYKGAFPTWLAPVQAEIIPVNEEAHGEYADKVRAELAKRGFRAEVDHRNEKLGYKIRE 588

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
              +K+P  ++ GD+E +   + +RR+G+      SL D I  +
Sbjct: 589 SQTQKVPYTLVLGDEEMNANGVNVRRYGTEEQISKSLDDFIAEI 632


>gi|331082613|ref|ZP_08331736.1| threonyl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA]
 gi|330400232|gb|EGG79874.1| threonyl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA]
          Length = 658

 Score =  573 bits (1477), Expect = e-161,   Method: Composition-based stats.
 Identities = 236/655 (36%), Positives = 360/655 (54%), Gaps = 20/655 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T  DGS K +    +  ++A  IS  LA+ A A  +NG+V DL   V  +  + I+T  
Sbjct: 3   ITLKDGSKKEYAESKSVYEIALDISEGLARAACAGEVNGEVVDLRTQVSEDCELNILTAN 62

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D + LA +RH+ +H++AEAV++++PE ++AIGP I+ GFYYDFD E  FS +EL  +EK+
Sbjct: 63  DEKGLAALRHTASHVLAEAVKNLYPEAKLAIGPSIDTGFYYDFDHE-SFSREELDALEKE 121

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M++II + +   +  +  E+A +  E K E YKVE+++ +P  E ++ Y QG++ DLC G
Sbjct: 122 MKKIIKKGAKIQRYTMPREEAIKFMEEKGEDYKVELIKDLPEGEEISFYSQGDFVDLCAG 181

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PH+ ST  VK F KL+  +GAYWRGD    MLSRIYGTA++ + EL +YL  LEE++KRD
Sbjct: 182 PHLMSTKGVKAF-KLISSSGAYWRGDEKNKMLSRIYGTAFSKKDELNEYLEQLEEAKKRD 240

Query: 246 HRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEINTPQVLDQ 302
           H KL REM LF      G G+     KG  + + L  ++     +   Y    TP +   
Sbjct: 241 HNKLGREMGLFTTVDVIGQGLPLLMPKGVIMLKELQRWIEDLEDNEWGYVRTKTPLMAKN 300

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            L++ SGHWD Y+  MF +    D  KD   FAL+PM CP    V+     SYRELP+R 
Sbjct: 301 DLYKISGHWDHYKEGMFVL---GDEEKDKEVFALRPMTCPFQYYVYKANQHSYRELPIRY 357

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            E  +++RNE SG +HGL RVR FT  + H+    +QM  E      L     +  G  +
Sbjct: 358 GETSTLFRNEDSGEMHGLTRVRQFTISEGHLIVRPDQMVEEFKGCLALAKHCLETLGVAE 417

Query: 423 IMVKL-----STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
            +            EK +G   +W++ E  ++ +L  +       +     +GE AFYGP
Sbjct: 418 DVTYHLSKWDPENKEKYIGEPEVWEETEGHIRNILTELG------VPFVEDVGEAAFYGP 471

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +   K+  G++    TIQ D  L  +F+ +Y++ + +K  P +IHR   G  ER +  
Sbjct: 472 KVDINAKNVYGKEDTMITIQWDALLAEQFDMYYIDENGDKKRPYIIHRTSMGCYERTLAW 531

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE + G  P WL P Q  V  I+    +YA E+   LK++ +    D R+E I YKIRE
Sbjct: 532 LIEKYAGLFPTWLCPEQVRVLPISEKYGDYANEVQKQLKANGIRSSVDNRSEKIGYKIRE 591

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
             ++K+P +++ G KE  ++ + +R        + +L + I  + KE    + +K
Sbjct: 592 ARLEKVPYMLVVGAKEEEDKVVSVRSRYLGDEGQKTLSEFIDAICKEIRTKEIRK 646


>gi|302550176|ref|ZP_07302518.1| threonyl-tRNA synthetase [Streptomyces viridochromogenes DSM 40736]
 gi|302467794|gb|EFL30887.1| threonyl-tRNA synthetase [Streptomyces viridochromogenes DSM 40736]
          Length = 658

 Score =  573 bits (1477), Expect = e-161,   Method: Composition-based stats.
 Identities = 267/664 (40%), Positives = 382/664 (57%), Gaps = 38/664 (5%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEI 61
           SD+++     S +   V  TG+  AE  +    +  +A  + G++ DLS  + EG  +E 
Sbjct: 2   SDVRVIIQRDSEREERVVTTGTTAAELFAGE--RSIIAARVAGELRDLSYTLAEGDEVEG 59

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +       L ++RHS AH+MA+AVQ ++PE ++ IGP ++DGFYYDFD E+PF+ ++L  
Sbjct: 60  VEISSEDGLNILRHSTAHVMAQAVQELFPEAKLGIGPPVKDGFYYDFDVEKPFTPEDLKA 119

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL------------ESIPAKE 169
           IEKKMQEI  R   F ++ ++ E ARE  E   E YK+E++            +      
Sbjct: 120 IEKKMQEIQKRGQKFARRAVTDEAARE--ELANEPYKLELIGLKGSASSDDGADVEVGAG 177

Query: 170 NVTLYRQGE-------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYG 222
            +T+Y   +       W DLCRGPH+ ST  +  F KLM+ A AYWRG    PML RIYG
Sbjct: 178 ELTIYDNLDAKTGELCWKDLCRGPHLPSTRAIPAF-KLMRNAAAYWRGSEKNPMLQRIYG 236

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLIS 281
           TAW T+ EL Q+L FL E+EKRDHRKL  E+DLF +  + GSG+  +H KG  I + +  
Sbjct: 237 TAWPTKDELKQHLEFLAEAEKRDHRKLGSELDLFSVPEQIGSGLAVFHPKGGIIRRVMED 296

Query: 282 YMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
           Y RR   ++ YE + TP      L++ SGH D Y   M+     D    +   + LKPMN
Sbjct: 297 YSRRRHEEEGYEFVYTPHATKGKLFETSGHLDWYADGMYPPMQLD----EGVDYYLKPMN 352

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
           CP H  +F+   +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDDAH++CT+EQM
Sbjct: 353 CPMHNLIFDARGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYCTREQM 412

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDTIKNSS 459
             E  K    ++ + +D+G     ++LST+  +  VGSD  W++A   ++ V +      
Sbjct: 413 AEELDKTLTFVLGLLRDYGLTDFYLELSTKDPEKFVGSDEAWEEATETLRQVAE------ 466

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
           +  +      G  AFYGPK     KDAIGR WQ  TIQ+DFNLP RF+  Y  +   K  
Sbjct: 467 KQGLPLVPDPGGAAFYGPKISVQTKDAIGRTWQMSTIQLDFNLPERFDLEYTGADGAKQR 526

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH 579
           PVMIHRA+FGSIERF  +++E++ G  P WL+P+QA+   I  + VEY ++ A   K   
Sbjct: 527 PVMIHRALFGSIERFFAVLLEHYAGAFPAWLAPVQAVGIPIGDAHVEYLEKFAAAAKRKG 586

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
           L +E D  ++ +  KIR    +K+P ++I GD++ S  S+  R    +    +   +AI 
Sbjct: 587 LRVEVDSSSDRMQKKIRNAQKQKVPFMVIAGDEDMSHGSVSFRYRDGSQENGIPFDEAIA 646

Query: 640 ILTK 643
            + K
Sbjct: 647 KIQK 650


>gi|254692865|ref|NP_082207.2| threonyl-tRNA synthetase, mitochondrial isoform 1 [Mus musculus]
 gi|118597388|sp|Q3UQ84|SYTM_MOUSE RecName: Full=Threonyl-tRNA synthetase, mitochondrial; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS; AltName:
           Full=Threonyl-tRNA synthetase-like 1; Flags: Precursor
 gi|74216488|dbj|BAE25159.1| unnamed protein product [Mus musculus]
 gi|187956085|gb|AAI47502.1| Threonyl-tRNA synthetase 2, mitochondrial (putative) [Mus musculus]
          Length = 723

 Score =  573 bits (1477), Expect = e-161,   Method: Composition-based stats.
 Identities = 229/667 (34%), Positives = 358/667 (53%), Gaps = 30/667 (4%)

Query: 5   IKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           IK++ P+G  +     + T   +A  IS +LA  AVA  +NG++ DL  P+  +  +  +
Sbjct: 66  IKISLPEGQKVDAVAWNTTPYQLAHQISVTLADTAVAAEVNGELYDLDRPLETDCHLRFL 125

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD--KEQPFSSDELA 120
           T + P   AV  HS AH++  A +       +  GP  E GFY+DF   KE+   S EL 
Sbjct: 126 TFDSPEGKAVFWHSSAHVLGAAAEQQL-GAVLCRGPSTESGFYHDFFLGKERTVRSAELP 184

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            +E+  QE+IA   PF +   S ++ R+LF+     +K+ ++E        T+Y  G   
Sbjct: 185 ILERICQELIAAAQPFRRLEASRDQLRQLFKDNH--FKLHLIEEKVTGPTATVYGCGMSV 242

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+R TGQ+    KL+  + A WR       L R+ G ++   + L  +    E 
Sbjct: 243 DLCRGPHLRHTGQIG-ALKLLTNSSALWRSLGAPETLQRVSGISFPKVELLRNWEARREA 301

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQV 299
           +E RDHR++ +E +LF   E   G  F+  +G +++  L++++R +  +  + E+ TP +
Sbjct: 302 AELRDHRRIGKEQELFFFHELSPGSCFFLPRGTRVYNALVAFIRAEYARRGFSEVKTPTL 361

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKD-----------LRTFALKPMNCPGHVAVF 348
               LW+QSGHW+ YRA+MF++K       D             T ALKPMNCP H  +F
Sbjct: 362 FSTKLWEQSGHWEHYRADMFSLKPPGTDGVDNSQSGHPARCPKDTLALKPMNCPAHCLMF 421

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
            H  +S+RELPVRLA+FG+++R E SGSL GL R+  F QDDAH+FC   Q+  E     
Sbjct: 422 AHRPRSWRELPVRLADFGALHRAEASGSLGGLTRLWRFQQDDAHIFCAPHQLEAEIQGCL 481

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
           + +  +Y   GF   +  LSTRP   +G   LWD AE +++  L+             + 
Sbjct: 482 DFLRCVYSVLGFSFHLA-LSTRPPGFLGEPRLWDQAEQVLQQALEKFGEPWD------LN 534

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
            G+GAFYGPK +  L DA+GR  QCGTIQ+DF LP RF+  Y         PV+IHRAV 
Sbjct: 535 PGDGAFYGPKIDVHLHDALGRPHQCGTIQLDFQLPLRFDLQYKGPAGTPECPVLIHRAVL 594

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FR 587
           GS+ER +G++ E+  G  PLWLSP+Q +V  + +   EYA+++   L++  L  + D   
Sbjct: 595 GSVERLLGVLAESCGGKWPLWLSPLQVVVIPVRTEQEEYARQVQQCLQAAGLVSDLDADS 654

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK--ES 645
             T++ ++R   +       + G +E S+R++ +R   +    +  L +++  L +   +
Sbjct: 655 GLTLSRRVRRAQLAHYNFQFVVGQREQSQRTVNVRTRDNRQLGERDLAESVQRLLELQNA 714

Query: 646 LPPDCQK 652
             P+ ++
Sbjct: 715 RVPNAEE 721


>gi|12847728|dbj|BAB27683.1| unnamed protein product [Mus musculus]
          Length = 723

 Score =  573 bits (1477), Expect = e-161,   Method: Composition-based stats.
 Identities = 229/667 (34%), Positives = 358/667 (53%), Gaps = 30/667 (4%)

Query: 5   IKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           IK++ P+G  +     + T   +A  IS +LA  AVA  +NG++ DL  P+  +  +  +
Sbjct: 66  IKISLPEGQKVDAVAWNTTPYQLAHQISVTLADTAVAAEVNGELYDLDRPLETDCHLRFL 125

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD--KEQPFSSDELA 120
           T + P   AV  HS AH++  A +       +  GP  E GFY+DF   KE+   S EL 
Sbjct: 126 TFDSPEGKAVFWHSSAHVLGAAAEQQL-GAVLCRGPSTESGFYHDFFLGKERTVRSAELP 184

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            +E+  QE+IA   PF +   S ++ R+LF+     +K+ ++E        T+Y  G   
Sbjct: 185 ILERICQELIAAAQPFRRLEASRDQLRQLFKDNH--FKLHLIEEKVTGPTATVYGCGMSV 242

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+R TGQ+    KL+  + A WR       L R+ G ++   + L  +    E 
Sbjct: 243 DLCRGPHLRHTGQIG-ALKLLTNSSALWRSLGAPETLQRVSGISFPKVELLRNWEARREA 301

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQV 299
           +E RDHR++ +E +LF   E   G  F+  +G +++  L++++R +  +  + E+ TP +
Sbjct: 302 AELRDHRRIGKEQELFFFHELSPGSCFFLPRGTRVYNALVAFIRAEYARRGFSEVKTPTL 361

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKD-----------LRTFALKPMNCPGHVAVF 348
               LW+QSGHW+ YRA+MF++K       D             T ALKPMNCP H  +F
Sbjct: 362 FSTKLWEQSGHWEHYRADMFSLKPPGTDGVDNSQSGHPARCPKDTLALKPMNCPAHCLMF 421

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
            H  +S+RELPVRLA+FG+++R E SGSL GL R+  F QDDAH+FC   Q+  E     
Sbjct: 422 AHRPRSWRELPVRLADFGALHRAEASGSLGGLTRLWRFQQDDAHIFCAPHQLEAEIQGCL 481

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
           + +  +Y   GF   +  LSTRP   +G   LWD AE +++  L+             + 
Sbjct: 482 DFLRCVYSVLGFSFHLA-LSTRPPGFLGEPRLWDQAEQVLQQALEKFGEPWD------LN 534

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
            G+GAFYGPK +  L DA+GR  QCGTIQ+DF LP RF+  Y         PV+IHRAV 
Sbjct: 535 PGDGAFYGPKIDVHLHDALGRPHQCGTIQLDFQLPLRFDLQYKGPAGTPECPVLIHRAVL 594

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FR 587
           GS+ER +G++ E+  G  PLWLSP+Q +V  + +   EYA+++   L++  L  + D   
Sbjct: 595 GSVERLLGVLAESCGGKWPLWLSPLQVVVIPVRTEQEEYARQVQQCLQAAGLVSDLDADS 654

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK--ES 645
             T++ ++R   +       + G +E S+R++ +R   +    +  L +++  L +   +
Sbjct: 655 GLTLSRRVRRAQLAHYNFQFVVGQREQSQRTVNVRTRDNRQLGERDLAESVQRLLELQNA 714

Query: 646 LPPDCQK 652
             P+ ++
Sbjct: 715 RVPNAEE 721


>gi|254391301|ref|ZP_05006505.1| threonyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|326440214|ref|ZP_08214948.1| threonyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|197704992|gb|EDY50804.1| threonyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
          Length = 658

 Score =  573 bits (1477), Expect = e-161,   Method: Composition-based stats.
 Identities = 261/664 (39%), Positives = 385/664 (57%), Gaps = 38/664 (5%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEI 61
           SD+++     S +   V  TG+  A+  +    +  VA  + G++ DL+  VR+G  +E 
Sbjct: 2   SDVRVIIQRDSEREERVVTTGTTAADLFAGE--RSVVAARVAGELKDLAYTVRDGEQVEP 59

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +       LA++RHS AH+MA+AVQ ++PE ++ IGP ++DGFYYDFD E+PF+ ++L  
Sbjct: 60  VEISSEDGLAILRHSTAHVMAQAVQELFPEAKLGIGPPVKDGFYYDFDVEKPFTPEDLKA 119

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIP------------AKE 169
           IEKKMQEI  R   F ++ +  ++ARE  E   E YK+E++                   
Sbjct: 120 IEKKMQEIQKRGQRFSRRVVGDDEARE--ELADEPYKLELIGLKGSASSEDGAAVEVGAG 177

Query: 170 NVTLYRQGE-------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYG 222
            +T+Y   +       W DLCRGPH+ ST  +  F KLM+ A AYWRG    PML RIYG
Sbjct: 178 ELTIYDNLDAKTGELCWKDLCRGPHLPSTRNIPAF-KLMRNAAAYWRGSEKNPMLQRIYG 236

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLIS 281
           TAW T+ EL QYL FL E+EKRDHR+L  E+DLF + ++ GSG+  +H +G  + + +  
Sbjct: 237 TAWPTKDELKQYLEFLAEAEKRDHRRLGSELDLFSVPDEIGSGLAVFHPRGGIVRRVMED 296

Query: 282 YMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
           Y R R  ++ YE + TP      L+++SGH D Y   M+     D        + LKPMN
Sbjct: 297 YSRKRHEEEGYEFVYTPHATKGTLFEKSGHLDWYAEGMYPPMQLDG----GTDYYLKPMN 352

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
           CP H  +F+   +SYRELP+RL EFG+VYR+E SG +HGL R RGFTQDDAH++CT+EQM
Sbjct: 353 CPMHNLIFDARGRSYRELPLRLFEFGTVYRHEKSGVVHGLTRARGFTQDDAHIYCTREQM 412

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDTIKNSS 459
             E  +    ++++ +D+G     ++LST+  +  VGSD  W++A  +++ V +      
Sbjct: 413 AEELDRTLTFVLNLLRDYGLTDFYLELSTKDPEKYVGSDETWEEATEVLRRVAE------ 466

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
           +  +      G  AFYGPK     +DAIGR WQ  TIQ+DFNLP RFN  Y      +  
Sbjct: 467 KQGLPLTPDPGGAAFYGPKISVQARDAIGRTWQMSTIQLDFNLPERFNLEYTAPDGSRQR 526

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH 579
           PVMIHRA+FGSIERF  +++E++ G +P WL+P+QA+   I  + +EY Q  A   K   
Sbjct: 527 PVMIHRALFGSIERFFAVLLEHYAGAMPPWLAPVQAVGIPIGDAHIEYLQSFAAEAKKRG 586

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
           L ++ D  ++ +  KIR H   K+P +II GD++ +  ++  R    +    +    A+ 
Sbjct: 587 LRVDVDASSDRMQKKIRNHQKLKVPFMIIVGDEDMNAGTVSFRYRDGSQENGIPRDAALA 646

Query: 640 ILTK 643
            L +
Sbjct: 647 KLEQ 650


>gi|288920333|ref|ZP_06414645.1| threonyl-tRNA synthetase [Frankia sp. EUN1f]
 gi|288348281|gb|EFC82546.1| threonyl-tRNA synthetase [Frankia sp. EUN1f]
          Length = 658

 Score =  573 bits (1477), Expect = e-161,   Method: Composition-based stats.
 Identities = 250/665 (37%), Positives = 380/665 (57%), Gaps = 44/665 (6%)

Query: 3   SDIKLTFPDGSI---KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI 59
           SD+++T   G     +      T +++ +       +  +A  + G+  DL+ P+  G +
Sbjct: 2   SDVRVTVQRGQQAEERVVRAGTTAAELFDG-----ERSVIAARVGGRQRDLAHPLAAGDV 56

Query: 60  -EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
            E IT + P   A++RHSCAH++A+AVQ ++P+ ++ IGP I+DGFYYDFD E+PF+ ++
Sbjct: 57  VEPITVDSPDGRAIVRHSCAHVVAQAVQDLFPKAKLGIGPPIQDGFYYDFDVERPFTPED 116

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL--ESIPAKE------- 169
           L  +EK+ QEII     F ++ ++ ++AR   E   E YK+E++  +S    +       
Sbjct: 117 LKAVEKRAQEIIKSGQRFSRRVVTDDEARA--ELADEPYKIELIGLKSSAGDDAEASVEV 174

Query: 170 ---NVTLYRQGE-------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSR 219
               +T+Y   +       W DLCRGPHV +T  +  F      A AYWRG    P L R
Sbjct: 175 GAGELTIYDNLDPKSGELCWKDLCRGPHVPTTRHIPAFAVQRS-AAAYWRGSERNPQLQR 233

Query: 220 IYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQT 278
           IYGTAW +++ L +Y + L E+EKRDHR+L  E+DLF    + G G+  +H KG  I   
Sbjct: 234 IYGTAWESREALKEYQHRLAEAEKRDHRRLGAELDLFSFPTEIGPGLAVFHPKGGAIRTV 293

Query: 279 LISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALK 337
           +  Y RR  I+  YE +NTP +    L++ SGH D +   M+     D        + LK
Sbjct: 294 MEDYSRRRHIEAGYEFVNTPHITKSDLYEISGHLDWFADGMYPPMQLDG----GADYYLK 349

Query: 338 PMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK 397
           PMNCP H+ +F    +SYRELP+RL EFG+VYR E SG +HGL RVRG TQDDAH+FC +
Sbjct: 350 PMNCPMHILIFRSRGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRVRGLTQDDAHLFCAR 409

Query: 398 EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR-VGSDALWDDAENIMKGVLDTIK 456
           EQ+  E   +   ++ + +D+G E   ++LSTRPE + +GSD  W +A  +++       
Sbjct: 410 EQLPEELDSVLKFVLGLLRDYGLEDFYLELSTRPEGKAIGSDEEWAEATELLREA----- 464

Query: 457 NSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE 516
            +S+  +   +  G GAFYGPK     KDAIGR WQ  TIQVDF LP RF+  Y  +   
Sbjct: 465 -ASKQDLELVMDEGGGAFYGPKISVQAKDAIGRTWQLSTIQVDFQLPQRFDMTYQAADGT 523

Query: 517 KCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLK 576
           +  P MIHRA+FG+IERF  I++E++ G LP WL+P+Q +   IT   V Y  ++A  L+
Sbjct: 524 RQRPFMIHRALFGTIERFFAILLEHYAGALPPWLAPVQVVGIPITDEHVPYLADVAAKLR 583

Query: 577 SHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
              + +E D  ++ +  KIR    +K+P +++ GD++ S+ ++  R    T    V + +
Sbjct: 584 ERGIRVEVDSSDDRMQKKIRTAQKQKVPFMLLAGDEDVSKGAVSFRFRDGTQRNGVPVDE 643

Query: 637 AIPIL 641
           A+  +
Sbjct: 644 AVAEI 648


>gi|73981325|ref|XP_850160.1| PREDICTED: similar to threonyl-tRNA synthetase-like 1 isoform 2
           [Canis familiaris]
          Length = 721

 Score =  573 bits (1476), Expect = e-161,   Method: Composition-based stats.
 Identities = 222/656 (33%), Positives = 351/656 (53%), Gaps = 28/656 (4%)

Query: 5   IKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           IK+T P G  +     + T   +A+ +S ++A   VA  +NG++ DL  P+  +  ++ +
Sbjct: 64  IKITLPGGQKVDAVAWNTTPYQLAQQMSSTVADTVVAAQVNGELYDLERPLETDSDLKFL 123

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD--KEQPFSSDELA 120
           T       AV  HS  H++  A + +     +  GP  E GFY+DF   KE+     EL 
Sbjct: 124 TFSSAEGKAVFWHSSTHVLGAAAEQLL-GAVLCRGPSTECGFYHDFFLGKERTVRGSELP 182

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            +E+  QE++A   PF +  +S ++ R+LF+     +K+ ++E        T+Y  G   
Sbjct: 183 ALEQICQELVAAAHPFRRLEVSQDQLRQLFK--DNPFKLRLIEEKVTGPTATVYGCGMLV 240

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+R TGQ+    KL+  + + WR       L R+ G ++ T +EL  +  +  E
Sbjct: 241 DLCRGPHLRHTGQIGGL-KLLTNSSSLWRSSGTPETLQRVSGISFPTVEELRAWEEWKGE 299

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQV 299
           +E RDHR++ +  +LF   E   G  F+  +G +++  L++++R +  +  + E+ TP +
Sbjct: 300 AELRDHRRIGKAQELFFFHELSPGSCFFLPRGTRVYNALVAFIRAEYTRRGFSEVKTPTL 359

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADD-----------TIKDLRTFALKPMNCPGHVAVF 348
               LW+ SGHW+ Y+ +MF ++               T     T ALKPMNCP H  +F
Sbjct: 360 FSAKLWELSGHWEHYQEDMFVLQPPGSDRLASSLSVCSTSHSTDTLALKPMNCPAHCLMF 419

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
            H  +S+RELP+RLA+FG ++R E SGSL GL R+R F QDDAH+FC  +Q+  E     
Sbjct: 420 AHRPRSWRELPLRLADFGVLHRAEASGSLGGLTRLRCFQQDDAHIFCAPDQLEEEIQGCL 479

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
           + + S+Y   GF   +  LSTRP   +G   LWD AE +++  L+             + 
Sbjct: 480 DFLRSVYAVLGFSFRLA-LSTRPSGFLGESCLWDQAEQVLQRALEEFGEPWD------LK 532

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
            G+GAFYGPK +  L DA+GR  QCGTIQ+DF LP RF+  Y         PV+IHRAV 
Sbjct: 533 PGDGAFYGPKIDVHLHDALGRPHQCGTIQLDFQLPLRFDLQYKGQAGVLERPVLIHRAVL 592

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FR 587
           GS+ER +G++ E++ G  PLWLSP Q +V  + +   EYA+E    L++  L  + D   
Sbjct: 593 GSVERMLGVLAESYGGKWPLWLSPFQVVVIPVGAEQEEYAREAQQRLQAAGLVCDLDADS 652

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             T++ ++R   +       + G KE S++++ IR   +    +  L +A+  L +
Sbjct: 653 GLTLSRRVRRAQLAHYNFQFVVGQKEQSKKTVNIRTRDNRQLGERDLTEAVQRLLE 708


>gi|114559271|ref|XP_001168925.1| PREDICTED: threonyl-tRNA synthetase-like 1 isoform 8 [Pan
           troglodytes]
          Length = 701

 Score =  573 bits (1476), Expect = e-161,   Method: Composition-based stats.
 Identities = 232/659 (35%), Positives = 353/659 (53%), Gaps = 25/659 (3%)

Query: 2   PSDIKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           P  IK++ P G  I     + T   +A  IS +LA  AVA  +NG+  DL  P+  +  +
Sbjct: 58  PRTIKISLPGGQKIDAVAWNTTPYQLARQISSTLADTAVAAQVNGEPYDLERPLETDSDL 117

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD--KEQPFSSD 117
             +T + P   AV  HS  H++  A +  +    +  GP  E GFY+DF   KE+     
Sbjct: 118 RFLTFDSPEGKAVFWHSSTHVLGAAAEQ-FLGAVLCRGPSTEYGFYHDFFLGKERTIRGS 176

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           EL  +E+  QE+ A   PF +   S ++ R+LF+     +K+ ++E        T+Y  G
Sbjct: 177 ELPVLERICQELTAAARPFRRLEASRDQLRQLFK--DNPFKLHLIEEKVTGPTATVYGCG 234

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
              DLC+GPH+R TGQ+     L   +  +    +    L R+ G ++ T + L  +  +
Sbjct: 235 TLVDLCQGPHLRHTGQIGGLKLLSNSSSLWRSSGAPET-LQRVSGISFPTTELLRAWEAW 293

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINT 296
            EE+E RDHR++ +E +LF   E   G  F+  +G +++  L++++R +     + E+ T
Sbjct: 294 REEAELRDHRRIGKEQELFFFHELSPGSCFFLPRGTRVYNALVAFIRAEYAHRGFSEVKT 353

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +    LW+QSGHW+ Y+ +MFAV+   DT       ALKPMNCP H  +F H  +S+R
Sbjct: 354 PTLFSTKLWEQSGHWEHYQEDMFAVQHITDT------LALKPMNCPAHCLMFAHRPRSWR 407

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ELP+RLA+FG+++R E SG L GL R+R F QDDAH+FCT +Q+  E     + + S+Y 
Sbjct: 408 ELPLRLADFGALHRAEASGGLGGLTRLRCFQQDDAHIFCTTDQLEAEIQSCLDFLRSVYA 467

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
             GF   +  LSTRP   +G   LWD AE ++K  L              +  G+GAFYG
Sbjct: 468 VLGFSFRLA-LSTRPSGFLGDPCLWDQAEQVLKQALKEFGEPWD------LNSGDGAFYG 520

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK +  L DA+GR  QCGTIQ+DF LP RF+  Y         PV+IHRAV GS+ER +G
Sbjct: 521 PKIDVHLHDALGRPHQCGTIQLDFQLPLRFDLQYKGQAGALERPVLIHRAVLGSVERLLG 580

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FRNETINYKI 595
           ++ E+  G  PLWLSP Q +V  + S   EYA+E    L++  L  + D     T++ +I
Sbjct: 581 VLAESCGGKWPLWLSPFQVVVIPVGSEQEEYAKEAQQSLRAAGLVSDLDADSGLTLSRRI 640

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK--ESLPPDCQK 652
           R   +       + G KE S+R++ IR   +    +  L +A+  L +   +  P+ ++
Sbjct: 641 RRAQLAHYNFQFVVGQKEQSKRTVNIRTRDNRRLGEWDLPEAVQRLVELQNTRVPNAEE 699


>gi|198425233|ref|XP_002123203.1| PREDICTED: similar to novel prtoein similar to vertebrate
           threonyl-tRNA synthetase (TARS, zgc:92586) [Ciona
           intestinalis]
          Length = 630

 Score =  573 bits (1476), Expect = e-161,   Method: Composition-based stats.
 Identities = 228/616 (37%), Positives = 348/616 (56%), Gaps = 23/616 (3%)

Query: 32  RSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWP 90
           + LA   +   +N  V DL  P+  +  ++++  +D  +  V  HS AHI+ EA++  + 
Sbjct: 5   QGLADNCIVAKVNDVVWDLDRPLETDAKLQLLKFDDEEAQTVYWHSTAHILGEAMERTYG 64

Query: 91  EVQVAIGPIIEDGFYYDF--DKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE 148
              +  GP IE GFYYD   D  Q    ++   +E  M+ I+    PF +  ++ E   +
Sbjct: 65  GC-LCYGPPIEQGFYYDMFMDGRQVSDKNDFPAVENVMKSILKEKQPFERLEVTKENLLK 123

Query: 149 LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYW 208
           +F      +K+ IL         T+YR G   DLCRGPHVR TG++K F    K +  YW
Sbjct: 124 MFAY--NPFKLRILNEKVTTPTTTVYRCGPLIDLCRGPHVRHTGKIKAFQL-YKNSATYW 180

Query: 209 RGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFW 268
            G ++   L RIYG ++  ++E+ Q+  F EE+++RDHRK+ +E +LF   E   G  F+
Sbjct: 181 EGKADMESLQRIYGISFPDKKEMKQWQKFQEEAKQRDHRKIGKEQELFFFHELSPGSCFF 240

Query: 269 HRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
             +G  I+ TLIS+++ + +   +EE+ +P + +  LW  SGHW  Y  NMF+       
Sbjct: 241 FPRGAFIYNTLISFIKEEYRKRGFEEVVSPNIYNSKLWMTSGHWQHYDQNMFSFSV---- 296

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
             +  TFALKPMNCPGH  +F+H  +S+RELP+R A+FG ++RNE SG+L GL RVR F 
Sbjct: 297 --EKETFALKPMNCPGHCLMFSHRSRSWRELPIRFADFGVLHRNELSGALTGLTRVRRFQ 354

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENI 447
           QDDAH+FC  EQ+ +E     N + ++Y  FGF    + LSTRPEK +G   +WDDAE  
Sbjct: 355 QDDAHIFCRPEQIKDEMRGALNFLKAVYDTFGF-SFKLFLSTRPEKFLGDPGMWDDAEKQ 413

Query: 448 MKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFN 507
           ++  L    +  +      +  G+GAFYGPK +  + DA+ R  QC TIQ+DF LP RFN
Sbjct: 414 LEECLVEFDHPWK------LNPGDGAFYGPKIDIQIMDALRRPHQCATIQLDFQLPIRFN 467

Query: 508 AFYVNSHS-EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVE 566
             YV     EK  PV+IHRA+ GS+ER I I+ EN+ G  PLWLSP Q ++  ++S   E
Sbjct: 468 LNYVTGEGDEKKRPVIIHRAILGSVERMIAILTENYGGKWPLWLSPRQVMILAVSSKYDE 527

Query: 567 YAQEIANLLKSHHLSIETD-FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
           YA+ +   +    + ++ +     T+N KIR   +++   I++ G+KE +  ++ IR   
Sbjct: 528 YAESVRLRMHEAGIQVDLEKDPGLTLNKKIRTAQLEQYNFILVVGEKEETNGTVNIRTRD 587

Query: 626 STTTQKVSLLDAIPIL 641
           +    ++++   I  L
Sbjct: 588 NKVHGELTVQAVIDRL 603


>gi|116495184|ref|YP_806918.1| threonyl-tRNA synthetase [Lactobacillus casei ATCC 334]
 gi|122263399|sp|Q037Z6|SYT_LACC3 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|116105334|gb|ABJ70476.1| Ser-tRNA(Thr) hydrolase [Lactobacillus casei ATCC 334]
          Length = 657

 Score =  573 bits (1476), Expect = e-161,   Method: Composition-based stats.
 Identities = 236/647 (36%), Positives = 366/647 (56%), Gaps = 24/647 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +TFPDG++K FP   T   + E IS SLAKKAVA  ++G +    +P+   G ++I+T +
Sbjct: 5   ITFPDGNVKQFPDGTTVKAITEGISNSLAKKAVAGKLDGDLIAYDEPIAHSGQLQIMTKD 64

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQIEK 124
           D   L V+R + A ++A A++ ++P++    G   EDGFYYD D+ +   S D+L  ++K
Sbjct: 65  DAEGLTVLRQTAAFVLAAALKDLYPDIHFGQGQATEDGFYYDTDRADGQVSVDDLPTVQK 124

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
           KM+ II  ++      LS  +A      K + +K +++E   A + +  Y+ G++ D   
Sbjct: 125 KMEAIIKENAALEPVVLSRAEA--FQAFKNDPFKKQLVE--AAGDPIKGYKLGDFVDFEE 180

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
              + S  +  K  KL+ VAGAYW+G S+ PML RIYGTA+ +++ L       +E+ + 
Sbjct: 181 KVLLPS-LKDLKHLKLLSVAGAYWQGKSSNPMLQRIYGTAYWSEKGLEDDAKRRQEAAEH 239

Query: 245 DHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQ 302
           DHR + R++DLF +      G+ +W   G  I + +  Y+  ++I D YE + TP + + 
Sbjct: 240 DHRVIGRDLDLFFVDPKVGAGLPYWMPNGATIRRVIERYIIDKEIADGYEHVYTPVLANL 299

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            L++ SGHWD YR +MF          D     L+PMNCP H+ ++NH ++SYRELP+R+
Sbjct: 300 DLYKTSGHWDHYREDMFPPMDMG----DGEMLELRPMNCPSHIQIYNHHIRSYRELPLRI 355

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AE G ++R E SG+L GL RVR  T +D H F   +Q+  E  KI  LI+ +Y+DF    
Sbjct: 356 AELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQVQEEFKKILRLIMDVYEDFNITD 415

Query: 423 IMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
              +LS R  K        D +W  +++++KG +D +K      ++     GE AFYGPK
Sbjct: 416 YSFRLSYRDPKNTEKYFDDDEMWTRSQSMLKGAMDDLK------LDYYEAEGEAAFYGPK 469

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +   K A+G D    TIQ+DF LP RFN  YV    E+  PVMIHR + G++ERFI  +
Sbjct: 470 LDIQTKTALGNDETMSTIQLDFMLPERFNLTYVGKDGEEHRPVMIHRGIVGTMERFIAYL 529

Query: 539 IENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
            E +KG  P WL+P QA++  + +   ++Y   I   +    L ++ D RNE + YKIRE
Sbjct: 530 TEIYKGAFPTWLAPTQAVLIPVNNDLHLDYVNRIKKQMLVAGLRVKVDDRNEKMGYKIRE 589

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
              KKIP  ++ GDKE ++ ++ +RR+G   T++ +    I  L  E
Sbjct: 590 AQTKKIPYTVVVGDKELNDAAVSVRRYGDEHTEEEAGNMFIDALVAE 636


>gi|332220153|ref|XP_003259222.1| PREDICTED: threonyl-tRNA synthetase, mitochondrial isoform 1
           [Nomascus leucogenys]
          Length = 718

 Score =  573 bits (1476), Expect = e-161,   Method: Composition-based stats.
 Identities = 232/670 (34%), Positives = 359/670 (53%), Gaps = 30/670 (4%)

Query: 2   PSDIKLTFP-DGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           P  IK++ P D  I     + T   +A  IS +LA  AVA  +NG+  DL  P+  +  +
Sbjct: 58  PRTIKISLPGDQKIDAVAWNTTPYQLARQISSTLADTAVAAQVNGEPYDLERPLETDSDL 117

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD--KEQPFSSD 117
             +T + P   AV  HS  H++  A +  +    +  GP  E GFY+DF   KE+     
Sbjct: 118 RFLTFDSPEGKAVFWHSSTHVLGAAAEQ-FLGAVLCRGPSTEYGFYHDFFLGKERTIRGS 176

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           EL  +E+  QE+ A   PF +   S ++ R+LF+     +K+ ++E        T+Y  G
Sbjct: 177 ELPVLERICQELTAAAQPFRRLEASRDQLRQLFK--DNPFKLHLIEERVTGPTATVYGCG 234

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
              DLC+GPH+R TGQ+     L   +  +    +    L R+ G ++ T + L  +  +
Sbjct: 235 TLVDLCQGPHLRHTGQIGGLKLLSNSSSLWRSSGAPET-LQRVSGISFPTTELLRAWEAW 293

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINT 296
            EE+E RDHR++ +E +LF   E   G  F+  +G +++  L++++R +  +  + E+ T
Sbjct: 294 REEAELRDHRRIGKEQELFFFHELSPGSCFFLPRGTRVYNALVAFIRAEYARRGFSEVKT 353

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCA----------DDTIKDLRT-FALKPMNCPGHV 345
           P +    LW+QSGHW+ Y+ +MFAV+            DD+ + +    ALKPMNCP H 
Sbjct: 354 PTLFSTKLWEQSGHWEHYQEDMFAVQPPGSDRPPSSQSDDSTRHITDTLALKPMNCPAHC 413

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +F H  +S+RELP+RLA+FG+++R E SGSL GL R+R F QDDAH+FCT +Q+  E  
Sbjct: 414 LMFAHRPRSWRELPLRLADFGALHRAEASGSLRGLTRLRCFQQDDAHIFCTTDQLEAEIQ 473

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
              + + S+Y   GF   +  LSTRP   +G   LWD AE ++K  L             
Sbjct: 474 SCLDFLRSVYAVLGFSFRLA-LSTRPSGFLGDPCLWDQAEQVLKQALKEFGEPWD----- 527

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
            +  G+GAFYGPK +  L DA+GR  QCGTIQ+DF LP RF+  Y         PV+IHR
Sbjct: 528 -LNSGDGAFYGPKIDVHLHDALGRPHQCGTIQLDFQLPLRFDLQYKGQAGALERPVLIHR 586

Query: 526 AVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD 585
           AV GS+ER +G++ E+  G  PLWLSP Q +V  + +   EYA+E    L++  L  + D
Sbjct: 587 AVLGSMERLLGVLAESCGGKWPLWLSPFQVVVIPVGTEQEEYAREAQQSLQAAGLVSDLD 646

Query: 586 -FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK- 643
                T++ +IR+  +       + G KE S+R++ IR   +    +  L +A+  L + 
Sbjct: 647 ADSGLTLSRRIRQAQLAHYNFQFVVGQKEQSKRTVNIRTRDNRRLGEWDLPEAVQRLVEL 706

Query: 644 -ESLPPDCQK 652
             +  P+ ++
Sbjct: 707 QNTRVPNAEE 716


>gi|329667761|gb|AEB93709.1| threonyl-tRNA synthetase [Lactobacillus johnsonii DPC 6026]
          Length = 643

 Score =  572 bits (1475), Expect = e-161,   Method: Composition-based stats.
 Identities = 223/644 (34%), Positives = 351/644 (54%), Gaps = 23/644 (3%)

Query: 6   KLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITP 64
            +T PDGS K+F    +  ++A SI+ SL K AV   ING +  L   V  +    IIT 
Sbjct: 4   SVTLPDGSKKDFDKAVSVKELASSIATSLGKAAVGAKINGVMKPLDYIVDEDVEAAIITD 63

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           +D   L ++R + A ++    +  +PE+++ +    E GF+ D DKE      EL ++EK
Sbjct: 64  KDEEGLDILRATAAFLLEAVAKRKYPELRLGMHEADEGGFFVDTDKEDQIKVTELPELEK 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
            MQ+ I          +   +  E+F+   + +K+++L+    ++ V +Y+ G++ D   
Sbjct: 124 AMQKAIKNGEKIEYTSMKKSELEEIFK--DDQFKLDLLKD--EEDEVAVYKLGDFVDFGF 179

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
              + +TG++K F KL+ VAGAYW G S+ PML RI+GTA+  +  L + L    E ++R
Sbjct: 180 DALLPNTGKIKNF-KLLSVAGAYWLGKSSNPMLQRIFGTAFFKKAALDEDLKRRAEIKER 238

Query: 245 DHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQ 302
           DHR + R++DLF +      G+ +W  KG  I + +  Y+  +++ D YE + TP +++ 
Sbjct: 239 DHRTIGRDLDLFFVDPKVGAGLPYWMPKGATIRRVVERYIVDKEVADGYEHVYTPVLMNV 298

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             ++ SGHW  YR +MF          D     L+PMNCP H+ ++ H ++SYRELP+R+
Sbjct: 299 DAYKTSGHWAHYRDDMFPPMDMG----DGEMLELRPMNCPSHIQIYKHHIRSYRELPIRI 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AE G ++R E SG+L GL RVR  T +D H F   +Q+  E  K+  LI+ +YKDF    
Sbjct: 355 AELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQIREEFAKVLKLIMDVYKDFDITD 414

Query: 423 IMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
              +LS R  K       +D +W+ +++++K  +D +       ++     GE AFYGPK
Sbjct: 415 YYFRLSYRDPKNTDKYYANDEMWETSQSMLKAAMDDLG------LDYVEAEGEAAFYGPK 468

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +   K A+G D    TIQ+DF LP RF   YV    E+  PVMIHR + G++ERFI  +
Sbjct: 469 LDIQTKTALGNDETMSTIQLDFMLPERFGLTYVGQDGEEHRPVMIHRGIVGTMERFIAYL 528

Query: 539 IENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
            E +KG  P WL+P+QA +  +      EYA ++   L       E D RNE + YKIRE
Sbjct: 529 TEIYKGAFPTWLAPVQAEIIPVNEEAHGEYADKVRAELAKRGFRAEVDHRNEKLGYKIRE 588

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
              +K+P  ++ GD+E +   + +RR+G+      SL D I  +
Sbjct: 589 SQTQKVPYTLVLGDEEMNANGVNVRRYGTEEQISKSLDDFIAEI 632


>gi|118586378|ref|ZP_01543828.1| threonyl-tRNA synthetase 1 [Oenococcus oeni ATCC BAA-1163]
 gi|118433195|gb|EAV39911.1| threonyl-tRNA synthetase 1 [Oenococcus oeni ATCC BAA-1163]
          Length = 663

 Score =  572 bits (1475), Expect = e-161,   Method: Composition-based stats.
 Identities = 230/659 (34%), Positives = 369/659 (55%), Gaps = 28/659 (4%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           M   IK+T PDG+ K    +    ++AESIS SLAKK+V   I+     +++ +R  G  
Sbjct: 1   MADLIKITMPDGTEKEVEQNTKPIEIAESISPSLAKKSVVAKIDDHFVGMNEGIRFSGKF 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK----EQPFS 115
            ++T  +  +L V+RHS  H++A+A++ + P++   +G  I +GFYYD D     E+  +
Sbjct: 61  RLVTKGEDEALKVLRHSTTHLLAQALRRLHPKIHFGVGVAIANGFYYDTDDSDESEKQVA 120

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           +DE  +IE +M++++  + P   Q +S ++A ++F    + YK+ ++   PA + +T+ +
Sbjct: 121 ADEFPKIEAEMKKLVQANIPIQHQIVSRKEALKIFAE--DPYKIALINDFPADQEITIVK 178

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
           QG++ DL RG  V STG +K F     VAGAYWRG S+  M+ RIYG +    + L    
Sbjct: 179 QGDYTDLDRGGLVPSTGWIKHFALT-SVAGAYWRGMSDNQMMQRIYGLSEWNPENLEAQK 237

Query: 236 YFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEE 293
             LEE ++RDHR + ++M+LF    + G+G+  W   G  I +T+  Y + ++ ++ Y  
Sbjct: 238 KALEERKERDHRTIGKQMELFFTNPEIGAGLPVWLPNGAAIRRTIEDYLVEKERQNGYMN 297

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           + TP V +  L+++SGHWD YR +MF       T  D     L+PMNCP H+ +F H  +
Sbjct: 298 VYTPVVSNLDLYKRSGHWDHYRDDMFPAM----TANDGEQLELRPMNCPSHIEIFEHEPR 353

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYR+LP R+AEFG ++R E SG+L GL RVR  T +D H     EQ+  E   I  LI  
Sbjct: 354 SYRDLPYRIAEFGQMHRWEKSGALTGLSRVREMTLNDGHTVVAPEQVEPEFKGILQLIRD 413

Query: 414 IYKDFGFEKIMVKL------STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGV 467
           +Y DFGF     +           +K    DA+W+ A+  +K  +D +       ++   
Sbjct: 414 VYHDFGFTDQDYRFRLSYRDPKNTKKYYDDDAMWEHAQAALKRAMDDMG------LDYFE 467

Query: 468 LLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAV 527
             GE AFYGPK +   K A+G +    TIQ+DF LP RF+  Y     +   PV+IHR V
Sbjct: 468 AEGEAAFYGPKLDIQFKTALGNEETMSTIQLDFLLPERFDMKYTGEDGKDHRPVLIHRGV 527

Query: 528 FGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITS-SAVEYAQEIANLLKSHHLSIETDF 586
            G++ERF+  +IE +KG  P WL+P+QA+V  +   +  +YA+ I + L      I+ D 
Sbjct: 528 VGTMERFVAFLIEKYKGQFPTWLAPVQAVVIPVNYGAHGDYARNIYSKLMKDGRRIKLDN 587

Query: 587 RNETINYKIREHSIK-KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R+E + Y IR+  +  K P I++ GD+E  + S+ +R  GS  T+++ + +   ++  +
Sbjct: 588 RDEKLGYLIRDAQVNLKTPYILVVGDQELRDNSVTVRFRGSDQTKEMKIDEFEEMINDD 646


>gi|326492063|dbj|BAJ98256.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326499331|dbj|BAK06156.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 667

 Score =  572 bits (1475), Expect = e-161,   Method: Composition-based stats.
 Identities = 264/591 (44%), Positives = 380/591 (64%), Gaps = 18/591 (3%)

Query: 56  EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFS 115
           E  + + T E   +L  IRH+CAH+MA AVQ ++P  +V IGP I++GFYYDFD E P +
Sbjct: 82  EARVVLPTNESSENLLRIRHTCAHVMAMAVQKLFPNSKVTIGPWIDNGFYYDFDME-PLT 140

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
             +L +I+K+M  II R+ P +++ +S E+A++  ++  E YK+EILE I   E +T+Y 
Sbjct: 141 DKDLKKIKKEMDRIIRRNLPLVREEVSREEAQKRIQALNEPYKLEILERIKE-EPITIYH 199

Query: 176 QGE-WFDLCRGPHVRSTGQVKK-FFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQ 233
            GE W+DLC GPHV STG++++   +L  VAGAYWRGD N  ML RIYGTAW ++ +L  
Sbjct: 200 IGEEWWDLCAGPHVESTGKIQRKAVELESVAGAYWRGDENNQMLQRIYGTAWESEDQLKA 259

Query: 234 YLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDY 291
           Y++F EE+++RDHR+L +++DLF I ED G G++FWH KG  I   L    ++  ++  Y
Sbjct: 260 YIHFKEEAKRRDHRRLGQDLDLFSIQEDAGGGLVFWHPKGAIIRHILEDSWKQTHLQRGY 319

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           + + TP V    LW+ SGH D Y+ NM+     +D       + L+PMNCP H+ V+   
Sbjct: 320 DLLYTPHVAKADLWKISGHIDFYKENMYNQMDVEDEP-----YQLRPMNCPYHILVYKRK 374

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI 411
           L+SYR+LP+R+AE G+VYR E SG+LHGL RVRGFTQDDAH+FC ++Q+ +E   + +L 
Sbjct: 375 LQSYRDLPIRVAELGTVYRYELSGALHGLFRVRGFTQDDAHIFCLEDQIKDEIRGVLDLT 434

Query: 412 ISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
             I   FGF    V LSTRPEK VGSD +W+ A   +K  LD             +  G 
Sbjct: 435 EEILGQFGFRNYEVNLSTRPEKSVGSDDIWEKATIALKDALDD------KGWGYTIDEGG 488

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
           GAFYGPK +  ++DA+GR WQC T+QVDFNLP RF+  YV+SH+EK  P+MIHRA+ GS+
Sbjct: 489 GAFYGPKIDLKIEDALGRKWQCSTVQVDFNLPERFDITYVDSHTEKKRPIMIHRAILGSL 548

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           ERF GI+IEN+ G+ PLWL+P QA +  +T++ ++Y  E+A+ LKS  +  E     E +
Sbjct: 549 ERFFGILIENYAGDFPLWLAPTQARILPVTNNELQYCNEVASELKSRGIRAEV-CHGERL 607

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
              IR    +K+P++ + G KE   R++ IR   +     + + + I  + 
Sbjct: 608 PKLIRNAETQKVPLMAVVGPKEVEARTLTIRSRHNGEMGTMPVDNFISKIQ 658


>gi|47220916|emb|CAG03123.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 822

 Score =  572 bits (1475), Expect = e-161,   Method: Composition-based stats.
 Identities = 236/690 (34%), Positives = 362/690 (52%), Gaps = 69/690 (10%)

Query: 5   IKLTFPDGS-IKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           I +  P G  +K      T   +A  +SRSLA++AV   + G++ DL  P+  + S+E +
Sbjct: 136 ISVELPGGRRLKGRAWITTPYQLACQVSRSLAQEAVVCRVGGQLWDLDRPLEQDCSLEFL 195

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF--DKEQPFSSDELA 120
             +   + AV  HS AH++ EA++  +    +  GP +E+GFYYD   D ++  SS EL 
Sbjct: 196 CFDHEDAQAVYWHSSAHVLGEAMERFYGGC-LCYGPPVENGFYYDMFLDGQRGVSSTELG 254

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            +E   + ++    PF +  +S E   E+F+  +  +K  IL+   +    T+YR G   
Sbjct: 255 DLEALCRTVMKEKQPFERLEVSKEALLEMFQYNQ--FKCRILKEKVSGATTTVYRCGPLI 312

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHVR TG++K   KL K + AYW G S+   L R+YG ++   + L ++  F EE
Sbjct: 313 DLCRGPHVRHTGRIK-ALKLYKSSSAYWEGRSDMETLQRVYGISFPDSKMLKEWERFQEE 371

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIF------------WH------------------- 269
           ++KRDHRK+ ++ +LF   +   G  F            W                    
Sbjct: 372 AKKRDHRKIGKDQELFFFHDLSPGSCFLPCPEERTSTTPWRSSSGLVSLTHIVCTMAAWP 431

Query: 270 ---------------RKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSY 314
                            G  +   +  +     +  ++E+ TP + ++ LW+ SGHW  Y
Sbjct: 432 TPACPSSGSLGPEVWPAGCGVADGVWLFQEEYWRRGFQEVATPNIYNRKLWETSGHWQHY 491

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
             NMF+    +D       FALKPMNCPGH  VF+   +S+RELP+RLA+FG ++RNE S
Sbjct: 492 GHNMFSFPVEED------VFALKPMNCPGHCLVFSQRPRSWRELPLRLADFGVLHRNELS 545

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
           G+L GL RVR F QDDAH+FCT EQ+ +E     + +  +YK FGF   +  LSTRPEK 
Sbjct: 546 GTLTGLTRVRRFQQDDAHIFCTVEQIESEMKGCLDFLRCVYKVFGFSFQLH-LSTRPEKF 604

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           +G  A+W+ AE  ++  L+      +      +  G+GAFYGPK +  ++DAIGR  QC 
Sbjct: 605 LGDIAVWNQAEKQLESSLNQFGEPWK------LNPGDGAFYGPKIDIKIQDAIGRYHQCA 658

Query: 495 TIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI 553
           T+Q+DF LP RFN  +V     ++  PV+IHRAV GS+ER + I+ EN+ G  PLWLSP 
Sbjct: 659 TVQLDFQLPLRFNLTFVGKDGDDRGQPVIIHRAVLGSVERMVAILTENYAGKWPLWLSPR 718

Query: 554 QAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FRNETINYKIREHSIKKIPIIIICGDK 612
           Q +V  +  +  +YA+++        L  + D      +N KIR   + +   I++ G+K
Sbjct: 719 QVMVVPVNPACEDYARKVCKQFTEAGLMADVDLDSGCLLNRKIRNAQLAQYNFILVVGEK 778

Query: 613 EASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           E    S+ +R   +    ++   + +  LT
Sbjct: 779 EKMTNSVNVRTRDNKVHGELPAAEVLARLT 808


>gi|42519522|ref|NP_965452.1| threonyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
 gi|73919800|sp|Q74IC0|SYT_LACJO RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|41583811|gb|AAS09418.1| threonyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
          Length = 643

 Score =  572 bits (1475), Expect = e-161,   Method: Composition-based stats.
 Identities = 223/644 (34%), Positives = 350/644 (54%), Gaps = 23/644 (3%)

Query: 6   KLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITP 64
            +T PDGS K+F    +  ++A SI+ SL K AV   ING +  L   V  +    IIT 
Sbjct: 4   SVTLPDGSKKDFDKAVSVKELASSIATSLGKAAVGAKINGVMKPLDYIVDEDVEAAIITD 63

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           +D   L ++R + A ++    +  +PE+++ +    E GF+ D DKE      EL  +EK
Sbjct: 64  KDEEGLDILRATAAFLLEAVAKRKYPELRLGMHEADEGGFFVDTDKEDQIKVTELPDLEK 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
            MQ+ I          +   +  E+F+   + +K+++L+    ++ V +Y+ G++ D   
Sbjct: 124 AMQKAIKNGEKIEYTSMKKSELEEIFK--DDQFKLDLLKD--EEDEVAVYKLGDFVDFGF 179

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
              + +TG++K F KL+ VAGAYW G S+ PML RI+GTA+  +  L + L    E ++R
Sbjct: 180 DALLPNTGKIKNF-KLLSVAGAYWLGKSSNPMLQRIFGTAFFKKAALDEDLKRRAEIKER 238

Query: 245 DHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQ 302
           DHR + R++DLF +      G+ +W  KG  I + +  Y+  +++ D YE + TP +++ 
Sbjct: 239 DHRTIGRDLDLFFVDPKVGAGLPYWMPKGATIRRVVERYIVDKEVADGYEHVYTPVLMNV 298

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             ++ SGHW  YR +MF          D     L+PMNCP H+ ++ H ++SYRELP+R+
Sbjct: 299 DAYKTSGHWAHYRDDMFPPMDMG----DGEMLELRPMNCPSHIQIYKHHIRSYRELPIRI 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AE G ++R E SG+L GL RVR  T +D H F   +Q+  E  K+  LI+ +YKDF    
Sbjct: 355 AELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQIREEFAKVLKLIMDVYKDFDITD 414

Query: 423 IMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
              +LS R  K       +D +W+ +++++K  +D +       ++     GE AFYGPK
Sbjct: 415 YYFRLSYRDPKNTDKYYANDEMWETSQSMLKAAMDDLG------LDYVEAEGEAAFYGPK 468

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +   K A+G D    TIQ+DF LP RF   YV    E+  PVMIHR + G++ERFI  +
Sbjct: 469 LDIQTKTALGNDETMSTIQLDFMLPERFGLTYVGQDGEEHRPVMIHRGIVGTMERFIAYL 528

Query: 539 IENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
            E +KG  P WL+P+QA +  +      EYA ++   L       E D RNE + YKIRE
Sbjct: 529 TEIYKGAFPTWLAPVQAEIIPVNEEAHGEYADKVRAELAKRGFRAEVDHRNEKLGYKIRE 588

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
              +K+P  ++ GD+E +   + +RR+G+      SL D I  +
Sbjct: 589 SQTQKVPYTLVLGDEEMNANGVNVRRYGTEEQISKSLDDFIAEI 632


>gi|116490538|ref|YP_810082.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Oenococcus oeni
           PSU-1]
 gi|116091263|gb|ABJ56417.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Oenococcus oeni
           PSU-1]
          Length = 663

 Score =  572 bits (1475), Expect = e-161,   Method: Composition-based stats.
 Identities = 231/659 (35%), Positives = 370/659 (56%), Gaps = 28/659 (4%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           M   IK+T PDG+ K    +    ++AESIS SLAKK+V   I+     +++ +R  G  
Sbjct: 1   MADLIKITMPDGTEKEVEQNTKPIEIAESISPSLAKKSVVAKIDDHFVGMNEGIRFSGKF 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK----EQPFS 115
            ++T  +  +L V+RHS  H++A+A++ + P++   +G  I +GFYYD D     E+  +
Sbjct: 61  RLVTKGEDEALKVLRHSTTHLLAQALRRLHPKIHFGVGVAIANGFYYDTDDSDESEKQVA 120

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           +DE  +IE +M++++  + P   Q +S ++A ++F    + YK+ ++   PA + +T+ +
Sbjct: 121 ADEFPKIEAEMKKLVQANIPIQHQIVSRKEALKIFAE--DPYKIALINDFPADQEITIVK 178

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
           QG++ DL RG  V STG +K F     VAGAYWRG S+  M+ RIYG +    + L    
Sbjct: 179 QGDYTDLDRGGLVPSTGWIKHFALT-SVAGAYWRGMSDNQMMQRIYGLSEWNPENLEAQK 237

Query: 236 YFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEE 293
             LEE ++RDHR + ++M+LF    + G+G+  W   G  I +T+  Y + ++ ++ Y  
Sbjct: 238 KALEERKERDHRTIGKQMELFFTNPEIGAGLPVWLPNGAAIRRTIEDYLVEKERQNGYMN 297

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           + TP V +  L+++SGHWD YR +MF    AD    D     L+PMNCP H+ +F H  +
Sbjct: 298 VYTPVVSNLDLYKRSGHWDHYRDDMFPAMTAD----DGEQLELRPMNCPSHIEIFEHEPR 353

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYR+LP R+AEFG ++R E SG+L GL RVR  T +D H     EQ+  E   I  LI  
Sbjct: 354 SYRDLPYRIAEFGQMHRWEKSGALTGLSRVREMTLNDGHTVVAPEQVEPEFKGILQLIRD 413

Query: 414 IYKDFGFEKIMVKL------STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGV 467
           +Y DFGF     +           +K    DA+W+ A+  +K  +D +       ++   
Sbjct: 414 VYHDFGFTDQDYRFRLSYRDPKNTKKYYDDDAMWEHAQAALKRAMDDMG------LDYFE 467

Query: 468 LLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAV 527
             GE AFYGPK +   K A+G +    TIQ+DF LP RF+  Y     +   PV+IHR V
Sbjct: 468 AEGEAAFYGPKLDIQFKTALGNEETMSTIQLDFLLPERFDMKYTGEDGKDHRPVLIHRGV 527

Query: 528 FGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITS-SAVEYAQEIANLLKSHHLSIETDF 586
            G++ERF+  +IE +KG  P WL+P+QA+V  +   +  +YA+ I + L      I+ D 
Sbjct: 528 VGTMERFVAFLIEKYKGQFPTWLAPVQAVVIPVNYGAHGDYARNIYSKLMKDGRRIKLDN 587

Query: 587 RNETINYKIREHSIK-KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R+E + Y IR+  +  K P I++ GD+E  + S+ +R  GS  T+++ + +   ++  +
Sbjct: 588 RDEKLGYLIRDAQVNLKTPYILVVGDQELRDNSVTVRFRGSDQTKEMKIDEFEEMINDD 646


>gi|296489553|gb|DAA31666.1| threonyl-tRNA synthetase, mitochondrial [Bos taurus]
          Length = 718

 Score =  572 bits (1474), Expect = e-161,   Method: Composition-based stats.
 Identities = 225/667 (33%), Positives = 354/667 (53%), Gaps = 30/667 (4%)

Query: 5   IKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           IK++ P G  +       T   +A+ IS +LA  AVA  +NG+  DL  P+  +  +  +
Sbjct: 61  IKISLPGGQKVDAVAWKTTPYQLAQQISSNLADTAVAAQVNGEPYDLERPLETDSDLRFL 120

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD--KEQPFSSDELA 120
           T +  +   V  HS  H++  A + +     +  GP  E GFY+DF   KE+     EL 
Sbjct: 121 TFDSAQGKKVFWHSSTHVLGAAAEQLL-GAVLCQGPSTECGFYHDFFLGKERTVKGSELP 179

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            +E+  QE+ A   PF +   S  + R+LF+     +K+ ++E        T+Y  G   
Sbjct: 180 VLERFCQELTAAAQPFRRLEASRAQLRQLFK--DNPFKLRLIEEKVTGPTATVYGCGMLV 237

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+R TGQ+     L   +  +   D+    L R+ G ++ T +EL  +  + EE
Sbjct: 238 DLCRGPHLRHTGQIGGLKLLSNSSSVWKFPDAPET-LQRVSGISFPTAEELRAWEEWREE 296

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQV 299
           +E RDHR++ +E +LF   E   G  F+  +G +++  L+++++ +  +  + E+ TP +
Sbjct: 297 AELRDHRRIGKEQELFFFHELSPGSCFFLPRGTRVYNALVAFIKAEYTRRGFSEVKTPTL 356

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCAD-----------DTIKDLRTFALKPMNCPGHVAVF 348
               LW+ SGHW+ YR +MFA++                     T ALKPMNCP H  +F
Sbjct: 357 FSAKLWELSGHWEHYREDMFALQPPGLDRPSSSQSDHSASPHTDTLALKPMNCPAHCLMF 416

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
            H  +S+RELP+RLA+FG+++R E SGSL GL R+R F QDDAH+FC  +Q+  E     
Sbjct: 417 AHRPRSWRELPLRLADFGALHRAEASGSLGGLTRLRCFQQDDAHIFCAPDQLEAEIRGCL 476

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
           + + S+Y   GF   M  LSTRP   +G   LWD AE +++  L+             + 
Sbjct: 477 DFLHSVYTILGFSFHMA-LSTRPSGFLGEPCLWDQAEQVLQQALEEFGAPWD------IS 529

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
            G+GAFYGPK +  ++DA+GR  QCGTIQ+DF LP RF+  Y         PV+IHRAV 
Sbjct: 530 PGDGAFYGPKIDVHVRDALGRPHQCGTIQLDFQLPLRFDLQYKGQLGALERPVLIHRAVL 589

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FR 587
           GS+ER +G++ E+  G  PLWLSP Q +V  + +   EYA+E    L++  L  + D   
Sbjct: 590 GSVERMLGVLAESCGGKWPLWLSPFQVVVIPVGTEQEEYAREAQQSLRAAGLVGDLDADS 649

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK--ES 645
             T++ +IR   +       + G +E S+R++ IR   +    +  L +A+  L +  ++
Sbjct: 650 GLTLSRRIRRAQLAHYNFQFVVGQREQSKRTVNIRTRDNRRLGERDLAEAVQRLLELQDT 709

Query: 646 LPPDCQK 652
             P+ ++
Sbjct: 710 RVPNAEE 716


>gi|301767961|ref|XP_002919352.1| PREDICTED: threonyl-tRNA synthetase, mitochondrial-like [Ailuropoda
           melanoleuca]
          Length = 718

 Score =  572 bits (1473), Expect = e-161,   Method: Composition-based stats.
 Identities = 226/667 (33%), Positives = 358/667 (53%), Gaps = 30/667 (4%)

Query: 5   IKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           IK++ P G  +     + T   +A+ IS +LA  AVA  +NG++ DL  P+  +  +  +
Sbjct: 61  IKISLPGGQKVDAVAWNTTPYQLAKHISSTLADMAVAAQVNGELYDLERPLETDSDLRFL 120

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD--KEQPFSSDELA 120
           T       AV  HS  H++  A + +     +  GP  E GFY+DF   KE+     EL 
Sbjct: 121 TFSSAEGKAVFWHSSTHVLGAAAEQLL-GAVLCRGPSTECGFYHDFFLGKERTVRGSELP 179

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            +E+  QE+ A   PF +  +S ++ R+LF+     +K+ +++        T+Y  G   
Sbjct: 180 ALERICQELAAAAQPFRRLEVSQDQLRQLFK--DNPFKLRLIKEKVTGPTATVYGCGMLV 237

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLC+GPH+R TGQ+    KL+  + + WR       L R+ G ++ T +EL  +  + EE
Sbjct: 238 DLCQGPHLRHTGQIGGL-KLLTNSSSLWRSSGASETLQRVSGISFPTAKELRAWEEWKEE 296

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQV 299
           +E RDHR++ +  +LF   E   G  F+  +G +++ TL++++R +  +  + E+ TP +
Sbjct: 297 AELRDHRRIGKAQELFFFHELSPGSCFFLPRGTRVYNTLVAFIRAEYTRRGFSEVKTPTL 356

Query: 300 LDQHLWQQSGHWDSYRANMFAVK-----------CADDTIKDLRTFALKPMNCPGHVAVF 348
               LW+ SGHW+ Y+ +MF ++               T     T ALKPMNCP H  +F
Sbjct: 357 FSAKLWELSGHWEHYQEDMFTLQPPGSDRLASSPSDHPTSHPTDTLALKPMNCPAHCLMF 416

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
            H  +S+RELP+RLA+FG+++R E SGSL GL R+R F QDDAH+FC  +Q+  E     
Sbjct: 417 AHRPRSWRELPLRLADFGALHRAEASGSLGGLTRLRCFQQDDAHIFCAPDQLEAEIRSCL 476

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
           + + S+Y   GF   +  LSTRP   +G   +WD AE +++  L+             + 
Sbjct: 477 DFLRSVYAVLGFSFRLA-LSTRPSGFLGEPCVWDQAEQVLQRALEEFGEPWD------LN 529

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
            G+GAFYGPK +  L+DA+GR  QCGTIQ+DF LP RF   Y         PV+IHRAV 
Sbjct: 530 PGDGAFYGPKIDVHLRDALGRPHQCGTIQLDFQLPLRFGLQYKGQAGVPERPVLIHRAVL 589

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR- 587
           GS+ER +G++ E+  G  PLWLSP Q +V  + +   EYA+E+   L++  L  + D   
Sbjct: 590 GSVERMLGVLAESCGGKWPLWLSPFQVVVIPVGTEQEEYAREVQQRLQAAGLVCDLDADL 649

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK--ES 645
             T++ ++R   +       + G KE S+R++ IR   +    +  L +A+  L +   +
Sbjct: 650 GLTLSRRVRRAQLTHYNFQFVVGQKEQSKRTVNIRTRDNHRLGERDLTEAVQRLLELQNT 709

Query: 646 LPPDCQK 652
             PD ++
Sbjct: 710 RVPDAEE 716


>gi|281352894|gb|EFB28478.1| hypothetical protein PANDA_008019 [Ailuropoda melanoleuca]
          Length = 718

 Score =  572 bits (1473), Expect = e-161,   Method: Composition-based stats.
 Identities = 226/667 (33%), Positives = 358/667 (53%), Gaps = 30/667 (4%)

Query: 5   IKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           IK++ P G  +     + T   +A+ IS +LA  AVA  +NG++ DL  P+  +  +  +
Sbjct: 61  IKISLPGGQKVDAVAWNTTPYQLAKHISSTLADMAVAAQVNGELYDLERPLETDSDLRFL 120

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD--KEQPFSSDELA 120
           T       AV  HS  H++  A + +     +  GP  E GFY+DF   KE+     EL 
Sbjct: 121 TFSSAEGKAVFWHSSTHVLGAAAEQLL-GAVLCRGPSTECGFYHDFFLGKERTVRGSELP 179

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            +E+  QE+ A   PF +  +S ++ R+LF+     +K+ +++        T+Y  G   
Sbjct: 180 ALERICQELAAAAQPFRRLEVSQDQLRQLFK--DNPFKLRLIKEKVTGPTATVYGCGMLV 237

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLC+GPH+R TGQ+    KL+  + + WR       L R+ G ++ T +EL  +  + EE
Sbjct: 238 DLCQGPHLRHTGQIGGL-KLLTNSSSLWRSSGASETLQRVSGISFPTAKELRAWEEWKEE 296

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQV 299
           +E RDHR++ +  +LF   E   G  F+  +G +++ TL++++R +  +  + E+ TP +
Sbjct: 297 AELRDHRRIGKAQELFFFHELSPGSCFFLPRGTRVYNTLVAFIRAEYTRRGFSEVKTPTL 356

Query: 300 LDQHLWQQSGHWDSYRANMFAVK-----------CADDTIKDLRTFALKPMNCPGHVAVF 348
               LW+ SGHW+ Y+ +MF ++               T     T ALKPMNCP H  +F
Sbjct: 357 FSAKLWELSGHWEHYQEDMFTLQPPGSDRLASSPSDHPTSHPTDTLALKPMNCPAHCLMF 416

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
            H  +S+RELP+RLA+FG+++R E SGSL GL R+R F QDDAH+FC  +Q+  E     
Sbjct: 417 AHRPRSWRELPLRLADFGALHRAEASGSLGGLTRLRCFQQDDAHIFCAPDQLEAEIRSCL 476

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
           + + S+Y   GF   +  LSTRP   +G   +WD AE +++  L+             + 
Sbjct: 477 DFLRSVYAVLGFSFRLA-LSTRPSGFLGEPCVWDQAEQVLQRALEEFGEPWD------LN 529

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
            G+GAFYGPK +  L+DA+GR  QCGTIQ+DF LP RF   Y         PV+IHRAV 
Sbjct: 530 PGDGAFYGPKIDVHLRDALGRPHQCGTIQLDFQLPLRFGLQYKGQAGVPERPVLIHRAVL 589

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR- 587
           GS+ER +G++ E+  G  PLWLSP Q +V  + +   EYA+E+   L++  L  + D   
Sbjct: 590 GSVERMLGVLAESCGGKWPLWLSPFQVVVIPVGTEQEEYAREVQQRLQAAGLVCDLDADL 649

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK--ES 645
             T++ ++R   +       + G KE S+R++ IR   +    +  L +A+  L +   +
Sbjct: 650 GLTLSRRVRRAQLTHYNFQFVVGQKEQSKRTVNIRTRDNHRLGERDLTEAVQRLLELQNT 709

Query: 646 LPPDCQK 652
             PD ++
Sbjct: 710 RVPDAEE 716


>gi|156120539|ref|NP_001095415.1| threonyl-tRNA synthetase, mitochondrial [Bos taurus]
 gi|152941102|gb|ABS44988.1| threonyl-tRNA synthetase-like 1 [Bos taurus]
          Length = 718

 Score =  571 bits (1472), Expect = e-160,   Method: Composition-based stats.
 Identities = 225/667 (33%), Positives = 353/667 (52%), Gaps = 30/667 (4%)

Query: 5   IKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           IK++ P G  +       T   +A+ IS +LA  AVA  +NG+  DL  P+  +  +  +
Sbjct: 61  IKISLPGGQKVDAVAWKTTPYQLAQQISSNLADTAVAAQVNGEPYDLERPLETDSDLRFL 120

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD--KEQPFSSDELA 120
           T +  +   V  HS  H++  A + +     +  GP  E GFY+DF   KE+     EL 
Sbjct: 121 TFDSAQGKKVFWHSSTHVLGAAAEQLL-GAVLCQGPSTECGFYHDFFLGKERTVKGSELP 179

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            +E+  QE+ A   PF +   S  + R+LF+      K+ ++E        T+Y  G   
Sbjct: 180 VLERFCQELTAAAQPFRRLEASRAQLRQLFK--DNPLKLRLIEEKVTGPTATVYGCGMLV 237

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+R TGQ+     L   +  +   D+    L R+ G ++ T +EL  +  + EE
Sbjct: 238 DLCRGPHLRHTGQIGGLKLLSNSSSVWKFPDAPET-LQRVSGISFPTAEELRAWEEWREE 296

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQV 299
           +E RDHR++ +E +LF   E   G  F+  +G +++  L+++++ +  +  + E+ TP +
Sbjct: 297 AELRDHRRIGKEQELFFFHELSPGSCFFLPRGTRVYNALVAFIKAEYTRRGFSEVKTPTL 356

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCAD-----------DTIKDLRTFALKPMNCPGHVAVF 348
               LW+ SGHW+ YR +MFA++                     T ALKPMNCP H  +F
Sbjct: 357 FSAKLWELSGHWEHYREDMFALQPPGLDRPSSSQSDHSASPHTDTLALKPMNCPAHCLMF 416

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
            H  +S+RELP+RLA+FG+++R E SGSL GL R+R F QDDAH+FC  +Q+  E     
Sbjct: 417 AHRPRSWRELPLRLADFGALHRAEASGSLGGLTRLRCFQQDDAHIFCAPDQLEAEIRGCL 476

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
           + + S+Y   GF   M  LSTRP   +G   LWD AE +++  L+             + 
Sbjct: 477 DFLHSVYTILGFSFHMA-LSTRPSGFLGEPCLWDQAEQVLQQALEEFGAPWD------IS 529

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
            G+GAFYGPK +  ++DA+GR  QCGTIQ+DF LP RF+  Y         PV+IHRAV 
Sbjct: 530 PGDGAFYGPKIDVHVRDALGRPHQCGTIQLDFQLPLRFDLQYKGQLGALERPVLIHRAVL 589

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FR 587
           GS+ER +G++ E+  G  PLWLSP Q +V  + +   EYA+E    L++  L  + D   
Sbjct: 590 GSVERMLGVLAESCGGKWPLWLSPFQVVVIPVGTEQEEYAREAQQSLRAAGLVGDLDADS 649

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK--ES 645
             T++ +IR   +       + G +E S+R++ IR   +    +  L +A+  L +  ++
Sbjct: 650 GLTLSRRIRRAQLAHYNFQFVVGQREQSKRTVNIRTRDNRRLGERDLAEAVQRLLELQDT 709

Query: 646 LPPDCQK 652
             P+ ++
Sbjct: 710 RVPNAEE 716


>gi|170016922|ref|YP_001727841.1| threonyl-tRNA synthetase [Leuconostoc citreum KM20]
 gi|238688955|sp|B1MXZ5|SYT_LEUCK RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|169803779|gb|ACA82397.1| Threonyl-tRNA synthetase [Leuconostoc citreum KM20]
          Length = 653

 Score =  571 bits (1472), Expect = e-160,   Method: Composition-based stats.
 Identities = 230/648 (35%), Positives = 372/648 (57%), Gaps = 26/648 (4%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           S+I LTFPDG++K FP   T   VAESIS+SLAKK+V+  ++G    + D +   G  ++
Sbjct: 2   SEISLTFPDGAVKVFPEGTTPLPVAESISKSLAKKSVSAKLHGAYVGMHDMIPASGDFQL 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSI--WPEVQVAIGPIIEDGFYYDFDKE--QPFSSD 117
           IT  D  +++++RH+ +H++A+A++ I  +  +   +GP I++GFYYD D       S +
Sbjct: 62  ITTSDDEAISLLRHAASHLLAQALKRIPKFANMHFGVGPFIDNGFYYDTDNGAGNQVSVE 121

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +  +IE  M +I+  D P + + ++ E+A  +F    + YK+ ++  +P  E +T+  QG
Sbjct: 122 DFPEIEAMMHKIVKEDLPIVSREITREEALSMFAE--DPYKIALISDLPEDEKITIAVQG 179

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           +  +L +G  V STG +K F KL  VAGAYWRG S+ PM+ RIYG A   Q ++   +  
Sbjct: 180 DHIELDKGGLVPSTGWIKHF-KLTSVAGAYWRGKSSNPMMQRIYGVAEWKQADVDAEIQR 238

Query: 238 LEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEIN 295
            EE+++RDHR + R+MDLF  +++ GSG+  W   G  I + +  Y+  +++ + Y+ + 
Sbjct: 239 REEAKERDHRTIGRDMDLFFTSQEVGSGLPVWLPNGATIRRQVERYIIDKELANGYQHVY 298

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP + + +L++ SGHWD YR +MF          +     L+PMNCP H+ VFNH  +SY
Sbjct: 299 TPVLSNLNLYKTSGHWDHYREDMFPPMDMG----EGEFLELRPMNCPSHIMVFNHKPRSY 354

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP+R+AE G ++R E SG+L GL RVR  T +D H F   E++  E   I  +++ +Y
Sbjct: 355 RELPIRIAELGMMHRYEKSGALTGLSRVREMTLNDGHTFVEPEKLEEEFKSILTMMMGVY 414

Query: 416 KDFGFEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
           +DF       +LS R      K    D +W+ ++  +K  +D +K      ++     GE
Sbjct: 415 RDFNITDYRFRLSYRDPENTEKYFDDDDMWEKSQAQLKRAMDDLK------LDYYEAEGE 468

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK-CHPVMIHRAVFGS 530
            AFYGPK +   K A+G +    TIQ+DF LP RFN  Y+ +  +    PVM+HR + G+
Sbjct: 469 AAFYGPKLDVQTKTALGSEETMSTIQLDFLLPERFNLTYIGADGQDNHRPVMLHRGIVGT 528

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNE 589
           +ERF   +IE +KG  P WLSP+Q  +  +   +  +YA +I   L++  L    + ++ 
Sbjct: 529 MERFTAYLIEMYKGAFPTWLSPLQVQIIPVNLGAHGDYANDIQAQLQAAGLRAHVETKDA 588

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
            + Y IRE    KIP  ++ GD E   +++ +R++G   T+ +   D 
Sbjct: 589 KMGYLIREAQTNKIPYTLVLGDSEVDGQTVTVRKYGEEKTRTMRFADF 636


>gi|300173545|ref|YP_003772711.1| threonyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811]
 gi|299887924|emb|CBL91892.1| Threonyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811]
          Length = 655

 Score =  571 bits (1472), Expect = e-160,   Method: Composition-based stats.
 Identities = 227/650 (34%), Positives = 375/650 (57%), Gaps = 27/650 (4%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSI 59
           M + + LTFPDG++K FP      +VA+SIS+SLAKK+V+  +N     ++D + E G+ 
Sbjct: 1   MSA-LNLTFPDGAVKVFPDGTKPIEVAQSISKSLAKKSVSAKLNDAYVGMNDILPESGNF 59

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSI--WPEVQVAIGPIIEDGFYYDFDKE--QPFS 115
           ++IT  D  +L+++RH+ +H++A+A++ +  +  +   +GP I++GFYYD D       S
Sbjct: 60  QLITTSDTEALSLLRHATSHLLAQALKRMPKFANMHFGVGPFIDNGFYYDTDNGAGNQVS 119

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            ++  +IE  M +I+  D P + + ++  +A E+F +  + YK+ ++  +P  E +T+  
Sbjct: 120 VEDFPEIEAMMHKIVKEDLPIISRQITRAEALEMFAA--DPYKLALITDLPEDEILTIAI 177

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
           QG+  +L +G  V STG +K F KL  VAGAYWRG S+ PM+ RIYG +   Q ++   +
Sbjct: 178 QGDHIELDKGGLVPSTGWIKHF-KLTSVAGAYWRGKSSNPMMQRIYGISEWKQADVDAEV 236

Query: 236 YFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEE 293
              EE+++RDHR + R++DLF  +++ GSG+  W   G  I + +  Y+  +++ + Y+ 
Sbjct: 237 TRREEAKERDHRTIGRDLDLFFTSQEVGSGLPVWLPNGATIRRQVERYITDKELANGYQH 296

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           + TP + + +L++ SGHWD YR +MF          D     L+PMNCP H+ VF H  +
Sbjct: 297 VYTPVLSNLNLYKTSGHWDHYREDMFPPMDMG----DGEFLELRPMNCPSHIMVFKHKPR 352

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYRELP+R+AE G ++R E SG+L GL RVR  T +D H F   E++  E   I  ++++
Sbjct: 353 SYRELPIRIAELGMMHRYEKSGALTGLSRVREMTLNDGHTFVEPEKIEEEFKSILTMMMA 412

Query: 414 IYKDFGFEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL 469
           +Y+DF       +LS R      K    D +W+ ++  +K  +D +K      ++     
Sbjct: 413 VYRDFNITDYRFRLSYRDPKNTEKYFDDDEMWEKSQAQLKSAMDDLK------LDYYEAE 466

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK-CHPVMIHRAVF 528
           GE AFYGPK +   K A+G +    TIQ+DF LP RF+  Y+ +  +    PVM+HR + 
Sbjct: 467 GEAAFYGPKLDVQTKTALGNEETMSTIQLDFLLPERFDLTYIGADGQDNHRPVMLHRGIV 526

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFR 587
           G++ERF   +IE +KG  P WLSP+Q  +  +   +  EYA  +   L++  L    + +
Sbjct: 527 GTMERFTAYLIEMYKGAFPTWLSPLQVQIIPVNLGAHGEYADGVQKKLQAVGLRANVETK 586

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
              + Y IRE    KIP  ++ GD E   +++ +R++G   TQ +S +D 
Sbjct: 587 EAKMGYLIREAQTNKIPYTLVLGDSEVDAQTVTVRKYGEEKTQTMSFIDF 636


>gi|239932385|ref|ZP_04689338.1| threonyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
          Length = 653

 Score =  571 bits (1472), Expect = e-160,   Method: Composition-based stats.
 Identities = 256/654 (39%), Positives = 382/654 (58%), Gaps = 38/654 (5%)

Query: 13  SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLA 71
           S +   V  TG+  AE  +    +  +A  + G++ DLS  +++G ++E +       L 
Sbjct: 7   SEREERVVTTGTTAAELFAGE--RSVIAARVAGELRDLSYELQDGETVEGVEISSEDGLN 64

Query: 72  VIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIA 131
           ++RHS AH+MA+AVQ ++PE ++ IGP ++DGFYYDFD ++PF  D+L  IEKKMQEI  
Sbjct: 65  ILRHSTAHVMAQAVQELFPEAKLGIGPPVKDGFYYDFDVDKPFHPDDLKAIEKKMQEIQK 124

Query: 132 RDSPFLKQYLSHEKARELFESKKEAYKVEIL------------ESIPAKENVTLYRQGE- 178
           R   F ++ ++ ++ARE  E   E YK+E++            +       +T+Y   + 
Sbjct: 125 RGQRFSRRVVTDDEARE--ELADEPYKLELIGLKGAASHDDGADVEVGAGELTIYDNLDA 182

Query: 179 ------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELT 232
                 W DLCRGPH+ +T  +  F KLM+ AGAYWRG    PML RIYGTAW +++EL 
Sbjct: 183 KTGELCWKDLCRGPHLPTTRNIPAF-KLMRNAGAYWRGSEKNPMLQRIYGTAWPSKEELK 241

Query: 233 QYLYFLEESEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYMRR-KIKDD 290
            +L FL E+EKRDHRKL  E+DLF I  + GSG+  +H KG  + + +  Y RR   ++ 
Sbjct: 242 AHLEFLAEAEKRDHRKLGHELDLFSIPEQIGSGLAVFHPKGGIVRRVMEDYSRRRHEEEG 301

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH 350
           YE + TP      L++ SGH D Y   M+     D    +   + LKPMNCP H  +F+ 
Sbjct: 302 YEFVYTPHATKGKLFETSGHLDWYADGMYPPMQLD----EGVDYYLKPMNCPMHNLIFDA 357

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
             +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDDAH++CT+EQM  E  K    
Sbjct: 358 RGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYCTREQMSEELDKTLTF 417

Query: 411 IISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL 469
           ++++ +D+G     ++LST+  +  VG+D  W++A   ++ V +      +  +      
Sbjct: 418 VLNLLRDYGLTDFYLELSTKDPEKFVGTDEAWEEATETLRQVAE------KQGLPLVPDP 471

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG 529
           G  AFYGPK     KDAIGR WQ  TIQ+DFNLP RF+  Y  +   K  PVMIHRA+FG
Sbjct: 472 GGAAFYGPKISVQAKDAIGRTWQMSTIQLDFNLPERFDLEYTAADGSKTRPVMIHRALFG 531

Query: 530 SIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE 589
           SIERF  +++E++ G  P WL+P+QA+   I  + VE+ ++ A   +   L +E D  ++
Sbjct: 532 SIERFFAVLLEHYAGAFPAWLAPVQAVGIPIGDAHVEHLEKFAAAARKQGLRVEVDSSSD 591

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +  KIR    +K+P ++I GD++ +  ++  R    +    + + +AI  + K
Sbjct: 592 RMQKKIRNAQKQKVPFMVIAGDEDMANGAVSFRYRDGSQENGIPVDEAIAKIVK 645


>gi|116630042|ref|YP_815214.1| threonyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323]
 gi|238853770|ref|ZP_04644136.1| threonine--tRNA ligase [Lactobacillus gasseri 202-4]
 gi|282851336|ref|ZP_06260701.1| threonine--tRNA ligase [Lactobacillus gasseri 224-1]
 gi|311110329|ref|ZP_07711726.1| threonine--tRNA ligase [Lactobacillus gasseri MV-22]
 gi|122273021|sp|Q041U6|SYT_LACGA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|116095624|gb|ABJ60776.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Lactobacillus
           gasseri ATCC 33323]
 gi|238833579|gb|EEQ25850.1| threonine--tRNA ligase [Lactobacillus gasseri 202-4]
 gi|282557304|gb|EFB62901.1| threonine--tRNA ligase [Lactobacillus gasseri 224-1]
 gi|311065483|gb|EFQ45823.1| threonine--tRNA ligase [Lactobacillus gasseri MV-22]
          Length = 643

 Score =  571 bits (1471), Expect = e-160,   Method: Composition-based stats.
 Identities = 222/644 (34%), Positives = 351/644 (54%), Gaps = 23/644 (3%)

Query: 6   KLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITP 64
            +T PDGS K+F    +  ++A SI+ SL K AV   ING++  L   V  +    IIT 
Sbjct: 4   SVTLPDGSKKDFDKAVSVKELASSIATSLGKAAVGAKINGEMKPLDYVVDEDVEAAIITD 63

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           +D   L ++R + A ++    +  +PE+++ +    E GF+ D DKE      EL ++EK
Sbjct: 64  KDEEGLNILRATAAFLLEAIAKRKYPELRLGMHEADEGGFFVDTDKEDQIKITELPELEK 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
           +MQ+ I          +   +  ++F+   + +K+++L+    K+ V +Y+ G++ D   
Sbjct: 124 EMQKAIKNGEKIEYTSMKKSELEDIFK--DDQFKLDLLKD--EKDEVAVYKLGDFVDFGF 179

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
              + +TG++K F KL+ VAGAYW G S+ PML RI+GTA+  +  L + L    E ++R
Sbjct: 180 EALLPNTGKIKNF-KLLSVAGAYWLGKSSNPMLQRIFGTAFFKKAALDEDLKRRAEIKER 238

Query: 245 DHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQ 302
           DHR + R++DLF +      G+ +W  KG  I + +  Y+  +++ D YE + TP +++ 
Sbjct: 239 DHRTIGRDLDLFFVDPKVGAGLPYWMPKGATIRRVVERYIVDKEVADGYEHVYTPVLMNV 298

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             ++ SGHW  YR +MF          D     L+PMNCP H+ ++ H ++SYRELP+R+
Sbjct: 299 DAYKTSGHWAHYRDDMFPPMDMG----DGEMLELRPMNCPSHIQIYKHHIRSYRELPIRI 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AE G ++R E SG+L GL RVR  T +D H F   +Q+  E  K+  LI+ +YKDF    
Sbjct: 355 AELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQIREEFAKVLKLIMDVYKDFDITD 414

Query: 423 IMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
              +LS R  K       +D +W+ +++++K  +D +       ++     GE AFYGPK
Sbjct: 415 YYFRLSYRDPKNTDKYYANDEMWEKSQSMLKAAMDDLG------LDYVEAEGEAAFYGPK 468

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +   K A+G D    TIQ+DF LP RF   YV    E+  PVMIHR + G++ERFI  +
Sbjct: 469 LDIQTKTALGNDETMSTIQLDFMLPERFGLTYVGQDGEEHRPVMIHRGIVGTMERFIAYL 528

Query: 539 IENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
            E +KG  P WL+P+QA +  +       YA ++   L       E D RNE + YKIRE
Sbjct: 529 TEIYKGAFPTWLAPVQAEIIPVNEEAHGAYADKVREELAKRGFRAEVDHRNEKLGYKIRE 588

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
              +K+P  ++ GD E +   + +RR+G+      SL D I  +
Sbjct: 589 SQTQKVPYTLVLGDDEMNANGVNVRRYGTEEQISKSLDDFIAEI 632


>gi|297195484|ref|ZP_06912882.1| threonyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC
           25486]
 gi|197722098|gb|EDY66006.1| threonyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 657

 Score =  571 bits (1471), Expect = e-160,   Method: Composition-based stats.
 Identities = 263/664 (39%), Positives = 379/664 (57%), Gaps = 39/664 (5%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEI 61
           SD+++     S +   V  TG+  A+       +  VA  + G++ DLS   ++G  +E 
Sbjct: 2   SDVRVIIQRDSEREERVVTTGTTAADLFPE---RTVVAARVGGELKDLSYEPKDGEEVEP 58

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +       L ++RHS AH+MA+AVQ ++PE ++ IGP ++DGFYYDFD E+PF  D+L  
Sbjct: 59  VEISSEDGLNILRHSTAHVMAQAVQELFPEAKLGIGPPVKDGFYYDFDVEKPFHPDDLKA 118

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL------------ESIPAKE 169
           IEKKMQEI  R   F ++ ++ E ARE  E   E YK+E++            +      
Sbjct: 119 IEKKMQEIQKRGQRFSRRVVTDEAARE--ELADEPYKLELIGLKGSASSDDGADVEVGAG 176

Query: 170 NVTLYRQGE-------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYG 222
            +T+Y   +       W DLCRGPH+ +T  +  F KLM+ A AYWRG    PML RIYG
Sbjct: 177 ELTIYDNLDAKTGELCWKDLCRGPHLPTTRNIPAF-KLMRNAAAYWRGSEKNPMLQRIYG 235

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLIS 281
           TAW +++EL  +L FL E+EKRDHRKL  E+DLF I  + GSG+  +H KG  I + +  
Sbjct: 236 TAWPSKEELKAHLEFLAEAEKRDHRKLGSELDLFSIPEQIGSGLAVFHPKGGIIRRVMED 295

Query: 282 YMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
           Y R R  ++ YE + TP      L++ SGH D Y   M+     D    +   + LKPMN
Sbjct: 296 YSRKRHEEEGYEFVYTPHATKGKLFETSGHLDWYADGMYPPMQLD----EGVDYYLKPMN 351

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
           CP H  +F+   +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDDAH++CTKEQM
Sbjct: 352 CPMHNLIFDARGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYCTKEQM 411

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDTIKNSS 459
            +E       ++++ +D+G     ++LST+  +  VGSD +W++A   ++ V +      
Sbjct: 412 ADELDSTLTFVLNLLRDYGLTDFYLELSTKDPEKFVGSDEVWEEATETLRQVAE------ 465

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
           +  +      G  AFYGPK     KDAIGR WQ  T+Q+DFNLP RF+  Y      K  
Sbjct: 466 KQGLPLVPDPGGAAFYGPKISVQAKDAIGRTWQMSTVQLDFNLPERFDLEYTGPDGTKHR 525

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH 579
           PVMIHRA+FGSIERF  +++E++ G +P WL+P+QA+   I  + VEY Q+ A   K   
Sbjct: 526 PVMIHRALFGSIERFFAVLLEHYAGAMPPWLAPVQAVGIPIGDAHVEYLQDFAADAKKKG 585

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
           L +E D  ++ +  KIR     K+P +II GD + +  ++  R    +    +   DA+ 
Sbjct: 586 LRVEVDSSSDRMQKKIRNQQKLKVPFMIIVGDDDMNAGTVSFRYRDGSQENGIPREDALA 645

Query: 640 ILTK 643
            +  
Sbjct: 646 KIAD 649


>gi|300361194|ref|ZP_07057371.1| threonine--tRNA ligase [Lactobacillus gasseri JV-V03]
 gi|300353813|gb|EFJ69684.1| threonine--tRNA ligase [Lactobacillus gasseri JV-V03]
          Length = 643

 Score =  570 bits (1470), Expect = e-160,   Method: Composition-based stats.
 Identities = 222/644 (34%), Positives = 351/644 (54%), Gaps = 23/644 (3%)

Query: 6   KLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITP 64
            +T PDGS K+F    +  ++A SI+ SL K AV   ING++  L   V  +    IIT 
Sbjct: 4   SVTLPDGSKKDFDKAVSVKELASSIATSLGKAAVGAKINGEMKPLDYVVDEDVEAAIITD 63

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           +D   L ++R + A ++    +  +PE+++ +    E GF+ D DKE      EL ++EK
Sbjct: 64  KDEEGLDILRATAAFLLEAIAKRKYPELRLGMHEADEGGFFVDTDKEDQIKITELPELEK 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
           +MQ+ I          +   +  ++F+   + +K+++L+    K+ V +Y+ G++ D   
Sbjct: 124 EMQKAIKNGEKIEYTSMKKSELEDIFK--DDQFKLDLLKD--EKDEVAVYKLGDFVDFGF 179

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
              + +TG++K F KL+ VAGAYW G S+ PML RI+GTA+  +  L + L    E ++R
Sbjct: 180 EALLPNTGKIKNF-KLLSVAGAYWLGKSSNPMLQRIFGTAFFKKAALDEDLKRRAEIKER 238

Query: 245 DHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQ 302
           DHR + R++DLF +      G+ +W  KG  I + +  Y+  +++ D YE + TP +++ 
Sbjct: 239 DHRTIGRDLDLFFVDPKVGAGLPYWMPKGATIRRVVERYIVDKEVADGYEHVYTPVLMNV 298

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             ++ SGHW  YR +MF          D     L+PMNCP H+ ++ H ++SYRELP+R+
Sbjct: 299 DAYKTSGHWAHYRDDMFPPMDMG----DGEMLELRPMNCPSHIQIYKHHIRSYRELPIRI 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AE G ++R E SG+L GL RVR  T +D H F   +Q+  E  K+  LI+ +YKDF    
Sbjct: 355 AELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQIREEFAKVLKLIMDVYKDFDITD 414

Query: 423 IMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
              +LS R  K       +D +W+ +++++K  +D +       ++     GE AFYGPK
Sbjct: 415 YYFRLSYRDPKNTDKYYANDEMWEKSQSMLKAAMDDLG------LDYVEAEGEAAFYGPK 468

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +   K A+G D    TIQ+DF LP RF   YV    E+  PVMIHR + G++ERFI  +
Sbjct: 469 LDIQTKTALGNDETMSTIQLDFMLPERFGLTYVGQDGEEHRPVMIHRGIVGTMERFIAYL 528

Query: 539 IENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
            E +KG  P WL+P+QA +  +       YA ++   L       E D RNE + YKIRE
Sbjct: 529 TEIYKGAFPTWLAPVQAEIIPVNEEAHGAYADKVREELAKRGFRAEVDHRNEKLGYKIRE 588

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
              +K+P  ++ GD E +   + +RR+G+      SL D I  +
Sbjct: 589 SQTQKVPYTLVLGDDEMNANGVNVRRYGTEEQISKSLDDFIAEI 632


>gi|62897187|dbj|BAD96534.1| threonyl-tRNA synthetase-like 1 variant [Homo sapiens]
          Length = 718

 Score =  570 bits (1470), Expect = e-160,   Method: Composition-based stats.
 Identities = 232/670 (34%), Positives = 355/670 (52%), Gaps = 30/670 (4%)

Query: 2   PSDIKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           P  IK++ P G  I     + T   +A  IS +LA  AVA  +NG+  DL  P+  +  +
Sbjct: 58  PRTIKISLPGGQKIDAVAWNTTPYQLARQISSTLADTAVAAQVNGEPYDLERPLETDSDL 117

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD--KEQPFSSD 117
             +T + P   AV  HS  H++  A +  +    +  GP  E GFY+DF   KE+     
Sbjct: 118 RFLTFDSPEGKAVFWHSSTHVLGAAAEQ-FLGAVLCRGPSTEYGFYHDFFLGKERTIRGS 176

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           EL  +E+  QE+ A   PF +   S ++ R+LF+     +K+ ++E        T+Y  G
Sbjct: 177 ELPVLERICQELTAAARPFRRLEASRDQLRQLFK--DNPFKLHLIEEKVTGPTATVYGCG 234

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
              DLC+GPH+R TGQ+     L   +  +         L R+ G ++ T + L  +  +
Sbjct: 235 TLVDLCQGPHLRHTGQIGGLKLLSNSSSLWRSS-GPPETLQRVSGISFPTTELLRVWEAW 293

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINT 296
            EE+E RDHR++ +E +LF   E   G  F+  +G +++  L++++R +     + E+ T
Sbjct: 294 REEAELRDHRRIGKEQELFFFHELSPGSCFFLPRGTRVYNALVAFIRAEYAHRGFSEVKT 353

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCA----------DDTIKDLRT-FALKPMNCPGHV 345
           P +    LW+QSGHW+ Y+ +MFAV+            DD+ + +    ALKPMNCP H 
Sbjct: 354 PTLFSTKLWEQSGHWEHYQEDMFAVQPPGSDRPPSSQSDDSTRHITDTLALKPMNCPAHC 413

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +F H  +S+RELP+RLA+FG+++R E SG L GL R+R F QDDAH+FCT +Q+  E  
Sbjct: 414 LMFAHRPRSWRELPLRLADFGALHRAEASGGLGGLTRLRCFQQDDAHIFCTTDQLEAEIQ 473

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
              + + S+Y   GF   +  LSTRP   +G   LWD AE ++K  L             
Sbjct: 474 SCLDFLRSVYAVLGFSFRLA-LSTRPSGFLGDPCLWDQAEQVLKQALKEFGEPWD----- 527

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
            +  G+GAFYGPK +  L DA+GR  QCGTIQ+DF LP RF+  Y         PV+IHR
Sbjct: 528 -LNSGDGAFYGPKIDVHLHDALGRPHQCGTIQLDFQLPLRFDLQYKGQAGALGRPVLIHR 586

Query: 526 AVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD 585
           AV GS+ER +G++ E+  G  PLWLSP Q +V  + S   EYA+E    L++  L  + D
Sbjct: 587 AVLGSVERLLGVLAESCGGKWPLWLSPFQVVVIPVGSEQEEYAKEAQQSLRAAGLVSDLD 646

Query: 586 -FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK- 643
                T++ +IR   +       + G KE S+R++ IR   +    +  L +A+  L + 
Sbjct: 647 ADSGLTLSRRIRRAQLAHYNFQFVVGQKEQSKRTVNIRTRDNRRLGEWDLPEAVQRLVEL 706

Query: 644 -ESLPPDCQK 652
             +  P+ ++
Sbjct: 707 QNTRVPNAEE 716


>gi|114559283|ref|XP_001168777.1| PREDICTED: threonyl-tRNA synthetase-like 1 isoform 3 [Pan
           troglodytes]
          Length = 666

 Score =  570 bits (1469), Expect = e-160,   Method: Composition-based stats.
 Identities = 232/670 (34%), Positives = 356/670 (53%), Gaps = 30/670 (4%)

Query: 2   PSDIKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           P  IK++ P G  I     + T   +A  IS +LA  AVA  +NG+  DL  P+  +  +
Sbjct: 6   PRTIKISLPGGQKIDAVAWNTTPYQLARQISSTLADTAVAAQVNGEPYDLERPLETDSDL 65

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD--KEQPFSSD 117
             +T + P   AV  HS  H++  A +  +    +  GP  E GFY+DF   KE+     
Sbjct: 66  RFLTFDSPEGKAVFWHSSTHVLGAAAEQ-FLGAVLCRGPSTEYGFYHDFFLGKERTIRGS 124

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           EL  +E+  QE+ A   PF +   S ++ R+LF+     +K+ ++E        T+Y  G
Sbjct: 125 ELPVLERICQELTAAARPFRRLEASRDQLRQLFK--DNPFKLHLIEEKVTGPTATVYGCG 182

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
              DLC+GPH+R TGQ+     L   +  +    +    L R+ G ++ T + L  +  +
Sbjct: 183 TLVDLCQGPHLRHTGQIGGLKLLSNSSSLWRSSGAPET-LQRVSGISFPTTELLRAWEAW 241

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINT 296
            EE+E RDHR++ +E +LF   E   G  F+  +G +++  L++++R +     + E+ T
Sbjct: 242 REEAELRDHRRIGKEQELFFFHELSPGSCFFLPRGTRVYNALVAFIRAEYAHRGFSEVKT 301

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCA----------DDTIKDLRT-FALKPMNCPGHV 345
           P +    LW+QSGHW+ Y+ +MFAV+            DD+ + +    ALKPMNCP H 
Sbjct: 302 PTLFSTKLWEQSGHWEHYQEDMFAVQPPGSDRPPSSQSDDSTRHITDTLALKPMNCPAHC 361

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +F H  +S+RELP+RLA+FG+++R E SG L GL R+R F QDDAH+FCT +Q+  E  
Sbjct: 362 LMFAHRPRSWRELPLRLADFGALHRAEASGGLGGLTRLRCFQQDDAHIFCTTDQLEAEIQ 421

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
              + + S+Y   GF   +  LSTRP   +G   LWD AE ++K  L             
Sbjct: 422 SCLDFLRSVYAVLGFSFRLA-LSTRPSGFLGDPCLWDQAEQVLKQALKEFGEPWD----- 475

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
            +  G+GAFYGPK +  L DA+GR  QCGTIQ+DF LP RF+  Y         PV+IHR
Sbjct: 476 -LNSGDGAFYGPKIDVHLHDALGRPHQCGTIQLDFQLPLRFDLQYKGQAGALERPVLIHR 534

Query: 526 AVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD 585
           AV GS+ER +G++ E+  G  PLWLSP Q +V  + S   EYA+E    L++  L  + D
Sbjct: 535 AVLGSVERLLGVLAESCGGKWPLWLSPFQVVVIPVGSEQEEYAKEAQQSLRAAGLVSDLD 594

Query: 586 -FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK- 643
                T++ +IR   +       + G KE S+R++ IR   +    +  L +A+  L + 
Sbjct: 595 ADSGLTLSRRIRRAQLAHYNFQFVVGQKEQSKRTVNIRTRDNRRLGEWDLPEAVQRLVEL 654

Query: 644 -ESLPPDCQK 652
             +  P+ ++
Sbjct: 655 QNTRVPNAEE 664


>gi|114559269|ref|XP_001168944.1| PREDICTED: threonyl-tRNA synthetase, mitochondrial isoform 9 [Pan
           troglodytes]
          Length = 718

 Score =  570 bits (1469), Expect = e-160,   Method: Composition-based stats.
 Identities = 232/670 (34%), Positives = 356/670 (53%), Gaps = 30/670 (4%)

Query: 2   PSDIKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           P  IK++ P G  I     + T   +A  IS +LA  AVA  +NG+  DL  P+  +  +
Sbjct: 58  PRTIKISLPGGQKIDAVAWNTTPYQLARQISSTLADTAVAAQVNGEPYDLERPLETDSDL 117

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD--KEQPFSSD 117
             +T + P   AV  HS  H++  A +  +    +  GP  E GFY+DF   KE+     
Sbjct: 118 RFLTFDSPEGKAVFWHSSTHVLGAAAEQ-FLGAVLCRGPSTEYGFYHDFFLGKERTIRGS 176

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           EL  +E+  QE+ A   PF +   S ++ R+LF+     +K+ ++E        T+Y  G
Sbjct: 177 ELPVLERICQELTAAARPFRRLEASRDQLRQLFK--DNPFKLHLIEEKVTGPTATVYGCG 234

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
              DLC+GPH+R TGQ+     L   +  +    +    L R+ G ++ T + L  +  +
Sbjct: 235 TLVDLCQGPHLRHTGQIGGLKLLSNSSSLWRSSGAPET-LQRVSGISFPTTELLRAWEAW 293

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINT 296
            EE+E RDHR++ +E +LF   E   G  F+  +G +++  L++++R +     + E+ T
Sbjct: 294 REEAELRDHRRIGKEQELFFFHELSPGSCFFLPRGTRVYNALVAFIRAEYAHRGFSEVKT 353

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCA----------DDTIKDLRT-FALKPMNCPGHV 345
           P +    LW+QSGHW+ Y+ +MFAV+            DD+ + +    ALKPMNCP H 
Sbjct: 354 PTLFSTKLWEQSGHWEHYQEDMFAVQPPGSDRPPSSQSDDSTRHITDTLALKPMNCPAHC 413

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +F H  +S+RELP+RLA+FG+++R E SG L GL R+R F QDDAH+FCT +Q+  E  
Sbjct: 414 LMFAHRPRSWRELPLRLADFGALHRAEASGGLGGLTRLRCFQQDDAHIFCTTDQLEAEIQ 473

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
              + + S+Y   GF   +  LSTRP   +G   LWD AE ++K  L             
Sbjct: 474 SCLDFLRSVYAVLGFSFRLA-LSTRPSGFLGDPCLWDQAEQVLKQALKEFGEPWD----- 527

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
            +  G+GAFYGPK +  L DA+GR  QCGTIQ+DF LP RF+  Y         PV+IHR
Sbjct: 528 -LNSGDGAFYGPKIDVHLHDALGRPHQCGTIQLDFQLPLRFDLQYKGQAGALERPVLIHR 586

Query: 526 AVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD 585
           AV GS+ER +G++ E+  G  PLWLSP Q +V  + S   EYA+E    L++  L  + D
Sbjct: 587 AVLGSVERLLGVLAESCGGKWPLWLSPFQVVVIPVGSEQEEYAKEAQQSLRAAGLVSDLD 646

Query: 586 -FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK- 643
                T++ +IR   +       + G KE S+R++ IR   +    +  L +A+  L + 
Sbjct: 647 ADSGLTLSRRIRRAQLAHYNFQFVVGQKEQSKRTVNIRTRDNRRLGEWDLPEAVQRLVEL 706

Query: 644 -ESLPPDCQK 652
             +  P+ ++
Sbjct: 707 QNTRVPNAEE 716


>gi|20070344|ref|NP_079426.2| threonyl-tRNA synthetase, mitochondrial precursor [Homo sapiens]
 gi|74752395|sp|Q9BW92|SYTM_HUMAN RecName: Full=Threonyl-tRNA synthetase, mitochondrial; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS; AltName:
           Full=Threonyl-tRNA synthetase-like 1; Flags: Precursor
 gi|12802990|gb|AAH00541.1| Threonyl-tRNA synthetase 2, mitochondrial (putative) [Homo sapiens]
 gi|14603040|gb|AAH09997.1| Threonyl-tRNA synthetase 2, mitochondrial (putative) [Homo sapiens]
 gi|55958996|emb|CAI15488.1| threonyl-tRNA synthetase 2, mitochondrial (putative) [Homo sapiens]
 gi|119573933|gb|EAW53548.1| threonyl-tRNA synthetase-like 1, isoform CRA_a [Homo sapiens]
 gi|168275836|dbj|BAG10638.1| threonyl-tRNA synthetase [synthetic construct]
          Length = 718

 Score =  570 bits (1469), Expect = e-160,   Method: Composition-based stats.
 Identities = 232/670 (34%), Positives = 356/670 (53%), Gaps = 30/670 (4%)

Query: 2   PSDIKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           P  IK++ P G  I     + T   +A  IS +LA  AVA  +NG+  DL  P+  +  +
Sbjct: 58  PRTIKISLPGGQKIDAVAWNTTPYQLARQISSTLADTAVAAQVNGEPYDLERPLETDSDL 117

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD--KEQPFSSD 117
             +T + P   AV  HS  H++  A +  +    +  GP  E GFY+DF   KE+     
Sbjct: 118 RFLTFDSPEGKAVFWHSSTHVLGAAAEQ-FLGAVLCRGPSTEYGFYHDFFLGKERTIRGS 176

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           EL  +E+  QE+ A   PF +   S ++ R+LF+     +K+ ++E        T+Y  G
Sbjct: 177 ELPVLERICQELTAAARPFRRLEASRDQLRQLFK--DNPFKLHLIEEKVTGPTATVYGCG 234

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
              DLC+GPH+R TGQ+     L   +  +    +    L R+ G ++ T + L  +  +
Sbjct: 235 TLVDLCQGPHLRHTGQIGGLKLLSNSSSLWRSSGAPET-LQRVSGISFPTTELLRVWEAW 293

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINT 296
            EE+E RDHR++ +E +LF   E   G  F+  +G +++  L++++R +     + E+ T
Sbjct: 294 REEAELRDHRRIGKEQELFFFHELSPGSCFFLPRGTRVYNALVAFIRAEYAHRGFSEVKT 353

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCA----------DDTIKDLRT-FALKPMNCPGHV 345
           P +    LW+QSGHW+ Y+ +MFAV+            DD+ + +    ALKPMNCP H 
Sbjct: 354 PTLFSTKLWEQSGHWEHYQEDMFAVQPPGSDRPPSSQSDDSTRHITDTLALKPMNCPAHC 413

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +F H  +S+RELP+RLA+FG+++R E SG L GL R+R F QDDAH+FCT +Q+  E  
Sbjct: 414 LMFAHRPRSWRELPLRLADFGALHRAEASGGLGGLTRLRCFQQDDAHIFCTTDQLEAEIQ 473

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
              + + S+Y   GF   +  LSTRP   +G   LWD AE ++K  L             
Sbjct: 474 SCLDFLRSVYAVLGFSFRLA-LSTRPSGFLGDPCLWDQAEQVLKQALKEFGEPWD----- 527

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
            +  G+GAFYGPK +  L DA+GR  QCGTIQ+DF LP RF+  Y         PV+IHR
Sbjct: 528 -LNSGDGAFYGPKIDVHLHDALGRPHQCGTIQLDFQLPLRFDLQYKGQAGALERPVLIHR 586

Query: 526 AVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD 585
           AV GS+ER +G++ E+  G  PLWLSP Q +V  + S   EYA+E    L++  L  + D
Sbjct: 587 AVLGSVERLLGVLAESCGGKWPLWLSPFQVVVIPVGSEQEEYAKEAQQSLRAAGLVSDLD 646

Query: 586 -FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK- 643
                T++ +IR   +       + G KE S+R++ IR   +    +  L +A+  L + 
Sbjct: 647 ADSGLTLSRRIRRAQLAHYNFQFVVGQKEQSKRTVNIRTRDNRRLGEWDLPEAVQRLVEL 706

Query: 644 -ESLPPDCQK 652
             +  P+ ++
Sbjct: 707 QNTRVPNAEE 716


>gi|39644807|gb|AAH07824.2| TARS2 protein [Homo sapiens]
          Length = 709

 Score =  570 bits (1469), Expect = e-160,   Method: Composition-based stats.
 Identities = 232/670 (34%), Positives = 356/670 (53%), Gaps = 30/670 (4%)

Query: 2   PSDIKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           P  IK++ P G  I     + T   +A  IS +LA  AVA  +NG+  DL  P+  +  +
Sbjct: 49  PRTIKISLPGGQKIDAVAWNTTPYQLARQISSTLADTAVAAQVNGEPYDLERPLETDSDL 108

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD--KEQPFSSD 117
             +T + P   AV  HS  H++  A +  +    +  GP  E GFY+DF   KE+     
Sbjct: 109 RFLTFDSPEGKAVFWHSSTHVLGAAAEQ-FLGAVLCRGPSTEYGFYHDFFLGKERTIRGS 167

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           EL  +E+  QE+ A   PF +   S ++ R+LF+     +K+ ++E        T+Y  G
Sbjct: 168 ELPVLERICQELTAAARPFRRLEASRDQLRQLFK--DNPFKLHLIEEKVTGPTATVYGCG 225

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
              DLC+GPH+R TGQ+     L   +  +    +    L R+ G ++ T + L  +  +
Sbjct: 226 TLVDLCQGPHLRHTGQIGGLKLLSNSSSLWRSSGAPET-LQRVSGISFPTTELLRVWEAW 284

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINT 296
            EE+E RDHR++ +E +LF   E   G  F+  +G +++  L++++R +     + E+ T
Sbjct: 285 REEAELRDHRRIGKEQELFFFHELSPGSCFFLPRGTRVYNALVAFIRAEYAHRGFSEVKT 344

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCA----------DDTIKDLRT-FALKPMNCPGHV 345
           P +    LW+QSGHW+ Y+ +MFAV+            DD+ + +    ALKPMNCP H 
Sbjct: 345 PTLFSTKLWEQSGHWEHYQEDMFAVQPPGSDRPPSSQSDDSTRHITDTLALKPMNCPAHC 404

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +F H  +S+RELP+RLA+FG+++R E SG L GL R+R F QDDAH+FCT +Q+  E  
Sbjct: 405 LMFAHRPRSWRELPLRLADFGALHRAEASGGLGGLTRLRCFQQDDAHIFCTTDQLEAEIQ 464

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
              + + S+Y   GF   +  LSTRP   +G   LWD AE ++K  L             
Sbjct: 465 SCLDFLRSVYAVLGFSFRLA-LSTRPSGFLGDPCLWDQAEQVLKQALKEFGEPWD----- 518

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
            +  G+GAFYGPK +  L DA+GR  QCGTIQ+DF LP RF+  Y         PV+IHR
Sbjct: 519 -LNSGDGAFYGPKIDVHLHDALGRPHQCGTIQLDFQLPLRFDLQYKGQAGALERPVLIHR 577

Query: 526 AVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD 585
           AV GS+ER +G++ E+  G  PLWLSP Q +V  + S   EYA+E    L++  L  + D
Sbjct: 578 AVLGSVERLLGVLAESCGGKWPLWLSPFQVVVIPVGSEQEEYAKEAQQSLRAAGLVSDLD 637

Query: 586 -FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK- 643
                T++ +IR   +       + G KE S+R++ IR   +    +  L +A+  L + 
Sbjct: 638 ADSGLTLSRRIRRAQLAHYNFQFVVGQKEQSKRTVNIRTRDNRRLGEWDLPEAVQRLVEL 697

Query: 644 -ESLPPDCQK 652
             +  P+ ++
Sbjct: 698 QNTRVPNAEE 707


>gi|227889526|ref|ZP_04007331.1| threonyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
 gi|227850004|gb|EEJ60090.1| threonyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
          Length = 643

 Score =  570 bits (1469), Expect = e-160,   Method: Composition-based stats.
 Identities = 221/644 (34%), Positives = 351/644 (54%), Gaps = 23/644 (3%)

Query: 6   KLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITP 64
            +T PDGS K+F    +  ++A SI+ SL K AV   ING +  L   V  + +  IIT 
Sbjct: 4   SVTLPDGSKKDFDKAVSVKELASSIATSLGKAAVGAKINGVMKPLDYIVDEDVNAAIITD 63

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           +D   L ++R + A ++    +  +PE+++ +    E GF+ D DKE      EL ++EK
Sbjct: 64  KDEEGLDILRATAAFLLEAVAKRKYPELRLGMHEADEGGFFVDTDKEDQIKVTELPELEK 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
            MQ+ I          +   +  E+F+   + +K+++L+    ++ V +Y+ G++ D   
Sbjct: 124 AMQKAIKNGEKIEYTSMKKSELEEIFK--DDQFKLDLLKD--EEDEVAVYKLGDFVDFGF 179

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
              + +TG++K F KL+ VAGAYW G S+ PML RI+GTA+  +  L + L    E ++R
Sbjct: 180 DALLPNTGKIKNF-KLLSVAGAYWLGKSSNPMLQRIFGTAFFKKAALDEDLKRRAEIKER 238

Query: 245 DHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQ 302
           DHR + R++DLF +      G+ +W  KG  I + +  Y+  +++ D YE + TP +++ 
Sbjct: 239 DHRTIGRDLDLFFVDPKVGAGLPYWMPKGATIRRVVERYIVDKEVADGYEHVYTPVLMNV 298

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             ++ SGHW  YR +MF          D     L+PMNCP H+ ++ H ++SYRELP+R+
Sbjct: 299 DAYKTSGHWAHYRDDMFPPMDMG----DGEMLELRPMNCPSHIQIYKHHIRSYRELPIRI 354

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AE G ++R E SG+L GL RVR  T +D H F   +Q+  E  K+  LI+ +YKDF    
Sbjct: 355 AELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQIREEFAKVLKLIMDVYKDFDITD 414

Query: 423 IMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
              +LS R  K       +D +W+ +++++K  +D +       ++     GE AFYGPK
Sbjct: 415 YYFRLSYRDPKNTDKYYANDEMWERSQSMLKAAMDDLG------LDYVEAEGEAAFYGPK 468

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +   K A+G D    TIQ+DF LP RF   YV    E+  PVMIHR + G++ERFI  +
Sbjct: 469 LDIQTKTALGNDETMSTIQLDFMLPERFGLTYVGQDGEEHRPVMIHRGIVGTMERFIAYL 528

Query: 539 IENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
            E +KG  P WL+P+QA +  +       YA ++   L       E D RNE + YKIRE
Sbjct: 529 TEIYKGAFPTWLAPVQAEIIPVNEEAHGAYADKVREELAKRGFRAEVDHRNEKLGYKIRE 588

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
              +K+P  ++ GD+E +   + +RR+G+      SL + I  +
Sbjct: 589 SQTQKVPYTLVLGDEEMNANGVNVRRYGTEEQISKSLDEFINEI 632


>gi|157364839|ref|YP_001471606.1| threonyl-tRNA synthetase [Thermotoga lettingae TMO]
 gi|166987326|sp|A8F8Q8|SYT_THELT RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|157315443|gb|ABV34542.1| threonyl-tRNA synthetase [Thermotoga lettingae TMO]
          Length = 638

 Score =  570 bits (1469), Expect = e-160,   Method: Composition-based stats.
 Identities = 261/652 (40%), Positives = 395/652 (60%), Gaps = 34/652 (5%)

Query: 1   MPSDIKLTFPDGSIKNF--PVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REG 57
           MP  +K+   DG    F         ++  S       + +A   NGK+ DL   +  +G
Sbjct: 1   MPIKVKIK-NDG---EFISEKPVQIREIIRS------DEVIAAVFNGKLIDLRSTIDSDG 50

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWP--EVQVAIGPIIEDGFYYDFD-KEQPF 114
            +E +      +  V RH+ +HI+A+AV +++    V++ IGP IE+GFYYDF+      
Sbjct: 51  EVEFVDLFHELAPEVYRHTMSHILAQAVMNVYGKKNVRLGIGPAIENGFYYDFEILNGKI 110

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
           + ++L++IE++M++II ++ P  +  +S + A      K + YKVE+L+ I     VTL+
Sbjct: 111 TEEDLSRIEEEMKKIIEQNIPVERIEMSKDDAISFMTEKDQPYKVELLKEI-QDNKVTLF 169

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
           +QG++ DLCRGPH+ STG VK F KL+ V+GAYW+GD   PML R+YGTA+  Q+EL  Y
Sbjct: 170 KQGDFVDLCRGPHMPSTGMVKHF-KLLSVSGAYWKGDEKNPMLQRVYGTAFLRQEELKNY 228

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYE 292
           L  LEE+ KRDHRKL   +D+F I  D  +G+  +   G  I + L+ + R+  I+  YE
Sbjct: 229 LDLLEEARKRDHRKLGPALDIFFIDFDVAAGMPVFTPNGTVILKELMEFSRQLHIEYGYE 288

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+ TP V+ + LW+ SGHW+ Y+ NM+       T K+ + FA+KPMNCPGH+ V+ +  
Sbjct: 289 EVMTPLVMSEKLWRMSGHWEHYKENMYF------TTKEEQQFAIKPMNCPGHILVYKNKP 342

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
            SYR+LPVR  EFG V+R E SG LHGL RVR FTQDDAH+FC  +Q+ NE   + NL+ 
Sbjct: 343 VSYRDLPVRFFEFGKVHRYERSGVLHGLFRVRSFTQDDAHIFCRIDQVENEIAGVINLVH 402

Query: 413 SIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
            IY  FGF+    +LST PE  +G +A W+ A   ++  ++++       +   V   EG
Sbjct: 403 RIYSQFGFDYSA-ELSTMPEDHMGDEATWEKATEALRKAMESVG------LQYVVKEKEG 455

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           AFYGPK ++ ++D+IGR WQC TIQ+DF +P RF   Y +   +   PVMIHRA++GS+E
Sbjct: 456 AFYGPKIDFHVRDSIGRTWQCATIQLDFLMPQRFGLVYTSMDGKYQQPVMIHRAIYGSLE 515

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
           RF+GI+IE++ G  P WL+P+Q I+  I     EYA+++ +    + + ++ D R ET+ 
Sbjct: 516 RFLGILIEHYAGAFPTWLAPVQVIIIPIADRHFEYAEKVKSEFVKNGVRVKIDARRETVG 575

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           YKIR+    KIP +++ GD+EA   ++ +R  GS       +   +  +T+E
Sbjct: 576 YKIRDAQSMKIPYMLVVGDREADSEAVSVRTRGS-DFGSKPVKLVLEKITEE 626


>gi|227510530|ref|ZP_03940579.1| threonine--tRNA ligase [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
 gi|227190182|gb|EEI70249.1| threonine--tRNA ligase [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
          Length = 658

 Score =  570 bits (1469), Expect = e-160,   Method: Composition-based stats.
 Identities = 229/651 (35%), Positives = 368/651 (56%), Gaps = 22/651 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           S +   FPDGS+K F    T  D+A+SIS SL KKAVA  ++G+  + ++P+ +G  +EI
Sbjct: 13  SKLSFEFPDGSVKEFDDGVTAEDIAKSISISLGKKAVAGKVDGQFVNDNEPLHKGGKVEI 72

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQP-FSSDELA 120
           +T +    L V+R + A ++  A+ S + +++       +DGF+ D DK +   S D+L 
Sbjct: 73  VTGDSQDGLNVLRETAAQVLKAAIASNFKDIRFGESAADDDGFFVDTDKPETQISVDQLD 132

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            + K MQ+II++D P    +LS + A +  +   + Y+ E++  I     V  +  G++ 
Sbjct: 133 SLTKSMQQIISKDLPIKVTFLSKDDALK--QVVGDPYQTELINEIADGNQVKFFEIGDFK 190

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
            +  G  + STG+VK F KL+ VAGAYW+G S+ PML RIY TA+N Q EL + L   +E
Sbjct: 191 SVAEGAVLPSTGKVKIF-KLLSVAGAYWQGKSSNPMLQRIYATAFNKQSELDEDLKKRQE 249

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           + +RDHR +  ++DLF +      G+ +W   G  I +T+  Y+  +++ + YE + TP 
Sbjct: 250 AHERDHRVIGNQLDLFFVDPKVGAGLPYWMPNGATIRRTIERYIVDKEVANGYEHVYTPV 309

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           + +  L++QSGHW+ YR +MF          D     L+PMNCP H+ ++NH ++SYREL
Sbjct: 310 LANLDLYKQSGHWEHYREDMFPPMDMG----DGEELELRPMNCPSHIQIYNHHIRSYREL 365

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  T +D H F   +Q+  E   I  L++ +Y DF
Sbjct: 366 PLRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQIQEEFQNILKLMVEVYHDF 425

Query: 419 GFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
                  +LS R  +        D +W+ A++++KG +D +       ++     GE AF
Sbjct: 426 DINDYTFRLSYRDPENTEKYFDDDEMWNRAQSMLKGAMDELG------LDYVEAEGEAAF 479

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +   K A+G +    TIQ+DF LP RF+  YV    ++  PVMIHR +  ++ERF
Sbjct: 480 YGPKLDVQTKTALGNEETLSTIQLDFMLPERFDLHYVGEDGKQHRPVMIHRGLVSTMERF 539

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           +  + E +KG  P WL+P Q  +  ++     +YA++I + L+   +    D R E + Y
Sbjct: 540 VAYLTEIYKGAFPTWLAPHQVKIIPVSQDKHGDYAKQINDQLRRLKIRSSVDTRAEKMGY 599

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            IR+    KIP  ++ GD+E + +S+ +RR+G   TQ  SL   +  + K+
Sbjct: 600 LIRDAQTHKIPYTLVVGDEEVNGKSVSVRRYGEKETQAESLDAFVDEIQKD 650


>gi|227524682|ref|ZP_03954731.1| threonine--tRNA ligase [Lactobacillus hilgardii ATCC 8290]
 gi|227088166|gb|EEI23478.1| threonine--tRNA ligase [Lactobacillus hilgardii ATCC 8290]
          Length = 658

 Score =  570 bits (1469), Expect = e-160,   Method: Composition-based stats.
 Identities = 229/651 (35%), Positives = 368/651 (56%), Gaps = 22/651 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           S +   FPDGS+K F    T  D+A+SIS SL KKAVA  ++G+  + ++P+ +G  +EI
Sbjct: 13  SKLSFEFPDGSVKEFDDGVTAEDIAKSISISLGKKAVAGKVDGQFVNDNEPLHKGGKVEI 72

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQP-FSSDELA 120
           +T +    L V+R + A ++  A+ S + +++       +DGF+ D DK +   S D+L 
Sbjct: 73  VTGDSQDGLNVLRETAAQVLKAAIASNFKDIRFGESAADDDGFFVDTDKPETQISVDQLD 132

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            + K MQ+II++D P    +LS + A +  +   + Y+ E++  I     V  +  G++ 
Sbjct: 133 SLTKSMQQIISKDLPIKVTFLSKDDALK--QVVGDPYQTELINEIADGNQVKFFEIGDFK 190

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
            +  G  + STG+VK F KL+ VAGAYW+G S+ PML RIY TA+N Q EL + L   +E
Sbjct: 191 SVAEGAVLPSTGKVKIF-KLLSVAGAYWQGKSSNPMLQRIYATAFNKQSELDEDLKKRQE 249

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           + +RDHR +  ++DLF +      G+ +W   G  I +T+  Y+  +++ + YE + TP 
Sbjct: 250 AHERDHRVIGNQLDLFFVDPKVGAGLPYWMPNGATIRRTIERYIVDKEVANGYEHVYTPV 309

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           + +  L++QSGHW+ YR +MF          D     L+PMNCP H+ ++NH ++SYREL
Sbjct: 310 LANLDLYKQSGHWEHYREDMFPPMDMG----DGEELELRPMNCPSHIQIYNHHIRSYREL 365

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  T +D H F   +Q+  E   I  L++ +Y DF
Sbjct: 366 PLRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQIQEEFQNILKLMVEVYHDF 425

Query: 419 GFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
                  +LS R  +        D +W+ A++++KG +D +       ++     GE AF
Sbjct: 426 DINDYTFRLSYRDPENTEKYFDDDEMWNRAQSMLKGAMDELG------LDYVEAEGEAAF 479

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +   K A+G +    TIQ+DF LP RF+  YV    ++  PVMIHR +  ++ERF
Sbjct: 480 YGPKLDVQTKTALGNEETLSTIQLDFMLPERFDLHYVGEDGKQHRPVMIHRGLVSTMERF 539

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           +  + E +KG  P WL+P Q  +  ++     +YA++I + L+   +    D R E + Y
Sbjct: 540 VAYLTEIYKGAFPTWLAPHQVKIIPVSQDKHGDYAKQINDQLRRLKIRSSVDTRAEKMGY 599

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            IR+    KIP  ++ GD+E + +S+ +RR+G   TQ  SL   +  + K+
Sbjct: 600 LIRDAQTHKIPYTLVVGDEEVNGKSVSVRRYGEKETQAESLDTFVDEIQKD 650


>gi|227513539|ref|ZP_03943588.1| threonine--tRNA ligase [Lactobacillus buchneri ATCC 11577]
 gi|227083412|gb|EEI18724.1| threonine--tRNA ligase [Lactobacillus buchneri ATCC 11577]
          Length = 658

 Score =  570 bits (1468), Expect = e-160,   Method: Composition-based stats.
 Identities = 229/651 (35%), Positives = 368/651 (56%), Gaps = 22/651 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           S +   FPDGS+K F    T  D+A+SIS SL KKAVA  ++G+  + ++P+ +G  +EI
Sbjct: 13  SKLSFEFPDGSVKEFDDGVTAEDIAKSISISLGKKAVAGKVDGQFVNDNEPLHKGGKVEI 72

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQP-FSSDELA 120
           +T +    L V+R + A ++  A+ S + +++       +DGF+ D DK +   S D+L 
Sbjct: 73  VTGDSQDGLNVLRETAAQVLKAAIASNFKDIRFGESAADDDGFFVDTDKPETQISVDQLD 132

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            + K MQ+II++D P    +LS + A +  +   + Y+ E++  I     V  +  G++ 
Sbjct: 133 SLTKSMQQIISKDLPIKVMFLSKDDALK--QVVGDPYQTELINEIADGNQVKFFEIGDFK 190

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
            +  G  + STG+VK F KL+ VAGAYW+G S+ PML RIY TA+N Q EL + L   +E
Sbjct: 191 SVAEGAVLPSTGKVKIF-KLLSVAGAYWQGKSSNPMLQRIYATAFNKQSELDEDLKKRQE 249

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           + +RDHR +  ++DLF +      G+ +W   G  I +T+  Y+  +++ + YE + TP 
Sbjct: 250 AHERDHRVIGNQLDLFFVDPKVGAGLPYWMPNGATIRRTIERYIVDKEVANGYEHVYTPV 309

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           + +  L++QSGHW+ YR +MF          D     L+PMNCP H+ ++NH ++SYREL
Sbjct: 310 LANLDLYKQSGHWEHYREDMFPPMDMG----DGEELELRPMNCPSHIQIYNHHIRSYREL 365

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  T +D H F   +Q+  E   I  L++ +Y DF
Sbjct: 366 PLRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQIQEEFQNILKLMVEVYHDF 425

Query: 419 GFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
                  +LS R  +        D +W+ A++++KG +D +       ++     GE AF
Sbjct: 426 DINDYTFRLSYRDPENTEKYFDDDEMWNRAQSMLKGAMDELG------LDYVEAEGEAAF 479

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +   K A+G +    TIQ+DF LP RF+  YV    ++  PVMIHR +  ++ERF
Sbjct: 480 YGPKLDVQTKTALGNEETLSTIQLDFMLPERFDLHYVGEDGKQHRPVMIHRGLVSTMERF 539

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           +  + E +KG  P WL+P Q  +  ++     +YA++I + L+   +    D R E + Y
Sbjct: 540 VAYLTEIYKGAFPTWLAPHQVKIIPVSQDKHGDYAKQINDQLRRLKIRSSVDTRAEKMGY 599

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            IR+    KIP  ++ GD+E + +S+ +RR+G   TQ  SL   +  + K+
Sbjct: 600 LIRDAQTHKIPYTLVVGDEEVNGKSVSVRRYGEKETQAESLDTFVDEIQKD 650


>gi|221194423|ref|ZP_03567480.1| threonyl-tRNA synthetase [Atopobium rimae ATCC 49626]
 gi|221185327|gb|EEE17717.1| threonyl-tRNA synthetase [Atopobium rimae ATCC 49626]
          Length = 588

 Score =  570 bits (1468), Expect = e-160,   Method: Composition-based stats.
 Identities = 250/594 (42%), Positives = 367/594 (61%), Gaps = 19/594 (3%)

Query: 55  REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQP 113
            +G +  I       L VIRH+ AHI+A+A++ ++PE + A GP  E+GFYYD D  +  
Sbjct: 6   NDGHVGEIDDAAEE-LHVIRHTAAHILAQAIKRLYPEAKFAYGPATENGFYYDVDLGDTK 64

Query: 114 FSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTL 173
            ++++ + +E +M++I   +       LS ++A +L E + E YKVE +  +   E +T 
Sbjct: 65  INTEDFSALEAEMKKITKENLKIETFELSRDEAIKLMEERGETYKVEHIGDLDPAERITF 124

Query: 174 YRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQ 233
           Y+QGE+ D+C GPH+  T  VK F KL  V+GAYW+ D N  ML+R+ GTA+ T+ EL Q
Sbjct: 125 YKQGEYIDMCVGPHLLYTKGVKAF-KLTGVSGAYWKADKNNKMLTRVNGTAFATKDELEQ 183

Query: 234 YLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYE 292
           +L  LEE+EKRDHRK+ REM+LF +++ G G  FW   G  +   L  Y    +   +YE
Sbjct: 184 HLKMLEEAEKRDHRKIGREMELFMMSDFGPGSPFWLPNGMAVRNALTDYWHEMMVKFNYE 243

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+ TPQ+L + LW+ SGHWD Y+ NM+       T  D   FA+KPMNCPG   ++ +  
Sbjct: 244 EVLTPQILSRSLWETSGHWDHYKENMYT------TSVDEEDFAIKPMNCPGACLIYKNRP 297

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
           +SYR+LP++LAE G  +R E  G+LHGL RVR FTQDDAH+F   +Q+  +     +LI 
Sbjct: 298 RSYRDLPLKLAEAGLDHRYEMKGALHGLFRVREFTQDDAHIFIRPDQITEQVADASHLIT 357

Query: 413 SIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
           + Y  FGF    V+LSTRPE  +GSD  W+ AE  +K  L+++       I+  +  G+G
Sbjct: 358 AYYAQFGF-PYRVELSTRPENSMGSDEDWERAEQGLKDALESMG------IDYVLNEGDG 410

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           AFYGPK ++ L D +GR WQCGTIQ+DF LP  F   YV+S   K  P+MIHRA FGS +
Sbjct: 411 AFYGPKIDFHLTDCLGRSWQCGTIQLDFQLPHNFELEYVDSDGTKKQPIMIHRAGFGSFD 470

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
           RFIGI+ E+++G  P+WL+P Q  V  ++  + EYA E+A  L++  + ++ D R+E I 
Sbjct: 471 RFIGILTEHYEGKFPVWLAPCQVKVLPVSEKSREYAHEVAGALQAAGIRVKVDNRDEKIG 530

Query: 593 YKIREHS-IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           YKIRE   + ++P ++I G+KE    +I +R   + T Q  +L   I  ++KE+
Sbjct: 531 YKIREARSLDRVPYMLIIGEKEVEAHNISVRDRSNETVQS-TLDAFIAKVSKEN 583


>gi|251772034|gb|EES52606.1| threonyl-tRNA synthetase [Leptospirillum ferrodiazotrophum]
          Length = 587

 Score =  570 bits (1468), Expect = e-160,   Method: Composition-based stats.
 Identities = 261/577 (45%), Positives = 359/577 (62%), Gaps = 14/577 (2%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           L  +RHS AH++A+AV+ ++P  QV IGP  E+GFYYDF  E+PFS ++L +IE++M+ I
Sbjct: 15  LMALRHSAAHVLAQAVKRLFPSAQVGIGPATEEGFYYDFRFERPFSPEDLEKIEEEMRRI 74

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
           IA D+P +++ LS E A ELFE   E +K+EIL SIPA+  +T+Y QGE+ DLCRGPH+ 
Sbjct: 75  IATDAPIVRRPLSREAAHELFEKTGEPFKLEILHSIPAEAEITVYDQGEFTDLCRGPHLP 134

Query: 190 STGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKL 249
            TGQ+    KL+  +GAYW+G    P L RIYGTA+ TQ EL  YL  LEE  +RDHRK+
Sbjct: 135 GTGQIG-AVKLLSSSGAYWKGVETNPSLQRIYGTAFPTQAELDAYLARLEEIRQRDHRKI 193

Query: 250 AREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQ 307
            +E   F   ++   G++ W  +G +I + +    + R  +  Y+ + TP +    LW+Q
Sbjct: 194 GKEQGFFRTLDENGAGMVLWLPRGARIRRVIEEIWKTRHDRHGYQYVYTPHIARLDLWKQ 253

Query: 308 SGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGS 367
           SGHWD YR +MF+         +   F LKPMNCP H+ +F   +KSYR+LPVRLAE G+
Sbjct: 254 SGHWDFYRESMFSPMEI-----EGSEFELKPMNCPFHILIFKEAVKSYRDLPVRLAELGT 308

Query: 368 VYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKL 427
           VYR E SG+LHGL+RVRGFTQDDAH+FC  E + +E  K+  L+  +   FGF    V L
Sbjct: 309 VYRYERSGTLHGLLRVRGFTQDDAHIFCRPEDIASEIGKVLTLVDEMLLPFGFTNRSVYL 368

Query: 428 STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAI 487
           STRPE  VGSD  W  A   ++  L          I   +  GEG FYGPK +    D +
Sbjct: 369 STRPEGSVGSDENWALATGALEEALKNAG------IPYEIDPGEGVFYGPKIDMKFHDVL 422

Query: 488 GRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           GR WQ  TIQVDFNLP +F+  Y +S      P+MIHRA+ GS+ERF GI++E+FKG  P
Sbjct: 423 GRTWQLSTIQVDFNLPEKFDITYRDSSGNDVRPIMIHRALLGSVERFFGILVEHFKGAFP 482

Query: 548 LWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIII 607
           LWL+P Q  +  I    + YA++IA  L+   + + TDFRNE I  KIR+  + KIP + 
Sbjct: 483 LWLAPEQVTILPIADRHIPYARKIAETLEQEGVRVVTDFRNEKIGAKIRDAQLMKIPQMW 542

Query: 608 ICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           + GD+EA + +I IR         +   +A+  + +E
Sbjct: 543 VLGDREAQDETISIRHRDGQAGGTLPWREALVAIKEE 579


>gi|332295956|ref|YP_004437879.1| threonyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
 gi|332179059|gb|AEE14748.1| threonyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
          Length = 606

 Score =  570 bits (1468), Expect = e-160,   Method: Composition-based stats.
 Identities = 270/619 (43%), Positives = 395/619 (63%), Gaps = 19/619 (3%)

Query: 37  KAVAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAI 96
           + +    N K+ D  D     S++ +T +D  SL V+RHS AH++A+AV+ ++PE ++AI
Sbjct: 3   QIICYLDNDKLVDFRDYREGESLKPVTDKDKESLDVLRHSAAHLLAQAVKELFPETKLAI 62

Query: 97  GPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEA 156
           GP IE+GFYYD  +++PF+ ++L  IEKKM+EI  RD    K  L  E A +LF   KE 
Sbjct: 63  GPSIENGFYYDIYRKEPFTPEDLEIIEKKMKEIAQRDLEITKMCLKKEDAIKLFSDLKED 122

Query: 157 YKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPM 216
           YK+E+++ IP  + V +Y+QG + DLCRGPH+ STGQ+K F KL+ VAGAYWRGD  R M
Sbjct: 123 YKLELIKDIPDDD-VCIYKQGNFIDLCRGPHLSSTGQIKHF-KLLNVAGAYWRGDEKREM 180

Query: 217 LSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKI 275
           L RIYGTA+ T+++L  +L +LEE  KRDHRKL +E+DL+ +A++   G+I WH  G  I
Sbjct: 181 LQRIYGTAFWTEEDLKNHLNWLEEVYKRDHRKLGKELDLYSMADEVGAGLILWHPNGGVI 240

Query: 276 FQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
              +  Y+R   +K  YE + TP +++  +W+ SGH+D Y+ NM+  +       D + +
Sbjct: 241 RTIIEDYLRKEHVKRGYEIVYTPHMMNLKIWKISGHFDFYKENMYIFE------NDGQEY 294

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           A+KPMNCPGH+ ++N   +SYR+LP+R  E G+VYR E SG+LHGL+RVRGFTQDDAH+F
Sbjct: 295 AVKPMNCPGHMMIYNSKTRSYRDLPIRFFELGTVYRFERSGALHGLLRVRGFTQDDAHIF 354

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDT 454
           CT EQ+ +E + + N    + + FGF+ ++  + TRP+  +G+D  W+ A N +   L  
Sbjct: 355 CTNEQLQDEIIGVLNFAKDMMELFGFKYVVS-VGTRPDGSIGTDEQWNLATNSLISALK- 412

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH 514
                Q  I   ++ G+GAFYGPK +  L DA+GR W   TIQVDF LP RFN  Y +  
Sbjct: 413 -----QKNIEFEIIDGDGAFYGPKIQVELIDALGRKWTGPTIQVDFALPERFNLEYADKD 467

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA--VEYAQEIA 572
             K  PVMIHR V GS+ERF+G +IEN+ G  P WLSPIQ I+  +   +  +EY+ E+ 
Sbjct: 468 GTKKRPVMIHRTVVGSMERFLGALIENYAGVFPAWLSPIQIIIIPVKEDSELLEYSSEVE 527

Query: 573 NLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
             L      ++ D RNET+ Y+IR+  + +IP I++ G KE  E+ I +R  G     ++
Sbjct: 528 KKLSKEDYRVKVDKRNETLKYRIRDAELNRIPYILVIGKKELDEKLISLRTRGMKDEGQM 587

Query: 633 SLLDAIPILTKESLPPDCQ 651
           S+ + +  L+ E+  P  +
Sbjct: 588 SIEEFLKRLSLEARIPSGK 606


>gi|166154796|ref|YP_001654914.1| threonyl-tRNA synthetase [Chlamydia trachomatis 434/Bu]
 gi|166155671|ref|YP_001653926.1| threonyl-tRNA synthetase [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
 gi|301336072|ref|ZP_07224316.1| threonyl-tRNA synthetase [Chlamydia trachomatis L2tet1]
 gi|238687393|sp|B0B8F5|SYT_CHLT2 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|238687442|sp|B0BA34|SYT_CHLTB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|165930784|emb|CAP04281.1| threonyl-tRNA synthetase [Chlamydia trachomatis 434/Bu]
 gi|165931659|emb|CAP07235.1| threonyl-tRNA synthetase [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
          Length = 635

 Score =  569 bits (1467), Expect = e-160,   Method: Composition-based stats.
 Identities = 244/631 (38%), Positives = 367/631 (58%), Gaps = 19/631 (3%)

Query: 16  NFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIR 74
             P  A+  D+A  + +S     V   IN +  DLS  +++G ++  +T +DP+   +  
Sbjct: 12  ELPEGASAMDLANKMKQSHC--FVGALINDQEKDLSTTLQDGDTVLFLTWDDPKGREIFL 69

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDS 134
           H+ AHI+A+AV  +WP  Q  IGP+I+ GFYYDF      S ++   IE   + I     
Sbjct: 70  HTSAHILAQAVLRLWPSAQPTIGPVIDQGFYYDFA-NLSISEEDFPAIEAMAKTIAEEKF 128

Query: 135 PFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQV 194
           P  +Q    ++A  L    +  +K E++  +P +  ++ Y QGE+ DLCRGPH+ ST  V
Sbjct: 129 PISRQVFPDKEA-ALAYFSQNPFKAELIAELPEEVEISAYTQGEFLDLCRGPHLPSTAPV 187

Query: 195 KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMD 254
           K F KL++ + AYW+GD +R  L RIYG ++ T +EL ++L+ LEE++KRDHR L  ++D
Sbjct: 188 KAF-KLLRTSSAYWKGDPSRESLIRIYGVSFPTTKELKEHLHQLEEAKKRDHRVLGTKLD 246

Query: 255 LFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDS 313
           LF      +G+ F+H +G  ++  L+ Y +R   +  Y++I TPQ++++ LW+ SGHW++
Sbjct: 247 LFSQQTCSAGMPFFHPRGMVVWNALVDYWKRLHQRAGYQQIQTPQLMNRELWEISGHWEN 306

Query: 314 YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP 373
           Y+ NM+ +        D   +A+KPMNCPG +  +   L SYRE P+R+AE G V+R+E 
Sbjct: 307 YKENMYTLTV------DEEDYAIKPMNCPGCMLYYKTQLHSYREFPLRIAEIGHVHRHEL 360

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
           SG+L GLMRVR F QDDAHVF T EQ+  E L I NL+  +Y  FG E  +   +   + 
Sbjct: 361 SGALSGLMRVRTFHQDDAHVFLTPEQVEEETLNILNLVSELYGTFGLEYHLELSTRPEQG 420

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
            +GSD LW+ A   +K  L   +          +  GEGAFYGPK +  +KDAI R WQC
Sbjct: 421 TIGSDDLWELATEALKRALVKSQKP------FIISPGEGAFYGPKIDIHVKDAINRTWQC 474

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI 553
           GTIQ+D  LP RF+  Y N+  EK  P+M+HRA+FGSIERF+GI+IE+FKG  PLWLSP 
Sbjct: 475 GTIQLDMFLPERFDLKYTNAQGEKSTPIMLHRALFGSIERFLGILIEHFKGRFPLWLSPE 534

Query: 554 QAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
              + T+       AQE+A       + +  D  NE+++ KIR     ++  +I  GDKE
Sbjct: 535 HVRIITVADRHEARAQELAKHFSQMGIIVSVDSSNESVSKKIRNAQNMQVNYMITIGDKE 594

Query: 614 ASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
                + +R   +     +++     ++ +E
Sbjct: 595 LETHLLAVRTRDNRVLNDIAVEQFSHVILEE 625


>gi|312195608|ref|YP_004015669.1| threonyl-tRNA synthetase [Frankia sp. EuI1c]
 gi|311226944|gb|ADP79799.1| threonyl-tRNA synthetase [Frankia sp. EuI1c]
          Length = 662

 Score =  569 bits (1467), Expect = e-160,   Method: Composition-based stats.
 Identities = 243/666 (36%), Positives = 374/666 (56%), Gaps = 42/666 (6%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI-EI 61
           SD+++T      ++  V  TG+  A+  +    +  +A  + G+  DL+  + +G + E 
Sbjct: 2   SDLRVTVQHAEQRDDRVVTTGTTAADLFAAD--RSVIAARVGGQQRDLAHVLADGDVVEP 59

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           IT + P   A++RHS AH++A+AVQ ++P+ ++ IGP I++GFYYDFD E+PFS+++L  
Sbjct: 60  ITVDSPDGRAIVRHSTAHVVAQAVQDLFPKARLGIGPPIQNGFYYDFDVEKPFSAEDLKA 119

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENV---------- 171
           IEK+ +EI+     F ++ ++ + AR   E   E YK+E++    +   V          
Sbjct: 120 IEKRAREIVKAGQRFSRRAVTDDAARA--ELADEPYKLELIGLKSSAGEVDANDADAAVE 177

Query: 172 ------TLYRQGE-------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLS 218
                 T+Y   +       W DLCRGPHV +T  +  F      A AYWRG    P L 
Sbjct: 178 VGAGELTIYDNLDAKTGELCWKDLCRGPHVPTTRHIPAFAIQRS-AAAYWRGSEKNPQLQ 236

Query: 219 RIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQ 277
           RIYGTAW ++  L  +L  L E+EKRDHR+L  E+DLF    + G G+  +H KG  I  
Sbjct: 237 RIYGTAWESKDALAGHLAMLAEAEKRDHRRLGAELDLFSFPTELGPGLAVFHPKGGAIRT 296

Query: 278 TLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFAL 336
            +  Y RR  I+  YE +NTP +    L++ SGH D +   M+     D        + L
Sbjct: 297 VMEDYSRRRHIEAGYEFVNTPHITKSTLYEISGHLDWFADGMYPPMSLDG----GTDYYL 352

Query: 337 KPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT 396
           KPMNCP H+ +F    +SYRELP+RL EFG+VYR E SG +HGL RVRG TQDDAH+FC 
Sbjct: 353 KPMNCPMHILIFKSRGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRVRGLTQDDAHLFCA 412

Query: 397 KEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR-VGSDALWDDAENIMKGVLDTI 455
           ++Q+  E       ++ + +D+G     ++LSTRPE + +G+D  W+ A ++++   +  
Sbjct: 413 RDQLPEELDSTLKFVLGLLRDYGLTDFYLELSTRPEGKAIGTDEEWEQATSLLREAAE-- 470

Query: 456 KNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS 515
               +  +   +  G GAFYGPK     KDAIGR WQ  TIQVDF LP RF+  Y  +  
Sbjct: 471 ----KQDLELVMDPGGGAFYGPKISVQAKDAIGRTWQLSTIQVDFQLPQRFDMEYQAADG 526

Query: 516 EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLL 575
            +  P MIHRA+FG+IERF  I++E++ G +P WL+P+Q +   IT   V Y +++A  L
Sbjct: 527 TRQRPFMIHRALFGTIERFFAILLEHYAGAMPPWLAPVQVVGIPITDEHVPYLKDVAAKL 586

Query: 576 KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
            +  + +E D  +  +  KIR+   +K+P ++I G  + ++ ++  R    T    V + 
Sbjct: 587 TAKGIRVEVDASDNRMQKKIRDAQKQKVPYMLIAGADDVAKDAVSFRYRDGTQRNAVPVD 646

Query: 636 DAIPIL 641
           +A+  +
Sbjct: 647 EAVAEI 652


>gi|218282135|ref|ZP_03488434.1| hypothetical protein EUBIFOR_01014 [Eubacterium biforme DSM 3989]
 gi|218216861|gb|EEC90399.1| hypothetical protein EUBIFOR_01014 [Eubacterium biforme DSM 3989]
          Length = 587

 Score =  569 bits (1467), Expect = e-160,   Method: Composition-based stats.
 Identities = 237/593 (39%), Positives = 363/593 (61%), Gaps = 19/593 (3%)

Query: 55  REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQP 113
            E  +E++   +   L+++ HSCAH+MA+AV+ ++P  +  +GP+I +GFYYD D  +  
Sbjct: 2   EENKMELVNVLENEHLSMLNHSCAHMMAQAVKRLYPNAKFWVGPVISEGFYYDMDLGDVK 61

Query: 114 FSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTL 173
              ++LA+IEK+M++I       +++ +S E A E+F+   + YK++++  +    N+T+
Sbjct: 62  LKEEDLAKIEKEMKKIAKDGKRIVREEISKEDALEMFK--DDPYKIDLINGL-EDGNITI 118

Query: 174 YRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQ 233
           YRQGE+ DLCRGPHV +    K F KL+K +GAYW+GD+N  ML R+YG  ++T++EL  
Sbjct: 119 YRQGEFADLCRGPHVETVKMCKNF-KLLKHSGAYWKGDANNKMLQRVYGICFDTKEELEA 177

Query: 234 YLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYE 292
           +L  LEE++KRDH+KL +EM LF I+E   G+  +   G  +   L  Y  +   K+ Y+
Sbjct: 178 HLEALEEAKKRDHKKLGKEMGLFTISEFAPGMPIFLPDGMILRNILEQYWYQEHTKEGYQ 237

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
            I TP ++ + LW+ SGHWD Y+ NM+          D R FA+KPMNCPG + V+N  L
Sbjct: 238 FIKTPIMMSKELWELSGHWDHYKDNMYTSMV------DDREFAIKPMNCPGALLVYNSTL 291

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
            SY++LP+RL E G V+R+E SG+L+GL RVR FTQDDAH+F T +Q+  E  K+  L+ 
Sbjct: 292 HSYKDLPLRLGELGQVHRHEASGALNGLFRVRTFTQDDAHLFVTPDQLEEEVKKVLQLVD 351

Query: 413 SIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
            IY  FG    +   +      +GS+ +WD +E  +                  V  G+G
Sbjct: 352 RIYSVFGLPYEIELSTRPESGYIGSEEIWDVSEKALAQACVHAGK------EYKVNPGDG 405

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           AFYGPK +  +KD++GR WQCGT+Q+D NLP RF   YV++   K  P+M+HR V+GS+E
Sbjct: 406 AFYGPKLDIHIKDSLGRVWQCGTVQLDMNLPERFECKYVDADGTKKTPIMLHRVVYGSVE 465

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTI-TSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           RFIGI+IE+F G+ PLWL+P Q +V  +     VEYA ++ + L +  +    D RNE +
Sbjct: 466 RFIGILIEHFGGHFPLWLAPRQFVVIPVHHEKHVEYANKVCDALTALGMRATVDSRNEKL 525

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            Y++RE  ++K+   I+ GD E    ++ IR+ G   +  +SL +A+     E
Sbjct: 526 GYRVREAQLQKVTYQIVVGDGEQENNTVTIRQSGKKDSVTLSLNEALAKFKAE 578


>gi|311894878|dbj|BAJ27286.1| putative threonyl-tRNA synthetase [Kitasatospora setae KM-6054]
          Length = 659

 Score =  569 bits (1467), Expect = e-160,   Method: Composition-based stats.
 Identities = 259/668 (38%), Positives = 378/668 (56%), Gaps = 45/668 (6%)

Query: 3   SDIKLTF---PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS- 58
           +D+++     PD   +      T +++         +  +A  + G++ DL+  V +G  
Sbjct: 2   TDVRIIINREPDREERVVTTGTTAAELFAD-----DRAVIAARVGGQLKDLAYAVLDGDE 56

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           +E +    P  L ++RHS AH+MA+AVQ ++PE ++ IGP + DGFYYDFD E+PF  D+
Sbjct: 57  VEPVVISSPDGLDILRHSTAHVMAQAVQQVFPEAKLGIGPPVRDGFYYDFDVERPFQPDD 116

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-------------ESI 165
           L  IEKKMQEII R   F ++ ++ E ARE  E  KE YK+E++             +  
Sbjct: 117 LKVIEKKMQEIIKRGQKFSRRVVTDEAARE--ELAKEPYKLELIGLKGSAATAGEGADVE 174

Query: 166 PAKENVTLYRQGE-------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLS 218
                +T+Y   +       W DLCRGPH+ ST  +  F KLM+ A AYWRG    PML 
Sbjct: 175 VGAGELTIYDNLDPKTGELCWGDLCRGPHLPSTRHIPAF-KLMRSAAAYWRGSERNPMLQ 233

Query: 219 RIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQ 277
           R+YGTAW T+ EL  +L FLEE+ KRDHRKL  E+DLF I  + GSG+  +H KG  I +
Sbjct: 234 RLYGTAWPTKDELKAHLDFLEEAAKRDHRKLGNELDLFSIPEQIGSGLAVFHPKGGIIRR 293

Query: 278 TLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFAL 336
           T+  Y R R  ++ YE + TP      L++ SGH D Y   M+     D    +   + L
Sbjct: 294 TMEDYSRKRHEEEGYEFVYTPHATKGKLFETSGHLDWYADGMYPPMQLD----EGVDYYL 349

Query: 337 KPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT 396
           KPMNCP H  +F+   +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDDAH++CT
Sbjct: 350 KPMNCPMHNLIFDARGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYCT 409

Query: 397 KEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDTI 455
           +EQM +E  +    ++ + +D+G     ++LST+  +  VGSD  W++A  ++  V +  
Sbjct: 410 REQMADELDRTLTFVLDLLRDYGLNDFYLELSTKDPEKFVGSDDAWEEATAVLASVAE-- 467

Query: 456 KNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS 515
               +  +      G  AFYGPK     +DAIGR WQ  TIQ+DFNLP RF+  Y ++  
Sbjct: 468 ----KQGLPLVPDPGGAAFYGPKISVQARDAIGRTWQMSTIQLDFNLPERFDLEYTSADG 523

Query: 516 EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLL 575
            +  PVMIHRA+FGSIERF  +++E++ G +P WL+P+      IT   V Y  ++A  L
Sbjct: 524 SRQRPVMIHRALFGSIERFFAVLLEHYAGAMPPWLAPVTVTGIPITDEHVPYLLDVAAEL 583

Query: 576 KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
           K H + +E D  ++ +  KIR     K+P ++I G+ +    ++  R         V   
Sbjct: 584 KKHGIRVEVDTSDDRMQKKIRNAQKTKVPFMLIAGNDDVEAGAVSFRYRSGEQKNGVPKD 643

Query: 636 DAIPILTK 643
           +AI  + +
Sbjct: 644 EAIAEIVE 651


>gi|328881181|emb|CCA54420.1| Threonyl-tRNA synthetase [Streptomyces venezuelae ATCC 10712]
          Length = 640

 Score =  569 bits (1466), Expect = e-160,   Method: Composition-based stats.
 Identities = 252/631 (39%), Positives = 369/631 (58%), Gaps = 36/631 (5%)

Query: 36  KKAVAVAINGKVCDLSDPVREGSI-EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           +  +A  + G++ DLS  + +G + E +    P  L ++RHS AH+MA+AVQ ++PE ++
Sbjct: 15  RTVIAARVGGELKDLSYELADGDVVEGVEISSPDGLDILRHSTAHVMAQAVQELFPEAKL 74

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            IGP + DGFYYDFD E+PF+ ++L  IEKKMQEI  R   F ++ ++ E AR   E   
Sbjct: 75  GIGPPVRDGFYYDFDVEKPFTPEDLKVIEKKMQEIQKRGQRFARRVVTDEDARA--ELAD 132

Query: 155 EAYKVEILESIP------------AKENVTLYRQGE-------WFDLCRGPHVRSTGQVK 195
           E YK+E++                    +T+Y   +       W DLCRGPH+ +T  + 
Sbjct: 133 EPYKLELIGIKGSASTDDGANVEVGGGELTIYDNLDAKTGELCWKDLCRGPHLPTTRNIP 192

Query: 196 KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDL 255
            F KLM+ A AYWRG    PML RIYGTAW ++ EL  +L FL E+EKRDHRKL  E+DL
Sbjct: 193 AF-KLMRNAAAYWRGSEKNPMLQRIYGTAWPSKDELKAHLDFLAEAEKRDHRKLGNELDL 251

Query: 256 FHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDS 313
           F I ++ GSG+  +H KG  I + +  Y R R  ++ YE + +P      L+++SGH D 
Sbjct: 252 FSIPDEIGSGLAVFHPKGGIIRRVMEDYSRKRHEEEGYEFVYSPHATKGKLFEKSGHLDW 311

Query: 314 YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP 373
           Y   M+     D    +   + LKPMNCP H  +F+   +SYRELP+RL EFG+VYR E 
Sbjct: 312 YAEGMYPPMQLD----EGVDYYLKPMNCPMHNLIFDARGRSYRELPLRLFEFGTVYRYEK 367

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
           SG +HGL R RGFTQDDAH++CTKEQM  E  K    ++++ +D+G     ++LST+  +
Sbjct: 368 SGVVHGLTRARGFTQDDAHIYCTKEQMAEELDKTLTFVLNLLRDYGLTDFYLELSTKDPE 427

Query: 434 -RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
             VGSD +W++A  +++ V +      +  +      G  AFYGPK     +DAIGR WQ
Sbjct: 428 KFVGSDEIWEEATAVLQQVAE------KQGLPLTPDPGGAAFYGPKISVQARDAIGRTWQ 481

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
             T+Q+DFNLP RF+  Y      K  PVMIHRA+FGSIERF  +++E++ G +P WL+P
Sbjct: 482 MSTVQLDFNLPERFDLEYTAPDGTKQRPVMIHRALFGSIERFFAVLLEHYAGAMPPWLAP 541

Query: 553 IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
           +QA    I  + V+Y  E A   K   L ++ D  ++ +  KIR    +K+P +II GD+
Sbjct: 542 VQATGIPIGDAHVDYLHEFAAKAKKQGLRVDVDSSSDRMQKKIRNAQKQKVPFMIIAGDE 601

Query: 613 EASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           + +  ++  R    +    + + +AI  + K
Sbjct: 602 DMAAGAVSFRYRDGSQENGIPVDEAIAKIAK 632


>gi|254580109|ref|XP_002496040.1| ZYRO0C09086p [Zygosaccharomyces rouxii]
 gi|238938931|emb|CAR27107.1| ZYRO0C09086p [Zygosaccharomyces rouxii]
          Length = 716

 Score =  569 bits (1466), Expect = e-160,   Method: Composition-based stats.
 Identities = 238/678 (35%), Positives = 355/678 (52%), Gaps = 46/678 (6%)

Query: 1   MPS-DIKLTFPDGSIKN-FPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR--- 55
           MP   +K+   DGSIK          D+A+SI++SL  K     ++G++ DL  P     
Sbjct: 52  MPRVPLKIVLRDGSIKEATAWETAPMDIAKSIAKSLPDKLCIAKVDGQLWDLERPFEGTE 111

Query: 56  --EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD---- 109
             E  +E++  E      V  HS AH++ EA +       +  GP  +DGF+YD      
Sbjct: 112 GQELRLELLDFESKEGQQVFWHSSAHVLGEACECNL-GAHICFGPPTDDGFFYDMAVRDS 170

Query: 110 -----KEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE- 163
                +E+  S  +   +E   +  I +   F +  ++ E   ++F   K  YK  +++ 
Sbjct: 171 LNPKAEEKTVSQADFPNLEGVAKNAIKQKQKFERLLMTKEDLLKMFSYSK--YKTYLIQT 228

Query: 164 SIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
            +P   + T+YR G   DLC GPH+  TG++K F K++K + +Y+ GDSN   L RIYG 
Sbjct: 229 KVPDGGSSTVYRCGPLIDLCMGPHIPHTGRIKAF-KILKNSASYFLGDSNNESLQRIYGI 287

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYM 283
           ++  ++ +  +L FLEE+  RDHR++ RE +LF   E   G  FW   G +I+ TL+  +
Sbjct: 288 SFPDKKLMDAHLKFLEEASLRDHRRIGREQELFMFNEMSPGSCFWLPHGTRIYSTLVDLL 347

Query: 284 RRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
           + + +   YEE+ TP + +  LW+ SGHW  Y+ NMF  +       +   + LKPMNCP
Sbjct: 348 KNEYRKRGYEEVITPNMYNSKLWETSGHWGHYKENMFTFEV------EKEMYGLKPMNCP 401

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN 402
           GH  +F    +SYRELP R+A+FG ++RNE SG+L GL RVR F QDDAH+FC  +Q+  
Sbjct: 402 GHALMFKSRERSYRELPWRVADFGVIHRNEFSGALTGLTRVRRFQQDDAHIFCRSDQIGQ 461

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
           E  +I + +  IY  FGFE  M +LSTRPEK VG    W+ AE             ++  
Sbjct: 462 EIERIFDFLSFIYGVFGFEFKM-ELSTRPEKYVGKLETWNAAEAT------LEAALNKWG 514

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-----EK 517
               +   +GAFYGPK + ++ DA+ R  QC TIQ+DF LP RF   Y +  +       
Sbjct: 515 GKWELNPADGAFYGPKIDIMISDALRRWHQCATIQLDFQLPDRFALEYKSKDNDNEGETY 574

Query: 518 CHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKS 577
             PVMIHRA+ GS+ER   I+ E+F G  P WLSP Q +V  +      YAQE+ + + +
Sbjct: 575 ERPVMIHRAILGSVERMTAILTEHFAGKWPFWLSPRQILVVPVGVKYQPYAQEVRDKMHN 634

Query: 578 HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ----KVS 633
                + D    T+  K+R   + K   I I G++E +E+S+ IR       Q     VS
Sbjct: 635 AGFYADVDLSGNTLQKKVRNGQMLKYNFIFIVGEQEMNEKSVNIRNRDVMEQQGKNATVS 694

Query: 634 LLDAIPILTKESLPPDCQ 651
           +   +  L K  L  D +
Sbjct: 695 VETVLEQLKK--LKSDMR 710


>gi|255994452|ref|ZP_05427587.1| threonine--tRNA ligase [Eubacterium saphenum ATCC 49989]
 gi|255993165|gb|EEU03254.1| threonine--tRNA ligase [Eubacterium saphenum ATCC 49989]
          Length = 581

 Score =  569 bits (1466), Expect = e-160,   Method: Composition-based stats.
 Identities = 252/586 (43%), Positives = 377/586 (64%), Gaps = 15/586 (2%)

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           E +   D       RH+ +HIMA+A++ +WPE ++AIGP I+DGFYYD D +   + D+L
Sbjct: 4   EKVDFSDENVKEAYRHTSSHIMAQAIKRLWPEAKLAIGPAIKDGFYYDVDLDHKITDDDL 63

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +I+K+M++II  + P  K  LS +KA EL   K E YKVE++  +P+ E ++ Y QGE+
Sbjct: 64  KKIQKEMKKIIKANYPLEKSILSRDKALELMRQKDEDYKVELINDLPSDEEISFYTQGEF 123

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLC GPHV STG++K   KLM VAGAYWRG+    ML R+YGTA+++Q+EL +Y+  +E
Sbjct: 124 TDLCAGPHVESTGKIK-AIKLMSVAGAYWRGNEKNKMLQRVYGTAFSSQEELQEYIDRIE 182

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E++KRDHRK+ +EMDLF + E+G G  F+   G  +   L +Y R++ +   Y+EI TP 
Sbjct: 183 EAKKRDHRKIGKEMDLFALMEEGPGFPFFLPNGMILRTELENYWRQEHRKRGYDEIKTPL 242

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L + LW  SGH+D Y+ NM+       T  D   +A+KPMNCPG +  +   L SYR+ 
Sbjct: 243 ILSEELWHTSGHYDHYKENMYF------TSIDDAEYAIKPMNCPGAMLTYKRKLYSYRDF 296

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAE G V+R+E  G+LHGLMRVR FTQDDAH+F T + + +E  ++ + I  +Y  F
Sbjct: 297 PIRLAELGQVHRHELHGALHGLMRVRTFTQDDAHIFMTPDIVKDEIKRVVSFIDDVYNLF 356

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+  + +LSTRPE  +G+D  W+ A + ++  +  +        +  +  G+GAFYGPK
Sbjct: 357 GFKYHI-ELSTRPEDSMGTDEEWNHAIDSLEAAIKEMGK------DYVINEGDGAFYGPK 409

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++ L+D++GR WQCGTIQ+DF +P +F+  YV S  EK  P++IHR +FGSIERFIGI+
Sbjct: 410 LDFHLEDSLGRTWQCGTIQLDFQMPQKFDLTYVGSDGEKHRPIIIHRVIFGSIERFIGIL 469

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+F G  PLWL+P Q  + T+T   V YA++++  L  H + ++ D RNE I YK+R+ 
Sbjct: 470 IEHFAGKFPLWLAPEQVRLLTVTEKFVPYAEKVSKELAKHGIRVKVDARNEKIGYKLRQG 529

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
             +++  + + G++EA   ++ +R         +S+   I  L  E
Sbjct: 530 RNERVSYLAVIGEREAEADTLSVRSSKEGDLGSLSIDKFIDALCDE 575


>gi|317057674|ref|YP_004106141.1| threonyl-tRNA synthetase [Ruminococcus albus 7]
 gi|315449943|gb|ADU23507.1| threonyl-tRNA synthetase [Ruminococcus albus 7]
          Length = 648

 Score =  569 bits (1465), Expect = e-160,   Method: Composition-based stats.
 Identities = 211/651 (32%), Positives = 347/651 (53%), Gaps = 19/651 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IKLT  DGS++        S++ + I   L K A  V ING++ DL   +  +   E++
Sbjct: 1   MIKLTLKDGSVREIESAMPASEIIKGIGMGLYKAACVVKINGEIKDLRTVIDSDCEFEVL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +  +      H+ +H++A+AV++++P+ ++  GP  E+GFYYDF  E+PF+  +L +I
Sbjct: 61  TFDSKQGKETFWHTASHLLAQAVKNLYPDAKLGRGPATENGFYYDFKVEKPFAPADLEKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES-IPAKENVTLYRQGEWFD 181
           + +M+++        +  LS ++A +L E K E +KVE+++      E ++ Y+QG++ D
Sbjct: 121 QAEMKKLAKEGFELERFELSRDEAVKLMEEKGENFKVELIDKHDSKGEKLSFYKQGDFVD 180

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LC GPH+ S   +K   KL +  GAYW    +   +SRIYGTA+     L ++L  +EE+
Sbjct: 181 LCAGPHIMSVAPIK-AIKLTQCTGAYWGKAEDGIQMSRIYGTAYPKASMLEEHLKQMEEA 239

Query: 242 EKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQV 299
           + RDH KL RE++ F      G G+     KG K+ QTL  ++   + K  Y+   TP +
Sbjct: 240 KLRDHNKLGRELEYFTTVDYIGQGLPILLPKGAKVIQTLQRWIEDEEYKRGYQLTKTPFM 299

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             + L++ SGHWD YR  MF +   DD  K+   FAL+PM CP    VF +  +SYR+LP
Sbjct: 300 SKRELYKISGHWDHYRDGMFILGDPDDETKE--CFALRPMTCPFQYQVFLNRKRSYRDLP 357

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +RL E  +++RNE SG +HGL+RVR FT  + H+    EQ+  E     +L     +  G
Sbjct: 358 MRLGETSTLFRNEDSGEMHGLIRVRQFTISEGHLILRPEQLEEEFKGCLDLAKYCLETIG 417

Query: 420 FEKI------MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
             +           +    K  G+   W++A+  MK +LD I       ++  + + E A
Sbjct: 418 LAEDVSYRFSQWDPANPNNKYEGTAEQWEEAQGAMKKILDDIG------LDYEIGIDEAA 471

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  +K+  G++    TIQ+D  +  +F   YV+   +   P +IHR   G  ER
Sbjct: 472 FYGPKLDIQIKNVFGKEDTLITIQIDMQIAKKFGMEYVDKDGKMKMPYIIHRTSVGCYER 531

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
            + ++IE + G LPLWL+P Q  +  I     +YA ++A  ++   + +E D  ++ I  
Sbjct: 532 TLALLIEKYAGVLPLWLAPEQVRILPIKPEHNDYAYDLAEEMRDLGMRVEVDAEDDNIGP 591

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KI++    ++P + I GD E  + ++ +R         +   DAI  L +E
Sbjct: 592 KIKQARFDRVPYMFIIGDNEVKDGTVTVRSRKEGELPAMPAADAIAKLKEE 642


>gi|116492462|ref|YP_804197.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Pediococcus
           pentosaceus ATCC 25745]
 gi|122266074|sp|Q03GB7|SYT_PEDPA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|116102612|gb|ABJ67755.1| Ser-tRNA(Thr) hydrolase [Pediococcus pentosaceus ATCC 25745]
          Length = 648

 Score =  569 bits (1465), Expect = e-160,   Method: Composition-based stats.
 Identities = 225/651 (34%), Positives = 351/651 (53%), Gaps = 22/651 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           ++I + FPDGS+K F    +  D+A+SIS SLAKKAVA  ING +  L   + E   IEI
Sbjct: 2   TEINIEFPDGSVKPFEQGVSILDIAKSISTSLAKKAVAGKINGALVRLDQAINENVKIEI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELA 120
           +T +      V  +S A ++  A++SI+P V        E GFY D DK +Q  S D+L 
Sbjct: 62  VTKDSEDGNIVNWNSAALVLTSAIESIYPGVHFGEIGNGEHGFYVDTDKVDQQISVDQLP 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IE KM++II          +S E+A    +   + Y+ +I++       V++Y      
Sbjct: 122 AIEDKMKDIIKSKISLKHSEISVEEALASVD--GDPYQAKIVKRNEKNGKVSVYDVDGKI 179

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
            +     + ST  +K   KL+ VAGAYW G S+ PML RIYGT++  Q++L   L   +E
Sbjct: 180 IVSDNVALLSTSDMK-AVKLLSVAGAYWEGKSSNPMLQRIYGTSFYKQKDLEAELERQKE 238

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           + +RDHR +   +DLF +      G+ +W   G  I +++  Y+  +++K  Y+ + TP 
Sbjct: 239 AHERDHRVIGNNLDLFFVDPKVGAGLPYWMPNGATIRRSIERYIIDKEVKHGYQHVYTPV 298

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +++   ++ SGHW  YR +MF          D     L+PMNCP H+ V+ H ++SYREL
Sbjct: 299 LMNLDAYKTSGHWQHYREDMFPPMDMG----DGEMLELRPMNCPSHIQVYKHHIRSYREL 354

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  T +D H F   +Q+  E  K+  L++ +Y+DF
Sbjct: 355 PIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVAPDQIQAEFKKVLQLMVEVYRDF 414

Query: 419 GFEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
                  +LS R      K    D +W+ +++++K  +D +       ++     GE AF
Sbjct: 415 NITDYTFRLSYRDPANTEKYFDDDEMWNKSQSMLKAAMDDLG------LDYVEAEGEAAF 468

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +   K A+G +    TIQ+DF LP +F+  YV +  E+  PVMIHR +  ++ERF
Sbjct: 469 YGPKLDVQTKTALGNEETLSTIQLDFMLPKQFDLHYVGADGEEHRPVMIHRGLVSTMERF 528

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINY 593
              +IE +KG  P WL+P Q  +  +       YA ++   +    + +E D RNE + Y
Sbjct: 529 TAYLIEMYKGAFPTWLAPKQVTIIPVKDDLHGAYADKLREEMVDKDIRVEVDHRNEKMGY 588

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIRE   +KIP I++ GD E    S+ +R +G   ++  +  D I  + +E
Sbjct: 589 KIREAQTQKIPYILVVGDNELENNSVSVRHYGEDDSKNEASADFINNIVRE 639


>gi|62078811|ref|NP_001014062.1| threonyl-tRNA synthetase, mitochondrial precursor [Rattus
           norvegicus]
 gi|81884372|sp|Q68FW7|SYTM_RAT RecName: Full=Threonyl-tRNA synthetase, mitochondrial; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS; AltName:
           Full=Threonyl-tRNA synthetase-like 1; Flags: Precursor
 gi|51259375|gb|AAH79154.1| Threonyl-tRNA synthetase 2, mitochondrial (putative) [Rattus
           norvegicus]
          Length = 723

 Score =  569 bits (1465), Expect = e-160,   Method: Composition-based stats.
 Identities = 229/667 (34%), Positives = 355/667 (53%), Gaps = 30/667 (4%)

Query: 5   IKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           IK++ P+G  +     + T   +A+ IS +LA  AVA  +NG++ DL  P+  +  +  +
Sbjct: 66  IKISLPEGQKVDAVAWNTTPYQLAQQISSTLADTAVAAEVNGELYDLDRPLETDCHLRFL 125

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD--KEQPFSSDELA 120
           T + P   AV   S AH++  A +       +  GP  E GFY DF   KE+   S EL 
Sbjct: 126 TFDSPEGKAVFWRSSAHVLGAAAEQHL-GAVLCRGPSTESGFYLDFFLGKERTVRSTELP 184

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            +E+  QEII    PF +   S  + R+LF+     +K+ ++E        T+Y  G   
Sbjct: 185 TLERICQEIITAAQPFRRLEASRGQLRQLFKDNH--FKLHVIEEKVTGTTATVYGCGMSV 242

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLC+GPH+R TGQ+    KL+  + A WR       L R+ G ++   + L  +    EE
Sbjct: 243 DLCQGPHLRHTGQIG-ALKLLTNSSALWRSSEAPETLQRVSGISFPKAELLRNWEARREE 301

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQV 299
           +E RDHR++ +E +LF   E   G  F+  +G +I+  L++++R +  +  + E+ TP +
Sbjct: 302 AELRDHRRIGKEQELFFFHELSPGSCFFLPRGTRIYNALVAFIRAEYARRGFSEVKTPTL 361

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKD-----------LRTFALKPMNCPGHVAVF 348
               LW+QSGHW+ YRA+MF++K       D             T ALKPMNCP H  +F
Sbjct: 362 FSTKLWEQSGHWEHYRAHMFSLKPPGTDGVDSSQSGHPARCPKDTLALKPMNCPAHCLMF 421

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
            H  +S+RELPVRLA+FG ++R E SGSL GL R+  F QDDAH+FC   Q+  E     
Sbjct: 422 AHRPRSWRELPVRLADFGVLHRAEASGSLGGLTRLWRFQQDDAHIFCAPSQLEAEIRGCL 481

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
           + + S+Y   GF   +  LSTRP   +G   LWD AE +++  L+             + 
Sbjct: 482 DFLRSVYSVLGFSFHLA-LSTRPPGFLGEPHLWDQAEKVLQQALEEFGEPWN------LN 534

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
            G+GAFYGPK +  L DA+GR  QCGTIQ+DF LP RF+  Y         PV+IHRAV 
Sbjct: 535 PGDGAFYGPKIDVHLHDALGRPHQCGTIQLDFQLPLRFDLQYKGPAGAPECPVLIHRAVL 594

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FR 587
           GS+ER +G++ E+  G  PLWLSP Q +V  + +   +YA+++   L++  L  + D   
Sbjct: 595 GSVERLLGVLAESCGGRWPLWLSPFQVVVIPVRTEQEDYARQVQQCLQAAGLVSDLDADC 654

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK--ES 645
             T++ ++R   +       + G +E S+ S+ +R   +    +  L +++  L +  ++
Sbjct: 655 GLTLSRRVRRAQLAHYNFQFVVGQREQSQMSVNVRTRDNRQLGERGLAESVQRLLELQDA 714

Query: 646 LPPDCQK 652
             P+ ++
Sbjct: 715 RVPNAEE 721


>gi|68491354|ref|XP_710514.1| hypothetical protein CaO19.5685 [Candida albicans SC5314]
 gi|46431727|gb|EAK91259.1| hypothetical protein CaO19.5685 [Candida albicans SC5314]
          Length = 706

 Score =  568 bits (1464), Expect = e-160,   Method: Composition-based stats.
 Identities = 236/650 (36%), Positives = 358/650 (55%), Gaps = 25/650 (3%)

Query: 4   DIKLTFPDGSIKN-FPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
            IK+T  DG+IK       +  D+A SI +S A++ V   ++GK+ D+  P+  +  +E 
Sbjct: 58  PIKITLRDGTIKEGTAYETSPMDIANSIGKSFAERQVIAKVDGKLWDMPRPLEGDVKLEF 117

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF---DKEQPFSSDE 118
           +  E P   AV  HS AHI+ EA +  +    ++ GP  EDGF+YD    + E   +  +
Sbjct: 118 LDFEHPEGKAVFWHSSAHILGEACECHY-GCHLSHGPPTEDGFFYDMSINNGETFVTQAD 176

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
              +E+   + I     F +  ++ E+  ++F   K   K  I + IP   + T+YR G 
Sbjct: 177 FGNLEQVATKAIKEKQKFERLEMTKEQLLKMFHYNKYKVKF-ISDKIPDGTSTTVYRCGP 235

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLC GPH+  +G++K F K++K + +Y+ GD+    L R+YG ++  ++ +T++L FL
Sbjct: 236 LIDLCVGPHIPHSGRIKAF-KVLKNSSSYFLGDATNDSLQRVYGISFPDKKLMTEHLKFL 294

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
            E+ +RDHRK+ RE +LF   E   G   W   G +I+ TL+  +R + +   YEE+ TP
Sbjct: 295 AEAAERDHRKIGREQELFIFNEMSPGSAMWLPHGARIYNTLVDTLRTEYRKRGYEEVITP 354

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW+ SGHW +Y+ NMF+ +       +  TF LKPMNCPGH  +F    +SYRE
Sbjct: 355 NMYSTKLWETSGHWQNYKENMFSFEV------EKETFGLKPMNCPGHCILFKSRERSYRE 408

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP R+A+FG ++RNE SG+L GL RVR F QDDAH+FCT +Q+  E   + + +  +Y  
Sbjct: 409 LPWRVADFGVIHRNEFSGALSGLTRVRRFQQDDAHIFCTTDQIGTEIAGVFDFLKKMYGI 468

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFE  M +LSTRPEK VG    W+ AE  ++  L+      +  +N     G+GAFYGP
Sbjct: 469 FGFEFKM-ELSTRPEKYVGDLDTWNSAEKKLEQALNDFLGEGKWELN----PGDGAFYGP 523

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K + ++ DA+ R +QC TIQ+DF LP RF   Y +       PVMIHRA+ GS+ER   I
Sbjct: 524 KIDIMISDALKRWFQCATIQLDFQLPQRFELEYKSDKGPNTRPVMIHRAILGSVERMTAI 583

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH-LSIETDFRNETINYKIR 596
           + E++KG  P WLSP Q ++  +     +YAQ++   L   +    + D    T+  KIR
Sbjct: 584 LTEHYKGKWPFWLSPRQILIVPVGPKYYDYAQKLQKKLNDDYFFYCDVDVSGNTLPKKIR 643

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK----VSLLDAIPILT 642
              + K   I I G++E +  S+ +R       Q     V   D +  L 
Sbjct: 644 TGQMYKYNFIFIVGEEEENSESVNVRNRDIPEEQGKNAMVGFDDVVKQLV 693


>gi|294786915|ref|ZP_06752169.1| threonine--tRNA ligase [Parascardovia denticolens F0305]
 gi|315226550|ref|ZP_07868338.1| threonine--tRNA ligase [Parascardovia denticolens DSM 10105]
 gi|294485748|gb|EFG33382.1| threonine--tRNA ligase [Parascardovia denticolens F0305]
 gi|315120682|gb|EFT83814.1| threonine--tRNA ligase [Parascardovia denticolens DSM 10105]
          Length = 687

 Score =  568 bits (1464), Expect = e-160,   Method: Composition-based stats.
 Identities = 260/670 (38%), Positives = 388/670 (57%), Gaps = 43/670 (6%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IE 60
           PS I +T  +G  +      TG ++ ES      K  +AV ING   DL  P+  G  +E
Sbjct: 5   PSLIPITV-NGEHREVEDTTTGVELFES-----DKNIIAVRINGHPRDLYAPLHAGDKVE 58

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            I  +    LA++RHS  H+MA+AVQ I+P+ ++ IGP+I++GFYYDFD E+PF+ ++L 
Sbjct: 59  SIALDSEDGLAIMRHSATHVMAQAVQEIYPDAKLGIGPVIDNGFYYDFDVERPFTPEDLK 118

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-----------ESIPAKE 169
           +IEK+MQ II     F ++ +S E AR+  E   + YK+E++           ++  ++ 
Sbjct: 119 EIEKRMQRIIKSSQSFRRRVVSEEAARQ--EEADQPYKLELICSAENAIDQGKDTGVSQG 176

Query: 170 NVTLY----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
            +++Y    R+G+  W DLC GPH+ +T  +K F KL + AGAYWRG    PML RIYGT
Sbjct: 177 QLSMYDNMDREGKVVWTDLCHGPHLPNTRYIKAF-KLERTAGAYWRGSEKNPMLQRIYGT 235

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISY 282
           AW +++++  YL  LEE+ KRDHRKL  EMDLF   ++ G G+  +H KG  +   +  Y
Sbjct: 236 AWASKEDMKAYLARLEEAAKRDHRKLGAEMDLFSFPDEIGPGLAVFHPKGAAVINAMKEY 295

Query: 283 MR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT-------IKDLRTF 334
            R +  K+ Y  + TP +    L++ SGH   Y+  M+     D+        I++   +
Sbjct: 296 SRLQHRKNHYSFVQTPHITKGGLYETSGHLQWYKDGMYPPMRLDEERDENGNVIREGFDY 355

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
            LKPMNCP H  +F    +SYRELP+RL EFG+VYR E SG +HGL RVRG TQDD+H++
Sbjct: 356 YLKPMNCPMHNLIFKSRQRSYRELPLRLFEFGTVYRYEKSGVVHGLTRVRGLTQDDSHIY 415

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLD 453
           CT+EQM +E   + N ++ + KDFG     ++LST+ E   VGSD +W++A   +  V  
Sbjct: 416 CTREQMRDELKSLLNFVLQLLKDFGLNDFYLELSTKDEHKFVGSDEIWEEATKTLADVAK 475

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS 513
                 +  +      G  AFYGPK     +DA+GR WQ  TIQ+DFNLP RF   Y+ +
Sbjct: 476 ------ESGLELVDDPGGAAFYGPKISVQARDALGRTWQVSTIQLDFNLPERFQLEYIAA 529

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIAN 573
              +  PVMIHRA+FGSIERF  I++E++ G  P WL+P Q +   +  S+++Y +E+ +
Sbjct: 530 DGSRQRPVMIHRALFGSIERFFAILLEHYAGAFPAWLAPTQVLGVPVADSSLDYLKEVLD 589

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            L  + +  E D  ++    KIR  S  K+P I+I GD++  + ++  R    +    V 
Sbjct: 590 RLDENLVRTELDASDDRFGKKIRNASKSKVPFILIVGDEDREKGAVSFRFRDGSQLNGVP 649

Query: 634 LLDAIPILTK 643
              AI  +T+
Sbjct: 650 ADQAIAWITE 659


>gi|302339715|ref|YP_003804921.1| threonyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
 gi|301636900|gb|ADK82327.1| threonyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
          Length = 585

 Score =  568 bits (1464), Expect = e-160,   Method: Composition-based stats.
 Identities = 260/580 (44%), Positives = 358/580 (61%), Gaps = 14/580 (2%)

Query: 67  PRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKM 126
              L  IRHS AH+MAEAV  ++P  +VAIGP IE+GFYYDFD  +P ++D+L +I  KM
Sbjct: 9   EEKLHRIRHSMAHVMAEAVVDLFPGTKVAIGPAIENGFYYDFDFPKPLANDDLEKISAKM 68

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGP 186
           ++II    PF ++ +S E+A +LF  K E YKVE+L++IP  E V+LY Q  + DLCRGP
Sbjct: 69  KDIIKGKHPFQRKVISREEAEKLFSGKGEQYKVELLKAIPEGEEVSLYSQDSFTDLCRGP 128

Query: 187 HVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           HV +T  +  + FKL+ +AGAYWRG    PML+RIYGTAW   +EL  YL  LEE EKRD
Sbjct: 129 HVENTADLNAEAFKLLSIAGAYWRGKETNPMLTRIYGTAWENPKELRLYLKHLEEMEKRD 188

Query: 246 HRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQH 303
           HRKL RE+DLF + E+ G G+++WH KG +I   + ++ +    K+ YE + TP V    
Sbjct: 189 HRKLGRELDLFSLHEEAGPGLVYWHPKGARIRHQIETFWKDEHFKNGYELLYTPHVGKSW 248

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+ SGH D Y   M+          D   +  KPMNCP H+ ++     SYRELP R A
Sbjct: 249 LWETSGHLDFYAEGMYPEMVM-----DKANYYAKPMNCPFHIMIYKTNKHSYRELPFRWA 303

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           E G+VYR E SG+LHGLMRVRGFTQDDAH+FCT EQ+ +E L++    + + + FGF  I
Sbjct: 304 ELGTVYRYEKSGTLHGLMRVRGFTQDDAHIFCTPEQVEDEILEVLRFSLHMLRAFGFSDI 363

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
              LSTRPEK VG    W  AE  ++  ++       + +   V  G GAFYGPK +  +
Sbjct: 364 QAYLSTRPEKAVGDPEQWKLAEASLQKAIEA------EGLAYEVDEGGGAFYGPKIDLKV 417

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           KDA+GR WQ  T+Q DFN P RF   +V+   ++  P M+HRA+ GSIERF G++IE++ 
Sbjct: 418 KDALGRSWQLSTVQFDFNEPKRFGMTFVDHDGKEKQPYMVHRALLGSIERFFGVLIEHYG 477

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P+WLSP+Q  V  +  +   YA+ +   L+ H L  + D  +  +N KIR    +KI
Sbjct: 478 GAFPVWLSPVQVQVIPVAPAFEAYAKSVETELRRHDLRADVDLSDSRMNAKIRNAQKEKI 537

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           P ++I G+KE   RS+ +R+        ++L + I    K
Sbjct: 538 PYMLILGEKEQESRSVSVRKRNGEQVNGLALDEFIAQTLK 577


>gi|304389414|ref|ZP_07371377.1| threonine--tRNA ligase [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
 gi|304327224|gb|EFL94459.1| threonine--tRNA ligase [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
          Length = 669

 Score =  568 bits (1464), Expect = e-160,   Method: Composition-based stats.
 Identities = 252/674 (37%), Positives = 376/674 (55%), Gaps = 47/674 (6%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           S+I +T  DG         TG D+         K+ +A  ING+  DL   + +G ++E 
Sbjct: 2   SEINVTI-DGKATQIESTITGEDLYRD-----RKEVIAYFINGQARDLYRELHDGDTVEA 55

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           IT +    L ++RHSC H+MA+AV+ + P V+  IGP IE+GFYYDF  ++PF+ ++L  
Sbjct: 56  ITIDSEMGLNILRHSCTHVMAQAVKQVRPNVKYGIGPFIENGFYYDFGVDEPFTPEDLKA 115

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL------------------- 162
           IEK M  I   D  F+++ ++ ++ R   E   + YK+E++                   
Sbjct: 116 IEKYMARICKEDQKFVRRVVTEDEGRA--ELADQPYKLELIGLKGTDSDNDQAAAGASVE 173

Query: 163 ---ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSR 219
                +   +NV    +  W DLCRGPHV ST  +   FKLMKV+ AYWRGD     L R
Sbjct: 174 VGGNELTIYDNVRKNGEVAWKDLCRGPHVPSTRLLNGVFKLMKVSAAYWRGDQANDSLQR 233

Query: 220 IYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQT 278
           IYGTAW T+ +L +Y+  + E+ KRDHR+L  E+DLF   E+ GSG+  +H KG  +   
Sbjct: 234 IYGTAWATKDDLKEYVTRMAEAAKRDHRRLGNELDLFSFPEEIGSGLAVFHPKGAMVRME 293

Query: 279 LISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT-------IKD 330
           + +Y RR  +++ Y  + TP V    L++ SGH + Y+  MF     D+         K+
Sbjct: 294 MENYSRRRHLEEGYSFVYTPHVTKGQLFETSGHLEWYKDGMFPPMRVDEECDDQGNVTKE 353

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
              + LKPMNCP H  ++    +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDD
Sbjct: 354 GFDYYLKPMNCPMHNLIYKSRSRSYRELPLRLFEFGTVYRYEKSGVVHGLTRGRGFTQDD 413

Query: 391 AHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMK 449
           +H++CT+EQM +E  K+   ++ + KD+G +   ++LST+     VGSD +W++A N + 
Sbjct: 414 SHIYCTREQMKDELTKLLTFVLDLLKDYGLDDFYLELSTKNPHKFVGSDEIWEEATNTLA 473

Query: 450 GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAF 509
            V           +         AFYGPK     +DAIGR WQ  TIQ+DFNLP RF+  
Sbjct: 474 EVATASG------LELVPDPEGAAFYGPKISVQARDAIGRTWQMSTIQLDFNLPERFDLE 527

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQ 569
           Y  +   +  PVMIHRA+FGSIERF G++ E++ G  P WL+P+Q  +  +  +  +Y +
Sbjct: 528 YTAADGSRQRPVMIHRALFGSIERFFGVLTEHYAGAFPAWLAPVQVRLVPVAEAFNDYCE 587

Query: 570 EIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           +IAN L++ ++ +E D  ++    KIR  +  KIP  +I G ++A   ++  R  G    
Sbjct: 588 DIANRLRAENVRVEVDTTDDRFGKKIRNAAKDKIPFTLIAGGEDAEANAVSFRYRGGEQK 647

Query: 630 QKVSLLDAIPILTK 643
             V +  AI  + +
Sbjct: 648 NGVPIDQAIAEILE 661


>gi|297748711|gb|ADI51257.1| Threonyl-tRNA synthetase [Chlamydia trachomatis D-EC]
 gi|297749591|gb|ADI52269.1| Threonyl-tRNA synthetase [Chlamydia trachomatis D-LC]
          Length = 660

 Score =  568 bits (1464), Expect = e-159,   Method: Composition-based stats.
 Identities = 243/631 (38%), Positives = 366/631 (58%), Gaps = 19/631 (3%)

Query: 16  NFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIR 74
             P  A+  D+A  + +S         IN +  DLS  +++G ++  +T +DP+   +  
Sbjct: 37  ELPEGASAMDLANKMKQSHCFA--GALINDQEKDLSTTLQDGDTVLFLTWDDPKGREIFL 94

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDS 134
           H+ AHI+A+AV  +WP  Q  IGP+I+ GFYYDF      S ++   IE   + I     
Sbjct: 95  HTSAHILAQAVLRLWPSAQPTIGPVIDQGFYYDFA-NLSISEEDFPAIEAMAKTIAEEKF 153

Query: 135 PFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQV 194
           P  +Q    ++A  L    +  +K E++  +P +  ++ Y QGE+ DLCRGPH+ ST  V
Sbjct: 154 PISRQVFPDKEA-ALAYFSQNPFKAELIAELPEEVEISAYTQGEFLDLCRGPHLPSTAPV 212

Query: 195 KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMD 254
           K F KL++ + AYW+GD +R  L RIYG ++ T +EL ++L+ LEE++KRDHR L  ++D
Sbjct: 213 KAF-KLLRTSSAYWKGDPSRESLIRIYGVSFPTTKELKEHLHQLEEAKKRDHRVLGTKLD 271

Query: 255 LFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDS 313
           LF      +G+ F+H +G  ++  L+ Y +R   +  Y++I TPQ++++ LW+ SGHW++
Sbjct: 272 LFSQQTCSAGMPFFHPRGMVVWNALVDYWKRLHQRAGYQQIQTPQLMNRELWEISGHWEN 331

Query: 314 YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP 373
           Y+ NM+ +        D   +A+KPMNCPG +  +   L SYRE P+R+AE G V+R+E 
Sbjct: 332 YKENMYTLTV------DEEDYAIKPMNCPGCMLYYKTQLHSYREFPLRIAEIGHVHRHEL 385

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
           SG+L GLMRVR F QDDAHVF T EQ+  E L I NL+  +Y  FG E  +   +   + 
Sbjct: 386 SGALSGLMRVRTFHQDDAHVFLTPEQVEEETLNILNLVSELYGTFGLEYHLELSTRPEQG 445

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
            +GSD LW+ A   +K  L   +          +  GEGAFYGPK +  +KDAI R WQC
Sbjct: 446 TIGSDDLWELATKALKRALVKSQKP------FIISPGEGAFYGPKIDIHVKDAINRTWQC 499

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI 553
           GTIQ+D  LP RF+  Y N+  EK  P+M+HRA+FGSIERF+GI+IE+FKG  PLWLSP 
Sbjct: 500 GTIQLDMFLPERFDLKYTNAQGEKSTPIMLHRALFGSIERFLGILIEHFKGRFPLWLSPE 559

Query: 554 QAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
              + T+       AQE+A       + +  D  NE+++ KIR     ++  +I  GDKE
Sbjct: 560 HVRIITVADRHEARAQELAKHFSQMGIIVSVDSSNESVSKKIRNAQNMQVNYMITIGDKE 619

Query: 614 ASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
                + +R   +     +++     ++ +E
Sbjct: 620 LETHLLAVRTRDNRVLNDIAVEQFSHVILEE 650


>gi|320167861|gb|EFW44760.1| threonyl-tRNA synthetase [Capsaspora owczarzaki ATCC 30864]
          Length = 726

 Score =  568 bits (1463), Expect = e-159,   Method: Composition-based stats.
 Identities = 230/651 (35%), Positives = 344/651 (52%), Gaps = 27/651 (4%)

Query: 2   PSDIKLT--FPDGS--IKNF-PVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR- 55
           P  I++T     G   +K      +T   +AE++ ++     +   +NG+V DL   +  
Sbjct: 70  PVAIQVTVLLNAGKQEVKEAQSWRSTPQSIAETMFKN-TDHIIIAKVNGEVFDLDRVLEA 128

Query: 56  EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPF 114
           +  +E +T ED  + AV  HS AH++ E+++  +    +  GP I++GFYYD   E +  
Sbjct: 129 DCKLEFLTWEDDEAKAVFWHSSAHMLGESLELQYGGC-LCYGPPIDEGFYYDMHLENRTV 187

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
              E   I K  + I      F +  LS     E+F+     +K  I+      +  T+Y
Sbjct: 188 LPGEFGNINKLTERIAKEKQQFERLELSKADLLEMFKY--NTFKQRIINERVTTDRTTVY 245

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
           R G   DLCRGPHVR TG+VK F  + K + +YW G ++   L R+YG ++   + +  +
Sbjct: 246 RCGPLIDLCRGPHVRHTGKVKSF-AVTKSSASYWEGKADAETLQRVYGVSFPDVKMMKDW 304

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEE 293
             F  E+ KRDHRKL  E  LF   E   G  F+   G +I+ TL+ ++R +     + E
Sbjct: 305 EKFQLEAAKRDHRKLGTEQSLFFFHELSPGSCFFLPHGTRIYNTLMEFIRSEYWARGFTE 364

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           + TP + +  LWQQSGHW  Y  NMF+         +   FALKPMNCPGH  +F+   +
Sbjct: 365 VITPNMYNSKLWQQSGHWQHYAENMFSF------DIEKEKFALKPMNCPGHCLMFDQAFR 418

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           S++ELP+R A+FG ++RNE SG+L GL RVR F QDDAH+FC    + NE       + +
Sbjct: 419 SHKELPIRFADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCKPSDIANEIDNALAFLKA 478

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           +Y  FGF   + KLSTRPE  +G  ALWD AE  ++  L+      +      +  G+GA
Sbjct: 479 VYTVFGFTFQL-KLSTRPEGFLGDIALWDKAEKQLEESLNKFGAPWK------LNPGDGA 531

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  + DA+ R  QC TIQ+DF LP RF   Y      +  PV+IHRA+ GS+ER
Sbjct: 532 FYGPKIDITIMDALRRSHQCATIQLDFQLPIRFGLKYQAPDGTEQTPVIIHRAILGSVER 591

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF-RNETIN 592
            I I+ ENF G  P WLSP QA+V  ++    +YA E+   L      ++ D   +ET+N
Sbjct: 592 MIAILTENFAGKWPFWLSPRQALVIAVSKDCNDYAHEVQKQLHDAGFHVDYDLWPDETLN 651

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            K+R   + +   I++ G +E   RS  +R   +    + ++   I   T+
Sbjct: 652 KKVRNAQLAQYNFILVVGARERESRSANVRTRDNKVHGERTIPQLIAEFTE 702


>gi|15605310|ref|NP_220096.1| threonyl-tRNA synthetase [Chlamydia trachomatis D/UW-3/CX]
 gi|76789318|ref|YP_328404.1| threonyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13]
 gi|237803010|ref|YP_002888204.1| threonyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT]
 gi|237804932|ref|YP_002889086.1| threonyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|255311401|ref|ZP_05353971.1| threonyl-tRNA synthetase [Chlamydia trachomatis 6276]
 gi|255317702|ref|ZP_05358948.1| threonyl-tRNA synthetase [Chlamydia trachomatis 6276s]
 gi|255348963|ref|ZP_05380970.1| threonyl-tRNA synthetase [Chlamydia trachomatis 70]
 gi|255503502|ref|ZP_05381892.1| threonyl-tRNA synthetase [Chlamydia trachomatis 70s]
 gi|7388284|sp|O84585|SYT_CHLTR RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|123731247|sp|Q3KLB6|SYT_CHLTA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|6578108|gb|AAC68183.2| Threonyl tRNA Synthetase [Chlamydia trachomatis D/UW-3/CX]
 gi|76167848|gb|AAX50856.1| threonyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13]
 gi|231273232|emb|CAX10145.1| threonyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|231274244|emb|CAX11038.1| threonyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT]
 gi|296436115|gb|ADH18289.1| threonyl-tRNA synthetase [Chlamydia trachomatis G/9768]
 gi|296437044|gb|ADH19214.1| threonyl-tRNA synthetase [Chlamydia trachomatis G/11222]
 gi|296437975|gb|ADH20136.1| threonyl-tRNA synthetase [Chlamydia trachomatis G/11074]
 gi|297140477|gb|ADH97235.1| threonyl-tRNA synthetase [Chlamydia trachomatis G/9301]
          Length = 635

 Score =  568 bits (1463), Expect = e-159,   Method: Composition-based stats.
 Identities = 243/631 (38%), Positives = 366/631 (58%), Gaps = 19/631 (3%)

Query: 16  NFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIR 74
             P  A+  D+A  + +S         IN +  DLS  +++G ++  +T +DP+   +  
Sbjct: 12  ELPEGASAMDLANKMKQSHCFA--GALINDQEKDLSTTLQDGDTVLFLTWDDPKGREIFL 69

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDS 134
           H+ AHI+A+AV  +WP  Q  IGP+I+ GFYYDF      S ++   IE   + I     
Sbjct: 70  HTSAHILAQAVLRLWPSAQPTIGPVIDQGFYYDFA-NLSISEEDFPAIEAMAKTIAEEKF 128

Query: 135 PFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQV 194
           P  +Q    ++A  L    +  +K E++  +P +  ++ Y QGE+ DLCRGPH+ ST  V
Sbjct: 129 PISRQVFPDKEA-ALAYFSQNPFKAELIAELPEEVEISAYTQGEFLDLCRGPHLPSTAPV 187

Query: 195 KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMD 254
           K F KL++ + AYW+GD +R  L RIYG ++ T +EL ++L+ LEE++KRDHR L  ++D
Sbjct: 188 KAF-KLLRTSSAYWKGDPSRESLIRIYGVSFPTTKELKEHLHQLEEAKKRDHRVLGTKLD 246

Query: 255 LFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDS 313
           LF      +G+ F+H +G  ++  L+ Y +R   +  Y++I TPQ++++ LW+ SGHW++
Sbjct: 247 LFSQQTCSAGMPFFHPRGMVVWNALVDYWKRLHQRAGYQQIQTPQLMNRELWEISGHWEN 306

Query: 314 YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP 373
           Y+ NM+ +        D   +A+KPMNCPG +  +   L SYRE P+R+AE G V+R+E 
Sbjct: 307 YKENMYTLTV------DEEDYAIKPMNCPGCMLYYKTQLHSYREFPLRIAEIGHVHRHEL 360

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
           SG+L GLMRVR F QDDAHVF T EQ+  E L I NL+  +Y  FG E  +   +   + 
Sbjct: 361 SGALSGLMRVRTFHQDDAHVFLTPEQVEEETLNILNLVSELYGTFGLEYHLELSTRPEQG 420

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
            +GSD LW+ A   +K  L   +          +  GEGAFYGPK +  +KDAI R WQC
Sbjct: 421 TIGSDDLWELATKALKRALVKSQKP------FIISPGEGAFYGPKIDIHVKDAINRTWQC 474

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI 553
           GTIQ+D  LP RF+  Y N+  EK  P+M+HRA+FGSIERF+GI+IE+FKG  PLWLSP 
Sbjct: 475 GTIQLDMFLPERFDLKYTNAQGEKSTPIMLHRALFGSIERFLGILIEHFKGRFPLWLSPE 534

Query: 554 QAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
              + T+       AQE+A       + +  D  NE+++ KIR     ++  +I  GDKE
Sbjct: 535 HVRIITVADRHEARAQELAKHFSQMGIIVSVDSSNESVSKKIRNAQNMQVNYMITIGDKE 594

Query: 614 ASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
                + +R   +     +++     ++ +E
Sbjct: 595 LETHLLAVRTRDNRVLNDIAVEQFSHVILEE 625


>gi|298346881|ref|YP_003719568.1| threonyl-tRNA synthetase [Mobiluncus curtisii ATCC 43063]
 gi|298236942|gb|ADI68074.1| threonyl-tRNA synthetase [Mobiluncus curtisii ATCC 43063]
          Length = 669

 Score =  568 bits (1463), Expect = e-159,   Method: Composition-based stats.
 Identities = 253/674 (37%), Positives = 377/674 (55%), Gaps = 47/674 (6%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           S+I +T  DG         TG D+         K+ +A  ING+  DL   + +G ++E 
Sbjct: 2   SEINVTI-DGKATQIESTITGEDLYRD-----RKEVIAYFINGQARDLYRELHDGDTVEA 55

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           IT +    L ++RHSC H+MA+AV+ + P V+  IGP IE+GFYYDF  ++PF+ ++L  
Sbjct: 56  ITIDSEMGLNILRHSCTHVMAQAVKQVRPNVKYGIGPFIENGFYYDFGVDEPFTPEDLKA 115

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL------------------- 162
           IEK M  I   D  F+++ ++ ++ R   E   + YK+E++                   
Sbjct: 116 IEKYMARICKEDQKFVRRVVTEDEGRA--ELADQPYKLELIGLKGTDSDNDQAAAGASVE 173

Query: 163 ---ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSR 219
                +   +NV    +  W DLCRGPHV ST  +   FKLMKV+ AYWRGD     L R
Sbjct: 174 VGGSELTIYDNVRNNGEVAWKDLCRGPHVPSTRLLNGVFKLMKVSAAYWRGDQANDSLQR 233

Query: 220 IYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQT 278
           IYGTAW T+ +L +Y+  +EE+ KRDHR+L  E+DLF   E+ GSG+  +H KG  +   
Sbjct: 234 IYGTAWATKDDLKEYVTRMEEAAKRDHRRLGNELDLFSFPEEIGSGLAVFHPKGAMVRME 293

Query: 279 LISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT-------IKD 330
           + +Y RR  +++ Y  + TP V    L++ SGH + Y+  MF     D+         K+
Sbjct: 294 MENYSRRRHLEEGYSFVYTPHVTKGQLFETSGHLEWYKDGMFPPMRVDEECDDQGNVTKE 353

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
              + LKPMNCP H  ++    +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDD
Sbjct: 354 GFDYYLKPMNCPMHNLIYKSRSRSYRELPLRLFEFGTVYRYEKSGVVHGLTRGRGFTQDD 413

Query: 391 AHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMK 449
           +H++CT+EQM +E  K+   ++ + KD+G +   ++LST+     VGSD +W++A N + 
Sbjct: 414 SHIYCTREQMKDELTKLLTFVLDLLKDYGLDDFYLELSTKNPHKFVGSDEIWEEATNTLA 473

Query: 450 GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAF 509
            V           +         AFYGPK     +DAIGR WQ  TIQ+DFNLP RF+  
Sbjct: 474 EVATASG------LELVPDPEGAAFYGPKISVQARDAIGRTWQMSTIQLDFNLPERFDLE 527

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQ 569
           Y  +   +  PVMIHRA+FGSIERF G++ E++ G  P WL+P+Q  +  +  +  +Y +
Sbjct: 528 YTAADGSRQRPVMIHRALFGSIERFFGVLTEHYAGAFPAWLAPVQVRLVPVAEAFNDYCE 587

Query: 570 EIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           +IAN L++ ++ +E D  ++    KIR  +  KIP  +I G ++A   ++  R  G    
Sbjct: 588 DIANRLRAENVRVEVDTTDDRFGKKIRNAAKDKIPFTLIAGGEDAEANAVSFRYRGGEQK 647

Query: 630 QKVSLLDAIPILTK 643
             V +  AI  + +
Sbjct: 648 NGVPIDQAIAEILE 661


>gi|315655426|ref|ZP_07908326.1| threonine--tRNA ligase [Mobiluncus curtisii ATCC 51333]
 gi|315490366|gb|EFU79991.1| threonine--tRNA ligase [Mobiluncus curtisii ATCC 51333]
          Length = 669

 Score =  568 bits (1463), Expect = e-159,   Method: Composition-based stats.
 Identities = 254/674 (37%), Positives = 376/674 (55%), Gaps = 47/674 (6%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           S+I +T  DG         TG D+         K+ +A  ING+  DL   + +G ++E 
Sbjct: 2   SEINVTI-DGKATQIESTITGEDLYRD-----RKEVIAYFINGQPRDLYRELHDGDTVEA 55

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           IT +    L ++RHSC H+MA+AV+ + P V+  IGP IE+GFYYDF  ++PF+ ++L  
Sbjct: 56  ITIDSEMGLNILRHSCTHVMAQAVKQVRPNVKYGIGPFIENGFYYDFGVDEPFTPEDLKA 115

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL------------------- 162
           IEK M  I   D  F+++ ++ E+ R   E   + YK+E++                   
Sbjct: 116 IEKYMARICKEDQKFVRRVVTEEEGRA--ELADQPYKLELIGLKGTDSDNDQAAAGASVE 173

Query: 163 ---ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSR 219
                +   +NV    +  W DLCRGPHV ST  +   FKLMKV+ AYWRGD     L R
Sbjct: 174 VGGNELTIYDNVRKNGEVAWKDLCRGPHVPSTRLLNGVFKLMKVSAAYWRGDQANDSLQR 233

Query: 220 IYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQT 278
           IYGTAW T+ +L +Y+  +EE+ KRDHR+L  E+DLF   E+ GSG+  +H KG  +   
Sbjct: 234 IYGTAWATKDDLKEYVTRMEEAAKRDHRRLGNELDLFSFPEEIGSGLAVFHPKGAMVRME 293

Query: 279 LISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT-------IKD 330
           + +Y RR  +++ Y  + TP V    L++ SGH + Y+  MF     D+         K+
Sbjct: 294 MENYSRRRHLEEGYSFVYTPHVTKGQLFETSGHLEWYKDGMFPPMRVDEECDDQGNVTKE 353

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
              + LKPMNCP H  ++    +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDD
Sbjct: 354 GFDYYLKPMNCPMHNLIYKSRSRSYRELPLRLFEFGTVYRYEKSGVVHGLTRGRGFTQDD 413

Query: 391 AHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMK 449
           +H++CT+EQM +E  K+   ++ + KD+G +   ++LST+     VGSD +W++A N + 
Sbjct: 414 SHIYCTREQMKDELTKLLTFVLDLLKDYGLDDFYLELSTKNPHKFVGSDEIWEEATNTLA 473

Query: 450 GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAF 509
            V           +         AFYGPK     +DAIGR WQ  TIQ+DFNLP RF+  
Sbjct: 474 EVATASG------LELVPDPEGAAFYGPKISVQARDAIGRTWQMSTIQLDFNLPERFDLE 527

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQ 569
           Y  +   +  PVMIHRA+FGSIERF G++ E++ G  P WL+P+Q  +  +  +  +Y  
Sbjct: 528 YTAADGSRQRPVMIHRALFGSIERFFGVLTEHYAGAFPAWLAPVQVRLVPVAETFNDYCD 587

Query: 570 EIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           +IAN L++ ++ +E D  ++    KIR  +  KIP  +I G ++A   ++  R  G    
Sbjct: 588 DIANRLRAENVRVEVDTTDDRFGKKIRNAAKDKIPFTLIAGGEDAEANAVSFRYRGGEQK 647

Query: 630 QKVSLLDAIPILTK 643
             V +  AI  + +
Sbjct: 648 NGVPIDQAIAEILE 661


>gi|238882425|gb|EEQ46063.1| threonyl-tRNA synthetase [Candida albicans WO-1]
          Length = 706

 Score =  568 bits (1463), Expect = e-159,   Method: Composition-based stats.
 Identities = 236/650 (36%), Positives = 358/650 (55%), Gaps = 25/650 (3%)

Query: 4   DIKLTFPDGSIKN-FPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
            IK+T  DG+IK       +  D+A SI +S A++ V   ++GK+ D+  P+  +  +E 
Sbjct: 58  PIKITLRDGTIKEGTAYETSPMDIANSIGKSFAERQVIAKVDGKLWDMPRPLEGDVKLEF 117

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF---DKEQPFSSDE 118
           +  E P   AV  HS AHI+ EA +  +    ++ GP  EDGF+YD    + E   +  +
Sbjct: 118 LDFEHPEGKAVFWHSSAHILGEACECHY-GCHLSHGPPTEDGFFYDMSINNGETFVTQAD 176

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
              +E+   + I     F +  ++ E+  ++F   K   K  I + IP   + T+YR G 
Sbjct: 177 FGNLEQVATKAIKEKQKFERLEMTKEQLLKMFHYNKYKVKF-ISDKIPDGTSTTVYRCGP 235

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLC GPH+  +G++K F K++K + +Y+ GD+    L R+YG ++  ++ +T++L FL
Sbjct: 236 LIDLCVGPHIPHSGRIKAF-KVLKNSSSYFLGDATNDSLQRVYGISFPDKKLMTEHLKFL 294

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
            E+ +RDHRK+ RE +LF   E   G   W   G +I+ TL+  +R + +   YEE+ TP
Sbjct: 295 AEAAERDHRKIGREQELFIFNEMSPGSAMWLPHGARIYNTLVDTLRTEYRKRGYEEVITP 354

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW+ SGHW +Y+ NMF+ +       +  TF LKPMNCPGH  +F    +SYRE
Sbjct: 355 NMYSTKLWETSGHWQNYKENMFSFEV------EKETFGLKPMNCPGHCILFKSRERSYRE 408

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP R+A+FG ++RNE SG+L GL RVR F QDDAH+FCT +Q+  E   + + +  +Y  
Sbjct: 409 LPWRVADFGVIHRNEFSGALSGLTRVRRFQQDDAHIFCTTDQIGTEIAGVFDFLKKMYGI 468

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFE  M +LSTRPEK VG    W+ AE  ++  L+      +  +N     G+GAFYGP
Sbjct: 469 FGFEFKM-ELSTRPEKYVGDLDTWNSAEKKLEQALNDFLGEGKWELN----PGDGAFYGP 523

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K + ++ DA+ R +QC TIQ+DF LP RF   Y +       PVMIHRA+ GS+ER   I
Sbjct: 524 KIDIMISDALKRWFQCATIQLDFQLPQRFELEYKSDKGPNTRPVMIHRAILGSVERMTAI 583

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH-LSIETDFRNETINYKIR 596
           + E++KG  P WLSP Q ++  +     +YAQ++   L   +    + D    T+  KIR
Sbjct: 584 LTEHYKGKWPFWLSPRQILIVPVGPKYYDYAQKLQKKLNDDYFFYCDVDVSGNTLPKKIR 643

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK----VSLLDAIPILT 642
              + K   I I G++E +  S+ +R       Q     V   D +  L 
Sbjct: 644 TGQMYKYNFIFIVGEEEENSESVNVRNRDIPEEQGKNAMVGFDDVVKQLV 693


>gi|257456688|ref|ZP_05621878.1| threonyl-tRNA synthetase [Treponema vincentii ATCC 35580]
 gi|257445881|gb|EEV20934.1| threonyl-tRNA synthetase [Treponema vincentii ATCC 35580]
          Length = 586

 Score =  568 bits (1463), Expect = e-159,   Method: Composition-based stats.
 Identities = 286/582 (49%), Positives = 394/582 (67%), Gaps = 21/582 (3%)

Query: 67  PRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKM 126
              L +IRHS AHIMAEAV +++P  +VAIGP IE GFYYDFD   P + ++LA+IEK+M
Sbjct: 8   SEKLPLIRHSIAHIMAEAVMNLFPGTKVAIGPAIEHGFYYDFDLPTPITQNDLARIEKEM 67

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGP 186
           + +++    F+K+ ++ ++A +LF+   + +K E++  +P    +++YR G + DLC+GP
Sbjct: 68  RRLLSTPQNFVKEVVTRQQALDLFK--DQPFKCELINDLPPDAEISIYRSGNFVDLCKGP 125

Query: 187 HVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           HV ++ ++  + FKL K+AGAYWRGD  RPML+RIYGTAW T  +L  YL    E+EK D
Sbjct: 126 HVANSKEINAQSFKLEKIAGAYWRGDEKRPMLTRIYGTAWETPNDLKTYLTMQAEAEKHD 185

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHL 304
           HRK+ RE+DLFHI ED  G +FWH  GW ++ T+  ++R+KIK+  Y E+NTP V+ Q L
Sbjct: 186 HRKIGRELDLFHIEEDNPGEVFWHPNGWTLYLTVQQHVRQKIKEDGYVEVNTPFVMPQSL 245

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W +SGHW+ Y+ NMF       T  + R FALKPMNCPGHV +F  G+KSYR+LP+R+AE
Sbjct: 246 WLRSGHWEKYKENMFI------TESEKRMFALKPMNCPGHVEIFKQGIKSYRDLPLRIAE 299

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK-- 422
           FGS  RNEPSGSLHG+MRVRGF QDDAH+FCT+EQ+ +E  K  NL+ S+Y+DFGF+   
Sbjct: 300 FGSCTRNEPSGSLHGIMRVRGFVQDDAHIFCTEEQISSEVCKFCNLLKSLYRDFGFDDKA 359

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+VK STRPEKRVG DA WD AEN +              +   +  GEGAFYGPK E+ 
Sbjct: 360 ILVKFSTRPEKRVGDDATWDRAENALAEACKAAG------LEYEIAPGEGAFYGPKLEFT 413

Query: 483 LKDAIGRDWQCGTIQVDFNLPS--RFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           L DA+GR+WQCGTIQ D+ LPS  R NA Y+   ++K  PVM+HRA  GS+ERFIGI+IE
Sbjct: 414 LVDALGREWQCGTIQADYQLPSKDRLNAEYIGEDNQKHQPVMLHRAALGSLERFIGILIE 473

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
            F G LP WLSP+QA+V  +     EYA++IA++L      ++ D   + +N KIR++  
Sbjct: 474 QFGGALPPWLSPVQAMVIPVAPVFNEYAEQIASVLTKAGFRVKADIDTDRMNAKIRKYQE 533

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +KIP  ++ G+KE    S+ +R       + +S+ +    L 
Sbjct: 534 QKIPYQLVVGEKEKQSNSVTVRLLKG-EQKTMSVDEFAAFLK 574


>gi|86607055|ref|YP_475818.1| threonyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
 gi|86555597|gb|ABD00555.1| threonyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
          Length = 603

 Score =  568 bits (1463), Expect = e-159,   Method: Composition-based stats.
 Identities = 234/592 (39%), Positives = 364/592 (61%), Gaps = 14/592 (2%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           ++++   +   L  IRH+ +H++A AVQ ++P+ QV IGP  + GFYYDFD  +PF+ ++
Sbjct: 15  LKLLRTHESPKLERIRHTTSHVLAMAVQRLFPKAQVTIGPTTDYGFYYDFDHPEPFTPED 74

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L +I+K+MQ II +  P +++ +S E+AR   E+  E YK+EIL+SIP  E +T+Y  G+
Sbjct: 75  LERIKKEMQAIIKKGLPVIREEVSREEARRRIEALGEPYKLEILDSIPEGEPITIYHLGD 134

Query: 179 -WFDLCRGPHVRSTGQVKK-FFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
            W+DLC GPHV +T ++    F L+ VAGAYWRGD  +P L RIYGTAW T +EL +Y  
Sbjct: 135 EWWDLCAGPHVENTKEINPKAFDLLSVAGAYWRGDETKPQLQRIYGTAWETPEELKEYKR 194

Query: 237 FLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEI 294
            LEE+++RDHRKL +E+ LF  A++ G G+  W  KG  +   L  ++ + ++K  Y  +
Sbjct: 195 RLEEAKRRDHRKLGKELGLFIFADEVGPGLPLWTPKGTTLRWVLEDFLKQEQLKRGYLPV 254

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL-RTFALKPMNCPGHVAVFNHGLK 353
            TP +    L++ SGHW  YR +MF +    +  +   + F +KPMNCP H+ ++   L+
Sbjct: 255 VTPHIARVDLFKISGHWQKYREDMFPMMAESEEARAAEQGFVMKPMNCPFHIQIYKSELR 314

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYR+LP+R AEFG+VYR E SG L GL RVRGFT DDAH+F   +Q+  E LK+ +LI+ 
Sbjct: 315 SYRDLPLRYAEFGTVYRYEQSGELGGLTRVRGFTVDDAHLFVRPDQLEEEFLKVVDLILV 374

Query: 414 IYKDFGFEKIMVKLSTRPEK---RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
           ++     +    +LS R  K    +GS   WD AEN ++  ++ +     + I      G
Sbjct: 375 VFDKLKLKDFRARLSFRDPKSDKYLGSPEEWDMAENAIRRAVEKLSMPHFEGI------G 428

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           E AFYGPK ++I +DA+ R+WQ GT+QVD+  P RF+ +YV     +  PVMIHRA FGS
Sbjct: 429 EAAFYGPKLDFIFRDALDREWQLGTVQVDYQNPQRFDLYYVAEDGSRQRPVMIHRAPFGS 488

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
           +ER IGI+IE + G+ P WL+P Q  +  ++   + YA ++ + L+   + +  D  ++ 
Sbjct: 489 LERLIGILIEEYAGDFPFWLAPEQVRILPVSDQYLGYATQVRDQLREQGIRVHIDADSDR 548

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +  KIR     K+P ++I G+KE +  ++ +R+        +++ D +  + 
Sbjct: 549 LPKKIRNAEKAKVPFMLIVGEKEQATGTVSVRQRHGKDLGSLTVADFLDQVQ 600


>gi|297565426|ref|YP_003684398.1| threonyl-tRNA synthetase [Meiothermus silvanus DSM 9946]
 gi|296849875|gb|ADH62890.1| threonyl-tRNA synthetase [Meiothermus silvanus DSM 9946]
          Length = 652

 Score =  568 bits (1463), Expect = e-159,   Method: Composition-based stats.
 Identities = 256/658 (38%), Positives = 390/658 (59%), Gaps = 31/658 (4%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           + +  PDG   N P  AT ++ A++I   LAK A+   ++G++ DL  P+ +G+ ++I+T
Sbjct: 1   MNVYLPDGRELNLPDGATAAEAAKAIGPGLAKAAIGAIVDGELYDLMKPLPQGAKLKILT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIW-------PEVQVAIGPIIEDGFYYDFDKEQPFSS 116
            +DP    + RH+ AH++A+AV+  +         V++AIGP+IE+GFYYD D  +P   
Sbjct: 61  EKDPEFAQLFRHTLAHVLAQAVREFFAAKGFDPDAVKLAIGPVIENGFYYDIDPPEPLGE 120

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
            +L +IE +M +I+  +    +  L  E+A   FE  K+ YK E+++ +P    ++ Y Q
Sbjct: 121 GDLPEIEARMHQIVKENLELRRFVLPREEALRRFEG-KDPYKTELIQDLPEGVEISFYAQ 179

Query: 177 GE----WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELT 232
           GE    + DLCRGPHV STG++  +FKL  +AGAYWRGDS RP L RIYG A+ +++EL 
Sbjct: 180 GEGTHGFTDLCRGPHVPSTGRIPPYFKLTHIAGAYWRGDSRRPQLQRIYGIAFRSKEELD 239

Query: 233 QYLYFLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRRKIKD-D 290
            YL+  EE++KRDHRKL  E++LF I+E+   G+  W  KG  I + L  YM  K ++  
Sbjct: 240 DYLWRQEEAKKRDHRKLGAELELFTISEEVGKGLPLWLPKGAFIRKQLEQYMYEKEQEYG 299

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH 350
           Y+ + TP +    L+  SGH   Y+ +M+A         +   + LKPMNCP H  ++  
Sbjct: 300 YDYVITPHIASSKLYYTSGHLPYYKDDMYAPIEI-----EGEEYYLKPMNCPHHHMIYKA 354

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
            L+SYR+LP+RLAEFG+VYR E SG+L GL RVRGFTQ+DAH++C+K Q+ +E +K+  L
Sbjct: 355 RLRSYRDLPLRLAEFGTVYRFELSGTLSGLARVRGFTQNDAHIYCSKSQVTDEFIKVIQL 414

Query: 411 IISIYKDFGFEKIMVKLS----TRPEKRVGSD-ALWDDAENIMKGVLDTIKNSSQDRINT 465
              +YKDFG      +LS        ++ G     WD+A   ++  L+       + I  
Sbjct: 415 FDEVYKDFGISDYWFRLSLPDFENNPEKFGQPGPHWDEAIAAIRAALEQTGAQFVEGI-- 472

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
               GE  FYGPK +  ++  +G++    T Q+DF    RF   + N   EK  PV+IHR
Sbjct: 473 ----GEATFYGPKLDVQIRSVLGKEESIATNQLDFISGQRFGLEFTNEKGEKEVPVIIHR 528

Query: 526 AVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD 585
           A+ GS +RF    +E+  GN PLWLSPIQA++  I    +EYA++IA  +K+  L +E D
Sbjct: 529 AIMGSFDRFFAFYLEHTAGNFPLWLSPIQAVIVPIADRHLEYARQIAQAMKAAKLRVEVD 588

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            R E +N KIR+  ++KIP+I++ GDKE  E +I +R   +   + + L + I  + +
Sbjct: 589 DRPERMNAKIRDAELQKIPLILVVGDKEQEEGTINLRERQAKAQRTLKLEELIGEMQE 646


>gi|184201017|ref|YP_001855224.1| threonyl-tRNA synthetase [Kocuria rhizophila DC2201]
 gi|183581247|dbj|BAG29718.1| threonyl-tRNA synthetase [Kocuria rhizophila DC2201]
          Length = 718

 Score =  567 bits (1462), Expect = e-159,   Method: Composition-based stats.
 Identities = 251/670 (37%), Positives = 369/670 (55%), Gaps = 50/670 (7%)

Query: 11  DGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI-EIITPEDPRS 69
           DG  +      T +++         +  V   +NG + DLS P+ +G + E +   +P  
Sbjct: 12  DGESRTAEPGTTAAELYTE-----QRDVVVAHVNGVLKDLSTPLADGDVVERVLVSEPEG 66

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           L V+RHS AH+MA+AVQ + P+ ++ IGP I DGFY+DFD  +PF+ ++L  +EK M +I
Sbjct: 67  LEVLRHSTAHVMAQAVQQLRPDAKLGIGPYITDGFYFDFDVAEPFTPEDLKALEKSMLKI 126

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILE------------------SIPAKENV 171
           + R+  F ++ ++ ++AR   E   E YK+E+++                         +
Sbjct: 127 VNRNQIFRRRTVTEDEARA--EMADEPYKLELIDLAGGPGSGAVDESAEGASVEVGGGEL 184

Query: 172 TLYRQGE-------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTA 224
           T+Y   +       W DLCRGPH+  T  +   + LM+ A AYWRGD     L RIYGTA
Sbjct: 185 TVYDNVDRKSGDVVWRDLCRGPHLPDTKHIGNGYALMRSAAAYWRGDQRNEQLQRIYGTA 244

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM 283
           W ++ EL  Y   L E+E+RDHRKL  E+DLF   ++ GSG+  +H KG  I + +  Y 
Sbjct: 245 WPSKDELKAYKERLAEAERRDHRKLGVELDLFSFPDELGSGLPVFHPKGGIIRKEMEDYS 304

Query: 284 R-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT--------IKDLRTF 334
           R R  +  YE + TP +   HL++ SGH D YR  MF     D+          K  + +
Sbjct: 305 RERHARAGYEFVYTPHITKGHLYEVSGHLDWYRDGMFPPMHVDEERDPDTGELTKPGQDY 364

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
            LKPMNCP H  ++    +SYRELP+RL EFG+VYR E SG +HGL RVRG TQDDAH++
Sbjct: 365 YLKPMNCPMHNLIYRSRGRSYRELPLRLFEFGAVYRYEKSGVIHGLTRVRGMTQDDAHIY 424

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLD 453
           CT+EQM  E     N ++S+ KD+G E   ++LST+     VGSD +WD+A   ++ V +
Sbjct: 425 CTREQMKGELTNTLNFVLSLLKDYGMEDFYLELSTKDPNKFVGSDEIWDEATRTLREVAE 484

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS 513
                    +         AFYGPK     +DAIGR WQ  TIQ+DFNLP RF+  Y  S
Sbjct: 485 DSG------LELVPDPAGAAFYGPKISVQARDAIGRTWQMSTIQLDFNLPERFDLEYQAS 538

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIAN 573
              +  PVMIHRA+FGS+ERF+G++ E++ G  P WLSP+Q     +  +  +Y  E A 
Sbjct: 539 DGSRRRPVMIHRALFGSVERFMGVLTEHYAGAFPAWLSPVQVRAIPVAEAFNDYLDEFAQ 598

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            L+   + +E D  ++    KIR  S  KIP ++I G ++A   ++  R    +    VS
Sbjct: 599 TLRERGIRVEVDTSSDRFPKKIRTASKDKIPFVVIAGGEDAEAGTVSFRFRDGSQHNGVS 658

Query: 634 LLDAIPILTK 643
             +A+ ++ +
Sbjct: 659 QAEAVELIAR 668


>gi|313899489|ref|ZP_07832999.1| threonine--tRNA ligase [Clostridium sp. HGF2]
 gi|312955777|gb|EFR37435.1| threonine--tRNA ligase [Clostridium sp. HGF2]
          Length = 579

 Score =  567 bits (1462), Expect = e-159,   Method: Composition-based stats.
 Identities = 236/586 (40%), Positives = 368/586 (62%), Gaps = 19/586 (3%)

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDEL 119
           +I  ++   L+ + HSCAH+MA+AV+ ++P+ +  +GP+I +GFYYD D  ++    ++L
Sbjct: 3   MIDIKEHEELSRLNHSCAHMMAQAVKRLYPQAKFWVGPVISEGFYYDIDLGDEVIKEEDL 62

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A+IEK+M++I       +++ +S E+A E+   + + YK++++  +     +T Y+QGE+
Sbjct: 63  AKIEKEMKKIAKDGKRIVRKEISKEEALEM--FQNDPYKIDLISDL-EDGTITCYQQGEF 119

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV +  Q+K F KL+K +GAYW+GD++  ML RIYG  + T +EL  +L+ LE
Sbjct: 120 IDLCRGPHVDTVKQLKNF-KLLKHSGAYWKGDASNKMLQRIYGICFPTAEELEDHLHLLE 178

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E++KRDH+KL RE+ LF ++E   G+ F+   G  I   L ++   +  K++Y+ I TP 
Sbjct: 179 EAKKRDHKKLGRELGLFMMSEFAPGMPFFLPNGMIIRNLLENFWYEEHTKENYQFIKTPI 238

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++ + LW+ SGHW++Y+ NM+          D R FA+KPMNCPG + VF +GL SY++L
Sbjct: 239 MMSKELWEVSGHWENYKENMYTTMV------DDREFAIKPMNCPGSLLVFKNGLHSYKDL 292

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+ E G V+R+E SG+L+GL RVR FTQDDAH+F   +Q+ +E +++   I  +Y  F
Sbjct: 293 PLRMGELGQVHRHEASGALNGLFRVRTFTQDDAHIFMRPDQIESEVMQLIQFIDRVYSVF 352

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           G    +   +   +K +G  A+W+ +E  +               +  V  G+GAFYGPK
Sbjct: 353 GLSYRIELSTRPEKKYIGDLAIWEQSEKALADACVHAGK------DYKVNPGDGAFYGPK 406

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++ +KD++GR+WQCGTIQ+D NLP RF+  YV     K  PVM+HR +FGSIERFIGI+
Sbjct: 407 LDFHIKDSLGREWQCGTIQLDMNLPERFDLTYVEKDGSKVRPVMLHRVIFGSIERFIGIL 466

Query: 539 IENFKGNLPLWLSPIQAIVTTI-TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           IE+F G+ P+WL+P Q  V  +     + YA E+   L +     + D RNE + Y+IRE
Sbjct: 467 IEHFAGHFPVWLAPQQVSVVPVHHEKHLGYANEVHEKLCALGFRSKLDARNEKLGYRIRE 526

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             + KIP  ++ GD E   RS+ +RR  S  +  +SL D I ++ K
Sbjct: 527 AQLSKIPYQLVIGDGEIENRSVTLRRAQSRESITMSLDDFIAMMEK 572


>gi|72162507|ref|YP_290164.1| threonyl-tRNA synthetase [Thermobifida fusca YX]
 gi|123747139|sp|Q47N28|SYT_THEFY RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|71916239|gb|AAZ56141.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Thermobifida
           fusca YX]
          Length = 659

 Score =  567 bits (1462), Expect = e-159,   Method: Composition-based stats.
 Identities = 253/668 (37%), Positives = 377/668 (56%), Gaps = 46/668 (6%)

Query: 1   MPS--DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS 58
           M +  ++++T   G+ +      T     E+      +  +A  +NG+  DL+  + +G 
Sbjct: 1   MSAVPELRITLA-GTERVVAAGTTAGQALEA----DGRTVIAALVNGEPRDLTHELADGD 55

Query: 59  I-EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSD 117
           + E I  +     A++RHSCAH++A+AVQ ++PE ++ IGP IE+GFYYDFD  +PF+ D
Sbjct: 56  VVEEIRIDSEEGRAILRHSCAHVLAQAVQELFPEAKLGIGPPIENGFYYDFDVAEPFTPD 115

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE-------------S 164
           +L +IEK+MQEII +   F ++ ++ E AR   E   E YK+E++E              
Sbjct: 116 DLKRIEKRMQEIIKQGQRFSRRAVTDEDARA--ELADEPYKLELIELKGGAAEAAEGAGV 173

Query: 165 IPAKENVTLY-----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPML 217
                 +T+Y     R GE  W DLCRGPH+  T  +  F KLM+ A AYWRG    P L
Sbjct: 174 EVGAGQLTIYDNLHPRTGEVCWKDLCRGPHLPDTRAIPAF-KLMRTAAAYWRGSEKNPQL 232

Query: 218 SRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIF 276
            RIYGTAW T+  L  YL  LEE+ KRDHRKL  E+DLF   ++ GSG+  +H KG  + 
Sbjct: 233 QRIYGTAWETKDALKSYLTMLEEAAKRDHRKLGVELDLFSFPDELGSGLAVFHPKGGVVR 292

Query: 277 QTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFA 335
           + +  Y RR+ ++  Y+ +NTP +    L++ SGH  +Y   MF          +   + 
Sbjct: 293 KVMEEYSRRRHEEAGYQFVNTPHISKAGLFETSGHLPNYADAMFPPIQF-----EGADYY 347

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC 395
           LK MNCP H  ++    +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDDAH++C
Sbjct: 348 LKAMNCPMHNLIYRSRGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYC 407

Query: 396 TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP--EKRVGSDALWDDAENIMKGVLD 453
           TKEQM +E  ++   ++ + +D+G     ++LSTR    K +G    W++A  I++    
Sbjct: 408 TKEQMPDELDRLLTFVLDLLRDYGLSDFYLELSTRDDSPKFIGEPQEWEEATEILRQAAQ 467

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS 513
                 +  +   +  G  A+YGPK     KDAIGR WQ  TIQVDF  P RF   Y  +
Sbjct: 468 ------KQNLELVMDAGGAAYYGPKISVQAKDAIGRTWQMSTIQVDFQQPKRFELEYQAA 521

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIAN 573
              +  PVMIHRA+FGSIERF  +++E++ G  P WL+P+Q +   I S  V Y +++A 
Sbjct: 522 DGSRQRPVMIHRALFGSIERFFAVLLEHYAGAFPAWLAPVQVVGIPIASEHVPYLEDVAR 581

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            L+ H + +E D  ++ +  KIR    +KIP +++ GD + S+ ++  R    +    V 
Sbjct: 582 RLREHGVRVEVDASDDRMQKKIRNAQKQKIPFMLLAGDNDVSKGAVSFRYRDGSQNNGVP 641

Query: 634 LLDAIPIL 641
           +  AI  +
Sbjct: 642 IDKAIEEI 649


>gi|291450340|ref|ZP_06589730.1| threonyl-tRNA synthetase [Streptomyces albus J1074]
 gi|291353289|gb|EFE80191.1| threonyl-tRNA synthetase [Streptomyces albus J1074]
          Length = 660

 Score =  567 bits (1462), Expect = e-159,   Method: Composition-based stats.
 Identities = 252/667 (37%), Positives = 376/667 (56%), Gaps = 42/667 (6%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           SD+++     S +   V  TG+  A+  +    +  +A  ++G++ DL+    +G S+E 
Sbjct: 2   SDVRVIIQRDSEREERVVTTGTTAADLFAGE--RTVIAARVDGELKDLAYVPGDGESVEP 59

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +       L ++RHS AH+MA+AVQ ++PE ++ IGP ++ GFYYDFD  +PF+ ++L +
Sbjct: 60  VDISSGDGLDILRHSTAHVMAQAVQELFPEAKLGIGPPVKGGFYYDFDVAEPFTPEDLKR 119

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-------------ESIPAK 168
           +EKKMQEI  R   F ++  + E AR   E   E YK+E++             ++    
Sbjct: 120 VEKKMQEIQKRGQRFSRRVTTDEDARA--ELAGEPYKLELIGLKGNAAQAADGADAEVGG 177

Query: 169 ENVTLYRQGE-------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIY 221
             +T+Y   +       W DLCRGPH+ +T  +  F KLM+ A AYWRG    P L RIY
Sbjct: 178 GELTIYDNLDAKTGELCWKDLCRGPHLPTTRNIPAF-KLMRSAAAYWRGSEKNPQLQRIY 236

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLI 280
           GTAW +++EL  +L FL E+EKRDHRKL  E+DLF   ++ G G+  +H KG  + + + 
Sbjct: 237 GTAWPSKEELKAHLEFLAEAEKRDHRKLGTELDLFSFPDELGPGLAVFHPKGGVVRKEME 296

Query: 281 SYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPM 339
           +Y RR      YE +NTP +  +HL++ SGH  +Y   MF          D + + LK M
Sbjct: 297 NYSRRRHEDAGYEFVNTPHISKEHLFETSGHLPNYSEGMFPPIEF-----DGQNYRLKAM 351

Query: 340 NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQ 399
           NCP H  +F    +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDD+H++CTKEQ
Sbjct: 352 NCPMHNLIFKGRGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRSRGFTQDDSHIYCTKEQ 411

Query: 400 MFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK---RVGSDALWDDAENIMKGVLDTIK 456
           M  E   +   ++ + +D+G  +  ++LSTR  +    +G DA W++A   ++   +   
Sbjct: 412 MPEELDSLLTFVLDLLRDYGLNQFELELSTRDPESDKFIGEDAEWEEATEALRQAAE--- 468

Query: 457 NSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE 516
              +  +      G  A+YGPK     KDAIGR WQ  TIQVDF  P RF   Y  +   
Sbjct: 469 ---KQGLPLVPDPGGAAYYGPKISVQAKDAIGRSWQMSTIQVDFQQPKRFGLEYTAADGS 525

Query: 517 KCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLK 576
           +  PVMIHRA+FGSIERF  +++E++ G  P WL+P+QA+   I  + V Y QE A   K
Sbjct: 526 RQQPVMIHRALFGSIERFFAVLLEHYAGAFPAWLAPVQAVGIPIGDAHVSYLQEFAADAK 585

Query: 577 SHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
           +  L +E D  ++ +  KIR H   K+P +II GD++ +  ++  R    +    +   D
Sbjct: 586 ARGLRVEVDSSSDRMQKKIRNHQKAKVPFMIIVGDEDMNAGTVSFRYRDGSQENGIPRED 645

Query: 637 AIPILTK 643
           A+  L  
Sbjct: 646 ALAKLQD 652


>gi|325336816|gb|ADZ13090.1| Threonyl-tRNA synthetase [Riemerella anatipestifer RA-GD]
          Length = 591

 Score =  567 bits (1462), Expect = e-159,   Method: Composition-based stats.
 Identities = 245/599 (40%), Positives = 365/599 (60%), Gaps = 21/599 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            +K+T PDGSI+ F    T  +VA+SIS  LA+  ++  +N K  +++ P+  + +++++
Sbjct: 1   MVKITLPDGSIREFEGVVTPLEVAKSISEGLARNTISAMVNNKQVEVTTPITEDATVQLL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
           T  D        HS AH++A+A+ + +P  ++ IGP IE+GFYYD D  ++  S  +  +
Sbjct: 61  TWNDDMGKKAFWHSSAHLLAQAILAYYPNAKLTIGPAIENGFYYDVDFGDETLSEKDFEK 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE+KM E   +DS F    +S  +A +  E     YK E++E++   E +T     ++ D
Sbjct: 121 IEQKMLENAKKDSTFKLYAISKAEALK--EYADNPYKTELIENLNDGE-ITFCSHDDFTD 177

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG H+ STG VK   K++  AGAYWRGD   P L+R+YG ++  Q++L +YL  LEE+
Sbjct: 178 LCRGGHIPSTGIVK-AVKILNAAGAYWRGDEKNPQLTRVYGISFPKQKDLKEYLERLEEA 236

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           ++RDHRKL +E+ LF  +E    G+  W  KG  + + L S++   + K  YE + TP +
Sbjct: 237 KRRDHRKLGKELGLFTFSEKVGAGLPLWLPKGAALRKKLESFLSEAQRKGGYEFVMTPHI 296

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +  L++ SGH++ Y A+ F       T      F LKPMNCP H  V+     SY++LP
Sbjct: 297 GNIELYKTSGHYEKYGADSFQ---PIKTPHVGEEFLLKPMNCPHHCEVYKAQQWSYKDLP 353

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
            R AEFG+VYR E SG LHGL RVRGFTQDDAH+FCT +Q+  E  K+ +L++ ++K  G
Sbjct: 354 KRYAEFGTVYRYEQSGELHGLTRVRGFTQDDAHLFCTPDQLLEEFEKVIDLVLYVFKSLG 413

Query: 420 FEKIMV----KLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           FE  +     +      K +GS+  W+ AE+ +      I  +    +NT V  GE AFY
Sbjct: 414 FEDFIAQVSLRDKENRAKYIGSEENWEKAESAI------ITAAKNKGLNTVVEYGEAAFY 467

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDA+GR WQ GTIQVD+NLP RF+  YV S +E+  P+MIHRA FGS+ERFI
Sbjct: 468 GPKLDFMVKDALGRSWQLGTIQVDYNLPERFDLTYVGSDNERHRPIMIHRAPFGSMERFI 527

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
            I+IEN  G+ PLWL+P Q I+  I+    +YA++++ LL++H +    D RNE    K
Sbjct: 528 AILIENTAGDFPLWLNPDQYILLPISEKYTDYAKKVSQLLENHDICGLVDERNEKTGKK 586


>gi|159899369|ref|YP_001545616.1| threonyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
 gi|159892408|gb|ABX05488.1| threonyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
          Length = 604

 Score =  567 bits (1462), Expect = e-159,   Method: Composition-based stats.
 Identities = 241/601 (40%), Positives = 359/601 (59%), Gaps = 30/601 (4%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L  +RHS AH++A+AV  I+PE ++AIGP +E+GFYYDFD  +P + D+L  IE K
Sbjct: 7   DNDPLYRLRHSTAHVLAQAVLEIFPEGKIAIGPPVENGFYYDFDLPRPLTPDDLKDIEAK 66

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN------------VTL 173
           M++II     F  + +S ++ARELF+   + YK+E++  +   E+            ++ 
Sbjct: 67  MRKIIKAKHRFAYREVSADEARELFK--NQPYKLELIAGLAKGEDEYGEKAAASDTIIST 124

Query: 174 YRQGEWFDLCRGPHVRSTGQ-VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELT 232
           Y+   + DLC+GPHV S G      FKL++V+GAYWRGD  RPML RIYGT W +++EL 
Sbjct: 125 YKHDSFEDLCKGPHVESLGDIPPNGFKLLRVSGAYWRGDEKRPMLQRIYGTVWPSKEELD 184

Query: 233 QYLYFLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDD 290
            YL+  EE++KRDHRKL RE+ LF  ++    G+  W  KG  +   L  ++R+ +I+  
Sbjct: 185 HYLWQQEEAKKRDHRKLGRELGLFTFSQKVGAGLALWLPKGAILRDVLERFLRQAQIERG 244

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVK----CADDTIKDLRTFALKPMNCPGHVA 346
           Y  + TP +    L++ SGHW +YR  +F         D    +   + LKPMNCP H+ 
Sbjct: 245 YLPVVTPHMGKIDLYKTSGHWYTYRDGIFPPMREIENDDTENPEGEIYLLKPMNCPHHIE 304

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           ++    +SYR+LP+RLAEFG+VYR E SG L GL+RVR FT DD+H+F T +Q+  E LK
Sbjct: 305 IYASEPRSYRDLPLRLAEFGTVYRYEHSGELTGLLRVRSFTVDDSHLFVTPDQLEAEFLK 364

Query: 407 IHNLIISIYKDFGFEKIMVKLSTR---PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
           + +LI+ ++   G +    ++  R     K +GSD +W+ A+N +    +      +  +
Sbjct: 365 VVDLILFVFGTMGLKDFQARVGLREVGNPKYIGSDEVWEKAQNAIINAAE------KKGL 418

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
           N  V+ GE AFYGPK ++I +D +GR WQ GT+QVD+NLP RF   Y     +K  P+MI
Sbjct: 419 NYIVVEGEAAFYGPKLDFIFRDVLGRQWQLGTVQVDYNLPERFEIEYTGEDGQKHRPIMI 478

Query: 524 HRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIE 583
           HRA FGSIERF+G +IE + G  P+WL+P+Q  +  IT   V YA+ +A  L +  L +E
Sbjct: 479 HRAPFGSIERFVGTLIEQYAGAFPVWLAPVQVTLVPITDRHVAYAESVAAKLNAQGLRVE 538

Query: 584 TDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            D  N  +N KIR+    KIP +++ GDKE    ++ +R+        +S+ + I  +  
Sbjct: 539 VDASNNRMNAKIRDAQKLKIPYMLVVGDKEEEAGAVAVRQRSGGDLGSISVDEFIARIKD 598

Query: 644 E 644
           E
Sbjct: 599 E 599


>gi|284991611|ref|YP_003410165.1| threonyl-tRNA synthetase [Geodermatophilus obscurus DSM 43160]
 gi|284064856|gb|ADB75794.1| threonyl-tRNA synthetase [Geodermatophilus obscurus DSM 43160]
          Length = 690

 Score =  567 bits (1462), Expect = e-159,   Method: Composition-based stats.
 Identities = 236/666 (35%), Positives = 363/666 (54%), Gaps = 45/666 (6%)

Query: 13  SIKNFPVHATGSDVAESISRSLA--KKAVAVA--INGKVCDLSD-PVREGSIEIITPEDP 67
           SI+  P   T  D  ++    L     AV V     G + DL+  P  +  +E +    P
Sbjct: 12  SIR-VPAGTTAQDALKAAGTPLKGPDGAVVVRDLATGDLKDLAWAPEADAEVEPVPAASP 70

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQ 127
              AVIRHS AH++A+AVQ ++P  ++ IGP +E+GFYYDF  E+PF+ ++L  +EK+MQ
Sbjct: 71  EGRAVIRHSTAHVLAQAVQDLFPGTRLGIGPPVENGFYYDFAPERPFTPEDLEALEKRMQ 130

Query: 128 EIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-------------ESIPAKENVTLY 174
           EI+     F ++ +S   A+   E   E +K+E++             +       +T+Y
Sbjct: 131 EIVKAGQYFSRREISDADAQA--ELAHEPFKLELIGLKGGAGEAAEGADVEVGGAQLTMY 188

Query: 175 -----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNT 227
                R G+  W DLCRGPH+  T  +  F      A AYWRG    P L R+YGTAW +
Sbjct: 189 DNLDPRSGDRVWTDLCRGPHLPRTSNIPAFSLTRS-AAAYWRGSEKNPQLQRVYGTAWES 247

Query: 228 QQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK 286
           ++    +L  + E+E+RDHR+L  E+DLF   ++ GSG+  +H KG  + + +  Y RR+
Sbjct: 248 REAHKAHLEQVAEAERRDHRRLGAELDLFSFPDEIGSGLAVFHPKGGVVRREMEDYSRRR 307

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTI-------KDLRTFALKP 338
            ++  Y  +NTP +    L+Q SGH + Y   M+     D+         +  + + LKP
Sbjct: 308 HEEAGYSFVNTPHITKGQLFQTSGHLEWYAEGMYPAMHLDEERDAEGKVRRQGQDYYLKP 367

Query: 339 MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE 398
           MNCP H  VF    +SY+ELP+RL EFG+VYR E SG +HGL R RGFTQDDAH++CT E
Sbjct: 368 MNCPVHNLVFRSRGRSYKELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYCTPE 427

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR-VGSDALWDDAENIMKGVLDTIKN 457
           QM  E   +   ++ +  D+G E   ++LSTR  ++ +GSD  W+ A + ++   +    
Sbjct: 428 QMQGEIRSLLQFVLDLLADYGLEDFYLELSTRNPEKSIGSDEDWERATDALREAAEASG- 486

Query: 458 SSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK 517
                ++  +  G  AFY PK     +DAIGR WQ  TIQVD  LP RF   Y  +   +
Sbjct: 487 -----LDLVLDPGGAAFYAPKISVQARDAIGRTWQMSTIQVDLMLPERFGLEYTAADGTR 541

Query: 518 CHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKS 577
             PVMIHRA+FGS+ERF G++ E++ G  P WL+P+Q +   +T   V Y +++A  L++
Sbjct: 542 QRPVMIHRALFGSMERFFGVLTEHYAGAFPAWLAPVQVVGIPVTDEQVGYLRDVALQLRA 601

Query: 578 HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
             + +E D  ++ +  KIR  S ++IP ++I G  +A   ++  R    +    V +  A
Sbjct: 602 RGIRVEVDDSDDRMQKKIRTASKQRIPFVLIAGATDAEAGAVSFRFRDGSQHNGVPVEKA 661

Query: 638 IPILTK 643
           +  + +
Sbjct: 662 VAAIAE 667


>gi|257784431|ref|YP_003179648.1| threonyl-tRNA synthetase [Atopobium parvulum DSM 20469]
 gi|257472938|gb|ACV51057.1| threonyl-tRNA synthetase [Atopobium parvulum DSM 20469]
          Length = 588

 Score =  567 bits (1462), Expect = e-159,   Method: Composition-based stats.
 Identities = 242/584 (41%), Positives = 351/584 (60%), Gaps = 18/584 (3%)

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQIE 123
           +    L VIRH  AH++A+A++ ++P  Q A GP  E+GFYYD D  +   + D+   IE
Sbjct: 15  DAAEELEVIRHDAAHLLAQALKRLYPHAQFAYGPATENGFYYDVDLGDTKVNEDDFPAIE 74

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M++I+  +       L  ++A    + + E+YKVE +  +    ++T Y+QGE+ D+C
Sbjct: 75  AEMKKIVKENLKIETFELPRDEAVAYMKERGESYKVEHIGDLAPDAHITFYKQGEYVDMC 134

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+  T  VK F KL  ++GAYW+ D N  ML+RIYG A+ ++ EL QYL  +EE+EK
Sbjct: 135 VGPHMLYTKGVKAF-KLTSISGAYWKADKNNKMLTRIYGVAFGSKDELAQYLKMIEEAEK 193

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRK+ REM+LF +++ G G  FW   G  +   L  Y         Y+E+ TP +L +
Sbjct: 194 RDHRKIGREMELFMMSDFGPGSPFWLPNGMALRNALTEYWHEMQARFGYQEVQTPLILSR 253

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHWD Y+ NM+       T  D   FA+KPMNCPG   ++    +SYR+LP++L
Sbjct: 254 SLWETSGHWDHYKENMYT------TTVDEEDFAIKPMNCPGACLIYKSKPRSYRDLPMKL 307

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AE G  +R E  G+LHGL RVR FTQDDAH+F   +Q+  +     +LI + Y  FGF  
Sbjct: 308 AEAGLDHRYEMKGALHGLFRVREFTQDDAHLFIRPDQITEQVTDASHLITAYYAQFGF-P 366

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +GSD  W+ AE  ++  LD +       I+  V  G+GAFYGPK ++ 
Sbjct: 367 YRVELSTRPEDSMGSDEDWERAEQGLRDALDAMG------IDYVVNEGDGAFYGPKIDFH 420

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D +GR WQCGTIQ+DF LP  F   Y++S   K  P+MIHRA FGS ERFIGI+ EN+
Sbjct: 421 LTDCLGRSWQCGTIQLDFQLPHNFQLEYIDSDGTKKQPIMIHRAGFGSFERFIGILTENY 480

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS-IK 601
           +G  P+WLSP Q  +  ++  +  YA E+A+ L +  + ++ D R+E I YKIRE   + 
Sbjct: 481 EGKFPVWLSPCQVKILPVSEKSRSYAHEVADKLAAAGIRVKVDDRDEKIGYKIREARSLD 540

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           ++P ++I G++E    +I +R   S  T    L + I  + KE+
Sbjct: 541 RVPYMLILGEQEVEAGNISVRDR-SNETHAAELDEFIAQVVKEN 583


>gi|86741833|ref|YP_482233.1| threonyl-tRNA synthetase [Frankia sp. CcI3]
 gi|86568695|gb|ABD12504.1| Ser-tRNA(Thr) hydrolase [Frankia sp. CcI3]
          Length = 701

 Score =  567 bits (1461), Expect = e-159,   Method: Composition-based stats.
 Identities = 247/667 (37%), Positives = 364/667 (54%), Gaps = 46/667 (6%)

Query: 3   SDIKLTFPDGS---IKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI 59
           SD+++T         +  P   T +++         +  +A  ++G+  DL+  + +G +
Sbjct: 43  SDVRVTVQHAQRSDPRVVPTGTTAAELFAD-----DRNVIAALVDGQQRDLAHVLADGVV 97

Query: 60  -EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
            E I  + P   A++RHS AH++A+AVQ ++P+ ++ IGP I+DGFYYDFD E PF+ D+
Sbjct: 98  VEPIMIDSPAGRAIVRHSTAHVVAQAVQELFPKARLGIGPPIDDGFYYDFDVESPFTPDD 157

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKE--------- 169
           L  IEK+ Q II     F ++ ++  +AR   E   E YK+E++    +           
Sbjct: 158 LRAIEKRAQAIIRAGQRFSRRVVTEPEARA--ELADEPYKIELIGLKSSDTAADDAEASV 215

Query: 170 -----NVTLYRQGE-------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPML 217
                 +T+Y   +       W DLCRGPHV +T  +  F  L   A AYWRG    P L
Sbjct: 216 EVGAGELTIYDNLDAKTGELCWKDLCRGPHVPTTRAIPAFAILRS-AAAYWRGSEKNPQL 274

Query: 218 SRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIF 276
            RIYGTAW ++  L  Y   L E+EKRDHRKL  E+DLF    + G G+  +H +G  I 
Sbjct: 275 QRIYGTAWESRDALKAYQTRLAEAEKRDHRKLGAELDLFSFPTEIGPGLAVFHPRGGAIR 334

Query: 277 QTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFA 335
             +  Y RR  I+  Y  +NTP +    L+Q SGH D +   M+     D        + 
Sbjct: 335 TAMEDYSRRRHIEAGYSFVNTPHITKSELYQISGHLDWFAEGMYPPMQLDG----GTDYY 390

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC 395
           LKPMNCP H+ +F    +SYRELP+RL EFG+VYR E SG +HGL RVRG TQDDAH+FC
Sbjct: 391 LKPMNCPMHILIFRSRGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRVRGLTQDDAHLFC 450

Query: 396 TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR-VGSDALWDDAENIMKGVLDT 454
            +EQ+  E   +   ++ + +DFG     ++LSTRP  + VG+D  W  A  +++     
Sbjct: 451 AREQLPTELDSVLTFVLGLLRDFGLTDFYLELSTRPAGKAVGTDEEWAQATELLREAAQ- 509

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH 514
                +  +   +  G GAFYGPK     +DAIGR WQ  TIQVDF LP RF   Y  + 
Sbjct: 510 -----KQDLELVMDPGGGAFYGPKISVQARDAIGRTWQLSTIQVDFQLPRRFGLEYQAAD 564

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANL 574
             +  P MIHRA+FG+IERF  I++E++ G LP WL+P+Q +   IT   V Y  E+A  
Sbjct: 565 GTRQRPFMIHRALFGTIERFFAILLEHYAGALPPWLAPVQVVGIPITDEHVPYLDEVARR 624

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           L +H L +E D  ++ +  KIR    +K+P +++ GD + ++ ++  R    T    V +
Sbjct: 625 LAAHGLRVEVDSSDDRMQKKIRTAQKQKVPFMLLAGDSDVAQGAVSFRFRDGTQRNGVPV 684

Query: 635 LDAIPIL 641
            +A+  +
Sbjct: 685 DEAVAEI 691


>gi|115446545|ref|NP_001047052.1| Os02g0538000 [Oryza sativa Japonica Group]
 gi|50251985|dbj|BAD27919.1| putative threonyl-tRNA synthetase [Oryza sativa Japonica Group]
 gi|50252661|dbj|BAD28830.1| putative threonyl-tRNA synthetase [Oryza sativa Japonica Group]
 gi|113536583|dbj|BAF08966.1| Os02g0538000 [Oryza sativa Japonica Group]
 gi|215765092|dbj|BAG86789.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222623006|gb|EEE57138.1| hypothetical protein OsJ_07040 [Oryza sativa Japonica Group]
          Length = 674

 Score =  567 bits (1461), Expect = e-159,   Method: Composition-based stats.
 Identities = 263/592 (44%), Positives = 375/592 (63%), Gaps = 18/592 (3%)

Query: 55  REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPF 114
            E  + + T E    L  IRH+CAH+MA AVQ ++P  +V IGP I++GFYYDFD E P 
Sbjct: 87  EEERVVLPTNESSDRLLRIRHTCAHVMAMAVQKLFPNSKVTIGPWIDNGFYYDFDME-PL 145

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
           +  +L +I+K+M  II ++ P +++ +S E+A++  E+  E YK+EILE I     +T+Y
Sbjct: 146 TDKDLKRIKKEMDRIIRKNLPLVREEVSREEAQKRIEALNEPYKLEILEGIKEDP-ITIY 204

Query: 175 RQGE-WFDLCRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELT 232
             GE W+DLC GPHV STG++ ++  +L  VAGAYWRGD +  ML RIYGTAW T+ +L 
Sbjct: 205 HIGEEWWDLCAGPHVESTGKIDRRAVELESVAGAYWRGDESNQMLQRIYGTAWETEDQLK 264

Query: 233 QYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDD 290
            Y++F EE+++RDHR+L  ++DLF I ED G G++FWH KG  I   L    ++  ++  
Sbjct: 265 AYIHFKEEAKRRDHRRLGLDLDLFSIQEDAGGGLVFWHPKGAIIRHVLEDSWKQIHLQRG 324

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH 350
           Y+ + TP V    LW+ SGH D Y+ NM+     +D +     + L+PMNCP H+ V+  
Sbjct: 325 YDLLYTPHVAKAELWKVSGHIDFYKENMYNQMDVEDEL-----YQLRPMNCPYHILVYKR 379

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
            L SYR+ P+R+AE G+VYR E SGSLHGL RVRGFTQDDAH+FC ++Q+ +E   + +L
Sbjct: 380 KLHSYRDFPIRVAELGTVYRYELSGSLHGLFRVRGFTQDDAHIFCLEDQIKDEIRGVLDL 439

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
              I   FGF    + LSTRPEK VGSD +W+ A   +K  L+             V  G
Sbjct: 440 TEQILGQFGFRYYEINLSTRPEKSVGSDDIWEKATLALKDALED------KGWEYKVDEG 493

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
            GAFYGPK +  ++DA+GR WQC T+QVDFNLP RF+  YVNS+SEK  P+MIHRA+ GS
Sbjct: 494 GGAFYGPKIDLKIEDALGRKWQCSTVQVDFNLPERFDITYVNSNSEKKRPIMIHRAILGS 553

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
           +ERF G++IE++ G+ PLWL+PIQA +  +T + ++Y  E+A+ LKS  +  E     E 
Sbjct: 554 LERFFGVLIEHYAGDFPLWLAPIQARILPVTDNELQYCNEVASELKSKGIRAEV-CHGER 612

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +   IR    KK+P++ + G KE   R++ IR   S     + + +    + 
Sbjct: 613 LPKLIRNAETKKVPLMAVVGPKEVQARTLTIRSRHSGEIGTMPVDEFFRRIQ 664


>gi|320590732|gb|EFX03175.1| threonyl-tRNA synthetase [Grosmannia clavigera kw1407]
          Length = 752

 Score =  567 bits (1461), Expect = e-159,   Method: Composition-based stats.
 Identities = 229/696 (32%), Positives = 365/696 (52%), Gaps = 68/696 (9%)

Query: 4   DIKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           DI +T PDG +I          D+A  IS+SLA + V   ++G + DL  P+  +  + +
Sbjct: 50  DITVTLPDGRTIPGTAWETRPYDIARGISKSLADRTVISRVDGDLWDLMRPLEADAQVSL 109

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF-----------DK 110
           +  ED  +  V  HS AHI+ EA +  +    +  GP  ++GF+YDF           + 
Sbjct: 110 LDFEDDEAKQVYWHSSAHILGEAAEKAF-GCHLCFGPPTDEGFFYDFGMPAEDGQGRPNH 168

Query: 111 EQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN 170
               + D+  ++   M  I+    PF +  ++     E+F+  K    V I   IP   +
Sbjct: 169 HSTVTDDDHKRLSSLMDGIVRERQPFERLVMTKADLLEMFKFNKYKQ-VLINSKIPDGTS 227

Query: 171 VTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQE 230
            T+YR G   DLCRGPHV  T ++K F  ++K + +Y+ GD+    L R+YG ++  ++ 
Sbjct: 228 TTVYRCGPLIDLCRGPHVVDTSRIKAF-AVLKHSASYFLGDAKNDSLQRVYGISFPDKKL 286

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-D 289
           L+ Y+ FLEE+ K+DHR++ ++ +LF   +   G  F+   G +IF  L  ++  +    
Sbjct: 287 LSDYMKFLEEAAKKDHRRIGQDQELFFFHKLSPGSPFFLPHGMRIFNALKEFILSEYHKR 346

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
           DY E+ +P + +  LW+ SGHW+ Y+ +MF ++       + + +ALKPMNCPGH  +F 
Sbjct: 347 DYVEVMSPNMFNADLWRTSGHWEHYQEDMFTLEV------EKQQWALKPMNCPGHCVIFG 400

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
              +SYRELP+R+AEFG ++RNE SG+L GL RVR F QDD+H+FC ++Q+ +E   + +
Sbjct: 401 SRERSYRELPLRMAEFGILHRNEASGALSGLTRVRRFIQDDSHIFCEEDQIGSEIRDLFD 460

Query: 410 LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL 469
            + ++Y   G  K  +KLSTRPEK +G+   WD AE  ++  L+    + +      +  
Sbjct: 461 FLRTVYGKLG-MKFRLKLSTRPEKYLGNLETWDKAEATLQHALEEF--TKESGAEWSLNP 517

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS-----HSEKC------ 518
           G+GAFYGPK +  + DA+ R  QC T+Q+DF LP +FN  Y+ +       +        
Sbjct: 518 GDGAFYGPKIDIQIMDALRRWHQCATLQLDFQLPQQFNLSYMTAASSNSDGKAEAKTVET 577

Query: 519 ------------------------------HPVMIHRAVFGSIERFIGIMIENFKGNLPL 548
                                          PVMIHRAV GS ERFI  + E+F G  P 
Sbjct: 578 KPVEAETKDGKDDSKAVTASAAQTLAPGYSRPVMIHRAVLGSFERFIATLSEHFAGKWPF 637

Query: 549 WLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIII 608
           WLSP Q ++  + + A +Y +E+  +LK+    +++D    T+N KIR   + +   I +
Sbjct: 638 WLSPRQILLVPVMADAEDYVREVQKVLKARGFYVDSDLGANTMNKKIRNGQVLQYNFIFV 697

Query: 609 CGDKEASERSIGIRRFGST-TTQKVSLLDAIPILTK 643
            G KE  +RS+ IR   S      +SL   +  L++
Sbjct: 698 LGSKEMQDRSVSIRVRDSKGDLTTLSLDVVVERLSR 733


>gi|219520186|gb|AAI43944.1| TARSL2 protein [Homo sapiens]
          Length = 766

 Score =  567 bits (1461), Expect = e-159,   Method: Composition-based stats.
 Identities = 232/612 (37%), Positives = 340/612 (55%), Gaps = 23/612 (3%)

Query: 2   PSDIKLTFPDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
            + I +   DG          T   VA  IS+ LA+  V   +NG++ DL  P+  + S+
Sbjct: 159 SNIITVRVADGQTVQGEVWKTTPYQVAAEISQELAESTVIAKVNGELWDLDRPLEGDSSL 218

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDE 118
           E++T ++  + AV  HS AHI+ EA++  +    +  GP IE+GFYYD   E +  SS E
Sbjct: 219 ELLTFDNEEAQAVYWHSSAHILGEAMELYYGGH-LCYGPPIENGFYYDMFIEDRAVSSTE 277

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L+ +E   + II    PF +  +S E   E+F+     +K  IL         T+YR G 
Sbjct: 278 LSALENICKAIIKEKQPFERLEVSKEILLEMFKY--NKFKCRILNEKVNTATTTVYRCGP 335

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLC+GPHVR TG++K   K+ K +  YW G+     L RIYG ++   + +  +  F 
Sbjct: 336 LIDLCKGPHVRHTGKIKTI-KIFKNSSTYWEGNPEMETLQRIYGISFPDNKMMRDWEKFQ 394

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
           EE++ RDHRK+ +E +LF   +   G  F+  +G  I+ TL  ++R +    D+ E+ +P
Sbjct: 395 EEAKNRDHRKIGKEQELFFFHDLSPGSCFFLPRGAFIYNTLTDFIREEYHKRDFTEVLSP 454

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  LW+ SGHW  Y  NMF  +   DT      FALKPMNCPGH  +F H  +S+RE
Sbjct: 455 NMYNSKLWEASGHWQHYSENMFTFEIEKDT------FALKPMNCPGHCLMFAHRPRSWRE 508

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           +P+R A+FG ++RNE SG+L GL RVR F QDDAH+FCT EQ+  E       + S+Y  
Sbjct: 509 MPIRFADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCTVEQIEEEIKGCLQFLQSVYST 568

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF   +  LSTRPE  +G   +W++AE  ++  L       +      +  G+GAFYGP
Sbjct: 569 FGFSFQLN-LSTRPENFLGEIEMWNEAEKQLQNSLMDFGEPWK------MNPGDGAFYGP 621

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIG 536
           K +  +KDAIGR  QC TIQ+DF LP RFN  YV+    +K  PV+IHRA+ GS+ER I 
Sbjct: 622 KIDIKIKDAIGRYHQCATIQLDFQLPIRFNLTYVSKDGDDKKRPVIIHRAILGSVERMIA 681

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FRNETINYKI 595
           I+ EN+ G  P WLSP Q +V  +  +  +YA ++++         + D   + T+N KI
Sbjct: 682 ILSENYGGKWPFWLSPRQVMVIPVGPTCEKYALQVSSEFFEEGFMADVDLDHSCTLNKKI 741

Query: 596 REHSIKKIPIII 607
           R   + +   I+
Sbjct: 742 RNAQLAQYNFIL 753


>gi|253580110|ref|ZP_04857377.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251848629|gb|EES76592.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 653

 Score =  567 bits (1461), Expect = e-159,   Method: Composition-based stats.
 Identities = 232/646 (35%), Positives = 348/646 (53%), Gaps = 19/646 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T  DGS K +    +  D+A  IS  LA+ A A  +NG+V DL   +  +  + I+T +
Sbjct: 3   VTLKDGSKKEYAEAKSVIDIAYDISEGLARAACAGEVNGEVVDLRTVIDSDCELNILTAK 62

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D + LAV+RH+ +H++A+AVQ+++P+ +VAIGP I+ GFYYDFD   PFS D+L  IEK+
Sbjct: 63  DEKGLAVLRHTASHVLAQAVQTLFPDAKVAIGPSIDTGFYYDFDCP-PFSRDDLDAIEKE 121

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M++II + +   +   S E A   F+ K E YKVE++E +P    ++ Y QG+W DLC G
Sbjct: 122 MKKIIKKGAKIERFTKSREDAIAYFQEKNEPYKVELIEDLPEGSEISFYSQGDWTDLCAG 181

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PH+ S   VK F KL+  + AYWRG     ML+RIYGTA+ ++ EL ++L  +EE++KRD
Sbjct: 182 PHLMSVKGVKAF-KLLSSSSAYWRGSEKNAMLTRIYGTAYASKDELKEHLEQMEEAKKRD 240

Query: 246 HRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQH 303
           H KL REM +F      G G+      G  + Q L  ++   + K  Y    TP +    
Sbjct: 241 HNKLGREMKIFTTVDVIGQGLPLIMPNGVIMMQELQRWIEDEETKRGYIRTKTPLMAKSD 300

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           L++ SGHWD Y+  MF +    D   D   FAL+PM CP    V+     SYR+LP+R  
Sbjct: 301 LYKISGHWDHYKEGMFVL---GDEETDKEVFALRPMTCPFQYYVYKAEQHSYRDLPLRYG 357

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           E  +++RNE SG +HGL RVR FT  + H+    +QM  E      L     +  G E+ 
Sbjct: 358 ETSTLFRNEDSGEMHGLTRVRQFTISEGHLIVRPDQMVKEFKDCIALAQYCLQVLGVEED 417

Query: 424 MVKL-----STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           +            EK +G   +W+  E  ++ +L+ +       I     +GE AFYGPK
Sbjct: 418 VTYHLSKWDPNNREKYIGDAEVWNQTEAHIRQMLEELN------IPFTEDVGEAAFYGPK 471

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +   K+  G++    TIQ D  L  +F+ +Y++ + EK  P +IHR   G  ER +  +
Sbjct: 472 VDINAKNVYGKEDTMITIQWDALLAEQFDMYYIDENGEKQRPYIIHRTSMGCYERTLAWL 531

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE + G  P WL P Q  V  I+     YA ++   LK + +    D R+E + YKIRE 
Sbjct: 532 IEKYAGMFPTWLCPEQVRVIPISEKFHNYAAKVEAQLKENGIRCSVDQRSEKMGYKIREA 591

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            + ++P ++I G KE  E  + +R           L D +  + +E
Sbjct: 592 RLARVPYMLIVGAKEEEEGKVSVRSRYLGDEGMKDLGDFLAAIKEE 637


>gi|124010058|ref|ZP_01694720.1| threonyl-tRNA synthetase [Microscilla marina ATCC 23134]
 gi|123983945|gb|EAY24340.1| threonyl-tRNA synthetase [Microscilla marina ATCC 23134]
          Length = 578

 Score =  567 bits (1461), Expect = e-159,   Method: Composition-based stats.
 Identities = 241/587 (41%), Positives = 359/587 (61%), Gaps = 21/587 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
           S+IK+T PDGS++ +P   TG +VA SIS  LA+  +   +NG+V + S P+  + ++ +
Sbjct: 2   SNIKITLPDGSVREYPAGTTGHEVALSISEGLARNVLTAKVNGEVWESSRPIHEDATVSL 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDK--EQPFSSDE 118
           +T +D        HS AH++AEAV++++P  +  IGP IE G FYYD D   +   + + 
Sbjct: 62  LTWKDEDGKQAFWHSSAHLLAEAVEALYPGTKFGIGPSIESGGFYYDIDTGDDVVINEEA 121

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
             +IE KM E+  + + F ++ +S  +A E F  K + YK+E+++ +     +T Y QG 
Sbjct: 122 FPKIEAKMLELAKQKNEFARKEVSKAEAIEYFTEKGDEYKLELIDRL-EDGTITFYTQGN 180

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + DLCRG H+ STG +K   KL  VAGAYW G ++R  L+RIYG  +  Q+EL ++L  L
Sbjct: 181 FTDLCRGGHIPSTGLIKAA-KLTNVAGAYWLGQTDRKQLTRIYGITFPKQKELKEHLALL 239

Query: 239 EESEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINT 296
           EE++KRDHRKL +E++LF  +   G G+  W  KG  + + L ++MRR +IK  Y  + T
Sbjct: 240 EEAKKRDHRKLGKELELFTFSERVGKGLPLWLPKGALLRERLENFMRRAQIKAGYSPVVT 299

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +  + L++ SGHW+ Y  + F       T ++   F LKPMNCP H  ++    +SY+
Sbjct: 300 PHIGSKKLYETSGHWEKYGEDSFQ---PIATPQEGEEFMLKPMNCPHHCEIYASKPRSYK 356

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +LP+RLAEFG+VYR E SG LHGL RVRGFTQDDAH+FCT  Q+  E  K+ +L++ ++ 
Sbjct: 357 DLPLRLAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCTPAQVKEEFGKVIDLVLYVFS 416

Query: 417 DFGFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
             GFE    ++S R  +      G D  W+ AE  +  V      ++Q  + T   LGE 
Sbjct: 417 ALGFEDYTAQISLRDPENKSKYFGKDEDWEQAEQAIIDV------AAQKGLQTVTELGEA 470

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           AFYGPK ++++KDA+ R WQ GT+Q+D+ LP RF   Y  S +E+  PVMIHRA FGS+E
Sbjct: 471 AFYGPKLDFMVKDALKRKWQLGTVQLDYQLPDRFELEYTGSDNERHRPVMIHRAPFGSLE 530

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH 579
           RFI ++ E+  G  PLWL+P Q  +  I+    +YAQE+   L+ + 
Sbjct: 531 RFIAVLTEHCAGKFPLWLAPEQIAILPISQKFHDYAQEVYAQLEEND 577


>gi|310287485|ref|YP_003938743.1| threonyl-tRNA synthetase [Bifidobacterium bifidum S17]
 gi|309251421|gb|ADO53169.1| threonyl-tRNA synthetase [Bifidobacterium bifidum S17]
          Length = 676

 Score =  567 bits (1461), Expect = e-159,   Method: Composition-based stats.
 Identities = 242/667 (36%), Positives = 366/667 (54%), Gaps = 43/667 (6%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           S I +T  +G  K      TG ++         K  +AV +NG++ DL  P+ +G ++E 
Sbjct: 4   SSISITV-NGEAKEVEATTTGVELFAD-----DKDIIAVRLNGELRDLCTPLSDGDAVEP 57

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +  +    L ++RHS  H+MA+AVQ ++P V++ +GPII+DGFYYDF  ++PF+ D+L  
Sbjct: 58  VAIDSEDGLGIMRHSATHVMAQAVQELFPNVKLGVGPIIKDGFYYDFQVDEPFTPDDLKA 117

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPA-----------KEN 170
           IEK MQ I+     F ++ ++ E+A +  E   + +K+E++E   A            + 
Sbjct: 118 IEKHMQRIVKSAQSFRRRVVTEEEALK--EETDQPFKIELIEDKEAHLDPSTATEVSGKE 175

Query: 171 VTLYRQGE------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTA 224
           ++ Y   +      W DLCRGPH+ +T  +K F K+ + A AYWRG    P + RIYGTA
Sbjct: 176 LSFYDNVDRDGNTVWKDLCRGPHLPNTRFIKAF-KIERSAAAYWRGSEKNPTMQRIYGTA 234

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM 283
           W T+++L  Y   LEE+ KRDHRKL  EMDLF   E+ G G+  +H KG  +   +  Y 
Sbjct: 235 WATKEDLKAYQTRLEEAAKRDHRKLGAEMDLFSFPEEIGPGLAVFHPKGAAVINAMEDYS 294

Query: 284 RR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT-------IKDLRTFA 335
           R    K  Y  + TP +    L++ SGH   Y+  M+     D+         K    + 
Sbjct: 295 REMHRKHHYSFVQTPHITKGGLYETSGHLHWYKDGMYPPMHLDEEYDADGNITKPGADYY 354

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC 395
           LKPMNCP H  +F    +SYRELP+RL EFG+VYR E SG +HGL RVRG TQDD+H++C
Sbjct: 355 LKPMNCPMHNLIFKSRQRSYRELPLRLFEFGTVYRYEKSGEVHGLTRVRGLTQDDSHIYC 414

Query: 396 TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDT 454
           T+EQM +E   +   ++++ KDFG     ++LST+     VGSD +W++A   ++ V + 
Sbjct: 415 TREQMKDELTSLLTFVLNLLKDFGLSDFYLELSTKDPDKYVGSDEIWEEATRTLREVAEA 474

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH 514
                   ++     G  AFYGPK     +DAIGR WQ  TIQ+DFNLP RF   Y+   
Sbjct: 475 ------SHLDLVADPGGAAFYGPKISVQARDAIGRTWQVSTIQLDFNLPERFQLEYIAKD 528

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANL 574
                PVMIHRA+FGSIERF  +++E++ G  P WL+P+Q +   +      +       
Sbjct: 529 GTHQRPVMIHRALFGSIERFFAVLLEHYAGAFPAWLAPVQVLGVPVADEFAPHLAGFVKS 588

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           L+   +  E D+ ++    KIR  S  K+P I+I G+++ +  ++  R    +    V +
Sbjct: 589 LEDEMVRCEIDYSDDRFGKKIRNASKSKVPFILIVGEEDMNNNAVSFRFRDGSQLNGVPV 648

Query: 635 LDAIPIL 641
            +A   +
Sbjct: 649 DEAREKI 655


>gi|296228691|ref|XP_002759919.1| PREDICTED: threonyl-tRNA synthetase, mitochondrial isoform 1
           [Callithrix jacchus]
          Length = 718

 Score =  567 bits (1460), Expect = e-159,   Method: Composition-based stats.
 Identities = 225/670 (33%), Positives = 356/670 (53%), Gaps = 30/670 (4%)

Query: 2   PSDIKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           P  IK++ P G  +     + T   +A  IS +LA  AVA  +NG++ DL  P+  +  +
Sbjct: 58  PRTIKISLPGGQKVDAVAWNTTPYQLARQISSTLADTAVAAQVNGELYDLERPLETDSDL 117

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD--KEQPFSSD 117
             +T + P   AV  HS  H++  A +  +    +  GP  E+GFY+DF   KE+     
Sbjct: 118 RFLTFDSPEGKAVFWHSSTHVLGAAAEQ-FLGAVLCRGPSTENGFYHDFFLGKERTIRGS 176

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           EL  +E+  QE+ A   PF +   S ++   LF+     +K+ ++E        T+Y  G
Sbjct: 177 ELPVLERICQELTAAAQPFRRLEASRDQLHRLFK--DNPFKLHLIEEKITGPTATVYGCG 234

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
              DLCRGPH+R TGQ+     L   +  +    +    L R+ G ++ T + L  +  +
Sbjct: 235 TLVDLCRGPHLRHTGQIGGLKLLSNSSSLWRSSGAPET-LQRVSGISFPTAELLRAWEAW 293

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINT 296
            E++  +DHR++ +E +LF   E   G  F+  +G +++  L++++R +  +  + E+ T
Sbjct: 294 REKAGLQDHRRIGKEQELFFFHELSPGSCFFLPRGTRVYNALVAFIRAEYARRGFFEVKT 353

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCA----------DDTIKDLRT-FALKPMNCPGHV 345
           P +    LW+QSGHW+ Y+ +MFAV+            D + +      ALKPMNCP H 
Sbjct: 354 PTLFSTKLWEQSGHWEHYQEDMFAVQPPGSDRPASSQSDHSTRHTTDTLALKPMNCPAHC 413

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +F H  +S+RELP+RLA+FG+++R E SG L GL R+R F QDDAH+FCT +Q+  E  
Sbjct: 414 LMFAHRPRSWRELPLRLADFGALHRAEASGGLCGLTRLRCFQQDDAHIFCTTDQLEAEIQ 473

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
              + + S+Y   GF   +  LSTRP   +G   LWD AE +++  L             
Sbjct: 474 SCLDFLRSVYAVLGFSFRLA-LSTRPSGFLGDPCLWDQAEQVLQQALKEFGEPWD----- 527

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
            +  G+GAFYGPK +  L DA+GR  QCGTIQ+DF LP RF+  Y         PV+IHR
Sbjct: 528 -LNSGDGAFYGPKIDVHLHDALGRPHQCGTIQLDFQLPLRFDLQYKGQAGALERPVLIHR 586

Query: 526 AVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD 585
           AV GS+ER +G++ E+ +G  PLWLSP Q +V  + +   EYA+E    L++  L  + D
Sbjct: 587 AVLGSVERLLGVLAESCRGKWPLWLSPFQVVVIPVGTEQEEYARETQQSLQAAGLVCDLD 646

Query: 586 FRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT-- 642
             +  T++ +IR   +       + G KE S+ ++ IR   +    + SL +A+  L   
Sbjct: 647 ADSRLTLSRRIRRAQLAHYNFQFVVGQKEQSKSTVNIRTRDNRLLGEWSLPEAVQRLVVL 706

Query: 643 KESLPPDCQK 652
           + +  P+ ++
Sbjct: 707 QNTRVPNAEE 716


>gi|311064400|ref|YP_003971125.1| threonyl-tRNA synthetase [Bifidobacterium bifidum PRL2010]
 gi|310866719|gb|ADP36088.1| ThrS Threonyl-tRNA synthetase [Bifidobacterium bifidum PRL2010]
          Length = 676

 Score =  567 bits (1460), Expect = e-159,   Method: Composition-based stats.
 Identities = 242/667 (36%), Positives = 366/667 (54%), Gaps = 43/667 (6%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           S I +T  +G  K      TG ++         K  +AV +NG++ DL  P+ +G ++E 
Sbjct: 4   SSISITV-NGEAKEVEATTTGVELFAD-----DKDIIAVRLNGELRDLCTPLSDGDAVEP 57

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +  +    L ++RHS  H+MA+AVQ ++P V++ +GPII+DGFYYDF  ++PF+ D+L  
Sbjct: 58  VAIDSEDGLGIMRHSATHVMAQAVQELFPNVKLGVGPIIKDGFYYDFQVDEPFTPDDLKA 117

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPA-----------KEN 170
           IEK MQ I+     F ++ ++ E+A +  E   + +K+E++E   A            + 
Sbjct: 118 IEKHMQRIVKSAQSFRRRVVTEEEALK--EETDQPFKIELIEDKEAHLDPSTATEVSGKE 175

Query: 171 VTLYRQGE------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTA 224
           ++ Y   +      W DLCRGPH+ +T  +K F K+ + A AYWRG    P + RIYGTA
Sbjct: 176 LSFYDNVDRDGNTVWKDLCRGPHLPNTRFIKAF-KIERSAAAYWRGSEKNPTMQRIYGTA 234

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM 283
           W T+++L  Y   LEE+ KRDHRKL  EMDLF   E+ G G+  +H KG  +   +  Y 
Sbjct: 235 WATKEDLKAYQTRLEEAAKRDHRKLGAEMDLFSFPEEIGPGLAVFHPKGAAVINAMEDYS 294

Query: 284 RR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT-------IKDLRTFA 335
           R    K  Y  + TP +    L++ SGH   Y+  M+     D+         K    + 
Sbjct: 295 REMHRKHHYSFVQTPHITKGGLYETSGHLHWYKDGMYPPMHLDEEYDADGNITKPGADYY 354

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC 395
           LKPMNCP H  +F    +SYRELP+RL EFG+VYR E SG +HGL RVRG TQDD+H++C
Sbjct: 355 LKPMNCPMHNLIFKSRQRSYRELPLRLFEFGTVYRYEKSGEVHGLTRVRGLTQDDSHIYC 414

Query: 396 TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDT 454
           T+EQM +E   +   ++++ KDFG     ++LST+     VGSD +W++A   ++ V + 
Sbjct: 415 TREQMKDELTSLLTFVLNLLKDFGLSDFYLELSTKDPDKYVGSDEIWEEATRTLREVAEA 474

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH 514
                   ++     G  AFYGPK     +DAIGR WQ  TIQ+DFNLP RF   Y+   
Sbjct: 475 ------SHLDLVADPGGAAFYGPKISVQARDAIGRTWQVSTIQLDFNLPERFQLEYIAKD 528

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANL 574
                PVMIHRA+FGSIERF  +++E++ G  P WL+P+Q +   +      +       
Sbjct: 529 GTHQRPVMIHRALFGSIERFFAVLLEHYAGAFPAWLAPVQVLGVPVADEFAPHLAGFVKS 588

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           L+   +  E D+ ++    KIR  S  K+P I+I G+++ +  ++  R    +    V +
Sbjct: 589 LEDEMVRCEIDYSDDRFGKKIRNASKSKVPFILIVGEEDMNNNAVSFRFRDGSQLNGVPV 648

Query: 635 LDAIPIL 641
            +A   +
Sbjct: 649 DEAREKI 655


>gi|323487567|ref|ZP_08092859.1| hypothetical protein HMPREF9474_04610 [Clostridium symbiosum
           WAL-14163]
 gi|323399124|gb|EGA91530.1| hypothetical protein HMPREF9474_04610 [Clostridium symbiosum
           WAL-14163]
          Length = 653

 Score =  567 bits (1460), Expect = e-159,   Method: Composition-based stats.
 Identities = 229/655 (34%), Positives = 356/655 (54%), Gaps = 21/655 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T  DGS + +    +  D+A  IS  LA+ A A  ++G+  DL   V  + S+ I+T  
Sbjct: 3   ITLKDGSQREYTEPKSIIDIAFDISEGLARAACAGELDGRTVDLRTVVEKDSSLNILTAR 62

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           DP  L+ +RH+C+H++AEAV+ + P+ ++ IGP IE+GFYYDFD E PF+ ++L  +EK+
Sbjct: 63  DPEGLSAMRHTCSHVLAEAVKRMRPQAKLTIGPSIENGFYYDFDTE-PFTREDLDNLEKE 121

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG-EWFDLCR 184
           M++II       K  L+ E A  L E + E YKVE+++ +P  E ++ YRQG ++ DLC 
Sbjct: 122 MKKIIKEGQKLEKFTLTREAAIRLMEERDEPYKVELIQELPENEEISFYRQGGDFTDLCA 181

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPH+ ST  +K F KL+  + AYWRGDS++  L RIYGTA+ +++EL  YL  LE+ +KR
Sbjct: 182 GPHLMSTKPIKAF-KLISSSMAYWRGDSSKAQLQRIYGTAFASKEELNAYLEHLEDIKKR 240

Query: 245 DHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEINTPQVLD 301
           DH KL REM LF      G G+      G KI Q L  ++     +   Y    TP +  
Sbjct: 241 DHNKLGREMRLFTTVDVIGQGLPLLMPNGVKIVQRLQRWVEDLEDNEWGYIRTKTPLMAK 300

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             L++ SGHWD Y+  MF +    D   D   FAL+PM CP    V+ +   SYRELP+R
Sbjct: 301 SDLYKISGHWDHYKDGMFVL---GDEETDKEVFALRPMTCPFQYYVYKNDQHSYRELPLR 357

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
            +E  +++RNE SG +HGL RVR FT  + H+    +Q+  E     +L +      G +
Sbjct: 358 YSETSTLFRNEDSGEMHGLTRVRQFTISEGHLIIRPDQVEEELAGCLDLAVHCLTTLGLQ 417

Query: 422 KIMVKL-----STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
             +            EK +G +  W+  +  ++ +L       +  +      GE AFYG
Sbjct: 418 DDVTYRLSKWDPDNREKYLGDEEYWEKTQGKIRDLL------VEKNVPFTEADGEAAFYG 471

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK +   K+  G++    TIQ+D  +   F+ ++++ + +K  P +IHR   G  ER + 
Sbjct: 472 PKIDIQAKNVYGKEDTMITIQLDCAIAENFDMYFIDQNGDKVRPYVIHRTSMGCYERTLA 531

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
            +IE + G  P WL P Q  V  I+     YA E+A  LK + +    D R+E I YKIR
Sbjct: 532 WLIEKYAGKFPTWLCPEQVRVLPISDKYESYAGEVAKELKKNGVFCSVDNRSEKIGYKIR 591

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           E  + KIP +++ G +E +++++ +R   +       L + I  + +E    + +
Sbjct: 592 ETRLDKIPYMLVVGQQEEADKAVSVRSRFAGDEGVKPLGEFIEQICREIRTKEIR 646


>gi|206603264|gb|EDZ39744.1| Threonyl-tRNA synthetase [Leptospirillum sp. Group II '5-way CG']
          Length = 617

 Score =  567 bits (1460), Expect = e-159,   Method: Composition-based stats.
 Identities = 257/590 (43%), Positives = 361/590 (61%), Gaps = 14/590 (2%)

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T ++  SL  +RHS AH +A+AV+ ++P  QV IGP  E+GFYYDF  E+PF+ ++L +I
Sbjct: 33  TEKETESLKALRHSAAHTLAQAVKKLYPSAQVGIGPATEEGFYYDFRYERPFTPEDLERI 92

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M+ +I    P +++ +S  +A +LF  + E +K+E+++ IP    +T+Y QGE+ DL
Sbjct: 93  ENEMKSLIRSSLPIVRKPVSRGEAEKLFRERNEPFKLELIQGIPEDAEITVYEQGEFVDL 152

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG++     L   + AYW+G  + P L RIYGTA+++++EL  YL   EE +
Sbjct: 153 CRGPHVSSTGEIPAVRLL-STSSAYWKGVESNPSLQRIYGTAFHSEKELADYLRQQEEVQ 211

Query: 243 KRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVL 300
           +RDHRKL RE+ LF   ++   G++ W  KG +I +TL    +    +  Y  + TP + 
Sbjct: 212 RRDHRKLGRELGLFRTLDEKGAGLVLWLPKGSQIRRTLEELWKILHDRHGYRYVYTPHIA 271

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
              LW QSGHWD Y+ +MF     + T      + LKPMNCP H+ +F   ++SYR+LP+
Sbjct: 272 RLDLWMQSGHWDYYQDSMFRPMETEGTA-----YELKPMNCPFHILIFRESVQSYRDLPI 326

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RL+E G+VYR E SG+LHGLMRVRGFTQDDAH+FC  E +  E   +  L+  +   FGF
Sbjct: 327 RLSELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCKPEDLAGEIRNVLALVDQMIGRFGF 386

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
               V LSTRPEK VGSD  W+ A   ++  L+      +  I   V  GEG FYGPK +
Sbjct: 387 TDRTVYLSTRPEKSVGSDENWEMATGSLRKALE------ESGIPYEVDPGEGVFYGPKID 440

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
               DAIGR WQ  TIQVDFNLP +F+  Y N   E C P+MIHRA+FGSIERF GI+IE
Sbjct: 441 IKFHDAIGRAWQLSTIQVDFNLPEKFDLTYRNDSGEPCRPIMIHRALFGSIERFFGILIE 500

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           ++ G  PLWL+P Q  + TI    + YAQ + + LK   +  E DFRNE I +K+RE  +
Sbjct: 501 HYAGAFPLWLAPEQVRIMTIADRHIPYAQTVLSRLKDRGVRAEGDFRNEKIGFKVREAQM 560

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDC 650
           +KIP + + GD+E  E  + +R           L   +  L + S PP+ 
Sbjct: 561 EKIPEMWVVGDREVEETRVSVRSREGEKKDLCPLESELEDLFRRSFPPEM 610


>gi|221633051|ref|YP_002522276.1| threonyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
 gi|221156502|gb|ACM05629.1| threonyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
          Length = 596

 Score =  566 bits (1459), Expect = e-159,   Method: Composition-based stats.
 Identities = 246/580 (42%), Positives = 367/580 (63%), Gaps = 14/580 (2%)

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           E    LA +RHSCAH+MA+AV  ++P  ++ IGP I DGFYYDFD  +P + ++L  IE+
Sbjct: 17  EHELDLARMRHSCAHVMAQAVLELFPGAKLGIGPAIADGFYYDFDLPRPLTPEDLEHIER 76

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
           +M+EI A   PF+++ ++ E+AREL   + + YK+E++   P  E +T Y    + DLCR
Sbjct: 77  RMEEIKAAAYPFVRRVVTREEAREL--FRDQPYKLELIAEFPPDEVITTYTHDGFTDLCR 134

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHVR T Q+  FFKL++V+GAYWRGD  RP L RIYGT+W T+++L  YL+ LEE+E+R
Sbjct: 135 GPHVRDTSQIG-FFKLLRVSGAYWRGDERRPQLQRIYGTSWPTREQLDAYLHRLEEAERR 193

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQH 303
           DHR+L RE++LFH      G+ +W  KG KI   L+ + R++ +   Y+EI  P + D+ 
Sbjct: 194 DHRRLGRELELFHFDPTAPGMPYWLPKGLKILNLLLDFWRQEHEKRGYQEIAAPLINDKS 253

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+ SGHWD YR NMF ++  +        + +KPMNCP  + V+N   +SYR+LP+RL+
Sbjct: 254 LWEVSGHWDHYRENMFLIQLDEHLT-----YGVKPMNCPNAMIVYNLKKRSYRDLPLRLS 308

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           +   ++R E SG+LHGL+RVR F QDDAH+F T++Q+  E  +I  +    Y  FG    
Sbjct: 309 DCDILHRYERSGTLHGLLRVRKFQQDDAHIFVTEDQIEEEFARILEIAQLFYGIFGLRYT 368

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           + +L TRP   +G    WD AE  ++ +LD          N  +  GEGAFYGPK + ++
Sbjct: 369 L-RLGTRPADFMGDPETWDKAEAALQRILDRHAGPG----NYLIGEGEGAFYGPKIDILM 423

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +DA+GR WQ GTIQ+DF LP RF   Y +    +  PV+IHR ++GS+ERFIGI+IE+F 
Sbjct: 424 EDALGRQWQTGTIQLDFQLPRRFGCTYTDRDGTEKTPVVIHRVIYGSLERFIGILIEHFA 483

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P+WL+P+QA +  I    + YA  + + L+   L +E D  +E +  KIR   ++KI
Sbjct: 484 GAFPVWLAPVQATIIPIADRHLPYAYRVRDRLRDAGLRVEVDDGDERMQAKIRSAQLQKI 543

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           P +++ GD+E +E S+ +R   +     +S+   I ++ +
Sbjct: 544 PYMLVVGDREVNEESLAVRLRTNENIGSMSIERFITMVQR 583


>gi|302669952|ref|YP_003829912.1| threonyl-tRNA synthetase ThrS [Butyrivibrio proteoclasticus B316]
 gi|302394425|gb|ADL33330.1| threonyl-tRNA synthetase ThrS [Butyrivibrio proteoclasticus B316]
          Length = 602

 Score =  566 bits (1459), Expect = e-159,   Method: Composition-based stats.
 Identities = 236/594 (39%), Positives = 363/594 (61%), Gaps = 19/594 (3%)

Query: 55  REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPF 114
           R+G +  ++ +D        H+ AH++A+AV+ ++P+ + AIGP IE+GFYYDFD    F
Sbjct: 22  RDGQVMEVSFDDNDGKKAFWHTSAHVLAQAVKRLYPQAKCAIGPAIENGFYYDFDFGFSF 81

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
           + D L  IE +M+ II          +S + A    E   E +K+E++  +P  E ++ Y
Sbjct: 82  NEDNLGAIEDEMRRIIKESLSLQVYEMSKKDAISYMEKADEPFKLEMIRELPEGEVISFY 141

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
           +QG++ + C GPH+ +   +K   KL+ VAGAYWRGD +  ML+RIYG ++     +  +
Sbjct: 142 KQGDYAEFCAGPHIVNVSHIK-AVKLLSVAGAYWRGDEHNKMLTRIYGISFPKASLMDDH 200

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEE 293
           L+ LEE++ RDHR L +E++LF + ++G G+ F+  KG  +   LI Y R+  +++ Y+E
Sbjct: 201 LHQLEEAKARDHRVLGKELELFALMDEGPGLPFYFPKGLVLKNLLIDYWRKIHVREGYQE 260

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           I+TP +L + LW++SGHWD YR NM+       T  D   +A+KPMNCPG + V+     
Sbjct: 261 ISTPIMLTKALWEKSGHWDHYRDNMYV------TSVDDMDYAIKPMNCPGGMLVYKSKPH 314

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYRE P+R  E G V+R E SG+LHGLMR R FTQDDAH+F  ++Q+ +E   +  LI  
Sbjct: 315 SYREFPIRCGELGIVHRAEKSGTLHGLMRARCFTQDDAHIFMREDQVLSEIQGVMRLIDE 374

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           +Y  FGF   + +LSTRPE  +GSD  W  A   +K  ++ +           +  G+GA
Sbjct: 375 VYSKFGFPYEI-ELSTRPENSIGSDEDWQLATESLKAAVEGMGKP------YKINEGDGA 427

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK ++ +KD+IGR WQCGTIQ+DF LP RF+  Y+    ++  P+M+HR VFGSI+R
Sbjct: 428 FYGPKLDFHVKDSIGRTWQCGTIQLDFQLPQRFDLEYIGEDGKEHRPIMLHRVVFGSIDR 487

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           F+GI+IE++ G  P+WLSP+Q  V  ++   ++YA+EI   L    +  E D R+E + +
Sbjct: 488 FMGILIEHYAGKFPVWLSPVQVKVLPVSDKYLDYAKEIMAKLYEEGIRAELDDRDEKLGF 547

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRF----GSTTTQKVSLLDAIPILTK 643
           KIRE  ++K+P +II G+KE   R + +R+           ++ + D I +L +
Sbjct: 548 KIREARMQKVPYMIIVGEKEKDNRLVSVRQRDAEQDKQEIGEMDMADFIDLLKR 601


>gi|315656661|ref|ZP_07909548.1| threonine--tRNA ligase [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
 gi|315492616|gb|EFU82220.1| threonine--tRNA ligase [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
          Length = 669

 Score =  566 bits (1459), Expect = e-159,   Method: Composition-based stats.
 Identities = 253/674 (37%), Positives = 377/674 (55%), Gaps = 47/674 (6%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           S+I +T  DG         TG D+         K+ +A  ING+  DL   + +G ++E 
Sbjct: 2   SEINVTI-DGKATQIESTITGEDLYRD-----RKEVIAYFINGQARDLYRELHDGDTVEA 55

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           IT +    L ++RHSC H+MA+AV+ + P V+  IGP IE+GFYYDF  ++PF+ ++L  
Sbjct: 56  ITIDSEMGLNILRHSCTHVMAQAVKQVRPNVKYGIGPFIENGFYYDFGVDEPFTPEDLIA 115

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL------------------- 162
           IEK M  I   D  F+++ ++ ++ R   E   + YK+E++                   
Sbjct: 116 IEKYMARICKEDQKFVRRVVTEDEGRA--ELADQPYKLELIGLKGTDSDNDQAAAGASVE 173

Query: 163 ---ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSR 219
                +   +NV    +  W DLCRGPHV ST  +   FKLMKV+ AYWRGD     L R
Sbjct: 174 VGGSELTIYDNVRKNGEVAWKDLCRGPHVPSTRLLNGVFKLMKVSAAYWRGDQANDSLQR 233

Query: 220 IYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQT 278
           IYGTAW T+ +L +Y+  +EE+ KRDHR+L  E+DLF   E+ GSG+  +H KG  +   
Sbjct: 234 IYGTAWATKDDLKEYVTRMEEAAKRDHRRLGNELDLFSFPEEIGSGLAVFHPKGAMVRME 293

Query: 279 LISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT-------IKD 330
           + +Y RR  +++ Y  + TP V    L++ SGH + Y+  MF     D+         K+
Sbjct: 294 MENYSRRRHLEEGYSFVYTPHVTKGQLFETSGHLEWYKDGMFPPMRVDEECDDQGNVTKE 353

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
              + LKPMNCP H  ++    +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDD
Sbjct: 354 GFDYYLKPMNCPMHNLIYKSRSRSYRELPLRLFEFGTVYRYEKSGVVHGLTRGRGFTQDD 413

Query: 391 AHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMK 449
           +H++CT+EQM +E  K+   ++ + KD+G +   ++LST+     VGSD +W++A N + 
Sbjct: 414 SHIYCTREQMKDELTKLLTFVLDLLKDYGLDDFYLELSTKNPHKFVGSDEIWEEATNTLA 473

Query: 450 GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAF 509
            V           +         AFYGPK     +DAIGR WQ  TIQ+DFNLP RF+  
Sbjct: 474 EVATASG------LELVPDPEGAAFYGPKISVQARDAIGRTWQMSTIQLDFNLPERFDLE 527

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQ 569
           Y  +   +  PVMIHRA+FGSIERF G++ E++ G  P WL+P+Q  +  +  +  +Y +
Sbjct: 528 YTAADGSRQRPVMIHRALFGSIERFFGVLTEHYAGAFPAWLAPVQVRLVPVAEAFNDYCE 587

Query: 570 EIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           +IAN L++ ++ +E D  ++    KIR  +  KIP  +I G ++A   ++  R  G    
Sbjct: 588 DIANRLRAENVRVEVDTTDDRFGKKIRNAAKDKIPFTLIAGGEDAEANAVSFRYRGGEQK 647

Query: 630 QKVSLLDAIPILTK 643
             V +  AI  + +
Sbjct: 648 NGVPIDQAIAEILE 661


>gi|119963884|ref|YP_948047.1| threonyl-tRNA synthetase [Arthrobacter aurescens TC1]
 gi|166223318|sp|A1R735|SYT_ARTAT RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|119950743|gb|ABM09654.1| threonyl-tRNA synthetase [Arthrobacter aurescens TC1]
          Length = 669

 Score =  566 bits (1459), Expect = e-159,   Method: Composition-based stats.
 Identities = 250/675 (37%), Positives = 372/675 (55%), Gaps = 45/675 (6%)

Query: 1   MPSDIKLTFP-DGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS- 58
           M    ++T   DG         TG+++         +  V   +NG + DL   + EG+ 
Sbjct: 1   MSDAQQITLIVDGEETKVTEGTTGAELFFE-----RRDVVVARVNGVLKDLDQVLTEGAD 55

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           +E +T + P  L V+RHS AH+MA+AVQ + PE ++ IGP I DGFY+DFD   PF+ ++
Sbjct: 56  VEGVTIDSPDGLNVLRHSTAHVMAQAVQQLRPEAKLGIGPYITDGFYFDFDVADPFTPED 115

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK---------- 168
           L  +EK MQ+II ++  F+++ ++ E+ARE      E YK+E+L                
Sbjct: 116 LRTLEKMMQKIINQNQKFVRRVVTEEEAREAMA--NEPYKLELLGKKNDASDAAEGVNVE 173

Query: 169 ---ENVTLYRQGE-------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLS 218
               ++T+Y   +       W DLCRGPH+++T  +   F L + + AYW G+ N   L 
Sbjct: 174 VGAGDITIYDNVDRKSGESIWCDLCRGPHLQNTKIISNAFALTRSSAAYWLGNQNNQQLQ 233

Query: 219 RIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQ 277
           RIYGTAW T++ L  Y   + E+E+RDHRKL  E+DLF   ++ GSG+  +H KG  I +
Sbjct: 234 RIYGTAWPTKEALKAYQERIAEAERRDHRKLGVELDLFSFPDELGSGLPVFHPKGGIIRK 293

Query: 278 TLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL----- 331
            +  Y R R +   YE + TP +   HL++ SGH D Y+  MF     D    +      
Sbjct: 294 AMEDYSRQRHVDAGYEFVYTPHITKGHLYEVSGHLDWYKDGMFPAMQVDAEFNEDGSVRK 353

Query: 332 --RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
             + + LKPMNCP H  +F    +SYRELP+RL EFGSVYR E SG +HGL RVRG TQD
Sbjct: 354 PAQDYYLKPMNCPMHNLIFRSRGRSYRELPLRLFEFGSVYRYEKSGVVHGLTRVRGMTQD 413

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLS-TRPEKRVGSDALWDDAENIM 448
           DAH++CT+EQM +E     N ++ + KD+G +   ++LS    EK VG DA W++A   +
Sbjct: 414 DAHIYCTREQMKDELTTTLNFVLGLLKDYGLDDFYLELSTKNEEKFVGDDAAWEEATRTL 473

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
             V +         ++     G  AFYGPK     KDA+GR WQ  TIQ+DFNLP RF  
Sbjct: 474 SEVAEASG------LHLVPDPGGAAFYGPKISVQAKDALGRTWQMSTIQLDFNLPERFEL 527

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYA 568
            Y  +   +  PVMIHRA+FGS+ERF+G++ E++ G  P WL+P+Q +   +  +  +Y 
Sbjct: 528 EYQAADGTRQRPVMIHRALFGSVERFMGVLTEHYAGAFPAWLAPVQVVGIPVAETFNDYM 587

Query: 569 QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
            ++   LK+  +  E D  ++    KIR  S  KIP ++I G ++A   ++  R    + 
Sbjct: 588 FDVVGQLKAAGIRAEVDISSDRFPKKIRTASKDKIPFVLIAGGEDAEAGAVSFRFRDGSQ 647

Query: 629 TQKVSLLDAIPILTK 643
              V + +A+  +  
Sbjct: 648 DNGVPVAEAVRRIVD 662


>gi|255507180|ref|ZP_05382819.1| threonyl-tRNA synthetase [Chlamydia trachomatis D(s)2923]
 gi|289525626|emb|CBJ15104.1| threonyl-tRNA synthetase [Chlamydia trachomatis Sweden2]
 gi|296435188|gb|ADH17366.1| threonyl-tRNA synthetase [Chlamydia trachomatis E/150]
 gi|296438907|gb|ADH21060.1| threonyl-tRNA synthetase [Chlamydia trachomatis E/11023]
          Length = 635

 Score =  566 bits (1459), Expect = e-159,   Method: Composition-based stats.
 Identities = 243/631 (38%), Positives = 366/631 (58%), Gaps = 19/631 (3%)

Query: 16  NFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIR 74
             P  A+  D+A  + +S         IN +  DLS  +++G ++  +T +DP+   +  
Sbjct: 12  ELPEGASAMDLANKMKQSHCFA--GALINDQEKDLSTTLQDGDTVLFLTWDDPKGREIFL 69

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDS 134
           H+ AHI+A+AV  +WP  Q  IGP+I+ GFYYDF      S ++   IE   + I     
Sbjct: 70  HTSAHILAQAVLRLWPSAQPTIGPVIDQGFYYDFA-NLSISEEDFPAIEAMAKTIAEEKF 128

Query: 135 PFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQV 194
           P  +Q    ++A  L    +  +K E++  +P +  ++ Y QGE+ DLCRGPH+ ST  V
Sbjct: 129 PISRQVFPDKEA-ALAYFSQNPFKAELIAELPEEVEISAYTQGEFLDLCRGPHLPSTAPV 187

Query: 195 KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMD 254
           K F KL++ + AYW+GD +R  L RIYG ++ T +EL ++L+ LEE++KRDHR L  ++D
Sbjct: 188 KAF-KLLRTSSAYWKGDPSRESLIRIYGVSFPTTKELKEHLHQLEEAKKRDHRVLGTKLD 246

Query: 255 LFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDS 313
           LF      +G+ F+H +G  ++  L+ Y +R   +  Y++I TPQ++++ LW+ SGHW++
Sbjct: 247 LFSQQTCSAGMPFFHPRGMVVWNALVDYWKRLHQRAGYQQIQTPQLMNRELWEISGHWEN 306

Query: 314 YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP 373
           Y+ NM+ +        D   +A+KPMNCPG +  +   L SYRE P+R+AE G V+R+E 
Sbjct: 307 YKENMYTLTV------DEEDYAIKPMNCPGCMLYYKTQLHSYREFPLRIAEIGHVHRHEL 360

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
           SG+L GLMRVR F QDDAHVF T EQ+  E L I NL+  +Y  FG E  +   +   + 
Sbjct: 361 SGALSGLMRVRTFHQDDAHVFLTPEQVEEETLNILNLVSELYGTFGLEYHLELSTRPEQG 420

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
            +GSD LW+ A   +K  L   +          +  GEGAFYGPK +  +KDAI R WQC
Sbjct: 421 TIGSDDLWELATEALKRALVKSQKP------FIISPGEGAFYGPKIDIHVKDAINRTWQC 474

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI 553
           GTIQ+D  LP RF+  Y N+  EK  P+M+HRA+FGSIERF+GI+IE+FKG  PLWLSP 
Sbjct: 475 GTIQLDMFLPERFDLKYTNAQGEKSTPIMLHRALFGSIERFLGILIEHFKGRFPLWLSPE 534

Query: 554 QAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
              + T+       AQE+A       + +  D  NE+++ KIR     ++  +I  GDKE
Sbjct: 535 HVRIITVADRHEARAQELAKHFSQMGIIVSVDSSNESVSKKIRNAQNMQVNYMITIGDKE 594

Query: 614 ASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
                + +R   +     +++     ++ +E
Sbjct: 595 LETHLLAVRIRDNRVLNDIAVEQFSHVILEE 625


>gi|323692292|ref|ZP_08106531.1| threonyl-tRNA synthetase [Clostridium symbiosum WAL-14673]
 gi|323503617|gb|EGB19440.1| threonyl-tRNA synthetase [Clostridium symbiosum WAL-14673]
          Length = 653

 Score =  566 bits (1459), Expect = e-159,   Method: Composition-based stats.
 Identities = 228/655 (34%), Positives = 355/655 (54%), Gaps = 21/655 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T  DGS + +    +  D+A  IS  LA+ A A  ++G+  DL   V  + S+ I+T  
Sbjct: 3   ITLKDGSQREYTEPKSIIDIAFDISEGLARAACAGELDGRTVDLRTVVEKDSSLNILTAR 62

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           DP  L+ +RH+C+H++AEAV+ + P+ ++ IGP IE+GFYYDFD E PF+ ++L  +EK+
Sbjct: 63  DPEGLSAMRHTCSHVLAEAVKRMRPQAKLTIGPSIENGFYYDFDTE-PFTREDLDNLEKE 121

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG-EWFDLCR 184
           M++II       K  L+ E A  L E + E YK E+++ +P  E ++ YRQG ++ DLC 
Sbjct: 122 MKKIIKEGQKLEKFTLTREAAIRLMEERDEPYKAELIQELPENEEISFYRQGGDFTDLCA 181

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPH+ ST  +K F KL+  + AYWRGDS++  L RIYGTA+ +++EL  YL  LE+ +KR
Sbjct: 182 GPHLMSTKPIKAF-KLISSSMAYWRGDSSKAQLQRIYGTAFASKEELNAYLEHLEDIKKR 240

Query: 245 DHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEINTPQVLD 301
           DH KL REM LF      G G+      G KI Q L  ++     +   Y    TP +  
Sbjct: 241 DHNKLGREMRLFTTVDVIGQGLPLLMPNGVKIVQRLQRWVEDLEDNEWGYIRTKTPLMAK 300

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             L++ SGHWD Y+  MF +    D   D   FAL+PM CP    V+ +   SYRELP+R
Sbjct: 301 SDLYKISGHWDHYKDGMFVL---GDEETDKEVFALRPMTCPFQYYVYKNDQHSYRELPLR 357

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
            +E  +++RNE SG +HGL RVR FT  + H+    +Q+  E     +L +      G +
Sbjct: 358 YSETSTLFRNEDSGEMHGLTRVRQFTISEGHLIIRPDQVEEELAGCLDLAVHCLTTLGLQ 417

Query: 422 KIMVKL-----STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
             +            EK +G +  W+  +  ++ +L       +  +      GE AFYG
Sbjct: 418 DDVTYRLSKWDPDNREKYLGDEEYWEKTQGKIRDLL------VEKNVPFTEADGEAAFYG 471

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK +   K+  G++    TIQ+D  +   F+ ++++ + +K  P +IHR   G  ER + 
Sbjct: 472 PKIDIQAKNVYGKEDTMITIQLDCAIAENFDMYFIDQNGDKVRPYVIHRTSMGCYERTLA 531

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
            +IE + G  P WL P Q  V  I+     YA E+A  LK + +    D R+E I YKIR
Sbjct: 532 WLIEKYAGKFPTWLCPEQVRVLPISDKYESYAGEVAKELKKNGVFCSVDNRSEKIGYKIR 591

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           E  + KIP +++ G +E +++++ +R   +       L + I  + +E    + +
Sbjct: 592 ETRLDKIPYMLVVGQQEEADKAVSVRSRFAGDEGVKPLGEFIEQICREIRTKEIR 646


>gi|291295577|ref|YP_003506975.1| threonyl-tRNA synthetase [Meiothermus ruber DSM 1279]
 gi|290470536|gb|ADD27955.1| threonyl-tRNA synthetase [Meiothermus ruber DSM 1279]
          Length = 652

 Score =  566 bits (1458), Expect = e-159,   Method: Composition-based stats.
 Identities = 246/657 (37%), Positives = 388/657 (59%), Gaps = 31/657 (4%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           +    PDG        AT +D A++I   LAK A+   +NG++ DL  P+     + I+T
Sbjct: 1   MNAVLPDGRNLELKPGATAADAAQAIGPGLAKAAIGAIVNGELYDLLKPLPPHAELRILT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPE-------VQVAIGPIIEDGFYYDFDKEQPFSS 116
            +DP    + RH+ AH+MA+AV+ ++ E       V++AIGP+IE+GFYYD D  +P   
Sbjct: 61  EKDPEYAQLFRHTLAHVMAQAVRELYTERGYRPEEVKLAIGPVIENGFYYDMDAPEPIRE 120

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
           ++L  IE+KM+ I+A + P  +  L  E+A + +    + YK E+++ +P  E ++ Y Q
Sbjct: 121 EDLPIIEEKMRRIVAANLPLKRFVLPREEALKRYAGI-DPYKTELIQDLPESEELSFYAQ 179

Query: 177 GE----WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELT 232
           G+    + DLCRGPHV STG++   FKL  +AGAYWRGDS+RPML RIYG A+ T++EL 
Sbjct: 180 GDDTYGFTDLCRGPHVPSTGRIPPHFKLTGIAGAYWRGDSSRPMLQRIYGVAFRTKEELE 239

Query: 233 QYLYFLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDD 290
            YL+  EE+++RDHR+L + ++LF I+E+   G+  W  +G  I + +  YM +++ +  
Sbjct: 240 HYLWQQEEAKRRDHRRLGQALELFTISEEVGKGLPLWLPRGAFIRRQMEDYMYQKEQEHG 299

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH 350
           Y  + TP + +  L+  SGH   Y+ +M+A         +   + LKPMNCP H  ++  
Sbjct: 300 YHYVYTPHIANARLYYTSGHLPYYKDDMYAPIEI-----EGEEYYLKPMNCPHHHMIYKA 354

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
             KSYR+LP+RLAEFG+VYR E SG+L GL R RGFTQ+DAH++C++ Q+  E +++  L
Sbjct: 355 RPKSYRDLPLRLAEFGTVYRFELSGTLSGLTRARGFTQNDAHIYCSRAQVTEEFIRVIQL 414

Query: 411 IISIYKDFGFEKIMVKLS----TRPEKRVGSD-ALWDDAENIMKGVLDTIKNSSQDRINT 465
              +YKDFG      +LS        ++ G +   W D+   ++  L+       + I  
Sbjct: 415 FDEVYKDFGISDYWFRLSLPDFENNPEKFGEENDNWRDSIKAIRAALEETGAKYVEGI-- 472

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
               GE  FYGPK +  ++  +G++    T Q+DF +P RF   + N   EK  PV+IHR
Sbjct: 473 ----GEATFYGPKLDVQIRSVLGKEETIATNQLDFIVPERFGLEFTNEKGEKETPVVIHR 528

Query: 526 AVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD 585
           A+ GS +RF    +E+  G+ PLWLSPIQA++  I    +EYAQ++A  ++ + L +E D
Sbjct: 529 AIMGSFDRFFAFYLEHTAGDFPLWLSPIQAVIVPIADRHLEYAQKVAAEMRKNRLRVEID 588

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            R+E +N KIR+  ++KIP+I++ GDKEA   ++ +R       + +++   I  + 
Sbjct: 589 DRSERMNAKIRDAELQKIPLILVVGDKEAEAGTVNVRERHVKEQRTLAVAALIEEMK 645


>gi|256391426|ref|YP_003112990.1| threonyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
 gi|256357652|gb|ACU71149.1| threonyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
          Length = 666

 Score =  566 bits (1458), Expect = e-159,   Method: Composition-based stats.
 Identities = 252/674 (37%), Positives = 382/674 (56%), Gaps = 48/674 (7%)

Query: 3   SDIKLTFPDG---SIKNFPVHATGSDVAESISRSLAKKAVAVAING----KVCDLSDPVR 55
           SD  +T  DG     +   V  T +D+         +  VA  +      ++ DL+   +
Sbjct: 2   SDFAVTIADGPDRDERTVTVGTTLADLFAG-----NRSVVAARLTDPTGTRLVDLATLAK 56

Query: 56  EGSI-EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPF 114
            G + E +  +     A+IRHS AH++A+AVQ  +P+ ++ IGP I +GFYYDFD E+PF
Sbjct: 57  AGDVVEPVAADSEDGRAIIRHSTAHVLAQAVQQAFPDAKLGIGPPIRNGFYYDFDVEKPF 116

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL------ESIPAK 168
           + ++L  +E +MQ II +   F ++ ++ E ARE  E   E YK+E++       S  A 
Sbjct: 117 TPEDLKALESRMQTIIKQGQLFSRRAVTDEDARE--ELAAEPYKLELIGLKGKASSDDAG 174

Query: 169 ENV---------TLYRQGE-------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDS 212
           E V         T+Y   +       W DLCRGPHV ST  +  F KLM+ A AYWRG  
Sbjct: 175 EGVDVEVGAGELTIYDNLDAKSGDLCWKDLCRGPHVPSTRFIPAF-KLMRSAAAYWRGSE 233

Query: 213 NRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRK 271
             P L RIYGTAW T+  L  +L FL E+EKRDHRK+  E+DLF   ++ GSG+  +H K
Sbjct: 234 KNPQLQRIYGTAWETRDALKAHLEFLAEAEKRDHRKIGAELDLFSFPDELGSGLPVFHPK 293

Query: 272 GWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G  I + +  Y R R  +  YE +NTP +   +L++ SGH D Y+  MF     D+    
Sbjct: 294 GGTIRRVMEDYSRKRHEEAGYEFVNTPHITKGNLYEISGHLDWYKDGMFPPMVLDEGHG- 352

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
            + + LKPMNCP H  ++    KSYR+LP+RL EFG+VYR E SG +HGL RVRG TQDD
Sbjct: 353 KQEYYLKPMNCPMHNLIYRARGKSYRDLPLRLFEFGTVYRYEKSGVVHGLTRVRGLTQDD 412

Query: 391 AHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMK 449
           AH++CT+EQM +E + +   ++ + +D+G     ++LST+  +  VG+D  W+ A + ++
Sbjct: 413 AHIYCTREQMRDELVSLLRFVLDLLRDYGLNDFYLELSTKDPEKYVGTDEEWELATDTLR 472

Query: 450 GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAF 509
            V +       + +   +  G  AFYGPK     +DAIGR WQ  TIQ+DF LP RF+  
Sbjct: 473 EVAE------GEDLELVMDPGGAAFYGPKISVQARDAIGRTWQMSTIQLDFQLPQRFDLE 526

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQ 569
           Y  +   +  P+MIHRA+FGSIERF G++ E++ G  P WL+P+Q +   IT + V Y +
Sbjct: 527 YQAADGSRQRPIMIHRALFGSIERFFGVLTEHYAGAFPAWLAPVQVVGIPITDAHVPYLE 586

Query: 570 EIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
            +A+ L++  + +E D  ++ +  KIR    +K+P +++ GD + ++ ++  R       
Sbjct: 587 LVASKLRAEGVRVEIDSSDDRMQKKIRNAQKQKVPYMLLAGDDDVAKAAVSFRYRSGEQN 646

Query: 630 QKVSLLDAIPILTK 643
             V + +A+  + K
Sbjct: 647 NGVPVDEAVAEIVK 660


>gi|290889941|ref|ZP_06553027.1| hypothetical protein AWRIB429_0417 [Oenococcus oeni AWRIB429]
 gi|290480383|gb|EFD89021.1| hypothetical protein AWRIB429_0417 [Oenococcus oeni AWRIB429]
          Length = 663

 Score =  566 bits (1458), Expect = e-159,   Method: Composition-based stats.
 Identities = 230/659 (34%), Positives = 369/659 (55%), Gaps = 28/659 (4%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           M   IK+T PD + K    +    ++AESIS SLAKK+V   I+     +++ +R  G  
Sbjct: 1   MADLIKITMPDDTEKEVEQNTKPIEIAESISPSLAKKSVVAKIDDHFVGMNEGIRFSGKF 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK----EQPFS 115
            ++T  +  +L V+RHS  H++A+A++ + P++   +G  I +GFYYD D     E+  +
Sbjct: 61  RLVTKGEDEALKVLRHSTTHLLAQALRRLHPKIHFGVGVAIANGFYYDTDDSDESEKQVA 120

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           +DE  +IE +M++++  + P   Q +S ++A ++F    + YK+ ++   PA + +T+ +
Sbjct: 121 ADEFPKIEAEMKKLVQANIPIQHQIVSRKEALKIFAE--DPYKIALINDFPADQEITIVK 178

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
           QG++ DL RG  V STG +K F     VAGAYWRG S+  M+ RIYG +    + L    
Sbjct: 179 QGDYTDLDRGGLVPSTGWIKHFALT-SVAGAYWRGMSDNQMMQRIYGLSEWNPENLEAQK 237

Query: 236 YFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEE 293
             LEE ++RDHR + ++M+LF    + G+G+  W   G  I +T+  Y + ++ ++ Y  
Sbjct: 238 KALEERKERDHRTIGKQMELFFTNPEIGAGLPVWLPNGAAIRRTIEDYLVEKERQNSYMN 297

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           + TP V +  L+++SGHWD YR +MF    AD    D     L+PMNCP H+ +F H  +
Sbjct: 298 VYTPVVSNLDLYKRSGHWDHYRDDMFPAMTAD----DGEQLELRPMNCPSHIEIFEHEPR 353

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYR+LP R+AEFG ++R E SG+L GL RVR  T +D H     EQ+  E   I  LI  
Sbjct: 354 SYRDLPYRIAEFGQMHRWEKSGALTGLSRVREMTLNDGHTVVAPEQVEPEFKGILQLIRD 413

Query: 414 IYKDFGFEKIMVKL------STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGV 467
           +Y DFGF     +           +K    DA+W+ A+  +K  +D +       ++   
Sbjct: 414 VYHDFGFTDQDYRFRLSYRDPKNTKKYYDDDAMWEHAQAALKRAMDDMG------LDYFE 467

Query: 468 LLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAV 527
             GE AFYGPK +   K A+G +    TIQ+DF LP RF+  Y     +   PV+IHR V
Sbjct: 468 AEGEAAFYGPKLDIQFKTALGNEETMSTIQLDFLLPERFDMKYTGEDGKDHRPVLIHRGV 527

Query: 528 FGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITS-SAVEYAQEIANLLKSHHLSIETDF 586
            G++ERF+  +IE +KG  P WL+P+QA+V  +   +  +YA+ I + L      I+ D 
Sbjct: 528 VGTMERFVAFLIEKYKGQFPTWLAPVQAVVIPVNYGAHGDYARNIYSKLMKDGRRIKLDN 587

Query: 587 RNETINYKIREHSIK-KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R+E + Y IR+  +  K P I++ GD+E  + S+ +R  GS  T+++ + +   ++  +
Sbjct: 588 RDEKLGYLIRDAQVNLKTPYILVVGDQELRDNSVTVRFRGSDQTKEMKIDEFEEMINDD 646


>gi|224283116|ref|ZP_03646438.1| threonyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171]
 gi|313140266|ref|ZP_07802459.1| threonyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171]
 gi|313132776|gb|EFR50393.1| threonyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171]
          Length = 676

 Score =  565 bits (1457), Expect = e-159,   Method: Composition-based stats.
 Identities = 242/667 (36%), Positives = 366/667 (54%), Gaps = 43/667 (6%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           S I +T  +G  K      TG ++         K  +AV +NG++ DL  P+ +G ++E 
Sbjct: 4   SSISITV-NGEAKEVEATTTGVELFAD-----DKDIIAVRLNGELRDLCTPLSDGDAVEP 57

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +  +    L ++RHS  H+MA+AVQ ++P V++ +GPII+DGFYYDF  ++PF+ D+L  
Sbjct: 58  VAIDSEDGLGIMRHSATHVMAQAVQELFPNVKLGVGPIIKDGFYYDFQVDEPFTPDDLKA 117

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPA-----------KEN 170
           IEK MQ I+     F ++ ++ E+A +  E   + +K+E++E   A            + 
Sbjct: 118 IEKHMQRIVKSAQSFRRRVVTEEEALK--EETDQPFKIELIEDKEAHLDPSTATEVSGKE 175

Query: 171 VTLYRQGE------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTA 224
           ++ Y   +      W DLCRGPH+ +T  +K F K+ + A AYWRG    P + RIYGTA
Sbjct: 176 LSFYDNVDRDGNTVWKDLCRGPHLPNTRFIKAF-KIERSAAAYWRGSEKNPTMQRIYGTA 234

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM 283
           W T+++L  Y   LEE+ KRDHRKL  EMDLF   E+ G G+  +H KG  +   +  Y 
Sbjct: 235 WATKEDLKAYQTRLEEAAKRDHRKLGAEMDLFSFPEEIGPGLAVFHPKGAAVINAMEDYS 294

Query: 284 RR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT-------IKDLRTFA 335
           R    K  Y  + TP +    L++ SGH   Y+  M+     D+         K    + 
Sbjct: 295 REMHRKHHYSFVQTPHITKGGLYETSGHLHWYKDGMYPPMHLDEEYDADGNITKPGADYY 354

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC 395
           LKPMNCP H  +F    +SYRELP+RL EFG+VYR E SG +HGL RVRG TQDD+H++C
Sbjct: 355 LKPMNCPMHNLIFKSRQRSYRELPLRLFEFGTVYRYEKSGEVHGLTRVRGLTQDDSHIYC 414

Query: 396 TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDT 454
           T+EQM +E   +   ++++ KDFG     ++LST+     VGSD +W++A   ++ V + 
Sbjct: 415 TREQMKDELTSLLTFVLNLLKDFGLSDFYLELSTKDPDKYVGSDEIWEEATRTLREVAEA 474

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH 514
                   ++     G  AFYGPK     +DAIGR WQ  TIQ+DFNLP RF   Y+   
Sbjct: 475 ------SHLDLVADPGGAAFYGPKISVQARDAIGRTWQVSTIQLDFNLPERFQLEYIAKD 528

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANL 574
                PVMIHRA+FGSIERF  +++E++ G  P WL+P+Q +   +      +       
Sbjct: 529 GTHQRPVMIHRALFGSIERFFAVLLEHYAGAFPAWLAPVQVLGVPVADEFAPHLAGFVKS 588

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           L+   +  E D+ ++    KIR  S  K+P I+I G+++ +  ++  R    +    V +
Sbjct: 589 LEDEMVRCEIDYSDDRFGKKIRNASKSKVPFILIVGEEDMNNNAVSFRFRDGSRLNGVPV 648

Query: 635 LDAIPIL 641
            +A   +
Sbjct: 649 DEAREKI 655


>gi|218190922|gb|EEC73349.1| hypothetical protein OsI_07557 [Oryza sativa Indica Group]
          Length = 674

 Score =  565 bits (1457), Expect = e-159,   Method: Composition-based stats.
 Identities = 264/592 (44%), Positives = 376/592 (63%), Gaps = 18/592 (3%)

Query: 55  REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPF 114
            E  + + T E    L  IRH+CAH+MA AVQ ++P  +V IGP I++GFYYDFD E P 
Sbjct: 87  EEERVVLPTNESSDRLLRIRHTCAHVMAMAVQKLFPNSKVTIGPWIDNGFYYDFDME-PL 145

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
           +  +L +I+K+M  II ++ P +++ +S E+A++  E+  E YK+EILE I   E +T+Y
Sbjct: 146 TDKDLKRIKKEMDRIIRKNLPLVREEVSREEAQKRIEALNEPYKLEILEGIKE-EPITIY 204

Query: 175 RQGE-WFDLCRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELT 232
             GE W+DLC GPHV STG++ ++  +L  VAGAYWRGD +  ML RIYGTAW T+ +L 
Sbjct: 205 HIGEEWWDLCAGPHVESTGKIDRRAVELESVAGAYWRGDESNQMLQRIYGTAWETEDQLK 264

Query: 233 QYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDD 290
            Y++F EE+++RDHR+L  ++DLF I ED G G++FWH KG  I   L    ++  ++  
Sbjct: 265 AYIHFKEEAKRRDHRRLGLDLDLFSIQEDAGGGLVFWHPKGAIIRHVLEDSWKQIHLQRG 324

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH 350
           Y+ + TP V    LW+ SGH D Y+ NM+     +D +     + L+PMNCP H+ V+  
Sbjct: 325 YDLLYTPHVAKAELWKVSGHIDFYKENMYNQMDVEDEL-----YQLRPMNCPYHILVYKR 379

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
            L SYR+ P+R+AE G+VYR E SGSLHGL RVRGFTQDDAH+FC ++Q+ +E   + +L
Sbjct: 380 KLHSYRDFPIRVAELGTVYRYELSGSLHGLFRVRGFTQDDAHIFCLEDQIKDEIRGVLDL 439

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
              I   FGF    + LSTRPEK VGSD +W+ A   +K  L+             V  G
Sbjct: 440 TEQILGQFGFRYYEINLSTRPEKSVGSDDIWEKATLALKDALED------KGWEYKVDEG 493

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
            GAFYGPK +  ++DA+GR WQC T+QVDFNLP RF+  YVNS+SEK  P+MIHRA+ GS
Sbjct: 494 GGAFYGPKIDLKIEDALGRKWQCSTVQVDFNLPERFDITYVNSNSEKKRPIMIHRAILGS 553

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
           +ERF G++IE++ G+ PLWL+PIQA +  +T + ++Y  E+A+ LKS  +  E     E 
Sbjct: 554 LERFFGVLIEHYAGDFPLWLAPIQARILPVTDNELQYCNEVASELKSKGIRAEV-CHGER 612

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +   IR    KK+P++ + G KE   R++ IR   S     + + +    + 
Sbjct: 613 LPKLIRNAETKKVPLMAVVGPKEVQARTLTIRSRHSGEIGTMPVDEFFRRMQ 664


>gi|312218414|emb|CBX98360.1| similar to threonyl-tRNA synthetase [Leptosphaeria maculans]
          Length = 784

 Score =  565 bits (1457), Expect = e-159,   Method: Composition-based stats.
 Identities = 241/708 (34%), Positives = 362/708 (51%), Gaps = 80/708 (11%)

Query: 3   SDIKLTFPDGSIKNF-PVHATGSDVAESISRSLAKKAVAVAIN-----GKVCDLSDPVRE 56
            DI +T  DG I        + +++A +IS+SL ++ V   ++       + DL  P+ +
Sbjct: 79  EDISITLEDGKIIQGKSWETSPAEIARNISKSLFERTVVARLDKGTPEETLWDLERPLEK 138

Query: 57  -GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFS 115
              +E++  + P    V  HS AHI+ EA +  +    + IGP IEDGFYY+       +
Sbjct: 139 SCKLELLPFDHPEGKKVFWHSSAHILGEASERRY-GCDLCIGPPIEDGFYYEMALPDGAA 197

Query: 116 SD--ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES-IPAKENVT 172
            +  +   +E  +  I+     F +  LS     E+F+S    YK  I++  IP     T
Sbjct: 198 VEQSDHKPLETIVNSIVKEKQVFQRLTLSKHDLLEMFKS--NKYKQHIIKDKIPDGTFTT 255

Query: 173 LYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELT 232
           +YR G   DLCRGPHV  TG++K+F K+MK + +Y+ GD+    L RIYG ++  +  + 
Sbjct: 256 VYRNGPLIDLCRGPHVPHTGRIKQF-KIMKNSASYFLGDAANDSLQRIYGVSFPDKDAMQ 314

Query: 233 QYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDY 291
            +L FLEE+ KRDHRK+ ++ +LF   E   G  F+   G  I+ TL +++R +     Y
Sbjct: 315 AHLKFLEEAAKRDHRKIGKDQELFFFHEFSPGSCFFLPHGQIIYNTLQAFLREEYWNRGY 374

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           +E+ +P + +  LW+ SGHW  Y  +MF          +   +ALKPMNCPGH  +F H 
Sbjct: 375 QEVGSPNMYNSALWKISGHWQHYADDMFTFDV------EKEKWALKPMNCPGHCLIFKHR 428

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI 411
            +SYRELP+R+A+FG ++RNE SG+L GL RVR F QDD HVFCT++Q+  E L + + +
Sbjct: 429 ERSYRELPIRMADFGILHRNEASGALTGLTRVRRFQQDDTHVFCTQDQINEEILALFDFL 488

Query: 412 ISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
            ++Y  FGF   + KLSTRPE  +G    W+ AE  +   LD             +  G+
Sbjct: 489 KAVYGKFGFTFKL-KLSTRPEGFLGDIDTWNQAEAKLTQALDEFTAGGGGA--WELNPGD 545

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK-------------- 517
           GAFYGPK +  + DA+ R++QC TIQ+DF LP++F   Y+ S                  
Sbjct: 546 GAFYGPKIDITISDALKREFQCATIQLDFQLPNQFELEYMTSEGAATKPKEEKVKAEQQK 605

Query: 518 --------------------------------------CHPVMIHRAVFGSIERFIGIMI 539
                                                   PVMIHRA++GS ERFI I+ 
Sbjct: 606 VEKKAEQPKEKDHIDQKKDNLGGQVAIPKEIRPPQPGYARPVMIHRAIYGSFERFIAILT 665

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E+F G  P WLSP Q +V  +  SA +Y +E+   L+ HHL  + D    T+  KIR   
Sbjct: 666 EHFAGRWPFWLSPRQVMVIPVMPSANDYVKEVQAELRKHHLHADIDISGNTMQKKIRTAQ 725

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQK----VSLLDAIPILTK 643
           +     I++ G +E   R++  R      TQ+    V L +A+  L +
Sbjct: 726 LSLYNFIMVVGAEEQKARAVNWRNRDDQETQQRGEIVPLDEAVKKLVQ 773


>gi|124516423|gb|EAY57931.1| Threonyl-tRNA synthetase [Leptospirillum rubarum]
          Length = 617

 Score =  565 bits (1457), Expect = e-159,   Method: Composition-based stats.
 Identities = 258/602 (42%), Positives = 367/602 (60%), Gaps = 16/602 (2%)

Query: 53  PVREGSI--EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK 110
           P+ EG +  + +T ++  SL  +RHS AH +A+AV+ ++P  QV +GP  E+GFYYDF  
Sbjct: 21  PLTEGQMGPKSMTEKESESLRALRHSAAHTLAQAVKKLYPSAQVGVGPATEEGFYYDFRY 80

Query: 111 EQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN 170
           E+PF+ ++L +IE +M+ +I    P +++ +S  +A +LF  + E +K+E+++ IP    
Sbjct: 81  ERPFTPEDLERIENEMKSLIRSSLPIVRKPVSRGEAEKLFRERNEPFKLELIQGIPEDAE 140

Query: 171 VTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQE 230
           +T+Y QGE+ DLCRGPHV STG++     L   + AYW+G  + P L RIYGTA+++++E
Sbjct: 141 ITVYEQGEFVDLCRGPHVSSTGEIPAVRLL-STSSAYWKGVESNPSLQRIYGTAFHSEKE 199

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMR-RKIK 288
           L +YL   EE ++RDHRKL RE+ LF   ++   G++ W  +G +I +TL    +    +
Sbjct: 200 LEEYLRQQEEIQRRDHRKLGRELGLFRTLDEKGAGLVLWLPRGSQIRRTLEELWKILHDR 259

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
             Y  + TP +    LW QSGHWD Y+ +MF     + T      + LKPMNCP H+ +F
Sbjct: 260 HGYRYVYTPHIARLDLWMQSGHWDYYQDSMFRPMETEGTA-----YELKPMNCPFHILIF 314

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
              ++SYR+LP+RL+E G+VYR E SG+LHGLMRVRGFTQDDAH+F   E +  E   + 
Sbjct: 315 RESVQSYRDLPIRLSELGTVYRYERSGTLHGLMRVRGFTQDDAHIFYPPEDLAGEIRNVL 374

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
            L+  +   FGF    V LSTRPEK VGSD  W+ A   ++  L+      +  I   V 
Sbjct: 375 ALVDQMIGRFGFTDRTVYLSTRPEKSVGSDENWEMATGSLRRALE------ESGIPYEVD 428

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
            GEG FYGPK +    DAIGR WQ  TIQVDFNLP +F+  Y N   E C P+MIHRA+F
Sbjct: 429 PGEGVFYGPKIDIKFHDAIGRAWQLSTIQVDFNLPEKFDLTYRNDSGEPCRPIMIHRALF 488

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRN 588
           GSIERF GI+IE++ G  PLWL+P Q  + TI    + YAQ + N LK   +  E DFRN
Sbjct: 489 GSIERFFGILIEHYAGAFPLWLAPEQVRIMTIADRHIPYAQTVLNRLKDRGVRAEGDFRN 548

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
           E I +K+RE  + KIP + + GD+E  E  + +R           L   +  L + S PP
Sbjct: 549 EKIGFKVREAQMAKIPEMWVVGDREVEENRVSVRTREGEKKDLRPLESELEDLFRRSGPP 608

Query: 649 DC 650
           + 
Sbjct: 609 EM 610


>gi|294886613|ref|XP_002771785.1| threonyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
 gi|239875547|gb|EER03601.1| threonyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
          Length = 820

 Score =  565 bits (1457), Expect = e-159,   Method: Composition-based stats.
 Identities = 238/712 (33%), Positives = 368/712 (51%), Gaps = 84/712 (11%)

Query: 1   MPSD-IKLTFPDGSIKNFPV-HATGSDVAESISRSLAKKAVAVAI---------NGKVCD 49
           +P D I +  PDG+ K       T  D+A  IS+ LA   VA  I         +  V D
Sbjct: 77  LPKDPITIVLPDGTQKEGRKFETTPLDIAIGISKGLANSVVAAKILYTEPVDSMDQTVWD 136

Query: 50  LSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD- 107
           LS P+     +E++  + P       HS AHI+ EA++  +    + IGP +E+GFYYD 
Sbjct: 137 LSRPLEGSCKLELLKFDSPEGKDTFWHSSAHILGEAMEQEY-GCYLTIGPPLENGFYYDG 195

Query: 108 FDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE-SIP 166
           F        ++  +IEK++  I+  D  F +  ++ E+A ELF      +K++++   +P
Sbjct: 196 FFGNLKLGPNDYEKIEKRIDSIVKSDQKFQRLVVTKEEALELFAY--NPFKLQLISTKVP 253

Query: 167 AKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWN 226
                ++YR G   DLCRGPH+  TG  K F+   K + AYW G +    L R+Y  ++ 
Sbjct: 254 DGSLTSVYRIGSLVDLCRGPHLPRTGIAKAFWVN-KNSQAYWLGKAENDSLQRVYAISFP 312

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSG-VIFWHRKGWKIFQTLISYMRR 285
           T++ L +Y   +EE+ KRDHR + ++ DLF      S    FW   G  I+  L+ ++RR
Sbjct: 313 TEKMLKEYKRNVEEAMKRDHRLIGKKQDLFFFHPTMSPGSCFWTSHGAVIYNKLVDFIRR 372

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           + +   ++E+ TP +  + L+QQSGH  +Y+ NM+++    +T      + LKPMNCPGH
Sbjct: 373 EYRLRGFDEVITPNIFSEALFQQSGHCGNYKDNMYSMNIEGET------WFLKPMNCPGH 426

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +F+  ++SY+ELP+R+A+FG ++RNE SG+L GL RVR F QDDAH+FC  +Q+ +E 
Sbjct: 427 CMIFDQKVRSYKELPIRMADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCRPDQVQDEI 486

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
           +     +  +Y  FGF+  +  LSTRP+K +GS A+WD AE+ +K  L+         I+
Sbjct: 487 VHALEFLKFVYNTFGFDFSVC-LSTRPKKAIGSRAIWDTAESGLKNALEACG------ID 539

Query: 465 TGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK------- 517
             +  G+GAFYGPK +  L+DA+ R  QCGTIQ+DFNLP RFN  Y  + +E+       
Sbjct: 540 YDLNPGDGAFYGPKIDIRLRDALNRYHQCGTIQLDFNLPIRFNLQYRIAETEESGDAHAA 599

Query: 518 -------------------------------------------CHPVMIHRAVFGSIERF 534
                                                        PVMIHRA+ GSIER 
Sbjct: 600 SEAANSPVDEQQKGSTQSSAAVENVGSKAKADEITLGELKHGFERPVMIHRAILGSIERC 659

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             I+ E+F G  P WLSP Q +V  ++    +YA  +   L       + D    T+N K
Sbjct: 660 TAILTEHFGGKWPFWLSPRQVMVVPVSDKYSDYADYVRKQLVRLGYEADADLSTRTMNKK 719

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGS-TTTQKVSLLDAIPILTKES 645
           +RE  +     I + G+KE ++ ++ +R+  +        + +   +  KES
Sbjct: 720 VREAQVAAFNYIAVVGEKEQNDLTVTLRKRDTARPLGTFGIREMFDMFEKES 771


>gi|325679048|ref|ZP_08158642.1| threonine--tRNA ligase [Ruminococcus albus 8]
 gi|324109172|gb|EGC03394.1| threonine--tRNA ligase [Ruminococcus albus 8]
          Length = 648

 Score =  565 bits (1456), Expect = e-159,   Method: Composition-based stats.
 Identities = 216/651 (33%), Positives = 348/651 (53%), Gaps = 19/651 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IKLT  DGS+K        S++ + I   L K A  V ING+V DL   +  +   E++
Sbjct: 1   MIKLTLKDGSVKEIEQAMPASEIIKGIGMGLYKAACVVKINGEVKDLRTVIDSDCEFEVL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +  +      H+ +H+MA+AV++++P+ ++  GP  E+GFYYDF  E+PF+  +L +I
Sbjct: 61  TFDSKQGKETFWHTASHLMAQAVKNLYPDAKLGRGPATENGFYYDFQVEKPFAPADLEKI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES-IPAKENVTLYRQGEWFD 181
           + +M+ +        +  LSH++A +L + K E +K+E++E      E ++ YRQG++ D
Sbjct: 121 QAEMKRLAKEGYELERFELSHDEAVKLMQEKNEDFKLELIEKHDSKGEKLSFYRQGDFVD 180

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LC GPH+ S   +K   KL +  GAYW    +   +SRIYGTA+     L ++L  +EE+
Sbjct: 181 LCAGPHIMSVAPIK-AVKLTQCTGAYWGKVEDGIQMSRIYGTAYPKASMLEEHLKQMEEA 239

Query: 242 EKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQV 299
           + RDH KL RE+D F      G G+     KG K+ QTL  ++   + +  Y+   TP +
Sbjct: 240 KLRDHNKLGRELDYFTTVDYIGQGLPILLPKGAKVIQTLQRWIEDEEYRRGYQLTKTPFM 299

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             + L++ SGHWD YR  MF +   DD  K+   FAL+PM CP    VF +  +SYR+LP
Sbjct: 300 SKRELYKISGHWDHYRDGMFILGDPDDETKE--CFALRPMTCPFQYQVFLNRKRSYRDLP 357

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +RL E  +++R E SG +HGL+RVR FT  + H+    EQ+ +E      L     +  G
Sbjct: 358 MRLGETSTLFRKEDSGEMHGLIRVRQFTISEGHLIIRPEQLEDEFKGCLALAKYCLETIG 417

Query: 420 FEKI------MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
             +           +    K  G+   W++A+  MK +LD I       ++  + + E A
Sbjct: 418 LAEDVSYRFSQWDPANPNNKYEGTAEQWEEAQGAMKKILDDIG------LDYEIGIDEAA 471

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  +K+  G++    TIQ+D  +  +F   YV+   +   P +IHR   G  ER
Sbjct: 472 FYGPKLDIQIKNVFGKEDTLITIQIDMQIAKKFGMEYVDKDGKMKMPYIIHRTSVGCYER 531

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
            + ++IE + G LPLWL+P Q  +  I     +YA E+A  ++   + +E D  ++ I  
Sbjct: 532 TLALLIEKYAGVLPLWLAPEQVRILPIKPEHNDYAYELAEEMRDLGMRVEVDGEDDNIGP 591

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KI++    ++P + I GD E  +R++ +R         + + DAI  L +E
Sbjct: 592 KIKQARFDRVPYMFIIGDNEVKDRTVTVRSRKEGELPAMPVADAIAKLKEE 642


>gi|308177541|ref|YP_003916947.1| threonine--tRNA ligase [Arthrobacter arilaitensis Re117]
 gi|307745004|emb|CBT75976.1| threonine--tRNA ligase [Arthrobacter arilaitensis Re117]
          Length = 671

 Score =  565 bits (1456), Expect = e-159,   Method: Composition-based stats.
 Identities = 249/677 (36%), Positives = 370/677 (54%), Gaps = 49/677 (7%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSD-VAESISRSLAKKAVAVAINGKVCDLSDPVREGS- 58
           M   + LT  DG         TG    A        K  V + ++G + DL+  +  G+ 
Sbjct: 1   MSEQLTLTI-DGEQVQVDAGTTGLQHFAND------KDVVVMHVDGVLRDLARELEAGTT 53

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           +  +T  DP  L V+RHS AH+MA+AVQ + P+ ++ IGP I DGFY+DFD E PF+ ++
Sbjct: 54  VTRVTITDPEGLEVLRHSTAHVMAQAVQQLRPDSKLGIGPYITDGFYFDFDVEDPFTPED 113

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-------- 170
           L Q+EK MQ+II ++  F+++ +S E+A+   E   E YK E+L    + +         
Sbjct: 114 LKQLEKMMQKIINQNQLFVRREVSPEEAKA--EMANEPYKCELLAKADSADTSGEGVTVE 171

Query: 171 -----VTLYRQGE-------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLS 218
                 T+Y   +       W DLCRGPH+ +T  +K  + L + A AYW G      L 
Sbjct: 172 VAAGETTIYDNVDRKSGETVWKDLCRGPHLPNTKLIKNAYALTRSAAAYWLGSEKNKQLQ 231

Query: 219 RIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQ 277
           RIYGTAW T+ +L  Y   L E+E+RDHRKL  E+DLF   ++ GSG+  +H KG  I +
Sbjct: 232 RIYGTAWPTKDDLKAYQERLAEAERRDHRKLGAELDLFSFPDELGSGLPVFHPKGGIIKR 291

Query: 278 TLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT-------IK 329
            +  Y+R R +++ ++ + TP +    L+  SGH   Y   MF     D+         K
Sbjct: 292 EMEDYVRDRHVEEGFQYVGTPHISKDGLFHTSGHLPYYADTMFPALHIDEERDEDGNITK 351

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
             + + LK MNCP H  +F    +SYRELP+RL EFG VYR E SG +HGL RVRGF+QD
Sbjct: 352 QGQEYRLKAMNCPMHNLIFRGRGRSYRELPLRLFEFGHVYRYEKSGVVHGLTRVRGFSQD 411

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK---RVGSDALWDDAEN 446
           D+H + TKEQ   E   + N ++S+ +DFG +   ++LSTR  +    +GSD  W++A  
Sbjct: 412 DSHSYVTKEQAPAEVEHLLNFMLSLLRDFGMDDFYLELSTRDPESDKFIGSDEQWNEATA 471

Query: 447 IMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF 506
           +++ V      +++  +      G  AFYGPK     KDAIGR WQ GT+Q DFN P+RF
Sbjct: 472 VLERV------ATESGVELVADPGGAAFYGPKISVQAKDAIGRTWQMGTVQYDFNQPARF 525

Query: 507 NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVE 566
              Y  +   +  PVMIH A FGSIERF+G++ E++ G  P WLSP+Q     +  +  +
Sbjct: 526 GLEYQAADGTRQEPVMIHAAKFGSIERFLGVLTEHYAGAFPAWLSPVQVRAIPVAEAFND 585

Query: 567 YAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS 626
           Y  E+   LK+  + +E D  ++    KIR  S  KIP ++I G ++A   ++  R    
Sbjct: 586 YLGEVVAKLKAAGVRVELDDSSDRFPKKIRNASKDKIPFVLIAGGEDADANAVSFRFRDG 645

Query: 627 TTTQKVSLLDAIPILTK 643
           +   +V + DA+  + +
Sbjct: 646 SQENQVPVDDAVARIVE 662


>gi|86608959|ref|YP_477721.1| threonyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86557501|gb|ABD02458.1| threonyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 603

 Score =  565 bits (1456), Expect = e-159,   Method: Composition-based stats.
 Identities = 232/595 (38%), Positives = 365/595 (61%), Gaps = 14/595 (2%)

Query: 56  EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFS 115
             +++++   +   L  IRH+ +H++A AVQ ++P+ QV IGP  + GFYYDFD  +PF+
Sbjct: 12  NSTLKLLRTHESPKLERIRHTTSHVLAMAVQKLFPKAQVTIGPTTDYGFYYDFDHPEPFT 71

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            ++L +I+K+MQ II +  P +++ +S E+AR   E+  E YK+EIL+SIP  E +++Y 
Sbjct: 72  PEDLDRIKKEMQAIIKKGLPVIREEVSREEARRRIEALGEPYKLEILDSIPEGEVISIYH 131

Query: 176 QG-EWFDLCRGPHVRSTGQVKK-FFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQ 233
            G EW+DLC GPHV +T ++    F L+ VAGAYWRGD  +P L RIYGTAW T +EL +
Sbjct: 132 LGNEWWDLCAGPHVENTQELNPKAFDLLSVAGAYWRGDETKPQLQRIYGTAWETPEELKE 191

Query: 234 YLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDY 291
           Y   LEE+++RDHRKL +E+ LF  +++ G G+  W  KG  +   L  ++ + ++K  Y
Sbjct: 192 YKRRLEEAKRRDHRKLGKELGLFLFSDEVGPGLPLWTPKGTTLRWVLEDFLKQEQLKRGY 251

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD-LRTFALKPMNCPGHVAVFNH 350
             + TP +    L++ SGHW  YR +MF +   ++  +   + F +KPMNCP H+ ++  
Sbjct: 252 LPVVTPHIARVDLFKISGHWQKYREDMFPMMAENEQARAAEQGFVMKPMNCPFHIQIYKS 311

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
            L+SYR+LP+R AEFG+VYR E SG L GL RVRGFT DDAH+F   +Q+  E LK+ +L
Sbjct: 312 ELRSYRDLPLRYAEFGTVYRYEQSGELGGLTRVRGFTVDDAHLFVRPDQLEEEFLKVVDL 371

Query: 411 IISIYKDFGFEKIMVKLSTRPEK---RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGV 467
           I+ ++     +    +LS R  K    +GS   WD AEN ++  ++ +     + I    
Sbjct: 372 ILVVFDKLKLKDFRARLSFRDPKSDKYLGSPEDWDRAENAIRRAVEKLSMPHFEGI---- 427

Query: 468 LLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAV 527
             GE AFYGPK ++I +DA+ R+WQ GT+QVD+  P RF+  YV     +  PVMIHRA 
Sbjct: 428 --GEAAFYGPKLDFIFRDALDREWQLGTVQVDYQNPQRFDLQYVAEDGSRQRPVMIHRAP 485

Query: 528 FGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR 587
           FGS+ER IGI+IE + G+ P WL+P Q  +  ++   + YA ++ + L+   + +  D  
Sbjct: 486 FGSLERLIGILIEEYAGDFPFWLAPEQVRILPVSDQYLGYATQVRDQLREQGIRVHIDAD 545

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           ++ +  KIR     +IP ++I G++E +  ++ +R+        +++ D +  + 
Sbjct: 546 SDRLPKKIRNAEKARIPFMLIVGEQEQAAGTVSVRQRHGQELGSLTVADFLDQVQ 600


>gi|309776920|ref|ZP_07671890.1| threonine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
 gi|308915331|gb|EFP61101.1| threonine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
          Length = 580

 Score =  565 bits (1456), Expect = e-159,   Method: Composition-based stats.
 Identities = 235/586 (40%), Positives = 368/586 (62%), Gaps = 19/586 (3%)

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDE 118
           ++I  ++   L+ + HSCAH+MA+AV+ ++P+ +  +GP+I +GFYYD D  ++    ++
Sbjct: 2   KMIDIKEHEELSKLNHSCAHMMAQAVKRLYPQAKFWVGPVISEGFYYDIDLGDEVIKEED 61

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           LA+IEK+M++I       +++ +S ++A E+F+   + YK++++  + A   +T Y+QGE
Sbjct: 62  LAKIEKEMKKIAKDGKRIVRKEISKDEAMEMFK--DDPYKMDLIRDL-ADGTITCYQQGE 118

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + DLCRGPHV +  Q+K F KL+K +GAYW+GD++  ML RIYG  + T +EL ++L+ L
Sbjct: 119 FIDLCRGPHVDTVKQLKNF-KLLKHSGAYWKGDASNKMLQRIYGICFPTAEELEEHLHLL 177

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
           EE++KRDH+KL RE+ LF ++E   G+ F+   G  I   L ++   +  K++Y+ I TP
Sbjct: 178 EEAKKRDHKKLGRELGLFMMSEYAPGMPFFLPNGMIIRNLLENFWYEEHTKENYQFIKTP 237

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++ + LW+ SGHW++Y+ NM+          D R FA+KPMNCPG + VF +GL SY++
Sbjct: 238 IMMSKELWEVSGHWENYKENMYTTMV------DDREFAIKPMNCPGSLLVFKNGLHSYKD 291

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+ E G V+R+E SG+L+GL RVR FTQDDAH+F   +Q+  E +++   I  +Y  
Sbjct: 292 LPLRMGELGQVHRHEASGALNGLFRVRTFTQDDAHIFMRPDQIEGEVMRLIQFIDRVYSV 351

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FG    +   +   +K +G  A+W+ +E  +                  V  G+GAFYGP
Sbjct: 352 FGLSYRIELSTRPEKKYIGDLAIWEQSEKALADACVHAGK------EYKVNPGDGAFYGP 405

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K ++ +KD++GR+WQCGTIQ+D NLP RF+  YV     K  PVM+HR +FGSIERFIGI
Sbjct: 406 KLDFHIKDSLGREWQCGTIQLDMNLPERFDLTYVEKDGSKVRPVMLHRVIFGSIERFIGI 465

Query: 538 MIENFKGNLPLWLSPIQAIVTTI-TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +IE+F G+ P+WL+P Q  V  +     +EYA E+   L +     + D RNE + Y+IR
Sbjct: 466 LIEHFAGHFPVWLAPQQVSVVPVHHEKHLEYANEVNEKLLALGYRSKLDARNEKLGYRIR 525

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           E  + KIP  ++ GD E    S+ +RR  S  +  + L D I ++ 
Sbjct: 526 EAQLSKIPYQLVIGDGEIENGSVTLRRAQSKKSLTMPLEDFIAMMN 571


>gi|332844839|ref|XP_003314929.1| PREDICTED: probable threonyl-tRNA synthetase 2, cytoplasmic isoform
           3 [Pan troglodytes]
          Length = 766

 Score =  565 bits (1456), Expect = e-159,   Method: Composition-based stats.
 Identities = 232/612 (37%), Positives = 341/612 (55%), Gaps = 23/612 (3%)

Query: 2   PSDIKLTFPDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
            + I +   DG          T   VA  IS+ LA+  V   +NG++ DL  P+  + S+
Sbjct: 159 SNIITVRVADGQTVQGEVWKTTPYQVAAEISQELAESTVIAKVNGELWDLDRPLEGDSSL 218

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDE 118
           E++T ++  + AV  HS AHI+ EA++  +    +  G  IE+GFYYD F +++  SS E
Sbjct: 219 ELLTFDNEEAQAVYWHSSAHILGEAMELYYGGH-LCYGLPIENGFYYDVFIEDRAVSSTE 277

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L+ +E   + II    PF +  +S E   E+F+     +K  IL         T+YR G 
Sbjct: 278 LSALENICKAIIKEKQPFERLEVSKEILLEMFKY--NKFKCRILNEKVNTATTTVYRCGP 335

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLC+GPHVR TG++K   K+ K +  YW G+     L RIYG ++   + +  +  F 
Sbjct: 336 LIDLCKGPHVRHTGKIKTI-KIFKNSSTYWEGNPEMETLQRIYGISFPDNKMMRDWEKFQ 394

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
           EE++ RDHRK+ +E +LF   +   G  F+  +G  I+ TL  ++R +    D+ E+ +P
Sbjct: 395 EEAKNRDHRKIGKEQELFFFHDLSPGSCFFLPRGAFIYNTLTDFIREEYHKRDFTEVLSP 454

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  LW+ SGHW  Y  NMF  +   DT      FALKPMNCPGH  +F H  +S+RE
Sbjct: 455 NMYNSKLWEASGHWQHYSENMFTFEIEKDT------FALKPMNCPGHCLMFAHRPRSWRE 508

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           +P+R A+FG ++RNE SG+L GL RVR F QDDAH+FCT EQ+  E       + S+Y  
Sbjct: 509 MPIRFADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCTVEQIEEEIKGCLRFLQSVYST 568

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF   +  LSTRPE  +G   +W++AE  ++  L       +      +  G+GAFYGP
Sbjct: 569 FGFSFQLN-LSTRPENFLGEIEMWNEAEKQLQNSLMDFGEPWK------MNPGDGAFYGP 621

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIG 536
           K +  +KDAIGR  QC TIQ+DF LP RFN  YV+    +K  PV+IHRA+ GS+ER I 
Sbjct: 622 KIDIKIKDAIGRYHQCATIQLDFQLPIRFNLTYVSKDGDDKKRPVIIHRAILGSVERMIA 681

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FRNETINYKI 595
           I+ EN+ G  P WLSP Q +V  +  +  +YA ++++         + D   N T+N KI
Sbjct: 682 ILSENYGGKWPFWLSPRQVMVIPVGPTCEKYALQVSSEFFEEGFMADVDLDHNCTLNKKI 741

Query: 596 REHSIKKIPIII 607
           R   + +   I+
Sbjct: 742 RNAQLAQYNFIL 753


>gi|292655832|ref|YP_003535729.1| threonyl-tRNA synthetase [Haloferax volcanii DS2]
 gi|291370664|gb|ADE02891.1| threonyl-tRNA synthetase [Haloferax volcanii DS2]
          Length = 643

 Score =  565 bits (1456), Expect = e-159,   Method: Composition-based stats.
 Identities = 241/646 (37%), Positives = 373/646 (57%), Gaps = 23/646 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEI 61
           SDI +  PDG+  +    AT  D A +I   L K  VA  ++G++ D   P+ +G+ + I
Sbjct: 2   SDIAVILPDGTELSVEEGATVRDAAFAIGPGLGKDTVAGVVDGELVDKETPLHDGADLVI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +T +    L V+RHS AH+ A+A+Q + PE ++ IGP  +DGFYYD         ++L  
Sbjct: 62  VTDQSDEYLDVLRHSAAHVFAQALQRLHPEAKLTIGPWTDDGFYYDVTSVD-LEQEDLEA 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPA-KENVTLYRQGEWF 180
           IE +M++II  D    +  +  E+A E  +     YK +ILE   A  + ++ Y+QGE+ 
Sbjct: 121 IEDEMRDIIEEDLDIERVVVDREEALE--KYADNPYKRDILEEEAAGDDELSFYQQGEFE 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLC+GPHV STG++    KL+ ++ AYWRGD +   L+R+YGTA+ ++ +L ++L   EE
Sbjct: 179 DLCKGPHVESTGEIG-AVKLLNISAAYWRGDEDNDTLTRVYGTAFESESDLEEFLEMREE 237

Query: 241 SEKRDHRKLAREMDLFHIAEDG-SGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           +++RDHRKL +E++LF I E    G+  +   G +I   L  Y ++  +   Y+ + TP 
Sbjct: 238 AKERDHRKLGQELNLFAIDETTGPGLPLYQPNGKRILDELADYAKQLNLDAGYDPVETPH 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW++SGH+++Y  +MF +   D        + LKPMNCPGH  +F+    SYR+L
Sbjct: 298 LFRTELWKKSGHYENYVDDMFLLDVND------EEYGLKPMNCPGHATIFDQQSWSYRDL 351

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           PVR  E G VYR E  G L GL RV  FT DD H+F   +Q+ +E   I + I++++  F
Sbjct: 352 PVRYFEDGKVYRKEQRGELSGLSRVWSFTIDDGHLFVRPDQIEDEINLIIDNILTVFDTF 411

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           G +  +  L+TRP+K VGSD +W+ AE  ++ VLD         I+ G+  G+GAFYGPK
Sbjct: 412 GLDAEVA-LATRPDKSVGSDEIWEQAETQLRAVLDDSG------IDYGIEAGDGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++  KDA+GR W   T+Q+DFN+P RF+  Y    +E   PVMIHRA++GS ERF  ++
Sbjct: 465 IDFAFKDALGRKWDGPTVQLDFNMPDRFDLTYTGEDNEDHQPVMIHRALYGSYERFFMVL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+F G  P WL+P Q  +  I+   + YA+++   L      ++ + R+ T+  KIRE 
Sbjct: 525 IEHFNGKFPFWLAPEQVRILPISDDQIGYAKKLQYELND--FRVDIEDRSWTLGRKIREA 582

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
              ++P ++I G  E  + +I +R       + VS+      L  E
Sbjct: 583 QTDRVPYMVIVGGDEEEDGTISVRDRKEREAKDVSVEAFRDHLRSE 628


>gi|111224550|ref|YP_715344.1| threonyl-tRNA synthetase [Frankia alni ACN14a]
 gi|111152082|emb|CAJ63808.1| Threonyl-tRNA synthetase (Threonine--tRNA ligase) [Frankia alni
           ACN14a]
          Length = 692

 Score =  565 bits (1456), Expect = e-159,   Method: Composition-based stats.
 Identities = 249/671 (37%), Positives = 372/671 (55%), Gaps = 50/671 (7%)

Query: 3   SDIKLTFPDGS---IKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI 59
           SD+++T         +  P   T +D+         +  +A  ++G+  DL+  + +G++
Sbjct: 30  SDVRVTVQHAQRSDPRVVPTGTTAADLFAD-----DRDVIAALVDGQQRDLAHVLDDGAV 84

Query: 60  -EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
            E I    P   A++RHS AH++A+AVQ ++P+ ++ IGP I++GFYYDFD E PF+ ++
Sbjct: 85  VEPIAIGSPAGRAIVRHSAAHVVAQAVQDLFPKARLGIGPPIDNGFYYDFDVETPFTPED 144

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL---------------- 162
           L  IEKK Q II     F ++ ++ E+AR   E   E YK+E++                
Sbjct: 145 LKAIEKKAQAIIKAGQRFSRRVVTEEQARA--ELAAEPYKIELIGLKSSAGEDAEAEADA 202

Query: 163 --ESIPAKENVTLYRQGE-------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSN 213
                     +T+Y   +       W DLCRGPHV ST  +  F  L   A AYWRG   
Sbjct: 203 EAAVEVGAGELTIYDNLDAKTGELCWKDLCRGPHVPSTRSIPAFAILRS-AAAYWRGSEK 261

Query: 214 RPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKG 272
            P L RIYGTAW ++  L  Y   L E+EKRDHR+L  E+DLF    + G G+  +H KG
Sbjct: 262 NPQLQRIYGTAWESRDALKAYQTRLAEAEKRDHRRLGAELDLFSFPTEIGPGLAVFHPKG 321

Query: 273 WKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
             I   +  Y RR  I+  Y  +NTP +    L++ SGH D +   M+     D      
Sbjct: 322 GAIRTAMEDYARRRHIEAGYSFVNTPHITKSDLYEISGHLDWFADGMYPPMELDG----G 377

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
             + LKPMNCP H+ ++    +SYRELP+RL EFG+VYR E SG +HGL RVRG TQDDA
Sbjct: 378 TDYYLKPMNCPMHILIYRSRGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRVRGLTQDDA 437

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR-VGSDALWDDAENIMKG 450
           H+FC +EQ+  E   + N ++ + +D+G     ++LST+PE + VG+DA W++A  +++ 
Sbjct: 438 HLFCAREQLPAELDSVLNFVLGLLRDYGLSDFYLELSTKPEGKAVGTDAEWEEATELLRA 497

Query: 451 VLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFY 510
                    +  +   +  G GAFYGPK     +DAIGR WQ  TIQVDF LP RF+  Y
Sbjct: 498 AAQ------KQDLELVLDAGGGAFYGPKISVQARDAIGRTWQLSTIQVDFQLPQRFDLEY 551

Query: 511 VNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQE 570
             +   +  P MIHRA+FG+IERF+ I++E++ G LP WL+P+QAI   IT   V Y   
Sbjct: 552 QAADGTRQRPFMIHRALFGTIERFLAILLEHYAGALPPWLAPVQAIGIPITDEHVPYLDG 611

Query: 571 IANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
           +A  L +H + +E D  ++ +  KIR    +K+P +++ GD++ ++ ++  R    T   
Sbjct: 612 VAAKLSAHGVRVEVDSSDDRMQKKIRTAQKQKVPFMLLAGDEDVAKGAVSFRFRDGTQRN 671

Query: 631 KVSLLDAIPIL 641
            V + DA+  +
Sbjct: 672 GVPVDDAVAEI 682


>gi|302561695|ref|ZP_07314037.1| threonyl-tRNA synthetase [Streptomyces griseoflavus Tu4000]
 gi|302479313|gb|EFL42406.1| threonyl-tRNA synthetase [Streptomyces griseoflavus Tu4000]
          Length = 658

 Score =  565 bits (1456), Expect = e-159,   Method: Composition-based stats.
 Identities = 262/662 (39%), Positives = 379/662 (57%), Gaps = 38/662 (5%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           SD+++     S +   V  TG+  AE  +    +  +A  + G++ DLS  V +G ++E 
Sbjct: 2   SDVRVIIQRDSEREERVVTTGTTAAELFAGE--RSVIAARVAGELKDLSYEVADGETVEG 59

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +       L ++RHS AH+MA+AVQ ++PE ++ IGP ++DGFYYDFD ++PF  D+L  
Sbjct: 60  VEISSEDGLDILRHSTAHVMAQAVQELFPEAKLGIGPPVKDGFYYDFDVDKPFHPDDLKA 119

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL------------ESIPAKE 169
           IEKKMQEI  R   F ++ ++ E ARE  E   E YK+E++            +      
Sbjct: 120 IEKKMQEIQKRGQRFSRRVVTDEAARE--ELADEPYKLELIGLKGSASHDDGADVEVGSG 177

Query: 170 NVTLYRQGE-------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYG 222
            +T+Y   +       W DLCRGPH+ +T  +  F KLM+ A AYWRG    PML RIYG
Sbjct: 178 ELTIYDNLDAKTGELCWKDLCRGPHLPTTRNIPAF-KLMRNAAAYWRGSEKNPMLQRIYG 236

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLIS 281
           TAW T+ EL  +L FL E+EKRDHRKL  E+DLF I  + GSG+  +H KG  I + +  
Sbjct: 237 TAWPTKDELKAHLEFLAEAEKRDHRKLGSELDLFSIPEQIGSGLAVFHPKGGIIRRVMED 296

Query: 282 YMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
           Y RR   ++ YE + TP      L++ SGH D Y   M+     D    +   + LKPMN
Sbjct: 297 YSRRRHEEEGYEFVYTPHATKGKLFETSGHLDWYADGMYPPMQLD----EGVDYYLKPMN 352

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
           CP H  +F+   +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDDAH++CT+EQM
Sbjct: 353 CPMHNLIFDARGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYCTREQM 412

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDTIKNSS 459
             E  K    ++++ +D+G     ++LST+  +  VGSD  W++A   ++ V +      
Sbjct: 413 SEELDKTLTFVLNLLRDYGLTDFYLELSTKDPEKFVGSDEAWEEATQTLREVAE------ 466

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
           +  +      G  AFYGPK     KDAIGR WQ  TIQ+DFNLP RF+  Y  +   K  
Sbjct: 467 KQGLELVADPGGAAFYGPKISVQTKDAIGRTWQMSTIQLDFNLPERFDLEYTAADGSKTR 526

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH 579
           PVMIHRA+FGSIERF  +++E++ G  P WL+P+QA+   +  + VEY ++ A   +   
Sbjct: 527 PVMIHRALFGSIERFFAVLLEHYAGAFPAWLAPVQAVGIPVGDAHVEYLEKFATEARQKG 586

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
           L +E D  ++ +  KIR     K+P +II GD++ +  ++  R    +    +    A+ 
Sbjct: 587 LRVEVDSSSDRMQKKIRTQQKLKVPFMIIVGDEDMNAGTVSFRYRDGSQENGIPREQALA 646

Query: 640 IL 641
            L
Sbjct: 647 KL 648


>gi|294790871|ref|ZP_06756029.1| threonine--tRNA ligase [Scardovia inopinata F0304]
 gi|294458768|gb|EFG27121.1| threonine--tRNA ligase [Scardovia inopinata F0304]
          Length = 685

 Score =  565 bits (1456), Expect = e-159,   Method: Composition-based stats.
 Identities = 252/670 (37%), Positives = 381/670 (56%), Gaps = 43/670 (6%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IE 60
            S I +T  +G  +      TG  + +S      K  +AV +NG+  DL  P++ G  +E
Sbjct: 5   SSLIPITV-NGEHREVEPTVTGVQLFDS-----DKSVIAVRLNGQPRDLYTPLKAGDFVE 58

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            I       LA++RHS  H+MA+AVQ I+P+ ++ IGP+IEDGFYYDFD ++PF+ +++ 
Sbjct: 59  SIDINSKDGLAIMRHSATHVMAQAVQEIYPQAKLGIGPVIEDGFYYDFDVDKPFTPEDMK 118

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPA-----------KE 169
           +IEK+MQ II     F ++ ++ ++AR+  E   + YK+E+++S              + 
Sbjct: 119 EIEKRMQRIIKSSQSFRRRIVTEDQARQ--EEADQPYKLELIDSAEEAIDQGKDTEVSQG 176

Query: 170 NVTLYRQGE------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
            +T+Y   +      W DLC GPH+ +T  +K F KL + AGAYWRG    PML RIYGT
Sbjct: 177 QLTMYDNCDREGTVVWTDLCHGPHLPNTRYIKAF-KLQRTAGAYWRGSEKNPMLQRIYGT 235

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISY 282
           AW ++++L  YL  LEE+ KRDHRKL  EMDLF   ++ G G+  +H KG  +   +  Y
Sbjct: 236 AWASKEDLKAYLQRLEEAAKRDHRKLGAEMDLFSFPDEIGPGLAVFHPKGAAVINAMKEY 295

Query: 283 MR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT-------IKDLRTF 334
            R    K+ Y  + TP +    L++ SGH   Y+  M+     D+        I++   +
Sbjct: 296 SRIEHRKNHYSFVQTPHITKGGLYETSGHLQWYKDGMYPPMHLDEEKDANGKVIREGFDY 355

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
            LKPMNCP H  +F    +SYRELP+RL EFG+VYR E SG +HGL RVRG TQDD+H++
Sbjct: 356 YLKPMNCPMHNLIFKSRQRSYRELPLRLFEFGTVYRYEKSGVVHGLTRVRGLTQDDSHIY 415

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLD 453
           CT+EQM  E   + + ++ + KDFG     ++LST+ E   VGSD +W++A   +  V  
Sbjct: 416 CTREQMKGELTSLLSFVLKLLKDFGLNDFYLELSTKDEHKYVGSDEIWEEATRTLAEVAR 475

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS 513
                    ++     G  AFYGPK     +DA+GR WQ  TIQ+DFNLP RF   Y+ +
Sbjct: 476 DSG------LDLVDDPGGAAFYGPKISVQARDALGRTWQLSTIQLDFNLPERFGLEYIAA 529

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIAN 573
              +  PVMIHRA+FG+IERF  I++E++ G  P WL+P+Q +   ++ +  +Y +EI +
Sbjct: 530 DGTRQRPVMIHRALFGAIERFFAILLEHYAGAFPAWLAPVQVLGVPVSEANSDYLKEILD 589

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            L    +  E D  ++    KIR  S  K P I+I GD + +  ++  R    +    V+
Sbjct: 590 RLDESLVRCEMDASDDRFGKKIRNASKSKTPFILIVGDDDQARGAVSFRFRDGSQLNGVA 649

Query: 634 LLDAIPILTK 643
           + +A+  + +
Sbjct: 650 VDNALAWINQ 659


>gi|15835484|ref|NP_297243.1| threonyl-tRNA synthetase [Chlamydia muridarum Nigg]
 gi|270285665|ref|ZP_06195059.1| threonyl-tRNA synthetase [Chlamydia muridarum Nigg]
 gi|270289673|ref|ZP_06195975.1| threonyl-tRNA synthetase [Chlamydia muridarum Weiss]
 gi|301337060|ref|ZP_07225262.1| threonyl-tRNA synthetase [Chlamydia muridarum MopnTet14]
 gi|13878797|sp|Q9PJF9|SYT_CHLMU RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|7190897|gb|AAF39666.1| threonyl-tRNA synthetase [Chlamydia muridarum Nigg]
          Length = 635

 Score =  565 bits (1455), Expect = e-158,   Method: Composition-based stats.
 Identities = 245/631 (38%), Positives = 361/631 (57%), Gaps = 19/631 (3%)

Query: 16  NFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIR 74
             P  A+  D+A  +  S         IN +  DLS  +++G ++  +T +DP+   +  
Sbjct: 12  ELPEGASAMDLASKMKNSHCFA--GALINDQEKDLSTTLKDGDTVLFLTWDDPQGREIFL 69

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDS 134
           H+ AHI+A+AV  +WP  Q  IGP+I+ GFYYDF      S ++   IE   + I     
Sbjct: 70  HTSAHILAQAVLRLWPSAQPTIGPVIDQGFYYDFA-NLSISEEDFPAIEAMAKAIAEEKL 128

Query: 135 PFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQV 194
              +Q  S +K   L       +K+E++  +P +  ++ Y+QGE+ DLCRGPH+ ST  V
Sbjct: 129 AISRQVFS-DKEETLAYFSDNPFKIELITELPEEATISAYKQGEFLDLCRGPHLPSTAPV 187

Query: 195 KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMD 254
           K F KL++ + AYWRGD ++  L RIYG A+ T +EL ++L+ LEE++KRDHR L  ++D
Sbjct: 188 KAF-KLLRTSAAYWRGDPSKESLIRIYGIAFPTTKELKEHLHQLEEAKKRDHRVLGTKLD 246

Query: 255 LFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDS 313
           LF      +G+ F+H +G  I+  LI Y +R      Y++I TPQ++ + LW+ SGHW++
Sbjct: 247 LFSQQSYSAGMPFFHPRGMVIWNALIDYWKRLHQLAGYQQIQTPQLMSRELWEISGHWEN 306

Query: 314 YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP 373
           Y+ NM+ +        D   +A+KPMNCPG +  +   L SYRE P+R+AE G V+R+E 
Sbjct: 307 YKENMYTLTV------DEEDYAIKPMNCPGCMLYYKTQLHSYREFPLRIAEIGHVHRHEL 360

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
           SG+L GLMRVR F QDDAHVF T EQ+  E L I NL+  +Y  FG +  +   +   + 
Sbjct: 361 SGALSGLMRVRTFHQDDAHVFLTPEQVEEETLNILNLVSELYGTFGLDYHLELSTRPEQG 420

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
            +GSD LW+ A   +K  L   +          +  GEGAFYGPK +  +KDAI R WQC
Sbjct: 421 TIGSDDLWELATEALKNALVKSQKP------FIISPGEGAFYGPKIDIHVKDAINRTWQC 474

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI 553
           GTIQ+D  LP RF+  Y N   EK  P+M+HRA+FGSIERF+GI+IE+FKG  PLWLSP 
Sbjct: 475 GTIQLDMFLPERFDLKYTNPQGEKSTPIMLHRALFGSIERFLGILIEHFKGRFPLWLSPE 534

Query: 554 QAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
              + T+       AQE+A       +    D  +E+++ KIR     ++  +I  GDKE
Sbjct: 535 HVRIITVADRHEARAQELAKYFTQQGILATVDQASESVSKKIRNAQNMQVNYMITIGDKE 594

Query: 614 ASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
              + + +R   +     +S+      + +E
Sbjct: 595 LETQLLAVRTRDNRVLNDISVEHFTNTILEE 625


>gi|330443967|ref|YP_004376953.1| threonyl-tRNA synthetase [Chlamydophila pecorum E58]
 gi|328807077|gb|AEB41250.1| threonyl-tRNA synthetase [Chlamydophila pecorum E58]
          Length = 635

 Score =  565 bits (1455), Expect = e-158,   Method: Composition-based stats.
 Identities = 243/637 (38%), Positives = 372/637 (58%), Gaps = 19/637 (2%)

Query: 11  DGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRS 69
           +      P     +D A  +  S  +  + V I+G+  DL  P++EG ++  IT ED   
Sbjct: 7   NQEEHELPEGTVAADFASKMKDS--QNFIGVLIDGQPKDLLTPLQEGNTVTFITSEDSHG 64

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
             +  H+ AH++A+AV  +WP+ Q  IGP+I+ GFYYDF      S  +   IE+ + +I
Sbjct: 65  REIFLHTSAHLLAQAVLRLWPDAQPTIGPVIDQGFYYDFA-NLSISEKDFPAIEEMVAKI 123

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
           +  + P  +  L   K   L +     +K E++  +P  E ++ Y QGE+ DLCRGPH+ 
Sbjct: 124 VEEELPIARSVL-KTKDEALQKFSNNPFKAELIRELPENEEISAYAQGEFMDLCRGPHLP 182

Query: 190 STGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKL 249
           ST  VK F K+++ + AYWRGD +R  L R+YG ++ T QEL ++L+ LEE++KRDHR L
Sbjct: 183 STAPVKAF-KVLRTSAAYWRGDPSRESLVRVYGISFPTMQELKEHLHQLEEAKKRDHRVL 241

Query: 250 AREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQS 308
             ++DLF   E  +G+ F+H +G  I+  LI++ +    +  Y++I TPQ+++Q LW+ S
Sbjct: 242 GVKLDLFSQQEYAAGMPFFHPRGMIIWDALINFWKELHARAGYQQIKTPQLMNQRLWEIS 301

Query: 309 GHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV 368
           GHW +Y+ NM+ +        D   +A+KPMNCPG +  +   L SY+E P+R+AE G V
Sbjct: 302 GHWQNYKENMYTLTL------DEENYAIKPMNCPGCMLYYKTHLHSYKEFPLRVAEIGHV 355

Query: 369 YRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLS 428
           +R+E SG+L GLMRVR F QDDAHVF T EQ+  E L I +L+  +Y  FG    +   +
Sbjct: 356 HRHEVSGALSGLMRVRAFHQDDAHVFLTPEQVEEETLNILDLVAKLYHTFGLAYHLELST 415

Query: 429 TRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIG 488
                 +GSD LW+ A + ++  L+   +S        +   EGAFYGPK +  +KDAI 
Sbjct: 416 RPKTGTIGSDELWEHATSALQRALEKSGSS------FIITPEEGAFYGPKIDIHVKDAIN 469

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPL 548
           R WQCGTIQ+D  LP RF+  Y N+   K  PVM+HRA+FGSIERF+GI+IE+FKG  PL
Sbjct: 470 RTWQCGTIQLDMFLPERFHLEYTNAEGGKSIPVMLHRALFGSIERFLGILIEHFKGKFPL 529

Query: 549 WLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIII 608
           W+SP Q  + T+    +  A+E+A   ++  L +  D  +E+++ KIR     ++  ++ 
Sbjct: 530 WISPEQVRLITVADRHIPRARELAQKWQNLGLVVTVDDASESVSKKIRNAQTMQVNYMVT 589

Query: 609 CGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
            GD+E +  ++ IR   +     VS    +  + +E 
Sbjct: 590 LGDQEVANNTLAIRTRDNRVINDVSEEKFLNAILEEK 626


>gi|297198372|ref|ZP_06915769.1| threonyl-tRNA synthetase [Streptomyces sviceus ATCC 29083]
 gi|197714430|gb|EDY58464.1| threonyl-tRNA synthetase [Streptomyces sviceus ATCC 29083]
          Length = 658

 Score =  565 bits (1455), Expect = e-158,   Method: Composition-based stats.
 Identities = 266/664 (40%), Positives = 379/664 (57%), Gaps = 38/664 (5%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIEII 62
           SD+++     S +   V  TG+  AE  +    +  VA  + G++ DL+  + EG     
Sbjct: 2   SDVRVIIHRDSEREERVVTTGTTAAELFAGE--RSIVAARVGGELKDLAYVLSEGEEVEG 59

Query: 63  T-PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
                   L ++RHS AH+MA+AVQ ++PE ++ IGP ++DGFYYDFD E+PF+ ++L  
Sbjct: 60  VEISSEDGLNILRHSTAHVMAQAVQELFPEAKLGIGPPVKDGFYYDFDVEKPFTPEDLKA 119

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL------------ESIPAKE 169
           IEKKMQEI  R   F ++ ++ E ARE  E   E YK+E++            +      
Sbjct: 120 IEKKMQEIQKRGQKFSRRVVTDEAARE--ELSDEPYKLELIGLKGSASSDDGADVEVGSG 177

Query: 170 NVTLYRQGE-------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYG 222
            +T+Y   +       W DLCRGPH+ ST  +  F KLM+ A AYWRG    PML RIYG
Sbjct: 178 ELTIYDNLDAKTGDLCWKDLCRGPHLPSTRAIPAF-KLMRNAAAYWRGSEKNPMLQRIYG 236

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLIS 281
           TAW T+ EL  +L FL E+EKRDHRKL  E+DLF I  + GSG+  +H KG  I + +  
Sbjct: 237 TAWPTKDELKAHLDFLAEAEKRDHRKLGSELDLFSIPEQIGSGLAVFHPKGGIIRRVMED 296

Query: 282 YMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
           Y RR   ++ YE + TP      L++QSGH D Y   M+     D    +   + LKPMN
Sbjct: 297 YSRRRHEEEGYEFVYTPHATKGKLFEQSGHLDWYADGMYPPMQLD----EGVDYYLKPMN 352

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
           CP H  +F+   +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDDAH++CT+EQM
Sbjct: 353 CPMHNLIFDARGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYCTREQM 412

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDTIKNSS 459
             E  K    ++ + +D+G     ++LST+  +  VGSD +W++A   ++ V +      
Sbjct: 413 SEELDKTLTFVLGLLRDYGLTDFYLELSTKDPEKFVGSDEVWEEATETLRQVAE------ 466

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
           +  +      G  AFYGPK     KDAIGR WQ  TIQ+DFNLP RF   Y +    K  
Sbjct: 467 KQGLPLVPDPGGAAFYGPKISVQTKDAIGRTWQMSTIQLDFNLPERFELEYTSPDGSKQR 526

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH 579
           PVMIHRA+FGSIERF  +++E++ G  P WL+P+QA+   I  + VEY ++ A   K   
Sbjct: 527 PVMIHRALFGSIERFFAVLLEHYAGAFPAWLAPVQALGIPIGDAHVEYLEKFAAAAKKQG 586

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
           L +E D  ++ +  KIR    +K+P ++I GD++ +  S+  R    +    +   +AI 
Sbjct: 587 LRVEVDSSSDRMQKKIRNAQKQKVPFMVIAGDEDMAGGSVSFRYRDGSQENGIPFDEAIA 646

Query: 640 ILTK 643
            + K
Sbjct: 647 KIAK 650


>gi|302404307|ref|XP_002999991.1| threonyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
 gi|261361173|gb|EEY23601.1| threonyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
          Length = 790

 Score =  565 bits (1455), Expect = e-158,   Method: Composition-based stats.
 Identities = 226/692 (32%), Positives = 356/692 (51%), Gaps = 63/692 (9%)

Query: 3   SDIKLTFPDGSIKN-FPVHATGSDVAESISRSLAKKAVAVAIN---GKVCDLSDPVR-EG 57
             I++T PDG+IK       T  ++A+ IS SL K+ V   +N    ++ DL  P+    
Sbjct: 87  KPIEITMPDGTIKAGTSWETTPGEIAKGISNSLYKRTVVARLNKDPNQLWDLDRPLEASC 146

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFS-- 115
            +E++  +D +   V  HS AHI+ EA +  +    + IGP +++GFYY+       S  
Sbjct: 147 KLELLNFDDEQGKQVFWHSSAHILGEACERRF-GCSLCIGPPVDNGFYYEMALPGGASVQ 205

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES-IPAKENVTLY 174
           + +   +E  +  I+     F +  ++ ++  E+       YK  I++  I      T+Y
Sbjct: 206 ASDWKPLESIVGSIVKEKQKFERLEMTKDELLEM--FSYNKYKQHIIKDKIADGTKTTVY 263

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
           R G   DLCRGPHV ST +++ F  +MK + +Y+ G      L R+YG ++ +++EL  +
Sbjct: 264 RNGPLIDLCRGPHVPSTERIEAFS-IMKNSASYFLGSQENDSLQRVYGVSFPSKKELAAH 322

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEE 293
             +LEE+  RDHRKL  +  LF   E   G   W   G +I+ TL++Y++ +  K DY E
Sbjct: 323 KKWLEEAAARDHRKLGEQQQLFFFHELSPGSAMWLPHGARIYNTLMAYIKEQYFKRDYHE 382

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           + TP + +  LW+ SGHW  Y+ +MF +        D   FALKPMNCPGH  +F H  K
Sbjct: 383 VITPNMYNSDLWKVSGHWAHYKDDMFVMDV------DKEQFALKPMNCPGHCLMFGHAPK 436

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           +Y +LP R+A+FG ++RNE SG+L GL RVR F QDDAH+FC ++Q+  E   + + + S
Sbjct: 437 AYHQLPWRVADFGVLHRNEASGALSGLTRVRRFQQDDAHIFCREDQIGQEITNLFDFLRS 496

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           +Y   GF   + +LSTRP+K +G  A WD AE+++K  LD    +++  +   +  G+GA
Sbjct: 497 MYSLLGFTYKL-RLSTRPDKFMGERATWDRAEDMLKVALDEF-AATEGGVAWELNEGDGA 554

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH--------PVMIHR 525
           FYGPK +  + D + R+WQC TIQ+DF LP  F   YV + S            P +  +
Sbjct: 555 FYGPKIDIKILDCLNREWQCATIQLDFQLPINFGLEYVTADSAAKTKEDAAIKGPEVKAK 614

Query: 526 AVFGSIE------------------------------RFIGIMIENFKGNLPLWLSPIQA 555
                +E                              R   I+IE+F G  P+WLSP Q 
Sbjct: 615 EPEAVVESAAAAAAPAAADGKEPAKKQLRMSKPLTWKRPPRILIEHFGGKWPMWLSPRQI 674

Query: 556 IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEAS 615
            +  +     EYA+E+  + K     ++ D   ET+  K+R   + +   + I GD+E  
Sbjct: 675 QIIPVGRGFFEYAEEVQKIFKDAGFWVDVDLSGETLQKKVRRAQLAQYNFVFIVGDEEMK 734

Query: 616 ERSIGIRRFGSTTTQK----VSLLDAIPILTK 643
            R + +R    T++Q     V + +AI  L +
Sbjct: 735 GRQVNVRYRDDTSSQDRGKPVDVNEAITKLKE 766


>gi|300087925|ref|YP_003758447.1| threonyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
 gi|299527658|gb|ADJ26126.1| threonyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
          Length = 584

 Score =  565 bits (1455), Expect = e-158,   Method: Composition-based stats.
 Identities = 241/581 (41%), Positives = 356/581 (61%), Gaps = 16/581 (2%)

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
            D   L  IRHS AHIMA+AV  I+P  +  IGP I++GFYYDF+  +P   ++LA+IE 
Sbjct: 5   TDQSKLEAIRHSAAHIMAQAVLRIFPSARFGIGPAIDNGFYYDFELPRPLVPEDLAEIEA 64

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
            M  I+  + PF ++ ++ ++A EL     + YK+E++  +P  E +T+YR G++FDLCR
Sbjct: 65  GMTAIVKENQPFSRETVTRQQAEEL--FASQPYKLELIRELPNDEEITIYRNGDFFDLCR 122

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV  T +VK F KL+ +AGAYWRGD   PML RIYGTA+  + EL +YL  L E+E R
Sbjct: 123 GPHVSHTARVKSF-KLLSIAGAYWRGDEKNPMLQRIYGTAFGNRTELDEYLTSLAEAEAR 181

Query: 245 DHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           DHR++ ++++LF   ED G G++ +  K  +I  T+  + R+      YE + TP +   
Sbjct: 182 DHRRINKQLNLFVTPEDVGGGLVIYGPKAGRIRTTVEEFWRKAHYDHGYELLYTPHIGRS 241

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
           +LW+ SGH  +YR  M++         D + + +KPMNCP H+  +   ++SYR+LP+R 
Sbjct: 242 NLWETSGHLQNYRDIMYSPMDI-----DGQDYYVKPMNCPFHILFYKSQMRSYRDLPLRW 296

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AE G+VYR E SG LHGL+RVRGFTQDDAH+ CT EQ+  E  ++      +++ FGF  
Sbjct: 297 AELGTVYRYERSGVLHGLLRVRGFTQDDAHIICTPEQIETEIDEVLRFSFEMWRTFGFTD 356

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           + + L+TRPEK +G+D  W  A + ++ V+D         +   +  G GAFYGPK +  
Sbjct: 357 LKLFLATRPEKAIGTDLQWQQASDALRRVMDA------RGLEYSLDEGGGAFYGPKIDIK 410

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           ++D +GR+WQ  TIQ DFNLP RF+  Y     ++  P M+HRA+ GS ERF G++IE++
Sbjct: 411 VRDVLGREWQMTTIQFDFNLPERFDMVYTGQDGQEHRPYMVHRALLGSWERFFGLLIEHY 470

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P+WL P Q  V  I    +EYAQEI   LK   + +  D R+ET+N KIR+  + K
Sbjct: 471 GGAFPVWLHPEQVAVLPIADRHLEYAQEITAKLKKAGVRVALDDRSETVNMKIRQAQLDK 530

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           IP I++ GDKE  + ++ +R         V   D + ++ +
Sbjct: 531 IPYIVVIGDKELEKGTLAVRLRTGQQKFGVPPNDFVTLIRQ 571


>gi|271967410|ref|YP_003341606.1| threonyl-tRNA synthetase [Streptosporangium roseum DSM 43021]
 gi|270510585|gb|ACZ88863.1| threonyl-tRNA synthetase [Streptosporangium roseum DSM 43021]
          Length = 659

 Score =  564 bits (1454), Expect = e-158,   Method: Composition-based stats.
 Identities = 250/670 (37%), Positives = 379/670 (56%), Gaps = 46/670 (6%)

Query: 1   MPS--DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS 58
           M +  ++++T   G+ +      T  +  ++  RS     VA   NG++ DL+  V EG 
Sbjct: 1   MSAVPELRITLA-GAERVVAEGTTYGEALQADGRS----VVAARANGELRDLAARVAEGD 55

Query: 59  -IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSD 117
            +E +    P   A++RHS AH+MA+AVQ ++PE ++ IGP +++GFYYDFD + PF+ +
Sbjct: 56  EVEPVEVGSPDGRAIVRHSTAHVMAQAVQELFPEAKLGIGPPVDNGFYYDFDVKNPFTPE 115

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIP----------- 166
           +L ++EK+M+EI+ +   F ++ +S E A E  E   E YK+E++               
Sbjct: 116 DLKRVEKRMREIVKQGQIFSRRPVSDEDALE--ELAAEPYKLELIGLKGGAGAQADGADV 173

Query: 167 --AKENVTLYRQGE-------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPML 217
                 +T+Y   +       W DLCRGPHV +T  +  F KLM+  GAYWRG    P L
Sbjct: 174 EVGGAELTIYDNLDPKTGDLCWKDLCRGPHVPTTRSIPAF-KLMRSGGAYWRGSEKNPQL 232

Query: 218 SRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIF 276
            RIYGTAW ++ +  +YL+ LEE+EKRDHR+L  E+DLF    + GSG+  +H KG  I 
Sbjct: 233 QRIYGTAWESRDKQDEYLHMLEEAEKRDHRRLGAELDLFSFPSELGSGLPVFHPKGGIIR 292

Query: 277 QTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFA 335
           + +  YMRR+  +  YE +NTP +    L++ SGH   Y  +MF          +   + 
Sbjct: 293 KEMEDYMRRRQGEAGYEFVNTPHITKSQLFETSGHLPWYAEDMFPPFEL-----EGVEYR 347

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC 395
           +KPMNCP H  +F    +SYRELP+RL EFGSVYR E SG +HGL RVRG TQDD+H++C
Sbjct: 348 VKPMNCPMHNLIFRARGRSYRELPLRLCEFGSVYRYEKSGVVHGLTRVRGMTQDDSHIYC 407

Query: 396 TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE--KRVGSDALWDDAENIMKGVLD 453
           T+EQM  E   +   ++S+ +DFG  +  ++LSTR +  K +G  A WD+A + ++    
Sbjct: 408 TREQMVGEIKSLLTFVLSVLRDFGLSEFYLELSTRDDSDKFIGDPADWDEATDALR---- 463

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS 513
             + + +  +      G  AFYGPK     KDAIGR WQ  TIQ+D N P RF   Y  +
Sbjct: 464 --QTALESGLELVDDPGGAAFYGPKISVQAKDAIGRTWQLSTIQLDLNQPKRFELEYQAA 521

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIAN 573
              +  PVMIHRA+FGSIERF+G++ E++ G  P WL+P+Q +   I  +   Y Q++A 
Sbjct: 522 DGSRQTPVMIHRALFGSIERFLGVLTEHYAGAFPPWLAPVQVVGIPIAEAHASYLQDVAK 581

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
             +   + IE D  ++ +  KIR     K+P +++ GD++ +  ++  R         V 
Sbjct: 582 RARERGIRIEVDASDDRMQKKIRNAQKSKVPFMLLAGDEDIANGAVSFRFRNGEQKNGVP 641

Query: 634 LLDAIPILTK 643
           + +AI  +  
Sbjct: 642 VDEAINEIVD 651


>gi|269925242|ref|YP_003321865.1| threonyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
 gi|269788902|gb|ACZ41043.1| threonyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
          Length = 596

 Score =  564 bits (1454), Expect = e-158,   Method: Composition-based stats.
 Identities = 228/587 (38%), Positives = 371/587 (63%), Gaps = 19/587 (3%)

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            E    L+ +RHS AH+MA AV  ++P+ +  IGP IE+GFYYDF+  +P + ++  +IE
Sbjct: 18  MESGSLLSTMRHSAAHVMAAAVLQMFPDAKFGIGPAIENGFYYDFELPRPITPEDFPEIE 77

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           ++M+++I  D PF+++ +S ++A+E+   + + YK+EI++ +P    +++Y+   + DLC
Sbjct: 78  ERMRQLIEEDHPFIREEISRQQAKEM--FRDQPYKLEIIDDLPEDAVISIYKMAHFTDLC 135

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV STG++  F KL+ VA AYWRGD  RP L RIYGTA+ TQ+EL  YL+ LEE+++
Sbjct: 136 RGPHVESTGKIGPF-KLLSVASAYWRGDEKRPQLQRIYGTAFPTQEELDDYLWRLEEAKR 194

Query: 244 RDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           RDHRK+ R+++LF I+++ G G++ W   G  I + L +++ + + ++ Y+ + TP +  
Sbjct: 195 RDHRKIGRDLELFMISDEVGPGLVLWLPNGSIIRRELENFIVKAEAREGYQHVYTPHIAK 254

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             L++ SGHW  YR  MF        ++D   + L+PM CP H+ ++ H L+SYR+LP+R
Sbjct: 255 LGLYKTSGHWQHYRDAMFPPMV----LEDGEEYELRPMTCPHHIMIYKHSLRSYRDLPLR 310

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AE G+VYR E SG L G+ RVRGFT +DAH+FC  +Q+  E +++  L+  +Y+  GF 
Sbjct: 311 IAELGTVYRYEKSGELTGMSRVRGFTINDAHIFCRPDQLKEEFIRVIQLMHEVYRAVGFH 370

Query: 422 KIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
             + +LS R      K V  D +W++AEN ++  LD +        +     GE AFYGP
Sbjct: 371 DYVYRLSLRDPSDKEKYVEGDEMWNNAENAIRQALDELGA------DYVEAEGEAAFYGP 424

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K + +++D +GR++   T Q+DF LP RF+  Y+++  E+  PVMIHRA  GS+ERF   
Sbjct: 425 KLDVMVRDVLGREFAASTNQLDFYLPERFDLEYIDADGERRRPVMIHRAPIGSMERFFAF 484

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E   G  P+WLSP+Q +V  I    + YA+E+A+    H++ +  D RNE +N KIR+
Sbjct: 485 LTEQHAGAFPVWLSPVQVVVIPIADRHIPYAEEVASAFSRHNVRVNVDARNERMNAKIRD 544

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
             ++KIP ++I GD+EA   ++ +R+      +   + D + ++  +
Sbjct: 545 AQMQKIPYMLIVGDREAQAGTVAVRKRSGEDLKGQPVQDVVQMVLDD 591


>gi|87122885|ref|ZP_01078753.1| threonyl-tRNA synthetase [Marinomonas sp. MED121]
 gi|86161836|gb|EAQ63133.1| threonyl-tRNA synthetase [Marinomonas sp. MED121]
          Length = 572

 Score =  564 bits (1453), Expect = e-158,   Method: Composition-based stats.
 Identities = 280/587 (47%), Positives = 393/587 (66%), Gaps = 19/587 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP    +T PDGS + F    T   VA+ I   LAK  VA  ING++ D  + + ++ ++
Sbjct: 1   MPV---ITLPDGSQRVFENAVTVMQVAQDIGPGLAKATVAGRINGELVDACELINQDANL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            I+T +D   L +IRHS AH++  AV+ ++P  ++AIGP IE+GFYYD   E+  + +++
Sbjct: 58  SIVTGKDEDGLEIIRHSFAHLVGHAVKQLFPTAKMAIGPTIENGFYYDIAYERSLTLEDM 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-ENVTLYRQGE 178
           A +EK++ E+I  D    K+     +AR LF  ++E YKVE+++ +      V LY   E
Sbjct: 118 AAVEKRIGELIKTDYDVNKRMTPVAEARALFVEREEDYKVELIDGLDESISEVGLYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +T  ++ F KLMK+AGAYWRGDSN  ML RIYGTAWN ++EL  +L+ L
Sbjct: 178 YTDMCRGPHVPNTRVLRHF-KLMKLAGAYWRGDSNNAMLQRIYGTAWNDKKELKAHLHRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+EKRDHRKL +++DLFH  E+  G++FWH KGW ++QT+  Y+R+K ++  Y+EI TP
Sbjct: 237 EEAEKRDHRKLGKKLDLFHQQEEAPGMVFWHHKGWSLYQTIEQYIRQKQRENGYQEIKTP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           Q++D+ LW++SGHW  + + MF       T  + R +A+KPMNCP HV V+N GLKSYR+
Sbjct: 297 QIVDRVLWEKSGHWGKFSSGMFT------THAENRDYAIKPMNCPCHVQVYNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+RLAEFGS +RNEPSGSLHG+MRVR F QDD H+F  ++Q+  E      L+  IY D
Sbjct: 351 LPLRLAEFGSCHRNEPSGSLHGIMRVRNFVQDDGHIFVMEDQIQEEVSAFIKLLHEIYDD 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF  I+ +LSTRPE+RVGSD +WD +E  +   L+      ++      L GEGAFYGP
Sbjct: 411 FGFTDIIYRLSTRPEQRVGSDEVWDKSEKALAEALNAANLEWEE------LPGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ LKDAIGR WQCGTIQ DF++PSR +A +V+    +  PVM+HRA+ GS+ERFIGI
Sbjct: 465 KIEFSLKDAIGRIWQCGTIQCDFSMPSRLSAQFVSEDGTRQTPVMLHRAILGSLERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIET 584
           +IE  +G+LP WLSP Q +V  IT    +Y +++     S+ L  + 
Sbjct: 525 LIEETEGSLPAWLSPEQVVVMNITDRQSQYCEDLVKRFNSNGLRAKL 571


>gi|153812461|ref|ZP_01965129.1| hypothetical protein RUMOBE_02860 [Ruminococcus obeum ATCC 29174]
 gi|149831386|gb|EDM86474.1| hypothetical protein RUMOBE_02860 [Ruminococcus obeum ATCC 29174]
          Length = 657

 Score =  564 bits (1453), Expect = e-158,   Method: Composition-based stats.
 Identities = 231/646 (35%), Positives = 351/646 (54%), Gaps = 19/646 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T  DGS K +    +  D+A  IS  LA+ A A  +NG+V DL   +  +  + I+T +
Sbjct: 3   ITLKDGSKKEYSEAKSVIDIAYDISEGLARAACAGEVNGEVVDLRTVLDSDCELNILTAK 62

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D + LAV+RH+ +H++A+AVQ+++PE +VAIGP I+ GFYYDF  E PFS ++L +IEK+
Sbjct: 63  DEKGLAVLRHTASHVLAQAVQTLYPEAKVAIGPSIDTGFYYDFAHE-PFSREDLDEIEKE 121

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M++II + +   +   S E A   F+ K E YKVE++E +P  E ++ Y QG+W DLC G
Sbjct: 122 MKKIIKKGAKIERFTKSREDAIAFFKEKNEPYKVELIEDLPEGEEISFYSQGDWTDLCAG 181

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PH+ S   VK F KL+  + AYWRG     ML+RIYGTA+ T+ EL ++L  +EE++KRD
Sbjct: 182 PHLMSVKGVKAF-KLLSSSSAYWRGSEKNAMLTRIYGTAYATKDELKEHLEQMEEAKKRD 240

Query: 246 HRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQH 303
           H KL REM +F      G G+      G  + Q L  ++   + K  Y    TP +    
Sbjct: 241 HNKLGREMKIFTTVDVIGQGLPLIMPNGVIMMQELQRWIEDEETKRGYVRTKTPLMAKSD 300

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           L++ SGHWD Y+  MF +    D   D   FAL+PM CP    V+     SYR+LP+R  
Sbjct: 301 LYKISGHWDHYKDGMFVL---GDEETDKEVFALRPMTCPFQYYVYKAEQHSYRDLPLRYG 357

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           E  +++RNE SG +HGL RVR FT  + H+    +QM  E      L     +  G E+ 
Sbjct: 358 ETSTLFRNEDSGEMHGLTRVRQFTISEGHLIVRPDQMVKEFKDCIALAQYCLQVLGVEED 417

Query: 424 MVKL-----STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           +            EK +G   +W++ E  ++ +L+ +       I     +GE AFYGPK
Sbjct: 418 VTYHLSKWDPNNREKYIGEPEVWNETEEDIRQMLEELN------IPFTEDVGEAAFYGPK 471

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +   K+  G++    TIQ D  L  +F+ +Y++ + +K  P +IHR   G  ER +  +
Sbjct: 472 VDINAKNVYGKEDTMITIQWDALLAEQFDMYYIDENGDKKRPCIIHRTSMGCYERTLAWL 531

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE + G  P WL P Q  V  I+     YA ++   +K   +    D R+E + YKIRE 
Sbjct: 532 IEKYAGMFPTWLCPEQVRVIPISEKFNAYADKVEAQMKEAGIRCSVDRRSEKMGYKIREA 591

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            ++++P +++ G KE  E  + +R           L + I  + +E
Sbjct: 592 RLERVPYMLVVGAKEEEEGKVSVRSRYLGDEGMKDLGEFIAAIKEE 637


>gi|294628375|ref|ZP_06706935.1| threonyl-tRNA synthetase [Streptomyces sp. e14]
 gi|292831708|gb|EFF90057.1| threonyl-tRNA synthetase [Streptomyces sp. e14]
          Length = 659

 Score =  564 bits (1453), Expect = e-158,   Method: Composition-based stats.
 Identities = 255/666 (38%), Positives = 380/666 (57%), Gaps = 41/666 (6%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           SD+++     S +      TG+  A+  +    +  VA  + G++ DL+  V++G ++E 
Sbjct: 2   SDVRVIIQRDSEREERTVTTGTTAADLFAGE--RTVVAARVGGELKDLAYEVKDGETVEG 59

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +       L ++RHS AH+MA+AVQ I+PE ++ IGP I DGFYYDFD ++PF+ ++L +
Sbjct: 60  VEISSEDGLNILRHSTAHVMAQAVQEIFPEAKLGIGPPIRDGFYYDFDVKEPFTPEDLKR 119

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-------------ESIPAK 168
           IEK+MQEI  R   F ++  + + AR   E   E YK+E++             ++    
Sbjct: 120 IEKRMQEIQKRGQKFSRRVTTDDDAR--VELADEPYKLELIGLKGNAAQAADGADAEVGS 177

Query: 169 ENVTLYRQGE-------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIY 221
             +T+Y   +       W DLCRGPH+ +T  +  F KLM+ A AYWRG    P L RIY
Sbjct: 178 GELTIYDNLDAKTGDLCWKDLCRGPHLPTTRNIPAF-KLMRSAAAYWRGSEKNPQLQRIY 236

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLI 280
           GTAW ++ EL QYL FL E+EKRDHRKL  E+DLF   ++ G G+  +H KG  + + + 
Sbjct: 237 GTAWPSKDELKQYLDFLAEAEKRDHRKLGAELDLFSFPDELGPGLAVFHPKGGVVRKVME 296

Query: 281 SYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPM 339
            Y RR+ +   YE +NTP +  +HL++ SGH   Y   MF     D+     + + LK M
Sbjct: 297 DYSRRRHEVSGYEFVNTPHISKEHLFEISGHLPHYAEGMFPPIQFDE-----QNYRLKAM 351

Query: 340 NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQ 399
           NCP H  +F    +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDD+H++CTKEQ
Sbjct: 352 NCPMHNLIFKSRGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRSRGFTQDDSHIYCTKEQ 411

Query: 400 MFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE--KRVGSDALWDDAENIMKGVLDTIKN 457
           M  E   +   ++ + +D+G  +  ++LSTR +  K +GSD  W +A   ++   +    
Sbjct: 412 MPQELDTLLTFVLDLLRDYGLTEFELELSTRDDSDKFIGSDEDWAEATEALRQAAE---- 467

Query: 458 SSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK 517
             +  +      G  A+YGPK    ++DAIGR WQ  TIQVDFN P RFN  Y  +   +
Sbjct: 468 --KQNLPLVPDPGGAAYYGPKISVQVRDAIGRSWQMSTIQVDFNQPKRFNLEYTAADGSR 525

Query: 518 CHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKS 577
             PVMIHRA+FGSIERF G+++E++ G  P WL+P+QA+   +  + V Y ++ A   KS
Sbjct: 526 RQPVMIHRALFGSIERFFGVLLEHYAGAFPAWLAPVQAVGIPVGDAHVGYLEKFALEAKS 585

Query: 578 HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
             L +E D  ++ +  KIR    +K+P +II GD + +  ++  R    +    +    A
Sbjct: 586 KGLRVEVDASSDRMQKKIRNAQKQKVPFMIIVGDDDMNAGTVSFRYRDGSQENGIPRDQA 645

Query: 638 IPILTK 643
           +  L  
Sbjct: 646 LAKLVD 651


>gi|189200603|ref|XP_001936638.1| threonyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187983737|gb|EDU49225.1| threonyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 768

 Score =  564 bits (1452), Expect = e-158,   Method: Composition-based stats.
 Identities = 238/686 (34%), Positives = 355/686 (51%), Gaps = 66/686 (9%)

Query: 11  DGSIKNFPVHAT-GSDVAESISRSLAKKAVAVAIN-----GKVCDLSDPVRE-GSIEIIT 63
           DG         T  +D+A +I++SL ++ V   ++       + DL  P+ +   +E++ 
Sbjct: 85  DGKNIEGESWVTSPADIARNIAKSLFERTVVARLDKGTPEETLWDLERPLEKSCKLELLP 144

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK--EQPFSSDELAQ 121
            +DP    V  HS AHI+ EA +  +    + IGP IEDGFYY+            +   
Sbjct: 145 FDDPEGKKVFWHSSAHILGEASERRF-GCDLCIGPPIEDGFYYEMALPDNAAVDPADHKP 203

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWF 180
           +E  +  I+    PF +  LS +   E+F+S    YK  I++   A     T+YR G   
Sbjct: 204 LETIVSSIVKEKQPFERLTLSKDDLLEMFKS--NKYKQHIIKDKIADGTFTTVYRNGPLI 261

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHV  TG++K+F K+MK + +Y+ GD+    L RIYG ++  +  +  +L FLEE
Sbjct: 262 DLCRGPHVPHTGRIKQF-KVMKNSASYFLGDAKNDSLQRIYGVSFPDKDAMQAHLKFLEE 320

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQV 299
           + KRDHRK+ +E +LF   E   G  F+   G  I+ TL +++R +     Y+E+ +P +
Sbjct: 321 AAKRDHRKIGKEQELFFFHEFSPGSCFFLPHGQIIYNTLQAFLREEYWNRGYQEVGSPNM 380

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +  LW+ SGHW  Y  +MF          +   +ALKPMNCPGH  +F H  +SYRELP
Sbjct: 381 YNSALWKISGHWQHYADDMFTFDV------EKEKWALKPMNCPGHCLIFKHRERSYRELP 434

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+A+FG ++RNE SG+L GL RVR F QDD HVFCT++Q+  E   + + + ++Y  FG
Sbjct: 435 IRMADFGILHRNEASGALTGLTRVRRFQQDDTHVFCTQDQITEEISALFDFLRAVYGKFG 494

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F   M KLSTRPE  +G    WD AE  +   L+    +        +  G+GAFYGPK 
Sbjct: 495 FTFKM-KLSTRPEGFLGDIETWDKAEAKLTEALNQFTAAGGSA--WELNPGDGAFYGPKI 551

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH------------------------- 514
           +  + DA+ R++QC TIQ+DF LP++F   Y+ S                          
Sbjct: 552 DITISDALKREFQCATIQLDFQLPNQFELEYMTSEVIPVKNKDQPQEGGHIEQKKEKLEG 611

Query: 515 -------------SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT 561
                             PVMIHRA++GS ERFI I+ E+F G  P WLSP Q +V  + 
Sbjct: 612 ADVTIPKKIKEPQPGYARPVMIHRAIYGSFERFIAILTEHFAGRWPFWLSPRQVMVIPVM 671

Query: 562 SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
             A +Y +E+   L+ H L  + D    T+  KIR   +     I++ G +E   R++  
Sbjct: 672 PGANDYVKEVQAELRKHRLHADIDISGNTMQKKIRTAQLALYNFIMVVGAEEQQARAVNW 731

Query: 622 RRFGSTTTQK----VSLLDAIPILTK 643
           R      TQ+    V L +A+  L +
Sbjct: 732 RNRDDQETQQRGVIVPLDEAVKKLVE 757


>gi|75812508|ref|YP_320127.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Anabaena
           variabilis ATCC 29413]
 gi|75705264|gb|ABA24938.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Anabaena
           variabilis ATCC 29413]
          Length = 614

 Score =  564 bits (1452), Expect = e-158,   Method: Composition-based stats.
 Identities = 261/608 (42%), Positives = 372/608 (61%), Gaps = 35/608 (5%)

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           E ++  D   L  IRH+CAHIMA AV+ ++P  +VA GP+ E+GFYYDFD     + D+L
Sbjct: 10  ENLSQHDSDKLLRIRHTCAHIMAMAVKKVFPGTKVATGPVTENGFYYDFDCPVSITPDDL 69

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG-- 177
           ++IE +M+ II  + P +++ +  E+ R       E+YK+EIL+ IP  E +T Y  G  
Sbjct: 70  SKIEDQMRRIIKANLPIIREEVQREEIRTEIAQLNESYKLEILDRIPEGETITRYFIGSP 129

Query: 178 -------------------EWFDLCRGPHVRSTGQVKK-FFKLMKVAGAYWRGDSNRPML 217
                               W+DLC GPH+  TG+++   FKL+ +AGAYW+GD  +  L
Sbjct: 130 DTGKPESSLFITDIQPASNYWWDLCAGPHINFTGEIEPDAFKLLNIAGAYWQGDETKAQL 189

Query: 218 SRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIF 276
            RIYG AW T+++L  YL   EE+ +RDHRKL +E++LF I ED G G++FWH KG  I 
Sbjct: 190 QRIYGIAWETKEQLQAYLKQREEALRRDHRKLGQELNLFSIQEDAGGGLVFWHPKGAIIR 249

Query: 277 QTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFA 335
             +  Y R+  ++  Y+ + TP + +  LW+ SGH+D Y+ NMF     ++     + + 
Sbjct: 250 YIIEDYWRKSHLESGYQLLYTPHIANLDLWKTSGHFDFYQENMFDSMDVEN-----QAYQ 304

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC 395
           +KPMNCP HV  + H L SYRELP+R AE G+VYR E SG+LHGLMRVRGFTQDDAHVFC
Sbjct: 305 IKPMNCPFHVLTYKHQLHSYRELPLRWAELGTVYRYERSGALHGLMRVRGFTQDDAHVFC 364

Query: 396 TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTI 455
              Q+ +E L + NL   I  DFGF+   V LSTRPEK VG+D +W+ A + ++  L+T 
Sbjct: 365 LPNQIADEILGVLNLTEQILSDFGFKNYEVNLSTRPEKSVGNDEVWELATSALRQALNT- 423

Query: 456 KNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS 515
                   N  V  G GAFYGPK +  ++DAIGR WQC TIQVDFNLP RF+  Y+    
Sbjct: 424 -----KGWNYIVDEGGGAFYGPKIDIKIQDAIGRLWQCSTIQVDFNLPERFDMEYIAVDG 478

Query: 516 EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLL 575
            +  P+MIHRA+FGS+ERF GI+IEN+ G+ PLWL+P+Q  +  ++    EYAQ +   L
Sbjct: 479 SRQRPIMIHRAIFGSLERFFGILIENYSGDFPLWLAPVQLRLLPVSDEVREYAQLVVISL 538

Query: 576 KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
           K   + +ETD   E +  +IR   ++KIP++ + G KE   +++ +R   S     +++ 
Sbjct: 539 KKAGIRVETDSSGERLGKQIRTAELEKIPVVAVVGKKEVENQNLSVRTRQSGDLGVLNMD 598

Query: 636 DAIPILTK 643
           + +  L  
Sbjct: 599 EILHRLQD 606


>gi|293400866|ref|ZP_06645011.1| threonine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291305892|gb|EFE47136.1| threonine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 577

 Score =  564 bits (1452), Expect = e-158,   Method: Composition-based stats.
 Identities = 232/587 (39%), Positives = 364/587 (62%), Gaps = 19/587 (3%)

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDEL 119
           +I   +   L+++ HSCAH+MA+AV+ ++P+ +  +GP+I DGFYYD D  +     ++L
Sbjct: 1   MIDIRENEQLSMLNHSCAHMMAQAVKRLYPQAKFWVGPVISDGFYYDIDLGDDVIKDEDL 60

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IEK+M++I       +++ +S E+A E+     + YK+++++ +     +T Y+QGE+
Sbjct: 61  PKIEKEMKKIAKDGKRIVRKEISKEEALEM--FADDPYKIDLIQDL-EDGTITCYQQGEF 117

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV  T ++ K FKL+K +GAYW+GD+   ML RIYG  + T++EL ++L+ LE
Sbjct: 118 IDLCRGPHVE-TVKLLKNFKLLKHSGAYWKGDAENKMLQRIYGVCYPTKEELEEHLHMLE 176

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E++KRDH+KL REM LF ++E   G+ F+   G  I   L ++   +  K++Y+ I TP 
Sbjct: 177 EAKKRDHKKLGREMGLFMMSEYAPGMPFFLPNGMIIRNLLENFWYEEHTKENYKFIKTPI 236

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++ + LW+ SGHW +Y+ NM+          D R FA+KPMNCPG + VF +GL SY++L
Sbjct: 237 MMSKELWEVSGHWANYKENMYTTMV------DDREFAIKPMNCPGSLLVFKNGLHSYKDL 290

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+ E G V+R+E SG+L+GL RVR FTQDDAH+F   +Q+ +E  ++ N I  +Y  F
Sbjct: 291 PLRMGELGQVHRHEASGALNGLFRVRTFTQDDAHIFMRPDQIESEVKELINFIDRVYSIF 350

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           G    +   +   +K +G  A+W+ +E  +     +         +  V  G+GAFYGPK
Sbjct: 351 GLSYRIELSTRPEKKYIGDLAIWEKSEKALADACVSAGK------DYKVNPGDGAFYGPK 404

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++ +KD++GR+WQCGTIQ+D NLP RF+  YV     K  PVM+HR +FGSIERFIGI+
Sbjct: 405 LDFHIKDSLGREWQCGTIQLDMNLPERFDLTYVEKDGTKVRPVMLHRVIFGSIERFIGIL 464

Query: 539 IENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           IE++ G+ P WL+P Q +V  +      + A  I   L +     ++D RNE + Y+IRE
Sbjct: 465 IEHYAGHFPTWLAPTQVMVVPVHYERHAQAANAINEKLLAMGFRSKSDARNEKLGYRIRE 524

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
             + KIP  ++ GD E    ++ +RR  S  +  + + + I  L+ E
Sbjct: 525 AQLAKIPYQLVIGDGEVEANTVTVRRAQSKESVTMPVEEFIAKLSAE 571


>gi|22325483|ref|NP_671778.1| EMB2761 (EMBRYO DEFECTIVE 2761); ATP binding / aminoacyl-tRNA
           ligase/ ligase, forming aminoacyl-tRNA and related
           compounds / nucleotide binding / threonine-tRNA ligase
           [Arabidopsis thaliana]
 gi|330250779|gb|AEC05873.1| putative threonyl-tRNA synthetase, putative / threonine--tRNA
           ligase [Arabidopsis thaliana]
          Length = 650

 Score =  563 bits (1451), Expect = e-158,   Method: Composition-based stats.
 Identities = 266/628 (42%), Positives = 389/628 (61%), Gaps = 36/628 (5%)

Query: 21  ATGSDVAES--ISRSLAKKAVAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCA 78
           +T   VA    IS S  KKA                   ++ + + E    L  IRH+CA
Sbjct: 44  STVFAVATEPAISSSGPKKA----------------EPSTVVLPSNESSDKLLKIRHTCA 87

Query: 79  HIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLK 138
           H+MA AVQ ++P+ +V IGP I++GFYYDFD E P +  +L +I+K+M  II+R+ P L+
Sbjct: 88  HVMAMAVQKLFPDAKVTIGPWIDNGFYYDFDME-PLTDKDLKRIKKEMDRIISRNLPLLR 146

Query: 139 QYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG-EWFDLCRGPHVRSTGQV-KK 196
           + +S E+A++   +  E YK+EIL+ I   E +T+Y  G EW+DLC GPHV +TG++ KK
Sbjct: 147 EEVSREEAKKRIMAINEPYKMEILDGIKE-EPITVYHIGNEWWDLCAGPHVETTGKINKK 205

Query: 197 FFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLF 256
             +L  VAGAYWRGD  R ML RIYGTAW ++++L  YL+F EE+++RDHR++ +++DLF
Sbjct: 206 AVELESVAGAYWRGDEKRQMLQRIYGTAWESEEQLKAYLHFKEEAKRRDHRRIGQDLDLF 265

Query: 257 HIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSY 314
            I ++ G G++FWH KG  +   +    ++  ++  Y+ I TP V    LW+ SGH D Y
Sbjct: 266 SIQDEAGGGLVFWHPKGAIVRNIIEESWKKMHVEHGYDLIYTPHVAKADLWKISGHLDFY 325

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
           R NM+     +D +     + L+PMNCP H+ ++    +SYR+LP+R+AE G+VYR E S
Sbjct: 326 RENMYDQMEIEDEL-----YQLRPMNCPYHILLYQRKRQSYRDLPIRVAELGTVYRYELS 380

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
           GSLHGL RVRGFTQDDAH+FC ++Q+ +E   + +L   I   FGF K  V LSTRPEK 
Sbjct: 381 GSLHGLFRVRGFTQDDAHIFCLEDQIKDEIRGVLDLTEEILSRFGFNKYEVNLSTRPEKS 440

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           VG D +W+ A   ++  LD    S        V  G GAFYGPK +  ++DA+GR WQC 
Sbjct: 441 VGGDDIWEKATCALRDALDDKGWS------YEVDEGGGAFYGPKIDLKIEDALGRKWQCS 494

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQ 554
           TIQVDFNLP RF+  YV+++S+K  P+MIHRAV GS+ERF G++IE++ G+ PLWLSP+Q
Sbjct: 495 TIQVDFNLPQRFDITYVDTNSDKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPVQ 554

Query: 555 AIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
             V  +T + +E+ +E++  L++  +  E     E +   IR    +KIP++ + G KE 
Sbjct: 555 VRVLPVTDNQLEFCKEVSKKLRACGVRAEL-CHGERLPKLIRNAETQKIPLMAVVGPKEV 613

Query: 615 SERSIGIRRFGSTTTQKVSLLDAIPILT 642
              ++ +R         + + D I  + 
Sbjct: 614 ETGTVTVRSRFGGELGTIPVDDLINKIN 641


>gi|296129629|ref|YP_003636879.1| threonyl-tRNA synthetase [Cellulomonas flavigena DSM 20109]
 gi|296021444|gb|ADG74680.1| threonyl-tRNA synthetase [Cellulomonas flavigena DSM 20109]
          Length = 670

 Score =  563 bits (1451), Expect = e-158,   Method: Composition-based stats.
 Identities = 253/675 (37%), Positives = 368/675 (54%), Gaps = 47/675 (6%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
           MP  I LT  DG   +     TG+++       +  +       G++ DL+ P+  G+ +
Sbjct: 1   MPEQITLTV-DGVETSVAQGTTGTELFADRRDVVVVRVD-----GELTDLAAPLAAGTTV 54

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           E +T + P  LAV+RHS AH++A+AVQ I P+ ++ IGP I DGFYYDFD E PF+ ++L
Sbjct: 55  EAVTIDSPDGLAVLRHSAAHVLAQAVQEINPKARLGIGPPITDGFYYDFDVETPFTPEDL 114

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL----ESIPAKENVTLYR 175
             IEK M  I+     F +  ++  +ARE  E   E YK+E++    E+           
Sbjct: 115 TAIEKVMGRIVKEGQTFRRWEVTEAQARE--ELAAEPYKLELIGLKGEAGDTDGASVEVG 172

Query: 176 QGE------------------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPML 217
            G                   W DLCRGPH+ ST  +   F+L + A AYWRG    P L
Sbjct: 173 LGGLSIYQNVRGAGRESEAVVWQDLCRGPHLPSTRLIGNGFQLTRSAAAYWRGSEKNPQL 232

Query: 218 SRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIF 276
            R+YGTAW T+ EL  YL  + E+E+RDHRKL  E+DLF   E+ GSG+  +H KG  I 
Sbjct: 233 QRVYGTAWPTKDELKAYLERIAEAERRDHRKLGNELDLFSFPEEIGSGLAVFHPKGGIIR 292

Query: 277 QTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT-------I 328
             +  Y RR  ++  Y  +N+P +  + L+Q SGH D Y   M+     D+         
Sbjct: 293 MEMEEYSRRRHVQAGYSFVNSPHITKEQLFQISGHLDWYADGMYPPMQLDEERDAEGHVK 352

Query: 329 KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQ 388
           +  + + LKPMNCP H  +F    +SYRELP+RL EFG+VYR E SG +HG+ R RGFTQ
Sbjct: 353 RQGQNYYLKPMNCPMHNLIFAARGRSYRELPLRLFEFGTVYRYEKSGVVHGMTRARGFTQ 412

Query: 389 DDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR-VGSDALWDDAENI 447
           DDAH++CT+EQM +E   +   ++ + KD+G +   ++LSTR  ++ VGSD +WD+A   
Sbjct: 413 DDAHIYCTREQMKDELTSLLTFVLDLLKDYGLDDFYLELSTRNPEKSVGSDDVWDEATET 472

Query: 448 MKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFN 507
           ++ V +         +      G  AFYGPK     KDAIGR WQ  TIQ+DFNLP RF 
Sbjct: 473 LREVAEASG------LELVPDPGGAAFYGPKISVQAKDAIGRTWQMSTIQLDFNLPERFE 526

Query: 508 AFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEY 567
             Y      +  PVMIHRA+FGSIERF  ++ E++ G  P WL+P+Q +   +      Y
Sbjct: 527 LEYTAPDGTRQRPVMIHRALFGSIERFFAVLTEHYAGAFPAWLAPVQVLAVPVAEPFEPY 586

Query: 568 AQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGST 627
            Q++ + L++  +  E D  ++    KIR  S +KIP ++I G ++A   ++  R     
Sbjct: 587 LQQVVDRLRAQGVRAEVDRSDDRFGKKIRNASTQKIPFVLIAGGEDADAGAVSFRYRDGR 646

Query: 628 TTQKVSLLDAIPILT 642
               V + +A+  + 
Sbjct: 647 QDNGVPVDEAVERIV 661


>gi|56751513|ref|YP_172214.1| threonyl-tRNA synthetase [Synechococcus elongatus PCC 6301]
 gi|73919835|sp|Q5N1X6|SYT_SYNP6 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|56686472|dbj|BAD79694.1| threonyl-tRNA synthetase [Synechococcus elongatus PCC 6301]
          Length = 607

 Score =  563 bits (1451), Expect = e-158,   Method: Composition-based stats.
 Identities = 247/601 (41%), Positives = 375/601 (62%), Gaps = 19/601 (3%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSD 117
           +I++    +   L  IRH+ +H+MA AVQ ++P+ QV IGP  E GFYYDFD  +PF+  
Sbjct: 13  AIQLPKTSESAQLKRIRHTMSHVMAMAVQKLFPKAQVTIGPWTETGFYYDFDTPEPFTEA 72

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +L  I+K+M +II +  P +++ +S E+A++  E+  E YK+EIL+ +   E +TLY  G
Sbjct: 73  DLKAIKKEMVKIIQQKLPVVREEVSREEAQQRIEALGEPYKLEILQGL--TEPITLYHLG 130

Query: 178 E-WFDLCRGPHVRSTGQVKK-FFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
           + W+DLC GPHV +T ++    F L  VAGAYWRGD  +  L RIYGTAW T ++LT+Y 
Sbjct: 131 DRWWDLCAGPHVETTAELNPKAFDLESVAGAYWRGDETKAQLQRIYGTAWETPEQLTEYK 190

Query: 236 YFLEESEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEE 293
              EE+ KRDHRKL RE+ LF      G G+  W  KG  +  TL  ++ + ++K  Y+ 
Sbjct: 191 RRKEEALKRDHRKLGRELGLFLFADPVGPGLPLWTPKGTILRSTLEDFLKQEQMKRGYQS 250

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT-FALKPMNCPGHVAVFNHGL 352
           + TP +    L++ SGHW +YR +MF +   DD  + L   F LKPMNCP H+ ++ + L
Sbjct: 251 VVTPHLARVDLFKVSGHWQNYREDMFPMMAEDDEARGLEQGFVLKPMNCPFHIQIYKNEL 310

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
           +SYRELP+RLAEFG+VYR E SG L GL RVRGFT DD+H+F   +Q+ +E L + +LI+
Sbjct: 311 RSYRELPIRLAEFGTVYRYEQSGELGGLTRVRGFTVDDSHLFVRPDQLASEFLSVVDLIL 370

Query: 413 SIYKDFGFEKIMVKLSTRPEK---RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL 469
           S++K    +K   +LS R  +    +GSD +W+ AE+ ++   +T+       ++  + +
Sbjct: 371 SVFKALNLKKFKARLSFRDPESDKYIGSDDVWEKAESAIQAAAETLG------MDYFIGV 424

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG 529
           GE AFYGPK ++I +DA+ R+WQ GT+QVD+NLP RF+  YV     +  PVMIHRA FG
Sbjct: 425 GEAAFYGPKLDFIFQDALDREWQLGTVQVDYNLPERFDLEYVAEDGSRQRPVMIHRAPFG 484

Query: 530 SIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE 589
           S+ER IGI+IE + G+ PLWL+P Q  +  +T + ++Y Q++A+ L++  + ++ D   +
Sbjct: 485 SLERLIGILIEEYAGDFPLWLAPEQIRLLPVTETVLDYCQQVADQLRAIGVRVQVDCSGD 544

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT---KESL 646
            +   IR     KIP++ + G +EA   ++ IR   +     +++ D    L+    E L
Sbjct: 545 RLGKLIRNAEKAKIPVMAVIGAQEAESETLSIRTRATGDLGSLTVADLTKRLSSAIAEKL 604

Query: 647 P 647
           P
Sbjct: 605 P 605


>gi|81301415|ref|YP_401623.1| threonyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
 gi|123769177|sp|Q31JY3|SYT_SYNE7 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|81170296|gb|ABB58636.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Synechococcus
           elongatus PCC 7942]
          Length = 604

 Score =  563 bits (1451), Expect = e-158,   Method: Composition-based stats.
 Identities = 247/601 (41%), Positives = 375/601 (62%), Gaps = 19/601 (3%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSD 117
           +I++    +   L  IRH+ +H+MA AVQ ++P+ QV IGP  E GFYYDFD  +PF+  
Sbjct: 10  AIQLPKTSESAQLKRIRHTMSHVMAMAVQKLFPKAQVTIGPWTETGFYYDFDTPEPFTEA 69

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +L  I+K+M +II +  P +++ +S E+A++  E+  E YK+EIL+ +   E +TLY  G
Sbjct: 70  DLKAIKKEMVKIIQQKLPVVREEVSREEAQQRIEALGEPYKLEILQGL--TEPITLYHLG 127

Query: 178 E-WFDLCRGPHVRSTGQVKK-FFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
           + W+DLC GPHV +T ++    F L  VAGAYWRGD  +  L RIYGTAW T ++LT+Y 
Sbjct: 128 DRWWDLCAGPHVETTAELNPKAFDLESVAGAYWRGDETKAQLQRIYGTAWETPEQLTEYK 187

Query: 236 YFLEESEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEE 293
              EE+ KRDHRKL RE+ LF      G G+  W  KG  +  TL  ++ + ++K  Y+ 
Sbjct: 188 RRKEEALKRDHRKLGRELGLFLFADPVGPGLPLWTPKGTILRSTLEDFLKQEQMKRGYQS 247

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT-FALKPMNCPGHVAVFNHGL 352
           + TP +    L++ SGHW +YR +MF +   DD  + L   F LKPMNCP H+ ++ + L
Sbjct: 248 VVTPHLARVDLFKVSGHWQNYREDMFPMMAEDDEARGLEQGFVLKPMNCPFHIQIYKNEL 307

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
           +SYRELP+RLAEFG+VYR E SG L GL RVRGFT DD+H+F   +Q+ +E L + +LI+
Sbjct: 308 RSYRELPIRLAEFGTVYRYEQSGELGGLTRVRGFTVDDSHLFVRPDQLASEFLSVVDLIL 367

Query: 413 SIYKDFGFEKIMVKLSTRPEK---RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL 469
           S++K    +K   +LS R  +    +GSD +W+ AE+ ++   +T+       ++  + +
Sbjct: 368 SVFKALNLKKFKARLSFRDPESDKYIGSDDVWEKAESAIQAAAETLG------MDYFIGV 421

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG 529
           GE AFYGPK ++I +DA+ R+WQ GT+QVD+NLP RF+  YV     +  PVMIHRA FG
Sbjct: 422 GEAAFYGPKLDFIFQDALDREWQLGTVQVDYNLPERFDLEYVAEDGSRQRPVMIHRAPFG 481

Query: 530 SIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE 589
           S+ER IGI+IE + G+ PLWL+P Q  +  +T + ++Y Q++A+ L++  + ++ D   +
Sbjct: 482 SLERLIGILIEEYAGDFPLWLAPEQIRLLPVTETVLDYCQQVADQLRAIGVRVQVDCSGD 541

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT---KESL 646
            +   IR     KIP++ + G +EA   ++ IR   +     +++ D    L+    E L
Sbjct: 542 RLGKLIRNAEKAKIPVMAVIGAQEAESETLSIRTRATGDLGSLTVADLTKRLSSAIAEKL 601

Query: 647 P 647
           P
Sbjct: 602 P 602


>gi|297835784|ref|XP_002885774.1| hypothetical protein ARALYDRAFT_319286 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297331614|gb|EFH62033.1| hypothetical protein ARALYDRAFT_319286 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 650

 Score =  563 bits (1450), Expect = e-158,   Method: Composition-based stats.
 Identities = 260/592 (43%), Positives = 379/592 (64%), Gaps = 18/592 (3%)

Query: 55  REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPF 114
              ++ + + E    L  IRH+CAH+MA AVQ ++P+ +V IGP I++GFYYDFD E P 
Sbjct: 64  EPSTVVLPSNESSDKLLKIRHTCAHVMAMAVQKLFPDAKVTIGPWIDNGFYYDFDME-PL 122

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
           +  +L +I+K+M  II+R+ P L++ +S E+A+E   +  E YK+EILE I   E +T+Y
Sbjct: 123 TDKDLKRIKKEMDRIISRNLPLLREEVSREEAKERIMAINEPYKMEILEGIKE-EPITVY 181

Query: 175 RQG-EWFDLCRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELT 232
             G EW+DLC GPHV +TG++ KK  +L  VAGAYWRGD  R ML RIYGTAW ++++L 
Sbjct: 182 HIGNEWWDLCAGPHVETTGKINKKAVELESVAGAYWRGDEKRQMLQRIYGTAWESEEQLK 241

Query: 233 QYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDD 290
            YL+F EE+++RDHR++ +++DLF I ++ G G++FWH KG  +   +    ++  ++  
Sbjct: 242 AYLHFKEEAKRRDHRRIGQDLDLFSIQDEAGGGLVFWHPKGAIVRNIIEESWKKMHVEHG 301

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH 350
           Y+ I TP V    LW+ SGH D YR NM+     +D +     + L+PMNCP H+ ++  
Sbjct: 302 YDLIYTPHVAKADLWKISGHLDFYRENMYDQMEIEDEL-----YQLRPMNCPYHILLYQR 356

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
             +SYR+LP+R+AE G+VYR E SGSLHGL RVRGFTQDDAH+FC ++Q+ +E   + +L
Sbjct: 357 KRQSYRDLPIRVAELGTVYRYELSGSLHGLFRVRGFTQDDAHIFCLEDQIKDEIRGVLDL 416

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
              I   FGF K  V LSTRPEK VG D +W+ A   ++  LD    S        V  G
Sbjct: 417 TEEILSRFGFNKYEVNLSTRPEKSVGDDDIWEKATCALRDALDDKGWS------YEVDEG 470

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
            GAFYGPK +  ++DA+GR WQC TIQVDFNLP RF+  YV+++S+K  P+MIHRAV GS
Sbjct: 471 GGAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDITYVDTNSDKKRPIMIHRAVLGS 530

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
           +ERF G++IE++ G+ PLWLSPIQ  V  +T + +E+ +E++  L++  +  E     E 
Sbjct: 531 LERFFGVLIEHYAGDFPLWLSPIQVRVLPVTDNQLEFCKEVSKKLRACGVRAEL-CHGER 589

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +   IR    +KIP++ + G KE    ++ +R         + + D I  + 
Sbjct: 590 LPKLIRNAETQKIPLMAVVGPKEVETGTVTVRSRFGGELGTIPVDDFINKIN 641


>gi|325473136|gb|EGC76332.1| threonyl-tRNA synthetase [Treponema denticola F0402]
          Length = 585

 Score =  563 bits (1450), Expect = e-158,   Method: Composition-based stats.
 Identities = 283/580 (48%), Positives = 395/580 (68%), Gaps = 21/580 (3%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           L  +RHS AH+MAEAV +++P  +VAIGP I+ GFYYDF+  +P ++D+L  IEK+M++I
Sbjct: 11  LGTLRHSTAHVMAEAVVNLFPGTKVAIGPAIDYGFYYDFELPRPINNDDLPAIEKEMRKI 70

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
           +   S F K+ +S EKA E+F+   + +K+E+++ +PA E +++Y+ GE+ DLCRGPHV 
Sbjct: 71  LTTRSNFEKEVISREKALEMFK--DQPFKIELIKDLPADEEISIYKSGEFTDLCRGPHVC 128

Query: 190 STGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRK 248
           S   +  + FKLMK+AGAYWRGD  RPML+RIYGTAW    +L +YL  LEE+EKRDHRK
Sbjct: 129 SMADINAQGFKLMKIAGAYWRGDETRPMLTRIYGTAWEKPNDLKEYLAMLEEAEKRDHRK 188

Query: 249 LAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQ 307
           + + M+LFHI E+  G +FWH KGW ++ T+ +Y+R++IK+  Y E++TP V+ + LW++
Sbjct: 189 VGKAMNLFHIDEENPGQVFWHPKGWTLYLTIQNYVRKRIKEDGYLEVHTPFVMPRSLWER 248

Query: 308 SGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGS 367
           SGHW  Y+ NMF       T  + R FALKPMNCPGHV +F  G+KSY++LP+RLAEFGS
Sbjct: 249 SGHWAKYKENMFI------TESEKRLFALKPMNCPGHVEIFKQGIKSYKDLPLRLAEFGS 302

Query: 368 VYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF--EKIMV 425
             RNEPSGSLHG+MR+RGF QDDAH+FCT+EQ+ +E  K   L+  +Y DFGF  +KI+V
Sbjct: 303 CTRNEPSGSLHGIMRIRGFVQDDAHIFCTEEQISSEVSKFCALLKRMYADFGFAEDKILV 362

Query: 426 KLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKD 485
           K STRPE+RVG DA WD AE  +              +   +  GEGAFYGPK E+ L D
Sbjct: 363 KFSTRPEQRVGDDATWDRAEKALSDACADAG------LKYEIAEGEGAFYGPKLEFTLID 416

Query: 486 AIGRDWQCGTIQVDFNLP--SRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           A+GR+WQCGTIQ+D+ LP   R NA Y+   + K HPVM+HRAV GS+ERFIGI+IEN  
Sbjct: 417 ALGREWQCGTIQLDYQLPSAERLNAEYIGDDNNKHHPVMLHRAVLGSLERFIGILIENCA 476

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G +P WL+P+QA++  +  +  EYAQ++  +L      +  D   + +N KIR+H  +K+
Sbjct: 477 GIMPPWLAPVQAVIVPVAPAFNEYAQKVQKVLDEKGFRVIADIGTDRMNAKIRKHQEEKV 536

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              +I G  E    S+ +R       + ++L + I  L  
Sbjct: 537 IYQLIVGQSEMDNNSVAVRMRKGG-QKVMTLDEFISFLKD 575


>gi|169617674|ref|XP_001802251.1| hypothetical protein SNOG_12019 [Phaeosphaeria nodorum SN15]
 gi|111059311|gb|EAT80431.1| hypothetical protein SNOG_12019 [Phaeosphaeria nodorum SN15]
          Length = 779

 Score =  562 bits (1449), Expect = e-158,   Method: Composition-based stats.
 Identities = 236/699 (33%), Positives = 362/699 (51%), Gaps = 71/699 (10%)

Query: 3   SDIKLTFPDGSIKNF-PVHATGSDVAESISRSLAKKAVAVAIN-----GKVCDLSDPVRE 56
            +I ++  DG I        + +D+A  IS+SL ++ V   ++       + DL  P+ +
Sbjct: 83  ENINISLGDGKIIEGKSWETSPADIARGISKSLFERTVIARLDKGTPEETLWDLERPLEK 142

Query: 57  -GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFS 115
              +E++  +DP    V  HS AHI+ EA +  +    + IGP +EDGFYY+    +  +
Sbjct: 143 SCKLELLPFDDPEGKKVFWHSSAHILGEASERRF-GCDLCIGPPVEDGFYYEMALPEKAA 201

Query: 116 SD--ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES-IPAKENVT 172
            +  +   +E  +  I+     F +  LS E   E+F+S    YK  I++  I    + T
Sbjct: 202 VEQADYKPLETIVNNIVKEKQVFQRLVLSKEDLLEMFKS--NPYKQHIIKDKIADGTSTT 259

Query: 173 LYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELT 232
           +YR G   DLCRGPHV  TG++K+F K+MK + +Y+ GD+N   L RIYG ++  +  + 
Sbjct: 260 VYRNGPLIDLCRGPHVPHTGRIKQF-KVMKNSASYFLGDANNDSLQRIYGVSFPDKDAMQ 318

Query: 233 QYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDY 291
            +L FLEE+ KRDHRK+ +E +LF   E   G  F+   G  IF TL +++R +     Y
Sbjct: 319 AHLKFLEEAAKRDHRKIGKEQELFFFHEASPGSPFFLPHGQIIFNTLQAFLREEYWNRGY 378

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           +E+ +P +    LW+ SGHW  Y  +MF          +   + LKPMNCPGH  +F H 
Sbjct: 379 QEVQSPNMYSSALWKVSGHWQHYHEDMFTFDV------EKEKWGLKPMNCPGHALIFKHR 432

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI 411
            +SYRELP+R+A+FG ++RNE SG+L GL RVR F QDD H+FCT++Q+  E   + + +
Sbjct: 433 ERSYRELPIRMADFGVLHRNEASGALTGLTRVRRFQQDDTHIFCTQDQITEEIFGLFDFL 492

Query: 412 ISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
            ++Y  FGF   + KLSTRP+  +G    W+ AE  +   L+        +    +  G+
Sbjct: 493 RAVYGKFGFTFKL-KLSTRPDGFLGEVETWNKAEAKLTEALNQFTAEGGGQ--WELNPGD 549

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC------------- 518
           GAFYGPK +  + DA+ R++QC TIQ+DF LP++F   Y+ S                  
Sbjct: 550 GAFYGPKIDITISDALKREFQCATIQLDFQLPNQFELEYMTSEVAAAKPKEEKAKEEPAP 609

Query: 519 ------------------------------HPVMIHRAVFGSIERFIGIMIENFKGNLPL 548
                                          PVMIHRA++GS ERFI I+ E+F G  P 
Sbjct: 610 KDAPAPVEQKKEAADPNAPKKIQPPQPGYARPVMIHRAIYGSFERFIAIITEHFAGRWPF 669

Query: 549 WLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIII 608
           WLSP Q +V  +  SA +Y +E+  +L+ +    + D    T+  KIR   +     I++
Sbjct: 670 WLSPRQVMVIPVMPSANDYVKEVQAVLRKNKFHADIDVSGNTMQKKIRTAQLSLYNFIMV 729

Query: 609 CGDKEASERSIGIRRFGSTTTQK----VSLLDAIPILTK 643
            G +E   R++  R      TQ+    V L +A+  L K
Sbjct: 730 VGAEEQKARAVNWRNRDDQATQQRGEIVPLDEAVEKLCK 768


>gi|139437031|ref|ZP_01771191.1| Hypothetical protein COLAER_00165 [Collinsella aerofaciens ATCC
           25986]
 gi|133776678|gb|EBA40498.1| Hypothetical protein COLAER_00165 [Collinsella aerofaciens ATCC
           25986]
          Length = 611

 Score =  562 bits (1449), Expect = e-158,   Method: Composition-based stats.
 Identities = 243/604 (40%), Positives = 369/604 (61%), Gaps = 21/604 (3%)

Query: 45  GKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGF 104
           G+   +     +GS+  +  +      VIRHS AHIMA+A++ ++P+   A GP  ++GF
Sbjct: 20  GENIPMKALYNDGSVAELPQD--EVTHVIRHSAAHIMAQAIKRLYPQADFAYGPATDNGF 77

Query: 105 YYDFDKEQ--PFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL 162
           YYD D  +    S D+   IE +M++I+  +  F        +A  L E + E YKVE +
Sbjct: 78  YYDVDLPEGVKISEDDFPAIEAEMKKIVKENLKFSVYEKPRAEAIALMEERGEKYKVEHI 137

Query: 163 ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYG 222
             +     +T Y+QG++ D+C GPH+  T  +K F KL  V+GAYW+GD +  ML+RI G
Sbjct: 138 GDLDDDARITFYQQGDYIDMCVGPHICYTKALKAF-KLTGVSGAYWKGDKDNKMLTRING 196

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISY 282
            A+ T++EL ++++ LEE++KRDHRK+ REMDLF + ++  G  F+   G  +  TL+ Y
Sbjct: 197 VAFATKEELDEHMHMLEEAKKRDHRKIGREMDLFMMRDEAPGFPFFLPNGMILKNTLLDY 256

Query: 283 MRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
            R    K  Y EI+TP ++++ LW+ SGHWD Y+ NM+       T+ D   + +KPMNC
Sbjct: 257 WREIHHKAGYVEISTPLIMNKQLWKTSGHWDHYKDNMY------STVIDDEEYCIKPMNC 310

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
           PG V V+     SYRELP+R  E G V+R+E  G+LHGL RVR F QDDAH+F   +Q+ 
Sbjct: 311 PGGVLVYASKPHSYRELPIRAGEIGLVHRHELRGALHGLFRVRCFNQDDAHLFVRPDQLT 370

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
           +E + + NLI S+Y+ FGF+   V+LSTRPE  +GSD  W  AE  ++  L+ +      
Sbjct: 371 DEIVGVVNLIDSVYQKFGFKYH-VELSTRPEDSMGSDEDWARAEEGLRTALEQLH----- 424

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
            ++  V  G+GAFYGPK ++ L+D++GR WQCGT+Q+DF +P  F+  YV++   K  P+
Sbjct: 425 -MDYEVNEGDGAFYGPKIDFHLEDSLGRTWQCGTVQLDFQMPLNFDLEYVDADGTKKRPI 483

Query: 522 MIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLS 581
           M+HR  FGSIERFIGI+IE+F G  P WL+P+Q     ++  + +YA E+   L+   + 
Sbjct: 484 MLHRVCFGSIERFIGILIEHFAGKFPTWLAPVQVKALPVSEKSRDYAHEVCAKLEEAGIR 543

Query: 582 IETDFRNETINYKIREHS-IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
           +  D R+E I YKIRE   I ++P ++I G+KE    +I +R   + T Q +S+ + +  
Sbjct: 544 VVCDDRDEKIGYKIREARSIDRVPYMLILGEKEVEAGNISVRDRSNETVQ-MSVDEFVAK 602

Query: 641 LTKE 644
           + +E
Sbjct: 603 VLEE 606


>gi|21220031|ref|NP_625810.1| threonyl-tRNA synthetase [Streptomyces coelicolor A3(2)]
 gi|289772757|ref|ZP_06532135.1| threonyl-tRNA synthetase [Streptomyces lividans TK24]
 gi|22654145|sp|Q9L278|SYT_STRCO RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|6822227|emb|CAB70933.1| threonine-tRNA synthetase [Streptomyces coelicolor A3(2)]
 gi|289702956|gb|EFD70385.1| threonyl-tRNA synthetase [Streptomyces lividans TK24]
          Length = 658

 Score =  562 bits (1448), Expect = e-158,   Method: Composition-based stats.
 Identities = 260/664 (39%), Positives = 381/664 (57%), Gaps = 38/664 (5%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           SD+++     S +   V  TG+  AE  +    +  +A  ++G + DL+  V++G ++E 
Sbjct: 2   SDVRVIIQRDSEREERVVTTGTTAAELFAGE--RSIIAARVSGDLKDLAYEVKDGETVEA 59

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +       L ++RHS AH+MA+AVQ ++PE ++ IGP ++DGFYYDFD E+PF  D+L  
Sbjct: 60  VEISSEDGLDILRHSTAHVMAQAVQELFPEAKLGIGPPVKDGFYYDFDVEKPFHPDDLKA 119

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL------------ESIPAKE 169
           IEKKMQEI  R   F ++ ++ E ARE  E   E YK+E++            +      
Sbjct: 120 IEKKMQEIQKRGQRFSRRVVTDEAARE--ELADEPYKLELIGLKGSASSDDGADVEVGAG 177

Query: 170 NVTLYRQGE-------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYG 222
            +T+Y   +       W DLCRGPH+ +T  +  F KLM+ A AYWRG    PML RIYG
Sbjct: 178 ELTIYDNLDAKTGELCWKDLCRGPHLPTTRNIPAF-KLMRNAAAYWRGSEKNPMLQRIYG 236

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLIS 281
           TAW T+ EL  +L FL E+EKRDHRKL  E+DLF I  + GSG+  +H KG  I + +  
Sbjct: 237 TAWPTKDELKAHLEFLAEAEKRDHRKLGSELDLFSIPEQIGSGLAVFHPKGGIIRRVMED 296

Query: 282 YMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
           Y RR   ++ YE + TP      L++ SGH D Y   M+     D    +   + LKPMN
Sbjct: 297 YSRRRHEEEGYEFVYTPHATKGKLFETSGHLDWYADGMYPPMQLD----EGVDYYLKPMN 352

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
           CP H  +F+   +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDDAH++CT+EQM
Sbjct: 353 CPMHNLIFDARGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYCTREQM 412

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDTIKNSS 459
             E  K    ++++ +D+G     ++LST+  +  VGSD  W++A   ++ V +      
Sbjct: 413 SEELDKTLTFVLNLLRDYGLNDFYLELSTKDPEKFVGSDEAWEEATETLRQVAE------ 466

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
           +  +      G  AFYGPK     +DAIGR WQ  TIQ+DFNLP RF+  Y  +   K  
Sbjct: 467 KQNLELVADPGGAAFYGPKISVQARDAIGRTWQMSTIQLDFNLPERFSLEYTAADGAKTR 526

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH 579
           PVMIHRA+FGSIERF  +++E++ G +P WL+P+QA+   +  + V+Y +E A   +   
Sbjct: 527 PVMIHRALFGSIERFFAVLLEHYAGAMPPWLAPVQAVGIPVGDAHVQYLEEFAAEARRKG 586

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
           L ++ D  ++ +  KIR    +K+P +II GD++    ++  R    +    +    A+ 
Sbjct: 587 LRVDVDASSDRMQKKIRTQQKQKVPFMIIVGDEDMHGGTVSFRYRDGSQENGIPRDQALA 646

Query: 640 ILTK 643
            L  
Sbjct: 647 KLVD 650


>gi|331701570|ref|YP_004398529.1| threonyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
 gi|329128913|gb|AEB73466.1| threonyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
          Length = 648

 Score =  562 bits (1448), Expect = e-158,   Method: Composition-based stats.
 Identities = 230/651 (35%), Positives = 369/651 (56%), Gaps = 22/651 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           S +   FPDGS+K F    T   +A+SI+ SL KKAVA  ++GK  +  +P+ +G  IEI
Sbjct: 2   SQLSFEFPDGSVKQFDDGVTSEAIAKSIAVSLGKKAVAAKVDGKWVNNDEPLHKGGKIEI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELA 120
           +T +    L+V+R + A I+  A+ + +  +        EDGF+ D DK +   S D+L+
Sbjct: 62  VTSDSDEGLSVLRATAAQILKMAIANDFDNIHFGESDADEDGFFVDTDKPDTQISVDQLS 121

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            +E  M +II +D P    +LS + A ++  +  + Y+ E++++      V  ++ G++ 
Sbjct: 122 ALEDSMHKIIKQDLPIKVVFLSADDAAKV--AGDDPYQKELVKANEVNGQVKFFQIGDFQ 179

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
            +  G  + STG+VK F KL+ VAGAYW+G S+ PML RIY TA+N Q++L   L   +E
Sbjct: 180 SIAEGAVLPSTGKVKIF-KLLSVAGAYWQGKSSNPMLQRIYATAFNKQKDLDADLEKRKE 238

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQ 298
           + +RDHR +  E+DLF +      G+ +W   G  I +T+  Y+  +++ + Y+ + TP 
Sbjct: 239 AHERDHRVIGNELDLFFVDPKVGAGLPYWMPNGATIRRTIERYIVDKEVANGYQHVYTPV 298

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           + +  L++QSGHWD YR +MF          D     L+PMNCP H+ ++NH ++SYREL
Sbjct: 299 LANLDLYKQSGHWDHYREDMFPPMDMG----DGEELELRPMNCPSHIQIYNHHIRSYREL 354

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE G ++R E SG+L GL RVR  T +D H F   +Q+  E   I NL++ +Y DF
Sbjct: 355 PLRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQIQEEFKNILNLMVEVYHDF 414

Query: 419 GFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
                  +LS R  K        D +W  A+ ++KG +D +       ++     GE AF
Sbjct: 415 DINDYTFRLSYRDPKNTEKYFDDDEMWTRAQTMLKGAMDEMG------LDYVEAEGEAAF 468

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +   K A+G +    TIQ+DF LP RF+  Y+    ++  PVMIHR +  ++ERF
Sbjct: 469 YGPKLDVQTKTALGNEETLSTIQLDFMLPERFDLHYIGEDGKQHRPVMIHRGLVSTMERF 528

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           +  + E +KG  P WL+P Q  +  ++    ++YA++I + L++  +    D R E + Y
Sbjct: 529 VAYLTEIYKGAFPTWLAPHQVKIIPVSQDKHLDYAKKINDQLRALKIRSSVDTRAEKMGY 588

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            IR+    KIP  ++ GD+E S  S+ +R++G   TQ  S+ D I  ++K+
Sbjct: 589 LIRDAQTHKIPYTLVVGDEEVSGNSVSVRKYGEQDTQSESVPDFIDEVSKD 639


>gi|42526600|ref|NP_971698.1| threonyl-tRNA synthetase [Treponema denticola ATCC 35405]
 gi|73919840|sp|Q73NR2|SYT_TREDE RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|41816793|gb|AAS11579.1| threonyl-tRNA synthetase [Treponema denticola ATCC 35405]
          Length = 585

 Score =  562 bits (1448), Expect = e-158,   Method: Composition-based stats.
 Identities = 283/580 (48%), Positives = 395/580 (68%), Gaps = 21/580 (3%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           L  +RHS AH+MAEAV +++P  +VAIGP I+ GFYYDF+  +P ++D+L  IEK+M++I
Sbjct: 11  LGTLRHSTAHVMAEAVVNLFPGTKVAIGPAIDYGFYYDFELPRPINNDDLPAIEKEMRKI 70

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
           +   S F K+ +S EKA E+F+   + +K+E+++ +PA E +++Y+ GE+ DLCRGPHV 
Sbjct: 71  LTTRSNFEKEVISREKALEMFK--DQPFKIELIKGLPADEEISIYKSGEFTDLCRGPHVC 128

Query: 190 STGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRK 248
           S   +  + FKLMK+AGAYWRGD  RPML+RIYGTAW    +L +YL  LEE+EKRDHR+
Sbjct: 129 SMADINAQGFKLMKIAGAYWRGDETRPMLTRIYGTAWEKPNDLKEYLAMLEEAEKRDHRR 188

Query: 249 LAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQ 307
           + + M+LFHI E+  G IFWH KGW ++ T+ +Y+R++IK+  Y E++TP V+ + LW++
Sbjct: 189 IGKAMNLFHIDEENPGQIFWHPKGWTLYLTIQNYVRKRIKEDGYLEVHTPFVMPRSLWER 248

Query: 308 SGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGS 367
           SGHW  Y+ NMF       T  + R FALKPMNCPGHV +F  G+KSY++LP+RLAEFGS
Sbjct: 249 SGHWAKYKENMFI------TESEKRLFALKPMNCPGHVEIFKQGIKSYKDLPLRLAEFGS 302

Query: 368 VYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF--EKIMV 425
             RNEPSGSLHG+MR+RGF QDDAH+FCT+EQ+ +E  K   L+  +Y DFGF  +KI+V
Sbjct: 303 CTRNEPSGSLHGIMRIRGFVQDDAHIFCTEEQISSEVSKFCALLKRMYADFGFAEDKILV 362

Query: 426 KLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKD 485
           K STRPE+RVG DA WD AE  +              +   +  GEGAFYGPK E+ L D
Sbjct: 363 KFSTRPEQRVGDDATWDRAEKALSDACADAG------LKYEIAEGEGAFYGPKLEFTLID 416

Query: 486 AIGRDWQCGTIQVDFNLP--SRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           A+GR+WQCGTIQ+D+ LP   R NA Y+   + K HPVM+HRAV GS+ERFIGI+IEN  
Sbjct: 417 ALGREWQCGTIQLDYQLPSAERLNAEYIGDDNNKHHPVMLHRAVLGSLERFIGILIENCA 476

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G +P WL+P+QA++  +  +  EYAQ++  +L      +  D   + +N KIR+H  +K+
Sbjct: 477 GIMPPWLAPVQAVIVPVAPAFNEYAQKVQKVLDEKGFRVIADIGTDRMNAKIRKHQEEKV 536

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              +I G  E    S+ +R       + ++L + I  L  
Sbjct: 537 IYQLIVGQSEMDNNSVAVRMRKGG-QKVMTLDEFISFLKD 575


>gi|239978444|ref|ZP_04700968.1| threonyl-tRNA synthetase [Streptomyces albus J1074]
          Length = 655

 Score =  562 bits (1448), Expect = e-158,   Method: Composition-based stats.
 Identities = 250/657 (38%), Positives = 371/657 (56%), Gaps = 42/657 (6%)

Query: 13  SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLA 71
           S +   V  TG+  A+  +    +  +A  ++G++ DL+    +G S+E +       L 
Sbjct: 7   SEREERVVTTGTTAADLFAGE--RTVIAARVDGELKDLAYVPGDGESVEPVDISSGDGLD 64

Query: 72  VIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIA 131
           ++RHS AH+MA+AVQ ++PE ++ IGP ++ GFYYDFD  +PF+ ++L ++EKKMQEI  
Sbjct: 65  ILRHSTAHVMAQAVQELFPEAKLGIGPPVKGGFYYDFDVAEPFTPEDLKRVEKKMQEIQK 124

Query: 132 RDSPFLKQYLSHEKARELFESKKEAYKVEIL-------------ESIPAKENVTLYRQGE 178
           R   F ++  + E AR   E   E YK+E++             ++      +T+Y   +
Sbjct: 125 RGQRFSRRVTTDEDARA--ELAGEPYKLELIGLKGNAAQAADGADAEVGGGELTIYDNLD 182

Query: 179 -------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQEL 231
                  W DLCRGPH+ +T  +  F KLM+ A AYWRG    P L RIYGTAW +++EL
Sbjct: 183 AKTGELCWKDLCRGPHLPTTRNIPAF-KLMRSAAAYWRGSEKNPQLQRIYGTAWPSKEEL 241

Query: 232 TQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKD 289
             +L FL E+EKRDHRKL  E+DLF   ++ G G+  +H KG  + + + +Y RR     
Sbjct: 242 KAHLEFLAEAEKRDHRKLGTELDLFSFPDELGPGLAVFHPKGGVVRKEMENYSRRRHEDA 301

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
            YE +NTP +  +HL++ SGH  +Y   MF          D + + LK MNCP H  +F 
Sbjct: 302 GYEFVNTPHISKEHLFETSGHLPNYSEGMFPPIEF-----DGQNYRLKAMNCPMHNLIFK 356

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
              +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDD+H++CTKEQM  E   +  
Sbjct: 357 GRGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRSRGFTQDDSHIYCTKEQMPEELDSLLT 416

Query: 410 LIISIYKDFGFEKIMVKLSTRPEK---RVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
            ++ + +D+G  +  ++LSTR  +    +G DA W++A   ++   +      +  +   
Sbjct: 417 FVLDLLRDYGLNQFELELSTRDPESDKFIGEDAEWEEATEALRQAAE------KQGLPLV 470

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
              G  A+YGPK     KDAIGR WQ  TIQVDF  P RF   Y  +   +  PVMIHRA
Sbjct: 471 PDPGGAAYYGPKISVQAKDAIGRSWQMSTIQVDFQQPKRFGLEYTAADGSRQQPVMIHRA 530

Query: 527 VFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF 586
           +FGSIERF  +++E++ G  P WL+P+QA+   I  + V Y QE A   K+  L +E D 
Sbjct: 531 LFGSIERFFAVLLEHYAGAFPAWLAPVQAVGIPIGDAHVSYLQEFAADAKARGLRVEVDS 590

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            ++ +  KIR H   K+P +II GD++ +  ++  R    +    +   DA+  L  
Sbjct: 591 SSDRMQKKIRNHQKAKVPFMIIVGDEDMNAGTVSFRYRDGSQENGIPREDALAKLQD 647


>gi|291550699|emb|CBL26961.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Ruminococcus
           torques L2-14]
          Length = 650

 Score =  562 bits (1447), Expect = e-158,   Method: Composition-based stats.
 Identities = 243/654 (37%), Positives = 360/654 (55%), Gaps = 19/654 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T  DGS K +    +  DVA  IS  LA+ A A  ++G+V DL   + ++  + I+T  
Sbjct: 3   ITLKDGSKKEYSEAKSVIDVAFDISEGLARAACAGEVDGEVVDLRTVLDKDCELNILTAR 62

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D + LAV+RH+ +H+MAEAVQ+++PE +VAIGP I+ GFYYDF+  Q FS D+L  IEK+
Sbjct: 63  DEKGLAVLRHTASHVMAEAVQTLFPEAKVAIGPSIDTGFYYDFEC-QSFSRDDLDAIEKE 121

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M++II + +   +   S E A   F+ K E YKVE++E +P  E ++ Y QG+W DLC G
Sbjct: 122 MKKIIKKGAKIERFTKSREDAIAFFKEKNEPYKVELIEDLPEGEEISFYSQGDWVDLCAG 181

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PH+ ST  +K F KL+  +GAYWRGD N+ ML+RIYGTA+ T+ EL ++L  LEE++KRD
Sbjct: 182 PHLMSTKGIKAF-KLLSSSGAYWRGDENKHMLTRIYGTAYATKDELKEHLTQLEEAKKRD 240

Query: 246 HRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQH 303
           H KL REM LF      G G+      G  I Q L  ++   + K  Y    TP +    
Sbjct: 241 HNKLGREMKLFTTVDVIGQGLPLIMPNGVIIMQELQRWIEDEEAKRGYIRTKTPLMAKSD 300

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           L++ SGHWD Y+  MF +    D  KD   FAL+PM CP    V+     SYR+LP+R  
Sbjct: 301 LYKISGHWDHYKEGMFVL---GDEEKDKEVFALRPMTCPFQYYVYKAEQHSYRDLPLRYG 357

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           E  +++RNE SG +HGL RVR FT  + H+    +QM  E      L     +  G E+ 
Sbjct: 358 ETSTLFRNEDSGEMHGLTRVRQFTISEGHLVVRPDQMVKEFKDCIALAQYCLQVLGVEED 417

Query: 424 MVKL-----STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           +         T  +K +G+  +W++ E  ++ +L  +       I     +GE AFYGPK
Sbjct: 418 VTYHLSKWDPTDTKKYIGAPEVWEETEGHIRTMLQELN------IPFVEDVGEAAFYGPK 471

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +   K+  G++    TIQ D  L  +F+ +Y++ + +K  P +IHR   G  ER +  +
Sbjct: 472 VDINAKNVYGKEDTMITIQWDALLAEQFDMYYIDENGDKQRPYIIHRTSVGCYERTLAWL 531

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE + G  P WL P Q  V  I+    +YA ++   LK  ++    D R+E + YKIRE 
Sbjct: 532 IEKYAGMFPTWLCPEQVRVIPISDKYNDYAAKVEAQLKEANIRCSVDGRSEKMGYKIREA 591

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
            + ++P ++I G KE  E+ + +R           L + I  +  E      +K
Sbjct: 592 RLNRVPYLLIVGAKEEEEQKVSVRSRYLGDEGSKDLGEFIEAIKDEIAKKTIRK 645


>gi|302121711|gb|ADK92877.1| threonyl-tRNA synthetase [Hypericum perforatum]
          Length = 721

 Score =  562 bits (1447), Expect = e-158,   Method: Composition-based stats.
 Identities = 263/613 (42%), Positives = 375/613 (61%), Gaps = 31/613 (5%)

Query: 47  VCDLSDP---VREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG 103
           V D   P   + E  I + T +    L  IRH+CAH+MA AVQ ++P+ +V IGP IE+G
Sbjct: 114 VEDTQKPEPVLTEERIVLPTNQSSDRLLKIRHTCAHVMAMAVQKLYPDAKVTIGPWIENG 173

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE 163
           FYYDFD E P +  EL +I+K+M  II R+ P +++ +S ++A+    S  E YK+EIL+
Sbjct: 174 FYYDFDME-PLTDKELKRIKKEMDRIIGRNLPLVREEVSRDEAQRRIMSVNEPYKMEILD 232

Query: 164 SIPAKENVTLYRQ-----------GEWFDLCRGPHVRSTGQV-KKFFKLMKVAGAYWRGD 211
           SI   E +T+Y              EW+DLC GPHV +TG + +K  +L  VAGAYWRGD
Sbjct: 233 SIKE-EPITIYHIAACRFISLFLGDEWWDLCAGPHVETTGIIDRKAVELESVAGAYWRGD 291

Query: 212 SNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHR 270
               ML RIYGTAW ++++L  YL+F EE+++RDHR+L +++DLF I ++ G G++FWH 
Sbjct: 292 EKNQMLQRIYGTAWESEEQLKAYLHFKEEAKRRDHRRLGQDLDLFSIQDEAGGGLVFWHP 351

Query: 271 KGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
           KG  +   +    ++  I + YE + TP V    LW+ SGH D YR NMF     +D   
Sbjct: 352 KGAIVRHIIEDAWKKMHIANGYELLYTPHVAKADLWKISGHLDFYRENMFEQMKIED--- 408

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
               + L+PMNCP H+ ++     SYR+ P+R+AE G+VYR E SGSLHGL RVRGFTQD
Sbjct: 409 --EQYQLRPMNCPYHILIYKRKQNSYRDFPIRVAELGTVYRYELSGSLHGLFRVRGFTQD 466

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMK 449
           DAH+FC ++Q+ +E   + +L   I   FGF +  V LSTRPEK VG D +WD A N ++
Sbjct: 467 DAHIFCLEDQIKDEIRGVLDLTEEILLLFGFSRYEVNLSTRPEKAVGGDEIWDKATNALR 526

Query: 450 GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAF 509
             LD          +  +  G GAFYGPK +  ++DA+GR WQC TIQVDFNLP RF+  
Sbjct: 527 NALDD------KGWDYEIDEGGGAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIT 580

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQ 569
           YV++ SEK  P++IHRAV GS+ERF G++IE++ G+ PLWL+PIQ  V  +T + +E+  
Sbjct: 581 YVDATSEKKRPILIHRAVLGSLERFFGVLIEHYAGDFPLWLTPIQVRVLPVTDNQLEFCN 640

Query: 570 EIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           E+   LK   +  E     E +   IR    +K+P++ + G KE   +++ +R   S   
Sbjct: 641 EVTRKLKDSGVRAEV-CHGERLPKLIRNAEKQKVPLMAVVGPKEVETQTVTVRSRSSGDV 699

Query: 630 QKVSLLDAIPILT 642
             + + D I  + 
Sbjct: 700 GTIDIDDFISRIK 712


>gi|126640661|ref|YP_001083645.1| threonyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978]
          Length = 549

 Score =  562 bits (1447), Expect = e-158,   Method: Composition-based stats.
 Identities = 269/550 (48%), Positives = 377/550 (68%), Gaps = 14/550 (2%)

Query: 94  VAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESK 153
           + IGP+IE+GFYYD    +PF+ D++A IE++M+++I +D   +K+    ++  ++F  +
Sbjct: 1   MVIGPVIEEGFYYDIWMPRPFTLDDMAAIEERMKKLIDQDYDVIKKMTPRDEVIKVFTDR 60

Query: 154 KEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSN 213
            E YK+ ++E +P ++ + LY   E+ D+CRGPHV +T  +K F KL K++GAYWRGD+ 
Sbjct: 61  GEEYKLRLVEDMPEEKAMGLYYHQEYVDMCRGPHVPNTKFLKSF-KLTKISGAYWRGDAK 119

Query: 214 RPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGW 273
              L RIYGTAW  +++L  Y+  +EE+EKRDHRK+ + +DLFH+ E+  G++FWH  GW
Sbjct: 120 NEQLQRIYGTAWADKKQLAAYIKRIEEAEKRDHRKIGKALDLFHMQEEAPGMVFWHANGW 179

Query: 274 KIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
            I+Q L  YMR+ +  + Y+EI TPQ++D  LW++SGH  +Y  NMF       T  + R
Sbjct: 180 TIYQVLEQYMRKVQQDNGYQEIKTPQIVDFTLWEKSGHAANYAENMFT------THSESR 233

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
            +A+KPMNCP HV VFN GLKSYR+LP+RLAEFGS +RNEPSGSLHG+MRVRGFTQDDAH
Sbjct: 234 NYAVKPMNCPCHVQVFNQGLKSYRDLPIRLAEFGSCHRNEPSGSLHGIMRVRGFTQDDAH 293

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
           +FCTKEQ+  E      L + +YKDFGFE++ +KLSTRPEKRVG DALWD AE  +   L
Sbjct: 294 IFCTKEQIGKEVADFIKLTLDVYKDFGFEEVQMKLSTRPEKRVGDDALWDLAEKSLADAL 353

Query: 453 DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
           D         +   +  GEGAFYGPK E+ LKD +GR WQCGTIQ DFNLP R +A YV 
Sbjct: 354 DAAG------LEWELQPGEGAFYGPKIEFSLKDCLGRVWQCGTIQCDFNLPVRLDASYVT 407

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIA 572
             +E+  PVM+HRA+ GS ERFIGI+IE++ G +P WLSP+QA V  IT S  E ++++ 
Sbjct: 408 EENERDQPVMLHRAILGSFERFIGILIEHYAGFMPPWLSPVQACVMNITDSQAEASEQVV 467

Query: 573 NLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
             LK + L   +D RNE I +KIRE ++++IP +++ GD+E  E ++ +R         +
Sbjct: 468 AKLKENGLRAISDLRNEKIGFKIRERTLERIPYLLVLGDREVEEGTVNVRTRSGKNLGTM 527

Query: 633 SLLDAIPILT 642
           S+   I ++ 
Sbjct: 528 SVDAFIDLVK 537


>gi|148508028|gb|ABQ75826.1| threonine--tRNA ligase [uncultured haloarchaeon]
          Length = 643

 Score =  562 bits (1447), Expect = e-158,   Method: Composition-based stats.
 Identities = 244/647 (37%), Positives = 366/647 (56%), Gaps = 23/647 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEI 61
           S+I +T PDG+  +    AT  DVA  I   L +  +A  ++G++ +   PV +G+ IEI
Sbjct: 2   SEIVVTLPDGAELSVSKGATVEDVAYEIGPGLGRDTIAGKVDGELVEKQTPVYDGARIEI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +T +      V+RHS AH+ A+A++ ++PE  + IGP  ++GF+YD           +  
Sbjct: 62  VTDQSDEYRRVLRHSAAHVFAQALKRLYPEALLTIGPPTDEGFHYDIA-NVDLDESAVDD 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWF 180
           IE +M++II  D P  +   + E+A E++   +  YK +IL++  A E+ V+ Y+Q E+ 
Sbjct: 121 IEAEMKDIIDADYPIERMTKTREEAFEIYADNQ--YKRDILQTEAADEDEVSFYQQDEFI 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLC GPHV STG +     L  ++ AYWRG+ +  ML R+ GTA+ T+  L  YL   E+
Sbjct: 179 DLCEGPHVESTGDIGAVTLL-SISSAYWRGNEDNDMLVRVSGTAFETEGALEAYLERREK 237

Query: 241 SEKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           +++RDHRK+ +E++LF I +  G G+  +H  G KI   L SY     +   YE + TP 
Sbjct: 238 AKERDHRKIGQELELFSIPDVTGPGLPLYHPNGKKILNELSSYAESLNVDAGYEPVETPH 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW+ SGH+++Y  +MF +  +DD       + LKPMNCPGH  +FN    SYR+L
Sbjct: 298 LFKTELWKVSGHYENYVDDMFLLDVSDD------EYGLKPMNCPGHATIFNQQSWSYRDL 351

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           PVR  E G VYR E  G L GL RV  FT DD H+FCT EQ+  E  ++   I  +   F
Sbjct: 352 PVRYYEDGKVYRKEQRGELSGLSRVWAFTIDDGHLFCTPEQIEQEVTQVIESIQEVLNTF 411

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           G +  +  L+TRPEK VGSD +W  AE+ ++ VL +        IN  +  G+GAFYGPK
Sbjct: 412 GLDAEVA-LATRPEKSVGSDEIWQQAESQLETVLTS------RGINYDLEPGDGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++  +DA+GR+W   T+Q+DFN+P RF+  Y    ++   PVMIHRA++GS ERF  ++
Sbjct: 465 IDFAFEDALGRNWDGPTVQLDFNMPDRFDLSYTGEDNQDHQPVMIHRALYGSYERFFMVL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+F G  PLWL+P Q  +  I+   + YA  + N        +E D +  T++ KIR  
Sbjct: 525 IEHFDGKFPLWLAPEQIRILPISDDQLGYAHRVKNQFDD--FRVEIDDQTRTLSRKIRAG 582

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
              +IP +II G  E    +I +R       Q V++      +  E 
Sbjct: 583 QDDRIPYMIILGSDEEEAGTISVRDRFENEKQDVNIDAFRSHVNAER 629


>gi|317125011|ref|YP_004099123.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Intrasporangium
           calvum DSM 43043]
 gi|315589099|gb|ADU48396.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Intrasporangium
           calvum DSM 43043]
          Length = 664

 Score =  562 bits (1447), Expect = e-158,   Method: Composition-based stats.
 Identities = 245/669 (36%), Positives = 357/669 (53%), Gaps = 43/669 (6%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI- 59
           M + I +T   GS ++     T  ++ +       +  V   +NG++ DL   V +G + 
Sbjct: 1   MSAPITVTVA-GSERSVDAQTTAGELLDQAGAG-GRDVVVARVNGELRDLFHLVADGDVV 58

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           E +T +    LAV+RHS AH++A+AVQS+ P  ++ IGP I DGFYYDFD E PF  D+L
Sbjct: 59  EPVTVDSADGLAVLRHSTAHVLAQAVQSLDPTAKLGIGPPIRDGFYYDFDVETPFHPDDL 118

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE---------------- 163
             +EK MQ+II     F ++ ++   A  L E   E YK E++                 
Sbjct: 119 KALEKAMQKIINEGQTFERRVVT--DADALEELAHEPYKCELVGLKGGAGDAAEGAGVEV 176

Query: 164 ---SIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRI 220
               +   +NV       W DLCRGPH+ ST  +   FKLM+ A AYWRG    P L RI
Sbjct: 177 GAGELTIYDNVRRDGTRAWGDLCRGPHIPSTKLIGNAFKLMRSAAAYWRGSEKNPQLQRI 236

Query: 221 YGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTL 279
           YGTAW T+ EL  YL  L E+E+RDHR+L  E+DLF   ++ GSG+  +H KG  I + +
Sbjct: 237 YGTAWPTKDELKAYLDRLAEAERRDHRRLGAELDLFSFPDELGSGLPVFHPKGGVIKREM 296

Query: 280 ISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKP 338
             Y+RR  I++ ++ + TP +    L+  SGH   Y   MF          +   + LK 
Sbjct: 297 EDYVRRRHIEEGFDYVGTPHITKDGLFHTSGHLPYYADTMFPPMEL-----EGAKYQLKA 351

Query: 339 MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE 398
           MNCP H  ++    +SYRELP+R  EFGSVYR E SG +HGL RVRG TQDD+H + T E
Sbjct: 352 MNCPMHNLIYQSRGRSYRELPLRFFEFGSVYRYEKSGVVHGLTRVRGMTQDDSHSYVTPE 411

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK------RVGSDALWDDAENIMKGVL 452
           Q   E   + + ++S+ +DFG +   ++LSTR  +       +GSD  W+ A  +++ V 
Sbjct: 412 QAPAEIKHLLDFVLSLLRDFGLDDFYLELSTRDTEGEKSAKFIGSDEQWEVATKVLEDVA 471

Query: 453 DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
                     +      G  AFYGPK     +DAIGR WQ  TIQ DFN P RF   Y  
Sbjct: 472 TASG------LELVADPGGAAFYGPKISVQARDAIGRTWQMSTIQYDFNQPERFGLEYQA 525

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIA 572
           +   +  PVMIH A FGSIERF+G+++E++ G  P+WLSP+Q +   +     +Y   + 
Sbjct: 526 ADGTRQQPVMIHSAKFGSIERFLGVLVEHYAGAFPVWLSPVQVLGVPVADEYADYLGGVL 585

Query: 573 NLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
           + L+   + +E D  ++    KIR  S  K+P ++I G+ + +  ++  R    +    V
Sbjct: 586 DRLRRKGVRVELDASDDRFPKKIRNASKAKVPFVLIAGEDDRAADAVSFRFRDGSQKNGV 645

Query: 633 SLLDAIPIL 641
            + DAI  +
Sbjct: 646 PIDDAIAEV 654


>gi|195952891|ref|YP_002121181.1| threonyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
 gi|195932503|gb|ACG57203.1| threonyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
          Length = 637

 Score =  562 bits (1447), Expect = e-158,   Method: Composition-based stats.
 Identities = 255/601 (42%), Positives = 383/601 (63%), Gaps = 18/601 (2%)

Query: 48  CDLSDPVREG-SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE--VQVAIGPIIEDGF 104
            DL  P+  G +++ IT +D  SL ++RHS AHIMA+A++ I+ +  V + IGP  EDGF
Sbjct: 42  YDLQTPIYHGGTLKPITKQDKESLDILRHSLAHIMAQALKEIYGDEKVHLGIGPTTEDGF 101

Query: 105 YYDFDKE-QPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE 163
           +YD + E      ++L  IE KM+EII R     ++ L  E+A + FE+KKE YK++I+ 
Sbjct: 102 FYDVEVEGHHIGEEDLKIIENKMKEIIKRGLDIKRKELPREEALKFFENKKEVYKLDIIN 161

Query: 164 SIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
           S+P+   +++Y QGE+ DLCRGPH+ +T     F KL  +AGAYWR D+++PML RIYG 
Sbjct: 162 SLPSDAKISVYEQGEFVDLCRGPHIPNTALAGAF-KLSSIAGAYWRADASKPMLQRIYGI 220

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISY 282
           A+ T++EL + L   EE++KRDHR+L +E++LF I  + G G+I W  KG  + Q +  Y
Sbjct: 221 AFWTEKELEERLKLYEEAKKRDHRRLGKELELFTIDEQVGPGLIIWLPKGAILRQVVEDY 280

Query: 283 MRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           ++ K +  +Y+ + TP V    LW+ SGH   Y+ NMF          +  ++ +KPMNC
Sbjct: 281 LKEKHRALNYQFVYTPHVGKSTLWETSGHLSYYKENMFPGM-----KIEEESYYVKPMNC 335

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
           P H+A++   ++S++ELP+++AE G+VYR E SG LHGLMRVRGFTQDDAH+FC +E + 
Sbjct: 336 PFHMAIYKSKIRSHKELPIKIAELGTVYRYEMSGVLHGLMRVRGFTQDDAHIFCKEEDVK 395

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
           +   +   L   + KDFGF    + +ST+P+  +G++  W  +E+ +K  L+ +  +   
Sbjct: 396 SVIKETLELAFDVLKDFGFYDYQIFISTKPKDAIGTEENWKISESALKESLEALDKT--- 452

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
                +  G GAFYGPK +  +KDAIGR WQC TIQ DFNLP RF+  YV   ++K  P 
Sbjct: 453 ---YEIDEGGGAFYGPKIDIKIKDAIGRFWQCSTIQFDFNLPERFDLTYVGEDNKKHRPY 509

Query: 522 MIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLS 581
           +IHRA+ GSIERF G++IE++ G+LP+WLSPIQA +  I    ++YA+E+  LLK  ++ 
Sbjct: 510 IIHRALLGSIERFTGVLIEHYAGHLPIWLSPIQAAIIPIADRHLDYAKEVFELLKVQNIR 569

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
              D R E +N KIR++ ++KIPI+++ GDKE  E++  +R         + + D I  L
Sbjct: 570 TYIDDRPERMNAKIRDNELQKIPILLVVGDKEVQEKTFSVRSKNEEFQGVMGIYDFIEKL 629

Query: 642 T 642
            
Sbjct: 630 K 630


>gi|257068556|ref|YP_003154811.1| threonyl-tRNA synthetase [Brachybacterium faecium DSM 4810]
 gi|256559374|gb|ACU85221.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Brachybacterium
           faecium DSM 4810]
          Length = 666

 Score =  561 bits (1446), Expect = e-157,   Method: Composition-based stats.
 Identities = 241/670 (35%), Positives = 375/670 (55%), Gaps = 44/670 (6%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           + I +T  DGS +      TG++V    +       VA+ I+G++ DL   + EG S+E 
Sbjct: 2   AQIAITL-DGSSQQLAEGTTGTEVFAGTA-----TIVALRIDGELRDLDTVLAEGQSVEG 55

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +    P  L+++RHS AH++A+AVQ   PE ++ IGP I DGFYYDFD  +PF+ + L  
Sbjct: 56  VDISSPDGLSILRHSAAHVLAQAVQKTNPEAKLGIGPPITDGFYYDFDVAEPFTPESLKA 115

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE------------------ 163
           +EK+M  II     F+++ +S + AR   E   E YK+E++                   
Sbjct: 116 LEKEMHRIIKSGQRFVRREISDDAARA--EEASEPYKLELIGLKSTAEDAAEGASVEVGE 173

Query: 164 -SIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYG 222
             +   +NV    Q  W DLCRGPH+ +T  +   F L + A AYWRG    PML RIYG
Sbjct: 174 GGLTMYDNVDKKGQTVWTDLCRGPHLPTTKLIGNGFALTRSAAAYWRGSEKNPMLQRIYG 233

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLIS 281
           TAW T++EL  +   + E+E+RDHR+L  E+DLF   ++ GSG+  +H KG  +   +  
Sbjct: 234 TAWPTKEELRAHQERIAEAERRDHRRLGSELDLFSFPDEIGSGLPVFHPKGAMVKMEMED 293

Query: 282 YMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD-------LRT 333
           Y RR  ++  Y  +++P +  ++L++ S H + Y   M+     D+   D        + 
Sbjct: 294 YSRRRHVEAGYSFVSSPHITKKNLFETSRHLEWYAEGMYPPMHVDEERDDEGNITRQGQD 353

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
           + LKPMNCP H  V+    +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDDAH+
Sbjct: 354 YYLKPMNCPMHNLVYRSRGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHI 413

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR-VGSDALWDDAENIMKGVL 452
           + T+EQM  E   +   ++ + +D+G +   ++LSTR  ++ VG +  WD+A   ++ V 
Sbjct: 414 YTTREQMKEELTSLLGFVLDLLRDYGLDDFYLELSTRDPEKSVGDETTWDEATRTLEEV- 472

Query: 453 DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
                +++  +      G  AFYGPK     KDAIGR WQ  TIQ+DF  P  F   Y  
Sbjct: 473 -----ATESGLELVPDPGGAAFYGPKISVQAKDAIGRTWQLSTIQLDFFEPELFELEYTA 527

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIA 572
               +  PVMIHRA+FGSIERF G+++E++ G  P+WL+P+Q +   + +  V Y +E+A
Sbjct: 528 PDGSRQRPVMIHRALFGSIERFFGVLLEHYAGAFPVWLAPVQVVGVPVAAEYVPYLEEVA 587

Query: 573 NLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
             L++H + +E D  ++ +  KIR H+ +K+P ++I G ++ +  ++  R    +    +
Sbjct: 588 AKLRAHGVRVEVDSSDDRMQKKIRTHTKEKVPYLLIAGGEDQAHGAVSFRMRDGSQDNGI 647

Query: 633 SLLDAIPILT 642
            +  A+  + 
Sbjct: 648 DVDAAVDRIV 657


>gi|323339586|ref|ZP_08079860.1| threonine--tRNA ligase [Lactobacillus ruminis ATCC 25644]
 gi|323092981|gb|EFZ35579.1| threonine--tRNA ligase [Lactobacillus ruminis ATCC 25644]
          Length = 685

 Score =  561 bits (1445), Expect = e-157,   Method: Composition-based stats.
 Identities = 226/645 (35%), Positives = 357/645 (55%), Gaps = 21/645 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIEIITP 64
           ++L FPDG++K F   AT  DVA SIS SLAKKAV   ++GK+ DL+  + +GSIEI+  
Sbjct: 42  MELKFPDGTVKEFEDGATVKDVAASISMSLAKKAVCGKLDGKLVDLNQKLSDGSIEIVAK 101

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQIE 123
           +       + H+ A ++A A+  ++P V+   G + E GFY+D DKE       +  ++ 
Sbjct: 102 DSDDGRIALWHTAAVVLAAALHDLYPNVKFGEGGVTEHGFYFDTDKEDGQVGEADFEKLT 161

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           KKM+EI+             ++A +L E   + Y+ EI++       V  ++     D  
Sbjct: 162 KKMEEIVKAKEKIEFVEYDLDEALKLVE--NDEYQTEIVKENAEDGKVYGHKLLNHVDFT 219

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
               +   G+VK F K++ VAGAYW+G S+ PML RIYGTA++ Q+EL + L   +E+ +
Sbjct: 220 SPVSLEDAGKVKVF-KVLSVAGAYWKGASSNPMLQRIYGTAFSKQKELDEELKRQQEAHE 278

Query: 244 RDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQVLD 301
           RDHR +   +DLF +      G+ +W   G  I +T+  Y + +++   YE + TP + +
Sbjct: 279 RDHRVIGNNLDLFFVDPKVGAGLPYWMPNGATIRRTIERYIIDKEVSWGYEHVYTPILAN 338

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             L++QSGHWD YR +MF          D     L+PMNCP H+ ++N  ++SYR+LP+R
Sbjct: 339 VDLYKQSGHWDHYREDMFPPMDMG----DGELLELRPMNCPSHIQIYNRHIRSYRDLPLR 394

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AE G ++R E SG+L GL RVR  T +D H F T +Q+  E  +   L++ +Y DF   
Sbjct: 395 IAELGMMHRYEKSGALTGLSRVREMTLNDGHTFVTPDQIEAEFKRTLQLMVEVYHDFNIN 454

Query: 422 KIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
               +LS R      K    D +W+ ++ ++K  +D +       +      GE AFYGP
Sbjct: 455 DYRFRLSYRDPKNTHKYYDDDEMWEKSQRMLKAAMDDLG------LEYFEAEGEAAFYGP 508

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +   K A+G +    TIQ+DF LP RF+  YV +  E+  PVMIHR +  ++ERF   
Sbjct: 509 KLDVQTKTALGGEETLSTIQLDFLLPERFDLKYVGADGEEHRPVMIHRGIVSTMERFTAY 568

Query: 538 MIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           + E +KG  P WL+P Q  V  +      +YA+++A+ L +  + +  D RNE + YKIR
Sbjct: 569 LTEMYKGAFPTWLAPKQVEVIPVNLDLHTDYARKLASALAARQIRVSVDDRNEKMGYKIR 628

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           +  + K+P  ++ GD E  + ++ +RR+G   T+ ++  D   IL
Sbjct: 629 QAQVNKVPYTLVVGDNEKEQGTVTVRRYGQEKTETMAFDDFKKIL 673


>gi|219681500|ref|YP_002467885.1| threonyl-tRNA synthetase [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|257471181|ref|ZP_05635180.1| threonyl-tRNA synthetase [Buchnera aphidicola str. LSR1
           (Acyrthosiphon pisum)]
 gi|254783512|sp|B8D8S6|SYT_BUCA5 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|219624343|gb|ACL30498.1| threonyl-tRNA synthetase [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
          Length = 642

 Score =  561 bits (1445), Expect = e-157,   Method: Composition-based stats.
 Identities = 286/649 (44%), Positives = 431/649 (66%), Gaps = 19/649 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
           MP    + F DGS + +    +  ++ ++   S+ K  +A+++N    +L+  +RE + I
Sbjct: 1   MPV---IRFYDGSQQVYEHSVSLIEIIKNKKPSIMKSLIAISVNNHFSNLNTFIREDAFI 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           E +  ++ ++L +IR+SCA +++ A+++IWP  Q+A   IIEDGFY D D ++  S  +L
Sbjct: 58  EFVDQKNYKALNIIRYSCAQLLSYAIKNIWPLAQIATSNIIEDGFYCDIDFKRSISEKDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +E +M+ ++ R+   L + +S+ +ARE+F+   E YKV ++ E+I     V+LY    
Sbjct: 118 ILLENQMKTLVKREYNILNKLISYSEAREIFQKCFEKYKVSLIDENINCNSKVSLYYHEN 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+  G  V +    K F KL K+ G YW+ + N  ML RIYGTAW  +QEL ++L +L
Sbjct: 178 YADIDIGLQVFNIKFCKYF-KLQKIGGVYWKKNKNNKMLQRIYGTAWTNKQELDKHLDYL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
            E EKRDHRK+ + + L+H+ E+  G+IFWH KGW IF  L +++R K+K+  YEE+ TP
Sbjct: 237 NELEKRDHRKIGKFLQLYHMQEESPGMIFWHNKGWIIFNELQNFVRVKLKEYKYEEVKTP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ +W+QSGHWD+Y+  +F       T+ + R + +KPMNCPGHV +FN  LKSYR+
Sbjct: 297 LLIDKLIWKQSGHWDNYKNAIFT------TLSEHREYCIKPMNCPGHVQIFNSRLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSGSLHGLMRVR FTQDDAH+FCT+EQ+ +E      +I  +Y  
Sbjct: 351 LPIRMAEFGSCHRNEPSGSLHGLMRVRNFTQDDAHIFCTREQVRSEINDCIKMIYDLYST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           F F+KI+VKLSTRPEKR+G+D+LW+++E  +  +L       ++ ++     GEGAFYGP
Sbjct: 411 FHFKKILVKLSTRPEKRIGTDSLWNESEKDLSDMLI------ENHLSFEYQSGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+IL+D++ R+WQCGTIQ+DF LP R ++FY+N  +EK  PV+IHRA+ GSIERFIGI
Sbjct: 465 KIEFILQDSLDRNWQCGTIQLDFYLPLRLSSFYINEKNEKKVPVIIHRAILGSIERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE   GNLP WLSP+Q ++ +IT  +  Y +E+       ++ IE D RNE I +KIRE
Sbjct: 525 LIEECSGNLPTWLSPVQVVIISITDISSGYVKELFKKFSDVNIRIECDLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           H++++IP I+ICG+KE+S + I +R         + +   I  L KE +
Sbjct: 585 HTLRRIPYILICGEKESSSKKISVRNRQGHNFGMIDVDFFIKKLQKEII 633


>gi|269977288|ref|ZP_06184261.1| threonyl-tRNA synthetase [Mobiluncus mulieris 28-1]
 gi|269934591|gb|EEZ91152.1| threonyl-tRNA synthetase [Mobiluncus mulieris 28-1]
          Length = 669

 Score =  561 bits (1445), Expect = e-157,   Method: Composition-based stats.
 Identities = 251/677 (37%), Positives = 378/677 (55%), Gaps = 50/677 (7%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SI 59
           M   + +   DG         TG D+         K+ +A  ING+  DL   + EG ++
Sbjct: 1   MSISVVI---DGKATTIAEDQTGQDIYRD-----RKEVIACFINGEPRDLYRNLHEGDAL 52

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           E IT +    L ++RHS  H+MA+AV+ + P+V+  IGP IE+GFYYDF   QPF+ ++L
Sbjct: 53  EAITIDSEMGLNILRHSATHVMAQAVKQVRPDVKYGIGPFIENGFYYDFGVAQPFTPEDL 112

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL----------------- 162
            +IEK M  I   D  F+++ ++ ++AR+  E   + YK+E++                 
Sbjct: 113 KEIEKYMARICKEDQRFVRRAVTEDEARQ--ELADQPYKLELIGLKGGSDEDNDQAAAGA 170

Query: 163 ------ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPM 216
                   +   +NV    +  W DLCRGPH+ ST  +   FKL+KV+ AYWRGD     
Sbjct: 171 SVEVGGAELTIYDNVRKNGETAWKDLCRGPHIPSTRLLSGAFKLLKVSAAYWRGDQKNDS 230

Query: 217 LSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKI 275
           L RIYGTAW T++EL  Y+  LEE+EKRDHR+L  E+DLF   E+ GSG+  +H KG  +
Sbjct: 231 LQRIYGTAWPTKEELKAYVTRLEEAEKRDHRRLGTELDLFSFPEEIGSGLPVFHPKGALV 290

Query: 276 FQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT------- 327
              + +Y R R +++ Y  ++TP V    L++ SGH   Y+  MF     D+        
Sbjct: 291 RMEMENYSRQRHLEEGYSFVSTPHVTKGQLFETSGHLSWYKEGMFPAMHLDEERDAQGNV 350

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
            K+   + LKPMNCP H  +F    +SYRELP+RL EFG+VYR E SG +HGL R RGFT
Sbjct: 351 TKEGADYYLKPMNCPMHNLIFKSRTRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFT 410

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAEN 446
           QDD+H++CT++QM +E  K+   ++ + KD+G +   ++LST+  +  VGSD +W++A  
Sbjct: 411 QDDSHIYCTRDQMKDELTKLLTFVLDLLKDYGLDDFYLELSTKNPQKFVGSDEVWEEATR 470

Query: 447 IMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF 506
            ++ V +         +         AFYGPK     +DAIGR WQ  TIQ+DFNLP RF
Sbjct: 471 TLQEVAEASG------LELRPDPEGAAFYGPKISVQARDAIGRTWQMSTIQLDFNLPERF 524

Query: 507 NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVE 566
              Y  +   +  PVMIHRA+FGSIERF G++ E++ G  P WL+P+Q  +  +  +   
Sbjct: 525 ELEYTAADGSRQRPVMIHRALFGSIERFFGVLTEHYAGAFPAWLAPVQVRLVPVADTFNA 584

Query: 567 YAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS 626
           Y +++A  L++ ++ +E D  ++    KIR  +  K+P  +I G ++A   ++  R  G 
Sbjct: 585 YCEDVAKQLRAENVRVEIDESDDRFGKKIRNAAKDKVPFTLIVGGEDAEHGAVSFRYRGG 644

Query: 627 TTTQKVSLLDAIPILTK 643
                V +  AI  +T+
Sbjct: 645 EQKNGVKISAAIQEITE 661


>gi|307700804|ref|ZP_07637829.1| threonine--tRNA ligase [Mobiluncus mulieris FB024-16]
 gi|307613799|gb|EFN93043.1| threonine--tRNA ligase [Mobiluncus mulieris FB024-16]
          Length = 669

 Score =  560 bits (1444), Expect = e-157,   Method: Composition-based stats.
 Identities = 252/677 (37%), Positives = 378/677 (55%), Gaps = 50/677 (7%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SI 59
           M   + +   DG         TG D+         K+ +A  ING+  DL   + EG ++
Sbjct: 1   MSISVVI---DGKATTIAEDQTGQDIYRD-----RKEVIACFINGEPRDLYRNLHEGDAL 52

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           E IT +    L ++RHS  H+MA+AV+ + P+V+  IGP IE+GFYYDF   QPF+ ++L
Sbjct: 53  EAITIDSEMGLNILRHSATHVMAQAVKQVRPDVKYGIGPFIENGFYYDFGVAQPFTPEDL 112

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL----------------- 162
            +IEK M  I   D  F+++ ++ ++AR+  E   + YK+E++                 
Sbjct: 113 KEIEKYMARICKEDQRFVRRAVTEDEARQ--ELADQPYKLELIGLKGGSDEDNDQAAAGA 170

Query: 163 ------ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPM 216
                   +   +NV    +  W DLCRGPH+ ST  +   FKL+KV+ AYWRGD     
Sbjct: 171 SVEVGGAELTIYDNVRKNGETAWKDLCRGPHIPSTRLLSGAFKLLKVSAAYWRGDQKNDS 230

Query: 217 LSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKI 275
           L RIYGTAW T++EL  Y+  LEE+EKRDHR+L  E+DLF   E+ GSG+  +H KG  +
Sbjct: 231 LQRIYGTAWPTKEELKAYVTRLEEAEKRDHRRLGTELDLFSFPEEIGSGLPVFHPKGALV 290

Query: 276 FQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT------- 327
              + +Y R R +++ Y  ++TP V    L++ SGH   Y+  MF     D+        
Sbjct: 291 RMEMENYSRQRHLEEGYSFVSTPHVTKGQLFETSGHLSWYKEGMFPAMHLDEERDAQGNV 350

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
            K+   + LKPMNCP H  +F    +SYRELP+RL EFG+VYR E SG +HGL R RGFT
Sbjct: 351 TKEGADYYLKPMNCPMHNLIFKSRTRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFT 410

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAEN 446
           QDD+H++CT++QM +E  K+   ++ + KD+G +   ++LST+  +  VGSD +W++A  
Sbjct: 411 QDDSHIYCTRDQMKDELTKLLTFVLDLLKDYGLDDFYLELSTKNPQKFVGSDEVWEEATR 470

Query: 447 IMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF 506
            ++ V +         +         AFYGPK     +DAIGR WQ  TIQ+DFNLP RF
Sbjct: 471 TLQEVAEASG------LELRPDPEGAAFYGPKISVQARDAIGRTWQMSTIQLDFNLPERF 524

Query: 507 NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVE 566
              Y  +   +  PVMIHRA+FGSIERF G++ E++ G  P WL+P+Q  +  +  +   
Sbjct: 525 ELEYTAADGSRQRPVMIHRALFGSIERFFGVLTEHYAGAFPAWLAPVQVRLVPVADTFNA 584

Query: 567 YAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS 626
           Y +++A  L++ ++ +E D  ++    KIR  +  KIP  +I G ++A   ++  R  G 
Sbjct: 585 YCEDVAKQLRAENVRVEIDESDDRFGKKIRNAAKDKIPFTLIVGGEDAEHGAVSFRYRGG 644

Query: 627 TTTQKVSLLDAIPILTK 643
                V +  AI  +T+
Sbjct: 645 EQKNGVKISAAIQEITE 661


>gi|15616745|ref|NP_239957.1| threonyl-tRNA synthetase [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|11134938|sp|P57225|SYT_BUCAI RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|25292947|pir||C84944 threonine-tRNA ligase (EC 6.1.1.3) [imported] - Buchnera sp.
           (strain APS)
 gi|10038808|dbj|BAB12843.1| threonyl-tRNA synthetase [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
          Length = 642

 Score =  560 bits (1444), Expect = e-157,   Method: Composition-based stats.
 Identities = 286/649 (44%), Positives = 431/649 (66%), Gaps = 19/649 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
           MP    + F DGS + +    +  ++ ++   S+ K  +A+++N    +L+  +RE + I
Sbjct: 1   MPV---IRFYDGSQQVYEHSVSLIEIIKNKKPSIMKSLIAISVNNHFSNLNTFIREDAFI 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           E +  ++ ++L +IR+SCA +++ A+++IWP  Q+A   IIEDGFY D D ++  S  +L
Sbjct: 58  EFVDQKNYKALNIIRYSCAQLLSYAIKNIWPLAQIATSNIIEDGFYCDIDFKRSISEKDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +E +M+ ++ R+   L + +S+ +ARE+F+   E YKV ++ E+I     V+LY    
Sbjct: 118 ILLENQMKMLVKREYNILNKLISYSEAREIFQKCFEKYKVSLIDENINCNSKVSLYYHEN 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+  G  V +    K F KL K+ G YW+ + N  ML RIYGTAW  +QEL ++L +L
Sbjct: 178 YADIDIGLQVFNIKFCKYF-KLQKIGGVYWKKNKNNKMLQRIYGTAWTNKQELDKHLDYL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
            E EKRDHRK+ + + L+H+ E+  G+IFWH KGW IF  L +++R K+K+  YEE+ TP
Sbjct: 237 NELEKRDHRKIGKFLQLYHMQEESPGMIFWHNKGWIIFNELQNFVRVKLKEYKYEEVKTP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ +W+QSGHWD+Y+  +F       T+ + R + +KPMNCPGHV +FN  LKSYR+
Sbjct: 297 LLIDKLIWKQSGHWDNYKNAIFT------TLSEHREYCIKPMNCPGHVQIFNSRLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSGSLHGLMRVR FTQDDAH+FCT+EQ+ +E      +I  +Y  
Sbjct: 351 LPIRMAEFGSCHRNEPSGSLHGLMRVRNFTQDDAHIFCTREQVRSEINDCIKMIYDLYST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           F F+KI+VKLSTRPEKR+G+D+LW+++E  +  +L       ++ ++     GEGAFYGP
Sbjct: 411 FHFKKILVKLSTRPEKRIGTDSLWNESEKDLSDMLI------ENHLSFEYQSGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+IL+D++ R+WQCGTIQ+DF LP R ++FY+N  +EK  PV+IHRA+ GSIERFIGI
Sbjct: 465 KIEFILQDSLDRNWQCGTIQLDFYLPLRLSSFYINEKNEKKVPVIIHRAILGSIERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE   GNLP WLSP+Q ++ +IT  +  Y +E+       ++ IE D RNE I +KIRE
Sbjct: 525 LIEECSGNLPTWLSPVQVVIISITDISSGYVKELFKKFSDVNIRIECDLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           H++++IP I+ICG+KE+S + I +R         + +   I  L KE +
Sbjct: 585 HTLRRIPYILICGEKESSSKKISVRNRQGHNFGMIDVDFFIKKLQKEII 633


>gi|262202217|ref|YP_003273425.1| threonyl-tRNA synthetase [Gordonia bronchialis DSM 43247]
 gi|262085564|gb|ACY21532.1| threonyl-tRNA synthetase [Gordonia bronchialis DSM 43247]
          Length = 691

 Score =  560 bits (1443), Expect = e-157,   Method: Composition-based stats.
 Identities = 245/675 (36%), Positives = 374/675 (55%), Gaps = 43/675 (6%)

Query: 1   MPSDIKLTFPDGSIKNFPVHAT-GSDVAESISRSLAKKAVAVA--INGKVCDLSD-PVRE 56
           MP ++ +T P  +    P   T G+ + E    +   +A+ V    +G++ DLS  P  +
Sbjct: 1   MPDEVMVTSP--ATIRVPAGTTAGTALREHEQPNKGPEAIVVVRDADGELRDLSWAPEHD 58

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSS 116
             +  +        +VIRHS AH++A+AVQ ++P  ++ IGP I+DGFYYDFD ++PF+ 
Sbjct: 59  TDVTPVAANTDAGRSVIRHSAAHVLAQAVQDLFPGTRLGIGPPIKDGFYYDFDVDEPFTP 118

Query: 117 DELAQIEKKMQEIIARDSPFLKQYL-SHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           ++L+++EKKM++II     F ++   S ++AR   E   E +K+E+++   A ++  +  
Sbjct: 119 EDLSKLEKKMRQIIKSGQRFSRRVYASKDEARA--ELANEPFKLELIDDKGAADDSEVME 176

Query: 176 QGE-----------------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLS 218
            G                  W DLCRGPHV +T  +  F KL + + AYWRGD +   L 
Sbjct: 177 VGGAELTAYDNLNPRTGERMWCDLCRGPHVPTTKYIAAF-KLTRSSAAYWRGDQDNADLQ 235

Query: 219 RIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQ 277
           RIYGTAW + +    YL  L E+EKRDHRKL  E+DLF   ++ GSG+  +H KG  I +
Sbjct: 236 RIYGTAWESTEAQDAYLEMLAEAEKRDHRKLGSELDLFSFPDEIGSGLPVFHPKGGVIRK 295

Query: 278 TLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTI-------K 329
            L  Y R R  +  YE + TP      L+  SGH D Y   M+     D+ +       +
Sbjct: 296 ELEDYSRLRHAQAGYEFVYTPHATKGDLFSLSGHLDWYADGMYPPMQLDEEVDADGTVRR 355

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
               + LKPMNCP H  +F    +SYRELP+RL EFG+VYR E SG +HGL R RGFTQD
Sbjct: 356 PAIDYYLKPMNCPMHNLIFRSRGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQD 415

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR-VGSDALWDDAENIM 448
           DAH++CT+EQM  E   +   ++ + +D+G +   ++LSTR   + +GSD  W++A  ++
Sbjct: 416 DAHIYCTREQMGEEVRSLLQFVLDLLRDYGLDDFYLELSTRNPDKSIGSDEAWEEATEVL 475

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
           +    +        ++     G  AFY PK     +DAIGR WQ  TIQVD  LP RF  
Sbjct: 476 RAAATSFG------LDLVDDPGGAAFYAPKISVQARDAIGRTWQMSTIQVDMMLPDRFEL 529

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYA 568
            Y  +   K  PVMIHRA+FGSIERF G++ E++ G  P WLSP+Q +   +  +  ++ 
Sbjct: 530 EYTGTDGAKHRPVMIHRALFGSIERFFGVLTEHYAGAFPAWLSPVQVVGIPVADAFADHL 589

Query: 569 QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
           Q + + L++  L  E D  ++ +  KIR H+  K+P +++ G+++    ++  R    T 
Sbjct: 590 QGVVDTLRAAGLRAEVDHSDDRMQKKIRNHTTGKVPFMLLAGERDVEAGAVSFRFRDGTQ 649

Query: 629 TQKVSLLDAIPILTK 643
              V + +A+ I+T 
Sbjct: 650 VNGVPVAEAVGIITD 664


>gi|160880797|ref|YP_001559765.1| threonyl-tRNA synthetase [Clostridium phytofermentans ISDg]
 gi|160429463|gb|ABX43026.1| threonyl-tRNA synthetase [Clostridium phytofermentans ISDg]
          Length = 584

 Score =  560 bits (1443), Expect = e-157,   Method: Composition-based stats.
 Identities = 243/593 (40%), Positives = 364/593 (61%), Gaps = 15/593 (2%)

Query: 55  REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPF 114
           ++GSI     E+        H+ AH++A+AV+ ++P  + AIGP +E GFYYDF+ +  F
Sbjct: 6   KDGSIVERKFEELEGREAFWHTSAHVLAQAVKRLYPTTKCAIGPSVEQGFYYDFEFDFNF 65

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
           +++ L ++E  M+ II       +  L+ E+A    + K E YK+EIL  +P    ++ +
Sbjct: 66  TAEHLQKVEDMMKAIIEESLVLQQFILNREEAIHYLKKKGEPYKLEILNELPIDAKISFF 125

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
            QGE+ DLC GPH+ +   +K   KL++VAGAYWRG  +  ML+RIYG ++  + +L  Y
Sbjct: 126 EQGEFVDLCSGPHLSNVSYIK-ALKLIQVAGAYWRGKEDNKMLTRIYGISFPKKHDLEVY 184

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEE 293
           L   EE++ RDHRKL +E++LF   E+G G  F+  KG  I   L+ Y R+   ++ Y E
Sbjct: 185 LKQQEEAKLRDHRKLGKELELFTFMEEGPGFPFFLPKGMVIKNLLLDYWRKLHEREGYVE 244

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           I+TP +L+++LW+ SGHWD Y+ NM+  K       D   +A+KPMNCPG + V+    +
Sbjct: 245 ISTPMMLNRNLWETSGHWDHYKENMYQTKI------DDEIYAIKPMNCPGGMLVYGSKPR 298

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SY+ELP+R  E G V+R+E SG LHGLMRVR FTQDDAH+F T+EQ+ +E   +  LI  
Sbjct: 299 SYKELPLRFGELGLVHRHEKSGQLHGLMRVRCFTQDDAHLFMTEEQIKDEIKGVVRLIDE 358

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           +YK FGF    V+LSTRPE  +GS   W+ A + +K  L+ ++      +   +  G+GA
Sbjct: 359 VYKKFGFTYH-VELSTRPENSIGSLEDWEIATDALKMALEEME------LPYLINEGDGA 411

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK ++ LKD+IGR WQCG+IQ+DF LP RF   Y+ +  E   P+MIHR +FGSIER
Sbjct: 412 FYGPKIDFHLKDSIGRTWQCGSIQLDFQLPLRFGIEYIGADGEAHRPIMIHRVIFGSIER 471

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           F GI+IE++ G  P WL+P+Q  + T++    +YAQ+I   LK   + +  D R+E + Y
Sbjct: 472 FFGILIEHYAGRFPTWLAPVQVKILTVSEQFNDYAQDILMELKQQGIRVSLDSRSEKLGY 531

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           K+RE  + KIP ++I G  E   + + +            + D I ++ KE++
Sbjct: 532 KVREARLDKIPYVLIIGQMEMENKQVSVWNREEGDLGGYVVEDLISLIKKENV 584


>gi|302820128|ref|XP_002991732.1| hypothetical protein SELMODRAFT_134156 [Selaginella moellendorffii]
 gi|300140413|gb|EFJ07136.1| hypothetical protein SELMODRAFT_134156 [Selaginella moellendorffii]
          Length = 647

 Score =  560 bits (1443), Expect = e-157,   Method: Composition-based stats.
 Identities = 218/628 (34%), Positives = 344/628 (54%), Gaps = 29/628 (4%)

Query: 2   PSDIKLTFPDGSIKNFPVH---ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EG 57
           P D+ +   DG +  +P      T  D+A  IS+  A   V   +NG + D+  P+  + 
Sbjct: 32  PIDVTV-LKDGEV-VYPGRRLLTTPLDIARLISKKKAADYVIAQVNGTLWDMGRPLEEDC 89

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII--EDGFYYDFDKE--QP 113
           ++ +   +D +      HS AHI+ E+++  +   ++ IGP     +GFYYD   E  + 
Sbjct: 90  TLVLYAFKDEQGRDTFWHSSAHILGESLEQAY-GCKLCIGPCTTRGEGFYYDAFYEDGRT 148

Query: 114 FSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTL 173
            + +    ++ ++ + +    PF +  ++ ++A E+       +KVEI+  +P    +T+
Sbjct: 149 LNEENFPAVQSQVTKAVQESQPFERIQVTRQQALEI--FSDNQFKVEIINDLPEDAVITV 206

Query: 174 YRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQ 233
           YR G   DLCRGPH+ +T  VK F   +K +  YW+G   R  L R+YG ++   Q L  
Sbjct: 207 YRCGPLVDLCRGPHIPNTSYVKAFS-CLKASACYWKGKQERESLQRVYGISYPDNQSLKA 265

Query: 234 YLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYE 292
           Y+   EE++KRDHR L +   LF   E   G  F+  KG  ++  L+ ++R + +   ++
Sbjct: 266 YMTKYEEAKKRDHRLLGKNQQLFFFHELSPGSAFFLPKGTIVYNKLLQFIRSEYRKRGFD 325

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+ TP + +  LW+QSGH   Y+ NMF  +       + + F LKPMNCPGH  +F H +
Sbjct: 326 EVVTPNIYNMKLWEQSGHAAHYKENMFVFEI------EKQEFGLKPMNCPGHCLLFQHRV 379

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
           +SYRELP+R+A+FG ++RNE SG+L GL RVR F+QDDAH+FC + Q+++E     + + 
Sbjct: 380 RSYRELPLRIADFGVLHRNELSGALTGLTRVRRFSQDDAHIFCMESQVYDEVKGCLDFLD 439

Query: 413 SIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
            +Y  FGF   + KLSTRPE  +G  ALWD AE  +   L+      Q      +  G+G
Sbjct: 440 YVYTIFGFTYDL-KLSTRPENFLGESALWDRAEGALADALNAHAKPWQ------MNEGDG 492

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK-CHPVMIHRAVFGSI 531
           AFYGPK +  + DA+ R +QC TIQ+DF  P RF   Y      K   PV+IHRA+ GS+
Sbjct: 493 AFYGPKIDIQVSDALNRKFQCATIQLDFQSPIRFKLSYSAEDEAKIERPVIIHRAILGSV 552

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           ER   I++E+  G  P WLSP QAIV TI+    +YA+E+   L +    ++ D  +  +
Sbjct: 553 ERMFAILLEDNVGKWPFWLSPRQAIVLTISEKFKDYAEEVRAKLHAAGFEVDVDVSDRKV 612

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSI 619
           + K+RE  +     +++ G  E  +  +
Sbjct: 613 DKKVREAQMAHYNYLLVVGAMEQEKGEV 640


>gi|239917575|ref|YP_002957133.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Micrococcus
           luteus NCTC 2665]
 gi|281413939|ref|ZP_06245681.1| threonyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
 gi|259516574|sp|C5CBI2|SYT_MICLC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|239838782|gb|ACS30579.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Micrococcus
           luteus NCTC 2665]
          Length = 672

 Score =  560 bits (1443), Expect = e-157,   Method: Composition-based stats.
 Identities = 247/674 (36%), Positives = 365/674 (54%), Gaps = 46/674 (6%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIE 60
           P +I LT  DG ++      TG D+              + ++G + DL+  +  G S+E
Sbjct: 4   PKNILLTV-DGELREVTHGTTGLDLFRE-----KPTTAVMRVDGLLWDLAREIPAGASVE 57

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            +   +P  L V+RHS AH+MA+AVQ + P  ++ IGP I DGFY+DFD + PF+ ++L 
Sbjct: 58  SVDITEPEGLEVLRHSTAHVMAQAVQQLRPGAKLGIGPYITDGFYFDFDVDDPFTPEDLK 117

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN---------- 170
           QI   MQ+I+     F ++ +  E AR   E   E YK+E+L    A +           
Sbjct: 118 QISSLMQKIVKSGQAFRRRVVDEETARA--EMADEPYKLELLGKKDAADTAGEGASVEVG 175

Query: 171 ---VTLYRQGE-------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRI 220
              +T+Y   +       W DLCRGPH+ ST  +   F L + A AYW G+     L RI
Sbjct: 176 AGEITIYDNVDRKTGDAVWCDLCRGPHLPSTKLIGNGFALTRSAAAYWLGNEKNKQLQRI 235

Query: 221 YGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTL 279
           YGTAW ++ +L  Y   L E+E+RDHRKL  E+DLF   ++ GSG+  +H +G  I + +
Sbjct: 236 YGTAWASKDDLKAYQERLAEAERRDHRKLGAELDLFSFPDELGSGLPVFHPRGGIIRKEM 295

Query: 280 ISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT--------IKD 330
             Y RR+  +  YE + TP +  QHL++ SGH D Y   MF     D+          + 
Sbjct: 296 EDYSRRRHTEAGYEFVYTPHITKQHLYEVSGHLDWYANGMFPPMHIDEVRDPETGEITRQ 355

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
            + + LKPMNCP H  ++    +SYRELP+RL EFGSVYR E SG +HGL RVRG TQDD
Sbjct: 356 GQNYYLKPMNCPMHNLIYRSRGRSYRELPLRLFEFGSVYRYEKSGVVHGLTRVRGMTQDD 415

Query: 391 AHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMK 449
           AH++CT+EQM  E     N ++ + KD+G     ++LST+  +  VGSD +W++A   + 
Sbjct: 416 AHIYCTREQMKEELTTTLNFVLDLLKDYGLNDFHLELSTKDPEKFVGSDEIWEEATRTLA 475

Query: 450 GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAF 509
            V +         +      G  AFYGPK     +DAIGR WQ  TIQ+DFNLP RF+  
Sbjct: 476 EVAEASG------LQLVPDPGGAAFYGPKISVQARDAIGRTWQMSTIQLDFNLPERFDLE 529

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQ 569
           Y  +   +  PVMIHRA+FGSIERF+G++ E++ G  P WL+P Q +   +  +  +Y  
Sbjct: 530 YQAADGTRQRPVMIHRALFGSIERFLGVLTEHYAGAFPAWLAPEQVVAIPVAEAFNDYLD 589

Query: 570 EIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           ++   L++  +    D  ++    KIR  + +K P ++I G ++    ++  R    T  
Sbjct: 590 DVVAKLRAEGIRARLDDSSDRFPKKIRTAAKEKAPFVLIAGGEDREAGAVSFRFRDGTQD 649

Query: 630 QKVSLLDAIPILTK 643
             V + +AI  + K
Sbjct: 650 NGVPVEEAIERIVK 663


>gi|170290551|ref|YP_001737367.1| threonyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum OPF8]
 gi|170174631|gb|ACB07684.1| threonyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum OPF8]
          Length = 638

 Score =  560 bits (1443), Expect = e-157,   Method: Composition-based stats.
 Identities = 253/658 (38%), Positives = 393/658 (59%), Gaps = 30/658 (4%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE--GSIEI 61
            +K+  PDG+  N        DV   I R +    +    +G++ DLS  + +  G I +
Sbjct: 1   MVKVIMPDGTTLNAEEGKRILDV---IPRGIG---LIAEASGRLLDLSTVISDDLGEIRV 54

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELA 120
           +            H+ +HI+A+AV+ ++ E ++ IGP IE+GFYY+FD   + FS ++L 
Sbjct: 55  LDFNSREGREAYWHTTSHILAQAVKRLFKEAKLGIGPPIEEGFYYEFDLGGKTFSQEDLE 114

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IE++M+ I+  D   +++ +  E+A  LF    E YKVE+LE I  +  V++YRQGE+F
Sbjct: 115 LIEEEMRRIVEEDIEIVREEMRREEAIALFREAGEPYKVELLEEI-EEPVVSIYRQGEFF 173

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ STG VK + KL++V+ +YWRGD   P++ R+YG ++ +++ L ++L   EE
Sbjct: 174 DLCRGPHLPSTGYVK-YMKLLQVSSSYWRGDERNPVMQRVYGISFPSKEMLEEFLVRREE 232

Query: 241 SEKRDHRKLAREMDLFHIAED--GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTP 297
             KRDHR +  ++DLF +  +  G G+I WH KG ++ + +  ++ R  +   YE + +P
Sbjct: 233 IRKRDHRVVGPQLDLFSMPSEIIGPGLILWHPKGARVRRIIEDFLVRVHLSRGYELVYSP 292

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW+ SGH + YR  M+  +      K+    A+KPMNCP H+ ++N   +SYRE
Sbjct: 293 HIAYSTLWKISGHLNYYRDYMYVFE------KEGIEHAVKPMNCPFHILIYNSKRRSYRE 346

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+RL E G+VYR E SG LHGL+R RGFTQDDAH+F T+E + +E L + +L   + + 
Sbjct: 347 LPLRLFELGTVYRFEKSGVLHGLLRARGFTQDDAHIFTTREDLEDEVLGLIDLNEYLMRS 406

Query: 418 FGFEKIMVKLS----TRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           FGFE++ V++S     R  + +GSD  W  A++ ++G L              ++ GE A
Sbjct: 407 FGFEELKVEISTWDPRRRSEYMGSDEDWSAAQSSLEGALRRKGYR------YEIMEGEAA 460

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  L D+IGR+WQ  TIQ+DFNLP RF+  YV +   + H VMIHRA+ GSIER
Sbjct: 461 FYGPKIDMKLVDSIGREWQLSTIQIDFNLPRRFDLKYVKADGSEEHIVMIHRALLGSIER 520

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           F GI++E++ GN PLW++PIQ  +  ++ +    A+E+  L+ +  +  +      T++Y
Sbjct: 521 FFGILLEHYAGNFPLWIAPIQLRILPVSQAQEGRAEELLALMSARGVRADIRKAESTLSY 580

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           +IRE  ++KIPI+ I G++E     I +R  G      +SL D      KE LPPD +
Sbjct: 581 RIRESELEKIPIVAIIGEREMKTGEISVRVKGKGNLGSMSLEDFFRTFGKELLPPDMR 638


>gi|224002114|ref|XP_002290729.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220974151|gb|EED92481.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 791

 Score =  560 bits (1443), Expect = e-157,   Method: Composition-based stats.
 Identities = 219/704 (31%), Positives = 349/704 (49%), Gaps = 77/704 (10%)

Query: 2   PSDIKLTFPDGSI--------KNFPVHATGSDVAESISRSLAKKAVAVAI---------- 43
           P DI++T PDG +        K      T  DVA +I+R LA       +          
Sbjct: 97  PVDIEVTLPDGKVLSEDKEGVKYQAWRTTPFDVAATIARGLADNTSVARVTYTAYVSDYN 156

Query: 44  ---NGK---------------------------VCDLSDPV--REGSIEIITPEDP-RSL 70
              +G                            + D++ P+      +E +  ED   + 
Sbjct: 157 PEEDGMGGVDTLAESMAELEINDADEDKSKLTMLWDMTRPLVGSVSKMEFLKFEDDVDAR 216

Query: 71  AVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFS-----SDELAQIEKK 125
            V  HS AH+M EA++ ++   ++ IGP +  GFYYD       S      ++   +E +
Sbjct: 217 TVFWHSSAHVMGEALERLY-GSRLTIGPPLAGGFYYDSYMGDSSSDGALKEEDYKPVEAE 275

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE-SIPAKENVTLYRQGEWFDLCR 184
           +Q+I+     F +  ++ E+A ++       +K +I+   I      T+YR G+  DLCR
Sbjct: 276 VQKIVKSKQKFERLVVTKEEALDM--FAGNPFKEQIISTKIADGSRTTVYRCGDLVDLCR 333

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +TG++K F          W GD++   L R+YG ++  ++ L  +    E++++R
Sbjct: 334 GPHVPNTGRIKAFAATRHS-ATNWLGDTDNDSLQRMYGISFPDKKMLKVWQENQEKAKER 392

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHR++A++ DL    E  +G  FW   G +I+  LI +++       Y+EI TP + +  
Sbjct: 393 DHRRIAQQQDLVMFHELSAGSAFWLPHGARIYNKLIEFIKEHYWRRGYDEIITPNIYNLD 452

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW QSGH   Y+  MF          + + +A+KPMNCPGH  +F   ++SYR+LP+R A
Sbjct: 453 LWHQSGHAMHYKDAMFCFDV------EGKEWAMKPMNCPGHCLMFAGKIRSYRDLPIRFA 506

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           +FG ++RNE SG+L GL RVR F QDDAH++C ++Q+ +E L   + + S+Y  FG    
Sbjct: 507 DFGVLHRNELSGALSGLTRVRRFQQDDAHIYCREDQIEDEVLGALDFMKSVYDTFGMTYK 566

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           + +LSTRP K +G   LWD AE  +   +DT       R       G+GAFYGPK +  +
Sbjct: 567 L-ELSTRPAKALGDKELWDRAEAALARAMDTFAGKGGWR----ENPGDGAFYGPKIDIKV 621

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC----HPVMIHRAVFGSIERFIGIMI 539
            DA+ R  QC T+Q+DF LP RF   Y     EK      PVM+HRA+ GS+ER   ++ 
Sbjct: 622 MDAMERVHQCATVQLDFQLPIRFGLEYNTGSKEKGSEFARPVMVHRAMLGSVERMFAVLC 681

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E++ G  PLWLSP Q +V  I     +Y+Q + + L +     + D    T   K+R   
Sbjct: 682 EHYGGKWPLWLSPRQVMVVPIHKDWNDYSQGVRDKLHAEGFYADVDLSKATFQKKVRNAQ 741

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +++    ++ G+ E    ++ IR   +    +  + + I  L +
Sbjct: 742 VEQYNFQLVVGEAEVKNDTVNIRTRDNKVEGEKKVDELIEYLKQ 785


>gi|117928565|ref|YP_873116.1| threonyl-tRNA synthetase [Acidothermus cellulolyticus 11B]
 gi|117649028|gb|ABK53130.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Acidothermus
           cellulolyticus 11B]
          Length = 685

 Score =  560 bits (1442), Expect = e-157,   Method: Composition-based stats.
 Identities = 246/656 (37%), Positives = 370/656 (56%), Gaps = 43/656 (6%)

Query: 12  GSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPEDPRSL 70
           G  +  PV AT + + +       +  +AV ING + DL+  + +G  +E +  + P   
Sbjct: 41  GEPREVPVGATAATLFDD------RAVIAVRINGVLRDLATVLADGDEVEPVRIDTPDGR 94

Query: 71  AVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEII 130
           +++RHS AH++A+AVQ+++P  ++ IGP IE+GFYYDFD  QPF+ D+L +IE++M++II
Sbjct: 95  SILRHSTAHVLAQAVQALFPGTRLGIGPPIENGFYYDFDTAQPFTPDDLRRIEQRMRDII 154

Query: 131 ARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPA------------KENVTLYRQGE 178
                F ++ ++ E+AR   E   E YK+E++    A             E +T+Y    
Sbjct: 155 REGQIFRRRVVTDEQAR--TELAGEPYKLELISVKSAAADTEGAGAEIGGEELTIYDNLR 212

Query: 179 ------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELT 232
                 W DLCRGPH+ ST  +  F    + A AYWRG    P L RIYGTAW ++  L 
Sbjct: 213 PDGSLAWKDLCRGPHLPSTRHIPAFTLT-RTAAAYWRGRETNPQLQRIYGTAWESRDALQ 271

Query: 233 QYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDD 290
           +YL  L E+E+RDHR+L  E+DLF   ++ GSG+  +H KG  I + + +Y R +  K  
Sbjct: 272 KYLDLLREAERRDHRRLGVELDLFSFPDEIGSGLAVFHPKGGIIRREMENYSRLQHEKAG 331

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH 350
           Y  +NTP +    L+  SGH  S+   MF     D       T+ LKPMNCP H+ ++  
Sbjct: 332 YLFVNTPHITKHDLFATSGHLQSFAEGMFPPFELDG----GVTYYLKPMNCPMHILIYRS 387

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
             +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDDAH+FCT+EQM  E   +   
Sbjct: 388 RGRSYRELPMRLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIFCTREQMGAELRDLLRF 447

Query: 411 IISIYKDFGFEKIMVKLSTRP--EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
           ++ + +D+G     ++LSTR    K VG  A W  A   ++             +     
Sbjct: 448 VLDLLRDYGLTDFYLELSTRDDSPKFVGDPADWAQATEALEAAARDSG------LELVPD 501

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
            G  A+YGPK     +DAIGR WQ  TIQ+DFNLP RF+  Y  +   +  PVMIHRA+F
Sbjct: 502 PGGAAYYGPKISVQARDAIGRSWQISTIQLDFNLPKRFDLEYQAADGTRQRPVMIHRALF 561

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQE-IANLLKSHHLSIETDFR 587
           GSIERF G+++E++ G  P WL+P+QA+   ++ + V Y ++ +   L++  +  E D  
Sbjct: 562 GSIERFFGVLLEHYAGAFPPWLAPVQAVGIPVSDAHVPYLRDTVGASLRAAGIRYEVDDS 621

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           ++ +  KIR  + +KIP ++I GD + +  ++  R    +    V + DA+  +  
Sbjct: 622 DDRMQKKIRNAAKQKIPYLLIAGDDDIARHAVSFRYRDGSQKNGVPIADAVAEIRD 677


>gi|269302597|gb|ACZ32697.1| threonyl-tRNA synthetase [Chlamydophila pneumoniae LPCoLN]
          Length = 635

 Score =  560 bits (1442), Expect = e-157,   Method: Composition-based stats.
 Identities = 249/644 (38%), Positives = 372/644 (57%), Gaps = 20/644 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEII 62
            I++T  D          T +++A+ +  S   + + V IN +  DLS  + EG ++  +
Sbjct: 1   MIQVTC-DQKNYEVLEGTTAAELAKQLKNS--HQFIGVLINERPRDLSTHLNEGDTLVFL 57

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T EDP    +  H+ AH++A+AV  +WP+    IGP+I+ GFYYDF      S  +   I
Sbjct: 58  TSEDPEGREIFLHTSAHLLAQAVLRLWPDAIPTIGPVIDHGFYYDFA-NLSISESDFPLI 116

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E  +++I+       +     +K + L +  +  +K E++  +P  E ++ Y QGE+FDL
Sbjct: 117 EDTVKQIVDEKLTISRFTYG-DKQQALAQFPQNPFKTELIRELPENEEISAYSQGEFFDL 175

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ ST  VK F K+++ + AYWRGD +R  L RIYGT++ T +EL  +L  +EE++
Sbjct: 176 CRGPHLPSTAHVKAF-KVLRTSAAYWRGDPSRESLVRIYGTSFPTSKELRAHLEQIEEAK 234

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KRDHR L  ++DLF   E   G+ F+H +G  ++  LI Y ++      Y+EI TPQ+++
Sbjct: 235 KRDHRVLGAKLDLFSQQESSPGMPFFHPRGMIVWDALIRYWKQLHTAAGYKEILTPQLMN 294

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHWD+Y+ANM+ ++       D   +A+KPMNCPG +  +   L SY+E P+R
Sbjct: 295 RQLWEVSGHWDNYKANMYTLQI------DDEDYAIKPMNCPGCMLYYKTRLHSYKEFPLR 348

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AE G V+R E SG+L GLMRVR F QDDAHVF T EQ+  E L I  L+ ++Y  FG E
Sbjct: 349 VAEIGHVHRQEASGALSGLMRVRAFHQDDAHVFLTPEQVEEETLNILQLVSTLYGTFGLE 408

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
             +   +   +  +G D+LW+ A + +   L       Q      V  GEGAFYGPK + 
Sbjct: 409 YHLELSTRPEKDTIGDDSLWELATDALNRAL------VQSGTPFIVRPGEGAFYGPKIDI 462

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDAI R WQCGTIQ+D  LP RF   Y  +   K  PVM+HRA+FGSIERF+GI+IEN
Sbjct: 463 HVKDAIQRTWQCGTIQLDMFLPERFELEYTTAQGTKSVPVMLHRALFGSIERFLGILIEN 522

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           FKG  PLWLSP Q  + T+    +  A+E+    K   L +  D  +E+++ KIR     
Sbjct: 523 FKGRFPLWLSPEQVRIITVADRHIPGAKELEEAWKRLGLVVTLDDSSESVSKKIRNAQNM 582

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           ++  +I  GD E +E  + +R   +     VS+   +  + +E 
Sbjct: 583 QVNYMITLGDHEINENVLAVRTRDNRVINDVSVERFLNTILEEK 626


>gi|156086662|ref|XP_001610740.1| threonyl-tRNA synthetase [Babesia bovis T2Bo]
 gi|154797993|gb|EDO07172.1| threonyl-tRNA synthetase, putative [Babesia bovis]
          Length = 736

 Score =  560 bits (1442), Expect = e-157,   Method: Composition-based stats.
 Identities = 229/679 (33%), Positives = 354/679 (52%), Gaps = 54/679 (7%)

Query: 5   IKLTFPDGSIKNFPVH---ATGSDVAESISRSLAKKAVAVAI---------------NGK 46
           I L  PD  ++           +D+ + +S+S ++  +   I               +G+
Sbjct: 60  INLEIPDKHVEPITGKSWLTCPADLLKHLSKSESQGIIVAEIRPSTKLVEHVADIEGDGE 119

Query: 47  ------VCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPI 99
                 + DL  P+  + ++   T E P+   V  HS AH++  A+++++    + IGP 
Sbjct: 120 YTDEWLMWDLYRPLECDCTVRFHTFESPKGQHVFWHSSAHLLGSALETLY-GAYITIGPA 178

Query: 100 IEDGFYYDFD-KEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYK 158
           +  GFYYD       F  D++A I +++  +    SPF +   S E+A EL +     +K
Sbjct: 179 LSQGFYYDCYLGNNTFKPDDMALITEQVSTVTKTKSPFQRLVCSKEEALELMK--HNPFK 236

Query: 159 VEIL-ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKK-FFKLMKVAGAYWRGDSNRPM 216
           VE++ + +P   +   YR G++ DLCRGPH+  T  V      + K +  YW   +    
Sbjct: 237 VELIRKKVPDGSSTVCYRCGDFVDLCRGPHLPFTTSVHHKAMTVTKFSSCYWLSKNTADS 296

Query: 217 LSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSG-VIFWHRKGWKI 275
           L R+YG ++  + +L  Y   +E+++  DHR L   ++LFH     S    FW   G KI
Sbjct: 297 LQRVYGISFPKEAQLKAYERRIEDAKANDHRLLGTTLNLFHFDNIHSPGSCFWLPNGAKI 356

Query: 276 FQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           +  L+ +MR   +   Y+E+ TP +    LW+ SGH+D+Y+ NM+          D   +
Sbjct: 357 YNRLVDFMRENYRLRGYQEVITPNIYSCELWKTSGHYDNYKENMYMFTV------DEAEW 410

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
            +K MNCPGH  +F H   SYR+LP+R A+FG ++RNE +GSL GL RVR F QDDAH+F
Sbjct: 411 GMKGMNCPGHCLMFKHMNPSYRQLPLRFADFGVLHRNELTGSLSGLTRVRRFQQDDAHIF 470

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDT 454
           CT EQ+  E L +   I  +Y  F FE    KLST+P K +G D LW+ AE  ++  L+ 
Sbjct: 471 CTPEQISAEVLSMLKFIDDVYSLFNFEYN-FKLSTKPAKALGDDELWNKAEAGLQDALEK 529

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH 514
                       +  G+GAFYGPK + IL D++ R+ QCGT+Q+DFNLP RFN  Y +  
Sbjct: 530 CGRPW------TLNPGDGAFYGPKIDVILLDSLEREHQCGTVQLDFNLPIRFNLGYRDKD 583

Query: 515 SEK--------CHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVE 566
           SE           PV++HRA+FGS+ERFI I+IE+ KG LP WLSP Q  V  I+   ++
Sbjct: 584 SEDNTDCKRGYSRPVIVHRAIFGSLERFIAIVIEHMKGKLPFWLSPTQVAVLPISDKHLD 643

Query: 567 YAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS 626
           YA +I   L     +   D    T+N KI+ +  ++   ++I GD+E    ++ +R   S
Sbjct: 644 YANKIYRKLLHLGYNCYVDSSANTMNKKIKLNQAQRYNYMLILGDREVETETVSVRAMDS 703

Query: 627 TTTQKVSLLDAIPILTKES 645
              + ++L      L  E+
Sbjct: 704 QDNEVLTLEQLYAKLADEA 722


>gi|307326749|ref|ZP_07605941.1| threonyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113]
 gi|306887512|gb|EFN18506.1| threonyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113]
          Length = 659

 Score =  560 bits (1442), Expect = e-157,   Method: Composition-based stats.
 Identities = 257/666 (38%), Positives = 375/666 (56%), Gaps = 41/666 (6%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSD-PVREGSIEI 61
           SD+++     S +   V ATG+  A+  S    +  VAV + G++ DL+  P     IE 
Sbjct: 2   SDVRVIIQRDSEREERVVATGTTTADVFSGD--RSIVAVRVGGQLKDLAYQPAEGDEIEP 59

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +       L ++RHS AH+MA+AVQ ++P+ ++ IGP I+DGFYYDFD E PF  D+L +
Sbjct: 60  VEITSKDGLDILRHSTAHVMAQAVQELFPDAKLGIGPPIKDGFYYDFDVETPFHPDDLKR 119

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-------------ESIPAK 168
           IEKKMQEI  R   F ++ ++ ++ARE  E   E YK+E++              +    
Sbjct: 120 IEKKMQEIQKRGQRFSRRAVTDDEARE--ELSAEPYKLELIGLKGSAADAAEGASAEVGA 177

Query: 169 ENVTLYRQGE-------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIY 221
             +T+Y   +       W DLCRGPH+ +T  +  F KLM+ A AYWRG    P L RIY
Sbjct: 178 GELTIYDNLDAKSGELCWKDLCRGPHLPTTRNIPAF-KLMRSAAAYWRGSEKNPQLQRIY 236

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLI 280
           GTAW T+ EL  YL FL E+EKRDHRKL  E+DLF   ++ GSG+  +H KG  I + + 
Sbjct: 237 GTAWPTKDELKAYLDFLAEAEKRDHRKLGAELDLFSFPDELGSGLAVFHPKGGVIRKEME 296

Query: 281 SYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPM 339
            Y R++  +  YE +NTP +    L++ SGH   Y   MF          + + + LK M
Sbjct: 297 EYSRKRHDESGYEFVNTPHITKARLFETSGHLPHYMDGMFPPMEF-----EGQDYYLKAM 351

Query: 340 NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQ 399
           NCP H  +F    +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDD+H++CTKEQ
Sbjct: 352 NCPMHNLIFRARGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDSHIYCTKEQ 411

Query: 400 MFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE--KRVGSDALWDDAENIMKGVLDTIKN 457
           M +E   +   ++ + +D+G     ++LSTR +  K +G    W++A   ++   +    
Sbjct: 412 MADELDNLLTFVLDLLRDYGLNDFYLELSTRDDSDKFIGGPEQWEEATEELRKAAE---- 467

Query: 458 SSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK 517
             +  +   +  G  AFYGPK     +DAIGR WQ  TIQVDFN P RF   Y  +   +
Sbjct: 468 --KQGLELVMDPGGAAFYGPKISVQARDAIGRTWQMSTIQVDFNQPERFELEYTAADGSR 525

Query: 518 CHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKS 577
             PVMIHRA+FGSIERF  +++E++ G  P WL+P+QA+   I    V Y +E A   K+
Sbjct: 526 QQPVMIHRALFGSIERFFAVLLEHYAGAFPAWLAPVQAVGIPIGDGHVPYLEEFAAQAKA 585

Query: 578 HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
             L +E D  ++ +  KIR     KIP ++I GD++ +  ++  R    +    + + +A
Sbjct: 586 KGLRMEVDSSSDRMQKKIRNAQKSKIPFMVIVGDEDVTNNAVSFRYRDGSQKNGIPIDEA 645

Query: 638 IPILTK 643
           +  +  
Sbjct: 646 LAEIAD 651


>gi|219682056|ref|YP_002468440.1| threonyl-tRNA synthetase [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|254783513|sp|B8D730|SYT_BUCAT RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|219621789|gb|ACL29945.1| threonyl-tRNA synthetase [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|311085869|gb|ADP65951.1| threonyl-tRNA synthetase [Buchnera aphidicola str. LL01
           (Acyrthosiphon pisum)]
 gi|311086439|gb|ADP66520.1| threonyl-tRNA synthetase [Buchnera aphidicola str. TLW03
           (Acyrthosiphon pisum)]
 gi|311087022|gb|ADP67102.1| threonyl-tRNA synthetase [Buchnera aphidicola str. JF99
           (Acyrthosiphon pisum)]
 gi|311087587|gb|ADP67666.1| threonyl-tRNA synthetase [Buchnera aphidicola str. JF98
           (Acyrthosiphon pisum)]
          Length = 642

 Score =  560 bits (1442), Expect = e-157,   Method: Composition-based stats.
 Identities = 286/649 (44%), Positives = 431/649 (66%), Gaps = 19/649 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
           MP    + F DGS + +    +  ++ ++   S+ K  +A+++N    +L+  +RE + I
Sbjct: 1   MPV---IRFYDGSQQVYEHSVSLIEIIKNKKPSIMKSLIAISVNNHFSNLNTFIREDAFI 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           E +  ++ ++L +IR+SCA +++ A+++IWP  Q+A   IIEDGFY D D ++  S  +L
Sbjct: 58  EFVDQKNYKALNIIRYSCAQLLSYAIKNIWPLAQIATSNIIEDGFYCDIDFKRSISEKDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +E +M+ ++ R+   L + +S+ +ARE+F+   E YKV ++ E+I     V+LY    
Sbjct: 118 ILLENQMKTLVKREYNILNKLISYSEAREIFQKCFEKYKVSLIDENIHCNSKVSLYYHEN 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+  G  V +    K F KL K+ G YW+ + N  ML RIYGTAW  +QEL ++L +L
Sbjct: 178 YADIDIGLQVFNIKFCKYF-KLQKIGGVYWKKNKNNKMLQRIYGTAWTNKQELDKHLDYL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
            E EKRDHRK+ + + L+H+ E+  G+IFWH KGW IF  L +++R K+K+  YEE+ TP
Sbjct: 237 NELEKRDHRKIGKFLQLYHMQEESPGMIFWHNKGWIIFNELQNFVRVKLKEYKYEEVKTP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ +W+QSGHWD+Y+  +F       T+ + R + +KPMNCPGHV +FN  LKSYR+
Sbjct: 297 LLIDKLIWKQSGHWDNYKNAIFT------TLSEHREYCIKPMNCPGHVQIFNSRLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSGSLHGLMRVR FTQDDAH+FCT+EQ+ +E      +I  +Y  
Sbjct: 351 LPIRMAEFGSCHRNEPSGSLHGLMRVRNFTQDDAHIFCTREQVRSEINDCIKMIYDLYST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           F F+KI+VKLSTRPEKR+G+D+LW+++E  +  +L       ++ ++     GEGAFYGP
Sbjct: 411 FHFKKILVKLSTRPEKRIGTDSLWNESEKDLSDMLI------ENHLSFEYQSGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+IL+D++ R+WQCGTIQ+DF LP R ++FY+N  +EK  PV+IHRA+ GSIERFIGI
Sbjct: 465 KIEFILQDSLDRNWQCGTIQLDFYLPLRLSSFYINEKNEKKVPVIIHRAILGSIERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE   GNLP WLSP+Q ++ +IT  +  Y +E+       ++ IE D RNE I +KIRE
Sbjct: 525 LIEECSGNLPTWLSPVQVVIISITDISSGYVKELFKKFSDVNIRIECDLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           H++++IP I+ICG+KE+S + I +R         + +   I  L KE +
Sbjct: 585 HTLRRIPYILICGEKESSSKKISVRNRQGHNFGMIDVDFFIKKLQKEII 633


>gi|238504300|ref|XP_002383381.1| threonyl-tRNA synthetase, putative [Aspergillus flavus NRRL3357]
 gi|317138130|ref|XP_001816697.2| threonyl-tRNA synthetase, cytoplasmic [Aspergillus oryzae RIB40]
 gi|220690852|gb|EED47201.1| threonyl-tRNA synthetase, putative [Aspergillus flavus NRRL3357]
          Length = 721

 Score =  560 bits (1442), Expect = e-157,   Method: Composition-based stats.
 Identities = 222/674 (32%), Positives = 361/674 (53%), Gaps = 51/674 (7%)

Query: 4   DIKLTFP--DGSIKNF---PVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EG 57
           +I +T    +G+ +         T + + +++ + L+   V   ++ ++ DLS P+  + 
Sbjct: 52  EITVTLQPGNGNKEQVSAKAWETTPAQLLKNVPKELSATIVLAKVDNELWDLSRPLEGDC 111

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK--EQPFS 115
           ++  +  EDP    V  HS AH + EA +  +    ++ GP    GF+YD      +   
Sbjct: 112 TVSYVRFEDPEGREVFWHSSAHCLGEACECEY-GCLLSHGPPTPQGFFYDMAMPDNRVVR 170

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
             +   ++K    +      F +  ++ E  +++F   K  YK+  ++ +   E  T+YR
Sbjct: 171 ETDWPALDKHANRVFKEKQSFDRLEVTKENLKKMFAYSK--YKLHYIDKLVTGEKSTVYR 228

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
            G   DLCRGPH+++TG++K F K+M+ + AY+ GD +   L RI G A+  ++++ ++L
Sbjct: 229 CGTLVDLCRGPHIQNTGKIKTF-KIMQNSSAYFLGDQSNDSLQRIRGVAFPDKKQMQEHL 287

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEI 294
            FLEE+EKR+H K+ +E +LF   E   G  F    G KIF  L + +R + +   Y+E+
Sbjct: 288 KFLEEAEKRNHVKIGKEQELFFFDEVSPGCPFLLPNGTKIFNALQTLLRSEYRKRGYQEV 347

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
            TP + D  +W+ SGHW  Y+ +MF +        + R +ALKPMNCPGH  +F H  +S
Sbjct: 348 QTPNMYDVGIWKTSGHWAHYKDDMFKLDV------EKREWALKPMNCPGHFVLFGHRERS 401

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YRELP+RLA+FG ++RNE SG+L GL RVR F QDD H+FCT++Q+ +E   + + + SI
Sbjct: 402 YRELPLRLADFGVLHRNEASGALSGLTRVRKFQQDDTHIFCTQDQITSEIEGLFDFLQSI 461

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           Y  FGF   + KLSTRPEK +G    W+ AE  +K  +   K       +  +  G+GAF
Sbjct: 462 YGLFGFTFKL-KLSTRPEKYLGELETWNYAEEQLKAAMTKFKGD-----DWTIDEGDGAF 515

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC---------------- 518
           YGPK +  + DA+ R++QC TIQ+D+  P  F   Y+++                     
Sbjct: 516 YGPKIDITIADALKREFQCATIQLDYQAPINFKLEYMSNEKADKSQAAAESAEGENKSSE 575

Query: 519 ------HPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIA 572
                  PV+IHRA+ GS ERF+GI+ E+F G  P W+SP Q ++  +  +  +Y +E+ 
Sbjct: 576 PGPGRARPVVIHRAIIGSFERFLGILTEHFGGKWPFWISPRQILIVPVMPAVNDYVEELQ 635

Query: 573 NLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK- 631
            +L+   L+++ D    T+  KIR   + +   I + G +E   R++ IR      TQK 
Sbjct: 636 TILRGDKLNVDIDISGNTMQKKIRTGQLAQYNFIFVVGAQEKEARTVNIRNRDDPATQKQ 695

Query: 632 ---VSLLDAIPILT 642
              + L +A   L 
Sbjct: 696 GVMIPLEEAREKLR 709


>gi|15618715|ref|NP_225001.1| threonyl-tRNA synthetase [Chlamydophila pneumoniae CWL029]
 gi|15836339|ref|NP_300863.1| threonyl-tRNA synthetase [Chlamydophila pneumoniae J138]
 gi|16752234|ref|NP_445602.1| threonyl-tRNA synthetase [Chlamydophila pneumoniae AR39]
 gi|33242166|ref|NP_877107.1| threonyl-tRNA synthetase [Chlamydophila pneumoniae TW-183]
 gi|8928382|sp|Q9Z7A0|SYT_CHLPN RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|4377117|gb|AAD18944.1| Threonyl tRNA Synthetase [Chlamydophila pneumoniae CWL029]
 gi|7189978|gb|AAF38837.1| threonyl-tRNA synthetase [Chlamydophila pneumoniae AR39]
 gi|8979180|dbj|BAA99014.1| threonyl tRNA synthetase [Chlamydophila pneumoniae J138]
 gi|33236677|gb|AAP98764.1| threonyl-tRNA synthetase [Chlamydophila pneumoniae TW-183]
          Length = 635

 Score =  560 bits (1442), Expect = e-157,   Method: Composition-based stats.
 Identities = 249/644 (38%), Positives = 372/644 (57%), Gaps = 20/644 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEII 62
            I++T  D          T +++A+ +  S   + + V IN +  DLS  + EG ++  +
Sbjct: 1   MIQVTC-DQKNYEVLEGTTAAELAKQLKNS--HQFIGVLINERPRDLSTHLNEGDTLVFL 57

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T EDP    +  H+ AH++A+AV  +WP+    IGP+I+ GFYYDF      S  +   I
Sbjct: 58  TSEDPEGREIFLHTSAHLLAQAVLRLWPDAIPTIGPVIDHGFYYDFA-NLSISESDFPLI 116

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E  +++I+       +     +K + L +  +  +K E++  +P  E ++ Y QGE+FDL
Sbjct: 117 EDTVKQIVDEKLAISRFTYG-DKQQALAQFPQNPFKTELIRELPENEEISAYSQGEFFDL 175

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPH+ ST  VK F K+++ + AYWRGD +R  L RIYGT++ T +EL  +L  +EE++
Sbjct: 176 CRGPHLPSTAHVKAF-KVLRTSAAYWRGDPSRESLVRIYGTSFPTSKELRAHLEQIEEAK 234

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KRDHR L  ++DLF   E   G+ F+H +G  ++  LI Y ++      Y+EI TPQ+++
Sbjct: 235 KRDHRVLGAKLDLFSQQESSPGMPFFHPRGMIVWDALIRYWKQLHTAAGYKEILTPQLMN 294

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHWD+Y+ANM+ ++       D   +A+KPMNCPG +  +   L SY+E P+R
Sbjct: 295 RQLWEVSGHWDNYKANMYTLQI------DDEDYAIKPMNCPGCMLYYKTRLHSYKEFPLR 348

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AE G V+R E SG+L GLMRVR F QDDAHVF T EQ+  E L I  L+ ++Y  FG E
Sbjct: 349 VAEVGHVHRQEASGALSGLMRVRAFHQDDAHVFLTPEQVEEETLNILQLVSTLYGTFGLE 408

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
             +   +   +  +G D+LW+ A + +   L       Q      V  GEGAFYGPK + 
Sbjct: 409 YHLELSTRPEKDTIGDDSLWELATDALNRAL------VQSGTPFIVRPGEGAFYGPKIDI 462

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDAI R WQCGTIQ+D  LP RF   Y  +   K  PVM+HRA+FGSIERF+GI+IEN
Sbjct: 463 HVKDAIQRTWQCGTIQLDMFLPERFELEYTTAQGTKSVPVMLHRALFGSIERFLGILIEN 522

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           FKG  PLWLSP Q  + T+    +  A+E+    K   L +  D  +E+++ KIR     
Sbjct: 523 FKGRFPLWLSPEQVRIITVADRHIPRAKELEEAWKRLGLVVTLDDSSESVSKKIRNAQNM 582

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           ++  +I  GD E +E  + +R   +     VS+   +  + +E 
Sbjct: 583 QVNYMITLGDHEINENVLAVRTRDNRVINDVSVERFLNTILEEK 626


>gi|149919496|ref|ZP_01907976.1| hypothetical protein PPSIR1_10610 [Plesiocystis pacifica SIR-1]
 gi|149819621|gb|EDM79048.1| hypothetical protein PPSIR1_10610 [Plesiocystis pacifica SIR-1]
          Length = 590

 Score =  560 bits (1442), Expect = e-157,   Method: Composition-based stats.
 Identities = 247/580 (42%), Positives = 362/580 (62%), Gaps = 14/580 (2%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           L  +RHS AH+MA+A++ +WP+ ++A GP  EDGFYYD   +   S D+   IE KM+ I
Sbjct: 23  LETLRHSAAHVMADAIKQLWPDAKLAFGPHTEDGFYYDIQMDHRLSPDDFPAIEDKMKAI 82

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
                PF ++ +S + AR LFE+  E +KVE + SIP    +TLYR G++ DLCRGPHV+
Sbjct: 83  AKARHPFEREEVSRDAARALFEAAGEDFKVETIASIPEDATLTLYRSGDFVDLCRGPHVK 142

Query: 190 STGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKL 249
            TG V+ F KL++VAGAYWRG+   PML R+YGTA+  +++L ++L  LEE++KRDHRKL
Sbjct: 143 ETGAVRAF-KLLRVAGAYWRGNEKGPMLQRLYGTAFADKKQLKKHLAALEEAKKRDHRKL 201

Query: 250 AREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQS 308
             E+ LFH         F+  +G  I+  L  Y+R+  +  DY E+ TPQ+ D  L++ S
Sbjct: 202 GVELGLFHFDPIAPASPFFTERGATIYNLLQEYVRKLYRKYDYGEVITPQIFDMELFRTS 261

Query: 309 GHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV 368
           GH+D Y+ NMF+ +       D R F +KPMNCPGH  ++    KSYRELP+R+A+FG +
Sbjct: 262 GHYDHYKDNMFSSEI------DNREFGVKPMNCPGHCVLYRQTRKSYRELPIRMADFGRL 315

Query: 369 YRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLS 428
           +R E +G  HGL RVR F QDDAHVFC  +Q+  E   + ++I+  Y+ FGFE + +++S
Sbjct: 316 HRYERAGVTHGLTRVRTFCQDDAHVFCRLDQLEQEIESVTSMILETYEAFGFEDVEIEIS 375

Query: 429 TRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIG 488
           TRP+  +G    WD AE  +  VL      ++  IN  +  G+GAFYGPK ++ ++DA+ 
Sbjct: 376 TRPDSYLGELETWDRAEKALADVL------TRQGINYAINEGDGAFYGPKIDFGVRDALR 429

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPL 548
           R WQ GT Q+DF LP RF   YV++   +  PVMIHRA+ GS+ERF G+ +E+  G  P 
Sbjct: 430 RPWQLGTCQLDFQLPERFKLEYVSADDARARPVMIHRAMLGSLERFFGVYLEHTAGKFPT 489

Query: 549 WLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIII 608
           WL+P+Q  +  IT +  E+A+++    K+  L + TD R+E +  KIRE ++ ++P +++
Sbjct: 490 WLAPVQIAILPITDAHAEWARKVEAACKAAGLRVTTDDRSEKLGLKIREATLLRVPYMLV 549

Query: 609 CGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
            GDKE   + +  R     T    SL D +  +  E   P
Sbjct: 550 LGDKEVEAQGVAPRTRDGKTGALESLEDFVARIAVEGSVP 589


>gi|225447618|ref|XP_002270988.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 670

 Score =  559 bits (1441), Expect = e-157,   Method: Composition-based stats.
 Identities = 260/586 (44%), Positives = 373/586 (63%), Gaps = 16/586 (2%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSD 117
            I + T E    L  IRH+CAH+MA AVQ ++P+ +V IGP IE+GFYYDFD E P +  
Sbjct: 87  KIVLPTNESSERLLRIRHTCAHVMAMAVQKLFPDAKVTIGPWIENGFYYDFDME-PLTDK 145

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +L +I+K+M  II R+ P +++ +S ++A+    +  E YK+EIL+SI        +  G
Sbjct: 146 DLKRIKKEMDRIIGRNLPLIREEVSRDEAQRRIMAVNEPYKMEILDSIQEDPITIYHIGG 205

Query: 178 EWFDLCRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           EW+DLC GPHV  TG + +K  +L  VAGAYWRGD  + ML RIYGTAW  +++L  YL+
Sbjct: 206 EWWDLCAGPHVEYTGNINRKAVELESVAGAYWRGDEKKQMLQRIYGTAWENEEQLKAYLH 265

Query: 237 FLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEI 294
           F EE+++RDHR+L +++DLF I ++ G G++FWH KG  +   +    ++  I+  Y+ +
Sbjct: 266 FKEEAKRRDHRRLGQDLDLFSIQDEAGGGLVFWHPKGAIVRHIIEDSWKKIHIEHGYDLL 325

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
            TP V    LW+ SGH D YR NM++    +D +     + L+PMNCP H+ ++   L S
Sbjct: 326 YTPHVARADLWKTSGHLDFYRENMYSQITIEDEL-----YQLRPMNCPYHILIYKRKLHS 380

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YR+ P+R+AE G+VYR E SGSLHGL RVRGFTQDDAH+FC ++Q+ +E   + +L   I
Sbjct: 381 YRDFPIRVAELGTVYRYELSGSLHGLFRVRGFTQDDAHIFCLEDQIKDEIRGVLDLTEEI 440

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
              FGF K  V LSTRPEK VG+D +W+ A + ++  LD    S        +  G GAF
Sbjct: 441 LLQFGFSKYEVNLSTRPEKAVGADDIWEKATSALRDALDDKGWS------YRIDEGGGAF 494

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  ++DA+GR WQC TIQVDFNLP RF+  YV+S+SEK  P+MIHRAV GS+ERF
Sbjct: 495 YGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDITYVDSNSEKQRPIMIHRAVLGSLERF 554

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
            G++IE++ G+ PLWLSPIQA V  +T + +EY  E+ N LK++ +  E     E +   
Sbjct: 555 FGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVTNKLKANGIRAEV-CHGERLPKL 613

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
           IR    ++IP++ + G KE   +++ +R         + + D I  
Sbjct: 614 IRNSEKQRIPLMAVVGPKEVETQTVTVRSRFGGELGTMIVEDFISR 659


>gi|168027962|ref|XP_001766498.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162682407|gb|EDQ68826.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 615

 Score =  559 bits (1441), Expect = e-157,   Method: Composition-based stats.
 Identities = 262/588 (44%), Positives = 374/588 (63%), Gaps = 17/588 (2%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           I + T E   +L  IRH+ AH++A AVQ ++PE QV IGP IE GFYYDFD ++ F+  +
Sbjct: 32  IVLPTNESSENLVKIRHTTAHVLAMAVQKLFPEAQVTIGPWIEKGFYYDFDMKEAFTEKD 91

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG- 177
           L +I+K+M  II+R+ P +++ +S E+A    ++  E YK+EILE I + E +T+YR G 
Sbjct: 92  LKKIKKEMDRIISRNLPLVREEVSREEAERRIKAINEPYKLEILEGIKS-EPITIYRIGE 150

Query: 178 EWFDLCRGPHVRSTGQ-VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           +W+DLC GPHV  TGQ  K+  +L  VAGAYWRGD    ML R+YGTAW T+++L  Y  
Sbjct: 151 DWWDLCAGPHVERTGQLNKRAIELESVAGAYWRGDEKNQMLQRVYGTAWETEEQLKAYQV 210

Query: 237 FLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEI 294
             EE+++RDHR+L ++++LF I ED G G++FWH KG  I   +  Y ++    + YE +
Sbjct: 211 QKEEAKRRDHRRLGQDLNLFSIQEDAGGGLVFWHPKGAMIRHIIEDYWKKMHFANGYELL 270

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
            TP +    LW+ SGH+D Y+ NMF     ++ +     + ++PMNCP H+ V+   L+S
Sbjct: 271 YTPHIAKLDLWKTSGHYDFYKENMFDQMQIEEEL-----YQIRPMNCPFHIQVYKDALRS 325

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YRELP+R+AE G+VYR E SG+LHGL RVRGFTQDD H+FC  +Q+ +E   + +L   I
Sbjct: 326 YRELPMRVAELGTVYRYERSGTLHGLFRVRGFTQDDGHIFCLPDQIRDEIRGVLDLTEMI 385

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            K FGF K  + LSTRPEK VGSD +W+ A   +K  L+            G+  G GAF
Sbjct: 386 LKQFGFSKFEINLSTRPEKAVGSDEIWEKATTALKSALED------KGWEYGIDEGGGAF 439

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  ++DAIGR WQC TIQVDFNLP RFN  YV+S + +  P+MIHRA+FGSIERF
Sbjct: 440 YGPKIDVKIEDAIGRKWQCSTIQVDFNLPERFNMVYVDSDTSRKQPIMIHRAIFGSIERF 499

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
            GI+ EN+ G+ PLWL+P+QA +  +T + V+Y +++   LK+  +  E  F  E +   
Sbjct: 500 FGILTENYAGDFPLWLAPVQARLLPVTDNEVDYCKKVVAELKAREIRAEVIF-GERLGKL 558

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           IR    +KIP++ + G KE    ++ +R         V++ D    + 
Sbjct: 559 IRNAETQKIPVMAVVGRKEVETETLTVRTRHGGELGNVTVADLADRIQ 606


>gi|126313772|ref|XP_001370758.1| PREDICTED: similar to Threonyl-tRNA synthetase-like 1 [Monodelphis
           domestica]
          Length = 717

 Score =  559 bits (1441), Expect = e-157,   Method: Composition-based stats.
 Identities = 218/657 (33%), Positives = 352/657 (53%), Gaps = 28/657 (4%)

Query: 14  IKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAV 72
           +       T   VA  IS +LA  AVA  +NG   D+  P+  +  I+ +T + P   A+
Sbjct: 69  VDAEAWSTTPYQVALQISSTLADTAVAARVNGVAYDMDRPLEGDADIDFLTFDSPEGKAL 128

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD--KEQPFSSDELAQIEKKMQEII 130
             HS AH++  A + +     +  GP    GFY+D      +     EL  +E+  Q I+
Sbjct: 129 FWHSSAHVLGAAAEHLL-SALLCRGPSTSCGFYHDIALQGNRTVRGSELPILEQTCQRIV 187

Query: 131 ARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRS 190
           A   PF +   S E+  +LF+     +K++++E    ++  T+Y  G   DLC+GPH+R 
Sbjct: 188 AAAHPFRRLVASREQLCQLFK--DNPFKLQLIEDKVKEQMATVYGCGTSVDLCKGPHLRH 245

Query: 191 TGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLA 250
           TGQ+     L   + ++      +  L R+YG ++ T + L  +    EE+  RDHR++ 
Sbjct: 246 TGQIGVLKLLTNSSSSWIGSSGVQEPLQRVYGISFPTSEGLRAWEKQREEAAARDHRRIG 305

Query: 251 REMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSG 309
           ++ +LF   E   G  F+  +G +++  L++++R +  +  + E+ TP +    LW+QSG
Sbjct: 306 KDQELFFFHELSPGSCFFLPRGTRVYNALMTFIRDEYARRGFSEVRTPTLFSTKLWEQSG 365

Query: 310 HWDSYRANMFAVKCADD-----------TIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           HW  Y  +MF ++  D            T       ALKPMNCP H  +F H  +S+REL
Sbjct: 366 HWKHYSGDMFVLRPPDPDGPADCQNNCSTNHPQSMLALKPMNCPAHCLIFAHRPRSWREL 425

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLA+FG+++R E SG L GL R+R F QDDAH+FC ++Q+ +E     + + S+Y  F
Sbjct: 426 PLRLADFGALHRTEASGGLGGLTRLRRFQQDDAHIFCAQDQLESEIRGCLDFLRSVYTVF 485

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF   +V LSTRP   +G   LWD AE I++  LD             +  G+GAFYGPK
Sbjct: 486 GFSFHLV-LSTRPSSFLGESFLWDQAEQILQQALDEFGEPWD------LNPGDGAFYGPK 538

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +  ++DA+GR  QCGTIQ+DF LP RF   Y+        PV+IHRAV GS+ER +G++
Sbjct: 539 IDVHIQDALGRPHQCGTIQLDFQLPLRFGLQYMGQAGVLERPVLIHRAVLGSVERMLGVL 598

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FRNETINYKIRE 597
            EN+ G  PLWLSP+QA+V  + +    YA+E+   L++  L+ + D   + T++ ++R 
Sbjct: 599 TENYGGKWPLWLSPLQAMVIPVGAEQEGYAREVQEALQAAGLAGDLDKDPSLTLSRRVRR 658

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK--ESLPPDCQK 652
             + +     + G +E S  ++ IR   S    +  + +A+  L +  ++  P+ ++
Sbjct: 659 AQLSQYNFQFVVGPREQSRGTVNIRTRDSGQLGERPVAEAVVRLRELRDARVPNAEE 715


>gi|306818771|ref|ZP_07452493.1| threonine--tRNA ligase [Mobiluncus mulieris ATCC 35239]
 gi|304648457|gb|EFM45760.1| threonine--tRNA ligase [Mobiluncus mulieris ATCC 35239]
          Length = 692

 Score =  559 bits (1441), Expect = e-157,   Method: Composition-based stats.
 Identities = 251/674 (37%), Positives = 377/674 (55%), Gaps = 48/674 (7%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEII 62
            I +   DG         TG D+         K+ +A  ING+  DL   + EG ++E I
Sbjct: 25  SISVVI-DGKATTIAEDQTGQDIYRD-----RKEVIACFINGEPRDLYRNLHEGDALEAI 78

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +    L ++RHS  H+MA+AV+ + P+V+  IGP IE+GFYYDF   QPF+ ++L +I
Sbjct: 79  TIDSEMGLNILRHSATHVMAQAVKQVRPDVKYGIGPFIENGFYYDFGVAQPFTPEDLKEI 138

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-------------------- 162
           EK M  I   D  F+++ ++ ++AR+  E   + YK+E++                    
Sbjct: 139 EKYMARICKEDQRFVRRAVTEDEARQ--ELADQPYKLELIGLKGGSDEDNDQAAAGASVE 196

Query: 163 ---ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSR 219
                +   +NV    +  W DLCRGPH+ ST  +   FKL+KV+ AYWRGD     L R
Sbjct: 197 VGGAELTIYDNVRKNGETAWKDLCRGPHIPSTRLLSGAFKLLKVSAAYWRGDQKNDSLQR 256

Query: 220 IYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQT 278
           IYGTAW T++EL  Y+  LEE+EKRDHR+L  E+DLF   E+ GSG+  +H KG  +   
Sbjct: 257 IYGTAWPTKEELKAYVTRLEEAEKRDHRRLGTELDLFSFPEEIGSGLPVFHPKGALVRME 316

Query: 279 LISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT-------IKD 330
           + +Y R R +++ Y  ++TP V    L++ SGH   Y+  MF     D+         K+
Sbjct: 317 MENYSRQRHLEEGYSFVSTPHVTKGQLFETSGHLSWYKEGMFPAMHLDEERDAQGNVTKE 376

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
              + LKPMNCP H  +F    +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDD
Sbjct: 377 GADYYLKPMNCPMHNLIFKSRTRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDD 436

Query: 391 AHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMK 449
           +H++CT++QM +E  K+   ++ + KD+G +   ++LST+  +  VGSD +W++A   ++
Sbjct: 437 SHIYCTRDQMKDELTKLLTFVLDLLKDYGLDDFYLELSTKNPQKFVGSDEVWEEATRTLQ 496

Query: 450 GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAF 509
            V +         +         AFYGPK     +DAIGR WQ  TIQ+DFNLP RF   
Sbjct: 497 EVAEASG------LELRPDPEGAAFYGPKISVQARDAIGRTWQMSTIQLDFNLPERFELE 550

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQ 569
           Y  +   +  PVMIHRA+FGSIERF G++ E++ G  P WL+P+Q  +  +  +   Y +
Sbjct: 551 YTAADGSRQRPVMIHRALFGSIERFFGVLTEHYAGAFPAWLAPVQVRLVPVADTFNAYCE 610

Query: 570 EIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           ++A  L++ ++ +E D  ++    KIR  +  K+P  +I G ++A   ++  R  G    
Sbjct: 611 DVAKQLRAENVRVEIDESDDRFGKKIRNAAKDKVPFTLIVGGEDAEHGAVSFRYRGGEQK 670

Query: 630 QKVSLLDAIPILTK 643
             V +  AI  +T+
Sbjct: 671 NGVKISAAIQEITE 684


>gi|227495497|ref|ZP_03925813.1| threonine--tRNA ligase [Actinomyces coleocanis DSM 15436]
 gi|226831044|gb|EEH63427.1| threonine--tRNA ligase [Actinomyces coleocanis DSM 15436]
          Length = 665

 Score =  559 bits (1441), Expect = e-157,   Method: Composition-based stats.
 Identities = 245/668 (36%), Positives = 365/668 (54%), Gaps = 43/668 (6%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           +DI++   DG  K      TG D   S      K+ +A+ ++G   DLS  +  +  I+ 
Sbjct: 2   ADIQVVI-DGEEKQIAAGLTGLDYYAS-----EKEIIAMYVDGVETDLSAEIPADAEIKG 55

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           I       LA++RHSC H+MA+AVQ + P+V + IGP + DGFYYDF   +PF+ ++L +
Sbjct: 56  ININSDAGLAILRHSCTHVMAQAVQQLNPQVDLGIGPPVTDGFYYDFGNVEPFTPEDLKE 115

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK------------- 168
           IEK M+ I+     F+++ ++ E+AR   E   + +K+ ++ +  +              
Sbjct: 116 IEKVMKRIVKEGQSFVRRVVTEEEARA--ELADQPHKLHLIGAKGSDLGEGAAVEVGGGE 173

Query: 169 ----ENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTA 224
               +NV    +  W DLCRGPH+ +T  +   F LMK + AYW G+     L RIYGTA
Sbjct: 174 LTIYDNVRRNGEVAWSDLCRGPHIPNTKLIGNGFALMKTSAAYWLGNQKNAQLQRIYGTA 233

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM 283
           W T++EL  YL+ L E+EKRDHRKL  E+DLF   ++ GSG+  +H KG  I   +  Y 
Sbjct: 234 WPTKEELAAYLHRLSEAEKRDHRKLGTELDLFSFPDEIGSGLACFHPKGGIIRMEMEEYS 293

Query: 284 R-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT--------IKDLRTF 334
           R R ++  Y+ + +P +    L+++SGH   Y+  M+     D+          K  + +
Sbjct: 294 RKRHVQAGYDFVYSPHITKGALFEKSGHLSWYKDGMYPALSIDEERNPETGEITKAGQDY 353

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
            LKPMNCP H  +F    +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDDAH++
Sbjct: 354 YLKPMNCPMHNLIFASRGRSYRELPLRLFEFGTVYRYEKSGVVHGLARGRGFTQDDAHIY 413

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLS-TRPEKRVGSDALWDDAENIMKGVLD 453
           CT+EQM +E   +   ++ + KD+G     ++LS    EK VG DA W++A   +  V +
Sbjct: 414 CTREQMKDELTSLLTFVLDLLKDYGLNDFYLELSTKNEEKFVGDDATWEEATRTLAEVAE 473

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS 513
                    +      G  AFYGPK     KDAIGR WQ  TIQ+DFNLP RF   Y   
Sbjct: 474 ASG------LQLVPDPGGAAFYGPKISVQAKDAIGRTWQMSTIQLDFNLPERFELEYTAP 527

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIAN 573
              +  PVMIHRA+FGSIERF  ++ E++ G  P WL+P+Q     +     +Y +EIA 
Sbjct: 528 DGTRQRPVMIHRALFGSIERFFAVLTEHYAGAFPAWLAPVQVRCIPVAEKFEDYLEEIAK 587

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            L++  + +E D  ++    KIR  S  K+P  +I G  +    ++  R    +   +V 
Sbjct: 588 QLRAEGVRVEIDRSDDRFGKKIRNASKDKVPFTLIAGGDDVDANAVSFRLRDGSQDNQVP 647

Query: 634 LLDAIPIL 641
           + +A+  +
Sbjct: 648 VAEAVERI 655


>gi|289705559|ref|ZP_06501951.1| threonine--tRNA ligase [Micrococcus luteus SK58]
 gi|289557788|gb|EFD51087.1| threonine--tRNA ligase [Micrococcus luteus SK58]
          Length = 672

 Score =  559 bits (1441), Expect = e-157,   Method: Composition-based stats.
 Identities = 246/674 (36%), Positives = 366/674 (54%), Gaps = 46/674 (6%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIE 60
           P +I LT  DG ++      TG D+              + ++G + DL+  +  G S+E
Sbjct: 4   PKNILLTV-DGELREVTHGTTGLDLFRE-----KPTTAVMRVDGLLWDLAREIPAGASVE 57

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            +   +P  L V+RHS AH+MA+AVQ + P  ++ +GP I DGFY+DFD ++PF+ ++L 
Sbjct: 58  SVDITEPEGLEVLRHSTAHVMAQAVQQLRPGAKLGVGPYITDGFYFDFDVDEPFTPEDLK 117

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN---------- 170
           QI   MQ+I+     F ++ +  E AR   E   E YK+E+L    A +           
Sbjct: 118 QISSLMQKIVKSGQTFRRRVVDEETARA--EMADEPYKLELLGKKDAADTAGEGASVEVG 175

Query: 171 ---VTLYRQGE-------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRI 220
              +T+Y   +       W DLCRGPH+ ST  +   F L + A AYW G+     L RI
Sbjct: 176 AGEITVYDNVDRKTGDAVWCDLCRGPHLPSTKLIGNGFALTRSAAAYWLGNEKNKQLQRI 235

Query: 221 YGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTL 279
           YGTAW ++ +L  Y   L E+E+RDHRKL  E+DLF   ++ GSG+  +H +G  I + +
Sbjct: 236 YGTAWASKDDLKAYQERLAEAERRDHRKLGAELDLFSFPDELGSGLPVFHPRGGIIRKEM 295

Query: 280 ISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT--------IKD 330
             Y RR+  +  YE + TP +  QHL++ SGH D Y   MF     D+          + 
Sbjct: 296 EDYSRRRHTEAGYEFVYTPHITKQHLYEVSGHLDWYADGMFPPMHIDEVRDPETGEITRQ 355

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
            + + LKPMNCP H  ++    +SYRELP+RL EFGSVYR E SG +HGL RVRG TQDD
Sbjct: 356 GQNYYLKPMNCPMHNLIYRSRGRSYRELPLRLFEFGSVYRYEKSGVVHGLTRVRGMTQDD 415

Query: 391 AHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMK 449
           AH++CT+EQM  E     N ++ + KD+G     ++LST+  +  VGSD +W++A   + 
Sbjct: 416 AHIYCTREQMKEELTTTLNFVLDLLKDYGLNDFYLELSTKDPEKFVGSDEIWEEATRTLA 475

Query: 450 GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAF 509
            V +         +      G  AFYGPK     +DAIGR WQ  TIQ+DFNLP RF+  
Sbjct: 476 EVAEASG------LQLVPDPGGAAFYGPKISVQARDAIGRTWQMSTIQLDFNLPERFDLE 529

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQ 569
           Y  +   +  PVMIHRA+FGSIERF+G++ E++ G  P WL+P Q +   +  +  +Y  
Sbjct: 530 YQAADGTRQRPVMIHRALFGSIERFLGVLTEHYAGAFPAWLAPEQVVAIPVAEAFNDYLD 589

Query: 570 EIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           ++   L++  +    D  ++    KIR  + +K P ++I G ++    ++  R    T  
Sbjct: 590 DVVAKLRAEGIRARLDDSSDRFPKKIRTAAKEKAPFVLIAGGEDREANAVSFRFRDGTQD 649

Query: 630 QKVSLLDAIPILTK 643
             V + +AI  + K
Sbjct: 650 NGVPVEEAIERIVK 663


>gi|295109520|emb|CBL23473.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Ruminococcus
           obeum A2-162]
          Length = 653

 Score =  559 bits (1441), Expect = e-157,   Method: Composition-based stats.
 Identities = 229/646 (35%), Positives = 349/646 (54%), Gaps = 19/646 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T  DGS K +    +  D+A  IS  LA+ A A  +NG+V DL   +  +  + I+T +
Sbjct: 3   ITLKDGSKKEYFEAKSVIDIAYDISEGLARAACAGEVNGEVVDLRTVLDSDCELNILTAK 62

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D + LAV+RH+ +H++A+AVQ+++PE +VAIGP I+ GFYYDF  E PFS ++L  IEK+
Sbjct: 63  DEKGLAVLRHTASHVLAQAVQNLYPEAKVAIGPSIDTGFYYDFAHE-PFSREDLDAIEKE 121

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M++II + +   +   S E A   F+ K E YKVE++E +P    ++ Y QG+W DLC G
Sbjct: 122 MKKIIKKGAKIERFTKSREDAIAYFKEKNEPYKVELIEDLPEDAEISFYSQGDWTDLCAG 181

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PH+ S   VK F KL+  + AYWRG     ML+RIYGTA+ ++ EL ++L  +EE+++RD
Sbjct: 182 PHLMSVKGVKAF-KLLSSSSAYWRGSEKNAMLTRIYGTAYASKDELKEHLEQMEEAKRRD 240

Query: 246 HRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQH 303
           H KL REM +F      G G+      G  + Q L  ++   + K  Y    TP +    
Sbjct: 241 HNKLGREMKIFTTVDVIGQGLPLIMPNGVIMMQELQRWIEDEETKRGYVRTKTPLMAKSD 300

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           L++ SGHWD Y+  MF +    D   D   FAL+PM CP    V+     SYR+LP+R  
Sbjct: 301 LYKISGHWDHYKDGMFVL---GDEENDKEVFALRPMTCPFQYYVYKAEQHSYRDLPLRYG 357

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           E  +++RNE SG +HGL RVR FT  + H+    +QM  E      L     +  G E+ 
Sbjct: 358 ETSTLFRNEDSGEMHGLTRVRQFTISEGHLIVRPDQMVKEFKDCIALAQYCLQVLGVEED 417

Query: 424 MVKL-----STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           +         T  EK +G   +W++ E  ++ +L  +       I     +GE AFYGPK
Sbjct: 418 VTYHLSKWDPTNREKYIGEPEVWEETEGHIRQMLQELN------IPFTEDVGEAAFYGPK 471

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +   K+  G++    TIQ D  L  +F+ +Y++ + +K  P +IHR   G  ER +  +
Sbjct: 472 VDINAKNVYGKEDTMITIQWDALLAEQFDMYYIDENGDKKRPYIIHRTSMGCYERTLAWL 531

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE + G  P WL P Q  V  I+     YA ++   +K   +    D R+E + YKIRE 
Sbjct: 532 IEKYAGMFPTWLCPEQVRVIPISEKFNAYADKVEAQMKEAGIRCSVDRRSEKMGYKIREA 591

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            ++++P +++ G KE  E  + +R           L D +  + +E
Sbjct: 592 RLERVPYMLVVGAKEEEEGKVSVRSRYLGDEGMKDLGDFMSAIKEE 637


>gi|83764551|dbj|BAE54695.1| unnamed protein product [Aspergillus oryzae]
          Length = 717

 Score =  559 bits (1441), Expect = e-157,   Method: Composition-based stats.
 Identities = 222/674 (32%), Positives = 361/674 (53%), Gaps = 51/674 (7%)

Query: 4   DIKLTFP--DGSIKNF---PVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EG 57
           +I +T    +G+ +         T + + +++ + L+   V   ++ ++ DLS P+  + 
Sbjct: 48  EITVTLQPGNGNKEQVSAKAWETTPAQLLKNVPKELSATIVLAKVDNELWDLSRPLEGDC 107

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK--EQPFS 115
           ++  +  EDP    V  HS AH + EA +  +    ++ GP    GF+YD      +   
Sbjct: 108 TVSYVRFEDPEGREVFWHSSAHCLGEACECEY-GCLLSHGPPTPQGFFYDMAMPDNRVVR 166

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
             +   ++K    +      F +  ++ E  +++F   K  YK+  ++ +   E  T+YR
Sbjct: 167 ETDWPALDKHANRVFKEKQSFDRLEVTKENLKKMFAYSK--YKLHYIDKLVTGEKSTVYR 224

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
            G   DLCRGPH+++TG++K F K+M+ + AY+ GD +   L RI G A+  ++++ ++L
Sbjct: 225 CGTLVDLCRGPHIQNTGKIKTF-KIMQNSSAYFLGDQSNDSLQRIRGVAFPDKKQMQEHL 283

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEI 294
            FLEE+EKR+H K+ +E +LF   E   G  F    G KIF  L + +R + +   Y+E+
Sbjct: 284 KFLEEAEKRNHVKIGKEQELFFFDEVSPGCPFLLPNGTKIFNALQTLLRSEYRKRGYQEV 343

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
            TP + D  +W+ SGHW  Y+ +MF +        + R +ALKPMNCPGH  +F H  +S
Sbjct: 344 QTPNMYDVGIWKTSGHWAHYKDDMFKLDV------EKREWALKPMNCPGHFVLFGHRERS 397

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YRELP+RLA+FG ++RNE SG+L GL RVR F QDD H+FCT++Q+ +E   + + + SI
Sbjct: 398 YRELPLRLADFGVLHRNEASGALSGLTRVRKFQQDDTHIFCTQDQITSEIEGLFDFLQSI 457

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           Y  FGF   + KLSTRPEK +G    W+ AE  +K  +   K       +  +  G+GAF
Sbjct: 458 YGLFGFTFKL-KLSTRPEKYLGELETWNYAEEQLKAAMTKFKGD-----DWTIDEGDGAF 511

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC---------------- 518
           YGPK +  + DA+ R++QC TIQ+D+  P  F   Y+++                     
Sbjct: 512 YGPKIDITIADALKREFQCATIQLDYQAPINFKLEYMSNEKADKSQAAAESAEGENKSSE 571

Query: 519 ------HPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIA 572
                  PV+IHRA+ GS ERF+GI+ E+F G  P W+SP Q ++  +  +  +Y +E+ 
Sbjct: 572 PGPGRARPVVIHRAIIGSFERFLGILTEHFGGKWPFWISPRQILIVPVMPAVNDYVEELQ 631

Query: 573 NLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK- 631
            +L+   L+++ D    T+  KIR   + +   I + G +E   R++ IR      TQK 
Sbjct: 632 TILRGDKLNVDIDISGNTMQKKIRTGQLAQYNFIFVVGAQEKEARTVNIRNRDDPATQKQ 691

Query: 632 ---VSLLDAIPILT 642
              + L +A   L 
Sbjct: 692 GVMIPLEEAREKLR 705


>gi|322368472|ref|ZP_08043041.1| threonyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
 gi|320552488|gb|EFW94133.1| threonyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
          Length = 640

 Score =  559 bits (1441), Expect = e-157,   Method: Composition-based stats.
 Identities = 256/647 (39%), Positives = 377/647 (58%), Gaps = 23/647 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
           SDI +T PDG+  +    AT  DVA  I   L K  VA  ++G++ D + P+  +  + I
Sbjct: 2   SDIVVTLPDGAELDMEEGATVEDVAYEIGPGLGKDTVAGVVDGELVDKATPLSEDCRLVI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +T +    L+V+RHS AH+ A+A++ + PE ++ IGP  ++GFYYD    +  S D+LA+
Sbjct: 62  VTDQSDEYLSVLRHSAAHVFAQALKRLHPEAKLTIGPWTDEGFYYDIAGIELDS-DDLAE 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWF 180
           IE +  +II  D    +   S E+A +++E     YK +IL++  A E+ ++ Y QGE+ 
Sbjct: 121 IEDEGHDIIEEDLDIERVEKSREEAFDMYE--DNEYKQDILDTEAADEDSISFYEQGEFS 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLC+GPHV STG++  F  L     AYWRGD    ML+R+YGTA+ T++ L QYL  +EE
Sbjct: 179 DLCKGPHVSSTGEIGGFTLLETS-AAYWRGDEENDMLTRVYGTAFPTEKGLEQYLERMEE 237

Query: 241 SEKRDHRKLAREMDLFHIAEDG-SGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           +E+RDHRKL +E+DLF I E    G+  +H  G  I + L  Y         Y+E+ TP 
Sbjct: 238 AEERDHRKLGKELDLFSIDETTGPGLPLYHPHGKTILRELSDYAGELNRGAGYDEVETPH 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW++SGH+D+Y  +MF +   D+       + LKPMNCPGH  +F+    SYR+L
Sbjct: 298 LFRTELWKKSGHYDNYVDDMFLLDVNDE------EYGLKPMNCPGHATIFDQHSWSYRDL 351

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R  E G VYR E  G L GL RV  FT DD H+F   +Q+  E  ++ +LI  + + F
Sbjct: 352 PIRYFENGKVYRKEQRGELSGLSRVWSFTIDDGHLFVRPDQIEREIRQVMDLIFEVIETF 411

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
               + V L+TRPEK VGSD LW+ AE  ++ VL++        I+  +  G+GAFYGPK
Sbjct: 412 DL-DVEVALATRPEKSVGSDELWEHAEEQLRSVLESTG------IDYDIEAGDGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++  +DA+GR W   T+Q+DFN+P RF+  YV   +E+  PVMIHRA++GS ERF  ++
Sbjct: 465 IDFGFEDALGRVWDGPTVQLDFNMPERFDLTYVTEENEEERPVMIHRALYGSYERFFMVL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+F G  PLWLSP Q  V  ++   + YA  +AN L      +E + R+ T+  KI++ 
Sbjct: 525 IEHFDGKFPLWLSPEQVRVLPVSDDNLGYAHRVANELDD--FRVEVEDRSWTVGRKIQQA 582

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
              ++P +II G  E    +I +R       + VSL      L  E 
Sbjct: 583 HDDRVPYMIIVGGDEEEAGTISVRDRLEREEKDVSLEAFREHLEAER 629


>gi|319935875|ref|ZP_08010301.1| threonyl-tRNA synthetase [Coprobacillus sp. 29_1]
 gi|319809142|gb|EFW05623.1| threonyl-tRNA synthetase [Coprobacillus sp. 29_1]
          Length = 581

 Score =  559 bits (1440), Expect = e-157,   Method: Composition-based stats.
 Identities = 235/585 (40%), Positives = 368/585 (62%), Gaps = 19/585 (3%)

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
             ++   L ++ HSCAH++A+A+Q ++P  +  +GP++ +GFYYD D  ++    +++  
Sbjct: 7   DFKNDEQLNMLNHSCAHVLAQAIQHLYPNAKFWVGPVVSEGFYYDIDLGDKVIKDEDIPA 66

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK+M++I       +++  S  +A E+F+   + YK++++  +    ++T YRQG++ D
Sbjct: 67  IEKEMKKICKDGKRIIREEHSKAEAMEMFK--DDPYKLDLISGL-EDGHITCYRQGDFVD 123

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV +    K F KL+K +GAYW+GD +  +L RIYG  + T +EL  YL FLEE+
Sbjct: 124 LCRGPHVETVKMCKNF-KLLKHSGAYWKGDKDNKVLQRIYGVCFPTPEELQAYLDFLEEA 182

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVL 300
           +KRDH+KL RE+DLF ++E   G+ F+   G  +   L  +      K+ YE I TP ++
Sbjct: 183 KKRDHKKLGRELDLFMMSEYAPGMPFFLPHGMLLRNELEKFWYDEHTKEGYEFIKTPIMM 242

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            + LW+ SGHW +Y+ NM+       ++ D R FA+KPMNCPG + V+ +GL SY++LP+
Sbjct: 243 SKELWEVSGHWYNYKENMYT------SLVDEREFAIKPMNCPGSLLVYKNGLHSYKDLPI 296

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+ E G V+R+E SG+L+GL RVR FTQDDAH+F T +Q+ +E +++   I  +Y   G 
Sbjct: 297 RMGELGQVHRHEASGALNGLFRVRTFTQDDAHIFMTPDQIESEVVRLIAFIDRVYSMLGL 356

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
              +   +   EK +G   +W+ +E  +               +  +  G+GAFYGPK +
Sbjct: 357 SYDIELSTRPEEKYIGELEIWEKSEAALAAACQAAGK------DYKINPGDGAFYGPKLD 410

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           + +KD++GR WQCGTIQ+D NLP RF+  YV+ + EK  PVM+HR +FGSIERFIGI+IE
Sbjct: 411 FHVKDSLGRVWQCGTIQLDMNLPERFDLTYVDQNGEKVRPVMVHRVIFGSIERFIGILIE 470

Query: 541 NFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           +F G  PLWL+P Q  V  + +   ++Y+QEI  LL++  + +E D R E + Y+IRE  
Sbjct: 471 HFAGAFPLWLAPAQVKVIPVKNEYHLDYSQEIFKLLEAKGIRVEIDDREEKLGYRIREAQ 530

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +KKIP  ++ GDKE  ER++  R++G      VSL + I ++ K+
Sbjct: 531 MKKIPYQLVLGDKERDERTVTYRQYGEQKQTTVSLDEFICMILKQ 575


>gi|227875460|ref|ZP_03993601.1| threonyl-tRNA synthetase [Mobiluncus mulieris ATCC 35243]
 gi|227844014|gb|EEJ54182.1| threonyl-tRNA synthetase [Mobiluncus mulieris ATCC 35243]
          Length = 692

 Score =  559 bits (1440), Expect = e-157,   Method: Composition-based stats.
 Identities = 252/674 (37%), Positives = 377/674 (55%), Gaps = 48/674 (7%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEII 62
            I +   DG         TG D+         K+ +A  ING+  DL   + EG ++E I
Sbjct: 25  SISVVI-DGKATTIAEDQTGQDIYRD-----RKEVIACFINGEPRDLYRNLHEGDALEAI 78

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +    L ++RHS  H+MA+AV+ + P+V+  IGP IE+GFYYDF   QPF+ ++L +I
Sbjct: 79  TIDSEMGLNILRHSATHVMAQAVKQVRPDVKYGIGPFIENGFYYDFGVAQPFTPEDLKEI 138

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-------------------- 162
           EK M  I   D  F+++ ++ ++AR+  E   + YK+E++                    
Sbjct: 139 EKYMARICKEDQRFVRRAVTEDEARQ--ELADQPYKLELIGLKGGSDEDNDQAAAGASVE 196

Query: 163 ---ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSR 219
                +   +NV    +  W DLCRGPH+ ST  +   FKL+KV+ AYWRGD     L R
Sbjct: 197 VGGAELTIYDNVRKNGETAWKDLCRGPHIPSTRLLSGAFKLLKVSAAYWRGDQKNDSLQR 256

Query: 220 IYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQT 278
           IYGTAW T++EL  Y+  LEE+EKRDHR+L  E+DLF   E+ GSG+  +H KG  +   
Sbjct: 257 IYGTAWPTKEELKAYVTRLEEAEKRDHRRLGTELDLFSFPEEIGSGLPVFHPKGALVRME 316

Query: 279 LISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT-------IKD 330
           + +Y R R +++ Y  ++TP V    L++ SGH   Y+  MF     D+         K+
Sbjct: 317 MENYSRQRHLEEGYSFVSTPHVTKGQLFETSGHLSWYKEGMFPAMHLDEERDAQGNVTKE 376

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
              + LKPMNCP H  +F    +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDD
Sbjct: 377 GADYYLKPMNCPMHNLIFKSRTRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDD 436

Query: 391 AHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMK 449
           +H++CT++QM +E  K+   ++ + KD+G +   ++LST+  +  VGSD +W++A   ++
Sbjct: 437 SHIYCTRDQMKDELTKLLTFVLDLLKDYGLDDFYLELSTKNPQKFVGSDEVWEEATRTLQ 496

Query: 450 GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAF 509
            V +         +         AFYGPK     +DAIGR WQ  TIQ+DFNLP RF   
Sbjct: 497 EVAEASG------LELRPDPEGAAFYGPKISVQARDAIGRTWQMSTIQLDFNLPERFELE 550

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQ 569
           Y  +   +  PVMIHRA+FGSIERF G++ E++ G  P WL+P+Q  +  +  +   Y +
Sbjct: 551 YTAADGSRQRPVMIHRALFGSIERFFGVLTEHYAGAFPAWLAPVQVRLVPVADTFNAYCE 610

Query: 570 EIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           ++A  L++ ++ +E D  ++    KIR  +  KIP  +I G ++A   ++  R  G    
Sbjct: 611 DVAKQLRAENVRVEIDESDDRFGKKIRNAAKDKIPFTLIVGGEDAEHGAVSFRYRGGEQK 670

Query: 630 QKVSLLDAIPILTK 643
             V +  AI  +T+
Sbjct: 671 NGVKISAAIQEITE 684


>gi|291456785|ref|ZP_06596175.1| threonine--tRNA ligase [Bifidobacterium breve DSM 20213]
 gi|291382062|gb|EFE89580.1| threonine--tRNA ligase [Bifidobacterium breve DSM 20213]
          Length = 677

 Score =  559 bits (1440), Expect = e-157,   Method: Composition-based stats.
 Identities = 241/667 (36%), Positives = 366/667 (54%), Gaps = 43/667 (6%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           + I +T  +G  K      TG ++         K  VAV +NG+  DL  P+ +G ++E 
Sbjct: 4   ATISITV-NGEAKEVEATTTGVELFAE-----DKNIVAVKLNGENRDLYTPLADGDTVEP 57

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           IT +    LA++RHS  H+MA+AVQ ++P  ++ +GP+I+DGFYYDF  ++PF+ ++L  
Sbjct: 58  ITLDSEDGLAIMRHSATHVMAQAVQEVYPNAKLGVGPVIKDGFYYDFQVDKPFTPEDLKD 117

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPA-----------KEN 170
           IEK+MQ II     F ++ ++ E+A +  E   + +K+E++E   A           ++ 
Sbjct: 118 IEKRMQRIIKSSQSFRRRSVTEEEALK--EEADQPFKIELIEDKEAHLDPAAATEISEKE 175

Query: 171 VTLYRQGE------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTA 224
           ++ Y   +      W DLCRGPH+ +T  +K F K+ + A AYWRG    P + RIYGTA
Sbjct: 176 LSFYDNVDRDGNVVWKDLCRGPHLPNTRYIKAF-KIERSAAAYWRGSEKNPTMQRIYGTA 234

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM 283
           W  +++L  Y   LEE+ KRDHRKL  EMDLF   ++ G G+  +H KG  +   +  Y 
Sbjct: 235 WANKEDLKAYQTRLEEAAKRDHRKLGAEMDLFSFPDEIGPGLAVFHPKGAAVINAMEDYS 294

Query: 284 RR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT-------IKDLRTFA 335
           R    K  Y  + TP +    L++ SGH   Y+  M+     D+         K    + 
Sbjct: 295 REMHRKHHYSFVQTPHITKGGLYETSGHLHWYKDGMYPPMHLDEEYDEDGNVTKPGFDYY 354

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC 395
           LKPMNCP H  +F    +SYRELP+RL EFG+VYR E SG +HGL RVRG TQDD+H++C
Sbjct: 355 LKPMNCPMHNLIFKSRQRSYRELPLRLFEFGTVYRYEKSGEVHGLTRVRGLTQDDSHIYC 414

Query: 396 TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDT 454
           T+EQM +E   +   ++++ KDFG     ++LST+     VGSD +W++A   ++ V + 
Sbjct: 415 TREQMKDELTSLLTFVLNLLKDFGLSDFYLELSTKDPDKYVGSDEIWEEATRTLREVAEA 474

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH 514
                   ++     G  AFYGPK     +DAIGR WQ  TIQ+DFNLP RF   Y+   
Sbjct: 475 ------SHLDLVADPGGAAFYGPKISVQARDAIGRTWQVSTIQLDFNLPERFQLEYIAKD 528

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANL 574
                PVMIHRA+FGSIERF  +++E++ G  P WL+P+Q +   +      +       
Sbjct: 529 GTHQRPVMIHRALFGSIERFFAVLLEHYAGAFPAWLAPVQVLGVPVADEFAPHLAGFVKS 588

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           L+   +  E D+ ++    KIR  S  K+P I+I G+++ +  ++  R    +    V +
Sbjct: 589 LEDEMVRCEIDYSDDRFGKKIRNASKSKVPFILIVGEEDMNNNAVSFRFRDGSQLNGVPV 648

Query: 635 LDAIPIL 641
             A   +
Sbjct: 649 DKAREQI 655


>gi|302335586|ref|YP_003800793.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Olsenella uli
           DSM 7084]
 gi|301319426|gb|ADK67913.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Olsenella uli
           DSM 7084]
          Length = 588

 Score =  559 bits (1440), Expect = e-157,   Method: Composition-based stats.
 Identities = 248/581 (42%), Positives = 351/581 (60%), Gaps = 19/581 (3%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ--PFSSDELAQIEKK 125
             L VIRHS AHIMA+A++ ++PE   A GP  ++GFYYD D  +    S D+L  IE +
Sbjct: 17  EELHVIRHSAAHIMAQAIKRLYPEADFAFGPATDNGFYYDIDLPEGTKISDDDLPAIEAE 76

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M++I   +  F    L  E A    E + E YKVE +  +P    +T YRQGE+ D+C G
Sbjct: 77  MRKITKENLRFETYELPREDAIRHMEERGEKYKVEHIGDLPDDARITFYRQGEYVDMCVG 136

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PH+  T  +K F KL  V+GAYWRGDS   ML+R+ G A+ +++EL ++   L E+EKRD
Sbjct: 137 PHLTYTKALKAF-KLTGVSGAYWRGDSANKMLTRVNGVAFRSREELLEHERLLAEAEKRD 195

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHL 304
           HRK+ +EM LF ++E G G  FW   G ++   L+ Y +       YE++ TP +L + L
Sbjct: 196 HRKIGKEMGLFMMSEAGPGFPFWLPNGMRVRNALMDYWQEMQDRFGYEQVQTPIILSRTL 255

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W+ SGHWD Y+ NM+  +       D   FA+KPMNCPG   V+    +SYR+LP++LAE
Sbjct: 256 WETSGHWDHYKDNMYTTQI------DDEDFAIKPMNCPGACLVYKSKPRSYRDLPLKLAE 309

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
            G  +R+E  G+LHGL RVR FTQDDAH+F   +Q+  +     +LI + Y  FGF    
Sbjct: 310 AGLDHRHELKGALHGLFRVREFTQDDAHLFIRPDQITEQVTDTAHLITTYYAQFGFPYH- 368

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           V+LSTRPE  +GSD  W+ AE  ++  LD++       ++  V  G+GAFYGPK ++ L+
Sbjct: 369 VELSTRPEDSMGSDEDWERAEQGLRDALDSMG------VDYIVNEGDGAFYGPKIDFHLQ 422

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D +GR WQCGTIQ+DF LP  F   Y      K  P+MIHRA FGS ERFIG++IE ++G
Sbjct: 423 DCLGRTWQCGTIQLDFQLPHNFQLEYTAPDGSKQQPIMIHRAGFGSFERFIGMLIEQYEG 482

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK-KI 603
             P WLSP Q  V  ++    +YA E+A  L++  + ++ D R+E I YKIRE     ++
Sbjct: 483 KFPTWLSPCQVKVLPVSEKTRDYALEVARTLRAAGVRVKVDVRDEKIGYKIREARSADRV 542

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P ++I G+KEA   +I +R   + T Q  +L D +  +T E
Sbjct: 543 PYMLILGEKEAEANNISVRDRSNETHQA-TLEDFVTEITAE 582


>gi|309811262|ref|ZP_07705053.1| threonine--tRNA ligase [Dermacoccus sp. Ellin185]
 gi|308434802|gb|EFP58643.1| threonine--tRNA ligase [Dermacoccus sp. Ellin185]
          Length = 665

 Score =  559 bits (1439), Expect = e-157,   Method: Composition-based stats.
 Identities = 251/671 (37%), Positives = 362/671 (53%), Gaps = 47/671 (7%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SI 59
           M  +I LT  +G  +      TG+D+         K  + + I+G++ DL   + +G S+
Sbjct: 1   MSENITLTV-NGEPREVEQGTTGTDLF-----GGDKAVLVMRIDGELRDLFREIPDGASV 54

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           E +T +DP  LAV+RHS AH++A+AVQ I P  ++ IGP + DGFYYDFD  + F+ D+L
Sbjct: 55  EPVTAQDPEGLAVLRHSAAHVLAQAVQQINPSAKLGIGPPVTDGFYYDFDVAEAFTPDDL 114

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL----------------- 162
            ++EK MQ I+     F ++ ++   A  L E   E YK E++                 
Sbjct: 115 KKLEKAMQRIVNEGQTFNRRVIT--DAEGLEELAHEPYKCELIGLKGNAANAAEGAEAEV 172

Query: 163 --ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRI 220
               +   +NV       W DLCRGPHV ST  +   FKLM+ A AYWRG    P L RI
Sbjct: 173 GGGELTIYDNVRRDGTVAWGDLCRGPHVPSTKVLGNAFKLMRSAAAYWRGSEKNPQLQRI 232

Query: 221 YGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTL 279
           YGTAW T+ EL  YL  L E+EKRDHRKL  E+DLF   E+ G G+  +H KG  I + +
Sbjct: 233 YGTAWPTKDELKAYLERLAEAEKRDHRKLGAELDLFSFPENIGPGLPVFHPKGGIIKREM 292

Query: 280 ISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKP 338
             Y+RR  I++ +  + TP +  + L+  SGH   Y   MF          D + + LK 
Sbjct: 293 EDYVRRRHIEEGFSYVGTPHIAKEDLFYTSGHLPYYADGMFPPLDV-----DGQNYRLKA 347

Query: 339 MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE 398
           MNCP H  +F    +SYRELP+R  EFG+VYR+E SG L GL RVR  TQDD+H + T E
Sbjct: 348 MNCPMHNEIFRSRGRSYRELPLRFFEFGTVYRDEKSGVLSGLTRVRMITQDDSHSYVTPE 407

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP------EKRVGSDALWDDAENIMKGVL 452
           Q   E   + + I+ + +DFG     ++LSTR       +K +G+D  WD A  ++  V 
Sbjct: 408 QAPGEIKHLLDFILGLLRDFGMNDFYLELSTRDVDGDKKDKFIGTDEQWDIATKVLSDV- 466

Query: 453 DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
                + +  +      G  AFYGPK     +DAIGR WQ  TIQ DFN P+RF   Y  
Sbjct: 467 -----ALESGLELVPDPGGAAFYGPKISVQARDAIGRTWQMSTIQYDFNQPARFGLEYQA 521

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIA 572
           +   +  PVM+H A FGSIERF+G+++E++ G  P WL+P+Q +   +     +Y Q++A
Sbjct: 522 ADGSRQQPVMVHSAKFGSIERFLGVLVEHYAGAFPAWLAPVQVLAVPVAEEYYDYLQDVA 581

Query: 573 NLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
             L+   + +E D  ++    KIR  S  K P I+I G+++    ++  R    +    V
Sbjct: 582 MKLREAGVRVEVDMSDDRFPKKIRNASKSKAPFILIAGEEDRDNGAVSFRFRDGSQKNGV 641

Query: 633 SLLDAIPILTK 643
            + DAI  +T+
Sbjct: 642 PVADAIAEITR 652


>gi|110668486|ref|YP_658297.1| threonyl-tRNA synthetase [Haloquadratum walsbyi DSM 16790]
 gi|121687233|sp|Q18H54|SYT_HALWD RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|109626233|emb|CAJ52691.1| threonine--tRNA ligase [Haloquadratum walsbyi DSM 16790]
          Length = 642

 Score =  559 bits (1439), Expect = e-157,   Method: Composition-based stats.
 Identities = 252/655 (38%), Positives = 371/655 (56%), Gaps = 27/655 (4%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
           +DI +T PDGS  + P  AT  DVA  I   L +  +A  ++G++ D +  V  +  + I
Sbjct: 2   NDITVTLPDGSELSVPADATVEDVAYEIGPGLGRDTIAGVVDGELVDATTSVYNDARVVI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +T +      V+RHS AH+ A+A+Q  +P+ ++ IGP  +DGFYYD         ++L  
Sbjct: 62  VTEQSDEYQRVLRHSAAHVFAQALQREYPDAKLTIGPPTDDGFYYDIASVD-LDENDLET 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWF 180
           IE +M+ II  D P  +QY S E+A    + +   YK +ILE+  A E+ V+ Y Q ++ 
Sbjct: 121 IETEMEAIIDADIPITQQYQSREEA--FSKYENNPYKCDILETEAADEDPVSFYIQDDFE 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLC+GPHV STG++     L  ++ AYWRGD +   L+R+YG A+ ++ EL  +L   ++
Sbjct: 179 DLCQGPHVDSTGEIGAITLL-NISSAYWRGDEDNDTLTRVYGAAFESESELESFLERRKK 237

Query: 241 SEKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           +++RDHRK+ +E+DLF I +  G G+  +H  G KI   L S+ R   ++  YE + TP 
Sbjct: 238 AKERDHRKIGQELDLFSIPDITGPGLPLYHPDGKKILNELSSFARSLNLEAGYEPVETPH 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW+QSGH+++Y  +MF +  +D        + LKPMNCPGH  +F+    SYR+L
Sbjct: 298 LFRTELWKQSGHYENYVDDMFLLDVSD------EEYGLKPMNCPGHATIFDQHSWSYRDL 351

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           PVR  E G VYR E  G L GL RV  FT DD H+FC  EQ+  E   + + I S+   F
Sbjct: 352 PVRYFEDGKVYRKEQRGELSGLSRVWSFTIDDGHLFCQPEQIEQEVTHVMDAIYSVLDTF 411

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           G E  +  L+TRPEK VG D +W++AE  ++ VL++        I+  +  G+GAFYGPK
Sbjct: 412 GLEAHVA-LATRPEKSVGGDEIWENAETQLRSVLES------QNIDYDLEPGDGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++  +DA+GR W   T+Q+DFN+P RF   Y    +    PVMIHRA++GS ERF  ++
Sbjct: 465 IDFAFEDALGRQWDGPTVQLDFNMPDRFELTYTGEDNTDHQPVMIHRALYGSYERFFMVL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+F G  PLWL+P Q  +  I+   + YA  I N L      +  + R  T+  KIR  
Sbjct: 525 IEHFNGKFPLWLAPDQVRILPISDDQLGYAHRIKNELSD--FRVSIEDRAWTLGRKIRAA 582

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE----SLPPD 649
             +++P +II GD E S  +I +R       Q V L      L  E     L PD
Sbjct: 583 QEERVPYMIIIGDDEVSTETISVRDRKEREKQDVDLSTFHSHLKSEYENKRLEPD 637


>gi|167389590|ref|XP_001739012.1| threonyl-tRNA synthetase, cytoplasmic [Entamoeba dispar SAW760]
 gi|165897485|gb|EDR24628.1| threonyl-tRNA synthetase, cytoplasmic, putative [Entamoeba dispar
           SAW760]
          Length = 676

 Score =  558 bits (1438), Expect = e-157,   Method: Composition-based stats.
 Identities = 208/647 (32%), Positives = 345/647 (53%), Gaps = 24/647 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESI--SRSLAKK--AVAVAINGKVCDLSDPVREGS-I 59
           I + + D + +      +  +  + +     + K+       +NGK+ DL+ P  E S +
Sbjct: 40  ITIKYKDMTFQGKSFVTSPQEFIKDLVEKGEITKENPVFVAKVNGKLWDLTRPFEEDSTV 99

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           E +  ++  +  V  HS AH++ EA+++ + +  +  GP     F+YD       S+ + 
Sbjct: 100 EYLGFDNQEAHDVFWHSSAHLLGEAMETQY-KCYLHTGPATAIDFFYDCKMNGAISATDF 158

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +++  ++  +     F +  ++ E+A ++       YKV+I+E +P    +T Y+ G +
Sbjct: 159 KKLQSLIEGYVREHQVFTRIEITKEEALKM--FAYNPYKVKIIEKLPEGSTITAYKNGSF 216

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPH+ +   +K   K++     +  G +   +L R++  ++ T+  L +Y+   E
Sbjct: 217 VDLCRGPHLANAASIK-AIKILSSGSVHLDGTATGDLLQRVHAVSFPTKDLLKEYIKRAE 275

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E++KRDHR + R+ DLF       G  FW   G +I+  L+  +R + +   Y+E+ TP 
Sbjct: 276 EADKRDHRLIGRQQDLFFFHVLSPGSCFWLPHGTRIYNKLVQLIRSEYRVLGYQEVITPN 335

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW+ SGHW  Y+ +MF+ +C      + +TFALKPMNCPGH  +F    +SYREL
Sbjct: 336 IFLSTLWETSGHWQHYKDDMFSFEC------EKQTFALKPMNCPGHCVMFASKKRSYREL 389

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R AEFG ++RNE +G+LHGL RVR F QDD+H+FCT +Q+ +E   + NL+  IYK F
Sbjct: 390 PLRYAEFGVLHRNELTGALHGLTRVRRFVQDDSHIFCTMDQIESEVTGVLNLMKKIYKIF 449

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+  +   +   +K +G    W+ AE ++  VL+         +   +  G+GAFYGPK
Sbjct: 450 GFKTEIALSTRNEKKFMGEIETWNKAEAMLTQVLND------SHLPFVINPGDGAFYGPK 503

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK--CHPVMIHRAVFGSIERFIG 536
            +  ++DA+GR  Q  T+Q+DF LP RF   Y++    +    PVM+HRAV GSIERF  
Sbjct: 504 IDIRIEDALGRKHQVATVQLDFQLPLRFKLDYMSEDPNQPLKTPVMVHRAVLGSIERFTA 563

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           I+ E+  G  P WLSP Q +V T++    EY  +I   L       + D  +  +  KIR
Sbjct: 564 ILTEHLAGKWPFWLSPRQVMVCTVSEKYNEYGAKITKELNDAGFYADLDDSDNKLPKKIR 623

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              + +   I++ G++E    S+ +R   S    KV   + I  L +
Sbjct: 624 NAQVAQYNFILVIGEEELVSNSVNVRTRKSKVEGKVEFSEFIKHLKQ 670


>gi|32490830|ref|NP_871084.1| hypothetical protein WGLp081 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|31340448|sp|Q8D3C0|SYT_WIGBR RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|25166036|dbj|BAC24227.1| thrS [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 636

 Score =  558 bits (1438), Expect = e-157,   Method: Composition-based stats.
 Identities = 263/631 (41%), Positives = 406/631 (64%), Gaps = 16/631 (2%)

Query: 17  FPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRH 75
           F    +  ++ +   ++L++  +A  INGK+ D+S+ +  +GS+E++ PE+   + +IR 
Sbjct: 13  FNYPISIIEIIKKFDKNLSENCIAAKINGKLLDVSEIINYDGSLELVKPENKIGIRIIRC 72

Query: 76  SCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSP 135
           SC+H++  A++ +WP  ++A   I E+GFYYD D     S ++L  IEKKM +++  +  
Sbjct: 73  SCSHLLGYAIKQLWPTSKMATNNITENGFYYDIDLNHKLSKNDLKLIEKKMHQLLKINFK 132

Query: 136 FLKQYLSHEKARELFESKKEAYKVEILES-IPAKENVTLYRQGEWFDLCRGPHVRSTGQV 194
             K  ++  KA E+F++  E YK++ILE  I    ++ +Y Q ++ DLC  PHV +    
Sbjct: 133 INKINVTWGKAYEMFKNLNEIYKIKILEDNISKNSSLYIYHQEQYVDLCTLPHVPNIKFC 192

Query: 195 KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMD 254
             FFK+ K++GAYW+G+    ML RIY T+W++  +L  ++  ++E E RDHRK+ +++D
Sbjct: 193 -MFFKIQKISGAYWKGNKKNKMLQRIYVTSWDSNSKLKNFIKNIKELEHRDHRKIGKKLD 251

Query: 255 LFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDS 313
           LFHI E+  G++FWH  GW IF+ L  ++R+K+K   Y+E+ TP ++D  LW+ SGH D+
Sbjct: 252 LFHIYENSPGMVFWHHNGWIIFRILEKFIRKKLKKFYYQEVKTPCIIDHDLWRLSGHLDN 311

Query: 314 YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP 373
           Y+  MF       T  + + + +KPMNCP HV +F   ++SY+ELP R++EFGS +RNEP
Sbjct: 312 YKNYMF------HTNSENKQYCIKPMNCPAHVLIFKKKIRSYKELPFRISEFGSCHRNEP 365

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
           SGSLHGLMR+R FTQDDAH+FC  +Q+ +E      +I  +Y  FGF+KI+VKLSTRPE 
Sbjct: 366 SGSLHGLMRIRNFTQDDAHIFCMHDQILSEVSSCIKMIYEVYSCFGFKKILVKLSTRPEN 425

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
           R+GSD +WD AE  ++  L       +++I   + L EGAFYGPK E+ L D++ R WQC
Sbjct: 426 RIGSDEIWDFAEKQLELSLK------KNKILFKIDLNEGAFYGPKIEFTLLDSLNRKWQC 479

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI 553
           GTIQ+D  L ++  A+Y+N+ +EK +PV+IHRA+ GS+ERFIGI+ E F G  PLW+SPI
Sbjct: 480 GTIQLDLCLANKLQAYYINNKNEKTNPVIIHRAILGSMERFIGIITEEFSGKYPLWISPI 539

Query: 554 QAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
           Q  V  ++   ++Y ++I        + I +D RNE I++KIRE++++ IP IIICG KE
Sbjct: 540 QVGVINVSVDQIDYVKKITKFFLQKKIRIISDLRNEKISFKIREYTLRFIPYIIICGKKE 599

Query: 614 ASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
               SI +R       +  SL     ++ +E
Sbjct: 600 MESNSISVRNKYGKQLKYSSLEKFYNVIYEE 630


>gi|302816171|ref|XP_002989765.1| hypothetical protein SELMODRAFT_130418 [Selaginella moellendorffii]
 gi|300142542|gb|EFJ09242.1| hypothetical protein SELMODRAFT_130418 [Selaginella moellendorffii]
          Length = 647

 Score =  558 bits (1438), Expect = e-157,   Method: Composition-based stats.
 Identities = 218/628 (34%), Positives = 344/628 (54%), Gaps = 29/628 (4%)

Query: 2   PSDIKLTFPDGSIKNFPVH---ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EG 57
           P D+ +   DG +  +P      T  D+A  IS+  A   V   +NG + D+  P+  + 
Sbjct: 32  PIDVTVH-KDGEV-VYPGRRLLTTPLDIARLISKKKAADYVIAQVNGTLWDMGRPLEEDC 89

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII--EDGFYYDFDKE--QP 113
           ++ +   +D +      HS AHI+ E+++  +   ++ IGP     +GFYYD   E  + 
Sbjct: 90  TLVLYAFKDEQGRDTFWHSSAHILGESLEQAY-GCKLCIGPCTTRGEGFYYDAFYEDGRT 148

Query: 114 FSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTL 173
            + +    ++ ++ + +    PF +  ++ ++A E+       +KVEI+  +P    +T+
Sbjct: 149 LNEENFPAVQSQVTKAVQESQPFERIQVTRQQALEI--FSDNQFKVEIINDLPEDAVITV 206

Query: 174 YRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQ 233
           YR G   DLCRGPH+ +T  VK F   +K +  YW+G   R  L R+YG ++   Q L  
Sbjct: 207 YRCGPLVDLCRGPHIPNTSYVKAFS-CLKASACYWKGKQERESLQRVYGISYPDNQSLKA 265

Query: 234 YLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYE 292
           Y+   EE++KRDHR L +   LF   E   G  F+  KG  ++  L+ ++R + +   ++
Sbjct: 266 YMTKYEEAKKRDHRLLGKNQQLFFFHELSPGSAFFLPKGTIVYNKLLQFIRSEYRKRGFD 325

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+ TP + +  LW+QSGH   Y+ NMF  +       + + F LKPMNCPGH  +F H +
Sbjct: 326 EVVTPNIYNMKLWEQSGHAAHYKENMFVFEI------EKQEFGLKPMNCPGHCLLFQHRV 379

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
           +SYRELP+R+A+FG ++RNE SG+L GL RVR F+QDDAH+FC + Q+++E     + + 
Sbjct: 380 RSYRELPLRIADFGVLHRNELSGALTGLTRVRRFSQDDAHIFCMESQVYDEVKGCLDFLD 439

Query: 413 SIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
            +Y  FGF   + KLSTRPE  +G  +LWD AE  +   L+      Q      +  G+G
Sbjct: 440 YVYTIFGFTYDL-KLSTRPENFLGESSLWDRAEGALADALNAHAKPWQ------MNEGDG 492

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK-CHPVMIHRAVFGSI 531
           AFYGPK +  + DA+ R +QC TIQ+DF  P RF   Y      K   PV+IHRA+ GSI
Sbjct: 493 AFYGPKIDIQVSDALNRKFQCATIQLDFQSPIRFKLSYSAEDEAKIERPVIIHRAILGSI 552

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           ER   I++E+  G  P WLSP QAIV TI+    +YA+E+   L +    ++ D  +  +
Sbjct: 553 ERMFAILLEDNAGKWPFWLSPRQAIVLTISEKFKDYAEEVRAKLHAAGFEVDVDVSDRKV 612

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSI 619
           + K+RE  +     +++ G  E  +  +
Sbjct: 613 DKKVREAQMAHYNYLLVVGAMEQEKGEV 640


>gi|224475774|ref|YP_002633380.1| threonyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus
           TM300]
 gi|222420381|emb|CAL27195.1| threonyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus
           TM300]
          Length = 635

 Score =  558 bits (1438), Expect = e-157,   Method: Composition-based stats.
 Identities = 228/647 (35%), Positives = 373/647 (57%), Gaps = 23/647 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           M + + +T PD          T   VA+ I  S AKKA   +I+G++ DL+  +  +  +
Sbjct: 1   MGNQVIVTLPDQRKLEVEQSTTLYQVAQQIGSSFAKKAAVASIDGELHDLNHQIEKDCQV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           E  T ED   LA IR++ ++++ EA       V+VA   + ++ FY DF  E    + +L
Sbjct: 61  EFFTYEDEEGLAAIRYTLSYLVGEAAVKY--GVEVADFGVNKEQFYCDFKAENTLKAADL 118

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            ++ K + + I+ + P      S   A +LF+     +    +E    +E V +   G++
Sbjct: 119 KEVTKTINKAISANHPIEVHEYSKLDALDLFK--DNPFMQHHIEQ--GEEPVKVAVHGDY 174

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
             +   P V +  +VK + KL  ++   W  D N   L RI G A+   + L ++  F+E
Sbjct: 175 KAVIHQPLVTNLSKVKNY-KLQSISATNWLRDVNNESLQRIAGFAFADAKALEEHQAFIE 233

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           + E+ +HR+L +E+D+F  +E   G+ F+   G  I   L + +R+ + + DYEE+ TP 
Sbjct: 234 KYEQVNHRRLGKELDIFSFSEYAPGMPFYAHNGQVIRLELQNMLRQLQFEADYEEVYTPF 293

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++D+ LW+ SGHWD Y+ NM+  +       D +T+ALKPMNCPGH+ ++ + L SYR+L
Sbjct: 294 IMDETLWKNSGHWDHYQDNMYFTEV------DEQTYALKPMNCPGHMLIYKNHLHSYRDL 347

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG V+R+E SGSL+GL RVR F QDDAH+F  ++Q+ +E L +  LI  +Y  F
Sbjct: 348 PIRMAEFGQVHRHELSGSLNGLFRVRTFNQDDAHIFVRRDQIESEILDVLGLIHKVYSVF 407

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+  + +LSTRP+  +G   LWD AE  ++ +L+      Q      V   +GAFYGPK
Sbjct: 408 GFDYSI-ELSTRPDDFMGEIELWDFAEQSLENMLN------QHGFKYTVNEKDGAFYGPK 460

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +  +KDA+GR  QCGT+Q+DF +P +F+  ++N   EK  PV+IHRA++GS +RFIGI+
Sbjct: 461 IDIHIKDALGRSHQCGTVQLDFQMPEKFDLTFINQAGEKERPVVIHRAIYGSSDRFIGIL 520

Query: 539 IENFKGNLPLWLSPIQA-IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +E+F GNLPLWL+P+Q  ++       ++  +++   LK     +E D  +E + YKIR+
Sbjct: 521 LEHFGGNLPLWLAPVQMEVILVNADLHLDAVKDLKRRLKKEGFRVELDLSDEKMGYKIRQ 580

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
             +KK+P  ++ GD E    ++ +R+ G +    +++ D +  L +E
Sbjct: 581 AHLKKVPYTLVVGDNEVENGTVAVRKRGESEEHSINVEDFVKQLKEE 627


>gi|312139482|ref|YP_004006818.1| threonine-tRNA ligase thrs [Rhodococcus equi 103S]
 gi|311888821|emb|CBH48133.1| threonine-tRNA ligase ThrS [Rhodococcus equi 103S]
          Length = 683

 Score =  558 bits (1438), Expect = e-157,   Method: Composition-based stats.
 Identities = 243/658 (36%), Positives = 371/658 (56%), Gaps = 39/658 (5%)

Query: 16  NFPVHATGSDVAESIS-RSLAKKAVAVA--INGKVCDLS-DPVREGSIEIITPEDPRSLA 71
             P   T                A+ V    +G + DLS  P  +  +E +  +     +
Sbjct: 14  QVPAGTTAGTAVRDAGLPGKGPDAIVVVRDADGNLKDLSWTPDVDVEVEAVAADTEDGRS 73

Query: 72  VIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIA 131
           VIRHS AH++A+AVQ  +PE ++ IGP I+DGFYYDF  E+PF+ ++LA++EK+M++I+ 
Sbjct: 74  VIRHSAAHVLAQAVQQEFPEAKLGIGPPIKDGFYYDFQVERPFTPEDLAKLEKRMKKIVK 133

Query: 132 RDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE------------- 178
               F ++ +  +      E   E +K+E+++     ++  +   G              
Sbjct: 134 DAQRFSRRVV-EDLEDARTELANEPFKLELIDDKSGIDDPEVMEVGGGELTIYDNLNPRT 192

Query: 179 ----WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
               W DLCRGPH+ +T  +  F K+ + + AYWRGD +R  L RIYGTAW + + L Q+
Sbjct: 193 GEVIWKDLCRGPHIPTTKYIPAF-KITRSSAAYWRGDQSREDLQRIYGTAWESTEALDQH 251

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYE 292
           L  L E+E+RDHRKL  E+DLF   ++ GSG+  +H KG  I Q + +Y R R +++ YE
Sbjct: 252 LELLAEAERRDHRKLGAELDLFSFPDELGSGLPVFHPKGGIIRQEMENYSRKRHVEEGYE 311

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD-------LRTFALKPMNCPGHV 345
            + +P +   HL++ SGH D Y+  MF     D+ + +        + + LKPMNCP H 
Sbjct: 312 FVYSPHITKGHLYEVSGHLDWYKDGMFPAMHIDEELNEDGTVRKPGQDYYLKPMNCPMHN 371

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            VF    +SYRELP+RL EFGSVYR E SG +HGL RVRG TQDDAH++CTKEQM +E  
Sbjct: 372 LVFGSRGRSYRELPLRLFEFGSVYRYEKSGVVHGLTRVRGMTQDDAHIYCTKEQMRDELT 431

Query: 406 KIHNLIISIYKDFGFEKIMVKLS-TRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
                ++ + KD+G +   ++LS   P+K VG DALW++A   ++ V +         +N
Sbjct: 432 TTLKFVLGLLKDYGLDDFYLELSTKNPDKFVGDDALWEEATETLREVGEASG------LN 485

Query: 465 TGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIH 524
                G  AFYGPK    ++DA+GR WQ  TIQ+DFNLP RF+  Y  S   K  PVMIH
Sbjct: 486 LVPDPGGAAFYGPKISVQVQDALGRSWQMSTIQLDFNLPERFDLEYTGSDGTKQRPVMIH 545

Query: 525 RAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIET 584
           RA+FGSIERF G++ E++ G  P WL+P+Q +   +  +  ++  ++   LK+  +  E 
Sbjct: 546 RALFGSIERFFGVLTEHYAGAFPAWLAPVQVVGIPVAEAFEDHLFDVVKQLKAAGVRAEV 605

Query: 585 DFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           D  ++ +  KIR H+ +K+P +++ G+++    ++  R    T    V + DA+  + 
Sbjct: 606 DVSDDRMQKKIRNHTTQKVPFMLLAGERDVEAGAVSFRFRDGTQVNGVPVADAVETIV 663


>gi|307150016|ref|YP_003885400.1| threonyl-tRNA synthetase [Cyanothece sp. PCC 7822]
 gi|306980244|gb|ADN12125.1| threonyl-tRNA synthetase [Cyanothece sp. PCC 7822]
          Length = 608

 Score =  558 bits (1438), Expect = e-156,   Method: Composition-based stats.
 Identities = 249/593 (41%), Positives = 364/593 (61%), Gaps = 16/593 (2%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           I++    +  +L  IRH+ +HIMA AVQ ++P+ QV IGP  E+GFYYDFD  QPFS ++
Sbjct: 16  IKLPKTSESDNLKRIRHTASHIMAMAVQQLFPKAQVTIGPWTENGFYYDFDTPQPFSEED 75

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L  I+K+M +II R  P +++ +S ++A    ++  E YK+EILE I  +E +TLY  G+
Sbjct: 76  LKAIKKEMVKIIKRKLPVIREEVSRQEAERRIKAINEPYKLEILEGI--QEPITLYHLGD 133

Query: 179 -WFDLCRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
            W+DLC GPHV ST  +  K  +L  VAGAYWRGD  +  L RIYGTAW T ++L +Y  
Sbjct: 134 QWWDLCAGPHVESTADIDPKAIELETVAGAYWRGDETKAQLQRIYGTAWETPEQLAEYKR 193

Query: 237 FLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEI 294
             EE+ KRDHRKL RE+ LF  ++  G G+  W  KG  I  TL  +++  ++K  Y  +
Sbjct: 194 RKEEALKRDHRKLGRELGLFIFSDVVGPGLPLWTPKGTIIRTTLEEFLKKEQVKRGYLPV 253

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK-DLRTFALKPMNCPGHVAVFNHGLK 353
            TP +    L++ SGHW +Y+ +MF +   D+        F LKPMNCP H+ ++   L+
Sbjct: 254 VTPHLARVDLFKISGHWQNYKEDMFPMMAEDEESALHEIGFVLKPMNCPFHIQIYKSELR 313

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYR+LP+RLAEFG+VYR E SG L GL RVRGFT DD+H+F T EQ+  E L + +LI+S
Sbjct: 314 SYRDLPMRLAEFGTVYRYEQSGELGGLTRVRGFTVDDSHLFVTPEQLEEEFLSVVDLILS 373

Query: 414 IYKDFGFEKIMVKLSTRPE---KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
           ++K    +    +LS R     K +G D +W+ AEN ++  +  +       +      G
Sbjct: 374 VFKSLQLKNFKARLSFRDPASDKYIGGDDVWNKAENAIRSAVQKMN------MEHFEAPG 427

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           E AFYGPK ++I +DA+ R+WQ GT+QVD+NLP RF+  YV     +  PVMIHRA FGS
Sbjct: 428 EAAFYGPKLDFIFQDALEREWQLGTVQVDYNLPERFDLEYVAEDGSRKRPVMIHRAPFGS 487

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
           +ER +GI+IE + G+ PLWL+PIQ  +  ++   +++A+E+A  L S  +  E D   E 
Sbjct: 488 LERLVGILIEEYAGDFPLWLAPIQVRLLPVSDPQLDFAKEVAAQLLSQGIRAEADTSGER 547

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +   IR    +KIP++ + G KE    ++ IR   S     +++ + I  +T+
Sbjct: 548 LGKMIRNAEKQKIPVMAVVGAKEVESNTLSIRTRASGELGTIAVSEVIEKVTE 600


>gi|325672628|ref|ZP_08152324.1| threonine--tRNA ligase [Rhodococcus equi ATCC 33707]
 gi|325556505|gb|EGD26171.1| threonine--tRNA ligase [Rhodococcus equi ATCC 33707]
          Length = 683

 Score =  558 bits (1437), Expect = e-156,   Method: Composition-based stats.
 Identities = 241/658 (36%), Positives = 371/658 (56%), Gaps = 39/658 (5%)

Query: 16  NFPVHATGSDVAESIS-RSLAKKAVAVA--INGKVCDLS-DPVREGSIEIITPEDPRSLA 71
             P   T                A+ V    +G + DLS  P  +  +E +  +     +
Sbjct: 14  QVPAGTTAGTAVRDAGLPGKGPDAIVVVRDADGNLKDLSWTPDVDVEVEAVAADTEDGRS 73

Query: 72  VIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIA 131
           VIRHS AH++A+AVQ  +PE ++ IGP I+DGFYYDF  E+PF+ ++LA++EK+M++I+ 
Sbjct: 74  VIRHSAAHVLAQAVQQEFPEAKLGIGPPIKDGFYYDFQVERPFTPEDLAKLEKRMKKIVK 133

Query: 132 RDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE------------- 178
               F ++ +  +      E   E +K+E+++     ++  +   G              
Sbjct: 134 DAQRFSRRVV-EDLEDARTELANEPFKLELIDDKSGIDDPEVMEVGGGELTIYDNLNPRT 192

Query: 179 ----WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
               W DLCRGPH+ +T  +  F K+ + + AYWRGD +R  L RIYGTAW + + L ++
Sbjct: 193 GEVIWKDLCRGPHIPTTKYIPAF-KITRSSAAYWRGDQSREDLQRIYGTAWESTEALDKH 251

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYE 292
           L  L E+E+RDHRKL  E+DLF   ++ GSG+  +H KG  I Q + +Y R R +++ YE
Sbjct: 252 LELLAEAERRDHRKLGAELDLFSFPDELGSGLPVFHPKGGIIRQEMENYSRKRHVEEGYE 311

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD-------LRTFALKPMNCPGHV 345
            + +P +   HL++ SGH D Y+  MF     D+ + +        + + LKPMNCP H 
Sbjct: 312 FVYSPHITKGHLYEVSGHLDWYKDGMFPAMHIDEELNEDGTVRKPGQDYYLKPMNCPMHN 371

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            VF    +SYRELP+RL EFGSVYR E SG +HGL RVRG TQDDAH++CTKEQM +E  
Sbjct: 372 LVFGSRGRSYRELPLRLFEFGSVYRYEKSGVVHGLTRVRGMTQDDAHIYCTKEQMRDELT 431

Query: 406 KIHNLIISIYKDFGFEKIMVKLS-TRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
                ++ + KD+G +   ++LS   P+K VG DALW++A   ++ V +         +N
Sbjct: 432 TTLKFVLGLLKDYGLDDFYLELSTKNPDKFVGDDALWEEATETLREVGEASG------LN 485

Query: 465 TGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIH 524
                G  AFYGPK    ++DA+GR WQ  TIQ+DFNLP RF+  Y  S   K  PVMIH
Sbjct: 486 LVPDPGGAAFYGPKISVQVQDALGRSWQMSTIQLDFNLPERFDLEYTGSDGTKQRPVMIH 545

Query: 525 RAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIET 584
           RA+FGSIERF G++ E++ G  P WL+P+Q +   +  +  ++  ++   LK+  +  + 
Sbjct: 546 RALFGSIERFFGVLTEHYAGAFPAWLAPVQVVGIPVAEAFEDHLFDVVKQLKAAGVRADV 605

Query: 585 DFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           D  ++ +  KIR H+ +K+P +++ G+++    ++  R    T    V + DA+  + 
Sbjct: 606 DVSDDRMQKKIRNHTTQKVPFMLLAGERDVEAGAVSFRFRDGTQVNGVPVADAVETIV 663


>gi|297155818|gb|ADI05530.1| threonyl-tRNA synthetase [Streptomyces bingchenggensis BCW-1]
          Length = 659

 Score =  558 bits (1437), Expect = e-156,   Method: Composition-based stats.
 Identities = 258/664 (38%), Positives = 379/664 (57%), Gaps = 41/664 (6%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEI 61
           SD++++    S +   V  TG+  A        +  VA  + G++ DL+  + EG  +E 
Sbjct: 2   SDVRVSIQRDSEREERVVTTGTTAAVLFDGD--RSIVAARVAGQLKDLAYELAEGDEVEP 59

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +       L ++RHS AH+MA+AVQ ++PE ++ IGP I+DGFYYDFD E PF  D+L +
Sbjct: 60  VEITSQDGLDILRHSTAHVMAQAVQELFPEAKLGIGPPIKDGFYYDFDVETPFHPDDLKR 119

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-------------ESIPAK 168
           IEKKMQEII R   F ++ ++ E ARE  E   E YK+E++              +    
Sbjct: 120 IEKKMQEIIKRGQRFSRRPVTDEAARE--ELSAEPYKLELIGLKGSAADAAEGASAEVGA 177

Query: 169 ENVTLYRQGE-------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIY 221
             +T+Y   +       W DLCRGPH+ +T  +  F KLM+ A AYWRG    P L RIY
Sbjct: 178 GELTIYDNLDAKSGELCWRDLCRGPHLPTTRNIPAF-KLMRSAAAYWRGSEKNPQLQRIY 236

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLI 280
           GTAW T+ EL  YL FL E+EKRDHRKL  E+DLF   ++ GSG+  +H KG  I + + 
Sbjct: 237 GTAWPTKDELKAYLDFLVEAEKRDHRKLGSELDLFSFPDELGSGLAVFHPKGGIIRREME 296

Query: 281 SYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPM 339
           +Y R++ ++  YE +NTP +    L++ SGH   Y   MF          + + + LK M
Sbjct: 297 AYSRKRHEESGYEFVNTPHITKAKLFETSGHLPHYMEGMFPPMEF-----EGQDYYLKAM 351

Query: 340 NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQ 399
           NCP H  +F    +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDD+H++CT+EQ
Sbjct: 352 NCPMHNLIFRARGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRTRGFTQDDSHIYCTREQ 411

Query: 400 MFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE--KRVGSDALWDDAENIMKGVLDTIKN 457
             +E   +   ++ + +D+G     ++LSTR +  K +GSD  W +A ++++   +    
Sbjct: 412 APDELDSLLTFVLDLLRDYGLNDFYLELSTRDDSDKFIGSDEQWAEATDMLRQAAE---- 467

Query: 458 SSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK 517
             +  +   +  G  A+YGPK     KDAIGR WQ  TIQVDFN P+RF   Y  +   +
Sbjct: 468 --KQGLELVMDPGGAAYYGPKISVQAKDAIGRTWQMSTIQVDFNQPARFELEYTAADGSR 525

Query: 518 CHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKS 577
             P+M+HRA+FGSIERF  +++E++ G  P+WL+P+QA+   I  S V Y +E A   K+
Sbjct: 526 QQPIMLHRALFGSIERFFAVLLEHYAGAFPVWLAPVQAVGIPIGDSHVPYLEEFAAEAKA 585

Query: 578 HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
             L +E D  ++ +  KIR     KIP +II GD + +  ++  R    +    +   +A
Sbjct: 586 KGLRVEVDSSSDRMQKKIRNAQRAKIPFMIIAGDDDMAAGAVSFRYRDGSQKNGIPRYEA 645

Query: 638 IPIL 641
           I  +
Sbjct: 646 IAEI 649


>gi|88856273|ref|ZP_01130933.1| threonyl-tRNA synthetase [marine actinobacterium PHSC20C1]
 gi|88814592|gb|EAR24454.1| threonyl-tRNA synthetase [marine actinobacterium PHSC20C1]
          Length = 653

 Score =  558 bits (1437), Expect = e-156,   Method: Composition-based stats.
 Identities = 247/656 (37%), Positives = 369/656 (56%), Gaps = 48/656 (7%)

Query: 22  TGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPEDPRSLAVIRHSCAHI 80
           TG D+         +  VA+ +NG++ DL++ V +  ++E +T + P  L ++RHS AH+
Sbjct: 4   TGFDLYTD------RNVVAMRVNGELKDLAETVTDTDAVEAVTIDSPDGLNILRHSAAHV 57

Query: 81  MAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQY 140
            A+A+Q+I PE ++ IGP + DGFYYDFD E+PF+ ++L  I K M  II +   F ++ 
Sbjct: 58  AAQAIQTINPEAKLGIGPPVTDGFYYDFDVEEPFTPEDLKAITKAMDRIIRQGQRFQRRV 117

Query: 141 LSHEKARELFESKKEAYKVEILESIPA----------------KENVTLYRQGE------ 178
           ++  +ARE  E   E YK+E++    A                   +T+Y   +      
Sbjct: 118 VTEAEARE--ELANEPYKLELIGLKGAVSEGDADSDNESVEVGGTELTIYDNIDGKTGEV 175

Query: 179 -WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
            W DLCRGPH+ +T  +   + L + A AYWRG      L R+YGTAW T+ EL +Y   
Sbjct: 176 YWKDLCRGPHLPNTRMIGNGWSLTRTAAAYWRGSEKNKQLQRVYGTAWPTKDELREYQAR 235

Query: 238 LEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEIN 295
            EE+ KRDHRKL  E+DLF   ++ GSG+  +H KG  I   + +Y R R +++ Y  +N
Sbjct: 236 QEEALKRDHRKLGAELDLFSFPDEIGSGLAVFHPKGGIIRHEMENYSRTRHLQEGYSFVN 295

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDT-------IKDLRTFALKPMNCPGHVAVF 348
           TP +  + L++ SGH   Y+  MF     D+         +    + LKPMNCP H+ ++
Sbjct: 296 TPHITKEALFETSGHLGWYKDGMFPPMHLDEARNEEGEITRQGADYYLKPMNCPMHILIY 355

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
               +SYRELP+RL EFG+VYRNE SG +HGL RVRG T DDAH+F TKE M  E     
Sbjct: 356 KSSGRSYRELPMRLFEFGTVYRNEKSGVIHGLTRVRGLTMDDAHIFTTKEGMKAELTNTL 415

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGV 467
           N ++S+ +D+G     ++LST+  +  VG D +WD+A   +  V      +++  +    
Sbjct: 416 NFVLSLLRDYGLTDFYLELSTKDPEKYVGDDEIWDEATQTLAEV------AAESGLELVP 469

Query: 468 LLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAV 527
             G  AFYGPK     +DAIGR WQ  T+Q+DFNLP RF+  Y  +   +  PVMIHRA+
Sbjct: 470 DPGGAAFYGPKISVQARDAIGRTWQMSTVQLDFNLPERFDLEYTAADGSRQRPVMIHRAL 529

Query: 528 FGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR 587
           FGSIERF G++ E++ G  P+WLSP+Q +   +  +  EY   + + LK+  +  E D  
Sbjct: 530 FGSIERFFGVLTEHYAGAFPVWLSPVQVVGIPVAEAYEEYLGGVVDQLKALGVRAELDAS 589

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +E +  KIR H+  KIP  +I G+++ +  SI  R    +    + + DAI  +T 
Sbjct: 590 SERMQKKIRTHTKSKIPFQLIAGEQDQAAGSISFRFRDGSQENGIPIADAIARITD 645


>gi|261337772|ref|ZP_05965656.1| threonine--tRNA ligase [Bifidobacterium gallicum DSM 20093]
 gi|270277225|gb|EFA23079.1| threonine--tRNA ligase [Bifidobacterium gallicum DSM 20093]
          Length = 681

 Score =  557 bits (1436), Expect = e-156,   Method: Composition-based stats.
 Identities = 254/668 (38%), Positives = 368/668 (55%), Gaps = 43/668 (6%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI-EII 62
            I LT  DG  K      TG ++         K  +AV +NG+  DL  P+ +G I E I
Sbjct: 5   SISLTI-DGEQKEVDAGLTGVELFSD-----NKDIIAVRLNGEPRDLYTPLNDGDIVESI 58

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
             + P  LA++RHS  H+MA+AVQ + P+ ++ IGP+IE+GFYYDFD E+PF+ D+L  I
Sbjct: 59  MLDSPDGLAIMRHSATHVMAQAVQELRPDAKLGIGPVIENGFYYDFDVEEPFTPDDLKTI 118

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-----------ENV 171
           EK MQ II     F ++ ++ ++A +      + YK+E++E   A            + +
Sbjct: 119 EKTMQRIIKSSQRFQRRVVTEQEALD--AEADQPYKIELIEDKEAALDTEAAQDISHKEL 176

Query: 172 TLYRQGE------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAW 225
           + Y   +      W DLCRGPH+ +T  +K F KL + A AYW+G    PML RIYG A+
Sbjct: 177 SFYDNIDREGNVVWTDLCRGPHLPNTRFIKAF-KLERAAAAYWKGSEANPMLQRIYGVAF 235

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR 284
            T+ EL  Y   +EE+ KRDHRKL +EMDLF   ++ G G+  +H KG  I   +  Y R
Sbjct: 236 ATKDELKAYQQRMEEAAKRDHRKLGQEMDLFSFPDEIGPGLAVFHPKGAAIINAMEDYSR 295

Query: 285 R-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT-------IKDLRTFAL 336
               +  Y  + TP +    L++ SGH   Y+  M+     D+        +K    + L
Sbjct: 296 DMHRRHHYSFVQTPHITKGKLYETSGHLQWYKDGMYPAMHLDEEKDAEGNIVKQGFDYYL 355

Query: 337 KPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT 396
           KPMNCP H  +F    +SYRELP+RL EFG+VYR E SG +HGL RVRG TQDD+H++CT
Sbjct: 356 KPMNCPMHNLIFKSRQRSYRELPLRLFEFGTVYRYEKSGVVHGLTRVRGLTQDDSHIYCT 415

Query: 397 KEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDTI 455
           +EQM +E   +   ++ + KD+G     ++LST+ E   VGSD +W++A N +  V    
Sbjct: 416 REQMKDELKNLLQFVLKLLKDYGLNDFYLELSTKDEHKFVGSDEIWEEATNTLAEVAKDS 475

Query: 456 KNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS 515
                  +      G  AFYGPK     +DAIGR WQ  TIQ+DFNLP RF   Y+    
Sbjct: 476 G------LELVADPGGAAFYGPKISVQARDAIGRTWQVSTIQLDFNLPERFGLEYIAKDG 529

Query: 516 EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLL 575
               PVMIHRA+FGSIERF  I++E++ G LP W++P+QA+   +      + Q   + L
Sbjct: 530 THQRPVMIHRALFGSIERFFAILLEHYAGALPAWIAPVQALGVPVADEFAPHLQRFMDSL 589

Query: 576 KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
           +   + +E D  ++    KIR  S  K+P I+I G+++ S  ++  R    +    V + 
Sbjct: 590 EEDLVRVEIDLSDDRFGKKIRNASKSKVPFILIVGEEDMSNNAVSFRFRDGSQLNGVPVD 649

Query: 636 DAIPILTK 643
           DA   + K
Sbjct: 650 DARQWILK 657


>gi|213692035|ref|YP_002322621.1| threonyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
           ATCC 15697]
 gi|254783509|sp|B7GR13|SYT_BIFLI RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|213523496|gb|ACJ52243.1| threonyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
           ATCC 15697]
 gi|320458147|dbj|BAJ68768.1| threonyl-tRNA synthase [Bifidobacterium longum subsp. infantis ATCC
           15697]
          Length = 677

 Score =  557 bits (1436), Expect = e-156,   Method: Composition-based stats.
 Identities = 241/667 (36%), Positives = 366/667 (54%), Gaps = 43/667 (6%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           + I +T  +G  K      TG ++         K  +AV ING+  DL  P+ +G ++E 
Sbjct: 4   ATISITV-NGEAKEVEATTTGVELFAE-----DKNIIAVKINGENRDLYTPLADGDTVEP 57

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           IT +    LA++RHS  H+MA+AVQ ++P  ++ +GP+I+DGFYYDF  ++PF+ ++L  
Sbjct: 58  ITLDSEDGLAIMRHSATHVMAQAVQEVYPNAKLGVGPVIKDGFYYDFQVDKPFTPEDLKD 117

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPA-----------KEN 170
           IEK++Q II     F ++ ++ E+A +  E   + +K+E++E   A           ++ 
Sbjct: 118 IEKRIQRIIKSSQSFRRRSVTEEEALK--EEADQPFKIELIEDKEAHLDPAAATEISEKE 175

Query: 171 VTLYRQGE------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTA 224
           ++ Y   +      W DLCRGPH+ +T  +K F K+ + A AYWRG    P + RIYGTA
Sbjct: 176 LSFYDNVDRDGNVVWKDLCRGPHLPNTRYIKAF-KIERSAAAYWRGSEKNPTMQRIYGTA 234

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM 283
           W T+ +L  Y   LEE+ KRDHRKL  EMDLF   ++ G G+  +H KG  +   +  Y 
Sbjct: 235 WATKDDLKAYQTRLEEAAKRDHRKLGAEMDLFSFPDEIGPGLAVFHPKGAAVINAMEDYS 294

Query: 284 RR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT-------IKDLRTFA 335
           R    K  Y  + TP +    L++ SGH   Y+  M+     D+         K    + 
Sbjct: 295 REMHRKHHYSFVQTPHITKGGLYETSGHLHWYKDGMYPAMHLDEEYDADGNVTKPGFDYY 354

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC 395
           LKPMNCP H  +F    +SYRELP+RL EFG+VYR E SG +HGL RVRG TQDD+H++C
Sbjct: 355 LKPMNCPMHNLIFKSRQRSYRELPLRLFEFGTVYRYEKSGEVHGLTRVRGLTQDDSHIYC 414

Query: 396 TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDT 454
           T+EQM +E   +   ++++ KDFG     ++LST+     VGSD +W++A   ++ V + 
Sbjct: 415 TREQMKDELTSLLTFVLNLLKDFGLSDFYLELSTKDPDKYVGSDEIWEEATRTLREVAEA 474

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH 514
                   ++     G  AFYGPK     +DAIGR WQ  TIQ+DFNLP RF   Y+   
Sbjct: 475 ------SHLDLVADPGGAAFYGPKISVQARDAIGRTWQVSTIQLDFNLPERFQLEYIAKD 528

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANL 574
                PVMIHRA+FGSIERF  +++E++ G  P WL+P+Q +   +      +       
Sbjct: 529 GTHQRPVMIHRALFGSIERFFAVLLEHYAGAFPAWLAPVQVLGVPVADEFAPHLAGFVKS 588

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           L+   +  E D+ ++    KIR  S  K+P I+I G+++ +  ++  R    +    V +
Sbjct: 589 LEDEMVRCEIDYSDDRFGKKIRNASKSKVPFILIVGEEDMNNNAVSFRFRDGSQLNGVPV 648

Query: 635 LDAIPIL 641
             A   +
Sbjct: 649 DKAREQI 655


>gi|209523462|ref|ZP_03272017.1| threonyl-tRNA synthetase [Arthrospira maxima CS-328]
 gi|209496204|gb|EDZ96504.1| threonyl-tRNA synthetase [Arthrospira maxima CS-328]
          Length = 622

 Score =  557 bits (1436), Expect = e-156,   Method: Composition-based stats.
 Identities = 278/616 (45%), Positives = 376/616 (61%), Gaps = 44/616 (7%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L  IRH+CAHI+A AVQ ++PE +VAIGP  + GFYYDFD+++PF+ ++L QI K+
Sbjct: 18  DGEKLRRIRHTCAHILAMAVQKLFPETKVAIGPTTDTGFYYDFDRKEPFTPEDLGQITKE 77

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE------- 178
           M+ II  + P +++ ++ E+ R   E   E  K+EIL+SIP  E +T Y  G        
Sbjct: 78  MKRIIKGNLPVIREEVNREQIRAEIEKLNEPLKLEILDSIPETETITRYFIGSPDMGRTN 137

Query: 179 -------------------WFDLCRGPHVRSTGQVKK-FFKLMKVAGAYWRGDSNRPMLS 218
                              W+DLC GPH+ STG++      L  VAGAYWRGD   P L 
Sbjct: 138 HPEVEPSLISPVVIPTQEFWWDLCAGPHLNSTGEINPDALALESVAGAYWRGDETLPQLQ 197

Query: 219 RIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQ 277
           RIYGTAW T +EL  Y    EE++KRDHRKL +E+DLF I ED G G++FWH KG ++  
Sbjct: 198 RIYGTAWETPEELEYYQQQKEEAKKRDHRKLGQELDLFSIQEDAGGGLVFWHPKGSRMRL 257

Query: 278 TLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFAL 336
            +  Y R+  ++D YE + +P + +  LW+ SGH+D YR NMF     D    + +++ L
Sbjct: 258 LIEDYWRQAHLQDGYELLYSPHIANLELWKTSGHYDFYRENMF-----DQIEIENQSYQL 312

Query: 337 KPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT 396
           KPMNCP HV  +   L SYRELP+R AE G+VYR E SG LHGLMRVRGFTQDDAH+FC 
Sbjct: 313 KPMNCPFHVLTYQSHLHSYRELPIRWAELGTVYRYERSGVLHGLMRVRGFTQDDAHIFCL 372

Query: 397 KEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIK 456
            EQ+ +E L + NL   I  DFGF K  V LSTRP K VG+DA+W  A + +   L+T  
Sbjct: 373 PEQVADEILGVLNLTEKILSDFGFSKYEVNLSTRPSKSVGNDAVWQLATDALIAALNT-- 430

Query: 457 NSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE 516
                  +     G GAFYGPK +  ++DAIGR WQC TIQVDFNLP RFN  YV +   
Sbjct: 431 ----KGWDYVTDEGGGAFYGPKIDIKIQDAIGRLWQCSTIQVDFNLPERFNMEYVAADGS 486

Query: 517 KCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLK 576
           +  P+MIHRA+FGS+ERF GI+IEN+ G+ PLWL+P+Q  V  ++    +YAQ IA  L+
Sbjct: 487 RQRPIMIHRAIFGSLERFFGILIENYAGDFPLWLAPVQVRVLAVSDRFRDYAQSIAQSLR 546

Query: 577 SHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
             ++  E D   E +  +IR   ++KIP+ ++ G +E   +S+ +R   S     ++L  
Sbjct: 547 QQNIRAEVDNTGERLGKQIRNSELEKIPVTVVIGQRELDNQSLSVRTRSSGDLGTMTL-- 604

Query: 637 AIPILTKESLPPDCQK 652
             P LT+E L    +K
Sbjct: 605 --PQLTEEILKAIAEK 618


>gi|71033673|ref|XP_766478.1| threonyl-tRNA synthetase [Theileria parva strain Muguga]
 gi|68353435|gb|EAN34195.1| threonyl-tRNA synthetase,  putative [Theileria parva]
          Length = 779

 Score =  557 bits (1436), Expect = e-156,   Method: Composition-based stats.
 Identities = 233/687 (33%), Positives = 365/687 (53%), Gaps = 61/687 (8%)

Query: 4   DIKLTF--PDGSI----KNFPVHATGSDVAESISRSLAKKAVAVAI-------------- 43
           DI L     DG +    K+F    T  +V  ++ +  AKKAV   +              
Sbjct: 109 DISLVLVTDDGEVSLSGKSF--LTTPYNVLYALDKKRAKKAVVAKVLYENKLSESFADVD 166

Query: 44  --NGK-------VCDLSDPVRE-GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQ 93
             N +       + D+  P  +   +E +     +   V  HS AHI+  A+++ +    
Sbjct: 167 EDNSENSTSEWVLWDMHRPFEDSCKVEFLDFNSEQGQHVYWHSSAHILGSALETCFGG-F 225

Query: 94  VAIGPIIEDGFYYDFD-KEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFES 152
           + IGP +  GFYYD          +++  +   ++ +   +SPF +   + E+A EL + 
Sbjct: 226 LTIGPALSSGFYYDVYLGNNSVKPEDVKPLLSHVEALTNLNSPFERLVCTKEEALELMKY 285

Query: 153 KKEAYKVEILES-IPAKENVTLYRQGEWFDLCRGPHVRSTGQVK-KFFKLMKVAGAYWRG 210
               +KV+++++ +P  EN   YR G++ DLCRGPH+ +T  V+   F + K++ +YW  
Sbjct: 286 --NPFKVQLIKNKVPDGENTVCYRCGDFVDLCRGPHIPTTSMVRANSFDVTKISSSYWLS 343

Query: 211 DSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSG-VIFWH 269
           ++    L R+YG ++  +++L  Y + +EE+++RDHR +  ++ LF+     S    FW 
Sbjct: 344 NAKSDTLQRVYGISFPEKEQLKMYKHRIEEAKQRDHRTIGTDLKLFYFDTVHSPGSCFWL 403

Query: 270 RKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTI 328
             G KI+  L+ +MR   +   Y+E+ TP +    LW+QSGH+D+Y+ NM+     D   
Sbjct: 404 PNGAKIYNRLVEFMRDNYRIRGYQEVITPNIFSCDLWKQSGHYDNYKENMYLFNLED--- 460

Query: 329 KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQ 388
                + +KPMNCPGH  +F H   SY++LP+RLA+FG ++RNE +GSL GL RVR F Q
Sbjct: 461 ---TEWGMKPMNCPGHCLMFKHLFLSYKQLPLRLADFGVLHRNELTGSLSGLTRVRRFQQ 517

Query: 389 DDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIM 448
           DDAH+FCT+EQ+  E L I   I  +Y  F F     KLST+P K +G + LW+ AE  +
Sbjct: 518 DDAHIFCTREQIMEEVLNILTFIGKVYSLFDFRY-EFKLSTKPAKALGDNELWEVAEKSL 576

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
           +  L+             +  G+GAFYGPK + +L D + R+ QCGTIQ+DFNLP RFN 
Sbjct: 577 EEALNKTGAKW------ILNPGDGAFYGPKIDVVLFDCLDREHQCGTIQLDFNLPIRFNL 630

Query: 509 FYVNSHSEKC--------HPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTI 560
            Y +               PV+IHRA+FGSIERF+ I++E  KG LP WLSP Q +   I
Sbjct: 631 EYRDKSESSAENVRCGFNRPVIIHRAIFGSIERFVAIVLEQTKGKLPFWLSPNQLLFIPI 690

Query: 561 TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
           T S ++YA E+     +   +++ D  N TIN KI+    ++   + I GD+E   R++ 
Sbjct: 691 TDSHLDYALELYEKFNALGYNVDVDRSNNTINKKIKFGQQQRWNYMGIVGDREVETRTVS 750

Query: 621 IRRFGSTTTQKVSLLDAIPILTKESLP 647
           +R   S     VSL + + +   + L 
Sbjct: 751 LRPRDSDEQNVVSLDELVKLFESQQLK 777


>gi|220905829|ref|YP_002481140.1| threonyl-tRNA synthetase [Cyanothece sp. PCC 7425]
 gi|219862440|gb|ACL42779.1| threonyl-tRNA synthetase [Cyanothece sp. PCC 7425]
          Length = 610

 Score =  557 bits (1436), Expect = e-156,   Method: Composition-based stats.
 Identities = 238/599 (39%), Positives = 364/599 (60%), Gaps = 15/599 (2%)

Query: 53  PVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ 112
           PV    I +    +  +L  IRH+ +H+MA AVQ ++P+ QV IGP IE+GFYYDFD   
Sbjct: 11  PVSIAKIALPRTSESETLKKIRHTASHVMAMAVQKLFPKAQVTIGPWIENGFYYDFDNPD 70

Query: 113 PFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVT 172
           PF+  +L  I+K+M +II R  P +++ +S E+A    ++  E YK+EIL  I + E +T
Sbjct: 71  PFTEKDLKAIQKEMVKIIKRKLPVIREEISREEAERRIKAINEPYKLEILADIQS-EPIT 129

Query: 173 LYRQGE-WFDLCRGPHVRSTGQVKK-FFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQE 230
           +Y  G+ W+DLC GPH+ +TG++      L  VAGAYWRGD  +  L RIYGTAW T ++
Sbjct: 130 IYHLGDQWWDLCAGPHLENTGELHPDAIALESVAGAYWRGDETKAQLQRIYGTAWETPEQ 189

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYM-RRKIK 288
           L +Y    EE+++RDHRKL +E+ LF  ++  G G+  W  KG  +  TL  ++ + ++K
Sbjct: 190 LAEYQRRKEEAQRRDHRKLGKELGLFIFSDLVGPGLPLWTPKGTILRSTLEDFLKQEQLK 249

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR-TFALKPMNCPGHVAV 347
             Y+ + +P +    L++ SGHW  Y+ +MF +   D+  +     F +KPMNCP H+ +
Sbjct: 250 RGYQPVVSPHIARVDLFKTSGHWQKYKEDMFPLMSEDEQERQSEVGFVMKPMNCPFHIQI 309

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
           +   L+SYR+LP+RLAEFG+VYR E SG L GL RVRGFT DD+H+F T  Q+ +E LK+
Sbjct: 310 YKSELRSYRDLPMRLAEFGTVYRYEQSGELGGLTRVRGFTVDDSHLFVTPSQLDDEFLKV 369

Query: 408 HNLIISIYKDFGFEKIMVKLSTRPEK---RVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            +LI+S++     +    +LS R       +GSD  W+ A+  ++  ++T+     + I 
Sbjct: 370 VDLILSVFAQLQLKNFKARLSFRDPNSDKYIGSDQAWEKAQTAIRQAVETLGMDHFEGI- 428

Query: 465 TGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIH 524
                GE AFYGPK ++I +DA+ R+WQ GT+QVD+NLP RF   YV     +  PVMIH
Sbjct: 429 -----GEAAFYGPKLDFIFQDALEREWQLGTVQVDYNLPERFELEYVAEDGSRQRPVMIH 483

Query: 525 RAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIET 584
           RA FGS+ER IGI+IE + G+ PLWL+P Q  + T+    + +A+++A  +++  + +  
Sbjct: 484 RAPFGSLERLIGILIEEYAGDFPLWLAPEQVRLLTVGDDQMPFARQVAEQMQALGVRVVI 543

Query: 585 DFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           D   + +  KIR    +KIP++ + G KE    S+ IR   +     +S+ + +  L K
Sbjct: 544 DTSGDRLPKKIRNAEKEKIPVMAVIGAKEVEADSLSIRTRAAGELGVISVPEVVERLAK 602


>gi|303310925|ref|XP_003065474.1| threonyl-tRNA synthetase, cytoplasmic, putative [Coccidioides
           posadasii C735 delta SOWgp]
 gi|240105136|gb|EER23329.1| threonyl-tRNA synthetase, cytoplasmic, putative [Coccidioides
           posadasii C735 delta SOWgp]
 gi|320034634|gb|EFW16577.1| threonyl-tRNA synthetase [Coccidioides posadasii str. Silveira]
          Length = 757

 Score =  557 bits (1435), Expect = e-156,   Method: Composition-based stats.
 Identities = 232/686 (33%), Positives = 359/686 (52%), Gaps = 63/686 (9%)

Query: 4   DIKLTF-----PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGK-VCDLSDPVR-E 56
           DI +T      P  ++      +T     + I + L+   V   ++GK + DL  P+  +
Sbjct: 76  DITVTLDVGDGPPATVIAKAWESTPGSFLKDIPKELSSNVVIAKLDGKQLWDLDRPLERD 135

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK--EQPF 114
             +  +  + P    V  HS AH++ EA +  +    ++ GP    GF+YD         
Sbjct: 136 CRVSYLPFDSPEGREVFWHSSAHVLGEAAECEY-GCMLSHGPPTAQGFFYDMALPDNGVV 194

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
              +   ++ +   I      F +  +S E  R++F   K  YK+  + ++   E+ T+Y
Sbjct: 195 KESDWPSLDSRSARIFKEKQSFDRLEVSKENLRKMFGYSK--YKMHYINNLVEGESSTVY 252

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
           R G   DLCRGPH+++TG++K   K+M+ + AY+ GD +   L RI G A+  ++ L ++
Sbjct: 253 RCGTLVDLCRGPHIQNTGKIK-AMKIMQNSSAYFLGDQSNDSLQRIRGVAFPDKKSLQEH 311

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEE 293
           L FLEE+EKR+H K+ +E +LF   E   G  F    G KIF  L   +R + +   Y+E
Sbjct: 312 LKFLEEAEKRNHLKIGKEQELFFFDEVSPGCPFLLPNGTKIFNALQKLLRTEYRKRGYQE 371

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           + +P + D  LW+ SGHW+ Y+ +MF +        + R +ALKPMNCPGH  +FNH  +
Sbjct: 372 VQSPNMYDVGLWRTSGHWNHYKDDMFKL------AVEKREWALKPMNCPGHCIMFNHRER 425

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYRELP+R+A+FG ++RNE SG+LHGL RVR F QDD H+FCT++Q+  E   + + + +
Sbjct: 426 SYRELPLRMADFGVLHRNEASGALHGLTRVRKFQQDDTHIFCTEDQITQEIEGLFDFLRA 485

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           IY  FGF    +KLSTRPEK +G    WD AE  +K  L   K S     +  +  G+GA
Sbjct: 486 IYGLFGF-SFKLKLSTRPEKYLGKLETWDFAEAQLKEALTRFKGS-----DWEIDEGDGA 539

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK---------------- 517
           FYGPK +  ++DA+ R++QC TIQ+D+ LP  F   Y+ +   K                
Sbjct: 540 FYGPKIDITIQDALKREFQCATIQLDYQLPQNFKLEYMTNEIAKPKAPEPKKEESGPREG 599

Query: 518 -----------------CHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTI 560
                              PVMIHRA+ GS ERF GI+IE+F G  P WLSP Q ++  +
Sbjct: 600 GDSKAADSDDGVPGPGRARPVMIHRAIIGSFERFFGILIEHFGGKWPFWLSPRQILIVPV 659

Query: 561 TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
             +  +Y +E+  +L+   L+++ D    T+  KIR   + +   I + G +E   R++ 
Sbjct: 660 MPAVYDYVEELQGILRGDKLNVDIDVSGNTLQKKIRNGQLAQYNFIFVVGAQEKETRTVN 719

Query: 621 IRRFGSTTTQK----VSLLDAIPILT 642
           IR     ++Q     V L +A   L 
Sbjct: 720 IRNRDDPSSQAKGSLVPLNEAREKLR 745


>gi|320536876|ref|ZP_08036869.1| threonyl-tRNA synthetase [Treponema phagedenis F0421]
 gi|320146259|gb|EFW37882.1| threonyl-tRNA synthetase [Treponema phagedenis F0421]
          Length = 583

 Score =  557 bits (1435), Expect = e-156,   Method: Composition-based stats.
 Identities = 274/585 (46%), Positives = 389/585 (66%), Gaps = 21/585 (3%)

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           +    L +IRHS AH+MA AV  ++   +VAIGP I+ GFYYDF+  +P + ++L  IEK
Sbjct: 4   KKSERLDMIRHSTAHVMAAAVTKLFKGTKVAIGPAIDYGFYYDFELPRPITDEDLLHIEK 63

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
           +M++I+  +  F K+ ++ + A  LF+   + +K E++  +PA E +++YR G++ DLCR
Sbjct: 64  EMRKIVNGNHDFTKEVVTRDAALALFK--DQPFKTELINELPADEEISIYRSGDFVDLCR 121

Query: 185 GPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           GPHV++T ++  + FKL K+AGAYWRGD  RPML+RIYGTAW    +L +YL  LE++EK
Sbjct: 122 GPHVQNTKEINAQSFKLTKIAGAYWRGDEKRPMLTRIYGTAWEKPADLKEYLAMLEDAEK 181

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL +   LFH+ E+  G IFWH  GW ++  + +Y+R KIK   Y E+ TP V+ Q
Sbjct: 182 RDHRKLGKSFGLFHLDEENPGQIFWHPNGWALYLLVQNYVREKIKADGYLEVKTPFVMPQ 241

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHW  YR NMF       T  + R FALKPMNCPGH+ +F  G+KSYR+LP+RL
Sbjct: 242 SLWERSGHWAKYRENMFI------TESEKRLFALKPMNCPGHIEIFKQGIKSYRDLPLRL 295

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF-- 420
           AEFGS  RNEPSGSLHG++RVRGF QDDAH+FCT+ Q+ +E  K   L+ ++Y DFGF  
Sbjct: 296 AEFGSCTRNEPSGSLHGILRVRGFVQDDAHIFCTEAQISSEVKKFCALLKNMYADFGFAE 355

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           + I+VK STRPEKRVG DA WD AE  +              +   V  GEGAFYGPK E
Sbjct: 356 DSILVKFSTRPEKRVGDDATWDRAEKALADACKDAG------LEYEVAEGEGAFYGPKLE 409

Query: 481 YILKDAIGRDWQCGTIQVDFNLP--SRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           + L D++GR+WQCGTIQVD+ LP   R NA Y+   ++K +PVM+HRA  GS+ERFIGI+
Sbjct: 410 FTLIDSLGREWQCGTIQVDYQLPSKERLNAEYIGEDNQKHNPVMLHRAALGSLERFIGIL 469

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE++ G  P WLSP+QA+V  +  +  +YA++ A  L +  L ++ D   + +N KIR++
Sbjct: 470 IEHYAGAFPPWLSPLQAVVIPVAPTFNDYAEKTAKDLAAQGLRVKADIDTDRMNAKIRKY 529

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             ++IP  +I G+KEA+  S+ +R       + ++    +  + +
Sbjct: 530 QEQRIPYQLIVGEKEAANGSLAVRIH-HGDQKTMTTEAFVNFIKE 573


>gi|50954739|ref|YP_062027.1| threonyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07]
 gi|71657985|sp|Q6AFC3|SYT_LEIXX RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|50951221|gb|AAT88922.1| threonyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07]
          Length = 695

 Score =  557 bits (1435), Expect = e-156,   Method: Composition-based stats.
 Identities = 236/652 (36%), Positives = 361/652 (55%), Gaps = 42/652 (6%)

Query: 25  DVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI-EIITPEDPRSLAVIRHSCAHIMAE 83
            VA+       +  VA+ +NG++ DL+  V    + E +T   P  LA++RHS AH++A+
Sbjct: 37  QVADGFEFFTDRSVVAMRVNGELKDLATIVTTTDVVEPVTIYSPDGLAILRHSTAHVLAQ 96

Query: 84  AVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSH 143
           AVQ++ PE ++ IGP I DGFYYDFD  +PF+ ++L  ++K+M  I      F+++ ++ 
Sbjct: 97  AVQTVNPEAKLGIGPPIADGFYYDFDVAEPFTPEDLKALDKEMSRIQRAGQRFVRRVVTD 156

Query: 144 EKARELFESKKEAYKVEILESIPAK----------------ENVTLYRQGE-------WF 180
           E+AR   E   E YK+E++    +                   +T+Y   +       W 
Sbjct: 157 EEARA--ELAGEPYKLELIGLKGSDAESAEVGGEESVEVGSGELTIYDNVDPKTGETIWK 214

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ +T  +   + L +VA AYWRG    P L RIYGTAW ++ EL  Y   +EE
Sbjct: 215 DLCRGPHLPNTRMIGNGWALTRVAAAYWRGSEKNPQLQRIYGTAWPSKDELRAYQTRMEE 274

Query: 241 SEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQ 298
           + KRDHRKL  E+DLF   ++ GSG+  +H KG  I + +  YMR R I + YE +NTP 
Sbjct: 275 AAKRDHRKLGVELDLFSFPDEIGSGLAVFHPKGGIIRKEIEDYMRDRLIANGYEMVNTPH 334

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDT-------IKDLRTFALKPMNCPGHVAVFNHG 351
           +   HL++ S H + YR  MF     D+         +  + + LKPMNCP H  +F   
Sbjct: 335 ITKGHLFETSQHLNWYREGMFPPMHLDEERDAEGNVTRQGQDYYLKPMNCPMHNLIFRSR 394

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI 411
            +SYRELP+RL+EFG+VYR E SG+L GL RVRG TQDDAH++ T+EQ+ +E  +    +
Sbjct: 395 GRSYRELPLRLSEFGTVYRYEKSGTLSGLTRVRGLTQDDAHIYVTEEQIRDEFARQLQFV 454

Query: 412 ISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
           +   + +G     ++LST+  +  VGSD  W+ A   ++ V      + +  +      G
Sbjct: 455 LETLRGYGLTDFYLELSTKDPEKYVGSDESWETATETLREV------AVESGLELVDDPG 508

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
             AFYGPK     +DAIGR WQ  T+Q+DFN P  F   Y  +   +  P MIHRA+ GS
Sbjct: 509 GAAFYGPKISVQARDAIGRTWQLSTVQLDFNQPELFELEYNAADGTRKQPAMIHRALLGS 568

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
           IERF  I++E+  G  P+WL+P Q +   +  +   +  ++   L++  +  E D  ++ 
Sbjct: 569 IERFFAILLEHHAGAFPVWLAPTQVVGIPVADAYGPFLDDVIAQLRARGVRAEVDHSDDR 628

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +  KIR H+  K+P  +I G+++AS  ++  R    T    V++ +AI  + 
Sbjct: 629 MQKKIRTHTKAKVPFQLIVGEEDASAGTVSFRFRDGTQLNGVAVDEAIERIV 680


>gi|67538984|ref|XP_663266.1| hypothetical protein AN5662.2 [Aspergillus nidulans FGSC A4]
 gi|40743565|gb|EAA62755.1| hypothetical protein AN5662.2 [Aspergillus nidulans FGSC A4]
 gi|259484865|tpe|CBF81451.1| TPA: threonyl-tRNA synthetase, putative (AFU_orthologue;
           AFUA_4G13700) [Aspergillus nidulans FGSC A4]
          Length = 722

 Score =  557 bits (1435), Expect = e-156,   Method: Composition-based stats.
 Identities = 230/679 (33%), Positives = 365/679 (53%), Gaps = 53/679 (7%)

Query: 4   DIKLTFP--DGSIKNFP---VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EG 57
           +I +T    DG+    P      T + + + + + ++   V   ++G++ DL  P+  E 
Sbjct: 54  EINVTLQLGDGNTTTIPSKAWETTPAQLLKHVPKEISADIVIAKVDGQLWDLGRPLEGEC 113

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK--EQPFS 115
           ++  +   DP    V  HS AH + EA +  +    ++ GP    GF+YD      +   
Sbjct: 114 TVSYVPFSDPEGREVFWHSSAHCLGEACECEY-GCMLSHGPPTPQGFFYDMAMPDNRVVK 172

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
             +   ++ +  +I      F +  ++ E  R++F   K  YK+  ++ +   E  T+YR
Sbjct: 173 ESDWKTLDNRANKIFKEKQSFDRLEVTKENLRKMFAYSK--YKLHYIDKLVTGEKSTVYR 230

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
            G   DLCRGPH++STG+VK F K+M+ + AY+ GD N   L RI G A+  ++++ ++L
Sbjct: 231 CGTLVDLCRGPHIQSTGKVKTF-KIMQNSSAYFLGDQNNDSLQRIRGVAFPDKKQMAEHL 289

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEI 294
            FLEE+EKR+H ++A+E +LF   +   G  F    G +IF  L S +R + +   Y+E+
Sbjct: 290 KFLEEAEKRNHLRIAKEQELFFFDDVSPGCPFLLPNGVRIFNALQSLLRSEYRKRGYQEV 349

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
            TP + D  +W+ SGHW  Y+ +MF +        + R +ALKPMNCPGH  +F H  +S
Sbjct: 350 QTPNMYDVGIWKTSGHWAHYKDDMFKLDV------EKREWALKPMNCPGHFVLFGHRERS 403

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YRELP+R+A+FG ++RNE SG+LHGL RVR F QDD H+FCT +Q+ +E   + + + SI
Sbjct: 404 YRELPLRIADFGVLHRNEASGALHGLTRVRKFQQDDTHIFCTHDQIESEIEGLFDFLQSI 463

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           Y  FGF   + KLSTRPEK +G    W+ AE  +K  +   K       +  +  G+GAF
Sbjct: 464 YGLFGFTFKL-KLSTRPEKYLGELETWNYAEEQLKKAMTKFKGD-----DWTIDEGDGAF 517

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE------------------ 516
           YGPK +  + DA+ R++QC TIQ+D+  P  F   Y+                       
Sbjct: 518 YGPKIDITIADALKREFQCATIQLDYQAPLNFKLEYMTGEKTQATQEEAKKEADPKSNEP 577

Query: 517 ---KCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIAN 573
              +  PV+IHRA+ GS ERF+GI+ E+F G  P W+SP Q ++  +  +  +YA+E+  
Sbjct: 578 APGRARPVVIHRAIIGSFERFLGIITEHFGGKWPFWISPRQVLIVPVMPAVNDYAREVQK 637

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK-- 631
           +L++  L ++ D    T+  KIR   + +   I++ G +E   RS+ IR    T++Q   
Sbjct: 638 ILQNDKLYVDVDVTGNTLQKKIRTGQLAQYNFILVVGAEEKESRSVNIRNRDDTSSQSRG 697

Query: 632 --VSLLDA---IPILTKES 645
             V L +A      L KE 
Sbjct: 698 VVVPLEEARQKFRALRKER 716


>gi|313126275|ref|YP_004036545.1| ser-tRNA(thr) hydrolase; threonyl-tRNA synthetase [Halogeometricum
           borinquense DSM 11551]
 gi|312292640|gb|ADQ67100.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Halogeometricum
           borinquense DSM 11551]
          Length = 641

 Score =  557 bits (1435), Expect = e-156,   Method: Composition-based stats.
 Identities = 257/655 (39%), Positives = 379/655 (57%), Gaps = 27/655 (4%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEI 61
           S++ +  PDGS  +    AT  DVA  I   L +  VA  ++G++ D + PV +G+ + I
Sbjct: 2   SELVVNLPDGSELSVEEGATVEDVAYEIGPGLGEDTVAGVVDGELVDKAAPVHDGAQVVI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +T +    L V+RH+ AH+ A+A+Q ++PE ++AIGP  ++GFYYD        +D+L  
Sbjct: 62  VTDQSDEYLRVLRHTAAHVFAQALQRLYPEAKLAIGPSTDEGFYYDV-TNVDLDADDLEA 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPA-KENVTLYRQGEWF 180
           IE +M+EII  D P  ++  S E A EL+E     YK +ILE+  A  + ++ Y QGE+ 
Sbjct: 121 IEDEMEEIIEEDLPVERELRSREDALELYEE--NPYKRDILENEAAGDDELSFYVQGEFE 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLC+GPHV STG++    +L+ ++ AYWRGD     L+R+YGTA+ ++++L +Y+    E
Sbjct: 179 DLCKGPHVESTGKIG-AVELLNISSAYWRGDEENETLTRVYGTAFESEKDLKEYMELRAE 237

Query: 241 SEKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           +E+RDHRK+ REMDLF I E  G G+  +H  G +I   L  +     +  DYE + TP 
Sbjct: 238 AEERDHRKIGREMDLFSIPEVTGPGLPLYHPNGKRILSELSEFAESLNLDADYEPVETPH 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW++SGH+D+Y  +MF +   D        + LKPMNCPGH  +F+    SYR+L
Sbjct: 298 LFRTELWKKSGHYDNYVDDMFLLDVND------EEYGLKPMNCPGHATIFDQNSWSYRDL 351

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           PVR  E G VYR E  G L GL RV  FT DD H+FC  EQ+  E  ++ N I  +   F
Sbjct: 352 PVRYFEDGKVYRKEQRGELSGLSRVWSFTIDDGHLFCRPEQIEQEIRQVMNSIYEVLDTF 411

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           G E  +  L+TRPEK VGSD +W+ +E+ ++ VL+         I+  +  G+GAFYGPK
Sbjct: 412 GLEAHVA-LATRPEKSVGSDEIWEQSESQLRSVLE------NQNIDYDLEPGDGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++  +DA+GR W   T+QVDFN+P RF+  Y    +E+  PVMIHRA++GS ERF  ++
Sbjct: 465 IDFSFEDALGRKWDGPTVQVDFNMPERFDLTYTGEDNEEHRPVMIHRALYGSYERFFMVL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+F G  P WL+P Q  +  I+   + YA  + N L      +  + R+ T+  KIRE 
Sbjct: 525 IEHFNGKFPFWLAPEQVRILPISDDQLGYAHRVKNELGD--FRVSVEDRSWTLGRKIREG 582

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE----SLPPD 649
               +P ++I G+ E    +I +R       Q VS+      L  E     L PD
Sbjct: 583 QEDNVPYMLIVGENEEESGTISVRDRQEREEQDVSIDAFREHLEAEYDEKRLEPD 637


>gi|119194837|ref|XP_001248022.1| threonyl-tRNA synthetase, cytoplasmic [Coccidioides immitis RS]
          Length = 757

 Score =  557 bits (1435), Expect = e-156,   Method: Composition-based stats.
 Identities = 231/686 (33%), Positives = 359/686 (52%), Gaps = 63/686 (9%)

Query: 4   DIKLTF-----PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGK-VCDLSDPVR-E 56
           DI +T      P  ++      +T     + I + L+   V   ++GK + DL  P+  +
Sbjct: 76  DITVTLDVGDGPPATVIAKAWESTPGSFLKDIPKELSSNVVIAKLDGKQLWDLDRPLERD 135

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK--EQPF 114
             +  +  +      V  HS AH++ EA +  +    ++ GP    GF+YD      +  
Sbjct: 136 CRVSYLPFDSAEGREVFWHSSAHVLGEAAECEY-GCMLSHGPPTAQGFFYDMALPDNRVV 194

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
              +   ++ +   I      F +  +S E  R++F   K  YK+  + ++   E+ T+Y
Sbjct: 195 KESDWPSLDSRSARIFKEKQSFDRLEVSKENLRKMFSYSK--YKMHYINNLVEGESSTVY 252

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
           R G   DLCRGPH+++TG++K   K+M+ + AY+ GD +   L RI G A+  ++ L ++
Sbjct: 253 RCGTLVDLCRGPHIQNTGKIK-AMKIMQNSSAYFLGDQSNDSLQRIRGVAFPDKKSLQEH 311

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEE 293
           L FLEE+EKR+H K+ +E +LF   E   G  F    G KIF  L   +R + +   Y+E
Sbjct: 312 LKFLEEAEKRNHLKIGKEQELFFFDEVSPGCPFLLPNGTKIFNALQKLLRTEYRKRGYQE 371

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           + +P + D  LW+ SGHW+ Y+ +MF +        + R +ALKPMNCPGH  +FNH  +
Sbjct: 372 VQSPNMYDVGLWRTSGHWNHYKDDMFKL------AVEKREWALKPMNCPGHCIMFNHRER 425

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYRELP+R+A+FG ++RNE SG+LHGL RVR F QDD H+FCT++Q+  E   + + + +
Sbjct: 426 SYRELPLRMADFGVLHRNEASGALHGLTRVRKFQQDDTHIFCTEDQITQEIEGLFDFLRA 485

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           IY  FGF    +KLSTRPEK +G    WD AE  +K  L   K S     +  +  G+GA
Sbjct: 486 IYGLFGF-SFKLKLSTRPEKYLGKLETWDFAEAQLKEALTRFKGS-----DWEIDEGDGA 539

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK---------------- 517
           FYGPK +  ++DA+ R++QC TIQ+D+ LP  F   Y+ +   K                
Sbjct: 540 FYGPKIDITIQDALKREFQCATIQLDYQLPQNFKLEYMTNEIAKPKAPEPKKEESGPREG 599

Query: 518 -----------------CHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTI 560
                              PVMIHRA+ GS ERF GI+IE+F G  P WLSP Q ++  +
Sbjct: 600 GDSKAADSDDGVPGPGRARPVMIHRAIIGSFERFFGILIEHFGGKWPFWLSPRQILIVPV 659

Query: 561 TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
             +  +Y +E+  +L+   L+++ D    T+  KIR   + +   I + G +E   R++ 
Sbjct: 660 MPAVYDYVEELQGILRGDKLNVDIDVSGNTLQKKIRNGQLAQYNFIFVVGAQEKETRTVN 719

Query: 621 IRRFGSTTTQK----VSLLDAIPILT 642
           IR     ++Q     V L +A   L 
Sbjct: 720 IRNRDDPSSQAKGSLVPLNEAREKLR 745


>gi|172036410|ref|YP_001802911.1| threonyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
 gi|171697864|gb|ACB50845.1| threonyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
          Length = 666

 Score =  557 bits (1434), Expect = e-156,   Method: Composition-based stats.
 Identities = 260/615 (42%), Positives = 362/615 (58%), Gaps = 40/615 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSS 116
             +  +  +D + L  IRH+CAH++  AVQ+++PE +V IGP  E GFYYDFD+  PF+ 
Sbjct: 54  NQLTPLLDKDRQQLVKIRHTCAHVLGMAVQTLFPETKVTIGPWTETGFYYDFDRLTPFTP 113

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
           +++ +IE +M+ II  + P +++ +   + +       E YK+EILESIP  E++T Y  
Sbjct: 114 EDMKKIEGEMRRIIKANLPIIREVVDRAEIQTEIAELNEPYKLEILESIPETESITRYFI 173

Query: 177 G--------------------------EWFDLCRGPHVRSTGQVKK-FFKLMKVAGAYWR 209
           G                           W+DLC GPH+  TG++    F L  VAGAYW+
Sbjct: 174 GSPDGGRGNIPEQQPSLINPVLVPPDTCWWDLCAGPHLNFTGEIHPEAFALESVAGAYWQ 233

Query: 210 GDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFW 268
           GD ++P L RIYGTAW T ++L  YL   EE+++RDHRKL +++ LF I ED G G++FW
Sbjct: 234 GDESKPQLQRIYGTAWETPEQLQAYLTQKEEAQRRDHRKLGQQLKLFSIQEDAGGGLVFW 293

Query: 269 HRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
           H +G  +   +  Y R   ++D Y+ + TP V +  LW+ SGHWD YR NMF     +  
Sbjct: 294 HPRGAMMRYLIEDYWRNAHLEDGYQFLYTPHVANLDLWKTSGHWDFYRENMFEAMAVEH- 352

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
               +T+ +KPMNCP HV  +   L SYRE P++ AE G+VYR E SG LHGLMRVRGFT
Sbjct: 353 ----QTYQIKPMNCPFHVLTYKDDLHSYREFPLKWAELGTVYRYEKSGVLHGLMRVRGFT 408

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENI 447
           QDDAH+FC  EQ+ +E L + NL   I  DFGF    V LSTRPEK VGSD +W  A   
Sbjct: 409 QDDAHIFCLPEQIADEILGVLNLTEKILSDFGFTDYEVNLSTRPEKSVGSDQVWQLATEA 468

Query: 448 MKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFN 507
           +   L+        + N     G GAFYGPK +  +KDAIGR WQC TIQVDFNLP RF 
Sbjct: 469 LIKALN------NKQWNYLEDRGGGAFYGPKIDIKIKDAIGRLWQCSTIQVDFNLPERFG 522

Query: 508 AFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEY 567
             YV +   +  P+MIHRA+FGS+ERF GI+IEN+ G+ PLWL+PIQ  +  ++    +Y
Sbjct: 523 MEYVAADGSRQQPIMIHRAIFGSLERFFGILIENYAGDFPLWLAPIQLRLLPVSDEQQDY 582

Query: 568 AQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGST 627
           A+ +A  LK     +E D   E +  +IR   ++KIP++ I G +E   +++ IR     
Sbjct: 583 AKTVAIRLKKAGYRVEVDTSGERLGKQIRLSELEKIPVVAIVGKREVESQTLSIRTRQGG 642

Query: 628 TTQKVSLLDAIPILT 642
               +++ D      
Sbjct: 643 DLGTITVADLRERFK 657


>gi|332670551|ref|YP_004453559.1| threonyl-tRNA synthetase [Cellulomonas fimi ATCC 484]
 gi|332339589|gb|AEE46172.1| threonyl-tRNA synthetase [Cellulomonas fimi ATCC 484]
          Length = 670

 Score =  557 bits (1434), Expect = e-156,   Method: Composition-based stats.
 Identities = 241/640 (37%), Positives = 357/640 (55%), Gaps = 41/640 (6%)

Query: 36  KKAVAVAINGKVCDLSDPVREGSI-EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           +  +   ++G++ DL  P+ +G++ E +T +DP  LAV+RHS AH++A+AVQ + P+ ++
Sbjct: 30  RDVIVARVDGELRDLHLPLPDGAVVEGVTVQDPEGLAVLRHSAAHVLAQAVQEVNPKAKL 89

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            IGP I DGFYYDFD + PF+ D+L  IEK M  I+     F +  ++ E+ARE  E + 
Sbjct: 90  GIGPPITDGFYYDFDVDTPFTPDDLRAIEKVMGRIVKEGQTFRRWDVTEEQARE--ELRD 147

Query: 155 EAYKVEIL----ESIPAKENVTLYRQGE------------------WFDLCRGPHVRSTG 192
           E YK+E++    +   A         G                   W DLCRGPHV ST 
Sbjct: 148 EPYKLELIGLKGDPAAADGASVEVGLGGLSIYQNVRGAGRESEQVVWQDLCRGPHVPSTK 207

Query: 193 QVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLARE 252
            +   F+L + A AYWRG    P L R+YGTAW ++ EL  YL  + E+E+RDHR+L  E
Sbjct: 208 VLGNGFQLTRSAAAYWRGSEKNPQLQRVYGTAWPSKDELKAYLERVAEAERRDHRRLGSE 267

Query: 253 MDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGH 310
           +DLF   ++ GSG+  +H KG  I   + +Y R R ++  Y  +NTP +  + L+Q SGH
Sbjct: 268 LDLFSFPDEIGSGLAVFHPKGGLIRMEMEAYSRKRHVEAGYSFVNTPHITKERLFQLSGH 327

Query: 311 WDSYRANMFAVKCADDTIKD-------LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
            D Y   M+     D+ + D        + + LKPMNCP H  V+    +SYRELP+RL 
Sbjct: 328 LDWYADGMYPPMHLDEELDDEGNVKRQGQNYYLKPMNCPMHNLVYRSRGRSYRELPLRLF 387

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFG+VYR E SG +HG+ R RGFTQDDAH++CT +QM +E  ++   ++ + KD+G +  
Sbjct: 388 EFGTVYRYEKSGVVHGMTRARGFTQDDAHIYCTLDQMKDELTRLLTFVLDLLKDYGLDDF 447

Query: 424 MVKLS-TRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
            ++LS   PEK VG D +W+ A   ++ V  +        +      G  AFYGPK    
Sbjct: 448 YLELSTKNPEKFVGDDDVWERATETLREVAQSSG------LELVPDPGGAAFYGPKISVQ 501

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
            KDAIGR WQ  TIQ+DFNLP  F   Y      +  PVMIHRA+FGSIERF  ++ E++
Sbjct: 502 AKDAIGRTWQMSTIQLDFNLPELFELEYTAPDGSRQRPVMIHRALFGSIERFFAVLTEHY 561

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P+Q +   +      Y +++   L++  +  E D  ++    KIR  S +K
Sbjct: 562 AGAFPAWLAPVQVLAVPVAEPFEPYLEDVVAQLRAEGIRAEIDRSDDRFGKKIRNASTQK 621

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           IP ++I G ++A   ++  R         V + +A+  + 
Sbjct: 622 IPFVLIVGGEDADAGAVSFRYRDGRQDNGVPVAEAVQRIV 661


>gi|296170866|ref|ZP_06852424.1| threonine--tRNA ligase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295894491|gb|EFG74233.1| threonine--tRNA ligase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 677

 Score =  557 bits (1434), Expect = e-156,   Method: Composition-based stats.
 Identities = 247/658 (37%), Positives = 365/658 (55%), Gaps = 40/658 (6%)

Query: 17  FPVHATGSDV---AESISRSLAKKAVAVA-INGKVCDLSD-PVREGSIEIITPEDPRSLA 71
            P   T +     A    R      V V   +GK+ DLS  P  +  +  +  +     +
Sbjct: 8   VPAGTTAAAAVREAGLPGRGAPDAIVVVRDADGKLRDLSWVPEADAEVVPVAADTDEGRS 67

Query: 72  VIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIA 131
           VIRHS AH++A+AVQ ++P+ ++ IGP I DGFYYDFD  +PF+ ++LA +EK+M++I+ 
Sbjct: 68  VIRHSAAHVLAQAVQGLFPDAKLGIGPPITDGFYYDFDVAEPFTPEDLAALEKRMRQIVK 127

Query: 132 RDSPFLKQYL-SHEKARELFESKKEAYKVEILESIPAKENVTLY---------------R 175
               F ++   S ++AR   E   E YK+E+++      ++                  R
Sbjct: 128 EGQLFERRVYESKDQARA--ELAGEPYKLELVDDKSGDPDIMEVGGDELTAYDNLNPRSR 185

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
           +  W DLCRGPH+ +T  +  F KL + + AYWRGD     L RIYGTAW +Q+ L ++L
Sbjct: 186 ERVWGDLCRGPHIPTTRHIPAF-KLTRSSAAYWRGDQKNASLQRIYGTAWESQEALDRHL 244

Query: 236 YFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEE 293
             LEE+++RDHRKL  E+DLF   ++ GSG+  +H KG  + + L  Y RRK  +  YE 
Sbjct: 245 ELLEEAQRRDHRKLGTELDLFSFPDEIGSGLAVFHPKGGVVRRELEEYSRRKHIEAGYEF 304

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD-------LRTFALKPMNCPGHVA 346
           +NTP +    L+  SGH D Y   MF     D  I D        + + LKPMNCP H  
Sbjct: 305 VNTPHITKAQLFHTSGHLDWYAEGMFPPMHLDAEIGDDGTVRKPGQDYYLKPMNCPMHTL 364

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           +F    +SYRELP+RL EFG+VYR E SG +HGL R RGFT DD+H+FCT+EQ+  E   
Sbjct: 365 IFRSRGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTMDDSHIFCTREQLHGELAS 424

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
           +   ++ +  D+G E   ++LST+  +  VG+D +W+ A N +  V      +++  +  
Sbjct: 425 LLRFVLELLGDYGLEDFYLELSTKDPEKFVGTDEMWEQATNSLAEV------AAESGLEL 478

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
               G  AFYGPK     +DA+GR WQ  TIQVDFN P RF   Y      +  PVMIHR
Sbjct: 479 VPDPGGAAFYGPKISVQARDALGRSWQMSTIQVDFNFPERFELEYTAPDGTRQRPVMIHR 538

Query: 526 AVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD 585
           A+FGSIERF GI+ E++ G  P WL+P+Q +   +    V Y + +A  LKSH + +E D
Sbjct: 539 ALFGSIERFFGILTEHYAGAFPAWLAPVQVVGIPVADEHVPYLESVAAQLKSHGVRVEVD 598

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             ++ +  KI  H+ +K+P +++ GD++   +++  R    T    V    A+  + K
Sbjct: 599 ASDDRMAKKIVHHTGQKVPFMLLAGDRDVQAKAVSFRFGDRTQINGVPRDSAVDAIVK 656


>gi|256788869|ref|ZP_05527300.1| threonyl-tRNA synthetase [Streptomyces lividans TK24]
          Length = 653

 Score =  557 bits (1434), Expect = e-156,   Method: Composition-based stats.
 Identities = 258/654 (39%), Positives = 376/654 (57%), Gaps = 38/654 (5%)

Query: 13  SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLA 71
           S +   V  TG+  AE  +    +  +A  ++G + DL+  V++G ++E +       L 
Sbjct: 7   SEREERVVTTGTTAAELFAGE--RSIIAARVSGDLKDLAYEVKDGETVEAVEISSEDGLD 64

Query: 72  VIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIA 131
           ++RHS AH+MA+AVQ ++PE ++ IGP ++DGFYYDFD E+PF  D+L  IEKKMQEI  
Sbjct: 65  ILRHSTAHVMAQAVQELFPEAKLGIGPPVKDGFYYDFDVEKPFHPDDLKAIEKKMQEIQK 124

Query: 132 RDSPFLKQYLSHEKARELFESKKEAYKVEIL------------ESIPAKENVTLYRQGE- 178
           R   F ++ ++ E ARE  E   E YK+E++            +       +T+Y   + 
Sbjct: 125 RGQRFSRRVVTDEAARE--ELADEPYKLELIGLKGSASSDDGADVEVGAGELTIYDNLDA 182

Query: 179 ------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELT 232
                 W DLCRGPH+ +T  +  F KLM+ A AYWRG    PML RIYGTAW T+ EL 
Sbjct: 183 KTGELCWKDLCRGPHLPTTRNIPAF-KLMRNAAAYWRGSEKNPMLQRIYGTAWPTKDELK 241

Query: 233 QYLYFLEESEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYMRR-KIKDD 290
            +L FL E+EKRDHRKL  E+DLF I  + GSG+  +H KG  I + +  Y RR   ++ 
Sbjct: 242 AHLEFLAEAEKRDHRKLGSELDLFSIPEQIGSGLAVFHPKGGIIRRVMEDYSRRRHEEEG 301

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH 350
           YE + TP      L++ SGH D Y   M+     D    +   + LKPMNCP H  +F+ 
Sbjct: 302 YEFVYTPHATKGKLFETSGHLDWYADGMYPPMQLD----EGVDYYLKPMNCPMHNLIFDA 357

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
             +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDDAH++CT+EQM  E  K    
Sbjct: 358 RGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYCTREQMSEELDKTLTF 417

Query: 411 IISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL 469
           ++++ +D+G     ++LST+  +  VGSD  W++A   ++ V +      +  +      
Sbjct: 418 VLNLLRDYGLNDFYLELSTKDPEKFVGSDEAWEEATETLRQVAE------KQNLELVADP 471

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG 529
           G  AFYGPK     +DAIGR WQ  TIQ+DFNLP RF+  Y  +   K  PVMIHRA+FG
Sbjct: 472 GGAAFYGPKISVQARDAIGRTWQMSTIQLDFNLPERFSLEYTAADGAKTRPVMIHRALFG 531

Query: 530 SIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE 589
           SIERF  +++E++ G +P WL+P+QA+   +  + V+Y +E A   +   L ++ D  ++
Sbjct: 532 SIERFFAVLLEHYAGAMPPWLAPVQAVGIPVGDAHVQYLEEFAAEARRKGLRVDVDASSD 591

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +  KIR    +K+P +II GD++    ++  R    +    +    A+  L  
Sbjct: 592 RMQKKIRTQQKQKVPFMIIVGDEDMHGGTVSFRYRDGSQENGIPRDQALAKLVD 645


>gi|325188237|emb|CCA22777.1| unnamed protein product [Albugo laibachii Nc14]
          Length = 756

 Score =  557 bits (1434), Expect = e-156,   Method: Composition-based stats.
 Identities = 224/688 (32%), Positives = 347/688 (50%), Gaps = 64/688 (9%)

Query: 4   DIKLTFPDGSIKN--FPVHATGSDVAESISRSLAKKAVAVAI------------------ 43
            IK+  P+ +I       H T  D+   I        V   +                  
Sbjct: 75  PIKIILPNENITESGEAYHITPLDIIRRIDSISPNDIVVAKVRYHNAKDQSEDPLSIDTS 134

Query: 44  -----------------NG-------KVCDLSD-PVREGSIEIITPEDPRSLAVIRHSCA 78
                            NG       ++ DL    + +  ++ +  ++     V  HS A
Sbjct: 135 ANIDGNESSPDCCASHANGQSPVSSWELWDLKRALIGDCDLKFVKFDEEDGRMVFWHSSA 194

Query: 79  HIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQIEKKMQEIIARDSPFL 137
           HI+ EA++ +     + IGP +E GFYYD F     +   E + +EK  Q+I+  +  F 
Sbjct: 195 HILGEAMEQL-KGCFLTIGPPVEGGFYYDAFMGNIAWQESEWSVLEKTCQKIVKENQNFE 253

Query: 138 KQYLSHEKARELFESKKEAYKVEILE-SIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKK 196
           +  L+ E+A EL       +K +++   IP     T YR G   DLCRGPHV STG+VK 
Sbjct: 254 RLVLTREEALEL--FADNVFKTQLIATKIPEGGKTTAYRCGSLIDLCRGPHVPSTGRVK- 310

Query: 197 FFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLF 256
              + K +  YW G +    L R+YG ++ ++ +L ++ +F  E+ KRDHR+L    DL+
Sbjct: 311 ALAITKTSSTYWLGKTTNDSLQRVYGVSFPSKAQLKEWKHFQAEATKRDHRRLGLSQDLY 370

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
                  G  FW   G  IF  L+ ++R + ++  Y E+ TP + +  LW  SGH   Y+
Sbjct: 371 FFHSLSPGSAFWLPNGAHIFSKLLEFLRAQYRERGYNEVITPNMFNMELWNTSGHAAHYK 430

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            NMF  +       + + FALKPMNCP H  +F+H L+SYRELP+R A+FG ++RNE SG
Sbjct: 431 ENMFVFEV------ESQEFALKPMNCPSHCLMFDHRLRSYRELPIRYADFGVLHRNELSG 484

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
           +L GL RVR F QDDAH+FC ++Q+  E +     +  +Y  F     + +LSTRP K +
Sbjct: 485 ALTGLTRVRRFQQDDAHIFCREDQIKKEIIDFLQFMKFVYDTFDIRFQL-ELSTRPAKAM 543

Query: 436 GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGT 495
           G    W+ AE  +   LD     +Q R       G+GAFYGPK + ++ DA+ R  QC T
Sbjct: 544 GELEQWNRAEAQLASALDEFIGKNQWR----ENPGDGAFYGPKIDIMITDALNRQHQCAT 599

Query: 496 IQVDFNLPSRFNAFYVNSHSEK-CHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQ 554
           +Q+DF LP RFN  Y +   E    P++IHRA++GS+ERFI +++E++    P WLSP Q
Sbjct: 600 VQLDFQLPIRFNLKYRSDDEEGFKRPIIIHRAIYGSLERFIAVLVEHYAAKFPFWLSPRQ 659

Query: 555 AIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
            ++ T+ ++ VEY  ++   +      +E +   +T+N KIRE  +     I++ G KE 
Sbjct: 660 ILIVTVGAAFVEYGYQVKEAIFRAGFQVEIEDSGKTLNKKIREGQLAHYNFILVVGAKEQ 719

Query: 615 SERSIGIRRFGSTTTQKVSLLDAIPILT 642
             +S+ IR   +      ++ +AI +  
Sbjct: 720 ETQSVNIRTRDNKVHGTKTIQEAIDMFQ 747


>gi|67475342|ref|XP_653365.1| threonyl-tRNA synthetase [Entamoeba histolytica HM-1:IMSS]
 gi|56470308|gb|EAL47979.1| threonyl-tRNA synthetase, putative [Entamoeba histolytica
           HM-1:IMSS]
          Length = 676

 Score =  557 bits (1434), Expect = e-156,   Method: Composition-based stats.
 Identities = 208/647 (32%), Positives = 345/647 (53%), Gaps = 24/647 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESI--SRSLAKK--AVAVAINGKVCDLSDPVREGS-I 59
           I + + D + +      +  +  + +     + K+       +NGK+ DL+ P  E S +
Sbjct: 40  ITIKYKDMTFQGKSFVTSPQEFIKDLVEKGEITKENPVFVAKVNGKLWDLTRPFEEDSTV 99

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           E +  ++  +  V  HS AH++ EA+++ + +  +  GP     F+YD       S+ + 
Sbjct: 100 EYLGFDNQEAHDVFWHSSAHLLGEAMETQY-KCYLHTGPATAIDFFYDCKMNGAISAADF 158

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +++  ++  +     F +  ++ E+A ++       YKV+I+E +P    +T Y+ G +
Sbjct: 159 KKLQSLIEGYVREHQVFTRIEITKEEALKM--FAYNPYKVKIIEKLPEGSTITAYKNGSF 216

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPH+ +   +K   K++     +  G +   +L RI+  ++ T+  L +Y+   E
Sbjct: 217 VDLCRGPHLANAASIK-AIKILSSGSVHLDGTATGDLLQRIHAVSFPTKDLLKEYIKRAE 275

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E++KRDHR + R+ DLF       G  FW   G +I+  L+  MR + +   Y+E+ TP 
Sbjct: 276 EADKRDHRLIGRQQDLFFFHVLSPGSCFWLPHGTRIYNKLVELMRSEYRVLGYQEVITPN 335

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW+ SGHW  Y+ +MF+ +C      + +TFALKPMNCPGH  +F    +SYREL
Sbjct: 336 IFLSTLWETSGHWQHYKDDMFSFEC------EKQTFALKPMNCPGHCVMFASKKRSYREL 389

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R AEFG ++RNE +G+LHGL RVR F QDD+H+FCT +Q+ +E   + NL+  IYK F
Sbjct: 390 PLRYAEFGVLHRNELTGALHGLTRVRRFVQDDSHIFCTMDQIESEVTGVLNLMKKIYKIF 449

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+  +   +   +K +G    W+ AE ++  VL+         +   +  G+GAFYGPK
Sbjct: 450 GFKTEIALSTRNEKKFMGEIETWNKAEAMLTQVLND------SHLPFVINAGDGAFYGPK 503

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK--CHPVMIHRAVFGSIERFIG 536
            +  ++DA+GR  Q  T+Q+DF LP RF   Y++    +    PVM+HRAV GSIERF  
Sbjct: 504 IDIRIEDALGRKHQVATVQLDFQLPLRFKLDYMSEDPNQPLKTPVMVHRAVLGSIERFTA 563

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           I+ E+  G  P WLSP Q +V T++    EY  ++   L       + D  +  +  KIR
Sbjct: 564 ILTEHLAGKWPFWLSPRQVMVCTVSEKYNEYGAKVTKELNDAGFYADLDDSDNKLPKKIR 623

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              + +   I++ G++E    S+ +R   +    KV   + I  L +
Sbjct: 624 NAQVAQYNFILVIGEEELVSNSVNVRTRENKVEGKVEFKEFIKHLKQ 670


>gi|218438366|ref|YP_002376695.1| threonyl-tRNA synthetase [Cyanothece sp. PCC 7424]
 gi|218171094|gb|ACK69827.1| threonyl-tRNA synthetase [Cyanothece sp. PCC 7424]
          Length = 608

 Score =  557 bits (1434), Expect = e-156,   Method: Composition-based stats.
 Identities = 244/593 (41%), Positives = 366/593 (61%), Gaps = 16/593 (2%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           I++    +  +L  IRH+ +HIMA AVQ ++P+ QV IGP  E+GFYYDFD  +PF+ ++
Sbjct: 16  IKLPKTSESETLKKIRHTTSHIMAMAVQQLFPKAQVTIGPWTENGFYYDFDTPEPFTEED 75

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L  I+K+M +II R  P +++ ++ E+A    ++  E YK+EILE I  +E +T+Y  G+
Sbjct: 76  LKAIKKEMVKIIKRKLPVIREEVTREEAERRIQAINEPYKLEILEGI--QEPITIYHLGD 133

Query: 179 -WFDLCRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
            W+DLC GPHV +T ++  K   L  VAGAYWRGD  +  L RIYGTAW T ++L +Y  
Sbjct: 134 KWWDLCAGPHVETTAEIDPKAIDLENVAGAYWRGDETKAQLQRIYGTAWETPEQLAEYKR 193

Query: 237 FLEESEKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEI 294
             EE+ KRDHR+L RE+ LF  ++  G G+  W  KG  I  TL  +++  +IK  Y  +
Sbjct: 194 RKEEALKRDHRRLGRELGLFIFSDAVGPGLPLWTPKGAIIRSTLEDFLKKEQIKRGYLPV 253

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCAD-DTIKDLRTFALKPMNCPGHVAVFNHGLK 353
            TP +    L++ SGHW +Y+ +MF +   D ++  +   F LKPMNCP H+ ++   L+
Sbjct: 254 VTPHIARIDLFKISGHWQNYKEDMFPMMAEDQESALNEMGFVLKPMNCPFHIQIYKSELR 313

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYR+LP+RLAEFG+VYR E SG L GL RVRGFT DD+H+F T EQ+  E L + +LI+S
Sbjct: 314 SYRDLPMRLAEFGTVYRYEQSGELGGLTRVRGFTVDDSHLFVTPEQLEEEFLSVVDLILS 373

Query: 414 IYKDFGFEKIMVKLSTRPE---KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
           ++     +    +LS R     K +G D +W+ AEN ++  +  +       +      G
Sbjct: 374 VFNSLQLKNFKARLSFRDPASDKYIGGDDVWNKAENAIRSAVQKLN------MEHFEAPG 427

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           E AFYGPK ++I KDA+ R+WQ GT+QVD+NLP RF+  YV     +  PVMIHRA FGS
Sbjct: 428 EAAFYGPKLDFIFKDALEREWQLGTVQVDYNLPERFDLEYVAEDGTRKRPVMIHRAPFGS 487

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
           +ER +GI+IE + G+ PLWL+PIQ  +  ++   ++YA+++A  ++S  +  E D   E 
Sbjct: 488 LERLVGILIEEYAGDFPLWLAPIQVRLLPVSDPQLDYAKQVAAQMRSQGIRAEADTSGER 547

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +   IR    +KIP++ + G KE    ++ IR   S     +++ + I  +T+
Sbjct: 548 LGKMIRNAEKQKIPVMGVVGAKEVESNTLSIRTRASGELGTMAVNEVIEKVTE 600


>gi|148909063|gb|ABR17634.1| unknown [Picea sitchensis]
          Length = 682

 Score =  557 bits (1434), Expect = e-156,   Method: Composition-based stats.
 Identities = 261/591 (44%), Positives = 378/591 (63%), Gaps = 18/591 (3%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           I + T E  ++L  IRH+ AH++A AVQ ++P+ +V IGP IE GFYYDFD  QP +  +
Sbjct: 100 IVLPTNETSKTLLCIRHTSAHVLAMAVQKVFPDAKVTIGPWIERGFYYDFDI-QPLTDKD 158

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L +I+K+M  II R+ P +++ +S E+A     +  E YK+EIL+SI + E +T+Y  G+
Sbjct: 159 LKKIKKEMDRIIRRNLPLIREEVSREEAERRIRAINEPYKLEILDSIKS-EPITIYHIGD 217

Query: 179 -WFDLCRGPHVRSTGQ-VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
            W+DLC GPHV STG   KK  +L  VAGAYWRGD  R ML RIYGTAW  +++L  Y +
Sbjct: 218 EWWDLCAGPHVESTGLLNKKAIELESVAGAYWRGDEKRQMLQRIYGTAWENEEQLKTYQF 277

Query: 237 FLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEI 294
             EE+++RDHR+L +E+DLF I E+ G G++FWH +G  I Q +  + +R  I+  YE +
Sbjct: 278 LKEEAKRRDHRRLGQELDLFSIQEEAGGGLVFWHPRGAIIRQNIEDFWKRTHIQHGYELL 337

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
            TP V    LW+ SGH + Y+ NMF     +D +     + L+PMNCP H+ V+ H L+S
Sbjct: 338 YTPHVDKADLWKISGHLEFYKENMFNQMDIEDEL-----YQLRPMNCPYHILVYKHSLRS 392

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YR+LP ++AE G+VYR E SGSLHGL RVRGFTQDDAH+FC   Q+ +E   + +L  +I
Sbjct: 393 YRDLPFKVAELGTVYRYEMSGSLHGLFRVRGFTQDDAHIFCLPSQIKDEIRGVLDLTEAI 452

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
              F F+   + LST+PEK VGSD +W+ A + +K  L+          +  V  G GAF
Sbjct: 453 LSQFDFKNYEINLSTKPEKAVGSDVIWEKATSALKDALED------KGWDYSVDEGGGAF 506

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  ++DA+GR WQC T+QVDFNLP RF+ FY++S+SEK  P+MIHRA+ GS+ERF
Sbjct: 507 YGPKIDLKIEDALGRKWQCSTVQVDFNLPQRFDLFYIDSNSEKKRPIMIHRAILGSLERF 566

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
            GI+IEN+ G+ PLWLSP+QA +  +T + V Y Q++   +K   +  E  +  E ++  
Sbjct: 567 FGILIENYAGDFPLWLSPVQARILPVTDTQVPYCQKVVAKMKEKDIRAELSY-GERLSKL 625

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           IR     KIP++ + G +E    ++ +R         +++ + I  + K +
Sbjct: 626 IRNSETHKIPLMAVVGPREVESGTLTVRTRHGGELGTMTIDEVIEKIKKAA 676


>gi|294948976|ref|XP_002785990.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
 gi|239900098|gb|EER17786.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
          Length = 836

 Score =  556 bits (1433), Expect = e-156,   Method: Composition-based stats.
 Identities = 236/747 (31%), Positives = 368/747 (49%), Gaps = 119/747 (15%)

Query: 1   MPSD-IKLTFPDGSIKNFPV-HATGSDVAESISRSLAKKAVAVAI--------------- 43
           +P D I +  PDG+ K       T  D+A  IS+ LA   VA  +               
Sbjct: 58  LPKDPITIILPDGTEKEGHKFETTPLDIALGISKGLANSVVAAKVLYTEPVDSMDQVVAA 117

Query: 44  NGK-----------------------------VCDLSDPVR-EGSIEIITPEDPRSLAVI 73
           + +                             V DLS P+     +E++  + P      
Sbjct: 118 DDESDVGSDAGDDDEEEDGVQANMVKAWQKETVWDLSRPLEGSCKLELLKFDSPEGKDTF 177

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQIEKKMQEIIAR 132
            HS AHI+ EA++  +    + IGP +E+GFYYD F        ++  +IEK++  I+  
Sbjct: 178 WHSSAHILGEALEQEY-GCYLTIGPPLENGFYYDGFYGNHKLGPNDYEKIEKRIASIVKE 236

Query: 133 DSPFLKQYLSHEKARELFESKKEAYKVEILE-SIPAKENVTLYRQGEWFDLCRGPHVRST 191
           D  F +  ++ E+A EL       +K++++   +P     ++YR G   DLCRGPH+  T
Sbjct: 237 DQKFQRLVVTKEEALEL--FAYNPFKLQLISTKVPDGSLTSVYRIGSLVDLCRGPHLPRT 294

Query: 192 GQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAR 251
           G  K F+   K + AYW G +    L R+Y  ++ T++ L +Y   +EE+ KRDHR + +
Sbjct: 295 GVAKAFWVN-KNSQAYWLGKAENDSLQRVYAISFPTEKMLKEYKKNVEEAMKRDHRLIGK 353

Query: 252 EMDLFHIAEDGSG-VIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSG 309
           + DLF      S    FW   G  I+  L+ ++RR+ +   ++E+ TP +  + L+QQSG
Sbjct: 354 KQDLFFFHPTMSPGSCFWTSHGAVIYNKLVDFIRREYRLRGFDEVITPNIFSEALFQQSG 413

Query: 310 HWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVY 369
           H  +Y+ NM+++    +T      + LKPMNCPGH  +F+  ++SY+ELP+R+A+FG ++
Sbjct: 414 HCGNYKDNMYSMNIEGET------WYLKPMNCPGHCMIFDQKVRSYKELPIRMADFGVLH 467

Query: 370 RNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
           RNE SG+L GL RVR F QDDAH+FC  +Q+ +E       +  +Y  FGF+  +  LST
Sbjct: 468 RNELSGTLSGLTRVRRFQQDDAHIFCRPDQVQDEITHALEFLKFVYNTFGFDFSVC-LST 526

Query: 430 RPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGR 489
           RP+K +GS A+WD AEN +K  L+         I+  +  G+GAFYGPK +  L+DA+ R
Sbjct: 527 RPKKAIGSRAIWDTAENGLKNALEACG------IDYDLNPGDGAFYGPKIDIRLRDALNR 580

Query: 490 DWQCGTIQVDFNLPSRFNAFYVNSHSEK-------------------------------- 517
             QCGTIQ+DFNLP RFN  Y  + +E+                                
Sbjct: 581 YHQCGTIQLDFNLPIRFNLQYRTAETEESGDVHSVSEAANSPADDHQEKAGQNSAAVENV 640

Query: 518 ------------------CHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTT 559
                               PVM+HRA+ GSIER   I+ E++ G  P WLSP Q +V  
Sbjct: 641 GSKAKADEITLGELKHGFERPVMVHRAILGSIERCTAILTEHYGGKWPFWLSPRQVMVVP 700

Query: 560 ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSI 619
           ++    +YA  +   L       + D    T+N K+RE  +     I + G+KE ++ ++
Sbjct: 701 VSDKYSDYADYLRKQLVRLGYEADADLSTRTMNKKVREAQVAAYNYIAVVGEKEQNDLTV 760

Query: 620 GIRRFGS-TTTQKVSLLDAIPILTKES 645
            +R+  S        + + + +  KES
Sbjct: 761 TLRKRDSVRPLGTFGIAEMLDMFEKES 787


>gi|159028099|emb|CAO87176.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 618

 Score =  556 bits (1432), Expect = e-156,   Method: Composition-based stats.
 Identities = 262/618 (42%), Positives = 364/618 (58%), Gaps = 40/618 (6%)

Query: 51  SDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK 110
             P+ E     +  +D + L  IRH+CAHI+A AVQ+++PE +VAIGP  E GFYYDFD+
Sbjct: 6   RHPLTES---PVIEDDSQKLLKIRHTCAHILAMAVQTLFPETKVAIGPWTETGFYYDFDR 62

Query: 111 EQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN 170
           + PF+ ++L +I  +M  II ++ P +++ L   +     E   + YK  ILE IP  E 
Sbjct: 63  QTPFTPEDLEKIAAEMGRIIGKNLPIIREVLERSEITAEIERLNQPYKKLILERIPPDET 122

Query: 171 VTLYRQGE-----------------------WFDLCRGPHVRSTGQVKK-FFKLMKVAGA 206
           +T Y  G                        W+DLC GPH+ STG++    F L  VAGA
Sbjct: 123 ITRYFIGSPDAGRSDREPSLIDGAVSPPEEFWWDLCAGPHLNSTGEINPNAFVLESVAGA 182

Query: 207 YWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGV 265
           YW+GD  +P L RIYGTAW T  EL  YL   EE+++RDHRKL +++ LF I ED G G+
Sbjct: 183 YWQGDEKQPQLQRIYGTAWQTPAELQNYLQQKEEAQRRDHRKLGQKLKLFSIQEDAGGGL 242

Query: 266 IFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCA 324
           +FWH +G  +   +  Y R+  ++  Y+ + TP + +  LW+ SGHWD YR NMF     
Sbjct: 243 VFWHPRGATMRYLIEDYWRQAHLEAGYQFLYTPHLANLDLWKTSGHWDFYRDNMFEAIEL 302

Query: 325 DDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVR 384
                + +++ +KPMNCP HV  + + L SYRE P+R AE G+VYR E SG LHGLMRVR
Sbjct: 303 -----EQQSYQIKPMNCPFHVLTYQNDLHSYREFPLRWAELGTVYRYERSGVLHGLMRVR 357

Query: 385 GFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
           GFTQDDAH+FC  EQ+  E L + NL   I  DFGF    + LSTRP K VGSD++W+ A
Sbjct: 358 GFTQDDAHIFCLPEQIAAEILGVLNLTEKILSDFGFTNYQINLSTRPSKSVGSDSVWELA 417

Query: 445 ENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPS 504
              +   L+        + +     G GAFYGPK +  ++DAIGR WQC TIQVDFNLP 
Sbjct: 418 TAALIEALNA------KKWDYIEDQGGGAFYGPKIDIKIQDAIGRMWQCSTIQVDFNLPE 471

Query: 505 RFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA 564
           RF+  YV     +  P+MIHRA+FGS+ERF GI+IEN+ G+ PLWL+PIQ  +  ++   
Sbjct: 472 RFDMQYVARDGSRERPIMIHRAIFGSLERFFGILIENYAGDFPLWLAPIQVRLLPVSDEQ 531

Query: 565 VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRF 624
             YA E+A  LK     +E D   E +  +IR   ++KIP++ + G +E S +++ IR  
Sbjct: 532 QHYALEVAVQLKQAGYRVEIDKSGERLGKQIRTGELEKIPVLAVIGKREVSSKTLSIRTR 591

Query: 625 GSTTTQKVSLLDAIPILT 642
                  ++L D +  + 
Sbjct: 592 QGGDLGSMTLADLLEKMQ 609


>gi|254819890|ref|ZP_05224891.1| threonyl-tRNA synthetase [Mycobacterium intracellulare ATCC 13950]
          Length = 691

 Score =  556 bits (1432), Expect = e-156,   Method: Composition-based stats.
 Identities = 248/668 (37%), Positives = 368/668 (55%), Gaps = 44/668 (6%)

Query: 11  DGSIKN----FPVHATGSDVAESIS---RSLAKKAVAVA-INGKVCDLSD-PVREGSIEI 61
           DGS        P   T +          R      V V    GK+ DLS  P  +  +  
Sbjct: 12  DGSDPQAPIRVPAGTTAAAAVRDAGLPGRGAPDGVVVVRDAEGKLRDLSWAPAADAEVIP 71

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +        +VIRHS AH++A+AVQ ++P+ ++ IGP I DGFYYDFD  +PF+ ++LA 
Sbjct: 72  VAANTDDGRSVIRHSAAHVLAQAVQELFPQAKLGIGPPITDGFYYDFDVPEPFTPEDLAA 131

Query: 122 IEKKMQEIIARDSPFLKQYL-SHEKARELFESKKEAYKVEILESIPAK--------ENVT 172
           +EK+M++I+     F ++   S ++AR   E   E YK+E+++             + +T
Sbjct: 132 LEKRMRQIVKEGQLFERRVYESKDQARA--ELAGEPYKLELVDDKSGDPSVMEVGGDELT 189

Query: 173 LY-------RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAW 225
            Y       R+  W DLCRGPH+ +T  +  F KL + + AYWRGD N   L RIYGTAW
Sbjct: 190 AYDNLNPRTRERVWGDLCRGPHIPTTRHIPAF-KLTRSSAAYWRGDQNNASLQRIYGTAW 248

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR 284
            +Q+ L ++L  +EE+++RDHRKL  E+DLF   ++ GSG+  +H KG  + + L  Y R
Sbjct: 249 ESQEALERHLTLIEEAQRRDHRKLGTELDLFSFPDEIGSGLAVFHPKGGIVRRELEEYSR 308

Query: 285 RKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD-------LRTFAL 336
           RK     YE +NTP +    L+  SGH D Y   M+     D    D        + + L
Sbjct: 309 RKHIAAGYEFVNTPHITKADLFHTSGHLDWYAEGMYPPMHLDAEYDDDGTVRKPGQDYYL 368

Query: 337 KPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT 396
           KPMNCP H  +F    +SYRELP+RL EFG+VYR E SG +HGL R RGFT DDAH+FC 
Sbjct: 369 KPMNCPMHTLIFRSRGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTMDDAHIFCA 428

Query: 397 KEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDTI 455
           +EQ+  E   +   I+ +  D+G E   ++LST+  +  VGSDA+W+++   +  V    
Sbjct: 429 REQLHAELASLLRFILELLGDYGLEDFYLELSTKDPEKFVGSDAMWEESTKALADV---- 484

Query: 456 KNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS 515
             +++  +      G  AFYGPK     +DA+GR WQ  TIQVDFN P RF   Y  +  
Sbjct: 485 --AAESGLQLVPDPGGAAFYGPKISVQARDALGRSWQMSTIQVDFNFPERFELEYTAADG 542

Query: 516 EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLL 575
            +  PVMIHRA+FGSIERF GI+ E++ G  P WL+P+Q +   +    V+Y  ++A  L
Sbjct: 543 SRQRPVMIHRALFGSIERFFGILTEHYAGAFPAWLAPVQVVGIPVADDHVDYLNDVAAQL 602

Query: 576 KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
           +SH + +E D  ++ +  KI  H+ +++P +++ GD++ +  ++  R    T    V   
Sbjct: 603 RSHGVRVEVDASDDRMAKKIVNHTNQRVPFMLLAGDRDVAAGAVSFRFGDRTQINGVPRD 662

Query: 636 DAIPILTK 643
            A+  + K
Sbjct: 663 GAVDAIVK 670


>gi|294901580|ref|XP_002777422.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
 gi|239885058|gb|EER09238.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
          Length = 836

 Score =  556 bits (1432), Expect = e-156,   Method: Composition-based stats.
 Identities = 236/747 (31%), Positives = 369/747 (49%), Gaps = 119/747 (15%)

Query: 1   MPSD-IKLTFPDGSIKNFPV-HATGSDVAESISRSLAKKAVAVAI--------------- 43
           +P D I +  PDG+ K       T  D+A  IS+ LA   VA  +               
Sbjct: 58  LPKDPITIILPDGTEKEGHKFETTPLDIALGISKGLANSVVAAKVLYTEPVDSMDQVVAA 117

Query: 44  NGK-----------------------------VCDLSDPVR-EGSIEIITPEDPRSLAVI 73
           + +                             V DLS P+     +E++  + P      
Sbjct: 118 DDESDVGSDAGDDDEEEDGVQANMVKAWQKETVWDLSRPLEGSCKLELLKFDSPEGKDTF 177

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQIEKKMQEIIAR 132
            HS AHI+ EA++  +    + IGP +E+GFYYD F        ++  +IEK++  I+  
Sbjct: 178 WHSSAHILGEALEQEY-GCYLTIGPPLENGFYYDGFYGNHKLGPNDYEKIEKRIASIVKE 236

Query: 133 DSPFLKQYLSHEKARELFESKKEAYKVEILE-SIPAKENVTLYRQGEWFDLCRGPHVRST 191
           D  F +  ++ E+A ELF      +K++++   +P     ++YR G   DLCRGPH+  T
Sbjct: 237 DQKFQRLVVTKEEALELFAY--NPFKLQLISTKVPDGSLTSVYRIGSLVDLCRGPHLPRT 294

Query: 192 GQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAR 251
           G  K F+   K + AYW G +    L R+Y  ++ T++ L +Y   +EE+ KRDHR + +
Sbjct: 295 GVAKAFWVN-KNSQAYWLGKAENDSLQRVYAISFPTEKMLKEYKKNVEEAMKRDHRLIGK 353

Query: 252 EMDLFHIAEDGSG-VIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSG 309
           + DLF      S    FW   G  I+  L+ ++RR+ +   ++E+ TP +  + L+QQSG
Sbjct: 354 KQDLFFFHPTMSPGSCFWTSHGAVIYNKLVDFIRREYRLRGFDEVITPNIFSEALFQQSG 413

Query: 310 HWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVY 369
           H  +Y+ NM+++    +T      + LKPMNCPGH  +F+  ++SY+ELP+R+A+FG ++
Sbjct: 414 HCGNYKDNMYSMNIEGET------WYLKPMNCPGHCMIFDQKVRSYKELPIRMADFGVLH 467

Query: 370 RNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
           RNE SG+L GL RVR F QDDAH+FC  +Q+ +E       +  +Y  FGF+  +  LST
Sbjct: 468 RNELSGTLSGLTRVRRFQQDDAHIFCRPDQVQDEITHALEFLKFVYNTFGFDFSVC-LST 526

Query: 430 RPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGR 489
           RP+K +GS A+WD AEN +K  L+         I+  +  G+GAFYGPK +  L+DA+ R
Sbjct: 527 RPKKAIGSRAIWDTAENGLKNALEACG------IDYDLNPGDGAFYGPKIDIRLRDALNR 580

Query: 490 DWQCGTIQVDFNLPSRFNAFYVNSHSEK-------------------------------- 517
             QCGTIQ+DFNLP RFN  Y  + +E+                                
Sbjct: 581 YHQCGTIQLDFNLPIRFNLQYRTAETEESGDAHSVSEAANSPADDHQEKAGQNSAAVENV 640

Query: 518 ------------------CHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTT 559
                               PVM+HRA+ GSIER   I+ E++ G  P WLSP Q +V  
Sbjct: 641 GSKAKADEITLGELKHGFERPVMVHRAILGSIERCTAILTEHYGGKWPFWLSPRQVMVVP 700

Query: 560 ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSI 619
           ++    +YA  +   L       + D    T+N K+RE  +     I + G+KE ++ ++
Sbjct: 701 VSDKYSDYADYLRKQLVRLGYEADADLSTRTMNKKVREAQVAAYNYIAVVGEKEQNDLTV 760

Query: 620 GIRRFGS-TTTQKVSLLDAIPILTKES 645
            +R+  +        + + + +  KES
Sbjct: 761 TLRKRDTVRPLGTFGIAEMLDMFEKES 787


>gi|258568114|ref|XP_002584801.1| threonyl-tRNA synthetase [Uncinocarpus reesii 1704]
 gi|237906247|gb|EEP80648.1| threonyl-tRNA synthetase [Uncinocarpus reesii 1704]
          Length = 756

 Score =  556 bits (1432), Expect = e-156,   Method: Composition-based stats.
 Identities = 228/685 (33%), Positives = 360/685 (52%), Gaps = 63/685 (9%)

Query: 4   DIKLTFPDG-----SIKNFPVHATGSDVAESISRSLAKKAVAVAINGK-VCDLSDPVR-E 56
           DI +T   G     ++      +T     + I +  +   V   ++GK + DL  P+  +
Sbjct: 75  DITVTLDLGNGAPATVIAKAWESTPGSFLKDIPKEFSSNVVIAKLDGKQLWDLDRPLERD 134

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD--KEQPF 114
             +  +  + P    V  HS AH++ EA +  +    ++ GP    GF+YD         
Sbjct: 135 CRVSYLPFDSPEGREVFWHSSAHVLGEAAECEY-GCMLSHGPPTAQGFFYDMALPNNGVV 193

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
              +   ++ +  +I      F +  +S E  +++F   K  YK+  + ++   E+ T+Y
Sbjct: 194 KESDWPSLDSRSSKIFKEKQSFDRLEVSKEDLKKMFSYSK--YKMHYINNLVEGESSTVY 251

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
           R G   DLCRGPH++STG++K   K+M+ + AY+ GD +   L RI G A+  ++ L  +
Sbjct: 252 RCGTLVDLCRGPHIQSTGKIK-AMKIMQNSSAYFLGDQSNDSLQRIRGVAFPDKKSLQGH 310

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEE 293
           L FLEE+EKR+H K+ +E +LF   E   G  F    G KIF +L   +R + +   Y+E
Sbjct: 311 LKFLEEAEKRNHLKIGKEQELFFFDEVSPGCPFLLPNGTKIFNSLQKLLRTEYRKRGYQE 370

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           + +P + D  LW+ SGHW+ Y+ +MF +        + R +ALKPMNCPGH  +FNH  +
Sbjct: 371 VQSPNMYDVGLWRTSGHWNHYKDDMFKL------AVEKREWALKPMNCPGHCIMFNHRER 424

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYRELP+R+A+FG ++RNE SG+LHGL RVR F QDD H+FCT++Q+  E   + + + +
Sbjct: 425 SYRELPLRMADFGVLHRNEASGALHGLTRVRKFQQDDTHIFCTEDQITQEIEGLFDFLRA 484

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           IY  FGF    +KLSTRPEK +G    W+ AE  +K  L   K S     +  +  G+GA
Sbjct: 485 IYGLFGF-SFKLKLSTRPEKYLGKLETWNFAEAQLKEALTRFKGS-----DWEIDEGDGA 538

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK---------------- 517
           FYGPK +  ++DA+ R++QC TIQ+D+ LP  F   Y+ + + +                
Sbjct: 539 FYGPKIDITIQDALKREFQCATIQLDYQLPQNFKLEYMTNETGRPKATDAKKDETSPKGD 598

Query: 518 -----------------CHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTI 560
                              PVMIHRA+ GS ERF GI+IE+F G  P WLSP Q ++  +
Sbjct: 599 DDNPSPDSDDGTPGPGRARPVMIHRAIIGSFERFFGILIEHFGGKWPFWLSPRQILIVPV 658

Query: 561 TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
             +  +Y +E+  +L+   L+++ D    T+  KIR   + +   I + G +E   R++ 
Sbjct: 659 MPAVYDYVEELQGILRGDKLNVDIDVSGNTLQKKIRNGQLAQYNFIFVVGAQEKETRTVN 718

Query: 621 IRRFGSTTTQK----VSLLDAIPIL 641
           IR     ++Q     + L +A   L
Sbjct: 719 IRNRDDPSSQAKGSLIPLDEARAKL 743


>gi|227496236|ref|ZP_03926533.1| threonine--tRNA ligase [Actinomyces urogenitalis DSM 15434]
 gi|226834224|gb|EEH66607.1| threonine--tRNA ligase [Actinomyces urogenitalis DSM 15434]
          Length = 679

 Score =  555 bits (1431), Expect = e-156,   Method: Composition-based stats.
 Identities = 240/675 (35%), Positives = 357/675 (52%), Gaps = 47/675 (6%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI-E 60
           P  + +T  DG+ +      TG+ + E       +  VA+ ++G+  DLS  +  G++ E
Sbjct: 3   PQQLTITL-DGAERIIEEGTTGTTLFEG-----DRDVVAMKVDGEPWDLSRELHTGAVVE 56

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            IT      L ++RHS  H+MA+AVQ I+PEV + IGP I DGFYYDF      + + L 
Sbjct: 57  PITLASQDGLNILRHSATHVMAQAVQEIFPEVNLGIGPFITDGFYYDFGNIDAVTPELLK 116

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK------------ 168
            IEK+M+ I+     F+++ +S E+ R   E   + YK+E++++                
Sbjct: 117 DIEKRMKRIVKEGQSFVRREISEEEGR--VELADQPYKLELIDTKGKGAEASASVEVGAG 174

Query: 169 -----ENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
                +NV    +  W DLCRGPH+ ST  + + F L K + AYW+GD +   L RIYGT
Sbjct: 175 GLTIYDNVRRNGEVAWKDLCRGPHLPSTKLIGQGFALTKSSSAYWKGDQHGDSLQRIYGT 234

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISY 282
           AW ++++L  Y   L E+ KRDHRKL  E+DLF   E+ G G++ +H KG  +   +  Y
Sbjct: 235 AWASKEDLKAYQTRLAEAAKRDHRKLGAELDLFSFPEEIGPGLVVFHPKGGMLRHEIEKY 294

Query: 283 -MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTI-------KDLRTF 334
            + R  +  ++ ++TP++    L+  SGH   Y   MF    AD+         K  + +
Sbjct: 295 VIERHERAGFDFVHTPEITKAGLFHTSGHLPYYADTMFPPMLADEETDAEGNVTKAGQEY 354

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
            LK MNCP H  +F    +SYRELP+RL E G  YR E SG +HGL R+RGFTQDD+H +
Sbjct: 355 YLKAMNCPMHNLIFRSRGRSYRELPLRLFEMGHDYRYEKSGVVHGLTRMRGFTQDDSHTY 414

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK------RVGSDALWDDAENIM 448
           CT+EQ   E  K     ISI K FG     ++LSTR E        +GSD  W+ A   +
Sbjct: 415 CTREQAPEEIKKQIEFFISILKAFGLTDFYLELSTRDEDGAKKDKFIGSDEDWEAATRTL 474

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
             V  +        ++     G  AFYGPK    +KDAIGR WQ  TIQ DFN P RF+ 
Sbjct: 475 SQVCASTG------LDLVPDPGGAAFYGPKVSVQVKDAIGRTWQMSTIQYDFNQPERFDL 528

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYA 568
            Y  +      P+M+H A  GS+ERFIG++ E++ G  P WL+P+Q  +  +  +  +Y 
Sbjct: 529 EYTAADGSHQRPIMLHSAKLGSVERFIGVLTEHYAGAFPAWLAPVQVRLIPVAEAFDDYV 588

Query: 569 QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
            ++A  L+   + +ETD  ++    KIR  S +K+P  +I G ++A   ++  R      
Sbjct: 589 TQVAARLRERGVRVETDLSDDRFGKKIRNASKEKVPFTLIAGGEDAEAGAVSFRFRDGEQ 648

Query: 629 TQKVSLLDAIPILTK 643
           T  V + +AI  +  
Sbjct: 649 TNGVPVDEAIEHIAD 663


>gi|297571384|ref|YP_003697158.1| threonyl-tRNA synthetase [Arcanobacterium haemolyticum DSM 20595]
 gi|296931731|gb|ADH92539.1| threonyl-tRNA synthetase [Arcanobacterium haemolyticum DSM 20595]
          Length = 670

 Score =  555 bits (1430), Expect = e-156,   Method: Composition-based stats.
 Identities = 235/672 (34%), Positives = 363/672 (54%), Gaps = 50/672 (7%)

Query: 9   FPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSD---PVREG-SIEIITP 64
             DG++       +GS+          +  VA+ ++G + DL      + +G ++E +  
Sbjct: 4   LIDGNVHECDSPLSGSEFYAD-----QRTIVALRVDGVLKDLDTDLATLADGATVEGVDI 58

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
            +P  L ++RHS  H++A+AVQ+ +P+V + IGP I DGFYYDF   +  + + L Q+EK
Sbjct: 59  SEPDGLNILRHSATHVLAQAVQNRFPDVNLGIGPFITDGFYYDFGNIESVTPELLKQLEK 118

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE--------------------- 163
            M  I+     F+++ +S + ARE  E   + YK+E++                      
Sbjct: 119 DMMRIVKEGQRFVRRPISDDDARE--ELASQPYKLELISLKGGSDADRDQAADGASIEVG 176

Query: 164 --SIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIY 221
              +   +NV       W DLCRGPH+ ST  +   F L + + AYWRGD     L RIY
Sbjct: 177 GGELTMYDNVRRNGDVVWTDLCRGPHLPSTKLIGNGFALTRSSAAYWRGDQANDSLQRIY 236

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLI 280
           GTAW ++ EL  Y   + E+E+RDHRKL  E+DLF   ++ GSG+  +H KG  I   + 
Sbjct: 237 GTAWPSKDELRAYQERIAEAERRDHRKLGSELDLFSFPDEIGSGLAVFHPKGGIIRMEME 296

Query: 281 SYMRRKIKDD-YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT-------IKDLR 332
           +Y R+K  +  Y  +NTP +   +L++ SGH D Y   M+     D+         K   
Sbjct: 297 NYSRQKHIEGNYSFVNTPHITKGNLFEVSGHLDFYADGMYPPMHMDEERDADGNITKQGA 356

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
            + LKPMNCP H  V+    +SYRELP+RL EFG+VYRNE SG +HGL R RGFTQDDAH
Sbjct: 357 DYYLKPMNCPMHNLVYKSRGRSYRELPLRLFEFGTVYRNEASGVVHGLTRARGFTQDDAH 416

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLS-TRPEKRVGSDALWDDAENIMKGV 451
           ++CT++QM +E  ++   ++ + KD+G +   ++LS   P+K VG D +W+++   ++ V
Sbjct: 417 IYCTRDQMKDELTRLLTFVLDLLKDYGLDDFYLELSTKNPKKFVGDDDVWEESTRTLQEV 476

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
            +         +         AFYGPK     KDA+GR WQ  TIQ+DFNLP RF+  Y 
Sbjct: 477 AEASG------LELVPDPEGAAFYGPKISVQAKDALGRTWQMSTIQLDFNLPERFDLEYT 530

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
               E+  PVMIHRA+FGSIERF G++ E++ G  P WL+P+Q     +  +  +Y   +
Sbjct: 531 GPDGERHRPVMIHRALFGSIERFFGVLTEHYAGAFPAWLAPVQVRCVPVADAFNDYLDSV 590

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
           A+ L++  + +E D  ++    KIR  S  K+P  +I G ++    ++  R    +    
Sbjct: 591 ADKLRAQGVRVEVDKSDDRFPKKIRNASKDKVPFTLIAGGEDMEAGAVSFRMRDGSQDNG 650

Query: 632 VSLLDAIPILTK 643
           V++ +A+  +  
Sbjct: 651 VAVDEAVARIVD 662


>gi|118462301|ref|YP_882672.1| threonyl-tRNA synthetase [Mycobacterium avium 104]
 gi|254775941|ref|ZP_05217457.1| threonyl-tRNA synthetase [Mycobacterium avium subsp. avium ATCC
           25291]
 gi|166225462|sp|A0QID4|SYT_MYCA1 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|118163588|gb|ABK64485.1| threonyl-tRNA synthetase [Mycobacterium avium 104]
          Length = 684

 Score =  555 bits (1430), Expect = e-156,   Method: Composition-based stats.
 Identities = 247/671 (36%), Positives = 366/671 (54%), Gaps = 45/671 (6%)

Query: 17  FPVHATGSDVAESIS---RSLAKKAVAVA-INGKVCDLSD-PVREGSIEIITPEDPRSLA 71
            P   T +          R      V V   +G + DLS  P  +  +  +        +
Sbjct: 15  VPAGTTAAAAVRDAGLPGRGAPDAVVVVRDASGTLRDLSWVPDTDAEVVPVAANTDEGRS 74

Query: 72  VIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIA 131
           VIRHS AH++A+AVQ ++P+ ++ IGP I DGFYYDFD  +PF+ ++L ++EK+M++I+ 
Sbjct: 75  VIRHSAAHVLAQAVQELFPQAKLGIGPPITDGFYYDFDVPEPFTPEDLDKLEKRMRQIVK 134

Query: 132 RDSPFLKQYL-SHEKARELFESKKEAYKVEILESIPAKENV--------TLY-------R 175
               F ++   S E+AR   E   E YK+E+++      ++        T Y       R
Sbjct: 135 EGQLFSRRVYESKEQARA--ELAGEPYKLELVDDKSGDPDIMEVGGDELTAYDNLNPRTR 192

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
           +  W DLCRGPH+ +T  +  F KL + + AYWRGD N   L RIYGTAW +Q+ L  +L
Sbjct: 193 ERVWGDLCRGPHIPTTRHIPAF-KLTRSSAAYWRGDQNNASLQRIYGTAWESQEALDDHL 251

Query: 236 YFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEE 293
             +EE+++RDHRKL  E+DLF   ++ GSG+  +H +G  + + L  Y RRK  +  YE 
Sbjct: 252 RLIEEAQRRDHRKLGSELDLFSFPDEIGSGLAVFHPRGGVVRRELEEYSRRKHIEAGYEF 311

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD-------LRTFALKPMNCPGHVA 346
           +NTP +    L+  SGH D Y   MF     D    D        + + LKPMNCP H  
Sbjct: 312 VNTPHITKAQLFHTSGHLDWYADGMFPPMHLDAEYDDDGTVRKPGQDYYLKPMNCPMHTL 371

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           ++    +SYRELP+RL EFG+VYR E SG +HGL R RGFT DD+H+FCT+EQ+  E   
Sbjct: 372 IYRSRGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTMDDSHIFCTREQLHGELAS 431

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
           +   ++ +  D+G     ++LST+     VGSD +W+ A   +  V      +++  +  
Sbjct: 432 LLRFVLELLGDYGLTDFYLELSTKDPDKFVGSDEMWEQATTSLADV------AAESGLEL 485

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
               G  AFYGPK     +DA+GR WQ  TIQVDFN P RF   Y  S   +  PVMIHR
Sbjct: 486 VPDPGGAAFYGPKISVQARDALGRSWQMSTIQVDFNFPERFELEYTASDGTRQRPVMIHR 545

Query: 526 AVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD 585
           A+FGSIERF GI+ E++ G  P WL+P+QA+   +    V Y + +A  LKSH + +E D
Sbjct: 546 ALFGSIERFFGILTEHYAGAFPAWLAPVQAVGIPVADEHVPYLESVAAQLKSHGVRVEVD 605

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK-- 643
             ++ +  KI  H+ +K+P +++ GD++ +  ++  R    T    V    A+  + K  
Sbjct: 606 ASDDRMAKKIVHHTAQKVPFMLLAGDRDVAAGAVSFRFGDRTQINGVPRDSAVDAIVKWI 665

Query: 644 ---ESLPPDCQ 651
              E+  P  +
Sbjct: 666 ADRENSVPSAE 676


>gi|163840754|ref|YP_001625159.1| threonyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
 gi|162954230|gb|ABY23745.1| threonyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
          Length = 700

 Score =  555 bits (1429), Expect = e-155,   Method: Composition-based stats.
 Identities = 242/671 (36%), Positives = 373/671 (55%), Gaps = 44/671 (6%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           S I +T  DG+  +     TG++          ++ V V +NG++ DL  P+     ++ 
Sbjct: 24  STISITL-DGNPTDLTEGTTGAE-----VYRERREVVVVRVNGELKDLDQPLPANAQVDA 77

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +T +    L V+RHS AH+MA+AVQ +  + ++ IGP I DGFY+DFD ++PF+ ++L Q
Sbjct: 78  VTIDSADGLDVLRHSAAHVMAQAVQQLSQDAKLGIGPYITDGFYFDFDVDEPFTPEDLKQ 137

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-------------ESIPAK 168
           +EK M +I+  +  F ++ +S  +A E  +   E YK+E++                   
Sbjct: 138 LEKMMLKIVNANQRFQRRVVSETEAIEAMK--DEPYKLELIGLKGGSAEAAEGASQEVGA 195

Query: 169 ENVTLYRQGE------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYG 222
             +T+Y   +      W DLCRGPH+ +T  +   + L + + AYWRGD     L RIYG
Sbjct: 196 GELTIYANLDRDENVVWQDLCRGPHLPNTKLISNAYALTRSSAAYWRGDQANKQLQRIYG 255

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLIS 281
           TAW T+  L  Y   + E+E+RDHRKL  E+DLF   ++ GSG+  +H KG  I + +  
Sbjct: 256 TAWPTKDALKAYQERIAEAERRDHRKLGTELDLFSFPDELGSGLPVFHPKGGIIRKEMED 315

Query: 282 YMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD-------LRT 333
           Y R R I   YE + TP +   +L++ SGH D YR  MF     D+ + +        + 
Sbjct: 316 YSRARHIAAGYEFVYTPHITKANLYEVSGHLDWYRDGMFPPMHVDEELNEDGTVRKPGQD 375

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
           + LKPMNCP H  +F    +SYRELP+RL EFGSVYR E SG +HGL RVRG TQDDAH+
Sbjct: 376 YYLKPMNCPMHNLIFRSRGRSYRELPLRLFEFGSVYRYEKSGVIHGLTRVRGMTQDDAHI 435

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVL 452
           +CT++QM +E     N ++ + KD+G E   ++LST+  +  VGSD +W++A   +  V 
Sbjct: 436 YCTRDQMKDELTSTLNFVLGLLKDYGLEDFYLELSTKDPEKYVGSDDVWEEATRTLAEV- 494

Query: 453 DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
                +++  ++     G  AFYGPK     +DAIGR WQ  TIQ+DFNLP RF   Y  
Sbjct: 495 -----AAESGLDLVPDPGGAAFYGPKISVQARDAIGRTWQMSTIQLDFNLPERFELEYQA 549

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIA 572
           +   +  PVMIHRA+FGS+ERF+ ++ E++ G  P WL+P+Q +   +  +  +Y  ++ 
Sbjct: 550 ADGSRQRPVMIHRALFGSVERFMAVLTEHYAGAFPAWLAPVQVVGIPVAETFNDYMADVV 609

Query: 573 NLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
             L+S  +  E D  ++    KIR  S +KIP ++I G  +    ++  R    +    V
Sbjct: 610 GQLRSAGVLAELDISSDRFPKKIRTASKEKIPFVLIAGGDDVEAGAVSFRFRDGSQDNGV 669

Query: 633 SLLDAIPILTK 643
            + +A+  + +
Sbjct: 670 PVAEAVQRIVR 680


>gi|160914239|ref|ZP_02076460.1| hypothetical protein EUBDOL_00249 [Eubacterium dolichum DSM 3991]
 gi|158433866|gb|EDP12155.1| hypothetical protein EUBDOL_00249 [Eubacterium dolichum DSM 3991]
          Length = 610

 Score =  555 bits (1429), Expect = e-155,   Method: Composition-based stats.
 Identities = 239/609 (39%), Positives = 376/609 (61%), Gaps = 19/609 (3%)

Query: 39  VAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP 98
           V++  NG+   L    +E   ++I  ++   L+V+ HSCAH+MA+AV+ ++P+ +  +GP
Sbjct: 12  VSLFFNGRRIHLKSKKKEEEKKMIDIKEHEQLSVMNHSCAHMMAQAVKRLYPQAKFWVGP 71

Query: 99  IIEDGFYYDFD-KEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAY 157
           ++ +GFYYD D  +Q    ++LA+IEK+M++I       +++ +S ++A E+     + Y
Sbjct: 72  VVSEGFYYDIDLGDQVIKDEDLAKIEKEMKKIAKDGKRIVRKEISKDEALEM--FGDDPY 129

Query: 158 KVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPML 217
           KV++++ +    N+T Y+QGE+ DLCRGPHV S  Q+K F KL+K +GAYW+GD+N  +L
Sbjct: 130 KVDLIQDL-EDGNITCYQQGEFIDLCRGPHVESVKQLKNF-KLLKHSGAYWKGDANNKVL 187

Query: 218 SRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQ 277
            RIYG  + T +EL ++L+ LEE++KRDH+KL RE+ +F ++E   G+ F+   G  +  
Sbjct: 188 QRIYGVCFPTAEELEEHLHLLEEAKKRDHKKLGRELGIFMMSEYAPGMPFFLPNGMILRN 247

Query: 278 TLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFAL 336
            L ++   +  K+ Y+ I TP ++ + LW+ SGHWD+Y+ NM+          D R FA+
Sbjct: 248 ILENFWYEEHTKEHYQFIKTPIMMSKELWETSGHWDNYKENMYISMV------DDREFAI 301

Query: 337 KPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT 396
           KPMNCPG +  +  GL SY++ P+R+ E G V+R+E SG+L+GL RVR FTQDDAH+F  
Sbjct: 302 KPMNCPGALLAYKAGLHSYKDFPLRMGELGQVHRHEASGALNGLFRVRTFTQDDAHIFMR 361

Query: 397 KEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIK 456
            +Q+ +E + + + I  IY   G    +   +   EK +G  A+W+ +E  +        
Sbjct: 362 PDQIESEVMSLISFIDRIYASLGLSYRIELSTRPEEKYIGDLAIWEASEAALAAACKHAG 421

Query: 457 NSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE 516
                  +  V  G+GAFYGPK ++ +KD++GR+WQCGTIQ+D NLP RF+  YV S   
Sbjct: 422 K------DYKVNPGDGAFYGPKLDFHIKDSLGREWQCGTIQLDMNLPERFDLTYVESDGS 475

Query: 517 KCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLL 575
           K  PVM+HR +FGSIERFIGI+IE+F G+ P WL+P Q +V  +     + YA+++  +L
Sbjct: 476 KARPVMLHRVIFGSIERFIGILIEHFAGHFPTWLAPQQIMVVPVHYEKHLSYAEKVNEML 535

Query: 576 KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
             +    + D RNE + Y+IRE  + KIP  I+ GD E    ++ IRR     +  + L 
Sbjct: 536 VQNGFRSKLDARNEKLGYRIREAQLAKIPYQIVLGDGEEENGTVTIRRAQGKDSTTLPLD 595

Query: 636 DAIPILTKE 644
             I +L +E
Sbjct: 596 AFIAMLKEE 604


>gi|291516871|emb|CBK70487.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Bifidobacterium
           longum subsp. longum F8]
          Length = 677

 Score =  555 bits (1429), Expect = e-155,   Method: Composition-based stats.
 Identities = 240/667 (35%), Positives = 364/667 (54%), Gaps = 43/667 (6%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           + I +T  +G  K      TG ++         K  +AV ING+  DL  P+ +G +++ 
Sbjct: 4   ATISITV-NGEAKEVEATTTGVELFAE-----DKNIIAVKINGENRDLYTPLNDGDTVDP 57

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           I  +    LA++RHS  H+MA+AVQ ++P  ++ +GP+I+DGFYYDF  +QPF+ ++L  
Sbjct: 58  IALDSEDGLAIMRHSATHVMAQAVQEVYPNAKLGVGPVIKDGFYYDFQVDQPFTPNDLKD 117

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPA-----------KEN 170
           IEK+MQ II     F ++ ++ E+A +  E   + +K+E++E   A           ++ 
Sbjct: 118 IEKRMQRIIKSSQSFRRRSVTEEEALK--EEADQPFKIELIEDKEAHLDPAAATEISEKE 175

Query: 171 VTLYRQGE------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTA 224
           ++ Y   +      W DLCRGPH+ +T  +K F K+ + A AYWRG    P + R+YGTA
Sbjct: 176 LSFYDNVDRDGNVVWKDLCRGPHLPNTRYIKAF-KIERSAAAYWRGSEKNPTMQRVYGTA 234

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM 283
           W T+++L  Y   LEE+ KRDHRKL  EMDLF   ++ G G+  +H KG  +   +  Y 
Sbjct: 235 WATKEDLKAYQTRLEEAAKRDHRKLGAEMDLFSFPDEIGPGLAVFHPKGAAVINAMEDYS 294

Query: 284 RR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT-------IKDLRTFA 335
           R    K  Y  + TP +    L++ SGH   Y+  M+     D+         K    + 
Sbjct: 295 REMHCKHHYSFVQTPHITKGGLYETSGHLHWYKDGMYPPMHLDEEKDADGNITKPGADYY 354

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC 395
           LKPMNCP H  +F    +SYRELP+RL EFG+VYR E SG +HGL RVRG TQDD+H++C
Sbjct: 355 LKPMNCPMHNLIFKSRQRSYRELPLRLFEFGTVYRYEKSGEVHGLTRVRGLTQDDSHIYC 414

Query: 396 TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDT 454
           T+EQM +E   +   ++++ KDFG     ++LST+     VGSD +W++A N +  V   
Sbjct: 415 TREQMKDELTSLLTFVLNLLKDFGLTDFYLELSTKDPNKYVGSDEIWEEATNTLAEVAK- 473

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH 514
                +  +         AFYGPK     +DAIGR WQ  TIQ+DFNLP RF   Y+   
Sbjct: 474 -----ESNLELVDDPCGAAFYGPKISVQARDAIGRTWQVSTIQLDFNLPERFQLEYIAKD 528

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANL 574
                PVMIHRA+FGSIERF  +++E++ G  P WL+P+Q +   +      +       
Sbjct: 529 GTHQRPVMIHRALFGSIERFFAVLLEHYAGAFPAWLAPVQVLGVPVADEFAPHLAGFVKS 588

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           L+   +  E D+ ++    KIR  S  K+P I+I G+++ +  ++  R    +    V +
Sbjct: 589 LEDEMVRCEIDYSDDRFGKKIRNASKSKVPFILIVGEEDMNNNAVSFRFRDGSQLNGVPV 648

Query: 635 LDAIPIL 641
             A   +
Sbjct: 649 DTAREQI 655


>gi|76801848|ref|YP_326856.1| threonyl-tRNA synthetase [Natronomonas pharaonis DSM 2160]
 gi|121731906|sp|Q3IRE7|SYT_NATPD RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|76557713|emb|CAI49296.1| threonine--tRNA ligase [Natronomonas pharaonis DSM 2160]
          Length = 642

 Score =  555 bits (1429), Expect = e-155,   Method: Composition-based stats.
 Identities = 242/646 (37%), Positives = 373/646 (57%), Gaps = 22/646 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEI 61
           S+I +T PDGS       +T  DVA  I   L    VA  ++G++ D ++ + +   + I
Sbjct: 2   SEIVVTLPDGSELEMESGSTVEDVAYEIGPGLGDDTVAGVVDGELVDKAEQLTDDCELVI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +T +    L V+RHS AH+ A+A+Q + PE ++AIGP  E+GFYYD        +D+L  
Sbjct: 62  VTDQSDEYLQVLRHSAAHVFAQALQRLHPEAKLAIGPPTEEGFYYDVTGVD-LDADDLEA 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWF 180
           IE +M+ II  D    +   S E+A E++E     YK +ILE+  A E+ V+ Y Q +W 
Sbjct: 121 IEAEMETIIEADHDIERAERSREEAFEIYE--DNPYKRDILETEAADEDPVSFYTQDDWQ 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLC+GPHV STG++    +L+ +A AYWRGD +   L+R+YGTA+ ++ +L  +L   EE
Sbjct: 179 DLCQGPHVDSTGEIG-AVELLNIAAAYWRGDEDNETLTRVYGTAFESESDLEGFLQRREE 237

Query: 241 SEKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++KRDHRKL +E+DLF I +  G G+  +H  G  + + L  ++ +   D  YE + TP 
Sbjct: 238 AKKRDHRKLGQELDLFSIPDVTGPGLPLYHPNGKAVLRELEDFVDQLNDDQGYEFVETPH 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW+QSGH+++Y  +MF +   D        + LKPMNCPGH  +FN G  SYR+L
Sbjct: 298 LFRTELWKQSGHYENYVDDMFLLDVND------EEYGLKPMNCPGHATIFNQGNWSYRDL 351

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           PVR AE G VYR E  G L GL RV  FT DD H+F  ++ +  E   I + I  +   F
Sbjct: 352 PVRYAENGKVYRKEQRGELSGLSRVWAFTIDDGHLFVERDAIEQEVNVIMDQIEEVLDTF 411

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
             +  +  L+TRPEK VGSD +W+ A+  ++ VL++        ++  +  G+GAFYGPK
Sbjct: 412 DLDYEVA-LATRPEKSVGSDEIWEQAQTQLRSVLESSG------MDYDIESGDGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++  +DA+GR+W   T+Q+DFN+P RF+  Y    +E+  PVMIHRA++GS ERF  ++
Sbjct: 465 IDFAFEDALGRNWDGPTVQLDFNMPERFDLTYTGEDNEEHRPVMIHRALYGSYERFFMVL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+F GN P WL+P Q  +  ++   + YA+++ N        +E + R+ T+  KI+  
Sbjct: 525 IEHFDGNFPTWLAPEQVRILPVSDDNIGYAKQLKNRYLD-DFRVEIEDRSWTVGKKIQTA 583

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
              ++P +++ GD E    ++ +R       + V +      L  E
Sbjct: 584 HDDRVPYMLVVGDNEEEAGTVSVRDRFEDERKDVDVETFRDHLASE 629


>gi|312132685|ref|YP_004000024.1| thrs [Bifidobacterium longum subsp. longum BBMN68]
 gi|322689212|ref|YP_004208946.1| threonyl-tRNA synthase [Bifidobacterium longum subsp. infantis
           157F]
 gi|311773642|gb|ADQ03130.1| ThrS [Bifidobacterium longum subsp. longum BBMN68]
 gi|320460548|dbj|BAJ71168.1| threonyl-tRNA synthase [Bifidobacterium longum subsp. infantis
           157F]
          Length = 677

 Score =  555 bits (1429), Expect = e-155,   Method: Composition-based stats.
 Identities = 242/667 (36%), Positives = 364/667 (54%), Gaps = 43/667 (6%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           + I +T  +G  K      TG ++         K  +AV ING+  DL  P+ +G +++ 
Sbjct: 4   ATISITV-NGEAKEVEATTTGVELFAE-----DKNIIAVKINGENRDLYTPLNDGDTVDP 57

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           I  +    LA++RHS  H+MA+AVQ ++P  ++ +GP+I+DGFYYDF  +QPF+ D+L  
Sbjct: 58  IALDSEDGLAIMRHSATHVMAQAVQEVYPNAKLGVGPVIKDGFYYDFQVDQPFTPDDLKD 117

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPA-----------KEN 170
           IEK+MQ II     F ++ ++ E+A +  E   + +K+E++E   A           ++ 
Sbjct: 118 IEKRMQRIIKSSQSFRRRSVTEEEALK--EEADQPFKIELIEDKEAHLDPAAATEISEKE 175

Query: 171 VTLYRQGE------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTA 224
           ++ Y   +      W DLCRGPH+ +T  +K F K+ + A AYWRG    P + RIYGTA
Sbjct: 176 LSFYDNVDRDGNVVWKDLCRGPHLPNTRYIKAF-KIERSAAAYWRGSEKNPTMQRIYGTA 234

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM 283
           W T+++L  Y   LEE+ KRDHRKL  EMDLF   ++ G G+  +H KG  +   +  Y 
Sbjct: 235 WATKEDLKAYQTRLEEAAKRDHRKLGAEMDLFSFPDEIGPGLAVFHPKGAAVINAMEDYS 294

Query: 284 RR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT-------IKDLRTFA 335
           R    K  Y  + TP +    L++ SGH   Y+  M+     D+         K    + 
Sbjct: 295 REMHRKHHYSFVQTPHITKGGLYETSGHLHWYKDGMYPPMHLDEEKDADGNITKPGADYY 354

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC 395
           LKPMNCP H  +F    +SYRELP+RL EFG+VYR E SG +HGL RVRG TQDD+H++C
Sbjct: 355 LKPMNCPMHNLIFKSRQRSYRELPLRLFEFGTVYRYEKSGEVHGLTRVRGLTQDDSHIYC 414

Query: 396 TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDT 454
           T+EQM +E   +   ++++ KDFG     ++LST+     VGSD +W++A N +  V   
Sbjct: 415 TREQMKDELTSLLTFVLNLLKDFGLTDFYLELSTKDPNKYVGSDEIWEEATNTLAEVAK- 473

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH 514
                +  +         AFYGPK     +DAIGR WQ  TIQ+DFNLP RF   Y+   
Sbjct: 474 -----ESNLELVDDPCGAAFYGPKISVQARDAIGRTWQVSTIQLDFNLPERFQLEYIAKD 528

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANL 574
                PVMIHRA+FGSIERF  +++E++ G  P WL+P+Q +   +      +       
Sbjct: 529 GTHQRPVMIHRALFGSIERFFAVLLEHYAGAFPAWLAPVQVLGVPVADEFAPHLAGFVKS 588

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           L+   +  E D+ ++    KIR  S  K+P I+I G+++ +  ++  R    +    V +
Sbjct: 589 LEDEMVRCEIDYSDDRFGKKIRNASKSKVPFILIVGEEDMNNNAVSFRFRDGSQLNGVPV 648

Query: 635 LDAIPIL 641
             A   +
Sbjct: 649 DKAREQI 655


>gi|183601640|ref|ZP_02963010.1| threonyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           HN019]
 gi|219683826|ref|YP_002470209.1| threonyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           AD011]
 gi|241190862|ref|YP_002968256.1| threonyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           Bl-04]
 gi|241196268|ref|YP_002969823.1| threonyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           DSM 10140]
 gi|254783508|sp|B8DUF4|SYT_BIFA0 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|183219246|gb|EDT89887.1| threonyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           HN019]
 gi|219621476|gb|ACL29633.1| threonyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           AD011]
 gi|240249254|gb|ACS46194.1| threonyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           Bl-04]
 gi|240250822|gb|ACS47761.1| threonyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           DSM 10140]
 gi|289178601|gb|ADC85847.1| Threonyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           BB-12]
 gi|295793851|gb|ADG33386.1| threonyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           V9]
          Length = 692

 Score =  554 bits (1428), Expect = e-155,   Method: Composition-based stats.
 Identities = 254/669 (37%), Positives = 374/669 (55%), Gaps = 43/669 (6%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEI 61
           + I +T  +G  K      TG ++         K  +AV +NG++ DL  P+ +G  +E 
Sbjct: 4   AHISITV-NGEAKEVEASQTGVELFAD-----DKNIIAVRLNGELRDLYTPLHDGDNVES 57

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +T + P    ++RHS  H+MA+AVQ + P+ ++ IGP+IE+GFYYDFD + PF+ D+L  
Sbjct: 58  VTLDSPDGTGIMRHSATHVMAQAVQEVRPDAKLGIGPVIENGFYYDFDVKDPFTPDDLKT 117

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-----------EN 170
           IEK MQ II     F ++ +S E+A  L E   E YK+E+++                + 
Sbjct: 118 IEKHMQRIIKSAQRFQRRVVSEEEA--LREEADEPYKIELIKDKEDALETEAAVDISHKE 175

Query: 171 VTLY----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTA 224
           +++Y    R+G   W DLCRGPH+ +T  +K F KL + A AYW+G    PML RIYG A
Sbjct: 176 LSMYDNLDREGNVVWSDLCRGPHLPNTRYIKAF-KLERAAAAYWKGSEANPMLQRIYGVA 234

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM 283
           + T+ EL  Y   +EE+ KRDHRKL +EMDLF   ++ G G+  +H KG  I   +  Y 
Sbjct: 235 FPTKDELKAYQTRMEEAAKRDHRKLGQEMDLFSFPDEIGPGLAVFHPKGAAIINAMEDYS 294

Query: 284 RR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT-------IKDLRTFA 335
           R    K+ Y  + TP +    L++ SGH   Y+  M+     D+        +K    + 
Sbjct: 295 REMHRKNHYSFVQTPHITKGGLYETSGHLQWYKDGMYPPMHLDEEKDENGNIVKQGFDYY 354

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC 395
           LKPMNCP H  +F    +SYRELP+RL EFG+VYR E SG +HGL RVRG TQDD+H++C
Sbjct: 355 LKPMNCPMHNLIFKSRQRSYRELPLRLFEFGTVYRYEKSGVVHGLTRVRGLTQDDSHIYC 414

Query: 396 TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDT 454
           T+EQM +E   + N ++ + KD+G     ++LST+ E   VGSD +W++A N +  V + 
Sbjct: 415 TREQMKDELKNLLNFVLKVLKDYGLNDFYLELSTKDEHKFVGSDEIWEEATNTLAEVAE- 473

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH 514
                +  +      G  AFYGPK     +DAIGR WQ  TIQ+DFNLP RF   Y+   
Sbjct: 474 -----ESGLELVADPGGAAFYGPKISVQARDAIGRTWQVSTIQLDFNLPERFQLEYIAPD 528

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANL 574
                PVMIHRA+FGSIERF  I++E++ G  P WL+P+QA+   +      +  +  N 
Sbjct: 529 GSHQRPVMIHRALFGSIERFFAILLEHYAGAFPAWLAPVQALGVPVADEFAPHLDKFMNS 588

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           L+   + +ETD  ++    KIR  S  K+P III G+++ +  ++  R    +    V +
Sbjct: 589 LEEDLVRVETDNSDDRFGKKIRNASKSKVPYIIIAGEEDMNNNAVSFRFRDGSQLNGVPV 648

Query: 635 LDAIPILTK 643
             A   + +
Sbjct: 649 DQAKAWILE 657


>gi|46191233|ref|ZP_00120366.2| COG0441: Threonyl-tRNA synthetase [Bifidobacterium longum DJO10A]
 gi|189439311|ref|YP_001954392.1| threonyl-tRNA synthetase [Bifidobacterium longum DJO10A]
 gi|238692055|sp|B3DRX5|SYT_BIFLD RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|189427746|gb|ACD97894.1| Threonyl-tRNA synthetase [Bifidobacterium longum DJO10A]
          Length = 677

 Score =  554 bits (1428), Expect = e-155,   Method: Composition-based stats.
 Identities = 242/667 (36%), Positives = 364/667 (54%), Gaps = 43/667 (6%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           + I +T  +G  K      TG ++         K  +AV ING+  DL  P+ +G +++ 
Sbjct: 4   ATISITV-NGEAKEVEATTTGVELFAE-----DKNIIAVKINGENRDLYTPLNDGDTVDP 57

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           I  +    LA++RHS  H+MA+AVQ ++P  ++ +GP+I+DGFYYDF  +QPF+ D+L  
Sbjct: 58  IALDSEDGLAIMRHSATHVMAQAVQEVYPNAKLGVGPVIKDGFYYDFQVDQPFTPDDLKD 117

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPA-----------KEN 170
           IEK+MQ II     F ++ ++ E+A +  E   + +K+E++E   A           ++ 
Sbjct: 118 IEKRMQRIIKSSQSFRRRSVTEEEALK--EEADQPFKIELIEDKEAHLDPAAATEISEKE 175

Query: 171 VTLYRQGE------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTA 224
           ++ Y   +      W DLCRGPH+ +T  +K F K+ + A AYWRG    P + RIYGTA
Sbjct: 176 LSFYDNVDRDGNVVWKDLCRGPHLPNTRYIKAF-KIERSAAAYWRGSEKNPTMQRIYGTA 234

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM 283
           W T+++L  Y   LEE+ KRDHRKL  EMDLF   ++ G G+  +H KG  +   +  Y 
Sbjct: 235 WATKEDLKAYQTRLEEAAKRDHRKLGAEMDLFSFPDEIGPGLAVFHPKGAAVINAMEDYS 294

Query: 284 RR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT-------IKDLRTFA 335
           R    K  Y  + TP +    L++ SGH   Y+  M+     D+         K    + 
Sbjct: 295 REMHRKHHYSFVQTPHITKGGLYETSGHLHWYKDGMYPPMHLDEEKDADGNITKPGADYY 354

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC 395
           LKPMNCP H  +F    +SYRELP+RL EFG+VYR E SG +HGL RVRG TQDD+H++C
Sbjct: 355 LKPMNCPMHNLIFKSRQRSYRELPLRLFEFGTVYRYEKSGEVHGLTRVRGLTQDDSHIYC 414

Query: 396 TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDT 454
           T+EQM +E   +   ++++ KDFG     ++LST+     VGSD +W++A N +  V   
Sbjct: 415 TREQMKDELTSLLTFVLNLLKDFGLTDFYLELSTKDPNKYVGSDEIWEEATNTLAEVAK- 473

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH 514
                +  +         AFYGPK     +DAIGR WQ  TIQ+DFNLP RF   Y+   
Sbjct: 474 -----ESNLELVDDPCGAAFYGPKISVQARDAIGRTWQVSTIQLDFNLPERFQLEYIAKD 528

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANL 574
                PVMIHRA+FGSIERF  +++E++ G  P WL+P+Q +   +      +       
Sbjct: 529 GTHQRPVMIHRALFGSIERFFAVLLEHYAGAFPAWLAPVQVLGVPVADEFAPHLAGFVKS 588

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           L+   +  E D+ ++    KIR  S  K+P I+I G+++ +  ++  R    +    V +
Sbjct: 589 LEDEMVRCEIDYSDDRFGKKIRNASKSKVPFILIVGEEDMNNNAVSFRFRDGSQLNGVPV 648

Query: 635 LDAIPIL 641
             A   +
Sbjct: 649 DTAREQI 655


>gi|256376220|ref|YP_003099880.1| threonyl-tRNA synthetase [Actinosynnema mirum DSM 43827]
 gi|255920523|gb|ACU36034.1| threonyl-tRNA synthetase [Actinosynnema mirum DSM 43827]
          Length = 682

 Score =  554 bits (1428), Expect = e-155,   Method: Composition-based stats.
 Identities = 236/657 (35%), Positives = 362/657 (55%), Gaps = 39/657 (5%)

Query: 17  FPVHAT-GSDVAESISRSLAKKAVAVAIN--GKVCDLS-DPVREGSIEIITPEDPRSLAV 72
                T G+ V E+        A+ V  +  G + DLS  P  +  +E +  +     +V
Sbjct: 17  VTAGTTAGTAVREAGLPGKGPDAIVVVRDAEGHLRDLSWTPQVDVEVEAVAADTEDGRSV 76

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIAR 132
           IRHS AH++A+AVQ  +PE ++ IGP ++DGFYYDF  ++PF+ ++LA +EK+M+ I+  
Sbjct: 77  IRHSTAHVLAQAVQQQFPEAKLGIGPPVKDGFYYDFQVDRPFTPEDLAALEKRMKAIVKG 136

Query: 133 DSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE-------------- 178
              F ++ +    A +  E   E +K+E+++     +   +   G               
Sbjct: 137 AQRFTRRVVESTDAAK-AELASEPFKLELVDVKGGVDTAEVMEVGGGELTIYDNLDPRSG 195

Query: 179 ---WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
              W DLCRGPH+ +T  +  F KL +VA AYWRG+   P L RIYGTAW +Q+ L +++
Sbjct: 196 ERVWGDLCRGPHLPTTKHIPAF-KLTRVAAAYWRGNEKNPQLQRIYGTAWESQEALDKHV 254

Query: 236 YFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEE 293
             + E+E+RDHRKL  E+DLF   ++ GSG+  +H +G  I + +  Y R R   + YE 
Sbjct: 255 ELIAEAERRDHRKLGVELDLFSFPDEIGSGLAVFHPRGGIIRKAMEDYSRARHEAEGYEF 314

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD-------LRTFALKPMNCPGHVA 346
           + +P +   +L++ SGH D YR  M+     D  + +        + + LKPMNCP H  
Sbjct: 315 VYSPHITKGNLFETSGHLDWYRDGMYPAMHLDAELNEDGTIRRPGQDYYLKPMNCPFHDL 374

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           +F    +SYRELP+R+ EFGSVYR E SG +HGL RVRG TQDDAH+FCT +Q+  E   
Sbjct: 375 IFRSRGRSYRELPLRMFEFGSVYRYEKSGVIHGLTRVRGMTQDDAHIFCTLDQVQEELKS 434

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
           +   ++ + +D+G +   ++LSTR ++  VGSD LW+ A   ++   +         +  
Sbjct: 435 LLAFVLGLLRDYGLDDFYLELSTRNDEKYVGSDELWETATETLRVAAEDSG------LEL 488

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
               G  AFYGPK     KDA+GR WQ  TIQ+DFNLP RF   Y      +  PVMIHR
Sbjct: 489 VPDPGGAAFYGPKISVQAKDALGRTWQMSTIQLDFNLPERFELEYTGPDGSRQRPVMIHR 548

Query: 526 AVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD 585
           A+FGSIERF G++ E++ G  P WL+P+Q +   I     ++   +A  LK H + +E D
Sbjct: 549 ALFGSIERFFGVLTEHYAGAFPAWLAPVQVVGIPIADEHADHLFAVAKELKKHGVRVEID 608

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             ++ +  KIR H+ +K+P +++ G K+    ++  R    T    V +  A+  + 
Sbjct: 609 ASDDRMQKKIRNHTTQKVPFMLLAGGKDVESGAVSFRFRDGTQINGVPVEQAVATVV 665


>gi|316976611|gb|EFV59868.1| threonyl-tRNA synthetase, cytoplasmic [Trichinella spiralis]
          Length = 1190

 Score =  554 bits (1428), Expect = e-155,   Method: Composition-based stats.
 Identities = 212/639 (33%), Positives = 333/639 (52%), Gaps = 47/639 (7%)

Query: 2   PSDIKLTFPDGSIKN-FPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSI 59
              I +T PDG          +  D+   +  ++  + +   ++G + DL  P+ +  ++
Sbjct: 55  SEPITVTLPDGKEVEAMAWRTSPLDIMTKL--NMGGRPIVSKVDGVLWDLERPLEKSCNL 112

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF-DKEQPFSSDE 118
           + +  +D     V  HS AH++ EA + ++    +  GP IE+GFYYD    ++  ++++
Sbjct: 113 QFLLFDDDEGKQVFWHSTAHVLGEAAERLF-GCCLCYGPPIENGFYYDMFMDDRTVTAED 171

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           + ++ K M+  I    PF +  L  E+  E+F+     +K+ ILE+       T YR G 
Sbjct: 172 MDKLAKIMKAAIDGKQPFERLELKKEELMEMFKY--NPFKLRILENKVKTPTTTAYRCGP 229

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLCRGPHVR TG +  F K+ K +  +W GDS+   L R+YG ++   ++L  +    
Sbjct: 230 LIDLCRGPHVRHTGLLNSF-KITKNSSTFWEGDSSMESLQRVYGVSFPNSKQLKLWEKMR 288

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
           EE+  RDHRKL R+ +LF   E   G  F+  +G  I+ TL+ ++R++ +   + E+ TP
Sbjct: 289 EEAASRDHRKLGRQQELFIFHELSPGSAFFFPRGAYIYNTLVEFLRKQYRKRGFREVITP 348

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  LW+ SGHW  Y  NMF ++       +   F LKPMNCPGH  +          
Sbjct: 349 NIYNSRLWETSGHWQHYAKNMFKIEI------EKELFGLKPMNCPGHCLI---------- 392

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
                        NE SG+L GL RVR F QDDAH+FC ++Q+ +E     + +  +Y+ 
Sbjct: 393 -------------NELSGALSGLTRVRRFQQDDAHIFCRQDQIASEIEGCLDFLRFVYET 439

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
            GF  + + LSTRP+  +G    WD+AE  ++  L+  K      +   +  G+GAFYGP
Sbjct: 440 LGF-SMKLYLSTRPDDFMGDVKTWDEAEAQLQCALEKFK------LPWTLNAGDGAFYGP 492

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K + I+ DA+ R  QC TIQ+DF LP RF+  YV+ +  K  PV+IHRAV GSIER I +
Sbjct: 493 KIDIIVLDAMQRQHQCATIQLDFQLPVRFDLHYVDENHVKQRPVIIHRAVLGSIERMIAV 552

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FRNETINYKIR 596
           + ENF G  P WLSP QA+V  +     +YA ++   +       + D   ++T+  KIR
Sbjct: 553 LTENFAGKWPFWLSPRQAMVIPVHPEFDDYALQVQQKIFDAGFECDVDVDASDTMKKKIR 612

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
              + K   I++ G KE    S+ IR   +    + SL 
Sbjct: 613 NAQLGKWNFILVVGAKEKENSSVNIRTRDNAVLGEYSLE 651


>gi|322697146|gb|EFY88929.1| threonyl-tRNA synthetase, putative [Metarhizium acridum CQMa 102]
          Length = 759

 Score =  554 bits (1428), Expect = e-155,   Method: Composition-based stats.
 Identities = 230/705 (32%), Positives = 362/705 (51%), Gaps = 74/705 (10%)

Query: 3   SDIKLTF---PDG--SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-E 56
           + I ++    PD    I       T   + + +++ +A +AV   +NG+V DL+ P+  +
Sbjct: 54  NPITVSLTAGPDNITEISATAWETTPGQLLKHVAKVIASEAVVAKVNGEVWDLTRPLEAD 113

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ--PF 114
            ++  ++ +DP   AV  HS AH++ EA +  +    ++ GP    GF+YD    +    
Sbjct: 114 CAVSYLSSKDPEGRAVFWHSAAHVLGEACEHQF-GCMLSHGPPTNMGFFYDMAMREGDAV 172

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES-IPAKENVTL 173
              +   +E   ++      PF +  ++ E  R+LF   K  YK+  +E  +P   + T+
Sbjct: 173 KETDRPALEALAKKFFKEKQPFERVEIAKEDLRKLFGYSK--YKMHYIEKFVPDGGSTTV 230

Query: 174 YRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQ 233
           YR G   DLC GPH+++T Q+  F K+M  + AY+ GD     L RI G A+    ++ +
Sbjct: 231 YRNGSLVDLCTGPHIQNTKQISAF-KIMGNSSAYFLGDQANDSLQRISGVAFPKNDQMKE 289

Query: 234 YLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYE 292
           +L +LEE++KRDH+ + +   LF  +    G  F+   G +IF  + + +R +     Y+
Sbjct: 290 WLTYLEEAKKRDHQLIGKNQKLFWFSPLSPGSPFFLPHGTRIFNAIQAMLREQYWMRGYD 349

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT------------------------- 327
           E+++P + D  LW+ SGHWD Y+ +MF V                               
Sbjct: 350 EVHSPLMYDAQLWKTSGHWDHYQEDMFRVPLKHTHGAAPDASAASGPDASKDANKPADKD 409

Query: 328 --------IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHG 379
                   ++  R FALKPMNCPGH  +F    +SYR LP R+A+F  ++RNE SG+L G
Sbjct: 410 GENAEVAKLEQERLFALKPMNCPGHALMFASEERSYRSLPWRVADFSVLHRNEASGALTG 469

Query: 380 LMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDA 439
           L RVR F QDDAH+FCT +Q+ +E   +   +  +Y  FGF    +KLSTRP+  +G  +
Sbjct: 470 LTRVRKFQQDDAHIFCTIDQVTDELRGLFKFMTHVYTMFGF-PFKLKLSTRPDSYMGKLS 528

Query: 440 LWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVD 499
            WD AE+ +K  L   K       +  +  G+GAFYGPK +  + DA+GR++QC TIQ+D
Sbjct: 529 DWDAAEDRLKKALQEFKGD-----DWVINPGDGAFYGPKIDVTVHDALGREFQCATIQLD 583

Query: 500 FNLPSRFNAFYVNSHSE-----------------KCHPVMIHRAVFGSIERFIGIMIENF 542
           F LP  FN  Y  + S                     PVMIHRAV GS ERF+GI+IE+F
Sbjct: 584 FQLPQNFNLLYRTNESTADRAKGEGEEEGDIPSGMARPVMIHRAVIGSFERFMGILIEHF 643

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WLSP Q +V  I   A +YA+E+ ++L    L  + D    T+  KIR   + +
Sbjct: 644 AGKWPFWLSPRQVMVIPIMKDAEDYAREVRDILHDAKLYADVDVSGNTLQKKIRAAQLAQ 703

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQK----VSLLDAIPILTK 643
              +++ G +E  +R++ IR     ++Q+    + L D +  L +
Sbjct: 704 YNFVMVVGAEEIEKRAVNIRNRDDPSSQQKGAMIDLDDVVKRLVE 748


>gi|330466868|ref|YP_004404611.1| threonyl-tRNA synthetase [Verrucosispora maris AB-18-032]
 gi|328809839|gb|AEB44011.1| threonyl-tRNA synthetase [Verrucosispora maris AB-18-032]
          Length = 666

 Score =  554 bits (1427), Expect = e-155,   Method: Composition-based stats.
 Identities = 248/634 (39%), Positives = 359/634 (56%), Gaps = 38/634 (5%)

Query: 29  SISRSLAKKAVAVAI-NGKVCDLS-DPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQ 86
            +  S  K  V V    G + DL   P  E  +E +  + P  L V+RHS AH++A+AVQ
Sbjct: 29  ELPTSGPKAIVVVRDPQGVLRDLDWRPAEETVVEPVALDSPDGLNVLRHSTAHVLAQAVQ 88

Query: 87  SIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYL-SHEK 145
            I+PE ++ IGP IE+GFYYDF  ++PF  D+LA++EK+MQEII     F ++   S ++
Sbjct: 89  DIFPEAKLGIGPPIENGFYYDFAVDKPFQPDDLAKLEKRMQEIIKSGQRFRRRRFDSLDE 148

Query: 146 ARELFESKKEAYKVEILESIPAK-----------ENVTLYRQ-------GEWFDLCRGPH 187
           A+   E   E +K+E+++                  +T+Y           W DLCRGPH
Sbjct: 149 AK--VELAAEPFKLELIDVKGEGLDSSEVMEVGGGELTIYDNLAATEDKVCWSDLCRGPH 206

Query: 188 VRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHR 247
           + +T  +  F KLM+ A AYWRG    P L R+YGTAW T+ EL  YL  LEE+ +RDHR
Sbjct: 207 LPNTRLIGAF-KLMRSAAAYWRGSERNPQLQRVYGTAWPTRDELKAYLKLLEEAARRDHR 265

Query: 248 KLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLW 305
           KL  ++DLF   ++ GSG+  +H KG  I + + +Y R +  +  YE +NTP +   HL+
Sbjct: 266 KLGVDLDLFSFPDELGSGLAVFHPKGGIIRREMENYSRLKHEQAGYEFVNTPHITKGHLY 325

Query: 306 QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEF 365
           + SGH D Y   MF          +  ++ LKPMNCP H  +F    +SYRELP+R+ EF
Sbjct: 326 EVSGHLDWYADGMFPPMEV-----EGASYYLKPMNCPMHDLIFRSRGRSYRELPLRMFEF 380

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
           G+VYR E SG +HGL RVRG TQDDAH+FCT+EQM  E   +   ++ + +D+G +   +
Sbjct: 381 GTVYRYEKSGVVHGLTRVRGMTQDDAHIFCTEEQMAGELKSLLAFVLELLRDYGLDDFYL 440

Query: 426 KLSTRPEKR-VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +LSTR  ++ VG+D  W+ A   ++   +      +  +      G  AFYGPK    +K
Sbjct: 441 ELSTRNPEKSVGTDENWERATEALRSAAE------ESGLTLVPDPGGAAFYGPKISVQVK 494

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           DAIGR WQ  TIQVDFNLP RFN  Y  +   +  PVMIHRA+FGSIERF G++ E++ G
Sbjct: 495 DAIGRTWQMSTIQVDFNLPERFNLEYQAADGTRQRPVMIHRALFGSIERFFGVLTEHYAG 554

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P WL+P+Q +   I     +Y       L++  +  + D  +E +  KIR    +KIP
Sbjct: 555 AFPAWLAPVQVVGIPIRDDHADYLHGFVAALRAEGIRAQVDSGDERMQKKIRNAQQQKIP 614

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
            ++I GD + +  ++  R    +    V L +A+
Sbjct: 615 FMVIAGDDDVAAGTVSFRYRDGSQRNGVPLAEAV 648


>gi|84496326|ref|ZP_00995180.1| threonyl-tRNA synthetase [Janibacter sp. HTCC2649]
 gi|84383094|gb|EAP98975.1| threonyl-tRNA synthetase [Janibacter sp. HTCC2649]
          Length = 661

 Score =  554 bits (1427), Expect = e-155,   Method: Composition-based stats.
 Identities = 245/670 (36%), Positives = 366/670 (54%), Gaps = 48/670 (7%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SI 59
           M S I +    G  ++  +  T +D+         +  +   +NG++ DL+  + +G ++
Sbjct: 1   MSSQITVHVA-GDERSVDLETTAADLFRD-----DRNVLVARVNGELRDLAHVLADGDTV 54

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           E +T ++   L V+RHS AH++A+AVQ + P+ ++ IGP + DGFYYDFD  +PF  D+L
Sbjct: 55  EPVTAQEQDGLDVLRHSAAHVLAQAVQQLKPDAKLGIGPPVRDGFYYDFDVAEPFQPDDL 114

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL----------------- 162
             +EK MQ+II     F+++ +S + A  L E K E YK E++                 
Sbjct: 115 KALEKSMQKIINEGQTFVRREISDDDA--LVELKDEPYKCELIGLKGGSASEAADGADVE 172

Query: 163 ---ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSR 219
                +   +NV       W DLCRGPHV ST  +   FK+M+ A AYWRG    P L R
Sbjct: 173 VGGAQLTIYDNVRRDGTKAWGDLCRGPHVPSTKVLGNAFKVMRSAAAYWRGSEKNPQLQR 232

Query: 220 IYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQT 278
           +YGTAW T++EL  +L  L E+EKRDHRKL  E+DLF   ++ GSG+  +H KG  I + 
Sbjct: 233 VYGTAWPTKEELRAHLERLAEAEKRDHRKLGAELDLFSFPDELGSGLPVFHPKGGVIKRE 292

Query: 279 LISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALK 337
           +  Y+RR  I++ ++ + TP +    L+  SGH   Y   MF          +   + LK
Sbjct: 293 MEDYVRRRHIEEGFDYVGTPHISKDGLFHTSGHLPYYADTMFPPMEF-----EGSKYQLK 347

Query: 338 PMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK 397
            MNCP H  +F+   +SYRELP+R  EFGSVYR E SG +HGL RVRG TQDD+H + T 
Sbjct: 348 AMNCPMHNLIFSSRGRSYRELPLRFFEFGSVYRYEKSGVVHGLTRVRGMTQDDSHSYVTA 407

Query: 398 EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK------RVGSDALWDDAENIMKGV 451
           EQ   E   + + ++S+ +DFG E   ++LSTR  +       +GSD  W+ A ++++ V
Sbjct: 408 EQAPAEIKHLLDFVLSLLRDFGLEDFYLELSTRDTEGEKSAKFIGSDEQWEVATSVLEKV 467

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
                 ++   +      G  AFYGPK     +DAIGR WQ  TIQ DFN P RF   Y 
Sbjct: 468 ------ATDSGLELVADPGGAAFYGPKISVQARDAIGRTWQMSTIQYDFNQPERFGLEYQ 521

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
            S   +  PVMIH A FGSIERF G+++E++ G  P+WLSP+Q +   +     +Y  ++
Sbjct: 522 ASDGSRQQPVMIHSAKFGSIERFFGVLVEHYAGAFPVWLSPVQVLGLPVADEYNDYLWDV 581

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
            + +K+  + +E D  ++    KIR  S  K+P  +I G+ + S  ++  R    +    
Sbjct: 582 LSQMKAKGIRVELDDSDDRFPKKIRNASKAKVPFALIAGEDDRSNNAVSFRYRDGSQKNG 641

Query: 632 VSLLDAIPIL 641
           V + DAI  +
Sbjct: 642 VPIEDAIAEV 651


>gi|296454199|ref|YP_003661342.1| threonyl-tRNA synthetase [Bifidobacterium longum subsp. longum
           JDM301]
 gi|296183630|gb|ADH00512.1| threonyl-tRNA synthetase [Bifidobacterium longum subsp. longum
           JDM301]
          Length = 677

 Score =  554 bits (1427), Expect = e-155,   Method: Composition-based stats.
 Identities = 243/667 (36%), Positives = 364/667 (54%), Gaps = 43/667 (6%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           + I +T  +G  K      TG ++         K  +AV ING+  DL  P+ EG +++ 
Sbjct: 4   ATISITV-NGEAKEVEATTTGVELFAE-----DKNIIAVKINGENRDLYTPLNEGDTVDP 57

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           I  +    LA++RHS  H+MA+AVQ ++P  ++ +GP+I+DGFYYDF  +QPF+ D+L  
Sbjct: 58  IALDSEDGLAIMRHSATHVMAQAVQEVYPNAKLGVGPVIKDGFYYDFQVDQPFTPDDLKD 117

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPA-----------KEN 170
           IEK+MQ II     F ++ ++ E+A +  E   + +K+E++E   A           ++ 
Sbjct: 118 IEKRMQRIIKSSQSFRRRSVTEEEALK--EEADQPFKIELIEDKEAHLDPAAATEISEKE 175

Query: 171 VTLYRQGE------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTA 224
           ++ Y   +      W DLCRGPH+ +T  +K F K+ + A AYWRG    P + RIYGTA
Sbjct: 176 LSFYDNVDRDGNVVWKDLCRGPHLPNTRYIKAF-KIERSAAAYWRGSEKNPTMQRIYGTA 234

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM 283
           W T+++L  Y   LEE+ KRDHRKL  EMDLF   ++ G G+  +H KG  +   +  Y 
Sbjct: 235 WATKEDLKAYQTRLEEAAKRDHRKLGAEMDLFSFPDEIGPGLAVFHPKGAAVINAMEDYS 294

Query: 284 RR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT-------IKDLRTFA 335
           R    K  Y  + TP +    L++ SGH   Y+  M+     D+         K    + 
Sbjct: 295 REMHRKHHYSFVQTPHITKGGLYETSGHLHWYKDGMYPPMHLDEEKDADGNITKPGADYY 354

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC 395
           LKPMNCP H  +F    +SYRELP+RL EFG+VYR E SG +HGL RVRG TQDD+H++C
Sbjct: 355 LKPMNCPMHNLIFKSRQRSYRELPLRLFEFGTVYRYEKSGEVHGLTRVRGLTQDDSHIYC 414

Query: 396 TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDT 454
           T+EQM +E   +   ++++ KDFG     ++LST+     VGSD +W++A N +  V   
Sbjct: 415 TREQMKDELTSLLTFVLNLLKDFGLTDFYLELSTKDPNKYVGSDEIWEEATNTLAEVAK- 473

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH 514
                +  +         AFYGPK     +DAIGR WQ  TIQ+DFNLP RF   Y+   
Sbjct: 474 -----ESNLELVDDPCGAAFYGPKISVQARDAIGRTWQVSTIQLDFNLPERFQLEYIAKD 528

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANL 574
                PVMIHRA+FGSIERF  +++E++ G  P WL+P+Q +   +      +       
Sbjct: 529 GTHQRPVMIHRALFGSIERFFAVLLEHYAGAFPAWLAPVQVLGVPVADEFAPHLAGFVKS 588

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           L+   +  E D+ ++    KIR  S  K+P I+I G+++ +  ++  R    +    V +
Sbjct: 589 LEDEMVRCEIDYSDDRFGKKIRNASKSKVPFILIVGEEDMNNNAVSFRFRDGSQLNGVPV 648

Query: 635 LDAIPIL 641
             A   +
Sbjct: 649 DKAREQI 655


>gi|239621470|ref|ZP_04664501.1| threonyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
           CCUG 52486]
 gi|239515931|gb|EEQ55798.1| threonyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
           CCUG 52486]
          Length = 686

 Score =  554 bits (1427), Expect = e-155,   Method: Composition-based stats.
 Identities = 240/667 (35%), Positives = 364/667 (54%), Gaps = 43/667 (6%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           + I +T  +G  K      TG ++         K  +AV ING+  DL  P+ +G +++ 
Sbjct: 13  ATISITV-NGEAKEVEATTTGVELFAE-----DKNIIAVKINGENRDLYTPLNDGDTVDP 66

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           I  +    LA++RHS  H+MA+AVQ ++P  ++ +GP+I+DGFYYDF  +QPF+ ++L  
Sbjct: 67  IALDSEDGLAIMRHSATHVMAQAVQEVYPNAKLGVGPVIKDGFYYDFQVDQPFTPNDLKD 126

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPA-----------KEN 170
           IEK+MQ II     F ++ ++ E+A +  E   + +K+E++E   A           ++ 
Sbjct: 127 IEKRMQRIIKSSQSFRRRSVTEEEALK--EEADQPFKIELIEDKEAHLDPAAATEISEKE 184

Query: 171 VTLYRQGE------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTA 224
           ++ Y   +      W DLCRGPH+ +T  +K F K+ + A AYWRG    P + R+YGTA
Sbjct: 185 LSFYDNVDRDGNVVWKDLCRGPHLPNTRYIKAF-KIERSAAAYWRGSEKNPTMQRVYGTA 243

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM 283
           W T+++L  Y   LEE+ KRDHRKL  EMDLF   ++ G G+  +H KG  +   +  Y 
Sbjct: 244 WATKEDLKAYQTRLEEAAKRDHRKLGAEMDLFSFPDEIGPGLAVFHPKGAAVINAMEDYS 303

Query: 284 RR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT-------IKDLRTFA 335
           R    K  Y  + TP +    L++ SGH   Y+  M+     D+         K    + 
Sbjct: 304 REMHRKHHYSFVQTPHITKGGLYETSGHLHWYKDGMYPPMHLDEEKDADGNITKPGADYY 363

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC 395
           LKPMNCP H  +F    +SYRELP+RL EFG+VYR E SG +HGL RVRG TQDD+H++C
Sbjct: 364 LKPMNCPMHNLIFKSRQRSYRELPLRLFEFGTVYRYEKSGEVHGLTRVRGLTQDDSHIYC 423

Query: 396 TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDT 454
           T+EQM +E   +   ++++ KDFG     ++LST+     VGSD +W++A N +  V   
Sbjct: 424 TREQMKDELTSLLTFVLNLLKDFGLTDFYLELSTKDPNKYVGSDEIWEEATNTLAEVAK- 482

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH 514
                +  +         AFYGPK     +DAIGR WQ  TIQ+DFNLP RF   Y+   
Sbjct: 483 -----ESNLELVDDPCGAAFYGPKISVQARDAIGRTWQVSTIQLDFNLPERFQLEYIAKD 537

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANL 574
                PVMIHRA+FGSIERF  +++E++ G  P WL+P+Q +   +      +       
Sbjct: 538 GTHQRPVMIHRALFGSIERFFAVLLEHYAGAFPAWLAPVQVLGVPVADEFAPHLAGFVKS 597

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           L+   +  E D+ ++    KIR  S  K+P I+I G+++ +  ++  R    +    V +
Sbjct: 598 LEDEMVRCEIDYSDDRFGKKIRNASKSKVPFILIVGEEDMNNNAVSFRFRDGSQLNGVPV 657

Query: 635 LDAIPIL 641
             A   +
Sbjct: 658 DTAREQI 664


>gi|41408814|ref|NP_961650.1| threonyl-tRNA synthetase [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|73919807|sp|Q73WE4|SYT_MYCPA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|41397173|gb|AAS05033.1| ThrS [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 684

 Score =  554 bits (1426), Expect = e-155,   Method: Composition-based stats.
 Identities = 246/671 (36%), Positives = 366/671 (54%), Gaps = 45/671 (6%)

Query: 17  FPVHATGSDVAESIS---RSLAKKAVAVA-INGKVCDLSD-PVREGSIEIITPEDPRSLA 71
            P   T +          R      V V   +G + DLS  P  +  +  +        +
Sbjct: 15  VPAGTTAAAAVRDAGLPGRGAPDAVVVVRDASGTLRDLSWVPDTDAEVVPVAANTDEGRS 74

Query: 72  VIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIA 131
           VIRHS AH++A+AVQ ++P+ ++ IGP I DGFYYDFD  +PF+ ++L ++EK+M++I+ 
Sbjct: 75  VIRHSAAHVLAQAVQELFPQAKLGIGPPITDGFYYDFDVPEPFTPEDLDKLEKRMRQIVK 134

Query: 132 RDSPFLKQYL-SHEKARELFESKKEAYKVEILESIPAKENV--------TLY-------R 175
               F ++   S E+AR   E   E YK+E+++      ++        T Y       R
Sbjct: 135 EGQLFSRRVYESKEQARA--ELAGEPYKLELVDDKSGDPDIMEVGGDELTAYDNLNPRTR 192

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
           +  W DLCRGPH+ +T  +  F KL + + AYWRGD N   L RIYGTAW +Q+ L  +L
Sbjct: 193 ERVWGDLCRGPHIPTTRHIPAF-KLTRSSAAYWRGDQNNASLQRIYGTAWESQEALDDHL 251

Query: 236 YFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEE 293
             +EE+++RDHRKL  E+DLF   ++ GSG+  +H +G  + + L  Y RRK  +  YE 
Sbjct: 252 RLIEEAQRRDHRKLGSELDLFSFPDEIGSGLAVFHPRGGVVRRELEEYSRRKHIEAGYEF 311

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD-------LRTFALKPMNCPGHVA 346
           +NTP +    L+  SGH D Y   MF     D    D        + + LKPMNCP H  
Sbjct: 312 VNTPHITKAQLFHTSGHLDWYADGMFPPMHLDAEYDDDGTVRKPGQDYYLKPMNCPMHTL 371

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           ++    +SYRELP+RL EFG+VYR E SG +HGL R RGFT DD+H+FCT+EQ+  E   
Sbjct: 372 IYRSRGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTMDDSHIFCTREQLHGELAS 431

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
           +   ++ +  D+G     ++LST+     VGSD +W+ A   +  V      +++  +  
Sbjct: 432 LLRFVLELLGDYGLTDFYLELSTKDPDKFVGSDEVWEQATTSLADV------AAESGLEL 485

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
               G  AFYGPK     +DA+GR WQ  TIQVDFN P RF   Y  S   +  PVMIHR
Sbjct: 486 VPDPGGAAFYGPKISVQARDALGRSWQMSTIQVDFNFPERFELEYTASDGTRQRPVMIHR 545

Query: 526 AVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD 585
           A+FGSIERF GI+ E++ G  P WL+P+QA+   +    V Y + +A  LKS+ + +E D
Sbjct: 546 ALFGSIERFFGILTEHYAGAFPAWLAPVQAVGIPVADEHVPYLESVAAQLKSYGVRVEVD 605

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK-- 643
             ++ +  KI  H+ +K+P +++ GD++ +  ++  R    T    V    A+  + K  
Sbjct: 606 ASDDRMAKKIVHHTAQKVPFMLLAGDRDVAAGAVSFRFGDRTQINGVPRDSAVDAIVKWI 665

Query: 644 ---ESLPPDCQ 651
              E+  P  +
Sbjct: 666 ADRENSVPSAE 676


>gi|209879794|ref|XP_002141337.1| threonyl-tRNA synthetase family protein [Cryptosporidium muris
           RN66]
 gi|209556943|gb|EEA06988.1| threonyl-tRNA synthetase family protein [Cryptosporidium muris
           RN66]
          Length = 743

 Score =  554 bits (1426), Expect = e-155,   Method: Composition-based stats.
 Identities = 234/693 (33%), Positives = 369/693 (53%), Gaps = 70/693 (10%)

Query: 3   SDIKLTFPDGSIKN-FPVHATGSDVAESISRSLAKKAVAVAI------------------ 43
             I +T  DGSI++      +  D+A++IS+ L ++ +   I                  
Sbjct: 58  DPISITLADGSIRSGIRFLTSPMDIAKTISKRLVEECIVANIRYITPIESNISVIETDFE 117

Query: 44  -----------NG-KVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWP 90
                       G K+ D++ P+  +  ++++  +   + +V  HS AHI+ + +++ + 
Sbjct: 118 ECLTSNYDKDIQGWKLWDMTRPLETDCELKLLKFDTLEAKSVFWHSSAHILGQCMENEF- 176

Query: 91  EVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKAREL 149
              + IGP +  GFYYD +      S D+   IE+  +++I+    F +   S E+A EL
Sbjct: 177 GSLLTIGPALSPGFYYDSYMGNNSVSKDDYPIIEQCAKKVISEKQSFERLVCSKEEALEL 236

Query: 150 FESKKEAYKVEILES-IPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYW 208
              +   +K+ ++ S +P     T+YR G + DLC GPHV  TG +K F K+ K +   W
Sbjct: 237 --FQDNPFKLSLISSKVPENGKTTVYRCGNFIDLCMGPHVPHTGIIKAF-KITKNSACNW 293

Query: 209 RGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGS-GVIF 267
            G +    L R+YG ++  ++ L  Y+ FLEE +KRDHR +   ++LF    + S G  F
Sbjct: 294 LGCTENDSLQRVYGISYPDKKSLDDYIEFLEEVKKRDHRVIGSNLNLFFFDTNASVGSCF 353

Query: 268 WHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADD 326
           W   G +I+  +I ++R + +   +EE+ TP +    LW+ SGH+ +Y+ NMF  +    
Sbjct: 354 WLPPGARIYNKMIEFIRSEYRIRGFEEVVTPNIFSCDLWKTSGHYFAYKENMFLFEV--- 410

Query: 327 TIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
              + + + LKPMNCPGH  +F H   SY++LP+R+A+FG ++RNE SG+L+GL RVR F
Sbjct: 411 ---EKKEWGLKPMNCPGHCIIFRHMNPSYKQLPIRMADFGVLHRNELSGALNGLTRVRRF 467

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
            QDDAH+FCT EQ+ +E       +  +Y   GF   +  L T P++ +G+   W+DAEN
Sbjct: 468 QQDDAHIFCTAEQIQSEVFAALEFLFFVYDKLGFSFNL-YLGTMPKEHLGTREKWEDAEN 526

Query: 447 IMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF 506
            +K  L+      +      V  G+GAFYGPK + +L DA+ R  QCGTIQ+DF LP RF
Sbjct: 527 SLKLALNRTGYQWK------VNEGDGAFYGPKIDIMLWDALKRPHQCGTIQLDFQLPIRF 580

Query: 507 NAFYVNSHS----------------EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL 550
           N  Y +  +                    PV+IHRA+ GSIER + +++EN  G LP WL
Sbjct: 581 NLQYRSDDNILTEGGDHNLDEELKPGYKRPVIIHRAILGSIERMVAVILENTGGKLPFWL 640

Query: 551 SPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           SP QAIV  I+  + +YA+ I + L      +  D+ + TIN KIRE  + +   ++I G
Sbjct: 641 SPRQAIVLPISEKSHDYAKSIESELCCMGYDVGADYSSSTINRKIREAQLLQWNFMLIVG 700

Query: 611 DKEASERSIGIRRFGSTTTQ-KVSLLDAIPILT 642
           + EA   SI +R   S+T+Q  + L D I    
Sbjct: 701 ENEAKSGSITVRSRDSSTSQRNMILSDLIAEFK 733


>gi|23465302|ref|NP_695905.1| threonyl-tRNA synthetase [Bifidobacterium longum NCC2705]
 gi|227547263|ref|ZP_03977312.1| threonyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
           ATCC 55813]
 gi|317483234|ref|ZP_07942229.1| threonyl-tRNA synthetase [Bifidobacterium sp. 12_1_47BFAA]
 gi|73919773|sp|Q8G6C2|SYT_BIFLO RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|23325940|gb|AAN24541.1| threonyl-tRNA synthetase [Bifidobacterium longum NCC2705]
 gi|227212222|gb|EEI80118.1| threonyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
           ATCC 55813]
 gi|316915303|gb|EFV36730.1| threonyl-tRNA synthetase [Bifidobacterium sp. 12_1_47BFAA]
          Length = 677

 Score =  554 bits (1426), Expect = e-155,   Method: Composition-based stats.
 Identities = 240/667 (35%), Positives = 364/667 (54%), Gaps = 43/667 (6%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           + I +T  +G  K      TG ++         K  +AV ING+  DL  P+ +G +++ 
Sbjct: 4   ATISITV-NGEAKEVEATTTGVELFAE-----DKNIIAVKINGENRDLYTPLNDGDTVDP 57

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           I  +    LA++RHS  H+MA+AVQ ++P  ++ +GP+I+DGFYYDF  +QPF+ ++L  
Sbjct: 58  IALDSEDGLAIMRHSATHVMAQAVQEVYPNAKLGVGPVIKDGFYYDFQVDQPFTPNDLKD 117

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPA-----------KEN 170
           IEK+MQ II     F ++ ++ E+A +  E   + +K+E++E   A           ++ 
Sbjct: 118 IEKRMQRIIKSSQSFRRRSVTEEEALK--EEADQPFKIELIEDKEAHLDPAAATEISEKE 175

Query: 171 VTLYRQGE------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTA 224
           ++ Y   +      W DLCRGPH+ +T  +K F K+ + A AYWRG    P + R+YGTA
Sbjct: 176 LSFYDNVDRDGNVVWKDLCRGPHLPNTRYIKAF-KIERSAAAYWRGSEKNPTMQRVYGTA 234

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM 283
           W T+++L  Y   LEE+ KRDHRKL  EMDLF   ++ G G+  +H KG  +   +  Y 
Sbjct: 235 WATKEDLKAYQTRLEEAAKRDHRKLGAEMDLFSFPDEIGPGLAVFHPKGAAVINAMEDYS 294

Query: 284 RR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT-------IKDLRTFA 335
           R    K  Y  + TP +    L++ SGH   Y+  M+     D+         K    + 
Sbjct: 295 REMHRKHHYSFVQTPHITKGGLYETSGHLHWYKDGMYPPMHLDEEKDADGNITKPGADYY 354

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC 395
           LKPMNCP H  +F    +SYRELP+RL EFG+VYR E SG +HGL RVRG TQDD+H++C
Sbjct: 355 LKPMNCPMHNLIFKSRQRSYRELPLRLFEFGTVYRYEKSGEVHGLTRVRGLTQDDSHIYC 414

Query: 396 TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDT 454
           T+EQM +E   +   ++++ KDFG     ++LST+     VGSD +W++A N +  V   
Sbjct: 415 TREQMKDELTSLLTFVLNLLKDFGLTDFYLELSTKDPNKYVGSDEIWEEATNTLAEVAK- 473

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH 514
                +  +         AFYGPK     +DAIGR WQ  TIQ+DFNLP RF   Y+   
Sbjct: 474 -----ESNLELVDDPCGAAFYGPKISVQARDAIGRTWQVSTIQLDFNLPERFQLEYIAKD 528

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANL 574
                PVMIHRA+FGSIERF  +++E++ G  P WL+P+Q +   +      +       
Sbjct: 529 GTHQRPVMIHRALFGSIERFFAVLLEHYAGAFPAWLAPVQVLGVPVADEFAPHLAGFVKS 588

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           L+   +  E D+ ++    KIR  S  K+P I+I G+++ +  ++  R    +    V +
Sbjct: 589 LEDEMVRCEIDYSDDRFGKKIRNASKSKVPFILIVGEEDMNNNAVSFRFRDGSQLNGVPV 648

Query: 635 LDAIPIL 641
             A   +
Sbjct: 649 DTAREQI 655


>gi|322691278|ref|YP_004220848.1| threonyl-tRNA synthase [Bifidobacterium longum subsp. longum JCM
           1217]
 gi|320456134|dbj|BAJ66756.1| threonyl-tRNA synthase [Bifidobacterium longum subsp. longum JCM
           1217]
          Length = 677

 Score =  554 bits (1426), Expect = e-155,   Method: Composition-based stats.
 Identities = 240/667 (35%), Positives = 364/667 (54%), Gaps = 43/667 (6%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           + I +T  +G  K      TG ++         K  +AV ING+  DL  P+ +G +++ 
Sbjct: 4   ATISITV-NGEAKEVEATTTGVELFAE-----DKNIIAVKINGENRDLYTPLNDGDTVDP 57

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           I  +    LA++RHS  H+MA+AVQ ++P  ++ +GP+I+DGFYYDF  +QPF+ ++L  
Sbjct: 58  IALDSEDGLAIMRHSATHVMAQAVQEVYPNAKLGVGPVIKDGFYYDFQVDQPFTPNDLKD 117

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPA-----------KEN 170
           IEK+MQ II     F ++ ++ E+A +  E   + +K+E++E   A           ++ 
Sbjct: 118 IEKRMQRIIKSSQSFRRRSVTEEEALK--EEADQPFKIELIEDKEAHLDPAAATEISEKE 175

Query: 171 VTLYRQGE------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTA 224
           ++ Y   +      W DLCRGPH+ +T  +K F K+ + A AYWRG    P + R+YGTA
Sbjct: 176 LSFYDNVDRDGNVVWKDLCRGPHLPNTRYIKAF-KIERSAAAYWRGSEKNPTMQRVYGTA 234

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM 283
           W T+++L  Y   LEE+ KRDHRKL  EMDLF   ++ G G+  +H KG  +   +  Y 
Sbjct: 235 WATKEDLKAYQTRLEEAAKRDHRKLGAEMDLFSFPDEIGPGLAVFHPKGAAVINAMEDYS 294

Query: 284 RR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT-------IKDLRTFA 335
           R    K  Y  + TP +    L++ SGH   Y+  M+     D+         K    + 
Sbjct: 295 REMHRKHHYSFVQTPHITKGGLYETSGHLHWYKDGMYPPMHLDEEKDVDGNITKPGADYY 354

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC 395
           LKPMNCP H  +F    +SYRELP+RL EFG+VYR E SG +HGL RVRG TQDD+H++C
Sbjct: 355 LKPMNCPMHNLIFKSRQRSYRELPLRLFEFGTVYRYEKSGEVHGLTRVRGLTQDDSHIYC 414

Query: 396 TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDT 454
           T+EQM +E   +   ++++ KDFG     ++LST+     VGSD +W++A N +  V   
Sbjct: 415 TREQMKDELTSLLTFVLNLLKDFGLTDFYLELSTKDPNKYVGSDEIWEEATNTLAEVAK- 473

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH 514
                +  +         AFYGPK     +DAIGR WQ  TIQ+DFNLP RF   Y+   
Sbjct: 474 -----ESNLELVDDPCGAAFYGPKISVQARDAIGRTWQVSTIQLDFNLPERFQLEYIAKD 528

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANL 574
                PVMIHRA+FGSIERF  +++E++ G  P WL+P+Q +   +      +       
Sbjct: 529 GTHQRPVMIHRALFGSIERFFAVLLEHYAGAFPAWLAPVQVLGVPVADEFAPHLAGFVKS 588

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           L+   +  E D+ ++    KIR  S  K+P I+I G+++ +  ++  R    +    V +
Sbjct: 589 LEDEMVRCEIDYSDDRFGKKIRNASKSKVPFILIVGEEDMNNNAVSFRFRDGSQLNGVPV 648

Query: 635 LDAIPIL 641
             A   +
Sbjct: 649 DTAREQI 655


>gi|152967010|ref|YP_001362794.1| threonyl-tRNA synthetase [Kineococcus radiotolerans SRS30216]
 gi|151361527|gb|ABS04530.1| threonyl-tRNA synthetase [Kineococcus radiotolerans SRS30216]
          Length = 656

 Score =  553 bits (1425), Expect = e-155,   Method: Composition-based stats.
 Identities = 235/658 (35%), Positives = 365/658 (55%), Gaps = 43/658 (6%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
           M + + +T   G+ +      T  ++         +  V   +NG++ DLS  + EG  +
Sbjct: 1   MSAQLSIT-RSGATQQVASGTTAGELFAE-----DRDVVVARVNGELRDLSHVLAEGDEV 54

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           E +       LAV+RHS AH+MA+AV+  +PE ++ IGP I DGFY+DFD E+PF+ ++L
Sbjct: 55  EGVPISSEDGLAVLRHSAAHVMAQAVKQHFPEARLGIGPPIRDGFYFDFDVERPFTPEDL 114

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-------------ESIP 166
             +EK MQ I+     F+++ +S ++AR   E   E YK+E++              +  
Sbjct: 115 KVVEKTMQRIVKEGQRFVRREVSDDEARA--EMADEPYKLELIGLKSSAGDAAEGASAEV 172

Query: 167 AKENVTLYRQGE------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRI 220
            +  +T+Y   +      + DLCRGPH+ +T  V   F L++ A AYWRG    P L RI
Sbjct: 173 GEGGLTIYDNLKRDDAVAFRDLCRGPHLPTTRLVGIGFSLLRSAAAYWRGSEKNPQLQRI 232

Query: 221 YGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTL 279
           YGTAW ++ EL  Y   + E+E+RDHR+L  E+DLF   ++ GSG++ +H KG  + + +
Sbjct: 233 YGTAWPSKDELKAYQERVAEAERRDHRRLGAELDLFSFPDEIGSGLVVFHPKGGVVKREM 292

Query: 280 ISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKP 338
             Y+RR  I++ +  + TP +    L++ SGH   Y   MF     +++      + LK 
Sbjct: 293 EDYVRRRHIEEGFSYVGTPHISKGGLFETSGHLPYYEDTMFPGMELENS-----KYYLKA 347

Query: 339 MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE 398
           MNCP H  +F    +SYRELP+R  EFGSVYR E SG +HGL RVRG TQDD+H + T+E
Sbjct: 348 MNCPMHNLIFRSRGRSYRELPLRFFEFGSVYRYEKSGVVHGLTRVRGLTQDDSHSYVTQE 407

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLSTR--PEKRVGSDALWDDAENIMKGVLDTIK 456
           Q   E   + + ++ + KDFG +   ++LSTR   EK +GSD  W  A  +++       
Sbjct: 408 QAPGEIKHLLDFVLGLLKDFGLDDYYLELSTRGDSEKFIGSDEEWARATEVLETA----- 462

Query: 457 NSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE 516
            + +  ++     G  AFYGPK     KDAIGR WQ  TIQ DFN P+RF   Y  +   
Sbjct: 463 -ARETGLDLVADPGGAAFYGPKISVQAKDAIGRTWQMSTIQYDFNQPARFELEYTAADGT 521

Query: 517 KCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLK 576
           K  PVMIH A FGS+ERF G+++E++ G  P WL+P+Q +   +  + V + Q++A  L+
Sbjct: 522 KQRPVMIHSAKFGSLERFFGVLVEHYAGAFPPWLAPVQVVGIPVADAHVPHLQDVAAALR 581

Query: 577 SHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           +  + +E D  ++ +  KIR  + +KIP ++I G ++    ++  R    +    V +
Sbjct: 582 AAGVRVEVDDTDDRMPKKIRTWTKQKIPFLLIAGAEDVENGAVSFRFRDGSQENGVPV 639


>gi|325120065|emb|CBZ55617.1| hypothetical protein NCLIV_060420 [Neospora caninum Liverpool]
          Length = 781

 Score =  553 bits (1425), Expect = e-155,   Method: Composition-based stats.
 Identities = 237/723 (32%), Positives = 366/723 (50%), Gaps = 96/723 (13%)

Query: 4   DIKLTFPDGSIKN-FPVHATGSDVAESISRSLAKKAVAVAI--------------NGK-- 46
           +I +  PDGS K+      +  D+A  IS+SLA  ++   +              + +  
Sbjct: 60  EISIELPDGSKKSGTAYETSPYDIALEISKSLADASLVAKVLYEPGVGTEAITAADDEEE 119

Query: 47  ----------------VCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIW 89
                           + D+  P+     ++++  +   +  V  HS AHI+ +A+++ +
Sbjct: 120 ECACGEHEESQDDKWILFDMRRPLEGSCKLQLLKFDSDEAKHVFWHSSAHILGQAIEATF 179

Query: 90  PEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE 148
              Q+ +GP + +GFYYD +      + +   ++E     +I  D PF +   S  +A E
Sbjct: 180 -GAQLTVGPALTNGFYYDAYMGNATVTEESYGRLEAAAANVIKADQPFCRLVCSKAEALE 238

Query: 149 LFESKKEAYKVEILES-IPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAY 207
           L       +KV+++ S IP   + T+YR G   DLCRGPHV STG+VK F    K +  Y
Sbjct: 239 L--FADNPFKVQLISSKIPEGGSTTVYRCGALVDLCRGPHVPSTGKVKAFQVT-KHSATY 295

Query: 208 WRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSG-VI 266
           W G  N   L R+YG ++  ++ L +YL  +EE++KRDHR L + + LF    + S    
Sbjct: 296 WLGRQNLDSLQRVYGVSFPDKKLLKEYLKLVEEAKKRDHRMLGQNLHLFFFDTNVSPGSC 355

Query: 267 FWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD 325
           FW   G K++  L ++MR + +   ++E+ +P +    LW+ SGH+ +Y+ NM+      
Sbjct: 356 FWLPDGAKVYNKLCAFMREEYRFRGFQEVISPNIFSCDLWKMSGHYQNYKENMYLFDV-- 413

Query: 326 DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRG 385
               + + + LKPMNCPGH  +F H   SYR+LP+RLA+FG ++RNE SGSL GL RVR 
Sbjct: 414 ----EGKEWGLKPMNCPGHCIMFKHLAPSYRQLPLRLADFGVLHRNELSGSLTGLTRVRR 469

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
           F QDDAH+FC  +Q+  E     N +  +Y  FGF    + LSTRP+K +G  +LWD AE
Sbjct: 470 FQQDDAHIFCRMDQVKQEVADALNFLFFVYDQFGF-SFELFLSTRPKKALGDRSLWDAAE 528

Query: 446 NIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSR 505
             +K  L+      Q      +  G+GAFYGPK +  L DA+ R  QCGTIQ+DF LP R
Sbjct: 529 GALKEALEETGRPWQ------LNPGDGAFYGPKIDIRLWDALKRPHQCGTIQLDFQLPIR 582

Query: 506 FNAFYVNSHSE----------------------------------------KCHPVMIHR 525
           FN  Y                                                 PV+IHR
Sbjct: 583 FNLQYRTQDEAVAASREKAKDEKSEKRTENGDEPEATKEEEFGVEQPLRPGMARPVIIHR 642

Query: 526 AVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD 585
           A+ GSIER   ++IE+  G LP WLSP Q IV  I+    +YA  + ++L S    +  D
Sbjct: 643 AILGSIERMCAVVIEHTGGKLPFWLSPRQCIVLPISDKVNDYATSVRDVLHSCGYEVGLD 702

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV-SLLDAIPILTKE 644
             N T+N KIRE  +++   +++ G+KE +++++ +R       Q V S+ D + +  K+
Sbjct: 703 VSNNTVNKKIREAQLQQWNYLLVVGEKERADKTVTVRDRADPEHQHVLSMEDLLQLFEKQ 762

Query: 645 SLP 647
            +P
Sbjct: 763 GMP 765


>gi|206896471|ref|YP_002247167.1| threonyl-tRNA synthetase [Coprothermobacter proteolyticus DSM 5265]
 gi|206739088|gb|ACI18166.1| threonyl-tRNA synthetase [Coprothermobacter proteolyticus DSM 5265]
          Length = 632

 Score =  553 bits (1425), Expect = e-155,   Method: Composition-based stats.
 Identities = 252/603 (41%), Positives = 373/603 (61%), Gaps = 24/603 (3%)

Query: 49  DLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF 108
           D S  V E  +E I+     +L+V+RHS +H+MA+AV++++P  ++ IGP IE+GFYYD 
Sbjct: 40  DESATVGEDGVEFISK--EEALSVLRHSASHLMAQAVKNLFPGTKLGIGPAIENGFYYDM 97

Query: 109 DKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK 168
              +  +  +L +IE++M  +     P  +Q ++ E A++LF+S  E +KVE++E I   
Sbjct: 98  LIPEGLTEADLTRIEEEMVRLSKESLPVERQVMTKEDAKKLFQSLNEPFKVELIEEI-EG 156

Query: 169 ENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQ 228
           + VT+YRQGE+ DLCRGPHV +TG +K F KL+ ++GAYWRGD NR  L+RIYGT + T 
Sbjct: 157 DYVTVYRQGEFVDLCRGPHVNNTGLIKHF-KLLSISGAYWRGDENREQLTRIYGTCFWTS 215

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-K 286
            EL ++L+ LEE+E+RDHRKL +++DLF I ED G G+I WH  G  I + +  + R+  
Sbjct: 216 DELEEFLHNLEEAERRDHRKLGKQLDLFSINEDIGPGLILWHPNGAVIRKEIEDFWRQSH 275

Query: 287 IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA 346
           I + Y+ + TP V    LW+ SGH   Y+ NMF     ++     +++ +KPMNCP HV 
Sbjct: 276 IDNGYQLVYTPHVARTKLWEISGHLSFYKENMFPSMELEN-----QSYLVKPMNCPFHVQ 330

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           ++    +SY+ELP+R AE G+VYR E SG LHGL+RVRGFTQDDAH+FC +EQ+  E  K
Sbjct: 331 IYKTKTRSYKELPIRFAELGTVYRFERSGVLHGLLRVRGFTQDDAHIFCAREQVEEEVEK 390

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDR 462
           + ++ + IY+ FGFE + ++LS R  K     VG D +W+ AE+ + G L          
Sbjct: 391 VLDMALGIYRLFGFEDLRIELSVRDPKNKDKYVGDDDVWELAESALSGALKA------RD 444

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
           ++  V  GE  FYGP  +  +KDA+GR WQ  TIQVDFNLP RFN  Y      +  PVM
Sbjct: 445 LDFTVAEGEAKFYGPAIDIKVKDALGRYWQGPTIQVDFNLPRRFNMKYTGQDGLEHEPVM 504

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSI 582
           IHRA+ GS+ERF  ++IE + G  PLW++P Q  +  IT   ++YAQ +A  LK     +
Sbjct: 505 IHRALLGSLERFFALLIEQYSGWFPLWVAPEQVRILPITEDQMQYAQSVAEGLKE--FRV 562

Query: 583 ETD-FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           + D      + Y+IR    +K+P +++ G KE     + +R        ++SL +   ++
Sbjct: 563 KLDTDTGSKLGYRIRRGQTEKVPYMLVVGSKEVESGVVSVRHGVKGDLGQMSLDEFKSMI 622

Query: 642 TKE 644
            +E
Sbjct: 623 KEE 625


>gi|145230123|ref|XP_001389370.1| threonyl-tRNA synthetase, cytoplasmic [Aspergillus niger CBS
           513.88]
 gi|134055485|emb|CAK44000.1| unnamed protein product [Aspergillus niger]
          Length = 718

 Score =  553 bits (1425), Expect = e-155,   Method: Composition-based stats.
 Identities = 225/670 (33%), Positives = 362/670 (54%), Gaps = 47/670 (7%)

Query: 4   DIKLT--FPDGSIKNF---PVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EG 57
           +IK+T    DG+  +        T + + +++ + L+   V   +  ++ DLS P+  E 
Sbjct: 53  EIKVTIELGDGNSIDVTANAWETTPAQLLKNVPKELSANVVLARVGKELWDLSRPLEGEC 112

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK--EQPFS 115
           ++  +  + P    V  HS AH + EA +  +    ++ GP    GF+YD      +   
Sbjct: 113 TVSYVPFDHPEGREVFWHSSAHCLGEACECEY-GCLLSHGPPTPQGFFYDMAMPDNRVVR 171

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
             +   +++    I      F +  ++ E  +++F   K  YK+  ++ +   E  T+YR
Sbjct: 172 ETDWPSLDRHANRIFKEKQSFDRLEVTKENLKKMFAYSK--YKLHYIDKLVTGEKSTVYR 229

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
            G   DLCRGPH++STG+VK F K+M+ + AY+ GD +   L RI G A+  ++++ ++L
Sbjct: 230 CGSLVDLCRGPHIQSTGKVKTF-KIMQNSSAYFLGDQSNDSLQRIRGVAFPDKKQMQEHL 288

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEI 294
            FLEE+EKR+H KL +E +LF   E   G  F    G KIF  L S +R + +   Y+E+
Sbjct: 289 KFLEEAEKRNHVKLGKEQELFFFDEVSPGCPFLLPNGTKIFNALQSLLRSEYRKRGYQEV 348

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
            TP + D  +W+ SGHW  Y+ +MF +        + R +ALKPMNCPGH  +F H  +S
Sbjct: 349 QTPNMYDVGIWKTSGHWAHYKDDMFKLDV------EKREWALKPMNCPGHFVLFGHRERS 402

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YRELP+R+A+FG ++RNE SG+L GL RVR F QDD H+FCT++Q+ +E   + + + +I
Sbjct: 403 YRELPLRIADFGVLHRNEASGALSGLTRVRKFQQDDTHIFCTQDQITSEIEGLFDFLQAI 462

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           Y  FGF   + KLSTRPEK +G    W+ AE  +K  +   K +     +  +  G+GAF
Sbjct: 463 YGLFGFTFKL-KLSTRPEKYLGELETWNYAEEQLKAAMTKFKGN-----DWTIDEGDGAF 516

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE------------------ 516
           YGPK +  + DA+ R++QC TIQ+D+  P  F   Y+++                     
Sbjct: 517 YGPKIDITIADALKREFQCATIQLDYQAPINFKLEYMSNEKASADAAKEGEAKPNEPGPG 576

Query: 517 KCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLK 576
           +  PV+IHRA+ GS ERF+GI+IE+F G  P W+SP Q ++  +  +  +Y +E+  +L+
Sbjct: 577 RARPVVIHRAIIGSFERFLGILIEHFGGKWPFWISPRQILIVPVMPAVNDYVEELQTILR 636

Query: 577 SHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK----V 632
              L+++ D    T+  KIR   +++   I + G  E   R++ IR      TQK    +
Sbjct: 637 GDKLNVDIDLSGNTMQKKIRTGQLQQYNFIFVVGASEKESRTVNIRNRDDPATQKQGVMI 696

Query: 633 SLLDAIPILT 642
            L +    L 
Sbjct: 697 PLDEVREKLR 706


>gi|296084987|emb|CBI28402.3| unnamed protein product [Vitis vinifera]
          Length = 688

 Score =  553 bits (1425), Expect = e-155,   Method: Composition-based stats.
 Identities = 260/597 (43%), Positives = 374/597 (62%), Gaps = 27/597 (4%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSD 117
            I + T E    L  IRH+CAH+MA AVQ ++P+ +V IGP IE+GFYYDFD E P +  
Sbjct: 94  KIVLPTNESSERLLRIRHTCAHVMAMAVQKLFPDAKVTIGPWIENGFYYDFDME-PLTDK 152

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +L +I+K+M  II R+ P +++ +S ++A+    +  E YK+EIL+SI        +  G
Sbjct: 153 DLKRIKKEMDRIIGRNLPLIREEVSRDEAQRRIMAVNEPYKMEILDSIQEDPITIYHIGG 212

Query: 178 EWFDLCRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           EW+DLC GPHV  TG + +K  +L  VAGAYWRGD  + ML RIYGTAW  +++L  YL+
Sbjct: 213 EWWDLCAGPHVEYTGNINRKAVELESVAGAYWRGDEKKQMLQRIYGTAWENEEQLKAYLH 272

Query: 237 FLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEI 294
           F EE+++RDHR+L +++DLF I ++ G G++FWH KG  + + +    ++  I+  Y+ +
Sbjct: 273 FKEEAKRRDHRRLGQDLDLFSIQDEAGGGLVFWHPKGAIVRRIIEDSWKKIHIEHGYDLL 332

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
            TP V    LW+ SGH D YR NM++    +D +     + L+PMNCP H+ ++   L S
Sbjct: 333 YTPHVARADLWKTSGHLDFYRENMYSQITIEDEL-----YQLRPMNCPYHILIYKRKLHS 387

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YR+ P+R+AE G+VYR E SGSLHGL RVRGFTQDDAH+FC ++Q+ +E   + +L   I
Sbjct: 388 YRDFPIRVAELGTVYRYELSGSLHGLFRVRGFTQDDAHIFCLEDQIKDEIRGVLDLTEEI 447

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
              FGF K  V LSTRPEK VG+D +W+ A + ++  LD    S        +  G GAF
Sbjct: 448 LLQFGFSKYEVNLSTRPEKAVGADDIWEKATSALRDALDDKGWS------YRIDEGGGAF 501

Query: 475 YGPKFEYILKDAIGRDWQCGTIQ-----------VDFNLPSRFNAFYVNSHSEKCHPVMI 523
           YGPK +  ++DA+GR WQC TIQ           VDFNLP RF+  YV+S+SEK  P+MI
Sbjct: 502 YGPKIDLKIEDALGRKWQCSTIQANRLDLSFTKEVDFNLPQRFDITYVDSNSEKQRPIMI 561

Query: 524 HRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIE 583
           HRAV GS+ERF G++IE++ G+ PLWLSPIQA V  +T + +EY  E+ N LK++ +  E
Sbjct: 562 HRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVTNKLKANGIRAE 621

Query: 584 TDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
                E +   IR    ++IP++ + G KE   +++ +R         + + D I  
Sbjct: 622 V-CHGERLPKLIRNSEKQRIPLMAVVGPKEVETQTVTVRSRFGGELGTMIVEDFISR 677


>gi|255071699|ref|XP_002499524.1| predicted protein [Micromonas sp. RCC299]
 gi|226514786|gb|ACO60782.1| predicted protein [Micromonas sp. RCC299]
          Length = 613

 Score =  553 bits (1424), Expect = e-155,   Method: Composition-based stats.
 Identities = 251/589 (42%), Positives = 364/589 (61%), Gaps = 18/589 (3%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           ++++T ++   L  IRH+ AHI A AVQ ++P  QV IGP I+ GFYYDFD    FS  +
Sbjct: 28  VKLLTSDESEELLKIRHTTAHICAMAVQRLFPTAQVTIGPWIDRGFYYDFDYPAGFSDKD 87

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L  I+K+M +II +D P  ++ +S E+AR+  E+  E YK+EIL++I   E +T+Y  G+
Sbjct: 88  LKDIKKQMIKIINKDMPLRREEVSREEARKRIEALNEPYKLEILDAIK-TEPITIYHIGD 146

Query: 179 -WFDLCRGPHVRSTGQVKK-FFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
            W+DLC GPHV ST  +      L  VAGAYWRGD  RPML RIYGTAW+T +EL  Y  
Sbjct: 147 EWWDLCAGPHVESTKAIHPKAIDLESVAGAYWRGDEKRPMLQRIYGTAWSTPEELKAYND 206

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDG--SGVIFWHRKGWKIFQTLISYMRR-KIKDDYEE 293
           F  E+ +RDHRK+ ++++LF I ++    G++FWH KG  +   +  + +   ++  Y+ 
Sbjct: 207 FKAEAARRDHRKVGKDLNLFSIQQEDVGGGLVFWHPKGALMRDMIERFWKDIHLERGYDL 266

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           + TP V    LW+ SGH D Y  NM+     +D      T+ LKPMNCP HVAV+  G  
Sbjct: 267 LYTPHVGKLDLWKTSGHADFYSENMYRPIDVED-----ETYQLKPMNCPFHVAVYKDGYF 321

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYR+LP+R AE G+VYR E SG++HGL RVRGFTQDDAH+FC  +Q+ +E   + +L   
Sbjct: 322 SYRDLPIRWAEMGTVYRYERSGTMHGLFRVRGFTQDDAHIFCLPDQIADEIKGVLDLTED 381

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           I   FGF++  V LST+PEK VG   +WD AE  +K  L      +Q   +  V  G GA
Sbjct: 382 ILSTFGFKEFEVNLSTQPEKSVGGPEIWDKAEGALKDAL------AQKGWDYEVDEGGGA 435

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  + DAIGR WQC T+Q+DFNLP RF+  Y++  + K  P+MIHRA+FGS+ER
Sbjct: 436 FYGPKIDIKILDAIGRKWQCSTVQLDFNLPERFDLAYIDKENVKQRPIMIHRAIFGSLER 495

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           F GI+ EN+ G  PLW++P Q  +  +T +  +Y QE A  L++  +  +     E +  
Sbjct: 496 FFGILTENYAGAFPLWIAPTQVRLLPVTDAVDDYVQETARKLRAAGIRCDV-QSQERLAK 554

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +R     KIP++ + G++EA + ++ +R +       +S+ D +  ++
Sbjct: 555 LVRNAEKAKIPVMCVVGEQEAKDGTLAVRTYADGDQGVLSVDDVVARIS 603


>gi|223984594|ref|ZP_03634721.1| hypothetical protein HOLDEFILI_02017 [Holdemania filiformis DSM
           12042]
 gi|223963441|gb|EEF67826.1| hypothetical protein HOLDEFILI_02017 [Holdemania filiformis DSM
           12042]
          Length = 590

 Score =  553 bits (1424), Expect = e-155,   Method: Composition-based stats.
 Identities = 236/594 (39%), Positives = 375/594 (63%), Gaps = 21/594 (3%)

Query: 55  REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQP 113
            EG+  +I  ++   L V+ HSCAH++A+AV+ ++P  +  +GP+I DGFYYD D  +  
Sbjct: 7   EEGT--MINIKEDEHLHVLNHSCAHLLAQAVKHLYPHAKFWVGPVITDGFYYDIDLGDDV 64

Query: 114 FSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENV-T 172
              ++LA+IEK+M++I       ++  +S  +A E+F+   + YK++++  +   + V +
Sbjct: 65  LHEEDLAKIEKEMKKIAKDGKRIVRHEISKAEALEMFK--DDPYKLDLIGHMDEDDTVIS 122

Query: 173 LYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELT 232
            Y QG++ DLCRGPHV S  ++K F KL+KV+GAYW+GD+N  ML R+YG  ++T +E+ 
Sbjct: 123 CYSQGDFTDLCRGPHVESVKELKHF-KLLKVSGAYWKGDANNKMLQRVYGICFDTDEEVQ 181

Query: 233 QYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDY 291
            YL FLEE++KRDH+KL RE+DLF ++E G G  F+   G  +   L +Y   +  K+ Y
Sbjct: 182 NYLNFLEEAKKRDHKKLGRELDLFMMSEYGPGFPFFLPNGMILRNVLENYWYEEHTKEGY 241

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           + I TP +L + LW+ SGHW +Y+ NM+          D R FA+KPMNCPG + V+ +G
Sbjct: 242 QFIKTPIMLSKDLWELSGHWANYQDNMYTTMI------DDREFAIKPMNCPGGILVYKNG 295

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI 411
           L SY++LP+R+ E G V+R+E SG+L+GL RVR FTQDDAH+F  ++Q+ +E +++ N I
Sbjct: 296 LHSYKDLPLRIGELGQVHRHEASGALNGLFRVRTFTQDDAHIFMREDQIESEVVRLINFI 355

Query: 412 ISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
             +Y  FG    +   +   +K +GS  +WD AE  ++        + +      +  G+
Sbjct: 356 DRVYSVFGLSYEIELSTRPEKKYIGSIEIWDKAEAALEAACHAAGKACK------INPGD 409

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
           GAFYGPK ++ L D++GR WQCGTIQ+D NLP RF+  YV++   K  P+M+HR +FGSI
Sbjct: 410 GAFYGPKLDFHLTDSLGRVWQCGTIQLDMNLPERFDLTYVDADGSKKRPIMLHRVIFGSI 469

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTI-TSSAVEYAQEIANLLKSHHLSIETDFRNET 590
           ERFIGI+IE++ G  P+WL+P Q ++  +     ++YA+E+  +L +  + ++ D RNE 
Sbjct: 470 ERFIGILIEHYAGAFPMWLAPQQVVIVPVHHERHLDYAKELEAMLLAKGVRVKVDGRNEK 529

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           + Y++RE    KIP+ I+ GD E    +  +RR+G   +  +S  + +  +  E
Sbjct: 530 LGYRVREAQTHKIPMQIVVGDGEVENNTATVRRYGKKDSVTLSKEELLESILNE 583


>gi|256826891|ref|YP_003150850.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Cryptobacterium
           curtum DSM 15641]
 gi|256583034|gb|ACU94168.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Cryptobacterium
           curtum DSM 15641]
          Length = 586

 Score =  552 bits (1423), Expect = e-155,   Method: Composition-based stats.
 Identities = 240/584 (41%), Positives = 358/584 (61%), Gaps = 19/584 (3%)

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQI 122
           PED   L V+RHS AHI+A+AV+ ++PE +   GP  ++GFYYD D  +   S D+L  I
Sbjct: 14  PEDEE-LHVLRHSAAHILAQAVKRLYPEARFGYGPANDNGFYYDIDLGDAKISEDDLPTI 72

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E ++++I+  +  F    L  E+A +    + E+YK E +  +P    +T Y+QGE+ D+
Sbjct: 73  EAEIKKIVKENLKFTVFELPREEAVKFMTERGESYKAEHIGDLPEDTRLTFYQQGEYVDM 132

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPH+  T  +K F KL  V+GAYW+GD+   ML+RI G A+ T++EL  +   L E+E
Sbjct: 133 CVGPHITYTKALKAF-KLTNVSGAYWKGDAANKMLTRIGGVAFRTKEELVHHEELLAEAE 191

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           KRDHRK+ REM+LF +A++G G  FW   G ++   L  Y    +    YE+++TP +L 
Sbjct: 192 KRDHRKIGREMELFMMADEGPGFPFWLPNGMRLKNALTQYWMEMQEAYGYEQVDTPIILS 251

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHWD Y+ NM+       T+ D   +A+KPMNCPG   ++    +SYR+LP++
Sbjct: 252 RKLWETSGHWDHYKENMYT------TVIDDEDYAVKPMNCPGACLIYKSKPRSYRDLPLK 305

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LAE G  +R+E  G+LHGL RVR FTQDDAH+F   +Q+  +     +LI + Y+ FGF 
Sbjct: 306 LAEAGKDHRHELKGALHGLFRVRAFTQDDAHLFIRPDQITEQVTDTAHLITAYYEQFGF- 364

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+LSTRP+  +GSD  W  AE  ++  L+ +       ++  +  G+GAFYGPK ++
Sbjct: 365 PYRVELSTRPDDSMGSDEDWALAEEGLRQALEAMG------VDYTLNEGDGAFYGPKIDF 418

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L+D +GR WQCGTIQ+DF LP  F   Y +S   K  P++IHRA FGS ERFIG++ E 
Sbjct: 419 HLQDCLGRTWQCGTIQLDFQLPQNFELEYTDSDGSKKRPILIHRAGFGSFERFIGMLTEQ 478

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS-I 600
           + G  P WLSP+Q  V  ++    EY+++IA+ L+   + ++ D R+E I YKIRE   +
Sbjct: 479 YAGKFPTWLSPLQVKVLPVSEKHREYSRQIADKLRQAGVRVKVDERDEKIGYKIREARSV 538

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            ++P ++I G+ E    +I +R   + T Q+ SL D I  +  E
Sbjct: 539 DRVPYMLILGEVEEEAGNISVRDRSNETVQR-SLDDFITDIQAE 581


>gi|269216980|ref|ZP_06160834.1| threonine--tRNA ligase [Slackia exigua ATCC 700122]
 gi|269129787|gb|EEZ60871.1| threonine--tRNA ligase [Slackia exigua ATCC 700122]
          Length = 587

 Score =  552 bits (1423), Expect = e-155,   Method: Composition-based stats.
 Identities = 239/583 (40%), Positives = 358/583 (61%), Gaps = 19/583 (3%)

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQIE 123
           ED   L V+RHS AHIMA+AV+ ++PE     GP  ++GFYYD D  +   S ++ A IE
Sbjct: 15  EDEE-LDVLRHSAAHIMAQAVKRLYPEADFGYGPATDNGFYYDIDFADTKISEEDFAAIE 73

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M++I   +  F    L   +A  L E + E YKVE +  +P    +T Y+QGE+ D+C
Sbjct: 74  AEMKKICKENLKFSVFELPRAEAVALMEERGEKYKVEHIGDLPEDSRITFYQQGEYIDMC 133

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
            GPH+  T  +K F KL  V+GAYW+GD +  ML+RI G A+ +++EL ++   + E+EK
Sbjct: 134 VGPHICYTKALKAF-KLTAVSGAYWKGDKDNKMLTRINGIAFRSKEELAEHERMVAEAEK 192

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           RDHR++ REM+LF +A++G G  FW   G ++  +L+ Y    +    YE+++TP +L++
Sbjct: 193 RDHRRIGREMELFMMADEGPGFPFWLPNGMRLKNSLMQYWMDMQDAYGYEQVDTPIILNK 252

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGHWD Y+ NM+       T  D   +A+KPMNCPG   ++    +SYR+LP++L
Sbjct: 253 SLWETSGHWDHYKENMYT------TEIDGEEYAVKPMNCPGACLIYKSKPRSYRDLPLKL 306

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AE G  +R+E  G+LHGL RVR FTQDDAH+F   +Q+  +     +LI + Y+ FGF  
Sbjct: 307 AEAGKDHRHELKGALHGLFRVRAFTQDDAHLFIRPDQITEQVTDTAHLISTYYEQFGF-P 365

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+LSTRPE  +GSD  W+ AE  ++  L+ +       ++  +  G+GAFYGPK ++ 
Sbjct: 366 YRVELSTRPEDSMGSDEDWELAEAGLRAALEAMG------VDYILNEGDGAFYGPKIDFH 419

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L+D +GR WQCGTIQ+DF LP  F   Y ++   K  P+MIHRA FGS ERFIG++ E +
Sbjct: 420 LQDCLGRTWQCGTIQLDFQLPQNFELEYTDADGMKKRPIMIHRAGFGSFERFIGMLTEQY 479

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS-IK 601
            G  P WLSP Q  V  ++    EYA+ + + L++  +  + D R+E I YKIRE   I 
Sbjct: 480 AGKFPTWLSPCQVKVLPVSEKHREYARGVYDALRAAGIRAKLDERDEKIGYKIREARGID 539

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           ++P ++I G+KE +  +I +R   + T ++  L + I  +T E
Sbjct: 540 RVPYMLILGEKEENAGNISVRDRSNETVER-DLGEFIADVTAE 581


>gi|302541133|ref|ZP_07293475.1| threonine-tRNA ligase [Streptomyces hygroscopicus ATCC 53653]
 gi|302458751|gb|EFL21844.1| threonine-tRNA ligase [Streptomyces himastatinicus ATCC 53653]
          Length = 659

 Score =  552 bits (1423), Expect = e-155,   Method: Composition-based stats.
 Identities = 249/666 (37%), Positives = 372/666 (55%), Gaps = 41/666 (6%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEI 61
           SD+++     S +   V  TG+  A+  +    +  VA  + G++ DL+    +G  IE 
Sbjct: 2   SDVRVIIQRDSEREERVVTTGTTAADLFAGD--RSIVAARVGGQLKDLAYEPADGEEIEP 59

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +       L ++RHS AH+MA+AVQ ++PE ++ IGP I+DGFYYDFD E PF  ++L +
Sbjct: 60  VEITSQDGLDILRHSTAHVMAQAVQELFPEAKLGIGPPIKDGFYYDFDVETPFQPEDLKR 119

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-------------ESIPAK 168
           IEKKMQEI  R   F ++ ++        E   E YK+E++              +    
Sbjct: 120 IEKKMQEIQKRGQKFSRRAVT--DEAAREELAAEPYKLELIGLKGSAADAAEGASAEVGA 177

Query: 169 ENVTLYRQGE-------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIY 221
             +T+Y   +       W DLCRGPH+ +T  +  F KLM+ A AYWRG    P L RIY
Sbjct: 178 GELTIYDNLDAKSGDLCWKDLCRGPHLPTTRNIPAF-KLMRSAAAYWRGSEKNPQLQRIY 236

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLI 280
           GTAW T+ EL  YL FL E+EKRDHRKL  E+DLF   ++ GSG+  +H +G  I + + 
Sbjct: 237 GTAWPTKDELKAYLEFLAEAEKRDHRKLGAELDLFSFPDELGSGLAVFHPRGGVIRKEME 296

Query: 281 SYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPM 339
            Y R++ ++  YE +N+P +    L++ SGH   Y   MF          + + + LK M
Sbjct: 297 DYSRKRHEESGYEFVNSPHITKAKLFETSGHLPHYMDGMFPPMEF-----EGQDYYLKAM 351

Query: 340 NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQ 399
           NCP H  +F    +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDD+H++CTKEQ
Sbjct: 352 NCPMHNLIFRARGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDSHIYCTKEQ 411

Query: 400 MFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE--KRVGSDALWDDAENIMKGVLDTIKN 457
           M +E   +   ++ + +D+G     ++LSTR +  K +G    W++A   ++   +    
Sbjct: 412 MADELDNLLTFVLDLLRDYGLNDFYLELSTRDDSDKFMGEPEQWEEATEELRKAAE---- 467

Query: 458 SSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK 517
             +  +   +  G  AFYGPK     KDAIGR WQ  TIQVDFN P+RFN  Y  +   +
Sbjct: 468 --KQGLELVMDPGGAAFYGPKISVQAKDAIGRTWQMSTIQVDFNQPARFNLEYTAADGSR 525

Query: 518 CHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKS 577
             PVM+HRA+FGSIERF  +++E++ G  P WL+P+QA+   I    V Y +E A   ++
Sbjct: 526 QQPVMLHRALFGSIERFFAVLLEHYAGAFPAWLAPVQAVGIPIGDGHVPYLEEFAAQARA 585

Query: 578 HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
             L +E D  ++ +  KIR     K+P ++I GD++ +  ++  R    +    + + +A
Sbjct: 586 KGLRVEVDSSSDRMQKKIRNAQRSKVPFMVIAGDEDVAAGAVSFRYRDGSQKNGIPIDEA 645

Query: 638 IPILTK 643
           I  +  
Sbjct: 646 IAEIID 651


>gi|226306390|ref|YP_002766350.1| threonyl-tRNA synthetase [Rhodococcus erythropolis PR4]
 gi|259516659|sp|C0ZZ26|SYT_RHOE4 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|226185507|dbj|BAH33611.1| threonyl-tRNA synthetase [Rhodococcus erythropolis PR4]
          Length = 685

 Score =  552 bits (1422), Expect = e-155,   Method: Composition-based stats.
 Identities = 246/659 (37%), Positives = 378/659 (57%), Gaps = 41/659 (6%)

Query: 17  FPVHAT-GSDVAESISRSLAKKAVAVAINGK--VCDLS-DPVREGSIEIITPEDPRSLAV 72
            P   T G+ V E+   +     + V  +G+  + DLS  P  +  +E +        +V
Sbjct: 15  VPAGTTAGTAVREAGYPTKGPDVIVVVRDGEGTLKDLSWTPEVDVDVEPVAASTEDGRSV 74

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIAR 132
           IRHS AH++A+AVQ  +P+ ++ IGP I+DGFYYDF  ++PF+ ++LA++EK+M++II  
Sbjct: 75  IRHSAAHVLAQAVQKEFPDAKLGIGPPIKDGFYYDFAVDRPFTPEDLAKLEKRMKQIIKG 134

Query: 133 DSPFLKQYL-SHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE------------- 178
              F ++ + S E AR   E   E +K+E+++     ++  +   G              
Sbjct: 135 SQRFSRRVVDSIEDAR--VELADEPFKLELIDDKSGIDDPEIMEVGGNELTIYDNLDPRT 192

Query: 179 ----WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
               W DLCRGPH+ +T  +  F KL + + AYWRG+ +   L R+YGTAW + +   +Y
Sbjct: 193 GDKIWSDLCRGPHIPTTKHIPAF-KLTRSSAAYWRGNQDNADLQRVYGTAWESTEAQDEY 251

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYE 292
           L  L E+E+RDHRKL  E+DLF   ++ GSG+  +H KG  I   + +Y R R I+  YE
Sbjct: 252 LELLAEAERRDHRKLGTELDLFSFPDELGSGLPVFHPKGGIIRTEMENYSRSRHIEAGYE 311

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD-------LRTFALKPMNCPGHV 345
            +NTP +   HL++ SGH D YR  MF     D+ + +        + + LKPMNCP H 
Sbjct: 312 FVNTPHITKGHLYEVSGHLDWYRDGMFPAMHVDEELNEDGTVRKPGQDYYLKPMNCPMHN 371

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +F    +SYRELP+RL EFGSVYR E SG +HGL RVRG TQDDAH++CT+EQM +E  
Sbjct: 372 LIFRARGRSYRELPLRLFEFGSVYRYEKSGVIHGLTRVRGMTQDDAHIYCTREQMRDELT 431

Query: 406 KIHNLIISIYKDFGFEKIMVKLS-TRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
                ++++ KD+G +   ++LS   P+K VGSD +W++A   +  V +         + 
Sbjct: 432 TTLQFVLNLLKDYGLDDFYLELSTKNPDKFVGSDDVWEEATATLAEVGEASG------LT 485

Query: 465 TGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIH 524
                G  AFYGPK    +KDA+GR WQ  TIQ+DFNLP RF   Y  +   K  PVMIH
Sbjct: 486 LVPDPGGAAFYGPKISVQVKDALGRTWQMSTIQLDFNLPERFELEYTGNDGVKTRPVMIH 545

Query: 525 RAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIET 584
           RA+FGSIERF G++ E++ G  P WL+P+Q +   +  +  ++  ++   LK+  +  E 
Sbjct: 546 RALFGSIERFFGVLTEHYAGAFPAWLAPVQVVGIPVAEAFADHLFDVTKKLKAAGVRAEV 605

Query: 585 DFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           DF ++ +  KIR H+ +K+P +++ G+++    ++  R    T    + + DA+ I+T+
Sbjct: 606 DFSDDRMQKKIRNHTTQKVPFMLLAGERDVEAGAVSFRFRDGTQINGIPVDDAVRIITE 664


>gi|303233025|ref|ZP_07319704.1| threonine--tRNA ligase [Atopobium vaginae PB189-T1-4]
 gi|302480896|gb|EFL43977.1| threonine--tRNA ligase [Atopobium vaginae PB189-T1-4]
          Length = 589

 Score =  552 bits (1422), Expect = e-155,   Method: Composition-based stats.
 Identities = 244/582 (41%), Positives = 359/582 (61%), Gaps = 19/582 (3%)

Query: 67  PRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ--PFSSDELAQIEK 124
                 IRHSCAH++A+AV+ ++P    A GP  E+GFYYD    +    S D+L  IE 
Sbjct: 16  EEQTHTIRHSCAHLLAQAVKRLYPNTHFAYGPATENGFYYDMSFGEGVKISEDDLPAIEA 75

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
           +M++I   +       L   +A      + E +KVE +   P    +T Y+QGE+ D+C 
Sbjct: 76  EMKKIAKENLKVETFELPRAEAIAFLNERGERFKVEHIADFPESTRLTFYKQGEYVDMCT 135

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV  T +++ F KL  ++GAYW+ +S+  ML+RI G A++T++EL +Y   + E+EKR
Sbjct: 136 GPHVCYTSKLRAF-KLTGISGAYWKANSDNEMLTRISGVAFDTKEELAEYERLIAEAEKR 194

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQH 303
           DHRK+ +EMDLF + E G G  FW   G +I   L+ Y +  + +  YE+I TP +L + 
Sbjct: 195 DHRKIGKEMDLFMLNEAGPGFPFWLPNGMRIRNELMKYWQEMQDQYGYEQIQTPIILSRK 254

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+ SGHWD Y+ NM+       T+ D   FA+KPMNCPG   V+    +SYR+LP++LA
Sbjct: 255 LWETSGHWDHYKENMYT------TVIDDEDFAIKPMNCPGACLVYMSKPRSYRDLPLKLA 308

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           E G  +R+E  G+LHGL RVR FTQDDAH+F   +Q+ +E  ++  LI + YK FGF   
Sbjct: 309 EAGLDHRHELKGTLHGLFRVREFTQDDAHLFIRPDQICDEVREVTELISAYYKQFGF-PY 367

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            V+LSTRPE  +GSD  W  AE  ++  L+T+       ++  +  G+GAFYGPK ++ L
Sbjct: 368 KVELSTRPENSMGSDEDWATAEAGLRDALETMG------LDYTINEGDGAFYGPKIDFHL 421

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           KD +GR WQCGTIQ+DF  P  FN  YV+S  +K  P+MIHRA FGS ERFIG++IE ++
Sbjct: 422 KDCLGRTWQCGTIQLDFQFPHNFNLEYVDSDGQKKRPIMIHRAGFGSFERFIGMLIEQYE 481

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS-IKK 602
           G  P+WL+P+Q  V  ++    +YA+E+   L    + ++ D R+E I YKIRE   I +
Sbjct: 482 GKFPVWLAPLQVKVLPVSEKTRDYARELTQKLLKLKIRVKLDDRDEKIGYKIREARSIDR 541

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P ++I G++EA   +I +R   +TTTQ  +  D + +L ++
Sbjct: 542 VPYMLIVGEQEAQAGNISVRDRSNTTTQ-YAFDDFVALLQRQ 582


>gi|300863511|ref|ZP_07108463.1| threonyl-tRNA synthetase [Oscillatoria sp. PCC 6506]
 gi|300338467|emb|CBN53605.1| threonyl-tRNA synthetase [Oscillatoria sp. PCC 6506]
          Length = 608

 Score =  552 bits (1422), Expect = e-155,   Method: Composition-based stats.
 Identities = 242/601 (40%), Positives = 360/601 (59%), Gaps = 16/601 (2%)

Query: 50  LSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD 109
           LS P +   I +    +   L  IRH+ +H+MA AVQ ++P+  V IGP IE+GFYYDFD
Sbjct: 7   LSAPEQPAKIHLPRTSESEPLKKIRHTTSHVMAMAVQKLFPKALVTIGPWIENGFYYDFD 66

Query: 110 KEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKE 169
             + F+  +L  I+K+M +II R  P +++ +S E+A    +   E YK+EILE +   E
Sbjct: 67  IPEAFTEKDLKSIKKEMIKIINRKLPLIREEVSREEAERRIKEINEPYKLEILEGL--TE 124

Query: 170 NVTLYRQGE-WFDLCRGPHVRSTGQVKK-FFKLMKVAGAYWRGDSNRPMLSRIYGTAWNT 227
            +T+Y  G+ W+DLC GPH+ +T ++     +L  VAGAYWRGD  +  L RIYGTAW  
Sbjct: 125 PITIYHLGDEWWDLCAGPHLENTSELNPKAIELESVAGAYWRGDETKAQLQRIYGTAWEN 184

Query: 228 QQELTQYLYFLEESEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYM-RR 285
            ++L +Y    EE+ +RDHRKL +E+ LF      G G+  W  KG  +   L  ++ + 
Sbjct: 185 PEQLQEYQRRKEEALRRDHRKLGKELGLFIFADVVGPGLPLWTPKGTILRSILEDFLKQE 244

Query: 286 KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT-IKDLRTFALKPMNCPGH 344
           ++K  Y  + TP +    L++ SGHW  Y+ +MF +   D+   K  + F LKPMNCP H
Sbjct: 245 QVKRGYLPVVTPHIGRVDLFKTSGHWQKYKEDMFPMMAEDEESAKAEQGFVLKPMNCPFH 304

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           + ++   L+SYRELP+RLAEFG+VYR E SG L GL RVRGFT DD+H+F T EQ+  E 
Sbjct: 305 IQIYKSELRSYRELPMRLAEFGTVYRYEQSGELGGLTRVRGFTVDDSHLFVTPEQLDAEF 364

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPE---KRVGSDALWDDAENIMKGVLDTIKNSSQD 461
           L + +LI+S++K    +    +LS R     K +GSD +W+ ++  ++  ++T+      
Sbjct: 365 LSVVDLILSVFKSLQLKNFKARLSFRDPTSDKYMGSDEVWEQSQGAIRRAVETLG----- 419

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
            +N    +GE AFYGPK ++I  DA+ R+WQ GT+QVD+NLP RF+  YV     +  PV
Sbjct: 420 -MNYFEGIGEAAFYGPKLDFIFSDALDREWQLGTVQVDYNLPERFDLEYVAEDGTRKRPV 478

Query: 522 MIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLS 581
           MIHRA FGS+ER IGI+IE + G+ P+WL+PIQ  +  +++  + +AQE+A  ++   + 
Sbjct: 479 MIHRAPFGSLERLIGILIEEYAGDFPVWLAPIQVRLLPVSNDFLPFAQEVAAKMRILGIR 538

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            E D  +E +   IR     KIP++ I G KE    S+ IR   S     +++ + I  L
Sbjct: 539 AEADVSSERLGKLIRNAEKDKIPVMGIVGAKEVESNSLSIRTRASGELGMIAVDEVINRL 598

Query: 642 T 642
            
Sbjct: 599 K 599


>gi|302656156|ref|XP_003019834.1| hypothetical protein TRV_06122 [Trichophyton verrucosum HKI 0517]
 gi|291183606|gb|EFE39210.1| hypothetical protein TRV_06122 [Trichophyton verrucosum HKI 0517]
          Length = 764

 Score =  552 bits (1422), Expect = e-155,   Method: Composition-based stats.
 Identities = 230/689 (33%), Positives = 357/689 (51%), Gaps = 66/689 (9%)

Query: 4   DIKLTFP--DG---SIKNFPVHATGSDVAESISRSLAKKAVAVAING-KVCDLSDPVR-E 56
           DI +T    DG   ++     H+T     + I + L+   V   ++G ++ DL  P+  +
Sbjct: 80  DITVTLEVGDGAPSTVIAQAWHSTPGSFLKDIPKELSSSVVIAKLDGKELWDLDRPLERD 139

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ--PF 114
             I  +  +      V  HS AH + EA +  +    ++ GP    GF+YD    +    
Sbjct: 140 CRIRYLPFDSVEGREVFWHSSAHALGEACECQY-GCLLSHGPPTAQGFFYDMAIPEGGVV 198

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
           +  +   ++ K  +I      F +  +S E  +++F   K  YK+  ++++   E+ T+Y
Sbjct: 199 TQADYPSLDAKTAKIFKEKQSFDRLEVSKENLKKMFGYSK--YKLHYIDNLIEGESSTVY 256

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
           R G   DLCRGPH+++TG++K   K+ + + AY+ GD     L RI G A+  ++ L ++
Sbjct: 257 RCGTLVDLCRGPHIQNTGKIK-AMKITQNSSAYFLGDQTNDALQRIRGVAFPDKKLLQEH 315

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEE 293
           L FLEE+EKR+H K+ +E +LF   E   G  F    G KIF  L   +R + +   Y+E
Sbjct: 316 LKFLEEAEKRNHLKIGKEQELFFFDEVSPGCPFLLPNGTKIFNALQKLLRTEYRKRGYQE 375

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           + +P + D  +W+QSGHW  Y+ +MF +        + R +ALKPMNCPGH  +F H  +
Sbjct: 376 VQSPNMYDVGIWRQSGHWAHYKDDMFKLDV------EKRDWALKPMNCPGHCIMFGHRER 429

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYRELP+R+A+FG ++RNE SG+LHGL RVR F QDD H+FCT  Q+  E   + + + +
Sbjct: 430 SYRELPLRMADFGVLHRNEASGALHGLTRVRKFQQDDTHIFCTDNQIMEEIEGLFDFLRA 489

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           IY  FGF    +KLSTRPEK +G    WD AE  ++  L   K +     +  +  G+GA
Sbjct: 490 IYGLFGF-SFKLKLSTRPEKYLGKLETWDFAEAQLREALTKFKGA-----DWEIDEGDGA 543

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC--------------- 518
           FYGPK +  + DA+ R+ QC TIQ+D+ LP  F   Y+   +                  
Sbjct: 544 FYGPKIDITISDALKREHQCATIQLDYQLPLNFKLEYMTGETVPKSAAPATSKAEAKPAE 603

Query: 519 ---------------------HPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIV 557
                                 PV+IHRA+ GS ERF GI+IE+F G  P WLSP Q ++
Sbjct: 604 GDSNPAQAQPSDSSTPGPGRARPVVIHRAIIGSFERFFGILIEHFGGKWPFWLSPRQILI 663

Query: 558 TTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASER 617
             + +SA +Y +E+  +L+   L+++ D    T+  KIR   + +   I + G +E   R
Sbjct: 664 VPVMASANDYVEELQEILRGDKLNVDIDLSGHTMQKKIRNGQLAQYNFIFVVGAQEKESR 723

Query: 618 SIGIRRFGSTTTQK----VSLLDAIPILT 642
           S+ IR     ++Q     V L +A   L 
Sbjct: 724 SVNIRNRDDPSSQTKGSLVPLEEARAKLR 752


>gi|170077251|ref|YP_001733889.1| threonyl-tRNA synthetase [Synechococcus sp. PCC 7002]
 gi|169884920|gb|ACA98633.1| threonyl-tRNA synthetase [Synechococcus sp. PCC 7002]
          Length = 604

 Score =  552 bits (1422), Expect = e-155,   Method: Composition-based stats.
 Identities = 239/595 (40%), Positives = 357/595 (60%), Gaps = 16/595 (2%)

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           ++    +  +L  IRH+ +H+MA AVQ ++P+ QV IGP  E+GFYYDFDK +PF+  +L
Sbjct: 13  KLPKTSESDTLKRIRHTTSHVMAMAVQKLFPDAQVTIGPWTENGFYYDFDKPEPFTEADL 72

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE- 178
             I+K+M +I+ +  P +++ +S  +A +  +   E YK+EIL  I   + +TLY  G+ 
Sbjct: 73  KAIKKEMVKIVKKKLPVVREEISRAEAEKRIKEINEPYKLEILAGIH--DPITLYYLGDQ 130

Query: 179 WFDLCRGPHVRSTGQVKK-FFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           W+DLC GPHV +TG +      L  VAGAYWRGD N   L RIYGTAW T ++L +Y   
Sbjct: 131 WWDLCAGPHVENTGDINPKAIALESVAGAYWRGDENNQQLQRIYGTAWETPEQLKEYQRR 190

Query: 238 LEESEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEIN 295
            EE+ KRDHRKL RE+ LF  + + G G+  W  KG  I  TL ++++  + K  Y+ + 
Sbjct: 191 KEEALKRDHRKLGRELGLFMFSDQVGPGLPLWTPKGTLIRSTLENFLKAEQTKRGYQGVV 250

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD-LRTFALKPMNCPGHVAVFNHGLKS 354
           TP +    L++ SGHW +YR +MF +    D  +   + F +KPMNCP H+ ++   L+S
Sbjct: 251 TPHIARVDLFKVSGHWQNYREDMFPMMADGDAERAAEQGFVMKPMNCPFHIQIYKDQLRS 310

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YRELP+RLAEFG+VYR E SG L GL RVRGFT DD+H+F T +Q+  E   + +LI+++
Sbjct: 311 YRELPIRLAEFGTVYRYEQSGELGGLTRVRGFTVDDSHLFVTPDQLEAEFFNVVDLILTV 370

Query: 415 YKDFGFEKIMVKLSTRPEK---RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
           +K    +    +LS R       +GSD +W+ A+N ++  +  +       ++     GE
Sbjct: 371 FKSLQLKNFKARLSFRDPNSDKYIGSDEVWEKAQNAIRKAVTKL------DMDYFEAEGE 424

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
            AFYGPK ++I +D + R+WQ GT+QVD+NLP RF   YV  H ++  P+MIHRA FGS+
Sbjct: 425 AAFYGPKLDFIFQDVLEREWQLGTVQVDYNLPERFELEYVTEHGDRQRPIMIHRAPFGSL 484

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           ER IGI+IE + G+ PLWL+P Q  +  ++    +YA+E A  L++  +    D   E +
Sbjct: 485 ERLIGILIEEYAGDFPLWLAPEQVRILPVSDEFYDYAKEQAAKLQAMGIRAVADASGERL 544

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
              IR    +KIP++ I G KE    S+ IR   S     + + + I  L + + 
Sbjct: 545 GKLIRNAEKQKIPVMAIAGAKEVEANSLSIRTRASGELGAIPMEEVISRLIEANT 599


>gi|222480176|ref|YP_002566413.1| threonyl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239]
 gi|222453078|gb|ACM57343.1| threonyl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239]
          Length = 649

 Score =  552 bits (1421), Expect = e-155,   Method: Composition-based stats.
 Identities = 240/646 (37%), Positives = 367/646 (56%), Gaps = 20/646 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEI 61
           +D+ +  PDG+  + P  AT  DVA  I   L +  VA  I+G++ +    V +G+ IEI
Sbjct: 8   ADVTVVLPDGAELDVPAGATVEDVAFEIGPGLGRDTVAGKIDGELVEKYATVHDGARIEI 67

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +T +    L V+RHS AH+ A+A+Q + PE  + IGP  ++GFYYD         D+L  
Sbjct: 68  VTDQSDEYLTVLRHSAAHVFAQALQRLHPEATLTIGPPTDEGFYYDVTDVD-LDEDDLDA 126

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE++M EIIA D    ++  S E+A+E++      YK++IL+     E VT Y Q +W D
Sbjct: 127 IEEEMDEIIAADYDIEREVRSREEAKEIYA--DNEYKLQILDEEADDEEVTFYVQDDWQD 184

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LC+GPHV STG++     L +V+ AYWRGD +   L+R+YGTA+ ++ +L ++L   EE+
Sbjct: 185 LCQGPHVESTGEIGATTLL-EVSAAYWRGDEDNDTLTRVYGTAFASESDLKEHLELREEA 243

Query: 242 EKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQV 299
            +RDHRK+ +EM+LF I    G G+  +H  G  + + L ++     ++  YEE+ TP V
Sbjct: 244 LERDHRKIGQEMNLFSIPTVTGPGLPLYHPPGKTVLRELSNFANELNRENGYEEVETPHV 303

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               LW++SGH+++Y+ +MF +   D        + LKPMNCPGH  +F+    SYR+LP
Sbjct: 304 FRTELWKKSGHYENYKDDMFLLDVND------EEYGLKPMNCPGHATIFDQQSWSYRDLP 357

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
            R  E G VYR E  G L GL RV  FT DD H+F   +Q+  E   +  +I  + +   
Sbjct: 358 QRYFENGKVYRKEQRGELSGLSRVWSFTIDDGHLFVRPDQIRQEIESVIEMIFEVVETLD 417

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
              + V L+TRP+K VG D +W+ AE  ++ VL++            V  G+GAFYGPK 
Sbjct: 418 L-DVEVALATRPDKSVGGDEIWESAEEQLRDVLES------GGYEYDVEPGDGAFYGPKI 470

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           ++  +DA+GR W   T+Q+DFN+P RF+  Y    +E   PVMIHRA++GS ERF  ++I
Sbjct: 471 DFGFEDALGRVWDGPTVQLDFNMPDRFDLTYTGEDNEDHQPVMIHRALYGSYERFFMVLI 530

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E+F G+ PLWL+P Q  +  ++   + YA  + N L+     +E + R+ T+  KIR   
Sbjct: 531 EHFDGDFPLWLAPEQVRILPVSDETLGYAHRVKNELEDAGFRVEVEDRDWTVGRKIRAGH 590

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
             ++P ++I G+ E    ++ +R         V L   +  L  E 
Sbjct: 591 DDRLPYMVIVGEDEQEAGTVSVRDRFENQRGDVDLDAFVDHLVAER 636


>gi|297297312|ref|XP_001086926.2| PREDICTED: probable threonyl-tRNA synthetase 2, cytoplasmic-like
           [Macaca mulatta]
          Length = 708

 Score =  552 bits (1421), Expect = e-155,   Method: Composition-based stats.
 Identities = 230/645 (35%), Positives = 339/645 (52%), Gaps = 49/645 (7%)

Query: 5   IKLTFPDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           I +   DG          T   VA  IS+ LA+  V   +NG++ DL  P+  + S+E++
Sbjct: 94  ITVRVTDGQTVQGEVWKTTPYQVAAEISQELAESTVIAKVNGELWDLDRPLEGDSSLELL 153

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQ 121
           T ++  + AV  HS AHI+ EA++  +    +  GP IE+GFYYD   E +  SS EL+ 
Sbjct: 154 TFDNEEAQAVYWHSSAHILGEAMELYYGGH-LCYGPPIENGFYYDMFIEDRAVSSTELSA 212

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +E   + II    PF +  +S E   E+F+     +K  IL         T+YR G   D
Sbjct: 213 LENICKAIIKEKQPFERLEVSKEILLEMFKY--NKFKCRILNEKVDTATTTVYRCGPLID 270

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LC+GPHVR TG++K   K+ K +  YW G+     L RIYG ++   + +  +  F EE+
Sbjct: 271 LCKGPHVRHTGKIKTI-KIFKNSSTYWEGNPEMETLQRIYGISFPDNKMMRNWEKFQEEA 329

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVL 300
           + RDHRK+ +E +LF   +   G  F+  +G  I+ TL+ ++R +    D+ E+ +P + 
Sbjct: 330 KNRDHRKIGKEQELFFFHDLSPGSCFFLPRGAFIYNTLMDFIREEYHKRDFTEVLSPNMY 389

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  LW+ SGHW  Y  NMF  +   DT      FALKPMNCPGH  +F H  +S+RE+P+
Sbjct: 390 NSKLWEASGHWQHYSENMFTFEIEKDT------FALKPMNCPGHCLMFAHRPRSWREMPM 443

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R A+FG ++RNE SG+L GL RVR F QDDAH+FCT EQ+  E       + S+Y  FGF
Sbjct: 444 RFADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCTVEQIEEEIKGCLQFLQSVYSTFGF 503

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
              +  LSTRPE  +G   +W++AE                                K  
Sbjct: 504 SFQLN-LSTRPENFLGEIEMWNEAE--------------------------------KXX 530

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIGIMI 539
                AIGR  QC TIQ+DF LP RFN  YV+    +K  PV+IHRA+ GS+ER I I+ 
Sbjct: 531 XXXXXAIGRYHQCATIQLDFQLPIRFNLTYVSKDGDDKKRPVIIHRAILGSVERMIAILS 590

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FRNETINYKIREH 598
           EN+ G  P WLSP Q +V  +  +  +YA ++++         + D   N T+N KIR  
Sbjct: 591 ENYGGKWPFWLSPRQVMVIPVGPTCEKYALQVSSEFFEEGFMADVDLDHNCTLNKKIRNA 650

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            + +   I++ G+KE    ++ +R   +    ++ +  AI  L  
Sbjct: 651 QLAQYNFILVVGEKEKINNAVNVRTRDNKIHGEILVTSAIVKLKN 695


>gi|302497531|ref|XP_003010766.1| hypothetical protein ARB_03468 [Arthroderma benhamiae CBS 112371]
 gi|291174309|gb|EFE30126.1| hypothetical protein ARB_03468 [Arthroderma benhamiae CBS 112371]
          Length = 764

 Score =  552 bits (1421), Expect = e-155,   Method: Composition-based stats.
 Identities = 230/689 (33%), Positives = 357/689 (51%), Gaps = 66/689 (9%)

Query: 4   DIKLTFP--DG---SIKNFPVHATGSDVAESISRSLAKKAVAVAING-KVCDLSDPVR-E 56
           DI +T    DG   ++     H+T     + I + L+   V   ++G ++ DL  P+  +
Sbjct: 80  DITVTLEVGDGAPSTVIAQAWHSTPGSFLKDIPKELSSSVVIAKLDGKELWDLDRPLERD 139

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ--PF 114
             I  +  +      V  HS AH + EA +  +    ++ GP    GF+YD    +    
Sbjct: 140 CRIRYLPFDSVEGREVFWHSSAHALGEACECQY-GCLLSHGPPTAQGFFYDMAIPEGGVV 198

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
           +  +   ++ K  +I      F +  +S E  +++F   K  YK+  ++++   E+ T+Y
Sbjct: 199 TQADYPSLDAKTAKIFKEKQSFDRLEVSKENLKKMFGYSK--YKLHYIDNLIEGESSTVY 256

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
           R G   DLCRGPH+++TG++K   K+ + + AY+ GD     L RI G A+  ++ L ++
Sbjct: 257 RCGTLVDLCRGPHIQNTGKIK-AMKITQNSSAYFLGDQTNDALQRIRGVAFPDKKLLQEH 315

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEE 293
           L FLEE+EKR+H K+ +E +LF   E   G  F    G KIF  L   +R + +   Y+E
Sbjct: 316 LKFLEEAEKRNHLKIGKEQELFFFDEVSPGCPFLLPNGTKIFNALQKLLRTEYRKRGYQE 375

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           + +P + D  +W+QSGHW  Y+ +MF +        + R +ALKPMNCPGH  +F H  +
Sbjct: 376 VQSPNMYDVGIWRQSGHWAHYKDDMFKLDV------EKRDWALKPMNCPGHCIMFGHRER 429

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYRELP+R+A+FG ++RNE SG+LHGL RVR F QDD H+FCT  Q+  E   + + + +
Sbjct: 430 SYRELPLRMADFGVLHRNEASGALHGLTRVRKFQQDDTHIFCTDNQIMEEIEGLFDFLRA 489

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           IY  FGF    +KLSTRPEK +G    WD AE  ++  L   K +     +  +  G+GA
Sbjct: 490 IYGLFGF-SFKLKLSTRPEKYLGKLETWDFAEAQLREALTKFKGA-----DWEIDEGDGA 543

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC--------------- 518
           FYGPK +  + DA+ R+ QC TIQ+D+ LP  F   Y+   +                  
Sbjct: 544 FYGPKIDITISDALKREHQCATIQLDYQLPLNFKLEYMTGEAVPKSAAPATSKAEAKPAE 603

Query: 519 ---------------------HPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIV 557
                                 PV+IHRA+ GS ERF GI+IE+F G  P WLSP Q ++
Sbjct: 604 GDSNPAQAQPSDSSTPGPGRARPVVIHRAIIGSFERFFGILIEHFGGKWPFWLSPRQILI 663

Query: 558 TTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASER 617
             + +SA +Y +E+  +L+   L+++ D    T+  KIR   + +   I + G +E   R
Sbjct: 664 VPVMASANDYVEELQEILRGDKLNVDIDLSGHTMQKKIRNGQLAQYNFIFVVGAQEKESR 723

Query: 618 SIGIRRFGSTTTQK----VSLLDAIPILT 642
           S+ IR     ++Q     V L +A   L 
Sbjct: 724 SVNIRNRDDPSSQTKGSLVPLEEARAKLR 752


>gi|225352131|ref|ZP_03743154.1| hypothetical protein BIFPSEUDO_03746 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225157378|gb|EEG70717.1| hypothetical protein BIFPSEUDO_03746 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 677

 Score =  552 bits (1421), Expect = e-154,   Method: Composition-based stats.
 Identities = 245/670 (36%), Positives = 364/670 (54%), Gaps = 44/670 (6%)

Query: 1   MPSD-IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI 59
           M    I +T  +G  K      TG  +         K  +AV +NG+  DL   + +G +
Sbjct: 1   MAEQTISITL-NGEAKEVAADQTGVQLFAE-----DKNIIAVRLNGEPRDLYTELHDGDV 54

Query: 60  -EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
            E I  +    LA++RHS  H+MA+AVQ I P+ ++ +GP+I+DGFYYDFD E PF+ D+
Sbjct: 55  VEPIALDSEDGLAIMRHSATHVMAQAVQEIRPDAKLGVGPVIKDGFYYDFDVETPFTPDD 114

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPA----------- 167
           L +IEK+MQ II     F ++ ++ E+A    E   + YK+E+++   A           
Sbjct: 115 LKEIEKRMQRIIKSSQSFRRRVVTEEEALA--EESDQPYKIELIKDKEAHLDPEAATEIS 172

Query: 168 KENVTLYRQGE------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIY 221
            + ++ Y   +      W DLCRGPH+ +T  +K F K+ + A AYWRG    PML RIY
Sbjct: 173 GKELSFYDNVDRDGNVVWKDLCRGPHLPNTRYIKAF-KIERSAAAYWRGSEANPMLQRIY 231

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLI 280
           G A+ T+++L  Y   LEE+ KRDHRKL  EMDLF   ++ G G+  +H KG  +   + 
Sbjct: 232 GAAFATKEDLKAYQTRLEEAAKRDHRKLGAEMDLFSFPDEIGPGLAVFHPKGAAVINAME 291

Query: 281 SYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT-------IKDLR 332
            Y R    K  Y  + TP +    L++ SGH   Y+  M+     D+        +K   
Sbjct: 292 DYSREMHRKHHYSFVQTPHITKGGLYETSGHLHWYKDGMYPAMRLDEEKDENGNVVKQGF 351

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
            + LKPMNCP H  +F    +SYRELP+RL EFG+VYR E SG +HGL RVRG TQDD+H
Sbjct: 352 DYYLKPMNCPMHNLIFKSRQRSYRELPLRLFEFGTVYRYEKSGEVHGLTRVRGLTQDDSH 411

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGV 451
           ++CT+EQM +E   +   ++ + KDFG +   ++LST+     VGSD +W++A N +  V
Sbjct: 412 IYCTREQMKDELKNLLTFVLGLLKDFGLDDFYLELSTKDPHKYVGSDEIWEEATNTLAEV 471

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
                   +  +         AFYGPK     +DAIGR WQ  TIQ+DFNLP RF   Y+
Sbjct: 472 AK------ESGLELVDDPCGAAFYGPKISVQARDAIGRTWQVSTIQLDFNLPERFGLEYI 525

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
            +      PVMIHRA+FGSIERF  +++E++ G  P WL+P+Q +   +      + Q+ 
Sbjct: 526 AADGTHQRPVMIHRALFGSIERFFAVLLEHYAGAFPAWLAPVQVLGVPVADEFAPHLQQF 585

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
              L+   +  E D  ++    KIR  S  K+P I+I G+++ +  ++  R    +    
Sbjct: 586 IASLEEETVRCEIDMSDDRFGKKIRNASKSKVPFILIVGEEDMNNNAVSFRFRDGSQLNG 645

Query: 632 VSLLDAIPIL 641
           V + +A   +
Sbjct: 646 VPVDEAKAQI 655


>gi|322495387|emb|CBZ30691.1| putative threonyl-tRNA synthetase [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 787

 Score =  552 bits (1421), Expect = e-154,   Method: Composition-based stats.
 Identities = 231/746 (30%), Positives = 362/746 (48%), Gaps = 113/746 (15%)

Query: 1   MPSDIKLTFPDGSIKNFPVHAT-GSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGS 58
           M + IK++ PDG + +     T   D+A  +S SL  K +   +N  + DL+ P   +  
Sbjct: 43  MKAPIKVSLPDGKVMDAESWVTCPRDIARRLSNSLPDKVIVARVNEALWDLTRPFEADCQ 102

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSD 117
           +E++  +D  +  V  HS +H++  A++ I+ + ++++GP +E+G F+Y+    +P S  
Sbjct: 103 LELLDWDDKDAREVFWHSSSHVLGYALERIF-DTKLSVGPALEEGGFFYEGLTNRPVSES 161

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +   IE  MQE++ +  P+ +  +S E A  LF   +   K+ +   +P   + T+YR G
Sbjct: 162 DYKAIESAMQELVKQKMPYQRLEVSKEDALRLFGYTEFKSKI-LASKVPDGGSCTVYRCG 220

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
              D CRGPH+  TG+VK F  + K + +Y+ G +   +L R+YG ++     LT++   
Sbjct: 221 MLIDPCRGPHLPDTGRVKAF-AVTKNSSSYFEGKAENEVLQRVYGISFPKNPMLTEWKMI 279

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
            EE+ KRDHR + R+ +LF+  E   G  FW   G +I+ TL+ ++R+K +   ++E+ +
Sbjct: 280 QEEAAKRDHRVIGRQQNLFNFHEVSPGSAFWLPHGARIYNTLVEFLRKKYRCCGFQEVIS 339

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +    LW  SGHW+ Y  NMF  KC      +   F LKPMNCPGH  +F     SY+
Sbjct: 340 PNMYSSKLWMVSGHWEKYADNMFCTKC------EKEDFGLKPMNCPGHCIMFASQPHSYK 393

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ELP+R A+FG ++RNE SG+L GL RVR F QDDAH+FC  +Q+ +E       +  +Y 
Sbjct: 394 ELPIRYADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCRMDQITDEMEGQMQFLSDVYG 453

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTI--------------------- 455
             GF K     STRP  ++GSDALWD +E+ ++  L+                       
Sbjct: 454 VLGF-KFYFYHSTRPANKLGSDALWDQSESYLRTALNRFCGIPEELPDPLHPDQRFHYDG 512

Query: 456 ------------------------KNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDW 491
                                   K  +          G+GAFYGPK + +++DA+ R  
Sbjct: 513 KPDSVKKMKMLMKKAERSEDPNAWKGPTNGSEGWIENAGDGAFYGPKIDIVVEDALRRRH 572

Query: 492 QCGTIQVDFNLPSRFNAFY-------------------------------VNSHSEKCHP 520
           QC TIQ+DFNLPSRF   Y                               V     K  P
Sbjct: 573 QCATIQLDFNLPSRFGLKYTLPTAEKDEATVGPTEKRRHADPASTASSPAVAEGESKPKP 632

Query: 521 -----------------------VMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIV 557
                                  VMIHRA+ GS+ER I I+ E+F G+ P WLSP Q +V
Sbjct: 633 GTYEAAVRDLGIDLELDANQARPVMIHRAILGSLERSIAILCEHFGGDWPFWLSPRQVMV 692

Query: 558 TTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASER 617
             +++S  EY+Q++ + +       + D    T++ KIR     +   I++ G +E    
Sbjct: 693 VPVSASNYEYSQQVRDTMHDAGFHADVDNGAATLDKKIRNAEKARYNFILVVGQQEQDAT 752

Query: 618 SIGIRRFGSTTTQKVSLLDAIPILTK 643
            + IR  G       SL +A+    +
Sbjct: 753 GVNIRARGERRLGNKSLEEALQWFKE 778


>gi|297663737|ref|XP_002810324.1| PREDICTED: LOW QUALITY PROTEIN: threonyl-tRNA synthetase,
           mitochondrial-like [Pongo abelii]
          Length = 719

 Score =  552 bits (1421), Expect = e-154,   Method: Composition-based stats.
 Identities = 226/670 (33%), Positives = 350/670 (52%), Gaps = 29/670 (4%)

Query: 2   PSDIKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           P  IK++ P G  I     + T   +A  IS +LA  AVA  +NG+  DL  P+  +  +
Sbjct: 58  PRTIKISLPGGQKIDAVAWNTTPYQLARQISSTLADTAVAAQVNGEPYDLERPLETDSDL 117

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD--KEQPFSSD 117
             +T + P   AV  HS  H++  A +  +    +  GP  E GFY+DF   KE+     
Sbjct: 118 RFLTFDSPEGKAVFWHSSTHVLGAAAEQ-FLGAVLCRGPSTEYGFYHDFFLGKERTIRGS 176

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           EL  +E+  QE+ A   PF     +          +   +K+ ++E        T+Y  G
Sbjct: 177 ELPVLERICQELTAAAQPFPGGLEAFTD-LPSTFFQDNPFKLHLIEERVTGPTATVYGCG 235

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
              DLC+GPH+R TGQ+     L   +  +    +    L R+ G ++ T + L  +  +
Sbjct: 236 TLVDLCQGPHLRHTGQIGGLKLLSNSSSLWRSSGAPET-LQRVSGISFPTTELLRAWEAW 294

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINT 296
            EE+E RDHR++ +E +LF   E   G  F+  +G +++  L++++R +  +  + E+ T
Sbjct: 295 REEAELRDHRRIGKEQELFFFHELSPGSCFFLPRGTRVYNALVAFIRAEYARRGFSEVKT 354

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCA----------DDTIKDLRT-FALKPMNCPGHV 345
           P +    LW+QSGHW+ Y+ +MFAV+            DD+ + +    ALKPMNCP H 
Sbjct: 355 PTLFSTKLWKQSGHWEHYQEDMFAVQPPGSDRPPSSQSDDSTRHITDTLALKPMNCPAHC 414

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +F H  +S+RELP+RLA+FG+++R E SG L GL R+R F QDDAH+FCT +Q+  E  
Sbjct: 415 LMFAHRPRSWRELPLRLADFGALHRAEASGGLGGLTRLRCFQQDDAHIFCTTDQLEAEIQ 474

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
              + + S+Y   GF   +  LSTRP   +G   LWD AE ++K  L             
Sbjct: 475 SCLDFLRSVYAVLGFSFHLA-LSTRPSGFLGDPCLWDQAEQVLKQALKEFGEPWD----- 528

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
            +  G+GAFYGPK +  L DA+GR  QCGTIQ+DF LP RF+  Y         PV+IHR
Sbjct: 529 -LNSGDGAFYGPKIDVHLHDALGRPHQCGTIQLDFQLPLRFDLQYKGQAGALERPVLIHR 587

Query: 526 AVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD 585
           AV GS+ER +G++ E+  G  PLWLSP Q +V  + +   EYA+E    L++  L  + D
Sbjct: 588 AVLGSVERLLGVLAESCGGKWPLWLSPFQVVVIPVGTEQEEYAKEAQQSLRAAGLVSDLD 647

Query: 586 -FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK- 643
                T++ ++R   +       + G KE S+R++ IR   +    +  L +A+  L + 
Sbjct: 648 ADSGLTLSRRVRRAQLAHYNFQFVVGQKEQSKRTVNIRTRDNRRLGEWDLPEAVQRLVEL 707

Query: 644 -ESLPPDCQK 652
             +  P+ ++
Sbjct: 708 QNTRVPNAEE 717


>gi|327308738|ref|XP_003239060.1| threonyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
 gi|326459316|gb|EGD84769.1| threonyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
          Length = 764

 Score =  551 bits (1420), Expect = e-154,   Method: Composition-based stats.
 Identities = 230/689 (33%), Positives = 357/689 (51%), Gaps = 66/689 (9%)

Query: 4   DIKLTFP--DG---SIKNFPVHATGSDVAESISRSLAKKAVAVAING-KVCDLSDPVR-E 56
           DI +T    DG   ++     H+T     + I + L+   V   ++G ++ DL  P+  +
Sbjct: 80  DITVTLEVGDGAPSTVIAQAWHSTPGSFLKDIPKELSSSVVIAKLDGKELWDLDRPLERD 139

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ--PF 114
             I  +  +      V  HS AH + EA +  +    ++ GP    GF+YD    +    
Sbjct: 140 CRIRYLPFDSVEGREVFWHSSAHALGEACECQY-GCLLSHGPPTAQGFFYDMAIPEGGVV 198

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
           +  +   ++ K  +I      F +  +S E  +++F   K  YK+  ++++   E+ T+Y
Sbjct: 199 TQADYPLLDAKTAKIFKEKQSFDRLEVSKENLKKMFGYSK--YKLHYIDNLIEGESSTVY 256

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
           R G   DLCRGPH+++TG++K   K+ + + AY+ GD     L RI G A+  ++ L ++
Sbjct: 257 RCGTLVDLCRGPHIQNTGKIK-AMKITQNSSAYFLGDQTNDALQRIRGVAFPDKKLLQEH 315

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEE 293
           L FLEE+EKR+H K+ +E +LF   E   G  F    G KIF  L   +R + +   Y+E
Sbjct: 316 LKFLEEAEKRNHLKIGKEQELFFFDEVSPGCPFLLPNGTKIFNALQKLLRTEYRKRGYQE 375

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           + +P + D  +W+QSGHW  Y+ +MF +        + R +ALKPMNCPGH  +F H  +
Sbjct: 376 VQSPNMYDVGIWRQSGHWAHYKDDMFKLDV------EKRDWALKPMNCPGHCIMFGHRER 429

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYRELP+R+A+FG ++RNE SG+LHGL RVR F QDD H+FCT  Q+  E   + + + +
Sbjct: 430 SYRELPLRMADFGVLHRNEASGALHGLTRVRKFQQDDTHIFCTDNQIMEEIEGLFDFLRA 489

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           IY  FGF    +KLSTRPEK +G    WD AE  ++  L   K +     +  +  G+GA
Sbjct: 490 IYGLFGF-SFKLKLSTRPEKYLGKLETWDFAEAQLREALTKFKGA-----DWEIDEGDGA 543

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC--------------- 518
           FYGPK +  + DA+ R+ QC TIQ+D+ LP  F   Y+   +                  
Sbjct: 544 FYGPKIDITISDALKREHQCATIQLDYQLPLNFKLEYMTGETVPKSAAPATSKAEAKPAE 603

Query: 519 ---------------------HPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIV 557
                                 PV+IHRA+ GS ERF GI+IE+F G  P WLSP Q ++
Sbjct: 604 GDSNPAQAQPSDSSTPGPGRARPVVIHRAIIGSFERFFGILIEHFGGKWPFWLSPRQILI 663

Query: 558 TTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASER 617
             + +SA +Y +E+  +L+   L+++ D    T+  KIR   + +   I + G +E   R
Sbjct: 664 VPVMASANDYVEELQEILRGDKLNVDIDLSGHTMQKKIRNGQLAQYNFIFVVGAQEKESR 723

Query: 618 SIGIRRFGSTTTQK----VSLLDAIPILT 642
           S+ IR     ++Q     V L +A   L 
Sbjct: 724 SVNIRNRDDPSSQTKGSLVPLEEARAKLR 752


>gi|326477787|gb|EGE01797.1| threonyl-tRNA synthetase [Trichophyton equinum CBS 127.97]
          Length = 763

 Score =  551 bits (1420), Expect = e-154,   Method: Composition-based stats.
 Identities = 229/688 (33%), Positives = 357/688 (51%), Gaps = 65/688 (9%)

Query: 4   DIKLTFP--DG---SIKNFPVHATGSDVAESISRSLAKKAVAVAING-KVCDLSDPVR-E 56
           DI +T    DG   ++     H+T     + I + L+   V   ++G ++ DL  P+  +
Sbjct: 80  DITVTLEVGDGAPSTVIAQAWHSTPGSFLKDIPKELSSSVVIAKLDGKELWDLDRPLERD 139

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ--PF 114
             I  +  +      V  HS AH + EA +  +    ++ GP    GF+YD    +    
Sbjct: 140 CRIRYLPFDSVEGREVFWHSSAHALGEACECQY-GCLLSHGPPTAQGFFYDMAIPEGGVV 198

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
           +  +   ++ K  +I      F +  +S E  +++F   K  YK+  ++++   E+ T+Y
Sbjct: 199 TQADYPLLDAKTAKIFKEKQSFDRLEVSKENLKKMFGYSK--YKLHYIDNLVEGESSTVY 256

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
           R G   DLCRGPH+++TG++K   K+ + + AY+ GD     L RI G A+  ++ L ++
Sbjct: 257 RCGTLVDLCRGPHIQNTGKIK-AMKITQNSSAYFLGDQTNDALQRIRGVAFPDKKLLQEH 315

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEE 293
           L FLEE+EKR+H K+ +E +LF   E   G  F    G KIF  L   +R + +   Y+E
Sbjct: 316 LKFLEEAEKRNHLKIGKEQELFFFDEVSPGCPFLLPNGTKIFNALQKLLRTEYRKRGYQE 375

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           + +P + D  +W+QSGHW  Y+ +MF +        + R +ALKPMNCPGH  +F H  +
Sbjct: 376 VQSPNMYDVGIWRQSGHWAHYKDDMFKLDV------EKRDWALKPMNCPGHCIMFGHRER 429

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYRELP+R+A+FG ++RNE SG+LHGL RVR F QDD H+FCT  Q+  E   + + + +
Sbjct: 430 SYRELPLRMADFGVLHRNEASGALHGLTRVRKFQQDDTHIFCTDNQIMEEIEGLFDFLRA 489

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           IY  FGF    +KLSTRPEK +G    WD AE  ++  L   K +     +  +  G+GA
Sbjct: 490 IYGLFGF-SFKLKLSTRPEKYLGKLETWDFAEAQLREALTKFKGA-----DWEIDEGDGA 543

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC--------------- 518
           FYGPK +  + DA+ R+ QC TIQ+D+ LP  F   Y+   +                  
Sbjct: 544 FYGPKIDITISDALKREHQCATIQLDYQLPLNFKLEYMTGETIPKSAAPANPKAEAKPEG 603

Query: 519 --------------------HPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVT 558
                                PV+IHRA+ GS ERF GI+IE+F G  P WLSP Q ++ 
Sbjct: 604 DSNPTQAQPSDSSTPGPGRARPVVIHRAIIGSFERFFGILIEHFGGKWPFWLSPRQILIV 663

Query: 559 TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERS 618
            + +SA +Y +E+  +L+   L+++ D    T+  KIR   + +   I + G +E   RS
Sbjct: 664 PVMASANDYVEELQEILRGDKLNVDIDLSGHTMQKKIRNGQLAQYNFIFVVGAQEKESRS 723

Query: 619 IGIRRFGSTTTQK----VSLLDAIPILT 642
           + IR     ++Q     + L +A   L 
Sbjct: 724 VNIRNRDDPSSQTKGSLIPLEEARAKLR 751


>gi|294941858|ref|XP_002783275.1| threonyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
 gi|239895690|gb|EER15071.1| threonyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
          Length = 908

 Score =  551 bits (1420), Expect = e-154,   Method: Composition-based stats.
 Identities = 236/746 (31%), Positives = 367/746 (49%), Gaps = 120/746 (16%)

Query: 1   MPSD-IKLTFPDGSIKNFPV-HATGSDVAESISRSLAKKAVAVAI--------------- 43
           +P D I +  PDG+ K       T  D+A  IS+ LA   VA  I               
Sbjct: 58  LPKDPITIVLPDGTQKEGRKFETTPLDIAIGISKGLANSVVAAKILYTEPVDSMDQVVAA 117

Query: 44  ---------------NGK---------------VCDLSDPVR-EGSIEIITPEDPRSLAV 72
                          + +               V DLS P+     +E++  + P     
Sbjct: 118 DDESDVGSDAGDEGSDDEEEAHVNTVKAWQKETVWDLSRPLEGSCKLELLKFDSPEGKDT 177

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQIEKKMQEIIA 131
             HS AHI+ EA++  +    + IGP +E+GFYYD F        ++  +IEK++  I+ 
Sbjct: 178 FWHSSAHILGEAMEQEY-GCYLTIGPPLENGFYYDGFFGNLKLGPNDYEKIEKRIDSIVK 236

Query: 132 RDSPFLKQYLSHEKARELFESKKEAYKVEILE-SIPAKENVTLYRQGEWFDLCRGPHVRS 190
            D  F +  ++ E+A ELF      +K++++   +P     ++YR G   DLCRGPH+  
Sbjct: 237 SDQKFQRLVVTKEEALELFAY--NPFKLQLISTKVPDGSLTSVYRIGSLVDLCRGPHLPR 294

Query: 191 TGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLA 250
           TG  K F+   K + AYW G +    L R+Y  ++ T++ L +Y   +EE+ KRDHR + 
Sbjct: 295 TGIAKAFWVN-KNSQAYWLGKAENDSLQRVYAISFPTEKMLKEYKRNVEEAMKRDHRLIG 353

Query: 251 REMDLFHIAEDGSG-VIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQS 308
           ++ DLF      S    FW   G  I+  L+ ++RR+ +   ++E+ TP +  + L+QQS
Sbjct: 354 KKQDLFFFHPTMSPGSCFWTSHGAVIYNKLVDFIRREYRLRGFDEVITPNIFSEALFQQS 413

Query: 309 GHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV 368
           GH  +Y+ NM+++    +T      + LKPMNCPGH  +F+  ++SY+ELP+R+A+FG +
Sbjct: 414 GHCGNYKDNMYSMNIEGET------WFLKPMNCPGHCMIFDQKVRSYKELPIRMADFGVL 467

Query: 369 YRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLS 428
           +RNE SG+L GL RVR F QDDAH+FC  +Q+ +E +     +  +Y  FGF+  +  LS
Sbjct: 468 HRNELSGTLSGLTRVRRFQQDDAHIFCRPDQVQDEIVHALEFLKFVYNTFGFDFSVC-LS 526

Query: 429 TRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIG 488
           TRP+K +GS A+WD AE+ +K  L+         I+  +  G+GAFYGPK +  L+DA+ 
Sbjct: 527 TRPKKAIGSRAIWDTAESGLKNALEACG------IDYDLNPGDGAFYGPKIDIRLRDALN 580

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEK------------------------------- 517
           R  QCGTIQ+DFNLP RFN  Y  + +E+                               
Sbjct: 581 RYHQCGTIQLDFNLPIRFNLQYRIAETEESGDAHAASEAANSPVNDQQKGSTQSSAAVEN 640

Query: 518 -------------------CHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVT 558
                                PVMIHRA+ GSIER   I+ E+F G  P WLSP Q +V 
Sbjct: 641 VGSKAKADEITLGELRHGFERPVMIHRAILGSIERCTAILTEHFGGKWPFWLSPRQVMVV 700

Query: 559 TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERS 618
            ++    +YA  +   L       + D    T+N K+RE  +     I + G+KE ++ +
Sbjct: 701 PVSDKYSDYADYVRKQLVRLGYEADADLSTRTMNKKVREAQVAAFNYIAVVGEKEQNDLT 760

Query: 619 IGIRRFGS-TTTQKVSLLDAIPILTK 643
           + +R+  +        + +   +  K
Sbjct: 761 VTLRKRDTARPLGTFGIREMFDMFEK 786


>gi|219113189|ref|XP_002186178.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|209583028|gb|ACI65648.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 684

 Score =  551 bits (1420), Expect = e-154,   Method: Composition-based stats.
 Identities = 268/604 (44%), Positives = 365/604 (60%), Gaps = 29/604 (4%)

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE----------- 111
           T ++   L  IRHS AH+MA AVQ I+PE QV IGP I+ GFYYDF              
Sbjct: 75  TNDNDEELLRIRHSSAHVMAMAVQRIFPEAQVTIGPWIDSGFYYDFFFPERTDEESGETI 134

Query: 112 --QPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKE 169
             +  S  +L  ++K M +II +D P  ++ +S E+AR   E   E +K+EIL+SI   E
Sbjct: 135 PARKLSEQDLKDVKKAMDKIIGKDYPISREDVSREEARRRIEKIGEPFKLEILDSIK-TE 193

Query: 170 NVTLYRQGE-WFDLCRGPHVRSTGQ-VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNT 227
            +TLY  G+ W+DLC GPHV STG+  KK  +L  VAGAYWRGD NR ML RIY TAW  
Sbjct: 194 PITLYHIGDEWWDLCAGPHVDSTGKLPKKAIQLQSVAGAYWRGDENREMLQRIYATAWKD 253

Query: 228 QQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR- 285
            Q+L QY   LEE++KRDHR L +++DLF I ED G G++FWH KG K+ + +  + +  
Sbjct: 254 PQQLKQYKKMLEEAKKRDHRMLGKKLDLFSIQEDAGGGLVFWHPKGSKVRRMIEDFWKDA 313

Query: 286 KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            I+D Y+ + +P + +  LW+ SGH+D YRA+MF     ++       + +KPMNCP H 
Sbjct: 314 HIQDGYDVVYSPHIANIDLWKTSGHFDFYRADMFDQMDVEN-----EQYQIKPMNCPFHC 368

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            ++   L+SYR+LP R AE G+VYR E SG+LHGLMRVRGFTQDDAH+FC  EQ+ +E +
Sbjct: 369 LMYKDELRSYRDLPFRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQLQDEIV 428

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
            + +L  +I   FGF+K  V LSTRPEK VGSD +WD A   ++G L           + 
Sbjct: 429 GVLDLTETILSRFGFDKYDVMLSTRPEKSVGSDEIWDAATVALEGALK------VKGWDY 482

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
            V  G GAFYGPK +  ++DAIGR WQC T+Q DFNLP RF   Y ++   +  P+M+HR
Sbjct: 483 NVDEGGGAFYGPKIDLKIRDAIGRQWQCSTVQCDFNLPERFGLEYASADGTRERPIMVHR 542

Query: 526 AVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD 585
           A+FGSIERF GI+IEN  G+ PLWL+P Q  +  +T +  EY  EIA       L IE D
Sbjct: 543 AIFGSIERFFGILIENCSGDFPLWLAPTQLKLLPVTDAVHEYCNEIAAKALKMGLRIEVD 602

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
             +E +  +IR     +IP++ + G KE    S+ +R           + D +  L + +
Sbjct: 603 RGSERLAKQIRNAEQARIPVMAVVGMKEMESNSLAVRSRKLGDLGSFEVEDLLSELKRCA 662

Query: 646 LPPD 649
              +
Sbjct: 663 AAAE 666


>gi|119513050|ref|ZP_01632106.1| threonyl-tRNA synthetase [Nodularia spumigena CCY9414]
 gi|119462292|gb|EAW43273.1| threonyl-tRNA synthetase [Nodularia spumigena CCY9414]
          Length = 602

 Score =  551 bits (1419), Expect = e-154,   Method: Composition-based stats.
 Identities = 240/594 (40%), Positives = 362/594 (60%), Gaps = 15/594 (2%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSD 117
            I +    +  +L  IRH+ +H+MA AVQ ++P+ QV IGP IE+GFYYDFD  +PFS +
Sbjct: 8   KIYLPRTSESETLKQIRHTASHVMAMAVQKLFPKAQVTIGPWIENGFYYDFDSPEPFSEN 67

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +L  I+K+M +II R  P +++ +S E+A +      E YK+EIL  I  +E +T+Y  G
Sbjct: 68  DLKAIKKEMVKIINRKLPVIREEVSREEAEKRISEIHEPYKLEILGDIK-QEPITIYHLG 126

Query: 178 -EWFDLCRGPHVRSTGQVKK-FFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
            EW+DLC GPHV +T Q+     +L  VAGAYWRGD  +  L RIY TAW + ++L +Y 
Sbjct: 127 NEWWDLCAGPHVENTSQLNPKAIELESVAGAYWRGDETKAQLQRIYATAWESPEQLAEYK 186

Query: 236 YFLEESEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEE 293
              EE+ +RDHRKL +E+ LF  + + G G+  W  KG  +   L  +++  ++K  Y  
Sbjct: 187 RRKEEALRRDHRKLGKELGLFIFSEQVGPGLPLWTPKGTLLRSVLEDFLKKEQLKRGYLP 246

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT-FALKPMNCPGHVAVFNHGL 352
           + TP +    L++ SGHW  Y+ +MF +   D+    L   F LKPMNCP H+ ++   L
Sbjct: 247 VVTPHIARVDLFKTSGHWQKYKEDMFPLMSDDEEAAALEQGFVLKPMNCPFHIQIYKSEL 306

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
           +SYRELP+RLAEFG+VYR E SG L GL RVRGFT DD+H+F T EQ+ +E L + +LI+
Sbjct: 307 RSYRELPIRLAEFGTVYRYEQSGELGGLTRVRGFTVDDSHLFVTPEQLDSEFLNVVDLIL 366

Query: 413 SIYKDFGFEKIMVKLSTRPE---KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL 469
           S++K    +    +LS R     K +GS+ +WD AE  ++  ++ +       +N    +
Sbjct: 367 SVFKSLQLKNFKARLSFRDPASDKYIGSNEVWDKAEGAIRRAVEKLG------MNYFEGI 420

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG 529
           GE AFYGPK ++I  DA+ R+WQ GT+QVD+NLP RF+  YV     +  PVMIHRA FG
Sbjct: 421 GEAAFYGPKLDFIFSDALEREWQLGTVQVDYNLPERFDLEYVAEDGSRQRPVMIHRAPFG 480

Query: 530 SIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE 589
           S+ER IGI+IE + G+ PLWL+P+QA +  +  + +++A+++A  + +  +  E D   +
Sbjct: 481 SLERLIGILIEEYAGDFPLWLAPVQARLLPVGEAQLDFAKDVAAKMVAEGIRAEVDTSGD 540

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +   IR    +KIP++ + G KE    S+ IR   S     + + + +  + +
Sbjct: 541 RLGKIIRNAEKQKIPVMAVIGAKEVESNSLSIRTRASGELGAIPVDEVVDKMKQ 594


>gi|320534417|ref|ZP_08034899.1| threonyl-tRNA synthetase [Actinomyces sp. oral taxon 171 str.
           F0337]
 gi|320133364|gb|EFW25830.1| threonyl-tRNA synthetase [Actinomyces sp. oral taxon 171 str.
           F0337]
          Length = 678

 Score =  551 bits (1419), Expect = e-154,   Method: Composition-based stats.
 Identities = 237/671 (35%), Positives = 352/671 (52%), Gaps = 43/671 (6%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI-EII 62
            I++T  DG+ +     +TG+ + +   +      VA+ +NG+  DL   V  G++ E I
Sbjct: 1   MIEITL-DGAPRTIEAGSTGALLLQDAVK--KDGVVAMRVNGEPWDLERQVPAGAVVEPI 57

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T      L ++RHS  H+MA+AVQ ++P V + IGP I DGFYYDF      + + L +I
Sbjct: 58  TLSSEDGLNILRHSATHVMAQAVQEMFPGVNLGIGPFITDGFYYDFGAIDAVTPEMLREI 117

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-------------- 168
           EK+M+ I+     F+++ ++  +A+   E   + YK+E++ +  A               
Sbjct: 118 EKRMKRIVKEGQRFVRRDIT--EAQGREELADQPYKLELITTKGAGAEGASVEVGAGGLT 175

Query: 169 --ENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWN 226
             +NV       W DLCRGPH+ ST  + + F L K + AYW+GD +   L RIYGTAW 
Sbjct: 176 MYDNVRRDGSVAWTDLCRGPHLPSTRLIGQGFALTKSSSAYWKGDQSGDSLQRIYGTAWA 235

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-R 284
           T+ EL  Y   L E+ KRDHR+L  E+DL+   E+ G G++ +H KG  +   +  Y+  
Sbjct: 236 TKDELKAYQTRLAEAAKRDHRRLGAELDLYSFPEEIGPGLVVFHPKGAMLRHQIEQYVVD 295

Query: 285 RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT-------IKDLRTFALK 337
           R +   ++ ++TP++    L+  SGH   Y   MF    AD+         K  + + LK
Sbjct: 296 RHLDYGFDFVHTPEISKGGLFHTSGHLPYYADTMFPPMLADEERDAEGNITKAGQEYYLK 355

Query: 338 PMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK 397
            MNCP H  VF    +SYRELP+R  E G  YR E SG +HGL R+RGFTQDD+H +CT 
Sbjct: 356 AMNCPMHNLVFRSRGRSYRELPLRFFEMGHDYRYEKSGVVHGLTRMRGFTQDDSHTYCTP 415

Query: 398 EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP------EKRVGSDALWDDAENIMKGV 451
           +Q   E     +  +SI K FG     ++LSTR       +K +GSDA WD A   ++  
Sbjct: 416 DQAGEEIRAQIDFFLSILKAFGLTDFHLELSTRDEEGAKKDKFIGSDADWDAATQALQNA 475

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
            D         +      G  AFYGPK    +KDAIGR WQ  TIQ DFN P RF+  Y 
Sbjct: 476 CDASG------LEVVPDPGGAAFYGPKVSVQVKDAIGRTWQMSTIQYDFNQPERFDLEYT 529

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
            +      P+MIH A  GS+ERFIG++ E++ G  P WLSP+Q  +  +  +   Y  ++
Sbjct: 530 AADGTHQRPIMIHSAKLGSVERFIGVLTEHYAGAFPTWLSPVQVRLIPVAEAFDTYVDDV 589

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
           A  L++  + +E D  ++    KIR  S  KIP  +I G ++A   ++  R      T  
Sbjct: 590 AARLRAKGVRVEVDHSDDRFGKKIRNASKDKIPFTLIAGGEDAEAGAVSFRFRDGQQTNG 649

Query: 632 VSLLDAIPILT 642
           V + +A+  + 
Sbjct: 650 VPVEEAVTHIV 660


>gi|186685902|ref|YP_001869098.1| threonyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
 gi|186468354|gb|ACC84155.1| threonyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
          Length = 611

 Score =  551 bits (1419), Expect = e-154,   Method: Composition-based stats.
 Identities = 236/594 (39%), Positives = 360/594 (60%), Gaps = 15/594 (2%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSD 117
            I +    +  +L  IRH+ +H+MA AVQ ++P+ QV IGP IE+GFYYDFD  +PFS +
Sbjct: 17  KIYLPRTSESENLKKIRHTASHVMAMAVQKLFPKAQVTIGPWIENGFYYDFDSPEPFSEN 76

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +L  I+K+M +II R  P +++ +S E+A    +  KE YK+EIL  I   E +T+Y  G
Sbjct: 77  DLKAIKKEMAKIINRKLPVIREEVSREEAARRIQEIKEPYKLEILADIK-NEPITIYHLG 135

Query: 178 -EWFDLCRGPHVRSTGQVKK-FFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
            EW+DLC GPH+ +  ++     +L  VAGAYWRGD  +  L RIY TAW + ++L +Y 
Sbjct: 136 NEWWDLCAGPHLENISELNPKAIELESVAGAYWRGDETKAQLQRIYATAWESPEQLAEYK 195

Query: 236 YFLEESEKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEE 293
              EE+ +RDHRKL +E+ LF  ++  G G+  W  KG  +  TL  ++ + ++K  Y  
Sbjct: 196 RRKEEALRRDHRKLGKELGLFIFSDLVGPGLPLWTPKGTLLRSTLEDFLKQEQVKRGYLS 255

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK-DLRTFALKPMNCPGHVAVFNHGL 352
           + TP +    L++ SGHW  Y+ +MF +   D+      + F +KPMNCP H+ ++   L
Sbjct: 256 VVTPHIARVDLFKTSGHWQKYKEDMFPLMADDEEAAAQEQGFVMKPMNCPFHIQIYKSEL 315

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
           +SYRELP+RLAEFG+VYR E SG L GL RVRGFT DD+H+F T EQ+ +E L + +LI+
Sbjct: 316 RSYRELPMRLAEFGTVYRYEQSGELGGLTRVRGFTVDDSHLFVTPEQLDSEFLSVVDLIL 375

Query: 413 SIYKDFGFEKIMVKLSTRPE---KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL 469
           S++     +    +LS R     K +GSD +WD AE  ++  ++T+     + I      
Sbjct: 376 SVFNKLQLKNFKARLSFRDPASDKYIGSDEVWDKAEGAIRRAVETLGMEHFEGI------ 429

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG 529
           GE AFYGPK ++I  DA+ R+WQ GT+QVD+NLP RF   YV     +  PVMIHRA FG
Sbjct: 430 GEAAFYGPKLDFIFSDALDREWQLGTVQVDYNLPERFELEYVAEDGVRKRPVMIHRAPFG 489

Query: 530 SIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE 589
           S+ER IGI+IE + G+ PLWL+P+QA +  +  + +++A+++   +++  +  E D   +
Sbjct: 490 SLERLIGILIEEYAGDFPLWLAPVQARLLPVGDTQLDFAKDVVAKMRALGIRAEVDTSGD 549

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +  +IR    +KIP++ + G KE    ++ IR   S     + + + +  +  
Sbjct: 550 RLGKQIRNAEKEKIPVMAVVGAKEVETNTLSIRTRASGELGVIPVDEVVDKMKD 603


>gi|17227831|ref|NP_484379.1| threonyl-tRNA synthetase [Nostoc sp. PCC 7120]
 gi|17129680|dbj|BAB72293.1| threonyl-tRNA synthetase [Nostoc sp. PCC 7120]
          Length = 615

 Score =  550 bits (1418), Expect = e-154,   Method: Composition-based stats.
 Identities = 242/601 (40%), Positives = 362/601 (60%), Gaps = 15/601 (2%)

Query: 51  SDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK 110
           + P +   I +    +  +L  IRH+ +H+MA AVQ ++P+ QV IGP IE+GFYYDFD 
Sbjct: 14  NQPEQPEKIYLPRTSESETLKKIRHTASHVMAMAVQKLFPKAQVTIGPWIENGFYYDFDS 73

Query: 111 EQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN 170
            +PF+  +L  I+K+M +II R  P +++ +S E+A    +  KE YK+EIL  I + E 
Sbjct: 74  PEPFTDKDLKAIQKEMVKIINRKLPVVREEVSREEAERRIQEIKEPYKLEILADIKS-EP 132

Query: 171 VTLYRQG-EWFDLCRGPHVRSTGQVKK-FFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQ 228
           +T+Y  G EW+DLC GPHV +T  +     +L  VAGAYWRGD  +  L RIY TAW T 
Sbjct: 133 ITIYHLGNEWWDLCAGPHVENTKDLNPKAIELESVAGAYWRGDETKAQLQRIYATAWETP 192

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYMR-RK 286
           ++L +Y    EE+ +RDHRKL +E+ LF  + + G G+  W  KG  +  TL  +++  +
Sbjct: 193 EQLAEYKRRKEEALRRDHRKLGKELGLFIFSEQVGPGLPLWTPKGTLLRSTLEQFLQQEQ 252

Query: 287 IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL-RTFALKPMNCPGHV 345
           +K  Y  + TP +    L++ SGHW  Y+ +MF +   D+    + + F LKPMNCP H+
Sbjct: 253 LKRGYLPVVTPHIARVDLFKTSGHWQKYKEDMFPLMAEDEAAAAIEQGFVLKPMNCPFHI 312

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            ++   L+SYRELP+RLAEFG+VYR E SG L GL RVRGFT DD+H+F T EQ+ NE L
Sbjct: 313 QIYKSELRSYRELPMRLAEFGTVYRYEQSGELGGLTRVRGFTVDDSHLFVTPEQLDNEFL 372

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPE---KRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
            + +LI+S++K    +    +LS R     K +GSD +W+ AE  ++  ++ +     + 
Sbjct: 373 NVVDLILSVFKSLQLKNFKARLSFRDPASDKYIGSDEVWNKAEGAIRRAVEQLGMEHFEG 432

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
           I      GE AFYGPK ++I  DA+ R+WQ GT+QVD+NLP RF+  YV     +  PVM
Sbjct: 433 I------GEAAFYGPKLDFIFSDALEREWQLGTVQVDYNLPERFDLEYVAEDGTRKRPVM 486

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSI 582
           IHRA FGS+ER IGI+IE + G+ PLWL+P+QA +  +  + +++ +++   L+S  +  
Sbjct: 487 IHRAPFGSLERLIGILIEEYAGDFPLWLAPVQARLLPVGEAQLDFTKDVVAKLRSLGIRA 546

Query: 583 ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           E D   + +   IR     KIP++ + G KE    S+ IR   S     + + + +  + 
Sbjct: 547 EVDTSGDRLGKLIRNAEKDKIPVMAVVGAKEVETNSLSIRTRASGELGAIPVDEVVQKMK 606

Query: 643 K 643
            
Sbjct: 607 D 607


>gi|111023830|ref|YP_706802.1| threonyl-tRNA synthetase [Rhodococcus jostii RHA1]
 gi|123339593|sp|Q0S1E2|SYT_RHOSR RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|110823360|gb|ABG98644.1| threonine--tRNA ligase [Rhodococcus jostii RHA1]
          Length = 685

 Score =  550 bits (1418), Expect = e-154,   Method: Composition-based stats.
 Identities = 247/659 (37%), Positives = 377/659 (57%), Gaps = 41/659 (6%)

Query: 17  FPVHAT-GSDVAESISRSLAKKAVAVAIN--GKVCDLSD-PVREGSIEIITPEDPRSLAV 72
            P   T G+ V E+   S     V V  +  G++ DLS  P  +  +E +        +V
Sbjct: 15  VPAGTTAGTAVREAGYPSKGPDVVVVVRDAEGQLKDLSWVPDTDVEVEPVAANTDDGRSV 74

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIAR 132
           IRHS AH++A+AVQ  +PE ++ IGP I+DGFYYDF  ++PF+ ++LA +EK+M++II  
Sbjct: 75  IRHSAAHVLAQAVQQEFPEAKLGIGPPIKDGFYYDFAVDRPFTPEDLASLEKRMKKIIKG 134

Query: 133 DSPFLKQYL-SHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE------------- 178
              F ++ + S E AR   E  KE +K+E+++     ++  +   G              
Sbjct: 135 SQRFSRRVVESLEDARA--ELAKEPFKLELIDDKSGIDDPEIMEVGGNELTIYDNLDPRT 192

Query: 179 ----WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
               W DLCRGPH+ +T  +  F KL + + AYWRG+ +   L RIYGTAW + +   Q+
Sbjct: 193 GEKVWGDLCRGPHIPTTKHIPAF-KLTRSSAAYWRGNQDNADLQRIYGTAWESAEAQDQH 251

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYE 292
           L  L E+E+RDHRKL  E+DLF   ++ GSG+  +H +G  I   +  Y R R +++ YE
Sbjct: 252 LELLAEAERRDHRKLGSELDLFSFPDELGSGLPVFHPRGGIIRTEMEDYSRKRHVEEGYE 311

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD-------LRTFALKPMNCPGHV 345
            +NTP +   HL++ SGH D YR  MF     D+ + +        + + LKPMNCP H 
Sbjct: 312 FVNTPHITKGHLYEVSGHLDWYRDGMFPAMHIDEELNEDGTVRKPGQDYYLKPMNCPMHN 371

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +F    +SYRELP+RL EFGSVYR E SG +HGL RVRG TQDDAH++CT+EQM +E  
Sbjct: 372 LIFRSRGRSYRELPLRLFEFGSVYRYEKSGVVHGLTRVRGMTQDDAHIYCTREQMRDELA 431

Query: 406 KIHNLIISIYKDFGFEKIMVKLS-TRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
                ++ + KD+G +   ++LS   P+K VG DA+W++A   +  V ++        +N
Sbjct: 432 TTLQFVLGLLKDYGLDDFYLELSTKNPDKFVGDDAVWEEATATLAEVAESSG------LN 485

Query: 465 TGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIH 524
                G  AFYGPK    ++DA+GR WQ  TIQ+DFNLP RF+  Y  +   K  PVMIH
Sbjct: 486 LVPDPGGAAFYGPKISVQVQDALGRTWQMSTIQLDFNLPERFDLEYTANDGTKQRPVMIH 545

Query: 525 RAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIET 584
           RA+FGSIERF G++ E++ G  P WL+P+Q +   +  +  ++  ++   LK+  +  E 
Sbjct: 546 RALFGSIERFFGVLTEHYAGAFPAWLAPVQVVGIPVAETFADHLFDVVKRLKAAGVRAEV 605

Query: 585 DFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           D  ++ +  KI  ++ +K+P +++ G ++    ++  R    T    V + DA+ I+T+
Sbjct: 606 DASDDRMQKKIFNNTAQKVPFMLLAGARDVEAGAVSFRFRDGTQVNGVPVDDAVRIVTE 664


>gi|330836194|ref|YP_004410835.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Spirochaeta
           coccoides DSM 17374]
 gi|329748097|gb|AEC01453.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Spirochaeta
           coccoides DSM 17374]
          Length = 588

 Score =  550 bits (1418), Expect = e-154,   Method: Composition-based stats.
 Identities = 247/579 (42%), Positives = 363/579 (62%), Gaps = 16/579 (2%)

Query: 67  PRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKM 126
              L  IRHS AH+MAEAV  ++P  Q+AIGP+IE+GFYYDFD  +P   D+L +I ++M
Sbjct: 14  QEKLERIRHSMAHVMAEAVLQMFPTAQIAIGPVIENGFYYDFDLPRPLVKDDLEEITERM 73

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGP 186
           ++IIA D PF++  +S ++AR       + YKVE+L++IPA E+V+LY QG + DLCRGP
Sbjct: 74  KKIIAEDKPFIRTVVSRDEARRR--FSDQKYKVELLDAIPADEDVSLYDQGGFIDLCRGP 131

Query: 187 HVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           HV ST +++   F L+ +AGAYWRG    PML+RIYGTAW   ++L  YL  LE+ EKRD
Sbjct: 132 HVASTKELRSDSFALLNIAGAYWRGKETNPMLTRIYGTAWANPKDLRLYLQHLEDVEKRD 191

Query: 246 HRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQH 303
           +R+L +E DLF + E+ G G+++WH +G ++   + ++ R    K+ YE + +P V    
Sbjct: 192 NRRLGKEQDLFSLHEEAGPGLVYWHPRGARVRVAIENFWRDEHYKNGYEMVFSPHVGRSW 251

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+ SGH   Y+ +M+          D   + +KPMNCP H+ ++N+  +SYR+LP+R+A
Sbjct: 252 LWETSGHLGFYKDSMYPAMEM-----DKSDYYVKPMNCPFHIMIYNNSKRSYRDLPIRMA 306

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           E G+VYR E +G+LHGLMRVRGFTQDDAH+FCT EQM +E  K+    + + + FGF+ +
Sbjct: 307 ELGTVYRYEKAGALHGLMRVRGFTQDDAHLFCTPEQMDDEIRKVLEFSLYMLRSFGFQDV 366

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
              LSTRPE+ VG    WD A   ++  ++      ++ +   V  G GAFYGPK +  +
Sbjct: 367 KAYLSTRPEESVGERERWDAATKALRNAIE------KEGLAYEVDEGGGAFYGPKIDLKV 420

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           KDAIGR+WQ  T+Q DFN+  RF   +V+   ++  P MIHRA+ GSIERF G++IEN+ 
Sbjct: 421 KDAIGREWQLSTVQFDFNMSDRFQMTFVDKDGQEKRPYMIHRALLGSIERFFGVLIENYA 480

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P Q +V  +  +   YA  + + L+   L  + D  ++ +N KIR   + KI
Sbjct: 481 GAFPPWLAPEQIMVVPVGEAFFPYATALRDRLRKEGLRADADLSDDRMNAKIRNAQLHKI 540

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           P  ++ G++E SE  + +R         V   D I  + 
Sbjct: 541 PYQLVVGEREQSEDKVSVRYRNGNKANDVPTADFIAEVK 579


>gi|134098578|ref|YP_001104239.1| threonyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
 gi|291008224|ref|ZP_06566197.1| threonyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
 gi|133911201|emb|CAM01314.1| threonyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
          Length = 674

 Score =  550 bits (1418), Expect = e-154,   Method: Composition-based stats.
 Identities = 245/659 (37%), Positives = 367/659 (55%), Gaps = 41/659 (6%)

Query: 17  FPVHATGSD-VAESISRSLAKKAVAVAIN--GKVCDLSD-PVREGSIEIITPEDPRSLAV 72
            P   T  + V E+   S    AV V  +  G + DLS  P  +  +E +        +V
Sbjct: 3   VPAGTTAGEAVLEAGLPSKGADAVVVVRDHEGALRDLSWAPESDVEVEAVAACTEEGRSV 62

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIAR 132
           IRHS AH++A+AVQ +  E ++ IGP + DGFYYDFD E PF+ ++L  +EK+M++II  
Sbjct: 63  IRHSAAHVLAQAVQQLHAEAKLGIGPPVRDGFYYDFDVEHPFTPEDLQALEKRMKQIIKS 122

Query: 133 DSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENV-------------TLY----R 175
              F ++ L   +A    E   E YK+E+++     + V             T+Y    R
Sbjct: 123 GQKFSRRRLDSVEA-AREELAGEPYKLELVDLKSGSDEVDTSEVMEVGGGDLTVYDNVDR 181

Query: 176 QGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQ 233
            GE  W DLCRGPHV  T  +  F KLM+VA AYWRGD +   L R+YGTAW ++++L +
Sbjct: 182 HGEVVWGDLCRGPHVPHTRYIPAF-KLMRVAAAYWRGDQSNQQLQRVYGTAWESKEKLDE 240

Query: 234 YLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDY 291
           +L  L E+E+RDHR+L  E+DLF   ++ GSG+  +H KG  I + +  Y RR   +  Y
Sbjct: 241 HLELLAEAERRDHRRLGSELDLFSFPDEIGSGLPVFHPKGGIIRKEMEDYSRRRHEQAGY 300

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD-------LRTFALKPMNCPGH 344
           E + +P +    L++ SGH   Y+  MF     D+   +        + + LKPMNCP H
Sbjct: 301 EFVYSPHITKDALFKTSGHLSWYKDGMFPAMHLDEERDEDGEVRKPGQDYYLKPMNCPFH 360

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             ++    +SYRELP+RL EFGSVYR E SG +HGL RVRG TQDDAH++CT EQ+ +E 
Sbjct: 361 NLIYRSRGRSYRELPLRLFEFGSVYRYEKSGVVHGLTRVRGMTQDDAHIYCTPEQLQDEL 420

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             + N ++++ +DFG +   ++LSTR E+  VG D  W  A   ++   ++        +
Sbjct: 421 KSLLNFVLNLLRDFGLDDFYLELSTRNEEKYVGDDESWRVATEALREAAESSG------L 474

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
                 G  AFYGPK     KDA+GR WQ  TIQVD++LP RF   Y +S   +  P+ I
Sbjct: 475 ELVPDPGGAAFYGPKISVQAKDALGRTWQMSTIQVDYHLPDRFELEYTSSDGSRQRPIKI 534

Query: 524 HRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIE 583
           HRA+FGSIERF G++ E++ G  P WL+P+Q +   I    +++   +A  L++  + +E
Sbjct: 535 HRALFGSIERFFGVLTEHYAGAFPAWLAPVQVVGIPIADEHLDHLDRVAKALRAKGIRVE 594

Query: 584 TDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            D  ++ +  KIR H+ +K+P +++ G K+    ++  R    T    V +  A+  L 
Sbjct: 595 VDASDDRMQKKIRNHTTQKVPFLLLAGGKDVEADAVSFRFRDGTQINGVPVDTAVAALA 653


>gi|169351009|ref|ZP_02867947.1| hypothetical protein CLOSPI_01786 [Clostridium spiroforme DSM 1552]
 gi|169292071|gb|EDS74204.1| hypothetical protein CLOSPI_01786 [Clostridium spiroforme DSM 1552]
          Length = 606

 Score =  550 bits (1417), Expect = e-154,   Method: Composition-based stats.
 Identities = 227/588 (38%), Positives = 367/588 (62%), Gaps = 18/588 (3%)

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDE 118
           ++I  ++   L+V+ HSCAH+MA+A++ ++P+ +  +GP++ +GFYYD D        ++
Sbjct: 29  KMIDFKEDEKLSVLNHSCAHVMAQAIKHLYPQAKFWVGPVVSEGFYYDVDLGNAVIKDED 88

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           + +IEK+M++I       ++Q +S E+A E+F+   + YK++++ +     N++ Y+QG+
Sbjct: 89  IPKIEKEMKKICKDGKRIVRQEISKEEALEMFK--DDEYKIDLINNFENGTNISCYKQGD 146

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + DLCRGPHV +    K F KL K +GAYW+GD N  +L RIYG  + T + L ++L  L
Sbjct: 147 FVDLCRGPHVETVKACKNF-KLTKHSGAYWKGDKNNKVLQRIYGVCFETPEALEEHLNLL 205

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
           EE+++RDH+K+ +E+ LF ++E   G+  +  KG  +  TL  +   +  K+ Y  I TP
Sbjct: 206 EEAKRRDHKKIGKELGLFMMSEYAPGMPIFLPKGMILRNTLEQFWYEEHTKEGYVFIKTP 265

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++ + LW+ SGHW +Y+ +M+          D R FA+KPMNCPG + V+ +GL SY++
Sbjct: 266 IMMSRELWETSGHWANYKDDMYTSMV------DDREFAIKPMNCPGSLLVYKNGLHSYKD 319

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+ E G V+R+E SG+L+GL RVR FTQDDAH+F T +Q+ +E +K+ N I  +Y  
Sbjct: 320 LPLRMGELGQVHRHEASGALNGLFRVRTFTQDDAHIFMTPDQIESEIIKLINFIDRVYNS 379

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
                 +   +   EK +G  A+W+ +E  +               +  +  G+GAFYGP
Sbjct: 380 LNLSYEIELSTRPEEKYIGDLAIWEKSEAALAAACKAAGK------DYKINPGDGAFYGP 433

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K ++ +KD++GR WQCGTIQ+D NLP RF+  Y++   EK  PVM+HR +FGSIERFIGI
Sbjct: 434 KLDFHVKDSLGRVWQCGTIQLDMNLPERFDITYIDDKGEKARPVMLHRVIFGSIERFIGI 493

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +IE+F G  PLWL+P+Q  V  + +   +EYA+E+  LL+   L +E D R E + Y+IR
Sbjct: 494 LIEHFAGVFPLWLAPVQVKVLPVNNEYHLEYAKEVTKLLQEAGLKVEMDAREEKLGYRIR 553

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           E  ++K+P +++ G+ E  E+++  R+ G      V   + + +L KE
Sbjct: 554 EGQMEKVPYLLVLGNNERDEKTVTYRQHGQQKQITVPFDEFVSMLKKE 601


>gi|21672408|ref|NP_660475.1| threonyl-tRNA synthetase [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
 gi|22654285|sp|P46244|SYT_BUCAP RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|21623017|gb|AAM67686.1| threonyl-tRNA synthetase [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
          Length = 642

 Score =  550 bits (1417), Expect = e-154,   Method: Composition-based stats.
 Identities = 266/647 (41%), Positives = 410/647 (63%), Gaps = 19/647 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP    + F DGS + +    +  ++ E+   ++ +  +A+++N    + +  +  + SI
Sbjct: 1   MPV---IRFCDGSQQVYKHSVSLREIIENKKPNIIRSLIAISVNNSFSNFNTLITEDSSI 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
             I+ +D  +L +IR+SC  ++  A +  WP  ++    I + GFY D D E   + ++ 
Sbjct: 58  SFISKKDCEALNIIRYSCIQLLNYAAKKTWPSCKIGESEITKSGFYCDIDFENSITEEDF 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENV-TLYRQGE 178
             +E  M+ +I R+     Q +S + A E+F+ K E YK+ +++    K+N  +LY    
Sbjct: 118 FILENNMKTLIKREYFISHQNISFDHAYEMFKKKSEIYKIHLIKKYINKKNKISLYYHEN 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           +FD+  G  V +    K F KL K+ G YW+GD    ML RIYGTAW+T++EL ++L ++
Sbjct: 178 YFDIDMGMQVFNIKFCKYF-KLQKIGGIYWKGDHKNKMLQRIYGTAWSTKKELDKHLSYI 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
            E +KRDHRK+ + ++L+H+ ++  G+IFWH  GW IF  L  ++R K+K+  Y+E+ TP
Sbjct: 237 NELKKRDHRKIGKLLNLYHMQKESPGMIFWHNNGWIIFNELEIFVREKLKEYKYKEVKTP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ +WQ+SGHWD+Y+  +F       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 297 LLIDKSIWQKSGHWDNYQDAIFT------TSSENREYCIKPMNCPGHVQIFNCGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNE SGSLHGLMR+R FTQDDAH+FCT+EQ+  E      +I  +Y  
Sbjct: 351 LPIRMAEFGSCHRNESSGSLHGLMRIRNFTQDDAHIFCTQEQLRYEINNCIKMIYDLYST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           F F+KI+VK STRP+KR+G +++WD AE  +  VL       ++ +      GEGAFYGP
Sbjct: 411 FNFKKILVKFSTRPKKRIGDESVWDQAEKDLSDVLI------ENNLKFEHQEGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E++L+D++ R+WQCGTIQ+DF LP R  +FY++ H+ +  P++IHRA+ GSIERFIGI
Sbjct: 465 KIEFVLQDSLDRNWQCGTIQLDFYLPIRLRSFYIDEHNHQKIPIIIHRAILGSIERFIGI 524

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE F G LP WLSPIQ ++ +IT S + Y ++I       ++ +E+D RNE I +KIRE
Sbjct: 525 LIEEFSGKLPTWLSPIQVVILSITDSHINYVKKIVQHFSDINIRVESDLRNEKIGFKIRE 584

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H++++IP I+ICG+KE   + I +R         + +   I  L KE
Sbjct: 585 HTLRQIPYILICGEKEIKSKKISVRTRNGYNLGIIDIDCFIKKLQKE 631


>gi|322709352|gb|EFZ00928.1| threonyl-tRNA synthetase, putative [Metarhizium anisopliae ARSEF
           23]
          Length = 759

 Score =  550 bits (1417), Expect = e-154,   Method: Composition-based stats.
 Identities = 228/705 (32%), Positives = 362/705 (51%), Gaps = 74/705 (10%)

Query: 3   SDIKLTF---PDG--SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-E 56
           + I ++    PD    I       T   + + +++ +A +AV   +NG+V DL+ P+  +
Sbjct: 54  NSITVSLTAGPDNVTEISATAWETTPGQLLKHVAKVIASEAVVAKVNGEVWDLTRPLEAD 113

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ--PF 114
            ++  ++ +DP   AV  HS AH++ EA +  +    ++ GP    GF+YD    +    
Sbjct: 114 CAVSYLSSKDPEGRAVFWHSAAHVLGEACEHQF-GCMLSHGPPTNMGFFYDMAMREGDAV 172

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES-IPAKENVTL 173
              +   +E   ++      PF +  ++ E  R+LF   K  YK+  +E  +P   + T+
Sbjct: 173 KETDRPALEALAKKFFKEKQPFERVEIAKEDLRKLFGYSK--YKMHYIEKFVPDGGSTTV 230

Query: 174 YRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQ 233
           YR G   DLC GPH+++T Q+  F K+M  + AY+ GD     L RI G A+    ++ +
Sbjct: 231 YRNGSLVDLCTGPHIQNTKQISAF-KIMGNSSAYFLGDQANDSLQRISGVAFPKNDQMKE 289

Query: 234 YLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYE 292
           +L +LEE++KRDH+ + +   LF  +    G  F+   G +IF  + + +R +     Y+
Sbjct: 290 WLTYLEEAKKRDHQLIGKNQKLFWFSPLSPGSPFFLPHGTRIFNAIQTMLREQYWMRGYD 349

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT------------------------- 327
           E+++P + D  LW+ SGHWD Y+ +MF V                               
Sbjct: 350 EVHSPLMYDVQLWKTSGHWDHYQEDMFRVPLKHTHGAAPDAPVASGPDAAKDADKPAGKD 409

Query: 328 --------IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHG 379
                   ++  R FALKPMNCPGH  +F    +SYR LP R+A+F  ++RNE SG+L G
Sbjct: 410 GENAEVAKLEQERLFALKPMNCPGHALMFASEERSYRSLPWRVADFSVLHRNEASGALTG 469

Query: 380 LMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDA 439
           L RVR F QDDAH+FCT +Q+ +E   +   +  +Y  FGF    +KLSTRP+  +G  +
Sbjct: 470 LTRVRKFQQDDAHIFCTIDQVTDELRGLFKFMTHVYTMFGF-PFKLKLSTRPDSYMGKLS 528

Query: 440 LWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVD 499
            WD AE+ +K  L   K       +  +  G+GAFYGPK +  + DA+GR++QC TIQ+D
Sbjct: 529 DWDAAEDRLKKALQEFKGD-----DWVINPGDGAFYGPKIDVTVNDALGREFQCATIQLD 583

Query: 500 FNLPSRFNAFYVNSHSE-----------------KCHPVMIHRAVFGSIERFIGIMIENF 542
           F LP  FN  Y  + S                     PVMIHRAV GS +RF+GI+IE+F
Sbjct: 584 FQLPQNFNLLYRTNESTADRAKGEGEEEGGIPSGMARPVMIHRAVIGSFDRFMGIIIEHF 643

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WLSP Q +V  I   A +YA+E+ ++L    L  + D    T+  KIR   + +
Sbjct: 644 GGKWPFWLSPRQVMVIPIMKDAEDYAREVRDILHDAKLYADVDVSGNTLQKKIRAAQLAQ 703

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQK----VSLLDAIPILTK 643
              +++ G +E  +R++ IR     ++Q+    + L + +  L +
Sbjct: 704 YNFVMVVGAEEIEKRAVNIRNRDDPSSQQKGAMIDLDEVVKRLVE 748


>gi|172054921|ref|YP_001806248.1| threonyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
 gi|171701202|gb|ACB54182.1| threonyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
          Length = 644

 Score =  550 bits (1417), Expect = e-154,   Method: Composition-based stats.
 Identities = 265/622 (42%), Positives = 362/622 (58%), Gaps = 54/622 (8%)

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            ++  +P  L  IRH+CAH+MA AVQ ++PE +V IGP    GFYYDFD+ QPF+ ++L 
Sbjct: 29  PLSIANPEQLERIRHTCAHVMAMAVQILFPETKVTIGPTTNTGFYYDFDRPQPFAPEDLK 88

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE-- 178
           +I K+M+ II  + P +++ ++ E+ +   E   E YK+EIL+SIP  E +T Y  G   
Sbjct: 89  KITKQMRFIIKANLPIIREEITREEIKAEIEQLGEPYKLEILDSIPEGETITRYYIGSPD 148

Query: 179 -------------------------------WFDLCRGPHVRSTGQVKK-FFKLMKVAGA 206
                                          W+DLC GPH+  TG++    F L  VAGA
Sbjct: 149 GGRLPDVGEKLKTALPEPSLIKPVKIPATVSWWDLCAGPHINYTGEINPNAFALESVAGA 208

Query: 207 YWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGV 265
           YWRGD  +  L RIYGTAW T ++L  YL   EE+++RDHRKL +E+ LF I E+ G G+
Sbjct: 209 YWRGDETKAQLQRIYGTAWETPEQLDAYLQQQEEAKRRDHRKLGKELKLFSIQENAGGGL 268

Query: 266 IFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCA 324
           +FWH +G  +   +  Y R+  +   YE + TP V +  LW+ SGH+D YR NMF     
Sbjct: 269 VFWHPRGATMRYLIEDYWRKAHLDGGYELLYTPHVANLELWKTSGHFDFYRENMFDSMDI 328

Query: 325 DDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVR 384
                + + + +KPMNCP HV  + + L SYRE P+R AE G+VYR E SG LHGLMRVR
Sbjct: 329 -----EEQAYQIKPMNCPFHVLTYKNDLHSYREFPLRWAELGTVYRYERSGVLHGLMRVR 383

Query: 385 GFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
           GFTQDDAH+FC   Q+ +E L + NL   I  DFGF+   V LSTRPEK VG+D  W+ A
Sbjct: 384 GFTQDDAHIFCLPTQIASEILGVLNLTEKILSDFGFKDYEVNLSTRPEKSVGTDEGWELA 443

Query: 445 ENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPS 504
              +   L++               G GAFYGPK +  +KDAIGR WQC TIQVDFNLP 
Sbjct: 444 TQALVEALNS------KSWEYIEDKGGGAFYGPKIDIKIKDAIGRTWQCSTIQVDFNLPE 497

Query: 505 RFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA 564
           RF+  YV +   +  P+MIHRA+FGS+ERF GI+IEN+ G+ PLWL+PIQ  +  ++ + 
Sbjct: 498 RFDMEYVAADGSRQRPIMIHRAIFGSLERFYGILIENYAGDFPLWLAPIQLRLLPVSEAQ 557

Query: 565 VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRF 624
            EY + +   LK     +E D   E +  +IR   ++KIP++ I G+KE   +S+ IR  
Sbjct: 558 REYGEAVVATLKEAGYRVEIDCTGERLGKQIRNAELEKIPVVAIVGNKEVETQSLSIRTR 617

Query: 625 GSTTTQKV-------SLLDAIP 639
                  +       SL DAI 
Sbjct: 618 QQGDIGTMDLTELKKSLDDAIA 639


>gi|16331761|ref|NP_442489.1| threonyl-tRNA synthetase [Synechocystis sp. PCC 6803]
 gi|2501062|sp|Q55806|SYT_SYNY3 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|1001722|dbj|BAA10559.1| threonyl-tRNA synthetase [Synechocystis sp. PCC 6803]
          Length = 603

 Score =  550 bits (1417), Expect = e-154,   Method: Composition-based stats.
 Identities = 240/599 (40%), Positives = 360/599 (60%), Gaps = 16/599 (2%)

Query: 52  DPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE 111
             V   +I +    +   L  IRH+ +H+MA AVQ ++P+ QV IGP  E GFYYDFD  
Sbjct: 4   TVVSPDTIALPRTSESEQLKKIRHTTSHVMAMAVQKLFPKAQVTIGPWTETGFYYDFDVA 63

Query: 112 QPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENV 171
           +PF+  +L  I+K+M +II +  P +++ +S E+A++  ES +E YK+EIL+SI   E +
Sbjct: 64  EPFTEADLKAIKKEMVKIINKKLPVIREEISREEAKQRIESIQEPYKLEILDSIH--EPI 121

Query: 172 TLYRQGE-WFDLCRGPHVRSTGQVKK-FFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQ 229
           T+Y  G+ W+DLC GPH+ ST  +      L  VAGAYWRGD+N+  L RIYGTAW T +
Sbjct: 122 TVYHLGDQWWDLCAGPHLESTADINPKAIALESVAGAYWRGDANKAQLQRIYGTAWETPE 181

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMR-RKI 287
           +L +Y    EE+ KRDHRKL +E+ LF      G G+  W  KG  I   L  +++  +I
Sbjct: 182 QLAEYQRRKEEALKRDHRKLGKELGLFIFADPVGPGLPLWTPKGTIIRTILEDFLKQEQI 241

Query: 288 KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK-CADDTIKDLRTFALKPMNCPGHVA 346
           K  Y  + TP +    L++QSGHW  Y+ +MF +   + +       F LKPMNCP H+ 
Sbjct: 242 KRGYLPVVTPHIARVDLFKQSGHWQKYQEDMFPMMAESPEEAAQEMGFVLKPMNCPFHIQ 301

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           ++   L+SYR+LP+RLAEFG+VYR E SG L GL RVRGFT DD+H+F T +Q+  E L 
Sbjct: 302 IYKSELRSYRDLPLRLAEFGTVYRYEQSGELGGLTRVRGFTVDDSHLFVTPDQLDEEFLS 361

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEK---RVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
           + +LI++++K    +    +LS R  +    +GSD  W+ A+  ++  +  ++      +
Sbjct: 362 VVDLILTVFKSLQLKNFKARLSFRDPESDKYIGSDEAWEKAQGAIRRAVQELE------M 415

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
           +     GE AFYGPK ++I +DA+ R+WQ GT+QVD+NLP RF+  Y+ +   +  PVMI
Sbjct: 416 DYFEAPGEAAFYGPKLDFIFQDALEREWQLGTVQVDYNLPERFDLEYIAADGSRQRPVMI 475

Query: 524 HRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIE 583
           HRA FGS+ER IGI+IE + G+ PLWL+PIQ  +  ++   + +AQ I   ++S  L  E
Sbjct: 476 HRAPFGSLERLIGILIEEYAGDFPLWLAPIQVRLLAVSDEFLPFAQSIVQQMQSLGLRAE 535

Query: 584 TDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            D   + +   IR    +KIP++ + G KE    ++ IR   S    ++ + + +  L 
Sbjct: 536 VDTSGDRLGKMIRNAEKQKIPVMAVIGAKEVEANALNIRTRASGELGEIPVTEVLEKLQ 594


>gi|329945633|ref|ZP_08293366.1| threonine--tRNA ligase [Actinomyces sp. oral taxon 170 str. F0386]
 gi|328528636|gb|EGF55601.1| threonine--tRNA ligase [Actinomyces sp. oral taxon 170 str. F0386]
          Length = 683

 Score =  550 bits (1417), Expect = e-154,   Method: Composition-based stats.
 Identities = 238/677 (35%), Positives = 352/677 (51%), Gaps = 47/677 (6%)

Query: 1   MPSD--IKLTFPDGSIKNFPVHATGSDVAESISRSLAKK-AVAVAINGKVCDLSDPVREG 57
           M     I +T  DG  +      TG+ + +    S+ K   VA+ +NG+  DL   V  G
Sbjct: 1   MSDQPTINITL-DGVPRTIETGTTGTLLLQD---SVKKGGVVAMRVNGEPWDLDRQVPAG 56

Query: 58  SI-EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSS 116
           ++ E IT      L ++RHS  H+MA+AVQ ++P+V + IGP I DGFYYDF      + 
Sbjct: 57  AVVEPITLASEDGLNILRHSATHVMAQAVQEMFPQVNLGIGPFITDGFYYDFGAIDAVTP 116

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-------- 168
           + L +IEK+M+ I+     F+++ ++  +A+   E   + YK+E++ +  A         
Sbjct: 117 EMLREIEKRMKHIVKEGQRFVRRDIT--EAQGREELADQPYKLELITTKGAGAEGASVEV 174

Query: 169 --------ENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRI 220
                   +NV       W DLCRGPH+ ST  + + F L K + AYW+GD +   L RI
Sbjct: 175 GAGGLTMYDNVRRDGSVAWTDLCRGPHLPSTRLIGQGFALTKSSSAYWKGDQSGDSLQRI 234

Query: 221 YGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTL 279
           YGTAW ++ +L  Y   L E+ KRDHRKL  E+DL+   E+ G G++ +H KG  +   +
Sbjct: 235 YGTAWASKDDLKAYQTRLAEAAKRDHRKLGAELDLYSFPEEIGPGLVVFHPKGAMLRHQI 294

Query: 280 ISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT-------IKDL 331
             Y+  R     ++ ++TP++    L+  SGH   Y   MF    AD+         K  
Sbjct: 295 EQYVVDRHQDYGFDFVHTPEISKGGLFHTSGHLPYYADTMFPPMLADEERDGQGNITKAG 354

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
           + + LK MNCP H  +F    +SYRELP+R  E G  YR E SG +HGL R+RGFTQDD+
Sbjct: 355 QEYYLKAMNCPMHNLIFRSRGRSYRELPLRFFEMGHDYRYEKSGVVHGLTRMRGFTQDDS 414

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK------RVGSDALWDDAE 445
           H +CT EQ   E     +  +SI K FG     ++LSTR E        +GSDA W  A 
Sbjct: 415 HTYCTPEQAGEEIRAQIDFFLSILKAFGLTDFYLELSTRDEDGAKKDKFIGSDADWAAAT 474

Query: 446 NIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSR 505
             ++   D         +      G  AFYGPK    +KDAIGR WQ  TIQ DFN P R
Sbjct: 475 RALQDACDASG------LEVVPDPGGAAFYGPKVSVQVKDAIGRTWQMSTIQYDFNQPER 528

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAV 565
           F+  Y  +      P+MIH A  GS+ERFIG++ E++ G  P WLSP+Q  +  +  +  
Sbjct: 529 FDLEYTAADGTHQRPIMIHSAKLGSVERFIGVLTEHYAGAFPTWLSPVQVRLIPVAEAFD 588

Query: 566 EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
           +Y  ++A  L++  + +E D  ++    KIR  S  KIP  +I G ++A   ++  R   
Sbjct: 589 DYVDDVAAQLRAQGVRVEVDHSDDRFGKKIRNASKDKIPFTLIAGGEDAEAGAVSFRFRD 648

Query: 626 STTTQKVSLLDAIPILT 642
              T  V++ +A+  + 
Sbjct: 649 GEQTNGVAVKEAVAHIV 665


>gi|261328034|emb|CBH11011.1| threonyl-tRNA synthetase, putative [Trypanosoma brucei gambiense
           DAL972]
          Length = 799

 Score =  550 bits (1417), Expect = e-154,   Method: Composition-based stats.
 Identities = 223/754 (29%), Positives = 356/754 (47%), Gaps = 121/754 (16%)

Query: 1   MPSDIKLTFPDGSIKNFPVH-ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGS 58
           M S I +T  DG          T  D+A+ +S SLA++ VA  +N ++ DL+ P   + +
Sbjct: 47  MQSPISITLNDGKQLPATSWLTTPIDIAKKLSNSLAERVVAARVNEEIWDLTRPFEGDAT 106

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSD 117
           +E++  +D  +  V  HS +H++  A++ ++ + ++++GP +E+G F+Y+ +  +P +  
Sbjct: 107 LELLDWDDADARHVFWHSSSHVLGYALERVF-QTRLSVGPALEEGGFFYEGETNRPVTEA 165

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +   IE  MQE++    PF +  +  E A  LF+  +   K+ +   +P     T+YR G
Sbjct: 166 DYTTIETAMQELVKMKVPFQRLTVKKEDALRLFQYTEFKSKI-LASKVPENGTCTVYRCG 224

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
              D CRGPH+  TG+VK F    K + +Y+ G +   +L R+YG ++  Q  LT++   
Sbjct: 225 NLIDPCRGPHLPDTGRVKSFSLT-KNSSSYFEGKAENAVLQRVYGISFPKQTMLTEWKKL 283

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
            EE+ +RDHR + R   LFH  E   G  FW   G +I+ TLI + R++ +   +EE+ +
Sbjct: 284 QEEAARRDHRTIGRHQQLFHFHEASPGNAFWLPHGARIYNTLIEFQRKQYRRRGFEEVVS 343

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +    LW  SGHWD Y  NMF +        +     +KPMNCPGH  +F     SYR
Sbjct: 344 PNMFSSRLWMVSGHWDKYADNMFLINV------EKEDHGMKPMNCPGHCLMFAMQPHSYR 397

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ELP+R A+FG ++RNE SG+L GL RVR F QDDAH+FC  +Q+ +E       +  +Y 
Sbjct: 398 ELPIRYADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCRMDQVKDEIHSALIFLKDVYD 457

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDT---------------------- 454
             GF+  + K STRPE ++GSD +WD+AE+ ++  L++                      
Sbjct: 458 VLGFKFFL-KHSTRPENKLGSDEMWDEAESYLQAALNSFCGIPDELPDPFNKGSTFVYDG 516

Query: 455 -----------IKNSSQDRINT-----------------GVLLGEGAFYGPKFEYILKDA 486
                      +K     + +                      G+GAFYGPK + +++DA
Sbjct: 517 RKESVKKLRAMLKKRGDKKNDENSPADDVWPGPTHEDAWEENTGDGAFYGPKIDIVVEDA 576

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFY------VNSHSEKCHPVMIH---------------- 524
           + R  QC TIQ+DFNLP RF   Y                   H                
Sbjct: 577 LRRRHQCATIQLDFNLPKRFGLKYTLPSNAAGDDGPAPKATECHKDPNAELKADKPEGKV 636

Query: 525 -----------------------------------RAVFGSIERFIGIMIENFKGNLPLW 549
                                              RA+FGS+ER I I+ E++ G+ P W
Sbjct: 637 ETAAGAPKSSYEKAAHELNIDQRLDANQARPVMIHRAIFGSLERCIAILCEHYGGDWPFW 696

Query: 550 LSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIIC 609
           LSP Q IV  ++     YAQ + +   +     + D    T+  KIR   + +   I++ 
Sbjct: 697 LSPRQVIVVPVSLENAAYAQTVRDTFFAAGFFADVDNGTATLEKKIRNAELARYNFILVV 756

Query: 610 GDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           G  E   +S+ +R   +      +L +A+  L +
Sbjct: 757 GQAEQEGQSVNVRTRDNRRHGTKTLDEALQWLRE 790


>gi|171742906|ref|ZP_02918713.1| hypothetical protein BIFDEN_02023 [Bifidobacterium dentium ATCC
           27678]
 gi|171278520|gb|EDT46181.1| hypothetical protein BIFDEN_02023 [Bifidobacterium dentium ATCC
           27678]
          Length = 708

 Score =  550 bits (1417), Expect = e-154,   Method: Composition-based stats.
 Identities = 243/666 (36%), Positives = 363/666 (54%), Gaps = 44/666 (6%)

Query: 1   MPSD-IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI 59
           M    I +T  +G  K      TG  +         K  +AV +NG+  DL   + +G +
Sbjct: 32  MAEQTISITL-NGESKEVAADQTGVQLFAD-----DKNIIAVRLNGEPRDLYTELHDGDV 85

Query: 60  -EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
            E I  +    +A++RHS  H+MA+AVQ I P+ ++ +GP+I+DGFYYDFD  +PF+ ++
Sbjct: 86  VEPIALDSEDGVAIMRHSATHVMAQAVQEIRPDAKLGVGPVIKDGFYYDFDVVEPFTPED 145

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPA----------- 167
           L  IEK+MQ II     F ++ +S ++A    E   + YK+E+++   A           
Sbjct: 146 LKDIEKRMQRIIKSSQSFRRRVVSEQEALA--EEADQPYKLELIKDKEAHLDPEAATEIS 203

Query: 168 KENVTLYRQGE------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIY 221
           ++ ++ Y   +      W DLCRGPH+ +T  +K F K+ + A AYWRG+   PML RIY
Sbjct: 204 EKELSFYDNIDRDGNVVWKDLCRGPHLPNTRYIKAF-KIERSAAAYWRGNEANPMLQRIY 262

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLI 280
           G A+ T+++L  Y   LEE+ KRDHRKL  EMDLF   ++ G G+  +H KG  +   + 
Sbjct: 263 GAAFATKEDLKAYQTRLEEAAKRDHRKLGAEMDLFSFPDEIGPGLAVFHPKGAAVINAME 322

Query: 281 SYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT-------IKDLR 332
            Y R    K  Y  + TP +    L++ SGH   Y+  M+     D+        IK   
Sbjct: 323 DYSREMHRKHHYSFVQTPHITKGGLYETSGHLHWYKDGMYPAMRLDEEKDENGNIIKQGF 382

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
            + LKPMNCP H  +F    +SYRELP+RL EFG+VYR E SG +HGL RVRG TQDD+H
Sbjct: 383 DYYLKPMNCPMHNLIFKSRQRSYRELPLRLFEFGTVYRYEKSGEVHGLTRVRGLTQDDSH 442

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGV 451
           ++CT+EQM +E   +   ++ + KDFG +   ++LST+     VGSD +W++A N +  V
Sbjct: 443 IYCTREQMKDELKNLLTFVLGLLKDFGLDDFYLELSTKDPHKYVGSDEIWEEATNTLAEV 502

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
                   +  +         AFYGPK     +DAIGR WQ  TIQ+DFNLP RF   Y+
Sbjct: 503 AK------ESGLELVDDPCGAAFYGPKISVQARDAIGRTWQVSTIQLDFNLPERFKLEYI 556

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
            +      PVMIHRA+FGSIERF  +++E++ G  P WL+P+Q +   +      + Q  
Sbjct: 557 AADGTHQRPVMIHRALFGSIERFFAVLLEHYAGAFPAWLAPVQVLGVPVADEFAPHLQRF 616

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
              L+   +  E D  ++    KIR  S  K+P I+I G+++ +  ++  R    +    
Sbjct: 617 IASLEEETVRCEIDMSDDRFGKKIRNASKSKVPFILIVGEEDMNNNAVSFRFRDGSQLNG 676

Query: 632 VSLLDA 637
           V + +A
Sbjct: 677 VPVDEA 682


>gi|222823074|ref|YP_002574647.1| threonyl-tRNA synthetase [Campylobacter lari RM2100]
 gi|254783514|sp|B9KEB1|SYT_CAMLR RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|222538295|gb|ACM63396.1| threonyl-tRNA synthetase [Campylobacter lari RM2100]
          Length = 603

 Score =  550 bits (1416), Expect = e-154,   Method: Composition-based stats.
 Identities = 256/614 (41%), Positives = 380/614 (61%), Gaps = 21/614 (3%)

Query: 36  KKAVAVAINGKVCDLSDPVREGSIEIITPE-DPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           K  +A A N  + D      + ++  I  +    SL VIRHSCAH+MA+A++S++PE + 
Sbjct: 3   KDIIAYANNETLVDTQSFNNDTNLTPIYFDNSKESLEVIRHSCAHLMAQAIKSLYPEAKF 62

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            +GP+IEDGFYYDF  +   S ++L++IEKKM+E+        K  LS  + +E  +   
Sbjct: 63  FVGPVIEDGFYYDFRVDSKISEEDLSKIEKKMKELAEAKLDITKYELSKAEVKE--KFAN 120

Query: 155 EAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNR 214
           +  K E+L  IP    V++Y+QGE+ DLCRGPHV +T +  +FFKL +VAGAY  GD  R
Sbjct: 121 DDLKQEVLLRIP-DGKVSIYKQGEFEDLCRGPHVPNT-KYLRFFKLTRVAGAYLGGDEKR 178

Query: 215 PMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGW 273
            ML+RIYGTA+  ++ L +YL  +EE++KRDHRKL  EM LF   ++ G G+  W   G 
Sbjct: 179 EMLTRIYGTAFADKESLNEYLKIIEEAKKRDHRKLGNEMKLFAFDDEIGGGLPIWLSNGA 238

Query: 274 KIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           K+   L   + +      YE +  P++L    W+ SGH+ +Y+ NM+  +       D +
Sbjct: 239 KLRSKLEHLLYKAHRLRGYEPVRGPELLKADAWKISGHYANYKENMYFTQI------DEQ 292

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
            + +KPMNC GH+ ++   ++SYR+LP++  E+G V+R+E SG LHGL RVR FTQDDAH
Sbjct: 293 EYGIKPMNCVGHIKIYQSDVRSYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFTQDDAH 352

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
           +FC   Q+  + L+I + + ++ K FGF+  M ++STRP K +G D +WD A N +K  L
Sbjct: 353 IFCMPSQIKEQVLEILSFVDTLMKAFGFDYEM-EISTRPAKAIGDDEIWDIATNALKQAL 411

Query: 453 DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
           D      +  +  G+  G GAFYGPK +  + DA+ R WQCGTIQVDFNLPSRF   Y +
Sbjct: 412 D------EQGLKYGIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDFNLPSRFKLEYTD 465

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIA 572
           + +EK  PVM+HRA+ GS ERFIGI+IE+  G LP +++P Q  +  I+ +  EYA+EIA
Sbjct: 466 ADNEKKQPVMLHRAILGSFERFIGILIEHCAGELPFFIAPTQVAIVPISQNHHEYAKEIA 525

Query: 573 NLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
             L    +  E   +NE++N KIR      +P+I++ GD+E + +S+ +R   +   + +
Sbjct: 526 KKLLELGIDSEVYSKNESLNKKIRTAEKAHVPMILVLGDEEVANKSVALRDRRAKEQKTL 585

Query: 633 SLLDAIPILTKESL 646
           +L + I  LTKE L
Sbjct: 586 TLDEFI-TLTKEKL 598


>gi|72388976|ref|XP_844783.1| threonyl-tRNA synthetase [Trypanosoma brucei TREU927]
 gi|62176044|gb|AAX70165.1| threonyl-tRNA synthetase, putative [Trypanosoma brucei]
 gi|70801317|gb|AAZ11224.1| threonyl-tRNA synthetase, putative [Trypanosoma brucei brucei
           strain 927/4 GUTat10.1]
          Length = 799

 Score =  550 bits (1416), Expect = e-154,   Method: Composition-based stats.
 Identities = 223/754 (29%), Positives = 356/754 (47%), Gaps = 121/754 (16%)

Query: 1   MPSDIKLTFPDGSIKNFPVH-ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGS 58
           M S I +T  DG          T  D+A+ +S SLA++ VA  +N ++ DL+ P   + +
Sbjct: 47  MQSPISITLNDGKQLPATSWLTTPIDIAKKLSNSLAERVVAARVNEEIWDLTRPFEGDAT 106

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSD 117
           +E++  +D  +  V  HS +H++  A++ ++ + ++++GP +E+G F+Y+ +  +P +  
Sbjct: 107 LELLDWDDADARHVFWHSSSHVLGYALERVF-QTRLSVGPALEEGGFFYEGETNRPVTEA 165

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +   IE  MQE++    PF +  +  E A  LF+  +   K+ +   +P     T+YR G
Sbjct: 166 DYTTIETAMQELVKMKVPFQRLTVKKEDALRLFQYTEFKSKI-LASKVPENGTCTVYRCG 224

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
              D CRGPH+  TG+VK F    K + +Y+ G +   +L R+YG ++  Q  LT++   
Sbjct: 225 NLIDPCRGPHLPDTGRVKSFSLT-KNSSSYFEGKAENAVLQRVYGISFPKQTMLTEWKKL 283

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
            EE+ +RDHR + R   LFH  E   G  FW   G +I+ TLI + R++ +   +EE+ +
Sbjct: 284 QEEAARRDHRTIGRHQQLFHFHEASPGNAFWLPHGARIYNTLIEFQRKQYRRRGFEEVVS 343

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +    LW  SGHWD Y  NMF +        +     +KPMNCPGH  +F     SYR
Sbjct: 344 PNMFSSRLWMVSGHWDKYADNMFLINV------EKEDHGMKPMNCPGHCLMFAMQPHSYR 397

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ELP+R A+FG ++RNE SG+L GL RVR F QDDAH+FC  +Q+ +E       +  +Y 
Sbjct: 398 ELPIRYADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCRMDQVKDEIHSALIFLKDVYD 457

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDT---------------------- 454
             GF+  + K STRPE ++GSD +WD+AE+ ++  L++                      
Sbjct: 458 VLGFKFFL-KHSTRPENKLGSDEMWDEAESYLQAALNSFCGIPDELPDPFNKGSTFVYDG 516

Query: 455 -----------IKNSSQDRINT-----------------GVLLGEGAFYGPKFEYILKDA 486
                      +K     + +                      G+GAFYGPK + +++DA
Sbjct: 517 RKESVKKLRAMLKKRGDKKNDENSPADDVWPGPTHEDAWEENTGDGAFYGPKIDIVVEDA 576

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFY------VNSHSEKCHPVMIH---------------- 524
           + R  QC TIQ+DFNLP RF   Y                   H                
Sbjct: 577 LRRRHQCATIQLDFNLPKRFGLKYTLPSNAAGDDGPAPKATECHKDPNAELKADKPEGKV 636

Query: 525 -----------------------------------RAVFGSIERFIGIMIENFKGNLPLW 549
                                              RA+FGS+ER I I+ E++ G+ P W
Sbjct: 637 EAAAGAPKSSYEKAAHELNIDQRLDANQARPVMIHRAIFGSLERCIAILCEHYGGDWPFW 696

Query: 550 LSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIIC 609
           LSP Q IV  ++     YAQ + +   +     + D    T+  KIR   + +   I++ 
Sbjct: 697 LSPRQVIVVPVSLENAAYAQTVRDTFFAAGFFADVDNGTATLEKKIRNAELARYNFILVV 756

Query: 610 GDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           G  E   +S+ +R   +      +L +A+  L +
Sbjct: 757 GQAEQEGQSVNVRTRDNRRHGTKTLDEALQWLRE 790


>gi|242791014|ref|XP_002481676.1| threonyl-tRNA synthetase, putative [Talaromyces stipitatus ATCC
           10500]
 gi|218718264|gb|EED17684.1| threonyl-tRNA synthetase, putative [Talaromyces stipitatus ATCC
           10500]
          Length = 724

 Score =  550 bits (1416), Expect = e-154,   Method: Composition-based stats.
 Identities = 229/681 (33%), Positives = 364/681 (53%), Gaps = 54/681 (7%)

Query: 3   SDIKLTFP--DG---SIKNFPVHATGSDVAESISRSLAKKAVAVAING-KVCDLSDPVR- 55
           SDI +T    DG   ++      +T     + + + ++   V   I+  ++ DL+ P+  
Sbjct: 54  SDITITLDIGDGNPSTVIGKSWESTPGSFLKDVPKEISANIVIAKIDDKELWDLNRPLER 113

Query: 56  EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE--QP 113
           +  +  +  + P    V  HS AH + EA +  +    ++ GP    GF+YD      + 
Sbjct: 114 DCKLSYLPFDHPEGRDVFWHSSAHCLGEACELEF-GCLLSHGPPTPQGFFYDMAMPNGRA 172

Query: 114 FSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTL 173
               + A ++KK  +I      F +  +S E  +++F   K  YK+  + ++   E  T+
Sbjct: 173 VLPSDWAPLDKKANQIFKERQSFDRLEVSKENLKKMFAYSK--YKLHYINNLVEGEKSTV 230

Query: 174 YRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQ 233
           YR G   DLCRGPH+++T ++K F K+M+ + AY+ GD +   L RI G A+  +  + +
Sbjct: 231 YRCGTLVDLCRGPHIQNTNKIKAF-KIMQNSSAYFLGDQSNDSLQRIRGVAFPDKNGMKE 289

Query: 234 YLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYE 292
           +L FLEE+EKR+H+K+ +E +LF   +   G  F    G KIF  L   +R + +   Y+
Sbjct: 290 HLKFLEEAEKRNHQKIGKEQELFFFDDVSPGCPFLLPHGTKIFNALQKLLRAEYRKRGYQ 349

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+ TP + D  +W+ SGHW  Y  +MF +        + R +ALKPMNCPGH  +F H  
Sbjct: 350 EVQTPNMYDVGIWKTSGHWAHYSDDMFKLDV------EKREWALKPMNCPGHFMLFGHRE 403

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
           +SYRELP+R+A+FG ++RNE SG+LHGL RVR F QDD+H+FCT EQ+ +E   I + + 
Sbjct: 404 RSYRELPLRIADFGVLHRNEASGALHGLTRVRKFQQDDSHIFCTSEQITSEIEGIFDFLK 463

Query: 413 SIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
           S+Y  FGF   + KLSTRPEK +G    W+ AE  ++  L+  K       +  +  G+G
Sbjct: 464 SVYGLFGFTFKL-KLSTRPEKYMGELEAWNYAEEQLRQALNNFKGD-----DWEINEGDG 517

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE---------------- 516
           AFYGPK +  + DA+ RD+QC TIQ+D+  P  F   Y+ +  +                
Sbjct: 518 AFYGPKIDITISDALKRDFQCATIQLDYQAPINFKLEYITNEKQAGSDAKANKDDTEKAK 577

Query: 517 -----KCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
                +  PV+IHRA+ GS ERF+GI+IE+F G  P WLSP Q ++  +  +  +YA+E+
Sbjct: 578 ESNANRARPVVIHRAIIGSFERFLGILIEHFAGKWPFWLSPRQILIVPVMPALNDYAKEL 637

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT-- 629
              L +   +++ D    T+  KIR   + +   I + G +E   RS+ IR     ++  
Sbjct: 638 QENLLADKFNVDVDVSGNTLQKKIRTGQLAQYNFIFVVGAQEKESRSVNIRNRDDPSSHA 697

Query: 630 --QKVSLLDA---IPILTKES 645
             + +SL +A   +  L KE 
Sbjct: 698 KGELISLEEARVKLKALRKER 718


>gi|115389848|ref|XP_001212429.1| threonyl-tRNA synthetase [Aspergillus terreus NIH2624]
 gi|114194825|gb|EAU36525.1| threonyl-tRNA synthetase [Aspergillus terreus NIH2624]
          Length = 713

 Score =  550 bits (1416), Expect = e-154,   Method: Composition-based stats.
 Identities = 223/668 (33%), Positives = 360/668 (53%), Gaps = 45/668 (6%)

Query: 4   DIKLTFP--DGSIKNFP---VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EG 57
           +I +T    +G+    P      T   + +++ + ++   V   ++G++ DL+ P+  E 
Sbjct: 50  EINVTLDLGNGNTSVVPAKAWETTPGQLLKNVPKEVSASVVIAKVDGELFDLNRPLEREC 109

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK--EQPFS 115
           ++  +  E P    V  HS AH + EA +  +    ++ GP    GF+YD      +   
Sbjct: 110 TVAYVPFEHPEGREVFWHSSAHCLGEACECQY-GCLLSHGPPTPQGFFYDMAMPDNRVVR 168

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
             + + ++ K   I      F +  +S E  +++F   K  YK+  ++ +   E  T+YR
Sbjct: 169 ESDWSSLDSKASRIFKEKQSFDRLEVSKENLKKMFAYSK--YKLHYIDKLVTGEKSTVYR 226

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
            G   DLCRGPH+++TG++K F K+M+ + AY+ GD     L RI G A+  ++++ ++L
Sbjct: 227 CGTLVDLCRGPHIQNTGKIKTF-KIMQNSSAYFLGDQTNDSLQRIRGVAFPDKKQMQEHL 285

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEI 294
            FLEE+EKR+H ++ ++ +LF   +   G  F    G KIF  L + +R + +   Y+E+
Sbjct: 286 KFLEEAEKRNHLRIGKDQELFFFDDVSPGCAFLLPNGTKIFNALQTLLRSEYRKRGYQEV 345

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
            TP + D  +W+ SGHW  Y+ +MF +        + R +ALKPMNCPGH  +F H  +S
Sbjct: 346 QTPNMYDVGIWKTSGHWAHYKDDMFKLDV------EKREWALKPMNCPGHFVLFGHRERS 399

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YRELP+R+A+FG ++RNE SG+L GL RVR F QDD H+FCT++Q+ +E   + + + SI
Sbjct: 400 YRELPLRIADFGVLHRNEASGALSGLTRVRKFQQDDTHIFCTQDQIMSEIEGLFDFLQSI 459

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           Y  FGF   + KLSTRPEK +G    W+ AE  +K  +   K       +  +  G+GAF
Sbjct: 460 YGLFGFTFKL-KLSTRPEKYLGELETWNYAEEQLKAAMTKFKGD-----DWTIDEGDGAF 513

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN------SHSE----------KC 518
           YGPK +  + DA+ R++QC TIQ+D+  P  F   Y+          E          + 
Sbjct: 514 YGPKIDITIADALKREFQCATIQLDYQAPLNFKLEYMTHERADVKDGETAKPGEPGPGRA 573

Query: 519 HPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSH 578
            PV+IHRA+ GS ERF+GI+IE+F G  P W+SP Q ++  +  +  +Y +E+  +L+  
Sbjct: 574 RPVVIHRAIIGSFERFLGILIEHFGGKWPFWISPRQILIVPVMPAVNDYVEELQTILRGD 633

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK----VSL 634
            L+++ D    T+  KIR   + +   I + G  E   RS+ IR      TQK    + L
Sbjct: 634 KLNVDIDISGNTMQKKIRNGQLAQYNFIFVVGASEKESRSVNIRNRDDPATQKQGVMIPL 693

Query: 635 LDAIPILT 642
            +A   L 
Sbjct: 694 EEAREKLR 701


>gi|306822719|ref|ZP_07456097.1| threonine--tRNA ligase [Bifidobacterium dentium ATCC 27679]
 gi|304554264|gb|EFM42173.1| threonine--tRNA ligase [Bifidobacterium dentium ATCC 27679]
          Length = 708

 Score =  550 bits (1416), Expect = e-154,   Method: Composition-based stats.
 Identities = 243/666 (36%), Positives = 363/666 (54%), Gaps = 44/666 (6%)

Query: 1   MPSD-IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI 59
           M    I +T  +G  K      TG  +         K  +AV +NG+  DL   + +G +
Sbjct: 32  MAEQTISITL-NGESKEVAADQTGVQLFAD-----DKNIIAVRLNGEPRDLYTELHDGDV 85

Query: 60  -EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
            E I  +    +A++RHS  H+MA+AVQ I P+ ++ +GP+I+DGFYYDFD  +PF+ ++
Sbjct: 86  VEPIALDSEDGVAIMRHSATHVMAQAVQEIRPDAKLGVGPVIKDGFYYDFDVVEPFTPED 145

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPA----------- 167
           L  IEK+MQ II     F ++ +S ++A    E   + YK+E+++   A           
Sbjct: 146 LKDIEKRMQRIIKSSQSFRRRVVSEQEALA--EEADQPYKLELIKDKEAHLDPEAATEIS 203

Query: 168 KENVTLYRQGE------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIY 221
           ++ ++ Y   +      W DLCRGPH+ +T  +K F K+ + A AYWRG+   PML RIY
Sbjct: 204 EKELSFYDNVDRDGNVVWKDLCRGPHLPNTRYIKAF-KIERSAAAYWRGNEANPMLQRIY 262

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLI 280
           G A+ T+++L  Y   LEE+ KRDHRKL  EMDLF   ++ G G+  +H KG  +   + 
Sbjct: 263 GAAFATKEDLKAYQTRLEEAAKRDHRKLGAEMDLFSFPDEIGPGLAVFHPKGAAVINAME 322

Query: 281 SYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT-------IKDLR 332
            Y R    K  Y  + TP +    L++ SGH   Y+  M+     D+        IK   
Sbjct: 323 DYSREMHRKHHYSFVQTPHITKGGLYETSGHLHWYKDGMYPAMRLDEEKDENGNIIKQGF 382

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
            + LKPMNCP H  +F    +SYRELP+RL EFG+VYR E SG +HGL RVRG TQDD+H
Sbjct: 383 DYYLKPMNCPMHNLIFKSRQRSYRELPLRLFEFGTVYRYEKSGEVHGLTRVRGLTQDDSH 442

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGV 451
           ++CT+EQM +E   +   ++ + KDFG +   ++LST+     VGSD +W++A N +  V
Sbjct: 443 IYCTREQMKDELKNLLTFVLGLLKDFGLDDFYLELSTKDPHKYVGSDEIWEEATNTLAEV 502

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
                   +  +         AFYGPK     +DAIGR WQ  TIQ+DFNLP RF   Y+
Sbjct: 503 AK------ESGLELVDDPCGAAFYGPKISVQARDAIGRTWQVSTIQLDFNLPERFKLEYI 556

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
            +      PVMIHRA+FGSIERF  +++E++ G  P WL+P+Q +   +      + Q  
Sbjct: 557 AADGTHQRPVMIHRALFGSIERFFAVLLEHYAGAFPAWLAPVQVLGVPVADEFAPHLQRF 616

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
              L+   +  E D  ++    KIR  S  K+P I+I G+++ +  ++  R    +    
Sbjct: 617 IASLEEETVRCEIDMSDDRFGKKIRNASKSKVPFILIVGEEDMNNNAVSFRFRDGSQLNG 676

Query: 632 VSLLDA 637
           V + +A
Sbjct: 677 VPVDEA 682


>gi|322502963|emb|CBZ38047.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 788

 Score =  550 bits (1416), Expect = e-154,   Method: Composition-based stats.
 Identities = 226/746 (30%), Positives = 362/746 (48%), Gaps = 113/746 (15%)

Query: 1   MPSDIKLTFPDGSIKNFPVHAT-GSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGS 58
           M + IK++ PDG + +     T   D+A+ +S SL  K +   +N  + DL+ P   +  
Sbjct: 44  MKAPIKVSLPDGKVMDAESWVTCPLDIAKRLSNSLPDKVIVARVNEALWDLTRPFEADCQ 103

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSD 117
           +E++  +D  +  V  HS +H++  A++ I+ + ++++GP +E+G F+Y+    +P S  
Sbjct: 104 LELLDWDDKDAREVFWHSSSHVLGYALERIF-DTKLSVGPALEEGGFFYEGLTNRPVSES 162

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +   IE  MQE++ +  P+ +  +S E A  LF   +   K+ +   +P   + T+YR G
Sbjct: 163 DYKAIESAMQELVKQKMPYQRLEVSKEDALRLFGYTEFKSKI-LASKVPDGGSCTVYRCG 221

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
              D CRGPH+  TG+VK F  + K + +Y+ G +   +L R+YG ++     LT++   
Sbjct: 222 MLIDPCRGPHLPDTGRVKAF-AVTKNSSSYFEGKAENEVLQRVYGISFPKNPMLTEWKTI 280

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
            EE+ KRDHR + R+ +LF+  E   G  FW   G +I+ TL+ ++R+K +   ++E+ +
Sbjct: 281 QEEAAKRDHRVIGRQQNLFNFHEVSPGSAFWLPHGTRIYNTLVEFLRKKYRRCGFQEVIS 340

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +    LW  SGHW+ Y  NMF  KC      +   F LKPMNCPGH  +F     SY+
Sbjct: 341 PNMYSSKLWMVSGHWEKYADNMFCTKC------EKEDFGLKPMNCPGHCIMFASQPHSYK 394

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ELP+R A+FG ++RNE SG+L GL RVR F QDDAH+FC  +Q+ +E       +  +Y 
Sbjct: 395 ELPIRYADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCRMDQITDEMEGQMQFLSDVYG 454

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTI--------------------- 455
             GF K     STRP  ++GSDALWD +E+ ++  L+                       
Sbjct: 455 VLGF-KFYFYHSTRPANKLGSDALWDQSESYLRTALNRFCGIPEELPDPLHPDQRFHYDG 513

Query: 456 ------------------------KNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDW 491
                                   K  +          G+GAFYGPK + +++DA+ R  
Sbjct: 514 KPDSVKKMKALMKKAERCEDPNAWKGPTNGGDGWIENAGDGAFYGPKIDIVVEDALRRRH 573

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM-----------------------IHRAVF 528
           QC TIQ+DFNLPSRF   Y    +EK    +                       + +   
Sbjct: 574 QCATIQLDFNLPSRFGLKYTLPAAEKDETTVSPTEKQKHADPALTASSPAVEDCVSKPKP 633

Query: 529 G-------------------------------SIERFIGIMIENFKGNLPLWLSPIQAIV 557
           G                               S+ER I I+ E+F G+ P WLSP Q +V
Sbjct: 634 GTYEAAVRDLGIDLELDANQARPVMIHRAILGSLERSIAILCEHFGGDWPFWLSPRQVMV 693

Query: 558 TTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASER 617
             +++S  EY+Q++ + +       + D    T++ KIR     +   I++ G KE    
Sbjct: 694 VPVSASNYEYSQQVRDTMHDAGFHADVDNGAATLDKKIRNAEKARYNFILVVGQKEQDAT 753

Query: 618 SIGIRRFGSTTTQKVSLLDAIPILTK 643
           ++ IR  G       SL++A+  L +
Sbjct: 754 AVNIRARGEKRLGNKSLVEAVQWLKE 779


>gi|256832610|ref|YP_003161337.1| threonyl-tRNA synthetase [Jonesia denitrificans DSM 20603]
 gi|256686141|gb|ACV09034.1| threonyl-tRNA synthetase [Jonesia denitrificans DSM 20603]
          Length = 673

 Score =  550 bits (1416), Expect = e-154,   Method: Composition-based stats.
 Identities = 244/668 (36%), Positives = 367/668 (54%), Gaps = 44/668 (6%)

Query: 6   KLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI-EIITP 64
            +T  DG         TG+D+      S  K  V + +NG++ DL   V  G + + +  
Sbjct: 12  TITL-DGETTQVTDGTTGTDLF-----SANKNIVVLRVNGELKDLFYRVAAGDVVDGVDI 65

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
            +P  L V+RHS AH++A+AVQ + P+ ++ IGP I DGFYYDFD E PF+ ++L ++EK
Sbjct: 66  NEPDGLNVLRHSAAHVLAQAVQKVNPDAKLGIGPPIVDGFYYDFDVETPFAPEDLKKLEK 125

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE-------------------SI 165
           +M  I+     F ++ ++ E+     E   E YK+E++                     +
Sbjct: 126 EMMRIVKEGQTFQRRVITEEQ--GHTELAGEPYKIELISLKSQSDTAAEGASVEVGAGEL 183

Query: 166 PAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAW 225
              +NV    +  W DLCRGPH+ ST  +   FKLM+ A AYWRG    P L RIYGTAW
Sbjct: 184 TIYDNVRRNGEVAWGDLCRGPHLPSTKLIGNGFKLMRSAAAYWRGSEKNPQLQRIYGTAW 243

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDG-SGVIFWHRKGWKIFQTLISYMR 284
            T+ +LT++L  L E+E+RDHR+L  EMDLF   ++  SG+  +H +G  +   +  Y R
Sbjct: 244 PTKDQLTEHLTRLAEAERRDHRRLGVEMDLFSFPDEMGSGLAVFHPRGGVVRLEMEEYSR 303

Query: 285 R-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTI-------KDLRTFAL 336
           R  I+  Y  +N+P +    L++ SGH D YR  M+     D+         K  + + L
Sbjct: 304 RRHIEAGYSFVNSPHITKGRLYEVSGHLDWYREGMYPAMHMDEERDADGTLRKQGQDYYL 363

Query: 337 KPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT 396
           KPMNCP H  +F+   +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDDAH++CT
Sbjct: 364 KPMNCPMHNLIFDARGRSYRELPLRLFEFGTVYRYEKSGVIHGLTRARGFTQDDAHIYCT 423

Query: 397 KEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR-VGSDALWDDAENIMKGVLDTI 455
           KEQM +E       ++ + KD+G +   ++LSTR  ++ VG+D +WD+A   ++ V    
Sbjct: 424 KEQMKDELTNALTFVLDLLKDYGLDDFYLELSTRDPEKSVGTDEIWDEATRTLEEVAQDS 483

Query: 456 KNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS 515
                  +      G  AFYGPK     KDAIGR WQ  TIQ+DFNLP +F+  Y  +  
Sbjct: 484 G------LELVPDPGGAAFYGPKISVQAKDAIGRTWQMSTIQLDFNLPEKFDLEYQAADG 537

Query: 516 EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLL 575
            +  PVMIHRA+FGSIERF  +++E++ G  P+WL+P+Q +   +  +  +Y  +    L
Sbjct: 538 TRQRPVMIHRALFGSIERFFAVLLEHYAGQFPVWLAPVQVLAVPVADAFNDYLGDFVAEL 597

Query: 576 KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
           ++  +  E D  ++    K+R  S  K+P  +I G ++    ++  R    +    +   
Sbjct: 598 RTRGVRAELDDSSDRFPKKVRNASTSKVPFTVIAGGEDEQAGAVSFRYRDGSQENGIPRE 657

Query: 636 DAIPILTK 643
            AI  + +
Sbjct: 658 QAITRILE 665


>gi|300711550|ref|YP_003737364.1| threonyl-tRNA synthetase [Halalkalicoccus jeotgali B3]
 gi|299125233|gb|ADJ15572.1| threonyl-tRNA synthetase [Halalkalicoccus jeotgali B3]
          Length = 640

 Score =  549 bits (1415), Expect = e-154,   Method: Composition-based stats.
 Identities = 241/644 (37%), Positives = 364/644 (56%), Gaps = 20/644 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            + +T PDGS       +T  DVA  I   L +  VA  ++G+      P+  +  IEI+
Sbjct: 2   SVTVTLPDGSELAVEAGSTVEDVAYEIGPGLGRDTVAGVVDGEFVAKEHPIEKDVEIEIV 61

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T      L  +RHS AH+ A+A+Q +  E  + IGP  +DGFYYD    +     +L +I
Sbjct: 62  TESSDEYLDALRHSAAHVFAQALQRLHSEATLTIGPWTDDGFYYDVTGVE-LDEADLEEI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWFD 181
             + +EII  D P  +  +S E+A E +E     +K EILE   A E+ V+ Y Q E+ D
Sbjct: 121 SAEAEEIIEADLPIERVEMSREEAFEYYE--DNPFKREILEEEAAGEDPVSFYEQAEFRD 178

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG++  F  L +++GAYWRG  +  ML+R+YGTA+ ++ EL ++L   E++
Sbjct: 179 LCRGPHVASTGEIGGFALL-EISGAYWRGTEDNEMLTRVYGTAFPSESELEEFLDRREQA 237

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
           ++RDHRK+ REMDLF + +   G   +H  G  I + L  Y+R +     YEE+ TP++ 
Sbjct: 238 KERDHRKIGREMDLFSVPDHSPGCPHYHPNGMTIRRELEEYIRTQNDALGYEEVRTPELN 297

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            + LW++SGH D + +        ++       + LKPMNC  H  +++  ++SYR+LPV
Sbjct: 298 KKELWEESGHLDFFGSEGEFFLWEENET----EYGLKPMNCANHAYIYDQQVRSYRDLPV 353

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R +EFG+VYRNE SG L GL+RVRG TQDD H F  ++Q+  E  +   +I  IY+ F F
Sbjct: 354 RFSEFGNVYRNEQSGELSGLLRVRGMTQDDGHAFIRRDQIQTEITETLRVIEEIYEQFDF 413

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           E ++ KL T+ +  VGSD +W +A   ++  L+       + +   V  GE +FYGPK  
Sbjct: 414 E-VLYKLETKGDHAVGSDEVWAEATEALRNALEA------EGLEYDVEEGEASFYGPKIG 466

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
              +D +GR+W  GT+Q+DFN+P R +  Y    +E+  PVM+HRA+ GS ERF+G+MIE
Sbjct: 467 LDARDTLGREWTIGTVQLDFNIPERLDLSYTGEDNEEHRPVMVHRALLGSFERFMGVMIE 526

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +F G  P WL+P Q  +  I+   V YA+EI  +L      +  + R+ TI  KI+    
Sbjct: 527 HFNGKFPTWLAPEQVRILPISDDNVAYAEEIREVLSD--FRVGIEDRSWTIGKKIQTAHD 584

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            ++P ++I G  E +  +I +R         VS  +    L  E
Sbjct: 585 DRVPYMLIVGGNEEAAGTISVRDRFERERGDVSPEEFRTALETE 628


>gi|169629982|ref|YP_001703631.1| threonyl-tRNA synthetase [Mycobacterium abscessus ATCC 19977]
 gi|238688903|sp|B1MCK6|SYT_MYCA9 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|169241949|emb|CAM62977.1| Threonyl-tRNA synthetase [Mycobacterium abscessus]
          Length = 684

 Score =  549 bits (1415), Expect = e-154,   Method: Composition-based stats.
 Identities = 244/672 (36%), Positives = 373/672 (55%), Gaps = 47/672 (6%)

Query: 17  FPVHAT-GSDVAESISRSLAKKA-VAVAINGKVCDLS-DPVREGSIEIITPEDPRSLAVI 73
            P   T G+ V E+      + A V V ++G + DLS  P  +  +E +        +VI
Sbjct: 15  VPAGTTAGTAVREAGLPGKGEDAIVVVRVDGALKDLSWTPESDTEVEPVAANTEDGRSVI 74

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           RHS AH++A+AVQ ++P+ ++ IGP I DGFYYDF  +  F+ ++L  +EKKM++II   
Sbjct: 75  RHSAAHVLAQAVQELFPQAKLGIGPPITDGFYYDFGIDHAFTPEDLTALEKKMKQIIKEG 134

Query: 134 SPFLKQYL-SHEKARELFESKKEAYKVEILESIPAKENVTLYRQG--------------- 177
             F ++   S E+A+   E   E +K+E++      ++  +   G               
Sbjct: 135 QRFSRRVYESVEEAQA--ELANEPFKLELVSDKSGADDPEVMEVGGDELSAYDNLNPRTG 192

Query: 178 --EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
             EWFDLCRGPH+ +T  +  F        AYWRG+     + R+YGTAW +Q+ L ++L
Sbjct: 193 EREWFDLCRGPHIPTTKHIPAFRLTRSS-AAYWRGNQANASMQRVYGTAWESQEALDKHL 251

Query: 236 YFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEE 293
             LEE+++RDHRKL  E+DLF   ++ GSG+  +H KG  + + L  Y R +     YE 
Sbjct: 252 ELLEEAQRRDHRKLGVELDLFSFPDEIGSGLPVFHPKGGIVRKELEDYSRAKHTAAGYEF 311

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD-------LRTFALKPMNCPGHVA 346
           +NTP +  ++L+Q SGH D Y   MF     D  + +        + + LKPMNCP H  
Sbjct: 312 VNTPHITKENLYQTSGHLDWYSDGMFPPMHIDAELNEDGTVRKPGQNYYLKPMNCPMHHL 371

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           ++    +SYRELP+RL EFGSVYR E SG +HGL RVRG TQDDAH++ T+EQM  E   
Sbjct: 372 IYRARGRSYRELPLRLFEFGSVYRYEKSGVVHGLTRVRGMTQDDAHIYTTREQMHEELTS 431

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPE-KRVGSDALWDDAENIMKG-VLDTIKNSSQDRIN 464
           +   ++ +  D+G +   ++LST+ E K VGSD +W++A   ++   LD+        + 
Sbjct: 432 LLRFVLDLLSDYGLDDFYLELSTKDEAKFVGSDEVWEEATKTLEQVALDS-------GLQ 484

Query: 465 TGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIH 524
                G  AFYGPK     KDA+GR WQ  TIQ+DFN+P RFN  Y  +   +  PV+IH
Sbjct: 485 LVPDPGGAAFYGPKISVQAKDALGRSWQMSTIQLDFNMPERFNLEYTAADGTRKQPVLIH 544

Query: 525 RAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIET 584
           RA+FGSIERF G++ E++ G  P WLSP+QA+   I  +   Y  +I + LK+  +  E 
Sbjct: 545 RALFGSIERFFGVLTEHYAGAFPAWLSPVQAVGIPIADAHAPYLNDIVSQLKAQGIRAEV 604

Query: 585 DFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT-- 642
           D  ++ +N KI  H+ +++P +++ GD++    ++  R    T    V   +A+  +   
Sbjct: 605 DSSDDRMNKKIVNHTNQRVPFLLLAGDRDVEAGAVSFRFRDRTQVNGVPRDEAVAAIVDW 664

Query: 643 ---KESLPPDCQ 651
              +E++ P  +
Sbjct: 665 VNRRENVSPTAE 676


>gi|166365900|ref|YP_001658173.1| threonyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
 gi|166088273|dbj|BAG02981.1| threonyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
          Length = 618

 Score =  549 bits (1415), Expect = e-154,   Method: Composition-based stats.
 Identities = 258/608 (42%), Positives = 360/608 (59%), Gaps = 37/608 (6%)

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            +  ED + +  IRH+CAHI+A AVQ+++PE +VAIGP  E GFYYDFD+  PF+ ++L 
Sbjct: 13  PVIEEDSQKIVKIRHTCAHILAMAVQTLFPETKVAIGPWTETGFYYDFDRPTPFTPEDLE 72

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE-- 178
           +I  +M  II ++ P +++ L   +     E   + YK  ILE IP  E +T Y  G   
Sbjct: 73  KIAAEMGRIIGKNLPIIREVLERSEITAEIERLNQPYKRSILERIPPDETITRYFIGSPD 132

Query: 179 ---------------------WFDLCRGPHVRSTGQVKK-FFKLMKVAGAYWRGDSNRPM 216
                                W+DLC GPH+ STG++    F L  VAGAYW+GD  +P 
Sbjct: 133 AGRSDREPSLIDGAVSPPEEFWWDLCAGPHLNSTGEINPDAFALESVAGAYWQGDEKQPQ 192

Query: 217 LSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKI 275
           L RIYGTAW T  EL  YL   EE+++RDHRKL +++ LF I ED G G++FWH +G  +
Sbjct: 193 LQRIYGTAWQTPAELQNYLQQKEEAQRRDHRKLGQQLKLFSIQEDAGGGLVFWHPRGATM 252

Query: 276 FQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
              +  Y R+  ++  Y+ + TP + +  LW+ SGHWD YR NMF          + +++
Sbjct: 253 RYLIEDYWRQAHLEAGYQFLYTPHLANLDLWKTSGHWDFYRDNMFEAIEL-----EQQSY 307

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
            +KPMNCP HV  + + L SYRE P+R AE G+VYR E SG LHGLMRVRGFTQDDAH+F
Sbjct: 308 QIKPMNCPFHVLTYQNDLHSYREFPLRWAELGTVYRYERSGVLHGLMRVRGFTQDDAHIF 367

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDT 454
           C  EQ+  E L + NL   I  DFGF    + LSTRP K VGSD++W+ A   +   L+ 
Sbjct: 368 CLPEQIAAEILGVLNLTEKILSDFGFTNYQINLSTRPSKSVGSDSVWELATAALIEALNA 427

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH 514
                  + +     G GAFYGPK +  ++DAIGR WQC TIQVDFNLP RF+  YV   
Sbjct: 428 ------KKWDYIEDQGGGAFYGPKIDIKIQDAIGRMWQCSTIQVDFNLPERFDMQYVARD 481

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANL 574
             +  P+MIHRA+FGS+ERF GI+IEN+ G+ PLWL+PIQ  +  ++     YA  +A  
Sbjct: 482 GTRERPIMIHRAIFGSLERFFGILIENYAGDFPLWLAPIQVRLLPVSDEQQHYALGVAMQ 541

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           LK     +E D   E +  +IR   ++KIP++ + G +E S +++ +R         ++L
Sbjct: 542 LKQAGYRVEIDKTGERLGKQIRTGELEKIPVLAVIGKREVSSKTLSVRTRQGGDLGSMTL 601

Query: 635 LDAIPILT 642
           +D +  + 
Sbjct: 602 VDLLGKMQ 609


>gi|159030629|emb|CAO88297.1| thrS [Microcystis aeruginosa PCC 7806]
          Length = 599

 Score =  549 bits (1415), Expect = e-154,   Method: Composition-based stats.
 Identities = 241/595 (40%), Positives = 360/595 (60%), Gaps = 16/595 (2%)

Query: 55  REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPF 114
            +  I++    +   L  IRH+ +H+MA AVQ ++P+ QV IGP  E GFYYDFD  +PF
Sbjct: 3   NQAPIKLPKTSESDHLKRIRHTTSHVMAMAVQKLFPQAQVTIGPWTETGFYYDFDVPEPF 62

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
           +  +L  I+K+M +II +  P +++ +S E+A +  ++  E YK+EIL  I  +E +TLY
Sbjct: 63  TDKDLKDIKKEMVKIINKKLPVIREQVSREEAEKRIKAINEPYKLEILAGI--QEPITLY 120

Query: 175 RQGE-WFDLCRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELT 232
             G+ W+DLC GPH+ +T ++  K  +L  VAGAYWRGD N+  L RIYGTAW   Q+L 
Sbjct: 121 HLGDAWWDLCAGPHLDNTSELDPKAIELETVAGAYWRGDENKAQLQRIYGTAWENPQQLA 180

Query: 233 QYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDD 290
           +Y    EE+ KRDHRKL +E+ LF  ++  G G+  W  KG  I   L  +++  ++K  
Sbjct: 181 EYKRRKEEALKRDHRKLGKELGLFIFSDSVGPGLPLWTPKGTLIRSLLEDFLKKEQLKRG 240

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR-TFALKPMNCPGHVAVFN 349
           Y  + TP +    L++ SGHW  Y+ +MF +   D+        F LKPMNCP H+ ++ 
Sbjct: 241 YLPVVTPHIARVDLFKISGHWQKYKEDMFPMMADDEESASKEIGFVLKPMNCPFHIQIYK 300

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
             L+SYRELP+RLAEFG+VYR E SG L GL RVRGFT DD+H+F T EQ+  E L + +
Sbjct: 301 SDLRSYRELPMRLAEFGTVYRYEQSGELGGLTRVRGFTVDDSHLFVTPEQLDKEFLSVVD 360

Query: 410 LIISIYKDFGFEKIMVKLSTRPEK---RVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           LI++++K    +    +LS R  +    +GSD  W+ A++ ++  + T+       ++  
Sbjct: 361 LILTVFKSLQLKNFKARLSFRDPESDKYIGSDEAWEKAQSAIRKAVQTLG------MDYF 414

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
              GE AFYGPK ++I +DA+ R+WQ GT+QVD+NLP RF   YV     +  PVMIHRA
Sbjct: 415 EAPGEAAFYGPKLDFIFQDALEREWQLGTVQVDYNLPERFELEYVAEDGNRKRPVMIHRA 474

Query: 527 VFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF 586
            FGS+ER IGI+IE + G+ PLWL+P+Q  +  ++ S ++YA+E+   ++   +  ETD 
Sbjct: 475 PFGSLERLIGILIEEYAGDFPLWLAPVQIRLLPVSDSQLDYAKEVTVKMQLLGIRAETDT 534

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
             E +   IR     KIP++ + G KE    S+ IR   +     +S+ + +  L
Sbjct: 535 SGERLGKMIRNAETAKIPVMAVVGAKEMESNSLSIRTRAAGDLGVISVEEVVAKL 589


>gi|229820470|ref|YP_002881996.1| threonyl-tRNA synthetase [Beutenbergia cavernae DSM 12333]
 gi|229566383|gb|ACQ80234.1| threonyl-tRNA synthetase [Beutenbergia cavernae DSM 12333]
          Length = 671

 Score =  549 bits (1414), Expect = e-154,   Method: Composition-based stats.
 Identities = 248/669 (37%), Positives = 371/669 (55%), Gaps = 50/669 (7%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
           MP DI++   DG+ ++    ATG+           +  VA+ ++G++ DL   +R+G+ +
Sbjct: 1   MP-DIRVHL-DGAPRDLEAPATGTTAYAD-----DRTVVALRVDGELRDLDTQLRDGAHV 53

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           E +T + P  LA++RHS AH++A+AVQ + P+ ++ IGP I DGFYYDFD E PF+ ++L
Sbjct: 54  EGVTIDSPDGLAILRHSTAHVLAQAVQQVNPDAKLGIGPPITDGFYYDFDVETPFTPEDL 113

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL--------------ESI 165
             +EK M  I+     F ++ +S ++AR   E   E YK+E++               + 
Sbjct: 114 KALEKAMARIVKEGQTFRRRVVSDDEARA--ELADEPYKLELIGLKGPGAASAAEGAGAE 171

Query: 166 PAKENVTLYRQG----------EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRP 215
                +T+Y              W DLCRGPH+ ST  +   F LM+ A AYWRG    P
Sbjct: 172 VGAGELTIYDNVRGAGRETETVVWKDLCRGPHLPSTRLIGNGFSLMRSAAAYWRGSEKNP 231

Query: 216 MLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWK 274
            L R+YGTAW T+ +L  +L  L E+E+RDHR+L  E+DLF + E+ GSG+  +H KG  
Sbjct: 232 QLQRVYGTAWPTKDDLRAHLERLAEAERRDHRRLGSELDLFSVPEEIGSGLAVFHPKGSV 291

Query: 275 IFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTI----- 328
           I   +  Y RR  ++  Y+   TP +   HL++ S H + Y   M+     D        
Sbjct: 292 IRMEMEDYSRRRHVEAGYDFAYTPHITKAHLFETSRHLEWYADGMYPPMQLDAEHHEDGT 351

Query: 329 --KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
             ++ + + LKPMNCP H  VF    +SYRELP+RL EFG+VYR E SG +HGL R RGF
Sbjct: 352 LKREGQDYYLKPMNCPMHNLVFAARGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGF 411

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR-VGSDALWDDAE 445
           TQDDAH++CT+EQM +E   +   ++ + +D+G E+  ++LSTR  ++ VG DA WD+A 
Sbjct: 412 TQDDAHIYCTREQMRDELASLLTFVLDLLRDYGLEEFYLELSTRDPEKSVGDDATWDEAT 471

Query: 446 NIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSR 505
             ++ V           +      G  AFYGPK     +DAIGR WQ  TIQ+DF  P  
Sbjct: 472 ATLRDVATASG------LELVDDPGGAAFYGPKISVQARDAIGRSWQLSTIQLDFFEPGL 525

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAV 565
           F+  Y  S   +  PVMIHRA+FGSIERF  I++E++ G +P WL+P+Q     +     
Sbjct: 526 FDLEYTASDGSRQQPVMIHRALFGSIERFFAILLEHYAGAMPPWLAPVQVRAVPVAEPFN 585

Query: 566 EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
            Y  ++   L++  +  E D  ++  N KIR  + +KIP ++I G ++A   ++  R   
Sbjct: 586 AYLADVVAQLRAASVRAELDDGDDRFNKKIRTATTQKIPFVLIAGGEDAEAGAVSFRYRD 645

Query: 626 STTTQKVSL 634
            T    V +
Sbjct: 646 GTQRNGVPV 654


>gi|296814972|ref|XP_002847823.1| threonyl-tRNA synthetase [Arthroderma otae CBS 113480]
 gi|238840848|gb|EEQ30510.1| threonyl-tRNA synthetase [Arthroderma otae CBS 113480]
          Length = 739

 Score =  549 bits (1414), Expect = e-154,   Method: Composition-based stats.
 Identities = 229/688 (33%), Positives = 356/688 (51%), Gaps = 65/688 (9%)

Query: 4   DIKLTFP--DG---SIKNFPVHATGSDVAESISRSLAKKAVAVAING-KVCDLSDPVR-E 56
           DI +T    DG   ++      +T     + I + ++   V   ++G ++ DL  P+  +
Sbjct: 56  DITVTLEVGDGAPSTVIAKAWQSTPGSFLKDIPKEISSSVVIAKLDGKELWDLDRPLERD 115

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD--KEQPF 114
             I  +  +      V  HS AH + EA +  +    ++ GP    GF+YD         
Sbjct: 116 CRIRFLPFDSAEGREVFWHSSAHALGEACECQY-GCLLSHGPPTAHGFFYDMAIPNGGVV 174

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
           +  +   ++ K   I      F +  +S E  +++F   K  YK+  ++++   E+ T+Y
Sbjct: 175 TQGDWPSLDSKTTRIFKEKQSFDRLEVSKENLKKMFGYSK--YKLHYIDNLIEGESSTVY 232

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
           R G   DLCRGPH+++TG++K   K+M+ + AY+ GD     L RI G A+  ++ L ++
Sbjct: 233 RCGTLVDLCRGPHIQNTGKIK-AMKIMQNSSAYFLGDQTNDALQRIRGVAFPDKKLLQEH 291

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEE 293
           L F+EE+EKR+H+K+ +E +LF   E   G  F    G KIF  L   +R + +   Y+E
Sbjct: 292 LKFMEEAEKRNHQKIGKEQELFFFDEVSPGCPFLLPNGTKIFNALQKLLRTEYRKRGYQE 351

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           + +P + D  +W+QSGHW  Y+ +MF +        + R +ALKPMNCPGH  +F H  +
Sbjct: 352 VQSPNMYDVGIWRQSGHWAHYKDDMFKLDV------EKRDWALKPMNCPGHCIMFGHRER 405

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYRELP+R+A+FG ++RNE SG+LHGL RVR F QDD H+FCT  Q+  E   + + + +
Sbjct: 406 SYRELPLRMADFGVLHRNEASGALHGLTRVRKFQQDDTHIFCTDNQIMEEIEGLFDFLRA 465

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           IY  FGF    +KLSTRPEK +G    WD AE  ++  L   K +  D     +  G+GA
Sbjct: 466 IYGLFGF-SFKLKLSTRPEKYLGKLETWDYAEAQLREALTKFKGADWD-----IDEGDGA 519

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC--------------- 518
           FYGPK +  + DA+ R+ QC TIQ+D+ LP  F   Y+   +                  
Sbjct: 520 FYGPKIDITISDALKREHQCATIQLDYQLPLNFKLEYMTGETVPKSAAPADPQAEAKPED 579

Query: 519 --------------------HPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVT 558
                                PV+IHRA+ GS ERF GI+IE+F G  P WLSP Q ++ 
Sbjct: 580 DSKRAQAPTADPAAPGPGRARPVVIHRAIIGSFERFFGILIEHFGGKWPFWLSPRQILIV 639

Query: 559 TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERS 618
            + +SA +Y +E+  +L+   L+++ D    T+  KIR   + +   I + G +E   RS
Sbjct: 640 PVMASANDYVEELQEILRGDKLNVDIDLSGHTMQKKIRNGQLAQYNFIFVVGAQEKESRS 699

Query: 619 IGIRRFGSTTTQK----VSLLDAIPILT 642
           + IR     ++Q     V L +A   L 
Sbjct: 700 VNIRNRDDPSSQTKGSLVPLEEARAKLR 727


>gi|221056250|ref|XP_002259263.1| threonine--trna ligase [Plasmodium knowlesi strain H]
 gi|193809334|emb|CAQ40036.1| threonine--trna ligase, putative [Plasmodium knowlesi strain H]
          Length = 888

 Score =  548 bits (1413), Expect = e-154,   Method: Composition-based stats.
 Identities = 243/735 (33%), Positives = 382/735 (51%), Gaps = 112/735 (15%)

Query: 4   DIKLTFPDGSIKNFPVH-ATGSDVAESISRSLAKKAVAVAI------------------- 43
            I +   DGS+K    +  T   +A SIS+ LA+ ++   +                   
Sbjct: 149 SINVQLLDGSVKVGQCNVTTPFHIATSISKRLAEDSIVARVTYVEKVELELCDIEEELEE 208

Query: 44  --------------NGKV-------CDLSDPV-REGSIEIITPEDPRSLAVIRHSCAHIM 81
                          G++        D++ P+     IE +  E+  +     HS AHI+
Sbjct: 209 QDEVNETKDETLGCKGQLADEKPLLWDMNVPLLGSCKIEFLNLENEEAKKTFWHSSAHIL 268

Query: 82  AEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQIEKKMQEIIARDSPFLKQY 140
             +++ ++    + IGP +++GFYYD    +   ++++  +IE++  ++I +++ F K  
Sbjct: 269 GSSLEKLFGG-YLTIGPPLKEGFYYDIYLGDFSITNEDYKKIEEEFNKLIKQNAEFEKLI 327

Query: 141 LSHEKARELFESKKEAYKVEILES-IPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFK 199
            + ++  ELF+     +K+E+++S IP  +  ++Y+ G + DLC GPH++STG+ K F K
Sbjct: 328 CTKDEVMELFQY--NPFKLELIKSKIPENKKTSVYKCGNFIDLCLGPHIKSTGKAKAF-K 384

Query: 200 LMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIA 259
           ++K + AYW G+ N   L RIYG  +  + EL  YL FLEE++KRDHR + +++  F   
Sbjct: 385 VLKNSAAYWLGNKNNDSLQRIYGITFQKKTELNDYLNFLEEAKKRDHRNVGKKLHFFFFD 444

Query: 260 EDGSG-VIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRAN 317
           +D S    FW   G KI+  L+ ++RR+ +   Y+E+ TP V    LW+ SGH+ +Y+  
Sbjct: 445 KDTSPGSCFWLPHGAKIYNKLVDFIRREYRIRMYDEVITPNVFSCDLWRTSGHYQNYKDC 504

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           MF          + + + +KPMNCPGH  +F     SYR LP+RLA+FG ++RNE SGSL
Sbjct: 505 MFIFNV------EQKEWGMKPMNCPGHCIMFKQLNASYRSLPIRLADFGVLHRNEISGSL 558

Query: 378 HGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGS 437
            GL RVR F QDD+H+FCT +Q+  E L   + I  IY  FGF+  +  LSTRP+K +G+
Sbjct: 559 SGLTRVRRFQQDDSHIFCTFDQIKEEVLNTLHFIFFIYDLFGFKYEL-FLSTRPKKFIGN 617

Query: 438 DALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ 497
            + WD AE  +K  L++        I+  +  G+GAFYGPK + +L+D+I R  QCGTIQ
Sbjct: 618 ISTWDFAEQGLKDALNSAN------ISWKINEGDGAFYGPKIDILLRDSINRTHQCGTIQ 671

Query: 498 VDFNLPSRFNAFYVNSH--------------------SEKC------------------- 518
           +DF LP RFN  Y N                      +EK                    
Sbjct: 672 LDFQLPCRFNLQYKNKDFGALNEGDNAESGTMKREEVAEKGEGNQPSQNKGSDTNLPTDT 731

Query: 519 ---------HPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQ 569
                     PV+IHRA+ GS+ERF+ I+IE+  G LP W+SP QAIV  ++    +YA 
Sbjct: 732 AEQLKKGFDRPVIIHRAILGSVERFVAILIEHTAGKLPFWISPRQAIVLPVSDKFNDYAN 791

Query: 570 EIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
            +   L +H   +E D    T+N KIRE  + +   I++ G+KE +  ++ +R       
Sbjct: 792 YVYQTLNNHFFDVEIDTSLNTLNKKIREAQLNQFNFILVVGEKELTTNTVTVRNRDDQNN 851

Query: 630 QKV-SLLDAIPILTK 643
            +V SL + I    K
Sbjct: 852 HEVCSLEELIARFRK 866


>gi|308233449|ref|ZP_07664186.1| threonyl-tRNA synthetase [Atopobium vaginae DSM 15829]
 gi|328944509|ref|ZP_08241970.1| threonine--tRNA ligase [Atopobium vaginae DSM 15829]
 gi|327490910|gb|EGF22688.1| threonine--tRNA ligase [Atopobium vaginae DSM 15829]
          Length = 592

 Score =  548 bits (1413), Expect = e-154,   Method: Composition-based stats.
 Identities = 247/594 (41%), Positives = 364/594 (61%), Gaps = 21/594 (3%)

Query: 55  REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-- 112
            +G +E    +      VIRHSCAH++A+AV+ ++P+   A GP  E GFYYD +  +  
Sbjct: 6   NDGRVEECPKDMEE--HVIRHSCAHMLAQAVKRLYPQAHFAYGPATETGFYYDMEFPEGV 63

Query: 113 PFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVT 172
             S D+L  +E +M++I   +       L   +A    E + E +KVE +   P    +T
Sbjct: 64  KISEDDLPALEAEMKKISKENLKVETFELPRAQAIAFLEERGEKFKVEHIGDFPEDTRLT 123

Query: 173 LYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELT 232
            Y+QGE+ D+C GPHV  T   K F KL  V+GAYW+ +S+  ML+RI G A+ T++EL 
Sbjct: 124 FYKQGEYVDMCTGPHVCYTKMAKAF-KLTGVSGAYWKANSDNEMLTRISGVAFVTKEELA 182

Query: 233 QYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDY 291
           ++   + E+EKRDHRK+ REMDLF + E G G  FW   G +I   L++Y +  + K  Y
Sbjct: 183 EHERLMAEAEKRDHRKIGREMDLFMVNEAGPGFPFWLPNGMRIRNALMNYWQEMQEKFGY 242

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           E+I TP +L + LW+ SGHWD Y+ NM+  K       D   FA+KPMNCPG   V+ + 
Sbjct: 243 EQIQTPVILSRKLWETSGHWDHYKENMYTTKI------DEEDFAIKPMNCPGACLVYMNK 296

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI 411
            +SYR+LP++LAE G  +R+E  G+LHGL RVR FTQDDAH+F   +Q+ +E  ++ +LI
Sbjct: 297 PRSYRDLPLKLAEAGLDHRHELKGTLHGLFRVREFTQDDAHLFIRPDQICDEVAEVTHLI 356

Query: 412 ISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
            + YK FGF    V+LSTRPE  +GSD  W  AE+ ++  L+T+       +   +  G+
Sbjct: 357 TAYYKQFGF-PYKVELSTRPENSMGSDEDWKTAEDGLRNALETMG------LEYTINEGD 409

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
           GAFYGPK ++ LKD +GR WQCGTIQ+DF  P  FN  YV+   +K  P+MIHRA FGS 
Sbjct: 410 GAFYGPKIDFHLKDCLGRTWQCGTIQLDFQFPHNFNLEYVDKDGQKKRPIMIHRAGFGSF 469

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           ERFIG++IE ++G  P+WL+P+Q  V  ++     YA+E+   L+   + ++ D R+E I
Sbjct: 470 ERFIGMLIEQYEGKFPVWLAPLQVKVLPVSEKTRAYARELTQKLRDLKIRVKLDDRDEKI 529

Query: 592 NYKIREHS-IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            YKIRE   I ++P ++I G++EA   +I +R   + TT++ +  D + +L  +
Sbjct: 530 GYKIREARSIDRVPYMLIVGEQEAQAGNISVRDR-TNTTKQYAFDDFVALLQAQ 582


>gi|167756637|ref|ZP_02428764.1| hypothetical protein CLORAM_02174 [Clostridium ramosum DSM 1402]
 gi|237733925|ref|ZP_04564406.1| threonyl-tRNA synthetase [Mollicutes bacterium D7]
 gi|167702812|gb|EDS17391.1| hypothetical protein CLORAM_02174 [Clostridium ramosum DSM 1402]
 gi|229383006|gb|EEO33097.1| threonyl-tRNA synthetase [Coprobacillus sp. D7]
          Length = 577

 Score =  548 bits (1413), Expect = e-154,   Method: Composition-based stats.
 Identities = 224/587 (38%), Positives = 364/587 (62%), Gaps = 18/587 (3%)

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDEL 119
           +I  ++   L+V+ HSCAH+MA+A++ ++P+ +  +GP++ +GFYYD D        +++
Sbjct: 1   MIDFKEDEKLSVLNHSCAHVMAQAIKHLYPQAKFWVGPVVSEGFYYDVDLGNDVIKDEDI 60

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IEK+M++I        +Q +S E+A E+F+   + YK++++ +      ++ YRQG++
Sbjct: 61  PKIEKEMKKICKDGKRITRQEISKEEALEMFK--DDEYKIDLINNFENDTTISCYRQGDF 118

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV +    K F KL K +GAYW+GD    +L RIYG  + T ++L ++L  LE
Sbjct: 119 VDLCRGPHVETVKACKNF-KLTKHSGAYWKGDKENKVLQRIYGVCFETSEDLAKHLELLE 177

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+++RDH+KL +E+ LF ++E   G+ F+  KG  +  TL  +   +  K+ YE I TP 
Sbjct: 178 EAKRRDHKKLGKELGLFMMSEYAPGMPFFLPKGMILRNTLEQFWYEEHAKEGYEFIKTPI 237

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++ + LW+ SGHW++Y+ +M+          D R FA+KPMNCPG + V+ + L SY++L
Sbjct: 238 MMSRELWETSGHWENYKEDMYTSMV------DDREFAIKPMNCPGSLLVYKNSLHSYKDL 291

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+ E G V+R+E SG+L+GL RVR FTQDDAH++ T +Q+  E +++ N I  +Y   
Sbjct: 292 PLRMGELGQVHRHEASGALNGLFRVRTFTQDDAHIYMTPDQIEGEIIRLINFIDRVYGSL 351

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
                +   +   +K +G  A+W+ +E  +               +  V  G+GAFYGPK
Sbjct: 352 NLSYEIELSTRPEKKYIGDLAIWEKSEAALAAACKAAGK------DYKVNPGDGAFYGPK 405

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++ +KD++GR WQCGTIQ+D NLP RF+  Y++   EK  PVM+HR +FGSIERFIGI+
Sbjct: 406 LDFHVKDSLGRVWQCGTIQLDMNLPERFDITYIDDKGEKVRPVMLHRVIFGSIERFIGIL 465

Query: 539 IENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           IE+F G  PLWL+P+Q  V  + +   ++YA+E+  LLK     +E D R E + Y+IRE
Sbjct: 466 IEHFAGVFPLWLAPVQVKVLPVNNEYHLDYAKEVTELLKDKGFKVELDAREEKLGYRIRE 525

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
             ++K+P +++ G+ E  E+++  R+ G      V   D + +L ++
Sbjct: 526 GQMEKVPYLLVLGNNERDEKTVTYRKHGEQKQITVPFDDFVAMLNQQ 572


>gi|326382111|ref|ZP_08203803.1| threonyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
 gi|326198841|gb|EGD56023.1| threonyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
          Length = 700

 Score =  548 bits (1413), Expect = e-154,   Method: Composition-based stats.
 Identities = 244/684 (35%), Positives = 372/684 (54%), Gaps = 51/684 (7%)

Query: 1   MPSDI----KLTFPDGSIKNFPVHATGSDVAES--------ISRSLAKKAVAVA-INGKV 47
           MP ++    ++  P+ +++  P   T               +     +  V V   +G +
Sbjct: 1   MPDNVASAERVRLPE-TVR-VPAGTTAGAAMRDADLPDGYELPNKGPQAVVVVREADGTL 58

Query: 48  CDLSD-PVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYY 106
            DLS  P  +  +E +T +     +VIRHSCAH++A+AVQ + P+  + IGP I DGFYY
Sbjct: 59  RDLSWVPDVDAHVEPVTADSEDGRSVIRHSCAHVLAQAVQELNPQAHLGIGPPITDGFYY 118

Query: 107 DFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIP 166
           DF+   PF+ ++L  +EK+M++II     F ++    + A    E   E +K+E+++   
Sbjct: 119 DFEVADPFTPEDLKALEKQMKKIIKSGQRFSRRVYESKDA-ARDELANEPFKLELIDDKG 177

Query: 167 AKENVTLYRQGE-----------------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWR 209
           A ++  +   G                  W DLCRGPHV +T  +  F KL + + AYWR
Sbjct: 178 AADDAEIMEVGGAELTAYDNLNPRTGERVWGDLCRGPHVPTTKYIAAF-KLTRSSAAYWR 236

Query: 210 GDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFW 268
           GD +   L R+YGTAW + + +  YL  L E+EKRDHR+L  E+DLF   ++ GSG+  +
Sbjct: 237 GDQSLADLQRVYGTAWESTEAMDAYLDRLAEAEKRDHRRLGAELDLFSFPDELGSGLPVF 296

Query: 269 HRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
           H KG  I + +  Y R +     YE +NTP +    L++ SGH D Y   MF     D  
Sbjct: 297 HPKGGIIRKEMEDYSREQHAAGGYEFVNTPHLTKSTLFEVSGHLDWYADGMFPPMHLDAE 356

Query: 328 IKD-------LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
             +        + + +KPMNCP H  +F    +SYRELP+RL EFGSVYR E SG +HGL
Sbjct: 357 YNEDGTLRKPGQDYYVKPMNCPMHNLIFGSRGRSYRELPLRLFEFGSVYRYEKSGVVHGL 416

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE-KRVGSDA 439
            R RGFTQDDAH++CT+EQ+  E     N ++ + KD+G +   ++LST+   K VGSD 
Sbjct: 417 TRARGFTQDDAHIYCTQEQVVEELTTTLNFVLQLLKDYGLDDFYLELSTKDPAKYVGSDE 476

Query: 440 LWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVD 499
           +WD+A   ++ V ++        +         AFYGPK    +KDA+GR WQ  TIQ+D
Sbjct: 477 VWDEATETLRQVGESSG------LELVPDPEGAAFYGPKISVQVKDALGRTWQMSTIQLD 530

Query: 500 FNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTT 559
           FNLP RF   Y  +   K  PVMIHRA+FGSIERF G++ E++ G  P+WLSP+Q +   
Sbjct: 531 FNLPERFQLEYTATDGTKKRPVMIHRALFGSIERFFGVLTEHYAGAFPVWLSPVQVVGIP 590

Query: 560 ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSI 619
           +  +  ++ Q + + LK   +  E DF ++ +  KIR H+  K+P +++ G+++    ++
Sbjct: 591 VAEAFADHLQNVVSRLKGRRVRAEVDFSDDRMQKKIRNHTTAKVPFMLLAGERDVQANAV 650

Query: 620 GIRRFGSTTTQKVSLLDAIPILTK 643
             R    T    V + +AI  + +
Sbjct: 651 SFRFRDGTQLNGVPVDEAIVAIDE 674


>gi|332708267|ref|ZP_08428248.1| threonyl-tRNA synthetase [Lyngbya majuscula 3L]
 gi|332352932|gb|EGJ32491.1| threonyl-tRNA synthetase [Lyngbya majuscula 3L]
          Length = 605

 Score =  548 bits (1413), Expect = e-154,   Method: Composition-based stats.
 Identities = 230/594 (38%), Positives = 360/594 (60%), Gaps = 16/594 (2%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSD 117
            I +    +  +L  +RH+ +H+MA AVQ ++P+ QV IGP IE+GFYYDFD+ +PF+  
Sbjct: 12  KIHLPRTSESDTLKRLRHTTSHVMAMAVQKLFPKAQVTIGPWIENGFYYDFDQPEPFTEQ 71

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +L +I+K+M +II R  P +++ +  E+A++  +   E YK+EIL  +  ++ +++Y  G
Sbjct: 72  DLKKIQKEMVKIIKRKLPVIREEVPREEAQQRIKELGEPYKLEILADL--EDPISIYHLG 129

Query: 178 E-WFDLCRGPHVRSTGQVKK-FFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
           + W+DLC GPHV +T ++     +L  VAGAYWRGD++   L RIYGTAW   ++L +Y 
Sbjct: 130 DQWWDLCAGPHVENTSEINPKAIELESVAGAYWRGDASNAQLQRIYGTAWENPEQLQEYK 189

Query: 236 YFLEESEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEE 293
              +E+ KRDHRKL +E+ LF  +   G G+  W  KG  +   L  +++  ++K  Y  
Sbjct: 190 RRKQEALKRDHRKLGKELGLFIFSDPVGPGLPLWTPKGTVLRTLLEDFLKQEQVKRGYLP 249

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL-RTFALKPMNCPGHVAVFNHGL 352
           + TP +    L++ SGHW +Y+ +MF +   D+      + F LKPMNCP H+ ++   L
Sbjct: 250 VVTPHIGRVDLFKVSGHWQNYKEDMFPMMAEDEEAAAAEQGFVLKPMNCPFHIQIYKSEL 309

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
           +SYRELP+RLAEFG+VYR E SG L GL RVRGFT DD+H+F   +Q+  E L + +LI+
Sbjct: 310 RSYRELPMRLAEFGTVYRYEQSGELGGLTRVRGFTVDDSHLFVMPDQLDQEFLSVVDLIL 369

Query: 413 SIYKDFGFEKIMVKLSTRPE---KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL 469
           S++K    +    +LS R     K +GSD  W+ A++ ++  +DT+       + +    
Sbjct: 370 SVFKSLQMKNFKARLSFRDPASDKYIGSDQAWEKAQSAIRRAVDTLG------MESFEAP 423

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG 529
           GE AFYGPK ++I +D + R+WQ GT+QVD+NLP RF+  YV     +  P+MIHRA FG
Sbjct: 424 GEAAFYGPKLDFIFQDILDREWQLGTVQVDYNLPERFDLEYVAEDGTRQRPIMIHRAPFG 483

Query: 530 SIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE 589
           S+ER  GI+IE + G+ P WL+P+QA +  +  + + +AQE+A  ++SH +  E D   E
Sbjct: 484 SLERLTGILIEQYGGDFPFWLAPVQARLLPVGDAQLPFAQEVAAKMRSHGIRAEVDTSGE 543

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +   IR     KIP++ + G KE    S+ IR   +     + +   +  + +
Sbjct: 544 RLGKAIRNAEKAKIPVMSVVGAKEVEANSLNIRTRAAGELGMMPIDQVVEKMEQ 597


>gi|240170657|ref|ZP_04749316.1| threonyl-tRNA synthetase [Mycobacterium kansasii ATCC 12478]
          Length = 697

 Score =  548 bits (1413), Expect = e-154,   Method: Composition-based stats.
 Identities = 247/647 (38%), Positives = 368/647 (56%), Gaps = 45/647 (6%)

Query: 37  KAVAVAINGK--VCDLSDPVREGSIEIIT--PEDPRSLAVIRHSCAHIMAEAVQSIWPEV 92
            A+ V  +G+  + DLS  V +  +E+I          +VIRHS AH++A+AVQ ++P  
Sbjct: 50  DAIVVVRDGEGKLRDLSW-VPDADVEVIPVPANTDDGRSVIRHSTAHVLAQAVQELFPHA 108

Query: 93  QVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYL-SHEKARELFE 151
           ++ IGP I DGFYYDFD  +PF+ ++LA +EK+M++I+     F ++   S ++AR   E
Sbjct: 109 KLGIGPPITDGFYYDFDVAEPFTPEDLAALEKRMRQIVKEGQLFDRRVYESKDQARA--E 166

Query: 152 SKKEAYKVEILESIPAKENV--------TLY-------RQGEWFDLCRGPHVRSTGQVKK 196
              E YK+E+++      +V        T Y       RQ  W DLCRGPH+ +T  +  
Sbjct: 167 LANEPYKLELVDDKSGDPDVMEVGGDELTAYDNLNPRTRQRVWGDLCRGPHIPTTKHIPA 226

Query: 197 FFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLF 256
           F KL + + AYWRGD     L RIYGTAW +Q+ L ++L  +EE+++RDHRKL  E+DLF
Sbjct: 227 F-KLTRSSAAYWRGDQRNASLQRIYGTAWESQEALDRHLELIEEAQRRDHRKLGVELDLF 285

Query: 257 HIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSY 314
              ++ GSG+  +H KG  + + L  Y RRK  +  Y+ +N+P +    L+  SGH D Y
Sbjct: 286 SFPDEIGSGLAVFHPKGGIVRRELEDYSRRKHTEAGYQFVNSPHITKAQLFHTSGHLDWY 345

Query: 315 RANMFAVKCADDTI-------KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGS 367
              MF     D          K  + + LKPMNCP H  +F    +SYRELP+RL EFG+
Sbjct: 346 ADGMFPPMHIDAEHNADGSVRKPGQDYYLKPMNCPMHCLIFRARGRSYRELPLRLFEFGT 405

Query: 368 VYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKL 427
           VYR E SG +HGL RVRG T DDAH+F T++QM +E   +   I+ +  D+G     ++L
Sbjct: 406 VYRYEKSGVVHGLTRVRGLTMDDAHIFSTRDQMRDELRSLLRFILDLLGDYGLTDFYLEL 465

Query: 428 STRPEK-RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDA 486
           ST+     VGSD +W++A N++  V       ++  ++     G  AFYGPK    +KDA
Sbjct: 466 STKDPDKFVGSDEVWEEATNVLAEV------GAESGLDLVPDPGGAAFYGPKISVQVKDA 519

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNL 546
           +GR WQ  TIQ+DFN P RF   Y  +   +  PVMIHRA+FGSIERF GI+ E++ G  
Sbjct: 520 LGRTWQMSTIQLDFNFPERFELDYTAADGTRQRPVMIHRALFGSIERFFGILTEHYAGAF 579

Query: 547 PLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPII 606
           P WL+P+Q +   +    V Y +E+A  LKS+ + +E D  ++ +  KI  H+ +K+P +
Sbjct: 580 PAWLAPVQVVGIPVADEHVPYLEEVAAQLKSYGVRVEVDGSDDRMAKKIVHHTNQKVPFM 639

Query: 607 IICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL-----TKESLPP 648
           ++ GD++    ++  R    T    V    A+  +     T+E+  P
Sbjct: 640 LLAGDRDVQAGAVSFRFGDRTQLNGVPRDAAVAAIVEWLATRENTAP 686


>gi|84998192|ref|XP_953817.1| threonyl-tRNA synthetase [Theileria annulata]
 gi|65304814|emb|CAI73139.1| threonyl-tRNA synthetase, putative [Theileria annulata]
          Length = 743

 Score =  548 bits (1413), Expect = e-154,   Method: Composition-based stats.
 Identities = 233/703 (33%), Positives = 364/703 (51%), Gaps = 77/703 (10%)

Query: 4   DIKLTF--PDGSI----KNFPVHATGSDVAESISRSLAKKAVAVAI-------------- 43
           DI L     DG +    K+F    T  +V  S+ +  AKKAV   +              
Sbjct: 57  DISLVLVTDDGEVSVSGKSF--LTTPYNVLYSLDKKRAKKAVVAKVLYENRPSEVFADVD 114

Query: 44  -NG--------KVCDLSDPVRE-GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQ 93
            +          + D+  P  +   +E +     +   V  HS AHI+  A+++ +    
Sbjct: 115 EDNSDKSASEWVLWDMHRPFEDSCKVEFLDFNSEQGQHVYWHSSAHILGSALETCFGG-F 173

Query: 94  VAIGPIIEDGFYYDFD-KEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFES 152
           + IGP +  GFYYD          +++  +   ++ +   +SPF +   + E+A EL + 
Sbjct: 174 LTIGPALSSGFYYDVYLGNNSVKPEDVKPLLSHVEALTNLNSPFERLVCTKEEALELMKY 233

Query: 153 KKEAYKVEILES-IPAKENVTLYRQGEWFDLCRGPHVRSTGQVK-KFFKLMKVAGAYWRG 210
               +KV+++++ +P  EN   YR G++ DLCRGPH+ +T  V+   F + K++ +YW  
Sbjct: 234 --NPFKVQLIKNKVPDGENTVCYRCGDFVDLCRGPHIPTTSMVRANSFDVTKISSSYWLS 291

Query: 211 DSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSG-VIFWH 269
           ++    L R+YG ++  +++L  Y   +EE+++RDHR +  ++ LF+     S    FW 
Sbjct: 292 NAKSDTLQRVYGISFPEKEQLKMYKNRIEEAKQRDHRTIGTDLKLFYFDTVHSPGSCFWL 351

Query: 270 RKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTI 328
             G KI+  L+ +MR   +   Y+E+ TP +    LW+QSGH+D+Y+ NM+     D   
Sbjct: 352 PNGAKIYNRLVEFMRDNYRVRGYQEVITPNIFSCDLWKQSGHYDNYKENMYLFNLED--- 408

Query: 329 KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQ 388
                + +KPMNCPGH  +F H   SY++LP+RLA+FG ++RNE +GSL GL RVR F Q
Sbjct: 409 ---TEWGMKPMNCPGHCLMFKHLFLSYKQLPLRLADFGVLHRNELTGSLSGLTRVRRFQQ 465

Query: 389 DDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIM 448
           DDAH+FCT+EQ+ +E L I   I  +Y  F F     KLST+P K +G D LW+ AE  +
Sbjct: 466 DDAHIFCTREQIMDEVLNILTFIGKVYSLFDFRY-EFKLSTKPAKALGEDELWEIAEKSL 524

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
           +  L+             +  G+GAFYGPK + +L D + R+ QCGTIQ+DFNLP RFN 
Sbjct: 525 EEALNKTGTKW------TMNPGDGAFYGPKIDVVLFDCLDREHQCGTIQLDFNLPIRFNL 578

Query: 509 FYVNSHSEKC--------HPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTI 560
            Y +               PV+IHRA+FGSIERF+ I++E  KG LP WLSP Q +   I
Sbjct: 579 EYRDKSESSAENVRCGFNRPVIIHRAIFGSIERFVAIVLEQTKGKLPFWLSPNQLLFIPI 638

Query: 561 TSSAVEYAQEIANLLKS----------------HHLSIETDFRNETINYKIREHSIKKIP 604
           T + ++YA E+     +                   +++ D  N TIN KI+    ++  
Sbjct: 639 TDNHLDYALELYEKFNALGSNTNYIILIMIINGLGYNVDVDKSNNTINKKIKFGQQQRWN 698

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLP 647
            + I GD+E   R++ +R   S     +SL D + +   + L 
Sbjct: 699 YMGIVGDREVETRTVSLRPRDSDEQNVISLDDLVKLFESQQLK 741


>gi|121708695|ref|XP_001272218.1| threonyl-tRNA synthetase, putative [Aspergillus clavatus NRRL 1]
 gi|119400366|gb|EAW10792.1| threonyl-tRNA synthetase, putative [Aspergillus clavatus NRRL 1]
          Length = 743

 Score =  548 bits (1413), Expect = e-154,   Method: Composition-based stats.
 Identities = 222/674 (32%), Positives = 358/674 (53%), Gaps = 51/674 (7%)

Query: 4   DIKLTFP--DGSIKNFP---VHATGSDVAESISRSLAKKAVAVAING-KVCDLSDPVR-E 56
           +I +T    +GS    P      T       + + ++   V   I+G ++ DL+ P+  +
Sbjct: 74  EINVTLDLGNGSPSPVPAKAWETTPGSFLRDVPKDISANVVLAKIDGKELWDLNRPLERD 133

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK--EQPF 114
            S+  +  +      V  HS AH + EA +  +    ++ GP    GF+YD      +  
Sbjct: 134 CSVSFVPFDSLEGREVFWHSSAHCLGEACECEY-GCLLSHGPPTPQGFFYDMAMPENRVV 192

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
              +   ++ +   I      F +  ++ E  +++F   K  YK+  ++ +   E  T+Y
Sbjct: 193 KESDWPALDSRASRIFKEKQSFDRLEVTKENLKKMFAYSK--YKLHYIDKLVTGEKSTVY 250

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
           R G   DLCRGPH+++TG++K F K+M+ + AY+ GD +   L RI G A+  +++++++
Sbjct: 251 RCGSLVDLCRGPHIQNTGKIKTF-KIMQNSSAYFLGDQSNDSLQRIRGVAFPDKKQMSEH 309

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEE 293
           L FLEE+EKR+H ++ ++ +LF   E   G  F    G KIF  L + +R + +   Y+E
Sbjct: 310 LKFLEEAEKRNHLRIGKDQELFFFDEVSPGCPFLLPNGTKIFNALQALLRSEYRKRGYQE 369

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           + TP + D  +W+ SGHW  Y+ +MF +        + R +ALKPMNCPGH  +F H  +
Sbjct: 370 VQTPNMYDVGVWKTSGHWAHYKDDMFKLDV------EKREWALKPMNCPGHFVLFGHRER 423

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYRELP+R+A+FG ++RNE SG+L GL RVR F QDD H+FCT++Q+ +E   + + + S
Sbjct: 424 SYRELPLRIADFGVLHRNEASGALSGLTRVRKFQQDDTHIFCTQDQISSEIEGLFDFLQS 483

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           IY  FGF   + KLSTRPEK +G    W+ AE  +K  +   K +     +  +  G+GA
Sbjct: 484 IYGLFGFTFKL-KLSTRPEKYLGDLDTWNYAEEQLKSAMTKFKGA-----DWTIDEGDGA 537

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN------------SHSE----- 516
           FYGPK +  + DA+ R++QC TIQ+D+  P  F   Y+                E     
Sbjct: 538 FYGPKIDITIADALKREFQCATIQLDYQAPINFKLEYMTNEKGQAVMEESKKEGETKSNE 597

Query: 517 ----KCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIA 572
               +  PV+IHRA+ GS ERF+GI+IE+F G  P W+SP Q ++  +  +  +Y +E+ 
Sbjct: 598 PGPGRARPVVIHRAIIGSFERFLGILIEHFGGKWPFWISPRQILIVPVMPAVNDYVEELQ 657

Query: 573 NLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK- 631
            +L+   L+++ D    T+  KIR   + +   I + G +E   RS+ IR      TQ  
Sbjct: 658 QILRGDKLNVDIDISGNTMQKKIRTGQLAQYNFIFVVGAQEKESRSVNIRNRDDPATQNK 717

Query: 632 ---VSLLDAIPILT 642
              V L +A   L 
Sbjct: 718 GVMVPLEEAREKLR 731


>gi|226366266|ref|YP_002784049.1| threonyl-tRNA synthetase [Rhodococcus opacus B4]
 gi|254783533|sp|C1B4B5|SYT_RHOOB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|226244756|dbj|BAH55104.1| threonyl-tRNA synthetase [Rhodococcus opacus B4]
          Length = 685

 Score =  548 bits (1412), Expect = e-154,   Method: Composition-based stats.
 Identities = 247/659 (37%), Positives = 375/659 (56%), Gaps = 41/659 (6%)

Query: 17  FPVHAT-GSDVAESISRSLAKKAVAVAIN--GKVCDLSD-PVREGSIEIITPEDPRSLAV 72
            P   T G+ V E+   S     V V  +  G + DLS  P  +  +E +        +V
Sbjct: 15  VPAGTTAGTAVREAGYPSKGPDVVVVVRDAEGGLRDLSWVPDADVDVEPVAANTDDGRSV 74

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIAR 132
           IRHS AH++A+AVQ  +PE ++ IGP I+DGFYYDF  E+PF+ ++LA +EK+M++I+  
Sbjct: 75  IRHSAAHVLAQAVQQEFPEAKLGIGPPIKDGFYYDFAVERPFTPEDLANLEKRMKKIVKG 134

Query: 133 DSPFLKQYL-SHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE------------- 178
              F ++ + S E+AR   E   E +K+E+++     ++  +   G              
Sbjct: 135 SQRFSRRVVDSLEEARA--ELANEPFKLELIDDKSGIDDPEIMEVGGNELTIYDNLDPRT 192

Query: 179 ----WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
               W DLCRGPH+ +T  +  F KL + + AYWRG+ +   L RIYGTAW + +   Q+
Sbjct: 193 GEKVWGDLCRGPHIPTTKHIPAF-KLTRSSAAYWRGNQDNADLQRIYGTAWESAEAQEQH 251

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYE 292
           L  L E+E+RDHRKL  E+DLF   ++ GSG+  +H +G  I   +  Y R R +++ YE
Sbjct: 252 LELLAEAERRDHRKLGSELDLFSFPDELGSGLPVFHPRGGIIRTEMEDYSRKRHVEEGYE 311

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD-------LRTFALKPMNCPGHV 345
            +NTP +   HL++ SGH D YR  MF     D+ + +        + + LKPMNCP H 
Sbjct: 312 FVNTPHITKGHLYEVSGHLDWYRDGMFPAMHIDEELNEDGTVRKPGQDYYLKPMNCPMHN 371

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +F    +SYRELP+RL EFGSVYR E SG +HGL RVRG TQDDAH++CT+EQM +E  
Sbjct: 372 LIFRSRGRSYRELPLRLFEFGSVYRYEKSGVVHGLTRVRGMTQDDAHIYCTREQMRDELA 431

Query: 406 KIHNLIISIYKDFGFEKIMVKLS-TRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
                ++ + KD+G +   ++LS   P+K VG DA+W++A   +  V ++        +N
Sbjct: 432 TTLQFVLGLLKDYGLDDFYLELSTKNPDKFVGDDAVWEEATATLAEVAESSG------LN 485

Query: 465 TGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIH 524
                G  AFYGPK    ++DA+GR WQ  TIQ+DFNLP RF+  Y  S   K  PVMIH
Sbjct: 486 LVPDPGGAAFYGPKISVQVQDALGRTWQMSTIQLDFNLPERFDLEYTASDGTKKRPVMIH 545

Query: 525 RAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIET 584
           RA+FGSIERF G++ E++ G  P WL+P+Q +   +  +  ++  ++   LK+  +  E 
Sbjct: 546 RALFGSIERFFGVLTEHYAGAFPAWLAPVQVVGIPVAETFADHLFDVVKRLKAAGVRAEV 605

Query: 585 DFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           D  ++ +  KI  ++ +K+P +++ G ++    ++  R    T    V + DA+ I+T 
Sbjct: 606 DASDDRMQKKIFNNTAQKVPFMLLAGARDVEAGAVSFRFRDGTQVNGVPVDDAVRIVTD 664


>gi|166365884|ref|YP_001658157.1| threonyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
 gi|166088257|dbj|BAG02965.1| threonyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
          Length = 599

 Score =  548 bits (1412), Expect = e-153,   Method: Composition-based stats.
 Identities = 240/595 (40%), Positives = 360/595 (60%), Gaps = 16/595 (2%)

Query: 55  REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPF 114
            +  I++    +   L  IRH+ +H+MA AVQ ++P+ QV IGP  E GFYYDFD  +PF
Sbjct: 3   NQAPIKLPKTSESDHLKRIRHTTSHVMAMAVQKLFPKAQVTIGPWTETGFYYDFDVPEPF 62

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
           +  +L  I+K+M +II +  P +++ +S E+A +  ++  E YK+EIL  I  +E +TLY
Sbjct: 63  TDKDLKDIKKEMVKIINKKLPVIREQVSREEAEKRIKAINEVYKLEILAGI--QEPITLY 120

Query: 175 RQGE-WFDLCRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELT 232
             G+ W+DLC GPH+ +T ++  K  +L  VAGAYWRGD N+  L RIYGTAW   Q+L 
Sbjct: 121 HLGDAWWDLCAGPHLDNTSELDPKAIELETVAGAYWRGDENKAQLQRIYGTAWENPQQLA 180

Query: 233 QYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDD 290
           +Y    EE+ KRDHRKL +E+ LF  ++  G G+  W  KG  I   L  +++  ++K  
Sbjct: 181 EYKRRKEEALKRDHRKLGKELGLFIFSDSVGPGLPLWTPKGTLIRSLLEDFLKKEQLKRG 240

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR-TFALKPMNCPGHVAVFN 349
           Y  + TP +    L++ SGHW  Y+ +MF +   D+        F LKPMNCP H+ ++ 
Sbjct: 241 YLPVVTPHIARVDLFKISGHWQKYKEDMFPMMADDEESAGKEIGFVLKPMNCPFHIQIYK 300

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
             L+SYRELP+RLAEFG+VYR E SG L GL RVRGFT DD+H+F T EQ+  E L + +
Sbjct: 301 SDLRSYRELPMRLAEFGTVYRYEQSGELGGLTRVRGFTVDDSHLFVTPEQLDKEFLSVVD 360

Query: 410 LIISIYKDFGFEKIMVKLSTRPEK---RVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           LI++++K    +    +LS R  +    +GSD  W+ A++ ++  + T+       ++  
Sbjct: 361 LILTVFKSLQLKNFKARLSFRDPESDKYIGSDEAWEKAQSAIRKAVQTLG------MDYF 414

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
              GE AFYGPK ++I +DA+ R+WQ GT+QVD+NLP RF   YV     +  PVMIHRA
Sbjct: 415 EAPGEAAFYGPKLDFIFQDALEREWQLGTVQVDYNLPERFELEYVAEDGNRKRPVMIHRA 474

Query: 527 VFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF 586
            FGS+ER IGI+IE + G+ PLWL+P+Q  +  ++ + ++YA+E+   ++   +  ETD 
Sbjct: 475 PFGSLERLIGILIEEYAGDFPLWLAPVQIRLLPVSDTQLDYAKEVTAKMQLLGIRAETDT 534

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
             E +   IR     KIP++ + G KE    S+ IR   +     +S+ + +  L
Sbjct: 535 SGERLGKMIRNAETAKIPVMAVVGAKEMESNSLSIRTRATGDLGVISVEEVVAKL 589


>gi|87303299|ref|ZP_01086092.1| Threonyl-tRNA synthetase, class IIa [Synechococcus sp. WH 5701]
 gi|87282194|gb|EAQ74155.1| Threonyl-tRNA synthetase, class IIa [Synechococcus sp. WH 5701]
          Length = 603

 Score =  548 bits (1412), Expect = e-153,   Method: Composition-based stats.
 Identities = 252/575 (43%), Positives = 351/575 (61%), Gaps = 18/575 (3%)

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T E P  L + RHS +H++A AVQ ++P  QV IGP  E+GFYYDFD  +PF+  +L  I
Sbjct: 15  TSESPELLRI-RHSMSHVLAMAVQKLFPSSQVTIGPWTENGFYYDFDNPEPFTEADLKAI 73

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE-WFD 181
           +K+M +IIAR  P  +  +S E+A    +++ E YK+EIL  I  +E +TLY  G+ W+D
Sbjct: 74  KKEMGKIIARKLPLQRLEVSREQAEARIKAQNEPYKLEILAGI--QEPITLYTLGDEWWD 131

Query: 182 LCRGPHVRSTGQVKK-FFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           LC GPHV +T ++    F+L  VAGAYWRGD  R  L RIYGTAW T ++L +Y +  +E
Sbjct: 132 LCAGPHVANTSELNPKAFELESVAGAYWRGDETRAQLQRIYGTAWQTPEQLAEYKHRKQE 191

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           + +RDHR+L  ++ LF I ++   G++FWH +G ++   +  + R+      Y+ + TP 
Sbjct: 192 ALRRDHRRLGTDLQLFSIEDEAGAGLVFWHPRGARMRLLIEDFWRQAHFAAGYDLLYTPH 251

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V D  LW+ SGH D Y  +MF     D+     R + LKPMNCP HV  +   L+SYREL
Sbjct: 252 VADLSLWKTSGHLDFYSESMFGPMQVDE-----RQYQLKPMNCPFHVLTYASTLRSYREL 306

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R AE G+VYR E  G +HGLMRVRGFTQDDAH+FC  EQ+ +E L + NL  +I   F
Sbjct: 307 PIRWAELGTVYRYERPGVMHGLMRVRGFTQDDAHIFCLPEQIGDEILGVLNLTETILSSF 366

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
            F    V LSTRPEK +G DA+WD A   +   LD      +      +  G GAFYGPK
Sbjct: 367 DFHTYEVNLSTRPEKSIGDDAVWDLATTGLIEALD------RKGWPYKIDEGGGAFYGPK 420

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +  ++DAIGR WQC TIQ+DFNLP RF+  YV +   +  P+MIHRA+FGS+ERF GIM
Sbjct: 421 IDIKIEDAIGRMWQCSTIQLDFNLPERFDLHYVAADGSRQRPIMIHRAIFGSLERFFGIM 480

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           +EN+ G+ P WL+P Q  +  +T   + YA+E+   L+S  +    D   + +   IR  
Sbjct: 481 VENYAGDFPFWLAPEQVRLLPVTDEVIPYAEEVLGQLRSAGVRAAIDRSGDRLGKLIRHG 540

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
             +KIP++ + G KEA + S+ +R         V 
Sbjct: 541 EQQKIPVLAVIGAKEAEQGSVSLRSRRDGDLGSVE 575


>gi|75908999|ref|YP_323295.1| threonyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
 gi|75702724|gb|ABA22400.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Anabaena
           variabilis ATCC 29413]
          Length = 615

 Score =  548 bits (1412), Expect = e-153,   Method: Composition-based stats.
 Identities = 240/601 (39%), Positives = 362/601 (60%), Gaps = 15/601 (2%)

Query: 51  SDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK 110
           + P +   I +    +  +L  IRH+ +H+MA AVQ ++P+ QV IGP IE+GFYYDFD 
Sbjct: 14  NQPEQPEKIYLPRTSESETLKKIRHTASHVMAMAVQKLFPKAQVTIGPWIENGFYYDFDS 73

Query: 111 EQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN 170
            +PF+  +L  I+K+M +II R  P +++ +S E+A    +  KE YK+EIL  I + E 
Sbjct: 74  PEPFTDKDLKAIQKEMVKIINRKLPVVREEVSREEAERRIQEIKEPYKLEILADIKS-EP 132

Query: 171 VTLYRQG-EWFDLCRGPHVRSTGQVKK-FFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQ 228
           +T+Y  G EW+DLC GPHV +T  +     +L  VAGAYWRGD  +  L RIY TAW + 
Sbjct: 133 ITIYHLGNEWWDLCAGPHVENTKDLNPKAIELESVAGAYWRGDETKAQLQRIYATAWESP 192

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYMR-RK 286
           ++L +Y    EE+ +RDHRKL +E+ LF  + + G G+  W  KG  +  TL  +++  +
Sbjct: 193 EQLAEYKRRKEEALRRDHRKLGKELGLFIFSEQVGPGLPLWTPKGTLLRSTLEQFLQQEQ 252

Query: 287 IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL-RTFALKPMNCPGHV 345
           +K  Y  + TP +    L++ SGHW  Y+ +MF +   D+    + + F LKPMNCP H+
Sbjct: 253 LKRGYLPVVTPHIARVDLFKTSGHWQKYKEDMFPLMAEDEAAAAIEQGFVLKPMNCPFHI 312

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            ++   L+SYRELP+RLAEFG+VYR E SG L GL RVRGFT DD+H+F T EQ+ +E L
Sbjct: 313 QIYKSELRSYRELPMRLAEFGTVYRYEQSGELGGLTRVRGFTVDDSHLFVTPEQLDSEFL 372

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPE---KRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
            + +LI+S++K    +    +LS R     K +GSD +W+ AE  ++  ++ +     + 
Sbjct: 373 NVVDLILSVFKSLQLKNFKARLSFRDPASDKYIGSDEVWNKAEGAIRRAVEQLGMEHFEG 432

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
           I      GE AFYGPK ++I  DA+ R+WQ GT+QVD+NLP RF+  YV     +  PVM
Sbjct: 433 I------GEAAFYGPKLDFIFSDALEREWQLGTVQVDYNLPERFDLEYVAEDGTRKRPVM 486

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSI 582
           IHRA FGS+ER IGI+IE + G+ PLWL+P+QA +  +  + +++ +++   L+S  +  
Sbjct: 487 IHRAPFGSLERLIGILIEEYAGDFPLWLAPVQARLLPVGEAQLDFTKDVVAKLRSLGIRA 546

Query: 583 ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           E D   + +   IR     KIP++ + G KE    S+ IR   S     + + + +  + 
Sbjct: 547 EVDTSGDRLGKLIRNAEKDKIPVMGVVGAKEVETNSLSIRTRASGELGAIPVDEVVQKMK 606

Query: 643 K 643
            
Sbjct: 607 D 607


>gi|126658692|ref|ZP_01729837.1| Threonyl-tRNA synthetase, class IIa [Cyanothece sp. CCY0110]
 gi|126619954|gb|EAZ90678.1| Threonyl-tRNA synthetase, class IIa [Cyanothece sp. CCY0110]
          Length = 642

 Score =  548 bits (1412), Expect = e-153,   Method: Composition-based stats.
 Identities = 265/622 (42%), Positives = 361/622 (58%), Gaps = 54/622 (8%)

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            +   +P  L  IRH+CAH+MA AVQ ++PE +V IGP    GFYYDFD+ +PF+ ++L 
Sbjct: 27  PLQIANPEQLERIRHTCAHVMAMAVQILFPETKVTIGPTTNTGFYYDFDRPEPFAPEDLK 86

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE-- 178
           +I K+M+ II  + P +++ ++ E+ +   E   E YK+EIL+SIPA E +T Y  G   
Sbjct: 87  KITKQMRFIIKANLPIIREEITREEIKAEIEQLGEPYKLEILDSIPAGETITRYYIGSPD 146

Query: 179 -------------------------------WFDLCRGPHVRSTGQVKK-FFKLMKVAGA 206
                                          W+DLC GPH+  TG++    F L  VAGA
Sbjct: 147 GGRLPNVGEKLKGALPEPSLIKPVKIPATVSWWDLCAGPHINYTGEINPNAFALESVAGA 206

Query: 207 YWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAE-DGSGV 265
           YWRGD  +  L RIYGTAW T ++L  YL   EE+++RDHRKL +E+ LF I E  G G+
Sbjct: 207 YWRGDETKAQLQRIYGTAWETPEQLDAYLKQQEEAKRRDHRKLGKELKLFSIQEGAGGGL 266

Query: 266 IFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCA 324
           +FWH +G  +   +  Y R+  +   YE + TP V +  LW+ SGH+D YR NMF     
Sbjct: 267 VFWHPRGATMRYIIEDYWRKAHLDGGYELLYTPHVANLELWKTSGHFDFYRENMFDSMDI 326

Query: 325 DDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVR 384
                + + + +KPMNCP HV  + + L SYRE P+R AE G+VYR E SG LHGLMRVR
Sbjct: 327 -----EEQAYQIKPMNCPFHVLTYKNDLHSYREFPLRWAELGTVYRYERSGVLHGLMRVR 381

Query: 385 GFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
           GFTQDDAH+FC   Q+  E L + NL   I  DFGF+   V LSTRPEK VG+D  W+ A
Sbjct: 382 GFTQDDAHIFCLPTQIAAEILGVLNLTEKILSDFGFKDYEVNLSTRPEKSVGTDEGWELA 441

Query: 445 ENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPS 504
              +   L++               G GAFYGPK +  +KDAIGR WQC TIQVDFNLP 
Sbjct: 442 TQALVEALNS------KSWEYIEDKGGGAFYGPKIDIKIKDAIGRTWQCSTIQVDFNLPE 495

Query: 505 RFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA 564
           RF+  YV +   +  P+MIHRA+FGS+ERF GI+IEN+ G+ PLWL+PIQ  +  ++ + 
Sbjct: 496 RFDMEYVAADGSRQRPIMIHRAIFGSLERFYGILIENYAGDFPLWLAPIQLRLLPVSEAQ 555

Query: 565 VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRF 624
            EY + +   LK     +E D   E +  +IR+  ++KIP++ I G+KE   +S+ IR  
Sbjct: 556 REYGETVVATLKEAGYRVEIDCTGERLGKQIRKAELEKIPVVAIVGNKEVETQSLSIRTR 615

Query: 625 GSTTTQKV-------SLLDAIP 639
                  +       SL DAI 
Sbjct: 616 QQGDIGTMDLTELKKSLDDAIA 637


>gi|326329871|ref|ZP_08196188.1| threonine--tRNA ligase [Nocardioidaceae bacterium Broad-1]
 gi|325952338|gb|EGD44361.1| threonine--tRNA ligase [Nocardioidaceae bacterium Broad-1]
          Length = 659

 Score =  547 bits (1410), Expect = e-153,   Method: Composition-based stats.
 Identities = 244/667 (36%), Positives = 373/667 (55%), Gaps = 45/667 (6%)

Query: 3   SDIKLTF--PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
           S+IK+    PDG  +      TG+   E  + +     +A  +   + DLS  + +G  +
Sbjct: 2   SEIKIAVLTPDG--REERTVTTGTKAWELFADN--PDVIAARVGEDLKDLSYELADGDEV 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           E +  +      ++RHS AH+MA+AVQ ++PE ++ IGP + DGFYYDFD E PF  ++L
Sbjct: 58  EGVLIDSKDGHDILRHSTAHVMAQAVQELFPEAKLGIGPPVTDGFYYDFDVETPFVPEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-------------ESIP 166
            +IE +M++II  +  F ++  S E AR   E   E YK+E++             ++  
Sbjct: 118 VKIESRMKKIIKANQKFSRRVTSDEDAR--VELADEPYKLELIGLKGSAADAAEGADAEV 175

Query: 167 AKENVTLY----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRI 220
               +T+Y    R GE  W DLCRGPH+ +T ++  F KLM+ A AYWRGD     L RI
Sbjct: 176 GGGELTIYDNLDRNGEIAWKDLCRGPHLPTTKRIPAF-KLMRSAAAYWRGDEKNKQLQRI 234

Query: 221 YGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTL 279
           YGTAW +++ L  +L  +EE+E+RDHRKL RE+DL+   ++ GSG+  +H KG  I + +
Sbjct: 235 YGTAWESKEALDAHLARIEEAERRDHRKLGRELDLYSFPDELGSGLPVFHPKGGVIKREM 294

Query: 280 ISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKP 338
             Y+RR  I++ +  + TP +    L+  SGH   Y   MF          +   + LK 
Sbjct: 295 EDYVRRRHIEEGFSYVGTPHISKDGLFHTSGHLPYYADTMFPPMEL-----EGAKYQLKA 349

Query: 339 MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE 398
           M+CP H  ++    +SYRELP+RL EFG+VYR E SG +HGL RVRG TQDD+H + TKE
Sbjct: 350 MSCPMHNLIYKAKGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRVRGLTQDDSHSYVTKE 409

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLSTR---PEKRVGSDALWDDAENIMKGVLDTI 455
           Q   E   + + ++ + KDFG +   ++LSTR     K +GSD  W+ A  I++ V    
Sbjct: 410 QAPAEIKHLLDFVLGVLKDFGLDDFYLELSTRDADNAKFIGSDEQWETATKILEDV---- 465

Query: 456 KNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS 515
             +++  +      G  AFYGPK     +DAIGR WQ  TIQ DFN P+RF   Y  +  
Sbjct: 466 --ATESGLELVADPGGAAFYGPKISVQARDAIGRTWQMSTIQYDFNQPARFGLEYQAADG 523

Query: 516 EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLL 575
            +  PVMIH A FGSIERF+G+++E++ G +P WL+P+Q +   +  +  +Y  E+A  L
Sbjct: 524 TRQEPVMIHSAKFGSIERFLGVLVEHYAGAMPPWLAPVQVVGIPVADAFADYLYEVAGKL 583

Query: 576 KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
           K+  + +E D  ++    KIR   ++KIP ++I G ++  + ++  R         + + 
Sbjct: 584 KAKGIRVEVDESDDRFQKKIRNAQLQKIPFMLIAGGEDVEKGAVSFRYRDGRQENGIPVD 643

Query: 636 DAIPILT 642
           +AI  + 
Sbjct: 644 EAIERIV 650


>gi|229817631|ref|ZP_04447913.1| hypothetical protein BIFANG_02901 [Bifidobacterium angulatum DSM
           20098]
 gi|229785420|gb|EEP21534.1| hypothetical protein BIFANG_02901 [Bifidobacterium angulatum DSM
           20098]
          Length = 677

 Score =  547 bits (1410), Expect = e-153,   Method: Composition-based stats.
 Identities = 246/669 (36%), Positives = 366/669 (54%), Gaps = 43/669 (6%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           S I +T  +G  K      TG ++         K  +AV +NG+  DL  P+ +G ++E 
Sbjct: 4   SSISITV-NGEAKEVEATTTGVELFSD-----DKNIIAVRLNGEPRDLYTPLSDGDTVEG 57

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           I  +    +A++RHS  H+MA+AVQ I+P  ++ +GP+I+DGFYYDFD EQPF+ ++L  
Sbjct: 58  IALDSEDGIAIMRHSATHVMAQAVQEIYPNAKLGVGPVIKDGFYYDFDVEQPFTPEDLKN 117

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPA-----------KEN 170
           IEK+MQ II     F ++ ++ E    L E   + YK+E+++   A           ++ 
Sbjct: 118 IEKRMQRIIKSSQSFRRRVVTEE--EALAEEADQPYKIELIKDKEAHLDPAAATEVSEKE 175

Query: 171 VTLYRQGE------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTA 224
           ++ Y   +      W DLCRGPH+ +T  +K F K+ + A AYWRG    PML RIYG A
Sbjct: 176 LSFYDNVDRDGNVVWKDLCRGPHLPNTRYIKAF-KIERSAAAYWRGSEANPMLQRIYGAA 234

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM 283
           + T+++L  Y   LEE+ KRDHRKL  EMDLF   ++ G G+  +H KG  +   +  Y 
Sbjct: 235 FATKEDLKAYQTRLEEAAKRDHRKLGAEMDLFSFPDEIGPGLAVFHPKGAAVINAMEDYS 294

Query: 284 RR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT-------IKDLRTFA 335
           R    K  Y  + TP +    L++ SGH   Y+ +M+     D+         K    + 
Sbjct: 295 REMHRKHHYSFVQTPHITKGGLYETSGHLHWYKDSMYPPMRLDEEKDENGNVTKQGFDYY 354

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC 395
           LKPMNCP H  +F    +SYRELP+RL EFG+VYR E SG +HGL RVRG TQDD+H++C
Sbjct: 355 LKPMNCPMHNLIFKSRQRSYRELPLRLFEFGTVYRYEKSGEVHGLTRVRGLTQDDSHIYC 414

Query: 396 TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDT 454
           T+EQM +E   +   ++ + KDFG +   ++LST+     VGSD +W++A N +  V   
Sbjct: 415 TREQMKDELKNLLTFVLGLLKDFGLDDFYLELSTKDPHKYVGSDEIWEEATNTLAEVAKD 474

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH 514
                   +         AFYGPK     +DAIGR WQ  TIQ+DFNLP RF   Y+ + 
Sbjct: 475 SG------LELVDDPCGAAFYGPKISVQARDAIGRTWQVSTIQLDFNLPERFQLEYIAAD 528

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANL 574
                PVMIHRA+FGSIERF  +++E++ G  P WL+P+Q +   +      + Q+    
Sbjct: 529 GTHQRPVMIHRALFGSIERFFAVLLEHYAGAFPAWLAPVQVLGVPVADEFAPHLQKFIAS 588

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           L+   +  E D  ++    KIR  S  K P I+I G+++ +  ++  R    +    V +
Sbjct: 589 LEEETVRCEIDLSDDRFGKKIRNASKSKAPFILIVGEEDMNNNAVSFRFRDGSQLNGVPV 648

Query: 635 LDAIPILTK 643
            +A   + K
Sbjct: 649 DEAKANIMK 657


>gi|283456070|ref|YP_003360634.1| ThrS Threonyl-tRNA synthetase [Bifidobacterium dentium Bd1]
 gi|283102704|gb|ADB09810.1| ThrS Threonyl-tRNA synthetase [Bifidobacterium dentium Bd1]
          Length = 677

 Score =  547 bits (1410), Expect = e-153,   Method: Composition-based stats.
 Identities = 243/666 (36%), Positives = 363/666 (54%), Gaps = 44/666 (6%)

Query: 1   MPSD-IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI 59
           M    I +T  +G  K      TG  +         K  +AV +NG+  DL   + +G +
Sbjct: 1   MAEQTISITL-NGESKEVAADQTGVQLFAD-----DKNIIAVRLNGEPRDLYTELHDGDV 54

Query: 60  -EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
            E I  +    +A++RHS  H+MA+AVQ I P+ ++ +GP+I+DGFYYDFD  +PF+ ++
Sbjct: 55  VEPIALDSEDGVAIMRHSATHVMAQAVQEIRPDAKLGVGPVIKDGFYYDFDVVEPFTPED 114

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPA----------- 167
           L  IEK+MQ II     F ++ +S ++A    E   + YK+E+++   A           
Sbjct: 115 LKDIEKRMQRIIKSSQSFRRRVVSEQEALA--EEADQPYKLELIKDKEAHLDPEAATEIS 172

Query: 168 KENVTLYRQGE------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIY 221
           ++ ++ Y   +      W DLCRGPH+ +T  +K F K+ + A AYWRG+   PML RIY
Sbjct: 173 EKELSFYDNIDRDGNVVWKDLCRGPHLPNTRYIKAF-KIERSAAAYWRGNEANPMLQRIY 231

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLI 280
           G A+ T+++L  Y   LEE+ KRDHRKL  EMDLF   ++ G G+  +H KG  +   + 
Sbjct: 232 GAAFATKEDLKAYQTRLEEAAKRDHRKLGAEMDLFSFPDEIGPGLAVFHPKGAAVINAME 291

Query: 281 SYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT-------IKDLR 332
            Y R    K  Y  + TP +    L++ SGH   Y+  M+     D+        IK   
Sbjct: 292 DYSREMHRKHHYSFVQTPHITKGGLYETSGHLHWYKDGMYPAMRLDEEKDENGNIIKQGF 351

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
            + LKPMNCP H  +F    +SYRELP+RL EFG+VYR E SG +HGL RVRG TQDD+H
Sbjct: 352 DYYLKPMNCPMHNLIFKSRQRSYRELPLRLFEFGTVYRYEKSGEVHGLTRVRGLTQDDSH 411

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGV 451
           ++CT+EQM +E   +   ++ + KDFG +   ++LST+     VGSD +W++A N +  V
Sbjct: 412 IYCTREQMKDELKNLLTFVLGLLKDFGLDDFYLELSTKDPHKYVGSDEIWEEATNTLAEV 471

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
                   +  +         AFYGPK     +DAIGR WQ  TIQ+DFNLP RF   Y+
Sbjct: 472 AK------ESGLELVDDPCGAAFYGPKISVQARDAIGRTWQVSTIQLDFNLPERFKLEYI 525

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
            +      PVMIHRA+FGSIERF  +++E++ G  P WL+P+Q +   +      + Q  
Sbjct: 526 AADGTHQRPVMIHRALFGSIERFFAVLLEHYAGAFPAWLAPVQVLGVPVADEFAPHLQRF 585

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
              L+   +  E D  ++    KIR  S  K+P I+I G+++ +  ++  R    +    
Sbjct: 586 IASLEEETVRCEIDMSDDRFGKKIRNASKSKVPFILIVGEEDMNNNAVSFRFRDGSQLNG 645

Query: 632 VSLLDA 637
           V + +A
Sbjct: 646 VPVDEA 651


>gi|323342132|ref|ZP_08082365.1| threonine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
 gi|322464557|gb|EFY09750.1| threonine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
          Length = 596

 Score =  547 bits (1410), Expect = e-153,   Method: Composition-based stats.
 Identities = 239/590 (40%), Positives = 372/590 (63%), Gaps = 18/590 (3%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSS 116
            + ++   +   L ++ HS AH++A AV+ ++PE +  +GP+IEDGFYYD D  +Q  + 
Sbjct: 11  EVIMVNIREDERLNILNHSSAHLLAHAVKRLYPEAKFWVGPVIEDGFYYDMDLGDQVLTE 70

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
           ++L +IE  M++I   D    ++ L+ E+A E+F+   ++YK++I+ ++     ++ YRQ
Sbjct: 71  EDLPKIESMMRKIAKEDKRITREELTKEEALEIFK--DDSYKIDIINNLEDDATISAYRQ 128

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
            E+ DLCRGPHV +T ++K F KL+KV+GAYW+GDSN  ML R+YG  + T+++L QYL 
Sbjct: 129 AEFIDLCRGPHVETTKKMKYF-KLLKVSGAYWKGDSNNKMLQRVYGITFETEEDLNQYLE 187

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTL-ISYMRRKIKDDYEEIN 295
           +LE ++ RDH+KL +E++LF ++E G G  FW   G  +   L   Y    IK  Y    
Sbjct: 188 WLEAAKARDHKKLGKELELFMMSEFGPGFPFWLPNGMTLRHALDEYYYNAHIKRGYVFTQ 247

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP +L++ LW+ SGHW++YR NM+       +  D R FA+KPMNCPG + V+ +GL SY
Sbjct: 248 TPTMLNKELWEVSGHWENYRENMYT------STIDDREFAIKPMNCPGGMLVYKNGLHSY 301

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           R+LP+RLAE G V+R+E SG+L+GL RVR FTQDDAH+F  ++Q+ +E ++I + I  IY
Sbjct: 302 RDLPIRLAEMGHVHRHEASGALNGLFRVRSFTQDDAHLFMREDQLQDEIVEILDFINEIY 361

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
             FG    +   +   +K +G   +WD +E  +K             ++  +  G+GAFY
Sbjct: 362 STFGLSYSIELSTRPEDKYIGDIDVWDRSEQALKEA------CMAAGVDFKINEGDGAFY 415

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++ ++D++ R WQCGT+Q+D NLP RF+  YV    +K  P+M+HRA+FGSIERFI
Sbjct: 416 GPKLDFKVRDSLNRVWQCGTVQLDMNLPERFDLTYVAEDGKKKRPIMLHRAIFGSIERFI 475

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYK 594
           GI+IE+F G  PLW++P Q  +  + +   ++YA E+ +LL    +    D RNE + Y+
Sbjct: 476 GILIEHFAGGFPLWMAPKQIEIIPVNTEFHMDYANEVCDLLLEKGIRAHVDGRNEKLGYR 535

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +RE    KIP+ +I GD+E  +RS+ +RR+G        L   + ++  E
Sbjct: 536 LREAQKNKIPLQLIIGDQEIEDRSVNVRRYGERAQNPFDLDVFMQMVENE 585


>gi|258653602|ref|YP_003202758.1| threonyl-tRNA synthetase [Nakamurella multipartita DSM 44233]
 gi|258556827|gb|ACV79769.1| threonyl-tRNA synthetase [Nakamurella multipartita DSM 44233]
          Length = 699

 Score =  547 bits (1410), Expect = e-153,   Method: Composition-based stats.
 Identities = 246/666 (36%), Positives = 361/666 (54%), Gaps = 44/666 (6%)

Query: 13  SIKNFPVHATGSDV--AESISRSLAKKAVAVA-INGKVCDLSD-PVREGSIEIITPEDPR 68
           S++  P   T      A  +  S  +  V V   +G++ DLS  P  +  +E +  +   
Sbjct: 12  SVR-VPAGTTAGSAVRAAGLPSSGPQAVVVVRDADGRLRDLSWSPDGDVDVEPVGADTED 70

Query: 69  SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQE 128
             +VIRHS AH++A+AVQ  +P+ ++ IGP I+DGFYYDFD ++PF+ D+LA +EK+M++
Sbjct: 71  GRSVIRHSAAHVLAQAVQDKFPDAKLGIGPPIKDGFYYDFDVDRPFTPDDLADLEKRMRK 130

Query: 129 IIARDSPFLKQYLSHEKARELFESKKEAYKVEILE-------SIPAKENV-------TLY 174
           II     F ++ +         E   E YK+E+++          A E V       T+Y
Sbjct: 131 IIKSGQRFARRVVDSPA-AARAELAAEPYKLELIDLKSDAAVDGSADEAVEVGAGELTIY 189

Query: 175 -----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNT 227
                  G+  W DLCRGPHV +T  +  F  L   A AYWRG    P L RIYGTAW +
Sbjct: 190 DNLHAHTGDRVWGDLCRGPHVPTTRAIPAFQLLRS-AAAYWRGSEKNPQLQRIYGTAWES 248

Query: 228 QQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-R 285
            + L  Y  +  E+E+RDHRKL  E+DLF   ++ GSG+  +H KG  I + L  Y R +
Sbjct: 249 AEALEAYQQWHAEAERRDHRKLGVELDLFSFPDELGSGLPVFHPKGGIIRKELEDYSRAK 308

Query: 286 KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD-------DTIKDLRTFALKP 338
            I   Y  + TP +    L++ SGH D Y   MF     D       +  K  + + LKP
Sbjct: 309 HIAAGYSFVYTPHITKAKLYEISGHLDWYADGMFPAMHLDAELGPDGEVRKPGQDYYLKP 368

Query: 339 MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE 398
           MNCP H  +F    +SYRELP+R+ EFG+VYR E SG +HGL RVRG TQDDAH+FCT+E
Sbjct: 369 MNCPMHDLIFRSRGRSYRELPLRMFEFGAVYRYEKSGVIHGLTRVRGMTQDDAHIFCTRE 428

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDTIKN 457
           QM +E   +   ++ +  D+G +   ++LSTR E   VG+D  W  A   +  V      
Sbjct: 429 QMRDELTSLLRFVLELLADYGLDDYYLELSTRNEDKYVGTDENWAVATETLAEV------ 482

Query: 458 SSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK 517
           + +  ++     G  AFYGPK     +DA+GR WQ  TIQ+DFNLP RF   Y      K
Sbjct: 483 ARESGLDLVDDPGGAAFYGPKISVQARDALGRTWQMSTIQLDFNLPERFELEYTGPDGSK 542

Query: 518 CHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKS 577
             PVMIHRA+FGS+ERF G++ E++ G  P WLSP+Q +   +  +  +Y Q++ + L +
Sbjct: 543 QRPVMIHRALFGSVERFFGVLTEHYAGAFPAWLSPVQVVGIPVADAFGDYLQDVVDQLVA 602

Query: 578 HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
             +  E D  ++ +  KIR H+  K+P +++ G+K+ +  ++  R    T    V    A
Sbjct: 603 RGIRAEADHSDDRMQKKIRTHTTAKVPFLLLAGEKDVAAGAVSFRFRDGTQINGVPAAAA 662

Query: 638 IPILTK 643
           +  +  
Sbjct: 663 VQAIVD 668


>gi|170781142|ref|YP_001709474.1| threonyl-tRNA synthetase [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|169155710|emb|CAQ00831.1| threonine-tRNA synthetase [Clavibacter michiganensis subsp.
           sepedonicus]
          Length = 684

 Score =  547 bits (1409), Expect = e-153,   Method: Composition-based stats.
 Identities = 249/663 (37%), Positives = 370/663 (55%), Gaps = 46/663 (6%)

Query: 18  PVHATGSDV-AESISRSL----AKKAVAVAINGKVCDLSDPVREGSI-EIITPEDPRSLA 71
           P   TG  V A            +  VA+ I+G++ DL+  V  G + E +  + P  LA
Sbjct: 15  PAETTGQPVEATEAGTGFTLFSDRAVVAMRIDGELKDLAAEVAPGDVVEPVRIDSPDGLA 74

Query: 72  VIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIA 131
           ++RHS AH+MA+AVQ I PE ++ IGP + DGFY+DFD  +PF+ ++L  I K M+ I+ 
Sbjct: 75  ILRHSAAHVMAQAVQQINPEAKLGIGPPVTDGFYFDFDVAEPFTPEDLKAISKNMERIVR 134

Query: 132 RDSPFLKQYLSHEKARELFESKKEAYKVEIL-------ESIPAKEN--------VTLYRQ 176
           +   F ++ +S E+AREL  +  E YK+E++       + +             +T+Y  
Sbjct: 135 QGQRFTRRVVSEEEARELMAA--EPYKLELIGLKGGSSDELGEDGESVEVGGAELTVYEN 192

Query: 177 GE-------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQ 229
            +       W DLCRGPH+ ST  V   + L +VA AYWRG    P L RIYGTAW T+ 
Sbjct: 193 VDGKTGEVFWRDLCRGPHLPSTRMVGNGWALSRVAAAYWRGSEKNPQLQRIYGTAWPTKD 252

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KI 287
           EL  Y   +EE+ KRDHR+L  E+DLF   ++ GSG+  +H KG  I + +  Y RR   
Sbjct: 253 ELRAYQGRIEEALKRDHRRLGAELDLFSFPDEIGSGLAVFHPKGGIIRREMEDYSRRRHE 312

Query: 288 KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD-------LRTFALKPMN 340
              YE + +P +   +L++ SGH D Y+  MF     D+   D          + LKPMN
Sbjct: 313 TAGYEFVYSPHITKSNLFETSGHLDFYKDGMFPAMHLDEARNDEGEITRQGADYYLKPMN 372

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
           CP HV ++    +SYRELP+RL EFG+VYRNE SG +HGL RVRG TQDDAH+F T+E+M
Sbjct: 373 CPMHVLIYRSRQRSYRELPLRLFEFGTVYRNEKSGVIHGLTRVRGMTQDDAHIFTTRERM 432

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDTIKNSS 459
            +E       ++S+ +D+G +   ++LST+  +  VGSD +W++A   ++ V        
Sbjct: 433 ADELKGTLEFVLSLLRDYGLDDFYLELSTKDPEKFVGSDEVWEEATETLRQVAVDTG--- 489

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
              +         AFYGPK     +DAIGR WQ  TIQ+DFNLP RF   Y  +   +  
Sbjct: 490 ---LELVPDPAGAAFYGPKISVQARDAIGRTWQMSTIQLDFNLPERFGLEYTANDGTRKQ 546

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH 579
           PVMIHRA+FGSIERF G++ E++ G  P+WLSP+Q +   +     EY   + + L++  
Sbjct: 547 PVMIHRALFGSIERFFGVLTEHYAGAFPVWLSPVQVVGIPVAEDYEEYLGGVLDRLRAEG 606

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
           + ++ D  ++ +  KIR H+  ++P  +I G+ + +  S+  R    T    V + +A+ 
Sbjct: 607 VRVQLDTSDDRMPKKIRTHTKARVPYQLIAGEDDRAAGSVSFRFRDGTQVNGVPVAEAVE 666

Query: 640 ILT 642
            +T
Sbjct: 667 RIT 669


>gi|309800860|ref|ZP_07694992.1| threonine--tRNA ligase [Bifidobacterium dentium JCVIHMP022]
 gi|308222396|gb|EFO78676.1| threonine--tRNA ligase [Bifidobacterium dentium JCVIHMP022]
          Length = 677

 Score =  547 bits (1409), Expect = e-153,   Method: Composition-based stats.
 Identities = 243/666 (36%), Positives = 363/666 (54%), Gaps = 44/666 (6%)

Query: 1   MPSD-IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI 59
           M    I +T  +G  K      TG  +         K  +AV +NG+  DL   + +G +
Sbjct: 1   MAEQTISITL-NGESKEVAADQTGVQLFAD-----DKNIIAVRLNGEPRDLYTELHDGDV 54

Query: 60  -EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
            E I  +    +A++RHS  H+MA+AVQ I P+ ++ +GP+I+DGFYYDFD  +PF+ ++
Sbjct: 55  VEPIALDSEDGVAIMRHSATHVMAQAVQEIRPDAKLGVGPVIKDGFYYDFDVVEPFTPED 114

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPA----------- 167
           L  IEK+MQ II     F ++ +S ++A    E   + YK+E+++   A           
Sbjct: 115 LKDIEKRMQRIIKSSQSFRRRVVSEQEALA--EEADQPYKLELIKDKEAHLDPEAATEIS 172

Query: 168 KENVTLYRQGE------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIY 221
           ++ ++ Y   +      W DLCRGPH+ +T  +K F K+ + A AYWRG+   PML RIY
Sbjct: 173 EKELSFYDNVDRDGNVVWKDLCRGPHLPNTRYIKAF-KIERSAAAYWRGNEANPMLQRIY 231

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLI 280
           G A+ T+++L  Y   LEE+ KRDHRKL  EMDLF   ++ G G+  +H KG  +   + 
Sbjct: 232 GAAFATKEDLKAYQTRLEEAAKRDHRKLGAEMDLFSFPDEIGPGLAVFHPKGAAVINAME 291

Query: 281 SYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT-------IKDLR 332
            Y R    K  Y  + TP +    L++ SGH   Y+  M+     D+        IK   
Sbjct: 292 DYSREMHRKHHYSFVQTPHITKGGLYETSGHLHWYKDGMYPAMRLDEEKDENGNIIKQGF 351

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
            + LKPMNCP H  +F    +SYRELP+RL EFG+VYR E SG +HGL RVRG TQDD+H
Sbjct: 352 DYYLKPMNCPMHNLIFKSRQRSYRELPLRLFEFGTVYRYEKSGEVHGLTRVRGLTQDDSH 411

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGV 451
           ++CT+EQM +E   +   ++ + KDFG +   ++LST+     VGSD +W++A N +  V
Sbjct: 412 IYCTREQMKDELKNLLTFVLGLLKDFGLDDFYLELSTKDPHKYVGSDEIWEEATNTLAEV 471

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
                   +  +         AFYGPK     +DAIGR WQ  TIQ+DFNLP RF   Y+
Sbjct: 472 AK------ESGLELVDDPCGAAFYGPKISVQARDAIGRTWQVSTIQLDFNLPERFKLEYI 525

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
            +      PVMIHRA+FGSIERF  +++E++ G  P WL+P+Q +   +      + Q  
Sbjct: 526 AADGTHQRPVMIHRALFGSIERFFAVLLEHYAGAFPAWLAPVQVLGVPVADEFAPHLQRF 585

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
              L+   +  E D  ++    KIR  S  K+P I+I G+++ +  ++  R    +    
Sbjct: 586 IASLEEETVRCEIDMSDDRFGKKIRNASKSKVPFILIVGEEDMNNNAVSFRFRDGSQLNG 645

Query: 632 VSLLDA 637
           V + +A
Sbjct: 646 VPVDEA 651


>gi|116070824|ref|ZP_01468093.1| Threonyl-tRNA synthetase, class IIa [Synechococcus sp. BL107]
 gi|116066229|gb|EAU71986.1| Threonyl-tRNA synthetase, class IIa [Synechococcus sp. BL107]
          Length = 615

 Score =  547 bits (1409), Expect = e-153,   Method: Composition-based stats.
 Identities = 249/582 (42%), Positives = 355/582 (60%), Gaps = 18/582 (3%)

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T E  + L + RHS +H+MA AVQ ++P+ QV IGP  E GFYYDFD  +PF+ D+L  I
Sbjct: 28  TSESAQLLKI-RHSMSHVMAMAVQKLFPDAQVTIGPWTETGFYYDFDNPEPFTEDDLKAI 86

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE-WFD 181
           +K+M +II R  P  +  +S ++A +  +++ E YK+EILE +  +E +TLY  G+ W+D
Sbjct: 87  KKEMGKIIGRKLPLERIEVSRDEAEKRIKAQNEPYKLEILERL--QEPITLYTLGDQWWD 144

Query: 182 LCRGPHVRSTGQVKK-FFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           LC GPHV +T ++    F+L  VAGAYWRGD  +  L RIYGTAW T ++L ++     E
Sbjct: 145 LCAGPHVENTKELHPKAFELESVAGAYWRGDETKAQLQRIYGTAWETPEQLAEHKRRKAE 204

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           + +RDHR+L +++DLF I ++   G++FWH +G ++   +  + R+   +  YE + TP 
Sbjct: 205 ALRRDHRRLGKDLDLFSIEDEAGAGLVFWHPRGARMRLLIEDFWRQAHFEGGYELLYTPH 264

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V D  LW+ SGH D Y  +MF     D+     R + LKPMNCP HV  +   L+SYREL
Sbjct: 265 VADISLWKTSGHLDFYAESMFGPMQVDE-----REYQLKPMNCPFHVLTYASKLRSYREL 319

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R AE G+VYR E  G +HGLMRVRGFTQDDAHVFC  +Q+ +E L+I +L   I   F
Sbjct: 320 PIRWAELGTVYRYERPGVMHGLMRVRGFTQDDAHVFCLPDQISDEILRILDLTERILSTF 379

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
            F    + LSTRPEK +GS+A+WD A   +   L+      +   N  +  G GAFYGPK
Sbjct: 380 DFNNYEINLSTRPEKSIGSEAVWDLATKGLTEALE------RKGWNYKIDEGGGAFYGPK 433

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +  ++DAIGR WQC TIQ+DFNLP RF   YV +   K  P+MIHRA+FGS+ERF GIM
Sbjct: 434 IDLKIEDAIGRMWQCSTIQLDFNLPERFGLDYVAADGSKQQPIMIHRAIFGSLERFFGIM 493

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
            EN+ G+ P WL+P Q  +  +T     YA+++ + LK+  +    D   + +   IR  
Sbjct: 494 TENYAGDFPFWLAPEQIRLLPVTDDVQPYAEQLLDQLKTAGIRATIDQSGDRLGKIIRTG 553

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
              KIP++ + G KEA + ++ +R          S+   +  
Sbjct: 554 EQMKIPVLAVIGAKEAEQNAVSLRSRRDGDLGVTSVDALLNA 595


>gi|325068893|ref|ZP_08127566.1| threonine--tRNA ligase [Actinomyces oris K20]
          Length = 683

 Score =  547 bits (1409), Expect = e-153,   Method: Composition-based stats.
 Identities = 237/676 (35%), Positives = 350/676 (51%), Gaps = 45/676 (6%)

Query: 1   MPSD--IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS 58
           M     I++T  DG+ +     +TG  + +   +      VA+ +NG+  DL   V  G+
Sbjct: 1   MSDQLMIEITL-DGAPRTIEAGSTGVLLLQDAVK--KDGVVAMRVNGEPWDLERQVPAGA 57

Query: 59  I-EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSD 117
           + E IT      L ++RHS  H+MA+AVQ ++P+V + IGP I DGFYYDF      + +
Sbjct: 58  VVEPITLASEDGLNILRHSATHVMAQAVQEMFPDVNLGIGPFITDGFYYDFGAIDAVTPE 117

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK--------- 168
            L +IEK+M+ I+     F+++ ++ ++  E  E   + YK+E++ +  A          
Sbjct: 118 MLREIEKRMKRIVKEGQRFVRRDITEDQGSE--ELADQPYKLELITTKGAGAEGASVEVG 175

Query: 169 -------ENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIY 221
                  +NV       W DLCRGPH+ ST  + + F L K + AYW+GD +   L RIY
Sbjct: 176 AGGLTMYDNVRRDGTVAWTDLCRGPHLPSTRLIGQGFALTKSSSAYWKGDQSGDSLQRIY 235

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLI 280
           GTAW T+ +L  Y   L E+ KRDHRKL  E+DL+   E+ G G++ +H KG  +   + 
Sbjct: 236 GTAWATKDDLKAYQTRLAEAAKRDHRKLGAELDLYSFPEEIGPGLVVFHPKGAMLRHQIE 295

Query: 281 SYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT-------IKDLR 332
            Y+  R     ++ ++TP++    L+  SGH   Y   MF    AD+         K  +
Sbjct: 296 QYVVDRHQDYGFDFVHTPEISKGGLFHTSGHLPYYADTMFPPMLADEERDAEGNITKAGQ 355

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
            + LK MNCP H  +F    +SYRELP+R  E G  YR E SG +HGL R+RGFTQDD+H
Sbjct: 356 EYYLKAMNCPMHNLIFRSRGRSYRELPLRFFEMGHDYRYEKSGVVHGLTRMRGFTQDDSH 415

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK------RVGSDALWDDAEN 446
            +CT EQ   E     +  +SI K FG     ++LSTR E        +GSDA W  A  
Sbjct: 416 TYCTPEQAGEEIRAQIDFFLSILKAFGLTDFYLELSTRDEDGAKKDKFIGSDADWAAATQ 475

Query: 447 IMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF 506
            ++   D         +      G  AFYGPK    +KDAIGR WQ  TIQ DFN P RF
Sbjct: 476 ALQDACDASG------LEVVPDPGGAAFYGPKVSVQVKDAIGRTWQMSTIQYDFNQPERF 529

Query: 507 NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVE 566
           +  Y  +      P+MIH A  GS+ERFIG++ E++ G  P WLSP+Q  +  +  +   
Sbjct: 530 DLEYTAADGTHQRPIMIHSAKLGSVERFIGVLTEHYAGAFPAWLSPVQVRLIPVAEAFDA 589

Query: 567 YAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS 626
           Y  ++A  L++  + +E D  ++    KIR  S  KIP  +I G ++A   ++  R    
Sbjct: 590 YVDDVAAQLRAQGVRVEVDHSDDRFGKKIRNASKDKIPFTLIAGGEDAEAGAVSFRFRDG 649

Query: 627 TTTQKVSLLDAIPILT 642
             T  V + +A+  + 
Sbjct: 650 QQTNGVPVKEAVAHIV 665


>gi|326773248|ref|ZP_08232531.1| threonine--tRNA ligase [Actinomyces viscosus C505]
 gi|326636478|gb|EGE37381.1| threonine--tRNA ligase [Actinomyces viscosus C505]
          Length = 683

 Score =  547 bits (1408), Expect = e-153,   Method: Composition-based stats.
 Identities = 236/676 (34%), Positives = 350/676 (51%), Gaps = 45/676 (6%)

Query: 1   MPSD--IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS 58
           M     I++T  DG+ +      TG+ + +   +      VA+ +NG+  DL   V  G+
Sbjct: 1   MSDQPMIEITL-DGAPRTIEAGITGALLLQDTVK--KDGVVAMRVNGEPWDLERQVPAGA 57

Query: 59  I-EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSD 117
           + E IT      L ++RHS  H+MA+AVQ ++P+V + IGP I DGFYYDF      + +
Sbjct: 58  VVEPITLSSEDGLNILRHSATHVMAQAVQEMFPDVNLGIGPFITDGFYYDFGAIDAVTPE 117

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK--------- 168
            L +IEK+M+ I+     F+++ ++  +A    E   + YK+E++ +  A          
Sbjct: 118 MLREIEKRMKRIVKEGQRFVRRDIT--EAEGREELADQPYKLELITTKGAGAEGASVEVG 175

Query: 169 -------ENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIY 221
                  +NV       W DLCRGPH+ ST  + + F L K + AYW+GD +   L RIY
Sbjct: 176 AGGLTMYDNVRRDGTVAWTDLCRGPHLPSTRLIGQGFALTKSSSAYWKGDQSGDSLQRIY 235

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLI 280
           GTAW ++ +L  Y   L E+ KRDHRKL  E+DL+   E+ G G++ +H KG  +   + 
Sbjct: 236 GTAWASKDDLKAYQTRLAEAAKRDHRKLGAELDLYSFPEEIGPGLVVFHPKGAMLRHQIE 295

Query: 281 SYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT-------IKDLR 332
            Y+  R +   ++ ++TP++    L+  SGH   Y   MF    AD+         K  +
Sbjct: 296 QYVVDRHLDYGFDFVHTPEISKGGLFHTSGHLPYYADTMFPPMLADEERDAEGNITKAGQ 355

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
            + LK MNCP H  +F    +SYRELP+R  E G  YR E SG +HGL R+RGFTQDD+H
Sbjct: 356 EYYLKAMNCPMHNLIFRSRGRSYRELPLRFFEMGHDYRYEKSGVVHGLTRMRGFTQDDSH 415

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK------RVGSDALWDDAEN 446
            +CT EQ   E     +  +SI K FG     ++LSTR E        +GSDA W  A  
Sbjct: 416 TYCTPEQAGEEIRAQIDFFLSILKAFGLTDFYLELSTRDEDGAKKDKFIGSDADWTAATQ 475

Query: 447 IMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF 506
            ++   D         +      G  AFYGPK    +KDAIGR WQ  TIQ DFN P RF
Sbjct: 476 ALQDACDASG------LEVVPDPGGAAFYGPKVSVQVKDAIGRTWQMSTIQYDFNQPERF 529

Query: 507 NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVE 566
           +  Y  +      P+MIH A  GS+ERFIG++ E++ G  P WLSP+Q  +  +  +   
Sbjct: 530 DLEYTAADGTHQRPIMIHSAKLGSVERFIGVLTEHYAGAFPAWLSPVQVRLIPVAEAFDA 589

Query: 567 YAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS 626
           Y  ++A  L++  + +E D  ++    KIR  S  KIP  +I G ++A   ++  R    
Sbjct: 590 YVDDVAAQLRAQGVRVEVDHSDDRFGKKIRNTSKDKIPFTLIAGGEDAEAGAVSFRFRDG 649

Query: 627 TTTQKVSLLDAIPILT 642
             T  V + +A+  + 
Sbjct: 650 QQTNGVPVKEAVAHIV 665


>gi|319957838|ref|YP_004169101.1| ser-tRNA(thr) hydrolase ;threonyl-tRNA synthetase [Nitratifractor
           salsuginis DSM 16511]
 gi|319420242|gb|ADV47352.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Nitratifractor
           salsuginis DSM 16511]
          Length = 605

 Score =  547 bits (1408), Expect = e-153,   Method: Composition-based stats.
 Identities = 248/612 (40%), Positives = 374/612 (61%), Gaps = 23/612 (3%)

Query: 39  VAVAIN--GKVCDLSDPVR--EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           +   IN  G++ D        EG  EI     P +L +IRHS AH+MA+A++ ++P+ Q 
Sbjct: 5   IIGYINDRGELVDTQSAGDSCEGCREIFFDNSPEALEIIRHSTAHLMAQAIRELYPDAQF 64

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            +GP++++GFYYDF   +    ++L +IEKKM+E++ +  P  K  +S  +A E  + K 
Sbjct: 65  FVGPVVDEGFYYDFRTSEKIGEEDLKKIEKKMKELVKKKLPIEKYEISKAEAVE--KFKN 122

Query: 155 EAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNR 214
           +  K  +L++IP+ E V++YRQG++ DLCRGPHV +T  +  F KL +VAGAY  GD N 
Sbjct: 123 DDLKQAVLKNIPS-ETVSIYRQGDFEDLCRGPHVPNTRFLHNF-KLTRVAGAYLGGDENA 180

Query: 215 PMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGW 273
            ML+RIYG A+  ++ L ++   +EE+++RDHRKL  E++LF   E+   G+ FW  KG 
Sbjct: 181 EMLTRIYGIAFADKESLKKWQQMMEEAKRRDHRKLGTELELFMFNEEAGAGLPFWLPKGA 240

Query: 274 KIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           ++   L   + R   +  YE +  P++L   +W+ SGH+  Y  NM+       T  D +
Sbjct: 241 RLRSKLEQILWRSHRRRGYEPVRGPEILKADMWRTSGHYACYGENMYL------TEIDGQ 294

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
            + LKPMNC GH+ +F +  KSYR+LP++  E+G V+R+E SG LHGL+RVR FTQDDAH
Sbjct: 295 EYGLKPMNCIGHILIFKNSTKSYRDLPLKYFEYGVVHRHEKSGVLHGLLRVREFTQDDAH 354

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
           +FCT EQ+    L++   + ++ K FGFE  M ++ST+PEK +G D +W+ A   +K  L
Sbjct: 355 IFCTPEQIKPVVLEVVEFVDAVMKKFGFEYTM-EISTKPEKAIGDDEVWEVATQALKDAL 413

Query: 453 DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
           D      ++ +  G+  G GAFYGPK +  + DAIGR WQCGT+QVDFNLP RF+  YV 
Sbjct: 414 D------ENGLEYGIDEGGGAFYGPKIDVKITDAIGRKWQCGTVQVDFNLPERFDVEYVA 467

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIA 572
             + +  PVMIHRA+ GS ERFI I+ E++ G  P +++P Q I   I +    YA+E+A
Sbjct: 468 EDNTRKRPVMIHRAILGSFERFIAILTEHYAGEFPFFIAPTQVIFVPIAAEHTAYAKELA 527

Query: 573 NLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
             L    +  E   RN+++N +IR    +K+P ++I GD+E   RS+ +R         +
Sbjct: 528 EALMEREIDSEIYDRNDSLNKRIRLAEKQKVPYVVIVGDEEVKNRSVAVRDRRKKEQYNL 587

Query: 633 SLLDAIPILTKE 644
           S  D +  L+KE
Sbjct: 588 SADDFMLQLSKE 599


>gi|67920215|ref|ZP_00513735.1| Threonyl-tRNA synthetase, class IIa [Crocosphaera watsonii WH 8501]
 gi|67857699|gb|EAM52938.1| Threonyl-tRNA synthetase, class IIa [Crocosphaera watsonii WH 8501]
          Length = 642

 Score =  547 bits (1408), Expect = e-153,   Method: Composition-based stats.
 Identities = 262/618 (42%), Positives = 361/618 (58%), Gaps = 47/618 (7%)

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            ++  +P  L  IRH+CAH+MA AVQ ++PE +V IGP  + GFYYDFD+ QPF+ +EL 
Sbjct: 27  PLSIANPEKLERIRHTCAHVMAMAVQILFPETKVTIGPTTDKGFYYDFDRPQPFAPEELK 86

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE-- 178
           +I K+M+ II  + P +++ ++ E+ +   E   E YK+EIL+SIP  E +T Y  G   
Sbjct: 87  KITKQMRFIIKANLPIIREEITREEMKAEIEQLGEPYKLEILDSIPEGETITRYYIGSTD 146

Query: 179 -------------------------------WFDLCRGPHVRSTGQVKK-FFKLMKVAGA 206
                                          W+DLC G H+  TG++    F L  VAGA
Sbjct: 147 GDGLPNVGQKLKDALPEPSSIKPVKIPSTVSWWDLCAGHHINYTGEINPKAFALESVAGA 206

Query: 207 YWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGV 265
           YWRGD  +  L RIYGTAW T ++L  YL   EE+++RDHRKL +E+ LF I E+ G G+
Sbjct: 207 YWRGDETKAQLQRIYGTAWETPEQLDAYLKQREEAKRRDHRKLGKELKLFSIQENAGGGL 266

Query: 266 IFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCA 324
           +FWH +G K+   +  Y R+  +   YE + TP V +  LW+ SGH+D YR NMF     
Sbjct: 267 VFWHPRGAKMRYVIEDYWRKAHLDGGYELLYTPHVANLDLWKTSGHFDFYRENMF----- 321

Query: 325 DDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVR 384
           D    + + + +KPMNCP HV  + + L SYRE P+R AE G+VYR E SG LHGLMRVR
Sbjct: 322 DSMKIEEQAYQIKPMNCPFHVLTYKNELHSYREFPLRWAELGTVYRYERSGVLHGLMRVR 381

Query: 385 GFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
           GFTQDDAHVFC   Q+ +E L + NL   I  DFGF+   V LSTRP+K VG+D  W+ A
Sbjct: 382 GFTQDDAHVFCLPTQIASEILGVLNLTEKILSDFGFKDYEVNLSTRPDKSVGTDEGWELA 441

Query: 445 ENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPS 504
              +   L+          +     G GAFYGPK +  +KDAIGR WQC TIQVDFNLP 
Sbjct: 442 TQALVEALN------GKGWDYIEDKGGGAFYGPKIDIKIKDAIGRTWQCSTIQVDFNLPE 495

Query: 505 RFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA 564
           RF+  YV     +  P+MIHRA+FGS+ERF GI+IEN+ G+ PLWL+PIQ  +  ++ + 
Sbjct: 496 RFDMEYVAVDGSRQRPIMIHRAIFGSLERFYGILIENYAGDFPLWLAPIQLRLLPVSEAQ 555

Query: 565 VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRF 624
           +EY + +   LK     +E D   E +  +IR   ++KIP++ I G KE   +++ IR  
Sbjct: 556 IEYGETVVATLKQAGYRVEIDCTGERLGKQIRNAELEKIPVVAIVGKKEVETQTLSIRTR 615

Query: 625 GSTTTQKVSLLDAIPILT 642
                  ++L +      
Sbjct: 616 QQGDIGTMTLTELKESFK 633


>gi|301167107|emb|CBW26686.1| threonyl-tRNA synthetase [Bacteriovorax marinus SJ]
          Length = 584

 Score =  547 bits (1408), Expect = e-153,   Method: Composition-based stats.
 Identities = 236/590 (40%), Positives = 360/590 (61%), Gaps = 19/590 (3%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQ--VAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQ 127
           L  IRHS AH+MA+A+  ++P+      IGP+IE GFYYD D +     ++L +IE +MQ
Sbjct: 6   LDTIRHSTAHLMAQAISRVFPDTHIQFGIGPVIEHGFYYDVDMDHRLVDEDLEKIEAEMQ 65

Query: 128 EIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPH 187
            +I  +    ++ +S  +A + F+ K +  K +++ S      ++ Y+QGE+ DLCRGPH
Sbjct: 66  NLIKENLSIERKVMSRTEALDFFKDKNDELKQDLINSFEDDAEISCYQQGEFIDLCRGPH 125

Query: 188 VRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHR 247
           V STGQ+ KFFKL+ +AGAYWRGD N  ML R+Y   +N +++L  +L FLEE++KRDHR
Sbjct: 126 VESTGQLPKFFKLLNIAGAYWRGDENNKMLQRVYAACFNDKKQLKAHLNFLEEAKKRDHR 185

Query: 248 KLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQ 306
           KL ++++LFH         F+  KG  ++  LI +MR   +  DY+E+ TPQ+LD  LW 
Sbjct: 186 KLGKDLELFHFNSVAPASPFFMPKGAFVYNRLIEFMREIYRKYDYQEVITPQILDSDLWH 245

Query: 307 QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFG 366
            SGH++ Y+ NM+  +       D R +A+KPMNCP H+ +F H   SYR+LP+R A+FG
Sbjct: 246 TSGHYEHYKENMYFSRI------DEREYAVKPMNCPCHMLMFKHYKYSYRDLPMRYADFG 299

Query: 367 SVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK 426
            ++R E +G++ GL RVR F QDDAH+F   + + +E  K+  +    Y+ FGF  I V 
Sbjct: 300 RLHRYEKAGAVTGLTRVRTFCQDDAHIFIDMDGIQDEITKLMEMFFICYEHFGFTGIKVN 359

Query: 427 LSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDA 486
           LSTRPEK+ G DA WD AEN ++  L    +         +  G+GAFYGPK +  + DA
Sbjct: 360 LSTRPEKKSGDDATWDKAENALEEALKKSGH------EYFIKEGDGAFYGPKIDVEIADA 413

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNL 546
           +GR +Q GTIQ+DF LP RF   Y N+      PV+IHRA+ GS+ERF G+ +E+  G  
Sbjct: 414 LGRYYQLGTIQLDFQLPERFGLSYTNAQGNDERPVVIHRALLGSLERFFGVYLEHVAGVF 473

Query: 547 PLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPI 605
           P WL+P QA++  + +   +++A ++ + L +  L ++ D RNE++ YK R+    K P 
Sbjct: 474 PFWLAPEQAVIVPVNNEFHLDFANKLQSELFAMGLRVKVDDRNESMGYKTRQIQKSKAPF 533

Query: 606 IIICGDKEASERSIGIRRFGSTTTQKVSLLD---AIPILTKESLPPDCQK 652
           +I+ GD+E    S+ +R+ G   T+ +++ +       L  E +P   ++
Sbjct: 534 MIVIGDREMENNSVSLRKHGEKKTESLTIEELKKLFSELDAEFIPAKLRQ 583


>gi|87124051|ref|ZP_01079901.1| threonyl-tRNA synthetase [Synechococcus sp. RS9917]
 gi|86168620|gb|EAQ69877.1| threonyl-tRNA synthetase [Synechococcus sp. RS9917]
          Length = 612

 Score =  547 bits (1408), Expect = e-153,   Method: Composition-based stats.
 Identities = 257/604 (42%), Positives = 361/604 (59%), Gaps = 20/604 (3%)

Query: 51  SDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK 110
           + PV + ++ +    +   L  IRHS +H+MA AVQ ++P+ QV IGP  E GFYYDFD 
Sbjct: 15  TTPVPDAAVVLPKTSESNQLLRIRHSMSHVMAMAVQHLFPQAQVTIGPWTETGFYYDFDN 74

Query: 111 EQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN 170
             PF+  +L  I K+M +II R  P  +  +S ++A    +++ E YK+EIL  +  +E 
Sbjct: 75  PDPFTEADLKAIRKEMIKIINRKLPLERIAVSRDEAEAKIKAQNEPYKLEILAGL--QEP 132

Query: 171 VTLYRQGE-WFDLCRGPHVRSTGQVKK-FFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQ 228
           +TLY  GE W+DLC GPHV +T ++    F L  VAGAYWRGD  +  L RIYGTAW T 
Sbjct: 133 ITLYTLGEQWWDLCAGPHVDNTSELNPKAFALESVAGAYWRGDETKAQLQRIYGTAWETP 192

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-K 286
           ++L +Y    EE+ +RDHR+L +++DLF I ++   G++FWH +G ++   +  + R+  
Sbjct: 193 EQLAEYQRRKEEALRRDHRRLGKDLDLFSIEDEAGAGLVFWHPRGARMRLLIEDFWRQAH 252

Query: 287 IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA 346
            +  Y+ + TP V D  LW+ SGH D Y  +MF     D+     R + LKPMNCP HV 
Sbjct: 253 FEGGYDLLYTPHVADIGLWKTSGHLDFYSESMFGPMQVDE-----REYQLKPMNCPFHVL 307

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
            +   L+SYRELP+R AE G+VYR E  G +HGLMRVRGFTQDDAHVFC  EQ+ +E L+
Sbjct: 308 TYASRLRSYRELPIRWAELGTVYRYERPGVMHGLMRVRGFTQDDAHVFCLPEQISDEILR 367

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           I NL  +I   F F    + LSTRPEK +G DA+WD A   +   L+      +      
Sbjct: 368 ILNLTETILSAFDFRNYEINLSTRPEKSIGDDAVWDLATQGLIEALE------RKGWAYK 421

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
           V  G GAFYGPK +  ++DAIGR WQC TIQ+DFNLP RF   YV +   K  P+MIHRA
Sbjct: 422 VDAGGGAFYGPKIDLKIEDAIGRMWQCSTIQLDFNLPERFALDYVAADGSKQRPIMIHRA 481

Query: 527 VFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF 586
           +FGS+ERF GIM EN+ G+ P WL+P Q  +  +T   +  AQ++++ L++  +    D 
Sbjct: 482 IFGSLERFFGIMTENYAGDFPFWLAPEQIRLLPVTDEVLADAQQLSDQLRAAGIRATVDR 541

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV---SLLDAIPILTK 643
             E +   IR     KIP++ + G KEA + S+ +R         V   +L++A     +
Sbjct: 542 SGERLGKLIRTGEQMKIPLLAVIGAKEAEQGSVSLRSRRDGDLGSVNRKALIEAASQANQ 601

Query: 644 ESLP 647
           E L 
Sbjct: 602 ERLA 605


>gi|297626431|ref|YP_003688194.1| Threonyl-tRNA synthetase (Threonine--tRNA ligase) (ThrRS)
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
 gi|296922196|emb|CBL56764.1| Threonyl-tRNA synthetase (Threonine--tRNA ligase) (ThrRS)
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
          Length = 680

 Score =  547 bits (1408), Expect = e-153,   Method: Composition-based stats.
 Identities = 243/683 (35%), Positives = 361/683 (52%), Gaps = 51/683 (7%)

Query: 1   MPSDIKLTF---PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG 57
           M S I +     P    K      TG D+         K  VA+ +NG+  DL+  +  G
Sbjct: 1   MSSTITIVHNAEP--ETKVIEDTTTGLDLF-----GDDKSIVAMHLNGETVDLATQLSAG 53

Query: 58  SI-EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSS 116
            + E ++      L+++RHS AH+ A+A+Q I+P+ ++ IGP I DGFYYDF  E P S+
Sbjct: 54  DVVEPVSMTSDEGLSIVRHSAAHVTAQALQDIFPQARLGIGPPITDGFYYDFQTE-PLSA 112

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-------------- 162
           D+L Q+EKKMQ II +   F+++ +S E+A  L E   E YK+E++              
Sbjct: 113 DDLKQVEKKMQAIIKQRQRFVRRVVSEEEA--LREEANEPYKLELIADKGHPSDDDNSSV 170

Query: 163 ----ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLS 218
                 +   +NVT      W DLCRGPHV +TG +K      K + AYWRGD +   L 
Sbjct: 171 EVGGNELTMYDNVTRNGTVAWRDLCRGPHVPNTGYIKAVALT-KTSAAYWRGDQHNAQLQ 229

Query: 219 RIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQ 277
           R+YGTAW T+ +L  Y   + E+ KRDHRKL +E+DLF   E+ G G++ +H KG  +  
Sbjct: 230 RVYGTAWATRDDLKAYQTRMAEAAKRDHRKLGQELDLFSFPEEIGPGLVVFHPKGGILRH 289

Query: 278 TLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTI-------K 329
            + SY+ +R I   ++ ++TP +    L+  SGH   Y   MF     D+ +        
Sbjct: 290 EIESYITKRHIDAGFDLVDTPIISKGDLFHTSGHLPYYADTMFPPMTVDEEVDAEGNVRH 349

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
             + + LK MNCP H  +F    +SYRELP+R  E G  +R E SG + GL R+RGFTQD
Sbjct: 350 QGQEYYLKAMNCPMHNLIFRSRGRSYRELPLRFYELGRDFRYEKSGVVQGLTRMRGFTQD 409

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP---EKRVGSDALWDDAEN 446
           D+H +CT EQ  +E   +    +SI +DFG ++  ++LSTR     K +GSD  W+ A  
Sbjct: 410 DSHTYCTPEQAGDEIKMLLGFFLSILRDFGLKEFYLELSTRDASSSKFIGSDEDWEAATE 469

Query: 447 IMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF 506
           I++   ++        +      G  AFYGPK     KDA+GR WQ  T+Q DFN P+RF
Sbjct: 470 ILRVAAESTG------LELVADPGGAAFYGPKVSVQAKDALGRTWQMSTVQYDFNQPARF 523

Query: 507 NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVE 566
              Y  +      PVMIH A  GS+ERFIG++ E++ G  P WLSP+Q +   +      
Sbjct: 524 GLEYTAADGSHQQPVMIHCAKLGSVERFIGVLTEHYAGAFPAWLSPVQVVGIPVAGEFNG 583

Query: 567 YAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS 626
           Y   IA  L+   + +E D  ++ +  KIR  + +K+P ++I G+K+   +++  R    
Sbjct: 584 YLDTIATRLREKGVRVEVDESDDRMQKKIRNATRQKVPFMLIAGEKDREAQAVSFRFRDG 643

Query: 627 TTTQKVSLLDAIPILTKESLPPD 649
           +    V + DAI  + +     D
Sbjct: 644 SQLNGVPIDDAIDRIVEHITSRD 666


>gi|315604309|ref|ZP_07879375.1| threonine--tRNA ligase [Actinomyces sp. oral taxon 180 str. F0310]
 gi|315314015|gb|EFU62066.1| threonine--tRNA ligase [Actinomyces sp. oral taxon 180 str. F0310]
          Length = 677

 Score =  547 bits (1408), Expect = e-153,   Method: Composition-based stats.
 Identities = 238/674 (35%), Positives = 351/674 (52%), Gaps = 47/674 (6%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
           MP DI L   DG  +  P   TG+   E       +  VA+ +NG   DL+  + EG+ +
Sbjct: 1   MP-DISLVI-DGQPETVPAGTTGTAWFEK-----NRSVVAIKVNGVARDLASALEEGTTV 53

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           E IT E    L ++RHS  H++A+AVQ ++P+V + IGP I DGFYYDF      + + L
Sbjct: 54  EAITLESEDGLNILRHSATHVLAQAVQDVFPDVNLGIGPFITDGFYYDFGNIDAVTPELL 113

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE---------------- 163
            ++EK+M+ II     F+++ +  + AR   E   + YK+E++                 
Sbjct: 114 RELEKRMKRIIKEGQRFVRREIGEDDAR--VELADQPYKLELVTTKGKGAEGASVEVGAG 171

Query: 164 SIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
           S+   +NV       W DLCRGPH+ ST  +   F L K + AYW+GD N   L RIYGT
Sbjct: 172 SLTMYDNVRRDGTVAWKDLCRGPHLPSTNLIGNGFALTKSSAAYWKGDQNGDQLQRIYGT 231

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISY 282
           AW ++++L  Y   ++E+E+RDHR+L  E+DLF   E+ G G++ +H KG  +   + SY
Sbjct: 232 AWASKEDLVAYQERIKEAERRDHRRLGVELDLFSFPEEIGPGLVVFHPKGGILRHEIESY 291

Query: 283 M-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT-------IKDLRTF 334
           +  R  +  ++ ++TP++    L+  SGH   Y   MF     D+         K  + +
Sbjct: 292 VTDRHKRAGFDFVHTPEISKGGLFHTSGHLPYYADTMFPPMLVDEERDADGNVTKAGQEY 351

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
            LK MNCP H  +F    +SYRELP+R  E G  YR E SG +HGL R+RGFTQDD+H +
Sbjct: 352 YLKAMNCPMHNLIFRSRGRSYRELPLRFYELGHDYRYEKSGVVHGLTRMRGFTQDDSHTY 411

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK------RVGSDALWDDAENIM 448
           CT EQ   E        +SI   FG +   ++LSTR E        +GSD  W  A   +
Sbjct: 412 CTPEQASQEIRTQIEFFLSILSAFGLKDFYLELSTRDEDGKKKDKFIGSDEDWAAATKAL 471

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
           +             ++     G  AFYGPK    +KDAIGR WQ  TIQ DFN P RF+ 
Sbjct: 472 QDACAATG------LDLVPDPGGAAFYGPKVSVQVKDAIGRTWQMSTIQYDFNQPERFDL 525

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYA 568
            Y  +   +  PVMIH A  GS+ERFIG++ E++ G  P WLSP+Q  +  +  +   Y 
Sbjct: 526 EYTAADGTRQRPVMIHSAKLGSVERFIGVLTEHYAGAFPAWLSPVQVRLIPVAEAFDGYV 585

Query: 569 QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
            ++A  L+   + +ETD  ++    KIR  S  KIP  +I G ++    ++  R    + 
Sbjct: 586 ADVAAKLRERGVRVETDLSDDRFGKKIRNASKDKIPFTLIAGGEDVEAGAVSFRLRDGSQ 645

Query: 629 TQKVSLLDAIPILT 642
              V +  A+ ++ 
Sbjct: 646 HNGVPVERAVDLIV 659


>gi|331232891|ref|XP_003329107.1| threonyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309308097|gb|EFP84688.1| threonyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 765

 Score =  546 bits (1407), Expect = e-153,   Method: Composition-based stats.
 Identities = 227/676 (33%), Positives = 337/676 (49%), Gaps = 71/676 (10%)

Query: 3   SDIKLTFPDGSIKN-FPVHATGSDVAESISRSLAKKAVAVAIN--GK----VCDLSDPVR 55
             I +  P G  K       T  ++A S+S+SLA++ V   +   G     + DL  P+ 
Sbjct: 110 EKIMVQLPQGDPKEAVSWQTTPLEIARSLSKSLAERIVIAEVTLPGVAKPILWDLERPLE 169

Query: 56  E-GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF----DK 110
              S+ ++  E      V  HS AH++ EA +  +    + IGP  ++GF+Y+       
Sbjct: 170 SSCSLRLLDFETDEGKRVFWHSSAHVLGEAAEKHY-GCHLCIGPPTDEGFFYEMGMGLSG 228

Query: 111 EQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN 170
           E+   + +   ++K  +  I                              I   IP   +
Sbjct: 229 ERAIQATDYPSLQKLAEMAIYNKYK----------------------TYLINSKIPDGSS 266

Query: 171 VTLYRQGEWFDLCRGPHVRSTGQVKKFF-----------KLMKVAGAYWRGDSNRPMLSR 219
            T+YR G   DLC GPH+ +TGQ+K F               K + +Y+ GDS    L R
Sbjct: 267 TTVYRCGPMIDLCVGPHIPNTGQIKAFSVLKICANLFASHNEKNSASYFLGDSANDSLQR 326

Query: 220 IYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTL 279
           IYG ++  ++ + +Y  FLEE+ KRDHRK+ ++ DLF   E   G  FW   G +I+ TL
Sbjct: 327 IYGISFPDKKAMAEYKKFLEEAAKRDHRKIGKDQDLFFFHELSPGSCFWLPHGTRIYNTL 386

Query: 280 ISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKP 338
           + + + + +   Y+E+ +P + +  LWQ SGHW++Y  +MF +        +  TF LKP
Sbjct: 387 VEFFKSEYRKRGYDEVISPNMYNAKLWQTSGHWENYADSMFKL------DIEKETFGLKP 440

Query: 339 MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE 398
           MNCPGH  +F    +SYRELP+R+A+FG ++RNE SG+L GL RVR F QDDAH FCT E
Sbjct: 441 MNCPGHCLIFGSRDRSYRELPIRMADFGVLHRNEASGALSGLTRVRRFCQDDAHHFCTTE 500

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNS 458
           Q+ +E   I +L+ ++Y   GF   + KLSTRP+  +G   +W+ AE  +   LD     
Sbjct: 501 QIDSEMAGIFDLLKTVYGMLGFTYKL-KLSTRPDNYIGDLEVWNLAEKRLGQALDEFVGP 559

Query: 459 SQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS--- 515
            +      V  G+GAFYGPK +  + DA+ R  QC TIQ+DF LP RF   Y        
Sbjct: 560 GE----WDVDPGDGAFYGPKIDITISDALKRRHQCATIQLDFQLPERFKLQYRTDQGGQG 615

Query: 516 ------EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQ 569
                 E+  PVMIHRA+ GS+ERF  I+ E+F G  P WLSP Q +V  + +    YAQ
Sbjct: 616 AEAGAEERKRPVMIHRAIMGSVERFTAILTEHFAGKWPFWLSPRQVMVIPVAAPHKAYAQ 675

Query: 570 EIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS--- 626
           E+A  L    L  + D  + T+  KIR   +     I++ G +E   RS+ +R       
Sbjct: 676 EVAQKLWDAGLYADADMSDATLPKKIRNGEVASYNFILVVGSEELESRSVNVRSADDVGQ 735

Query: 627 -TTTQKVSLLDAIPIL 641
               + +    A+  L
Sbjct: 736 KGKAEALPFEAALEKL 751


>gi|315054053|ref|XP_003176401.1| threonyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
 gi|311338247|gb|EFQ97449.1| threonyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
          Length = 765

 Score =  546 bits (1407), Expect = e-153,   Method: Composition-based stats.
 Identities = 229/690 (33%), Positives = 355/690 (51%), Gaps = 67/690 (9%)

Query: 4   DIKLTFP-DG---SIKNFPVHATGSDVAESISRSLAKKAVAVAING-KVCDLSDPVR-EG 57
           DI +T   +G   ++     H+T     + I + L+   V   ++G ++ DL  P+  + 
Sbjct: 80  DITVTLEVNGAPSTVIAQAWHSTPGSFLKDIPKELSSSVVIAKLDGKELWDLDRPLERDC 139

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ--PFS 115
            I  +  +      V  HS AH + EA +  +    ++ GP    GF+YD    +     
Sbjct: 140 RIRYLPFDSVEGREVFWHSSAHALGEACECHY-GCLLSHGPPTAQGFFYDMAIPEGGVVH 198

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
             +   ++ K  +I      F +  +S +  +++F   K  YK+  ++++   E+ T+YR
Sbjct: 199 QTDYPALDAKTAKIFKEKQSFDRLEVSKDNLKKMFGYSK--YKLHYIDNLVEGESSTVYR 256

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
            G   DLCRGPH+++TG++K   K+ + + AY+ GD     L RI G A+  ++ L ++L
Sbjct: 257 CGTLVDLCRGPHIQNTGKIK-AMKITQNSSAYFLGDQTNDALQRIRGVAFPDKKLLQEHL 315

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEI 294
            FLEE+EKR+H K+ +E +LF   E   G  F    G KIF  L   +R + +   Y+E+
Sbjct: 316 KFLEEAEKRNHLKIGKEQELFFFDEVSPGCPFLLPNGTKIFNALQKLLRTEYRKRGYQEV 375

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
            +P + D  +W+QSGHW  Y+ +MF +        + R +ALKPMNCPGH  +F H  +S
Sbjct: 376 QSPNMYDVGIWRQSGHWAHYKDDMFKLDV------EKRDWALKPMNCPGHCIMFGHRERS 429

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YRELP+R+A+FG ++RNE SG+LHGL RVR F QDD H+FCT  Q+  E   + + + +I
Sbjct: 430 YRELPLRMADFGVLHRNEASGALHGLTRVRKFQQDDTHIFCTDNQIIGEIEGLFDFLRAI 489

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           Y  FGF    +KLSTRPEK +G    WD AE  ++  L   K +        +  G+GAF
Sbjct: 490 YGLFGF-SFKLKLSTRPEKYLGKLETWDFAEAQLREALTKFKGA-----EWEIDEGDGAF 543

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC---------------- 518
           YGPK +  + DA+ R+ QC TIQ+D+ LP  F   Y+   +                   
Sbjct: 544 YGPKIDITISDALKREHQCATIQLDYQLPLNFKLEYMTGETIPKSAAPAAPQAPQAEAKP 603

Query: 519 ----------------------HPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI 556
                                  PVMIHRA+ GS ERF GI+IE+F G  P WLSP Q +
Sbjct: 604 EGGSNSSQAQPSDSSNPGPGRARPVMIHRAIIGSFERFFGILIEHFGGKWPFWLSPRQIL 663

Query: 557 VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASE 616
           +  + +SA +Y +E+  +L+   L+++ D    T+  KIR   + +   I + G +E   
Sbjct: 664 IVPVMASANDYVEELQEILRGDKLNVDIDLSGHTMQKKIRNGQLAQYNFIFVVGAQEKES 723

Query: 617 RSIGIRRFGSTTTQK----VSLLDAIPILT 642
           RS+ IR     ++Q     V L +A   L 
Sbjct: 724 RSVNIRNRDDPSSQTKGSLVPLEEARAKLR 753


>gi|78184510|ref|YP_376945.1| threonyl-tRNA synthetase [Synechococcus sp. CC9902]
 gi|123757112|sp|Q3AYC6|SYT_SYNS9 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|78168804|gb|ABB25901.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Synechococcus
           sp. CC9902]
          Length = 611

 Score =  546 bits (1406), Expect = e-153,   Method: Composition-based stats.
 Identities = 250/598 (41%), Positives = 358/598 (59%), Gaps = 21/598 (3%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           + +    +   L  IRHS +H+MA AVQ ++P  QV IGP  E GFYYDFD  +PF+ D+
Sbjct: 23  VVLPKTSESEQLLKIRHSMSHVMAMAVQKLFPNAQVTIGPWTETGFYYDFDNPEPFTEDD 82

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L  I+K+M +II R  P  +  +S ++A    +++ E YK+EILE +  +E +TLY  G+
Sbjct: 83  LKAIKKEMGKIIGRKLPLERIEVSRDEAETRIKAQNEPYKLEILERL--QEPITLYTLGD 140

Query: 179 -WFDLCRGPHVRSTGQVKK-FFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
            W+DLC GPHV +T ++    F+L  VAGAYWRGD  +  L RIYGTAW T ++L ++  
Sbjct: 141 QWWDLCAGPHVENTKELHPKAFELESVAGAYWRGDETKAQLQRIYGTAWETPEQLAEHKR 200

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEI 294
              E+ +RDHR+L ++++LF I ++   G++FWH +G ++   +  + R+   +  YE +
Sbjct: 201 RKVEALRRDHRRLGKDLELFSIEDEAGAGLVFWHPRGARMRLLIEDFWRQAHFEGGYELL 260

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
            TP V D  LW+ SGH D Y  +MF     D+     R + LKPMNCP HV  +   L+S
Sbjct: 261 YTPHVADISLWKTSGHLDFYAESMFGPMQVDE-----REYQLKPMNCPFHVLTYASKLRS 315

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YRELP+R AE G+VYR E  G +HGLMRVRGFTQDDAHVFC  +Q+ +E L+I +L   I
Sbjct: 316 YRELPIRWAELGTVYRYERPGVMHGLMRVRGFTQDDAHVFCLPDQISDEILRILDLTERI 375

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
              F F    + LSTRPEK +GS+A+W+ A   +   L+      +   N  +  G GAF
Sbjct: 376 LSTFDFNHYEINLSTRPEKSIGSEAVWELATKGLTEALE------RKGWNFKIDEGGGAF 429

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  ++DAIGR WQC TIQ+DFNLP RF   YV +   K  P+MIHRA+FGS+ERF
Sbjct: 430 YGPKIDLKIEDAIGRMWQCSTIQLDFNLPERFGLDYVAADGSKQQPIMIHRAIFGSLERF 489

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
            GIM EN+ G+ P WL+P Q  +  +T     YA+++ N LK+  +    D   + +   
Sbjct: 490 FGIMTENYAGDFPFWLAPEQIRLLPVTDDVQPYAEQVLNQLKTAGIRATIDQSGDRLGKI 549

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           IR     KIP++ + G KEA + +I +R          S+      L K +   + ++
Sbjct: 550 IRTGEQMKIPVLAVIGAKEAEQNAISLRSRRDGDLGVTSVD----ALLKAAQRANAER 603


>gi|148706886|gb|EDL38833.1| threonyl-tRNA synthetase-like 1 [Mus musculus]
          Length = 630

 Score =  546 bits (1406), Expect = e-153,   Method: Composition-based stats.
 Identities = 221/637 (34%), Positives = 343/637 (53%), Gaps = 29/637 (4%)

Query: 34  LAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEV 92
           LA  AVA  +NG++ DL  P+  +  +  +T + P   AV  HS AH++  A +      
Sbjct: 3   LADTAVAAEVNGELYDLDRPLETDCHLRFLTFDSPEGKAVFWHSSAHVLGAAAEQQL-GA 61

Query: 93  QVAIGPIIEDGFYYDFD--KEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELF 150
            +  GP  E GFY+DF   KE+   S EL  +E+  QE+IA   PF +   S ++ R+LF
Sbjct: 62  VLCRGPSTESGFYHDFFLGKERTVRSAELPILERICQELIAAAQPFRRLEASRDQLRQLF 121

Query: 151 ESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRG 210
           +     +K+ ++E        T+Y  G   DLCRGPH+R TGQ+    KL+  + A WR 
Sbjct: 122 KDNH--FKLHLIEEKVTGPTATVYGCGMSVDLCRGPHLRHTGQIG-ALKLLTNSSALWRS 178

Query: 211 DSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHR 270
                 L R+ G ++   + L  +    E +E RDHR++ +E +LF   E   G  F+  
Sbjct: 179 LGAPETLQRVSGISFPKVELLRNWEARREAAELRDHRRIGKEQELFFFHELSPGSCFFLP 238

Query: 271 KGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
           +G +++  L++++R +  +  + E+ TP +    LW+QSGHW+ YRA+MF++K       
Sbjct: 239 RGTRVYNALVAFIRAEYARRGFSEVKTPTLFSTKLWEQSGHWEHYRADMFSLKPPGTDGV 298

Query: 330 D-----------LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLH 378
           D             T ALKPMNCP H  +F H  +S+RELPVRLA+FG+++R E SGSL 
Sbjct: 299 DNSQSGHPARCPKDTLALKPMNCPAHCLMFAHRPRSWRELPVRLADFGALHRAEASGSLG 358

Query: 379 GLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD 438
           GL R+  F QDDAH+FC   Q+  E     + +  +Y   GF   +  LSTRP   +G  
Sbjct: 359 GLTRLWRFQQDDAHIFCAPHQLEAEIQGCLDFLRCVYSVLGFSFHLA-LSTRPPGFLGEP 417

Query: 439 ALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
            LWD AE +++  L+             +  G+GAFYGPK +  L DA+GR  QCGTIQ+
Sbjct: 418 RLWDQAEQVLQQALEKFGEPWD------LNPGDGAFYGPKIDVHLHDALGRPHQCGTIQL 471

Query: 499 DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVT 558
           DF LP RF+  Y         PV+IHRAV GS+ER +G++ E+  G  PLWLSP+Q +V 
Sbjct: 472 DFQLPLRFDLQYKGPAGTPECPVLIHRAVLGSVERLLGVLAESCGGKWPLWLSPLQVVVI 531

Query: 559 TITSSAVEYAQEIANLLKSHHLSIETD-FRNETINYKIREHSIKKIPIIIICGDKEASER 617
            + +   EYA+++   L++  L  + D     T++ ++R   +       + G +E S+R
Sbjct: 532 PVRTEQEEYARQVQQCLQAAGLVSDLDADSGLTLSRRVRRAQLAHYNFQFVVGQREQSQR 591

Query: 618 SIGIRRFGSTTTQKVSLLDAIPILTK--ESLPPDCQK 652
           ++ +R   +    +  L +++  L +   +  P+ ++
Sbjct: 592 TVNVRTRDNRQLGERDLAESVQRLLELQNARVPNAEE 628


>gi|291299890|ref|YP_003511168.1| threonyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728]
 gi|290569110|gb|ADD42075.1| threonyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728]
          Length = 668

 Score =  546 bits (1406), Expect = e-153,   Method: Composition-based stats.
 Identities = 246/653 (37%), Positives = 364/653 (55%), Gaps = 40/653 (6%)

Query: 18  PVHATGSD-VAESISRSLAKKAVAVAIN--GKVCDLSD-PVREGSIEIITPEDPRSLAVI 73
               T +D +AE+   +   KA+ V  +  G + DLS  P  E  +E +  + P  L V+
Sbjct: 16  AAGTTCADAIAEAGLPTTGPKAIVVVRDAEGNLRDLSWAPDAEAEVEPVAIDSPDGLNVL 75

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           RHSCAH++A+AVQ +  + ++ IGP I DGFYYDFD  +PF  D+L ++EK+MQEII   
Sbjct: 76  RHSCAHVLAQAVQDLHKDAKLGIGPPIRDGFYYDFDVAEPFHPDDLKKLEKRMQEIIKSG 135

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKE------------NVTLYRQGE--- 178
             F ++  + + A    E   E YK+ +++     E            ++T+Y   +   
Sbjct: 136 QRFSRREFASKDA-ARAELADEPYKLLLVDIKGDDEVDADEVMEVGGGDLTIYDNLDAKS 194

Query: 179 ----WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
               W DLCRGPH+ ST  +  F KLM+ A AYW G    P L R+YGTAW ++  L ++
Sbjct: 195 GDRVWGDLCRGPHLPSTRHIPAF-KLMRSAAAYWMGSEKNPQLQRVYGTAWPSRDALKEH 253

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYE 292
           L  LEE+ KRDHRKL  ++DLF   ++ GSG+  +H KG  I Q + SY+R R+    YE
Sbjct: 254 LRMLEEAAKRDHRKLGAQLDLFSFPDELGSGLPVFHPKGGIIRQEMESYLRQRQKDAGYE 313

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
            +NTP +  ++L+  SGH   Y  +MF          +   + LK MNCP H  ++    
Sbjct: 314 LVNTPHITKENLFLTSGHLPYYADSMFPPMEF-----EGAEYYLKSMNCPMHNLIYRSRG 368

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
           +SYRELP+RL+EFGSVYR E SG +HGL RVRG T DDAH++CT+EQ   E   +   ++
Sbjct: 369 RSYRELPLRLSEFGSVYRYEKSGVVHGLTRVRGLTMDDAHIYCTEEQRDEELKSLLKFVL 428

Query: 413 SIYKDFGFEKIMVKLSTR--PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
            + +D+G +   ++LSTR   +K +G    W+DA   ++ V +      +  +      G
Sbjct: 429 ELLRDYGLDDFYLELSTRGDSDKFIGDPKDWEDATETLRRVAE------ESGLELVPDPG 482

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
             AFYGPK     KDAIGR WQ  TIQ+DFN P+RF   Y  +   +  PVMIHRA+FGS
Sbjct: 483 GAAFYGPKISVQAKDAIGRTWQMSTIQIDFNQPARFELEYSAADGTRKQPVMIHRALFGS 542

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
           IERF G++ E++ G  P WL+P+QA+   I    V Y  E    L++  +  E D  ++ 
Sbjct: 543 IERFFGVLTEHYAGAFPAWLAPVQAVGIPIRDENVPYLDEFVAKLRAEGIRAEVDTSDDR 602

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  K+R   ++KIP +++ GD +    ++  R    +    V L +A+  +T 
Sbjct: 603 MQKKVRNAQLQKIPFMVLAGDTDQEAGTVSFRYRDGSQRNGVPLEEAVAHVTD 655


>gi|158336193|ref|YP_001517367.1| threonyl-tRNA synthetase [Acaryochloris marina MBIC11017]
 gi|158306434|gb|ABW28051.1| threonyl-tRNA synthetase [Acaryochloris marina MBIC11017]
          Length = 616

 Score =  546 bits (1406), Expect = e-153,   Method: Composition-based stats.
 Identities = 255/608 (41%), Positives = 363/608 (59%), Gaps = 40/608 (6%)

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P     L  +RH+CAH+MA AVQ+++PE +V IGP  E GFYYDFD++Q F+ ++L  I 
Sbjct: 11  PNSTEQLQRLRHTCAHVMAMAVQNLFPETKVTIGPTTETGFYYDFDRDQAFTPEDLDAIS 70

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE----- 178
            +M+ II  + P +++ +  ++ +   E  +E YK+EIL  IPA E +T Y  G      
Sbjct: 71  TQMRRIIKANLPIIREQVDRDQMQAELEQLQEPYKLEILAQIPAGETITRYFIGSPDTGR 130

Query: 179 ---------------------WFDLCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPM 216
                                W+DLC GPH+ STG++  K F L  VAGAYWRGD  +  
Sbjct: 131 TQHPEAEASLIEPLPVAPNEFWWDLCSGPHLNSTGELHSKAFMLESVAGAYWRGDETQAQ 190

Query: 217 LSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKI 275
           L RIYGTAW T ++L  YL+  EE+++RDHR L + + LF I    G G++FWH +G +I
Sbjct: 191 LQRIYGTAWETPKQLKAYLHQKEEAQRRDHRLLGKNLKLFSIEDNAGGGLVFWHPRGARI 250

Query: 276 FQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
            Q + +Y R+   +  YE + TP + +  LW+ SGH+D YR +MF          + + +
Sbjct: 251 RQVIETYWRQAHTQGGYELLYTPHMANLDLWKTSGHFDFYRDSMFDQMEV-----ETQAY 305

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
            +KPMNCP HV  + H L SYRE P+R AE G+VYR E SG+LHGLMRVRGFTQDDAH+F
Sbjct: 306 QIKPMNCPFHVLTYQHDLHSYREFPLRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIF 365

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDT 454
           C  +Q+ +E L + +L  ++  DFGF    V LSTRP+K VGSD +WD A   ++  LD 
Sbjct: 366 CLPDQVADEILAVLDLTETVLSDFGFRDYEVNLSTRPDKSVGSDEIWDLATQDLRTALD- 424

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH 514
                +         G GAFYGPK +  ++DAIGR WQC TIQVDFNLP RF   YV + 
Sbjct: 425 -----RKGWEYLTDEGGGAFYGPKIDLKIRDAIGRLWQCSTIQVDFNLPERFKMEYVAAD 479

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANL 574
             +  P+MIHRA+FGS+ERF GI+IEN+ G+ PLWL+P+Q  +  ++ +   YA E+   
Sbjct: 480 GTRQRPIMIHRAIFGSLERFFGILIENYAGDFPLWLAPVQIRLLVVSDAQRPYALEVLEQ 539

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           L+      E D   E +  +IR+ +++KIP++ + G KE   +++ IR   S   + + L
Sbjct: 540 LQQKGFRAEIDQTGERLGKQIRQSALEKIPVVAVVGQKEVEAQTLNIRTRHSEEQELLKL 599

Query: 635 LDAIPILT 642
            +    + 
Sbjct: 600 PELCEKMQ 607


>gi|323359943|ref|YP_004226339.1| threonyl-tRNA synthetase [Microbacterium testaceum StLB037]
 gi|323276314|dbj|BAJ76459.1| threonyl-tRNA synthetase [Microbacterium testaceum StLB037]
          Length = 666

 Score =  546 bits (1406), Expect = e-153,   Method: Composition-based stats.
 Identities = 236/644 (36%), Positives = 363/644 (56%), Gaps = 45/644 (6%)

Query: 36  KKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           +  VA+ +NG++ DL+  V  +  +E +T +    L+++RHS AH++A+AVQ + P+  +
Sbjct: 15  RSVVALRVNGELKDLATTVTADDEVEPVTIDSADGLSILRHSTAHVLAQAVQRVKPQANL 74

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            IGP + DGFYYDF  ++PF+ ++L  I+K+M+ I+  +  F+++ ++ ++AR   E   
Sbjct: 75  GIGPPVTDGFYYDFQVDEPFTPEDLKVIKKEMERIVRENQRFVRRVVTDDEARA--ELAD 132

Query: 155 EAYKVEILE------------------------SIPAKENVTLYRQGEWFDLCRGPHVRS 190
           E +K+E++                          +   +NVT   +  W DLCRGPHV  
Sbjct: 133 EPFKLELIGLKGGASTGSATEIAEGASVEVGAGELTIYDNVTRDGETAWKDLCRGPHVPG 192

Query: 191 TGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLA 250
           T  +   + L ++AGAYWRG    P L RIYGTAW T+ EL  Y + LEE+ KRDHRKL 
Sbjct: 193 TRLIGNGWDLTRIAGAYWRGSEKNPQLQRIYGTAWPTKDELRAYQHRLEEAAKRDHRKLG 252

Query: 251 REMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQS 308
           +E+DLF   ++ G G+  +H KG  I   +  YMR ++    YE +NTP +    L+  S
Sbjct: 253 KELDLFSFPDEIGPGLSVFHPKGGIIRYEIERYMRERLLASGYEVVNTPHITKGDLFMTS 312

Query: 309 GHWDSYRANMFAVKCADDT-------IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           GH   Y   M+     D+         ++ + + LKPMNCP H  +F    +SYRELP+R
Sbjct: 313 GHLQWYADGMYPPMVLDEVVDADGHVSREGQEYYLKPMNCPFHNLIFRSRGRSYRELPLR 372

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           L+EFGSVYR E SG+L GL RVRG TQDD H++ T +Q+  E     + ++   +D+G  
Sbjct: 373 LSEFGSVYRYEKSGTLSGLTRVRGMTQDDTHIYVTADQVKGELTHSLDFVLQTLRDYGLN 432

Query: 422 KIMVKLSTR---PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
              ++LST+     K +G D+LW +A   ++ V +         +      G  AFYGPK
Sbjct: 433 DFYLELSTKEEGNPKFIGDDSLWVEATETLREVAEASG------LELVPDPGGAAFYGPK 486

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
                +DAIGR WQ  TIQ+DFN P RF   Y     EK  PVMIHRA+FGS+ERF  I+
Sbjct: 487 ISVQARDAIGRTWQMSTIQLDFNQPERFELEYTGPDGEKHRPVMIHRALFGSVERFFAIL 546

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           +E++ G  P+WLSP+Q +   + +   +Y Q I   LKS  +  E D  ++ +  KIR H
Sbjct: 547 LEHYAGAFPVWLSPVQVVAVPVAAEYGDYLQGIVADLKSKGVRAEADHSDDRMQKKIRTH 606

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           + +K+P+++I G+++ S  ++  R    T    + + +A+  +T
Sbjct: 607 TTQKVPLMLIAGEQDRSNGTVSFRFRDGTQLNGIPVDEAVARIT 650


>gi|295396075|ref|ZP_06806258.1| threonine--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030]
 gi|294971016|gb|EFG46908.1| threonine--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030]
          Length = 667

 Score =  546 bits (1406), Expect = e-153,   Method: Composition-based stats.
 Identities = 239/673 (35%), Positives = 363/673 (53%), Gaps = 47/673 (6%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           +DI +T  DG   +F    T ++          K  +A+ +NG   DL   +  G ++E 
Sbjct: 2   ADI-VTL-DGKNIDFEDGMTATEFFAD-----RKDVIAIRLNGAPADLDRELHAGDTVEP 54

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           I   +P  L ++RHSCAH++A+AVQ ++P  ++ IGP I DGFYYDF  E+PF+ ++L  
Sbjct: 55  ILISEPDGLDILRHSCAHVVAQAVQELYPGSKLGIGPYITDGFYYDFQVEEPFTPEDLKA 114

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIP----------AKENV 171
           IEKK Q I+     F +  +  ++A        E +K+E+++                 +
Sbjct: 115 IEKKAQRIVKEGQTFHRVVVDEDEAIRR--EANEPFKLELIQDKGKGAEGASVEVGGSEL 172

Query: 172 TLYRQGE------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAW 225
           T+Y          W DLCRGPH+ ST  +   F + + + AYWRGD +   L R+YGTAW
Sbjct: 173 TVYENRNRKGEVVWQDLCRGPHLPSTKLIGNGFAVTRASAAYWRGDQDNASLQRVYGTAW 232

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR 284
            ++ +L  Y   + E+E+RDHR+L  E+DLF   ++ GSG+  +H KG  I + +  Y+R
Sbjct: 233 ASKDDLKAYQVRIAEAERRDHRRLGAELDLFSFPDELGSGLPVFHPKGGVIKREMEDYVR 292

Query: 285 -RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT-------IKDLRTFAL 336
            R I++ +E + TP +  + L+  SGH   Y  NMF     D+        IK  + + L
Sbjct: 293 ARHIEEGFEYVGTPHISKEALYYTSGHLPYYGENMFPAMQVDEQRDENGEIIKQGQPYRL 352

Query: 337 KPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT 396
           K MNCP H  ++    +SYR+LP+RL EFG+VYRNE SG +HGL RVR  TQDD+H +  
Sbjct: 353 KAMNCPMHNLIYRSRGRSYRDLPLRLFEFGTVYRNEASGVVHGLTRVRALTQDDSHSYVA 412

Query: 397 KEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP------EKRVGSDALWDDAENIMKG 450
            E   +E   + + ++S+ +DFG +   ++LSTR        K +GSD  WD+A   ++ 
Sbjct: 413 VEDAASEIKHLLDFMLSLLRDFGLDDFYLELSTRDAVGKKANKFIGSDEQWDEATRTLEE 472

Query: 451 VLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFY 510
           V           +      G  AFYGPK     +DAIGR WQ  T+Q+DFN P RF+  Y
Sbjct: 473 VARATG------LELVPDPGGAAFYGPKISVQARDAIGRTWQMSTVQLDFNQPERFDLEY 526

Query: 511 VNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQE 570
             +   +  PVMIH A FGSIERF+G++ E++ G  P+WLSP+QAI+  +    + Y +E
Sbjct: 527 QAADGSRKRPVMIHSAKFGSIERFLGVLTEHYAGAFPVWLSPVQAIMVPVADEFLPYVEE 586

Query: 571 IANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
           IA  LK+H + +E D   +    KIR  S  K+P  +I G ++    ++  R    +   
Sbjct: 587 IAQKLKAHGIRVEIDDSTDRFPKKIRNASKSKVPYTLIAGGEDRDAHAVSFRFRDGSQEN 646

Query: 631 KVSLLDAIPILTK 643
            V +  A+  +  
Sbjct: 647 GVPVDQAVERIVD 659


>gi|284166054|ref|YP_003404333.1| threonyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511]
 gi|284015709|gb|ADB61660.1| threonyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511]
          Length = 649

 Score =  546 bits (1406), Expect = e-153,   Method: Composition-based stats.
 Identities = 257/646 (39%), Positives = 369/646 (57%), Gaps = 23/646 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
             I +  PDGS       AT  D A  I   L +  VA  ++G++    +PV +G  +EI
Sbjct: 10  EQITVVLPDGSELEVASDATVEDCAYEIGPGLGRDTVAGKLDGELVAKEEPVYDGVELEI 69

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +T      L V+RHS AH +A+AV+  + +V +AIGP  ++GFYYDFD       ++LA 
Sbjct: 70  VTDGSEEYLEVMRHSAAHCLAQAVERHYDDVDLAIGPPTDEGFYYDFDNLDVD-EEDLAA 128

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESI-PAKENVTLYRQGEWF 180
           +E +++ IIA D    ++ +S E+A E      E YK+E+LE      + VT Y+QGEW 
Sbjct: 129 LEDEIEAIIAEDYEIEREDVSIEEAEERLA--GEPYKLELLEEFADENDTVTFYKQGEWE 186

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLC GPHV STG++    +L+++AGAYWRGD    M +RIYGTA+  + +L  +L   +E
Sbjct: 187 DLCAGPHVDSTGEIGVV-ELLEIAGAYWRGDEENTMQTRIYGTAFEDESDLEDFLERKQE 245

Query: 241 SEKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           +EKRDHR++  EM+LF I +  G G+  +H  G  + + L  ++        Y+ + TP 
Sbjct: 246 AEKRDHRRIGNEMNLFSIQDVTGPGLPLYHPPGKTVLKELEDFVEDLNKDAGYDYVETPH 305

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    LW +SGH+++Y+ +MF     DD       F LKPMNCPGH A+F     SYR+L
Sbjct: 306 VFKTDLWHRSGHYENYQDDMFIFDVGDD------EFGLKPMNCPGHAAIFQDQSWSYRDL 359

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R AE G VYR E  G L GL RV  FT DD H+F   +Q+  E  +I ++I  + + F
Sbjct: 360 PIRYAENGKVYRKEQRGELSGLSRVWAFTIDDGHLFIRPDQIRQEVEEIMDMITDVLETF 419

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
             E  M  L+TRPEK VGSD +WD AE  ++ VL+   +      +  V  G+GAFYGPK
Sbjct: 420 DLEYEMA-LATRPEKSVGSDEIWDRAEEQLENVLENRAH------DYEVEEGDGAFYGPK 472

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++  +DAIGR W   T+Q+DFN+P RF+  YV   +E+  PVMIHRA++GS ERF  ++
Sbjct: 473 IDFAFEDAIGRSWDGPTVQLDFNMPERFDLNYVGEDNEEHRPVMIHRALYGSYERFFMML 532

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+++G  PLWL+P Q  V  I+   + YA  +AN        +E D R+ T+  KIR  
Sbjct: 533 IEHYEGRFPLWLAPEQVRVLPISDDNLGYAHRVANEFDD--FRVEVDGRDSTLERKIRAA 590

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
              ++P  II GD E  + +I +R         V + D    L  E
Sbjct: 591 HDDRVPYQIIVGDNEEDDGNISVRDRFEDQEYDVEIEDFKQHLEAE 636


>gi|224541524|ref|ZP_03682063.1| hypothetical protein CATMIT_00694 [Catenibacterium mitsuokai DSM
           15897]
 gi|224525561|gb|EEF94666.1| hypothetical protein CATMIT_00694 [Catenibacterium mitsuokai DSM
           15897]
          Length = 585

 Score =  545 bits (1405), Expect = e-153,   Method: Composition-based stats.
 Identities = 226/592 (38%), Positives = 355/592 (59%), Gaps = 26/592 (4%)

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDEL 119
            +  +D   L  + HSCAH++A+AV+ ++P+ +  +GP++E+GFYYD D  +Q  S D+L
Sbjct: 4   FLNDKD---LNTLNHSCAHVLAQAVKHLYPQAKFWVGPVVEEGFYYDIDLGDQTISDDDL 60

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IEK+M++I       ++  +S E+A E  E K + YK++++  +     +T Y QG++
Sbjct: 61  PKIEKEMKKICKDGKRIVRHEVSKEEALE--EFKDDEYKLDLINGL-EDGTITTYSQGDF 117

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV +    K F KL+K +GAYW+GD N  +L RIYG  + T++EL  +L  LE
Sbjct: 118 TDLCRGPHVETVKLCKNF-KLIKHSGAYWKGDKNNKVLQRIYGVCFPTKEELEAHLQLLE 176

Query: 240 ESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTP 297
           E+++RDHRKL +E+ +F  A+    G+  W   G+ + + L  Y M ++++  YE + TP
Sbjct: 177 EAKERDHRKLGKELGIFMFADIVGKGLPMWLPNGFTVRRLLSDYIMNKELELGYEHVMTP 236

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  L+++SGHW  Y+ +MF     DD       + L+PMNCP H+ ++   L SYR+
Sbjct: 237 SLGNVKLYKKSGHWAHYKDDMFPAMELDDEA-----YVLRPMNCPHHMVMYKSTLHSYRD 291

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LPVR+AE  + +R E SG+L G+ R R FTQ+D+H+FC  +Q+  E   + +LI+ +YKD
Sbjct: 292 LPVRIAEIANDFRFEASGALTGIERARAFTQNDSHIFCRPDQIAQEFKNVAHLILDVYKD 351

Query: 418 FGFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           FGF+    +LS R +       G+D LW+ +EN ++ VL  +       +      GE A
Sbjct: 352 FGFKDYSFRLSLRDKNNKEKYFGNDELWEKSENELREVLKEM------DVEFYEAEGEAA 405

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  +K A+G D    TIQ+D+ LP RF   YV+ + +K  PV+IHRA+ GS++R
Sbjct: 406 FYGPKLDVQVKSALGHDVTLSTIQLDYQLPERFELTYVDENGDKVRPVVIHRAILGSLDR 465

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
           FI  ++E  KGNLPLWL+P Q  V  +      EYA+E+   L+  H  +  D R+E + 
Sbjct: 466 FIAFLLEETKGNLPLWLAPTQVQVIPVKLEYHDEYAKEVVAKLRKAHFRVNNDNRDEKLG 525

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           Y+IRE  +KKIP  ++ GD E    ++  R+ G      V+  + + +L  E
Sbjct: 526 YRIREAQLKKIPYQLVLGDNERDNGTVTYRKHGEKKQTTVTFDEFVELLNTE 577


>gi|148273002|ref|YP_001222563.1| threonyl-tRNA synthetase [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|147830932|emb|CAN01876.1| thrS [Clavibacter michiganensis subsp. michiganensis NCPPB 382]
          Length = 684

 Score =  545 bits (1405), Expect = e-153,   Method: Composition-based stats.
 Identities = 245/664 (36%), Positives = 368/664 (55%), Gaps = 47/664 (7%)

Query: 12  GSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI-EIITPEDPRSL 70
           G         TG  +         +  VA+ ++G++ DL+  V  G + E +  + P  L
Sbjct: 20  GQPVEVTEAGTGFTLFTD------RAVVAMRVDGELKDLAADVAPGDVVEPVRIDSPDGL 73

Query: 71  AVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEII 130
           +++RHS AH+MA+AVQ I PE ++ IGP + DGFY+DFD  +PF+ ++L  I K M+ I+
Sbjct: 74  SILRHSAAHVMAQAVQQINPEAKLGIGPPVTDGFYFDFDVAEPFTPEDLKAISKNMERIV 133

Query: 131 ARDSPFLKQYLSHEKARELFESKKEAYKVEIL-------ESIPAKEN--------VTLYR 175
            +   F ++ ++ E+AREL     E YK+E++       E +             +T+Y 
Sbjct: 134 RQGQRFTRRVVTEEEARELMA--DEPYKLELIGLKGGSSEELGEDGESVEVGGAELTVYE 191

Query: 176 QGE-------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQ 228
             +       W DLCRGPH+ ST  V   + L +VA AYWRG    P L RIYGTAW T+
Sbjct: 192 NVDGKTGEVFWRDLCRGPHLPSTRMVGNGWALSRVAAAYWRGSEKNPQLQRIYGTAWPTK 251

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-K 286
            EL  Y   +EE+ KRDHR+L  E+DLF   ++ GSG+  +H KG  I + +  Y RR  
Sbjct: 252 DELRAYQGRIEEALKRDHRRLGAELDLFSFPDEIGSGLAVFHPKGGIIRREMEDYSRRRH 311

Query: 287 IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD-------LRTFALKPM 339
               YE + +P +   +L++ SGH D Y+  MF     D+   D          + LKPM
Sbjct: 312 ETAGYEFVYSPHITKSNLFETSGHLDFYKDGMFPAMHLDEARNDEGEITRQGADYYLKPM 371

Query: 340 NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQ 399
           NCP HV ++    +SYRELP+RL EFG+VYRNE SG +HGL RVRG TQDDAH+F T+E+
Sbjct: 372 NCPMHVLIYRSRQRSYRELPLRLFEFGTVYRNEKSGVIHGLTRVRGMTQDDAHIFTTRER 431

Query: 400 MFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDTIKNS 458
           M +E       ++S+ +D+G +   ++LST+  +  VGSD +W++A   ++ V       
Sbjct: 432 MADELKGTLEFVLSLLRDYGLDDFYLELSTKDPEKFVGSDEVWEEATETLRQVAVDTG-- 489

Query: 459 SQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC 518
               +         AFYGPK     +DAIGR WQ  TIQ+DFNLP RF   Y  +   + 
Sbjct: 490 ----LELVPDPAGAAFYGPKISVQARDAIGRTWQMSTIQLDFNLPERFGLEYTANDGTRK 545

Query: 519 HPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSH 578
            PVMIHRA+FGSIERF G++ E++ G  P+WLSP+Q +   +     EY   + + L++ 
Sbjct: 546 QPVMIHRALFGSIERFFGVLTEHYAGAFPVWLSPVQVVGIPVAEDYEEYLGGVLDRLRAE 605

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
            + ++ D  ++ +  KIR H+  ++P  +I G+ + +  S+  R    T    V + +A+
Sbjct: 606 GVRVQLDTSDDRMPKKIRTHTKARVPYQLIAGEDDRAAGSVSFRFRDGTQVNGVPVAEAV 665

Query: 639 PILT 642
             +T
Sbjct: 666 ERIT 669


>gi|331697398|ref|YP_004333637.1| threonyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190]
 gi|326952087|gb|AEA25784.1| threonyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190]
          Length = 682

 Score =  545 bits (1405), Expect = e-153,   Method: Composition-based stats.
 Identities = 243/646 (37%), Positives = 364/646 (56%), Gaps = 40/646 (6%)

Query: 17  FPVHAT-GSDVAESISRSLAKKAVAVA--INGKVCDLSD-PVREGSIEIITPEDPRSLAV 72
            P   T G+ V E+   +   +AV V    +G++ DL+  P  +  +E +  +     +V
Sbjct: 15  VPAGTTAGAAVREAGLPANGPEAVVVVRDPDGRLRDLAWAPEADVDVEAVPADSEDGRSV 74

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIAR 132
           IRHS AH++A+AVQ + PE ++ IGP I DGFYYDFD   PF+ D+L ++E  M++II  
Sbjct: 75  IRHSAAHVLAQAVQQLHPEAKLGIGPPIRDGFYYDFDVATPFTPDDLKKLESAMKKIIKA 134

Query: 133 DSPFLKQYL-SHEKARELFESKKEAYKVEILE---------SIPAKENVTLYR------- 175
              F ++     ++AR+  E   E YK+E+++          I A   +T+Y        
Sbjct: 135 GQRFSRRRFADKDEARK--ELADEPYKLELIDLKGPEEDVVEIDASGELTIYDNVHAHTG 192

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
           +  W DLCRGPH+ +T  +  F    + A AYWRGD   P L RIYGTAW +Q+ L  YL
Sbjct: 193 ETVWSDLCRGPHLPTTRYIPAFSLT-RTAAAYWRGDEKNPQLQRIYGTAWESQEALDAYL 251

Query: 236 YFLEESEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEE 293
             + E+E+RDHR+L  E+DLF    + GSG+  +H KG  + + L  Y RR   +  YE 
Sbjct: 252 ERVAEAERRDHRRLGAELDLFSFPDQIGSGLAVFHPKGGIVRKELEDYSRRRHEQAGYEF 311

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTI-------KDLRTFALKPMNCPGHVA 346
           +NTP +    L++ SGH + Y   M+     D+         K  + + LKPMNCP H  
Sbjct: 312 VNTPHITKGQLFRTSGHLEWYEEGMYPGMILDEERDADGNVRKPGQDYYLKPMNCPMHNL 371

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           +F+   +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDDAH++CT+EQM  E   
Sbjct: 372 IFDARGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYCTEEQMEGEIAS 431

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKR-VGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
           +   ++ + +D+G +   ++LSTR  ++ +GSD  W+ A N+++ V +       D    
Sbjct: 432 LLQFVLELLRDYGLDDFYLELSTRNPEKSIGSDEAWERATNVLRKVAEETGLHLVD---- 487

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
               G  AFY PK     KDAIGR WQ  TIQVD  LP RF+  Y  S   +  PVMIHR
Sbjct: 488 --DPGGAAFYAPKISVQAKDAIGRTWQMSTIQVDLMLPDRFDLEYTASDGSRKRPVMIHR 545

Query: 526 AVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD 585
           A+FGSIERF  +++E++ G  P WL+P+Q +   +T    EY +++A  L+   + +E D
Sbjct: 546 ALFGSIERFFAVLLEHYAGAFPAWLAPVQVVGIPVTDDQREYVEQVAATLRERGVRVEVD 605

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
             ++ +  KIR H+++K+P +++ G ++    ++  R    T    
Sbjct: 606 SGDDRMQKKIRTHTLQKVPFMLVVGARDVEAGAVSFRFRDGTQVNG 651


>gi|22299745|ref|NP_682992.1| threonyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
 gi|73919834|sp|Q8DGW0|SYT_THEEB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|22295929|dbj|BAC09754.1| threonyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
          Length = 605

 Score =  545 bits (1405), Expect = e-153,   Method: Composition-based stats.
 Identities = 240/592 (40%), Positives = 352/592 (59%), Gaps = 16/592 (2%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           I +    +   L  IRH+ +HI+A AVQ ++P+ QV IGP IE+GFYYDFD  +PFS  +
Sbjct: 9   IHLPKTSESERLKRIRHTTSHILAMAVQKLFPKAQVTIGPWIENGFYYDFDHPEPFSEKD 68

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L  IEK+M +II R  P +++ ++ E+A     +  E YK+EIL+ +  +E +T+Y  G+
Sbjct: 69  LRLIEKEMVKIIKRKLPVIREEVTREEAERRIRALGEPYKLEILQDL--EEPITIYHLGD 126

Query: 179 -WFDLCRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
            W+DLC GPHV +TG++  K   L  VAGAYWRGD  +  L RIYGTAW T ++L +Y  
Sbjct: 127 EWWDLCAGPHVENTGEIDPKAIALESVAGAYWRGDETKAQLQRIYGTAWETPEQLAEYKR 186

Query: 237 FLEESEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEI 294
             EE+ +RDHRK+ +E+ LF      G G+  W  +G  +  TL  +++  ++K  Y  +
Sbjct: 187 RKEEALRRDHRKVGKELGLFIFADPVGPGLPLWTPRGTVLRSTLEDFLKKEQLKRGYLPV 246

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL-RTFALKPMNCPGHVAVFNHGLK 353
            TP +    L++ SGHW  Y+ +MF +   D       + F LKPMNCP H+ ++   L+
Sbjct: 247 VTPHIARVDLFKTSGHWQKYKEDMFPLMAEDAEAAAHEQGFVLKPMNCPFHIQIYKSELR 306

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYR+LP+RLAEFG+VYR E SG L GL RVRGFT DD+H+F T EQ+  E L + +LI++
Sbjct: 307 SYRDLPLRLAEFGTVYRYEQSGELGGLTRVRGFTVDDSHLFVTPEQLDAEFLNVVDLILT 366

Query: 414 IYKDFGFEKIMVKLSTRPEK---RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
           +++     K   +LS R  K    +GSD  W  AE  ++  ++ +       I      G
Sbjct: 367 VFRCLRLNKFKARLSFRDPKSDKYIGSDEAWSKAEAAIQRAVEQLGMEHFLGI------G 420

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           E AFYGPK ++I +DA+GR+WQ GT+QVD+NLP RF+  YV   + +  PVMIHRA FGS
Sbjct: 421 EAAFYGPKLDFIFEDALGREWQLGTVQVDYNLPERFDLEYVAEDNTRRRPVMIHRAPFGS 480

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
           +ER IGI+IE + G+ P WL+P Q  +  +      YA+ +A  L+   + +  D   + 
Sbjct: 481 LERLIGILIEEYAGDFPFWLAPEQVRLLPVGDEQRPYAERVAAQLRERGVRVSVDRSGDR 540

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +  +IR    +KIP++ I G KE    ++ IR   +      +L   I  LT
Sbjct: 541 LGKQIRNAETQKIPVMGIIGAKEVEHETVSIRTRAAGDVGTFALEHLIAKLT 592


>gi|39942942|ref|XP_361008.1| conserved hypothetical protein [Magnaporthe oryzae 70-15]
 gi|58257459|gb|AAW69351.1| threonyl-tRNA synthetase-like protein [Magnaporthe grisea]
 gi|145009886|gb|EDJ94542.1| conserved hypothetical protein [Magnaporthe oryzae 70-15]
          Length = 812

 Score =  545 bits (1405), Expect = e-153,   Method: Composition-based stats.
 Identities = 237/714 (33%), Positives = 364/714 (50%), Gaps = 85/714 (11%)

Query: 3   SDIKLTFPDGSIKN-FPVHATGSDVAESISRSLAKKAVAVAING---KVCDLSDPVR-EG 57
             I +T PDGSIKN      T +D+A+ IS SL K+ V   ++G   ++ DL  P+    
Sbjct: 86  EPITITMPDGSIKNGTAWETTPADIAKGISNSLFKRTVVARLDGDKEQLWDLERPLERSC 145

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ--PFS 115
            +E++   DP+   V  HS AHI+ EA +  +    + IGP +++GFYY+          
Sbjct: 146 KLELLDFSDPQGQFVFWHSSAHILGEAAERRF-GCSLCIGPPVDNGFYYEMALPDGAAVQ 204

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES-IPAKENVTLY 174
           S +   +E  + +I+     F +  LS E   E+F+     YK  I++  I      T+Y
Sbjct: 205 SSDWKPLETLVSKIVKEKQKFERLVLSKEDLLEMFKY--NKYKQHIIKDKIADGTKTTVY 262

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
           R G   DLCRGPHV  TG+++ F  +MK + +Y+ GD +   L RIYG ++ T+++LT+Y
Sbjct: 263 RNGPLIDLCRGPHVPDTGRIEAF-AIMKNSASYFLGDKDNDSLQRIYGVSFPTKKQLTEY 321

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEE 293
             FLEE+ KRDHR++ ++ +LF   +   G   W   G +I+ TL+SY+R    + +YEE
Sbjct: 322 QKFLEEAAKRDHRRIGKDQELFFFHDYSPGSAMWLPHGTRIYNTLLSYIREIYWEKNYEE 381

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           + TP + +  LW+QSGHW  Y+ +MF +K   DT      F LKPMNCPGH  +F H  +
Sbjct: 382 VITPNIYNADLWKQSGHWQFYKDDMFVIKDEKDT------FGLKPMNCPGHALMFAHRER 435

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           S+RELP R+A+FG ++RNE SG+L GL RVR F QDDAH+FC ++Q+ +E L + + +  
Sbjct: 436 SHRELPWRVADFGVLHRNEASGALSGLTRVRRFQQDDAHIFCREDQIKDEILDLFDFLRK 495

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           +Y   G    + +LSTRPEK +G+   WD AE  ++  LD    +S+  +   +  G+GA
Sbjct: 496 MYTVMGLTFKL-RLSTRPEKYMGAIETWDKAEESLRQALDEF-AASEGGVAWELNAGDGA 553

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH-----------PVM 522
           FYGPK +  + D + R+WQC TIQ+DF  P  FN  Y+                   P +
Sbjct: 554 FYGPKIDIAIMDCLNREWQCATIQLDFVQPQNFNLEYMAGEDAAETKAKAEGAKITAPKV 613

Query: 523 IHRAVFGSIE-----------------------------------------RFIGIMIEN 541
             +     I+                                         R +   IE 
Sbjct: 614 KVKDPQAIIDSAAAARGETVVEPAGVEGDKKEKEKVIKKLSPGCARPVMIHRAMAGSIER 673

Query: 542 FKG--------NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           F G          PLWLSP Q +V  +     +YA+E+ ++ K   + ++ D    T+  
Sbjct: 674 FTGILCEHYAGKWPLWLSPRQILVVPVGKGFYDYAEEVRSIFKKAKMFVDVDTSGNTLMK 733

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK----VSLLDAIPILTK 643
           KIR   + +   I + G +E + R + +R      TQ     ++L +A+  L K
Sbjct: 734 KIRTGQLAQYNFIFVVGAEEMNGRQVNVRNRDDPATQDRGQPIALEEALEKLAK 787


>gi|296139628|ref|YP_003646871.1| threonyl-tRNA synthetase [Tsukamurella paurometabola DSM 20162]
 gi|296027762|gb|ADG78532.1| threonyl-tRNA synthetase [Tsukamurella paurometabola DSM 20162]
          Length = 677

 Score =  545 bits (1405), Expect = e-153,   Method: Composition-based stats.
 Identities = 242/635 (38%), Positives = 352/635 (55%), Gaps = 38/635 (5%)

Query: 38  AVAVAINGKVCDLSD-PVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAI 96
            V    +G + DLS  P  +  +E +         VIRHS AH++A+AVQ  +P  ++ I
Sbjct: 31  VVVKTTDGTLKDLSWVPETDTEVEAVAANTDDGRNVIRHSAAHVLAQAVQDGFPGTKLGI 90

Query: 97  GPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYL-SHEKARELFESKKE 155
           GP I DGFYYDFD  +PF+ ++L  +EKKM++II     F ++   S ++AR   E   E
Sbjct: 91  GPYITDGFYYDFDVAEPFTPEDLKNLEKKMKQIIKAGQKFSRRVYASKDEARA--ELAGE 148

Query: 156 AYKVEILESIPAKENVTLYRQGE-----------------WFDLCRGPHVRSTGQVKKFF 198
            YK+E+++   A ++  +   G                  W DLCRGPHV +T +     
Sbjct: 149 PYKLELIDDKGAADDSEVMEVGGAELTAYDNLNPRTGERIWGDLCRGPHVPTT-KYIPAV 207

Query: 199 KLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI 258
           KL + + AYWRGD N   L RIYGTAW + +   +YL  L E+EKRDHR+L  E+DLF  
Sbjct: 208 KLTRSSAAYWRGDQNNADLQRIYGTAWESPEAQDEYLELLAEAEKRDHRRLGAELDLFSF 267

Query: 259 AED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
            +  GSG+  +H KG  I + L  Y R R +   YE +NTP +    L++ SGH D Y+ 
Sbjct: 268 PDALGSGLPVFHPKGGIIRKELEEYSRQRHVDAGYEFVNTPHLTKSALYEVSGHLDWYKD 327

Query: 317 NMFAVKCADDTIKD-------LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVY 369
            MF     D    D        + + +KPMNCP H  +F+   +SYRELP+RL EFGSVY
Sbjct: 328 GMFPAMHLDAEYDDEGNVTKPGQDYYVKPMNCPMHNLIFDARGRSYRELPLRLFEFGSVY 387

Query: 370 RNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLS- 428
           R E SG +HGL RVRG TQDDAH++CTKEQM  E       ++S+ KD+G +   ++LS 
Sbjct: 388 RYEKSGVIHGLTRVRGMTQDDAHIYCTKEQMHGELTTTLKFVLSLLKDYGLDDFYLELST 447

Query: 429 TRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIG 488
             PEK VG D +W++A   ++ V +         ++     G  AFYGPK     KDA+G
Sbjct: 448 KNPEKYVGDDDVWEEATKTLQQVAEASG------LDLVPDPGGAAFYGPKISVQAKDALG 501

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPL 548
           R WQ  TIQ+DFNLP RF   Y      K  PVMIHRA+FGSIERF G++ E++ G  P 
Sbjct: 502 RTWQMSTIQLDFNLPERFELEYTAPDGTKQRPVMIHRALFGSIERFFGVLTEHYAGAFPA 561

Query: 549 WLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIII 608
           WL+P Q +   +     ++ + +   L++  +    D  ++ +  KIR H+ +K+P +++
Sbjct: 562 WLAPEQVVGIPVAEQFGDHLETVIRKLRAEGIRAHVDHSDDRMQKKIRNHTTQKVPFMLL 621

Query: 609 CGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            G+++    ++  R    T   +V + DA+  + +
Sbjct: 622 AGERDREAGAVSFRFRDGTQVNEVPVDDAVQRIVE 656


>gi|146100812|ref|XP_001468953.1| threonyl-tRNA synthetase [Leishmania infantum]
 gi|134073322|emb|CAM72048.1| putative threonyl-tRNA synthetase [Leishmania infantum JPCM5]
          Length = 788

 Score =  545 bits (1405), Expect = e-153,   Method: Composition-based stats.
 Identities = 224/746 (30%), Positives = 361/746 (48%), Gaps = 113/746 (15%)

Query: 1   MPSDIKLTFPDGSIKNFPVHAT-GSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGS 58
           M + IK++ PDG + +     T   D+A+ +S SL  K +   +N  + DL+ P   +  
Sbjct: 44  MKAPIKVSLPDGKVMDAESWVTCPLDIAKRLSNSLPDKVIVARVNEALWDLTRPFEADCQ 103

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSD 117
           +E++  ++  +  V  HS +H++  A++ I+ + ++++GP +E+G F+Y+    +P S  
Sbjct: 104 LELLDWDEKDAREVFWHSSSHVLGYALERIF-DTKLSVGPALEEGGFFYEGLTNRPVSES 162

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +   IE  MQE++ +  P+ +  +S E A  LF   +   K+ +   +P   + T+YR G
Sbjct: 163 DYKAIESAMQELVKQKMPYQRLEVSKEDALRLFGYTEFKSKI-LASKVPDGGSCTVYRCG 221

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
              D CRGPH+  TG+VK F  + K + +Y  G +   +L R+YG ++     LT++   
Sbjct: 222 MLIDPCRGPHLPDTGRVKAF-AVTKNSSSYLEGKAENEVLQRVYGISFPKNPMLTEWKTI 280

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
            EE+ KRDHR + R+ +LF+  E   G  FW   G +I+ TL+ ++R+K +   ++E+ +
Sbjct: 281 QEEAAKRDHRVIGRQQNLFNFHEVSPGSAFWLPHGARIYNTLVEFLRKKYRRCGFQEVIS 340

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +    LW  SGHW+ Y  NMF  KC      +   F LKPMNCPGH  +F     SY+
Sbjct: 341 PNMYSSKLWMVSGHWEKYADNMFCTKC------EKEDFGLKPMNCPGHCIMFASQPHSYK 394

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ELP+R A+FG ++RNE SG+L GL RVR F QDDAH+FC  +Q+ +E       +  +Y 
Sbjct: 395 ELPIRYADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCRMDQITDEMEGQMQFLSDVYG 454

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTI--------------------- 455
             GF K     STRP  ++GS+ALWD +E+ ++  L+                       
Sbjct: 455 VLGF-KFYFYHSTRPANKLGSEALWDQSESYLRTALNRFCGIPEELPDPLHPDQRFHYDG 513

Query: 456 ------------------------KNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDW 491
                                   K  +          G+GAFYGPK + +++DA+ R  
Sbjct: 514 KPDSVKKMKALMKKAERCEDPNAWKGPTNGGDGWIENAGDGAFYGPKIDIVVEDALRRRH 573

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM-----------------------IHRAVF 528
           QC TIQ+DFNLPSRF   Y    +EK    +                       + +   
Sbjct: 574 QCATIQLDFNLPSRFGLKYTLPAAEKDETTVSPTEKQKHADPALTASSPAVEDCVSKPKP 633

Query: 529 G-------------------------------SIERFIGIMIENFKGNLPLWLSPIQAIV 557
           G                               S+ER I I+ E+F G+ P WLSP Q +V
Sbjct: 634 GTYEAAVRDLGIDLELDANQARPVMIHRAILGSLERSIAILCEHFGGDWPFWLSPRQVMV 693

Query: 558 TTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASER 617
             +++S  EY+Q++ + +       + D    T++ KIR     +   I++ G KE    
Sbjct: 694 VPVSASNYEYSQQVRDTMHDAGFHADVDNGAATLDKKIRNAEKARYNFILVVGQKEQDAT 753

Query: 618 SIGIRRFGSTTTQKVSLLDAIPILTK 643
           ++ IR  G       SL++A+  L +
Sbjct: 754 AVNIRARGEKRLGNKSLVEAVQWLKE 779


>gi|108799209|ref|YP_639406.1| threonyl-tRNA synthetase [Mycobacterium sp. MCS]
 gi|119868325|ref|YP_938277.1| threonyl-tRNA synthetase [Mycobacterium sp. KMS]
 gi|126434867|ref|YP_001070558.1| threonyl-tRNA synthetase [Mycobacterium sp. JLS]
 gi|122977050|sp|Q1B9T4|SYT_MYCSS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|166225465|sp|A3PYU0|SYT_MYCSJ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|166225466|sp|A1UF79|SYT_MYCSK RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|108769628|gb|ABG08350.1| Ser-tRNA(Thr) hydrolase [Mycobacterium sp. MCS]
 gi|119694414|gb|ABL91487.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Mycobacterium
           sp. KMS]
 gi|126234667|gb|ABN98067.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Mycobacterium
           sp. JLS]
          Length = 684

 Score =  545 bits (1405), Expect = e-153,   Method: Composition-based stats.
 Identities = 232/639 (36%), Positives = 361/639 (56%), Gaps = 35/639 (5%)

Query: 31  SRSLAKKAVAVA-INGKVCDLS-DPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSI 88
            R      V V   +G++ DLS  P  +  +  +  +     +VIRHS AH++A+AVQ +
Sbjct: 32  GRGAPDAIVVVREADGRLRDLSWTPDADVEVVPVPADSEDGRSVIRHSAAHVLAQAVQDL 91

Query: 89  WPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE 148
           +PE ++ IGP I DGFYYDFD  + F+ ++L  +EKKM++I+     F ++    E+   
Sbjct: 92  FPEAKLGIGPPITDGFYYDFDVPRAFTPEDLEALEKKMRKIVKDGQLFERRVYESEE-EA 150

Query: 149 LFESKKEAYKVEILESIPAKENVTLY---------------RQGEWFDLCRGPHVRSTGQ 193
             E   E YK+E+++       V                  R+  W DLCRGPH+ +T  
Sbjct: 151 RRELANEPYKLELVDDKSGDPEVMEVGGDELTAYDNLNPRTRERVWGDLCRGPHIPTTKY 210

Query: 194 VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREM 253
           +  F KL + + AYWRGD     L RIYGTAW +Q+ L ++L  +EE+++RDHRKL  E+
Sbjct: 211 IPAF-KLTRSSAAYWRGDQTNASLQRIYGTAWESQEALDRHLELIEEAQRRDHRKLGVEL 269

Query: 254 DLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHW 311
           DLF   ++ GSG+  +H KG  + + L  Y R + ++  YE +NTP +  + L+  SGH 
Sbjct: 270 DLFSFPDELGSGLPVFHPKGGIVRKELEDYSRAKHLQAGYEFVNTPHITKEQLYVTSGHL 329

Query: 312 DSYRANMFAVKCADDT-------IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           + Y   MF     D          K  + + LKPMNCP H  ++    +SYRELP+RL E
Sbjct: 330 EWYADGMFPAMHIDAEYDADGAVRKPGQNYYLKPMNCPMHHLIYRSRGRSYRELPLRLFE 389

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FGSVYR E SG +HGL RVRG TQDDAH++ T+EQM +E   +   ++ +  D+G ++  
Sbjct: 390 FGSVYRYEKSGVVHGLTRVRGMTQDDAHIYATREQMRDELTSLLQFVLDLLSDYGLDEYY 449

Query: 425 VKLSTRPEK-RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           ++LST+     VGSD +WD+A   ++ V +         ++     G  AFYGPK    +
Sbjct: 450 LELSTKDPDKYVGSDEIWDEATETLREVAEASG------LDLVPDPGGAAFYGPKISVQV 503

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           KDA+GR+WQ  TIQ+DFN+P RF   Y  +   +  PV+IHRA+FGSIERF G++ E++ 
Sbjct: 504 KDALGRNWQMSTIQLDFNMPERFELEYTAADGSRQRPVLIHRALFGSIERFFGVLTEHYA 563

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P+Q +   +  + + Y +++A  L+S  + +E D  ++ +  KI  H+ +++
Sbjct: 564 GAFPAWLAPVQVVGIPVADAHIPYLEDVAAQLRSRGVRVEIDGSDDRMAKKIVNHTNQRV 623

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           P +++ GDK+ +  ++  R    T    V   +A+  + 
Sbjct: 624 PFMLLAGDKDVAAGAVSFRFGDRTQINGVPRDEAVEAIV 662


>gi|281357061|ref|ZP_06243551.1| threonyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548]
 gi|281316619|gb|EFB00643.1| threonyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548]
          Length = 591

 Score =  545 bits (1405), Expect = e-153,   Method: Composition-based stats.
 Identities = 232/577 (40%), Positives = 351/577 (60%), Gaps = 14/577 (2%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           L  IRHS AH+MA AVQ ++P+ +  IGP  E+GFYYDFD E    +++L  IEK M+++
Sbjct: 21  LETIRHSAAHVMAAAVQQLYPDAKFDIGPSTENGFYYDFDMEHRLVTEDLKAIEKAMKKL 80

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
           I R  PF    ++   A ++     + YK+E L  IP    +T Y+ G++ DLCRGPHV 
Sbjct: 81  IGRKLPFECFEMNRADAEKMLSEAGQTYKLERLADIPEDAKITFYKTGDFVDLCRGPHVA 140

Query: 190 STGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKL 249
           ++G++    KL+ +AG+Y+RGD    ML RIYGTA+ ++++L  YL   EE+ KRDHRKL
Sbjct: 141 NSGEIG-AVKLLSIAGSYFRGDEKNKMLQRIYGTAFASEEDLQAYLKQQEEAAKRDHRKL 199

Query: 250 AREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQ 307
             E+DLF  +++ G G++ WH KG  I  T  ++ + +  K+ YE + TP +    LW+ 
Sbjct: 200 GVELDLFSFSDNVGPGLVLWHPKGAFIRHTFETFWKEEHYKNGYELLYTPHIGQSVLWET 259

Query: 308 SGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGS 367
           SGH   Y+  M++    D+     + + +KPMNCP H+ V+   L+SYRELP+R AE G+
Sbjct: 260 SGHLSFYKDGMYSPMQIDE-----KDYYVKPMNCPFHIEVYQSRLRSYRELPLRWAELGT 314

Query: 368 VYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKL 427
           VYR E SG+LHGL+RVRGFTQDD+H+ CT EQ+ +E  ++    + I+K FGF +I   L
Sbjct: 315 VYRYEKSGALHGLLRVRGFTQDDSHIICTPEQIEDEIAEVLRFSLYIWKSFGFTEIKPYL 374

Query: 428 STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAI 487
           STRP K VG    W+ A   ++  +D +       +   V  G GAFYGPK +  +KDAI
Sbjct: 375 STRPAKAVGEPERWEKALVSLRKAIDKLG------LECEVDEGGGAFYGPKIDLKVKDAI 428

Query: 488 GRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           GR+WQ  TIQ DFNLP RF+  Y+    +K  P M+HRA+ GS+ERF GI+IE + G  P
Sbjct: 429 GREWQTATIQFDFNLPERFDMTYIGEDGKKHRPYMVHRALMGSLERFFGILIEQYAGAFP 488

Query: 548 LWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIII 607
           LWL+P QA +  ++    + A  +   L+     +E D +  ++  KI++   ++IP ++
Sbjct: 489 LWLAPEQARILPVSDRQHDAAMALKKELRLKGFRVEVDVKAASLGAKIKDARKERIPYML 548

Query: 608 ICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           + G++EA++ ++ +R         ++L   +  +  E
Sbjct: 549 VVGEREAADGTMAVRNRREGELGTMTLDQLVEKMRFE 585


>gi|294941856|ref|XP_002783274.1| threonyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
 gi|239895689|gb|EER15070.1| threonyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
          Length = 837

 Score =  545 bits (1404), Expect = e-153,   Method: Composition-based stats.
 Identities = 236/746 (31%), Positives = 367/746 (49%), Gaps = 120/746 (16%)

Query: 1   MPSD-IKLTFPDGSIKNFPV-HATGSDVAESISRSLAKKAVAVAI--------------- 43
           +P D I +  PDG+ K       T  D+A  IS+ LA   VA  I               
Sbjct: 58  LPKDPITIVLPDGTQKEGRKFETTPLDIAIGISKGLANSVVAAKILYTEPVDSMDQVVAA 117

Query: 44  ---------------NGK---------------VCDLSDPVR-EGSIEIITPEDPRSLAV 72
                          + +               V DLS P+     +E++  + P     
Sbjct: 118 DDESDVGSDAGDEGSDDEEEAHVNTVKAWQKETVWDLSRPLEGSCKLELLKFDSPEGKDT 177

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQIEKKMQEIIA 131
             HS AHI+ EA++  +    + IGP +E+GFYYD F        ++  +IEK++  I+ 
Sbjct: 178 FWHSSAHILGEAMEQEY-GCYLTIGPPLENGFYYDGFFGNLKLGPNDYEKIEKRIDSIVK 236

Query: 132 RDSPFLKQYLSHEKARELFESKKEAYKVEILE-SIPAKENVTLYRQGEWFDLCRGPHVRS 190
            D  F +  ++ E+A ELF      +K++++   +P     ++YR G   DLCRGPH+  
Sbjct: 237 SDQKFQRLVVTKEEALELFAY--NPFKLQLISTKVPDGSLTSVYRIGSLVDLCRGPHLPR 294

Query: 191 TGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLA 250
           TG  K F+   K + AYW G +    L R+Y  ++ T++ L +Y   +EE+ KRDHR + 
Sbjct: 295 TGIAKAFWVN-KNSQAYWLGKAENDSLQRVYAISFPTEKMLKEYKRNVEEAMKRDHRLIG 353

Query: 251 REMDLFHIAEDGSG-VIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQS 308
           ++ DLF      S    FW   G  I+  L+ ++RR+ +   ++E+ TP +  + L+QQS
Sbjct: 354 KKQDLFFFHPTMSPGSCFWTSHGAVIYNKLVDFIRREYRLRGFDEVITPNIFSEALFQQS 413

Query: 309 GHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV 368
           GH  +Y+ NM+++    +T      + LKPMNCPGH  +F+  ++SY+ELP+R+A+FG +
Sbjct: 414 GHCGNYKDNMYSMNIEGET------WFLKPMNCPGHCMIFDQKVRSYKELPIRMADFGVL 467

Query: 369 YRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLS 428
           +RNE SG+L GL RVR F QDDAH+FC  +Q+ +E +     +  +Y  FGF+  +  LS
Sbjct: 468 HRNELSGTLSGLTRVRRFQQDDAHIFCRPDQVQDEIVHALEFLKFVYNTFGFDFSVC-LS 526

Query: 429 TRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIG 488
           TRP+K +GS A+WD AE+ +K  L+         I+  +  G+GAFYGPK +  L+DA+ 
Sbjct: 527 TRPKKAIGSRAIWDTAESGLKNALEACG------IDYDLNPGDGAFYGPKIDIRLRDALN 580

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEK------------------------------- 517
           R  QCGTIQ+DFNLP RFN  Y  + +E+                               
Sbjct: 581 RYHQCGTIQLDFNLPIRFNLQYRIAETEESGDAHAASEAANSPVNDQQKGSTQSSAAVEN 640

Query: 518 -------------------CHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVT 558
                                PVMIHRA+ GSIER   I+ E+F G  P WLSP Q +V 
Sbjct: 641 VGSKAKADEITLGELRHGFERPVMIHRAILGSIERCTAILTEHFGGKWPFWLSPRQVMVV 700

Query: 559 TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERS 618
            ++    +YA  +   L       + D    T+N K+RE  +     I + G+KE ++ +
Sbjct: 701 PVSDKYSDYADYVRKQLVRLGYEADADLSTRTMNKKVREAQVAAFNYIAVVGEKEQNDLT 760

Query: 619 IGIRRFGS-TTTQKVSLLDAIPILTK 643
           + +R+  +        + +   +  K
Sbjct: 761 VTLRKRDTARPLGTFGIREMFDMFEK 786


>gi|119025818|ref|YP_909663.1| threonyl-tRNA synthetase [Bifidobacterium adolescentis ATCC 15703]
 gi|118765402|dbj|BAF39581.1| threonyl-tRNA synthetase [Bifidobacterium adolescentis ATCC 15703]
          Length = 711

 Score =  545 bits (1403), Expect = e-152,   Method: Composition-based stats.
 Identities = 246/666 (36%), Positives = 365/666 (54%), Gaps = 44/666 (6%)

Query: 1   MPSD-IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI 59
           M    I +T  +G  K      TG  +         K  +AV +NG+  DL   + +G +
Sbjct: 35  MAEQTISITL-NGEKKEVAADQTGVQLFSD-----DKNIIAVRLNGEPRDLYTELHDGDV 88

Query: 60  -EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
            E I  +    +A++RHS  H+MA+AVQ I P+ ++ +GP+I+DGFYYDFD E PF+ ++
Sbjct: 89  VEPIALDSEDGVAIMRHSATHVMAQAVQEIRPDAKLGVGPVIKDGFYYDFDVETPFTPED 148

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPA----------- 167
           L +IEK+MQ II     F ++ ++ E    L E   + YK+E+++   A           
Sbjct: 149 LKEIEKRMQRIIKSSQSFRRRVVTEE--EALAEEADQPYKLELIKDKEAHLDPEAATEIS 206

Query: 168 KENVTLY----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIY 221
            + ++ Y    R+G   W DLCRGPH+ +T  +K F K+ + A AYWRG    PML RIY
Sbjct: 207 GKELSFYDNVDREGNVVWKDLCRGPHLPNTRYIKAF-KIERSAAAYWRGSEANPMLQRIY 265

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLI 280
           G A+ T+++L  Y   LEE+ KRDHRKL  EMDLF   ++ G G+  +H KG  +   + 
Sbjct: 266 GAAFATKEDLKAYQTRLEEAAKRDHRKLGAEMDLFSFPDEIGPGLAVFHPKGAAVINAME 325

Query: 281 SYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT-------IKDLR 332
            Y R    K  Y  + TP +    L++ SGH   Y+ +M+     D+        IK   
Sbjct: 326 DYSREMHRKHHYSFVQTPHITKGGLYETSGHLQWYKDSMYPPMRLDEEKDENGNVIKQGF 385

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
            + LKPMNCP H  +F    +SYRELP+RL EFG+VYR E SG +HGL RVRG TQDD+H
Sbjct: 386 DYYLKPMNCPMHNLIFKSRQRSYRELPLRLFEFGTVYRYEKSGEVHGLTRVRGLTQDDSH 445

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGV 451
           ++CT+EQM +E   +   ++ + KDFG +   ++LST+     VGSD +W++A N +  V
Sbjct: 446 IYCTREQMKDELKSLLTFVLGLLKDFGLDDFYLELSTKDPHKYVGSDEIWEEATNTLAEV 505

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
                   +  ++        AFYGPK     +DAIGR WQ  TIQ+DFNLP RF   Y+
Sbjct: 506 AK------ESGLDLVDDPCGAAFYGPKISVQARDAIGRTWQVSTIQLDFNLPERFKLEYI 559

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
            +      PVMIHRA+FGSIERF  +++E++ G  P WL+P+Q +   +      + Q+ 
Sbjct: 560 AADGTHQRPVMIHRALFGSIERFFAVLLEHYAGAFPAWLAPVQVLGVPVADEFAPHLQKF 619

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
              L+   +  E D  ++    KIR  S  K P I+I G+++ +  ++  R    +    
Sbjct: 620 IASLEEETVRCEIDLSDDRFGKKIRNASKSKAPFILIVGEEDMNNNAVSFRFRDGSQLNG 679

Query: 632 VSLLDA 637
           V + +A
Sbjct: 680 VPVDEA 685


>gi|118471368|ref|YP_887250.1| threonyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
 gi|166225464|sp|A0QWG2|SYT_MYCS2 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|118172655|gb|ABK73551.1| threonyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
          Length = 684

 Score =  545 bits (1403), Expect = e-152,   Method: Composition-based stats.
 Identities = 243/657 (36%), Positives = 372/657 (56%), Gaps = 38/657 (5%)

Query: 17  FPVHATGSDV---AESISRSLAKKAVAVA-INGKVCDLS-DPVREGSIEIITPEDPRSLA 71
            P   T       A+   R      V V    G++ DLS  P  +  +  +  +     +
Sbjct: 15  VPAGTTAGAAVREADLPGRGAPDAIVVVRDAEGRLRDLSWTPDTDVEVTPVAADTEEGRS 74

Query: 72  VIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIA 131
           VIRHSCAH++A+AVQ ++P+ ++ IGP I DGFYYDFD E+PF+ ++L ++EK+M++II 
Sbjct: 75  VIRHSCAHVLAQAVQELFPQAKLGIGPPITDGFYYDFDVEEPFTPEDLERLEKRMRQIIK 134

Query: 132 RDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY---------------RQ 176
               F ++    + A    E   E YK+E+++      +V                  ++
Sbjct: 135 DGQLFSRRVYESKDA-AREELANEPYKLELVDDKSGDPDVMEVGGDELTAYDNLNARTKE 193

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
             W DLCRGPH+ +T  +  F KL + + AYWRGD N   L RIYGTAW +Q+ L ++L 
Sbjct: 194 RVWGDLCRGPHIPTTRYIPAF-KLTRSSAAYWRGDQNNASLQRIYGTAWESQEALDRHLE 252

Query: 237 FLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEI 294
            +EE+++RDHRKL  E+DLF   ++ GSG+  +H +G  + + L  Y RR  ++  YE +
Sbjct: 253 LIEEAQRRDHRKLGVELDLFSFPDELGSGLPVFHPRGGVVRRELEDYSRRKHLEAGYEFV 312

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT-------IKDLRTFALKPMNCPGHVAV 347
           NTP +  + L+  SGH + Y   MF     D          K  + + LKPMNCP H  +
Sbjct: 313 NTPHITKEQLYVTSGHLEWYADGMFPAMHIDAEYDADGQVRKPGQNYYLKPMNCPMHHLI 372

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
           F    +SYRELP+RL EFGSVYR E SG +HGL RVRG TQDDAH++ T+EQM +E  ++
Sbjct: 373 FRSRGRSYRELPLRLFEFGSVYRYEKSGVVHGLTRVRGMTQDDAHIYTTREQMRDELTRL 432

Query: 408 HNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
              ++S+ KD+G +   ++LST+  +  VGSD +W++A   ++ V +         ++  
Sbjct: 433 LEFVLSLLKDYGLDDYYLELSTKDPEKYVGSDEIWEEATETLREVAEASG------LDLV 486

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
              G  AFYGPK    +KDA+GR WQ  TIQ+DFN+P RF   Y  +   +  PV+IHRA
Sbjct: 487 PDPGGAAFYGPKISVQVKDALGRSWQMSTIQLDFNMPDRFELEYTAADGSRRRPVLIHRA 546

Query: 527 VFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF 586
           +FGSIERF G++ E++ G  P WL+P+Q +   +  +   Y +E+A  LKS  + +E D 
Sbjct: 547 LFGSIERFFGVLTEHYAGAFPAWLAPVQVVGIPVADAHTPYLEEVAAQLKSRGVRVEVDS 606

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            ++ +  KI  H+  K+P +++ GDK+A   ++  R    T    V   +A+ ++ +
Sbjct: 607 SDDRMAKKIVNHTNMKVPFMLLAGDKDAEAGAVSFRFGDRTQINGVPRDEAVEMIVR 663


>gi|113475159|ref|YP_721220.1| threonyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
 gi|110166207|gb|ABG50747.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Trichodesmium
           erythraeum IMS101]
          Length = 608

 Score =  544 bits (1402), Expect = e-152,   Method: Composition-based stats.
 Identities = 244/593 (41%), Positives = 365/593 (61%), Gaps = 16/593 (2%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           I +    + ++L  IRH+ +H+MA AVQ ++P+ QV IGP IE+GFYYDFD  + F+  +
Sbjct: 16  IHLPRTSESQTLKKIRHTTSHVMAMAVQKLFPKAQVTIGPWIENGFYYDFDTLESFTEAD 75

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG- 177
           L  I+K+M +II R+ P +++ +S E+A+   E  KE YK+EILE +  ++ +T+Y  G 
Sbjct: 76  LKAIKKEMVKIIKRNLPVIREEVSREEAKRRIEEIKEPYKLEILEDL--EDPITIYHLGE 133

Query: 178 EWFDLCRGPHVRSTGQVKK-FFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           +W+DLC GPH+ ST Q+     +L  VAGAYWRGD  +  L RIYGTAW T ++LT+Y  
Sbjct: 134 DWWDLCAGPHIESTKQINPKAIELETVAGAYWRGDETKAQLQRIYGTAWETPEQLTEYKR 193

Query: 237 FLEESEKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEI 294
             EE+ KR+HRKL +E+ LF  ++  G G+  W  KG  +  +L  +++  ++K  Y  +
Sbjct: 194 RKEEALKRNHRKLGKELGLFIFSDLVGPGLPLWTPKGTMLKNSLKDFLQQEQLKRGYLPV 253

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD-LRTFALKPMNCPGHVAVFNHGLK 353
           +TP +    L++ SGHW  Y+ +MF +   D+  +   + F LKPMNCP H+ ++ + L+
Sbjct: 254 DTPHIARIDLFKTSGHWQKYKEDMFPMMAEDEQAEALEQGFVLKPMNCPFHIQIYKNELR 313

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYRELP+RLAEFG+VYR+E SG L GL RVRGFTQDD+H+F T EQ+  E L + +L + 
Sbjct: 314 SYRELPIRLAEFGTVYRHEKSGELGGLTRVRGFTQDDSHLFVTPEQLDAEFLSVVDLTLF 373

Query: 414 IYKDFGFEKIMVKLSTRPEK---RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
           ++K    +    +LS R       +GSD  W+ AE  ++  ++ +     + I      G
Sbjct: 374 VFKSLQLQNFKARLSFRDPNLDKYIGSDEAWEKAEGAIRRAVEKMGMDHFEGI------G 427

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           E AFYGPK ++I +DA+ R+WQ GT+QVD+NLP RF+  YV     +  PVMIHRA FGS
Sbjct: 428 EAAFYGPKLDFIFQDALEREWQLGTVQVDYNLPERFDLEYVAEDGTRKRPVMIHRAPFGS 487

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
           +ER IGI+IE + G+ P+WL+P Q  +  + S    +AQE+A  +    +  E D  NE 
Sbjct: 488 LERLIGILIEEYAGDFPVWLAPTQVKLLPVNSEFWPFAQEVAEQMLQVGIRAEVDMSNER 547

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +   IR     KIPI+ + G KE    S+ IR   +     + +++ I  +TK
Sbjct: 548 LGKLIRNAEKAKIPIMAVVGAKEVESNSLSIRTRSTGELGSIPVMEVIQKMTK 600


>gi|183982102|ref|YP_001850393.1| threonyl-tRNA synthetase ThrS [Mycobacterium marinum M]
 gi|238690929|sp|B2HM74|SYT_MYCMM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|183175428|gb|ACC40538.1| threonyl-tRNA synthetase ThrS [Mycobacterium marinum M]
          Length = 691

 Score =  544 bits (1402), Expect = e-152,   Method: Composition-based stats.
 Identities = 244/645 (37%), Positives = 364/645 (56%), Gaps = 38/645 (5%)

Query: 28  ESISRSLAKKAVAVAIN--GKVCDLSD-PVREGSIEIITPEDPRSLAVIRHSCAHIMAEA 84
             + R  A  A+ V  +  GK+ DLS  P  +  +  I        +VIRHS AH++A+A
Sbjct: 35  AGLPRRGAPDAIVVVRDAEGKLRDLSWVPDADAEVTPIAANTDDGRSVIRHSTAHVLAQA 94

Query: 85  VQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYL-SH 143
           VQ ++P+ ++ IGP I DGFYYDF+  +PF+ D+L  +EK+M++I+     F ++   S 
Sbjct: 95  VQDLFPQAKLGIGPPITDGFYYDFEVLEPFTPDDLQALEKRMRQIVKEGQLFDRRVFESK 154

Query: 144 EKARELFESKKEAYKVEILESIPAKENVTLY---------------RQGEWFDLCRGPHV 188
           ++ARE  E   E YK+E+++      +V                  R+  W DLCRGPH+
Sbjct: 155 DQARE--ELANEPYKLELVDDKSGDPDVMEVGGDELTAYDNLNPRTRERVWGDLCRGPHI 212

Query: 189 RSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRK 248
            +T  +  F KL + + AYWRGD     L RIYGTAW +Q+ L +++  +EE+++RDHRK
Sbjct: 213 PTTKHIPAF-KLTRSSAAYWRGDQKNASLQRIYGTAWESQEALDKHIELIEEAQRRDHRK 271

Query: 249 LAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ 306
           L  E+DLF   ++ GSG+  +H KG  + + L  Y RRK  +  Y+ +N+P +    L+ 
Sbjct: 272 LGVELDLFSFPDEIGSGLAVFHPKGGIVRRELEDYSRRKHTEAGYQFVNSPHITKAQLFH 331

Query: 307 QSGHWDSYRANMFAVKCADDT-------IKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            SGH D Y   MF     D          K  + + LKPMNCP H  +F    +SYRELP
Sbjct: 332 TSGHLDWYADGMFPPMQIDAEYNADGTVRKPGQDYYLKPMNCPMHCLIFRARGRSYRELP 391

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +RL EFG+VYR E SG +HGL RVRG T DDAH+FCT+EQM +E   +   ++ +  D+G
Sbjct: 392 LRLFEFGTVYRYEKSGVVHGLTRVRGLTMDDAHIFCTREQMRDELRSLLRFVLDLLSDYG 451

Query: 420 FEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
                ++LST+     VGSD +W++A N++  V       ++  +      G  AFYGPK
Sbjct: 452 LTDFYLELSTKDPDKFVGSDEVWEEATNVLAEV------GAESGLELVPDPGGAAFYGPK 505

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
               +KDA+GR WQ  TIQ+DFN P RF   Y  +   +  PVMIHRA+FGSIERF GI+
Sbjct: 506 ISVQVKDALGRTWQMSTIQLDFNFPERFGLEYTAADGTRQRPVMIHRALFGSIERFFGIL 565

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
            E++ G  P WL+P+QA+   +    V Y +++A  LKSH + +E D  ++ +  KI  H
Sbjct: 566 TEHYAGAFPAWLAPVQAVGIPVADEHVAYLEQVAAQLKSHGVRVEVDTSDDRMAKKIVHH 625

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           + +K+P +++ GD++    ++  R    T    V    A+  +  
Sbjct: 626 TNQKVPFMLLAGDRDVQADAVSFRFGDRTQINGVPREAAVAAIVD 670


>gi|238063845|ref|ZP_04608554.1| threonyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
 gi|237885656|gb|EEP74484.1| threonyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
          Length = 676

 Score =  544 bits (1401), Expect = e-152,   Method: Composition-based stats.
 Identities = 241/644 (37%), Positives = 359/644 (55%), Gaps = 48/644 (7%)

Query: 32  RSLAKKAVAVAIN--GKVCDLSD-PVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSI 88
            S   KAV V  +  G + DL   P  + ++E +  + P  L V+RHS AH++A+AVQ +
Sbjct: 31  PSSGPKAVVVVRDPQGNLRDLDWVPAEDTTVEPVALDTPDGLNVLRHSTAHVLAQAVQDV 90

Query: 89  WPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYL-SHEKAR 147
           +PE ++ IGP IE+GFYYDF  ++PF  D+LA++EK+MQEI+     F ++   S ++A+
Sbjct: 91  FPEAKLGIGPPIENGFYYDFAVDKPFQPDDLAKLEKRMQEIVKSGQRFRRRRFASLDEAK 150

Query: 148 ELFESKKEAYKVEILESIPAKENVTLYRQG---------------------------EWF 180
              E   E +K+E+++    +E   +  +G                            W 
Sbjct: 151 A--ELAAEPFKLELVDLKGDQEQGAVKGEGLDSSEVMEVGGGELTIYDNLDAKEEKVCWS 208

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ +T  +  F KLM+ A AYWRG    P L R+YGTAW T+ EL  YL  LEE
Sbjct: 209 DLCRGPHLPNTRLIGAF-KLMRSAAAYWRGSEKNPQLQRVYGTAWPTRDELKAYLKLLEE 267

Query: 241 SEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQ 298
           + +RDHRKL  ++DLF   ++ GSG+  +H KG  I + + +Y R +  +  Y  +NTP 
Sbjct: 268 AARRDHRKLGVDLDLFSFPDELGSGLAVFHPKGGIIRREMENYSRIKHEEAGYAFVNTPH 327

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +   HL++ SGH D Y   MF          +   + LKPMNCP H  +F    +SYREL
Sbjct: 328 ITKGHLYEVSGHLDWYADGMFPPMEV-----EGANYYLKPMNCPMHDLIFRSRGRSYREL 382

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+ EFG+VYR E SG +HGL RVRG TQDDAH+FCT+EQM  E   +   ++ + +D+
Sbjct: 383 PLRMFEFGTVYRYEKSGVVHGLTRVRGMTQDDAHIFCTEEQMAGELKSLLAFVLELLRDY 442

Query: 419 GFEKIMVKLSTRPEKR-VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           G +   ++LSTR  ++ VG+D  W+ A   ++   +      +  ++        AFYGP
Sbjct: 443 GLDDFYLELSTRNPEKSVGTDENWERATEALRTAAE------ESGLHLVPDPAGAAFYGP 496

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K     KDAIGR WQ  TIQVDFNLP RF   Y  +   +  PVMIHRA+FGSIERF G+
Sbjct: 497 KISVQAKDAIGRTWQMSTIQVDFNLPERFGLEYQAADGTRQRPVMIHRALFGSIERFFGV 556

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E++ G  P WL+P+Q +   I     +Y +     L++  +  + D  ++ +  KIR 
Sbjct: 557 LTEHYAGAFPAWLAPVQVVGIPIREDHTDYLRGFVAALRAEGIRAQVDAGDDRMQKKIRT 616

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
              +KIP ++I GD + +  ++  R    +    V   +A+  +
Sbjct: 617 AQQQKIPFMVIAGDDDVAAGTVSFRYRDGSQRNGVPTAEAVAHV 660


>gi|72547539|ref|XP_843247.1| threonyl-tRNA synthetase [Leishmania major strain Friedlin]
 gi|323363762|emb|CBZ12768.1| putative threonyl-tRNA synthetase [Leishmania major strain
           Friedlin]
          Length = 787

 Score =  544 bits (1401), Expect = e-152,   Method: Composition-based stats.
 Identities = 223/746 (29%), Positives = 359/746 (48%), Gaps = 113/746 (15%)

Query: 1   MPSDIKLTFPDGSIKNFPVHAT-GSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGS 58
           M + IK++ PDG + +     T   D+A+ +S SL  K +   +N  + DL+ P   +  
Sbjct: 43  MKAPIKVSLPDGKVMDAESWVTCPLDIAKRLSNSLPDKVIVARVNEALWDLTRPFEADCQ 102

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSD 117
           +E++   +  +  V  HS +H++  A++ I+ + ++++GP +E+G F+Y+    +P S  
Sbjct: 103 LELLDWAEKDAREVFWHSSSHVLGYALERIF-DTKLSVGPALEEGGFFYEGLTNRPVSES 161

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +   IE  MQE++ +  P+ +  +S E A  LF   +   K+ +   +P   + T+YR G
Sbjct: 162 DYKAIESAMQELVKQKMPYQRLEVSKEDALRLFGYTEFKSKI-LASKVPDGGSCTVYRCG 220

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
              D CRGPH+  TG+VK F  + K + +Y+ G +   +L R+YG ++     LT++   
Sbjct: 221 MLIDPCRGPHLPDTGRVKAF-AVTKNSSSYFEGKAENEVLQRVYGISFPKNPMLTEWKTI 279

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
            EE+ KRDHR + R+ +LF+  E   G  FW   G +I+ TL+ ++R+K +   ++E+ +
Sbjct: 280 QEEAAKRDHRVIGRQQNLFNFHEVSPGSAFWLPHGARIYNTLVEFLRKKYRRCGFQEVIS 339

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +    LW  SGHW+ Y  +MF  KC      +   F LKPMNCPGH  +F     SY+
Sbjct: 340 PNMYSSKLWMVSGHWEKYADSMFCTKC------EKEDFGLKPMNCPGHCIMFASQPHSYK 393

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ELP+R A+FG ++RNE SG+L GL RVR F QDDAH+FC  +Q+ +E       +  +Y 
Sbjct: 394 ELPIRYADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCRMDQITDEMEGQMQFLSDVYG 453

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTI--------------------- 455
             GF K     STRP  ++GSDALWD +E+ ++  L+                       
Sbjct: 454 VLGF-KFYFYHSTRPANKLGSDALWDQSESYLRTALNRFCGIPEELPDPLHPDQRFHYDG 512

Query: 456 ------------------------KNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDW 491
                                   K  +         +G+GAFYGPK + +++DA+ R  
Sbjct: 513 KPDSVKKMKALMKKAERSEDPNAWKGPTNGGDGWIENVGDGAFYGPKIDIVVEDALRRRH 572

Query: 492 QCGTIQVDFNLPSRFNAFY----VNSHSEKCHPVMIHR---------------------- 525
           QC TIQ+DFNLPSRF   Y             P    R                      
Sbjct: 573 QCATIQLDFNLPSRFGLKYTLPAAEKDETTVGPTEKQRHADPAPTASSPAVAEGESKPKP 632

Query: 526 ----------------------------AVFGSIERFIGIMIENFKGNLPLWLSPIQAIV 557
                                       A+ GS+ER I I+ E+F G+ P WLSP Q +V
Sbjct: 633 GKYEAAVRDLGIDLELDANQARPVMIHRAILGSLERSIAILCEHFGGDWPFWLSPRQVMV 692

Query: 558 TTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASER 617
             +++S  EY+Q++ + +      ++ D    T++ KIR     +   I++ G +E    
Sbjct: 693 VPVSASNYEYSQQVRDTIHDAGFHVDVDNGAATLDKKIRNAEKARYNFILVVGQQEQDAT 752

Query: 618 SIGIRRFGSTTTQKVSLLDAIPILTK 643
            + IR  G       SL++A+    +
Sbjct: 753 GVSIRARGEKRLGNKSLVEAVQWFKE 778


>gi|54025682|ref|YP_119924.1| threonyl-tRNA synthetase [Nocardia farcinica IFM 10152]
 gi|54017190|dbj|BAD58560.1| putative threonyl-tRNA synthetase [Nocardia farcinica IFM 10152]
          Length = 703

 Score =  544 bits (1401), Expect = e-152,   Method: Composition-based stats.
 Identities = 247/657 (37%), Positives = 363/657 (55%), Gaps = 40/657 (6%)

Query: 17  FPVHAT-GSDVAESISRSLAKKAVAVAIN--GKVCDLS-DPVREGSIEIITPEDPRSLAV 72
            P   T G+ V E+   +     + V  +  G + DLS  P  +  +E +        +V
Sbjct: 32  VPAGTTAGAAVREAGLPTKGPDTIVVVRDAEGALRDLSWTPDTDVEVEAVPASTEAGRSV 91

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIAR 132
           IRHS AH++A+AVQ  +PE ++ IGP I+DGFYYDF  E+PF+ ++LA++E +M++II  
Sbjct: 92  IRHSAAHVLAQAVQQEFPEAKLGIGPPIKDGFYYDFQVERPFTPEDLARLESRMKKIIKG 151

Query: 133 DSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE-------------- 178
              F ++ +  E+AR   E   E +K+E++      ++  +   G               
Sbjct: 152 AQRFSRRVVEIEEARA--ELANEPFKLELISDKSGIDDPEVMEVGGKELTIYDNLDPRTG 209

Query: 179 ---WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
              W DLCRGPH+ +T  +  F KL + + AYWRGD NR  L RIYGTAW + + L  +L
Sbjct: 210 EKVWGDLCRGPHIPTTKFIPAF-KLTRSSAAYWRGDQNREDLQRIYGTAWESPEALEAHL 268

Query: 236 YFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEE 293
           + L E+E+RDHRKL  E+DLF   ++ GSG+  +H KG  I + L  Y RR  +   YE 
Sbjct: 269 HVLAEAERRDHRKLGLELDLFSFPDELGSGLPVFHPKGGIIRKELEEYSRRRHVDAGYEF 328

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD-------LRTFALKPMNCPGHVA 346
           +NTP +   HL++ SGH D YR  MF     D    D        + + +KPMNCP H  
Sbjct: 329 VNTPHITKGHLFEVSGHLDWYRDGMFPAMHLDAEYNDDGTVRKPGQDYYVKPMNCPMHNL 388

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           +F    +SYRELP+RL EFGSVYR E SG +HGL RVRG TQDDAH++CTKEQM  E   
Sbjct: 389 IFRARGRSYRELPLRLFEFGSVYRYEKSGVVHGLTRVRGMTQDDAHIYCTKEQMHAELTN 448

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
               ++ +  D+G +   ++LST+  K  VGSD +W++A   +  V           +  
Sbjct: 449 TLQFVLGLLADYGLDDFYLELSTKDPKKFVGSDEIWEEATETLSKVAQASG------LEL 502

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
               G  AFYGPK     KDA+GR WQ  TIQ+DFNLP RF   Y      K  PVMIHR
Sbjct: 503 VPDPGGAAFYGPKISVQAKDALGRTWQMSTIQLDFNLPERFGLEYTAPDGSKQRPVMIHR 562

Query: 526 AVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD 585
           A+FGSIERF G++ E++ G  P WLSP+Q +   +  +   +   +  LL+ H +  + D
Sbjct: 563 ALFGSIERFFGVLTEHYAGAFPAWLSPVQVVGIPVAEAFAPHLDRVVELLRDHGVRAQVD 622

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             ++ +  KI  ++ +K+P +++ G+++ +  ++  R    T    V + DA+  + 
Sbjct: 623 RSDDRMQKKIFNNTAQKVPFMLLAGERDVNAGAVSFRFRDGTQVNGVPVADAVATIV 679


>gi|119716597|ref|YP_923562.1| threonyl-tRNA synthetase [Nocardioides sp. JS614]
 gi|166225470|sp|A1SJ90|SYT_NOCSJ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|119537258|gb|ABL81875.1| Ser-tRNA(Thr) hydrolase [Nocardioides sp. JS614]
          Length = 668

 Score =  543 bits (1400), Expect = e-152,   Method: Composition-based stats.
 Identities = 237/675 (35%), Positives = 364/675 (53%), Gaps = 50/675 (7%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEI 61
           SD+K+       +      TG+   E          +A  +NG + DL+  + +G  +E 
Sbjct: 2   SDLKIALTHADAREERTVTTGTKAWELFQDD--PSVIAARVNGALRDLAHELADGDQVEP 59

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +  + P    ++RHS AH+MA+AVQ ++P+ ++ IGP +E+GFYYDFD + PF+  +L +
Sbjct: 60  VAIDSPDGHDILRHSTAHVMAQAVQQLFPDAKLGIGPPVENGFYYDFDVDTPFNPADLDK 119

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE------------------ 163
           IE  M++II     F ++  +   A  + E + E YK+E++                   
Sbjct: 120 IETAMRKIIKEGQRFSRRVTT--DADAISELRDEPYKIELIGLKGSGASTGSTTEAVEGA 177

Query: 164 -------SIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPM 216
                   +   +N+       W DLCRGPH+ +T ++  F KLM+ A AYWRG+     
Sbjct: 178 SVEVGAGELTIYDNIRRNGDVAWSDLCRGPHLPTTKRIPAF-KLMRTAAAYWRGNEKNKQ 236

Query: 217 LSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKI 275
           L RIYGTAW ++  L ++L+ +EE+E+RDHRKL R++DLF   ++ GSG+  +H KG  I
Sbjct: 237 LQRIYGTAWESKDALEEHLHRIEEAERRDHRKLGRDLDLFSFPDEIGSGLPVFHPKGGVI 296

Query: 276 FQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
            + +  Y+R R +++ +E + TP +  + L+  SGH   Y   MF          D   +
Sbjct: 297 KRVMEDYVRQRHVEEGFEYVGTPHIAKEGLFYTSGHLPYYGEAMFPPLDV-----DGMDY 351

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
            LK MNCP H  +F    +SYRELP+RL EFG VYR+E SG +HGL RVRGF QDD+H +
Sbjct: 352 RLKAMNCPMHNLIFRSRQRSYRELPLRLFEFGHVYRHEKSGVIHGLTRVRGFAQDDSHSY 411

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKG 450
            TKEQ   E   + +  + +++DFG +   ++LSTR    P+K +GSD  W  A  +++ 
Sbjct: 412 VTKEQAPAEIKHLLDFCLGLFRDFGLDDFYLELSTRDDSKPDKFIGSDEDWAVATKVLED 471

Query: 451 VLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPS--RFNA 508
           V           +      G  A+YGPK     +DAIGR WQ  TIQ DFN PS  RF+ 
Sbjct: 472 VCIASG------LELVPDPGGAAYYGPKVSVQARDAIGRTWQMSTIQYDFNQPSADRFDL 525

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYA 568
            Y  +   +  PVMIH A FGSIERFIG+++E++ G  P WL+P+Q     I     +Y 
Sbjct: 526 HYTAADGSRQQPVMIHSAKFGSIERFIGVLVEHYAGAFPPWLAPVQVQAIPIAERHNDYL 585

Query: 569 QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
            ++A  +++  L +E D  ++ +  KIR   + K+P ++I GD + +  ++  R      
Sbjct: 586 YDVAKRMQAQGLRVEVDDSDDRMQKKIRNAQLLKVPFMMIAGDDDVAAGAVSFRYRDGRQ 645

Query: 629 TQKVSLLDAIPILTK 643
              V L +AI  +  
Sbjct: 646 DNGVPLDEAIRRVAD 660


>gi|254232730|ref|ZP_04926057.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis C]
 gi|124601789|gb|EAY60799.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis C]
          Length = 692

 Score =  543 bits (1400), Expect = e-152,   Method: Composition-based stats.
 Identities = 248/663 (37%), Positives = 369/663 (55%), Gaps = 42/663 (6%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVA-INGKVCDLSD-PVREGSI 59
           PS  ++  P G+     V   G        R      V V   +G + DLS  P  +  I
Sbjct: 16  PSQARIRVPAGTTAATAVGEAGLP-----RRGTPDAIVVVRDADGNLRDLSWVPDVDTDI 70

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
             +        +VIRHS AH++A+AVQ ++P+ ++ IGP I DGFYYDFD  +PF+ ++L
Sbjct: 71  TPVAANTDDGRSVIRHSTAHVLAQAVQELFPQAKLGIGPPITDGFYYDFDVPEPFTPEDL 130

Query: 120 AQIEKKMQEIIARDSPFLKQYL-SHEKARELFESKKEAYKVEILESIPAK--------EN 170
           A +EK+M++I+     F ++   S E+AR   E   E YK+E+++             + 
Sbjct: 131 AALEKRMRQIVKEGQLFDRRVYESTEQARA--ELANEPYKLELVDDKSGDAEIMEVGGDE 188

Query: 171 VTLY-------RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
           +T Y       R+  W DLCRGPH+ +T  +  F KL + + AYWRGD     L RIYGT
Sbjct: 189 LTAYDNLNPRTRERVWGDLCRGPHIPTTKHIPAF-KLTRSSAAYWRGDQKNASLQRIYGT 247

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISY 282
           AW +Q+ L ++L F+EE+++RDHRKL  E+DLF   ++ GSG+  +H KG  + + L  Y
Sbjct: 248 AWESQEALDRHLEFIEEAQRRDHRKLGVELDLFSFPDEIGSGLAVFHPKGGIVRRELEDY 307

Query: 283 MRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT-------IKDLRTF 334
            RRK  +  Y+ +N+P +    L+  SGH D Y   MF     D          K  + +
Sbjct: 308 SRRKHTEAGYQFVNSPHITKAQLFHTSGHLDWYADGMFPPMHIDAECNADGSLRKPGQDY 367

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
            LKPMNCP H  +F    +SYRELP+RL EFG+VYR E SG +HGL RVRG T DDAH+F
Sbjct: 368 YLKPMNCPMHCLIFRARGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRVRGLTMDDAHIF 427

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLD 453
           CT++QM +E   +   ++ +  D+G     ++LST+  +  VG++ +W++A  ++  V  
Sbjct: 428 CTRDQMRDELRSLLRFVLDLLADYGLTDFYLELSTKDPEKFVGAEEVWEEATTVLAEV-- 485

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS 513
                ++  +      G  AFYGPK    +KDA+GR WQ  TIQ+DFN P RF   Y  +
Sbjct: 486 ----GAESGLELVPDPGGAAFYGPKISVQVKDALGRTWQMSTIQLDFNFPERFGLEYTAA 541

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIAN 573
              +  PVMIHRA+FGSIERF GI+ E++ G  P WL+P+Q +   +    V Y +E+A 
Sbjct: 542 DGTRHRPVMIHRALFGSIERFFGILTEHYAGAFPAWLAPVQVVGIPVADEHVAYLEEVAT 601

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            LKSH +  E D  ++ +  KI  H+  K+P +++ GD++ +  ++  R    T    V+
Sbjct: 602 QLKSHGVRAEVDASDDRMAKKIVHHTNHKVPFMVLAGDRDVAAGAVSFRFGDRTQINGVA 661

Query: 634 LLD 636
             D
Sbjct: 662 RDD 664


>gi|300787200|ref|YP_003767491.1| threonyl-tRNA synthetase [Amycolatopsis mediterranei U32]
 gi|299796714|gb|ADJ47089.1| threonyl-tRNA synthetase [Amycolatopsis mediterranei U32]
          Length = 675

 Score =  543 bits (1400), Expect = e-152,   Method: Composition-based stats.
 Identities = 244/666 (36%), Positives = 362/666 (54%), Gaps = 45/666 (6%)

Query: 17  FPVHAT-GSDVAESISRSLAKKAVAVAIN--GKVCDLSD-PVREGSIEIITPEDPRSLAV 72
            P   T G+ V E+   +  +  V V  +  GK+ DL+  P  +  +E +        +V
Sbjct: 17  VPAGTTAGAAVREAGLPTKGEDTVVVVRDAEGKLRDLAWVPEADAEVEPVAANTEDGRSV 76

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIAR 132
           IRHS AH++A+AVQ  +P+ ++ IGP ++DGFYYDF  ++PF+ ++L  +EK+M++I+  
Sbjct: 77  IRHSAAHVLAQAVQQQFPDAKLGIGPPVKDGFYYDFAVDKPFTPEDLQALEKRMKQIVKG 136

Query: 133 DSPFLKQYL-SHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE------------- 178
              F ++   S ++AR+  E   E +K+E+++     +   +   GE             
Sbjct: 137 AQQFSRRVFDSVDEARK--ELADEPFKLELVDLKSEVDTSEVMEVGEGELTIYDNLDPRT 194

Query: 179 ----WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
               W DLCRGPHV +T  +  F KL +VA AYWRG    P L RIYGTAW + +    Y
Sbjct: 195 KERVWSDLCRGPHVPTTKFIPAF-KLTRVAAAYWRGSEKNPQLQRIYGTAWESAEAQDAY 253

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYE 292
           L  + E+E+RDHRKL  E+DLF   E+ GSG+  +H KG  I + L +Y RR+ ++  YE
Sbjct: 254 LERIAEAERRDHRKLGAELDLFSFPEEIGSGLPVFHPKGGIIRRELENYSRRRHEEAGYE 313

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
            +NTP +    L+  SGH   Y   MF     D+       + LK MNCP H  +F    
Sbjct: 314 FVNTPHISKGELFHTSGHLPYYADTMFPPVQFDE-----ENYYLKAMNCPMHNLIFRSRG 368

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
           +SYRELP+RL EFG+VYR E SG +HGL RVRG T DD+H++CTKEQM  E   +   ++
Sbjct: 369 RSYRELPLRLFEFGTVYRYEKSGVVHGLTRVRGLTMDDSHIYCTKEQMPGELRSLLKFVL 428

Query: 413 SIYKDFGFEKIMVKLSTR--PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
            +  D+G     ++LSTR   +K +G D  W++A   ++             +      G
Sbjct: 429 DLLADYGLSDFYLELSTRGDSDKFIGEDWEWEEATETLRQAAVDSG------LELVPDPG 482

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
             AFYGPK     KDAIGR WQ  TIQ+DFN   RF   Y      +  PVMIHRA+FGS
Sbjct: 483 GAAFYGPKISVQAKDAIGRTWQMSTIQLDFNQNKRFGLEYTAPDGSRQTPVMIHRALFGS 542

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
           IERF G++ E++ G  P WLSP+Q +   IT+  VEY Q++   L++  L  E D  ++ 
Sbjct: 543 IERFFGVLTEHYAGAFPAWLSPVQVVGIPITADQVEYLQDVEKALRAKGLRAEVDASDDR 602

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK-----ES 645
           +  KIR H+ +K+P +++ G K+    ++  R         V +  A+  + +     E+
Sbjct: 603 MQKKIRTHTTQKVPFMLLAGAKDVEAGAVSFRFRDGGQINGVPVEKAVEAIAEWVERREN 662

Query: 646 LPPDCQ 651
             P  +
Sbjct: 663 ASPSAE 668


>gi|85057943|ref|YP_456859.1| threonyl-tRNA synthetase [Aster yellows witches'-broom phytoplasma
           AYWB]
 gi|123738887|sp|Q2NIG3|SYT_AYWBP RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|84790048|gb|ABC65780.1| threonyl-tRNA synthetase [Aster yellows witches'-broom phytoplasma
           AYWB]
          Length = 641

 Score =  543 bits (1400), Expect = e-152,   Method: Composition-based stats.
 Identities = 227/652 (34%), Positives = 374/652 (57%), Gaps = 23/652 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEII 62
            IK++F D  I+ F    T   + +       KK VA   N +  +L  P+++ G++EI+
Sbjct: 1   MIKISFFDNQIQEFISGTTPLAIWKEHLSEHFKKPVAALFNNQPIELDFPLKKNGNLEIL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQ 121
           T  DP+SL V+ HS AH+MA+AV  ++P+    +GP I++GFYYD D  +   S  +   
Sbjct: 61  TESDPKSLEVLNHSTAHLMAQAVARLYPDALFTVGPAIKEGFYYDIDFQKHTISEKDFLT 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK M +I   +    ++ +S EKA++L       YK  +LE     + +++YRQGE+FD
Sbjct: 121 IEKVMHQISLENHKITREEISFEKAKKL--FAYNPYKQVLLEKF-RDQTISIYRQGEFFD 177

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG HV  T  +K F K++K++GAY++GD+    L+RIYGT++  +Q L  YL  LEE 
Sbjct: 178 LCRGVHVIKTNLIKHF-KILKISGAYFQGDAKNKTLTRIYGTSFFKKQALADYLQLLEER 236

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDH+K+ +E+DLF   ++   G+ FW  KG  + + +  Y+  +++  DY  + TP +
Sbjct: 237 KERDHKKINKELDLFMFNKEVGLGLPFWLPKGATVRRIVERYIVDKELSYDYHHVYTPIM 296

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +  L++ SGH D Y +NMF +   ++         L+PMNCP H+ ++     SY+ELP
Sbjct: 297 ANTELYRISGHLDHYASNMFPIMSLEN----GEKLVLRPMNCPHHMMIYKKNPHSYKELP 352

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG++ GL RVR  T +DAH+F   +Q+  E  KI NLI+ +Y DF 
Sbjct: 353 LRIAELGMMHRFEKSGAVSGLQRVREMTLNDAHIFARPDQIKEEIKKIINLILEVYCDFN 412

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
            +   ++LS R           D +W +AE  +K  +  +    ++ I      GE AFY
Sbjct: 413 IKNYELRLSYRNPNNTEKYFNDDQMWYNAEKTLKETIKELGLPFKEAI------GEAAFY 466

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  + +A+G +    T+Q+DF LP +F+  ++   ++   PV+IHRAV  ++ERF+
Sbjct: 467 GPKLDVQVFNALGNEETLSTVQLDFLLPQKFDLTFIGEDNKHHRPVVIHRAVVSTMERFL 526

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             ++E  KG  PLWL+P+Q ++  ++     E++Q+I   L+  +  +E + ++ T+ YK
Sbjct: 527 AHLVEETKGVFPLWLAPVQVLLIPVSAPLHFEFSQKIKETLQLQNFRVEINSKDNTLGYK 586

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           IRE    KIP  ++ GD E     I  R++GS     + + + + +L  + L
Sbjct: 587 IREAQKLKIPYQVVIGDHEMINNLITFRKYGSHLQTTIKVDEFVSLLKDKVL 638


>gi|218245600|ref|YP_002370971.1| threonyl-tRNA synthetase [Cyanothece sp. PCC 8801]
 gi|257058646|ref|YP_003136534.1| threonyl-tRNA synthetase [Cyanothece sp. PCC 8802]
 gi|218166078|gb|ACK64815.1| threonyl-tRNA synthetase [Cyanothece sp. PCC 8801]
 gi|256588812|gb|ACU99698.1| threonyl-tRNA synthetase [Cyanothece sp. PCC 8802]
          Length = 607

 Score =  543 bits (1400), Expect = e-152,   Method: Composition-based stats.
 Identities = 249/599 (41%), Positives = 364/599 (60%), Gaps = 16/599 (2%)

Query: 53  PVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ 112
            V E  I++    +  +L  IRH+ +HIMA AVQ ++P+ QV IGP  E GFYYDFD  +
Sbjct: 9   EVSEQPIKLPRTSESDTLKRIRHTTSHIMAMAVQKLFPKAQVTIGPWTETGFYYDFDVPE 68

Query: 113 PFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVT 172
           PF+   L  I+K+M +II R  P +++ ++ E+A++  E  +E YK+EILE +  +  +T
Sbjct: 69  PFTEQNLKDIKKEMIKIINRKLPVIREEVTPEEAKKRIEQLQEPYKLEILEGL--QPPIT 126

Query: 173 LYRQGE-WFDLCRGPHVRSTGQVKK-FFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQE 230
           LY  G+ W+DLC GPHV +TG +    F L  VAGAYWRGD  +  L RIYGTAW T ++
Sbjct: 127 LYHLGDQWWDLCAGPHVETTGDINPKAFDLETVAGAYWRGDETKAQLQRIYGTAWETPEQ 186

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYM-RRKIK 288
           LT+Y    EE+ KRDHRKL +E+ LF  +   G G+  W  KG  I  TL  ++ R ++K
Sbjct: 187 LTEYKRRKEEALKRDHRKLGKELGLFIFSDPVGPGLPLWTPKGTIIRSTLEDFLKREQLK 246

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR-TFALKPMNCPGHVAV 347
             Y  + TP +    L++ SGHW +Y+ +MF +   +         FALKPMNCP H+ +
Sbjct: 247 RGYLSVVTPHIGRVDLFKISGHWQNYKEDMFPMMAENAEEAAQEIGFALKPMNCPFHIQI 306

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
           +   L+SYRELP+RLAEFG+VYR E SG L GL RVRGFT DD+H+F T +Q+  E L +
Sbjct: 307 YKSELRSYRELPIRLAEFGTVYRYEQSGELGGLTRVRGFTVDDSHLFVTPDQLDAEFLNV 366

Query: 408 HNLIISIYKDFGFEKIMVKLSTRPEK---RVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            +LI++++K    +    +LS R  +    +GSD  W+ A+N ++  + T++      ++
Sbjct: 367 VDLILAVFKSLQLKNFKARLSFRDPESDKYIGSDEAWEKAQNAIRRAVQTLE------MD 420

Query: 465 TGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIH 524
                GE AFYGPK ++I  D + R+WQ GT+QVD+NLP RF   YV     +  PVMIH
Sbjct: 421 YFEAPGEAAFYGPKLDFIFHDVLEREWQLGTVQVDYNLPQRFELEYVAEDGTRQRPVMIH 480

Query: 525 RAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIET 584
           RA FGS+ER IGI+IE + G+ PLWLSPIQA +  ++   ++YA+E+A+ ++   +  E 
Sbjct: 481 RAPFGSLERLIGILIEEYAGDFPLWLSPIQARLLPVSDLQLDYAKEVASKMQQLGIRAEA 540

Query: 585 DFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           D   E +   +R    +KIP++ + G KE    S+ IR   S     ++  + I  L +
Sbjct: 541 DTSGERLGKMVRNAEKQKIPVMGVIGAKEVESNSLSIRTRASGELGTIATDEVIKKLAE 599


>gi|254411303|ref|ZP_05025080.1| threonyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420]
 gi|196181804|gb|EDX76791.1| threonyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420]
          Length = 609

 Score =  543 bits (1399), Expect = e-152,   Method: Composition-based stats.
 Identities = 239/600 (39%), Positives = 362/600 (60%), Gaps = 23/600 (3%)

Query: 53  PVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ 112
           P +   I +    +  SL  IRH+ +H+MA AVQ ++P  QV IGP IE+GFYYDF K +
Sbjct: 12  PQKPEKIHLPRTSESESLKKIRHTASHVMAMAVQKLFPGTQVTIGPWIENGFYYDFAKPE 71

Query: 113 PFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVT 172
           PF+  +L  I+K+M +I+ R  P +++ +S E+A    +   E YK+EIL+ +  ++ +T
Sbjct: 72  PFTEQDLKAIKKEMVKILKRKLPLIREEVSREEAERRIKELGEPYKLEILQDL--EDPIT 129

Query: 173 LYRQG-EWFDLCRGPHVRSTGQVKK-FFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQE 230
           LY  G +W+DLC GPHV +T  +      L  VAGAYWRGD+++  L RIYGTAW T ++
Sbjct: 130 LYHLGEDWWDLCAGPHVETTADIHPKAIDLESVAGAYWRGDASKAQLQRIYGTAWETPEQ 189

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYM-RRKIK 288
           LT+Y    +E+ KRDHRKL +++ LF ++   G G+  W  KG  +  TL  ++ + +IK
Sbjct: 190 LTEYKRRKQEALKRDHRKLGKDLGLFILSDPVGPGLPLWTPKGTILRSTLEDFLKQEQIK 249

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
             Y+ + TP +    L++ SGHW  Y+ ++F +        +   F LK MNCP HV ++
Sbjct: 250 RGYQPVVTPHIGRVELFKTSGHWQKYKEDLFPMMGE----SEAEGFVLKAMNCPFHVQIY 305

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
            H L+SYR+LP+RLAEFG+VYR E SG L GL RVRGFTQDDAH+F T EQ+ +E L++ 
Sbjct: 306 KHELRSYRDLPMRLAEFGTVYRYEQSGELGGLTRVRGFTQDDAHLFVTPEQLDDEFLRVV 365

Query: 409 NLIISIYKDFGFEKIMVKLSTRPE---KRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
           +L +S++   G +    +LS R     K +GSD  W+ +EN ++  ++T+     + I  
Sbjct: 366 DLTLSVFNTLGLQDFKARLSFRDPSQDKYIGSDEAWNKSENAIRRAVETLGMGHFEGI-- 423

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
               GE AFYGPK +++  DA+ R+WQ GT+QVD+NLP RFN  YV     +  PVMIHR
Sbjct: 424 ----GEAAFYGPKLDFMFHDALDREWQLGTVQVDYNLPERFNLEYVAEDGTRQRPVMIHR 479

Query: 526 AVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD 585
           A FGS+ER IGI+IE + G+ P WL+P+QA +  ++   + +A+E+A  ++   + +E D
Sbjct: 480 APFGSLERLIGILIEEYAGDFPFWLAPVQARLLPVSDEQLTFAKEVAQKMRLVGVRVEVD 539

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG----STTTQKVSLLDAIPIL 641
              + +   IR     KIP++ + G KE    S+ +R       S     + +   +  +
Sbjct: 540 TSGDRLPKMIRNGEKAKIPVMAVVGAKEVESNSLSVRIREAGKQSQDLGAIPVAQVLERM 599


>gi|301095894|ref|XP_002897046.1| threonyl-tRNA synthetase [Phytophthora infestans T30-4]
 gi|262108475|gb|EEY66527.1| threonyl-tRNA synthetase [Phytophthora infestans T30-4]
          Length = 725

 Score =  543 bits (1399), Expect = e-152,   Method: Composition-based stats.
 Identities = 232/672 (34%), Positives = 361/672 (53%), Gaps = 45/672 (6%)

Query: 2   PSDIKLTFPDGSIKNF---PVHATGSDVAESISR-SLAK-KAVAVAIN---GKVCDLSDP 53
           P ++ +  P G    F      +T  DV + +    L K KA+A   N   G++ DL  P
Sbjct: 61  PLELAVQSPTGDTFAFSGIAGASTSIDVLKQMHELGLPKFKALASK-NQDTGEILDLRAP 119

Query: 54  VREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPII-EDGFYYDFDKE 111
           ++ G+++++        +V  HS AH++ +A++  + + +++  GP + E GF+Y+   +
Sbjct: 120 LQPGTLQLLDFSSDEGKSVFWHSSAHVLGQALEDKYQDKIRLTDGPPLKEGGFFYEMFLQ 179

Query: 112 Q--PFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKE 169
                S  +  ++ + +++I+    PF +  ++ E A +LF      +K ++L  IP  E
Sbjct: 180 DGLTVSETDFDELSRSIKKIVKARQPFERLQVTREFADKLFAYSD--FKRDMLHKIPEGE 237

Query: 170 NVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQ 229
            ++LYR G   DLCRGPHV  TG +  F ++ +   ++W     + +L R+Y  ++    
Sbjct: 238 AISLYRCGPLIDLCRGPHVPHTGMLSSF-EITRCGASHW---EGKELLQRVYAISFPNNT 293

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           +L ++ +  EE++KRDHR + R   LF       G  F+   G ++F TL  ++RR+ + 
Sbjct: 294 QLKEWRHLQEEAKKRDHRLIGRAQQLFMFHPLSPGSSFFLPHGTRVFNTLADFIRREYRR 353

Query: 290 -DYEEINTPQVLDQHLWQQSGHWDSYRANMFAV----------KCADDTIKDLRT----F 334
             Y+E+ TP +  + LW+ SGH  +Y  +MF V          +    T          F
Sbjct: 354 RGYDEVITPLIFKKELWETSGHLQNYHDDMFMVSQGIATDDACEEHGHTHSHGEEEYDQF 413

Query: 335 ALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
            LKPMNCPGH  +F    K SYRELPVRLA+F +++RNE SG+L GL RVR F QDDAH+
Sbjct: 414 GLKPMNCPGHCLLFREAKKYSYRELPVRLADFSALHRNEASGALTGLTRVRRFHQDDAHI 473

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
           FCT  Q+ +E     + I  +Y  F F+  + +LSTRPEK +G   LWDDAE+ ++  LD
Sbjct: 474 FCTAAQVQSEMSLALDFIKHVYGIFDFKFNL-RLSTRPEKYMGDLELWDDAEDQLRLALD 532

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS 513
                        V  G+GAFYGPK + ++ DA+ R  QCGTIQ+DF LP  F   Y  +
Sbjct: 533 DFGQPW------TVNEGDGAFYGPKIDIVVTDALQRQHQCGTIQLDFQLPINFELEYDGA 586

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIAN 573
             E   P++IHRAV GSIER + I+IE+  G  PLWLSP Q  V  I  +  EYA E+A+
Sbjct: 587 DGEAHTPIIIHRAVLGSIERMMAILIEHTGGKWPLWLSPRQVAVLPIAEAHREYAYEVAS 646

Query: 574 LLKSH---HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
            L++     L ++    ++T+N +IRE  +     I++ GDKE +   + IR   +    
Sbjct: 647 TLQNATARGLYVDVQDGSKTLNKRIREAQVAGYNYILVVGDKEQASGEVNIRTRDNQVHG 706

Query: 631 KVSLLDAIPILT 642
              L D I  +T
Sbjct: 707 AKPLGDFIDDIT 718


>gi|257387444|ref|YP_003177217.1| threonyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286]
 gi|257169751|gb|ACV47510.1| threonyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286]
          Length = 640

 Score =  543 bits (1399), Expect = e-152,   Method: Composition-based stats.
 Identities = 242/646 (37%), Positives = 367/646 (56%), Gaps = 23/646 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
           S + +T PDGS     V AT  D A  I   L    VA  ++G++ D   P+  +  +EI
Sbjct: 2   STVTVTLPDGSPLELEVGATVEDAAYEIGPGLGSDTVAGVVDGELVDKHTPLPDDADLEI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +T      + V+RHS AH+ A+A+Q ++PE ++ +GP  +DGFYYD         D    
Sbjct: 62  VTDGADEYVDVLRHSAAHVFAQALQRLYPEAELTLGPWTDDGFYYDVTGVDLDEDDLEDI 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLYRQGEWF 180
            E+   EIIA D    +  L  E A + +E     YK EIL +  A E+ V+ Y QGE++
Sbjct: 122 EEEA-HEIIAEDLDIERVMLDREAALDRYE--DNEYKQEILATEAAGEDPVSFYEQGEFY 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLC+GPHV STG++  F  L +++ +YWRG+ +   L+R+YGTA+ T++EL +YL   ++
Sbjct: 179 DLCQGPHVESTGEIGGFALL-EMSASYWRGEEDNDTLTRVYGTAFPTEEELDEYLERRQK 237

Query: 241 SEKRDHRKLAREMDLFHIAEDG-SGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           +++RDHRK+ +EMDLF I E    G+  +   G  +   L  Y+    ++  Y+E+ TP 
Sbjct: 238 AKERDHRKIGQEMDLFSIDETTGPGLPLYEPNGKTVLNELSEYVADLNREAGYDEVETPH 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    LW++SGH+D+Y  +MF +   D        + LKPMNCPGH  +F+    SYR+L
Sbjct: 298 VFRTELWKKSGHYDNYVDDMFLLDVND------EEYGLKPMNCPGHATIFDQKSWSYRDL 351

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R  E G VYR E  G L GL R   FT DD H+F   +Q+  E L I ++I+ I   F
Sbjct: 352 PIRYFEDGKVYRKEQRGELSGLSRTWSFTIDDGHLFVRPDQIEAEVLSIMDIILDILDTF 411

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
                 V+ +TRPEK  GSD +W+ AE+ ++ VL+      Q+ I+  V  G+GAFYGPK
Sbjct: 412 -SLDYTVQFATRPEKSTGSDEIWEKAESQLEAVLE------QEGIDYVVEEGDGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++  +DA+GR W   T+Q+DFN+P RF+  Y    +E   PVMIHRA++GS ERF  ++
Sbjct: 465 IDFAFEDALGRHWDGPTVQLDFNMPDRFDLTYTGEDNEDHRPVMIHRALYGSYERFFMVL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE++ G  P WL+P Q  +  ++   ++Y +EIA  L      +E + R+ T+  KI+  
Sbjct: 525 IEHYNGKFPPWLAPEQVRILPVSDDNIDYCEEIAAELDD--FRVEIEDRSWTVGKKIQVA 582

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
              K+P +++ GD E +  +I +R       + + L D    L +E
Sbjct: 583 HDDKVPYMMVIGDDEEAAGTISVRDRKEREEKDLELADFEQHLERE 628


>gi|229491972|ref|ZP_04385789.1| threonyl-tRNA synthetase [Rhodococcus erythropolis SK121]
 gi|229321104|gb|EEN86908.1| threonyl-tRNA synthetase [Rhodococcus erythropolis SK121]
          Length = 649

 Score =  543 bits (1399), Expect = e-152,   Method: Composition-based stats.
 Identities = 240/628 (38%), Positives = 366/628 (58%), Gaps = 38/628 (6%)

Query: 45  GKVCDLS-DPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG 103
           G + DLS  P  +  +E +        +VIRHS AH++A+AVQ  +P+ ++ IGP I+DG
Sbjct: 10  GTLKDLSWTPEVDVDVEPVAASTEDGRSVIRHSAAHVLAQAVQKEFPDAKLGIGPPIKDG 69

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYL-SHEKARELFESKKEAYKVEIL 162
           FYYDF  ++PF+ ++LA++EK+M++II     F ++ + S E AR   E   E +K+E++
Sbjct: 70  FYYDFAVDRPFTPEDLAKLEKRMKQIIKGSQRFSRRVVDSIEDAR--VELADEPFKLELI 127

Query: 163 ESIPAKENVTLYRQGE-----------------WFDLCRGPHVRSTGQVKKFFKLMKVAG 205
           +     ++  +   G                  W DLCRGPH+ +T  +  F KL + + 
Sbjct: 128 DDKSGIDDPEIMEVGGNELTIYDNLDPRTGDKIWSDLCRGPHIPTTKHIPAF-KLTRSSA 186

Query: 206 AYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSG 264
           AYWRG+ +   L R+YGTAW + +   +YL  L E+E+RDHRKL  E+DLF   ++ GSG
Sbjct: 187 AYWRGNQDNADLQRVYGTAWESTEAQDEYLELLAEAERRDHRKLGTELDLFSFPDELGSG 246

Query: 265 VIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKC 323
           +  +H KG  I   + +Y R R I+  YE +NTP +   HL++ SGH D YR  MF    
Sbjct: 247 LPVFHPKGGIIRTEMENYSRSRHIEAGYEFVNTPHITKGHLYEVSGHLDWYRDGMFPAMH 306

Query: 324 ADDTIKD-------LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            D+ + +        + + LKPMNCP H  +F    +SYRELP+RL EFGSVYR E SG 
Sbjct: 307 VDEELNEDGTVRKPGQDYYLKPMNCPMHNLIFRARGRSYRELPLRLFEFGSVYRYEKSGV 366

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLS-TRPEKRV 435
           +HGL RVRG TQDDAH++CT+EQM +E       ++++ KD+G +   ++LS   P+K V
Sbjct: 367 IHGLTRVRGMTQDDAHIYCTREQMRDELTTTLQFVLNLLKDYGLDDFYLELSTKNPDKFV 426

Query: 436 GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGT 495
           GSD +W++A   +  V +         +      G  AFYGPK    +KDA+GR WQ  T
Sbjct: 427 GSDDVWEEATATLAEVGEASG------LTLVPDPGGAAFYGPKISVQVKDALGRTWQMST 480

Query: 496 IQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQA 555
           IQ+DFNLP RF   Y  +   K  PVMIHRA+FGSIERF G++ E++ G  P WL+P+Q 
Sbjct: 481 IQLDFNLPERFELEYTGNDGVKTRPVMIHRALFGSIERFFGVLTEHYAGAFPAWLAPVQV 540

Query: 556 IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEAS 615
           +   +  +  ++  ++   LK+  +  E DF ++ +  KIR H+ +K+P +++ G+++  
Sbjct: 541 VGIPVAEAFADHLFDVTKKLKAAGVRAEVDFSDDRMQKKIRNHTTQKVPFMLLAGERDVE 600

Query: 616 ERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             ++  R    T    + + DA+ I+T+
Sbjct: 601 AGAVSFRFRDGTQINGIPVDDAVRIITE 628


>gi|291060195|gb|ADD72930.1| threonyl-tRNA synthetase [Treponema pallidum subsp. pallidum str.
           Chicago]
          Length = 582

 Score =  543 bits (1399), Expect = e-152,   Method: Composition-based stats.
 Identities = 261/579 (45%), Positives = 375/579 (64%), Gaps = 21/579 (3%)

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           +   +L  +RHS AH+MAEAVQ+++P  ++A+GP I+ GFYYDF   +P    +LA IE+
Sbjct: 4   KRSDTLDRLRHSLAHVMAEAVQALFPGTKLAVGPPIDYGFYYDFSPPRPLCDADLAPIEE 63

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
           KM+ I+    PF+K+ +S   A   F+   E +K E++E I A + ++LY  G + DLCR
Sbjct: 64  KMRAILRAGCPFVKEVVSRPDALARFK--DEPFKQELIERISADDTLSLYHSGAFTDLCR 121

Query: 185 GPHVRSTGQVKKF-FKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           GPHV+S   +    FKL  +AGAYWRG+   P L+RIYGTAW ++++L  YL   +E+++
Sbjct: 122 GPHVQSMRDINPHAFKLTSIAGAYWRGNERGPQLTRIYGTAWESEEDLHTYLRMQDEAKR 181

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL   + LFH+ E+  G +FWH +GW ++  +  Y+RR + +  Y E++TP V+ Q
Sbjct: 182 RDHRKLGPALGLFHLDEENPGQVFWHPEGWTLYVAIQQYLRRVMHEDGYAEVHTPFVMPQ 241

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD YRANM+       T  + R+FALKPMNCPGHV +F    +SYR+LP+RL
Sbjct: 242 SLWERSGHWDKYRANMYL------TEGEKRSFALKPMNCPGHVEIFKQKTRSYRDLPLRL 295

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG--F 420
           +EFGS  RNEPSGSLHG+MRVRGF QDDAH+FCT+ Q+ +E  +   L+  +Y DFG   
Sbjct: 296 SEFGSCTRNEPSGSLHGVMRVRGFVQDDAHIFCTEAQIASEVTRFCRLLARVYADFGFAQ 355

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           E+I VK STRPE+R+G DA WD AE  +    +         ++     GEGAFYGPK E
Sbjct: 356 EQIRVKFSTRPEQRIGDDATWDRAERALAEACEAAG------LSYEHAPGEGAFYGPKLE 409

Query: 481 YILKDAIGRDWQCGTIQVDFNLP--SRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           + L D + R+WQCGTIQVD+ LP   R NA YV   +++  PV++HR V GS+ERFIGI+
Sbjct: 410 FALIDTLEREWQCGTIQVDYQLPSCERLNAEYVGEDNQRHMPVILHRTVIGSLERFIGIL 469

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE++ G  P WL+P+QA+V  +  + +EYAQ +A  L +  L ++ D   E +N KIR  
Sbjct: 470 IEHYGGAFPPWLAPVQAVVIPVAPAFLEYAQHVARELCARSLRVQADVSAERMNAKIRTA 529

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
             +K+P ++I G++E   + + +R   +     + L   
Sbjct: 530 QTQKVPYLLIVGERELRAQQVAVRPR-TGPQHSMGLSAF 567


>gi|15639823|ref|NP_219273.1| threonyl-tRNA synthetase [Treponema pallidum subsp. pallidum str.
           Nichols]
 gi|189026061|ref|YP_001933833.1| threonyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14]
 gi|6094415|sp|O83809|SYT_TREPA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|238689347|sp|B2S475|SYT_TREPS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|3323150|gb|AAC65804.1| threonyl-tRNA synthetase (thrS) [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189018636|gb|ACD71254.1| threonyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14]
          Length = 592

 Score =  543 bits (1399), Expect = e-152,   Method: Composition-based stats.
 Identities = 261/579 (45%), Positives = 375/579 (64%), Gaps = 21/579 (3%)

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           +   +L  +RHS AH+MAEAVQ+++P  ++A+GP I+ GFYYDF   +P    +LA IE+
Sbjct: 14  KRSDTLDRLRHSLAHVMAEAVQALFPGTKLAVGPPIDYGFYYDFSPPRPLCDADLAPIEE 73

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
           KM+ I+    PF+K+ +S   A   F+   E +K E++E I A + ++LY  G + DLCR
Sbjct: 74  KMRAILRAGCPFVKEVVSRPDALARFK--DEPFKQELIERISADDTLSLYHSGAFTDLCR 131

Query: 185 GPHVRSTGQVKKF-FKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           GPHV+S   +    FKL  +AGAYWRG+   P L+RIYGTAW ++++L  YL   +E+++
Sbjct: 132 GPHVQSMRDINPHAFKLTSIAGAYWRGNERGPQLTRIYGTAWESEEDLHTYLRMQDEAKR 191

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRKL   + LFH+ E+  G +FWH +GW ++  +  Y+RR + +  Y E++TP V+ Q
Sbjct: 192 RDHRKLGPALGLFHLDEENPGQVFWHPEGWTLYVAIQQYLRRVMHEDGYAEVHTPFVMPQ 251

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD YRANM+       T  + R+FALKPMNCPGHV +F    +SYR+LP+RL
Sbjct: 252 SLWERSGHWDKYRANMYL------TEGEKRSFALKPMNCPGHVEIFKQKTRSYRDLPLRL 305

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG--F 420
           +EFGS  RNEPSGSLHG+MRVRGF QDDAH+FCT+ Q+ +E  +   L+  +Y DFG   
Sbjct: 306 SEFGSCTRNEPSGSLHGVMRVRGFVQDDAHIFCTEAQIASEVTRFCRLLARVYADFGFAQ 365

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           E+I VK STRPE+R+G DA WD AE  +    +         ++     GEGAFYGPK E
Sbjct: 366 EQIRVKFSTRPEQRIGDDATWDRAERALAEACEAAG------LSYEHAPGEGAFYGPKLE 419

Query: 481 YILKDAIGRDWQCGTIQVDFNLP--SRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           + L D + R+WQCGTIQVD+ LP   R NA YV   +++  PV++HR V GS+ERFIGI+
Sbjct: 420 FALIDTLEREWQCGTIQVDYQLPSCERLNAEYVGEDNQRHMPVILHRTVIGSLERFIGIL 479

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE++ G  P WL+P+QA+V  +  + +EYAQ +A  L +  L ++ D   E +N KIR  
Sbjct: 480 IEHYGGAFPPWLAPVQAVVIPVAPAFLEYAQHVARELCARSLRVQADVSAERMNAKIRTA 539

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
             +K+P ++I G++E   + + +R   +     + L   
Sbjct: 540 QTQKVPYLLIVGERELRAQQVAVRPR-TGPQHSMGLSAF 577


>gi|70993228|ref|XP_751461.1| threonyl-tRNA synthetase [Aspergillus fumigatus Af293]
 gi|66849095|gb|EAL89423.1| threonyl-tRNA synthetase, putative [Aspergillus fumigatus Af293]
 gi|159125604|gb|EDP50721.1| threonyl-tRNA synthetase, putative [Aspergillus fumigatus A1163]
          Length = 737

 Score =  543 bits (1399), Expect = e-152,   Method: Composition-based stats.
 Identities = 222/673 (32%), Positives = 357/673 (53%), Gaps = 52/673 (7%)

Query: 9   FPDGSIKNFP---VHATGSDVAESISRSLAKKAVAVAING-KVCDLSDPVR-EGSIEIIT 63
             DG+    P      T       + + ++   V   I+G ++ DL+ P+  + ++  + 
Sbjct: 75  LGDGNPSPVPAKAWETTPGSFLRDVPKDISANVVLAKIDGKELWDLNRPLERDCTVSYVP 134

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK--EQPFSSDELAQ 121
            + P    V  HS AH + EA +  +    ++ GP    GF+YD      +     +   
Sbjct: 135 FDSPEGREVFWHSSAHCLGEACECEY-GCLLSHGPPTPQGFFYDMAMPDNRVVRESDWPA 193

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           ++ +   I      F +  ++ E  +++F   K  YK+  ++ +   E  T+YR G   D
Sbjct: 194 LDSRASRIFKEKQSFDRLEVTKENLKKMFAYSK--YKLHYIDKLVTGEKSTVYRCGTLVD 251

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+++TG++K F K+M+ + AY+ GD N   L RI G A+  ++++ ++L FLEE+
Sbjct: 252 LCRGPHIQNTGKIKTF-KIMQNSSAYFLGDQNNDSLQRIRGVAFPDKKQMQEHLKFLEEA 310

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVL 300
           EKR+H ++ ++ +LF   E   G  F    G KIF  L + +R + +   Y+E+ TP + 
Sbjct: 311 EKRNHLRIGKDQELFFFDEVSPGCPFLLPNGTKIFNALQALLRAEYRKRGYQEVQTPNMY 370

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D  +W++SGHW  Y+ +MF +        + R +ALKPMNCPGH  +F H  +SYRELP+
Sbjct: 371 DVGIWKRSGHWAHYKDDMFKLDV------EKREWALKPMNCPGHFVLFGHRERSYRELPL 424

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+A+FG ++RNE SG+L GL RVR F QDD H+FCT++Q+ +E   + + + SIY  FGF
Sbjct: 425 RIADFGVLHRNEASGALSGLTRVRKFQQDDTHIFCTQDQIASEIEGLFDFLQSIYGLFGF 484

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
              + KLSTRPEK +G    W+ AE  +K  +   K       +  +  G+GAFYGPK +
Sbjct: 485 TFKL-KLSTRPEKYLGDLETWNYAEEQLKSAMTKFKGK-----DWTIDEGDGAFYGPKID 538

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH---------------------SEKCH 519
             + DA+ R++QC TIQ+D+  P  F   Y+ +                        +  
Sbjct: 539 ITIADALKREFQCATIQLDYQAPINFKLEYMTNEKGQAVMEDSKNEGETKSNEPGPGRAR 598

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH 579
           PV+IHRA+ GS ERF+GI+IE+F G  P W+SP Q ++  +  +  +Y +E+  +L+   
Sbjct: 599 PVVIHRAIIGSFERFLGILIEHFGGKWPFWISPRQILIVPVMPAVNDYVEELQQILRGDK 658

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK----VSLL 635
           L+++ D    T+  KIR   + +   I + G +E   RS+ IR      TQ     V L 
Sbjct: 659 LNVDIDISGNTMQKKIRTGQLAQYNFIFVVGAQEKESRSVNIRNRDDPATQHKGVMVPLE 718

Query: 636 DA---IPILTKES 645
           +A   +  L KE 
Sbjct: 719 EARQKLRALRKER 731


>gi|15827147|ref|NP_301410.1| threonyl-tRNA synthetase [Mycobacterium leprae TN]
 gi|221229625|ref|YP_002503041.1| threonyl-tRNA synthetase [Mycobacterium leprae Br4923]
 gi|2501058|sp|O07151|SYT_MYCLE RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|254783529|sp|B8ZUG9|SYT_MYCLB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|2193902|emb|CAB09620.1| ThrS [Mycobacterium leprae]
 gi|13092695|emb|CAC29964.1| threonyl-tRNA synthetase [Mycobacterium leprae]
 gi|219932732|emb|CAR70549.1| threonyl-tRNA synthetase [Mycobacterium leprae Br4923]
          Length = 702

 Score =  543 bits (1398), Expect = e-152,   Method: Composition-based stats.
 Identities = 244/661 (36%), Positives = 367/661 (55%), Gaps = 46/661 (6%)

Query: 16  NFPVHATGSDVAESISR------SLAKKAVAVA-INGKVCDLSD-PVREGSIEIITPEDP 67
             P  +T    A ++S             V V   +GK+ DLS  P  +  +  +     
Sbjct: 32  QVPAGSTA---AAAVSEAGLPTHGAPDAIVVVRDADGKLRDLSWVPDVDVEVTPVPVNTD 88

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQ 127
              +VIRHS AH++A+AVQ ++P+ ++ IGP I DGFYYDFD  +PF+ ++L  +EK+M+
Sbjct: 89  DGRSVIRHSTAHVLAQAVQDLFPQAKLGIGPPITDGFYYDFDVAEPFTPEDLKALEKRMR 148

Query: 128 EIIARDSPFLKQYL-SHEKARELFESKKEAYKVEILESIPAK--------ENVTLY---- 174
           +I+     F ++   S E+AR   E   E YK+E+++             + +T Y    
Sbjct: 149 QIVKEGQLFSRRIYESKEQAR--TEWAGEPYKLELVDDESGDAEIMEVGGDELTAYDNLN 206

Query: 175 -RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQEL 231
            R GE  W DLCRGPH+ +T  +  F KL + + AYWRG+     L RIYGTAW +Q+ L
Sbjct: 207 ARNGERIWGDLCRGPHIPTTKHIPAF-KLTRSSAAYWRGNQKNASLQRIYGTAWESQEAL 265

Query: 232 TQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
            ++L  + E+++RDHRKL  E+DLF   ++ GSG+  +H KG  + + +  Y RRK  + 
Sbjct: 266 DRHLEMITEAQRRDHRKLGIELDLFSFPDEIGSGLAIFHPKGSIVRREMEEYSRRKHIEA 325

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD-------LRTFALKPMNCP 342
            Y+ +NTP +    L+  SGH D Y   +F     D    D        + + LKPMNCP
Sbjct: 326 GYQFVNTPHITKAQLFHTSGHLDWYAEGIFPPMHLDAEHNDDGTVRKPGQDYYLKPMNCP 385

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN 402
            H  +F+   +SYRELP+RL EFG++YR E SG +HGL R RGFT DD+H+FCT+EQ+  
Sbjct: 386 MHTLIFSSRGRSYRELPLRLFEFGTIYRYEKSGVVHGLTRARGFTMDDSHIFCTREQLHC 445

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDTIKNSSQD 461
           E   +   ++ +  D+G E   ++LST+  +  VGS+ +W++A   +  V +        
Sbjct: 446 ELASLLRFVLDLLGDYGLEDFYLELSTKDPEKFVGSEEIWEEATAALAEVAE------NS 499

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
            +      G  AFYGPK    ++DA+GR WQ  TIQVDFN P RF   Y ++   +  PV
Sbjct: 500 TLPLVPDPGGAAFYGPKISVQVRDALGRSWQMSTIQVDFNFPERFALEYTSADGTRQRPV 559

Query: 522 MIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLS 581
           MIHRA+FGSIERF GI+ E++ G  P WL+PIQ +   +T   V Y +E+A  LKS  + 
Sbjct: 560 MIHRALFGSIERFFGILTEHYAGAFPAWLAPIQVVGIPVTGEHVSYLEEVAAQLKSCGVR 619

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            E D  ++ +  KI  H+ +K+P +++ GD++    S+  R    T    V+   A+  +
Sbjct: 620 TEVDVSDDRMAKKIVRHTNQKVPFMLLAGDRDVRTGSVSFRFGDRTQINGVARDSAVEAI 679

Query: 642 T 642
            
Sbjct: 680 V 680


>gi|320093816|ref|ZP_08025661.1| threonine--tRNA ligase [Actinomyces sp. oral taxon 178 str. F0338]
 gi|319979249|gb|EFW10747.1| threonine--tRNA ligase [Actinomyces sp. oral taxon 178 str. F0338]
          Length = 669

 Score =  543 bits (1398), Expect = e-152,   Method: Composition-based stats.
 Identities = 232/669 (34%), Positives = 354/669 (52%), Gaps = 43/669 (6%)

Query: 1   MPS-DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS- 58
           MP+ D+ +   DG         TG+           +  VA+ ++G   DL   +  G+ 
Sbjct: 1   MPTFDLVI---DGQATTIEAGTTGTAWYAG-----DRSVVAIKVDGAPRDLDTELEAGTR 52

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           +E I  + P  L ++RHS  H++A+AVQ ++P+V + IGP I DGFYYDF      + + 
Sbjct: 53  VEAIALDSPDGLDILRHSATHVLAQAVQDVFPDVDLGIGPFITDGFYYDFGNIDAVTPEL 112

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK---------- 168
           L  +EK+M+ I+     F+++ +S ++AR   E   + YK+E++ +              
Sbjct: 113 LRDLEKRMKRIVKEGQRFVRREISEDEAR--LELADQPYKLELVTTKGKGAEGASVEVGG 170

Query: 169 ------ENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYG 222
                 +NV       W DLCRGPH+ ST  +   F L K + AYW+GD N   L RIYG
Sbjct: 171 GGLTMYDNVRRDGTVAWKDLCRGPHLPSTKLIGNGFALTKSSAAYWKGDQNGDQLQRIYG 230

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLIS 281
           TAW ++ +L  Y   L+E+E+RDHR+L  E+DLF   E+ G G+  +H KG  + + +  
Sbjct: 231 TAWASKDDLVAYQERLKEAERRDHRRLGAELDLFSFPEEIGPGLPVFHPKGGVLKRVMED 290

Query: 282 YMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
           Y+R   I + ++ + TP +    L+  SGH   Y   MF          + + + LK MN
Sbjct: 291 YVREAHIANGFQYVGTPHISKAELFHTSGHLPYYADGMFPPMDD-----EGQAYYLKAMN 345

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
           CP H  +F    +SYRELP+R  EFG+VYRNE SG L GL RVR  TQDD+H +CT EQ 
Sbjct: 346 CPMHNLIFRSRGRSYRELPLRFFEFGTVYRNEKSGVLQGLTRVRSITQDDSHSYCTPEQA 405

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK------RVGSDALWDDAENIMKGVLDT 454
             E   +   ++++ KDFG E   +++STR E        +GSD  W DA  I+  +   
Sbjct: 406 PGEVRHLLTFVLTLLKDFGMEDFYLEVSTRDEDGAKKDKFIGSDEQWADATRILADIAAE 465

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH 514
                ++ +      G  AFYGPK     KDAI R WQ  TIQ DFN P RF   Y  + 
Sbjct: 466 CAQ--ENGLRVVDDPGGAAFYGPKISVQAKDAIRRTWQMSTIQYDFNQPHRFGLEYTAAD 523

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANL 574
             +  PVMIH A FG+IERFIG++ E++ G  P WL+P+Q  +  + S+  +Y +E+A  
Sbjct: 524 GARHEPVMIHSAKFGAIERFIGVLTEHYAGAFPAWLAPVQVRLVPVASAFDDYVEEVAAK 583

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           L+   + +ETD  ++    KIR  + +K+P  +I G ++A   ++  R    +    + +
Sbjct: 584 LRERGIRVETDLSDDRFGKKIRNAAKEKVPFTLIAGGEDAEAGAVSFRLRDGSQHNGIPV 643

Query: 635 LDAIPILTK 643
             A+ ++ +
Sbjct: 644 DRAVELIAR 652


>gi|317969695|ref|ZP_07971085.1| threonyl-tRNA synthetase [Synechococcus sp. CB0205]
          Length = 590

 Score =  543 bits (1398), Expect = e-152,   Method: Composition-based stats.
 Identities = 250/587 (42%), Positives = 350/587 (59%), Gaps = 19/587 (3%)

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T E  + L + RHS +H+MA AVQ ++P+ QV IGP  E+GFYYDFD   PF+  +L  I
Sbjct: 6   TSESEQLLRI-RHSMSHVMAMAVQRLFPKAQVTIGPWTENGFYYDFDNPDPFTEADLKAI 64

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG-EWFD 181
           +K+M ++I +  P  +  +S  +A    +++ E YK+EIL  I  +E ++LY  G +W+D
Sbjct: 65  KKEMIKLINKKLPLERLEVSRAEAESRIQAQNEPYKLEILAGI--QEPISLYTLGEDWWD 122

Query: 182 LCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           LC GPHV +T ++  K F L  VAGAYWRGD N   L RIYGTAW T ++L++Y    EE
Sbjct: 123 LCAGPHVSNTKELNAKAFDLESVAGAYWRGDENNAQLQRIYGTAWETPEQLSEYKRRQEE 182

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           +++RDHR++  ++DLF I ++   G++FWH +G ++   + +  R       YE + TP 
Sbjct: 183 AKRRDHRRIGTDLDLFSIEDEAGAGLVFWHPRGARMRLLIENLWRELHFNAGYELLYTPH 242

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V D  LW+ SGH D Y  +MF     D+     R + LKPMNCP HV  +   L+SYREL
Sbjct: 243 VADISLWKTSGHLDFYSESMFGPMQVDE-----REYQLKPMNCPFHVLTYASTLRSYREL 297

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R AE G+VYR E  G +HGLMRVRGFTQDDAHVFC  EQ+ +E L I +L   I   F
Sbjct: 298 PIRWAELGTVYRYERPGVMHGLMRVRGFTQDDAHVFCLPEQISDEILAILDLTEQILSTF 357

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
            F    + LSTRPEK +G DA+WD A   +   L+      +      +  G GAFYGPK
Sbjct: 358 DFRNYEINLSTRPEKSIGEDAVWDLATQGLIEALE------RKGWAYKIDEGGGAFYGPK 411

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +  ++DAIGR WQC T+Q+DFNLP RF+  YV +   +  P+MIHRA+FGS+ERF GIM
Sbjct: 412 IDLKIEDAIGRMWQCSTVQLDFNLPERFDLEYVAADGSRQRPIMIHRAIFGSLERFFGIM 471

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
            EN+ G+ P WL+P Q  +  +T     YA+ +A  LK+  +    D   + +   IR  
Sbjct: 472 TENYAGDFPFWLAPEQIRLLPVTDEVTGYAESVAAALKAAGVRASVDHSGDRLGKLIRNG 531

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
              KIP++ + G KEA   +I +R         + L   +    KE+
Sbjct: 532 EQMKIPVLGVIGAKEAEGGTISLRSRREGDLGSIELETVVAA-AKEA 577


>gi|256825369|ref|YP_003149329.1| threonyl-tRNA synthetase [Kytococcus sedentarius DSM 20547]
 gi|256688762|gb|ACV06564.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Kytococcus
           sedentarius DSM 20547]
          Length = 660

 Score =  543 bits (1398), Expect = e-152,   Method: Composition-based stats.
 Identities = 231/670 (34%), Positives = 360/670 (53%), Gaps = 48/670 (7%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEI 61
           + I LT  +G+ +      TG+D+         ++ VA  +NG++ DL   V +G  +E 
Sbjct: 2   APISLTV-NGASRTAETGTTGTDLF-----GDDRRVVATRVNGELRDLYREVADGDEVEA 55

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +  ++P  L ++RHS AH++A+AVQ  + + ++ IGP I DGFYYDFD  +PF+ ++L +
Sbjct: 56  VLIDEPDGLDILRHSAAHVLAQAVQQEFADAKLGIGPPITDGFYYDFDVAEPFTPEDLKK 115

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL------------------- 162
           + K MQ II     F+++ +S   A    E   E YKVE++                   
Sbjct: 116 LSKTMQRIINEGQTFVRREVS--DADAQVELAGEPYKVELIGLKGGSAEEAAEGASAEVG 173

Query: 163 -ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIY 221
              +   +NV       W DLCRGPH+ ST  +   F L + A AYWRG    P L R+Y
Sbjct: 174 GAQLTIYDNVRKDGTVAWGDLCRGPHLPSTKLIGNGFALTRSAAAYWRGSEKNPQLQRVY 233

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLI 280
           GTAW +++EL  Y   L E+E+RDHRKL  EMDL+   E+ G G+  +H KG  + +T+ 
Sbjct: 234 GTAWPSKEELKAYQERLAEAERRDHRKLGAEMDLYSFPEEVGPGLPVFHPKGAILRRTME 293

Query: 281 SYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPM 339
            Y+  R +++ +  + TP +  + L+  SGH   Y   M       +   D + + +K M
Sbjct: 294 DYVWKRHVEEGFSYVTTPHLSKEGLFHTSGHLPYYADGMMP-----ELDDDGQAYRIKAM 348

Query: 340 NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQ 399
           NCP H  ++    +SYRELP+R  EFG+VYRNE SG L GL RVR  TQDD+H + T+EQ
Sbjct: 349 NCPMHNLIYRSQQRSYRELPLRYFEFGTVYRNEKSGVLQGLTRVRMITQDDSHSYVTREQ 408

Query: 400 MFNECLKIHNLIISIYKDFGFEKIMVKLSTR------PEKRVGSDALWDDAENIMKGVLD 453
              E   + + ++S+ +DFG +   ++LSTR       +K +G+D  W +A  +++ V  
Sbjct: 409 APGEVKHLLDFVLSLLRDFGMDDYYLELSTRAEEGDKKDKFIGTDEQWAEATAVLEQV-- 466

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS 513
               +++  +      G  A+YGPK     +DAIGR WQ  TIQ DFN P RF   Y  +
Sbjct: 467 ----ATETGLELVPDPGGAAYYGPKISVQARDAIGRTWQMSTIQYDFNQPERFGLEYSAA 522

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIAN 573
              +  PVMIH A FGSIERFIG+++E++ G  P+WL+P+Q +   +      Y +++  
Sbjct: 523 DGTRQQPVMIHSAKFGSIERFIGVLVEHYAGQFPVWLAPVQVLGVPVAEDFQPYLEDVLA 582

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            +++  +  E D  ++    KIR  S  K+P  +I G ++    ++  R    +    V 
Sbjct: 583 QMRAQGIRTEIDASDDRFPKKIRNASKSKVPFTLIAGGEDRDAGAVSFRFRDGSQENGVP 642

Query: 634 LLDAIPILTK 643
           + DAI  + +
Sbjct: 643 VADAIARIRE 652


>gi|269795047|ref|YP_003314502.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Sanguibacter
           keddieii DSM 10542]
 gi|269097232|gb|ACZ21668.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Sanguibacter
           keddieii DSM 10542]
          Length = 676

 Score =  543 bits (1398), Expect = e-152,   Method: Composition-based stats.
 Identities = 244/668 (36%), Positives = 369/668 (55%), Gaps = 44/668 (6%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI-EII 62
           D+ +T  DG+        TG+++         K  V V + G++ DL+    EG + E +
Sbjct: 13  DVTITL-DGTQTTVTTATTGTELFAD-----RKDVVVVRVGGELKDLASTFTEGDVVEPV 66

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T + P  L V+RHS AH++A+AVQ + P  ++ IGP I DGFYYDFD  +PF+ ++L  +
Sbjct: 67  TIDSPDGLDVLRHSAAHVLAQAVQQVNPTAKLGIGPPITDGFYYDFDVAEPFTPEDLKAL 126

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVT---------- 172
           EK M  I+     F ++ ++  +A  L +   E YK+E++    + +             
Sbjct: 127 EKAMMRIVKEGQTFRRRVVT--EAEALVDLADEPYKIELVGLKGSSDTAGEGASVEVGAG 184

Query: 173 -------LYRQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
                  + R G+  W DLCRGPH+ ST  +   F+LM+ A AYWRG    P L R+YGT
Sbjct: 185 ELSIYQNVRRNGDVAWEDLCRGPHLPSTRLIGNGFQLMRSAAAYWRGSEKNPQLQRVYGT 244

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISY 282
           AW T+ EL  +L  L E+E+RDHR+L  E+DLF   ++ GSG+  +H KG  I   +  Y
Sbjct: 245 AWPTKDELKAHLERLAEAERRDHRRLGSELDLFSFPDEIGSGLAVFHPKGGIIRSEMEQY 304

Query: 283 MR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTI-------KDLRTF 334
            R R +++ Y  +NTP +  + L+  SGH D Y   M+     D+ +       K  + +
Sbjct: 305 SRKRHVEEGYSFVNTPHITKEQLFLTSGHLDWYADGMYPPMHLDEEVDADGTVRKAGQNY 364

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
            LKPMNCP H  +F    +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDDAH++
Sbjct: 365 YLKPMNCPMHNLIFASRGRSYRELPLRLFEFGTVYRYEKSGVVHGLARGRGFTQDDAHIY 424

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR-VGSDALWDDAENIMKGVLD 453
           CT+EQM +E     N ++ + KD+G +   ++LSTR  ++ VG+D  W++A   ++ V  
Sbjct: 425 CTREQMKDELTTSLNFVLGLLKDYGLDDFYLELSTRDPEKSVGTDDAWEEATRTLEEVAV 484

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS 513
                    ++     G  AFYGPK     KDAIGR WQ  TIQ+DFNLP +F+  +  +
Sbjct: 485 ASG------LDLVPDPGGAAFYGPKISVQAKDAIGRTWQMSTIQLDFNLPEKFDLEFAAA 538

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIAN 573
              +  PVMIHRA+FGSIERF  ++ E++ G  P WL+P+Q +   +     +Y  ++  
Sbjct: 539 DGTRQRPVMIHRALFGSIERFFAVLTEHYAGAFPAWLAPVQVLAVPVAEPFNDYLADVVA 598

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            L+   +  + D  ++    KIR  S +KIP ++I G ++A   ++  R         V 
Sbjct: 599 QLRKAGVRADLDDSSDRFAKKIRTASTQKIPFVLIAGGEDAEAGAVSFRYRDGRQENGVP 658

Query: 634 LLDAIPIL 641
           + +AI  +
Sbjct: 659 VAEAIERV 666


>gi|269219392|ref|ZP_06163246.1| threonine--tRNA ligase [Actinomyces sp. oral taxon 848 str. F0332]
 gi|269211185|gb|EEZ77525.1| threonine--tRNA ligase [Actinomyces sp. oral taxon 848 str. F0332]
          Length = 709

 Score =  543 bits (1398), Expect = e-152,   Method: Composition-based stats.
 Identities = 229/690 (33%), Positives = 359/690 (52%), Gaps = 54/690 (7%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSD---PVREG 57
           MP ++ +   DG+        +G +          K  VA+ ++G++ DL+     + EG
Sbjct: 1   MPVNLSI---DGNATAIEGPRSGIEFFAD-----RKNVVALRVDGELKDLATDLASLPEG 52

Query: 58  SI-EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSS 116
           ++ E +       L ++RHS AH++A+AVQ ++P+  + IGP I DGFYYDF      + 
Sbjct: 53  AVVEGVDVSSDDGLNILRHSTAHVLAQAVQQVFPDANLGIGPFITDGFYYDFGNIDAVTP 112

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN------ 170
           + L  +EK+M+ I+     F ++ ++        E   + YK+E++ +  A         
Sbjct: 113 ELLRDLEKRMKRIVKEGQTFRRREIADA--DAAAELAGQPYKLELVGTKGAGAEGASVEV 170

Query: 171 ----VTLYRQG------EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRI 220
               +T+Y          W DLCRGPH+ ST  +   F L K + AYW+GD     L RI
Sbjct: 171 GGAALTMYDNCSRDGSVVWTDLCRGPHLPSTRFIGNGFALTKASAAYWKGDQAGDRLQRI 230

Query: 221 YGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTL 279
           YGTAW T+ EL  Y   + E+E+RDHR+L  E+DLF   E+ G G++ +H KG  +   +
Sbjct: 231 YGTAWPTKDELAAYQKRIAEAERRDHRRLGAELDLFSFPEEIGPGLVVFHPKGGILRHIV 290

Query: 280 ISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT-------IKDL 331
            SY+ RR +++ ++ ++TP++    L+  SGH   Y   MF     D+         +  
Sbjct: 291 ESYVTRRHLEEGFDFVHTPEISKGGLFHTSGHLPYYADTMFPPMKVDEERGADGEVTRAG 350

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
           + + LK MNCP H  +F    +SYRELP+R  E G  YR E SG +HGL R+RGFTQDD+
Sbjct: 351 QDYYLKAMNCPMHNLIFRSRGRSYRELPLRFFEMGHDYRYEKSGVVHGLTRMRGFTQDDS 410

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP-----EKRVGSDALWDDAEN 446
           H +CT EQ   E   + N  + I +DFG     ++LSTR      +K +GSD  W  A  
Sbjct: 411 HTYCTPEQAKGEIEMLLNFFLDILRDFGLTDFYLELSTRDEGKKKDKFIGSDEDWAAATR 470

Query: 447 IMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF 506
           I++             ++     G  AFYGPK    +KDA+GR WQ  T+Q DFN P RF
Sbjct: 471 ILEEACAATG------LDLVPDPGGAAFYGPKVSVQVKDALGRTWQMSTVQYDFNQPERF 524

Query: 507 NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVE 566
           +  Y      +  PVMIH A  GS+ERFIG++ E++ G  P WL+P+QA +  +  +   
Sbjct: 525 DLEYTAPDGSRRRPVMIHSAKLGSVERFIGVLTEHYAGAFPAWLAPVQARLVPVAEAFNP 584

Query: 567 YAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS 626
           Y +E+A  L++  + ++ D  ++    KIR  + +KIP  +I G ++A   ++  R    
Sbjct: 585 YCEEVAAKLRAAGIRVDVDLSDDRFGKKIRNAAKEKIPFTLIAGGEDAEAEAVSFRYRDG 644

Query: 627 TTTQKVSLLDAIP----ILTKESLPPDCQK 652
                VS+ +A+     ++ +    P C++
Sbjct: 645 HQENGVSVDEAVAHIGRVVARRVNDPACER 674


>gi|119499848|ref|XP_001266681.1| threonyl-tRNA synthetase, putative [Neosartorya fischeri NRRL 181]
 gi|119414846|gb|EAW24784.1| threonyl-tRNA synthetase, putative [Neosartorya fischeri NRRL 181]
          Length = 737

 Score =  542 bits (1397), Expect = e-152,   Method: Composition-based stats.
 Identities = 222/673 (32%), Positives = 357/673 (53%), Gaps = 52/673 (7%)

Query: 9   FPDGSIKNFP---VHATGSDVAESISRSLAKKAVAVAING-KVCDLSDPVR-EGSIEIIT 63
             DG+    P      T       + + ++   V   I+G ++ DL+ P+  + ++  + 
Sbjct: 75  LGDGNPSPVPAKAWETTPGSFLRDVPKDISANVVLAKIDGKELWDLNRPLERDCTVSYVL 134

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK--EQPFSSDELAQ 121
            + P    V  HS AH + EA +  +    ++ GP    GF+YD      +     +   
Sbjct: 135 FDSPEGREVFWHSSAHCLGEACECEY-GCLLSHGPPTPQGFFYDMAMPDNRVVRESDWPA 193

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           ++ +   I      F +  ++ E  +++F   K  YK+  ++ +   E  T+YR G   D
Sbjct: 194 LDSRASRIFKEKQSFDRLEVTKENLKKMFAYSK--YKLHYIDKLVTGEKSTVYRCGTLVD 251

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+++TG++K F K+M+ + AY+ GD     L RI G A+  ++++ ++L FLEE+
Sbjct: 252 LCRGPHIQNTGKIKTF-KIMQNSSAYFLGDQTNDSLQRIRGVAFPDKKQMQEHLKFLEEA 310

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVL 300
           EKR+H ++ ++ +LF   E   G  F    G KIF  L + +R + +   Y+E+ TP + 
Sbjct: 311 EKRNHLRIGKDQELFFFDEVSPGCPFLLPNGTKIFNALQALLRAEYRKRGYQEVQTPNMY 370

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D  +W++SGHW  Y+ +MF +        + R +ALKPMNCPGH  +F H  +SYRELP+
Sbjct: 371 DVGIWKRSGHWAHYKDDMFKLDV------EKREWALKPMNCPGHFVLFGHRERSYRELPL 424

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+A+FG ++RNE SG+L GL RVR F QDD H+FCT++Q+ +E   + + + SIY  FGF
Sbjct: 425 RIADFGVLHRNEASGALSGLTRVRKFQQDDTHIFCTQDQIASEIEGLFDFLQSIYGLFGF 484

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
              + KLSTRPEK +G    W+ AE  +K  +   K       +  +  G+GAFYGPK +
Sbjct: 485 TFKL-KLSTRPEKYLGELETWNYAEEQLKSAMTKFKGK-----DWTIDEGDGAFYGPKID 538

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN------------SHSE---------KCH 519
             + DA+ R++QC TIQ+D+  P  F   Y+             +  E         +  
Sbjct: 539 ITIADALKREFQCATIQLDYQAPINFKLEYMTNEKGQAVMEESKTEGETKSNEPGPGRAR 598

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH 579
           PV+IHRA+ GS ERF+GI+IE+F G  P W+SP Q ++  +  +  +Y +E+  +L+   
Sbjct: 599 PVVIHRAIIGSFERFLGILIEHFGGKWPFWISPRQILIVPVMPAVNDYVEELQQILRGDK 658

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK----VSLL 635
           L+++ D    T+  KIR   + +   I + G +E   RS+ IR      TQ     V L 
Sbjct: 659 LNVDIDISGNTMQKKIRTGQLAQYNFIFVVGAQEKESRSVNIRNRDDPATQNKGVMVPLE 718

Query: 636 DA---IPILTKES 645
           +A   +  L KE 
Sbjct: 719 EARQKLRALRKER 731


>gi|325972697|ref|YP_004248888.1| threonyl-tRNA synthetase [Spirochaeta sp. Buddy]
 gi|324027935|gb|ADY14694.1| threonyl-tRNA synthetase [Spirochaeta sp. Buddy]
          Length = 581

 Score =  542 bits (1397), Expect = e-152,   Method: Composition-based stats.
 Identities = 241/579 (41%), Positives = 354/579 (61%), Gaps = 16/579 (2%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQ 127
             L+ IRHS AH+MAEAV  ++P  Q+ IGP I++GFYYDFD  +   +D+L +I  +M+
Sbjct: 8   EKLSRIRHSMAHVMAEAVLQMFPSAQITIGPAIDNGFYYDFDLPRQLVNDDLEEIAARMK 67

Query: 128 EIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPH 187
            IIA   PF++  +S  +AR+  +   + YK+E+L++I   E V+LY QG + DLCRGPH
Sbjct: 68  AIIAEGKPFVRTVVSRAEARK--QFADQTYKLELLDAIAEGEEVSLYSQGGFTDLCRGPH 125

Query: 188 VRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDH 246
           V ST ++K   FKLM +AGAYWRG    PML+RIYGTAW   ++L  YL  LE+ EKRDH
Sbjct: 126 VESTKELKADAFKLMSIAGAYWRGKETNPMLTRIYGTAWANAKDLRLYLQHLEDVEKRDH 185

Query: 247 RKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHL 304
           RKL +E+DLF + E+ G G+++WH  G +I Q++ ++ R     + YE + TP +    L
Sbjct: 186 RKLGKELDLFSLHEEAGPGLVYWHPMGARIRQSIENFWRSEHYANGYEMVYTPHIGRSWL 245

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W+ SGH D Y+  M+          D   + +KPMNCP H+ ++ +   SYR+LP R AE
Sbjct: 246 WETSGHLDFYKDGMYPPMEM-----DKSDYYVKPMNCPFHIMIYKNSKHSYRDLPCRWAE 300

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
            G+VYR E +G++HGLMRVRGFTQDDAH+F T +QM +E L++    + +   FGF +I 
Sbjct: 301 LGTVYRYEKAGAMHGLMRVRGFTQDDAHLFVTPDQMNDEILEVLRFSLHMLHSFGFTEIN 360

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
             LST+PEK VG  A W  A   ++  +        + ++  +  G GAFYGPK +  +K
Sbjct: 361 AYLSTKPEKSVGDPARWAAATEALRQAIVA------EGLSYEIDEGGGAFYGPKIDLKIK 414

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           DAIGR+WQ  T+Q DFN P RF+  +V+    +  P MIHRA+ GSIERF G++IE++ G
Sbjct: 415 DAIGREWQLSTVQFDFNEPERFDMTFVDKDGVEKRPYMIHRALLGSIERFFGVLIEHYAG 474

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P WLSP Q  +  +  +  +YA+++   L+     +  D  ++ +N KIR     KIP
Sbjct: 475 AFPPWLSPEQIKLIPVGENFFDYAKDLEKRLRKEGFRVSADLGDDRMNAKIRNAQQLKIP 534

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            ++I G++EA    + +R         +S    I ++ +
Sbjct: 535 YMVIIGEREAQNDQVSVRLRTGKQENGLSTQAFIEMVKQ 573


>gi|215446866|ref|ZP_03433618.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis T85]
 gi|289758745|ref|ZP_06518123.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis T85]
 gi|289714309|gb|EFD78321.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis T85]
          Length = 692

 Score =  542 bits (1397), Expect = e-152,   Method: Composition-based stats.
 Identities = 248/663 (37%), Positives = 369/663 (55%), Gaps = 42/663 (6%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVA-INGKVCDLSD-PVREGSI 59
           PS  ++  P G+     V   G        R      V V   +G + DLS  P  +  I
Sbjct: 16  PSQARIRVPAGTTAATAVGEAGLP-----RRGTPDAIVVVRDADGNLRDLSWVPDVDTDI 70

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
             +        +VIRHS AH++A+AVQ ++P+ ++ IGP I DGFYYDFD  +PF+ ++L
Sbjct: 71  TPVAANTDDGRSVIRHSTAHVLAQAVQELFPQAKLGIGPPITDGFYYDFDVPEPFTPEDL 130

Query: 120 AQIEKKMQEIIARDSPFLKQYL-SHEKARELFESKKEAYKVEILESIPAK--------EN 170
           A +EK+M++I+     F ++   S E+AR   E   E YK+E+++             + 
Sbjct: 131 AALEKRMRQIVKEGQLFDRRVYESTEQARA--ELANEPYKLELVDDKSGDAEIMEVGGDE 188

Query: 171 VTLY-------RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
           +T Y       R+  W DLCRGPH+ +T  +  F KL + + AYWRGD     L RIYGT
Sbjct: 189 LTAYDNLNPRTRERVWGDLCRGPHIPTTKHIPAF-KLTRSSAAYWRGDQKNASLQRIYGT 247

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISY 282
           AW +Q+ L ++L F+EE+++RDHRKL  E+DLF   ++ GSG+  +H KG  + + L  Y
Sbjct: 248 AWESQEALDRHLEFIEEAQRRDHRKLGVELDLFSFPDEIGSGLAVFHPKGGIVRRELEDY 307

Query: 283 MRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT-------IKDLRTF 334
            RRK  +  Y+ +N+P +    L+  SGH D Y   MF     D          K  + +
Sbjct: 308 SRRKHTEAGYQFVNSPHITKAQLFHTSGHLDWYADGMFPPMHIDAEYNADGSLRKPGQDY 367

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
            LKPMNCP H  +F    +SYRELP+RL EFG+VYR E SG +HGL RVRG T DDAH+F
Sbjct: 368 YLKPMNCPMHCLIFRARGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRVRGLTMDDAHIF 427

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLD 453
           CT++QM +E   +   ++ +  D+G     ++LST+  +  VG++ +W++A  ++  V  
Sbjct: 428 CTRDQMSDELRSLLRFVLDLLADYGLTDFYLELSTKDPEKFVGAEEVWEEATTVLAEV-- 485

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS 513
                ++  +      G  AFYGPK    +KDA+GR WQ  TIQ+DFN P RF   Y  +
Sbjct: 486 ----GAESGLELVPDPGGAAFYGPKISVQVKDALGRTWQMSTIQLDFNFPERFGLEYTAA 541

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIAN 573
              +  PVMIHRA+FGSIERF GI+ E++ G  P WL+P+Q +   +    V Y +E+A 
Sbjct: 542 DGTRHRPVMIHRALFGSIERFFGILTEHYAGAFPAWLAPVQVVGIPVADEHVAYLEEVAT 601

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            LKSH +  E D  ++ +  KI  H+  K+P +++ GD++ +  ++  R    T    V+
Sbjct: 602 QLKSHGVRAEVDASDDRMAKKIVHHTNHKVPFMVLAGDRDVAAGAVSFRFGDRTQINGVA 661

Query: 634 LLD 636
             D
Sbjct: 662 RDD 664


>gi|15609751|ref|NP_217130.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis H37Rv]
 gi|15842154|ref|NP_337191.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551]
 gi|31793799|ref|NP_856292.1| threonyl-tRNA synthetase [Mycobacterium bovis AF2122/97]
 gi|121638501|ref|YP_978725.1| threonyl-tRNA synthetase [Mycobacterium bovis BCG str. Pasteur
           1173P2]
 gi|148662454|ref|YP_001283977.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|148823808|ref|YP_001288562.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis F11]
 gi|167968044|ref|ZP_02550321.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|215404564|ref|ZP_03416745.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987]
 gi|215412399|ref|ZP_03421153.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A]
 gi|215428017|ref|ZP_03425936.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis T92]
 gi|215431569|ref|ZP_03429488.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis EAS054]
 gi|218754354|ref|ZP_03533150.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis GM 1503]
 gi|219558618|ref|ZP_03537694.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis T17]
 gi|224990995|ref|YP_002645682.1| threonyl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253798303|ref|YP_003031304.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis KZN 1435]
 gi|254551665|ref|ZP_05142112.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|260187628|ref|ZP_05765102.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis CPHL_A]
 gi|260201742|ref|ZP_05769233.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis T46]
 gi|260205937|ref|ZP_05773428.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis K85]
 gi|289444154|ref|ZP_06433898.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis T46]
 gi|289448265|ref|ZP_06438009.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis CPHL_A]
 gi|289553596|ref|ZP_06442806.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis KZN 605]
 gi|289570786|ref|ZP_06451013.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis T17]
 gi|289575325|ref|ZP_06455552.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis K85]
 gi|289746408|ref|ZP_06505786.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis 02_1987]
 gi|289751239|ref|ZP_06510617.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis T92]
 gi|289754734|ref|ZP_06514112.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis EAS054]
 gi|289762788|ref|ZP_06522166.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis GM 1503]
 gi|294994277|ref|ZP_06799968.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis 210]
 gi|297635225|ref|ZP_06953005.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis KZN 4207]
 gi|297732218|ref|ZP_06961336.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis KZN R506]
 gi|298526090|ref|ZP_07013499.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis
           94_M4241A]
 gi|306776889|ref|ZP_07415226.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu001]
 gi|306780653|ref|ZP_07418990.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu002]
 gi|306785417|ref|ZP_07423739.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu003]
 gi|306790017|ref|ZP_07428339.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu004]
 gi|306794098|ref|ZP_07432400.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu005]
 gi|306798512|ref|ZP_07436814.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu006]
 gi|306804375|ref|ZP_07441043.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu008]
 gi|306807585|ref|ZP_07444253.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu007]
 gi|306969787|ref|ZP_07482448.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu009]
 gi|307080714|ref|ZP_07489884.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu011]
 gi|307085303|ref|ZP_07494416.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu012]
 gi|313659553|ref|ZP_07816433.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis KZN V2475]
 gi|54039692|sp|P67583|SYT_MYCBO RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|54042049|sp|P67582|SYT_MYCTU RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|166225463|sp|A1KLW4|SYT_MYCBP RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|166225467|sp|A5U5W5|SYT_MYCTA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|254783528|sp|C1AF85|SYT_MYCBT RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|2104299|emb|CAB08628.1| PROBABLE THREONYL-TRNA SYNTHETASE THRS (THREONINE-TRNA
           SYNTHETASE)(ThrRS) (THREONINE-TRNA LIGASE)
           [Mycobacterium tuberculosis H37Rv]
 gi|13882439|gb|AAK47005.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551]
 gi|31619393|emb|CAD94831.1| PROBABLE THREONYL-TRNA SYNTHETASE THRS (THREONINE-TRNA
           SYNTHETASE)(ThrRS) (THREONINE-TRNA LIGASE)
           [Mycobacterium bovis AF2122/97]
 gi|121494149|emb|CAL72627.1| Probable threonyl-tRNA synthetase thrS [Mycobacterium bovis BCG
           str. Pasteur 1173P2]
 gi|148506606|gb|ABQ74415.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|148722335|gb|ABR06960.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis F11]
 gi|224774108|dbj|BAH26914.1| threonyl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253319806|gb|ACT24409.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis KZN 1435]
 gi|289417073|gb|EFD14313.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis T46]
 gi|289421223|gb|EFD18424.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis CPHL_A]
 gi|289438228|gb|EFD20721.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis KZN 605]
 gi|289539756|gb|EFD44334.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis K85]
 gi|289544540|gb|EFD48188.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis T17]
 gi|289686936|gb|EFD54424.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis 02_1987]
 gi|289691826|gb|EFD59255.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis T92]
 gi|289695321|gb|EFD62750.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis EAS054]
 gi|289710294|gb|EFD74310.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis GM 1503]
 gi|298495884|gb|EFI31178.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis
           94_M4241A]
 gi|308214743|gb|EFO74142.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu001]
 gi|308326483|gb|EFP15334.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu002]
 gi|308329935|gb|EFP18786.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu003]
 gi|308333550|gb|EFP22401.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu004]
 gi|308337578|gb|EFP26429.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu005]
 gi|308341244|gb|EFP30095.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu006]
 gi|308345982|gb|EFP34833.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu007]
 gi|308349051|gb|EFP37902.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu008]
 gi|308352705|gb|EFP41556.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu009]
 gi|308361561|gb|EFP50412.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu011]
 gi|308365172|gb|EFP54023.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu012]
 gi|323718811|gb|EGB27968.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis CDC1551A]
 gi|326904227|gb|EGE51160.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis W-148]
 gi|328458073|gb|AEB03496.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis KZN 4207]
          Length = 692

 Score =  542 bits (1397), Expect = e-152,   Method: Composition-based stats.
 Identities = 248/663 (37%), Positives = 369/663 (55%), Gaps = 42/663 (6%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVA-INGKVCDLSD-PVREGSI 59
           PS  ++  P G+     V   G        R      V V   +G + DLS  P  +  I
Sbjct: 16  PSQARIRVPAGTTAATAVGEAGLP-----RRGTPDAIVVVRDADGNLRDLSWVPDVDTDI 70

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
             +        +VIRHS AH++A+AVQ ++P+ ++ IGP I DGFYYDFD  +PF+ ++L
Sbjct: 71  TPVAANTDDGRSVIRHSTAHVLAQAVQELFPQAKLGIGPPITDGFYYDFDVPEPFTPEDL 130

Query: 120 AQIEKKMQEIIARDSPFLKQYL-SHEKARELFESKKEAYKVEILESIPAK--------EN 170
           A +EK+M++I+     F ++   S E+AR   E   E YK+E+++             + 
Sbjct: 131 AALEKRMRQIVKEGQLFDRRVYESTEQARA--ELANEPYKLELVDDKSGDAEIMEVGGDE 188

Query: 171 VTLY-------RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
           +T Y       R+  W DLCRGPH+ +T  +  F KL + + AYWRGD     L RIYGT
Sbjct: 189 LTAYDNLNPRTRERVWGDLCRGPHIPTTKHIPAF-KLTRSSAAYWRGDQKNASLQRIYGT 247

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISY 282
           AW +Q+ L ++L F+EE+++RDHRKL  E+DLF   ++ GSG+  +H KG  + + L  Y
Sbjct: 248 AWESQEALDRHLEFIEEAQRRDHRKLGVELDLFSFPDEIGSGLAVFHPKGGIVRRELEDY 307

Query: 283 MRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT-------IKDLRTF 334
            RRK  +  Y+ +N+P +    L+  SGH D Y   MF     D          K  + +
Sbjct: 308 SRRKHTEAGYQFVNSPHITKAQLFHTSGHLDWYADGMFPPMHIDAEYNADGSLRKPGQDY 367

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
            LKPMNCP H  +F    +SYRELP+RL EFG+VYR E SG +HGL RVRG T DDAH+F
Sbjct: 368 YLKPMNCPMHCLIFRARGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRVRGLTMDDAHIF 427

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLD 453
           CT++QM +E   +   ++ +  D+G     ++LST+  +  VG++ +W++A  ++  V  
Sbjct: 428 CTRDQMRDELRSLLRFVLDLLADYGLTDFYLELSTKDPEKFVGAEEVWEEATTVLAEV-- 485

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS 513
                ++  +      G  AFYGPK    +KDA+GR WQ  TIQ+DFN P RF   Y  +
Sbjct: 486 ----GAESGLELVPDPGGAAFYGPKISVQVKDALGRTWQMSTIQLDFNFPERFGLEYTAA 541

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIAN 573
              +  PVMIHRA+FGSIERF GI+ E++ G  P WL+P+Q +   +    V Y +E+A 
Sbjct: 542 DGTRHRPVMIHRALFGSIERFFGILTEHYAGAFPAWLAPVQVVGIPVADEHVAYLEEVAT 601

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            LKSH +  E D  ++ +  KI  H+  K+P +++ GD++ +  ++  R    T    V+
Sbjct: 602 QLKSHGVRAEVDASDDRMAKKIVHHTNHKVPFMVLAGDRDVAAGAVSFRFGDRTQINGVA 661

Query: 634 LLD 636
             D
Sbjct: 662 RDD 664


>gi|148239112|ref|YP_001224499.1| threonyl-tRNA synthetase [Synechococcus sp. WH 7803]
 gi|166225511|sp|A5GJT7|SYT_SYNPW RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|147847651|emb|CAK23202.1| Threonyl-tRNA synthetase [Synechococcus sp. WH 7803]
          Length = 610

 Score =  542 bits (1397), Expect = e-152,   Method: Composition-based stats.
 Identities = 250/584 (42%), Positives = 352/584 (60%), Gaps = 17/584 (2%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           + +    +   L  IRHS +H+MA AVQ ++P  +V IGP  E GFYYDFD  +PF+  +
Sbjct: 23  VVLPKTSENEQLLRIRHSMSHVMAMAVQQLFPNARVTIGPWTESGFYYDFDNPEPFTEAD 82

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG- 177
           L  I+K M +II +  P  +  +S  +A E  +++ E YK+EILE +  +E +TLY  G 
Sbjct: 83  LKAIKKGMIKIINKKLPLERVEVSRSEAEEKIKAQNEPYKLEILEGL--QEPITLYTLGE 140

Query: 178 EWFDLCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           +W+DLC GPHV +TGQ+  K F+L  VAGAYWRGD  +  L RIYGTAW T ++L ++  
Sbjct: 141 DWWDLCAGPHVENTGQLNAKAFELESVAGAYWRGDETKAQLQRIYGTAWETAEQLAEHKR 200

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEI 294
             EE+ +RDHR++ +++DLF I ++   G++FWH +G ++   +  + R+   +  YE +
Sbjct: 201 RKEEALRRDHRRIGKDLDLFSIEDEAGAGLVFWHPRGARMRLLIEEFWRQAHFEGGYELL 260

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
            TP V D  LW+ SGH D Y  +MF     D+     R + LKPMNCP HV  +   L+S
Sbjct: 261 YTPHVADISLWKTSGHLDFYAESMFGPMEVDE-----REYQLKPMNCPFHVLTYASKLRS 315

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YRELP+R AE G+VYR E  G +HGLMRVRGFTQDDAHVFC  EQ+ +E LKI +L   I
Sbjct: 316 YRELPIRWAELGTVYRYERPGVMHGLMRVRGFTQDDAHVFCLPEQISDEILKILDLTERI 375

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
              F F    + LSTRPEK +G DA+WD A   +   L+      +      +  G GAF
Sbjct: 376 LSTFDFNTYEINLSTRPEKSIGDDAVWDLATKGLIEALE------RKGWAYKIDEGGGAF 429

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  ++DAIGR WQC TIQ+DFNLP RF   Y+ +   K  P+MIHRA+FGS+ERF
Sbjct: 430 YGPKIDLKIEDAIGRMWQCSTIQLDFNLPERFKLDYIAADGSKQRPIMIHRAIFGSLERF 489

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
            GIM EN+ G+ PLWL+P Q  +  +T     YA+ + + L    +    D   + +   
Sbjct: 490 FGIMTENYAGDYPLWLAPEQVRLLPVTDEVQPYAESLLDQLTQAGVRATIDRSGDRLGKL 549

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           IR     KIP++ + G KEA + ++ +R         V++ D +
Sbjct: 550 IRTGEQMKIPVLAVIGAKEAEQNAVSLRSRRDGDLGVVAVADLL 593


>gi|317471544|ref|ZP_07930893.1| threonyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
 gi|316900979|gb|EFV22944.1| threonyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
          Length = 539

 Score =  542 bits (1397), Expect = e-152,   Method: Composition-based stats.
 Identities = 237/546 (43%), Positives = 340/546 (62%), Gaps = 15/546 (2%)

Query: 108 FDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPA 167
            +K+ PF+ D+L +IE +M++I+             E+A    + + E YKVE++E +P 
Sbjct: 1   MEKDTPFTQDDLEKIEAEMKKIVKEGLQITCFTKPREEAIAFMKEQNEPYKVELIEDLPE 60

Query: 168 KENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNT 227
              ++ Y+QGE+ DLC GPH+ +T  VK F KL  +AGAYWRG+    ML+RIYGTA+  
Sbjct: 61  DSVISFYQQGEFIDLCAGPHLMTTKPVKAF-KLTSLAGAYWRGNEKNQMLTRIYGTAFAK 119

Query: 228 QQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-K 286
           + EL  YL  +EE++KRDHRKL +E+ LF + ++G G  F+   G  +  TL+ Y R   
Sbjct: 120 KAELKDYLTMMEEAKKRDHRKLGKELGLFMMRDEGPGFPFFLPNGMVLKNTLLDYWREIH 179

Query: 287 IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA 346
            K  Y EI++P +L +HLW+ SGHWD Y+ NM+       T+ D   FA+KPMNCPG V 
Sbjct: 180 NKAGYVEISSPIMLSRHLWETSGHWDHYQENMYT------TVIDEEDFAIKPMNCPGGVL 233

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           V+    +SYR+LP+R+ E G V+R+E SG LHGLMRVR FTQDDAH+F   EQ+ +E   
Sbjct: 234 VYQSEPRSYRDLPLRMGELGLVHRHEKSGQLHGLMRVRCFTQDDAHIFMMPEQIKDEIKG 293

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           +  LI  +Y  FGF+   V+LSTRPE  +GSD  W+ A + ++  LD +       ++  
Sbjct: 294 VAALIDQVYSLFGFKYH-VELSTRPEDSMGSDEDWEMATDSLRSALDDLG------LDYV 346

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
           V  G+GAFYGPK ++ L+D+IGR WQCGTIQ+DF LP RF+  Y  +  EK  P+MIHR 
Sbjct: 347 VNEGDGAFYGPKIDFHLEDSIGRTWQCGTIQLDFQLPLRFDLHYTGADGEKHRPIMIHRV 406

Query: 527 VFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF 586
            FGSIERFIGI+IE+F G  P WL+P+Q  V  I+   +EY  ++ + LK+  +  E D 
Sbjct: 407 AFGSIERFIGILIEHFAGAFPTWLAPVQVKVIPISDKHLEYGTKVLDALKAAGIRAEIDT 466

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           R E + YKIRE  + KIP +++ G KE   +++ +R        ++SL D I  + KE  
Sbjct: 467 RAEKMGYKIREAQLHKIPYMLVVGGKEEENQAVSVRSRFKGDEGQMSLDDFICAIRKEIE 526

Query: 647 PPDCQK 652
             + ++
Sbjct: 527 TKEIRQ 532


>gi|291566329|dbj|BAI88601.1| threonyl-tRNA synthetase [Arthrospira platensis NIES-39]
          Length = 622

 Score =  542 bits (1396), Expect = e-152,   Method: Composition-based stats.
 Identities = 270/617 (43%), Positives = 370/617 (59%), Gaps = 44/617 (7%)

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
            D   L  IRH+CAHI+A AVQ ++PE +VAIGP  + GFYYDFD+++PF+ ++L +I K
Sbjct: 17  SDREKLRRIRHTCAHILAMAVQKLFPETKVAIGPTTDTGFYYDFDRKEPFTPEDLGEITK 76

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE------ 178
           +M+ II  + P +++ ++ E+ R   +   E  K+EIL+SIP  E +T Y  G       
Sbjct: 77  EMKRIIKGNLPVIREEVNREQMRGEIQQLNEPLKLEILDSIPETETMTRYFIGSPDMGRA 136

Query: 179 --------------------WFDLCRGPHVRSTGQVKK-FFKLMKVAGAYWRGDSNRPML 217
                               W+DLC GPH+ STG++      L  VAGAYWRGD   P L
Sbjct: 137 VHPEVEPSLMEPVVIPPQEFWWDLCAGPHLNSTGEINPDALALESVAGAYWRGDETLPQL 196

Query: 218 SRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIF 276
            RIYGTAW T ++L  Y    EE++KRDHRKL +E+DLF I ED G G++FWH KG ++ 
Sbjct: 197 QRIYGTAWETPEQLEYYWQQKEEAKKRDHRKLGQELDLFSIQEDAGGGLVFWHPKGSRMR 256

Query: 277 QTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFA 335
             +  Y R+  ++  YE + TP + +  LW+ SGH+D YR NMF     D    + +++ 
Sbjct: 257 LLIEDYWRQAHLQGGYELLYTPHIANLALWKTSGHYDFYRENMF-----DQIEIENQSYQ 311

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC 395
           LKPMNCP HV  +   L SYRELP+R AE G+VYR E SG LHGLMRVRGFTQDDAH+FC
Sbjct: 312 LKPMNCPFHVLTYQSHLHSYRELPIRWAELGTVYRYERSGVLHGLMRVRGFTQDDAHIFC 371

Query: 396 TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTI 455
             EQ+ +E L + NL   I  DFGF K  V LSTRP K VG+D +W  A + +   L+  
Sbjct: 372 LPEQVADEILGVLNLTEKILSDFGFSKYEVNLSTRPSKSVGNDGVWQLATDALISALNI- 430

Query: 456 KNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS 515
                   +  V  G GAFYGPK +  ++DAI R WQC TIQVDFNLP RFN  YV +  
Sbjct: 431 -----KGWDYVVDEGGGAFYGPKIDIKIQDAIARLWQCSTIQVDFNLPERFNMEYVAADG 485

Query: 516 EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLL 575
            +  P+MIHRA+FGS+ERF GI+IEN+ G+ PLWL+P+   V  ++    +YA+ I   L
Sbjct: 486 SRQRPIMIHRAIFGSLERFFGILIENYAGDFPLWLAPVMVRVLVVSDRFRDYAKSIVQSL 545

Query: 576 KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
           K  ++  E D   E +  +IR   ++KIP+ ++ G +E   +S+ +R         ++L 
Sbjct: 546 KQQNIRAEVDNTGERLGKQIRACELEKIPVTVVIGQRELDNQSLSVRTRSRGDIGTMTL- 604

Query: 636 DAIPILTKESLPPDCQK 652
              P LT+E L  +  K
Sbjct: 605 ---PQLTEEILKANAAK 618


>gi|212534744|ref|XP_002147528.1| threonyl-tRNA synthetase, putative [Penicillium marneffei ATCC
           18224]
 gi|210069927|gb|EEA24017.1| threonyl-tRNA synthetase, putative [Penicillium marneffei ATCC
           18224]
          Length = 724

 Score =  542 bits (1396), Expect = e-152,   Method: Composition-based stats.
 Identities = 227/681 (33%), Positives = 363/681 (53%), Gaps = 54/681 (7%)

Query: 3   SDIKLTFP--DG---SIKNFPVHATGSDVAESISRSLAKKAVAVAING-KVCDLSDPVR- 55
           SDI +T    DG   +I      +T     + I + ++   V   I+  ++ DL+ P+  
Sbjct: 54  SDITITLDIGDGKPSTIIGKSWESTPGAFLKDIPKEISTNIVIAKIDDKELWDLNRPLEK 113

Query: 56  EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD--KEQP 113
           +  +  +  + P    V  HS AH + EA +  +    ++ GP    GF+YD      + 
Sbjct: 114 DCKVSYLPFDHPEGRDVFWHSSAHCLGEACELEF-GCLLSHGPPTPQGFFYDMAIPNGRA 172

Query: 114 FSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTL 173
               + A ++KK  +I      F +  ++ E  +++F   K  YK+  + ++   E  T+
Sbjct: 173 VLPSDWAPLDKKAAQIFKERQSFDRLEVTKENLKKMFAYSK--YKLHYINNLVEGEKSTV 230

Query: 174 YRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQ 233
           YR G   DLCRGPH+++T ++K F K+M+ + AY+ GD +   L RI G A+  +  + +
Sbjct: 231 YRCGTLVDLCRGPHIQNTNKIKTF-KIMQNSSAYFLGDQSNDSLQRIRGVAFPDKNGMKE 289

Query: 234 YLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYE 292
           +L FLEE+EKR+H+K+ +E +LF   +   G  F    G KIF  L   +R + +   Y+
Sbjct: 290 HLKFLEEAEKRNHQKIGKEQELFFFDDVSPGCPFLLPNGTKIFNALQKLLRSEYRKRGYQ 349

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+ TP + D  +W+ SGHW  Y  +MF +        + R +ALKPMNCPGH  +F H  
Sbjct: 350 EVQTPNMYDVSIWKTSGHWAHYSDDMFKLDV------EKREWALKPMNCPGHFMLFGHRE 403

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
           +SYRELP+R+A+FG ++RNE SG+L GL RVR F QDD H+FCT EQ+ +E   + + + 
Sbjct: 404 RSYRELPLRIADFGVLHRNEASGALSGLTRVRKFQQDDTHIFCTAEQISSEIEGLFDFLK 463

Query: 413 SIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
           SIY  FGF   + KLSTRPEK +G    W+ AE+ ++  L+          +  +  G+G
Sbjct: 464 SIYGLFGFTFKL-KLSTRPEKYMGELEAWNYAEDQLRQALNKFMGD-----DWEINEGDG 517

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE---------------- 516
           AFYGPK +  + DA+ R++QC TIQ+D+  P  F   Y+ +  +                
Sbjct: 518 AFYGPKIDITIADALKREFQCATIQLDYQAPINFKLEYITNEKQASADPKANNDGAEKAK 577

Query: 517 -----KCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
                +  PV+IHRA+ GS ERF+GI+IE+F G  P W+SP Q ++  +  +  +YA+E+
Sbjct: 578 ETNVNRARPVVIHRAIIGSFERFLGILIEHFAGKWPFWISPRQILIVPVMPALNDYAKEL 637

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT-- 629
             +L +  L+++ D    T+  KIR   + +   I + G +E   RS+ IR      +  
Sbjct: 638 QQILLADKLNVDVDVSGNTLQKKIRTGQLAQYNFIFVVGAQERDSRSVNIRNRDDPASHA 697

Query: 630 --QKVSLLDA---IPILTKES 645
             + +SL +A   +  L KE 
Sbjct: 698 KGELISLEEARVKLRALRKER 718


>gi|325000692|ref|ZP_08121804.1| threonyl-tRNA synthetase [Pseudonocardia sp. P1]
          Length = 682

 Score =  542 bits (1396), Expect = e-152,   Method: Composition-based stats.
 Identities = 233/658 (35%), Positives = 361/658 (54%), Gaps = 41/658 (6%)

Query: 17  FPVHAT-GSDVAESISRSLAKKAVAVAIN--GKVCDLSD-PVREGSIEIITPEDPRSLAV 72
            P   T G+ + E    +   +A+ V  +  G + DL+  P  +  +  +        +V
Sbjct: 15  VPAGTTAGARIREGGLPTSGPEAIVVVRDAGGTLRDLAWAPEADTEVVAVAANTDEGRSV 74

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIAR 132
           IRHS AH++A+AVQ ++P+ ++ IGP + DGFYYDFD + PF+ ++L +IE  M++I+  
Sbjct: 75  IRHSAAHVLAQAVQQLFPKARLGIGPPVTDGFYYDFDVDTPFTPEDLKKIESAMKKIVKA 134

Query: 133 DSPFLKQYL-SHEKARELFESKKEAYKVEILESIPAKE----------NVTLY-----RQ 176
              F ++     ++AR   E   E YK+E+++   + +           +T+Y       
Sbjct: 135 GQKFSRRRFADRDEARA--ELADEPYKLELVDLKGSDDSEVMEVDSSGELTVYDNVHAHT 192

Query: 177 GE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
           G+  W DLCRGPH+ +T  V  F      A AYWRGD     L RIYGTAW +Q+    Y
Sbjct: 193 GDVVWSDLCRGPHLPTTKFVPAFTLTRS-AAAYWRGDQRNAQLQRIYGTAWESQEAQDAY 251

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYE 292
           L  + E+E+RDHR+L  E+DLF   ++ GSG+  +H KG  + + L    R R     YE
Sbjct: 252 LERVAEAERRDHRRLGSELDLFSFPDEIGSGLPVFHPKGGVVRKELEDLSRERHAAAGYE 311

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT-------IKDLRTFALKPMNCPGHV 345
            + TP      L++ SGH D Y   M+     D          +    + LKPMNCP H 
Sbjct: 312 FVYTPHATKGQLFELSGHLDWYADGMYPPMQLDAEYDAEGQLKRPAVDYYLKPMNCPMHN 371

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +F    +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDDAH++CT++QM +E  
Sbjct: 372 LIFASRGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYCTRDQMQDEIR 431

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKR-VGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            +   ++ + +D+G +   ++LSTR  ++ +GSD LW++A + ++        +    + 
Sbjct: 432 SLLQFVLDLLRDYGLDDFYLELSTRNPEKSIGSDELWEEATDALREA------AGNFGLE 485

Query: 465 TGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIH 524
                G  AFY PK     +DAIGR WQ  TIQVD  LP RF   Y      +  PVMIH
Sbjct: 486 LRDDPGGAAFYAPKISVQARDAIGRYWQMSTIQVDLMLPDRFELEYTAGDGSRQRPVMIH 545

Query: 525 RAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIET 584
           RA+FGSIERF G++ E++ G  P WL+P+Q +   +T +  +Y +EIA  L++  + I+ 
Sbjct: 546 RALFGSIERFFGVLTEHYAGAFPAWLAPVQVVGIPVTDTQEDYVREIAARLRAEGIRIDV 605

Query: 585 DFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           D  ++ +  KIR H+++K+P +++ G ++    ++  R    + T  V + DA+  + 
Sbjct: 606 DAGDDRMQKKIRTHTLQKVPFLLLAGGRDVEAGAVSFRFRDGSQTNGVPVDDAVRSIV 663


>gi|145224420|ref|YP_001135098.1| threonyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
 gi|189083613|sp|A4TD09|SYT_MYCGI RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|145216906|gb|ABP46310.1| Ser-tRNA(Thr) hydrolase [Mycobacterium gilvum PYR-GCK]
          Length = 695

 Score =  542 bits (1396), Expect = e-152,   Method: Composition-based stats.
 Identities = 237/660 (35%), Positives = 363/660 (55%), Gaps = 42/660 (6%)

Query: 17  FPVHATGSDVAESI---SRSLAKKAVAVA-INGKVCDLSD-PVREGSIEIITPEDPRSLA 71
                T           SR      V V   +G++ DLS  P  +  +  +  +     +
Sbjct: 15  VTAGTTAGQAVRDAGLPSRGAPDAVVVVRDADGRLRDLSWVPDTDVEVTPVAADTEDGRS 74

Query: 72  VIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIA 131
           VIRHS AH++A+AVQ ++P+ ++ IGP I DGFYYDFD  +PF+ + L  +EKKM++I+ 
Sbjct: 75  VIRHSAAHVLAQAVQEMFPDAKLGIGPPITDGFYYDFDVAEPFTPEHLQALEKKMRKIVK 134

Query: 132 RDSPFLKQYL-SHEKARELFESKKEAYKVEILESIPA----------KENVTLY------ 174
               F ++   S ++AR   E   E YK+E+++               + +T Y      
Sbjct: 135 DGQIFERRVFGSKDEARA--ELASEPYKLELIDDKSGADDPEVMEVGGDELTAYDNLNPR 192

Query: 175 -RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQ 233
            R+  W DLCRGPH+ +T  +  F        AYWRGD N   L RIYGTAW +Q+ L +
Sbjct: 193 TRERVWGDLCRGPHIPTTRYIPAFTLTRSS-AAYWRGDQNNASLQRIYGTAWESQEALDR 251

Query: 234 YLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD-DY 291
           +L  +EE+++RDHRKL  E+DLF   ++ GSG+  +H KG  + + L  Y RRK  +  Y
Sbjct: 252 HLELIEEAQRRDHRKLGVELDLFSFPDELGSGLPVFHPKGGVVRRELEEYSRRKHIEAGY 311

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD-------LRTFALKPMNCPGH 344
           E +NTP +  + L+  SGH + Y   MF     D    +        + + LKPMNCP H
Sbjct: 312 EFVNTPHITKEQLYITSGHLEWYADGMFPPMQIDAEYNEDGTVRKPGQDYYLKPMNCPMH 371

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             ++    +SYRELP+RL EFGSVYR E SG +HGL RVRG TQDDAH++CT+E+M +E 
Sbjct: 372 HLIYRSRGRSYRELPLRLFEFGSVYRYEKSGVIHGLTRVRGMTQDDAHIYCTREEMRDEL 431

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            ++   ++ +  D+G +   ++LST+     VGSD LW++A   ++ V ++        +
Sbjct: 432 ARLLQFVLDLLADYGLDDFYLELSTKDPDKFVGSDDLWEEATETLREVAESSG------L 485

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
                 G  AFYGPK    ++DA+GR+WQ  TIQ+DFN+P RF   Y +S   +  PV+I
Sbjct: 486 ALVPDPGGAAFYGPKISVQVRDALGRNWQMSTIQLDFNMPDRFELEYTSSDGTRRRPVLI 545

Query: 524 HRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIE 583
           HRA+FGSIERF G++ E++ G  P+WL+P+Q +   +  +   Y   +A  L+   + +E
Sbjct: 546 HRALFGSIERFFGVLTEHYAGAFPVWLAPVQVVGIPVADAHAGYLDGVAAELRRRGIRVE 605

Query: 584 TDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            D  ++ +  KI  H+ +K+P +++ GDK+    ++  R    T    V    A+  +  
Sbjct: 606 VDASDDRMAKKIVNHTNQKVPFMLLAGDKDVEAGAVSFRFGDRTQINGVPRDQAVEAIVD 665


>gi|88809590|ref|ZP_01125097.1| threonyl-tRNA synthetase [Synechococcus sp. WH 7805]
 gi|88786340|gb|EAR17500.1| threonyl-tRNA synthetase [Synechococcus sp. WH 7805]
          Length = 611

 Score =  542 bits (1395), Expect = e-152,   Method: Composition-based stats.
 Identities = 248/589 (42%), Positives = 350/589 (59%), Gaps = 17/589 (2%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           + +    +   L  IRHS +H+MA AVQ ++P+ +V IGP  E GFYYDFD   PF+  +
Sbjct: 23  VVLPKTSENEQLLKIRHSMSHVMAMAVQQLFPQARVTIGPWTESGFYYDFDNPDPFTEAD 82

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG- 177
           L  I+K M +II +  P  +  +S  +A    +++ E YK+EILE +  +E +TLY  G 
Sbjct: 83  LKAIKKGMIKIINKKLPLERVEVSRSQAEAKIKAQNEPYKLEILEGL--QEPITLYTLGE 140

Query: 178 EWFDLCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           +W+DLC GPHV  TGQ+  K F+L  VAGAYWRGD  +  L RIYGTAW T ++L ++  
Sbjct: 141 DWWDLCAGPHVDHTGQLNAKAFELESVAGAYWRGDETKAQLQRIYGTAWETPEQLAEHKR 200

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEI 294
             EE+ +RDHR++ +++DLF I ++   G++FWH +G ++   +  + R+   +  YE +
Sbjct: 201 RKEEALRRDHRRIGKDLDLFSIEDEAGAGLVFWHPRGARMRLLIEDFWRQAHFEGGYELL 260

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
            TP V D  LW+ SGH D Y  +MF     D+     R + LKPMNCP HV  +   L+S
Sbjct: 261 YTPHVADISLWKTSGHLDFYAESMFGPMQVDE-----REYQLKPMNCPFHVLTYASKLRS 315

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YRELP+R AE G+VYR E  G +HGLMRVRGFTQDDAHVFC  EQ+ +E LKI +L   I
Sbjct: 316 YRELPIRWAELGTVYRYERPGVMHGLMRVRGFTQDDAHVFCLPEQISDEILKILDLTERI 375

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
              F F    + LSTRPEK +G DA+WD A   +   L+      +      +  G GAF
Sbjct: 376 LSTFDFNTYEINLSTRPEKSIGDDAVWDLATKGLIEALE------RKGWAYKIDEGGGAF 429

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  ++DAIGR WQC TIQ+DFNLP RF   Y+ +   K  P+MIHRA+FGS+ERF
Sbjct: 430 YGPKIDLKIEDAIGRMWQCSTIQLDFNLPERFKLDYIAADGSKQRPIMIHRAIFGSLERF 489

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
            GIM EN+ G+ P WL+P Q  +  +T     YA+ + + L    +    D   + +   
Sbjct: 490 FGIMTENYAGDYPFWLAPEQVRLLPVTDEVQPYAERLLDQLTQVGVRATIDRSGDRLGKL 549

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           IR     KIP++ + G KEA + ++ +R         V++ D +  +  
Sbjct: 550 IRTGEQMKIPVLAVIGAKEAEQNAVSLRSRRDGDLGVVTMADLLRAVQN 598


>gi|308379255|ref|ZP_07485665.2| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu010]
 gi|308357619|gb|EFP46470.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu010]
          Length = 697

 Score =  542 bits (1395), Expect = e-152,   Method: Composition-based stats.
 Identities = 248/663 (37%), Positives = 369/663 (55%), Gaps = 42/663 (6%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVA-INGKVCDLSD-PVREGSI 59
           PS  ++  P G+     V   G        R      V V   +G + DLS  P  +  I
Sbjct: 21  PSQARIRVPAGTTAATAVGEAGLP-----RRGTPDAIVVVRDADGNLRDLSWVPDVDTDI 75

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
             +        +VIRHS AH++A+AVQ ++P+ ++ IGP I DGFYYDFD  +PF+ ++L
Sbjct: 76  TPVAANTDDGRSVIRHSTAHVLAQAVQELFPQAKLGIGPPITDGFYYDFDVPEPFTPEDL 135

Query: 120 AQIEKKMQEIIARDSPFLKQYL-SHEKARELFESKKEAYKVEILESIPAK--------EN 170
           A +EK+M++I+     F ++   S E+AR   E   E YK+E+++             + 
Sbjct: 136 AALEKRMRQIVKEGQLFDRRVYESTEQARA--ELANEPYKLELVDDKSGDAEIMEVGGDE 193

Query: 171 VTLY-------RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
           +T Y       R+  W DLCRGPH+ +T  +  F KL + + AYWRGD     L RIYGT
Sbjct: 194 LTAYDNLNPRTRERVWGDLCRGPHIPTTKHIPAF-KLTRSSAAYWRGDQKNASLQRIYGT 252

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISY 282
           AW +Q+ L ++L F+EE+++RDHRKL  E+DLF   ++ GSG+  +H KG  + + L  Y
Sbjct: 253 AWESQEALDRHLEFIEEAQRRDHRKLGVELDLFSFPDEIGSGLAVFHPKGGIVRRELEDY 312

Query: 283 MRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT-------IKDLRTF 334
            RRK  +  Y+ +N+P +    L+  SGH D Y   MF     D          K  + +
Sbjct: 313 SRRKHTEAGYQFVNSPHITKAQLFHTSGHLDWYADGMFPPMHIDAEYNADGSLRKPGQDY 372

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
            LKPMNCP H  +F    +SYRELP+RL EFG+VYR E SG +HGL RVRG T DDAH+F
Sbjct: 373 YLKPMNCPMHCLIFRARGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRVRGLTMDDAHIF 432

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLD 453
           CT++QM +E   +   ++ +  D+G     ++LST+  +  VG++ +W++A  ++  V  
Sbjct: 433 CTRDQMRDELRSLLRFVLDLLADYGLTDFYLELSTKDPEKFVGAEEVWEEATTVLAEV-- 490

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS 513
                ++  +      G  AFYGPK    +KDA+GR WQ  TIQ+DFN P RF   Y  +
Sbjct: 491 ----GAESGLELVPDPGGAAFYGPKISVQVKDALGRTWQMSTIQLDFNFPERFGLEYTAA 546

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIAN 573
              +  PVMIHRA+FGSIERF GI+ E++ G  P WL+P+Q +   +    V Y +E+A 
Sbjct: 547 DGTRHRPVMIHRALFGSIERFFGILTEHYAGAFPAWLAPVQVVGIPVADEHVAYLEEVAT 606

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            LKSH +  E D  ++ +  KI  H+  K+P +++ GD++ +  ++  R    T    V+
Sbjct: 607 QLKSHGVRAEVDASDDRMAKKIVHHTNHKVPFMVLAGDRDVAAGAVSFRFGDRTQINGVA 666

Query: 634 LLD 636
             D
Sbjct: 667 RDD 669


>gi|15790739|ref|NP_280563.1| threonyl-tRNA synthetase [Halobacterium sp. NRC-1]
 gi|10581281|gb|AAG20043.1| threonyl-tRNA synthetase [Halobacterium sp. NRC-1]
          Length = 650

 Score =  542 bits (1395), Expect = e-151,   Method: Composition-based stats.
 Identities = 242/648 (37%), Positives = 364/648 (56%), Gaps = 24/648 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M S + +T PDGS       AT  DVA  I   L +  VA  I+ ++    +P+  +  I
Sbjct: 11  MSS-VTVTLPDGSTLEVASGATVEDVAHEIGPGLGRDTVAGKIDHELVAKEEPISEDCEI 69

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EI+T +    L V+RH+ AH++A+A++   P+ ++ IGP  ++GFYYD        +D+L
Sbjct: 70  EIVTDQSDEYLDVLRHTAAHVLAQAIRRHHPDAKLTIGPYTDEGFYYDIA-NVELDADDL 128

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE-SIPAKENVTLYRQGE 178
            +I+ +   II  D    +       ARE        +K EIL+        V+ Y QG+
Sbjct: 129 DEIQAEAASIIDDDLDVERVEYDRADARE--HYADNEFKREILDAEAAGDGPVSFYTQGD 186

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + DLC+GPHV STG++  F ++++ + AYWRGD  R  L+R+YGTA+ T+ +L +YL   
Sbjct: 187 FEDLCKGPHVDSTGEIGGF-EVLETSAAYWRGDEERETLTRVYGTAFPTESDLQEYLARR 245

Query: 239 EESEKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
           EE+++RDHRKL REMDLF I +  G G+  +H  G  + + L  Y+R    +  Y+E+ T
Sbjct: 246 EEAKERDHRKLGREMDLFSIPDVTGPGLPLYHPNGKTVLRELSEYVRGLNSEMGYDEVET 305

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +    LW+QSGH+D+Y  +MF +   D        + LKPMNCPGH  +FN G  SYR
Sbjct: 306 PHLFRTELWKQSGHYDNYVDDMFLLDVND------EEYGLKPMNCPGHATIFNEGSWSYR 359

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +LPVR  E G VYR E  G L GL RV  FT DD HVF   +Q+  E  ++ + I  +  
Sbjct: 360 DLPVRYFEDGKVYRKEQRGELSGLSRVWAFTIDDGHVFARADQIEAEVRRLMDTITEVLD 419

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
            F  +  +  L+TRPEK VGSD +W+ +E  ++ VLD      Q  ++  V  G+GAFYG
Sbjct: 420 TFDLDYEVA-LATRPEKSVGSDDIWEQSERQLREVLD------QQGVDYDVEPGDGAFYG 472

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK ++  +DA+GR W   T+Q+DFN+P RF+  Y  S ++   PVMIHRA++GS ERF  
Sbjct: 473 PKIDFGFEDALGRSWDGPTVQLDFNMPDRFDLEYTGSDNDAHQPVMIHRALYGSYERFFM 532

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           ++IE++ G  P WL+P Q  +  +T   + YA  + N L      +E + R+ T+  KI+
Sbjct: 533 VLIEHYNGRFPTWLAPEQVRILPVTDDNLGYAHRVKNELGD--YRVEVEDRDWTVGKKIQ 590

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +     +P +++ GD E    ++ +R       + V L +    L  E
Sbjct: 591 QAHDDNVPYMLVVGDDEEDADAVSVRDRQEREGKGVDLAEFRAHLDSE 638


>gi|67605980|ref|XP_666722.1| threonyl-tRNA synthetase [Cryptosporidium hominis TU502]
 gi|54657772|gb|EAL36495.1| threonyl-tRNA synthetase [Cryptosporidium hominis]
          Length = 763

 Score =  542 bits (1395), Expect = e-151,   Method: Composition-based stats.
 Identities = 235/712 (33%), Positives = 366/712 (51%), Gaps = 84/712 (11%)

Query: 3   SDIKLTFPDGSIKN-FPVHATGSDVAESISRSLAKKAVAVAI------------------ 43
             IK+T  +G  ++      +  ++A  IS+ LA+  +   I                  
Sbjct: 59  EPIKITLQNGGQRDGVKFQTSPMEIARQISKKLAESCIVAKIRYNKSLFIEDDEVRGIEE 118

Query: 44  --------------NG-KVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQS 87
                         +G ++ D + P+  +  +EI+T +      V  HS +HI+ + +++
Sbjct: 119 DEEETCCQGHEDQSDGWRLWDATRPLEGDCELEILTFDSLEGSGVFWHSSSHILGQCLEN 178

Query: 88  IWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKA 146
            +   QV IGP +  GFYYD +      S+ E + IE   + II+    F +   + E+A
Sbjct: 179 EY-GAQVTIGPALNPGFYYDSYMGTHSVSNTEYSDIENCAKTIISEKQQFERLQCNKEEA 237

Query: 147 RELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAG 205
            ELF+     +KV ++   IP     T+YR G + DLC GPH+  TG VK F K+ K +G
Sbjct: 238 LELFK--DNPFKVSLIMSKIPDGAQTTIYRCGSFVDLCTGPHIPHTGIVKAF-KVTKNSG 294

Query: 206 AYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI-AEDGSG 264
             W G++    L R+YG ++  ++ L +YL  LEE++KRDHR L   + LF   +    G
Sbjct: 295 CNWLGNTENDALQRVYGVSFPDKKRLDEYLNMLEEAKKRDHRLLGSNLQLFFFDSNVSPG 354

Query: 265 VIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKC 323
             FW   G +++  L+ ++R + +  ++ E+ TP +    LW+ SGH+ +Y+ NMF    
Sbjct: 355 SCFWLPAGARLYNKLMDFIRSEYRIREFTEVITPNIFSCDLWKTSGHYFAYKENMFIFDV 414

Query: 324 ADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRV 383
                 + + + LKPMNCPGH  +F H   SYR+LP+RLA+FG ++RNE SG+L+GL RV
Sbjct: 415 ------EEKEWGLKPMNCPGHCVMFKHMNPSYRQLPIRLADFGVLHRNEFSGALNGLTRV 468

Query: 384 RGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDD 443
           R F QDDAH+FCT EQ+  E  K  + +  IY   GF    + LST P++ +G++  W +
Sbjct: 469 RRFQQDDAHIFCTPEQIQEEVFKALDFLFFIYGQLGFT-FDLFLSTMPKEHLGTEEQWKE 527

Query: 444 AENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLP 503
           AEN +K  LD          +  +  G+GAFYGPK + +L DA+ R  QCGTIQ+DF LP
Sbjct: 528 AENALKSALDKTGR------DWKLNPGDGAFYGPKIDIMLWDALKRQHQCGTIQLDFQLP 581

Query: 504 SRFNAFYVNSHS---------------------------EKCHPVMIHRAVFGSIERFIG 536
            RFN  Y    +                               PV+IHRA+ GS+ER   
Sbjct: 582 IRFNLQYRTDENISEESTNQEQPPSHQNADQNPDNSLKQGYKRPVIIHRAILGSVERMSA 641

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +++E+  G LP WLSP QAIV +I+   VEYA+ +   L      +  D+   TIN KIR
Sbjct: 642 VILEHTGGKLPFWLSPRQAIVLSISEKTVEYAKSVERELSRRGFDVSGDYSAATINKKIR 701

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK-VSLLDAIPILTKESLP 647
           E  + +   +++ G+ EA ++ + +R   +T  Q+ ++L   I   +    P
Sbjct: 702 ESQLLQWNYMLVIGENEARDKKVTLRCRDTTIPQELLTLDQLILKFSSMGFP 753


>gi|169236481|ref|YP_001689681.1| threonyl-tRNA synthetase [Halobacterium salinarum R1]
 gi|73921305|sp|Q9HP27|SYT_HALSA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|229470722|sp|B0R6G6|SYT_HALS3 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|167727547|emb|CAP14335.1| threonine--tRNA ligase [Halobacterium salinarum R1]
          Length = 640

 Score =  541 bits (1394), Expect = e-151,   Method: Composition-based stats.
 Identities = 242/648 (37%), Positives = 364/648 (56%), Gaps = 24/648 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M S + +T PDGS       AT  DVA  I   L +  VA  I+ ++    +P+  +  I
Sbjct: 1   MSS-VTVTLPDGSTLEVASGATVEDVAHEIGPGLGRDTVAGKIDHELVAKEEPISEDCEI 59

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EI+T +    L V+RH+ AH++A+A++   P+ ++ IGP  ++GFYYD        +D+L
Sbjct: 60  EIVTDQSDEYLDVLRHTAAHVLAQAIRRHHPDAKLTIGPYTDEGFYYDIA-NVELDADDL 118

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE-SIPAKENVTLYRQGE 178
            +I+ +   II  D    +       ARE        +K EIL+        V+ Y QG+
Sbjct: 119 DEIQAEAASIIDDDLDVERVEYDRADARE--HYADNEFKREILDAEAAGDGPVSFYTQGD 176

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + DLC+GPHV STG++  F ++++ + AYWRGD  R  L+R+YGTA+ T+ +L +YL   
Sbjct: 177 FEDLCKGPHVDSTGEIGGF-EVLETSAAYWRGDEERETLTRVYGTAFPTESDLQEYLARR 235

Query: 239 EESEKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
           EE+++RDHRKL REMDLF I +  G G+  +H  G  + + L  Y+R    +  Y+E+ T
Sbjct: 236 EEAKERDHRKLGREMDLFSIPDVTGPGLPLYHPNGKTVLRELSEYVRGLNSEMGYDEVET 295

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +    LW+QSGH+D+Y  +MF +   D        + LKPMNCPGH  +FN G  SYR
Sbjct: 296 PHLFRTELWKQSGHYDNYVDDMFLLDVND------EEYGLKPMNCPGHATIFNEGSWSYR 349

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +LPVR  E G VYR E  G L GL RV  FT DD HVF   +Q+  E  ++ + I  +  
Sbjct: 350 DLPVRYFEDGKVYRKEQRGELSGLSRVWAFTIDDGHVFARADQIEAEVRRLMDTITEVLD 409

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
            F  +  +  L+TRPEK VGSD +W+ +E  ++ VLD      Q  ++  V  G+GAFYG
Sbjct: 410 TFDLDYEVA-LATRPEKSVGSDDIWEQSERQLREVLD------QQGVDYDVEPGDGAFYG 462

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK ++  +DA+GR W   T+Q+DFN+P RF+  Y  S ++   PVMIHRA++GS ERF  
Sbjct: 463 PKIDFGFEDALGRSWDGPTVQLDFNMPDRFDLEYTGSDNDAHQPVMIHRALYGSYERFFM 522

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           ++IE++ G  P WL+P Q  +  +T   + YA  + N L      +E + R+ T+  KI+
Sbjct: 523 VLIEHYNGRFPTWLAPEQVRILPVTDDNLGYAHRVKNELGD--YRVEVEDRDWTVGKKIQ 580

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +     +P +++ GD E    ++ +R       + V L +    L  E
Sbjct: 581 QAHDDNVPYMLVVGDDEEDADAVSVRDRQEREGKGVDLAEFRAHLDSE 628


>gi|114600756|ref|XP_001153674.1| PREDICTED: threonyl-tRNA synthetase isoform 5 [Pan troglodytes]
          Length = 641

 Score =  541 bits (1394), Expect = e-151,   Method: Composition-based stats.
 Identities = 229/579 (39%), Positives = 330/579 (56%), Gaps = 22/579 (3%)

Query: 2   PSDIKLTFPDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
              IK+T PDG   +      T   +A  IS+ LA   V   +N  V DL  P+  + S+
Sbjct: 80  SKPIKVTLPDGKQVDAESWKTTPYQIACGISQGLADNTVIAKVNNLVWDLDRPLEEDCSL 139

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQP-FSSDE 118
           E++  ED  + AV  HS AHIM EA++ ++    +  GP IE+GFYYD   E+   SS++
Sbjct: 140 ELLKFEDEEAQAVYWHSSAHIMGEAMERVYGGC-LCYGPPIENGFYYDMYLEEGGVSSND 198

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
            + +E   ++II     F +  +  E    +F+     +K  IL         T+YR G 
Sbjct: 199 FSSLEALCKKIIKEKQAFERLEVKKETLLAMFKY--NKFKCRILNEKVNTPTTTVYRCGP 256

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLCRGPHVR TG++K   K+ K +  YW G ++   L RIYG ++   + L ++  F 
Sbjct: 257 LIDLCRGPHVRHTGKIK-ALKIHKNSSTYWEGKADMETLQRIYGISFPDPKMLKEWEKFQ 315

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
           EE++ RDHRK+ R+ +L+   E   G  F+  KG  I+  LI ++R + +   ++E+ TP
Sbjct: 316 EEAKNRDHRKIGRDQELYFFHELSPGSCFFLPKGAYIYNALIEFIRSEYRKRGFQEVVTP 375

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  LW  SGHW  Y  NMF+ +       +   FALKPMNCPGH  +F+H  +S+RE
Sbjct: 376 NIFNSRLWMTSGHWQHYSENMFSFEV------EKELFALKPMNCPGHCLMFDHRPRSWRE 429

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+RLA+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E     + + ++Y  
Sbjct: 430 LPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSV 489

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF   +  LSTRPEK +G   +WD AE  ++  L+      +      +  G+GAFYGP
Sbjct: 490 FGFSFKLN-LSTRPEKFLGDIEVWDQAEKQLENSLNEFGEKWE------LNSGDGAFYGP 542

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIG 536
           K +  +KDAIGR  QC TIQ+DF LP RFN  YV+    +K  PV++HRA+ GS+ER I 
Sbjct: 543 KIDIQIKDAIGRYHQCATIQLDFQLPIRFNLTYVSHDGDDKKRPVIVHRAILGSVERMIA 602

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLL 575
           I+ EN+ G  P WLSP Q +V  +  +  EYAQ+    L
Sbjct: 603 ILTENYGGKWPFWLSPRQVMVVPVGPTCDEYAQKDFQKL 641


>gi|327356150|gb|EGE85007.1| threonyl-tRNA synthetase [Ajellomyces dermatitidis ATCC 18188]
          Length = 770

 Score =  541 bits (1394), Expect = e-151,   Method: Composition-based stats.
 Identities = 230/696 (33%), Positives = 363/696 (52%), Gaps = 70/696 (10%)

Query: 4   DIKLTFPDG-----SIKNFPVHATGSDVAESISRSLAKKAVAVAING-KVCDLSDPVR-E 56
           DI +T   G     ++       T       I + ++   V   ++G ++ DL  P+  +
Sbjct: 85  DITVTIDIGDSNSSTVIGKAWETTPGSFLRDIPKEISSTVVIAKLDGKELWDLDRPLERD 144

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE--QPF 114
             +  +  +      V  HS AH++ EA +  +    ++ GP    GF+YD   E     
Sbjct: 145 CRVTFLPFDSVEGREVFWHSSAHVLGEACECHY-GCLLSHGPPTPQGFFYDMALESGHVV 203

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
              +   ++ K   I     PF +  +S E  +++F   K  YK+  + ++   E+ T+Y
Sbjct: 204 KEGDWPALDAKAARIFKEKQPFDRLEVSKEDLKKMFAYSK--YKLHYINNLVEGESSTVY 261

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
           R G   DLCRGPH++ TG++K   K+M+ + AY+ GD +   L RI G A+  ++++ ++
Sbjct: 262 RCGTLVDLCRGPHIQHTGKIKI-MKIMQNSAAYFLGDQSNDALQRIRGVAFPDKKQMQEH 320

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEE 293
           L FLEE+EKR+H ++ ++ DLF   E   G  F    G KIF  L   +R +  K  Y+E
Sbjct: 321 LKFLEEAEKRNHLRIGKDQDLFFFDEVSPGCPFLLPNGTKIFNALQKLLRSEYLKRGYQE 380

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           + +P + D  +W+QSGHW  Y+ +MF +        + RT+ALKPMNCPGH  +F H  +
Sbjct: 381 VQSPNMYDVGIWRQSGHWQHYKDDMFKL------DIEKRTWALKPMNCPGHAIMFGHKER 434

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYRELP+R+A+FG ++RNE SG+LHGL RVR F QDD H+FCT++Q+  E   + + + +
Sbjct: 435 SYRELPIRMADFGVLHRNEASGALHGLTRVRKFQQDDTHIFCTEDQIMKEIDGLFDFLRA 494

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           IY  FGF    +KLSTRPEK +G    W+ AE+ ++  L   K +     +  V  G+GA
Sbjct: 495 IYGLFGF-SFKLKLSTRPEKYMGKIETWNYAEDQLRAALTKFKGN-----DWEVEEGDGA 548

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS------------------ 515
           FYGPK +  ++DA+ R++QC TIQ+D+ +P  F   Y+   +                  
Sbjct: 549 FYGPKIDITIQDALKREFQCATIQLDYQMPVNFKLEYMTGETGAKAKPTEKPAENPDEKP 608

Query: 516 -------------------EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI 556
                               +  PV+IHRA+ GS ERF GI+IE+F G  P WLSP Q +
Sbjct: 609 AGDAAKPDAPPTNSDEPGPGRARPVVIHRAIIGSFERFFGIIIEHFGGKWPFWLSPRQIL 668

Query: 557 VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASE 616
           +  +  +  +Y +E+  +LK   L+++ D    T+  KIR   I +   I + G +E S 
Sbjct: 669 IVPVMPAINDYVEELQQILKGDKLNVDIDISGNTMQKKIRTGQIAQYNFIFVVGAQEKST 728

Query: 617 RSIGIRRFGSTTTQK----VSLLDA---IPILTKES 645
           R++ IR     ++Q     V L +A   +  L KE 
Sbjct: 729 RTVNIRNRDDPSSQAKGSLVPLEEARVKLRALRKER 764


>gi|257064333|ref|YP_003144005.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Slackia
           heliotrinireducens DSM 20476]
 gi|256791986|gb|ACV22656.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Slackia
           heliotrinireducens DSM 20476]
          Length = 586

 Score =  541 bits (1394), Expect = e-151,   Method: Composition-based stats.
 Identities = 240/581 (41%), Positives = 353/581 (60%), Gaps = 18/581 (3%)

Query: 67  PRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQIEKK 125
              + V+RHS AHIMA+A++ ++P+     GP  E+GFYYD D  ++  S D+L  IE +
Sbjct: 16  EEEVHVLRHSAAHIMAQAIKRLYPQADFGYGPATENGFYYDVDLGDEKISEDDLPAIEAE 75

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M++I   +  F    L  E+A +  E ++E YKVE +  +     +T Y+QGE+ D+C G
Sbjct: 76  MKKICKENLKFSTYELPREEAIKHMEERQEQYKVEHIGDLDPDARITFYKQGEYVDMCVG 135

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PH+  T  +K F KL  V+GAYW+GD +  ML+RI G A+ +++EL +Y    EE++KRD
Sbjct: 136 PHILYTKALKAF-KLTAVSGAYWKGDKDNKMLTRINGIAFASKEELAEYERIQEEAKKRD 194

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHL 304
           HRK+ +EM+LF  A++G G  FW   G K+   LI Y    + K +Y+E+ TPQ+L + L
Sbjct: 195 HRKIGQEMELFMFADEGPGFPFWLPNGTKLKNALIEYWHDMMAKYNYDEVETPQILSRKL 254

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W+ SGHWD Y+ NM+       T+ D   +A+KPMNCPG   ++    +SYR+LP++LAE
Sbjct: 255 WETSGHWDHYKENMYT------TVIDEEDYAVKPMNCPGACLIYKSRPRSYRDLPLKLAE 308

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
            G  +R+E  G+LHGL RVR FTQDD H++ T EQ+ +  L+   L    Y+ FGFE   
Sbjct: 309 AGLDHRHELKGALHGLFRVRAFTQDDGHIYVTPEQISDIVLETARLFDEYYQQFGFEY-K 367

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           V+LSTRPE  +GSD  W+ AEN ++  L+ +        +  +  G+GAFYGPK ++ LK
Sbjct: 368 VELSTRPEDSMGSDEDWERAENGLREALEKMGK------DYILNEGDGAFYGPKIDFHLK 421

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D +GR WQCGTIQ+DF LP  F   Y+ +   K  P+MIHRA FGS ERFIG++ E + G
Sbjct: 422 DCLGRTWQCGTIQLDFQLPQNFELEYMAADGTKKRPIMIHRAGFGSFERFIGMLTEQYAG 481

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS-IKKI 603
             P WL+P+Q  +  ++    +YA E+  +L+   +    D R+E I YKIRE     ++
Sbjct: 482 KFPTWLAPLQVKILPVSEKTRDYALEVGQVLRDAGVRAVVDTRDEKIGYKIREARSTDRV 541

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P ++I G++E   + I +R   S  T    L + I  +T E
Sbjct: 542 PYMLILGEQERDGKYISVRDR-SNETVARQLDEFIADITAE 581


>gi|315503148|ref|YP_004082035.1| threonyl-tRNA synthetase [Micromonospora sp. L5]
 gi|315409767|gb|ADU07884.1| threonyl-tRNA synthetase [Micromonospora sp. L5]
          Length = 671

 Score =  541 bits (1394), Expect = e-151,   Method: Composition-based stats.
 Identities = 239/638 (37%), Positives = 356/638 (55%), Gaps = 41/638 (6%)

Query: 33  SLAKKAVAVAI-NGKVCDLS-DPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWP 90
           S  K  V V    G++ DL   P  + ++E +T + P  L V+RHS AH++A+AVQ ++P
Sbjct: 33  SGPKAIVVVRDPQGQLRDLDWRPAEDVAVEPVTLDSPDGLNVLRHSTAHVLAQAVQDVFP 92

Query: 91  EVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELF 150
           + ++ IGP IE+GFYYDF  ++PF  D+L ++EK+MQEI+     F ++  + +      
Sbjct: 93  DAKLGIGPPIENGFYYDFGVDKPFQPDDLTKLEKRMQEIVKSGQRFRRRRFA-DLDEARS 151

Query: 151 ESKKEAYKVEILESIPAK-----------ENVTLYRQ-------GEWFDLCRGPHVRSTG 192
           E   E YK+E++E                  +T+Y           W DLCRGPH+ +T 
Sbjct: 152 ELAAEPYKLELIEVKGEGLDSSEVMEVGGGELTIYDNLAANEDKVCWSDLCRGPHLPNTR 211

Query: 193 QVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLARE 252
            +  F KLM+ A AYWRG    P L R+YGTAW T+ EL  YL  LEE+ +RDHRKL  +
Sbjct: 212 LIGAF-KLMRSAAAYWRGSEKNPQLQRVYGTAWPTRDELKAYLKLLEEAARRDHRKLGAD 270

Query: 253 MDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGH 310
           +DLF   ++ GSG+  +H KG  + + +  Y+R R +++ ++ + TP +  + L+  SGH
Sbjct: 271 LDLFSFPDEIGSGLPVFHPKGGVLKRVMEDYVRARHVEEGFDYVGTPHISKEGLFHTSGH 330

Query: 311 WDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYR 370
              Y+  MF          +   + LK MNCP H  ++    +SYR+LP+RL EFG+VYR
Sbjct: 331 LPYYKDTMFPPMEM-----EGSDYYLKAMNCPMHNLIYRSRGRSYRQLPIRLFEFGTVYR 385

Query: 371 NEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR 430
            E SG +HGL RVRGFTQDD+H +CT+EQ  +E   +   ++S+ +DFG +   ++LSTR
Sbjct: 386 YEKSGVIHGLTRVRGFTQDDSHSYCTREQAPSEIKHLLGFVLSLLRDFGIDDFYLELSTR 445

Query: 431 ----PEKRVGSDALWDDAENIMKG-VLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKD 485
               P+K VGSD  W  A  +++   L+T        +      G  AFYGPK     KD
Sbjct: 446 DESKPDKFVGSDEDWATATAVLEQCALET-------GLELVPDPGGAAFYGPKISVQAKD 498

Query: 486 AIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           AIGR WQ  TIQ DFN P  F   Y  +   +  PVMIH A FGSIERFIG++ E++ G 
Sbjct: 499 AIGRTWQMSTIQYDFNQPKGFGLEYQAADGTRQQPVMIHCAKFGSIERFIGVLTEHYAGA 558

Query: 546 LPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPI 605
            P WL+P+Q +   I     +Y  + A  L+ H +  E D  ++ +  KIR    +KIP 
Sbjct: 559 FPAWLAPVQVVGIPIRDEHGDYLVDFAATLRRHGVRAEVDLGDDRMQKKIRNAQQQKIPF 618

Query: 606 IIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           ++I GD + +  ++  R    +    V + +A+  + +
Sbjct: 619 MVIAGDDDVAAGTVSFRYRDGSQRNGVPVDEAVAHVRE 656


>gi|297243465|ref|ZP_06927397.1| threonyl-tRNA synthetase [Gardnerella vaginalis AMD]
 gi|296888510|gb|EFH27250.1| threonyl-tRNA synthetase [Gardnerella vaginalis AMD]
          Length = 660

 Score =  541 bits (1393), Expect = e-151,   Method: Composition-based stats.
 Identities = 245/630 (38%), Positives = 364/630 (57%), Gaps = 37/630 (5%)

Query: 36  KKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           K  +AV +NG++ DL  P+ +G ++E +  +    +A++RHS  H+MA+AVQ I P+ ++
Sbjct: 15  KNIIAVRLNGELRDLYTPLHDGDTVESVALDSEDGIAIMRHSATHVMAQAVQEIRPDAKL 74

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            +GP+I+DGFYYDFD + PF+ D+L QIEK MQ II     F ++ ++ ++AR   E   
Sbjct: 75  GVGPVIKDGFYYDFDVDTPFTPDDLKQIEKHMQRIIKESQSFRRRVVTEDEARA--EEAN 132

Query: 155 EAYKVEILESIPA-----------KENVTLY----RQGE--WFDLCRGPHVRSTGQVKKF 197
           + YK+E++    A           K  +++Y    R+G   W DLCRGPH+ +T  +K F
Sbjct: 133 QPYKLELIGDKEAALDPAAAGEISKHELSMYDNLDREGNKVWSDLCRGPHLPNTRYIKAF 192

Query: 198 FKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFH 257
            KL +VA AYWRG  + PML RIYGTAW +++EL  Y   +EE+ KRDHRKL +EMDLF 
Sbjct: 193 -KLERVAAAYWRGSEHNPMLQRIYGTAWPSKEELKAYTTRMEEAAKRDHRKLGQEMDLFS 251

Query: 258 IAED-GSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYR 315
             ++ G G+  +H KG  I   +  Y R + +   Y  + TP +    L++ SGH   Y+
Sbjct: 252 FPDEIGPGLAVFHPKGAAIINAMEDYSREQHRKHHYSFVQTPHITKGGLYETSGHLQWYK 311

Query: 316 ANMFAVKCADDT-------IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV 368
             M+     D+         +    + LKPMNCP H  +F    +SYRELP+RL EFG+V
Sbjct: 312 DGMYPPMKLDEERDENGNVTRQGADYYLKPMNCPMHNLIFKSRQRSYRELPLRLFEFGTV 371

Query: 369 YRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLS 428
           YR E SG +HGL RVRG TQDD+H++CT+EQM +E   + N ++ + KDFG     ++LS
Sbjct: 372 YRYEKSGVVHGLTRVRGLTQDDSHIYCTREQMRDELKSLLNFVLGLLKDFGLNDFYLELS 431

Query: 429 TRPEK-RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAI 487
           T+ E   VGSD +W++A N +  V        +  +      G  AFYGPK     +DAI
Sbjct: 432 TKDEHKFVGSDEIWEEATNTLAEVAK------ESGLELVDDPGGAAFYGPKISVQARDAI 485

Query: 488 GRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           GR WQ  TIQ+DFNLP RF   Y+ +      PVMIHRA+FGSIERF  I++E++ G  P
Sbjct: 486 GRTWQVSTIQLDFNLPERFKLEYIAADGSHQRPVMIHRALFGSIERFFAILLEHYAGAFP 545

Query: 548 LWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIII 607
            WL+P+Q     +      + Q++ + L+ + +  E D  ++    KIR  S  K+P  +
Sbjct: 546 AWLAPVQVTGVPVADEFAPHLQKLISDLEENMVRCEMDNSDDRFGKKIRNASKSKVPFTL 605

Query: 608 ICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
           I G+++ +  ++  R    +    V +  A
Sbjct: 606 IAGEEDVNNNAVSFRFRDGSQLNGVPVSQA 635


>gi|55379994|ref|YP_137844.1| threonyl-tRNA synthetase [Haloarcula marismortui ATCC 43049]
 gi|55232719|gb|AAV48138.1| threonyl-tRNA synthetase [Haloarcula marismortui ATCC 43049]
          Length = 672

 Score =  541 bits (1393), Expect = e-151,   Method: Composition-based stats.
 Identities = 228/646 (35%), Positives = 355/646 (54%), Gaps = 23/646 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           S + +T PDG+       +T  DVA  I   L    VA  ++G++ D   P+  +  +EI
Sbjct: 32  STVTVTLPDGTPLEVERGSTVEDVAYEIGPGLGDDTVAGVVDGELVDKHAPLTADVELEI 91

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +T      L V+RHS AH+ A+A+Q ++ + ++ IGP  ++GFYYD         D+L  
Sbjct: 92  VTESSDEYLDVLRHSAAHVFAQALQRLYSDAKLTIGPWTDNGFYYDITGVD-IDEDDLEA 150

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE-SIPAKENVTLYRQGEWF 180
           IE + +EII  D    ++ +  + A E +E  +  +K +ILE      E V+ Y QGE+ 
Sbjct: 151 IEAEAEEIIEEDLDIERELVDRDDAFERYEDNQ--FKQDILETEAADDEEVSFYTQGEFE 208

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLC+GPHV STG++  F  L +++ A+WRG+     L+R+YGTA+ T+  L ++L    +
Sbjct: 209 DLCQGPHVESTGEIGGFALL-EISAAFWRGEEENETLTRVYGTAFPTEDALDEFLEQRRK 267

Query: 241 SEKRDHRKLAREMDLFHIAEDG-SGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           +E+RDHRK+ +EMDLF I E    G+  +   G KI   L  Y+        Y+E+ TP 
Sbjct: 268 AEERDHRKIGQEMDLFSIDETTGPGLPLYEPNGKKILNELSDYVAGLNRDAGYDEVETPH 327

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    LW++SGH+++Y  +MF +   D        + LKPMNCPGH  +F     SYR+L
Sbjct: 328 VFRTELWKKSGHYENYVDDMFLLDVND------EEYGLKPMNCPGHATIFEQNSWSYRDL 381

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           PVR  E G VYR E  G L GL R   FT DD H+F   +Q+  E L   ++I+     F
Sbjct: 382 PVRYFEDGKVYRKEQRGELSGLSRTWAFTIDDGHLFVRPDQIEEEVLATVDIILDTLDTF 441

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
             +  +   +TRPEK VG D +W+ AE+ ++ VL+      +  I+  V  G+GAFYGPK
Sbjct: 442 NLDYTVQF-ATRPEKSVGGDEIWEKAESQLESVLE------EQDIDYVVEEGDGAFYGPK 494

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++  +DA+GR W   T+Q+DFN+P RF+  Y    +E+  PVMIHRA++GS ERF  ++
Sbjct: 495 IDFAFEDALGRHWDGPTVQLDFNMPERFDLSYTGEDNEEHRPVMIHRALYGSYERFFMVL 554

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
            E++ G  P WL+P Q  +  ++   + Y +EI + L      +  + R+ T+  KI++ 
Sbjct: 555 TEHYNGKFPPWLAPEQIRLLPVSDDNITYCEEIQDELDD--FRVTIEDRSWTVGKKIQQA 612

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
              ++P + + GD E    +I +R       + + + +    L  E
Sbjct: 613 HDDRVPYMCVIGDNEEEAGTISVRDRKEREEKDIDIAEFRDHLETE 658


>gi|311113703|ref|YP_003984925.1| threonine--tRNA ligase [Rothia dentocariosa ATCC 17931]
 gi|310945197|gb|ADP41491.1| threonine--tRNA ligase [Rothia dentocariosa ATCC 17931]
          Length = 678

 Score =  541 bits (1393), Expect = e-151,   Method: Composition-based stats.
 Identities = 251/676 (37%), Positives = 376/676 (55%), Gaps = 54/676 (7%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SI 59
           + + IK+     S+       T +  AE  + +   K V   +NG + DLS  + EG ++
Sbjct: 6   LSAPIKI-----SVSGEEREVTAATAAELFADNA--KIVVARVNGTLVDLSHKLSEGDTV 58

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           E +  ++P  L V+RHS AH+MA+AVQ    + ++ IGP I DGFY+DFD  +PF+ ++L
Sbjct: 59  EPVFIDEPDGLNVLRHSAAHVMAQAVQEYRKDAKLGIGPYITDGFYFDFDVAEPFTPEDL 118

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE---------------- 163
            +IEK M +II     F ++ ++H++A E  E K E YK+E+L                 
Sbjct: 119 KKIEKSMIKIIKSGQLFRRRVVTHDEAVE--EMKNEPYKLELLSLSQGPGSGADAAEGAS 176

Query: 164 -SIPAKENVTLY-----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRP 215
             + A E +T+Y     + GE  W DLCRGPH+ +T  +   + LM+  GAYWRG    P
Sbjct: 177 VEVGAGE-ITIYDNVHPKTGEVLWNDLCRGPHLPNTKLIANGYALMRAGGAYWRGSEKNP 235

Query: 216 MLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWK 274
           ML RIYGTAW T+ EL +Y + + E+E+RDHR+L +E+DLF   ++ G G+   H KG  
Sbjct: 236 MLQRIYGTAWPTKDELVEYKHRIAEAERRDHRRLGKELDLFSFPKNIGPGLPVIHPKGGV 295

Query: 275 IFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           I + +  Y+R R I + ++ ++TP +  + L+  SGH   Y   MF     D+       
Sbjct: 296 IKREMEDYVRARHIAEGFQYVSTPHISKEDLFYTSGHLPYYADGMFPAMVLDNG-----N 350

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
           + LK MNCP H  ++    +SYRELP+R  EFG+VYR+E SG L GL RVR  TQDD+H 
Sbjct: 351 YRLKAMNCPMHNEIYRSRGRSYRELPLRFFEFGTVYRDEKSGVLQGLTRVRMITQDDSHS 410

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP------EKRVGSDALWDDAENI 447
           + TKEQ  +E   + N ++S+ +DFG     ++LSTR       +K +G+D  W+ A  +
Sbjct: 411 YVTKEQAPDEVRHLLNFMLSLLEDFGMTDFYLELSTRDTEGDKKDKFIGTDEQWEQATAV 470

Query: 448 MKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFN 507
           ++ V           +      G  AFYGPK     KDAIGR WQ  T+Q DFN PSRF 
Sbjct: 471 LEQVAQETG------LELVPDPGGAAFYGPKISVQAKDAIGRTWQMSTVQYDFNQPSRFG 524

Query: 508 AFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEY 567
             Y  +      PVMIH A FGSIERF+G++ E++ G  P WLSP+Q I   +  +  +Y
Sbjct: 525 LEYQAADGSIQEPVMIHSAKFGSIERFLGVLTEHYAGAFPAWLSPVQVICVPVAEAFNDY 584

Query: 568 AQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGST 627
             EIA+ L+   + +E D+ ++    KIR  S +K+P I+I G ++A   ++  R  G+ 
Sbjct: 585 MTEIADKLREQGVRVEVDYGSDRFTKKIRTASTEKVPFILIAGGEDAEAGAVSFRFRGNK 644

Query: 628 TTQKVSLLDAIPILTK 643
               V + +A+  + +
Sbjct: 645 QENGVPVDEAVARIVE 660


>gi|315444753|ref|YP_004077632.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Mycobacterium
           sp. Spyr1]
 gi|315263056|gb|ADT99797.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Mycobacterium
           sp. Spyr1]
          Length = 695

 Score =  541 bits (1393), Expect = e-151,   Method: Composition-based stats.
 Identities = 236/660 (35%), Positives = 361/660 (54%), Gaps = 42/660 (6%)

Query: 17  FPVHATGSDVAESI---SRSLAKKAVAVA-INGKVCDLSD-PVREGSIEIITPEDPRSLA 71
                T           SR      V V   +G++ DLS  P  +  +  +  +     +
Sbjct: 15  VTAGTTAGQAVRDAGLPSRGAPDAVVVVRDADGRLRDLSWVPDTDVEVTPVAADTEDGRS 74

Query: 72  VIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIA 131
           VIRHS AH++A+AVQ ++P+ ++ IGP I DGFYYDFD  +PF+ + L  +EKKM++I+ 
Sbjct: 75  VIRHSAAHVLAQAVQEMFPDAKLGIGPPITDGFYYDFDVAEPFTPEHLQALEKKMRKIVK 134

Query: 132 RDSPFLKQYL-SHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE------------ 178
               F ++   S ++AR   E   E YK+E+++     E+  +   G             
Sbjct: 135 DGQIFERRVFGSKDEARA--ELASEPYKLELIDDKSGAEDPEVMEVGGDELTAYDNLNPR 192

Query: 179 -----WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQ 233
                W DLCRGPH+ +T  +  F        AYWRGD N   L RIYGTAW +Q+ L +
Sbjct: 193 TRERVWGDLCRGPHIPTTRYIPAFTLTRSS-AAYWRGDQNNASLQRIYGTAWESQEALDR 251

Query: 234 YLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD-DY 291
           +L  +EE+++RDHRKL  E+DLF   ++ GSG+  +H KG  + + L  Y RRK  +  Y
Sbjct: 252 HLELIEEAQRRDHRKLGVELDLFSFPDELGSGLPVFHPKGGVVRRELEEYSRRKHIEAGY 311

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD-------LRTFALKPMNCPGH 344
           E +NTP +  + L+  SGH + Y   MF     D    +        + + LKPMNCP H
Sbjct: 312 EFVNTPHITKEQLYITSGHLEWYADGMFPPMQIDAEYNEDGTVRKPGQDYYLKPMNCPMH 371

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             ++    +SYRELP+RL EFGSVYR E SG +HGL RVRG TQDDAH++CT+E+M +E 
Sbjct: 372 HLIYRSRGRSYRELPLRLFEFGSVYRYEKSGVIHGLTRVRGMTQDDAHIYCTREEMRDEL 431

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            ++   ++ +  D+G +   ++LST+     VGSD LW++A   ++ V ++        +
Sbjct: 432 ARLLQFVLDLLADYGLDDFYLELSTKDPDKFVGSDDLWEEATETLREVAESSG------L 485

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
                 G  AFYGPK    ++DA+GR+WQ  TIQ+DFN+P RF   Y +S   +  PV+I
Sbjct: 486 ALVPDPGGAAFYGPKISVQVRDALGRNWQMSTIQLDFNMPDRFELEYTSSDGTRRRPVLI 545

Query: 524 HRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIE 583
           HRA+FGSIERF G++ E++ G  P+WL+P+Q +   +  +   Y   +A  L+   + +E
Sbjct: 546 HRALFGSIERFFGVLTEHYAGAFPVWLAPVQVVGIPVAVAHAGYLDGVAAELRRRGIRVE 605

Query: 584 TDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            D  ++ +  KI  H+ +K+P +++ GDK+    ++  R    T    V    A+  +  
Sbjct: 606 VDASDDRMAKKIVNHTNQKVPFMLLAGDKDVEAGAVSFRFGDRTQINGVPRDQAVEAIVD 665


>gi|118618602|ref|YP_906934.1| threonyl-tRNA synthetase [Mycobacterium ulcerans Agy99]
 gi|166225468|sp|A0PSZ4|SYT_MYCUA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|118570712|gb|ABL05463.1| threonyl-tRNA synthetase ThrS [Mycobacterium ulcerans Agy99]
          Length = 691

 Score =  541 bits (1393), Expect = e-151,   Method: Composition-based stats.
 Identities = 246/645 (38%), Positives = 364/645 (56%), Gaps = 38/645 (5%)

Query: 28  ESISRSLAKKAVAVAIN--GKVCDLSD-PVREGSIEIITPEDPRSLAVIRHSCAHIMAEA 84
             + R  A  A+ V  +  GK+ DLS  P  +  +  I        +VIRHS AH++A+A
Sbjct: 35  AGLPRRGAPDAIVVVRDAEGKLRDLSWVPDADAEVTPIAANTDDGRSVIRHSTAHVLAQA 94

Query: 85  VQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYL-SH 143
           VQ ++P+ ++ IGP I DGFYYDF+  +PF+ D+L  +EK+M++I+     F ++   S 
Sbjct: 95  VQDLFPQAKLGIGPPITDGFYYDFEVLEPFTPDDLQALEKRMRQIVKEGQLFDRRVFESK 154

Query: 144 EKARELFESKKEAYKVEILESIPAKENV--------TLY-------RQGEWFDLCRGPHV 188
           ++ARE  E   E YKVE+++      +V        T Y       R+  W DLCRGPH+
Sbjct: 155 DQARE--ELANEPYKVELVDDKSGDPDVMEVGGDELTAYDNLNPRTRERVWGDLCRGPHI 212

Query: 189 RSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRK 248
            +T  +  F KL + + AYWRGD     L RIYGTAW +Q+ L  ++  +EE+++RDHRK
Sbjct: 213 STTKHIPAF-KLTRSSAAYWRGDQKNASLQRIYGTAWESQEALDTHIELIEEAQRRDHRK 271

Query: 249 LAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ 306
           L  E+DLF   ++ GSG+  +H KG  + + L  Y RRK  +  Y+ +N+P +    L+ 
Sbjct: 272 LGVELDLFSFPDEIGSGLAVFHPKGGIVRRELEDYSRRKHTEAGYQFVNSPHITKAQLFH 331

Query: 307 QSGHWDSYRANMFAVKCADDT-------IKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            SGH D Y   MF     D          K  + + LKPMNCP H  +F    +SYRELP
Sbjct: 332 TSGHLDWYADGMFPPMQIDAEYNTDGTVRKPGQDYYLKPMNCPMHCLIFRARGRSYRELP 391

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +RL EFG+VYR E SG +HGL RVRG T DDAH+FCT+EQM +E   +   ++ +  D+G
Sbjct: 392 LRLFEFGTVYRYEKSGVVHGLTRVRGLTMDDAHIFCTREQMRDELRSLLRFVLDLLSDYG 451

Query: 420 FEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
                ++LST+     VGSD +W++A N++  V       ++  +      G  AFYGPK
Sbjct: 452 LTDFYLELSTKDPDKFVGSDEVWEEATNVLAEV------GAESSLELVPDPGGAAFYGPK 505

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
               +KDA+GR WQ  TIQ+DFN P RF   Y  +   +  PVMIHRA+FGSIERF GI+
Sbjct: 506 ISVQVKDALGRTWQMSTIQLDFNFPERFGLEYTAADGTRQRPVMIHRALFGSIERFFGIL 565

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
            E++ G  P WL+P+QA+   +    + Y  ++A  LKSH + +E D  ++ +  KI  H
Sbjct: 566 TEHYAGAFPAWLAPVQAVGIPVADEHIAYLGQVAAQLKSHGVRVEVDTSDDRMAKKIVHH 625

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           + +K+P +++ GD++    ++  R    T    V    A+  +  
Sbjct: 626 TNQKVPFMLLAGDRDVQADAVSFRFGDRTQINGVPREAAVAAIVD 670


>gi|226293450|gb|EEH48870.1| threonyl-tRNA synthetase [Paracoccidioides brasiliensis Pb18]
          Length = 738

 Score =  540 bits (1392), Expect = e-151,   Method: Composition-based stats.
 Identities = 225/688 (32%), Positives = 362/688 (52%), Gaps = 62/688 (9%)

Query: 4   DIKLTFPDG-----SIKNFPVHATGSDVAESISRSLAKKAVAVAING-KVCDLSDPVR-E 56
           DI +T   G     ++       T       I + ++   V   ++  ++ DL  P+  +
Sbjct: 61  DINITVDVGDSHPSTVIGRAWETTPGSFLRDIPKEISSTVVVAKLDDKELWDLDRPLERD 120

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE--QPF 114
             +  +  +      V  HS AH++ EA +  +    ++ GP    GF+YD   E     
Sbjct: 121 CRVSFLPFDSSEGREVFWHSSAHVLGEACECYY-GCLLSHGPPTPQGFFYDMALEPGHVV 179

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
              +   ++ K   I     PF +  +S E  +++F   K  +K+  + ++   E+ T+Y
Sbjct: 180 KESDWPALDSKSVRIFKEKQPFDRLEVSKENLKKMFAYSK--FKLHYINNLVEGESSTVY 237

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
           R G   DLCRGPH+++TG++K   K+M+ + AY+ GD +   L RI G A+  ++++ ++
Sbjct: 238 RCGTLVDLCRGPHIQNTGKIK-VMKIMQNSAAYFLGDQSNDTLQRIRGVAFPDKKQMQEH 296

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEE 293
           L FLEE+EKR+H ++ +E DLF   E   G  F    G KI   L S +R + +   Y+E
Sbjct: 297 LKFLEEAEKRNHLRIGKEQDLFFFDEVSPGCPFLLPNGTKIINALQSLLRAEYRKRGYQE 356

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           + +P + D  +W+QSGHW  Y+ +MF +        + R +ALKPMNCPGH  +F H  +
Sbjct: 357 VQSPNMYDVGIWRQSGHWAHYKDDMFKLDV------EKREWALKPMNCPGHAVMFGHRER 410

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYRELP+R+A+FG ++RNE SG+LHGL RVR F QDD H+FCT++Q+  E   + + + S
Sbjct: 411 SYRELPLRIADFGVLHRNEASGALHGLTRVRKFQQDDTHIFCTEDQIMQEIDGLFDFLRS 470

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           +Y  FGF    +KLSTRPEK +G    W+ AE  ++  L   K +     +  V  G+GA
Sbjct: 471 VYGLFGF-SFKLKLSTRPEKYMGKLETWNYAEEQLRAALTKFKGN-----DWEVDEGDGA 524

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE----------------- 516
           FYGPK +  ++DA+ R++QC TIQ+D+ +P  F   Y+   +                  
Sbjct: 525 FYGPKIDITIQDALKREFQCATIQLDYQMPVNFKLEYMTGETGAKAKPADKTTEDAANPD 584

Query: 517 ------------KCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA 564
                       +  PV+IHRA+ GS ERF+GI+IE+F G  P WLSP Q ++  +  + 
Sbjct: 585 APSTSSNEPGPGRARPVVIHRAIIGSFERFLGIIIEHFGGKWPFWLSPRQILIVPVMPAV 644

Query: 565 VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRF 624
            +Y +E+  +L+   L+++ D    T+  KIR   I +   I + G +E + R++ IR  
Sbjct: 645 NDYVEELREILRGDKLNVDIDISGNTMQKKIRSGQIAQYNFIFVVGAQEKATRTVNIRNR 704

Query: 625 GSTTTQK----VSLLDA---IPILTKES 645
              ++Q     V L +A   +  L KE 
Sbjct: 705 DDPSSQVKGSLVPLEEARVKLRALRKER 732


>gi|283783304|ref|YP_003374058.1| threonine--tRNA ligase [Gardnerella vaginalis 409-05]
 gi|283441631|gb|ADB14097.1| threonine--tRNA ligase [Gardnerella vaginalis 409-05]
          Length = 676

 Score =  540 bits (1392), Expect = e-151,   Method: Composition-based stats.
 Identities = 250/663 (37%), Positives = 373/663 (56%), Gaps = 43/663 (6%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           + I +T  +   K      TG+ +         K  +AV +NG++ DL   + +G ++E 
Sbjct: 4   NTISITV-NEERKEVDASFTGAQLFAE-----DKNIIAVRLNGELRDLYTSLHDGDTVES 57

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +  +    +A++RHS  H+MA+AVQ I P+ ++ +GP+I+DGFYYDFD + PF+ D+L Q
Sbjct: 58  VALDSEDGIAIMRHSATHVMAQAVQEIRPDAKLGVGPVIKDGFYYDFDVDTPFTPDDLKQ 117

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPA-----------KEN 170
           IEK MQ II     F ++ ++ ++ARE  E   + YK+E++    A           K  
Sbjct: 118 IEKHMQHIIKESQSFRRRVVTEDEARE--EEANQPYKLELIGDKEAALDPAASGEISKHE 175

Query: 171 VTLY----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTA 224
           +++Y    R+G   W DLCRGPH+ +T  +K F KL +VA AYWRG    PML RIYGTA
Sbjct: 176 LSMYDNVDREGNKVWSDLCRGPHLPNTRYIKAF-KLERVAAAYWRGSEQNPMLQRIYGTA 234

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM 283
           W +++EL  Y   +EE+ KRDHRKL +EMDLF   ++ G G+  +H KG  I   +  Y 
Sbjct: 235 WPSKEELKAYTTRMEEAAKRDHRKLGQEMDLFSFPDEIGPGLAVFHPKGAAIINAMEDYS 294

Query: 284 RRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT-------IKDLRTFA 335
           R + +   Y  + TP +    L++ SGH   Y+  M+     D+         +    + 
Sbjct: 295 REQHRKHHYSFVQTPHITKGGLYETSGHLQWYKDGMYPPMKLDEERDENGNVTRQGADYY 354

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC 395
           LKPMNCP H  +F    +SYRELP+RL EFG+VYR E SG +HGL RVRG TQDD+H++C
Sbjct: 355 LKPMNCPMHNLIFKSRQRSYRELPLRLFEFGTVYRYEKSGVVHGLTRVRGLTQDDSHIYC 414

Query: 396 TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDT 454
           T+EQM +E   + N ++ + KDFG     ++LST+ E   VGSD +W++A N +  V   
Sbjct: 415 TREQMRDELKSLLNFVLGLLKDFGLNDFYLELSTKDEHKFVGSDEIWEEATNTLAEVAK- 473

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH 514
                +  +      G  AFYGPK     +DAIGR WQ  TIQ+DFNLP RF   Y+ + 
Sbjct: 474 -----ESGLELVDDPGGAAFYGPKISVQARDAIGRTWQVSTIQLDFNLPERFKLEYIAAD 528

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANL 574
                PVMIHRA+FGSIERF  I++E++ G  P WL+P+Q     +      + Q++ + 
Sbjct: 529 GSHQRPVMIHRALFGSIERFFAILLEHYAGAFPAWLAPVQVTGVPVADEFAPHLQKLISD 588

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           L+ + +  E D  ++    KIR  S  K+P  +I G+++ +  ++  R    +    V +
Sbjct: 589 LEENMVRCEMDNSDDRFGKKIRNASKSKVPFTLIAGEEDVNNNAVSFRFRDGSQLNGVPV 648

Query: 635 LDA 637
             A
Sbjct: 649 SQA 651


>gi|154487350|ref|ZP_02028757.1| hypothetical protein BIFADO_01200 [Bifidobacterium adolescentis
           L2-32]
 gi|154083868|gb|EDN82913.1| hypothetical protein BIFADO_01200 [Bifidobacterium adolescentis
           L2-32]
          Length = 677

 Score =  540 bits (1392), Expect = e-151,   Method: Composition-based stats.
 Identities = 246/666 (36%), Positives = 365/666 (54%), Gaps = 44/666 (6%)

Query: 1   MPSD-IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI 59
           M    I +T  +G  K      TG  +         K  +AV +NG+  DL   + +G +
Sbjct: 1   MAEQTISITL-NGEKKEVAADQTGVQLFSD-----DKNIIAVRLNGEPRDLYTELHDGDV 54

Query: 60  -EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
            E I  +    +A++RHS  H+MA+AVQ I P+ ++ +GP+I+DGFYYDFD E PF+ ++
Sbjct: 55  VEPIALDSEDGVAIMRHSATHVMAQAVQEIRPDAKLGVGPVIKDGFYYDFDVETPFTPED 114

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPA----------- 167
           L +IEK+MQ II     F ++ ++ E    L E   + YK+E+++   A           
Sbjct: 115 LKEIEKRMQRIIKSSQSFRRRVVTEE--EALAEEADQPYKLELIKDKEAHLDPEAATEIS 172

Query: 168 KENVTLY----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIY 221
            + ++ Y    R+G   W DLCRGPH+ +T  +K F K+ + A AYWRG    PML RIY
Sbjct: 173 GKELSFYDNVDREGNVVWKDLCRGPHLPNTRYIKAF-KIERSAAAYWRGSEANPMLQRIY 231

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLI 280
           G A+ T+++L  Y   LEE+ KRDHRKL  EMDLF   ++ G G+  +H KG  +   + 
Sbjct: 232 GAAFATKEDLKAYQTRLEEAAKRDHRKLGAEMDLFSFPDEIGPGLAVFHPKGAAVINAME 291

Query: 281 SYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT-------IKDLR 332
            Y R    K  Y  + TP +    L++ SGH   Y+ +M+     D+        IK   
Sbjct: 292 DYSREMHRKHHYSFVQTPHITKGGLYETSGHLQWYKDSMYPPMRLDEEKDENGNVIKQGF 351

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
            + LKPMNCP H  +F    +SYRELP+RL EFG+VYR E SG +HGL RVRG TQDD+H
Sbjct: 352 DYYLKPMNCPMHNLIFKSRQRSYRELPLRLFEFGTVYRYEKSGEVHGLTRVRGLTQDDSH 411

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGV 451
           ++CT+EQM +E   +   ++ + KDFG +   ++LST+     VGSD +W++A N +  V
Sbjct: 412 IYCTREQMKDELKSLLTFVLGLLKDFGLDDFYLELSTKDPHKYVGSDEIWEEATNTLAEV 471

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
                   +  ++        AFYGPK     +DAIGR WQ  TIQ+DFNLP RF   Y+
Sbjct: 472 AK------ESGLDLVDDPCGAAFYGPKISVQARDAIGRTWQVSTIQLDFNLPERFKLEYI 525

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
            +      PVMIHRA+FGSIERF  +++E++ G  P WL+P+Q +   +      + Q+ 
Sbjct: 526 AADGTHQRPVMIHRALFGSIERFFAVLLEHYAGAFPAWLAPVQVLGVPVADEFAPHLQKF 585

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
              L+   +  E D  ++    KIR  S  K P I+I G+++ +  ++  R    +    
Sbjct: 586 IASLEEETVRCEIDLSDDRFGKKIRNASKSKAPFILIVGEEDMNNNAVSFRFRDGSQLNG 645

Query: 632 VSLLDA 637
           V + +A
Sbjct: 646 VPVDEA 651


>gi|295664831|ref|XP_002792967.1| threonyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
 gi|226278488|gb|EEH34054.1| threonyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
          Length = 764

 Score =  540 bits (1392), Expect = e-151,   Method: Composition-based stats.
 Identities = 226/689 (32%), Positives = 362/689 (52%), Gaps = 63/689 (9%)

Query: 4   DIKLTFPDG-----SIKNFPVHATGSDVAESISRSLAKKAVAVAING-KVCDLSDPVR-E 56
           DI +T   G     ++       T       I + ++   V   ++  ++ DL  P+  +
Sbjct: 86  DINITVDVGDSHPSTVIGRAWETTPGSFLRDIPKEISSTVVVAKLDDKELWDLDRPLERD 145

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE--QPF 114
             +  +  +      V  HS AH++ EA +  +    ++ GP    GF+YD   E     
Sbjct: 146 CRVSFLPFDSSEGREVFWHSSAHVLGEACECYY-GCLLSHGPPTPQGFFYDMALEPGHVV 204

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
              +   ++ K   I     PF +  +S E  +++F   K  YK+  + ++   E+ T+Y
Sbjct: 205 KESDWPALDSKSARIFKEKQPFDRLEVSKENLKKMFAYSK--YKLHYINNLVEGESSTVY 262

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
           R G   DLCRGPH+++TG++K   K+M+ + AY+ GD +   L RI G A+  ++++ ++
Sbjct: 263 RCGTLVDLCRGPHIQNTGKIK-VMKIMQNSAAYFLGDQSNDTLQRIRGVAFPDKKQMQEH 321

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEE 293
           L FLEE+EKR+H ++ +E DLF   E   G  F    G KI   L S +R + +   Y+E
Sbjct: 322 LKFLEEAEKRNHLRIGKEQDLFFFDEVSPGCPFLLPNGTKIINALQSLLRAEYRKRGYQE 381

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           + +P + D  +W+QSGHW  Y+ +MF +        + R +ALKPMNCPGH  +F H  +
Sbjct: 382 VQSPNMYDVGIWRQSGHWAHYKDDMFKLDV------EKREWALKPMNCPGHAVMFGHRER 435

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYRELP+R+A+FG ++RNE SG+LHGL RVR F QDD H+FCT++Q+  E   + + + S
Sbjct: 436 SYRELPLRIADFGVLHRNEASGALHGLTRVRKFQQDDTHIFCTEDQIMQEIDGLFDFLRS 495

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           +Y  FGF    +KLSTRPEK +G    W+ AE  ++  L   K +     +  V  G+GA
Sbjct: 496 VYGLFGF-SFKLKLSTRPEKYMGKLETWNYAEEQLRAALTKFKGN-----DWEVDEGDGA 549

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE----------------- 516
           FYGPK +  ++DA+ R++QC TIQ+D+ +P  F   Y+   +                  
Sbjct: 550 FYGPKIDITIQDALKREFQCATIQLDYQMPVNFKLEYMTGETGAKAKPADKTTEDAANPD 609

Query: 517 -------------KCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSS 563
                        +  PV+IHRA+ GS ERF+GI+IE+F G  P WLSP Q ++  +  +
Sbjct: 610 APSTNSSSEPGPGRARPVVIHRAIIGSFERFLGIIIEHFGGKWPFWLSPRQILIVPVMPA 669

Query: 564 AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRR 623
             +Y +E+  +L+   L+++ D    T+  KIR   I +   I + G +E + R++ IR 
Sbjct: 670 VNDYVEELREILRGDKLNVDIDISGNTMQKKIRSGQIAQYNFIFVVGAQEKATRTVNIRN 729

Query: 624 FGSTTTQK----VSLLDA---IPILTKES 645
               ++Q     V L +A   +  L KE 
Sbjct: 730 RDDPSSQAKGSLVPLEEARVKLRALRKER 758


>gi|302866733|ref|YP_003835370.1| threonyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029]
 gi|302569592|gb|ADL45794.1| threonyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029]
          Length = 672

 Score =  540 bits (1392), Expect = e-151,   Method: Composition-based stats.
 Identities = 238/637 (37%), Positives = 356/637 (55%), Gaps = 39/637 (6%)

Query: 33  SLAKKAVAVAI-NGKVCDLS-DPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWP 90
           S  K  V V    G++ DL   P  + ++E +T + P  L V+RHS AH++A+AVQ ++P
Sbjct: 33  SGPKAIVVVRDPQGQLRDLDWRPAEDVAVEPVTLDSPDGLNVLRHSTAHVLAQAVQDVFP 92

Query: 91  EVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELF 150
           + ++ IGP IE+GFYYDF  ++PF  D+L ++EK+MQEI+     F ++  + +      
Sbjct: 93  DAKLGIGPPIENGFYYDFGVDKPFQPDDLTKLEKRMQEIVKSGQRFRRRRFA-DLDEARS 151

Query: 151 ESKKEAYKVEILESIPAK-----------ENVTLYRQ-------GEWFDLCRGPHVRSTG 192
           E   E YK+E++E                  +T+Y           W DLCRGPH+ +T 
Sbjct: 152 ELAAEPYKLELIEVKGEGLDSSEVMEVGGGELTIYDNLAANEDKVCWSDLCRGPHLPNTR 211

Query: 193 QVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLARE 252
            +  F KLM+ A AYWRG    P L R+YGTAW T+ EL  YL  LEE+ +RDHRKL  +
Sbjct: 212 LIGAF-KLMRSAAAYWRGSEKNPQLQRVYGTAWPTRDELKAYLKLLEEAARRDHRKLGAD 270

Query: 253 MDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGH 310
           +DLF   ++ GSG+  +H KG  + + +  Y+R R +++ ++ + TP +  + L+  SGH
Sbjct: 271 LDLFSFPDEIGSGLPVFHPKGGVLKRVMEDYVRARHVEEGFDYVGTPHISKEGLFHTSGH 330

Query: 311 WDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYR 370
              Y+  MF          +   + LK MNCP H  ++    +SYR+LP+RL EFG+VYR
Sbjct: 331 LPYYKDTMFPPMEM-----EGSDYYLKAMNCPMHNLIYRSRGRSYRQLPIRLFEFGTVYR 385

Query: 371 NEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR 430
            E SG +HGL RVRGFTQDD+H +CT+EQ  +E   +   ++S+ +DFG +   ++LSTR
Sbjct: 386 YEKSGVIHGLTRVRGFTQDDSHSYCTREQAPSEIKHLLGFVLSLLRDFGIDDFYLELSTR 445

Query: 431 ----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDA 486
               P+K VGSD+ W  A  +++      +   +  +      G  AFYGPK     KDA
Sbjct: 446 DESKPDKFVGSDSDWATATAVLE------QCGLETGLELVPDPGGAAFYGPKISVQAKDA 499

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNL 546
           IGR WQ  TIQ DFN P  F   Y  +   +  PVMIH A FGSIERFIG++ E++ G  
Sbjct: 500 IGRTWQMSTIQYDFNQPKGFGLEYQAADGTRQQPVMIHCAKFGSIERFIGVLTEHYAGAF 559

Query: 547 PLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPII 606
           P WL+P+Q +   I     +Y  + A  L+ H +  E D  +E +  KIR    +KIP +
Sbjct: 560 PAWLAPVQVVGIPIRDEHGDYLVDFAATLRRHGIRAEVDLGDERMQKKIRNAQQQKIPFM 619

Query: 607 IICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +I GD + +  ++  R    +    V + +A+  + +
Sbjct: 620 VIAGDDDVAAGTVSFRYRDGSQRNGVPVDEAVAHVRE 656


>gi|308234806|ref|ZP_07665543.1| threonyl-tRNA synthetase [Gardnerella vaginalis ATCC 14018]
 gi|311114574|ref|YP_003985795.1| threonine--tRNA ligase [Gardnerella vaginalis ATCC 14019]
 gi|310946068|gb|ADP38772.1| threonine--tRNA ligase [Gardnerella vaginalis ATCC 14019]
          Length = 676

 Score =  540 bits (1392), Expect = e-151,   Method: Composition-based stats.
 Identities = 250/663 (37%), Positives = 372/663 (56%), Gaps = 43/663 (6%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           + I +T  +   K      TG ++         K  +AV +NG++ DL   +  G ++E 
Sbjct: 4   NTISITV-NNERKEVDASFTGVELFAE-----DKNIIAVRLNGELRDLYTSLHNGDTVES 57

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +  +    +A++RHS  H+MA+AVQ I P+ ++ +GP+I+DGFYYDFD + PF+ D+L Q
Sbjct: 58  VALDSEDGIAIMRHSATHVMAQAVQEIRPDAKLGVGPVIKDGFYYDFDVDTPFTPDDLKQ 117

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPA-----------KEN 170
           IEK MQ II     F ++ ++ ++ARE  E   + YK+E++    A           K  
Sbjct: 118 IEKHMQRIIKESQSFRRRVVTEDEARE--EEANQPYKLELIGDKEAALDPAAAGEISKHE 175

Query: 171 VTLY----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTA 224
           +++Y    R+G   W DLCRGPH+ +T  +K F KL +VA AYWRG  + PML RIYGTA
Sbjct: 176 LSMYDNLDREGNKVWSDLCRGPHLPNTRYIKAF-KLERVAAAYWRGSEHNPMLQRIYGTA 234

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM 283
           W +++EL  Y   +EE+ KRDHRKL +EMDLF   ++ G G+  +H KG  I   +  Y 
Sbjct: 235 WPSKEELKAYTTRMEEAAKRDHRKLGQEMDLFSFPDEIGPGLAVFHPKGAAIINAMEDYS 294

Query: 284 RRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT-------IKDLRTFA 335
           R + +   Y  + TP +    L++ SGH   Y+  M+     D+         +    + 
Sbjct: 295 REQHRKHHYSFVQTPHITKGGLYETSGHLQWYKDGMYPPMKLDEERDENGNVTRQGADYY 354

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC 395
           LKPMNCP H  +F    +SYRELP+RL EFG+VYR E SG +HGL RVRG TQDD+H++C
Sbjct: 355 LKPMNCPMHNLIFKSRQRSYRELPLRLFEFGTVYRYEKSGVVHGLTRVRGLTQDDSHIYC 414

Query: 396 TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDT 454
           T+EQM +E   + N ++ + KDFG     ++LST+ E   VGSD +W++A N +  V   
Sbjct: 415 TREQMRDELKSLLNFVLGLLKDFGLNDFYLELSTKDEHKFVGSDEIWEEATNTLAEVAK- 473

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH 514
                +  +      G  AFYGPK     +DAIGR WQ  TIQ+DFNLP RF   Y+ + 
Sbjct: 474 -----ESGLELVDDPGGAAFYGPKISVQARDAIGRTWQVSTIQLDFNLPERFKLEYIAAD 528

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANL 574
                PVMIHRA+FGSIERF  I++E++ G  P WL+P+Q     +      + Q+  + 
Sbjct: 529 GSHQRPVMIHRALFGSIERFFAILLEHYAGAFPAWLAPVQVTGVPVADEFAPHLQKFISD 588

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           L+ + +  E D  ++    KIR  S  K+P  +I G+++ +  ++  R    +    V +
Sbjct: 589 LEENMVRCEMDSSDDRFGKKIRNASKSKVPFTLIAGEEDVNNNAVSFRFRDGSQLNGVPV 648

Query: 635 LDA 637
             A
Sbjct: 649 EQA 651


>gi|66362768|ref|XP_628350.1| threonyl-tRNA synthetase (RNA binding domain TGS+HxxxH+tRNA
           synthetase) [Cryptosporidium parvum Iowa II]
 gi|46229397|gb|EAK90215.1| threonyl-tRNA synthetase (RNA binding domain TGS+HxxxH+tRNA
           synthetase) [Cryptosporidium parvum Iowa II]
          Length = 763

 Score =  540 bits (1392), Expect = e-151,   Method: Composition-based stats.
 Identities = 235/712 (33%), Positives = 366/712 (51%), Gaps = 84/712 (11%)

Query: 3   SDIKLTFPDGSIKN-FPVHATGSDVAESISRSLAKKAVAVAI------------------ 43
             IK+T  +G  ++      +  ++A  IS+ LA+  +   I                  
Sbjct: 59  EPIKITLQNGDQRDGVKFQTSPMEIARQISKKLAESCIVAKIRYNKSLFIEDDEVRGIEE 118

Query: 44  --------------NG-KVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQS 87
                         +G ++ D + P+  +  +EI+T +      V  HS +HI+ + +++
Sbjct: 119 DEEETCCQGHENQSDGWRLWDATRPLEGDCELEILTFDSLEGSGVFWHSSSHILGQCLEN 178

Query: 88  IWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKA 146
            +   QV IGP +  GFYYD +      S+ E + IE   + II+    F +   + E+A
Sbjct: 179 EY-GAQVTIGPALNPGFYYDSYMGTHSVSNTEYSDIENCAKTIISEKQQFERLQCNKEEA 237

Query: 147 RELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAG 205
            ELF+     +KV ++   IP     T+YR G + DLC GPH+  TG VK F K+ K +G
Sbjct: 238 LELFK--DNPFKVSLIMSKIPDGAQTTIYRCGSFVDLCTGPHIPHTGIVKAF-KVTKNSG 294

Query: 206 AYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI-AEDGSG 264
             W G++    L R+YG ++  ++ L +YL  LEE++KRDHR L   + LF   +    G
Sbjct: 295 CNWLGNTENDALQRVYGVSFPDKKRLDEYLNMLEEAKKRDHRLLGSNLQLFFFDSNVSPG 354

Query: 265 VIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKC 323
             FW   G +++  L+ ++R + +  ++ E+ TP +    LW+ SGH+ +Y+ NMF    
Sbjct: 355 SCFWLPAGARLYNKLMDFIRNEYRIREFTEVITPNIFSCDLWKTSGHYFAYKENMFIFDV 414

Query: 324 ADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRV 383
                 + + + LKPMNCPGH  +F H   SYR+LP+RLA+FG ++RNE SG+L+GL RV
Sbjct: 415 ------EEKEWGLKPMNCPGHCVMFKHMNPSYRQLPIRLADFGVLHRNEFSGALNGLTRV 468

Query: 384 RGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDD 443
           R F QDDAH+FCT EQ+  E  K  + +  IY   GF    + LST P++ +G++  W +
Sbjct: 469 RRFQQDDAHIFCTPEQIQEEVFKALDFLFFIYGQLGFT-FDLFLSTMPKEHLGTEEQWKE 527

Query: 444 AENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLP 503
           AEN +K  LD          +  +  G+GAFYGPK + +L DA+ R  QCGTIQ+DF LP
Sbjct: 528 AENALKSALDKTGR------DWKLNPGDGAFYGPKIDIMLWDALKRQHQCGTIQLDFQLP 581

Query: 504 SRFNAFYVNSHSEKC---------------------------HPVMIHRAVFGSIERFIG 536
            RFN  Y    +                               PV+IHRA+ GS+ER   
Sbjct: 582 IRFNLQYRTDENISEESTNQEQPPSHQNADQNPDNSLKQGYRRPVIIHRAILGSVERMSA 641

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +++E+  G LP WLSP QAIV +I+   VEYA+ +   L      +  D+   TIN KIR
Sbjct: 642 VILEHTGGKLPFWLSPRQAIVLSISEKTVEYAKSVERELCRRGFDVSGDYSAATINKKIR 701

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK-VSLLDAIPILTKESLP 647
           E  + +   +++ G+ EA ++ + +R   +T  Q+ ++L   I   +    P
Sbjct: 702 ESQLLQWNYMLVIGENEARDKKVTLRCRDTTIPQELLTLDQLILKFSSMGFP 753


>gi|225684056|gb|EEH22340.1| threonyl-tRNA synthetase [Paracoccidioides brasiliensis Pb03]
          Length = 738

 Score =  540 bits (1392), Expect = e-151,   Method: Composition-based stats.
 Identities = 225/688 (32%), Positives = 362/688 (52%), Gaps = 62/688 (9%)

Query: 4   DIKLTFPDG-----SIKNFPVHATGSDVAESISRSLAKKAVAVAING-KVCDLSDPVR-E 56
           DI +T   G     ++       T       I + ++   V   ++  ++ DL  P+  +
Sbjct: 61  DINITVDVGDSHPSTVIGRAWETTPGSFLRDIPKEISSTVVVAKLDDKELWDLDRPLERD 120

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE--QPF 114
             +  +  +      V  HS AH++ EA +  +    ++ GP    GF+YD   E     
Sbjct: 121 CRVSFLPFDSSEGREVFWHSSAHVLGEACECYY-GCLLSHGPPTPQGFFYDMALEPGHVV 179

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
              +   ++ K   I     PF +  +S E  +++F   K  +K+  + ++   E+ T+Y
Sbjct: 180 KESDWPALDSKSVRIFKEKQPFDRLEVSKENLKKMFAYSK--FKLHYINNLIEGESSTVY 237

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
           R G   DLCRGPH+++TG++K   K+M+ + AY+ GD +   L RI G A+  ++++ ++
Sbjct: 238 RCGTLVDLCRGPHIQNTGKIK-VMKIMQNSAAYFLGDQSNDTLQRIRGVAFPDKKQMQEH 296

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEE 293
           L FLEE+EKR+H ++ +E DLF   E   G  F    G KI   L S +R + +   Y+E
Sbjct: 297 LKFLEEAEKRNHLRIGKEQDLFFFDEVSPGCPFLLPNGTKIINALQSLLRAEYRKRGYQE 356

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           + +P + D  +W+QSGHW  Y+ +MF +        + R +ALKPMNCPGH  +F H  +
Sbjct: 357 VQSPNMYDVGIWRQSGHWAHYKDDMFKLDV------EKREWALKPMNCPGHAVMFGHRER 410

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYRELP+R+A+FG ++RNE SG+LHGL RVR F QDD H+FCT++Q+  E   + + + S
Sbjct: 411 SYRELPLRIADFGVLHRNEASGALHGLTRVRKFQQDDTHIFCTEDQIMQEIDGLFDFLRS 470

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           +Y  FGF    +KLSTRPEK +G    W+ AE  ++  L   K +     +  V  G+GA
Sbjct: 471 VYGLFGF-SFKLKLSTRPEKYMGKLETWNYAEEQLRAALTKFKGN-----DWEVDEGDGA 524

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE----------------- 516
           FYGPK +  ++DA+ R++QC TIQ+D+ +P  F   Y+   +                  
Sbjct: 525 FYGPKIDITIQDALKREFQCATIQLDYQMPVNFKLEYMTGETGAKAKPADKTTEDAANPD 584

Query: 517 ------------KCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA 564
                       +  PV+IHRA+ GS ERF+GI+IE+F G  P WLSP Q ++  +  + 
Sbjct: 585 APSTSSNEPGPGRARPVVIHRAIIGSFERFLGIIIEHFGGKWPFWLSPRQILIVPVMPAV 644

Query: 565 VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRF 624
            +Y +E+  +L+   L+++ D    T+  KIR   I +   I + G +E + R++ IR  
Sbjct: 645 NDYVEELREILRGDKLNVDIDISGNTMQKKIRSGQIAQYNFIFVVGAQEKATRTVNIRNR 704

Query: 625 GSTTTQK----VSLLDA---IPILTKES 645
              ++Q     V L +A   +  L KE 
Sbjct: 705 DDPSSQVKGSLVPLEEARVKLRALRKER 732


>gi|119485182|ref|ZP_01619567.1| threonyl-tRNA synthetase [Lyngbya sp. PCC 8106]
 gi|119457410|gb|EAW38535.1| threonyl-tRNA synthetase [Lyngbya sp. PCC 8106]
          Length = 608

 Score =  540 bits (1391), Expect = e-151,   Method: Composition-based stats.
 Identities = 246/599 (41%), Positives = 359/599 (59%), Gaps = 16/599 (2%)

Query: 53  PVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ 112
           P +   I +    +  +L  IRH+ +HIMA AVQ ++P+ QV IGP IE+GFYYDFD  +
Sbjct: 10  PEQPEKIHLPKTSESETLKKIRHTASHIMAMAVQKLFPKAQVTIGPWIENGFYYDFDSPE 69

Query: 113 PFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVT 172
           PF+  +L  I+K+M +II R  P +++ LS E+A+   E   E YK+EILE +  ++ +T
Sbjct: 70  PFTEKDLKAIQKEMAKIIKRKLPVVREELSREEAKRRIEELGEPYKLEILEGL--EDPIT 127

Query: 173 LYRQGE-WFDLCRGPHVRSTGQVKK-FFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQE 230
           +Y  G+ W+DLC GPHV +T  +     +L  +AGAYWRGD  +  L RIYGTAW T ++
Sbjct: 128 IYYLGDGWWDLCAGPHVENTADIHPKAIELESLAGAYWRGDETKAQLQRIYGTAWETPEQ 187

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMR-RKIK 288
           L +Y    EE+ KRDHRKL +E+ LF      G G+  W  KG  +  TL  +++  ++K
Sbjct: 188 LAEYKRRKEEALKRDHRKLGKELGLFIFADVVGPGLPLWTPKGTVLRSTLEDFLKKEQLK 247

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTI-KDLRTFALKPMNCPGHVAV 347
             Y  + TP +    L++ SGHW  YR +MF +   D+   K  + F LKPMNCP H+ +
Sbjct: 248 RGYLPVVTPHIGRIDLFKASGHWQQYREDMFPMMAEDEEAAKLEQGFVLKPMNCPFHIQI 307

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
           +   L+SYRELP+RLAEFG+VYR E SG L GL RVRGFT DD+H+F T EQ+ +E L +
Sbjct: 308 YKSELRSYRELPIRLAEFGTVYRYEQSGELGGLTRVRGFTVDDSHLFVTPEQLESEFLNV 367

Query: 408 HNLIISIYKDFGFEKIMVKLSTRPEK---RVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            +LI+S++          +LS R  +    +GSD +W+ AE+ +   ++T++      I 
Sbjct: 368 VDLILSVFGKLKLSNFKARLSFRDPESDKYIGSDQVWNKAESAITKAVETLEMDHFLGI- 426

Query: 465 TGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIH 524
                GE AFYGPK ++I +D + R+WQ GT+QVD+NLP RF+  YV     +  PVMIH
Sbjct: 427 -----GEAAFYGPKLDFIFQDVLDREWQLGTVQVDYNLPERFDLEYVAEDGTRQRPVMIH 481

Query: 525 RAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIET 584
           RA FGS+ER IGI+IE + G+ PLWL+PIQ  +  ++   + Y QE+   ++S  +  E 
Sbjct: 482 RAPFGSLERLIGILIEQYAGDFPLWLAPIQVRLLAVSDEFLTYTQEVVEKMRSLDIRAEV 541

Query: 585 DFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           D   E +  +IR    +KIP++ I G KE    S+ IR   S     + + +    +  
Sbjct: 542 DRSRERLGKQIRNAEKEKIPVMAIIGAKEVEANSLSIRTRASGELGTLPVDEVCQRIQN 600


>gi|73748565|ref|YP_307804.1| threonyl-tRNA synthetase [Dehalococcoides sp. CBDB1]
 gi|289432591|ref|YP_003462464.1| threonyl-tRNA synthetase [Dehalococcoides sp. GT]
 gi|123732511|sp|Q3ZXB5|SYT_DEHSC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|73660281|emb|CAI82888.1| threonyl-tRNA synthetase [Dehalococcoides sp. CBDB1]
 gi|288946311|gb|ADC74008.1| threonyl-tRNA synthetase [Dehalococcoides sp. GT]
          Length = 582

 Score =  540 bits (1391), Expect = e-151,   Method: Composition-based stats.
 Identities = 245/574 (42%), Positives = 355/574 (61%), Gaps = 18/574 (3%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           L ++RHS AHIMAEAV S++PE ++ IGP I+ GFYYDFD  +  + ++L +IE +M ++
Sbjct: 14  LEIMRHSAAHIMAEAVLSMFPEAKLGIGPAIDTGFYYDFDLPRTLTPEDLPEIETRMNQL 73

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
           +  + PF ++ +S ++AR+L     + YK+E+L  I   E V++YRQG + DLCRGPHV 
Sbjct: 74  VKSNLPFRREEMSKDEARKL--FANQPYKLELLNDIT-DETVSIYRQGNFCDLCRGPHVN 130

Query: 190 STGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKL 249
            T +VK F KL+ +AGAYWRGD  RPML RIYG A+  +  L +YL  LEE+ KRDHRKL
Sbjct: 131 YTSKVKAF-KLLSIAGAYWRGDEKRPMLQRIYGAAFLDKASLAEYLNMLEEAAKRDHRKL 189

Query: 250 AREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQ 307
            +E++LF + ++ G G++ W   G  +   +  + +   +K  Y+ + TP +    LW+ 
Sbjct: 190 GKELELFSLHQEIGGGLVNWLPNGAIVRHLIEEFWKKEHLKRGYDLVYTPHIAKVDLWKT 249

Query: 308 SGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGS 367
           SGHW  YR NM++         D   + LKPMNC  H+ +F +  +SY+ELP+R+AE G+
Sbjct: 250 SGHWGFYRENMYSPMDI-----DGEEYVLKPMNCVYHILMFKNRTRSYKELPIRMAELGT 304

Query: 368 VYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKL 427
           VYR E SG LHGL RVRGFTQDDAH+FC  +Q+  E +K+ +L   +   FGF K  V L
Sbjct: 305 VYRYERSGVLHGLSRVRGFTQDDAHIFCLYDQLEKEVVKVLDLAKFMIDTFGFTKYKVML 364

Query: 428 STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAI 487
           STRPEK VG    W+ A +I+   L+       ++I   V  GEG FYGPK +   +DA+
Sbjct: 365 STRPEKYVGELDKWEYATDILAKALEA------NQIPYQVDPGEGVFYGPKIDIKFEDAL 418

Query: 488 GRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           GR WQ  TIQVDF LP RF+   V    +     M+HR V GS+ERF+  + E + G  P
Sbjct: 419 GRTWQGPTIQVDFQLPERFDVSVVGEDGKDQPVAMVHRTVLGSMERFMSCLTEQYGGAFP 478

Query: 548 LWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIII 607
            WLSP Q +V  I     E+A+++A  L+   + +E D R+ET+N KIR+  + KIP ++
Sbjct: 479 AWLSPKQVMVIPIADRHTEFAEKLACELREEEVRVEVDSRSETMNQKIRQAQLAKIPYML 538

Query: 608 ICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           + GDKE   +S+ +R   + + Q +   +   +L
Sbjct: 539 VVGDKEIETQSVAVRTR-TGSQQVMPFAEFKSML 571


>gi|260903858|ref|ZP_05912180.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Brevibacterium
           linens BL2]
          Length = 668

 Score =  540 bits (1391), Expect = e-151,   Method: Composition-based stats.
 Identities = 232/658 (35%), Positives = 359/658 (54%), Gaps = 46/658 (6%)

Query: 19  VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSC 77
              TG+++      S  +  VA+ ++G+  DLS  +  G  I  IT + P  L ++RHS 
Sbjct: 16  QGLTGTEIF-----STDRTVVAMWLDGQPVDLSRELAAGDQIAPITIDSPAGLDILRHSA 70

Query: 78  AHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFL 137
           AH+ A+AVQ ++P+ ++ IGP I DG+Y+DFD  +PF+ ++L  I+KK  +I+     F 
Sbjct: 71  AHVTAQAVQDLFPDAKLGIGPYITDGYYFDFDVAEPFTPEDLKAIQKKAAQIVKAGQTFN 130

Query: 138 KQYLSHEKARELFESKKEAYKVEILESIPAK-----------ENVTLYRQGE------WF 180
           +  ++ ++A+       E YK+E++    A              +T+Y   +      W 
Sbjct: 131 RVVVTEDEAKARMA--NEPYKLELINDKGAGSDDSASVEVGAGELTVYENLDRKGEIVWQ 188

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ ST  +   F + + + AYWRGD     L R+YGTAW ++++L  +   L E
Sbjct: 189 DLCRGPHLPSTKLIGNGFAVTRSSAAYWRGDQANASLQRVYGTAWASKEDLKAHQDRLAE 248

Query: 241 SEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQ 298
           +E+RDHRKL  E+DLF   E+ GSG+  +H KG  I + +  Y+R R I++ +E + TP 
Sbjct: 249 AERRDHRKLGAELDLFSFPEELGSGLPVFHPKGGVIKREMEDYVRARHIEEGFEYVGTPH 308

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDT-------IKDLRTFALKPMNCPGHVAVFNHG 351
           +  + L+  SGH   Y  NMF     D+        +K+   + LK MNCP H  +F   
Sbjct: 309 ISKEALYYTSGHLPYYGENMFPPISVDEVRDESGEIVKEGTPYRLKAMNCPMHNLIFRSR 368

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI 411
            +SYRELP+RL EFG+VYR+E SG +HGL RVR  TQDD+H +  +E    E   +   +
Sbjct: 369 GRSYRELPLRLFEFGTVYRDEASGVVHGLTRVRALTQDDSHSYVAQEDAAKEIRHLLEFV 428

Query: 412 ISIYKDFGFEKIMVKLSTRPEK------RVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
           +S+ +DFG     ++LSTR E        +GSD  W +A  +++ V      +S+  +  
Sbjct: 429 LSLLRDFGLNDFYLELSTRDEDGKKKDKFIGSDEQWAEATQVLEEV------ASETGLEL 482

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
               G  AFYGPK     +DAIGR WQ  T+Q+DFN P RF   Y  +   +  PVMIH 
Sbjct: 483 VPDPGGAAFYGPKVSVQARDAIGRTWQMSTVQLDFNQPERFGLEYQAADGTRKQPVMIHS 542

Query: 526 AVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD 585
           A FGSIERF+G++IE++ G  P+WL+P+Q     +     +Y  E+A  LK+  + +E D
Sbjct: 543 AKFGSIERFMGVLIEHYAGAFPVWLAPVQVTCIPVAEEFNDYLAEVAAQLKAAGVRVEID 602

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             ++    KIR  S  K+P ++I G  +    ++  R         VS+ +A+  + +
Sbjct: 603 DSDDRFPKKIRNASKSKVPFVLIAGGDDRDANAVSFRFRDGEQDNGVSVAEAVSRIVE 660


>gi|254365284|ref|ZP_04981329.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis str.
           Haarlem]
 gi|134150797|gb|EBA42842.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis str.
           Haarlem]
          Length = 692

 Score =  540 bits (1391), Expect = e-151,   Method: Composition-based stats.
 Identities = 248/663 (37%), Positives = 369/663 (55%), Gaps = 42/663 (6%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVA-INGKVCDLSD-PVREGSI 59
           PS  ++  P G+     V   G        R      V V   +G + DLS  P  +  I
Sbjct: 16  PSQARIRVPAGTTAATAVGEAGLP-----RRDTPDAIVVVRDADGNLRDLSWVPDVDTDI 70

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
             +        +VIRHS AH++A+AVQ ++P+ ++ IGP I DGFYYDFD  +PF+ ++L
Sbjct: 71  TPVAANTDDGRSVIRHSTAHVLAQAVQELFPQAKLGIGPPITDGFYYDFDVPEPFTPEDL 130

Query: 120 AQIEKKMQEIIARDSPFLKQYL-SHEKARELFESKKEAYKVEILESIPAK--------EN 170
           A +EK+M++I+     F ++   S E+AR   E   E YK+E+++             + 
Sbjct: 131 AALEKRMRQIVKEGQLFDRRVYESTEQARA--ELANEPYKLELVDDKSGDAEIMEVGGDE 188

Query: 171 VTLY-------RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
           +T Y       R+  W DLCRGPH+ +T  +  F KL + + AYWRGD     L RIYGT
Sbjct: 189 LTAYDNLNPRTRERVWGDLCRGPHIPTTKHIPAF-KLTRSSAAYWRGDQKNASLQRIYGT 247

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISY 282
           AW +Q+ L ++L F+EE+++RDHRKL  E+DLF   ++ GSG+  +H KG  + + L  Y
Sbjct: 248 AWESQEALDRHLEFIEEAQRRDHRKLGVELDLFSFPDEIGSGLAVFHPKGGIVRRELEDY 307

Query: 283 MRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT-------IKDLRTF 334
            RRK  +  Y+ +N+P +    L+  SGH D Y   MF     D          K  + +
Sbjct: 308 SRRKHTEAGYQFVNSPHITKAQLFHTSGHLDWYADGMFPPMHIDAEYNADGSLRKPGQDY 367

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
            LKPMNCP H  +F    +SYRELP+RL EFG+VYR E SG +HGL RVRG T DDAH+F
Sbjct: 368 YLKPMNCPMHCLIFRARGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRVRGLTMDDAHIF 427

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLD 453
           CT++QM +E   +   ++ +  D+G     ++LST+  +  VG++ +W++A  ++  V  
Sbjct: 428 CTRDQMRDELRSLLRFVLDLLADYGLTDFYLELSTKDPEKFVGAEEVWEEATTVLAEV-- 485

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS 513
                ++  +      G  AFYGPK    +KDA+GR WQ  TIQ+DFN P RF   Y  +
Sbjct: 486 ----GAESGLELVPDPGGAAFYGPKISVQVKDALGRTWQMSTIQLDFNFPERFGLEYTAA 541

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIAN 573
              +  PVMIHRA+FGSIERF GI+ E++ G  P WL+P+Q +   +    V Y +E+A 
Sbjct: 542 DGTRHRPVMIHRALFGSIERFFGILTEHYAGAFPAWLAPVQVVGIPVADEHVAYLEEVAT 601

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            LKSH +  E D  ++ +  KI  H+  K+P +++ GD++ +  ++  R    T    V+
Sbjct: 602 QLKSHGVRAEVDASDDRMAKKIVHHTNHKVPFMVLAGDRDVAAGAVSFRFGDRTQINGVA 661

Query: 634 LLD 636
             D
Sbjct: 662 RDD 664


>gi|269956448|ref|YP_003326237.1| threonyl-tRNA synthetase [Xylanimonas cellulosilytica DSM 15894]
 gi|269305129|gb|ACZ30679.1| threonyl-tRNA synthetase [Xylanimonas cellulosilytica DSM 15894]
          Length = 672

 Score =  540 bits (1391), Expect = e-151,   Method: Composition-based stats.
 Identities = 233/638 (36%), Positives = 347/638 (54%), Gaps = 38/638 (5%)

Query: 35  AKKAVAVAINGKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQ 93
            K  V   ++G++ DL   +  G+ +E ++  +P  L V+RHS AH++A+AVQ + P+ +
Sbjct: 34  CKDVVVARVDGELWDLDRQIPVGARVEPVSVHEPDGLNVLRHSAAHVLAQAVQQVNPDAK 93

Query: 94  VAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESK 153
           + IGP + DGFYYDFD E PF+ ++L  ++K M  II     F ++ ++ E+AR   E  
Sbjct: 94  LGIGPPVRDGFYYDFDVETPFTPEDLKALDKAMSRIIREGQTFRRRVVTEEEARA--ELG 151

Query: 154 KEAYKVEILESIPAKE----------NVTLYRQG----------EWFDLCRGPHVRSTGQ 193
            E YK+E++      +           +T+Y              W DLCRGPHV ST  
Sbjct: 152 GEPYKLELIGIKGGGDAEESVEVGGAELTIYDNVRGAGRESETVVWKDLCRGPHVPSTRL 211

Query: 194 VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREM 253
           + +  +LM+ A AYWRGD     L R+YGTAW ++  L  +L  L E+E+RDHR++  E 
Sbjct: 212 IGQGVQLMRSAAAYWRGDQKNAQLQRVYGTAWPSKDALKGHLERLAEAERRDHRRIGVEQ 271

Query: 254 DLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHW 311
           DLF   E+ GSG+  +H KG  I + +  Y+R R I++ +  + TP +  + L+  SGH 
Sbjct: 272 DLFSFHENVGSGLPLFHPKGGVIKRVMEDYVRQRHIEEGFSYVGTPHISKEDLFYTSGHL 331

Query: 312 DSYRANMFAVKCADDTIKDLRT---FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV 368
             Y   MF      D          + LK MNCP H  +++   +SYRELP+RL EFGSV
Sbjct: 332 PYYGDTMFPSMEFHDDDHPDAPALKYRLKAMNCPMHNLIYSSRGRSYRELPIRLFEFGSV 391

Query: 369 YRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLS 428
           YR E  G + GL RVRG TQDD+H + T+EQ   E   + + ++S+ KDFG     ++LS
Sbjct: 392 YRYEKGGVVQGLTRVRGLTQDDSHSYVTQEQAPGEVTHLLDFMLSVLKDFGLNDFYLELS 451

Query: 429 TR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           TR    P+K VGSD  W  A  I++ V           +      G  AFYGPK     K
Sbjct: 452 TRDDSKPDKFVGSDEEWAKATAILEQV------GRDSGLELVPDPGGAAFYGPKISVQAK 505

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           DAIGR WQ GT+Q DFN P+RF   Y      +  PVMIH A FGSIERF+G++IE++ G
Sbjct: 506 DAIGRTWQMGTVQYDFNQPARFGLEYTAPDGTRQQPVMIHSAKFGSIERFMGVLIEHYAG 565

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
           + P WL+P+Q +   +  +   Y +++   L +  +  E D  ++    KIR  S +K+P
Sbjct: 566 SFPAWLAPVQVLAVPVAEAFDGYLKDVVAQLTARGIRAEVDLSDDRFAKKIRNASKEKVP 625

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            ++I G ++A   ++  R         V + +A+  + 
Sbjct: 626 FVLIAGGEDADAGAVSFRYRDGRQDNGVPVAEAVERIV 663


>gi|255947314|ref|XP_002564424.1| Pc22g03830 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211591441|emb|CAP97671.1| Pc22g03830 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 741

 Score =  540 bits (1390), Expect = e-151,   Method: Composition-based stats.
 Identities = 225/677 (33%), Positives = 354/677 (52%), Gaps = 51/677 (7%)

Query: 4   DIKLTF------PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-E 56
           +I +T       P  S+       T       + + L+   V   +NG++ DL+ P+  +
Sbjct: 75  EINVTLDIGDGNPPSSVPAKAFETTPGSFLRDVPKDLSANIVIAKVNGELWDLNRPLEKD 134

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE--QPF 114
            S+ ++   +P +     HS AH++  A +  +    ++ GP    GF+YD      +  
Sbjct: 135 CSVLLVPFSNPEARETFFHSSAHVLGLASECEY-GCLLSHGPPTPQGFFYDMAMPDGRVV 193

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
              +   ++ +          F +  +S E  +++F   K  YK+  ++ +   E+ T+Y
Sbjct: 194 READWKALDIRASRSFKEKQSFDRLEVSKENLKKMFAYSK--YKLHYIDKLVTGESSTVY 251

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
           R G   DLCRGPH+++TG++K F K+M+ + AY+ GD +   L RI G A+  ++ + ++
Sbjct: 252 RNGTLVDLCRGPHIQNTGKIKAF-KIMQNSSAYFLGDQSNDSLQRIRGVAFPDKKLMAEH 310

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEE 293
           L FLEE+EKR+H ++ +E +LF   E   G  F    G KIF  L S +R + +   Y+E
Sbjct: 311 LKFLEEAEKRNHLRIGKEQELFFFDEASPGCPFLLPNGTKIFNQLQSLLRSEYRKRGYQE 370

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           + TP + D  +W+ SGHW  Y+ +MF +        + R +ALKPMNCPGH  +F H  +
Sbjct: 371 VQTPNMYDVGVWKTSGHWAHYKDDMFKLDV------EKREWALKPMNCPGHFILFGHRER 424

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYRELP+R+A+FG ++RNE SG+L GL R R F QDD HV     Q+ +E   + + + S
Sbjct: 425 SYRELPMRIADFGVLHRNEASGALSGLTRCRKFQQDDCHVVLASHQIMSEVEGLFDFLQS 484

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           IY  FGF   + KLSTRPEK +G+   WD AE+ +K  L   K       +  +  G+GA
Sbjct: 485 IYGLFGFTFKL-KLSTRPEKYMGALETWDHAEDQLKKALTKFKGD-----DWTINEGDGA 538

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE----------------- 516
           FYGPK +  + DAI R++QC TIQ+D+  P  F   Y+                      
Sbjct: 539 FYGPKIDITIADAIQREFQCATIQLDYQAPINFKMEYMTKEQSQAEQPKEGETKGDELAP 598

Query: 517 -KCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLL 575
            +  PV+IHRA+ GS ERF+GI+IE+F G  P W+SP Q ++  +  +  +YA+E+  +L
Sbjct: 599 GRARPVVIHRAIIGSFERFLGILIEHFGGKWPFWISPRQILIVPVMPAVNDYAEELQKIL 658

Query: 576 KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK---- 631
           +   LS++ D    T+  KIR   + +   I + G  E   RS+ +R      TQK    
Sbjct: 659 QGDKLSVDIDISGNTMQKKIRTGQLAQYNFIFVVGASERETRSVNVRNRDDPATQKQGVM 718

Query: 632 VSLLDA---IPILTKES 645
           V L +    +  L KE 
Sbjct: 719 VPLEEVRIKLKALRKER 735


>gi|124486137|ref|YP_001030753.1| hypothetical protein Mlab_1319 [Methanocorpusculum labreanum Z]
 gi|124363678|gb|ABN07486.1| threonyl-tRNA synthetase [Methanocorpusculum labreanum Z]
          Length = 586

 Score =  540 bits (1390), Expect = e-151,   Method: Composition-based stats.
 Identities = 245/581 (42%), Positives = 358/581 (61%), Gaps = 18/581 (3%)

Query: 67  PRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQIEKK 125
              L VIRH+ AH++A+AV+ ++P      GP  E GFYYD D  +   S  +LA IE++
Sbjct: 16  EEELHVIRHTAAHVLAQAVKRLYPHAAFGYGPATEKGFYYDIDLGDTKLSDTDLAAIEQE 75

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+EI+  +       L   +A +L E +KE YKVE +  +   E ++ ++QGE+ D+C G
Sbjct: 76  MREIVKANLQIKPFILPRAEALKLMEERKEPYKVEHIADLDENEPLSFFQQGEYIDMCTG 135

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PH+  T  +K F KL  ++GAYW+ DS   ML+RI GTA+++ +EL  +L   EE+E+RD
Sbjct: 136 PHLTYTKTLKAF-KLTGLSGAYWKNDSKNKMLTRINGTAFSSGKELEDFLKLQEEAERRD 194

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHL 304
           HRK+ +EM LF  +++G G  F+   G  +  +L+ Y R    ++ Y+EI+TP ++++ L
Sbjct: 195 HRKIGKEMKLFMFSDEGPGFPFFLPNGMIVRNSLLDYWRELHAENGYQEISTPLIMNRCL 254

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W+ SGHWD Y+ NM+A      T  D   + +KPMNCPG V V+ +   SYRELP+RLAE
Sbjct: 255 WETSGHWDHYKDNMYA------TCIDDEDYCIKPMNCPGGVMVYANEPHSYRELPMRLAE 308

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
            G V+R+E  G+LHGL RVR FTQDDAH+F  K Q+ +E   +  LI  +Y  FGFE  +
Sbjct: 309 LGLVHRHELKGTLHGLFRVRCFTQDDAHIFMRKNQISDEIAGVVRLINEVYTKFGFEYFL 368

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
            +LSTRPE  +GSD  W+ A N               ++   +  G+GAFYGPK ++ LK
Sbjct: 369 -ELSTRPENSMGSDEDWEAATNG------LKDALDLLKLPYTINEGDGAFYGPKIDFHLK 421

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D +GR WQCGTIQ+DF +P  F+  YV+ + E+  P+MIHR  FGSIERFIGI+ E+F G
Sbjct: 422 DCLGRTWQCGTIQLDFQMPINFDLAYVDENDERQRPIMIHRVCFGSIERFIGILTEHFAG 481

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS-IKKI 603
             P+WL+P+QA V  +T  +  YA+EI  +LK   +  E D RNE I Y IR+    +++
Sbjct: 482 RFPVWLAPMQAKVLLVTKKSESYAEEIYAMLKDAKIRCELDNRNEKIGYMIRQAHYTERV 541

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P +II G+KE  + ++ IR     T   ++  + +  +T E
Sbjct: 542 PYMIIIGEKELEDHTVSIRTRDGKTV-TMTPEEFLTKITSE 581


>gi|314981048|gb|EFT25142.1| threonyl-tRNA synthetase [Propionibacterium acnes HL110PA3]
 gi|315091876|gb|EFT63852.1| threonyl-tRNA synthetase [Propionibacterium acnes HL110PA4]
          Length = 689

 Score =  540 bits (1390), Expect = e-151,   Method: Composition-based stats.
 Identities = 237/674 (35%), Positives = 358/674 (53%), Gaps = 48/674 (7%)

Query: 4   DIKLTFPD-GSIK--NFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
            I +T    G+ +        TG D+  S      +  VA+ ++G + DL   + +G+ +
Sbjct: 7   SISITLHRSGTSRTQQVDTTTTGLDLFGS-----DRAVVAMRVDGNLVDLQRELHDGAEV 61

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           E +       L +IRHS  H+MA+AVQ ++PEV + IGP I DGFYYDF   +P + + L
Sbjct: 62  EPVEATSEDGLNIIRHSATHVMAQAVQQLYPEVNLGIGPFITDGFYYDFGNIEPVTPEVL 121

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK----------- 168
           +++EK+M+ I+  +  F+++  + E ARE  E   + YK+E++ +               
Sbjct: 122 SELEKRMKRIVKENQRFVRRVTTEESARE--ELADQPYKLELIGTKGKGAEGASVEVGGG 179

Query: 169 -----ENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
                +NV    +  W DLCRGPHV ST  +   F L K + AYW+GD     L RIYGT
Sbjct: 180 ELTIYDNVRRNGEVAWKDLCRGPHVPSTKYLANAFALTKFSAAYWKGDQANDQLQRIYGT 239

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISY 282
           AW ++++L  Y   ++E+E+RDHRKL  E+DLF   E+ G G++ +H KG  +   +  +
Sbjct: 240 AWASREDLAAYQQRIKEAERRDHRKLGAELDLFSFPEEIGPGLVVFHPKGAMLRHLIEEH 299

Query: 283 -MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD-------LRTF 334
            + R ++  +  ++TP++    L+  SGH   Y   MF     D+   +        + +
Sbjct: 300 VIARHMEAGFNFVHTPEITKGGLFHTSGHLPYYAGTMFPPMLVDEERDEEGNVTRAGQEY 359

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
            LK MNCP H  +F    +SYRELP+R  E G  YR E SG +HGL R+RGF QDD+H +
Sbjct: 360 YLKAMNCPMHNLIFRSRGRSYRELPLRFFEMGHDYRYEKSGVVHGLTRMRGFAQDDSHTY 419

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP------EKRVGSDALWDDAENIM 448
           CT+EQ   E  K     +SI  DFG     ++LSTR       EK +GSD  W  A + +
Sbjct: 420 CTREQAPGEIKKQIEFFLSILADFGLNDFYLELSTRESDSAKEEKFIGSDEDWQVATDTL 479

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
             V  +        +      G  AFYGPK    ++DAIGR WQ  TIQ DFN P RF+ 
Sbjct: 480 DQVCRSTG------LQLVPDPGGAAFYGPKVSVQVRDAIGRTWQMSTIQYDFNQPERFDL 533

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYA 568
            Y  +      P+M+H A  GS+ERFIG++ E++ G  P+WLSP+Q  +  +  +  +Y 
Sbjct: 534 EYAAADGTHQRPIMLHSAKLGSVERFIGVLTEHYAGAFPVWLSPVQVRLVPVAEAFNDYV 593

Query: 569 QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
              A +L SH + +ETD  ++    KIR  S  K+P I+I G ++A   ++  R    + 
Sbjct: 594 TGFAEVLGSHGIRVETDLSSDRFGKKIRNASKDKVPFILIAGGEDAEAGAVSFRLRDGSQ 653

Query: 629 TQKVSLLDAIPILT 642
              V L +A+ I+T
Sbjct: 654 INGVVLDEAVRIIT 667


>gi|282853974|ref|ZP_06263311.1| threonine--tRNA ligase [Propionibacterium acnes J139]
 gi|282583427|gb|EFB88807.1| threonine--tRNA ligase [Propionibacterium acnes J139]
          Length = 684

 Score =  540 bits (1390), Expect = e-151,   Method: Composition-based stats.
 Identities = 237/674 (35%), Positives = 358/674 (53%), Gaps = 48/674 (7%)

Query: 4   DIKLTFPD-GSIK--NFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
            I +T    G+ +        TG D+  S      +  VA+ ++G + DL   + +G+ +
Sbjct: 2   SISITLHRSGTSRTQQVDTTTTGLDLFGS-----DRAVVAMRVDGNLVDLQRELHDGAEV 56

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           E +       L +IRHS  H+MA+AVQ ++PEV + IGP I DGFYYDF   +P + + L
Sbjct: 57  EPVEATSEDGLNIIRHSATHVMAQAVQQLYPEVNLGIGPFITDGFYYDFGNIEPVTPEVL 116

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK----------- 168
           +++EK+M+ I+  +  F+++  + E ARE  E   + YK+E++ +               
Sbjct: 117 SELEKRMKRIVKENQRFVRRVTTEESARE--ELADQPYKLELIGTKGKGAEGASVEVGGG 174

Query: 169 -----ENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
                +NV    +  W DLCRGPHV ST  +   F L K + AYW+GD     L RIYGT
Sbjct: 175 ELTIYDNVRRNGEVAWKDLCRGPHVPSTKYLANAFALTKFSAAYWKGDQANDQLQRIYGT 234

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISY 282
           AW ++++L  Y   ++E+E+RDHRKL  E+DLF   E+ G G++ +H KG  +   +  +
Sbjct: 235 AWASREDLAAYQQRIKEAERRDHRKLGAELDLFSFPEEIGPGLVVFHPKGAMLRHLIEEH 294

Query: 283 -MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD-------LRTF 334
            + R ++  +  ++TP++    L+  SGH   Y   MF     D+   +        + +
Sbjct: 295 VIARHMEAGFNFVHTPEITKGGLFHTSGHLPYYAGTMFPPMLVDEERDEEGNVTRAGQEY 354

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
            LK MNCP H  +F    +SYRELP+R  E G  YR E SG +HGL R+RGF QDD+H +
Sbjct: 355 YLKAMNCPMHNLIFRSRGRSYRELPLRFFEMGHDYRYEKSGVVHGLTRMRGFAQDDSHTY 414

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP------EKRVGSDALWDDAENIM 448
           CT+EQ   E  K     +SI  DFG     ++LSTR       EK +GSD  W  A + +
Sbjct: 415 CTREQAPGEIKKQIEFFLSILADFGLNDFYLELSTRESDSAKEEKFIGSDEDWQVATDTL 474

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
             V  +        +      G  AFYGPK    ++DAIGR WQ  TIQ DFN P RF+ 
Sbjct: 475 DQVCRSTG------LQLVPDPGGAAFYGPKVSVQVRDAIGRTWQMSTIQYDFNQPERFDL 528

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYA 568
            Y  +      P+M+H A  GS+ERFIG++ E++ G  P+WLSP+Q  +  +  +  +Y 
Sbjct: 529 EYAAADGTHQRPIMLHSAKLGSVERFIGVLTEHYAGAFPVWLSPVQVRLVPVAEAFNDYV 588

Query: 569 QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
              A +L SH + +ETD  ++    KIR  S  K+P I+I G ++A   ++  R    + 
Sbjct: 589 TGFAEVLGSHGIRVETDLSSDRFGKKIRNASKDKVPFILIAGGEDAEAGAVSFRLRDGSQ 648

Query: 629 TQKVSLLDAIPILT 642
              V L +A+ I+T
Sbjct: 649 INGVVLDEAVRIIT 662


>gi|327288851|ref|XP_003229138.1| PREDICTED: threonyl-tRNA synthetase, cytoplasmic-like [Anolis
           carolinensis]
          Length = 706

 Score =  540 bits (1390), Expect = e-151,   Method: Composition-based stats.
 Identities = 231/647 (35%), Positives = 339/647 (52%), Gaps = 50/647 (7%)

Query: 4   DIKLTFPDGSIKNFPVH-ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
            I+++ PDG          T   VA  IS+S AK AVA  +NG + DL  P+  + S+E 
Sbjct: 86  PIRISLPDGETLEGEARRTTPYQVALRISQSRAKGAVAARVNGTLHDLDRPLEEDASLEF 145

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF--DKEQPFSSDEL 119
           +  +     A+  HS AHI+  A +  +    +  GP  E GF+YD   D E+  S  +L
Sbjct: 146 VDFDARDGQALFWHSSAHILGGAAERFY-GALLCHGPSTEHGFFYDMYMDGERTVSGKDL 204

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             +++  Q+II    PF +  +S E   +LF+     +K+ I+          +YR G  
Sbjct: 205 PALQEICQDIIEEQCPFERLEVSREDLMQLFK--HNKFKLRIISEKVRTPTAIVYRCGTS 262

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHVR TG+++   KL+K A AYW+GD ++  L RIYG ++ +  +LT++    E
Sbjct: 263 IDLCRGPHVRHTGEIR-ALKLLKNASAYWKGDPSQETLQRIYGISFPSSAQLTEWERTQE 321

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           E+ +RDHR++ +E +LF   E   G  F+  KG  I+ TL+ +++ +  K  + E+ TP 
Sbjct: 322 EAARRDHRRIGKEQELFFFHELSPGSCFFLPKGAHIYTTLVDFIKSEYLKRGFSEVITPN 381

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           + +  LW+ SGHW  Y  NMF+ +   +T      FALKPMNCPGH  +F H  +S+REL
Sbjct: 382 IFNSKLWETSGHWQHYEENMFSFRLEGET------FALKPMNCPGHCLMFGHRPRSWREL 435

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLA+FG ++RNEPSG+L GL RVR F QDDAH+FC  +Q+  E     + + ++Y  F
Sbjct: 436 PLRLADFGVLHRNEPSGALSGLTRVRRFQQDDAHIFCAMDQLEGEIRSCLDFLQAVYSVF 495

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF  +   LSTRPEK +G   LWD AE                                 
Sbjct: 496 GFT-LRFYLSTRPEKFLGEIHLWDQAEL-------------------------------- 522

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIGI 537
            +  +KDA+GR  QC TIQ+DF +P RF+  Y +        PVMIHRAV GS+ER + +
Sbjct: 523 VDIQIKDALGRFHQCATIQLDFQMPIRFDLSYTSKEGATPERPVMIHRAVLGSVERMMAV 582

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIR 596
           + EN+ G  P WLSP Q +V  +   A  YA EI         + + D     T+N KIR
Sbjct: 583 LAENYGGKWPFWLSPSQIMVIPVGPDAESYAHEIHQTFHQAGFTTDVDLDPGTTLNRKIR 642

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              + +     + G KE S R++ +R        +      +  L +
Sbjct: 643 NAQLAQYNFQFVVGRKEMSNRTLNVRSRDGHRHGERDFNAVLDRLKE 689


>gi|147669325|ref|YP_001214143.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Dehalococcoides
           sp. BAV1]
 gi|189083604|sp|A5FRB3|SYT_DEHSB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|146270273|gb|ABQ17265.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Dehalococcoides
           sp. BAV1]
          Length = 582

 Score =  539 bits (1389), Expect = e-151,   Method: Composition-based stats.
 Identities = 246/574 (42%), Positives = 356/574 (62%), Gaps = 18/574 (3%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           L ++RHS AHIMAEAV S++PE ++ IGP I+ GFYYDFD  +  + ++L +IE +M ++
Sbjct: 14  LEIMRHSAAHIMAEAVLSMFPEAKLGIGPAIDTGFYYDFDLPRTLTPEDLPEIETRMNQL 73

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
           +  + PF ++ +S ++AR+L     + YK+E+L  I   E V++YRQG + DLCRGPHV 
Sbjct: 74  VKSNLPFRREEMSKDEARKL--FANQPYKLELLNDIT-DETVSIYRQGNFCDLCRGPHVN 130

Query: 190 STGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKL 249
            T +VK F KL+ +AGAYWRGD  RPML RIYG A+  +  L +YL  LEE+ KRDHRKL
Sbjct: 131 YTSKVKAF-KLLSIAGAYWRGDEKRPMLQRIYGAAFLDKASLAEYLNMLEEAAKRDHRKL 189

Query: 250 AREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQ 307
            +E++LF + ++ G G++ W   G  +   +  + +   +K  Y+ + TP +    LW+ 
Sbjct: 190 GKELELFSLHQEIGGGLVNWLPNGAIVRHLIEEFWKKEHLKRGYDLVYTPHIAKVDLWKT 249

Query: 308 SGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGS 367
           SGHW  YR NM++         D   + LKPMNC  H+ +F +  +SY+ELP+R+AE G+
Sbjct: 250 SGHWGFYRENMYSPMDI-----DGEEYVLKPMNCVYHILMFKNRTRSYKELPIRMAELGT 304

Query: 368 VYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKL 427
           VYR E SG LHGL RVRGFTQDDAH+FC  +Q+  E +K+ +L   +   FGF K  V L
Sbjct: 305 VYRYERSGVLHGLSRVRGFTQDDAHIFCLYDQLEKEVVKVLDLAKFMIDTFGFTKYKVML 364

Query: 428 STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAI 487
           STRPEK VG    W+ A +I+   L+       ++I   V  GEG FYGPK +   +DA+
Sbjct: 365 STRPEKYVGELDKWEYATDILAKALEA------NQIPYQVDPGEGVFYGPKIDIKFEDAL 418

Query: 488 GRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           GR WQ  TIQVDF LP RF+   V    +     M+HR V GS+ERF+  + E + G  P
Sbjct: 419 GRAWQGPTIQVDFQLPERFDVSVVGEDGKDQPVAMVHRTVLGSMERFMSCLTEQYGGAFP 478

Query: 548 LWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIII 607
            WLSP QA+V  I     E+A+++A  L+   + +E D R+ET+N KIR+  + KIP ++
Sbjct: 479 AWLSPKQAMVIPIADRHTEFAEKLACELREEEVRVEVDSRSETMNQKIRQAQLAKIPYML 538

Query: 608 ICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           + GDKE   +S+ +R   + + Q +   +   +L
Sbjct: 539 VVGDKEIETQSVAVRTR-TGSQQVMPFAEFKSML 571


>gi|261203861|ref|XP_002629144.1| threonyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
 gi|239586929|gb|EEQ69572.1| threonyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
          Length = 747

 Score =  539 bits (1389), Expect = e-151,   Method: Composition-based stats.
 Identities = 230/696 (33%), Positives = 363/696 (52%), Gaps = 70/696 (10%)

Query: 4   DIKLTFPDG-----SIKNFPVHATGSDVAESISRSLAKKAVAVAING-KVCDLSDPVR-E 56
           DI +T   G     ++       T       I + ++   V   ++G ++ DL  P+  +
Sbjct: 62  DITVTIDIGDSNPSTVIGKAWETTPGSFLRDIPKEISSTVVIAKLDGKELWDLDRPLERD 121

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE--QPF 114
             +  +  +      V  HS AH++ EA +  +    ++ GP    GF+YD   E     
Sbjct: 122 CRVTFLPFDSVEGREVFWHSSAHVLGEACECHY-GCLLSHGPPTPQGFFYDMALESGHVV 180

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
              +   ++ K   I     PF +  +S E  +++F   K  YK+  + ++   E+ T+Y
Sbjct: 181 KEGDWPALDAKAARIFKEKQPFDRLEVSKEDLKKMFAYSK--YKLHYINNLVEGESSTVY 238

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
           R G   DLCRGPH++ TG++K   K+M+ + AY+ GD +   L RI G A+  ++++ ++
Sbjct: 239 RCGTLVDLCRGPHIQHTGKIKI-MKIMQNSAAYFLGDQSNDALQRIRGVAFPDKKQMQEH 297

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEE 293
           L FLEE+EKR+H ++ ++ DLF   E   G  F    G KIF  L   +R +  K  Y+E
Sbjct: 298 LKFLEEAEKRNHLRIGKDQDLFFFDEVSPGCPFLLPNGTKIFNALQKLLRSEYLKRGYQE 357

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           + +P + D  +W+QSGHW  Y+ +MF +        + RT+ALKPMNCPGH  +F H  +
Sbjct: 358 VQSPNMYDVGIWRQSGHWQHYKDDMFKL------DIEKRTWALKPMNCPGHAIMFGHKER 411

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYRELP+R+A+FG ++RNE SG+LHGL RVR F QDD H+FCT++Q+  E   + + + +
Sbjct: 412 SYRELPIRMADFGVLHRNEASGALHGLTRVRKFQQDDTHIFCTEDQIMKEIDGLFDFLRA 471

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           IY  FGF    +KLSTRPEK +G    W+ AE+ ++  L   K +     +  V  G+GA
Sbjct: 472 IYGLFGF-SFKLKLSTRPEKYMGKIETWNYAEDQLRAALTKFKGN-----DWEVEEGDGA 525

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS------------------ 515
           FYGPK +  ++DA+ R++QC TIQ+D+ +P  F   Y+   +                  
Sbjct: 526 FYGPKIDITIQDALKREFQCATIQLDYQMPVNFKLEYMTGETGAKAKPTEKPAENPDEKP 585

Query: 516 -------------------EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI 556
                               +  PV+IHRA+ GS ERF GI+IE+F G  P WLSP Q +
Sbjct: 586 AGDAAKPDAPPTNSDEPGPGRARPVVIHRAIIGSFERFFGIIIEHFGGKWPFWLSPRQIL 645

Query: 557 VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASE 616
           +  +  +  +Y +E+  +LK   L+++ D    T+  KIR   I +   I + G +E S 
Sbjct: 646 IVPVMPAINDYVEELQQILKGDKLNVDIDISGNTMQKKIRTGQIAQYNFIFVVGAQEKST 705

Query: 617 RSIGIRRFGSTTTQK----VSLLDA---IPILTKES 645
           R++ IR     ++Q     V L +A   +  L KE 
Sbjct: 706 RTVNIRNRDDPSSQAKGSLVPLEEARVKLRALRKER 741


>gi|239608840|gb|EEQ85827.1| threonyl-tRNA synthetase [Ajellomyces dermatitidis ER-3]
          Length = 747

 Score =  539 bits (1389), Expect = e-151,   Method: Composition-based stats.
 Identities = 230/696 (33%), Positives = 363/696 (52%), Gaps = 70/696 (10%)

Query: 4   DIKLTFPDG-----SIKNFPVHATGSDVAESISRSLAKKAVAVAING-KVCDLSDPVR-E 56
           DI +T   G     ++       T       I + ++   V   ++G ++ DL  P+  +
Sbjct: 62  DITVTIDIGDSNPSTVIGKAWETTPGSFLRDIPKEISSTVVIAKLDGKELWDLDRPLERD 121

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE--QPF 114
             +  +  +      V  HS AH++ EA +  +    ++ GP    GF+YD   E     
Sbjct: 122 CRVTFLPFDSVEGREVFWHSSAHVLGEACECHY-GCLLSHGPPTPQGFFYDMALESGHVV 180

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
              +   ++ K   I     PF +  +S E  +++F   K  YK+  + ++   E+ T+Y
Sbjct: 181 KEGDWPALDAKAARIFKEKQPFDRLEVSKEDLKKMFAYSK--YKLHYINNLVEGESSTVY 238

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
           R G   DLCRGPH++ TG++K   K+M+ + AY+ GD +   L RI G A+  ++++ ++
Sbjct: 239 RCGTLVDLCRGPHIQHTGKIKI-MKIMQNSAAYFLGDQSNDALQRIRGVAFPDKKQMQEH 297

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEE 293
           L FLEE+EKR+H ++ ++ DLF   E   G  F    G KIF  L   +R +  K  Y+E
Sbjct: 298 LKFLEEAEKRNHLRIGKDQDLFFFDEVSPGCPFLLPNGTKIFNALQKLLRSEYLKRGYQE 357

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           + +P + D  +W+QSGHW  Y+ +MF +        + RT+ALKPMNCPGH  +F H  +
Sbjct: 358 VQSPNMYDVGIWRQSGHWQHYKDDMFKL------DIEKRTWALKPMNCPGHAIMFGHKER 411

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYRELP+R+A+FG ++RNE SG+LHGL RVR F QDD H+FCT++Q+  E   + + + +
Sbjct: 412 SYRELPIRMADFGVLHRNEASGALHGLTRVRKFQQDDTHIFCTEDQIMKEIDGLFDFLRA 471

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           IY  FGF    +KLSTRPEK +G    W+ AE+ ++  L   K +     +  V  G+GA
Sbjct: 472 IYGLFGF-SFKLKLSTRPEKYMGKIETWNYAEDQLRAALTKFKGN-----DWEVEEGDGA 525

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS------------------ 515
           FYGPK +  ++DA+ R++QC TIQ+D+ +P  F   Y+   +                  
Sbjct: 526 FYGPKIDITIQDALKREFQCATIQLDYQMPVNFKLEYMTGETGAKAKPTEKPAENPDEKP 585

Query: 516 -------------------EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI 556
                               +  PV+IHRA+ GS ERF GI+IE+F G  P WLSP Q +
Sbjct: 586 AGDAAKPDAPPTNSDEPGPGRARPVVIHRAIIGSFERFFGIIIEHFGGKWPFWLSPRQIL 645

Query: 557 VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASE 616
           +  +  +  +Y +E+  +LK   L+++ D    T+  KIR   I +   I + G +E S 
Sbjct: 646 IVPVMPAINDYVEELQQILKGDKLNVDIDISGNTMQKKIRTGQIAQYNFIFVVGAQEKST 705

Query: 617 RSIGIRRFGSTTTQK----VSLLDA---IPILTKES 645
           R++ IR     ++Q     V L +A   +  L KE 
Sbjct: 706 RTVNIRNRDDPSSQAKGSLVPLEEARVKLRALRKER 741


>gi|99035129|ref|ZP_01314912.1| hypothetical protein Wendoof_01000242 [Wolbachia endosymbiont of
           Drosophila willistoni TSC#14030-0811.24]
          Length = 536

 Score =  539 bits (1388), Expect = e-151,   Method: Composition-based stats.
 Identities = 276/543 (50%), Positives = 379/543 (69%), Gaps = 13/543 (2%)

Query: 102 DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEI 161
           DGFYYDF  ++ F++D+L  IEKKM+EI+  +  F+++  + +++ + F    E YKV+I
Sbjct: 1   DGFYYDFATDRTFTTDDLTAIEKKMKEIVKSNHRFVREVWTRKQSVDFFSGIGEKYKVDI 60

Query: 162 LESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIY 221
           + SIP  EN+T+YRQG++ DLCRGPH  STG+VK F KLMKVAGAYWRGDS  PML RIY
Sbjct: 61  ISSIPEGENLTVYRQGDFVDLCRGPHSPSTGRVKAF-KLMKVAGAYWRGDSKGPMLQRIY 119

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLIS 281
           GTAW  + EL  YL  L+E+EKRDHRK+A++MDLFHI E+  G +FWH +G+ ++  L S
Sbjct: 120 GTAWGNKDELNAYLECLKEAEKRDHRKIAKDMDLFHIQEEAVGQVFWHEQGYILYNVLES 179

Query: 282 YMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
           Y+R+K+  + Y E+ TP ++ + LW++SGHWD +R NMF V        + +  A+KPMN
Sbjct: 180 YIRKKLINNGYFEVKTPILVSKELWERSGHWDKFRENMFIV-----DESENKKLAIKPMN 234

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
           CP HV +FN   +SYR+LP+R+AEFG+ +RNE SGSLHGLMRVRGFTQDDAH+FC +EQ+
Sbjct: 235 CPCHVQIFNSHTRSYRDLPIRMAEFGTCHRNESSGSLHGLMRVRGFTQDDAHIFCMEEQV 294

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQ 460
            +E +K  +L+  +Y + GF +I VK S RP+ R G+D +WD AE  +   +        
Sbjct: 295 NSETIKFCDLLKEVYSELGFNEISVKFSDRPDIRAGNDEVWDRAEKALLEAVKEAG---- 350

Query: 461 DRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHP 520
             ++  +  GEGAFYGPK E++LKDAIGR+WQCGT+QVDF LP R  AFY+ +   K HP
Sbjct: 351 --LSYKLNPGEGAFYGPKLEFVLKDAIGRNWQCGTLQVDFILPERLGAFYIGADGHKHHP 408

Query: 521 VMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHL 580
           VM+HRA+ G+ ERFIGI+IEN+ G  P+WL+P Q  + TIT+ A  YA EI+N+LK   +
Sbjct: 409 VMLHRAILGTFERFIGILIENYAGKFPVWLAPTQLAILTITNEADGYATEISNILKEQGV 468

Query: 581 SIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
            ++TD  NE I+YKIR HS  K+PI+ I G  E + +++ +R  GS   +  SL  A   
Sbjct: 469 RVKTDLTNEKISYKIRLHSSNKVPILWIVGKNEVTSKTVSVRNLGSERQESFSLEKANES 528

Query: 641 LTK 643
           L K
Sbjct: 529 LLK 531


>gi|227503501|ref|ZP_03933550.1| threonyl-tRNA synthetase [Corynebacterium accolens ATCC 49725]
 gi|227076004|gb|EEI13967.1| threonyl-tRNA synthetase [Corynebacterium accolens ATCC 49725]
          Length = 687

 Score =  539 bits (1388), Expect = e-151,   Method: Composition-based stats.
 Identities = 229/639 (35%), Positives = 354/639 (55%), Gaps = 39/639 (6%)

Query: 35  AKKAVAVA-INGKVCDLS-DPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEV 92
            +  V V  ++G + DLS  P  E +   +   +    AVIRHSCAH+MA+AVQ+ +P  
Sbjct: 37  PEAVVVVRGVDGTLYDLSHTPDEESTFVPVAACEEDGRAVIRHSCAHVMAQAVQAEFPGT 96

Query: 93  QVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFES 152
           ++ IGP IE+GFY+DF   +PF+ ++L  +EK+M++II     F +   +   A      
Sbjct: 97  KLGIGPSIENGFYFDFQTAEPFTPEDLKNLEKRMKKIIKGGQRFERHTYA-STAEAEQAL 155

Query: 153 KKEAYKVEILESI----PAKENVTLYRQGE---------------WFDLCRGPHVRSTGQ 193
           + E +K+E+++      P  +       G+               WFDLCRGPHV +T  
Sbjct: 156 QDEPFKLELIQDKGNVDPDSDEAAEVGAGDLTHYDNVNPRTNEVEWFDLCRGPHVPTTKY 215

Query: 194 VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREM 253
           +  F        AYWRGD     L RIYGTA+ ++  L  Y   +EE+EKRDHR+L +E+
Sbjct: 216 IPAFALTRSS-AAYWRGDQANAGLQRIYGTAFESKDALAAYQTMVEEAEKRDHRRLGQEL 274

Query: 254 DLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHW 311
           DLF   ++ GSG   +H  G  +   + ++ R R ++  Y  +NTP +    L+++SGH 
Sbjct: 275 DLFSFPDEIGSGFPVFHPNGATVRMEMENHSRNRHVQAGYSFVNTPHITKGDLFRKSGHL 334

Query: 312 DSYRANMFAVKCAD-------DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           D Y   MF     D       +T+K+ + +  KPMNCP H  +F    +SYRELP+RL E
Sbjct: 335 DFYSDGMFPPMQLDGEYDAEGNTVKEPQDYYAKPMNCPMHNLIFASRGRSYRELPLRLFE 394

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FG+VYR E SG +HGL R RGFTQDDAH++CT+EQ+  E  ++ + IIS+ +D+G     
Sbjct: 395 FGTVYRYEKSGVVHGLTRARGFTQDDAHIYCTEEQLEEELTQVLDFIISLLEDYGLSDFY 454

Query: 425 VKLSTRPEK-RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           ++LST+     VGSD +W+ +  I++ V +      +  +         AFYGPK     
Sbjct: 455 LELSTKDPNKFVGSDEIWERSTAILQSVAE------KSGLELVPDPEGAAFYGPKISVQA 508

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +DAIGR WQ  T+Q+DFNLP RF   Y  S   K  P+MIHRA+FGSIERF G+++E++ 
Sbjct: 509 RDAIGRTWQMSTVQLDFNLPERFELEYTASDGTKKRPIMIHRALFGSIERFFGVLLEHYA 568

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P Q +   +    V + + +A  L+   +  + D  ++ +  KIR H+  K+
Sbjct: 569 GAFPAWLAPHQVMGIPVADDFVPHLEGVAAKLRRKGIRADVDTSDDRMQKKIRNHTTGKV 628

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           P +++ G ++    ++  R    T    V + +A+ +++
Sbjct: 629 PFMLVAGARDVEAGAVSFRFLDGTQVNGVPVDEAVELIS 667


>gi|303278011|ref|XP_003058299.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226460956|gb|EEH58250.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 698

 Score =  539 bits (1388), Expect = e-151,   Method: Composition-based stats.
 Identities = 244/593 (41%), Positives = 359/593 (60%), Gaps = 23/593 (3%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           I+++T ++   L  IRH+ AHI A A Q ++P+ +  IGP I+ GFYYDFD +  FS  +
Sbjct: 108 IKLMTSDESEELLKIRHTAAHICAMATQKLFPDAKCTIGPWIDRGFYYDFDYKPGFSEQD 167

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L +I+K+M +II +D P  ++ +S E+A    +   E YK+EIL++I   E +T+Y  GE
Sbjct: 168 LKKIKKQMIKIINKDYPLRREEVSREEATRRIKELNEPYKLEILDAIK-TEPITIYHIGE 226

Query: 179 ------WFDLCRGPHVRSTGQVKK-FFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQEL 231
                 W+DLC GPHV ST ++      L  VAGAYWRGD  +PML RIYGTAW + +EL
Sbjct: 227 EGDENAWWDLCAGPHVESTKKIHPKAIDLEAVAGAYWRGDETKPMLQRIYGTAWGSPEEL 286

Query: 232 TQYLYFLEESEKRDHRKLAREMDLFHIAED--GSGVIFWHRKGWKIFQTLISYMRR-KIK 288
             Y  F  E+ +RDHRK+ +E++LF I ++  G G++FWH KG  +   + ++ +   + 
Sbjct: 287 VAYNEFKAEAARRDHRKIGKELNLFSIQQEEVGGGLVFWHPKGALMRNIIENFWKDIHMA 346

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
             Y+ + TP V    LW+ SGH D Y  NM+     +D      T+ LKPMNCP HVAV+
Sbjct: 347 RGYDLLYTPHVGKLDLWKTSGHADFYAENMYKPMDVED-----ETYQLKPMNCPFHVAVY 401

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
             G  SYR+LP+R AE G+VYR E SG++HGL RVRGFTQDDAH+FC  +Q+ +E   + 
Sbjct: 402 KDGYFSYRDLPIRWAEMGTVYRYERSGTMHGLFRVRGFTQDDAHIFCLPDQIADEIKGVL 461

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
           +L   I   FGF +  V LST+PEK VG   +WD AE  +K  L      +    +  V 
Sbjct: 462 DLTEDILSTFGFTEFEVNLSTKPEKSVGGPEIWDKAEGALKEAL------AVKGWDYEVD 515

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
            G GAFYGPK +  + DAIGR WQC T+Q+DFNLP RF   Y++  + K  P+MIHRA+F
Sbjct: 516 EGGGAFYGPKIDIKILDAIGRKWQCSTVQLDFNLPERFELTYIDEENSKRRPIMIHRAIF 575

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRN 588
           GS+ERF GI+ EN+ G  PLW++P Q  +  +T +   Y +E    +K+  + ++     
Sbjct: 576 GSLERFYGILTENYAGAFPLWIAPTQVRLLPVTDAVTPYVEETVARMKAAGVRVDV-TSK 634

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           E +   +R    +K+P++ + G++EA + ++ +R +       +++ + I  L
Sbjct: 635 ERLAKLVRNAEKQKVPVMCVVGEQEAKDGTLAVRTYADGDVGVITVDEVIARL 687


>gi|300741607|ref|ZP_07071628.1| threonine--tRNA ligase [Rothia dentocariosa M567]
 gi|300380792|gb|EFJ77354.1| threonine--tRNA ligase [Rothia dentocariosa M567]
          Length = 677

 Score =  539 bits (1388), Expect = e-151,   Method: Composition-based stats.
 Identities = 251/676 (37%), Positives = 375/676 (55%), Gaps = 54/676 (7%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SI 59
           + + IK+     S+       T +  AE  + ++  K V   +NG + DLS  + EG ++
Sbjct: 6   LSAPIKI-----SVSGEEREVTAATAAELFADNV--KIVVARVNGTLVDLSHKLSEGDTV 58

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           E +  ++P  L V+RHS AH+MA+AVQ    + ++ IGP I DGFY+DFD  +PF+ ++L
Sbjct: 59  EPVFIDEPDGLNVLRHSAAHVMAQAVQEYRKDAKLGIGPYITDGFYFDFDVAEPFTPEDL 118

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE---------------- 163
            +IEK M +II     F ++ ++H +A E  E K E YK+E+L                 
Sbjct: 119 KKIEKSMIKIIKSGQLFRRRVVTHAEAVE--EMKNEPYKLELLSLSQGPGSGADAAEGAS 176

Query: 164 -SIPAKENVTLY-----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRP 215
             + A E +T+Y     + GE  W DLCRGPH+ +T  +   + LM+  GAYWRG    P
Sbjct: 177 VEVGAGE-ITIYDNVHPKTGEVLWNDLCRGPHLPNTKLIANGYALMRAGGAYWRGSEKNP 235

Query: 216 MLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWK 274
           ML RIYGTAW T+ EL +Y + + E+E+RDHR+L +E+DLF   ++ G G+   H KG  
Sbjct: 236 MLQRIYGTAWPTKDELVEYKHRIAEAERRDHRRLGKELDLFSFPKNIGPGLPVIHPKGGV 295

Query: 275 IFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           I + +  Y+R R I + ++ ++TP +  + L+  SGH   Y   MF     D+       
Sbjct: 296 IKREMEDYVRARHIAEGFQYVSTPHISKEDLFYTSGHLPYYADGMFPAMELDNG-----N 350

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
           + LK MNCP H  ++    +SYRELP+R  EFG+VYR+E SG L GL RVR  TQDD+H 
Sbjct: 351 YRLKAMNCPMHNEIYRSRGRSYRELPLRFFEFGTVYRDEKSGVLQGLTRVRMITQDDSHS 410

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP------EKRVGSDALWDDAENI 447
           + TKEQ  +E   + N ++S+ +DFG     ++LSTR       +K +G+D  W+ A  +
Sbjct: 411 YVTKEQAPDEVRHLLNFMLSLLEDFGMTDFYLELSTRDTEGDKKDKFIGTDEQWEQATAV 470

Query: 448 MKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFN 507
           ++ V           +      G  AFYGPK     KDAIGR WQ  T+Q DFN PSRF 
Sbjct: 471 LEQVAKETG------LELVPDPGGAAFYGPKISVQAKDAIGRTWQMSTVQYDFNQPSRFG 524

Query: 508 AFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEY 567
             Y  +      PVMIH A FGSIERF+G++ E++ G  P WLSP+Q I   +  +  +Y
Sbjct: 525 LEYQAADGSIQEPVMIHSAKFGSIERFLGVLTEHYAGAFPAWLSPVQVICVPVAEAFNDY 584

Query: 568 AQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGST 627
             EIA+ L+   + +E D+ ++    KIR  S +K+P I+I G ++A   ++  R  G+ 
Sbjct: 585 MTEIADKLREQGVRVEVDYGSDRFTKKIRTASTEKVPFILIAGGEDAEAGAVSFRFRGNK 644

Query: 628 TTQKVSLLDAIPILTK 643
               V + +A+  +  
Sbjct: 645 QENGVPVDEAVVRIVN 660


>gi|314923371|gb|EFS87202.1| threonyl-tRNA synthetase [Propionibacterium acnes HL001PA1]
 gi|315093365|gb|EFT65341.1| threonyl-tRNA synthetase [Propionibacterium acnes HL060PA1]
 gi|315103379|gb|EFT75355.1| threonyl-tRNA synthetase [Propionibacterium acnes HL050PA2]
 gi|327327544|gb|EGE69320.1| threonine--tRNA ligase [Propionibacterium acnes HL103PA1]
          Length = 689

 Score =  538 bits (1387), Expect = e-151,   Method: Composition-based stats.
 Identities = 236/674 (35%), Positives = 357/674 (52%), Gaps = 48/674 (7%)

Query: 4   DIKLTFPD-GSIK--NFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
            I +T    G+ +        TG D+  S      +  VA+ ++G + DL   + +G+ +
Sbjct: 7   SISITLHRSGTSRTQQVDTTTTGLDLFGS-----DRAVVAMRVDGNLVDLQRELHDGAEV 61

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           E +       L +IRHS  H+MA+AVQ ++PEV + IGP I DGFYYDF   +P + + L
Sbjct: 62  EPVEATSEDGLNIIRHSATHVMAQAVQQLYPEVNLGIGPFITDGFYYDFGNIEPVTPEVL 121

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK----------- 168
           +++EK+M+ I+  +  F+++  + E ARE  E   + YK+E++ +               
Sbjct: 122 SELEKRMKRIVKENQRFVRRVTTEESARE--ELADQPYKLELIGTKGKGAEGASVEVGGG 179

Query: 169 -----ENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
                +NV    +  W DLCRGPHV ST  +   F L K + AYW+GD     L RIYGT
Sbjct: 180 ELTIYDNVRRNGEVAWKDLCRGPHVPSTKYLANAFALTKFSAAYWKGDQANDQLQRIYGT 239

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISY 282
           AW ++++L  Y   ++E+E+RDHRKL  E+DLF   E+ G G++ +H KG  +   +  +
Sbjct: 240 AWASREDLAAYQQRIKEAERRDHRKLGAELDLFSFPEEIGPGLVVFHPKGAMLRHLIEEH 299

Query: 283 -MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD-------LRTF 334
            + R ++  +  ++TP++    L+  SGH   Y   MF     D+   +        + +
Sbjct: 300 VIARHMEAGFNFVHTPEITKGGLFHTSGHLPYYAGTMFPPMLVDEERDEEGNVTRAGQEY 359

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
            LK MNCP H  +F    +SYRELP+R  E G  YR E SG +HGL R+RGF QDD+H +
Sbjct: 360 YLKAMNCPMHNLIFRSRGRSYRELPLRFFEMGHDYRYEKSGVVHGLTRMRGFAQDDSHTY 419

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP------EKRVGSDALWDDAENIM 448
           CT+EQ   E  K     +SI  DFG     ++LSTR       EK +GSD  W  A + +
Sbjct: 420 CTREQAPGEIKKQIEFFLSILADFGLNDFYLELSTRESDSAKEEKFIGSDEDWQVATDTL 479

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
             V  +        +      G  AFYGPK    ++DAIGR WQ  TIQ DFN P RF+ 
Sbjct: 480 DQVCRSTG------LQLVPDPGGAAFYGPKVSVQVRDAIGRTWQMSTIQYDFNQPERFDL 533

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYA 568
            Y  +      P+M+H A  GS+ERFIG++ E++ G  P+WLSP+Q  +  +  +  +Y 
Sbjct: 534 EYAAADGTHQRPIMLHSAKLGSVERFIGVLTEHYAGAFPVWLSPVQVRLVPVAEAFNDYV 593

Query: 569 QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
              A +L S  + +ETD  ++    KIR  S  K+P I+I G ++A   ++  R    + 
Sbjct: 594 TGFAEVLGSRGIRVETDLSSDRFGKKIRNASKDKVPFILIAGGEDAEAGAVSFRLRDGSQ 653

Query: 629 TQKVSLLDAIPILT 642
              V L +A+ I+T
Sbjct: 654 INGVVLDEAVRIIT 667


>gi|154174749|ref|YP_001407384.1| threonyl-tRNA synthetase [Campylobacter curvus 525.92]
 gi|171769252|sp|A7GVZ2|SYT_CAMC5 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|112802358|gb|EAT99702.1| threonyl-tRNA synthetase [Campylobacter curvus 525.92]
          Length = 606

 Score =  538 bits (1387), Expect = e-151,   Method: Composition-based stats.
 Identities = 250/617 (40%), Positives = 382/617 (61%), Gaps = 25/617 (4%)

Query: 37  KAVAVAINGKVCDLSDPV-REGSIEIITPE-DPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           + +A  +NG++ D      RE   + +  +  P +L VIRHSCAH+MA+A++S++P  + 
Sbjct: 3   EIIAYKLNGELIDTQSINGREAVAQPVYFDNSPDALHVIRHSCAHLMAQAIKSLYPNAKF 62

Query: 95  AIGPIIEDGFYYDFDKEQPFS---SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFE 151
            +GP +EDGFYYDF  ++  +     +L  IEKKM+E+        K   +   A    +
Sbjct: 63  FVGPNVEDGFYYDFRVDEAGTKLGESDLEAIEKKMKELAEAKFEITKICSTK--AAMSEK 120

Query: 152 SKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGD 211
            K +  K E+L+ IP  E V+ Y QG++ DLCRGPHV +T  ++ FFKL +VAGAY  GD
Sbjct: 121 FKNDDLKQEVLKRIPEGE-VSSYAQGDFEDLCRGPHVPNTKFLR-FFKLTRVAGAYLGGD 178

Query: 212 SNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHR 270
             R ML+RIYGTA+  +  L +++  +EE++KRDHRKL  EM LF   E+ G G+  W  
Sbjct: 179 ETREMLNRIYGTAYADKASLAEHIRIIEEAKKRDHRKLGVEMKLFGFDEEVGGGLPIWLP 238

Query: 271 KGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
            G ++   L   + +      YE +  P++L   +W++SGH+ +Y+ NM+       T  
Sbjct: 239 NGGRLRSKLEQILYKAHRDRGYEPVRGPELLKADVWKRSGHYANYKENMYF------TTI 292

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
           D   + +KPMNC GH+ V+   ++SYR+LP++  E+G V+R+E SG LHGL RVR F QD
Sbjct: 293 DDAEYGIKPMNCVGHIKVYQTEIRSYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFAQD 352

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMK 449
           D+H+FC   Q+    L+I +    I ++FGFE  M ++ST+P K +GSD +WD A N +K
Sbjct: 353 DSHIFCMPSQIKQNILEILSFAGKIMQNFGFEYEM-EISTKPAKAIGSDEIWDIATNALK 411

Query: 450 GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAF 509
             LD      ++    G+  G GAFYGPK +  + DA+ R WQCGTIQVDFNLP RF+  
Sbjct: 412 EALD------ENGFKYGIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDFNLPERFDLG 465

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQ 569
           Y+++++E+  PVM+HRA+ GS ERFIGI+IE+  G LP +++P Q ++  I+ + ++YA+
Sbjct: 466 YIDANNERQRPVMLHRALLGSFERFIGILIEHTAGELPFFIAPTQVVIVPISDAHLDYAK 525

Query: 570 EIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           EIA  L+  ++  E   +NE++N +IR    +++P+II+ GD E + RS+ +R   + T 
Sbjct: 526 EIARELRKFNIDSEVASKNESLNKRIRTAEKQRVPMIIVLGDNEVANRSVALRDRQARTQ 585

Query: 630 QKVSLLDAIPILTKESL 646
             +SL + +  LTKE L
Sbjct: 586 SDMSLAEFLN-LTKEKL 601


>gi|257055522|ref|YP_003133354.1| threonyl-tRNA synthetase [Saccharomonospora viridis DSM 43017]
 gi|256585394|gb|ACU96527.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase
           [Saccharomonospora viridis DSM 43017]
          Length = 692

 Score =  538 bits (1387), Expect = e-151,   Method: Composition-based stats.
 Identities = 239/663 (36%), Positives = 365/663 (55%), Gaps = 44/663 (6%)

Query: 17  FPVHAT-GSDVAESISRSLAKKAVAVAIN--GKVCDLSD-PVREGSIEIITPEDPRSLAV 72
                T G+ V E+   S   +A+ V  +  G + DL+  P     +E +        +V
Sbjct: 17  VRAGTTAGAAVREAGYPSKGAEAIVVVRDPEGTLRDLAWVPDVNVEVEPVAANSEDGRSV 76

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIAR 132
           IRHS AH++A+AVQ  +PE ++ IGP I+DGFYYDF  ++PF+ ++L  +EK+M++II  
Sbjct: 77  IRHSAAHVLAQAVQQQFPEAKLGIGPPIKDGFYYDFAVDRPFTPEDLQALEKRMKQIIKG 136

Query: 133 DSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKE---------------NVTLY--- 174
              F ++ +   +A +  E   E +K+E+++    +                 +T+Y   
Sbjct: 137 AQQFSRRVVESVEAAK-EELADEPFKLELVDLKSEQGADAVDTSEVMEVGAGELTIYDNL 195

Query: 175 ----RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQE 230
               ++  W DLCRGPHV +T  +  F KL +VA AYWRGD   P L RIYGTAW +Q+ 
Sbjct: 196 DPRTKERVWSDLCRGPHVPTTKYIPAF-KLTRVAAAYWRGDERNPQLQRIYGTAWESQEA 254

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD 289
              YL  L E+E+RDHRKL  E+DLF   E+ GSG+  +H KG  + + L  Y RR+ ++
Sbjct: 255 QDAYLEMLAEAERRDHRKLGAELDLFSFPEEIGSGLPVFHPKGGVVRKVLEDYSRRRHEE 314

Query: 290 -DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD-------LRTFALKPMNC 341
             YE +NTP +    L++ SGH   YR  M+     D    D        + + LKPMNC
Sbjct: 315 AGYEFVNTPHITKAQLFETSGHLHWYREGMYPGMHLDAEYNDDGTVRKPGQDYFLKPMNC 374

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
           P H  ++    +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDDAH++CT +QM 
Sbjct: 375 PMHNLIYRSRGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYCTVDQMH 434

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR-VGSDALWDDAENIMKGVLDTIKNSSQ 460
           +E   +   ++ + +D+G +   ++LSTR  ++ +GSD  W+ A + ++   +       
Sbjct: 435 DEIKSLLQFVLDLLRDYGLDDFYLELSTRDPEKSIGSDEDWERATDALRSAAEASG---- 490

Query: 461 DRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHP 520
             ++  +  G  AFY PK     KDAIGR WQ  TIQVD   P  F   Y  S   K  P
Sbjct: 491 --LDLVLDPGGAAFYAPKISVQAKDAIGRSWQMSTIQVDLMEPELFGLEYQASDGSKQQP 548

Query: 521 VMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHL 580
           VMIHRA+FGSIERF G++ E++ G  P WL+P+Q +   I  + VE+ + +   L+   +
Sbjct: 549 VMIHRALFGSIERFFGVLTEHYAGAFPAWLAPVQVVGIPIADAHVEHLRGVEKALRDRGI 608

Query: 581 SIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
            +E D  ++ +  KIR H+ +K+P +++ G ++    ++  R    +    V +  A+  
Sbjct: 609 RVELDTSDDRMQKKIRTHTTQKVPFLLLAGGRDVEAGAVSFRFRDGSQINGVPVATAVDA 668

Query: 641 LTK 643
           +  
Sbjct: 669 VVD 671


>gi|212715814|ref|ZP_03323942.1| hypothetical protein BIFCAT_00715 [Bifidobacterium catenulatum DSM
           16992]
 gi|212661181|gb|EEB21756.1| hypothetical protein BIFCAT_00715 [Bifidobacterium catenulatum DSM
           16992]
          Length = 677

 Score =  538 bits (1387), Expect = e-151,   Method: Composition-based stats.
 Identities = 244/670 (36%), Positives = 361/670 (53%), Gaps = 44/670 (6%)

Query: 1   MPSD-IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI 59
           M    I +   +G  K      TG  +         K  +AV +NG+  DL   + +G +
Sbjct: 1   MAEQTISIIL-NGEAKEVAADQTGVQLFAE-----DKNIIAVRLNGEPRDLYTELHDGDV 54

Query: 60  -EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
            E I  +    LA++RHS  H+MA+AVQ I P+ ++ +GP+I+DGFYYDFD E PF+ D+
Sbjct: 55  VEPIVLDSEDGLAIMRHSATHVMAQAVQEIRPDAKLGVGPVIKDGFYYDFDVETPFTPDD 114

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPA----------- 167
           L +IEK+MQ II     F ++ ++ E    L E   + YK+E+++   A           
Sbjct: 115 LKEIEKRMQRIIKSSQSFRRRVVTEE--EALAEEADQPYKLELIKDKEAHLDPEAATEIS 172

Query: 168 KENVTLYRQGE------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIY 221
            + ++ Y   +      W DLCRGPH+ +T  +K F K+ + A AYWRG    PML R+Y
Sbjct: 173 GKELSFYDNVDRDGNVVWKDLCRGPHLPNTRYIKAF-KIERSAAAYWRGSEANPMLQRVY 231

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLI 280
           G A+ T+++L  Y   LEE+ KRDHRKL  EMDLF   ++ G G+  +H KG  +   + 
Sbjct: 232 GAAFATKEDLKAYQTRLEEAAKRDHRKLGAEMDLFSFPDEIGPGLAVFHPKGAAVINAME 291

Query: 281 SYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT-------IKDLR 332
            Y R    K  Y  + TP +    L++ SGH   Y+  M+     D+        IK   
Sbjct: 292 DYSREMHRKHHYSFVQTPHITKGGLYETSGHLHWYKDGMYPAMRLDEEKDENGNVIKQGF 351

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
            + LKPMNCP H  +F    +SYRELP+RL EFG+VYR E SG +HGL RVRG TQDD+H
Sbjct: 352 DYYLKPMNCPMHNLIFKSRQRSYRELPLRLFEFGTVYRYEKSGEVHGLTRVRGLTQDDSH 411

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGV 451
           ++CT+EQM +E   +   ++ + KDFG +   ++LST+     VGSD +W++A N +  V
Sbjct: 412 IYCTREQMKDELKNLLTFVLGLLKDFGLDDFYLELSTKDPHKYVGSDEIWEEATNTLAEV 471

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
                   +  +         AFYGPK     +DAIGR WQ  TIQ+DFNLP RF   Y+
Sbjct: 472 AK------ESGLELIDDPCGAAFYGPKISVQARDAIGRTWQVSTIQLDFNLPERFGLEYI 525

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
            +      PVMIHRA+FGSIERF  +++E++ G  P WL+P+Q +   +      + Q+ 
Sbjct: 526 AADGTHQRPVMIHRALFGSIERFFAVLLEHYAGAFPAWLAPVQVLGVPVADEFAPHLQQF 585

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
              L+   +  E D  ++    KIR  S  K+P I+I G+++ +  ++  R    +    
Sbjct: 586 IASLEEETVRCEIDMSDDRFGKKIRNASKSKVPFILIVGEEDMNNNAVSFRFRDGSQLNG 645

Query: 632 VSLLDAIPIL 641
           V   +A   +
Sbjct: 646 VPTDEAKAQI 655


>gi|260434317|ref|ZP_05788287.1| threonyl-tRNA synthetase [Synechococcus sp. WH 8109]
 gi|260412191|gb|EEX05487.1| threonyl-tRNA synthetase [Synechococcus sp. WH 8109]
          Length = 611

 Score =  538 bits (1387), Expect = e-151,   Method: Composition-based stats.
 Identities = 248/584 (42%), Positives = 350/584 (59%), Gaps = 17/584 (2%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           + +    +   L  IRHS +H+MA AVQ ++P+ +V IGP  E GFYYDFD   PF+  +
Sbjct: 23  VVLPKTSESDQLLRIRHSMSHVMAMAVQQLFPKARVTIGPWTETGFYYDFDNPDPFTEAD 82

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG- 177
           L  I+K M +II +  P  +  +S  +A E  +++ E YK+EILE +  +E +T+Y  G 
Sbjct: 83  LKAIKKGMIKIINKKLPLERVEVSRNEAEEKIKAQNEPYKLEILEGL--QEPITVYTLGE 140

Query: 178 EWFDLCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           +W+DLC GPHV  TGQ+  K F+L  VAGAYWRGD  +  L RIYGTAW T ++L ++  
Sbjct: 141 DWWDLCAGPHVDHTGQLNAKAFELESVAGAYWRGDETKAQLQRIYGTAWETPEQLAEHKR 200

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEI 294
             EE+ +RDHR++ +++DLF I ++   G++FWH +G ++   +  + R+   +  YE +
Sbjct: 201 RKEEALRRDHRRIGKDLDLFSIEDEAGAGLVFWHPRGARMRLLIEEFWRQAHFEGGYELL 260

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
            TP V D  LW+ SGH D Y  +MF     D+     R + LKPMNCP HV  +   L+S
Sbjct: 261 YTPHVADISLWKTSGHLDFYAESMFGPMEVDE-----REYQLKPMNCPFHVLTYASKLRS 315

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YRELP+R AE G+VYR E  G +HGLMRVRGFTQDDAHVFC  EQ+ +E LKI +L   I
Sbjct: 316 YRELPIRWAELGTVYRYERPGVMHGLMRVRGFTQDDAHVFCLPEQISDEILKILDLTERI 375

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
              F F    + LSTRPEK +G D +WD A   +   LD      +      +  G GAF
Sbjct: 376 LSSFDFSNYEINLSTRPEKSIGDDTVWDLATKGLIEALD------RKGWAYKIDEGGGAF 429

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  ++DAIGR WQC TIQ+DFNLP RF+  YV +   K  P+MIHRA+FGS+ERF
Sbjct: 430 YGPKIDLKIEDAIGRMWQCSTIQLDFNLPERFDLDYVAADGSKQRPIMIHRAIFGSLERF 489

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
            GIM EN+ G+ P WL+P Q  +  +T     YA+++ + L    +    D   + +   
Sbjct: 490 FGIMTENYAGDYPFWLAPEQVRLLPVTDEVQPYAEQVLDQLTKAGVRATIDRSGDRLGKL 549

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           IR     KIP++ + G KEA + ++ +R          ++ D +
Sbjct: 550 IRTGEQIKIPVLAVIGAKEAEQNAVSLRSRRDGDLGVTAVADLL 593


>gi|298491630|ref|YP_003721807.1| threonyl-tRNA synthetase ['Nostoc azollae' 0708]
 gi|298233548|gb|ADI64684.1| threonyl-tRNA synthetase ['Nostoc azollae' 0708]
          Length = 606

 Score =  538 bits (1386), Expect = e-151,   Method: Composition-based stats.
 Identities = 239/586 (40%), Positives = 352/586 (60%), Gaps = 15/586 (2%)

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
            +  +L  IRH+ +HIMA AVQ ++P+VQV IGP IE+GFYYDFD  +PFS  +L  I+K
Sbjct: 19  SESETLKKIRHTASHIMAMAVQKLFPKVQVTIGPWIENGFYYDFDNPEPFSDKDLKAIQK 78

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE-WFDLC 183
           +M +II R  P +++ +S E+A++L E  KE YK+EIL  I  +E +T+Y  GE W+DLC
Sbjct: 79  EMVKIINRKLPLVREEVSREEAQKLIEGIKEPYKLEILADIK-QEPITIYHLGEEWWDLC 137

Query: 184 RGPHVRSTGQVKK-FFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
            GPHV +T  +     +L  VAGAYWRGD  +  L RIY TAW T ++L +Y     E+ 
Sbjct: 138 AGPHVENTKDINPKAIELESVAGAYWRGDETKAQLQRIYATAWETPEQLAEYKRRKAEAL 197

Query: 243 KRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVL 300
           +RDHRKL +E+ LF      G G+  W  KG  +   L  +++  ++K  Y  + TP + 
Sbjct: 198 RRDHRKLGKELGLFIFADPVGPGLPLWTPKGTLLRTILEDFLKKEQLKRGYLTVVTPHIA 257

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDL-RTFALKPMNCPGHVAVFNHGLKSYRELP 359
              L++ SGHW  Y+ ++F +   D     + + F LKPMNCP H+ ++   L+SYRELP
Sbjct: 258 RVDLFKTSGHWQKYKEDIFPLMAEDAEAAAIEQGFVLKPMNCPFHIQIYKGELRSYRELP 317

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +RLAEFG+VYR E SG L GL RVRGFT DD+H+F T EQ+ NE L + +LI+++++   
Sbjct: 318 MRLAEFGTVYRYEQSGELGGLTRVRGFTVDDSHLFVTPEQLDNEFLSVVDLILTVFRSLQ 377

Query: 420 FEKIMVKLSTRPE---KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
            +    +LS R     K +G D +WD +E  ++  +  +     + I      GE AFYG
Sbjct: 378 LKNFKARLSFRDPASDKYIGGDEVWDKSEGAIRRAVQQLGMDHFEGI------GEAAFYG 431

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK ++I  DA+ R+WQ GT+QVD+NLP RF+  YV     +  PVMIHRA FGS+ER IG
Sbjct: 432 PKLDFIFSDALDREWQLGTVQVDYNLPERFDLEYVAEDGARKRPVMIHRAPFGSLERLIG 491

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           I+IE + G+ PLWL+P+Q  +  +  + +++ +E+   + +  +  E D   E +   IR
Sbjct: 492 ILIEEYAGDFPLWLAPVQIRLLPVGEAQIDFTKEVVAKMLALGIRAEVDLSGERLGKLIR 551

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
                KIP++ + G KE    S+ IR   S     +S+   +  + 
Sbjct: 552 NAEKDKIPVMAVVGVKEVETNSLSIRTRASGELGVISVDQVVGKIQ 597


>gi|329939431|ref|ZP_08288767.1| threonyl-tRNA synthetase [Streptomyces griseoaurantiacus M045]
 gi|329301660|gb|EGG45554.1| threonyl-tRNA synthetase [Streptomyces griseoaurantiacus M045]
          Length = 666

 Score =  538 bits (1386), Expect = e-150,   Method: Composition-based stats.
 Identities = 247/644 (38%), Positives = 358/644 (55%), Gaps = 40/644 (6%)

Query: 17  FPVHATGSDV--AESISRSLAKKAVAVAIN-GKVCDLSD-PVREGSIEIITPEDPRSLAV 72
                T  +   A  +  S     V V  + G++ DL   P  +  +  +  ++P  L V
Sbjct: 15  VAAGTTAGEAVSAAGLPESGPTAIVVVRDSAGRLRDLDWVPELDTKVTPVALDEPDGLNV 74

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIAR 132
           +RHS AH++A+AVQ ++PE ++ IGP IE+GFYYDFD  +PF  D+L ++EK+MQEII +
Sbjct: 75  LRHSTAHVLAQAVQDVFPEAKLGIGPPIENGFYYDFDVAKPFQPDDLKRLEKRMQEIIKQ 134

Query: 133 DSPFLKQ-YLSHEKARELFESKKEAYKVEI--LESIPAKENVTLYRQGE----------- 178
              F ++ Y S E A++  +  KE YK+E+  L+     E V     GE           
Sbjct: 135 GQRFQRRRYDSLEDAKD--QLAKEPYKLELVDLKGEVDAEEVMEVGAGELTAYDNLDPKD 192

Query: 179 ----WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
               W DLCRGPH+ ST  +  F KLM+ A AYWRG+   P L RIYGTAW ++ EL  Y
Sbjct: 193 GHRVWGDLCRGPHLPSTRHIPAF-KLMRSAAAYWRGNERNPQLQRIYGTAWPSRDELKAY 251

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYE 292
           L  LEE+ +RDHRKL  E+DLF   ++ GSG+  +H KG  + + + +Y R +  +  Y 
Sbjct: 252 LKLLEEASRRDHRKLGAELDLFSFPDEIGSGLAVFHPKGGIVRREMENYSRVKHEEAGYS 311

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
            +N+P +    L++ SGH   Y   MF          +   + LKPMNCP H  +F    
Sbjct: 312 FVNSPHITKGKLFETSGHLPYYADTMFPPIEM-----EGADYYLKPMNCPFHNLIFKSRG 366

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
           +SYRELP+RL EFG+VYR E SG +HGL RVRG T DD+H++CT+EQM  E   +   ++
Sbjct: 367 RSYRELPLRLFEFGTVYRYEKSGVVHGLTRVRGLTMDDSHIYCTREQMAGELTSLLRFVL 426

Query: 413 SIYKDFGFEKIMVKLSTRP--EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
           ++ +D+G +   ++LSTR    K +GSD  W++A   ++        +++  +      G
Sbjct: 427 ALLRDYGLDDFYLELSTRDDSPKFIGSDEDWEEATEALRSA------AAESGLELVPDPG 480

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
             AFYGPK     KDAIGR WQ  TIQVDFN P RF   Y  ++  +  PVMIHRA+FGS
Sbjct: 481 GAAFYGPKISVQAKDAIGRTWQMSTIQVDFNQPKRFGLEYSAANGGREQPVMIHRALFGS 540

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
           IERF G++ E++ G  P WL+P+Q +   I     +Y  E    L+ H +  E D  ++ 
Sbjct: 541 IERFFGVLTEHYAGAFPAWLAPVQVVGIPIREDHADYLAEFVAKLREHGIRAEVDHSDDR 600

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           +  KIR    +KIP + I GD + +  ++  R    +    V L
Sbjct: 601 MQKKIRTAQQQKIPFMAIAGDDDVNGGTVSFRYRDGSQRNGVPL 644


>gi|315080595|gb|EFT52571.1| threonyl-tRNA synthetase [Propionibacterium acnes HL078PA1]
          Length = 689

 Score =  538 bits (1386), Expect = e-150,   Method: Composition-based stats.
 Identities = 235/674 (34%), Positives = 355/674 (52%), Gaps = 48/674 (7%)

Query: 4   DIKLTFPD-GSIK--NFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
            I +T    G+ +        TG D+  S      +  VA+ ++G + DL   + +G+ +
Sbjct: 7   SISITLHRSGTSRTQQVDTTTTGLDLFGS-----DRAVVAMRVDGNLVDLQRELHDGAEV 61

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           E +       L +IRHS  H+MA+AVQ ++PEV + IGP I DGFYYDF   +P + + L
Sbjct: 62  EPVEATSEDGLNIIRHSATHVMAQAVQQLYPEVNLGIGPFITDGFYYDFGNIEPVTPEVL 121

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK----------- 168
           +++EK+M+ I+  +  F+++  + E ARE  E   + YK+E++ +               
Sbjct: 122 SELEKRMKRIVKENQRFVRRVTTEESARE--ELADQPYKLELIGTKGKGAEGASVEVGGG 179

Query: 169 -----ENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
                +NV    +  W DLCRGPHV ST  +   F L K + AYW+GD     L RIYGT
Sbjct: 180 ELTIYDNVRRNGEVAWKDLCRGPHVPSTKYLANTFALTKFSAAYWKGDQANDQLQRIYGT 239

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISY 282
           AW +++ L  Y   ++E+E+RDHRKL  E+DLF   E+ G G++ +H KG  +   +  +
Sbjct: 240 AWASREGLAAYQQRIKEAERRDHRKLGAELDLFSFPEEIGPGLVVFHPKGAMLRHLIEEH 299

Query: 283 -MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD-------LRTF 334
            + R ++  +  ++TP++    L+  SGH   Y   MF     D+   +        + +
Sbjct: 300 VIARHMEAGFNFVHTPEITKGGLFHTSGHLPYYADTMFPPMLVDEERDEEGNVTRAGQEY 359

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
            LK MNCP H  +F    +SYRELP+R  E G  YR E SG +HGL R+RGF QDD+H +
Sbjct: 360 YLKAMNCPMHNLIFRSRGRSYRELPLRFFEIGHDYRYEKSGVVHGLTRMRGFAQDDSHTY 419

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP------EKRVGSDALWDDAENIM 448
           CT+EQ   E  K     +SI  DFG     ++LSTR       EK +GSD  W  A + +
Sbjct: 420 CTREQAPGEIKKQIEFFLSILADFGLNDFYLELSTRESDSAKKEKFIGSDEDWQVATDTL 479

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
             V  +        +      G  AFYGPK    ++DAIGR WQ  TIQ DFN P RF+ 
Sbjct: 480 DQVCRSTG------LQLVPDPGGAAFYGPKVSVQVRDAIGRTWQMSTIQYDFNQPERFDL 533

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYA 568
            Y  +      P+M+H A  GS+ERFIG++ E++ G  P+WLSP+Q  +  +  +  +Y 
Sbjct: 534 EYAAADGTHQRPIMLHSAKLGSVERFIGVLTEHYAGAFPVWLSPVQVRLVPVAEAFNDYV 593

Query: 569 QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
              A +L S  + +ETD  ++    KIR  S  K+P I+I G ++A   ++  R    + 
Sbjct: 594 TGFAEVLGSRGIRVETDLSSDRFGKKIRNASKDKVPFILIAGGEDAEAGAVSFRLRDGSQ 653

Query: 629 TQKVSLLDAIPILT 642
              V L +A+ I+ 
Sbjct: 654 VNGVVLDEAVRIIA 667


>gi|82753545|ref|XP_727721.1| threonyl-tRNA synthetase [Plasmodium yoelii yoelii str. 17XNL]
 gi|23483702|gb|EAA19286.1| threonyl-tRNA synthetase, putative [Plasmodium yoelii yoelii]
          Length = 930

 Score =  538 bits (1386), Expect = e-150,   Method: Composition-based stats.
 Identities = 231/723 (31%), Positives = 375/723 (51%), Gaps = 99/723 (13%)

Query: 3   SDIKLTFPDGSIKNFPVH-ATGSDVAESISRSLAKKAVAVA------IN----------- 44
            +I +   DGSIK    +  T   +A  IS+ L++ ++         +N           
Sbjct: 207 KEINIELLDGSIKTGQKNITTPYQIASQISKKLSENSIVAEIIYLDNVNLNLCDIEDDEN 266

Query: 45  ----------GKVCDLSDP-VREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQ 93
                     G + D++ P +    I+ +  E P+   +  HS AHI+  +++ ++    
Sbjct: 267 DETNVDQSQEGILWDMNVPLIGNCKIKFLGIETPQGKKIFWHSSAHILGSSLEKLYGG-Y 325

Query: 94  VAIGPIIEDGFYYDFD-KEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFES 152
           + IGP + +GFYYD         S+   +IE +  +++  +  F K   + E+  ELF+ 
Sbjct: 326 LTIGPALNEGFYYDIYLGNNSIISENYNKIENEYNKLVKENVEFEKMICTKEEVLELFKY 385

Query: 153 KKEAYKVEILESI--PAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRG 210
               +K+E+++S      E  ++Y+ G + DLC GPH+++TG+VK F K++K + AYW G
Sbjct: 386 --NPFKIELIKSKIKNDNEKTSVYKCGNFIDLCLGPHIKNTGKVKAF-KVLKNSSAYWLG 442

Query: 211 DSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSG-VIFWH 269
           + N   L R+YG ++  + ELT Y+ F+EE++KRDHR + + ++LF   ++ S    FW 
Sbjct: 443 NKNNDSLQRVYGISFQKKTELTDYIKFIEEAKKRDHRNVGKNLNLFFFEKETSPGSGFWF 502

Query: 270 RKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTI 328
             G KI+  LI +MR++ +   Y+E+ TP +    LW+ SGH+ +Y+  MF         
Sbjct: 503 SHGAKIYNKLIEFMRKEYRIRKYDEVITPNIFSCDLWKTSGHYQNYKNCMFIFNI----- 557

Query: 329 KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQ 388
            + + + +KPMNCPGH  +F     SY+ LP+RLA+FG ++RNE +GSL GL RVR F Q
Sbjct: 558 -ENKEWGMKPMNCPGHCLIFKQLNASYKSLPIRLADFGVLHRNEITGSLSGLTRVRRFQQ 616

Query: 389 DDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIM 448
           DDAH+FC+ + +  E + +   I  +Y  FGF+  +  LSTRP K +G    WD AE  +
Sbjct: 617 DDAHIFCSLDHIKTEVVNVLQFIFFVYNLFGFKYDL-YLSTRPPKYIGDIETWDFAEKSL 675

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
           K  L+         +   +  G+GAFYGPK + +L+D++ R  QCGT+Q+DF LP RFN 
Sbjct: 676 KEALELAN------VKWKLNEGDGAFYGPKIDIVLRDSLNRSHQCGTVQLDFQLPIRFNL 729

Query: 509 FYVNSH---------------------------------------SEKC--------HPV 521
            Y N                                         ++           P+
Sbjct: 730 QYKNKEYGVGQETDSNLVNNSNTDVIEKKEDSTLENIDNNQDPINNQPGGVLKKGFDRPI 789

Query: 522 MIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLS 581
           +IHRA+ GS+ERF+ I++E+  G  P WLSP QAIV  I+    EYA+ I  +L ++   
Sbjct: 790 IIHRAILGSVERFVAILVEHTSGKFPFWLSPRQAIVLPISDKFNEYAKYIHTVLTNNLFD 849

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV-SLLDAIPI 640
           ++ D    T+N KIRE  +K+   I++ G+KE S  ++ +R   +   QKV ++ + +  
Sbjct: 850 VDVDISVNTLNKKIREAQLKQYNFILVVGEKEISTNTVTVRDRDNPNDQKVYTVQELVNT 909

Query: 641 LTK 643
             K
Sbjct: 910 FKK 912


>gi|168012416|ref|XP_001758898.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162690035|gb|EDQ76404.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 613

 Score =  538 bits (1386), Expect = e-150,   Method: Composition-based stats.
 Identities = 252/588 (42%), Positives = 369/588 (62%), Gaps = 17/588 (2%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           I + T E    L  IRH+ AH++A AVQ ++P+ QV IGP IE GFYYDFDKE+PF+  +
Sbjct: 30  IVLPTNESSEKLLKIRHTSAHVLAMAVQKLFPDAQVTIGPWIEKGFYYDFDKEEPFTETD 89

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L +I+K+M  II+R+ P  ++ ++ E+A +  ++  E YK+EILE I   E +T+Y+ GE
Sbjct: 90  LKKIKKEMDRIISRNLPLTREEVAKEEAEKRIKAINEPYKLEILEGIK-TEPITIYKIGE 148

Query: 179 -WFDLCRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
            W+DLC GPH+  TGQ+ K+  +L  VAGAYWRGD  + ML RIYGTAW ++++L  Y  
Sbjct: 149 EWWDLCAGPHLERTGQLDKRAIELEFVAGAYWRGDEKKQMLQRIYGTAWESEEQLKAYQV 208

Query: 237 FLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEI 294
             EE+++RDHR+L ++++LF I ED G G++FWH KG  +   +  Y ++    + YE +
Sbjct: 209 QKEEAKRRDHRRLGQDLNLFSIQEDAGGGLVFWHPKGSMVRHIIEDYWKKMHFANGYELL 268

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
            TP +    LW+ SGH++ Y+ NMF     D    +   + ++PMNCP H+ V+   L+S
Sbjct: 269 YTPHIAKLDLWKTSGHYEFYKENMF-----DQMRIEEELYQIRPMNCPFHIQVYKDSLRS 323

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YRELP+R+AE G+VYR E SG+LHGL RVRGFTQDD H+FC  +Q+ +E   + +L   +
Sbjct: 324 YRELPMRVAELGTVYRYERSGALHGLFRVRGFTQDDGHIFCLPDQIRDEIRGVLDLTEIV 383

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            K FGF K  + LST+PEK VGS  +W+ +   ++  L              +  G GAF
Sbjct: 384 LKQFGFTKFEINLSTKPEKAVGSHEIWEKSTTALREALQD------KGWEYSIDEGGGAF 437

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  ++DAIGR WQC TIQVDFNLP RFN  YV++ + +  P++IHRA+ GSIERF
Sbjct: 438 YGPKIDVKIEDAIGRKWQCSTIQVDFNLPERFNMVYVDTDTSRKQPILIHRAILGSIERF 497

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
            GI++EN+ G+ PLWL+P+QA +  +T   V+Y + +   L+   +  E  F  E +   
Sbjct: 498 FGILVENYAGDFPLWLAPVQARLLPVTDHEVDYCKNVVAKLREKGIRAEVVF-GERLGKL 556

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           IR    +KIP++ + G KE    ++ +R         +SL D    + 
Sbjct: 557 IRNAETQKIPVMAVVGPKEVESATLTVRTRHGGELGTLSLDDLTHKIQ 604


>gi|121535635|ref|ZP_01667441.1| threonyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
 gi|121305805|gb|EAX46741.1| threonyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
          Length = 513

 Score =  538 bits (1386), Expect = e-150,   Method: Composition-based stats.
 Identities = 241/520 (46%), Positives = 333/520 (64%), Gaps = 15/520 (2%)

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M++I+  D P  +  +S E+A  LF  + E YKVE++  +P    ++LYRQGE+ DLC G
Sbjct: 1   MEKIVKEDMPVERMEVSREEALRLFTEQGEVYKVELIRDLPEDVTISLYRQGEFIDLCAG 60

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV STG+VK   KL  +AGAYWRGD  R ML RIYGTA+  + +L  YL  LEE+ KRD
Sbjct: 61  PHVPSTGRVK-AIKLQSLAGAYWRGDEKRKMLQRIYGTAFEKKADLDAYLRMLEEAAKRD 119

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHL 304
           HRKL RE+DLF I ++G G  F+H KG  I   L ++ R+  +K  Y+EI TP +L Q L
Sbjct: 120 HRKLGRELDLFSIQDEGPGFPFFHPKGMVIRNELENFWRKLHVKYGYQEIKTPIILHQRL 179

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           WQQSGHWD YR NM+       T  D   +A+KPMNCPG + V+     SYR+LP+R  E
Sbjct: 180 WQQSGHWDHYRENMYF------TTIDGEGYAVKPMNCPGGILVYRTQHHSYRDLPLRTCE 233

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
            G V+R+E SG+LHGLMRVR FTQDDAH+F    Q+ +E   + +L   +Y  FG     
Sbjct: 234 LGLVHRHELSGALHGLMRVRSFTQDDAHIFMLPSQIKDEIQGVIDLFNEVYSTFGLTYHA 293

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
            +LST+PEK +GSD +W+ A N ++  L+      +  +   +  G+GAFYGPK ++ L+
Sbjct: 294 -ELSTKPEKAMGSDEIWEVATNALREALE------ERGMPYKINEGDGAFYGPKIDFHLR 346

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D+IGR WQCGTIQ+D  +P +F+  YV    +K  PVMIHR  +GS+ERFIGI+IE++ G
Sbjct: 347 DSIGRTWQCGTIQLDMLMPEKFDLTYVGEDGQKHRPVMIHRVAYGSLERFIGILIEHYAG 406

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             P WL+P+Q  +  IT   V YAQE+A L++S  + +E D RNE I YKIRE  ++K+P
Sbjct: 407 AFPTWLAPVQVKILPITDRHVAYAQEVATLMRSKDIRVEVDSRNEKIGYKIREGQLEKVP 466

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            ++I GDKE   R++ +R+ G       ++ D +  +  E
Sbjct: 467 YMLIVGDKETETRTVAVRKRGQGDIGAQAVDDFVAAILAE 506


>gi|254423005|ref|ZP_05036723.1| threonyl-tRNA synthetase [Synechococcus sp. PCC 7335]
 gi|196190494|gb|EDX85458.1| threonyl-tRNA synthetase [Synechococcus sp. PCC 7335]
          Length = 618

 Score =  538 bits (1385), Expect = e-150,   Method: Composition-based stats.
 Identities = 240/596 (40%), Positives = 359/596 (60%), Gaps = 21/596 (3%)

Query: 56  EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFS 115
           E  I+++  ++   L  IRH+ +H+MA AVQ ++P+ QV IGP I+ GFYYDFD  +PF+
Sbjct: 26  ETPIKLLRTDESEKLERIRHTFSHVMAMAVQRLFPKAQVTIGPSIDYGFYYDFDAPEPFT 85

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
             +L  I+K+M +II +  P +++ +S E+A+   E  KE YK+EILE +  +E +TLY 
Sbjct: 86  DKDLKSIKKEMVKIIKKGLPVIREEVSREEAKRRIEELKEPYKLEILERL--EEPITLYH 143

Query: 176 QGE-WFDLCRGPHVRSTGQVKK-FFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQ 233
            G+ W+DLC GPH+ +T  +    F+L  VAGAYWRGD  +  L RIYGTAW T +EL +
Sbjct: 144 LGDQWWDLCAGPHIETTKDLNPKAFELESVAGAYWRGDETKAQLQRIYGTAWETPEELKE 203

Query: 234 YLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDY 291
           Y    EE+++RDHRKL +E+ LF  +++ G G+  W  KG  +  TL  Y++  ++   Y
Sbjct: 204 YKRRKEEAKRRDHRKLGKELGLFIFSDEVGPGLPLWTPKGTVLRSTLEDYLKGEQVARGY 263

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
             + TP V    L++ SGHW  Y  ++F +        +   F LK MNCP HV ++   
Sbjct: 264 LPVVTPHVGRVDLFKTSGHWQKYSEDLFPMMGE----SEDEGFVLKAMNCPFHVQIYKSQ 319

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI 411
           L+SY+ELP+RLAEFG+VYR E SG L GL RVRGFTQDDAH+F T  Q+ +E LK+ +LI
Sbjct: 320 LRSYKELPIRLAEFGTVYRYEQSGELGGLTRVRGFTQDDAHLFVTPNQLNDEFLKVVDLI 379

Query: 412 ISIYKDFGFEKIM-----VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
            +  K    ++        +      K +GSD  W+ A++ ++  ++T+     + I   
Sbjct: 380 QATLKVLQMDQSFRARLSFRDPKNKSKYIGSDEAWEKAQSAIRQAVETMGMDHFEGI--- 436

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
              GE AFYGPK ++I++DA+ R+WQ GT+QVD+NLP RFN  YV     +  P+MIHRA
Sbjct: 437 ---GEAAFYGPKLDFIVRDALDREWQLGTVQVDYNLPERFNLEYVAEDGSRQRPIMIHRA 493

Query: 527 VFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF 586
            FGS+ER IGI+IE + G+ PLWL+P Q  +  +  S  EYA+  A  ++     +E D 
Sbjct: 494 PFGSLERLIGILIEQYAGDFPLWLAPEQVRLLPVAESHWEYAERAAIDMRKLGARVEVDK 553

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             E +   IR     KIP++ + GD+E ++ ++ IR         ++L + +  + 
Sbjct: 554 SGERLGKMIRNSEKAKIPVMSVIGDQEVTDNTLSIRTRKEGDLGAIALPEVLSRIK 609


>gi|182414299|ref|YP_001819365.1| threonyl-tRNA synthetase [Opitutus terrae PB90-1]
 gi|177841513|gb|ACB75765.1| threonyl-tRNA synthetase [Opitutus terrae PB90-1]
          Length = 637

 Score =  538 bits (1385), Expect = e-150,   Method: Composition-based stats.
 Identities = 232/627 (37%), Positives = 347/627 (55%), Gaps = 59/627 (9%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           L  +RHS +HI+A AV  ++P+ ++ IGP  + GFYYD D +  F++++L +IE +M++I
Sbjct: 6   LEELRHSGSHILATAVLRLFPDAKLDIGPPTDTGFYYDIDLDHKFTAEDLTRIEAEMKKI 65

Query: 130 IARDSPFLKQYLSHEKARELFESKKEA-YKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
              + PFL++ +S ++A ++ +++ +  YK+  L  IPA E ++ Y+ GE+ DLC G HV
Sbjct: 66  ADENQPFLRKEVSRDEAVQIIKARGQERYKLGRLADIPADEKISFYQNGEFVDLCAGTHV 125

Query: 189 RSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRK 248
           R T ++K F KL+ +AGAY RGD     L RIYGTA+ T++EL QYL   E+++ RDHRK
Sbjct: 126 RYTSKLKAF-KLLTIAGAYHRGDEKNKQLQRIYGTAFPTKEELAQYLERQEQAKARDHRK 184

Query: 249 LAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQ 306
           L +++ LFHI ED   G++ W   G  I Q L +++  +++   Y+++ TP +    L++
Sbjct: 185 LGKDLKLFHIDEDVGQGLVLWTPNGAVIRQELQNFISEELRKQGYQQVFTPHIGKLELYK 244

Query: 307 QSGHWDSY----------------------------------------------RANMFA 320
            SGH+  Y                                                   A
Sbjct: 245 TSGHFPYYKDSQFSPIFETDSLAKAIGENCSCAEAFARLEAVSANLAAQINARTGKESIA 304

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
                   + L  F LKPMNCP H+ +F     SYR+LPVRLAEFG+VYR E SG L+G+
Sbjct: 305 PDRVRPDDQLLSGFMLKPMNCPHHIKIFASQPHSYRDLPVRLAEFGTVYRWEQSGELNGM 364

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK---RVGS 437
            RVRGFTQDDAH+FCT+EQ+  E L   +L+  I    G     V++  R        G 
Sbjct: 365 TRVRGFTQDDAHLFCTEEQVAAEVLGCLSLVKIILSTLGMADYRVRVGLRDPDSNKYTGD 424

Query: 438 DALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ 497
            A WD AEN  +    T+       +      GE AFYGPK ++++KD IGR+WQ GT+Q
Sbjct: 425 AANWDKAENACREAAKTLG------VPFTEEPGEAAFYGPKIDFVIKDVIGREWQLGTVQ 478

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIV 557
           VD+NLP RF+  Y+ + ++   PVMIHRA FGS+ERF G++IE+F G+ P WL+P Q  +
Sbjct: 479 VDYNLPVRFDLSYIGADNQPHRPVMIHRAPFGSMERFCGVLIEHFAGDFPAWLAPEQVRL 538

Query: 558 TTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASER 617
             I+    +YA+ +   LK+ +     D  ++ +  KIR   I K+P  ++ G KEA   
Sbjct: 539 VPISDKVADYARALLGRLKAENFRATLDEHSDKLGAKIRRAEIDKVPYTLVIGQKEAEAN 598

Query: 618 SIGIRRFGSTTTQKVSLLDAIPILTKE 644
           S+ +R         ++    I  L  E
Sbjct: 599 SVSVRSRARGDEGVMTADAYIAKLKTE 625


>gi|289580635|ref|YP_003479101.1| threonyl-tRNA synthetase [Natrialba magadii ATCC 43099]
 gi|289530188|gb|ADD04539.1| threonyl-tRNA synthetase [Natrialba magadii ATCC 43099]
          Length = 650

 Score =  538 bits (1385), Expect = e-150,   Method: Composition-based stats.
 Identities = 254/648 (39%), Positives = 369/648 (56%), Gaps = 23/648 (3%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IE 60
           P+ + +  PDGS  +    AT  D A  I   L +  VA  ++G +     P  +G+ +E
Sbjct: 10  PAQLTVVLPDGSELHVDEGATVEDCAYEIGPGLGRDTVAGKLDGDLVAKEQPAYDGAELE 69

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           IIT +    LAV+RHS +H +A+AV+  + +V +AIGP  ++GFYYDFD       D+LA
Sbjct: 70  IITDQSEEYLAVMRHSASHCLAQAVERHYDDVDLAIGPPTDEGFYYDFD-NLDIDEDDLA 128

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESI-PAKENVTLYRQGEW 179
            +E ++ +I+  D    ++ +S E          E YK+E+L       E VT Y QGEW
Sbjct: 129 ALESEIADIVDEDYEIEREEVSIE--EAEERLADEPYKLELLSEFADENEQVTFYTQGEW 186

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLC GPHV STG++    KL+++AGAYWRGD   PM +RIYGTA+  + +L  +L   +
Sbjct: 187 EDLCAGPHVDSTGEIGPV-KLLEIAGAYWRGDEENPMQTRIYGTAFEDESDLENFLERKQ 245

Query: 240 ESEKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTP 297
           E+EKRDHR++  EM+LF I +  G G+  +H  G  + + L  ++        Y+ + TP
Sbjct: 246 EAEKRDHRRIGNEMNLFSIQDVTGPGLPLYHPPGKTVLKELEDFVEDLNKDAGYDYVETP 305

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            V    LW +SGH+++Y+ +MF     DD       F LKPMNCPGH A+F     SYR+
Sbjct: 306 HVFKTDLWHRSGHYENYQDDMFIFNVGDD------EFGLKPMNCPGHAAIFQDQSWSYRD 359

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R AE G VYR E  G L GL RV  FT DD H+F   +Q+  E  +I ++II + + 
Sbjct: 360 LPIRYAENGKVYRKEQRGELSGLSRVWAFTIDDGHLFIRPDQIEQEVEEIMDMIIDVLET 419

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           F  E  M  L+TRPEK VGSD +W+ AE  ++ VL+      +  +   +  G+GAFYGP
Sbjct: 420 FDLEYEMA-LATRPEKSVGSDEIWEHAEEQLETVLE------KRNLEYDIEEGDGAFYGP 472

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K ++  +DAIGR W   T+Q+DFN+P RF+  YV   +E+  PVMIHRA++GS ERF  +
Sbjct: 473 KIDFAFEDAIGRAWDGPTVQLDFNMPDRFDLSYVGEDNEEHEPVMIHRALYGSYERFFMM 532

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE+++G  P WL+P Q  V  I+ + + YA ++AN        +E D R+ T+  KIR 
Sbjct: 533 LIEHYEGKFPFWLAPEQVRVLPISDANLGYAYQVANEFDD--FRVEVDDRDSTLERKIRA 590

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
               ++P  II GD E  + +I +R         V + D    L  E 
Sbjct: 591 AHDDRVPYQIIVGDNEEEDGNISVRDRFEDQEYDVEIEDFHDHLVAER 638


>gi|314966718|gb|EFT10817.1| threonyl-tRNA synthetase [Propionibacterium acnes HL082PA2]
          Length = 689

 Score =  538 bits (1385), Expect = e-150,   Method: Composition-based stats.
 Identities = 236/674 (35%), Positives = 357/674 (52%), Gaps = 48/674 (7%)

Query: 4   DIKLTFPD-GSIK--NFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
            I +T    G+ +        TG D+  S      +  VA+ ++G + DL   + +G+ +
Sbjct: 7   SISITLHRSGTSRTQQVDTTTTGLDLFGS-----DRAVVAMRVDGNLVDLQRELHDGAEV 61

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           E +       L +IRHS  H+MA+AVQ ++PEV + IGP I DGFYYDF   +P + + L
Sbjct: 62  EPVEATSEDGLNIIRHSATHVMAQAVQQLYPEVNLGIGPFITDGFYYDFGNIEPVTPEVL 121

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK----------- 168
           +++EK+M+ I+  +  F+++  + E ARE  E   + YK+E++ +               
Sbjct: 122 SELEKRMKRIVKENQRFVRRVTTEESARE--ELADQPYKLELIGTKGKGAEGASVEVGGG 179

Query: 169 -----ENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
                +NV    +  W DLCRGPHV ST  +   F L K + AYW+GD     L RIYGT
Sbjct: 180 ELTIYDNVRRNGEVAWKDLCRGPHVPSTKYLANAFALTKFSAAYWKGDQANDQLQRIYGT 239

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISY 282
           AW ++++L  Y   ++E+E+RDHRKL  E+DLF   E+ G G++ +H KG  +   +  +
Sbjct: 240 AWASREDLAAYQQRIKEAERRDHRKLGAELDLFSFPEEIGPGLVVFHPKGAMLRHLIEEH 299

Query: 283 -MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD-------LRTF 334
            + R ++  +  ++TP++    L+  SGH   Y   MF     D+   +        + +
Sbjct: 300 VIARHMEAGFNFVHTPEITKGGLFHTSGHLPYYAGTMFPPMLVDEERDEEGNVTRAGQEY 359

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
            LK MNCP H  +F    +SYRELP+R  E G  YR E SG +HGL R+RGF QDD+H +
Sbjct: 360 YLKAMNCPMHNLIFRSRGRSYRELPLRFFEMGHDYRYEKSGVVHGLTRMRGFAQDDSHTY 419

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP------EKRVGSDALWDDAENIM 448
           CT+EQ   E  K     +SI  DFG     ++LSTR       EK +GSD  W  A + +
Sbjct: 420 CTREQAPGEIKKQIEFFLSILADFGLNDFYLELSTRESDSAKEEKFIGSDEDWQVATDTL 479

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
             V  +        +      G  AFYGPK    ++DAIGR WQ  TIQ DFN P RF+ 
Sbjct: 480 DQVCRSTG------LRLVPDPGGAAFYGPKVSVQVRDAIGRTWQMSTIQYDFNQPERFDL 533

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYA 568
            Y  +      P+M+H A  GS+ERFIG++ E++ G  P+WLSP+Q  +  +  +  +Y 
Sbjct: 534 EYAAADGTHQRPIMLHSAKLGSVERFIGVLTEHYAGAFPVWLSPVQVRLVPVAEAFNDYV 593

Query: 569 QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
              A +L S  + +ETD  ++    KIR  S  K+P I+I G ++A   ++  R    + 
Sbjct: 594 TGFAEVLGSRGIRVETDLSSDRFGKKIRNASKDKVPFILIAGGEDAEAGAVSFRLRDGSQ 653

Query: 629 TQKVSLLDAIPILT 642
              V L +A+ I+T
Sbjct: 654 INGVVLDEAVRIIT 667


>gi|315098581|gb|EFT70557.1| threonyl-tRNA synthetase [Propionibacterium acnes HL059PA2]
          Length = 689

 Score =  538 bits (1385), Expect = e-150,   Method: Composition-based stats.
 Identities = 235/674 (34%), Positives = 354/674 (52%), Gaps = 48/674 (7%)

Query: 4   DIKLTFPD-GSIK--NFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
            I +T    G+ +        TG D+  S      +  VA+ ++G + DL   + +G+ +
Sbjct: 7   SISITLHRSGTSRTQQVDTTTTGLDLFGS-----DRAVVAMRVDGNLVDLQRELHDGAEV 61

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           E +       L +IRHS  H+MA+AVQ ++PEV + IGP I DGFYYDF   +P + + L
Sbjct: 62  EPVEATSEDGLNIIRHSATHVMAQAVQQLYPEVNLGIGPFITDGFYYDFGNIEPVTPEVL 121

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK----------- 168
           +++EK+M+ I+  +  F+++  + E ARE  E   + YK+E++ +               
Sbjct: 122 SELEKRMKRIVKENQRFVRRVTTEESARE--ELADQPYKLELIGTKGKGAEGASVEVGGG 179

Query: 169 -----ENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
                +NV    +  W DLCRGPHV ST  +   F L K + AYW+GD     L RIYGT
Sbjct: 180 ELTIYDNVRRNGEVAWKDLCRGPHVPSTKYLANTFALTKFSAAYWKGDQANDQLQRIYGT 239

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISY 282
           AW ++  L  Y   ++E+E+RDHRKL  E+DLF   E+ G G++ +H KG  +   +  +
Sbjct: 240 AWASRDGLAAYQQRIKEAERRDHRKLGAELDLFSFPEEIGPGLVVFHPKGAMLRHLIEEH 299

Query: 283 -MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD-------LRTF 334
            + R ++  +  ++TP++    L+  SGH   Y   MF     D+   +        + +
Sbjct: 300 VIARHMEAGFNFVHTPEITKGGLFHTSGHLPYYADTMFPPMLVDEERDEEGNVTRAGQEY 359

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
            LK MNCP H  +F    +SYRELP+R  E G  YR E SG +HGL R+RGF QDD+H +
Sbjct: 360 YLKAMNCPMHNLIFRSRGRSYRELPLRFFEMGHDYRYEKSGVVHGLTRMRGFAQDDSHTY 419

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP------EKRVGSDALWDDAENIM 448
           CT+EQ   E  K     +SI  DFG     ++LSTR       EK +GSD  W  A + +
Sbjct: 420 CTREQAPGEIKKQIEFFLSILADFGLNDFYLELSTRESDSAKKEKFIGSDEDWQVATDTL 479

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
             V  +        +      G  AFYGPK    ++DAIGR WQ  TIQ DFN P RF+ 
Sbjct: 480 DQVCRSTG------LQLVPDPGGAAFYGPKVSVQVRDAIGRTWQMSTIQYDFNQPERFDL 533

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYA 568
            Y  +      P+M+H A  GS+ERFIG++ E++ G  P+WLSP+Q  +  +  +  +Y 
Sbjct: 534 EYAAADGTHQRPIMLHSAKLGSVERFIGVLTEHYAGAFPVWLSPVQVRLVPVAEAFNDYV 593

Query: 569 QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
              A +L S  + +ETD  ++    KIR  S  K+P I+I G ++A   ++  R    + 
Sbjct: 594 TGFAEVLGSRGIRVETDLSSDRFGKKIRNASKDKVPFILIAGGEDAEAGAVSFRLRDGSQ 653

Query: 629 TQKVSLLDAIPILT 642
              V L +A+ I+ 
Sbjct: 654 VNGVVLDEAVRIIA 667


>gi|328754594|gb|EGF68210.1| threonyl-tRNA synthetase [Propionibacterium acnes HL025PA2]
          Length = 689

 Score =  538 bits (1385), Expect = e-150,   Method: Composition-based stats.
 Identities = 235/674 (34%), Positives = 355/674 (52%), Gaps = 48/674 (7%)

Query: 4   DIKLTFPD-GSIK--NFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
            I +T    G+ +        TG D+  S      +  VA+ ++G + DL   + +G+ +
Sbjct: 7   SISITLHRSGTSRTQQVDTTTTGLDLFGS-----DRAVVAMRVDGNLVDLQRELHDGADV 61

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           E +       L +IRHS  H+MA+AVQ ++PEV + IGP I DGFYYDF   +P + + L
Sbjct: 62  EPVEATSEDGLNIIRHSATHVMAQAVQQLYPEVNLGIGPFITDGFYYDFGNIEPVTPEVL 121

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK----------- 168
           +++EK+M+ I+  +  F+++  + E ARE  E   + YK+E++ +               
Sbjct: 122 SELEKRMKRIVKENQRFVRRVTTEESARE--ELADQPYKLELIGTKGKGAEGASVEVGGG 179

Query: 169 -----ENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
                +NV    +  W DLCRGPHV ST  +   F L K + AYW+GD     L RIYGT
Sbjct: 180 ELTIYDNVRRNGEVAWKDLCRGPHVPSTKYLANTFALTKFSAAYWKGDQANDQLQRIYGT 239

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISY 282
           AW +++ L  Y   ++E+E+RDHRKL  E+DLF   E+ G G++ +H KG  +   +  +
Sbjct: 240 AWASREGLAAYQQRIKEAERRDHRKLGAELDLFSFPEEIGPGLVVFHPKGAMLRHLIEEH 299

Query: 283 -MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD-------LRTF 334
            + R ++  +  ++TP++    L+  SGH   Y   MF     D+   +        + +
Sbjct: 300 VIARHMEAGFNFVHTPEITKGGLFHTSGHLPYYADTMFPPMLVDEERDEEGNVTRAGQEY 359

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
            LK MNCP H  +F    +SYRELP+R  E G  YR E SG +HGL R+RGF QDD+H +
Sbjct: 360 YLKAMNCPMHNLIFRSRGRSYRELPLRFFEMGHDYRYEKSGVVHGLTRMRGFAQDDSHTY 419

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP------EKRVGSDALWDDAENIM 448
           CT+EQ   E  K     +SI  DFG     ++LSTR       EK +GSD  W  A + +
Sbjct: 420 CTREQAPGEIKKQIEFFLSILADFGLNDFYLELSTRESDSAKKEKFIGSDEDWQVATDTL 479

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
             V  +        +      G  AFYGPK    ++DAIGR WQ  TIQ DFN P RF+ 
Sbjct: 480 DQVCRSTG------LQLVPDPGGAAFYGPKVSVQVRDAIGRTWQMSTIQYDFNQPERFDL 533

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYA 568
            Y  +      P+M+H A  GS+ERFIG++ E++ G  P+WLSP+Q  +  +  +  +Y 
Sbjct: 534 EYAAADGTHQRPIMLHSAKLGSVERFIGVLTEHYAGAFPVWLSPVQVRLVPVAEAFNDYV 593

Query: 569 QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
              A +L S  + +ETD  ++    KIR  S  K+P I+I G ++A   ++  R    + 
Sbjct: 594 TGFAEVLGSRGIRVETDLSSDRFGKKIRNASKDKVPFILIAGGEDAEAGAVSFRLRDGSQ 653

Query: 629 TQKVSLLDAIPILT 642
              V L +A+ I+ 
Sbjct: 654 VNGVVLDEAVRIIA 667


>gi|73919796|sp|Q5UX65|SYT_HALMA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
          Length = 642

 Score =  538 bits (1385), Expect = e-150,   Method: Composition-based stats.
 Identities = 228/646 (35%), Positives = 355/646 (54%), Gaps = 23/646 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           S + +T PDG+       +T  DVA  I   L    VA  ++G++ D   P+  +  +EI
Sbjct: 2   STVTVTLPDGTPLEVERGSTVEDVAYEIGPGLGDDTVAGVVDGELVDKHAPLTADVELEI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +T      L V+RHS AH+ A+A+Q ++ + ++ IGP  ++GFYYD         D+L  
Sbjct: 62  VTESSDEYLDVLRHSAAHVFAQALQRLYSDAKLTIGPWTDNGFYYDITGVD-IDEDDLEA 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE-SIPAKENVTLYRQGEWF 180
           IE + +EII  D    ++ +  + A E +E  +  +K +ILE      E V+ Y QGE+ 
Sbjct: 121 IEAEAEEIIEEDLDIERELVDRDDAFERYEDNQ--FKQDILETEAADDEEVSFYTQGEFE 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLC+GPHV STG++  F  L +++ A+WRG+     L+R+YGTA+ T+  L ++L    +
Sbjct: 179 DLCQGPHVESTGEIGGFALL-EISAAFWRGEEENETLTRVYGTAFPTEDALDEFLEQRRK 237

Query: 241 SEKRDHRKLAREMDLFHIAEDG-SGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           +E+RDHRK+ +EMDLF I E    G+  +   G KI   L  Y+        Y+E+ TP 
Sbjct: 238 AEERDHRKIGQEMDLFSIDETTGPGLPLYEPNGKKILNELSDYVAGLNRDAGYDEVETPH 297

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    LW++SGH+++Y  +MF +   D        + LKPMNCPGH  +F     SYR+L
Sbjct: 298 VFRTELWKKSGHYENYVDDMFLLDVND------EEYGLKPMNCPGHATIFEQNSWSYRDL 351

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           PVR  E G VYR E  G L GL R   FT DD H+F   +Q+  E L   ++I+     F
Sbjct: 352 PVRYFEDGKVYRKEQRGELSGLSRTWAFTIDDGHLFVRPDQIEEEVLATVDIILDTLDTF 411

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
             +  +   +TRPEK VG D +W+ AE+ ++ VL+      +  I+  V  G+GAFYGPK
Sbjct: 412 NLDYTVQF-ATRPEKSVGGDEIWEKAESQLESVLE------EQDIDYVVEEGDGAFYGPK 464

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++  +DA+GR W   T+Q+DFN+P RF+  Y    +E+  PVMIHRA++GS ERF  ++
Sbjct: 465 IDFAFEDALGRHWDGPTVQLDFNMPERFDLSYTGEDNEEHRPVMIHRALYGSYERFFMVL 524

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
            E++ G  P WL+P Q  +  ++   + Y +EI + L      +  + R+ T+  KI++ 
Sbjct: 525 TEHYNGKFPPWLAPEQIRLLPVSDDNITYCEEIQDELDD--FRVTIEDRSWTVGKKIQQA 582

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
              ++P + + GD E    +I +R       + + + +    L  E
Sbjct: 583 HDDRVPYMCVIGDNEEEAGTISVRDRKEREEKDIDIAEFRDHLETE 628


>gi|327331893|gb|EGE73630.1| threonine--tRNA ligase [Propionibacterium acnes HL096PA3]
          Length = 689

 Score =  538 bits (1385), Expect = e-150,   Method: Composition-based stats.
 Identities = 235/674 (34%), Positives = 355/674 (52%), Gaps = 48/674 (7%)

Query: 4   DIKLTFPD-GSIK--NFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
            I +T    G+ +        TG D+  S      +  VA+ ++G + DL   + +G+ +
Sbjct: 7   SISITLHRSGTSRTQQVDTTTTGLDLFGS-----DRAVVAMRVDGNLVDLQRELHDGAEV 61

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           E +       L +IRHS  H+MA+AVQ ++PEV + IGP I DGFYYDF   +P + + L
Sbjct: 62  EPVEATSEDGLNIIRHSATHVMAQAVQQLYPEVNLGIGPFITDGFYYDFGNIEPVTPEVL 121

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK----------- 168
           +++EK+M+ I+  +  F+++  + E ARE  E   + YK+E++ +               
Sbjct: 122 SELEKRMKRIVKENQRFVRRVTTEESARE--ELADQPYKLELIGTKGKGAEGASVEVGGG 179

Query: 169 -----ENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
                +NV    +  W DLCRGPHV ST  +   F L K + AYW+GD     L RIYGT
Sbjct: 180 ELTIYDNVRRNGEVAWKDLCRGPHVPSTKYLANTFALTKFSAAYWKGDQANDQLQRIYGT 239

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISY 282
           AW +++ L  Y   ++E+E+RDHRKL  E+DLF   E+ G G++ +H KG  +   +  +
Sbjct: 240 AWASREGLAAYQQRIKEAERRDHRKLGAELDLFSFPEEIGPGLVVFHPKGAMLRHLIEEH 299

Query: 283 -MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD-------LRTF 334
            + R ++  +  ++TP++    L+  SGH   Y   MF     D+   +        + +
Sbjct: 300 VIARHMEAGFNFVHTPEITKGGLFHTSGHLPYYADTMFPPMLVDEERDEEGNVTRAGQEY 359

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
            LK MNCP H  +F    +SYRELP+R  E G  YR E SG +HGL R+RGF QDD+H +
Sbjct: 360 YLKAMNCPMHNLIFRSRGRSYRELPLRFFEMGHDYRYEKSGVVHGLTRMRGFAQDDSHTY 419

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP------EKRVGSDALWDDAENIM 448
           CT+EQ   E  K     +SI  DFG     ++LSTR       EK +GSD  W  A + +
Sbjct: 420 CTREQAPGEIKKQIEFFLSILADFGLNDFYLELSTRESDSAKKEKFIGSDEDWQVATDTL 479

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
             V  +        +      G  AFYGPK    ++DAIGR WQ  TIQ DFN P RF+ 
Sbjct: 480 DQVCRSTG------LQLVPDPGGAAFYGPKVSVQVRDAIGRTWQMSTIQYDFNQPERFDL 533

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYA 568
            Y  +      P+M+H A  GS+ERFIG++ E++ G  P+WLSP+Q  +  +  +  +Y 
Sbjct: 534 EYAAADGTHQRPIMLHSAKLGSVERFIGVLTEHYAGAFPVWLSPVQVRLVPVAEAFNDYV 593

Query: 569 QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
              A +L S  + +ETD  ++    KIR  S  K+P I+I G ++A   ++  R    + 
Sbjct: 594 TGFAEVLGSRGIRVETDLSSDRFGKKIRNASKDKVPFILIAGGEDAEAGAVSFRLRDGSQ 653

Query: 629 TQKVSLLDAIPILT 642
              V L +A+ I+ 
Sbjct: 654 VNGVVLDEAVRIIA 667


>gi|196000905|ref|XP_002110320.1| hypothetical protein TRIADDRAFT_22327 [Trichoplax adhaerens]
 gi|190586271|gb|EDV26324.1| hypothetical protein TRIADDRAFT_22327 [Trichoplax adhaerens]
          Length = 603

 Score =  538 bits (1385), Expect = e-150,   Method: Composition-based stats.
 Identities = 222/620 (35%), Positives = 352/620 (56%), Gaps = 24/620 (3%)

Query: 5   IKLTFPDGS-IKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
           I++   DG          T  +VA++IS+ L+K+ V   ++  + DL  P+  + S++++
Sbjct: 1   IRIRLLDGQHTFGTSYITTPLEVAQAISKQLSKEVVVAVVDNSIWDLQAPLTNDCSLKLL 60

Query: 63  TP-EDPRSLAVIRHSCAHIMAEAVQSIWPE---VQVAIGPIIEDGFYYDFDKEQPFSSDE 118
              +DP +  V  HS +H++  A++ ++     VQ+  GP +E G              +
Sbjct: 61  KFRDDPLAKQVFWHSSSHLLGYAMEKLYGSEVPVQLCNGPPLEQG-------NVSLPEGD 113

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L ++EK   +++  +  F +  L+   A E+   +   YK+EI++ +   + +T Y+ G+
Sbjct: 114 LNKLEKIAVDLVKENLSFERIELTINAALEM--FRYNPYKIEIIKKLDPGDTITAYKCGD 171

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + DLCRGPH+  TG +K    + K +  +  GD++   L R+YG A+  +  L  +L   
Sbjct: 172 FIDLCRGPHLPRTGMIK-AIAMTKESSVHKSGDTSSAQLQRVYGIAFPKKDLLKDWLKMQ 230

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
           +E+++RDHR + ++  LF       G  F    G +I   L ++++ + +   Y E+ TP
Sbjct: 231 QEAKERDHRTIGKDQKLFFFNPLSPGNAFLLPHGLRIINKLKNFLKDEYRVRGYHEVETP 290

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
              +Q LW QSGHWD Y  +MF ++      ++  + +LKPMNCPGH  +F +   SYR+
Sbjct: 291 LTFNQELWVQSGHWDHYSDDMFRLQSDPQDHENRGSISLKPMNCPGHCLIFGNERHSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LPVRLAEF +++R+EPSGSL GL R+R F QDDAH+FCTK+Q+  E     +LI   Y  
Sbjct: 351 LPVRLAEFSALHRDEPSGSLGGLTRLRQFHQDDAHIFCTKDQIGEEVQDCLDLINKAYSI 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           F F   M KLSTRPE  +G  A+W++AEN +  +L++            V  G+GAFYGP
Sbjct: 411 FDFNYTM-KLSTRPEGYLGETAVWEEAENRLVNILNSTGK------EWSVNDGDGAFYGP 463

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K + +++DAIGR  Q  TIQ+DF LP RFN  ++NS  E  HPV+IHRA+FGS ERF+GI
Sbjct: 464 KIDVMIQDAIGRSHQTATIQLDFQLPKRFNLQFMNSSGELEHPVIIHRAIFGSFERFLGI 523

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE+  GN P W+SP Q  V +++    +YA+EI + LK + L  + D  +  +N KIR 
Sbjct: 524 LIEHTAGNWPFWISPRQVSVCSVSERHNDYAREICDSLKINGLYADLDITDVVLNRKIRL 583

Query: 598 HSIKKIPIIIICGDKEASER 617
             +     I + G +E   +
Sbjct: 584 SRLAGYNYIAVVGKEEFESK 603


>gi|323447698|gb|EGB03610.1| hypothetical protein AURANDRAFT_55515 [Aureococcus anophagefferens]
          Length = 657

 Score =  538 bits (1385), Expect = e-150,   Method: Composition-based stats.
 Identities = 245/582 (42%), Positives = 349/582 (59%), Gaps = 17/582 (2%)

Query: 67  PRSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
              L  IRHS +HIMA AV+ ++  +VQV IGP IE+GFYYDF +E+  S  +L +I+K+
Sbjct: 55  EEELVKIRHSTSHIMALAVKRVFKDDVQVTIGPWIENGFYYDFYREEQISDKDLKRIKKE 114

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE-WFDLCR 184
           M +II  D P +++ +  E+AR    ++ E +KVE+L+ I   + ++ YR G+ W+DLC 
Sbjct: 115 MDKIIKADLPIIREVVPREEARARLLAEGETFKVEVLDGIT-DDTISFYRIGDEWWDLCA 173

Query: 185 GPHVRSTGQVKK-FFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           GPHV STG +K     L  VAGAYWRGD  R ML RIYGTAW    +L ++   LEE++K
Sbjct: 174 GPHVPSTGAIKPKAVALQSVAGAYWRGDEKREMLQRIYGTAWQENWQLAEHKRRLEEAKK 233

Query: 244 RDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLD 301
           RDHR L +++DLF I E  G G+ FWH +G +I   +    +   +   YE + TP + +
Sbjct: 234 RDHRVLGKKLDLFSIQEAAGGGLCFWHPRGARIRMLMEDTWKAAHERGGYELLVTPHIAN 293

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             LW+ SGH+D Y   MF          +   + LKPMNCP H  V+   L+SYR+LP R
Sbjct: 294 VDLWKTSGHFDFYAEGMFDQMDV-----EKEQYQLKPMNCPFHCLVYKDQLRSYRDLPFR 348

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
            AE G+VYR E SG+L GLMRVRGFTQDDAH+FCT EQ+ +E + +  L   I   FGF+
Sbjct: 349 WAELGTVYRYERSGTLQGLMRVRGFTQDDAHIFCTPEQLEDEIVAVLELTEEILSKFGFD 408

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              + LSTRP+K VGSD +W  A   +KG LD      +   + GV  G GAFYGPK + 
Sbjct: 409 DYELMLSTRPDKAVGSDEIWTKATAALKGALD------RKGWDHGVDEGGGAFYGPKIDL 462

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +KDA+GR WQC T+Q DFNLP RF   Y  +  +   P+M+HRA+FGS+ERF  I++E+
Sbjct: 463 KIKDALGRQWQCSTVQCDFNLPERFELEYRAASGQAERPIMVHRAIFGSLERFFAILLES 522

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G+LPLWL+P Q  +  +T  A ++++ +A       +  E D   + +N +IR    +
Sbjct: 523 CGGDLPLWLAPTQMRLLPVTDDARDFSKAVAAKAAQRGIRCEIDSGKDRLNKQIRNAETQ 582

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           ++PI+ + G+KE +   + +R         + +      L  
Sbjct: 583 RVPIMCVVGEKEMASGDLAVRARTMGDLGTIDVDALFDELKD 624


>gi|313764410|gb|EFS35774.1| threonyl-tRNA synthetase [Propionibacterium acnes HL013PA1]
 gi|313772208|gb|EFS38174.1| threonyl-tRNA synthetase [Propionibacterium acnes HL074PA1]
 gi|313807564|gb|EFS46051.1| threonyl-tRNA synthetase [Propionibacterium acnes HL087PA2]
 gi|313810073|gb|EFS47794.1| threonyl-tRNA synthetase [Propionibacterium acnes HL083PA1]
 gi|313815947|gb|EFS53661.1| threonyl-tRNA synthetase [Propionibacterium acnes HL059PA1]
 gi|313818605|gb|EFS56319.1| threonyl-tRNA synthetase [Propionibacterium acnes HL046PA2]
 gi|313820374|gb|EFS58088.1| threonyl-tRNA synthetase [Propionibacterium acnes HL036PA1]
 gi|313822822|gb|EFS60536.1| threonyl-tRNA synthetase [Propionibacterium acnes HL036PA2]
 gi|313825247|gb|EFS62961.1| threonyl-tRNA synthetase [Propionibacterium acnes HL063PA1]
 gi|313827535|gb|EFS65249.1| threonyl-tRNA synthetase [Propionibacterium acnes HL063PA2]
 gi|313830403|gb|EFS68117.1| threonyl-tRNA synthetase [Propionibacterium acnes HL007PA1]
 gi|313833773|gb|EFS71487.1| threonyl-tRNA synthetase [Propionibacterium acnes HL056PA1]
 gi|314915402|gb|EFS79233.1| threonyl-tRNA synthetase [Propionibacterium acnes HL005PA4]
 gi|314918317|gb|EFS82148.1| threonyl-tRNA synthetase [Propionibacterium acnes HL050PA1]
 gi|314920127|gb|EFS83958.1| threonyl-tRNA synthetase [Propionibacterium acnes HL050PA3]
 gi|314925261|gb|EFS89092.1| threonyl-tRNA synthetase [Propionibacterium acnes HL036PA3]
 gi|314931649|gb|EFS95480.1| threonyl-tRNA synthetase [Propionibacterium acnes HL067PA1]
 gi|314955705|gb|EFT00107.1| threonyl-tRNA synthetase [Propionibacterium acnes HL027PA1]
 gi|314958104|gb|EFT02207.1| threonyl-tRNA synthetase [Propionibacterium acnes HL002PA1]
 gi|314959956|gb|EFT04058.1| threonyl-tRNA synthetase [Propionibacterium acnes HL002PA2]
 gi|314973405|gb|EFT17501.1| threonyl-tRNA synthetase [Propionibacterium acnes HL053PA1]
 gi|314976084|gb|EFT20179.1| threonyl-tRNA synthetase [Propionibacterium acnes HL045PA1]
 gi|314978527|gb|EFT22621.1| threonyl-tRNA synthetase [Propionibacterium acnes HL072PA2]
 gi|314983896|gb|EFT27988.1| threonyl-tRNA synthetase [Propionibacterium acnes HL005PA1]
 gi|314988078|gb|EFT32169.1| threonyl-tRNA synthetase [Propionibacterium acnes HL005PA2]
 gi|314989885|gb|EFT33976.1| threonyl-tRNA synthetase [Propionibacterium acnes HL005PA3]
 gi|315085609|gb|EFT57585.1| threonyl-tRNA synthetase [Propionibacterium acnes HL002PA3]
 gi|315088339|gb|EFT60315.1| threonyl-tRNA synthetase [Propionibacterium acnes HL072PA1]
 gi|315095950|gb|EFT67926.1| threonyl-tRNA synthetase [Propionibacterium acnes HL038PA1]
 gi|315101418|gb|EFT73394.1| threonyl-tRNA synthetase [Propionibacterium acnes HL046PA1]
 gi|315105605|gb|EFT77581.1| threonyl-tRNA synthetase [Propionibacterium acnes HL030PA1]
 gi|315108634|gb|EFT80610.1| threonyl-tRNA synthetase [Propionibacterium acnes HL030PA2]
 gi|327326232|gb|EGE68022.1| threonine--tRNA ligase [Propionibacterium acnes HL096PA2]
 gi|327443095|gb|EGE89749.1| threonyl-tRNA synthetase [Propionibacterium acnes HL013PA2]
 gi|327445877|gb|EGE92531.1| threonyl-tRNA synthetase [Propionibacterium acnes HL043PA2]
 gi|327448141|gb|EGE94795.1| threonyl-tRNA synthetase [Propionibacterium acnes HL043PA1]
 gi|327450737|gb|EGE97391.1| threonyl-tRNA synthetase [Propionibacterium acnes HL087PA3]
 gi|327453921|gb|EGF00576.1| threonyl-tRNA synthetase [Propionibacterium acnes HL083PA2]
 gi|328753425|gb|EGF67041.1| threonyl-tRNA synthetase [Propionibacterium acnes HL020PA1]
 gi|328754156|gb|EGF67772.1| threonyl-tRNA synthetase [Propionibacterium acnes HL087PA1]
 gi|328760808|gb|EGF74374.1| threonine--tRNA ligase [Propionibacterium acnes HL099PA1]
          Length = 689

 Score =  537 bits (1384), Expect = e-150,   Method: Composition-based stats.
 Identities = 235/674 (34%), Positives = 355/674 (52%), Gaps = 48/674 (7%)

Query: 4   DIKLTFPD-GSIK--NFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
            I +T    G+ +        TG D+  S      +  VA+ ++G + DL   + +G+ +
Sbjct: 7   SISITLHRSGTSRTQQVDTTTTGLDLFGS-----DRAVVAMRVDGNLVDLQRELHDGAEV 61

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           E +       L +IRHS  H+MA+AVQ ++PEV + IGP I DGFYYDF   +P + + L
Sbjct: 62  EPVEATSEDGLNIIRHSATHVMAQAVQQLYPEVNLGIGPFITDGFYYDFGNIEPVTPEVL 121

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK----------- 168
           +++EK+M+ I+  +  F+++  + E ARE  E   + YK+E++ +               
Sbjct: 122 SELEKRMKRIVKENQRFVRRVTTEESARE--ELADQPYKLELIGTKGKGAEGASVEVGGG 179

Query: 169 -----ENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
                +NV    +  W DLCRGPHV ST  +   F L K + AYW+GD     L RIYGT
Sbjct: 180 ELTIYDNVRRNGEVAWKDLCRGPHVPSTKYLANTFALTKFSAAYWKGDQANDQLQRIYGT 239

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISY 282
           AW +++ L  Y   ++E+E+RDHRKL  E+DLF   E+ G G++ +H KG  +   +  +
Sbjct: 240 AWASREGLAAYQQRIKEAERRDHRKLGAELDLFSFPEEIGPGLVVFHPKGAMLRHLIEEH 299

Query: 283 -MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD-------LRTF 334
            + R ++  +  ++TP++    L+  SGH   Y   MF     D+   +        + +
Sbjct: 300 VIARHMEAGFNFVHTPEITKGGLFHTSGHLPYYADTMFPPMLVDEERDEEGNVTRAGQEY 359

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
            LK MNCP H  +F    +SYRELP+R  E G  YR E SG +HGL R+RGF QDD+H +
Sbjct: 360 YLKAMNCPMHNLIFRSRGRSYRELPLRFFEMGHDYRYEKSGVVHGLTRMRGFAQDDSHTY 419

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP------EKRVGSDALWDDAENIM 448
           CT+EQ   E  K     +SI  DFG     ++LSTR       EK +GSD  W  A + +
Sbjct: 420 CTREQAPGEIKKQIEFFLSILADFGLNDFYLELSTRESDSAKKEKFIGSDEDWQVATDTL 479

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
             V  +        +      G  AFYGPK    ++DAIGR WQ  TIQ DFN P RF+ 
Sbjct: 480 DQVCRSTG------LQLVPDPGGAAFYGPKVSVQVRDAIGRTWQMSTIQYDFNQPERFDL 533

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYA 568
            Y  +      P+M+H A  GS+ERFIG++ E++ G  P+WLSP+Q  +  +  +  +Y 
Sbjct: 534 EYAAADGTHQRPIMLHSAKLGSVERFIGVLTEHYAGAFPVWLSPVQVRLVPVAEAFNDYV 593

Query: 569 QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
              A +L S  + +ETD  ++    KIR  S  K+P I+I G ++A   ++  R    + 
Sbjct: 594 TGFAEVLGSRGIRVETDLSSDRFGKKIRNASKDKVPFILIAGGEDAEAGAVSFRLRDGSQ 653

Query: 629 TQKVSLLDAIPILT 642
              V L +A+ I+ 
Sbjct: 654 VNGVVLDEAVRIIA 667


>gi|50842554|ref|YP_055781.1| threonyl-tRNA synthetase [Propionibacterium acnes KPA171202]
 gi|289426579|ref|ZP_06428319.1| threonine--tRNA ligase [Propionibacterium acnes J165]
 gi|295130636|ref|YP_003581299.1| threonine--tRNA ligase [Propionibacterium acnes SK137]
 gi|73919815|sp|Q6A8U3|SYT_PROAC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|50840156|gb|AAT82823.1| threonyl-tRNA synthetase [Propionibacterium acnes KPA171202]
 gi|289160223|gb|EFD08387.1| threonine--tRNA ligase [Propionibacterium acnes J165]
 gi|291376551|gb|ADE00406.1| threonine--tRNA ligase [Propionibacterium acnes SK137]
 gi|332675479|gb|AEE72295.1| threonine--tRNA ligase [Propionibacterium acnes 266]
          Length = 684

 Score =  537 bits (1384), Expect = e-150,   Method: Composition-based stats.
 Identities = 235/674 (34%), Positives = 355/674 (52%), Gaps = 48/674 (7%)

Query: 4   DIKLTFPD-GSIK--NFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
            I +T    G+ +        TG D+  S      +  VA+ ++G + DL   + +G+ +
Sbjct: 2   SISITLHRSGTSRTQQVDTTTTGLDLFGS-----DRAVVAMRVDGNLVDLQRELHDGAEV 56

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           E +       L +IRHS  H+MA+AVQ ++PEV + IGP I DGFYYDF   +P + + L
Sbjct: 57  EPVEATSEDGLNIIRHSATHVMAQAVQQLYPEVNLGIGPFITDGFYYDFGNIEPVTPEVL 116

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK----------- 168
           +++EK+M+ I+  +  F+++  + E ARE  E   + YK+E++ +               
Sbjct: 117 SELEKRMKRIVKENQRFVRRVTTEESARE--ELADQPYKLELIGTKGKGAEGASVEVGGG 174

Query: 169 -----ENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
                +NV    +  W DLCRGPHV ST  +   F L K + AYW+GD     L RIYGT
Sbjct: 175 ELTIYDNVRRNGEVAWKDLCRGPHVPSTKYLANTFALTKFSAAYWKGDQANDQLQRIYGT 234

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISY 282
           AW +++ L  Y   ++E+E+RDHRKL  E+DLF   E+ G G++ +H KG  +   +  +
Sbjct: 235 AWASREGLAAYQQRIKEAERRDHRKLGAELDLFSFPEEIGPGLVVFHPKGAMLRHLIEEH 294

Query: 283 -MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD-------LRTF 334
            + R ++  +  ++TP++    L+  SGH   Y   MF     D+   +        + +
Sbjct: 295 VIARHMEAGFNFVHTPEITKGGLFHTSGHLPYYADTMFPPMLVDEERDEEGNVTRAGQEY 354

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
            LK MNCP H  +F    +SYRELP+R  E G  YR E SG +HGL R+RGF QDD+H +
Sbjct: 355 YLKAMNCPMHNLIFRSRGRSYRELPLRFFEMGHDYRYEKSGVVHGLTRMRGFAQDDSHTY 414

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP------EKRVGSDALWDDAENIM 448
           CT+EQ   E  K     +SI  DFG     ++LSTR       EK +GSD  W  A + +
Sbjct: 415 CTREQAPGEIKKQIEFFLSILADFGLNDFYLELSTRESDSAKKEKFIGSDEDWQVATDTL 474

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
             V  +        +      G  AFYGPK    ++DAIGR WQ  TIQ DFN P RF+ 
Sbjct: 475 DQVCRSTG------LQLVPDPGGAAFYGPKVSVQVRDAIGRTWQMSTIQYDFNQPERFDL 528

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYA 568
            Y  +      P+M+H A  GS+ERFIG++ E++ G  P+WLSP+Q  +  +  +  +Y 
Sbjct: 529 EYAAADGTHQRPIMLHSAKLGSVERFIGVLTEHYAGAFPVWLSPVQVRLVPVAEAFNDYV 588

Query: 569 QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
              A +L S  + +ETD  ++    KIR  S  K+P I+I G ++A   ++  R    + 
Sbjct: 589 TGFAEVLGSRGIRVETDLSSDRFGKKIRNASKDKVPFILIAGGEDAEAGAVSFRLRDGSQ 648

Query: 629 TQKVSLLDAIPILT 642
              V L +A+ I+ 
Sbjct: 649 VNGVVLDEAVRIIA 662


>gi|187250976|ref|YP_001875458.1| threonyl-tRNA synthetase [Elusimicrobium minutum Pei191]
 gi|186971136|gb|ACC98121.1| Threonyl-tRNA synthetase [Elusimicrobium minutum Pei191]
          Length = 583

 Score =  537 bits (1384), Expect = e-150,   Method: Composition-based stats.
 Identities = 256/588 (43%), Positives = 367/588 (62%), Gaps = 20/588 (3%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           L   RHS +HIMA+AVQ ++P  ++ IGP IE+GFYYDF+ +  F  ++L  IE KM+EI
Sbjct: 6   LQTARHSLSHIMAQAVQELFPGTRLGIGPAIENGFYYDFESDHKFVPEDLKAIEAKMKEI 65

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
           I    PF  + +   +A + F  K E +KVE++  +    ++++Y  G++ DLC+GPHV 
Sbjct: 66  IKAKQPFACKNMPKAEAVKFFSDKGEHFKVELINEL-EDGSISVYTNGDFVDLCKGPHVE 124

Query: 190 STGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKL 249
            TG++  F KL  +AGAYW+GD  RPML RIYG A+ T+ +L +Y+   EE+ KRDHRKL
Sbjct: 125 HTGKINNF-KLTHIAGAYWKGDEKRPMLQRIYGLAFETKDKLNEYIKQQEEAAKRDHRKL 183

Query: 250 AREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQ 307
             E+DLF I+ED G G+I  H KG  + + +  ++R + IK  Y+ + +P +   HLWQ+
Sbjct: 184 GIELDLFSISEDIGPGLILMHPKGGMLRKVVEDWIRDENIKHGYDLVYSPHIARLHLWQK 243

Query: 308 SGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGS 367
           SGH + Y  NMF     DD     + + LKPMNCP H+A++   L+SYR+LPVRLAE G+
Sbjct: 244 SGHANFYSENMFQPIEVDD-----QQYQLKPMNCPFHIAIYESHLRSYRDLPVRLAELGT 298

Query: 368 VYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKL 427
           VYR E SG +HGL+RVRGFTQDDAH+FCT EQM  E     N  + + K FGFEK  V+L
Sbjct: 299 VYRYERSGVVHGLLRVRGFTQDDAHIFCTPEQMNGEIEDCFNFAMLVMKTFGFEKFSVEL 358

Query: 428 STR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           ST     PE   G    W++A+N ++ VL       ++ +   V  GE AFYGPK +  +
Sbjct: 359 STWDETKPENYTGGKKDWEEAQNALESVLK------KNNVPFTVHAGEAAFYGPKIDIKV 412

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            DAIGR WQ  TIQ DFNLP +F   YV+    +  P+M+HRA+ GSIERF+G++IE++ 
Sbjct: 413 MDAIGRYWQLSTIQFDFNLPQKFELEYVSPEG-RKRPLMVHRALLGSIERFLGVLIEHYA 471

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  PLWL+P+Q  + T+T    ++A+++   +K   L  E D R E +  KIRE  ++KI
Sbjct: 472 GLFPLWLAPVQVKLLTLTDDQFDFAKDVVKQMKLAGLRAELDSRPEKLGLKIREAHVEKI 531

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           P  I+ G KEA  +++ +R       + +S+ D I  L +E+     +
Sbjct: 532 PYSIVIGAKEAENKTLTLRLRSGKNVEGLSVGDVIAKLKEEADTKSLK 579


>gi|314967879|gb|EFT11978.1| threonyl-tRNA synthetase [Propionibacterium acnes HL037PA1]
          Length = 689

 Score =  537 bits (1384), Expect = e-150,   Method: Composition-based stats.
 Identities = 234/674 (34%), Positives = 355/674 (52%), Gaps = 48/674 (7%)

Query: 4   DIKLTFPD-GSIK--NFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
            I +T    G+ +        TG D+  S      +  VA+ ++G + DL   + +G+ +
Sbjct: 7   SISITLHRSGTSRTQQVDTTTTGLDLFGS-----DRAVVAMRVDGNLVDLQRELHDGAEV 61

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           E +       L +IRHS  H+MA+AVQ ++PEV + IGP I +GFYYDF   +P + + L
Sbjct: 62  EPVEATSEDGLNIIRHSATHVMAQAVQQLYPEVNLGIGPFITNGFYYDFGNIEPVTPEVL 121

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK----------- 168
           +++EK+M+ I+  +  F+++  + E ARE  E   + YK+E++ +               
Sbjct: 122 SELEKRMKRIVKENQRFVRRVTTEESARE--ELADQPYKLELIGTKGKGAEGASVEVGGG 179

Query: 169 -----ENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
                +NV    +  W DLCRGPHV ST  +   F L K + AYW+GD     L RIYGT
Sbjct: 180 ELTIYDNVRRNGEVAWKDLCRGPHVPSTKYLANTFALTKFSAAYWKGDQANDQLQRIYGT 239

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISY 282
           AW +++ L  Y   ++E+E+RDHRKL  E+DLF   E+ G G++ +H KG  +   +  +
Sbjct: 240 AWASREGLAAYQQRIKEAERRDHRKLGAELDLFSFPEEIGPGLVVFHPKGAMLRHLIEEH 299

Query: 283 -MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD-------LRTF 334
            + R ++  +  ++TP++    L+  SGH   Y   MF     D+   +        + +
Sbjct: 300 VIARHMEAGFNFVHTPEITKGGLFHTSGHLPYYADTMFPPMLVDEERDEEGNVTRAGQEY 359

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
            LK MNCP H  +F    +SYRELP+R  E G  YR E SG +HGL R+RGF QDD+H +
Sbjct: 360 YLKAMNCPMHNLIFRSRGRSYRELPLRFFEMGHDYRYEKSGVVHGLTRMRGFAQDDSHTY 419

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP------EKRVGSDALWDDAENIM 448
           CT+EQ   E  K     +SI  DFG     ++LSTR       EK +GSD  W  A + +
Sbjct: 420 CTREQAPGEIKKQIEFFLSILADFGLNDFYLELSTRESDSAKKEKFIGSDEDWQVATDTL 479

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
             V  +        +      G  AFYGPK    ++DAIGR WQ  TIQ DFN P RF+ 
Sbjct: 480 DQVCRSTG------LQLVPDPGGAAFYGPKVSVQVRDAIGRTWQMSTIQYDFNQPERFDL 533

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYA 568
            Y  +      P+M+H A  GS+ERFIG++ E++ G  P+WLSP+Q  +  +  +  +Y 
Sbjct: 534 EYAAADGTHQRPIMLHSAKLGSVERFIGVLTEHYAGAFPVWLSPVQVRLVPVAEAFNDYV 593

Query: 569 QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
              A +L S  + +ETD  ++    KIR  S  K+P I+I G ++A   ++  R    + 
Sbjct: 594 TGFAEVLGSRGIRVETDLSSDRFGKKIRNASKDKVPFILIAGGEDAEAGAVSFRLRDGSQ 653

Query: 629 TQKVSLLDAIPILT 642
              V L +A+ I+ 
Sbjct: 654 VNGVVLDEAVRIIA 667


>gi|320528406|ref|ZP_08029568.1| threonyl-tRNA synthetase [Solobacterium moorei F0204]
 gi|320131320|gb|EFW23888.1| threonyl-tRNA synthetase [Solobacterium moorei F0204]
          Length = 591

 Score =  537 bits (1384), Expect = e-150,   Method: Composition-based stats.
 Identities = 230/602 (38%), Positives = 363/602 (60%), Gaps = 26/602 (4%)

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
             ++  +L  + HSCAH+MA+AV+ ++P+ +  +GP++E+GFYYD D  +     ++LA+
Sbjct: 3   NFKEDVALNTLNHSCAHLMAQAVKHLYPQAKFWVGPVVEEGFYYDIDLGDDVIRDEDLAK 62

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK+M++    D   ++Q ++ E+A E  + K + YK++++  +P   ++++Y QG++ D
Sbjct: 63  IEKEMKKCAKADKRIVRQEITREEALE--QFKDDEYKIDLINRMPEGTHISMYTQGDFTD 120

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH  ST   + F KL+K +GAYW+GD N  +L RIYG    TQ+EL  +L  LE++
Sbjct: 121 LCRGPHTESTKNCRYF-KLIKHSGAYWKGDKNNKVLQRIYGVCLPTQEELDSHLADLEDA 179

Query: 242 EKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQV 299
           ++RDHRKL ++M +F  ++  G G+  W   G  + + L  Y M +++   Y+ + TP V
Sbjct: 180 KQRDHRKLGKDMQIFMFSDIVGGGLPLWLPNGLTVRRLLSDYIMNKELARGYQHVLTPSV 239

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGH   Y+ +MF +   DD       F L+PMNCP H+ ++   L SYR+LP
Sbjct: 240 ASTKLYKISGHLAHYKDDMFPIMSRDDD-----EFVLRPMNCPEHMIIYKSQLHSYRDLP 294

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE  + +R E SG+L G+ R R FTQ+D+H+FCT+EQ+ +E   +  LI+ +YKDF 
Sbjct: 295 IRIAEIANDFRFEASGALTGIERSRAFTQNDSHIFCTEEQIASEIKAVTELILDVYKDFN 354

Query: 420 FEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
             +   +LS R     EK  G+D LW+ +E+ ++ VL  +       +      GE AFY
Sbjct: 355 LNQFEFRLSLRDKENTEKYFGNDDLWERSESELREVLKEMN------VPYYEAEGEAAFY 408

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  ++ A+G D    TIQ+D+ LP RF   YV +  EK  PV+IHRA+ GSI+RF+
Sbjct: 409 GPKIDVQVRSALGHDVTLSTIQLDYQLPERFELEYVANGGEKKRPVVIHRAILGSIDRFV 468

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             ++E  KG LPLWL+P QA+V  ++     EYA+++   L+   +  E D RNE + Y+
Sbjct: 469 AFLLEETKGILPLWLAPRQAVVIPVSPEAHGEYAKKVVEELRKIGVRTELDDRNEKLGYR 528

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE----SLPPDC 650
           IRE    K+PI ++ GD E     I +RR+GS    K+SL + +  +  E     L P+ 
Sbjct: 529 IREAQTNKLPIEVVVGDGEIENNGITLRRYGSRQETKMSLEEFLAAIKVEIDEKRLAPEV 588

Query: 651 QK 652
           QK
Sbjct: 589 QK 590


>gi|227549145|ref|ZP_03979194.1| threonyl-tRNA synthetase [Corynebacterium lipophiloflavum DSM
           44291]
 gi|227078786|gb|EEI16749.1| threonyl-tRNA synthetase [Corynebacterium lipophiloflavum DSM
           44291]
          Length = 884

 Score =  537 bits (1384), Expect = e-150,   Method: Composition-based stats.
 Identities = 239/660 (36%), Positives = 358/660 (54%), Gaps = 43/660 (6%)

Query: 16  NFPVHATGSDVAESIS-RSLAKKAVAVA--INGKVCDLSD-PVREGSIEIITPEDPRSLA 71
           N P           ++  +    AV      +G++ DLS  P  + +   +        +
Sbjct: 14  NVPAGTAVGAAMRELNYPNKGDDAVVCVQDADGELKDLSHIPDADATFMPVAANTELGRS 73

Query: 72  VIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIA 131
           VIRHS AH++A+AVQ+ +P  ++ IGP I+DGFYYDFD  +PF+ D+L  +EK+M++II 
Sbjct: 74  VIRHSAAHVLAQAVQAEFPGTKLGIGPAIDDGFYYDFDVAEPFTPDDLVTLEKRMKKIIK 133

Query: 132 RDSPFLK-QYLSHEKARELFESKKEAYKVEILESI----PAKENVTLYRQGE-------- 178
           +   F++  Y S E+A E  +   E YK+E+++      P  +  T    G+        
Sbjct: 134 QGQKFVRGVYQSVEEAAEDLK--DEPYKLELIQDKGNVDPDSDEATEVGAGDLTHYDNVN 191

Query: 179 -------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQEL 231
                  W DLCRGPHV +T  +  F        AYWRGD N   L RIYGTAW +++ L
Sbjct: 192 PRTGEVEWHDLCRGPHVPTTKYIPAFALTRSS-AAYWRGDQNNAGLQRIYGTAWESKERL 250

Query: 232 TQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKD 289
            ++L+ L E+EKRDHR+L  EMDLF   ++ GSG+  +H  G  I   +  + RR  I+ 
Sbjct: 251 DEHLHMLREAEKRDHRRLGNEMDLFSFPDELGSGLPVFHPDGGIIRLAMEDHSRRRHIEA 310

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL-------RTFALKPMNCP 342
            Y  +NTP V    L+ +SGH D Y   MF     D  I D        + + +KPMNCP
Sbjct: 311 GYSFVNTPHVTKGSLFSKSGHLDWYADGMFPPMKLDGEIDDDGNVVKQPQDYYVKPMNCP 370

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN 402
            H  +F+   +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDDAH++CT++Q+  
Sbjct: 371 MHNLIFDSRGRSYRELPLRLFEFGTVYRYEKSGVIHGLTRARGFTQDDAHIYCTEDQLEA 430

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDTIKNSSQD 461
           E   +   IIS+ KD+G     ++LST+  +  +G D +W  + +I++ V +      + 
Sbjct: 431 ELTSVLEFIISLLKDYGLNDFYLELSTKDPQKYIGDDEIWQRSTDILQSVAE------KS 484

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
            +         AFYGPK     +DAIGR WQ  T+Q+DFNLP RF+  Y      K  PV
Sbjct: 485 GLELVPDPAGAAFYGPKISVQARDAIGRTWQMSTVQLDFNLPERFDLTYTAPDGTKKRPV 544

Query: 522 MIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLS 581
           MIHRA+FGSIERF G+++E++ G  P WL+P Q +   +      +   +   L+   + 
Sbjct: 545 MIHRALFGSIERFFGVLLEHYAGAFPAWLAPHQVVGIPVADDFAGHLDSVTQKLRERGIR 604

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            E D  ++ +  KIR H+  K+P +++ G ++    ++  R    T    V + +A+ I+
Sbjct: 605 AEVDHSDDRMQKKIRNHTTSKVPFMLLAGARDVEADAVSFRFLDGTQVNGVPVAEAVDII 664


>gi|298252757|ref|ZP_06976551.1| threonyl-tRNA synthetase [Gardnerella vaginalis 5-1]
 gi|297533121|gb|EFH72005.1| threonyl-tRNA synthetase [Gardnerella vaginalis 5-1]
          Length = 660

 Score =  537 bits (1383), Expect = e-150,   Method: Composition-based stats.
 Identities = 245/630 (38%), Positives = 363/630 (57%), Gaps = 37/630 (5%)

Query: 36  KKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           K  +AV +NG++ DL   + +G ++E +  +    +A++RHS  H+MA+AVQ I P+ ++
Sbjct: 15  KNIIAVRLNGELRDLYTSLHDGDTVESVALDSEDGIAIMRHSATHVMAQAVQEIRPDAKL 74

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            +GP+I+DGFYYDFD + PF+ D+L QIEK MQ II     F ++ ++ ++ARE  E   
Sbjct: 75  GVGPVIKDGFYYDFDVDTPFTPDDLKQIEKHMQRIIKESQSFRRRVVTEDEARE--EEAN 132

Query: 155 EAYKVEILESIPA-----------KENVTLY----RQGE--WFDLCRGPHVRSTGQVKKF 197
           + YK+E++    A           K  +++Y    R+G   W DLCRGPH+ +T  +K F
Sbjct: 133 QPYKLELIGDKEAALDPAASGEISKHELSMYDNVDREGNKVWSDLCRGPHLPNTRYIKAF 192

Query: 198 FKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFH 257
            KL +VA AYWRG    PML RIYGTAW +++EL  Y   +EE+ KRDHRKL +EMDLF 
Sbjct: 193 -KLERVAAAYWRGSEQNPMLQRIYGTAWPSKEELKAYTTRMEEAAKRDHRKLGQEMDLFS 251

Query: 258 IAED-GSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYR 315
             ++ G G+  +H KG  I   +  Y R + +   Y  + TP +    L++ SGH   Y+
Sbjct: 252 FPDEIGPGLAVFHPKGAAIINAMEDYSREQHRKHHYSFVQTPHITKGGLYETSGHLQWYK 311

Query: 316 ANMFAVKCADDT-------IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV 368
             M+     D+         +    + LKPMNCP H  +F    +SYRELP+RL EFG+V
Sbjct: 312 DGMYPPMKLDEERDENGNVTRQGADYYLKPMNCPMHNLIFKSRQRSYRELPLRLFEFGTV 371

Query: 369 YRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLS 428
           YR E SG +HGL RVRG TQDD+H++CT+EQM +E   + N ++ + KDFG     ++LS
Sbjct: 372 YRYEKSGVVHGLTRVRGLTQDDSHIYCTREQMRDELKSLLNFVLGLLKDFGLNDFYLELS 431

Query: 429 TRPEK-RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAI 487
           T+ E   VGSD +W++A N +  V        +  +      G  AFYGPK     +DAI
Sbjct: 432 TKDEHKFVGSDEIWEEATNTLAEVAK------ESGLELVDDPGGAAFYGPKISVQARDAI 485

Query: 488 GRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           GR WQ  TIQ+DFNLP RF   Y+ +      PVMIHRA+FGSIERF  I++E++ G  P
Sbjct: 486 GRTWQVSTIQLDFNLPERFKLEYIAADGSHQRPVMIHRALFGSIERFFAILLEHYAGAFP 545

Query: 548 LWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIII 607
            WL+P+Q     +      + Q++ + L+ + +  E D  ++    KIR  S  K+P  +
Sbjct: 546 AWLAPVQVTGVPVADEFAPHLQKLISDLEENMVRCEMDNSDDRFGKKIRNASKSKVPFTL 605

Query: 608 ICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
           I G+++ +  ++  R    +    V +  A
Sbjct: 606 IAGEEDVNNNAVSFRFRDGSQLNGVPVSQA 635


>gi|311742315|ref|ZP_07716124.1| threonine--tRNA ligase [Aeromicrobium marinum DSM 15272]
 gi|311313943|gb|EFQ83851.1| threonine--tRNA ligase [Aeromicrobium marinum DSM 15272]
          Length = 661

 Score =  537 bits (1383), Expect = e-150,   Method: Composition-based stats.
 Identities = 229/633 (36%), Positives = 349/633 (55%), Gaps = 41/633 (6%)

Query: 37  KAVAVAINGKVCDLSDPVREGSI-EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVA 95
             VA  ++G++ DLS  +  G + E +  + P  L ++RHS AH+MA+AVQ ++PE ++ 
Sbjct: 34  DVVAARVDGELRDLSRELEAGDVVEAVAIDSPDGLDILRHSTAHVMAQAVQELFPEAKLG 93

Query: 96  IGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKE 155
           IGP I DGFYYDFD  +PF  ++L +IE +M++II     F ++ ++ ++AR   E   E
Sbjct: 94  IGPPITDGFYYDFDVAEPFVPEDLVKIESRMRKIIKEGQKFDRREVTDDQAR--VELADE 151

Query: 156 AYKVEIL-------------------ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKK 196
            YK+E++                     +   +N+       W DLCRGPH+ +T ++  
Sbjct: 152 PYKLELIGLKSTAGDVAEGAGVEVGEGGLTIYDNLKRDGSVAWGDLCRGPHLPTTKRIPA 211

Query: 197 FFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLF 256
           F  +   A AYWRGD     L R+YGTAW T++ L  +L+ +EE+++RDHR+L  E+DLF
Sbjct: 212 FTLMRS-AAAYWRGDEKNKQLQRLYGTAWPTKEALEAHLFRIEEAQRRDHRRLGTELDLF 270

Query: 257 HIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSY 314
              ++ GSG+  +H +G  I + +  Y+RR  I++ +E + TP +  + L+  SGH   Y
Sbjct: 271 SFPDEIGSGLPVFHPRGGVIKREMEDYVRRRHIEEGFEYVGTPHIAKEGLFHTSGHLPYY 330

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
              MF          D   + LK MNCP H  +F    +SYRELP+R  EFG VYRNE S
Sbjct: 331 GEGMFPALDV-----DGSDYRLKAMNCPMHNLIFRSRGRSYRELPLRFFEFGHVYRNEKS 385

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP--- 431
           G +HGL RVRGF QDD+H + T EQ   E   +   ++S+ +DFG +   ++LSTR    
Sbjct: 386 GVIHGLTRVRGFAQDDSHSYVTPEQAPGEIRHLLQFVLSLLRDFGLDDFYLELSTRDASK 445

Query: 432 EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDW 491
           +K +GSD  W  A  +++ V        +  +      G  A+YGPK     +DAIGR W
Sbjct: 446 DKFIGSDEDWATATKVLEDV------CLESGLELVPDPGGAAYYGPKVSVQARDAIGRSW 499

Query: 492 QCGTIQVDFNLP--SRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW 549
           Q  TIQ DFN P   RFN  YV +   +  PVMIH A FGSIERF+G+++E++ G  P W
Sbjct: 500 QMSTIQYDFNQPSPERFNLEYVAADGSRRQPVMIHSAKFGSIERFMGVLVEHYAGAFPPW 559

Query: 550 LSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIIC 609
           L+P+Q +   +     +Y   +   L++  +  E D  +E +  KIR    +K+P +++ 
Sbjct: 560 LAPVQVVGIPVAERHADYLVNLTARLRALGIRAEVDHSDERMQKKIRNAQTQKVPFMLLA 619

Query: 610 GDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           GD +    ++  R         V+L +AI  + 
Sbjct: 620 GDNDIDGGAVSFRYRNGEQDNGVALDEAIERIV 652


>gi|270308068|ref|YP_003330126.1| threonyl-tRNA synthetase (thrS) [Dehalococcoides sp. VS]
 gi|270153960|gb|ACZ61798.1| threonyl-tRNA synthetase (thrS) [Dehalococcoides sp. VS]
          Length = 582

 Score =  537 bits (1383), Expect = e-150,   Method: Composition-based stats.
 Identities = 248/574 (43%), Positives = 353/574 (61%), Gaps = 18/574 (3%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           L ++RHS AHIMAEAV S++PE ++ IGP I+ GFYYDFD  +  + ++L +IE +M ++
Sbjct: 14  LEIMRHSAAHIMAEAVLSMFPEAKLGIGPAIDTGFYYDFDLPRTLTPEDLPEIETRMNQL 73

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
           +  + PF ++ +S ++AR+L     + YK+E+L  IP  E V++YRQG + DLCRGPHV 
Sbjct: 74  VKANLPFRREEMSKDEARKL--FADQPYKLELLNDIP-DETVSIYRQGNFCDLCRGPHVN 130

Query: 190 STGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKL 249
            T +VK F KL+ +AGAYWRGD  RPML RIYG A+  +  L  YL  +EE+ KRDHRKL
Sbjct: 131 YTSKVKAF-KLLSIAGAYWRGDEKRPMLQRIYGAAFLDKASLADYLNMIEEAAKRDHRKL 189

Query: 250 AREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQ 307
            +E++LF + ++ G G++ W   G  I   +  + +   +K  Y  + TP +    LW+ 
Sbjct: 190 GKELELFSLHQEIGGGLVNWLPNGATIRHLIEEFWKKEHLKRGYNLVYTPHIAKVDLWKT 249

Query: 308 SGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGS 367
           SGHW  YR NM++         D   + LKPMNC  H+ +F +  +SY+ELP+R+AE G+
Sbjct: 250 SGHWGFYRENMYSPMDI-----DGEEYVLKPMNCVYHILMFKNRTRSYKELPIRMAELGT 304

Query: 368 VYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKL 427
           VYR E SG LHGL RVRGFTQDDAH+FC  EQ+  E +K+ +L   +   FGF K  V L
Sbjct: 305 VYRYERSGVLHGLSRVRGFTQDDAHIFCLYEQLEKEVVKVLDLAKFMIDTFGFAKYKVML 364

Query: 428 STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAI 487
           STRPEK VG  A W+ A +I+   L+       + I+  V  GEG FYGPK +   +DA+
Sbjct: 365 STRPEKYVGELAKWEYATDILAKALEA------NGISYQVDPGEGVFYGPKIDIKFEDAL 418

Query: 488 GRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           GR WQ  TIQVDF LP RF    V    +     M+HR V GS+ERF+  + E + G  P
Sbjct: 419 GRAWQGPTIQVDFQLPERFEVSVVGEDGKDQPVAMVHRTVLGSMERFMSCLTEQYGGAFP 478

Query: 548 LWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIII 607
           +WLSP Q ++  I     E+A+++A  L+   + +E D R+ET+N KIR+  + KIP ++
Sbjct: 479 VWLSPKQVMIIPIADRHSEFAEKLACELREEEVRVEVDNRSETMNQKIRQAQLAKIPYML 538

Query: 608 ICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           + GDKE    SI +R     + Q +   +   +L
Sbjct: 539 VVGDKEIETGSIALRSR-IGSQQVMPFAEFKSML 571


>gi|268678723|ref|YP_003303154.1| threonyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
 gi|268616754|gb|ACZ11119.1| threonyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
          Length = 605

 Score =  537 bits (1383), Expect = e-150,   Method: Composition-based stats.
 Identities = 243/612 (39%), Positives = 369/612 (60%), Gaps = 22/612 (3%)

Query: 37  KAVAVAINGKVCDLSDPVREGSI---EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQ 93
             +A      + D    +        +I+      +L VIRHSCAH+MA+A+++++ + Q
Sbjct: 4   DVIAYKEGSTLIDTQTALASSKTYEDKILFNNSKDALEVIRHSCAHLMAQAIKALYKDAQ 63

Query: 94  VAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESK 153
             +GP+IEDGFYYDF   +     +L +IEKKM E+     P  K Y +  +A +     
Sbjct: 64  FFVGPVIEDGFYYDFRVNEKIGDADLKEIEKKMAELANAKLPIEKIYTTKAEALK--HFA 121

Query: 154 KEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSN 213
            +  K E++  IP  E V++Y+QG++ DLCRGPHV +T +  +FFKL+KVAGAY  GD  
Sbjct: 122 HDDLKQEVMLRIPDGE-VSIYKQGDFEDLCRGPHVPNT-KYLRFFKLIKVAGAYLGGDEK 179

Query: 214 RPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKG 272
           R ML+RIYG A+  ++ L  Y+  +EE++KRDHRK+  E+ LF   ++   G+  W  +G
Sbjct: 180 REMLTRIYGIAFADKESLKDYVTMIEEAKKRDHRKIGNELKLFTFDDEVGAGLPIWLPQG 239

Query: 273 WKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
            K+   L   +     K  Y+ +  P++L    W+ SGH+ +Y  NM+       T+ D 
Sbjct: 240 GKLRAKLEKLLFTAHRKRGYQPVRGPEILKSDAWKISGHYQNYGENMYF------TVIDE 293

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
             + +KPMNC GH+ VF   ++SYR+LP++  E+G V+R+E SG LHGL RVR FTQDDA
Sbjct: 294 AEYGIKPMNCLGHIKVFQSEVRSYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFTQDDA 353

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
           H+FCT +Q+    L+I + + SI K FGF   M ++STRPEK +G +  W+ A   +K  
Sbjct: 354 HIFCTPDQIKENVLEILSFVDSIMKTFGFHYEM-EISTRPEKSIGDERYWEAATQGLKNA 412

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
           LD      ++ I  G+  G GAFYGPK +  + DA+ R WQCGTIQVDFNLP RF+  YV
Sbjct: 413 LD------ENGITYGIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDFNLPERFDISYV 466

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
           ++++E   PVM+HRA+ GS ERFIGI+IE+  G  P +L+P Q ++  I+ + +EYA+ +
Sbjct: 467 DANNEHARPVMLHRAILGSFERFIGILIEHTSGEFPFFLAPTQVVIVPISDAHLEYAKSV 526

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
           AN L +  + +E   +NE++N +IR     ++P+I++ GD E   +S+ +R     T   
Sbjct: 527 ANALMAEEIDVEVSSKNESLNKRIRNAETMRVPMILVIGDAEVENQSVAVRDRRERTQYN 586

Query: 632 VSLLDAIPILTK 643
           +S ++ I  L +
Sbjct: 587 LSKVELIKTLKE 598


>gi|88607718|ref|YP_505783.1| threonyl-tRNA synthetase [Anaplasma phagocytophilum HZ]
 gi|88598781|gb|ABD44251.1| threonyl-tRNA synthetase [Anaplasma phagocytophilum HZ]
          Length = 615

 Score =  537 bits (1383), Expect = e-150,   Method: Composition-based stats.
 Identities = 265/615 (43%), Positives = 396/615 (64%), Gaps = 15/615 (2%)

Query: 30  ISRSLAKKAVAVAINGKVCDLSDPVREGSI-EIITPEDPRSLAVIRHSCAHIMAEAVQSI 88
           I   + +  +AV I+G+VCDL+  +   ++   +  +    + ++R S A I A AV S+
Sbjct: 5   IFSDIVESVIAVYIDGEVCDLASTIAASAVVNPVLIDCEEGINILRKSTAFITAMAVSSV 64

Query: 89  WPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE 148
            P +++A+     DGFY DFD E   S      IEKK++EI+ +D  F+++  S ++A  
Sbjct: 65  VPNMKLAVCTETSDGFYLDFDSETKLSEKSFEDIEKKIEEIVRKDEKFVRETWSKKEAIT 124

Query: 149 LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYW 208
            FE+  E Y++EILE    +EN+ +YR G        P V ST  +    KL K++G YW
Sbjct: 125 FFENNSETYQLEILEQ-NTQENIIVYRCGSHIFQNHSPLVPSTKYIG-ALKLTKLSGVYW 182

Query: 209 RGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFW 268
            GDS   ML RI G     +++L  Y   LEE+E+RDHRK+A++++ FHI  +  G +FW
Sbjct: 183 LGDSKNKMLQRISGVVQENKEKLDAYFKLLEEAERRDHRKIAKDLEWFHIQNEALGQVFW 242

Query: 269 HRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
           H KGW +++T+  Y+R+K+++  Y EI TP +LD+ LW++SGHW+ +R NMF V   +  
Sbjct: 243 HDKGWTLYRTIEEYLRKKLRENGYTEIKTPIMLDRKLWEKSGHWEKFRENMFIVSDQNS- 301

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
               +  A+KPMNCP HV +F    +SY++LP+R+AEFG  +RNEPSGSL+GLMRVRGFT
Sbjct: 302 ----QELAIKPMNCPCHVQIFKSKTRSYKDLPIRMAEFGMCHRNEPSGSLYGLMRVRGFT 357

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENI 447
           QDDAH+FCT +Q+ +E  K + L++ +Y DFGF+ I VKLS RPE+R+GSD +WD AE  
Sbjct: 358 QDDAHIFCTHDQIRDEVRKFYKLLVEVYNDFGFKNIDVKLSDRPEERIGSDEMWDMAERS 417

Query: 448 MKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFN 507
           +   +D       + +   +  G+GAFYGPK E+ LKDA+GR+WQCGTIQ+DF LPSR  
Sbjct: 418 LMDSMDD------EGVKYTINKGDGAFYGPKLEFTLKDALGRNWQCGTIQLDFVLPSRLG 471

Query: 508 AFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEY 567
           A+YV S   K HPVMIHRA+ G++ERFIGI+IE++ GNLP WL+P+Q  + T+ S+A+EY
Sbjct: 472 AYYVGSDGNKHHPVMIHRAILGTLERFIGILIESYAGNLPAWLAPVQLEILTVNSNALEY 531

Query: 568 AQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGST 627
           A  +AN  + H++ +E +   E+I  KIR+    KIP++ + G  E ++ ++ +R +G++
Sbjct: 532 ATTLANKAREHNIRVELNSGEESIGQKIRKSIFNKIPVLWVVGSAETADCTVSVRHYGTS 591

Query: 628 TTQKVSLLDAIPILT 642
               +    A+  L 
Sbjct: 592 NACSMEADKALKTLV 606


>gi|225560803|gb|EEH09084.1| threonyl-tRNA synthetase [Ajellomyces capsulatus G186AR]
          Length = 750

 Score =  537 bits (1382), Expect = e-150,   Method: Composition-based stats.
 Identities = 225/694 (32%), Positives = 361/694 (52%), Gaps = 71/694 (10%)

Query: 4   DIKLTFPDG-----SIKNFPVHATGSDVAESISRSLAKKAVAVAING-KVCDLSDPVR-E 56
           DI +T   G     +I       T       I + ++   V   ++G ++ DL  P+  +
Sbjct: 61  DINITIDIGDSNPSTIIGKAWETTPGSFLRDIPKEISSTVVIAKLDGKELWDLDRPLERD 120

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE--QPF 114
             +  +  +      V  HS AH++ EA +  +    ++ GP    GF+YD   E     
Sbjct: 121 CRVTFLPFDSIEGREVFWHSSAHVLGEACECYY-GCLLSHGPPTPQGFFYDMALEPGHVV 179

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
              +   ++ K   I     PF +  +S    +++F   K  YK+  + ++   E+ T+Y
Sbjct: 180 KESDWPALDTKAARIFKEKQPFDRLEVSKSDLKKMFAYSK--YKLHYINNLVEGESSTVY 237

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
           R G   DLCRGPH+++TG++K   K+M+ + AY+ GD +   L RI G A+  ++++ ++
Sbjct: 238 RCGTLVDLCRGPHIQNTGKIKI-MKIMQNSAAYFLGDQSNDALQRIRGVAFPDKKQMQEH 296

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEE 293
           L FLEE+EKR+H ++ ++ DLF   E   G  F    G KIF  L + +R + +   Y+E
Sbjct: 297 LKFLEEAEKRNHLRIGKDQDLFFFDEVSPGCPFLLPNGTKIFNALQALLRSEYRKRGYQE 356

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           + +P + D  +W+QSGHW  Y+ +MF +        + RT+ALKPMNCPGH  +F H  +
Sbjct: 357 VQSPNMYDVGIWRQSGHWQHYKDDMFKL------DIEKRTWALKPMNCPGHAIMFGHRER 410

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYRELP+R+A+FG ++RNE SG+LHGL RVR F QDD H+FC ++Q+  E   + + + +
Sbjct: 411 SYRELPLRIADFGVLHRNEASGALHGLTRVRKFQQDDTHIFCAEDQIMQEIDGLFDFLRA 470

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           IY  FGF    +KLSTRPEK +G    W++AE+ ++  +   K +     +  V  G+GA
Sbjct: 471 IYGLFGF-SFKLKLSTRPEKYMGKLETWNNAEDQLRAAMTKFKGN-----DWEVDEGDGA 524

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS------------------ 515
           FYGPK +  ++DA+ R++QC TIQ+D+ +P  F   Y+   +                  
Sbjct: 525 FYGPKIDVTIQDALKREFQCATIQLDYQMPVNFKLEYMTGETGAKAKPEEKSAGAPAAKT 584

Query: 516 -----------------------EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
                                   +  PV+IHRA+ GS ERF GI+IE+F G  P WLSP
Sbjct: 585 ADKPAGDAAKPDVPPTNSDEPGPGRARPVVIHRAIIGSFERFFGIIIEHFGGKWPFWLSP 644

Query: 553 IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
            Q ++  +  +  +Y +E+  +LK   L+++ D    T+  KIR   I +   I + G +
Sbjct: 645 RQILIVPVMPAVNDYVEELQRILKEDKLNVDIDISGNTMQKKIRTGQIAQYNFIFVVGAE 704

Query: 613 EASERSIGIRRFGSTTTQK----VSLLDAIPILT 642
           E S R++ IR     ++Q     V L +A   L 
Sbjct: 705 EKSTRTVNIRNRDDPSSQAKGSLVPLEEARAKLR 738


>gi|291571004|dbj|BAI93276.1| threonyl-tRNA synthetase [Arthrospira platensis NIES-39]
          Length = 604

 Score =  537 bits (1382), Expect = e-150,   Method: Composition-based stats.
 Identities = 237/593 (39%), Positives = 356/593 (60%), Gaps = 20/593 (3%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSD 117
            I +        L  IRH+ +H+MA AVQ ++P+ QV IGP IE+GFYYDFD  +PF+  
Sbjct: 15  KIHLPKTSQSDQLKRIRHTTSHVMAMAVQKLFPKAQVTIGPWIENGFYYDFDSPEPFTEQ 74

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +L  I+K+M +I+ R  P +++ +S E+A+   E+  E YK+EIL  +   E +T+Y  G
Sbjct: 75  DLKAIKKEMVKILKRKLPVIREEVSREEAQRRIETLGEPYKLEILADL--TEPITIYHLG 132

Query: 178 E-WFDLCRGPHVRSTGQVKK-FFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
           + W+DLC GPHV +TG +     +L  VAGAYWRGD  +  L RIYGTAW T ++L +Y 
Sbjct: 133 DQWWDLCAGPHVETTGDINPKAIELESVAGAYWRGDETKAQLQRIYGTAWETPEQLAEYK 192

Query: 236 YFLEESEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEE 293
              EE+ +RDHR+L +E+ LF  + + G G+  W  KG  +  TL  ++ R +++  Y+ 
Sbjct: 193 RRKEEALRRDHRRLGKELGLFIFSDQVGPGLPLWTPKGTILRTTLEDFLKREQVRRGYQP 252

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           + TP +   +L++ SGHW  YR ++F +        +   F LK MNCP HV ++   L+
Sbjct: 253 VVTPHLGRVNLFKTSGHWQKYREDLFPMMGE----SEDEGFVLKAMNCPFHVQIYKSSLR 308

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYRELP+RLAEFG+VYR E SG L GL RVRGFTQDDAH+F T EQ+ +E LK+ +LI S
Sbjct: 309 SYRELPIRLAEFGTVYRYEQSGELGGLTRVRGFTQDDAHLFVTPEQLDDEFLKVVDLIQS 368

Query: 414 IYKDF----GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL 469
           + K       F+  +       +K +GSD  W+ AEN ++  ++T+       +N    +
Sbjct: 369 VLKKLKLDQSFKARLSFRDPNSDKYIGSDQAWEKAENAIRRAVETLG------MNYFEGI 422

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG 529
           GE AFYGPK ++I++DA+ R+WQ GT+QVD+NLP RF+  YV     +  PVMIHRA FG
Sbjct: 423 GEAAFYGPKLDFIVQDALEREWQLGTVQVDYNLPERFDLEYVAEDGTRQRPVMIHRAPFG 482

Query: 530 SIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE 589
           S+ER IGI+IE + G+ PLWL+P+   +  ++   + + + +A   +S  +  E D  ++
Sbjct: 483 SLERLIGILIEEYTGDFPLWLAPVMVRLLPVSDEFLPFVESVAEKWRSLDIRAEADHSHD 542

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +   IR     K+P++ + G KE    S+ IR         +++ +    L 
Sbjct: 543 RLGKMIRNAEKAKVPVMAVVGAKEVESNSLSIRTRALGELGTLTVAETQSRLQ 595


>gi|327330301|gb|EGE72050.1| threonine--tRNA ligase [Propionibacterium acnes HL097PA1]
          Length = 689

 Score =  537 bits (1382), Expect = e-150,   Method: Composition-based stats.
 Identities = 233/674 (34%), Positives = 354/674 (52%), Gaps = 48/674 (7%)

Query: 4   DIKLTFPD-GSIK--NFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
            I +T    G+ +        TG D+  S      +  VA+ ++G + DL   + +G+ +
Sbjct: 7   SISITLHRSGTSRTQQVDTTTTGLDLFGS-----DRAVVAMRVDGNLVDLQRELHDGAEV 61

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           E +       L +IRHS  H+MA+AVQ ++PEV + IGP I DGFYYDF   +P + + L
Sbjct: 62  EPVEATSEDGLNIIRHSATHVMAQAVQQLYPEVNLGIGPFITDGFYYDFGNIEPVTPEVL 121

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK----------- 168
           ++ EK+M+ I+  +  F+++  + E ARE  E   + YK+E++ +               
Sbjct: 122 SEFEKRMKRIVKENQRFVRRVTTEESARE--ELADQPYKLELIGTKGKGAEGASVEVGGG 179

Query: 169 -----ENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
                +NV    +  W DLCRGPHV ST  +   F L K + AYW+GD     L RIYGT
Sbjct: 180 ELTIYDNVRRNGEVAWKDLCRGPHVPSTKYLANAFALTKFSAAYWKGDQANDQLQRIYGT 239

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISY 282
           AW ++++L  Y   ++E+E+RDHRKL  E+DLF   E+ G G++ +H KG  +   +  +
Sbjct: 240 AWASREDLAAYQQRIKEAERRDHRKLGAELDLFSFPEEIGPGLVVFHPKGAMLRHLIEEH 299

Query: 283 -MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD-------LRTF 334
            + R ++  +  ++TP++    L+  SGH   Y   MF     D+   +        + +
Sbjct: 300 VIARHMEAGFYFVHTPEITKGGLFHTSGHLPYYAGTMFPPMLVDEERDEEGNVIRAGQEY 359

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
            LK MNCP H  +F    +SYRELP+R  E G  YR E SG +HGL R+RGF QDD+H +
Sbjct: 360 YLKAMNCPMHNLIFRSRGRSYRELPLRFFEMGHDYRYEKSGVVHGLTRMRGFAQDDSHTY 419

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK------RVGSDALWDDAENIM 448
           CT+EQ   E  K     +SI  DFG     ++LSTR          +GSD  W  A + +
Sbjct: 420 CTREQAPGEIKKQIEFFLSILADFGLNDFYLELSTRESNSAKEEKFIGSDEDWQVATDTL 479

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
             V  +        +      G  AFYGPK    ++DAIGR WQ  TIQ DFN P RF+ 
Sbjct: 480 DQVCRSTG------LQLVPDPGGAAFYGPKVSVQVRDAIGRTWQMSTIQYDFNQPERFDL 533

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYA 568
            Y  +      P+M+H A  GS+ERFIG++ E++    P+WLSP+Q  +  +  +  +Y 
Sbjct: 534 EYAAADGTHQRPIMLHSAKLGSVERFIGVLTEHYAAAFPVWLSPVQVRLVPVAEAFNDYV 593

Query: 569 QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
            E A +L S  + +ETD  ++    KIR  S +K+P I+I G ++A   ++  R    + 
Sbjct: 594 TEFAEVLGSRGIRVETDLSSDRFGKKIRNASKEKVPFILIAGGEDAEAGAVSFRLRDGSQ 653

Query: 629 TQKVSLLDAIPILT 642
              V L +A+ I+ 
Sbjct: 654 VNGVVLDEAVRIIA 667


>gi|27904622|ref|NP_777748.1| threonyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
 gi|29839437|sp|P59554|SYT_BUCBP RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|27904019|gb|AAO26853.1| threonyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
          Length = 643

 Score =  537 bits (1382), Expect = e-150,   Method: Composition-based stats.
 Identities = 253/648 (39%), Positives = 403/648 (62%), Gaps = 20/648 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI- 59
           MP    + F DG+ + +P   +  D+ + +S +  +  +   +NG   D +  V   SI 
Sbjct: 1   MP---TIKFIDGTCRVYPGSISVLDILKDVSPNSVQDFMFGCVNGISVDRNAIVTNDSIV 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           + +   D  +L +IR+SC  ++ +AV+ +WP  ++    ++E+GF+ D + +  F+   L
Sbjct: 58  KFVYKTDQSTLDIIRYSCICLLGKAVKKLWPSSKIGESDVLENGFFCDIEVDFSFNETSL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIP--AKENVTLYRQG 177
             +E  M+++I +      +  S +KA  +F+++ E YK+ +L+ +   + + V+L    
Sbjct: 118 HLLEACMRQMINKKYKIYTKTFSLKKASTIFKNRNETYKLFLLDRLVNFSNQVVSLCFHE 177

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           E+ D+ +   V +    + F    K +G YW+G     +L RIYGT+W T+ +L ++L  
Sbjct: 178 EYIDIQKKISVPNIFLCRNFRLQ-KFSGVYWKGKRENKVLQRIYGTSWITRIQLEKHLDN 236

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINT 296
           +++ + RDHRK+++ +DL+HI ED  G+IFWHR GW +FQ L   +R K++  +Y+E+ T
Sbjct: 237 VKKLDSRDHRKISKILDLYHIQEDLPGMIFWHRNGWIVFQELKKLIRVKLRKYNYQEVKT 296

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P ++++ +W+ SGH D+Y+ +MF V  ++        + +KPMNCPGHV +FNH ++SYR
Sbjct: 297 PVMMNKKIWKDSGHLDNYKESMFMVCSSNF------EYGIKPMNCPGHVQIFNHVVRSYR 350

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +LP+R++EFGS +RNEPSG+LHGLMR+R FTQDDAH+FC ++Q+ +E      ++  IYK
Sbjct: 351 DLPIRISEFGSCHRNEPSGALHGLMRIRNFTQDDAHIFCREDQICSEVSNCIRMVYEIYK 410

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
            FGF+KI+V+LSTRP+ R+G+D +WD AEN +   L       + +I      GEGAFYG
Sbjct: 411 IFGFKKILVRLSTRPKNRIGNDNIWDKAENDLATSL------RESKIEFEYQHGEGAFYG 464

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK E  L D++GR WQC TIQ+DF LP    AFY++ ++E+  P+++HRAV GSIERFIG
Sbjct: 465 PKIELSLFDSLGRVWQCATIQLDFCLPINLKAFYIDHNNERKVPIIVHRAVLGSIERFIG 524

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           I+IE + GN P WL+PIQ ++  + S+ ++Y + +     +  +  E D RNETI+YKIR
Sbjct: 525 ILIEEYIGNFPTWLAPIQVVLANVNSNHLQYIKLLYKEFYALGIRSEIDSRNETISYKIR 584

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           EH  +KIP IIICGDKE    +I +R         + +   I  L KE
Sbjct: 585 EHIARKIPYIIICGDKEVKNNTITLRTRSGKNFYCIDVQFFISKLCKE 632


>gi|242046134|ref|XP_002460938.1| hypothetical protein SORBIDRAFT_02g037830 [Sorghum bicolor]
 gi|241924315|gb|EER97459.1| hypothetical protein SORBIDRAFT_02g037830 [Sorghum bicolor]
          Length = 648

 Score =  537 bits (1382), Expect = e-150,   Method: Composition-based stats.
 Identities = 254/592 (42%), Positives = 365/592 (61%), Gaps = 35/592 (5%)

Query: 55  REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPF 114
            E  + + T E   +L  IRH+                 V IGP IE+GFYYDFD E P 
Sbjct: 79  EEERVVLPTNESSETLLRIRHT-----------------VTIGPWIENGFYYDFDME-PL 120

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
           +  +L +I+K+M  II ++ P +++ +S E+A++  E+  E YK+EILESI   E +T+Y
Sbjct: 121 TDKDLKKIKKEMDRIIRQNLPLVREEVSREEAQKRIEALNEPYKLEILESIKE-EPITIY 179

Query: 175 RQGE-WFDLCRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELT 232
             GE W+DLC GPHV STG++ +K  +L  VAGAYWRGD    ML RIYGTAW  + +L 
Sbjct: 180 HIGEEWWDLCAGPHVESTGKINRKAVELESVAGAYWRGDEKNQMLQRIYGTAWENEDQLK 239

Query: 233 QYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDD 290
            Y++F EE+++RDHR+L +++DLF I +D G G++FWH KG  I   L    ++  ++  
Sbjct: 240 AYIHFKEEAKRRDHRRLGQDLDLFSIQDDAGGGLVFWHPKGAIIRHILEDSWKQIHLQHG 299

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH 350
           Y+ + TP V    LW+ SGH D Y+ +M+     +D +     + L+PMNCP H+ V+  
Sbjct: 300 YDLLYTPHVAKADLWKISGHIDFYKESMYNQMDVEDEM-----YQLRPMNCPYHILVYKR 354

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
            L SYR+ P+R+AE G+VYR E SGSLHGL RVRGFTQDDAH+FC ++Q+ +E   + +L
Sbjct: 355 KLHSYRDFPIRVAELGTVYRYELSGSLHGLFRVRGFTQDDAHIFCLEDQIKDEIRGVLDL 414

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
              I   FGF    + LSTRPEK VG+D +W+ A   +K  LD             V  G
Sbjct: 415 TEQILGQFGFRYYEINLSTRPEKSVGTDDIWEKATIALKNALDD------KGWEYKVDEG 468

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
            GAFYGPK +  ++DA+GR WQC T+QVDFNLP RF+  YV+S+SEK  P+MIHRA+ GS
Sbjct: 469 GGAFYGPKIDLKIEDALGRKWQCSTVQVDFNLPERFDITYVDSNSEKKRPIMIHRAILGS 528

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
           +ERF G++IE++ G+ PLWL+P QA +  +T + ++Y  E+A+ LKS  L +E     E 
Sbjct: 529 LERFFGVLIEHYAGDFPLWLAPTQARILPVTDNELQYCNEVASELKSRGLRVEV-CHGER 587

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +   IR    +K+P++ + G KE   R++ IR   +     + + + I  L 
Sbjct: 588 LPKLIRNAETQKVPLMAVVGPKEVQARTLTIRSRHNGEIGTMPVDEFITRLQ 639


>gi|120403545|ref|YP_953374.1| threonyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1]
 gi|166225469|sp|A1T868|SYT_MYCVP RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|119956363|gb|ABM13368.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Mycobacterium
           vanbaalenii PYR-1]
          Length = 691

 Score =  537 bits (1382), Expect = e-150,   Method: Composition-based stats.
 Identities = 238/662 (35%), Positives = 370/662 (55%), Gaps = 44/662 (6%)

Query: 17  FPVHATGSDVAESI---SRSLAKKAVAVAI-NGKVCDLSD-PVREGSIEIITPEDPRSLA 71
                T           SR      V V   +G++ DLS  P  +  +  +T +     +
Sbjct: 15  VAAGTTAGQAVRDAGLPSRGAPDAVVVVQDPDGRLRDLSWVPDADVDVIPVTADTEDGRS 74

Query: 72  VIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIA 131
           VIRHS AH++A+AVQ+++P+ ++ IGP I DGFYYDF+  +PF+ ++L  +EK+M++I+ 
Sbjct: 75  VIRHSAAHVLAQAVQALFPDAKLGIGPPITDGFYYDFEVAEPFTPEDLEALEKRMRQIVK 134

Query: 132 RDSPFLKQYL-SHEKARELFESKKEAYKVEILESIPAK------------ENVTLY---- 174
               F ++   S ++ARE  E   E YK+E+++                 + +T Y    
Sbjct: 135 DGQLFSRRVFESKDEARE--ELANEPYKLELIDDKSGDLESSDEIMEIGGDELTAYDNLN 192

Query: 175 ---RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQEL 231
              R+  W DLCRGPH+ +T  +  F KL + + AYWRGD N   L RIYGTAW +Q+ L
Sbjct: 193 PRTRERVWGDLCRGPHIPTTRYIPAF-KLTRSSAAYWRGDQNNASLQRIYGTAWESQEAL 251

Query: 232 TQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
            ++L  +EE++KRDHRKL  E+DLF   ++ GSG+  +H KG  + + L  Y RRK  + 
Sbjct: 252 DRHLELIEEAQKRDHRKLGVELDLFSFPDELGSGLPVFHPKGGVVRRELEEYSRRKHIEA 311

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD-------LRTFALKPMNCP 342
            YE +NTP +  +HL+  SGH + Y   MF     D    D        + + LKPMNCP
Sbjct: 312 GYEFVNTPHITKEHLYITSGHLEWYADGMFPAMHIDAEYNDDGTVRKPGQDYYLKPMNCP 371

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN 402
            H  ++    +SYRELP+RL EFGSVYR E SG +HGL RVRG TQDDAH++CT+E+M +
Sbjct: 372 MHHLIYRSRGRSYRELPLRLFEFGSVYRYEKSGVVHGLTRVRGMTQDDAHIYCTREEMRD 431

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDTIKNSSQD 461
           E  ++   ++ +  D+G +   ++LST+     VGSD +W++A   ++ V ++       
Sbjct: 432 ELARLLQFVLDLLADYGLDDFYLELSTKDPDKFVGSDDMWEEATETLREVAESSG----- 486

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
            ++     G  AFYGPK    ++DA+GR+WQ  TIQ+DFN+P RF   Y  +   +  PV
Sbjct: 487 -LHLVPDPGGAAFYGPKISVQVRDALGRNWQMSTIQLDFNMPDRFELEYTAADGTRKRPV 545

Query: 522 MIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLS 581
           +IHRA+FGSIERF G++ E++ G  P WL+P+Q +   +    + Y   +   L++  + 
Sbjct: 546 LIHRALFGSIERFFGVLTEHYAGAFPAWLAPVQVVGIPVADDHIRYLDGLVAQLRALGIR 605

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            E D  ++ +  KI  H+ +K+P +++ GD++    ++  R    T    V    A+  +
Sbjct: 606 AEVDTSDDRMAKKIVNHTNQKVPFMLLAGDRDVEAEAVSFRFGDRTQVNGVPREQAVAAI 665

Query: 642 TK 643
             
Sbjct: 666 VD 667


>gi|33866012|ref|NP_897571.1| threonyl-tRNA synthetase [Synechococcus sp. WH 8102]
 gi|73919836|sp|Q7U662|SYT_SYNPX RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|33638987|emb|CAE07993.1| threonyl-tRNA synthetase [Synechococcus sp. WH 8102]
          Length = 611

 Score =  537 bits (1382), Expect = e-150,   Method: Composition-based stats.
 Identities = 246/584 (42%), Positives = 348/584 (59%), Gaps = 17/584 (2%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           + +    +   L  IRHS +H+MA AVQ ++P+ +V IGP  E GFYYDFD   PF+  +
Sbjct: 23  VVLPKTSESSQLLKIRHSMSHVMAMAVQQLFPKARVTIGPWTESGFYYDFDNPDPFTEAD 82

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG- 177
           L  I+K M +II +  P  +  ++  +A    +++ E YK+EILE +  ++ +TLY  G 
Sbjct: 83  LKAIKKGMIKIINKKVPLERVEVTRAEAETKIKAQNEPYKLEILEGL--QDPITLYTLGE 140

Query: 178 EWFDLCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           +W+DLC GPHV  TGQ+  K F+L  VAGAYWRGD  +  L RIYGTAW T ++L ++  
Sbjct: 141 DWWDLCAGPHVEHTGQLNAKAFELESVAGAYWRGDETKAQLHRIYGTAWETPEQLAEHKR 200

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEI 294
             EE+ +RDHR++ +++DLF I ++   G++FWH +G ++   +  + R+   +  YE +
Sbjct: 201 RKEEALRRDHRRIGKDLDLFSIEDEAGAGLVFWHPRGARMRLLIEEFWRQAHFEGGYELL 260

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
            TP V D  LW+ SGH D Y  +MF     D+     R + LKPMNCP HV  +   L+S
Sbjct: 261 YTPHVADISLWKTSGHLDFYAESMFGPMEVDE-----REYQLKPMNCPFHVLTYASKLRS 315

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YRELP+R AE G+VYR E  G +HGLMRVRGFTQDDAHVFC  EQ+ +E LKI +L   I
Sbjct: 316 YRELPIRWAELGTVYRYERPGVMHGLMRVRGFTQDDAHVFCLPEQISDEILKILDLTERI 375

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
              F F    + LSTRPEK +G DA+WD A   +   L+      +      +  G GAF
Sbjct: 376 LSTFDFNTYEINLSTRPEKSIGDDAVWDLATKGLIEALE------RKGWKYKIDEGGGAF 429

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  ++DAIGR WQC TIQ+DFNLP RF   YV +   K  P+MIHRA+FGS+ERF
Sbjct: 430 YGPKIDLKIEDAIGRMWQCSTIQLDFNLPERFKLDYVAADGSKQRPIMIHRAIFGSLERF 489

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
            GIM EN+ G+ P WL+P Q  +  +T     YA+ + + L    +    D   + +   
Sbjct: 490 FGIMTENYAGDYPFWLAPEQVRLLPVTDEVQPYAESLLDQLTQAGVRATIDRSGDRLGKL 549

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           IR     KIP++ + G KEA + ++ +R          ++ D +
Sbjct: 550 IRTGEQMKIPVLAVIGAKEAEQNAVSLRSRRDGDLGVAAVADLL 593


>gi|148242044|ref|YP_001227201.1| threonyl-tRNA synthetase [Synechococcus sp. RCC307]
 gi|147850354|emb|CAK27848.1| Threonyl-tRNA synthetase [Synechococcus sp. RCC307]
          Length = 609

 Score =  536 bits (1381), Expect = e-150,   Method: Composition-based stats.
 Identities = 250/581 (43%), Positives = 351/581 (60%), Gaps = 17/581 (2%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSS 116
            ++ +    +   L  IRHS +H+MA AVQ ++P  +V IGP  E GFYYDFD   PF+ 
Sbjct: 18  AAVALPKTSESPQLLKIRHSMSHVMAMAVQQLFPNARVTIGPWTETGFYYDFDNPDPFTE 77

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
            +L  I+K M +II +  P  +  +S  +A    +++ E YK+EILE +  +E +TLY  
Sbjct: 78  ADLKAIKKGMIKIINQKLPLQRVEVSRAEAETRIKAQNEPYKLEILEGL--QEPITLYTL 135

Query: 177 GE-WFDLCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
           GE W+DLC GPHV  TGQ+  K F+L  VAGAYWRGD NR  L RIYGTA+ T ++L+++
Sbjct: 136 GEKWWDLCAGPHVEHTGQLNAKAFELESVAGAYWRGDENRQQLQRIYGTAFETPEQLSEH 195

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYE 292
              +EE+++RDHR++  ++DLF I ++   G++FWH +G ++   +  + R       YE
Sbjct: 196 KRRIEEAKRRDHRRIGTDLDLFSIEDEAGAGLVFWHPRGARMRLLIEDFWREAHFAGGYE 255

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
            + TP V D  LW+ SGH D YR +MF     D+     R + LKPMNCP HV  +   L
Sbjct: 256 LLYTPHVADIDLWKTSGHLDFYRESMFGPMTVDE-----REYQLKPMNCPFHVLTYASTL 310

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
           +SY+ELP+R AE G+VYR E  G +HGLMRVRGFTQDDAHVFC  EQ+ +E LKI +L  
Sbjct: 311 RSYKELPIRWAELGTVYRYERPGVMHGLMRVRGFTQDDAHVFCLPEQISDEILKILDLTE 370

Query: 413 SIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
           +I   F F    + LSTRPEK +G DA+WD A   +   L       +   +  +  G G
Sbjct: 371 TILSTFDFRNYEINLSTRPEKSIGDDAVWDLATKGLTEALQ------RKGWDYKIDEGGG 424

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           AFYGPK +  ++DAIGR WQC TIQ+DFNLP RF   YV +   +  P+MIHRA+FGS+E
Sbjct: 425 AFYGPKIDLKIEDAIGRMWQCSTIQLDFNLPERFGLEYVAADGSRQRPIMIHRAIFGSLE 484

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
           RF GIM EN+ G+ P WL+P Q  +  +T   + YA+ I + L +  +    D   E + 
Sbjct: 485 RFFGIMTENYAGDFPFWLAPEQIRLLPVTDEVMGYAETIQSELSAAGIRSRIDRSGERLG 544

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
             IR    +KIP++ + G +EA + ++ +R         V 
Sbjct: 545 KLIRSGEQQKIPVLAVIGAQEAEQGTLSLRSRRQGDLGSVG 585


>gi|283457978|ref|YP_003362585.1| threonyl-tRNA synthetase [Rothia mucilaginosa DY-18]
 gi|283134000|dbj|BAI64765.1| threonyl-tRNA synthetase [Rothia mucilaginosa DY-18]
          Length = 706

 Score =  536 bits (1381), Expect = e-150,   Method: Composition-based stats.
 Identities = 243/664 (36%), Positives = 362/664 (54%), Gaps = 51/664 (7%)

Query: 12  GSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSL 70
           G  +           A+        K V   +NG + DLS  +  G S+E +   +P  L
Sbjct: 44  GEEREVTAKTAAELFADD------PKIVVARVNGVLVDLSHELSAGDSVEPVFIHEPDGL 97

Query: 71  AVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEII 130
            V+RHS AH+MA+AVQ    + ++ IGP I DGFY+DFD  +PF+ ++L +IEK M +II
Sbjct: 98  NVLRHSAAHVMAQAVQEYRKDAKLGIGPYITDGFYFDFDVAEPFTPEDLKKIEKSMIKII 157

Query: 131 ARDSPFLKQYLSHEKARELFESKKEAYKVEILE----------------SIPAKENVTLY 174
                F ++ ++H++A    E   E YK+E+L                     +  +T+Y
Sbjct: 158 KSGQLFRRRVVTHDEAVA--EMANEPYKLELLSLTQGPGSGADAAEGASVEVGEGEITIY 215

Query: 175 -----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNT 227
                + GE  W DLCRGPH+ +T  +   + LM+  GAYWRG    PML RIYGTAW T
Sbjct: 216 DNVHPKTGETVWKDLCRGPHLPNTKLIANGYALMRAGGAYWRGSEKNPMLQRIYGTAWPT 275

Query: 228 QQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-R 285
           + EL  Y   + E+E+RDHR+L RE+DLF   ++ G G+   H KG  I + +  Y+R R
Sbjct: 276 KDELVAYKERIAEAERRDHRRLGRELDLFSFPKNIGPGLPVIHPKGGVIKREMEDYVRTR 335

Query: 286 KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            I++ ++ ++TP +  + L+  SGH   Y   MF     D+       + LK MNCP H 
Sbjct: 336 HIQEGFQYVSTPHISKEDLFYTSGHLPYYADGMFPPMELDNGH-----YRLKAMNCPMHN 390

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            ++    +SYRELP+R  EFG+VYR+E SG L GL RVR  TQDD+H + TKEQ  +E  
Sbjct: 391 EIYRSRGRSYRELPLRFFEFGTVYRDEKSGVLQGLTRVRMITQDDSHSYVTKEQAPDEVR 450

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRP------EKRVGSDALWDDAENIMKGVLDTIKNSS 459
            +   ++S+ +DFG     ++LSTR       +K +G+D  W++A  +++ V        
Sbjct: 451 HLLKFMLSLLEDFGMTDFYLELSTRDTEGDKKDKFIGTDEQWEEATAVLEQVAKETG--- 507

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
              +      G  AFYGPK     KDAIGR WQ  T+Q DFN PSRF   Y  +      
Sbjct: 508 ---LELVPDPGGAAFYGPKISVQAKDAIGRTWQMSTVQYDFNQPSRFGLEYQAADGTVQE 564

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH 579
           PVMIH A FGSIERF+G++ E++ G  P WL+P+Q I   +  +  +Y  EIA+ L++H 
Sbjct: 565 PVMIHSAKFGSIERFLGVLTEHYAGAFPAWLAPVQVIGVPVAEAFNDYMTEIADKLRAHG 624

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
           + +E D+ ++    KIR  S +K+P I+I G ++A   ++  R  G+     V + +A+ 
Sbjct: 625 VRVEVDYGSDRFTKKIRTASTEKVPFILIAGGEDAEHGAVSFRFRGNKQENGVPVDEAVA 684

Query: 640 ILTK 643
            + +
Sbjct: 685 RIVE 688


>gi|317506992|ref|ZP_07964761.1| threonyl-tRNA synthetase [Segniliparus rugosus ATCC BAA-974]
 gi|316254750|gb|EFV14051.1| threonyl-tRNA synthetase [Segniliparus rugosus ATCC BAA-974]
          Length = 683

 Score =  536 bits (1381), Expect = e-150,   Method: Composition-based stats.
 Identities = 238/639 (37%), Positives = 363/639 (56%), Gaps = 38/639 (5%)

Query: 28  ESISRSLAKKAVAVA-INGKVCDLSD-PVREGSIEIITPEDPRSLAVIRHSCAHIMAEAV 85
             ++ S  +  V V   +G + DL+  P  +  +E +        +VIRHS AH++A+AV
Sbjct: 29  AGLATSGPEAVVVVRDADGALRDLAWSPEADALVEPVLANTEEGRSVIRHSAAHVLAQAV 88

Query: 86  QSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEK 145
           Q  +PE ++ IGP I+DGFYYDF  ++ F+ ++LA++E +M++II     F ++ +  E+
Sbjct: 89  QQEFPEAKLGIGPPIKDGFYYDFRVDRAFTPEDLARLETRMRKIIKASQRFARRVVEVEE 148

Query: 146 ARELFESKKEAYKVEILESIPAKENVTLYRQG-----------------EWFDLCRGPHV 188
           AR   E   E +K+E++      ++  +   G                 EW DLCRGPH+
Sbjct: 149 ARA--ELAGEPFKLELISDKSGIDDPEVMEVGGAELTIYDNLNPRTGEREWADLCRGPHI 206

Query: 189 RSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRK 248
            +T  +  F KL + + AYWRGD +R  L RIYGTAW + + L ++L  + E+E+RDHRK
Sbjct: 207 PTTKHIPAF-KLTRSSAAYWRGDQSRDSLQRIYGTAWESAEALERHLELIAEAERRDHRK 265

Query: 249 LAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQ 306
           L  E+DLF   ++ GSG+  +H KG  + + L  Y R + I+  YE +NTP +   HL++
Sbjct: 266 LGTELDLFSFPDELGSGLPVFHPKGGILRKELEDYSRAKHIEAGYEFVNTPHITKSHLYE 325

Query: 307 QSGHWDSYRANMFAVKCADDTI-------KDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            SGH D Y   MF     D  +       K  + + LKPMNCP H  +F    +SYRELP
Sbjct: 326 VSGHLDWYADGMFPPMHVDAELDADGAVRKPGQDYYLKPMNCPMHNLIFRSRGRSYRELP 385

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +RL EFGSVYR E SG +HGL RVRG TQDDAH++CT++QM +E  K    ++ + +D+G
Sbjct: 386 LRLFEFGSVYRYEKSGVIHGLTRVRGMTQDDAHIYCTRDQMKDELAKTLQFVLDLLRDYG 445

Query: 420 FEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
            +   ++LST+ E+  VGSD +W++A   +  V +         +      G  AFYGPK
Sbjct: 446 LDDFYLELSTKDEEKFVGSDEIWEEATRTLAEVAEASG------LTLVPDPGGAAFYGPK 499

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
                KDA+GR WQ  TIQ+DFNLP RF   Y      +  PVMIHRA+FGSIERFIG++
Sbjct: 500 ISVQAKDALGRTWQMSTIQLDFNLPERFGLEYTGPSGHREQPVMIHRALFGSIERFIGVL 559

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           +E++ G  P WLSP+QA+   ++   V + +   + L++  +    D  ++ +  KI  H
Sbjct: 560 VEHYAGAFPAWLSPVQAMGIPVSDDHVPHLRAFVDSLRAGGVRAHLDTSDDRMQKKIFTH 619

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
           + +KIP +++ G ++    ++  R         V + +A
Sbjct: 620 TAQKIPFLVLAGARDVEAGTVSFRFRDGGQRNAVPVDEA 658


>gi|116075451|ref|ZP_01472711.1| threonyl-tRNA synthetase [Synechococcus sp. RS9916]
 gi|116067648|gb|EAU73402.1| threonyl-tRNA synthetase [Synechococcus sp. RS9916]
          Length = 609

 Score =  536 bits (1380), Expect = e-150,   Method: Composition-based stats.
 Identities = 255/587 (43%), Positives = 350/587 (59%), Gaps = 17/587 (2%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSD 117
           ++ +    +  +L  IRHS +H+MA AVQ ++P+ QV IGP  E GFYYDFD   PF+  
Sbjct: 22  TVVLPKTSESDTLLRIRHSMSHVMAMAVQKLFPKAQVTIGPWTESGFYYDFDSPDPFTEA 81

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +L  I K+M +II R  P  +  +S  +A    +++ E YK+EIL  I  +E +TLY  G
Sbjct: 82  DLKAIRKEMIKIINRKLPLERVEVSRAEAEAKIKAQNEPYKLEILSGI--QEPITLYTLG 139

Query: 178 E-WFDLCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
           E W+DLC GPHV +T ++  K F+L  VAGAYWRGD N   L RIYGTAW T ++L ++ 
Sbjct: 140 EEWWDLCAGPHVANTSELNAKAFELESVAGAYWRGDENNAQLQRIYGTAWETPEQLAEHK 199

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEE 293
              EE+ +RDHR++  ++DLF I ++   G++FWH +G ++   +  + R+   +  YE 
Sbjct: 200 RRKEEALRRDHRRIGTDLDLFSIEDEAGAGLVFWHPRGARMRLLIEDFWRQAHFEGGYEL 259

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           + TP V D  LW+ SGH D Y  +MF     D+     R + LKPMNCP HV  +   L+
Sbjct: 260 LYTPHVADISLWKTSGHLDFYSESMFGPMVVDE-----REYQLKPMNCPFHVLTYASTLR 314

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYRELP+R AE G+VYR E  G +HGLMRVRGFTQDDAHVFC  EQ+ +E L+I +L   
Sbjct: 315 SYRELPIRWAELGTVYRYERPGVMHGLMRVRGFTQDDAHVFCLPEQISDEILRILDLTER 374

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           I   F F+   + LSTRPEK +G DA+WD A   +   L+      +   +  V  G GA
Sbjct: 375 ILSTFDFKNYEINLSTRPEKSIGDDAVWDLATKGLIEALE------RKGWDYKVDEGGGA 428

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  ++DAIGR WQC TIQ+DFNLP RF   YV + S K  P+MIHRA+FGS+ER
Sbjct: 429 FYGPKIDLKIEDAIGRMWQCSTIQLDFNLPERFKLDYVAADSSKQRPIMIHRAIFGSLER 488

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           F GIM EN+ G+ P WL+P Q  +  +T     YA+ + + LK+  +    D   E +  
Sbjct: 489 FFGIMTENYAGDFPFWLAPEQIRLLPVTDEVQSYAESLCDQLKAAGVRASVDRSGERLGK 548

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
            IR     KIP++ + G KEA + S  +R         V     I  
Sbjct: 549 LIRTGEKMKIPVLAVIGAKEAEQASASLRSRRDGDLGLVGADALIEA 595


>gi|194477315|ref|YP_002049494.1| Threonyl-tRNA synthetase, class IIa [Paulinella chromatophora]
 gi|171192322|gb|ACB43284.1| Threonyl-tRNA synthetase, class IIa [Paulinella chromatophora]
          Length = 599

 Score =  536 bits (1380), Expect = e-150,   Method: Composition-based stats.
 Identities = 252/586 (43%), Positives = 355/586 (60%), Gaps = 17/586 (2%)

Query: 51  SDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK 110
           +D V++ ++E++   +   L  IRHS +H+MA AVQ ++P  Q+ IGP  E GFYYDFD 
Sbjct: 5   TDSVKQNTMELLKTSESPQLLKIRHSMSHVMAMAVQKLFPNAQITIGPWTESGFYYDFDN 64

Query: 111 EQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN 170
            +PF+  +L  I+K M +II ++  F +  ++ +      +++ E YK+EIL  +   E 
Sbjct: 65  PEPFTEADLKSIKKGMIKIINQNLNFERVEVTRQDVACRIKAQNEPYKLEILAGLI--EP 122

Query: 171 VTLYRQGE-WFDLCRGPHVRSTGQVKK-FFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQ 228
           +T+Y+ GE W+DLC GPHV +T ++    F L  VAG+YWRGD  +  L RIYGTAW T 
Sbjct: 123 ITIYKLGEQWWDLCAGPHVNNTNELNPKAFDLESVAGSYWRGDEKKAKLQRIYGTAWETP 182

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-K 286
           ++L +Y    +E+ +RDHR+L  ++DLF I ++ GSG++FWH  G +I   +  + R+  
Sbjct: 183 EQLEEYKRRKKEALRRDHRRLGTDLDLFSIEDEAGSGLVFWHPNGARIRLLIEDFWRQSH 242

Query: 287 IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA 346
           ++  YE + TP + D  LW+ SGH D Y  +MF+    D+     R + LKPMNCP HV 
Sbjct: 243 LEAGYELLYTPHIADIRLWKTSGHLDFYSESMFSPMQVDE-----REYQLKPMNCPFHVL 297

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
            +   L+SYRELP+R AE G+VYR E  G +HGLMRVRGFTQDDAH+FC  EQ+ +E L+
Sbjct: 298 TYASKLRSYRELPIRWAELGTVYRYERPGVMHGLMRVRGFTQDDAHIFCLPEQIGSEVLE 357

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           + NL   I   F F K  + LSTRPEK +G D +WD A N +   L+          N  
Sbjct: 358 VLNLTERILSAFDFTKYEINLSTRPEKFIGGDDVWDLATNGLVEALNA------KNWNYK 411

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
           +  G GAFYGPK +  +KDAIGR WQC TIQ+DFNLP RFN  YV S   +  P+MIHRA
Sbjct: 412 IDEGGGAFYGPKIDLKIKDAIGRTWQCSTIQLDFNLPERFNIEYVGSDGSRQRPIMIHRA 471

Query: 527 VFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF 586
           +FGS+ERF G+MIE+  G+ P WL+P Q  +  +T   + YA+E+ + LK   +    D 
Sbjct: 472 IFGSLERFFGVMIESCAGDFPFWLAPEQIRLLPVTDEVITYAEELLSQLKIAGVRASIDR 531

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
             + +   IR    KKIPI+ + G KEA      +R         V
Sbjct: 532 TGDRLGKLIRNGEQKKIPILAVVGAKEAEVGGASLRSRYEGELGLV 577


>gi|313792096|gb|EFS40197.1| threonyl-tRNA synthetase [Propionibacterium acnes HL110PA1]
 gi|313801952|gb|EFS43186.1| threonyl-tRNA synthetase [Propionibacterium acnes HL110PA2]
 gi|313812897|gb|EFS50611.1| threonyl-tRNA synthetase [Propionibacterium acnes HL025PA1]
 gi|313838778|gb|EFS76492.1| threonyl-tRNA synthetase [Propionibacterium acnes HL086PA1]
 gi|314962753|gb|EFT06853.1| threonyl-tRNA synthetase [Propionibacterium acnes HL082PA1]
 gi|315077970|gb|EFT50021.1| threonyl-tRNA synthetase [Propionibacterium acnes HL053PA2]
 gi|327453186|gb|EGE99840.1| threonyl-tRNA synthetase [Propionibacterium acnes HL092PA1]
          Length = 689

 Score =  536 bits (1380), Expect = e-150,   Method: Composition-based stats.
 Identities = 236/674 (35%), Positives = 356/674 (52%), Gaps = 48/674 (7%)

Query: 4   DIKLTFPD-GSIK--NFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
            I +T    G+ +        TG D+  S      +  VA+ ++G + DL   + +G+ +
Sbjct: 7   SISITLHRSGTSRTQQVDTTTTGLDLFGS-----DRAVVAMRVDGNLVDLQRELHDGAEV 61

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           E +       L +IRHS  H+MA+AVQ ++PEV + IGP I DGFYYDF   +P + + L
Sbjct: 62  EPVEATSEDGLNIIRHSATHVMAQAVQQLYPEVNLGIGPFITDGFYYDFGNIEPVTPEVL 121

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK----------- 168
           +++EK+M+ I+  +  F+++  + E ARE  E   + YK+E++ +               
Sbjct: 122 SELEKRMKRIVKENQRFVRRVTTEESARE--ELADQPYKLELIGTKGKGAEGASVEVGGG 179

Query: 169 -----ENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
                +NV    +  W DLCRGPHV ST  +   F L K + AYW+GD     L RIYGT
Sbjct: 180 ELTIYDNVRRNGEVAWKDLCRGPHVPSTKYLANTFALTKFSAAYWKGDQANDQLQRIYGT 239

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISY 282
           AW +++ L  Y   ++E+E+RDHRKL  E+DLF   E+ G G++ +H KG  +   +  +
Sbjct: 240 AWASREGLAAYQQRIKEAERRDHRKLGAELDLFSFPEEIGPGLVVFHPKGAMLRHLIEEH 299

Query: 283 -MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD-------LRTF 334
            + R ++  +  ++TP++    L+  SGH   Y   MF     D+   +        + +
Sbjct: 300 VIARHMEAGFNFVHTPEITKGGLFHTSGHLPYYADTMFPPMLVDEERDEEGNVTRAGQEY 359

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
            LK MNCP H  +F    +SYRELP+R  E G  YR E SG +HGL R+RGF QDD+H +
Sbjct: 360 YLKAMNCPMHNLIFRSRGRSYRELPLRFFEMGHDYRYEKSGVVHGLTRMRGFAQDDSHTY 419

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP------EKRVGSDALWDDAENIM 448
           CT+EQ   E  K     +SI  DFG     ++LSTR       EK +GSD  W  A + +
Sbjct: 420 CTREQAPGEIKKQIEFFLSILADFGLNDFYLELSTRESDSAKKEKFIGSDEDWQVATDTL 479

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
             V  +        +      G  AFYGPK    ++DAIGR WQ  TIQ DFN P RF+ 
Sbjct: 480 DQVCRSTG------LQLVPDPGGAAFYGPKVSVQVRDAIGRTWQMSTIQYDFNQPERFDL 533

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYA 568
            Y  + S    P+M+H A  GS+ERFIG++ E++ G  P+WLSP+Q  +  +  +  +Y 
Sbjct: 534 EYAAADSTHQRPIMLHSAKLGSVERFIGVLTEHYAGAFPVWLSPVQVRLVPVAEAFNDYV 593

Query: 569 QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
              A +L S  + +ETD  ++    KIR  S  K+P I+I G ++A   ++  R    + 
Sbjct: 594 TGFAEVLGSRGIRVETDLSSDRFGKKIRNASKDKVPFILIAGGEDAEAGAVSFRLRDGSQ 653

Query: 629 TQKVSLLDAIPILT 642
              V L +A+ I+ 
Sbjct: 654 VNGVVLDEAVRIIA 667


>gi|289425232|ref|ZP_06427009.1| threonine--tRNA ligase [Propionibacterium acnes SK187]
 gi|289154210|gb|EFD02898.1| threonine--tRNA ligase [Propionibacterium acnes SK187]
          Length = 684

 Score =  536 bits (1380), Expect = e-150,   Method: Composition-based stats.
 Identities = 236/674 (35%), Positives = 356/674 (52%), Gaps = 48/674 (7%)

Query: 4   DIKLTFPD-GSIK--NFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
            I +T    G+ +        TG D+  S      +  VA+ ++G + DL   + +G+ +
Sbjct: 2   SISITLHRSGTSRTQQVDTTTTGLDLFGS-----DRAVVAMRVDGNLVDLQRELHDGAEV 56

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           E +       L +IRHS  H+MA+AVQ ++PEV + IGP I DGFYYDF   +P + + L
Sbjct: 57  EPVEATSEDGLNIIRHSATHVMAQAVQQLYPEVNLGIGPFITDGFYYDFGNIEPVTPEVL 116

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK----------- 168
           +++EK+M+ I+  +  F+++  + E ARE  E   + YK+E++ +               
Sbjct: 117 SELEKRMKRIVKENQRFVRRVTTEESARE--ELADQPYKLELIGTKGKGAEGASVEVGGG 174

Query: 169 -----ENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
                +NV    +  W DLCRGPHV ST  +   F L K + AYW+GD     L RIYGT
Sbjct: 175 ELTIYDNVRRNGEVAWKDLCRGPHVPSTKYLANTFALTKFSAAYWKGDQANDQLQRIYGT 234

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISY 282
           AW +++ L  Y   ++E+E+RDHRKL  E+DLF   E+ G G++ +H KG  +   +  +
Sbjct: 235 AWASREGLAAYQQRIKEAERRDHRKLGAELDLFSFPEEIGPGLVVFHPKGAMLRHLIEEH 294

Query: 283 -MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD-------LRTF 334
            + R ++  +  ++TP++    L+  SGH   Y   MF     D+   +        + +
Sbjct: 295 VIARHMEAGFNFVHTPEITKGGLFHTSGHLPYYADTMFPPMLVDEERDEEGNVTRAGQEY 354

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
            LK MNCP H  +F    +SYRELP+R  E G  YR E SG +HGL R+RGF QDD+H +
Sbjct: 355 YLKAMNCPMHNLIFRSRGRSYRELPLRFFEMGHDYRYEKSGVVHGLTRMRGFAQDDSHTY 414

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP------EKRVGSDALWDDAENIM 448
           CT+EQ   E  K     +SI  DFG     ++LSTR       EK +GSD  W  A + +
Sbjct: 415 CTREQAPGEIKKQIEFFLSILADFGLNDFYLELSTRESDSAKKEKFIGSDEDWQVATDTL 474

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
             V  +        +      G  AFYGPK    ++DAIGR WQ  TIQ DFN P RF+ 
Sbjct: 475 DQVCRSTG------LQLVPDPGGAAFYGPKVSVQVRDAIGRTWQMSTIQYDFNQPERFDL 528

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYA 568
            Y  + S    P+M+H A  GS+ERFIG++ E++ G  P+WLSP+Q  +  +  +  +Y 
Sbjct: 529 EYAAADSTHQRPIMLHSAKLGSVERFIGVLTEHYAGAFPVWLSPVQVRLVPVAEAFNDYV 588

Query: 569 QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
              A +L S  + +ETD  ++    KIR  S  K+P I+I G ++A   ++  R    + 
Sbjct: 589 TGFAEVLGSRGIRVETDLSSDRFGKKIRNASKDKVPFILIAGGEDAEAGAVSFRLRDGSQ 648

Query: 629 TQKVSLLDAIPILT 642
              V L +A+ I+ 
Sbjct: 649 VNGVVLDEAVRIIA 662


>gi|255323684|ref|ZP_05364814.1| threonyl-tRNA synthetase [Campylobacter showae RM3277]
 gi|255299398|gb|EET78685.1| threonyl-tRNA synthetase [Campylobacter showae RM3277]
          Length = 606

 Score =  536 bits (1380), Expect = e-150,   Method: Composition-based stats.
 Identities = 238/613 (38%), Positives = 372/613 (60%), Gaps = 24/613 (3%)

Query: 37  KAVAVAINGKVCDLSDPV-REGSIEIITPE-DPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
             +A  ++G + D      RE + E I  +  P +L VIRHSCAH+MA+A++ ++P+ + 
Sbjct: 3   DIIAYKLDGNIVDTQSINGRENAAEPIYFDNSPDALNVIRHSCAHLMAQAIKELYPQAKF 62

Query: 95  AIGPIIEDGFYYDF---DKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFE 151
            +GP +EDGFYYDF   D     S ++LA IE KM+E+       +K   S  KA    +
Sbjct: 63  FVGPNVEDGFYYDFKVDDANSKLSDEDLAAIEAKMKELAEAKLDIVKA--SSTKAFMSDK 120

Query: 152 SKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGD 211
            K +  K E+L+ IP  E V+ Y+QG + DLCRGPH+ +T  +K FFKL +VAGAY  GD
Sbjct: 121 FKDDELKQEVLKRIPEGE-VSSYKQGNFEDLCRGPHLPNTKFLK-FFKLTRVAGAYLGGD 178

Query: 212 SNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHR 270
             R M++RIYGTA+  ++ L +++  +EE++KRDHRKL  EM LF   ++ G G+  W  
Sbjct: 179 ETREMINRIYGTAFADKESLKEHIRIIEEAKKRDHRKLGVEMKLFTFDDEVGGGLPIWLP 238

Query: 271 KGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
            G ++   L   + +      YE +  P++L   +W++SGH+ +Y+ NM+       T  
Sbjct: 239 NGGRLRSKLEQILYKAHRDRGYEPVRGPELLKADVWKKSGHYANYKENMYF------TTI 292

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
           D   + +KPMNC GH+ V+   ++SYR+LP++  E+G V+R+E SG LHGL RVR F QD
Sbjct: 293 DEAEYGIKPMNCVGHIKVYQSDIRSYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFAQD 352

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMK 449
           D+H+FC   Q+    L+I      I ++FGF   M ++ST+P K +G D +W+ A   +K
Sbjct: 353 DSHIFCMPSQIKENILEILKFAGKIMENFGFHYEM-EISTKPAKAIGGDEIWETATKALK 411

Query: 450 GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAF 509
             LD      ++    G+  G GAFYGPK +  + DA+ R WQCGTIQVDFNLP RF+  
Sbjct: 412 EALD------ENGFKYGIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDFNLPERFDLG 465

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQ 569
           Y+++++E+  PVM+HRA+ GS ERFIGI+IE+  G LP +++P Q ++  I+ + ++YA+
Sbjct: 466 YIDANNERQQPVMLHRALLGSFERFIGILIEHTGGELPFFVAPTQVVIVPISDAHLDYAK 525

Query: 570 EIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
            +A  L+   +  E   +NE++N +IR    +++P+I + GD E +  +I +R   +   
Sbjct: 526 TVAKELRKIGVDSEIASKNESLNKRIRTAEKQRVPMIAVLGDNEVANSAIALRDRTTREQ 585

Query: 630 QKVSLLDAIPILT 642
           + + L + + +L 
Sbjct: 586 KDMKLDEFVGLLK 598


>gi|315084265|gb|EFT56241.1| threonyl-tRNA synthetase [Propionibacterium acnes HL027PA2]
          Length = 689

 Score =  536 bits (1380), Expect = e-150,   Method: Composition-based stats.
 Identities = 235/674 (34%), Positives = 354/674 (52%), Gaps = 48/674 (7%)

Query: 4   DIKLTFPD-GSIK--NFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
            I +T    G+ +        TG D+  S      +  VA+ ++G + DL   + +G+ +
Sbjct: 7   SISITLHRSGTSRTQQVDTTTTGLDLFGS-----DRAVVAMRVDGNLVDLQRELHDGAEV 61

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           E +       L +IRHS  H+MA+AVQ ++PEV + IGP I DGFYYDF   +P + + L
Sbjct: 62  EPVEATSEDGLNIIRHSATHVMAQAVQQLYPEVNLGIGPFITDGFYYDFGNIEPVTPEVL 121

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK----------- 168
           +++EK+M+ I+  +  F+++  + E ARE  E   + YK+E++ +               
Sbjct: 122 SELEKRMKRIVKENQRFVRRVTTEESARE--ELADQPYKLELIGTKGKGAEGASVEVGGG 179

Query: 169 -----ENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
                +NV    +  W DLCRGPHV ST  +   F L K + AYW+GD     L RIYGT
Sbjct: 180 ELTIYDNVRRNGEVAWKDLCRGPHVPSTKYLANTFALTKFSAAYWKGDQANDQLQRIYGT 239

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISY 282
           AW +++ L  Y   ++E+E+RDHRKL  E+DLF   E+ G G++ +H KG  +   +  +
Sbjct: 240 AWASREGLAAYQQRIKEAERRDHRKLGAELDLFSFPEEIGPGLVVFHPKGAMLRHLIEEH 299

Query: 283 -MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD-------LRTF 334
            + R ++  +  ++TP++    L+  SGH   Y   MF     D+   +        + +
Sbjct: 300 VIARHMEAGFNFVHTPEITKGGLFHTSGHLPYYADTMFPPMLVDEERDEEGNVTRAGQEY 359

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
            LK MNCP H  +F    +SYRELP+R  E G  YR E SG +HGL R+RGF QDD+H +
Sbjct: 360 YLKAMNCPMHNLIFRSRGRSYRELPLRFFEMGHDYRYEKSGVVHGLTRMRGFAQDDSHTY 419

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP------EKRVGSDALWDDAENIM 448
           CT+EQ   E  K     +SI  DFG     ++LSTR       EK +GSD  W  A + +
Sbjct: 420 CTREQAPGEIKKQIEFFLSILADFGLNDFYLELSTRESDSAKKEKFIGSDEDWQVATDTL 479

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
             V  +        +      G  AFYGPK    ++DAIGR WQ  TIQ DFN P RF+ 
Sbjct: 480 DQVCRSTG------LQLVPDPGGAAFYGPKVSVQVRDAIGRTWQMSTIQYDFNQPERFDL 533

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYA 568
            Y  +      P+M+H A  GS+ERFIG++ E++ G  P+WLSP+Q  +  +  +  +Y 
Sbjct: 534 EYAAADGTHQRPIMLHSAKLGSVERFIGVLTEHYAGAFPVWLSPVQVRLVPVAEAFNDYV 593

Query: 569 QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
              A +L S  + +ETD  ++    KIR  S  K+P I+I G ++A   ++  R    + 
Sbjct: 594 TGFAEVLGSRGIRVETDLSSDRFGKKIRNASKDKVPFILIAGGEDAEAGAVSFRLRDGSQ 653

Query: 629 TQKVSLLDAIPILT 642
              V L  A+ I+ 
Sbjct: 654 VNGVVLDGAVRIIA 667


>gi|68070445|ref|XP_677134.1| threonine--tRNA ligase [Plasmodium berghei strain ANKA]
 gi|56497130|emb|CAH95381.1| threonine--tRNA ligase, putative [Plasmodium berghei]
          Length = 780

 Score =  536 bits (1380), Expect = e-150,   Method: Composition-based stats.
 Identities = 234/723 (32%), Positives = 375/723 (51%), Gaps = 99/723 (13%)

Query: 3   SDIKLTFPDGSIK-NFPVHATGSDVAESISRSLAKKAVAVAI------------------ 43
            +I +   DGSIK       T   +A  IS+ L++ ++   +                  
Sbjct: 57  KEINIELLDGSIKIGQKNVTTPYQIASQISKKLSENSIVAKVIYLDNINLNLCDIENDHF 116

Query: 44  ----NGK-----VCDLSDP-VREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQ 93
               N K     + D++ P +    I+ +  E      V  HS AHI+  +++ ++    
Sbjct: 117 EEKDNDKSQAGILWDMNVPLIGNCKIKFLGIETIEGKKVFWHSSAHILGSSLEKLYGG-Y 175

Query: 94  VAIGPIIEDGFYYDFD-KEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFES 152
           + IGP + +GFYYD         S+   +IE +  +++  +  F K   + E+  ELF+ 
Sbjct: 176 LTIGPALSEGFYYDIYLGNNSILSENYNKIENEYNKLVKENVEFEKMVCTKEEVLELFKY 235

Query: 153 KKEAYKVEILESI--PAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRG 210
               +K+E+++S      E  ++Y+ G++ DLC GPH+++TG+VK F K++K + AYW G
Sbjct: 236 --NPFKIELIKSKIRNDNEKTSVYKCGDFIDLCLGPHIKNTGKVKAF-KVLKNSSAYWLG 292

Query: 211 DSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSG-VIFWH 269
           + N   L R+YG ++  + ELT Y+ F+EE++KRDHR + + ++LF   ++ S    FW 
Sbjct: 293 NKNNDSLQRVYGISFQKKTELTDYIKFIEEAKKRDHRNVGKNLNLFFFEKETSPGSGFWF 352

Query: 270 RKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTI 328
             G KI+  LI +MR++ +   YEE+ TP +    LW+ SGH+ +Y+  MF         
Sbjct: 353 AHGAKIYNKLIEFMRKEYRIRKYEEVITPNIFSCDLWKTSGHYQNYKNCMFIFNI----- 407

Query: 329 KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQ 388
            + + + +KPMNCPGH  +F     SY+ LP+RLA+FG ++RNE +GSL GL RVR F Q
Sbjct: 408 -ENKEWGMKPMNCPGHCLIFKQLNASYKSLPIRLADFGVLHRNEITGSLSGLTRVRRFQQ 466

Query: 389 DDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIM 448
           DDAH+FC+ + +  E + +   I  +Y  FGF+  +  LSTRP K +G    W+ AE  +
Sbjct: 467 DDAHIFCSLDHIKTEVVNVLQFIFFVYNLFGFKYDL-YLSTRPPKYIGDIDTWNFAEKSL 525

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
           K  L+         +   +  G+GAFYGPK + +LKD++ R  QCGT+Q+DF LP RFN 
Sbjct: 526 KEALELAN------VEWKLNEGDGAFYGPKIDIVLKDSLNRSHQCGTVQLDFQLPIRFNL 579

Query: 509 FYVN---------------------------------SHSEKC--------------HPV 521
            Y N                                  ++E                 P+
Sbjct: 580 QYKNKEYGVGQETDSNLVNDSNIDPIEKKEDSTLENIDNNEDAINSQSTAILKKGFDRPI 639

Query: 522 MIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLS 581
           +IHRA+ GS+ERF+ I++E+  G  P WLSP QAIV  I+    EYA+ I N+L ++   
Sbjct: 640 IIHRAILGSVERFVAILVEHTSGKFPFWLSPRQAIVLPISDKFNEYAKYIHNVLTNNLFD 699

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV-SLLDAIPI 640
           ++ D    T+N KIRE  +K+   I++ G+KE S  ++ +R   +   QKV ++ + +  
Sbjct: 700 VDVDISVNTLNKKIREAQLKQYNFILVVGEKEISTNTVTVRDRDNPNDQKVYTIQELVNT 759

Query: 641 LTK 643
             K
Sbjct: 760 FKK 762


>gi|293192627|ref|ZP_06609581.1| threonine--tRNA ligase [Actinomyces odontolyticus F0309]
 gi|292820134|gb|EFF79131.1| threonine--tRNA ligase [Actinomyces odontolyticus F0309]
          Length = 677

 Score =  535 bits (1379), Expect = e-150,   Method: Composition-based stats.
 Identities = 231/674 (34%), Positives = 348/674 (51%), Gaps = 47/674 (6%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
           MP DI L   DG  +  P   TG+   E      ++  VA+ ++G   DL  P   G+ +
Sbjct: 1   MP-DISLVI-DGHEQTVPAGTTGTTWFEK-----SRDVVAIKVDGTPRDLETPFEAGTTV 53

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           E IT      L ++RHS  H++A+AVQ ++P+V + IGP I DGFYYDF      + + L
Sbjct: 54  EAITLASEDGLNILRHSATHVLAQAVQDVFPDVNLGIGPFITDGFYYDFGNIDAVTPELL 113

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK----------- 168
             +EK+M+ I+     F+++ +S E    + E  ++ YK+E++ +               
Sbjct: 114 RDLEKRMKRIVKEGQRFVRREISEE--EAVVELAEQPYKLELVTTKGKGAEGASVEVGGG 171

Query: 169 -----ENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
                +NV       W DLCRGPH+ ST  +   F L K + AYW+GD     L RIYGT
Sbjct: 172 TLTMYDNVRRDGSVAWKDLCRGPHLPSTKLIGNGFALTKASAAYWKGDQAGDQLQRIYGT 231

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISY 282
           AW ++++L  Y   ++E+E+RDHR+L  E+DL+   E+ G G++ +H KG  +   + SY
Sbjct: 232 AWASKEDLVAYQERIKEAERRDHRRLGAELDLYSFPEEIGPGLVVFHPKGGILRHEIESY 291

Query: 283 M-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD-------LRTF 334
           +  R     ++ ++TP++    L+  SGH   Y   MF     D+   +        + +
Sbjct: 292 VTDRHKAAGFDFVHTPEISKGGLFHTSGHLPYYADTMFPPMLVDEERDEDGNVTKAGQEY 351

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
            LK MNCP H  +F    +SYRELP+R  E G  YR E SG +HGL R+RGFTQDD+H +
Sbjct: 352 YLKAMNCPMHNLIFRSRGRSYRELPLRFYELGHDYRYEKSGVVHGLTRMRGFTQDDSHTY 411

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK------RVGSDALWDDAENIM 448
           CT EQ   E        +SI   FG +   ++LSTR E        +GSD  W  A   +
Sbjct: 412 CTPEQASEEIRTQIAFFLSILSAFGLKDFYLELSTRDEDGKKKDKFIGSDEDWAAATKAL 471

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
           +             ++     G  AFYGPK    +KDAIGR WQ  TIQ DFN P RF+ 
Sbjct: 472 EDACAATG------LDLVPDPGGAAFYGPKVSVQVKDAIGRTWQMSTIQYDFNQPDRFDL 525

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYA 568
            Y  +   +  PVMIH A  GS+ERFIG++ E++ G  P WLSP+Q  +  +  +   Y 
Sbjct: 526 EYTAADGSRQRPVMIHSAKLGSVERFIGVLTEHYAGAFPAWLSPVQVRLIPVAEAFDGYV 585

Query: 569 QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
           +++A  L+   + +ETD  ++    KIR  S  KIP  +I G ++    ++  R    + 
Sbjct: 586 KDVAAKLRERGVRVETDLSDDRFGKKIRNASKDKIPFTLIAGGEDVEAGAVSFRLRDGSQ 645

Query: 629 TQKVSLLDAIPILT 642
              V++  A+ ++ 
Sbjct: 646 HNGVAVDRAVELIV 659


>gi|154344603|ref|XP_001568243.1| threonyl-tRNA synthetase [Leishmania braziliensis MHOM/BR/75/M2904]
 gi|134065580|emb|CAM43350.1| putative threonyl-tRNA synthetase [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 789

 Score =  535 bits (1379), Expect = e-150,   Method: Composition-based stats.
 Identities = 224/747 (29%), Positives = 353/747 (47%), Gaps = 114/747 (15%)

Query: 1   MPSDIKLTFPDGSIKNFPVHAT-GSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGS 58
           M + IK+T PDG + +     T   D+A+ +S SL  K +   +N  + DL+ P+  +  
Sbjct: 44  MKAPIKVTLPDGKVMDAESWVTRPLDIAKCLSNSLPDKVIVARVNEALWDLTRPLEGDCH 103

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFSSD 117
           +E++  +D  +  V  HS +H++  A++ I+ + ++++GP + E GF+Y+    +P S  
Sbjct: 104 LELLDWDDEDAHEVFWHSSSHVLGYALERIF-DTKLSVGPALKEGGFFYEGLTNRPVSES 162

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +   IE  MQE++ +  P+ +  +S E A  LF   +   K+ +   +P     T+YR G
Sbjct: 163 DYKAIESAMQELVKQKMPYQRLEVSKEDALRLFGYTEFKSKI-LASKVPDGGTCTVYRCG 221

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
              D CRGPH+  TG+VK F  + K + +Y+ G +   +L R+YG ++     LT++   
Sbjct: 222 MLIDPCRGPHLPDTGRVKAF-AVTKNSSSYFEGKAENEVLQRVYGISFPKNIMLTEWKMI 280

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
            EE+ KRDHR + R+ +LF   E   G  FW   G +I+ TL+ ++R+K +   ++E+ +
Sbjct: 281 QEEAAKRDHRVIGRQQNLFTFNEVSPGSAFWLPHGARIYNTLVEFLRKKYRRCGFQEVIS 340

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +    LW  SGHW+ Y  NMF  KC      +   F LKPMNCPGH  +F     SYR
Sbjct: 341 PNMYSSKLWMVSGHWEKYADNMFCTKC------EKEDFGLKPMNCPGHCIMFASQPHSYR 394

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ELP+R A+FG ++RNE SG+L GL RVR F QDDAH+FC  +Q+ +E       +  +Y 
Sbjct: 395 ELPIRYADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCRMDQITDEMEGQMQFLSDVYG 454

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTI--------------------- 455
             GF K     STRP  ++GSDALWD +E+ ++  L+                       
Sbjct: 455 VLGF-KFYFYHSTRPANKLGSDALWDQSESYLRAALNRFCGIPEELPDPLRPDQRFCYDG 513

Query: 456 ------------------------KNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDW 491
                                   K  +          G+GAFYGPK + +++DA+ R  
Sbjct: 514 KPESVKKMKILMKKVEHSEDPNAWKGPTNGGEGWIENAGDGAFYGPKIDIVVEDALRRRH 573

Query: 492 QCGTIQVDFNLPSRFNAFYV-------------NSHSEKCHPVMI-----------HRAV 527
           QC TIQ+DFNLPSRF   Y                  +   P               +  
Sbjct: 574 QCATIQLDFNLPSRFGLKYTLPAAEKEEVAAASMEKRKHTDPAPTTASPPAAADDESKPK 633

Query: 528 FGSIE---RFIGI----------------------------MIENFKGNLPLWLSPIQAI 556
             + E   R +GI                            + E+F G+ P WLSP Q +
Sbjct: 634 LSTYEAAVRDLGIDLELDANQARPVMIHRAILGSLERSIAILCEHFGGDWPFWLSPRQVM 693

Query: 557 VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASE 616
           V  +++S   YAQ++ + +       + D    T++ KIR     +   I++ G +E   
Sbjct: 694 VVPVSASNYGYAQKVRDTMHDAGFYADVDNGAATLDKKIRNSEKARYNFILVVGQQEQDA 753

Query: 617 RSIGIRRFGSTTTQKVSLLDAIPILTK 643
            S+ IR  G       SL + +   T+
Sbjct: 754 TSVNIRARGERRLGNKSLAEVVQWFTE 780


>gi|154508918|ref|ZP_02044560.1| hypothetical protein ACTODO_01429 [Actinomyces odontolyticus ATCC
           17982]
 gi|153798552|gb|EDN80972.1| hypothetical protein ACTODO_01429 [Actinomyces odontolyticus ATCC
           17982]
          Length = 677

 Score =  535 bits (1379), Expect = e-150,   Method: Composition-based stats.
 Identities = 231/674 (34%), Positives = 347/674 (51%), Gaps = 47/674 (6%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
           MP DI L   DG  +  P   TG+   E      ++  VA+ ++G   DL  P   G+ +
Sbjct: 1   MP-DISLVI-DGHEQTVPAGTTGTTWFEK-----SRDVVAIKVDGTPRDLETPFEAGTTV 53

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           E IT      L ++RHS  H++A+AVQ ++P+V + IGP I DGFYYDF      + + L
Sbjct: 54  EAITLASEDGLNILRHSATHLLAQAVQDVFPDVNLGIGPFITDGFYYDFGNIDAVTPELL 113

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK----------- 168
             +EK+M+ I+     F+++ +S E    + E  ++ YK+E++ +               
Sbjct: 114 RDLEKRMKRIVKEGQRFVRREISEE--EAVVELAEQPYKLELVTTKGKGAEGASVEVGGG 171

Query: 169 -----ENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
                +NV       W DLCRGPH+ ST  +   F L K + AYW+GD     L RIYGT
Sbjct: 172 TLTMYDNVRRDGSVAWKDLCRGPHLPSTKLIGNGFALTKASAAYWKGDQAGDQLQRIYGT 231

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISY 282
           AW ++ +L  Y   ++E+E+RDHR+L  E+DL+   E+ G G++ +H KG  +   + SY
Sbjct: 232 AWASKDDLVAYQERIKEAERRDHRRLGAELDLYSFPEEIGPGLVVFHPKGGILRHEIESY 291

Query: 283 M-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD-------LRTF 334
           +  R     ++ ++TP++    L+  SGH   Y   MF     D+   +        + +
Sbjct: 292 VTDRHKAAGFDFVHTPEISKGGLFHTSGHLPYYADTMFPPMLVDEERDEDGNVTKAGQEY 351

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
            LK MNCP H  +F    +SYRELP+R  E G  YR E SG +HGL R+RGFTQDD+H +
Sbjct: 352 YLKAMNCPMHNLIFRSRGRSYRELPLRFYELGHDYRYEKSGVVHGLTRMRGFTQDDSHTY 411

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK------RVGSDALWDDAENIM 448
           CT EQ   E        +SI   FG +   ++LSTR E        +GSD  W  A   +
Sbjct: 412 CTPEQASEEIRTQIEFFLSILSAFGLKDFYLELSTRDEDGKKKDKFIGSDEDWAAATKAL 471

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
           +             ++     G  AFYGPK    +KDAIGR WQ  TIQ DFN P RF+ 
Sbjct: 472 EDACAATG------LDLVPDPGGAAFYGPKVSVQVKDAIGRTWQMSTIQYDFNQPDRFDL 525

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYA 568
            Y  +   +  PVMIH A  GS+ERFIG++ E++ G  P WLSP+Q  +  +  +   Y 
Sbjct: 526 EYTAADGSRQRPVMIHSAKLGSVERFIGVLTEHYAGAFPAWLSPVQVRLIPVAEAFDGYV 585

Query: 569 QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
           +++A  L+   + +ETD  ++    KIR  S  KIP  +I G ++    ++  R    + 
Sbjct: 586 KDVAAKLRERGVRVETDLSDDRFGKKIRNASKDKIPFTLIAGGEDVEAGAVSFRLRDGSQ 645

Query: 629 TQKVSLLDAIPILT 642
              V++  A+ ++ 
Sbjct: 646 HNGVAVDRAVELIV 659


>gi|328907347|gb|EGG27113.1| threonine--tRNA ligase [Propionibacterium sp. P08]
          Length = 684

 Score =  535 bits (1379), Expect = e-150,   Method: Composition-based stats.
 Identities = 236/674 (35%), Positives = 360/674 (53%), Gaps = 48/674 (7%)

Query: 4   DIKLTFPD-GSIK--NFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
            I +T    G+ +        TG D+  S      +  VA+ ++G + DL   + +G+ +
Sbjct: 2   SISITLHRSGTSRTQQVDTTTTGLDLFGS-----DRAVVAMRVDGNLVDLQRELHDGAEV 56

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           E +       L +IRHS  H+MA+AVQ ++PEV + IGP I DGFYYDF   +P + + L
Sbjct: 57  EPVEATSEDGLNIIRHSATHVMAQAVQQLYPEVNLGIGPFITDGFYYDFGNIEPVTPEVL 116

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIP----------AKE 169
           +++EK+M+ I+  +  F+++  + E ARE  E   + YK+E++ +               
Sbjct: 117 SELEKRMKRIVKENQRFVRRVTTEESARE--ELADQPYKLELIGTKGKGAEGASVEVGGG 174

Query: 170 NVTLY----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
            +T+Y    R GE  W DLCRGPHV ST  +   F L K + AYW+GD     L RIYGT
Sbjct: 175 ELTIYDNVHRNGEVAWKDLCRGPHVPSTKYLANAFALTKFSAAYWKGDQANDQLQRIYGT 234

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISY 282
           AW ++++L  Y   ++E+E+RDHRKL  E+DLF   E+ G G++ +H KG  +   +  +
Sbjct: 235 AWASREDLVAYQQRIKEAERRDHRKLGAELDLFSFPEEIGPGLVVFHPKGAMLRHLIEEH 294

Query: 283 MR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD-------LRTF 334
           +  R ++  +  ++TP++    L+  SGH   Y   MF     D+   +        + +
Sbjct: 295 VVARHMEAGFVFVHTPEITKGGLFHTSGHLPYYADTMFPPMLVDEERDEQGNVTRTGQEY 354

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
            LK MNCP H  +F    +SYRELP+R  E G  YR E SG +HGL R+RGF QDD+H +
Sbjct: 355 YLKAMNCPMHNLIFRSRGRSYRELPLRFFEMGHDYRYEKSGVVHGLTRMRGFAQDDSHTY 414

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP------EKRVGSDALWDDAENIM 448
           CT+EQ   E  K     +SI  DFG     ++LSTR       EK +GSD  W  A + +
Sbjct: 415 CTREQAPGEIKKQIEFFLSILADFGLNDFYLELSTREGGSAKEEKFIGSDEDWQAATDTL 474

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
             V           +      G  AFYGPK    +KDAIGR WQ  TIQ DFN P RF+ 
Sbjct: 475 DQV------CRNTGLQLVSDPGGAAFYGPKVSVQVKDAIGRTWQMSTIQYDFNQPERFDL 528

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYA 568
            Y  +      P+M+H A  GS+ERFIG++ E++ G  P+WLSP+Q  +  +  +  +Y 
Sbjct: 529 EYAAADGTHQRPIMLHSAKLGSVERFIGVLTEHYAGAFPVWLSPVQVRLVPVAEAFNDYV 588

Query: 569 QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
            + A +L+S  + +ETD  ++    KIR  S +K+P ++I G ++A   ++  R    + 
Sbjct: 589 TKFAEVLESRGIRVETDLSSDRFGKKIRNASKEKVPFVLIAGGEDAEAGAVSFRLRDGSQ 648

Query: 629 TQKVSLLDAIPILT 642
              V+  + + I+ 
Sbjct: 649 VNGVARDETVRIIA 662


>gi|313837083|gb|EFS74797.1| threonyl-tRNA synthetase [Propionibacterium acnes HL037PA2]
 gi|314927888|gb|EFS91719.1| threonyl-tRNA synthetase [Propionibacterium acnes HL044PA1]
 gi|314971856|gb|EFT15954.1| threonyl-tRNA synthetase [Propionibacterium acnes HL037PA3]
          Length = 689

 Score =  535 bits (1379), Expect = e-150,   Method: Composition-based stats.
 Identities = 236/674 (35%), Positives = 360/674 (53%), Gaps = 48/674 (7%)

Query: 4   DIKLTFPD-GSIK--NFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
            I +T    G+ +        TG D+  S      +  VA+ ++G + DL   + +G+ +
Sbjct: 7   SISITLHRSGTSRTQQVDTTTTGLDLFGS-----DRAVVAMRVDGNLVDLQRELHDGAEV 61

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           E +       L +IRHS  H+MA+AVQ ++PEV + IGP I DGFYYDF   +P + + L
Sbjct: 62  EPVEATSEDGLNIIRHSATHVMAQAVQQLYPEVNLGIGPFITDGFYYDFGNIEPVTPEVL 121

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIP----------AKE 169
           +++EK+M+ I+  +  F+++  + E ARE  E   + YK+E++ +               
Sbjct: 122 SELEKRMKRIVKENQRFVRRVTTEESARE--ELADQPYKLELIGTKGKGAEGASVEVGGG 179

Query: 170 NVTLY----RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
            +T+Y    R GE  W DLCRGPHV ST  +   F L K + AYW+GD     L RIYGT
Sbjct: 180 ELTIYDNVHRNGEVAWKDLCRGPHVPSTKYLANAFALTKFSAAYWKGDQANDQLQRIYGT 239

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISY 282
           AW ++++L  Y   ++E+E+RDHRKL  E+DLF   E+ G G++ +H KG  +   +  +
Sbjct: 240 AWASREDLVAYQQRIKEAERRDHRKLGAELDLFSFPEEIGPGLVVFHPKGAMLRHLIEEH 299

Query: 283 MR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD-------LRTF 334
           +  R ++  +  ++TP++    L+  SGH   Y   MF     D+   +        + +
Sbjct: 300 VVARHMEAGFVFVHTPEITKGGLFHTSGHLPYYADTMFPPMLVDEERDEQGNVTRTGQEY 359

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
            LK MNCP H  +F    +SYRELP+R  E G  YR E SG +HGL R+RGF QDD+H +
Sbjct: 360 YLKAMNCPMHNLIFRSRGRSYRELPLRFFEMGHDYRYEKSGVVHGLTRMRGFAQDDSHTY 419

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP------EKRVGSDALWDDAENIM 448
           CT+EQ   E  K     +SI  DFG     ++LSTR       EK +GSD  W  A + +
Sbjct: 420 CTREQAPGEIKKQIEFFLSILADFGLNDFYLELSTREGGSAKEEKFIGSDEDWQAATDTL 479

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
             V           +      G  AFYGPK    +KDAIGR WQ  TIQ DFN P RF+ 
Sbjct: 480 DQV------CRNTGLQLVSDPGGAAFYGPKVSVQVKDAIGRTWQMSTIQYDFNQPERFDL 533

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYA 568
            Y  +      P+M+H A  GS+ERFIG++ E++ G  P+WLSP+Q  +  +  +  +Y 
Sbjct: 534 EYAAADGTHQRPIMLHSAKLGSVERFIGVLTEHYAGAFPVWLSPVQVRLVPVAEAFNDYV 593

Query: 569 QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
            + A +L+S  + +ETD  ++    KIR  S +K+P ++I G ++A   ++  R    + 
Sbjct: 594 TKFAEVLESRGIRVETDLSSDRFGKKIRNASKEKVPFVLIAGGEDAEAGAVSFRLRDGSQ 653

Query: 629 TQKVSLLDAIPILT 642
              V+  + + I+ 
Sbjct: 654 VNGVARDETVRIIA 667


>gi|189485254|ref|YP_001956195.1| threonyl-tRNA synthetase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
 gi|170287213|dbj|BAG13734.1| threonyl-tRNA synthetase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
          Length = 598

 Score =  535 bits (1379), Expect = e-150,   Method: Composition-based stats.
 Identities = 263/586 (44%), Positives = 375/586 (63%), Gaps = 16/586 (2%)

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            E  +SL ++RHS AHIMA AV  ++P  +VAIGP IEDGFYYDFD+EQ F+  +L +IE
Sbjct: 21  MEKQKSLDILRHSTAHIMAAAVMELFPGTKVAIGPSIEDGFYYDFDREQAFTPGDLIRIE 80

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           +KM EII  D PF+  Y+   +A + F  K E YK EI   I   + V++YR G + DLC
Sbjct: 81  EKMAEIIKADYPFICSYVPKGEAVKEFREKGEKYKAEIASQI-EDDKVSMYRSGNFTDLC 139

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ STG++K F KL+ +AGAYWRGDS+R  L RIYGTA+ T++++  YL  +EE+ K
Sbjct: 140 RGPHINSTGELKYF-KLLSIAGAYWRGDSSREQLQRIYGTAFLTKKDIDDYLTGIEEAHK 198

Query: 244 RDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
           RDHRKL  ++DLF I E  G G++ WH KG  +   + +Y ++  +++ Y+ ++TP +  
Sbjct: 199 RDHRKLGEDLDLFSIDETVGGGLVLWHPKGALLKDIIENYWKKFHLENGYDLLSTPHIAS 258

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + L++ SGH  +Y  NM+A         + + + +KPMNCP H+ ++   L SYRELPVR
Sbjct: 259 EELFKVSGHLQTYSENMYASMEI-----EGKPYRIKPMNCPMHLMIYKTKLHSYRELPVR 313

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
            AE G+VYR E SG LHGL+RVRGFTQDD H+    EQ+  E L + N+ ++  K FGF 
Sbjct: 314 YAELGTVYRFEKSGVLHGLLRVRGFTQDDGHIIVAPEQLEEEMLGVFNMAVNCLKTFGFN 373

Query: 422 KIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           +  +  +TRPEK  VG    W+ A+N ++  L              +  G GAFYGPK +
Sbjct: 374 EYKIYFATRPEKKYVGEIEYWEKAQNSIENALKKTGCV------YEIDEGGGAFYGPKID 427

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
             +KD IGR WQC T+Q DFNLP RF+ FYVNS  +K  P MIHRA+ GS+ERFIG+++E
Sbjct: 428 IKIKDVIGRLWQCSTLQFDFNLPERFDIFYVNSSGKKARPYMIHRALLGSLERFIGVLLE 487

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           ++ G LPLWLSPIQ  V  I      + + ++  LK +++ +  D RNE I  KIRE+++
Sbjct: 488 HYAGALPLWLSPIQVAVANINEEQRGFCEGLSQELKKNNIRVIFDGRNEKIGRKIRENAM 547

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           +KIP I + G+KE    ++ +R  G+     +S+ + I  + +ES+
Sbjct: 548 QKIPYIAVIGNKEKDACAVAVRARGNRDLGVMSVDNFISFVKEESV 593


>gi|223997660|ref|XP_002288503.1| threonyl-trna synthetase [Thalassiosira pseudonana CCMP1335]
 gi|220975611|gb|EED93939.1| threonyl-trna synthetase [Thalassiosira pseudonana CCMP1335]
          Length = 592

 Score =  535 bits (1379), Expect = e-150,   Method: Composition-based stats.
 Identities = 254/580 (43%), Positives = 350/580 (60%), Gaps = 29/580 (5%)

Query: 81  MAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPF-------------SSDELAQIEKKMQ 127
           MA AVQ  +PE QV IGP I++GFYYDF   +               S  +L  I+K M 
Sbjct: 1   MAMAVQQTFPEAQVTIGPWIDNGFYYDFYFPETTDAETGEAIPSRKLSDQDLKAIKKAMD 60

Query: 128 EIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE-WFDLCRGP 186
           +II  D P +++ +S E+A++  ES  E +K+EIL+SI   E +T+Y  G+ W+DLC GP
Sbjct: 61  KIIGADYPIIREEVSREEAKKRIESINEPFKLEILDSIK-TEPITIYSIGDEWWDLCAGP 119

Query: 187 HVRSTGQ-VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           HV STGQ  KK   L  VAGAYWRGD  R ML RIY TAW   ++L  Y   +EE++KRD
Sbjct: 120 HVESTGQLPKKAIALQSVAGAYWRGDEKREMLQRIYATAWKDPKQLKLYKKRMEEAKKRD 179

Query: 246 HRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQH 303
           HR L +++DLF I ED G G++FWH KG  + + +  + +   I  DY+ + TP + +  
Sbjct: 180 HRVLGKKLDLFSIQEDAGGGLVFWHPKGSTVRRKIEDFWKEAHIAQDYDIVYTPHIANLD 239

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+ SGH+D YR  MF     ++       + +KPMNCP H  +F   ++SYR+LP R  
Sbjct: 240 LWKTSGHYDFYREGMFDQMDVEN-----EVYQIKPMNCPFHCLMFKDSIRSYRDLPFRWG 294

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           E G+VYR E SG+LHGLMRVRGFTQDDAH+FC  EQ+ +E + +  L   I   FGF K 
Sbjct: 295 ELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQLQSEIVDVLKLTKDILSRFGFNKY 354

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            + +STRPEK VGSD +WDDA   + G LD +          G   G GAFYGPK +  +
Sbjct: 355 ELMVSTRPEKSVGSDQIWDDATKALVGALDELG------WEYGTDEGGGAFYGPKIDLKI 408

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           KDAIGR WQC T+Q DFNLP RF+  YV++  +K  P+M+HRA+FGSIERF GI++EN  
Sbjct: 409 KDAIGRTWQCSTVQCDFNLPERFDLEYVSAEGKKERPIMVHRAIFGSIERFFGILVENTA 468

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G+LP WL+P Q  +  +T + V+Y +E+A       L +E D   E +  +IR     +I
Sbjct: 469 GDLPFWLAPTQLKLLPVTDAVVDYCKEVAKKANKMGLRVEVDRGAERLAKQIRNAEQSRI 528

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           P++ + G KE  E ++ +R          ++ D +  L +
Sbjct: 529 PVMAVVGMKEMEEGTLALRSRKLGDLGSFAVDDLLSELKR 568


>gi|158334707|ref|YP_001515879.1| threonyl-tRNA synthetase [Acaryochloris marina MBIC11017]
 gi|158304948|gb|ABW26565.1| threonyl-tRNA synthetase [Acaryochloris marina MBIC11017]
          Length = 606

 Score =  535 bits (1379), Expect = e-150,   Method: Composition-based stats.
 Identities = 233/592 (39%), Positives = 356/592 (60%), Gaps = 16/592 (2%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSD 117
            I +    +   L  IRH+ +H+MA AVQ ++P+ QV IGP IE GFYYDFD   PF+  
Sbjct: 13  KIHLPKTSESEQLKKIRHTTSHVMAMAVQKLFPDAQVTIGPWIESGFYYDFDSPTPFTDK 72

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +L  I+K+M +II +  P  ++ +S E+A++  ++  E YK+EILE +  ++ +TLY  G
Sbjct: 73  DLKAIKKEMVKIIKKKLPVEREEVSREEAKKRIKALGEPYKLEILEDL--EDPITLYHLG 130

Query: 178 E-WFDLCRGPHVRSTGQVKK-FFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
           + W+DLC GPHV ST  +      L  VAGAYWRGD  +  L RIYGTAW T ++L ++ 
Sbjct: 131 DQWWDLCAGPHVESTADLNPKAIALESVAGAYWRGDETKAQLQRIYGTAWETPEQLAEHK 190

Query: 236 YFLEESEKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEE 293
              EE+ +RDHRKL +E+ LF  ++  G G+  W  KG  +   L  ++ + +I+  Y  
Sbjct: 191 RRKEEALRRDHRKLGKELGLFLFSDLVGPGLPLWTPKGTLLRSQLEDFLKQEQIQRGYLG 250

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD-LRTFALKPMNCPGHVAVFNHGL 352
           + TP +    L++ SGHW  Y+ +MF +   +D  +   + F +KPMNCP H+ ++   L
Sbjct: 251 VTTPHIARVDLFKTSGHWQKYQEDMFPLMSENDADRSSEQGFVMKPMNCPFHIQIYKSEL 310

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
           +SYR+LP+RLAEFG+VYR E SG L GL RVRGFT DD+H+F T +Q+ +E LK+ +LI+
Sbjct: 311 RSYRDLPMRLAEFGTVYRYEQSGELGGLTRVRGFTVDDSHLFVTPDQLDDEFLKVVDLIL 370

Query: 413 SIYKDFGFEKIMVKLSTRPEK---RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL 469
           S+++    +    +LS R       +GSD  W+ ++N ++  ++T+     + I      
Sbjct: 371 SVFEKLQLKNFKARLSFRDPDSDKYIGSDEAWEKSQNAIRRAVETLGMEHFEGI------ 424

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG 529
           GE AFYGPK ++I +D + R+WQ GT+QVD+NLP RF+  ++     +  P+MIHRA FG
Sbjct: 425 GEAAFYGPKLDFIFQDVLDREWQLGTVQVDYNLPERFDLEFMGEDGNRQRPIMIHRAPFG 484

Query: 530 SIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE 589
           S+ER IGI+IE + G  PLWL+P Q  + T+    + +AQ +A  L++  + +  D   +
Sbjct: 485 SLERLIGILIEEYAGVFPLWLAPEQVRLLTVNDDHMPFAQAVATDLQAAGIRVSVDQSGD 544

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            +  KIR     KIP++ + GDKE    S+ IR   S     + + +    L
Sbjct: 545 RLGKKIRNAEKAKIPVMSVIGDKEVEAHSLNIRTRASGELGAIPVDEVKQKL 596


>gi|209526622|ref|ZP_03275147.1| threonyl-tRNA synthetase [Arthrospira maxima CS-328]
 gi|209492990|gb|EDZ93320.1| threonyl-tRNA synthetase [Arthrospira maxima CS-328]
          Length = 604

 Score =  535 bits (1377), Expect = e-149,   Method: Composition-based stats.
 Identities = 236/593 (39%), Positives = 354/593 (59%), Gaps = 20/593 (3%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSD 117
            I +        L  IRH+ +H+MA AV  ++P+ QV IGP IE+GFYYDFD  +PF+  
Sbjct: 15  KIHLPKTSQSDQLKRIRHTTSHVMAMAVHKLFPKAQVTIGPWIENGFYYDFDSPEPFTEQ 74

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +L  I+K+M +I+ R  P +++ +S E+A+   E+  E YK+EIL  +   E +T+Y  G
Sbjct: 75  DLKAIKKEMVKILKRKLPVIREEVSREEAQRRIETLGEPYKLEILADL--TEPITIYHLG 132

Query: 178 E-WFDLCRGPHVRSTGQVKK-FFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
           + W+DLC GPHV +TG +     +L  VAGAYWRGD  +  L RIYGTAW T ++L +Y 
Sbjct: 133 DQWWDLCAGPHVETTGDINPKAIELESVAGAYWRGDETKAQLQRIYGTAWETPEQLAEYK 192

Query: 236 YFLEESEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEE 293
              EE+ +RDHR+L +E+ LF  + + G G+  W  KG  +  TL  ++ R +++  Y+ 
Sbjct: 193 RRKEEALRRDHRRLGKELGLFIFSDQVGPGLPLWTPKGTILRTTLEDFLKREQVRRGYQP 252

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           + TP +   +L++ SGHW  YR ++F +        +   F LK MNCP HV ++   L+
Sbjct: 253 VVTPHLGRVNLFKTSGHWQKYREDLFPMMGE----SEDEGFVLKAMNCPFHVQIYKSSLR 308

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYRELP+RLAEFG+VYR E SG L GL RVRGFTQDDAH+F T EQ+ +E LK+ +LI S
Sbjct: 309 SYRELPIRLAEFGTVYRYEQSGELGGLTRVRGFTQDDAHLFVTPEQLDDEFLKVVDLIQS 368

Query: 414 IYKDF----GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL 469
           + K       F+  +       +K +GSD  W+ AEN ++  ++T+       +N    +
Sbjct: 369 VLKKLKLDQSFKARLSFRDPNSDKYIGSDQAWEKAENAIRRAVETLG------MNYFEGI 422

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG 529
           GE AFYGPK ++I++DA+ R+WQ GT+QVD+NLP RF+  YV     +  PVMIHRA FG
Sbjct: 423 GEAAFYGPKLDFIVQDALEREWQLGTVQVDYNLPERFDLEYVAEDGTRQRPVMIHRAPFG 482

Query: 530 SIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE 589
           S+ER IGI+IE + G+ PLWL+P+   +  ++     + + +A   +S  +  E D  ++
Sbjct: 483 SLERLIGILIEEYTGDFPLWLAPVMVRLLPVSDEFFPFVESVAEKWRSLDIRAEADHSHD 542

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +   IR     K+P++ + G KE    S+ IR         +++ +    L 
Sbjct: 543 RLGKMIRNAEKAKVPVMAVVGAKEVESNSLSIRTRALGELGTLTVAETQSRLQ 595


>gi|78212568|ref|YP_381347.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Synechococcus
           sp. CC9605]
 gi|123756917|sp|Q3AKU0|SYT_SYNSC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|78197027|gb|ABB34792.1| threonyl-tRNA synthetase [Synechococcus sp. CC9605]
          Length = 611

 Score =  534 bits (1376), Expect = e-149,   Method: Composition-based stats.
 Identities = 246/586 (41%), Positives = 349/586 (59%), Gaps = 17/586 (2%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           + +    +   L  IRHS +H+MA AVQ ++P+ +V IGP  E GFYYDFD   PF+  +
Sbjct: 23  VVLPKTSESDQLLKIRHSMSHVMAMAVQQLFPKARVTIGPWTETGFYYDFDNPDPFTEAD 82

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG- 177
           L  I+K M +II +  P  +  +S  +A E  +++ E YK+EIL+ +   E +TLY  G 
Sbjct: 83  LKAIKKGMIKIINKKLPLQRVEVSRNEAEEKIKAQNEPYKLEILQGLH--EPITLYTLGE 140

Query: 178 EWFDLCRGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           +W+DLC GPHV  TGQ+  K F+L  +AGAYWRGD  +  L RIYGTAW + ++L ++  
Sbjct: 141 DWWDLCAGPHVDHTGQLNAKAFELESLAGAYWRGDETKAQLQRIYGTAWESPEQLAEHKR 200

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEI 294
             EE+ +RDHR++ +++DLF I ++   G++FWH +G +I   +  + R+   +  YE +
Sbjct: 201 RKEEALRRDHRRIGKDLDLFSIEDEAGAGLVFWHPRGARIRLLIEEFWRQAHFEGGYELL 260

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
            TP V D  LW+ SGH D Y  +MF     D+     R + LKPMNCP HV  +   L+S
Sbjct: 261 YTPHVADISLWKTSGHLDFYAESMFGPMEVDE-----REYQLKPMNCPFHVLTYASKLRS 315

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YRELP+R AE G+VYR E  G +HGLMRVRGFTQDDAHVFC  EQ+ +E LKI +L   I
Sbjct: 316 YRELPIRWAELGTVYRYERPGVMHGLMRVRGFTQDDAHVFCLPEQISDEILKILDLTERI 375

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
              F F    + LSTRPEK +G DA+WD A   +   L+      +      +  G GAF
Sbjct: 376 LSAFDFSNYEINLSTRPEKSIGEDAVWDLATKGLIEALE------RKGWAYKIDEGGGAF 429

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  ++DAIGR WQC TIQ+DFNLP RF   Y+ +   K  P+MIHRA+FGS+ERF
Sbjct: 430 YGPKIDLKIEDAIGRMWQCSTIQLDFNLPERFELDYIAADGSKQRPIMIHRAIFGSLERF 489

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
            GIM EN+ G+ P WL+P Q  +  +T     YA+++ + L    +    D   + +   
Sbjct: 490 FGIMTENYAGDYPFWLAPEQVRLLPVTDEVQPYAEQLLDQLTKAGVRATVDRSGDRLGKL 549

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
           IR     KIP++ + G KEA + ++ +R          ++ D +  
Sbjct: 550 IRTGEQMKIPVLAVIGAKEAEQNAVSLRSRRDGDLGVTAVSDLLSA 595


>gi|306836251|ref|ZP_07469233.1| threonine--tRNA ligase [Corynebacterium accolens ATCC 49726]
 gi|304567843|gb|EFM43426.1| threonine--tRNA ligase [Corynebacterium accolens ATCC 49726]
          Length = 687

 Score =  534 bits (1376), Expect = e-149,   Method: Composition-based stats.
 Identities = 229/639 (35%), Positives = 353/639 (55%), Gaps = 39/639 (6%)

Query: 35  AKKAVAVA-INGKVCDLS-DPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEV 92
            +  V V  ++G + DLS  P  E +   +   +    AVIRHSCAH+MA+AVQ+ +P  
Sbjct: 37  PEAVVVVRGVDGTLYDLSHTPDEESTFVPVAACEEDGRAVIRHSCAHVMAQAVQAEFPGT 96

Query: 93  QVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFES 152
           ++ IGP IE+GFY+DF   +PF+ ++L  +EK+M++II     F +   +   A      
Sbjct: 97  KLGIGPSIENGFYFDFQTAEPFTPEDLKNLEKRMKKIIKGGQRFERHTYA-STAEAEQAL 155

Query: 153 KKEAYKVEILESI----PAKENVTLYRQGE---------------WFDLCRGPHVRSTGQ 193
           + E +K+E+++      P  +       G+               WFDLCRGPHV +T  
Sbjct: 156 QDEPFKLELIQDKGNVDPDSDEAAEVGVGDLTHYDNVNPRTNEVEWFDLCRGPHVPTTKY 215

Query: 194 VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREM 253
           +  F        AYWRGD     L RIYGTA+ ++  L  Y   +EE+EKRDHR+L +E+
Sbjct: 216 IPAFALTRSS-AAYWRGDQANAGLQRIYGTAFESKDALAAYQTMVEEAEKRDHRRLGQEL 274

Query: 254 DLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHW 311
           DLF   ++ GSG   +H  G  +   + ++ R R ++  Y  +NTP +    L+++SGH 
Sbjct: 275 DLFSFPDEIGSGFPVFHPNGATVRMEMENHSRNRHVQAGYSFVNTPHITKGDLFRKSGHL 334

Query: 312 DSYRANMFAVKCADDT-------IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           D Y   MF     D         +K+ + +  KPMNCP H  +F    +SYRELP+RL E
Sbjct: 335 DFYSDGMFPPMQLDGEYDAEGNAVKEPQDYYAKPMNCPMHNLIFASRGRSYRELPLRLFE 394

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FG+VYR E SG +HGL R RGFTQDDAH++CT+EQ+  E  ++ + IIS+ +D+G     
Sbjct: 395 FGTVYRYEKSGVVHGLTRARGFTQDDAHIYCTEEQLEEELTQVLDFIISLLEDYGLSDFY 454

Query: 425 VKLSTRPEK-RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           ++LST+     VGSD +W+ +  I++ V +      +  +         AFYGPK     
Sbjct: 455 LELSTKDPNKFVGSDEIWERSTAILQSVAE------KSGLELVPDPEGAAFYGPKISVQA 508

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +DAIGR WQ  T+Q+DFNLP RF   Y  S   K  P+MIHRA+FGSIERF G+++E++ 
Sbjct: 509 RDAIGRTWQMSTVQLDFNLPERFELEYTASDGTKKRPIMIHRALFGSIERFFGVLLEHYA 568

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P Q +   +    V + + +A  L+   +  + D  ++ +  KIR H+  K+
Sbjct: 569 GAFPAWLAPHQVMGIPVADDFVPHLEGVAAKLRRKGIRADVDTSDDRMQKKIRNHTTGKV 628

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           P +++ G ++A   ++  R    T    V + +A+ +++
Sbjct: 629 PFMLVDGARDAEAGAVSFRFLDGTQVNGVPVDEAVELIS 667


>gi|242309942|ref|ZP_04809097.1| threonyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489]
 gi|239523239|gb|EEQ63105.1| threonyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489]
          Length = 605

 Score =  534 bits (1376), Expect = e-149,   Method: Composition-based stats.
 Identities = 249/616 (40%), Positives = 368/616 (59%), Gaps = 24/616 (3%)

Query: 37  KAVAVAINGKVCDLSDPVREGSIE---IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQ 93
           + +   IN ++ D       G +E   I       SL+++RH+CAH+MAEA++S++PE Q
Sbjct: 3   QIIGFKINSEIYDTQTASELG-LEGTPIYFDNSQESLSIMRHTCAHLMAEAIKSLYPEAQ 61

Query: 94  VAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESK 153
             +GP++E+GFYYDF   Q  S ++L  IE KM+EI  +     K YL  +KA E  + K
Sbjct: 62  FFVGPVVEEGFYYDFRVNQKISEEDLKNIESKMKEIAKKGEKITKYYLPRDKAIE--KFK 119

Query: 154 KEAYKVEILESIPAKE-NVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDS 212
            +  K  ++  IP  +  +++Y QG++ DLCRGPH+  T ++   FKL K+AGAY  GD 
Sbjct: 120 NDDLKQAVISRIPEGDGRLSIYSQGDFEDLCRGPHLP-TLKLLNAFKLTKIAGAYLGGDE 178

Query: 213 NRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRK 271
              ML RIYG A+  ++ L QYL+ +EE++KRDHRK+  EM+LF   E+ G+G+  W  K
Sbjct: 179 KAEMLVRIYGIAFADKESLNQYLHQMEEAKKRDHRKVGTEMELFTFDEEIGAGLPIWLPK 238

Query: 272 GWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G ++ + + + + + + +  YE +  P++L   +W+ SGH+ +Y  NM+       T  D
Sbjct: 239 GSRLRRNIENLLTKALIQRGYEPVRGPEILKSAVWKTSGHYANYGENMYF------TTID 292

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
              + +KPMNC GH+ V+   L+SYRELP+R  E+G V+R+E SG LHGL+RVR FTQDD
Sbjct: 293 GVEYGIKPMNCVGHIKVYQSALRSYRELPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDD 352

Query: 391 AHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKG 450
           AH+FC   Q+  E   I +    I   FGF   M ++STRP+K +GSD +W++A   +K 
Sbjct: 353 AHIFCRPSQIGIEVENIIDFTKKIMDSFGFSYEM-EISTRPQKSIGSDEVWEEATEALKN 411

Query: 451 VLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFY 510
            L+         I   +  G GAFYGPK +  + DAIGR WQCGT+Q+D NLP RF   Y
Sbjct: 412 ALNRCN------IPYKIDEGGGAFYGPKIDIKITDAIGRKWQCGTVQIDMNLPDRFKLEY 465

Query: 511 VNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQE 570
            + ++    PVMIHRA+ GS ERFI I+ E+F G  P +++P QAI+  I  S   YA+E
Sbjct: 466 TDENNSSKQPVMIHRAILGSFERFIAILTEHFGGEFPFFIAPTQAIIIPIGESQESYAKE 525

Query: 571 IANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
           + N L +  +  E D +NET+N +IR    +++P+I+I G KE  ER I IR        
Sbjct: 526 LRNALLNVGVYTEIDNKNETLNKRIRNAEKQRVPMILILGAKEQEERIIAIRDRREKQQF 585

Query: 631 KVSLLDAIPILTKESL 646
            +   + I   +KE +
Sbjct: 586 TMGFDEFI-KFSKEKM 600


>gi|213161901|ref|ZP_03347611.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E00-7866]
          Length = 530

 Score =  534 bits (1375), Expect = e-149,   Method: Composition-based stats.
 Identities = 256/540 (47%), Positives = 362/540 (67%), Gaps = 15/540 (2%)

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTL 173
           + +++  +EK+M E+  ++   +K+ +S  +ARE F  + E+YKV IL E+I   +   L
Sbjct: 1   TQEDVEALEKRMHELAEKNYDVIKKKVSWHEARETFVKRGESYKVSILDENIAHDDKPGL 60

Query: 174 YRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQ 233
           Y   E+ D+CRGPHV +      F KLMK AGAYWRGDSN  ML RIYGTAW  ++ L  
Sbjct: 61  YHHEEYVDMCRGPHVPNMRFCHHF-KLMKTAGAYWRGDSNNKMLQRIYGTAWADKKALNA 119

Query: 234 YLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYE 292
           YL  LEE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF+ L  ++R K+K+  Y+
Sbjct: 120 YLQRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQ 179

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P ++D+ LW+++GHWD+Y+  MF       T  + R + +KPMNCPGHV +FN GL
Sbjct: 180 EVKGPFMMDRVLWEKTGHWDNYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGL 233

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
           KSYR+LP+R+AEFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++ 
Sbjct: 234 KSYRDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQIRDEVNACIRMVY 293

Query: 413 SIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
            +Y  FGFEKI+VKLSTRP+KR+GSD +WD AE  +   L+      ++ I     LGEG
Sbjct: 294 DMYSTFGFEKIVVKLSTRPDKRIGSDEMWDRAEADLAVALE------ENNIPFEYQLGEG 347

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           AFYGPK E+ L D + R WQCGT+Q+DF+LPSR +A YV   +E+  PVMIHRA+ GS+E
Sbjct: 348 AFYGPKIEFTLYDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSME 407

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
           RFIGI+ E F G  P WL+P+Q +V  IT S  EY  E+   L++  + ++ D RNE I 
Sbjct: 408 RFIGILTEEFAGFFPTWLAPVQVVVMNITDSQSEYVNELTQKLQNAGIRVKADLRNEKIG 467

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           +KIREH+++++P +++CGDKE     + +R         + + D I  L +E      Q+
Sbjct: 468 FKIREHTLRRVPYMLVCGDKEVEAGKVAVRTRRGKDLGSLDVNDVIEKLQQEIRSRSLQQ 527


>gi|213623005|ref|ZP_03375788.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-2068]
          Length = 523

 Score =  533 bits (1373), Expect = e-149,   Method: Composition-based stats.
 Identities = 262/539 (48%), Positives = 371/539 (68%), Gaps = 19/539 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D SD +  + ++
Sbjct: 1   MPV---ITLPDGSQRHYDHPVSPMDVALDIGPGLAKATIAGRVNGELVDASDLIENDATL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L +IRHSCAH++  A++ +WP  ++AIGP++++GFYYD D ++  + +++
Sbjct: 58  SIITAKDEEGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVVDNGFYYDVDLDRTLTQEDV 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M E+  ++   +K+ +S  +ARE F  + E+YKV IL E+I   +   LY   E
Sbjct: 118 EALEKRMHELAEKNYDVIKKKVSWHEARETFVKRGESYKVSILDENIAHDDKPGLYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KLMK AGAYWRGDSN  ML RIYGTAW  ++ L  YL  L
Sbjct: 178 YVDMCRGPHVPNMRFCHHF-KLMKTAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF+ L  ++R K+K+  Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW+++GHWD+Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 297 FMMDRVLWEKTGHWDNYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  
Sbjct: 351 LPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQIRDEVNACIRMVYDMYST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFEKI+VKLSTRP+KR+GSD +WD AE  +   L+      ++ I     LGEGAFYGP
Sbjct: 411 FGFEKIVVKLSTRPDKRIGSDEMWDRAEADLAVALE------ENNIPFEYQLGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           K E+ L D + R WQCGT+Q+DF+LPSR +A YV   +E+  PVMIHRA+ GS+ERFIG
Sbjct: 465 KIEFTLYDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIG 523


>gi|152989860|ref|YP_001355582.1| threonyl-tRNA synthetase [Nitratiruptor sp. SB155-2]
 gi|151421721|dbj|BAF69225.1| threonyl-tRNA synthetase [Nitratiruptor sp. SB155-2]
          Length = 613

 Score =  533 bits (1372), Expect = e-149,   Method: Composition-based stats.
 Identities = 246/616 (39%), Positives = 373/616 (60%), Gaps = 20/616 (3%)

Query: 37  KAVAVAINGKVCDLSDPVR-----EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE 91
             +A+  +G++ DL          E + +I    +P +L VIRHS AH+MA+A++ ++P+
Sbjct: 2   DPIAIEKDGEILDLQTAQAKNIDIESAKKIYPENNPEALEVIRHSTAHLMAQAIKELYPD 61

Query: 92  VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFE 151
            +  +GP++++GFYYDF   Q  S ++L +IEKKMQEI  R     +  +   +A E F+
Sbjct: 62  AKFFVGPVVDEGFYYDFRTSQKISEEDLPKIEKKMQEIAKRKLDITRYEIPKSEAIEKFK 121

Query: 152 SKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGD 211
              +  K E+L+SIP+   V++Y+QG++ DLCRGPHV +T  +K F KL +VAGAY  GD
Sbjct: 122 E--DDLKQEVLKSIPSD-VVSIYKQGDFEDLCRGPHVPNTKYLKHF-KLTRVAGAYLGGD 177

Query: 212 SNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHR 270
             + ML+RIYG A+  ++ L  YL  +EE++KRDHRKL  EM+LF  +E+   G+  W  
Sbjct: 178 ETKEMLTRIYGVAFADKKSLKDYLTMIEEAKKRDHRKLGSEMELFMFSEEVGAGLPIWLP 237

Query: 271 KGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
           KG ++   L S +     K  YE +  P++L   LW++SGH+ +Y+ NM+  +  DD  K
Sbjct: 238 KGARLRSKLESLLFAAHRKRGYEPVRGPEILKSDLWKKSGHYQNYKENMYFTEICDDETK 297

Query: 330 DLR--TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
                 + +KPMNC GH+ ++    +SYRELP++  E+G V+R+E SG LHGL RVR FT
Sbjct: 298 KETCVEYGIKPMNCVGHIMIYKSKKRSYRELPLKFFEYGVVHRHEKSGVLHGLFRVREFT 357

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENI 447
           QDDAH+FC  EQ+ +  +++   +  I + F F+  M ++ST+P+K +G DA+W+ A   
Sbjct: 358 QDDAHIFCKPEQIKDIVIEVLGFVDEIMRSFNFKYEM-EISTKPKKAIGDDAIWEIATQA 416

Query: 448 MKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFN 507
           +K  LD   +        G+  G GAFYGPK +  + DAIGR WQCGTIQVDFNLP RF 
Sbjct: 417 LKEALDENGH------EYGIDEGGGAFYGPKIDIKITDAIGRKWQCGTIQVDFNLPERFE 470

Query: 508 AFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEY 567
             + +S +    PVMIHRA+ GS ERFIGI+IE++ G  P +++P Q I   I  S V Y
Sbjct: 471 LEFTDSDNSAKRPVMIHRAILGSFERFIGILIEHYAGEFPFFIAPTQIIFVPIADSHVAY 530

Query: 568 AQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGST 627
           A+E+ + L    +  E     +++N +IR    +K+P++ I GDKE   +S+ IR     
Sbjct: 531 AKELQDKLLQMDVDSEIYDSKDSLNKRIRNAEKQKVPMVAIIGDKEVESKSLAIRDRREK 590

Query: 628 TTQKVSLLDAIPILTK 643
           T   ++  +    + +
Sbjct: 591 TQYNITESEFFTKIKE 606


>gi|113954220|ref|YP_731070.1| threonyl-tRNA synthetase [Synechococcus sp. CC9311]
 gi|123031674|sp|Q0I902|SYT_SYNS3 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|113881571|gb|ABI46529.1| threonyl-tRNA synthetase [Synechococcus sp. CC9311]
          Length = 617

 Score =  533 bits (1372), Expect = e-149,   Method: Composition-based stats.
 Identities = 250/593 (42%), Positives = 352/593 (59%), Gaps = 17/593 (2%)

Query: 51  SDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK 110
           + P     + +    +  +L  IRHS +H+MA AVQ ++P+ QV IGP  E GFYYDFD 
Sbjct: 15  TTPAPIAPVVLPKTSESENLLKIRHSMSHVMAMAVQKLFPKAQVTIGPWTEAGFYYDFDN 74

Query: 111 EQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN 170
            +PF+  +L  I+K+M +II R  P  +  +S E+A    +++ E YK+EILE +   E 
Sbjct: 75  PEPFTEADLKAIKKEMGKIIGRKLPLERIEVSREEAERRIKAQNEPYKLEILERLV--EP 132

Query: 171 VTLYRQGE-WFDLCRGPHVRSTGQVKK-FFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQ 228
           +TLY  GE W+DLC GPHV +T ++    F+L  VAGAYWRGD  +  L RIYGTAW T 
Sbjct: 133 ITLYTLGEQWWDLCAGPHVANTSELNPKAFELESVAGAYWRGDETKAQLQRIYGTAWETA 192

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-K 286
            +L+++    EE+ +RDHR+L +++DLF I ++   G++FWH +G ++   +  + R+  
Sbjct: 193 DQLSEHKRRKEEALRRDHRRLGKDLDLFSIEDEAGAGLVFWHPRGARMRLLIEDFWRQAH 252

Query: 287 IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA 346
            +  YE + TP V D  LW+ SGH D Y  +MF     D+     R + LKPMNCP HV 
Sbjct: 253 FEGGYELLYTPHVADISLWKTSGHLDFYAESMFGPMEVDE-----RQYQLKPMNCPFHVL 307

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
            +   L+SYRELP+R AE G+VYR E  G +HGLMRVRGFTQDDAHVFC  EQ+ +E L+
Sbjct: 308 TYASKLRSYRELPIRWAELGTVYRYERPGVMHGLMRVRGFTQDDAHVFCLPEQISDEILR 367

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           I NL   I   F F    + LST+P+K +G DA+W+ A   +   L       +      
Sbjct: 368 ILNLTERILSTFDFSNYEINLSTKPDKAIGDDAVWELATKGLIEALK------RKGWAYK 421

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
           +  G GAFYGPK +  ++DAIGR WQC TIQ+DFNLP RF   Y+ +   K  P+MIHRA
Sbjct: 422 IDEGGGAFYGPKIDLKIEDAIGRMWQCSTIQLDFNLPERFELDYIAADGSKQRPIMIHRA 481

Query: 527 VFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF 586
           +FGS+ERF GIM EN+ G+ P WL+P Q  +  +T   + YA+E  N LK+  +    D 
Sbjct: 482 IFGSLERFFGIMTENYAGDFPFWLAPEQIRLLPVTDEVLGYAEEFQNQLKAAGIRASIDR 541

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
             + +   IR     KIP++ + G KEA + +  +R         ++    I 
Sbjct: 542 SGDRLGKLIRIGEKMKIPVLAVIGAKEAEQGAASLRSRRDGDLGVITKERLIA 594


>gi|172038860|ref|YP_001805361.1| threonyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
 gi|171700314|gb|ACB53295.1| threonyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
          Length = 608

 Score =  533 bits (1372), Expect = e-149,   Method: Composition-based stats.
 Identities = 239/593 (40%), Positives = 359/593 (60%), Gaps = 16/593 (2%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           I++    +   L  IRH+ +H+MA AVQ ++P+ QV IGP  E GFYYDFD  +PF+  +
Sbjct: 16  IKLPRTSESDKLKRIRHTASHVMAMAVQKLFPKAQVTIGPWTETGFYYDFDVPEPFTDKD 75

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L  I+K+M +II +  P +++ +S E+A++     +E YK+EILE +  +  +TLY  G+
Sbjct: 76  LKAIKKEMIKIIKKKLPLIREEVSAEEAKKRITELQEPYKLEILEGL--EPPITLYHLGD 133

Query: 179 -WFDLCRGPHVRSTGQVKK-FFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
            W+DLC GPHV +TG +    F +  VAGAYWRGD  +  L RIYGTAW T ++L +Y  
Sbjct: 134 QWWDLCAGPHVETTGDLNPKAFDIESVAGAYWRGDETKAQLQRIYGTAWETPEQLAEYKR 193

Query: 237 FLEESEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEI 294
             EE+ KRDHR+L +E+ LF  +   G G+  W  KG  I  TL  ++ + ++K  Y  +
Sbjct: 194 RKEEALKRDHRRLGKELGLFIFSDPVGPGLPLWTPKGTIIRSTLEDFLKQEQLKRGYLPV 253

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT-FALKPMNCPGHVAVFNHGLK 353
            TP +    L++ SGHW +Y+ +MF +    +  K     F LKPMNCP H+ ++   L+
Sbjct: 254 VTPHIGRVDLFKISGHWQNYKEDMFPMMAETEEAKTSEMGFVLKPMNCPFHIQIYKSELR 313

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYR+LP+RLAEFG+VYR E SG L GL RVRGFT DD+H+F T +Q+ +E L + +LI+S
Sbjct: 314 SYRDLPMRLAEFGTVYRYEQSGELGGLTRVRGFTVDDSHLFVTPDQLDDEFLNVVDLILS 373

Query: 414 IYKDFGFEKIMVKLSTRPEK---RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
           +++    +    +LS R       +GS+  W+ AEN ++  + T++      ++     G
Sbjct: 374 VFRSLQLKNFKARLSFRDPNSDKYIGSNEAWNKAENAIRRAVQTLE------MDYFEAEG 427

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           E AFYGPK ++I +DA+ R+WQ GT+QVD+NLP RF   YV     +  PVMIHRA FGS
Sbjct: 428 EAAFYGPKLDFIFQDALEREWQLGTVQVDYNLPERFELEYVGEEGNRHRPVMIHRAPFGS 487

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
           +ER IGI+IE + G+ PLWL+P Q  +  ++   ++Y +++AN + S  +  E D   E 
Sbjct: 488 LERLIGILIEEYAGDFPLWLAPTQVRLLPVSDVQLDYVKDVANKMLSLGIRAEADTSGER 547

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +   IR    +KIP++ I G KE    ++ IR   S     +++ + I  L  
Sbjct: 548 LGKMIRNGEKQKIPVMAIVGAKEVEANALSIRTRASGELGTMAVDEVIEKLND 600


>gi|57234472|ref|YP_181487.1| threonyl-tRNA synthetase [Dehalococcoides ethenogenes 195]
 gi|123759710|sp|Q3Z8G2|SYT_DEHE1 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|57224920|gb|AAW39977.1| threonyl-tRNA synthetase [Dehalococcoides ethenogenes 195]
          Length = 582

 Score =  533 bits (1372), Expect = e-149,   Method: Composition-based stats.
 Identities = 247/576 (42%), Positives = 356/576 (61%), Gaps = 18/576 (3%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           L ++RHS AHIMAEAV S++PE ++ IGP I+ GFYYDFD  +  + ++L +IE +M ++
Sbjct: 14  LEIMRHSAAHIMAEAVLSMFPEAKLGIGPAIDTGFYYDFDLPRTLTPEDLPEIETRMNQL 73

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
           +  + PF ++ +S ++AR+L     + YK+E+L+ IP  E V++YRQG   DLCRGPHV 
Sbjct: 74  VKANLPFRREEMSKDEARKL--FADQPYKLELLDDIP-DEIVSVYRQGNLCDLCRGPHVN 130

Query: 190 STGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKL 249
            T +VK F KL+ +AGAYWRGD  RPML RIYG A+  +  L +YL  LEES KRDHRKL
Sbjct: 131 YTSKVKAF-KLLSIAGAYWRGDEKRPMLQRIYGAAFLDKASLAEYLNMLEESAKRDHRKL 189

Query: 250 AREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQ 307
            +E++LF + ++ G G++ W   G  +   +  + +   +K  Y  + TP +    LW+ 
Sbjct: 190 GKELELFSLHQEIGGGLVNWLPNGAIVRHLIEEFWKKEHLKRGYSLVYTPHIAKVDLWKT 249

Query: 308 SGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGS 367
           SGHW  YR NM++         D   + LKPMNC  H+ +F +  +SY+ELP+R+AE G+
Sbjct: 250 SGHWGFYRENMYSPMDI-----DGEEYVLKPMNCVYHILMFKNRTRSYKELPIRMAELGT 304

Query: 368 VYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKL 427
           VYR E SG LHGL RVRGFTQDDAH+FC  EQ+  E +K+ +L   +   FGF +  V L
Sbjct: 305 VYRYERSGVLHGLSRVRGFTQDDAHIFCLYEQLEKEVVKVLDLAKFMIDTFGFTRYKVML 364

Query: 428 STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAI 487
           STRPEK VG    W+ A +I+   L++      ++I   V  GEG FYGPK +   +DA+
Sbjct: 365 STRPEKYVGELDKWEYATDILAKALES------NQIAYQVDPGEGVFYGPKIDIKFEDAL 418

Query: 488 GRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           GR WQ  TIQVDF LP RF+   V    +     M+HR V GS+ERF+  + E + G  P
Sbjct: 419 GRAWQGPTIQVDFQLPERFDVSVVGEDGKDQPVAMVHRTVLGSMERFMSCLTEQYGGAFP 478

Query: 548 LWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIII 607
           +WLSP Q ++  I     E+A+++A  L+   + +E D R+ET+N KIR+  + KIP ++
Sbjct: 479 VWLSPKQVMLIPIADRHSEFAEKLACELREEEVRVEVDNRSETMNQKIRQAQLAKIPYML 538

Query: 608 ICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           + GDKE   +S+ IR   S +   +   +   +L  
Sbjct: 539 VVGDKEIETQSVSIRTR-SGSQCVMPFAEFKSMLID 573


>gi|315639344|ref|ZP_07894506.1| threonine--tRNA ligase [Campylobacter upsaliensis JV21]
 gi|315480670|gb|EFU71312.1| threonine--tRNA ligase [Campylobacter upsaliensis JV21]
          Length = 602

 Score =  533 bits (1372), Expect = e-149,   Method: Composition-based stats.
 Identities = 241/612 (39%), Positives = 373/612 (60%), Gaps = 19/612 (3%)

Query: 34  LAKKAVAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQ 93
           + K+ +A   NG + D          ++       +L V+RHSCAH+MA+A+++++PE +
Sbjct: 1   MEKEIIAYQNNGVLIDTQSATNLDFEKVYFDNSKEALEVLRHSCAHLMAQAIKALYPEAK 60

Query: 94  VAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESK 153
             +GP+IEDGFYYDF      + ++L +IEKKM+E         K  LS ++A E  + K
Sbjct: 61  FFVGPVIEDGFYYDFRVNSKLNEEDLIKIEKKMKEFAEAKLEIQKYTLSKQEALE--KFK 118

Query: 154 KEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSN 213
            +  K E+L  IP+ E V++Y+QGE+ DLCRGPH  +T  ++ FFKL ++AGAY  GD  
Sbjct: 119 DDDLKQEVLAKIPSDE-VSIYKQGEFEDLCRGPHAPNTKFLR-FFKLTRIAGAYLGGDEK 176

Query: 214 RPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKG 272
           R ML+RIYGTA+  ++ L +YL+ +EE++KRDHRKL  E+ LF    + G G+  W   G
Sbjct: 177 REMLTRIYGTAFADKESLKEYLHIIEEAKKRDHRKLGNELKLFTFDEQIGGGLPIWLSNG 236

Query: 273 WKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
            ++   L   + +      YE +  P++L    W+ SGH+ +Y+ NM+       T  D 
Sbjct: 237 ARLRSKLEQMLYKIHRLRGYEPVRGPELLKAEAWKISGHYANYKENMYF------TNIDE 290

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
           + + +KPMNC GH+ ++ + ++SYR+LP++  E+G V+R+E SG LHGL RVR FTQDDA
Sbjct: 291 QEYGIKPMNCVGHIKIYQNEVRSYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFTQDDA 350

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
           H+FC   Q+  + L+I + + S+ K F FE  M ++STRPEK +G +A+W+ A   +K  
Sbjct: 351 HIFCMPSQIKEQVLEILDFVASLMKIFDFEYEM-EISTRPEKAIGDEAIWEVATKALKEA 409

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
           LD      +  +  G+  G GAFYGPK +  + DA+ R WQCGTIQVDFNLP RF   Y 
Sbjct: 410 LD------EQGLKYGIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDFNLPERFELEYT 463

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
           +S + K  PVM+HRA+ GS ERFIGI+ E+  G  P +++P Q  +  I+   + YA+ I
Sbjct: 464 SSENAKERPVMLHRAILGSFERFIGILTEHCAGEFPFFIAPTQVGIVPISEVHLAYAKGI 523

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
              L    +  E   +NE+++ KIR    +K+P+I++ GD+E S R++ +R   +   + 
Sbjct: 524 QRTLLEMGVDSEIYDKNESLSKKIRNAEKQKLPMILVIGDEELSNRAVALRDRRAKEQKS 583

Query: 632 VSLLDAIPILTK 643
           +SL + + ++ +
Sbjct: 584 LSLDEFMNLIKE 595


>gi|255327209|ref|ZP_05368284.1| threonine--tRNA ligase [Rothia mucilaginosa ATCC 25296]
 gi|255295827|gb|EET75169.1| threonine--tRNA ligase [Rothia mucilaginosa ATCC 25296]
          Length = 677

 Score =  533 bits (1372), Expect = e-149,   Method: Composition-based stats.
 Identities = 241/664 (36%), Positives = 359/664 (54%), Gaps = 51/664 (7%)

Query: 12  GSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSL 70
           G  +           A+        K V   +NG + DLS  +  G S+E +   +P  L
Sbjct: 15  GEEREVTAKTAAELFADD------PKIVVARVNGVLVDLSHELSAGDSVEPVFIHEPDGL 68

Query: 71  AVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEII 130
            V+RHS AH+MA+AVQ    + ++ IGP I DGFY+DFD  +PF+ ++L +IEK M +II
Sbjct: 69  NVLRHSAAHVMAQAVQEYRKDAKLGIGPYITDGFYFDFDVAEPFTPEDLKKIEKSMIKII 128

Query: 131 ARDSPFLKQYLSHEKARELFESKKEAYKVEILE----------------SIPAKENVTLY 174
                F ++ ++H++A    E   E YK+E+L                     +  +T+Y
Sbjct: 129 KSGQLFRRRVVTHDEAVA--EMANEPYKLELLSLTQGPGSGADAAEGASVEVGEGEITIY 186

Query: 175 R-------QGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNT 227
                   +  W DLCRGPH+ +T  +   + LM+  GAYWRG    PML RIYGTAW T
Sbjct: 187 DNVHPKTGETVWKDLCRGPHLPNTKLIANGYALMRAGGAYWRGSEKNPMLQRIYGTAWPT 246

Query: 228 QQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-R 285
           + EL  Y   + E+E+RDHR+L RE+DLF   ++ G G+   H KG  I + +  Y+R R
Sbjct: 247 KDELVAYKERIAEAERRDHRRLGRELDLFSFPKNIGPGLPVIHPKGGVIKREMEDYVRTR 306

Query: 286 KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            I++ ++ ++TP +  + L+  SGH   Y   MF     D+       + LK MNCP H 
Sbjct: 307 HIQEGFQYVSTPHISKEDLFYTSGHLPYYADGMFPPMELDNGH-----YRLKAMNCPMHN 361

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            ++    +SYRELP+R  EFG+VYR+E SG L GL RVR  TQDD+H + TKEQ  +E  
Sbjct: 362 EIYRSRGRSYRELPLRFFEFGTVYRDEKSGVLQGLTRVRMITQDDSHSYVTKEQAPDEVR 421

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRP------EKRVGSDALWDDAENIMKGVLDTIKNSS 459
            +   ++S+ +DFG     ++LSTR       +K +G+D  W+ A  +++ V        
Sbjct: 422 HLLKFMLSLLEDFGMTDFYLELSTRDTEGDKKDKFIGTDEQWEAATAVLEQVAKETG--- 478

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
              +      G  AFYGPK     KDAIGR WQ  T+Q DFN PSRF   Y  +      
Sbjct: 479 ---LELVPDPGGAAFYGPKISVQAKDAIGRTWQMSTVQYDFNQPSRFGLEYQAADGTVQE 535

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH 579
           PVMIH A FGSIERF+G++ E++ G  P WL+P+Q I   +  +  +Y  EIA+ L++H 
Sbjct: 536 PVMIHSAKFGSIERFLGVLTEHYAGAFPAWLAPVQVIGVPVAEAFNDYMTEIADKLRAHG 595

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
           + +E D+ ++    KIR  S +K+P I+I G ++A   ++  R  G+     V + +A+ 
Sbjct: 596 VRVEVDYGSDRFTKKIRTASTEKVPFILIAGGEDAEHGAVSFRFRGNKQENGVPVDEAVA 655

Query: 640 ILTK 643
            + +
Sbjct: 656 RIVE 659


>gi|126657277|ref|ZP_01728443.1| threonyl-tRNA synthetase [Cyanothece sp. CCY0110]
 gi|126621548|gb|EAZ92259.1| threonyl-tRNA synthetase [Cyanothece sp. CCY0110]
          Length = 607

 Score =  532 bits (1371), Expect = e-149,   Method: Composition-based stats.
 Identities = 244/599 (40%), Positives = 362/599 (60%), Gaps = 16/599 (2%)

Query: 53  PVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ 112
            V E  I++    +   L  IRH+ +H+MA AVQ ++P+ QV IGP  E GFYYDFD  +
Sbjct: 9   EVLEQPIKLPRTSESDKLKRIRHTASHVMAMAVQKLFPKAQVTIGPWTETGFYYDFDVPE 68

Query: 113 PFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVT 172
           PF+  +L  I+K+M +II +  P  ++ +S E+A++     +E YK+EILE +  +  +T
Sbjct: 69  PFTDKDLKAIKKEMIKIIKKKLPLTREEVSAEEAKKRITELQEPYKLEILEGL--EPPIT 126

Query: 173 LYRQGE-WFDLCRGPHVRSTGQVKK-FFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQE 230
           LY  G+ W+DLC GPHV +TG +    F++  VAGAYWRGD  +  L RIYGTAW T ++
Sbjct: 127 LYHLGDQWWDLCAGPHVETTGDLNPKAFEIESVAGAYWRGDETKAQLQRIYGTAWETPEQ 186

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYMR-RKIK 288
           L +Y    EE+ KRDHR+L +E+ LF  +   G G+  W  KG  I  TL  +++  ++K
Sbjct: 187 LAEYKRRKEEALKRDHRRLGKELGLFIFSDPVGPGLPLWTPKGTIIRSTLEDFLKQEQLK 246

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT-FALKPMNCPGHVAV 347
             Y  + TP +    L++ SGHW +Y+ +MF +   ++  K     F LKPMNCP H+ +
Sbjct: 247 RGYLPVVTPHIGRVDLFKISGHWQNYKEDMFPMMAENEEAKTSEMGFVLKPMNCPFHIQI 306

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
           +   L+SYR+LP+RLAEFG+VYR E SG L GL RVRGFT DD+H+F T +Q+ +E L +
Sbjct: 307 YKSELRSYRDLPMRLAEFGTVYRYEQSGELGGLTRVRGFTVDDSHLFVTPDQLDDEFLNV 366

Query: 408 HNLIISIYKDFGFEKIMVKLSTRPEK---RVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            +LI+S+++    +    +LS R       +GS+  W+ AEN ++  + T+       +N
Sbjct: 367 VDLILSVFRSLQLKNFKARLSFRDPNSDKYIGSNEAWNKAENAIRRAVQTL------DMN 420

Query: 465 TGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIH 524
                GE AFYGPK ++I +DA+ R+WQ GT+QVD+NLP RF   YV     +  PVMIH
Sbjct: 421 YFEAEGEAAFYGPKLDFIFQDALEREWQLGTVQVDYNLPERFELEYVGEEGNRHRPVMIH 480

Query: 525 RAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIET 584
           RA FGS+ER IGI+IE + G+ PLWL+PIQ  +  ++   ++Y ++IAN + S  +  E 
Sbjct: 481 RAPFGSLERLIGILIEEYAGDFPLWLAPIQVRLLPVSDVQLDYVKDIANKMLSLGIRAEA 540

Query: 585 DFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           D   E +   IR    +KIP++ I G KE    ++ IR   S     +++ + I  L  
Sbjct: 541 DTSGERLGKMIRNGEKQKIPVMAIVGAKEVEANALSIRTRASGELGTMAVDEVIEKLRD 599


>gi|157165430|ref|YP_001465955.1| threonyl-tRNA synthetase [Campylobacter concisus 13826]
 gi|171855003|sp|A7ZAZ7|SYT_CAMC1 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|112801821|gb|EAT99165.1| threonyl-tRNA synthetase [Campylobacter concisus 13826]
          Length = 606

 Score =  532 bits (1371), Expect = e-149,   Method: Composition-based stats.
 Identities = 245/617 (39%), Positives = 382/617 (61%), Gaps = 25/617 (4%)

Query: 37  KAVAVAINGKVCDLSDPV-REGSIEIITPE-DPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
             +A  +NG++ D      RE S E I  +    +L VIRHSCAH+MA+A++S++P+ + 
Sbjct: 3   DIIAYKLNGEIVDTQSIAGRESSAEPIYFDNSKEALHVIRHSCAHLMAQAIKSLYPKAKF 62

Query: 95  AIGPIIEDGFYYDFDKEQPFS---SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFE 151
            +GP +EDGFYYDF  +   +     +LA IE KM+E+  +    +K   +   A    +
Sbjct: 63  FVGPNVEDGFYYDFRVDDEGTKLGESDLAAIEDKMKELAEKKFDIVKTCSTK--ANMSEK 120

Query: 152 SKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGD 211
            K +  K E+L+ IP  E V+ Y QG++ DLCRGPH+ +T  +K FFKL +VAGAY  GD
Sbjct: 121 FKNDDLKQEVLKRIPDGE-VSSYAQGDFEDLCRGPHLPNTKFLK-FFKLTRVAGAYLGGD 178

Query: 212 SNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHR 270
            +R ML+RIYGTA+  ++ L +++  +EE++KRDHRKL  EM LF   E+ G G+  W  
Sbjct: 179 ESREMLTRIYGTAYADKESLKEHIRIIEEAKKRDHRKLGVEMKLFTFDEEVGGGLPIWLP 238

Query: 271 KGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
            G ++   L   + +      YE +  P++L   +W++SGH+ +Y+ NM+       T  
Sbjct: 239 NGGRLRSKLEQLLYKAHRDRGYEPVRGPELLKADVWRRSGHYANYKENMYF------TTI 292

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
           D   + +KPMNC GH+ V+   ++SYR+LP++  E+G V+R+E SG LHGL RVR F QD
Sbjct: 293 DETEYGIKPMNCVGHIKVYQSDIRSYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFAQD 352

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMK 449
           D+H+FC   Q+    L+I     +I ++FGF   M ++ST+P K +G D +WD A   +K
Sbjct: 353 DSHIFCMPSQIKENILEILKFAGTIMENFGFHYEM-EISTKPAKAIGGDEIWDTATKALK 411

Query: 450 GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAF 509
             LD      ++    G+  G GAFYGPK +  + DA+ R WQCGTIQVDFNLP RF+  
Sbjct: 412 EALD------ENGFKYGIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDFNLPERFDLG 465

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQ 569
           Y+++++E+  PVM+HRA+ GS ERFIGI++E+  G LP +++P Q ++  I+ + ++YA+
Sbjct: 466 YIDANNERQRPVMLHRALLGSFERFIGILLEHTAGELPFFIAPTQVVIVPISDAHLDYAK 525

Query: 570 EIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           EI+  L+  ++  E   +NE++N +IR    +++P+I++ GD E + +S+ +R   + T 
Sbjct: 526 EISRELRKINVDSEIASKNESLNKRIRTAEKQRVPMIVVLGDNEVANKSVALRDRQARTQ 585

Query: 630 QKVSLLDAIPILTKESL 646
             +SL + +  LTKE L
Sbjct: 586 SDMSLAEFVN-LTKEKL 601


>gi|237752912|ref|ZP_04583392.1| threonyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430]
 gi|229375179|gb|EEO25270.1| threonyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430]
          Length = 605

 Score =  532 bits (1371), Expect = e-149,   Method: Composition-based stats.
 Identities = 244/615 (39%), Positives = 370/615 (60%), Gaps = 22/615 (3%)

Query: 37  KAVAVAINGKVCDLSDPVREG-SIEIITPE-DPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           + + +  N  + D       G S E I  +    +L+++RH+CAH+MAEA+++++PE Q 
Sbjct: 3   QIIGIKANSAIYDTQSAEELGISGEPIYFDNSEDALSIMRHTCAHLMAEALKALYPEAQF 62

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            +GP++E+GFYYDF      S ++L++IE KM+EI  +     K YL+ E+A +  + + 
Sbjct: 63  FVGPVVEEGFYYDFRVNHKISEEDLSKIEAKMKEIAKKGEKITKYYLTREEAIQ--KFQN 120

Query: 155 EAYKVEILESIP-AKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSN 213
           +  K  ++  IP     +++Y QGE+ DLCRGPH+  T ++   FKL KVAGAY  GD  
Sbjct: 121 DDLKQAVISRIPLGDGRLSIYAQGEFEDLCRGPHLP-TLKLLNAFKLTKVAGAYLGGDEK 179

Query: 214 RPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKG 272
             ML+RIYG A+  ++ LTQYL+ LEE++KRDHRK+  EM+LF   E+   G+  W  KG
Sbjct: 180 AEMLTRIYGIAFADKESLTQYLHQLEEAKKRDHRKVGVEMELFTFDEEVGAGLPIWLPKG 239

Query: 273 WKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
            ++ + L + + + + +  YE +  P++L   +W+ SGH+ +Y  NM+       T  D 
Sbjct: 240 ARLRRNLENLLTQALIERGYEPVRGPEILKSAVWKTSGHYANYGENMYF------TTIDE 293

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
             + +KPMNC GH+ V+ + L SYRELP+R  E+G V+R+E SG LHGL+RVR FTQDDA
Sbjct: 294 VEYGIKPMNCVGHIKVYQNSLHSYRELPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDA 353

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
           H+FC   Q+ +E   I +    I   FGF   M ++ST+PEK +GS+ +W++A   +KG 
Sbjct: 354 HIFCRPSQIASEVESIIDFTQKIMNAFGFSYEM-EISTKPEKSIGSEEVWEEATQALKGA 412

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
           L+         I   +  G GAFYGPK +  + DAIGR WQCGT+Q+D NLP RF   Y 
Sbjct: 413 LERCG------IAYKIDEGGGAFYGPKIDIKITDAIGRKWQCGTVQIDMNLPERFALTYT 466

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
           + ++    PVMIHRA+ GS ERF+ I+ E+F G  P +++P Q I+  I+ +   YA+E+
Sbjct: 467 DENNSTQQPVMIHRAILGSFERFVAILTEHFGGEFPFFVAPTQVIIIPISEAQYNYAKEL 526

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
            N L    +  E + +NET+N +IR    +++P+I + G KE  ER + +R         
Sbjct: 527 HNALLKVGVYAEIENKNETLNKRIRNAEKQRVPMIAVLGAKEKEERLVAVRDRRLKEQSN 586

Query: 632 VSLLDAIPILTKESL 646
           +S    I  LTKE +
Sbjct: 587 MSFESFI-TLTKEKM 600


>gi|254444928|ref|ZP_05058404.1| threonyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235]
 gi|198259236|gb|EDY83544.1| threonyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235]
          Length = 610

 Score =  532 bits (1370), Expect = e-149,   Method: Composition-based stats.
 Identities = 235/593 (39%), Positives = 350/593 (59%), Gaps = 32/593 (5%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           L  IRHS +H++A AV  ++P+ ++ IGP  + GFYYDFD E  F++D+L +IE +M+++
Sbjct: 8   LEEIRHSSSHVLATAVLRLFPDAKLDIGPPTDTGFYYDFDLEHKFTADDLEKIEAEMKKV 67

Query: 130 IARDSPFLKQYLSHEKARELFESKKE-AYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           I  +  F +  +S E+A ++     +  YK+  L  IP  E V+ YR GE+ DLC G HV
Sbjct: 68  IKENQRFERIEVSREEAVKMITDFGQTEYKLGRLADIPEGEQVSFYRNGEFLDLCAGSHV 127

Query: 189 RSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRK 248
             T ++K F KL+ +AGAY RGD N   L RIYGTA+ ++ EL  Y+  +EES KRDHR+
Sbjct: 128 NYTKKIKAF-KLLSIAGAYHRGDENNKQLQRIYGTAFPSKAELETYIEQIEESRKRDHRR 186

Query: 249 LAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQ 306
           + +EM LFHI E  G G+I W  KG  I Q L  ++  ++ K +Y ++ TP +    L++
Sbjct: 187 VGKEMGLFHIDEAVGQGLILWKPKGAVIRQELQDFISEQLLKQEYTQVFTPHIGKLGLYK 246

Query: 307 QSGHWDSYRANMFAVKCADD-------------------TIKDLRTFALKPMNCPGHVAV 347
            SGH+  Y+ + F      D                      D+  + LKPMNCP H+ +
Sbjct: 247 TSGHFPYYQESQFPPLIERDSLADLADENATCSTLTNQLETGDIEGYLLKPMNCPMHIKI 306

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
           ++    SYR+LPVRLAEFG+VYR E SG L+G+ RVRGFTQDDAH+FCT+EQ+  E    
Sbjct: 307 YDSEPHSYRDLPVRLAEFGTVYRWEQSGELNGMTRVRGFTQDDAHIFCTEEQLQGEIQGC 366

Query: 408 HNLIISIYKDFGFEKIMVKLSTRPEK---RVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            +L+  ++   G E   V++S R  +    VG  A WD AE  ++  + T+       + 
Sbjct: 367 LDLVKIVFGTLGMEDYSVRVSLRDPESDKYVGDPANWDKAEAAIREAVKTL------DVP 420

Query: 465 TGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIH 524
                GE AFYGPK ++++KD IGR+WQ GT+QVD+NLP RF+  Y  S ++   PVM+H
Sbjct: 421 YVEEEGEAAFYGPKIDFVVKDVIGREWQLGTVQVDYNLPVRFDINYTGSDNKPHRPVMVH 480

Query: 525 RAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIET 584
           RA FGS+ERF G++IE+F G+ P WL+P Q  +  I+    +YAQ + + LK++ +    
Sbjct: 481 RAPFGSMERFCGLLIEHFGGDFPTWLAPEQVRILPISDKVADYAQSLLDQLKANGVRATA 540

Query: 585 DFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
           DF ++ +  KIR   + K+P  +I G++EA E  + +R         +   + 
Sbjct: 541 DFNSDKLGAKIRNAELDKVPNTLIVGEREAEENKVSVRSRFHDGKPTMLFEEF 593


>gi|300934571|ref|ZP_07149827.1| threonyl-tRNA synthetase [Corynebacterium resistens DSM 45100]
          Length = 706

 Score =  532 bits (1369), Expect = e-149,   Method: Composition-based stats.
 Identities = 233/645 (36%), Positives = 350/645 (54%), Gaps = 42/645 (6%)

Query: 32  RSLAKKAVAVAIN--GKVCDLSD-PVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSI 88
            +   +A+    +  G + DLS  P  +  +  +  +      VIRHS AH++A+AVQ  
Sbjct: 51  PNKGPQAIVCVKDAEGNLRDLSWAPNHDTDVTAVPADTEEGRGVIRHSAAHVLAQAVQKE 110

Query: 89  WPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQ-YLSHEKAR 147
           +P  ++ IGP IE+GFYYDFD  +PF+ ++L +IEK M++II     F ++ Y S ++AR
Sbjct: 111 FPGTKLGIGPAIENGFYYDFDVAEPFTPEDLNKIEKTMKKIIKSGQKFERKAYASVDEAR 170

Query: 148 ELFESKKEAYKVEILESI----PAKENVTLYRQGE---------------WFDLCRGPHV 188
              E   E +K E+++      P  +  T    GE               W+DLCRGPHV
Sbjct: 171 A--EYTHEPFKTELIDDKGNVDPDSDEATEVGSGELTAYSNVNPRTGDVEWYDLCRGPHV 228

Query: 189 RSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRK 248
            +T  +  F        AYWRGD ++  L RIYGTAW +++ L  Y   L E+EKRDHR+
Sbjct: 229 PTTRYIPAFAITRSS-AAYWRGDQSKAGLQRIYGTAWESKEALESYQEMLAEAEKRDHRR 287

Query: 249 LAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ 306
           L  E+DLF   ++ GSG   +H  G  +   +  + RR+  +  Y  +NTP +    L+Q
Sbjct: 288 LGAELDLFSFPDEIGSGFPVFHPNGGIVRLEMEEHSRRRHIESGYSFVNTPHITKGDLFQ 347

Query: 307 QSGHWDSYRANMFAVKCADDT-------IKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           +SGH D Y   MF     D          K  + +  KPMNCP H  +F    +SYRELP
Sbjct: 348 KSGHLDFYAEGMFPPMQLDGEVDAEGNVTKQAQDYYAKPMNCPMHNLIFASRGRSYRELP 407

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +RL EFG+VYR E SG +HGL R RGFTQDDAH++CT++Q+  E   +   IIS+ +D+G
Sbjct: 408 LRLFEFGTVYRYEKSGVIHGLTRARGFTQDDAHIYCTEDQLEQELTTVLEFIISLLRDYG 467

Query: 420 FEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
            +   ++LST+     VGSD +W+ +  I++ V      ++   +         AFYGPK
Sbjct: 468 LDDFYLELSTKDPNKFVGSDEIWERSTEILQRV------ATNSGLELVPDPAGAAFYGPK 521

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
                +DAIGR WQ  T+Q+DFNLP RFN  Y      K  P+MIHRA+FGSIERF G++
Sbjct: 522 ISVQARDAIGRTWQMSTVQLDFNLPERFNLEYTAPDGSKQRPIMIHRALFGSIERFFGVL 581

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           +E++ G  P WL+P Q +   +     EY   +A+ L+   +  E D  ++ +  KIR H
Sbjct: 582 LEHYAGAFPAWLAPHQVVGIPVADEFNEYLDSVASDLRKRGIRAEVDTSDDRMQKKIRTH 641

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  K+P +++ G ++    ++  R    +    V    A+ ++ +
Sbjct: 642 TTGKVPFMLLVGGRDVEADAVSFRFLDGSQVNGVPRDRAVELIAQ 686


>gi|171910788|ref|ZP_02926258.1| threonyl-tRNA synthetase [Verrucomicrobium spinosum DSM 4136]
          Length = 652

 Score =  532 bits (1369), Expect = e-149,   Method: Composition-based stats.
 Identities = 237/637 (37%), Positives = 353/637 (55%), Gaps = 69/637 (10%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           L  +RHSCAHIMA A+  IWP+ Q A GP +E GFYYDFD +   + D+  +IE +M++I
Sbjct: 17  LERLRHSCAHIMATAILRIWPDAQFAYGPPVESGFYYDFDLKHRITPDDFEKIEAEMKKI 76

Query: 130 IARDSPFLKQYLSHEKARELFES-----------KKEAYKVEILESIPAKENVTLYRQGE 178
              +  F K+ LS E+A  L ES               +K++++  IP  E ++ Y+ GE
Sbjct: 77  AKENQKFEKRVLSREEAIALAESGRLGGLSERPGNASQFKLDLIAKIPEGEEISCYQNGE 136

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + DLC GPHV  T + K   KLM +A AY+ GD ++P L R+YGTA+ + +EL ++L  L
Sbjct: 137 FLDLCAGPHVNYTSKCKNV-KLMSIASAYYMGDESKPQLQRLYGTAFPSSEELAKHLEQL 195

Query: 239 EESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINT 296
           EE++KRDHRKL RE+ LF I E    G+I W  KG  I Q L +++  +++   Y+++ T
Sbjct: 196 EEAKKRDHRKLGRELQLFAIDEKVGQGLILWLPKGAVIRQELQNFIGEELRKQGYQQVFT 255

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT----------------------- 333
           P +    L++ SGH+  Y+ + F+    +D +                            
Sbjct: 256 PHIGKLELYKTSGHFPYYKESQFSPVVENDELAKAADCGCSCAEVMARLEGVSKKLREEI 315

Query: 334 -----------------------FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYR 370
                                  F LKPMNCP H+ ++    KSYR+LPVRLAEFG+VYR
Sbjct: 316 NSRTGQDTITADRVMPEEDLMDGFLLKPMNCPHHIRIYAQSPKSYRDLPVRLAEFGTVYR 375

Query: 371 NEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR 430
            E SG L GL RVRGFTQDDAH+FCT++Q+  E +   +L+ ++    G     V++  R
Sbjct: 376 WEQSGELGGLTRVRGFTQDDAHLFCTEDQVEQEIMGCLSLVKTVLTTLGMSDYRVRVGLR 435

Query: 431 PEK---RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAI 487
                   G+   WD AE   +    T+       +      GE AFYGPK ++++KD I
Sbjct: 436 DPDSNKYTGTAESWDKAEASCRKAASTLG------VPFTEEPGEAAFYGPKIDFVVKDVI 489

Query: 488 GRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           GR+WQ GT+QVD+N P RF+  Y+ + +    PVMIHRA FGS+ERF G++IE+F G+ P
Sbjct: 490 GREWQLGTVQVDYNNPVRFDLTYIGADNAAHRPVMIHRAPFGSMERFTGVLIEHFAGHFP 549

Query: 548 LWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIII 607
           +WL+P Q  V T++  +  +A E+ N LK+  + +  D  ++ I  KIR   I KIP ++
Sbjct: 550 VWLAPEQVRVLTVSEKSDAFANEVLNELKAKGVRVVLDQSSDKIGAKIRNAQIDKIPYML 609

Query: 608 ICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           + G+KEA+  ++ +R          +L + +  L +E
Sbjct: 610 VIGEKEANSGAVAVRHSKKGDLGVKALGEFVTGLQEE 646


>gi|253567818|ref|ZP_04845229.1| threonyl-tRNA synthetase [Bacteroides sp. 1_1_6]
 gi|251841891|gb|EES69971.1| threonyl-tRNA synthetase [Bacteroides sp. 1_1_6]
          Length = 556

 Score =  531 bits (1368), Expect = e-148,   Method: Composition-based stats.
 Identities = 230/567 (40%), Positives = 344/567 (60%), Gaps = 19/567 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+TFPDGS++ +     G  +AESIS  LA+  +A  +NG+  DL  P+  +    + 
Sbjct: 1   MIKITFPDGSVREYNEGVNGLQIAESISSRLAQDVLACGVNGETYDLGRPINEDADFVLY 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
             +D        H+ AH++AEA+Q ++P +Q  IGP IE+GFYYD D  E      +L  
Sbjct: 61  KWDDEEGKHAFWHTSAHLLAEALQELYPGIQFGIGPAIENGFYYDVDPGEAVIKESDLPA 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE KM E+ A+    +++ +S   A ++F  + E YK E++  +    ++T Y QG + D
Sbjct: 121 IEAKMLELSAKKEAVVRESISKTDALKMFGDRGETYKCELISEL-EDGHITTYTQGAFTD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ +T  +K   KL  VAGAYWRG  +R ML+RIYG  +  ++ L +YL  LEE+
Sbjct: 180 LCRGPHLMTTAPIK-AIKLTTVAGAYWRGHEDRKMLTRIYGITFPKKKMLDEYLVLLEEA 238

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           +KRDHRK+ +EM LF  +E    G+  W  KG  +   L  ++RR + + DY+E+ TP +
Sbjct: 239 KKRDHRKIGKEMQLFMFSETVGKGLPMWLPKGTALRLRLQEFLRRIQTRYDYQEVITPPI 298

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            ++ L+  SGH+  Y  + F       T ++   + LKPMNCP H  ++ +  +SY++LP
Sbjct: 299 GNKLLYVTSGHYAKYGKDAFQ---PIHTPEEGEEYFLKPMNCPHHCEIYKNFPRSYKDLP 355

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AEFG+V R E SG LHGL RVR FTQDDAH+FC  +Q+ +E L++ ++I  +++   
Sbjct: 356 LRIAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKDEFLRVMDIISIVFRSMN 415

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           F+    ++S R     EK +GSD  W+ AE  +    +      +  +   +  GE AFY
Sbjct: 416 FQNFEAQISLRDKVNREKYIGSDDNWEKAEQAIIEACE------EKGLPAKIEYGEAAFY 469

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK ++++KDAIGR WQ GTIQVD+NLP RF   Y+ S ++K  PVMIHRA FGS+ERF+
Sbjct: 470 GPKLDFMVKDAIGRRWQLGTIQVDYNLPERFELEYMGSDNQKHRPVMIHRAPFGSMERFV 529

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITS 562
            ++IE+  G  PLWL+P Q  +  I+ 
Sbjct: 530 AVLIEHTAGKFPLWLTPDQVAILPISE 556


>gi|319442178|ref|ZP_07991334.1| threonyl-tRNA synthetase [Corynebacterium variabile DSM 44702]
          Length = 697

 Score =  531 bits (1368), Expect = e-148,   Method: Composition-based stats.
 Identities = 237/646 (36%), Positives = 356/646 (55%), Gaps = 43/646 (6%)

Query: 32  RSLAKKAVAVAIN--GKVCDLS-DPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSI 88
            +   +A+    +  G + DL+  P  +  +  +         VIRHSCAH++A+AVQ  
Sbjct: 42  PNKGPEAIVCVKDAEGNLRDLAFTPDVDTEVTAVAANTDEGRGVIRHSCAHVLAQAVQKE 101

Query: 89  WPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQ-YLSHEKAR 147
           +P  ++ IGP IE+GFYYDF+  +PF+ ++L ++EK M++II     F ++ Y S E AR
Sbjct: 102 FPGTKLGIGPAIENGFYYDFEPAEPFTPEDLKKLEKSMKKIIKSGQKFERKAYDSVEDAR 161

Query: 148 ELFESKKEAYKVEILES-----IPAKENVTLYRQGE---------------WFDLCRGPH 187
              E  +E +K+E+++      IP  +      +GE               W+DLCRGPH
Sbjct: 162 --LEYLQEPFKLELVDDKSRGDIPEGDASVEVGEGELTAYSNVNPRSGEVEWYDLCRGPH 219

Query: 188 VRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHR 247
           V +T  +  F    + + AYWRGD ++  L RIYGTAW +++ L +Y   L E+EKRDHR
Sbjct: 220 VPTTRYIPAFALT-RTSAAYWRGDQSKAGLQRIYGTAWESKEALDEYQTMLAEAEKRDHR 278

Query: 248 KLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLW 305
           +L  E+DLF   ++ GSG   +H  G  +   +  + RR+     Y  +NTP +    L+
Sbjct: 279 RLGSELDLFSFPDEIGSGFPVFHPDGATVRMEMEEHSRRRHIASGYSFVNTPHITKGDLF 338

Query: 306 QQSGHWDSYRANMFAVKCADDT-------IKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++SGH D Y   MF     D+         K    +  KPMNCP H  +F    +SYREL
Sbjct: 339 KKSGHLDWYADGMFPAMKLDEERDADGNITKQAVDYYAKPMNCPMHNLIFASRGRSYREL 398

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RL EFG+VYR E SG +HGL R RGFTQDDAH++CT++Q+  E   +   IIS+ KD+
Sbjct: 399 PLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYCTEDQLEVELTTVLEFIISLLKDY 458

Query: 419 GFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           G +   ++LST+  K  VGSD +W+ A N ++ V +      +  +         AFYGP
Sbjct: 459 GLDDFYLELSTKDPKKFVGSDEVWEKATNTLRAVAE------KSGLELVPDPEGAAFYGP 512

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K     +DAIGR WQ  T+Q+DFNLP RF+  Y  S   K  PVMIHRA+FGSIERF G+
Sbjct: 513 KISVQARDAIGRTWQMSTVQLDFNLPERFDLEYTASDGTKQRPVMIHRALFGSIERFFGV 572

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           ++E++ G  P WL+P Q     +    + Y +E+   L+ H +    D  ++ +  KIR 
Sbjct: 573 LLEHYAGAFPAWLAPHQVTGIPVADEFIPYLEEVTAELRGHGIRAAVDTSDDRMQKKIRN 632

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           H+  K+P +++ G ++    ++  R    T    V   DA+ I+ +
Sbjct: 633 HTTGKVPFMLLVGGRDVEAGAVSFRFLDGTQVNGVPKEDAVRIIAE 678


>gi|17232215|ref|NP_488763.1| threonyl-tRNA synthetase [Nostoc sp. PCC 7120]
 gi|17133860|dbj|BAB76422.1| threonyl-tRNA synthetase [Nostoc sp. PCC 7120]
          Length = 612

 Score =  531 bits (1368), Expect = e-148,   Method: Composition-based stats.
 Identities = 254/606 (41%), Positives = 365/606 (60%), Gaps = 35/606 (5%)

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +   +   L  IRH+CAHIMA AVQ ++   +VA GP+ ++GFYYDFD     + D+L +
Sbjct: 12  LDQHNSEQLVRIRHTCAHIMAMAVQKLFLGTKVATGPVTDNGFYYDFDCPISITPDDLGK 71

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG---- 177
           I  +M+ II  + P +++ +  E+ R       E YK+EIL+ IP +E +T Y  G    
Sbjct: 72  IAAEMRRIIKANLPIIREEVQREEIRTEIAQLNEPYKLEILDRIPPEETITRYFIGSPDT 131

Query: 178 -----------------EWFDLCRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSR 219
                             W+DLC GPH+  TG++    F+L+ +AGAYW+GD ++P L R
Sbjct: 132 STPESSLFVADVKPASNYWWDLCAGPHINFTGEIDPNSFQLLNIAGAYWQGDESKPQLQR 191

Query: 220 IYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQT 278
           IYGTAW T+ EL  YL   EE+ +RDHRKL +E++LF I E+ G G++FWH KG  I   
Sbjct: 192 IYGTAWKTKAELEAYLKQREEALRRDHRKLGQELNLFSIQEEAGGGLVFWHPKGASIRYI 251

Query: 279 LISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALK 337
           +  Y R+  ++  Y+ + TP V +  LW+ SGH+D Y+ NMF     D    + + + +K
Sbjct: 252 IEDYWRKCHLESGYQLLYTPHVANLDLWKTSGHFDFYQENMF-----DSMEVENQAYQIK 306

Query: 338 PMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK 397
           PMNCP HV  + H L SYRELP+R AE G+VYR E SG+LHGLMRVRGFTQDDAH+FC  
Sbjct: 307 PMNCPFHVLTYKHQLHSYRELPLRWAELGTVYRYERSGALHGLMRVRGFTQDDAHIFCLP 366

Query: 398 EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKN 457
            Q+ +E L + NL   I  DFGF+   V LSTRP+K VG++ +W+ A + ++  LD    
Sbjct: 367 HQIADEILGVLNLTEHILSDFGFKNYEVNLSTRPDKSVGNNEVWELATSALRQALDA--- 423

Query: 458 SSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK 517
                 N  V  G GAFYGPK +  ++DAIGR WQC TIQVDFNLP RF+  Y+ +   +
Sbjct: 424 ---KGWNYIVDEGGGAFYGPKIDIKIQDAIGRLWQCSTIQVDFNLPERFDMEYIATDGSR 480

Query: 518 CHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKS 577
             P+MIHRA+FGS+ERF GI+IEN+ G+ PLWL+P+Q  +  ++     Y + +A  L+ 
Sbjct: 481 QRPIMIHRAIFGSLERFFGILIENYAGDFPLWLAPVQIRLLPVSDDVRGYTESVAIALQK 540

Query: 578 HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
               +E D   E +  +IR   ++KIP++ + G KE   +++ +R   +     ++L D 
Sbjct: 541 DGFRVEIDISGERLGKQIRTAELEKIPVVGVVGKKEVENQNLSVRTRANGDLGAINLNDL 600

Query: 638 IPILTK 643
              L +
Sbjct: 601 TNHLRE 606


>gi|57506155|ref|ZP_00372076.1| threonyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
 gi|57015550|gb|EAL52343.1| threonyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
          Length = 602

 Score =  531 bits (1367), Expect = e-148,   Method: Composition-based stats.
 Identities = 242/612 (39%), Positives = 372/612 (60%), Gaps = 19/612 (3%)

Query: 34  LAKKAVAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQ 93
           + K+ +A   NG + D          ++       +L V+RHSCAH+MA+A+++++PE +
Sbjct: 1   MEKEVIAYQNNGVLIDTQSATNLDFEKVYFDNSKEALEVLRHSCAHLMAQAIKTLYPEAK 60

Query: 94  VAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESK 153
             +GP+IEDGFYYDF      + ++L +IEKKM+E         K  LS ++A E  + K
Sbjct: 61  FFVGPVIEDGFYYDFRVNSKLNEEDLIKIEKKMKEFAEAKLEIQKYTLSKQEALE--KFK 118

Query: 154 KEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSN 213
            +  K E+L  IP+ E V++Y+QGE+ DLCRGPH  +T  ++ FFKL ++AGAY  GD  
Sbjct: 119 DDDLKQEVLAKIPSDE-VSIYKQGEFEDLCRGPHAPNTKFLR-FFKLTRIAGAYLGGDEK 176

Query: 214 RPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKG 272
           R ML+RIYGTA+  ++ L +YL+ +EE+ KRDHRKL  E+ LF    + G G+  W   G
Sbjct: 177 REMLTRIYGTAFADKESLKEYLHIIEEARKRDHRKLGSELKLFTFDEQIGGGLPIWLSNG 236

Query: 273 WKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
            ++   L   + +      YE +  P++L    W+ SGH+ +Y+ NM+       T  D 
Sbjct: 237 TRLRSKLEQMLYKIHRLRGYEPVRGPELLKAEAWKISGHYANYKENMYF------TNIDE 290

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
           + + +KPMNC GH+ ++ + ++SYR+LP++  E+G V+R+E SG LHGL RVR FTQDDA
Sbjct: 291 QEYGIKPMNCVGHIKIYQNDVRSYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFTQDDA 350

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
           H+FC   Q+  + L+I + + S+ K F FE  M ++STRPEK +G +A+W+ A   +K  
Sbjct: 351 HIFCMPSQIKEQVLEILDFVASLMKIFDFEYEM-EISTRPEKAIGDEAIWEVATKALKEA 409

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
           LD      +  +  G+  G GAFYGPK +  + DA+ R WQCGTIQVDFNLP RF   Y 
Sbjct: 410 LD------EQGLKYGIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDFNLPERFALEYT 463

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
            S + K  PVM+HRA+ GS ERFIGI+ E+  G  P +++PIQ  +  I+   + YA+ I
Sbjct: 464 TSENTKERPVMLHRAILGSFERFIGILTEHCAGEFPFFIAPIQVGIVPISEVHLAYAKGI 523

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
              L    +  E   +NE+++ KIR    +K+P+I++ GD+E S R++ +R   +   + 
Sbjct: 524 QRTLLEMGVDSEIYDKNESLSKKIRNAEKQKLPMILVIGDEELSNRAVALRDRRAKEQKS 583

Query: 632 VSLLDAIPILTK 643
           +SL + + ++ +
Sbjct: 584 LSLDEFMNLIKE 595


>gi|38233973|ref|NP_939740.1| threonyl-tRNA synthetase [Corynebacterium diphtheriae NCTC 13129]
 gi|73919783|sp|Q6NGW2|SYT_CORDI RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|38200235|emb|CAE49919.1| threonyl-tRNA synthetase [Corynebacterium diphtheriae]
          Length = 687

 Score =  531 bits (1367), Expect = e-148,   Method: Composition-based stats.
 Identities = 231/644 (35%), Positives = 359/644 (55%), Gaps = 40/644 (6%)

Query: 32  RSLAKKAVAVAIN--GKVCDLSD-PVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSI 88
            +   +A+    +  G + DLS  P ++     +         VIRHSC H++A+AVQ+ 
Sbjct: 33  PNKGPEAIVCVKDSEGTLRDLSFVPEQDSKFTPVPANTEDGRTVIRHSCTHVLAQAVQAE 92

Query: 89  WPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE 148
           +P  ++ IGP IE+GFYYDFD  +PF+ ++L ++EK+M++I+ +   F ++  +   A  
Sbjct: 93  FPGTKLGIGPAIENGFYYDFDVAEPFTPEDLQKLEKRMKKIVKQGQKFERRIFA-SVAEA 151

Query: 149 LFESKKEAYKVEILES-------------IPAKENVTLY----RQG--EWFDLCRGPHVR 189
               K E YK+E++               I A +    Y    R G  +W+DLCRGPHV 
Sbjct: 152 EEALKNEPYKLELIRDKGNVDPGSDEATEIGAGDLTGYYNVNPRTGEVDWYDLCRGPHVP 211

Query: 190 STGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKL 249
           +T  +  F        AYWRGD +   L RIYGTAW +++ L +Y   + E+EKRDHR+L
Sbjct: 212 TTKYIPAFALTRSS-AAYWRGDQSLAGLQRIYGTAWESKEALEEYQLMMAEAEKRDHRRL 270

Query: 250 AREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQ 307
             E+DLF   ++ GSG   +H  G  +   +  + RR  I   Y  +NTP +    L+++
Sbjct: 271 GAELDLFSFPDEIGSGFPVFHPNGGIVRLEMEEHSRRRHINAGYSFVNTPHITKGDLFKK 330

Query: 308 SGHWDSYRANMFAVKCADDTIKDL-------RTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           SGH D Y   MF     D  + +        + +  KPMNCP H  +F    +SYRELP+
Sbjct: 331 SGHLDFYADGMFPPMQLDGEVDEEGNVVKQAQDYYAKPMNCPMHNLIFASRGRSYRELPL 390

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RL EFG+VYR E SG +HGL R RGFTQDDAH++CT++Q+  E   + + IIS+ +D+G 
Sbjct: 391 RLFEFGTVYRYEKSGVIHGLTRARGFTQDDAHIYCTEDQLEQELTSVLDFIISLLRDYGL 450

Query: 421 EKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           +   ++LST+     VGSD +W+ + +I++ V      +++  +         AFYGPK 
Sbjct: 451 DDFYLELSTKDPNKFVGSDEIWEKSTSILQRV------ATKSGLELVPDPAGAAFYGPKI 504

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
               +DAIGR WQ  T+Q+DFNLP RFN  Y +S   K  P+MIHRA+FGSIERF G+++
Sbjct: 505 SVQARDAIGRTWQMSTVQLDFNLPERFNLEYTSSDGSKKRPIMIHRALFGSIERFFGVLL 564

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E++ G  P WL+P Q I   +  S  E+ +++  +L+ + +    D  ++ +  KIR H+
Sbjct: 565 EHYAGAFPAWLAPHQVIGIPVADSFSEHLEKVTGMLRDNGVRASVDTSDDRMQKKIRNHT 624

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             K+P +++ G ++    ++  R    T    V +  AI ++T+
Sbjct: 625 TGKVPFMLLAGARDVEANAVSFRFLDGTQINGVPVDKAIGVITQ 668


>gi|296394216|ref|YP_003659100.1| threonyl-tRNA synthetase [Segniliparus rotundus DSM 44985]
 gi|296181363|gb|ADG98269.1| threonyl-tRNA synthetase [Segniliparus rotundus DSM 44985]
          Length = 683

 Score =  531 bits (1367), Expect = e-148,   Method: Composition-based stats.
 Identities = 235/639 (36%), Positives = 364/639 (56%), Gaps = 38/639 (5%)

Query: 28  ESISRSLAKKAVAVA-INGKVCDLSD-PVREGSIEIITPEDPRSLAVIRHSCAHIMAEAV 85
             +  S  +  V V   +G + DLS  P  +  +E +        +VIRHS AH++A+AV
Sbjct: 29  AGLPTSGPEAVVVVRDADGALRDLSWAPEADAEVEPVLANTEDGRSVIRHSAAHVLAQAV 88

Query: 86  QSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEK 145
           Q  +PE ++ IGP I+DGFYYDF  ++ F+ ++LA++E +M++II     F ++ +  E+
Sbjct: 89  QQEFPEAKLGIGPPIKDGFYYDFRVDRAFTPEDLARLETRMRKIIKASQRFSRRVVEVEE 148

Query: 146 ARELFESKKEAYKVEILESIPAKENVTLYRQG-----------------EWFDLCRGPHV 188
           A+   E   E +K+E++      ++  +   G                 EW DLCRGPH+
Sbjct: 149 AKA--ELANEPFKLELIGDKSGVDDPEVMEVGGTELTVYDNLNPRTGEREWGDLCRGPHI 206

Query: 189 RSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRK 248
            +T  +  F KL + + AYWRGD +R  L RIYGTAW + + L ++L  + E+E+RDHRK
Sbjct: 207 PTTKHIPAF-KLTRSSAAYWRGDQSRDSLQRIYGTAWESAEALERHLALIAEAERRDHRK 265

Query: 249 LAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQ 306
           L  E+DLF   ++ GSG+  +H KG  + + L  Y R + I+  YE +NTP +   HL++
Sbjct: 266 LGAELDLFSFPDELGSGLPVFHPKGGVLRKELEDYSRAKHIEAGYEFVNTPHITKSHLYE 325

Query: 307 QSGHWDSYRANMFAVKCADDTIKD-------LRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            SGH D Y   MF     D+ + +        + + LKPMNCP H  +F    +SYRELP
Sbjct: 326 VSGHLDWYADGMFPPMHVDEELHEDGSVRKPGQDYYLKPMNCPMHNLIFRSRGRSYRELP 385

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +RL EFGSVYR E SG +HGL RVRG TQDDAH++CT+ QM +E       ++ + +D+G
Sbjct: 386 LRLFEFGSVYRYEKSGVVHGLTRVRGMTQDDAHIYCTRAQMKDELSTTLQFVLDLLRDYG 445

Query: 420 FEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
            +   ++LST+ E+  VG+D +W +A   +  V +         +      G  AFYGPK
Sbjct: 446 LDDFYLELSTKDEQKFVGADEIWAEATRTLSEVAEASG------LTLVPDPGGAAFYGPK 499

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
                KDA+GR WQ  TIQ+DFNLP RF+  Y      K  PVMIHRA+FGSIERFIG++
Sbjct: 500 ISVQAKDALGRTWQMSTIQLDFNLPERFDLEYTGPSGHKERPVMIHRALFGSIERFIGVL 559

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           +E++ G  P+WL+P+Q +   ++   V + +E  + L++  +    D  ++ +  KI  H
Sbjct: 560 VEHYAGAFPMWLAPVQVMGIPVSEDHVPHLREFVDSLRAGGVRAHIDSSDDRMQKKIFTH 619

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
           + +KIP +++ G ++   +++  R    +    V + +A
Sbjct: 620 TAQKIPFLVLAGGRDVEAQTVSFRFRDGSQRNAVPVAEA 658


>gi|237785631|ref|YP_002906336.1| threonyl-tRNA synthetase [Corynebacterium kroppenstedtii DSM 44385]
 gi|237758543|gb|ACR17793.1| Threonyl-tRNA synthetase [Corynebacterium kroppenstedtii DSM 44385]
          Length = 663

 Score =  530 bits (1366), Expect = e-148,   Method: Composition-based stats.
 Identities = 238/640 (37%), Positives = 354/640 (55%), Gaps = 41/640 (6%)

Query: 35  AKKAVAVAIN-GKVCDLSD-PVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEV 92
            +  V V  N G + DLS  P  +  +  +        AVIRHSC H+MA+AVQ+ +P  
Sbjct: 11  PEAVVCVKTNDGTIRDLSFAPTEDTEVTTVIAASDEGRAVIRHSCTHVMAQAVQAEFPGT 70

Query: 93  QVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYL-SHEKARELFE 151
           ++ IGP I DGFYYDF  +  F+ D+L +IEK+M++II     F +    S + ARE  +
Sbjct: 71  KLGIGPAIADGFYYDFGTDHAFTPDDLKRIEKRMKKIIKSGQRFERVVWKSLDDAREALK 130

Query: 152 SKKEAYKVEILESIPAKE------------NVTLY-----RQGE--WFDLCRGPHVRSTG 192
              E YK+E+++                   +T Y     R GE  WFDLCRGPHV +T 
Sbjct: 131 --DEPYKLELIDDKSKGTVLDEDADLDTAGELTAYNNVNPRTGEVEWFDLCRGPHVPTTK 188

Query: 193 QVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLARE 252
            +  F        AYWRGD N   + RIYGTA+ +++ L +Y   +EE+E+RDHR+L  E
Sbjct: 189 YIAAFALQRSS-AAYWRGDQNNDGMQRIYGTAFESKEALQEYQQRMEEAERRDHRRLGAE 247

Query: 253 MDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGH 310
           ++LF   ++ GSG   +H  G  +   +  + RR  I+  Y  + TP +    L+Q+SGH
Sbjct: 248 LNLFSFPDEIGSGFPVFHPDGGIVRNEMEQHSRRRHIEAGYSFVYTPHLTKGDLFQKSGH 307

Query: 311 WDSYRANMFAVKCADDT-------IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
            D Y+  MF     D+         K  + +  KPMNCP H  +F    +SYRELP+RL 
Sbjct: 308 LDFYKDGMFPPMKLDEERDAEGNITKPAQDYYAKPMNCPMHNLIFASKGRSYRELPLRLF 367

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFG+VYR E SG +HGL R RGFTQDDAH++CT++Q+ NE   + + IIS+ KD+G +  
Sbjct: 368 EFGTVYRYEKSGVIHGLTRARGFTQDDAHIYCTEDQLENELSTVLDFIISLLKDYGLDDF 427

Query: 424 MVKLSTRPEK-RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
            ++LST+     VGSD +W+ +  I++ V D      +  ++     G  AFYGPK    
Sbjct: 428 YLELSTKDPNKFVGSDEIWERSTEILRRVAD------KSGLDLVPDPGGAAFYGPKISVQ 481

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
            +DAIGR WQ  T+Q+DFNLP RF   Y      K  P+MIHRA+FGSIERF G+++E++
Sbjct: 482 ARDAIGRTWQMSTVQLDFNLPERFELEYTAPDGSKQRPIMIHRALFGSIERFFGVLLEHY 541

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P Q +   +      Y  E+ + L++  +  E D  ++ +  KIR H+  K
Sbjct: 542 AGAFPAWLAPHQVVGIPVADEFSPYLGEVVDKLRARGVRAEVDISDDRMQKKIRNHTTHK 601

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            P +++ G ++A   ++  R    +    V +  A+ +++
Sbjct: 602 APFMLLAGGRDAEAGAVSFRFLDGSQVNGVPVEKAVDVIS 641


>gi|302527884|ref|ZP_07280226.1| threonyl-tRNA synthetase [Streptomyces sp. AA4]
 gi|302436779|gb|EFL08595.1| threonyl-tRNA synthetase [Streptomyces sp. AA4]
          Length = 678

 Score =  530 bits (1366), Expect = e-148,   Method: Composition-based stats.
 Identities = 245/669 (36%), Positives = 368/669 (55%), Gaps = 48/669 (7%)

Query: 17  FPVHAT-GSDVAESISRSLAKKAVAVA--INGKVCDLSD-PVREGSIEIITPEDPRSLAV 72
            P   T G+ V E+   +     + V    +GK+ DL+  P  E  +E +        +V
Sbjct: 17  VPAGTTAGAAVREAGLPTKGPDTIVVVRDADGKLRDLAWAPEAEAQVEAVAANTEDGRSV 76

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIAR 132
           IRHS AH++A+AVQ  +P+ ++ IGP + DGFYYDF  E+PF+ ++L ++EK+M++I+  
Sbjct: 77  IRHSAAHVLAQAVQQEFPDAKLGIGPPVRDGFYYDFAVEKPFTPEDLQKLEKRMKQIVKG 136

Query: 133 DSPFLKQYL-SHEKARELFESKKEAYKVEILESIPAKENV-------------TLY---- 174
              F ++   S ++A+E  E K E +K+E+++    K+ V             T+Y    
Sbjct: 137 AQQFSRRVFASTDEAKE--ELKDEPFKLELVDLKSEKDTVDTSEIMEVGGGELTIYDNLD 194

Query: 175 ---RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQEL 231
              ++  W DLCRGPHV +T  +  F KL +VA AYWRG+   P L RIYGTAW + +  
Sbjct: 195 PRTKERVWSDLCRGPHVPTTKFIPAF-KLTRVAAAYWRGNEKNPQLQRIYGTAWESAEAQ 253

Query: 232 TQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
             +L  L E+E+RDHRKL  E+DLF   E+ GSG+  +H KG  I + L +Y RR+ ++ 
Sbjct: 254 DAHLERLAEAERRDHRKLGAELDLFSFPEEIGSGLPVFHPKGGIIRRELENYSRRRHEEA 313

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
            YE +NTP +    L+  SGH   Y   MF          +   + LK MNCP H  +F 
Sbjct: 314 GYEFVNTPHISKGDLFHTSGHLPYYADTMFPPVQF-----EEEDYYLKAMNCPMHNLIFR 368

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
              +SYRELP+RL EFG+VYR E SG +HGL RVRG T DD+H++CTKEQM +E   +  
Sbjct: 369 SRGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRVRGLTMDDSHIYCTKEQMPSELRSLLK 428

Query: 410 LIISIYKDFGFEKIMVKLSTR--PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGV 467
            ++ +  D+G     ++LSTR   +K +G D  W++A   ++             +    
Sbjct: 429 FVLDLLADYGLSDFYLELSTRGDSDKFIGEDWEWEEATETLRQAAVDSG------LELVP 482

Query: 468 LLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAV 527
             G  AFYGPK     KDAIGR WQ  TIQ+DFN   RF   Y      +  P+MIHRA+
Sbjct: 483 DPGGAAFYGPKISVQAKDAIGRTWQMSTIQLDFNQNKRFGLEYTAPDGSRQRPIMIHRAL 542

Query: 528 FGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR 587
           FGSIERF G++ E++ G  P WLSP+Q +   IT+  VEY + +   L++  + +E D  
Sbjct: 543 FGSIERFFGVLTEHYAGAFPAWLSPVQTVAIPITADQVEYLRGVEKALRAKGIRVEVDAS 602

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK---- 643
           ++ +  KIR H+ +K+P +++ G K+A   ++  R         V +  A+  + +    
Sbjct: 603 DDRMQKKIRTHTTQKVPFLLLAGAKDAEAGAVSFRFRDGGQINGVPVDQAVEAIAEWVAR 662

Query: 644 -ESLPPDCQ 651
            E+  P  +
Sbjct: 663 RENASPSAE 671


>gi|282898730|ref|ZP_06306717.1| Threonyl-tRNA synthetase, class IIa [Cylindrospermopsis raciborskii
           CS-505]
 gi|281196257|gb|EFA71167.1| Threonyl-tRNA synthetase, class IIa [Cylindrospermopsis raciborskii
           CS-505]
          Length = 610

 Score =  530 bits (1366), Expect = e-148,   Method: Composition-based stats.
 Identities = 238/608 (39%), Positives = 355/608 (58%), Gaps = 17/608 (2%)

Query: 44  NGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG 103
           N +  +L  P     I +    +   L  IRH+ +HIMA AVQ ++P+ QV IGP IE+G
Sbjct: 4   NQEAQNLEKPAE--KIYLPKTSESEILKKIRHTASHIMAMAVQKLFPKAQVTIGPWIENG 61

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE 163
           FYYDFD  +PFS  +L  I+K+M +II R  P +++ +S E+A++  E  +E YK+EIL 
Sbjct: 62  FYYDFDNPEPFSDKDLKAIQKEMVKIINRKLPVIREEVSREEAKKRIEKIQEPYKLEILA 121

Query: 164 SIPAKENVTLYRQGE-WFDLCRGPHVRSTGQVKK-FFKLMKVAGAYWRGDSNRPMLSRIY 221
            I  +E +T+Y  G+ W+DLC GPH+ +T  +     +L  VAGAYWRGD  +  L RIY
Sbjct: 122 DIK-QEPITIYHLGDEWWDLCAGPHLENTKDINPKAIELESVAGAYWRGDETKAQLQRIY 180

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLI 280
            TAW T ++L +Y    EE+ +RDHRK+ +E+ LF  +   G G+  W  KG  +   L 
Sbjct: 181 ATAWQTPEQLGEYKRRKEEALRRDHRKIGKELGLFIFSDPVGPGLPLWTPKGTLLRSILE 240

Query: 281 SYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD-LRTFALKP 338
            +++  ++K  Y  + TP +    L++ SGHW  Y+ +MF +   ++  K   + F LKP
Sbjct: 241 DFLKKEQLKRGYLPVVTPHIARVDLFKTSGHWQKYKEDMFPMMAENEESKALDQGFVLKP 300

Query: 339 MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE 398
           MNCP H+ ++   L+SYRELP+RLAEFG+VYR E SG L GL RVRGFT DD+H+F T E
Sbjct: 301 MNCPFHIQIYKSELRSYRELPMRLAEFGTVYRYEQSGELGGLTRVRGFTVDDSHLFVTPE 360

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE---KRVGSDALWDDAENIMKGVLDTI 455
           Q+  E L + +LI+++++    +    +LS R     K +G D +WD AE  ++  +  +
Sbjct: 361 QLDEEFLNVVDLILTVFRRLQLKNFKARLSFRDPTSDKYIGGDEVWDKAEGAIRRAVQQL 420

Query: 456 KNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS 515
                + I      GE AFYGPK ++I  D + R+WQ GT+QVD+NLP RF+  YV    
Sbjct: 421 GMDHFEGI------GEAAFYGPKLDFIFSDVLEREWQLGTVQVDYNLPERFDLEYVAEDG 474

Query: 516 EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLL 575
            +  PVMIHRA FGS+ER IGI+IE + G+ PLWL+PIQ  +  +    +E+ +E+A  +
Sbjct: 475 SRKRPVMIHRAPFGSLERLIGILIEEYAGDFPLWLAPIQIRLLPVGEQQIEFTKEVAGKM 534

Query: 576 KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
               +  + D   + +   IR     KIP++ + G KE    S+ IR   S     + + 
Sbjct: 535 TELGIRAQADLSGDRLAKLIRNGEKDKIPVMAVVGAKEVESNSLSIRTRASGELGVIPVE 594

Query: 636 DAIPILTK 643
             +  +  
Sbjct: 595 KVVEKMQD 602


>gi|118475741|ref|YP_892822.1| threonyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40]
 gi|118414967|gb|ABK83387.1| threonyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40]
          Length = 617

 Score =  530 bits (1365), Expect = e-148,   Method: Composition-based stats.
 Identities = 236/612 (38%), Positives = 362/612 (59%), Gaps = 23/612 (3%)

Query: 37  KAVAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAI 96
             +A  +N ++ D       G  EI       +L VIRHSCAH+MA A++ ++P  +  +
Sbjct: 15  DIIAYKVNEQIVDTQSYCGNGGEEIFFDNSKEALDVIRHSCAHLMAAAIKELYPNAKFFV 74

Query: 97  GPIIEDGFYYDF----DKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFES 152
           GP IEDGFYYD        +     +L +IEKKM+E+       +K   +  +     + 
Sbjct: 75  GPCIEDGFYYDMRVSKSDGEKLGESDLEEIEKKMKELALAKIDIVKFNSTKSEVAA--KY 132

Query: 153 KKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDS 212
             +  K E+L+ IP    V+LY QG + D+CRGPHV +T   + FFKL ++AGAY  GD 
Sbjct: 133 ASDDLKQEVLKRIP-DGVVSLYSQGNFEDICRGPHVPNTIFTR-FFKLTRIAGAYLGGDE 190

Query: 213 NRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRK 271
           NR ML+RIYGTA+  ++ L ++++ +EE++KRDHRKL  EM  F   +  G G+  W   
Sbjct: 191 NREMLTRIYGTAYADKESLKEHIHIIEEAKKRDHRKLGAEMKFFTFDDTIGVGLPIWLPN 250

Query: 272 GWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G ++   L   + R      YE +  P++L    W+ SGH+ +Y+ NM+       T+ D
Sbjct: 251 GARLRSRLEHKLYRTHRLRGYEPVRGPEILKSDAWKISGHYANYKENMYF------TVID 304

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
            + + +KPMNC GH+ V+   ++SYR+LP++  E+G V+R+E SG LHGL RVR FTQDD
Sbjct: 305 EQEYGIKPMNCVGHIKVYQSEIRSYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFTQDD 364

Query: 391 AHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKG 450
           AH+FC   Q+     +I + + ++   FGF   M ++ST+P K VG DA+W+ A   +K 
Sbjct: 365 AHLFCMPSQIKENVYEILSFVDTLMSAFGFTYEM-EISTKPAKAVGDDAVWEIATKALKD 423

Query: 451 VLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFY 510
            LD      +  +  G+  G GAFYGPK +  + DA+ R WQCGTIQVDFNLP+RF+  Y
Sbjct: 424 ALD------EKGLKYGIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDFNLPARFDLGY 477

Query: 511 VNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQE 570
           ++ ++E+  PVM+HRA+ GS ERFIGI++E+  G LP W++P Q ++  I++   +YA E
Sbjct: 478 IDENNERKQPVMLHRAIMGSFERFIGILLEHTAGELPFWIAPTQVVIIPISNEHHKYANE 537

Query: 571 IANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
           + +LL    +  E   +NET+N KIR    +++P+II+ GD E + R + +R   +   +
Sbjct: 538 VHSLLLDMDVDSEIFNKNETLNKKIRTAEKQRVPMIIVLGDNEVTNRGVALRDRRAREQK 597

Query: 631 KVSLLDAIPILT 642
            +SL + +  + 
Sbjct: 598 DMSLDEFLGFIQ 609


>gi|73919785|sp|Q8NPZ0|SYT_CORGL RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
          Length = 695

 Score =  530 bits (1365), Expect = e-148,   Method: Composition-based stats.
 Identities = 235/662 (35%), Positives = 355/662 (53%), Gaps = 41/662 (6%)

Query: 14  IKNFPVHATGSDVAE--SISRSLAKKAVAVA-INGKVCDLSD-PVREGSIEIITPEDPRS 69
           +   P             +     +  V      G++ DLS  P    +   +       
Sbjct: 22  VFEVPAGTAIGAAMRELDLPNKGPEAIVCAKDAEGQLKDLSHVPETTATFTAVPANTDDG 81

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
            AVIRHSCAH++A+AVQ+ +P  ++ IGP IE+GFYYDFD  +PF+ ++L  IEK+M++I
Sbjct: 82  RAVIRHSCAHVLAQAVQAEFPGTKLGIGPAIENGFYYDFDAAEPFTPEDLKTIEKRMKKI 141

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESI----PAKENVTLYRQGE------- 178
           I     F ++     +     E K E YK+E+++      P  +  T    GE       
Sbjct: 142 IKTGQKFERRVYESAE-AAAEELKNEPYKLELIQDKGNVDPNSDEATEVGAGELTAYDNV 200

Query: 179 --------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQE 230
                   W DLCRGPH+ +T  +  F        AYWRGD +   L RIYGTAW  ++ 
Sbjct: 201 NPRTSEVEWSDLCRGPHIPTTRYIPAFALTRSS-AAYWRGDQDNAGLQRIYGTAWEDKES 259

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIK 288
           L  Y   L E+EKRDHR+L  E+DLF   +D GSG+  +H  G  +   +  + RR  I 
Sbjct: 260 LDAYQTMLAEAEKRDHRRLGTELDLFSFPDDLGSGLPVFHPNGGIVRNEMEDHSRRRHIA 319

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD-------DTIKDLRTFALKPMNC 341
             Y  +NTP +  Q L+++SGH   Y+  MF     D       +  K  + + LKPMNC
Sbjct: 320 AGYSFVNTPHITKQDLFERSGHLGFYKDGMFPPMQVDAEFDEDGNVTKPGQEYYLKPMNC 379

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
           P H  +F+   +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDDAH++CT++Q+ 
Sbjct: 380 PMHNLIFDSRGRSYRELPLRLFEFGNVYRYEKSGVIHGLTRARGFTQDDAHIYCTEDQLE 439

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR-VGSDALWDDAENIMKGVLDTIKNSSQ 460
            E   + + I+S+ +D+G +   ++LSTR  K+ VGSD +W+ +  I+  V      ++ 
Sbjct: 440 AELTSVLDFILSLLRDYGLDDFYLELSTRDPKKSVGSDEIWERSTEILNRV------ATN 493

Query: 461 DRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHP 520
             +         AFYGPK     +DAIGR WQ  T+Q+DFN+P RFN  Y +S   K  P
Sbjct: 494 SGLELVPDPEGAAFYGPKISVQARDAIGRTWQMSTVQLDFNMPERFNLEYTSSDGSKQQP 553

Query: 521 VMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHL 580
           +MIHRA+FGSIERF G+++E++ G  P WL+P Q +   +    + + + I   L+   +
Sbjct: 554 IMIHRALFGSIERFFGVLLEHYAGAFPAWLAPHQVMGIPVADDCIPHLETITAQLREKGI 613

Query: 581 SIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
             + D  ++ +  KIR H+  K+P +++ G ++    ++  R    T    V + +AI +
Sbjct: 614 RADVDTSDDRMQKKIRNHTTGKVPFMLLAGARDVEANAVSFRFLDGTQVNGVPVDEAIAV 673

Query: 641 LT 642
           ++
Sbjct: 674 IS 675


>gi|62390552|ref|YP_225954.1| threonyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|41325890|emb|CAF20053.1| THREONYL-TRNA SYNTHETASE [Corynebacterium glutamicum ATCC 13032]
          Length = 700

 Score =  530 bits (1365), Expect = e-148,   Method: Composition-based stats.
 Identities = 235/662 (35%), Positives = 355/662 (53%), Gaps = 41/662 (6%)

Query: 14  IKNFPVHATGSDVAE--SISRSLAKKAVAVA-INGKVCDLSD-PVREGSIEIITPEDPRS 69
           +   P             +     +  V      G++ DLS  P    +   +       
Sbjct: 27  VFEVPAGTAIGAAMRELDLPNKGPEAIVCAKDAEGQLKDLSHVPETTATFTAVPANTDDG 86

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
            AVIRHSCAH++A+AVQ+ +P  ++ IGP IE+GFYYDFD  +PF+ ++L  IEK+M++I
Sbjct: 87  RAVIRHSCAHVLAQAVQAEFPGTKLGIGPAIENGFYYDFDAAEPFTPEDLKTIEKRMKKI 146

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESI----PAKENVTLYRQGE------- 178
           I     F ++     +     E K E YK+E+++      P  +  T    GE       
Sbjct: 147 IKTGQKFERRVYESAE-AAAEELKNEPYKLELIQDKGNVDPNSDEATEVGAGELTAYDNV 205

Query: 179 --------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQE 230
                   W DLCRGPH+ +T  +  F        AYWRGD +   L RIYGTAW  ++ 
Sbjct: 206 NPRTSEVEWSDLCRGPHIPTTRYIPAFALTRSS-AAYWRGDQDNAGLQRIYGTAWEDKES 264

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIK 288
           L  Y   L E+EKRDHR+L  E+DLF   +D GSG+  +H  G  +   +  + RR  I 
Sbjct: 265 LDAYQTMLAEAEKRDHRRLGTELDLFSFPDDLGSGLPVFHPNGGIVRNEMEDHSRRRHIA 324

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD-------DTIKDLRTFALKPMNC 341
             Y  +NTP +  Q L+++SGH   Y+  MF     D       +  K  + + LKPMNC
Sbjct: 325 AGYSFVNTPHITKQDLFERSGHLGFYKDGMFPPMQVDAEFDEDGNVTKPGQEYYLKPMNC 384

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
           P H  +F+   +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDDAH++CT++Q+ 
Sbjct: 385 PMHNLIFDSRGRSYRELPLRLFEFGNVYRYEKSGVIHGLTRARGFTQDDAHIYCTEDQLE 444

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR-VGSDALWDDAENIMKGVLDTIKNSSQ 460
            E   + + I+S+ +D+G +   ++LSTR  K+ VGSD +W+ +  I+  V      ++ 
Sbjct: 445 AELTSVLDFILSLLRDYGLDDFYLELSTRDPKKSVGSDEIWERSTEILNRV------ATN 498

Query: 461 DRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHP 520
             +         AFYGPK     +DAIGR WQ  T+Q+DFN+P RFN  Y +S   K  P
Sbjct: 499 SGLELVPDPEGAAFYGPKISVQARDAIGRTWQMSTVQLDFNMPERFNLEYTSSDGSKQQP 558

Query: 521 VMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHL 580
           +MIHRA+FGSIERF G+++E++ G  P WL+P Q +   +    + + + I   L+   +
Sbjct: 559 IMIHRALFGSIERFFGVLLEHYAGAFPAWLAPHQVMGIPVADDCIPHLETITAQLREKGI 618

Query: 581 SIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
             + D  ++ +  KIR H+  K+P +++ G ++    ++  R    T    V + +AI +
Sbjct: 619 RADVDTSDDRMQKKIRNHTTGKVPFMLLAGARDVEANAVSFRFLDGTQVNGVPVDEAIAV 678

Query: 641 LT 642
           ++
Sbjct: 679 IS 680


>gi|305432763|ref|ZP_07401922.1| threonine--tRNA ligase [Campylobacter coli JV20]
 gi|304444160|gb|EFM36814.1| threonine--tRNA ligase [Campylobacter coli JV20]
          Length = 610

 Score =  530 bits (1365), Expect = e-148,   Method: Composition-based stats.
 Identities = 242/615 (39%), Positives = 370/615 (60%), Gaps = 20/615 (3%)

Query: 34  LAKKAVAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQ 93
           + K+ +A   + K+ D          EI       SL VIRHSCAH+MA+A++S++PE +
Sbjct: 9   MEKEVIAYLDDEKIVDSQSKNSIDLKEIYFDNSKESLEVIRHSCAHLMAQAIKSLYPEAK 68

Query: 94  VAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESK 153
             +GP+IEDGFYYDF        ++LA+IEKKM+E++       K  ++  +A    + K
Sbjct: 69  FFVGPVIEDGFYYDFRVNSKIGEEDLAKIEKKMKELVEAKQEIEKYEITKNEAIA--KFK 126

Query: 154 KEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSN 213
            +  K E+L  IP    V++Y+QGE+ DLCRGPHV +T  ++ F    +VAGAY  GD  
Sbjct: 127 DDDLKQEVLLRIP-DGKVSIYKQGEFEDLCRGPHVPNTKFLRNFSLT-RVAGAYLGGDEK 184

Query: 214 RPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKG 272
           R ML+RIYGTA+  ++ L ++L  +EE++KRDHRKL  E+ LF   ++ G G+  W   G
Sbjct: 185 REMLTRIYGTAFADKESLKEHLRIIEEAKKRDHRKLGTELKLFTFDDEIGGGLPIWLSNG 244

Query: 273 WKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
            ++   L   + +      YE +  P++L    W+ SGH+ +Y+ NM+  +       D 
Sbjct: 245 ARLRSKLEHMLYKIHRLRGYEPVRGPELLKADAWKISGHYANYKENMYFTQI------DE 298

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
           + + +KPMNC GH+ ++   ++SYR+LP++  E+G V+R+E SG LHGL RVR FTQDDA
Sbjct: 299 QEYGIKPMNCVGHIKIYQSDVRSYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFTQDDA 358

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
           H+FC   Q+  + L+I   + ++ K F F   M ++ST+P K +G D +WD A   +K  
Sbjct: 359 HIFCMPSQIKEQVLEILAFVDNLMKLFDFSYEM-EISTKPAKAIGDDEIWDTATKALKEA 417

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
           LD      +  +  G+  G GAFYGPK +  + DA+ R WQCGTIQVDFNLP RF   Y 
Sbjct: 418 LD------EQGLKYGIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDFNLPERFKLEYT 471

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
           +S++EK  PVM+HRA+ GS ERFIGI+ E+  G  P +++P    +  I+ S + YA+EI
Sbjct: 472 DSNNEKKQPVMLHRAILGSFERFIGILTEHCAGEFPFFIAPTAVGIVPISDSHIAYAKEI 531

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
              L   ++  E   +NE+++ KIR    +K+P+I++ GD+E ++RS+ +R   +   + 
Sbjct: 532 QRALLELNIDSEVYEKNESLSKKIRTAEKQKLPMILVLGDEEVAKRSVALRDRRAKEQKN 591

Query: 632 VSLLDAIPILTKESL 646
           +SL + I  L KE +
Sbjct: 592 LSLDEFI-KLVKEKM 605


>gi|57168347|ref|ZP_00367481.1| threonyl-tRNA synthetase [Campylobacter coli RM2228]
 gi|57020155|gb|EAL56829.1| threonyl-tRNA synthetase [Campylobacter coli RM2228]
          Length = 602

 Score =  530 bits (1365), Expect = e-148,   Method: Composition-based stats.
 Identities = 242/615 (39%), Positives = 370/615 (60%), Gaps = 20/615 (3%)

Query: 34  LAKKAVAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQ 93
           + K+ +A   + K+ D          EI       SL VIRHSCAH+MA+A++S++PE +
Sbjct: 1   MEKEVIAYLDDEKIVDSQSKNSIDLKEIYFDNSKESLEVIRHSCAHLMAQAIKSLYPEAK 60

Query: 94  VAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESK 153
             +GP+IEDGFYYDF        ++LA+IEKKM+E++       K  ++  +A    + K
Sbjct: 61  FFVGPVIEDGFYYDFRVNSKIGEEDLAKIEKKMKELVEAKQEIEKYEITKNEAIA--KFK 118

Query: 154 KEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSN 213
            +  K E+L  IP    V++Y+QGE+ DLCRGPHV +T  ++ F    +VAGAY  GD  
Sbjct: 119 DDDLKQEVLLRIP-DGKVSIYKQGEFEDLCRGPHVPNTKFLRNFSLT-RVAGAYLGGDEK 176

Query: 214 RPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKG 272
           R ML+RIYGTA+  ++ L ++L  +EE++KRDHRKL  E+ LF   ++ G G+  W   G
Sbjct: 177 REMLTRIYGTAFADKESLKEHLRIIEEAKKRDHRKLGTELKLFTFDDEIGGGLPIWLSNG 236

Query: 273 WKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
            ++   L   + +      YE +  P++L    W+ SGH+ +Y+ NM+  +       D 
Sbjct: 237 ARLRSKLEHMLYKIHRLRGYEPVRGPELLKADAWKISGHYANYKENMYFTQI------DE 290

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
           + + +KPMNC GH+ ++   ++SYR+LP++  E+G V+R+E SG LHGL RVR FTQDDA
Sbjct: 291 QEYGIKPMNCVGHIKIYQSDVRSYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFTQDDA 350

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
           H+FC   Q+  + L+I   + ++ K F F   M ++ST+P K +G D +WD A   +K  
Sbjct: 351 HIFCMPSQIKEQVLEILAFVDNLMKLFDFSYEM-EISTKPAKAIGDDEIWDTATKALKEA 409

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
           LD      +  +  G+  G GAFYGPK +  + DA+ R WQCGTIQVDFNLP RF   Y 
Sbjct: 410 LD------EQGLKYGIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDFNLPERFKLEYT 463

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
           +S++EK  PVM+HRA+ GS ERFIGI+ E+  G  P +++P    +  I+ S + YA+EI
Sbjct: 464 DSNNEKKQPVMLHRAILGSFERFIGILTEHCAGEFPFFIAPTAVGIVPISDSHIAYAKEI 523

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
              L   ++  E   +NE+++ KIR    +K+P+I++ GD+E ++RS+ +R   +   + 
Sbjct: 524 QRALLELNIDSEVYEKNESLSKKIRTAEKQKLPMILVLGDEEVAKRSVALRDRRAKEQKN 583

Query: 632 VSLLDAIPILTKESL 646
           +SL + I  L KE +
Sbjct: 584 LSLDEFI-KLVKEKM 597


>gi|73981321|ref|XP_860741.1| PREDICTED: similar to threonyl-tRNA synthetase-like 1 isoform 4
           [Canis familiaris]
          Length = 695

 Score =  530 bits (1365), Expect = e-148,   Method: Composition-based stats.
 Identities = 213/656 (32%), Positives = 336/656 (51%), Gaps = 54/656 (8%)

Query: 5   IKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           IK+T P G  +     + T   +A+ +S ++A   VA  +NG++ DL  P+  +  ++ +
Sbjct: 64  IKITLPGGQKVDAVAWNTTPYQLAQQMSSTVADTVVAAQVNGELYDLERPLETDSDLKFL 123

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD--KEQPFSSDELA 120
           T       AV  HS  H++  A + +     +  GP  E GFY+DF   KE+     EL 
Sbjct: 124 TFSSAEGKAVFWHSSTHVLGAAAEQLL-GAVLCRGPSTECGFYHDFFLGKERTVRGSELP 182

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            +E+  QE++A   PF +  +S ++ R+LF+     +K+ ++E        T+Y  G   
Sbjct: 183 ALEQICQELVAAAHPFRRLEVSQDQLRQLFK--DNPFKLRLIEEKVTGPTATVYGCGMLV 240

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+R TGQ+    KL+  + + WR       L R+ G ++ T +EL  +  +  E
Sbjct: 241 DLCRGPHLRHTGQIGGL-KLLTNSSSLWRSSGTPETLQRVSGISFPTVEELRAWEEWKGE 299

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQV 299
           +E RDHR++ +  +LF   E   G  F+  +G +++  L++++R +  +  + E+ TP +
Sbjct: 300 AELRDHRRIGKAQELFFFHELSPGSCFFLPRGTRVYNALVAFIRAEYTRRGFSEVKTPTL 359

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADD-----------TIKDLRTFALKPMNCPGHVAVF 348
               LW+ SGHW+ Y+ +MF ++               T     T ALKPMNCP H  +F
Sbjct: 360 FSAKLWELSGHWEHYQEDMFVLQPPGSDRLASSLSVCSTSHSTDTLALKPMNCPAHCLMF 419

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
            H  +S+RELP+RLA+FG ++R E SGSL GL R+R F QDDAH+FC  +Q+  E     
Sbjct: 420 AHRPRSWRELPLRLADFGVLHRAEASGSLGGLTRLRCFQQDDAHIFCAPDQLEEEIQGCL 479

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
           + + S+Y   GF   +  LSTRP   +G   LWD AE                       
Sbjct: 480 DFLRSVYAVLGFSFRLA-LSTRPSGFLGESCLWDQAEQ---------------------- 516

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
                      +  L DA+GR  QCGTIQ+DF LP RF+  Y         PV+IHRAV 
Sbjct: 517 ----------IDVHLHDALGRPHQCGTIQLDFQLPLRFDLQYKGQAGVLERPVLIHRAVL 566

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FR 587
           GS+ER +G++ E++ G  PLWLSP Q +V  + +   EYA+E    L++  L  + D   
Sbjct: 567 GSVERMLGVLAESYGGKWPLWLSPFQVVVIPVGAEQEEYAREAQQRLQAAGLVCDLDADS 626

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             T++ ++R   +       + G KE S++++ IR   +    +  L +A+  L +
Sbjct: 627 GLTLSRRVRRAQLAHYNFQFVVGQKEQSKKTVNIRTRDNRQLGERDLTEAVQRLLE 682


>gi|187736219|ref|YP_001878331.1| threonyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835]
 gi|187426271|gb|ACD05550.1| threonyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835]
          Length = 630

 Score =  530 bits (1365), Expect = e-148,   Method: Composition-based stats.
 Identities = 224/609 (36%), Positives = 351/609 (57%), Gaps = 41/609 (6%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           L  +RHSCAH++A A+  +WP+ Q+A GP +++GFYYD + +   S+++  +IE++M+++
Sbjct: 19  LERLRHSCAHVLATAICRLWPDAQLAGGPAVDNGFYYDVELDHRISTEDFERIEEEMKKV 78

Query: 130 IARDSPFLKQYLSHEKARELFES----------KKEAYKVEILESIPAKENVTLYRQGEW 179
           +  +  F K+ +S   A ++ ES          +   +K+++L  IP  E ++LYR G++
Sbjct: 79  VKENQVFQKEVISRADAMKMAESGELGALGPRSEPSRFKIDLLNDIPEDEEISLYRNGDF 138

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLC GPHV  TG  K F K+M VA A+++GD NRPML RIYGT +  + +L ++L  LE
Sbjct: 139 TDLCAGPHVGRTGNCKAF-KIMSVASAFYKGDKNRPMLQRIYGTCFPNRTQLDEHLERLE 197

Query: 240 ESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           E+ +RDHRKL RE+ LF I E    G+I W  KG  I ++L  ++  ++    Y ++ TP
Sbjct: 198 EARRRDHRKLGRELGLFCIDESVGQGLILWKPKGALIRRSLQDFITEELDKLGYSQVYTP 257

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL-------------------RTFALKP 338
            +    L++ SGH+  Y+ + +A     D ++ L                     + LKP
Sbjct: 258 NIGKLDLYRTSGHFPYYQESQYAPIPERDAMEKLSQEGASCAELFNGLATGTIEGYMLKP 317

Query: 339 MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE 398
           MNCP H+ ++ +   SYR+LPVRLAEFG+VYR E SG L G+ RVRGFTQDDAH+FCT +
Sbjct: 318 MNCPHHIKIYANDAHSYRDLPVRLAEFGTVYRWEQSGELGGMTRVRGFTQDDAHIFCTPD 377

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK---RVGSDALWDDAENIMKGVLDTI 455
           Q+  E  +   ++ +I+   G     V+LS R  +    VGS   WD AE  ++   + +
Sbjct: 378 QLAGEIRQCLGIVKTIFGTLGMTDYRVRLSMRDPESDKYVGSPENWDKAEQALREAAEWL 437

Query: 456 KNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS 515
                   +     GE AFYGPK ++I++DAIGR+WQ GT+QVD+NLP RF+  Y  + +
Sbjct: 438 GA------DYSEEAGEAAFYGPKIDFIVRDAIGREWQLGTVQVDYNLPERFDLHYTGADN 491

Query: 516 EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLL 575
           +   PVM+HRA FGS+ERF G++IE+F+G  P WLSP Q  V  I+    + A      L
Sbjct: 492 KPHRPVMVHRAPFGSMERFTGLLIEHFEGKFPTWLSPEQVRVLPISDKVTDVAAAHRTAL 551

Query: 576 KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
            +  + +  D   + I  KIR   + ++P +++ G +EA + ++ +R         +   
Sbjct: 552 AARGVRVTVDETPDKIGAKIRNARLDRVPYMLVLGQREAEDGTVSVRHRDKGDLGAMPFE 611

Query: 636 DAIPILTKE 644
               ++ +E
Sbjct: 612 QFADLVARE 620


>gi|254431853|ref|ZP_05045556.1| threonyl-tRNA synthetase [Cyanobium sp. PCC 7001]
 gi|197626306|gb|EDY38865.1| threonyl-tRNA synthetase [Cyanobium sp. PCC 7001]
          Length = 575

 Score =  530 bits (1364), Expect = e-148,   Method: Composition-based stats.
 Identities = 250/568 (44%), Positives = 333/568 (58%), Gaps = 17/568 (2%)

Query: 77  CAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPF 136
            +H+MA AVQ ++P+ QV IGP  E GFYYDFD   PFS  +L  I+K+M  II R  P 
Sbjct: 1   MSHVMAMAVQKLFPKAQVTIGPWTETGFYYDFDSPDPFSEADLKAIKKEMIRIINRKLPL 60

Query: 137 LKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE-WFDLCRGPHVRSTGQVK 195
            +  +S  +A    +++ E YK+EIL  I   E +TLY  GE W+DLC GPHV +TG++ 
Sbjct: 61  ERLEVSRAEAEARIQAQNEPYKLEILAGI--TEPITLYTLGEEWWDLCAGPHVANTGELN 118

Query: 196 K-FFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMD 254
              F L  VAGAYWRGD N   L RIYGTAW T ++L +Y    EE+ +RDHR+L  ++D
Sbjct: 119 PRAFDLESVAGAYWRGDENNAQLQRIYGTAWETPEQLAEYKRRQEEARRRDHRRLGTDLD 178

Query: 255 LFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWD 312
           LF I ++   G++FWH +G ++   + ++ R       YE + TP V D  LW+ SGH D
Sbjct: 179 LFSIEDEAGAGLVFWHPRGARMRLEIENFWREAHFAAGYELLYTPHVADIGLWKTSGHLD 238

Query: 313 SYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE 372
            Y  +MF     D+     R + LKPMNCP HV  +   L+SYRELP+R AE G+VYR E
Sbjct: 239 FYSESMFGPMQVDE-----REYQLKPMNCPFHVLTYASTLRSYRELPIRWAELGTVYRYE 293

Query: 373 PSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
             G +HGLMRVRGFTQDDAHVFC  EQ+ +E L I +L   I   F F    + LSTRPE
Sbjct: 294 RPGVMHGLMRVRGFTQDDAHVFCLPEQISDEILAILDLTERILSRFDFRSYEINLSTRPE 353

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
           K +G DA+W  A   +   LD      +      V  G GAFYGPK +  ++DAIGR WQ
Sbjct: 354 KSIGEDAVWQLATQGLIEALD------RKGWAYKVDEGGGAFYGPKIDLKIEDAIGRMWQ 407

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
           C TIQ+DFNLP RF+  YV +   +  P+MIHRA+FGS+ERF GIM EN+ G+ P WL+P
Sbjct: 408 CSTIQLDFNLPERFDLHYVAADGSRQRPIMIHRAIFGSLERFFGIMTENYAGDFPFWLAP 467

Query: 553 IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
            Q  +  +T     YA+E+   LK   +    D   + +   IR     KIP++ + G K
Sbjct: 468 EQIRLLPVTDEVRPYAEELLGQLKGAGVRASVDHSGDRLGKLIRNGEQMKIPVLGVIGAK 527

Query: 613 EASERSIGIRRFGSTTTQKVSLLDAIPI 640
           EA   S+ +R         V+    +  
Sbjct: 528 EAETGSVSLRSRRDGDLGCVAASTLLEA 555


>gi|19552881|ref|NP_600883.1| threonyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|21324440|dbj|BAB99064.1| Threonyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
          Length = 686

 Score =  530 bits (1364), Expect = e-148,   Method: Composition-based stats.
 Identities = 235/662 (35%), Positives = 355/662 (53%), Gaps = 41/662 (6%)

Query: 14  IKNFPVHATGSDVAE--SISRSLAKKAVAVA-INGKVCDLSD-PVREGSIEIITPEDPRS 69
           +   P             +     +  V      G++ DLS  P    +   +       
Sbjct: 13  VFEVPAGTAIGAAMRELDLPNKGPEAIVCAKDAEGQLKDLSHVPETTATFTAVPANTDDG 72

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
            AVIRHSCAH++A+AVQ+ +P  ++ IGP IE+GFYYDFD  +PF+ ++L  IEK+M++I
Sbjct: 73  RAVIRHSCAHVLAQAVQAEFPGTKLGIGPAIENGFYYDFDAAEPFTPEDLKTIEKRMKKI 132

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESI----PAKENVTLYRQGE------- 178
           I     F ++     +     E K E YK+E+++      P  +  T    GE       
Sbjct: 133 IKTGQKFERRVYESAE-AAAEELKNEPYKLELIQDKGNVDPNSDEATEVGAGELTAYDNV 191

Query: 179 --------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQE 230
                   W DLCRGPH+ +T  +  F        AYWRGD +   L RIYGTAW  ++ 
Sbjct: 192 NPRTSEVEWSDLCRGPHIPTTRYIPAFALTRSS-AAYWRGDQDNAGLQRIYGTAWEDKES 250

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIK 288
           L  Y   L E+EKRDHR+L  E+DLF   +D GSG+  +H  G  +   +  + RR  I 
Sbjct: 251 LDAYQTMLAEAEKRDHRRLGTELDLFSFPDDLGSGLPVFHPNGGIVRNEMEDHSRRRHIA 310

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD-------DTIKDLRTFALKPMNC 341
             Y  +NTP +  Q L+++SGH   Y+  MF     D       +  K  + + LKPMNC
Sbjct: 311 AGYSFVNTPHITKQDLFERSGHLGFYKDGMFPPMQVDAEFDEDGNVTKPGQEYYLKPMNC 370

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
           P H  +F+   +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDDAH++CT++Q+ 
Sbjct: 371 PMHNLIFDSRGRSYRELPLRLFEFGNVYRYEKSGVIHGLTRARGFTQDDAHIYCTEDQLE 430

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR-VGSDALWDDAENIMKGVLDTIKNSSQ 460
            E   + + I+S+ +D+G +   ++LSTR  K+ VGSD +W+ +  I+  V      ++ 
Sbjct: 431 AELTSVLDFILSLLRDYGLDDFYLELSTRDPKKSVGSDEIWERSTEILNRV------ATN 484

Query: 461 DRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHP 520
             +         AFYGPK     +DAIGR WQ  T+Q+DFN+P RFN  Y +S   K  P
Sbjct: 485 SGLELVPDPEGAAFYGPKISVQARDAIGRTWQMSTVQLDFNMPERFNLEYTSSDGSKQQP 544

Query: 521 VMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHL 580
           +MIHRA+FGSIERF G+++E++ G  P WL+P Q +   +    + + + I   L+   +
Sbjct: 545 IMIHRALFGSIERFFGVLLEHYAGAFPAWLAPHQVMGIPVADDCIPHLETITAQLREKGI 604

Query: 581 SIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
             + D  ++ +  KIR H+  K+P +++ G ++    ++  R    T    V + +AI +
Sbjct: 605 RADVDTSDDRMQKKIRNHTTGKVPFMLLAGARDVEANAVSFRFLDGTQVNGVPVDEAIAV 664

Query: 641 LT 642
           ++
Sbjct: 665 IS 666


>gi|224417829|ref|ZP_03655835.1| threonyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|253827169|ref|ZP_04870054.1| threonyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|313141370|ref|ZP_07803563.1| threonyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|253510575|gb|EES89234.1| threonyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|313130401|gb|EFR48018.1| threonyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
          Length = 605

 Score =  530 bits (1364), Expect = e-148,   Method: Composition-based stats.
 Identities = 237/589 (40%), Positives = 355/589 (60%), Gaps = 20/589 (3%)

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           I     P SLA++RH+CAH+MAEA++S++PE Q  +GP++E+GFYYDF        ++LA
Sbjct: 29  IYFDNSPDSLAIMRHTCAHLMAEAIKSLYPEAQFFVGPVVEEGFYYDFRVNHKIGEEDLA 88

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIP-AKENVTLYRQGEW 179
           +IE KM+EI  +     K +L  ++A E  + K +  K  ++  IP     +++Y QG++
Sbjct: 89  KIESKMKEIAKKGEQITKYHLPRQEAIE--KFKNDDLKQAVISRIPQGDGTLSIYSQGDF 146

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPH+  T ++   FKL K+AGAY  GD    ML RIYG A+  ++ L QYL  +E
Sbjct: 147 EDLCRGPHLP-TLKLLNAFKLTKIAGAYLGGDEKAEMLVRIYGIAFADKESLNQYLRQME 205

Query: 240 ESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
           E++KRDHRK+  EM+LF   E+ G+G+  W  KG ++ + +   + + + +  YE +  P
Sbjct: 206 EAKKRDHRKVGTEMELFTFDEEIGAGLPIWLPKGARLRRNIERLLTKALIQRGYEPVRGP 265

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           ++L   +W+ SGH+ +Y  NM+       T  D   + +KPMNC GH+ V+   L+SYR+
Sbjct: 266 EILKSAVWKTSGHYSNYGENMYF------TTIDGVEYGIKPMNCVGHIKVYQSALRSYRD 319

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R  E+G V+R+E SG LHGL+RVR FTQDDAH+FC   Q+  E   I +    I   
Sbjct: 320 LPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDAHIFCRPSQIATEVENIIDFTKKIMDS 379

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           F F   M ++STRPEK +GSD +W++A   +K  L+         I   +  G GAFYGP
Sbjct: 380 FDFSYEM-EISTRPEKSIGSDEVWEEATQALKNALEICN------IPYKIDEGGGAFYGP 432

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  + DAIGR WQCGTIQ+D NLP RF   Y + ++    PVMIHRA+ GS ERFI I
Sbjct: 433 KIDIKITDAIGRKWQCGTIQIDMNLPERFKLEYTDENNSSKQPVMIHRAILGSFERFIAI 492

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E+F G  P +++P Q I+  +  +   YA+E+ N L + ++  E D +NET+N +IR 
Sbjct: 493 LTEHFGGEFPFFIAPTQIIIIPLGEAQESYAKELRNQLLNVNVYAEIDNKNETLNKRIRN 552

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
              +++P+I++ G KE  E+ + IR         +   + I   +KE +
Sbjct: 553 AEKQRVPMIVVLGAKEEQEKIVAIRDRREKQQSTMGFDEFI-KFSKEKM 600


>gi|223039114|ref|ZP_03609404.1| threonyl-tRNA synthetase [Campylobacter rectus RM3267]
 gi|222879475|gb|EEF14566.1| threonyl-tRNA synthetase [Campylobacter rectus RM3267]
          Length = 606

 Score =  530 bits (1364), Expect = e-148,   Method: Composition-based stats.
 Identities = 237/613 (38%), Positives = 371/613 (60%), Gaps = 24/613 (3%)

Query: 37  KAVAVAINGKVCDLSDPV-REGSIEIITP-EDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
             +A  ++G + D      RE + E I     P +L VIRHSCAH+MA+A++ ++P+ + 
Sbjct: 3   DIIAYKLDGNIVDTQSINGRENAAEPIYYGNSPDALNVIRHSCAHLMAQAIKELYPQAKF 62

Query: 95  AIGPIIEDGFYYDFDKEQPFS---SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFE 151
            +GP +EDGFYYDF  ++  S    ++L  IE KM+E+       LK   S  KA    +
Sbjct: 63  FVGPNVEDGFYYDFKVDEANSKLSDEDLEAIEAKMKELAEAKQDILKA--SSTKAFMSDK 120

Query: 152 SKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGD 211
            K +  K E+L+ IP  E V+ Y+QG + DLCRGPH+ +T  ++ FFKL +VAGAY  GD
Sbjct: 121 FKDDELKQEVLKRIPEGE-VSSYKQGNFEDLCRGPHLPNTKFLR-FFKLTRVAGAYLGGD 178

Query: 212 SNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHR 270
             R M++RIYGTA+  ++ L +++  +EE++KRDHRKL  EM LF   E+ G G+  W  
Sbjct: 179 ETREMINRIYGTAFADKESLKEHIRIIEEAKKRDHRKLGVEMKLFAFDEEVGGGLPIWLP 238

Query: 271 KGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
            G ++   L   + +      YE +  P++L   +W++SGH+ +Y+ NM+       T  
Sbjct: 239 NGGRLRSKLEQILYKAHRDRGYEPVRGPELLKADVWKKSGHYANYKENMYF------TTI 292

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
           D   + +KPMNC GH+ V+   ++SYR+LP++  E+G V+R+E SG LHGL RVR F QD
Sbjct: 293 DEAEYGIKPMNCVGHIKVYQSDIRSYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFAQD 352

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMK 449
           D+H+FC   Q+    L+I      I ++FGF   M ++ST+P K +G D +W+ A   +K
Sbjct: 353 DSHIFCMPSQIKENILEILKFAGKIMENFGFHYEM-EISTKPAKAIGGDEIWETATKALK 411

Query: 450 GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAF 509
             LD      ++    G+  G GAFYGPK +  + DA+ R WQCGTIQVDFNLP RF+  
Sbjct: 412 EALD------ENGFKYGIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDFNLPERFDLG 465

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQ 569
           Y+++++E+  PVM+HRA+ GS ERFIGI+IE+  G LP +++P Q ++  I+ + ++YA+
Sbjct: 466 YIDANNERRQPVMLHRALLGSFERFIGILIEHTGGELPFFVAPTQVVIVPISDAHLDYAK 525

Query: 570 EIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
            +A  L+   +  E   +NE++N +IR    +++P+I + GD E +  +I +R   +   
Sbjct: 526 TVAKELRKIGVDSEIASKNESLNKRIRTAEKQRVPMIAVLGDNEVANSAIALRDRTTREQ 585

Query: 630 QKVSLLDAIPILT 642
           + + L + + +L 
Sbjct: 586 KDMKLDEFVGLLK 598


>gi|305681479|ref|ZP_07404286.1| threonine--tRNA ligase [Corynebacterium matruchotii ATCC 14266]
 gi|305659684|gb|EFM49184.1| threonine--tRNA ligase [Corynebacterium matruchotii ATCC 14266]
          Length = 687

 Score =  529 bits (1363), Expect = e-148,   Method: Composition-based stats.
 Identities = 229/644 (35%), Positives = 354/644 (54%), Gaps = 40/644 (6%)

Query: 32  RSLAKKAVAVAIN--GKVCDLSD-PVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSI 88
            +   +A+ V  +  G + DLS  P  +     I        AVIRHSC H++A+AVQ  
Sbjct: 33  PNTGPEAIVVVKDTEGHLKDLSHVPETDAEFLPIPANTAEGRAVIRHSCTHVLAQAVQQE 92

Query: 89  WPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE 148
           +P  ++ IGP I++GFYYDFD  +PF+ ++L +IEK+M++II +   F ++  + ++A  
Sbjct: 93  FPGTKLGIGPAIDNGFYYDFDVAEPFTPEDLQRIEKRMKKIIKQGQKFERRVYA-DQAEA 151

Query: 149 LFESKKEAYKVEILES-------------IPAKENVTLYRQG------EWFDLCRGPHVR 189
               K E YK+E++               + A E    Y         EW+DLCRGPHV 
Sbjct: 152 AEALKNEPYKLELIADKGSVDPQSDEATEVGAGELTGYYNLNPRTKAVEWYDLCRGPHVP 211

Query: 190 STGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKL 249
           +T  +  F        AYWRGD     L RIYGTAW +   L +Y + + E+EKRDHR+L
Sbjct: 212 TTKYIPAFALTRSS-AAYWRGDQANAGLQRIYGTAWESPDALAEYQHKMAEAEKRDHRRL 270

Query: 250 AREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQ 307
            +E+DLF   ++ GSG   +H  G  +   +  + RR  I   Y  +NTP +    L+++
Sbjct: 271 GQELDLFSFPDEIGSGFPVFHPNGGIVRLEMEEHSRRRHIAAGYSFVNTPHLTKGELFEK 330

Query: 308 SGHWDSYRANMFAVKCADDT-------IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           SGH D Y   MF     D          K    +  KPMNCP H  +F    +SYRELP+
Sbjct: 331 SGHLDFYADGMFPPMKLDGEVDADGNVTKPAVDYYTKPMNCPMHNLIFASRGRSYRELPL 390

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RL EFG+VYR E SG +HGL R RGFTQDDAH++CT++Q+  E   + + +IS+ +D+G 
Sbjct: 391 RLFEFGTVYRYEKSGVIHGLTRARGFTQDDAHIYCTEDQLEAELTSVLDFVISLLRDYGL 450

Query: 421 EKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           +   ++LST+  +  VGSD +W+ +  I++ V D      +  ++     G  AFYGPK 
Sbjct: 451 DDFYLELSTKDPEKFVGSDEIWEKSTAILQRVAD------KSGLDLVPDPGGAAFYGPKI 504

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
               +DAIGR WQ  T+Q+DFNLP RF+  Y      K  P+MIHRA+FGSIERF G+++
Sbjct: 505 SVQARDAIGRTWQMSTVQLDFNLPDRFHLEYTAPDGTKKQPIMIHRALFGSIERFFGVLL 564

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E++ G  P WL+P Q +   +  + + + + + N L++  +    D  ++ +  KIR ++
Sbjct: 565 EHYAGAFPAWLAPQQVMGIPVADTFIPHLESVINELQARGVRASVDTSDDRMQKKIRTYT 624

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             K+P +++ G ++   +++  R    +    V +  AI ++ +
Sbjct: 625 QAKVPFMLLAGARDVEAQAVSFRFLDGSQLNGVPVAQAISLIDE 668


>gi|68536143|ref|YP_250848.1| threonyl-tRNA synthetase [Corynebacterium jeikeium K411]
 gi|123748238|sp|Q4JVC7|SYT_CORJK RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|68263742|emb|CAI37230.1| thrS [Corynebacterium jeikeium K411]
          Length = 691

 Score =  529 bits (1363), Expect = e-148,   Method: Composition-based stats.
 Identities = 234/630 (37%), Positives = 347/630 (55%), Gaps = 40/630 (6%)

Query: 45  GKVCDLSD-PVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG 103
           G++ DLS  P ++  +  +         VIRHSCAH++A+AVQ  +P  ++ IGP I++G
Sbjct: 50  GQLRDLSWVPQQDVEVAAVPANTDEGRGVIRHSCAHVLAQAVQKEFPGTKLGIGPAIDNG 109

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQ-YLSHEKARELFESKKEAYKVEIL 162
           FYYDF   +PF+ ++L ++EK M++II     F ++ Y   E+AR   E   E +K E++
Sbjct: 110 FYYDFQVAEPFTPEDLNKLEKTMKKIIKSGQKFERKAYDDVEQARA--EYADEPFKTELI 167

Query: 163 ESI----PAKENVTLYRQGE---------------WFDLCRGPHVRSTGQVKKFFKLMKV 203
                  P  +  T    GE               W+DLCRGPHV +T  +  F      
Sbjct: 168 ADKGNVDPDSDEATEVGAGELTAYSNVNPRTGEVEWYDLCRGPHVPTTRYIPAFALTRSS 227

Query: 204 AGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-G 262
             AYWRGD ++  L RIYGTAW +++ L +Y   + E+EKRDHR+L +E+DLF   ++ G
Sbjct: 228 -AAYWRGDQSKAGLQRIYGTAWESKEALAEYQTMMAEAEKRDHRRLGQELDLFSFPDEIG 286

Query: 263 SGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG   +H  G  +   +  + R R I   Y  +NTP V    L+Q+SGH D Y   MF  
Sbjct: 287 SGFPVFHPDGGIVRLEMEEHSRKRHIASGYSFVNTPHVTKGDLFQKSGHLDFYADGMFPP 346

Query: 322 KCADDTIKDL-------RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
              D    D        + +  KPMNCP H  +F    +SYRELP+RL EFG+VYR E S
Sbjct: 347 MQLDGETDDEGNVTKPAQDYYAKPMNCPMHNLIFASRGRSYRELPLRLFEFGTVYRYEKS 406

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK- 433
           G +HGL R RGFTQDDAH++CT++Q+  E   +   IIS+ +D+G +   ++LST+    
Sbjct: 407 GVIHGLTRARGFTQDDAHIYCTEDQLEQELTTVLEFIISLLRDYGLDDFYLELSTKDPNK 466

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
            VGSD +W+ +  I++ V      +++  +         AFYGPK     +DAIGR WQ 
Sbjct: 467 FVGSDEIWERSTEILERV------ATKSGLELVPDPAGAAFYGPKISVQARDAIGRTWQM 520

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI 553
            T+Q+DFNLP RFN  Y      K  P+MIHRA+FGSIERF G+++E++ G  P WL+P 
Sbjct: 521 STVQLDFNLPERFNLEYTAPDGSKQRPIMIHRALFGSIERFFGVLLEHYAGAFPAWLAPH 580

Query: 554 QAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
           Q +   +     EY +  A  L++  +  E D  ++ +  KIR H+  K+P +++ G ++
Sbjct: 581 QVVGIPVADEFNEYLENFAADLRAQGIRAEVDTSDDRMQKKIRNHTTGKVPFMLLVGGRD 640

Query: 614 ASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
               ++  R    T    V   DA+ I++ 
Sbjct: 641 VEANAVSFRFLDGTQVNGVPREDALRIISN 670


>gi|269986430|gb|EEZ92716.1| threonyl-tRNA synthetase [Candidatus Parvarchaeum acidiphilum
           ARMAN-4]
          Length = 635

 Score =  529 bits (1363), Expect = e-148,   Method: Composition-based stats.
 Identities = 248/645 (38%), Positives = 397/645 (61%), Gaps = 25/645 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K+ + +G  K F       ++A  ++    K  +   ING++ DLS  +  +G I+  T
Sbjct: 1   MKIIY-NGKEKEFKNGEKAIEIARELNA--PKDIIVAEINGRLIDLSAEIKEDGEIKFFT 57

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D     V  HS AHI+A AV+ ++P+  + IGP I++GFYYD         ++L +IE
Sbjct: 58  FKDKTGKKVFWHSSAHILATAVKRLYPDAVLGIGPAIDEGFYYDI-YNLKVGDNDLEKIE 116

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M+ ++     F ++ +S E+A EL +     +K+EI+E +    N+++YR GE++DLC
Sbjct: 117 KEMENVVKEKLKFERKDISKEEAVELLK--NNKFKLEIIEGVNG--NLSIYRNGEFYDLC 172

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPH+ ST  +    KL+KV+GAYW+GD+ R +++RIYG ++ ++++L +YL  +EE ++
Sbjct: 173 RGPHIPSTEYLG-AVKLLKVSGAYWKGDNKREVMTRIYGISFPSKKDLEEYLKLIEERKE 231

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
            DH+K+ +E++LF  ++   G  F+  KG  I+  L+ + +    K DY EI TP +   
Sbjct: 232 HDHKKIGKELELFEFSDLSPGSPFFTTKGTIIYNELLKFAKELDKKYDYTEIITPIIAKI 291

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGH+D Y+ NMF V   +        + LKPMNCP    +F    +SYR+LP+RL
Sbjct: 292 DLWKISGHFDKYKENMFRVTPFESD----EEYGLKPMNCPFSALLFKSKTRSYRDLPMRL 347

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           +++G ++R E  G+L GL+R R   Q+D+HV+ T+EQ+ +E +++ N++   YK F F+ 
Sbjct: 348 SDYGFLHRYELEGTLDGLLRTRLMEQNDSHVYVTEEQIESEIIRMFNILDDTYKPFNFKP 407

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           IMV L+TRPEKR+G +ALWD AE I+KG LD      +      +  G+GAFYGPK +  
Sbjct: 408 IMV-LATRPEKRIGEEALWDKAEGILKGALD------KKGYKYEIKEGDGAFYGPKIDIY 460

Query: 483 LKDAIGR---DWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           + D  GR    +   TIQ+DFNL  RF+A Y+   +++  P++IHR++ G+I RF+GI++
Sbjct: 461 VLDFSGRVEDAYAVSTIQLDFNLAVRFDAKYIGKDNKEHFPIVIHRSIMGTIGRFMGIIL 520

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           EN KG LP+WL+P+Q  V TIT    EYA+ I   LK +++  E+D  N T++YKIR+  
Sbjct: 521 ENLKGELPVWLAPVQVKVLTITERNNEYAEGIIKKLKDNNIREESDIENGTLDYKIRKAQ 580

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           ++KIP II+ GDKE  +++I +R     T   V + + I  L  +
Sbjct: 581 LEKIPFIIVIGDKEEEKKTIAVRNRKGKTRYNVDIDEFIKNLLND 625


>gi|254692867|ref|NP_001157089.1| threonyl-tRNA synthetase, mitochondrial isoform 2 [Mus musculus]
 gi|14290460|gb|AAH08995.1| Tars2 protein [Mus musculus]
          Length = 697

 Score =  529 bits (1362), Expect = e-148,   Method: Composition-based stats.
 Identities = 220/667 (32%), Positives = 343/667 (51%), Gaps = 56/667 (8%)

Query: 5   IKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           IK++ P+G  +     + T   +A  IS +LA  AVA  +NG++ DL  P+  +  +  +
Sbjct: 66  IKISLPEGQKVDAVAWNTTPYQLAHQISVTLADTAVAAEVNGELYDLDRPLETDCHLRFL 125

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD--KEQPFSSDELA 120
           T + P   AV  HS AH++  A +       +  GP  E GFY+DF   KE+   S EL 
Sbjct: 126 TFDSPEGKAVFWHSSAHVLGAAAEQQL-GAVLCRGPSTESGFYHDFFLGKERTVRSAELP 184

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            +E+  QE+IA   PF +   S ++ R+LF+     +K+ ++E        T+Y  G   
Sbjct: 185 ILERICQELIAAAQPFRRLEASRDQLRQLFKDNH--FKLHLIEEKVTGPTATVYGCGMSV 242

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+R TGQ+    KL+  + A WR       L R+ G ++   + L  +    E 
Sbjct: 243 DLCRGPHLRHTGQIG-ALKLLTNSSALWRSLGAPETLQRVSGISFPKVELLRNWEARREA 301

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQV 299
           +E RDHR++ +E +LF   E   G  F+  +G +++  L++++R +  +  + E+ TP +
Sbjct: 302 AELRDHRRIGKEQELFFFHELSPGSCFFLPRGTRVYNALVAFIRAEYARRGFSEVKTPTL 361

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKD-----------LRTFALKPMNCPGHVAVF 348
               LW+QSGHW+ YRA+MF++K       D             T ALKPMNCP H  +F
Sbjct: 362 FSTKLWEQSGHWEHYRADMFSLKPPGTDGVDNSQSGHPARCPKDTLALKPMNCPAHCLMF 421

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
            H  +S+RELPVRLA+FG+++R E SGSL GL R+  F QDDAH+FC   Q+  E     
Sbjct: 422 AHRPRSWRELPVRLADFGALHRAEASGSLGGLTRLWRFQQDDAHIFCAPHQLEAEIQGCL 481

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
           + +  +Y   GF   +  LSTRP   +G   LWD AE                       
Sbjct: 482 DFLRCVYSVLGFSFHLA-LSTRPPGFLGEPRLWDQAEQ---------------------- 518

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
                      +  L DA+GR  QCGTIQ+DF LP RF+  Y         PV+IHRAV 
Sbjct: 519 ----------IDVHLHDALGRPHQCGTIQLDFQLPLRFDLQYKGPAGTPECPVLIHRAVL 568

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FR 587
           GS+ER +G++ E+  G  PLWLSP+Q +V  + +   EYA+++   L++  L  + D   
Sbjct: 569 GSVERLLGVLAESCGGKWPLWLSPLQVVVIPVRTEQEEYARQVQQCLQAAGLVSDLDADS 628

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK--ES 645
             T++ ++R   +       + G +E S+R++ +R   +    +  L +++  L +   +
Sbjct: 629 GLTLSRRVRRAQLAHYNFQFVVGQREQSQRTVNVRTRDNRQLGERDLAESVQRLLELQNA 688

Query: 646 LPPDCQK 652
             P+ ++
Sbjct: 689 RVPNAEE 695


>gi|225021291|ref|ZP_03710483.1| hypothetical protein CORMATOL_01310 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224946024|gb|EEG27233.1| hypothetical protein CORMATOL_01310 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 700

 Score =  529 bits (1362), Expect = e-148,   Method: Composition-based stats.
 Identities = 230/644 (35%), Positives = 355/644 (55%), Gaps = 40/644 (6%)

Query: 32  RSLAKKAVAVAIN--GKVCDLSD-PVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSI 88
            +   +A+ V  +  G + DLS  P  +     I        AVIRHSC H++A+AVQ  
Sbjct: 46  PNTGPEAIVVVKDTEGHLKDLSHVPETDAEFLPIPANTAEGRAVIRHSCTHVLAQAVQQE 105

Query: 89  WPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE 148
           +P  ++ IGP I++GFYYDFD  +PF+ ++L +IEK+M++II +   F ++  + ++A  
Sbjct: 106 FPGTKLGIGPAIDNGFYYDFDVAEPFTPEDLQRIEKRMKKIIKQGQKFERRVYA-DQAEA 164

Query: 149 LFESKKEAYKVEILES-------------IPAKENVTLYRQG------EWFDLCRGPHVR 189
               K E YK+E++               + A E    Y         EW+DLCRGPHV 
Sbjct: 165 AEALKNEPYKLELIADKGSVDPQSDEATEVGAGELTGYYNLNPRTKAVEWYDLCRGPHVP 224

Query: 190 STGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKL 249
           +T  +  F        AYWRGD     L RIYGTAW +   L +Y + + E+EKRDHR+L
Sbjct: 225 TTKYIPAFALTRSS-AAYWRGDQANAGLQRIYGTAWESPDALAEYQHKMAEAEKRDHRRL 283

Query: 250 AREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQ 307
            +E+DLF   ++ GSG   +H  G  +   +  + RR  I   Y  +NTP +    L+++
Sbjct: 284 GQELDLFSFPDEIGSGFPVFHPNGGIVRLEMEEHSRRRHIAAGYSFVNTPHLTKGELFEK 343

Query: 308 SGHWDSYRANMFAVKCADDT-------IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           SGH D Y   MF     D          K    + +KPMNCP H  +F    +SYRELP+
Sbjct: 344 SGHLDFYADGMFPPMKLDGEVDADGNVTKPAVDYYVKPMNCPMHNLIFASRGRSYRELPL 403

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RL EFG+VYR E SG +HGL R RGFTQDDAH++CT++Q+  E   + + +IS+ +D+G 
Sbjct: 404 RLFEFGTVYRYEKSGVIHGLTRARGFTQDDAHIYCTEDQLEAELTSVLDFVISLLRDYGL 463

Query: 421 EKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           +   ++LST+  +  VGSD +W+ +  I++ V D      +  ++     G  AFYGPK 
Sbjct: 464 DDFYLELSTKDPEKFVGSDEIWEKSTAILQRVAD------KSGLDLVPDPGGAAFYGPKI 517

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
               +DAIGR WQ  T+Q+DFNLP RF+  Y      K  P+MIHRA+FGSIERF G+++
Sbjct: 518 SVQARDAIGRTWQMSTVQLDFNLPDRFHLEYTAPDGTKKQPIMIHRALFGSIERFFGVLL 577

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E++ G  P WL+P Q +   +  + V + + + N L++  +    D  ++ +  KIR ++
Sbjct: 578 EHYAGAFPAWLAPQQVMGIPVADTFVPHLESVINELQARGVRASVDTSDDRMQKKIRTYT 637

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             K+P +++ G ++   +++  R    +    V +  AI ++ +
Sbjct: 638 QAKVPFMLLAGARDVEAQAVSFRFLDGSQLNGVPVAQAISLIDE 681


>gi|145295791|ref|YP_001138612.1| threonyl-tRNA synthetase [Corynebacterium glutamicum R]
 gi|140845711|dbj|BAF54710.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 686

 Score =  529 bits (1362), Expect = e-148,   Method: Composition-based stats.
 Identities = 235/662 (35%), Positives = 355/662 (53%), Gaps = 41/662 (6%)

Query: 14  IKNFPVHATGSDVAE--SISRSLAKKAVAVA-INGKVCDLSD-PVREGSIEIITPEDPRS 69
           +   P             +     +  V      G++ DLS  P    +   +       
Sbjct: 13  VFEVPAGTAIGAAMRELDLPNKGPEAIVCAKDAEGQLKDLSHVPEATATFTAVPANTDDG 72

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
            AVIRHSCAH++A+AVQ+ +P  ++ IGP IE+GFYYDFD  +PF+ ++L  IEK+M++I
Sbjct: 73  RAVIRHSCAHVLAQAVQAEFPGTKLGIGPAIENGFYYDFDVAEPFTPEDLKTIEKRMKKI 132

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESI----PAKENVTLYRQGE------- 178
           I     F ++     +     E K E YK+E+++      P  +  T    GE       
Sbjct: 133 IKTGQKFERRVYESAE-AAAEELKNEPYKLELIQDKGNVDPNSDEATEVGAGELTAYDNV 191

Query: 179 --------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQE 230
                   W DLCRGPH+ +T  +  F        AYWRGD +   L RIYGTAW  ++ 
Sbjct: 192 NPRTSEVEWSDLCRGPHIPTTRYIPAFALTRSS-AAYWRGDQDNAGLQRIYGTAWEDKES 250

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIK 288
           L  Y   L E+EKRDHR+L  E+DLF   +D GSG+  +H  G  +   +  + RR  I 
Sbjct: 251 LDAYQTMLAEAEKRDHRRLGTELDLFSFPDDLGSGLPVFHPNGGIVRNEMEDHSRRRHIA 310

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD-------DTIKDLRTFALKPMNC 341
             Y  +NTP +  Q L+++SGH   Y+  MF     D       +  K  + + LKPMNC
Sbjct: 311 AGYSFVNTPHITKQDLFERSGHLGFYKDGMFPPMQVDAEFDEDGNVTKPGQEYYLKPMNC 370

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
           P H  +F+   +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDDAH++CT++Q+ 
Sbjct: 371 PMHNLIFDSRGRSYRELPLRLFEFGNVYRYEKSGVIHGLTRARGFTQDDAHIYCTEDQLE 430

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR-VGSDALWDDAENIMKGVLDTIKNSSQ 460
            E   + + I+S+ +D+G +   ++LSTR  K+ VGSD +W+ +  I+  V      ++ 
Sbjct: 431 AELTSVLDFILSLLRDYGLDDFYLELSTRDPKKSVGSDEIWERSTEILNRV------ATN 484

Query: 461 DRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHP 520
             +         AFYGPK     +DAIGR WQ  T+Q+DFN+P RFN  Y +S   K  P
Sbjct: 485 SGLELVPDPEGAAFYGPKISVQARDAIGRTWQMSTVQLDFNMPERFNLEYTSSDGSKQQP 544

Query: 521 VMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHL 580
           +MIHRA+FGSIERF G+++E++ G  P WL+P Q +   +    + + + I   L+   +
Sbjct: 545 IMIHRALFGSIERFFGVLLEHYAGAFPAWLAPHQVMGIPVADDCIPHLETITAQLREKGI 604

Query: 581 SIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
             + D  ++ +  KIR H+  K+P +++ G ++    ++  R    T    V + +AI +
Sbjct: 605 RADVDTSDDRMQKKIRNHTTGKVPFMLLAGARDVEANAVSFRFLDGTQVNGVPVDEAIAV 664

Query: 641 LT 642
           ++
Sbjct: 665 IS 666


>gi|262197934|ref|YP_003269143.1| threonyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
 gi|262081281|gb|ACY17250.1| threonyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
          Length = 628

 Score =  528 bits (1359), Expect = e-147,   Method: Composition-based stats.
 Identities = 245/624 (39%), Positives = 356/624 (57%), Gaps = 48/624 (7%)

Query: 61  IITPEDP-----RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFS 115
           I+T           L  IRHS AH+MA AV ++WP+ ++A GP   DGFYYDF  E  FS
Sbjct: 3   ILTRHSEASEAEEQLHRIRHSTAHLMAAAVCTLWPDTKLAFGPPTGDGFYYDFLTEHRFS 62

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
             +   I KKM+E+I RD  F ++ +S   A +LFE + E  K E +  +   E ++LY 
Sbjct: 63  EQDFKAITKKMRELIKRDERFERREISKADALKLFEGQGEMLKAEHVGKLTDGE-ISLYE 121

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
            GE+ DLC GPHV ST  +  F KL  V+ +YW GD  R  L RIYGTAW T++EL ++L
Sbjct: 122 TGEFVDLCSGPHVDSTRDLGHF-KLTAVSSSYWLGDETREGLQRIYGTAWRTKEELKEHL 180

Query: 236 YFLEESEKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRRKIKDD---- 290
             LEE+++RDHR L R++ LF+  E  G G+ F+   G ++ Q L  +M +         
Sbjct: 181 RRLEEAKRRDHRVLGRDLKLFNFPELAGPGLPFYLPHGARMLQELKDWMWKLNISGDYGH 240

Query: 291 ----YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL--------------- 331
               YE ++TP +L    W  SGH  +YR NMF V   D+  + L               
Sbjct: 241 PDKVYEPVSTPHILKTTAWSISGHLQNYRDNMFLVYSLDELDEGLLKPQEAAEAKEQAEA 300

Query: 332 ----------RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
                       + LKPMNCPGH+ ++  G KSYR++PVR  EFG+VYR E +G+LHGL+
Sbjct: 301 EADAAKELGLGNYGLKPMNCPGHIMMYKVGNKSYRDMPVRFFEFGTVYRYERTGTLHGLL 360

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALW 441
           RVR FTQDDAH+FCT EQ+ +E     +    +    GF+  +  L TR E  +GSD  W
Sbjct: 361 RVRSFTQDDAHLFCTAEQLPDELAGAFDFCCFVLDTLGFDYYVA-LKTRGENTIGSDENW 419

Query: 442 DDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFN 501
           + AE  ++ +L+             V  G+ AFYGPK ++I++D +GR+WQ GT+Q+DFN
Sbjct: 420 NLAEKALRDILEARAPG-----KYFVEEGDAAFYGPKVDFIIRDCLGREWQGGTVQLDFN 474

Query: 502 LPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT 561
           LP RF+  +V+ ++++  PVMIHRAVFGS ERF G+M+E F G  PLW +P+Q  V  I+
Sbjct: 475 LPERFDLEFVDENNQRQRPVMIHRAVFGSFERFFGLMVEEFGGAFPLWCAPVQVRVLPIS 534

Query: 562 SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
              ++YA+ +   L+   L +E D   +T+  KIR    +K+P +++ G+ EA++ ++ +
Sbjct: 535 DPYLDYARTVVAALRKQGLRVELDDGRDTLGKKIRNGKTQKVPYLVVVGENEATDNTVTV 594

Query: 622 RRFGSTTTQKVSLLDA-IPILTKE 644
             +      +V   DA I  +  E
Sbjct: 595 ESYFDGRLGEVKTTDALIERMRDE 618


>gi|224373363|ref|YP_002607735.1| threonyl-tRNA synthetase [Nautilia profundicola AmH]
 gi|254783530|sp|B9L5U7|SYT_NAUPA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|223589770|gb|ACM93506.1| threonyl-tRNA synthetase [Nautilia profundicola AmH]
          Length = 611

 Score =  528 bits (1359), Expect = e-147,   Method: Composition-based stats.
 Identities = 249/614 (40%), Positives = 378/614 (61%), Gaps = 17/614 (2%)

Query: 36  KKAVAVAINGKVCDLSDPVREG--SIEIITPE-DPRSLAVIRHSCAHIMAEAVQSIWPEV 92
           +  +A+ I+ K+ DL     +G    E +  +  P +L VIRHS AH+MA+A++ ++PE 
Sbjct: 3   QDVIALKIDDKIIDLQTAEAQGIEGGEPVYFDNSPEALEVIRHSAAHLMAQAIKELYPEA 62

Query: 93  QVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFES 152
           +  +GP IE+GFYYD   E P +  +L  IEKKM+ +  +     +  +S E+ARE  + 
Sbjct: 63  KFYVGPTIENGFYYDLKTETPITDKDLKNIEKKMKALAKKKFDITRYEISMEEARE--KF 120

Query: 153 KKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDS 212
           K +  K  +L+ IP    V++Y+QG++ DLCRGPHV +T  +    KL KVAGAY  GDS
Sbjct: 121 KNDELKQAVLDMIPGD-TVSIYKQGDFEDLCRGPHVPNTKYLHNV-KLQKVAGAYLGGDS 178

Query: 213 NRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRK 271
              ML+R+YGTA+ T++ L +YL  LEE+ KRDHRKL  E++L+   E+   G+  W   
Sbjct: 179 KNEMLTRVYGTAFATKEALQEYLKMLEEAAKRDHRKLGTELELWMFDEEVGAGMPIWLPN 238

Query: 272 GWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCA-DDTIK 329
           G  +   L   +    I+ +Y  +  P++L  H+W+ SGH+ +Y+ NM+  +   DD  K
Sbjct: 239 GALLRGNLEKLLYSAHIRREYLPVRGPELLRSHMWKISGHYYNYKENMYFTEIENDDPEK 298

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
               + +KPMNC  HV +F H ++SY+ELP+RL EFG+V+R+E SG LHGL+RVR FTQD
Sbjct: 299 PADEYGIKPMNCLAHVKIFGHKVRSYKELPLRLFEFGTVHRHEKSGVLHGLLRVREFTQD 358

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMK 449
           DAH+FC  +Q+  E +K+   + SI + FGF   M ++STRPEK +GSD +W+ A   +K
Sbjct: 359 DAHIFCRPDQIEEEVIKVLEFVDSIMERFGFNYEM-EISTRPEKSIGSDEIWEKATESLK 417

Query: 450 GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAF 509
             L+++          G+  G GAFYGPK +  + DAIGR WQCGTIQVDFNLP RF+  
Sbjct: 418 KALNSLNR------EYGIDEGGGAFYGPKIDIKITDAIGRKWQCGTIQVDFNLPERFDIT 471

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQ 569
           YV+ ++E+  PVMIHRA+ GS ERFI I+ E++ G  P +++PI+AI   I  S VEYA+
Sbjct: 472 YVDENNERVRPVMIHRAIIGSFERFIAILTEHYAGEFPTFIAPIKAIFVPIAESHVEYAK 531

Query: 570 EIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           ++   L    ++ E    N+++N +IR    +++  ++I GD+E    ++ IR       
Sbjct: 532 KLQKELLEADINTEIFASNDSLNKRIRNAEKRRVGYVVIIGDEEVETGTVAIRDRKKREQ 591

Query: 630 QKVSLLDAIPILTK 643
            K++  + + ++  
Sbjct: 592 YKMTKGEFVEMIKN 605


>gi|323142407|ref|ZP_08077233.1| threonine--tRNA ligase [Phascolarctobacterium sp. YIT 12067]
 gi|322413100|gb|EFY03993.1| threonine--tRNA ligase [Phascolarctobacterium sp. YIT 12067]
          Length = 597

 Score =  528 bits (1359), Expect = e-147,   Method: Composition-based stats.
 Identities = 208/589 (35%), Positives = 316/589 (53%), Gaps = 17/589 (2%)

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            E+        H+C+H++A+A++ + P+V++AIGP I++GFYYDFD   PF+ ++LA +E
Sbjct: 9   FENKEYRQTYWHTCSHVLAQAMKRLHPDVKLAIGPSIDNGFYYDFDTPAPFTPEDLAALE 68

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M++I        +  L   +A +  E K+E YKVE++  +P    ++ Y+QG++ DLC
Sbjct: 69  GEMRKICKEKLKLERFELPRAEAVKFMEEKEEPYKVELINDLPEDAVISFYKQGDFTDLC 128

Query: 184 RGPHVRSTGQVK-KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
            GPH+ STG++K    KL    GAYWRGDSNR ML RIYG A+  ++EL  YL    E+ 
Sbjct: 129 AGPHLDSTGRIKGNAIKLTSATGAYWRGDSNRKMLQRIYGIAFPKKEELDAYLEQQAEAL 188

Query: 243 KRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           KRDH KL R+++ F      G G+     KG ++ Q L  ++   + K  Y    TP + 
Sbjct: 189 KRDHNKLGRDLEYFTTVDYIGQGLPILLPKGARVIQLLQRWVEDVEQKRGYLLTKTPLMA 248

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            + L++ SGHWD Y   MF +    D  K+   FAL+PM CP    VF +  +SYRELP+
Sbjct: 249 KRDLYRISGHWDHYLDGMFILGDPHDETKE--CFALRPMTCPFQYQVFLNRQRSYRELPM 306

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RL E  +++RNE SG +HGL+RVR FT  + H+    +Q+  E     +L     +  G 
Sbjct: 307 RLGETSTLFRNEDSGEMHGLIRVRQFTISEGHLILRPDQLEEEFKGCLDLAKYCLETVGM 366

Query: 421 EKIM------VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
                        +    K  G+   WD A+  MK +LD +       +N  V   E AF
Sbjct: 367 LDKCTFRFSQWNPANPNNKYEGTAEQWDHAQAAMKKILDDLG------VNYEVGFDEAAF 420

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +    +  G++    TIQ+D  L  +F  +YV+ + EK  P +IHR   G  ER 
Sbjct: 421 YGPKLDIQFHNVFGKEDTIVTIQIDMLLAEKFGMYYVDENGEKKLPYIIHRTSLGCYERT 480

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
           +  +IE + G LP W++P Q     +T  AV+Y  E+A+ L+++      D RNE I  K
Sbjct: 481 LAYLIETYAGALPTWMAPEQVRFLPVTDRAVDYCYELAHKLEANGYRATVDARNEKIGKK 540

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           IRE  ++KIP +++ GD++    ++  R         +S      IL  
Sbjct: 541 IREGQLEKIPYMLVVGDRDMENNTVSPRNRTEGDMGAMSFEAFEAILKD 589


>gi|257459979|ref|ZP_05625083.1| threonyl-tRNA synthetase [Campylobacter gracilis RM3268]
 gi|257442420|gb|EEV17559.1| threonyl-tRNA synthetase [Campylobacter gracilis RM3268]
          Length = 607

 Score =  528 bits (1359), Expect = e-147,   Method: Composition-based stats.
 Identities = 237/614 (38%), Positives = 361/614 (58%), Gaps = 25/614 (4%)

Query: 37  KAVAVAINGKVCDLSDPVREGSIE--IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
             +A  +NG++ D        S    I       +L VIRHSCAH++A+AV+ ++P  + 
Sbjct: 3   DIIAYKLNGEIYDTQSIGERASEAQPIYFDNSEDALKVIRHSCAHLLAQAVRELYPSAKF 62

Query: 95  AIGPIIEDGFYYDF----DKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELF 150
            +GP IEDGFYYD     +  +    ++L  IEKKM+ +   +    K   + E   +  
Sbjct: 63  FVGPAIEDGFYYDMRVSKNGGEKLGEEDLKAIEKKMRALAEANLEIKKIASTKEAVAK-- 120

Query: 151 ESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRG 210
           +   +  K E+L+ IP    V+LY QGE+ D+CRGPHV++T  +K F    ++AGAY  G
Sbjct: 121 KYANDDLKQEVLKRIPEGP-VSLYAQGEFEDICRGPHVQNTKFLKNFALT-RIAGAYLGG 178

Query: 211 DSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIA-EDGSGVIFWH 269
           D  R ML+RIYG  +  +  L ++L  LEE++KRDHRKL  EM  F    + G+G+  W 
Sbjct: 179 DEKREMLTRIYGVVFADKDSLKKHLTMLEEAKKRDHRKLGTEMKFFTFDEQIGAGLPIWL 238

Query: 270 RKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTI 328
             G ++   L   + R+++   YE +  P++L    W+ SGH+ +Y+ NM+       T 
Sbjct: 239 PAGTRMRIKLEGRLYRQLRKRGYEPVRGPEILKSDAWKISGHYSNYKENMYF------TT 292

Query: 329 KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQ 388
            + + + +KPMNC GH+ V+   ++SYR+LP++  E+G V+R+E SG LHGL RVR FTQ
Sbjct: 293 IEEQEYGIKPMNCVGHIKVYQSEIRSYRDLPLKFCEYGVVHRHEKSGVLHGLFRVREFTQ 352

Query: 389 DDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIM 448
           DDAH+F    Q+     +I + +  + K FGFE  + ++ST+P+K VG D +WD A   +
Sbjct: 353 DDAHLFVMPSQIKENVYEILDFVELLMKAFGFEYEL-EISTKPQKAVGDDEVWDIATKAL 411

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
           K  LD      +  +  G+  G GAFYGPK +  + DA+GR WQCGT+QVDFNLP+RF  
Sbjct: 412 KDALD------EKGLKYGLDEGGGAFYGPKIDIKITDALGRKWQCGTVQVDFNLPARFEL 465

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYA 568
            Y++ ++EK  PVM+HRA+ GS ERF+GI++E+  G LP W+ P Q  +  I  +   YA
Sbjct: 466 GYIDENNEKKQPVMLHRAILGSFERFVGILLEHTAGELPFWICPTQVSIVPIGEAHASYA 525

Query: 569 QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
           +EI NLL++  +  E   RNET+N +IR    +K+P+II+ GD E S RS+ +R   +  
Sbjct: 526 KEILNLLRAADIDGEILDRNETLNKRIRTAEKQKVPLIIVLGDNEVSARSVALRDRRARE 585

Query: 629 TQKVSLLDAIPILT 642
            + + L + +  + 
Sbjct: 586 QRNLGLDEFLNFVK 599


>gi|25028341|ref|NP_738395.1| threonyl-tRNA synthetase [Corynebacterium efficiens YS-314]
 gi|23493626|dbj|BAC18595.1| putative threonyl-tRNA synthetase [Corynebacterium efficiens
           YS-314]
          Length = 720

 Score =  528 bits (1359), Expect = e-147,   Method: Composition-based stats.
 Identities = 233/660 (35%), Positives = 357/660 (54%), Gaps = 41/660 (6%)

Query: 16  NFPVHATGSDVAESIS-RSLAKKAVAVAIN--GKVCDLSD-PVREGSIEIITPEDPRSLA 71
             P           ++  +    A+  A +  G++ DLS  P    +   +        A
Sbjct: 49  EVPAGIAIGQAMRELNLPNKGDDAIVCAKDTEGQLKDLSHVPEETATFTAVPANSEDGRA 108

Query: 72  VIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIA 131
           VIRHSCAH++A+AVQ+ +P  ++ IGP IE+GFYYDFD  +PF+ ++L  IEK+M++II 
Sbjct: 109 VIRHSCAHVLAQAVQAEFPGTKLGIGPAIENGFYYDFDVAEPFTPEDLKTIEKRMKKIIK 168

Query: 132 RDSPFLKQYLSHEKARELFESKKEAYKVEILESI----PAKENVTLYRQGE--------- 178
               F ++ +         E   E YK+E+++      P  +  T    GE         
Sbjct: 169 TGQKFERR-VYESTEAAAAELADEPYKLELIQDKGNVDPDSDEATEVGAGELTAYDNVNP 227

Query: 179 ------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELT 232
                 W DLCRGPH+ +T  +  F        AYWRGD     L RIYGTAW ++++L 
Sbjct: 228 RTNEVEWSDLCRGPHIPTTRYIPAFALTRSS-AAYWRGDQTNAGLQRIYGTAWESKEKLD 286

Query: 233 QYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDD 290
           +Y   L E+EKRDHR+L  E+DLF   ++ GSG+  +H  G  +   +  + RR  I+  
Sbjct: 287 EYQTMLAEAEKRDHRRLGTELDLFSFPDEIGSGLPVFHPNGAIVRLEMEEHSRRRHIQAG 346

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD-------DTIKDLRTFALKPMNCPG 343
           Y  +NTP      L+++SGH   Y+  MF     D       +  K  + + LKPMNCP 
Sbjct: 347 YSFVNTPHATKSDLFEKSGHLGFYKEGMFPPLQLDAEYDAEGNQTKPGQDYYLKPMNCPM 406

Query: 344 HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE 403
           H  +F+   +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDDAH++CT++Q+  E
Sbjct: 407 HNLIFDSRGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYCTEDQLEEE 466

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDTIKNSSQDR 462
              +   IIS+ KD+G +   ++LST+  K  VG D +W+ +  I++ V      ++   
Sbjct: 467 LTSVLEFIISLLKDYGLDDFYLELSTKDPKKFVGDDEIWERSTEILQRV------ATNSG 520

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
           ++        AFYGPK     KDAIGR WQ  T+Q+DFNLP RF   Y +    K  P+M
Sbjct: 521 LDLVPDPEGAAFYGPKISVQAKDAIGRTWQMSTVQLDFNLPERFELEYTSPDGSKQRPIM 580

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSI 582
           IHRA+FGSIERF G+++E++ G  P WL+P Q +   +    + + +++ + L++     
Sbjct: 581 IHRALFGSIERFFGVLLEHYAGAFPAWLAPHQVVGIPVAEDFIPHLEKVVDKLRARGFRA 640

Query: 583 ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           E D  ++ +  KIR H+  KIP +++ G ++    ++  R    T    V + +A+ +++
Sbjct: 641 EVDTSDDRMQKKIRTHTTGKIPFMLLAGGRDVEADAVSFRFLDGTQVNGVPVDEAVELIS 700


>gi|326476791|gb|EGE00801.1| threonyl-tRNA synthetase [Trichophyton tonsurans CBS 112818]
          Length = 753

 Score =  528 bits (1359), Expect = e-147,   Method: Composition-based stats.
 Identities = 221/688 (32%), Positives = 344/688 (50%), Gaps = 75/688 (10%)

Query: 4   DIKLTFP--DG---SIKNFPVHATGSDVAESISRSLAKKAVAVAING-KVCDLSDPVR-E 56
           DI +T    DG   ++     H+T     + I + L+   V   ++G ++ DL  P+  +
Sbjct: 80  DITVTLEVGDGAPSTVIAQAWHSTPGSFLKDIPKELSSSVVIAKLDGKELWDLDRPLERD 139

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ--PF 114
             I  +  +      V  HS AH + EA +  +    ++ GP    GF+YD    +    
Sbjct: 140 CRIRYLPFDSVEGREVFWHSSAHALGEACECQY-GCLLSHGPPTAQGFFYDMAIPEGGVV 198

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
           +  +   ++ K  +I      F +  +S E  +++F   K  YK+  ++++   E+ T+Y
Sbjct: 199 TQADYPLLDAKTAKIFKEKQSFDRLEVSKENLKKMFGYSK--YKLHYIDNLVEGESSTVY 256

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
           R G   DL                K+ + + AY+ GD     L RI G A+  ++ L ++
Sbjct: 257 RCGTLVDLQIKAM-----------KITQNSSAYFLGDQTNDALQRIRGVAFPDKKLLQEH 305

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEE 293
           L FLEE+EKR+H K+ +E +LF   E   G  F    G KIF  L   +R + +   Y+E
Sbjct: 306 LKFLEEAEKRNHLKIGKEQELFFFDEVSPGCPFLLPNGTKIFNALQKLLRTEYRKRGYQE 365

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           + +P + D  +W+QSGHW  Y+ +MF +        + R +ALKPMNCPGH  +F H  +
Sbjct: 366 VQSPNMYDVGIWRQSGHWAHYKDDMFKLDV------EKRDWALKPMNCPGHCIMFGHRER 419

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYRELP+R+A+FG ++RNE SG+LHGL RVR F QDD H+FCT  Q+  E   + + + +
Sbjct: 420 SYRELPLRMADFGVLHRNEASGALHGLTRVRKFQQDDTHIFCTDNQIMEEIEGLFDFLRA 479

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           IY  FGF    +KLSTRPEK +G    WD AE  ++  L   K +     +  +  G+GA
Sbjct: 480 IYGLFGF-SFKLKLSTRPEKYLGKLETWDFAEAQLREALTKFKGA-----DWEIDEGDGA 533

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC--------------- 518
           FYGPK +  + DA+ R+ QC TIQ+D+ LP  F   Y+   +                  
Sbjct: 534 FYGPKIDITISDALKREHQCATIQLDYQLPLNFKLEYMTGETIPKSAAPANPKAEAKPEG 593

Query: 519 --------------------HPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVT 558
                                PV+IHRA+ GS ERF GI+IE+F G  P WLSP Q ++ 
Sbjct: 594 DSNPTQAQPSDSSTPGPGRARPVVIHRAIIGSFERFFGILIEHFGGKWPFWLSPRQILIV 653

Query: 559 TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERS 618
            + +SA +Y +E+  +L+   L+++ D    T+  KIR   + +   I + G +E   RS
Sbjct: 654 PVMASANDYVEELQEILRGDKLNVDIDLSGHTMQKKIRNGQLAQYNFIFVVGAQEKESRS 713

Query: 619 IGIRRFGSTTTQK----VSLLDAIPILT 642
           + IR     ++Q     + L +A   L 
Sbjct: 714 VNIRNRDDPSSQTKGSLIPLEEARAKLR 741


>gi|260578838|ref|ZP_05846745.1| threonine--tRNA ligase [Corynebacterium jeikeium ATCC 43734]
 gi|258603136|gb|EEW16406.1| threonine--tRNA ligase [Corynebacterium jeikeium ATCC 43734]
          Length = 667

 Score =  527 bits (1358), Expect = e-147,   Method: Composition-based stats.
 Identities = 234/630 (37%), Positives = 347/630 (55%), Gaps = 40/630 (6%)

Query: 45  GKVCDLSD-PVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG 103
           G++ DLS  P ++  +  +         VIRHSCAH++A+AVQ  +P  ++ IGP I++G
Sbjct: 26  GQLRDLSWAPQQDVEVAAVPANTDEGRGVIRHSCAHVLAQAVQKEFPGTKLGIGPAIDNG 85

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQ-YLSHEKARELFESKKEAYKVEIL 162
           FYYDF   +PF+ ++L ++EK M++II     F ++ Y   E+AR   E   E +K E++
Sbjct: 86  FYYDFQVAEPFTPEDLNKLEKTMKKIIKSGQKFERKAYDDVEQARA--EYADEPFKTELI 143

Query: 163 ESI----PAKENVTLYRQGE---------------WFDLCRGPHVRSTGQVKKFFKLMKV 203
                  P  +  T    GE               W+DLCRGPHV +T  +  F      
Sbjct: 144 ADKGNVDPDSDEATEVGAGELTAYSNVNPRTGEVEWYDLCRGPHVPTTRCIPAFALTRSS 203

Query: 204 AGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-G 262
             AYWRGD ++  L RIYGTAW +++ L +Y   + E+EKRDHR+L +E+DLF   ++ G
Sbjct: 204 -AAYWRGDQSKAGLQRIYGTAWESKEALAEYQTMMAEAEKRDHRRLGQELDLFSFPDEIG 262

Query: 263 SGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG   +H  G  +   +  + R R I   Y  +NTP V    L+Q+SGH D Y   MF  
Sbjct: 263 SGFPVFHPDGGIVRLEMEEHSRKRHIASGYSFVNTPHVTKGDLFQKSGHLDFYADGMFPP 322

Query: 322 KCADDTIKDL-------RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
              D    D        + +  KPMNCP H  +F    +SYRELP+RL EFG+VYR E S
Sbjct: 323 MQLDGETDDEGNVTKPAQDYYAKPMNCPMHNLIFASRGRSYRELPLRLFEFGTVYRYEKS 382

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK- 433
           G +HGL R RGFTQDDAH++CT++Q+  E   +   IIS+ +D+G +   ++LST+    
Sbjct: 383 GVIHGLTRARGFTQDDAHIYCTEDQLEQELTTVLEFIISLLRDYGLDDFYLELSTKDPNK 442

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
            VGSD +W+ +  I++ V      +++  +         AFYGPK     +DAIGR WQ 
Sbjct: 443 FVGSDEIWERSTEILERV------ATKSGLELVPDPAGAAFYGPKISVQARDAIGRTWQM 496

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI 553
            T+Q+DFNLP RFN  Y      K  P+MIHRA+FGSIERF G+++E++ G  P WL+P 
Sbjct: 497 STVQLDFNLPERFNLEYTAPDGSKQRPIMIHRALFGSIERFFGVLLEHYAGAFPAWLAPH 556

Query: 554 QAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
           Q +   +     EY +  A  L++  +  E D  ++ +  KIR H+  K+P +++ G ++
Sbjct: 557 QVVGIPVADEFNEYLENFAADLRAQGIRAEVDTSDDRMQKKIRNHTTGKVPFMLLVGGRD 616

Query: 614 ASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
               ++  R    T    V   DA+ I++ 
Sbjct: 617 VEANAVSFRFLDGTQVNGVPREDALRIISN 646


>gi|149030652|gb|EDL85689.1| threonyl-tRNA synthetase-like 1, isoform CRA_a [Rattus norvegicus]
          Length = 617

 Score =  527 bits (1357), Expect = e-147,   Method: Composition-based stats.
 Identities = 215/667 (32%), Positives = 330/667 (49%), Gaps = 79/667 (11%)

Query: 5   IKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           IK++ P+G  +     + T   +A+ IS +LA  AVA  +NG++ DL  P+  +  +  +
Sbjct: 9   IKISLPEGQKVDAVAWNTTPYQLAQQISSTLADTAVAAEVNGELYDLDRPLETDCHLRFL 68

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD--KEQPFSSDELA 120
           T + P   AV   S AH++  A +       +  GP  E GFY DF   KE+   S EL 
Sbjct: 69  TFDSPEGKAVFWRSSAHVLGAAAEQHL-GAVLCRGPSTESGFYLDFFLGKERTVRSTELP 127

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            +E+  QEII    PF +   S  + R+LF+     +K+ ++E        T+Y  G   
Sbjct: 128 TLERICQEIITAAQPFRRLEASRGQLRQLFKDNH--FKLHVIEEKVTGTTATVYGCGMSV 185

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLC+GPH+R TGQ+                                              
Sbjct: 186 DLCQGPHLRHTGQIG--------------------------------------------- 200

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQV 299
                  KL  E +LF   E   G  F+  +G +I+  L++++R +  +  + E+ TP +
Sbjct: 201 -----ALKLLTEQELFFFHELSPGSCFFLPRGTRIYNALVAFIRAEYARRGFSEVKTPTL 255

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKD-----------LRTFALKPMNCPGHVAVF 348
               LW+QSGHW+ YRA+MF++K       D             T ALKPMNCP H  +F
Sbjct: 256 FSTKLWEQSGHWEHYRAHMFSLKPPGTDGVDSSQSGHPARCPKDTLALKPMNCPAHCLMF 315

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
            H  +S+RELPVRLA+FG ++R E SGSL GL R+  F QDDAH+FC   Q+  E     
Sbjct: 316 AHRPRSWRELPVRLADFGVLHRAEASGSLGGLTRLWRFQQDDAHIFCAPSQLEAEIRGCL 375

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
           + + S+Y   GF   +  LSTRP   +G   LWD AE +++  L+             + 
Sbjct: 376 DFLRSVYSVLGFSFHLA-LSTRPPGFLGEPHLWDQAEKVLQQALEEFGEPWN------LN 428

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
            G+GAFYGPK +  L DA+GR  QCGTIQ+DF LP RF+  Y         PV+IHRAV 
Sbjct: 429 PGDGAFYGPKIDVHLHDALGRPHQCGTIQLDFQLPLRFDLQYKGPAGAPECPVLIHRAVL 488

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FR 587
           GS+ER +G++ E+  G  PLWLSP Q +V  + +   +YA+++   L++  L  + D   
Sbjct: 489 GSVERLLGVLAESCGGRWPLWLSPFQVVVIPVRTEQEDYARQVQQCLQAAGLVSDLDADC 548

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK--ES 645
             T++ ++R   +       + G +E S+ S+ +R   +    +  L +++  L +  ++
Sbjct: 549 GLTLSRRVRRAQLAHYNFQFVVGQREQSQMSVNVRTRDNRQLGERGLAESVQRLLELQDA 608

Query: 646 LPPDCQK 652
             P+ ++
Sbjct: 609 RVPNAEE 615


>gi|318041217|ref|ZP_07973173.1| threonyl-tRNA synthetase [Synechococcus sp. CB0101]
          Length = 570

 Score =  527 bits (1356), Expect = e-147,   Method: Composition-based stats.
 Identities = 245/559 (43%), Positives = 334/559 (59%), Gaps = 17/559 (3%)

Query: 77  CAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPF 136
            +H+MA AVQ ++P+ QV IGP  E+GFYYDFD   PF+  +L  I+K+M +II +  P 
Sbjct: 1   MSHVMAMAVQRLFPKAQVTIGPWTENGFYYDFDSPDPFTEADLKAIKKEMIKIINKKLPL 60

Query: 137 LKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE-WFDLCRGPHVRSTGQVK 195
            +  +S  +A    +++ E YK+EIL  I   E +TLY  GE W+DLC GPHV ST ++ 
Sbjct: 61  ERLEVSRAEAETKIKAQNEPYKLEILAGI--NEPITLYTLGEEWWDLCAGPHVASTAELN 118

Query: 196 -KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMD 254
            K F+L  VAGAYWRGD N   L RIYGTAW T ++L +Y    EE+++RDHR++  ++D
Sbjct: 119 AKAFELESVAGAYWRGDENNAQLQRIYGTAWETPEQLAEYKRRQEEAKRRDHRRIGTDLD 178

Query: 255 LFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWD 312
           LF I ++   G++FWH +G ++   + +  R       YE + TP V D  LW+ SGH D
Sbjct: 179 LFSIEDEAGAGLVFWHPRGARMRLLIENLWRELHFAAGYELLYTPHVADISLWKTSGHLD 238

Query: 313 SYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE 372
            Y  +MF     D+     R + LKPMNCP HV  +   L+SYRELP+R AE G+VYR E
Sbjct: 239 FYSESMFGPMQVDE-----REYQLKPMNCPFHVLTYASTLRSYRELPIRWAELGTVYRYE 293

Query: 373 PSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
             G +HGLMRVRGFTQDDAHVFC  +Q+ +E L I NL   I   F F    + LSTRPE
Sbjct: 294 RPGVMHGLMRVRGFTQDDAHVFCLPDQISDEILAILNLTEQILSTFDFRHYEINLSTRPE 353

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
           K +G DA+W+ A   +   LD      +      +  G GAFYGPK +  ++DAIGR WQ
Sbjct: 354 KSIGEDAVWELATQGLIEALD------RKGWAYKIDEGGGAFYGPKIDLKIEDAIGRMWQ 407

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
           C TIQ+DFNLP RF+  YV +   +  P+MIHRA+FGS+ERF GIM EN+ G+ P WL+P
Sbjct: 408 CSTIQLDFNLPERFDLEYVAADGSRQRPIMIHRAIFGSLERFFGIMTENYAGDFPFWLAP 467

Query: 553 IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
            Q  +  +T    +YA  +A  L++  +    D   + +   IR     KIP++ + G K
Sbjct: 468 EQIRLLPVTDEVRDYAAGVAAELQAAGVRASIDHSGDRLGKLIRNGEQMKIPVLGVIGAK 527

Query: 613 EASERSIGIRRFGSTTTQK 631
           EA    I +R         
Sbjct: 528 EAESGQISLRSRRDGDLGS 546


>gi|319948489|ref|ZP_08022623.1| threonyl-tRNA synthetase [Dietzia cinnamea P4]
 gi|319437856|gb|EFV92842.1| threonyl-tRNA synthetase [Dietzia cinnamea P4]
          Length = 699

 Score =  527 bits (1356), Expect = e-147,   Method: Composition-based stats.
 Identities = 241/653 (36%), Positives = 360/653 (55%), Gaps = 50/653 (7%)

Query: 31  SRSLAKKAVAVAI-NGKVCDLSD-PVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSI 88
           SRS  +  V V    G + DLS  P  +  +E++  +     +VIRHSCAH++A+AVQ  
Sbjct: 40  SRSGPETIVVVRDPEGTLRDLSWAPEADTEVELVRADTEDGRSVIRHSCAHVLAQAVQDK 99

Query: 89  WPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYL-SHEKAR 147
           +PE ++ IGP IE+GFYYDFD  +PF+ ++L  +EK+M++II     F ++   S ++AR
Sbjct: 100 FPEAKLGIGPPIENGFYYDFDVAEPFTPEDLKDLEKRMKKIIKAGQRFSRREYASLDEAR 159

Query: 148 ELFESKKEAYKVEILESIPAKEN---------------------VTLY-----RQGE--W 179
              E   E YK+E++E     +                      +T Y     R GE  W
Sbjct: 160 A--ELAGEPYKLELIEDKGRADAGDESGAEALEDSEIMEVGAGALTAYDNLNPRTGEVIW 217

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPH  +T  +  F        AYWRGD +   L RIYGTAW + + +  YL  L 
Sbjct: 218 SDLCRGPHTPTTKFIPAFTLTRSS-AAYWRGDQSNAGLQRIYGTAWESTEAMDAYLDRLA 276

Query: 240 ESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTP 297
           E+EKRDHR+L  E+DLF   ++ GSG   +H +G  I   +  + +RR +   Y  +NTP
Sbjct: 277 EAEKRDHRRLGTELDLFSFPDEIGSGFPVFHPRGGIIRNEMEQHSLRRHLAAGYSLVNTP 336

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCAD-------DTIKDLRTFALKPMNCPGHVAVFNH 350
            V    L+++S H   Y   MF     D       +  K  + + +KPMNCP H  VF+ 
Sbjct: 337 HVTKGDLFRKSQHLSWYSEGMFPPMVLDAEHDADGNETKPGQDYYVKPMNCPMHNLVFDS 396

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
             +SYRELP+R+ EFG+VYR E SG +HGL R RGFTQDDAH++CT+EQM  E   + + 
Sbjct: 397 RGRSYRELPLRMFEFGTVYRYEKSGVIHGLTRARGFTQDDAHIYCTEEQMEGEIASVLSF 456

Query: 411 IISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL 469
           IIS+ +D+G +   ++LST+  +  VG D LW+ A   ++ V      ++   +      
Sbjct: 457 IISLLRDYGLDDFYLELSTKDPEKYVGGDELWERATETLRRV------ATNSGLELVPDP 510

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG 529
           G  AFYGPK     +DAIGR WQ  T+Q+DFNLP  F+  Y  +   K  PVMIHRA+FG
Sbjct: 511 GGAAFYGPKISVQARDAIGRTWQMSTVQLDFNLPELFDLTYNAADGTKKRPVMIHRALFG 570

Query: 530 SIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE 589
           SIERF  +++E++ G  P WL+P+Q +   +  +  ++ +++ + L+   +  E D  +E
Sbjct: 571 SIERFFAVLLEHYAGLFPAWLAPVQVVGIPVAEAHEKHLEDVIDELRGRGIRAELDTSDE 630

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +  KIR H+  K+P +++ GD++    ++  R    T    VS   A+  + 
Sbjct: 631 RMQKKIRNHTTGKVPFMLLAGDRDVEAGAVSFRFPDGTQLNGVSRNAAMDKIA 683


>gi|227504970|ref|ZP_03935019.1| threonyl-tRNA synthetase [Corynebacterium striatum ATCC 6940]
 gi|227198420|gb|EEI78468.1| threonyl-tRNA synthetase [Corynebacterium striatum ATCC 6940]
          Length = 687

 Score =  527 bits (1356), Expect = e-147,   Method: Composition-based stats.
 Identities = 226/639 (35%), Positives = 350/639 (54%), Gaps = 39/639 (6%)

Query: 35  AKKAVAVA-INGKVCDLS-DPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEV 92
            +  V V   +G + DLS  P  +     +   +    AVIRHS AH+MA+AVQ+ +P  
Sbjct: 37  PEAVVVVRGTDGVLYDLSHTPAVDAEFTPVAASEEDGRAVIRHSTAHVMAQAVQAEFPGT 96

Query: 93  QVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFES 152
           ++ IGP IE+GFY+DF  ++PF+ + L  IEK+M++II     F ++  S          
Sbjct: 97  KLGIGPAIENGFYFDFQTDEPFTPEALKAIEKRMKKIIKTGQRFERRVYS-SNEEAEAAL 155

Query: 153 KKEAYKVEILESI----PAKENVTLYRQGE---------------WFDLCRGPHVRSTGQ 193
             E +K+E+++      P  +       G+               WFDLCRGPH+ +T  
Sbjct: 156 ADEPFKLELIQDKGNVDPDSDEAAEVGAGDLTHYDNINPRTGEVEWFDLCRGPHLPTTKY 215

Query: 194 VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREM 253
           +  F        AYWRGD ++  L RIYGTA+ +++ L  Y + + E+EKRDHR+L +E+
Sbjct: 216 IPAFTLTRSS-AAYWRGDQSKAGLQRIYGTAFESKEALEAYQHMIAEAEKRDHRRLGQEL 274

Query: 254 DLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHW 311
           DLF   ++ GSG   +H  G  +   +  + RR  I+D Y  ++TP +    L+++SGH 
Sbjct: 275 DLFSFPDEIGSGFPVFHPNGAVVRMEMEEHSRRRHIQDGYSFVSTPHLTKGDLFKKSGHL 334

Query: 312 DSYRANMFAVKCADDTIKDL-------RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           D Y   MF     D    +        + +  KPMNCP H  +F    +SYRELP+RL E
Sbjct: 335 DFYADGMFPPMQLDGEYDEDGNCTKQPQDYYAKPMNCPMHNLIFASRGRSYRELPLRLFE 394

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FG+VYR E SG +HGL R RGFTQDD+H++CT EQ+ +E  K+ + IIS+ KD+G +   
Sbjct: 395 FGTVYRYEKSGVIHGLTRARGFTQDDSHIYCTPEQLEDELTKVLDFIISLLKDYGLDDFY 454

Query: 425 VKLSTRPEK-RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           ++LST+     VGSD +W+ + +I++ V +      +  +         AFYGPK     
Sbjct: 455 LELSTKDPNKYVGSDEIWERSTSILQSVAE------KSGLELVPDPAGAAFYGPKISVQA 508

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +DAIGR WQ  T+Q+DFNLP RF   Y  S   K  P+MIHRA+FGSIERF G+++E++ 
Sbjct: 509 RDAIGRTWQMSTVQLDFNLPERFELEYTASDGTKQRPIMIHRALFGSIERFFGVLLEHYA 568

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P WL+P Q +   +      + + IA  L+   +  + D  ++ +  KIR H+  K+
Sbjct: 569 GAFPAWLAPHQVVGIPVADEFSPHLEAIAAKLRKRGIRADVDTSDDRMQKKIRNHTTGKV 628

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           P +++ G+++    ++  R    +    V + +AI ++ 
Sbjct: 629 PFMLLAGERDVDANAVSFRFLDGSQVNGVPVDEAIELIA 667


>gi|291277001|ref|YP_003516773.1| threonyl-tRNA synthetase [Helicobacter mustelae 12198]
 gi|290964195|emb|CBG40041.1| threonyl-tRNA synthetase [Helicobacter mustelae 12198]
          Length = 603

 Score =  526 bits (1355), Expect = e-147,   Method: Composition-based stats.
 Identities = 229/587 (39%), Positives = 357/587 (60%), Gaps = 19/587 (3%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           +EI+      SL++IRHSCAH+MA+A++ ++P+ +  +GP++++GFYYDF      S ++
Sbjct: 27  VEILFDNSQDSLSIIRHSCAHLMAQAIKELYPDAKFFVGPVVDEGFYYDFKTAHKISQED 86

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           LA+IEK+M+EI  R  P +K  ++ ++A E  + + +  K  ++  IP  +   +Y QG+
Sbjct: 87  LAKIEKQMKEIAKRKLPIIKSTMTRQEALE--KFQDDELKQAVMSKIPGDD-FGVYAQGD 143

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + DLCRGPH+ +T  +  F KL K+AGAY  GD +  ML+RIYG A+  ++ L  YL+ +
Sbjct: 144 FEDLCRGPHLPNTKFLHAF-KLTKLAGAYLGGDESAEMLTRIYGIAFADKEMLNAYLHQI 202

Query: 239 EESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINT 296
           EE++KRDHRKL  EM LF   E+   G+  W   G ++ + +   + +  +  DYE +  
Sbjct: 203 EEAKKRDHRKLGVEMGLFTFDEEVGAGLPIWLPNGARLRRRIEELLTKALMIRDYEPVRG 262

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P++L   +W+ SGH+D+Y  NM+       T  D   + LKPMNC GH+ V+   ++SYR
Sbjct: 263 PELLKSSVWKTSGHFDNYGENMYF------TTIDEVEYGLKPMNCVGHIKVYQSSVRSYR 316

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ELP+R  E+G V+R+E SG LHGL+RVR FTQDDAH+FC   Q+  E   I      I +
Sbjct: 317 ELPLRFYEYGIVHRHEKSGVLHGLLRVREFTQDDAHIFCRPTQIKTEVSNIIAFTDKIMQ 376

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
            FGF   M +L+TRP+K +G DA+W+ A   +   L       ++ I+  +  G GAFYG
Sbjct: 377 AFGFCYEM-ELATRPQKSIGQDAVWEVATQALIDALQ------ENHIHYKIDEGGGAFYG 429

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK +  + DAIGR WQCGTIQ+D NLP RF   Y++ ++    PVMIHRA+ GS ERF  
Sbjct: 430 PKIDIKITDAIGRKWQCGTIQIDMNLPERFALEYIDENNTAQQPVMIHRAILGSFERFSA 489

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           I+ E+F G  P +++P+Q ++  IT S  +YAQ +   + +     E   +NET+N KIR
Sbjct: 490 ILTEHFGGEFPFFIAPVQVVLIPITESQHQYAQSLRKKIIALGAYAEVMNKNETLNKKIR 549

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
               + +P+I++ G KE +  ++ IR     +  ++   + + ++ +
Sbjct: 550 NAEKQHVPMILVIGQKEQNSGTLAIRDRREKSQYEMKEEEFLHMVEQ 596


>gi|221480967|gb|EEE19381.1| threonyl-tRNA synthetase, putative [Toxoplasma gondii GT1]
 gi|221501688|gb|EEE27452.1| threonyl-tRNA synthetase, putative [Toxoplasma gondii VEG]
          Length = 844

 Score =  526 bits (1355), Expect = e-147,   Method: Composition-based stats.
 Identities = 238/728 (32%), Positives = 366/728 (50%), Gaps = 101/728 (13%)

Query: 4   DIKLTFPDGSIKNFPV-HATGSDVAESISRSLAKKAVAVAI------------------- 43
           +I +  PDGS K+      +  DVA  IS+ LA+ ++   +                   
Sbjct: 118 EISIELPDGSKKSGTAFETSPYDVALQISKGLAEASLVAKVLYEQPSAESEAITAADDEE 177

Query: 44  -------NGK-----------VCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAEA 84
                   G+           + D+  P+     ++++  +   +  V  HS AHI+ +A
Sbjct: 178 EEEAECPCGEHAEESPAEKWILYDMKRPLEGSCRLQLLKFDSDEAKHVFWHSSAHILGQA 237

Query: 85  VQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSH 143
           +++ +   Q+ +GP + +GFYYD +  +   + +   ++E     +I  D  F +   S 
Sbjct: 238 IEATF-GAQLTVGPALTNGFYYDAYMGDAKVTEESYGRLEAAAAAVIKEDQAFRRLVCSK 296

Query: 144 EKARELFESKKEAYKVEILES-IPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMK 202
            +A EL       +KV+++ S IP     T+Y  G   DLCRGPH+ STG+VK F    K
Sbjct: 297 AEALEL--FADNPFKVQLIASKIPEHGLTTVYCCGSLVDLCRGPHIPSTGKVKAFQVT-K 353

Query: 203 VAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDG 262
            + +YW G  +   L R+YG ++  ++ L  YL  LEE++KRDHR L + + LF    + 
Sbjct: 354 HSASYWLGRQHLDSLQRVYGVSFPDKKLLKDYLKLLEEAKKRDHRVLGQNLHLFFFDTNV 413

Query: 263 SG-VIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           S    FW   G K++  L  +MR + +   ++E+ +P +    LW+ SGH+ +Y+ NM+ 
Sbjct: 414 SPGSCFWLPDGAKVYNKLCMFMREEYRFRGFQEVISPNIFSCDLWKVSGHYQNYKENMYL 473

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
                    + + + LKPMNCPGH  +F H   SYR+LP+RLA+FG ++RNE SGSL GL
Sbjct: 474 FDV------EGKEWGLKPMNCPGHCIMFKHLAPSYRQLPLRLADFGVLHRNELSGSLTGL 527

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            RVR F QDDAH+FC  +Q+  E     N +  +Y  FGF    + LSTRP+K +G  A+
Sbjct: 528 TRVRRFQQDDAHIFCRLDQVKEEVADALNFLFFVYDQFGF-SFELFLSTRPKKALGERAV 586

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDF 500
           WD AE  +K  L+      Q      +  G+GAFYGPK +  L DA+ R  QCGTIQ+DF
Sbjct: 587 WDSAEAALKAALEETGRPWQ------LNPGDGAFYGPKIDIRLWDALKRPHQCGTIQLDF 640

Query: 501 NLPSRFNAFYVNSH----------------SEKC------------------------HP 520
            LP RFN  Y                     EK                          P
Sbjct: 641 QLPIRFNLQYRTQDEAVAGARDKAKEDKETGEKRTDSEHEQKEEEAFGVELPLRPGMARP 700

Query: 521 VMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHL 580
           V+IHRA+ GSIER   ++IE+  G LP WLSP Q IV  I+    +YA  + ++L S   
Sbjct: 701 VIIHRAILGSIERMCAVVIEHTGGKLPFWLSPKQCIVLPISDKVNDYAASVRDVLHSCGY 760

Query: 581 SIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV-SLLDAIP 639
            +  D  N T+N KIRE  +++   +++ G+KE +++++ +R       QKV S+ D + 
Sbjct: 761 EVGLDVSNNTVNKKIREAQLQQWNYLLVVGEKERADKTVTVRDRADPEHQKVLSMEDLLT 820

Query: 640 ILTKESLP 647
           +  K+ +P
Sbjct: 821 LFEKQGMP 828


>gi|237844903|ref|XP_002371749.1| threonyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
 gi|211969413|gb|EEB04609.1| threonyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
          Length = 844

 Score =  526 bits (1355), Expect = e-147,   Method: Composition-based stats.
 Identities = 238/728 (32%), Positives = 367/728 (50%), Gaps = 101/728 (13%)

Query: 4   DIKLTFPDGSIKNFPV-HATGSDVAESISRSLAKKAVAVAI------------------- 43
           +I +  PDGS K+      +  DVA  IS+ LA+ ++   +                   
Sbjct: 118 EISIELPDGSKKSGTAFETSPYDVALQISKGLAEASLVAKVLYEQPSAESEAITAADDEE 177

Query: 44  -------NGK-----------VCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAEA 84
                   G+           + D+  P+     ++++  +   +  V  HS AHI+ +A
Sbjct: 178 EEEAECPCGEHAEESPAEKWILYDMKRPLEGSCRLQLLKFDSDEAKHVFWHSSAHILGQA 237

Query: 85  VQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSH 143
           +++ +   Q+ +GP + +GFYYD +  +   + +   ++E     +I  D  F +   S 
Sbjct: 238 IEATF-GAQLTVGPALTNGFYYDAYMGDAKVTEESYGRLEAAAAAVIKEDQAFRRLVCSK 296

Query: 144 EKARELFESKKEAYKVEILES-IPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMK 202
            +A EL       +KV+++ S IP     T+Y  G   DLCRGPH+ STG+VK F  + K
Sbjct: 297 AEALEL--FADNPFKVQLIASKIPEHGLTTVYCCGSLVDLCRGPHIPSTGKVKAFQVI-K 353

Query: 203 VAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDG 262
            + +YW G  +   L R+YG ++  ++ L  YL  LEE++KRDHR L + + LF    + 
Sbjct: 354 HSASYWLGRQHLDSLQRVYGVSFPDKKLLKDYLKLLEEAKKRDHRVLGQNLHLFFFDTNV 413

Query: 263 SG-VIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           S    FW   G K++  L  +MR + +   ++E+ +P +    LW+ SGH+ +Y+ NM+ 
Sbjct: 414 SPGSCFWLPDGAKVYNKLCMFMREEYRFRGFQEVISPNIFSCDLWKVSGHYQNYKENMYL 473

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
                    + + + LKPMNCPGH  +F H   SYR+LP+RLA+FG ++RNE SGSL GL
Sbjct: 474 FDV------EGKEWGLKPMNCPGHCIMFKHLAPSYRQLPLRLADFGVLHRNELSGSLTGL 527

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            RVR F QDDAH+FC  +Q+  E     N +  +Y  FGF    + LSTRP+K +G  A+
Sbjct: 528 TRVRRFQQDDAHIFCRLDQVKEEVADALNFLFFVYDQFGF-SFELFLSTRPKKALGERAV 586

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDF 500
           WD AE  +K  L+      Q      +  G+GAFYGPK +  L DA+ R  QCGTIQ+DF
Sbjct: 587 WDSAEAALKAALEETGRPWQ------LNPGDGAFYGPKIDIRLWDALKRPHQCGTIQLDF 640

Query: 501 NLPSRFNAFYVNSH----------------SEKC------------------------HP 520
            LP RFN  Y                     EK                          P
Sbjct: 641 QLPIRFNLQYRTQDEAVAGARDKAKEDKETGEKRTDSEHEQKEEEAFGVELPLRPGMARP 700

Query: 521 VMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHL 580
           V+IHRA+ GSIER   ++IE+  G LP WLSP Q IV  I+    +YA  + ++L S   
Sbjct: 701 VIIHRAILGSIERMCAVVIEHTGGKLPFWLSPKQCIVLPISDKVNDYAASVRDVLHSCGY 760

Query: 581 SIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV-SLLDAIP 639
            +  D  N T+N KIRE  +++   +++ G+KE +++++ +R       QKV S+ D + 
Sbjct: 761 EVGLDVSNNTVNKKIREAQLQQWNYLLVVGEKERADKTVTVRDRADPEHQKVLSMEDLLT 820

Query: 640 ILTKESLP 647
           +  K+ +P
Sbjct: 821 LFEKQGMP 828


>gi|197097988|ref|NP_001125825.1| threonyl-tRNA synthetase, cytoplasmic [Pongo abelii]
 gi|55729334|emb|CAH91401.1| hypothetical protein [Pongo abelii]
          Length = 563

 Score =  526 bits (1355), Expect = e-147,   Method: Composition-based stats.
 Identities = 213/567 (37%), Positives = 320/567 (56%), Gaps = 21/567 (3%)

Query: 81  MAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQP-FSSDELAQIEKKMQEIIARDSPFLKQ 139
           M EA++ ++    +  GP IE+GFYYD   E+   SS++ + +E   ++II     F + 
Sbjct: 1   MGEAMERVYGGC-LCYGPPIENGFYYDMYLEEGGVSSNDFSSLEALCKKIIKEKQAFERL 59

Query: 140 YLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFK 199
            +  E    +F+     +K  IL         T+YR G   DLCRGPHVR TG++K   K
Sbjct: 60  EVKKETLLAMFKY--NKFKCRILNEKVNTPTTTVYRCGPLIDLCRGPHVRHTGKIK-ALK 116

Query: 200 LMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIA 259
           + K +  YW G ++   L RIYG ++   + L ++  F EE++ RDHRK+ R+ +L+   
Sbjct: 117 IHKNSSTYWEGKADMETLQRIYGISFPDPKMLKEWEKFQEEAKNRDHRKIGRDQELYFFH 176

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANM 318
           E   G  F+  KG  I+  LI ++R + +   ++E+ TP + +  LW  SGHW  Y  NM
Sbjct: 177 ELSPGSCFFLPKGAYIYNALIEFIRSEYRKRGFQEVVTPNIFNSRLWMTSGHWQHYSENM 236

Query: 319 FAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLH 378
           F+ +       +   FALKPMNCPGH  +F+H  +S+RELP+RLA+FG ++RNE SG+L 
Sbjct: 237 FSFEV------EKELFALKPMNCPGHCLMFDHRPRSWRELPLRLADFGVLHRNELSGALT 290

Query: 379 GLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD 438
           GL RVR F QDDAH+FC  EQ+ +E     + + ++Y  FGF   +  LSTRPEK +G  
Sbjct: 291 GLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSVFGFSFKLN-LSTRPEKFLGDI 349

Query: 439 ALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
            +WD AE  ++  L+      +      +  G+GAFYGPK +  +KDAIGR  QC TIQ+
Sbjct: 350 EVWDQAEKQLENSLNEFGEKWE------LNSGDGAFYGPKIDIQIKDAIGRYHQCATIQL 403

Query: 499 DFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIV 557
           DF LP RFN  YV+    +K  PV++HRA+ GS+ER I I+ EN+ G  P WLSP Q +V
Sbjct: 404 DFQLPIRFNLTYVSHDGDDKKRPVIVHRAILGSVERMIAILTENYGGKWPFWLSPRQVMV 463

Query: 558 TTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASE 616
             +  +  EYAQ++           + D     T+N KIR   + +  +I++ G+KE   
Sbjct: 464 VPVGPTCDEYAQKVRQQFHDAKFMADIDLDPGCTLNKKIRNAQLAQYNLILVVGEKEKIS 523

Query: 617 RSIGIRRFGSTTTQKVSLLDAIPILTK 643
            ++ IR   +    + ++ + I  L +
Sbjct: 524 GTVNIRTRDNKVHGERTISETIERLQQ 550


>gi|73919784|sp|Q8FPJ3|SYT_COREF RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
          Length = 694

 Score =  526 bits (1354), Expect = e-147,   Method: Composition-based stats.
 Identities = 233/660 (35%), Positives = 357/660 (54%), Gaps = 41/660 (6%)

Query: 16  NFPVHATGSDVAESIS-RSLAKKAVAVAIN--GKVCDLSD-PVREGSIEIITPEDPRSLA 71
             P           ++  +    A+  A +  G++ DLS  P    +   +        A
Sbjct: 23  EVPAGIAIGQAMRELNLPNKGDDAIVCAKDTEGQLKDLSHVPEETATFTAVPANSEDGRA 82

Query: 72  VIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIA 131
           VIRHSCAH++A+AVQ+ +P  ++ IGP IE+GFYYDFD  +PF+ ++L  IEK+M++II 
Sbjct: 83  VIRHSCAHVLAQAVQAEFPGTKLGIGPAIENGFYYDFDVAEPFTPEDLKTIEKRMKKIIK 142

Query: 132 RDSPFLKQYLSHEKARELFESKKEAYKVEILESI----PAKENVTLYRQGE--------- 178
               F ++ +         E   E YK+E+++      P  +  T    GE         
Sbjct: 143 TGQKFERR-VYESTEAAAAELADEPYKLELIQDKGNVDPDSDEATEVGAGELTAYDNVNP 201

Query: 179 ------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELT 232
                 W DLCRGPH+ +T  +  F        AYWRGD     L RIYGTAW ++++L 
Sbjct: 202 RTNEVEWSDLCRGPHIPTTRYIPAFALTRSS-AAYWRGDQTNAGLQRIYGTAWESKEKLD 260

Query: 233 QYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDD 290
           +Y   L E+EKRDHR+L  E+DLF   ++ GSG+  +H  G  +   +  + RR  I+  
Sbjct: 261 EYQTMLAEAEKRDHRRLGTELDLFSFPDEIGSGLPVFHPNGAIVRLEMEEHSRRRHIQAG 320

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD-------DTIKDLRTFALKPMNCPG 343
           Y  +NTP      L+++SGH   Y+  MF     D       +  K  + + LKPMNCP 
Sbjct: 321 YSFVNTPHATKSDLFEKSGHLGFYKEGMFPPLQLDAEYDAEGNQTKPGQDYYLKPMNCPM 380

Query: 344 HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE 403
           H  +F+   +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDDAH++CT++Q+  E
Sbjct: 381 HNLIFDSRGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYCTEDQLEEE 440

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDTIKNSSQDR 462
              +   IIS+ KD+G +   ++LST+  K  VG D +W+ +  I++ V      ++   
Sbjct: 441 LTSVLEFIISLLKDYGLDDFYLELSTKDPKKFVGDDEIWERSTEILQRV------ATNSG 494

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
           ++        AFYGPK     KDAIGR WQ  T+Q+DFNLP RF   Y +    K  P+M
Sbjct: 495 LDLVPDPEGAAFYGPKISVQAKDAIGRTWQMSTVQLDFNLPERFELEYTSPDGSKQRPIM 554

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSI 582
           IHRA+FGSIERF G+++E++ G  P WL+P Q +   +    + + +++ + L++     
Sbjct: 555 IHRALFGSIERFFGVLLEHYAGAFPAWLAPHQVVGIPVAEDFIPHLEKVVDKLRARGFRA 614

Query: 583 ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           E D  ++ +  KIR H+  KIP +++ G ++    ++  R    T    V + +A+ +++
Sbjct: 615 EVDTSDDRMQKKIRTHTTGKIPFMLLAGGRDVEADAVSFRFLDGTQVNGVPVDEAVELIS 674


>gi|300858607|ref|YP_003783590.1| threonyl-tRNA synthetase [Corynebacterium pseudotuberculosis FRC41]
 gi|300686061|gb|ADK28983.1| Threonyl-tRNA synthetase [Corynebacterium pseudotuberculosis FRC41]
 gi|302206319|gb|ADL10661.1| Threonyl-tRNA synthetase [Corynebacterium pseudotuberculosis C231]
 gi|302330876|gb|ADL21070.1| Threonyl-tRNA synthetase [Corynebacterium pseudotuberculosis 1002]
 gi|308276561|gb|ADO26460.1| Threonyl-tRNA synthetase [Corynebacterium pseudotuberculosis I19]
          Length = 689

 Score =  526 bits (1354), Expect = e-147,   Method: Composition-based stats.
 Identities = 236/645 (36%), Positives = 358/645 (55%), Gaps = 42/645 (6%)

Query: 32  RSLAKKAVAVAIN--GKVCDLSD-PVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSI 88
            +   +A+    +  G + DLS  P R+  +  +         VIRHSC H++A+AVQ+ 
Sbjct: 33  PNKGPEAIVCVKDSEGTLRDLSFIPERDMQVTPVPANTEEGREVIRHSCTHVLAQAVQAE 92

Query: 89  WPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYL-SHEKAR 147
           +P  ++ IGP IE+GFYYDFD  +PF+ ++L +IEK+M++II +   F ++   S E+A 
Sbjct: 93  FPGTKLGIGPAIENGFYYDFDVAEPFTPEDLKRIEKRMKKIIKQGQKFERRTFASVEEAS 152

Query: 148 ELFESKKEAYKVEILESI----PAKENVTLYRQGE---------------WFDLCRGPHV 188
           E  +   E YK+E++       P  +  T    G+               W+DLCRGPHV
Sbjct: 153 EALK--NEPYKLELIRDKGNVDPDSDEATEVGAGDLTGYYNLNPRTGEVDWYDLCRGPHV 210

Query: 189 RSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRK 248
            +T  +  F        AYWRGD +   L RIYGTAW +++ L +Y   + E+EKRDHR+
Sbjct: 211 PTTKYIPAFSLTRSS-AAYWRGDQSLADLQRIYGTAWESKEALEEYQTMMAEAEKRDHRR 269

Query: 249 LAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQ 306
           L  E+DLF   ++ GSG   +H  G  +   +  + RR  I   Y  +NTP +    L++
Sbjct: 270 LGAELDLFSFPDEIGSGFPVFHPNGGVVRLEMEEHSRRRHIAAGYSFVNTPHITKGDLFK 329

Query: 307 QSGHWDSYRANMFAVKCADDTIKDL-------RTFALKPMNCPGHVAVFNHGLKSYRELP 359
           +SGH D Y   MF     D  I +        + +  KPMNCP H  +F    +SYRELP
Sbjct: 330 KSGHLDFYADGMFPPMQLDGEIDEDGNVTKQAQDYYAKPMNCPMHNLIFASRGRSYRELP 389

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +RL EFG+VYR E SG +HGL R RGFTQDDAH++CT++Q+  E   + + IIS+ KD+G
Sbjct: 390 LRLFEFGTVYRYEKSGVIHGLTRARGFTQDDAHIYCTEDQLEAELTSVLDFIISLLKDYG 449

Query: 420 FEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
            +   ++LST+     VGSD +WD + +I++ V      ++Q  +         AFYGPK
Sbjct: 450 LDDFYLELSTKDPNKFVGSDEIWDLSTSILERV------ATQSGLELVPDPAGAAFYGPK 503

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
                +DAIGR WQ  T+Q+DFNLP RFN  Y      K  P+MIHRA+FGSIERF G++
Sbjct: 504 ISVQARDAIGRTWQMSTVQLDFNLPERFNLEYTAPDGSKRRPIMIHRALFGSIERFFGVL 563

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           +E++ G  P WL+P Q I   +  + V++ +E+   L+   +  + D  ++ +  KIR H
Sbjct: 564 LEHYAGAFPAWLAPHQVIGIPVADAFVDHLEEMMAQLRQRGIRADVDTSDDRMQKKIRNH 623

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  K+P +++ G ++    ++  R    T    V +  A+ I+ +
Sbjct: 624 TTGKVPFMVLAGARDVEAGAVSFRFLDGTQVNGVPVEKAVEIIDQ 668


>gi|259507396|ref|ZP_05750296.1| threonine--tRNA ligase [Corynebacterium efficiens YS-314]
 gi|259165021|gb|EEW49575.1| threonine--tRNA ligase [Corynebacterium efficiens YS-314]
          Length = 699

 Score =  526 bits (1354), Expect = e-147,   Method: Composition-based stats.
 Identities = 233/660 (35%), Positives = 357/660 (54%), Gaps = 41/660 (6%)

Query: 16  NFPVHATGSDVAESIS-RSLAKKAVAVAIN--GKVCDLSD-PVREGSIEIITPEDPRSLA 71
             P           ++  +    A+  A +  G++ DLS  P    +   +        A
Sbjct: 28  EVPAGIAIGQAMRELNLPNKGDDAIVCAKDTEGQLKDLSHVPEETATFTAVPANSEDGRA 87

Query: 72  VIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIA 131
           VIRHSCAH++A+AVQ+ +P  ++ IGP IE+GFYYDFD  +PF+ ++L  IEK+M++II 
Sbjct: 88  VIRHSCAHVLAQAVQAEFPGTKLGIGPAIENGFYYDFDVAEPFTPEDLKTIEKRMKKIIK 147

Query: 132 RDSPFLKQYLSHEKARELFESKKEAYKVEILESI----PAKENVTLYRQGE--------- 178
               F ++ +         E   E YK+E+++      P  +  T    GE         
Sbjct: 148 TGQKFERR-VYESTEAAAAELADEPYKLELIQDKGNVDPDSDEATEVGAGELTAYDNVNP 206

Query: 179 ------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELT 232
                 W DLCRGPH+ +T  +  F        AYWRGD     L RIYGTAW ++++L 
Sbjct: 207 RTNEVEWSDLCRGPHIPTTRYIPAFALTRSS-AAYWRGDQTNAGLQRIYGTAWESKEKLD 265

Query: 233 QYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDD 290
           +Y   L E+EKRDHR+L  E+DLF   ++ GSG+  +H  G  +   +  + RR  I+  
Sbjct: 266 EYQTMLAEAEKRDHRRLGTELDLFSFPDEIGSGLPVFHPNGAIVRLEMEEHSRRRHIQAG 325

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD-------DTIKDLRTFALKPMNCPG 343
           Y  +NTP      L+++SGH   Y+  MF     D       +  K  + + LKPMNCP 
Sbjct: 326 YSFVNTPHATKSDLFEKSGHLGFYKEGMFPPLQLDAEYDAEGNQTKPGQDYYLKPMNCPM 385

Query: 344 HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE 403
           H  +F+   +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDDAH++CT++Q+  E
Sbjct: 386 HNLIFDSRGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYCTEDQLEEE 445

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDTIKNSSQDR 462
              +   IIS+ KD+G +   ++LST+  K  VG D +W+ +  I++ V      ++   
Sbjct: 446 LTSVLEFIISLLKDYGLDDFYLELSTKDPKKFVGDDEIWERSTEILQRV------ATNSG 499

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
           ++        AFYGPK     KDAIGR WQ  T+Q+DFNLP RF   Y +    K  P+M
Sbjct: 500 LDLVPDPEGAAFYGPKISVQAKDAIGRTWQMSTVQLDFNLPERFELEYTSPDGSKQRPIM 559

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSI 582
           IHRA+FGSIERF G+++E++ G  P WL+P Q +   +    + + +++ + L++     
Sbjct: 560 IHRALFGSIERFFGVLLEHYAGAFPAWLAPHQVVGIPVAEDFIPHLEKVVDKLRARGFRA 619

Query: 583 ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           E D  ++ +  KIR H+  KIP +++ G ++    ++  R    T    V + +A+ +++
Sbjct: 620 EVDTSDDRMQKKIRTHTTGKIPFMLLAGGRDVEADAVSFRFLDGTQVNGVPVDEAVELIS 679


>gi|157414515|ref|YP_001481771.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81116]
 gi|172047019|sp|A8FK07|SYT_CAMJ8 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|157385479|gb|ABV51794.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81116]
 gi|307747157|gb|ADN90427.1| Threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni M1]
 gi|315932015|gb|EFV10968.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 327]
          Length = 602

 Score =  525 bits (1353), Expect = e-147,   Method: Composition-based stats.
 Identities = 244/615 (39%), Positives = 370/615 (60%), Gaps = 20/615 (3%)

Query: 34  LAKKAVAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQ 93
           + K+ +A   N  + D          EI       SL VIRHSCAH+MA+A+++++PE +
Sbjct: 1   MEKEVIAYLDNETIIDSQSVKNTNLKEIYFDNSKESLEVIRHSCAHLMAQAIKNLYPEAK 60

Query: 94  VAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESK 153
             +GP+IEDGFYYDF  E     ++L +IEKKM+E+        K  ++  +A    + +
Sbjct: 61  FFVGPVIEDGFYYDFRVESKIGEEDLVKIEKKMKELAEAKIEISKYEITKNEALA--KFQ 118

Query: 154 KEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSN 213
            +  K E+L  IP    V++Y+QGE+ DLCRGPHV +T  ++ FFKL +VAGAY  GD  
Sbjct: 119 NDDLKQEVLLRIPDGA-VSIYKQGEFEDLCRGPHVPNTKFLR-FFKLTRVAGAYLGGDEK 176

Query: 214 RPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKG 272
           R ML+RIYGTA+  ++ L +YL  +EE++KRDHRKL  E+ LF   ++ G G+  W   G
Sbjct: 177 REMLTRIYGTAFADKESLKEYLTIIEEAKKRDHRKLGTELKLFTFDDEIGGGLPIWLSNG 236

Query: 273 WKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
            ++   L   + +      YE +  P++L    W+ SGH+ +Y+ NM+  +       D 
Sbjct: 237 ARLRSKLEHILYKIHRLRGYEPVRGPELLKADAWKISGHYANYKENMYFTQI------DE 290

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
           + + +KPMNC GH+ ++   ++SYR+LP++  E+G V+R+E SG LHGL RVR FTQDDA
Sbjct: 291 QEYGIKPMNCVGHIKIYQSDVRSYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFTQDDA 350

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
           H+FC   Q+  + L+I   + ++ K F F   M ++ST+PEK +G D +W+ A   +K  
Sbjct: 351 HIFCMPSQIKEQVLEILAFVDNLMKLFDFSYEM-EISTKPEKAIGDDEIWEVATKALKEA 409

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
           LD      +  +  G+  G GAFYGPK +  + DA+ R WQCGTIQVDFNLPSRF   Y 
Sbjct: 410 LD------EQGLKYGIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDFNLPSRFKLEYT 463

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
           +S +EK  PVM+HRA+ GS ERFIGI+ E+  G  P +++P    +  I  + + YA+EI
Sbjct: 464 DSDNEKKQPVMLHRAILGSFERFIGILTEHCAGEFPFFIAPTAVGIVPIGEAHIAYAKEI 523

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
              L   ++  E   +NE+++ KIR    +K+P+I++ GD E ++RS+ +R   +   + 
Sbjct: 524 QKELLELNIDSEVYEKNESLSKKIRTAEKQKLPMILVLGDDEVAKRSVALRDRRAKEQKN 583

Query: 632 VSLLDAIPILTKESL 646
           +SL + I  L KE +
Sbjct: 584 LSLDEFI-KLVKEKM 597


>gi|300781050|ref|ZP_07090904.1| threonine--tRNA ligase [Corynebacterium genitalium ATCC 33030]
 gi|300532757|gb|EFK53818.1| threonine--tRNA ligase [Corynebacterium genitalium ATCC 33030]
          Length = 701

 Score =  525 bits (1353), Expect = e-147,   Method: Composition-based stats.
 Identities = 237/662 (35%), Positives = 365/662 (55%), Gaps = 43/662 (6%)

Query: 16  NFPVHATGSDVAESIS-RSLAKKAVAVAIN--GKVCDLSD-PVREGSIEIITPEDPRSLA 71
             P           ++  +  + A+ V  +  G + DLS  P    +   +        +
Sbjct: 29  EVPAGTPVGAAMRELNLPNKGEDAIVVVQDEEGTLKDLSHVPEETATFMPVAANTELGRS 88

Query: 72  VIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIA 131
           VIRHSCAH++A+AVQ  +P+ ++ IGP I DGFYYDFD ++PF+ ++L  +EK+M++II 
Sbjct: 89  VIRHSCAHVLAQAVQEEFPDAKLGIGPAINDGFYYDFDVKEPFTPEDLKTLEKRMKKIIK 148

Query: 132 RDSPFLK-QYLSHEKARELFESKKEAYKVEILESI----PAKENVTLYRQGE-------- 178
           +   F++  Y S E+A E  +   E YK+E+++      P  +  T    G+        
Sbjct: 149 QGQKFVRGVYASTEEAAEDLK--NEPYKLELIQDKGSVDPNSDEATEVGAGDLTHYDNVN 206

Query: 179 -------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQEL 231
                  W DLCRGPHV +T  +  F        AYWRGD +   L RIYGTAW T+++L
Sbjct: 207 PRTDEVVWHDLCRGPHVPTTKYIPAFALTRSS-AAYWRGDQSNAGLQRIYGTAWETKEKL 265

Query: 232 TQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKD 289
            +Y + LEE+EKRDHR+L  EMDLF   ++ GSG+  +H  G  +   + ++ R R ++ 
Sbjct: 266 EEYQHMLEEAEKRDHRRLGAEMDLFSFPDEVGSGLPVFHPDGGIVRMEMENHSRKRHLEA 325

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL-------RTFALKPMNCP 342
            Y  +NTP V    L+QQSGH D Y   MF     D    +          +  KPMNCP
Sbjct: 326 GYSFVNTPHVTKGDLFQQSGHLDWYADGMFPPMQLDGEWDEDGNCVKQPVDYYAKPMNCP 385

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN 402
            H  +F+   +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDDAH++CT++Q+  
Sbjct: 386 FHNLIFDSRGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYCTEDQLEQ 445

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDTIKNSSQD 461
           E   +   IIS+ +D+G +   ++LST+  +  +G D +W+ + NI++ V      +++ 
Sbjct: 446 ELTDVLEFIISLLQDYGLDDFYLELSTKDPEKYIGDDDIWERSTNILESV------ATRS 499

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
            +         AFYGPK     +DAIGR WQ  T+Q+DFNLP RFN  Y +S   K  PV
Sbjct: 500 GLELVPDPAGAAFYGPKISVQARDAIGRTWQMSTVQLDFNLPDRFNLEYTSSDGTKQRPV 559

Query: 522 MIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLS 581
           MIHRA+FGSIERF G+++E++ G  P WL+P Q +   +      +   + + L+   + 
Sbjct: 560 MIHRALFGSIERFFGVLLEHYAGAFPAWLAPRQVVGIPVADEFAPHLDAVTDKLRKRGIR 619

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
              D  ++ +  KIR H+  K+P +++ G ++    ++  R    +    V + +AI ++
Sbjct: 620 ASVDHSDDRMQKKIRNHTTGKVPFMLLAGARDVEADAVSFRFLDGSQVNGVPVDEAIELI 679

Query: 642 TK 643
           ++
Sbjct: 680 SQ 681


>gi|290980243|ref|XP_002672842.1| predicted protein [Naegleria gruberi]
 gi|284086421|gb|EFC40098.1| predicted protein [Naegleria gruberi]
          Length = 720

 Score =  525 bits (1352), Expect = e-147,   Method: Composition-based stats.
 Identities = 225/653 (34%), Positives = 367/653 (56%), Gaps = 47/653 (7%)

Query: 22  TGSDVA-ESISRSLAKKAVAVAINGKVCDLSDPVRE---------GSIEIITPEDPRSLA 71
           T   +A E   ++   + +   INGK+ D++D   E          +IE  T E      
Sbjct: 72  TPLQLANEVFYKNEVSEFLVCKINGKLTDMNDTFSEILNNQESNNNNIEFFTFESVEGKE 131

Query: 72  VIRHSCAHIMAEAVQSIWPEV-QVAIGPII---------EDGFYYD--FDKEQPFSSDEL 119
           V  HS AHI+  A++  +    ++  GP +           GF+Y+   +  +  ++++L
Sbjct: 132 VFWHSTAHILGCALEQKFGSSLKLCDGPPLVSKEASQVLNGGFFYEGFLENNERITTEQL 191

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            ++EK MQ+++     F K +++ E ARE+F+  +  +K++I+E IP+ E +T+Y+ G  
Sbjct: 192 EELEKFMQQVVKEKHSFQKIHITKELAREIFKYNQ--FKLDIIEKIPSGEPITMYKCGNL 249

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPH+ +T  +K   KL K++GAYW+GD   P+L R+YG ++   ++L  +   +E
Sbjct: 250 VDLCRGPHIPNTSMIK-AVKLTKLSGAYWKGDEKSPLLQRVYGISFPKAKQLEDWQTLIE 308

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+ KRDHR +A++ DLF   E   G  F+   G ++F  L+ ++R++ +   Y+E+ TPQ
Sbjct: 309 EALKRDHRLIAKKQDLFFFHEYSPGTPFFLPHGTRLFNKLVEFIRKEYRKRGYDEVITPQ 368

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +  + LW+ SGHW  Y+ +MF V   + T     T  +KPMNCP H  +F+  ++SYREL
Sbjct: 369 MFQKELWETSGHWQHYKDDMFTV--IEGTQHKEETIGIKPMNCPAHCLMFDSKIRSYREL 426

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           PVRLA+F  ++RNEP GSL GL RVR F QDD+H+FCT +Q+ +E       +  +Y + 
Sbjct: 427 PVRLADFSPLHRNEPRGSLTGLTRVRRFHQDDSHIFCTHDQVKSEIENCLQFVKFVYSEI 486

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
               +   LSTRPEK VG   +WD AE  +K  LD          N  +  G+GAFYGPK
Sbjct: 487 FGFNLRFNLSTRPEKFVGDIEMWDKAEQSLKECLD--------GYNWKLNEGDGAFYGPK 538

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +  ++D++ R  QC TIQ+DF LP RFN  Y + + +   PV+IHRA+ GSIERFI ++
Sbjct: 539 IDIQIEDSLQRFHQCATIQLDFQLPRRFNLKYQSQNDQLITPVIIHRAILGSIERFIALL 598

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSA---VEYAQEIANL-LKSHHLS-------IETDFR 587
            E+  G  P WL+P Q  +  +++     V+Y +E+ +   K+           I+ D  
Sbjct: 599 TEHLSGRWPFWLNPRQCFICPVSAENASLVDYCKEVKDQIFKTAEERGVFSNYFIDVDLS 658

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
           ++T+  KIR+  + +   I++ G+KE  E+++ +R+   T    + +   + +
Sbjct: 659 DKTMKKKIRDAQVLQYNFILVLGEKEMQEKTVSVRKRDGTLVGTMKIDALLSM 711


>gi|32265941|ref|NP_859973.1| threonyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449]
 gi|73919797|sp|Q7VJ09|SYT_HELHP RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|32261990|gb|AAP77039.1| threonyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449]
          Length = 604

 Score =  525 bits (1352), Expect = e-147,   Method: Composition-based stats.
 Identities = 240/613 (39%), Positives = 367/613 (59%), Gaps = 26/613 (4%)

Query: 37  KAVAVAINGKVCDLSDP----VREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEV 92
           + + +  N  + DL       +   SI         SLA+IRHSCAH+MA+A++ ++PE 
Sbjct: 3   EVIGIKHNQHIYDLCTADELGITGDSISF--DNSQESLAIIRHSCAHLMAQAIKILYPEA 60

Query: 93  QVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFES 152
           Q  +GP++++GFYYDF      S ++L  IE KM+EI     P  K  LS ++A+     
Sbjct: 61  QFFVGPVVDEGFYYDFKVNTKISEEDLLVIEAKMKEIAKNAYPITKITLSRKEAQAR--F 118

Query: 153 KKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDS 212
             +  KV ++  IP  E +++Y QG++ DLCRGPH+ +T  ++ F KL K+AGAY  GD 
Sbjct: 119 AHDELKVAVMSRIP-DEKLSIYTQGDFEDLCRGPHLPNTKLLEHF-KLTKIAGAYLGGDE 176

Query: 213 NRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRK 271
           N  ML RIYG A+  +Q L  YL+ LEE++KRDHRKL +EM LF   E+ G+G+  W  K
Sbjct: 177 NAQMLIRIYGIAFADKQSLKDYLFTLEEAKKRDHRKLGQEMGLFTFDEEIGAGLPIWLPK 236

Query: 272 GWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G ++   +   + + +K+  YE +  P++L   +W++SGH+ +Y+ NM+       TI D
Sbjct: 237 GARLRHNIEHLLTQALKERGYEPVRGPEILKSDVWKKSGHYSNYKENMYF------TIID 290

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
            + + +KPMNC GH+ V+    +SYRELP+R  E+G V+R+E SG LHGL+RVR FTQDD
Sbjct: 291 EQEYGIKPMNCVGHIKVYQSSPRSYRELPLRFYEYGIVHRHERSGVLHGLLRVREFTQDD 350

Query: 391 AHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKG 450
           AH+FC   Q+ +E  +I +    I   FGF   M +LSTRP+K +G+D +W++A   +K 
Sbjct: 351 AHIFCMTSQIKSEVNQILDFTKGIMNAFGFHYEM-ELSTRPQKSIGNDEVWENATAALKS 409

Query: 451 VLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFY 510
            L+      ++ I+  +  G GAFYGPK +  + DA+ R WQCGTIQ+D NLP RF   Y
Sbjct: 410 ALE------ENHISYQIDEGGGAFYGPKIDIKITDALKRKWQCGTIQIDMNLPERFELSY 463

Query: 511 VNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQE 570
            + H+ +  PVMIHRA+ GS ERF+ I+ E+F G  PL+++P Q I+  I  + +EYA+ 
Sbjct: 464 TDEHNVQVQPVMIHRAILGSFERFVAILTEHFGGEFPLFIAPTQVILIPIGEAQLEYARI 523

Query: 571 IANL-LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           + +  +       E   +NE+++ KIR    +++P+I++ G KE   + + IR     + 
Sbjct: 524 LRDKIITQSGAYAELMDKNESLSKKIRLAEKQRVPLIVVIGAKEVESKILAIRDRREKSQ 583

Query: 630 QKVSLLDAIPILT 642
            ++     I  L 
Sbjct: 584 YELPEEAFIATLK 596


>gi|311739567|ref|ZP_07713402.1| threonine--tRNA ligase [Corynebacterium pseudogenitalium ATCC
           33035]
 gi|311305383|gb|EFQ81451.1| threonine--tRNA ligase [Corynebacterium pseudogenitalium ATCC
           33035]
          Length = 687

 Score =  525 bits (1352), Expect = e-146,   Method: Composition-based stats.
 Identities = 228/629 (36%), Positives = 352/629 (55%), Gaps = 38/629 (6%)

Query: 44  NGKVCDLS-DPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIED 102
           +G + DLS  P  E +   +   +    AVIRHSC H+MA+AVQ+ +P  ++ IGP IE+
Sbjct: 47  DGTLFDLSHTPDTESTFTPVAASEEDGRAVIRHSCGHVMAQAVQAEFPGTKLGIGPAIEN 106

Query: 103 GFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL 162
           GFY+DF   +PF+ ++L  IEK+M++II     F + ++            +E +K+E++
Sbjct: 107 GFYFDFQTAEPFTPEDLKAIEKRMKKIIKGGQRFER-HVYESAEEAEKALAEEPFKLELV 165

Query: 163 ESI----PAKENVTLYRQGE---------------WFDLCRGPHVRSTGQVKKFFKLMKV 203
           +      P  +       G+               WFDLCRGPHV +T  +  F      
Sbjct: 166 QDKGNVDPDSDEAAEVGSGDLTHYDNINPRTGEVEWFDLCRGPHVPTTKYIPAFTLTRSS 225

Query: 204 AGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-G 262
             AYWRGD ++  L RIYGTA+ +++ L  Y   +EE+EKRDHR+L +E+DLF   ++ G
Sbjct: 226 -AAYWRGDQSKAGLQRIYGTAFESKEALEAYQTMVEEAEKRDHRRLGQELDLFSFPDEIG 284

Query: 263 SGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG   +H  G  +   + ++ R R ++  Y  +NTP +    L+++SGH D Y   MF  
Sbjct: 285 SGFPVFHPNGATVRMEMENHSRNRHVQAGYSFVNTPHITKGDLFKKSGHLDFYADGMFPP 344

Query: 322 KCAD-------DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
              D       +T+K+ + +  KPMNCP H  +F    +SYRELP+RL EFG+VYR E S
Sbjct: 345 MQLDGEYDEEGNTVKEPQDYYAKPMNCPMHNLIFASRGRSYRELPLRLFEFGTVYRYEKS 404

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK- 433
           G +HGL R RGFTQDDAH++CT+EQ+  E  K+ + IIS+ KD+G     ++LST+    
Sbjct: 405 GVVHGLTRARGFTQDDAHIYCTEEQLEEELTKVLDFIISLLKDYGLSDFYLELSTKDPNK 464

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
            VGSD +W+ + +I++ V +      +  +         AFYGPK     +DAIGR WQ 
Sbjct: 465 FVGSDEIWERSTSILQSVAE------KSGLELVPDPAGAAFYGPKISVQARDAIGRTWQM 518

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI 553
            T+Q+DFNLP RF   Y  S   K  P+MIHRA+FGSIERF G+++E++ G  P WL+P 
Sbjct: 519 STVQLDFNLPERFELEYTASDGTKKRPIMIHRALFGSIERFFGVLLEHYAGAFPAWLAPH 578

Query: 554 QAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
           Q +   +      + +E+A  L+   +  + D  ++ +  KIR H+  K+P +++ G ++
Sbjct: 579 QVVGIPVADEFSPHLEEVAAQLRQKGIRADVDTSDDRMQKKIRNHTTGKVPFMLVAGARD 638

Query: 614 ASERSIGIRRFGSTTTQKVSLLDAIPILT 642
               ++  R    T    V + +A+ ++ 
Sbjct: 639 VEADAVSFRFLDGTQVNGVPVKEAVELIA 667


>gi|157736342|ref|YP_001489025.1| threonyl-tRNA synthetase [Arcobacter butzleri RM4018]
 gi|157698196|gb|ABV66356.1| threonyl-tRNA synthetase [Arcobacter butzleri RM4018]
          Length = 602

 Score =  525 bits (1352), Expect = e-146,   Method: Composition-based stats.
 Identities = 239/609 (39%), Positives = 370/609 (60%), Gaps = 21/609 (3%)

Query: 39  VAVAINGKVCDLSDP--VREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAI 96
           + +  +G++ DL     +     EI + +   SL ++RHSCAH+MA+A++ ++PE +  +
Sbjct: 4   IGILKDGQIYDLQTAEALNIQGDEIKSDDSKESLDILRHSCAHLMAQAIKELYPEAKFFV 63

Query: 97  GPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEA 156
           GP++++GFYYDF      S DEL  IEKKM+EI  R  P  +   + E+  E  + K + 
Sbjct: 64  GPVVKEGFYYDFKVNSKISDDELPTIEKKMKEIADRKLPITRHETTKEEFYE--KFKNDE 121

Query: 157 YKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPM 216
            K  +L++I   + +T+YRQG++ DLCRGPH+ +T  ++ F KL +VAGAY  GD    M
Sbjct: 122 LKQAVLKNIK-DDVLTIYRQGDFEDLCRGPHLPNTRMIRSF-KLTRVAGAYLGGDEKNEM 179

Query: 217 LSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKI 275
           ++RIYG A+  +Q L  Y   LEE++KRDHRKL  E++LF   +D   G+  W  KG ++
Sbjct: 180 ITRIYGIAFFDKQALFDYTRMLEEAKKRDHRKLGTELELFTFNDDVGAGLPMWLPKGARL 239

Query: 276 FQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
              L   + +      YE +  P++L   +W+ SGH+ +Y+ NM+       T  D + +
Sbjct: 240 RSKLEHLLYKAHRIRGYEPVRGPEILKAEMWKISGHYANYKENMYF------TTIDDQEY 293

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
            +KPMNC GH+ +F + L SY+ELP +L E+G V+R+E SG++HGL RVR FTQDD+H+F
Sbjct: 294 GIKPMNCVGHIQIFKNNLVSYKELPKKLFEYGVVHRHEMSGAMHGLFRVREFTQDDSHIF 353

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDT 454
           CT++Q+     ++   + ++ K F F+  + ++ST+PEK +G D  W+     +   LD 
Sbjct: 354 CTQDQIKQVIFEVLEFVDTLLKVFDFKYEI-EVSTKPEKAIGDDIFWEKTTKGIMDALD- 411

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH 514
                ++ I+ G+  G GAFYGPK +  + DAIGR WQCGT+QVD NLPSRFN  Y+N  
Sbjct: 412 -----ENNISYGIDEGGGAFYGPKIDIKILDAIGRKWQCGTVQVDMNLPSRFNVEYINEK 466

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANL 574
            EK  PVMIHRA+ GS ERFIGI+ E+  G  P  ++P Q I+  I  S VEYA+E+   
Sbjct: 467 GEKEQPVMIHRAILGSFERFIGILTEHCAGEFPFIIAPTQVILVPIADSHVEYAKELQKA 526

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           L  + L  E    NE++N +IR    +++P+I++ GD+E   +++ +R   +     +S 
Sbjct: 527 LLENDLDSEIYNMNESLNKRIRMAEKQRVPMIVVIGDEEVENKTVALRNRRTREQSNMSK 586

Query: 635 LDAIPILTK 643
            + I +L +
Sbjct: 587 NEFISMLNE 595


>gi|161760548|ref|NP_907033.2| threonyl-tRNA synthetase [Wolinella succinogenes DSM 1740]
          Length = 602

 Score =  525 bits (1352), Expect = e-146,   Method: Composition-based stats.
 Identities = 243/614 (39%), Positives = 368/614 (59%), Gaps = 22/614 (3%)

Query: 37  KAVAVAINGKVCDLSD--PVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           K + +    ++ DL     +     EI+    P SL +IRHSCAH++A+A++S++PE Q 
Sbjct: 2   KPIGIKYQNEIYDLQTAQLLGIEGEEILFDNSPDSLHIIRHSCAHLLAQAIKSLYPEAQF 61

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            +GP++++GFYYDF  E     ++LA IEKKM+EI    S   +  LS E+A    +  K
Sbjct: 62  FVGPVVQEGFYYDFRVESKIGEEDLAIIEKKMKEIAKNGSDIERYTLSREEAIA--KFAK 119

Query: 155 EAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNR 214
           +  K  ++  IP  + +++YRQGE+ DLCRGPH+ ST  +  F KL K+AGAY  GD   
Sbjct: 120 DDLKQAVISRIPEGD-LSIYRQGEFEDLCRGPHLPSTKLLHAF-KLTKLAGAYLGGDEKS 177

Query: 215 PMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGW 273
            ML+RIYG A+  ++ L  YL+ +EE++KRDHRK+  EM LF   ED   G+  W   G 
Sbjct: 178 EMLTRIYGIAFADKESLNAYLHQMEEAKKRDHRKVGTEMGLFIFDEDVGAGLPIWLPAGA 237

Query: 274 KIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           ++ + L + +    I+ +YE +  P++L   LW+ SGH+ +Y+ NM+  K       D  
Sbjct: 238 RLRRRLEAMLTEAHIRRNYEPVRGPEILKSDLWKISGHYQNYKENMYFTKI------DEV 291

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
            + +KPMNC GH+ V+  G++SYRELP+R  E+G V+R+E SG LHGL+RVR FTQDDAH
Sbjct: 292 EYGIKPMNCVGHIKVYGSGVRSYRELPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDAH 351

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
           +FC  EQ+ +E + I + +  I   FGF   M ++STRPEK +G +A+W+     +K  L
Sbjct: 352 IFCRPEQIKDEVVDIVHFVDKIMSAFGFNYEM-EISTRPEKSIGDEAIWEKGTQALKEAL 410

Query: 453 DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
           +         +  G+  G GAFYGPK +  + DAIGR WQCGT+Q+D NLP RF   Y +
Sbjct: 411 EA------QGLQYGIDEGGGAFYGPKIDIKITDAIGRKWQCGTVQIDMNLPERFELAYTD 464

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIA 572
            ++    PVMIHRA+ GS ERF+ I+ E+F G  P +++P    +  I    +EYA+ + 
Sbjct: 465 ENNTPQRPVMIHRAILGSFERFVAILTEHFGGEFPFFIAPTPVAIVPIGEEQLEYAKHLR 524

Query: 573 NLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
             L+   +  E   +NET+N KIR    +++P+I++ G++E +E+ + IR        ++
Sbjct: 525 LELQKVGVYAEIHDKNETLNKKIRTVEKQRVPMIVVLGEREVNEKKVAIRDRREKRQYEL 584

Query: 633 SLLDAIPILTKESL 646
              + I  L KE +
Sbjct: 585 GEAEFIQ-LAKEKM 597


>gi|225155152|ref|ZP_03723647.1| threonyl-tRNA synthetase [Opitutaceae bacterium TAV2]
 gi|224804099|gb|EEG22327.1| threonyl-tRNA synthetase [Opitutaceae bacterium TAV2]
          Length = 646

 Score =  525 bits (1351), Expect = e-146,   Method: Composition-based stats.
 Identities = 232/628 (36%), Positives = 345/628 (54%), Gaps = 60/628 (9%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           L  IRHS +HI+A A+  ++PE ++ IGP  + GFYYD D +  F+ ++LA+IE +M+++
Sbjct: 6   LEEIRHSSSHILATAILRLFPEAKLDIGPPTDSGFYYDIDLDHKFTLEDLARIEAEMKKV 65

Query: 130 IARDSPFLKQYLSHEKARELFESKKEA-YKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           I  + PF +   + E+A  +   + +  YK+  L  IPA E ++ Y+ GE+ DLC G HV
Sbjct: 66  IDENQPFRRFETTREEAERIIRERGQERYKLGRLADIPAGEAISFYQNGEFIDLCAGTHV 125

Query: 189 RSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRK 248
           R T QVK F KL+ +AGAY RGD     L RIYGTA+ ++ EL Q+L   E+++ RDHRK
Sbjct: 126 RYTKQVKAF-KLLSIAGAYHRGDEKNKQLQRIYGTAFASKDELAQFLERQEQAKLRDHRK 184

Query: 249 LAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQ 306
           L R++ LFHI ED   G+I W   G  + Q L +++  +++   Y ++ TP +    L++
Sbjct: 185 LGRDLKLFHIDEDVGQGLILWTPAGSVVRQELQNFISEELRKQGYSQVFTPHIGKLALYK 244

Query: 307 QSGHWDSYRANMFAVKCADDTIKD------------------------------------ 330
            SGH+  Y+   F      D +                                      
Sbjct: 245 TSGHFPYYKDAQFPAIIEPDQLAQISAAGCSCADMTARLEAVSPAFAAQLNERTGTAMIG 304

Query: 331 -----------LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHG 379
                      L  F LKPMNCP H+ +F     SYR+LPVRLAEFG+VYR E SG L+G
Sbjct: 305 ADRINPDPTALLDGFLLKPMNCPHHIKIFASQPHSYRDLPVRLAEFGTVYRWEQSGELNG 364

Query: 380 LMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK---RVG 436
           + RVRGFTQDDAH+FCT+EQ+  E     +L+ ++    G     V++  R        G
Sbjct: 365 MTRVRGFTQDDAHLFCTEEQIAQEIQGCLSLVKTVLSTLGMADYRVRVGLRDPDSNKYTG 424

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
           +   WD AEN  +    T+       +      GE AFYGPK ++++KD IGR+WQ GT+
Sbjct: 425 AAENWDKAENACRTAAQTLG------VPFTEEPGEAAFYGPKIDFVIKDVIGREWQLGTV 478

Query: 497 QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI 556
           QVD+NLP RF+  Y+ + ++   PVMIHRA FGS+ERF G++IE+F G+ P+WL+P Q  
Sbjct: 479 QVDYNLPVRFDLSYIGADNQPHRPVMIHRAPFGSMERFCGVLIEHFAGDFPVWLAPEQVR 538

Query: 557 VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASE 616
           +  I+     Y++++ N L+   + +  D  ++ I  K+R   + KIP +I+ G KEA  
Sbjct: 539 ILPISDKVAAYSEKLYNELREAGVRVVLDSDSDKIGAKLRRAELSKIPYMIVAGQKEAEA 598

Query: 617 RSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            +I +R         +   D    L +E
Sbjct: 599 EAISVRSRAKGDEGVMPFADWKARLLEE 626


>gi|296117779|ref|ZP_06836362.1| threonine--tRNA ligase [Corynebacterium ammoniagenes DSM 20306]
 gi|295969010|gb|EFG82252.1| threonine--tRNA ligase [Corynebacterium ammoniagenes DSM 20306]
          Length = 691

 Score =  524 bits (1350), Expect = e-146,   Method: Composition-based stats.
 Identities = 236/660 (35%), Positives = 363/660 (55%), Gaps = 43/660 (6%)

Query: 18  PVHATGSDVAESIS-RSLAKKAVAVAIN--GKVCDLSD-PVREGSIEIITPEDPRSLAVI 73
           P           +   +   +AV V  +  G + DL+  P  +     +   +    AVI
Sbjct: 18  PAGTAVGAAMRELGLPNKGPEAVVVVRDTEGTLKDLAHVPTEDSVFTPVAACEEDGRAVI 77

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           RHSCAH++A+AVQ+ +P  ++ IGP IE+GFYYDF  E+PF+ ++L  IEK+M++II   
Sbjct: 78  RHSCAHVLAQAVQAEFPGTKLGIGPAIENGFYYDFQTEEPFTPEDLKVIEKRMKKIIKTG 137

Query: 134 SPFLKQYL-SHEKARELFESKKEAYKVEILESI----PAKENVTLYRQGE---------- 178
             F +    S+E+A E    + E +K+E++E      P  +  T    GE          
Sbjct: 138 QRFERGVFASNEEAAE--ALRDEPFKLELVEDKGNVDPNSDEATEVGSGELTYYDNVNPR 195

Query: 179 -----WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQ 233
                W DLCRGPH+ +T  +  F        AYWRGD N   L RIYGTAW +++ L  
Sbjct: 196 SNEVEWSDLCRGPHIPTTKYIPAFTLTRSS-AAYWRGDQNNAGLQRIYGTAWESKESLEA 254

Query: 234 YLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDY 291
           Y   +EE+EKRDHR+L  E+DLF   +D GSG+  +H  G  +   +  + RR  I+  Y
Sbjct: 255 YQMMMEEAEKRDHRRLGAELDLFSFPDDLGSGLPVFHPNGGIVRTEMEEHSRRRHIEAGY 314

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD-------DTIKDLRTFALKPMNCPGH 344
             +NTP +  Q L+++SGH   Y+  MF     D       +  K  + + LKPMNCP H
Sbjct: 315 SFVNTPHITKQDLFERSGHLGFYKDGMFPPMHVDAEYDAEGNETKPGQDYYLKPMNCPMH 374

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +F+   +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDDAH++CT++Q+  E 
Sbjct: 375 NLIFDTRGRSYRELPLRLFEFGNVYRYEKSGVIHGLTRARGFTQDDAHIYCTEDQLEEEL 434

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKR-VGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             + + IIS+ +D+G +   ++LSTR   + VGS+ +W+ +  I+  V +      +  +
Sbjct: 435 TSVLDFIISLLQDYGLDDFYLELSTRDPNKSVGSEEIWERSTAILARVAE------KSGL 488

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
                    AFYGPK     +DAIGR WQ  T+Q+DFN+P RFN  Y  S   K  P+MI
Sbjct: 489 ELVPDPEGAAFYGPKISVQARDAIGRTWQMSTVQLDFNMPERFNLEYTASDGSKKQPIMI 548

Query: 524 HRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIE 583
           HRA+FGSIERF G+++E++ G  P WL+P Q +   ++   V + +++   L    +  +
Sbjct: 549 HRALFGSIERFFGVLLEHYAGAFPAWLAPHQVVGIPVSEDNVGHLEQVIAKLCKKGIRAD 608

Query: 584 TDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            D  ++ +  KIR H+  K+P +++ G ++A   ++  R    +    + + +A+ ++  
Sbjct: 609 VDTSDDRMQKKIRNHTTGKVPFMLLAGARDAEANAVSFRFLDGSQANGIDVDEAVELIAN 668


>gi|194384006|dbj|BAG59361.1| unnamed protein product [Homo sapiens]
          Length = 602

 Score =  524 bits (1350), Expect = e-146,   Method: Composition-based stats.
 Identities = 211/564 (37%), Positives = 317/564 (56%), Gaps = 21/564 (3%)

Query: 84  AVQSIWPEVQVAIGPIIEDGFYYDFDKEQP-FSSDELAQIEKKMQEIIARDSPFLKQYLS 142
           A++ ++    +  GP IE+GFYYD   E+   SS++ + +E   ++II     F +  + 
Sbjct: 43  AMERVYGGC-LCYGPPIENGFYYDMYLEEGGVSSNDFSSLEALCKKIIKEKQAFERLEVK 101

Query: 143 HEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMK 202
            E    +F+     +K  IL         T+YR G   DLCRGPHVR TG++K   K+ K
Sbjct: 102 KETLLAMFKY--NKFKCRILNEKVNTPTTTVYRCGPLIDLCRGPHVRHTGKIK-ALKIHK 158

Query: 203 VAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDG 262
            +  YW G ++   L RIYG ++   + L ++  F EE++ RDHRK+ R+ +L+   E  
Sbjct: 159 NSSTYWEGKADMETLQRIYGISFPDPKMLKEWEKFQEEAKNRDHRKIGRDQELYFFHELS 218

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
            G  F+  KG  I+  LI ++R + +   ++E+ TP + +  LW  SGHW  Y  NMF+ 
Sbjct: 219 PGSCFFLPKGAYIYNALIEFIRSEYRKRGFQEVVTPNIFNSRLWMTSGHWQHYSENMFSF 278

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           +       +   FALKPMNCPGH  +F+H  +S+RELP+RLA+FG ++RNE SG+L GL 
Sbjct: 279 EV------EKELFALKPMNCPGHCLMFDHRPRSWRELPLRLADFGVLHRNELSGALTGLT 332

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALW 441
           RVR F QDDAH+FC  EQ+ +E     + + ++Y  FGF   +  LSTRPEK +G   +W
Sbjct: 333 RVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSVFGFSFKLN-LSTRPEKFLGDIEVW 391

Query: 442 DDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFN 501
           D AE  ++  L+      +      +  G+GAFYGPK +  +KDAIGR  QC TIQ+DF 
Sbjct: 392 DQAEKQLENSLNEFGEKWE------LNSGDGAFYGPKIDIQIKDAIGRYHQCATIQLDFQ 445

Query: 502 LPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTI 560
           LP RFN  YV+    +K  PV++HRA+ GS+ER I I+ EN+ G  P WLSP Q +V  +
Sbjct: 446 LPIRFNLTYVSHDGDDKKRPVIVHRAILGSVERMIAILTENYGGKWPFWLSPRQVMVVPV 505

Query: 561 TSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSI 619
             +  EYAQ++           + D     T+N KIR   + +   I++ G+KE    ++
Sbjct: 506 GPTCDEYAQKVRQQFHDAKFMADIDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKISGTV 565

Query: 620 GIRRFGSTTTQKVSLLDAIPILTK 643
            IR   +    + ++ + I  L +
Sbjct: 566 NIRTRDNKVHGERTISETIERLQQ 589


>gi|255325106|ref|ZP_05366212.1| threonine--tRNA ligase [Corynebacterium tuberculostearicum SK141]
 gi|255297671|gb|EET76982.1| threonine--tRNA ligase [Corynebacterium tuberculostearicum SK141]
          Length = 687

 Score =  524 bits (1350), Expect = e-146,   Method: Composition-based stats.
 Identities = 228/629 (36%), Positives = 352/629 (55%), Gaps = 38/629 (6%)

Query: 44  NGKVCDLS-DPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIED 102
           +G + DLS  P  E +   +   +    AVIRHSC H+MA+AVQ+ +P  ++ IGP IE+
Sbjct: 47  DGTLFDLSHTPDTESTFTPVAASEEDGRAVIRHSCGHVMAQAVQAEFPGTKLGIGPAIEN 106

Query: 103 GFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL 162
           GFY+DF   +PF+ ++L  IEK+M++II     F + ++            +E +K+E++
Sbjct: 107 GFYFDFQTAEPFTPEDLKAIEKRMKKIIKGGQRFER-HVYESAEEAEKALAEEPFKLELV 165

Query: 163 ESI----PAKENVTLYRQGE---------------WFDLCRGPHVRSTGQVKKFFKLMKV 203
           +      P  +       G+               WFDLCRGPHV +T  +  F      
Sbjct: 166 QDKGNVDPDSDEAAEVGSGDLTHYDNINPRTGEVEWFDLCRGPHVPTTKYIPAFTLTRSS 225

Query: 204 AGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-G 262
             AYWRGD ++  L RIYGTA+ +++ L  Y   +EE+EKRDHR+L +E+DLF   ++ G
Sbjct: 226 -AAYWRGDQSKAGLQRIYGTAFESKEALEAYQTMVEEAEKRDHRRLGQELDLFSFPDEIG 284

Query: 263 SGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG   +H  G  +   + ++ R R ++  Y  +NTP +    L+++SGH D Y   MF  
Sbjct: 285 SGFPVFHPNGATVRMEMENHSRNRHVQAGYSFVNTPHITKGDLFKKSGHLDFYADGMFPP 344

Query: 322 KCAD-------DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
              D       +T+K+ + +  KPMNCP H  +F    +SYRELP+RL EFG+VYR E S
Sbjct: 345 MQLDGEYDEEGNTVKEPQDYYAKPMNCPMHNLIFASRGRSYRELPLRLFEFGTVYRYEKS 404

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK- 433
           G +HGL R RGFTQDDAH++CT+EQ+  E  K+ + IIS+ KD+G     ++LST+    
Sbjct: 405 GVVHGLTRARGFTQDDAHIYCTEEQLEEELTKVLDFIISLLKDYGLSDFYLELSTKDPNK 464

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
            VGSD +W+ + +I++ V +      +  +         AFYGPK     +DAIGR WQ 
Sbjct: 465 FVGSDEIWERSTSILQSVAE------KSGLELVPDPAGAAFYGPKISVQARDAIGRTWQM 518

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI 553
            T+Q+DFNLP RF   Y  S   K  P+MIHRA+FGSIERF G+++E++ G  P WL+P 
Sbjct: 519 STVQLDFNLPERFELEYTASDGTKKRPIMIHRALFGSIERFFGVLLEHYAGAFPAWLAPH 578

Query: 554 QAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
           Q +   +      + +E+A  L+   +  + D  ++ +  KIR H+  K+P +++ G ++
Sbjct: 579 QVVGIPVADEFSPHLEEVATQLRQKGIRADVDTSDDRMQKKIRNHTTGKVPFMLVAGARD 638

Query: 614 ASERSIGIRRFGSTTTQKVSLLDAIPILT 642
               ++  R    T    V + +A+ ++ 
Sbjct: 639 VEADAVSFRFLDGTQVNGVPVKEAVELIA 667


>gi|284929344|ref|YP_003421866.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [cyanobacterium
           UCYN-A]
 gi|284809788|gb|ADB95485.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [cyanobacterium
           UCYN-A]
          Length = 608

 Score =  524 bits (1350), Expect = e-146,   Method: Composition-based stats.
 Identities = 241/602 (40%), Positives = 364/602 (60%), Gaps = 16/602 (2%)

Query: 50  LSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD 109
           L++   +  I+++   +   L  IRH+ +H+MA AVQ ++P+ +V IGP  E GFYYDFD
Sbjct: 7   LTEVSEQQDIKLLRTSESHKLKCIRHTASHVMAMAVQRLFPQAKVTIGPWTETGFYYDFD 66

Query: 110 KEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKE 169
             +PF   +L  I+K+M +II    P +K+ ++ E+A++     +E YK+EILE++  + 
Sbjct: 67  ISKPFLDQDLKNIKKEMIKIIKSKLPVIKEEITLEEAKKRIAQIQEPYKLEILENL--QP 124

Query: 170 NVTLYRQG-EWFDLCRGPHVRSTGQVKK-FFKLMKVAGAYWRGDSNRPMLSRIYGTAWNT 227
            +TLY  G EW+DLC GPH+ ST  +    F++  VAGAYWRGD  +  L RIYGTAW T
Sbjct: 125 PITLYHLGSEWWDLCSGPHLESTANLHPKAFEIESVAGAYWRGDETKAQLQRIYGTAWET 184

Query: 228 QQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRK 286
             +L +Y    EE+ KRDHRKL +E+ LF  +   G G+  W  KG  I   L +++R +
Sbjct: 185 PAQLVEYKKRKEEALKRDHRKLGKELGLFIFSNSVGPGLPLWTPKGTIIRSVLENFLREE 244

Query: 287 -IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR-TFALKPMNCPGH 344
            +K  Y  + TP +    L++ SGHW +Y+ +MF +   ++  +     F LKPMNCP H
Sbjct: 245 QLKRGYLPVVTPHIGKVDLFKTSGHWQNYKEDMFPLMSDNEVARGEEIGFVLKPMNCPFH 304

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           + ++   LKSYR+LPVRLAEFG+VYR E SG L GL RVRGFT DD+H+F T +Q+ +E 
Sbjct: 305 IQIYKSDLKSYRDLPVRLAEFGTVYRYEKSGELGGLTRVRGFTVDDSHLFVTPDQLDDEF 364

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPE---KRVGSDALWDDAENIMKGVLDTIKNSSQD 461
           L + NLI+S++++   +    +LS R     K +GSD +W+ ++N +   +  +      
Sbjct: 365 LNVVNLILSVFENLQLKNFKARLSFRDPSSNKYIGSDEVWEKSQNAIYRAVKMLN----- 419

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
            I+     GE AFYGPK ++I +DA+ R+WQ GT+QVD+NLP RFN  Y+    +K  P+
Sbjct: 420 -IDYFEAEGEAAFYGPKLDFIFQDALDREWQLGTVQVDYNLPERFNLEYIGEKGDKHRPI 478

Query: 522 MIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLS 581
           MIHRA FGS+ER IGI+IE + G+ PLWLSP+Q  +  ++   ++YA+ +   +    + 
Sbjct: 479 MIHRAPFGSLERLIGILIEEYVGDFPLWLSPVQVRILPVSDLYLDYAKGVMQTMLMSKIR 538

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            E D   E +   IR+   +KIP++ I G KE    S+ IR   S     + + D +  +
Sbjct: 539 AEVDTSGERLGKMIRKGEKEKIPVMAIIGSKEMETNSLNIRTRKSGELGLMPINDFMKSI 598

Query: 642 TK 643
            +
Sbjct: 599 LE 600


>gi|224438525|ref|ZP_03659445.1| threonyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
 gi|313144952|ref|ZP_07807145.1| threonyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
 gi|313129983|gb|EFR47600.1| threonyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
          Length = 603

 Score =  524 bits (1350), Expect = e-146,   Method: Composition-based stats.
 Identities = 239/610 (39%), Positives = 362/610 (59%), Gaps = 21/610 (3%)

Query: 37  KAVAVAINGKVCDLSD--PVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           + + +  N ++ DL     +      I       SL +IRHSCAH+MA+A++S++PE + 
Sbjct: 3   EVIGIKHNQQIYDLCTADELHINGENIHFDNSHESLEIIRHSCAHLMAQAIKSLYPEAKF 62

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            +GP++ +GFYYDF  +   S ++L  IE KM EI  +  P +K  L  + A    +   
Sbjct: 63  FVGPVVNEGFYYDFKVDSKISEEDLPSIESKMLEIAKKAYPIVKSTLLRKDAEA--KFAN 120

Query: 155 EAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNR 214
           +  K  ++  IP  + +++Y QG++ DLCRGPH+ +T  ++ F KL K+AGAY  GD   
Sbjct: 121 DELKQAVMSKIP-DDKLSVYTQGDFEDLCRGPHLPNTKLLQHF-KLTKIAGAYLGGDEKA 178

Query: 215 PMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGW 273
            ML RIYG A+  +Q L  YL+ +EE++KRDHRKL +EM LF   E+ G+G+  W  KG 
Sbjct: 179 QMLIRIYGIAFADKQSLKDYLFAIEEAKKRDHRKLGQEMGLFTFDEEIGAGLPIWLPKGA 238

Query: 274 KIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           ++ Q L   +   + +  YE +  P++L   +W++SGH+D+Y+ NM+       T  D +
Sbjct: 239 RLRQNLERLLTIALNERGYEPVRGPEILKSDVWKKSGHYDNYKENMYF------TTIDEQ 292

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
            + +KPMNC GH+ V+    +SYRELP+R  E+G V+R+E SG LHGL+RVR FTQDDAH
Sbjct: 293 EYGIKPMNCVGHIKVYQSSPRSYRELPLRFYEYGIVHRHEKSGVLHGLLRVREFTQDDAH 352

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
           +FC   Q+ +E   I +   SI   F F   M +LSTRP+K +G+D +W+ A N +K  L
Sbjct: 353 IFCQTNQIKDEVNHIISFTKSILDAFNFAYEM-ELSTRPDKSIGNDGVWESATNALKNAL 411

Query: 453 DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
           +      +++I   +  G GAFYGPK +  + DA+ R WQCGTIQVD NLP RF   Y +
Sbjct: 412 E------ENKIAYQIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDMNLPERFALSYTD 465

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIA 572
            ++ +  PVMIHRA+ GS ERF+ I+ E+F G  PL+++P Q I+  I  + + YA+E+ 
Sbjct: 466 ENNAQVQPVMIHRAILGSFERFVAILTEHFAGEFPLFIAPTQVILIPIGDAQLGYARELR 525

Query: 573 NLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
           N +       E   +NE++N KIR    +K+P+I++ G KE   + + IR         +
Sbjct: 526 NEIIKIGGYAEIMDKNESLNKKIRLAEKQKVPLIVVIGAKEVERKILAIRDRREKAQYGL 585

Query: 633 SLLDAIPILT 642
           S  + I  L 
Sbjct: 586 SQAEFITTLK 595


>gi|149195433|ref|ZP_01872516.1| threonyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
 gi|149134438|gb|EDM22931.1| threonyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
          Length = 613

 Score =  524 bits (1350), Expect = e-146,   Method: Composition-based stats.
 Identities = 245/616 (39%), Positives = 380/616 (61%), Gaps = 21/616 (3%)

Query: 37  KAVAVAINGKVCDLSDPVREGSIEIIT------PEDPRSLAVIRHSCAHIMAEAVQSIWP 90
             +   I   + DL   +   +I+I         +   +L +IRHS AH+MA+A++ ++P
Sbjct: 4   DIIGYKIGDNIFDLQT-IEAKNIDISDAKPIYFDDSEDALEIIRHSAAHLMAQAIKELYP 62

Query: 91  EVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELF 150
           + +  +GP IE+GFYYD     P +  +L  IEKKM++   +     +  +S ++A E  
Sbjct: 63  DAKFYVGPTIENGFYYDLKTSTPITDKDLKNIEKKMKQFAKKKIDITRYEISKDEAIE-- 120

Query: 151 ESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRG 210
           + K +  K E+L+ IP+   V++Y+QG++ DLCRGPH+ +T  +    KL KVAGAY  G
Sbjct: 121 KFKDDELKQEVLKMIPSD-VVSIYKQGDFEDLCRGPHLPNTKYLHNV-KLQKVAGAYLGG 178

Query: 211 DSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWH 269
           DSN+ ML+R+YGTA+ T++ L +YL  LEE+ KRDHRKL +E++L+   E+   G+  W 
Sbjct: 179 DSNKEMLTRVYGTAFATKEALQEYLKRLEEALKRDHRKLGKELELWLFDEEVAPGMPIWL 238

Query: 270 RKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCA-DDT 327
            +G  +   L   +    I+ +YE +  P++L   +W+ SGH+ +Y+ NM+  + A DD 
Sbjct: 239 PRGAMLRANLEKLLFSAHIQREYEPVRGPEILRSEMWKISGHYYNYKENMYFTEIAHDDN 298

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
            K    + +KPMNC  HV +F H ++SY+ELP+R  EFG+V+R+E SG LHGL+RVR FT
Sbjct: 299 QKQAEEYGIKPMNCLSHVKIFGHKVRSYKELPLRFFEFGTVHRHEKSGVLHGLLRVREFT 358

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENI 447
           QDDAH+FC  EQ+  E +K+ + + SI + FGF+  M ++STRPEK +GSD +W+ A   
Sbjct: 359 QDDAHIFCRPEQIEEEVIKVLDFVDSIMQRFGFKYEM-EISTRPEKSIGSDEIWEKATEA 417

Query: 448 MKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFN 507
           +K  L+ +          G+  G GAFYGPK +  + DAIGR WQCGTIQVDFNLP RF+
Sbjct: 418 LKNALNKLNR------EYGIDEGGGAFYGPKIDIKITDAIGRKWQCGTIQVDFNLPERFD 471

Query: 508 AFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEY 567
             Y++ ++E+  PVMIHRA+ GS ERFI I+ E++ G  P +++PI+AI   I+ + ++Y
Sbjct: 472 ISYIDENNERKRPVMIHRAIIGSFERFIAILTEHYAGEFPTFIAPIKAIFVPISENHIDY 531

Query: 568 AQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGST 627
           A+EI   L    L  E    N+++N +IR    +K+  ++I GD+E  + ++ IR     
Sbjct: 532 AKEIQKELLKDDLKTEIYASNDSLNKRIRNAEKQKVAYVVIIGDEEVKDGTVAIRDRRKR 591

Query: 628 TTQKVSLLDAIPILTK 643
           T  K+   + + ++ K
Sbjct: 592 TQYKMKKGEFVEMIKK 607


>gi|308805643|ref|XP_003080133.1| putative threonyl-tRNA synthetase (ISS) [Ostreococcus tauri]
 gi|116058593|emb|CAL54300.1| putative threonyl-tRNA synthetase (ISS) [Ostreococcus tauri]
          Length = 625

 Score =  524 bits (1350), Expect = e-146,   Method: Composition-based stats.
 Identities = 241/590 (40%), Positives = 354/590 (60%), Gaps = 23/590 (3%)

Query: 63  TPEDPRSLAVIRHS-----CAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSD 117
           T  D     +I         AH+MA AVQ ++P  Q  IGP IE GFYYDF   + F++ 
Sbjct: 39  TRRDAEKRRLIGEDFLTTQSAHVMAMAVQKVFPSAQCTIGPWIERGFYYDFFYPEGFTNQ 98

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           ++ +I+K+M +II +D P  ++ +S E+A        E YK+EIL++I   E +T+Y  G
Sbjct: 99  DMKKIQKEMYKIIRKDYPLRREEVSREEAERRIREINEPYKLEILDAIK-TEPITIYHIG 157

Query: 178 E-WFDLCRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
           + W+DLC GPHV STG++ +  F+L  VAGAYWRGD  +PML RIYGTAW   ++L  Y 
Sbjct: 158 DEWWDLCAGPHVESTGKLDQTAFELESVAGAYWRGDETKPMLQRIYGTAWENAEQLKAYT 217

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDG--SGVIFWHRKGWKIFQTLISYMRR-KIKDDYE 292
            F EE+++RDHR + ++++LF + +D    G++FWH KG ++   + +Y +   +   YE
Sbjct: 218 EFKEEAKRRDHRTIGKDLNLFSLQQDSAGGGLVFWHPKGAQMRHMIETYWKDLHLARGYE 277

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
            + +P V  Q LWQ SGH D Y  NM+          +   + LKPMNCP H+ V+  G 
Sbjct: 278 LLYSPHVARQELWQTSGHSDFYSENMYQPIKV-----EEEMYQLKPMNCPFHIVVYQDGY 332

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
            SY++LP+R AE G+VYR E SG++HGL RVRGFTQDDAH+FC  +Q+ +E  ++ +L  
Sbjct: 333 YSYKDLPIRWAELGTVYRYERSGTMHGLFRVRGFTQDDAHIFCLPDQITSEIKRVLDLTE 392

Query: 413 SIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
            I   FGF    V LSTRPEK VG DA+W  AEN ++  L       +   +  V  G G
Sbjct: 393 EILSTFGFTDFEVNLSTRPEKSVGEDAIWTTAENALRDAL------GEKGWDYIVDDGGG 446

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           AFYGPK +  + DAIGR WQC T+Q+DFNLP RF+  Y++  + K  P+MIHRA+FGS+E
Sbjct: 447 AFYGPKIDIKILDAIGRKWQCSTVQLDFNLPERFDLNYIDRDNNKQRPIMIHRAIFGSLE 506

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
           RF GI+ EN+ G  PLWL+P+Q  +  +T    +Y + +A  L+     +E     + + 
Sbjct: 507 RFFGILTENYAGEFPLWLAPVQVRLLPVTDEVSDYTEGVAAKLREAGCRVEI-CTGQRLA 565

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             +R     KIP++ + G  EA+  ++ +R +       +S+ + +  +T
Sbjct: 566 KLVRTAEKAKIPVMAVVGRDEAANNTLAVRTYKDGDVGSLSVDEVLSRIT 615


>gi|283955645|ref|ZP_06373138.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336]
 gi|283792870|gb|EFC31646.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336]
          Length = 602

 Score =  524 bits (1349), Expect = e-146,   Method: Composition-based stats.
 Identities = 247/616 (40%), Positives = 376/616 (61%), Gaps = 22/616 (3%)

Query: 34  LAKKAVAVAINGKVCDLSDPVREGSI-EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEV 92
           + K+ +A   N  + D S  V++ ++ EI       SL VIRHSCAH+MA+A++S++PE 
Sbjct: 1   MEKEVIAYLDNETIID-SQSVKDTNLKEIYFDNSKESLEVIRHSCAHLMAQAIKSLYPEA 59

Query: 93  QVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFES 152
           +  +GP+IEDGFYYDF  E     ++L +IEKKM+E+        K  ++  +A    + 
Sbjct: 60  KFFVGPVIEDGFYYDFRVESKIGEEDLVKIEKKMKELAEAKIEISKYEITKNEALA--KF 117

Query: 153 KKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDS 212
           + +  K E+L  IP    V++Y+QGE+ DLCRGPHV +T  ++ FFKL +VAGAY  GD 
Sbjct: 118 QNDDLKQEVLLRIPDGA-VSIYKQGEFEDLCRGPHVPNTKFLR-FFKLTRVAGAYLGGDE 175

Query: 213 NRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRK 271
            R ML+RIYGTA+  ++ L +YL  +EE++KRDHRKL  E+ LF   ++ G G+  W   
Sbjct: 176 KREMLTRIYGTAFADKESLKEYLTIIEEAKKRDHRKLGTELKLFTFDDEIGGGLPIWLSN 235

Query: 272 GWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G ++   L   + +      YE +  P++L    W+ SGH+ +Y+ NM+  +       D
Sbjct: 236 GARLRSKLEHMLYKIHRLRGYEPVRGPELLKADAWKISGHYANYKENMYFTQI------D 289

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
            + + +KPMNC GH+ ++   ++SYR+LP++  E+G V+R+E SG LHGL RVR FTQDD
Sbjct: 290 EQEYGIKPMNCVGHIKIYQSDVRSYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFTQDD 349

Query: 391 AHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKG 450
           AH+FC   Q+  + L+I   + ++ K F F   M ++ST+PEK +G D +W+ A   +K 
Sbjct: 350 AHIFCMPSQIKEQVLEILAFVDNLMKLFDFSYEM-EISTKPEKAIGDDEIWEIATKALKE 408

Query: 451 VLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFY 510
            LD      +  +  G+  G GAFYGPK +  + DA+ R WQCGTIQVDFNLPSRF   Y
Sbjct: 409 ALD------EQGLKYGIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDFNLPSRFKLEY 462

Query: 511 VNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQE 570
            +S +EK  PVM+HRA+ GS ERFIGI+ E+  G  P +++P    +  I  + + YA+E
Sbjct: 463 TDSDNEKKQPVMLHRAILGSFERFIGILTEHCAGEFPFFIAPTAVGIVPIGEAHIAYAKE 522

Query: 571 IANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
           I   L   ++  E   +NE+++ KIR    +K+P+I++ GD E ++RS+ +R   +   +
Sbjct: 523 IQKELLELNIDSEVYEKNESLSKKIRIAEKQKLPMILVLGDDEVAKRSVALRDRRAKEQK 582

Query: 631 KVSLLDAIPILTKESL 646
            +SL + I  L KE +
Sbjct: 583 NLSLDEFI-KLVKEKM 597


>gi|172040605|ref|YP_001800319.1| threonyl-tRNA synthetase [Corynebacterium urealyticum DSM 7109]
 gi|171851909|emb|CAQ04885.1| unnamed protein product [Corynebacterium urealyticum DSM 7109]
          Length = 662

 Score =  523 bits (1348), Expect = e-146,   Method: Composition-based stats.
 Identities = 232/644 (36%), Positives = 349/644 (54%), Gaps = 40/644 (6%)

Query: 32  RSLAKKAVAVAIN--GKVCDLSD-PVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSI 88
            +   +A+ V  +  G + DL+  P  +  +  I  +      VIRHS AH++A+AVQ +
Sbjct: 7   PNKGPEAIVVVKDPEGNLRDLAWAPEVDTEVTAIASDTEEGRGVIRHSTAHVLAQAVQRV 66

Query: 89  WPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE 148
           +P  ++ IGP I+ GFYYDFD  +PF+ ++L +IE++M++II     F ++  S      
Sbjct: 67  FPGTKLGIGPAIDGGFYYDFDVAEPFTPEDLKKIEREMKKIIKSGQRFERKAYSSND-EA 125

Query: 149 LFESKKEAYKVEILESI----PAKENVTLYRQGE---------------WFDLCRGPHVR 189
             E   E YK+E++E      P  E       GE               W+DLCRGPHV 
Sbjct: 126 RTEYAAEPYKLELIEDKGNVAPDSEEAMEVGAGELTAYSNVNPRTGEVEWYDLCRGPHVP 185

Query: 190 STGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKL 249
           +T  +  F        AYWRGD +   L RIYGTAW ++++L +Y + LEE+EKRDHR+L
Sbjct: 186 TTRYIPAFAITRSS-AAYWRGDQDNAGLQRIYGTAWESKEKLAEYQHMLEEAEKRDHRRL 244

Query: 250 AREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQ 307
             E+DLF   ++ GSG   +H  G  +   +  + RR  +   Y  +NTP +    L+Q+
Sbjct: 245 GAELDLFSFPDEVGSGFPVFHPNGGIVRLEMEEHSRRRHLASGYSFVNTPHITKGDLFQK 304

Query: 308 SGHWDSYRANMFAVKCADDTIKD-------LRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           SGH D Y   MF     D    +        + +  KPMNCP H  +F    +SYRELP+
Sbjct: 305 SGHLDFYAEGMFPPMQLDGETDEEGNVTKPGQDYYAKPMNCPMHNLIFASRGRSYRELPL 364

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RL EFG+VYR E SG +HGL R RGFTQDDAH++CT++Q+ +E   +   IIS+ +D+G 
Sbjct: 365 RLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYCTEDQLEDELTTVLEFIISLLRDYGL 424

Query: 421 EKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           +   ++LST+  K  VG+D +W+ +  I++ V +      +  +         AFYGPK 
Sbjct: 425 DDFYLELSTKDPKKFVGTDEIWERSTEILQRVAE------KSGLELVPDPAGAAFYGPKI 478

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
               +DAIGR WQ  T+Q+DFNLP RF+  Y      K  P+MIHRA+FGSIERF G+++
Sbjct: 479 SVQARDAIGRTWQMSTVQLDFNLPERFDLEYTAPDGTKKRPIMIHRALFGSIERFFGVLL 538

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E++ G  P WL+P Q +   +     EY +E    L+   +  E D  ++ +  KIR H+
Sbjct: 539 EHYAGAFPAWLAPHQVMGIPVAEDFTEYLEEFVADLRKDGIRAEVDTSDDRMQKKIRTHT 598

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             KIP +++ G ++    ++  R    T    V   +A   + +
Sbjct: 599 KGKIPFMLLVGGRDVENGAVSFRFHDGTQVNGVPREEAAKAIKE 642


>gi|86149734|ref|ZP_01067964.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|85840002|gb|EAQ57261.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CF93-6]
          Length = 602

 Score =  523 bits (1348), Expect = e-146,   Method: Composition-based stats.
 Identities = 245/615 (39%), Positives = 370/615 (60%), Gaps = 20/615 (3%)

Query: 34  LAKKAVAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQ 93
           + K+ +A   N  + D          EI       SL VIRHSCAH+MA+A++S++PE +
Sbjct: 1   MEKEVIAYLDNETIIDSQSVKNTNLKEIYFDNSKESLEVIRHSCAHLMAQAIKSLYPEAK 60

Query: 94  VAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESK 153
             +GP+IEDGFYYDF  E     ++L +IEKKM+E+        K  ++  +A    + +
Sbjct: 61  FFVGPVIEDGFYYDFRVESKIGEEDLVKIEKKMKELAEAKIEISKYEITKSEALA--KFQ 118

Query: 154 KEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSN 213
            +  K E+L  IP    V++Y+QGE+ DLCRGPHV +T  ++ FFKL +VAGAY  GD  
Sbjct: 119 NDDLKQEVLLRIP-DRAVSIYKQGEFEDLCRGPHVPNTKFLR-FFKLTRVAGAYLGGDEK 176

Query: 214 RPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKG 272
           R ML+RIYGTA+  ++ L +YL  +EE++KRDHRKL  E+ LF   ++ G G+  W   G
Sbjct: 177 REMLTRIYGTAFADKESLKEYLTIIEEAKKRDHRKLGTELKLFTFDDEIGGGLPIWLSNG 236

Query: 273 WKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
            ++   L   + +      YE +  P++L    W+ SGH+ +Y+ NM+  +       D 
Sbjct: 237 ARLRSKLEHMLYKIHRLRGYEPVRGPELLKADAWKISGHYANYKENMYFTQI------DE 290

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
           + + +KPMNC GH+ ++   ++SYR+LP++  E+G V+R+E SG LHGL RVR FTQDDA
Sbjct: 291 QEYGIKPMNCVGHIKIYQSDVRSYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFTQDDA 350

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
           H+FC   Q+  + L+I   + ++ K F F   M ++ST+PEK +G D +W+ A   +K  
Sbjct: 351 HIFCMPSQIKEQVLEILAFVDNLMKLFDFSYEM-EISTKPEKAIGDDEIWEIATKALKEA 409

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
           LD      +  +  G+  G GAFYGPK +  + DA+ R WQCGTIQVDFNLPSRF   Y 
Sbjct: 410 LD------EQGLKYGIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDFNLPSRFKLEYT 463

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
           +S +EK  PVM+HRA+ GS ERFIGI+ E+  G  P +++P    +  I  + + YA+EI
Sbjct: 464 DSDNEKKQPVMLHRAILGSFERFIGILTEHCAGEFPFFIAPTAVGIVPIGEAHIAYAKEI 523

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
              L   ++  E   +NE+++ KIR    +K+P+I++ GD E ++RS+ +R   +   + 
Sbjct: 524 QKELLELNIDSEVYEKNESLSKKIRTAEKQKLPMILVLGDDEVAKRSVALRDRRAKEQKN 583

Query: 632 VSLLDAIPILTKESL 646
           +SL + I  L KE +
Sbjct: 584 LSLDEFI-KLVKEKM 597


>gi|156354210|ref|XP_001623293.1| predicted protein [Nematostella vectensis]
 gi|156209976|gb|EDO31193.1| predicted protein [Nematostella vectensis]
          Length = 559

 Score =  523 bits (1348), Expect = e-146,   Method: Composition-based stats.
 Identities = 203/562 (36%), Positives = 318/562 (56%), Gaps = 21/562 (3%)

Query: 85  VQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQIEKKMQEIIARDSPFLKQYLSH 143
           ++  +    +  GP IE+G+YYD   E +  SS++ + ++   ++I     PF +  +  
Sbjct: 1   MERHYGGC-LCYGPPIEEGYYYDMHLEGRQVSSNDFSSLDNLTKKITKEKQPFERLEMKK 59

Query: 144 EKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKV 203
           E   E+F+     +K  IL +       T+YR G   DLCRGPHVR TG++K    + K 
Sbjct: 60  EDLLEMFKY--NEFKCRILNNKVKTPTTTVYRCGPLIDLCRGPHVRHTGKIKSI-AVTKN 116

Query: 204 AGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGS 263
           +  YW G+     L RIYG ++   +++ ++  F EE+ KRDHRK+ R+ +LF   E   
Sbjct: 117 SATYWEGNCEAESLQRIYGISFPNDKQMKEWKKFQEEAAKRDHRKIGRDQELFFFHELSP 176

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK 322
           G  F+  KG  I+ TLI++++ +     ++E+ +P +    LW+ SGHW  Y  +MF+ +
Sbjct: 177 GSCFFLPKGAVIYNTLINFIKEQYWKRGFQEVVSPNIYSTKLWETSGHWQHYSEHMFSFE 236

Query: 323 CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMR 382
                  +  ++ALKPMNCPGH  +F+H  +S+RELP+R+A+FG ++RNE SG+L GL R
Sbjct: 237 V------EKESYALKPMNCPGHCLMFDHRPRSWRELPLRMADFGVLHRNELSGTLSGLTR 290

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWD 442
           VR F QDDAH+FCT +Q+  E +   + +  +Y  FGF   +  LSTRPEK +G   LW+
Sbjct: 291 VRRFQQDDAHIFCTADQIGQEIISCLDFLKHVYGVFGFTFKLN-LSTRPEKYLGKIELWN 349

Query: 443 DAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNL 502
            AE  ++  L+    +        +  G+GAFYGPK +  ++DA+ R  QC TIQ+DF L
Sbjct: 350 QAEKELEAALNGFGQAW------VLNPGDGAFYGPKIDIQIQDALRRYHQCATIQLDFQL 403

Query: 503 PSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT 561
           P RFN  YV     E+  PV++HRA+ GS+ER I I+ E+F G  P WLSP QAIV  I 
Sbjct: 404 PERFNLTYVTGEGDERKRPVIVHRAILGSVERMIAILTESFGGKWPFWLSPRQAIVIPIG 463

Query: 562 SSAVEYAQEIANLLKSHHLSIETD-FRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
               EYAQ++ + + +    ++ D     T+N K+R   + +   I + G+KEA+  ++ 
Sbjct: 464 PKYDEYAQKVMSDILAAGYHVDADLDHGTTLNKKVRNAQLAQYNFIFVVGEKEATTGTVN 523

Query: 621 IRRFGSTTTQKVSLLDAIPILT 642
           +R   +    + S+   +    
Sbjct: 524 VRTRDNKVHGEFSVEAVLNKFA 545


>gi|315635477|ref|ZP_07890743.1| threonine--tRNA ligase [Arcobacter butzleri JV22]
 gi|315480235|gb|EFU70902.1| threonine--tRNA ligase [Arcobacter butzleri JV22]
          Length = 602

 Score =  523 bits (1348), Expect = e-146,   Method: Composition-based stats.
 Identities = 239/609 (39%), Positives = 369/609 (60%), Gaps = 21/609 (3%)

Query: 39  VAVAINGKVCDLSDP--VREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAI 96
           + +  +G++ DL     +     EI + +   SL ++RHSCAH+MA+A++ ++PE +  +
Sbjct: 4   IGILKDGQIYDLQTAEALNIQGDEIKSDDSKESLDILRHSCAHLMAQAIKELYPEAKFFV 63

Query: 97  GPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEA 156
           GP++++GFYYDF      S DEL  IEKKM+EI  R  P  +   + E+  E  + K + 
Sbjct: 64  GPVVKEGFYYDFKVNSKISDDELPTIEKKMKEIADRKLPITRHETTKEEFYE--KFKNDE 121

Query: 157 YKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPM 216
            K  +L++I   + +T+YRQG++ DLCRGPH+ +T  ++ F KL +VAGAY  GD    M
Sbjct: 122 LKQAVLKNIK-DDVLTIYRQGDFEDLCRGPHLPNTRMIRSF-KLTRVAGAYLGGDEKNEM 179

Query: 217 LSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKI 275
           ++RIYG A+  +Q L  Y   LEE++KRDHRKL  E++LF   +D   G+  W  KG ++
Sbjct: 180 ITRIYGIAFFDKQALFDYTRMLEEAKKRDHRKLGTELELFTFNDDVGAGLPMWLPKGARL 239

Query: 276 FQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
              L   + +      YE +  P++L   +W+ SGH+ +Y+ NM+       T  D + +
Sbjct: 240 RSKLEHLLYKAHRIRGYEPVRGPEILKAEMWKISGHYANYKENMYF------TTIDDQEY 293

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
            +KPMNC GH+ +F + L SY+ELP +L E+G V+R+E SG++HGL RVR FTQDD+H+F
Sbjct: 294 GIKPMNCVGHIQIFKNNLVSYKELPKKLFEYGVVHRHEMSGAMHGLFRVREFTQDDSHIF 353

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDT 454
           CT++Q+     ++   + ++ K F F+  + ++ST+PEK +G D  W+     +   LD 
Sbjct: 354 CTQDQIKQVIFEVLEFVDTLLKVFDFKYEI-EVSTKPEKAIGDDIFWEKTTKGIMDALD- 411

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH 514
                ++ I+ G+  G GAFYGPK +  + DAIGR WQCGT+QVD NLPSRFN  Y+N  
Sbjct: 412 -----ENNISYGIDEGGGAFYGPKIDIKILDAIGRKWQCGTVQVDMNLPSRFNVEYINEK 466

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANL 574
            EK  PVMIHRA+ GS ERFIGI+ E+  G  P  ++P Q I   I  S VEYA+E+   
Sbjct: 467 GEKEQPVMIHRAILGSFERFIGILTEHCAGEFPFIIAPTQVIFVPIADSHVEYAKELQKA 526

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           L  + L  E    NE++N +IR    +++P+I++ GD+E   +++ +R   +     +S 
Sbjct: 527 LLENDLDSEIYNMNESLNKRIRMAEKQRVPMIVVIGDEEVENKTVALRNRRTREQSNMSK 586

Query: 635 LDAIPILTK 643
            + I +L +
Sbjct: 587 NEFISMLNE 595


>gi|283955362|ref|ZP_06372861.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414]
 gi|283793122|gb|EFC31892.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414]
          Length = 602

 Score =  523 bits (1347), Expect = e-146,   Method: Composition-based stats.
 Identities = 243/615 (39%), Positives = 372/615 (60%), Gaps = 20/615 (3%)

Query: 34  LAKKAVAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQ 93
           + K+ +A   N  + D          EI       SL VIRHSCAH+MA+A+++++PE +
Sbjct: 1   MEKEVIAYLDNETIIDSQSVKNTNLKEIYFDNSKESLEVIRHSCAHLMAQAIKNLYPEAK 60

Query: 94  VAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESK 153
             +GP+IEDGFYYDF  E     ++L +IEKKM+E++       K  ++  +A    + +
Sbjct: 61  FFVGPVIEDGFYYDFRVESKIGEEDLVKIEKKMKELVEAKIVISKYEITKNEALA--KFQ 118

Query: 154 KEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSN 213
            +  K E+L  IP    V++Y+QGE+ DLCRGPHV +T  ++ FFKL +VAGAY  GD  
Sbjct: 119 NDDLKQEVLSRIP-DGTVSIYKQGEFEDLCRGPHVPNTKFLR-FFKLTRVAGAYLGGDEK 176

Query: 214 RPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKG 272
           R ML+RIYGTA+  ++ L +YL  +EE++KRDHRKL  E+ LF   ++ G G+  W   G
Sbjct: 177 REMLTRIYGTAFADKESLKEYLTIIEEAKKRDHRKLGAELKLFTFDDEIGGGLPIWLSNG 236

Query: 273 WKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
            ++   L   + +      YE +  P++L    W+ SGH+ +Y+ NM+  +       D 
Sbjct: 237 ARLRSKLEHMLYKIHRLRGYEPVRGPELLKADAWKISGHYANYKENMYFTQI------DE 290

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
           + + +KPMNC GH+ ++   ++SYR+LP++  E+G V+R+E SG LHGL RVR FTQDDA
Sbjct: 291 QEYGIKPMNCVGHIKIYQSNVRSYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFTQDDA 350

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
           H+FC   Q+  + L+I   + ++ K F F   M ++ST+PEK +G D +W+ A   +K  
Sbjct: 351 HIFCMPSQIKEQVLEILAFVDNLMKLFDFSYEM-EISTKPEKAIGDDEIWEVATKALKEA 409

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
           LD      +  +  G+  G GAFYGPK +  + DA+ R WQCGTIQVDFNLP+RF   Y 
Sbjct: 410 LD------EQGLKYGIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDFNLPNRFKLEYT 463

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
           +S++EK  PVM+HRA+ GS ERFIGI+ E+  G  P +++P    +  I  + + YA+EI
Sbjct: 464 DSNNEKKQPVMLHRAILGSFERFIGILTEHCAGEFPFFIAPTAIGIVPIGEAHIAYAKEI 523

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
              L   ++  E   +NE+++ KIR    +K+P+I++ GD E ++RS+ +R   +   + 
Sbjct: 524 QKELLKFNIDSEVYEKNESLSKKIRIAEKQKLPMILVLGDDEVAKRSVALRDRRAKEQKN 583

Query: 632 VSLLDAIPILTKESL 646
           +SL + I  L KE +
Sbjct: 584 LSLDEFI-KLVKEKM 597


>gi|315930217|gb|EFV09332.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 305]
          Length = 602

 Score =  523 bits (1347), Expect = e-146,   Method: Composition-based stats.
 Identities = 245/615 (39%), Positives = 371/615 (60%), Gaps = 20/615 (3%)

Query: 34  LAKKAVAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQ 93
           + K+ +A   N  + D          EI       SL VIRHSCAH+MA+A++S++PE +
Sbjct: 1   MEKEVIAYLDNETIIDSQSVKNTNLKEIYFDNSKESLEVIRHSCAHLMAQAIKSLYPEAK 60

Query: 94  VAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESK 153
             +GP+IEDGFYYDF  E     ++L +IEKKM+E+        K  ++  +A    + +
Sbjct: 61  FFVGPVIEDGFYYDFRVESKIGEEDLVKIEKKMKELAEAKIEISKYEITKSEALA--KFQ 118

Query: 154 KEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSN 213
            +  K E+L  IP    V++Y+QGE+ DLCRGPHV +T  ++ FFKL +VAGAY  GD  
Sbjct: 119 NDDLKQEVLLRIP-DRAVSIYKQGEFEDLCRGPHVPNTKFLR-FFKLTRVAGAYLGGDEK 176

Query: 214 RPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKG 272
           R ML+RIYGTA+  ++ L +YL  +EE++KRDHRKL  E+ LF   ++ G G+  W   G
Sbjct: 177 REMLTRIYGTAFADKESLKEYLTIIEEAKKRDHRKLGTELKLFTFDDEIGGGLPIWLSNG 236

Query: 273 WKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
            ++   L   + +      YE +  P++L    W+ SGH+ +Y+ NM+  +       D 
Sbjct: 237 ARLRSKLEHMLYKIHRLRGYEPVRGPELLKADAWKISGHYANYKENMYFTQI------DE 290

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
           + + +KPMNC GH+ ++   ++SYR+LP++  E+G V+R+E SG LHGL RVR FTQDDA
Sbjct: 291 QEYGIKPMNCVGHIKIYQSDVRSYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFTQDDA 350

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
           H+FC   Q+  + L+I   + ++ K F F   M ++ST+PEK +G D +W+ A   +K  
Sbjct: 351 HIFCMPSQIKEQVLEILAFVDNLMKLFDFSYEM-EISTKPEKAIGDDEIWEIATKALKEA 409

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
           LD      +  +  G+  G GAFYGPK +  + DA+ R WQCGTIQVDFNLPSRF   Y 
Sbjct: 410 LD------EQGLKYGIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDFNLPSRFKLEYT 463

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
           +S +EK  PVM+HRA+ GS ERFIGI+ E+  G  P +++P    +  I  + ++YA+EI
Sbjct: 464 DSDNEKKQPVMLHRAILGSFERFIGILTEHCAGEFPFFIAPTAVGIVPIGEAHIDYAKEI 523

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
              L   ++  E   +NE+++ KIR    +K+P+I++ GD E ++RS+ +R   +   + 
Sbjct: 524 QKELLELNIDSEVYEKNESLSKKIRIAEKQKLPMILVLGDDEVAKRSVALRDRRAKEQKN 583

Query: 632 VSLLDAIPILTKESL 646
           +SL + I  L KE +
Sbjct: 584 LSLDEFI-KLVKEKM 597


>gi|213966110|ref|ZP_03394297.1| threonyl-tRNA synthetase [Corynebacterium amycolatum SK46]
 gi|213951208|gb|EEB62603.1| threonyl-tRNA synthetase [Corynebacterium amycolatum SK46]
          Length = 686

 Score =  523 bits (1347), Expect = e-146,   Method: Composition-based stats.
 Identities = 244/666 (36%), Positives = 367/666 (55%), Gaps = 47/666 (7%)

Query: 16  NFPVHATGSDVAESIS-RSLAKKAVAVAIN--GKVCDLSD-PVREGSIEIITPEDPRSLA 71
           + P   +  +    +   +    A+    +  G + DLS  P  E   E +    P    
Sbjct: 12  SVPAGVSAGEAMRDLGFPNKGVDAIVCVRDPEGNLKDLSFKPEVETVFEPVPANTPDGRD 71

Query: 72  VIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIA 131
           VIRHS  H+MA+AVQ  +P  ++ IGP I++GFYYDF  ++PFS ++L +IEK+M++II 
Sbjct: 72  VIRHSATHVMAQAVQLEFPGTKLGIGPAIDNGFYYDFRVDEPFSPEDLKRIEKRMKKIIK 131

Query: 132 RDSPFLKQYL-SHEKARELFESKKEAYKVEILESIPAK----------------ENVTLY 174
               F +    S ++A+E      E YK+E++    A                   +T Y
Sbjct: 132 SGQRFERFAFESADEAQE--ALADEPYKLELIVEKSAGKVSEDDEANVDVGGAGTTLTGY 189

Query: 175 R-------QGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNT 227
           R       + EWFDLCRGPHV +T  +  F K+ + + AYWRGD +R  L R+YGTAW +
Sbjct: 190 RNVNPRTGETEWFDLCRGPHVPTTRYIPAF-KITRSSAAYWRGDQSRDNLQRVYGTAWES 248

Query: 228 QQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR- 285
           ++ L +YL  + E+EKRDHR+L  E+DLF   ++ GSG   +H KG  I   +  + RR 
Sbjct: 249 KEALDEYLDRMLEAEKRDHRRLGSELDLFSFPDEIGSGFPVFHVKGGIIRNEMEQHSRRR 308

Query: 286 KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL-------RTFALKP 338
            I+  Y+ +NTP V    L+++SGH D Y   MF     D    +        + + +KP
Sbjct: 309 HIEAGYDFVNTPHVTKGDLFKKSGHLDFYADGMFPPMQLDGEYDEHGNCTKAPQDYYVKP 368

Query: 339 MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE 398
           MNCP H  +F    +SYRELP+R+ EFG+VYR E SG +HGL R RGFTQDDAH++CT++
Sbjct: 369 MNCPMHNLIFASRGRSYRELPIRMFEFGTVYRYEKSGVIHGLTRARGFTQDDAHIYCTED 428

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDTIKN 457
           Q+  E   + + IIS+ +D+G +   ++LST+ EK  VGSD +W+ +  I++ V D    
Sbjct: 429 QLEEELTNVLDFIISLLRDYGLDDFYLELSTKDEKKFVGSDEIWEKSTAILQRVADASG- 487

Query: 458 SSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK 517
                +      G  AFYGPK     +DAIGR WQ  T+Q+DFNLP RF   Y      K
Sbjct: 488 -----LELVPDPGGAAFYGPKISVQARDAIGRTWQMSTVQLDFNLPERFELEYTAPDGTK 542

Query: 518 CHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKS 577
             P+MIHRA+FGSIERF G+++E++ G  P WL+P Q +   +    + + ++ A  LKS
Sbjct: 543 KRPIMIHRALFGSIERFFGVLLEHYAGAFPAWLAPEQVVGIPVADDCIPHLEDFAAQLKS 602

Query: 578 HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
             + +  D  ++ +  KIR H+  K+P +I+ G ++    ++  R    T    V++  A
Sbjct: 603 RGIRVHVDTSDDRMQKKIRNHTQAKVPFMILAGARDIEAGAVSFRFLDGTQINGVAVEKA 662

Query: 638 IPILTK 643
           + I+  
Sbjct: 663 VDIICD 668


>gi|197294184|ref|YP_001798725.1| threonyl-tRNA synthetase [Candidatus Phytoplasma australiense]
 gi|226701405|sp|B1V8W6|SYT_PHYAS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|171853511|emb|CAM11353.1| Threonyl-tRNA synthetase [Candidatus Phytoplasma australiense]
          Length = 641

 Score =  523 bits (1347), Expect = e-146,   Method: Composition-based stats.
 Identities = 229/652 (35%), Positives = 377/652 (57%), Gaps = 23/652 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+   +    +FP   T  ++ ++  +   KK VA   N K  +L  P+ ++G +EI+
Sbjct: 1   MIKINLLNHQSHSFPSKTTPLEIWKNWLKKTLKKPVAALFNQKFIELDYPLTQDGDLEIL 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQ 121
              +P+SL V+ HS AH+MA+A+Q ++P     IGP I++GFYYD D      S  +L  
Sbjct: 61  AESNPKSLFVLNHSTAHLMAQAIQRLYPNALFTIGPAIKEGFYYDIDFQNHSISEKDLPT 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEKKM E+   +   + + ++H++A+ L       YK+ +LE     E++T+  QGE+ D
Sbjct: 121 IEKKMHEVALENHSMIMKKVTHDEAKRL--FSYNPYKLILLEKHKE-EDITVCHQGEFID 177

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG H+     +K F KL+K++G+Y++GD+    L+RIYGT++  +++L  YL  LEE 
Sbjct: 178 LCRGGHIPKLSLIKHF-KLLKISGSYFQGDAKNKSLTRIYGTSFFKKEDLGNYLKLLEER 236

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           ++RDH++L +++DLF  +++   G+ FW  KG  + + +  Y+  +++   Y  + TP +
Sbjct: 237 KERDHKRLNKKLDLFMFSQEVGLGLPFWLPKGATLRRIVERYIVDKELSHQYHHVYTPIM 296

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +  L++ SGH + Y  NMF V   ++         L+PMNCP H+ ++    +SY+ELP
Sbjct: 297 ANVELYRTSGHLEHYSQNMFPVMQLEN----KEKIVLRPMNCPHHMMIYKKSPRSYKELP 352

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG++ GL RVR    +DAH F   +Q+  E  KI NLI+ +Y+DF 
Sbjct: 353 LRIAELGMMHRFEKSGAVSGLQRVREMNLNDAHNFVRPDQIEEEIKKIINLILEVYRDFK 412

Query: 420 FEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
             K   +LS R  +        D +W  AENI+K  +  +    ++ I      G+ AFY
Sbjct: 413 ITKYEFRLSYRDPQDKEKYFPDDNMWQHAENILKKTIQELNLPFREAI------GDAAFY 466

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +  A+G +    TIQ+DF LP +F+  +++++++ C PV+IHRA+  ++ERF+
Sbjct: 467 GPKLDVQVLTALGNEETLSTIQLDFLLPQKFDLTFIDANNKHCRPVVIHRAIVSTLERFL 526

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNETINYK 594
             +IE  KG  PLWL+P+Q ++  ++SS  ++Y QEI  LL S  L  E + +  T+ YK
Sbjct: 527 SHLIEENKGVFPLWLAPVQILLIPVSSSVNLKYTQEIKELLLSQGLRAEINSKEATLGYK 586

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           IRE    KIP  I+ GD E ++  I  R++G       ++   I  L +E +
Sbjct: 587 IREAQELKIPYQIVVGDNEIAKNLITFRKYGQKNQTTTNIETFISSLNQEIM 638


>gi|154148459|ref|YP_001406198.1| threonyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381]
 gi|171769701|sp|A7I107|SYT_CAMHC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|153804468|gb|ABS51475.1| threonyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381]
          Length = 609

 Score =  523 bits (1346), Expect = e-146,   Method: Composition-based stats.
 Identities = 241/618 (38%), Positives = 367/618 (59%), Gaps = 29/618 (4%)

Query: 37  KAVAVAINGKVCDLSD-----PVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE 91
             +A  ++G++ D         V+    EI       +L VIRHSCAH+MA+A+ +++P 
Sbjct: 3   DIIAYKVDGEIVDTQSFKSLKNVKNAE-EIYFDNSEDALKVIRHSCAHLMAQAILALYPN 61

Query: 92  VQVAIGPIIEDGFYYDF----DKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKAR 147
            +  +GP IEDGFYYDF    +  +    ++L  IEKKM+E I       K   +  +  
Sbjct: 62  AKFFVGPAIEDGFYYDFRVTKENGEKLGKEDLQAIEKKMKEFIDAKEEIAKICSTKSEIA 121

Query: 148 ELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAY 207
              E K +  K E+L+ IP  E V++Y+QG++ D+CRGPHV +T  ++ FFKL +VAGAY
Sbjct: 122 --NEFKNDDLKQEVLKRIPDGE-VSVYKQGDFKDICRGPHVPNTKFLR-FFKLTRVAGAY 177

Query: 208 WRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIA-EDGSGVI 266
             GD  R ML+RIYGTA+  ++ L +YL  LEE++KRDHR +  EM LF    + G+G+ 
Sbjct: 178 LGGDEKREMLTRIYGTAFADKENLNEYLRILEEAKKRDHRIIGNEMKLFTFDDQIGAGLP 237

Query: 267 FWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD 325
            W   G ++   L   +     +  YE +  P++L    W+ SGH+ +Y+ NM+  K   
Sbjct: 238 VWLPNGARMRSKLEKILFGVHRRRGYEPVRGPEILKADAWKISGHYTNYKENMYFTKI-- 295

Query: 326 DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRG 385
               D + + +KPMNC GH+ V+   ++SYR+LP++  E+G V+R+E SG +HGL RVR 
Sbjct: 296 ----DEQEYGIKPMNCVGHIKVYQSEIRSYRDLPLKFFEYGVVHRHEKSGVMHGLFRVRE 351

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
           FTQDDAH+FC   Q+    L+I + +  I K+FGF   M ++ST+PEK +G D +W+ A 
Sbjct: 352 FTQDDAHIFCMPSQIKENVLEILDFVDKIMKNFGFSYEM-EISTKPEKAIGDDKVWEIAT 410

Query: 446 NIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSR 505
           N +K  LD      ++    G+  G GAFYGPK +  + DA+ R WQCGTIQVDFNLPSR
Sbjct: 411 NALKEALD------ENGFKYGIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDFNLPSR 464

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAV 565
           F+  Y++ ++E+  PVM+HRA+ GS ERFIGI+IE+  G LP +++P    +  I  + +
Sbjct: 465 FDLGYIDENNERKQPVMLHRAILGSFERFIGILIEHTAGELPFFIAPTGVSIIPINDAHL 524

Query: 566 EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
            YA+E+   L +  +  E   +NET+N +IR     ++P+I++ GD E   RS+ +R   
Sbjct: 525 NYAKEVQKALANLEVDSEILSKNETLNKRIRTAEKGRVPMILVLGDNEVKNRSVALRDRR 584

Query: 626 STTTQKVSLLDAIPILTK 643
           +     +SL + +  +  
Sbjct: 585 ARAQSNLSLDEFLEFVKN 602


>gi|57237210|ref|YP_178222.1| threonyl-tRNA synthetase [Campylobacter jejuni RM1221]
 gi|73919779|sp|Q5HWW3|SYT_CAMJR RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|57166014|gb|AAW34793.1| threonyl-tRNA synthetase [Campylobacter jejuni RM1221]
 gi|315057643|gb|ADT71972.1| Threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni S3]
          Length = 602

 Score =  522 bits (1345), Expect = e-146,   Method: Composition-based stats.
 Identities = 245/615 (39%), Positives = 370/615 (60%), Gaps = 20/615 (3%)

Query: 34  LAKKAVAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQ 93
           + K+ +A   N  + D          EI       SL VIRHSCAH+MA+A++S++PE +
Sbjct: 1   MEKEVIAYLDNETIIDSQSVKNTNLKEIYFDNSKESLEVIRHSCAHLMAQAIKSLYPEAK 60

Query: 94  VAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESK 153
             +GP+IEDGFYYDF  E     ++L +IEKKM+E+        K  ++  +A    + +
Sbjct: 61  FFVGPVIEDGFYYDFRVESKIGEEDLVKIEKKMKELAEAKIEISKYEITKNEALA--KFQ 118

Query: 154 KEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSN 213
            +  K E+L  IP    V++Y+QGE+ DLCRGPHV +T  ++ FFKL +VAGAY  GD  
Sbjct: 119 NDDLKQEVLLRIPDGA-VSIYKQGEFEDLCRGPHVPNTKFLR-FFKLTRVAGAYLDGDEK 176

Query: 214 RPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKG 272
           R ML+RIYGTA+  ++ L +YL  +EE++KRDHRKL  E+ LF   ++ G G+  W   G
Sbjct: 177 REMLTRIYGTAFADKESLKEYLTIIEEAKKRDHRKLGTELKLFTFDDEIGGGLPIWLSNG 236

Query: 273 WKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
            ++   L   + +      YE +  P++L    W+ SGH+ +Y+ NM+  +       D 
Sbjct: 237 ARLRSKLEHMLYKIHRLRGYEPVRGPELLKADAWKISGHYANYKENMYFTQI------DE 290

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
           + + +KPMNC GH+ ++   ++SYR+LP++  E+G V+R+E SG LHGL RVR FTQDDA
Sbjct: 291 QEYGIKPMNCVGHIKIYQSDVRSYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFTQDDA 350

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
           H+FC   Q+  + L+I   + ++ K F F   M ++ST+PEK +G D +W+ A   +K  
Sbjct: 351 HIFCMPSQIKEQVLEILAFVDNLMKLFDFSYEM-EISTKPEKAIGDDEIWEVATKALKEA 409

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
           LD      +  +  G+  G GAFYGPK +  + DA+ R WQCGTIQVDFNLPSRF   Y 
Sbjct: 410 LD------EQGLKYGIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDFNLPSRFKLEYT 463

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
           +S +EK  PVM+HRA+ GS ERFIGI+ E+  G  P +++P    +  I  + + YA+EI
Sbjct: 464 DSDNEKKQPVMLHRAILGSFERFIGILTEHCAGEFPFFIAPTAVGIVPIGEAHIAYAKEI 523

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
              L   ++  E   +NE+++ KIR    +K+P+I++ GD E ++RS+ +R   +   + 
Sbjct: 524 QKELLELNIDSEVYEKNESLSKKIRIAEKQKLPMILVLGDDEVAKRSVALRDRRAKEQKN 583

Query: 632 VSLLDAIPILTKESL 646
           +SL + I  L KE +
Sbjct: 584 LSLDEFI-KLVKEKM 597


>gi|309789973|ref|ZP_07684549.1| threonyl-tRNA synthetase [Oscillochloris trichoides DG6]
 gi|308227993|gb|EFO81645.1| threonyl-tRNA synthetase [Oscillochloris trichoides DG6]
          Length = 594

 Score =  522 bits (1344), Expect = e-146,   Method: Composition-based stats.
 Identities = 232/596 (38%), Positives = 350/596 (58%), Gaps = 29/596 (4%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D      +RHS AH+MAEAV  I+PE +VAIGP IE GFYYDFD  +  + D+L +IE++
Sbjct: 6   DNDPYYRLRHSLAHVMAEAVLQIFPEGKVAIGPPIEHGFYYDFDLPRALTPDDLGEIERR 65

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIP-----------AKENVTLY 174
           MQ II  + PF+ + +S  +AR++     + YK+E+++ +                ++ Y
Sbjct: 66  MQAIIGGNFPFIYREVSAAEARQI--FANQPYKLELIDGLSKGLDENGETHHGDTVISTY 123

Query: 175 RQGEWFDLCRGPHVRSTGQ-VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQ 233
               + DLCRGPH+  TGQ     FKLM +AGAYWRGD  +  L RIYGTAWN + EL Q
Sbjct: 124 THDTFEDLCRGPHLEHTGQIPNDGFKLMSIAGAYWRGDEKQKQLQRIYGTAWNNKTELEQ 183

Query: 234 YLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDY 291
           +L+ LEE+++RDHRKL +E+ LF  +ED G G+  +  KG  +   +  Y+R  + +  Y
Sbjct: 184 HLHNLEEAKRRDHRKLGKELGLFFFSEDVGPGLPIFTPKGEILRYEMERYVREVQTRYGY 243

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           + + T  V+ + L+ +SGH+++YR +MF      + +     F LKPMNCP H+ +FN  
Sbjct: 244 QHVWTGNVVKEQLYHRSGHYENYRDSMFPPMVESEDL----VFRLKPMNCPSHMTLFNQM 299

Query: 352 -LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
            + SYR+LP+R AEF ++YR E SG+L+GL RVR  TQDD H+FC  +Q+  E     NL
Sbjct: 300 GVISYRDLPMRFAEFATLYRYEDSGALNGLTRVRALTQDDCHIFCRPDQIQEEFSLALNL 359

Query: 411 IISIYKDFGFEKIMVKLSTRPE--KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
           I  +   + F    V+LS R +  K V  D  W+ A + ++  LD       + +     
Sbjct: 360 IREVLSTYHFTDYKVRLSLRGDTGKFVADDEKWEQATSALRAALDA------NGVEYTEE 413

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
            GE AFYGPK +++ +D +GR+WQ  TIQVDF  PSR    Y+   ++   PV++HRAV 
Sbjct: 414 AGEAAFYGPKADFLARDVLGREWQLSTIQVDFIQPSRLGCEYIGEDNQPHTPVVLHRAVT 473

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRN 588
           G+ ERF+G++IE++ G  PLWL+P+QA++  IT   +E AQ +   L +  + +E D   
Sbjct: 474 GTTERFLGVLIEHYAGAFPLWLAPVQAVIIPITDKQMEAAQAVRQRLMAVGMRVEVDSSR 533

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           + +  KIR   ++KIP ++I G+KE    ++ +R         + + D I    +E
Sbjct: 534 DRMQGKIRRAQLQKIPYMLIIGNKELEAGAVAVRLRSGEDLGAIPVDDFIARAQEE 589


>gi|88597312|ref|ZP_01100547.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 84-25]
 gi|218561885|ref|YP_002343664.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|73919778|sp|Q9PIS3|SYT_CAMJE RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|88190373|gb|EAQ94347.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 84-25]
 gi|112359591|emb|CAL34375.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|284925497|gb|ADC27849.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           IA3902]
 gi|315928137|gb|EFV07455.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           DFVF1099]
          Length = 602

 Score =  522 bits (1344), Expect = e-146,   Method: Composition-based stats.
 Identities = 245/615 (39%), Positives = 370/615 (60%), Gaps = 20/615 (3%)

Query: 34  LAKKAVAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQ 93
           + K+ +A   N  + D          EI       SL VIRHSCAH+MA+A++S++PE +
Sbjct: 1   MEKEVIAYLDNETIIDSQSVKNTNLKEIYFDNSKESLEVIRHSCAHLMAQAIKSLYPEAK 60

Query: 94  VAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESK 153
             +GP+IEDGFYYDF  E     ++L +IEKKM+E+        K  ++  +A    + +
Sbjct: 61  FFVGPVIEDGFYYDFRVESKIGEEDLVKIEKKMKELAEAKIEISKYEITKSEALA--KFQ 118

Query: 154 KEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSN 213
            +  K E+L  IP    V++Y+QGE+ DLCRGPHV +T  ++ FFKL +VAGAY  GD  
Sbjct: 119 NDDLKQEVLLRIP-DRAVSIYKQGEFEDLCRGPHVPNTKFLR-FFKLTRVAGAYLGGDEK 176

Query: 214 RPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKG 272
           R ML+RIYGTA+  ++ L +YL  +EE++KRDHRKL  E+ LF   ++ G G+  W   G
Sbjct: 177 REMLTRIYGTAFADKESLKEYLTIIEEAKKRDHRKLGTELKLFTFDDEIGGGLPIWLSNG 236

Query: 273 WKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
            ++   L   + +      YE +  P++L    W+ SGH+ +Y+ NM+  +       D 
Sbjct: 237 ARLRSKLEHMLYKIHRLRGYEPVRGPELLKADAWKISGHYANYKENMYFTQI------DE 290

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
           + + +KPMNC GH+ ++   ++SYR+LP++  E+G V+R+E SG LHGL RVR FTQDDA
Sbjct: 291 QEYGIKPMNCVGHIKIYQSDVRSYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFTQDDA 350

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
           H+FC   Q+  + L+I   + ++ K F F   M ++ST+PEK +G D +W+ A   +K  
Sbjct: 351 HIFCMPSQIKEQVLEILAFVDNLMKLFDFSYEM-EISTKPEKAIGDDEIWEIATKALKEA 409

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
           LD      +  +  G+  G GAFYGPK +  + DA+ R WQCGTIQVDFNLPSRF   Y 
Sbjct: 410 LD------EQGLKYGIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDFNLPSRFKLEYT 463

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
           +S +EK  PVM+HRA+ GS ERFIGI+ E+  G  P +++P    +  I  + + YA+EI
Sbjct: 464 DSDNEKKQPVMLHRAILGSFERFIGILTEHCAGEFPFFIAPTAVGIVPIGEAHIAYAKEI 523

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
              L   ++  E   +NE+++ KIR    +K+P+I++ GD E ++RS+ +R   +   + 
Sbjct: 524 QKELLELNIDSEVYEKNESLSKKIRIAEKQKLPMILVLGDDEVAKRSVALRDRRAKEQKN 583

Query: 632 VSLLDAIPILTKESL 646
           +SL + I  L KE +
Sbjct: 584 LSLDEFI-KLVKEKM 597


>gi|86153772|ref|ZP_01071975.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           HB93-13]
 gi|85842733|gb|EAQ59945.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           HB93-13]
          Length = 602

 Score =  522 bits (1343), Expect = e-146,   Method: Composition-based stats.
 Identities = 246/615 (40%), Positives = 371/615 (60%), Gaps = 20/615 (3%)

Query: 34  LAKKAVAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQ 93
           + K+ +A   N  + D          EI       SL VIRHSCAH+MA+A++S++PE +
Sbjct: 1   MEKEVIAYLDNETIIDSQSVKNTNLKEIYFDNSKESLEVIRHSCAHLMAQAIKSLYPEAK 60

Query: 94  VAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESK 153
             +GP+IEDGFYYDF  E     ++L +IEKKM+E+       LK  ++  +A    + +
Sbjct: 61  FFVGPVIEDGFYYDFRVESKIGEEDLVKIEKKMKELAEAKIEILKYEITKNEALA--KFQ 118

Query: 154 KEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSN 213
            +  K E+L  IP    V++Y+QGE+ DLCRGPHV +T  ++ FFKL +VAGAY  GD  
Sbjct: 119 NDDLKQEVLLRIPDGA-VSIYKQGEFEDLCRGPHVPNTKFLR-FFKLTRVAGAYLGGDEK 176

Query: 214 RPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKG 272
           R ML+RIYGTA+  ++ L +YL  +EE++KRDHRKL  E+ LF   ++ G G+  W   G
Sbjct: 177 REMLTRIYGTAFADKESLKEYLTIIEEAKKRDHRKLGTELKLFTFDDEIGGGLPIWLSNG 236

Query: 273 WKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
            ++   L   + +      YE +  P++L    W+ SGH+ +Y+ NM+  +       D 
Sbjct: 237 ARLRSKLEHMLYKIHRLRGYEPVRGPELLKADAWKISGHYANYKENMYFTQI------DE 290

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
           + + +KPMNC GH+ ++   ++SYR+LP++  E+G V+R+E SG LHGL RVR FTQDDA
Sbjct: 291 QEYGIKPMNCVGHIKIYQSDVRSYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFTQDDA 350

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
           H+FC   Q+  + L+I   + ++ K F F   M ++ST+PEK +G D +W+ A   +K  
Sbjct: 351 HIFCMPSQIKEQVLEILAFVDNLMKLFDFSYEM-EISTKPEKAIGDDEIWEIATKALKEA 409

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
           LD      +  +  G+  G GAFYGPK +  + DA+ R WQCGTIQVDFNLPSRF   Y 
Sbjct: 410 LD------KQGLKYGIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDFNLPSRFKLEYT 463

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
           +S +EK  PVM+HRA+ GS ERFIGI+ E+  G  P +++P    +  I  + + YA+EI
Sbjct: 464 DSDNEKKQPVMLHRAILGSFERFIGILTEHCAGEFPFFIAPTAVGIVPIGEAHIAYAKEI 523

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
              L   ++  E   +NE+++ KIR    +K+P+I++ GD E ++RS+ +R   +   + 
Sbjct: 524 QKELLELNIDSEVYEKNESLSKKIRIAEKQKLPMILVLGDDEVAKRSVALRDRRAKEQKN 583

Query: 632 VSLLDAIPILTKESL 646
           +SL + I  L KE +
Sbjct: 584 LSLDEFI-KLVKEKM 597


>gi|28572657|ref|NP_789437.1| threonyl-tRNA synthetase [Tropheryma whipplei TW08/27]
 gi|73919841|sp|Q83HM3|SYT_TROW8 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|28410789|emb|CAD67175.1| threonyl-tRNA synthetase [Tropheryma whipplei TW08/27]
          Length = 640

 Score =  522 bits (1343), Expect = e-145,   Method: Composition-based stats.
 Identities = 235/611 (38%), Positives = 361/611 (59%), Gaps = 23/611 (3%)

Query: 37  KAVAVAINGKVCDLSDPVREGSI-EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVA 95
             VA+  + ++ DLS+ +  G + E I  + PR L ++RHSCAH++A+AVQSI+ + ++ 
Sbjct: 12  DVVAMICDDRLLDLSESIPSGKVPEPIELDSPRGLDILRHSCAHVLAQAVQSIYGDAKLG 71

Query: 96  IGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKE 155
           IGP  E+GFYYDF   +PFSSD L  IE KM+EI+  D  F+++ +  + A    + + E
Sbjct: 72  IGPFTENGFYYDFSVNEPFSSDSLRVIEDKMREIVHSDQKFVRKVVDRQSA--HSQFRDE 129

Query: 156 AYKVEILESIPAKENVTLYRQGE-------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYW 208
            +K+EI+      + +++Y   +       W D CRGPH+ ST  +   F L  V+  YW
Sbjct: 130 PFKLEIIN--ATDDTLSIYYNIDADSGSVRWMDFCRGPHLPSTRFIGDAFALTHVSSVYW 187

Query: 209 RGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIF 267
           RG+S+ P + R+YGTAW + ++L  YL  +E ++  DHRKL +E+DLF + ++ G G+  
Sbjct: 188 RGNSDNPQMQRVYGTAWGSAKDLKGYLDRVELAKLVDHRKLGKELDLFSLPDEIGPGLAL 247

Query: 268 WHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD- 325
           +H KG  I   +  Y R R +++ Y  + +P +  + L+++SGH   Y  +MF     D 
Sbjct: 248 FHVKGGIIRSEMEQYARLRHLEEGYNFVYSPHITKRDLFERSGHLQWYGQSMFPPMRLDK 307

Query: 326 DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRG 385
           D+      + LKPMNCP H  VF+   +SYR+LP+RLAEFG+VYR E SG++HGL RVRG
Sbjct: 308 DSCSQGFDYYLKPMNCPFHSLVFSSQPRSYRQLPLRLAEFGTVYRYEQSGAIHGLARVRG 367

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE--KRVGSDALWDD 443
            TQDDAH++ T+E   +E  K     IS+  D+G ++  +++STR    K +GSD  W  
Sbjct: 368 LTQDDAHIYATRESFEDEVSKALQFTISLLGDYGLDQFYIEISTRDASGKFLGSDEDWAY 427

Query: 444 AENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLP 503
           A +I++ V       ++D        G  AFYGPK     KDAIGR WQ  TIQ+DFNLP
Sbjct: 428 ATHILQKVAQDSGLQTRD------DPGGAAFYGPKISVQAKDAIGRYWQMSTIQLDFNLP 481

Query: 504 SRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSS 563
            RF  FY +   E+  P+M+HRA+FGS ERF  ++ E++ G  P WLSP Q +   +TS+
Sbjct: 482 ERFGLFYTDRAGERKRPIMVHRALFGSFERFFAVLTEHYAGAFPPWLSPEQVVALPVTSA 541

Query: 564 AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRR 623
            + Y +E  +   S  +    D+  + +  KIR +  +KIP +++ GD++ + R++ IR 
Sbjct: 542 HIPYLEEFVSRFSSRLIRARVDYMQDRLPKKIRSYVKEKIPFVLVAGDRDLTNRTVAIRF 601

Query: 624 FGSTTTQKVSL 634
              T    + +
Sbjct: 602 RDGTQISDLPI 612


>gi|254456980|ref|ZP_05070408.1| threonyl-tRNA synthetase [Campylobacterales bacterium GD 1]
 gi|207085772|gb|EDZ63056.1| threonyl-tRNA synthetase [Campylobacterales bacterium GD 1]
          Length = 602

 Score =  521 bits (1342), Expect = e-145,   Method: Composition-based stats.
 Identities = 238/611 (38%), Positives = 371/611 (60%), Gaps = 23/611 (3%)

Query: 37  KAVAVAINGKVCDLSDPVR---EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQ 93
            A+A+  NG++ DL        EG  +I       SL V+RHS AH+MA+AV+S++P+ +
Sbjct: 2   NAIAIKHNGEIIDLQTAKELGFEGE-QIHLDNSSDSLEVLRHSTAHLMAQAVKSLYPDAK 60

Query: 94  VAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESK 153
             +GP +++GFYYDF  E      +L  IEK+M     +     K  +S ++A+E  + K
Sbjct: 61  FYVGPTVKEGFYYDFKTESEVGEGDLKNIEKQMLSFAKKKYEIEKYEISMDEAKE--KFK 118

Query: 154 KEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSN 213
            +  K+ ++E IP    VT+Y+QGE+ DLCRGPH+ + G ++ F KL+K+AGAY  GDS 
Sbjct: 119 DDHLKLSVMERIPGD-RVTIYKQGEFEDLCRGPHLPNIGLIRYF-KLLKIAGAYLGGDSK 176

Query: 214 RPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKG 272
             +L+RIYG A+  ++ L+ ++  L E+EKRDHRK+  EM+LF   E+   G   W   G
Sbjct: 177 NEVLTRIYGIAFADKESLSAHMTMLAEAEKRDHRKIGNEMNLFTFREEVGAGFPIWLPAG 236

Query: 273 WKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
            ++   L S + +   K  YE +  P++L   LW+ SGH+ +Y  NM+  K       D 
Sbjct: 237 GRLRARLESLLYKAHRKRGYEPVRGPEMLRSDLWKTSGHYQNYGENMYFTKI------DD 290

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
             F +KPMNC GH+ V+   L+SYR+LP++  E+G V+R+E +G+LHGL RVR FTQDDA
Sbjct: 291 IEFGVKPMNCVGHIKVYEDELRSYRDLPIKYFEYGVVHRHEFTGALHGLFRVREFTQDDA 350

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
           H+FCT EQ+  + +++ + +  I   F F+  M+ +ST+PEK VGSD +W+ +   +K  
Sbjct: 351 HIFCTSEQIEEQIIEVVDFVDKIMSTFEFDYKMM-VSTKPEKAVGSDEVWEVSTQALKNA 409

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
           +D      ++ +   +  G GAFYGPK +  + DAIGR+WQCGTIQ+DFNLP RF   Y 
Sbjct: 410 MD------KNNLPYEIDEGGGAFYGPKIDIKITDAIGREWQCGTIQLDFNLPERFELEYN 463

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
             ++EK  PVMIHRA+ GS ERFIGI+ E++ G  P++++P Q  +  I  +   YA+E+
Sbjct: 464 GENNEKIQPVMIHRAILGSFERFIGILTEHYAGEFPMFIAPTQVAIVPIADTHHGYAKEL 523

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
           A+ L   +   E   +N+++N +IR     ++P+++I GD+E   R++ IR   +     
Sbjct: 524 ADKLIDINADSEIYSKNDSLNKRIRTAEKTRVPMLVIIGDEEVEGRTVAIRDRRTREQYN 583

Query: 632 VSLLDAIPILT 642
           +S  + + ++ 
Sbjct: 584 LSEDEFLKLIQ 594


>gi|283769478|ref|ZP_06342374.1| threonine--tRNA ligase [Bulleidia extructa W1219]
 gi|283103746|gb|EFC05132.1| threonine--tRNA ligase [Bulleidia extructa W1219]
          Length = 584

 Score =  521 bits (1341), Expect = e-145,   Method: Composition-based stats.
 Identities = 219/590 (37%), Positives = 349/590 (59%), Gaps = 22/590 (3%)

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
             ++   L V+ HSCAH++A+AV+ ++P+ +  +GP++E+GFYYD D  ++    +++ +
Sbjct: 2   NFKENPELEVLNHSCAHLLAQAVKHLYPQAKFWVGPVVEEGFYYDIDLGDEVIRDEDIPK 61

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK+M++    +   ++  +S  +A  L + + + YKV+++  +P   N+++Y QG++ D
Sbjct: 62  IEKEMKKCAKDNKRIIRHEISRAEA--LQQFQDDPYKVDLINRMPEDTNISMYSQGDFTD 119

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV ST  +K F  L    GAYW+GD N  +L RIYG  + T  EL  YL  LEE+
Sbjct: 120 LCRGPHVESTKLLKNFKLLKHS-GAYWKGDKNNKVLQRIYGVCFPTDTELEAYLQVLEEA 178

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQV 299
           ++RDHRKL +++ +F  +E  GSG+  W   G+ + + L  Y+  K     YE + TP V
Sbjct: 179 KERDHRKLGKDLKMFLFSETVGSGLPMWLPNGFTVRRLLSDYIMEKEIALGYEHVLTPSV 238

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L++ SGH   Y+ +MF +       +D  ++ L+PMNCP H+ ++   L SYR+LP
Sbjct: 239 ASTKLYEVSGHLAHYQEDMFPIME-----RDGDSYVLRPMNCPEHMIIYKASLHSYRDLP 293

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           VR+AE    +R E SG+L G+ R R FTQ+D+H+F   +Q+  E   +  LI+ +Y DFG
Sbjct: 294 VRIAEIAHDFRFEASGALTGIERSRSFTQNDSHIFLRPDQIAEEIKNVTKLILDVYNDFG 353

Query: 420 FEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           F+    +LS R     +K  G+D LW  +EN ++ VL  +K      +      GE AFY
Sbjct: 354 FKDYSFRLSLRDLNNTDKYFGNDDLWTRSENELREVLKEMK------VPYYEAEGEAAFY 407

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +K A+G D    TIQ+D+ LP RF   YVN  ++K  PV+IHRA+ GS++RF+
Sbjct: 408 GPKIDVQVKSALGHDVTLSTIQLDYQLPERFELEYVNKDNQKVRPVVIHRAILGSLDRFV 467

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTI-TSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             ++E  KG LPLWL+P+Q  V  + + +  +YA +I   LK   +    D RNE + Y+
Sbjct: 468 AFLLEETKGVLPLWLAPLQVEVIPVNSEAHGDYASKINRALKREGIRSHLDDRNEKLGYR 527

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IRE  + K+PI I+ G+++    ++ +R +GS      S  D +  L ++
Sbjct: 528 IREAQMNKVPIQIVVGNRDIENETVTVRTYGSKEEVTHSFKDYLNQLVEQ 577


>gi|147835149|emb|CAN65674.1| hypothetical protein VITISV_002009 [Vitis vinifera]
          Length = 1260

 Score =  520 bits (1340), Expect = e-145,   Method: Composition-based stats.
 Identities = 242/567 (42%), Positives = 349/567 (61%), Gaps = 34/567 (5%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSD 117
            I + T E    L  IRH+CAH+MA AVQ ++P+ +V IGP IE+GFYYDFD E P +  
Sbjct: 94  KIVLPTNESSERLLRIRHTCAHVMAMAVQKLFPDAKVTIGPWIENGFYYDFDME-PLTDK 152

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +L +I+K+M  II R+ P +++ +S ++A+    +  E YK+EIL+SI        +  G
Sbjct: 153 DLKRIKKEMDRIIGRNLPLIREEVSRDEAQRRIMAVNEPYKMEILDSIQEDPITXYHIGG 212

Query: 178 EWFDLCRGPHVRSTGQVKK--FFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
           EW+DLC GPHV  TG +      +L  VAGAYWRGD  + ML RIYGTAW  +++L  YL
Sbjct: 213 EWWDLCAGPHVEYTGNICNRKAVELESVAGAYWRGDEKKQMLQRIYGTAWENEEQLKAYL 272

Query: 236 YFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEE 293
           +F EE+++RDHR+L +++DLF I ++ G G++FWH KG  +   +    ++  I+  Y+ 
Sbjct: 273 HFKEEAKRRDHRRLGQDLDLFSIQDEAGGGLVFWHPKGAIVRHIIEDSWKKIHIEHXYDL 332

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           + TP V    LW+ SGH D YR NM++    +D +     + L+PMNCP H+ ++   L 
Sbjct: 333 LYTPHVARADLWKTSGHLDFYRENMYSQITIEDEL-----YQLRPMNCPYHILIYKRKLH 387

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYR+ P+R+AE G+VY  E SGSLHGL RVRGFTQDDAH+FC ++Q+ +E   + +L   
Sbjct: 388 SYRDFPIRVAELGTVYXYELSGSLHGLFRVRGFTQDDAHIFCLEDQIKDEIRGVLDLTEE 447

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           I   FGF K  V LSTRPEK VG+D +W+ A + ++  LD    S        +  G GA
Sbjct: 448 ILLQFGFSKYEVNLSTRPEKAVGADDIWEKATSALRDALDDKGWS------YRIDEGGGA 501

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  ++DA+GR WQC TIQ                  +K  P+MIHRAV GS+ER
Sbjct: 502 FYGPKIDLKIEDALGRKWQCSTIQA-----------------KKQRPIMIHRAVLGSLER 544

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           F G++IE++ G+ PLWLSPIQA V  +T + +EY  E+ N LK++ +  E     E +  
Sbjct: 545 FFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVTNKLKANGIRAEV-CHGERLPK 603

Query: 594 KIREHSIKKIPIIIICGDKEASERSIG 620
            IR    ++IP++ + G KE   +++ 
Sbjct: 604 LIRNSEKQRIPLMAVVGPKEVETQTVT 630


>gi|227833256|ref|YP_002834963.1| Threonyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
 gi|262184240|ref|ZP_06043661.1| threonyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
 gi|254783518|sp|C3PGS1|SYT_CORA7 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|227454272|gb|ACP33025.1| Threonyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
          Length = 687

 Score =  520 bits (1340), Expect = e-145,   Method: Composition-based stats.
 Identities = 233/666 (34%), Positives = 354/666 (53%), Gaps = 45/666 (6%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVA-INGKVCDLS-DPVREGSIEIITP 64
           +T P G+     V A   +    +     +  V V   +G + DLS  P  +     +  
Sbjct: 15  ITVPAGT----AVGAAMRE--HELPNKGPEAVVVVRGADGTLYDLSHTPDTDAEFTPVAA 68

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
            +    AVIRHSC H+MA+AVQ+ +P  ++ IGP IE+GFY+DF   +PF+ ++L  IEK
Sbjct: 69  CEEDGRAVIRHSCGHVMAQAVQAEFPGTKLGIGPAIENGFYFDFQTAKPFTPEDLKAIEK 128

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESI----PAKENVTLYRQGE-- 178
           +M++II     F +   +  +         E +K+E+++      P  +       G+  
Sbjct: 129 RMKKIIKGGQRFERHVYASTE-EAEAALANEPFKLELVQDKGNVDPDSDEAAEVGAGDLT 187

Query: 179 -------------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAW 225
                        WFDLCRGPHV +T  +  F        AYWRGD  +  L RIYGTA+
Sbjct: 188 HYDNVNPRTGEVEWFDLCRGPHVPTTKYIPAFTLTRSS-AAYWRGDQTKAGLQRIYGTAF 246

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR 284
            +++ L  Y   +EE+EKRDHR+L  E+DLF   ++ GSG   +H  G  +   +  + R
Sbjct: 247 ESKEALESYKTMVEEAEKRDHRRLGAELDLFSFPDEIGSGFPVFHPNGATVRMEMEEHSR 306

Query: 285 R-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTI-------KDLRTFAL 336
           R  I D Y  ++TP +    L+++SGH D Y   MF     D          K  + +  
Sbjct: 307 RRHIADGYSFVSTPHLTKGDLFKKSGHLDFYADGMFPPMQLDGEWDADGYCTKQPQDYYA 366

Query: 337 KPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT 396
           KPMNCP H  +F    +SYRELP+RL EFG+VYR E SG +HGL R RGFTQDD+H++CT
Sbjct: 367 KPMNCPMHNLIFASRGRSYRELPLRLFEFGTVYRYEKSGVIHGLTRARGFTQDDSHIYCT 426

Query: 397 KEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDTI 455
            EQ+  E  K+   IIS+ KD+G +   ++LST+     VGSD +W+ +  I++ V +  
Sbjct: 427 PEQLEEELTKVLEFIISLLKDYGLDDFYLELSTKDPNKYVGSDEIWERSTAILQSVAE-- 484

Query: 456 KNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS 515
               +  +         AFYGPK     +DAIGR WQ  T+Q+DFNLP RF   Y  S  
Sbjct: 485 ----KSGLELVPDPAGAAFYGPKISVQARDAIGRTWQMSTVQLDFNLPERFELEYTASDG 540

Query: 516 EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLL 575
            K  P+MIHRA+FGSIERF G+++E++ G  P WL+P Q +   +  +   + +++   L
Sbjct: 541 SKQRPIMIHRALFGSIERFFGVLLEHYAGAFPAWLAPHQVVGIPVADTFAPHLEKVCAEL 600

Query: 576 KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
           +S  L  + D  ++ +  KIR H+  K+P +++ G+++    ++  R    T    V + 
Sbjct: 601 RSRGLRADVDTSDDRMQKKIRNHTTGKVPFMLLAGERDVEADAVSFRFLDGTQVNGVPVE 660

Query: 636 DAIPIL 641
            A+ ++
Sbjct: 661 AAVNVI 666


>gi|153950997|ref|YP_001397450.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. doylei
           269.97]
 gi|166223330|sp|A7H1S0|SYT_CAMJD RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|152938443|gb|ABS43184.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. doylei
           269.97]
          Length = 602

 Score =  520 bits (1340), Expect = e-145,   Method: Composition-based stats.
 Identities = 246/615 (40%), Positives = 370/615 (60%), Gaps = 20/615 (3%)

Query: 34  LAKKAVAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQ 93
           + K+ +A   N  + D          EI       SL VIRHSCAH+MA+A++S++PE +
Sbjct: 1   MEKEVIAYLDNETIIDSQSVKNTNLKEIYFDNSKESLEVIRHSCAHLMAQAIKSLYPEAK 60

Query: 94  VAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESK 153
             +GP+IEDGFYYDF  E     ++L +IEKKM+E+        K  ++  +A    + +
Sbjct: 61  FFVGPVIEDGFYYDFCVESKIGEEDLVKIEKKMKELAEAKIEISKYKITKNEALA--KFQ 118

Query: 154 KEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSN 213
            +  K E+L  IP    V++Y+QGE+ DLCRGPHV +T  ++ FFKL +VAGAY  GD  
Sbjct: 119 NDDLKQEVLLRIPDGA-VSIYKQGEFEDLCRGPHVPNTKFLR-FFKLTRVAGAYLGGDEK 176

Query: 214 RPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKG 272
           R ML+RIYGTA+  ++ L +YL  +EE++KRDHRKL  E+ LF   ++ G G+  W   G
Sbjct: 177 REMLTRIYGTAFADKESLKEYLAIIEEAKKRDHRKLGIELKLFTFNDEIGGGLPIWLGNG 236

Query: 273 WKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
            ++   L   + +      YE +  P++L    W+ SGH+ +Y+ NM+  +       D 
Sbjct: 237 ARLRSKLEHMLYKIHRLRGYEPVRGPELLKADAWKISGHYANYKENMYFTQI------DE 290

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
           + + +KPMNC GH+ V+   ++SYR+LP++  E+G V+R+E SG LHGL RVR FTQDDA
Sbjct: 291 QEYGIKPMNCVGHIKVYQSDVRSYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFTQDDA 350

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
           H+FC   Q+  + L+I   + ++ K F F   M ++ST+PEK +G D +W+ A   +K  
Sbjct: 351 HIFCMPSQIKEQVLEILAFVDNLMKLFDFSYEM-EISTKPEKAIGDDEIWEVATKALKEA 409

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
           LD      +  +  G+  G GAFYGPK +  + DA+ R WQCGTIQVDFNLPSRF   Y 
Sbjct: 410 LD------EQGLKYGIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDFNLPSRFKLEYT 463

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
           +S +EK  PVM+HRA+ GS ERFIGI+ E+  G  P +++P    +  I  + + YA+EI
Sbjct: 464 DSDNEKKQPVMLHRAILGSFERFIGILTEHCAGEFPFFIAPTAVGIVPIGEAHIAYAKEI 523

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
              L   ++  E   +NE+++ KIR    +K+P+I++ GD E ++RS+ +R   +   + 
Sbjct: 524 QKELLELNIDSEVYEKNESLSKKIRIAEKQKLPMILVLGDDEVAKRSVALRDRRAKEQKN 583

Query: 632 VSLLDAIPILTKESL 646
           +SL + I  L KE +
Sbjct: 584 LSLDEFI-KLVKEKM 597


>gi|28493229|ref|NP_787390.1| threonyl-tRNA synthetase [Tropheryma whipplei str. Twist]
 gi|73919842|sp|Q83GK5|SYT_TROWT RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|28476270|gb|AAO44359.1| threonyl-tRNA synthetase [Tropheryma whipplei str. Twist]
          Length = 640

 Score =  520 bits (1339), Expect = e-145,   Method: Composition-based stats.
 Identities = 234/611 (38%), Positives = 360/611 (58%), Gaps = 23/611 (3%)

Query: 37  KAVAVAINGKVCDLSDPVREGSI-EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVA 95
             VA+  + ++ DLS+ +  G + E I  + P  L ++RHSCAH++A+AVQSI+ + ++ 
Sbjct: 12  DVVAMICDDRLLDLSESIPSGKVPEPIELDSPHGLDILRHSCAHVLAQAVQSIYGDAKLG 71

Query: 96  IGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKE 155
           IGP  E+GFYYDF   +PFSSD L  IE KM+EI+  D  F+++ +  + A    + + E
Sbjct: 72  IGPFTENGFYYDFSVNEPFSSDSLRVIEDKMREIVHSDQKFVRKVVDRQSA--HSQFRDE 129

Query: 156 AYKVEILESIPAKENVTLYRQGE-------WFDLCRGPHVRSTGQVKKFFKLMKVAGAYW 208
            +K+EI+      + +++Y   +       W D CRGPH+ ST  +   F L  V+  YW
Sbjct: 130 PFKLEIIN--ATDDTLSIYYNIDADSGSVRWMDFCRGPHLPSTRFIGDAFALTHVSSVYW 187

Query: 209 RGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIF 267
           RG+S+ P + R+YGTAW + ++L  YL  +E ++  DHRKL +E+DLF + ++ G G+  
Sbjct: 188 RGNSDNPQMQRVYGTAWGSAKDLKGYLDRVELAKLVDHRKLGKELDLFSLPDEIGPGLAL 247

Query: 268 WHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD- 325
           +H KG  I   +  Y R R +++ Y  + +P +  + L+++SGH   Y  +MF     D 
Sbjct: 248 FHVKGGIIRSEMEQYARLRHLEEGYNFVYSPHITKRDLFERSGHLQWYGQSMFPPMRLDK 307

Query: 326 DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRG 385
           D+      + LKPMNCP H  VF+   +SYR+LP+RLAEFG+VYR E SG++HGL RVRG
Sbjct: 308 DSCSQGFDYYLKPMNCPFHSLVFSSQPRSYRQLPLRLAEFGTVYRYEQSGAIHGLARVRG 367

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE--KRVGSDALWDD 443
            TQDDAH++ T+E   +E  K     IS+  D+G ++  +++STR    K +GSD  W  
Sbjct: 368 LTQDDAHIYATRESFEDEVSKALQFTISLLGDYGLDQFYIEISTRDASGKFLGSDEDWAY 427

Query: 444 AENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLP 503
           A +I++ V       ++D        G  AFYGPK     KDAIGR WQ  TIQ+DFNLP
Sbjct: 428 ATHILQKVAQDSGLQTRD------DPGGAAFYGPKISVQAKDAIGRYWQMSTIQLDFNLP 481

Query: 504 SRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSS 563
            RF  FY +   E+  P+M+HRA+FGS ERF  ++ E++ G  P WLSP Q +   +TS+
Sbjct: 482 ERFGLFYTDRAGERKRPIMVHRALFGSFERFFAVLTEHYAGAFPPWLSPEQVVALPVTSA 541

Query: 564 AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRR 623
            + Y +E  +   S  +    D+  + +  KIR +  +KIP +++ GD++ + R++ IR 
Sbjct: 542 HIPYLEEFVSRFSSRLIRARVDYMQDRLPKKIRSYVKEKIPFVLVAGDRDLTNRTVAIRF 601

Query: 624 FGSTTTQKVSL 634
              T    + +
Sbjct: 602 RDGTQISDLPI 612


>gi|159037395|ref|YP_001536648.1| threonyl-tRNA synthetase [Salinispora arenicola CNS-205]
 gi|157916230|gb|ABV97657.1| threonyl-tRNA synthetase [Salinispora arenicola CNS-205]
          Length = 671

 Score =  520 bits (1339), Expect = e-145,   Method: Composition-based stats.
 Identities = 240/623 (38%), Positives = 347/623 (55%), Gaps = 40/623 (6%)

Query: 45  GKVCDLS-DPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG 103
           G++ DL   PV E  +E +  + P  LAV+RHS AH++A+AVQ ++PE ++ IGP IE+G
Sbjct: 46  GQLRDLDWTPVEETVVEPVGIDTPDGLAVLRHSTAHVLAQAVQDLFPEAKLGIGPPIENG 105

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSH-EKARELFESKKEAYKVEIL 162
           FYYDF  ++PF  ++L ++EK+MQEII     F ++   + ++AR   E   E +K+E++
Sbjct: 106 FYYDFAVDRPFQPEDLTKLEKRMQEIIKSGQRFRRRRFRNLDEAR--GELAAEPFKLELI 163

Query: 163 E---SIPAKENVTLYRQGE---------------WFDLCRGPHVRSTGQVKKFFKLMKVA 204
           E          V     GE               W DLCRGPH+ +T  +  F KLM+ A
Sbjct: 164 ELKGDGLDSSQVMEVGGGELTSYDNLAADADKVCWSDLCRGPHLPNTRLIGAF-KLMRSA 222

Query: 205 GAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GS 263
            AYWRG    P L R+YGTAW T+ EL  YL  LEE+ +RDHRKL  ++DLF   E+ GS
Sbjct: 223 AAYWRGSEKNPQLQRVYGTAWPTRDELKAYLRLLEEAARRDHRKLGTDLDLFSFPEEIGS 282

Query: 264 GVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK 322
           G+  +H KG  + +T+  Y+R R I++ ++ + TP +  + L+  SGH   Y   MF   
Sbjct: 283 GLPVFHPKGGVLKRTMEDYVRARHIEEGFDYVGTPHISKEGLFHTSGHLPYYADGMFPPM 342

Query: 323 CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMR 382
                  +   + LK MNCP H  ++    +SYRELP+RL EFGSVYR+E SG +HGL R
Sbjct: 343 HL-----EGADYYLKAMNCPMHNLIYRSRGRSYRELPMRLFEFGSVYRDEKSGVIHGLTR 397

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR----PEKRVGSD 438
           VRGFTQDD+H +CTKEQ   E   +   ++ + +DFG    +++LSTR    P+K VGS 
Sbjct: 398 VRGFTQDDSHSYCTKEQAPAEIKHLLAFVLGLLQDFGITDFVLELSTRDDANPDKFVGSA 457

Query: 439 ALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
             W  A  +++             ++     G  AFYGPK     KDAIGR WQ  TIQ 
Sbjct: 458 EDWATATAVLEQCARDTG------LDLVPDPGGAAFYGPKISVQAKDAIGRTWQMSTIQY 511

Query: 499 DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVT 558
           DFN P+ F   Y  +   +  PVMIH A FGSIERFIG++ E++ G  P WL+P+Q +  
Sbjct: 512 DFNQPAGFGLEYQAADGSRQRPVMIHCAKFGSIERFIGVLTEHYAGAFPAWLAPVQVVGI 571

Query: 559 TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERS 618
            I     EY       L++  +  + D  ++ +  KIR    +KIP + I GD + +  +
Sbjct: 572 PIREDHTEYLDGFVAGLRAAGIRAQVDAGDDRMQKKIRTAQQQKIPFMAIAGDDDVAAGT 631

Query: 619 IGIRRFGSTTTQKVSLLDAIPIL 641
           +  R    +    V + +A+  +
Sbjct: 632 VSFRYRDGSQRNGVPVAEAVSHV 654


>gi|227488772|ref|ZP_03919088.1| threonine--tRNA ligase [Corynebacterium glucuronolyticum ATCC
           51867]
 gi|227542231|ref|ZP_03972280.1| threonine--tRNA ligase [Corynebacterium glucuronolyticum ATCC
           51866]
 gi|227091194|gb|EEI26506.1| threonine--tRNA ligase [Corynebacterium glucuronolyticum ATCC
           51867]
 gi|227182060|gb|EEI63032.1| threonine--tRNA ligase [Corynebacterium glucuronolyticum ATCC
           51866]
          Length = 689

 Score =  520 bits (1339), Expect = e-145,   Method: Composition-based stats.
 Identities = 237/646 (36%), Positives = 352/646 (54%), Gaps = 40/646 (6%)

Query: 29  SISRSLAKKAVAVA-INGKVCDLS-DPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQ 86
            +        V V    G + DLS  P  + ++  +         VIRHS  H+MA+AVQ
Sbjct: 33  DLPSKGPDAVVCVKTAEGDLKDLSFTPEVDTTMTTVIAASDEGRGVIRHSATHVMAQAVQ 92

Query: 87  SIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYL-SHEK 145
           + +P  ++ IGP +E+GFYYDF  E+ F+ ++L +IEK+M++II     F +    S ++
Sbjct: 93  AEFPGTKLGIGPAVENGFYYDFGTERSFTPEDLKKIEKRMKKIIKTGQRFERFAWESLDE 152

Query: 146 ARELFESKKEAYKVEILESIPAKE------------NVTLYR-------QGEWFDLCRGP 186
           AR       E YK+E++E                   +T YR       + EWFDLCRGP
Sbjct: 153 ARTAMAE--EPYKLELIEDKSKGTVLDEAADVDAHGELTGYRNVNPRTNETEWFDLCRGP 210

Query: 187 HVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDH 246
               T +    FKL++ + AYW+GD +R  + RIYGTAW +++ L  YL  LEE+EKRDH
Sbjct: 211 AHVPTTRYIPAFKLLRSSAAYWKGDQSRDGMQRIYGTAWESKEALDDYLTMLEEAEKRDH 270

Query: 247 RKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHL 304
           R+L +E+DLF   ++ GSG   +H  G  I   +  + RR  +++ Y  +NTP +    L
Sbjct: 271 RRLGQELDLFSFPDEIGSGFPVFHPDGGIIRLEMEEHSRRRHLENGYSFVNTPHITKGDL 330

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDL-------RTFALKPMNCPGHVAVFNHGLKSYRE 357
           +Q+SGH D Y   MF     D    +        + +  KPMNCP H  ++    +SYRE
Sbjct: 331 FQKSGHLDFYADGMFPPMQLDGEYDEDGNCTKQPQDYYAKPMNCPMHNLIYASRGRSYRE 390

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+RL EFG+VYR E SG +HGL R RGFTQDDAH++CT+EQ+ +E   + N I+S+ KD
Sbjct: 391 LPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYCTEEQLEDELTGVLNFILSLLKD 450

Query: 418 FGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           +G     ++LST+     VGSD +W+ +  I++ V           +         AFYG
Sbjct: 451 YGLNDFYLELSTKDPNKFVGSDEIWEKSTAILERVAKASG------LELVPDPAGAAFYG 504

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK     +DAIGR WQ  T+Q+DFNLP RF   Y  S   K  P+MIHRA+FGSIERF G
Sbjct: 505 PKISVQARDAIGRTWQMSTVQLDFNLPERFELEYTASDGSKKRPIMIHRALFGSIERFFG 564

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +++E++ G  P WL+P Q     +    V+Y + +   LK+  +  E D  ++ +  KIR
Sbjct: 565 VLLEHYAGAFPAWLAPHQVTGIPVADEFVDYLEGVIGKLKAQGIRAEVDTSDDRMQKKIR 624

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            H+  K+P +++ G ++    ++  R    +    V    A+ I+T
Sbjct: 625 NHTTGKVPFMLLAGARDQEAGAVSFRFLDGSQVNGVPADKAVEIIT 670


>gi|313681237|ref|YP_004058975.1| ser-tRNA(thr) hydrolase; threonyl-tRNA synthetase [Sulfuricurvum
           kujiense DSM 16994]
 gi|313154097|gb|ADR32775.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Sulfuricurvum
           kujiense DSM 16994]
          Length = 602

 Score =  520 bits (1338), Expect = e-145,   Method: Composition-based stats.
 Identities = 239/611 (39%), Positives = 366/611 (59%), Gaps = 21/611 (3%)

Query: 37  KAVAVAINGKVCDLSDP--VREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
             +A+  N ++ DL     +     EI     P +L VIRHSCAH+MAEA+++++ + + 
Sbjct: 2   DIIAIKHNDQIVDLQTAGALGITGEEIAYDNSPDALEVIRHSCAHLMAEAIKALYTDAKF 61

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            +GP +++GFYYDF   +    D+L  IEKKM +I        +  ++  +AR   +   
Sbjct: 62  FVGPTVKEGFYYDFKVNETIGEDDLKTIEKKMLDIAKGKEKIERYEITKNEARA--KFAN 119

Query: 155 EAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNR 214
           +  K  +++ IP+   VT+Y+QGE+ DLCRGPH+ S G ++ F KL K++GAY  GDS  
Sbjct: 120 DHLKQAVMDRIPSD-TVTIYKQGEFEDLCRGPHLPSVGLLRYF-KLTKISGAYLGGDSKN 177

Query: 215 PMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGW 273
            ML+RIYG A+  ++ L  YL  + E+EKRDHRK+  EM LF   E+   G   W   G 
Sbjct: 178 EMLTRIYGIAFADKESLKAYLDQMAEAEKRDHRKIGAEMKLFTFREEVGAGFPIWLPAGA 237

Query: 274 KIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           ++   L   + +   K  YE +  P++L   LW+ SGH+ +Y  NM+       T  D  
Sbjct: 238 RMRSRLEQLLFKAHRKRGYEPVRGPEMLRSDLWKVSGHYQNYGENMYF------THIDEL 291

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
            F +KPMNC GH+ V+ H L SYR+LP++  E+G V+R+E +G+LHGL RVR FTQDDAH
Sbjct: 292 EFGVKPMNCVGHIKVYEHDLHSYRDLPLKYFEYGVVHRHEMTGALHGLFRVREFTQDDAH 351

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
           +FCT +Q+  + +++ + +  I K F F   M+ +ST+PEK VG DA+W+ + N +K  +
Sbjct: 352 IFCTADQIEQQIIEVVDFVDKIMKTFEFNYKMM-ISTKPEKAVGDDAVWEISTNALKTAM 410

Query: 453 DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
           D      ++ ++  +  G GAFYGPK +  + DAIGR+WQCGTIQ+DFNLP+RF   Y  
Sbjct: 411 D------KNNLSYEIDEGGGAFYGPKIDIKITDAIGREWQCGTIQLDFNLPARFELEYNG 464

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIA 572
             + K  PVMIHRA+ GS ERF+GI+ E++ G  P++++P Q  +  I  +   YA+E+A
Sbjct: 465 EENAKIQPVMIHRAILGSFERFVGILTEHYAGEFPMFIAPTQVAIVPIAPTHEAYARELA 524

Query: 573 NLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
           + L       E   +NE++N +IR     ++P+II+ GD+E + +SI +R   S     +
Sbjct: 525 DKLIDMGADFEIFDKNESLNKRIRTAEKGRVPMIIVLGDEEVANKSIAVRDRRSREQYNL 584

Query: 633 SLLDAIPILTK 643
           S  D I ++ +
Sbjct: 585 SEEDFISLVKQ 595


>gi|294055076|ref|YP_003548734.1| threonyl-tRNA synthetase [Coraliomargarita akajimensis DSM 45221]
 gi|293614409|gb|ADE54564.1| threonyl-tRNA synthetase [Coraliomargarita akajimensis DSM 45221]
          Length = 612

 Score =  520 bits (1338), Expect = e-145,   Method: Composition-based stats.
 Identities = 229/614 (37%), Positives = 355/614 (57%), Gaps = 37/614 (6%)

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +D   L  +RHSC+H++A AV  + P+ Q+ IGP  ++GFYYD D ++   + +L  IE
Sbjct: 1   MKDMSPLEELRHSCSHVLAAAVLRLHPDTQLDIGPPTDNGFYYDIDLDKKLDASDLEAIE 60

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEA-YKVEILESIPAKENVTLYRQGEWFDL 182
            +M++II  +  F +   S E+A    +   +  YK+  L+ IP  E V+ Y+ GE+ DL
Sbjct: 61  VEMKQIIKENQKFTRIECSREEAVAKIKEFGQERYKLGRLDDIPEGEQVSFYQNGEFIDL 120

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C G HV  T ++K F KL+ +AGAY RGD N   L RIYGTA+ ++ EL  YL  LE+++
Sbjct: 121 CAGSHVNYTKKIKAF-KLLSIAGAYHRGDENNKQLQRIYGTAFPSKDELADYLDKLEQAK 179

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVL 300
            RDHRKL +E+ LFHI +  GSG++ W   G  +   L +++  +++   Y+++ TP + 
Sbjct: 180 ARDHRKLGKELKLFHIDDSVGSGLVLWSPNGAVVRTELQNFIADELQKSGYDQVFTPHIG 239

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDL-------------------RTFALKPMNC 341
              L++ SGH+  Y+ + F       T+++L                     + LKPMNC
Sbjct: 240 KLGLYRTSGHFPYYKESQFPPIVEPGTVEELAHEGCSCADLSNKLDSGEIDGYLLKPMNC 299

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
           P H+ +F+    SYR+LPVRLAEFG+VYR E SG L+G+ RVRGFTQDDAH+FCT++Q+ 
Sbjct: 300 PMHIKIFDSQPHSYRDLPVRLAEFGTVYRWEQSGELNGMTRVRGFTQDDAHLFCTEDQIA 359

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEK---RVGSDALWDDAENIMKGVLDTIKNS 458
            E     +L+  ++   G  +  V++  R       VG  A WD AE+ ++    T+   
Sbjct: 360 EEIAGCLDLVKLVFNTLGMTEYRVRIGLRDPDASKYVGDPAKWDAAEDALRSAAQTLG-- 417

Query: 459 SQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC 518
               ++     GE AFYGPK ++++KD IGR+WQ GT+QVD+NLP RF+  Y+ + +EK 
Sbjct: 418 ----VDYTEEPGEAAFYGPKIDFVVKDVIGREWQLGTVQVDYNLPERFDLNYIGADNEKH 473

Query: 519 HPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSH 578
            PVM+HRA FGS+ERF G++IE+F GN P WL+P Q  +  +    V  A+EI  L K+ 
Sbjct: 474 RPVMLHRAPFGSMERFCGVLIEHFAGNFPTWLAPEQVRILPMNDDLVPQAREIEKLFKAA 533

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS----- 633
            + +  D   + +  KIR+  + K+P  ++ G KEA +  I +    +   + +      
Sbjct: 534 KIRVTVDAIADKLGAKIRKCHVDKVPHFLVLGRKEAEDGLIKVNSRANKALEGLKTPSEF 593

Query: 634 LLDAIPILTKESLP 647
           L + +  +  ++LP
Sbjct: 594 LSELLENIANKTLP 607


>gi|156740370|ref|YP_001430499.1| threonyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
 gi|156231698|gb|ABU56481.1| threonyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
          Length = 595

 Score =  520 bits (1338), Expect = e-145,   Method: Composition-based stats.
 Identities = 235/590 (39%), Positives = 352/590 (59%), Gaps = 30/590 (5%)

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIAR 132
           +RHS AH+MA+AV  ++PE ++AIGP IEDGFYYDFD  +P + D+L +IEK+M+ IIA 
Sbjct: 13  LRHSAAHVMAQAVLELFPEGKIAIGPPIEDGFYYDFDLPRPLTPDDLEEIEKRMRRIIAG 72

Query: 133 DSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-----------VTLYRQGEWFD 181
             PF+ + +  ++AR L   + + YK+E+++ +   ++           ++ YR   + D
Sbjct: 73  KHPFVYRVVDPDEARAL--FRDQPYKLELIDGLLHGQDEYGEQGSTNTVISTYRHDTFED 130

Query: 182 LCRGPHVRSTGQ-VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           LCRGPH+  TGQ     FKLM VAGAYWRGDSNRPML RIYGTAWN+++EL  YL+ LEE
Sbjct: 131 LCRGPHLEHTGQIPPDAFKLMSVAGAYWRGDSNRPMLQRIYGTAWNSKEELDAYLHRLEE 190

Query: 241 SEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           +++RDHR++ +E+ LF+ +ED G G+  +  KG  +   + SY+R  + +  Y+ + T  
Sbjct: 191 AKRRDHRRIGKELGLFYFSEDIGPGLPLFTPKGEMLRHLMESYVREVQTRYGYQHVWTGH 250

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG-LKSYRE 357
           ++ + L+++SGH+++YR NMF     D    +   + LKPMNCP H+ ++    + SYR+
Sbjct: 251 IVKETLYKKSGHYEAYRENMFPPMIED----EEHVYRLKPMNCPSHMTLYKEMGIHSYRD 306

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R AEF ++YR E  G+L GL RVR  TQDD H+FC  +Q+  E      LI  + + 
Sbjct: 307 LPLRFAEFATLYRYEERGTLTGLTRVRALTQDDCHIFCRPDQIEEEFGLALRLIREVLET 366

Query: 418 FGFEKIMVKLSTRPE--KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           + F    V+LS R E  K +  D  WD AE  ++  LD         +      GE A Y
Sbjct: 367 YRFTNYRVRLSLRGEGGKYIADDEAWDLAERALRTALDH------YSVQYEEAPGEAAIY 420

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +++  D +GR+WQ  TIQVDF  P R    Y+    +   PV++HRAV G+ ERF+
Sbjct: 421 GPKADFLAHDVLGREWQLSTIQVDFIQPRRLGLEYIAEDGQPRTPVVLHRAVTGTTERFM 480

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYK 594
           G++IE+F G  PLWL+P+QA+V  I+      YA ++   L +  L +E D   E +  K
Sbjct: 481 GVLIEHFAGAFPLWLAPVQAVVIPISDERHGAYAADVGRQLTAAGLRVEVDLSRERMQAK 540

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IR+  ++KIP ++I GD+E    ++ +R         V +   I     E
Sbjct: 541 IRQAQLQKIPYMLIIGDREQHAGAVAVRCRSGEDLGAVPVAAFIARARAE 590


>gi|315453307|ref|YP_004073577.1| threonyl-tRNA synthetase [Helicobacter felis ATCC 49179]
 gi|315132359|emb|CBY82987.1| threonyl-tRNA synthetase [Helicobacter felis ATCC 49179]
          Length = 612

 Score =  520 bits (1338), Expect = e-145,   Method: Composition-based stats.
 Identities = 232/592 (39%), Positives = 363/592 (61%), Gaps = 20/592 (3%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSS 116
           G+  I+  E   +L ++RHSCAH+MA+A+  ++P+ Q  +GP++E+GFYYDF  +   S 
Sbjct: 34  GAQAILFGESQEALEILRHSCAHLMAQAIAQLYPDAQFFVGPVVEEGFYYDFKTQTKISE 93

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
           ++LA+IE +M EI  R  P  K Y S ++A++ F+   ++ K  ++ +IP  + +++Y Q
Sbjct: 94  EDLARIEARMLEIAKRAHPITKSYCSRQEAQQRFK--NDSLKRAVMANIP-DDKLSIYAQ 150

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           GE+ DLCRGPH+ +T  ++ F KL K+AGAY  GD+++ ML RIYG A+ T+Q L  YL 
Sbjct: 151 GEFEDLCRGPHLPNTKFLQHF-KLTKLAGAYLGGDASQEMLQRIYGIAFATKQSLKDYLT 209

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEI 294
            LEE++KRDHRKL +E+ LF   E+   G+  W   G ++ + +   +    ++  YE +
Sbjct: 210 QLEEAKKRDHRKLGQELGLFRFDEEVGAGLPIWLPNGMRLRKRIEDLLSVALLRSGYEPV 269

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
             P++L   LW+ SGH+++Y+ NM+       T  D   + +KPMNC GH+ V+ H L+S
Sbjct: 270 RGPEILKSSLWKISGHYENYKENMYF------TTIDEVEYGIKPMNCVGHIKVYQHALRS 323

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YR+LP+R  E+G V+R+E SG LHGL+RVR FTQDDAH+FC  +Q+  E   I      +
Sbjct: 324 YRDLPLRFYEYGVVHRHEQSGVLHGLLRVREFTQDDAHIFCRFDQIKAEVQAILAFTKRV 383

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
              FGF+  M +LST+P K +GSD +W+ A + +K  L+      +  +   V  G GAF
Sbjct: 384 MGAFGFDYEM-ELSTKPTKYIGSDEVWEQATSALKEALE------EQGVPFKVDEGGGAF 436

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  + DAI R WQCGT+QVD NLP+RF+  Y +       PVMIHRA+ GS ERF
Sbjct: 437 YGPKIDIKITDAIRRKWQCGTVQVDMNLPARFHLSYASEQDSPEMPVMIHRAILGSFERF 496

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
           I ++ E++ GN P +++P+Q  +  I++   +YAQ++   L+   +  E   +NE++  +
Sbjct: 497 IAVLTEHYGGNFPFFIAPVQVALVPISADQHDYAQDLCTQLRHAGIFAEVANKNESLAKR 556

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           IR    +K+P+I + G KE  E ++ IR         +   + I  + +E +
Sbjct: 557 IRTLEKQKVPLIAVIGAKETQENALAIRDRALGEQYTMDSKEFIN-MCQEKM 607


>gi|168334535|ref|ZP_02692696.1| threonyl-tRNA synthetase [Epulopiscium sp. 'N.t. morphotype B']
          Length = 635

 Score =  519 bits (1337), Expect = e-145,   Method: Composition-based stats.
 Identities = 220/611 (36%), Positives = 340/611 (55%), Gaps = 25/611 (4%)

Query: 41  VAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII 100
             + G +  ++  + +G++         S     H+ +H++A AV++++P + +AIGP I
Sbjct: 27  AFVKGDI--MNIYLEDGTVAAF----EDSKHTFWHTASHVLAHAVKNLYPTISLAIGPAI 80

Query: 101 EDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVE 160
           ++GFYYDFD E+ FS +ELA+IE +M++I+    P +K  L  +KA EL +   E YK+E
Sbjct: 81  DNGFYYDFDAEKHFSDEELAKIEAEMKKIVKAKHPIVKFALPKDKALELMK--DEPYKIE 138

Query: 161 ILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRI 220
           ++  +PA   +T Y+QG++ DLC GPH+ +T QV+ F KL   AGAYWRG+    ML RI
Sbjct: 139 LINELPADAEITFYKQGDFVDLCAGPHLSNTKQVEAF-KLTSCAGAYWRGNEKNKMLYRI 197

Query: 221 YGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTL 279
           YGTA+  +  LT+YL  +EE++KRDH KL RE+ LF   E    G+     KG K+ QTL
Sbjct: 198 YGTAFPKKAMLTEYLAAVEEAKKRDHNKLGRELKLFATDETVGQGLPLIMPKGAKVIQTL 257

Query: 280 ISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKP 338
             ++   + ++ Y    TP +    L++ SGHW  Y+  MF +    +  KD    AL+P
Sbjct: 258 QRWIEDLEEENGYLLTKTPNMAKNDLYKISGHWSHYKDGMFVM---GNEEKDDEIIALRP 314

Query: 339 MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE 398
           M CP    ++     SYR+LP+R AE  ++ RNE SG +HGL+RVR FT  D H+ CT +
Sbjct: 315 MTCPFQFMIYKQEQHSYRDLPIRYAETATLARNESSGEMHGLIRVRQFTLADGHIVCTPD 374

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLSTR-----PEKRVGSDALWDDAENIMKGVLD 453
           Q+  E   + +LI  I K  G +K +    ++      EK + +   W+  E IMK +LD
Sbjct: 375 QLETEFKNVVDLIKYIMKTLGIDKDISYRFSKWSPEFKEKYIDNPEAWETTETIMKNILD 434

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS 513
            +K      I+      E AFYGPK +   K+  G++    T+Q+DF L  RFN  YV++
Sbjct: 435 HLK------IDYKEAENEAAFYGPKLDVQFKNVHGKEDTIITVQIDFALAERFNMTYVDA 488

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIAN 573
             EK  P +IHR+  G  ER + ++IE + G  P WL+P    +  I+    +YA E+A 
Sbjct: 489 DGEKKLPYIIHRSSLGCYERTLAMLIEKYAGAFPTWLAPTAVKILPISDKYADYAAEVAA 548

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            L+ + + +E D R E I YKIRE   +++P I++ G  E   +++ +R          +
Sbjct: 549 TLRKNKILVEIDQRTEKIGYKIREARNERVPYIVVVGADEMENKTVSVRSRQKGEEGVFA 608

Query: 634 LLDAIPILTKE 644
           L      +  E
Sbjct: 609 LDVFAQRVADE 619


>gi|86151198|ref|ZP_01069413.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|85841545|gb|EAQ58792.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           260.94]
          Length = 602

 Score =  519 bits (1337), Expect = e-145,   Method: Composition-based stats.
 Identities = 245/615 (39%), Positives = 370/615 (60%), Gaps = 20/615 (3%)

Query: 34  LAKKAVAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQ 93
           + K+ +A   N  + D          EI       SL VIRHSCAH+MA+A++S++PE +
Sbjct: 1   MEKEVIAYLDNETIIDSQSVKNTNLKEIYFDNSKESLEVIRHSCAHLMAQAIKSLYPEAK 60

Query: 94  VAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESK 153
             +GP+IEDGFYYDF  E     ++L +IEKKM+E+       LK  ++  +A    + +
Sbjct: 61  FFVGPVIEDGFYYDFRVESKIGEEDLVKIEKKMKELAEAKIEILKYEITKNEALA--KFQ 118

Query: 154 KEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSN 213
            +  K E+L  IP    V++Y+QGE+ DLCRGPHV +T  ++ FFKL +VAGAY  GD  
Sbjct: 119 NDDLKQEVLLRIPDGA-VSIYKQGEFEDLCRGPHVPNTKFLR-FFKLTRVAGAYLGGDEK 176

Query: 214 RPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKG 272
           R ML+RIYGTA+  ++ L +YL  +EE++KRDHRKL  E+ LF   ++ G G+  W   G
Sbjct: 177 REMLTRIYGTAFADKESLKEYLTIIEEAKKRDHRKLGTELKLFTFDDEIGGGLPIWLSNG 236

Query: 273 WKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
            ++   L   + +      YE +  P++L    W+ SGH+ +Y+ NM+  +       D 
Sbjct: 237 ARLRSKLEHMLYKIHRLRGYEPVRGPELLKADAWKISGHYANYKENMYFTQI------DE 290

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
           + + +KPMNC GH+ ++   ++SYR+LP++  E+G V+R+E SG LHGL RVR FTQDDA
Sbjct: 291 QEYGIKPMNCVGHIKIYQSDVRSYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFTQDDA 350

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
           H+FC   Q+  + L+I   + ++ K F F   M ++ST+PEK +G D +W+ A   +K  
Sbjct: 351 HIFCMPSQIKEQVLEILAFVDNLMKLFDFSYEM-EISTKPEKAIGDDEIWEIATKALKEA 409

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
           LD      +  +  G+  G GAFYGPK +  + DA+ R WQCGTIQVDFNLPS F   Y 
Sbjct: 410 LD------EQGLKYGIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDFNLPSCFKLEYT 463

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
           +S +EK  PVM+HRA+ GS ERFIGI+ E+  G  P +++P    +  I  + + YA+EI
Sbjct: 464 DSDNEKKQPVMLHRAILGSFERFIGILTEHCAGEFPFFIAPTAVGIVPIGEAHIAYAKEI 523

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
              L   ++  E   +NE+++ KIR    +K+P+I++ GD E ++RS+ +R   +   + 
Sbjct: 524 QKELLELNIDSEVYEKNESLSKKIRIAEKQKLPMILVLGDDEVAKRSVALRDRRAKEQKN 583

Query: 632 VSLLDAIPILTKESL 646
           +SL + I  L KE +
Sbjct: 584 LSLDEFI-KLVKEKM 597


>gi|148675292|gb|EDL07239.1| threonyl-tRNA synthetase-like 2, isoform CRA_b [Mus musculus]
          Length = 559

 Score =  519 bits (1337), Expect = e-145,   Method: Composition-based stats.
 Identities = 209/561 (37%), Positives = 309/561 (55%), Gaps = 20/561 (3%)

Query: 87  SIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEK 145
            ++    +  GP IE+GFYYD   E +  SS EL+ +E   + II    PF +  +S + 
Sbjct: 2   ELYYGGHLCYGPPIENGFYYDMFIEDRVVSSTELSALENICKTIIKEKQPFERLEVSKDT 61

Query: 146 ARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAG 205
             E+F+     +K  IL+        T+YR G   DLC+GPHVR TG++K   K+ K + 
Sbjct: 62  LLEMFKY--NKFKCRILKEKVDTPTTTVYRCGPLIDLCKGPHVRHTGKIK-AIKIFKNSS 118

Query: 206 AYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGV 265
            YW G+     L RIYG ++   + +  +  F EE++ RDHRK+ +E +LF   +   G 
Sbjct: 119 TYWEGNPEMETLQRIYGISFPDSKMMKDWEKFQEEAKSRDHRKIGKEQELFFFHDLSPGS 178

Query: 266 IFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCA 324
            F+  +G  I+  L+ ++R +    ++ E+ +P + +  LW+ SGHW  Y  NMF     
Sbjct: 179 CFFLPRGAFIYNALMDFIREEYHKRNFTEVLSPNMYNSKLWETSGHWQHYSNNMFTFDVE 238

Query: 325 DDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVR 384
            DT      FALKPMNCPGH  +F H  +S+RE+PVR A+FG ++RNE SG+L GL RVR
Sbjct: 239 KDT------FALKPMNCPGHCLMFAHRPRSWREMPVRFADFGVLHRNELSGTLSGLTRVR 292

Query: 385 GFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
            F QDDAH+FC  EQ+  E     + + S+Y  FGF   +  LSTRPE  +G   +WD+A
Sbjct: 293 RFQQDDAHIFCMVEQIEEEIKGCLHFLQSVYSTFGFSFQLN-LSTRPEHFLGEIEIWDEA 351

Query: 445 ENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPS 504
           E  ++  L       +      +  G+GAFYGPK +  +KDAIGR  QC TIQ+DF LP 
Sbjct: 352 ERQLQNSLVEFGKPWK------INPGDGAFYGPKIDIKIKDAIGRYHQCATIQLDFQLPI 405

Query: 505 RFNAFYVNSHSEKC-HPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSS 563
           RFN  YV+   +    PV+IHRA+ GS+ER I I+ EN+ G  PLWLSP Q +V  +  +
Sbjct: 406 RFNLTYVSKDGDDKNRPVIIHRAILGSVERMIAILSENYGGKWPLWLSPRQVMVIPVGPA 465

Query: 564 AVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
              YA +++          + D  +  T+N KIR   + +   I++ G+KE    ++ +R
Sbjct: 466 CENYALQVSKECFEEGFMADVDLDDSCTLNKKIRNAQLAQYNFILVVGEKEKINNAVNVR 525

Query: 623 RFGSTTTQKVSLLDAIPILTK 643
              +    ++S+   I  L  
Sbjct: 526 TRDNKIHGEISIASVIEKLKN 546


>gi|148654295|ref|YP_001274500.1| threonyl-tRNA synthetase [Roseiflexus sp. RS-1]
 gi|148566405|gb|ABQ88550.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Roseiflexus sp.
           RS-1]
          Length = 595

 Score =  519 bits (1336), Expect = e-145,   Method: Composition-based stats.
 Identities = 234/590 (39%), Positives = 354/590 (60%), Gaps = 30/590 (5%)

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIAR 132
           +RHS AH+MA+AV  I+PE ++AIGP IEDGFYYDFD  +P + D+L +IE++M+ IIA 
Sbjct: 13  LRHSAAHVMAQAVLEIFPEGKIAIGPPIEDGFYYDFDLPRPLTPDDLEEIEQRMRRIIAG 72

Query: 133 DSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-----------VTLYRQGEWFD 181
             PF+ + +  ++AR L   + + YK+E++E +   ++           ++ Y+   + D
Sbjct: 73  RHPFVYRVVDPDEARAL--FRDQPYKLELIEGLLHGQDEYGEQSGSSTVISTYKHDTFED 130

Query: 182 LCRGPHVRSTGQ-VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           LCRGPH+  TGQ     FKLM VAGAYWRGDSNRPML RIYGTAWN+++EL  YL+ LEE
Sbjct: 131 LCRGPHLEHTGQIPPDAFKLMSVAGAYWRGDSNRPMLQRIYGTAWNSKEELDAYLHRLEE 190

Query: 241 SEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           +++RDHR++ +E+ LF+ ++D G G+  +  KG  +   + SY+R  + +  Y+ + T  
Sbjct: 191 AKRRDHRRIGKELGLFYFSDDIGPGLPLFTPKGEMLRHLMESYVREVQTRYGYQHVWTGH 250

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG-LKSYRE 357
           ++ + L+++SGH+++YR NMF     D    +   + LKPMNCP H+ ++    + SYR+
Sbjct: 251 IVREALYKKSGHYEAYRENMFPPMVED----EEHIYRLKPMNCPSHMTLYKEMGIHSYRD 306

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R AEF ++YR E  G+L GL RVR  TQDD H+FC  +Q+  E      LI  + + 
Sbjct: 307 LPLRFAEFATLYRYEDRGTLTGLTRVRALTQDDCHIFCRPDQIEEEFGLALRLIREVLET 366

Query: 418 FGFEKIMVKLSTRPE--KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           + F    V+LS R    K +  D  WD AE+ ++  LD         +      GE A Y
Sbjct: 367 YRFTDYRVRLSLRGAGGKYITDDEAWDLAEHALRTALDH------YGVEYEEAPGEAAIY 420

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +++ +D +GR+WQ  TIQVDF  P R    Y+    +   PV++HRAV GS ERF+
Sbjct: 421 GPKADFLARDVLGREWQLSTIQVDFIQPRRLGLEYIAEDGQPRTPVVLHRAVTGSTERFL 480

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYK 594
           G++IE++ G  PLWL+P+QAIV  I+      YA E+   L +  L +E D   + +  K
Sbjct: 481 GVLIEHYAGAFPLWLAPVQAIVIPISDERHSAYAAEVGRQLTAAQLRVEVDLSKDRMQAK 540

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           IR+  ++KIP ++I GD+E    ++ +R         +S+   I     E
Sbjct: 541 IRQAQLQKIPYMLIIGDREQRAGAVAVRTRSGEDLGAMSVAAFIERARAE 590


>gi|237750837|ref|ZP_04581317.1| threonyl-tRNA synthetase [Helicobacter bilis ATCC 43879]
 gi|229373282|gb|EEO23673.1| threonyl-tRNA synthetase [Helicobacter bilis ATCC 43879]
          Length = 612

 Score =  518 bits (1335), Expect = e-145,   Method: Composition-based stats.
 Identities = 242/618 (39%), Positives = 368/618 (59%), Gaps = 30/618 (4%)

Query: 36  KKAVAVAINGKVCDLSDP----VREGSIEIITPED-PRSLAVIRHSCAHIMAEAVQSIWP 90
           ++ +    N  + D        +   S+E I   D P +  +IRH+CAH++AEA+++++P
Sbjct: 2   QQIIGYIHNNSIIDTQTAAENNLNTQSLEPIYFTDTPNAHEIIRHTCAHLLAEAIKALYP 61

Query: 91  EVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELF 150
           E +  +GP++++GFYYDF  +     D+LA IE KM+EI  +     K +LS ++A E  
Sbjct: 62  EAKFFVGPVVDEGFYYDFKVDSKIGVDDLATIESKMKEIAKKGHKLTKIHLSRKEAIER- 120

Query: 151 ESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRG 210
               +  K  ++  I   +  ++Y+QG++ DLCRGPH+     ++ F KL K++GAY  G
Sbjct: 121 -FSGDELKQAVMSKIEGDD-FSIYQQGDFEDLCRGPHLPHLKLLQAF-KLTKISGAYLGG 177

Query: 211 DSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWH 269
           D +  +L+RIYG A+  ++ L QYL+ LEE++KRDHRKL  EM+LF   ED   G+  W 
Sbjct: 178 DEDSEVLTRIYGIAFAEKENLKQYLFQLEEAKKRDHRKLGVEMELFTFEEDVGAGLPIWL 237

Query: 270 RKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTI 328
            KG ++ + +   + R  I ++YE +  P++L   +W+ SGH+  Y+ NM+       T 
Sbjct: 238 PKGARLRRRIEELLTRALILNEYEPVRCPEILKSDVWKISGHYTHYKENMYF------TT 291

Query: 329 KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQ 388
            D   + +KPMNC GH+ V+ + ++SYRELP+R  E+G V+R+E SG LHGL+RVR FTQ
Sbjct: 292 IDEVEYGIKPMNCVGHIKVYQNSIRSYRELPLRFYEYGVVHRHEKSGVLHGLLRVREFTQ 351

Query: 389 DDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIM 448
           DDAH+FC  EQ+ NE   I      I   FGF   M +LSTRPE+ +G D++W+ A   +
Sbjct: 352 DDAHIFCRPEQIENEVNNILRFTHKIMNAFGFSYEM-ELSTRPEQSIGEDSVWESATLAL 410

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
           +  L      + + I+  V  G GAFYGPK +  + DAIGR WQCGTIQ+D NLP RFN 
Sbjct: 411 QNAL------AGNNISYQVDEGGGAFYGPKIDIKITDAIGRKWQCGTIQIDMNLPERFNL 464

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYA 568
            Y++ ++E   PVMIHRA+ GS ERF+ I+ E+F G  P +++P Q I+  I  S V  A
Sbjct: 465 SYIDENNEHAMPVMIHRAILGSFERFVAILTEHFGGEFPFFIAPTQVIIIPINESHVSMA 524

Query: 569 QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRF---- 624
           Q + N L+   +  E   +NE++N KIR    +K+P+I + GDKE +  S+ IR      
Sbjct: 525 QNLQNELRLRGIYAELSLKNESLNKKIRTAEKQKVPMIALIGDKELNNNSVSIRDRRMKM 584

Query: 625 --GSTTTQKVSLLDAIPI 640
             G     ++S+ + +  
Sbjct: 585 DSGENMQYEMSMQEFLEK 602


>gi|322819645|gb|EFZ26679.1| threonyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 816

 Score =  518 bits (1335), Expect = e-145,   Method: Composition-based stats.
 Identities = 207/759 (27%), Positives = 348/759 (45%), Gaps = 126/759 (16%)

Query: 1   MPSDIKLTFPDGSIKNFPVH-ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGS 58
           M + I +T PDG          T  D+A+ +S S A++ +   +N ++ DL+     + +
Sbjct: 59  MQAPITITLPDGKQLPATSWLTTPIDIAKRLSNSQAERVIVARVNDELWDLTRVFEGDAT 118

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSD 117
           +E++  +DP +  V  HS +H++  A++ ++   ++++GP +E+G F+Y+ D  +P S  
Sbjct: 119 LELLDWDDPEARHVFWHSSSHVLGYALERVF-HTRLSVGPALEEGGFFYEGDTGRPLSET 177

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +   IE  MQE++    P+ +  +S   A  LF   +   K+ +   +P     T+YR G
Sbjct: 178 DYKSIEIAMQELVKMKMPYQRLTVSKADALRLFGYTEFKSKI-LASKVPENGFCTVYRCG 236

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
              D CRGPH+  TG+VK F  + K + +Y+ G +   +L R+YG ++  Q  LT++   
Sbjct: 237 HLIDPCRGPHLPDTGRVKAF-AVTKNSSSYFEGKAENAVLQRVYGISFPKQTMLTEWKAL 295

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
             E+ +RDHR + R+  LF   E   G  FW   G +I+  L+ + R++ +   +EE+ +
Sbjct: 296 QAEAARRDHRNIGRQQQLFGFHEVSPGSAFWLPHGARIYNALVEFQRKQYRRRGFEEVVS 355

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +    LW  SGHWD Y  NMF +      + +     +KPMNCPGH  ++     SY+
Sbjct: 356 PNMFSSKLWMVSGHWDKYADNMFRI------VVEKEDHGMKPMNCPGHCIMYAMQQHSYK 409

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ELP+R A+FG ++RNE SG+L GL RVR F QDDAH+FC  +Q+  E       +  +Y+
Sbjct: 410 ELPIRYADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCRMDQVQEEIRGALVFLDDVYR 469

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENI----------------------------- 447
             GF+  + K +TRPE ++G++ +WD AE                               
Sbjct: 470 TLGFKFFL-KHATRPENKLGTEEMWDQAEAYLRAALNSFCGIPEHLPDPFKEGTTFTFDG 528

Query: 448 -------MKGVLDTIKNSSQDRIN------------------TGVLLGEGAFYGPKFEYI 482
                  ++ +L     + +++                         G+GAFYGPK + +
Sbjct: 529 RRDSVKKLRALLKKQAANRENKDTDKKEEKDDEWKGPTHAEAWEENTGDGAFYGPKIDIV 588

Query: 483 LKDAI--------------------------------GRDWQCGTIQVDFNLP------- 503
           ++DA+                                G   +      D N P       
Sbjct: 589 VEDALRRRHQCATVQLDFNLPQRFGLKYTLPTSTVEGGAGAEAREHHTDPNAPNVGTDAT 648

Query: 504 -------------------SRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
                              +R         + +  PVMIHRA+FGS+ER I I+ E++ G
Sbjct: 649 TTEGKPEAEDECLSSYEKAARELCIDRRLDANQARPVMIHRAIFGSLERCIAILCEHYGG 708

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             PLWLSP Q IV  +++    YA ++ +   +     + D  N T++ KIR   + +  
Sbjct: 709 EWPLWLSPRQVIVIPVSAENTTYATKVRDAFYADGFHADVDSGNATLDKKIRNAEVARYN 768

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            I + G  E   +++ +R   +      SL D    L +
Sbjct: 769 FIFVVGQVEEETQTVNVRTRDNRRHGTKSLADVQRWLRE 807


>gi|121612820|ref|YP_999926.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|166223331|sp|A1VXT5|SYT_CAMJJ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|87250382|gb|EAQ73340.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           81-176]
          Length = 602

 Score =  518 bits (1334), Expect = e-144,   Method: Composition-based stats.
 Identities = 242/615 (39%), Positives = 368/615 (59%), Gaps = 20/615 (3%)

Query: 34  LAKKAVAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQ 93
           + K+ +A   N  + D          EI       SL VIRHSCAH+MA+A++S++PE +
Sbjct: 1   MEKEVIAYLDNETIIDSQSVKNTNLKEIYFDNSKESLEVIRHSCAHLMAQAIKSLYPEAK 60

Query: 94  VAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESK 153
             +GP+IEDGFYYDF  E     ++L +IEKKM+E+        K  ++  +A    + +
Sbjct: 61  FFVGPVIEDGFYYDFRVESKIGEEDLVKIEKKMKELAEAKIEISKYEITKSEALA--KFQ 118

Query: 154 KEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSN 213
            +  K E+L  IP    V++Y+QGE+ DLCRGPH  +T  ++ FFKL +VAGAY  GD  
Sbjct: 119 NDDLKQEVLLRIPDGA-VSIYKQGEFEDLCRGPHAPNTKFLR-FFKLTRVAGAYLGGDEK 176

Query: 214 RPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKG 272
           R ML+RIYGTA+  ++ L +YL  +EE++KRDHRKL  E+ LF   ++ G G+  W   G
Sbjct: 177 REMLTRIYGTAFADKESLKEYLTIIEEAKKRDHRKLGTELKLFTFDDEIGGGLPIWLSNG 236

Query: 273 WKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
            ++   L   + +      YE +  P++L    W+ SGH+ +Y+ NM+  +       D 
Sbjct: 237 ARLRSKLEHMLYKIHRLRGYEPVRGPELLKADAWKISGHYANYKENMYFTQI------DE 290

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
           + + +KPMNC GH+ ++   ++SYR+LP++  E+G V+R+E SG LHGL RVR FTQDDA
Sbjct: 291 QEYGIKPMNCVGHIKIYQSDVRSYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFTQDDA 350

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
           H+FC   Q+  + L+I   + ++ K F F   M ++ST+PEK +G D +W+ A   +K  
Sbjct: 351 HIFCMPSQIKEQVLEILAFVDNLMKLFDFSYEM-EISTKPEKAIGDDEIWEIATKALKEA 409

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
           L+      +  +  G+  G GAFYGPK +  + DA+ R WQCGT+QVDFNLPSRF   Y 
Sbjct: 410 LN------EQGLKYGIDEGGGAFYGPKIDIKITDALKRKWQCGTVQVDFNLPSRFKLEYT 463

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
           +S +EK  PVM+HRA+ GS ERFIGI+ E+  G  P +++P    +  I  + + YA+EI
Sbjct: 464 DSDNEKKQPVMLHRAILGSFERFIGILTEHCAGEFPFFIAPTAVGIVPIGEAHIAYAKEI 523

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
              L   ++  E   +NE+++ KIR    +K+P+I++ GD E  +RS+ +R   +   + 
Sbjct: 524 QKELLELNIDSEVYEKNESLSKKIRIAEKQKLPMILVLGDDEVVKRSVALRDRRAKEQKN 583

Query: 632 VSLLDAIPILTKESL 646
           +SL + I  L KE +
Sbjct: 584 LSLDEFI-KLVKEKM 597


>gi|163846770|ref|YP_001634814.1| threonyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|222524584|ref|YP_002569055.1| threonyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
 gi|163668059|gb|ABY34425.1| threonyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|222448463|gb|ACM52729.1| threonyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
          Length = 594

 Score =  518 bits (1334), Expect = e-144,   Method: Composition-based stats.
 Identities = 227/601 (37%), Positives = 355/601 (59%), Gaps = 30/601 (4%)

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            + P        +RHS AH+MA+AV  I+P+ ++AIGP IE+GFYYDFD  +P + ++L+
Sbjct: 2   PVDPNSDPYYR-LRHSLAHVMAQAVLEIFPDAKIAIGPPIENGFYYDFDLPRPLTPEDLS 60

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIP-----------AKE 169
           +IE++M+ IIA + PF+ + ++ E+AR++     + YK+E++E +               
Sbjct: 61  EIERRMKRIIAGNHPFIYREVTAEEARQI--FANQPYKLELIEGLAKGLDEYGETHHGDT 118

Query: 170 NVTLYRQGEWFDLCRGPHVRSTGQVKK-FFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQ 228
            ++ YRQ  + DLCRGPH+  TG++    FKLM +AGAYWRGD     L RIYGT WNT+
Sbjct: 119 VISTYRQDTFEDLCRGPHLNHTGEINPEAFKLMSIAGAYWRGDEKNRQLQRIYGTGWNTK 178

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-K 286
           +EL  YL+ LEE+ KRDHR+L +E+ LF  ++D G G+  +  KG  I   +  ++R  +
Sbjct: 179 EELEAYLHRLEEARKRDHRRLGKELGLFFFSDDIGPGLPIFTPKGEIIRHEMEKFVREVQ 238

Query: 287 IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA 346
            +  Y+ + T  V+ + L+++SGH+D+YR +MF      + +     F LKPMNCP H+ 
Sbjct: 239 TRYGYQHVWTGNVVKEQLYRKSGHYDNYRDSMFPPMVESEDL----VFRLKPMNCPSHMT 294

Query: 347 VFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           ++N  G+ SYR+LP+R AEF ++YR E SG+L GL RVR  TQDD H+FC  +Q+  E  
Sbjct: 295 LYNQLGVISYRDLPLRFAEFATLYRYEDSGALSGLTRVRALTQDDCHIFCRPDQIQEEFS 354

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTR--PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
               +I  +   + F    V+LS R    K V  D  W+ A   ++  L+       + +
Sbjct: 355 LALQVIREVLGTYQFTDYKVRLSLRGSEGKYVQDDEKWELATAALRSALEA------NGV 408

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
               + GE AFYGPK +++ +D +GR+WQ  TIQVDF  P+R    Y+    +   PV++
Sbjct: 409 EYFEVEGEAAFYGPKADFLARDVLGREWQLSTIQVDFIQPARLGCEYIGEDDKPHTPVVL 468

Query: 524 HRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIE 583
           HRAV G+ ERF+GI+IE++ G  PLWL+P+QA+V  IT   +E+A+++   L    L +E
Sbjct: 469 HRAVTGTTERFMGILIEHYGGAFPLWLAPVQAVVIPITDKQMEFARQVRQRLFMAGLRVE 528

Query: 584 TDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            D   + +  KIR   ++KIP ++I G +E +  S+ +R         + +   +    +
Sbjct: 529 LDDNRDRMQGKIRRAQLQKIPYMLIIGAREEAADSVAVRTRAGEDLGAMPVDAFLARALE 588

Query: 644 E 644
           E
Sbjct: 589 E 589


>gi|19074578|ref|NP_586084.1| THREONYL tRNA SYNTHETASE [Encephalitozoon cuniculi GB-M1]
 gi|74697534|sp|Q8SRH2|SYTC_ENCCU RecName: Full=Probable threonyl-tRNA synthetase, cytoplasmic;
           AltName: Full=Threonine--tRNA ligase; Short=ThrRS
 gi|19069220|emb|CAD25688.1| THREONYL tRNA SYNTHETASE [Encephalitozoon cuniculi GB-M1]
          Length = 640

 Score =  518 bits (1333), Expect = e-144,   Method: Composition-based stats.
 Identities = 225/646 (34%), Positives = 359/646 (55%), Gaps = 28/646 (4%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            +K+   D  +       T  D+     +   K  ++  I+G   D+S  + ++  +E++
Sbjct: 5   KLKVELED-KVLEVTQGTTPYDILCDYFKD-RKDVISCRIDGVYSDMSSEILKDCKLELM 62

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T ED  +  +  HS AH++  A+ +++P+ ++  GP IE+GF+YD D   P SS++  +I
Sbjct: 63  TFEDDGARDIFWHSSAHVLGNALVNLYPDAKLVHGPPIEEGFFYDVDVTDPISSEDYEKI 122

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E++M +I+ ++  F +   S E+  E    +    K   +     KE+ ++YR G++FD+
Sbjct: 123 EEEMVKIMKKNYRFERVIKSKEELLE--AYRDNPCKTHFIMKGVDKES-SVYRNGDFFDM 179

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPH+RSTG +K   K++K + AY+  D N   L RIY   + ++  + +YL   EE++
Sbjct: 180 CLGPHIRSTGVIK-AVKVLKNSSAYFLNDPNLKSLQRIYAITFPSKGMMDEYLKRKEEAK 238

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD 301
           +RDHRK+  E+DLF  ++   G  F+   G  ++ TLI ++R + +   ++E+ TP +  
Sbjct: 239 ERDHRKIGTELDLFFFSKYSPGSCFFLPNGTTMYNTLIEFLREEYRKRGFKEVITPNIFC 298

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             LW++SGH  +Y+ NMF +        +  TFALKPMNCPGH  +F H   S+R+LP+R
Sbjct: 299 TQLWEESGHLQNYKENMFII--------EGDTFALKPMNCPGHCVMFRHQDHSFRDLPLR 350

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LA+FG ++RNE SG+L GL RVR F QDDAH+FCTK+Q+  E       +  +Y  FGF 
Sbjct: 351 LADFGVLHRNELSGTLTGLTRVRRFQQDDAHIFCTKDQVKEEIKGCLEFLSFVYGVFGFR 410

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
             +V LSTRPEK +GS   WD AE  +   +D      +  +   +  G+GAFYGPK + 
Sbjct: 411 FELV-LSTRPEKYLGSVDEWDRAEKALADAMD------ESNMPFKINAGDGAFYGPKIDI 463

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L DA+GR  QC TIQ+DF LP RF   Y +S  +   PV+IHRA+ GSIER I I++E+
Sbjct: 464 TLHDALGRRIQCATIQLDFQLPQRFELKYRDSDGQCRTPVIIHRAILGSIERMIAIILES 523

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           F   LP W+SP Q  +  + +   +Y  ++ ++L      ++      T++ +IR     
Sbjct: 524 FGKRLPFWISPRQIAIVNMGNP--DYVGKVRSVL--ARFRLDVIDDGNTLSKRIRTAETS 579

Query: 602 KIPIIIICGDKEASERSIGIR-RFGSTTTQKVSLLDAIPILTKESL 646
              ++ + G KEA    I IR    +       L D +  +  E +
Sbjct: 580 GYALVCVVGKKEAEANEINIRFNKSNRNIGLYELRDILDRMADEKV 625


>gi|114559273|ref|XP_001168878.1| PREDICTED: threonyl-tRNA synthetase-like 1 isoform 6 [Pan
           troglodytes]
          Length = 684

 Score =  518 bits (1333), Expect = e-144,   Method: Composition-based stats.
 Identities = 218/670 (32%), Positives = 336/670 (50%), Gaps = 64/670 (9%)

Query: 2   PSDIKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           P  IK++ P G  I     + T   +A  IS +LA  AVA  +NG+  DL  P+  +  +
Sbjct: 58  PRTIKISLPGGQKIDAVAWNTTPYQLARQISSTLADTAVAAQVNGEPYDLERPLETDSDL 117

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD--KEQPFSSD 117
             +T + P   AV  HS  H++  A +  +    +  GP  E GFY+DF   KE+     
Sbjct: 118 RFLTFDSPEGKAVFWHSSTHVLGAAAEQ-FLGAVLCRGPSTEYGFYHDFFLGKERTIRGS 176

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           EL  +E+  QE+ A   PF +   S ++ R+LF+     +K+ ++E        T+Y  G
Sbjct: 177 ELPVLERICQELTAAARPFRRLEASRDQLRQLFK--DNPFKLHLIEEKVTGPTATVYGCG 234

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
              DLC+GPH+R TGQ+     L   +  +    +    L R+ G ++ T + L  +  +
Sbjct: 235 TLVDLCQGPHLRHTGQIGGLKLLSNSSSLWRSSGAPET-LQRVSGISFPTTELLRAWEAW 293

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINT 296
            EE+E RDHR++ +E +LF   E   G  F+  +G +++  L++++R +     + E+ T
Sbjct: 294 REEAELRDHRRIGKEQELFFFHELSPGSCFFLPRGTRVYNALVAFIRAEYAHRGFSEVKT 353

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCA----------DDTIKDLRT-FALKPMNCPGHV 345
           P +    LW+QSGHW+ Y+ +MFAV+            DD+ + +    ALKPMNCP H 
Sbjct: 354 PTLFSTKLWEQSGHWEHYQEDMFAVQPPGSDRPPSSQSDDSTRHITDTLALKPMNCPAHC 413

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +F H  +S+RELP+RLA+FG+++R E SG L GL R+R F QDDAH+FCT +Q+  E  
Sbjct: 414 LMFAHRPRSWRELPLRLADFGALHRAEASGGLGGLTRLRCFQQDDAHIFCTTDQLEAEIQ 473

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
              + + S+Y   GF   +  LSTRP   +G   LWD AE ++K  L             
Sbjct: 474 SCLDFLRSVYAVLGFSFRLA-LSTRPSGFLGDPCLWDQAEQVLKQALKEFGEPWD----- 527

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
            +  G+GAFYGPK +  L DA+GR  QCGTIQ+DF LP RF+  Y               
Sbjct: 528 -LNSGDGAFYGPKIDVHLHDALGRPHQCGTIQLDFQLPLRFDLQY--------------- 571

Query: 526 AVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD 585
                                PLWLSP Q +V  + S   EYA+E    L++  L  + D
Sbjct: 572 -------------------KGPLWLSPFQVVVIPVGSEQEEYAKEAQQSLRAAGLVSDLD 612

Query: 586 -FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK- 643
                T++ +IR   +       + G KE S+R++ IR   +    +  L +A+  L + 
Sbjct: 613 ADSGLTLSRRIRRAQLAHYNFQFVVGQKEQSKRTVNIRTRDNRRLGEWDLPEAVQRLVEL 672

Query: 644 -ESLPPDCQK 652
             +  P+ ++
Sbjct: 673 QNTRVPNAEE 682


>gi|78776267|ref|YP_392582.1| threonyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251]
 gi|78496807|gb|ABB43347.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Sulfurimonas
           denitrificans DSM 1251]
          Length = 602

 Score =  517 bits (1332), Expect = e-144,   Method: Composition-based stats.
 Identities = 228/611 (37%), Positives = 367/611 (60%), Gaps = 23/611 (3%)

Query: 37  KAVAVAINGKVCDLSDPVREGSIE---IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQ 93
            A+A+  NG++ D+    +E   E   I+      SL V+RHS AH+MA+A++S++P+ +
Sbjct: 2   NAIAIKHNGEIIDMQTA-KECGFEGEQILLDNSEESLNVLRHSTAHLMAQAIKSLYPDAK 60

Query: 94  VAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESK 153
             +GP +++GFYYDF         +L  IEK+M  +  +     K  +S ++A+E  + K
Sbjct: 61  FFVGPNVKEGFYYDFKTSSEIGEGDLKNIEKEMLSLAKKKYEIEKYEISMDEAKE--KFK 118

Query: 154 KEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSN 213
            +  K+ +++ IP    V++Y+QGE+ DLCRGPH+ + G ++ F KL K+AGAY  GDS 
Sbjct: 119 DDHLKLFVMQRIPGD-RVSIYKQGEFEDLCRGPHLPNIGLIRYF-KLTKIAGAYLGGDSK 176

Query: 214 RPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKG 272
             ML+RIYG A+  ++ L  YL  + E+EKRDHRKL  EM +F   E+   G   W   G
Sbjct: 177 NEMLTRIYGIAFADKEALKSYLDMMAEAEKRDHRKLGAEMKMFTFREEVGAGFPIWLPAG 236

Query: 273 WKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
            ++   L S + +   K  YE +  P++L   LW+ SGH+ +Y  NM+       T  D 
Sbjct: 237 GRLRARLESLLFKAHRKRGYEPVRGPEMLRSDLWKTSGHYQNYGENMYF------TNIDE 290

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
             F +KPMNC GH+ ++   L SYR+LP++  E+G V+R+E +G+LHGL RVR FTQDDA
Sbjct: 291 IEFGVKPMNCVGHIKIYEEDLHSYRDLPLKYFEYGVVHRHEMTGALHGLFRVREFTQDDA 350

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
           H+FC  +Q+  + +++ + +  I   F F   M+ LST+P K VG D++W+ +   +K  
Sbjct: 351 HIFCRADQIEEQIIEVVDFVDKIMSTFEFNYKMM-LSTKPAKAVGDDSVWEVSTQALKNA 409

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
           +D      ++ +   +  G GAFYGPK +  + DAIGR+WQCGTIQ+DFNLPSRF   Y 
Sbjct: 410 MD------KNGLVYEIDEGGGAFYGPKIDIKITDAIGREWQCGTIQLDFNLPSRFELEYN 463

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
             +++K  PVMIHRA+ GS ERFIGI+ E++ G  P++++P Q  +  I  +  +YA+E+
Sbjct: 464 GENNDKIQPVMIHRAILGSFERFIGILTEHYAGEFPMFIAPTQVAIVPIAPTHNDYAKEL 523

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
           ++ L       E   +N+++N ++R     ++P++++ GD+E + R++ IR   +     
Sbjct: 524 SDKLMDLGADSEIYSKNDSLNKRVRTAEKTRVPMLVVIGDEEVASRTVAIRDRRTREQYN 583

Query: 632 VSLLDAIPILT 642
           +S  + + ++ 
Sbjct: 584 LSESEFLSLIQ 594


>gi|328876049|gb|EGG24413.1| threonyl-tRNA synthetase [Dictyostelium fasciculatum]
          Length = 786

 Score =  517 bits (1331), Expect = e-144,   Method: Composition-based stats.
 Identities = 215/691 (31%), Positives = 341/691 (49%), Gaps = 66/691 (9%)

Query: 5   IKLTFPDGSIKNFPVH-ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEII 62
           I +  PDG         +T   +A SIS+SLAK ++   ++G    L+  +  G S+E++
Sbjct: 102 IDIGLPDGRKIEGKKGESTPLIIASSISKSLAKSSLLAKLDGIPLSLTSVLEHGGSLELL 161

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIG-------------------PIIEDG 103
             E         +S + ++A A++                               ++ DG
Sbjct: 162 DFESEEGRRCFWYSSSIVLAMAMRKHILSTYYNNNQQQQQHQVIITANQANITKSLLLDG 221

Query: 104 FYYDF---DKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVE 160
           F  D    D        ++  I+K M  I+  ++ F ++ +S +   +L       Y ++
Sbjct: 222 FQADIYLSDTSVTIKETDVKSIKKIMDTIVKENNIFKREKVSKQSLIDLLNKGNNKYGLD 281

Query: 161 ILESIPAKE----NVTLYRQGE--WFDLCRGPH--------VRSTGQVKKFFKLMKVAGA 206
            LE+I   E     V   + G+  +  +C G          + STG +K F  L   A  
Sbjct: 282 ELENIKENEINIIRVAYKKNGDEEFIVICNGQDNQLGLDCTLPSTGYIKAFDILRNSAVV 341

Query: 207 YWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVI 266
             R D +   L R+ G ++ +  +L  +    E + + DHR + RE +LF       G  
Sbjct: 342 GSRADMSH--LQRLAGISFPSNSQLDLFREQQELAAQLDHRNIGREQELFFFHPYSPGSC 399

Query: 267 FWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD 325
           F+   G K++  L+S++R + +   Y+E+ TP +  Q LW+ SGHW +Y+ NMF+ +C  
Sbjct: 400 FFLPHGAKVYNKLLSFLRGEYRRRGYQEVITPNIYSQKLWEVSGHWQNYKDNMFSFQC-- 457

Query: 326 DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRG 385
               D  T++LKPMNCPGH  ++ H ++SY+ELP+R A+FG ++RNE  GSL GL RVR 
Sbjct: 458 ----DHTTYSLKPMNCPGHCLMYAHRVRSYKELPMRYADFGVLHRNETHGSLTGLTRVRR 513

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
           F QDDAH+FC  +Q+  E     + +  +Y+ FGF   +   +   E  +G    W+ AE
Sbjct: 514 FQQDDAHIFCRTDQIEEEMRACLDFLQYVYRVFGFTFSLELSTRPKEGYLGDLDTWNRAE 573

Query: 446 NIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSR 505
           N ++ VL+             +  G+GAFYGPK +  +KDA GR  QC TIQ+DF LP R
Sbjct: 574 NALEQVLNESFRGH-----WRLNEGDGAFYGPKIDIHIKDANGRSHQCATIQLDFQLPQR 628

Query: 506 FNAFYVN------------SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI 553
           FN  +              + S+   PVMIHRA+FGS ER + I+IE+ KG  P WLSP 
Sbjct: 629 FNLEFTTSGVAETDDPSALAPSKFERPVMIHRAIFGSTERMLAILIEHTKGKWPFWLSPR 688

Query: 554 QAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRN-ETINYKIREHSIKKIPIIIICGDK 612
           Q +VT+I  +  EYA++I   L      ++ D    +TI  K+R+  I K   +I+ G++
Sbjct: 689 QVLVTSIGDAHNEYAEKIRQDLHLAGYEVDIDTSAHKTIKKKLRDAIILKYNYVIVVGNE 748

Query: 613 EASERSIGIRRFGSTTT-QKVSLLDAIPILT 642
           E +  ++ +RR    +T Q +SL   +  L 
Sbjct: 749 EVTNNTVSVRRRDGDSTPQSMSLSSLLDELQ 779


>gi|281211698|gb|EFA85860.1| threonyl-tRNA synthetase [Polysphondylium pallidum PN500]
          Length = 730

 Score =  517 bits (1331), Expect = e-144,   Method: Composition-based stats.
 Identities = 204/665 (30%), Positives = 333/665 (50%), Gaps = 45/665 (6%)

Query: 2   PSDIKLTFPDGSIKNFPVHA-TGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE--GS 58
              I +  PDG   N      T   VA +IS+SLA + +   +NGK+  + + + E   +
Sbjct: 82  SDTIDIILPDGRKINGQKGVSTPFSVARTISKSLANRVLLSRVNGKLHGIGEALNERESN 141

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-------IIEDGFYYDFDK- 110
           +E++  E+  +      S + + A A    +                 ++DG+  D    
Sbjct: 142 VELLDFENDDARRCFWLSSSIVTAAAAMQHFGSNSFITHHNYLLTNNALQDGYQVDMYLP 201

Query: 111 -EQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES--IPA 167
             +  +  ++  I+K M  +I  D PF ++ ++ +++ E+F       KV I+ +     
Sbjct: 202 ENRTITESDIKSIQKIMTTLIQSDKPFTRKSITKKQSLEIF-------KVYIINNNFKND 254

Query: 168 KENVTLYRQGEWFDLCRG-PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWN 226
            + V +     +  L    P + S+G++K     +    +     +  P L R+ G ++ 
Sbjct: 255 GDIVEIVEFNGFITLVDKIPTLMSSGKLK--CIELTKNSSIVGSLAALPTLQRLSGISFP 312

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
            +++L  +     ++ + DHR + R+ +LF       G  F+   G +I+  L S++R +
Sbjct: 313 EKEQLAVWKDLQHQAAQLDHRNIGRDQELFFFHPYSPGSCFFLPHGTRIYNKLHSFLRSE 372

Query: 287 IK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +   +EE+ TP +  Q LW+ SGHW +Y+ NMF  +C      D  +++LKPMNCPGH 
Sbjct: 373 YRKRGFEEVITPNIYSQKLWETSGHWQNYKDNMFGFQC------DHTSYSLKPMNCPGHC 426

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +F H   SY++LP+R+A+FG ++RNE  GSL GL RVR F QDDAH+FC  +Q+  E  
Sbjct: 427 LMFAHKSHSYKDLPMRIADFGVLHRNETHGSLTGLTRVRRFQQDDAHIFCRADQIREEIQ 486

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
           K    +  +Y  FGF   + +LSTRP   +G   +W+ AE  ++ VL+            
Sbjct: 487 KCLEFMQFVYDKFGFSFSL-ELSTRPTPFLGDVDMWNRAEASLESVLNEFGR------EW 539

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
            V  G+GAFYGPK +  +KDA G+  QC TIQ+DF LP RF   Y  + S    PVMIHR
Sbjct: 540 RVNPGDGAFYGPKIDIHIKDANGKSHQCATIQLDFQLPIRFGLEYTAADSRAERPVMIHR 599

Query: 526 AVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSS-------AVEYAQEIANLLKSH 578
           A+FGS ER + I+IE+ KG  PLWLSP Q  +  ++ +         +Y   +   L   
Sbjct: 600 AIFGSTERMMAILIEHTKGKWPLWLSPRQIFIAPVSVNSDGSGGPYNDYLNAVKQRLFDA 659

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
              I++D  ++TIN K+RE    +   +++ G +E    +I IRR  ST    ++L   +
Sbjct: 660 GYHIDSDLSDKTINKKLREAITLRYNYLVVIGKEEQDNNTITIRRRDSTDQITLTLDKFL 719

Query: 639 PILTK 643
             L  
Sbjct: 720 EELND 724


>gi|149910913|ref|ZP_01899544.1| threonyl-tRNA synthetase [Moritella sp. PE36]
 gi|149805980|gb|EDM65964.1| threonyl-tRNA synthetase [Moritella sp. PE36]
          Length = 513

 Score =  517 bits (1330), Expect = e-144,   Method: Composition-based stats.
 Identities = 256/529 (48%), Positives = 353/529 (66%), Gaps = 19/529 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP    +T PDG+ + F    T  +VA  IS  LAK  +A  ING+  D  D +  + +I
Sbjct: 1   MPV---ITLPDGAQRQFDNPVTIMEVAADISSGLAKACIAGRINGERVDACDLITEDAAI 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT +D   L ++RHSCAH++  A++ +WP  ++AIGP I+ GFYYD + E+P S  +L
Sbjct: 58  EIITSKDADGLEILRHSCAHLLGHAIKQLWPNTKMAIGPTIDKGFYYDVEMEEPISEADL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
           A++EK M +++  +   +K+ +S ++AR+ FE++ E YKV IL E+I   E   LY   E
Sbjct: 118 AKLEKHMNKLVKTNYQVVKKVVSWQEARDTFEARGETYKVAILDENIGKDETPALYYHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV      + F KLM +AGAYWRG+S+  ML RIYGTAW  ++EL  ++  L
Sbjct: 178 YVDMCRGPHVPVMKHCQHF-KLMSIAGAYWRGNSDNKMLQRIYGTAWTDKKELKAHIERL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
            E+EKRDHRK+ +++DL+H+ ED  G++FWH  GW IF+ L + +R K+++ DY+E+  P
Sbjct: 237 AEAEKRDHRKIGKQLDLYHMQEDAPGMVFWHNDGWIIFRELENLIREKLREFDYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           Q++D+ LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV ++N GLKSYR+
Sbjct: 297 QIMDRSLWEKSGHWDKYSEGMF------CTHSENREYAIKPMNCPGHVQIYNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+ Q+  E      ++   Y  
Sbjct: 351 LPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTESQIQKEVSDCIKMVFETYAT 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGFE I +KLSTRPEKRVGSD  WD +E  +   L          ++  V  GEGAFYGP
Sbjct: 411 FGFENIEIKLSTRPEKRVGSDETWDKSEQALADALTASG------LSYDVQEGEGAFYGP 464

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
           K E+ L D + R WQCGTIQ+DF++P +  A YV   + +  PVMIHRA
Sbjct: 465 KIEFTLHDCLDRAWQCGTIQLDFSMPEKLGAEYVCESNGRETPVMIHRA 513


>gi|296271847|ref|YP_003654478.1| threonyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299]
 gi|296096022|gb|ADG91972.1| threonyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299]
          Length = 602

 Score =  517 bits (1330), Expect = e-144,   Method: Composition-based stats.
 Identities = 232/610 (38%), Positives = 362/610 (59%), Gaps = 23/610 (3%)

Query: 39  VAVAINGKVCDLSDPVR---EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVA 95
           + V  +G++ DL        +G + I       SL ++RHSCAH+MA+A++ ++PE +  
Sbjct: 4   IGVLNDGQIYDLQTAEALNIQGEV-IKADNSKESLEILRHSCAHLMAQAIKELYPEAKFF 62

Query: 96  IGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKE 155
           +GP++ +GFYYDF  E   S ++L +IEKKM+E+     P  +   S E+  +  +   +
Sbjct: 63  VGPVVSEGFYYDFKVESKISDEDLPKIEKKMKELANAKLPIERYEASREEISQ--KFNSD 120

Query: 156 AYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRP 215
             K  +L  I   + +T+Y+QG++ DLCRGPH+ +T  ++ F KL +VAGAY  GD    
Sbjct: 121 ELKQAVLSRIT-DDTLTMYKQGDFEDLCRGPHLPNTRMIRSF-KLTRVAGAYLGGDEKNE 178

Query: 216 MLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWK 274
           M++RIYG A+  +QEL  Y+  LEE++KRDHRKL  E++LF  ++D   G+  W   G +
Sbjct: 179 MITRIYGIAFFDKQELFDYVKMLEEAKKRDHRKLGTELELFTFSDDVGAGLPMWLPNGAR 238

Query: 275 IFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           +   L   + +      YE +  P++L   +W  SGH  +Y  NM+       T  D + 
Sbjct: 239 LRSKLEHILYKAHRVRGYEPVRGPEILKSKMWDISGHNANYSQNMYY------TTIDEQQ 292

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
           +A+KPMNC GH+ +F + L SY++LP +L E+G V+R+E SG++HGL RVR FTQDD+H+
Sbjct: 293 YAMKPMNCVGHIQIFKNSLVSYKDLPKKLFEYGVVHRHEMSGAMHGLFRVREFTQDDSHI 352

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
           FCT++QM +   ++   + ++ K F F+  + ++ST+PEK +G D  W+     +   LD
Sbjct: 353 FCTQDQMKDVIFEVLEFVDAVLKLFDFKYEI-EVSTKPEKAIGDDMFWEKTTKGIMDALD 411

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS 513
                 +  I  G+  G GAFYGPK +  + DAIGR WQCGT+QVD NLPSRF A Y+N 
Sbjct: 412 ------EKNITYGIDEGGGAFYGPKIDIKILDAIGRKWQCGTVQVDMNLPSRFEAEYINE 465

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIAN 573
             EK  PVMIHRA+ GS ERFIGI+ E+  G  P  ++P Q I   I  +  EYA+E+ N
Sbjct: 466 KGEKEQPVMIHRAILGSFERFIGILTEHCAGEFPFVIAPTQVIFVPIADTHNEYAKELQN 525

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            L  + +  +    NE++N +IR    +++P+I++ GD+E   +++ +R         + 
Sbjct: 526 ELLQNSMDSKIFNMNESLNKRIRMAEKQRVPMIVVIGDEEVENKTVALRDRRKREQSNMG 585

Query: 634 LLDAIPILTK 643
             + I +L +
Sbjct: 586 KTEFIQMLNE 595


>gi|301626888|ref|XP_002942619.1| PREDICTED: threonyl-tRNA synthetase, cytoplasmic-like [Xenopus
           (Silurana) tropicalis]
          Length = 683

 Score =  516 bits (1328), Expect = e-144,   Method: Composition-based stats.
 Identities = 202/647 (31%), Positives = 327/647 (50%), Gaps = 70/647 (10%)

Query: 2   PSDIKLTFPDGSIKNF-PVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
             +I ++   G   +      T  D+A   S SLA+ AVA  +NG + DL+ P+  + ++
Sbjct: 89  SRNINVSLSGGREISGQSWKTTPYDIALQTSPSLARSAVAARVNGALYDLNRPLEEDCAV 148

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDE 118
           E +T +     A+  HS AHI+  A++  +    +  GP  E+G++YD            
Sbjct: 149 EFLTFDSREGQAIFWHSSAHILGLALEQHYEGC-LCHGPSTENGYFYDIYLPNSTVLGSH 207

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L  +E   +++I +  PF +  ++ E   ELF+     +K+  +E        T+YR G 
Sbjct: 208 LPDLETVCKDVIKQKLPFQRIEVAREDLLELFKY--NKFKIRTIEDKV-DTCTTVYRCGS 264

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLCRGPHVR TGQ++   KL+K + ++WR D  +  L R+YG ++   ++L ++    
Sbjct: 265 LVDLCRGPHVRHTGQIR-ALKLLKNSSSFWRSDPTQEALQRVYGISFPEGKQLKEWEKAQ 323

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
           EE+  RDHRK+ R+ +L+   +   G  F+  +G  I+  LI +++ + +   + E+ TP
Sbjct: 324 EEAINRDHRKIGRDQELYFFHDLSPGSCFFLPRGAHIYNVLIDFIKSEYRKRGFTEVITP 383

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  LW+ SGHW+ Y  NMF+    ++T      F+LKPMNCPGH  +F+H  +S+RE
Sbjct: 384 NMYNNKLWETSGHWEHYGKNMFSFTVEEET------FSLKPMNCPGHCLMFDHRPRSWRE 437

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+RLA+FG ++RNE SG+L GL RVR F QDDAH+FC+ EQ+  E     + + ++Y  
Sbjct: 438 LPLRLADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCSMEQLEGEINGCLDFLRTVYSV 497

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF    + LSTRPE+ +G + +W  AE  ++  L+                       P
Sbjct: 498 FGFT-FKLFLSTRPEQFMGEEEVWQQAEAELEKSLNGFGL-------------------P 537

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +                                       PVMIHRAV GS+ER + I
Sbjct: 538 KAD----------------------------------GAVERPVMIHRAVLGSVERMLAI 563

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FRNETINYKIR 596
           + EN+ G  PLWLSP Q +V  +  +   YA ++  ++      ++ D     T+N KIR
Sbjct: 564 LAENYGGKWPLWLSPFQVMVIPVGPNVESYAYKVQRMIHDAGFMVDLDTDHGTTLNKKIR 623

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  + +   I++ GDKE    ++ +R   S    +  L   +  LT+
Sbjct: 624 KAQVAQYNFILVVGDKEKQNSTVNVRTRDSKQHGERELKALLVRLTE 670


>gi|240143521|ref|ZP_04742122.1| threonine--tRNA ligase [Roseburia intestinalis L1-82]
 gi|257204557|gb|EEV02842.1| threonine--tRNA ligase [Roseburia intestinalis L1-82]
 gi|291540396|emb|CBL13507.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Roseburia
           intestinalis XB6B4]
          Length = 591

 Score =  515 bits (1327), Expect = e-144,   Method: Composition-based stats.
 Identities = 217/594 (36%), Positives = 360/594 (60%), Gaps = 25/594 (4%)

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE-L 119
           ++  ++   L  + HSCAH+MA+AV+ ++P  +  +GP++++GFYYD D      +D+ +
Sbjct: 1   MVDFKEDERLNTLNHSCAHVMAQAVKHLYPNAKFWVGPVVKEGFYYDIDLGDTAVNDDVI 60

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A IEK+M+++        ++ +S  +A ELF+   + YK+++++ +    N+++Y QG++
Sbjct: 61  AAIEKEMKKVCKEGKKIYRREISKAEALELFK--DDEYKLDLIDGL-EDGNISVYDQGDF 117

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV +T   K F KL+K +G YW+GD+N  ++ RIYG  + T +EL ++L  LE
Sbjct: 118 TDLCRGPHVDNTKLCKNF-KLIKYSGVYWKGDANNHVMQRIYGVCFPTAEELEEHLKLLE 176

Query: 240 ESEKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTP 297
           E++ RDHRK+ +EM LF   +  G G+  +  KG+ ++Q L +Y++ ++ K  Y  + TP
Sbjct: 177 EAKDRDHRKIGKEMHLFMSDDLVGRGLPMFLPKGYTVWQELENYIKAKERKLGYLHVMTP 236

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            V   +L++ SGHWD Y+ NMF          +  +F L+PMNCP H+ ++ + + SY++
Sbjct: 237 CVGTVNLYKTSGHWDHYKENMFPAMEV-----EGESFVLRPMNCPHHMMIYANRMHSYKD 291

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+ E    +R E SG+L G+ R R F Q+DAH+F T EQ+ +E  K+  LI   YKD
Sbjct: 292 LPIRIGEIAHDFRFEASGTLKGIERGRHFCQNDAHLFVTPEQIESEFAKVVELIFDTYKD 351

Query: 418 FGFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           F        LS R  +        D +W++AEN ++ VLD I       I     +GE A
Sbjct: 352 FNITDYRCVLSLRDPEDKVKYHDDDEMWNNAENALRKVLDDIG------IEYTEEIGEAA 405

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  +K AIG ++   T Q+DF LP++FN  Y++S   K  PV++HRA+ GS++R
Sbjct: 406 FYGPKLDVNVKPAIGNEYTLSTCQLDFCLPAKFNLSYIDSDGTKKTPVVLHRAILGSLDR 465

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVE---YAQEIANLLKSHHLSIETDFRNET 590
           F+  ++E  KGNLPLWL+P+QA +  + +   E   Y+ ++   L  + + +E D RNE 
Sbjct: 466 FMAYILEETKGNLPLWLAPVQAKILPVKNEDEELNAYSHDLYKYLDDNGIRVEIDERNEK 525

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           + Y+IRE  ++K+P +++ G  EA++ ++  R  G   +  VS  D + +L ++
Sbjct: 526 LGYRIREAQMEKVPYLLVLGKNEAADGTVSYRLHGEQNSTTVSREDFLALLKED 579


>gi|218134037|ref|ZP_03462841.1| hypothetical protein BACPEC_01927 [Bacteroides pectinophilus ATCC
           43243]
 gi|217991412|gb|EEC57418.1| hypothetical protein BACPEC_01927 [Bacteroides pectinophilus ATCC
           43243]
          Length = 585

 Score =  515 bits (1326), Expect = e-144,   Method: Composition-based stats.
 Identities = 215/594 (36%), Positives = 360/594 (60%), Gaps = 25/594 (4%)

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDEL 119
           ++  ++  +L  + HSCAH+MA+A++ ++P+ +  +GP++ +GFYYD D  +     +++
Sbjct: 1   MVNFKEDENLNTLNHSCAHLMAQAIKHLYPQAKFWVGPVVAEGFYYDVDLGDDVIRDEDI 60

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A IEK+M++I       +++ +S E+A E+F+   + YK++++ ++    N+T Y QG++
Sbjct: 61  AAIEKEMKKIAKTGKKIIRKEISKEEALEMFK--DDEYKIDLINNL-EDGNITCYEQGDF 117

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV +    + F KL++ +GAYW+GDSN  +L RIYG  + T +EL  +L  LE
Sbjct: 118 TDLCRGPHVDNVKLCRNF-KLIRHSGAYWKGDSNNKVLQRIYGVCFPTPEELEAHLQLLE 176

Query: 240 ESEKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           E+++RDHRK+ ++M LF + +  G G+  +  KG+ I+Q L +Y++ K +   Y  + TP
Sbjct: 177 EAKERDHRKIGKDMGLFMVDDLIGRGLPMFLPKGYVIWQELENYIKDKERKLGYLHVMTP 236

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +   +L++ SGHWD Y+ NMF          D  +F L+PMNCP H+ ++ + + SY++
Sbjct: 237 CIGTVNLYKTSGHWDHYKENMFPAMDV-----DGESFVLRPMNCPHHMMIYANRMHSYKD 291

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+ E    +R E SG+L G+ R R F Q+DAH+F T EQ+ +E  ++ +LI S YKD
Sbjct: 292 LPIRIGEIAHDFRYESSGTLKGIERGRHFCQNDAHIFVTPEQIEDEFKRVVDLIFSTYKD 351

Query: 418 FGFEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           FG       LS R      K    D +W+ AE+ ++ VL+ +       I     +GE A
Sbjct: 352 FGITDYRCVLSLRDPADKVKYHDDDEMWNKAEDALRTVLNDLG------IEYTEEIGEAA 405

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  +K A+G ++   T Q+DF LP++FN  Y++   EK  PV++HRA+ GS++R
Sbjct: 406 FYGPKLDVNVKPAVGNEYTLSTCQLDFCLPAKFNLTYIDKDGEKKTPVVLHRAILGSLDR 465

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNET 590
           F+  ++E  KGNLP WL+P+Q  V  +       +EYA EI + L+  ++ +E D R E 
Sbjct: 466 FMAYILEETKGNLPTWLAPVQVRVMPVKTDNEELMEYAHEICSALEEKNVRVELDDRGEK 525

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           + Y++RE  I+K+P +++ G  E  +R++  R  G   T  + L + +  +  E
Sbjct: 526 LGYRMREGQIQKVPYLLVIGFNEKEDRTVSYRLHGEADTTVLGLDEFVEKIDSE 579


>gi|159476198|ref|XP_001696198.1| hypothetical protein CHLREDRAFT_167047 [Chlamydomonas reinhardtii]
 gi|158282423|gb|EDP08175.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 688

 Score =  515 bits (1326), Expect = e-143,   Method: Composition-based stats.
 Identities = 199/647 (30%), Positives = 327/647 (50%), Gaps = 37/647 (5%)

Query: 5   IKLTFPDGSIKNFPVH-ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           IK+  PDG  +       T  D+A+ IS SLAKK V   ++G   DL+ P+  + ++++ 
Sbjct: 46  IKVIMPDGKERAAVQGVTTPMDIAKEISASLAKKVVVADVDGHAWDLARPLEGDCALKLF 105

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF-DKEQPFSSDELAQ 121
           + +D        HS AH++ +A++  +  V + IGP +E+GFYYD    ++  +  + A+
Sbjct: 106 SFDDTEGKDAFWHSSAHLLGQALELEF-GVDLTIGPALEEGFYYDCFMGDRTLTEADKAR 164

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +EK+++  +     F +  ++ E+A  +FE  K  +K+EI++ +PA   +T+YR G   D
Sbjct: 165 LEKRIEGSVKESQKFQRVVVTREEALSMFEENK--FKIEIIQGLPADATITIYRVGPMVD 222

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LC GPH+ ST  +K    + +++ A+WRGD  R  L R+YG  +   + L  Y + +EE+
Sbjct: 223 LCSGPHLPSTSYMK-AISVTQMSRAFWRGDVKREPLQRVYGVTFPDSKLLKDYQHRMEEA 281

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEE-INTPQVL 300
           +KRDHR +  + +LF       G  F+   G +I+  L+ Y+R K  +   E + TP + 
Sbjct: 282 KKRDHRVVGVQQELFFFHPLSPGSCFFLPHGARIYNNLVGYIREKYWEYEYEEVITPNIY 341

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  LW+ SGH D YR NMF+         + + F LKPMNCP                P 
Sbjct: 342 NFDLWKTSGHADHYRENMFSF------DIEKQEFGLKPMNCPARALHA----------PD 385

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM--FNECLKIHNLIISIYKDF 418
           RL           +  L+             + F +   M    E      L+  +Y+ F
Sbjct: 386 RLGTLSP----HTTTLLYPHRPPPPPPPVPGYAFTSLVIMSVMAEVQGFLKLLGEVYEVF 441

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           G +  M  LSTRPE  +G   LW+ AE  +   L++   +        +  G+GAFYGPK
Sbjct: 442 GLDCTMA-LSTRPEGYLGDIELWNKAEQALTDALNSTGKAW------VLNPGDGAFYGPK 494

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +  + DA+ R +QC T+Q+DF LP RF   Y +       PV++HRAV GS+ER   I+
Sbjct: 495 IDITVYDALRRKFQCATVQLDFQLPIRFGLEYASEAGTLERPVIVHRAVLGSVERMFAIL 554

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
            E+F G  P WL+P Q +V  I+ ++VEYA  +   L+S  L  + D  +  +  K+RE 
Sbjct: 555 TEHFAGKWPFWLNPRQVMVVPISENSVEYAFTVRKELRSAGLHCDVDSTDRKMQKKVREA 614

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
            + +   I++ G+ E + +++ +R   +       L D   ++  E 
Sbjct: 615 QLAQYNYILVVGEAEKTAQTVNVRTRDNVVHGMFKLSDVRELMVLER 661


>gi|71418959|ref|XP_811024.1| threonyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener]
 gi|70875641|gb|EAN89173.1| threonyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 816

 Score =  515 bits (1325), Expect = e-143,   Method: Composition-based stats.
 Identities = 206/759 (27%), Positives = 343/759 (45%), Gaps = 126/759 (16%)

Query: 1   MPSDIKLTFPDGSIKNFPVH-ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGS 58
           M + I +T PDG          T  D+A+ +S S A++ +   +N ++ DL+     + +
Sbjct: 59  MQAPITITLPDGKQLPATSWLTTPIDIAKRLSNSQAERVIVARVNDELWDLTRVFEGDAT 118

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSD 117
           +E++  +DP +  V  HS +H++  A++ ++   ++++GP +E+G F+Y+ D  +P S  
Sbjct: 119 LELLDWDDPEARHVFWHSSSHVLGYALERVF-HTRLSVGPALEEGGFFYEGDTGRPLSET 177

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +   IE  MQE++    P+ +  +S   A  LF   +   K+ +   +P     T+YR G
Sbjct: 178 DYKSIEIAMQELVKMKMPYQRLTVSKADALRLFGYTEFKSKI-LASKVPENGFCTVYRCG 236

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
              D CRGPH+  TG+VK F  + K + +Y+ G +   +L R+YG ++  Q  LT++   
Sbjct: 237 HLIDPCRGPHLPDTGRVKAF-AVTKNSSSYFEGKAENAVLQRVYGISFPKQTMLTEWKAL 295

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
             E+ +RDHR + R+  LF   E   G  FW   G +I+  L+ + R++ +   +EE+ +
Sbjct: 296 QAEAARRDHRNIGRQQQLFGFHEVSPGSAFWLPHGARIYNALVEFQRKQYRRRGFEEVVS 355

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +    LW  SGHWD Y  NMF +      + +     +KPMNCPGH  ++     SY+
Sbjct: 356 PNMFSSKLWMVSGHWDKYADNMFRI------VVEKEDHGMKPMNCPGHCIMYAMQQHSYK 409

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ELP+R A+FG ++RNE SG+L GL RVR F QDDAH+FC  +Q+  E       +  +Y+
Sbjct: 410 ELPIRYADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCRMDQVQEEIRGALVFLDDVYR 469

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIM---------------------------- 448
             GF+  + K +TRPE ++G++ +WD AE  +                            
Sbjct: 470 TLGFKFFL-KHATRPENKLGTEEMWDQAEAYLRAALNSFCGIPEHLPDPFKEGATFTFDG 528

Query: 449 -------------KGVLDTIKNSSQDRIN-------------TGVLLGEGAFYGPKFE-- 480
                        K   +     ++ +                    G+GAFYGPK +  
Sbjct: 529 RRDTVKKLRALLKKQAANRENKDTEKKEEKDDEWKGPTHAEAWEENTGDGAFYGPKIDIV 588

Query: 481 -----------------YILKDAIGRDWQCGTI-------------QVDFNLP------- 503
                            + L    G  +   T                D N P       
Sbjct: 589 VEDALRRRHQCATVQLDFNLPQRFGLKYTLPTSTVEGGAGAEAKEHHTDPNAPNVGTDAT 648

Query: 504 -------------------SRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
                              +R         + +  PVMIHRA+FGS+ER I I+ E++ G
Sbjct: 649 TTEGKPEAGDECLSSYEKAARELCIDRRLDANQARPVMIHRAIFGSLERCIAILCEHYGG 708

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             PLWLSP Q IV  +++    YA ++ +   +     + D  N T++ KIR   + +  
Sbjct: 709 EWPLWLSPRQVIVIPVSAENTAYATKVRDAFYADGFHADVDSGNATLDKKIRNAEVARYN 768

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            I + G  E   +++ +R   +      SL +    L +
Sbjct: 769 FIFVVGQVEEEAQTVNVRTRDNRRHGTKSLAEVQRWLRE 807


>gi|189219987|ref|YP_001940627.1| Threonyl-tRNA synthetase [Methylacidiphilum infernorum V4]
 gi|189186845|gb|ACD84030.1| Threonyl-tRNA synthetase [Methylacidiphilum infernorum V4]
          Length = 611

 Score =  515 bits (1325), Expect = e-143,   Method: Composition-based stats.
 Identities = 238/609 (39%), Positives = 357/609 (58%), Gaps = 41/609 (6%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           L  +RHS AH++A A+  IWPE Q+A GP +E+GFYYD + +   S  +   IE++M+ I
Sbjct: 4   LEKLRHSAAHVLAAALLEIWPEAQLAAGPPVEEGFYYDVELDHRISPQDFPAIEERMKRI 63

Query: 130 IARDSPFLKQYLSHEKAREL----------FESKKEAYKVEILESIPAKENVTLYRQGEW 179
           I+   PF +  +S E+AR+L                 YK++ILESIP  E +TLY+ G +
Sbjct: 64  ISEKQPFKRIEVSREEARQLGLKGRLGALSERKIPSRYKLDILESIPENEPITLYQNGSF 123

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLC GPHV  TG +K F KL  V+ AY++GD   P L RIYGTA+ T +EL  +L  LE
Sbjct: 124 IDLCAGPHVEDTGSIKSF-KLTHVSSAYYKGDEKNPQLQRIYGTAFFTAKELEDHLKQLE 182

Query: 240 ESEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
           +++KRDHRK+ +E++LF I    G+G+  W  KG  I + L +++  ++ +  Y+ + TP
Sbjct: 183 QAKKRDHRKIGKELELFLIDERVGAGLPLWLPKGAVIRRELQNFLTEELLQRGYQLVYTP 242

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT-------------------FALKP 338
            +    L++ SGH+  YR + F      D +K                       + LKP
Sbjct: 243 HIGSLDLFRTSGHYPYYRESQFPPILDPDELKAFEDKTGSCAELANRLEKGEVGGYLLKP 302

Query: 339 MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE 398
           MNCP H+ +F+   +SYR+LPVR+AEFG+VYR E SG L GL RVRGFTQDDAH+FCT+ 
Sbjct: 303 MNCPMHIRIFDSKPRSYRDLPVRIAEFGTVYRFEKSGELSGLTRVRGFTQDDAHIFCTES 362

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLSTR---PEKRVGSDALWDDAENIMKGVLDTI 455
           Q+  E +   +L+  + +  G      +L  R    EK VGS   W  AE  ++      
Sbjct: 363 QVEGELMDCLDLVKVVIQKVGLLDTKARLGLRGEEKEKYVGSPESWKKAEEGLRRA---- 418

Query: 456 KNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS 515
             +++  I+     GE AFYGPK ++++KDAIGR WQ GT+Q+D+NLP+RF+  YV    
Sbjct: 419 --AAKSGIDFVEEPGEAAFYGPKVDFLVKDAIGRSWQLGTVQLDYNLPARFSLSYVGEDG 476

Query: 516 EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLL 575
           +   PV+IHRA FGS+ERF+ I+IE+++G+ PLWL+P Q  V  ++   + Y ++I  +L
Sbjct: 477 QLHAPVIIHRAPFGSLERFLAILIEHYEGHFPLWLAPEQVRVIPVSDGLIAYGEKIKEIL 536

Query: 576 KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
           + +   +  D +N+T+  KIR   ++K+P ++I G KE     + +R        ++SL 
Sbjct: 537 QQNRFRVSLDRKNDTLGAKIRVAQLQKVPYMLIVGKKEEQMSRVSVRTSKKGNIGEMSLD 596

Query: 636 DAIPILTKE 644
             I ++T E
Sbjct: 597 TFISLITAE 605


>gi|322379034|ref|ZP_08053437.1| threonyl-tRNA synthetase [Helicobacter suis HS1]
 gi|322380800|ref|ZP_08054906.1| threonyl-tRNA synthetase [Helicobacter suis HS5]
 gi|321146804|gb|EFX41598.1| threonyl-tRNA synthetase [Helicobacter suis HS5]
 gi|321148526|gb|EFX43023.1| threonyl-tRNA synthetase [Helicobacter suis HS1]
          Length = 601

 Score =  515 bits (1325), Expect = e-143,   Method: Composition-based stats.
 Identities = 245/607 (40%), Positives = 363/607 (59%), Gaps = 19/607 (3%)

Query: 37  KAVAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAI 96
           + + V   G V DL     E    I     P +L +IRHSCAH++A+A++ ++P+ Q  +
Sbjct: 3   EVIGVKKGGLVLDLQSEDLEAGEAIYFDNSPPALEIIRHSCAHLLAQAIKQLYPDAQFFV 62

Query: 97  GPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEA 156
           GP++++GFYYDF      S D+L  +E KMQEI  +  P LKQ +S ++A E F+   + 
Sbjct: 63  GPVVQEGFYYDFKTASKISEDDLGVVEAKMQEIAKKKHPILKQTMSRQEALERFK--NDP 120

Query: 157 YKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPM 216
            K  ++  I   ++ ++Y QGE+ DLCRGPH+  T  ++ F KL K+AGAY  GD    M
Sbjct: 121 LKHAVMSKI-EGDHFSVYTQGEFEDLCRGPHLPHTALLQHF-KLTKLAGAYLGGDEKAEM 178

Query: 217 LSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKI 275
           L+RIYG A+ T++ L +YLY LEE++KRDHRKL +E+ LF   E+   G+  W   G ++
Sbjct: 179 LTRIYGIAFATKEALKEYLYQLEEAKKRDHRKLGQELGLFCFDENLGAGLPIWLPNGMRL 238

Query: 276 FQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
              L + + + + +  YE +  P++L   LWQ+SGH+ +Y+ NM+       T  D   +
Sbjct: 239 RVRLENLLSKALLQYGYEPVRGPEILKSSLWQKSGHYQNYKENMYF------TTIDEVEY 292

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
            +KPMNC GH+ V+ H L+SYRELP+R  E+G V+R+E SG LHGL+RVR FTQDDAH+F
Sbjct: 293 GIKPMNCVGHIKVYEHALRSYRELPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDAHIF 352

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDT 454
           C  +Q+  E L I      +   FGFE  M +LST+P K +G D +W+ A N +K  L+ 
Sbjct: 353 CRFDQIKTEVLSILEFTKKVMGVFGFEYEM-ELSTKPAKYIGEDHIWEQATNALKQALE- 410

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH 514
                +  I+ G+  G GAFYGPK +  + DAI R WQCGT+QVD NLP+RF   Y N  
Sbjct: 411 -----EHNISFGIDAGGGAFYGPKIDIKITDAIRRKWQCGTVQVDMNLPARFELSYTNET 465

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANL 574
                PVMIHRA+ GS ERFI I+ E++ GN P +++P+Q  +  ++   +EYAQEI + 
Sbjct: 466 GNLEQPVMIHRAILGSFERFIAILTEHYSGNYPFFIAPVQIALVPVSMDQLEYAQEIYHK 525

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           L      +    +NET++ +IR    +KIP I++ G +E ++ S+ IR         +  
Sbjct: 526 LNKRGFFVCMADKNETLSKRIRSLEKQKIPFIVVVGKEEVAQGSLAIRDRALGKQYTMLQ 585

Query: 635 LDAIPIL 641
            +    +
Sbjct: 586 EEFFQSM 592


>gi|332672963|gb|AEE69780.1| threonine--tRNA ligase [Helicobacter pylori 83]
          Length = 612

 Score =  514 bits (1324), Expect = e-143,   Method: Composition-based stats.
 Identities = 235/600 (39%), Positives = 360/600 (60%), Gaps = 21/600 (3%)

Query: 46  KVCDLSDPVR--EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG 103
           KV  LSD ++   G+  I   + P +L VIRHSCAH++A+++++++P+ +  +GP++E+G
Sbjct: 21  KVLGLSDGIKALNGTEPIYFDDSPLALEVIRHSCAHLLAQSLKALYPDAKFFVGPVVEEG 80

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE 163
           FYYDF      S ++L +IE KM+E         K+ L+ E+A E F+   +  K  ++ 
Sbjct: 81  FYYDFKTASKISEEDLPKIEAKMKEFAKLKLAITKEVLTREQALERFK--GDELKHAVMS 138

Query: 164 SIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
            I       +Y+QGE+ DLC+GPH+ +T  +  F    K+AGAY  GD N  ML RIYG 
Sbjct: 139 KISGDA-FGVYQQGEFEDLCKGPHLPNTRFLNHFRLT-KLAGAYLGGDENNEMLIRIYGI 196

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISY 282
           A+ T++ L  YL+ +EE++KRDHRKL  E+ LF   ++ G G+  W  KG ++ + +   
Sbjct: 197 AFATKEGLKDYLFQIEEAKKRDHRKLGMELGLFSFDDEIGVGLPLWLPKGARLRKRIEDL 256

Query: 283 MRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           + + +    YE +  P++L   +W+ SGH+D+Y+ NM+       T  D + + +KPMNC
Sbjct: 257 LSKALLLRGYEPVKGPEILKSDVWKISGHYDNYKENMYF------TTIDEQEYGIKPMNC 310

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
            GH+ V+   L SYR+LP+R  E+G V+R+E SG LHGL+RVR FTQDDAH+FC+ EQ+ 
Sbjct: 311 VGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDAHIFCSFEQIQ 370

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
           +E   I +    I + FGF   M +LSTRP K +G D +W+ A N +K  L       + 
Sbjct: 371 SEVSAILDFTHKIMQAFGFSYEM-ELSTRPAKSIGDDKVWEKATNALKEALK------EH 423

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
           RI+  +  G GAFYGPK +  + DA+ R WQCGTIQVD NLP RF   + N H+    PV
Sbjct: 424 RIDYKIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDMNLPERFKLAFTNEHNHAEQPV 483

Query: 522 MIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLS 581
           MIHRA+ GS ERFI I+ E+F GN P +++P Q  +  I      +A ++   LK H + 
Sbjct: 484 MIHRAILGSFERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHVFALKLKEALKKHDIF 543

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           +E   +N+++N K+R    +KIP+I++ G++E     + IR        K+ L + + ++
Sbjct: 544 VEVLDKNDSLNKKVRLAEKQKIPMILVLGNEEVESEILSIRDREKQAQYKMPLKEFLNMV 603


>gi|254778840|ref|YP_003056945.1| threonyl-tRNA synthetase [Helicobacter pylori B38]
 gi|254000751|emb|CAX28675.1| Threonyl-tRNA synthetase (Threonine--tRNA ligase) (ThrRS)
           [Helicobacter pylori B38]
          Length = 612

 Score =  514 bits (1324), Expect = e-143,   Method: Composition-based stats.
 Identities = 237/615 (38%), Positives = 367/615 (59%), Gaps = 29/615 (4%)

Query: 39  VAVAINGKVCDLSDP----VREG-----SIEIITPED-PRSLAVIRHSCAHIMAEAVQSI 88
           +AV  + ++ DL       + +G       E +  +D P +L VIRHSCAH++A++++++
Sbjct: 6   IAVYKDEQIIDLESAKALGLSDGIKALKGSEPVYFDDSPLALEVIRHSCAHLLAQSLKAL 65

Query: 89  WPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE 148
           +P+ +  +GP++E+GFYYDF      S ++L +IE KM+E         K+ L+ E+A E
Sbjct: 66  YPDAKFFVGPVVEEGFYYDFKTASKISEEDLPKIEAKMKEFAKLKLAITKEILTREQALE 125

Query: 149 LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYW 208
            F+   +  K  ++  I       +Y+QGE+ DLC+GPH+ +T  +  F KL K+AGAY 
Sbjct: 126 RFK--GDELKHAVMSKISGD-IFGVYQQGEFEDLCKGPHLPNTRFLNHF-KLTKLAGAYL 181

Query: 209 RGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIF 267
            GD N  ML RIYG A+ T++ L  YL+ +EE++KRDHRKL  E+ LF   ++ G+G+  
Sbjct: 182 GGDENNEMLIRIYGIAFATKEGLKDYLFQIEEAKKRDHRKLGVELGLFSFDDEIGAGLPL 241

Query: 268 WHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADD 326
           W  KG ++ + +   + R  +   YE +  P++L   +W+ SGH+D+Y+ NM+       
Sbjct: 242 WLPKGARLRKRIEDLLSRALLLRGYEPVKGPEILKSDVWKISGHYDNYKENMYF------ 295

Query: 327 TIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
           T  D + + +KPMNC GH+ V+   L SYR+LP+R  E+G V+R+E SG LHGL+RVR F
Sbjct: 296 TTIDEQEYGIKPMNCVGHIKVYQSTLHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREF 355

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
           TQDDAH+FC+ EQ+ +E   I +    I + FGF   M +LSTRP K +G D +W+ A +
Sbjct: 356 TQDDAHIFCSFEQIQSEVSAILDFTHKIMQAFGFSYEM-ELSTRPAKSIGDDEVWEKATD 414

Query: 447 IMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF 506
            +K  L       + RIN  +  G GAFYGPK +  + DA+ R WQCGTIQVD NLP RF
Sbjct: 415 ALKEALK------EHRINYKIDEGGGAFYGPKIDIKITDALRRKWQCGTIQVDMNLPERF 468

Query: 507 NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVE 566
              + N ++    PVMIHRA+ GS ERFI I+ E+F GN P +++P Q  +  I      
Sbjct: 469 KLAFTNEYNHAEQPVMIHRAILGSFERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHV 528

Query: 567 YAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS 626
           +A ++   LK H + +E   +N+++N K+R    +KIP+I++ G++E     + IR    
Sbjct: 529 FALKLKEELKKHDIFVEVLDKNDSLNKKVRLAEKQKIPMILVLGNEEVETEILSIRDREK 588

Query: 627 TTTQKVSLLDAIPIL 641
               K+ L + + ++
Sbjct: 589 QAQYKMPLKEFLNMV 603


>gi|333028319|ref|ZP_08456383.1| putative threonyl-tRNA synthetase [Streptomyces sp. Tu6071]
 gi|332748171|gb|EGJ78612.1| putative threonyl-tRNA synthetase [Streptomyces sp. Tu6071]
          Length = 580

 Score =  514 bits (1323), Expect = e-143,   Method: Composition-based stats.
 Identities = 236/583 (40%), Positives = 342/583 (58%), Gaps = 35/583 (6%)

Query: 81  MAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQY 140
           MA+AVQ I+PE ++ IGP ++DGFYYDFD E+PF+ ++L  +EKKMQEI  R   F ++ 
Sbjct: 1   MAQAVQEIFPEAKLGIGPPVKDGFYYDFDVEKPFTPEDLKAVEKKMQEIQKRGQRFSRRV 60

Query: 141 LSHEKARELFESKKEAYKVEILESIPA------------KENVTLYRQGE-------WFD 181
           +S + AR   E   E YK+E++                    +T+Y   +       W D
Sbjct: 61  VSEDDARA--ELADEPYKLELIGLKGGSTSEDGSAVEVGGNELTIYDNLDAKTGELCWKD 118

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ +T  +  F KLM+ A AYWRG    PML RIYGTAW ++ EL  +L FL E+
Sbjct: 119 LCRGPHLPTTRLIPAF-KLMRNAAAYWRGSEKNPMLQRIYGTAWPSKDELKAHLDFLAEA 177

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           EKRDHRKL  E+DLF   E+ G G+  +H KG  I + +  Y RR   ++ YE + +P  
Sbjct: 178 EKRDHRKLGNELDLFSFPEEVGPGLAVFHPKGGIIRRAMEDYSRRRHEEEGYEFVYSPHT 237

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L+++SGH D Y   M+     D    +   + LKPMNCP H  +F+   +SYRELP
Sbjct: 238 TKGALFEKSGHLDWYADGMYPPMQLD----EGVDYYLKPMNCPMHNLIFDARGRSYRELP 293

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +RL EFG+VYR E SG +HGL R RGFTQDDAH++CTKEQM  E  K    ++++ +D+G
Sbjct: 294 LRLFEFGTVYRYEKSGVVHGLTRSRGFTQDDAHIYCTKEQMAEELDKTLTFVLNLLRDYG 353

Query: 420 FEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
            +   ++LST+ EK  VGSD +W++A   ++ V +      +  +      G  AFYGPK
Sbjct: 354 LDDFYLELSTKDEKKFVGSDEVWEEATATLQQVAE------KQGLPLVPDPGGAAFYGPK 407

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
                +DAIGR WQ  T+Q+DFNLP RF+  Y  +   +  PVMIHRA+FGSIERF  ++
Sbjct: 408 ISVQARDAIGRTWQMSTVQLDFNLPERFDLSYTAADGSRQRPVMIHRALFGSIERFFAVL 467

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           +E++ G +P WL+P+QA+   +  + V Y +E A   +   L ++ D  ++ +  KIR H
Sbjct: 468 LEHYAGAMPPWLAPVQAVGIPVGDAHVPYLKEFAAEARRKGLRVDVDASSDRMQKKIRNH 527

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
             +K P ++I GD + +  ++  R    +    +   +AI  L
Sbjct: 528 QKQKTPFMVIVGDDDMNAGTVSFRHRDGSQENGIPKDEAIAKL 570


>gi|317008795|gb|ADU79375.1| threonyl-tRNA synthetase [Helicobacter pylori India7]
          Length = 612

 Score =  513 bits (1322), Expect = e-143,   Method: Composition-based stats.
 Identities = 236/600 (39%), Positives = 364/600 (60%), Gaps = 21/600 (3%)

Query: 46  KVCDLSDPVR--EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG 103
           KV  LSD ++  +G+  I   + P +L VIRHSCAH++A+++++++P+ +  +GP++E+G
Sbjct: 21  KVLGLSDGIKALKGTEPIYFDDSPLALEVIRHSCAHLLAQSLKALYPDAKFFVGPVVEEG 80

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE 163
           FYYDF      S ++L +IE KM+E         K+ L+ E+A E F+   +  K  ++ 
Sbjct: 81  FYYDFKTASKISEEDLPKIEAKMKEFAKSKLAITKEVLTREQALERFK--GDELKHAVMS 138

Query: 164 SIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
            I       +Y+QGE+ DLC+GPH+ +T  +  F KL K+AGAY  GD N  ML RIYG 
Sbjct: 139 KISGD-KFGVYQQGEFEDLCKGPHLPNTRFLNHF-KLTKLAGAYLGGDENNEMLIRIYGI 196

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISY 282
           A+ T++ L  YL+ +EE++KRDHRKL  E+ LF   ++ G+G+  W  KG ++ + +   
Sbjct: 197 AFATKEGLKDYLFQIEEAKKRDHRKLGVELGLFSFDDEIGAGLPLWLPKGARLRKRIEDL 256

Query: 283 MRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           + + +    YE +  P++L   +W+ SGH+D+Y+ NM+       T  D + + +KPMNC
Sbjct: 257 LSKALLLRGYEPVKGPEILKSDVWKISGHYDNYKENMYF------TTIDEQEYGIKPMNC 310

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
            GH+ V+   L SYR+LP+R  E+G V+R+E SG LHGL+RVR FTQDDAH+FC+ EQ+ 
Sbjct: 311 VGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDAHIFCSFEQIQ 370

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
           +E   I +    I + FGF   M +LSTRP K +G D +W+ A N +K  L       + 
Sbjct: 371 SEVSTILDFTHKIMQAFGFSYEM-ELSTRPAKSIGDDKVWEKATNALKEALK------EH 423

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
           RI+  +  G GAFYGPK +  + DA+ R WQCGTIQVD NLP RF   + N ++    PV
Sbjct: 424 RIDYKIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDMNLPERFKLAFTNEYNHAEQPV 483

Query: 522 MIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLS 581
           MIHRA+ GS ERFI I+ E+F GN P +++P Q  +  I      +A ++   LK H + 
Sbjct: 484 MIHRAILGSFERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHVFAFKLKEALKKHDIF 543

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           +E   +N+++N K+R    +KIP+I++ G++E     + IR        K+ L + + ++
Sbjct: 544 VEVLDKNDSLNKKVRSAEKQKIPMILVLGNEEVESEILSIRDREKQAQYKMPLKEFLNMV 603


>gi|328947096|ref|YP_004364433.1| threonyl-tRNA synthetase [Treponema succinifaciens DSM 2489]
 gi|328447420|gb|AEB13136.1| threonyl-tRNA synthetase [Treponema succinifaciens DSM 2489]
          Length = 585

 Score =  513 bits (1321), Expect = e-143,   Method: Composition-based stats.
 Identities = 263/581 (45%), Positives = 376/581 (64%), Gaps = 24/581 (4%)

Query: 67  PRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFS--SDELAQIEK 124
              L  IRHSCAH+MAEAV +++P  ++AIGP IE+GFYYDFD  +     +++ A IEK
Sbjct: 4   DEKLQTIRHSCAHVMAEAVLNLFPGTKIAIGPAIENGFYYDFDFPEGHKVCAEDFASIEK 63

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
           +M++II+ +  F+++ +S  +A ELF+   + YK E+++ +P  E +T Y Q  + DLCR
Sbjct: 64  EMRKIISGNHDFIRKEVSKSEALELFK--DQPYKEELIKELPEGEVITTYEQDGYLDLCR 121

Query: 185 GPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           GPHV +T ++ ++ FKLM +AGAYW+GD  RPML+RIY   +    +L  Y+  LEE++K
Sbjct: 122 GPHVANTKEINQQSFKLMSIAGAYWKGDVKRPMLTRIYAVCFYKPNDLKDYITMLEEADK 181

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQ 302
           RDHRKL  ++DLFH+  +  G IFWH  GW ++ TL  YMR KI+ D Y E+NTP ++ +
Sbjct: 182 RDHRKLGVQLDLFHLDPEDPGQIFWHPNGWTMYVTLQDYMREKIRKDGYMEVNTPAIMPR 241

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHW  Y+ NMF       T  + R FA+KPMNCPG + +FN  ++SY++LP+RL
Sbjct: 242 SLWERSGHWGHYQKNMFV------TESEKRMFAIKPMNCPGALEIFNSRVRSYKDLPLRL 295

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFG   RNEPSG+LHG+MRVRGF QDDAH+ CT++Q+ +E  K   L++ +YKDFGF+K
Sbjct: 296 AEFGHCVRNEPSGTLHGIMRVRGFVQDDAHIICTEDQIESEVSKFCRLLLDVYKDFGFDK 355

Query: 423 I-MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
             +VKLST PE  VG    W  AE  +     +        +   +  GEGAFYGPK E+
Sbjct: 356 NLLVKLSTMPEDHVGDLETWQHAEKALAAACKSAG------MEYEIQPGEGAFYGPKLEF 409

Query: 482 ILKDAIGRDWQCGTIQVDFNLP--SRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
            L DA+GR WQCGTIQ+D+ LP   R NA Y+ + ++K HPVM+HRAV GS+ERF+GI+I
Sbjct: 410 TLIDALGRQWQCGTIQLDYQLPSAERLNAEYIGADNQKHHPVMLHRAVLGSLERFLGILI 469

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           EN+ G  P WLS  Q  V  +      YA+++A+ LKS  +       +  +  KI+  S
Sbjct: 470 ENYAGVFPAWLSFEQVAVVPVAPEFNAYAEKVADELKSLGVRANAYTDDSNMKNKIKNIS 529

Query: 600 IK-KIPIIIICGDKEASERSIGIRRFGSTT--TQKVSLLDA 637
            + + P I++ G+KE  E S+  R   S+    +  +L + 
Sbjct: 530 TEHRTPYILVVGEKEQGENSVTCRFRFSSKIPQKTFALKEF 570


>gi|320159528|ref|YP_004172752.1| threonyl-tRNA synthetase [Anaerolinea thermophila UNI-1]
 gi|319993381|dbj|BAJ62152.1| threonyl-tRNA synthetase [Anaerolinea thermophila UNI-1]
          Length = 623

 Score =  513 bits (1320), Expect = e-143,   Method: Composition-based stats.
 Identities = 221/590 (37%), Positives = 356/590 (60%), Gaps = 34/590 (5%)

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           RHSC+HIMA+AV  ++P  + AIGP IEDGFYYDFD  +  + ++L  IEK+M+EII  +
Sbjct: 39  RHSCSHIMAQAVLELFPNAKYAIGPAIEDGFYYDFDLPRTLTPEDLEHIEKRMKEIIKGN 98

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN------------VTLYRQGEWFD 181
             F++Q +S E+AR++F+   + YK+E+++ +   E             +++Y+  ++ D
Sbjct: 99  HDFIRQEVSAEEARQIFK--DQPYKLELIDGLEKGEVDEDGNPLEEKPVISIYKHDKFVD 156

Query: 182 LCRGPHVRSTGQVKK-FFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           LCRGPHV +T ++     KLM+V+GAYWRGD + PML RIYGTAW T +EL QYL+ LEE
Sbjct: 157 LCRGPHVANTREINPKAVKLMQVSGAYWRGDEHNPMLQRIYGTAWETPEELEQYLWRLEE 216

Query: 241 SEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           ++KRDHRKL +E+D++   ++ G G+  W  +G  I + +    +  + K  YE + TP 
Sbjct: 217 AKKRDHRKLGKELDIYLFDDEIGPGLPLWTPRGGAIIEEIEKLAKEMEFKYGYERVRTPH 276

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +  + L+ +SGH   Y  +M+          +   + +KPMNCP H  +F    +SYREL
Sbjct: 277 LAKEDLYLRSGHLPYYAESMYPPMEL-----EGVRYYVKPMNCPMHHKIFASKPRSYREL 331

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           PVRLAE+G+ YR E SG L GLMRVR    +D+H++C++EQ   E + + +L +  ++ F
Sbjct: 332 PVRLAEYGTCYRYEKSGELFGLMRVRSMQMNDSHIYCSEEQFEQEFVGVIHLYLEYFRLF 391

Query: 419 GFEKIMVKLSTRPEK-----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           G +  +++LST   +      V +  LW   E++++  LD       + I    +  E A
Sbjct: 392 GIQDYLMRLSTHHPRGLGKKYVNNPELWRKTEDMVRKALD------NNGIPYVEIADEAA 445

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  +K AIGR++   T QVDF  P RF+  ++N   E+  P++IHRA   + ER
Sbjct: 446 FYGPKIDVQVKSAIGREFTLATNQVDFAQPERFDLKFINEKGEEERPLIIHRAPLSTHER 505

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
            IG ++E++ G  P+WLSP Q  +  IT +  EYA+++   L++  +    D  ++ +N 
Sbjct: 506 LIGFLLEHYAGAFPVWLSPEQVRIIPITDAQNEYAKQLERRLRALEVRATADLDSDRMNA 565

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           KIR+  + KIP +++ G++EA   ++ +R+    T Q +S+ + + +L +
Sbjct: 566 KIRKAQLLKIPYMLVVGEREAQAGAVALRKRDG-TQQTLSVDEFVALLQE 614


>gi|238922273|ref|YP_002935787.1| threonyl-tRNA synthetase [Eubacterium eligens ATCC 27750]
 gi|238873945|gb|ACR73653.1| threonyl-tRNA synthetase [Eubacterium eligens ATCC 27750]
          Length = 591

 Score =  513 bits (1320), Expect = e-143,   Method: Composition-based stats.
 Identities = 217/594 (36%), Positives = 359/594 (60%), Gaps = 25/594 (4%)

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDEL 119
           ++  ++   L  + HSCAH+MA+AV+ ++P  +  +GP++++GFYYD D  +   + D +
Sbjct: 1   MVNFKEDERLNTLNHSCAHVMAQAVKHLYPHAKFWVGPVVKEGFYYDIDLGDNVINDDAI 60

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEK+M++I        ++ +S E+A E+F+   + YK++++  +    N+T+Y QG++
Sbjct: 61  EAIEKEMKKICKEGKKIYRREVSKEEALEMFK--DDMYKLDLISGL-EDGNITVYDQGDF 117

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV +T   K F KL+K +G YW+GD++  ++ RIYG  + T +EL ++L  LE
Sbjct: 118 TDLCRGPHVDNTKLCKNF-KLVKYSGVYWKGDASNHVMQRIYGVCFPTAEELEEHLKLLE 176

Query: 240 ESEKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           E+++RDHRK+ +EM+LF   +  G G+  +  KG+ ++Q L +Y++ K +   Y  + TP
Sbjct: 177 EAKERDHRKIGKEMELFMSDDLIGRGLPMFLPKGYTVWQELENYIKDKERKLGYLHVMTP 236

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            V   +L++ SGHWD Y+ NMF          +  +F L+PMNCP H+ ++ + + SY++
Sbjct: 237 CVGTVNLYKTSGHWDHYKENMFPAMEV-----EGESFVLRPMNCPHHMMIYANKMHSYKD 291

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+ E    +R E SG+L G+ R R F Q+DAH+F T EQ+ +E  K+ +LI   YKD
Sbjct: 292 LPIRIGEIAHDFRFEASGTLKGIERGRHFCQNDAHLFVTPEQIESEFAKVVDLIFETYKD 351

Query: 418 FGFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           F        LS R  +        D +W++AEN ++ VL+ I       I     +GE A
Sbjct: 352 FNITDYRCVLSLRDPEDKVKYHDDDEMWNNAENALRKVLNDIG------IEYTEEIGEAA 405

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  +K AIG ++   T Q+DF LPS+FN  Y++   ++  PV++HRA+ GS++R
Sbjct: 406 FYGPKLDVNVKPAIGNEYTLSTCQLDFCLPSKFNLTYIDKDGQRKTPVVLHRAILGSLDR 465

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVE---YAQEIANLLKSHHLSIETDFRNET 590
           F+  ++E  KGNLPLWL+P+QA +  + +   E   YA  + + L  + + +E D R E 
Sbjct: 466 FMAYILEETKGNLPLWLAPVQATILPVKNEDEELNAYAHGLYDYLADNGIRVEIDERAEK 525

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           + Y++RE  +KKIP +I+ G  EA++ ++  R  G   +  VS  + + +L  E
Sbjct: 526 LGYRVREAQVKKIPYLIVLGKNEAADGTVSYRLHGEQKSTTVSKDEFVAMLKDE 579


>gi|159489562|ref|XP_001702766.1| predicted protein [Chlamydomonas reinhardtii]
 gi|158280788|gb|EDP06545.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 579

 Score =  513 bits (1320), Expect = e-143,   Method: Composition-based stats.
 Identities = 238/590 (40%), Positives = 341/590 (57%), Gaps = 28/590 (4%)

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD--FDKEQPFSSD 117
           E+ T ++  +L  IRHSCAHIMA AVQ ++  VQV +GP  + GF+YD  +  + P +  
Sbjct: 2   ELKTSDESENLLRIRHSCAHIMAMAVQRLFKGVQVTVGPWTDRGFFYDFAWPADSPLTEK 61

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESI--PAKENVTLYR 175
           +L +I+K+M +I+  + PF+K+ +S  +A     ++ E YK+EIL+SI  PA        
Sbjct: 62  DLKKIKKEMAKIMKANLPFVKEEVSPAEAEARIRAQGEPYKLEILQSILQPAGPKPVA-- 119

Query: 176 QGEWFDLCRGPHVRSTGQVKK-FFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
              W+DLC GPHV  TG +     +L  V GAYWRGD    ML+R+YGTAW T ++L  +
Sbjct: 120 --PWWDLCAGPHVERTGDINPDAVELENVTGAYWRGDEANAMLTRVYGTAWETPEQLAAF 177

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGSG-VIFWHRKGWKIFQTLISYMRR-KIKDDYE 292
               EE+ KRDHRKL  E++LF I E   G +++WH  G  +   + S+ +   ++  Y+
Sbjct: 178 KQLKEEAAKRDHRKLGAELNLFSIQESSGGGLVYWHPPGAMVRHLIESFWKELHLQRGYQ 237

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
            + +P +      + SG           V        +  T+ L+PMNCP HV+V+  G 
Sbjct: 238 LVYSPHIA-----KVSGACVC-----VCVCVCVCVCVEDETYQLRPMNCPFHVSVYKDGY 287

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
            SYR+LP+RLAE G+VYR E SG++HGL RVRGFTQDDAH+FC   Q+  E   + +L+ 
Sbjct: 288 YSYRDLPLRLAELGTVYRYERSGTMHGLFRVRGFTQDDAHIFCLPNQITTEIKGVLDLVE 347

Query: 413 SIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
            I   FGF    V LSTRPEK VGSD +W  AE  +   L+             V  G G
Sbjct: 348 EILGTFGFNDYEVNLSTRPEKSVGSDEIWTTAEAALVEALNA------KGWKYQVDAGGG 401

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           AFYGPK +  ++DAIGR WQC T+Q+DFNLP RF+  Y +  + K  P+MIHRA+FGS+E
Sbjct: 402 AFYGPKIDIKIRDAIGRKWQCSTVQLDFNLPERFDMHYFDDAAAKQRPIMIHRAIFGSLE 461

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
           RF GI+IEN+ G  PLWL+P+Q  + T+  +  EYA  +A  ++   + +E      +I 
Sbjct: 462 RFFGILIENYMGAFPLWLAPVQVRLLTVNDNLAEYAHGVAAQMRKAGVRVEV-VGQASIA 520

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             IR     K P+I + G+KEA   S+ +R +G      + + D I  + 
Sbjct: 521 KLIRNAEKAKTPVICVVGNKEAESNSLAVRLYGGKELGALPVQDVISRVA 570


>gi|217031884|ref|ZP_03437386.1| hypothetical protein HPB128_3g3 [Helicobacter pylori B128]
 gi|298736935|ref|YP_003729465.1| threonyl-tRNA synthetase [Helicobacter pylori B8]
 gi|216946353|gb|EEC24958.1| hypothetical protein HPB128_3g3 [Helicobacter pylori B128]
 gi|298356129|emb|CBI67001.1| threonyl-tRNA synthetase [Helicobacter pylori B8]
          Length = 612

 Score =  513 bits (1320), Expect = e-143,   Method: Composition-based stats.
 Identities = 235/600 (39%), Positives = 362/600 (60%), Gaps = 21/600 (3%)

Query: 46  KVCDLSDPVR--EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG 103
           KV  LSD ++  +G+  I   + P +L VIRHSCAH++A+++++++P+ +  +GP++E+G
Sbjct: 21  KVLGLSDGIKALKGTEPIYFDDSPLALEVIRHSCAHLLAQSLKALYPDAKFFVGPVVEEG 80

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE 163
           FYYDF      S ++L +IE KM+E         K+ L+ E+A E F+   +  K  ++ 
Sbjct: 81  FYYDFKTSSKISEEDLPKIEAKMKEFAKSKLAITKETLTREQALERFK--GDELKHAVMS 138

Query: 164 SIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
            I       +Y+QGE+ DLC+GPH+ +T  +  F KL K+AGAY  GD N  ML RIYG 
Sbjct: 139 KISGDA-FGVYQQGEFEDLCKGPHLPNTRFLNHF-KLTKLAGAYLGGDENNEMLIRIYGI 196

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISY 282
           A+ T++ L  YL+ +EE++KRDHRKL  E+ LF   ++ G+G+  W  KG ++ + +   
Sbjct: 197 AFATKEGLKDYLFQIEEAKKRDHRKLGVELGLFSFDDEIGAGLPLWLPKGARLRKRIEDL 256

Query: 283 M-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           + +  +   YE +  P++L   +W+ SGH+D+Y+ NM+       T  D + + +KPMNC
Sbjct: 257 LSQALLLRGYEPVKGPEILKSDVWKISGHYDNYKENMYF------TTIDEQEYGIKPMNC 310

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
            GH+ V+   L SYR+LP+R  E+G V+R+E SG LHGL+RVR FTQDDAH+FC+ EQ+ 
Sbjct: 311 VGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDAHIFCSFEQIQ 370

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
           +E   I +    I K F F   M +LSTRP K +G D +W+ A + +K  L       + 
Sbjct: 371 SEVSAILDFTHKIMKAFNFSYEM-ELSTRPTKSIGDDEVWEKATSALKEALK------EH 423

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
           RI+  +  G GAFYGPK +  + DA+ R WQCGTIQVD NLP RF   + N H+    PV
Sbjct: 424 RIDYKIDEGGGAFYGPKIDIKITDALRRKWQCGTIQVDMNLPERFKLAFTNEHNHAEQPV 483

Query: 522 MIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLS 581
           MIHRA+ GS ERFI I+ E+F GN P +++P Q  +  I      +A ++   LK   + 
Sbjct: 484 MIHRAILGSFERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHVFALKLKEELKKRDIF 543

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           +E   +N+++N K+R    +KIP+I++ G++E     + IR        K+ L + + ++
Sbjct: 544 VEVLDKNDSLNKKVRLAEKQKIPMILVLGNEEVETEILSIRDREKQDQYKMPLKEFLNMV 603


>gi|291519633|emb|CBK74854.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Butyrivibrio
           fibrisolvens 16/4]
          Length = 588

 Score =  513 bits (1320), Expect = e-143,   Method: Composition-based stats.
 Identities = 215/595 (36%), Positives = 354/595 (59%), Gaps = 25/595 (4%)

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPF-SSDEL 119
           ++  ++  SL ++ HSCAH+MA+AV+ ++P  +  +GP++E+GFYYD D      + +++
Sbjct: 1   MVNFKEDESLNMLNHSCAHMMAQAVKHLYPNAKFWVGPVVEEGFYYDMDLGDTMLTDEDV 60

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-ENVTLYRQGE 178
           A IEK+M+++        ++ +S  +A E+F+   + YK++++ ++    + ++ Y QG+
Sbjct: 61  AAIEKEMKKVAKSGCKIYRREISKAEALEMFK--DDPYKIDLINNMDEDTQTISCYDQGD 118

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + DLCRGPHV +    + F KL+K +GAYW+GD+   +L+R+YG  + TQ++L ++L  L
Sbjct: 119 FTDLCRGPHVDNVKLCRYF-KLIKHSGAYWKGDAENQVLNRVYGVCFPTQEQLDEHLALL 177

Query: 239 EESEKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINT 296
           EE+++RDHRK+ ++M LF   +  G G+  +   G+ I+  L +Y+R ++ K  Y  + T
Sbjct: 178 EEAKERDHRKIGKDMQLFMADDLIGRGLPMYLPNGYTIWTELENYIRNKERKLGYLHVMT 237

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P V    L+Q SGHWD Y+ NMF          +  +F L+PMNCP H+ +F +   SY+
Sbjct: 238 PCVGTVQLYQTSGHWDHYKENMFPAMEV-----EGESFVLRPMNCPHHMRIFANRPHSYK 292

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ELP+R+AE    +R E SG+L G+ R R F Q+D+H+FCT+EQ+ +E   + +LI S Y+
Sbjct: 293 ELPIRIAEIAHDFRFESSGTLKGIERGRHFCQNDSHIFCTQEQIKSEVKSVCDLIFSTYE 352

Query: 417 DFGFEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
           DFG       LS R      K    D +W+ AE  ++  L  I       I     +GE 
Sbjct: 353 DFGITDYRCVLSLRDPADTKKYHQDDEMWNTAEQALRETLTEIG------IEFTEEIGEA 406

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           AFYGPK +  +K AIG +    T Q+DF LP++F+  Y ++ S K  PV+IHRA+ GS++
Sbjct: 407 AFYGPKLDVNVKPAIGNEITLSTCQLDFCLPAKFDLTYTDADSNKQTPVVIHRAILGSLD 466

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVE---YAQEIANLLKSHHLSIETDFRNE 589
           RF+  ++E  KGNLPLWL+P Q  V  + +   +   YAQ++ + L    + +E D R+E
Sbjct: 467 RFMAYILEETKGNLPLWLAPTQVKVLPVKNDDADLNAYAQKLVDALADADVRVEFDTRSE 526

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            + YK+RE  I+K+P + + G  E +E ++  R  G   T  V   + + ++  E
Sbjct: 527 KLGYKMREAQIQKVPYLAVLGKNEEAEGTVSYRLHGEHGTTTVKFDEFVELIVNE 581


>gi|295093898|emb|CBK82989.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Coprococcus sp.
           ART55/1]
          Length = 587

 Score =  512 bits (1318), Expect = e-143,   Method: Composition-based stats.
 Identities = 210/595 (35%), Positives = 355/595 (59%), Gaps = 26/595 (4%)

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK--EQPFSSDE 118
           ++  ++   L  + HSCAH+MA+A++ ++P+ +  +GP++ +GFYYD D   +     ++
Sbjct: 1   MVNFKEDEQLKTLNHSCAHLMAQAIKHLYPQAKFWVGPVVAEGFYYDVDLGDDVIRGEED 60

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           LA IEK+M++I       +++ +S E+A E+F+   + YK++++  +     +T Y QG+
Sbjct: 61  LAAIEKEMKKIAKSGKKIIRKEISKEEALEMFK--DDEYKLDLINGL-EDGTITCYEQGD 117

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + DLCRGPHV +    + F KL++ +GAYW+GDS   +L RIYG  + T++EL ++L  L
Sbjct: 118 FTDLCRGPHVDNVKLCRNF-KLIRHSGAYWKGDSKNKVLQRIYGVCFPTKEELEEHLQLL 176

Query: 239 EESEKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINT 296
           EE+++RDHRK+ ++M LF + +  G G+  +  KG+ ++Q L +Y+ R++ K  Y  + T
Sbjct: 177 EEAKERDHRKIGKDMQLFMVDDLVGRGLPMFLPKGYTVWQELENYIKRKERKLGYLHVMT 236

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P V   +L++ SGHWD Y+ NMF          +  +F L+PMNCP H+ ++ + + SY+
Sbjct: 237 PCVGTVNLYKTSGHWDHYKDNMFPAMEM-----EGESFVLRPMNCPHHMMIYANKMHSYK 291

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +LP+R+AE    +R E SG+L G+ R R F Q+D+H+F T +Q+  E   +  LI   YK
Sbjct: 292 DLPIRIAEIAHDFRFEASGTLKGIERGRHFCQNDSHIFVTPDQIEEEFAGVVKLIFDTYK 351

Query: 417 DFGFEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
           DFG       LS R      K    D +W+ AEN ++ VLD I       I+    +GE 
Sbjct: 352 DFGITDYRCVLSLRDPEDKVKYHDDDEMWNKAENALRKVLDDIG------IDYTEEIGEA 405

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           AFYGPK +  +K A+G ++   T Q+DF LP++F+  Y++   EK  PV++HRA+ GS++
Sbjct: 406 AFYGPKLDVNVKPAVGNEYTLSTCQLDFCLPAKFDLKYIDKDGEKKTPVVLHRAILGSLD 465

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVE---YAQEIANLLKSHHLSIETDFRNE 589
           RF+  ++E  KGNLP WL+P+Q  V  + +   +   YA ++ + L +  + +E D R E
Sbjct: 466 RFMAYILEETKGNLPTWLAPVQVRVMPVKTDNEDLMAYAHKVVDALDAIDVRVELDDRAE 525

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            + Y++RE  ++K+P +++ G  EA   ++  R  G   T  + L + +  +  E
Sbjct: 526 KLGYRMREGQVQKVPYLLVIGFNEAENGTVSYRLHGEADTTVLPLDEFVQRIDTE 580


>gi|145594327|ref|YP_001158624.1| threonyl-tRNA synthetase [Salinispora tropica CNB-440]
 gi|145303664|gb|ABP54246.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Salinispora
           tropica CNB-440]
          Length = 671

 Score =  512 bits (1318), Expect = e-143,   Method: Composition-based stats.
 Identities = 238/631 (37%), Positives = 344/631 (54%), Gaps = 40/631 (6%)

Query: 35  AKKAVAVAIN--GKVCDLS-DPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE 91
            + AV V  +  G++ DL   P +E  +E +  + P  LAV+RHS AH++A+AVQ ++PE
Sbjct: 34  GRGAVVVVRDPRGQLRDLDWTPEQETMVEPVGIDTPDGLAVLRHSTAHVLAQAVQDLFPE 93

Query: 92  VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFE 151
            ++ IGP IE+GFYYDF  +QPF  ++L ++EK+MQEII       ++    +      E
Sbjct: 94  AKLGIGPPIENGFYYDFAVDQPFQPEDLTKLEKRMQEIIKSGQR-FRRRRFRDLDEARGE 152

Query: 152 SKKEAYKVEILE---SIPAKENVTLYRQGE---------------WFDLCRGPHVRSTGQ 193
              E +K+E++E          V     GE               W DLCRGPH+ +T  
Sbjct: 153 LAAEPFKLELIELKGDGLDSSQVMEVGGGELTSYDNLAADADKVCWSDLCRGPHLPNTRL 212

Query: 194 VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREM 253
           +  F KLM+ A AYWRG    P L R+YGTAW T+ EL  YL  LEE+ +RDHRKL  ++
Sbjct: 213 IGAF-KLMRSAAAYWRGSEKNPQLQRVYGTAWPTRDELKAYLRLLEEAARRDHRKLGADL 271

Query: 254 DLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHW 311
           DLF   ++ GSG+  +H KG  + +T+  Y+R R I++ ++ + TP +  + L+  SGH 
Sbjct: 272 DLFSFPDEIGSGLPVFHPKGGVLKRTMEDYVRSRHIEEGFDYVGTPHISKEGLFHTSGHL 331

Query: 312 DSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRN 371
             Y   MF          +   + LK MNCP H  ++    +SYRELP+RL EFGSVYR 
Sbjct: 332 PYYADGMFPPMQF-----EGADYYLKAMNCPMHNLIYRSRGRSYRELPMRLFEFGSVYRY 386

Query: 372 EPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR- 430
           E SG +HGL RVRGFTQDD+H +CTKEQ   E   +   ++ + +DFG     ++LSTR 
Sbjct: 387 EKSGVIHGLTRVRGFTQDDSHSYCTKEQAPAEIKHLLAFVLGLLQDFGITDFFLELSTRD 446

Query: 431 ---PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAI 487
              P+K VGS   W  A  +++             +      G  AFYGPK     KDAI
Sbjct: 447 DTKPDKFVGSAEDWATATAVLEQCARDTG------LELVPDPGGAAFYGPKISVQAKDAI 500

Query: 488 GRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           GR WQ  TIQ DFN P+ F   Y  +   +  P+MIH A FGSIERFIG++ E++ G  P
Sbjct: 501 GRTWQMSTIQYDFNQPAGFGLEYQAADGTRQQPIMIHCAKFGSIERFIGVLTEHYAGAFP 560

Query: 548 LWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIII 607
            WL+P+Q +   I +   EY       L++  +  + D  ++ +  KIR    +KIP ++
Sbjct: 561 AWLAPVQVVGIPIRAEHTEYLDGFVAALRAAGIRAQVDAGDDRMQKKIRTAQQQKIPFMV 620

Query: 608 ICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           I GD + +  ++  R    +    V   +A+
Sbjct: 621 IAGDDDVAAGTMSFRYRDGSQRNGVPAAEAV 651


>gi|163814284|ref|ZP_02205673.1| hypothetical protein COPEUT_00435 [Coprococcus eutactus ATCC 27759]
 gi|158449919|gb|EDP26914.1| hypothetical protein COPEUT_00435 [Coprococcus eutactus ATCC 27759]
          Length = 587

 Score =  512 bits (1317), Expect = e-143,   Method: Composition-based stats.
 Identities = 210/595 (35%), Positives = 355/595 (59%), Gaps = 26/595 (4%)

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK--EQPFSSDE 118
           ++  ++   L  + HSCAH+MA+A++ ++P+ +  +GP++ +GFYYD D   +     ++
Sbjct: 1   MVNFKEDEQLKTLNHSCAHLMAQAIKHLYPQAKFWVGPVVAEGFYYDVDLGDDVIRGEED 60

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           LA IEK+M++I       +++ +S E+A E+F+   + YK++++  +     +T Y QG+
Sbjct: 61  LAAIEKEMKKIAKSGKKIIRKEISKEEALEMFK--DDEYKLDLINGL-EDGTITCYEQGD 117

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + DLCRGPHV +    + F KL++ +GAYW+GDS   +L RIYG  + T++EL ++L  L
Sbjct: 118 FTDLCRGPHVDNVKLCRNF-KLIRHSGAYWKGDSKNKVLQRIYGVCFPTKEELEEHLQLL 176

Query: 239 EESEKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINT 296
           EE+++RDHRK+ ++M LF + +  G G+  +  KG+ ++Q L +Y+ R++ K  Y  + T
Sbjct: 177 EEAKERDHRKIGKDMQLFMVDDLVGRGLPMFLPKGYTVWQELENYIKRKERKLGYLHVMT 236

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P V   +L++ SGHWD Y+ NMF          +  +F L+PMNCP H+ ++ + + SY+
Sbjct: 237 PCVGTVNLYKTSGHWDHYKDNMFPAMEM-----EGESFVLRPMNCPHHMMIYANKMHSYK 291

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +LP+R+AE    +R E SG+L G+ R R F Q+D+H+F T +Q+  E   +  LI   YK
Sbjct: 292 DLPIRIAEIAHDFRFEASGTLKGIERGRHFCQNDSHIFVTPDQIEEEFAGVVKLIFDTYK 351

Query: 417 DFGFEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
           DFG       LS R      K    D +W+ AEN ++ VLD I       I+    +GE 
Sbjct: 352 DFGITDYRCVLSLRDPEDKVKYHDDDEMWNKAENALRRVLDDIG------IDYTEEIGEA 405

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           AFYGPK +  +K A+G ++   T Q+DF LP++F+  Y++   EK  PV++HRA+ GS++
Sbjct: 406 AFYGPKLDVNVKPAVGNEYTLSTCQLDFCLPAKFDLKYIDKDGEKKTPVVLHRAILGSLD 465

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVE---YAQEIANLLKSHHLSIETDFRNE 589
           RF+  ++E  KGNLP WL+P+Q  V  + +   +   YA ++ + L +  + +E D R E
Sbjct: 466 RFMAYILEETKGNLPTWLAPVQVRVMPVKTDNEDLMAYAHKVVDALDAIDVRVELDDRAE 525

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            + Y++RE  ++K+P +++ G  EA   ++  R  G   T  + L + +  +  E
Sbjct: 526 KLGYRMREGQVQKVPYLLVIGFNEAENGTVSYRLHGEADTTVLPLDEFVQKIDTE 580


>gi|152993995|ref|YP_001359716.1| threonyl-tRNA synthetase [Sulfurovum sp. NBC37-1]
 gi|166225510|sp|A6QD00|SYT_SULNB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|151425856|dbj|BAF73359.1| threonyl-tRNA synthetase [Sulfurovum sp. NBC37-1]
          Length = 604

 Score =  512 bits (1317), Expect = e-142,   Method: Composition-based stats.
 Identities = 234/603 (38%), Positives = 358/603 (59%), Gaps = 20/603 (3%)

Query: 45  GKVCDLSDPVREGSIEIITPE-DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG 103
           G + D        +   I  +   +SL +IRHS AH+MA+A++ ++P+ Q  +GP++++G
Sbjct: 13  GNIIDTQSAGENCTARPIEFDNSEKSLEIIRHSTAHLMAQAIKELYPDAQFFVGPVVDEG 72

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE 163
           FYYDF   +    ++L  IEKKM+E+I +     K  +S ++A +  +   +  K  +L 
Sbjct: 73  FYYDFRVNEKIGEEDLKTIEKKMKELIKKKYKIEKYEISKDEALK--KFANDDLKQAVLS 130

Query: 164 SIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
            IP  E V++Y+QG++ DLCRGPHV +   +  F KL +VAGAY  GD N  ML+RIYG 
Sbjct: 131 RIP-DETVSIYKQGDFEDLCRGPHVPALRFLHNF-KLTRVAGAYLGGDENAEMLTRIYGI 188

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISY 282
           A+  ++ L  YL  +EE++KRDHRK+  EM+LF   E+   G+ FW  +G K+   L   
Sbjct: 189 AFADKESLKSYLKMMEEAKKRDHRKIGTEMELFMFNEESGAGLPFWMPQGAKLRYKLEQI 248

Query: 283 MRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           + +  +  DYE +  P++L   +W+ SGH+  Y  NM+       T  D + + +KPMNC
Sbjct: 249 LHKAHLVRDYEPVRGPEILKADMWRTSGHYACYGENMYL------TEIDGQEYGIKPMNC 302

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
            GH+ +F    KSYR+LPV+  E+G V+R+E SG LHGL+RVR FTQDDAH+FC  EQ+ 
Sbjct: 303 IGHIQIFKQTQKSYRDLPVKYYEYGVVHRHEKSGVLHGLLRVREFTQDDAHIFCAPEQIA 362

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
           +E L++   + S+ K F FE  M ++ST+PEK +G D +W+ A   +K  L        +
Sbjct: 363 SEVLEVVEFVDSVMKLFEFEYTM-EISTKPEKAIGDDEVWETATQGLKDALK------GN 415

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
            +   +  G GAFYGPK +  + DAIGR WQCGTIQVDFNLP RF+  YV   + +  PV
Sbjct: 416 DLPYTIDEGGGAFYGPKIDIKITDAIGRKWQCGTIQVDFNLPERFDVEYVAEDNSRKRPV 475

Query: 522 MIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLS 581
           M+HRA+ GS ERFIGI+ E++ G  P +++P Q I   I+     YA  +   L    + 
Sbjct: 476 MLHRAILGSFERFIGILTEHYAGEFPFFIAPTQVIFVPISEGHAGYAYGLKKKLMLEGID 535

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            E   +N+++N +IR    +++P ++I GD+E    ++ IR   +     ++  + +  L
Sbjct: 536 SEVSDKNDSLNKRIRTAEKQRVPYVVIIGDEEVQNNTVAIRNRRTREQYNLTQDEFMVEL 595

Query: 642 TKE 644
           TK+
Sbjct: 596 TKQ 598


>gi|297279894|ref|XP_002808285.1| PREDICTED: LOW QUALITY PROTEIN: threonyl-tRNA synthetase,
           mitochondrial-like [Macaca mulatta]
          Length = 669

 Score =  512 bits (1317), Expect = e-142,   Method: Composition-based stats.
 Identities = 210/659 (31%), Positives = 322/659 (48%), Gaps = 77/659 (11%)

Query: 2   PSDIKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           P  IK++ P G  I     + T   +A  IS +LA  AVA  +NG+  DL  P+  +  +
Sbjct: 58  PRTIKISLPGGQKIDAVAWNTTPYQLARQISSTLADTAVAAQVNGEPYDLERPLETDSDL 117

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSS--D 117
             +T + P   AV  HS  H++  A +  +    +  GP  E GFY+DF      +    
Sbjct: 118 RFLTFDSPEGKAVFWHSSTHVLGAAAEQ-FLGAVLCRGPSTEYGFYHDFFLGNGRTVRGS 176

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           EL  +E+  QE+ A   PF +   S                                   
Sbjct: 177 ELPVLERICQELTAAAQPFRRLEAS----------------------------------- 201

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
                            +        + + WR       L R+ G ++ T + L+ +  +
Sbjct: 202 -----------------RXXXXXXXNSSSLWRSSGAPETLQRVSGISFPTTELLSAWEAW 244

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINT 296
            EE+E RDHR++ +E +LF   E   G  F+  +G +++  L++++R +  +  + E+ T
Sbjct: 245 REEAELRDHRRIGKEQELFFFHELSPGSCFFLPRGTRVYNALVAFIRAEYARRGFSEVKT 304

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVK----------CADDTIKDLRT-FALKPMNCPGHV 345
           P +    LW+QSGHW+ Y+ +MFAV+           +DD+ +      ALKPMNCP H 
Sbjct: 305 PTLFSTKLWEQSGHWEHYQEDMFAVQPSGSDRPASSQSDDSTRHTTDILALKPMNCPAHC 364

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +F H  +S+RELP+RLA+FG+++R E SG L GL R+R F QDDAH+FCT +Q+  E  
Sbjct: 365 LMFAHRPRSWRELPLRLADFGALHRAEASGGLGGLTRLRCFQQDDAHIFCTTDQLEAEIQ 424

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
              + + S+Y   GF   +  LSTRP   +G   LWD AE +++  L             
Sbjct: 425 SCLDFLRSVYAVLGFSFRLA-LSTRPSGFLGDPCLWDQAEQVLQRALKEFGEPWD----- 478

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
            +  G+GAFYGPK +  L DA+GR  QCGTIQ+DF LP RF+  Y         PV+IHR
Sbjct: 479 -LNSGDGAFYGPKIDVHLHDALGRPHQCGTIQLDFQLPLRFDLQYKGQAGALERPVLIHR 537

Query: 526 AVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD 585
           AV GS+ER +G++ E+  G  PLWLSP Q +V  + +   EYA+E    L++  L  + D
Sbjct: 538 AVLGSVERLLGVLAESCGGKWPLWLSPFQVVVIPVGTEQEEYAREAQQSLRAAGLVSDLD 597

Query: 586 -FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
                T++ +IR   +       + G KE S+R++ IR   +    +  L +A+  L +
Sbjct: 598 ADSGLTLSRRIRRAQLAHYNFQFVVGQKEQSKRTVNIRTRDNRRLGEWDLPEAVQRLVE 656


>gi|317181405|dbj|BAJ59189.1| threonyl-tRNA synthetase [Helicobacter pylori F57]
          Length = 612

 Score =  512 bits (1317), Expect = e-142,   Method: Composition-based stats.
 Identities = 235/600 (39%), Positives = 361/600 (60%), Gaps = 21/600 (3%)

Query: 46  KVCDLSDPVR--EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG 103
           KV  LSD ++   G+  I   + P +L VIRHSCAH++A+++++++P+ +  +GP++E+G
Sbjct: 21  KVLGLSDGIKALNGTEPIYFDDSPLALEVIRHSCAHLLAQSLKALYPDAKFFVGPVVEEG 80

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE 163
           FYYDF      S ++L +IE KM+E         K+ L+ E+A E F+   +  K  ++ 
Sbjct: 81  FYYDFKTASKISEEDLPKIEAKMKEFAKLKLAITKEVLTREQALERFK--GDELKHAVMS 138

Query: 164 SIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
            I       +Y+QGE+ DLC+GPH+ +T  +  F KL K+AGAY  GD N  ML RIYG 
Sbjct: 139 KISGD-KFGVYQQGEFEDLCKGPHLPNTRFLNHF-KLTKLAGAYLGGDENNEMLIRIYGI 196

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISY 282
           A+ T++ L  YL+ +EE++KRDHRKL  E+ LF   ++ G+G+  W  KG ++ + +   
Sbjct: 197 AFATKEGLKDYLFQIEEAKKRDHRKLGVELGLFSFDDEIGAGLPLWLPKGARLRKRIEDL 256

Query: 283 MRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           + + +    YE +  P++L   +W+ SGH+D+Y+ NM+       T  D + + +KPMNC
Sbjct: 257 LSKALLLRGYEPVKGPEILKSDVWKISGHYDNYKENMYF------TTIDEQEYGIKPMNC 310

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
            GH+ V+   L SYR+LP+R  E+G V+R+E SG LHGL+RVR FTQDDAH+FC+ EQ+ 
Sbjct: 311 VGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDAHIFCSFEQIQ 370

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
           +E   I +    I + F F   M +LSTRP K +G D +W+ A N +K  L       + 
Sbjct: 371 SEVSAILDFTHKIMQAFDFSYEM-ELSTRPAKSIGDDKVWEKATNALKEALK------EH 423

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
           RI+  +  G GAFYGPK +  + DA+ R WQCGTIQVD NLP RF   + N H+    PV
Sbjct: 424 RIDYKIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDMNLPERFKLAFTNEHNHAEQPV 483

Query: 522 MIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLS 581
           MIHRA+ GS ERFI I+ E+F GN P +++P Q  +  I      +A ++   LK   + 
Sbjct: 484 MIHRAILGSFERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHAFALKLKEALKKRDIF 543

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           +E   +N+++N K+R    +KIP+I++ G++E     + IR        K+ L + + ++
Sbjct: 544 VEVLDKNDSLNKKVRLAEKQKIPMILVLGNEEVETEILSIRDREKQAQYKMPLKEFLNMV 603


>gi|217034632|ref|ZP_03440039.1| hypothetical protein HP9810_881g25 [Helicobacter pylori 98-10]
 gi|216942927|gb|EEC22414.1| hypothetical protein HP9810_881g25 [Helicobacter pylori 98-10]
          Length = 612

 Score =  512 bits (1317), Expect = e-142,   Method: Composition-based stats.
 Identities = 235/615 (38%), Positives = 365/615 (59%), Gaps = 29/615 (4%)

Query: 39  VAVAINGKVCDLSDP----VREG-----SIEIITPED-PRSLAVIRHSCAHIMAEAVQSI 88
           +AV  + ++ DL       + +G       E I  +D P +L VIRHSCAH++A++++++
Sbjct: 6   IAVYKDEQIIDLESAKALGLSDGIKALNGTEPIYFDDSPLALEVIRHSCAHLLAQSLKAL 65

Query: 89  WPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE 148
           +P+ +  +GP++E+GFYYDF      S ++L +IE KM+E         K+ L+ E+A E
Sbjct: 66  YPDAKFFVGPVVEEGFYYDFKTASKISEEDLPKIEAKMKEFAKLKLAITKEVLTREQALE 125

Query: 149 LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYW 208
            F+   +  K  ++  I       +Y+QGE+ DLC+GPH+ +T  +  F KL K+AGAY 
Sbjct: 126 RFK--GDELKHAVMSKISGD-KFGVYQQGEFEDLCKGPHLPNTRFLNHF-KLTKLAGAYL 181

Query: 209 RGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIF 267
            GD N  ML RIYG A+ T++ L  YL+ +EE++KRDHRKL  E+ LF   ++ G+G+  
Sbjct: 182 GGDENNEMLIRIYGIAFATKEGLKDYLFQIEEAKKRDHRKLGVELGLFSFDDEIGAGLPL 241

Query: 268 WHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADD 326
           W  KG ++ + +   + + +    YE +  P++L   +W+ SGH+D+Y+ NM+       
Sbjct: 242 WLPKGARLRKRIEDLLSKALLLRGYEPVKGPEILKSDVWKISGHYDNYKENMYF------ 295

Query: 327 TIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
           T  D + + +KPMNC GH+ V+   L SYR+LP+R  E+G V+R+E SG LHGL+RVR F
Sbjct: 296 TTIDEQEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREF 355

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
           TQDDAH+FC+ EQ+ +E   I +    I + F F   M +LSTRP K +G D +W+ A +
Sbjct: 356 TQDDAHIFCSFEQIQSEVSAILDFTHKIMQAFDFSYEM-ELSTRPAKSIGDDKVWEKATS 414

Query: 447 IMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF 506
            +K  L       + RI+  +  G GAFYGPK +  + DA+ R WQCGTIQVD NLP RF
Sbjct: 415 ALKEALK------EHRIDYKIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDMNLPERF 468

Query: 507 NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVE 566
              + N H+    PVMIHRA+ GS ERFI I+ E+F GN P +++P Q  +  I      
Sbjct: 469 KLAFTNEHNHAEQPVMIHRAILGSFERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHV 528

Query: 567 YAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS 626
           +A ++   LK   + +E   +N+++N K+R    +KIP+I++ G++E     + IR    
Sbjct: 529 FALKLKEALKKRDIFVEVLDKNDSLNKKVRLAEKQKIPMILVLGNEEVETEILSIRNREK 588

Query: 627 TTTQKVSLLDAIPIL 641
               K+ L + + ++
Sbjct: 589 QAQYKMPLKEFLNMV 603


>gi|308062983|gb|ADO04870.1| threonyl-tRNA synthetase [Helicobacter pylori Sat464]
          Length = 612

 Score =  512 bits (1317), Expect = e-142,   Method: Composition-based stats.
 Identities = 235/600 (39%), Positives = 362/600 (60%), Gaps = 21/600 (3%)

Query: 46  KVCDLSDPVR--EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG 103
           KV  LSD V+  +G+  I   + P +L VIRHSCAH++A+++++++P+ +  +GP++E+G
Sbjct: 21  KVLGLSDGVKALDGTEPIYFDDSPLALEVIRHSCAHLLAQSLKALYPDAKFFVGPVVEEG 80

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE 163
           FYYDF      S ++L +IE KM+E         K+ L+ E+A E F+   +  K  ++ 
Sbjct: 81  FYYDFKTASKISEEDLPKIEAKMKEFAKLKLAITKEVLTREQALERFK--GDELKHAVMS 138

Query: 164 SIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
            I       +Y+QGE+ DLC+GPH+ +T  +  F KL K+AGAY  GD N  ML RIYG 
Sbjct: 139 KISGDA-FGVYQQGEFEDLCKGPHLPNTRFLNHF-KLTKLAGAYLGGDENNEMLIRIYGI 196

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISY 282
           A+ T++ L  YL+ +EE++KRDHRKL  E+ LF   ++ G+G+  W  KG ++ + +   
Sbjct: 197 AFATKEGLKDYLFQIEEAKKRDHRKLGVELGLFSFDDEIGAGLPLWLPKGARLRKRIEDL 256

Query: 283 MRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           + + +    YE +  P++L   +W+ SGH+D+Y+ NM+       T  D + + +KPMNC
Sbjct: 257 LSKALLLRGYEPVKGPEILKSDVWKISGHYDNYKENMYF------TTIDEQEYGIKPMNC 310

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
            GH+ V+   L SYR+LP+R  E+G V+R+E SG LHGL+RVR FTQDDAH+FC+ EQ+ 
Sbjct: 311 VGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDAHIFCSFEQIQ 370

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
           +E   I +    I + F F   M +LSTRP K +G D +W+ A N +K  L       + 
Sbjct: 371 SEVSAILDFTHKIMQAFDFSYEM-ELSTRPAKSIGDDKVWEKATNALKEALK------EH 423

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
           RI+  +  G GAFYGPK +  + DA+ R WQCGTIQVD NLP RF   + N ++    PV
Sbjct: 424 RIDYKIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDMNLPERFKLAFTNEYNHAEQPV 483

Query: 522 MIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLS 581
           MIHRA+ GS ERFI I+ E+F GN P +++P Q  +  I      +A ++   LK   + 
Sbjct: 484 MIHRAILGSFERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHVFALKLKEALKKRDIF 543

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           +E   +N+++N K+R    +KIP+I++ G++E     + IR        K+ L + + ++
Sbjct: 544 VEVLDKNDSLNKKVRSAEKQKIPMILVLGNEEVETEILSIRDREKQAQYKMPLKEFLNMV 603


>gi|315586098|gb|ADU40479.1| threonine--tRNA ligase [Helicobacter pylori 35A]
 gi|317179509|dbj|BAJ57297.1| threonyl-tRNA synthetase [Helicobacter pylori F30]
          Length = 612

 Score =  512 bits (1317), Expect = e-142,   Method: Composition-based stats.
 Identities = 235/600 (39%), Positives = 361/600 (60%), Gaps = 21/600 (3%)

Query: 46  KVCDLSDPVR--EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG 103
           KV  LSD ++   G+  I   + P +L VIRHSCAH++A+++++++P+ +  +GP++E+G
Sbjct: 21  KVLGLSDGIKALNGTEPIYFDDSPLALEVIRHSCAHLLAQSLKALYPDAKFFVGPVVEEG 80

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE 163
           FYYDF      S ++L +IE KM+E         K+ L+ E+A E F+   +  K  ++ 
Sbjct: 81  FYYDFKTASKISEEDLPKIEAKMKEFAKLKLAITKEVLTREQALERFK--GDELKHAVMS 138

Query: 164 SIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
            I       +Y+QGE+ DLC+GPH+ +T  +  F KL K+AGAY  GD N  ML RIYG 
Sbjct: 139 KISGDA-FGVYQQGEFEDLCKGPHLPNTRFLNHF-KLTKLAGAYLGGDENNEMLIRIYGI 196

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISY 282
           A+ T++ L  YL+ +EE++KRDHRKL  E+ LF   ++ G+G+  W  KG ++ + +   
Sbjct: 197 AFATKEGLKDYLFQIEEAKKRDHRKLGVELGLFSFDDEIGAGLPLWLPKGARLRKRIEDL 256

Query: 283 MRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           + + +    YE +  P++L   +W+ SGH+D+Y+ NM+       T  D + + +KPMNC
Sbjct: 257 LSKALLLRGYEPVKGPEILKSDVWKISGHYDNYKENMYF------TTIDEQEYGIKPMNC 310

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
            GH+ V+   L SYR+LP+R  E+G V+R+E SG LHGL+RVR FTQDDAH+FC+ EQ+ 
Sbjct: 311 VGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDAHIFCSFEQIQ 370

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
           +E   I +    I + F F   M +LSTRP K +G D +W+ A N +K  L       + 
Sbjct: 371 SEVSAILDFTHKIMQAFDFSYEM-ELSTRPAKSIGDDKVWEKATNALKEALK------EH 423

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
           RI+  +  G GAFYGPK +  + DA+ R WQCGTIQVD NLP RF   + N H+    PV
Sbjct: 424 RIDYKIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDMNLPERFKLAFTNEHNHAEQPV 483

Query: 522 MIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLS 581
           MIHRA+ GS ERFI I+ E+F GN P +++P Q  +  I      +A ++   LK   + 
Sbjct: 484 MIHRAILGSFERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHAFALKLKEALKKRDIF 543

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           +E   +N+++N K+R    +KIP+I++ G++E     + IR        K+ L + + ++
Sbjct: 544 VEVLDKNDSLNKKVRLAEKQKIPMILVLGNEEVETEILSIRDREKQAQYKMPLKEFLNMV 603


>gi|111115550|ref|YP_710168.1| threonyl-tRNA synthetase [Borrelia afzelii PKo]
 gi|216263396|ref|ZP_03435391.1| threonyl-tRNA synthetase [Borrelia afzelii ACA-1]
 gi|122956324|sp|Q0SMD6|SYT_BORAP RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|110890824|gb|ABH01992.1| threonyl-tRNA synthetase [Borrelia afzelii PKo]
 gi|215980240|gb|EEC21061.1| threonyl-tRNA synthetase [Borrelia afzelii ACA-1]
          Length = 581

 Score =  512 bits (1317), Expect = e-142,   Method: Composition-based stats.
 Identities = 246/582 (42%), Positives = 363/582 (62%), Gaps = 16/582 (2%)

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
             +    L   RHS AH+MAEAV+ ++P  ++AIGP I+DGFYYDF+ ++  + D L  I
Sbjct: 4   DLDKEDVLYKKRHSIAHVMAEAVRDLFPNTKIAIGPPIKDGFYYDFEFKKQITEDSLLDI 63

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M+EI+   S F K+ +S E+A E+F+   E YK++++++   +  +++Y+   + DL
Sbjct: 64  ENRMREILKTGSSFEKELISVEQALEIFK--DEPYKIDLIKNFDLQNEISIYKSHNFIDL 121

Query: 183 CRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           CRGPHV +  ++  K FKL  +AGAYWRG+    ML+RIYGT WN ++EL  YL   EE 
Sbjct: 122 CRGPHVDNMNKIDPKAFKLTSIAGAYWRGNEKNTMLTRIYGTLWNNEKELRSYLNLREEI 181

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQV 299
           +KRDHRKL +E+DLF I E+ G G++F+H  G KI   +  + R +  K+ Y+ + TP +
Sbjct: 182 KKRDHRKLGKELDLFSIHEEIGPGLVFFHPNGAKIRALIEDFWREEHSKNGYDILFTPHI 241

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               LWQ SGH D Y+ +MF          D   + LKPMNCP H+A++N G  SYR+LP
Sbjct: 242 GKSWLWQTSGHLDFYKDSMFEKMEM-----DKSDYYLKPMNCPFHIAIYNTGKHSYRDLP 296

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
            R AE G+VYR E  G+LHG+MR RGFTQDDAH+ CT  Q+ +E  ++    I ++  FG
Sbjct: 297 FRWAELGTVYRYEKIGALHGIMRARGFTQDDAHIICTHSQVLDEIKEVLRFAIYMWSKFG 356

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F  +   LST+P+K VG+D+ W+ +  +++  L      S   +   +  G GAFYGPK 
Sbjct: 357 FNSLKAYLSTKPDKFVGNDSDWEMSLKVLEEAL------SGFEVPYEIDKGGGAFYGPKI 410

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +  + D++ R+WQ  TIQ DFNLP RFN  Y     ++  P MIHRA+ GSIERF GI+I
Sbjct: 411 DLKIVDSLEREWQMSTIQFDFNLPERFNMTYTAEDGKEKRPFMIHRALLGSIERFFGILI 470

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E++ G  PLWLSPIQA++  + ++  +YA ++ N  K+  + I+ D  +  +N KIRE+ 
Sbjct: 471 EHYGGAFPLWLSPIQAVIIPVNNAVEDYAIKVFNKFKNEGMRIKLDNTSSRMNAKIREYQ 530

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            KKIP + I G++EA E  I IR   +     + L +A+ ++
Sbjct: 531 AKKIPYMFIIGEREAKEEKISIRTRTNEQINGLELDEALKLI 572


>gi|317013544|gb|ADU80980.1| threonyl-tRNA synthetase [Helicobacter pylori Gambia94/24]
          Length = 612

 Score =  512 bits (1317), Expect = e-142,   Method: Composition-based stats.
 Identities = 236/600 (39%), Positives = 361/600 (60%), Gaps = 21/600 (3%)

Query: 46  KVCDLSDPVR--EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG 103
           KV  LSD ++  +GS  I   + P +L VIRHSCAH++A+++++++P+ +  +GP++E+G
Sbjct: 21  KVLGLSDGIKALKGSEPIFFDDSPLALEVIRHSCAHLLAQSLKALYPDAKFFVGPVVEEG 80

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE 163
           FYYDF      S ++L +IE KM+E         K+ L+ E+A E F+   +  K  ++ 
Sbjct: 81  FYYDFKTSSKISEEDLPKIEAKMKEFAKLKLAITKEVLTREQALERFK--GDELKHAVMS 138

Query: 164 SIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
            I       +Y+QGE+ DLC+GPH+ +T  +  F KL K+AGAY  GD N  ML RIYG 
Sbjct: 139 KISGDA-FGVYKQGEFEDLCKGPHLPNTRFLNHF-KLTKLAGAYLGGDENNEMLIRIYGI 196

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISY 282
           A+ T++ L  YL+ +EE++KRDHRKL  E+ LF   ++ G+G+  W  KG ++ + +   
Sbjct: 197 AFATKEGLKDYLFQIEEAKKRDHRKLGVELGLFSFDDEIGAGLPIWLPKGARLRKRIEDL 256

Query: 283 MRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           +   +    YE +  P++L   +W+ SGH+D+Y+ NM+       T  D + + +KPMNC
Sbjct: 257 LSEALLLRGYEPVKGPEILKSDVWKISGHYDNYKENMYF------TTIDEQEYGIKPMNC 310

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
            GH+ V+   L SYR+LP+R  E+G V+R+E SG LHGL+RVR FTQDDAH+FC+ EQ+ 
Sbjct: 311 VGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDAHIFCSFEQIQ 370

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
           +E   I +    I + F F   M +LSTRP K +G D +W+ A N +K  L       + 
Sbjct: 371 SEVSAILDFTHKIMQAFDFSYEM-ELSTRPAKSIGDDEVWEKATNALKEALK------EH 423

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
           RI+  +  G GAFYGPK +  + DA+ R WQCGTIQVD NLP RF   + N H+    PV
Sbjct: 424 RIDYKIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDMNLPERFKLAFTNEHNHAEQPV 483

Query: 522 MIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLS 581
           MIHRA+ GS ERFI I+ E+F GN P +++P Q  +  I      +A ++   LK   + 
Sbjct: 484 MIHRAILGSFERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHVFALKLKEELKKRDIF 543

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           +E   +N+++N K+R    +KIP+I++ G++E     + IR        K+ L + + ++
Sbjct: 544 VEALDKNDSLNKKVRLAEKQKIPMILVLGNEEMETEILSIRDREKQAQYKMPLKEFLNMV 603


>gi|291521022|emb|CBK79315.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Coprococcus
           catus GD/7]
          Length = 585

 Score =  511 bits (1316), Expect = e-142,   Method: Composition-based stats.
 Identities = 213/594 (35%), Positives = 355/594 (59%), Gaps = 25/594 (4%)

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDEL 119
           ++  ++   L ++ HSCAH+MA+A++ ++P+ +  +GP++ +GFYYD D  +     +++
Sbjct: 1   MVNFKEDEQLKMLNHSCAHLMAQAIKHLYPQAKFWVGPVVAEGFYYDVDLGDDVIRDEDI 60

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A IEK+M+++       ++  +S E+A E+F+   + YK++++  +    N++ Y QG++
Sbjct: 61  AAIEKEMKKVAKSGKKIVRHEISKEEALEMFK--DDEYKIDLINGL-EDGNISCYTQGDF 117

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV +    + F KL++ +GAYW+GDS   +L RIYG  + T +EL  +L  LE
Sbjct: 118 TDLCRGPHVDNVKLCRHF-KLLRHSGAYWKGDSKNKVLQRIYGVCFPTAEELEAHLQLLE 176

Query: 240 ESEKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           E+++RDHRK+ ++M+LF + +  G G+  +  KG+ I+Q L +Y++ K +   Y+ + TP
Sbjct: 177 EAKERDHRKIGKDMELFMVDDLVGRGLPMFLPKGYTIWQELENYIKEKERKLGYQHVMTP 236

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            V   +L++ SGHWD Y+ NMF     DD       F L+PMNCP H+ ++ +   SYR+
Sbjct: 237 CVGTVNLYKTSGHWDHYKENMFPAMEVDDEA-----FVLRPMNCPHHMMIYANKRHSYRD 291

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+ E    +R E SG+L G+ R R F Q+DAH+F T EQ+ +E  ++ +LI S Y+D
Sbjct: 292 LPIRIGEIAHDFRYEASGTLKGIERGRHFCQNDAHLFVTPEQIKDEISRVVDLIFSTYED 351

Query: 418 FGFEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           FG       LS R      K    D +W+ AEN ++ V++ +       +     +GE A
Sbjct: 352 FGITDYRCVLSLRDPEDKAKYHDDDEMWNKAENALREVMNELG------LEYTEEIGEAA 405

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  +K A+G +    T Q+DF LP++F   YV+   E   PV++HRA+ GS++R
Sbjct: 406 FYGPKLDVNVKPAVGNEITLSTCQLDFCLPAKFQLTYVDKDGEMKTPVVLHRAILGSLDR 465

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVE---YAQEIANLLKSHHLSIETDFRNET 590
           F+  ++E  KGNLP WL+PIQ  V  + +   +   YA EI  LL++ ++ ++ D R E 
Sbjct: 466 FMAYILEETKGNLPTWLAPIQVKVMPVKTDDDDLNAYANEICELLEAQNVRVDLDDRAEK 525

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           + Y++RE  I+K+P +++ G  E   R++  R  G   T  V L + +  +  E
Sbjct: 526 LGYRMREGQIQKVPYLLVIGFNEKDNRTVSYRLHGEKDTTVVGLDEFVEKIVDE 579


>gi|188526926|ref|YP_001909613.1| threonyl-tRNA synthetase [Helicobacter pylori Shi470]
 gi|238691884|sp|B2URV1|SYT_HELPS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|188143166|gb|ACD47583.1| threonyl-tRNA synthetase [Helicobacter pylori Shi470]
          Length = 612

 Score =  511 bits (1316), Expect = e-142,   Method: Composition-based stats.
 Identities = 235/615 (38%), Positives = 365/615 (59%), Gaps = 29/615 (4%)

Query: 39  VAVAINGKVCDLSDP----VREG-----SIEIITPED-PRSLAVIRHSCAHIMAEAVQSI 88
           +AV  + ++ DL       + +G       E I  +D P +L VIRHSCAH++A++++++
Sbjct: 6   IAVYKDEQIIDLESAKVLGLSDGVKALNGTEPIYFDDSPLALEVIRHSCAHLLAQSLKAL 65

Query: 89  WPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE 148
           +P+ +  +GP++E+GFYYDF      S ++L +IE KM+E         K+ L+ E+A E
Sbjct: 66  YPDAKFFVGPVVEEGFYYDFKTASKISEEDLPKIEAKMKEFAKLKLAITKEVLTREQALE 125

Query: 149 LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYW 208
            F+   +  K  ++  I       +Y+QGE+ DLC+GPH+ +T  +  F KL K+AGAY 
Sbjct: 126 RFK--GDELKHAVMSKISGD-KFGVYQQGEFEDLCKGPHLPNTRFLNHF-KLTKLAGAYL 181

Query: 209 RGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIF 267
            GD N  ML RIYG A+ T++ L  YL+ +EE++KR+HRKL  E+ LF   ++ G+G+  
Sbjct: 182 GGDENNEMLIRIYGIAFATKEGLKDYLFQIEEAKKRNHRKLGVELGLFSFDDEIGAGLPL 241

Query: 268 WHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADD 326
           W  KG ++ + +   + + +    YE +  P++L   +W+ SGH+D+Y+ NM+       
Sbjct: 242 WLPKGARLRKRIEDLLSKALLLRGYEPVKGPEILKSDVWKISGHYDNYKENMYF------ 295

Query: 327 TIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
           T  D + + +KPMNC GH+ V+   L SYR+LP+R  E+G V+R+E SG LHGL+RVR F
Sbjct: 296 TTIDEQEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREF 355

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
           TQDDAH+FC+ EQ+ +E   I +    I + F F   M +LSTRP K +G D +W+ A N
Sbjct: 356 TQDDAHIFCSFEQIQSEVSAILDFTHKIMQAFDFSYEM-ELSTRPAKSIGDDKVWEKATN 414

Query: 447 IMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF 506
            +K  L       + RI+  +  G GAFYGPK +  + DA+ R WQCGTIQVD NLP RF
Sbjct: 415 ALKEALK------EHRIDYKIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDMNLPERF 468

Query: 507 NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVE 566
              + N H+    PVMIHRA+ GS ERFI I+ E+F GN P +++P Q  +  I      
Sbjct: 469 KLAFTNEHNHAEQPVMIHRAILGSFERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHV 528

Query: 567 YAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS 626
           +A ++   LK   + +E   +N+++N K+R    +KIP+I++ G++E     + IR    
Sbjct: 529 FALKLKEALKKRDIFVEVLDKNDSLNKKVRLAEKQKIPMILVLGNEEVETEILSIRDREK 588

Query: 627 TTTQKVSLLDAIPIL 641
               K+ L + + ++
Sbjct: 589 QAQYKMPLKEFLNMV 603


>gi|253744023|gb|EET00284.1| Threonyl-tRNA synthetase [Giardia intestinalis ATCC 50581]
          Length = 695

 Score =  511 bits (1315), Expect = e-142,   Method: Composition-based stats.
 Identities = 233/675 (34%), Positives = 363/675 (53%), Gaps = 48/675 (7%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESI--SRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           + + +T PDG     P  +T  DVA+ I  ++ +  K +A A + +V D+S  + +   +
Sbjct: 27  APLTVTLPDGKTAEVPAASTALDVAKQIIKNKKVYSKFLAAARDDEVIDMSARLGKSCKL 86

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQP--FSSD 117
           E ++ +DPR+  V  HS AH++  A++  + +  +  GP I+ GF+YD   E       +
Sbjct: 87  EFLSFDDPRAKEVFWHSSAHLLGYALEKAF-QAHLGHGPAIDSGFFYDAFFENSLKMEPE 145

Query: 118 ELAQIEKKMQEIIARDS---------PFLKQYLSHEKARELFESKKEAYKVEILES-IPA 167
            L Q++K   EI+ + S          F +  ++ ++A +LF   K   K E++   +  
Sbjct: 146 NLVQLDKTAAEIVKQASAAPGDSPIRRFTRLEVTKQEALDLFSYSK--LKSELISDHVKD 203

Query: 168 KENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNT 227
            E  ++Y+ G++ D CRGPH+     ++ F K M  + AY++GD NR  + R+Y  A+ +
Sbjct: 204 GEMCSVYQCGDFVDFCRGPHIPDLSLIQAF-KCMYSSAAYFKGDQNRESMQRVYAVAFPS 262

Query: 228 QQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI 287
           + +L +++  LEE+++RDHR LA+EMDLF   +   G   +   G +I++ L +++R  +
Sbjct: 263 KDQLDKHIELLEEAKRRDHRNLAKEMDLFMTHKYAPGAPMFMNNGTRIYRKLEAFIRELL 322

Query: 288 KD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA 346
            + DYEE+ TP  L+  LW  SGH   Y+ NMF ++  + T      + LKPMNCP H  
Sbjct: 323 HEFDYEEVMTPTFLNTDLWGISGHLQHYKENMFLLERKEKTDP---QYGLKPMNCPCHCL 379

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           ++     S +ELP+R+AEFG V+RNE SG+L GL RV  F QDDAH+FCT +Q+  E   
Sbjct: 380 LYKSHHHSVQELPIRMAEFGVVHRNELSGALSGLTRVVRFEQDDAHIFCTVDQIEQEMTG 439

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           +   I  +Y  FG     + LS RPEK++GSD LWD AE  ++ VL      +   ++  
Sbjct: 440 LIEFIKRVYTPFG-IAFALSLSLRPEKKMGSDELWDRAEGTLRKVL------TNTGLDFK 492

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLP--SRFNAFYVNSHS-----EKCH 519
              G+GAFYGPK +  L DA+GR  QCGTIQ+DFNLP   RF+  Y          +  H
Sbjct: 493 ENPGDGAFYGPKIDVHLTDALGRQHQCGTIQLDFNLPSKERFDLLYSVYDEKTTSVKYEH 552

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTT-ITSSAVEYAQEIANLLKSH 578
           PVMIHRA+ GS+ERF+ I+IEN  G  P W+SP Q IV          YA+ +     S 
Sbjct: 553 PVMIHRAILGSVERFMAILIENTGGRFPFWISPRQIIVIPLHGEEIATYAKTVRERYHSK 612

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRF------GSTTTQK- 631
              ++ D   E +  KI     KK   I++ G +E    S+ +         G    Q+ 
Sbjct: 613 GYYVDIDMSPEKMEKKIAVAWSKKYNFIMVVGAQEKETGSVALSGRTLSAHIGEKDNQRA 672

Query: 632 ---VSLLDAIPILTK 643
              ++L +   +L +
Sbjct: 673 RKVLTLEETDALLAE 687


>gi|108562547|ref|YP_626863.1| threonyl-tRNA synthetase [Helicobacter pylori HPAG1]
 gi|123247050|sp|Q1CV33|SYT_HELPH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|107836320|gb|ABF84189.1| threonyl-tRNA synthetase [Helicobacter pylori HPAG1]
          Length = 612

 Score =  510 bits (1314), Expect = e-142,   Method: Composition-based stats.
 Identities = 234/600 (39%), Positives = 360/600 (60%), Gaps = 21/600 (3%)

Query: 46  KVCDLSDPVR--EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG 103
           KV  LSD ++   G+  I   + P +L VIRHSCAH++A+++++++P+ +  +GP++E+G
Sbjct: 21  KVLGLSDGIKALNGTEPIYFDDSPLALEVIRHSCAHLLAQSLKALYPDAKFFVGPVVEEG 80

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE 163
           FYYDF      S ++L +IE KM+E         K+ L+ E+A E F+   +  K  ++ 
Sbjct: 81  FYYDFKTASKISEEDLPKIEAKMKEFAKSKLAITKETLTREQALERFK--GDELKHAVMS 138

Query: 164 SIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
            I       +Y+QGE+ DLC+GPH+ +T  +  F KL K+AGAY  GD N  ML RIYG 
Sbjct: 139 KISGD-IFGVYKQGEFEDLCKGPHLPNTRFLNHF-KLTKLAGAYLGGDENNEMLIRIYGI 196

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISY 282
           A+ T++ L  YL+ +EE++KRDHRKL  E+ LF   ++ G+G+  W  KG ++ + +   
Sbjct: 197 AFATKEGLKDYLFQIEEAKKRDHRKLGVELGLFSFDDEIGAGLPLWLPKGARLRKRIEDL 256

Query: 283 M-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           + +  +   YE +  P++L   +W+ SGH+D+Y+ NM+       T  D + + +KPMNC
Sbjct: 257 LSQALLLRGYEPVKGPEILKSDVWKISGHYDNYKENMYF------TTIDEQEYGIKPMNC 310

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
            GH+ V+   L SYR+LP+R  E+G V+R+E SG LHGL+RVR FTQDDAH+FC+ EQ+ 
Sbjct: 311 VGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDAHIFCSFEQIQ 370

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
           +E   I +    I + F F   M +LSTRP K +G D +W+ A N +K  L       + 
Sbjct: 371 SEVSAILDFTHKIMQAFDFSYEM-ELSTRPAKSIGDDEVWEKATNALKEALK------EH 423

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
           RI+  +  G GAFYGPK +  + DA+ R WQCGTIQVD NLP RF   + N  +    PV
Sbjct: 424 RIDYKIDEGGGAFYGPKIDIKITDALRRKWQCGTIQVDMNLPERFKLAFTNERNHAEQPV 483

Query: 522 MIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLS 581
           MIHRA+ GS ERFI I+ E+F GN P +++P Q  +  I      +A ++   LK   + 
Sbjct: 484 MIHRAILGSFERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHVFALKLKEELKKRDIF 543

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           +E   +N+++N K+R    +KIP+I++ G++E     + IR        K+ L + + ++
Sbjct: 544 VEVLDKNDSLNKKVRLAEKQKIPMILVLGNEEVETEILSIRDREKQAQYKMPLKEFLNMV 603


>gi|160943529|ref|ZP_02090762.1| hypothetical protein FAEPRAM212_01020 [Faecalibacterium prausnitzii
           M21/2]
 gi|158445208|gb|EDP22211.1| hypothetical protein FAEPRAM212_01020 [Faecalibacterium prausnitzii
           M21/2]
 gi|295103777|emb|CBL01321.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Faecalibacterium
           prausnitzii SL3/3]
          Length = 594

 Score =  510 bits (1314), Expect = e-142,   Method: Composition-based stats.
 Identities = 213/583 (36%), Positives = 338/583 (57%), Gaps = 21/583 (3%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQIEKKMQE 128
           L VIRH+ AH+MA+A++ ++P+   A GP  E+GFYYD D  +Q  S ++LA IEK+M++
Sbjct: 19  LHVIRHTAAHVMAQAIKRLYPQADFAFGPATENGFYYDVDLGDQKLSDEDLANIEKEMRK 78

Query: 129 IIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           I+  + P     L   +A +L E ++E YKVE +  +  +   + ++QGE+ D+C GPH+
Sbjct: 79  IVKENLPIKPFILPRAEAEKLMEERQEHYKVEHMADLADETEFSFFQQGEYVDMCIGPHL 138

Query: 189 RSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRK 248
             T  +K F K+ + +GAYW+ D    ML+RI G A+  Q+EL  +    +E+ +RDHRK
Sbjct: 139 TYTKALKAF-KITQQSGAYWKNDKENKMLTRINGVAFRNQEELDAWEKEQQEARERDHRK 197

Query: 249 LAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQ 306
           + +EM LF   +  G G+  +   G+ ++Q L +Y++ K +   Y  + TP +   +L++
Sbjct: 198 IGKEMGLFMTDDLVGRGLPMFLPAGYTVWQELENYIKEKERARGYLHVMTPCIGTVNLYK 257

Query: 307 QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFG 366
            SGHWD YR NMF          +  ++ L+PMNCP H+ ++ +   SYR+LP+R+ E  
Sbjct: 258 TSGHWDHYRENMFPAMEM-----EGESYVLRPMNCPHHMMIYANRPHSYRDLPMRIGEIA 312

Query: 367 SVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK 426
             +R E SG+L G+ R R F Q+DAH+FCT EQ+ +E   + +LI  +YKDF        
Sbjct: 313 HDFRYESSGTLKGIERGRHFCQNDAHLFCTPEQIKSEVANVCDLIFEVYKDFNITDYRCV 372

Query: 427 LSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           LS R      K    DA+W+ AE  ++ VL  +       I+    +GE AFYGPK +  
Sbjct: 373 LSLRDPADKKKYHDDDAMWNHAEQALREVLTELG------IHFTEEIGEAAFYGPKLDVN 426

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +K A+G ++   T Q+DF LP++F+  YV+    +  PV++HRA+ GS++RF+  +IE  
Sbjct: 427 VKPAVGAEYTLSTCQLDFCLPAKFHLTYVDKDGSEKTPVVLHRAILGSLDRFMAYLIEET 486

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH-SIK 601
           KG  P WL+P Q  V  ++   +EYAQ++   L    + +  D  N+ I YKIR    + 
Sbjct: 487 KGKFPTWLAPTQVKVLPVSEKTLEYAQDVTEKLSDAGIRVVLDDDNQKIGYKIRAAQQVD 546

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           ++P +++ G KEA   +I +R      T ++SL D I  +T E
Sbjct: 547 RVPYMLVLGAKEAEAGNISVRDRKG-ETAEMSLEDFIAKVTTE 588


>gi|317179928|dbj|BAJ57714.1| threonyl-tRNA synthetase [Helicobacter pylori F32]
          Length = 612

 Score =  510 bits (1314), Expect = e-142,   Method: Composition-based stats.
 Identities = 234/600 (39%), Positives = 360/600 (60%), Gaps = 21/600 (3%)

Query: 46  KVCDLSDPVR--EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG 103
           KV  LSD ++   G+  I   + P +L VIRHSCAH++A+++++++P+ +  +GP++E+G
Sbjct: 21  KVLGLSDGIKALNGTEPIYFDDSPLALEVIRHSCAHLLAQSLKALYPDAKFFVGPVVEEG 80

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE 163
           FYYDF      S ++L +IE KM+E         K+ L+ E+A E F+   +  K  ++ 
Sbjct: 81  FYYDFKTASKISEEDLPKIEAKMKEFAKLKLAITKEVLTREQALERFK--GDELKHAVMS 138

Query: 164 SIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
            I       +Y+QGE+ DLC+GPH+ +T  +  F KL K+AGAY  GD N  ML RIYG 
Sbjct: 139 KISGD-KFGVYQQGEFEDLCKGPHLPNTRFLNHF-KLTKLAGAYLGGDENNEMLIRIYGI 196

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISY 282
           A+ T++ L  YL+ +EE++KRDHRKL  E+ LF   ++ G+G+  W  KG ++ + +   
Sbjct: 197 AFATKEGLKDYLFQIEEAKKRDHRKLGVELGLFSFDDEIGAGLPLWLPKGARLRKRIEDL 256

Query: 283 MRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           + + +    YE +  P++L   +W+ SGH+D+Y+ NM+       T  D + + +KPMNC
Sbjct: 257 LSKALLLRGYEPVKGPEILKSDVWKISGHYDNYKENMYF------TTIDEQEYGIKPMNC 310

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
            GH+ V+   L SYR+LP+R  E+G V+R+E SG LHGL+RVR FTQDDAH+FC+ EQ+ 
Sbjct: 311 VGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDAHIFCSFEQIQ 370

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
           +E   I +    I + F F   M +LSTRP K +G D +W+ A N +K  L       + 
Sbjct: 371 SEVSAILDFTHKIMQAFDFNYEM-ELSTRPAKSIGDDKVWEKATNALKEALK------EH 423

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
           RI+  +  G GAFYGPK +  + DA+ R WQCGTIQVD NLP RF   + N  +    PV
Sbjct: 424 RIDYKIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDMNLPERFKLAFTNERNHAEQPV 483

Query: 522 MIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLS 581
           MIHRA+ GS ERFI I+ E+F GN P +++P Q  +  I      +A ++   LK   + 
Sbjct: 484 MIHRAILGSFERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHVFALKLKEALKKRDIF 543

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           +E   +N+++N K+R    +KIP+I++ G++E     + IR        K+ L + + ++
Sbjct: 544 VEVLDKNDSLNKKVRLAEKQKIPMILVLGNEEVESEILSIRDREKQAQYKMPLKEFLNMV 603


>gi|317011967|gb|ADU82575.1| threonyl-tRNA synthetase [Helicobacter pylori Lithuania75]
          Length = 612

 Score =  510 bits (1314), Expect = e-142,   Method: Composition-based stats.
 Identities = 234/600 (39%), Positives = 361/600 (60%), Gaps = 21/600 (3%)

Query: 46  KVCDLSDPVR--EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG 103
           KV  LSD ++  +G+  I   + P +L VIRHSCAH++A+++++++P+ +  +GP++E+G
Sbjct: 21  KVLGLSDGIKALKGTEPIYFDDSPLALEVIRHSCAHLLAQSLKALYPDAKFFVGPVVEEG 80

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE 163
           FYYDF      S ++L +IE KM+E         K+ L+ E+A E F+   +  K  ++ 
Sbjct: 81  FYYDFKTASKISEEDLPKIEAKMKEFAKSKLAITKEVLTREQALERFK--GDELKHAVMS 138

Query: 164 SIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
            I       +Y+QGE+ DLC+GPH+ +T  +  F KL K+AGAY  GD N  ML RIYG 
Sbjct: 139 KISGDA-FGVYQQGEFEDLCKGPHLPNTRFLNHF-KLTKLAGAYLGGDENNEMLIRIYGI 196

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISY 282
           A+ T++ L  YL+ +EE++KRDHRKL  E+ LF   ++ G+G+  W  KG ++ + +   
Sbjct: 197 AFATKEGLKDYLFQIEEAKKRDHRKLGVELGLFSFDDEIGAGLPLWLPKGARLRKRIEDL 256

Query: 283 MRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           + + +    YE +  P++L   +W+ SGH+D+Y+ NM+       T  D + + +KPMNC
Sbjct: 257 LSKALLLRGYEPVKGPEILKSDVWKISGHYDNYKENMYF------TTIDEQEYGIKPMNC 310

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
            GH+ V+   L SYR+LP+R  E+G V+R+E SG LHGL+RVR FTQDDAH+FC+ EQ+ 
Sbjct: 311 VGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDAHIFCSFEQIQ 370

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
           +E   I +    I + F F   M +LSTRP K +G D +W+ A N +K  L       + 
Sbjct: 371 SEVSAILDFTHKIMQAFDFSYEM-ELSTRPAKSIGDDKVWEKATNALKEALK------EH 423

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
           RI+  +  G GAFYGPK +  + DA+ R WQCGTIQVD NLP RF   + N  +    PV
Sbjct: 424 RIDYKIDEGGGAFYGPKIDIKITDALRRKWQCGTIQVDMNLPERFKLAFTNERNHAEQPV 483

Query: 522 MIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLS 581
           MIHRA+ GS ERFI I+ E+F GN P +++P Q  +  I      +A ++   LK   + 
Sbjct: 484 MIHRAILGSFERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHVFALKLKEALKKRDIF 543

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           +E   +N+++N K+R    +KIP+I++ G++E     + IR        K+ L + + ++
Sbjct: 544 VEVLDKNDSLNKKVRLAEKQKIPMILVLGNEEVETEILSIRDREKQDQYKMPLKEFLNMV 603


>gi|210134324|ref|YP_002300763.1| threonyl-tRNA synthetase [Helicobacter pylori P12]
 gi|238065114|sp|B6JPM2|SYT_HELP2 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|210132292|gb|ACJ07283.1| threonyl-tRNA synthetase [Helicobacter pylori P12]
          Length = 612

 Score =  510 bits (1314), Expect = e-142,   Method: Composition-based stats.
 Identities = 233/600 (38%), Positives = 361/600 (60%), Gaps = 21/600 (3%)

Query: 46  KVCDLSDPVR--EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG 103
           KV  LSD ++   G+  I   + P +L VIRHSCAH++A+++++++P+ +  +GP++E+G
Sbjct: 21  KVLGLSDGIKALNGTEPIYFDDSPLALEVIRHSCAHLLAQSLKALYPDAKFFVGPVVEEG 80

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE 163
           FYYDF      S ++L +IE KM+E         K+ L+ E+A E F+   +  K  ++ 
Sbjct: 81  FYYDFKTASKISEEDLPKIEAKMKEFAKLKLAITKETLTREQALERFK--GDELKHAVMS 138

Query: 164 SIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
            I       +Y+QGE+ DLC+GPH+ +T  +  F KL K+AGAY  GD N  ML RIYG 
Sbjct: 139 KISGDA-FGVYQQGEFEDLCKGPHLPNTRFLNHF-KLTKLAGAYLGGDENNEMLIRIYGI 196

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISY 282
           A+ T++ L  YL+ +EE++KRDHRKL  E+ LF   ++ G+G+  W  KG ++ + +   
Sbjct: 197 AFATKEGLKDYLFQIEEAKKRDHRKLGVELGLFSFDDEIGAGLPLWLPKGARLRKRIEDL 256

Query: 283 M-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           + +  +   YE +  P++L   +W+ SGH+D+Y+ NM+       T  D + + +KPMNC
Sbjct: 257 LSQALLLRGYEPVKGPEILKSDVWKISGHYDNYKENMYF------TTIDEQEYGIKPMNC 310

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
            GH+ V+   L SYR+LP+R  E+G V+R+E SG LHGL+RVR FTQDDAH+FC+ EQ+ 
Sbjct: 311 VGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDAHIFCSFEQIQ 370

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
           +E   I +    I + F F   M +LSTRP K +G D +W+ A + +K  L       + 
Sbjct: 371 SEVSAILDFTHKIMQAFDFSYEM-ELSTRPAKSIGDDEVWEKATSALKEALK------EH 423

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
           RI+  +  G GAFYGPK +  + DA+ R WQCGTIQVD NLP RF   + N  +    PV
Sbjct: 424 RIDYKIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDMNLPERFKLAFTNERNHAEQPV 483

Query: 522 MIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLS 581
           MIHRA+ GS ERFI I+ E+F GN P +++P Q  +  I      +A ++  +LK   + 
Sbjct: 484 MIHRAILGSFERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHVFALKLKEVLKKRDIF 543

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           +E   +N+++N K+R    +KIP+I++ G++E     + IR        K+ L + + ++
Sbjct: 544 VEVLDKNDSLNKKVRLAEKQKIPMILVLGNEEVETEILSIRDREKQAQYKMPLKEFLNMV 603


>gi|15611183|ref|NP_222834.1| threonyl-tRNA synthetase [Helicobacter pylori J99]
 gi|8928389|sp|Q9ZMV3|SYT_HELPJ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|4154621|gb|AAD05692.1| THREONYL-TRNA SYNTHETASE [Helicobacter pylori J99]
          Length = 612

 Score =  510 bits (1314), Expect = e-142,   Method: Composition-based stats.
 Identities = 235/600 (39%), Positives = 363/600 (60%), Gaps = 21/600 (3%)

Query: 46  KVCDLSDPVR--EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG 103
           KV  LSD ++  +G+  I   + P +L VIRHSCAH++A+++++++P+ +  +GP++E+G
Sbjct: 21  KVLGLSDGIKALKGTEPIYFDDSPLALEVIRHSCAHLLAQSLKALYPDAKFFVGPVVEEG 80

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE 163
           FYYDF      S ++L +IE KM+E         K+ L+ E+A E F+   +  K  ++ 
Sbjct: 81  FYYDFKTTSKISEEDLPKIEAKMKEFAKSKLAITKETLTREQALERFK--GDELKHAVMS 138

Query: 164 SIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
            I       +Y+QGE+ DLC+GPH+ +T  +  F KL K+AGAY  GD N  ML RIYG 
Sbjct: 139 KISGD-IFGVYQQGEFEDLCKGPHLPNTRFLNHF-KLTKLAGAYLGGDENNEMLIRIYGI 196

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISY 282
           A+ T++ L  YL+ +EE++KRDHRKL  E+ LF   ++ G+G+  W  KG ++ + +   
Sbjct: 197 AFATKEGLKDYLFQIEEAKKRDHRKLGVELGLFSFDDEIGAGLPLWLPKGARLRKRIEDL 256

Query: 283 M-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           + +  +   YE +  P++L   +W+ SGH+D+Y+ NM+       T  D + + +KPMNC
Sbjct: 257 LSQALLLRGYEPVKGPEILKSDVWKISGHYDNYKENMYF------TTIDEQEYGIKPMNC 310

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
            GH+ V+   L SYR+LP+R  E+G V+R+E SG LHGL+RVR FTQDDAH+FC+ EQ+ 
Sbjct: 311 VGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDAHIFCSFEQIQ 370

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
           +E   I +    I + FGF   M +LSTRP K +G D +W+ A N +K  L       + 
Sbjct: 371 SEVSAILDFTHKIMQAFGFSYEM-ELSTRPAKSIGDDKVWEKATNALKEALK------EH 423

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
           RI+  +  G GAFYGPK +  + DA+ R WQCGTIQVD NLP RF   + N ++    PV
Sbjct: 424 RIDYKIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDMNLPERFKLAFTNEYNHAEQPV 483

Query: 522 MIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLS 581
           MIHRA+ GS ERFI I+ E+F GN P +++P Q  +  I      +A ++   LK   + 
Sbjct: 484 MIHRAILGSFERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHVFALKLKEALKKCDIF 543

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           +E   +N+++N K+R    +KIP+I++ G++E     + IR        K+ L + + ++
Sbjct: 544 VEVLDKNDSLNKKVRLAEKQKIPMILVLGNEEVETEILSIRDREKQAQYKMPLKEFLNMV 603


>gi|308182296|ref|YP_003926423.1| threonyl-tRNA synthetase [Helicobacter pylori PeCan4]
 gi|308064481|gb|ADO06373.1| threonyl-tRNA synthetase [Helicobacter pylori PeCan4]
          Length = 612

 Score =  510 bits (1313), Expect = e-142,   Method: Composition-based stats.
 Identities = 235/615 (38%), Positives = 368/615 (59%), Gaps = 29/615 (4%)

Query: 39  VAVAINGKVCDLSDP----VREG-----SIEIITPED-PRSLAVIRHSCAHIMAEAVQSI 88
           +AV  + ++ DL       + +G       E I  +D P +L VIRHSCAH++A++++++
Sbjct: 6   IAVYKDEQIIDLESAKALGLSDGVKALNGTEPIYFDDSPLALEVIRHSCAHLLAQSLKAL 65

Query: 89  WPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE 148
           +P+ +  +GP++E+GFYYDF      S ++L +IE KM+E         K+ L+ E+A E
Sbjct: 66  YPDAKFFVGPVVEEGFYYDFKTASKISEEDLPKIEAKMKEFAKLKLAITKEVLTREQALE 125

Query: 149 LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYW 208
            F+   +  K  ++  I       +Y+QGE+ DLC+GPH+ +T  +  F KL K+AGAY 
Sbjct: 126 RFK--GDELKHTVMSKISGD-KFGVYQQGEFEDLCKGPHLPNTRFLNHF-KLTKLAGAYL 181

Query: 209 RGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIF 267
            GD N  ML RIYG A+ T++ L  YL+ +EE++KRDHRKL  E+ LF   ++ G+G+  
Sbjct: 182 GGDENNEMLIRIYGIAFATKEGLKDYLFQIEEAKKRDHRKLGVELGLFSFDDEIGAGLPL 241

Query: 268 WHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADD 326
           W  KG ++ + +   + + +    YE +  P++L   +W+ SGH+D+Y+ NM+       
Sbjct: 242 WLPKGARLRKRIEDLLSKALLLRGYEPVKGPEILKSDVWKISGHYDNYKENMYF------ 295

Query: 327 TIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
           T  D + + +KPMNC GH+ V+   L SYR+LP+R  E+G V+R+E SG LHGL+RVR F
Sbjct: 296 TTIDEQEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREF 355

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
           TQDDAH+FC+ EQ+ +E   I +    I + F F   M +LSTRP K +G D +W+ A N
Sbjct: 356 TQDDAHIFCSFEQIQSEVSAILDFTHKIMQAFDFSYEM-ELSTRPAKSIGDDKVWEKATN 414

Query: 447 IMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF 506
            +K  L       + RI+  +  G GAFYGPK +  + DA+ R WQCGTIQVD NLP RF
Sbjct: 415 ALKEALK------EHRIDYKIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDMNLPERF 468

Query: 507 NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVE 566
              + N ++    PVMIHRA+ GS ERFI I+ E+F GN P +++P Q  +  I      
Sbjct: 469 KLAFTNEYNHAEQPVMIHRAILGSFERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHV 528

Query: 567 YAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS 626
           +A ++  +LK  ++ +E   +N+++N K+R    +KIP+I++ G++E    ++ IR    
Sbjct: 529 FALKLKEVLKKRNIFVEVLDKNDSLNKKVRSAEKQKIPMILVLGNEEMETENLSIRDREK 588

Query: 627 TTTQKVSLLDAIPIL 641
               K+ L + + ++
Sbjct: 589 QAQYKMPLKEFLNMV 603


>gi|15644753|ref|NP_206923.1| threonyl-tRNA synthetase [Helicobacter pylori 26695]
 gi|2501057|sp|P56071|SYT_HELPY RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|2313207|gb|AAD07192.1| threonyl-tRNA synthetase (thrS) [Helicobacter pylori 26695]
          Length = 612

 Score =  510 bits (1313), Expect = e-142,   Method: Composition-based stats.
 Identities = 234/600 (39%), Positives = 362/600 (60%), Gaps = 21/600 (3%)

Query: 46  KVCDLSDPVR--EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG 103
           KV  LSD ++   G+  I   + P +L VIRHSCAH++A+++++++P+ +  +GP++E+G
Sbjct: 21  KVLGLSDGIKALNGTEPIYFDDSPLALEVIRHSCAHLLAQSLKALYPDAKFFVGPVVEEG 80

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE 163
           FYYDF      S ++L +IE KM+E         K+ L+ E+A E F+   +  K  ++ 
Sbjct: 81  FYYDFKTSSKISEEDLPKIEAKMKEFAKLKLAITKETLTREQALERFK--GDELKHAVMS 138

Query: 164 SIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
            I   +   +Y+QGE+ DLC+GPH+ +T  +  F KL K+AGAY  GD N  ML RIYG 
Sbjct: 139 KI-GGDAFGVYQQGEFEDLCKGPHLPNTRFLNHF-KLTKLAGAYLGGDENNEMLIRIYGI 196

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISY 282
           A+ T++ L  YL+ +EE++KRDHRKL  E+ LF   ++ G+G+  W  KG ++ + +   
Sbjct: 197 AFATKEGLKDYLFQIEEAKKRDHRKLGVELGLFSFDDEIGAGLPLWLPKGARLRKRIEDL 256

Query: 283 M-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           + +  +   YE +  P++L   +W+ SGH+D+Y+ NM+       T  D + + +KPMNC
Sbjct: 257 LSQALLLRGYEPVKGPEILKSDVWKISGHYDNYKENMYF------TTIDEQEYGIKPMNC 310

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
            GH+ V+   L SYR+LP+R  E+G V+R+E SG LHGL+RVR FTQDDAH+FC+ EQ+ 
Sbjct: 311 VGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDAHIFCSFEQIQ 370

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
           +E   I +    I + F F   M +LSTRP K +G D +W+ A N +K  L       + 
Sbjct: 371 SEVSAILDFTHKIMQAFDFSYEM-ELSTRPAKSIGDDKVWEKATNALKEALK------EH 423

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
           RI+  +  G GAFYGPK +  + DA+ R WQCGTIQVD NLP RF   + N ++    PV
Sbjct: 424 RIDYKIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDMNLPERFKLAFTNEYNHAEQPV 483

Query: 522 MIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLS 581
           MIHRA+ GS ERFI I+ E+F GN P +++P Q  +  I      +A ++   LK   + 
Sbjct: 484 MIHRAILGSFERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHVFALKLKEALKKRDIF 543

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           +E   +N+++N K+R    +KIP+I++ G++E     + IR        K+ L + + ++
Sbjct: 544 VEVLDKNDSLNKKVRLAEKQKIPMILVLGNEEVETEILSIRDREKQDQYKMPLKEFLNMV 603


>gi|317010401|gb|ADU84148.1| threonyl-tRNA synthetase [Helicobacter pylori SouthAfrica7]
          Length = 612

 Score =  510 bits (1313), Expect = e-142,   Method: Composition-based stats.
 Identities = 236/615 (38%), Positives = 364/615 (59%), Gaps = 29/615 (4%)

Query: 39  VAVAINGKVCDLSDP----VREG-----SIEIITPED-PRSLAVIRHSCAHIMAEAVQSI 88
           +AV  + ++ DL       + +G       E I  +D P +L +IRHSCAH++A++++++
Sbjct: 6   IAVYKDEQIIDLESAKVLGLSDGVKALKGTEPIYFDDSPLALEMIRHSCAHLLAQSLKAL 65

Query: 89  WPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE 148
           +P+ +  +GP++E+GFYYDF      S ++L +IE KM+E         K+ L+ E+A E
Sbjct: 66  YPDAKFFVGPVVEEGFYYDFKTASKISEEDLPKIEAKMKEFAKSKLAITKEVLTREQALE 125

Query: 149 LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYW 208
            F+   +  K  ++  I       +Y+QGE+ DLC+GPH+ +T  +  F KL K+AGAY 
Sbjct: 126 RFK--GDELKHAVMSKISGDA-FGVYQQGEFEDLCKGPHLPNTRFLNHF-KLTKLAGAYL 181

Query: 209 RGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIF 267
            GD    ML RIYG A+ T++ L  YL+ +EE++KRDHRKL  E+ LF   ++ G+G+  
Sbjct: 182 GGDEKNEMLIRIYGIAFATKEGLKDYLFQIEEAKKRDHRKLGVELGLFSFDDEIGAGLPL 241

Query: 268 WHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADD 326
           W  KG ++ + +   + + +    YE +  P++L   +W+ SGH+D+Y+ NM+       
Sbjct: 242 WLPKGARLRKRIEDLLSKALLLRGYEPVKGPEILKSDVWKISGHYDNYKENMYF------ 295

Query: 327 TIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
           T  D + + +KPMNC GH+ V+   L SYR+LP+R  E+G V+R+E SG LHGL+RVR F
Sbjct: 296 TTIDEQEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREF 355

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
           TQDDAH+FC+ EQ+ +E   I +    I K F F   M +LSTRP K +G D +W+ A N
Sbjct: 356 TQDDAHIFCSFEQIQSEVSAILDFTHKIMKAFDFSYEM-ELSTRPAKSIGDDKVWEKATN 414

Query: 447 IMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF 506
            +K  L       +  IN  +  G GAFYGPK +  + DA+ R WQCGTIQVD NLP RF
Sbjct: 415 ALKEALK------EHHINYKIDEGGGAFYGPKIDIKITDALRRKWQCGTIQVDMNLPERF 468

Query: 507 NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVE 566
              + N H+    PVMIHRA+ GS ERFI I+ E+F GN P +++P Q  +  I      
Sbjct: 469 KLAFTNEHNNAEQPVMIHRAILGSFERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHG 528

Query: 567 YAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS 626
           +A ++   LK   + +E   +N+++N K+R    +KIP+I++ G++E     + IR    
Sbjct: 529 FALKLKEELKKCDIFVEVLDKNDSLNKKVRLAEKQKIPMILVLGNEEVETEMLSIRDREK 588

Query: 627 TTTQKVSLLDAIPIL 641
            T  K+ L + + ++
Sbjct: 589 QTQYKMPLKEFLNMV 603


>gi|307636813|gb|ADN79263.1| threonyl tRNA sythetase [Helicobacter pylori 908]
 gi|325995402|gb|ADZ50807.1| Threonyl-tRNA synthetase [Helicobacter pylori 2018]
          Length = 612

 Score =  510 bits (1313), Expect = e-142,   Method: Composition-based stats.
 Identities = 236/600 (39%), Positives = 361/600 (60%), Gaps = 21/600 (3%)

Query: 46  KVCDLSDPVR--EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG 103
           KV  LSD ++  +GS  I   + P +L VIRHSCAH++A+++++++P+ +  +GP++E+G
Sbjct: 21  KVLGLSDGIKALKGSEPIFFDDSPLALEVIRHSCAHLLAQSLKALYPDAKFFVGPVVEEG 80

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE 163
           FYYDF      S ++L +IE KM+E         K+ L+ E+A E F+   +  K  ++ 
Sbjct: 81  FYYDFKTSSKISEEDLPKIEAKMKEFAKLKLAIAKEILTREQALERFK--GDELKHAVMS 138

Query: 164 SIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
            I       +Y+QGE+ DLC+GPH+ +T  +  F KL K+AGAY  GD N  ML RIYG 
Sbjct: 139 KISGD-IFGVYKQGEFEDLCKGPHLPNTRFLNHF-KLTKLAGAYLGGDENNEMLIRIYGI 196

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISY 282
           A+ T++ L  YL+ +EE++KRDHRKL  E+ LF   ++ G+G+  W  KG ++ + +   
Sbjct: 197 AFATKEGLKDYLFQIEEAKKRDHRKLGVELGLFSFDDEIGAGLPLWLPKGARLRKRIEDL 256

Query: 283 MRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           + + +    YE +  P++L   +W+ SGH+D+Y+ NM+       T  D + + +KPMNC
Sbjct: 257 LSKALLLRGYEPVKGPEILKSDVWKISGHYDNYKENMYF------TTIDEQEYGIKPMNC 310

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
            GH+ V+   L SYR+LP+R  E+G V+R+E SG LHGL+RVR FTQDDAH+FC+ EQ+ 
Sbjct: 311 VGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDAHIFCSFEQIQ 370

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
           +E   I +    I K F F   M +LSTRP K +G D +W+ A N +K  L       + 
Sbjct: 371 SEVSAILDFTHKIMKAFDFSYEM-ELSTRPAKSIGDDEVWEKATNALKEALK------EH 423

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
           RI+  +  G GAFYGPK +  + DA+ R WQCGTIQVD NLP RF   + N  +    PV
Sbjct: 424 RIDYKIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDMNLPERFKLAFTNERNHAEQPV 483

Query: 522 MIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLS 581
           MIHRA+ GS ERFI I+ E+F GN P +++P Q  +  I      +A ++   LK   + 
Sbjct: 484 MIHRAILGSFERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHVFALKLKEELKKRDIF 543

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           +E   +N+++N K+R    +KIP+I++ G++E     + IR        K+ L + + ++
Sbjct: 544 VEVLDKNDSLNKKVRLAEKQKIPMILVLGNEEVETEILSIRDREKQAQYKMPLKEFLNMV 603


>gi|229828744|ref|ZP_04454813.1| hypothetical protein GCWU000342_00810 [Shuttleworthia satelles DSM
           14600]
 gi|229793338|gb|EEP29452.1| hypothetical protein GCWU000342_00810 [Shuttleworthia satelles DSM
           14600]
          Length = 597

 Score =  510 bits (1313), Expect = e-142,   Method: Composition-based stats.
 Identities = 228/585 (38%), Positives = 345/585 (58%), Gaps = 14/585 (2%)

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
            E    L V RHS AHI+A+AV  ++ PE Q AIGP I+ GFYYDF      + D+  +I
Sbjct: 1   MEREEFLQVYRHSLAHILAKAVIELYGPETQYAIGPQIDTGFYYDFKLPASITEDDFPKI 60

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE-WFD 181
           E KM+EI+ R   F+++ ++ ++A E+   + + YK EI++ +P    +T+Y+ G+ + D
Sbjct: 61  EAKMKEILKRKEDFIREEVTRDQALEI--FRDQKYKTEIIKDLPEDAVITVYKTGDDFTD 118

Query: 182 LCRGPHVRSTGQ-VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           LCRGPHV +  + +   F +   +GAYWRGD     L RIY  A+ +++EL ++   L E
Sbjct: 119 LCRGPHVDNAKELMSAAFAIRSTSGAYWRGDEKNDTLQRIYVDAFPSKEELKEHQRLLRE 178

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           +++RDH+KL   ++LF   E   G+ +W  +GWK+F  L+ Y R    + +Y EI  P +
Sbjct: 179 AKERDHKKLGPALELFMFHESAPGMPYWLPRGWKLFNALLDYWRSVHERHNYLEIAAPVI 238

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +Q LW  SGHW  Y+ NMF +    +   D   +A KPMNCP  +  + +GL+SYR+LP
Sbjct: 239 NNQKLWATSGHWGHYKENMFIIPGEKEDESDY--YAAKPMNCPNAIMFYKNGLRSYRDLP 296

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
            R+++   ++R E SG L+GL RV+ F QDDAH+  T++Q+ +E   I ++   IY  FG
Sbjct: 297 FRVSQVDVIHRKEKSGELNGLFRVQMFRQDDAHILVTEDQIASEIADIMSIADEIYSTFG 356

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
                 +LSTRP+  +G  A WD AE  ++ +LD +        N  V  G+GAFYGPK 
Sbjct: 357 L-SFRAELSTRPDDFMGDIATWDKAEAELREILDNMYGEG----NYDVNEGDGAFYGPKI 411

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +  +KDA+GR+WQ GTIQ+DF LP  F   Y      +  PV+IHRA+FGS+ERFIGI+I
Sbjct: 412 DLQMKDALGREWQMGTIQLDFQLPLNFGLKYAAQDGSEKQPVLIHRAIFGSMERFIGILI 471

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           ENFKG+ P W+SP Q  +  I +S   YA++I   L+S  + +E D+ ++ +N KI+   
Sbjct: 472 ENFKGSFPFWVSPYQVGIVPIRTSHNAYAEKIQEELRSMGIRVEADYADKNMNEKIKRFR 531

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTT-QKVSLLDAIPILTK 643
             + P  ++ GDKE    ++ +   G       + L D   +  K
Sbjct: 532 TLRDPYTLVIGDKEVENGTVSVTVRGQKQQIHDLPLADFCAMCRK 576


>gi|145348306|ref|XP_001418593.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144578823|gb|ABO96886.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 564

 Score =  510 bits (1313), Expect = e-142,   Method: Composition-based stats.
 Identities = 238/567 (41%), Positives = 345/567 (60%), Gaps = 18/567 (3%)

Query: 81  MAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQY 140
           MA AVQ ++P  Q  IGP I+ GFYYDF   + F+  ++ +I+K+M +II +D P  ++ 
Sbjct: 1   MAMAVQKVFPSAQCTIGPWIDRGFYYDFYYPEGFTDQDMKKIQKEMYKIIRKDYPLRREE 60

Query: 141 LSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE-WFDLCRGPHVRSTGQV-KKFF 198
           +S E+A        E YK+EILE+I   E +T+Y  G+ W+DLC GPHV STG++ +K F
Sbjct: 61  VSREEAERRIREINEPYKLEILEAIK-TEPITIYHIGDEWWDLCAGPHVESTGKLDQKAF 119

Query: 199 KLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI 258
            L  +AGAYWRGD  +PML RIYGTAW  + +L  Y  F  E+++RDHR + +++ LF +
Sbjct: 120 ALESLAGAYWRGDETKPMLQRIYGTAWENEAQLQAYNDFKAEAKRRDHRTIGKDLGLFSL 179

Query: 259 AEDG--SGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYR 315
            +D    G++FWH KG  +   + +Y +   +   YE + +P V  Q LW+ SGH D Y 
Sbjct: 180 QQDNAGGGLVFWHPKGAHMRHMIETYWKDLHLARGYELLYSPHVARQELWKTSGHSDFYS 239

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            NM+     +D +     + LKPMNCP H+ V+  G  SY++LP+R AE G+VYR E SG
Sbjct: 240 ENMYQPIKVEDEM-----YQLKPMNCPFHIVVYQDGYYSYKDLPIRWAELGTVYRYERSG 294

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
           ++HGL RVRGFTQDDAH+FC  +Q+ +E   + +L   I   FGF++  V LSTRPEK V
Sbjct: 295 TMHGLFRVRGFTQDDAHIFCLPDQITDEIKSVLDLTEEILSTFGFKEFEVNLSTRPEKSV 354

Query: 436 GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGT 495
           G D +WD AE  +K  L           +  V  G GAFYGPK +  + DAIGR WQC T
Sbjct: 355 GDDKIWDTAEGALKDALQ------MKGWDYIVDDGGGAFYGPKIDIKILDAIGRKWQCST 408

Query: 496 IQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQA 555
           +Q+DFNLP RF+  YV+  + K  P+MIHRA+FGS+ERF GI+ EN+ G  PLWL+PIQ 
Sbjct: 409 VQLDFNLPERFDLSYVDRENAKQRPIMIHRAIFGSLERFFGILTENYAGEFPLWLAPIQV 468

Query: 556 IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEAS 615
            +  +T    +Y + +A  L+   + +E     + +   +R     KIP++ + G +EA 
Sbjct: 469 RLLPVTDEVSDYTEGVAKKLRDAGVRVEI-CTGQRLAKLVRTAEKAKIPVMAVVGREEAE 527

Query: 616 ERSIGIRRFGSTTTQKVSLLDAIPILT 642
             ++ +R F       +S+ + +  +T
Sbjct: 528 NNTLAVRTFKDGDVGTLSVDEVLSRVT 554


>gi|39725443|emb|CAE45679.1| Threonyl-tRNA synthetase [Streptomyces parvulus]
          Length = 675

 Score =  510 bits (1312), Expect = e-142,   Method: Composition-based stats.
 Identities = 225/657 (34%), Positives = 355/657 (54%), Gaps = 41/657 (6%)

Query: 13  SIKNFPVHATGSD-VAESISRSLAKKAVAVAIN--GKVCDLS-DPVREGSIEIITPEDPR 68
           ++   P   T +D V  +        A+ V  +  G + DL   P  +  +E +      
Sbjct: 13  AVVVVPAGTTCADAVTAAKLPRNGPNAIVVVRDPSGALRDLDWTPDSDVEVEAVALSSED 72

Query: 69  SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQE 128
            L V+RHS AH++A+AVQ +WPE ++ IGP IE+GFYYDFD E+PF  ++L ++E++M+E
Sbjct: 73  GLTVLRHSTAHVLAQAVQQLWPEARLGIGPPIENGFYYDFDVERPFQPEDLERVEQRMKE 132

Query: 129 IIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPA----------KENVTLY---- 174
           II     F ++     +A    E  KE YK+E+++                ++T+Y    
Sbjct: 133 IIKSGQRFCRREFPDREA-ARAELAKEPYKLELVDLKGDVDAAEAMEVGGSDLTIYDNLD 191

Query: 175 -RQGE--WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQEL 231
            R G+  W DLCRGPH+ ST  +  F KL++ A AYWRG    P L RIYGTAW T+ EL
Sbjct: 192 ARTGDVCWSDLCRGPHLPSTRLIPAF-KLLRNAAAYWRGSEKNPQLQRIYGTAWPTRDEL 250

Query: 232 TQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKD 289
             +L  LEE+ KRDHR++  E+DLF   ++ G G+  W   G  I   L  + R+ + K 
Sbjct: 251 KSHLAALEEAAKRDHRRIGEELDLFAFNKEIGRGLPLWLPNGAIIRDELEDWARKTERKL 310

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
            Y+ + TP +  + L+  SGH   Y  +++A         D   + LKPMNCP H  V+ 
Sbjct: 311 GYKRVVTPHITQEDLYYLSGHLPYYAEDLYAPIDI-----DGEKYYLKPMNCPHHHMVYK 365

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
               SYR+LP ++AE+G+VYR E SG LHG+MR RGF+Q+DAH++CT +Q  ++ L++  
Sbjct: 366 ARPHSYRDLPYKVAEYGTVYRFERSGQLHGMMRTRGFSQNDAHIYCTADQAKDQFLEVMR 425

Query: 410 LIISIYKDFGFEKIMV----KLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
           +    Y+  G     +    + S   +K    + +W+DAE I +  ++      +  I  
Sbjct: 426 MHADYYRTLGISDFYMVLALRDSANKDKYHDDEQMWEDAERITREAME------ESDIPF 479

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
            + LG  A YGPK +++++   G+++   T QVD   P RF   Y +S   +   V+IHR
Sbjct: 480 QIDLGGAAHYGPKVDFMIRAVTGKEFAASTNQVDLYTPQRFGLTYHDSDGTEKPVVVIHR 539

Query: 526 AVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD 585
           A  GS ERF   + E+F G  P+WL+P Q  +  I     +YA+E+ ++L    +  + D
Sbjct: 540 APLGSHERFTAYLTEHFAGAFPVWLAPEQVRIIPIVEELTDYAEEVRDMLLDADVRADVD 599

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             +  +N K+R    +KIP++++ G +EA +R++ +R      T  +SL   +  +T
Sbjct: 600 AGDGRLNAKVRAAVTRKIPLVVVVGRREAEQRTVTVRDRSGEET-PMSLEKFVAHVT 655


>gi|109947952|ref|YP_665180.1| threonyl-tRNA synthetase [Helicobacter acinonychis str. Sheeba]
 gi|123362536|sp|Q17VZ5|SYT_HELAH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|109715173|emb|CAK00181.1| thrS [Helicobacter acinonychis str. Sheeba]
          Length = 612

 Score =  509 bits (1311), Expect = e-142,   Method: Composition-based stats.
 Identities = 236/600 (39%), Positives = 360/600 (60%), Gaps = 21/600 (3%)

Query: 46  KVCDLSDPVR--EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG 103
           KV  LSD V+  +GS  I   + P +L VIRHSCAH++A+++++++P+ +  +GP++E+G
Sbjct: 21  KVLGLSDGVKALKGSEPIYFDDSPLALEVIRHSCAHLLAQSLKALYPDAKFFVGPVVEEG 80

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE 163
           FYYDF      S ++L +IE KM+E         K+ L+ E+A E F+   +  K  ++ 
Sbjct: 81  FYYDFKTASKISEEDLPKIEAKMKEFAKSKLAITKEVLTKEQALERFK--GDELKHAVMS 138

Query: 164 SIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
            I       +Y+QG + DLC+GPH+ +T  +  F KL K+AGAY  GD    ML RIYG 
Sbjct: 139 KISGDA-FGVYQQGGFEDLCKGPHLPNTRFLNHF-KLTKLAGAYLGGDEKNEMLIRIYGI 196

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISY 282
           A+ T++ L  YL+ +EE++KRDHRKL  E+ LF   ++ G+G+  W  KG ++ + +   
Sbjct: 197 AFATKEGLKDYLFQIEEAKKRDHRKLGVELGLFSFDDEIGAGLPLWLPKGARLRKRIEDL 256

Query: 283 MRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           + + +    YE +  P++L   +W+ SGH+D+Y+ NM+       T  D + + +KPMNC
Sbjct: 257 LSKALLLRGYEPVKGPEILKSDVWKISGHYDNYKENMYF------TTIDEQEYGIKPMNC 310

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
            GH+ V+   L SYR+LP+R  E+G V+R+E SG LHGL+RVR FTQDDAH+FC+ EQ+ 
Sbjct: 311 VGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDAHIFCSFEQIQ 370

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
           +E   I +    I K F F   M +LSTRP K +G D +W+ A N +K  L       + 
Sbjct: 371 SEVSAILDFTHKIMKAFDFSYEM-ELSTRPAKSIGDDKVWEKATNALKEALK------EH 423

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
            IN  +  G GAFYGPK +  + DA+ R WQCGTIQVD NLP RF   + N H+    PV
Sbjct: 424 HINYKIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDMNLPERFKLAFTNEHNNAEQPV 483

Query: 522 MIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLS 581
           MIHRA+ GS ERFI I+ E+F GN P +++P Q ++  I      +A ++   LK   + 
Sbjct: 484 MIHRAILGSFERFIAILSEHFWGNFPFFVAPTQIVLIPINEEHHVFALKLKEELKKRDIF 543

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           +E   +N+++N K+R    +KIP+I++ G++E     + IR        K+ L + + ++
Sbjct: 544 VEVLDKNDSLNKKVRLAEKQKIPMILVLGNEEMETEILSIRDREKQAQYKMPLKEFLNMV 603


>gi|208434081|ref|YP_002265747.1| threonyl-tRNA synthetase [Helicobacter pylori G27]
 gi|238065115|sp|B5Z9Q1|SYT_HELPG RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|208432010|gb|ACI26881.1| threonyl-tRNA synthetase [Helicobacter pylori G27]
          Length = 612

 Score =  509 bits (1311), Expect = e-142,   Method: Composition-based stats.
 Identities = 232/600 (38%), Positives = 361/600 (60%), Gaps = 21/600 (3%)

Query: 46  KVCDLSDPVR--EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG 103
           KV  LSD ++  +G+  I   + P +L VIRHSCAH++A+++++++P+ +  +GP++E+G
Sbjct: 21  KVLGLSDGIKALKGTEPIYFDDSPLALEVIRHSCAHLLAQSLKALYPDAKFFVGPVVEEG 80

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE 163
           FYYDF      S ++L +IE KM+E         K+ L+ E+A E F+   +  K  ++ 
Sbjct: 81  FYYDFKTASKISEEDLPKIEAKMKEFAKLKLAITKEVLTREQALERFK--GDELKHAVMS 138

Query: 164 SIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
            I       +Y+QGE+ DLC+GPH+ +T  +  F KL K+AGAY  GD +  ML RIYG 
Sbjct: 139 KISGDA-FGVYQQGEFEDLCKGPHLPNTRFLNHF-KLTKLAGAYLGGDESNEMLIRIYGI 196

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISY 282
           A+ T++ L  YL+ +EE++KRDHRKL  E+ LF   ++ G+G+  W  KG ++ + +   
Sbjct: 197 AFATKEGLKDYLFQIEEAKKRDHRKLGVELGLFSFDDEIGAGLPLWLPKGARLRKRIEDL 256

Query: 283 MRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           + + +    YE +  P++L   +W+ SGH+D+Y+ NM+       T  D + + +KPMNC
Sbjct: 257 LSKALLLRGYEPVKGPEILKSDVWKISGHYDNYKENMYF------TTIDEQEYGIKPMNC 310

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
            GH+ V+   L SYR+LP+R  E+G V+R+E SG LHGL+RVR FTQDDAH+FC+ EQ+ 
Sbjct: 311 VGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDAHIFCSFEQIQ 370

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
           +E   I +    I + F F   M +LSTRP K +G D +W+ A + +K  L       + 
Sbjct: 371 SEVSAILDFTHKIMQAFDFSYEM-ELSTRPAKSIGDDKVWEKATSALKEALK------EH 423

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
           RI+  +  G GAFYGPK +  + DA+ R WQCGTIQVD NLP RF   + N  +    PV
Sbjct: 424 RIDYKIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDMNLPERFKLAFTNERNHAEQPV 483

Query: 522 MIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLS 581
           MIHRA+ GS ERFI I+ E+F GN P +++P Q  +  I      +A ++   LK   + 
Sbjct: 484 MIHRAILGSFERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHVFALKLKEALKKRDIF 543

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           +E   +N+++N K+R    +KIP+I++ G++E     + IR        K+ L + + ++
Sbjct: 544 VEVLDKNDSLNKKVRLAEKQKIPMILVLGNEEVETEILSIRDREKQAQYKMPLKEFLSMV 603


>gi|261837575|gb|ACX97341.1| threonyl-tRNA synthetase [Helicobacter pylori 51]
          Length = 612

 Score =  509 bits (1311), Expect = e-142,   Method: Composition-based stats.
 Identities = 234/615 (38%), Positives = 364/615 (59%), Gaps = 29/615 (4%)

Query: 39  VAVAINGKVCDLSDP----VREG-----SIEIITPED-PRSLAVIRHSCAHIMAEAVQSI 88
           +AV  + ++ DL       + +G       E I  +D P +L VIRHSCAH++A++++++
Sbjct: 6   IAVYKDEQIIDLESAKVLGLSDGVKALNGTEPIYFDDSPLALEVIRHSCAHLLAQSLKAL 65

Query: 89  WPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE 148
           +P+ +  +GP++E+GFYYDF      S ++L +IE KM+E         K+ L+ E+A E
Sbjct: 66  YPDAKFFVGPVVEEGFYYDFKTASKISEEDLPKIEAKMKEFAKLKLAITKEVLTREQALE 125

Query: 149 LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYW 208
            F+   +  K  ++  I       +Y+QGE+ DLC+GPH+ +T  +  F KL K+AGAY 
Sbjct: 126 RFK--GDELKHAVMSKISGD-KFGVYQQGEFEDLCKGPHLPNTRFLNHF-KLTKLAGAYL 181

Query: 209 RGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIF 267
            GD N  ML RIYG A+ T++ L  YL+ +EE++KRDHRKL  E+ LF   ++ G+G+  
Sbjct: 182 GGDENNEMLIRIYGIAFATKEGLKDYLFQIEEAKKRDHRKLGVELGLFGFDDEIGAGLPL 241

Query: 268 WHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADD 326
           W  KG ++ + +   + + +    YE +  P++L   +W+ SGH+D+Y+ NM+       
Sbjct: 242 WLPKGARLRKRIEDLLSKALLLRGYEPVKGPEILKSDVWKISGHYDNYKENMYF------ 295

Query: 327 TIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
           T  D + + +KPMNC GH+ V+   L SYR+LP+R  E+G V+R+E SG LHGL+RVR F
Sbjct: 296 TTIDEQEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREF 355

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
           TQDDAH+FC+ EQ+ +E   I +    I + F F   M +LSTRP K +G D +W+ A +
Sbjct: 356 TQDDAHIFCSFEQIQSEVSAILDFTHKIMQAFDFSYEM-ELSTRPAKSIGDDKVWEKATS 414

Query: 447 IMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF 506
            +K  L       + RI+  +  G GAFYGPK +  + DA+ R WQCGTIQVD NLP RF
Sbjct: 415 ALKEALK------EHRIDYKIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDMNLPERF 468

Query: 507 NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVE 566
              + N  +    PVMIHRA+ GS ERFI I+ E+F GN P +++P Q  +  I      
Sbjct: 469 KLAFTNERNHAEQPVMIHRAILGSFERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHV 528

Query: 567 YAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS 626
           +A ++   LK   + +E   +N+++N K+R    +KIP+I++ G++E     + IR    
Sbjct: 529 FALKLKEALKKCDIFVEVLDKNDSLNKKVRLAEKQKIPMILVLGNEEVESEILSIRDREK 588

Query: 627 TTTQKVSLLDAIPIL 641
               K+ L + + ++
Sbjct: 589 QAQYKMPLKEFLNMV 603


>gi|187918575|ref|YP_001884138.1| threonyl-tRNA synthetase [Borrelia hermsii DAH]
 gi|238689297|sp|B2S162|SYT_BORHD RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|119861423|gb|AAX17218.1| threonyl-tRNA synthetase [Borrelia hermsii DAH]
          Length = 583

 Score =  509 bits (1310), Expect = e-142,   Method: Composition-based stats.
 Identities = 245/582 (42%), Positives = 359/582 (61%), Gaps = 17/582 (2%)

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           +    L   RHS AH+MAEAV  ++P  ++AIGP I+DGFYYDFD E+  + D+L  IE+
Sbjct: 6   DRESILYKKRHSIAHVMAEAVLELFPNTKIAIGPPIKDGFYYDFDFEKHITEDDLLLIEQ 65

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
           KM+EI+   SPF+K+ ++ E+A  LF+   E YK++++  +   + +++Y+   + DLC+
Sbjct: 66  KMREILKTGSPFVKEVITKEQALMLFK--DEPYKMDLIRGLAITDEISIYKSHNFTDLCK 123

Query: 185 GPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           GPHV + G++  K FKL  +AGAYWRGD    ML+RIYGT WN +++L  YL   EE ++
Sbjct: 124 GPHVDNMGKIDPKAFKLTSIAGAYWRGDEKNKMLTRIYGTLWNNEKDLKAYLKLREEIKR 183

Query: 244 RDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLD 301
           RDHRKL RE+DLF + ED G G+IF+H  G +I   +  + R +  K+ Y+ + TP +  
Sbjct: 184 RDHRKLGRELDLFSVHEDIGPGLIFFHPNGARIRAIIEDFWREEHFKNGYDVLFTPHIGK 243

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             LW+ SGH D Y+ +MF          D   + +KPMNCP H+A++N G  SYR+LP R
Sbjct: 244 SCLWETSGHLDFYKESMFEKMEM-----DKSNYYVKPMNCPFHIAIYNTGKHSYRDLPFR 298

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
            AE G+VYR E  G+LHG MRVRGFTQDDAH+ C  EQ+ +E  ++    + ++  FGF 
Sbjct: 299 WAELGTVYRYEKIGALHGTMRVRGFTQDDAHIICAYEQVKSEVQEVLRFALYMWNQFGFA 358

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            +   LST+PEK VG    W+ +  +++  L  +       I   +  G GAFYGPK + 
Sbjct: 359 DLKAYLSTKPEKAVGDKDDWEMSVKVLEEALIDLN------IAYDIDEGGGAFYGPKIDL 412

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            + D++GR+WQ  TIQ DFNLP RF   Y     ++  P MIHRA+ GSIERF GI++E+
Sbjct: 413 KIIDSLGREWQMSTIQFDFNLPERFKMTYTAEDGKEKRPFMIHRALLGSIERFFGILVEH 472

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIREHSI 600
           + G  P+WL+P+Q I+  + +   EYA EI +L K+  + I+ D   N  +N KIR++  
Sbjct: 473 YGGAFPVWLAPLQVIIIPVNNVVEEYALEILSLFKNEGIRIKLDNDCNMRMNAKIRQYQS 532

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           KK+P + I G+KE  E  I IR   +     + L +A+  + 
Sbjct: 533 KKVPYMFIIGEKEVVEGKISIRTRTNDQINGLELKEALEFVR 574


>gi|317176942|dbj|BAJ54731.1| threonyl-tRNA synthetase [Helicobacter pylori F16]
          Length = 612

 Score =  509 bits (1310), Expect = e-142,   Method: Composition-based stats.
 Identities = 235/615 (38%), Positives = 364/615 (59%), Gaps = 29/615 (4%)

Query: 39  VAVAINGKVCDLSDP----VREG-----SIEIITPED-PRSLAVIRHSCAHIMAEAVQSI 88
           +AV  + ++ DL       + +G       E I  +D P +L VIRHSCAH++A++++++
Sbjct: 6   IAVYKDEQIIDLESAKALGLSDGIKALNGTEPIYFDDSPLALEVIRHSCAHLLAQSLKAL 65

Query: 89  WPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE 148
           +P+ +  +GP++E+GFYYDF      S ++L +IE KM+E         K+ L+ E+A E
Sbjct: 66  YPDAKFFVGPVVEEGFYYDFKTASKISEEDLPKIEAKMKEFAKLKLAITKEVLTREQALE 125

Query: 149 LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYW 208
            F+   +  K  ++  I       +Y+QGE+ DLC+GPH+ +T  +  F KL K+AGAY 
Sbjct: 126 RFK--GDELKHAVMSKISGD-KFGVYQQGEFEDLCKGPHLPNTRFLNHF-KLTKLAGAYL 181

Query: 209 RGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIF 267
            GD N  ML RIYG A+ T++ L  YL+ +EE++KRDHRKL  E+ LF   ++ G+G+  
Sbjct: 182 GGDENNEMLIRIYGIAFATKEGLKDYLFQIEEAKKRDHRKLGVELGLFSFNDEIGAGLPL 241

Query: 268 WHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADD 326
           W  KG ++ + +   + + +    YE +  P++L   +W+ SGH+D+Y+ NM+       
Sbjct: 242 WLPKGARLRKRIEDLLSKALLLRGYEPVKGPEILKSDVWKISGHYDNYKENMYF------ 295

Query: 327 TIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
           T  D + + +KPMNC GH+ V+   L SYR+LP+R  E+G V+R+E SG LHGL+RVR F
Sbjct: 296 TTIDEQEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREF 355

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
           TQDDAH+FC+ EQ+ +E   I +    I + F F   M +LSTRP K +G D +W+ A N
Sbjct: 356 TQDDAHIFCSFEQIQSEVSAILDFTHKIMQAFDFSYEM-ELSTRPAKSIGDDKVWEKATN 414

Query: 447 IMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF 506
            +K  L       + RI+  +  G GAFYGPK +  + DA+ R WQCGTIQVD NLP RF
Sbjct: 415 ALKEALK------EHRIDYKIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDMNLPERF 468

Query: 507 NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVE 566
              + N  +    PVMIHRA+ GS ERFI I+ E+F GN P +++P Q  +  I      
Sbjct: 469 KLAFTNECNHAEQPVMIHRAILGSFERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHV 528

Query: 567 YAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS 626
           +A ++   LK   + +E   +N+++N K+R    +KIP+I++ G++E     + IR    
Sbjct: 529 FALKLKEELKKRDIFVEVLDKNDSLNKKVRSAEKQKIPMILVLGNEEMESEILSIRDREK 588

Query: 627 TTTQKVSLLDAIPIL 641
               K+ L + + ++
Sbjct: 589 QAQYKMPLKEFLNMV 603


>gi|261838989|gb|ACX98754.1| threonyl-tRNA synthetase [Helicobacter pylori 52]
          Length = 612

 Score =  508 bits (1309), Expect = e-142,   Method: Composition-based stats.
 Identities = 234/615 (38%), Positives = 364/615 (59%), Gaps = 29/615 (4%)

Query: 39  VAVAINGKVCDLSDP----VREG-----SIEIITPED-PRSLAVIRHSCAHIMAEAVQSI 88
           +AV  + ++ DL       + +G       E I  +D P +L VIRHSCAH++A++++++
Sbjct: 6   IAVYKDEQIIDLESAKALGLSDGVKALNGTEPIYFDDSPLALEVIRHSCAHLLAQSLKAL 65

Query: 89  WPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE 148
           +P+ +  +GP++E+GFYYDF      S ++L +IE KM+E         K+ L+ E+A E
Sbjct: 66  YPDAKFFVGPVVEEGFYYDFKTASKISEEDLPKIEAKMKEFAKLKLAITKEVLTREQALE 125

Query: 149 LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYW 208
            F+   +  K  ++  I       +Y+QGE+ DLC+GPH+ +T  +  F KL K+AGAY 
Sbjct: 126 RFK--GDELKHAVMSKISGDA-FGVYQQGEFEDLCKGPHLPNTRFLNHF-KLTKLAGAYL 181

Query: 209 RGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIF 267
            GD N  ML RIYG A+ T++ L  YL+ +EE++KRDHRKL  E+ LF   ++ G+G+  
Sbjct: 182 GGDENNEMLIRIYGIAFATKEGLKDYLFQIEEAKKRDHRKLGVELGLFSFDDEIGAGLPL 241

Query: 268 WHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADD 326
           W  KG ++ + +   + + +    YE +  P++L   +W+ SGH+D+Y+ NM+       
Sbjct: 242 WLPKGARLRKRIEDLLSKALLLRGYEPVKGPEILKSDVWKISGHYDNYKENMYF------ 295

Query: 327 TIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
           T  D + + +KPMNC GH+ V+   L SYR+LP+R  E+G V+R+E SG LHGL+RVR F
Sbjct: 296 TTIDEQEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREF 355

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
           TQDDAH+FC+ EQ+ +E   I +    I + F F   M +LSTRP K +G D +W+ A +
Sbjct: 356 TQDDAHIFCSFEQIQSEVSAILDFTHKIMQAFDFSYEM-ELSTRPAKSIGDDKVWEKATS 414

Query: 447 IMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF 506
            +K  L       + RI   +  G GAFYGPK +  + DA+ R WQCGTIQVD NLP RF
Sbjct: 415 ALKEALK------EHRIGYKIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDMNLPERF 468

Query: 507 NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVE 566
              + N  +    PVMIHRA+ GS ERFI I+ E+F GN P +++P Q  +  I      
Sbjct: 469 KLAFTNERNHAEQPVMIHRAILGSFERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHA 528

Query: 567 YAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS 626
           +A ++  +LK   + +E   +N+++N K+R    +KIP+I++ G++E     + IR    
Sbjct: 529 FALKLKEVLKKCDIFVEVLDKNDSLNKKVRLAEKQKIPMILVLGNEEVETEILSIRDREK 588

Query: 627 TTTQKVSLLDAIPIL 641
               K+ L + + ++
Sbjct: 589 QAQYKMPLKEFLNMV 603


>gi|308061413|gb|ADO03301.1| threonyl-tRNA synthetase [Helicobacter pylori Cuz20]
          Length = 612

 Score =  508 bits (1309), Expect = e-141,   Method: Composition-based stats.
 Identities = 236/615 (38%), Positives = 365/615 (59%), Gaps = 29/615 (4%)

Query: 39  VAVAINGKVCDLSDP----VREG-----SIEIITPED-PRSLAVIRHSCAHIMAEAVQSI 88
           +AV  + ++ DL       + +G       E I  +D P +L VIRHSCAH++A++++++
Sbjct: 6   IAVYKDEQIIDLESAKVLGLSDGVKALNGTEPIYFDDSPLALEVIRHSCAHLLAQSLKAL 65

Query: 89  WPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE 148
           +P+ +  +GP++E+GFYYDF      S ++L +IE KM+E         K+ L+ E+A E
Sbjct: 66  YPDAKFFVGPVVEEGFYYDFKTASKISEEDLPKIEAKMKEFAKLKLTITKEVLTREQALE 125

Query: 149 LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYW 208
            F+   +  K  ++  I       +Y+QGE+ DLC+GPH+ +T  +  F KL K+AGAY 
Sbjct: 126 RFK--GDELKHAVMSKISGD-VFGVYQQGEFEDLCKGPHLPNTRFLNHF-KLTKLAGAYL 181

Query: 209 RGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIF 267
            GD N  ML RIYG A+ T++ L  YL+ +EE++KRDHRKL  E+ LF   ++ G+G+  
Sbjct: 182 GGDENNEMLIRIYGIAFATKEGLKDYLFQMEEAKKRDHRKLGVELGLFSFDDEIGAGLPL 241

Query: 268 WHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADD 326
           W  KG ++ + +   + + +    YE +  P++L   +W+ SGH+D+Y+ NM+       
Sbjct: 242 WLPKGARLRKRIEDLLSKALLLRGYEPVKGPEILKSDVWKISGHYDNYKENMYF------ 295

Query: 327 TIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
           T  D + + +KPMNC GH+ V+   L SYR+LP+R  E+G V+R+E SG LHGL+RVR F
Sbjct: 296 TTIDEQEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREF 355

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
           TQDDAH+FC+ EQ+ +E   I +    I + F F   M +LSTRP K +G D +W+ A N
Sbjct: 356 TQDDAHIFCSFEQIQSEVSAILDFTHKIMQAFDFSYEM-ELSTRPAKSIGDDKVWEKATN 414

Query: 447 IMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF 506
            +K  L       + RI+  +  G GAFYGPK +  + DA+ R WQCGTIQVD NLP RF
Sbjct: 415 ALKEALK------EHRIDYKIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDMNLPERF 468

Query: 507 NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVE 566
              + N H+    PVMIHRA+ GS ERFI I+ E+F GN P +++P Q  +  I      
Sbjct: 469 KLAFTNEHNHAEQPVMIHRAILGSFERFIAILSEHFGGNFPFFVAPTQIALIPINEEHRA 528

Query: 567 YAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS 626
           +A ++   LK   + +E   +N+++N K+R    +KIP+I++ G++E     + IR    
Sbjct: 529 FALKLKEELKKRDIFVEVLDKNDSLNKKVRLAEKQKIPMILVLGNEEVGTEILSIRDREK 588

Query: 627 TTTQKVSLLDAIPIL 641
               K+ L + + ++
Sbjct: 589 QAQYKMPLKEFLNMV 603


>gi|297379344|gb|ADI34231.1| threonyl-tRNA synthetase [Helicobacter pylori v225d]
          Length = 612

 Score =  508 bits (1308), Expect = e-141,   Method: Composition-based stats.
 Identities = 234/600 (39%), Positives = 361/600 (60%), Gaps = 21/600 (3%)

Query: 46  KVCDLSDPVR--EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG 103
           KV  LSD ++   G+  I   + P +L VIRHSCAH++A+++++++P+ +  +GP++E+G
Sbjct: 21  KVLGLSDGIKALNGTEPIYFDDSPLALEVIRHSCAHLLAQSLKALYPDAKFFVGPVVEEG 80

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE 163
           FYYDF      S ++L +IE KM+E         K+ L+ E+A E F+   +  K  ++ 
Sbjct: 81  FYYDFKTASKISEEDLPKIEAKMKEFAKLKLAITKEVLTREQALERFK--GDELKHAVMS 138

Query: 164 SIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
            I       +Y+QGE+ DLC+GPH+ +T  +  F KL K+AGAY  GD N  ML RIYG 
Sbjct: 139 KISGD-KFGVYQQGEFEDLCKGPHLPNTRFLNHF-KLTKLAGAYLGGDENNEMLIRIYGI 196

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISY 282
           A+ T++ L  YL+ +EE++KRDHRKL  E+ LF   ++ G+G+  W  KG ++ + +   
Sbjct: 197 AFATKEGLKDYLFQIEEAKKRDHRKLGVELGLFSFDDEIGAGLPLWLPKGARLRKRIEDL 256

Query: 283 MRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           + + +    YE +  P++L   +W+ SGH+D+Y+ NM+       T  D + + +KPMNC
Sbjct: 257 LSKALLLRGYEPVKGPEILKSDVWKISGHYDNYKENMYF------TTIDEQEYGIKPMNC 310

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
            GH+ V+   L SYR+LP+R  E+G V+R+E SG LHGL+RVR FTQDDAH+FC+ EQ+ 
Sbjct: 311 VGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDAHIFCSFEQIQ 370

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
           +E   I +    I + F F   M +LSTRP K +G D +W+ A N +K  L       + 
Sbjct: 371 SEVSAILDFTHKIMQAFDFSYEM-ELSTRPAKSIGDDKVWEKATNALKEALK------EH 423

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
           RI+  +  G GAFYGPK +  + DA+ R WQCGTIQVD NLP RF   + N ++    PV
Sbjct: 424 RIDYKIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDMNLPERFKLAFTNEYNHAEQPV 483

Query: 522 MIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLS 581
           MIHRA+ GS ERFI I+ E+F GN P +++P Q  +  I      +A ++   LK   + 
Sbjct: 484 MIHRAILGSFERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHVFALKLKEALKKRDIF 543

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           +E   +N+++N K+R    +KIP+I++ G++E     + IR        K+ L + + ++
Sbjct: 544 VEVLDKNDSLNKKVRSAEKQKIPMILVLGNEEVGTEILSIRDREKQAQYKMPLKEFLNMV 603


>gi|226321417|ref|ZP_03796944.1| threonyl-tRNA synthetase [Borrelia burgdorferi Bol26]
 gi|226233213|gb|EEH31965.1| threonyl-tRNA synthetase [Borrelia burgdorferi Bol26]
          Length = 581

 Score =  508 bits (1308), Expect = e-141,   Method: Composition-based stats.
 Identities = 245/582 (42%), Positives = 360/582 (61%), Gaps = 16/582 (2%)

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
             +    L   RHS AH+MAEAV  ++P  ++AIGP I+DGFYYDF+ ++  + D L  I
Sbjct: 4   DLDKEDILYKKRHSIAHVMAEAVLDLFPNTKIAIGPPIKDGFYYDFEFKKQITEDSLLDI 63

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M+EI+   S F K+ +S E+A E+F+   E YK++++++   +  V++Y+   + DL
Sbjct: 64  ENRMREILKTGSSFEKEIISVEQALEIFK--DEPYKIDLIKNFDLQNEVSIYKSHNFVDL 121

Query: 183 CRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           CRGPHV +  ++  K FKL  +AGAYWRG    PML+RIYGT WN ++EL  YL   EE 
Sbjct: 122 CRGPHVENMNKIDPKAFKLTSIAGAYWRGSEKNPMLTRIYGTLWNNEKELRSYLNLREEI 181

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQV 299
           +KRDHRKL +E+DLF I E+ G G++F+H  G KI   +  + R +  K+ Y+ + TP +
Sbjct: 182 KKRDHRKLGKELDLFSIHEEIGPGLVFFHPNGAKIRALIEDFWREEHSKNGYDILFTPHI 241

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               LWQ SGH D Y+ +MF     +    D   + LKPMNCP H+A++N G  SYR+LP
Sbjct: 242 GKSWLWQTSGHLDFYKDSMF-----EKIEMDKSDYYLKPMNCPFHIAIYNTGKHSYRDLP 296

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
            R AE G+VYR E  G+LHG+MR RGFTQDDAH+ CT  Q+ +E  ++    I ++  FG
Sbjct: 297 FRWAELGTVYRYEKIGALHGMMRARGFTQDDAHIICTHSQVLDEIKEVLRFAIYMWSKFG 356

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F      LST+P+K VG+D+ W+ +  ++K  L   +      +   +  G GAFYGPK 
Sbjct: 357 FSNPKAYLSTKPDKSVGNDSDWEMSLKVLKETLSDFE------VPYEIDKGGGAFYGPKI 410

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +  + D++ R+WQ  TIQ DFNLP RFN  Y     ++  P MIHRA+ GSIERF GI++
Sbjct: 411 DLKIVDSLEREWQMSTIQFDFNLPERFNMTYTAEDGKEKRPFMIHRALLGSIERFFGILV 470

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E++ G  PLWLSP+Q ++  + +   +YA ++ N  K+  + I+ D  +  +N KIRE+ 
Sbjct: 471 EHYGGAFPLWLSPVQVVIIPVNNIVEDYAIKVFNKFKNEGIRIKLDNSSSRMNAKIREYQ 530

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            KKIP + I G++EA+E  I IR   +     + L +A+  +
Sbjct: 531 AKKIPYMFIIGEREATEERISIRTRTNEQINGMKLDEALKFI 572


>gi|225374732|ref|ZP_03751953.1| hypothetical protein ROSEINA2194_00352 [Roseburia inulinivorans DSM
           16841]
 gi|225213424|gb|EEG95778.1| hypothetical protein ROSEINA2194_00352 [Roseburia inulinivorans DSM
           16841]
          Length = 594

 Score =  508 bits (1308), Expect = e-141,   Method: Composition-based stats.
 Identities = 213/595 (35%), Positives = 356/595 (59%), Gaps = 25/595 (4%)

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDE 118
           +++  +    L  + HSCAH+MA+AV+ ++P+ +  +GP++++GFYYD D  +   + + 
Sbjct: 3   KMVDFKADERLNTLNHSCAHVMAQAVKHLYPQAKFWVGPVVKEGFYYDIDLGDDIINDEA 62

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           +A IEK+M+++        ++ +S  +A E+F+   + YK++++E +    N+++Y QG+
Sbjct: 63  IAAIEKEMKKVCKEGKKIYRREISKAEAMEMFK--DDPYKLDLIEGL-EDGNISVYDQGD 119

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + DLCRGPHV +T   K F KL+K +G YW+GD+N  ++ RIYG  + T +EL ++L  L
Sbjct: 120 FTDLCRGPHVDNTKLCKNF-KLVKYSGVYWKGDANNHVMQRIYGVCFPTPEELEEHLKLL 178

Query: 239 EESEKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINT 296
           EE++ RDHRK+ +EM+LF   +  G G+  +  KG+ ++Q L +Y++ ++ K  Y  + T
Sbjct: 179 EEAKDRDHRKIGKEMNLFMSDDLVGRGLPMFLPKGYTVWQELENYIKAKERKLGYLHVMT 238

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P V   +L++ SGHWD Y+ NMF          +  +F L+PMNCP H+ ++ + + SY+
Sbjct: 239 PCVGTVNLYKTSGHWDHYKDNMFPAMEV-----EGESFVLRPMNCPHHMMIYANRMHSYK 293

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +LP+R+ E    +R E SG+L G+ R R F Q+DAH+F T EQ+ +E  ++ +LI   YK
Sbjct: 294 DLPIRIGEIAHDFRFEASGTLKGIERGRHFCQNDAHLFVTPEQIESEFSQVVDLIFDTYK 353

Query: 417 DFGFEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
           DF        LS R      K    D +W+ AEN ++ VLD +       I+    +GE 
Sbjct: 354 DFNITDYRCVLSLRDPADKVKYHDDDEMWNTAENALRKVLDDLG------IDYTEEIGEA 407

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           AFYGPK +  +K AIG ++   T Q+DF LP +FN  Y++    K  PV++HRA+ GS++
Sbjct: 408 AFYGPKLDVNVKPAIGNEYTLSTCQLDFCLPEKFNLTYIDKDGTKKTPVVLHRAILGSLD 467

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVE---YAQEIANLLKSHHLSIETDFRNE 589
           RF+  ++E  KGNLPLWL+P+QA +  + +   E   Y+ E+ + L  + + +E D R E
Sbjct: 468 RFMAYILEETKGNLPLWLAPVQARIIPVKNEDEELNAYSHELLSYLDENGIRVEIDERAE 527

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            + Y++R   ++K+P +II G  E  + ++  R  G   T  V   + + +L  E
Sbjct: 528 KLGYRVRAAQVEKVPYLIILGKNEVKDGTVSYRLHGEQATTTVPKEEFLAMLKDE 582


>gi|153803259|ref|ZP_01957845.1| threonyl-tRNA synthetase [Vibrio cholerae MZO-3]
 gi|124121199|gb|EAY39942.1| threonyl-tRNA synthetase [Vibrio cholerae MZO-3]
          Length = 516

 Score =  508 bits (1308), Expect = e-141,   Method: Composition-based stats.
 Identities = 244/514 (47%), Positives = 338/514 (65%), Gaps = 19/514 (3%)

Query: 137 LKQYLSHEKARE----LFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCRGPHVRST 191
            K  +S E         FES+ E+YK+EIL E++   +   LY   E+ D+CRGPHV   
Sbjct: 6   TKYAVSKESELAGSARYFESRGESYKMEILDENVARDDRPGLYHHEEYIDMCRGPHVPHM 65

Query: 192 GQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAR 251
           G  + F KL+ +AGAYWRG+S+  ML RIYGTA++ ++ L  +L  LEE+ KRDHRK+ +
Sbjct: 66  GFCQNF-KLLNIAGAYWRGNSDNKMLQRIYGTAFHDKKALQAHLTRLEEAAKRDHRKIGK 124

Query: 252 EMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGH 310
           ++DLFH+ ++  G++FWH  GW +F+ L  ++R K+ +  Y+E+  P ++D+ LW++SGH
Sbjct: 125 QLDLFHMQQEAPGMVFWHHNGWSVFRDLEIFIRHKLNEYGYQEVKGPLMMDRVLWERSGH 184

Query: 311 WDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYR 370
           WD Y   MF       T  + R +A+KPMNCPGH+ +FN GLKSYR+LP+R+AEFGS +R
Sbjct: 185 WDKYADAMFT------TSSENREYAIKPMNCPGHIQIFNQGLKSYRDLPLRMAEFGSCHR 238

Query: 371 NEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR 430
           NEPSGSLHG+MRVRGFTQDDAH+FCT++Q+  E      ++   Y  FGF+ I+VKLSTR
Sbjct: 239 NEPSGSLHGIMRVRGFTQDDAHIFCTEDQIQQEVTSCIKMVYDTYTTFGFQNIVVKLSTR 298

Query: 431 PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRD 490
           PEKRVGSD +WD +E  +   L  +       I   +  GEGAFYGPK E+ L D + R 
Sbjct: 299 PEKRVGSDEIWDKSEQALIDSLKAM------DIPFEIQEGEGAFYGPKIEFTLYDCLDRA 352

Query: 491 WQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL 550
           WQCGT+Q+DFNLP+R  A YV   +E+  PVMIHRA+ GS+ERFIGI+IE + G  P WL
Sbjct: 353 WQCGTVQLDFNLPTRLGATYVGESNERLIPVMIHRAILGSLERFIGILIEEYAGFFPTWL 412

Query: 551 SPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           +P QA+V  IT    +YA E+A  L+   +  + D RNE I +KIREH++K++P +++CG
Sbjct: 413 APEQAVVVNITDKQADYAHEVAQKLQKCGIRAKADLRNEKIGFKIREHTLKRVPYMLVCG 472

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           D+E     I +R        K  L D I  +  E
Sbjct: 473 DQEMEAGEIAVRTRKGKDLGKFKLDDFIAHIQAE 506


>gi|303390083|ref|XP_003073273.1| threonyl-tRNA synthetase [Encephalitozoon intestinalis ATCC 50506]
 gi|303302418|gb|ADM11913.1| threonyl-tRNA synthetase [Encephalitozoon intestinalis ATCC 50506]
          Length = 646

 Score =  508 bits (1307), Expect = e-141,   Method: Composition-based stats.
 Identities = 228/644 (35%), Positives = 361/644 (56%), Gaps = 31/644 (4%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            +K+ F +  +       T  D+     +   K  ++  ING   D+   +  +  +E +
Sbjct: 5   KLKVKFEN-RVLEVSQGMTPYDILSEYCKD-RKDVISCKINGIYSDMVVEIPGDCELEFL 62

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T ED  +  +  HS AHI+  A+ +++P+ ++  GP  E+GF+YD D +   SS++  +I
Sbjct: 63  TFEDNGAREIFWHSSAHILGNALVNLYPDAKLVHGPPTEEGFFYDVDIKDSISSEDYQKI 122

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M +I+ ++  F K   S E+   L   K    K   ++    KE+ ++YR G++FD+
Sbjct: 123 EMEMLKIMKKNYRFEKVIKSKEEL--LNAYKDNPCKTHFIKKGVDKES-SVYRNGDFFDM 179

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C GPHV STG VK   K++K + AY+  D +   L RIY   + +++ L +YL   EE+ 
Sbjct: 180 CLGPHVLSTGVVK-AVKVLKNSSAYFLNDPSLKSLQRIYAITFPSKEMLQEYLKRKEEAM 238

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD 301
           +RDHRK+  E+DLF  ++   G  F+   G  ++ TLI ++R + +   ++E+ TP +  
Sbjct: 239 ERDHRKIGTELDLFFFSKYSPGSCFFLPNGAIMYNTLIEFLREEYRKRGFKEVITPNIFC 298

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             LW++SGH  +Y+ NMF +        +   FALKPMNCPGH  +F H   S+R+LP+R
Sbjct: 299 TKLWEESGHLQNYKENMFLI--------EGDNFALKPMNCPGHCVMFKHQDHSFRDLPLR 350

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           LA+FG ++RNE SG+L GL RVR F QDDAH+FCT++Q+  E       +  +Y  FGF+
Sbjct: 351 LADFGVLHRNELSGTLTGLTRVRRFQQDDAHIFCTRDQVKGEIKGCLEFLSFVYGVFGFK 410

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
             +V LSTRPEK +GS   W++AE ++   +D    S +      +  G+GAFYGPK + 
Sbjct: 411 FELV-LSTRPEKYLGSIDEWNNAEKVLAEAMDESGMSFK------INEGDGAFYGPKIDI 463

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L DA+GR  QC TIQ+DF LP RF   Y +S  +   PV+IHRA+ GSIER I I++E+
Sbjct: 464 TLHDALGRKIQCATIQLDFQLPQRFELKYRDSDGQCKTPVIIHRAILGSIERMIAIILES 523

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           F   LP W+SP Q  +  + +  ++Y ++I ++L      ++      T+N +IR     
Sbjct: 524 FGKKLPFWISPRQIAIINMGN--LDYVEKIKSVLSK--FRLDVIDDGNTMNKRIRTAETC 579

Query: 602 KIPIIIICGDKEASERSIGIRR----FGSTTTQKVSLLDAIPIL 641
              ++ + G+KEA    I IR      G  + + + L +   IL
Sbjct: 580 GYSLVCVVGEKEAKTDEINIRLSKSGKGGKSNENIGLYELRDIL 623


>gi|313112983|ref|ZP_07798626.1| threonyl-tRNA synthetase [Faecalibacterium cf. prausnitzii KLE1255]
 gi|310624703|gb|EFQ08015.1| threonyl-tRNA synthetase [Faecalibacterium cf. prausnitzii KLE1255]
          Length = 594

 Score =  507 bits (1306), Expect = e-141,   Method: Composition-based stats.
 Identities = 211/583 (36%), Positives = 335/583 (57%), Gaps = 21/583 (3%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQIEKKMQE 128
           L VIRH+ AHIMA+A++ ++P+   A GP  E+GFYYD D  +Q  S ++LA IEK+M++
Sbjct: 19  LHVIRHTAAHIMAQAIKRLYPQADFAFGPATENGFYYDVDLGDQKLSDEDLANIEKEMRK 78

Query: 129 IIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           I+  + P     L   +A +L E +KE YK+E +  +  +   + ++QGE+ D+C GPH+
Sbjct: 79  IVKENLPIKPFILPRAEAVKLMEERKENYKIEHMADLADETEFSFFQQGEYVDMCIGPHL 138

Query: 189 RSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRK 248
             T  +K F K+ + +GAYW+ D    ML+RI G A+  Q+EL  +    +E+ +RDHRK
Sbjct: 139 TYTKALKAF-KITQQSGAYWKNDKENKMLTRINGVAFRNQEELDAWEKEQQEARERDHRK 197

Query: 249 LAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQ 306
           + +EM LF   +  G G+  +   G+ ++Q L +Y++ K +   Y  + TP +   +L++
Sbjct: 198 IGKEMGLFMTDDLVGRGLPMFLPAGYTVWQELENYIKEKERARGYLHVMTPCIGTVNLYK 257

Query: 307 QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFG 366
            SGHWD YR NMF          +  ++ L+PMNCP H+ ++ +   SYR+LP+R+ E  
Sbjct: 258 TSGHWDHYRENMFPAMEM-----EGESYVLRPMNCPHHMMIYANRPHSYRDLPMRIGEIA 312

Query: 367 SVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK 426
             +R E SG+L G+ R R F Q+DAH+FCT EQ+ +E   + +LI  +YKDF        
Sbjct: 313 HDFRYESSGTLKGIERGRHFCQNDAHLFCTPEQIKSEVANVCDLIFEVYKDFNITDYRCV 372

Query: 427 LSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           LS R      K    DA+W+ AE  ++ VL  +       I+    +GE AFYGPK +  
Sbjct: 373 LSLRDPADKKKYHDDDAMWNHAEQALREVLTELG------IHFTEEIGEAAFYGPKLDVN 426

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +K A+G ++   T Q+DF LP++F+  YV+    +  PV++HRA+ GS++RF+  +IE  
Sbjct: 427 VKPAVGAEYTLSTCQLDFCLPAKFHLTYVDKDGTEKTPVVLHRAILGSLDRFMAYLIEET 486

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH-SIK 601
           KG  P WL+P Q  V  ++   ++YA+ +   L    + +  D  N+ I YKIRE   + 
Sbjct: 487 KGKFPTWLAPTQVKVLPVSEKTLDYAEGVTEKLVEAGVRVVLDDDNQKIGYKIREAQQVD 546

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           ++P +++ G KEA   +I +R      T  + L   I  +T E
Sbjct: 547 RVPYMLVLGAKEAEAGNISVRDRKG-ETTTMELDAFIAKVTAE 588


>gi|308183917|ref|YP_003928050.1| threonyl-tRNA synthetase [Helicobacter pylori SJM180]
 gi|308059837|gb|ADO01733.1| threonyl-tRNA synthetase [Helicobacter pylori SJM180]
          Length = 612

 Score =  507 bits (1306), Expect = e-141,   Method: Composition-based stats.
 Identities = 236/600 (39%), Positives = 362/600 (60%), Gaps = 21/600 (3%)

Query: 46  KVCDLSDPVR--EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG 103
           KV  LSD ++  +GS  I   + P +L VIRHSCAH++A+++++++P+ +  +GP++E+ 
Sbjct: 21  KVLGLSDGIKALKGSEPIFFDDSPLALEVIRHSCAHLLAQSLKALYPDAKFFVGPVVEER 80

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE 163
           FYYDF      S ++L +IE KM+E         K+ L+ E+A E F+   +  K  ++ 
Sbjct: 81  FYYDFKTSSKISEEDLPKIEAKMKEFAKLKLAITKETLTREQALERFK--GDELKHAVMS 138

Query: 164 SIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
            I       +Y+QGE+ DLC+GPH+ +T  +  F KL K+AGAY  GD N  ML RIYG 
Sbjct: 139 KISGD-IFGVYQQGEFEDLCKGPHLPNTRFLNHF-KLTKLAGAYLGGDENNEMLIRIYGI 196

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISY 282
           A+ T++ L  YL+ +EE++KRDHRKL  E+ LF   ++ G+G+  W  KG ++ + +   
Sbjct: 197 AFATKEGLKDYLFQIEEAKKRDHRKLGVELGLFSFDDEIGAGLPLWLPKGARLRKRIEDL 256

Query: 283 MRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           + + +    YE +  P++L   +W+ SGH+D+Y+ NM+       T  D + + +KPMNC
Sbjct: 257 LSKALLLRGYEPVKGPEILKSDVWKISGHYDNYKENMYF------TTIDEQEYGIKPMNC 310

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
            GH+ V+   L SYR+LP+R  E+G V+R+E SG LHGL+RVR FTQDDAH+FC+ EQ+ 
Sbjct: 311 VGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDAHIFCSFEQIQ 370

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
           +E   I +    I + F F   M +LSTRP K +G D +W+ A N +K  L       + 
Sbjct: 371 SEVSAILDFTHKIMQAFDFSYEM-ELSTRPAKSIGDDKVWEKATNALKEALK------EH 423

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
           RI+  +  G GAFYGPK +  + DA+ R WQCGTIQVD NLP RF   + N H+    PV
Sbjct: 424 RIDYKIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDMNLPERFKLAFTNEHNHAEQPV 483

Query: 522 MIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLS 581
           MIHRA+ GS ERFI I+ E+F GN P +++P Q  +  I      +A ++   LK   + 
Sbjct: 484 MIHRAILGSFERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHVFALKLKEELKKRDIF 543

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           +E   +N+++N K+R    +KIP+I++ G++E     + IR     T  K+ L + + ++
Sbjct: 544 VEVLDKNDSLNKKVRLAEKQKIPMILVLGNEEMETEILSIRDREKQTQYKMPLKEFLNMV 603


>gi|224534482|ref|ZP_03675058.1| threonine--tRNA ligase [Borrelia spielmanii A14S]
 gi|224514159|gb|EEF84477.1| threonine--tRNA ligase [Borrelia spielmanii A14S]
          Length = 581

 Score =  507 bits (1305), Expect = e-141,   Method: Composition-based stats.
 Identities = 246/582 (42%), Positives = 364/582 (62%), Gaps = 16/582 (2%)

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
             +    L   RHS AH+MAEAV  ++P  ++AIGP I+DGFYYDF+ ++  + D L  I
Sbjct: 4   DLDKEDILYKKRHSIAHVMAEAVCDLFPNTKIAIGPPIKDGFYYDFEFKKQITEDALLDI 63

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M+EI+   S F K+ +S E+A E+F+   E YK++++++   +  +++Y+   + DL
Sbjct: 64  EKRMREILKTGSSFEKELISVEQALEIFK--DEPYKIDLIKNFDLQNEISIYKSHNFVDL 121

Query: 183 CRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           CRGPHV +  ++  K FKL  +AGAYWRG+    ML+RIYGT WN ++EL  YL   EE 
Sbjct: 122 CRGPHVDNMNKIDPKAFKLTSIAGAYWRGNEKNTMLTRIYGTLWNNEKELRSYLNLREEI 181

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQV 299
           +KRDHRKL +E+DLF I E+ G G++F+H  G KI   +  + R +  K+ Y+ + +P +
Sbjct: 182 KKRDHRKLGKELDLFSIHEEIGPGLVFFHPNGAKIRALIEDFWREEHSKNGYDILFSPHI 241

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               LWQ SGH D Y+ +MF     +    D   + LKPMNCP H+A++N G  SYR+LP
Sbjct: 242 GKSWLWQTSGHLDFYKDSMF-----EKIEMDKSDYYLKPMNCPFHIAIYNTGKHSYRDLP 296

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
            R AE G+VYR E  G+LHG+MR RGFTQDDAH+ CT  Q+ +E  ++    I ++  FG
Sbjct: 297 FRWAELGTVYRYEKIGALHGMMRARGFTQDDAHIICTHSQVVDEIKEVLRFAIYMWSKFG 356

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F  +   LST+PEK VG+D+ W+ +  +++  L      S  ++   +  G GAFYGPK 
Sbjct: 357 FNSLKAYLSTKPEKFVGNDSDWEMSLKVLEEAL------SGFKVPYEIDKGGGAFYGPKI 410

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +  + D++ R+WQ  T+Q DFNLP RFN  Y     ++  P MIHRA+ GSIERF GI+I
Sbjct: 411 DLKIVDSLEREWQMSTVQFDFNLPERFNMTYTAEDGKEKRPFMIHRALLGSIERFFGILI 470

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E++ G  PLWLSPIQA++  + ++  +YA ++ N  K+  + I+ D  +  +N KIRE+ 
Sbjct: 471 EHYGGAFPLWLSPIQAVIIPVNNAVEDYAIKVLNKFKNEGIRIKLDNTSSRMNAKIREYQ 530

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            KKIP + I G++EA+E  I IR   +     + L +A   +
Sbjct: 531 AKKIPYMFIIGEREATEEKISIRTRTNEQINGIKLDEAFEFI 572


>gi|225548931|ref|ZP_03769908.1| threonyl-tRNA synthetase [Borrelia burgdorferi 94a]
 gi|225370534|gb|EEG99970.1| threonyl-tRNA synthetase [Borrelia burgdorferi 94a]
          Length = 581

 Score =  507 bits (1304), Expect = e-141,   Method: Composition-based stats.
 Identities = 244/582 (41%), Positives = 359/582 (61%), Gaps = 16/582 (2%)

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
             +    L   RHS AH+MAEAV  ++P  ++AIGP I+DGFYYDF+ ++  + D L  I
Sbjct: 4   DLDKEDILYKKRHSIAHVMAEAVLDLFPNTKIAIGPPIKDGFYYDFEFKKQITEDSLLDI 63

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M+EI+   S F K+ +S E+A E+F+   E YK++++++   +  V++Y+   + DL
Sbjct: 64  ENRMREILKTGSSFEKEIISVEQALEIFK--DEPYKIDLIKNFDLQNEVSIYKSHNFVDL 121

Query: 183 CRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           CRGPHV +  ++  K FKL  +AGAYWRG    PML+RIYGT WN ++EL  YL   EE 
Sbjct: 122 CRGPHVENMNKIDPKAFKLTSIAGAYWRGSEKNPMLTRIYGTLWNNEKELRSYLNLREEI 181

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQV 299
           +KRDHRKL +E+DLF I E+ G G++F+H  G KI   +  + R +  K+ Y+ + TP +
Sbjct: 182 KKRDHRKLGKELDLFSIHEEIGPGLVFFHPNGAKIRALIEDFWREEHSKNGYDILFTPHI 241

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               LWQ SGH D Y+ +MF     +    D   + LKPMNCP H+A++N G  SYR+LP
Sbjct: 242 GKSWLWQTSGHLDFYKDSMF-----EKIEMDKSDYYLKPMNCPFHIAIYNTGKHSYRDLP 296

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
            R AE G+VYR E  G+LHG+MR RGFTQDDAH+ CT  Q+ +E  ++    I ++  FG
Sbjct: 297 FRWAELGTVYRYEKIGALHGMMRARGFTQDDAHIICTHSQVLDEIKEVLRFAIYMWSKFG 356

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F      LST+P+K VG+D  W+ +  +++  L   +      +   +  G GAFYGPK 
Sbjct: 357 FSNPKAYLSTKPDKSVGNDYDWEMSLKVLEETLSDFE------VPYEIDKGGGAFYGPKI 410

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +  + D++ R+WQ  TIQ DFNLP RFN  Y     ++  P MIHRA+ GSIERF GI++
Sbjct: 411 DLKIVDSLEREWQMSTIQFDFNLPERFNMTYTAEDGKEKRPFMIHRALLGSIERFFGILV 470

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E++ G  PLWLSP+Q ++  + +   +YA ++ N  K+  + I+ D  +  +N KIRE+ 
Sbjct: 471 EHYGGAFPLWLSPVQVVIIPVNNIVEDYAIKVFNKFKNEGIRIKLDNSSSRMNAKIREYQ 530

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            KKIP + I G++EA+E  I IR   +     + L +A+  +
Sbjct: 531 AKKIPYMFIIGEREATEERISIRTRTNEQINGMKLDEALKFI 572


>gi|320102238|ref|YP_004177829.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Isosphaera
           pallida ATCC 43644]
 gi|319749520|gb|ADV61280.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Isosphaera
           pallida ATCC 43644]
          Length = 752

 Score =  507 bits (1304), Expect = e-141,   Method: Composition-based stats.
 Identities = 235/729 (32%), Positives = 369/729 (50%), Gaps = 95/729 (13%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDP---VREGS-- 58
            I++  PDGS++  P   T  D+A  I + LA+ AVA   +G + DL  P   +RE +  
Sbjct: 1   MIQVKLPDGSVREAPEGTTARDIAAGIGKRLAEAAVAAVADGHIIDLDRPLDAIRESTLT 60

Query: 59  ---------------IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG 103
                          + I+TP+D  +L V+RHS AH+MA A+  ++PEV++A GP    G
Sbjct: 61  SSNGTVAPKTDQPIDLRILTPKDREALDVLRHSTAHVMARAIMRLFPEVRLAFGPTTAQG 120

Query: 104 FYYDFDKE-QPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL 162
           FYYD     +  S ++   IE +M  I+    PF +  L   +A E  E  K+ +K+E +
Sbjct: 121 FYYDVHIPGRSLSEEDFPAIEAEMSRIVQAGEPFERFTLPVAQAIEFLEGIKQDFKIEHI 180

Query: 163 -ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIY 221
            + +     ++ YRQGE+ DLCRGPH+   G+V  F KL  +AGAYW+G ++ PML R+Y
Sbjct: 181 TQELHTHGVLSFYRQGEFVDLCRGPHIPHAGKVGAF-KLTSIAGAYWKGRADGPMLQRVY 239

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLI 280
           GTA+  +Q+L  +L  +EE++KRDHR++ +++ LF I+   GSG++ W  KG  +   L 
Sbjct: 240 GTAFFNRQDLDTHLARIEEAKKRDHRRIGKDLHLFTISPLAGSGLVLWMPKGAMVRTILQ 299

Query: 281 SYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA------------VKCADDT 327
            +++ + +K  Y+ + TP +    L++ SGH+  Y  + F             V+  +  
Sbjct: 300 QFLQDELLKRGYQPVYTPHIGRVELYKTSGHYPYYSDSQFPTLKLLSDPAKRLVEAIESG 359

Query: 328 IKDLRTFALKPMNCPGHVAVF------NHGLKSYREL---------------------PV 360
                  A + ++  G   V       + G +S+ E+                     P+
Sbjct: 360 EAMDDATACRLLSEAGIPPVSVTPGSGSGGARSFTEMSPGERAAYVREHGVAEEYLLKPM 419

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGF---------------------TQDDAHVFCTKEQ 399
                  +Y+ +        +R+  F                     TQDDAH+FCT EQ
Sbjct: 420 NCPHHIEIYKAQQRSYRDLPVRLAEFGTVYRYEQSGELSGLTRVRGFTQDDAHLFCTPEQ 479

Query: 400 MFNECLKIHNLIISIYKDFGFEKIMVKLS---TRPEKRVGSDA-LWDDAENIMKGVLDTI 455
           + +E  +   L   + +  G     V+LS       K  G+DA +W  AE  ++ VL+ +
Sbjct: 480 VRSEFAETMRLTQFVLESLGLSDYRVRLSRSDPDDPKFQGADASIWLKAEADIRAVLEDL 539

Query: 456 KNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS 515
                + I      GE AFYGPK +++++D +GR WQ GT+Q+D+ LP RF   Y+   +
Sbjct: 540 GLPYDEGI------GEAAFYGPKADFLVRDCLGRQWQLGTVQLDYVLPERFGLEYIGPDN 593

Query: 516 EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLL 575
               PVMIHRA FGS+ERF+GI+IE+F G  PLWL+P Q  V  I+    EY + + + L
Sbjct: 594 APHRPVMIHRAPFGSMERFMGILIEHFAGAFPLWLAPEQVRVLPISDKFNEYGRTVLHTL 653

Query: 576 KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
           +   L  E D R E I  KIR+  ++KIP++++ G KEA   ++  R         VSL 
Sbjct: 654 RQAGLRAELDQRPEKIGAKIRDAQLEKIPVMLVVGAKEAETGTVSYRDRVDGDRGVVSLA 713

Query: 636 DAIPILTKE 644
           DA+  L +E
Sbjct: 714 DAVASLRRE 722


>gi|15595065|ref|NP_212854.1| threonyl-tRNA synthetase [Borrelia burgdorferi B31]
 gi|218249246|ref|YP_002375218.1| threonyl-tRNA synthetase [Borrelia burgdorferi ZS7]
 gi|223889476|ref|ZP_03624062.1| threonyl-tRNA synthetase [Borrelia burgdorferi 64b]
 gi|8928363|sp|O51662|SYT_BORBU RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|226701542|sp|B7J0G5|SYT_BORBZ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|2688663|gb|AAC67076.1| threonyl-tRNA synthetase (thrZ) [Borrelia burgdorferi B31]
 gi|218164434|gb|ACK74495.1| threonyl-tRNA synthetase [Borrelia burgdorferi ZS7]
 gi|223885162|gb|EEF56266.1| threonyl-tRNA synthetase [Borrelia burgdorferi 64b]
 gi|312147875|gb|ADQ30534.1| threonyl-tRNA synthetase [Borrelia burgdorferi JD1]
          Length = 581

 Score =  507 bits (1304), Expect = e-141,   Method: Composition-based stats.
 Identities = 244/582 (41%), Positives = 360/582 (61%), Gaps = 16/582 (2%)

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
             +    L   RHS AH+MAEAV  ++P  ++AIGP I+DGFYYDF+ ++  + D L  I
Sbjct: 4   DLDKEDILYKKRHSIAHVMAEAVLDLFPNTKIAIGPPIKDGFYYDFEFKKQITEDSLLDI 63

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M+EI+   S F K+ +S E+A E+F+   E YK++++++   +  V++Y+   + DL
Sbjct: 64  ENRMREILKTGSSFEKEIISVEQALEIFK--DEPYKIDLIKNFDLQNEVSIYKSHNFVDL 121

Query: 183 CRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           CRGPHV +  ++  K FKL  +AGAYWRG    PML+RIYGT WN ++EL  YL   EE 
Sbjct: 122 CRGPHVENMNKIDPKAFKLTSIAGAYWRGSEKNPMLTRIYGTLWNNEKELRSYLNLREEI 181

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQV 299
           +KRDHRKL +E+DLF I E+ G G++F+H  G KI   +  + R +  K+ Y+ + TP +
Sbjct: 182 KKRDHRKLGKELDLFSIHEEIGPGLVFFHPNGAKIRALIEDFWREEHSKNGYDILFTPHI 241

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               LWQ SGH D Y+ +MF     +    D   + LKPMNCP H+A++N G  SYR+LP
Sbjct: 242 GKSWLWQTSGHLDFYKDSMF-----EKIEMDKSDYYLKPMNCPFHIAIYNTGKHSYRDLP 296

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
            R AE G+VYR E  G+LHG+MR RGFTQDDAH+ CT  Q+ +E  ++    I ++  FG
Sbjct: 297 FRWAELGTVYRYEKIGALHGMMRARGFTQDDAHIICTHSQVLDEIKEVLRFAIYMWSKFG 356

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F      LST+P+K VG+D+ W+ +  +++  L   +      +   +  G GAFYGPK 
Sbjct: 357 FSNPKAYLSTKPDKSVGNDSDWEMSLKVLEETLSDFE------VPYEIDKGGGAFYGPKI 410

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +  + D++ R+WQ  TIQ DFNLP RFN  Y     ++  P MIHRA+ GSIERF GI++
Sbjct: 411 DLKIVDSLEREWQMSTIQFDFNLPERFNMTYTAEDGKEKRPFMIHRALLGSIERFFGILV 470

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E++ G  PLWLSP+Q ++  + +   +YA ++ N  K+  + I+ D  +  +N KIRE+ 
Sbjct: 471 EHYGGAFPLWLSPVQVVIIPVNNIVEDYAIKVFNKFKNEGIRIKLDNSSSRMNAKIREYQ 530

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            KKIP + I G++EA+E  I IR   +     + L +A+  +
Sbjct: 531 AKKIPYMFIIGEREATEERISIRTRTNEQINGMKLDEALKFI 572


>gi|194246566|ref|YP_002004205.1| Threonyl-tRNA synthetase [Candidatus Phytoplasma mali]
 gi|254783531|sp|B3R0I8|SYT_PHYMT RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|193806923|emb|CAP18352.1| Threonyl-tRNA synthetase [Candidatus Phytoplasma mali]
          Length = 640

 Score =  507 bits (1304), Expect = e-141,   Method: Composition-based stats.
 Identities = 215/647 (33%), Positives = 364/647 (56%), Gaps = 23/647 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+   +G  + F        + +   +   K AVA   N K+ +L+ P+  +G++EII
Sbjct: 1   MIKIKLKNGLEEYFSCGTDVLTIIKKYLKKSEKTAVAAFFNQKLIELNTPLKEDGTLEII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQ 121
             +   SL ++ H+ +H+M  A+   +P +    G   E+GFYYD D  E   S+ +   
Sbjct: 61  NFKHIESLKMLNHTTSHLMLHALSIKYPNILPTSGNFNEEGFYYDIDFQEHKISNHDFDS 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEKKM +I  +    LK+  ++E+A E+F+     YK E+L+    K  + +Y+QG++ D
Sbjct: 121 IEKKMHQIAEKKLDILKKEFTYEQALEIFK--NNHYKKELLQENKNK-KINIYKQGDFID 177

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LC   H+ +T  +K F KL+K++GAY++G+SNR  + RIYGT++  + +L  +L  L+E 
Sbjct: 178 LCSDLHIINTKLIKYF-KLLKISGAYFKGNSNRKQIIRIYGTSFFNRNDLNNHLKILQER 236

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           +  DH+ + ++++ F ++++   G+ FW  KG  I + +  Y+  +++   YE + TP +
Sbjct: 237 KMSDHKYINKDLNFFMLSQEVGLGLPFWLSKGSTIRRIIERYIVDKELIGGYEHVYTPVI 296

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            + +++  SGH + YR NMF      +       + L+PMNCP H+ ++ + + SY+ELP
Sbjct: 297 ANINIYSTSGHLEHYRDNMFPAMNMPN----GEKYVLRPMNCPHHMMIYKNKIYSYKELP 352

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R E SG++ GL RVR  T +DAH+F   +Q+  E  KI N I  +Y+DF 
Sbjct: 353 IRIAELGMMHRLEKSGAVSGLERVREMTLNDAHIFIRTDQIKEEFKKIVNFIQEVYRDFD 412

Query: 420 FEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
               + +LS R      K    D +W+ AENI+K ++  +K      +N   + GE AFY
Sbjct: 413 INNYIFRLSYRDPLDKKKYFNDDEMWNKAENILKEIMLELK------LNFTEVQGEAAFY 466

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +  A+G +    ++Q+DF LP RFN  YV    +K  P++IHR +  ++ERF 
Sbjct: 467 GPKLDVQVLTALGHEETLSSVQIDFLLPKRFNLTYVGEDGKKYSPILIHRCIVSTMERFF 526

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             ++E +KG  P WL+P+Q I+  I   + + YAQ+I ++L  +   +E + ++ T++YK
Sbjct: 527 SYLLERYKGFFPFWLAPLQVILIPINLDNHLIYAQKIKSILLKNGFRVEINQKDSTLSYK 586

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           IRE    KIP  I+ GDKE  +  I  R +       + +   I +L
Sbjct: 587 IREAQKWKIPYQIVIGDKEIKDDIITFREYKKDLQIMMKIDKFIHLL 633


>gi|298250750|ref|ZP_06974554.1| threonyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
 gi|297548754|gb|EFH82621.1| threonyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
          Length = 624

 Score =  507 bits (1304), Expect = e-141,   Method: Composition-based stats.
 Identities = 227/613 (37%), Positives = 348/613 (56%), Gaps = 48/613 (7%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           L  +RHS AH+MA AVQ +WPE +  +GP I++GFYYD +  +  +  +L +IE+KM+E+
Sbjct: 16  LDRMRHSTAHLMAAAVQLLWPEAKFGVGPAIKNGFYYDIELPEALTPKDLGRIEQKMREL 75

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPA---------------------- 167
             +   + +  +  ++A E    + + YKVE+L  +                        
Sbjct: 76  KNKKLGYDRIEVGIDEAIEEMSKRNQPYKVELLNLLKERGSTAVVQETGDAEAIGLSEGQ 135

Query: 168 --KENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAW 225
                V+ Y+ G + DLCRGPHV  T  +  F KLM +AGAYWRG+ N P L R+YGTA+
Sbjct: 136 EGSTVVSFYQTGHFLDLCRGPHVEDTTHIGVF-KLMSIAGAYWRGNENNPQLQRLYGTAF 194

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMR 284
           NT++EL  YL+ LEES+KRDHR+L +E+DLF  ++  G G+  +  KG  +   L  +++
Sbjct: 195 NTKEELDHYLWLLEESKKRDHRRLGQELDLFAFSDLVGGGLPLFTPKGTLVRDLLEEFVQ 254

Query: 285 R-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPG 343
             +    Y+ ++ P +    L++ SGHW+ ++ ++F V     + K    F +KPMNCP 
Sbjct: 255 SLQEPLGYQRVHIPHITKNDLYKTSGHWEKFQEDIFHV-----SGKSGEDFCMKPMNCPH 309

Query: 344 HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE 403
           H  ++   ++SYRELP+RL+E  +VYR+E  G+LHGL RVR  TQDDAHVFCT +Q+  E
Sbjct: 310 HTQIYASRMRSYRELPIRLSEVTTVYRDELPGTLHGLSRVRAITQDDAHVFCTPDQVQEE 369

Query: 404 CLKIHNLIISIYKDFGFEKIMVK---LSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQ 460
            L+I+++I + YK FG    +         PEK +G+  LW+ A+  ++ VL        
Sbjct: 370 VLRIYSIIENFYKPFGMTLAVRLSLWDEEHPEKYLGTPELWNSAQEQLRAVL------RM 423

Query: 461 DRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHP 520
             I     +GE AFYGPK ++   DA+ R WQ  TIQ+DFNLP RFN  Y+        P
Sbjct: 424 KGIEWVEEVGEAAFYGPKIDFTALDALERTWQLATIQLDFNLPERFNLEYMGPDGHAARP 483

Query: 521 VMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH- 579
           VM+HRAV GS+ERF+ ++IE++ G  P WLSP+QA++  I    ++YA ++   L     
Sbjct: 484 VMLHRAVLGSVERFMSVLIEHYAGAFPTWLSPVQAMIIPIADRHLDYAYQVKQSLLDVRL 543

Query: 580 ------LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
                 + +E D   E++  KIR   ++K+P +++ GDKEA    + +R         +S
Sbjct: 544 SSARESIRVEVDEARESMQKKIRNAQLQKVPYMLVLGDKEAENGEVNVRHRSGVNLGTLS 603

Query: 634 LLDAIPILTKESL 646
           +      + +E L
Sbjct: 604 VSALAERIKQEIL 616


>gi|216264494|ref|ZP_03436486.1| threonyl-tRNA synthetase [Borrelia burgdorferi 156a]
 gi|215980967|gb|EEC21774.1| threonyl-tRNA synthetase [Borrelia burgdorferi 156a]
          Length = 581

 Score =  506 bits (1303), Expect = e-141,   Method: Composition-based stats.
 Identities = 244/582 (41%), Positives = 361/582 (62%), Gaps = 16/582 (2%)

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
             +    L   RHS AH+MAEAV  ++P  ++AIGP I+DGFYYDF+ ++  + D L  I
Sbjct: 4   DLDKEDILYKKRHSIAHVMAEAVLDLFPNTKIAIGPPIKDGFYYDFEFKKQITEDSLLDI 63

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M+EI+   S F K+ +S E+A E+F+   E YK++++++   +  V++Y+   + DL
Sbjct: 64  ENRMREILKTGSSFEKEIISVEQALEIFK--DEPYKIDLIKNFDLQNEVSIYKSHNFVDL 121

Query: 183 CRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           CRGPHV +  ++  K FKL  +AGAYWRG    PML+RIYGT WN ++EL  YL   EE 
Sbjct: 122 CRGPHVENMNKIDPKAFKLTSIAGAYWRGSEKNPMLTRIYGTLWNNEKELRSYLNLREEI 181

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQV 299
           +KRDHRKL +E+DLF I E+ G G++F+H  G KI   +  + R +  K+ Y+ + TP +
Sbjct: 182 KKRDHRKLGKELDLFSIHEEIGPGLVFFHPNGAKIRALIEDFWREEHSKNGYDILFTPHI 241

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               LWQ SGH D Y+ +MF     +    D   + LKPMNCP H+A++N G  SYR+LP
Sbjct: 242 GKSWLWQTSGHLDFYKDSMF-----EKIEMDKSDYYLKPMNCPFHIAIYNTGKHSYRDLP 296

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
            R AE G+VYR E  G+LHG+MR RGFTQDDAH+ CT  Q+ +E  ++    I ++  FG
Sbjct: 297 FRWAELGTVYRYEKIGALHGMMRARGFTQDDAHIICTHSQVLDEIKEVLRFAIYMWSKFG 356

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F  +   LST+P+K VG+D+ W+ +  +++  L   +      +   +  G GAFYGPK 
Sbjct: 357 FSNLKAYLSTKPDKSVGNDSDWEMSLKVLEETLSDFE------VPYEIDKGGGAFYGPKI 410

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +  + D++ R+WQ  TIQ DFNLP RFN  Y     ++  P MIHRA+ GSIERF GI++
Sbjct: 411 DLKIVDSLEREWQMSTIQFDFNLPERFNMTYTAEDGKEKRPFMIHRALLGSIERFFGILV 470

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E++ G  PLWLSP+Q ++  + +   +YA ++ N  K+  + I+ D  +  +N KIRE+ 
Sbjct: 471 EHYGGAFPLWLSPVQVVIIPVNNIVEDYAIKVFNKFKNEGIRIKLDNSSSRMNAKIREYQ 530

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            KKIP + I G++EA+E  I IR   +     + L +A+  +
Sbjct: 531 AKKIPYMFIIGEREATEERISIRTRTNEQINGMKLDEALKFI 572


>gi|261368006|ref|ZP_05980889.1| threonine--tRNA ligase [Subdoligranulum variabile DSM 15176]
 gi|282569994|gb|EFB75529.1| threonine--tRNA ligase [Subdoligranulum variabile DSM 15176]
          Length = 596

 Score =  506 bits (1303), Expect = e-141,   Method: Composition-based stats.
 Identities = 205/598 (34%), Positives = 339/598 (56%), Gaps = 23/598 (3%)

Query: 55  REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQP 113
           ++G++     +    L V+RH+ AHIMA+A++ ++PE   A GP  E+GFYYD D  +  
Sbjct: 6   KDGTVAECPQDQE--LHVLRHTAAHIMAQAIKRLYPEADFAFGPATENGFYYDVDLGDTK 63

Query: 114 FSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTL 173
            + ++LA IEK+M++I   + P     L  ++A +L + ++E YK+E +  +  +   + 
Sbjct: 64  LTDEDLAAIEKEMRKICKENLPIKPFILPRDEALKLMQERQEHYKIEHMSDLADETEFSF 123

Query: 174 YRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQ 233
           ++QGE+ D+C GPH+  T  +K F K+ + +GAYW+ D    ML+RI G A++ Q+EL +
Sbjct: 124 FQQGEYVDMCIGPHLTYTKALKAF-KITQQSGAYWKNDKENKMLTRINGVAFHNQEELEE 182

Query: 234 YLYFLEESEKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYM-RRKIKDDY 291
           +    +E+ +RDHRK+ +EM LF   +  G G+  +   G+ ++Q L  Y+ +++ +  Y
Sbjct: 183 WEKQQQEARERDHRKIGKEMRLFMTDDLVGRGLPMFLPNGYIVWQQLEDYIKQKERERGY 242

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
             + TP +   +L++ SGHWD YR NMF          +  ++ L+PMNCP H+ ++ + 
Sbjct: 243 LHVMTPCIGTVNLYRTSGHWDHYRENMFPAMEM-----EGESYVLRPMNCPHHMMIYANQ 297

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI 411
             SYR+LP+R+ E    +R E SG+L G+ R R F Q+DAH+F T EQ+ +E   +  LI
Sbjct: 298 PHSYRQLPIRIGEIAHDFRYESSGTLKGIERGRHFCQNDAHLFVTPEQIKDEVAAVCALI 357

Query: 412 ISIYKDFGFEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGV 467
             +YKDF        LS R      K    DA+W+ AE  ++ VL  +       I    
Sbjct: 358 FDVYKDFHITDYRCVLSLRDPADKKKYHDDDAMWNHAEQALREVLTELG------IQFTE 411

Query: 468 LLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAV 527
            +GE AFYGPK +  +K A+G ++   T Q+DF LP++F+  YV+    +  PV++HRA+
Sbjct: 412 EIGEAAFYGPKLDVNVKPAVGAEYTLSTCQLDFCLPAKFHLTYVDKDGSEKTPVVLHRAI 471

Query: 528 FGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR 587
            GS++RF+  +IE  KG  P WL+P+Q  V  ++   ++YA+E+ + LK+  +    D  
Sbjct: 472 LGSLDRFMAYLIEETKGRFPTWLAPVQVKVLPVSEKTLDYAREVNDKLKAAGIRAVLDES 531

Query: 588 NETINYKIREHSIK-KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           NE I YKIR    + + P +++ G KE    +I +R      T  + L   +  +  E
Sbjct: 532 NEKIGYKIRLAQQEDRAPYMLVLGAKEVEAGNISVRNRKG-ETTAMDLDAFVAQVKDE 588


>gi|325997000|gb|ADZ49208.1| Threonyl-tRNA synthetase [Helicobacter pylori 2017]
          Length = 573

 Score =  506 bits (1303), Expect = e-141,   Method: Composition-based stats.
 Identities = 228/580 (39%), Positives = 350/580 (60%), Gaps = 19/580 (3%)

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            + P +L VIRHSCAH++A+++++++P+ +  +GP++E+GFYYDF      S ++L +IE
Sbjct: 2   IDSPLALEVIRHSCAHLLAQSLKALYPDAKFFVGPVVEEGFYYDFKTSSKISEEDLPKIE 61

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            KM+E         K+ L+ E+A E F+   +  K  ++  I       +Y+QGE+ DLC
Sbjct: 62  AKMKEFAKLKLAIAKEILTREQALERFK--GDELKHAVMSKISGD-IFGVYKQGEFEDLC 118

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           +GPH+ +T  +  F KL K+AGAY  GD N  ML RIYG A+ T++ L  YL+ +EE++K
Sbjct: 119 KGPHLPNTRFLNHF-KLTKLAGAYLGGDENNEMLIRIYGIAFATKEGLKDYLFQIEEAKK 177

Query: 244 RDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD 301
           RDHRKL  E+ LF   ++ G+G+  W  KG ++ + +   + + +    YE +  P++L 
Sbjct: 178 RDHRKLGVELGLFSFDDEIGAGLPLWLPKGARLRKRIEDLLSKALLLRGYEPVKGPEILK 237

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             +W+ SGH+D+Y+ NM+       T  D + + +KPMNC GH+ V+   L SYR+LP+R
Sbjct: 238 SDVWKISGHYDNYKENMYF------TTIDEQEYGIKPMNCVGHIKVYQSALHSYRDLPLR 291

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
             E+G V+R+E SG LHGL+RVR FTQDDAH+FC+ EQ+ +E   I +    I K F F 
Sbjct: 292 FYEYGVVHRHEKSGVLHGLLRVREFTQDDAHIFCSFEQIQSEVSAILDFTHKIMKAFDFS 351

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
             M +LSTRP K +G D +W+ A N +K  L       + RI+  +  G GAFYGPK + 
Sbjct: 352 YEM-ELSTRPAKSIGDDEVWEKATNALKEALK------EHRIDYKIDEGGGAFYGPKIDI 404

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            + DA+ R WQCGTIQVD NLP RF   + N  +    PVMIHRA+ GS ERFI I+ E+
Sbjct: 405 KITDALKRKWQCGTIQVDMNLPERFKLAFTNERNHAEQPVMIHRAILGSFERFIAILSEH 464

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           F GN P +++P Q  +  I      +A ++   LK   + +E   +N+++N K+R    +
Sbjct: 465 FGGNFPFFVAPTQIALIPINEEHHVFALKLKEELKKRDIFVEVLDKNDSLNKKVRLAEKQ 524

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           KIP+I++ G++E     + IR        K+ L + + ++
Sbjct: 525 KIPMILVLGNEEVETEILSIRDREKQAQYKMPLKEFLNMV 564


>gi|203284615|ref|YP_002222355.1| threonyl-tRNA synthetase [Borrelia duttonii Ly]
 gi|238690570|sp|B5RMR3|SYT_BORDL RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|201084058|gb|ACH93649.1| threonyl-tRNA synthetase [Borrelia duttonii Ly]
          Length = 583

 Score =  506 bits (1302), Expect = e-141,   Method: Composition-based stats.
 Identities = 242/573 (42%), Positives = 357/573 (62%), Gaps = 17/573 (2%)

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           RHS AH+MAEAV  ++P  ++AIGP I+DGFYYDFD E+  S D+L  IE KM+EI+   
Sbjct: 15  RHSIAHVMAEAVLELFPNTKIAIGPPIKDGFYYDFDFEKHISEDDLLLIEHKMREILKTG 74

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQ 193
           SPF+++ ++ E+A  LF+   E YK++++++    + +T+Y+  ++ DLCRGPHV +  +
Sbjct: 75  SPFIREVITREQALVLFK--DEPYKIDLIQNFDVTDEITIYKSHKFTDLCRGPHVDNMNK 132

Query: 194 V-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLARE 252
           +  K FKL  +AGAYWRGD    MLSRIYGT WN +++L  YL   EE +KRDHRKL RE
Sbjct: 133 LDPKAFKLTSIAGAYWRGDERNKMLSRIYGTLWNNEKDLKAYLKLQEEIKKRDHRKLGRE 192

Query: 253 MDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGH 310
           ++LF + ++ G G+IF+H  G +I   + ++ R +  K+ Y+ + TP +    LW+ SGH
Sbjct: 193 LNLFSVHDEIGPGLIFFHPHGARIRALIENFWREEHFKNGYDILFTPHIGKSWLWETSGH 252

Query: 311 WDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYR 370
            D Y+ +MF     +    D   + +KPMNCP H+A++N    SYR+LP R AE G+VYR
Sbjct: 253 LDFYKESMF-----EKIEMDRSDYYVKPMNCPFHIAIYNTDKHSYRDLPFRWAELGTVYR 307

Query: 371 NEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR 430
            E  G++HG MRVRGFTQDDAH+ CT EQ+  E  ++    I ++  FGF  +   LST+
Sbjct: 308 YEKIGAIHGTMRVRGFTQDDAHIICTYEQVNFEVREVLRFAIDMWNKFGFTNLKAYLSTK 367

Query: 431 PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRD 490
           PEK VG D  W  A  +++  L          I+  +  G GAFYGPK +  + D++GR 
Sbjct: 368 PEKAVGDDDDWQMAVKVLEKALIDFN------IDFDIDEGGGAFYGPKIDLKIIDSLGRA 421

Query: 491 WQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL 550
           WQ  TIQ DFNLP RF   Y     ++  P MIHRA+ GSIERF GI++E++ G  P+WL
Sbjct: 422 WQMSTIQFDFNLPVRFKMTYTAEDGKEKRPFMIHRALLGSIERFFGILVEHYGGAFPVWL 481

Query: 551 SPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FRNETINYKIREHSIKKIPIIIIC 609
           +P+Q ++  + S   EYA E+ +  ++  + I+ D + N  +N KIR++  KK+P + I 
Sbjct: 482 APLQVVIIPVNSIVEEYALEVLSRFQNEGIRIKFDNYCNMRMNAKIRQYQSKKVPYMFII 541

Query: 610 GDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           G++E  E  I IR   +     + L +A+  + 
Sbjct: 542 GEREVVEGKISIRTRTNEQINGLELKEALEFVK 574


>gi|313904501|ref|ZP_07837877.1| threonyl-tRNA synthetase [Eubacterium cellulosolvens 6]
 gi|313470643|gb|EFR65969.1| threonyl-tRNA synthetase [Eubacterium cellulosolvens 6]
          Length = 591

 Score =  506 bits (1302), Expect = e-141,   Method: Composition-based stats.
 Identities = 235/583 (40%), Positives = 356/583 (61%), Gaps = 15/583 (2%)

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVA--IGPIIEDGFYYDFDKEQPFSSDELAQ 121
            E    LAV RHS AHI+A+AV  ++ + +V   IGP IE+G YYDF   +  ++D+   
Sbjct: 1   MEKEEFLAVYRHSMAHILAKAVIELFGKEKVQYAIGPQIENGLYYDFTLPRTLTADDYKM 60

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE-WF 180
           IE KM+E+I R   +  + ++ ++A ELF+   + +K E+++ +PA E +T+Y  G+ + 
Sbjct: 61  IEDKMREVIKRREDWTCKEVTKDEALELFK--DQKFKTELIQELPADEKITIYYTGDDYV 118

Query: 181 DLCRGPHVRSTGQ-VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           DLCRGPHV ++ + +   F++  ++GAYWRGD  +  L RIY TA+  + +L ++  FL 
Sbjct: 119 DLCRGPHVSNSQELMNVAFEVRSISGAYWRGDETKDQLQRIYVTAFADKNQLKEFKKFLR 178

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+ +RDH+KL  + +LF   E   G+ +W  +GWK+F +L+S+ R    +  Y+EI+ P 
Sbjct: 179 EAAERDHKKLGPQQELFMFDETAPGMPYWLPRGWKLFNSLLSFWRGIHEEHGYQEISGPI 238

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           + +  LWQ SGHW  Y+ NMF +    +   D   +A KPMNCP  + V+   L+SYR+L
Sbjct: 239 LSNSKLWQTSGHWGHYKDNMFIIPGEKEDESDY--YAAKPMNCPNAILVYKSRLRSYRDL 296

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P R+A+  +++R E SG L+GL RV+ F QDDAH+  T++Q+ +E   I ++   IY  F
Sbjct: 297 PFRVAQVDNIHRKEKSGELNGLFRVQMFRQDDAHILVTEDQIADEIKDIMSIATQIYGTF 356

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           G      +LSTRP+  +G  A+WD AE  +K +L+ +        N  V  G+GAFYGPK
Sbjct: 357 GLSYGA-ELSTRPDDFMGDIAVWDKAEASLKEILNDVYGEG----NYEVNEGDGAFYGPK 411

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +  +KDA+GR+WQ GTIQ+DF LP  F+  Y         PVMIHRA+FGS+ERFIGI+
Sbjct: 412 IDLKMKDALGREWQMGTIQLDFQLPLNFDMKYAAQDGTVKQPVMIHRAIFGSLERFIGIL 471

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IEN+K + P WLSP Q  V  I +   EYA+++ + LK+  + +E D+ ++ +N KI+  
Sbjct: 472 IENYKASFPFWLSPYQVGVVPIRTEHNEYAKKVVDALKAAGIRVEVDYADKNMNEKIKAF 531

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTT-QKVSLLDAIPI 640
                P II+ GDKEASE ++ I   G       VSL   + +
Sbjct: 532 KTYHDPYIIVVGDKEASEGTVSITVRGQKQQLHDVSLEKLVEM 574


>gi|195941538|ref|ZP_03086920.1| threonyl-tRNA synthetase (thrZ) [Borrelia burgdorferi 80a]
 gi|312149456|gb|ADQ29527.1| threonyl-tRNA synthetase [Borrelia burgdorferi N40]
          Length = 581

 Score =  506 bits (1302), Expect = e-141,   Method: Composition-based stats.
 Identities = 244/582 (41%), Positives = 361/582 (62%), Gaps = 16/582 (2%)

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
             +    L   RHS AH+MAEAV  ++P  ++AIGP I+DGFYYDF+ ++  + D L  I
Sbjct: 4   DLDKEDILYKKRHSIAHVMAEAVLDLFPNTKIAIGPPIKDGFYYDFEFKKQITEDSLLDI 63

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M+EI+   S F K+ +S E+A E+F+   E YK++++++   +  V++Y+   + DL
Sbjct: 64  ENRMREILKTGSSFEKEIISVEQALEIFK--DEPYKIDLIKNFDLQNEVSIYKSHNFVDL 121

Query: 183 CRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           CRGPHV +  ++  K FKL  +AGAYWRG    PML+RIYGT WN ++EL  YL   EE 
Sbjct: 122 CRGPHVENMNKIDPKAFKLTSIAGAYWRGSEKNPMLTRIYGTLWNNEKELRSYLNLREEI 181

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQV 299
           +KRDHRKL +E+DLF I E+ G G++F+H  G KI   +  + R +  K+ Y+ + TP +
Sbjct: 182 KKRDHRKLGKELDLFSIHEEIGPGLVFFHPNGAKIRALIEDFWREEHSKNGYDILFTPHI 241

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               LWQ SGH D Y+ +MF     +    D   + LKPMNCP H+A++N G  SYR+LP
Sbjct: 242 GKSWLWQTSGHLDFYKDSMF-----EKIEMDKSDYYLKPMNCPFHIAIYNTGKHSYRDLP 296

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
            R AE G+VYR E  G+LHG+MR RGFTQDDAH+ CT  Q+ +E  ++    I ++  FG
Sbjct: 297 FRWAELGTVYRYEKIGALHGMMRARGFTQDDAHIICTHSQVLDEIKEVLRFAIYMWSKFG 356

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F  +   LST+P+K VG+D+ W+ +  +++  L   +      +   +  G GAFYGPK 
Sbjct: 357 FSNLKAYLSTKPDKSVGNDSDWEMSLKVLEETLSDFE------VPYEIDKGGGAFYGPKI 410

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +  + D++ R+WQ  TIQ DFNLP RFN  Y     ++  P MIHRA+ GSIERF GI++
Sbjct: 411 DLKIVDSLEREWQMSTIQFDFNLPERFNMTYTAEDGKEKRPFMIHRALLGSIERFFGILV 470

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E++ G  PLWLSP+Q ++  + +   +YA ++ N  K+  + I+ D  +  +N KIRE+ 
Sbjct: 471 EHYGGAFPLWLSPVQVVIIPVNNIVEDYAIKVFNKFKNEGIRIKLDNSSSRMNAKIREYQ 530

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            KKIP + I G++EA+E  I IR   +     + L +A+  +
Sbjct: 531 AKKIPYMFIIGEREATEERISIRTRTNEQINGIKLDEALKFI 572


>gi|225551832|ref|ZP_03772775.1| threonyl-tRNA synthetase [Borrelia sp. SV1]
 gi|225371627|gb|EEH01054.1| threonyl-tRNA synthetase [Borrelia sp. SV1]
          Length = 581

 Score =  505 bits (1301), Expect = e-141,   Method: Composition-based stats.
 Identities = 246/582 (42%), Positives = 361/582 (62%), Gaps = 16/582 (2%)

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
             +    L   RHS AH+MAEAV  ++P  ++AIGP I+DGFYYDF+ ++  + D L  I
Sbjct: 4   DLDKEDILYKKRHSIAHVMAEAVLDLFPNTKIAIGPPIKDGFYYDFEFKKQITEDSLLDI 63

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M+EI+   S F K+ +S E+A E+F+   E YK++++++   +  V++Y+   + DL
Sbjct: 64  ENRMREILKTGSSFEKEIISVEQALEIFK--DEPYKIDLIKNFDLQNEVSIYKSHNFVDL 121

Query: 183 CRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           CRGPHV +  ++  K FKL  +AGAYWRG    PML+RIYGT WN ++EL  YL   EE 
Sbjct: 122 CRGPHVENMNKIDPKAFKLTSIAGAYWRGSEKNPMLTRIYGTLWNNEKELRSYLNLREEI 181

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQV 299
           +KRDHRKL +E+DLF I E+ G G++F+H  G KI   +  + R +  K+ Y+ + TP V
Sbjct: 182 KKRDHRKLGKELDLFSIHEEIGPGLVFFHPNGAKIRALIEDFWREEHSKNGYDILFTPHV 241

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               LWQ SGH D Y+ +MFA         D   + LKPMNCP H+A++N G  SYR+LP
Sbjct: 242 GKSWLWQTSGHLDFYKDSMFA-----KIEMDKSDYYLKPMNCPFHIAIYNTGKHSYRDLP 296

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
            R AE G+VYR E  G+LHG+MR RGFTQDDAH+ CT  Q+ +E  ++    I ++  FG
Sbjct: 297 FRWAELGTVYRYEKIGALHGMMRARGFTQDDAHIICTHSQVLDEIKEVLRFAIYMWSKFG 356

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F  +   LST+P+K VG+D+ W+ +  +++  L   +      +   +  G GAFYGPK 
Sbjct: 357 FSNLKAYLSTKPDKSVGNDSDWEMSLKVLEETLSDFE------VPYEIDKGGGAFYGPKI 410

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +  + D++ R+WQ  TIQ DFNLP RFN  Y     ++  P MIHRA+ GSIERF GI++
Sbjct: 411 DLKIVDSLEREWQMSTIQFDFNLPERFNMTYTAEDGKEKRPFMIHRALLGSIERFFGILV 470

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E++ G  PLWLSP+Q ++  + +   +YA ++ N  K+  + I+ D  +  +N KIRE+ 
Sbjct: 471 EHYGGAFPLWLSPVQVVIIPVNNIVEDYAIKVFNKFKNEGIRIKLDNSSSRMNAKIREYQ 530

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            KKIP + I G++EA+E  I IR   +     + L +A+  +
Sbjct: 531 AKKIPYMFIIGEREATEERISIRTRTNEQINGIKLDEALKFI 572


>gi|224532379|ref|ZP_03673009.1| threonine--tRNA ligase [Borrelia burgdorferi WI91-23]
 gi|224512686|gb|EEF83057.1| threonine--tRNA ligase [Borrelia burgdorferi WI91-23]
          Length = 581

 Score =  505 bits (1301), Expect = e-141,   Method: Composition-based stats.
 Identities = 244/582 (41%), Positives = 361/582 (62%), Gaps = 16/582 (2%)

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
             +    L   RHS AH+MAEAV  ++P  ++AIGP I+DGFYYDF+ ++  + D L  I
Sbjct: 4   DLDKEDILYKKRHSIAHVMAEAVLDLFPNTKIAIGPPIKDGFYYDFEFKKQITEDSLLDI 63

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M+EI+   S F K+ +S E+A E+F+   E YK++++++   +  V++Y+   + DL
Sbjct: 64  ENRMREILKTGSSFEKEIISVEQALEIFK--DEPYKIDLIKNFDLQNEVSIYKSHNFVDL 121

Query: 183 CRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           CRGPHV +  ++  K FKL  +AGAYWRG    PML+RIYGT WN ++EL  YL   EE 
Sbjct: 122 CRGPHVENMNKIDPKAFKLTSIAGAYWRGSEKNPMLTRIYGTLWNNEKELRSYLNLREEI 181

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQV 299
           +KRDHRKL +E+DLF I E+ G G++F+H  G KI   +  + R +  K+ Y+ + TP +
Sbjct: 182 KKRDHRKLGKELDLFSIHEEIGPGLVFFHPNGAKIRALIEDFWREEHSKNGYDILFTPHI 241

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               LWQ SGH D Y+ +MF     +    D   + LKPMNCP H+A++N G  SYR+LP
Sbjct: 242 GKSWLWQTSGHLDFYKDSMF-----EKIEMDKSDYYLKPMNCPFHIAIYNTGKHSYRDLP 296

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
            R AE G+VYR E  G+LHG+MR RGFTQDDAH+ CT  Q+ +E  ++    I ++  FG
Sbjct: 297 FRWAELGTVYRYEKIGALHGMMRARGFTQDDAHIICTHSQVLDEIKEVLRFAIYMWSKFG 356

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F  +   LST+P+K VG+D+ W+ +  +++  L   +      +   +  G GAFYGPK 
Sbjct: 357 FSNLKAYLSTKPDKSVGNDSDWEMSLKVLEETLSDFE------VPYEIDKGGGAFYGPKI 410

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +  + D++ R+WQ  TIQ DFNLP RFN  Y     ++  P MIHRA+ GSIERF GI++
Sbjct: 411 DLKIVDSLEREWQMSTIQFDFNLPERFNMTYTAEDGKEKRPFMIHRALLGSIERFFGILV 470

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E++ G  PLWLSP+Q ++  + +   +YA ++ N  K+  + I+ D  +  +N KIRE+ 
Sbjct: 471 EHYGGAFPLWLSPVQVVIIPVNNIVEDYAIKVFNKFKNGGIRIKLDNSSSRMNAKIREYQ 530

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            KKIP + I G++EA+E  I IR   +     + L +A+  +
Sbjct: 531 AKKIPYMFIIGEREATEERISIRTRTNEQINGIKLDEALKFI 572


>gi|119953497|ref|YP_945706.1| threonyl-tRNA synthetase [Borrelia turicatae 91E135]
 gi|254783510|sp|A1R0E4|SYT_BORT9 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|119862268|gb|AAX18036.1| threonyl-tRNA synthetase [Borrelia turicatae 91E135]
          Length = 583

 Score =  505 bits (1301), Expect = e-141,   Method: Composition-based stats.
 Identities = 240/582 (41%), Positives = 358/582 (61%), Gaps = 17/582 (2%)

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           +    L   RHS AH+MAEAV  ++P  ++AIGP I+DGFYYDFD E+    D+L  IE+
Sbjct: 6   DKEDVLYKKRHSIAHVMAEAVIELFPNTKIAIGPPIKDGFYYDFDFEKHIIEDDLLLIEQ 65

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
           KM+EI+   S F+K+ ++ E+A  LF+   E YK++++  +   + +++Y+   + DLC+
Sbjct: 66  KMREILKTGSSFVKEVITKEQALMLFK--DEPYKIDLIHELDIADEISIYKSHNFTDLCK 123

Query: 185 GPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           GPH+ + G++  K FKL+ +AGAYWRGD    ML+RIYGT WN +++L  YL   EE ++
Sbjct: 124 GPHIDNMGKIDPKAFKLISIAGAYWRGDEKNKMLTRIYGTLWNNEKDLKAYLKLREEIKR 183

Query: 244 RDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLD 301
           RDHRKL RE+DLF + E+ G G+IF+H  G +I   +  + R +  K+ Y+ + TP V  
Sbjct: 184 RDHRKLGRELDLFSVHEEIGPGLIFFHPSGARIRALIEDFWREEHFKNGYDILFTPHVGK 243

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             LW+ SGH D Y+ +MF          D   + +KPMNCP H+A++N G  SYR+LP R
Sbjct: 244 SWLWETSGHLDFYKESMFEKMEM-----DKSNYYVKPMNCPFHIAIYNTGRHSYRDLPFR 298

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
            AE G+VYR E  G+LHG MRVRGFTQDDAH+ CT +Q+  E  ++    + ++  FGF 
Sbjct: 299 WAELGTVYRYEKVGALHGTMRVRGFTQDDAHIICTYDQVKFEVQEVLRFALYMWNKFGFT 358

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            +   LST+PEK VG +  W  +  ++K  L  +       I+  +  G GAFYGPK + 
Sbjct: 359 ALKAYLSTKPEKSVGDEDDWIMSVKVLKEALINLG------IDYDIDEGGGAFYGPKIDL 412

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            + D++GR+WQ  TIQ DFNLP+RF   Y     ++  P MIHRA+ GSIERF GI++E+
Sbjct: 413 KIIDSLGREWQMSTIQFDFNLPARFKMTYTAEDGKERQPFMIHRALLGSIERFFGILVEH 472

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIREHSI 600
           + G  P+WL+P+Q ++  + +   EYA E+ +  K   + I+ D   N  +N KIR++  
Sbjct: 473 YGGAFPVWLAPLQVVIIPVNNIVEEYALEVLSRFKKEGIRIKLDNDCNMRMNAKIRQYQS 532

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +K+P + I G+KE  E  I IR   +     + L +A+  + 
Sbjct: 533 QKVPYMFIVGEKEVVEGKISIRTRTNEQINGLELKEALEFVK 574


>gi|221217966|ref|ZP_03589433.1| threonyl-tRNA synthetase [Borrelia burgdorferi 72a]
 gi|224533347|ref|ZP_03673941.1| threonyl-tRNA synthetase [Borrelia burgdorferi CA-11.2a]
 gi|225549973|ref|ZP_03770934.1| threonyl-tRNA synthetase [Borrelia burgdorferi 118a]
 gi|221192272|gb|EEE18492.1| threonyl-tRNA synthetase [Borrelia burgdorferi 72a]
 gi|224513512|gb|EEF83869.1| threonyl-tRNA synthetase [Borrelia burgdorferi CA-11.2a]
 gi|225369432|gb|EEG98884.1| threonyl-tRNA synthetase [Borrelia burgdorferi 118a]
          Length = 581

 Score =  505 bits (1300), Expect = e-140,   Method: Composition-based stats.
 Identities = 244/582 (41%), Positives = 359/582 (61%), Gaps = 16/582 (2%)

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
             +    L   RHS AH+MAEAV  ++P  ++AIGP I+DGFYYDF+ ++  + D L  I
Sbjct: 4   DLDKEDILYKKRHSIAHVMAEAVLDLFPNTKIAIGPPIKDGFYYDFEFKKQITEDSLLDI 63

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M+EI+   S F K+ +S E+A E+F+   E YK++++++   +  V++Y+   + DL
Sbjct: 64  ENRMREILKTGSSFEKEIISVEQALEIFK--DEPYKIDLIKNFDLQNEVSIYKSHNFVDL 121

Query: 183 CRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           CRGPHV +  ++  K FKL  +AGAYWRG    PML+RIYGT WN ++EL  YL   EE 
Sbjct: 122 CRGPHVENMNKIDPKAFKLTSIAGAYWRGSEKNPMLTRIYGTLWNNEKELRSYLNLREEI 181

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQV 299
           +KRDHRKL +E+DLF I E+ G G++F+H  G KI   +  + R +  K+ Y+ + TP +
Sbjct: 182 KKRDHRKLGKELDLFSIHEEIGPGLVFFHPNGAKIRALIEDFWREEHSKNGYDILFTPHI 241

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               LWQ SGH D Y+ +MF     +    D   + LKPMNCP H+A++N G  SYR+LP
Sbjct: 242 GKSWLWQTSGHLDFYKDSMF-----EKIEMDKSDYYLKPMNCPFHIAIYNTGKHSYRDLP 296

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
            R AE G+VYR E  G+LHG+MR RGFTQDDAH+ CT  Q+ +E  ++    I ++  FG
Sbjct: 297 FRWAELGTVYRYEKIGALHGMMRARGFTQDDAHIICTHSQVLDEIKEVLRFAIYMWSKFG 356

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F      LST+P+K VG+D+ W+ +  +++  L   +      +   +  G GAFYGPK 
Sbjct: 357 FSNPKAYLSTKPDKSVGNDSDWEMSLKVLEETLSDFE------VPYEIDKGGGAFYGPKI 410

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +  + D++ R+WQ  TIQ DFNLP RFN  Y     ++  P MIHRA+ GSIERF GI++
Sbjct: 411 DLKIVDSLEREWQMSTIQFDFNLPERFNMTYTAEDGKEKRPFMIHRALLGSIERFFGILV 470

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E++ G  PLWLSP+Q ++  + +   +YA ++ N  K+  + I+ D  +  +N KIRE+ 
Sbjct: 471 EHYGGAFPLWLSPVQVVIIPVNNIVEDYAIKVFNKFKNEGIRIKLDNSSSRMNAKIREYQ 530

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            KKIP + I G++EA E  I IR   +     + L +A+  +
Sbjct: 531 AKKIPYMFIIGEREAIEERISIRTRTNEQINGMKLDEALKFI 572


>gi|160894708|ref|ZP_02075483.1| hypothetical protein CLOL250_02259 [Clostridium sp. L2-50]
 gi|156863642|gb|EDO57073.1| hypothetical protein CLOL250_02259 [Clostridium sp. L2-50]
          Length = 591

 Score =  505 bits (1300), Expect = e-140,   Method: Composition-based stats.
 Identities = 215/594 (36%), Positives = 357/594 (60%), Gaps = 25/594 (4%)

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDEL 119
           ++  +    L  + HSCAH+MA+AV+ ++P  +  +GP++++GFYYD D  +   + D +
Sbjct: 1   MVDFKADERLNTLNHSCAHVMAQAVKHLYPHAKFWVGPVVKEGFYYDIDLGDDVVNDDVI 60

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A IEK+M++I        ++ ++  +A E+F+   + YK++++E +    N+T+Y QG++
Sbjct: 61  AAIEKEMKKICKESKKIYRREVTKAEALEMFK--DDFYKLDLIEGL-EDGNITVYDQGDF 117

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV +T   K F KL+K +G YW+GD+   ++ RIYG  + T +EL ++L  LE
Sbjct: 118 TDLCRGPHVDNTKLCKNF-KLVKYSGVYWKGDAKNHVMQRIYGVCFPTAEELEEHLKLLE 176

Query: 240 ESEKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTP 297
           E++ RDHRK+ +EM+LF   +  G G+  +  KG+ ++Q L +Y++ ++ K  Y  + TP
Sbjct: 177 EAKDRDHRKIGKEMNLFMSDDLVGRGLPMFLPKGYIVWQELENYIKNKERKLGYRHVMTP 236

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            V   +L++ SGHWD Y+ NMF          +  +F L+PMNCP H+ ++ + + SY++
Sbjct: 237 CVGTVNLYKTSGHWDHYKDNMFPAMEV-----EGESFVLRPMNCPHHMMIYANKMHSYKD 291

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+ E    +R E SG+L G+ R R F Q+DAH+F T EQ+ +E  ++ +LI   YKD
Sbjct: 292 LPIRIGEIAHDFRFEASGTLKGIERGRHFCQNDAHLFVTPEQIESEFKQVVDLIFDTYKD 351

Query: 418 FGFEKIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           F        LS R      K    D +W+ AE+ ++ VLD I       I     +GE A
Sbjct: 352 FNITDYRCVLSLRDPEDKVKYHDDDEMWNTAEDALRKVLDDIG------IEYTEEIGEAA 405

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  +K AIG ++   T Q+DF LP++FN  Y++    K  PV++HRA+ GS++R
Sbjct: 406 FYGPKLDVNVKPAIGNEYTLSTCQLDFCLPAKFNLTYIDKDGTKKTPVVLHRAILGSLDR 465

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVE---YAQEIANLLKSHHLSIETDFRNET 590
           F+  ++E  KGNLPLWL+P+QA +  + +   E   YA E+ + L  +++ +E D R E 
Sbjct: 466 FMAYILEETKGNLPLWLAPVQARILPVKNEDEELNAYAHELYDFLDDNNIRVEIDERAEK 525

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           + Y++R   ++K+P +II G  E +++++  R  G   T  V + + + +L  E
Sbjct: 526 LGYRVRAAQVEKVPYLIILGKNEVNDKTVSYRLHGEQKTTTVPMDEFLAMLQDE 579


>gi|159109673|ref|XP_001705100.1| Threonyl-tRNA synthetase [Giardia lamblia ATCC 50803]
 gi|157433179|gb|EDO77426.1| Threonyl-tRNA synthetase [Giardia lamblia ATCC 50803]
          Length = 695

 Score =  505 bits (1300), Expect = e-140,   Method: Composition-based stats.
 Identities = 233/672 (34%), Positives = 364/672 (54%), Gaps = 48/672 (7%)

Query: 6   KLTFPDGSIKNFPVHATGSDVAESI--SRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            +T PDG     P   T  DVA+ +  ++ +  K +A   + +V D+S  + +   +E +
Sbjct: 30  TVTLPDGKTTEIPASFTALDVAKQVVKNKKVYSKFLAAVRDDEVIDMSARLGKTCKLEFL 89

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQP--FSSDELA 120
           T +DPR+  V  HS AH++  A++  + +  +  GP I+ GF+YD   E       + L 
Sbjct: 90  TFDDPRAREVFWHSSAHLLGYALEKTF-QAHLGHGPAIDSGFFYDAFFENSLKMEPESLL 148

Query: 121 QIEKKMQEIIARD---------SPFLKQYLSHEKARELFESKKEAYKVEILES-IPAKEN 170
           Q++K   EI+ +            F +  ++ ++A +LF   K   K E++   +   E 
Sbjct: 149 QLDKAAAEIVKQAAAAPGDSPVRRFTRLEVTKQEALDLFSYSK--LKSELISDHVQDGEM 206

Query: 171 VTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQE 230
            ++Y+ G++ D CRGPH+   G ++ F K M  + AY++GD NR  + R+Y  A+ ++ +
Sbjct: 207 CSVYQCGDFVDFCRGPHIPDLGLIQAF-KCMYSSAAYFKGDQNRESMQRVYAVAFPSKDQ 265

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
           L +++  LEE+++RDHR LA+EMDLF   +   G   +   G +I++ L +++R  + + 
Sbjct: 266 LDKHIELLEEAKRRDHRNLAKEMDLFMTHKYAPGAPMFMNNGTRIYRKLEAFIRELLHEF 325

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
           DYEE+ TP  L+  LW  SGH   Y+ NMF ++  + T      + LKPMNCP H  ++ 
Sbjct: 326 DYEEVMTPTFLNTDLWGISGHLQHYKENMFLLERKEKTDP---QYGLKPMNCPCHCLLYK 382

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
           +   S +ELP+R+AEFG V+RNE SG+L GL RV  F QDDAH+FCT +Q+  E   +  
Sbjct: 383 NQHHSVQELPIRMAEFGVVHRNELSGALSGLTRVVRFEQDDAHIFCTVDQIEQEMTGLIE 442

Query: 410 LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL 469
            I  +Y  FG     + LS RPEK++GSD LWD AE  ++ VL      +   ++     
Sbjct: 443 FIKRVYTPFG-IDFALSLSLRPEKKMGSDELWDRAEGTLRKVL------TNTGLDFKENP 495

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPS--RFNAFYVNSHS-----EKCHPVM 522
           G+GAFYGPK +  L DA+GR  QCGTIQ+DFNLPS  RF+  Y          ++ HPVM
Sbjct: 496 GDGAFYGPKIDVHLTDALGRQHQCGTIQLDFNLPSKDRFDLLYSVYDEKTGSVKQEHPVM 555

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTT-ITSSAVEYAQEIANLLKSHHLS 581
           IHRA+ GS+ERF+ I+IEN  G  P W+SP Q +V        V YA+ +     S    
Sbjct: 556 IHRAILGSVERFMAILIENTGGRFPFWISPRQIVVIPLHGEDIVAYAKTVRERYHSKGYF 615

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRF------GSTTTQK---- 631
           ++ D  +E +  KI     KK   I++ G +E    S+ +         G    Q+    
Sbjct: 616 VDLDISSEKMEKKIAVAWNKKYNFIMVVGAQEKGTCSVALSGRTLSAYIGEKDNQRARKV 675

Query: 632 VSLLDAIPILTK 643
           ++L +   +L +
Sbjct: 676 LTLEETDALLAE 687


>gi|257440090|ref|ZP_05615845.1| threonine--tRNA ligase [Faecalibacterium prausnitzii A2-165]
 gi|257197442|gb|EEU95726.1| threonine--tRNA ligase [Faecalibacterium prausnitzii A2-165]
          Length = 611

 Score =  505 bits (1299), Expect = e-140,   Method: Composition-based stats.
 Identities = 210/583 (36%), Positives = 336/583 (57%), Gaps = 21/583 (3%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQIEKKMQE 128
           L VIRH+ AHIMA+A++ ++PE   A GP  E+GFYYD D  +   + D+LA IEK+M++
Sbjct: 34  LHVIRHTAAHIMAQAIKRLYPEADFAFGPATENGFYYDVDLGDTKLTDDDLANIEKEMRK 93

Query: 129 IIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           I   +       L  ++A +L E ++E YK+E +  +  +   + ++QGE+ D+C GPH+
Sbjct: 94  ICKENLAIKPFILPRDEAVKLMEERQEHYKIEHMADLADETEFSFFQQGEYVDMCIGPHL 153

Query: 189 RSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRK 248
             T  +K F K+ + +GAYW+ D    ML+RI G A++ Q+EL  +    +E+ +RDHRK
Sbjct: 154 TYTKALKAF-KITQQSGAYWKNDKENKMLTRINGVAFHNQEELEAWEKEQQEARERDHRK 212

Query: 249 LAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQ 306
           + +EM LF   +  G G+  +   G+ ++Q L +Y++ K +   Y  + TP +   +L++
Sbjct: 213 IGKEMGLFMTDDLVGRGLPMFLPAGYTVWQELENYIKEKERARGYLHVMTPCIGTVNLYK 272

Query: 307 QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFG 366
            SGHWD YR NMF          +  ++ L+PMNCP H+ ++ +   SYR+LP+R+ E  
Sbjct: 273 TSGHWDHYRENMFPAMEM-----EGESYVLRPMNCPHHMMIYANRPHSYRDLPMRIGEIA 327

Query: 367 SVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK 426
             +R E SG+L G+ R R F Q+DAH+FCT EQ+ +E   + NLI   YKDF        
Sbjct: 328 HDFRYESSGTLKGIERGRHFCQNDAHLFCTPEQIKSEVADVCNLIFETYKDFKITDYRCV 387

Query: 427 LSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           LS R      K    DA+W+ AEN ++ VL  +       I+    +GE AFYGPK +  
Sbjct: 388 LSLRDPADKKKYHDDDAMWNHAENALREVLTELG------IHFTEEIGEAAFYGPKLDVN 441

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +K A+G ++   T Q+DF LP++F+  YV+    +  PV++HRA+ GS++RF+  +IE  
Sbjct: 442 VKPAVGAEYTLSTCQLDFCLPAKFHLTYVDKDGSEKTPVVLHRAILGSLDRFMAYLIEET 501

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH-SIK 601
           KG  P WL+P+Q  V  ++   +EYA+ I   L    + +  D  N+ I YKIR    + 
Sbjct: 502 KGKFPTWLAPVQVKVLPVSEKTLEYAESITEKLVEAGVRVALDDDNQKIGYKIRAAQQVD 561

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           ++P +++ G KEA   ++ +R      T  + + + I  +T+E
Sbjct: 562 RVPYMLVLGAKEAEAGNLSVRDRKG-ETTTMEVDEFIAKVTEE 603


>gi|224531616|ref|ZP_03672248.1| threonyl-tRNA synthetase [Borrelia valaisiana VS116]
 gi|224511081|gb|EEF81487.1| threonyl-tRNA synthetase [Borrelia valaisiana VS116]
          Length = 581

 Score =  504 bits (1298), Expect = e-140,   Method: Composition-based stats.
 Identities = 244/582 (41%), Positives = 361/582 (62%), Gaps = 16/582 (2%)

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
                  L   RHS AH+MAEAV  ++P  ++AIGP I+DGFYYDF+ ++  + D L  I
Sbjct: 4   DLNKEDILYKKRHSIAHVMAEAVLDLFPNTKIAIGPPIKDGFYYDFEFKKQITEDSLLDI 63

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M+EI+   S F K+ +S E+A E+F+   E YK++++++   +  +++Y+   + DL
Sbjct: 64  ENRMREILKTGSSFEKEIISVEQAFEIFK--DEPYKIDLIKNFDLQNEISIYKSHNFVDL 121

Query: 183 CRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           CRGPHV +  ++  K FKL  +AGAYWRG+    ML+RIYGT WN ++EL  YL   EE 
Sbjct: 122 CRGPHVDNMNKIDPKAFKLTGIAGAYWRGNEKNTMLTRIYGTLWNNEKELRSYLNLREEI 181

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQV 299
           +KRDHRKL +E+DLF I E+ G G++F+H  G KI   +  + R +  K+ Y+ + TP V
Sbjct: 182 KKRDHRKLGKELDLFSIHEEVGPGLVFFHPNGAKIRSLIEDFWREEHSKNGYDILFTPHV 241

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               LWQ SGH D Y+ +MF     +    D   + LKPMNCP H+A++N G  SYR+LP
Sbjct: 242 GKSWLWQTSGHLDFYKDSMF-----EKIEMDKSDYYLKPMNCPFHIAIYNTGKHSYRDLP 296

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
            R AE G+VYR E  G+LHG+MR RGFTQDDAH+ CT  Q+ +E  ++    I ++  FG
Sbjct: 297 FRWAELGTVYRYEKIGALHGMMRARGFTQDDAHIICTHSQVVDEIKEVLRFAIYMWNKFG 356

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F  +   LST+P+K VG+DA W+ +  +++  L   +      +   +  G GAFYGPK 
Sbjct: 357 FNSLKAYLSTKPDKSVGNDADWEMSLKVLEETLSDFE------VPYEIDKGGGAFYGPKI 410

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +  + D++ R+WQ  TIQ DFNLP RFN  Y     ++  P MIHRA+ GSIERF GI++
Sbjct: 411 DLKIVDSLEREWQMSTIQFDFNLPERFNMTYTADDGKEKRPFMIHRALLGSIERFFGILV 470

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E++ G  PLWLSP+QA++  + ++  +YA ++ N  K+  + I+ D  +  +N KIRE+ 
Sbjct: 471 EHYGGAFPLWLSPVQAVIIPVNNTVEDYAIKVLNKFKNEGIRIKLDNSSSRMNAKIREYQ 530

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            KKIP + I G++E +E  I IR   +     + L +A+  +
Sbjct: 531 AKKIPYMFIIGEREVAEERISIRTRTNEQINGIELNEALKFI 572


>gi|219684484|ref|ZP_03539428.1| threonyl-tRNA synthetase [Borrelia garinii PBr]
 gi|219672473|gb|EED29526.1| threonyl-tRNA synthetase [Borrelia garinii PBr]
          Length = 593

 Score =  504 bits (1298), Expect = e-140,   Method: Composition-based stats.
 Identities = 244/578 (42%), Positives = 360/578 (62%), Gaps = 16/578 (2%)

Query: 67  PRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKM 126
              L   RHS AH+MAEAV  ++P  ++AIGP I+DGFYYDF+ ++  + D L  IE +M
Sbjct: 20  EDILYKKRHSIAHVMAEAVCDLFPNTKIAIGPPIKDGFYYDFEFKKQITEDSLLDIENRM 79

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGP 186
           +EI+   S F K+ +S E+A E+F+   E YK++++++   +  +++Y+   + DLCRGP
Sbjct: 80  REILKTGSSFEKEIISLEQALEIFK--DEPYKIDLIKNFDLQNEISIYKSHNFIDLCRGP 137

Query: 187 HVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           HV +  ++  K FKL  +AGAYWRG+    ML+RIYGT WN ++EL  YL   EE +KRD
Sbjct: 138 HVDNMNKIDPKAFKLTGIAGAYWRGNEKNTMLTRIYGTLWNNEKELRSYLNLREEIKKRD 197

Query: 246 HRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQH 303
           HRKL +E+DLF I E+ G G+IF+H  G KI   +  + R +  K+ Y+ + TP V    
Sbjct: 198 HRKLGKELDLFSIHEEIGPGLIFFHPNGAKIRALIEDFWREEHSKNGYDILFTPHVGKSW 257

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LWQ SGH D Y+ +MF     +    D   + LKPMNCP H+A++N G  SYR+LP R A
Sbjct: 258 LWQTSGHLDFYKDSMF-----EKIEMDKSDYYLKPMNCPFHIAIYNTGKHSYRDLPFRWA 312

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           E G+VYR E  G+LHG+MR RGFTQDDAH+ CT  Q+ +E  ++    I ++  FGF  +
Sbjct: 313 ELGTVYRYEKIGALHGMMRARGFTQDDAHIICTHSQVVDEIKEVLRFAIYMWSKFGFSSL 372

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
              LST+P+K VG+D  W+ +  +++  L   +      +   +  G GAFYGPK +  +
Sbjct: 373 KAYLSTKPDKSVGNDYDWEMSLKVLEEALSNFE------VPYEIDKGGGAFYGPKIDLKI 426

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D++ R+WQ  TIQ DFNLP RFN  Y     ++  P MIHRA+ GSIERF GI++E++ 
Sbjct: 427 VDSLEREWQMSTIQFDFNLPERFNMTYTAEDGKEKRPFMIHRALLGSIERFFGILVEHYG 486

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  PLWLSP+QA++  + ++  +Y  ++ N  K+  + I+ D  +  +N KIRE+  KKI
Sbjct: 487 GAFPLWLSPVQAVIIPVNNTVEDYTIKVLNKFKNAGIRIKLDNSSSRMNAKIREYQAKKI 546

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           P + I G++EA E  I IR   +     + L +A+ ++
Sbjct: 547 PYMFIIGEREAIEEKISIRTRTNEQINGIELDEALKLI 584


>gi|156120825|ref|NP_001095559.1| probable threonyl-tRNA synthetase 2, cytoplasmic [Bos taurus]
 gi|189083595|sp|A6QNM8|SYTC2_BOVIN RecName: Full=Probable threonyl-tRNA synthetase 2, cytoplasmic;
           AltName: Full=Threonine--tRNA ligase; Short=ThrRS;
           AltName: Full=Threonyl-tRNA synthetase-like protein 2
 gi|151556799|gb|AAI48907.1| TARSL2 protein [Bos taurus]
 gi|296475416|gb|DAA17531.1| threonyl-tRNA synthetase-like 2 [Bos taurus]
          Length = 724

 Score =  504 bits (1297), Expect = e-140,   Method: Composition-based stats.
 Identities = 221/574 (38%), Positives = 323/574 (56%), Gaps = 22/574 (3%)

Query: 2   PSDIKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
            + I +   DG ++K      T   VA  IS+ LA+  V   +NG++ DL  P+  + ++
Sbjct: 157 SNVITVRVADGRTVKGEAWKTTPYQVAAEISQELAETTVVAKVNGELWDLDRPLEGDATV 216

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDE 118
           E++T ED  + AV  HS AH++ EA++  +  + +   P  +  F+YD   E +  SS E
Sbjct: 217 ELLTFEDEEARAVYWHSSAHVLGEALELHYGGL-LCCSPPGDGSFHYDVYLEDRAVSSAE 275

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L  +E   Q II    PF +  +S +   +LF+     +K  IL+   A    T+YR G 
Sbjct: 276 LPVLESMCQAIIKEQQPFERLEVSTKVLLDLFKY--NKFKCRILKEKVATPTTTVYRCGP 333

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             +LC+GPHVR TG +K   K+ K + AYW  +    ML R+YG ++  +Q +  +    
Sbjct: 334 LVELCKGPHVRHTGTIK-VIKIFKNSLAYWADNPEMEMLQRVYGVSFPDEQRMAAWEELQ 392

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
           EE+  RDHR + +E +LF   +   G  F+  +G  I+ TLI ++R +    ++ E+ +P
Sbjct: 393 EEARARDHRTIGKEQELFFFHDLSPGSCFFLPRGACIYNTLIDFIREQHHQRNFTEVLSP 452

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW+ SGHW  Y  NMF      DT      FALKPMNCPGH  +F H  +S+RE
Sbjct: 453 NMYSCKLWEASGHWQHYSENMFTFDIDKDT------FALKPMNCPGHCLMFAHRPRSWRE 506

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           +P+RLA+FG ++RNEPSG+L GL  VR F QDDAH+FCT  Q+  E       + S+Y  
Sbjct: 507 MPIRLADFGVLHRNEPSGALSGLTCVRRFQQDDAHIFCTVGQLEEEIKGCLQFLQSVYST 566

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF   +  LSTRPE  +G   LWD+AE  ++  L       +      +  GEGAFYGP
Sbjct: 567 FGFSFQLN-LSTRPENFLGKIELWDEAEKQLQNSLMEFGKPWK------INPGEGAFYGP 619

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIG 536
           K +  +KDA+GR  QC TIQ+DF LP RFN  YV+    +K +PV+IH+A+ GS+ER I 
Sbjct: 620 KIDLEIKDALGRYHQCATIQLDFQLPIRFNLTYVSKDGDDKKNPVIIHQAILGSVERMIA 679

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQE 570
           I+ EN+ G  P WLSP Q +V  +  +  +YA +
Sbjct: 680 ILSENYGGKWPFWLSPRQVMVIPVGPTCEKYALQ 713


>gi|295101322|emb|CBK98867.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Faecalibacterium
           prausnitzii L2-6]
          Length = 594

 Score =  503 bits (1296), Expect = e-140,   Method: Composition-based stats.
 Identities = 208/583 (35%), Positives = 332/583 (56%), Gaps = 21/583 (3%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQIEKKMQE 128
           L VIRH+ AH+MA+A++ ++PE   A GP  E+GFYYD D  +   + ++LA IEK+M +
Sbjct: 19  LHVIRHTAAHVMAQAIKRLYPEADFAFGPATENGFYYDVDLGDTKLTDEDLANIEKEMHK 78

Query: 129 IIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           I   +       L   +A +L E + E YKVE +  +  +   + ++QGE+ D+C GPH+
Sbjct: 79  ITKENLAIKPFILPRAEAVKLMEERHENYKVEHMADLADETEFSFFQQGEYVDMCIGPHL 138

Query: 189 RSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRK 248
             T  +K F K+ + +GAYW+ D    ML+RI G A++ Q+EL  +    +E+ +RDHRK
Sbjct: 139 TYTKALKAF-KITQQSGAYWKNDKENRMLTRINGVAFHNQEELDAWEKEQQEARERDHRK 197

Query: 249 LAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQ 306
           + +EM LF   +  G G+  +   G+ ++Q L +Y++ K +   Y  + TP +   +L++
Sbjct: 198 IGKEMGLFMTDDLVGRGLPMFLPAGYTVWQELENYIKEKERARGYLHVMTPCIGTVNLYK 257

Query: 307 QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFG 366
            SGHWD YR NMF          +  ++ L+PMNCP H+ ++ +   SYR+LP+R+ E  
Sbjct: 258 TSGHWDHYRENMFPAMEM-----EGESYVLRPMNCPHHMMIYANRPHSYRDLPMRIGEIA 312

Query: 367 SVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK 426
             +R E SG+L G+ R R F Q+DAH+FCT EQ+ +E   + NLI   YKDF        
Sbjct: 313 HDFRYESSGTLKGIERGRHFCQNDAHLFCTPEQIKSEVADVCNLIFETYKDFNITDYRCV 372

Query: 427 LSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           LS R      K    DA+W+ AEN ++ VL  +       I+    +GE AFYGPK +  
Sbjct: 373 LSLRDPADKKKYHDDDAMWNHAENALREVLTELG------IHFTEEIGEAAFYGPKLDVN 426

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           +K A+G ++   T Q+DF LP++F+  YV+    +  PV++HRA+ GS++RF+  +IE  
Sbjct: 427 VKPAVGAEYTLSTCQLDFCLPAKFHLTYVDKDGTEKTPVVLHRAILGSLDRFMAYLIEET 486

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH-SIK 601
           KG  P WL+P+Q  V  ++   +EY++ I   L    + +  D  N+ I YKIR    + 
Sbjct: 487 KGKFPTWLAPVQVKVLPVSEKTLEYSEAITEKLVEAGVRVALDDDNQKIGYKIRAAQQVD 546

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           ++P +++ G KEA   ++ +R      T  + + + I  +T E
Sbjct: 547 RVPYMLVLGAKEAEAGNVSVRDRKG-ETTTMEVDEFIAKVTSE 588


>gi|203288149|ref|YP_002223164.1| threonyl-tRNA synthetase [Borrelia recurrentis A1]
 gi|238690577|sp|B5RQ59|SYT_BORRA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|201085369|gb|ACH94943.1| threonyl-tRNA synthetase [Borrelia recurrentis A1]
          Length = 583

 Score =  503 bits (1296), Expect = e-140,   Method: Composition-based stats.
 Identities = 241/573 (42%), Positives = 357/573 (62%), Gaps = 17/573 (2%)

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           RHS AH+MAEAV  ++P  ++AIGP I+DGFYYDFD E+  S D+L  IE KM+EI+   
Sbjct: 15  RHSIAHVMAEAVLELFPNTKIAIGPPIKDGFYYDFDFEKHISEDDLLLIEHKMREILKTG 74

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQ 193
           SPF+++ ++ E+A  LF+   E YK++++++    + +T+Y+  ++ DLCRGPHV +  +
Sbjct: 75  SPFIREVITREQALVLFK--DEPYKIDLIQNFDVTDEITIYKSHKFTDLCRGPHVDNMNK 132

Query: 194 V-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLARE 252
           +  K FKL  +AGAYWRG+    MLSRIYGT WN +++L  YL   EE +KRDHRKL RE
Sbjct: 133 LDPKAFKLTSIAGAYWRGNERNKMLSRIYGTLWNNEKDLKAYLKLQEEIKKRDHRKLGRE 192

Query: 253 MDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGH 310
           ++LF + ++ G G+IF+H  G +I   + ++ R +  K+ Y+ + TP +    LW+ SGH
Sbjct: 193 LNLFSVHDEIGPGLIFFHPHGARIRALIENFWREEHFKNGYDILFTPHIGKSWLWETSGH 252

Query: 311 WDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYR 370
            D Y+ +MF     +    D   + +KPMNCP H+A++N    SYR+LP R AE G+VYR
Sbjct: 253 LDFYKESMF-----EKIEMDRSDYYVKPMNCPFHIAIYNTDKHSYRDLPFRWAELGTVYR 307

Query: 371 NEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR 430
            E  G++HG MRVRGFTQDDAH+ CT EQ+  E  ++    I ++  FGF  +   LST+
Sbjct: 308 YEKIGAIHGTMRVRGFTQDDAHIICTYEQVNFEVREVLRFAIDMWNKFGFTNLKAYLSTK 367

Query: 431 PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRD 490
           PEK VG D  W  A  +++  L          I+  +  G GAFYGPK +  + D++GR 
Sbjct: 368 PEKAVGDDDDWQMAVKVLEKALIDFN------IDFDIDEGGGAFYGPKIDLKIIDSLGRA 421

Query: 491 WQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL 550
           WQ  TIQ DFNLP RF   Y     ++  P MIHRA+ GSIERF GI++E++ G  P+WL
Sbjct: 422 WQMTTIQFDFNLPVRFKMTYTAEDGKEKRPFMIHRALLGSIERFFGILVEHYGGAFPVWL 481

Query: 551 SPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FRNETINYKIREHSIKKIPIIIIC 609
           +P+Q ++  + S   EYA E+ +  ++  + I+ D + N  +N KIR++  KK+P + I 
Sbjct: 482 APLQVVIIPVNSIVEEYALEVLSRFQNEGIRIKFDNYYNMRMNAKIRQYQSKKVPYMFII 541

Query: 610 GDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           G++E  E  I IR   +     + L +A+  + 
Sbjct: 542 GEREVVEGKISIRTRTNEQINGLELKEALEFVK 574


>gi|154278048|ref|XP_001539849.1| threonyl-tRNA synthetase [Ajellomyces capsulatus NAm1]
 gi|150413434|gb|EDN08817.1| threonyl-tRNA synthetase [Ajellomyces capsulatus NAm1]
          Length = 733

 Score =  503 bits (1295), Expect = e-140,   Method: Composition-based stats.
 Identities = 215/694 (30%), Positives = 347/694 (50%), Gaps = 88/694 (12%)

Query: 4   DIKLTFPDG-----SIKNFPVHATGSDVAESISRSLAKKAVAVAING-KVCDLSDPVR-E 56
           DI +T   G     +I       T       I + ++   V   ++G ++ DL  P+  +
Sbjct: 61  DINITIDIGDSNPSTIIGKAWETTPGSFLRDIPKEISSTVVIAKLDGKELWDLDRPLERD 120

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE--QPF 114
             +  +  +      V  HS AH++ EA +  +    ++ GP    GF+YD   E     
Sbjct: 121 CRVTFLPFDSIEGREVFWHSSAHVLGEACECYY-GCLLSHGPPTPQGFFYDMALEPGHVV 179

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
              +   ++ K   I     PF +  +S    +++F   K  YK+  + ++   E+ T+Y
Sbjct: 180 KESDWPALDTKAARIFKEKQPFDRLEVSKSDLKKMFAYSK--YKLHYINNLVEGESSTVY 237

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
           R G   DLCRGPH+++TG++K   K+M+ + AY+ GD +   L RI G A+  ++++ ++
Sbjct: 238 RCGTLVDLCRGPHIQNTGKIKI-MKIMQNSAAYFLGDQSNDALQRIRGVAFPDKKQMQEH 296

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEE 293
           L FLEE+EKR+H ++ ++ DLF   E   G  F    G KIF  L + +R + +   Y+E
Sbjct: 297 LKFLEEAEKRNHLRIGKDQDLFFFDEVSPGCPFLLPNGTKIFNALQALLRSEYRKRGYQE 356

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           + +P + D  +W+QSGHW  Y+ +MF +        + RT+ALKPMNCPGH  +F H  +
Sbjct: 357 VQSPNMYDVGIWRQSGHWQHYKDDMFKL------DIEKRTWALKPMNCPGHAIMFGHRER 410

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYRELP+R+A+FG ++RNE SG+LHGL R+                   E   + + + +
Sbjct: 411 SYRELPLRIADFGVLHRNEASGALHGLTRI-----------------MQEIDGLFDFLRA 453

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           IY  FGF    +KLSTRPEK +G    W+ AE+ ++  +   K +     +  V  G+GA
Sbjct: 454 IYGLFGF-SFKLKLSTRPEKYMGKLETWNYAEDQLRAAMTKFKGN-----DWEVDEGDGA 507

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS------------------ 515
           FYGPK +  ++DA+ R++QC TIQ+D+ +P  F   Y+   +                  
Sbjct: 508 FYGPKIDVTIQDALKREFQCATIQLDYQMPVNFKLEYMTGETGAKAKPEEKSAGAPAAKT 567

Query: 516 -----------------------EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
                                   +  PV+IHRA+ GS ERF GI+IE+F G  P WLSP
Sbjct: 568 ADRPAGDAAKPDVPPTNSDEPGPGRARPVVIHRAIIGSFERFFGIIIEHFGGKWPFWLSP 627

Query: 553 IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
            Q ++  +  +  +Y +E+  +LK   L+++ D    T+  KIR   I +   I + G +
Sbjct: 628 RQILIVPVMPAVNDYVEELQRILKGDKLNVDIDISGNTMQKKIRTGQIAQYNFIFVVGAQ 687

Query: 613 EASERSIGIRRFGSTTTQK----VSLLDAIPILT 642
           E S R++ IR     ++Q     V L +A   L 
Sbjct: 688 EKSTRTVNIRNRDDPSSQAKGSLVPLEEARAKLR 721


>gi|219685509|ref|ZP_03540326.1| threonine--tRNA ligase [Borrelia garinii Far04]
 gi|219672908|gb|EED29930.1| threonine--tRNA ligase [Borrelia garinii Far04]
          Length = 581

 Score =  503 bits (1294), Expect = e-140,   Method: Composition-based stats.
 Identities = 243/578 (42%), Positives = 360/578 (62%), Gaps = 16/578 (2%)

Query: 67  PRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKM 126
              L   RHS AH+MAEAV  ++P  ++AIGP I+DGFYYDF+ ++  + D L  IE +M
Sbjct: 8   EDILYKKRHSIAHVMAEAVCDLFPNTKIAIGPPIKDGFYYDFEFKKQITEDSLLDIENRM 67

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGP 186
           +EI+   S F K+ +S E+A E+F+   E YK++++++   +  +++Y+   + DLCRGP
Sbjct: 68  REILKTGSSFEKEIISLEQALEIFK--DEPYKIDLIKNFDLQNEISIYKSHNFIDLCRGP 125

Query: 187 HVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           HV +  ++  K FKL  +AGAYWRG+    ML+RIYGT WN ++EL  YL   EE +KR+
Sbjct: 126 HVDNMNKIDPKAFKLTGIAGAYWRGNEKNTMLTRIYGTLWNNEKELRSYLNLREEIKKRN 185

Query: 246 HRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQH 303
           HRKL +E+DLF I E+ G G+IF+H  G KI   +  + R +  K+ Y+ + TP V    
Sbjct: 186 HRKLGKELDLFSIHEEIGPGLIFFHPNGAKIRALIEDFWREEHSKNGYDILFTPHVGKSW 245

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LWQ SGH D Y+ +MF     +    D   + LKPMNCP H+A++N G  SYR+LP R A
Sbjct: 246 LWQTSGHLDFYKDSMF-----EKIEMDKSDYYLKPMNCPFHIAIYNTGKHSYRDLPFRWA 300

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           E G+VYR E  G+LHG+MR RGFTQDDAH+ CT  Q+ +E  ++    I ++  FGF  +
Sbjct: 301 ELGTVYRYEKIGALHGMMRARGFTQDDAHIICTHSQVVDEIKEVLRFAIYMWSKFGFSSL 360

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
              LST+P+K VG+D  W+ +  +++  L   +      +   +  G GAFYGPK +  +
Sbjct: 361 KAYLSTKPDKSVGNDYDWEMSLKVLEEALSNFE------VPYEIDKGGGAFYGPKIDLKI 414

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D++ R+WQ  TIQ DFNLP RFN  Y     ++  P MIHRA+ GSIERF GI++E++ 
Sbjct: 415 VDSLEREWQMSTIQFDFNLPERFNMTYTAEDGKEKRPFMIHRALLGSIERFFGILVEHYG 474

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  PLWLSP+QA++  + ++  +Y  ++ N  K+  + I+ D  +  +N KIRE+  KKI
Sbjct: 475 GAFPLWLSPVQAVIIPVNNTVEDYTIKVLNKFKNAGIRIKLDNSSSRMNAKIREYQAKKI 534

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           P + I G++EA E  I IR   +     + L +A+ ++
Sbjct: 535 PYMFIIGEREAIEEKISIRTRTNEQISGIELDEALKLI 572


>gi|219849385|ref|YP_002463818.1| threonyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
 gi|219543644|gb|ACL25382.1| threonyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
          Length = 594

 Score =  503 bits (1294), Expect = e-140,   Method: Composition-based stats.
 Identities = 226/601 (37%), Positives = 352/601 (58%), Gaps = 30/601 (4%)

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            + P+       +RHS AH+MA+AV  I+P+ ++AIGP IE+GFYYDFD  +P + ++L 
Sbjct: 2   PVDPKSDPYYR-LRHSLAHVMAQAVLEIFPDAKIAIGPPIENGFYYDFDLPRPLTPEDLT 60

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIP-----------AKE 169
           +IEK+M+ IIA + PF+ + ++ E+AR++     + YK+E++E +               
Sbjct: 61  EIEKRMKRIIAGNHPFIYREVTAEEARQI--FANQPYKLELIEGLAKGLDEYGETHHGDT 118

Query: 170 NVTLYRQGEWFDLCRGPHVRSTGQVKK-FFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQ 228
            ++ YRQ  + DLCRGPH+  TG++    FKLM +AGAYWRGD     L RIYGT WNT+
Sbjct: 119 VISTYRQDTFEDLCRGPHLNHTGEINPEAFKLMSIAGAYWRGDEKNRQLQRIYGTGWNTK 178

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-K 286
           +EL  YL+ LEES +RDHR+L +E+ LF  ++D G G+  +  KG  I   +  ++R  +
Sbjct: 179 EELEAYLHRLEESRRRDHRRLGKELGLFFFSDDIGPGLPIFSPKGEIIRHEMEKFVREVQ 238

Query: 287 IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA 346
            +  Y+ + T  V+ + L+++SGH+D+YR +MF      + +     F LKPMNCP H+ 
Sbjct: 239 TRYGYQHVWTGNVVKEQLYRKSGHYDNYRDSMFPPMVESEDLI----FRLKPMNCPSHMT 294

Query: 347 VFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           ++N  G+ SYR+LP+R AEF ++YR E SG+L GL RVR  TQDD H+FC  +Q+  E  
Sbjct: 295 LYNQLGVISYRDLPLRFAEFATLYRYEDSGALSGLTRVRALTQDDCHIFCRPDQIQEEFS 354

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEK--RVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
               +I  +   + F    V+LS R ++   V  D  W+ A                + +
Sbjct: 355 LALQVIREVLGTYKFTDYKVRLSLRGKEGKYVQDDEKWELATAA------LRAALEANGV 408

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
                 GE AFYGPK +++ +D +GR+WQ  TIQVDF  P+R    Y+    +   PV++
Sbjct: 409 EYFEAEGEAAFYGPKADFLARDVLGREWQLSTIQVDFIQPARLGCEYIGEDDKPHTPVVL 468

Query: 524 HRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIE 583
           HRAV G+ ERF+GI+IE++ G  PLWL+P+QA++  IT   +EYA+++   L +  L +E
Sbjct: 469 HRAVTGTTERFMGILIEHYAGAFPLWLAPVQAVIIPITDKQMEYARKVRQRLFAAGLRVE 528

Query: 584 TDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            D   + +  KIR   ++KIP ++I G +E S  ++ +R         + +   +    +
Sbjct: 529 LDENRDRMQGKIRRAQLQKIPYMLIIGAREESADAVAVRTRAGDDLGAMPVEAFLARALE 588

Query: 644 E 644
           E
Sbjct: 589 E 589


>gi|194210848|ref|XP_001916146.1| PREDICTED: similar to threonyl-tRNA synthetase 2, mitochondrial
           [Equus caballus]
          Length = 667

 Score =  502 bits (1291), Expect = e-139,   Method: Composition-based stats.
 Identities = 206/667 (30%), Positives = 322/667 (48%), Gaps = 80/667 (11%)

Query: 5   IKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           IK+  P G  +     + T   +A+ IS +LA  AVA  +NG+  DL  P+  +  +  +
Sbjct: 60  IKIALPGGHKVDAVAWNTTPYQLAQQISSTLADTAVAAEVNGEPYDLERPLEKDSDLRFL 119

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD--KEQPFSSDELA 120
           T +     AV  HS  H++  A + +     +  GP  E GFY+DF   KE+     +L 
Sbjct: 120 TFDSAEGKAVFWHSSTHVLGSAAEQLL-GAVLCRGPSTECGFYHDFFLGKERTVRGSDLP 178

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            +E+  +++ A   PF +   S ++ R+LF+     +K+ ++E        T+Y  G   
Sbjct: 179 LLEQFCRKLAAAAQPFRRLEASQDQLRQLFK--DNPFKLRLIEEKVTGPKATVYGCGMLV 236

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLC+GPH+R TGQ+     L +    ++   S         GT                 
Sbjct: 237 DLCQGPHLRHTGQIGALKLLTEQELFFFHELSPGSCFFLPRGT----------------- 279

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQV 299
                                            +++  L++++R +  +  + E+ TP +
Sbjct: 280 ---------------------------------RVYNALVAFIRAEYSRRGFSEVKTPTL 306

Query: 300 LDQHLWQQSGHWDSYRANMFAV-----------KCADDTIKDLRTFALKPMNCPGHVAVF 348
               LW+ SGHW+ Y+ +MFA+           +    T     T ALKPMNCP H  +F
Sbjct: 307 FSTKLWELSGHWEHYQEDMFALQPPGSDRPTGSQSDHSTSHPTDTLALKPMNCPAHCLMF 366

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
            H  +S+RELP+RLA+FG ++R E SGSL GL R+R F QDDAH+FC  +Q+  E     
Sbjct: 367 AHRPRSWRELPLRLADFG-LHRAEVSGSLGGLTRLRRFQQDDAHIFCAPDQLEAEIRGCL 425

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
           + + SIY   GF   +  LSTRP   +G   LWD AE +++  L+             + 
Sbjct: 426 DFLRSIYAVLGFSFRLA-LSTRPSGFLGEPCLWDQAEQVLQQALEEFGEPWD------LN 478

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
            G+GAFYGPK +  L DA+GR  QCGTIQ+DF LP RF+  Y        HPV+IHRAV 
Sbjct: 479 PGDGAFYGPKIDVHLHDALGRSHQCGTIQLDFQLPLRFDLQYKGQAGALEHPVLIHRAVL 538

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FR 587
           GS+ER +G++ E+  G  PLWLSP Q +V  + +    YA+E    L++  L  + D   
Sbjct: 539 GSVERMLGMLAESCGGKWPLWLSPFQVVVIPVGTEQEGYAREAQRSLQAAGLVCDLDADS 598

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK--ES 645
             T++ ++R   +       + G KE S+R++ IR   +    +  L +A+  L +   +
Sbjct: 599 GLTLSRRVRRAQLAHYNFQFVVGQKEQSKRTVNIRTRDNRRLGEWDLTEAVQRLLELQNT 658

Query: 646 LPPDCQK 652
             P+ ++
Sbjct: 659 RVPNAEE 665


>gi|240280652|gb|EER44156.1| threonyl-tRNA synthetase [Ajellomyces capsulatus H143]
 gi|325089093|gb|EGC42403.1| threonyl-tRNA synthetase [Ajellomyces capsulatus H88]
          Length = 733

 Score =  502 bits (1291), Expect = e-139,   Method: Composition-based stats.
 Identities = 214/693 (30%), Positives = 346/693 (49%), Gaps = 88/693 (12%)

Query: 5   IKLTFPDG-----SIKNFPVHATGSDVAESISRSLAKKAVAVAING-KVCDLSDPVR-EG 57
           I +T   G     +I       T       I + ++   V   ++G ++ DL  P+  + 
Sbjct: 62  INITIDIGDSNPSTIIGKAWETTPGSFLRDIPKEISSTVVIAKLDGKELWDLDRPLERDC 121

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE--QPFS 115
            +  +  +      V  HS AH++ EA +  +    ++ GP    GF+YD   E      
Sbjct: 122 RVTFLPFDSIEGREVFWHSSAHVLGEACECYY-GCLLSHGPPTPQGFFYDMALEPGHVVK 180

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
             +   ++ K   I     PF +  +S    +++F   K  YK+  + ++   E+ T+YR
Sbjct: 181 ESDWPALDTKAARIFKEKQPFDRLEVSKSDLKKMFAYSK--YKLHYINNLVEGESSTVYR 238

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
            G   DLCRGPH+++TG++K   K+M+ + AY+ GD +   L RI G A+  ++++ ++L
Sbjct: 239 CGTLVDLCRGPHIQNTGKIKI-MKIMQNSAAYFLGDQSNDALQRIRGVAFPDKKQMQEHL 297

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEI 294
            FLEE+EKR+H ++ ++ DLF   E   G  F    G KIF  L + +R + +   Y+E+
Sbjct: 298 KFLEEAEKRNHLRIGKDQDLFFFDEVSPGCPFLLPNGTKIFNALQALLRSEYRKRGYQEV 357

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
            +P + D  +W+QSGHW  Y+ +MF +        + RT+ALKPMNCPGH  +F H  +S
Sbjct: 358 QSPNMYDVGIWRQSGHWQHYKDDMFKL------DIEKRTWALKPMNCPGHAIMFGHRERS 411

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YRELP+R+A+FG ++RNE SG+LHGL R+                   E   + + + +I
Sbjct: 412 YRELPLRIADFGVLHRNEASGALHGLTRI-----------------MQEIDGLFDFLRAI 454

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           Y  FGF    +KLSTRPEK +G    W+ AE+ ++  +   K +     +  V  G+GAF
Sbjct: 455 YGLFGF-SFKLKLSTRPEKYMGKLETWNYAEDQLRAAMTKFKGN-----DWEVDEGDGAF 508

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS------------------- 515
           YGPK +  ++DA+ R++QC TIQ+D+ +P  F   Y+   +                   
Sbjct: 509 YGPKIDVTIQDALKREFQCATIQLDYQMPVNFKLEYMTGETGAKAKPEEKSAGAPAAKTA 568

Query: 516 ----------------------EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI 553
                                  +  PV+IHRA+ GS ERF GI+IE+F G  P WLSP 
Sbjct: 569 DKPAGDAAKPDVPPTNSDEPGPGRARPVVIHRAIIGSFERFFGIIIEHFGGKWPFWLSPR 628

Query: 554 QAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
           Q ++  +  +  +Y +E+  +LK   L+++ D    T+  KIR   I +   I + G +E
Sbjct: 629 QILIVPVMPAVNDYVEELQRILKGDKLNVDIDISGNTMQKKIRTGQIAQYNFIFVVGAQE 688

Query: 614 ASERSIGIRRFGSTTTQK----VSLLDAIPILT 642
            S R++ IR     ++Q     V L +A   L 
Sbjct: 689 KSTRTVNIRNRDDPSSQAKGSLVPLEEARAKLR 721


>gi|308160139|gb|EFO62643.1| Threonyl-tRNA synthetase [Giardia lamblia P15]
          Length = 695

 Score =  501 bits (1289), Expect = e-139,   Method: Composition-based stats.
 Identities = 233/672 (34%), Positives = 366/672 (54%), Gaps = 48/672 (7%)

Query: 6   KLTFPDGSIKNFPVHATGSDVAESI--SRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            +TFPDG     P   T  DVA+ +  ++ +  K +A   + ++ D+S  + +   +E +
Sbjct: 30  TVTFPDGKTTEIPAAFTALDVAKQVVKNKKVYSKFLAAVRDDEIIDMSARLGKTCKLEFL 89

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQP--FSSDELA 120
           T +DPR+  V  HS AH++  A++  + +  +  GP I+ GF+YD   E       + L 
Sbjct: 90  TFDDPRAREVFWHSSAHLLGYALEKTF-QAHLGHGPAIDSGFFYDAFFENSLKMEPESLI 148

Query: 121 QIEKKMQEIIARD---------SPFLKQYLSHEKARELFESKKEAYKVEILES-IPAKEN 170
           Q++K   EI+ +            F +  ++ ++A +LF   K   K E++   +   E 
Sbjct: 149 QLDKAAAEIVKQAAAAPSDSPVRRFTRLEVTKQEALDLFSYSK--LKSELISDHVQDGEM 206

Query: 171 VTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQE 230
            ++Y+ G++ D CRGPH+   G ++ F K M  + AY++GD NR  + R+Y  A+ ++ +
Sbjct: 207 CSVYQCGDFVDFCRGPHIPDLGLIQAF-KCMYSSAAYFKGDQNRESMQRVYAVAFPSKDQ 265

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
           L +++  LEE+++RDHR LA+EMDLF   +   G   +   G +I++ L +++R  + + 
Sbjct: 266 LDKHIELLEEAKRRDHRNLAKEMDLFMTHKYAPGAPMFMNNGTRIYRKLEAFIRELLHEF 325

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
           DYEE+ TP  L+  LW  SGH   Y+ NMF ++  + T      + LKPMNCP H  ++ 
Sbjct: 326 DYEEVMTPTFLNTDLWGISGHLQHYKENMFLLERKEKTDP---QYGLKPMNCPCHCLLYK 382

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
           +   S +ELP+R+AEFG V+RNE SG+L GL RV  F QDDAH+FCT +Q+  E   +  
Sbjct: 383 NQHHSVQELPIRMAEFGVVHRNELSGALSGLTRVVRFEQDDAHIFCTVDQIEQEMTGLIE 442

Query: 410 LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL 469
            I  +Y  FG     + LS RPEK++GSD LWD AE  ++ VL      +   ++     
Sbjct: 443 FIKRVYTPFG-IDFALSLSLRPEKKMGSDELWDRAEGTLRKVL------TNTGLDFKENP 495

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPS--RFNAFYVNSHS-----EKCHPVM 522
           G+GAFYGPK +  L DA+GR  QCGTIQ+DFNLPS  RF+  Y          ++ HPVM
Sbjct: 496 GDGAFYGPKIDVHLTDALGRQHQCGTIQLDFNLPSKDRFDLLYSVYDEKTGSVKQEHPVM 555

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTT-ITSSAVEYAQEIANLLKSHHLS 581
           IHRA+ GS+ERF+ I+IEN  G  P W+SP Q +V        + YA+ +     S    
Sbjct: 556 IHRAILGSVERFMAILIENTGGRFPFWISPRQIMVIPLHGGDIIAYAKTVRERYHSKGYF 615

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRF------GSTTTQK---- 631
           ++ D  +E +  KI     KK   I++ G +E    S+ +         G    Q+    
Sbjct: 616 VDLDVSSEKMEKKIAVAWNKKYNFIMVVGAQEKGTCSVALSGRTLSAYIGEKDNQRARKV 675

Query: 632 VSLLDAIPILTK 643
           ++L +   +LT+
Sbjct: 676 LTLEETDTLLTE 687


>gi|260888481|ref|ZP_05899744.1| threonine--tRNA ligase [Selenomonas sputigena ATCC 35185]
 gi|330838210|ref|YP_004412790.1| threonyl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
 gi|260861678|gb|EEX76178.1| threonine--tRNA ligase [Selenomonas sputigena ATCC 35185]
 gi|329745974|gb|AEB99330.1| threonyl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
          Length = 593

 Score =  500 bits (1287), Expect = e-139,   Method: Composition-based stats.
 Identities = 228/582 (39%), Positives = 350/582 (60%), Gaps = 12/582 (2%)

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWP-EVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
            +  + L V RHS AH++A+AV  ++  E Q AIGP I DGFYYDF   +  ++D+L  I
Sbjct: 1   MDKEQFLHVYRHSLAHVLAKAVIEVFGKETQYAIGPEIADGFYYDFLLPRAATNDDLKTI 60

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE-WFD 181
           E+KM+EI+ R   + ++ +S + A ELF+   + +KVE++E +P  E +T YR G+ + D
Sbjct: 61  EEKMKEILKRKEDWKREEISKKDALELFK--NQKFKVELIEDLPDDEILTTYRTGDDFVD 118

Query: 182 LCRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           LCRGPHV ++  +    ++L  ++G+YWRGD  R  L+RIY  A+ T++EL  +L F+++
Sbjct: 119 LCRGPHVENSAALLSVAWQLRSMSGSYWRGDEKRDQLTRIYAYAFPTKEELKAHLAFIKD 178

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           +++RDH+K+  ++DLF   E   G+ +W  +GWK+F  L+ + R       Y+E++ P +
Sbjct: 179 AQERDHKKIGPQLDLFMFDETAPGMPYWLPRGWKLFNALLEFWRGIHEAHGYQEVSAPVI 238

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            ++ LW  SGHW  Y+ NMF +  AD  I+   TFA+KPMNCP  + ++    +SYR+LP
Sbjct: 239 NNKRLWVTSGHWAHYKENMFLIPGADGDIEADDTFAIKPMNCPNAIKIYQRKTRSYRDLP 298

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R      ++R E SG L+GL RV+ F QDD H F  ++Q+  E   I ++   IY   G
Sbjct: 299 IRYNTVDVIHRKEKSGELNGLFRVQLFRQDDDHTFLMEDQIAAEMGDIMDIADEIYSTLG 358

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
                 +LSTRP+  +G    W+ AE  +K +LD          N  V  G+GAFYGPK 
Sbjct: 359 -MSCKAELSTRPDDFMGDIETWNVAEKELKAILDRKYGEG----NYEVNEGDGAFYGPKI 413

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +  +KDA+GR+WQ GT+Q+DF LP  F+  Y+        PV++HRA+FGS+ERFIG++I
Sbjct: 414 DLKMKDALGREWQVGTLQLDFQLPQNFDLKYIAKDGSHKQPVVLHRAIFGSMERFIGVLI 473

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           ENFKG  P WLSP+Q  +  I     +YA+++A  L    +  E D+ ++ +  KI+   
Sbjct: 474 ENFKGAFPFWLSPVQVGIVPIRPEHNDYAKKVAQKLFKSRVRFEVDYADKNMREKIKGFK 533

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTT-QKVSLLDAIPI 640
             K P I++ GDKEA E ++ I   G+    + V L   I +
Sbjct: 534 HYKDPYILVLGDKEAEENTVSINVRGTNEQLKDVPLDTFIEM 575


>gi|269966330|ref|ZP_06180417.1| threonyl-tRNA synthetase [Vibrio alginolyticus 40B]
 gi|269829069|gb|EEZ83316.1| threonyl-tRNA synthetase [Vibrio alginolyticus 40B]
          Length = 485

 Score =  500 bits (1286), Expect = e-139,   Method: Composition-based stats.
 Identities = 230/483 (47%), Positives = 319/483 (66%), Gaps = 14/483 (2%)

Query: 163 ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYG 222
           E++       LY   E+ D+CRGPHV +    + F  L  VAGAYWRG+S+  ML RIYG
Sbjct: 6   ENVSRDNRPGLYHHEEYIDMCRGPHVPNMSFCQHFTLL-NVAGAYWRGNSDNKMLQRIYG 64

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISY 282
           TA++ ++ L  +L  LEE+ KRDHRK+ +++DLFH+ ++  G++FWH  GW IF+ L  +
Sbjct: 65  TAFHDKKALKAHLTRLEEAAKRDHRKIGKQLDLFHMQQEAPGMVFWHHNGWSIFRDLEVF 124

Query: 283 MRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           +R K+ +  Y+E+  P ++D+ LW++SGHWD Y   MF       T  + R +A+KPMNC
Sbjct: 125 IRAKLDEYGYQEVKGPLMMDRVLWERSGHWDKYADAMFT------TSSENREYAIKPMNC 178

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
           PGHV +FN GLKSYR+LP+R+AEFGS +RNEPSG+LHG+MRVRGFTQDDAH+FCT+ Q+ 
Sbjct: 179 PGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGIMRVRGFTQDDAHIFCTESQIQ 238

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E      ++   Y+ FGF+ I+VKLSTRPEKRVGSD +WD +E  +K  L+++      
Sbjct: 239 EEVTNCIKMVYDTYQTFGFDNIVVKLSTRPEKRVGSDEIWDQSEEALKQSLESM------ 292

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
            I   +  GEGAFYGPK E+ L D + R WQCGT+Q+DFNLP R  A YV  ++E+  PV
Sbjct: 293 DIPYEIQEGEGAFYGPKIEFTLYDCLDRAWQCGTVQLDFNLPGRLGATYVGENNERLVPV 352

Query: 522 MIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLS 581
           MIHRA+ GS+ERFIGI+IE + G  P WL+P QA++  IT     Y QEI   L+   + 
Sbjct: 353 MIHRAILGSLERFIGILIEEYAGFFPTWLAPEQAVLMNITDKQSGYVQEIVQKLQKSGIR 412

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            + D RNE I +KIREH++K++P +++ GD+E     I +R        K  + D I  +
Sbjct: 413 AKADLRNEKIGFKIREHTLKRVPYMLVVGDQEMEAGEIAVRTRKGKDLGKFKVDDFIAYI 472

Query: 642 TKE 644
             E
Sbjct: 473 QDE 475


>gi|320165002|gb|EFW41901.1| Tarsl2 protein [Capsaspora owczarzaki ATCC 30864]
          Length = 777

 Score =  500 bits (1286), Expect = e-139,   Method: Composition-based stats.
 Identities = 227/722 (31%), Positives = 337/722 (46%), Gaps = 104/722 (14%)

Query: 18  PVHATGSDVAESISRS---LAKKAVA-------VAINGKVCDLSDPV--------REG-- 57
               T  D+A     S   LAK A+          +NGK  DL+ P+        ++   
Sbjct: 63  AAPVTV-DLASDSKASVIQLAKAALGSTLELVTCTVNGKPWDLTRPLALFINEHAQDAPS 121

Query: 58  ---SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPII-EDGFYYDFD--- 109
               +E+++ +   +  V  HS AH++  A++ ++ + V +  GP I E GF+Y+     
Sbjct: 122 STLEVELLSFDSNAAKHVAWHSAAHVLGAAMEEVYGDDVVLCDGPAISEGGFFYEGMLAN 181

Query: 110 KEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESI---- 165
                S+ +LA +  K    I+   P+ +  +S   A  +    +  +K   +       
Sbjct: 182 GRGSISTTDLAPLVAKATAFISAKHPYQRVSVSVADALAM--FPENPFKQHFIRKAAAAA 239

Query: 166 -PAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPM-------- 216
            P+   +++YR G++ DLCRGPH+ +TG V        V+ A W                
Sbjct: 240 APSSPLISIYRCGDFVDLCRGPHIINTG-VVGAITFHAVSAAEWASPLASAPAALPSPIP 298

Query: 217 LSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIF 276
           L R+YG ++     L +++   EE++ RDHR +     LF       G  F    G KI 
Sbjct: 299 LQRVYGISFPKAAMLKEWVTAREEAKLRDHRLIGAAQQLFMFHPYSPGSAFMLPHGMKII 358

Query: 277 QTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK------------- 322
             L  Y+R       Y+E++TP V  + LW+ SGH   Y  +MFAV              
Sbjct: 359 SRLQEYIRLAYIHYGYQEVSTPIVYSKELWETSGHLQHYAQDMFAVTGGLTPAAPAAGAA 418

Query: 323 ---------CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP 373
                     AD       T ALKPMNCPGH  +F     SYRELP+RLA+F  ++RNE 
Sbjct: 419 AGAAGHSHHHADSDASSDATQALKPMNCPGHCLIFQRKHYSYRELPIRLADFSPLHRNEA 478

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
            G+L GL RVR F QDDAH+FCT EQ+  E L +   +  +Y   GF +  +KLSTRPE 
Sbjct: 479 KGALSGLTRVRRFHQDDAHIFCTPEQIQAEILNVLGFVREVYGRLGFSEFTLKLSTRPES 538

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
            VGS   WD AE+ +K  L     S     N  +  G+GAFYGPK +  ++DAIGR  Q 
Sbjct: 539 FVGSIEQWDYAESCLKDALQQTCGS-----NWTLNPGDGAFYGPKIDITIRDAIGRQHQT 593

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI 553
            T+Q+DF LP RF   Y +++ +   PVMIHRAV GS+ER   I+IEN  G  PLWLSP 
Sbjct: 594 ATVQLDFQLPQRFGLRYFDANQQAHTPVMIHRAVLGSLERMFAILIENTAGRWPLWLSPR 653

Query: 554 QAIVTTITSSAVEYAQEIANLLKSHHLS-------------------------------I 582
           Q  V ++  S  EYA E+   L+   L                                +
Sbjct: 654 QVAVCSVDPSVNEYAAEVCKQLEKVSLRLPGSVFEVKNNVTTDSSAATPNGSSSAFALQV 713

Query: 583 ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           E D  +  ++ KIR+  + +   I++ G +EA++R++ +R         +S    + +L 
Sbjct: 714 EADLSDNRLSKKIRDAQVSQFNYIVVTGAREAADRTLNVRDRTGAQLGTMSFDKFVQLLH 773

Query: 643 KE 644
            +
Sbjct: 774 DQ 775


>gi|51598972|ref|YP_073160.1| threonyl-tRNA synthetase [Borrelia garinii PBi]
 gi|73919774|sp|Q660F3|SYT_BORGA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|51573543|gb|AAU07568.1| threonyl-tRNA synthetase [Borrelia garinii PBi]
          Length = 582

 Score =  499 bits (1284), Expect = e-139,   Method: Composition-based stats.
 Identities = 243/578 (42%), Positives = 360/578 (62%), Gaps = 16/578 (2%)

Query: 67  PRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKM 126
              L   RHS AH+MAEAV  ++P  ++AIGP I+DGFYYDF+ + P + D L  IE +M
Sbjct: 8   EDILYKKRHSIAHVMAEAVCDLFPNTKIAIGPPIKDGFYYDFEFKNPITEDSLLDIENRM 67

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGP 186
           +EI+   S F K+ +S E+A E+F+   E YK++++++   +  +++Y+   + DLCRGP
Sbjct: 68  REILKTGSSFEKEIISLEQALEIFK--DEPYKIDLIKNFDLQNEISIYKSHNFIDLCRGP 125

Query: 187 HVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           HV +  ++  K FKL  +AGAYWRG+    ML+RIYGT WN ++EL  YL   EE +KRD
Sbjct: 126 HVDNMNKIDPKAFKLTGIAGAYWRGNEKNTMLTRIYGTLWNNEKELRSYLNLREEIKKRD 185

Query: 246 HRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQH 303
           HRKL +E+DLF I E+ G G+IF+H  G KI   +  + R +  K+ Y+ + TP V    
Sbjct: 186 HRKLGKELDLFSIHEEIGPGLIFFHPNGAKIRALIEDFWREEHSKNGYDILFTPHVGKSW 245

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LWQ SGH + Y+ +MF     +    D   + LKPMNCP H+A++N G  SYR+LP R A
Sbjct: 246 LWQTSGHLNFYKDSMF-----EKIEMDKSDYYLKPMNCPFHIAIYNTGKHSYRDLPFRWA 300

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           E G+VYR E  G+LHG+MR RGFTQDDAH+ CT  Q+ +E  ++    I ++  FGF  +
Sbjct: 301 ELGTVYRYEKIGALHGMMRARGFTQDDAHIICTHSQVVDEIKEVLRFAIYMWSKFGFNSL 360

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
              LST+P+K VG+++ W+ +  ++K  L   +      +   +  G GAFYGPK +  +
Sbjct: 361 KAYLSTKPDKSVGNNSDWEMSLKVLKEALSDFE------VPYEIDKGGGAFYGPKIDLKI 414

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D++ R+WQ  TIQ DFNLP RFN  Y +   ++  P MIHRA+ GSIERF GI++E++ 
Sbjct: 415 VDSLEREWQMSTIQFDFNLPERFNMTYTSEDGKEKRPFMIHRALLGSIERFFGILVEHYG 474

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  PLWLS +QA++  + +   +Y  ++ N  K+  + I+ D  +  +N KIRE+  KKI
Sbjct: 475 GAFPLWLSHVQAVIIPVNNIVEDYTIKVFNKFKNAGIRIKLDNSSSRMNAKIREYQAKKI 534

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           P + I G++EA E  I IR   +     + L +A+ ++
Sbjct: 535 PYMFIIGEREAIEERISIRTRTNEQINGIELDEALKLI 572


>gi|20429011|emb|CAC79651.1| threonyl-tRNA synthetase [Oryza sativa Japonica Group]
          Length = 531

 Score =  498 bits (1282), Expect = e-138,   Method: Composition-based stats.
 Identities = 201/537 (37%), Positives = 311/537 (57%), Gaps = 18/537 (3%)

Query: 110 KEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKE 169
            +   +      I+ + Q+ +A   PF +  +S  +A E+F      +KVEI+  +P  +
Sbjct: 6   NDLTLNETHFGIIDAQAQKAVAEKQPFERIEVSRAEALEMFAE--NKFKVEIINELPEDK 63

Query: 170 NVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQ 229
            +T+YR G   DLCRGPH+ +T  VK F   +K + +YWRG ++R  L R+YG ++   +
Sbjct: 64  TITVYRCGPLVDLCRGPHIPNTSFVKAF-ACLKASSSYWRGKADRESLQRVYGISFPDSK 122

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK- 288
            L +Y + LEE++KRDHR L +  DLF   +   G  F+   G  I+  L+ ++R++ + 
Sbjct: 123 RLKEYKHLLEEAKKRDHRLLGQTQDLFFFHQLSPGSCFFLPHGAIIYNKLMDFLRQQYRD 182

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
             Y+E+ +P + +  LW+ SGH  +Y+ NMF  +       + + F LKPMNCPGH  +F
Sbjct: 183 RGYQEVLSPNIYNMQLWETSGHAANYKENMFVFEI------EKQEFGLKPMNCPGHCLMF 236

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
            H ++SYRELP+R+A+FG ++RNE SG+L GL RVR F QDDAH+FC + Q+ +E   + 
Sbjct: 237 EHRVRSYRELPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCRESQIKDEVKAVL 296

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
           + I  +Y+ FGF+  + +LSTRPEK +G    W+ AE  +   L+      Q      + 
Sbjct: 297 DFINYVYEIFGFKYEL-ELSTRPEKYLGDIETWNKAEQQLTEALNEFGKPWQ------IN 349

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK-CHPVMIHRAV 527
            G+GAFYGPK +  + DA+ R +QC T+Q+DF LP RF   Y      K   PVMIHRA+
Sbjct: 350 EGDGAFYGPKIDIGVFDALKRKFQCATLQLDFQLPLRFKLTYSAEDEAKLERPVMIHRAI 409

Query: 528 FGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR 587
            GS+ER   I++E++ G  PLWLSP QAIV +I+S++VEYA+++   +      +  D  
Sbjct: 410 LGSVERMFAILLEHYNGKWPLWLSPRQAIVCSISSNSVEYAKQVRVRIHEAGFHVAIDET 469

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           + TI  K+RE  + +   I++ G +EA    + +R         VS+ D I    +E
Sbjct: 470 DRTIQKKVREAQLAQFKYILVVGAQEAETGQVSVRVRDKAELATVSIDDIITRFKEE 526


>gi|65319684|ref|ZP_00392643.1| COG0441: Threonyl-tRNA synthetase [Bacillus anthracis str. A2012]
          Length = 485

 Score =  498 bits (1282), Expect = e-138,   Method: Composition-based stats.
 Identities = 218/494 (44%), Positives = 335/494 (67%), Gaps = 16/494 (3%)

Query: 153 KKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDS 212
             +   +E+LE+IP+ E+VTLY+QGE+ DLCRGPH+ STG +K F     V+GAYWRGDS
Sbjct: 1   MNDRLXLELLEAIPSGESVTLYKQGEFVDLCRGPHLPSTGYLKVFQLTH-VSGAYWRGDS 59

Query: 213 NRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKG 272
           N  +L RIYG A+++Q+EL +YL+F+EE+ KR+HRKL  E++LF  +E+  G+ F+  KG
Sbjct: 60  NNQVLQRIYGVAFSSQKELEEYLHFVEEAAKRNHRKLGNELELFMFSEEAPGMPFYLPKG 119

Query: 273 WKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
             I   L +++R  + + +Y+E+ TP +++Q +W++SGHW  Y+ NM+  +       D 
Sbjct: 120 QIIRNELEAFLREIQKEYNYQEVRTPFMMNQEVWERSGHWGHYKDNMYFSEV------DN 173

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
           ++FALKPMNCPGH+ +F + L SYRELP+R+ EFG V+R+E SG+L+GL+RVR F QDDA
Sbjct: 174 KSFALKPMNCPGHMLMFKNKLHSYRELPIRMCEFGQVHRHEFSGALNGLLRVRTFCQDDA 233

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
           H+F T EQ+ +E   +   I  +YK FGFE   V+LSTRPE  +G D LW+ AE  ++ V
Sbjct: 234 HLFVTPEQIEDEIKSVMAQIDYVYKTFGFEYE-VELSTRPEDSMGDDELWEQAEASLENV 292

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
           L ++           +  G+GAFYGPK ++ +KDA+ R  QCGTIQ+DF +P +F+  Y+
Sbjct: 293 LQSLNY------KYRLNEGDGAFYGPKIDFHIKDALNRSHQCGTIQLDFQMPEKFDLNYI 346

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQE 570
           +  +EK  PV+IHRAV GS++RF+ I+IE+F G  P W++P+Q  V  ++++  V+YA E
Sbjct: 347 DEKNEKRRPVVIHRAVLGSLDRFLAILIEHFGGAFPAWVAPVQVKVIPVSNAVHVQYADE 406

Query: 571 IANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
           +A+ L    + +E D R+E + YKIRE  ++K+P +++ GDKE    ++ +R++G   + 
Sbjct: 407 VADKLAQAGVRVERDMRDEKLGYKIREAQMQKVPYVLVIGDKEMENGAVNVRKYGEEKSG 466

Query: 631 KVSLLDAIPILTKE 644
            + L   +  + +E
Sbjct: 467 VIELDMFVESMKEE 480


>gi|302816173|ref|XP_002989766.1| hypothetical protein SELMODRAFT_447798 [Selaginella moellendorffii]
 gi|300142543|gb|EFJ09243.1| hypothetical protein SELMODRAFT_447798 [Selaginella moellendorffii]
          Length = 564

 Score =  497 bits (1280), Expect = e-138,   Method: Composition-based stats.
 Identities = 196/585 (33%), Positives = 305/585 (52%), Gaps = 54/585 (9%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII--EDGFYYDFDKE--QPFSSDELAQ 121
           D +      HS AHI+ E+++  +   ++ IGP     +GFYYD   E  +  + +    
Sbjct: 20  DEQGRDTFWHSSAHILGESLEQAY-GCKLCIGPCTTRGEGFYYDAFYEDGRTLNEENFPA 78

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           ++ ++ + +    PF +  ++ ++A E+       +KVEI+  +P    +T+YR G   D
Sbjct: 79  VQSQVTKAVQESQPFERIQVTRQQALEI--FSDNQFKVEIINDLPEDAVITVYRCGPLVD 136

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH+ +T  VK F                                 L  Y+   EE+
Sbjct: 137 LCRGPHIPNTSYVKAFSC-------------------------------LKAYMTKYEEA 165

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVL 300
           +KRDHR L +   LF   E   G  F+  KG  ++  L+ ++R + +   ++E+ TP + 
Sbjct: 166 KKRDHRLLGKNQQLFFFHELSPGSAFFLPKGTIVYNKLLQFIRSEYRKRGFDEVVTPNIY 225

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  LW+QSGH   Y+ NMF  +       + + F LKPMNCPGH  +F H ++SYRELP+
Sbjct: 226 NMKLWEQSGHAAHYKENMFVFEI------EKQEFGLKPMNCPGHCLLFQHRVRSYRELPL 279

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+A+FG ++RNE SG+L GL RVR F+QDDAH+FC + Q+++E     + +  +Y  FGF
Sbjct: 280 RIADFGVLHRNELSGALTGLTRVRRFSQDDAHIFCMESQVYDEVKGCLDFLDYVYTIFGF 339

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
              + KLSTRPE  +G  +LWD AE  +   L+      Q      +  G+GAFYGPK +
Sbjct: 340 TYDL-KLSTRPENFLGESSLWDRAEGALADALNAHAKPWQ------MNEGDGAFYGPKID 392

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK-CHPVMIHRAVFGSIERFIGIMI 539
             + DA+ R +QC TIQ+DF  P RF   Y      K   PV+IHRA+ GSIER   I++
Sbjct: 393 IQVSDALNRKFQCATIQLDFQSPIRFKLSYSAEDEAKIERPVIIHRAILGSIERMFAILL 452

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E+  G  P WLSP QAIV TI+    +YA+E+   L +    ++ D  +  ++ K+RE  
Sbjct: 453 EDNAGKWPFWLSPRQAIVLTISEKFKDYAEEVRAKLHAAGFEVDVDVSDRKVDKKVREAQ 512

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGST-TTQKVSLLDAIPILTK 643
           +     +++ G  E  +  + +R  GS      +++   I     
Sbjct: 513 MAHYNYLLVVGAMEQEKGEVNVRTRGSKGQRGCITIEKLIAEFQD 557


>gi|307721910|ref|YP_003893050.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Sulfurimonas
           autotrophica DSM 16294]
 gi|306980003|gb|ADN10038.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Sulfurimonas
           autotrophica DSM 16294]
          Length = 602

 Score =  497 bits (1280), Expect = e-138,   Method: Composition-based stats.
 Identities = 223/609 (36%), Positives = 366/609 (60%), Gaps = 23/609 (3%)

Query: 39  VAVAINGKVCDLSDPVR---EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVA 95
           +A+  +G++ D         EG  +I     P +L V+RHS AH+MA+A++S++P+ +  
Sbjct: 4   IAIKKDGEIIDTQTAKELGFEGE-QIHLDNSPEALEVLRHSTAHLMAQAIKSLYPDAEFY 62

Query: 96  IGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKE 155
           +GP++++GFYYDF         +L +IEK+M     +     K  ++ ++A+E  + K +
Sbjct: 63  VGPVVKEGFYYDFKTSAEIGEGDLKKIEKQMLSFAKKKYKIEKYEITMDEAKE--KFKDD 120

Query: 156 AYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRP 215
             K+E+++ IP+   V++Y+QG++ DLCRGPH+ + G ++ F KL K++GAY  GDS   
Sbjct: 121 HLKLEVMKRIPSD-TVSIYKQGDFEDLCRGPHLPNIGLIRYF-KLTKISGAYLGGDSKNE 178

Query: 216 MLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWK 274
           ML+RIYG A+  ++ L  ++  L E+EKRDHRK+  EM LF   E+   G   W   G +
Sbjct: 179 MLTRIYGIAFADKESLKAHMEQLAEAEKRDHRKIGNEMKLFTFREEVGAGFPIWLPAGGR 238

Query: 275 IFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           +   L S + +   K  YE +  P++L   LW  SGH+ +Y  NM+       T  D   
Sbjct: 239 LRARLESLLFKAHRKRGYEPVRGPEMLRSDLWMTSGHYQNYGENMYF------THIDELE 292

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
           F +KPMNC GH+ V+   L SYR+LP++  E+G V+R+E SG+LHGL RVR FTQDDAH+
Sbjct: 293 FGVKPMNCVGHIKVYEDELHSYRDLPIKYFEYGVVHRHEASGALHGLFRVREFTQDDAHI 352

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
           FC  +Q+  + +++ + +  I   F F+  M+ +ST+PEK VG D +W+ +   +K  +D
Sbjct: 353 FCRADQIEEQIIEVVDFVDKIMSTFEFDYKMM-ISTKPEKAVGDDKVWEISTQALKNAMD 411

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS 513
                 ++ +   +  G GAFYGPK +  + DAIGR+WQCGT+Q+DFNLP RF   Y   
Sbjct: 412 ------KNELAYEIDEGGGAFYGPKIDIKITDAIGREWQCGTVQLDFNLPERFKLEYNGE 465

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIAN 573
            ++K  PVMIHRA+ GS ERFIGI+ E++ G  P++++P Q  +  +  +  EYA+ +++
Sbjct: 466 ENDKIQPVMIHRAILGSFERFIGILTEHYAGEFPMFVAPTQVAIVPVAETHKEYAKLLSD 525

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            L   +   E   +N+++N +IR     ++P+I++ GD+E + +++ IR   +     +S
Sbjct: 526 KLIDINADSEIYAKNDSLNKRIRTAEKTRVPMIVVIGDEEIANKTVAIRDRRTREQYNLS 585

Query: 634 LLDAIPILT 642
             + + ++ 
Sbjct: 586 EEEFLKLIQ 594


>gi|213389878|gb|ACJ46005.1| threonyl tRNA synthetase [Palm lethal yellowing phytoplasma]
          Length = 641

 Score =  497 bits (1279), Expect = e-138,   Method: Composition-based stats.
 Identities = 225/649 (34%), Positives = 378/649 (58%), Gaps = 23/649 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +      I++FP   T  ++      +L  K +A   N ++ +L+  + + G +EI+
Sbjct: 1   MINIKLNKNLIQSFPCKITPIEIIRQNYFNLDSKPIAALFNNELIELNREIDQNGCLEIM 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
           T +D RS+ ++ HS AH++A+AV+ I+P+  + IGP I++GFYYD D  +   S + L +
Sbjct: 61  TIKDQRSIEILNHSTAHLLAQAVKRIFPKSLLNIGPTIKEGFYYDIDFLDYHISENSLIE 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEK M  I  R   +    ++ ++A EL       YK+++LE I     V++Y QGE+FD
Sbjct: 121 IEKMMHLISKRKIRYYSYEINIKEAYEL--FSNNPYKIQLLEEIQES-KVSVYFQGEFFD 177

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG H+ +T  ++ F KL+K++G+Y +G+S    L+RIYG ++   +EL  YL  LEE 
Sbjct: 178 LCRGIHLINTNIIQNF-KLLKISGSYLKGNSLNKKLTRIYGISFFHPKELKNYLKLLEER 236

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           +++DH+ + +E + F +  D   G   W  KG  I + +  Y+  ++++ DY+ + TP +
Sbjct: 237 KQKDHKNINKEQEFFMLTPDVGLGFPLWLPKGATIRRIIERYIVNKELEYDYQHVYTPVL 296

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +  L+Q SGH   Y+ NMF +      +++     L+PMNCP H+ +F   L+SY++LP
Sbjct: 297 ANIELYQTSGHLKLYKENMFPIM----KLQNDEKIVLRPMNCPHHMMIFKKKLRSYKDLP 352

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
            ++AE G ++R E SG++ GL R R  T +DAH+F T+ Q+ NE +KI N I  +YKDF 
Sbjct: 353 FKIAELGMMHRYEHSGAVSGLQRTRAMTLNDAHIFITENQIENEIIKIINFIFEVYKDFN 412

Query: 420 FEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
             +    LSTR     +K   ++ +W  +E I+K +L  +K      I     +G+ AFY
Sbjct: 413 ITEYYFNLSTRDVNNKKKYFENELIWQRSEFILKNILTELK------IPFKESVGDAAFY 466

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +  A+  +    T+Q+DF LP +FN  YV S +++ +P++IHRA+  ++ERF+
Sbjct: 467 GPKIDIQVLTALNNEETLSTVQLDFLLPKKFNLTYVGSDNKEHNPILIHRAIISTLERFV 526

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITS-SAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
             +IE  KG  PLWL+P+Q ++  I +   ++Y Q+I  + K ++   E + ++ +++YK
Sbjct: 527 AFLIEKNKGFFPLWLAPVQVVLIPINNIKYLKYTQKINKIFKKNNFRSEINDKDNSLSYK 586

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           IRE    KIP  I+ G+KE    ++  R + S  +Q VS+ + I I  K
Sbjct: 587 IRESQKNKIPYQIVIGEKELLNSTLTFREYRSNLSQTVSIEEFIDIFNK 635


>gi|111219789|ref|YP_710583.1| threonyl-tRNA synthetase [Frankia alni ACN14a]
 gi|111147321|emb|CAJ58970.1| Threonyl-tRNA synthetase (Threonine--tRNA ligase) [Frankia alni
           ACN14a]
          Length = 682

 Score =  497 bits (1279), Expect = e-138,   Method: Composition-based stats.
 Identities = 218/653 (33%), Positives = 348/653 (53%), Gaps = 41/653 (6%)

Query: 18  PVHATGSDVAESISRSLA-KKAVAVAIN--GKVCDLSD-PVREGSIEIITPEDPRSLAVI 73
           P  ++ ++  ++   +++   A+ V  +  G + DL+  P  +  +  +    P  LAV+
Sbjct: 16  PAGSSFAEAVKAAGLTMSGPNAIVVVRDAAGTLRDLTAVPAVDTEVTAVPMSSPDGLAVL 75

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           RHS AH+MA+AVQ ++ E ++ IGP IE+GFYYDFD  +PF +++L +I+ +M+EI+ + 
Sbjct: 76  RHSTAHVMAQAVQDLFDEARLGIGPPIENGFYYDFDVPKPFQAEDLERIQARMREIVKQG 135

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPA----------KENVTLY-----RQGE 178
             F ++ L+  +     E   E +K+E+++                 +T+Y     R GE
Sbjct: 136 QRFRRRVLT-SREAAREELAAEPFKLELVDIKGEASGAAATEVGSGELTMYDNVDPRSGE 194

Query: 179 --WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
             W DLCRGPH+ ST  +  F  L + + AYWRGD   P L RIYGTAW T+  L +YL 
Sbjct: 195 VVWTDLCRGPHLPSTHLIPAFALL-RNSAAYWRGDEKNPQLQRIYGTAWPTRPALKEYLT 253

Query: 237 FLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEI 294
            L E+ KRDHR++  ++DLF  + + G G+  W   G  I   L  + R+ + +  Y  +
Sbjct: 254 ALAEAAKRDHRRIGEDLDLFAFSPEIGKGLPLWLPNGTIIRDELEGWARQTERRLGYRRV 313

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
            TP +  + L+  SGH   Y  +++A         +   + LKPMNCP H  V+    KS
Sbjct: 314 VTPHITQEDLYFLSGHLPYYAEDLYAPIQI-----EGENYYLKPMNCPHHHMVYKARPKS 368

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YRELP ++AE+G+VYR E SG LHGLMR RGFTQ+DAH++CT+EQ   + L++  +    
Sbjct: 369 YRELPYKIAEYGTVYRFERSGQLHGLMRARGFTQNDAHIYCTREQAKEQFLEVMRMHDEY 428

Query: 415 YKDFGFEKIMV----KLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
           Y+  G     +    +      K      +W+DAE I +  +D      +  I     LG
Sbjct: 429 YRALGITDFYMVLALRDPANTTKYHDDAQMWEDAERITREAMD------ESGIPYVEELG 482

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
             A YGPK ++I++   G+++   T QVD   P RF+  Y ++       V+IHRA  GS
Sbjct: 483 GAAHYGPKVDFIIRSVTGKEFAASTNQVDLYTPQRFDLKYHDADGTDKQVVVIHRAPLGS 542

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
            ERF+  + E+F G  P+WL+P Q  V  I     EYA+ ++  L    + ++ D  +  
Sbjct: 543 HERFVAFLTEHFGGAFPVWLAPEQVRVIPIMPELDEYAETVSQALLDADVRVDVDASDGR 602

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  ++R    +KIP+I++ G +E  E S+ +R      T  + L D +  + +
Sbjct: 603 LPARVRTAVTRKIPLIVVVGRREVEEGSVSVRDRSGQET-SMPLADFVRRVRE 654


>gi|168702447|ref|ZP_02734724.1| threonyl-tRNA synthetase [Gemmata obscuriglobus UQM 2246]
          Length = 620

 Score =  497 bits (1279), Expect = e-138,   Method: Composition-based stats.
 Identities = 200/594 (33%), Positives = 321/594 (54%), Gaps = 29/594 (4%)

Query: 69  SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQE 128
           +L  +RHS AH++A+AV   +P+ +  IGP  E GFYYDFD +   +  EL  I  +M++
Sbjct: 22  ALYKLRHSLAHVLAQAVVEKFPQAKPTIGPPNEYGFYYDFDLDVNPTEGELEWIANRMKQ 81

Query: 129 IIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-----------VTLYRQG 177
           II     F  + +S ++ R LF+     YK+E+++ +   ++           +T+Y+Q 
Sbjct: 82  IIKGKHAFKVREISADEGRALFK--DNPYKLELIDGLTKGQDEYGNASAAAPVLTVYQQD 139

Query: 178 EWFDLCRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
            + DLCRGPHV +T  +  K FK+ +V G+YWRGDS    L R + TAW +  +L  +L 
Sbjct: 140 TFVDLCRGPHVEATNDLDPKGFKIQQVTGSYWRGDSKNKSLKRFHATAWASGDDLKAHLA 199

Query: 237 FLEESEKRDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEI 294
            LEE+ KRDHRK+ RE+DLF +    GSG      KG  I + L +++   + +  Y  +
Sbjct: 200 RLEEAAKRDHRKVGRELDLFANEPVFGSGFPMLLPKGATIRRLLETFITDYERRAGYLHV 259

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
            TP +  + L++ SGHWD Y+ +MF      +   D     L+PM CP H+ V+    +S
Sbjct: 260 FTPDIAKKELYKISGHWDHYKDSMFPPMDMGEGGNDDEELCLRPMCCPHHIQVYKSKARS 319

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YR+LP+R+AE G++YR E SG + GL RVR  T +DAH+F   +Q+ +E   +  L+   
Sbjct: 320 YRDLPIRIAELGNMYRFERSGVVGGLSRVRCMTLNDAHLFVRPDQVKHEIAGVLQLMKKA 379

Query: 415 YKDFGFEKIMVKLSTRPEK-------RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGV 467
           Y D G  +   +LS   +         V + A+W+ +  +++ VL        +  N   
Sbjct: 380 YADLGITEYRFRLSKNADPDGPPSDKYVDNPAMWESSTKMLREVLQESGMPFFEAWN--- 436

Query: 468 LLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAV 527
              E AFYGPK +  +KD +GR+    TIQ D +LP++F   Y +S      PVMIHR V
Sbjct: 437 ---EAAFYGPKIDVQVKDVMGREETLSTIQADQHLPAKFELEYKDSDDTPKRPVMIHRGV 493

Query: 528 FGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR 587
             ++ER +  +IE + G  P+WL+P+Q  +  I      +AQ++ + L      ++ D  
Sbjct: 494 ISTMERMMSYLIELYAGAFPVWLAPVQVAIVPIADRHFAFAQKLGDELLDKDYRVDVDLG 553

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           ++ +  KIR+  ++KIP I++ GDKE    ++ +R    T        + + +L
Sbjct: 554 DKRMQAKIRDAQLQKIPYILVIGDKEMEANAVAVRLRDGTDLGAKPAAEFVAML 607


>gi|149057086|gb|EDM08409.1| threonyl-tRNA synthetase-like 2, isoform CRA_b [Rattus norvegicus]
          Length = 708

 Score =  496 bits (1276), Expect = e-138,   Method: Composition-based stats.
 Identities = 200/542 (36%), Positives = 296/542 (54%), Gaps = 19/542 (3%)

Query: 105 YYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES 164
           Y      +  SS EL+ +E   + II    PF +  +S +   E+F+     +K  IL+ 
Sbjct: 170 YQVAAGIRVVSSTELSALENICKTIIKEKQPFERLEVSKDSLLEMFKY--NKFKCRILKE 227

Query: 165 IPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTA 224
                  T+YR G   DLC+GPHVR TG++K   K+ K +  YW G+     L R+YG +
Sbjct: 228 KVDTPTTTVYRCGPLIDLCKGPHVRHTGKIK-AIKIFKNSSTYWEGNPEMETLQRVYGIS 286

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR 284
           +   + +  +  F EE+  RDHRK+ +E +LF   +   G  F+  +G  I+ TL+ ++R
Sbjct: 287 FPDSKMMRDWEKFQEEARSRDHRKIGKEQELFFFHDLSPGSCFFLPRGAFIYNTLMDFIR 346

Query: 285 RKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPG 343
            +    ++ E+ +P + +  LW+ SGHW  Y  NMF      DT      FALKPMNCPG
Sbjct: 347 EEYHKRNFTEVLSPNMYNSKLWETSGHWQHYSNNMFTFDIEKDT------FALKPMNCPG 400

Query: 344 HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE 403
           H  +F H  +S+RE+PVR A+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+  E
Sbjct: 401 HCLMFAHRPRSWREMPVRFADFGVLHRNELSGTLTGLTRVRRFQQDDAHIFCMVEQIEEE 460

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
                + + S+Y  FGF   +  LSTRPE  +G   +WD+AE  ++  L       +   
Sbjct: 461 IKGCLHFLQSVYSTFGFSFQLN-LSTRPEHFLGETEIWDEAERQLQNSLTGFGKPWK--- 516

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC-HPVM 522
              +  G+GAFYGPK +  +KDAIGR  QC TIQ+DF LP RFN  YV+   +    PV+
Sbjct: 517 ---INPGDGAFYGPKIDIKIKDAIGRYHQCATIQLDFQLPIRFNLTYVSKDGDDKNRPVI 573

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSI 582
           IHRA+ GS+ER I I+ EN+ G  PLWLSP Q ++  +  +   YA +++          
Sbjct: 574 IHRAILGSVERMIAILSENYGGKWPLWLSPRQVMIIPVGPACENYALQVSKECFEEGFMA 633

Query: 583 ETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           + D  +  T+N KIR   + +   I++ G+KE    S+ +R   +    ++S+   I  L
Sbjct: 634 DVDLDDSCTLNKKIRNAQLAQYNFILVVGEKEKLNNSVNVRTRDNKIHGEISITSVIEKL 693

Query: 642 TK 643
             
Sbjct: 694 KN 695


>gi|330977708|gb|EGH77611.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. aptata str. DSM
           50252]
          Length = 477

 Score =  495 bits (1273), Expect = e-137,   Method: Composition-based stats.
 Identities = 240/493 (48%), Positives = 339/493 (68%), Gaps = 18/493 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS ++F    + +DVA SI   LAK  VA  ++GK+ D  D +  + S+
Sbjct: 1   MP---TITLPDGSQRSFDHAVSVADVALSIGAGLAKATVAGKVDGKLVDACDLIENDASL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           +IITP+D   L +IRHSCAH++  AV+ ++P  ++ IGP+I+DGFYYD   E PF+ D++
Sbjct: 58  QIITPKDQEGLEIIRHSCAHLVGHAVKQLYPTAKMVIGPVIDDGFYYDIAYEPPFTPDDM 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A IE++MQ++I +D   +K+     +  E+F ++ E YK+ ++E +P ++ + LY   E+
Sbjct: 118 AAIEQRMQQLIEKDYDVIKKVTPRAEVIEVFTARHEDYKLRLVEDMPNEQAMGLYYHEEY 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            D+CRGPHV +T  +K F KL K++GAYWRGD+    L R+YGTAW  +++L  Y+  +E
Sbjct: 178 VDMCRGPHVPNTRFLKSF-KLTKLSGAYWRGDAKNEQLQRVYGTAWADKKQLAAYILRIE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           ++EKRDHRK+ + + LFH  E+  G++FWH +GW ++Q L  YMR+ + ++ Y EI TPQ
Sbjct: 237 KAEKRDHRKIGKRLGLFHTQEEAPGMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHW +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYREL
Sbjct: 297 VVDRSLWEKSGHWANYADNMFT------TESESRDYAIKPMNCPCHVQVFNQGLKSYREL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFG+ +RNEPSG+LHG+MRVRGFTQDDAH+FCT++QM  E      L + +Y DF
Sbjct: 351 PMRLAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEDQMQAESAAFIKLTLDVYADF 410

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+ I +KLSTRPEKRVGSD LWD AE+ +   LD+        +   +  GEGAFYGPK
Sbjct: 411 GFKDIELKLSTRPEKRVGSDELWDRAESALASALDSAG------LPYDLQPGEGAFYGPK 464

Query: 479 FEYILKDAIGRDW 491
            E+ LKD +GR W
Sbjct: 465 IEFSLKDCLGRVW 477


>gi|307128591|ref|YP_003880621.1| uracil phosphoribosyltransferase [Candidatus Sulcia muelleri CARI]
 gi|306483053|gb|ADM89923.1| uracil phosphoribosyltransferase [Candidatus Sulcia muelleri CARI]
          Length = 640

 Score =  494 bits (1272), Expect = e-137,   Method: Composition-based stats.
 Identities = 238/650 (36%), Positives = 374/650 (57%), Gaps = 23/650 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESI-SRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
            I +TF +  +  +    T   +   I    L+KK ++V+ING+  +L   +  +  IE 
Sbjct: 1   MINITF-NKVVFKYDPPITPLKIKSDIIENKLSKKIISVSINGEQKELYTNIYNDCEIEF 59

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPF-SSDELA 120
            T E         HS +H++A+++   +P+ ++ IGP I +GFYYD D  + F S  +  
Sbjct: 60  YTWEHEMGKKAFWHSSSHLLAQSILDFYPKAKLNIGPAINNGFYYDIDFGKSFFSEKDFY 119

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IE  M    ++   +   Y+S  +A++ ++     YK++IL +I     VT+ +   + 
Sbjct: 120 KIEINMLFNASKCFNYELYYISKSEAKKYYK--NNIYKLDILNNIKKN-YVTICKHDNFI 176

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRG H+ +T  +K   K++ ++G YW+GD N   L+RIY  +  ++++L +Y    +E
Sbjct: 177 DLCRGCHIPNTYFIK-AVKILNISGVYWKGDKNNKQLTRIYAISSPSKKDLDKYFLKKKE 235

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           S+KRDHRK+ ++++LF  +     G+  W  KG+ + + + +++    +   YE + TP 
Sbjct: 236 SKKRDHRKIGKKLELFTFSNIVGQGLPIWLPKGFLLKKKIENFLLNLNQKIGYEMVTTPH 295

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           + ++ L+  SGHW+ Y  N F       +      F LK MNCP H  ++N+   SY++L
Sbjct: 296 IANKKLYNISGHWEKYYENSFNTFI---SPNKEEQFLLKSMNCPHHCEIYNYKKFSYKDL 352

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P R AEFG+VYR E SG LHGL RVR FTQDDAH+FCTKEQ+  E   + ++II I++  
Sbjct: 353 PKRFAEFGTVYRYEKSGELHGLTRVRSFTQDDAHIFCTKEQLIEELKSVIDMIIFIFQKL 412

Query: 419 GFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           GF K   ++S R +K     +GS   W+ +E       D IK + + +I+T +  GE AF
Sbjct: 413 GFSKYKAQISLRDKKKKYKYIGSKEHWEKSEK------DLIKATKEKKIDTYIKYGEAAF 466

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +++++D +GR+WQ GT+QVD+NLP RFN FY N+ ++   P+MIHRA  GS+ERF
Sbjct: 467 YGPKLDFMVQDILGRNWQLGTVQVDYNLPERFNLFYTNNKNKLIRPIMIHRATLGSLERF 526

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
           I I+IEN +GN PLWLSPI   +  I      Y+++I NLL    +    D R E+++ K
Sbjct: 527 IAILIENTEGNFPLWLSPIPIRIIPILEKNFFYSKKILNLLMQLEIQSFIDSRIESLSKK 586

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           I +  I KIP+I++ GDKE    S+ IR +       +SL   I  L KE
Sbjct: 587 IIDAEIDKIPLILVLGDKEEKLNSVSIRSYKEKKIIFLSLERFINFLKKE 636


>gi|229825871|ref|ZP_04451940.1| hypothetical protein GCWU000182_01235 [Abiotrophia defectiva ATCC
           49176]
 gi|229789891|gb|EEP26005.1| hypothetical protein GCWU000182_01235 [Abiotrophia defectiva ATCC
           49176]
          Length = 604

 Score =  493 bits (1269), Expect = e-137,   Method: Composition-based stats.
 Identities = 237/595 (39%), Positives = 344/595 (57%), Gaps = 22/595 (3%)

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
            E    L V RHS AH++A+AV  I+ E VQ+AIGP I+DGFYYDF   +  + D+   I
Sbjct: 1   MEREEFLQVYRHSLAHVLAKAVFEIFGESVQIAIGPQIDDGFYYDFVLPRAVTEDDYKVI 60

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE-WFD 181
           E KM+EI+ R   + ++ L+ E+A E  + K + +KVEI+  +P    ++ Y  G+ + D
Sbjct: 61  EDKMREILKRKENWTRKELTKEEALE--KFKDQKFKVEIINDLPEDAIISTYNTGDDFCD 118

Query: 182 LCRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           LCRGPH+ ++ ++    F++   +GAYWRGD  R  L RIY  A+ T+ EL  +L  + E
Sbjct: 119 LCRGPHIENSAELLNVAFQVKSASGAYWRGDEKRDRLQRIYVYAFPTKDELKAHLNLIRE 178

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           + +RDH+KL  ++DLF   E   G+ +W  +GW+++Q LI++ R+  +K  Y+EI+ P +
Sbjct: 179 ALERDHKKLGPKLDLFMFNETAPGMPYWLPRGWRLYQELINFWRKIHVKHGYQEISAPII 238

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADD----------TIKDLRTFALKPMNCPGHVAVFN 349
            ++ LW  SGHW  Y  NMF +   DD           +    TFA KPMNCP  +  + 
Sbjct: 239 NNRKLWLISGHWAHYVNNMFIIPGFDDDLTQRTLQNIELDSDSTFAAKPMNCPNAMLTYK 298

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
             + SY+ELP+R  E   ++R E SG L+GL RV+ F QDD H F  + Q+  E   +  
Sbjct: 299 RTVHSYKELPIRYNEIDVIHRKEKSGQLNGLFRVQEFRQDDDHTFVMESQIEEEIADVME 358

Query: 410 LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL 469
           +   IY  FG      +LSTRPE  +G   +WD AE  +K +LD             V  
Sbjct: 359 VADQIYSTFGITY-RAELSTRPEDFMGDIEVWDRAEAALKKILDKKYGEGG----YEVNE 413

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG 529
           G+GAFYGPK +  +KDA+GR+WQCGTIQ+DF LP  F   Y +S      PV+IHRA+FG
Sbjct: 414 GDGAFYGPKIDLQMKDALGREWQCGTIQLDFQLPHNFELTYQDSDGTIKEPVVIHRAIFG 473

Query: 530 SIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE 589
           S ERFIGI+IEN+KG  P W+SP Q  +  I +   EYA+EI + L    + +E ++ ++
Sbjct: 474 SFERFIGILIENYKGEFPFWISPYQVAIVPIRTEHNEYAKEIEDALYEMGIRVEANYDDK 533

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT-QKVSLLDAIPILTK 643
            +N KI+   + K P II+ GDKE  ER++ I   G       V L     ++ K
Sbjct: 534 NMNEKIKGFKLMKDPYIIVVGDKEKEERTVSITVRGQKQQMHGVPLDTFYKMIRK 588


>gi|73951035|ref|XP_857273.1| PREDICTED: similar to threonyl-tRNA synthetase-like 2 isoform 5
           [Canis familiaris]
          Length = 687

 Score =  493 bits (1268), Expect = e-137,   Method: Composition-based stats.
 Identities = 217/549 (39%), Positives = 310/549 (56%), Gaps = 21/549 (3%)

Query: 2   PSDIKLTFPDGSIKNFPVHAT-GSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
            + I +    G      V  T    VA  IS  LA+  V   +NG++ DL  P+  + ++
Sbjct: 156 SNVITVRMAGGKTVEGEVWTTTPYQVAAEISPELAESTVVAKVNGELWDLDRPLEGDSTL 215

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDE 118
           E++T ++  + AV  HS AHI+ EA++  +    +  GP IE+GFYYD   E +  SS E
Sbjct: 216 ELLTFDNEEAQAVYWHSSAHILGEAMELYYGGH-LCYGPPIENGFYYDMFIEDRAVSSTE 274

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L+ +E   + II    PF +  +S E   E+F+     +K  IL         T+YR G 
Sbjct: 275 LSALENICKTIIKEKQPFERLEISKEVLLEMFKY--NKFKCRILNEKVHTSTTTVYRCGP 332

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLC+GPHVR TG++K   K+ K +  YW G+     L RIYG ++   + +  +  F 
Sbjct: 333 LIDLCKGPHVRHTGKIK-AIKIFKNSSTYWEGNPEMETLQRIYGISFPDNKMMKTWEKFQ 391

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE++ RDHRK+ +E +LF   +   G  F+  +G  I+ TL+ ++R +    ++ E+ +P
Sbjct: 392 EEAKNRDHRKVGKEQELFFFHDLSPGSCFFLPRGAFIYNTLMDFIREEYHRRNFTEVLSP 451

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  LW+ SGHW  Y  NMF      DT      FALKPMNCPGH  +F H  +S+RE
Sbjct: 452 NMFNSKLWETSGHWQHYSENMFTFDIEKDT------FALKPMNCPGHCLMFAHRPRSWRE 505

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           +PVRLA+FG ++RNE SG+L GL RVR F QDDAH+FCT EQ+  E       + S+Y  
Sbjct: 506 MPVRLADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCTVEQIEEEIKGCLQFLQSVYST 565

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF   +  LSTRPE  +G   LWD+AE  ++  L       +      +  G+GAFYGP
Sbjct: 566 FGFSFQLN-LSTRPENFLGEVELWDEAEKQLQNSLVEFGKPWK------MNPGDGAFYGP 618

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  +KDAIGR  QC TIQ+DF LP RFN  Y +   +K +PV+IHRA+ GS+ER I I
Sbjct: 619 KIDIKIKDAIGRYHQCATIQLDFQLPIRFNLTYFDDGDDKRNPVIIHRAILGSVERMIAI 678

Query: 538 MIENFKGNL 546
           + EN+ G  
Sbjct: 679 LSENYGGKW 687


>gi|148671336|gb|EDL03283.1| threonyl-tRNA synthetase, isoform CRA_a [Mus musculus]
          Length = 544

 Score =  492 bits (1267), Expect = e-137,   Method: Composition-based stats.
 Identities = 197/521 (37%), Positives = 296/521 (56%), Gaps = 19/521 (3%)

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
            ++II     F +  +  E   E+F+     +K  IL         T+YR G   DLCRG
Sbjct: 27  CKKIIKEKQTFERLEVKKETLLEMFKY--NKFKCRILNEKVNTPTTTVYRCGPLIDLCRG 84

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHVR TG++K   K+ K +  YW G ++   L RIYG ++   + L ++  F EE++ RD
Sbjct: 85  PHVRHTGKIKTL-KIHKNSSTYWEGKADMETLQRIYGISFPDPKLLKEWEKFQEEAKNRD 143

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHL 304
           HRK+ R+ +L+   E   G  F+  KG  I+ TL+ ++R + +   ++E+ TP + +  L
Sbjct: 144 HRKIGRDQELYFFHELSPGSCFFLPKGAYIYNTLMEFIRSEYRKRGFQEVVTPNIFNSRL 203

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W  SGHW  Y  NMF+ +       +   FALKPMNCPGH  +F+H  +S+RELP+RLA+
Sbjct: 204 WMTSGHWQHYSENMFSFEV------EKEQFALKPMNCPGHCLMFDHRPRSWRELPLRLAD 257

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E     + + ++Y  FGF   +
Sbjct: 258 FGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSVFGFSFKL 317

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
             LSTRPEK +G   +W+ AE  ++  L+      +      +  G+GAFYGPK +  +K
Sbjct: 318 N-LSTRPEKFLGDIEIWNQAEKQLENSLNEFGEKWE------LNPGDGAFYGPKIDIQIK 370

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIGIMIENFK 543
           DAIGR  QC TIQ+DF LP RFN  YV+    +K  PV++HRA+ GS+ER I I+ EN+ 
Sbjct: 371 DAIGRYHQCATIQLDFQLPIRFNLTYVSHDGDDKKRPVIVHRAILGSVERMIAILTENYG 430

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIREHSIKK 602
           G  P WLSP Q +V  +  +  EYAQ++           +TD     T+N KIR   + +
Sbjct: 431 GKWPFWLSPRQVMVVPVGPTCDEYAQKVRQQFHDAKFMADTDLDPGCTLNKKIRNAQLAQ 490

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              I++ G+KE +  ++ IR   +    + ++ + +  L +
Sbjct: 491 YNFILVVGEKEKASGTVNIRTRDNKVHGERTVEETVRRLQQ 531


>gi|330685703|gb|EGG97342.1| threonine--tRNA ligase [Staphylococcus epidermidis VCU121]
          Length = 523

 Score =  492 bits (1266), Expect = e-137,   Method: Composition-based stats.
 Identities = 206/528 (39%), Positives = 318/528 (60%), Gaps = 20/528 (3%)

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K  ++I+  +    ++ ++ ++A+  F+   + YK+E++++IP  ENVTLY QGE+ DLC
Sbjct: 2   KNNEKIVDENHKIERKVVTRDEAKAFFK--DDPYKLELIDAIPEDENVTLYSQGEFTDLC 59

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RG HV ST ++K+F KL+  AGAYWRGDSN  ML RIYGTA+  +++L  +L  LEE ++
Sbjct: 60  RGVHVPSTSKIKEF-KLLSTAGAYWRGDSNNKMLQRIYGTAFFDKKDLKAHLEMLEERKE 118

Query: 244 RDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLD 301
           RDHRK+ ++++LF +    G+G+  W   G  I + +  Y+  +++   Y+ + TP + +
Sbjct: 119 RDHRKIGKDLELFANSQLVGAGLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLAN 178

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             L++ SGHWD Y+ +MF     D+T        L+PMNCP H+ V+N+   SYRELP+R
Sbjct: 179 VDLYKTSGHWDHYQEDMFPPMKLDET----EEMVLRPMNCPHHMMVYNNKPHSYRELPIR 234

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AE G+++R E SG++ GL RVRG T +D+H+F   +Q+  E  ++ N+I  +YKDFGFE
Sbjct: 235 IAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVNMIQDVYKDFGFE 294

Query: 422 KIMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
               +LS R      K    D +W+ AEN++K   D +  S ++ I      GE AFYGP
Sbjct: 295 DYRFRLSYRDPEDKEKYFDDDEMWNKAENMIKEAADELGLSYEEAI------GEAAFYGP 348

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  +K A+G++    T Q+DF LP RF   Y+    E   PV+IHR V  ++ERF+  
Sbjct: 349 KLDVQVKTAMGKEETLSTAQLDFLLPERFELTYIGQDGEHHRPVVIHRGVVSTMERFVAF 408

Query: 538 MIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           + E  KG  P WL+P Q  +  +      +YA+ I + LKS  + +E D RNE + YKIR
Sbjct: 409 LTEETKGAFPTWLAPKQVEIIPVNLDLHYDYAKSIQDELKSQGVRVEIDDRNEKMGYKIR 468

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           E  ++KIP  I+ GDKE     + +R++GS   + +   + I  L  E
Sbjct: 469 EAQMQKIPYQIVVGDKEVENNEVNVRKYGSQDQETLEKDEFIWNLVDE 516


>gi|116515019|ref|YP_802648.1| hypothetical protein BCc_078 [Buchnera aphidicola str. Cc (Cinara
           cedri)]
 gi|116256873|gb|ABJ90555.1| threonyl-tRNA synthetase [Buchnera aphidicola str. Cc (Cinara
           cedri)]
          Length = 642

 Score =  491 bits (1265), Expect = e-136,   Method: Composition-based stats.
 Identities = 231/640 (36%), Positives = 379/640 (59%), Gaps = 16/640 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +   +G  K +        + +    +     +A  IN ++ DL+  V    +IE+I   
Sbjct: 2   IILCNGIKKIYAKPTILKILLQDFYPNHNSCFIAGFINNQLSDLNTLVSHNSTIELIDEN 61

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           +   L ++R+SC  ++   ++ IWP +++A G I E GFY DFD     +  +  +I + 
Sbjct: 62  NKNFLYMLRYSCMQLLNYTLKIIWPNIKIAGGNITESGFYCDFDMPHILTKKDFNKISQN 121

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIP-AKENVTLYRQGEWFDLCR 184
           M + I        + ++ +K  ++ + +KE Y++EIL+      + + +    ++++L  
Sbjct: 122 MLKKIFSSYNIFFKKITKKKILDILKKRKEIYQIEILKKFFFDTDIINICYHEKYYELSV 181

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
            P + +    K F  L  V+GAYW  + N  ML RI+  +W ++++L ++L   E+ +  
Sbjct: 182 HPQLSNISFCKHF-LLNNVSGAYWNNNKNNKMLQRIHVISWISRKQLLEFLKKKEKLKLC 240

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQH 303
           DHRK+++ + L+HI ++  G+IFWH+ G+ IF+ L +++R K+ +++Y E+ +P ++D+ 
Sbjct: 241 DHRKISKLLSLYHIQKESPGMIFWHKNGYIIFKQLENFLRNKLFQNNYIEVKSPIIIDKS 300

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SGHW  Y  ++F  K  ++       + +KPMNCP HV +F +GLKSY++LP+R+A
Sbjct: 301 LWKKSGHWKHYNQSIFTTKSENN------QYCIKPMNCPAHVQIFKYGLKSYKDLPIRMA 354

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +R E SGSLHGL RVRGFTQDDAH+FCTK+Q+ +E      L+  +Y  FGF+KI
Sbjct: 355 EFGSCHRQETSGSLHGLFRVRGFTQDDAHIFCTKKQIKSELNHCIRLLFDLYHTFGFKKI 414

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            +K STRPE R+G D +WD AE  ++ VL       ++ +     +GEGAFYGPK E  L
Sbjct: 415 FIKFSTRPENRIGKDDIWDQAEKDLELVLK------KNNLFFEYQIGEGAFYGPKIEIAL 468

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           +D + R WQCGTIQ+DF L  + +AFY+N ++ K +P++IHRA  GSIERFIGI+IE + 
Sbjct: 469 EDNLKRIWQCGTIQLDFYLSKQLDAFYINKNNIKKNPIIIHRAFLGSIERFIGILIEEYN 528

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G LP+WL PIQ  +  ++   + + + I      +++   +D  N +I++KIR +  +K+
Sbjct: 529 GKLPIWLCPIQVAIINVSEKHIFFIKNIEKKFLKNNIRFISDISNNSISFKIRFYLEQKV 588

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           P III GDKE     I IR   +    K ++   I  +  
Sbjct: 589 PYIIIIGDKEVKNNYITIRNRFNNIQYKQNINFFIKKIIN 628


>gi|269860011|ref|XP_002649729.1| threonyl-tRNA synthetase [Enterocytozoon bieneusi H348]
 gi|263511674|sp|B7XIA1|SYTC_ENTBH RecName: Full=Probable threonyl-tRNA synthetase, cytoplasmic;
           AltName: Full=Threonine--tRNA ligase; Short=ThrRS
 gi|220066924|gb|EED44394.1| threonyl-tRNA synthetase [Enterocytozoon bieneusi H348]
          Length = 634

 Score =  491 bits (1263), Expect = e-136,   Method: Composition-based stats.
 Identities = 214/629 (34%), Positives = 353/629 (56%), Gaps = 30/629 (4%)

Query: 21  ATGSDVAESISRSLA-KKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIRHSCA 78
           ++G+ + E IS     K  +A AI+G + D++  + E   IE+   +      V  HS A
Sbjct: 17  SSGTILQELISTHYPNKNIIACAIDGIMADINTEINENQKIELYDFDSKEGQHVYWHSSA 76

Query: 79  HIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLK 138
           HI+  A+ +++ + ++  GP +++GFYYD D E+P   ++ A IEK+MQ II ++  F K
Sbjct: 77  HILGNALVNLY-QCKLVNGPALDEGFYYDIDIERPIREEDFADIEKEMQRIINKNIDFRK 135

Query: 139 QYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFF 198
           + +  +   ++++     YKV  + +IP    +++Y   E++D+C+GPH++STG VK F 
Sbjct: 136 KMIKKDDLLKMYKDND--YKVHFINNIPDN-LISVYYNDEFYDMCQGPHIQSTGLVKAF- 191

Query: 199 KLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI 258
           K++K +  Y+   ++  +L RIYG ++  +  L +Y   ++++++ DHRK+ +E++L+  
Sbjct: 192 KILKSSSCYFLNSADNQILQRIYGISFPNKTLLKEYEEKVQKAKEMDHRKIGKELNLYFF 251

Query: 259 AEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRAN 317
            E   G  FW   G  I+  L+ ++R++  K  ++E+ TP +    LW++SGH+ +Y+ N
Sbjct: 252 HEYSPGSCFWLPDGVVIYNRLMEFLRKEYIKRGFKEVITPNIFHIDLWKESGHYQNYKEN 311

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           ++ +            FALKPMNCPGH  +F    +SY+ELP+R A+FG ++RNE SGSL
Sbjct: 312 IYGI--------SGEDFALKPMNCPGHCIIFKSVERSYKELPLRYADFGVLHRNECSGSL 363

Query: 378 HGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGS 437
            GL RVR F QDDAH+F +K  +  E       + ++Y  F F+  +  LSTRP K +G+
Sbjct: 364 TGLTRVRRFQQDDAHIFTSKSSIKEEIENAIGFLKTVYSIFNFKYEL-FLSTRPTKFLGT 422

Query: 438 DALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ 497
              WD AE  +K  +    ++        +  G+GAFYGPK + IL D + R  QC TIQ
Sbjct: 423 IEEWDVAEKSLKDAIIDSGHT------YTLNEGDGAFYGPKIDIILHDILNRKIQCATIQ 476

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIV 557
           +DF LP RF+  + N       PV+IHRA+ GS ERFI I+IE++  +LP WL P Q  +
Sbjct: 477 LDFQLPQRFDLKFKNELGMYETPVIIHRAILGSFERFIAILIESYGKHLPFWLHPRQVGL 536

Query: 558 TTITSSAVEYAQEIANLL----KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
            TI      Y   +   +        +   TD ++ T+N KIR+ ++    II I GDKE
Sbjct: 537 VTIDCKHENYMYTVEKSMLNVVLDLGIRKYTDPKD-TLNKKIRKATLDGCKIICILGDKE 595

Query: 614 ASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             +  + +R      T+   + + +  + 
Sbjct: 596 MEKNEVNVRI--GNKTRTYKIEELLEKIK 622


>gi|260662523|ref|ZP_05863418.1| threonyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN]
 gi|260553214|gb|EEX26157.1| threonyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN]
          Length = 627

 Score =  490 bits (1261), Expect = e-136,   Method: Composition-based stats.
 Identities = 193/596 (32%), Positives = 326/596 (54%), Gaps = 21/596 (3%)

Query: 54  VREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-Q 112
           +  G++E +  E   SL  +R   A ++   +Q  +  +++      ED F+ D DK+ Q
Sbjct: 34  LPNGTVEKVDRESKESLDALRQVAALLLKAVLQDQFKGIRLGEAVAEEDQFFVDSDKDNQ 93

Query: 113 PFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVT 172
             S+DEL  +E+ ++++   +       +S + A +  E   + +  E+L+       V+
Sbjct: 94  QVSADELEGLERAVKKLAKENLKIELVKVSVDDAVKAVE--GDQFSSELLKENAEDGQVS 151

Query: 173 LYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELT 232
           LY+ G+   L + P +     + K  KL+ VAGAYW+G S+ PML RIYGT +  +++L 
Sbjct: 152 LYKMGDATILAQAP-IMLYANLVKNVKLLSVAGAYWKGMSSNPMLQRIYGTVFFKKEDLE 210

Query: 233 QYLYFLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISY-MRRKIKDD 290
             L   +E+ +RDHR +  ++DLF +      G+ +W  KG  I +T+  Y + +++ D 
Sbjct: 211 ADLKARQEARERDHRVIGNQLDLFFVDPKVGAGLPYWMPKGSTIRRTIERYVIDKEVGDG 270

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH 350
           YE + TP +++   ++ SGHWD YR +MF          D     L+PMNCP H+ ++ H
Sbjct: 271 YEHVYTPVLMNLDAYKTSGHWDHYREDMFPPMDMG----DGELLELRPMNCPSHIQIYKH 326

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
            ++SYRELP+R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  KI  L
Sbjct: 327 HIRSYRELPLRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQIQDEFAKILKL 386

Query: 411 IISIYKDFGFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           I+ +YKDF       +LS R  K       +D +W+ +++++K  +D++       ++  
Sbjct: 387 IMDVYKDFNINDYTFRLSYRDPKNTEKYFANDEMWERSQSMLKAAMDSMG------LDYY 440

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
              GE AFYGPK +   K A+G D    TIQ+DF LP +F+  YV    ++  PVMIHR 
Sbjct: 441 EAEGEAAFYGPKLDIQTKTALGNDETMSTIQLDFMLPEKFDLHYVGEDGKQHRPVMIHRG 500

Query: 527 VFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETD 585
           V G++ERF+  + E +KG  P WL+P Q  +  ++     +YA ++A   ++  L    D
Sbjct: 501 VVGTMERFVAYLTEIYKGAFPTWLAPNQVNIIPVSDEKHGDYADDLAREFRAAQLRTVVD 560

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            R+E + YKIRE   +K+P  ++ G+ E +  ++ +R++G      +S  D + ++
Sbjct: 561 HRSEKMGYKIRESQTQKVPYTLVVGEDEVANGTVSVRKYGEKDQVSMSKQDFLDLI 616


>gi|307103976|gb|EFN52232.1| hypothetical protein CHLNCDRAFT_49107 [Chlorella variabilis]
          Length = 570

 Score =  490 bits (1260), Expect = e-136,   Method: Composition-based stats.
 Identities = 204/624 (32%), Positives = 313/624 (50%), Gaps = 82/624 (13%)

Query: 24  SDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMA 82
            +VA  IS+ LAKK V   ++G V DL  P+  + ++++++ ED     V +        
Sbjct: 1   MEVANQISKGLAKKCVVAKVDGCVWDLLRPLEGDCALQLLSFEDAEGKEVAQKRAGQAEF 60

Query: 83  EAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLS 142
            A        Q AIGP    GF Y                    +E I     F +  +S
Sbjct: 61  GA--------QPAIGPRSGRGFLYGLLLGD--------------KETIKERQVFERVVVS 98

Query: 143 HEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMK 202
            E+A  +FE     +KVEI+  +PA   ++LY+ G   DLC GPHV +TG +K       
Sbjct: 99  REEALSMFEE--NKFKVEIISDLPADAVISLYKVGPMVDLCHGPHVPNTGLLKA------ 150

Query: 203 VAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDG 262
                 R D NR  L R+Y   +  ++EL +Y + +EE++KRDHR +             
Sbjct: 151 ------RADVNREPLQRVYAITFPDEKELKEYQHRMEEAKKRDHRNV------------- 191

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
                              +MR+K  +  YEE+ TP + +  LW+ SGH D YR NMF  
Sbjct: 192 ------------------DFMRQKYWEYGYEEVVTPNIFNFDLWKVSGHADHYRENMFLF 233

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
                   +   + LKPMNCPGH  +F +  +SYRELP+RLA+FG ++RNE SG+L GL 
Sbjct: 234 SV------EKAEWGLKPMNCPGHCLMFANRNRSYRELPLRLADFGVLHRNEFSGALQGLT 287

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALW 441
           RVR F QDDAH+FC ++Q+  E      ++  +Y  FG +  M  LSTRPE  +G   +W
Sbjct: 288 RVRRFQQDDAHIFCRQDQVKAEISSYLKMMGEVYDAFGLDYKMA-LSTRPEGYLGELEVW 346

Query: 442 DDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFN 501
           + AE  ++  L+             +  G+GAFYGPK +  + DA+ R +QC T+Q+DF 
Sbjct: 347 NQAEAALEEALNATGR------EWEMNPGDGAFYGPKIDITVFDALRRKYQCATVQLDFQ 400

Query: 502 LPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT 561
            P RFN  YV     +  PV++HRA+ GS ER   I+ E++ G  PLW+SP Q ++  I+
Sbjct: 401 FPIRFNLEYVAEDGSRQRPVIVHRAILGSAERMFAILTEHWGGKWPLWISPRQVMIVPIS 460

Query: 562 SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
            +  +YA  +   L+S    ++ D  +  +  K+RE  + +   I++ G++E    ++ +
Sbjct: 461 EAVYDYASAVRRQLRSAGFHVDADMADRKMQKKVREAQLSQYNYILVVGEEERVAGTVNV 520

Query: 622 RRFGSTTTQKVSLLDAIPILTKES 645
           R   +      SL   I ++++E 
Sbjct: 521 RTRDNQVHGMHSLAGVIDVMSRER 544


>gi|296203929|ref|XP_002749128.1| PREDICTED: probable threonyl-tRNA synthetase 2, cytoplasmic-like
           [Callithrix jacchus]
          Length = 726

 Score =  489 bits (1259), Expect = e-136,   Method: Composition-based stats.
 Identities = 201/535 (37%), Positives = 299/535 (55%), Gaps = 19/535 (3%)

Query: 112 QPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENV 171
           +  SS EL+ +E   + II    PF +  +S E   E+F+     +K  IL    +    
Sbjct: 195 RAVSSTELSALENICKVIIKEKQPFERLEVSKEILLEMFKY--NKFKCRILNEKVSTATT 252

Query: 172 TLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQEL 231
           T+YR G   DLC+GPHVR TG++K   K+ K +  YW G+     L RIYG ++   + +
Sbjct: 253 TVYRCGPLIDLCKGPHVRHTGKIKTI-KIFKNSSTYWEGNPEMETLQRIYGISFPDNKMM 311

Query: 232 TQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DD 290
             +  F EE++ RDHRK+ +E +LF   +   G  F+  +G  I+ TL+ ++R +    D
Sbjct: 312 RNWEKFQEEAKNRDHRKIGKEQELFFFHDLSPGSCFFLPRGAFIYNTLVDFIREEYHKRD 371

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH 350
           + E+ +P + +  LW+ SGHW  Y  NMF  +   DT      FALKPMNCPGH  +F H
Sbjct: 372 FTEVLSPNMFNSKLWEASGHWQHYSENMFTFEIEKDT------FALKPMNCPGHCLMFAH 425

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
             +S+RE+P+R A+FG ++RNE SG+L GL RVR F QDDAH+FCT EQ+  E       
Sbjct: 426 RPRSWREMPIRFADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCTVEQIEEEIKGCLQF 485

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
           + S+Y  FGF   +  LSTRPE  +G   +W++AE  ++  L       +      +  G
Sbjct: 486 LQSVYSTFGFSFQLN-LSTRPENFLGEIEMWNEAEKQLQNSLMEFGEPWK------MNPG 538

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFG 529
           +GAFYGPK +  +KDAIGR  QC TIQ+DF LP RFN  YV+    +K  PV+IHRA+ G
Sbjct: 539 DGAFYGPKIDIKIKDAIGRYHQCATIQLDFQLPIRFNLTYVSKDGDDKKRPVIIHRAILG 598

Query: 530 SIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FRN 588
           S+ER I I+ EN+ G  P WLSP Q +V  +  +  +YA ++++         + D   +
Sbjct: 599 SVERMIAILSENYGGKWPFWLSPRQVMVIPVGPTCEKYALQVSSEFFEEGFMADIDLDHS 658

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            T+N KIR   + +   I++ G+KE    ++ +R   +    ++ +  AI  L  
Sbjct: 659 CTLNKKIRNAQLAQYNFILVVGEKEKINNAVNVRTRDNRIHGEILVTSAIDKLKN 713


>gi|302783999|ref|XP_002973772.1| hypothetical protein SELMODRAFT_442211 [Selaginella moellendorffii]
 gi|300158810|gb|EFJ25432.1| hypothetical protein SELMODRAFT_442211 [Selaginella moellendorffii]
          Length = 795

 Score =  489 bits (1259), Expect = e-136,   Method: Composition-based stats.
 Identities = 231/583 (39%), Positives = 341/583 (58%), Gaps = 49/583 (8%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSD 117
            I + T E    L  +RH+CAH+MA AVQ+++P+ +V IGP IE GFYYDFD ++P S  
Sbjct: 71  KIPLPTNESCEELLRMRHTCAHVMAMAVQTLYPDAKVTIGPWIEKGFYYDFDLKEPLSDK 130

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +L +I+K+M  II R+ P  ++ +S E+A++   S  E YK+EILE I   E +T+Y  G
Sbjct: 131 DLKKIKKEMDRIIGRNLPLRREEVSREEAKDRIMSINEKYKLEILEDIK-TEPITIYHIG 189

Query: 178 -EWFDLCRGPHVRSTGQ-VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
            +W+DLC GPHV  TGQ  +K  +L  VAGAYWRGD  R ML RIYGTAW T+++L  Y 
Sbjct: 190 NDWWDLCAGPHVERTGQLNRKAIELESVAGAYWRGDVKRQMLQRIYGTAWQTEEQLKAYQ 249

Query: 236 YFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEE 293
              EE+++RDHR+L ++++LF I ED G G++FWH KG  I   +  Y ++  ++  YE 
Sbjct: 250 TQKEEAKRRDHRRLGQDLELFSIQEDAGGGLVFWHPKGALIRHLIEDYWKKVHLRRGYEL 309

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           + TP V    LW+ SGH D Y+ NMF     +    +   + L+PMNCP H+ ++   ++
Sbjct: 310 LYTPHVAKAELWKTSGHLDFYKENMF-----EQIKIEEEFYQLRPMNCPFHIQIYKDRVR 364

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYRELP++ AE                                 EQ+  E   + +L   
Sbjct: 365 SYRELPIKFAEL--------------------------------EQIRGEIKSVLDLTEE 392

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           I   FGF+   + LST+PEK VGSD +W  A   +K  +      S      G+  G GA
Sbjct: 393 ILSQFGFQNYEINLSTKPEKAVGSDDIWHKATEALKDAI------SDKGWTYGIDEGGGA 446

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  ++DAIGR WQC TIQVDFNLP RF+  YV+    +  P+MIHRA+FGSIER
Sbjct: 447 FYGPKIDLKIEDAIGRTWQCSTIQVDFNLPERFDLTYVDPSQARKQPIMIHRAIFGSIER 506

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           F+GI+IE++ G+ PLW++P+QA +  +T + + Y +++   L+   +  E     E ++ 
Sbjct: 507 FVGILIESYAGDFPLWIAPVQARLLPVTDTELPYCKQVLARLREKDIRAEI-ACGERLSK 565

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
            IR   ++KIP++ + G KE   +++ +R         +S+ +
Sbjct: 566 LIRNAEVQKIPLMAVVGPKEVEAQTLTVRTRHGGELGTLSVDE 608


>gi|307103531|gb|EFN51790.1| hypothetical protein CHLNCDRAFT_56367 [Chlorella variabilis]
          Length = 594

 Score =  489 bits (1258), Expect = e-136,   Method: Composition-based stats.
 Identities = 243/611 (39%), Positives = 344/611 (56%), Gaps = 62/611 (10%)

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           + T E+   L  IRHSCAHIMA AVQ +    QV IGP  + GF+YDFD  QP +  +L 
Sbjct: 13  LPTSEESEDLLRIRHSCAHIMAMAVQRLHKGAQVTIGPWTDRGFFYDFDMPQPLTERDLP 72

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN---VTLYRQG 177
           +I K+MQ I+ ++ PF++     E A        E YK+EIL+SI  ++    +T+Y  G
Sbjct: 73  KIRKEMQRILKKNLPFVR-----EDAA------GEPYKLEILDSILERDPQAPITIYHIG 121

Query: 178 ------EWFDLCRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQE 230
                  W+DLC GPHV +TG +      L  VAGAYWRGD  RPML RIYGTAW T+++
Sbjct: 122 TPGSEDHWWDLCAGPHVAATGDILPDALDLESVAGAYWRGDETRPMLQRIYGTAWQTKEQ 181

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRR-KIK 288
           L  Y  F EE+  RDHR+L +E+DLF I E  G G++FWH KG  +   +  + +   ++
Sbjct: 182 LIAYHRFNEEAALRDHRRLGQELDLFSINEACGGGLVFWHPKGAMVRHLVEDFWKSIHLQ 241

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
             Y  + TP +    LW+ SGH+D YR +MF                LKPMNCP H+ ++
Sbjct: 242 YGYHLLFTPHIAKVDLWKTSGHFDFYRDSMFNQMD------------LKPMNCPFHITIY 289

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
             G  SYR+LP++ AE G+VYR E SG++HGL R      DDAH+FC   Q+  E L + 
Sbjct: 290 KQGYYSYRDLPIKWAELGTVYRYERSGTMHGLFR------DDAHIFCLPTQIEAEILGVL 343

Query: 409 NLIISIYKDFGFEKI--------------MVKLSTRPEKRVGSDALWDDAENIMKGVLDT 454
           +L   +   FGF                  V LSTRP+K VGS  +WD AE+ +K  L  
Sbjct: 344 DLTELLLSQFGFHDFEASCKRKPPPRPCLQVNLSTRPDKFVGSPEIWDQAEHALKAALQ- 402

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH 514
                +        +G GAFYGPK +  + DAIGR WQC T+Q+DFNLP RF+ FY++  
Sbjct: 403 -----RKGWAFAEDVGGGAFYGPKIDIKICDAIGRKWQCSTVQLDFNLPERFDMFYISDA 457

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANL 574
           + K  P+MIHRA+ GS+ERF+GI+IEN+ G  PLWL+P+Q  +  +  + + Y   +A  
Sbjct: 458 NIKERPIMIHRAILGSLERFMGILIENYAGAFPLWLAPVQCRLVPVNDAVMGYVSGVAQA 517

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           L++  L +E      ++   IR     KIP++ + G +EAS  ++ +R +       + +
Sbjct: 518 LQAAGLRVEV-SSGLSVGKAIRAAEKDKIPVMCVVGQREASAGTVAVRTYSHGDVGCMLV 576

Query: 635 LDAIPILTKES 645
            D +  + K S
Sbjct: 577 EDLVERMAKAS 587


>gi|167536887|ref|XP_001750114.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163771443|gb|EDQ85110.1| predicted protein [Monosiga brevicollis MX1]
          Length = 550

 Score =  488 bits (1257), Expect = e-135,   Method: Composition-based stats.
 Identities = 183/589 (31%), Positives = 301/589 (51%), Gaps = 44/589 (7%)

Query: 50  LSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF 108
           ++ P+  + +++ +  +D        HS AHI+  A++  +    +  GP I+DGF+YD 
Sbjct: 1   MTRPLEEDCTLQFLKFDDEEGRDTFWHSSAHILGLAMEHYFGG-NLCYGPPIKDGFFYDM 59

Query: 109 -DKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPA 167
              ++  S ++   +E    +      PF +  +S E    +F+     +K  +++    
Sbjct: 60  EMGDRHVSEEDFKTLESLATKATKAKYPFQRLIVSKENLLRMFQE--NPFKQRLIKERIQ 117

Query: 168 KENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNT 227
           +   T+YR G   DLC GPH+R+TGQ+K F+ + K +  YW G ++   L R+Y  ++  
Sbjct: 118 EAATTVYRCGPLIDLCHGPHIRNTGQIKAFW-VHKCSSTYWEGKADAETLQRVYAVSFPD 176

Query: 228 QQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI 287
           ++ L  +   L E+ KRDHRK+ RE +LF   +   G  F+  +G +I++TL+  +R + 
Sbjct: 177 KKMLKDHKELLAEAAKRDHRKIGREQELFFFHDLSPGSCFFLPRGARIYRTLMEMIREQY 236

Query: 288 -KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA 346
            K  + E+ TP + +++LW+ SGHW  Y+ N+F+ +       +   FA+KPMNCP H  
Sbjct: 237 IKRGFSEVVTPNIFNKNLWETSGHWQHYQENIFSFEV------EKEIFAMKPMNCPSHCI 290

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           +F H  +SYRELP+R A+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+  E   
Sbjct: 291 MFGHRKRSYRELPLRFADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCEPEQIEEEIKG 350

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
             + +  +Y  FGFE  +  LSTRPEK +G   +W+ AE+ ++  L++  +         
Sbjct: 351 CLDFLNEVYGIFGFEFELH-LSTRPEKYLGEIEVWNRAESALESALNSCGHPW------S 403

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
           +  G+GAFYGPK +  + DA+ R  Q   +                            R 
Sbjct: 404 INPGDGAFYGPKIDIKVTDALRRQHQVRPLCCSGE-----------------------RD 440

Query: 527 VFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF 586
           ++ S  R   I+ E+  G  P WLSP QAIV  +     EYA+E+         +I+ D 
Sbjct: 441 LWASPLRMFAILCEHTGGKWPFWLSPRQAIVIPVAPQYNEYAKEVQAFFHLKDYAIDIDD 500

Query: 587 RNET-INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
              T +  K+R   +     I + GD EA+ +++ +R         + L
Sbjct: 501 STATQLQKKVRNACVAHYNFIFVVGDSEANHKTVNVRTRDGQLRGTLGL 549


>gi|227529941|ref|ZP_03959990.1| threonine--tRNA ligase [Lactobacillus vaginalis ATCC 49540]
 gi|227350126|gb|EEJ40417.1| threonine--tRNA ligase [Lactobacillus vaginalis ATCC 49540]
          Length = 601

 Score =  485 bits (1249), Expect = e-135,   Method: Composition-based stats.
 Identities = 195/597 (32%), Positives = 322/597 (53%), Gaps = 21/597 (3%)

Query: 56  EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPF 114
           +GS++ I  +    L  +R   A ++  A++  +  +++      EDGF+ D DK+ Q  
Sbjct: 10  DGSVKKIDRDSKEGLQALRKLSALMLKVALKQEFKGIRLGEAVADEDGFHVDSDKDNQQV 69

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
           S+DEL  +E  ++ +   D+      +  E A    E+  + +  E+++       V +Y
Sbjct: 70  SADELPALEDVIKGMAKNDAKVEFVEVPVEDALTEVEA--DRFSSELIKESAKDGKVAMY 127

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
           + G+         +   G V K  +L+ VAGAYW+G S+ PML RIYGT +  +  L + 
Sbjct: 128 QLGD-VKAVADDDILLYGDVVKNLRLLSVAGAYWKGMSSNPMLQRIYGTVFYKKDALEED 186

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYE 292
           L   +E+++RDHR +  ++DLF +      G+ +W  KG  I +T+  Y+  R++ D Y+
Sbjct: 187 LKKRQEAKERDHRVIGNQLDLFFVDPKVGAGLPYWMPKGATIRRTIERYIIDREVADGYK 246

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
            + TP +++   ++ SGHW+ YR +MF          D     L+PMNCP H+ ++ H +
Sbjct: 247 HVYTPVLMNLDAYKTSGHWEHYRDDMFPPMDMG----DGEMLELRPMNCPSHIQIYKHHI 302

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
           +SYR+LP+R+AE G ++R E SG+L GL RVR  T +D H F T +Q+ +E  KI  LI+
Sbjct: 303 RSYRDLPLRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVTLDQIRSEFAKILRLIM 362

Query: 413 SIYKDFGFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
            +YKDF       +LS R  K       +D +W+ +++++K  +D +       ++    
Sbjct: 363 DVYKDFDITDYSFRLSLRDPKNVKKYYANDEMWEKSQSMLKKAMDDLN------LDYYEA 416

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
            GE AFYGPK +   K A+G D    TIQ+DF LP RF   YV    ++  PVMIHR V 
Sbjct: 417 EGEAAFYGPKLDIQTKTALGNDETMSTIQLDFMLPERFGLTYVGQDGKEHQPVMIHRGVV 476

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFR 587
           G++ERFI  + E +KG  P WL+P Q  +  +      EYA E+A  +K+ ++ +  D R
Sbjct: 477 GTMERFIAYLTEIYKGAFPTWLAPEQVHIIPVNEDAHGEYADELAKKMKAANIRVVVDHR 536

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           NE + YKIRE   +K+P  ++ GD E +   + +R++G     ++S    +  +  +
Sbjct: 537 NEKMGYKIRESQTQKVPYTLVVGDDEKANNGVSVRKYGEKEQNEMSQDAFMNEILAD 593


>gi|148545068|ref|YP_001272438.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Lactobacillus
           reuteri DSM 20016]
 gi|148532102|gb|ABQ84101.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Lactobacillus
           reuteri DSM 20016]
          Length = 601

 Score =  485 bits (1248), Expect = e-134,   Method: Composition-based stats.
 Identities = 195/597 (32%), Positives = 323/597 (54%), Gaps = 21/597 (3%)

Query: 56  EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPF 114
           +GS++ I  +    L  +R   A ++  A++  +  +++      EDGF+ D DK+ Q  
Sbjct: 10  DGSVKKIDRDSQEGLEALRKLSALMLKAALKQEFKGIRLGEAVADEDGFHVDSDKDNQQV 69

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
           S+DEL  +E  ++ +   D       +  E+A    E K + +  E++        V +Y
Sbjct: 70  SADELPALEDVIKGMAKNDVKVEFVEVPVEEALA--EVKDDRFSTELINENAKDGKVAMY 127

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
           + G+         +   G V K  +L+ VAGAYW+G S+ PML RIYGT +  +  L + 
Sbjct: 128 QLGD-VKAVADDDILLYGNVVKNLRLLSVAGAYWKGMSSNPMLQRIYGTVFYKKDALEED 186

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYE 292
           L   +E+++RDHR +  ++DLF +      G+ +W  KG  I +T+  Y+  R++ D Y+
Sbjct: 187 LKKRQEAKERDHRVIGNQLDLFFVDPKVGAGLPYWLPKGATIRRTIERYIIDREVADGYQ 246

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
            + TP +++   ++ SGHW+ YR +MF          D     L+PMNCP H+ V+ H +
Sbjct: 247 HVYTPVLMNLDAYKTSGHWEHYRDDMFPPMDMG----DGEMLELRPMNCPSHIQVYKHHI 302

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
           +SYR+LP+R+AE G ++R E SG+L GL RVR  T +D H F T +Q+ +E  KI  LI+
Sbjct: 303 RSYRDLPLRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVTLDQIRSEFAKILKLIM 362

Query: 413 SIYKDFGFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
           S+Y+DF       +LS R  K       +D +W+ +++++K  +D +       ++    
Sbjct: 363 SVYEDFDITDYSFRLSLRDPKNVKKYYANDEMWEKSQSMLKSAMDDLN------LDYYEA 416

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
            GE AFYGPK +   K A+G D    TIQ+DF LP RF   YV    ++  PVMIHR V 
Sbjct: 417 EGEAAFYGPKLDIQTKTALGNDETMSTIQLDFMLPERFGLSYVGQDGKEHQPVMIHRGVV 476

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFR 587
           G++ERF+  + E +KG  P WL+P Q  +  +      EYA ++A  +K+ ++ +  D R
Sbjct: 477 GTMERFMAYLTEIYKGAFPTWLAPEQVHIIPVNEEAHGEYADDLAKKMKAANIRVNVDHR 536

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           NE + YKIRE   +K+P  ++ GD E +   + +R++G     ++S    +  + ++
Sbjct: 537 NEKMGYKIREAQTQKVPYTLVVGDDEKNNNGVSVRKYGEKEQNEMSQEAFMNEILED 593


>gi|194467309|ref|ZP_03073296.1| threonyl-tRNA synthetase [Lactobacillus reuteri 100-23]
 gi|194454345|gb|EDX43242.1| threonyl-tRNA synthetase [Lactobacillus reuteri 100-23]
          Length = 601

 Score =  485 bits (1248), Expect = e-134,   Method: Composition-based stats.
 Identities = 195/597 (32%), Positives = 322/597 (53%), Gaps = 21/597 (3%)

Query: 56  EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPF 114
           +GS++ I  +    L  +R   A ++  A++  +  +++      EDGF+ D DK+ Q  
Sbjct: 10  DGSVKKIDRDSQEGLEALRKLSALMLKAALKQEFKGIRLGEAVADEDGFHVDSDKDNQQV 69

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
           S+DEL  +E  ++ +   D       +  E+A    E K + +  E++        V +Y
Sbjct: 70  SADELPALEDVIKGMAKNDVKVEFVEVPVEEALA--EVKDDRFSTELINENAKDGKVAMY 127

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
           + G+         +   G V K  +L+ VAGAYW+G S+ PML RIYGT +  +  L + 
Sbjct: 128 QLGD-VKAVADDDILLYGNVVKNLRLLSVAGAYWKGMSSNPMLQRIYGTVFYKKDALEED 186

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYE 292
           L   +E+++RDHR +  ++DLF +      G+ +W  KG  I +T+  Y+  R++ D Y+
Sbjct: 187 LKKRQEAKERDHRVIGNQLDLFFVDPKVGAGLPYWLPKGATIRRTIERYIIDREVADGYQ 246

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
            + TP +++   ++ SGHW+ YR +MF          D     L+PMNCP H+ V+ H +
Sbjct: 247 HVYTPVLMNLDAYKTSGHWEHYRDDMFPPMDMG----DGEMLELRPMNCPSHIQVYKHHI 302

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
           +SYR+LP+R+AE G ++R E SG+L GL RVR  T +D H F T +Q+ +E  KI  LI+
Sbjct: 303 RSYRDLPLRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVTLDQIRSEFAKILKLIM 362

Query: 413 SIYKDFGFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
           S+Y+DF       +LS R  K       +D +W+ +++++K  +D +       ++    
Sbjct: 363 SVYEDFDITDYSFRLSLRDPKNVKKYYANDEMWEKSQSMLKSAMDDLN------LDYYEA 416

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
            GE AFYGPK +   K A+G D    TIQ+DF LP RF   YV    ++  PVMIHR V 
Sbjct: 417 EGEAAFYGPKLDIQTKTALGNDETMSTIQLDFMLPERFGLSYVGQDGKEHQPVMIHRGVV 476

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFR 587
           G++ERF+  + E +KG  P WL+P Q  +  +      EYA  +A  +K+ ++ +  D R
Sbjct: 477 GTMERFMAYLTEIYKGAFPTWLAPEQVHIIPVNEEAHGEYADNLAKKMKAANIRVNVDHR 536

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           NE + YKIRE   +K+P  ++ GD E +   + +R++G     ++S    +  + ++
Sbjct: 537 NEKMGYKIREAQTQKVPYTLVVGDDEKNNNGVSVRKYGEKEQNEMSQEAFMNEILED 593


>gi|184154400|ref|YP_001842741.1| threonyl-tRNA synthase [Lactobacillus reuteri JCM 1112]
 gi|227364219|ref|ZP_03848315.1| threonine--tRNA ligase [Lactobacillus reuteri MM2-3]
 gi|325683422|ref|ZP_08162938.1| threonine--tRNA ligase [Lactobacillus reuteri MM4-1A]
 gi|183225744|dbj|BAG26261.1| threonyl-tRNA synthase [Lactobacillus reuteri JCM 1112]
 gi|227070764|gb|EEI09091.1| threonine--tRNA ligase [Lactobacillus reuteri MM2-3]
 gi|324977772|gb|EGC14723.1| threonine--tRNA ligase [Lactobacillus reuteri MM4-1A]
          Length = 627

 Score =  485 bits (1248), Expect = e-134,   Method: Composition-based stats.
 Identities = 195/597 (32%), Positives = 323/597 (54%), Gaps = 21/597 (3%)

Query: 56  EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPF 114
           +GS++ I  +    L  +R   A ++  A++  +  +++      EDGF+ D DK+ Q  
Sbjct: 36  DGSVKKIDRDSQEGLEALRKLSALMLKAALKQEFKGIRLGEAVADEDGFHVDSDKDNQQV 95

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
           S+DEL  +E  ++ +   D       +  E+A    E K + +  E++        V +Y
Sbjct: 96  SADELPALEDVIKGMAKNDVKVEFVEVPVEEALA--EVKDDRFSTELINENAKDGKVAMY 153

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
           + G+         +   G V K  +L+ VAGAYW+G S+ PML RIYGT +  +  L + 
Sbjct: 154 QLGD-VKAVADDDILLYGNVVKNLRLLSVAGAYWKGMSSNPMLQRIYGTVFYKKDALEED 212

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYE 292
           L   +E+++RDHR +  ++DLF +      G+ +W  KG  I +T+  Y+  R++ D Y+
Sbjct: 213 LKKRQEAKERDHRVIGNQLDLFFVDPKVGAGLPYWLPKGATIRRTIERYIIDREVADGYQ 272

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
            + TP +++   ++ SGHW+ YR +MF          D     L+PMNCP H+ V+ H +
Sbjct: 273 HVYTPVLMNLDAYKTSGHWEHYRDDMFPPMDMG----DGEMLELRPMNCPSHIQVYKHHI 328

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
           +SYR+LP+R+AE G ++R E SG+L GL RVR  T +D H F T +Q+ +E  KI  LI+
Sbjct: 329 RSYRDLPLRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVTLDQIRSEFAKILKLIM 388

Query: 413 SIYKDFGFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
           S+Y+DF       +LS R  K       +D +W+ +++++K  +D +       ++    
Sbjct: 389 SVYEDFDITDYSFRLSLRDPKNVKKYYANDEMWEKSQSMLKSAMDDLN------LDYYEA 442

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
            GE AFYGPK +   K A+G D    TIQ+DF LP RF   YV    ++  PVMIHR V 
Sbjct: 443 EGEAAFYGPKLDIQTKTALGNDETMSTIQLDFMLPERFGLSYVGQDGKEHQPVMIHRGVV 502

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFR 587
           G++ERF+  + E +KG  P WL+P Q  +  +      EYA ++A  +K+ ++ +  D R
Sbjct: 503 GTMERFMAYLTEIYKGAFPTWLAPEQVHIIPVNEEAHGEYADDLAKKMKAANIRVNVDHR 562

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           NE + YKIRE   +K+P  ++ GD E +   + +R++G     ++S    +  + ++
Sbjct: 563 NEKMGYKIREAQTQKVPYTLVVGDDEKNNNGVSVRKYGEKEQNEMSQEAFMNEILED 619


>gi|289642063|ref|ZP_06474216.1| threonyl-tRNA synthetase [Frankia symbiont of Datisca glomerata]
 gi|289508136|gb|EFD29082.1| threonyl-tRNA synthetase [Frankia symbiont of Datisca glomerata]
          Length = 610

 Score =  485 bits (1248), Expect = e-134,   Method: Composition-based stats.
 Identities = 198/591 (33%), Positives = 310/591 (52%), Gaps = 32/591 (5%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           L   RHS AH++A AV   +P+ ++ +GP   DGFYYDF   +P + ++LA ++++++ +
Sbjct: 16  LYAKRHSVAHLLAHAVLEKFPDAKLGVGPPTRDGFYYDFALPRPLTPEDLAGLQERVRAL 75

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKE------------NVTLYRQG 177
           I     F +  L+ ++A        +  K+E++  I A               +++Y  G
Sbjct: 76  IRDGVRFERHELTTDEAV--TRFADQPLKLELIRDIVAGGVDDNGEPIEGPVELSVYESG 133

Query: 178 EWFDLCRGPHVRSTGQVKK-FFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           ++ DLCRGPH+  +  +      L++V+GAYWRGD  R  L RIYGT  ++ +EL  YL+
Sbjct: 134 DFEDLCRGPHIEDSSAIHPDAVALLRVSGAYWRGDEKRQQLQRIYGTVMDSPKELRHYLW 193

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEI 294
            LEE++KRDHR +   +DLF  +     G+  W   G  +   L ++ R  +    Y+ I
Sbjct: 194 QLEEAKKRDHRVIGEALDLFAFSPAVGKGLPLWLPNGTIVRDELETWAREVERAHGYQRI 253

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
            TP +    L+  SGH   Y  ++++         D   + LKPMNCP H  V+    +S
Sbjct: 254 VTPHITKSDLYYISGHLPYYADDLYSPIDI-----DGEEYYLKPMNCPHHHMVYKARPRS 308

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YRELP+RLAE+G+VYR E SG L G+MRVRGF+Q+DAH++CT+EQ  +E L +  L    
Sbjct: 309 YRELPLRLAEYGTVYRYERSGQLFGMMRVRGFSQNDAHIYCTREQAIDEFLAVMRLHALY 368

Query: 415 YKDFGFEKIMV----KLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
           Y   G E   +    +     EK  G + +W +AE I +  ++      Q  I     +G
Sbjct: 369 YDKLGIEDYHMVLALRDPKNTEKYHGDELMWQEAERITRDAME------QSGIPYIEDIG 422

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
             A YGPK +++L    GR++   T QVD  +P +F   + N H E    V++HRA  GS
Sbjct: 423 GAAHYGPKVDFVLTSVTGREFAASTNQVDLYMPEQFGLTFTNRHGEAEQAVVLHRAPLGS 482

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
            ERF+  +IE+F G  P+WL+P+Q  V  I+    + A  +   L    +  E D  + T
Sbjct: 483 HERFVAFLIEHFAGAFPVWLAPVQVRVVPISDRQADGAAAVWRRLVDAGIRAELDDSDNT 542

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           +  KIR    +K+P + + GD+E    S+ +R  G        + + I  L
Sbjct: 543 MQAKIRRAEQQKVPYVAVIGDRELENDSVSVRARGRRNLGSRPVPELIEKL 593


>gi|262043503|ref|ZP_06016623.1| threonine-tRNA ligase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259039149|gb|EEW40300.1| threonine-tRNA ligase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 530

 Score =  483 bits (1244), Expect = e-134,   Method: Composition-based stats.
 Identities = 259/531 (48%), Positives = 353/531 (66%), Gaps = 14/531 (2%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIE 60
              +  T PDGS+K+    AT  +VAESI  S+AK AV   I+GK  DL +  +  G + 
Sbjct: 11  SEPLTFTLPDGSLKHVRKGATLQNVAESIGSSVAKSAVYAEIDGKCVDLLEKAKNSGKLN 70

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           IIT  D  +L  IR  C  ++A +V+ ++P  ++  G + ++GFYYDF  ++PF+ D+L 
Sbjct: 71  IITVFDEEALGPIRRGCLLLLAASVKQLFPSARMVEGQLTKEGFYYDFAVDKPFTRDDLG 130

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IE+ M  +IA + P +K+ ++  +A + FE + E +K   L  I A ++VTL    ++ 
Sbjct: 131 MIEQHMTSLIAENPPIIKEQVTRAQAIDCFEQRGEKFKSTELMEILADKSVTLCHLRQFT 190

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           D   GP V     +K   KL+ V+GAYWRG++N   L RIYGTAW ++++L  +L    E
Sbjct: 191 DGFNGPLVPDLRFLKN-MKLLNVSGAYWRGEANNVQLQRIYGTAWASKKQLDGWLEKTAE 249

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQV 299
           +EKRDHRKL RE+DLFH  ++  G +FWH +GW IFQ+LI+YMR R     Y E+NTP V
Sbjct: 250 AEKRDHRKLGRELDLFHFQDNAPGAVFWHPRGWTIFQSLIAYMRSRHEVAGYVEVNTPDV 309

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           +D+ LW+ SGHWD+YR +MF  +      +D R FALKPMNCPG V++F +G+KSYR+LP
Sbjct: 310 MDRSLWEISGHWDNYRDHMFTTQ-----TEDGRNFALKPMNCPGAVSLFKYGIKSYRDLP 364

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           VRL+EFG V+R EPSGSLHGL+RVR FTQDDAH+FCT +Q+  EC  I  L++ IYK FG
Sbjct: 365 VRLSEFGKVHRYEPSGSLHGLLRVRHFTQDDAHIFCTLQQVEGECKSILQLVLDIYKQFG 424

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           FE++ +KLSTRPEKR+GSDA WD  EN +   L+         +   V  GEGAFYGPK 
Sbjct: 425 FEEVAIKLSTRPEKRMGSDADWDRLENALSASLEA------QGLQWSVNPGEGAFYGPKL 478

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           E++L+DAIGRDWQCGT+QVD NLP RF+  Y+        PVM+HRA+FGS
Sbjct: 479 EFVLRDAIGRDWQCGTLQVDMNLPERFDIGYIAEDGSTKRPVMLHRALFGS 529


>gi|296423870|ref|XP_002841475.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295637715|emb|CAZ85666.1| unnamed protein product [Tuber melanosporum]
          Length = 658

 Score =  483 bits (1244), Expect = e-134,   Method: Composition-based stats.
 Identities = 217/650 (33%), Positives = 327/650 (50%), Gaps = 98/650 (15%)

Query: 3   SDIKLTFPDGSIKNF-PVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIE 60
            DI ++ PDG +        T S +A  IS+SL +K V   ++G V DL  P  + G++E
Sbjct: 85  EDITISLPDGKVVAGKSWETTPSSIARGISKSLFEKTVIAKVDGNVWDLERPFEKSGTLE 144

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ--PFSSDE 118
           ++  EDP    V  HS AH++ EA +  +    + +GP  +DGF+Y+    +    ++ +
Sbjct: 145 LLDFEDPEGRRVFWHSSAHVLGEAAERRF-GCHLCLGPPTDDGFFYEMGLGEGEVVTATD 203

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
              +E   Q+ I    PF +                          IP   + T+YR G 
Sbjct: 204 YKPLETIAQKAIKEKQPFERL-------------------------IPDGTSTTVYRCGP 238

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLC GPHV +TG++K F  + K + +Y+ GD+    L RIYG ++  +++L ++   L
Sbjct: 239 LIDLCVGPHVPNTGRIKAFQVM-KNSSSYFLGDAINDSLQRIYGVSFPDKKQLEEHKKLL 297

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
           EE+ KRDHRK+ +E +LF   E   G  F+   G +I+ TL+ Y+R++     YEE+ TP
Sbjct: 298 EEAAKRDHRKIGKEQELFFFHELSPGSCFFLPHGTRIYNTLVGYLRQEYWKRGYEEVITP 357

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +  LW+ SGHW +Y+ NMF  +   D       + LKPMNCPGH  +F H  +SYRE
Sbjct: 358 NMYNAKLWETSGHWQNYQENMFTFEVEKDK------YGLKPMNCPGHCLLFGHRERSYRE 411

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP R+A+FG ++RNE SG+L GL RVR F QDD HVFCT+EQ+ +E   + + + ++Y  
Sbjct: 412 LPWRVADFGVIHRNEFSGALTGLTRVRRFQQDDTHVFCTEEQVGSEIHGLFDFLKTVYGL 471

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
            GF    +KLSTRPEK VG  A WD AE  +   LD        +    +  G+GAFYGP
Sbjct: 472 LGFT-FKLKLSTRPEKFVGDIATWDSAEAQLTKALDEFTAGGGGK--WEMNPGDGAFYGP 528

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  + DA+ R+                                 H+++ GS+ERFI I
Sbjct: 529 KIDITISDALRRE---------------------------------HQSILGSVERFIAI 555

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FRNETINYKIR 596
           + E+F G  P WLSP Q +V  + ++A  Y  EI  L       +  D + + T++    
Sbjct: 556 LTEHFGGKWPFWLSPRQILVIPVMAAANNYVLEIQKL------RLGLDSYNSTTLS---- 605

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK----VSLLDAIPILT 642
                    +   G +E   RS+ IR   +  TQ     V +  A+  L 
Sbjct: 606 ---------LAFVGAEEEESRSVNIRNRDNKETQNKGELVPIDVALEKLC 646


>gi|227543651|ref|ZP_03973700.1| threonine--tRNA ligase [Lactobacillus reuteri CF48-3A]
 gi|300908708|ref|ZP_07126171.1| threonine--tRNA ligase [Lactobacillus reuteri SD2112]
 gi|227186362|gb|EEI66433.1| threonine--tRNA ligase [Lactobacillus reuteri CF48-3A]
 gi|300894115|gb|EFK87473.1| threonine--tRNA ligase [Lactobacillus reuteri SD2112]
          Length = 627

 Score =  483 bits (1243), Expect = e-134,   Method: Composition-based stats.
 Identities = 196/597 (32%), Positives = 323/597 (54%), Gaps = 21/597 (3%)

Query: 56  EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPF 114
           +GS++ I  +   SL  +R   A ++  A++  +  +++      EDGF+ D DK+ Q  
Sbjct: 36  DGSVKKIDRDSQESLEALRKLSALMLKAALKQEFKGIRLGEAVADEDGFHVDSDKDNQQV 95

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
           S+DEL  +E  ++ +   D       +  E+A    E K + +  E++        V +Y
Sbjct: 96  SADELPALEDVIKGMAKNDVKVEFVEVPVEEALA--EVKDDRFSTELINENAKDGKVAMY 153

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
           + G+         +   G V K  +L+ VAGAYW+G S+ PML RIYGT +  +  L + 
Sbjct: 154 QLGD-VKAVADDDILLYGNVVKNLRLLSVAGAYWKGMSSNPMLQRIYGTVFYKKDALEED 212

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYE 292
           L   +E+++RDHR +  ++DLF +      G+ +W  KG  I +T+  Y+  R++ D Y+
Sbjct: 213 LKKRQEAKERDHRVIGNQLDLFFVDPKVGAGLPYWLPKGATIRRTIERYIIDREVADGYQ 272

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
            + TP +++   ++ SGHW+ YR +MF          D     L+PMNCP H+ V+ H +
Sbjct: 273 HVYTPVLMNLDAYKTSGHWEHYRDDMFPPMDMG----DGEMLELRPMNCPSHIQVYKHHI 328

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
           +SYR+LP+R+AE G ++R E SG+L GL RVR  T +D H F T +Q+ +E  KI  LI+
Sbjct: 329 RSYRDLPLRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVTLDQIRSEFAKILKLIM 388

Query: 413 SIYKDFGFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
           S+Y+DF       +LS R  K       +D +W+ +++++K  +D +       ++    
Sbjct: 389 SVYEDFDITDYSFRLSLRDPKNVKKYYANDEMWEKSQSMLKSAMDDLN------LDYYEA 442

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
            GE AFYGPK +   K A+G D    TIQ+DF LP RF   YV    ++  PVMIHR V 
Sbjct: 443 EGEAAFYGPKLDIQTKTALGNDETMSTIQLDFMLPERFGLSYVGQDGKEHQPVMIHRGVV 502

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFR 587
           G++ERF+  + E +KG  P WL+P Q  +  +      EYA  +A  +K+ ++ +  D R
Sbjct: 503 GTMERFMAYLTEIYKGAFPTWLAPEQVHIIPVNEEAHGEYADNLAKKMKAANIRVNVDHR 562

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           NE + YKIRE   +K+P  ++ GD E +   + +R++G     ++S    +  + ++
Sbjct: 563 NEKMGYKIREAQTQKVPYTLVVGDDEKNNNGVSVRKYGEKEQNEMSQEAFMNEILED 619


>gi|224539835|ref|ZP_03680374.1| hypothetical protein BACCELL_04745 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224518545|gb|EEF87650.1| hypothetical protein BACCELL_04745 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 519

 Score =  482 bits (1241), Expect = e-134,   Method: Composition-based stats.
 Identities = 208/521 (39%), Positives = 317/521 (60%), Gaps = 17/521 (3%)

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
           +A+    +++ +S   A + F  + E YK E++  +     +T Y QG + DLCRGPH+ 
Sbjct: 2   VAKKEAVVRESISKTDALKKFGDRGENYKCELISEL-EDGRITTYTQGAFTDLCRGPHLM 60

Query: 190 STGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKL 249
           +T  +K   KLM VAGAYWRG  +R M++RIYG  +  ++ L +YL  LEE++KRDHRK+
Sbjct: 61  TTAPIK-AIKLMSVAGAYWRGHEDRKMMTRIYGITFPKKKMLDEYLAMLEEAKKRDHRKI 119

Query: 250 AREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQ 307
            +EMDLF  ++    G+  W  KG  +   L  ++RR + + DY+E+ TP + ++ L+  
Sbjct: 120 GKEMDLFMFSDTVGKGLPMWLPKGTALRLRLQEFLRRIQARYDYQEVITPPIGNKLLYIT 179

Query: 308 SGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGS 367
           SGH+  Y  + F       T ++   + LKPMNCP H  ++ +  +SY++LP+RLAEFG+
Sbjct: 180 SGHYAKYGKDSFQ---PIHTPEEGEEYFLKPMNCPHHCMIYKNSPRSYKDLPLRLAEFGT 236

Query: 368 VYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKL 427
           V R E SG LHGL RVR FTQDDAH+FC  +Q+ +E L++ ++I  +++   F  +  ++
Sbjct: 237 VCRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKDEFLRVMDIISIVFRSMDFANVEAQI 296

Query: 428 STR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           S R     EK +GSD  W+ AE  +    +      +  ++  +  GE AFYGPK ++++
Sbjct: 297 SLRDKVNREKYIGSDENWERAEQSIIEACE------EKGLSARIEYGEAAFYGPKLDFMV 350

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           KDAIGR WQ GTIQVD+NLP RF   Y  + ++K  PVMIHRA FGS+ERF+ ++IE+  
Sbjct: 351 KDAIGRRWQLGTIQVDYNLPERFELEYTGADNQKHRPVMIHRAPFGSMERFVAVLIEHTA 410

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  PLWL+P Q  +  I+    +YAQE+   LK + +    D RNE I  KIR++ +K+I
Sbjct: 411 GKFPLWLTPEQVAILPISEKFNDYAQEVKKFLKQYDIRAIVDERNEKIGRKIRDNELKRI 470

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P ++I G+KEA  R + +R+ G      +   +   IL +E
Sbjct: 471 PYMLIVGEKEAENREVSVRKQGEGDKGTMKFEEFAKILNEE 511


>gi|312870359|ref|ZP_07730484.1| threonine--tRNA ligase [Lactobacillus oris PB013-T2-3]
 gi|311094060|gb|EFQ52379.1| threonine--tRNA ligase [Lactobacillus oris PB013-T2-3]
          Length = 600

 Score =  482 bits (1240), Expect = e-134,   Method: Composition-based stats.
 Identities = 185/596 (31%), Positives = 317/596 (53%), Gaps = 20/596 (3%)

Query: 56  EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFS 115
           +GS++ I  +    L  +R   + ++ +++   +  +++      E+GF+ D DK++   
Sbjct: 10  DGSVKKIDRDSEEGLQALRKLASLLLKDSLHQEFKGIRLGESVADENGFHVDSDKDEQQV 69

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           S +     +      A+++      +  + A    E K + Y  E+++       V +Y+
Sbjct: 70  SADELSALQDALLAKAKNAKVEFVEVDLDDALA--EVKDDPYSSELIKEAAKDGKVAMYQ 127

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
            G+         +   G   K  KL+ VAGAYW+G S+ PML RIYGT +  ++ L + +
Sbjct: 128 VGD-VKAVADDDILLYGDAIKHLKLLSVAGAYWKGMSSNPMLQRIYGTVFFNKEALDEDM 186

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEE 293
              +E+ + DHR +  ++DLF +      G+ +W  KG  I +T+  Y+  R++ D YE 
Sbjct: 187 KKRQEAREHDHRVIGNQLDLFFVDPKVGAGLPYWMPKGATIRRTIERYIIDREVADGYEH 246

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           + TP +++   ++ SGHW+ YR +MF          D     ++PMNCP H+ ++ H ++
Sbjct: 247 VYTPVLMNLDAYKTSGHWEHYRDDMFPPMDMG----DGEMLEIRPMNCPSHIQIYKHHIR 302

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYR+LP+R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  KI NLI+ 
Sbjct: 303 SYRDLPMRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVAVDQIRDEFAKILNLIMD 362

Query: 414 IYKDFGFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL 469
           +YKDF       +LS R  K      G+D +WD+++ ++K  +D +       ++     
Sbjct: 363 VYKDFDITDYSFRLSLRDPKNKEKYYGNDEMWDESQKLLKAAMDDLN------LDYYEAE 416

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG 529
           GE AFYGPK +   K A+G D    TIQ+DF  P RF   YV    ++  PVMIHR + G
Sbjct: 417 GEAAFYGPKLDIQTKTALGNDETMSTIQLDFMQPDRFGLSYVGKDGKEHMPVMIHRGIVG 476

Query: 530 SIERFIGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRN 588
           ++ERF+  + E +KG  P WL+P Q  +  ++     +YAQ++A+ +K+  + +  D RN
Sbjct: 477 TMERFVAYLTEIYKGAFPTWLAPEQVHIIPVSEEKHGDYAQKLADKMKAAQIRVVVDDRN 536

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           E + YKIRE   +K+P  ++ GD E    ++ +R++G      +S  D +  +  +
Sbjct: 537 EKMGYKIREAQTQKVPYTLVVGDDEVKNNAVSVRKYGEDAQNSMSQDDFMNEILAD 592


>gi|223938078|ref|ZP_03629976.1| threonyl-tRNA synthetase [bacterium Ellin514]
 gi|223893292|gb|EEF59755.1| threonyl-tRNA synthetase [bacterium Ellin514]
          Length = 618

 Score =  482 bits (1240), Expect = e-133,   Method: Composition-based stats.
 Identities = 214/596 (35%), Positives = 333/596 (55%), Gaps = 31/596 (5%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           L  +RHSCAH++A A+  +WP+ Q A GP +E+GFYYD +     S ++  +IE +M++ 
Sbjct: 21  LERVRHSCAHVLATAILRLWPDAQFAAGPPVENGFYYDVELSHRISPEDFEKIEAEMKKE 80

Query: 130 IARDSPFLKQYLSHEKARELFE----------SKKEAYKVEILESIPAKENVTLYRQGEW 179
              ++ F K  ++ E+A +  +               +K++I+++IP  E ++ Y+ G++
Sbjct: 81  TKANNTFEKVVVTREQAIKDAQTGRLAALGERGTPSKFKLDIVQNIPENEPISYYKNGDF 140

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLC GPHV  TG +  F KL  VA AY++GD   P L RIYGTA+  + E+  Y   LE
Sbjct: 141 LDLCAGPHVMRTGNIGAF-KLTHVASAYYKGDEKNPQLQRIYGTAFKNKTEMEAYFTMLE 199

Query: 240 ESEKRDHRKLAREMDLFHIAED--GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINT 296
           E++KRDHRK+ +EM LF I  +  G G+  W  KG  I + L +  +  +    Y  + T
Sbjct: 200 EAKKRDHRKIGQEMGLFAIDTEYVGPGLPLWLPKGTMIVEELENLAKETEFAAGYVRVKT 259

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKC----ADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           P +  + +++ SGH   Y  +MF          D+ ++   + LK MNCP H  +F    
Sbjct: 260 PHLAKEKMYKTSGHLPYYAESMFPPMELKEKGGDSNEEAERYYLKAMNCPHHHRIFAAEP 319

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
            SYR+LP+RLAE+G+ YR E SG L GLMRVR    +DAH++CT+EQ  +E   ++ + +
Sbjct: 320 HSYRDLPLRLAEYGTCYRYEQSGELFGLMRVRSLNMNDAHIYCTEEQFADEFNAVNEMYL 379

Query: 413 SIYKDFGFEKIMVKLSTRPEKRVGS-----DALWDDAENIMKGVLDTIKNSSQDRINTGV 467
             +K FG EK  ++ ST   KR+G        LW   E++++ VL       ++ IN   
Sbjct: 380 KYFKIFGLEKYQMRFSTHDPKRLGDKFVNEPELWKKTEDMVRNVL------VKNNINFVE 433

Query: 468 LLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAV 527
           +  E AFYGPK +  +  AIGR++   T QVDF +P++F   Y +  + +  P+ IHRA 
Sbjct: 434 VPNEAAFYGPKIDVQVWSAIGREFTIATNQVDFAVPAKFGLTYRDRDNTEKTPLCIHRAP 493

Query: 528 FGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA--VEYAQEIANLLKSHHLSIETD 585
            G+ ERFIG +IE++ GN PLWL+P Q  V TI      V YA+ IAN L+++ +  ETD
Sbjct: 494 LGTHERFIGFLIEHYAGNFPLWLAPDQVRVLTIGDDEALVNYAKLIANELRANMVRCETD 553

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           FR + I  KI E    K+  +++ G ++    ++ +R  G  +       + I  +
Sbjct: 554 FRTDPIKAKIAEAEQTKVHTMLVIGPRDMEAGNVSVRLHGKGSLGAKPKGEVIADI 609


>gi|110004597|emb|CAK98934.1| probable threonyl-trna synthetase 1 protein [Spiroplasma citri]
          Length = 638

 Score =  481 bits (1238), Expect = e-133,   Method: Composition-based stats.
 Identities = 205/651 (31%), Positives = 338/651 (51%), Gaps = 24/651 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            IK+T PDG ++ F    T   +A SI+ SL K A      G+V  L   V  +G++EII
Sbjct: 1   MIKITLPDGQVREFNTPQTIHAIASSIASSLGKAAFGGVFAGQVRGLDYLVTTDGTLEII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T + P +LA++ ++ A I A+A+ +++P  ++A     +D F  DFD E      +L+ +
Sbjct: 61  TDKSPLALAILHYTTALITAKAITNLYPTAKIAKIAAQDDTFLVDFDVEPHLKETDLSAL 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           ++++ ++I  +        +   A++        Y +       A++    Y  G    L
Sbjct: 121 DQEVTKLINNNLVIKPVLGALADAKKW--YNNNPYLLTFCAETGAEQ--GGYLLGNELYL 176

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
                V S   +K   KL  +AGAYW+ D+   ML R+ G++  +++   Q L+  EE  
Sbjct: 177 PNTYPVTSLKHIK-VLKLWSLAGAYWQDDAKNKMLQRLTGSSHFSRELFEQVLFAYEERR 235

Query: 243 KRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
           +RDHRK+ +++++F   +  G G+  W   G  + + L  Y+R K  + D+ E++TP + 
Sbjct: 236 ERDHRKIGKDLEIFTFDKLVGPGLPIWLPNGMALKKVLQEYIREKEWEYDFTEVDTPVIG 295

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
              +++ SGHWD Y+ NMFA    ++ I       L+PM CP H+AV+N+  +SYRELP+
Sbjct: 296 TSEMYKISGHWDHYQENMFAPMAQNNEIS-----VLRPMACPHHIAVYNYKQRSYRELPL 350

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE   ++R E SGSL GL RVR     D+H+F   +Q+  E  +   LI  +  D   
Sbjct: 351 RIAEHAILHRYETSGSLTGLERVRMMQLTDSHIFLRHDQLKEEFKRCFKLINEVLTDLKI 410

Query: 421 EKIMV----KLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
                    +     EK    + +W+ AE +++  LD +K      I    ++GE AFYG
Sbjct: 411 TVDYYSLSLRDPANKEKYYDDNQMWNHAEQMLQEALDDLK------IPYVPMIGEAAFYG 464

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK +  +K A+  +    T+Q DF LP +FN  Y++    K  PVM+HR + G+ ERFI 
Sbjct: 465 PKLDIQIKTALNHEITVSTLQFDFLLPKKFNLSYIDETGAKAMPVMLHRGLIGTYERFIA 524

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
           I++E  KG LP WL+P Q ++  + +   +EY  E+    K   L    D R+E ++YKI
Sbjct: 525 ILLEQTKGVLPFWLAPKQIVIIPVNNEHHLEYVNELHQQFKKLKLRTTIDDRDERLSYKI 584

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           RE  + KIP  I+ GD+E  ++ I  R +G       +    I ++ ++ +
Sbjct: 585 REAQVAKIPYQIVIGDQERDKKMITYRIYGQEDQITTTFDKFIILINEQII 635


>gi|227514102|ref|ZP_03944151.1| threonine--tRNA ligase [Lactobacillus fermentum ATCC 14931]
 gi|227087473|gb|EEI22785.1| threonine--tRNA ligase [Lactobacillus fermentum ATCC 14931]
          Length = 634

 Score =  480 bits (1235), Expect = e-133,   Method: Composition-based stats.
 Identities = 194/596 (32%), Positives = 327/596 (54%), Gaps = 21/596 (3%)

Query: 54  VREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-Q 112
           +  G++E +  E   SL  +R   A ++  A+Q  +  +++      ED F+ D DK+ Q
Sbjct: 41  LPNGTVEKVDRESKESLDALRQVAALLLKAALQDQFKGIRLGEAVAEEDQFFVDSDKDNQ 100

Query: 113 PFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVT 172
             S+DEL  +E+ ++++   +       +S + A +  E   + +  E+L+       V+
Sbjct: 101 QVSADELEGLERAVKKLAKENLKIELVKVSVDDAVKAVE--GDQFSSELLKENAEDGQVS 158

Query: 173 LYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELT 232
           LY+ G+   L + P +     + K  KL+ VAGAYW+G S+ PML RIYGT +  +++L 
Sbjct: 159 LYKMGDTTILAQAP-IMLYANLVKNVKLLSVAGAYWKGMSSNPMLQRIYGTVFFKKEDLE 217

Query: 233 QYLYFLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISY-MRRKIKDD 290
             L   +E+ +RDHR +  ++DLF +      G+ +W  KG  I +T+  Y + +++ D 
Sbjct: 218 ADLKARQEARERDHRVIGNQLDLFFVDPKVGAGLPYWMPKGSTIRRTIERYVIDKEVGDG 277

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH 350
           YE + TP +++   ++ SGHWD YR +MF          D     L+PMNCP H+ ++ H
Sbjct: 278 YEHVYTPVLMNLDAYKTSGHWDHYREDMFPPMDMG----DGELLELRPMNCPSHIQIYKH 333

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
            ++SYRELP+R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  KI  L
Sbjct: 334 HIRSYRELPLRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQIQDEFAKILKL 393

Query: 411 IISIYKDFGFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           I+ +YKDF       +LS R  K       +D +W+ +++++K  +D++       ++  
Sbjct: 394 IMDVYKDFNINDYTFRLSYRDPKNTEKYFANDEMWERSQSMLKAAMDSMG------LDYY 447

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
              GE AFYGPK +   K A+G D    TIQ+DF LP +F+  YV    ++  PVMIHR 
Sbjct: 448 EAEGEAAFYGPKLDIQTKTALGNDETMSTIQLDFMLPEKFDLHYVGEDGKQHRPVMIHRG 507

Query: 527 VFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETD 585
           V G++ERF+  + E +KG  P WL+P Q  +  ++     +YA ++A   ++  L    D
Sbjct: 508 VVGTMERFVAYLTEIYKGAFPTWLAPNQVNIIPVSDEKHGDYADDLAREFRAAQLRTVVD 567

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            R+E + YKIRE   +K+P  ++ G+ E +  ++ +R++G      +S  D + ++
Sbjct: 568 HRSEKMGYKIRESQTQKVPYTLVVGEDEVANGTVSVRKYGEKDQVSMSKQDFLDLI 623


>gi|184156306|ref|YP_001844646.1| threonyl-tRNA synthase [Lactobacillus fermentum IFO 3956]
 gi|183227650|dbj|BAG28166.1| threonyl-tRNA synthase [Lactobacillus fermentum IFO 3956]
          Length = 634

 Score =  480 bits (1234), Expect = e-133,   Method: Composition-based stats.
 Identities = 194/596 (32%), Positives = 327/596 (54%), Gaps = 21/596 (3%)

Query: 54  VREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-Q 112
           +  G++E +  E   SL  +R   A ++  A+Q  +  +++      ED F+ D DK+ Q
Sbjct: 41  LPNGTVEKVDRESKESLDALRQVAALLLKAALQDQFKGIRLGEAVAEEDQFFVDSDKDNQ 100

Query: 113 PFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVT 172
             S+DEL  +E+ ++++   +       +S + A +  E   + +  E+L+       V+
Sbjct: 101 QVSADELEGLERAVKKLAKENLKIELVKVSVDDAVKAVE--GDQFSSELLKENAEDGQVS 158

Query: 173 LYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELT 232
           LY+ G+   L + P +     + K  KL+ VAGAYW+G S+ PML RIYGT +  +++L 
Sbjct: 159 LYKMGDATILAQAP-IMLYANLVKNVKLLSVAGAYWKGMSSNPMLQRIYGTVFFKKEDLE 217

Query: 233 QYLYFLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISY-MRRKIKDD 290
             L   +E+ +RDHR +  ++DLF +      G+ +W  KG  I +T+  Y + +++ D 
Sbjct: 218 ADLKARQEARERDHRVIGNQLDLFFVDPKVGAGLPYWMPKGSTIRRTIERYVIDKEVGDG 277

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH 350
           YE + TP +++   ++ SGHWD YR +MF          D     L+PMNCP H+ ++ H
Sbjct: 278 YEHVYTPVLMNLDAYKTSGHWDHYREDMFPPMDMG----DGELLELRPMNCPSHIQIYKH 333

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
            ++SYRELP+R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  KI  L
Sbjct: 334 HIRSYRELPLRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQIQDEFAKILKL 393

Query: 411 IISIYKDFGFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           I+ +YKDF       +LS R  K       +D +W+ +++++K  +D++       ++  
Sbjct: 394 IMDVYKDFNINDYTFRLSYRDPKNTEKYFANDEMWERSQSMLKAAMDSMG------LDYY 447

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
              GE AFYGPK +   K A+G D    TIQ+DF LP +F+  YV    ++  PVMIHR 
Sbjct: 448 EAEGEAAFYGPKLDIQTKTALGNDETMSTIQLDFMLPEKFDLHYVGEDGKQHRPVMIHRG 507

Query: 527 VFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETD 585
           V G++ERF+  + E +KG  P WL+P Q  +  ++     +YA ++A   ++  L    D
Sbjct: 508 VVGTMERFVAYLTEIYKGAFPTWLAPNQVNIIPVSDEKHGDYADDLAREFRAAQLRTVVD 567

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            R+E + YKIRE   +K+P  ++ G+ E +  ++ +R++G      +S  D + ++
Sbjct: 568 HRSEKMGYKIRESQTQKVPYTLVVGEDEVANGTVSVRKYGEKDQVSMSKQDFLDLI 623


>gi|149200279|ref|ZP_01877300.1| threonyl-tRNA synthetase [Lentisphaera araneosa HTCC2155]
 gi|149136643|gb|EDM25075.1| threonyl-tRNA synthetase [Lentisphaera araneosa HTCC2155]
          Length = 603

 Score =  480 bits (1234), Expect = e-133,   Method: Composition-based stats.
 Identities = 219/594 (36%), Positives = 332/594 (55%), Gaps = 19/594 (3%)

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQI 122
            ++  +L  IRHS AH++A+AVQ ++P+V++  GP IE GFYYDFD  E+ F+ ++L +I
Sbjct: 1   MDENSNLYKIRHSMAHVLAQAVQEVYPKVKLGFGPPIETGFYYDFDFSEEEFAENKLKEI 60

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKE-AYKVEILESIPAK--ENVTLYRQGEW 179
           EK+M++II R   F       E A    E   E  YK+E + ++ ++  E  + Y  G +
Sbjct: 61  EKRMKKIIGRKQEFHYSETDIEGAVAKLEDLGEGEYKIENVRNLHSRGVEKFSFYENGNF 120

Query: 180 FDLCRGPHVRSTGQ-VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
            DLC GPHV +TG    K FKL +VAGAYW G      L+RIY   + T +EL  +L   
Sbjct: 121 ADLCEGPHVETTGDLPAKAFKLDRVAGAYWLGSEKNKQLTRIYALCFETPEELQSFLERR 180

Query: 239 EESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINT 296
             +E+ DH+KL +E+D+FH  E    G+  W   G  I   +  Y R  ++K  Y+ ++T
Sbjct: 181 RIAEQFDHKKLGKELDIFHFDEKVGKGLALWMPNGTIIRDEIEKYAREMEMKYGYQRVST 240

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKC--ADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
           P +  + L+Q SGH   Y  +MF        D  ++   + LK MNCP H  +++   +S
Sbjct: 241 PHIASEKLFQTSGHLPYYADSMFPPMELNEGDDAENSEKYYLKAMNCPYHHLIYSARPRS 300

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           Y+ELP RL E+G+ YR E SG L GL+RVR  T +DAHV+ T++Q   E   +  + +  
Sbjct: 301 YKELPYRLCEYGTCYRYEKSGELSGLLRVRCMTMNDAHVYLTEDQFEEEFRSMVKMYMEF 360

Query: 415 YKDFGFEKIMVKLSTRPE--KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
           Y+ F F     +LS R +  K VG  A+WD AE ++  V+D +       +   V  GE 
Sbjct: 361 YETFKFSDYSFRLSVRDDSDKFVGDPAVWDQAEALLAKVMDELG------LEYFVGEGEA 414

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFN--LPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           AFYGPK +   K+ +GR+    TIQVDF      +F   YV+S + +  P++IHRA   +
Sbjct: 415 AFYGPKIDVQFKNLMGREETLSTIQVDFQSACKEKFALKYVDSDNTEKEPIIIHRAPLST 474

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
            ERFI  ++E + G  P W +P+Q  +  +  S +E+   IAN L      +E D  N T
Sbjct: 475 HERFISFIMEYYGGAFPAWCAPVQVCILPVQDSCMEFTNSIANELTRDLYRVEIDDSNNT 534

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            N KIR ++ +KIPI++I G++E ++ ++ +RR+GS     VS  + + I   E
Sbjct: 535 FNKKIRTNTKRKIPILLIIGEQEVADNTVTVRRYGSRDQITVSRDEFVAIFKAE 588


>gi|123449736|ref|XP_001313584.1| threonyl-tRNA synthetase family protein [Trichomonas vaginalis G3]
 gi|121895473|gb|EAY00655.1| threonyl-tRNA synthetase family protein [Trichomonas vaginalis G3]
          Length = 709

 Score =  479 bits (1232), Expect = e-133,   Method: Composition-based stats.
 Identities = 222/668 (33%), Positives = 345/668 (51%), Gaps = 50/668 (7%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAV--AVAIN-GKVCDLSDPVREGS- 58
             I +T             T  D+   I      K +  A AIN  ++ DLS P+  G  
Sbjct: 57  KQITITL---------GVTTPLDI---IKAEYPPKTIFYAAAINLEEMWDLSRPITHGDN 104

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD--KEQPFSS 116
           I  +  +DPR   V  HS AH++  A+++   +V++AIGP  E GF+YD++  + Q  + 
Sbjct: 105 ITFVNFDDPRGKEVFWHSSAHVLGAAIETHL-QVEIAIGPAGEKGFFYDYEPREGQEVTP 163

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYR 175
           + L +IEK    I      + ++  + E+A E+       YK EIL   +   E V+LYR
Sbjct: 164 ETLKEIEKAAISICNHKVDYERKMCTREEALEI--FSSNHYKTEILTNRVAPGELVSLYR 221

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
            G + DLCRGPH+ +   +  ++ +M V+   W GD+    + RI    +  ++++T++ 
Sbjct: 222 TGTFIDLCRGPHLINAAPIASWW-VMDVSACIWNGDA-NKKMRRIRAITFPKKEQMTEHK 279

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEI 294
            FLEE+ KRDHRKL  ++ LF   E   G  F++ +G  +++ L+S +R++  K  + E+
Sbjct: 280 KFLEEAAKRDHRKLGTDLGLFFFHEWSPGCAFFYPEGCLMYRRLMSMIRQQYLKRQFVEV 339

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL----------------RTFALKP 338
            TP +    L++ SGHW  YR +MF  K  D    +                 R   +KP
Sbjct: 340 ITPNIFYDDLFKTSGHWAHYRDDMFHFKVDDGAPTEEELAAQDAKDPVAQKAVREMGMKP 399

Query: 339 MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE 398
           MNCPGH  VF   ++SY+E+P+R+AEFG ++RNE +G+L GL RVR F QDDAH+F   +
Sbjct: 400 MNCPGHCLVFRSKVRSYKEMPIRMAEFGVLHRNEATGALTGLTRVRRFVQDDAHIFARYD 459

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNS 458
           Q+  E     + +  +Y  FG E      +   EK +G   +W++A N+++  L   K  
Sbjct: 460 QIGEEISDGLDFMTEVYGYFGMELEFTLSTINMEKYMGDLKVWENATNMLRQALIDNKK- 518

Query: 459 SQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC 518
                N     GE AFYGPK + ++KD +GR  Q  TIQ+DF LP +F+  YV++  +  
Sbjct: 519 -----NFTEAPGEAAFYGPKIDVLVKDCLGRRHQLATIQLDFQLPEKFDLTYVDAELKPQ 573

Query: 519 HPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT---SSAVEYAQEIANLL 575
            PVMIHRAV GS+ERFI I IE+F G  P W+SP Q  +          ++Y +EI +++
Sbjct: 574 RPVMIHRAVLGSLERFIAIAIEHFAGKFPFWMSPRQICIIPQNMTKEGQMKYIKEIYDMM 633

Query: 576 KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
                ++E     E++N KI         + +I GD+E   RS+  R  G      V L 
Sbjct: 634 HLEGFAVEIADGPESMNKKIVNAFKMSNNVALIIGDREVESRSVAARWRGENAPTVVPLD 693

Query: 636 DAIPILTK 643
             +  +  
Sbjct: 694 QFMNQIRD 701


>gi|171920625|ref|ZP_02695822.2| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str.
           ATCC 33698]
 gi|188524282|ref|ZP_03004325.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str.
           ATCC 33696]
 gi|195867906|ref|ZP_03079904.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str.
           ATCC 33175]
 gi|198273446|ref|ZP_03205982.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str.
           ATCC 27816]
 gi|209554092|ref|YP_002284982.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str.
           ATCC 33699]
 gi|238065120|sp|B5ZC42|SYT_UREU1 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|171903344|gb|EDT49633.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str.
           ATCC 33698]
 gi|195660016|gb|EDX53396.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str.
           ATCC 33696]
 gi|195660383|gb|EDX53642.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str.
           ATCC 33175]
 gi|198249966|gb|EDY74746.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str.
           ATCC 27816]
 gi|209541593|gb|ACI59822.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str.
           ATCC 33699]
          Length = 580

 Score =  478 bits (1231), Expect = e-133,   Method: Composition-based stats.
 Identities = 210/583 (36%), Positives = 339/583 (58%), Gaps = 26/583 (4%)

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFS---SDELAQIEKKMQEI 129
           + HS AH++A A+   +P + +AIGP I++GFYYDF+   P +     +L +IEK+M++I
Sbjct: 8   LNHSAAHVLAMALTKFYPNLSLAIGPAIDEGFYYDFNLNDPNTSITPIDLLKIEKEMKKI 67

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
            A+   F  + +S+E+A++LF+     YK++I+E    K  +++Y  G+WFDLC+GPHV 
Sbjct: 68  AAQALTFDYEQVSYEQAKDLFK--NNKYKLDIIEENKNKP-LSIYHSGKWFDLCKGPHVE 124

Query: 190 STGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKL 249
           +T ++K   KL+ +AG+YWRGD+N   L RIYG A+N Q +L  YL  L+E ++RDHRK+
Sbjct: 125 NTKEIK-AIKLLNIAGSYWRGDANNDQLIRIYGVAFNDQAQLDAYLVDLQERKERDHRKI 183

Query: 250 AREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQ 307
            ++++LF        G+  W   G  I   +  ++   + + +++ + TP +    L++ 
Sbjct: 184 GKDLNLFTFNNLAGQGLPIWLPNGTIIKSQVQKFINEVEFQFNFDTVITPILGSIDLYKT 243

Query: 308 SGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGS 367
           SGHWD Y+ N+F+    D+         L+PM CP H  V+++ L+SYR LP+RL+E   
Sbjct: 244 SGHWDHYKDNIFSPVQIDN-----EVLILRPMTCPHHTLVYSNELRSYRSLPIRLSEHSI 298

Query: 368 VYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKL 427
           ++R E SG L G  RVR    +D HVFC  +Q+ +E +    +I    +  G +   + L
Sbjct: 299 LHRYESSGGLTGFERVREMILEDCHVFCRPDQIEHEVINAFKMIQEAQEGLGIKTFEIHL 358

Query: 428 STRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           S               +W+ ++N ++ +L         +I    ++GE AFYGPK ++ +
Sbjct: 359 SLNDPNDKEKYYDDPQMWEHSQNALRKMLKD------HKIPYKEMVGEAAFYGPKIDFQV 412

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           K  + R     TIQ+DF LP+RFN  Y+N ++E+  PVMIH  + G+ ER + I++E  K
Sbjct: 413 KTVLNRIITVSTIQLDFLLPNRFNLSYINENNEQSTPVMIHIGIIGTYERLLAILLEQTK 472

Query: 544 GNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
           G LPLWLSP+Q ++  +  +   +YA+E+   L+ H +    D RNE ++ KIRE  I+K
Sbjct: 473 GVLPLWLSPVQVVIIPVNENLHADYAKELNAKLRKHLVRSSLDLRNERLSKKIREAQIQK 532

Query: 603 IPIIIICGDKEASERS-IGIRRFGSTTTQKVSLLDAIPILTKE 644
           IP  I+ GD+E      +  RR+GS  T  VS+ D I +L  +
Sbjct: 533 IPYQIVVGDEEIKNDKMVTYRRYGSEETTTVSVDDFIKVLEND 575


>gi|225550529|ref|ZP_03771478.1| threonine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
 gi|225379683|gb|EEH02045.1| threonine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
          Length = 580

 Score =  478 bits (1231), Expect = e-133,   Method: Composition-based stats.
 Identities = 210/583 (36%), Positives = 340/583 (58%), Gaps = 26/583 (4%)

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFS---SDELAQIEKKMQEI 129
           + HS AH++A A+   +P + +AIGP I++GFYYDF+   P +     +L +IEK+M++I
Sbjct: 8   LNHSAAHVLAMALTKFYPNLSLAIGPAIDEGFYYDFNLNDPNTSITPIDLLKIEKEMKKI 67

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
            A+   F  + +S+E+A++LF+     YK++I+E    K ++++Y  G+WFDLC+GPHV 
Sbjct: 68  AAQALTFDYEQVSYEQAKDLFK--NNKYKLDIIEENKNK-SLSIYHSGKWFDLCKGPHVE 124

Query: 190 STGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKL 249
           +T ++K   KL+ +AG+YWRGD+N   L RIYG A+N Q +L  YL  L+E ++RDHRK+
Sbjct: 125 NTKEIK-AIKLLNIAGSYWRGDANNDQLIRIYGVAFNDQAQLDAYLVDLQERKERDHRKI 183

Query: 250 AREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQ 307
            ++++LF        G+  W   G  I   +  ++   + + +++ + TP +    L++ 
Sbjct: 184 GKDLNLFTFNNLAGQGLPIWLPNGTIIKSQVQKFINEVEFQFNFDTVITPILGSIDLYKT 243

Query: 308 SGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGS 367
           SGHWD Y+ N+F+    D+         L+PM CP H  V+++ L+SYR LP+RL+E   
Sbjct: 244 SGHWDHYKDNIFSPVQIDN-----EVLILRPMTCPHHTLVYSNELRSYRSLPIRLSEHSI 298

Query: 368 VYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKL 427
           ++R E SG L G  RVR    +D HVFC  +Q+ +E +    +I    +  G +   + L
Sbjct: 299 LHRYESSGGLTGFERVREMILEDCHVFCRPDQIEHEVINAFKMIQEAQEGLGIKTFEIHL 358

Query: 428 STRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           S               +W+ ++N ++ +L         +I    ++GE AFYGPK ++ +
Sbjct: 359 SLNDPNDKEKYYDDPQMWEHSQNALRKMLKD------HKIPYKEMVGEAAFYGPKIDFQV 412

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           K  + R     TIQ+DF LP+RFN  Y+N ++E+  PVMIH  + G+ ER + I++E  K
Sbjct: 413 KTVLNRIITVSTIQLDFLLPNRFNLSYINENNEQSTPVMIHIGIIGTYERLLAILLEQTK 472

Query: 544 GNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
           G LPLWLSP+Q ++  +  +   +YA+E+   L+ H +    D RNE ++ KIRE  I+K
Sbjct: 473 GVLPLWLSPVQVVIIPVNENLHADYAKELNAKLRKHLVRSSLDLRNERLSKKIREAQIQK 532

Query: 603 IPIIIICGDKEASERS-IGIRRFGSTTTQKVSLLDAIPILTKE 644
           IP  I+ GD+E      +  RR+GS  T  VS+ D I +L  +
Sbjct: 533 IPYQIVVGDEEIKNDKMVTYRRYGSEETTTVSVDDFIKVLEND 575


>gi|156934293|ref|YP_001438208.1| hypothetical protein ESA_02124 [Cronobacter sakazakii ATCC BAA-894]
 gi|156532547|gb|ABU77373.1| hypothetical protein ESA_02124 [Cronobacter sakazakii ATCC BAA-894]
          Length = 453

 Score =  478 bits (1231), Expect = e-132,   Method: Composition-based stats.
 Identities = 226/461 (49%), Positives = 316/461 (68%), Gaps = 13/461 (2%)

Query: 193 QVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLARE 252
           +    FKLMK AGAYWRGDS+  ML RIYGTAW  ++ L  YL  LEE+ KRDHRK+ ++
Sbjct: 2   RFCHHFKLMKTAGAYWRGDSSNKMLQRIYGTAWADKKALNAYLQRLEEAAKRDHRKIGKQ 61

Query: 253 MDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHW 311
           +DL+H+ E+  G++FWH  GW IF+ L +++R K+K+  Y+E+  P ++D+ LW+++GHW
Sbjct: 62  LDLYHMQEEAPGMVFWHNDGWTIFRELETFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHW 121

Query: 312 DSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRN 371
           D+Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+AEFGS +RN
Sbjct: 122 DNYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRN 175

Query: 372 EPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP 431
           EPSG+LHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  FGFEKI+VKLSTRP
Sbjct: 176 EPSGALHGLMRVRGFTQDDAHIFCTEEQVRDEVNSCIRMVYDMYSTFGFEKIVVKLSTRP 235

Query: 432 EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDW 491
           EKR+G+D +WD AE  +   L+      ++ I      GEGAFYGPK E+ L D + R W
Sbjct: 236 EKRIGTDEMWDRAEADLAVALE------ENNIPFEYQPGEGAFYGPKIEFTLYDCLDRAW 289

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLS 551
           QCGT+Q+DF+LPSR +A YV  ++E+  PVMIHRA+ GS+ERFIGI+ E F G  P WL+
Sbjct: 290 QCGTVQLDFSLPSRLSASYVGENNERQVPVMIHRAILGSMERFIGILTEEFAGFFPTWLA 349

Query: 552 PIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
           P+Q +V  IT S  EY  E+   L++  + ++ D RNE I +KIREH+++++P +++CGD
Sbjct: 350 PVQVVVMNITDSQSEYVNELTRKLQNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGD 409

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           KE     + +R         + + D I  L +E      Q+
Sbjct: 410 KEVEAGKVAVRTRRGKDLGSLDVNDVIEKLQQEIRSRSLQQ 450


>gi|313633110|gb|EFS00008.1| threonyl-tRNA synthetase [Listeria seeligeri FSL N1-067]
          Length = 485

 Score =  478 bits (1230), Expect = e-132,   Method: Composition-based stats.
 Identities = 198/493 (40%), Positives = 302/493 (61%), Gaps = 19/493 (3%)

Query: 159 VEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLS 218
           +E++E+IPA E VT+Y QGE+FDLCRG HV STG+++ F KL+ VAGAYWRGDSN  ML 
Sbjct: 1   LELIEAIPADETVTIYTQGEFFDLCRGVHVPSTGKIQVF-KLLSVAGAYWRGDSNNKMLQ 59

Query: 219 RIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQ 277
           RIYGTA+  +  L +++   +E+++RDHRKL +E++LF  + +   G+  W  KG  I +
Sbjct: 60  RIYGTAFFDKNGLKEFIQMQKEAKERDHRKLGKELELFTNSIEVGQGLPLWLPKGATIRR 119

Query: 278 TLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFAL 336
            +  Y+  K +   Y  + TP + +  L++ SGHWD Y  +MF     D+         L
Sbjct: 120 VIERYIVDKEERLGYNHVYTPIMANVELYKTSGHWDHYHEDMFPTMKMDN-----EELVL 174

Query: 337 KPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT 396
           +PMNCP H+ ++ + + SYRELP+R+AE G ++R E SG+L GL RVRG T +DAHVF  
Sbjct: 175 RPMNCPHHMMIYKNDIHSYRELPIRIAELGMMHRYEMSGALSGLQRVRGMTLNDAHVFVR 234

Query: 397 KEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVL 452
            +Q+ +E  ++  LI+ +YKDF  +    +LS R  K        DA+WD A+ ++K  +
Sbjct: 235 PDQIKDEFKRVVELILEVYKDFDIKDYSFRLSYRDPKNTEKYFDDDAMWDKAQAMLKSAM 294

Query: 453 DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
           D +       ++     GE AFYGPK +  +K AIG++    T+Q+DF LP RF+  Y+ 
Sbjct: 295 DEMG------MDYFEADGEAAFYGPKLDVQVKTAIGKEETLSTVQLDFLLPERFDLTYIG 348

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEI 571
              EK  PV+IHR V  ++ERF+  +IE +KG  P WL+P+Q  +  +   + ++YA+ +
Sbjct: 349 EDGEKHRPVVIHRGVVSTMERFVAYLIEEYKGAFPTWLAPVQMELIPVNADAHLDYAKGV 408

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
            + L+   L +E D RNE + YKIRE   KKIP  ++ GD+E    ++ +RR+GS  ++ 
Sbjct: 409 QDKLQRAGLRVEVDDRNEKLGYKIREAQTKKIPYALVLGDQEMESGTVNVRRYGSKDSET 468

Query: 632 VSLLDAIPILTKE 644
           + L   I  + +E
Sbjct: 469 MELDTFISQVVQE 481


>gi|185179115|ref|ZP_02964840.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str.
           ATCC 27817]
 gi|188024051|ref|ZP_02996803.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str.
           ATCC 27819]
 gi|188518364|ref|ZP_03003871.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str.
           ATCC 33695]
 gi|225551314|ref|ZP_03772260.1| threonine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
 gi|184209012|gb|EDU06055.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str.
           ATCC 27817]
 gi|188019085|gb|EDU57125.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str.
           ATCC 27819]
 gi|188998237|gb|EDU67334.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str.
           ATCC 33695]
 gi|225379129|gb|EEH01494.1| threonine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
          Length = 580

 Score =  478 bits (1229), Expect = e-132,   Method: Composition-based stats.
 Identities = 210/583 (36%), Positives = 339/583 (58%), Gaps = 26/583 (4%)

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFS---SDELAQIEKKMQEI 129
           + HS AH++A A+   +P + +AIGP I++GFYYDF+   P +     +L +IEK+M++I
Sbjct: 8   LNHSAAHVLAMALTKFYPNLSLAIGPAIDEGFYYDFNLNDPNTSITPIDLLKIEKEMKKI 67

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
            A+   F  + +S+E+A++LF+     YK++I+E    K  +++Y  G+WFDLC+GPHV 
Sbjct: 68  AAQALTFDYEQVSYEQAKDLFK--NNKYKLDIIEENKNKP-LSIYHSGKWFDLCKGPHVE 124

Query: 190 STGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKL 249
           +T ++K   KL+ +AG+YWRGD+N   L RIYG A+N Q +L  YL  L+E ++RDHRK+
Sbjct: 125 NTKEIK-AIKLLNIAGSYWRGDANNDQLIRIYGVAFNDQAQLDAYLVDLQERKERDHRKI 183

Query: 250 AREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQ 307
            ++++LF        G+  W   G  I   +  ++   + + +++ + TP +    L++ 
Sbjct: 184 GKDLNLFTFNNLAGQGLPIWLPNGTIIKSQVQKFINEVEFQFNFDTVITPILGSIDLYKT 243

Query: 308 SGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGS 367
           SGHWD Y+ N+F+    D+         L+PM CP H  V+++ L+SYR LP+RL+E   
Sbjct: 244 SGHWDHYKDNIFSPVQIDN-----EVLILRPMTCPHHTLVYSNELRSYRSLPIRLSEHSI 298

Query: 368 VYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKL 427
           ++R E SG L G  RVR    +D HVFC  +Q+ +E +    +I    +  G +   + L
Sbjct: 299 LHRYESSGGLTGFERVREMILEDCHVFCRPDQIEHEVINAFKMIQEAQEGLGIKTFEIHL 358

Query: 428 STRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           S               +W+ ++N ++ +L         +I    ++GE AFYGPK ++ +
Sbjct: 359 SLNDPNDKEKYYDDPQMWEHSQNTLRKMLKD------HKIPYKEMVGEAAFYGPKIDFQV 412

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           K  + R     TIQ+DF LP+RFN  Y+N ++E+  PVMIH  + G+ ER + I++E  K
Sbjct: 413 KTVLNRIITVSTIQLDFLLPNRFNLSYINENNEQSTPVMIHIGIIGTYERLLAILLEQTK 472

Query: 544 GNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
           G LPLWLSP+Q ++  +  +   +YA+E+   L+ H +    D RNE ++ KIRE  I+K
Sbjct: 473 GVLPLWLSPVQVVIIPVNENLHADYAKELNAKLRKHLVRSSLDLRNERLSKKIREAQIQK 532

Query: 603 IPIIIICGDKEASERS-IGIRRFGSTTTQKVSLLDAIPILTKE 644
           IP  I+ GD+E      +  RR+GS  T  VS+ D I +L  +
Sbjct: 533 IPYQIVVGDEEIKNDKMVTYRRYGSEETTTVSVDDFIKVLEND 575


>gi|259502210|ref|ZP_05745112.1| threonine-tRNA ligase [Lactobacillus antri DSM 16041]
 gi|259169828|gb|EEW54323.1| threonine-tRNA ligase [Lactobacillus antri DSM 16041]
          Length = 600

 Score =  477 bits (1228), Expect = e-132,   Method: Composition-based stats.
 Identities = 187/597 (31%), Positives = 320/597 (53%), Gaps = 22/597 (3%)

Query: 56  EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPF 114
           +GS++ I  +    L  +R   + ++ +++   +  +++      EDGF+ D DK+ Q  
Sbjct: 10  DGSVKKIDRDSEEGLQALRKLASLLLKDSLHQEFKGIRLGESVADEDGFHVDSDKDDQQV 69

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
           S+DEL+ ++  +      D+         + A    E K + Y  E+++       V +Y
Sbjct: 70  SADELSALQDALLAKAK-DAKVEFVEADLDDALA--EVKDDPYSSELIKEAAKDGKVAMY 126

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
           + G+         +   G   K  KL+ VAGAYW+G S+ PML R+YGT + ++  L + 
Sbjct: 127 QVGD-VKAVADGDIMVYGDAIKHLKLLSVAGAYWKGMSSNPMLQRVYGTVFFSKDALDED 185

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYE 292
           +   +E+ + DHR +  ++DLF +      G+ +W  KG  I +T+  Y+  R++ D YE
Sbjct: 186 MKKRQEAREHDHRVIGNQLDLFFVDPKVGAGLPYWMPKGATIRRTIERYIIDREVADGYE 245

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
            + TP +++   ++ SGHW+ YR +MF          D     ++PMNCP H+ ++ H +
Sbjct: 246 HVYTPVLMNLDAYKTSGHWEHYRDDMFPPMDMG----DGEMLEIRPMNCPSHIQIYKHHI 301

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
           +SYR+LP+R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  KI NLI+
Sbjct: 302 RSYRDLPMRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVAVDQIRDEFAKILNLIM 361

Query: 413 SIYKDFGFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
            +YKDF       +LS R  K      G+D +WD+++ ++K  +D +       ++    
Sbjct: 362 DVYKDFDITDYSFRLSLRDPKNKEKYYGNDEMWDESQKLLKAAMDDLN------LDYYEA 415

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
            GE AFYGPK +   K A+G D    TIQ+DF  P RF   YV    ++  PVMIHR + 
Sbjct: 416 EGEAAFYGPKLDIQTKTALGNDETMSTIQLDFMQPDRFGLSYVGKDGKEHMPVMIHRGIV 475

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFR 587
           G++ERF+  + E +KG  P WL+P Q  +  ++     +YA+++A+ +K+  + +  D R
Sbjct: 476 GTMERFVAYLTEIYKGAFPTWLAPEQVHIIPVSDEKHGDYAKQLADKMKAAQIRVVVDDR 535

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           NE + YKIRE   +K+P  ++ GD E  + ++ +R++G      +S    +  +  +
Sbjct: 536 NEKMGYKIREAQTQKVPYTLVVGDDEVKDNAVSVRKYGEEAQNSMSQDAFMNEILAD 592


>gi|195035423|ref|XP_001989177.1| GH11579 [Drosophila grimshawi]
 gi|193905177|gb|EDW04044.1| GH11579 [Drosophila grimshawi]
          Length = 493

 Score =  476 bits (1225), Expect = e-132,   Method: Composition-based stats.
 Identities = 195/495 (39%), Positives = 287/495 (57%), Gaps = 16/495 (3%)

Query: 151 ESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRG 210
             K   +KV IL      +  T+Y+ G   DLCRGPHVR TG+VK   K+ K +  YW G
Sbjct: 1   MFKYNEFKVRILNEKVTTDRTTVYKCGSLIDLCRGPHVRHTGKVK-ALKITKNSSTYWEG 59

Query: 211 DSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHR 270
            ++   L R+YG ++   ++L ++    EE+ KRDHRK+ RE +LF   E   G  F+  
Sbjct: 60  KADAESLQRVYGISFPDPKQLKEWEKLQEEAAKRDHRKIGREQELFFFHELSPGSCFFQP 119

Query: 271 KGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
           +G  I+ TL++ +R + +   ++E+ +P + +  LW  SGHW  Y  NMF+ +       
Sbjct: 120 RGAHIYNTLMNLIRGEYRKRGFQEVISPNIYNAKLWMTSGHWQHYADNMFSFE------A 173

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
           +   FALKPMNCPGH  +F++  +S+RELP+R+A+FG ++RNE SG+L GL RVR F QD
Sbjct: 174 EKEKFALKPMNCPGHCLIFDNRNRSWRELPLRMADFGVLHRNELSGALTGLTRVRRFQQD 233

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMK 449
           DAH+FC  EQ+ +E     + +  +Y  FGF   +V LSTRPE+ +G    WD AE  + 
Sbjct: 234 DAHIFCAPEQIKSEMKGCLDFLRHVYTIFGFSFQLV-LSTRPEQYLGELEQWDAAEKALA 292

Query: 450 GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAF 509
             LD      ++        G+GAFYGPK +  + DA+ R +QC TIQ+DF LP RFN  
Sbjct: 293 ESLDEFGMPWKE------NHGDGAFYGPKIDITIMDALKRPFQCATIQLDFQLPIRFNLN 346

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQ 569
           Y+    EK  PV+IHRA+ GS+ER I I+ EN+ G  P WLSP Q +V  +  +  EYA+
Sbjct: 347 YIADDGEKKRPVIIHRAILGSVERMIAILTENYAGKWPFWLSPRQVMVVPVGPAYDEYAK 406

Query: 570 EIANLLKSHHLSIETD-FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
            + + L +     E+D    +T+N KIR   + +   I++ GDKE S  ++ +R   +  
Sbjct: 407 SVRDQLYAAGFMSESDCDAGDTMNKKIRNAQLAQFNFILVVGDKERSSNTVNVRTRDNKV 466

Query: 629 TQKVSLLDAIPILTK 643
             +VS+ + I  L K
Sbjct: 467 HGEVSVAELISKLQK 481


>gi|227872012|ref|ZP_03990397.1| threonine--tRNA ligase [Oribacterium sinus F0268]
 gi|227842155|gb|EEJ52400.1| threonine--tRNA ligase [Oribacterium sinus F0268]
          Length = 627

 Score =  476 bits (1225), Expect = e-132,   Method: Composition-based stats.
 Identities = 229/622 (36%), Positives = 344/622 (55%), Gaps = 49/622 (7%)

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           +    L   RHS AHI+A+A+  ++ PEVQ AIGP IEDG YYDF   +  S ++   IE
Sbjct: 4   DKQEFLERYRHSLAHILAKAMVELYGPEVQYAIGPQIEDGCYYDFALPKSLSEEDFKTIE 63

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE-WFDL 182
            KM+EII R   + ++ LS E A  L    K+ +K E+++ +PA E +++YR G+ + DL
Sbjct: 64  DKMREIIKRREDWTREELSREAALAL--FDKQKFKKELIQDLPADEVISIYRTGDDFVDL 121

Query: 183 CRGPHVRSTGQ-VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           CRGPHV ++ + +   F++  ++GAYWRGD +R  L R+Y  A+  +  L ++L +L+E+
Sbjct: 122 CRGPHVENSQELMNVAFQIKSISGAYWRGDEHRDQLQRVYLFAYPDKIALKEHLKWLQEA 181

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           ++RDH+KL  ++DLF   E   G+ +W  +GWK++Q L++Y R  + K  Y EI+ P + 
Sbjct: 182 QERDHKKLGSQLDLFMFDETAPGMPYWLPRGWKMYQALLAYSRSVQAKHGYTEISAPLIN 241

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT--------------------------- 333
           ++ LW  SGHW  Y  NMF V      +K                               
Sbjct: 242 NKKLWLISGHWAHYINNMFMVPGISGWLKADADLSGVLEHPTDASLGEKIVKIQAGSVIY 301

Query: 334 -------FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
                   A KPMNCP  +  +    +SY+ELP+R +E+  ++R E SG ++GL RV+ F
Sbjct: 302 NRENIDTMAAKPMNCPNAMITYKRRNRSYKELPIRYSEYDVLHRKEKSGQMNGLFRVQEF 361

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
            QDD H F  + Q+  E   I ++   +YK FG      +LSTRP+  +G   +WD AE 
Sbjct: 362 RQDDDHTFVMESQIEAEIADIISIADEVYKTFGVTY-RAELSTRPDDFMGDIEVWDRAEA 420

Query: 447 IMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF 506
            +K +L              +  G+GAFYGPK +  +KDA+GR+WQCGTIQ+DF LP  F
Sbjct: 421 ALKKILTDKYGEGG----FEINEGDGAFYGPKIDLQIKDALGREWQCGTIQLDFQLPHNF 476

Query: 507 NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVE 566
              Y  +      PV+IHRA++GS+ERFIGI+IENFKG+ P WLSP Q  +  I     +
Sbjct: 477 GLTYQTAEGSTAMPVVIHRAIYGSLERFIGIIIENFKGSFPFWLSPEQVGIVPIREEHND 536

Query: 567 YAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG- 625
           Y ++I   L    +  E D+ ++ +  KI+ +   K P I++ GDKE  E+++ I   G 
Sbjct: 537 YGKKIYEALSDMGIRAEIDYSDKNMKEKIKTYKNYKNPYILVLGDKEMEEKAVSINMRGS 596

Query: 626 STTTQKVSLLDAI---PILTKE 644
           +     V L   +     + KE
Sbjct: 597 NKQINNVPLDAFLKACERMQKE 618


>gi|256848462|ref|ZP_05553904.1| threonyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
 gi|256714729|gb|EEU29708.1| threonyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
          Length = 601

 Score =  476 bits (1225), Expect = e-132,   Method: Composition-based stats.
 Identities = 196/597 (32%), Positives = 318/597 (53%), Gaps = 21/597 (3%)

Query: 56  EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPF 114
            G +  I  +   S A +R   A ++   +   +  +++      +D F+ D DK+ Q  
Sbjct: 10  NGEVNKIDKDSAESAAALRQMAALMLKAVLADKYDGIRLGDAVAEDDQFWVDSDKDDQQV 69

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
           S+DEL  +E  ++++   D+           A    +   + +  E++        V +Y
Sbjct: 70  SADELEGLEADIKKLAKNDAKVEFVERDVNDALADVK--NDKFSTELINDHAKNGKVAMY 127

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
             G  + +   P +   G V K FKL+ VAGAYW+G S+ PML RIYGTA+  + +L + 
Sbjct: 128 NLGNAYAVAEAP-ILVYGDVVKNFKLLSVAGAYWKGMSSNPMLQRIYGTAFYKKDDLAED 186

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYE 292
           L   +E+++RDHR +  ++DLF +      G+ +W  KG  I +T+  Y+  R++ D YE
Sbjct: 187 LKKRQEAKERDHRVIGNQLDLFFVDPKVGAGLPYWLPKGAAIRRTIERYIIDREVADGYE 246

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
            + TP +++   ++ SGHW+ YR +MF          D     L+PMNCP H+ V+ H L
Sbjct: 247 HVYTPVLMNLDAYKTSGHWEHYRDDMFPPMDMG----DGEMLELRPMNCPSHIQVYKHHL 302

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
           +SYR+LP+R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  KI  LI+
Sbjct: 303 RSYRDLPLRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQIRSEFAKILKLIM 362

Query: 413 SIYKDFGFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
           S+YKDF       +LS R  K       +D +W+ +++++K  +D +       ++    
Sbjct: 363 SVYKDFDITDYSFRLSLRDPKNVKKYYANDEMWEKSQSMLKQAMDDLS------LDYYEA 416

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
            GE AFYGPK +   K A+G D    TIQ+DF LP RF   YV    ++  PVMIHR V 
Sbjct: 417 EGEAAFYGPKLDIQTKTALGNDETMSTIQLDFMLPERFGLTYVGKDGQEHMPVMIHRGVV 476

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFR 587
           G++ERF+  + E +KG  P WL+P Q  +  ++     +YA ++   L++  + +  D R
Sbjct: 477 GTMERFVAYLTEIYKGAFPTWLAPEQVHIIPVSDDKHGDYADQLGAELRAAKIRVNVDHR 536

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           NE + YKIRE   +K+P  ++ GD E +  S+ +R++G      +S  D +  L  +
Sbjct: 537 NEKMGYKIREAQTQKVPYTLVVGDDEMANGSVSVRKYGEKEQNSMSKQDFMDELLAD 593


>gi|313637683|gb|EFS03062.1| threonyl-tRNA synthetase [Listeria seeligeri FSL S4-171]
          Length = 483

 Score =  476 bits (1225), Expect = e-132,   Method: Composition-based stats.
 Identities = 197/491 (40%), Positives = 300/491 (61%), Gaps = 19/491 (3%)

Query: 161 ILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRI 220
           ++E+IPA E VT+Y QGE+FDLCRG HV STG+++ F KL+ VAGAYWRGDSN  ML RI
Sbjct: 1   LIEAIPADETVTIYTQGEFFDLCRGVHVPSTGKIQVF-KLLSVAGAYWRGDSNNKMLQRI 59

Query: 221 YGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTL 279
           YGTA+  +  L +++   +E+++RDHRKL +E++LF  + +   G+  W  KG  I + +
Sbjct: 60  YGTAFFDKNGLKEFIQMQKEAKERDHRKLGKELELFTNSIEVGQGLPLWLPKGATIRRVI 119

Query: 280 ISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKP 338
             Y+  K +   Y  + TP + +  L++ SGHWD Y  +MF     D+         L+P
Sbjct: 120 ERYIVDKEERLGYNHVYTPIMANVELYKTSGHWDHYHEDMFPTMKMDN-----EELVLRP 174

Query: 339 MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE 398
           MNCP H+ ++ + + SYRELP+R+AE G ++R E SG+L GL RVRG T +DAHVF   +
Sbjct: 175 MNCPHHMMIYKNDIHSYRELPIRIAELGMMHRYEMSGALSGLQRVRGMTLNDAHVFVRPD 234

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDT 454
           Q+ +E  ++  LI+ +YKDF  +    +LS R  K        DA+WD A+ ++K  +D 
Sbjct: 235 QIKDEFKRVVELILEVYKDFDIKDYSFRLSYRDPKNTEKYFDDDAMWDKAQAMLKSAMDE 294

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH 514
           +       ++     GE AFYGPK +  +K AIG++    T+Q+DF LP RF+  Y+   
Sbjct: 295 MG------MDYFEADGEAAFYGPKLDVQVKTAIGKEETLSTVQLDFLLPERFDLTYIGED 348

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIAN 573
            EK  PV+IHR V  ++ERF+  +IE +KG  P WL+P+Q  +  +   + ++YA+ + +
Sbjct: 349 GEKHRPVVIHRGVVSTMERFVAYLIEEYKGAFPTWLAPVQMELIPVNADAHLDYAKGVQD 408

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            L+   L +E D RNE + YKIRE   KKIP  ++ GD+E    ++ +RR+GS  ++ + 
Sbjct: 409 KLQRAGLRVEVDDRNEKLGYKIREAQTKKIPYALVLGDQEMESGTVNVRRYGSKDSETME 468

Query: 634 LLDAIPILTKE 644
           L   I  + +E
Sbjct: 469 LDTFISQVVQE 479


>gi|302671729|ref|YP_003831689.1| threonyl-tRNA synthetase ThrZ [Butyrivibrio proteoclasticus B316]
 gi|302396202|gb|ADL35107.1| threonyl-tRNA synthetase ThrZ [Butyrivibrio proteoclasticus B316]
          Length = 634

 Score =  476 bits (1225), Expect = e-132,   Method: Composition-based stats.
 Identities = 229/619 (36%), Positives = 339/619 (54%), Gaps = 46/619 (7%)

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWP-EVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
                 L V RHS AH++A+AV  ++  EVQ AIGP I+DG YYDF   +  + D+   I
Sbjct: 8   MNKEEFLEVYRHSMAHVLAKAVIELYGKEVQYAIGPQIDDGCYYDFVLPKAVTQDDFKTI 67

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE-WFD 181
           E KM+EII R   + ++ +S  +A E+F+   + +K E++  +P  E +T+Y  G+ + D
Sbjct: 68  EDKMREIIKRREDWTRKEVSKSEALEMFK--DQKFKTELINDLPEDEVITVYYTGDDYVD 125

Query: 182 LCRGPHVRSTGQVKKF-FKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           LCRGPHV ++ ++    +++  V+GAYWRGD  R  LSRIY  A+ ++ EL  ++  ++E
Sbjct: 126 LCRGPHVDNSQELMNVSYQIKSVSGAYWRGDEKRDQLSRIYLYAFPSKDELKHHIKMIQE 185

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           + +RDH+K+  E+DLF   E   G+ +W  +GWK++Q L+ Y R  + +  Y EI  P V
Sbjct: 186 ALERDHKKIGAELDLFMFDETAPGMPYWLPRGWKMYQALLKYSREIQERHGYTEIAAPLV 245

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT-------------------------- 333
            ++ LW  SGHW  Y  NMF V      +K                              
Sbjct: 246 NNKKLWLISGHWAHYVNNMFMVPGVSGWLKADAEIPGILENNNDPTEEPKNIKIQAGSVI 305

Query: 334 --------FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRG 385
                    A KPMNCP  +  +     SY+ELP+R +E+  ++R E SG ++GL RV+ 
Sbjct: 306 YNREQNDTMAAKPMNCPNAMMTYKRTNHSYKELPIRYSEYDVLHRKEKSGQMNGLFRVQE 365

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
           F QDD H F  + Q+  E   +  +   IY  FG      +LSTRPE  +G   +W+ AE
Sbjct: 366 FRQDDDHTFVMESQIKEEIADVIAIADEIYSTFGVTY-RAELSTRPEDFMGDIEVWNRAE 424

Query: 446 NIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSR 505
             +K +LD             +  G+GAFYGPK +  +KDA+GR+WQCGT+Q+DF LP  
Sbjct: 425 AALKEILDEKYGEGG----YEINEGDGAFYGPKIDLQIKDALGREWQCGTVQLDFQLPHN 480

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAV 565
           F   Y         PV+IHRA++GS+ERFIGI+IENFKG  P WLSP Q  +  I     
Sbjct: 481 FGLTYQAQDGTMQMPVVIHRAIYGSLERFIGIIIENFKGVFPFWLSPYQVGIVPIRLEHN 540

Query: 566 EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
           EYA+E+   L +  + +E D+ +  +  KI++    K P I++ GDKEA+ER++ I   G
Sbjct: 541 EYAKEVEQALMNAGIRVEADYSDNNMKEKIKKFKNYKDPYILVVGDKEAAERTVSINVRG 600

Query: 626 -STTTQKVSLLDAIPILTK 643
            +   Q V L   + +  K
Sbjct: 601 SNKQVQNVPLDALVAMCKK 619


>gi|167957086|ref|ZP_02544160.1| threonyl-tRNA synthetase [candidate division TM7 single-cell
           isolate TM7c]
          Length = 603

 Score =  476 bits (1224), Expect = e-132,   Method: Composition-based stats.
 Identities = 218/609 (35%), Positives = 338/609 (55%), Gaps = 51/609 (8%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQIEK 124
               L  +RHS AHIMA+AVQ +WP+ +  +GP IE+GFYYD   +    S D L +IEK
Sbjct: 2   SEDELKSMRHSLAHIMAQAVQRLWPQAKFGVGPAIENGFYYDIYLDGATISEDSLPKIEK 61

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-------------- 170
           +M++II+ + PF ++ ++ ++A +  +  ++ +K+E+L  +                   
Sbjct: 62  EMRKIISANYPFERRDVAIDEAIDWAKENQQNFKIELLNDLKRSGTTVASELSGEDIGSA 121

Query: 171 ---------VTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIY 221
                    V+LY QG++ DLCRG HV STG+V  F KL KVAGAYWRG+ N   + RIY
Sbjct: 122 NEAPSKVKAVSLYSQGDYVDLCRGGHVDSTGKVGAF-KLTKVAGAYWRGNENNLQMQRIY 180

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLI 280
           G A+ TQ+EL +YL  +E +++RDHRKL R++DL+  +   G G+  +  +G  + + + 
Sbjct: 181 GVAFATQEELDEYLENIEIAKQRDHRKLGRDLDLYTTSPLVGVGLPLFTPRGTILREVMS 240

Query: 281 SYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPM 339
            Y  + + K  +E++ TP +  + L+++SGHW  +   +F VK  + +       ALKPM
Sbjct: 241 QYSNQLRQKFGFEKVWTPHITKKDLYEKSGHWAKFGEELFLVKSQETSD----EMALKPM 296

Query: 340 NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQ 399
           NCP H  +F    +SYR++PVR  E  + YR+E +G L GL RVR  TQDD+HVFC  +Q
Sbjct: 297 NCPHHTQIFASRPRSYRDMPVRYLETTTDYRDEKTGELGGLSRVRSLTQDDSHVFCRPDQ 356

Query: 400 MFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK--RVGSDALWDDAENIMKGVLDTIKN 457
           +  E   + +    +Y+     K+ V+LS R +    +G   LWD A+  +K  ++ +  
Sbjct: 357 IEEEINNLLSAARELYESID-MKLRVRLSYRDDSDSYLGDIDLWDSAQGQLKSAVERVG- 414

Query: 458 SSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK 517
                ++     GE AFYGPK +++  DAIGR+ Q  T+Q+DF  P RF   YV+ +   
Sbjct: 415 -----LDYFEQEGEAAFYGPKIDFMATDAIGREHQVATVQLDFVQPQRFGLEYVDINGNS 469

Query: 518 CHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKS 577
             PVM+H A+ GSIERF+ + IE+  G  P W +P Q  + TI  S + Y  +I  +L  
Sbjct: 470 TTPVMVHCALLGSIERFLSVFIEHTGGWFPFWAAPEQVRILTINDSVLGYVDKITTILSE 529

Query: 578 ---------HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
                    + +   +D RNE++  KIRE +  KIP+ +I G K+     + IR      
Sbjct: 530 TTLTKPVKYNDVRFTSDIRNESLGKKIREATSMKIPVQLIVGPKDMEAGEVSIRTQAGEE 589

Query: 629 TQKVSLLDA 637
             K+ L + 
Sbjct: 590 --KIPLENL 596


>gi|83859100|ref|ZP_00952621.1| threonyl-tRNA synthetase [Oceanicaulis alexandrii HTCC2633]
 gi|83852547|gb|EAP90400.1| threonyl-tRNA synthetase [Oceanicaulis alexandrii HTCC2633]
          Length = 613

 Score =  476 bits (1224), Expect = e-132,   Method: Composition-based stats.
 Identities = 213/606 (35%), Positives = 324/606 (53%), Gaps = 44/606 (7%)

Query: 71  AVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEII 130
              RHS AH+MA A++ +WP  +  +GP    GFYYD   E+P + ++L +IEK+M+E+ 
Sbjct: 9   ETRRHSAAHLMAAAIKDLWPNAKFGVGPATATGFYYDIQLEEPLTVEDLPKIEKRMKELR 68

Query: 131 ARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-------------------ENV 171
            +   F  +    ++A +    + + +KVE+L+ +  K                   + +
Sbjct: 69  KKKKKFYCEAHGIDEAIDYMAKEGQDFKVELLKLLRDKGSTAIAKETGDESVAGEGLDEI 128

Query: 172 TLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQEL 231
           T YR G++ DLCRGPHV  +GQV +F KL  +AGAYWRGD+N   L RI+  A+ T++EL
Sbjct: 129 TFYRTGDFVDLCRGPHVDHSGQVGEF-KLRSIAGAYWRGDANNAQLQRIHALAFETKEEL 187

Query: 232 TQYLYFLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMR-RKIKD 289
              +  LEE  KRDHRK+ +E+ LF + E+   G+  W   G  I   L    R  + + 
Sbjct: 188 EAEVTRLEEQAKRDHRKIGKELGLFTLVEEVGAGLPMWLPAGNVIRDELEKLARITEHRA 247

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
            Y+ ++TP +    L+ +SGH   Y  +M+A    D+     + + L+PMNCP H  ++ 
Sbjct: 248 GYKRVSTPHITKGDLYHRSGHLPYYAEDMYAPIMIDE-----QEYYLRPMNCPHHHMIYA 302

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
           H   SYR+LPVRL+E+G VYR E SG L GLMRVRGF Q+DAH++C  +Q  +E L + +
Sbjct: 303 HDQWSYRDLPVRLSEYGQVYRYEASGGLSGLMRVRGFCQNDAHIYCRPDQAKDEFLAVMH 362

Query: 410 LIISIYKDFGFEKIMVKLS----TRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
           +    Y+ FG +   ++LS       +K V     W  A +I+K  +D      ++    
Sbjct: 363 MHADYYRLFGIQDFWMRLSLPDMENLDKYVDDAEGWKTALSILKQAMDESGYPYKE---- 418

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
             + GE AFYGPK ++++K  +G ++   T Q+DF    RFN  Y      K    +IHR
Sbjct: 419 --VEGEAAFYGPKVDFMVKSVVGTEYAISTNQLDFMATKRFNLVYTAEDGSKQPVYVIHR 476

Query: 526 AVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLK-------SH 578
           A  GS ERF   +IE++ G  P WLSP QA+V  I     EYAQ + + L        + 
Sbjct: 477 APMGSHERFAAFLIEHYAGKFPTWLSPTQAVVIPIADRHEEYAQTVRDQLFFSEVDSVNT 536

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
            +  ETDF +E +  KIR    ++IP +++ GD EA    + +R         + + D I
Sbjct: 537 GIRTETDFASERMQKKIRNAQHRQIPYMLVVGDAEAENGEVAVRHRDHGDMGTMKVEDLI 596

Query: 639 PILTKE 644
             + KE
Sbjct: 597 ARIAKE 602


>gi|313665156|ref|YP_004047027.1| threonine--tRNA ligase [Mycoplasma leachii PG50]
 gi|312949904|gb|ADR24500.1| threonine--tRNA ligase [Mycoplasma leachii PG50]
          Length = 639

 Score =  475 bits (1223), Expect = e-132,   Method: Composition-based stats.
 Identities = 186/648 (28%), Positives = 318/648 (49%), Gaps = 22/648 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           +K+   DGSIK +    +  D++  I     K  +   IN ++ D++  ++ + S+E+IT
Sbjct: 1   MKIKLLDGSIKEYNQEISVKDISLEIGL---KNVIGAKINDQLFDINYLIKNDCSLELIT 57

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV-AIGPIIEDGFYYDFDKEQPFSSDELAQI 122
            +      ++  + A I + A+ ++ P  Q        E  F   FD       D+L  I
Sbjct: 58  NKSKEYDLMLNLTAAFITSYAINNLKPISQAENFYNADEMEFSTTFDTNPRLVLDDLKNI 117

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           +  + +++  +           KA E+     +  K    +       V +Y   +++ +
Sbjct: 118 QTNINQLLTSNLEIKSHIYDLNKALEI--LNNDYQKYLAKQMYEKYHYVKVYSINDFYMV 175

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
                + +   +K    + ++ G+YW  D N  ML R +G    +  EL      LE+  
Sbjct: 176 INNALILNPNFIK-VIDIEQLTGSYWLNDKNNIMLQRAHGLCATSNSELKNKKVILEDRR 234

Query: 243 KRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
            RDHR + + +++F      G+G+  W   G+ +   +  Y+R+K  + DY  + TP + 
Sbjct: 235 SRDHRLINKTLNIFGFDQLVGAGLPLWLPNGFIVKNEIEKYLRQKEWEYDYIPVETPPIG 294

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
              L++ SGHWD Y  +M   +  +        F L+PMNCP H+AV+    +SYR+LP+
Sbjct: 295 TVELYKTSGHWDHYGEDM--FQPFNGGKGSDEQFILRPMNCPHHIAVYKQEQRSYRDLPL 352

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+ E    +R E SGSL GL RVRG    D+H+F   +Q+ +E    + LI  + K F  
Sbjct: 353 RICEHAIQHRFESSGSLTGLERVRGMKLTDSHIFVRSDQIEDEFRSTYKLISEVLKTFNI 412

Query: 421 EKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           +   + LS R           D +WD AE+ ++ VL  +    + RI      G+ AFYG
Sbjct: 413 QIDYLSLSLRDPNDKVKFYKDDLMWDKAESSLEKVLIDLGLKYEKRI------GDAAFYG 466

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK +  +K A   +    TIQ+DF +P++F+  Y++   +   P+MIHR + G+ ERFI 
Sbjct: 467 PKLDIQIKTAQNHEITVSTIQLDFLMPNKFDLIYIDKDQKLVRPIMIHRGLIGTYERFIA 526

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
            ++E  KG LPLWL+P Q  +  I+ S +EYA  I   LK   +    D R+E ++YKIR
Sbjct: 527 TLLEQTKGVLPLWLAPKQVEIIPISESNLEYANLIHQKLKKEFIRSHIDLRDERLSYKIR 586

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +   KK+P  ++ G+KE    +I  R++GS     +S+ + + +L ++
Sbjct: 587 DAQTKKVPYQLVLGNKEVENNTITYRQYGSEKQITISIQEFVDMLKQQ 634


>gi|42560810|ref|NP_975261.1| threonine-tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str.
           PG1]
 gi|42492306|emb|CAE76903.1| threonine-tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str.
           PG1]
 gi|301321098|gb|ADK69741.1| threonine--tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str.
           Gladysdale]
          Length = 639

 Score =  475 bits (1222), Expect = e-131,   Method: Composition-based stats.
 Identities = 187/648 (28%), Positives = 317/648 (48%), Gaps = 22/648 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           +K+   DGSIK +    +  D++  I     K  +   IN ++ D++  ++ + S+E+IT
Sbjct: 1   MKIKLLDGSIKEYNQEISVKDISLEIGL---KNVIGAKINDQLFDINYLIKNDCSLELIT 57

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV-AIGPIIEDGFYYDFDKEQPFSSDELAQI 122
            +      ++  + A I + A+ ++ P  Q        E  F   FD       D+L  I
Sbjct: 58  NKSKEYDLMLNLTAAFITSYAINNLKPISQAENFYNADEMEFSTTFDTNPRLVLDDLKNI 117

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           +  + +++  +           KA E+  +  + Y  E +        V +Y   +++ +
Sbjct: 118 QTNINQLLTSNLEIKFHIYDLNKALEILNNDYQKYLAEQMYEK--YHYVKVYSINDFYMV 175

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
                + +   VK       + G+YW  D N  ML R++G    +  EL      LE+  
Sbjct: 176 INNALILNPNFVKVIDVEQ-LTGSYWLNDKNNIMLQRVHGLCATSNSELKNKKVILEDRR 234

Query: 243 KRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
            RDHR + + +++F      G+G+  W   G+ +   +  Y+R+K  + DY  + TP + 
Sbjct: 235 SRDHRLINKTLNIFGFDQLVGAGLPLWLPNGFIVKNEIEKYLRQKEWEYDYIPVETPPIG 294

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
              L++ SGHWD Y  +M   +  +        F L+PMNCP H+AV+    +SYR+LP+
Sbjct: 295 TVELYKTSGHWDHYGEDM--FQPFNGGKGSDEQFILRPMNCPHHIAVYKQEQRSYRDLPL 352

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+ E    +R E SGSL GL RVRG    D+H+F   +Q+ +E    + LI  +   F  
Sbjct: 353 RICEHAIQHRFESSGSLTGLERVRGMKLTDSHIFVRSDQIEDEFRSTYKLISEVLNTFNI 412

Query: 421 EKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           +   + LS R           D +WD AE+ ++ VL  +    + RI      G+ AFYG
Sbjct: 413 QIDYLSLSLRDPNDKVKFYKDDLMWDKAESSLEKVLIDLGLKYEKRI------GDAAFYG 466

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK +  +K A   +    TIQ+DF +P++F+  Y++   +   P+MIHR + G+ ERFI 
Sbjct: 467 PKLDIQIKTAQNHEITVSTIQLDFLMPNKFDLTYIDKDQKLVRPIMIHRGLIGTYERFIA 526

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
            ++E  KG LPLWL P Q  +  I+ S +EYA  I   LK   +    D R+E ++YKIR
Sbjct: 527 TLLEQTKGVLPLWLVPKQVEIIPISESNLEYANLIHQKLKKEFIRSHIDLRDERLSYKIR 586

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +   KK+P  ++ G+KE    +I  R++GS     +S+ + + +L ++
Sbjct: 587 DAQTKKVPYQLVLGNKEVENNTITYRQYGSEKQITISIQEFVDMLKQQ 634


>gi|13542113|ref|NP_111801.1| threonyl-tRNA synthetase [Thermoplasma volcanium GSS1]
 gi|22654129|sp|Q978W0|SYT_THEVO RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|14325544|dbj|BAB60447.1| tRNA synthetase Thr [Thermoplasma volcanium GSS1]
          Length = 660

 Score =  475 bits (1221), Expect = e-131,   Method: Composition-based stats.
 Identities = 215/648 (33%), Positives = 345/648 (53%), Gaps = 57/648 (8%)

Query: 36  KKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           KK +AV    K  DL +    + +++ +  +    L ++RHS AH++A AV +++PE   
Sbjct: 21  KKVIAVKKGDKFLDLDEIAGEDEAVQPVYLDSEDGLYILRHSAAHLLANAVTNLFPEALP 80

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
             GP++E+GFYYDFD  +P + ++L++IE++M+ I+  + P  +   S ++  ++    K
Sbjct: 81  NTGPVVENGFYYDFDM-KPITEEDLSKIEEEMKRIVKENVPIRRMIYSKDELLKI--FSK 137

Query: 155 EAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNR 214
             YK+ I+      ++ ++Y+QG + DLC GPHV STG +K F  L   +  Y   +S  
Sbjct: 138 NPYKIRIINENVEGKS-SVYQQGNFVDLCLGPHVPSTGYIKAFKLLSIASAVYKYDESKN 196

Query: 215 PMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGW 273
             L RIYGTA+  ++ L +YL  LEE++KRDHRK+  EMDL    +E   G   +   G 
Sbjct: 197 --LVRIYGTAFPDEKSLRRYLENLEEAKKRDHRKIIAEMDLAVFNSEWAPGFPMYTPNGQ 254

Query: 274 KIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
            I + LI YM     K+ + ++ TP V    +W+QSGH+  Y+ NM+        + D  
Sbjct: 255 IIRKELIKYMDYVNGKNGWTDVWTPHVFKDTIWKQSGHYAKYKPNMYLF-----VLPDGD 309

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
           ++ +KPMNCPGH+A+F     SYR+LPV+ +E G+VYR E SG + GL R R FTQDD H
Sbjct: 310 SYGIKPMNCPGHIAIFARRKYSYRDLPVKYSEPGTVYRYEKSGEVGGLTRPRAFTQDDGH 369

Query: 393 VFCTKEQMFNECLKIHNLIISIYKD-FGFEKIMVKLS--------------------TRP 431
            F   +Q+  E   +  ++   +   FG  ++   LS                     R 
Sbjct: 370 EFIRMDQIVGEIKTLLGMVRETFTTVFGNIEMAFDLSVIDKEHPENYLLSYVCKDCGNRV 429

Query: 432 EKRVGSD---------------ALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           E   G+D               + WD+A   ++  +D++       I      GE AFYG
Sbjct: 430 EGLRGTDIECPVCHSHNMDPDFSTWDNATEQLRQAMDSMG------ITYKEYPGEAAFYG 483

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK +  +KDA+GR WQ  TIQVDF +P  F   Y NS  ++   V+IHRA++GS ERF+ 
Sbjct: 484 PKIDVHVKDALGRMWQLSTIQVDFFMPINFGLTYTNSEGKEERVVIIHRAIYGSYERFMA 543

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           I++E+F G LP WL+PIQ  V  + ++  EYA+++   L    +    D   +T++ KI+
Sbjct: 544 ILLEHFAGKLPTWLTPIQTYVIPVGTANAEYARKVNKSLLDAGIRSVVDDGPDTVSKKIK 603

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
               ++   I++ G KE  + ++ +R     + +   + + + I+  E
Sbjct: 604 MIHDQRPSYIVVVGAKEEQDNTVTVRNRAGKS-KTYGMNEFLEIIKNE 650


>gi|48477666|ref|YP_023372.1| threonyl-tRNA synthetase [Picrophilus torridus DSM 9790]
 gi|48430314|gb|AAT43179.1| threonyl-tRNA synthetase [Picrophilus torridus DSM 9790]
          Length = 710

 Score =  475 bits (1221), Expect = e-131,   Method: Composition-based stats.
 Identities = 225/653 (34%), Positives = 357/653 (54%), Gaps = 58/653 (8%)

Query: 32  RSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWP 90
             L ++ VA  +N ++ DLSD V  +G  E+I       L ++RHS AH++A AV  ++ 
Sbjct: 66  EKLNQRIVAARMNKRLFDLSDSVPEDGDAELIDVYSDDGLIILRHSAAHVLANAVVELYN 125

Query: 91  EVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELF 150
            +        E GFYYDFD  QP S+D+  +IE KM++II ++    K  +  +    LF
Sbjct: 126 ALPNTSNENQE-GFYYDFDM-QPISTDDFPKIEDKMKDIIDKNIKIEKYTMKKDDILNLF 183

Query: 151 ESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRG 210
           +     YK++ +    A ++ T+YR+G++++ CRGPHV STG +K F KL+ +A   + G
Sbjct: 184 K--NNPYKIDKINK-NADDDATVYREGDYYEFCRGPHVPSTGFIKAF-KLLSIASTTYNG 239

Query: 211 DSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDG-SGVIFWH 269
           + N   + RIYGTA+  ++ L ++L   EE+ KRDHR++ +EMDLF    +   G+ F+ 
Sbjct: 240 EINGKRMIRIYGTAFPDKKMLNEFLKNREEAMKRDHRRIGQEMDLFIFDTERAPGMPFYT 299

Query: 270 RKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTI 328
             G  I   LI YM     +++++E+ T  V    +W+QSGH+D Y+ +MF  +     +
Sbjct: 300 PNGAVIRNELIKYMGEINARNNWQEVWTAHVFRDLIWKQSGHYDKYKNDMFLFQ-----L 354

Query: 329 KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQ 388
           ++   + LKPMNCPGH+ +F  G+ SYR++PV+  E G+VYR E SG + GL R RGFT 
Sbjct: 355 ENGEHYGLKPMNCPGHITIFQRGIYSYRDMPVKYCEPGTVYRYEKSGEMGGLTRPRGFTI 414

Query: 389 DDAHVFCTKEQMFNECLKIHNLIISIYKD-FGFEKIMVKLSTRPEK-------------- 433
           DD H F  ++Q+  E   +  +I  ++    G  +    LS   +               
Sbjct: 415 DDGHGFLRQDQILEEVSSLLGMIHEVFNTILGNVEFSFDLSVMDKNSPENYLIEYKCRNC 474

Query: 434 ------RVGSD----------------ALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
                 R GS                 ++WD A   ++  L++        +N     GE
Sbjct: 475 GNVFMLRAGSSKIECPKCSSKDLEMDFSMWDAATENLRKALES------RNLNYKEYPGE 528

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
            AFYGPK +  +KDA+ R WQ  TIQ+DF +P  F+ +Y+NS  +K  PV+IHRA++GS 
Sbjct: 529 AAFYGPKIDVHVKDALNRFWQLSTIQLDFFMPINFDLYYINSDGKKERPVIIHRAIYGSY 588

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           ERFI I++E++ G LP WLSPIQ+ V  ++ +  EYA+ I +L   +++  + D  +ETI
Sbjct: 589 ERFIAILLEHYNGKLPTWLSPIQSYVIPVSENYNEYAESINSLFVKNNIRSKIDLSSETI 648

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           + KI+     +   II+ G+KE   +S+ IR     T + + + + I  +  E
Sbjct: 649 SKKIKMIRKMRPSYIIVVGEKEEHNKSVSIRNRKDKTIE-MPVNEFIEKIKDE 700


>gi|299783724|gb|ADJ41722.1| Threonyl-tRNA synthase [Lactobacillus fermentum CECT 5716]
          Length = 601

 Score =  474 bits (1220), Expect = e-131,   Method: Composition-based stats.
 Identities = 193/596 (32%), Positives = 328/596 (55%), Gaps = 21/596 (3%)

Query: 54  VREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-Q 112
           +  G++E +  E   SL  +R   A ++  A+Q  +  +++      ED F+ D DK+ Q
Sbjct: 8   LPNGTVEKVDRESKESLDALRQVAALLLKAALQDQFKGIRLGEAVAEEDQFFVDSDKDNQ 67

Query: 113 PFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVT 172
             S+DEL  +E+ ++++   +       +S + A +  E   + +  E+L+       V+
Sbjct: 68  QVSADELEGLERAVKKLAKENLKIELVKVSVDDAVKAVE--GDQFSSELLKENAEDGQVS 125

Query: 173 LYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELT 232
           LY+ G+   L + P +     + K  KL+ VAGAYW+G S+ PML RIYGT +  +++L 
Sbjct: 126 LYKMGDATILAQAP-IMLYANLVKNVKLLSVAGAYWKGMSSNPMLQRIYGTVFFKKEDLE 184

Query: 233 QYLYFLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISY-MRRKIKDD 290
             L   +E+ +RDHR +  ++DLF +      G+ +W  KG  I +T+  Y + +++ D 
Sbjct: 185 ADLKARQEARERDHRVIGNQLDLFFVDPKVGAGLPYWMPKGSTIRRTIERYVIDKEVGDG 244

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH 350
           YE + TP +++ + ++ SGHWD YR +MF          D     L+PMNCP H+ ++ H
Sbjct: 245 YEHVYTPVLMNLNAYKTSGHWDHYREDMFPPMDMG----DGELLELRPMNCPSHIQIYKH 300

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
            ++SYRELP+R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  KI  L
Sbjct: 301 HIRSYRELPLRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQIQDEFAKILKL 360

Query: 411 IISIYKDFGFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           I+ +YKDF       +LS R  K       +D +W+ +++++K  +D++       ++  
Sbjct: 361 IMDVYKDFNINDYTFRLSYRDPKNTEKYFANDEMWERSQSMLKAAMDSMG------LDYY 414

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
              GE AFYGPK +   K A+G D    TIQ+DF LP +F+  YV    ++  P+MIHR 
Sbjct: 415 EAEGEAAFYGPKLDIQTKTALGNDETMSTIQLDFMLPEKFDLHYVGEDGKQHRPIMIHRG 474

Query: 527 VFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETD 585
           V G++ERF+  + E +KG  P WL+P Q  +  ++     +YA ++A   ++  L    D
Sbjct: 475 VVGTMERFVAYLTEIYKGAFPTWLAPNQVNIIPVSDEKHGDYADDLAREFRAAQLRTVVD 534

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            R+E + YKIRE   +K+P  ++ G+ E +  ++ +R++G      +S  D + ++
Sbjct: 535 HRSEKMGYKIRESQTQKVPYTLVVGEDEVANGTVSVRKYGEKDQVSMSKQDFLDLI 590


>gi|868027|gb|AAC43605.1| threonyl-tRNA synthetase [Buchnera aphidicola]
 gi|1098080|prf||2115235B Thr-tRNA synthetase
          Length = 642

 Score =  473 bits (1217), Expect = e-131,   Method: Composition-based stats.
 Identities = 251/649 (38%), Positives = 386/649 (59%), Gaps = 23/649 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           MP    + F DGS + +        + E    ++ +  +A+++N    + +  +  + SI
Sbjct: 1   MPV---IRFCDGSQQVYKHSVLIERIIEIKKPNIIRSLIAISVNNSFSNFNSLITEDSSI 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
             I+ +D  +L +IR+SC  ++  A +  WP  ++    I +  F      +        
Sbjct: 58  SFISKKDCEALNIIRYSCIQLLNYAAKKRWPSSKIGESEITKVVFIVILILKIVLQKKIF 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENV-TLYRQGE 178
             +E  M+ +I R+     Q +S + A E+F+ K E YK+ +++    K+N  +LY    
Sbjct: 118 FILENNMKTLIKREYFISHQNISFDHAYEMFKKKSEIYKIHLIKKYINKKNKISLYYHEN 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           +FD+  G  V +    K F    K+ G YW+GD    ML RIYGTAW+T++EL ++L ++
Sbjct: 178 YFDIDMGMQVFNIRFCKYF--NYKIGGIYWKGDHKNKMLQRIYGTAWSTKKELDKHLSYI 235

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEINT 296
            E +KRDHRK+ + ++L+H+ ++  G+IFWH  GW IF  L  ++R K+K   +Y+E+ T
Sbjct: 236 NELKKRDHRKIGKLLNLYHMQKESPGMIFWHNNGWIIFNELEIFVREKLKGIINYKEVKT 295

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P ++ + +WQ+SGHWD+Y+  +F       T  + R + +KPMNCPGHV +FN GLKSYR
Sbjct: 296 PLLIHKSIWQKSGHWDNYQDRIFT------TSSENREYCIKPMNCPGHVQIFNCGLKSYR 349

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +LP+R+AEFGS +RNE SGSLHGLMR+R FTQDDAH+FCT+EQ+  E      +I  +Y 
Sbjct: 350 DLPIRMAEFGSCHRNESSGSLHGLMRIRNFTQDDAHIFCTQEQLRYEINNCIKMIYDLYS 409

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
            F F+KI+VK STRP+KR+G +++WD AE  +  VL       ++ +      GEGAFYG
Sbjct: 410 TFNFKKILVKFSTRPKKRIGDESVWDQAEKDLSDVLI------ENNLKFEHQEGEGAFYG 463

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK E++L+D++ R+WQCGTIQ+DF LP R  +FY++ H+ +  P++IHRA+ GSIERFIG
Sbjct: 464 PKIEFVLQDSLDRNWQCGTIQLDFYLPIRLRSFYIDEHNHQKIPIIIHRAILGSIERFIG 523

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           I+IE F+  +P WLSPIQ ++ +IT S + Y ++I       ++ +E+D RNE I +KIR
Sbjct: 524 ILIEEFQ-EIPTWLSPIQVVILSITDSHINYVKKIVQHFSDINIRVESDLRNEKIGFKIR 582

Query: 597 EHSIKKIPIIIICGDKEASE-RSIGIRRFGSTTTQKVSLLDAIPILTKE 644
              I    I I    KE    + I +R         + +   I  L KE
Sbjct: 583 ATYIASNSIYINLWRKEKLNLKKISVRTRNGYNLGIIDIDCFIKKLQKE 631


>gi|62422036|gb|AAX82600.1| putative threonyl-tRNA synthetase [Lactobacillus reuteri]
          Length = 601

 Score =  473 bits (1217), Expect = e-131,   Method: Composition-based stats.
 Identities = 192/597 (32%), Positives = 319/597 (53%), Gaps = 21/597 (3%)

Query: 56  EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPF 114
           +GS++ I  +   SL  +R   A ++  A++  +  +++      EDGF+ D DK+ Q  
Sbjct: 10  DGSVKKIDRDSQESLEALRKLSALMLKAALKQEFKGIRLGEAVADEDGFHVDSDKDNQQV 69

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
           S+DEL  +E  ++ +   D       +  E+A    E K + +  E++        V +Y
Sbjct: 70  SADELPALEDVIKGMAKNDVKVEFVEVPVEEALA--EVKDDRFSTELINENAKDGKVAMY 127

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
           + G+         +   G V K  +L+ VAGAYW+G S+ PML RIYGT +  +  L + 
Sbjct: 128 QLGD-VKAVADDDILLYGNVVKNLRLLSVAGAYWKGMSSNPMLQRIYGTVFYKKDALEED 186

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYE 292
           L   +E+++RDHR +  ++DLF +      G+ +W  KG  I +T+  Y+  R++ D ++
Sbjct: 187 LKKRQEAKERDHRVIGNQLDLFFVDPKVGAGLPYWLPKGATIRRTIERYIIDREVADGHQ 246

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
            + TP +++   ++ SGHW  YR +MF          D      +PMNCP H+ V+ H +
Sbjct: 247 HVYTPVLMNLDAYKTSGHWAHYRDDMFPPMDMG----DGEMLESRPMNCPSHIQVYKHHI 302

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
           +SYR+LP+R+AE G ++R E SG+L GL RVR  T +D H F T +Q+ +E  KI  LI+
Sbjct: 303 RSYRDLPLRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVTLDQIRSEFAKILKLIM 362

Query: 413 SIYKDFGFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
           S+Y+DF       +LS R  K       +D +W+ +++++K  +D +       ++    
Sbjct: 363 SVYEDFDITDYSFRLSLRDPKNVKKYYANDEMWEKSQSMLKSAMDDLN------LDYYEA 416

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
            GE AFYGPK +   K A+G D    TIQ+DF LP RF   YV    ++  PVMIHR V 
Sbjct: 417 EGEAAFYGPKLDIQTKTALGNDETMSTIQLDFMLPERFGLSYVGQDGKEHQPVMIHRGVV 476

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFR 587
           G++ERF+  + E +KG  P WL+P Q  +  +      EYA  +A  +K+ ++ +    R
Sbjct: 477 GTMERFMAYLTEIYKGAFPTWLAPEQVHIIPVNEEAHGEYADNLAKKMKAANIRVNVAHR 536

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           NE + YKIRE   +K+P  ++ GD E +   + + ++G     ++S    +  + ++
Sbjct: 537 NEKMGYKIREAQTQKVPYTLVVGDDEKNSNGVSVSKYGEKEQNEMSQEAFMNEILED 593


>gi|257076511|ref|ZP_05570872.1| threonyl-tRNA synthetase [Ferroplasma acidarmanus fer1]
          Length = 668

 Score =  473 bits (1216), Expect = e-131,   Method: Composition-based stats.
 Identities = 225/663 (33%), Positives = 358/663 (53%), Gaps = 57/663 (8%)

Query: 23  GSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPEDPRSLAVIRHSCAHIM 81
           G    E +        VA     K+ DLSD   + G +E I    P    ++ HS AH++
Sbjct: 12  GEQFQEIVPEKSGHSIVAARFLNKLYDLSDVAPDNGEVEFIQINSPEGEKILLHSTAHLL 71

Query: 82  AEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYL 141
           A A+  ++P+         ED FYYDF+  +P S ++   IE+KMQE++  + P +++ L
Sbjct: 72  ANAIVDLYPDALPNTSNESEDTFYYDFNM-KPVSIEDFPLIEEKMQELVQANIPIMRKIL 130

Query: 142 SHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKL 200
              +  +  E     YK++ + E++P  EN ++Y QG + + CRGPHV STG +  F KL
Sbjct: 131 PKNEILK--EFSYNKYKLDKINENVPDGENSSIYIQGNYKEFCRGPHVPSTGYIGAF-KL 187

Query: 201 MKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAE 260
           + ++   + GD N+  + RIYGTA+  +++L  +L   EE+ KRDHRK+ +EMDLF    
Sbjct: 188 LSISSTNYEGDVNKDKMIRIYGTAFPDKKQLKAFLLRREEAIKRDHRKIGQEMDLFTFDN 247

Query: 261 DG-SGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANM 318
           +   G+ F+   G  I   LI+YM+    K  +EE+ T       +W+QSGH+  Y+ +M
Sbjct: 248 ERAPGMPFYAPNGAIIRNELINYMKELNEKSGWEEVWTAHAFKDIIWKQSGHYYKYKDDM 307

Query: 319 FAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLH 378
           F       T+ +   + LKPMNCPGH+A+F   + SYR++PV+ +E G+VYR E SG + 
Sbjct: 308 FLF-----TLPNGDNYGLKPMNCPGHIAIFQRSVYSYRDMPVKYSEAGTVYRYEKSGEMG 362

Query: 379 GLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD-FGFEKIMV----KLSTRPEK 433
           GL R RGFT DD H F  ++Q+F+E + +  +I SI+K   G E+I           PE 
Sbjct: 363 GLTRPRGFTIDDGHGFVREDQIFDETISLLKIIPSIFKTILGTEEITYDLSVMDKQHPEN 422

Query: 434 RVGSDA--------------------------------LWDDAENIMKGVLDTIKNSSQD 461
            + S                                  +WD+A   ++  L+ +K     
Sbjct: 423 YLMSYECSSCGEKFMLRAASQEYKCPACGSENLNSDFSMWDNATENLRRALEELK----- 477

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
            +      GE AFYGPK +  +KDA+GR WQ  TIQ+DF +P+ F+ +Y++ +  K  PV
Sbjct: 478 -LKYTEYPGEAAFYGPKIDVHIKDALGRLWQLSTIQIDFFMPANFDLYYIDKNDTKVRPV 536

Query: 522 MIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLS 581
           +IHRA++GS ERFI I++E+F G LPLWL+P+QA +  ++ +  EYA EI   L+   + 
Sbjct: 537 IIHRAIYGSYERFIAILLEHFNGKLPLWLTPLQAYIIPVSEAYNEYATEINKKLREKGIR 596

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            + D  + TI+ KI+     +   I++ G+KE +  S+ +R      T++  + + + I+
Sbjct: 597 SKVDISDGTISKKIKLIRTMRPSYILVVGEKELANNSVSVRNRKDK-TREYGMDEFMGIM 655

Query: 642 TKE 644
            +E
Sbjct: 656 AEE 658


>gi|145511956|ref|XP_001441900.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124409161|emb|CAK74503.1| unnamed protein product [Paramecium tetraurelia]
          Length = 609

 Score =  473 bits (1216), Expect = e-131,   Method: Composition-based stats.
 Identities = 192/620 (30%), Positives = 314/620 (50%), Gaps = 47/620 (7%)

Query: 33  SLAKKAVAVAINGK-----VCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQ 86
           S+ K A    +  K     + DL+  ++ + +IE +   +  +  V  HS AH++   + 
Sbjct: 27  SVPKDAFIAKVTNKDGSTSLHDLNREIKQDCTIEFLDFSNQDARRVFWHSSAHVLGAILS 86

Query: 87  SIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD-SPFLKQYLSHEK 145
                 ++  GP  E+GFYY    ++     EL Q+ +++++ + +    F  Q +S  +
Sbjct: 87  KF--GAELEFGPSTENGFYYQCKMDK---EIELDQLNQEIEQYLKQKKHLFEIQSISQNE 141

Query: 146 ARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAG 205
           A +L    K +YK+  ++   A +   +Y+  ++ DLC+GPH+  T          ++  
Sbjct: 142 ALQL--FSKNSYKLSKIKQ-TAFQQYQIYKLDDFIDLCKGPHIDHT---------NRIYK 189

Query: 206 AYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGV 265
                        R  G A+   +   +Y    E     DHR + +   LF   +   G 
Sbjct: 190 LIINHSQPYQNSYRYQGIAFPNSKLFQEYQKQQE----CDHRHIGKHQHLFVFNKLAPGS 245

Query: 266 IFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCA 324
            F+   G KI+  LI  +R++ ++  Y+E+ TPQ+ ++ LW+QSGH D Y  N++     
Sbjct: 246 AFFLPHGTKIYNKLIEMIRKEYRERGYQEVITPQLFNKELWKQSGHLDKYAENIYMT--- 302

Query: 325 DDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVR 384
                      LKPMNCPGH  ++     SY+ELP+R A+FG ++RNE  G+L GL RVR
Sbjct: 303 -----HDHQMGLKPMNCPGHCLLYKTLQHSYKELPIRFADFGVLHRNEVHGTLTGLTRVR 357

Query: 385 GFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
            FTQDDAH+FCT EQ+  E     + +  +Y  FGF    + LSTRP+K +G   +WD+A
Sbjct: 358 KFTQDDAHIFCTIEQIQQEIKNTLDFLSRVYGRFGFT-WELTLSTRPDKYIGDLQIWDEA 416

Query: 445 ENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPS 504
           E  ++  L   +             G+GAFYGPK + +++D   +  QCGTIQ+DFNLP 
Sbjct: 417 ERQLRIALSDTQ--------YTENPGDGAFYGPKIDVLIRDHNQKQHQCGTIQLDFNLPE 468

Query: 505 RFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA 564
           RF+  Y + + +   PVMIHRA+ GSIER + I+ E + G  P WLSP Q ++  ++  +
Sbjct: 469 RFDLTYHHENDKFSRPVMIHRAILGSIERMMAILTEQYNGKWPFWLSPRQVMIIPVSEIS 528

Query: 565 VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRF 624
            +YA+EI + L      +E +   +T+  +IR+  +     II  G KE    ++ +R  
Sbjct: 529 KQYAKEIYDQLYKLGFEVELEDTEQTLGKRIRKGEMLHFNYIITVGAKEQESNTVDVRER 588

Query: 625 GST-TTQKVSLLDAIPILTK 643
           G     Q + L + I  + +
Sbjct: 589 GDNHKHQSMKLDEFITKINQ 608


>gi|145534943|ref|XP_001453210.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124420921|emb|CAK85813.1| unnamed protein product [Paramecium tetraurelia]
          Length = 609

 Score =  472 bits (1215), Expect = e-131,   Method: Composition-based stats.
 Identities = 193/620 (31%), Positives = 316/620 (50%), Gaps = 47/620 (7%)

Query: 33  SLAKKAVAVAINGK-----VCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQ 86
           S+ K A    +  K     + DL+  ++ + +IE +   +  +  V  HS AH++   + 
Sbjct: 27  SVPKDAFIAKVTNKDGSTSLHDLNRELKQDCTIEFLDFSNQDARRVFWHSSAHVLGAILS 86

Query: 87  SIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD-SPFLKQYLSHEK 145
                 ++  GP  E+GFYY    ++     EL Q+ +++++ + +    F  Q +S ++
Sbjct: 87  KF--GAELEFGPSTENGFYYQCKLDK---EIELDQLNQEIEQYLKQKKHLFEIQSISQDE 141

Query: 146 ARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAG 205
           A +L    K AYK+  ++   A +N  +Y+  ++ DLC+GPH+  T ++ K         
Sbjct: 142 ALQL--FNKNAYKLSKIKQ-TAFQNYQIYKLDDFVDLCKGPHIDHTNRIYKLIINHSQPF 198

Query: 206 AYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGV 265
                        R  G A+   +    Y   +E     DHR + ++  LF   +   G 
Sbjct: 199 QNSY---------RYQGIAFPNSKLYQDYQKQME----CDHRHIGKQNHLFVFNKLAPGS 245

Query: 266 IFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCA 324
            F+   G KI+  L+  +R++ ++  Y+E+ TPQ+  + LW+QSGH D Y  N++     
Sbjct: 246 AFFLPHGTKIYNKLVEMIRKEYRERGYQEVITPQLFHKDLWKQSGHLDKYAENIYMT--- 302

Query: 325 DDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVR 384
                      LKPMNCPGH  ++     SY+ELP+R A+FG ++RNE  G+L GL RVR
Sbjct: 303 -----HDHQMGLKPMNCPGHCLLYKTLQHSYKELPIRFADFGVLHRNEVHGTLTGLTRVR 357

Query: 385 GFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
            FTQDDAH+FCT EQ+  E     + +  +Y  FGF    + LSTRP+K +G   +WD+A
Sbjct: 358 KFTQDDAHIFCTIEQIQQEIKNTLDFLSKVYGRFGFT-WELTLSTRPDKYIGDLQIWDEA 416

Query: 445 ENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPS 504
           E  ++  L                 G+GAFYGPK + +++D   +  QCGTIQ+DFNLP 
Sbjct: 417 ERQLRIALSDT--------PYTENPGDGAFYGPKIDVLIRDHNQKQHQCGTIQLDFNLPE 468

Query: 505 RFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA 564
           RF+  Y + + +   PVMIHRA+ GSIER + I+ E + G  P WLSP Q ++  ++  +
Sbjct: 469 RFDLTYHHENDKFSRPVMIHRAILGSIERMMAILTEQYNGRWPFWLSPRQVLIIPVSEVS 528

Query: 565 VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRF 624
            +YA+EI + L      +E +   +T+  +IR+  +     I+  G KE    ++ +R  
Sbjct: 529 KQYAKEIYDQLYKLGFEVELEDSEQTLGKRIRKGEMLHFNYILTLGAKEQESNTVDVRER 588

Query: 625 GST-TTQKVSLLDAIPILTK 643
           G     Q + L + I  + +
Sbjct: 589 GDNHKHQSMKLDEFITKIIQ 608


>gi|83319726|ref|YP_424209.1| threonyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum
           ATCC 27343]
 gi|83283612|gb|ABC01544.1| threonyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum
           ATCC 27343]
          Length = 639

 Score =  472 bits (1214), Expect = e-131,   Method: Composition-based stats.
 Identities = 187/648 (28%), Positives = 319/648 (49%), Gaps = 22/648 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           +K+   DGSIK +    +  D++  I     K  +   IN ++ D++  ++ +  +E+IT
Sbjct: 1   MKIKLLDGSIKEYNQEISVKDISLEIGL---KNVIGAKINDQLFDINYLIKNDCDLELIT 57

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIG-PIIEDGFYYDFDKEQPFSSDELAQI 122
            +      ++  + A I + A+ ++    Q  I     E  F   F+ E     D+L  I
Sbjct: 58  NKSKEYDLMLNLTAAFITSYAINNLKSISQAEIFYNADEMEFSTTFNTEPRLVLDDLKNI 117

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           +  +  ++  +           KA E+     +  K    +       V +Y   +++ +
Sbjct: 118 QTNINNLLTSNLEIKSNIYDLNKALEI--LNNDYQKYLAKQMYEKYHYVKVYSINDFYMV 175

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
                + ++  +K    + ++ G+YW  D N  ML R++G    +  EL      LE+  
Sbjct: 176 VNKALILNSNFIKIID-IEQLTGSYWLNDKNNIMLQRVHGLCATSSSELKNKKVILEDRR 234

Query: 243 KRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
            RDHR + + +++F      G+G+  W   G+ +   +  Y+R+K  + DY  + TP + 
Sbjct: 235 SRDHRLINKRLNIFGFDQLVGAGLPLWLPNGFIVKNEIEKYLRQKEWEYDYIPVETPPIG 294

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
              L++ SGHWD Y  +M   +  +        F L+PMNCP H+AV+    +SYR+LP+
Sbjct: 295 TVELYKTSGHWDHYGEDM--FQPFNGGKGSDEQFILRPMNCPHHIAVYKQEQRSYRDLPL 352

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+ E    +R E SGSL GL RVRG    D+H+F   +Q+ +E    + LI  + K F  
Sbjct: 353 RICEHAIQHRFESSGSLTGLERVRGMKLTDSHIFVRSDQIEDEFRSTYKLISEVLKTFNI 412

Query: 421 EKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           +   + LS R           D +WD AE+ ++ VL  +    + RI      G+ AFYG
Sbjct: 413 QIDYLSLSLRDPNDKVKFYKDDLMWDKAESSLEKVLIDLGLKYEKRI------GDAAFYG 466

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK +  +K A   +    TIQ+DF +P++F+  Y++   +   P+MIHR + G+ ERFI 
Sbjct: 467 PKLDIQIKTAQNHEITVSTIQLDFLMPNKFDLTYIDKDQKLVRPIMIHRGLIGTYERFIA 526

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
            ++E  KG LPLWL+P Q  +  I+ S +EYA  I   LK   +    D R+E ++YKIR
Sbjct: 527 TLLEQTKGVLPLWLAPKQVEIIPISESNLEYANLIHQKLKKEFIRSHIDLRDERLSYKIR 586

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +   KK+P  ++ G+KE    +I  R++GS     VS+ + I +L ++
Sbjct: 587 DAQTKKVPYQLVLGNKEVENNTITYRQYGSDAQITVSIQEFIDMLKQQ 634


>gi|34482934|emb|CAE09933.1| THREONYL-TRNA SYNTHETASE [Wolinella succinogenes]
          Length = 536

 Score =  471 bits (1212), Expect = e-130,   Method: Composition-based stats.
 Identities = 220/548 (40%), Positives = 328/548 (59%), Gaps = 20/548 (3%)

Query: 101 EDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVE 160
           ++GFYYDF  E     ++LA IEKKM+EI    S   +  LS E+A    +  K+  K  
Sbjct: 2   QEGFYYDFRVESKIGEEDLAIIEKKMKEIAKNGSDIERYTLSREEAIA--KFAKDDLKQA 59

Query: 161 ILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRI 220
           ++  IP  + +++YRQGE+ DLCRGPH+ ST  +  F KL K+AGAY  GD    ML+RI
Sbjct: 60  VISRIPEGD-LSIYRQGEFEDLCRGPHLPSTKLLHAF-KLTKLAGAYLGGDEKSEMLTRI 117

Query: 221 YGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTL 279
           YG A+  ++ L  YL+ +EE++KRDHRK+  EM LF   ED   G+  W   G ++ + L
Sbjct: 118 YGIAFADKESLNAYLHQMEEAKKRDHRKVGTEMGLFIFDEDVGAGLPIWLPAGARLRRRL 177

Query: 280 ISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKP 338
            + +    I+ +YE +  P++L   LW+ SGH+ +Y+ NM+  K       D   + +KP
Sbjct: 178 EAMLTEAHIRRNYEPVRGPEILKSDLWKISGHYQNYKENMYFTKI------DEVEYGIKP 231

Query: 339 MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE 398
           MNC GH+ V+  G++SYRELP+R  E+G V+R+E SG LHGL+RVR FTQDDAH+FC  E
Sbjct: 232 MNCVGHIKVYGSGVRSYRELPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDAHIFCRPE 291

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNS 458
           Q+ +E + I + +  I   FGF   M ++STRPEK +G +A+W+     +K  L+     
Sbjct: 292 QIKDEVVDIVHFVDKIMSAFGFNYEM-EISTRPEKSIGDEAIWEKGTQALKEALEA---- 346

Query: 459 SQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC 518
               +  G+  G GAFYGPK +  + DAIGR WQCGT+Q+D NLP RF   Y + ++   
Sbjct: 347 --QGLQYGIDEGGGAFYGPKIDIKITDAIGRKWQCGTVQIDMNLPERFELAYTDENNTPQ 404

Query: 519 HPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSH 578
            PVMIHRA+ GS ERF+ I+ E+F G  P +++P    +  I    +EYA+ +   L+  
Sbjct: 405 RPVMIHRAILGSFERFVAILTEHFGGEFPFFIAPTPVAIVPIGEEQLEYAKHLRLELQKV 464

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
            +  E   +NET+N KIR    +++P+I++ G++E +E+ + IR        ++   + I
Sbjct: 465 GVYAEIHDKNETLNKKIRTVEKQRVPMIVVLGEREVNEKKVAIRDRREKRQYELGEAEFI 524

Query: 639 PILTKESL 646
             L KE +
Sbjct: 525 Q-LAKEKM 531


>gi|331703296|ref|YP_004399983.1| Threonine tRNA ligase [Mycoplasma mycoides subsp. capri LC str.
           95010]
 gi|328801851|emb|CBW54004.1| Threonine tRNA ligase [Mycoplasma mycoides subsp. capri LC str.
           95010]
          Length = 639

 Score =  471 bits (1211), Expect = e-130,   Method: Composition-based stats.
 Identities = 184/648 (28%), Positives = 316/648 (48%), Gaps = 22/648 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIIT 63
           +K+   DGSIK +    +  D++  I     K  +   IN ++ D++  +++   +E+IT
Sbjct: 1   MKIKLLDGSIKEYNQEISVKDISSEIGL---KNVIGAKINDQLFDINYLIKDDCDLELIT 57

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWP-EVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
            +      ++  + A I + A+ ++             E  F   F+ E     D+L  I
Sbjct: 58  NKSKEYDLMLNLTAAFITSYAINNLKSINQAENFYNADEMEFSTTFNTEPRLVLDDLKNI 117

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           +  +  ++  +           KA E+     +  K    +       V +Y   +++ +
Sbjct: 118 QTNINNLLTSNLEIKSNIYDLNKALEI--LNNDYQKYLAKQMYEKYHYVKVYSINDFYMV 175

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
                + ++  +K    + ++ G+YW  D N  ML R++G    +  EL      LE+  
Sbjct: 176 VNKALILNSNFIKIID-IEQLTGSYWLNDKNNIMLQRVHGLCATSSSELKNKKVILEDRR 234

Query: 243 KRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
            RDHR + + +++F      G+G+  W   G+ +   +  Y+R+K  + DY  + TP + 
Sbjct: 235 SRDHRLINKTLNIFGFDQLVGAGLPLWLPNGFIVKNEIEKYLRQKEWEYDYIPVETPPIG 294

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
              L++ SGHWD Y  +M   +  +        F L+PMNCP H+AV+    +SYR+LP+
Sbjct: 295 TVELYKTSGHWDHYGEDM--FQPFNGGKGSDEQFILRPMNCPHHIAVYKQEQRSYRDLPL 352

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+ E    +R E SGSL GL RVRG    D+H+F   +Q+ +E    + LI  + K F  
Sbjct: 353 RICEHAIQHRFESSGSLTGLERVRGMKLTDSHIFVRSDQIEDEFRSTYKLISEVLKTFNI 412

Query: 421 EKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           +   + LS R           D +WD AE+ ++ VL  +    + RI      G+ AFYG
Sbjct: 413 QIDYLSLSLRDPNDKVKFYKDDLMWDKAESSLEKVLIDLGLKYEKRI------GDAAFYG 466

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK +  +K A   +    TIQ+DF +P++F+  Y++   +   P+MIHR + G+ ERFI 
Sbjct: 467 PKLDIQIKTAQNHEITVSTIQLDFLMPNKFDLTYIDKDQKLVRPIMIHRGLIGTYERFIA 526

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
            ++E  KG LPLWL+P Q  +  I+ S +EYA  I   LK   +    D R+E ++YKIR
Sbjct: 527 TLLEQTKGVLPLWLAPKQVEIIPISESNLEYANLIHQKLKKEFIRSHIDLRDERLSYKIR 586

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +   KK+P  ++ G+KE    +I  R++GS     V + + I +L ++
Sbjct: 587 DAQTKKVPYQLVLGNKEVENNTITYRQYGSDAQITVPIQEFIDMLKQQ 634


>gi|256372009|ref|YP_003109833.1| threonyl-tRNA synthetase [Acidimicrobium ferrooxidans DSM 10331]
 gi|256008593|gb|ACU54160.1| threonyl-tRNA synthetase [Acidimicrobium ferrooxidans DSM 10331]
          Length = 623

 Score =  470 bits (1208), Expect = e-130,   Method: Composition-based stats.
 Identities = 222/630 (35%), Positives = 345/630 (54%), Gaps = 31/630 (4%)

Query: 37  KAVAVA-INGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVA 95
           + VA    +G++ DL       ++  +    P    V+RHS AH++A+A+  +WP   +A
Sbjct: 9   RPVAARSDDGELVDLDRAGPGATL--VAASTPEGRQVLRHSGAHVVAKAISRLWPGTHLA 66

Query: 96  IGPIIEDGFYYDFD--KEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESK 153
           +GP  E+GF+YD +    +    D+LA I  +++ I+A D PF +  L  ++AR   +  
Sbjct: 67  VGPATEEGFFYDVELPGGRSLDDDDLAAIAAEVERIVAADEPFERIELELDEAR--RQLA 124

Query: 154 KEAYKVEILESIPAKEN---------VTLYRQG-EWFDLCRGPHVRSTGQVKKFFKLMKV 203
            + +K+EIL+ I A E          V++YR G ++ DLCRGPHV STG +     L +V
Sbjct: 125 DQPFKLEILDRIAAGEAETDAASGSAVSIYRTGADFIDLCRGPHVPSTGHLSALRLL-RV 183

Query: 204 AGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-G 262
           +GAYWRGD + P L R+ GTA+ + + L  +L  + E+E+RDHR+L +E  LF    + G
Sbjct: 184 SGAYWRGDEHGPRLQRVAGTAFESPEALEAWLTQIAEAERRDHRRLGQEQRLFFFPREIG 243

Query: 263 SGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
            G+  +   G  +   L  + RR      Y  + TP V    L++ SGH   YR +M+  
Sbjct: 244 GGLPVFEPDGAWVRYRLEEFSRRIHFAAGYVPVWTPHVTRGALFELSGHLGWYRESMYPA 303

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
              DD       + LKPM+CP H+  +    +SYRELP+RL E  +VYR E SG+LHGL 
Sbjct: 304 MELDD-----EEYFLKPMSCPMHILAYRQHPRSYRELPLRLFELATVYRYERSGTLHGLA 358

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALW 441
           RVR  TQDDAH+FC  +Q+ +E   + +L + +   FG      +LSTRP K VGSD  W
Sbjct: 359 RVRSLTQDDAHIFCRGDQLADELTGVLDLAMRLLGAFGLNDFEAELSTRPAKSVGSDEDW 418

Query: 442 DDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFN 501
           + A +  +  L+      +  +   V  GEGAFY PK +  L+DAIGR WQ  T+QVD  
Sbjct: 419 EFATSAARSALE------RSGLTYRVAEGEGAFYAPKIDIHLRDAIGRRWQLSTVQVDLQ 472

Query: 502 LPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT 561
           LP RF+  Y  + +    P MIHRA+FGS+ERF+ I+IE+F G LP WL      +  + 
Sbjct: 473 LPQRFDLGYQGADNRMERPFMIHRALFGSVERFLAILIEHFDGELPPWLVREPVRILPVA 532

Query: 562 SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
             A  +A+E+   L +  +  +    +E +  ++R    +++P I++ G+ + +  S+G+
Sbjct: 533 HEAAGWAEEVRAALVAAGVGAQVVAADEPLGARVRRARTERVPYIVVVGNDDVAAHSVGL 592

Query: 622 RRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
            R   +  + V+L  AI  + +     + +
Sbjct: 593 TRPDRSQARGVALETAIDEIARAVAMAEVR 622


>gi|16081463|ref|NP_393810.1| threonyl-tRNA synthetase [Thermoplasma acidophilum DSM 1728]
 gi|22654139|sp|Q9HL99|SYT_THEAC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|10639503|emb|CAC11475.1| threonine--tRNA ligase related protein [Thermoplasma acidophilum]
          Length = 660

 Score =  467 bits (1202), Expect = e-129,   Method: Composition-based stats.
 Identities = 236/675 (34%), Positives = 355/675 (52%), Gaps = 64/675 (9%)

Query: 9   FPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDP 67
            PD SI +        DV +       K  VAV I+  + DL D    +     ++    
Sbjct: 1   MPD-SIVHVKKGQRFLDVIKD------KNVVAVKIDSVLHDLRDVAERDVDAIPVSVYSD 53

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQ 127
             L ++RHS AH++A AV +++P+     GP++E+GFYYDFD  +P   ++LA+IE +M+
Sbjct: 54  DGLYILRHSAAHLLANAVTNLYPDALPNTGPVVENGFYYDFDM-KPIGEEDLAKIEDEMR 112

Query: 128 EIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPH 187
            I   + P  +    ++KA  L    K  YK+ I+E   +  + ++YRQG + DLC GPH
Sbjct: 113 RIQKENVPIERIV--YQKADLLRIFAKNPYKIRIIEDNVSDAS-SVYRQGNFVDLCLGPH 169

Query: 188 VRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHR 247
           V STG +K F  L   +  Y   +S    L RIYGTA+  ++ L QYL  LEE+++RDHR
Sbjct: 170 VPSTGYIKAFKLLNIASAVYKHDESKT--LVRIYGTAFPDEKLLKQYLNNLEEAKRRDHR 227

Query: 248 KLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLW 305
           ++  EMDL    +E   G   + + G  I + L+SYM    + + + ++ TP V    +W
Sbjct: 228 RIIAEMDLAVFNSEWAPGFPLYTQYGQTIRKELLSYMDSMNRKNGWFDVWTPHVFRDTIW 287

Query: 306 QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEF 365
           +QSGH+  YR NM+       T+ D  ++ +KPMNCPGH+A+F+    SYR+LPVR +E 
Sbjct: 288 KQSGHYAKYRPNMYLF-----TLPDGDSYGIKPMNCPGHIAIFSRRKYSYRDLPVRYSEP 342

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD-FGFEKIM 424
           G+VYR E SG + GL R R FTQDD H F   +Q+ +E   +  ++  ++   FG  ++ 
Sbjct: 343 GTVYRYEKSGEVGGLTRPRAFTQDDGHAFLRMDQIGDEIRTLLTMVKDVFTILFGNIELS 402

Query: 425 VKLS--------------------TRPEKRVGSD---------------ALWDDAENIMK 449
             LS                     R E   G+D               ++WD+A   ++
Sbjct: 403 FDLSVIDRDHPENYLVSYVCRNCGYRIEGARGTDIECPVCHSHDLEPDLSVWDNATEQLR 462

Query: 450 GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAF 509
             L ++       I      GE AFYGPK +  +KDAIGR WQ  TIQ+DF +P  F   
Sbjct: 463 DALKSMG------IEYKEYPGEAAFYGPKIDVHVKDAIGRMWQLSTIQLDFFMPVNFGLT 516

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQ 569
           Y NS  ++   VMIHRA++GS ER + I++E++ G LP WL+PIQ  V  I+S+  EYA+
Sbjct: 517 YTNSEGKEDRVVMIHRAIYGSYERVMAILLEHYAGKLPTWLTPIQTYVVPISSNFDEYAR 576

Query: 570 EIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
            +   L  H +  E D   ET++ KI+     +   II+ G KE    S+  R     + 
Sbjct: 577 HVHEELIRHGIRSEIDTSQETVSKKIKLIHPYRPAYIIVVGSKEMETNSVTARNREGKS- 635

Query: 630 QKVSLLDAIPILTKE 644
           +  SL + I ++ KE
Sbjct: 636 KTYSLSEFIDVVKKE 650


>gi|256384406|gb|ACU78976.1| threonine--tRNA ligase [Mycoplasma mycoides subsp. capri str. GM12]
 gi|256385238|gb|ACU79807.1| threonine--tRNA ligase [Mycoplasma mycoides subsp. capri str. GM12]
 gi|296455488|gb|ADH21723.1| threonine--tRNA ligase [synthetic Mycoplasma mycoides JCVI-syn1.0]
          Length = 639

 Score =  466 bits (1198), Expect = e-129,   Method: Composition-based stats.
 Identities = 186/648 (28%), Positives = 315/648 (48%), Gaps = 22/648 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           +K+   DGSIK +    +  D++  I     K  +   IN ++ D++  ++ +  +E+IT
Sbjct: 1   MKIKLLDGSIKEYNQEISIKDISSEIGL---KNVIGAKINDQLFDINYLIKNDCDLELIT 57

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV-AIGPIIEDGFYYDFDKEQPFSSDELAQI 122
            +      ++  + A I + A+ S     Q        E  F   FD E     D+L  I
Sbjct: 58  NKSKEYDLMLNLTAAFITSYAINSFKSISQAENFYNADEMEFSTTFDTEPRLVLDDLKNI 117

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           +  +  ++  +           KA E+     +  K    +       V +Y   +++ +
Sbjct: 118 QTNINNLLTSNLEIKSNIYDLNKALEI--LNNDYQKHLAKQMYEKYNYVKVYSINDFYMV 175

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
                + ++  +K    + ++ G+YW  D N  ML R++G    +  EL      LE+  
Sbjct: 176 IDKALILNSNFIKIID-IEQLTGSYWLNDKNNIMLQRVHGLCATSSSELKNKKVILEDRR 234

Query: 243 KRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
            RDHR + + +++F      G+G+  W   G+ +   +  Y+R+K  + DY  + TP + 
Sbjct: 235 SRDHRLINKTLNIFGFDQLVGAGLPLWLPNGFIVKNEIEKYLRQKEWEYDYIPVETPPIG 294

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
              L++ SGHWD Y  +M   +  +        F L+PMNCP H+AV+    +SYR+LP+
Sbjct: 295 TVELYKTSGHWDHYGEDM--FQPFNGGKGSDEQFILRPMNCPHHIAVYKQEQRSYRDLPL 352

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+ E    +R E SGSL GL RVRG    D+H+F   +Q+ +E    + LI  + K F  
Sbjct: 353 RICEHAIQHRFESSGSLTGLERVRGMKLTDSHIFVRSDQIEDEFRSTYKLISEVLKTFNI 412

Query: 421 EKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           +   + LS R           D +WD AE+ ++ VL  +    + RI      G+ AFYG
Sbjct: 413 QIDYLSLSLRDPNDKVKFYKDDLMWDKAESSLEKVLIDLGLKYEKRI------GDAAFYG 466

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK +  +K A   +    TIQ+DF +P++F+  Y++   +   P+MIHR + G+ ERFI 
Sbjct: 467 PKLDIQIKTAQNHEITVSTIQLDFLMPNKFDLTYIDKDQKLVRPIMIHRGLIGTYERFIA 526

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
            ++E  KG L LWL+P Q  +  I+ S +EYA  I   LK   +    D R+E ++YKIR
Sbjct: 527 TLLEQTKGVLSLWLAPKQVEIIPISESNLEYANLIHQKLKKEFIRSHIDLRDERLSYKIR 586

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +   KK+P  ++ G+KE    +I  R++GS     V + + I +L ++
Sbjct: 587 DAQTKKVPYQLVLGNKEVENNTITYRQYGSDAQITVPIQEFIDMLKQQ 634


>gi|73951031|ref|XP_857184.1| PREDICTED: similar to threonyl-tRNA synthetase-like 2 isoform 3
           [Canis familiaris]
          Length = 711

 Score =  465 bits (1197), Expect = e-129,   Method: Composition-based stats.
 Identities = 188/477 (39%), Positives = 274/477 (57%), Gaps = 17/477 (3%)

Query: 170 NVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQ 229
             T+YR G   DLC+GPHVR TG++K   K+ K +  YW G+     L RIYG ++   +
Sbjct: 236 TTTVYRCGPLIDLCKGPHVRHTGKIK-AIKIFKNSSTYWEGNPEMETLQRIYGISFPDNK 294

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
            +  +  F EE++ RDHRK+ +E +LF   +   G  F+  +G  I+ TL+ ++R +   
Sbjct: 295 MMKTWEKFQEEAKNRDHRKVGKEQELFFFHDLSPGSCFFLPRGAFIYNTLMDFIREEYHR 354

Query: 290 -DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
            ++ E+ +P + +  LW+ SGHW  Y  NMF      DT      FALKPMNCPGH  +F
Sbjct: 355 RNFTEVLSPNMFNSKLWETSGHWQHYSENMFTFDIEKDT------FALKPMNCPGHCLMF 408

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
            H  +S+RE+PVRLA+FG ++RNE SG+L GL RVR F QDDAH+FCT EQ+  E     
Sbjct: 409 AHRPRSWREMPVRLADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCTVEQIEEEIKGCL 468

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
             + S+Y  FGF   +  LSTRPE  +G   LWD+AE  ++  L       +      + 
Sbjct: 469 QFLQSVYSTFGFSFQLN-LSTRPENFLGEVELWDEAEKQLQNSLVEFGKPWK------MN 521

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH-PVMIHRAV 527
            G+GAFYGPK +  +KDAIGR  QC TIQ+DF LP RFN  YV+   +    PV+IHRA+
Sbjct: 522 PGDGAFYGPKIDIKIKDAIGRYHQCATIQLDFQLPIRFNLTYVSKDGDDKRNPVIIHRAI 581

Query: 528 FGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-F 586
            GS+ER I I+ EN+ G  P WLSP Q +V  +  +  +YA ++++         + D  
Sbjct: 582 LGSVERMIAILSENYGGKWPFWLSPRQVMVIPVGPTCEKYALQVSSAFFEEGFMADVDLD 641

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            + T+N KIR   + +   I++ G+KE +  ++ +R   +    ++S+  AI  L  
Sbjct: 642 HSCTLNKKIRNAQLAQYNFILVVGEKEKTNNAVNVRTRDNKIHGEISVTSAIHKLKN 698



 Score = 82.5 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 56/394 (14%), Positives = 121/394 (30%), Gaps = 52/394 (13%)

Query: 2   PSDIKLTFPDGSIKNFPVHAT-GSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
            + I +    G      V  T    VA  IS  LA+  V   +NG++ DL  P+  + ++
Sbjct: 159 SNVITVRMAGGKTVEGEVWTTTPYQVAAEISPELAESTVVAKVNGELWDLDRPLEGDSTL 218

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           E++T ++  + A +  S        V    P + +  GP +         K    SS   
Sbjct: 219 ELLTFDNEEAQAKVHTSTT-----TVYRCGPLIDLCKGPHVRHTGKIKAIKIFKNSSTYW 273

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ--- 176
                +    +              K  + +E  +E  K      +  ++ +  +     
Sbjct: 274 -----EGNPEMETLQRIYGISFPDNKMMKTWEKFQEEAKNRDHRKVGKEQELFFFHDLSP 328

Query: 177 --------GEWFDLCRGPHVRSTGQVKKFFKLMKVAGA---------YWRGDSNRPMLSR 219
                   G +        +R     + F +++              +W+  S       
Sbjct: 329 GSCFFLPRGAFIYNTLMDFIREEYHRRNFTEVLSPNMFNSKLWETSGHWQHYSENMFTFD 388

Query: 220 IYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTL 279
           I    +  +                 H    R      +    +     HR       + 
Sbjct: 389 IEKDTFALKPM-----NCPGHCLMFAH----RPRSWREMPVRLADFGVLHRNELSGTLSG 439

Query: 280 ISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPM 339
           ++ +RR  +DD     T +     + ++      +  ++++       +      + +P 
Sbjct: 440 LTRVRRFQQDDAHIFCTVE----QIEEEIKGCLQFLQSVYSTFGFSFQLN----LSTRPE 491

Query: 340 NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP 373
           N  G V +     ++ ++L   L EFG  ++  P
Sbjct: 492 NFLGEVEL---WDEAEKQLQNSLVEFGKPWKMNP 522


>gi|291460058|ref|ZP_06599448.1| threonine--tRNA ligase [Oribacterium sp. oral taxon 078 str. F0262]
 gi|291417399|gb|EFE91118.1| threonine--tRNA ligase [Oribacterium sp. oral taxon 078 str. F0262]
          Length = 626

 Score =  465 bits (1195), Expect = e-128,   Method: Composition-based stats.
 Identities = 226/616 (36%), Positives = 346/616 (56%), Gaps = 46/616 (7%)

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWP-EVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
            +  + L+V RHS AHI+A+AV  ++  +VQ AIGP +EDG YYDF   +P + +   +I
Sbjct: 1   MDKEQYLSVYRHSLAHILAKAVIELYGKDVQYAIGPEVEDGCYYDFVFPRPVTEENFKEI 60

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE-WFD 181
           E KM+EII R  P+ ++ LS ++A ELF+   + +K EI+E +P    ++ Y  G+ + D
Sbjct: 61  EDKMREIIRRKEPWTRRELSRKEALELFK--DQRFKKEIIEDLPEDAVISAYYTGDDFVD 118

Query: 182 LCRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           LCRGPHV ++ ++    F++   +GAYWRGD +R  L RIY  A+  ++ L  +L F++E
Sbjct: 119 LCRGPHVENSKELLNAAFQIKSTSGAYWRGDEHRDQLQRIYLYAFPDKEALKAHLKFVKE 178

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           +++RDH+KL  +++LF   E   G+ +W  +GWK++Q L+ Y R  + +  Y EI  P +
Sbjct: 179 AQERDHKKLGAQLELFLFDETAPGMPYWLPRGWKMYQALLKYSREVQERHGYREIAAPLI 238

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT-------------------------- 333
            ++ LW  SGHW  Y  NMF V      +K                              
Sbjct: 239 NNKKLWLISGHWAHYINNMFMVPGVSGWLKADAEIPGILENLAEQGEEPKNVKIQAGSVL 298

Query: 334 --------FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRG 385
                    A KPMNCP  +  +    +SYRELP+R +E+  ++R E SG ++GL RV+ 
Sbjct: 299 YNRERMDTMAAKPMNCPNAMLTYKRKNRSYRELPIRYSEYDVLHRKEKSGQMNGLFRVQE 358

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
           F QDD H F  + Q+ +E   I ++   IY  FG      +LSTRPE  +G   +WD AE
Sbjct: 359 FRQDDDHTFVMESQIEDEIKDIISIADEIYSTFGVSY-RAELSTRPEDFMGDIEVWDRAE 417

Query: 446 NIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSR 505
             +K +L              +  G+GAFYGPK +  +KDA+GR+WQCGTIQ+DF LP  
Sbjct: 418 AALKRILTNKYGEGG----FEINEGDGAFYGPKIDLQIKDALGREWQCGTIQLDFQLPHN 473

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAV 565
           F   Y  +      PV+IHRA++GS+ERFIGI+IENFKG  P WLS  Q  +  I +   
Sbjct: 474 FGLSYQTAEGVAAMPVVIHRAIYGSLERFIGIIIENFKGVFPFWLSSEQVGIVPIRTEHN 533

Query: 566 EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
            YA+++ +LL+ H + +E D+    +  KI+++   K P I++ GD+EA+E ++ I   G
Sbjct: 534 AYAKKVFSLLQKHGIRVEADYSESNMKEKIKKYKNFKDPYILVLGDREAAENTVSINMRG 593

Query: 626 -STTTQKVSLLDAIPI 640
            +     + +   + +
Sbjct: 594 SNRQLNNIPIERFLAM 609


>gi|13358098|ref|NP_078372.1| threonyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|170761869|ref|YP_001752619.1| threonyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           27815]
 gi|171920446|ref|ZP_02690665.2| threonyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC
           27813]
 gi|183508529|ref|ZP_02958053.1| threonyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC
           33697]
 gi|186701866|ref|ZP_02971526.1| threonyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC
           27818]
 gi|13959578|sp|Q9PPV6|SYT_UREPA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|189083629|sp|B1AJH5|SYT_UREP2 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|11271125|pir||H82878 threonyl-tRNA synthetase UU534 [imported] - Ureaplasma urealyticum
 gi|6899538|gb|AAF30947.1|AE002152_6 threonyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|168827446|gb|ACA32708.1| threonyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           27815]
 gi|171902899|gb|EDT49188.1| threonyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC
           27813]
 gi|182675966|gb|EDT87871.1| threonyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC
           33697]
 gi|186701170|gb|EDU19452.1| threonyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC
           27818]
          Length = 580

 Score =  465 bits (1195), Expect = e-128,   Method: Composition-based stats.
 Identities = 209/582 (35%), Positives = 337/582 (57%), Gaps = 26/582 (4%)

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSD---ELAQIEKKMQEI 129
           + HS AH++A A+   +P + +AIGP I++GFYYDF+   P +S    +L +IEK+M++I
Sbjct: 8   LNHSAAHLLAMALTKFYPNLSLAIGPTIDEGFYYDFNLNDPNTSITPLDLLKIEKEMKKI 67

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
             +   F  + +++EKA+ELF+     YK++I+E      ++++Y  G+WFDLC+GPHV+
Sbjct: 68  TTQALTFDYEQVTYEKAKELFK--HNKYKLDIIEQNKNN-SLSIYHSGKWFDLCKGPHVQ 124

Query: 190 STGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKL 249
           +T ++K   KL+ +AG+YWRGD+N   L RIYG A++ Q +L  YL  L+E ++RDHRK+
Sbjct: 125 NTKEIK-AIKLLNIAGSYWRGDANNDQLIRIYGVAFSDQDQLDAYLKDLQERKERDHRKI 183

Query: 250 AREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQ 307
            ++++LF        G+  W   G  I   +  ++   + + +++ + TP +    L++ 
Sbjct: 184 GKDLNLFTFNNLAGQGLPIWLPNGTIIKNQVQKFINEVEFQFNFDTVITPILGSIDLYKT 243

Query: 308 SGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGS 367
           SGHWD Y+ N+F+    D+ I       L+PM CP H  V+++ L+SYR LP+RL+E   
Sbjct: 244 SGHWDHYKDNIFSPVQIDNEI-----LVLRPMTCPHHTLVYSNELRSYRSLPIRLSEHSI 298

Query: 368 VYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKL 427
           ++R E SG L G  RVR    +D HVFC  +Q+ +E +    +I    +  G +   + L
Sbjct: 299 LHRYESSGGLTGFERVREMILEDCHVFCRFDQIEHEVINAFKMIQEAQEGLGIKTFEIHL 358

Query: 428 STRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           S               +W+ ++N+++ +L          I    ++GE AFYGPK ++ +
Sbjct: 359 SLNDPNDKEKYYDDPQMWEQSQNVLRKMLKD------HNIPYKEMVGEAAFYGPKIDFQV 412

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           K  + R     TIQ+DF LP+RFN  Y+N  +E+  PVMIH  + G+ ER + I++E  K
Sbjct: 413 KTVLNRIITVSTIQLDFLLPNRFNLTYINESNEQSVPVMIHIGIIGTYERLLAILLEQTK 472

Query: 544 GNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
           G LPLWLSPIQ ++  +  +   +Y +E+   L+ H +    D RNE ++ KIRE  I+K
Sbjct: 473 GILPLWLSPIQVVIIPVNENLHTDYVKELNIKLRKHLIRSNVDLRNERLSKKIREAQIQK 532

Query: 603 IPIIIICGDKEASERS-IGIRRFGSTTTQKVSLLDAIPILTK 643
           IP  I+ GD+E      +  R +GS  T  VS+ D I +L  
Sbjct: 533 IPYQIVIGDEEIKNNKMVTYRCYGSEKTTTVSITDFINMLEN 574


>gi|19386908|gb|AAL87030.1|AF332624_1 threonyl-tRNA-synthetase [Azotobacter vinelandii]
          Length = 461

 Score =  463 bits (1192), Expect = e-128,   Method: Composition-based stats.
 Identities = 225/465 (48%), Positives = 304/465 (65%), Gaps = 16/465 (3%)

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            D+CRGPHV +T  +K F KL K++GAY   D+    L R+YGTA + +Q    Y+  +E
Sbjct: 1   VDMCRGPHVPNTRFLKAF-KLTKLSGAY-SRDAKNEQLQRVYGTAGHKKQLA-AYIQRIE 57

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+EKRDHRKL + +DLFH  E+  G++FWH  GW ++Q L  YMR  + ++ Y EI TPQ
Sbjct: 58  EAEKRDHRKLGKRLDLFHTQEEAPGMVFWHPNGWTVYQVLEQYMRAVQRENGYLEIKTPQ 117

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHW +Y  NMF       T  + R +A+KPMNCP HV V+N GLKSYREL
Sbjct: 118 VVDRVLWEKSGHWANYAENMFT------TESESRDYAIKPMNCPCHVQVYNQGLKSYREL 171

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RLAEFG+ +RNEPSG+LHG+MRVRGFTQDDAH+FCT+EQM  E      L   +Y DF
Sbjct: 172 PLRLAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEEQMQAESAAFIKLTRQVYADF 231

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+ I +KLSTRPE+RVGS  LWD      +             +   +  GEGAFYGPK
Sbjct: 232 GFQDIQLKLSTRPERRVGSGELWD------RAEEALAAALESAGLPYELQPGEGAFYGPK 285

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD +GR WQCGT+Q+DFNLP R  A YV+ ++E+ HPVM+HRA+ GS ERFIGI+
Sbjct: 286 IEFSLKDCLGRVWQCGTLQLDFNLPVRLGAEYVSENNERQHPVMLHRAILGSFERFIGIL 345

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+++G  P WL+P QA++  IT    E+A E+   L       + D RNE I +KIREH
Sbjct: 346 IEHYEGAFPAWLAPTQAVIMNITDKQGEFALEVERTLNQGGFRAKCDLRNEKIGFKIREH 405

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           ++ K+P +++ GD+E    S+ +R         + +     +L +
Sbjct: 406 TLLKVPYLLVIGDREVETHSVAVRTREGVDLGTMPVEQFREMLAQ 450


>gi|255582427|ref|XP_002532001.1| threonyl-tRNA synthetase, putative [Ricinus communis]
 gi|223528332|gb|EEF30374.1| threonyl-tRNA synthetase, putative [Ricinus communis]
          Length = 658

 Score =  462 bits (1189), Expect = e-128,   Method: Composition-based stats.
 Identities = 234/618 (37%), Positives = 348/618 (56%), Gaps = 34/618 (5%)

Query: 29  SISRSLAKKAVAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSI 88
           SIS ++A    A      + + +       I + T E    L  IRH+CAH+MA AVQ +
Sbjct: 62  SISTAVATTESAPVAQNDIAEDTQKEETEKIVLPTNESSEKLLRIRHTCAHVMAMAVQKV 121

Query: 89  WPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE 148
           +PE +V IGP IE+GFYYDFD E P +  +L +I+K+M  II ++ P +++ +S E+A++
Sbjct: 122 YPEAKVTIGPWIENGFYYDFDME-PLTDKDLKRIKKEMDRIIGQNLPLVREEVSREEAQK 180

Query: 149 LFESKKEAYKVEILESIPAKENVTLYRQGE-WFDLCRGPHVRSTGQV-KKFFKLMKVAGA 206
              +  E YK+EIL+SI     +T+Y  G+ W+DLC GPHV STG + +K  +L  VAGA
Sbjct: 181 RIMAVNEPYKMEILDSIKEDP-ITIYHIGDEWWDLCAGPHVESTGNINRKAVELESVAGA 239

Query: 207 YWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGV 265
           YWRGD  RPML RIYGTAW  + +L  YL+F EE+++RDHR+L +++DLF I ++ G G+
Sbjct: 240 YWRGDEKRPMLQRIYGTAWENENQLKAYLHFKEEAKRRDHRRLGQDLDLFSIQDEAGGGL 299

Query: 266 IFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCA 324
           +FWH KG  +   +    ++  I+ DY+ + TP V    LW+ SGH D YR NM+     
Sbjct: 300 VFWHPKGAIVRHIIEDSWKKIHIEHDYDLLYTPHVAKADLWKISGHLDFYRENMYDQMKI 359

Query: 325 DDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVR 384
           +D       + L+PMNCP H+ V+   L SYR+ P+R+AE G+VYR E SGSLHGL RVR
Sbjct: 360 ED-----ENYQLRPMNCPYHILVYKRKLNSYRDFPIRVAELGTVYRYELSGSLHGLFRVR 414

Query: 385 GFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
           GFTQ               C+ + + I         +  ++         V S       
Sbjct: 415 GFTQ---------------CILVLSFID-------LQSGLLFQLIPRYSPVPSFNSHSFF 452

Query: 445 ENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPS 504
              +  +L  +  +++  I   +   +        +  +            +QVDFNLP 
Sbjct: 453 PVCLSAILVCLWCTARFPICWKLFSLQDLLALMHGDVEIVLLNHNCSLKFLMQVDFNLPQ 512

Query: 505 RFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA 564
           RF+  YV+S+SEK  P+MIHRAV GS+ERF G++IE++ G+ PLWLSPIQ  V  +T + 
Sbjct: 513 RFDITYVDSNSEKKRPIMIHRAVLGSMERFFGVLIEHYAGDFPLWLSPIQVRVLPVTDTQ 572

Query: 565 VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRF 624
           +EY +E+ + LK + +  E  F  E +   IR    +KIP++ + G KE   +S+ IR  
Sbjct: 573 LEYCREVTSKLKENGIRTEL-FHGERLPKLIRNAEKQKIPLMAVVGPKEVETQSVTIRSR 631

Query: 625 GSTTTQKVSLLDAIPILT 642
            S     +++ D I  + 
Sbjct: 632 FSGELGTMTIDDFISRIK 649


>gi|330802268|ref|XP_003289141.1| hypothetical protein DICPUDRAFT_35169 [Dictyostelium purpureum]
 gi|325080808|gb|EGC34348.1| hypothetical protein DICPUDRAFT_35169 [Dictyostelium purpureum]
          Length = 679

 Score =  462 bits (1188), Expect = e-128,   Method: Composition-based stats.
 Identities = 196/660 (29%), Positives = 338/660 (51%), Gaps = 42/660 (6%)

Query: 6   KLTFPDGSIKNFPV-HATGSDVAESISRSLAKKAVAVAIN-GKVCDLSDPVR--EGSIEI 61
           K+   DG I +F   + T  D+ + I +S  K  +   +N  ++ +L +P+   + +IE 
Sbjct: 32  KVRLNDGRILDFDQDNITPQDIIKKIGKSNFKHTLTSRVNSNQLVNLKEPIELNDFNIEF 91

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEV-QVAIGPIIEDGFYYDFDKEQ---PFSSD 117
           +  ED        ++ + ++A A++  +    + ++  +++  F+ D    +       +
Sbjct: 92  LDFEDLEVRKAFWNTSSLVLAAAIKEHYKNTTEFSVDSVLQGSFFVDVYFSKSSMTIKEE 151

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN--VTLYR 175
           ++ +I+K M+  I ++    K  +  +KA+ LF +        IL++    EN  V +  
Sbjct: 152 DIKRIKKIMEHFIKQNEAIQKFAIPQDKAKLLFCTNP-----AILKTFTEGENKDVQVID 206

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
               + L +   +    +++    +   +      D +   L RI G ++  + ++  + 
Sbjct: 207 LNGHYFLEKFKPLEPIAKIQSLDLIKNSSVV--GDDPSYTKLQRIVGISFPEKAQMKNWE 264

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEI 294
              +++  RDHR + +  +LF       G  F+   G KI+  L++++R + +   Y+E+
Sbjct: 265 DLSKKASLRDHRLIGKNQELFFFHPFSPGSCFFLPHGTKIYNKLLNFLRSEYRRRGYQEV 324

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
            TP +  Q LW+QSGHW +Y+ NMF+ +C      D   ++LKPMNCPGH  +F H  +S
Sbjct: 325 ITPNIYSQKLWEQSGHWQNYKDNMFSFEC------DHTHYSLKPMNCPGHCLMFAHRQRS 378

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           Y+ELP+R+A+FG ++RNE  GSL GL RVR F QDDAH+FCT + +  E  +  + +  +
Sbjct: 379 YKELPMRIADFGVLHRNESHGSLTGLTRVRRFQQDDAHIFCTPDMIREEIAQCLDFMKFV 438

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           Y  F F   + +LSTRP+  +G   +WD AEN +  VL     +        +   +GAF
Sbjct: 439 YSVFNFTFHL-ELSTRPDSFLGDIEVWDKAENALSQVLTEFCGNQWK-----INPKDGAF 492

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK--------CHPVMIHRA 526
           YGPK +  LKDA G+  QC TIQ+DF LP RFN  Y +   E+          PVMIHRA
Sbjct: 493 YGPKIDIHLKDANGKSHQCATIQLDFQLPIRFNLEYNDGKKEETENQQSAVNRPVMIHRA 552

Query: 527 VFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF 586
           +FGS+ER + I++E+  G  P WLSP Q IV +++ +   +A EI + L    + I+ D 
Sbjct: 553 LFGSVERMMAILMEHTGGKWPFWLSPRQCIVVSVSKAFNNHALEIQSKLNQSMVDIDVDV 612

Query: 587 RNET--INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ--KVSLLDAIPILT 642
                 I  K+ E +  +   II+ G +E+    + +R   S + +  K+S+ D +    
Sbjct: 613 DISDNLIAKKVFEATHLQYNYIIVIGQEESDSGILSVRERDSKSKENRKLSIDDLLSEFK 672


>gi|50364993|ref|YP_053418.1| threonyl-tRNA synthetase [Mesoplasma florum L1]
 gi|50363549|gb|AAT75534.1| threonyl-tRNA synthetase [Mesoplasma florum L1]
          Length = 644

 Score =  462 bits (1188), Expect = e-127,   Method: Composition-based stats.
 Identities = 193/650 (29%), Positives = 329/650 (50%), Gaps = 23/650 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           +K+   DGSIK F        +AE+I+ SL K   A  +NG+   +   +  + ++E+IT
Sbjct: 1   MKIKLLDGSIKEFDQATNVRTIAETIAISLKKATAAAKVNGRYVSVDYVIEKDSNLELIT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYY--DFDKEQPFSSDELAQ 121
                    + ++ A +   A+  ++ +V++A     ED   Y   F+ E     +EL  
Sbjct: 61  NRHEDFYKTLNYTAAFVTGVAISELYKDVKLAKVLYKEDELEYGITFEVEPRIGLEELQN 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-ENVTLYRQGEWF 180
           I+ K+ +II  +   L + +  ++A E+F+     Y++ + + +      +T+Y      
Sbjct: 121 IQNKVNQIIK-NESILSKEMDLKEAEEIFK--GNQYQLHLAKEMFETYGEITVYTLNGVS 177

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
            + + P   +   +K   ++ ++ G YW  DS   ML +++G A  + + L+     LE+
Sbjct: 178 IVSKHPITLNLKNIKVV-EVQQLTGEYWLNDSKNIMLQKVHGMAAESIETLSSKKEILED 236

Query: 241 SEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
              RDHR + + + +F      G G+  W   G  + + +  Y++ K  + DY  + TP 
Sbjct: 237 RRSRDHRIINKTLKIFGFDHLVGPGLPLWMPNGTIVKEEIKKYLKEKEWEYDYINVTTPV 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    L+++SGHWD Y  +M   +  +        F L+PMNCP HVAV+    +SYR+L
Sbjct: 297 IGTVELYKKSGHWDHYGEDM--FQPFNGGSGSDEQFILRPMNCPHHVAVYKQEQRSYRDL 354

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AE    +R E SGSL GL RVR     D+H+F   +Q+  E   I+ LI  + + F
Sbjct: 355 PLRIAEHALQHRYESSGSLTGLERVRAMELTDSHIFVRPDQVEAEFKSIYKLITEVLETF 414

Query: 419 GFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
             +   + LS R  +        D +WD+AE  ++ VL  +       I+    +GE AF
Sbjct: 415 NIQIDYLSLSLRDPEDKVKYYQDDKMWDEAEAALEKVLQDLN------IDYKKCIGEAAF 468

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  +K A   +    TIQ+DF LP +F+  Y++ + E   P+MIHR + G+ ERF
Sbjct: 469 YGPKLDIQIKTAQNHEITVSTIQLDFLLPKKFDVTYIDQNQEFKAPIMIHRGLIGTYERF 528

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTI-TSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           I  ++E  KG LPLWL+P Q  +  + +   +EYA E+   LK   +    D R+E ++Y
Sbjct: 529 IATLLEQTKGVLPLWLAPNQIEIIPVGSEENIEYANEVKKQLKKDFIRTHVDLRDERLSY 588

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           KIR+    KIP  ++ GD+E  + S+  R++GS     + L +   ++T 
Sbjct: 589 KIRDAQTSKIPYQLVLGDQERKDNSVTYRQYGSEQQTTIKLNEFKNMITD 638


>gi|297844762|ref|XP_002890262.1| hypothetical protein ARALYDRAFT_889225 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297336104|gb|EFH66521.1| hypothetical protein ARALYDRAFT_889225 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 620

 Score =  461 bits (1187), Expect = e-127,   Method: Composition-based stats.
 Identities = 192/627 (30%), Positives = 317/627 (50%), Gaps = 54/627 (8%)

Query: 50  LSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP--IIEDGFYY 106
           ++ P+  + S+EI   +  +      HS AHI+ +A++  +   ++ IGP   I++GFYY
Sbjct: 1   MNRPLEGDCSVEIFGFDSVQGRDTFWHSSAHILGQALEQEY-GCKLCIGPCKTIDEGFYY 59

Query: 107 D--FDKEQPFSSDELAQIEKKMQEII-------------------------------ARD 133
           D  +  +   + D    IE+   +                                    
Sbjct: 60  DAFYHGDLGLNDDHFPHIEEGAAKSALVWLLLVTVICLLNVVCHPIFSVPILFISTSQEG 119

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILES-IPAKENVTLYRQGEWFDLCRGPHVRSTG 192
            PF +  ++ ++A E+       +KVEI+   +   E  T+YR G   DLCRGPH+ +T 
Sbjct: 120 QPFERILVTKDQALEM--FSDNLFKVEIINDNLAEDETTTVYRCGPLVDLCRGPHIPNTS 177

Query: 193 QVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLARE 252
            VK F K +K + A+W+GD +R  L R+YG ++   ++L  YL  +EE++  DHR   ++
Sbjct: 178 FVKAF-KCLKASSAHWKGDKDRESLQRVYGISYPDDKQLKDYLKSIEEAKIYDHRLSGQQ 236

Query: 253 MDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHW 311
            +LF       G   +   G +++  L+ + +++     Y E+ TP +     W+ S H 
Sbjct: 237 QELFFSHPLSPGNCIYLPHGTRVYNKLMEFFKKEYWKMGYTEVITPVIYTMDFWETSRHA 296

Query: 312 DSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRN 371
           + Y+ NMF +      +  +  + +K MNC GH  +F H +    +LP++LA+FG +Y+N
Sbjct: 297 EYYQKNMFKLDFQTPGLTVIHNYGIKHMNCQGHCLMFRHSV----QLPIKLADFGPLYQN 352

Query: 372 EPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP 431
           E S  L GL RVR F QDDAH+FC++ Q+  E   I + +   Y  FGF   + KLSTRP
Sbjct: 353 EASEDLSGLTRVRQFQQDDAHIFCSETQVKEEVRGILDFVDYAYTKFGFTYEL-KLSTRP 411

Query: 432 EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDW 491
           +K +G    WD AE  ++  L+    +           G+G FYGPK +  + DA+ R +
Sbjct: 412 KKYLGDLEKWDKAEKDLEEALNDFGKTWVK------NKGDGEFYGPKIDITVYDAMKRKF 465

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL 550
           QC TIQ+DF+LP RF   Y      E    V+IHRAV GS+ER   I++E +KG LP WL
Sbjct: 466 QCATIQLDFHLPDRFKLEYSAEDETEIESSVLIHRAVLGSVERLFAILLEQYKGKLPFWL 525

Query: 551 SPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           SP QAIV +++  +  YA ++ + +      ++ D  + T++ K++E  + +   I+  G
Sbjct: 526 SPRQAIVCSVSEDSRSYANKVRDQIHEAGYYVDVDTTDRTVSEKVQEAQVAQYNYILAVG 585

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDA 637
           D+EA    + +       + +  L + 
Sbjct: 586 DEEARTGQVTVWLRDEMMSFETLLDEF 612


>gi|302855151|ref|XP_002959075.1| hypothetical protein VOLCADRAFT_70347 [Volvox carteri f.
           nagariensis]
 gi|300255572|gb|EFJ39869.1| hypothetical protein VOLCADRAFT_70347 [Volvox carteri f.
           nagariensis]
          Length = 563

 Score =  461 bits (1187), Expect = e-127,   Method: Composition-based stats.
 Identities = 221/581 (38%), Positives = 321/581 (55%), Gaps = 41/581 (7%)

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK--EQPFSSD 117
           E+ T ++   L  IRHSCAHIMA AVQ ++  VQV IGP  + GF+YDF    + P +  
Sbjct: 2   ELKTSDESEQLLRIRHSCAHIMAMAVQRLYKGVQVTIGPWTDRGFFYDFHWPADSPITEK 61

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +L +I+K+M +II  D PF+++ ++ E+A     +  E YK+EIL+SI  ++ +T     
Sbjct: 62  DLKKIKKEMAKIIRADLPFVREEVTPEEAEARIRAAGEPYKLEILQSIL-QQPLTEPFIT 120

Query: 178 EWFDLCRGPHVRSTGQVKK-FFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
            W+DLC GPHV  TG +     +L  +AGAYWRG+    ML+RIYGTAW T ++L  Y  
Sbjct: 121 PWWDLCAGPHVNRTGDINPDAVELESIAGAYWRGNEQNEMLTRIYGTAWETPEQLKAYEQ 180

Query: 237 FLEESEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEI 294
             EE+ KRDHRKL  E++LF I    G G+++WH KG  +   + ++ +   +   Y+ +
Sbjct: 181 LKEEAAKRDHRKLGTELNLFSIQENSGGGLVYWHPKGALVRHLIETFWKELHLSRGYQLV 240

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
            +P +    LW+ SGH + Y+ NM+     +D      ++ L+PMNCP H++V+  G  S
Sbjct: 241 YSPHIAKADLWRTSGHLEFYKENMYEQMKVED-----ESYQLRPMNCPFHISVYKDGYYS 295

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YR+LP+RLAE G+VYR E SG++HGL RVRGFTQDDAH+FC   Q+ +E   + +L+   
Sbjct: 296 YRDLPLRLAELGTVYRYERSGTMHGLFRVRGFTQDDAHIFCLPNQITSEIKGVLDLVEET 355

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
              FGF +  + LSTRPEK VG D +W  AE  +   L           N  V  G GAF
Sbjct: 356 LGTFGFHEYEINLSTRPEKSVGDDVIWSTAEAALVEAL------GAKGWNYQVDAGGGAF 409

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSR--FNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           YGPK +  ++DAIGR WQC TIQ+DFNLP R  F      +      P  ++  V     
Sbjct: 410 YGPKIDIKIRDAIGRKWQCSTIQLDFNLPERLVFAVAITLTPFSAETPAFLNCCVL---- 465

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
                         P      Q  + T+  +  EYA+++A  +K   + +E      ++ 
Sbjct: 466 --------------PFV---RQVRLLTVNDTVAEYARDVAAQMKRAGIRVEV-VGEASMG 507

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
             IR     KIP+I + G KEA   S+ +R +G      + 
Sbjct: 508 KLIRNAEKAKIPVICVVGVKEADGNSLSVRLYGGKELGALP 548


>gi|301303993|ref|ZP_07210111.1| threonyl-tRNA synthetase [Escherichia coli MS 124-1]
 gi|300840790|gb|EFK68550.1| threonyl-tRNA synthetase [Escherichia coli MS 124-1]
          Length = 429

 Score =  461 bits (1185), Expect = e-127,   Method: Composition-based stats.
 Identities = 212/438 (48%), Positives = 298/438 (68%), Gaps = 13/438 (2%)

Query: 216 MLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKI 275
           ML RIYGTAW  ++ L  YL  LEE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW I
Sbjct: 1   MLQRIYGTAWADKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTI 60

Query: 276 FQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           F+ L  ++R K+K+  Y+E+  P ++D+ LW+++GHWD+Y+  MF       T  + R +
Sbjct: 61  FRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFT------TSSENREY 114

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
            +KPMNCPGHV +FN GLKSYR+LP+R+AEFGS +RNEPSGSLHGLMRVRGFTQDDAH+F
Sbjct: 115 CIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIF 174

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDT 454
           CT+EQ+ +E      L+  +Y  FGFEKI+VKLSTRPEKR+GSD +WD AE  +   L+ 
Sbjct: 175 CTEEQIRDEVNGCIRLVYDMYSTFGFEKIVVKLSTRPEKRIGSDEMWDRAEADLAVALE- 233

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH 514
                ++ I     LGEGAFYGPK E+ L D + R WQCGT+Q+DF+LPSR +A YV   
Sbjct: 234 -----ENNIPFEYQLGEGAFYGPKIEFTLYDCLDRAWQCGTVQLDFSLPSRLSASYVGED 288

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANL 574
           +E+  PVMIHRA+ GS+ERFIGI+ E F G  P WL+P+Q ++  IT S  +Y  E+   
Sbjct: 289 NERKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVIMNITDSQSDYVNELTQK 348

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           L +  + ++ D RNE I +KIREH+++++P +++CGDKE     + +R         + +
Sbjct: 349 LSNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSMDV 408

Query: 635 LDAIPILTKESLPPDCQK 652
            + I  L +E      ++
Sbjct: 409 NEVIEKLQQEIRSRSLKQ 426


>gi|116179548|ref|XP_001219623.1| hypothetical protein CHGG_00402 [Chaetomium globosum CBS 148.51]
 gi|88184699|gb|EAQ92167.1| hypothetical protein CHGG_00402 [Chaetomium globosum CBS 148.51]
          Length = 716

 Score =  460 bits (1184), Expect = e-127,   Method: Composition-based stats.
 Identities = 213/701 (30%), Positives = 321/701 (45%), Gaps = 137/701 (19%)

Query: 3   SDIKLTFPDGSIKNF-PVHATGSDVAESISRSLAKKAVAVAINGK-VCDLSDPVRE-GSI 59
            +I +T PDG++K       T +D+A+ IS SL K+ V   I+G+ + D+  P+ +   +
Sbjct: 71  DEILITMPDGTVKPGKAYETTPADIAKGISNSLYKRTVVARIDGEHLWDIERPIEKSCKL 130

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD--KEQPFSSD 117
           E++   D +   V                           +++GFYY+          S 
Sbjct: 131 ELLDFNDDQGKFVF-------------------------SVDNGFYYEMALPGGAAVQST 165

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES-IPAKENVTLYRQ 176
           + A +E  + +I+    PF +  +S E   ++       YKV I+   I      T+YR 
Sbjct: 166 DWAPLESIVTKIVKEKQPFQRLEMSKENLLKM--FAYNPYKVHIINDKIADGTRTTVYRN 223

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           G                              + GD+N   L RIYG ++  ++++  +  
Sbjct: 224 GPLI---------------------------FLGDANNDSLQRIYGVSFPDKKQMAAHKK 256

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEIN 295
           FLEE+ KRDHR + ++ +LF+  E   G   W   G +I   ++ Y+R +    DY+E+ 
Sbjct: 257 FLEEAAKRDHRLIGKQQELFYFEESSPGSAMWLPHGMRINNAIMDYIREEYWKRDYDEVM 316

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP + +  LW+QSGH   Y+ +MF +        D   F LKPMNCPGH           
Sbjct: 317 TPNMFNVSLWEQSGHLAHYKEDMFLLDV------DKEQFGLKPMNCPGH----------- 359

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           +ELP+RLA+FG ++RNE SG+L GL RVR F QDDAH+FC ++Q+  E   + + + S Y
Sbjct: 360 KELPLRLADFGVLHRNEASGALSGLTRVRRFQQDDAHIFCREDQIKEEVADLFDFMSSFY 419

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
              G    + KLSTRP+K +G  + WD AE  +K  L+    ++ + +   +  G+GAFY
Sbjct: 420 GMLGLTFKL-KLSTRPDKFMGEISTWDSAEARLKEALNEF-AAANEGVTWELNAGDGAFY 477

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC----------------- 518
           GPK +  +     R WQC TIQ+DF  P  F+  Y  + S +                  
Sbjct: 478 GPKVDIAVL----RQWQCATIQLDFQQPINFSLEYQTAESVQKDKKDAAPAPAPAPAPVP 533

Query: 519 --------------------------------HPVMIHRAVFGSIERFIGIMIENFKGNL 546
                                            PVMIHRA+ GSIERF  I+ E+F G  
Sbjct: 534 APVPDGTAEEKKDGREKKKPLLVKKPLAPGCARPVMIHRAMAGSIERFTAILAEHFAGKW 593

Query: 547 PLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPII 606
           P W+SP Q IV  +    + YA+E+A LLK     ++ D    T+  KIR   + +    
Sbjct: 594 PYWMSPRQVIVIPVGMGFLGYAKEVAALLKKERFHVDVDSSGNTLQKKIRNGQLAQYNFC 653

Query: 607 IICGDKEASERSIGIRRFGSTTTQK----VSLLDAIPILTK 643
            + GD E   R + IR    T+TQ     V L DAI  L K
Sbjct: 654 FVVGDDEMRNRKVNIRYRDDTSTQARDVPVDLEDAIEKLRK 694


>gi|332265242|ref|XP_003281637.1| PREDICTED: probable threonyl-tRNA synthetase 2, cytoplasmic isoform
           2 [Nomascus leucogenys]
          Length = 713

 Score =  460 bits (1183), Expect = e-127,   Method: Composition-based stats.
 Identities = 185/476 (38%), Positives = 271/476 (56%), Gaps = 17/476 (3%)

Query: 171 VTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQE 230
            T+YR G   DLC+GPHVR TG++K   K+ K +  YW G+     L RIYG ++   + 
Sbjct: 239 TTVYRCGPLIDLCKGPHVRHTGKIKTI-KIFKNSSTYWEGNPEMETLQRIYGISFPDNKM 297

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-D 289
           +  +    EE++ RDHRK+ +E +LF   +   G  F+  +G  I+ TL  ++R +    
Sbjct: 298 MRNWEKSQEEAKNRDHRKIGKEQELFFFHDLSPGSCFFLPRGAFIYNTLTDFIREEYHKR 357

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
           D+ E+ +P + +  LW+ SGHW  Y  NMF  +   DT      FALKPMNCPGH  +F 
Sbjct: 358 DFTEVLSPNMYNSKLWEASGHWQHYSENMFTFEIEKDT------FALKPMNCPGHCLMFA 411

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
           H  +S+RE+P+R A+FG ++RNE SG+L GL RVR F QDDAH+FCT EQ+  E      
Sbjct: 412 HRPRSWREMPIRFADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCTVEQIEEEIKGCLQ 471

Query: 410 LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL 469
            + S+Y  FGF   +  LSTRPE  +G   +W++AE  ++  L       +      +  
Sbjct: 472 FLQSVYSTFGFSFQLN-LSTRPENFLGEIEMWNEAEKQLQSSLMDFGEPWK------MNP 524

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVF 528
           G+GAFYGPK +  +KDAIGR  QC TIQ+DF LP RFN  YV+    +K  PV+IHRA+ 
Sbjct: 525 GDGAFYGPKIDIKIKDAIGRYHQCATIQLDFQLPVRFNLTYVSKDGDDKKRPVIIHRAIL 584

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FR 587
           GS+ER I I+ EN+ G  P WLSP Q +V  +  +  +YA ++++         + D   
Sbjct: 585 GSVERMIAILSENYGGKWPFWLSPHQVMVIPVGPACEKYALQVSSEFFEEGFMADVDLDH 644

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           N T+N KIR   + +   I++ G+KE    ++ +R   +    ++ +  AI  L  
Sbjct: 645 NCTLNKKIRNAQLAQYNFILVVGEKEKVNNAVNVRTRDNKIHGEILVTSAIDKLKN 700



 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 56/390 (14%), Positives = 122/390 (31%), Gaps = 48/390 (12%)

Query: 2   PSDIKLTFPDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
            + I +    G          T   VA  IS+ LA+  V   +NG++ DL  P+  +  +
Sbjct: 165 SNIITVRVAGGQTVQGEVWKTTPYQVAAEISQELAESTVIAKVNGELWDLDRPLEGDSFL 224

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSD-- 117
           E++T ++            H  A  V    P + +  GP +         K    SS   
Sbjct: 225 ELLTFDNEE---------VHTAATTVYRCGPLIDLCKGPHVRHTGKIKTIKIFKNSSTYW 275

Query: 118 ----ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFE-SKKEAYKVEILESIPAKENVT 172
               E+  +++        +        S E+A+        +  ++     +       
Sbjct: 276 EGNPEMETLQRIYGISFPDNKMMRNWEKSQEEAKNRDHRKIGKEQELFFFHDLSPGSCFF 335

Query: 173 LYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAG---------AYWRGDSNRPMLSRIYGT 223
           L R G +        +R     + F +++              +W+  S       I   
Sbjct: 336 LPR-GAFIYNTLTDFIREEYHKRDFTEVLSPNMYNSKLWEASGHWQHYSENMFTFEIEKD 394

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYM 283
            +  +                 H    R      +    +     HR       + ++ +
Sbjct: 395 TFALKPM-----NCPGHCLMFAH----RPRSWREMPIRFADFGVLHRNELSGTLSGLTRV 445

Query: 284 RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPG 343
           RR  +DD     T +     + ++      +  ++++       +      + +P N  G
Sbjct: 446 RRFQQDDAHIFCTVE----QIEEEIKGCLQFLQSVYSTFGFSFQLN----LSTRPENFLG 497

Query: 344 HVAVFNHGLKSYRELPVRLAEFGSVYRNEP 373
            + ++N    + ++L   L +FG  ++  P
Sbjct: 498 EIEMWNE---AEKQLQSSLMDFGEPWKMNP 524


>gi|114659241|ref|XP_001144153.1| PREDICTED: hypothetical protein [Pan troglodytes]
 gi|332844841|ref|XP_001144319.2| PREDICTED: probable threonyl-tRNA synthetase 2, cytoplasmic isoform
           1 [Pan troglodytes]
          Length = 707

 Score =  460 bits (1183), Expect = e-127,   Method: Composition-based stats.
 Identities = 186/484 (38%), Positives = 273/484 (56%), Gaps = 17/484 (3%)

Query: 163 ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYG 222
                    T+YR G   DLC+GPHVR TG++K   K+ K +  YW G+     L RIYG
Sbjct: 225 NEKVNTATTTVYRCGPLIDLCKGPHVRHTGKIKTI-KIFKNSSTYWEGNPEMETLQRIYG 283

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISY 282
            ++   + +  +  F EE++ RDHRK+ +E +LF   +   G  F+  +G  I+ TL  +
Sbjct: 284 ISFPDNKMMRDWEKFQEEAKNRDHRKIGKEQELFFFHDLSPGSCFFLPRGAFIYNTLTDF 343

Query: 283 MRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           +R +    D+ E+ +P + +  LW+ SGHW  Y  NMF  +   DT      FALKPMNC
Sbjct: 344 IREEYHKRDFTEVLSPNMYNSKLWEASGHWQHYSENMFTFEIEKDT------FALKPMNC 397

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
           PGH  +F H  +S+RE+P+R A+FG ++RNE SG+L GL RVR F QDDAH+FCT EQ+ 
Sbjct: 398 PGHCLMFAHRPRSWREMPIRFADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCTVEQIE 457

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E       + S+Y  FGF   +  LSTRPE  +G   +W++AE  ++  L       + 
Sbjct: 458 EEIKGCLRFLQSVYSTFGFSFQLN-LSTRPENFLGEIEMWNEAEKQLQNSLMDFGEPWK- 515

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHP 520
                +  G+GAFYGPK +  +KDAIGR  QC TIQ+DF LP RFN  YV+    +K  P
Sbjct: 516 -----MNPGDGAFYGPKIDIKIKDAIGRYHQCATIQLDFQLPIRFNLTYVSKDGDDKKRP 570

Query: 521 VMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHL 580
           V+IHRA+ GS+ER I I+ EN+ G  P WLSP Q +V  +  +  +YA ++++       
Sbjct: 571 VIIHRAILGSVERMIAILSENYGGKWPFWLSPRQVMVIPVGPTCEKYALQVSSEFFEEGF 630

Query: 581 SIETD-FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
             + D   N T+N KIR   + +   I++ G+KE  + ++ +R   +    ++ +  AI 
Sbjct: 631 MADVDLDHNCTLNKKIRNAQLAQYNFILVVGEKEKIDNAVNVRTRDNKIHGEILVTSAID 690

Query: 640 ILTK 643
            L  
Sbjct: 691 KLKN 694



 Score = 77.1 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 56/394 (14%), Positives = 120/394 (30%), Gaps = 56/394 (14%)

Query: 2   PSDIKLTFPDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
            + I +   DG          T   VA  IS+ LA+  V   +NG++ DL  P+  + S+
Sbjct: 159 SNIITVRVADGQTVQGEVWKTTPYQVAAEISQELAESTVIAKVNGELWDLDRPLEGDSSL 218

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           E++T ++     V   +        V    P + +  GP +         K    SS   
Sbjct: 219 ELLTFDNE---KVNTATTT------VYRCGPLIDLCKGPHVRHTGKIKTIKIFKNSSTYW 269

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ--- 176
                +    +              K    +E  +E  K      I  ++ +  +     
Sbjct: 270 -----EGNPEMETLQRIYGISFPDNKMMRDWEKFQEEAKNRDHRKIGKEQELFFFHDLSP 324

Query: 177 --------GEWFDLCRGPHVRSTGQVKKFFKLMKVAG---------AYWRGDSNRPMLSR 219
                   G +        +R     + F +++              +W+  S       
Sbjct: 325 GSCFFLPRGAFIYNTLTDFIREEYHKRDFTEVLSPNMYNSKLWEASGHWQHYSENMFTFE 384

Query: 220 IYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTL 279
           I    +  +                 H    R      +    +     HR       + 
Sbjct: 385 IEKDTFALKPM-----NCPGHCLMFAH----RPRSWREMPIRFADFGVLHRNELSGTLSG 435

Query: 280 ISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPM 339
           ++ +RR  +DD     T +     + ++      +  ++++       +      + +P 
Sbjct: 436 LTRVRRFQQDDAHIFCTVE----QIEEEIKGCLRFLQSVYSTFGFSFQLN----LSTRPE 487

Query: 340 NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP 373
           N  G + ++N    + ++L   L +FG  ++  P
Sbjct: 488 NFLGEIEMWNE---AEKQLQNSLMDFGEPWKMNP 518


>gi|297697604|ref|XP_002825941.1| PREDICTED: probable threonyl-tRNA synthetase 2, cytoplasmic-like
           [Pongo abelii]
          Length = 707

 Score =  460 bits (1182), Expect = e-127,   Method: Composition-based stats.
 Identities = 186/484 (38%), Positives = 273/484 (56%), Gaps = 17/484 (3%)

Query: 163 ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYG 222
                    T+YR G   DLC+GPHVR TG++K   K+ K +  YW G+     L RIYG
Sbjct: 225 NEEVNTATTTVYRCGPLIDLCKGPHVRHTGKIKTI-KIFKNSSTYWEGNPEMETLQRIYG 283

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISY 282
            ++   + +  +  F EE++ RDHRK+ +E +LF   +   G  F+  +G  I+ TL  +
Sbjct: 284 ISFPDNKMMRNWEKFQEEAKNRDHRKIGKEQELFFFHDLSPGSCFFLPRGAFIYNTLTDF 343

Query: 283 MRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           +R +    D+ E+ +P + +  LW+ SGHW  Y  NMF  +   DT      FALKPMNC
Sbjct: 344 IREEYHKRDFTEVLSPNMYNSKLWEASGHWQHYSENMFTFEIEKDT------FALKPMNC 397

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
           PGH  +F H  +S+RE+P+R A+FG ++RNE SG+L GL RVR F QDDAH+FCT EQ+ 
Sbjct: 398 PGHCLMFAHRPRSWREMPIRFADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCTVEQIE 457

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E       + S+Y  FGF   +  LSTRPE  +G   +W++AE  ++  L       + 
Sbjct: 458 EEIKGCLQFLQSVYSTFGFSFQLN-LSTRPENFLGEIEMWNEAEKQLQNSLMDFGEPWK- 515

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHP 520
                +  G+GAFYGPK +  +KDAIGR  QC TIQ+DF LP RFN  YV+    +K  P
Sbjct: 516 -----MNPGDGAFYGPKIDIKIKDAIGRYHQCATIQLDFQLPIRFNLTYVSKDGDDKKRP 570

Query: 521 VMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHL 580
           V+IHRA+ GS+ER I I+ EN+ G  P WLSP Q +V  +  +  +YA ++++       
Sbjct: 571 VIIHRAILGSVERMIAILSENYGGKWPFWLSPRQVMVIPVGPTCEKYALQVSSEFFEEGF 630

Query: 581 SIETD-FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
             + D   N T+N KIR   + +   I++ G+KE  + ++ +R   +    ++ +  AI 
Sbjct: 631 MADVDLDHNCTLNKKIRNAQLAQYNFILVVGEKEKIDNAVNVRTRDNKIHGEILVTSAID 690

Query: 640 ILTK 643
            L  
Sbjct: 691 KLKN 694



 Score = 77.9 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 56/394 (14%), Positives = 120/394 (30%), Gaps = 56/394 (14%)

Query: 2   PSDIKLTFPDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
            + I +   DG          T   VA  IS+ LA+  V   +NG++ DL  P+  + S+
Sbjct: 159 SNIITVRVADGQTVQGEVWKTTPYQVAAEISQELAESTVIAKVNGELWDLDRPLEGDSSL 218

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           E++T ++     V   +        V    P + +  GP +         K    SS   
Sbjct: 219 ELLTFDNEE---VNTATTT------VYRCGPLIDLCKGPHVRHTGKIKTIKIFKNSSTYW 269

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ--- 176
                +    +              K    +E  +E  K      I  ++ +  +     
Sbjct: 270 -----EGNPEMETLQRIYGISFPDNKMMRNWEKFQEEAKNRDHRKIGKEQELFFFHDLSP 324

Query: 177 --------GEWFDLCRGPHVRSTGQVKKFFKLMKVAG---------AYWRGDSNRPMLSR 219
                   G +        +R     + F +++              +W+  S       
Sbjct: 325 GSCFFLPRGAFIYNTLTDFIREEYHKRDFTEVLSPNMYNSKLWEASGHWQHYSENMFTFE 384

Query: 220 IYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTL 279
           I    +  +                 H    R      +    +     HR       + 
Sbjct: 385 IEKDTFALKPM-----NCPGHCLMFAH----RPRSWREMPIRFADFGVLHRNELSGTLSG 435

Query: 280 ISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPM 339
           ++ +RR  +DD     T +     + ++      +  ++++       +      + +P 
Sbjct: 436 LTRVRRFQQDDAHIFCTVE----QIEEEIKGCLQFLQSVYSTFGFSFQLN----LSTRPE 487

Query: 340 NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP 373
           N  G + ++N    + ++L   L +FG  ++  P
Sbjct: 488 NFLGEIEMWNE---AEKQLQNSLMDFGEPWKMNP 518


>gi|16552114|dbj|BAB71241.1| unnamed protein product [Homo sapiens]
          Length = 707

 Score =  459 bits (1181), Expect = e-127,   Method: Composition-based stats.
 Identities = 185/484 (38%), Positives = 273/484 (56%), Gaps = 17/484 (3%)

Query: 163 ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYG 222
                    T+YR G   DLC+GPHVR TG++K   K+ K +  YW G+     L RIYG
Sbjct: 225 NEKVNTATTTVYRCGPLIDLCKGPHVRHTGKIKTI-KIFKNSSTYWEGNPEMETLQRIYG 283

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISY 282
            ++   + +  +  F EE++ RDHRK+ +E +LF   +   G  F+  +G  I+ TL  +
Sbjct: 284 ISFPDNKMMRDWEKFQEEAKNRDHRKIGKEQELFFFHDLSPGSCFFLPRGAFIYNTLTDF 343

Query: 283 MRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           +R +    D+ E+ +P + +  LW+ SGHW  Y  NMF  +   DT      FALKPMNC
Sbjct: 344 IREEYHKRDFTEVLSPNMYNSKLWEASGHWQHYSENMFTFEIEKDT------FALKPMNC 397

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
           PGH  +F H  +S+RE+P+R A+FG ++RNE SG+L GL RVR F QDDAH+FCT EQ+ 
Sbjct: 398 PGHCLMFAHRPRSWREMPIRFADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCTVEQIE 457

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E       + S+Y  FGF   +  LSTRPE  +G   +W++AE  ++  L       + 
Sbjct: 458 EEIKGCLQFLQSVYSTFGFSFQLN-LSTRPENFLGEIEMWNEAEKQLQNSLMDFGEPWK- 515

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHP 520
                +  G+GAFYGPK +  +KDAIGR  QC TIQ+DF LP RFN  YV+    +K  P
Sbjct: 516 -----MNPGDGAFYGPKIDIKIKDAIGRYHQCATIQLDFQLPIRFNLTYVSKDGDDKKRP 570

Query: 521 VMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHL 580
           V+IHRA+ GS+ER I I+ EN+ G  P WLSP Q +V  +  +  +YA ++++       
Sbjct: 571 VIIHRAILGSVERMIAILSENYGGKWPFWLSPRQVMVIPVGPTCEKYALQVSSEFFEEGF 630

Query: 581 SIETD-FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
             + D   + T+N KIR   + +   I++ G+KE  + ++ +R   +    ++ +  AI 
Sbjct: 631 MADVDLDHSCTLNKKIRNAQLAQYNFILVVGEKEKIDNAVNVRTRDNKIHGEILVTSAID 690

Query: 640 ILTK 643
            L  
Sbjct: 691 KLKN 694



 Score = 72.9 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 56/394 (14%), Positives = 120/394 (30%), Gaps = 56/394 (14%)

Query: 2   PSDIKLTFPDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
            + I +   DG          T   VA  IS+ LA+  V   +NG++ DL  P+  + S+
Sbjct: 159 SNIITVRAADGQTVQGEVWKTTPYQVAAEISQELAESTVIAKVNGELWDLDCPLEGDSSL 218

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           E++T ++     V   +        V    P + +  GP +         K    SS   
Sbjct: 219 ELLTFDNE---KVNTATTT------VYRCGPLIDLCKGPHVRHTGKIKTIKIFKNSSTYW 269

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ--- 176
                +    +              K    +E  +E  K      I  ++ +  +     
Sbjct: 270 -----EGNPEMETLQRIYGISFPDNKMMRDWEKFQEEAKNRDHRKIGKEQELFFFHDLSP 324

Query: 177 --------GEWFDLCRGPHVRSTGQVKKFFKLMKVAG---------AYWRGDSNRPMLSR 219
                   G +        +R     + F +++              +W+  S       
Sbjct: 325 GSCFFLPRGAFIYNTLTDFIREEYHKRDFTEVLSPNMYNSKLWEASGHWQHYSENMFTFE 384

Query: 220 IYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTL 279
           I    +  +                 H    R      +    +     HR       + 
Sbjct: 385 IEKDTFALKPM-----NCPGHCLMFAH----RPRSWREMPIRFADFGVLHRNELSGTLSG 435

Query: 280 ISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPM 339
           ++ +RR  +DD     T +     + ++      +  ++++       +      + +P 
Sbjct: 436 LTRVRRFQQDDAHIFCTVE----QIEEEIKGCLQFLQSVYSTFGFSFQLN----LSTRPE 487

Query: 340 NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP 373
           N  G + ++N    + ++L   L +FG  ++  P
Sbjct: 488 NFLGEIEMWNE---AEKQLQNSLMDFGEPWKMNP 518


>gi|261880448|ref|ZP_06006875.1| threonine-tRNA ligase [Prevotella bergensis DSM 17361]
 gi|270332871|gb|EFA43657.1| threonine-tRNA ligase [Prevotella bergensis DSM 17361]
          Length = 521

 Score =  459 bits (1180), Expect = e-127,   Method: Composition-based stats.
 Identities = 199/521 (38%), Positives = 310/521 (59%), Gaps = 16/521 (3%)

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
             +D P +++ +    A + F +  + YKVE ++       ++ Y QG + DLCRGPH+ 
Sbjct: 1   AKKDEPVVRREVGKADAMKEFNADGQTYKVEHIDQDLKDGTISTYTQGNFTDLCRGPHLV 60

Query: 190 STGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKL 249
           STG +K   K+  VAGA+WRGD+NR  ++RIYG  +  ++ L +YL  LEE++KRDHRK+
Sbjct: 61  STGSIK-AIKITSVAGAFWRGDANREQMTRIYGITFPKKKMLDEYLLMLEEAKKRDHRKI 119

Query: 250 AREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQ 307
            +EM+LF  +   G G+  W  KG ++   L   +R+ +   +Y+E+  P +  ++L+  
Sbjct: 120 GKEMELFMFSERVGKGLPIWLPKGTQLRLRLQELLRKLLKPYNYQEVIAPGIGSKNLYVT 179

Query: 308 SGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGS 367
           SGH+  Y  + F       T ++   + LKPMNCP H  ++    +SY++LP+R+AEFG+
Sbjct: 180 SGHYAHYGKDAFQ---PIRTPEEDEEYMLKPMNCPHHCEIYARKPRSYKDLPLRIAEFGT 236

Query: 368 VYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKL 427
           V R E SG LHGL RVR FTQDDAH+F   EQ+  E   + ++I  ++  FGF+    ++
Sbjct: 237 VMRYEKSGELHGLTRVRSFTQDDAHIFVRPEQVKAEFENVIDIIQKVFAIFGFDNYEAQI 296

Query: 428 STRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           S R  K     +GSD +W++++N ++         +++ I      GE AFYGPK ++++
Sbjct: 297 SLRDPKDTDKYIGSDEIWEESQNAIREACQEKGMKAREEI------GEAAFYGPKLDFMV 350

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           KDAIGR WQ GTIQVD+NLP RF   Y    + K  PVMIHRA FGS+ERF  ++IE+  
Sbjct: 351 KDAIGRRWQLGTIQVDYNLPERFKLEYTAEDNSKQVPVMIHRAPFGSLERFTAVLIEHTA 410

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G+ PLWL+P Q  +  I+    +YA E+     ++ +    D RNE I  KIR++ +K++
Sbjct: 411 GHFPLWLTPDQVAILPISEKFNDYALEVKKHFDANDVRAYIDDRNEKIGRKIRDNELKRV 470

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P ++I G+KEA+E  + +R+ G      + + D I  +  E
Sbjct: 471 PYMVIVGEKEANEGLVSMRKQGGGEQASMKITDFIQRIKDE 511


>gi|114559277|ref|XP_001168750.1| PREDICTED: threonyl-tRNA synthetase-like 1 isoform 2 [Pan
           troglodytes]
          Length = 635

 Score =  459 bits (1180), Expect = e-127,   Method: Composition-based stats.
 Identities = 194/556 (34%), Positives = 300/556 (53%), Gaps = 25/556 (4%)

Query: 112 QPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENV 171
           +     EL  +E+  QE+ A   PF +   S ++ R+LF+     +K+ ++E        
Sbjct: 88  RTIRGSELPVLERICQELTAAARPFRRLEASRDQLRQLFK--DNPFKLHLIEEKVTGPTA 145

Query: 172 TLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQEL 231
           T+Y  G   DLC+GPH+R TGQ+     L   +  +    +    L R+ G ++ T + L
Sbjct: 146 TVYGCGTLVDLCQGPHLRHTGQIGGLKLLSNSSSLWRSSGAPET-LQRVSGISFPTTELL 204

Query: 232 TQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDD 290
             +  + EE+E RDHR++ +E +LF   E   G  F+  +G +++  L++++R +     
Sbjct: 205 RAWEAWREEAELRDHRRIGKEQELFFFHELSPGSCFFLPRGTRVYNALVAFIRAEYAHRG 264

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCA----------DDTIKDLRT-FALKPM 339
           + E+ TP +    LW+QSGHW+ Y+ +MFAV+            DD+ + +    ALKPM
Sbjct: 265 FSEVKTPTLFSTKLWEQSGHWEHYQEDMFAVQPPGSDRPPSSQSDDSTRHITDTLALKPM 324

Query: 340 NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQ 399
           NCP H  +F H  +S+RELP+RLA+FG+++R E SG L GL R+R F QDDAH+FCT +Q
Sbjct: 325 NCPAHCLMFAHRPRSWRELPLRLADFGALHRAEASGGLGGLTRLRCFQQDDAHIFCTTDQ 384

Query: 400 MFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSS 459
           +  E     + + S+Y   GF   +  LSTRP   +G   LWD AE ++K  L       
Sbjct: 385 LEAEIQSCLDFLRSVYAVLGFSFRLA-LSTRPSGFLGDPCLWDQAEQVLKQALKEFGEPW 443

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
                  +  G+GAFYGPK +  L DA+GR  QCGTIQ+DF LP RF+  Y         
Sbjct: 444 D------LNSGDGAFYGPKIDVHLHDALGRPHQCGTIQLDFQLPLRFDLQYKGQAGALER 497

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH 579
           PV+IHRAV GS+ER +G++ E+  G  PLWLSP Q +V  + S   EYA+E    L++  
Sbjct: 498 PVLIHRAVLGSVERLLGVLAESCGGKWPLWLSPFQVVVIPVGSEQEEYAKEAQQSLRAAG 557

Query: 580 LSIETD-FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           L  + D     T++ +IR   +       + G KE S+R++ IR   +    +  L +A+
Sbjct: 558 LVSDLDADSGLTLSRRIRRAQLAHYNFQFVVGQKEQSKRTVNIRTRDNRRLGEWDLPEAV 617

Query: 639 PILTK--ESLPPDCQK 652
             L +   +  P+ ++
Sbjct: 618 QRLVELQNTRVPNAEE 633


>gi|291320287|ref|YP_003515549.1| threonyl tRNA synthetase [Mycoplasma agalactiae]
 gi|290752620|emb|CBH40593.1| Threonyl tRNA synthetase [Mycoplasma agalactiae]
          Length = 582

 Score =  458 bits (1178), Expect = e-126,   Method: Composition-based stats.
 Identities = 187/591 (31%), Positives = 324/591 (54%), Gaps = 33/591 (5%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQ 127
            +   + H+ +H++  AVQ ++P V++  GP  ++GFYYDFD  +  S +EL +IEK M+
Sbjct: 4   EANKPLNHTTSHLLGAAVQILYPNVKLGFGPATDEGFYYDFDFAEALSENELGKIEKLMK 63

Query: 128 EIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPA-KENVTLYRQGE-------W 179
           ++ +R+   +   +S ++    ++   + YK E+ + + +  + +T Y   +       +
Sbjct: 64  KLASRNL--VTIKISEDE----YDFANKPYKKELYDELKSQGKEITFYALQDPLNKEIVF 117

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLC G H+ ST  +K F KL+ +AGAYWRGD+    L+RIYGT+W ++ EL +YL  L 
Sbjct: 118 KDLCAGNHIESTKNIKNF-KLLSIAGAYWRGDNKNKQLTRIYGTSWESKDELDKYLALLA 176

Query: 240 ESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTP 297
           + ++RDHRK+ ++M +F  +     G   W   G  I   + + + +   K  + E+ TP
Sbjct: 177 DRKERDHRKIGKDMKIFTFSPLAGQGFPIWLENGMYIHNEIKNLVLKLDKKYGFTEVLTP 236

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
               + L++ SGH   Y+ +MF     ++      T   +PM CP H+ V+N    SYR+
Sbjct: 237 HFGAELLYKTSGHLAHYKDDMFKPLLVEN-----ETLIPRPMTCPHHIIVYNTEKHSYRD 291

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R +E   +YR E SG+L GL RVRG    + H+F   +Q+ +E  +++  I  I   
Sbjct: 292 LPIRYSEQSQLYRYEKSGALTGLERVRGMLLTEGHLFVRYDQIASEVKRMYKQIKEILSI 351

Query: 418 FGFEKIMV----KLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           F  E   +    + S   +K   +D++W+ AE++++  L+ +K   +       + GE A
Sbjct: 352 FNIEISYISLSLRDSNNKDKYFNNDSIWNKAESMLEKALNDMKVKYKK------VEGEAA 405

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  +  A+G +    TIQ+DF  P +F+  Y++ ++++  P+MIHR + G+ ER
Sbjct: 406 FYGPKIDIQIDTALGHEITVSTIQLDFLQPEKFDLSYIDKNNKEVRPIMIHRGLIGTYER 465

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
           F+ I++E  KGNLP W++P Q  +  +  S  + YA+++A  L +    ++ D  +E +N
Sbjct: 466 FVAILLEQTKGNLPFWIAPKQVTIIPVNLSENLSYAKKVAKKLLNSDFRVKIDDSDERLN 525

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            KIR   + K    +I G  E +  ++  R +G   T  VS+ D I +L K
Sbjct: 526 KKIRNAQVSKSKFQLILGSNEMNSNTVSYREYGKEETTTVSINDFIKLLKK 576


>gi|84391304|ref|ZP_00991635.1| threonyl-tRNA synthetase [Vibrio splendidus 12B01]
 gi|84376593|gb|EAP93471.1| threonyl-tRNA synthetase [Vibrio splendidus 12B01]
          Length = 460

 Score =  458 bits (1178), Expect = e-126,   Method: Composition-based stats.
 Identities = 220/470 (46%), Positives = 318/470 (67%), Gaps = 17/470 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  DVA SI   LAK  +A  ++G+  D  D +  + S+EIIT +
Sbjct: 4   ITLPDGSQRQFDNPVSTLDVALSIGPGLAKATIAGRVDGERVDACDLIENDASLEIITAK 63

Query: 66  DP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  A++ ++PE ++AIGP I++GFYYD D E   + ++L +I+K
Sbjct: 64  DEVDGLEIVRHSCAHLLGHAIKQLFPEAKMAIGPTIDNGFYYDIDLEHSLTQEDLEKIDK 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLC 183
           +M+E+       +K+ +S ++AR+ FE++ EAYK+EIL E++   +   LY   E+ D+C
Sbjct: 124 RMKELAKTKYQVVKKKVSWQEARDAFEARGEAYKIEILDENVSKDDRPGLYHHEEYIDMC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV   G  + F  L  VAGAYWRG+S+  ML RIYGTA++ ++ L  +L  LEE+ K
Sbjct: 184 RGPHVPHMGFCQHFTLL-NVAGAYWRGNSDNKMLQRIYGTAFHDKKALKAHLVRLEEAAK 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRK+ + +DLFH+ ++  G++FWH  GW IF+ L  ++R+K+ + DY+E+  P ++D+
Sbjct: 243 RDHRKIGKHLDLFHMQQEAPGMVFWHHNGWTIFRELEVFIRQKLTEYDYQEVKGPLMMDR 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+
Sbjct: 303 VLWERSGHWDKYAEAMFT------TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRM 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSG+LHG+MRVRGFTQDDAHVFCT++Q+  E      ++   Y  FGFE 
Sbjct: 357 AEFGSCHRNEPSGALHGIMRVRGFTQDDAHVFCTEDQVQQEVKACIEMVYDTYTTFGFEN 416

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
           I+VKLSTRPE+RVGSD +WD AE  +K  L+ ++      I   +  GEG
Sbjct: 417 IVVKLSTRPEQRVGSDEMWDRAEADLKQALEAME------IAYEIQEGEG 460


>gi|313678529|ref|YP_004056269.1| threonine--tRNA ligase [Mycoplasma bovis PG45]
 gi|312950500|gb|ADR25095.1| threonine--tRNA ligase [Mycoplasma bovis PG45]
          Length = 582

 Score =  458 bits (1177), Expect = e-126,   Method: Composition-based stats.
 Identities = 192/591 (32%), Positives = 327/591 (55%), Gaps = 33/591 (5%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQ 127
            +   + H+ +H++  AV+ ++P V++  GP  ++GFYYDFD  +P S +EL +IEK M+
Sbjct: 4   EANKPLNHTTSHLLGAAVEMLYPNVKLGFGPATDEGFYYDFDFAEPLSENELGKIEKLMK 63

Query: 128 EIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPA-KENVTLYRQGE-------W 179
           ++ +R+   +   +S ++    ++   + YK E+ + + +  + +T Y   +       +
Sbjct: 64  KLASRNL--VTIKISEDE----YDFANKPYKKELYDELKSQNKEITFYALQDPLNKEIVF 117

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLC G H+ ST  +K F KL+ +AGAYWRGDS    L+RIYGT+W T+ EL +YL  L 
Sbjct: 118 KDLCAGNHIESTKNIKNF-KLLSIAGAYWRGDSKNKQLTRIYGTSWETKDELDKYLALLS 176

Query: 240 ESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTP 297
           + ++RDHRK+ ++M +F  +     G   W   G  I   + + + +   K  + E+ TP
Sbjct: 177 DRKERDHRKIGKDMKIFTFSPLAGQGFPIWLENGMYIHNEIKNLVLKLDKKYGFTEVLTP 236

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
               + L++ SGH   Y+ +MF     ++      T   +PM CP H+ V+N    SYR+
Sbjct: 237 HFGAELLYKTSGHLAHYKDDMFKPLLVEN-----ETLIPRPMTCPHHIIVYNTEKHSYRD 291

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R +E   +YR E SG+L GL RVRG    + H+F   +Q+ +E  +++  I  I   
Sbjct: 292 LPIRYSEQSQLYRYEKSGALTGLERVRGMLLTEGHLFVRYDQIASEVKRMYKQIKEILSI 351

Query: 418 FGFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           F  E   + LS R     +K   +D++W+ AE +++  L+ +K   +       + GE A
Sbjct: 352 FNIEISYISLSLRDLNNKDKYFNNDSIWNKAEVMLEKALNDMKVKYKK------VEGEAA 405

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  +  A+G +    TIQ+DF  P +F+  Y++ ++++  P+MIHR + G+ ER
Sbjct: 406 FYGPKIDIQIDTALGHEITVSTIQLDFLQPEKFDLSYIDKNNKEVRPIMIHRGLIGTYER 465

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
           F+ I++E  KGNLP W++P QA +  +  S  ++YA+++A  L +    ++ D  +E +N
Sbjct: 466 FVAILLEQTKGNLPFWIAPKQATIIPVNLSENLKYAKKVAKKLLNSDFRVKIDDSDERLN 525

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            KIR   + K    +I G  E +  ++  R +G   T  VS+ D I +L K
Sbjct: 526 KKIRNAQVSKSKFQLILGSNEMNSNTVSYREYGKEETTTVSINDFIKLLKK 576


>gi|328774228|gb|EGF84265.1| hypothetical protein BATDEDRAFT_8061 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 581

 Score =  457 bits (1175), Expect = e-126,   Method: Composition-based stats.
 Identities = 191/594 (32%), Positives = 303/594 (51%), Gaps = 41/594 (6%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQE 128
            +V+ HS AH++  A++S + +   +  GP  + GF+YD          E  +I  K Q+
Sbjct: 1   QSVLYHSTAHLLGWALESHYGDDCLLTNGPATDQGFFYDSLL------IEGGEIRTKQQK 54

Query: 129 IIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           +  +   F    ++ + A  +F      +K+  L  IPA E V+LYR G++ DLCRGPHV
Sbjct: 55  VSTQHLAFTCIQVTRDVAARMFAYS--PFKLSYLSKIPASETVSLYRCGDFIDLCRGPHV 112

Query: 189 RSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRK 248
            +T  + K   L   A  +         LSR+ G ++++ + L ++    +E+ KRDHR 
Sbjct: 113 LNTKAINKVKLLHTGASQWQTISP--HSLSRVSGISFSSGKALREWTLQRQEASKRDHRL 170

Query: 249 LAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQ 307
           + ++  LF+ +    G  F+   G +I Q L  ++R + +   ++EI TP V ++ LW++
Sbjct: 171 IGQKQSLFYFSPLSLGAPFFLPHGTRIIQRLTDFLRHEYRKYGFDEIVTPLVFNKSLWEK 230

Query: 308 SGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGS 367
           SGHW +Y+ ++       D + D    ALKPMNCPGH  +F+   +SYR+LP+R AEF  
Sbjct: 231 SGHWKNYKEDITV-----DQLNDADIQALKPMNCPGHCLLFSSTSRSYRDLPIRYAEFSP 285

Query: 368 VYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF--GFEKIMV 425
           ++RNE SG+L GL RVR F QDD H+FCT  Q+  E       I ++Y       +  + 
Sbjct: 286 LHRNEASGALTGLTRVRKFHQDDGHIFCTPSQIAQEIQSTLKFIDTMYTKILHFPQYTLA 345

Query: 426 KLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKD 485
             +      VG+   W+ AE  +K  L              +  G+GAFYGPK +  ++D
Sbjct: 346 LSTRPESGHVGTLTQWEAAETALKEALTQFGKPW------TINHGDGAFYGPKIDIKVRD 399

Query: 486 AIGRDWQCGTIQVDFNLPSRFNAFYVN-----SHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           AIGRD Q  T+Q+DF LP +F   Y         +    PVMIHRAV GS+ER + I+ E
Sbjct: 400 AIGRDHQTATVQLDFQLPKQFQLQYSTGKTGPEDAAMETPVMIHRAVLGSVERMLAILAE 459

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLK-----------SHHLSIETDFRNE 589
           ++ G  P W+SP QAIV     +  EYAQ + N +            S +  IE D  + 
Sbjct: 460 HYGGKWPFWMSPRQAIVIPTNKTLNEYAQSVKNNIANPSELDGSNSCSAYYHIEVDDSDH 519

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            ++ ++RE  + +   I++ GDKE    ++ +R         +++     +  K
Sbjct: 520 LLSKRVREAQLLQFNYILVVGDKEQETGTVNVRSRTGKQLGLMTVDQLRALFAK 573


>gi|148377610|ref|YP_001256486.1| threonyl-tRNA synthetase [Mycoplasma agalactiae PG2]
 gi|148291656|emb|CAL59042.1| Threonyl tRNA synthetase [Mycoplasma agalactiae PG2]
          Length = 582

 Score =  457 bits (1175), Expect = e-126,   Method: Composition-based stats.
 Identities = 186/591 (31%), Positives = 321/591 (54%), Gaps = 33/591 (5%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQ 127
            +   + H+ +H++  AV++++P V++  GP  ++GFYYDFD  +P S +EL +IEK M+
Sbjct: 4   EANKQLNHTTSHLLGAAVETLYPNVKLGFGPATDEGFYYDFDFAEPLSENELGKIEKLMK 63

Query: 128 EIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPA-KENVTLYRQGE-------W 179
           ++ +R+   +K           ++   + YK E+ + + +  + +T Y   +       +
Sbjct: 64  KLASRNLVTVKID------ENQYDFANKPYKKELYDELKSQGKEITFYALQDPLNKELVF 117

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLC G H+ ST  +K F KL+ +AGAYWRGD+    L+RIYGT+W ++ EL +YL  L 
Sbjct: 118 KDLCAGNHIESTKNIKNF-KLLSIAGAYWRGDNKNRQLTRIYGTSWESKDELDKYLALLA 176

Query: 240 ESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTP 297
           + ++RDHRK+ ++M +F  +     G   W   G  I   + + + +   K  + E+ TP
Sbjct: 177 DRKERDHRKIGKDMKIFTFSPLAGQGFPIWLENGMYIHNEIRNLVLKLDKKYGFTEVLTP 236

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
               + L++ SGH   Y+ +MF     ++      T   +PM CP H+ V+N    SYR+
Sbjct: 237 HFGAELLYKTSGHLAHYKDDMFKPLLVEN-----ETLIPRPMTCPHHIIVYNTEKHSYRD 291

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R +E   +YR E SG+L GL RVRG    + H+F   +Q+ +E  +++  I  +   
Sbjct: 292 LPIRYSEQSQLYRYEKSGALTGLERVRGMLLTEGHLFVKYDQIASEVKRMYKQIKEMLSI 351

Query: 418 FGFEKIMV----KLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           F  E   +    + S   +K   +D++W+ AE +++  L  +K      +N   + GE A
Sbjct: 352 FNIEISYISLSLRDSNNKDKYFNNDSIWNKAEAMLEKALKDMK------VNYTKVEGEAA 405

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  +  A+G +    TIQ+DF  P +F+  Y++ ++++  P+MIHR + G+ ER
Sbjct: 406 FYGPKIDIQIDTALGHEITVSTIQLDFLQPEKFDLSYIDKNNKEVRPIMIHRGLIGTYER 465

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
           F+ I++E  KGNLP W++P Q  +  +     + Y +++A  L ++   ++ D  +E +N
Sbjct: 466 FVAILLEQTKGNLPFWIAPKQVTIIPVNLEENLAYVKKVAKKLLNNDFRVKIDDSDERLN 525

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            KIR   + K    +I G  E +  +I  R +G   T  VS+ D I +L K
Sbjct: 526 KKIRNAQVSKSKFQLILGSNEMNSNTISYREYGKEETTTVSINDFIKLLKK 576


>gi|66821029|ref|XP_644046.1| threonyl-tRNA synthetase [Dictyostelium discoideum AX4]
 gi|75016778|sp|Q8MP20|SYTC2_DICDI RecName: Full=Probable threonyl-tRNA synthetase 2, cytoplasmic;
           AltName: Full=Threonine--tRNA ligase; Short=ThrRS
 gi|21240667|gb|AAM44378.1| hypothetical protein [Dictyostelium discoideum]
 gi|60472212|gb|EAL70165.1| threonyl-tRNA synthetase [Dictyostelium discoideum AX4]
          Length = 698

 Score =  451 bits (1161), Expect = e-124,   Method: Composition-based stats.
 Identities = 191/682 (28%), Positives = 329/682 (48%), Gaps = 80/682 (11%)

Query: 8   TFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAING-KVCDLSDPVR----EGSIEII 62
              DG I  F    T   +A  I++++ K+++   +NG K+  + + +     + +IE +
Sbjct: 43  KLNDGRIFKFEDKQTPLTIANKINKTIGKQSILSRLNGNKLISMKEIIEMSGKDYNIEFL 102

Query: 63  TPE-DPRSLAVIRHSCAHIMAEAVQSIWPEVQ-----VAIGPIIEDG---------FYYD 107
             E    +     +S + ++A A    +         +  G ++            FY D
Sbjct: 103 NFEEHSDARICFWNSSSLVLARATMEYFKNENKEIELINFGHLVNPQTADNINQGTFYID 162

Query: 108 F---DKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES 164
               DK Q    +++ +I+K M+ I+ R+  F                  E  K +  + 
Sbjct: 163 IFFKDKNQTIKDNDINKIKKIMEYIVKRNDKF------------------EILKNDQQDQ 204

Query: 165 IPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTA 224
              +E  +  + GE+        + S+  +     +   +      +     L RI G +
Sbjct: 205 DQDQEE-SFIKFGEFKFKNNFLTIDSSNSIVSLDLIKNSSVV--GPNKEYSELQRIVGIS 261

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR 284
           + ++ ++  ++   + +  RDHR + ++ +LF       G  F+   G KI+  L+ ++R
Sbjct: 262 FPSKDQMNNWVEIQKIAALRDHRVIGKDQELFFFHPFSPGSCFFLPHGTKIYNKLLQFLR 321

Query: 285 RKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPG 343
            + +   Y+E+ +P + +Q LW+ SGHWD+Y+ NMF+ +C      D   ++LKPMNCPG
Sbjct: 322 LEYRKRGYQEVISPNIYNQKLWETSGHWDNYKDNMFSFEC------DHTQYSLKPMNCPG 375

Query: 344 HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE 403
           H  ++ H  +SY+ELP+R+A+FG ++RNE  GSL GL RVR F QDDAH+FCT + +  E
Sbjct: 376 HCLMYAHRARSYKELPMRIADFGVLHRNETHGSLSGLTRVRRFQQDDAHIFCTPDMIREE 435

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             +  + +  +Y  F F   + +LSTRP+  +G  ++W+ AE  +  VL           
Sbjct: 436 IKQCLDFMKYVYTIFNFTFHL-ELSTRPDSYLGELSVWEKAETSLSQVLTEFCGD----- 489

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN----------- 512
              +  G+GAFYGPK +  LKDA G++ QC TIQ+DF LP RFN  Y             
Sbjct: 490 KWTINHGDGAFYGPKIDIHLKDANGKNHQCATIQLDFQLPIRFNLEYSGGLNNNNNNNNN 549

Query: 513 --------SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA 564
                   +++    PVMIHRA+FGS+ER + I++E+  G  P WLSP Q IV  +++  
Sbjct: 550 NEEINDNNNNNSLNRPVMIHRALFGSVERMMAILMEHTAGKWPFWLSPRQCIVIPVSNKF 609

Query: 565 VEYAQEIANLLKSHHLSIETDFRNET-INYKIREHSIKKIPIIIICGDKEASERSIGIRR 623
            ++AQEI + +      ++ D  +   ++ KIRE ++ +   II+ G +E     + +R+
Sbjct: 610 NQFAQEIQSKINLAGYDVDVDLNDSKLLSKKIREATVSQYNYIIVVGQEEIDTNILNVRK 669

Query: 624 FG---STTTQKVSLLDAIPILT 642
                     K+SL D      
Sbjct: 670 RDLPEDNKQVKLSLNDLFSEFK 691


>gi|255019923|ref|ZP_05291997.1| Threonyl-tRNA synthetase [Acidithiobacillus caldus ATCC 51756]
 gi|254970582|gb|EET28070.1| Threonyl-tRNA synthetase [Acidithiobacillus caldus ATCC 51756]
          Length = 454

 Score =  450 bits (1158), Expect = e-124,   Method: Composition-based stats.
 Identities = 204/451 (45%), Positives = 290/451 (64%), Gaps = 13/451 (2%)

Query: 194 VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREM 253
           +   FKL++VAGAYWRGD+  PML RIYGTAW TQ+EL  YL  + E+E+RDHR++ R++
Sbjct: 1   MLGAFKLLRVAGAYWRGDARNPMLQRIYGTAWATQKELDAYLAQMAEAERRDHRRIGRDL 60

Query: 254 DLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHW 311
           DLF I ED G G++FWH +G +I + +  Y R+  ++  YE + TP +  + LW  SGH 
Sbjct: 61  DLFSIQEDAGGGLVFWHPQGAQIRKVIEDYWRQAHLRGGYELLYTPHIAHEKLWFTSGHK 120

Query: 312 DSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRN 371
           D Y  +MF          +   + LKPMNCP H+ ++ + L+SYR+LP+R AE G+VYR+
Sbjct: 121 DFYADSMFQPMED-----EGEPYQLKPMNCPFHILIYKNTLRSYRDLPIRWAELGTVYRH 175

Query: 372 EPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP 431
           E SG+LHGLMRVRGFTQDDAH+FC  +Q+  E   +  L  +I   FGF++  V LSTRP
Sbjct: 176 EMSGALHGLMRVRGFTQDDAHIFCRPDQIEAEIAGVLALTQNILGTFGFQRYEVHLSTRP 235

Query: 432 EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDW 491
           E  VGSD +W+ A   ++G L      ++  +   V  G GAFYGPK +  ++DAIGR W
Sbjct: 236 EHSVGSDEIWETATRALEGAL------ARAGLEYRVDAGGGAFYGPKIDLKIEDAIGRKW 289

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLS 551
           QC TIQ+DFNLP RF   YV+    +  P+M+HRA+FGSIERF GI+IE+++G  PLWL+
Sbjct: 290 QCSTIQLDFNLPQRFAMEYVDEDGSRRTPIMVHRAIFGSIERFFGILIEHYEGKFPLWLA 349

Query: 552 PIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
           P Q +V  I+    +YAQ + + L +  L +E+D RNE I YKIR H+++++P + + G+
Sbjct: 350 PTQVVVLPISEHQADYAQMVQSTLGAAGLRVESDLRNEKIGYKIRAHTLRRVPFLAVVGE 409

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +E +   + +R         + L D    L 
Sbjct: 410 REKAAGEVALRSRDGVDLGSLKLADVAANLK 440


>gi|330861018|emb|CBX71290.1| threonyl-tRNA synthetase [Yersinia enterocolitica W22703]
          Length = 457

 Score =  450 bits (1158), Expect = e-124,   Method: Composition-based stats.
 Identities = 217/473 (45%), Positives = 320/473 (67%), Gaps = 19/473 (4%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS + +    +  DVA  I   LAK  +A  +NG++ D SD +  +  +
Sbjct: 1   MPV---ITLPDGSQRQYDHAVSVLDVALDIGPGLAKACIAGRVNGELVDASDLIESDAQL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L ++RHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D ++  + ++L
Sbjct: 58  AIITAKDAEGLEILRHSCAHLLGHAIKQLWPDTKMAIGPVIDNGFYYDVDIDRTLTQEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M E+  +D   +K+ +S ++AR+ F ++ E YKV IL E+I   ++  LY   E
Sbjct: 118 DLLEKRMHELADKDYDVIKKKVSWQEARDTFAARGEDYKVAILDENISRDDHPGLYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV +      F KL K +GAYWRGDS   ML RIYGTAW+ +++L  YL  L
Sbjct: 178 YVDMCRGPHVPNMRFCHHF-KLQKTSGAYWRGDSKNKMLQRIYGTAWSDKKQLNAYLQRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF+ L +++R K+K+  Y+E+  P
Sbjct: 237 EEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELETFVRMKLKEYQYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW+++GHW++Y  +MF       T  + R + +KPMNCPGHV +FN GLKSYR+
Sbjct: 297 FMMDRVLWEKTGHWENYAEHMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++  +Y  
Sbjct: 351 LPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQVRDEVNSCIKMVYDMYST 410

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
           FGFEKI+VKLSTRPEKR+GSD LW  AE+ +   L      +++ I      G
Sbjct: 411 FGFEKIVVKLSTRPEKRIGSDDLWTRAEDDLAAAL------TENGIPFDYQPG 457


>gi|205356549|ref|ZP_03223312.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CG8421]
 gi|205345554|gb|EDZ32194.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CG8421]
          Length = 510

 Score =  449 bits (1155), Expect = e-124,   Method: Composition-based stats.
 Identities = 206/523 (39%), Positives = 315/523 (60%), Gaps = 20/523 (3%)

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+E+        K  ++  +A    + + +  K E+L  IP    V++Y+QGE+ DLCRG
Sbjct: 1   MKELAEAKIEISKYEITKSEALA--KFQNDDLKQEVLLRIPDGA-VSIYKQGEFEDLCRG 57

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           PHV +T  ++ FFKL +VAGAY  GD  R ML+RIYGTA+  ++ L +YL  +EE++KRD
Sbjct: 58  PHVPNTKFLR-FFKLTRVAGAYLGGDEKREMLTRIYGTAFADKESLKEYLTIIEEAKKRD 116

Query: 246 HRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQH 303
           HRKL  E+ LF   ++ G G+  W   G ++   L   + +      YE +  P++L   
Sbjct: 117 HRKLGTELKLFTFDDEIGGGLPIWLSNGARLRSKLEHMLYKIHRLRGYEPVRGPELLKAD 176

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
            W+ SGH+ +Y+ NM+  +       D + + +KPMNC GH+ ++   ++SYR+LP++  
Sbjct: 177 AWKISGHYANYKENMYFTQI------DEQEYGIKPMNCVGHIKIYQSDVRSYRDLPLKFF 230

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           E+G V+R+E SG LHGL RVR FTQDDAH+FC   Q+  + L+I   + ++ K F F   
Sbjct: 231 EYGVVHRHEKSGVLHGLFRVREFTQDDAHIFCMPSQIKEQVLEILAFVDNLMKLFDFSYE 290

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           M ++ST+PEK +G D +W+ A   +K  LD      +  +  G+  G GAFYGPK +  +
Sbjct: 291 M-EISTKPEKAIGDDEIWEIATKALKEALD------EQGLKYGIDEGGGAFYGPKIDIKI 343

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            DA+ R WQCGTIQVDFNLPSRF   Y +S +EK  PVM+HRA+ GS ERFIGI+ E+  
Sbjct: 344 TDALKRKWQCGTIQVDFNLPSRFKLEYTDSDNEKKQPVMLHRAILGSFERFIGILTEHCA 403

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           G  P +++P    +  I  + + YA+EI   L   ++  E   +NE+++ KIR    +K+
Sbjct: 404 GEFPFFIAPTAVGIVPIGEAHIAYAKEIQKELLELNIDSEVYEKNESLSKKIRIAEKQKL 463

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           P+I++ GD E ++RS+ +R   +   + +SL + I  L KE +
Sbjct: 464 PMILVLGDDEVAKRSVALRDRRAKEQKNLSLDEFI-KLVKEKM 505


>gi|326936120|ref|XP_003214106.1| PREDICTED: threonyl-tRNA synthetase, mitochondrial-like, partial
           [Meleagris gallopavo]
          Length = 550

 Score =  449 bits (1155), Expect = e-124,   Method: Composition-based stats.
 Identities = 184/586 (31%), Positives = 285/586 (48%), Gaps = 43/586 (7%)

Query: 72  VIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQIEKKMQEII 130
               S A I+  AV+  +    +      EDGF+ D    ++     EL  +E       
Sbjct: 1   AFWQSSAFILGAAVEQFY-GATICSTVATEDGFFCDAHMGDRTVQRSELPVLEDACMAFA 59

Query: 131 ARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRS 190
               PF +   + E+  ELF+    +++++ +E        T+YR G    LCRGP +  
Sbjct: 60  HSQHPFERLEATREELLELFK--HNSFQLQRIEEEVTSPMATVYRCGPLLQLCRGPLLPH 117

Query: 191 TGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLA 250
           TG +     L     A+W+G S R  L RI   A+ + QEL  +    + +  RDHR++ 
Sbjct: 118 TGLIGALRVLTSS-AAFWQGPSGRLSLQRIAAIAFPSTQELEAWQQDQDAAALRDHRRIG 176

Query: 251 REMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSG 309
           +E +LF       G  F+  +G  I+ TLI ++R + +   + E+ TP +    LW+ SG
Sbjct: 177 KEQELFFFHALSPGSCFFLPRGAHIYNTLIDFIRSEYQARGFSEVVTPNIFSPRLWELSG 236

Query: 310 HWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVY 369
           HW  Y A+MF+     +T       +LKPMNCP H  +F H  +S+RELP+RLA+FG ++
Sbjct: 237 HWQHYSAHMFSFTAGTET------LSLKPMNCPAHCLMFAHRPRSWRELPLRLADFGVLH 290

Query: 370 RNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
           RNEP GSL GL RVR F QDDAH+FC  EQ+  E     + + SIY   GF   M  L+T
Sbjct: 291 RNEPPGSLTGLTRVRRFQQDDAHIFCALEQLEAEIGACLDFVRSIYATLGFSFQMA-LAT 349

Query: 430 RPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGR 489
           RP+  +G  A WD AE  ++  L       +      +  G+GAFYGPK +  ++DA+GR
Sbjct: 350 RPDGFLGDAATWDRAEQQLEKSLQDFGEPWE------LSQGDGAFYGPKIDIRIQDALGR 403

Query: 490 DWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW 549
             QCGTIQ+DF +P RF   Y ++      PV+IHRAV GS+ER + +M E+  G     
Sbjct: 404 HHQCGTIQLDFQMPERFGLEYASAAGGTARPVLIHRAVLGSVERMVAVMAESCGGKWGT- 462

Query: 550 LSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FRNETINYKIREHSIKKIPIIII 608
                                +  +L+   +  + D     T+  KIR   +      ++
Sbjct: 463 --------------------SVHAMLRRDGVMADLDADAGATLGRKIRRAQLTHYNFQLV 502

Query: 609 CGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK--ESLPPDCQK 652
            G +E    ++ +R   +    + SL   +  L +  ++  P+ ++
Sbjct: 503 VGRREQEHGTVSVRTRDNRQLGEHSLGQVLQRLRELRDARVPNAEE 548


>gi|308189939|ref|YP_003922870.1| threonine--tRNA ligase [Mycoplasma fermentans JER]
 gi|319777220|ref|YP_004136871.1| threonyl-tRNA synthetase [Mycoplasma fermentans M64]
 gi|238809889|dbj|BAH69679.1| hypothetical protein [Mycoplasma fermentans PG18]
 gi|307624681|gb|ADN68986.1| threonine--tRNA ligase [Mycoplasma fermentans JER]
 gi|318038295|gb|ADV34494.1| Threonyl-tRNA synthetase [Mycoplasma fermentans M64]
          Length = 582

 Score =  448 bits (1151), Expect = e-123,   Method: Composition-based stats.
 Identities = 195/588 (33%), Positives = 328/588 (55%), Gaps = 33/588 (5%)

Query: 71  AVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEII 130
            ++ H+ +H++  AV+ ++PEV++  GP  E+GFYYDF+ ++P S +EL++IEK M+++ 
Sbjct: 7   KLLNHTTSHLLGAAVEKLYPEVKLGFGPATEEGFYYDFEFKEPLSVNELSKIEKLMKKLA 66

Query: 131 ARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPA-KENVTLYRQGE-------WFDL 182
           +      +  ++ +   + ++ K + YK E+ + + A  + +T Y   +       + DL
Sbjct: 67  S------RNLVTIQIPEKDYDFKNKPYKKELYDELKAQGKKITFYALQDPLNKEIIFKDL 120

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C G HV ST  +K F KL+ +AGAYWRG+S+   L+RIYGT+W+ ++EL  YL  L + +
Sbjct: 121 CAGGHVESTKVIKNF-KLLSIAGAYWRGNSDNIQLTRIYGTSWSKKEELDNYLAILADRK 179

Query: 243 KRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           +RDHRKL +EM +F +    G G   W   G  I   + + + +   K  + E+ TP   
Sbjct: 180 ERDHRKLGKEMKIFAMHPLCGQGFPIWLEDGMYIHNEIKNLVLKMDRKYGFTEVLTPHFG 239

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            + L++ SGH   Y+ +MFA    ++          +PM CP H+  +N   +SYR+LP+
Sbjct: 240 SEDLYKTSGHLAHYKDDMFAPLVIEN-----ERLIPRPMTCPHHIVCYNLEKRSYRDLPI 294

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R +E   +YR E SG+L GL RVRG    + H+F  ++Q+  E   ++ LI    K F  
Sbjct: 295 RYSEQSQLYRYEKSGALTGLERVRGMLLTEGHLFVREDQIEQEIKSMYQLIEETLKIFNI 354

Query: 421 EKIMV----KLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           +   +    +     EK    + +W+ AE ++K  LD +       +    ++GE AFYG
Sbjct: 355 DISYISLSLRDKNDKEKYFNDNKMWNSAEKMLKKALDDMG------VKYTTVVGEAAFYG 408

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK +  +  A+G +    TIQ+DF  P  F+  Y + + ++  PVMIHR + G+ ERF+ 
Sbjct: 409 PKIDIQIDTALGHEITVSTIQLDFLQPKNFDITYTDKNGKEARPVMIHRGLIGTYERFVA 468

Query: 537 IMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
           I++E  KGNLP WL+P Q  +  +  +  ++Y++ I N L + +  ++ D R+E +N KI
Sbjct: 469 ILLEQTKGNLPFWLAPKQITIIPVNLNENLDYSRNIFNRLWNCNFRVKIDDRDERLNKKI 528

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           RE  + K    +I G  E  +++I  R +G   T+ V++ + I ILTK
Sbjct: 529 REAQMSKSKYQVILGANEEKDKTISYREYGKEDTKTVTVEEFINILTK 576


>gi|75764566|ref|ZP_00744025.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|74487945|gb|EAO51702.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
          Length = 445

 Score =  447 bits (1150), Expect = e-123,   Method: Composition-based stats.
 Identities = 193/451 (42%), Positives = 304/451 (67%), Gaps = 15/451 (3%)

Query: 196 KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDL 255
           K F+L  V+GAYWRGDSN  +L RIYG A+++Q+EL +YL+F+EE+ KR+HRKL  E++L
Sbjct: 2   KAFQLTHVSGAYWRGDSNNQVLQRIYGVAFSSQKELEEYLHFVEEAAKRNHRKLGSELEL 61

Query: 256 FHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSY 314
           F  +E+  G+ F+  KG  I   L +++R  + + +Y+E+ TP +++Q +W++SGHW  Y
Sbjct: 62  FMFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQEVWERSGHWGHY 121

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
           + NM+  +       D ++FALKPMNCPGH+ +F + L SYRELP+R+ EFG V+R+E S
Sbjct: 122 KDNMYFSEV------DNKSFALKPMNCPGHMLMFKNKLHSYRELPIRMCEFGQVHRHEFS 175

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
           G+L+GL+RVR F QDDAH+F T +Q+ +E   +   I  +YK FGFE   V+LSTRPE  
Sbjct: 176 GALNGLLRVRTFCQDDAHLFVTPKQIEDEIKSVMAQIDYVYKTFGFEYE-VELSTRPEDS 234

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           +G D LW+ AE  ++ VL ++           +  G+GAFYGPK ++ +KDA+ R  QCG
Sbjct: 235 MGDDKLWEQAEAALENVLQSLNY------KYRLNEGDGAFYGPKIDFHIKDALNRSHQCG 288

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQ 554
           TIQ+DF +P +F+  Y++ +++K  PV+IHRAV GS++RF+ I+IE+F G  P W++P+Q
Sbjct: 289 TIQLDFQMPEKFDLNYIDENNDKKRPVVIHRAVLGSLDRFLAILIEHFGGAFPAWVAPVQ 348

Query: 555 AIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
             V  ++++   +Y  E+A+ L    + +E D R+E + YKIRE  ++K+P  ++ GDKE
Sbjct: 349 VKVVPVSNAVHEQYCSEVAHKLAQAGVRVEQDARDEKLGYKIREAQMQKVPYFLVIGDKE 408

Query: 614 ASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
               ++ +R++G   ++ V+L   +  + +E
Sbjct: 409 MESGAVNVRKYGEEKSEVVALDVFVARIEEE 439


>gi|284054770|ref|ZP_06384980.1| threonyl-tRNA synthetase [Arthrospira platensis str. Paraca]
          Length = 525

 Score =  446 bits (1148), Expect = e-123,   Method: Composition-based stats.
 Identities = 245/520 (47%), Positives = 324/520 (62%), Gaps = 40/520 (7%)

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
            D   L  IRH+CAHI+A AVQ ++PE +VAIGP  + GFYYDFD+++PF+ ++L +I K
Sbjct: 17  SDREKLRRIRHTCAHILAMAVQKLFPETKVAIGPTTDTGFYYDFDRKEPFTPEDLGEITK 76

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE------ 178
           +M+ II  + P +++ ++ E+ R   +   E  K+EIL+SIP  E +T Y  G       
Sbjct: 77  EMKRIIKGNLPVIREEVNREQMRGEIQQLNEPLKLEILDSIPETETMTRYFIGSPDMGRA 136

Query: 179 --------------------WFDLCRGPHVRSTGQVKK-FFKLMKVAGAYWRGDSNRPML 217
                               W+DLC GPH+ STG++      L  VAGAYWRGD   P L
Sbjct: 137 VHPEVEPSLMEPVVIPPQEFWWDLCAGPHLNSTGEINPDALALESVAGAYWRGDETLPQL 196

Query: 218 SRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIF 276
            RIYGTAW T ++L  Y    EE++KRDHRKL +E+DLF I ED G G++FWH KG ++ 
Sbjct: 197 QRIYGTAWETPEQLEYYWQQKEEAKKRDHRKLGQELDLFSIQEDAGGGLVFWHPKGSRMR 256

Query: 277 QTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFA 335
             +  Y R+  ++  YE + TP + +  LW+ SGH+D YR NMF     D    + +++ 
Sbjct: 257 LLIEDYWRQAHLQGGYELLYTPHIANLALWKTSGHYDFYRENMF-----DQIEIENQSYQ 311

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC 395
           LKPMNCP HV  +   L SYRELP+R AE G+VYR E SG LHGLMRVRGFTQDDAH+FC
Sbjct: 312 LKPMNCPFHVLTYQSHLHSYRELPIRWAELGTVYRYERSGVLHGLMRVRGFTQDDAHIFC 371

Query: 396 TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTI 455
             EQ+ +E L + NL   I  DFGF K  V LSTRP K VG+D +W  A + +   L+  
Sbjct: 372 LPEQVADEILGVLNLTEKILSDFGFSKYEVNLSTRPSKSVGNDGVWQLATDALISALNI- 430

Query: 456 KNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS 515
                   +  V  G GAFYGPK +  ++DAI R WQC TIQVDFNLP RFN  YV +  
Sbjct: 431 -----KGWDYVVDEGGGAFYGPKIDIKIQDAIARLWQCSTIQVDFNLPERFNMEYVAADG 485

Query: 516 EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQA 555
            +  P+MIHRA+FGS+ERF GI+IEN+ G+ PLWL+P+  
Sbjct: 486 SRQRPIMIHRAIFGSLERFFGILIENYAGDFPLWLAPVMV 525


>gi|9955215|pdb|1EVK|A Chain A, Crystal Structure Of A Truncated Form Of Threonyl-Trna
           Synthetase With The Ligand Threonine
 gi|9955216|pdb|1EVK|B Chain B, Crystal Structure Of A Truncated Form Of Threonyl-Trna
           Synthetase With The Ligand Threonine
 gi|9955217|pdb|1EVL|A Chain A, Crystal Structure Of A Truncated Form Of Threonyl-Trna
           Synthetase With A Threonyl Adenylate Analog
 gi|9955218|pdb|1EVL|B Chain B, Crystal Structure Of A Truncated Form Of Threonyl-Trna
           Synthetase With A Threonyl Adenylate Analog
 gi|9955219|pdb|1EVL|C Chain C, Crystal Structure Of A Truncated Form Of Threonyl-Trna
           Synthetase With A Threonyl Adenylate Analog
 gi|9955220|pdb|1EVL|D Chain D, Crystal Structure Of A Truncated Form Of Threonyl-Trna
           Synthetase With A Threonyl Adenylate Analog
 gi|12084202|pdb|1FYF|A Chain A, Crystal Structure Of A Truncated Form Of Threonyl-Trna
           Synthetase Complexed With A Seryl Adenylate Analog
 gi|12084203|pdb|1FYF|B Chain B, Crystal Structure Of A Truncated Form Of Threonyl-Trna
           Synthetase Complexed With A Seryl Adenylate Analog
 gi|20664135|pdb|1KOG|A Chain A, Crystal Structure Of E. Coli Threonyl-Trna Synthetase
           Interacting With The Essential Domain Of Its Mrna
           Operator
 gi|20664136|pdb|1KOG|B Chain B, Crystal Structure Of E. Coli Threonyl-Trna Synthetase
           Interacting With The Essential Domain Of Its Mrna
           Operator
 gi|20664137|pdb|1KOG|C Chain C, Crystal Structure Of E. Coli Threonyl-Trna Synthetase
           Interacting With The Essential Domain Of Its Mrna
           Operator
 gi|20664138|pdb|1KOG|D Chain D, Crystal Structure Of E. Coli Threonyl-Trna Synthetase
           Interacting With The Essential Domain Of Its Mrna
           Operator
 gi|20664139|pdb|1KOG|E Chain E, Crystal Structure Of E. Coli Threonyl-Trna Synthetase
           Interacting With The Essential Domain Of Its Mrna
           Operator
 gi|20664140|pdb|1KOG|F Chain F, Crystal Structure Of E. Coli Threonyl-Trna Synthetase
           Interacting With The Essential Domain Of Its Mrna
           Operator
 gi|20664141|pdb|1KOG|G Chain G, Crystal Structure Of E. Coli Threonyl-Trna Synthetase
           Interacting With The Essential Domain Of Its Mrna
           Operator
 gi|20664142|pdb|1KOG|H Chain H, Crystal Structure Of E. Coli Threonyl-Trna Synthetase
           Interacting With The Essential Domain Of Its Mrna
           Operator
          Length = 401

 Score =  446 bits (1146), Expect = e-123,   Method: Composition-based stats.
 Identities = 197/410 (48%), Positives = 279/410 (68%), Gaps = 13/410 (3%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRK+ +++DL+H+ E+  G++FWH  GW IF+ L  ++R K+K+  Y+E+  P ++D+
Sbjct: 1   RDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDR 60

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+++GHWD+Y+  MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+
Sbjct: 61  VLWEKTGHWDNYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRM 114

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AEFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT+EQ+ +E      L+  +Y  FGFEK
Sbjct: 115 AEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEK 174

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           I+VKLSTRPEKR+GSD +WD AE  +   L+      ++ I     LGEGAFYGPK E+ 
Sbjct: 175 IVVKLSTRPEKRIGSDEMWDRAEADLAVALE------ENNIPFEYQLGEGAFYGPKIEFT 228

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L D + R WQCGT+Q+DF+LPSR +A YV   +E+  PVMIHRA+ GS+ERFIGI+ E F
Sbjct: 229 LYDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEF 288

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            G  P WL+P+Q ++  IT S  EY  E+   L +  + ++ D RNE I +KIREH++++
Sbjct: 289 AGFFPTWLAPVQVVIMNITDSQSEYVNELTQKLSNAGIRVKADLRNEKIGFKIREHTLRR 348

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           +P +++CGDKE     + +R         + + + I  L +E      ++
Sbjct: 349 VPYMLVCGDKEVESGKVAVRTRRGKDLGSMDVNEVIEKLQQEIRSRSLKQ 398


>gi|15829217|ref|NP_326577.1| threonyl-tRNA synthetase [Mycoplasma pulmonis UAB CTIP]
 gi|22654134|sp|Q98PH6|SYT_MYCPU RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|14090161|emb|CAC13919.1| THREONYL-TRNA SYNTHETASE 1 (THREONINE--TRNA LIGASE) (THRRS)
           [Mycoplasma pulmonis]
          Length = 589

 Score =  445 bits (1145), Expect = e-123,   Method: Composition-based stats.
 Identities = 208/587 (35%), Positives = 322/587 (54%), Gaps = 34/587 (5%)

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIAR 132
           + H+ +H++A A+  ++P V++  GP IE+GFYYDF+ E P S  EL +IEK M+++ + 
Sbjct: 19  LNHTTSHLLAAAIVQLYPNVKLGFGPAIEEGFYYDFEFENPLSKLELLKIEKLMKKLASM 78

Query: 133 DSPFLKQYLSHEKARELFESKKEAYKVEILESIP-AKENVTLYRQGE------WFDLCRG 185
           +   +K   S+      ++   + YK E+ + +    + +T Y   +      + DLC G
Sbjct: 79  NLKMVKVDGSN------YDFTNKPYKKELYDELKQKGQEITFYSLVDTNGKEIFTDLCAG 132

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
            HV ST ++  F KL+ +AGAYWRG+SN   L+RIYG+++  + EL  YL  +E+ ++RD
Sbjct: 133 GHVESTSKINNF-KLLSLAGAYWRGNSNNIQLTRIYGSSFYKKDELENYLKVIEDRKERD 191

Query: 246 HRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLIS---YMRRKIKDDYEEINTPQVLD 301
           HRK+ + + +F  +     G   W +KG  I + +     Y+ RK    +EE+ +P   +
Sbjct: 192 HRKIGKNLGIFTFSSLSGLGFPIWLKKGMLIKRAIEKEILYLDRKY--GFEEVLSPHFGE 249

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + L+ +SGH   Y+  MF     ++          +PM CP H+ +++   +SYRELP+R
Sbjct: 250 ESLYIKSGHLAHYQETMFKSLEVEN-----EKLIPRPMTCPHHIIIYDAFPRSYRELPLR 304

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           L+E   +YR E SG+L GL RVR     + H+F  ++Q+ +E L + NLI    K F  +
Sbjct: 305 LSEQSRLYRYEKSGALTGLERVRTMDLTEGHIFIRQDQIKDEVLNMINLIQETLKIFKIK 364

Query: 422 KIMVKLSTRPEK---RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
              V LS R          D +WD AE+ +K +LD      Q++I+  V  GE AFYGPK
Sbjct: 365 IDHVALSLRDNDKEKFFDDDQMWDQAESALKEILD------QNKIDYIVEKGEAAFYGPK 418

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++ +K  +       TIQ+DF LP +FN  Y+     K  P+MIHR + G+ ERF+ I+
Sbjct: 419 IDFQVKTVLNNIITMSTIQLDFLLPRKFNISYIAPDGSKQTPLMIHRGLIGTYERFVSIL 478

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           +E  KGN P WLSP Q IV  I     EYA EI + +   + ++E D R+ETIN KIRE 
Sbjct: 479 LEQTKGNFPFWLSPSQVIVLPIAKEFKEYAFEIYSKIFKQNFNVEIDNRDETINKKIREA 538

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
            I K    II G +E   ++I IR +G   T  + L   I  +  + 
Sbjct: 539 QINKYKYQIIIGKQEMENKTIAIREYGKVQTITMDLESFIEKIKSQR 585


>gi|46204424|ref|ZP_00050025.2| COG0441: Threonyl-tRNA synthetase [Magnetospirillum magnetotacticum
           MS-1]
          Length = 394

 Score =  444 bits (1142), Expect = e-122,   Method: Composition-based stats.
 Identities = 233/387 (60%), Positives = 304/387 (78%)

Query: 266 IFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD 325
           +FWH +GW +FQ LI+YMRR++K DY E+N PQ+LD+ LW+ SGHW  YR NMFA + A 
Sbjct: 1   MFWHAQGWTVFQELIAYMRRRLKGDYAEVNAPQILDKSLWETSGHWGWYRENMFAAQSAG 60

Query: 326 DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRG 385
           +  +D R FALKPMNCPGHV +F HGLKSYR+LP+R+AEFG V+R EPSG++HGLMRVRG
Sbjct: 61  EEAEDKRWFALKPMNCPGHVQIFKHGLKSYRDLPLRMAEFGVVHRYEPSGAMHGLMRVRG 120

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
           FTQDDAH+FCT++Q+ +ECLKI++LI+S Y DFGF++I+VKLSTRPEKRVGSDALWD AE
Sbjct: 121 FTQDDAHIFCTEDQLADECLKINDLILSTYADFGFDEILVKLSTRPEKRVGSDALWDHAE 180

Query: 446 NIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSR 505
            +M  VL  I+  S  RI T V  GEGAFYGPKFEY+L+DAIGRDWQCGT QVDFNLP R
Sbjct: 181 AVMTRVLAQIEEQSGGRIKTAVNPGEGAFYGPKFEYVLRDAIGRDWQCGTTQVDFNLPER 240

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAV 565
           F A Y+++ S+K  PVM+HRA+ GS+ERF GI+IE+F G+ PLWL+P+Q +V TITS A 
Sbjct: 241 FGATYIDADSQKKPPVMVHRAICGSMERFTGILIEHFAGHFPLWLAPLQIVVATITSEAD 300

Query: 566 EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
           +YA+E+  +L+   L +E D RNE INYK+REHS+ K+P+++  G +EA ER++ +RR G
Sbjct: 301 DYAREVVRVLERAGLRVEADLRNEKINYKVREHSLAKVPVLLALGRREAEERTVSVRRLG 360

Query: 626 STTTQKVSLLDAIPILTKESLPPDCQK 652
           S  T  ++L  A+    +E+  PD ++
Sbjct: 361 SQKTTTLALDAALAAFVEEATSPDRRR 387


>gi|687792|gb|AAC43729.1| putative threonyl-tRNA synthetase; similar to E. coli threonyl-tRNA
           synthetase SwissProt Accession Number P00955
           [Haemophilus influenzae]
 gi|1587744|prf||2207242E ORF 4
          Length = 443

 Score =  444 bits (1141), Expect = e-122,   Method: Composition-based stats.
 Identities = 212/447 (47%), Positives = 305/447 (68%), Gaps = 10/447 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  +VA+ I   LAK  +A  +NG+  D    +  + ++EIIT +
Sbjct: 4   ITLPDGSQRQFDRPVSVLEVAQDIGAGLAKATIAGRVNGERRDACYVIEQDATLEIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ ++P+V++AIGP IE+GFYYD D ++  + +++  IEK+
Sbjct: 64  DEDGLEIIRHSCAHLLGHAIKQLFPDVKMAIGPTIENGFYYDVDLDRSLTQEDIDAIEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   +   +K+ ++ ++AR+ FE + E YK+ IL E+I       LY   E+ D+CR
Sbjct: 124 MLELAKTNYDVVKKRVTWQEARDTFEKRGEPYKMAILDENIERTATPALYHHLEYIDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +    + F KL KVAGAYWRGDS   ML RIYGTAW  +++L +YL  LEE+ KR
Sbjct: 184 GPHVPNMRFCQHF-KLQKVAGAYWRGDSKNKMLQRIYGTAWADKKQLAEYLTRLEEAAKR 242

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQH 303
           DHRK+ + +DL+H+ E+  G++FWH  GW IF+ L +++R K+ + DY+E+  P ++D+ 
Sbjct: 243 DHRKIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGPFMMDRV 302

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++GHW +Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+A
Sbjct: 303 LWEKTGHWQNYADLMFT------TQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           EFGS +RNEPSGSLHGLMRVRGFTQDDAH+FCT++Q+ +E      ++  IY  FGF  I
Sbjct: 357 EFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQIESEVTSCIKMVYDIYSTFGFTNI 416

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKG 450
            VKLSTRPE R+GSD +WD AE  +  
Sbjct: 417 AVKLSTRPENRIGSDEMWDRAEAGLAA 443


>gi|284052870|ref|ZP_06383080.1| threonyl-tRNA synthetase [Arthrospira platensis str. Paraca]
          Length = 508

 Score =  443 bits (1138), Expect = e-122,   Method: Composition-based stats.
 Identities = 222/506 (43%), Positives = 320/506 (63%), Gaps = 20/506 (3%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSD 117
            I +        L  IRH+ +H+MA AVQ ++P+ QV IGP IE+GFYYDFD  +PF+  
Sbjct: 15  KIHLPKTSQSDQLKRIRHTTSHVMAMAVQKLFPKAQVTIGPWIENGFYYDFDSPEPFTEQ 74

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +L  I+K+M +I+ R  P +++ +S E+A+   E+  E YK+EIL  +   E +T+Y  G
Sbjct: 75  DLKAIKKEMVKILKRKLPVIREEVSREEAQRRIETLGEPYKLEILADL--TEPITIYHLG 132

Query: 178 E-WFDLCRGPHVRSTGQVKK-FFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
           + W+DLC GPHV +TG +     +L  VAGAYWRGD  +  L RIYGTAW T ++L +Y 
Sbjct: 133 DQWWDLCAGPHVETTGDINPKAIELESVAGAYWRGDETKAQLQRIYGTAWETPEQLAEYK 192

Query: 236 YFLEESEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEE 293
              EE+ +RDHR+L +E+ LF  + + G G+  W  KG  +  TL  ++ R +++  Y+ 
Sbjct: 193 RRKEEALRRDHRRLGKELGLFIFSDQVGPGLPLWTPKGTILRTTLEDFLKREQVRRGYQP 252

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           + TP +   +L++ SGHW  YR ++F +        +   F LK MNCP HV ++   L+
Sbjct: 253 VVTPHLGRVNLFKTSGHWQKYREDLFPMMGE----SEDEGFVLKAMNCPFHVQIYKSSLR 308

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYRELP+RLAEFG+VYR E SG L GL RVRGFTQDDAH+F T EQ+ +E LK+ +LI S
Sbjct: 309 SYRELPIRLAEFGTVYRYEQSGELGGLTRVRGFTQDDAHLFVTPEQLDDEFLKVVDLIQS 368

Query: 414 IYKDF----GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL 469
           + K       F+  +       +K +GSD  W+ AEN ++  ++T+       +N    +
Sbjct: 369 VLKKLKLDQSFKARLSFRDPNSDKYIGSDQAWEKAENAIRRAVETLG------MNYFEGI 422

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG 529
           GE AFYGPK ++I++DA+ R+WQ GT+QVD+NLP RF+  YV     +  PVMIHRA FG
Sbjct: 423 GEAAFYGPKLDFIVQDALEREWQLGTVQVDYNLPERFDLEYVAEDGTRQRPVMIHRAPFG 482

Query: 530 SIERFIGIMIENFKGNLPLWLSPIQA 555
           S+ER IGI+IE + G+ PLWL+P+  
Sbjct: 483 SLERLIGILIEEYTGDFPLWLAPVMV 508


>gi|47479652|gb|AAH69346.1| TARSL2 protein [Homo sapiens]
 gi|47480952|gb|AAH69811.1| TARSL2 protein [Homo sapiens]
          Length = 466

 Score =  443 bits (1138), Expect = e-122,   Method: Composition-based stats.
 Identities = 181/466 (38%), Positives = 268/466 (57%), Gaps = 17/466 (3%)

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLC+GPHVR TG++K   K+ K +  YW G+     L RIYG ++   + +  +  F EE
Sbjct: 2   DLCKGPHVRHTGKIKTI-KIFKNSSTYWEGNPEMETLQRIYGISFPDNKMMRDWEKFQEE 60

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQV 299
           ++ RDHRK+ +E +LF   +   G  F+  +G  I+ TL  ++R +    D+ E+ +P +
Sbjct: 61  AKNRDHRKIGKEQELFFFHDLSPGSCFFLPRGAFIYNTLTDFIREEYHKRDFTEVLSPNM 120

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +  LW+ SGHW  Y  NMF  +   DT      FALKPMNCPGH  +F H  +S+RE+P
Sbjct: 121 YNSKLWEASGHWQHYSENMFTFEIEKDT------FALKPMNCPGHCLMFAHRPRSWREMP 174

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R A+FG ++RNE SG+L GL RVR F QDDAH+FCT EQ+  E       + S+Y  FG
Sbjct: 175 IRFADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCTVEQIEEEIKGCLQFLQSVYSTFG 234

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F   +  LSTRPE  +G   +W++AE  ++  L       +      +  G+GAFYGPK 
Sbjct: 235 FSFQLN-LSTRPENFLGEIEMWNEAEKQLQNSLMDFGEPWK------MNPGDGAFYGPKI 287

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIGIM 538
           +  +KDAIGR  QC TIQ+DF LP RFN  YV+    +K  PV+IHRA+ GS+ER I I+
Sbjct: 288 DIKIKDAIGRYHQCATIQLDFQLPIRFNLTYVSKDGDDKKRPVIIHRAILGSVERMIAIL 347

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FRNETINYKIRE 597
            EN+ G  P WLSP Q +V  +  +  +YA ++++         + D   + T+N KIR 
Sbjct: 348 SENYGGKWPFWLSPRQVMVIPVGPTCEKYALQVSSEFFEEGFMADVDLDHSCTLNKKIRN 407

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             + +   I++ G+KE  + ++ +R   +    ++ +  AI  L  
Sbjct: 408 AQLAQYNFILVVGEKEKIDNAVNVRTRDNKIHGEILVTSAIDKLKN 453


>gi|291533300|emb|CBL06413.1| threonyl-tRNA synthetase [Megamonas hypermegale ART12/1]
          Length = 423

 Score =  442 bits (1136), Expect = e-122,   Method: Composition-based stats.
 Identities = 191/430 (44%), Positives = 265/430 (61%), Gaps = 14/430 (3%)

Query: 216 MLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKI 275
           ML R+YGTA+  Q +L  YL  LEE+ KRDHRKL +E+DLF + E+G G  F+H  G  I
Sbjct: 1   MLQRVYGTAFEKQADLDAYLKMLEEAAKRDHRKLGKELDLFSLHEEGPGFPFFHPNGMVI 60

Query: 276 FQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
              LI+Y R    +  Y+EI TP ++++ LW+ SGHWD Y+ NM+  K       D   +
Sbjct: 61  RNELINYWREVHRQFGYQEIKTPMIMNRKLWETSGHWDHYKENMYFTKI------DGEDY 114

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           A+KPMNCPG + V+     SYR+LP+RL E G V+R+E SG+LHGLMRVR FTQDDAH+F
Sbjct: 115 AIKPMNCPGGMLVYLTQQHSYRDLPLRLGELGLVHRHELSGALHGLMRVRNFTQDDAHIF 174

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDT 454
               Q+ +E  ++ +L   +Y  FG      +LSTRPE  +GSD +W+ A N ++  L+ 
Sbjct: 175 MLPNQIEDEIQRVIDLFDKVYSTFGLTYHA-ELSTRPEDSMGSDEVWETATNALRNALEH 233

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH 514
                   +   +  G+GAFYGPK ++ L D+IGR WQCGTIQ+D  +P +F+  Y+   
Sbjct: 234 ------RGLKYVINEGDGAFYGPKIDFHLTDSIGRTWQCGTIQLDMLMPEKFDLTYIGED 287

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANL 574
            +K  PVMIHR V+GSIERFIGI+IEN+ G  P WL+P+Q  +  I+   V+YA EI   
Sbjct: 288 GQKHRPVMIHRVVYGSIERFIGILIENYAGAFPAWLAPVQVKILPISDKYVDYAYEIKRK 347

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           +    + +E D RNE I YKIRE  +KK+P  II G+ E   ++I +R+     T  +  
Sbjct: 348 MFDLGIRVEVDDRNEKIGYKIREAQVKKVPYSIIVGESELENKNISVRKRREKDTVTMDT 407

Query: 635 LDAIPILTKE 644
              I  L +E
Sbjct: 408 DTFINNLLEE 417


>gi|193216931|ref|YP_002000173.1| threonyl-tRNA synthetase [Mycoplasma arthritidis 158L3-1]
 gi|193002254|gb|ACF07469.1| threonyl-tRNA synthetase [Mycoplasma arthritidis 158L3-1]
          Length = 579

 Score =  442 bits (1136), Expect = e-121,   Method: Composition-based stats.
 Identities = 206/593 (34%), Positives = 328/593 (55%), Gaps = 34/593 (5%)

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIAR 132
           + HS +H++A A+  ++P  ++AIGP I++GFYYDF+ E+P    +L +IEK+M ++  +
Sbjct: 7   LNHSTSHLLAAAILKLYPNTKLAIGPAIDEGFYYDFEFEKPLLESDLPKIEKQMHKLAEQ 66

Query: 133 DSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-VTLY-------RQGEWFDLCR 184
                K  +      + +    + YK E+ E +   +  +T Y       ++  + DLC 
Sbjct: 67  GYVMEKVDV------QNYNFDNQPYKKEMFEELKKDKKEITFYAYIHPKTKENLFVDLCV 120

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           G HV ST ++K F KL+ +AGAYWRGDS   ML+RIYGT W +Q+EL +YL  +EE ++R
Sbjct: 121 GNHVESTKEIKHF-KLLSLAGAYWRGDSKNKMLTRIYGTCWESQKELEEYLALVEERKER 179

Query: 245 DHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           DHRK+ +++++F +++  G G   W   G KI   +  Y+ +  +   ++E+ TP   ++
Sbjct: 180 DHRKIGKDLNIFAVSQLSGQGFPIWLEDGMKIHNAIRDYVLKLDRKFGFKEVLTPHFGEK 239

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            L++ SGHWD Y+ +MF     D+      T   +PM CP H+ ++N   +SYR+LP+R 
Sbjct: 240 KLYEISGHWDHYQEDMFTPIKMDN-----ETLVARPMTCPHHIVLYNMTRRSYRDLPIRY 294

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           +E   +YR E SG+L GL RVR     + HVF  K+Q+  E   ++N+I     DF  + 
Sbjct: 295 SEQSRLYRYEKSGALSGLERVRSMDLTEGHVFVRKDQIKAEFKHLYNMIQKALSDFDIQV 354

Query: 423 IMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
             V LS R           D +W+ AE  +K VL  +K      I     +GE AFYGPK
Sbjct: 355 DHVSLSLRDPNNSVKFFNDDKMWNQAEADLKEVLKELK------IEYKEFIGEAAFYGPK 408

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++ +K  + +     T+Q+DF LP+RF   YV+   E   PV+IHR + G+ ERFI I+
Sbjct: 409 IDFQVKTVLNKIITMSTLQLDFLLPARFEMKYVDDKEEFQTPVLIHRGLIGTYERFIAIL 468

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           +E  KG LP WLSP Q  +  I     +Y Q++        ++   D R+E IN KIRE 
Sbjct: 469 LEQTKGVLPYWLSPRQVTILPIVDEVNDYCQKLYEEFIDLGINANVDLRSERINKKIREA 528

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
            + K   II+ G  E +  ++ +R +GS  T+  +  + + +L  E+L  + +
Sbjct: 529 QLLKTKFIIVIGKNEIANNTLAVRAYGSEETKTYTKEEFLTML--ENLKNNLK 579


>gi|71655606|ref|XP_816364.1| threonyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener]
 gi|70881486|gb|EAN94513.1| threonyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 817

 Score =  441 bits (1133), Expect = e-121,   Method: Composition-based stats.
 Identities = 199/760 (26%), Positives = 333/760 (43%), Gaps = 128/760 (16%)

Query: 1   MPSDIKLTFPDGSIKNFPVH-ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGS 58
           M + I +T PDG          T  D+A+ +S S A++ +   +N ++ DL+     + +
Sbjct: 60  MQAPITITLPDGKQLPATSWLTTPIDIAKRLSNSQAERVIVARVNDELWDLTRVFEGDAT 119

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSD 117
           +E++  +DP +  V  HS +H++  A++ ++   ++++GP +E+G F+Y+ D  +P S  
Sbjct: 120 LELLDWDDPEARHVFWHSSSHVLGYALERVF-HTRLSVGPALEEGGFFYEGDTGRPLSET 178

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +   IE  MQE++    P+ +  +S   A  LF   +   K+ +   +P     T+YR G
Sbjct: 179 DYKSIEIAMQELVKMKMPYQRLTVSKADALLLFGYTEFKSKI-LASKVPENGFCTVYRCG 237

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
              D CRGPH+  TG+VK F  + K + +Y+ G +   +L R+YG ++  Q  LT++   
Sbjct: 238 HLIDPCRGPHLPDTGRVKAF-AVTKNSSSYFEGKAENAVLQRVYGISFPKQTMLTEWKAL 296

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
             E+ +RDHR + R+  LF   E   G  FW   G +I+  L+ + R++ +   +EE+ +
Sbjct: 297 QAEAARRDHRNIGRQQQLFGFHEVSPGSAFWLPHGARIYNALVEFQRKQYRRRGFEEVVS 356

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +    LW  SGHWD Y  NMF +      + +     +KPMNCPGH  ++     SY+
Sbjct: 357 PNMFSSKLWMVSGHWDKYADNMFRI------VVEKEDHGMKPMNCPGHCIMYAMQQHSYK 410

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ELP+R A+FG ++RNE SG+L GL RVR F QDDAH+FC  +Q+  E       +  +Y+
Sbjct: 411 ELPIRYADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCRMDQVQEEIQGALVFLDDVYR 470

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTI--------------------- 455
             GF+  + K +TRPE ++G++ +WD AE  ++  L++                      
Sbjct: 471 TLGFKFFL-KHATRPENKLGTEEMWDQAEAYLRAALNSFCGIPEHLPDPFKEGATFTFDG 529

Query: 456 ----------------------------KNSSQDRINTGVLLGE-----GAFYGPKFEYI 482
                                       +   + +  T     E     GAFYGPK + +
Sbjct: 530 RRDSVKKLRALLKKQAANRENKDTEKKEEKDDEWKGPTHADAWEENTGDGAFYGPKIDIV 589

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYV---------NSHSEKCHPVMIHRAVFGSI-- 531
           ++DA+ R  QC T+Q+DFNLP RF   Y               K H    +    G+   
Sbjct: 590 VEDALRRRHQCATVQLDFNLPQRFGLKYTLPTSTVEGGAGAEAKEHHADPNAPKVGTDAT 649

Query: 532 ---------ERFIGIMIENFKGNLPL--WLSPIQAIVTTITSSAVEYAQEIANLLKSH-- 578
                    + F+    E     L +   L   QA    I  +     +    +L  H  
Sbjct: 650 TAEGKPEAEDEFLSSY-EKAAKELCIDRRLDANQARPVMIHRAIFGSLERCIAILCEHYG 708

Query: 579 ---------HLSIETDFRNETINY--KIREH------------------------SIKKI 603
                       I      E   Y  K+R+                          + + 
Sbjct: 709 GEWPLWLSPRQVIVIPVSAENTAYATKVRDAFYADGFHADVDSGNATLDKKIRNAEVARY 768

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             I + G  E   +++ +R   +      SL +    L +
Sbjct: 769 NFIFVVGQVEEETQTVNVRTRDNRRHGTKSLAEVQRWLRE 808


>gi|254692871|ref|NP_001157090.1| threonyl-tRNA synthetase, mitochondrial isoform 3 [Mus musculus]
          Length = 642

 Score =  440 bits (1132), Expect = e-121,   Method: Composition-based stats.
 Identities = 195/610 (31%), Positives = 308/610 (50%), Gaps = 49/610 (8%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSD 117
           +I+I  PE  +  AV  ++  + +A  +     +  VA     E      +D ++P  +D
Sbjct: 65  AIKISLPEGQKVDAVAWNTTPYQLAHQISVTLADTAVAAEVNGE-----LYDLDRPLETD 119

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
                             FL       KA          +K+ ++E        T+Y  G
Sbjct: 120 --------------CHLRFLTFDSPEGKA-------DNHFKLHLIEEKVTGPTATVYGCG 158

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
              DLCRGPH+R TGQ+    KL+  + A WR       L R+ G ++   + L  +   
Sbjct: 159 MSVDLCRGPHLRHTGQIG-ALKLLTNSSALWRSLGAPETLQRVSGISFPKVELLRNWEAR 217

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINT 296
            E +E RDHR++ +E +LF   E   G  F+  +G +++  L++++R +  +  + E+ T
Sbjct: 218 REAAELRDHRRIGKEQELFFFHELSPGSCFFLPRGTRVYNALVAFIRAEYARRGFSEVKT 277

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD-----------LRTFALKPMNCPGHV 345
           P +    LW+QSGHW+ YRA+MF++K       D             T ALKPMNCP H 
Sbjct: 278 PTLFSTKLWEQSGHWEHYRADMFSLKPPGTDGVDNSQSGHPARCPKDTLALKPMNCPAHC 337

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +F H  +S+RELPVRLA+FG+++R E SGSL GL R+  F QDDAH+FC   Q+  E  
Sbjct: 338 LMFAHRPRSWRELPVRLADFGALHRAEASGSLGGLTRLWRFQQDDAHIFCAPHQLEAEIQ 397

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
              + +  +Y   GF   +  LSTRP   +G   LWD AE +++  L+            
Sbjct: 398 GCLDFLRCVYSVLGFSFHLA-LSTRPPGFLGEPRLWDQAEQVLQQALEKFGEPWD----- 451

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
            +  G+GAFYGPK +  L DA+GR  QCGTIQ+DF LP RF+  Y         PV+IHR
Sbjct: 452 -LNPGDGAFYGPKIDVHLHDALGRPHQCGTIQLDFQLPLRFDLQYKGPAGTPECPVLIHR 510

Query: 526 AVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD 585
           AV GS+ER +G++ E+  G  PLWLSP+Q +V  + +   EYA+++   L++  L  + D
Sbjct: 511 AVLGSVERLLGVLAESCGGKWPLWLSPLQVVVIPVRTEQEEYARQVQQCLQAAGLVSDLD 570

Query: 586 -FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK- 643
                T++ ++R   +       + G +E S+R++ +R   +    +  L +++  L + 
Sbjct: 571 ADSGLTLSRRVRRAQLAHYNFQFVVGQREQSQRTVNVRTRDNRQLGERDLAESVQRLLEL 630

Query: 644 -ESLPPDCQK 652
             +  P+ ++
Sbjct: 631 QNARVPNAEE 640



 Score = 81.8 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 2/69 (2%)

Query: 5   IKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           IK++ P+G  +     + T   +A  IS +LA  AVA  +NG++ DL  P+  +  +  +
Sbjct: 66  IKISLPEGQKVDAVAWNTTPYQLAHQISVTLADTAVAAEVNGELYDLDRPLETDCHLRFL 125

Query: 63  TPEDPRSLA 71
           T + P   A
Sbjct: 126 TFDSPEGKA 134


>gi|72080917|ref|YP_287975.1| threonyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448]
 gi|71914041|gb|AAZ53952.1| threonyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448]
          Length = 579

 Score =  439 bits (1130), Expect = e-121,   Method: Composition-based stats.
 Identities = 197/584 (33%), Positives = 327/584 (55%), Gaps = 31/584 (5%)

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIAR 132
           + HS +H++A A++ ++P V+  IGP+ +DGFYYDFD     S  +  +IEK M++++++
Sbjct: 9   LNHSSSHLLALAIKILYPGVKFGIGPVFDDGFYYDFDFSVSISQSDFPKIEKLMKKLVSK 68

Query: 133 DSPFLKQYLSHEKARELFESKKEAYKVEILESI-PAKENVTLYRQGE------WFDLCRG 185
           +   +      E   +  + + + YK E+   +    E +T +   +      + DLC G
Sbjct: 69  NLKIV------ETDGKNLDFQNQTYKAELKSDLEKKGEKITYFSIVDSKNNILFEDLCYG 122

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
            H+ S G+++ F KL+K+AGAYW+GDS    L+RIYGT+W++++ L ++L  L+E ++RD
Sbjct: 123 NHLESLGKIQNF-KLLKIAGAYWKGDSKNKQLTRIYGTSWDSKENLDKFLGILQERQERD 181

Query: 246 HRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQH 303
           HRK+  ++ LF  +   G G   W   G +I+  +   +        + E+ TP    + 
Sbjct: 182 HRKIGAKLKLFTFSSYFGLGFPVWLENGMRIYNKIRQKILEFDRNYGFREVLTPHFGHKE 241

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           L++ SGH   YR +MF          +      +PM CP H+ +F+  L SYR LP R++
Sbjct: 242 LYKISGHLLHYRDDMF-----KGLKIENEELIPRPMTCPHHIILFSQQLFSYRNLPYRIS 296

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           E   +YR E SG+L GL RVR     + H+F +K Q+F+E   +  +I  +   F  +  
Sbjct: 297 EQSRLYRYEKSGALLGLERVRAMDLTEGHIFVSKSQIFSEISHLFQMISEVLDFFKVQIF 356

Query: 424 MVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
            +  S R  K        D +W+ AE  +K  LD      Q++IN    +GE AFYGPK 
Sbjct: 357 YISFSKRDPKNKDKFFQDDQMWEQAEADLKQFLD------QNKINYIEKIGEAAFYGPKI 410

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           ++ +K A+ ++    T+Q+DF LP +F   ++N H++K  P++IHR + G+ ERFI +++
Sbjct: 411 DFQVKTALNKELTISTLQLDFLLPEKFKISFINEHNKKETPILIHRGLIGTYERFIALLL 470

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E  KGNLP W+SP Q IV  +     ++AQ+I  +L     + E D R+E I+ KIRE +
Sbjct: 471 EQSKGNLPFWISPKQIIVIPVAEKHNDFAQKIHKILFDLGFNSEIDLRSERISRKIREAN 530

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           ++KI   +I GD+E ++  I  R+FGS    ++SL+D + +L  
Sbjct: 531 LEKINFQVIIGDEEIAKNEITYRKFGSPELFRISLVDFVDLLKN 574


>gi|13435498|gb|AAH04621.1| Tars protein [Mus musculus]
          Length = 457

 Score =  439 bits (1130), Expect = e-121,   Method: Composition-based stats.
 Identities = 176/458 (38%), Positives = 267/458 (58%), Gaps = 17/458 (3%)

Query: 189 RSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRK 248
           R TG++K   K+ K +  YW G ++   L RIYG ++   + L ++  F EE++ RDHRK
Sbjct: 1   RHTGKIKTL-KIHKNSSTYWEGKADMETLQRIYGISFPDPKLLKEWEKFQEEAKNRDHRK 59

Query: 249 LAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQ 307
           + R+ +L+   E   G  F+  KG  I+ TL+ ++R + +   ++E+ TP + +  LW  
Sbjct: 60  IGRDQELYFFHELSPGSCFFLPKGAYIYNTLMEFIRSEYRKRGFQEVVTPNIFNSRLWMT 119

Query: 308 SGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGS 367
           SGHW  Y  NMF+ +       +   FALKPMNCPGH  +F+H  +S+RELP+RLA+FG 
Sbjct: 120 SGHWQHYSENMFSFEV------EKEQFALKPMNCPGHCLMFDHRPRSWRELPLRLADFGV 173

Query: 368 VYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKL 427
           ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +E     + + ++Y  FGF   +  L
Sbjct: 174 LHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSVFGFSFKLN-L 232

Query: 428 STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAI 487
           STRPEK +G   +W+ AE  ++  L+      +      +  G+GAFYGPK +  +KDAI
Sbjct: 233 STRPEKFLGDIEIWNQAEKQLENSLNEFGEKWE------LNPGDGAFYGPKIDIQIKDAI 286

Query: 488 GRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIGIMIENFKGNL 546
           GR  QC TIQ+DF LP RFN  YV+    +K  PV++HRA+ GS+ER I I+ EN+ G  
Sbjct: 287 GRYHQCATIQLDFQLPIRFNLTYVSHDGDDKKRPVIVHRAILGSVERMIAILTENYGGKW 346

Query: 547 PLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPI 605
           P WLSP Q +V  +  +  EYAQ++           +TD     T+N KIR   + +   
Sbjct: 347 PFWLSPRQVMVVPVGPTCDEYAQKVRQQFHDAKFMADTDLDPGCTLNKKIRNAQLAQYNF 406

Query: 606 IIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           I++ G+KE +  ++ IR   +    + ++ + +  L +
Sbjct: 407 ILVVGEKEKASGTVNIRTRDNKVHGERTVEETVRRLQQ 444


>gi|71893938|ref|YP_279384.1| threonyl-tRNA synthetase [Mycoplasma hyopneumoniae J]
 gi|71852065|gb|AAZ44673.1| threonyl-tRNA synthetase [Mycoplasma hyopneumoniae J]
          Length = 579

 Score =  438 bits (1125), Expect = e-120,   Method: Composition-based stats.
 Identities = 196/584 (33%), Positives = 328/584 (56%), Gaps = 31/584 (5%)

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIAR 132
           + HS +H++A A++ ++P V+  IGP+ +DGFYYDFD     S  +  +IEK M++++++
Sbjct: 9   LNHSSSHLLALAIKILYPGVKFGIGPVFDDGFYYDFDLSVSISQSDFPKIEKLMKKLVSK 68

Query: 133 DSPFLKQYLSHEKARELFESKKEAYKVEILESI-PAKENVTLYRQGE------WFDLCRG 185
           +   +      E   +  + + + YK E+   +    E +T +   +      + DLC G
Sbjct: 69  NLKIV------ETDGKNLDFQNQIYKAELKNDLEKKGEKITYFSIVDSKNNILFEDLCYG 122

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
            H+ S G+++ F KL+K+AGAYW+GDS    L+RIYGT+W++++ L ++L  L+E ++RD
Sbjct: 123 NHLESLGKIQNF-KLLKIAGAYWKGDSKNKQLTRIYGTSWDSKENLDKFLGILQERQERD 181

Query: 246 HRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQH 303
           HRK+  ++ LF  +   G G   W   G +I+  +   +        ++E+ TP    + 
Sbjct: 182 HRKIGAKLKLFTFSSYFGHGFPVWLENGMRIYNKIRQKILEFDRNYGFKEVLTPHFGHKE 241

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           L++ SGH   YR +MF          +      +PM CP H+ +F+  L SYR LP R++
Sbjct: 242 LYKISGHLLHYRDDMF-----KGLKIENEELIPRPMTCPHHIILFSQQLFSYRNLPYRIS 296

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           E   +YR E SG+L GL RVR     + H+F +K Q+F+E   +  +I  +   F  +  
Sbjct: 297 EQSRLYRYEKSGALLGLERVRAMDLTEGHIFVSKSQIFSEISHLFQMISEVLDFFKVQIF 356

Query: 424 MVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
            +  S R  K        D +W+ AE  +K  LD      Q++IN    +GE AFYGPK 
Sbjct: 357 YISFSKRDPKNKDKFFQDDQMWEQAEADLKQFLD------QNKINYIEKIGEAAFYGPKI 410

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           ++ +K A+ ++    T+Q+DF LP +F   ++N +++K  P++IHR + G+ ERFI +++
Sbjct: 411 DFQVKTALNKELTISTLQLDFLLPEKFKISFINEYNKKETPILIHRGLIGTYERFIALLL 470

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E  KGNLP W+SP Q IV  +     ++AQ+I  +L     + E D R+E I+ KIRE +
Sbjct: 471 EQSKGNLPFWISPKQIIVIPVAEKHNDFAQKIHKILFDLGFNSEIDLRSERISRKIREAN 530

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           ++KI   +I GD+E ++  I  R+FGS    ++SL+D + +L  
Sbjct: 531 LEKINFQVIIGDEEITKNEITYRKFGSPELFRISLVDFVDLLKN 574


>gi|54020620|ref|YP_116116.1| threonyl-tRNA synthetase [Mycoplasma hyopneumoniae 232]
 gi|53987793|gb|AAV27994.1| threonyl-tRNA synthetase [Mycoplasma hyopneumoniae 232]
          Length = 579

 Score =  438 bits (1125), Expect = e-120,   Method: Composition-based stats.
 Identities = 197/583 (33%), Positives = 329/583 (56%), Gaps = 31/583 (5%)

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIAR 132
           + HS +H++A A++ ++P+V+  IGP+ +DGFYYDFD     S  +  +IEK M++++++
Sbjct: 9   LNHSSSHLLALAIKILYPDVKFGIGPVFDDGFYYDFDLSVSISQSDFPKIEKLMKKLVSK 68

Query: 133 DSPFLKQYLSHEKARELFESKKEAYKVEILESI-PAKENVTLYRQGE------WFDLCRG 185
           +   +      E   +  + + + YK E+   +    E +T +   +      + DLC G
Sbjct: 69  NLKIV------ETDGKNLDFQNQIYKAELKNDLEKKGEKITYFSIVDSKNNILFEDLCYG 122

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
            H+ S G+++ F KL+K+AGAYW+GDS    L+RIYGT+W++++ L ++L  L+E ++RD
Sbjct: 123 NHLESLGKIQNF-KLLKIAGAYWKGDSKNKQLTRIYGTSWDSKENLDKFLGILQERQERD 181

Query: 246 HRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQH 303
           HRK+  ++ LF  +   G G   W   G +I+  +   +        ++E+ TP    + 
Sbjct: 182 HRKIGAKLKLFTFSSYFGHGFPVWLENGMRIYNKIRQKILEFDRNYGFKEVLTPHFGHKE 241

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           L++ SGH   YR +MF          +      +PM CP H+ +F+  L SYR LP R++
Sbjct: 242 LYKISGHLLHYRDDMF-----KGLKIENEELIPRPMTCPHHIILFSQQLFSYRNLPYRIS 296

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           E   +YR E SG+L GL RVR     + H+F +K Q+F+E   +  +I  +   F  +  
Sbjct: 297 EQSRLYRYEKSGALLGLERVRAMDLTEGHIFVSKSQIFSEISHLFQMISEVLDFFKVQIF 356

Query: 424 MVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
            +  S R  K        D +WD AE  +K  L+      Q++IN    +GE AFYGPK 
Sbjct: 357 YISFSKRDPKNKDKFFQDDQMWDQAEADLKQFLE------QNKINYIEKIGEAAFYGPKI 410

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           ++ +K A+ ++    T+Q+DF LP +F   ++N H++K  P++IHR + G+ ERFI +++
Sbjct: 411 DFQVKTALNKELTISTLQLDFLLPKKFKISFINEHNKKETPILIHRGLIGTYERFIALLL 470

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E  KGNLP W+SP Q IV  +     ++AQ+I  +L     + E D R+E I+ KIRE +
Sbjct: 471 EQSKGNLPFWISPKQIIVIPVAEKHNDFAQKIHKILFDLGFNSEIDLRSERISRKIREAN 530

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           ++KI   +I GD+E ++  I  R+FGS    ++SL+D + +L 
Sbjct: 531 LEKINFQVIIGDEEITKNEITYRKFGSPELFRISLVDFVDLLK 573


>gi|269114879|ref|YP_003302642.1| threonyl-tRNA synthetase (threonine-tRNAligase, thrRS) [Mycoplasma
           hominis]
 gi|268322504|emb|CAX37239.1| Threonyl-tRNA synthetase (Threonine-tRNAligase, ThrRS) [Mycoplasma
           hominis ATCC 23114]
          Length = 579

 Score =  437 bits (1123), Expect = e-120,   Method: Composition-based stats.
 Identities = 206/590 (34%), Positives = 320/590 (54%), Gaps = 32/590 (5%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQ 127
            +   + HS +H++A A+  ++P  ++AIGP IE+GFYYDF+ E P    +L  IEK M+
Sbjct: 2   EANKKLNHSASHLLAAAILKLYPNAKLAIGPAIEEGFYYDFEFENPILESDLPNIEKVMK 61

Query: 128 EIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIP-AKENVTLY-------RQGEW 179
           E+              +   E +  + + YK E+ E      + +T +       ++  +
Sbjct: 62  ELAKEGYE------MRKVGIEQYSFENQPYKKELYEEFKKEGKEITFFQYWNPKTKEILF 115

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLC G H+ ++ ++K F KL+ +AGAYWRGDS   ML+RIYGT W T+ EL +YL  L 
Sbjct: 116 TDLCAGGHIENSREIKYF-KLLGIAGAYWRGDSKNKMLTRIYGTCWETKDELAKYLDILR 174

Query: 240 ESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           E ++RDHRK+ R+++LF   + G  G  FW   G KI   +  Y+ +  K   + E+ TP
Sbjct: 175 ERKERDHRKIGRDLNLFTFNQLGGQGFPFWLEDGMKIHNAIRDYVLKLDKKFGFREVLTP 234

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
              ++ L++ SGHW  Y+  MFA    D+      T   +PM CP H+ +FN   +SY++
Sbjct: 235 HFGEKKLYEISGHWAHYQDTMFAPIKMDN-----ETLVARPMTCPHHIILFNSTRRSYKD 289

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R +E   +YR E SG+L GL RVRG    + H+F   +Q+ +E   ++ +I+   KD
Sbjct: 290 LPIRYSEQSRLYRYEASGALSGLERVRGMDLTEGHIFVRPDQIRSEFKHLYKMILQALKD 349

Query: 418 FGFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           F  E   + LS R  +       +D +W+ AEN ++ VL       +  I     +GE A
Sbjct: 350 FNIEIDHISLSLRDPQDTQKFFQNDEMWNKAENDLREVL------GELNIKYKEFIGEAA 403

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK ++ +K A+ R     T+Q+DF LPSRF   +V+S+ +   PV+IHR + G+ ER
Sbjct: 404 FYGPKVDFQVKTALNRIITMSTLQLDFLLPSRFEMKFVDSNEQFVTPVLIHRGLIGTYER 463

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           FI  ++E  KG LP WLSP Q  +  I     E AQ++ N       ++  D R E IN 
Sbjct: 464 FIATLLEQTKGVLPFWLSPRQITIIPINDELNEKAQDLYNEFLDEDFNVNIDIRPERINK 523

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           KIR+  I K   I++ G KE    ++ +R +G   ++  S  + +  L +
Sbjct: 524 KIRDAQILKTKFIVVIGKKEIETNTLSVREYGKDDSKTYSKEEFVNYLKQ 573


>gi|309805191|ref|ZP_07699243.1| threonine--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
 gi|308165425|gb|EFO67656.1| threonine--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
          Length = 461

 Score =  436 bits (1120), Expect = e-120,   Method: Composition-based stats.
 Identities = 173/464 (37%), Positives = 267/464 (57%), Gaps = 18/464 (3%)

Query: 188 VRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHR 247
           + +TG++K F KL+ VAGAYW+G S+ PML RI+GTA+    +L   L   E+ ++RDHR
Sbjct: 1   MMNTGKLKHF-KLLSVAGAYWQGKSSNPMLQRIFGTAFFKDADLKADLQRREDIKERDHR 59

Query: 248 KLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLW 305
            + R++DLF +      G+ +W  KG  I + +  Y+  +++ D Y+ + TP +++   +
Sbjct: 60  TIGRDLDLFFVDPKVGAGLPYWMPKGATIRRVIERYIIDKEVADGYQHVYTPVLMNLDAY 119

Query: 306 QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEF 365
           + SGHW  YR +MF          D     L+PMNCP H+ ++NH ++SYRELP+R+AE 
Sbjct: 120 KTSGHWAHYREDMFPPMDMG----DGEMLELRPMNCPSHIQIYNHHIRSYRELPIRIAEL 175

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
           G ++R E SG+L GL RVR  T +D H F   +Q+ +E  KI  LI+ +Y+DF       
Sbjct: 176 GMMHRYEKSGALSGLQRVREMTLNDGHTFVELDQVQSEFAKILKLIMEVYRDFDITDYYF 235

Query: 426 KLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
           +LS R  K       +D +W+ ++ ++KG +D +       +      GE AFYGPK + 
Sbjct: 236 RLSYRDPKNTDKYFANDEMWERSQKMLKGAMDDLG------LEYVEAEGEAAFYGPKLDI 289

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
             K A+G D    TIQ+DF LP RFN  YV    E+  PVM+HR + G++ERFI  + E 
Sbjct: 290 QTKTALGNDETMSTIQLDFMLPERFNLSYVGKDGEEHRPVMVHRGIVGTMERFIAYLTEI 349

Query: 542 FKGNLPLWLSPIQAIVTTI-TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +KG  P WL+P+Q  +  +   +  EYAQ + + L       E DFRNE + YKIRE   
Sbjct: 350 YKGAFPTWLAPLQVKIIPVNNDAHGEYAQNVKDQLMKLGFRAEVDFRNEKLGYKIREAQT 409

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +K+P  ++ GD E    S+ +R++GS   +  +L + +  L+ +
Sbjct: 410 QKVPYTLVLGDDELQHNSVNVRKYGSEDQESKALSEFVSELSAD 453


>gi|254993456|ref|ZP_05275646.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL J2-064]
          Length = 445

 Score =  433 bits (1113), Expect = e-119,   Method: Composition-based stats.
 Identities = 173/450 (38%), Positives = 265/450 (58%), Gaps = 18/450 (4%)

Query: 202 KVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED 261
            VAGAYWRGDSN  ML RIYGTA+  +  L +++   +E+++RDHRKL +E+DLF  + +
Sbjct: 3   SVAGAYWRGDSNNKMLQRIYGTAFFDKNGLKEFIQMQKEAKERDHRKLGKELDLFANSIE 62

Query: 262 GS-GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMF 319
              G+  W  KG  I + +  Y+  K +   Y  + TP + +  L++ SGHWD Y  +MF
Sbjct: 63  VGQGLPLWLPKGATIRRVIERYIVDKEERLGYNHVYTPIMANVELYKTSGHWDHYHEDMF 122

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHG 379
                D+         L+PMNCP H+ ++ + + SYRELP+R+AE G ++R E SG+L G
Sbjct: 123 PTMKMDN-----EELVLRPMNCPHHMMIYKNDIHSYRELPIRIAELGMMHRYEMSGALSG 177

Query: 380 LMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK----RV 435
           L RVRG T +DAHVF   +Q+ +E  ++  LI+ +YKDF  +    +LS R  K      
Sbjct: 178 LQRVRGMTLNDAHVFVRPDQIKDEFKRVVELILEVYKDFDIKDYSFRLSYRDPKNTEKYF 237

Query: 436 GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGT 495
             DA+W+ A+ ++K  +D ++      ++     GE AFYGPK +  +K AIG++    T
Sbjct: 238 DDDAMWEKAQAMLKSAMDEME------MDYFEAEGEAAFYGPKLDVQVKTAIGKEETLST 291

Query: 496 IQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQA 555
           +Q+DF LP RF+  Y+    EK  PV+IHR V  ++ERF+  +IE +KG  P WL+P+Q 
Sbjct: 292 VQLDFLLPERFDLTYIGEDGEKHRPVVIHRGVVSTMERFVAYLIEEYKGAFPTWLAPVQM 351

Query: 556 IVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
            +  +   + ++YA+ + + L+   L  E D RNE + YKIRE   KKIP  ++ GD+E 
Sbjct: 352 ELIPVNADAHLDYAKGVQDKLQRAGLRAEVDDRNEKLGYKIREAQTKKIPYALVLGDQEV 411

Query: 615 SERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
              S+ +RR+GS  ++ + L   I  +  E
Sbjct: 412 EAGSVNVRRYGSKDSETMDLDAFIAQVVAE 441


>gi|293363452|ref|ZP_06610209.1| threonine--tRNA ligase [Mycoplasma alligatoris A21JP2]
 gi|292552972|gb|EFF41725.1| threonine--tRNA ligase [Mycoplasma alligatoris A21JP2]
          Length = 580

 Score =  431 bits (1109), Expect = e-118,   Method: Composition-based stats.
 Identities = 191/588 (32%), Positives = 320/588 (54%), Gaps = 33/588 (5%)

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIAR 132
           + H+ +H++  AV+ ++P V++  GP I +GFYYDF+  +  S  EL++IEK M+++ +R
Sbjct: 7   LNHTTSHLLGAAVEKLYPGVKLGFGPAISEGFYYDFEFLEALSDTELSKIEKFMKKLASR 66

Query: 133 DSPFLKQYLSHEKARELFESKKEAYKVEILESI-PAKENVTLY-------RQGEWFDLCR 184
           +    +   SH      +  + + YK E+ + +    + +T Y       ++  + DLC 
Sbjct: 67  NLVMQQVDQSH------YSFENKPYKKELYDELVKQGKTITFYALVDPLSKEEIFVDLCA 120

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           G H   T ++K F KL+ ++GAYWRGDSN   L+RIYGT+W+T++EL  YL  L++ ++R
Sbjct: 121 GNHTEDTKKIKNF-KLLNLSGAYWRGDSNNIQLTRIYGTSWDTKEELATYLEILKDRKER 179

Query: 245 DHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           DHRK+ +EM LF  ++  G G+  W   G  I   + + + +   K  + E+ TP   ++
Sbjct: 180 DHRKIGKEMKLFAFSKLSGQGLPIWLEDGMAIHNEIKNLVLKMDKKYGFREVLTPHFGEE 239

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            L++ SGH   Y+ +MF          +      +PM CP H+  +N   +SYR+LP+R 
Sbjct: 240 TLYKISGHLAHYKDDMFKPIVV-----EGERLIPRPMTCPHHIICYNMEKRSYRDLPIRY 294

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           +E   +YR E SG+L GL RVRG    + H+F   +Q+ +E   ++ LI         + 
Sbjct: 295 SEQSQLYRYEKSGALTGLERVRGMLLTEGHIFLRPDQIESEFKTMYALIKETLDLLKIKI 354

Query: 423 IMV----KLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
             +    +     EK    D +W+ +E  ++ VLD +    +++I      GE AFYGPK
Sbjct: 355 NYISLSLRDKEDKEKYFDDDKMWNSSEAQLRKVLDDLNIEYEEKI------GEAAFYGPK 408

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +  +  ++G +    T+Q+DF LPSRF   Y +   E+  PV++HR + G+ ERF+  +
Sbjct: 409 IDIQIFTSLGHEITISTLQLDFLLPSRFEMKYTDKDGEEKTPVLLHRGLIGTYERFVATL 468

Query: 539 IENFKGNLPLWLSPIQAIVTTITS-SAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +E  KGNLP WL+P Q  V  +   +  EYA+E+   L ++ +  + D R E ++ K+RE
Sbjct: 469 LEQTKGNLPFWLAPKQVTVIPVHEINNYEYAKEVNEFLFANDIRTKLDDREERLSKKMRE 528

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
             I K    +I GDKE   ++I  R++G  +T   SL   + +L  + 
Sbjct: 529 AQISKSKYQLILGDKEQESKTISYRKYGEDSTTTTSLEKFLEMLNNDK 576


>gi|149027311|gb|EDL82978.1| threonyl-tRNA synthetase, isoform CRA_b [Rattus norvegicus]
          Length = 433

 Score =  431 bits (1107), Expect = e-118,   Method: Composition-based stats.
 Identities = 166/430 (38%), Positives = 252/430 (58%), Gaps = 16/430 (3%)

Query: 217 LSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIF 276
           L RIYG ++   + L ++  F EE++ RDHRK+ R+ +L+   E   G  F+  KG  I+
Sbjct: 4   LQRIYGISFPDPKLLKEWEKFQEEAKNRDHRKIGRDQELYFFHELSPGSCFFLPKGAYIY 63

Query: 277 QTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFA 335
            TL+ ++R + +   ++E+ TP + +  LW  SGHW  Y  NMF+ +       +   FA
Sbjct: 64  NTLMEFIRSEYRKRGFQEVVTPNIFNSRLWMTSGHWQHYSENMFSFEV------EKEQFA 117

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC 395
           LKPMNCPGH  +F+H  +S+RELP+RLA+FG ++RNE SG+L GL RVR F QDDAH+FC
Sbjct: 118 LKPMNCPGHCLMFDHRPRSWRELPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFC 177

Query: 396 TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTI 455
             EQ+ +E     + + ++Y  FGF   +  LSTRPEK +G   +W+ AE  ++  L+  
Sbjct: 178 AMEQIEDEIKGCLDFLRTVYSVFGFSFKLN-LSTRPEKFLGDIEIWNQAEKQLENSLNEF 236

Query: 456 KNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS 515
               +      +  G+GAFYGPK +  +KDAIGR  QC TIQ+DF LP RFN  YV+   
Sbjct: 237 GEKWE------LNPGDGAFYGPKIDIQIKDAIGRYHQCATIQLDFQLPIRFNLTYVSHDG 290

Query: 516 -EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANL 574
            +K  PV++HRA+ GS+ER I I+ EN+ G  P WLSP Q +V  +  +  EYAQ++   
Sbjct: 291 DDKKRPVIVHRAILGSVERMIAILTENYGGKWPFWLSPRQVMVVPVGPTCDEYAQKVRQE 350

Query: 575 LKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
                  ++ D     T+N KIR   + +   I++ G+KE +  ++ IR   +    + +
Sbjct: 351 FHDAKFMVDIDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKASGTVNIRTRDNKVHGERT 410

Query: 634 LLDAIPILTK 643
           + + +  L +
Sbjct: 411 VGETVERLQQ 420


>gi|260901781|ref|ZP_05910176.1| threonine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
 gi|308108104|gb|EFO45644.1| threonine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
          Length = 386

 Score =  430 bits (1106), Expect = e-118,   Method: Composition-based stats.
 Identities = 186/388 (47%), Positives = 258/388 (66%), Gaps = 13/388 (3%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRA 316
           + ++  G++FWH  GW IF+ L  ++R K+ + DY+E+  P ++D+ LW++SGHWD Y  
Sbjct: 1   MQQEAPGMVFWHHNGWSIFRDLEVFVRDKLNEYDYQEVKGPLMMDRVLWERSGHWDKYAD 60

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+AEFGS +RNEPSG+
Sbjct: 61  AMFT------TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGA 114

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
           LHG+MRVRGFTQDDAH+FCT+ Q+  E      ++   Y+ FGF+ I+VKLSTRPEKRVG
Sbjct: 115 LHGIMRVRGFTQDDAHIFCTESQIQEEVTSCIKMVYDTYQTFGFDNIVVKLSTRPEKRVG 174

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
           SD +WD +E  +K  L++++      I   +  GEGAFYGPK E+ L D + R WQCGT+
Sbjct: 175 SDEIWDQSEEALKQSLESME------IPYEIQEGEGAFYGPKIEFTLYDCLDRAWQCGTV 228

Query: 497 QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI 556
           Q+DFNLP R  A YV  ++E+  PVMIHRA+ GS+ERFIGI+IE + G  P WL+P QA+
Sbjct: 229 QLDFNLPGRLGATYVGENNERLVPVMIHRAILGSLERFIGILIEEYAGFFPTWLAPEQAV 288

Query: 557 VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASE 616
           +  IT     Y QEI   L+   +  + D RNE I +KIREH++K++P +++ GD+E   
Sbjct: 289 LMNITDKQSGYVQEIVQKLQKSGIRAKADLRNEKIGFKIREHTLKRVPYMLVVGDQEMEA 348

Query: 617 RSIGIRRFGSTTTQKVSLLDAIPILTKE 644
             I +R        K  + D I  +  E
Sbjct: 349 GEIAVRTRKGKDLGKFKVDDFIAYIQDE 376


>gi|319653813|ref|ZP_08007907.1| threonyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
 gi|317394349|gb|EFV75093.1| threonyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
          Length = 399

 Score =  429 bits (1104), Expect = e-118,   Method: Composition-based stats.
 Identities = 180/407 (44%), Positives = 260/407 (63%), Gaps = 14/407 (3%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+EK +HRKL +E++LF   E+  G+ F+   G  +   L SY RRK +   Y+EI TP 
Sbjct: 2   EAEKINHRKLGQELELFTSMEEAPGMPFFLPNGMVMRNELESYWRRKHQRAGYQEIKTPI 61

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++ Q LW+QSGHW+ Y  NM+       +  D + +A+KPMNCPG + VFN   +SYREL
Sbjct: 62  MMKQELWEQSGHWNHYHENMYF------SNVDEQNYAIKPMNCPGAILVFNSKRRSYREL 115

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R AE G V+R+E SGSL+GL+RVR FTQDDAH+F   +Q+  E  KI  LI   Y  F
Sbjct: 116 PLRYAELGLVHRHELSGSLNGLLRVRSFTQDDAHLFVMADQIEAEIDKILVLIDEFYSHF 175

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+   V+LSTRPE+ +GS  +W+ AE  ++ VL          +N  +  G+GAFYGPK
Sbjct: 176 GFDY-KVELSTRPEEYMGSQEMWERAEGALESVLK------NKGVNYQINPGDGAFYGPK 228

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++ + D++GR WQCGTIQ+DF +P +FN  YV   ++   P+MIHRA+FGS+ERF+ I+
Sbjct: 229 IDFHILDSLGRSWQCGTIQLDFQMPQKFNCAYVGEDNKLHLPIMIHRAIFGSVERFMAIL 288

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE+F G+ PLWLSP+QA +  I+ S  EYA  + + L+   +  E DFR E +  KIRE 
Sbjct: 289 IEHFAGDFPLWLSPVQAKIIPISDSHAEYADYVKSQLEEAGIRAEADFRTEKMGLKIREA 348

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           + +K+P +++ GDKE  ++S+ +R+        +S+ D I     E+
Sbjct: 349 AKQKVPYMLVIGDKEMEQQSLSLRKRKEGNIGVMSIKDVIERFINET 395


>gi|294155633|ref|YP_003560017.1| threonine--tRNA ligase [Mycoplasma crocodyli MP145]
 gi|291600202|gb|ADE19698.1| threonine--tRNA ligase [Mycoplasma crocodyli MP145]
          Length = 580

 Score =  429 bits (1104), Expect = e-118,   Method: Composition-based stats.
 Identities = 187/589 (31%), Positives = 324/589 (55%), Gaps = 33/589 (5%)

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIAR 132
           + H+ +H++  AV+ ++P V++  GP I++GFYYDF+  +  S  EL++IEK+M++  +R
Sbjct: 7   LNHTTSHLLGAAVEKLYPNVKLGFGPAIDEGFYYDFEFTEALSDTELSKIEKQMKKFASR 66

Query: 133 DSPFLKQYLSHEKARELFESKKEAYKVEILES-IPAKENVTLYRQGE-------WFDLCR 184
           +    K   SH      ++ K + YK E+ +  I AK++VT Y   +       + DLC 
Sbjct: 67  NLVMKKVDKSH------YDFKNKPYKKELYDELIKAKKDVTFYALVDPLNNEEIFVDLCA 120

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           G H+  T ++K F KL+ ++GAYWRG+S+   L+RIYGT+W +++EL QYL  LE+ ++R
Sbjct: 121 GNHIEDTKKIKNF-KLLNLSGAYWRGNSDNIQLTRIYGTSWYSKEELDQYLAILEDRKER 179

Query: 245 DHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLIS-YMRRKIKDDYEEINTPQVLDQ 302
           DHRK+ +EM LF  ++    G   W   G  I   +    ++   K  + E+ TP   ++
Sbjct: 180 DHRKIGKEMKLFTFSKLAGQGFPIWLEDGMAIHNEVKKLILKMDRKYGFREVLTPHFGEE 239

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            L++ SGH   Y+ +MF          +      +PM CP H+  +    +SYR+LP+R 
Sbjct: 240 TLYKISGHLAHYKDDMFKPLEV-----EGEKLYPRPMTCPHHIICYKTEKRSYRDLPIRY 294

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           +E   +YR E SG+L GL RVRG    + H+F   +Q+ NE   +++LI         + 
Sbjct: 295 SEQSQLYRYEKSGALTGLERVRGMLLTEGHIFLRPDQIENEFKTMYSLIKETLDLLKIKI 354

Query: 423 IMV----KLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
             +    +     EK    D +W+++E  ++ VL+ +    ++++      GE AFYGPK
Sbjct: 355 NYISLSLRDKNDKEKYFDDDKMWNNSEEQLRKVLNDLNVQYEEKV------GEAAFYGPK 408

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +  +  ++G +    T+Q+DF LP+RF   Y +    +  PV++HR + G+ ERF+  +
Sbjct: 409 IDIQIFTSLGHEITISTLQLDFLLPTRFEMKYTDKDGNEKTPVLLHRGLIGTYERFVATL 468

Query: 539 IENFKGNLPLWLSPIQAIVTTITS-SAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +E  KG LP WL+P Q  +  +   + + Y++EI N L  H   +  D R E ++ K+RE
Sbjct: 469 LEQTKGVLPFWLAPKQVTIIPVHEINNLTYSKEIYNTLFDHDFRVSLDDREERLSKKMRE 528

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
             I K    +I GD+E + ++I  R++G  +T   ++ + I ++ ++ +
Sbjct: 529 AQISKSKYQLILGDEEQNNKTISYRKYGENSTTTTTIDEFIKMINEDRM 577


>gi|240047776|ref|YP_002961164.1| threonyl-tRNA synthetase [Mycoplasma conjunctivae HRC/581]
 gi|239985348|emb|CAT05361.1| Threonyl-tRNA synthetase [Mycoplasma conjunctivae]
          Length = 578

 Score =  429 bits (1103), Expect = e-118,   Method: Composition-based stats.
 Identities = 201/587 (34%), Positives = 327/587 (55%), Gaps = 31/587 (5%)

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIAR 132
           + HS +H++A A+++++P+V++  GP  ++GFYYDF+   P S+ +L +IEK M+++++ 
Sbjct: 10  LNHSTSHLLALAIKTLYPDVKLGFGPSTKEGFYYDFEFSTPISNLDLPKIEKLMKKLVSS 69

Query: 133 DSPFLKQYLSHEKARELFESKKEAYKVEILESIPA-KENVTLYRQGE------WFDLCRG 185
           +   L+         +  +   + YK E+LE   +  +N+T Y   +      + DLC G
Sbjct: 70  NLQILQTDG------KNIDFSTQIYKKELLEEFESQNKNITFYSIVDAKNNILFEDLCVG 123

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
            HV     +K F KL+ +AGAYWRGDS    L+RIYGT+W+TQ+EL  +L  LEE ++RD
Sbjct: 124 GHVGEIKNIKHF-KLLNIAGAYWRGDSKNIQLTRIYGTSWHTQEELNSFLALLEERKERD 182

Query: 246 HRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQH 303
           HRK+ +E+ +F   +  G G   W   G KI   +   +     +  + E+ TP   ++H
Sbjct: 183 HRKIGKELKIFTFTKWFGLGFPVWLENGMKIHNKIKDKILAFDKRYGFREVLTPHFGEKH 242

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           L++ SGH   YR +MF     +    +      +PM CP H+ +F+    SYR+LP R++
Sbjct: 243 LYETSGHLAHYRDDMF-----EPIKAESDYLIPRPMTCPHHIVLFDKAQCSYRQLPYRIS 297

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF----G 419
           E   +YR E SG+L GL RVR     + H+F +++Q+F+EC  +  +I  +   F     
Sbjct: 298 EQSRLYRFEKSGALTGLERVRSMDLTEGHIFVSRKQIFDECKHLFTMIEEVLDFFEIKID 357

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           +     +      K    + +W+DAEN +K  LD+      ++I      GE AFYGPK 
Sbjct: 358 YISFSRRDPEDKSKFYDDEQMWNDAENDLKKFLDSHNVKYVEKI------GEAAFYGPKI 411

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           ++ +K A+ ++    T+Q+DF LP +FN ++ N ++EK  PV+IHR + G+ ERFI I++
Sbjct: 412 DFQIKTALNKEITISTLQLDFLLPKKFNIYFNNENNEKETPVLIHRGLIGTYERFISILL 471

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E  KG LP WLSP Q  V  I     +YA+ + + L  ++  +E D R+E I  KIRE  
Sbjct: 472 EQTKGVLPFWLSPKQVSVIPILPKHDDYAEFVRSELAKNNFEVEVDTRDERITKKIREAQ 531

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           I+K+   +I GD E   + I  R +G   +   SL + I +L  +++
Sbjct: 532 IQKVKYQLIIGDSEVENQKITYREYGKQESTTTSLDEFIKLLNSQNV 578


>gi|62320472|dbj|BAD94986.1| putative protein [Arabidopsis thaliana]
          Length = 426

 Score =  428 bits (1100), Expect = e-117,   Method: Composition-based stats.
 Identities = 182/429 (42%), Positives = 269/429 (62%), Gaps = 14/429 (3%)

Query: 216 MLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWK 274
           ML RIYGTAW ++++L  YL+F EE+++RDHR++ +++DLF I ++ G G++FWH KG  
Sbjct: 1   MLQRIYGTAWESEEQLKAYLHFKEEAKRRDHRRIGQDLDLFSIQDEAGGGLVFWHPKGAI 60

Query: 275 IFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           +   +    ++  ++  Y+ I TP V    LW+ SGH D YR NM+     +D +     
Sbjct: 61  VRNIIEESWKKMHVEHGYDLIYTPHVAKADLWKISGHLDFYRENMYDQMEIEDEL----- 115

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
           + L+PMNCP H+ ++    +SYR+LP+R+AE G+VYR E SGSLHGL RVRGFTQDDAH+
Sbjct: 116 YQLRPMNCPYHILLYQRKRQSYRDLPIRVAELGTVYRYELSGSLHGLFRVRGFTQDDAHI 175

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
           FC ++Q+ +E   + +L   I   FGF K  V LSTRPEK VG D +W+ A   ++  LD
Sbjct: 176 FCLEDQIKDEIRGVLDLTEEILSRFGFNKYEVNLSTRPEKSVGGDDIWEKATCALRDALD 235

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS 513
               S        V  G GAFYGPK +  ++DA+GR WQC TIQVDFNLP RF+  YV++
Sbjct: 236 DRGWS------YEVDEGGGAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDITYVDT 289

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIAN 573
           +S+K  P+MIHRAV GS+ERF G++IE++ G+ PLWLSP+Q  V  +T + +E+ +E++ 
Sbjct: 290 NSDKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPVQVRVLPVTDNQLEFCKEVSK 349

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            L++  +  E     E +   IR    +KIP++ + G KE    ++ +R         + 
Sbjct: 350 KLRACGVRAEL-CHGERLPKLIRNAETQKIPLMAVVGPKEVETGTVTVRSRFGGELGTIP 408

Query: 634 LLDAIPILT 642
           + D I  + 
Sbjct: 409 VDDLINKIN 417


>gi|149001905|ref|ZP_01826859.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
 gi|147759714|gb|EDK66704.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
          Length = 435

 Score =  428 bits (1099), Expect = e-117,   Method: Composition-based stats.
 Identities = 168/436 (38%), Positives = 255/436 (58%), Gaps = 17/436 (3%)

Query: 216 MLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWK 274
           M+ RIYGTAW  +++L  YL   EE+++RDHRKL +E+DLF I+++   G+ FW   G  
Sbjct: 1   MMQRIYGTAWFEKKDLKNYLQMREEAKERDHRKLGKELDLFMISQEVGQGLPFWLPNGAT 60

Query: 275 IFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           I + L  Y+  +++   Y+ + TP +    L++ SGHWD Y+ +MF          D   
Sbjct: 61  IRRELERYIVNKELASGYQHVYTPPLASVELYKTSGHWDHYQEDMFPTMDMG----DGEE 116

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
           F L+PMNCP H+ VF H + SYRELP+R+AE G ++R E SG+L GL RVR  + +D H+
Sbjct: 117 FVLRPMNCPHHIQVFKHHVHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHL 176

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP----EKRVGSDALWDDAENIMK 449
           F T EQ+  E  +   LII +Y+DF       +LS R      K   +D +W++A+ +++
Sbjct: 177 FVTPEQIQEEFQRALQLIIDVYEDFNLTDYRFRLSLRDPQDTHKYFDNDEMWENAQTMLR 236

Query: 450 GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAF 509
             LD +       ++     GE AFYGPK +  +K A+G++    TIQ+DF LP RF+  
Sbjct: 237 AALDEMG------VDYFEAEGEAAFYGPKLDIQIKTALGKEETLSTIQLDFLLPERFDLK 290

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYA 568
           Y+ +  E   PVMIHR V  ++ERF  I+IEN+KG  P WL+P Q  +  ++    V+YA
Sbjct: 291 YIGADGEDHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYA 350

Query: 569 QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
            E+A  L+   +  + D RNE + +KIR     KIP  +I GDKE  + ++ +RR+G   
Sbjct: 351 WEVAKKLRDRGVRADVDERNEKMQFKIRASQTSKIPYQLIVGDKEMEDETVNVRRYGQKE 410

Query: 629 TQKVSLLDAIPILTKE 644
           TQ VS+ + +  +  +
Sbjct: 411 TQTVSVDNFVQAILAD 426


>gi|293396370|ref|ZP_06640648.1| threonine-tRNA ligase [Serratia odorifera DSM 4582]
 gi|291421159|gb|EFE94410.1| threonine-tRNA ligase [Serratia odorifera DSM 4582]
          Length = 387

 Score =  428 bits (1099), Expect = e-117,   Method: Composition-based stats.
 Identities = 179/388 (46%), Positives = 260/388 (67%), Gaps = 13/388 (3%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRA 316
           + E+  G++FWH  GW IF+ L +++R K+K+  Y+E+  P ++D+ LW+++GHW++Y+ 
Sbjct: 1   MQEEAPGMVFWHNDGWTIFRELEAFVRMKLKEYQYQEVKGPFMMDRVLWEKTGHWENYKD 60

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            MF       T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+ EFGS +RNEPSGS
Sbjct: 61  AMFT------TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMGEFGSCHRNEPSGS 114

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
           LHGLMRVRGFTQDDAH+FCT++Q+  E  +   ++  +Y  FGFEKI VKLSTRPEKR+G
Sbjct: 115 LHGLMRVRGFTQDDAHIFCTEDQVRAEVNECIRMVYDVYGTFGFEKIAVKLSTRPEKRIG 174

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
           +D +W  AE  +   L      +++ I      GEGAFYGPK E+ L D + R WQCGT+
Sbjct: 175 TDDMWTRAEEDLAAAL------TENGIPFEYQPGEGAFYGPKIEFTLHDCLDRAWQCGTV 228

Query: 497 QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI 556
           Q+DF LP R  A YV  ++E+  PVMIHRA+ GS+ERFIGI+ E + G  P W++P+Q +
Sbjct: 229 QLDFFLPGRLGASYVGENNERVVPVMIHRAILGSMERFIGILTEEYAGFYPTWIAPVQVV 288

Query: 557 VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASE 616
           V  IT S  +Y Q++   L+   + ++ D RNE I +KIREH+++++P +++CGDKE   
Sbjct: 289 VMNITDSQSDYVQQLTKKLQDAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVEA 348

Query: 617 RSIGIRRFGSTTTQKVSLLDAIPILTKE 644
             + +R         + + + +  L KE
Sbjct: 349 GKVAVRTRRGKDLGSLDVNEVVDKLQKE 376


>gi|90410628|ref|ZP_01218644.1| threonyl-tRNA synthetase [Photobacterium profundum 3TCK]
 gi|90328869|gb|EAS45153.1| threonyl-tRNA synthetase [Photobacterium profundum 3TCK]
          Length = 426

 Score =  427 bits (1097), Expect = e-117,   Method: Composition-based stats.
 Identities = 197/425 (46%), Positives = 287/425 (67%), Gaps = 13/425 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS + F    +  DVA  I   LAK  +A  +NG+  D  D +  + S+
Sbjct: 1   MPV---ITLPDGSQRQFDNAVSTMDVAADIGPGLAKACIAGRVNGERVDACDLIENDASL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L +IRHSCAH++  A++ ++PE ++AIGP I++GFYYD D EQ  + D++
Sbjct: 58  AIITAKDDDGLEIIRHSCAHLLGHAIKQLYPEAKMAIGPTIDNGFYYDIDLEQSLTQDDV 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             IEK+M+E++      +K+ +S ++AR+ FE++ E YK+EIL E++   +   LY   E
Sbjct: 118 DAIEKRMKELVKTKYAVVKKKVSWQEARDAFEARGETYKIEILDENVSRDDRPGLYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV + G  + F KL+ VAGAYWRG+S+  ML RIYGTA+  ++ L  +L  L
Sbjct: 178 YIDMCRGPHVPNMGFCQHF-KLLSVAGAYWRGNSDNKMLQRIYGTAFQDKKLLKAHLTRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+ KRDHRK+ + +DLFH+ ++  G++FWH  GW IF+ L  ++R K+ + +Y+E+  P
Sbjct: 237 EEASKRDHRKIGKHLDLFHMQQEAPGMVFWHHNGWTIFRELEVFIREKLTEYEYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++D+ LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+
Sbjct: 297 LMMDRVLWERSGHWDKYAEAMFT------TSSENREYAIKPMNCPGHVQIFNQGLKSYRD 350

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AEFG+ +RNEPSG+LHG+MRVRGFTQDDAHVFCT+ Q+  E      ++   Y+ 
Sbjct: 351 LPLRMAEFGACHRNEPSGALHGIMRVRGFTQDDAHVFCTENQVQQEVTSCIKMVYDTYQT 410

Query: 418 FGFEK 422
           FGF+ 
Sbjct: 411 FGFDN 415


>gi|114559279|ref|XP_001168807.1| PREDICTED: threonyl-tRNA synthetase-like 1 isoform 4 [Pan
           troglodytes]
          Length = 657

 Score =  426 bits (1095), Expect = e-117,   Method: Composition-based stats.
 Identities = 199/605 (32%), Positives = 308/605 (50%), Gaps = 45/605 (7%)

Query: 71  AVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQP-FSSDELAQIEKKMQEI 129
           AV  ++  + +A  + S   +  VA     E      +D E+P  +  +L          
Sbjct: 73  AVAWNTTPYQLARQISSTLADTAVAAQVNGEP-----YDLERPLETDSDL--------RF 119

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN-------VTLYRQGEWFDL 182
           +  DSP  K    H     L  + ++     +L   P+ E        +   R G   DL
Sbjct: 120 LTFDSPEGKAVFWHSSTHVLGAAAEQFLGA-VLCRGPSTEYGFYHDFFLGKERCGTLVDL 178

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C+GPH+R TGQ+     L   +  +    +    L R+ G ++ T + L  +  + EE+E
Sbjct: 179 CQGPHLRHTGQIGGLKLLSNSSSLWRSSGAPET-LQRVSGISFPTTELLRAWEAWREEAE 237

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLD 301
            RDHR++ +E +LF   E   G  F+  +G +++  L++++R +     + E+ TP +  
Sbjct: 238 LRDHRRIGKEQELFFFHELSPGSCFFLPRGTRVYNALVAFIRAEYAHRGFSEVKTPTLFS 297

Query: 302 QHLWQQSGHWDSYRANMFAVKCA----------DDTIKDLRT-FALKPMNCPGHVAVFNH 350
             LW+QSGHW+ Y+ +MFAV+            DD+ + +    ALKPMNCP H  +F H
Sbjct: 298 TKLWEQSGHWEHYQEDMFAVQPPGSDRPPSSQSDDSTRHITDTLALKPMNCPAHCLMFAH 357

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
             +S+RELP+RLA+FG+++R E SG L GL R+R F QDDAH+FCT +Q+  E     + 
Sbjct: 358 RPRSWRELPLRLADFGALHRAEASGGLGGLTRLRCFQQDDAHIFCTTDQLEAEIQSCLDF 417

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
           + S+Y   GF   +  LSTRP   +G   LWD AE ++K  L              +  G
Sbjct: 418 LRSVYAVLGFSFRLA-LSTRPSGFLGDPCLWDQAEQVLKQALKEFGEPWD------LNSG 470

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           +GAFYGPK +  L DA+GR  QCGTIQ+DF LP RF+  Y         PV+IHRAV GS
Sbjct: 471 DGAFYGPKIDVHLHDALGRPHQCGTIQLDFQLPLRFDLQYKGQAGALERPVLIHRAVLGS 530

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FRNE 589
           +ER +G++ E+  G  PLWLSP Q +V  + S   EYA+E    L++  L  + D     
Sbjct: 531 VERLLGVLAESCGGKWPLWLSPFQVVVIPVGSEQEEYAKEAQQSLRAAGLVSDLDADSGL 590

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK--ESLP 647
           T++ +IR   +       + G KE S+R++ IR   +    +  L +A+  L +   +  
Sbjct: 591 TLSRRIRRAQLAHYNFQFVVGQKEQSKRTVNIRTRDNRRLGEWDLPEAVQRLVELQNTRV 650

Query: 648 PDCQK 652
           P+ ++
Sbjct: 651 PNAEE 655



 Score =  120 bits (300), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 36/109 (33%), Positives = 54/109 (49%), Gaps = 3/109 (2%)

Query: 2   PSDIKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           P  IK++ P G  I     + T   +A  IS +LA  AVA  +NG+  DL  P+  +  +
Sbjct: 58  PRTIKISLPGGQKIDAVAWNTTPYQLARQISSTLADTAVAAQVNGEPYDLERPLETDSDL 117

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF 108
             +T + P   AV  HS  H++  A +  +    +  GP  E GFY+DF
Sbjct: 118 RFLTFDSPEGKAVFWHSSTHVLGAAAEQ-FLGAVLCRGPSTEYGFYHDF 165


>gi|326674558|ref|XP_002664809.2| PREDICTED: threonyl-tRNA synthetase, cytoplasmic-like, partial
           [Danio rerio]
          Length = 441

 Score =  425 bits (1093), Expect = e-116,   Method: Composition-based stats.
 Identities = 166/435 (38%), Positives = 249/435 (57%), Gaps = 15/435 (3%)

Query: 211 DSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHR 270
            S    + R+ G ++ +++E  Q+    EE+ +RDHR++ +  +LF   +   G  F+  
Sbjct: 9   SSEASGILRMIGVSFPSEREREQWEKEQEEARRRDHRRIGKAQELFFFHDVSPGSCFFMP 68

Query: 271 KGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
           KG  I+ TL  +++ + +   + E+ TP +    LW++SGHW  Y  NMF+V     T  
Sbjct: 69  KGAHIYNTLTDFIKSEYRRRGFSEVVTPTLFSTALWERSGHWQHYSENMFSVSSETHT-- 126

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
               FALKPMNCP H  +F   L+S+RE+P+R A+FG+++RNE SG+L GL RVR F QD
Sbjct: 127 ----FALKPMNCPAHCVMFEQRLRSWREMPIRWADFGALHRNEASGTLGGLTRVRRFCQD 182

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMK 449
           DAH+FCT EQ+  E     + + S+Y+ FGF      LSTRP   +G  ALWD AE  ++
Sbjct: 183 DAHIFCTPEQLEQEITACLDFVRSVYRVFGF-SFHCLLSTRPASSMGDSALWDCAEQQLE 241

Query: 450 GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAF 509
             L   +   +      +  G+GAFYGPK + +++DA+GR  QC TIQ+DF LP RFN  
Sbjct: 242 SSLKLFQERWE------LNPGDGAFYGPKIDILIRDALGRQHQCATIQLDFQLPIRFNLQ 295

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQ 569
           YV +  +   P+MIHRAV GS+ER I I+ ENF G  P WLSP Q +V  +  S+  YAQ
Sbjct: 296 YVGADGQMKRPIMIHRAVLGSLERMIAILAENFGGKWPFWLSPAQVMVVPVGGSSEAYAQ 355

Query: 570 EIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
           ++ + L+      + D     T+N KIR   + +   I + G+KE+   ++ +R      
Sbjct: 356 QVVSRLREAGFMADIDDDHGNTLNKKIRSAQLAQYNYIFVVGEKESECGTVSVRTRAGQQ 415

Query: 629 TQKVSLLDAIPILTK 643
             + +L D +  LT+
Sbjct: 416 IGQKTLEDVMKTLTQ 430


>gi|295099750|emb|CBK88839.1| threonyl-tRNA synthetase [Eubacterium cylindroides T2-87]
          Length = 391

 Score =  424 bits (1089), Expect = e-116,   Method: Composition-based stats.
 Identities = 156/394 (39%), Positives = 229/394 (58%), Gaps = 14/394 (3%)

Query: 253 MDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHW 311
           M LF ++E   G+  +   G  +   L  +   +  K  Y+ I TP ++ + LW+ SGHW
Sbjct: 1   MGLFTVSEYAPGMPIFLPNGMILRNILEQFWYEEHTKAGYQFIKTPIMMSKELWETSGHW 60

Query: 312 DSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRN 371
           + Y+ NM+          D R FA+KPMNCPG + V+N  L SY+ELP R+ E G V+R+
Sbjct: 61  EHYKENMYTTMV------DDREFAIKPMNCPGALLVYNSSLHSYKELPYRIGELGQVHRH 114

Query: 372 EPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP 431
           E SG+L+GL RVR FTQDDAH+F T +Q+ +E   +  LI  IY  FG    +   +   
Sbjct: 115 EASGALNGLFRVRTFTQDDAHLFVTPDQIESEVKNVLGLIDRIYSVFGLPYDIELSTRPE 174

Query: 432 EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDW 491
              +GS+ +W  +E  +                  V  G+GAFYGPK +  +KD++GR W
Sbjct: 175 SGYIGSEEIWQKSEEALANACIHAGK------EYKVNPGDGAFYGPKLDIHIKDSLGRVW 228

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLS 551
           QCGTIQ+D NLP RF   YV+    K  PVM+HR ++GSIERFIGI+IE+F G+ PLWL+
Sbjct: 229 QCGTIQLDMNLPERFGCTYVDKDGSKKTPVMLHRVIYGSIERFIGILIEHFAGHFPLWLA 288

Query: 552 PIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           P Q +V  +     +EYAQ++   L+   + +E D RNE + Y++RE  + K+P  I+ G
Sbjct: 289 PRQFVVIPVHQEKHLEYAQKVVKALQDAGMRVELDDRNEKLGYRVREAQMSKVPYQIVVG 348

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           D EA   ++ IR+ G   ++ ++L +A+    KE
Sbjct: 349 DGEAENETVTIRQSGKKESKTMALNEALEKFVKE 382


>gi|50959620|gb|AAH74887.1| TARSL2 protein [Homo sapiens]
          Length = 441

 Score =  424 bits (1089), Expect = e-116,   Method: Composition-based stats.
 Identities = 168/441 (38%), Positives = 250/441 (56%), Gaps = 16/441 (3%)

Query: 206 AYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGV 265
            YW G+     L RIYG ++   + +  +  F EE++ RDHRK+ +E +LF   +   G 
Sbjct: 1   TYWEGNPEMETLQRIYGISFPDNKMMRDWEKFQEEAKNRDHRKIGKEQELFFFHDLSPGS 60

Query: 266 IFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCA 324
            F+  +G  I+ TL  ++R +    D+ E+ +P + +  LW+ SGHW  Y  NMF  +  
Sbjct: 61  CFFLPRGAFIYNTLTDFIREEYHKRDFTEVLSPNMYNSKLWEASGHWQHYSENMFTFEIE 120

Query: 325 DDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVR 384
            DT      FALKPMNCPGH  +F H  +S+RE+P+R A+FG ++RNE SG+L GL RVR
Sbjct: 121 KDT------FALKPMNCPGHCLMFAHRPRSWREMPIRFADFGVLHRNELSGTLSGLTRVR 174

Query: 385 GFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
            F QDDAH+FCT EQ+  E       + S+Y  FGF   +  LSTRPE  +G   +W++A
Sbjct: 175 RFQQDDAHIFCTVEQIEEEIKGCLQFLQSVYSTFGFSFQLN-LSTRPENFLGEIEMWNEA 233

Query: 445 ENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPS 504
           E  ++  L       +      +  G+GAFYGPK +  +KDAIGR  QC TIQ+DF LP 
Sbjct: 234 EKQLQNSLMDFGEPWK------MNPGDGAFYGPKIDIKIKDAIGRYHQCATIQLDFQLPI 287

Query: 505 RFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSS 563
           RFN  YV+    +K  PV+IHRA+ GS+ER I I+ EN+ G  P WLSP Q +V  +  +
Sbjct: 288 RFNLTYVSKDGDDKKRPVIIHRAILGSVERMIAILSENYGGKWPFWLSPRQVMVIPVGPT 347

Query: 564 AVEYAQEIANLLKSHHLSIETD-FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
             +YA ++++         + D   + T+N KIR   + +   I++ G+KE  + ++ +R
Sbjct: 348 CEKYALQVSSEFFEEGFMADVDLDHSCTLNKKIRNAQLAQYNFILVVGEKEKIDNAVNVR 407

Query: 623 RFGSTTTQKVSLLDAIPILTK 643
              +    ++ +  AI  L  
Sbjct: 408 TRDNKIHGEILVTSAIDKLKN 428


>gi|153870648|ref|ZP_02000004.1| threonyl-tRNA synthetase, class IIa [Beggiatoa sp. PS]
 gi|152072888|gb|EDN69998.1| threonyl-tRNA synthetase, class IIa [Beggiatoa sp. PS]
          Length = 390

 Score =  421 bits (1083), Expect = e-115,   Method: Composition-based stats.
 Identities = 185/397 (46%), Positives = 270/397 (68%), Gaps = 13/397 (3%)

Query: 249 LAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQ 307
           + +++DLFH+ E+  G++FWH KGW+I+  + +Y+R  + +  Y+E++TPQ++D+ LW++
Sbjct: 1   MGKQLDLFHVQEEAPGMVFWHDKGWQIYIIIQNYIRHLLRQHHYQEVHTPQLVDRSLWEK 60

Query: 308 SGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGS 367
           SGHWD +  +MF       T  + R +A+KPMNCP H+ +FN GLKSYR+LP+RLAEFGS
Sbjct: 61  SGHWDKFGDDMFV------TQSENREYAVKPMNCPCHIQIFNQGLKSYRDLPLRLAEFGS 114

Query: 368 VYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKL 427
            +RNE SG+LHGLMR+RGF QDDAH+FCT +Q+  E     +L+  +Y DFGF+ I++KL
Sbjct: 115 CHRNEASGTLHGLMRIRGFVQDDAHIFCTDDQIQQEVSDFIDLLFKVYTDFGFKNILIKL 174

Query: 428 STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAI 487
           STRPEKRVGSD +WD AE  ++  L+        ++   +  GEGAFYGPK E++LKD +
Sbjct: 175 STRPEKRVGSDEVWDKAEKALELALN------NKKLAWDLQPGEGAFYGPKIEFVLKDCL 228

Query: 488 GRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
            R WQCGTIQVDF++P R  A Y+ +   K  PVM+HRA+ GS+ERFIG++IE + G LP
Sbjct: 229 DRVWQCGTIQVDFSMPDRLGATYIAADGSKQVPVMLHRAILGSLERFIGVLIEEYAGALP 288

Query: 548 LWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIII 607
           LWL+P+Q ++  IT    +YA++I   L      +E+D RNE I +KIREH+++KIP ++
Sbjct: 289 LWLAPVQVVILNITDEHADYAKQIEVKLLKEGFRVESDLRNEKIGFKIREHTLQKIPYLL 348

Query: 608 ICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           I G +E   + + +R         + +   I  L  E
Sbjct: 349 IIGGREIETQQVTVRLRNGEDKGAMLIDTFIEQLRSE 385


>gi|291537165|emb|CBL10277.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Roseburia
           intestinalis M50/1]
          Length = 494

 Score =  421 bits (1082), Expect = e-115,   Method: Composition-based stats.
 Identities = 194/509 (38%), Positives = 313/509 (61%), Gaps = 22/509 (4%)

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE-L 119
           ++  ++   L  + HSCAH+MA+AV+ ++P  +  +GP++++GFYYD D      +D+ +
Sbjct: 1   MVDFKEDERLNTLNHSCAHVMAQAVKHLYPNAKFWVGPVVKEGFYYDIDLGDTAVNDDVI 60

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A IEK+M+++        ++ +S  +A ELF+   + YK+++++ +    N+++Y QG++
Sbjct: 61  AAIEKEMKKVCKEGKKIYRREISKAEALELFK--DDEYKLDLIDGL-EDGNISVYDQGDF 117

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHV +T   K F KL+K +G YW+GD+N  ++ RIYG  + T +EL ++L  LE
Sbjct: 118 TDLCRGPHVDNTKLCKNF-KLIKYSGVYWKGDANNHVMQRIYGVCFPTAEELEEHLKLLE 176

Query: 240 ESEKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTP 297
           E++ RDHRK+ +EM LF   +  G G+  +  KG+ ++Q L +Y++ ++ K  Y  + TP
Sbjct: 177 EAKDRDHRKIGKEMHLFMSDDLVGRGLPMFLPKGYTVWQELENYIKAKERKLGYLHVMTP 236

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            V   +L++ SGHWD Y+ NMF          +  +F L+PMNCP H+ ++ + + SY++
Sbjct: 237 CVGTVNLYKTSGHWDHYKENMFPAMEV-----EGESFVLRPMNCPHHMMIYANRMHSYKD 291

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+ E    +R E SG+L G+ R R F Q+DAH+F T EQ+ +E  K+  LI   YKD
Sbjct: 292 LPIRIGEIAHDFRFEASGTLKGIERGRHFCQNDAHLFVTPEQIESEFAKVVELIFDTYKD 351

Query: 418 FGFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           F        LS R  +        D +W++AEN ++ VLD I       I     +GE A
Sbjct: 352 FNITDYRCVLSLRDPEDKVKYHDDDEMWNNAENALRKVLDDIG------IEYTEEIGEAA 405

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  +K AIG ++   T Q+DF LP++FN  Y++S   K  PV++HRA+ GS++R
Sbjct: 406 FYGPKLDVNVKPAIGNEYTLSTCQLDFCLPAKFNLSYIDSDGTKKTPVVLHRAILGSLDR 465

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITS 562
           F+  ++E  KGNLPLWL+P+QA +  +  
Sbjct: 466 FMAYILEETKGNLPLWLAPVQAKILPVKK 494


>gi|47459403|ref|YP_016265.1| threonyl-tRNA synthetase [Mycoplasma mobile 163K]
 gi|47458733|gb|AAT28054.1| threonyl-tRNA synthetase [Mycoplasma mobile 163K]
          Length = 579

 Score =  420 bits (1080), Expect = e-115,   Method: Composition-based stats.
 Identities = 202/590 (34%), Positives = 328/590 (55%), Gaps = 35/590 (5%)

Query: 69  SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQE 128
           +   + H+ +H++A AV  ++P  ++  GP I++GFYYDF  E+P   ++L +I+K+MQ+
Sbjct: 3   ANKQLNHTASHLLATAVLKLFPNTKLGFGPAIDEGFYYDFKFEKPLLEEDLKKIKKEMQK 62

Query: 129 IIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIP-AKENVTLYRQGE-------WF 180
           I  ++    K +       E F + ++ +K E+ + +    ENVT Y   +       + 
Sbjct: 63  ITKQNYILEKHHG------EDFFNSEKPFKKELYDELKQKGENVTFYAIKDPRLNKIIFN 116

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLC G H+++  +VK F +L+ +AGAYWRG+S++  L+RIYGTAW TQ+EL QYL  L+E
Sbjct: 117 DLCLGNHIQNVSEVKHF-ELLSIAGAYWRGNSDKEQLTRIYGTAWETQEELDQYLDLLKE 175

Query: 241 SEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
            ++RDHR +A+ +DLF  +     G   W   G KI   ++  +        ++E++TP 
Sbjct: 176 RKERDHRTIAKNLDLFMFSPLSGLGFPIWLENGMKIKNAIMKTVLELDDRYGFDEVHTPI 235

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V +Q L++ SGHW  Y+ +M+     ++         L+PM CP H+ +FN  L SYR+L
Sbjct: 236 VGEQKLYETSGHWAHYKDDMYPPIKVEN-----ENLILRPMTCPHHILIFNSRLYSYRDL 290

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P R +E   ++R+E SG+L G  RVR     + H+F  K Q+ +E   ++ +I      F
Sbjct: 291 PKRFSEQSWLFRHEKSGALTGFERVRALQLTEGHIFARKSQIVDEFKHLYKMINEALSIF 350

Query: 419 GFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           G +   V  S R  K        D LW+ AE  ++ VL  +K      I    ++GE AF
Sbjct: 351 GIKIDYVSFSRRDPKDKEKFYQDDKLWETAEKDLETVLKELK------IEYKEMIGEAAF 404

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK ++ ++  +  +    T+Q+DF LP +F+  YVN ++E+  PV+IHR + G+ ERF
Sbjct: 405 YGPKIDFQVRTVLNHEITMSTLQLDFLLPEKFDMSYVNENNEREKPVLIHRGLIGTYERF 464

Query: 535 IGIMIENFKGNLPLWLSPIQ---AIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           + I++E  KG  P WL+P Q   A+V       +EYA  +   LKS    +  D R+E +
Sbjct: 465 LSILLEQNKGVFPFWLAPKQFAIAVVNPNDKMQIEYADSVYKTLKSKKFHVYFDNRDERL 524

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           + KIRE  I K   I + G++EA  ++I IR +G  +T   ++ + +  L
Sbjct: 525 SKKIREAQISKTKYIFVIGEEEAKTKTITIRAYGEESTTTSTIENFLKNL 574


>gi|89100585|ref|ZP_01173444.1| threonyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
 gi|89084689|gb|EAR63831.1| threonyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
          Length = 423

 Score =  418 bits (1073), Expect = e-114,   Method: Composition-based stats.
 Identities = 168/423 (39%), Positives = 257/423 (60%), Gaps = 14/423 (3%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLIS-YMR 284
             +      +    E+EKR+HRKL  E++LF   E+  G+ F+  KG ++   L + + +
Sbjct: 11  FKKFLGGIKMSIKAEAEKRNHRKLGAELELFMFREEAPGMPFYLPKGMQVRNILENLWKQ 70

Query: 285 RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           +  K  Y E+ TP ++ Q LW+QSGHWD Y  NM+  K       D   +A+KPM+CPG 
Sbjct: 71  KHHKAGYHEVKTPIMMKQALWEQSGHWDHYHENMYFSKV------DEHDYAIKPMSCPGA 124

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           V +++   +SYRELP+R AE G V+R+E SGSL+GL+RVR FTQDDAH+F  ++Q+  E 
Sbjct: 125 VLIYSSKRRSYRELPLRYAELGLVHRHELSGSLNGLLRVRSFTQDDAHLFVREDQIKEEA 184

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            K+  L+   Y  FGFE   V+LSTRPE+ +GS+  W+ AE  ++ VL       +  I 
Sbjct: 185 AKVLELVHEFYSLFGFEY-KVELSTRPEEFMGSEETWNLAEASLESVLQ------ERGIP 237

Query: 465 TGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIH 524
             +  G+GAFYGPK ++ + D++GR WQCGT+Q+DF +P +F   Y+   +    P+MIH
Sbjct: 238 FEINSGDGAFYGPKIDFHITDSLGRSWQCGTVQLDFQMPEQFGCQYIGEDNLAHRPIMIH 297

Query: 525 RAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIET 584
           RA++GSIERF+ I+IE++ G+ P WLSP+QA+V  ++ + + YA E+   L+     I+ 
Sbjct: 298 RAIYGSIERFLAILIEHYAGDFPFWLSPVQAMVLPVSEAHIGYALEVKARLEEAGCRIDI 357

Query: 585 DFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           D R E +  KIRE  ++K+P +II G+KE  +    +R+ G+     + L + +     E
Sbjct: 358 DSRAEKLGLKIREAELQKVPYMIIIGEKEIEQGGAALRKKGAGNLGVLHLQELLDRFRDE 417

Query: 645 SLP 647
             P
Sbjct: 418 DRP 420


>gi|304373385|ref|YP_003856594.1| Threonyl-tRNA synthetase [Mycoplasma hyorhinis HUB-1]
 gi|304309576|gb|ADM22056.1| Threonyl-tRNA synthetase [Mycoplasma hyorhinis HUB-1]
          Length = 581

 Score =  417 bits (1071), Expect = e-114,   Method: Composition-based stats.
 Identities = 200/585 (34%), Positives = 316/585 (54%), Gaps = 33/585 (5%)

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIAR 132
           + HS +H++A AV  ++P+VQ+  GP  ++GFYYDF    P S  +L +IEK MQ++   
Sbjct: 8   LNHSASHLLALAVIKLFPDVQLGFGPATDEGFYYDFKFVNPLSEHDLIKIEKMMQKLANN 67

Query: 133 DSPFLKQYLSHEKARELFESKKEAYKVEILESI-PAKENVTLYRQGE-------WFDLCR 184
           +       +  +      +  K+ +K E+L+        +T +           + DLC 
Sbjct: 68  NF------VMKQTLGTQIDFSKQIFKKELLDQFTSENRKITFFSIVNPTKNEYLFEDLCA 121

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           G H+ +  Q+K F KL+ +AGAYWRG      L+RIYGTAW+T++EL ++L+ L+E ++R
Sbjct: 122 GGHIENMKQIKHF-KLLSIAGAYWRGKVENEQLTRIYGTAWDTKEELEEFLHILQERKER 180

Query: 245 DHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTL-ISYMRRKIKDDYEEINTPQVLDQ 302
           DHRKL +E+ LF   +  G G   W   G KI   +    +    K  ++E+ TP   +Q
Sbjct: 181 DHRKLGKELKLFTFNKLFGQGFPIWLEDGMKIVNKIKEKILFYDKKYGFKEVFTPHFGEQ 240

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            L++ SGH+  Y+ +MF          +      +PM CP H+ +F+   KSYRELP R+
Sbjct: 241 KLYEISGHFTHYKEDMFGALVV-----EGENLIPRPMTCPHHIILFDTFKKSYRELPYRI 295

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           +E   +YR E SG+L GL RVR     + H+F  K Q+ +E   ++ +I  + K F  E 
Sbjct: 296 SEQSRLYRYEKSGALTGLERVRSMLLTEGHIFVAKTQIVDEFKHLYQMISEVLKFFKIEV 355

Query: 423 IMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
             V  S R  +        D +W+ AE+ ++ VL  +    Q++I      GE AFYGPK
Sbjct: 356 NYVSFSKRDPENKEKFFDDDQMWNQAESDLEKVLKELGVEYQEKI------GEAAFYGPK 409

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++ +K  +  +    T+Q+DF LP +F+  ++N  + K  P++IHR + G+ ERF+ I+
Sbjct: 410 IDFQIKTVLNHEITISTLQLDFLLPKKFDISFINQDNAKETPILIHRGLIGTYERFVSIL 469

Query: 539 IENFKGNLPLWLSPIQAIVTTI-TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +E  KG LP WLSP Q +V  I  S   ++A EIA  L+  + ++  D RNE IN KIRE
Sbjct: 470 LEQTKGILPFWLSPKQFVVIPIENSKHSDFALEIAKKLEELNFNVTVDDRNERINKKIRE 529

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             ++K    II GD+E   ++I  R +G   +  ++  D I  + 
Sbjct: 530 AQMQKTKFQIIVGDQEVENKNITYREYGQQNSNTLNFEDLIKFIK 574


>gi|330723715|gb|AEC46085.1| threonyl-tRNA synthetase [Mycoplasma hyorhinis MCLD]
          Length = 581

 Score =  417 bits (1071), Expect = e-114,   Method: Composition-based stats.
 Identities = 201/585 (34%), Positives = 316/585 (54%), Gaps = 33/585 (5%)

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIAR 132
           + HS +H++A AV  ++P+VQ+  GP  ++GFYYDF    P S  +L +IEK MQ++   
Sbjct: 8   LNHSASHLLALAVIKLFPDVQLGFGPATDEGFYYDFKFVNPLSEHDLIKIEKMMQKLANN 67

Query: 133 DSPFLKQYLSHEKARELFESKKEAYKVEILESI-PAKENVTLYRQGE-------WFDLCR 184
           +       +  +      +  K+ +K E+L+        +T +           + DLC 
Sbjct: 68  NF------VMKQTLGTQIDFSKQIFKKELLDKFTSENRKITFFSIVNPTKNEYLFEDLCA 121

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           G H+ +  Q+K F KL+ +AGAYWRG      L+RIYGTAW+T++EL ++L+ L+E ++R
Sbjct: 122 GGHIENMKQIKHF-KLLSIAGAYWRGKVENEQLTRIYGTAWDTKEELEEFLHILQERKER 180

Query: 245 DHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTL-ISYMRRKIKDDYEEINTPQVLDQ 302
           DHRKL +E+ LF   +  G G   W   G KI   +    +    K  ++E+ TP   +Q
Sbjct: 181 DHRKLGKELKLFTFNKLFGQGFPIWLEDGMKIVNKIKEKILFYDKKYGFKEVFTPHFGEQ 240

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            L++ SGH+  Y+ +MF          +      +PM CP H+ +F+   KSYRELP R+
Sbjct: 241 KLYEISGHFAHYKEDMFGALVV-----EGENLIPRPMTCPHHIILFDTFKKSYRELPYRI 295

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           +E   +YR E SG+L GL RVR     + H+F  K Q+ +E   ++ +I  + K F  E 
Sbjct: 296 SEQSRLYRYEKSGALTGLERVRSMLLTEGHIFVAKTQIVDEFKHLYQMISEVLKFFKIEV 355

Query: 423 IMVKLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
             V  S R      K    D +W+ AE+ ++ VL  +    Q++I      GE AFYGPK
Sbjct: 356 NYVSFSKRDPENKEKFFDDDQMWNQAESDLEKVLKELGVEYQEKI------GEAAFYGPK 409

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++ +K  +  +    T+Q+DF LP +F+  ++N  + K  P++IHR + G+ ERF+ I+
Sbjct: 410 IDFQIKTVLNHEITISTLQLDFLLPKKFDISFINQDNAKETPILIHRGLIGTYERFVSIL 469

Query: 539 IENFKGNLPLWLSPIQAIVTTI-TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +E  KG LP WLSP Q +V  I  S   ++A EIA  L+  + ++  D RNE IN KIRE
Sbjct: 470 LEQTKGILPFWLSPKQFVVIPIENSKHSDFALEIAKKLEELNFNVTVDDRNERINKKIRE 529

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             ++K    II GD+E   ++I  R +G   +  ++  D I  + 
Sbjct: 530 AQMQKTKFQIIVGDQEVENKNITYREYGQQNSNTLNFEDLIKFIK 574


>gi|91226476|ref|ZP_01261225.1| threonyl-tRNA synthetase [Vibrio alginolyticus 12G01]
 gi|91189108|gb|EAS75389.1| threonyl-tRNA synthetase [Vibrio alginolyticus 12G01]
          Length = 410

 Score =  416 bits (1070), Expect = e-114,   Method: Composition-based stats.
 Identities = 189/414 (45%), Positives = 281/414 (67%), Gaps = 11/414 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  +VA+SI   LAK  +A  +NG   D  D +  + S+EIIT +
Sbjct: 4   ITLPDGSQRQFDNPVSTMEVAQSIGPGLAKATIAGRVNGNRVDACDLIEEDASLEIITVK 63

Query: 66  DP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  A++ ++P+ ++AIGP I++GFYYD D ++  + ++L +IEK
Sbjct: 64  DEVDGLEIVRHSCAHLLGHALKQLYPQAKMAIGPTIDNGFYYDIDLDESLTQEDLEKIEK 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLC 183
           +M+E+       +K+ +S ++AR+ FES+ E YKVEIL E++   +   LY   E+ D+C
Sbjct: 124 RMKELAKTKYEVVKKKVSWQEARDTFESRGEPYKVEILDENVSRDDRPGLYHHEEYIDMC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV +    + F  L  VAGAYWRG+S+  ML RIYGTA++ ++ L  +L  LEE+ K
Sbjct: 184 RGPHVPNMSFCQHFTLL-NVAGAYWRGNSDNKMLQRIYGTAFHDKKALKAHLTRLEEAAK 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRK+ +++DLFH+ ++  G++FWH  GW IF+ L  ++R K+ +  Y+E+  P ++D+
Sbjct: 243 RDHRKIGKQLDLFHMQQEAPGMVFWHHNGWSIFRDLEVFIRAKLDEYGYQEVKGPLMMDR 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV +FN GLKSYR+LP+R+
Sbjct: 303 VLWERSGHWDKYADAMFT------TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRM 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           AEFGS +RNEPSG+LHG+MRVRGFTQDDAH+FCT+ Q+  E      ++   Y+
Sbjct: 357 AEFGSCHRNEPSGALHGIMRVRGFTQDDAHIFCTESQIQEEVTNCIKMVYDTYQ 410


>gi|146169598|ref|XP_001017218.2| threonyl-tRNA synthetase family protein [Tetrahymena thermophila]
 gi|146145134|gb|EAR96973.2| threonyl-tRNA synthetase family protein [Tetrahymena thermophila
           SB210]
          Length = 882

 Score =  416 bits (1069), Expect = e-114,   Method: Composition-based stats.
 Identities = 201/585 (34%), Positives = 299/585 (51%), Gaps = 66/585 (11%)

Query: 4   DIKLTFPDGSI---KNFPVHATGSDVAESISRSLAKKAVAVAI----------------- 43
           +I +T  DG     K F    T S +A+SI + + +K V   I                 
Sbjct: 61  EITVTLKDGKTIPGKAFE--TTPSHIAKSIFKKVPEKFVGAKIVYSKKYESELTKIGEYV 118

Query: 44  -----------------NGK----VCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIM 81
                            +G+    V DL  P+  + ++E+I  E      V  HS AH++
Sbjct: 119 DAEAEEVAEEGGDCCGGHGEQKFEVYDLERPLEGDCTLELIDFECQEGREVFWHSSAHML 178

Query: 82  AEAVQSIWPEVQVAIGPIIEDGFYYD-FDKEQPFSSDELAQIEKKMQEIIARDSPFLKQY 140
            +A++  +  V + IGP + +GF+YD +   +  S D  A+IEK   ++ +   PF +  
Sbjct: 179 GQALELNY-GVHLCIGPPLANGFFYDSYMGNEKISQDNFAEIEKTFAKVASEKQPFQRVI 237

Query: 141 LSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFK 199
           L+ ++A ELF+     +KV+++   IP     T Y+ G+  DLC GPH+  TG VK F K
Sbjct: 238 LTKKQALELFK--HNPFKVQLITNKIPDNAITTAYKCGKLIDLCTGPHLPHTGYVKAF-K 294

Query: 200 LMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIA 259
           + K + AYW G +    L R+YG A+ +++EL  ++   EE  KRDHR + ++ +LF   
Sbjct: 295 VEKNSAAYWLGKNTNDGLQRVYGIAFPSKKELDAHVLRQEELAKRDHRNIGKQQELFTFH 354

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANM 318
           +   G  F++  G  I+  L+  +R++ K   Y E+ TP + D  LW+ SGHWD Y+ NM
Sbjct: 355 QFSPGCAFFYPNGAHIYNKLMEVLRKQYKIRGYSEVITPNLFDAQLWKISGHWDKYKENM 414

Query: 319 FAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLH 378
           F +K       D      KPMNCP H  +F+   +SYR+LP+R A+FG ++RNE  G+L 
Sbjct: 415 FLLK------NDNEEHGFKPMNCPAHCLMFDSIQRSYRDLPLRYADFGVLHRNEVHGALS 468

Query: 379 GLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD 438
           GL RVR F QDDAH+FCT +Q+  E     + I  +Y  FGF+  +  LSTRP+  +G  
Sbjct: 469 GLTRVRRFQQDDAHIFCTMDQIMEEIKNALDFIDYMYSLFGFKYSLA-LSTRPDNYIGEI 527

Query: 439 ALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
            +WD AEN +K  L+             +   +GAFYGPK +  L DA  R  QCGTIQ+
Sbjct: 528 EMWDQAENALKKGLEAFGKPW------AIKAKDGAFYGPKIDIQLYDAFDRGHQCGTIQL 581

Query: 499 DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           DFNLP RFN  Y    +     +   R    S E  + +  E  K
Sbjct: 582 DFNLPIRFNLQYRAPEN--KDDIEKQRKKQESTEESVPLSQEEKK 624



 Score =  137 bits (345), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 39/114 (34%), Positives = 62/114 (54%)

Query: 518 CHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKS 577
             PV++HRAV GS ERF+ I+ E   G  P WLSP Q I+  IT+   ++AQ++A+ LK 
Sbjct: 673 QRPVILHRAVIGSFERFLAILCEQTAGKWPFWLSPKQLIICPITAKVNDFAQDVADRLKV 732

Query: 578 HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
               +  D    TI  K+R   +++   I + G++E     + +R   +T  Q+
Sbjct: 733 EGYKVAVDLSESTIQKKVRNAQLEQYNYIAVVGEEEKRGGYVDLRARDTTKDQE 786


>gi|294499151|ref|YP_003562851.1| threonyl-tRNA synthetase [Bacillus megaterium QM B1551]
 gi|294349088|gb|ADE69417.1| threonyl-tRNA synthetase [Bacillus megaterium QM B1551]
          Length = 405

 Score =  415 bits (1067), Expect = e-113,   Method: Composition-based stats.
 Identities = 172/412 (41%), Positives = 257/412 (62%), Gaps = 14/412 (3%)

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEE 293
           +    E+EKR+H+KL +E++LF   E+  G+ F+   G  I   L +Y  ++  K  Y+E
Sbjct: 1   MSKQMEAEKRNHQKLGQELELFMSIEEAPGMPFFLPNGMIIRNELENYWKQKHYKAGYQE 60

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           I TP ++ Q LW+QSGHW+ Y  NM+       +  D + +A+KPMNCPG + +F+   +
Sbjct: 61  IKTPIMMKQELWEQSGHWEHYHENMYF------SNVDEQNYAIKPMNCPGAILLFSSKRR 114

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYRELP+R AE G V+R+E SGSL+GL+RVR FTQDDAH+F    Q+  E  +I   I  
Sbjct: 115 SYRELPIRYAELGLVHRHELSGSLNGLLRVRSFTQDDAHLFVELSQIEAEISRILAFIHD 174

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
            Y  FGF+   V+LSTRPEK +G+   W+ AE  ++ VL      S+  ++  V  G+GA
Sbjct: 175 FYSHFGFDY-KVELSTRPEKFMGNIETWNQAEKSLQSVL------SEKGLDYQVNEGDGA 227

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK ++ + D++GR WQCGT+Q+DF +P +F+  Y+   ++   PVMIHRA++GS+ER
Sbjct: 228 FYGPKIDFHILDSLGRSWQCGTVQLDFLMPEKFDCMYIGEDNKPHRPVMIHRAIYGSVER 287

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           F+ I+IE+++G  PLWL+P+Q  +  I    VEYA ++ + L+     +E D R E I  
Sbjct: 288 FMAILIEHYEGQFPLWLAPVQLKLLPIAPPHVEYAYKVKHELELKGYRVEVDDRIEKIGL 347

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           KIRE  ++K+P + + GDKE    S+ +R+ G      VS+ +A   L KE 
Sbjct: 348 KIREAEMQKVPYMAVIGDKEVENESLAMRKHGKKNIGTVSMEEAAVHLNKEK 399


>gi|145511255|ref|XP_001441555.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124408805|emb|CAK74158.1| unnamed protein product [Paramecium tetraurelia]
          Length = 937

 Score =  415 bits (1066), Expect = e-113,   Method: Composition-based stats.
 Identities = 183/547 (33%), Positives = 290/547 (53%), Gaps = 51/547 (9%)

Query: 3   SDIKLTFPDGSIKNFPVH-ATGSDVAESISRSLAKKAVAVAI------------------ 43
           + IK+T  DG          T   +A  IS+ +A+  VA  +                  
Sbjct: 58  TPIKITLKDGKQIEGKKWVTTPLSIALGISKKMAENMVAAKVVYETIFEKSFVDVDHEET 117

Query: 44  ------------NGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWP 90
                       +  + DL+ P+  + S+E+++ +D     V  HS AHI+  A++ I+ 
Sbjct: 118 SSQASSTIHQKPDYLIWDLTRPLEGDCSLELLSFDDKNGQEVFWHSSAHILGAALEEIY- 176

Query: 91  EVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKAREL 149
              + IGP IE GF+YD    +   + ++  +IEK  Q+++A    F +  L+ E+  E+
Sbjct: 177 GCHLCIGPAIEGGFFYDCYIGDIKVTQNDYVKIEKAAQDLVAAKQEFQRAILTKEECLEI 236

Query: 150 FESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYW 208
                  +K +++   IP     T YR G   DLC GPH+ +T  VK F  + K + AYW
Sbjct: 237 --FGSNPFKRQLITNKIPDGSLTTAYRCGNLIDLCTGPHLPNTSYVKAFQ-ITKNSAAYW 293

Query: 209 RGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFW 268
            G +    L R+YG  +  ++ L +Y+   +E  +RDHR + ++ +L+   +   G  F+
Sbjct: 294 LGKNTNDDLQRVYGITFPNKKLLDEYVKIQKELAQRDHRNVGKKQNLYLFHQLSPGSAFF 353

Query: 269 HRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
           +  G  I+ TL++++RR+     Y+E+ +P + +  LW+ SGH+D Y+ N+F +      
Sbjct: 354 YPSGAHIYNTLMNFLRRQYYIRGYQEVISPNIFNAQLWKISGHYDKYKENLFFI-----N 408

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
           + +   + LKPMNCPGH  +F+    SYR+LP+R A+FG ++RNE  G+L GL RVR F 
Sbjct: 409 MGEEGEYGLKPMNCPGHCLMFDMVQHSYRDLPIRFADFGVLHRNEVHGALTGLTRVRRFQ 468

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENI 447
           QDDAH+FC  +Q+ +E     + +  IY  FGFE  +  LSTRPEK +G+  +WD+AE  
Sbjct: 469 QDDAHIFCRMDQIQDEIKNCLDFLSYIYSLFGFEFKL-YLSTRPEKFLGTKDVWDNAEYQ 527

Query: 448 MKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFN 507
           ++  L           +  +  G+GAFYGPK +  L DA  R+ QCGTIQ+DFNLP RFN
Sbjct: 528 LEQGLKKFGK------HFEINPGDGAFYGPKIDVKLYDAYKREHQCGTIQLDFNLPERFN 581

Query: 508 AFYVNSH 514
             +  S 
Sbjct: 582 LQFRASE 588



 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 44/148 (29%), Positives = 76/148 (51%), Gaps = 7/148 (4%)

Query: 504 SRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSS 563
            ++   Y +       PV+IHRA+ GS+ER I ++ E   G  P WLSP Q I+  +++ 
Sbjct: 715 KKYELGYHHLKPGFARPVIIHRAILGSLERMIAVLTEQCGGKWPFWLSPKQLILCPVSAY 774

Query: 564 AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRR 623
             + A++I+  L+    ++ TD  ++T+  K+R   ++    + + G++E     I IR 
Sbjct: 775 YRDVAEKISARLRLEGYTVNTDESDQTLAKKVRNAQVQYYNFVGVIGEEEVRTGVIDIRD 834

Query: 624 -FGSTTTQKVSLLDAIPILTK--ESLPP 648
              +T   K++    IP L K  ESL P
Sbjct: 835 CEKNTRIGKLT----IPQLCKFFESLKP 858


>gi|330888315|gb|EGH20976.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. mori str.
           301020]
          Length = 402

 Score =  414 bits (1065), Expect = e-113,   Method: Composition-based stats.
 Identities = 199/412 (48%), Positives = 287/412 (69%), Gaps = 12/412 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS ++F    + +DVA SI   LAK  VA  ++GK+ D  D +  + S+
Sbjct: 1   MP---TITLPDGSQRSFDHAVSVADVALSIGAGLAKATVAGKVDGKLVDACDLIENDVSL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           +IITP+D   L +IRHSCAH++  AV+ ++P  ++ IGP+I+DGFYYD   E+PF+ D++
Sbjct: 58  QIITPKDQEGLEIIRHSCAHLVGHAVKQLYPTAKMVIGPVIDDGFYYDIAYERPFTPDDM 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A IE++MQ++I +D   +K+     +  E+F ++ E YK+ ++E +P ++ + LY   E+
Sbjct: 118 AAIEQRMQQLIEKDYDVIKKVTPRAEVIEVFTARHEDYKLRLVEDMPNEQAMGLYYHEEY 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            D+CRGPHV +T  +K F KL K++GAYWRGD+    L R+YGTAW  +++L  Y+  +E
Sbjct: 178 VDMCRGPHVPNTRFLKSF-KLTKLSGAYWRGDAKNEQLQRVYGTAWADKKQLAAYIQRIE 236

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           E+EKRDHRK+ + + LFH  E+  G++FWH +GW ++Q L  YMR+ + ++ Y EI TPQ
Sbjct: 237 EAEKRDHRKIGKRLGLFHTQEEAPGMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQ 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V+D+ LW++SGHW +Y  NMF       T  + R +A+KPMNCP HV VFN GLKSYREL
Sbjct: 297 VVDRSLWEKSGHWANYADNMFT------TESESRDYAIKPMNCPCHVQVFNQGLKSYREL 350

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
           P+RLAEFG+ +RNEPSG+LHG+MRVRGFTQDDAH+FCT++QM  E      L
Sbjct: 351 PMRLAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEDQMQAESAAFIKL 402


>gi|322796311|gb|EFZ18882.1| hypothetical protein SINV_16250 [Solenopsis invicta]
          Length = 807

 Score =  414 bits (1065), Expect = e-113,   Method: Composition-based stats.
 Identities = 186/614 (30%), Positives = 303/614 (49%), Gaps = 50/614 (8%)

Query: 47  VCDLSDPVREGSIEI-----ITPEDPRSLAVI---RHSCAHIMAEAVQSIWPEVQVAIGP 98
           + D      + S+       IT   P    +      +  + +A+ +     +  V    
Sbjct: 213 LWDKLKKEYDDSVAAKTPANITVTLPDGKKISGKSWRTTPYDVAKGISQGLADNTVIAKV 272

Query: 99  IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYK 158
             E      +D ++P  SD          +++  D P  +Q   H  A  L E+ +  Y 
Sbjct: 273 NNE-----LWDLDRPLESD-------CKLQLLKFDEPEGQQVFWHSSAHVLGEAMERVYG 320

Query: 159 VEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKK----FFKLMKVAGAYWRGDSNR 214
             +    P +        G ++D+  G    S          +  ++K    + R +  +
Sbjct: 321 GCLCYGPPIE-------NGFYYDMYLGDQGISNADFPYLESLYKNIVKEKQQFERLEMTK 373

Query: 215 PMLSRIYGTAWNTQQELTQYLYFLEESE----KRDHRKLAREMDLFHIAEDGSGVIFWHR 270
             L  ++       + + + ++    +     KRDHRK+ +E +L+   E   G  F+  
Sbjct: 374 EDLLEMFKYNEFKVRIINERIHTPTTTAYRCAKRDHRKIGKEQELYFFHELSPGSCFFQP 433

Query: 271 KGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
           +G  I+ TL+ ++R + +   ++E+ TP + +  LWQ SGHW  Y  NMF+         
Sbjct: 434 RGAYIYNTLMEFIRSEYRKRGFQEVITPNIYNSKLWQTSGHWQHYAENMFSFDV------ 487

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
           +  TFALKPMNCPGH  +F+   +S+RELP+RLA+FG ++RNE SG+L GL RVR F QD
Sbjct: 488 EKETFALKPMNCPGHCLIFDVRCRSWRELPLRLADFGVLHRNELSGALTGLTRVRRFQQD 547

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMK 449
           DAH+FC+ EQ+ +E     + +  +Y   GF   +  LSTRPEK +G   +W++AE  ++
Sbjct: 548 DAHIFCSIEQIKDEISGALDFLWHVYSVLGFTFNLC-LSTRPEKFMGDIEVWNEAEKALE 606

Query: 450 GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAF 509
             L+             +   +GAFYGPK +  + DA+ R  Q  TIQ+DF LP RFN  
Sbjct: 607 ESLNAFGQPW------SLNPEDGAFYGPKIDITIMDALKRAHQTATIQLDFQLPIRFNLS 660

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQ 569
           YVN   EK  PV+IHRA+ GS+ER I I+ E++ G  P WLSP QA+V  + S   +YA 
Sbjct: 661 YVNEAGEKTRPVIIHRAILGSVERMIAIVTESYGGKWPYWLSPRQAMVVPVASQFDDYAY 720

Query: 570 EIANLLKSHHLSIETD-FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
           E+   L    + +E D   ++T+N KIR   + +   I++ G+KE +  ++ +R   +T 
Sbjct: 721 EVKQKLWDAGVMVEVDTDSSDTLNKKIRNAQLAQFNFILVVGEKERNAGTVNVRTRDNTV 780

Query: 629 TQKVSLLDAIPILT 642
             ++++ + I  L 
Sbjct: 781 HGEIAVDELIVKLK 794



 Score =  177 bits (449), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 50/178 (28%), Positives = 88/178 (49%), Gaps = 6/178 (3%)

Query: 2   PSDIKLTFPDGSIKNF-PVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           P++I +T PDG   +      T  DVA+ IS+ LA   V   +N ++ DL  P+  +  +
Sbjct: 230 PANITVTLPDGKKISGKSWRTTPYDVAKGISQGLADNTVIAKVNNELWDLDRPLESDCKL 289

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDE 118
           +++  ++P    V  HS AH++ EA++ ++    +  GP IE+GFYYD    +Q  S+ +
Sbjct: 290 QLLKFDEPEGQQVFWHSSAHVLGEAMERVYGGC-LCYGPPIENGFYYDMYLGDQGISNAD 348

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
              +E   + I+     F +  ++ E   E+F+     +KV I+         T YR 
Sbjct: 349 FPYLESLYKNIVKEKQQFERLEMTKEDLLEMFKY--NEFKVRIINERIHTPTTTAYRC 404


>gi|315123806|ref|YP_004065810.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|315017528|gb|ADT65621.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
          Length = 457

 Score =  414 bits (1065), Expect = e-113,   Method: Composition-based stats.
 Identities = 188/467 (40%), Positives = 286/467 (61%), Gaps = 17/467 (3%)

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           +CRGPHV +T  ++ FFKL +VAGAY  GD  R ML+RIYGTA+  ++ L +YL  +EE+
Sbjct: 1   MCRGPHVPNTKFLR-FFKLTRVAGAYLGGDEKREMLTRIYGTAFADKESLKEYLTIIEEA 59

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           +KRDHRKL  E+ LF   ++ G G+  W   G ++   L   + +      YE +  P++
Sbjct: 60  KKRDHRKLGTELKLFTFDDEIGGGLPIWLSNGARLRSKLEHMLYKIHRLRGYEPVRGPEL 119

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           L    W+ SGH+ +Y+ NM+  +       D + + +KPMNC GH+ ++   ++SYR+LP
Sbjct: 120 LKADAWKISGHYANYKENMYFTQI------DEQEYGIKPMNCVGHIKIYQSDVRSYRDLP 173

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           ++  E+G V+R+E SG LHGL RVR FTQDDAH+FC   Q+  + L+I   + ++ K F 
Sbjct: 174 LKFFEYGVVHRHEKSGVLHGLFRVREFTQDDAHIFCMPSQIKEQVLEILAFVDNLMKLFD 233

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F   M ++ST+PEK +G D +W+ A   +K  L+      +  +  G+  G GAFYGPK 
Sbjct: 234 FSYEM-EISTKPEKAIGDDEIWEIATKALKEALN------EQGLKYGIDEGGGAFYGPKI 286

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +  + DA+ R WQCGT+QVDFNLPSRF   Y +S +EK  PVM+HRA+ GS ERFIGI+ 
Sbjct: 287 DIKITDALKRKWQCGTVQVDFNLPSRFKLEYTDSDNEKKQPVMLHRAILGSFERFIGILT 346

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E+  G  P +++P    +  I  + + YA+EI   L   ++  E   +NE+++ KIR   
Sbjct: 347 EHCAGEFPFFIAPTAVGIVPIGEAHIAYAKEIQKELLELNIDSEVYEKNESLSKKIRIAE 406

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
            +K+P+I++ GD E  +RS+ +R   +   + +SL + I  L KE +
Sbjct: 407 KQKLPMILVLGDDEVVKRSVALRDRRAKEQKNLSLDEFI-KLVKEKM 452


>gi|153217256|ref|ZP_01951020.1| threonyl-tRNA synthetase [Vibrio cholerae 1587]
 gi|124113711|gb|EAY32531.1| threonyl-tRNA synthetase [Vibrio cholerae 1587]
          Length = 410

 Score =  414 bits (1064), Expect = e-113,   Method: Composition-based stats.
 Identities = 191/414 (46%), Positives = 282/414 (68%), Gaps = 11/414 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS ++F    +  +VA+SI   LAK  +A  +NG   D  D +  + S+EIIT +
Sbjct: 4   ITLPDGSQRHFDNPVSTLEVAQSIGPGLAKATIAGRVNGVRVDACDLIEHDASLEIITTK 63

Query: 66  DP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  A++ ++P  ++AIGP I+ GFYYD D EQ  S ++L +IE 
Sbjct: 64  DEIDGLEIVRHSCAHLLGHALKQLYPNAKMAIGPTIDSGFYYDIDLEQSLSQEDLEKIEA 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLC 183
           +M E+       +K+ +S ++AR+ FES+ E+YK+EIL E++   +   LY   E+ D+C
Sbjct: 124 RMVELAKTKYAVVKKKVSWQEARDTFESRGESYKMEILDENVARDDRPGLYHHEEYIDMC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV   G  + F KL+ +AGAYWRG+S+  ML RIYGTA++ ++ L  +L  LEE+ K
Sbjct: 184 RGPHVPHMGFCQNF-KLLNIAGAYWRGNSDNKMLQRIYGTAFHDKKALQAHLTRLEEAAK 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRK+ +++DLFH+ ++  G++FWH  GW IF+ L  ++R+K+ +  Y+E+  P ++D+
Sbjct: 243 RDHRKIGKQLDLFHMQQEAPGMVFWHHNGWSIFRDLEIFIRQKLNEYGYQEVKGPLMMDR 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SGHWD Y   MF       T  + R +A+KPMNCPGH+ +FN GLKSYR+LP+R+
Sbjct: 303 VLWERSGHWDKYADAMFT------TSSENREYAIKPMNCPGHIQIFNQGLKSYRDLPLRM 356

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           AEFGS +RNEPSGSLHG+MRVRGFTQDDAH+FCT++Q+  E      ++   Y 
Sbjct: 357 AEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTEDQIQQEVTSCIKMVYDTYT 410


>gi|16553656|dbj|BAB71554.1| unnamed protein product [Homo sapiens]
          Length = 433

 Score =  414 bits (1063), Expect = e-113,   Method: Composition-based stats.
 Identities = 164/430 (38%), Positives = 245/430 (56%), Gaps = 16/430 (3%)

Query: 217 LSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIF 276
           L RIYG ++   + +  +  F EE++ RDHRK+ +E +LF   +   G  F+  +G  I+
Sbjct: 4   LQRIYGISFPDNKMMRDWEKFQEEAKNRDHRKIGKEQELFFFHDLSPGSCFFLPRGAFIY 63

Query: 277 QTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFA 335
            TL  ++R +    D+ E+ +P + +  LW+ SGHW  Y  NMF  +   DT      FA
Sbjct: 64  NTLTDFIREEYHKRDFTEVLSPNMYNSKLWEASGHWQHYSENMFTFEIEKDT------FA 117

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC 395
           LKPMNCPGH  +F H  +S+RE+P+R A+FG ++RNE SG+L GL  VR F QDDAH+FC
Sbjct: 118 LKPMNCPGHCLMFAHRPRSWREMPIRCADFGVLHRNELSGTLSGLTGVRRFQQDDAHIFC 177

Query: 396 TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTI 455
           T EQ+  E       + S+Y  FGF   +  LSTRPE  +G   +W++AE  ++  L   
Sbjct: 178 TVEQIEEEIKGCLQFLQSVYSTFGFSFQLN-LSTRPENFLGEIEMWNEAEKQLQNSLMDF 236

Query: 456 KNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS 515
               +      +  G+GAFYGPK +  +KDAIGR  QC TIQ+DF LP RFN  YV+   
Sbjct: 237 GEPWK------MNPGDGAFYGPKIDIKIKDAIGRYHQCATIQLDFQLPIRFNLTYVSKDG 290

Query: 516 -EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANL 574
            +K  PV+IHRA+ GS+ER I I+ EN+ G  P WLSP Q +V  +  +  +YA ++++ 
Sbjct: 291 DDKKRPVIIHRAILGSVERMIAILSENYGGKWPFWLSPRQVMVIPVGPTCEKYALQVSSE 350

Query: 575 LKSHHLSIETD-FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
                   + D   + T+N KIR   + +   I++ G+KE  + ++ +R   +    ++ 
Sbjct: 351 FFEEGFMADVDLDHSCTLNKKIRNAQLAQYNFILVVGEKEKIDNAVNVRTRDNKIHGEIL 410

Query: 634 LLDAIPILTK 643
           +  AI  L  
Sbjct: 411 VTSAIDKLKN 420


>gi|144574986|gb|AAZ43589.2| threonyl-tRNA synthetase [Mycoplasma synoviae 53]
          Length = 580

 Score =  414 bits (1063), Expect = e-113,   Method: Composition-based stats.
 Identities = 195/568 (34%), Positives = 310/568 (54%), Gaps = 33/568 (5%)

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIAR 132
           + H+ +H++A AV  ++PE ++  GP   +GFYYDF+ ++P S  EL +IEK M+++ +R
Sbjct: 7   LNHTTSHLLAAAVLKLFPETKLGFGPATSEGFYYDFEFKEPLSDSELLKIEKMMKKLASR 66

Query: 133 DSPFLKQYLSHEKARELFESKKEAYKVEILESIPA-KENVTLYRQGE-------WFDLCR 184
           +          + +   +    + YK E+     +  + VT Y   +       + DLC 
Sbjct: 67  NLK------MKQVSLSDYSFDNQPYKKELYNEFKSQNKEVTFYTLADPLNKEKVFTDLCA 120

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           G HV  T  +K F KL+ +AGAYWRG+S+   L+RIYGT+W T++EL ++L  L++ ++R
Sbjct: 121 GGHVEDTKHIKHF-KLLSLAGAYWRGNSDNIQLTRIYGTSWETKEELDEFLAILKDRKER 179

Query: 245 DHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           DHRK+ +EM LF     G  G  FW   G  I   + + + +   K  + E+ TP   ++
Sbjct: 180 DHRKIGKEMKLFTFNPLGGQGFPFWLEDGMHIHNEIRNLVLKMDKKYGFTEVLTPHFGEE 239

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            L++ SGH D Y+ +MF     ++          +PM CP H+ +F    +SYR+LP+R 
Sbjct: 240 KLYKISGHLDHYKDDMFKPIVCEN-----ERLIPRPMTCPHHIILFGSEKRSYRDLPIRY 294

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           +E   +YR E SG+L GL RVR     + H+F  K+Q+  E  K+  LI      F  + 
Sbjct: 295 SEQSQLYRYEKSGALTGLERVRSMLLTEGHLFVRKDQIAQEFKKMFELISDTLNAFKIKI 354

Query: 423 IMV----KLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
             V    +     EK   +D +WD AE  +K ++  +    +++I      GE AFYGPK
Sbjct: 355 NYVSLSLRDKADKEKYYANDQMWDAAEFELKKIIKELGIKYEEKI------GEAAFYGPK 408

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +  +  A+  +    TIQ+DF LP +F   Y NS + +  PV+IHR + G+ ERFI I+
Sbjct: 409 VDIQILTALNHEVTVSTIQLDFLLPQKFEISYTNSENNEEVPVLIHRGLIGTYERFISIL 468

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAV-EYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           IE  KGNLP WL+P Q  +  +  +   EYA+E+ + L +  +  + DFRNE ++ K+RE
Sbjct: 469 IEQTKGNLPFWLAPKQVTIIPVNENTDYEYAKEVNDKLLALDIRSKVDFRNERLSKKVRE 528

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFG 625
             I K    +I G+ E + ++I  RR+G
Sbjct: 529 AQISKSKFQVILGEAEKTNKTISYRRYG 556


>gi|71894192|ref|YP_278300.1| threonyl-tRNA synthetase [Mycoplasma synoviae 53]
          Length = 581

 Score =  413 bits (1062), Expect = e-113,   Method: Composition-based stats.
 Identities = 195/568 (34%), Positives = 310/568 (54%), Gaps = 33/568 (5%)

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIAR 132
           + H+ +H++A AV  ++PE ++  GP   +GFYYDF+ ++P S  EL +IEK M+++ +R
Sbjct: 8   LNHTTSHLLAAAVLKLFPETKLGFGPATSEGFYYDFEFKEPLSDSELLKIEKMMKKLASR 67

Query: 133 DSPFLKQYLSHEKARELFESKKEAYKVEILESIPA-KENVTLYRQGE-------WFDLCR 184
           +          + +   +    + YK E+     +  + VT Y   +       + DLC 
Sbjct: 68  NLK------MKQVSLSDYSFDNQPYKKELYNEFKSQNKEVTFYTLADPLNKEKVFTDLCA 121

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           G HV  T  +K F KL+ +AGAYWRG+S+   L+RIYGT+W T++EL ++L  L++ ++R
Sbjct: 122 GGHVEDTKHIKHF-KLLSLAGAYWRGNSDNIQLTRIYGTSWETKEELDEFLAILKDRKER 180

Query: 245 DHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           DHRK+ +EM LF     G  G  FW   G  I   + + + +   K  + E+ TP   ++
Sbjct: 181 DHRKIGKEMKLFTFNPLGGQGFPFWLEDGMHIHNEIRNLVLKMDKKYGFTEVLTPHFGEE 240

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            L++ SGH D Y+ +MF     ++          +PM CP H+ +F    +SYR+LP+R 
Sbjct: 241 KLYKISGHLDHYKDDMFKPIVCEN-----ERLIPRPMTCPHHIILFGSEKRSYRDLPIRY 295

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           +E   +YR E SG+L GL RVR     + H+F  K+Q+  E  K+  LI      F  + 
Sbjct: 296 SEQSQLYRYEKSGALTGLERVRSMLLTEGHLFVRKDQIAQEFKKMFELISDTLNAFKIKI 355

Query: 423 IMV----KLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
             V    +     EK   +D +WD AE  +K ++  +    +++I      GE AFYGPK
Sbjct: 356 NYVSLSLRDKADKEKYYANDQMWDAAEFELKKIIKELGIKYEEKI------GEAAFYGPK 409

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +  +  A+  +    TIQ+DF LP +F   Y NS + +  PV+IHR + G+ ERFI I+
Sbjct: 410 VDIQILTALNHEVTVSTIQLDFLLPQKFEISYTNSENNEEVPVLIHRGLIGTYERFISIL 469

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAV-EYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           IE  KGNLP WL+P Q  +  +  +   EYA+E+ + L +  +  + DFRNE ++ K+RE
Sbjct: 470 IEQTKGNLPFWLAPKQVTIIPVNENTDYEYAKEVNDKLLALDIRSKVDFRNERLSKKVRE 529

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFG 625
             I K    +I G+ E + ++I  RR+G
Sbjct: 530 AQISKSKFQVILGEAEKTNKTISYRRYG 557


>gi|323446287|gb|EGB02506.1| hypothetical protein AURANDRAFT_59726 [Aureococcus anophagefferens]
          Length = 452

 Score =  413 bits (1061), Expect = e-113,   Method: Composition-based stats.
 Identities = 175/430 (40%), Positives = 250/430 (58%), Gaps = 13/430 (3%)

Query: 216 MLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWK 274
           ML RIYGTAW    +L ++   LEE++KRDHR L +++DLF I E  G G+ FWH +G +
Sbjct: 1   MLQRIYGTAWQENWQLAEHKRRLEEAKKRDHRVLGKKLDLFSIQEAAGGGLCFWHPRGAR 60

Query: 275 IFQTLISYMRRKIKDD-YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           I   +    +   +   YE + TP + +  LW+ SGH+D Y   MF          +   
Sbjct: 61  IRMLMEDTWKAAHERGGYELLVTPHIANVDLWKTSGHFDFYAEGMFDQMDV-----EKEQ 115

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
           + LKPMNCP H  V+   L+SYR+LP R AE G+VYR E SG+L GLMRVRGFTQDDAH+
Sbjct: 116 YQLKPMNCPFHCLVYKDQLRSYRDLPFRWAELGTVYRYERSGTLQGLMRVRGFTQDDAHI 175

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
           FCT EQ+ +E + +  L   I   FGF+   + LSTRP+K VGSD +W  A   +KG LD
Sbjct: 176 FCTPEQLEDEIVAVLELTEEILSKFGFDDYELMLSTRPDKAVGSDEIWTKATAALKGALD 235

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS 513
                 +   + GV  G GAFYGPK +  +KDA+GR WQC T+Q DFNLP RF   Y  +
Sbjct: 236 ------RKGWDHGVDEGGGAFYGPKIDLKIKDALGRQWQCSTVQCDFNLPERFELEYRAA 289

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIAN 573
             +   P+M+HRA+FGS+ERF  I++E+  G+LPLWL+P Q  +  +T  A ++++ +A 
Sbjct: 290 SGQAERPIMVHRAIFGSLERFFAILLESCGGDLPLWLAPTQMRLLPVTDDARDFSKAVAA 349

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
                 +  E D   + +N +IR    +++PI+ + G+KE +   + +R         + 
Sbjct: 350 KAAQRGIRCEIDSGKDRLNKQIRNAETQRVPIMCVVGEKEMASGDLAVRARTMGDLGTID 409

Query: 634 LLDAIPILTK 643
           +      L  
Sbjct: 410 VDALFDELKD 419


>gi|238618767|ref|YP_002913592.1| threonyl-tRNA synthetase [Sulfolobus islandicus M.16.4]
 gi|259516721|sp|C4KKV9|SYT_SULIK RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|238379836|gb|ACR40924.1| threonyl-tRNA synthetase [Sulfolobus islandicus M.16.4]
          Length = 545

 Score =  412 bits (1059), Expect = e-113,   Method: Composition-based stats.
 Identities = 176/496 (35%), Positives = 285/496 (57%), Gaps = 20/496 (4%)

Query: 161 ILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRI 220
           +L ++P + N  +Y+ G    +       ST    K+F+++ ++  +    +      RI
Sbjct: 59  VLANVPIENNQIVYK-GNKVSIIEDKVSISTNLNPKYFEILNISTHH---PNPNEQYVRI 114

Query: 221 YGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTL 279
            G A+ T+++L  YL +LE++E+ DHR +  ++DLF   E+ GSG++ +H KG  I   L
Sbjct: 115 RGVAFETEEQLKDYLTWLEKAEETDHRLIGEKLDLFSFHEEAGSGLVLFHPKGQTIRNEL 174

Query: 280 ISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKP 338
           I++MR       Y+E+ T  V    +W+ SGH+  YR  +       D       + +KP
Sbjct: 175 IAFMREINDSMGYQEVYTSHVFKTDIWKISGHYTLYRDKLIVFNMEGD------EYGVKP 228

Query: 339 MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE 398
           MNCP H+ ++    ++YR+LP+R +EFG VYR E  G L+GL+RVRGF QDD H+F  ++
Sbjct: 229 MNCPAHILIYKSKPRTYRDLPIRFSEFGHVYRWEKKGELYGLLRVRGFVQDDGHIFLRED 288

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKL--STRPEKRVGSDALWDDAENIMKGVLDTIK 456
           Q+  E   + +  + ++  FGF+   +K   STRP++ +GSD LW+ A N +   L    
Sbjct: 289 QLMEEIKMLISKTVEVWHKFGFKDDDIKPYLSTRPDESIGSDELWEKATNALISALQ--- 345

Query: 457 NSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE 516
              +  +  G+   EGAFYGPK ++ ++D++GR WQ  TIQVDFNLP RF   Y++    
Sbjct: 346 ---ESGLKFGIKEKEGAFYGPKIDFEIRDSLGRWWQLSTIQVDFNLPERFKLEYIDKDGI 402

Query: 517 KCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLK 576
           K  PVM+HRA++GSI+RF+ I++E+FKG LP WLS +Q  V  IT    EYA+++ N ++
Sbjct: 403 KKRPVMVHRAIYGSIDRFVAILLEHFKGKLPTWLSSVQVRVLPITDEVNEYAEKVLNDMR 462

Query: 577 SHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
              +  E D+  ET++ +I+    + +P I+I G KEASE ++ +R  G+   + V    
Sbjct: 463 KRRIRAEIDYAGETLSKRIKNAYDQGVPYILIVGKKEASEGTVTVRARGNIEVRNVKFEK 522

Query: 637 AIPILTKESLPPDCQK 652
            + +L  E    D ++
Sbjct: 523 FLELLITEIAQRDVEQ 538


>gi|156098721|ref|XP_001615376.1| threonyl-tRNA synthetase [Plasmodium vivax SaI-1]
 gi|148804250|gb|EDL45649.1| threonyl-tRNA synthetase, putative [Plasmodium vivax]
          Length = 912

 Score =  411 bits (1057), Expect = e-112,   Method: Composition-based stats.
 Identities = 194/562 (34%), Positives = 300/562 (53%), Gaps = 68/562 (12%)

Query: 4   DIKLTFPDGSIKNFPVH-ATGSDVAESISRSLAKKAVAVAI------------------- 43
            I +   DGS++    +  T   +A SIS+ LA+ ++   +                   
Sbjct: 152 SITVQLLDGSVREGQCNVTTPFQIASSISKRLAEDSLVARVTYVERVDLELCDVEEGEQP 211

Query: 44  -------------NGK-------------VCDLSDPV-REGSIEIITPEDPRSLAVIRHS 76
                         G+             + D+  P+     IE +  E   +     HS
Sbjct: 212 EGEQPQQDQTQQPEGEQPRKAAEPVEAPVLWDMGAPLLGSCKIEFLNVEHEEAKKAFWHS 271

Query: 77  CAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQIEKKMQEIIARDSP 135
            AHI+  +++ ++    + IGP +++GFYYD    +   +++   ++E +  ++I  ++ 
Sbjct: 272 SAHILGSSLEKLFGG-YLTIGPPLKEGFYYDIYLGDFSITNEHYKKVEDEFSKLIKENAE 330

Query: 136 FLKQYLSHEKARELFESKKEAYKVEILE-SIPAKENVTLYRQGEWFDLCRGPHVRSTGQV 194
           F K   + E+  +LF+     +K+E++   IP  +  ++Y+ G + DLC GPH++STG+ 
Sbjct: 331 FEKLICTKEEVMDLFQY--NPFKLELIRTKIPEGKKTSVYKCGNFIDLCLGPHIKSTGKA 388

Query: 195 KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMD 254
           K F K++K + AYW G+ N   L R+YG  +  + EL  YL FLEE++KRDHR + +++ 
Sbjct: 389 KAF-KVLKNSAAYWLGNKNNESLQRVYGITFQKKTELNDYLNFLEEAKKRDHRNVGKKLH 447

Query: 255 LFHIAEDGSG-VIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWD 312
            F   +D S    FW   G KI+  LI ++RR+ +   Y+E+ TP V    LW+ SGH+ 
Sbjct: 448 FFFFDKDTSPGSCFWLPHGAKIYNKLIDFVRREYRIRLYDEVITPNVFSCDLWRTSGHYQ 507

Query: 313 SYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE 372
           +Y+  MF          + + + +KPMNCPGH  +F     SYR LP+RLA+FG ++RNE
Sbjct: 508 NYKDCMFIFNV------EQKEWGMKPMNCPGHCVMFKQLNASYRSLPIRLADFGVLHRNE 561

Query: 373 PSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
            SGSL GL RVR F QDD+H+FCT EQ+  E L   + I  IY  FGF+  +  LSTRP+
Sbjct: 562 ISGSLSGLTRVRRFQQDDSHIFCTFEQIKEEVLGTLHFIFFIYDLFGFKYEL-FLSTRPK 620

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
           K +G+ + WD AE  +K  L++        I   +  G+GAFYGPK + +LKD+I R  Q
Sbjct: 621 KFIGNISTWDFAEQALKDALNSAN------IPWKLNEGDGAFYGPKIDILLKDSINRTHQ 674

Query: 493 CGTIQVDFNLPSRFNAFYVNSH 514
           CGTIQ+DF LP RFN  Y N  
Sbjct: 675 CGTIQLDFQLPCRFNLQYKNRD 696



 Score =  161 bits (408), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 46/126 (36%), Positives = 71/126 (56%), Gaps = 1/126 (0%)

Query: 519 HPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSH 578
            PV+IHRA+ GS+ERF+ I+IE+  G LP W+SP QAIV  ++    +YA  +   L +H
Sbjct: 765 RPVIIHRAILGSVERFVAILIEHTAGKLPFWISPRQAIVLPVSDKFNDYAHYVHQTLNNH 824

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV-SLLDA 637
              +E D    T+N KIRE  + +   I++ G+KE +  ++ +R        +V SL + 
Sbjct: 825 LFDVEIDTSLNTLNKKIREAQLNQFNFILVVGEKELTTNTVTVRNRDDQNNHEVCSLEEL 884

Query: 638 IPILTK 643
           I    K
Sbjct: 885 IARFGK 890


>gi|229583844|ref|YP_002842345.1| threonyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
 gi|259516679|sp|C3N1B5|SYT_SULIA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|228018893|gb|ACP54300.1| threonyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
 gi|323476419|gb|ADX81657.1| threonyl-tRNA synthetase [Sulfolobus islandicus HVE10/4]
          Length = 545

 Score =  411 bits (1057), Expect = e-112,   Method: Composition-based stats.
 Identities = 176/496 (35%), Positives = 285/496 (57%), Gaps = 20/496 (4%)

Query: 161 ILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRI 220
           +L ++P + N  +Y+ G    +       ST    K+F+++ ++  +    +      RI
Sbjct: 59  VLANVPIENNQIVYK-GNKVSIIEDKVSISTNLNPKYFEILNISTHH---PNPNEQYVRI 114

Query: 221 YGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTL 279
            G A+ T+++L  YL +LE++E+ DHR +  ++DLF   E+ GSG++ +H KG  I   L
Sbjct: 115 RGVAFETEEQLKDYLTWLEKAEETDHRLIGEKLDLFSFHEEAGSGLVLFHPKGQTIRNEL 174

Query: 280 ISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKP 338
           I++MR       Y+E+ T  V    +W+ SGH+  YR  +       D       + +KP
Sbjct: 175 IAFMREINDSMGYQEVYTSHVFKTDIWKISGHYTLYRDKLIVFNMEGD------EYGVKP 228

Query: 339 MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE 398
           MNCP H+ ++    ++YR+LP+R +EFG VYR E  G L+GL+RVRGF QDD H+F  ++
Sbjct: 229 MNCPAHILIYKSKPRTYRDLPIRFSEFGHVYRWEKKGELYGLLRVRGFVQDDGHIFLRED 288

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKL--STRPEKRVGSDALWDDAENIMKGVLDTIK 456
           Q+  E   + +  + ++  FGF+   +K   STRP++ +GSD LW+ A N +   L    
Sbjct: 289 QLREEIKMLISKTVEVWHKFGFKDDDIKPYLSTRPDESIGSDELWEKATNALISALQ--- 345

Query: 457 NSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE 516
              +  +  G+   EGAFYGPK ++ ++D++GR WQ  TIQVDFNLP RF   Y++    
Sbjct: 346 ---ESGLKFGIKEKEGAFYGPKIDFEIRDSLGRWWQLSTIQVDFNLPERFKLEYIDKDGI 402

Query: 517 KCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLK 576
           K  PVM+HRA++GSI+RF+ I++E+FKG LP WLS +Q  V  IT    EYA+++ N ++
Sbjct: 403 KKRPVMVHRAIYGSIDRFVAILLEHFKGKLPTWLSSVQVRVLPITDEVNEYAEKVLNDMR 462

Query: 577 SHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
              +  E D+  ET++ +I+    + +P I+I G KEASE ++ +R  G+   + V    
Sbjct: 463 KRRIRAEIDYAGETLSKRIKNAYDQGVPYILIVGKKEASEGTVTVRARGNIEVRNVKFEK 522

Query: 637 AIPILTKESLPPDCQK 652
            + +L  E    D ++
Sbjct: 523 FLELLITEIAQRDVEQ 538


>gi|145529349|ref|XP_001450463.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124418074|emb|CAK83066.1| unnamed protein product [Paramecium tetraurelia]
          Length = 930

 Score =  411 bits (1057), Expect = e-112,   Method: Composition-based stats.
 Identities = 180/550 (32%), Positives = 285/550 (51%), Gaps = 50/550 (9%)

Query: 3   SDIKLTFPDGSIKNFPVH-ATGSDVAESISRSLAKKAVAVAI------------------ 43
           + I +T  DG          T   +A  IS+ LA+  VA  +                  
Sbjct: 58  TPITITLKDGKKIEGKKWVTTPLMIAVGISKKLAESMVAAKVVYDTLFEKNFVDVDHEEQ 117

Query: 44  -----------NGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE 91
                      +  + DL+ P+  +  +E+++ +D     V  HS +HI+  A++ ++  
Sbjct: 118 QSQGSQLNLKPDYVIWDLTRPLEGDCQLELLSFDDNNGKEVFWHSSSHILGSALEEVY-G 176

Query: 92  VQVAIGPIIEDGFYYDFD-KEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELF 150
             + IGP I+ GF+YD    +   + ++  +IEK   ++ A    F +  L+ ++  EL 
Sbjct: 177 CHLCIGPAIDGGFFYDCYIGDYKVTQNDYVKIEKAASDLAASKQEFQRAVLTKDECLEL- 235

Query: 151 ESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWR 209
                 +K +++   IP     T Y+ G   DLC GPH+ +T  VK F    K + AYW 
Sbjct: 236 -FGTNPFKRQLITNKIPEGAMTTAYKCGNLIDLCTGPHLPNTSYVKAFQVT-KNSAAYWL 293

Query: 210 GDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWH 269
           G +    L R+YG ++ +++ L +Y+   +E   RDHR + ++ +L+   +   G  F++
Sbjct: 294 GKNTNDDLQRVYGVSFPSKKLLDEYVKIQKELALRDHRNVGKKQNLYLFHQLSPGSAFFY 353

Query: 270 RKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTI 328
             G  I+ TL++++RR+     Y+E+ +P + +  LW+ SGH+D Y+ N+F +      +
Sbjct: 354 PSGAHIYNTLMNFLRRQYYIRGYQEVISPNIFNAQLWKISGHYDKYKENLFFI-----NM 408

Query: 329 KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQ 388
            +   + LKPMNCPGH  +F+    SYR+LPVR A+FG ++RNE  G+L GL RVR F Q
Sbjct: 409 GEEGEYGLKPMNCPGHCLMFDMIQHSYRDLPVRFADFGVLHRNEVHGALSGLTRVRRFQQ 468

Query: 389 DDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIM 448
           DDAH+FC  +Q+  E     + +  IY  FGFE  +  LSTRPEK +G+  +WD+AE  +
Sbjct: 469 DDAHIFCRMDQIQEEIKSCLDFLSYIYSLFGFEFKL-YLSTRPEKFLGTKEVWDNAEYQL 527

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
           +  L              V  G+GAFYGPK +  L DA  R+ QCGTIQ+DFNLP RFN 
Sbjct: 528 EQGLKKFGKP------FEVNPGDGAFYGPKIDVKLYDAYKREHQCGTIQLDFNLPERFNL 581

Query: 509 FYVNSHSEKC 518
            Y  S   + 
Sbjct: 582 QYRASEDVQE 591



 Score =  121 bits (304), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 43/148 (29%), Positives = 77/148 (52%), Gaps = 7/148 (4%)

Query: 504 SRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSS 563
            ++   Y +  +    PV++HRA+ GS+ER I ++ E   G  P WLSP Q ++  +++ 
Sbjct: 702 KKYELGYHHLKAGFARPVIVHRAILGSLERMIAVLTEQCGGKWPFWLSPKQLVLCPVSAY 761

Query: 564 AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRR 623
             + A++IA  L+    ++ TD  ++T+  K+R   I+    + + G++E     I +R 
Sbjct: 762 YKDVAEKIAARLRLEGYTVTTDEADQTLAKKVRNAQIQYFNFVGVIGEEEVKAGVIDVRD 821

Query: 624 -FGSTTTQKVSLLDAIPILTK--ESLPP 648
              +T   K++    IP L K  ESL P
Sbjct: 822 CEKNTRIGKLT----IPQLCKFFESLKP 845


>gi|227826680|ref|YP_002828459.1| threonyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
 gi|259516736|sp|C3MUC7|SYT_SULIM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|227458475|gb|ACP37161.1| threonyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
          Length = 545

 Score =  411 bits (1057), Expect = e-112,   Method: Composition-based stats.
 Identities = 176/496 (35%), Positives = 285/496 (57%), Gaps = 20/496 (4%)

Query: 161 ILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRI 220
           +L ++P + N  +Y+ G    +       ST    K+F+++ ++  +    +      RI
Sbjct: 59  VLANVPIENNQIVYK-GNKVSIIEDKVSISTNLNPKYFEILNISTHH---PNPNEQYVRI 114

Query: 221 YGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTL 279
            G A+ T+++L  YL +LE++E+ DHR +  ++DLF   E+ GSG++ +H KG  I   L
Sbjct: 115 RGVAFETEEQLKDYLTWLEKAEETDHRLIGEKLDLFSFHEEAGSGLVLFHPKGQTIRNEL 174

Query: 280 ISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKP 338
           I++MR       Y+E+ T  V    +W+ SGH+  YR  +       D       + +KP
Sbjct: 175 IAFMREINDSMGYQEVYTSHVFKTDIWKISGHYTLYRDKLIVFNMEGD------EYGVKP 228

Query: 339 MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE 398
           MNCP H+ ++    ++YR+LP+R +EFG VYR E  G L+GL+RVRGF QDD H+F  ++
Sbjct: 229 MNCPAHILIYKSKPRTYRDLPIRFSEFGHVYRWEKKGELYGLLRVRGFVQDDGHIFLRED 288

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKL--STRPEKRVGSDALWDDAENIMKGVLDTIK 456
           Q+  E   + +  + ++  FGF+   +K   STRP++ +GSD LW+ A N +   L    
Sbjct: 289 QLREEIKMLISKTVEVWHKFGFKDDDIKPYLSTRPDESIGSDELWEKATNALISALQ--- 345

Query: 457 NSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE 516
              +  +  G+   EGAFYGPK ++ ++D++GR WQ  TIQVDFNLP RF   Y++    
Sbjct: 346 ---ESGLKFGIKEKEGAFYGPKIDFEIRDSLGRWWQLSTIQVDFNLPERFKLEYIDKDGI 402

Query: 517 KCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLK 576
           K  PVM+HRA++GSI+RF+ I++E+FKG LP WLS +Q  V  IT    EYA+++ N ++
Sbjct: 403 KKRPVMVHRAIYGSIDRFVAILLEHFKGKLPTWLSSVQVRVLPITDEVNEYAEKVLNDMR 462

Query: 577 SHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
              +  E D+  ET++ +I+    + +P I+I G KEASE ++ +R  G+   + V    
Sbjct: 463 KRRIRAEIDYAGETLSKRIKNAYDQGVPYILIVGKKEASEGTVTVRARGNIEVRNVKFEK 522

Query: 637 AIPILTKESLPPDCQK 652
            + +L  E    D ++
Sbjct: 523 FLELLITEIGQRDVEQ 538


>gi|323473769|gb|ADX84375.1| threonyl-tRNA synthetase [Sulfolobus islandicus REY15A]
          Length = 545

 Score =  411 bits (1055), Expect = e-112,   Method: Composition-based stats.
 Identities = 174/496 (35%), Positives = 279/496 (56%), Gaps = 20/496 (4%)

Query: 161 ILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRI 220
           +L ++P + N  +Y+  +   +     + +    K F  L           +      RI
Sbjct: 59  VLANVPIENNQIVYKGNKVSIIEDKVSISNNLNPKYFEILNIST----HHPNPNEQYVRI 114

Query: 221 YGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTL 279
            G A+ T+++L  YL +LE++E+ DHR +  ++DLF   E+ GSG++ +H KG  I   L
Sbjct: 115 RGVAFETEEQLKDYLTWLEKAEETDHRLIGEKLDLFSFHEEAGSGLVLFHPKGQTIRNEL 174

Query: 280 ISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKP 338
           I++MR       Y+E+ T  V    +W+ SGH+  YR  +       D       + +KP
Sbjct: 175 IAFMREINDSMGYQEVYTSHVFKTDIWKISGHYTLYRDKLIVFNMEGD------EYGVKP 228

Query: 339 MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE 398
           MNCP H+ ++    ++YR+LP+R +EFG VYR E  G L+GL+RVRGF QDD H+F  ++
Sbjct: 229 MNCPAHILIYKSKPRTYRDLPIRFSEFGHVYRWEKKGELYGLLRVRGFVQDDGHIFLRED 288

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKL--STRPEKRVGSDALWDDAENIMKGVLDTIK 456
           Q+  E   + +  + ++  FGF+   +K   STRP++ +GSD LW+ A N +   L    
Sbjct: 289 QLREEIKMLISKTVEVWHKFGFKDDDIKPYLSTRPDESIGSDELWEKATNALISALQ--- 345

Query: 457 NSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE 516
              +  +  G+   EGAFYGPK ++ ++D++GR WQ  TIQVDFNLP RF   Y++    
Sbjct: 346 ---ESGLKFGIKEKEGAFYGPKIDFEIRDSLGRWWQLSTIQVDFNLPERFKLEYIDKDGI 402

Query: 517 KCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLK 576
           K  PVM+HRA++GSI+RF+ I++E+FKG LP WLS +Q  V  IT    EYA+++ N ++
Sbjct: 403 KKRPVMVHRAIYGSIDRFVAILLEHFKGKLPTWLSSVQVRVLPITDEVNEYAEKVLNDMR 462

Query: 577 SHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
              +  E D+  ET++ +I+    + +P I+I G KEASE ++ +R  G+   + V    
Sbjct: 463 KRRIRAEIDYAGETLSKRIKNAYDQGVPYILIVGKKEASEGTVTVRARGNIEVRNVKFEK 522

Query: 637 AIPILTKESLPPDCQK 652
            + +L  E    D ++
Sbjct: 523 FLELLITEIAQRDVEQ 538


>gi|284173635|ref|ZP_06387604.1| threonyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
 gi|261600981|gb|ACX90584.1| threonyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
          Length = 545

 Score =  410 bits (1054), Expect = e-112,   Method: Composition-based stats.
 Identities = 174/496 (35%), Positives = 286/496 (57%), Gaps = 20/496 (4%)

Query: 161 ILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRI 220
           +L ++P + N  +Y+ G    +        T    K+F+++ ++  +    +      RI
Sbjct: 59  VLANVPIENNQVVYK-GNKVSIVEDKVSIPTNLNPKYFEILNISTHH---PNPNEQYVRI 114

Query: 221 YGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTL 279
            G A+ T+++L  YL +LE++E+ DHR +  ++DLF   E+ GSG++ +H KG  +   L
Sbjct: 115 RGVAFETEEQLKDYLTWLEKAEETDHRLIGEKLDLFSFHEEAGSGLVLFHPKGQTLRNEL 174

Query: 280 ISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKP 338
           I++MR       Y+E+ T  VL   +W+ SGH+  YR  +       D       + +KP
Sbjct: 175 ITFMREINDSMGYQEVYTSHVLKTDIWKISGHYTLYRDKLIVFNMEGD------EYGVKP 228

Query: 339 MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE 398
           MNCP H+ ++    ++YR+LP+R +EFG VYR E  G L+GL+RVRGF QDD H+F  ++
Sbjct: 229 MNCPAHILIYKSKPRTYRDLPIRFSEFGHVYRWEKKGELYGLLRVRGFVQDDGHIFLKED 288

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKL--STRPEKRVGSDALWDDAENIMKGVLDTIK 456
           Q+  E   + +  + ++  FGF+   +K   STRP++ +GSD LW+ A N +   L    
Sbjct: 289 QLKEEIKMLISKTVEVWHKFGFKDDDIKPYLSTRPDESIGSDELWEKATNALISALQ--- 345

Query: 457 NSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE 516
              +  +  G+   EGAFYGPK ++ ++D++GR WQ  TIQVDFNLP RF   Y++    
Sbjct: 346 ---ESGLKFGIKEKEGAFYGPKIDFEIRDSLGRWWQLSTIQVDFNLPERFKLEYIDKDGT 402

Query: 517 KCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLK 576
           K  PVM+HRA++GSI+RF+ I++E+FKG LP WLSP+Q  V  IT    EYA+++ N ++
Sbjct: 403 KKRPVMVHRAIYGSIDRFVAILLEHFKGKLPTWLSPVQVKVLPITDEVNEYAEKVLNDMR 462

Query: 577 SHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
              +  E D+  ET++ +I+    + +P I+I G KEAS+ ++ +R  G+   + V    
Sbjct: 463 KRRIRAEIDYAGETLSRRIKNAYDQGVPYILIVGKKEASQGTVTVRARGNIEVRNVKFEK 522

Query: 637 AIPILTKESLPPDCQK 652
            + ++  E    D ++
Sbjct: 523 FLDLMITEITQRDVEQ 538


>gi|227829326|ref|YP_002831105.1| threonyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
 gi|259516733|sp|C3MKT5|SYT_SULIL RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|227455773|gb|ACP34460.1| threonyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
          Length = 545

 Score =  410 bits (1054), Expect = e-112,   Method: Composition-based stats.
 Identities = 175/496 (35%), Positives = 284/496 (57%), Gaps = 20/496 (4%)

Query: 161 ILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRI 220
           +L ++  + N  +Y+ G    +       ST    K+F+++ ++  +    +      RI
Sbjct: 59  VLANVSIENNQIVYK-GNKVSIIEDKVSISTNLNPKYFEILNISTHH---PNPNEQYVRI 114

Query: 221 YGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTL 279
            G A+ T+++L  YL +LE++E+ DHR +  ++DLF   E+ GSG++ +H KG  I   L
Sbjct: 115 RGVAFETEEQLKDYLTWLEKAEETDHRLIGEKLDLFSFHEEAGSGLVLFHPKGQTIRNEL 174

Query: 280 ISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKP 338
           I++MR       Y+E+ T  V    +W+ SGH+  YR  +       D       + +KP
Sbjct: 175 IAFMREINDSMGYQEVYTSHVFKTDIWKISGHYTLYRDKLIVFNMEGD------EYGVKP 228

Query: 339 MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE 398
           MNCP H+ ++    ++YR+LP+R +EFG VYR E  G L+GL+RVRGF QDD H+F  ++
Sbjct: 229 MNCPAHILIYKSKPRTYRDLPIRFSEFGHVYRWEKKGELYGLLRVRGFVQDDGHIFLRED 288

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKL--STRPEKRVGSDALWDDAENIMKGVLDTIK 456
           Q+  E   + +  + ++  FGF+   +K   STRP++ +GSD LW+ A N +   L    
Sbjct: 289 QLREEIKMLISKTVEVWHKFGFKDDDIKPYLSTRPDESIGSDELWEKATNALISALQ--- 345

Query: 457 NSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE 516
              +  +  G+   EGAFYGPK ++ ++D++GR WQ  TIQVDFNLP RF   Y++    
Sbjct: 346 ---ESGLKFGIKEKEGAFYGPKIDFEIRDSLGRWWQLSTIQVDFNLPERFKLEYIDKDGI 402

Query: 517 KCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLK 576
           K  PVM+HRA++GSI+RF+ I++E+FKG LP WLS +Q  V  IT    EYA+++ N ++
Sbjct: 403 KKRPVMVHRAIYGSIDRFVAILLEHFKGKLPTWLSSVQVRVLPITDEVNEYAEKVLNDMR 462

Query: 577 SHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
              +  E D+  ET++ +I+    + +P I+I G KEASE ++ +R  G+   + V    
Sbjct: 463 KRRIRAEIDYAGETLSKRIKNAYDQGVPYILIVGKKEASEGTVTVRARGNIEVRNVKFEK 522

Query: 637 AIPILTKESLPPDCQK 652
            + +L  E    D ++
Sbjct: 523 FLELLITEIAQRDVEQ 538


>gi|15899227|ref|NP_343832.1| threonyl-tRNA synthetase [Sulfolobus solfataricus P2]
 gi|229578099|ref|YP_002836497.1| threonyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
 gi|229583311|ref|YP_002841710.1| threonyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
 gi|22654132|sp|Q97VW8|SYT_SULSO RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|259516740|sp|C3NMY1|SYT_SULIN RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|259516744|sp|C3N9B3|SYT_SULIY RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|13815789|gb|AAK42622.1| Threonyl-tRNA synthetase (thrS) [Sulfolobus solfataricus P2]
 gi|228008813|gb|ACP44575.1| threonyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
 gi|228014027|gb|ACP49788.1| threonyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
          Length = 545

 Score =  410 bits (1054), Expect = e-112,   Method: Composition-based stats.
 Identities = 175/496 (35%), Positives = 284/496 (57%), Gaps = 20/496 (4%)

Query: 161 ILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRI 220
           +L ++  + N  +Y+ G    +       ST    K+F+++ ++  +    +      RI
Sbjct: 59  VLANVSIENNQIVYK-GNKVSIIEDKVSISTNLNPKYFEILNISTHH---PNPNEQYVRI 114

Query: 221 YGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTL 279
            G A+ T+++L  YL +LE++E+ DHR +  ++DLF   E+ GSG++ +H KG  I   L
Sbjct: 115 RGVAFETEEQLKDYLSWLEKAEETDHRLIGEKLDLFSFHEEAGSGLVLFHPKGQTIRNEL 174

Query: 280 ISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKP 338
           I++MR       Y+E+ T  V    +W+ SGH+  YR  +       D       + +KP
Sbjct: 175 IAFMREINDSMGYQEVYTSHVFKTDIWKISGHYTLYRDKLIVFNMEGD------EYGVKP 228

Query: 339 MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE 398
           MNCP H+ ++    ++YR+LP+R +EFG VYR E  G L+GL+RVRGF QDD H+F  ++
Sbjct: 229 MNCPAHILIYKSKPRTYRDLPIRFSEFGHVYRWEKKGELYGLLRVRGFVQDDGHIFLRED 288

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKL--STRPEKRVGSDALWDDAENIMKGVLDTIK 456
           Q+  E   + +  + ++  FGF+   +K   STRP++ +GSD LW+ A N +   L    
Sbjct: 289 QLREEIKMLISKTVEVWHKFGFKDDDIKPYLSTRPDESIGSDELWEKATNALISALQ--- 345

Query: 457 NSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE 516
              +  +  G+   EGAFYGPK ++ ++D++GR WQ  TIQVDFNLP RF   Y++    
Sbjct: 346 ---ESGLKFGIKEKEGAFYGPKIDFEIRDSLGRWWQLSTIQVDFNLPERFKLEYIDKDGI 402

Query: 517 KCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLK 576
           K  PVM+HRA++GSI+RF+ I++E+FKG LP WLS +Q  V  IT    EYA+++ N ++
Sbjct: 403 KKRPVMVHRAIYGSIDRFVAILLEHFKGKLPTWLSSVQVRVLPITDEVNEYAEKVLNDMR 462

Query: 577 SHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
              +  E D+  ET++ +I+    + +P I+I G KEASE ++ +R  G+   + V    
Sbjct: 463 KRRIRAEIDYAGETLSKRIKNAYDQGVPYILIVGKKEASEGTVTVRARGNIEVRNVKFEK 522

Query: 637 AIPILTKESLPPDCQK 652
            + +L  E    D ++
Sbjct: 523 FLELLITEIAQRDVEQ 538


>gi|284996685|ref|YP_003418452.1| threonyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5]
 gi|284444580|gb|ADB86082.1| threonyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5]
          Length = 545

 Score =  409 bits (1050), Expect = e-111,   Method: Composition-based stats.
 Identities = 175/496 (35%), Positives = 284/496 (57%), Gaps = 20/496 (4%)

Query: 161 ILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRI 220
           +L ++  + N  +Y+ G    +       ST    K+F+++ ++  +    +      RI
Sbjct: 59  VLANVSIENNQIVYK-GNKVSIIEDKVSISTNLNPKYFEILNISTHH---PNPNEQYVRI 114

Query: 221 YGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTL 279
            G A+ T+++L  YL +LE++E+ DHR +  ++DLF   E+ GSG++ +H KG  I   L
Sbjct: 115 RGVAFETEEQLKDYLTWLEKAEETDHRLIGEKLDLFSFHEEAGSGLVLFHPKGQTIRNEL 174

Query: 280 ISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKP 338
           I++MR       Y+E+ T  V    +W+ SGH+  YR  +       D       + +KP
Sbjct: 175 IAFMREINDSMGYQEVYTSHVFKTDIWKISGHYTLYRDKLIVFNMEGD------EYGVKP 228

Query: 339 MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE 398
           MNCP H+ ++    ++YR+LP+R +EFG VYR E  G L+GL+RVRGF QDD H+F  ++
Sbjct: 229 MNCPAHILIYKSKPRTYRDLPIRFSEFGHVYRWEKKGELYGLLRVRGFVQDDGHIFLRED 288

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKL--STRPEKRVGSDALWDDAENIMKGVLDTIK 456
           Q+  E   + +  + ++  FGF+   +K   STRP++ +GSD LW+ A N +   L    
Sbjct: 289 QLREEIKMLISKTVEVWHKFGFKDDDIKPYLSTRPDESIGSDELWEKATNALISALQ--- 345

Query: 457 NSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE 516
              +  +  G+   EGAFYGPK ++ ++D++GR WQ  TIQVDFNLP RF   Y++    
Sbjct: 346 ---ESGLKFGIKEKEGAFYGPKIDFEIRDSLGRWWQLSTIQVDFNLPERFKLEYIDKDGI 402

Query: 517 KCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLK 576
           K  PVM+HRA++GSI+RF+ I++E+FKG LP WLS +Q  V  IT    EYA+++ N ++
Sbjct: 403 KKRPVMVHRAIYGSIDRFVAIILEHFKGKLPTWLSSVQVRVLPITDEVNEYAEKVLNDMR 462

Query: 577 SHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
              +  E D+  ET++ +I+    + +P I+I G KEASE ++ +R  G+   + V    
Sbjct: 463 KRRIRAEIDYAGETLSKRIKNAYDQGVPYILIVGKKEASEGTVTVRARGNIEVRNVKFEK 522

Query: 637 AIPILTKESLPPDCQK 652
            + +L  E    D ++
Sbjct: 523 FLELLITEIAQRDVEQ 538


>gi|332797162|ref|YP_004458662.1| threonyl-tRNA synthetase [Acidianus hospitalis W1]
 gi|332694897|gb|AEE94364.1| threonyl-tRNA synthetase [Acidianus hospitalis W1]
          Length = 542

 Score =  408 bits (1047), Expect = e-111,   Method: Composition-based stats.
 Identities = 181/514 (35%), Positives = 280/514 (54%), Gaps = 31/514 (6%)

Query: 141 LSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKL 200
           +S  +A++  +      K+E  ++      V+L              V  +G  K F   
Sbjct: 46  MSLAEAKKYAKEGNYEIKIEGKKARAGNYEVSLES-----------DVTPSGNPKYF--- 91

Query: 201 MKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAE 260
            ++        +      RI G A+ T+++L  Y+ +LE++ + DHR L  +MDLF   E
Sbjct: 92  -EILNISVHHPTPDKQYVRIRGVAFETEEQLKDYMNWLEKASETDHRILGEKMDLFSFPE 150

Query: 261 D-GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANM 318
           + G G++ +H KG  I   LI YM+       Y+E+ T  V    LW+ SGH++ Y+  M
Sbjct: 151 EAGPGLVLYHPKGQIIRNELIDYMKEINASMGYQEVYTTHVYRTILWKISGHYEMYKDKM 210

Query: 319 FAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLH 378
                      D     +KPMNCP H+ ++    +SY++LP+R +EFG+VYR E  G L+
Sbjct: 211 LIFTH------DDEELGIKPMNCPAHILIYKSRTRSYKDLPIRFSEFGNVYRWEQKGELY 264

Query: 379 GLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF--EKIMVKLSTRPEKRVG 436
           GL+RVRGFTQDD HVF  ++Q+ NE   + +  + +   FGF  + + + LSTRP++ +G
Sbjct: 265 GLLRVRGFTQDDGHVFLREDQLENEVKMLISKTLEVLAKFGFKGDDVRINLSTRPDESIG 324

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
           +D  W+ A N +   L ++       +   V   EGAFYGPK ++ ++D++GR WQ  TI
Sbjct: 325 TDEQWEKATNALVNALRSLN------LKYQVKEKEGAFYGPKIDFDIRDSLGRWWQLSTI 378

Query: 497 QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI 556
           QVDFNLP RF   YV+    K  PVM+HRA++GSI+RF+ I++E+FKG LP WLSPIQ  
Sbjct: 379 QVDFNLPERFKLEYVDKDGSKKRPVMVHRAIYGSIDRFLAILLEHFKGKLPTWLSPIQVR 438

Query: 557 VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASE 616
           +  I     EYA+++ + L S  +  E D   ET++ +I++     +P I+I G KEA  
Sbjct: 439 ILPINPEVREYAEKVLSKLVSVKIRAEIDSEEETLSKRIKKAYDDGVPYILIIGKKEAES 498

Query: 617 RSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDC 650
            S+ IR  G+   + V L   +  ++KE    D 
Sbjct: 499 NSVTIRARGNIEVKGVPLDKCVDAISKEIQNRDL 532


>gi|224613500|gb|ACN60329.1| Threonyl-tRNA synthetase, cytoplasmic [Salmo salar]
          Length = 383

 Score =  407 bits (1045), Expect = e-111,   Method: Composition-based stats.
 Identities = 153/383 (39%), Positives = 215/383 (56%), Gaps = 15/383 (3%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
             G  F+  KG  I+ TL  +++ + +   + E+ TP +    LW++SGHW+ Y  NMF 
Sbjct: 2   SPGSCFFLPKGAHIYNTLADFIKTEYRRRGFHEVVTPTLYSTALWERSGHWEHYSENMFT 61

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           V        D  T+ALKPMNCP H  +F   ++S+RELP+R A+FG+++RNE SG+L GL
Sbjct: 62  VT------GDTHTYALKPMNCPAHCLMFEQRVRSWRELPLRWADFGALHRNELSGALGGL 115

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            RVR F QDDAH+FCT EQ+  E +   + + S+Y+ FGF      LSTRP   +G  AL
Sbjct: 116 TRVRRFCQDDAHIFCTPEQLEEEIMACLDFVRSVYRVFGF-SFHCLLSTRPTPCLGEHAL 174

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDF 500
           WD AE  ++  L       Q      +  G+GAFYGPK +  +KDAIGR  QC TIQ+DF
Sbjct: 175 WDHAEQQLERSLQQFGERWQ------LNPGDGAFYGPKIDIQIKDAIGRQHQCATIQLDF 228

Query: 501 NLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTI 560
            LP RF+  YV    E   PVM+HRAV GS+ER I I+ ENF G  PLWLSP Q I+  +
Sbjct: 229 QLPIRFDLQYVGGDGETHRPVMVHRAVLGSLERMIAILAENFGGKWPLWLSPAQVIIIPV 288

Query: 561 TSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSI 619
              +  YAQ++    +      + D     T+N KIR   + +   I + G+KE    ++
Sbjct: 289 GGGSETYAQQVVRQFREAGFMADVDDDQGATLNKKIRSAQLAQYNYIFVVGEKECESGTV 348

Query: 620 GIRRFGSTTTQKVSLLDAIPILT 642
            +R  G     +    + +  L+
Sbjct: 349 SVRTRGGKQLGRRPTEEVLASLS 371


>gi|89101224|ref|ZP_01174050.1| threonyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
 gi|89084053|gb|EAR63228.1| threonyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
          Length = 408

 Score =  406 bits (1043), Expect = e-111,   Method: Composition-based stats.
 Identities = 150/418 (35%), Positives = 249/418 (59%), Gaps = 18/418 (4%)

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRRKIKD-DYEE 293
             LEE+++RDHRK+ +E+DLF  ++    G+  W  KG  I + +  Y+  K +   YE 
Sbjct: 1   RLLEEAKERDHRKIGKELDLFMTSQKVGQGLPMWLPKGATIRRIVERYIVDKEQRLGYEH 60

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           + TP + +  L++ SGHWD Y+ +MF V   D+         L+PMNCP H+ ++ + + 
Sbjct: 61  VYTPVMANVELYKTSGHWDHYQEDMFPVMEMDN-----EELVLRPMNCPHHMMIYKNSIH 115

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYRELP+R+AE G+++R E SG+L GL RVRG T +DAH+F   +Q+  E  ++ +LI+ 
Sbjct: 116 SYRELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEEFKRVVHLILE 175

Query: 414 IYKDFGFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL 469
           +YKDF  E    +LS R  +        D +W+ A++++K  +D +       ++     
Sbjct: 176 VYKDFNIEDYSFRLSYRDPQDTEKYFNDDEMWEKAQSMLKEAMDELG------LDYYEAE 229

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG 529
           GE AFYGPK + ++K A+G++    T Q+DF LP RF+  YV    ++  PV+IHR V  
Sbjct: 230 GEAAFYGPKLDVMVKTALGKEETLSTAQLDFLLPERFDLSYVGEDGKQHRPVVIHRGVVS 289

Query: 530 SIERFIGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRN 588
           ++ERF+  +IE +KG  P WL+P+Q  V  ++     +YA+++   L++    +E D RN
Sbjct: 290 TMERFVAFLIEEYKGAFPTWLAPVQVQVIPVSPDAHFDYAKKVQEELQAQGYRVELDARN 349

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           E I YKIRE  ++KIP +++ GDKE S+ ++ +R++G   ++ +S       L ++++
Sbjct: 350 EKIGYKIREAQMQKIPYMLVLGDKEVSDNAVNVRKYGEQKSETMSFDVFKDALKEDTV 407


>gi|290981498|ref|XP_002673467.1| predicted protein [Naegleria gruberi]
 gi|284087051|gb|EFC40723.1| predicted protein [Naegleria gruberi]
          Length = 670

 Score =  406 bits (1042), Expect = e-111,   Method: Composition-based stats.
 Identities = 159/653 (24%), Positives = 294/653 (45%), Gaps = 33/653 (5%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
            +I +T     +K      +   +A  +S   +   +   INGK+ D++  +  +G +E 
Sbjct: 29  KEITITIDKDVVKGKAFETSPYKIASDLSNDQSMDHLIAKINGKLWDMNRELEGDGRLEF 88

Query: 62  I-TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIED-----GFYYDFDKEQP-- 113
                D     V + S A ++  AV+ ++ +  V+ G ++ED     GF+Y+   ++   
Sbjct: 89  CSDWNDLEVRRVFKRSSAFVLGAAVEQVF-KCLVSGGAVLEDDYGKGGFFYENFMDEVVR 147

Query: 114 -FSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENV 171
             S ++ ++I+K++++II    PF +  +   +A EL       +K+E+L E     + +
Sbjct: 148 NSSINDHSKIKKEIEKIIEEKHPFERLIVRKYEALEL--FAGNKFKIELLNEKFKDDDFL 205

Query: 172 TLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQEL 231
            +YR G + D   GPH+  TGQ+  F    ++          +  + R YG ++ T Q  
Sbjct: 206 CVYRCGCFIDTSVGPHLLHTGQIASF----EIISNTRFLSDTKREILRFYGISFPTVQLK 261

Query: 232 TQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-D 290
            ++    ++ +  DH+K+ ++ +L+       G++     G +I  ++ S +R       
Sbjct: 262 EEWKIMTQKLKLCDHKKVGKDQELWFFHPHAPGMVSLLPHGKRICNSVQSQLREAYWRYG 321

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH 350
           + E+ +P VL++ LW    ++ S   N +  +       D   + LKP N P H  ++ +
Sbjct: 322 FAEVQSPIVLNKDLW----YYQSGSRNQWWQQYNFALEIDKEYYILKPYNKPIHCIMYRN 377

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
             +SYR+LP+R  EFGSV+ +          R+R F +D++ +FC  +Q   E L    +
Sbjct: 378 KSRSYRDLPIRYVEFGSVFPDNIKP-FRLNGRLRSFQKDESTIFCQSDQTKKEVLNCLQM 436

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
           + S+Y  FGFE   +  ST+P    G +  W   E I++  L ++ +            G
Sbjct: 437 MGSVYNKFGFE-FKIVFSTKPVSFYGDNLEWIKLEGILETALKSLGH------EWERDEG 489

Query: 471 EGAFYGPKFEYILKDAIGRDWQ-CGTIQVDFNLPSRFNAFYVNSHSE-KCHPVMIHRAVF 528
                GP+ E+ + D + R    CG IQ+D   P  FN  Y +S +  +  P+ I   + 
Sbjct: 490 GAPSLGPRIEFYVSDNLKRFIYLCGIIQMDLMTPRFFNLTYTSSDNSAESKPICISSTIL 549

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRN 588
            + E F+ +  E + G  P WLSP QAI+  I     EYA  + + +      ++ D   
Sbjct: 550 NNTETFMALSAERYGGKWPFWLSPRQAIIIPICEKCSEYANNVKDRIHQAGYYVDVDMSF 609

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            TI  KIR   + +   I+I G  E     + +R          S+ + +   
Sbjct: 610 HTIEKKIRNAHLAQYNYILIIGVSEMETDCVNVRIRDGEQEGVKSIQELLEEF 662


>gi|167422088|ref|ZP_02313841.1| threonyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|166958900|gb|EDR55921.1| threonyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
          Length = 369

 Score =  406 bits (1042), Expect = e-111,   Method: Composition-based stats.
 Identities = 174/370 (47%), Positives = 250/370 (67%), Gaps = 13/370 (3%)

Query: 276 FQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           F+ L +++R K+K+  Y+E+  P ++D+ LW+++GHW++Y  +MF       T  + R +
Sbjct: 1   FRELETFVRMKLKEYQYQEVKGPFMMDRVLWEKTGHWENYAEHMFT------TSSENREY 54

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
            +KPMNCPGHV +FN GLKSYR+LP+R+AEFGS +RNEPSG+LHGLMRVRGFTQDDAHVF
Sbjct: 55  CIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHVF 114

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDT 454
           CT+EQ+ +E      ++  +Y  FGFEKI+VKLSTRPEKR+GSD LW  AE+ +   L  
Sbjct: 115 CTEEQVRDEVNSCIKMVYDMYSTFGFEKIVVKLSTRPEKRIGSDELWTRAEDDLAAAL-- 172

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH 514
               +++ I      GEGAFYGPK E+ L D + R WQCGT+Q+DF+LP R +A Y+  +
Sbjct: 173 ----TENGIPFDYQPGEGAFYGPKIEFTLHDCLDRAWQCGTVQLDFSLPGRLSASYIGEN 228

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANL 574
           +++  PVMIHRA+ GS+ERFIGI+ E + G  P WL+P+Q +V  IT S  +Y Q++   
Sbjct: 229 NDRQVPVMIHRAILGSMERFIGILTEEYAGFFPTWLAPVQVVVMNITDSQSDYVQQVTKK 288

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           L+   +  + D RNE I +KIREH+++++P +++CGDKE     I +R         + +
Sbjct: 289 LQDAGIRAKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKIAVRTRRGKDLGSLDV 348

Query: 635 LDAIPILTKE 644
              +  L  E
Sbjct: 349 NVVVDQLLAE 358


>gi|15921207|ref|NP_376876.1| threonyl-tRNA synthetase [Sulfolobus tokodaii str. 7]
 gi|22654128|sp|Q973C8|SYT_SULTO RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|15621992|dbj|BAB65985.1| 540aa long hypothetical threonyl-tRNA synthetase [Sulfolobus
           tokodaii str. 7]
          Length = 540

 Score =  404 bits (1037), Expect = e-110,   Method: Composition-based stats.
 Identities = 169/484 (34%), Positives = 269/484 (55%), Gaps = 17/484 (3%)

Query: 174 YRQGEWFDLCRGPHVRSTGQVKKF-FKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELT 232
           Y+  + +    G  ++  G+      K  ++        S      RI G  +  ++EL 
Sbjct: 62  YQLKDGYIEFNGNKIKVLGEPSSLEPKYFEILNISVHHPSPNVQYVRIRGVGFEKKEELD 121

Query: 233 QYLYFLEESEKRDHRKLAREMDLFHIAEDG-SGVIFWHRKGWKIFQTLISYMRRKIKD-D 290
           QYL +LEE  + DHR +   +DLF   ++   G+  +H KG  I + L+ +M    +   
Sbjct: 122 QYLKWLEEVSEYDHRIIGERLDLFSFPDETAPGLALFHYKGQIIRKELMKFMEEINESMG 181

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH 350
           Y+E+ T ++    LW+ SGH+D Y+  M   K  D+         LKPMNCP H+ ++  
Sbjct: 182 YQEVFTAEIYRSILWKTSGHYDYYKDKMVLFKMEDE------ELGLKPMNCPAHILIYKS 235

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
             +SY++LP+R +EFG V+R E  G L+GL+RVRGF QDD H+F T++Q+ +E   +   
Sbjct: 236 KTRSYKDLPIRFSEFGLVFRWEKRGELYGLLRVRGFVQDDGHIFLTEDQIKDEVKMLVKK 295

Query: 411 IISIYKDFGF--EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
            I +   FGF  + + + LSTRP++ +GSD LW+ A N +   L+ +       I   V 
Sbjct: 296 TIDVLSIFGFKGDDVRINLSTRPDESIGSDELWEKATNALVSALNELG------IKYIVK 349

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
             EGAFYGPK ++ ++D++GR WQ  TIQVDFNLP RF   Y++    +  PVMIHRA++
Sbjct: 350 EKEGAFYGPKIDFDIRDSLGRWWQLSTIQVDFNLPERFKLEYIDKDGSRKRPVMIHRAIY 409

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRN 588
           GSIERF+ I++E+F+G LP WLSP+Q  +  I+    +YA  + + LK + + +E D  +
Sbjct: 410 GSIERFMAILLEHFRGKLPTWLSPVQVRILPISKDVEDYALNLLSKLKENKIRVELDMSD 469

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
           ET++ +I++   + +P +II G KE  E  + +R   +   + V   D +  L +E    
Sbjct: 470 ETLSKRIKKAYDEGVPYMIIVGKKEREEGKVTVRGRNNVEIRGVKFDDFLKALLEEIRNR 529

Query: 649 DCQK 652
           D  +
Sbjct: 530 DLNQ 533


>gi|146304348|ref|YP_001191664.1| threonyl-tRNA synthetase [Metallosphaera sedula DSM 5348]
 gi|172046910|sp|A4YH38|SYT_METS5 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|145702598|gb|ABP95740.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Metallosphaera
           sedula DSM 5348]
          Length = 541

 Score =  403 bits (1036), Expect = e-110,   Method: Composition-based stats.
 Identities = 171/455 (37%), Positives = 260/455 (57%), Gaps = 16/455 (3%)

Query: 201 MKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAE 260
            KV        S    L RI G A+ T++++  YL +LE++ + DHR +   MDLF   E
Sbjct: 91  FKVLNISVHHPSANVQLVRIRGIAFETKEQMDDYLQWLEKASETDHRIIGERMDLFSFHE 150

Query: 261 DG-SGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANM 318
           +   G++ +H KG  I   +I+YMR       Y+E+ T  V    LW+ SGH+D+YR  M
Sbjct: 151 ESGPGLVLFHPKGQLIRNEMINYMREINASMGYQEVYTSHVFRTVLWKISGHYDTYRDKM 210

Query: 319 FAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLH 378
              +  DD         +KPMNCP H+ ++   ++SYR+LP+R +EFG+VYR E  G L+
Sbjct: 211 LIFQKDDD------ELGIKPMNCPAHILIYKSRVRSYRDLPIRFSEFGNVYRWEKKGELY 264

Query: 379 GLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF--EKIMVKLSTRPEKRVG 436
           GL+R RGFTQDD H+F  ++Q+ +E   +    + +   FGF  E + + LSTRP++ +G
Sbjct: 265 GLLRTRGFTQDDGHIFLREDQLKDEVKNLVRKTLDVLGKFGFKGEDVRINLSTRPDESIG 324

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
           SD  W+ A   +  VL  +       +   V   EGAFYGPK ++ ++D++ R WQ  TI
Sbjct: 325 SDEQWEKATKALLDVLKELN------VPYVVKEKEGAFYGPKIDFDIRDSLNRWWQLSTI 378

Query: 497 QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI 556
           QVDFNLP RF   YV+    K  PVM+HRA++GS++R I I++E+F+G LP WLSP+Q  
Sbjct: 379 QVDFNLPERFKLEYVDEDGSKKRPVMVHRAIYGSLDRMIAILLEHFRGKLPTWLSPVQVR 438

Query: 557 VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASE 616
           V  I+   ++YA+ + ++L    +  E D   ET++ +I+      +P ++I G KEASE
Sbjct: 439 VLPISEDNLDYAKRVMDVLVQRGIRTEIDPSGETLSKRIKRGYDDGVPYLVIVGRKEASE 498

Query: 617 RSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
             + IR  G+   + V L   +  L+ E    D +
Sbjct: 499 EKVTIRARGNVEIKGVPLSRFVDELSLEIGNRDAE 533


>gi|167465772|ref|ZP_02330861.1| threonine-tRNA ligase [Paenibacillus larvae subsp. larvae
           BRL-230010]
          Length = 419

 Score =  403 bits (1035), Expect = e-110,   Method: Composition-based stats.
 Identities = 148/419 (35%), Positives = 239/419 (57%), Gaps = 17/419 (4%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKD 289
            ++L+ LEE++KRDHRKL +++ +F  + +   G+  W   G  I +TL  Y+   + K 
Sbjct: 1   EEHLHLLEEAKKRDHRKLGKDLKIFSFSREVGQGLPLWLPNGATIRRTLERYIVDLEEKL 60

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
            Y+ + TP + +  L++ SGHW+ YR +MF     D+         L+PMNCP H+ V+ 
Sbjct: 61  GYQHVYTPVLANVDLYKTSGHWEHYREDMFPPMQLDN-----EELVLRPMNCPHHMMVYK 115

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
           + L SYR+LP+R+AE G+++R E SG+L GL RVR  T +DAH+FC  +Q+  E  ++  
Sbjct: 116 NELHSYRDLPIRIAELGTMHRYEMSGALTGLHRVRAMTLNDAHIFCRPDQIKEEFARVIT 175

Query: 410 LIISIYKDFGFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
           LI  +Y DFG      +LS R  +       +D +W+ ++ ++K V++ +      R+  
Sbjct: 176 LIRQVYADFGITDYRFRLSYRDPQDTDKYFPNDEMWEMSQRMLKEVVEEL------RLPY 229

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
               GE AFYGPK +  +K A+ ++    T Q+DF LP RF   YV    +K  PV+IHR
Sbjct: 230 YEAEGEAAFYGPKLDVQIKTALKKEETLSTAQLDFLLPERFELEYVGEDGQKHRPVVIHR 289

Query: 526 AVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD 585
            +  ++ER    ++ENF G LP WL P+QA +  ++S+  +YA+E+ + LK   + +  D
Sbjct: 290 GIVSTMERMTAFLLENFAGALPTWLCPVQAKILPVSSAFNDYAKEMEDRLKQAGIRVAAD 349

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            RNE + YKIRE  ++K+P +++ G+ E    S  +RR G       S    I ++ +E
Sbjct: 350 LRNEKLGYKIRESQLEKVPFMLVVGENEKQSGSFSVRRRGEGDLGVHSADALIQMIREE 408


>gi|209969467|dbj|BAG80638.1| hypothetic protein [Streptococcus parauberis]
          Length = 395

 Score =  403 bits (1034), Expect = e-110,   Method: Composition-based stats.
 Identities = 146/395 (36%), Positives = 222/395 (56%), Gaps = 16/395 (4%)

Query: 256 FHIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSY 314
               E G G+ FW   G  I +TL  Y+  +++   Y+ + TP +    L++ SGHW+ Y
Sbjct: 1   MISQEVGQGLPFWLPNGATIRRTLERYITDKELASGYQHVYTPPMASVELYKTSGHWEHY 60

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
           + +MF          D   F L+PMNCP H+ V+ + + SYRELP+R+AE G ++R E S
Sbjct: 61  QEDMFPTMDMG----DGEEFVLRPMNCPHHIQVYKNHVHSYRELPIRIAELGMMHRYEKS 116

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP--- 431
           G+L GL RVR  T +D H+F T EQ+  E  +   LII +Y+DF       +LS R    
Sbjct: 117 GALSGLQRVREMTLNDGHLFVTPEQIQEEFQRALQLIIDVYEDFNLTDYRFRLSYRDPKD 176

Query: 432 -EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRD 490
             K   +D +W++A+ ++K  LD +       ++     GE AFYGPK +  +K A+G +
Sbjct: 177 THKYYDNDEMWENAQAMLKAALDEMG------VDYFEAEGEAAFYGPKLDIQVKTALGNE 230

Query: 491 WQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL 550
               TIQ+DF LP RF+  Y+ +  E+  PVMIHR V  ++ERF  I+IE +KG  P WL
Sbjct: 231 ETLSTIQLDFLLPERFDLKYIGADGEEHRPVMIHRGVISTMERFTAILIETYKGAFPTWL 290

Query: 551 SPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIIC 609
           +P Q  V  I++   ++YA E+A  L+   +  + D RNE + YKIR     KIP  +I 
Sbjct: 291 APHQVTVIPISNEAHIDYAWEVAKTLRDRGIRADVDDRNEKMQYKIRASQTSKIPYQLIV 350

Query: 610 GDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           GDKE  ++++ +RR+GS  T   S+ + +  +  +
Sbjct: 351 GDKEMEDKAVNVRRYGSKATHTESIEEFVDNILAD 385


>gi|329577159|gb|EGG58629.1| threonine--tRNA ligase [Enterococcus faecalis TX1467]
          Length = 412

 Score =  401 bits (1031), Expect = e-109,   Method: Composition-based stats.
 Identities = 155/416 (37%), Positives = 238/416 (57%), Gaps = 18/416 (4%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEI 294
             EE+++RDHRKL +E+DLF ++++ GSG+ FW  KG  I +T+  Y+  ++I   Y+ +
Sbjct: 1   MREEAKERDHRKLGKELDLFMVSQEVGSGLPFWLPKGATIRRTIERYIVDKEISLGYQHV 60

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
            TP + D  L++ SGHWD Y  +MF          D     L+PMNCP H+ V+ + + S
Sbjct: 61  YTPIMADVELYKTSGHWDHYHEDMFPPMDMG----DGEMLVLRPMNCPHHMMVYKNDIHS 116

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YRELP+R+AE G ++R E SG+L GL RVR  T +D H F   +Q+ +E  +   L++++
Sbjct: 117 YRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVAV 176

Query: 415 YKDFGFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
           Y DF       +LS R           DA+W+ A+ ++K  +D ++      ++     G
Sbjct: 177 YADFNITDYRFRLSYRDPNNTDKYFDDDAMWEKAQAMLKAAMDELE------LDYFEAEG 230

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK-CHPVMIHRAVFG 529
           E AFYGPK +  +K A+G +    TIQ+DF LP RF+  YV    E    PV+IHR +  
Sbjct: 231 EAAFYGPKLDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVS 290

Query: 530 SIERFIGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRN 588
           ++ERF+  + E +KG  P WL+PIQA +  ++  +  EYA EI   L++  L +E D RN
Sbjct: 291 TMERFVAYLTEVYKGAFPTWLAPIQATIIPVSVEAHSEYAYEIKERLQAQGLRVEVDDRN 350

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           E + YKIR    +K+P  ++ GDKE  + ++ +RR+GS  T    L   I  +  E
Sbjct: 351 EKMGYKIRASQTQKVPYQLVVGDKEMEDATVNVRRYGSKETSVEDLSIFIDSMAAE 406


>gi|302788105|ref|XP_002975822.1| hypothetical protein SELMODRAFT_267898 [Selaginella moellendorffii]
 gi|300156823|gb|EFJ23451.1| hypothetical protein SELMODRAFT_267898 [Selaginella moellendorffii]
          Length = 420

 Score =  398 bits (1022), Expect = e-108,   Method: Composition-based stats.
 Identities = 171/428 (39%), Positives = 259/428 (60%), Gaps = 20/428 (4%)

Query: 216 MLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWK 274
           ML RIYGTAW T+++L  Y    EE+++RDHR+L +++++F I ED G G++FWH KG  
Sbjct: 1   MLQRIYGTAWQTEEQLKAYQTQKEEAKRRDHRRLGQDLEIFSIQEDAGGGLVFWHPKGAL 60

Query: 275 IFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           I   +  Y ++  ++  YE + TP +    LW++SGH D Y+ NMF     +    +   
Sbjct: 61  IRHLIEDYWKKVHLRRGYELLYTPHIAKAELWKRSGHLDFYKENMF-----EQIKIEEEF 115

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
           + L+PMNCP H+ ++   ++SYRELP++ AE G+VYR E SG+LHGL R      DDAH+
Sbjct: 116 YQLRPMNCPFHIQIYKDRVRSYRELPIKFAELGTVYRYELSGALHGLFR------DDAHI 169

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
           FC  EQ+  E   + +L   I   FGF+   + LST+PEK VGSD +W  A   +K  + 
Sbjct: 170 FCLPEQIRGEIKSVLDLTEEILSQFGFQNYEINLSTKPEKAVGSDDIWHKATEALKDAI- 228

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS 513
                S      G+  G GAFYGPK +  ++DAIGR WQC TIQVDFNLP RF+  YV+ 
Sbjct: 229 -----SDKGWTYGIDEGGGAFYGPKIDLKIEDAIGRKWQCSTIQVDFNLPERFDLTYVDP 283

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIAN 573
              +  P+MIHRA+FGSIERF+GI+IE++ G+ PLW++P+QA +  +T + + Y +++  
Sbjct: 284 SQARKQPIMIHRAIFGSIERFVGILIESYAGDFPLWIAPVQARLLPVTDTELPYCKQVLA 343

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            L+   +  E     E ++  IR   ++KIP++ + G KE   +++ +R         +S
Sbjct: 344 RLREKDIRAEI-ACGERLSKLIRNAEVQKIPLMAVVGPKEVEAQTLTVRTRHGGELGTLS 402

Query: 634 LLDAIPIL 641
           + + I  +
Sbjct: 403 VDEVIDRI 410


>gi|330834508|ref|YP_004409236.1| threonyl-tRNA synthetase [Metallosphaera cuprina Ar-4]
 gi|329566647|gb|AEB94752.1| threonyl-tRNA synthetase [Metallosphaera cuprina Ar-4]
          Length = 562

 Score =  397 bits (1019), Expect = e-108,   Method: Composition-based stats.
 Identities = 173/451 (38%), Positives = 259/451 (57%), Gaps = 16/451 (3%)

Query: 198 FKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFH 257
            K  K+        S R  L R+ G A+ T ++L  YL +LE++ + DHR +   MDLF 
Sbjct: 109 PKYFKIINVSVHHPSERAQLVRVRGVAFETDEQLQDYLQWLEKASETDHRIIGERMDLFS 168

Query: 258 IAEDG-SGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
             ++   G++ +H KG  I   +ISYMR       Y+E+ T  V    LW+ SGH+D+YR
Sbjct: 169 FHDETGPGLVLFHPKGQLIRNEMISYMREINSSMGYQEVYTSHVFRTVLWKISGHYDTYR 228

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
             M          KD     +KPMNCP H+ ++   ++SYR+LP+R +EFG+VYR E  G
Sbjct: 229 DKMLIF------NKDDDELGIKPMNCPAHILIYKSRVRSYRDLPLRFSEFGNVYRWEKKG 282

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF--EKIMVKLSTRPEK 433
            L+GL+R RGFTQDD H+F  ++Q+ +E   + N  + +   FGF  + + + LSTRP++
Sbjct: 283 ELYGLLRTRGFTQDDGHIFLREDQIRDEVKTLINKTLEVLNKFGFRGDDVRINLSTRPDE 342

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
            +GSD  W+ A N +  VL  +           +   EGAFYGPK ++ ++D++ R WQ 
Sbjct: 343 SIGSDEQWEKATNSLLNVLKELGTQ------FIIKEKEGAFYGPKIDFDIRDSLNRWWQL 396

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI 553
            TIQVDFNLP RF   YV+    K  PVMIHRA++GS++R I I++E+F+G LP WLSP+
Sbjct: 397 STIQVDFNLPERFKLEYVDEDGSKKRPVMIHRAIYGSLDRMIAILLEHFRGRLPAWLSPV 456

Query: 554 QAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
           Q  +  I+    EYA +I  +L+ + +  E D   ET++ +I+    + +P ++I G KE
Sbjct: 457 QVRILPISEENQEYANKILVMLRENGIRGELDPSGETLSKRIKRAYDEGVPYLVIVGRKE 516

Query: 614 ASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           A E  + IR  G+   + V L D I  +  E
Sbjct: 517 ALEEKVTIRSRGNVEVKGVPLKDFIEKINLE 547


>gi|326437267|gb|EGD82837.1| threonyl-tRNA synthetase 1 [Salpingoeca sp. ATCC 50818]
          Length = 604

 Score =  396 bits (1016), Expect = e-108,   Method: Composition-based stats.
 Identities = 178/547 (32%), Positives = 279/547 (51%), Gaps = 31/547 (5%)

Query: 103 GFYYDFDKEQPFS--SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVE 160
           GF+Y+   +   +  +D LAQ+EK M E+        +  ++ E+A ++F          
Sbjct: 8   GFFYEGHLKHGQTVNTDALAQVEKHMHELCRLQHDLQRIDVTPEQALDVFCDNPFKQHFI 67

Query: 161 ILESIPAKENVTLYRQGEWFDLCRGPHVRSTG-QVKKFFKLMKVAGAYWRGDSNRPM--- 216
                  + ++++Y+   + DLC GPH+R+      K   L   + A +       M   
Sbjct: 68  HRAQQQGETSISIYKLASFVDLCEGPHIRNLRPFSSKTIALTSTSQAEFDWSGREEMKPD 127

Query: 217 -------LSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWH 269
                  L+R YG  + ++Q    +   +EE EK +H  + + + +F   +   G  F+ 
Sbjct: 128 NWDTHTPLTRTYGICFPSKQMFRHWKRDVEEREKYNHSAVGKSLSIFMQHDTSPGAPFFL 187

Query: 270 RKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTI 328
             G ++   L   +RR+ +   YEE+ TP V  Q LW+ SGHWD YR +M+ V   D+  
Sbjct: 188 PHGVRLLHRLTDLIRRQFRIRGYEEVMTPLVFSQKLWETSGHWDHYRDDMYRVMGFDEKS 247

Query: 329 KDLRTF----------ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLH 378
                            LKPMNCP H  +F H  +S+ +LP+RL EF +++RNE SG+L 
Sbjct: 248 SGNGGNDDDDDDEYLRGLKPMNCPAHCLIFKHTKRSHHDLPLRLGEFSALHRNEASGALA 307

Query: 379 GLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD 438
           GL RVR F QDDAH+FCT+EQ+  E     + + ++Y   GF   +   STRP++  G  
Sbjct: 308 GLTRVRQFHQDDAHIFCTEEQIQQEVAGCLDFVRTVYDACGFTYSLTF-STRPDEFTGDI 366

Query: 439 ALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
           + WD AE  ++  LD         I+  +  G+GAFYGPK +  L+D +GR  Q  TIQ+
Sbjct: 367 STWDRAEAQLRACLDAAH------IDFDINEGDGAFYGPKIDVYLEDRMGRRHQSATIQL 420

Query: 499 DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVT 558
           DF LP RF+  + ++   +  PV+IHRA+ GS+ER   +++E+ +G+LPLW SP Q  V 
Sbjct: 421 DFQLPQRFDLNFTDAAMMQQRPVIIHRAILGSLERMTAVLLEHTRGHLPLWCSPRQVAVL 480

Query: 559 TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERS 618
           +++S++   A  +   L S  L  ET   + TI  K+R     K   II+ GD+EA    
Sbjct: 481 SVSSASRAAAAAVHRQLVSDGLHAETFLEDTTIARKVRAAEQLKFNAIIVVGDEEAKTGK 540

Query: 619 IGIRRFG 625
             +R   
Sbjct: 541 FSVRWRD 547


>gi|70607029|ref|YP_255899.1| threonyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
 gi|68567677|gb|AAY80606.1| threonine-tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
          Length = 552

 Score =  395 bits (1014), Expect = e-107,   Method: Composition-based stats.
 Identities = 163/513 (31%), Positives = 272/513 (53%), Gaps = 24/513 (4%)

Query: 144 EKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKV 203
           ++A++  +  +  Y  +++E      ++T+   G    L  G             K  ++
Sbjct: 53  DEAKDFAKYNQYDY--QLVEDNRG--SITVVYNGHQIKLNGGKP-----NQNVHPKYFQI 103

Query: 204 AGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGS 263
                   S      R+ G  +  +++L  YL +LE+  + DHR +   +DLF   E+  
Sbjct: 104 LSISVHHPSPEKQYVRVLGVGFEKEEQLKDYLNWLEKVSEYDHRIIGDRLDLFSFPEEAP 163

Query: 264 G-VIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
             V+ +H  G  I + ++ +M        Y+E+ T  V    LW+ SGH+D Y+  M   
Sbjct: 164 PGVVLFHPNGQIIRKEMMRFMEEINDSMGYKEVYTSHVYRSLLWKISGHYDYYKDKMLLF 223

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           +  +D         +KPMNCP H+ ++   ++SY++LP+R +EFG VYR E  G L+GL+
Sbjct: 224 EIDND-----EELGIKPMNCPAHILIYKSKVRSYKDLPIRFSEFGHVYRWEKKGELYGLL 278

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF--EKIMVKLSTRPEKRVGSDA 439
           RVRGFTQDD H+F  ++Q+ +E   +    + +   FGF  + + V LSTRP++ +G+D 
Sbjct: 279 RVRGFTQDDGHIFLREDQIKDEIKLLMKKTLDVLAIFGFKGDDVRVNLSTRPDESIGTDE 338

Query: 440 LWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVD 499
            W+ A + +   L+ +       I   V   EGAFYGPK ++ ++D++ R WQ  TIQVD
Sbjct: 339 QWNKATDALISALNELN------IKYEVKEKEGAFYGPKIDFDIRDSLSRWWQLSTIQVD 392

Query: 500 FNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTT 559
           FNLP RF   YV+    K  PVM+HRA++GSI+RF+ I++E+F+G LP WLSPIQ  V  
Sbjct: 393 FNLPERFKLEYVDKDGSKKRPVMVHRAIYGSIDRFMAILLEHFRGKLPTWLSPIQVRVLP 452

Query: 560 ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSI 619
           IT    +Y   +   L+ + + ++ D   ET++ +I++     +P +II G KE  E  +
Sbjct: 453 ITDEIEDYGNSLMAKLRENKIRVDMDSGEETLSKRIKKAYDDGVPYLIIVGRKEKDEGKV 512

Query: 620 GIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
            +R  G+   + +++   +  L +E    D  +
Sbjct: 513 TVRARGNIEIRGINVEKFVQALVEEIRNKDLNQ 545


>gi|76363445|sp|Q4J9C4|SYT_SULAC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
          Length = 549

 Score =  395 bits (1014), Expect = e-107,   Method: Composition-based stats.
 Identities = 163/513 (31%), Positives = 272/513 (53%), Gaps = 24/513 (4%)

Query: 144 EKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKV 203
           ++A++  +  +  Y  +++E      ++T+   G    L  G             K  ++
Sbjct: 50  DEAKDFAKYNQYDY--QLVEDNRG--SITVVYNGHQIKLNGGKP-----NQNVHPKYFQI 100

Query: 204 AGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGS 263
                   S      R+ G  +  +++L  YL +LE+  + DHR +   +DLF   E+  
Sbjct: 101 LSISVHHPSPEKQYVRVLGVGFEKEEQLKDYLNWLEKVSEYDHRIIGDRLDLFSFPEEAP 160

Query: 264 G-VIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
             V+ +H  G  I + ++ +M        Y+E+ T  V    LW+ SGH+D Y+  M   
Sbjct: 161 PGVVLFHPNGQIIRKEMMRFMEEINDSMGYKEVYTSHVYRSLLWKISGHYDYYKDKMLLF 220

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           +  +D         +KPMNCP H+ ++   ++SY++LP+R +EFG VYR E  G L+GL+
Sbjct: 221 EIDND-----EELGIKPMNCPAHILIYKSKVRSYKDLPIRFSEFGHVYRWEKKGELYGLL 275

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF--EKIMVKLSTRPEKRVGSDA 439
           RVRGFTQDD H+F  ++Q+ +E   +    + +   FGF  + + V LSTRP++ +G+D 
Sbjct: 276 RVRGFTQDDGHIFLREDQIKDEIKLLMKKTLDVLAIFGFKGDDVRVNLSTRPDESIGTDE 335

Query: 440 LWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVD 499
            W+ A + +   L+ +       I   V   EGAFYGPK ++ ++D++ R WQ  TIQVD
Sbjct: 336 QWNKATDALISALNELN------IKYEVKEKEGAFYGPKIDFDIRDSLSRWWQLSTIQVD 389

Query: 500 FNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTT 559
           FNLP RF   YV+    K  PVM+HRA++GSI+RF+ I++E+F+G LP WLSPIQ  V  
Sbjct: 390 FNLPERFKLEYVDKDGSKKRPVMVHRAIYGSIDRFMAILLEHFRGKLPTWLSPIQVRVLP 449

Query: 560 ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSI 619
           IT    +Y   +   L+ + + ++ D   ET++ +I++     +P +II G KE  E  +
Sbjct: 450 ITDEIEDYGNSLMAKLRENKIRVDMDSGEETLSKRIKKAYDDGVPYLIIVGRKEKDEGKV 509

Query: 620 GIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
            +R  G+   + +++   +  L +E    D  +
Sbjct: 510 TVRARGNIEIRGINVEKFVQALVEEIRNKDLNQ 542


>gi|262341223|ref|YP_003284078.1| threonine--tRNA ligase [Blattabacterium sp. (Blattella germanica)
           str. Bge]
 gi|262272560|gb|ACY40468.1| threonine--tRNA ligase [Blattabacterium sp. (Blattella germanica)
           str. Bge]
          Length = 424

 Score =  395 bits (1014), Expect = e-107,   Method: Composition-based stats.
 Identities = 171/423 (40%), Positives = 252/423 (59%), Gaps = 15/423 (3%)

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-K 286
            +  + +   E+    DHRK+ +++  F  ++  GSG+  W  +G  +   L  ++   +
Sbjct: 1   MDKEKSVPLKEDPNTIDHRKIGKKLKFFIFSDKVGSGLPLWLPRGTILRNNLEEFLTDIQ 60

Query: 287 IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA 346
            K  YE + TP +  + L+ QSGHW  Y  + F       T ++   F LKPMNCP H  
Sbjct: 61  KKSGYEMVVTPHIGHKKLYIQSGHWRKYGKDNFK---PIQTPREEEEFLLKPMNCPHHCE 117

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           V+     SYR+LP R AEFG+VYR E SG LHGL RVR FTQDDAH+FCT +Q+  E  K
Sbjct: 118 VYRSQEWSYRDLPKRFAEFGTVYRYEQSGELHGLTRVRSFTQDDAHIFCTYDQVLEEFKK 177

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
           + NL+  +++  GF +  V++S R     +  +GS+  W+ AE  +   +       +++
Sbjct: 178 VINLVFYVFRCLGFSEYTVRISLRDTSKIDNYIGSEKNWEKAEKAILNAVK------EEK 231

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
           I   +  GE AFYGPK ++++KD++GR WQ GTIQVD+NLP RF+ +Y   ++EKC PVM
Sbjct: 232 IKASINYGEAAFYGPKLDFLIKDSLGRSWQLGTIQVDYNLPERFDLYYKGKNNEKCRPVM 291

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSI 582
           IHRA FGS+ER I I+IE+ KGNLPLWL+P Q ++  I+   + YA++I NL+ ++++ +
Sbjct: 292 IHRAPFGSLERMIAIVIEHTKGNLPLWLAPNQGVILPISDKYIVYAKKILNLMLNYNIRV 351

Query: 583 ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             D RNE IN KIR+   KKIP +II G+KE     I +RR G       S+   I  + 
Sbjct: 352 FVDSRNEKINKKIRDSEEKKIPYMIILGEKEEKNEMISLRRHGLGHIGTFSISKGIETIF 411

Query: 643 KES 645
            E+
Sbjct: 412 NET 414


>gi|212696507|ref|ZP_03304635.1| hypothetical protein ANHYDRO_01045 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212676492|gb|EEB36099.1| hypothetical protein ANHYDRO_01045 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 390

 Score =  394 bits (1012), Expect = e-107,   Method: Composition-based stats.
 Identities = 152/394 (38%), Positives = 232/394 (58%), Gaps = 14/394 (3%)

Query: 253 MDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHW 311
           M+LF   E+  G  F+   G  +   L+++    + +  Y EI TP ++++ LW +SGHW
Sbjct: 1   MNLFSFHEEAPGFPFFKENGMILRHELLNWWTDVLAENGYGEIQTPLIMNEELWHRSGHW 60

Query: 312 DSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRN 371
           D Y+ NM+  K       D   +A+KPMNCPG V V+     SYR+LP+RLAE+G V+R+
Sbjct: 61  DHYKENMYFTKI------DGENYAVKPMNCPGSVLVYGEEPHSYRDLPIRLAEYGQVHRH 114

Query: 372 EPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP 431
           E SG+LHGL RVR FTQDDAHV+C   Q+ +E  K+ +L   +Y  FGF+  + +LSTRP
Sbjct: 115 ELSGALHGLFRVRTFTQDDAHVYCLPSQVKDEVFKMIDLADLLYSTFGFKYKI-ELSTRP 173

Query: 432 EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDW 491
           +  +G    WD AE  ++  L       +  I+  +   +GAFYGPK ++ L+DA  R W
Sbjct: 174 DDFMGKIEEWDFAEKALEDALK------ERGIDYQINPKDGAFYGPKIDFHLEDAAKRTW 227

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLS 551
           QCGTIQ+DF LP  F+  Y++ + EK  PVM+HRA+ GS+ERFIG + E F G  PLW++
Sbjct: 228 QCGTIQLDFQLPQNFDLTYIDENGEKKRPVMLHRALLGSVERFIGSVTEQFAGRFPLWIN 287

Query: 552 PIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
           P Q  +  ++    ++A ++A  +K     ++ D R+E + YKIR+  + +   +++ G+
Sbjct: 288 PKQVAIIPVSDKFADFADDLAEKIKKAGYRVDVDHRSEGVGYKIRQAQLMRTNYMLVVGE 347

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
            E     + +R      T+ VS  + I  L +E 
Sbjct: 348 NEEKSGKLTVRNRDGEETKDVSFEEFIEKLNQER 381


>gi|162452628|ref|YP_001614995.1| hypothetical protein sce4352 [Sorangium cellulosum 'So ce 56']
 gi|161163210|emb|CAN94515.1| thrS [Sorangium cellulosum 'So ce 56']
          Length = 753

 Score =  393 bits (1010), Expect = e-107,   Method: Composition-based stats.
 Identities = 173/543 (31%), Positives = 276/543 (50%), Gaps = 27/543 (4%)

Query: 114 FSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL------ESIPA 167
            + D+L +  ++++E   RD   L + L      E +++   + K EI          P 
Sbjct: 227 PNKDDLDKYVRRLEEAKKRDHRTLGRDLELYLVSERYDTHAYSEKDEIDLYVGVDAEAPL 286

Query: 168 KENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTA-WN 226
              +  +  G       G  +R T +  +  K    AG     ++   +  R+ G A   
Sbjct: 287 DRALVEHTLGAAASAFPGRTLRRTVKFGEAPKAAAGAGG--GDEARPRLHVRLRGAAAQE 344

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR- 285
           ++      +   ++++   H +     ++      G+G++ W  KG  +   +    R+ 
Sbjct: 345 SKSAFRAAVSARKDADVEVHFEPHFVEEI------GAGLVMWLPKGGLLRTIIEDQWRKM 398

Query: 286 KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +++ Y+ + +P +    LW+ SGHWD YR  MF+         D   +  KPMNCP H+
Sbjct: 399 HLEEGYDIVYSPHIAKADLWKTSGHWDFYREGMFSPMSV-----DGHDYCCKPMNCPFHI 453

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +     +SYRE P+RLAE G+VYR E +G +HGLMRVRGFTQDDAH+FC  +Q+  E  
Sbjct: 454 LMVKSRTRSYREFPMRLAELGTVYRYEAAGVMHGLMRVRGFTQDDAHLFCRADQVEQEIH 513

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
           ++   I+ + + FGFE+  + LSTRPEK VG    W  AE+ + G L  +       +  
Sbjct: 514 RVLRFILKMLRTFGFEQFDINLSTRPEKYVGGLEDWAKAESTLAGALKALG------LEY 567

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
            V  G GAFYGPK +  L DA+ R WQC T+Q DFN P RF   +VN+  E   P+M+HR
Sbjct: 568 TVDPGGGAFYGPKIDIKLVDALDRRWQCSTLQYDFNNPERFTLGFVNAKGELEQPIMLHR 627

Query: 526 AVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD 585
           A+ GSIERFIG+++E+  G LP WLSP QA V T++    ++A+++   L++H +     
Sbjct: 628 ALLGSIERFIGVLLEHHAGALPAWLSPEQARVVTVSDKHNDHAEQVTQALRAHGIRASFV 687

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
             +E +  KIRE  ++KIP +++ GDKE   +   +R    +    +        L ++ 
Sbjct: 688 RSSEKLGAKIREAQVEKIPHMLVIGDKEVEAKGATVRLRDGSDRGFMKTEALAEFLREQC 747

Query: 646 LPP 648
             P
Sbjct: 748 AIP 750



 Score =  202 bits (514), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 92/260 (35%), Positives = 150/260 (57%), Gaps = 7/260 (2%)

Query: 6   KLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITP 64
            +  PDG +       T  D A +IS  LA+  V   ++G++ DL  P+R+G+ +E++  
Sbjct: 4   SVVLPDGKVLALEDGNTAFDAARAISPRLAEAVVVARVDGEIQDLRVPLRDGAKLELLKA 63

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDK-EQPFSSDELAQI 122
           + P     I HS  H+MA AV  ++P  +V +GP    D FYYDFD   + F+  +L  I
Sbjct: 64  DTPEGRDTINHSAEHLMATAVLRLFPGAKVTMGPKNHGDEFYYDFDVAGRTFTPSDLEMI 123

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKE--AYKVEILESIPAKENVTLYRQGEWF 180
           E +++++I +   F    +  + A   FES  +   YK EIL  IP   ++++YR GE+ 
Sbjct: 124 EAEVKKLIEQKIKFELHSVHKKNALTYFESLGQKNEYKEEILSWIPED-SISIYRCGEFV 182

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           D+CRGPH+   G +K F K+   + AYWR D+ +  L R+ G A+  + +L +Y+  LEE
Sbjct: 183 DICRGPHLPHAGFIKGF-KITSSSAAYWRADATKQSLQRVRGVAFPNKDDLDKYVRRLEE 241

Query: 241 SEKRDHRKLAREMDLFHIAE 260
           ++KRDHR L R+++L+ ++E
Sbjct: 242 AKKRDHRTLGRDLELYLVSE 261


>gi|168070814|ref|XP_001786949.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162660100|gb|EDQ48237.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 375

 Score =  392 bits (1008), Expect = e-107,   Method: Composition-based stats.
 Identities = 173/388 (44%), Positives = 264/388 (68%), Gaps = 14/388 (3%)

Query: 216 MLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKI 275
           ML RIYGTA+  + +L ++L+ LEE++KRDHRKL +E++LF  +E+  G+ F+  KG  +
Sbjct: 1   MLQRIYGTAFPNKAQLDEHLHMLEEAKKRDHRKLGKELELFMFSEEAPGMPFYLPKGMTV 60

Query: 276 FQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
              L  + R  ++++ Y+E+ TP +++  LW+QSGHW+ Y+ NM+  +  D T      F
Sbjct: 61  RTELEQFSRELQLQEGYQEVRTPLMMNNRLWEQSGHWEHYKDNMYFSEVDDAT------F 114

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           ALKPMNCPGH+ +F + L SYRELP+R+ EFG V+R+E SG+L+G+MRVR F QDDAH++
Sbjct: 115 ALKPMNCPGHMLIFKNTLHSYRELPIRMMEFGQVHRHEFSGALNGMMRVRTFCQDDAHLY 174

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDT 454
              EQ+ +E  +  +LI  +Y  FGFE  + +LSTRPE  +GS+ LWD AE  ++ VLD 
Sbjct: 175 VMPEQIEDEINQAISLIGRMYDIFGFEYKI-ELSTRPEDSMGSEELWDQAERALQNVLD- 232

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH 514
                +  +   +  G+GAFYGPK ++ + DA+ R WQCGTIQ+DF +P +F+  Y+   
Sbjct: 233 -----RRGVQYRINEGDGAFYGPKIDFHILDALKRSWQCGTIQLDFQMPEKFDLTYIGED 287

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANL 574
           S K  PV+IHRA++GSI+RFIGI+ E++ G  PLWL+P+Q  +  ++    +YA ++ + 
Sbjct: 288 SLKHRPVVIHRAIYGSIDRFIGILTEHYAGAFPLWLAPVQVKLLPVSDHYADYALQVQSQ 347

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKK 602
           L++  + +ETD R+E + YKIRE  ++K
Sbjct: 348 LRAAGIRVETDLRSEKLGYKIREAQMEK 375


>gi|301061986|ref|ZP_07202704.1| threonine--tRNA ligase [delta proteobacterium NaphS2]
 gi|300443910|gb|EFK07957.1| threonine--tRNA ligase [delta proteobacterium NaphS2]
          Length = 483

 Score =  392 bits (1007), Expect = e-106,   Method: Composition-based stats.
 Identities = 195/484 (40%), Positives = 297/484 (61%), Gaps = 19/484 (3%)

Query: 16  NFPVHA-TGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPEDPRSLAVI 73
                  + ++    +      + VAV ING   DLS  + +   +E I       L ++
Sbjct: 15  QVEAETLSAAEALAHLKVGGLDRVVAVKINGVPGDLSAGLGDKTELEPIYLHSDEGLEIL 74

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           RHS +H+MA AV+ ++P V+V IGP I+DGFYYDFD ++PF  D+L  +E+KM EII  D
Sbjct: 75  RHSTSHVMAMAVRELFPGVKVTIGPAIKDGFYYDFDYKRPFKEDDLPLVEEKMHEIIEAD 134

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQ 193
            PF ++  +  +A   F+++ E YKVE++E + A E V+LY QG + DLCRGPH+ STG 
Sbjct: 135 LPFTRKETAVSEALAFFKAQGEDYKVELIEDLDA-EMVSLYTQGSFTDLCRGPHIPSTGM 193

Query: 194 VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREM 253
           +K F  + K AGAYWRGD +RPMLSRIYG  ++ +++L ++L+ LEE+ KR+H KL  ++
Sbjct: 194 IKAFHLI-KTAGAYWRGDEHRPMLSRIYGVGFSDRKQLKKHLHMLEEARKRNHVKLGAQL 252

Query: 254 DLFHIAEDGS-GVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHW 311
           +LF   E+   G++ WH  G  +   L  + +   +K  Y     P+VL   LW++SGH+
Sbjct: 253 ELFSTYEEVGAGMVVWHPNGAMLRHLLEEFEIAEHLKRGYALARGPEVLKTDLWKKSGHF 312

Query: 312 DSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRN 371
            +YR NM+       T  D +++ +KPMNC  H+ ++   ++SYR+LP R  E G+V+R+
Sbjct: 313 ANYRENMYF------TEIDGQSYGMKPMNCLSHMLIYGSKIRSYRDLPRRYFELGTVHRH 366

Query: 372 EPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP 431
           E SG LHGL RVR FTQDDAH+ CT  Q+ +E   + + +  +   F F+  + ++STRP
Sbjct: 367 ERSGVLHGLFRVREFTQDDAHILCTPGQLNDEIKGVLDFVREVMGIFQFDYEL-EISTRP 425

Query: 432 EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDW 491
           EK +GSD  W+ A   ++  +D ++      ++  +  G+GAFYGPK +  L+DA+GR W
Sbjct: 426 EKSIGSDEDWELATQALEKAMDELQ------LDYEINEGDGAFYGPKIDVKLEDALGRKW 479

Query: 492 QCGT 495
           QC T
Sbjct: 480 QCAT 483


>gi|70952361|ref|XP_745354.1| threonine--tRNA ligase [Plasmodium chabaudi chabaudi]
 gi|56525650|emb|CAH82048.1| threonine--tRNA ligase, putative [Plasmodium chabaudi chabaudi]
          Length = 505

 Score =  392 bits (1006), Expect = e-106,   Method: Composition-based stats.
 Identities = 174/517 (33%), Positives = 266/517 (51%), Gaps = 80/517 (15%)

Query: 202 KVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED 261
           K +  YW GD N   L R+YG ++  + ELT Y+ F+ E ++ DHR + + ++LF   ++
Sbjct: 3   KNSSPYWLGDKNNDSLQRVYGISFQKKTELTDYIKFIGEGKR-DHRNVGKNLNLFFFEKE 61

Query: 262 G-SGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMF 319
              G  FW   G  I+  LI +MR++ +   YEE+ TP +    LW+ SGH+ +Y+  MF
Sbjct: 62  TLPGSGFWFTHGANIYNKLIEFMRKEYRIRKYEEVITPNIFSCDLWKTSGHYQNYKNCMF 121

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHG 379
                     + + + +KPMNCPGH  +F     SY+ LP+RLA+FG ++RNE +GSL G
Sbjct: 122 IFNI------ENKEWGMKPMNCPGHCLIFKQLNASYKSLPIRLADFGVLHRNEITGSLSG 175

Query: 380 LMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDA 439
           L RVR F QDDAH+FC+ + +  E + +   I  +Y  FGF+  +  LSTRP K +G   
Sbjct: 176 LTRVRRFQQDDAHIFCSLDHIKTEVINVLQFIFYVYNLFGFKYDL-YLSTRPPKYIGDIN 234

Query: 440 LWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVD 499
            W+ AE  +K  L+         +   +  G+GAFYGPK + +L+D++ R  QCGT+Q+D
Sbjct: 235 TWNFAEQSLKEALELAN------VKWKLNEGDGAFYGPKIDIVLRDSLNRTHQCGTVQLD 288

Query: 500 FNLPSRFNAFYVNSH-------------------SEKC---------------------- 518
           F LP RFN  Y N                     +EK                       
Sbjct: 289 FQLPIRFNLQYKNKEYGVGQETDSNLVNQSNKDANEKKEDSTMGNAGNNDEQNKLDGENA 348

Query: 519 --------------HPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA 564
                          P++IHRA+ GS+ERF+ I++E+  G  P WLSP QAIV  I+   
Sbjct: 349 GNNQPGGELKKGFDRPIIIHRAILGSVERFVAILVEHTSGKFPFWLSPRQAIVLPISDKF 408

Query: 565 VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRF 624
            EYA+ I ++L ++   ++ D    T+N KIRE  +K+   I++ G+KE S  ++ +R  
Sbjct: 409 NEYAKYIHDVLTNNLFDVDVDISVNTLNKKIREAQLKQYNFILVVGEKELSTNTVTVRDR 468

Query: 625 GSTTTQKVSLLDAIPILTK---------ESLPPDCQK 652
            +   QK ++ + +    K           +PP  QK
Sbjct: 469 DNPNDQKYTIQELVNNFKKMLDINSVKLNEIPPFIQK 505


>gi|50543472|ref|XP_499902.1| YALI0A09427p [Yarrowia lipolytica]
 gi|49645767|emb|CAG83829.1| YALI0A09427p [Yarrowia lipolytica]
          Length = 461

 Score =  392 bits (1006), Expect = e-106,   Method: Composition-based stats.
 Identities = 151/410 (36%), Positives = 235/410 (57%), Gaps = 17/410 (4%)

Query: 249 LAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQ 307
           ++    L+ I+ +  G  F+   G +I+  L  +MR +++   ++EI++P +    LW+Q
Sbjct: 50  ISDRQQLYWISPESPGSAFFLPHGQRIYSRLGEFMRLQLRVFGFQEISSPIMYKNSLWKQ 109

Query: 308 SGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGS 367
           SGHW+ ++ +MF V+   +       F+LKPMNCPGH  +FN   +SYRELP+R ++F  
Sbjct: 110 SGHWEKFQDDMFRVQPGHEETSVEEEFSLKPMNCPGHCLLFNSLKRSYRELPLRYSDFSP 169

Query: 368 VYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKL 427
           ++RNE SG+L GL RVR F QDD H+FCT EQ+ +E  +   L+   Y  FG E   V L
Sbjct: 170 LHRNEASGALSGLTRVRRFHQDDGHIFCTPEQVESEISRALKLVQQTYNTFGLEISRVVL 229

Query: 428 STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAI 487
           STRPE  +G    W+DAE  +  VLD+   S        +  G+GAFYGPK + ++KD  
Sbjct: 230 STRPETFIGDIEQWNDAEKALTSVLDSWSVSKGK---WELNAGDGAFYGPKIDILVKDKH 286

Query: 488 GRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           G++ Q  T Q+DF LP RF   Y ++      PVM+HRAV+GS+ERF+ I+I++++G  P
Sbjct: 287 GKEHQTATTQLDFQLPERFQLKYFDASETAQRPVMVHRAVYGSLERFLAILIDHYEGKWP 346

Query: 548 LWLSPIQAIVTTITSSAVEYAQEIANL-------------LKSHHLSIETDFRNETINYK 594
           LWLSP Q +V  +  +  E+A+++A               L +  L  + D R+ET+  K
Sbjct: 347 LWLSPRQCMVLPVGEAQNEFAEKVAAQLSGLPSITDQSTPLSASTLFCDVDTRSETLGQK 406

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           I++   +    I + GDKE  E  + +++ G    Q +++ +A     KE
Sbjct: 407 IKQARNEGYSYIAVIGDKEMQEGKVTVQKPGKKDRQLLTVDEARDFFHKE 456


>gi|49168658|emb|CAE02700.1| putative threonyl tRNA synthase [Yarrowia lipolytica]
          Length = 461

 Score =  391 bits (1005), Expect = e-106,   Method: Composition-based stats.
 Identities = 151/410 (36%), Positives = 235/410 (57%), Gaps = 17/410 (4%)

Query: 249 LAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQ 307
           ++    L+ I+ +  G  F+   G +I+  L  +MR +++   ++EI++P +    LW+Q
Sbjct: 50  ISDRQQLYWISPESPGSAFFLPHGQRIYSRLGEFMRLQLRVFGFQEISSPIMYKNSLWKQ 109

Query: 308 SGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGS 367
           SGHW+ ++ +MF V+   +       F+LKPMNCPGH  +FN   +SYRELP+R ++F  
Sbjct: 110 SGHWEKFQDDMFRVQPGHEETSVEEEFSLKPMNCPGHCLLFNSLKRSYRELPLRYSDFSP 169

Query: 368 VYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKL 427
           ++RNE SG+L GL RVR F QDD H+FCT EQ+ +E  +   L+   Y  FG E   V L
Sbjct: 170 LHRNEASGALIGLTRVRRFHQDDGHIFCTPEQVESEISRALKLVQQTYNTFGLEISRVVL 229

Query: 428 STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAI 487
           STRPE  +G    W+DAE  +  VLD+   S        +  G+GAFYGPK + ++KD  
Sbjct: 230 STRPETFIGDIEQWNDAEKALTSVLDSWSVSKGK---WELNAGDGAFYGPKIDILVKDKH 286

Query: 488 GRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           G++ Q  T Q+DF LP RF   Y ++      PVM+HRAV+GS+ERF+ I+I++++G  P
Sbjct: 287 GKEHQTATTQLDFQLPERFQLKYFDASETAQRPVMVHRAVYGSLERFLAILIDHYEGKWP 346

Query: 548 LWLSPIQAIVTTITSSAVEYAQEIANL-------------LKSHHLSIETDFRNETINYK 594
           LWLSP Q +V  +  +  E+A+++A               L +  L  + D R+ET+  K
Sbjct: 347 LWLSPRQCMVLPVGEAQNEFAEKVAAQLSGLPSITDQSTPLSASTLFCDVDTRSETLGQK 406

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           I++   +    I + GDKE  E  + +++ G    Q +++ +A     KE
Sbjct: 407 IKQARNEGYSYIAVIGDKEMQEGKVTVQKPGKKDRQLLTVDEARDFFHKE 456


>gi|295698321|ref|YP_003602976.1| threonyl-tRNA synthetase [Candidatus Riesia pediculicola USDA]
 gi|291157332|gb|ADD79777.1| threonyl-tRNA synthetase [Candidatus Riesia pediculicola USDA]
          Length = 414

 Score =  391 bits (1005), Expect = e-106,   Method: Composition-based stats.
 Identities = 182/417 (43%), Positives = 276/417 (66%), Gaps = 16/417 (3%)

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK 288
                  +     +++DHR + R+++LF+  ++  G +FW+  G  IFQ L  Y+R K+K
Sbjct: 1   MNQRNRKFSNHTEKEQDHRSIGRQLELFYFDQNSPGSVFWNPNGLIIFQELKRYIRLKLK 60

Query: 289 D-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
           +  Y+E+ TP++L + LW+++GH  +Y   MF V        + R + LKPMNCPGH+ +
Sbjct: 61  EYQYQEVKTPEILHKSLWKKTGHLQNYEKYMFKV------SSESRKYCLKPMNCPGHIKI 114

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
           F   ++SYR+LP+R+AEFG+ +RNE SGSLHGLMRVR FTQDDAH+FCTKEQ+F E  K 
Sbjct: 115 FQQKIRSYRDLPLRIAEFGNCHRNELSGSLHGLMRVREFTQDDAHIFCTKEQVFEEIKKC 174

Query: 408 HNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGV 467
             ++  +YK FGF+KI ++L+TRP++R+G +  WD AE+I++  L+             +
Sbjct: 175 IGMVQEVYKTFGFKKISIRLATRPKQRIGEEKYWDYAESILEKALEK---------EFDL 225

Query: 468 LLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAV 527
           L   GAFYGPK E+ L D + R+WQCGTIQ+DF LP +   FY++  ++K HP++IHRA+
Sbjct: 226 LPENGAFYGPKIEFTLHDRLEREWQCGTIQLDFLLPIQLGVFYIDQKNKKQHPMIIHRAI 285

Query: 528 FGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR 587
            GSIERFIGI+IE++ G LP WLSPIQ +V +++   + ++++I   +K   + +  D +
Sbjct: 286 LGSIERFIGILIEHYSGYLPTWLSPIQVVVISVSKKYINFSKKIVQRIKYAGIRVYHDLK 345

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           NE IN KIR+HSI KIP I++CG+KE    S+ IRR      + +S+ + I +++ E
Sbjct: 346 NEKINLKIRKHSINKIPYIVLCGEKEEKTGSVSIRRKLEKVIKTISIENFIKMVSSE 402


>gi|108757584|ref|YP_630572.1| threonyl-tRNA synthetase [Myxococcus xanthus DK 1622]
 gi|108461464|gb|ABF86649.1| threonyl-tRNA synthetase [Myxococcus xanthus DK 1622]
          Length = 400

 Score =  391 bits (1003), Expect = e-106,   Method: Composition-based stats.
 Identities = 158/410 (38%), Positives = 247/410 (60%), Gaps = 14/410 (3%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
             ++ DHR L + +DLFH+ E+  G++FWH +G  +++ L  ++R++++ + Y+E+ TPQ
Sbjct: 1   MLDEHDHRALGQRLDLFHLQEEAPGMVFWHPRGLVLYRLLEEHVRQRMRREGYQEVRTPQ 60

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +  Q LW++SGHWD++R NMF V+         R   +KP++CPGH+ +      SYR+L
Sbjct: 61  LYAQPLWERSGHWDNFRENMFLVEDG------ARHLGVKPVSCPGHIELVQRMAPSYRDL 114

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RL EFG V+R EP G+LHGL R+R FTQDD H+FC + Q+  E ++    +   Y  F
Sbjct: 115 PLRLGEFGLVHRAEPGGALHGLFRLRQFTQDDGHIFCAEPQVVPEVVRFARSLKDFYAGF 174

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GF+ + V  S RP  R G D LWD AE+ +      +  + +  +   +  GEGAFYGPK
Sbjct: 175 GFDDVQVAFSGRPASRAGRDELWDKAESWL------LLAAKEAGLQCHMQPGEGAFYGPK 228

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E++LKD +GR WQCGTIQ+D  LP RF+  YV++   +  PVM+HRA+ GS+ERFIG+M
Sbjct: 229 LEFVLKDRLGRAWQCGTIQLDLVLPERFDLHYVDASGARVRPVMLHRALLGSLERFIGVM 288

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           +E+  G LP WL+P Q +V ++   A +YA+  A  L+        D R E+++ K+ + 
Sbjct: 289 LEHHGGALPPWLAPQQVVVASVGEGAADYAERFAAKLQEAGCRASVDRRGESLSRKVLDA 348

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
               +P +++ G +E +  ++ +R+      + V   DA   L     P 
Sbjct: 349 HAAGVPWLVVAGAREVAAGNVRLRQRDG-AQRDVPWEDAAAELVASCRPA 397


>gi|71892130|ref|YP_277862.1| threonyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus
           str. BPEN]
 gi|71796236|gb|AAZ40987.1| threonyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus
           str. BPEN]
          Length = 408

 Score =  390 bits (1002), Expect = e-106,   Method: Composition-based stats.
 Identities = 176/409 (43%), Positives = 268/409 (65%), Gaps = 13/409 (3%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
             +  +K DHR LA+++ L+H  +D  G++FWH+ GW + Q L   +R ++K+  Y+E+ 
Sbjct: 1   MSQVPKKNDHRNLAKQLHLYHTQKDAPGMVFWHQNGWILLQELKKIIRTQLKEYKYQEVK 60

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           +P +++  LW+++GHWD+Y  ++F       T  +   + +KPMNCPGH+ +FN G+KSY
Sbjct: 61  SPTMINHTLWKKTGHWDNYHEHIFT------TSSESHEYCIKPMNCPGHIQIFNQGIKSY 114

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           ++LP R+AEFG+ +RNEPSGSLHGLMR R FTQDD H+FCTK Q+F+E      ++  IY
Sbjct: 115 KDLPYRIAEFGNCHRNEPSGSLHGLMRTREFTQDDGHIFCTKTQIFDELNHCIKMMYDIY 174

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
             FGF+ I+VKLSTRP KR+G+D++WD AE  +  VL        + I+      +GAFY
Sbjct: 175 NTFGFKTILVKLSTRPAKRIGTDSIWDTAEQHLSTVLQH------NNISFQYQPNDGAFY 228

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK E+ L D++ R WQCGTIQ+DF+LP+  NA Y++ H+ +  PVMIHRA+ GS+ERFI
Sbjct: 229 GPKIEFALLDSLDRTWQCGTIQLDFSLPNLLNARYIDRHNSRVVPVMIHRAILGSMERFI 288

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
           G++ E + G  P WL+P Q ++  +T    EY   I   L +  +  + D RNE I +KI
Sbjct: 289 GLITEEYAGFFPTWLAPTQVVLMNVTDQQSEYVSVIEKKLINKKIRTKVDLRNEKIGFKI 348

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R +++++IP ++ICG+KE ++ ++ IR +   T +  ++   I  L  E
Sbjct: 349 RYYTLQRIPYMLICGNKEMNQNTVAIRTYRGQTLKNCNIDIFIKKLLCE 397


>gi|329943296|ref|ZP_08292070.1| threonyl-tRNA synthetase [Chlamydophila psittaci Cal10]
 gi|328814843|gb|EGF84833.1| threonyl-tRNA synthetase [Chlamydophila psittaci Cal10]
          Length = 379

 Score =  390 bits (1002), Expect = e-106,   Method: Composition-based stats.
 Identities = 153/382 (40%), Positives = 221/382 (57%), Gaps = 13/382 (3%)

Query: 265 VIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKC 323
           + F+H +G  I+  LI Y +R      Y+EI TPQ++++ LW+ SGHW +YR NM+ +K 
Sbjct: 1   MPFFHPRGMIIWDALIGYWKRLHQLAGYKEIQTPQLMNRSLWEVSGHWSNYRENMYTLKI 60

Query: 324 ADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRV 383
                 D   +A+KPMNCPG +  +   L SY++ P+R+AE G V+R E SG+L GLMRV
Sbjct: 61  ------DDEDYAIKPMNCPGCMLYYKTRLHSYKQFPLRIAEIGHVHRYEVSGALSGLMRV 114

Query: 384 RGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDD 443
           R F QDDAHVF T EQ+  E L I +L+  +Y  FG E  +   +   +  +GSD LW+ 
Sbjct: 115 RAFHQDDAHVFLTPEQVEEETLNILHLVSELYSTFGLEYHLELSTRPEKATIGSDELWEL 174

Query: 444 AENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLP 503
           A   ++  L              +  G+GAFYGPK +  +KDAI R WQCGTIQ+D  LP
Sbjct: 175 ATAALERALINSNTP------FIINPGDGAFYGPKIDIHVKDAIQRTWQCGTIQLDMFLP 228

Query: 504 SRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSS 563
            RF   Y N+  EK  PVM+HRA+FGSIERF+GI+IE+FKG  PLWLSP    + T+   
Sbjct: 229 ERFELEYTNAQGEKSTPVMLHRALFGSIERFLGILIEHFKGRFPLWLSPEHIRLITVADR 288

Query: 564 AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRR 623
               AQ++A   +   L +  D  NE+++ KIR     ++  ++  GD+E  + ++ IR 
Sbjct: 289 HQPRAQKLATAWQKLGLIVTVDDSNESVSKKIRNAQNMQVNYMVTLGDREIEQNTLAIRT 348

Query: 624 FGSTTTQKVSLLDAIPILTKES 645
             +     ++    I  + +E 
Sbjct: 349 RDNRVLNDMTEDKFINTILEEK 370


>gi|319760484|ref|YP_004124422.1| threonyl-tRNA synthetase [Candidatus Blochmannia vafer str. BVAF]
 gi|318039198|gb|ADV33748.1| threonyl-tRNA synthetase [Candidatus Blochmannia vafer str. BVAF]
          Length = 411

 Score =  388 bits (996), Expect = e-105,   Method: Composition-based stats.
 Identities = 184/412 (44%), Positives = 272/412 (66%), Gaps = 13/412 (3%)

Query: 234 YLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYE 292
                ++ +K+DHR L+ ++DLFH  +D  G+IFWH+ GW IFQ L  ++R+K++   Y+
Sbjct: 1   MDNHFQQYKKKDHRTLSNQLDLFHTQDDAPGMIFWHKNGWIIFQELKKFIRKKLQQYQYQ 60

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+ +P ++DQ LW+++GHWD+Y  ++F       T  + RT+ +KPMNCPGH+ +FN+G+
Sbjct: 61  EVKSPIMIDQELWKKTGHWDNYYEHIFI------TASENRTYCIKPMNCPGHIQIFNYGI 114

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
           KSY++LP+R+AEFG  +RNEPSGSLHGLMR+R FTQDDAH+FC+ EQ+  E      ++ 
Sbjct: 115 KSYKDLPLRIAEFGHCHRNEPSGSLHGLMRIREFTQDDAHIFCSIEQIPTELNYCIKMMY 174

Query: 413 SIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
            +Y  FGF+KI+VKLSTRP KR+G D++WD  E  +  +L       +  I       +G
Sbjct: 175 DVYHTFGFKKIIVKLSTRPIKRIGEDSIWDITEQCLVHILQ------KKNIEFTYQPQDG 228

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           AFYGPK E+IL D++ R WQCGT+Q+DF+LP    A Y++++++   PVMIHRA+ GSIE
Sbjct: 229 AFYGPKIEFILLDSLKRAWQCGTVQLDFSLPKLLKAKYIDNNNKYQIPVMIHRAILGSIE 288

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
           RFIG++ E + G LP WL+P Q ++  +T +   Y   IAN LK  +  ++ D RNE I 
Sbjct: 289 RFIGLITEEYSGFLPTWLAPTQIVLMNVTDAQSLYVTNIANRLKFENFRVQIDLRNEKIG 348

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            KIR H++ ++P +IICG+ E    +I IR F        ++   I  L +E
Sbjct: 349 CKIRLHTMHRVPYMIICGNSEVDHGTISIRTFRGRKINNYNIDTFIQKLKQE 400


>gi|124804231|ref|XP_001347941.1| threonine -- tRNA ligase, putative [Plasmodium falciparum 3D7]
 gi|23496195|gb|AAN35854.1|AE014840_2 threonine -- tRNA ligase, putative [Plasmodium falciparum 3D7]
          Length = 1013

 Score =  387 bits (993), Expect = e-105,   Method: Composition-based stats.
 Identities = 177/473 (37%), Positives = 275/473 (58%), Gaps = 22/473 (4%)

Query: 47  VCDLSDPV-REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY 105
           + DL+ P+     +E I  +      +  HS AHI+  +++ ++    + IGP +++GFY
Sbjct: 333 LWDLNVPLLGNCRVEFINIQSEEGQKIFWHSSAHILGSSLEKLFGG-FLTIGPALKEGFY 391

Query: 106 YDFDKEQ-PFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-E 163
           YD        ++++  +IE +  +++  + PF K   + E+A EL       +K+E++  
Sbjct: 392 YDIFLNNFSINNEDYKRIEDEFNKLVKDNVPFEKVICTKEEALEL--FDYNPFKLELIRS 449

Query: 164 SIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
            IP  +  ++YR G + DLC GPH+++TG+VK F K++K + AYW G      L R+YG 
Sbjct: 450 KIPDNKKTSVYRCGNFIDLCLGPHIKNTGKVKTF-KVLKNSSAYWLGQKENDSLQRVYGI 508

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSG-VIFWHRKGWKIFQTLISY 282
           ++  + EL +YL FLEE++KRDHR + + ++LF   ++ S    FW   G KI+  LI +
Sbjct: 509 SFQKKSELVEYLKFLEEAKKRDHRNVGKILNLFFFEKETSPGSCFWLPHGSKIYNKLIEF 568

Query: 283 MRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           +R++ +   YEE+ +P V    LW+ SGH+ +Y+  MF          + + + +KPMNC
Sbjct: 569 IRKEYRIRKYEEVISPNVFSCDLWKTSGHYQNYKDCMFLFNV------ENKEWGMKPMNC 622

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
           PGH  +F     SYR LPVRLA+FG ++RNE SGSL GL RVR F QDD+H+FC+ E + 
Sbjct: 623 PGHCLMFKQLNVSYRSLPVRLADFGVLHRNEISGSLSGLTRVRRFQQDDSHIFCSMEHIK 682

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E L   N +  +Y  FGF+  +  LSTRP+K +G  + W+ AE  +K  L         
Sbjct: 683 QEVLNTLNFLFYVYNLFGFKYEL-FLSTRPKKFIGQISTWNLAEQHLKDAL------YAA 735

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH 514
            +   +  G+GAFYGPK + ++KD++ R  QCGTIQ+DF LP RFN  Y N  
Sbjct: 736 NVQWKINEGDGAFYGPKIDILVKDSLNRTHQCGTIQLDFQLPVRFNLQYKNKE 788



 Score =  156 bits (394), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 51/167 (30%), Positives = 82/167 (49%), Gaps = 2/167 (1%)

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+        D +   I  + +L    N   +        P++IHRA+ GS+ERF+ I
Sbjct: 827 KKEFKDSQNHNEDKEHNNIHDNHSLKPNINEEGLLKKG-FERPIIIHRAILGSVERFVAI 885

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE+  G LP WLSP QAIV  I     +YA  +   L ++   ++ D    T+N KIRE
Sbjct: 886 LIEHTAGKLPFWLSPRQAIVLPIGDKYNDYANYVYETLHNNMFDVDLDTSVNTLNKKIRE 945

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV-SLLDAIPILTK 643
             +K+   I++ G+KE +  ++ +R       Q V ++ + I    K
Sbjct: 946 AQLKQFNYILVVGEKELTTNTVTLRDRDDQNNQHVYTIQELINKFNK 992



 Score = 49.4 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 9/65 (13%)

Query: 3   SDIKLTFPDGSIKNFPVH-ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIEI 61
             I +   DGSIK+   +  T  D+A SIS+ LA+ ++   +          + +  +E+
Sbjct: 207 KPITIELLDGSIKSGESYVTTPFDIALSISKRLAEDSIVCKV--------TYLEKVDVEL 258

Query: 62  ITPED 66
              E+
Sbjct: 259 CDIEE 263


>gi|78060370|ref|YP_366945.1| threonyl-tRNA synthetase, class IIA [Burkholderia sp. 383]
 gi|77964920|gb|ABB06301.1| Threonyl-tRNA synthetase, class IIa [Burkholderia sp. 383]
          Length = 477

 Score =  387 bits (993), Expect = e-105,   Method: Composition-based stats.
 Identities = 173/414 (41%), Positives = 254/414 (61%), Gaps = 15/414 (3%)

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
             DHR L  ++ LFH  ++G G++FWH +GW +++ L  Y+R +++   + EI TPQ+L 
Sbjct: 69  DIDHRILGNKLGLFHQQQEGPGMVFWHPRGWALYRVLEDYVRMRMRRAGFREIRTPQLLA 128

Query: 302 QHLWQQSGHWDSYRANMFAVKCA-------DDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
           + LW++SGHWD + + M+A+          D    D     LKPM+CP HV VFN GL+S
Sbjct: 129 RSLWERSGHWDKFGSQMYALPDRSPIEPSADVDHDDALALCLKPMSCPCHVQVFNQGLRS 188

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YRELP+R +EFG+ +R+EPSGSL GL R R F QDDAHVFCTK Q+ NE  +  NL+ ++
Sbjct: 189 YRELPIRYSEFGACHRDEPSGSLEGLKRTRAFVQDDAHVFCTKSQIENEVARFCNLLRAV 248

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           Y D GF  + V L+TRP +R G +A+WD AE            +    +   +  GEGAF
Sbjct: 249 YADLGFSSVTVALATRPMQRAGEEAVWDQAEAS------LAAAARAAGLEFELSEGEGAF 302

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK E+ L D  GR+WQCGTIQ+DF LP R NA ++N+ + +  PVM+H AV GS+ERF
Sbjct: 303 YGPKLEFKLADRRGREWQCGTIQLDFVLPGRLNAHFINAENVQETPVMLHHAVLGSMERF 362

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
           I I++E+++G LP+WL+P Q +V +I+ +   YA  +  +L    L +  D R E +  K
Sbjct: 363 IAILLEHYEGWLPVWLAPEQIVVASISDAHAPYAMRVVQMLDDAGLRVVADCRAERLERK 422

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
           I +    +IP +I  G ++    ++ IR   +     + L +AI +L+ E+  P
Sbjct: 423 IIDARKLQIPFLIAVGARDERNGTVSIRNR-NGDQVTLPLDEAITVLSCEAKAP 475


>gi|207742945|ref|YP_002259337.1| threonyl-trna synthetase protein [Ralstonia solanacearum IPO1609]
 gi|206594340|emb|CAQ61267.1| probable threonyl-trna synthetase protein [Ralstonia solanacearum
           IPO1609]
          Length = 379

 Score =  385 bits (989), Expect = e-104,   Method: Composition-based stats.
 Identities = 201/381 (52%), Positives = 270/381 (70%), Gaps = 9/381 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEII 62
            I +T PDGS + FP   T ++VA+SI   LAK A+A  I+G + D S  + +   + I+
Sbjct: 1   MIAITLPDGSRREFPGPVTVAEVAQSIGAGLAKAALAGRIDGHLVDTSFKIEQSVDLAIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   L VIRHS AH++A AV+ + P+ QV IGP+IE+GFYYDF  ++PF+ ++L  I
Sbjct: 61  TDKDADGLDVIRHSTAHLLAYAVKELHPDAQVTIGPVIENGFYYDFAYKRPFTPEDLVAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EKKM E+  +D    ++  S  +A +LFE   E YK EI+ SIP  + + LYR+G + DL
Sbjct: 121 EKKMAELAKKDEKVTREVWSRNEAVKLFEGMGEKYKAEIIASIPEDQEIGLYREGSFVDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG++K F KLMKVAGAYWRGDSN  ML RIYGTAW  +++   YL+ LEE+E
Sbjct: 181 CRGPHVPSTGKLKVF-KLMKVAGAYWRGDSNNEMLQRIYGTAWAKKEDQEAYLHMLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLD 301
           KRDHRKL +++DLFH+ E+  G++FWH KGW+I+Q +  YMR R     Y E+ TPQV+D
Sbjct: 240 KRDHRKLGKQLDLFHLQEEAPGMVFWHPKGWQIWQAVEQYMRGRLAGAGYSEVRTPQVMD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW +Y+ NMF       T  + R +A+KPMNCPGHV +FNHGL+SYR+LP+R
Sbjct: 300 RTLWEHSGHWQNYKENMFV------TESEKREYAIKPMNCPGHVQIFNHGLRSYRDLPLR 353

Query: 362 LAEFGSVYRNEPSGSLHGLMR 382
           LAEFG+ +RNEPSG+LHGL R
Sbjct: 354 LAEFGANHRNEPSGALHGLKR 374


>gi|33519811|ref|NP_878643.1| threonyl-tRNA synthetase [Candidatus Blochmannia floridanus]
 gi|33504156|emb|CAD83418.1| threonyl-tRNA synthetase [Candidatus Blochmannia floridanus]
          Length = 410

 Score =  385 bits (988), Expect = e-104,   Method: Composition-based stats.
 Identities = 185/411 (45%), Positives = 275/411 (66%), Gaps = 13/411 (3%)

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEE 293
           +   ++ +K DHR L+ ++DL+H+ ED  G++FWH  GW IFQ L +++R+K++   Y+E
Sbjct: 1   MKKNQKIKKYDHRNLSHQLDLYHLQEDAPGMVFWHVNGWTIFQELKNFIRKKLQQYQYQE 60

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           + +P ++D+ LW+++GHWD+Y  ++F       T  + R + +KPMNCPGH+ +FNHGLK
Sbjct: 61  VKSPTMIDRVLWKKTGHWDNYYEHIFT------TDSENRKYCIKPMNCPGHIQIFNHGLK 114

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           +Y++LP+R+AEFGS +RNE SGSLHGLMR+R FTQDDAH+FC   Q+ NE      ++  
Sbjct: 115 TYKDLPIRMAEFGSCHRNELSGSLHGLMRIREFTQDDAHIFCALTQIPNELYHCIKMMYD 174

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           IY  F F+KI+VKLSTRP+KR+G D++WD AE  +  VL       Q+ I       +GA
Sbjct: 175 IYHVFNFKKIIVKLSTRPKKRIGEDSVWDVAEQYLSDVLK------QNNIEFTYQPNDGA 228

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK E+IL D++ R WQCGTIQ+DF LP    + Y+++++    PV+IHRAV GSIER
Sbjct: 229 FYGPKIEFILLDSLKRSWQCGTIQLDFTLPKLLESKYIDNNNSYQTPVIIHRAVLGSIER 288

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           FIG++ E + G  P WL+PIQ I+  +T   + Y  E+A  L + +  ++ D RNETI++
Sbjct: 289 FIGVITEEYLGFFPTWLAPIQIIIMNVTDGQISYVIELAKKLSNKNFRVKIDLRNETISF 348

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIR H I +IP ++ICG+ E +++++ IR F     +   +   I  L  E
Sbjct: 349 KIRSHIIHRIPYMLICGNAEMNQKTVSIRTFRGKNFKNYKIDIFIEKLQHE 399


>gi|146340273|ref|YP_001205321.1| putative threonine tRNA synthetase (fragment) [Bradyrhizobium sp.
           ORS278]
 gi|146193079|emb|CAL77090.1| putative threonine tRNA synthetase (fragment) [Bradyrhizobium sp.
           ORS278]
          Length = 409

 Score =  384 bits (986), Expect = e-104,   Method: Composition-based stats.
 Identities = 174/409 (42%), Positives = 247/409 (60%), Gaps = 14/409 (3%)

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQV 299
            +  DHR L   +DL+HI ED  G++FWH +G  +++ L +++R K++   Y E+ TPQ+
Sbjct: 1   MDDLDHRSLGPRLDLWHIQEDAPGMVFWHPRGHALYRVLENFIRGKMRRLGYAEVRTPQL 60

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           L   LW QSGHW+ + A MFA+       +  R  ALKPM+CP HV +FN  L+S+RELP
Sbjct: 61  LPLDLWMQSGHWEKFGAQMFAL------GEGERAMALKPMSCPCHVQIFNRNLRSWRELP 114

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R AEFGS +R+EPSG+LHGLMR RGF QDDAHVFC  + +  E  +   L+  +Y  FG
Sbjct: 115 LRYAEFGSCHRDEPSGALHGLMRTRGFEQDDAHVFCRADDVAGEVARFAALLSEVYAAFG 174

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F+   V LSTRP+ R GSDA WD AE  +     +        ++  +  GEGAFYGPK 
Sbjct: 175 FDAPEVSLSTRPQLRAGSDASWDWAEQALAEAARSCG------LSYAIQPGEGAFYGPKL 228

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           E+ L+D +GR WQCGT+Q+D  LP R  A YV +H  +  PV+IH AV GSI RFI +++
Sbjct: 229 EFALRDRLGRSWQCGTVQLDSVLPERLGASYVAAHGARATPVLIHHAVLGSIGRFIAMLL 288

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E+  G LP WLSP Q  V  IT   ++ A ++  LL S  L        ET++ +I    
Sbjct: 289 EHHAGALPFWLSPDQVAVVPITRDQLDDALKLRELLFSAELRAVLSADGETLSRRIVAAH 348

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
              IP++ + G +EA++ ++ +R     TT  ++   A+  L + + PP
Sbjct: 349 AASIPVVAVVGAREAAQGTVSLRERDG-TTSVLTWDRAVSTLRERNRPP 396


>gi|134292577|ref|YP_001116313.1| threonyl-tRNA synthetase [Burkholderia vietnamiensis G4]
 gi|134135734|gb|ABO56848.1| threonyl-tRNA synthetase [Burkholderia vietnamiensis G4]
          Length = 402

 Score =  381 bits (978), Expect = e-103,   Method: Composition-based stats.
 Identities = 170/413 (41%), Positives = 243/413 (58%), Gaps = 14/413 (3%)

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQV 299
            +  DHR L  ++DLFH  ++  G IFWH +G  +++ +  Y+R R  +  + E+ TPQ+
Sbjct: 1   MDDFDHRVLGNKLDLFHQQDESPGGIFWHPRGMVLYRVIEEYIRVRMRQAGFSEVRTPQI 60

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           L + LW++SGHW+ +  NMF+++       D   + LKPM+CP HV +F  G +SYR+LP
Sbjct: 61  LSRDLWERSGHWEKFGPNMFSLE------SDRNPYCLKPMSCPCHVQIFKKGSRSYRDLP 114

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R  EFG+V+R EPSG+LHGLMR R FTQDDAHV C  +Q+ +E  +   L+ +IY DFG
Sbjct: 115 IRYCEFGAVHRAEPSGALHGLMRARAFTQDDAHVLCLPDQIEDEVARFCKLLKAIYADFG 174

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F +  V LSTRP  R G DA+WD +E +          +    +   +L GEGAFYGPK 
Sbjct: 175 FGECDVALSTRPPVRAGDDAVWDRSEAM------LASAARAAGLEFAILAGEGAFYGPKL 228

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           E+ L D  GR WQCGTIQ+DF LP R  A YV     K  PVM+H AV GS+ERFIGI++
Sbjct: 229 EFHLVDRQGRKWQCGTIQLDFVLPERLGASYVAEDGAKATPVMLHHAVLGSLERFIGILL 288

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E+++G LP WL+P Q +V  I      +A   A+  +     +  DFR E +  KI + +
Sbjct: 289 EHYEGWLPTWLAPDQIVVANIGDDHRAFADRAASAFEDIGCRVLRDFRAERLPRKIFDAT 348

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
               PI+ I G KEA    + +R  G      +++  A+  L + +  P   +
Sbjct: 349 ELAAPIVAIAGRKEALAGEVSLRMRGG-EQHVMTIDAALAFLKQHARVPSATR 400


>gi|261749266|ref|YP_003256951.1| threonyl-tRNA synthetase [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
 gi|261497358|gb|ACX83808.1| threonyl-tRNA synthetase [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
          Length = 408

 Score =  381 bits (977), Expect = e-103,   Method: Composition-based stats.
 Identities = 166/415 (40%), Positives = 246/415 (59%), Gaps = 15/415 (3%)

Query: 237 FLEESEKRDHRKLAREMDLFHIA-EDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEI 294
                   DHRK+ +++  F  +   G+G+  W  +G    + L  ++   + K  YE I
Sbjct: 2   NKYSVSNLDHRKIGKKLKFFIFSDRVGTGLPLWLPRGTIFRRNLEEFLTDIQKKSGYEMI 61

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
            TP +  + L+ +SGHWD Y  + F       T      F LKPMNCP H  V+     S
Sbjct: 62  MTPHIGHKKLYVRSGHWDKYGKDSFK---PIQTPHSEEEFLLKPMNCPHHCEVYRSQEWS 118

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YR+LP R AEFG+VYR E SG LHGL RVR FTQDDAH+FCT +Q+  E  K+ NL+  +
Sbjct: 119 YRDLPKRFAEFGTVYRYEQSGELHGLTRVRCFTQDDAHIFCTYDQLLEEFKKVINLVFYV 178

Query: 415 YKDFGFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
           ++  GF +  +++S R        +GSD  W+ AEN +   +       +++++  +  G
Sbjct: 179 FRRLGFLEYTIRVSLRDPKKIHNYIGSDKNWEMAENAIIQAVK------EEKLDASLHYG 232

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           E AFYGPK ++++KD++ R+WQ GTIQVD+NLP RF+ +Y   ++E+  PVMIHRA  GS
Sbjct: 233 EAAFYGPKLDFLIKDSLDRNWQLGTIQVDYNLPERFDLYYKGKNNERHRPVMIHRAPLGS 292

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
           +ER I I+IE+ KGNLPLWL P QA++  I+   + YA++I NL+ +H++ +  D RNE 
Sbjct: 293 LERLIAILIEHTKGNLPLWLVPNQAVILPISDKYIIYAKKILNLMLNHNIRVFLDERNEK 352

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           I+ KIR+    KIP +II G+KE   + I +RR G       ++ + I  + KE+
Sbjct: 353 IDKKIRDSEENKIPYMIILGEKEEKNKMISLRRHGLGHIGIFTISNGIDAIFKET 407


>gi|26553728|ref|NP_757662.1| threonyl-tRNA synthetase [Mycoplasma penetrans HF-2]
 gi|26453735|dbj|BAC44066.1| threonyl-tRNA synthetase [Mycoplasma penetrans HF-2]
          Length = 566

 Score =  380 bits (976), Expect = e-103,   Method: Composition-based stats.
 Identities = 168/579 (29%), Positives = 299/579 (51%), Gaps = 31/579 (5%)

Query: 73  IRHSCAHIMAEAVQS-IWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIA 131
           + ++ A I  +AVQ  +  + ++A   ++E GF+ +F   Q  SS + ++IEK+M+++I+
Sbjct: 7   LNNTAAQIAFKAVQRILKDDFEIASSGMLEYGFFIEFKTSQSISSKDFSKIEKEMKKVIS 66

Query: 132 RDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRST 191
                  +  S     +  +  KE  K             T  + G+ F+      +   
Sbjct: 67  SGEKIE-EIKSLNSINKYQKVFKEENK-----------ESTFIKIGKDFENVSAFEIEDN 114

Query: 192 GQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAR 251
               K FKL  + G+YW+ +++   L+RI G A+ T++EL ++  ++EE + RDHRK+ +
Sbjct: 115 VNKVKIFKLTNIGGSYWQNNASLDQLTRISGVAFTTKEELEEWDKYMEEIKSRDHRKIGQ 174

Query: 252 EMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHLWQQSG 309
           +M++F  + D G G+  W   G  I + +  ++      + +  I+TP +  + L+ +SG
Sbjct: 175 DMEIFDFSNDIGQGLPIWLPNGEIIKKEIKKFLWSIFSKEKFLFIDTPILGSKELYIKSG 234

Query: 310 HWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVY 369
           HW+ Y+ N F     D+      TF L+PM CP H+  FN    SY+ELP  + E   ++
Sbjct: 235 HWEHYKENNFPPMEVDN-----ETFMLRPMTCPHHLTYFNLKPHSYKELPYAICEDSKLH 289

Query: 370 RNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
           R E SG L GL RVR     D H+    +Q+ +   +++N++  ++K    +   V LS 
Sbjct: 290 RYESSGGLIGLERVRTMELFDCHIITKPDQIEDVIRQLNNILKIVHKRMNIKIDRVDLSL 349

Query: 430 RPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKD 485
           R  K        D +W  +E  ++ +L  +   + +      + GE AFYGPK ++ +K 
Sbjct: 350 RDPKDKVKYHDDDKMWKSSEKQLRDILKKLNYKAME------IEGEAAFYGPKIDFQVKT 403

Query: 486 AIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
            +G+     TIQ+DF LP RF+  Y++ ++ K  PV+IH  V G+ ERFI  ++   KG 
Sbjct: 404 NLGKIITISTIQLDFLLPERFDVEYIDENNTKKRPVLIHFGVIGTYERFIATLLSQTKGL 463

Query: 546 LPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
           LP WL+P+Q  +  + ++  ++Y ++IA+ L+ +++ ++ D  NE +  KIRE  I KIP
Sbjct: 464 LPFWLAPVQISIIPVNNNIHLDYCKKIASELEENNIRVKLDDSNERLAKKIREAQISKIP 523

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             ++ GD E     I  R++    +  +   + I  + K
Sbjct: 524 FQLVIGDNEIKNNEITYRKYSEENSTTLKFNEFIDFIKK 562


>gi|326926536|ref|XP_003209455.1| PREDICTED: probable threonyl-tRNA synthetase 2, cytoplasmic-like,
           partial [Meleagris gallopavo]
          Length = 635

 Score =  380 bits (976), Expect = e-103,   Method: Composition-based stats.
 Identities = 161/442 (36%), Positives = 241/442 (54%), Gaps = 16/442 (3%)

Query: 3   SDIKLTFPDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIE 60
             IK+T  DG I +      T   +A  IS+ LA  AV   +NG++ DL  P+  + ++E
Sbjct: 60  KPIKITLTDGKIVDGESWKTTPYQLAVGISQGLASNAVIAKVNGELWDLDRPLEGDCTLE 119

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDEL 119
           ++T +D  + AV  HS AHI+ EA++  +    +  GP IE+GFYYD   E +  SS E 
Sbjct: 120 LLTFDDEEAQAVYWHSSAHILGEAMEGFYGGC-LCYGPPIENGFYYDMYIEDRGVSSTEF 178

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             +E + + II    PF +  +  E   ++F+     +K  IL         T+YR G  
Sbjct: 179 PALENRCKNIIKEKQPFERLEVKKEILLDMFKY--NKFKCRILNEKVNTPTTTVYRCGPL 236

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            DLCRGPHVR TG++K   K+ K +  YW G ++   L RIYG ++   + + ++  F E
Sbjct: 237 IDLCRGPHVRHTGKIK-ALKIFKNSSTYWEGKADMETLQRIYGISFPDNKMMKEWEKFQE 295

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+  RDHRK+ +E +LF   +   G  F+  +G  ++ TL  ++R +    ++ E+ +P 
Sbjct: 296 EARNRDHRKIGKEQELFFFHDLSPGSCFFLPRGAFLYNTLTDFIREEYHKRNFTEVVSPN 355

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           + +  LW+ SGHW  Y  NMF+         +  TFALKPMNCPGH  +F H  +S+RE+
Sbjct: 356 IFNSKLWETSGHWQHYSENMFSF------DIEKETFALKPMNCPGHCLMFAHRPRSWREM 409

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI-HNLIISIYKD 417
           P+RLA+FG ++RNE SG+L GL RVR F QDDAH+FCT EQ     + I     +  Y  
Sbjct: 410 PLRLADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCTIEQXXXXXIDIKIKDALGRYHQ 469

Query: 418 FGFEKIMVKLSTRPE-KRVGSD 438
               ++  +L  R     VG D
Sbjct: 470 CATIQLDFQLPIRFNLTYVGKD 491



 Score =  196 bits (498), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 61/167 (36%), Positives = 93/167 (55%), Gaps = 2/167 (1%)

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE-KCHPVMIHRAVFGSIERFIGI 537
            +  +KDA+GR  QC TIQ+DF LP RFN  YV    + K  PV+IHRAV GS+ER I I
Sbjct: 456 IDIKIKDALGRYHQCATIQLDFQLPIRFNLTYVGKDGDDKKRPVIIHRAVLGSVERMIAI 515

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FRNETINYKIR 596
           + EN+ G  P WLSP Q +V  +  ++  YAQ++           + D  ++ T+N KIR
Sbjct: 516 LAENYGGKWPFWLSPRQVMVVPVGPTSEGYAQQVCTEFFEAGFMTDVDLDQSCTLNKKIR 575

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              + +   I++ G+KE +  ++ +R   +    ++ +  AI  L K
Sbjct: 576 NAQLAQYNFILVVGEKEKANHAVNVRTRDNKVHGEILVSSAIEKLKK 622


>gi|284931186|gb|ADC31124.1| threonyl-tRNA synthetase [Mycoplasma gallisepticum str. F]
          Length = 573

 Score =  380 bits (976), Expect = e-103,   Method: Composition-based stats.
 Identities = 155/582 (26%), Positives = 284/582 (48%), Gaps = 24/582 (4%)

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQIEKKMQEIIA 131
             ++   ++   ++   P ++     + + GFY D+  +    + ++  ++ K + ++ +
Sbjct: 4   YFNTALLMVQMILKKQDPSIKFGQMSVNDQGFYLDYLSQTLNINPEDFNKLIKSLAKLCS 63

Query: 132 RDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRST 191
              P   + +  + A +L     + Y +E++     K           + L     V +T
Sbjct: 64  SAQPISLKTVDLKIANQL--LSDQPYLLELINEAKEKTVNLATVDNHHYYLPMAQLVDNT 121

Query: 192 GQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAR 251
             VK F     V GAY++GD +  ++ R+ G  +   + +  YL  +EE ++RDHR++ +
Sbjct: 122 KLVKAFN-FQSVGGAYFKGDKDNLVMVRLNGFGFENDKVMQDYLEIIEEQKQRDHRRINK 180

Query: 252 EMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSG 309
            ++LF      G G+  W   G  + Q +  Y+   + K  +  +NTP + +  L+++SG
Sbjct: 181 ILELFTFNQLAGPGMPIWLPNGQIVRQLIGDYVHSVQKKFGFMAVNTPILGNVDLYKKSG 240

Query: 310 HWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVY 369
           H++ Y  +MF     +  + D     L+PM CP H  V+ +  ++Y +LP+RL+E   ++
Sbjct: 241 HYNHYAKDMFP----ELALLDGDKMMLRPMTCPHHCLVYLNKPRNYYDLPMRLSEDALLH 296

Query: 370 RNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
           R E SG L GL RVR  T  D H+FC  +Q+  E L  + +I  +   F  +   + LS 
Sbjct: 297 RYEASGGLTGLERVRAMTLLDNHIFCRLDQIKTEILNAYQVIKEVIGTFNLKFHRIDLSL 356

Query: 430 RPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKD 485
                    + ++ +W  +EN ++  L  +       +     +GE AFYGPK ++ +K 
Sbjct: 357 HDPNDKQSFIDNEQMWARSENQLEDALKDLG------LEYTKQVGEAAFYGPKIDFQVKT 410

Query: 486 AIGRDWQCGTIQVDFNLP--SRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           A+ +     TIQ+DF+LP   +F+  Y    +     V+IH  + G+ ERF+  ++E  K
Sbjct: 411 ALNKIITVSTIQLDFSLPSEEKFDIKYKTKDNTYEQGVIIHLGIIGTYERFVATLLEQTK 470

Query: 544 GNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
           G L LWL+P QA++  + +S  +E   ++   L +  L +  D R+E +N KIR+H + K
Sbjct: 471 GALDLWLAPKQAVIIPVNNSVHLEGCNQLLEKLLAKDLRVTVDSRDERLNKKIRDHQVNK 530

Query: 603 IPIIIICGDKEASE-RSIGIRRFGSTTTQKVSLLDAIPILTK 643
           IP+ II GD E      I  R +G   + ++ L   I +  K
Sbjct: 531 IPVQIIVGDNELKNPDLITYRLYGQEDSNQLELTKFIELFKK 572


>gi|255066457|ref|ZP_05318312.1| threonine--tRNA ligase [Neisseria sicca ATCC 29256]
 gi|255049337|gb|EET44801.1| threonine--tRNA ligase [Neisseria sicca ATCC 29256]
          Length = 322

 Score =  380 bits (976), Expect = e-103,   Method: Composition-based stats.
 Identities = 163/318 (51%), Positives = 220/318 (69%), Gaps = 7/318 (2%)

Query: 327 TIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
           T  + R +A+KPMNCPGHV +FN+GL+SYR+LP+RLAEFGS +RNEPSG+LHGLMRVRGF
Sbjct: 4   TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALHGLMRVRGF 63

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
            QDDAH+FCT++Q+ +E    + L++ IYK FGF  + VKLS RPEKR GSD +WD AE 
Sbjct: 64  VQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFHDVSVKLSLRPEKRAGSDDVWDKAEQ 123

Query: 447 IMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF 506
            ++  L          +    L GEGAFYGPK EY +KDA+GR WQCGT+Q+DF LP R 
Sbjct: 124 GLREALTACG------VEWDELPGEGAFYGPKIEYHVKDALGRSWQCGTLQLDFVLPERL 177

Query: 507 NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVE 566
           +A YV  ++++  PVM+HRA+ GS+ERFIGI+IEN  G+ PLWL+P+Q ++  IT +  +
Sbjct: 178 DAEYVTENNDRARPVMLHRAILGSLERFIGILIENHAGSFPLWLAPVQMVIMNITENQAD 237

Query: 567 YAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS 626
           Y +E+A  L++    +E D RNE I YKIR++S  + P  I+ GDKE  E  + +R   +
Sbjct: 238 YCREVAAKLQAAGFRVELDLRNEKIGYKIRDNSQYRFPYQIVVGDKEKQENKVAVR-RKA 296

Query: 627 TTTQKVSLLDAIPILTKE 644
                + L D I  L +E
Sbjct: 297 EDLGSLDLDDFIAQLQQE 314


>gi|167589762|ref|ZP_02382150.1| tRNA synthetase, class II (G, H, P and S) [Burkholderia ubonensis
           Bu]
          Length = 406

 Score =  380 bits (976), Expect = e-103,   Method: Composition-based stats.
 Identities = 174/409 (42%), Positives = 246/409 (60%), Gaps = 14/409 (3%)

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQV 299
            +  DHR L  ++DLFH  ++  G +FWH +G  +++ +  Y+R ++ +  + E+ TPQ+
Sbjct: 1   MDAFDHRVLGNKLDLFHQQDESPGAVFWHPRGMALYRVVEEYIRERMRQAGFAEVRTPQI 60

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             + LW+QSGHW+ +  NMF++        D + F LKPM+CP HV VF  G +SYR+LP
Sbjct: 61  ASRALWEQSGHWEKFGRNMFSL------DSDGQPFCLKPMSCPCHVQVFKRGSRSYRDLP 114

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           VR +EFG+V+R EPSGSLHGLMR R FTQDDAHV C ++Q+  E  +   L+ +IY DFG
Sbjct: 115 VRYSEFGAVHRAEPSGSLHGLMRARAFTQDDAHVLCMEDQVEAEVARFCRLLKTIYADFG 174

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F++  V LSTRP  R G DALWD +E+++     +        ++  +  GEGAFYGPK 
Sbjct: 175 FDRFDVALSTRPSVRAGDDALWDRSESMLALAARSAG------LHFEIQQGEGAFYGPKL 228

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           E+ L D  GR WQCGTIQ+DF LP R  A YV+    K  PVM+H AV GS+ERFIGI++
Sbjct: 229 EFHLLDRQGRKWQCGTIQLDFVLPERLGATYVSESGAKATPVMLHHAVLGSLERFIGILL 288

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E+ +G LP WL+P Q +V  I   A  +A   A   ++    +  DFR E +  KI +  
Sbjct: 289 EHHEGWLPTWLAPDQIVVANIGDEARPFADSAALAFETIGCRVLRDFRPERLPRKIFDAR 348

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
               PI  + G KEA   ++ +R   +     +S+ DA+  L K    P
Sbjct: 349 ELAAPIFAVAGPKEAQSGAVSLRLR-NGERHALSIGDALAYLEKRVCAP 396


>gi|31544379|ref|NP_852957.1| threonyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)]
 gi|81572846|sp|Q7NBT5|SYT_MYCGA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|31541223|gb|AAP56525.1| threonyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)]
 gi|284930421|gb|ADC30360.1| threonyl-tRNA synthetase [Mycoplasma gallisepticum str. R(high)]
          Length = 573

 Score =  380 bits (975), Expect = e-103,   Method: Composition-based stats.
 Identities = 155/582 (26%), Positives = 284/582 (48%), Gaps = 24/582 (4%)

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQIEKKMQEIIA 131
             ++   ++   ++   P ++     + + GFY D+  +    + ++  ++ K + ++ +
Sbjct: 4   YFNTALLMVQMILKKQDPSIKFGQMSVNDQGFYLDYLSQTLNINPEDFNKLIKSLAKLCS 63

Query: 132 RDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRST 191
              P   + +  + A +L     + Y +E++     K           + L     V +T
Sbjct: 64  SAQPISLKTVDLKIANQL--LSDQPYLLELINEAKEKTVNLATVDNHHYYLPMAQLVDNT 121

Query: 192 GQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAR 251
             VK F     V GAY++GD +  ++ R+ G  +   + +  YL  +EE ++RDHR++ +
Sbjct: 122 KLVKAFN-FQSVGGAYFKGDKDNLVMVRLNGFGFENDKVMQDYLEIIEEQKQRDHRRINK 180

Query: 252 EMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSG 309
            ++LF      G G+  W   G  + Q +  Y+   + K  +  +NTP + +  L+++SG
Sbjct: 181 ILELFTFNQLAGPGMPIWLPNGQIVRQLIGDYVHSVQKKFGFMAVNTPILGNVDLYKKSG 240

Query: 310 HWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVY 369
           H++ Y  +MF     +  + D     L+PM CP H  V+ +  ++Y +LP+RL+E   ++
Sbjct: 241 HYNHYAKDMFP----ELALLDGDKMMLRPMTCPHHCLVYLNKPRNYYDLPMRLSEDALLH 296

Query: 370 RNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
           R E SG L GL RVR  T  D H+FC  +Q+  E L  + +I  +   F  +   + LS 
Sbjct: 297 RYEASGGLTGLERVRAMTLLDNHIFCRLDQIKTEILNAYQVIKEVIGTFNLKFHRIDLSL 356

Query: 430 RPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKD 485
                    + ++ +W  +EN ++  L  +       +     +GE AFYGPK ++ +K 
Sbjct: 357 HDPNDKQSFIDNEQMWARSENQLEDALKDLG------LEYTKQVGEAAFYGPKIDFQVKT 410

Query: 486 AIGRDWQCGTIQVDFNLP--SRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           A+ +     TIQ+DF+LP   +F+  Y    +     V+IH  + G+ ERF+  ++E  K
Sbjct: 411 ALNKIITVSTIQLDFSLPSEEKFDIKYKTKDNTYEQGVIIHLGIIGTYERFVATLLEQTK 470

Query: 544 GNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
           G L LWL+P QA++  + +S  +E   ++   L +  L +  D R+E +N KIR+H + K
Sbjct: 471 GALDLWLAPKQAVIIPVNNSVHLEGCNQLLEKLLARDLRVTVDSRDERLNKKIRDHQVNK 530

Query: 603 IPIIIICGDKEASE-RSIGIRRFGSTTTQKVSLLDAIPILTK 643
           IP+ II GD E      I  R +G   + ++ L   I +  K
Sbjct: 531 IPVQIIIGDNELKNPDLITYRLYGQEDSNQLELTKFIELFKK 572


>gi|158340035|ref|YP_001521204.1| threonyl-tRNA synthetase [Acaryochloris marina MBIC11017]
 gi|158310276|gb|ABW31891.1| threonyl-tRNA synthetase [Acaryochloris marina MBIC11017]
          Length = 439

 Score =  379 bits (974), Expect = e-103,   Method: Composition-based stats.
 Identities = 171/420 (40%), Positives = 261/420 (62%), Gaps = 14/420 (3%)

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEI 294
               E++  DHR+LAR+MDLFH  E   G++FWH +G ++F+++  +MR+  +   +EE+
Sbjct: 26  QTTGETKMADHRELARDMDLFHFEEHSPGMVFWHPQGLRLFRSIEDFMRQVYQGHGFEEV 85

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR-------TFALKPMNCPGHVAV 347
            +P  L++ LW++S HW+ +R  MF V   +  I D          +ALKPM+CP H+A+
Sbjct: 86  RSPIALNRSLWERSRHWEKFRQGMFVVGSVEADIDDESALSVISPDYALKPMSCPAHIAI 145

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
           +    +SYRE P+RL EFG  +RNE SG+L G MR+R F QDDAH+FC    +  E    
Sbjct: 146 YQSRKRSYRENPMRLMEFGICHRNELSGTLSGCMRLRQFVQDDAHIFCRASDVQREISNF 205

Query: 408 HNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGV 467
            N++  +Y  FG+++  +++S RPE+R+GSD LWD AE+++   + ++ +S        +
Sbjct: 206 LNMVQQVYVAFGYDQFSLQISLRPEQRLGSDHLWDQAESVLVKAVQSLGHS------YKL 259

Query: 468 LLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAV 527
              EGAFYGPK E  L+D +GR WQCGTIQVDFNLP  F   +VN   E   PVM+H+A+
Sbjct: 260 APNEGAFYGPKLEISLQDQLGRSWQCGTIQVDFNLPQVFELAFVNELGELERPVMLHQAI 319

Query: 528 FGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR 587
            GS+ER+IGI++E+  G LP+W +P Q  V +I++ A  +A+ I   L+     +E   +
Sbjct: 320 LGSLERWIGILLEHHSGALPIWAAPTQVAVASISNKASAWAETIFFRLRQLGARVELHNQ 379

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLP 647
           N TI+ KIR  S +KIP+I I G++EA  + + +R  G+   Q++SL +    L   S+P
Sbjct: 380 NRTISKKIRGLSKRKIPLIAIVGEQEAMSQRLNLRCLGALKQQEMSLAELEQKLADLSMP 439


>gi|60416072|gb|AAH90718.1| Zgc:92586 protein [Danio rerio]
          Length = 359

 Score =  378 bits (971), Expect = e-102,   Method: Composition-based stats.
 Identities = 149/358 (41%), Positives = 211/358 (58%), Gaps = 15/358 (4%)

Query: 288 KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
           K  ++E+ TP + +  LWQ SGHW  Y  NMF+ +       +   FALKPMNCPGH  +
Sbjct: 2   KRGFQEVVTPNIYNSKLWQTSGHWQHYSENMFSFEV------EKEIFALKPMNCPGHCLM 55

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
           F+H  +S+RELP+RLA+FG ++RNE SG+L GL RVR F QDDAH+FC+ +Q+ +E    
Sbjct: 56  FDHRPRSWRELPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCSMDQIESEIKGC 115

Query: 408 HNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGV 467
            + + ++Y  FGF   +  LSTRPEK +G   +WD AE  ++  L+             +
Sbjct: 116 LDFLRTVYDVFGFTFKLN-LSTRPEKFLGEPEVWDQAEKQLENSLNDFGEKW------VL 168

Query: 468 LLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRA 526
             G+GAFYGPK +  +KDAIGR  QC TIQ+DF LP RFN  +V+    +K  PV+IHRA
Sbjct: 169 NPGDGAFYGPKIDIQIKDAIGRYHQCATIQLDFQLPIRFNLTFVSHDGDDKKRPVIIHRA 228

Query: 527 VFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF 586
           + GS+ER I I+ EN+ G  PLWLSP Q +V  I  +  EYAQ +        L  + D 
Sbjct: 229 ILGSVERMIAILTENYGGKWPLWLSPRQVMVVPIGPTCDEYAQRVQKEFHKVGLMTDVDL 288

Query: 587 R-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
               T+N KIR   + +   I++ G+KE S  ++ +R   +    + SL D +  L +
Sbjct: 289 DPGCTLNKKIRNAQLAQYNFILVVGEKEKSSDTVNVRTRDNKVHGERSLTDCMERLKQ 346


>gi|187921760|ref|YP_001890792.1| threonyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
 gi|187720198|gb|ACD21421.1| threonyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
          Length = 404

 Score =  377 bits (969), Expect = e-102,   Method: Composition-based stats.
 Identities = 173/409 (42%), Positives = 255/409 (62%), Gaps = 12/409 (2%)

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQV 299
               DHR +  ++DLFH  E+G G++FWH +GW++++ L  Y+R +++   + EI TPQ+
Sbjct: 1   MNDIDHRVIGNKLDLFHQQEEGVGMVFWHPRGWELYRVLEVYVRARMRRAGFREIRTPQL 60

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           L + LW++SGHW+ + A M+++  A+    + R   LKPM+CP HV VFN  ++SYRELP
Sbjct: 61  LARSLWEKSGHWEKFGAAMYSLADAE----EGRALCLKPMSCPCHVQVFNQRVRSYRELP 116

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           VR +EFG+ +R+EPSGSL GL R R F QDDAHVFCT+ Q+  E  +   L+ ++Y D G
Sbjct: 117 VRYSEFGACHRDEPSGSLEGLKRTRAFVQDDAHVFCTEAQIEVEVGRFCALLRTVYADLG 176

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F +  V L+TRP  R G D  WD AE+           +    +   VL GEGAFYGPK 
Sbjct: 177 FPRFKVALATRPAMRAGDDQTWDRAEDA------LANAARAAGLEFEVLEGEGAFYGPKL 230

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           E+ L D+  R WQCGTIQ+DF LP R +A +VN  +E+  PVMIH AV GS+ERFI +++
Sbjct: 231 EFHLLDSRARSWQCGTIQLDFVLPERLDAEFVNERNERERPVMIHHAVLGSMERFIAMLL 290

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E+ +G LP+WL+P Q +V TI+ +   YAQE+   L    +    D R E +  KI +  
Sbjct: 291 EHHEGWLPVWLAPEQVVVATISETNRAYAQEVMQALDDAGVRAVLDSRPERLEKKIVDAR 350

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
            K++P++++ G ++  +++I IR         VS ++A+  L   +L P
Sbjct: 351 EKQVPLLVVVGSRDERDQTISIRLRDGRQM-TVSFVEAVERLRSMALTP 398


>gi|325527705|gb|EGD04994.1| threonyl-tRNA synthetase [Burkholderia sp. TJI49]
          Length = 406

 Score =  377 bits (967), Expect = e-102,   Method: Composition-based stats.
 Identities = 170/411 (41%), Positives = 247/411 (60%), Gaps = 14/411 (3%)

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQV 299
            +  DHR L  +++LFH  ++  G IFWH +G  + + +  Y+R ++ +  + E+ TPQ+
Sbjct: 1   MDDCDHRVLGNKLELFHQQDESPGAIFWHPRGMVLLRVVEDYIRARMRQAGFSEVRTPQI 60

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           + + LW+QSGHW+ +   MF+++       D R + LKPM+CP HV +F  G++SYR+LP
Sbjct: 61  IARSLWEQSGHWEKFGRGMFSLQ------SDDRPYCLKPMSCPCHVQIFRKGVRSYRDLP 114

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           VR +EFG+V+R EPSG+LHGLMR R FTQDDAHV C  +Q+  E  +   L+ SIY DFG
Sbjct: 115 VRYSEFGAVHRAEPSGALHGLMRARAFTQDDAHVLCRPDQVEAEVARFCMLLKSIYADFG 174

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F    V LSTRP  R G +A+WD AE +          +    ++  V  GEGAFYGPK 
Sbjct: 175 FGGFDVALSTRPAVRAGDEAVWDRAEAM------LASAARAAGLDFSVRAGEGAFYGPKL 228

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           E+ L D  GR WQCGTIQ+DF LP R  A YV     +  PVM+H AV GS+ERFIG+++
Sbjct: 229 EFHLLDRQGRQWQCGTIQLDFVLPERLGAAYVAEDGARAVPVMLHHAVLGSLERFIGVLL 288

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E+++G LP WL+P Q +V  I      +A  +A+  ++    +  DFR E +  KI +  
Sbjct: 289 EHYEGWLPTWLAPDQIVVANIGHDERAFADRVASAFEAIGCRVLRDFRAERLPRKIFDAR 348

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDC 650
               PI+ + G KEA   ++ +R   +  +Q +SL DA+  L + +  P  
Sbjct: 349 ALAAPIVAVTGRKEALAGAVSLRMR-NGESQVLSLADALAHLKQHAHAPSA 398


>gi|164659836|ref|XP_001731042.1| hypothetical protein MGL_2041 [Malassezia globosa CBS 7966]
 gi|159104940|gb|EDP43828.1| hypothetical protein MGL_2041 [Malassezia globosa CBS 7966]
          Length = 815

 Score =  377 bits (967), Expect = e-102,   Method: Composition-based stats.
 Identities = 194/718 (27%), Positives = 295/718 (41%), Gaps = 122/718 (16%)

Query: 22  TGSDVAESISR---SLAKKAVAVAIN-GKVCDLSDPVREGSIEIITP-----EDPRSLAV 72
           TG  VA  +       A   V    N G+   L D + + ++  +T      +D  +   
Sbjct: 42  TGRPVAHVLQEVCSGDAGSYVVARDNHGRPLSLGDSI-DSTLSSLTFLPFEADDKLAQRT 100

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIE----------DGFYYDFD----------KEQ 112
              S A+++  A+  +     +   P ++           G+  +F            E 
Sbjct: 101 FWLSSAYVLTIALSRV-CGPIICDIPSVKESSGAHADGISGYVVEFLRVPSLPTIELGEH 159

Query: 113 PF--------------------------SSDELAQIEKKMQEIIARDSPFLKQYLSHEKA 146
            F                          S +E++ +++ M+++ A+   F    ++ ++A
Sbjct: 160 SFRELRAQVEQSIQILVDEQRQVGAPKVSPEEVSSVDQFMKQLCAKSFDFQIARVNWKEA 219

Query: 147 RELFESKKEAYKVEILESIPAKE----NVTLYRQGEWFDLCRGPHVRSTGQVKKFF---K 199
                 K     +  + S   ++     V +  +           +R T  +K       
Sbjct: 220 --WSLFKHNPLLLRSIVSYGEQDALVPVVYMGHEACGVLPLNEVLLRRTKPIKAAKVLGW 277

Query: 200 LMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIA 259
                      D +   L R+ G ++ + Q+L QY   + E EK DHR L     LF   
Sbjct: 278 STSSLPVAGMSDESTQPLLRVRGISFPSAQDLQQYSARMSELEKSDHRHLGIAQGLFFAH 337

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANM 318
           +   G  F    G ++ + +   +R       Y+E+ TPQ+    LW+QSGHW+ YR +M
Sbjct: 338 DSSPGSPFVMPHGMRLLRKVERVIRDLYDTFGYDEVQTPQLFRSSLWKQSGHWEKYREDM 397

Query: 319 FAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLH 378
           F+ +           F LKPMNCPGH  +F H  +SYRELP+RLAEF  ++RNE SG+L 
Sbjct: 398 FSAQGFSCCGAHDDVFGLKPMNCPGHCVMFAHQPRSYRELPMRLAEFSPLHRNEASGALS 457

Query: 379 GLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV-KLSTRPEKRVGS 437
           GL RVR F QDDAHVFCT  Q+  E   + +++   Y+ FGF       LSTRP   +G 
Sbjct: 458 GLTRVRRFHQDDAHVFCTPAQVATEIESMLHMLSLAYRVFGFGDRFELVLSTRPPNFLGQ 517

Query: 438 DALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ 497
              WD AE  +K  LD             +  G+GAFYGPK +  L DA+GR  Q  TIQ
Sbjct: 518 VEAWDHAEASLKEALDASGKPW------TLNEGDGAFYGPKIDIRLVDAMGRKHQTATIQ 571

Query: 498 VDFNLPSRFNAFYVNSHSEK---------CHPVMIHRAVFGSIERFIGIMIENFKGNLPL 548
           +DF LP RF   Y  S               PVMIHRA+ GS ERF+ I++E  KG  P 
Sbjct: 572 LDFQLPERFGLEYATSSQVPSTEQVRPGYARPVMIHRAILGSFERFLAILVEQCKGWWPF 631

Query: 549 WLSPIQAIVTT-------ITSSAVEYAQEIANLLKSHHL--------------------- 580
           WLSP QA+V            +  +YA  +   L  H                       
Sbjct: 632 WLSPRQAVVIPAFSGNEETHQAVADYAAHVQYTLSGHTHETRETRSPFLSPTMAHQTLQV 691

Query: 581 ----SIETDF-------RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGST 627
                 + +          +T+  K+R   + +    +I G +EA  R++ +R     
Sbjct: 692 PSRTRFQIELPPQSLVPAGDTLGKKVRHAQLSRFNFFLIVGPQEAKNRTVSVRMRDEK 749


>gi|221122393|ref|XP_002164939.1| PREDICTED: similar to threonyl-tRNA synthetase, partial [Hydra
           magnipapillata]
          Length = 801

 Score =  376 bits (965), Expect = e-102,   Method: Composition-based stats.
 Identities = 158/450 (35%), Positives = 241/450 (53%), Gaps = 15/450 (3%)

Query: 3   SDIKLTFPDGSIKN-FPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIE 60
           S IK+   DG   +     +T   +A+ IS+ LA  AV   +NG++ DL   +  +  IE
Sbjct: 77  SPIKIVLLDGKEIDGLAWQSTPYHIAQGISQGLADNAVIAKVNGELWDLDRVLEGDCKIE 136

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            +  E      V  HS AHI+ EA++  +    +  GP IE+GFYYD   E+  S+ +  
Sbjct: 137 FLKFEQTEGQQVFWHSSAHILGEAMERHYGGC-LCYGPPIEEGFYYDMWTEKLVSTHDFG 195

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            +E  ++ +I    PF +  +  E   ++FE     +K+ I+         T+YR G   
Sbjct: 196 NLETLIKNVIKDKQPFERLEMKKEDLLKMFEY--NEFKLRIINEKITTPTTTVYRCGPLI 253

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPHVR TG+VK    + K +  YW G+ +   L RIYG ++   + L ++ +F EE
Sbjct: 254 DLCRGPHVRHTGKVK-AMAVTKNSATYWEGNKDAETLQRIYGISFPNDKLLKEWKHFQEE 312

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQV 299
           + KRDHRK+ +E +LF   +   G  F+  KG  I+ TL+S++R +     ++E+ TP +
Sbjct: 313 AAKRDHRKIGKEQELFFFNDLSPGSAFFLPKGAFIYNTLVSFIRSEYNNRGFQEVITPNM 372

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               LW+QSGHW  Y  NMF+ +       +   FALKPMNCPGH  +FN+  +S+RELP
Sbjct: 373 FSTKLWEQSGHWQHYATNMFSFEV------EKERFALKPMNCPGHCVMFNNRPRSWRELP 426

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH-NLIISIYKDF 418
           +R A+FG ++RNE SG+L GL RVR F QDDAH+FCT +Q+F              ++  
Sbjct: 427 LRFADFGVLHRNELSGTLTGLTRVRRFQQDDAHIFCTMDQVFKRVETFQEEAAKRDHRKI 486

Query: 419 GFEKIMVK-LSTRPEKRVGSDALWDDAENI 447
           G  +   +         + S  LW+ + + 
Sbjct: 487 GKSEYNNRGFQEVITPNMFSTKLWEQSGHW 516



 Score =  132 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 61/152 (40%), Positives = 84/152 (55%), Gaps = 8/152 (5%)

Query: 285 RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
                 ++E+ TP +    LW+QSGHW  Y  NMF+ +       +   FALKPMNCPGH
Sbjct: 490 EYNNRGFQEVITPNMFSTKLWEQSGHWQHYATNMFSFEV------EKERFALKPMNCPGH 543

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM--FN 402
             +FN+  +S+RELP+R A+FG ++RNE SG+L GL RVR F QDDAH+FCT +Q     
Sbjct: 544 CVMFNNRPRSWRELPLRFADFGVLHRNELSGTLTGLTRVRRFQQDDAHIFCTMDQDEVLK 603

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
             + I  +I S    F      +      +  
Sbjct: 604 RIISIVLMIASKNIAFRGSSDRIFPEKNGKFF 635


>gi|254568978|ref|XP_002491599.1| Mitochondrial threonyl-tRNA synthetase [Pichia pastoris GS115]
 gi|238031396|emb|CAY69319.1| Mitochondrial threonyl-tRNA synthetase [Pichia pastoris GS115]
          Length = 461

 Score =  375 bits (962), Expect = e-101,   Method: Composition-based stats.
 Identities = 159/458 (34%), Positives = 244/458 (53%), Gaps = 23/458 (5%)

Query: 204 AGAYWRGDSNRPMLSRIYGTAWNTQQEL-TQYLYFLEESEKRDHRKLAREMDLFHIAEDG 262
               +     R  L+                Y      S   ++  +A +  L+ I  + 
Sbjct: 3   YSLQFMIKPPRNCLTSFTRIPKPKYSNFIKCYSNEAPASSATNNMSIALKQQLYMIDSNS 62

Query: 263 SGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
            G +F+   G ++F  L+ +M+ ++ K  ++E+ TP +  + LW+ SGHWD+Y+ +M+ V
Sbjct: 63  PGSVFFLPHGTRLFNKLVQFMKIQQKKHGFDEVITPLIYKKKLWEISGHWDNYKEDMYRV 122

Query: 322 K---CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLH 378
           +    +    KD  TF LKPMNCPGH  ++    +S  ELP+R +++ S++RNE SG+L 
Sbjct: 123 EGNEVSHGDAKDEETFGLKPMNCPGHCLIYKRFDRSINELPIRYSDWSSLHRNEASGALT 182

Query: 379 GLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD 438
           GL RVR F QDD H+FCT+EQ+  E +K  +LI  +Y  FG     + LSTRP+  VG+ 
Sbjct: 183 GLTRVRRFHQDDGHIFCTQEQISAEIMKTLHLIKLVYGVFGLSDYTLMLSTRPDNYVGTL 242

Query: 439 ALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
             W+ AE  +K VLD +  SS       +  G+GAFYGPK + + +D   R+ Q GTIQ+
Sbjct: 243 EEWNSAETQLKSVLDQVAPSS-----WSIREGDGAFYGPKIDILSRDNYSREHQIGTIQL 297

Query: 499 DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVT 558
           DF LP RF   Y     +   P+MIHRAVFGSIERF+ ++I++++G  P W++P QA++ 
Sbjct: 298 DFQLPHRFELKYRPHEGDFKPPIMIHRAVFGSIERFMALLIDHYQGKWPFWMNPRQAVII 357

Query: 559 TITSSAVEYAQEIANLLK-------------SHHLSIETDFRNETINYKIREHSIKKIPI 605
            I SS V  A E+ +LL              +H   I+ D R ET+ Y+ R+   K    
Sbjct: 358 PINSSHVGKANEVRDLLSGRSNDYETLDDLVNHQFDIDIDSRAETVGYRTRDALNKSYSY 417

Query: 606 IIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           II+ GDKE     I +R   S      ++ +   +  +
Sbjct: 418 IILVGDKELENNVISLRSRDSRKVTTKTVEEVRELFQE 455


>gi|13508292|ref|NP_110242.1| threonyl-tRNA synthetase [Mycoplasma pneumoniae M129]
 gi|2501059|sp|P75225|SYT_MYCPN RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|1673960|gb|AAB95937.1| threonyl-tRNA synthetase [Mycoplasma pneumoniae M129]
 gi|301633413|gb|ADK86967.1| threonine--tRNA ligase [Mycoplasma pneumoniae FH]
          Length = 564

 Score =  374 bits (960), Expect = e-101,   Method: Composition-based stats.
 Identities = 156/575 (27%), Positives = 281/575 (48%), Gaps = 28/575 (4%)

Query: 80  IMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQ 139
           ++   +++ +P+VQ     + E  FY DF  E+ FS  E  Q+E+ +     + +  ++ 
Sbjct: 7   LLQSWLKANYPQVQFGSYGVQEGEFYLDFKVEKSFSIKEFEQLEQDLNAYFNQLNNVVQT 66

Query: 140 YLSHEKARELFESKKEAYKVEILESIPAKENV--TLYRQGEWFDLCRGPHVRSTGQVKKF 197
            +   K+ + F++  + +   ++ESI +   V  T+  Q  W      P        + F
Sbjct: 67  KIDKTKSLKFFQA--DPFTTTLIESIESNSLVVTTVNEQTFWVHDLVLPL-----PKQGF 119

Query: 198 FKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFH 257
            KL+ V+  Y+ GD  +P L R+ G    ++++L   +   E+  + DHR + + +++F 
Sbjct: 120 VKLLNVSANYFLGDPTKPQLQRLVGIFAASKEQLKSLIAANEQKYQNDHRAIGKRLEIFT 179

Query: 258 IAE-DGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYR 315
                G+G   W  KG  + + +  ++  +++   ++ +++P + +  L++ SGH+  Y 
Sbjct: 180 FDPLVGAGFPIWLEKGAVLKKIIGDFVHYQQLMFGFKTVSSPVLANLELYKISGHYVHYS 239

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            +MF          + +   L+PM CP H  +F H  +SY+ELP R  E   ++R E SG
Sbjct: 240 EDMFP-----SVKLENQMMMLRPMTCPHHCLIFKHKRRSYKELPQRFCEDSILHRFEASG 294

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV----KLSTRP 431
            L GL RVR  T  D H+FC  +Q+  E      LI ++   FGF    +          
Sbjct: 295 GLTGLERVRCMTLLDNHIFCRTDQIKAEIKNAFKLIQTVNNKFGFSFDRIDLALHDPNNK 354

Query: 432 EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDW 491
            K + +D LW ++E+ ++ V   +       +   + +G  AFYGPK ++  K A+ +  
Sbjct: 355 AKFIDNDQLWANSESQIESVFKELN------VPYKIDVGAAAFYGPKIDFQFKTALNKMI 408

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLS 551
              TIQ+DF LP RF   Y +  S    PV+IH  + G+ ERFI  ++E   GNLPLW++
Sbjct: 409 TIATIQLDFLLPERFELRYFDEQSNAQTPVIIHVGIVGTYERFIAALLEKTHGNLPLWMA 468

Query: 552 PIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           P+Q +V  +      + A+++   L   ++ +  D   + +  K+R   + KIP+ II G
Sbjct: 469 PVQVVVIPVNIDKHEKAAKKLYQKLLKENIRVSLDESEDRLGKKVRTAIVNKIPLQIIVG 528

Query: 611 DKEASERS-IGIRRFGSTTTQKVSLLDAIPILTKE 644
           DKE  + + I  R F     QK+   + +  + K+
Sbjct: 529 DKEMQDLTRITCRGFKGEKVQKLYWANFVKKVRKD 563


>gi|328351896|emb|CCA38295.1| threonyl-tRNA synthetase [Pichia pastoris CBS 7435]
          Length = 454

 Score =  374 bits (959), Expect = e-101,   Method: Composition-based stats.
 Identities = 159/453 (35%), Positives = 243/453 (53%), Gaps = 23/453 (5%)

Query: 209 RGDSNRPMLSRIYGTAWNTQQEL-TQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIF 267
                R  L+                Y      S   ++  +A +  L+ I  +  G +F
Sbjct: 1   MIKPPRNCLTSFTRIPKPKYSNFIKCYSNEAPASSATNNMSIALKQQLYMIDSNSPGSVF 60

Query: 268 WHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK---C 323
           +   G ++F  L+ +M+ ++ K  ++E+ TP +  + LW+ SGHWD+Y+ +M+ V+    
Sbjct: 61  FLPHGTRLFNKLVQFMKIQQKKHGFDEVITPLIYKKKLWEISGHWDNYKEDMYRVEGNEV 120

Query: 324 ADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRV 383
           +    KD  TF LKPMNCPGH  ++    +S  ELP+R +++ S++RNE SG+L GL RV
Sbjct: 121 SHGDAKDEETFGLKPMNCPGHCLIYKRFDRSINELPIRYSDWSSLHRNEASGALTGLTRV 180

Query: 384 RGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDD 443
           R F QDD H+FCT+EQ+  E +K  +LI  +Y  FG     + LSTRP+  VG+   W+ 
Sbjct: 181 RRFHQDDGHIFCTQEQISAEIMKTLHLIKLVYGVFGLSDYTLMLSTRPDNYVGTLEEWNS 240

Query: 444 AENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLP 503
           AE  +K VLD +  SS       +  G+GAFYGPK + + +D   R+ Q GTIQ+DF LP
Sbjct: 241 AETQLKSVLDQVAPSS-----WSIREGDGAFYGPKIDILSRDNYSREHQIGTIQLDFQLP 295

Query: 504 SRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSS 563
            RF   Y     +   P+MIHRAVFGSIERF+ ++I++++G  P W++P QA++  I SS
Sbjct: 296 HRFELKYRPHEGDFKPPIMIHRAVFGSIERFMALLIDHYQGKWPFWMNPRQAVIIPINSS 355

Query: 564 AVEYAQEIANLLK-------------SHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
            V  A E+ +LL              +H   I+ D R ET+ Y+ R+   K    II+ G
Sbjct: 356 HVGKANEVRDLLSGRSNDYETLDDLVNHQFDIDIDSRAETVGYRTRDALNKSYSYIILVG 415

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           DKE     I +R   S      ++ +   +  +
Sbjct: 416 DKELENNVISLRSRDSRKVTTKTVEEVRELFQE 448


>gi|313247748|emb|CBY15872.1| unnamed protein product [Oikopleura dioica]
          Length = 538

 Score =  373 bits (958), Expect = e-101,   Method: Composition-based stats.
 Identities = 157/447 (35%), Positives = 255/447 (57%), Gaps = 18/447 (4%)

Query: 46  KVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGF 104
           K  DL+  +  + SIE++   D        HS AHI+ E ++  +    +  GP IEDGF
Sbjct: 106 KFWDLTRKLEGDCSIELLKFSDKEGKETYWHSSAHILGECMERYFGGA-LCYGPDIEDGF 164

Query: 105 YYDFDKEQPF--SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL 162
           YYD         S  ++ ++EK   +++    PF +  ++ ++  ++F+     +K  ++
Sbjct: 165 YYDMWMGNTTISSEADMPKLEKLYYQMMKEKQPFQRLNVTKQQLIDMFK--HNPFKQRLI 222

Query: 163 ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYG 222
                 +  T+Y+ G   D+CRGPH+  TG+ K   KL K +  YW G +++  L R+YG
Sbjct: 223 AEKNIGDT-TVYKCGNLIDMCRGPHLPHTGKAK-ACKLYKTSATYWEGKADQESLQRVYG 280

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISY 282
             +  +++LT+++ F EE++KRDHR++  + +L+      +G  FW  +G  I+  L  +
Sbjct: 281 ITFPDKKQLTEWVNFQEEAKKRDHRRIGTQQELWTFDPVSAGSCFWLPRGAVIYNRLQDF 340

Query: 283 MRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           +R + +   ++E+ TP + +  LW+ SGHW  Y  +MF  K  DD       +A+KPMNC
Sbjct: 341 IRSEYRKRGFKEVVTPNIFNSELWKTSGHWQHYEDDMFTFKVEDDK------WAMKPMNC 394

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
           PGH  +F   L+SY+ELP+R A+FG ++RNE SG+L GL RVR F QDDAH+FC +EQ+ 
Sbjct: 395 PGHCVMFGSRLRSYKELPLRFADFGVLHRNELSGALSGLTRVRRFQQDDAHIFCAREQIE 454

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E     +    +Y  FGF   +  LSTRPEK +G  A WD+AE ++K  L+T  ++++ 
Sbjct: 455 GEITAALDFFKFVYDTFGFTFELN-LSTRPEKYLGEVADWDEAEGMLKNALNTFCSTNET 513

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIG 488
           +    +  G+GAFYGPK +  + DA+ 
Sbjct: 514 K--WELNPGDGAFYGPKIDIKILDALK 538


>gi|114600746|ref|XP_001153909.1| PREDICTED: hypothetical protein isoform 8 [Pan troglodytes]
          Length = 641

 Score =  372 bits (955), Expect = e-100,   Method: Composition-based stats.
 Identities = 145/370 (39%), Positives = 211/370 (57%), Gaps = 15/370 (4%)

Query: 276 FQTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFA 335
            + L  +     K  ++E+ TP + +  LW  SGHW  Y  NMF+ +       +   FA
Sbjct: 272 IKALKIHKSEYRKRGFQEVVTPNIFNSRLWMTSGHWQHYSENMFSFEV------EKELFA 325

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC 395
           LKPMNCPGH  +F+H  +S+RELP+RLA+FG ++RNE SG+L GL RVR F QDDAH+FC
Sbjct: 326 LKPMNCPGHCLMFDHRPRSWRELPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFC 385

Query: 396 TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTI 455
             EQ+ +E     + + ++Y  FGF   +  LSTRPEK +G   +WD AE  ++  L+  
Sbjct: 386 AMEQIEDEIKGCLDFLRTVYSVFGFSFKLN-LSTRPEKFLGDIEVWDQAEKQLENSLNEF 444

Query: 456 KNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS 515
               +      +  G+GAFYGPK +  +KDAIGR  QC TIQ+DF LP RFN  YV+   
Sbjct: 445 GEKWE------LNSGDGAFYGPKIDIQIKDAIGRYHQCATIQLDFQLPIRFNLTYVSHDG 498

Query: 516 -EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANL 574
            +K  PV++HRA+ GS+ER I I+ EN+ G  P WLSP Q +V  +  +  EYAQ++   
Sbjct: 499 DDKKRPVIVHRAILGSVERMIAILTENYGGKWPFWLSPRQVMVVPVGPTCDEYAQKVRQQ 558

Query: 575 LKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
                   + D     T+N KIR   + +   I++ G+KE    ++ IR   +    + +
Sbjct: 559 FHDAKFMADIDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKISGTVNIRTRDNKVHGERT 618

Query: 634 LLDAIPILTK 643
           + + I  L +
Sbjct: 619 ISETIERLQQ 628



 Score =  197 bits (500), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 96/392 (24%), Positives = 148/392 (37%), Gaps = 41/392 (10%)

Query: 2   PSDIKLTFPDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
              IK+T PDG   +      T   +A  IS+ LA   V   +N  V DL  P+  + S+
Sbjct: 80  SKPIKVTLPDGKQVDAESWKTTPYQIACGISQGLADNTVIAKVNNLVWDLDRPLEEDCSL 139

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDE 118
           E++  ED  + AV  HS AHIM EA++ ++    +  GP IE+GFYYD   E+   SS++
Sbjct: 140 ELLKFEDEEAQAVYWHSSAHIMGEAMERVYGGC-LCYGPPIENGFYYDMYLEEGGVSSND 198

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
            + +E   ++II     F +  +  E    +F+     +K  IL         T+YR G 
Sbjct: 199 FSSLEALCKKIIKEKQAFERLEVKKETLLAMFKY--NKFKCRILNEKVNTPTTTVYRCGP 256

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNT-----QQELTQ 233
             DLCRGPHVR TG++K           Y +      +   I+ +         Q     
Sbjct: 257 LIDLCRGPHVRHTGKIKALKIHKS---EYRKRGFQEVVTPNIFNSRLWMTSGHWQHYSEN 313

Query: 234 YLYFLEESEKRD--------HRKL--AREMDLFHIAEDGSGVIFWHRK---GWKIFQTLI 280
              F  E E           H  +   R      +    +     HR    G      L 
Sbjct: 314 MFSFEVEKELFALKPMNCPGHCLMFDHRPRSWRELPLRLADFGVLHRNELSGA--LTGLT 371

Query: 281 SYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
              R +  D +      Q+ D+           Y    F+ K            + +P  
Sbjct: 372 RVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSVFGFSFKL---------NLSTRPEK 422

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE 372
             G + V     ++ ++L   L EFG  +   
Sbjct: 423 FLGDIEV---WDQAEKQLENSLNEFGEKWELN 451


>gi|255730209|ref|XP_002550029.1| threonyl-tRNA synthetase, mitochondrial precursor [Candida
           tropicalis MYA-3404]
 gi|240131986|gb|EER31544.1| threonyl-tRNA synthetase, mitochondrial precursor [Candida
           tropicalis MYA-3404]
          Length = 455

 Score =  372 bits (954), Expect = e-100,   Method: Composition-based stats.
 Identities = 154/453 (33%), Positives = 240/453 (52%), Gaps = 29/453 (6%)

Query: 216 MLSRIYGTAWNTQQELTQYLYFLEESE--KRDHRKLAREMDLFHIAEDGSGVIFWHRKGW 273
           M+ +  G     Q  +       +E E   + +  ++ +  L+       G IF+   G 
Sbjct: 1   MIVQRRGVKLFNQNIIRFLSTKAKEVESSTQSNHAISTKQLLYTTDPVSPGSIFFLPHGT 60

Query: 274 KIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV------KCADD 326
           +I   LI +M+ ++ K  ++E+ TP +    LW++SGHWD+Y+ +MF V      K    
Sbjct: 61  RILNKLIQFMKNQQTKYGFQEVITPLIFKTKLWKKSGHWDNYKDDMFKVVGNDLSKEEHT 120

Query: 327 TIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
              +   + LKPMNCP H  +F    +SY+ELP+R ++F S++RNE SG+L GL RVR F
Sbjct: 121 DNIEEHEYGLKPMNCPSHCMIFAKFDRSYQELPIRYSDFSSLHRNEASGALSGLTRVRRF 180

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP-EKRVGSDALWDDAE 445
            QDD H+FC+  Q+  E      LI   YK FG + I   LSTRP EK +G    W+ AE
Sbjct: 181 HQDDGHIFCSMSQIDQEIKNTLTLIKDTYKVFGIDDIEFYLSTRPEEKYIGDIETWNKAE 240

Query: 446 NIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSR 505
           + +K VL++     Q  I      G+GAFYGPK + +LKDA G+  Q GTIQ+DF LP+R
Sbjct: 241 DQLKNVLNSTAGEGQWSI----REGDGAFYGPKIDVLLKDAFGKKHQVGTIQLDFQLPNR 296

Query: 506 FNAFYVNSHSEK-CHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA 564
           F   YV     +   P+++HRAV+GS+ERF  I++++++G  P W++P QAI+  I  S 
Sbjct: 297 FELKYVGEDGNRDHQPILVHRAVYGSLERFFAILLDHYQGKWPFWINPRQAIIIPINESH 356

Query: 565 VEYAQEIANL--------------LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           V+ A+ +                 L S++  ++ D R ETI  + +E   K    II+ G
Sbjct: 357 VQAAESLQQKLGGDLLNSDESIAPLTSYNFYVDIDKRGETIGARTKEAIQKGYSYIILIG 416

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           DKE +  +  +R       + ++  +   +  +
Sbjct: 417 DKEITNGTFAVRTRDDRKVKNMTSEEIYDLFVQ 449


>gi|58700004|ref|ZP_00374566.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|58533480|gb|EAL57917.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
          Length = 342

 Score =  371 bits (953), Expect = e-100,   Method: Composition-based stats.
 Identities = 178/353 (50%), Positives = 245/353 (69%), Gaps = 12/353 (3%)

Query: 253 MDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHW 311
           MDLFHI E+  G +FWH +G+ ++  L SY+R+K+  + Y E+ TP ++ + LW++SGHW
Sbjct: 1   MDLFHIQEEAVGQVFWHEQGYILYNVLESYIRKKLINNGYFEVKTPILVSKELWEKSGHW 60

Query: 312 DSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRN 371
           D +R NMF V        + +  A+KPMNCP HV +FN   +SYR+LP+R+AEFG+ +RN
Sbjct: 61  DKFRENMFIV-----DESESKKLAIKPMNCPCHVQIFNSHTRSYRDLPIRMAEFGTCHRN 115

Query: 372 EPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP 431
           E SGSLHGLMRVRGFTQDDAH+FC +EQ+ +E +K  +L+  +Y + GF +I VK S RP
Sbjct: 116 ESSGSLHGLMRVRGFTQDDAHIFCMEEQVNSETIKFCDLLKEVYSELGFNEISVKFSDRP 175

Query: 432 EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDW 491
           + R G D +WD AE  +   +          ++  +  GEGAFYGPK E++LKDAIGR W
Sbjct: 176 DVRAGDDEVWDRAEKALLEAVKEAG------LSYELSPGEGAFYGPKLEFVLKDAIGRSW 229

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLS 551
           QCGT+QVDF LP R  AFY+ +   K HPVM+HRA+ G+ ERFIGI+IEN+ G  P+WL+
Sbjct: 230 QCGTLQVDFILPERLGAFYIGADGHKHHPVMLHRAILGTFERFIGILIENYAGKFPVWLA 289

Query: 552 PIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
           P Q  + TIT+ A  YA +I+N+LK   + ++TD  NE I+YKIR HS+ K+P
Sbjct: 290 PTQLAILTITNEADGYATKISNVLKEQGVRVKTDLTNEKISYKIRLHSLNKVP 342


>gi|310823910|ref|YP_003956268.1| threonyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|309396982|gb|ADO74441.1| Threonyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
          Length = 397

 Score =  371 bits (952), Expect = e-100,   Method: Composition-based stats.
 Identities = 170/392 (43%), Positives = 245/392 (62%), Gaps = 13/392 (3%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQ 298
              + DHR L   +DLFH+ E+  G++FWH +G+ ++Q L   +RR++    Y E+ TPQ
Sbjct: 1   MLSEHDHRALGDRLDLFHLQEEAPGMVFWHPRGFVLYQLLEERVRRELASGGYREVRTPQ 60

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           VL Q +W+ SGHW ++R  MF +   +      R FA+KP++CPGH+ +F     S+R L
Sbjct: 61  VLGQRIWESSGHWQNFRHGMFVLDDGE------RPFAMKPVSCPGHIQLFQRLAPSFRSL 114

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R+AEFG V+RNE SG+LHGL R+R FTQDD H+FC +EQ+ +E       + + Y+ F
Sbjct: 115 PLRMAEFGLVHRNESSGALHGLFRLRQFTQDDGHIFCMEEQVADEVAAFCRSLRAFYRGF 174

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           GFE   V  S+RP +R G DALWD      +     ++ + +  ++  +  GEGAFYGPK
Sbjct: 175 GFEDAQVAFSSRPAQRAGDDALWD------RAEAALLEAAGRVGLDCRMQPGEGAFYGPK 228

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ILKD  GRDWQCGTIQ+DF LP RF+  YV+S  EK  P M+HRA+FGS+ERF+GI+
Sbjct: 229 LEFILKDRSGRDWQCGTIQLDFVLPERFDLHYVDSGGEKRRPAMLHRAIFGSVERFLGIL 288

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           +E+ +G LP WL+P Q  V  + + +  YA E+   L +  L +E D R ET++ +I E 
Sbjct: 289 LEHHQGVLPAWLAPEQVRVLPVGADSHAYAAEVQEHLLAAGLRVEADARGETLSRRILEA 348

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
               +P  ++ G +E + RSI IR  G     
Sbjct: 349 HQDAVPFAVLVGPREQAGRSIQIRERGGAQRN 380


>gi|115359784|ref|YP_776922.1| tRNA synthetase, class II (G, H, P and S) [Burkholderia ambifaria
           AMMD]
 gi|115285072|gb|ABI90588.1| tRNA synthetase, class II (G, H, P and S) [Burkholderia ambifaria
           AMMD]
          Length = 402

 Score =  370 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 169/413 (40%), Positives = 241/413 (58%), Gaps = 14/413 (3%)

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQV 299
            +  DHR L  ++DLFH  ++  G IFWH +G  +++ +  Y+R R  +  + E+ TPQ+
Sbjct: 1   MDDFDHRVLGNKLDLFHQQDESPGAIFWHPRGMVLYRVVEEYIRVRMRQAAFAEVRTPQI 60

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           + + LW+QSGHW+ +  NMF+++       D   + LKPM+CP HV +F  G +SYR+LP
Sbjct: 61  VSRDLWEQSGHWEKFGRNMFSLE------SDNNPYCLKPMSCPCHVQIFKKGSRSYRDLP 114

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R +EFG+V+R EPSG+LHGLMR R FTQDDAHV C  +Q+  E  +   L+ +IY DFG
Sbjct: 115 IRYSEFGAVHRAEPSGALHGLMRARAFTQDDAHVLCMPDQVEIEVARFCVLLKTIYADFG 174

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           F +  V LSTRP  R G DA+WD +E +          +    ++  +  GEGAFYGPK 
Sbjct: 175 FGEFDVALSTRPAVRAGDDAVWDRSEAM------LASAARAAGLDFAIQAGEGAFYGPKL 228

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           E+ L D  GR WQCGTIQ+DF LP R  A YV     K  PVM+H AV GS+ERFIGI++
Sbjct: 229 EFHLFDRQGRKWQCGTIQLDFVLPERLGAAYVAEDGAKATPVMLHHAVLGSLERFIGILL 288

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E+++G LP WL+P Q +V  I      +A   A   +     +  DFR E +  KI +  
Sbjct: 289 EHYEGWLPTWLAPDQIVVANIGKDDRAFADNTAFAFEDIGCRVLRDFRAERLPRKIFDAR 348

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
               PI+ I G KEA    + +R         +++ DA+  L + +  P   +
Sbjct: 349 ELAAPIVAIAGRKEALAGEVSLRLRDG-EQHVLTINDALAYLKQHACVPSATR 400


>gi|260942551|ref|XP_002615574.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
 gi|238850864|gb|EEQ40328.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
          Length = 453

 Score =  370 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 151/429 (35%), Positives = 240/429 (55%), Gaps = 29/429 (6%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTP 297
           +ES  + +  ++ +  L+       G IF+   G +IF  L+ +M+ +++K  ++E+ TP
Sbjct: 22  KESSTQANHAISNKQLLYITDPVTPGSIFFLPHGTRIFNKLVHFMKNQQLKYGFQEVITP 81

Query: 298 QVLDQHLWQQSGHWDSYRANMFAV------KCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
            +    LW+ SGHWD+Y+ +MF V      K  D     L  + LKPMNCPGH  +F+  
Sbjct: 82  LIYKTKLWEVSGHWDNYKDDMFKVIGNDLTKEKDSEEAHLHEYGLKPMNCPGHCLIFSKF 141

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI 411
            +SY ELP+RL++F S++RNE SG+L GL RVR F QDD H+FC  +Q+  E     NLI
Sbjct: 142 ERSYNELPIRLSDFSSLHRNEASGALSGLTRVRRFHQDDGHIFCEMDQIHQEITNTINLI 201

Query: 412 ISIYKDFGFE---KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
              Y  FG +    +   LSTRPEK +G    WD+AE+ +  VLDT    ++  I     
Sbjct: 202 KDTYNVFGIDSTKDVDFFLSTRPEKFIGDAQTWDEAESQLASVLDTTAGKNKWSI----R 257

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK-CHPVMIHRAV 527
            G+GAFYGPK + +L DA  +  Q GTIQ+DF LP+RF   Y++ + ++   P+MIHRAV
Sbjct: 258 EGDGAFYGPKIDILLTDAFNKKHQVGTIQLDFQLPARFELKYISRNGDRDNQPIMIHRAV 317

Query: 528 FGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLL------------ 575
           FGS+ERF  I++++++G  P W++P QAI+  ++    E A+++   L            
Sbjct: 318 FGSLERFFAILLDHYQGKWPFWINPRQAIIIPVSDKHHEAAEKLQKQLVGDIVNSESSIA 377

Query: 576 --KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
               ++  ++ D R+ET+  +I++   K    I++ GDK+    ++ IR   S   +  +
Sbjct: 378 PMTGYNFFVDVDRRSETVGNRIKDAVKKGYSYILMVGDKDIENGTVAIRSRDSRKVENKT 437

Query: 634 LLDAIPILT 642
           + +      
Sbjct: 438 VEEIYEKFV 446


>gi|71019463|ref|XP_759962.1| hypothetical protein UM03815.1 [Ustilago maydis 521]
 gi|46099508|gb|EAK84741.1| hypothetical protein UM03815.1 [Ustilago maydis 521]
          Length = 536

 Score =  368 bits (944), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 154/472 (32%), Positives = 230/472 (48%), Gaps = 59/472 (12%)

Query: 209 RGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFW 268
           +   +R   S  Y ++   +  L         S   DHR + +   LF   E   G  F 
Sbjct: 29  QRPQSRSWTSWRYSSSSAAKSPLASSSDSAASSSSNDHRSIGKAQTLFLTHESSPGTPFI 88

Query: 269 HRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADD- 326
              G ++ + +   +R       Y+E+ +PQ+    LW++SGHWD+YR +MFA +   + 
Sbjct: 89  LPHGMRLARKVERVVRDLYDVYGYDEVQSPQLYKTSLWKRSGHWDNYRDDMFAAEGYKER 148

Query: 327 --------------------------TIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
                                        +  +F LKPMNCPGH  +F    +SYR+LP+
Sbjct: 149 FSSSIDDRRTSCCSIHPPTSATEATAANAEDESFGLKPMNCPGHCLIFGSSERSYRDLPI 208

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R AEF  ++RNE SG+L GL RVR F QDDAHVFC  +Q+  E   + +++ S Y  FGF
Sbjct: 209 RYAEFSPLHRNEASGALTGLTRVRRFHQDDAHVFCRPDQVAVEINSMLSMLTSAYDTFGF 268

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
               + LSTRPE  +GS   WD AE  ++  LD      +      +  G+GAFYGPK +
Sbjct: 269 SDFELVLSTRPESFIGSVEEWDRAEAGLRQALDASGRKWE------MNAGDGAFYGPKID 322

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH----SEKCHPVMIHRAVFGSIERFIG 536
             L D  GR  Q  TIQ+DF LP RF+  Y +      +E+  PVMIHRA+ GS+ERF+ 
Sbjct: 323 IHLVDGQGRRHQTATIQLDFQLPRRFDLSYADPAAKQTNERSVPVMIHRAILGSVERFMA 382

Query: 537 IMIENFKGNLPLWLSPIQAIVTTIT---SSAVEYAQEIANL------------------L 575
           I+IE   G  P WLSP QAI+   T    +  EY +++                     L
Sbjct: 383 ILIEQTAGWWPFWLSPRQAIIIPATTNNPALTEYVEKLHKFLSLGIHPDAPPSSSSERHL 442

Query: 576 KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGST 627
           +   + +E++ +NE +   +R+  + +   I++ G+KE    +I +R+    
Sbjct: 443 QRFFVDVESNPQNEKLGKLVRKAQLARYNYILVVGEKEMHTNTINVRKRDDK 494


>gi|12045236|ref|NP_073047.1| threonyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|1351178|sp|P47615|SYT_MYCGE RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|3844963|gb|AAC71602.1| threonyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|166078630|gb|ABY79248.1| threonyl-tRNA synthetase [synthetic Mycoplasma genitalium JCVI-1.0]
          Length = 564

 Score =  368 bits (944), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 160/573 (27%), Positives = 285/573 (49%), Gaps = 24/573 (4%)

Query: 80  IMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQ 139
           ++   ++  +  VQ        D FY DF   + FS+ + A+IE  +  + ++     ++
Sbjct: 7   LLQIWLKCKYANVQFGEHGFNGDEFYLDFYINENFSTKQFAKIESDLNSLSSKLEGISQK 66

Query: 140 YLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFK 199
           ++S ++A   FE   +  K  + +S   K  +T +    ++       +  T   K F K
Sbjct: 67  FVSLDEALSFFE-NDQFTKNLLKKSNLNKFKITFFENKHFWIE----DLTLTFIKKSFIK 121

Query: 200 LMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIA 259
           L+ V+  Y+ GD ++  L RI G    +++EL Q +   EE  K+DHR L ++++LF   
Sbjct: 122 LLNVSVNYFLGDPSQLQLQRINGIFAQSKKELEQLIKENEERLKKDHRSLGKQLELFSFD 181

Query: 260 E-DGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRAN 317
              G+G+  W  KG  +   + +++  +++   +  + +P + +  L++ SGH+  Y+ +
Sbjct: 182 PLIGAGLPIWLAKGTTLRNIIGNFVHHQQLLFGFNTVCSPVLANIELFKISGHYQHYKED 241

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           MF          D +   L+PM CP H  +F     SY+++P R +E   ++R E SG L
Sbjct: 242 MFPAIKL-----DSQAMMLRPMTCPHHCLIFKQKRYSYKKMPQRFSEDSILHRFEASGGL 296

Query: 378 HGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK---- 433
            GL RVR  T  D H+FC  +Q+ +E     NLI  + K FGF    + LS    K    
Sbjct: 297 IGLERVRCMTLLDNHIFCRADQIKSEIKNAFNLIQKVNKKFGFIFDRIDLSLHDPKNQSK 356

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
            + +  LW ++E+ M+ VL  +    Q  I      G  AFYGPK ++  K    +    
Sbjct: 357 FIDNPGLWRESESQMENVLKDLNIQYQKEI------GAAAFYGPKIDFQFKTIFKKMITI 410

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI 553
            TIQ+DF LP +F+  Y++  +    PV+IH  + G+ ERFI  ++E   GN PLWL+P+
Sbjct: 411 ATIQLDFLLPEKFDLTYIDKKNTLKKPVIIHVGIIGTYERFIAALLEKTSGNFPLWLAPV 470

Query: 554 QAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
           QA++  +     ++ A+++ N L   ++ +  D   + +  K+R+  I+KIP+ +I GDK
Sbjct: 471 QAVIIPVNIQKHLKAAKKLYNKLLKENIRVNLDDNQDRLAKKVRQAIIEKIPLQLIVGDK 530

Query: 613 EASE-RSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           E      +  R F      ++S  + +  + ++
Sbjct: 531 EIENLEKLTCRGFKGEKITRISFNNFVKRVRRD 563


>gi|50306435|ref|XP_453191.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49642325|emb|CAH00287.1| KLLA0D02772p [Kluyveromyces lactis]
          Length = 461

 Score =  367 bits (942), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 152/429 (35%), Positives = 228/429 (53%), Gaps = 34/429 (7%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYM--RRKIKDDYEEINTP 297
           +S      +++ + +L+       G IF+   G KIF  L+S+M  +++ K  ++E+ TP
Sbjct: 36  DSAATTAHEVSTKQELYITDPISPGSIFFLPNGTKIFNKLVSFMKLQQQNKYGFQEVVTP 95

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +  + LW+QSGHW++Y+ +MF V+  D +      + LKPMNCPGH  VF    +SY E
Sbjct: 96  LIYRKTLWEQSGHWENYKDDMFRVEGNDVS---KEEYGLKPMNCPGHCVVFKRFDRSYNE 152

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R ++F  ++RNE SG+L GL RVR F QDD H+FCT +Q+  E  K   L+   Y  
Sbjct: 153 LPLRFSDFSPLHRNEASGALSGLTRVRKFHQDDGHIFCTPDQVRQEIQKCLELVDMCYTK 212

Query: 418 FGFEKIMVKL-------STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
                   K        STRPEK VG   +WD AE+++K  L +               G
Sbjct: 213 VFPISGDSKQAAYSLTLSTRPEKYVGDIEVWDHAEDVLKDTLQSWGQPW------TTNEG 266

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           +GAFYGPK + ++ D  G+  Q  TIQ+DF LP RF+  + +  +    P+MIHRAVFGS
Sbjct: 267 DGAFYGPKIDILVNDHTGKSHQVATIQLDFQLPERFDLQFKDKDNSYKRPIMIHRAVFGS 326

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIANLLK----------- 576
           +ERF+ I+I++ KG  P WL+P Q +V  +       +E A +  N L+           
Sbjct: 327 VERFMAILIDSSKGKWPFWLNPNQCMVIPVKTEDEKIMELAFKTVNSLRGENSDPKSPIP 386

Query: 577 --SHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
             S H S++ D R+E+++ +IRE   K    II+ GDKE     + IR   S     +++
Sbjct: 387 LNSFHFSVDMDARDESVSKRIREAIKKHYSYIIMIGDKEVEAGKVAIRTRESKKVDLLTI 446

Query: 635 LDAIPILTK 643
            D       
Sbjct: 447 DDVFERFVD 455


>gi|255514109|gb|EET90372.1| threonyl-tRNA synthetase [Candidatus Micrarchaeum acidiphilum
           ARMAN-2]
          Length = 560

 Score =  367 bits (941), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 155/403 (38%), Positives = 231/403 (57%), Gaps = 14/403 (3%)

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLD 301
           +RDHR +   +DL+   E    +++WH  G  I+Q LI +MR  +   DY+EI+TP + +
Sbjct: 163 ERDHRSIGESLDLYSFQEVSPSMVYWHPNGRIIYQQLIEFMRGMERLYDYKEISTPALAN 222

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             LW  SGH D Y+ NMF +            F LKPMNCP  + ++     SY+ELP R
Sbjct: 223 IALWHVSGHIDYYKDNMFIIDDGSS------EFGLKPMNCPSTILIYKSRRWSYKELPFR 276

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
            A F  +YR E SG+L GL RV+  TQDD H+F + E +  E   +  L+  +Y  FG +
Sbjct: 277 TAIFDKLYRREVSGALSGLFRVQELTQDDGHIFVSAEGVEKEITLLLELVKRVYGVFGLK 336

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
               KLST P++ +G + LWD A   +K  L+T      + +   +   EGAFYGPK ++
Sbjct: 337 Y-YAKLSTMPDEHLGDEELWDKATESIKRALET------NGMKYEIKEKEGAFYGPKIDF 389

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            ++D+ GR WQC TIQ+D+ LP RF   Y     ++  PV+IHRA+ GSIERF+GI++E+
Sbjct: 390 DIEDSQGRLWQCATIQLDYQLPKRFGIVYTGEDGKEHTPVIIHRAILGSIERFVGILVEH 449

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           ++G LPLWLSP+QA V +I+     YA+ +   +K   +  E D  + T+ YKIR   ++
Sbjct: 450 YQGKLPLWLSPVQARVISISEENNSYAESVFEKIKLEGIRAEMDGSDHTLEYKIRSAQMQ 509

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           KIP I++ G++E  + SI +R         + L   +  + KE
Sbjct: 510 KIPYIVVIGNREREKGSISVRMRSGKQENGIKLEPLLESIKKE 552


>gi|27262218|gb|AAN87390.1| Threonyl-tRNA synthetase [Heliobacillus mobilis]
          Length = 311

 Score =  366 bits (939), Expect = 8e-99,   Method: Composition-based stats.
 Identities = 141/306 (46%), Positives = 198/306 (64%), Gaps = 7/306 (2%)

Query: 339 MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE 398
           MNCPG + V+ + + SYR+LP+R+AE G V+R+E SG+LHGLMRVR FTQDDAH+F    
Sbjct: 1   MNCPGSMLVYKNSIHSYRDLPLRMAELGLVHRHEISGALHGLMRVRCFTQDDAHIFMLPS 60

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNS 458
           Q+  E + + +L+   YK FGF+  + +LST+PEK +GSD +W+ A + ++  L +    
Sbjct: 61  QIKEEIMGVIDLVDRFYKTFGFDYHI-ELSTKPEKAMGSDEIWELATSSLEDALKS---- 115

Query: 459 SQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC 518
               ++  +  G+GAFYGPK ++ LKD +GR WQCGTIQ+DF +P RF+  YV    +K 
Sbjct: 116 --KGMDYKINPGDGAFYGPKIDFHLKDCLGRTWQCGTIQLDFQMPERFDLTYVGEDGQKH 173

Query: 519 HPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSH 578
            PVMIHR VFGSIERFIGI+ E+F G  P WL+P+Q  V  IT     YAQ++   L   
Sbjct: 174 RPVMIHRVVFGSIERFIGILTEHFAGAFPAWLAPVQVRVLPITDRHHAYAQKVLAHLAER 233

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
            +  E D RNE I YKIRE  +KKIP +++ GDKEA   ++ +R++G        L +  
Sbjct: 234 GIRAEVDDRNEKIGYKIREGQVKKIPYLLVVGDKEAENGAVAVRKYGEGDKGACGLDEFT 293

Query: 639 PILTKE 644
            +L +E
Sbjct: 294 KMLIEE 299


>gi|45190711|ref|NP_984965.1| AER105Wp [Ashbya gossypii ATCC 10895]
 gi|44983690|gb|AAS52789.1| AER105Wp [Ashbya gossypii ATCC 10895]
          Length = 457

 Score =  365 bits (937), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 149/433 (34%), Positives = 234/433 (54%), Gaps = 41/433 (9%)

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEINTPQVLDQH 303
            R+++   DL+       G  F+   G K+F  LI +M+ + ++   ++E+ TP +  + 
Sbjct: 37  AREVSSRQDLYLTDPISPGSTFFLPNGTKVFNKLIQFMKLQQQNKFGFQEVITPLIYRKS 96

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+QSGHW++Y+ +MF V+  D        + LKPMNCPGH  +F    +SY ELP+R +
Sbjct: 97  LWEQSGHWENYKDDMFRVEGNDCA---KEEYGLKPMNCPGHCVMFKRFDRSYTELPLRFS 153

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK---DFGF 420
           +F  ++RNE SG+L GL RVR F QDD H+FCT EQ+  E  K   L+   Y      G 
Sbjct: 154 DFSPLHRNEASGALSGLTRVRKFHQDDGHIFCTPEQVEGEIEKCLQLVDLCYGSVLPLGE 213

Query: 421 EK-----IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                    + LSTRPEK VG   +W+ AE+++K +LD             +  G+GAFY
Sbjct: 214 TSDRAELYTMCLSTRPEKYVGELDVWNHAESVLKSILDNSGKQW------SINEGDGAFY 267

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +KD  G+  Q  TIQ+DF LP RF+  Y ++ +    P+MIHRAVFGS+ERF+
Sbjct: 268 GPKVDIKVKDHTGKYHQVATIQLDFQLPERFDMRYKDADNTYKRPIMIHRAVFGSVERFM 327

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIAN----------------LLKSHH 579
            +++++ KGN P WL+P Q +V  +++S  E  Q                     L S H
Sbjct: 328 ALLLDSNKGNWPFWLNPHQCMVLPVSASNGEMVQAAKALVDKLCGRDTSSTKPVELNSFH 387

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
            + E D R+E++ Y++R+   +K   I++ G +E ++  + +R   S+  Q +S  +   
Sbjct: 388 FNAEIDLRDESVGYRLRDAISRKYSYIVLIGARELAQNKVAVRSRDSSKIQMMSTEELYD 447

Query: 640 ILTKESLPPDCQK 652
           +        D ++
Sbjct: 448 MFC------DLER 454


>gi|241948445|ref|XP_002416945.1| threonyl-trna synthetase, mitochondrial precursor, putative
           [Candida dubliniensis CD36]
 gi|223640283|emb|CAX44533.1| threonyl-trna synthetase, mitochondrial precursor, putative
           [Candida dubliniensis CD36]
          Length = 455

 Score =  364 bits (935), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 144/422 (34%), Positives = 227/422 (53%), Gaps = 27/422 (6%)

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLD 301
            + +  ++ +  L+       G IF+   G +I   LI +M+ ++ K  ++E+ TP +  
Sbjct: 30  TQSNHVISSKQLLYTTDPTSPGSIFFLPHGTRILNKLIQFMKNQQTKYGFQEVVTPLIFK 89

Query: 302 QHLWQQSGHWDSYRANMFAV------KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
             LW++SGHWD+Y+ +MF V      K       +   + LKPMNCP H  +F    +SY
Sbjct: 90  TKLWKKSGHWDNYKDDMFKVVGNDITKEEHTDNIEEHEYGLKPMNCPSHCMIFAKFDRSY 149

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           +ELPVR ++F S++RNE SG+L GL RVR F QDD H+FC+ +Q+  E     +LI   Y
Sbjct: 150 QELPVRYSDFSSLHRNEASGALSGLTRVRRFHQDDGHIFCSMDQIDGEIKNTLDLIKDTY 209

Query: 416 KDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
             FG  +I   LSTRPE   +G+   WD AE  +K VL+          N  +  G+GAF
Sbjct: 210 NVFGINEIEFYLSTRPEDKFIGNIDTWDIAELQLKNVLNATAGEG----NWSIREGDGAF 265

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK-CHPVMIHRAVFGSIER 533
           YGPK + +LKDA  +  Q GTIQ+DF LP+RF   YV    ++   P+++HRAVFGS+ER
Sbjct: 266 YGPKIDVLLKDAFNKKHQVGTIQLDFQLPNRFELKYVGEDGKRDHQPILVHRAVFGSLER 325

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLK--------------SHH 579
           F  I++++++G  P W++P QA++  I  S V  A+E+   L                 +
Sbjct: 326 FFAILLDHYQGKWPFWINPRQALIVPINESHVPVAEELQKKLSGDIISCDKSIAPLTGFN 385

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
             ++ D R ET+  + ++   K    +I+ GDK+ +  +  +R       + ++  D   
Sbjct: 386 FHVDVDKRGETVGARTKDAIQKGYSYLIMIGDKDIANGTFAVRSRDDRKIRNMTSDDIYK 445

Query: 640 IL 641
           + 
Sbjct: 446 MF 447


>gi|68468847|ref|XP_721482.1| hypothetical protein CaO19.2984 [Candida albicans SC5314]
 gi|68469391|ref|XP_721210.1| hypothetical protein CaO19.10501 [Candida albicans SC5314]
 gi|46443119|gb|EAL02403.1| hypothetical protein CaO19.10501 [Candida albicans SC5314]
 gi|46443402|gb|EAL02684.1| hypothetical protein CaO19.2984 [Candida albicans SC5314]
          Length = 455

 Score =  364 bits (935), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 144/422 (34%), Positives = 229/422 (54%), Gaps = 27/422 (6%)

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLD 301
            + +  ++ +  L+       G IF+   G +I   LI +M+ ++ K  ++E+ TP +  
Sbjct: 30  TQSNHVISSKQLLYTTDPTSPGSIFFLPHGTRILNKLIQFMKNQQTKYGFQEVVTPLIFK 89

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKD------LRTFALKPMNCPGHVAVFNHGLKSY 355
             LW++SGHWD+Y+ +MF V   D T ++         + LKPMNCP H  +F    +SY
Sbjct: 90  TKLWKKSGHWDNYKDDMFKVVGNDITKEEYTDNIEEHEYGLKPMNCPSHCMIFAKFDRSY 149

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           +ELPVR ++F S++RNE SG+L GL RVR F QDD H+FC+ +Q+  E      LI   Y
Sbjct: 150 QELPVRYSDFSSLHRNEASGALSGLTRVRRFHQDDGHIFCSMDQIDGEIKNTLELIKDTY 209

Query: 416 KDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
             FG  +I   LSTRPE   +G    WD AE+ +K VL++         N     G+GAF
Sbjct: 210 NVFGINEIEFYLSTRPEDKFIGEIETWDIAESQLKNVLNSTAGEG----NWATREGDGAF 265

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK-CHPVMIHRAVFGSIER 533
           YGPK + +LKDA  +  Q GTIQ+DF LP+RF   YV    ++   P+++HRAVFGS+ER
Sbjct: 266 YGPKIDVLLKDAFNKKHQVGTIQLDFQLPNRFELKYVGEDGKRDHQPILVHRAVFGSLER 325

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSH--------------H 579
           F  I++++++G  P W++P QA++  I  S V  A+E+   L  +              +
Sbjct: 326 FFAILLDHYQGKWPFWINPRQALIVPINESHVPVAEELQKKLSGNIVSCDNAIAPLTGFN 385

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
             ++ D R ET+  + ++   K    +I+ GDK+ +  +  +R       + ++  +   
Sbjct: 386 FHVDIDKRGETVGARTKDAIQKGYSYLIMIGDKDIANGTFAVRSRDDRKIKNMTSDEIYK 445

Query: 640 IL 641
           + 
Sbjct: 446 MF 447


>gi|62078771|ref|NP_001014042.1| probable threonyl-tRNA synthetase 2, cytoplasmic [Rattus
           norvegicus]
 gi|54035500|gb|AAH83878.1| Threonyl-tRNA synthetase-like 2 [Rattus norvegicus]
          Length = 553

 Score =  363 bits (931), Expect = 6e-98,   Method: Composition-based stats.
 Identities = 148/404 (36%), Positives = 226/404 (55%), Gaps = 14/404 (3%)

Query: 5   IKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           I +    G +++      T   VA  IS+ LA+  V   +NG + DL  P+  + ++E++
Sbjct: 150 ISVRVAGGKTVQGEEWKTTPYQVAAGISKELAENTVIAKVNGVLWDLDRPLEGDSTVELL 209

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
             ++  + AV  HS AH++ EA++  +    +  GP IE+GFYYD    ++  SS EL+ 
Sbjct: 210 MFDNEEAQAVYWHSSAHVLGEAMELYYGGH-LCYGPPIENGFYYDMFIGDRVVSSTELSA 268

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +E   + II    PF +  +S +   E+F+     +K  IL+        T+YR G   D
Sbjct: 269 LENICKTIIKEKQPFERLEVSKDSLLEMFKY--NKFKCRILKEKVDTPTTTVYRCGPLID 326

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LC+GPHVR TG++K   K+ K +  YW G+     L R+YG ++   + +  +  F EE+
Sbjct: 327 LCKGPHVRHTGKIK-AIKIFKNSSTYWEGNPEMETLQRVYGISFPDSKMMRDWEKFQEEA 385

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVL 300
             RDHRK+ +E +LF   +   G  F+  +G  I+ TL+ ++R +    ++ E+ +P + 
Sbjct: 386 RSRDHRKIGKEQELFFFHDLSPGSCFFLPRGAFIYNTLMDFIREEYHKRNFTEVLSPNMY 445

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  LW+ SGHW  Y  NMF      DT      FALKPMNCPGH  +F H  +S+RE+PV
Sbjct: 446 NSKLWETSGHWQHYSNNMFTFDIEKDT------FALKPMNCPGHCLMFAHRPRSWREMPV 499

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           R A+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+   C
Sbjct: 500 RFADFGVLHRNELSGTLTGLTRVRRFQQDDAHIFCMVEQLKLPC 543


>gi|238879230|gb|EEQ42868.1| threonyl-tRNA synthetase, mitochondrial precursor [Candida albicans
           WO-1]
          Length = 455

 Score =  362 bits (930), Expect = 8e-98,   Method: Composition-based stats.
 Identities = 144/422 (34%), Positives = 228/422 (54%), Gaps = 27/422 (6%)

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLD 301
            + +  ++ +  L+       G IF+   G +I   LI +M+ ++ K  ++E+ TP +  
Sbjct: 30  TQSNHVISSKQLLYTTDPTSPGSIFFLPHGTRILNKLIQFMKNQQTKYGFQEVVTPLIFK 89

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKD------LRTFALKPMNCPGHVAVFNHGLKSY 355
             LW++SGHWD+Y+ +MF V   D T ++         + LKPMNCP H  +F    +SY
Sbjct: 90  TKLWKKSGHWDNYKDDMFKVVGNDITKEEYTDNIEEHEYGLKPMNCPSHCMIFAKFDRSY 149

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           +ELPVR ++F S++RNE SG+L GL RVR F QDD H+FC+ +Q+  E      LI   Y
Sbjct: 150 QELPVRYSDFSSLHRNEASGALSGLTRVRRFHQDDGHIFCSMDQIDGEIKNTLELIKDTY 209

Query: 416 KDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
             FG  +I   LSTRPE   +G    WD AE+ +K VL++         N     G+GAF
Sbjct: 210 NVFGINEIEFYLSTRPEDKFIGEIETWDIAESQLKNVLNSTAGEG----NWATREGDGAF 265

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK-CHPVMIHRAVFGSIER 533
           YGPK + +LKDA  +  Q GTIQ+DF LP+RF   YV    ++   P+++HRAVFGS+ER
Sbjct: 266 YGPKIDVLLKDAFNKKHQVGTIQLDFQLPNRFELKYVGEDGKRDHQPILVHRAVFGSLER 325

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLK--------------SHH 579
           F  I++++++G  P W++P QA++  I  S V  A+E+   L                 +
Sbjct: 326 FFAILLDHYQGKWPFWINPRQALIVPINESHVPVAEELQKKLSGDIVSCDNAIAPLTGFN 385

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
             ++ D R ET+  + ++   K    +I+ GDK+ +  +  +R       + ++  +   
Sbjct: 386 FHVDIDKRGETVGARTKDAIQKGYSYLIMIGDKDIANGTFAVRSRDDRKIKNMTSDEIYK 445

Query: 640 IL 641
           + 
Sbjct: 446 MF 447


>gi|3859700|emb|CAA21975.1| mitochondrial threonyl tRNA synthetase [Candida albicans]
          Length = 455

 Score =  361 bits (927), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 144/422 (34%), Positives = 227/422 (53%), Gaps = 27/422 (6%)

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLD 301
            + +  ++ +  L+       G IF+   G +I   LI +M+ ++ K  ++E+ TP +  
Sbjct: 30  TQSNHVISSKQLLYTTDPTSPGSIFFLPHGTRILNKLIQFMKNQQTKYGFQEVVTPLIFK 89

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKD------LRTFALKPMNCPGHVAVFNHGLKSY 355
             LW++SGHWD+Y+ +MF V   D T ++         + LKPMNCP H  +F    +SY
Sbjct: 90  TKLWKKSGHWDNYKDDMFKVVGNDITKEEYTDNIEEHEYGLKPMNCPSHCMIFAKFDRSY 149

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           +ELPVR ++F S++RNE SG+L GL RVR F QDD H+FC+ +Q+  E      LI   Y
Sbjct: 150 QELPVRYSDFSSLHRNEASGALSGLTRVRRFHQDDGHIFCSMDQIDGEIKNTLELIKDTY 209

Query: 416 KDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
             FG  +I   LSTRPE   +G    WD AE+ +K VL++         N     G+GAF
Sbjct: 210 NVFGINEIEFYLSTRPEDKFIGEIETWDIAESQLKNVLNSTAGEG----NWATREGDGAF 265

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK-CHPVMIHRAVFGSIER 533
           YGPK + +LKDA  +  Q GTIQ+DF LP+RF   YV    ++   P+++HRAVFGS+ER
Sbjct: 266 YGPKIDVLLKDAFNKKHQVGTIQLDFQLPNRFELKYVGEDGKRDHQPILVHRAVFGSLER 325

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLK--------------SHH 579
           F  I++++++G  P W++P QA++  I  S V  A+E+   L                  
Sbjct: 326 FFAILLDHYQGKWPFWINPRQALIVPINESHVPVAEELQKKLSGDIVSCDNAIAPLTGFT 385

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
             ++ D R ET+  + ++   K    +I+ GDK+ +  +  +R       + ++  +   
Sbjct: 386 FHVDIDKRGETVGARTKDAIQKGYSYLIMIGDKDIANGTFAVRSRDDRKIKNMTSDEIYK 445

Query: 640 IL 641
           + 
Sbjct: 446 MF 447


>gi|218662034|ref|ZP_03517964.1| threonyl-tRNA synthetase [Rhizobium etli IE4771]
          Length = 305

 Score =  361 bits (925), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 196/293 (66%), Positives = 239/293 (81%)

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           +P+RLAEFG V+R EPSG+LHGLMRVRGFTQDDAH+FCT EQM  ECLKI++LI+S+Y+D
Sbjct: 1   MPIRLAEFGLVHRYEPSGALHGLMRVRGFTQDDAHIFCTDEQMAAECLKINDLILSVYED 60

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FGF++I+VKLSTRPEKRVGSDALWD AE +M  VL TI+  S+ RI TG+L GEGAFYGP
Sbjct: 61  FGFKEIVVKLSTRPEKRVGSDALWDRAEAVMTDVLKTIEAQSEGRIKTGILPGEGAFYGP 120

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           KFEY LKDAIGR+WQCGT QVDFNLP RF AFY++S+SEK  PVMIHRA+ GS+ERF+GI
Sbjct: 121 KFEYTLKDAIGREWQCGTTQVDFNLPERFGAFYIDSNSEKTQPVMIHRAICGSMERFLGI 180

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IENF G++PLW+SP+Q +V TITS A  Y  E+A  L+   L++ETDFRNE INYKIRE
Sbjct: 181 LIENFAGHMPLWVSPLQVVVATITSEADAYGLEVAEALREAGLNVETDFRNEKINYKIRE 240

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDC 650
           HS+ K+P+II+CG KEA ER++ IRR GS     + L  A+  LT E+ PPD 
Sbjct: 241 HSVTKVPVIIVCGRKEAEERTVNIRRLGSQDQVSMGLDAAVDSLTLEATPPDI 293


>gi|126138470|ref|XP_001385758.1| mitochondrial threonyl tRNA synthetase [Scheffersomyces stipitis
           CBS 6054]
 gi|126093036|gb|ABN67729.1| mitochondrial threonyl tRNA synthetase [Scheffersomyces stipitis
           CBS 6054]
          Length = 449

 Score =  360 bits (924), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 147/441 (33%), Positives = 234/441 (53%), Gaps = 37/441 (8%)

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEI 294
           +   ES  ++++ ++ +  L+       G IF+   G +IF  L+ +M+ ++ K  ++E+
Sbjct: 7   HQEAESSTQNNQTISNKQLLYTTDPLTPGSIFFLPHGTRIFNKLVQFMKNQQTKYGFQEV 66

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAV--------------KCADDTIKDLRTFALKPMN 340
            TP +    LW+ SGHW +Y+ +MF V              + + D  + L  + LKPMN
Sbjct: 67  ITPLIYKSKLWETSGHWQNYKDDMFKVVGNDVSKEHDIHNEQYSHDKSEGLHEYGLKPMN 126

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
           CPGH  +F+   +SY ELP+RL++F S++RNE SG+L GL RVR F QDD H+FC   Q+
Sbjct: 127 CPGHCLIFSKFDRSYNELPIRLSDFSSLHRNEASGALSGLTRVRRFHQDDGHIFCEMGQI 186

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKL---STRPEKRVGSDALWDDAENIMKGVLDTIKN 457
             E     NLI   YK FG  +  ++    +   EK +G    W+ AE  +K VLDT   
Sbjct: 187 NQEIHNTINLIKGTYKVFGIGEKDIEYFLSTRPEEKFMGDIETWNMAEEQLKNVLDTAAG 246

Query: 458 SSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK 517
                 N  +  G GAFYGPK + +L DA  +  Q GTIQ+DF LP+RF+  YV     +
Sbjct: 247 QG----NWQINEGGGAFYGPKIDVLLTDAFNKKHQVGTIQLDFQLPARFDLKYVAEDGTR 302

Query: 518 -CHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLK 576
              P+M+HRAVFGS+ERF  I++++++G  P W++P QA++  + +S VE A+++  +L 
Sbjct: 303 DNQPIMVHRAVFGSLERFFAILLDHYQGKWPFWINPRQAVIVPVNASHVEAAEKLHKMLS 362

Query: 577 SH--------------HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
                           +  ++ D R ET+  +I++   K    II+ GDK+    ++ IR
Sbjct: 363 GDIINSVNDISPITGYNFYVDVDRRAETVGSRIKDAVQKGYSYIIMIGDKDIKNGTVAIR 422

Query: 623 RFGSTTTQKVSLLDAIPILTK 643
              S     +   +      +
Sbjct: 423 TRDSRQIVNLKPEEIYEKFVE 443


>gi|289617913|emb|CBI55490.1| unnamed protein product [Sordaria macrospora]
          Length = 497

 Score =  360 bits (924), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 151/431 (35%), Positives = 221/431 (51%), Gaps = 43/431 (9%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           + E  DHR L  + +LF  +    G   +   G +IF  L+ Y+R++     ++E+ TP 
Sbjct: 49  KPEAPDHRDLGTQQELFMTSIYSPGSPIFLPNGARIFNRLVEYLRKQYVHYGFQEVITPT 108

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADD------TIKDLRTFALKPMNCPGHVAVFNHGL 352
           +  + LW +SGH ++Y  +MF V              ++  + LKPMNCPGH  +F    
Sbjct: 109 IYKKALWAKSGHLENYADDMFTVTSTSPSRADVTEAGEVDEYGLKPMNCPGHCLIFAAQK 168

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
           +SYR+LP+R A+F  ++RNE SG+L GL RVR F QDD H+FC   Q+ +E  K    I 
Sbjct: 169 RSYRDLPIRYADFSPLHRNEISGALSGLTRVRRFHQDDGHIFCRPNQIEDEISKTLEFIR 228

Query: 413 SIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
            +YKDF      +KLSTRPE  +GS   W+ AE  +K  LDT            +  G+G
Sbjct: 229 RVYKDFRLGSYRLKLSTRPENYMGSLEDWEHAEGSLKRALDTSGEPW------TLNEGDG 282

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE---------------- 516
           AFYGPK + ILKD+ G++ Q  TIQ+DF LP RF   Y     E                
Sbjct: 283 AFYGPKIDVILKDSDGKEHQTATIQLDFQLPKRFELEYQAPAPELEAKGETTTDPELLAV 342

Query: 517 --KCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSS--AVEYAQEIA 572
                PVMIHRAV GS ER   ++IE+F G  P WL+P QAIV T+  S   +++A++  
Sbjct: 343 SGPVRPVMIHRAVLGSAERMFALLIEHFNGKWPFWLNPRQAIVLTVNDSEPVLQFARKTQ 402

Query: 573 NLLKS----------HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
            +L              L+I+ D    +++ KIRE   +   ++I+ G K+ +  ++ + 
Sbjct: 403 RVLLGTDSADSHVSPSGLAIDLDDSARSLSLKIREAKTRGYGMVIVVGPKDVANGTVAVD 462

Query: 623 RFGSTTTQKVS 633
             G   T    
Sbjct: 463 ATGGLHTGDKP 473


>gi|269468318|gb|EEZ79994.1| threonyl-tRNA synthetase [uncultured SUP05 cluster bacterium]
          Length = 369

 Score =  359 bits (922), Expect = 7e-97,   Method: Composition-based stats.
 Identities = 192/380 (50%), Positives = 266/380 (70%), Gaps = 13/380 (3%)

Query: 201 MKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAE 260
           MK+AGAYWRGDSN  ML R+YGTAW ++ +L  YLY LEE+EKRDHRK+ +  DLFH+ E
Sbjct: 1   MKLAGAYWRGDSNNEMLQRVYGTAWASKDDLKDYLYRLEEAEKRDHRKIGKTQDLFHMQE 60

Query: 261 DGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMF 319
           +  G++FWH KGW ++Q +  YMR   + +DY+E++TPQ++D+ LW++SGHWD +   MF
Sbjct: 61  EAPGMVFWHEKGWTLYQIVEQYMRSVFRDNDYKEVHTPQLIDKSLWEKSGHWDKFGDAMF 120

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHG 379
                  T  + R +A+KPMNCP H+ ++N GLKSYR+LP+RLAEFGS +RNEPSG+LHG
Sbjct: 121 T------TSSENRDYAVKPMNCPAHIQIYNQGLKSYRDLPLRLAEFGSCHRNEPSGTLHG 174

Query: 380 LMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDA 439
           +MRVR F QDD H+FCT+ Q+ +E     +L   +YK+FGFE + +KLSTRPE RVGSD 
Sbjct: 175 IMRVRNFVQDDGHIFCTENQIQDEVSTFIDLTFDVYKNFGFENVDIKLSTRPENRVGSDE 234

Query: 440 LWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVD 499
           +WD      +      +      I   +  GEGAFYGPK E++LKD + R+WQCGT+QVD
Sbjct: 235 VWD------RAEAALAEALDAKGIKWDLQEGEGAFYGPKIEFVLKDCLDREWQCGTLQVD 288

Query: 500 FNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTT 559
           F++P R NA Y+   + K  PVM+HRA+ GS+ERF+GI+IE+++G  P WL+PIQA++  
Sbjct: 289 FSMPERLNAHYIAEDNSKQTPVMLHRAIVGSLERFVGILIEHYEGAFPSWLAPIQAVILN 348

Query: 560 ITSSAVEYAQEIANLLKSHH 579
           I+    ++   +   LK   
Sbjct: 349 ISEKQHDFVANVEKKLKGGG 368


>gi|164427281|ref|XP_964988.2| threonyl-tRNA synthetase, mitochondrial precursor [Neurospora
           crassa OR74A]
 gi|157071680|gb|EAA35752.2| threonyl-tRNA synthetase, mitochondrial precursor [Neurospora
           crassa OR74A]
          Length = 498

 Score =  359 bits (920), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 148/432 (34%), Positives = 216/432 (50%), Gaps = 43/432 (9%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
            +    DHR L  + +LF  +    G   +   G +IF  L+ Y+R++     ++E+ TP
Sbjct: 49  TKPAAPDHRDLGTQQELFMTSIYSPGSPIFLPNGARIFNRLVEYLRKQYVHYGFQEVITP 108

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADD------TIKDLRTFALKPMNCPGHVAVFNHG 351
            +  + LW +SGH ++Y  +MF V              +   + LKPMNCPGH  +F   
Sbjct: 109 TIYKKALWAKSGHLENYADDMFTVTSTSPSRADVTEAGEADEYGLKPMNCPGHCLIFAAQ 168

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI 411
            +SYR+LP+R A+F  ++RNE SG+L GL RVR F QDD H+FC   Q+ +E  K    I
Sbjct: 169 KRSYRDLPIRYADFSPLHRNEISGALSGLTRVRRFHQDDGHIFCRPNQIEDEISKTLEFI 228

Query: 412 ISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
             +YKDF      +KLSTRPE  +GS   W+ AE  +K  LD             +  G+
Sbjct: 229 RRVYKDFRLGSYRLKLSTRPENHIGSLEDWEHAEGSLKRALDNSGEPW------TLNEGD 282

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE--------------- 516
           GAFYGPK + ILKD+ G++ Q  TIQ+DF LP RF   Y     E               
Sbjct: 283 GAFYGPKIDVILKDSDGKEHQTATIQLDFQLPKRFELEYQAPAPELEAKGETTTDPELLA 342

Query: 517 ---KCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSS--AVEYAQEI 571
                 PVMIHRAV GS ER   ++IE++ G  P WL+P Q IV T+  S   +++A+  
Sbjct: 343 VSGPVRPVMIHRAVLGSAERMFALLIEHYNGKWPFWLNPRQGIVLTVNDSEPVLQFARNT 402

Query: 572 ANLLKS----------HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
             +L              L+++ D    +++ KIRE   K   +II+ G K+ +  ++ +
Sbjct: 403 QKVLLGTDSADVHVSPSGLAVDLDDSARSLSLKIREAKTKGYGMIIVVGPKDIANGTVTV 462

Query: 622 RRFGSTTTQKVS 633
              G   T    
Sbjct: 463 DATGGLQTGDKP 474


>gi|38567275|emb|CAE76565.1| related to threonine--tRNA ligase [Neurospora crassa]
          Length = 497

 Score =  359 bits (920), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 148/432 (34%), Positives = 216/432 (50%), Gaps = 43/432 (9%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
            +    DHR L  + +LF  +    G   +   G +IF  L+ Y+R++     ++E+ TP
Sbjct: 48  TKPAAPDHRDLGTQQELFMTSIYSPGSPIFLPNGARIFNRLVEYLRKQYVHYGFQEVITP 107

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADD------TIKDLRTFALKPMNCPGHVAVFNHG 351
            +  + LW +SGH ++Y  +MF V              +   + LKPMNCPGH  +F   
Sbjct: 108 TIYKKALWAKSGHLENYADDMFTVTSTSPSRADVTEAGEADEYGLKPMNCPGHCLIFAAQ 167

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI 411
            +SYR+LP+R A+F  ++RNE SG+L GL RVR F QDD H+FC   Q+ +E  K    I
Sbjct: 168 KRSYRDLPIRYADFSPLHRNEISGALSGLTRVRRFHQDDGHIFCRPNQIEDEISKTLEFI 227

Query: 412 ISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
             +YKDF      +KLSTRPE  +GS   W+ AE  +K  LD             +  G+
Sbjct: 228 RRVYKDFRLGSYRLKLSTRPENHIGSLEDWEHAEGSLKRALDNSGEPW------TLNEGD 281

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE--------------- 516
           GAFYGPK + ILKD+ G++ Q  TIQ+DF LP RF   Y     E               
Sbjct: 282 GAFYGPKIDVILKDSDGKEHQTATIQLDFQLPKRFELEYQAPAPELEAKGETTTDPELLA 341

Query: 517 ---KCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSS--AVEYAQEI 571
                 PVMIHRAV GS ER   ++IE++ G  P WL+P Q IV T+  S   +++A+  
Sbjct: 342 VSGPVRPVMIHRAVLGSAERMFALLIEHYNGKWPFWLNPRQGIVLTVNDSEPVLQFARNT 401

Query: 572 ANLLKS----------HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
             +L              L+++ D    +++ KIRE   K   +II+ G K+ +  ++ +
Sbjct: 402 QKVLLGTDSADVHVSPSGLAVDLDDSARSLSLKIREAKTKGYGMIIVVGPKDIANGTVTV 461

Query: 622 RRFGSTTTQKVS 633
              G   T    
Sbjct: 462 DATGGLQTGDKP 473


>gi|302552824|ref|ZP_07305166.1| threonyl-tRNA synthetase [Streptomyces viridochromogenes DSM 40736]
 gi|302470442|gb|EFL33535.1| threonyl-tRNA synthetase [Streptomyces viridochromogenes DSM 40736]
          Length = 416

 Score =  359 bits (920), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 131/414 (31%), Positives = 199/414 (48%), Gaps = 18/414 (4%)

Query: 233 QYLYFLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDD 290
            +      + + DHR+L RE+DLF        G+ +W   G  +  TL  Y+R  + +  
Sbjct: 1   MHPEEPTMTTQPDHRRLGRELDLFDTDPLMGAGLPYWLPDGAIVRHTLEEYVREAERRAG 60

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH 350
           Y  + +P +  + L++ SGHWD Y  +MF                L+P  CP H  ++  
Sbjct: 61  YRHVYSPVLGKRELYEISGHWDHYSEDMFPPMELG-----AEQVLLRPSLCPHHALIYRS 115

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
              SYRELP+R+AE G +YR+E SG L GL RVR  T +DAH+FCT EQ   E      L
Sbjct: 116 RSHSYRELPLRMAELGGMYRSELSGVLGGLTRVRAITLNDAHIFCTLEQAVEEARSALEL 175

Query: 411 IISIYKDFGFEKIMVKLSTRPE--KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
           I   Y D G      +LS   E  K V    LW  A  +++ VLD         I     
Sbjct: 176 IGRAYADLGIRPARYRLSLPGEGGKYVADPELWRRATALLREVLD------GSGIRYEAA 229

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
            GE AFYGPK +  + D  GR+    T+Q+DF+ P RF+  Y+     K  PVM+HR++ 
Sbjct: 230 EGEAAFYGPKIDVQITDPAGREATLSTVQIDFHQPERFDLHYIGPDGAKHRPVMVHRSII 289

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIET-DFR 587
           GS+ER +  ++E+  G  P WL+P+Q  +  +     E+A E+A   +   L  E  D  
Sbjct: 290 GSVERAVAHLVESHGGAFPPWLAPVQLAILPVADEQAEHAHELARRARDLGLRAEVADPA 349

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
             T+  +IR   +  +P   + G +EA+   + +R       + +   + +  +
Sbjct: 350 EGTLAARIRAARL--VPYQAVIGAREAAAGLVAVRLRDGHRPEPLPAAELLRRV 401


>gi|332220155|ref|XP_003259223.1| PREDICTED: threonyl-tRNA synthetase, mitochondrial isoform 2
           [Nomascus leucogenys]
          Length = 588

 Score =  358 bits (918), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 146/392 (37%), Positives = 216/392 (55%), Gaps = 22/392 (5%)

Query: 276 FQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCA---------- 324
              L    + +  +  + E+ TP +    LW+QSGHW+ Y+ +MFAV+            
Sbjct: 202 RDQLRQLFKAEYARRGFSEVKTPTLFSTKLWEQSGHWEHYQEDMFAVQPPGSDRPPSSQS 261

Query: 325 DDTIKDLRT-FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRV 383
           DD+ + +    ALKPMNCP H  +F H  +S+RELP+RLA+FG+++R E SGSL GL R+
Sbjct: 262 DDSTRHITDTLALKPMNCPAHCLMFAHRPRSWRELPLRLADFGALHRAEASGSLRGLTRL 321

Query: 384 RGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDD 443
           R F QDDAH+FCT +Q+  E     + + S+Y   GF   +  LSTRP   +G   LWD 
Sbjct: 322 RCFQQDDAHIFCTTDQLEAEIQSCLDFLRSVYAVLGFSFRLA-LSTRPSGFLGDPCLWDQ 380

Query: 444 AENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLP 503
           AE ++K  L              +  G+GAFYGPK +  L DA+GR  QCGTIQ+DF LP
Sbjct: 381 AEQVLKQALKEFGEPWD------LNSGDGAFYGPKIDVHLHDALGRPHQCGTIQLDFQLP 434

Query: 504 SRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSS 563
            RF+  Y         PV+IHRAV GS+ER +G++ E+  G  PLWLSP Q +V  + + 
Sbjct: 435 LRFDLQYKGQAGALERPVLIHRAVLGSMERLLGVLAESCGGKWPLWLSPFQVVVIPVGTE 494

Query: 564 AVEYAQEIANLLKSHHLSIETD-FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
             EYA+E    L++  L  + D     T++ +IR+  +       + G KE S+R++ IR
Sbjct: 495 QEEYAREAQQSLQAAGLVSDLDADSGLTLSRRIRQAQLAHYNFQFVVGQKEQSKRTVNIR 554

Query: 623 RFGSTTTQKVSLLDAIPILTK--ESLPPDCQK 652
              +    +  L +A+  L +   +  P+ ++
Sbjct: 555 TRDNRRLGEWDLPEAVQRLVELQNTRVPNAEE 586



 Score =  142 bits (359), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 50/155 (32%), Positives = 78/155 (50%), Gaps = 5/155 (3%)

Query: 2   PSDIKLTFP-DGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           P  IK++ P D  I     + T   +A  IS +LA  AVA  +NG+  DL  P+  +  +
Sbjct: 58  PRTIKISLPGDQKIDAVAWNTTPYQLARQISSTLADTAVAAQVNGEPYDLERPLETDSDL 117

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD--KEQPFSSD 117
             +T + P   AV  HS  H++  A +  +    +  GP  E GFY+DF   KE+     
Sbjct: 118 RFLTFDSPEGKAVFWHSSTHVLGAAAEQ-FLGAVLCRGPSTEYGFYHDFFLGKERTIRGS 176

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFES 152
           EL  +E+  QE+ A   PF +   S ++ R+LF++
Sbjct: 177 ELPVLERICQELTAAAQPFRRLEASRDQLRQLFKA 211


>gi|115376687|ref|ZP_01463915.1| threonyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|115366304|gb|EAU65311.1| threonyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
          Length = 372

 Score =  357 bits (917), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 160/367 (43%), Positives = 231/367 (62%), Gaps = 13/367 (3%)

Query: 265 VIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKC 323
           ++FWH +G+ ++Q L   +RR++    Y E+ TPQVL Q +W+ SGHW ++R  MF +  
Sbjct: 1   MVFWHPRGFVLYQLLEERVRRELASGGYREVRTPQVLGQRIWESSGHWQNFRHGMFVLDD 60

Query: 324 ADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRV 383
            +      R FA+KP++CPGH+ +F     S+R LP+R+AEFG V+RNE SG+LHGL R+
Sbjct: 61  GE------RPFAMKPVSCPGHIQLFQRLAPSFRSLPLRMAEFGLVHRNESSGALHGLFRL 114

Query: 384 RGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDD 443
           R FTQDD H+FC +EQ+ +E       + + Y+ FGFE   V  S+RP +R G DALWD 
Sbjct: 115 RQFTQDDGHIFCMEEQVADEVAAFCRSLRAFYRGFGFEDAQVAFSSRPAQRAGDDALWD- 173

Query: 444 AENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLP 503
                +     ++ + +  ++  +  GEGAFYGPK E+ILKD  GRDWQCGTIQ+DF LP
Sbjct: 174 -----RAEAALLEAAGRVGLDCRMQPGEGAFYGPKLEFILKDRSGRDWQCGTIQLDFVLP 228

Query: 504 SRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSS 563
            RF+  YV+S  EK  P M+HRA+FGS+ERF+GI++E+ +G LP WL+P Q  V  + + 
Sbjct: 229 ERFDLHYVDSGGEKRRPAMLHRAIFGSVERFLGILLEHHQGVLPAWLAPEQVRVLPVGAD 288

Query: 564 AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRR 623
           +  YA E+   L +  L +E D R ET++ +I E     +P  ++ G +E + RSI IR 
Sbjct: 289 SHAYAAEVQEHLLAAGLRVEADARGETLSRRILEAHQDAVPFAVLVGPREQAGRSIQIRE 348

Query: 624 FGSTTTQ 630
            G     
Sbjct: 349 RGGAQRN 355


>gi|254579094|ref|XP_002495533.1| ZYRO0B13596p [Zygosaccharomyces rouxii]
 gi|238938423|emb|CAR26600.1| ZYRO0B13596p [Zygosaccharomyces rouxii]
          Length = 454

 Score =  357 bits (916), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 147/441 (33%), Positives = 224/441 (50%), Gaps = 36/441 (8%)

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYM--RRK 286
                       S    H    R+  LF       G IF+   G KIF  LI +M  +++
Sbjct: 18  NLSKIAKKPPGSSADASHEVSNRQK-LFITDPISPGSIFFLPNGTKIFNKLIQFMKLQQQ 76

Query: 287 IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA 346
            K  ++E+ TP +  + LW+QSGHWD+Y+ +MF V+  D +      + LKPMNCPGH  
Sbjct: 77  FKYGFKEVVTPLIYRKSLWEQSGHWDNYKEDMFRVEGHDTS---KEEYGLKPMNCPGHCM 133

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           VF    +SY ELP+RL++F  ++RNE SG+L GL RVR F QDD H+FCT +Q+ +E  K
Sbjct: 134 VFKRFDRSYSELPLRLSDFSPLHRNEASGALSGLTRVRKFHQDDGHIFCTPDQVESEIAK 193

Query: 407 IHNLIISIYKD-------FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSS 459
              L+   Y            E   ++LSTRPE  +G   +WD AE ++K +L+      
Sbjct: 194 CLKLVDMCYTKVFPLSPELANEVYTLELSTRPEHFIGDVKVWDYAETVLKNILNKFGKPW 253

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
           +      +   +GAFYGPK +  + D  G+  Q  TIQ+DF LP RF+  Y +  +    
Sbjct: 254 E------LNEADGAFYGPKIDIKVTDHTGKYHQVATIQLDFQLPERFDLKYKDRDNTYKR 307

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSS---AVEYAQEIANLLK 576
           P+MIHRAVFGS+ERF+ I+I++  G  P WL+P QA++  + +     V+  +++   L+
Sbjct: 308 PIMIHRAVFGSVERFMAILIDSNHGKWPFWLNPRQAMIIPVNTKRQGQVDACKDLFLKLR 367

Query: 577 SHH--------------LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
                             + + D R E + Y+I++  +K    +II GDKE       IR
Sbjct: 368 GQGNENSTDPIPLNSFHFNADLDERPEPVGYRIKDALMKNYSYLIIIGDKEVETGRYAIR 427

Query: 623 RFGSTTTQKVSLLDAIPILTK 643
                  + ++  +      +
Sbjct: 428 TREDRQLEHLTDDEIFNKFRE 448


>gi|114559281|ref|XP_001168852.1| PREDICTED: threonyl-tRNA synthetase, mitochondrial isoform 5 [Pan
           troglodytes]
 gi|10434068|dbj|BAB14117.1| unnamed protein product [Homo sapiens]
 gi|55958997|emb|CAI15489.1| threonyl-tRNA synthetase 2, mitochondrial (putative) [Homo sapiens]
 gi|119573934|gb|EAW53549.1| threonyl-tRNA synthetase-like 1, isoform CRA_b [Homo sapiens]
          Length = 588

 Score =  357 bits (916), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 146/392 (37%), Positives = 213/392 (54%), Gaps = 22/392 (5%)

Query: 276 FQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCA---------- 324
              L    + +     + E+ TP +    LW+QSGHW+ Y+ +MFAV+            
Sbjct: 202 RDQLRQLFKAEYAHRGFSEVKTPTLFSTKLWEQSGHWEHYQEDMFAVQPPGSDRPPSSQS 261

Query: 325 DDTIKDLRT-FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRV 383
           DD+ + +    ALKPMNCP H  +F H  +S+RELP+RLA+FG+++R E SG L GL R+
Sbjct: 262 DDSTRHITDTLALKPMNCPAHCLMFAHRPRSWRELPLRLADFGALHRAEASGGLGGLTRL 321

Query: 384 RGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDD 443
           R F QDDAH+FCT +Q+  E     + + S+Y   GF   +  LSTRP   +G   LWD 
Sbjct: 322 RCFQQDDAHIFCTTDQLEAEIQSCLDFLRSVYAVLGFSFRLA-LSTRPSGFLGDPCLWDQ 380

Query: 444 AENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLP 503
           AE ++K  L              +  G+GAFYGPK +  L DA+GR  QCGTIQ+DF LP
Sbjct: 381 AEQVLKQALKEFGEPWD------LNSGDGAFYGPKIDVHLHDALGRPHQCGTIQLDFQLP 434

Query: 504 SRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSS 563
            RF+  Y         PV+IHRAV GS+ER +G++ E+  G  PLWLSP Q +V  + S 
Sbjct: 435 LRFDLQYKGQAGALERPVLIHRAVLGSVERLLGVLAESCGGKWPLWLSPFQVVVIPVGSE 494

Query: 564 AVEYAQEIANLLKSHHLSIETD-FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
             EYA+E    L++  L  + D     T++ +IR   +       + G KE S+R++ IR
Sbjct: 495 QEEYAKEAQQSLRAAGLVSDLDADSGLTLSRRIRRAQLAHYNFQFVVGQKEQSKRTVNIR 554

Query: 623 RFGSTTTQKVSLLDAIPILTK--ESLPPDCQK 652
              +    +  L +A+  L +   +  P+ ++
Sbjct: 555 TRDNRRLGEWDLPEAVQRLVELQNTRVPNAEE 586



 Score =  140 bits (352), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 50/155 (32%), Positives = 78/155 (50%), Gaps = 5/155 (3%)

Query: 2   PSDIKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           P  IK++ P G  I     + T   +A  IS +LA  AVA  +NG+  DL  P+  +  +
Sbjct: 58  PRTIKISLPGGQKIDAVAWNTTPYQLARQISSTLADTAVAAQVNGEPYDLERPLETDSDL 117

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD--KEQPFSSD 117
             +T + P   AV  HS  H++  A +  +    +  GP  E GFY+DF   KE+     
Sbjct: 118 RFLTFDSPEGKAVFWHSSTHVLGAAAEQ-FLGAVLCRGPSTEYGFYHDFFLGKERTIRGS 176

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFES 152
           EL  +E+  QE+ A   PF +   S ++ R+LF++
Sbjct: 177 ELPVLERICQELTAAARPFRRLEASRDQLRQLFKA 211


>gi|114559275|ref|XP_001168898.1| PREDICTED: threonyl-tRNA synthetase-like 1 isoform 7 [Pan
           troglodytes]
          Length = 636

 Score =  357 bits (915), Expect = 5e-96,   Method: Composition-based stats.
 Identities = 145/382 (37%), Positives = 210/382 (54%), Gaps = 21/382 (5%)

Query: 285 RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCA----------DDTIKDLRT- 333
                 + E+ TP +    LW+QSGHW+ Y+ +MFAV+            DD+ + +   
Sbjct: 260 EYAHRGFSEVKTPTLFSTKLWEQSGHWEHYQEDMFAVQPPGSDRPPSSQSDDSTRHITDT 319

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
            ALKPMNCP H  +F H  +S+RELP+RLA+FG+++R E SG L GL R+R F QDDAH+
Sbjct: 320 LALKPMNCPAHCLMFAHRPRSWRELPLRLADFGALHRAEASGGLGGLTRLRCFQQDDAHI 379

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
           FCT +Q+  E     + + S+Y   GF   +  LSTRP   +G   LWD AE ++K  L 
Sbjct: 380 FCTTDQLEAEIQSCLDFLRSVYAVLGFSFRLA-LSTRPSGFLGDPCLWDQAEQVLKQALK 438

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS 513
                        +  G+GAFYGPK +  L DA+GR  QCGTIQ+DF LP RF+  Y   
Sbjct: 439 EFGEPWD------LNSGDGAFYGPKIDVHLHDALGRPHQCGTIQLDFQLPLRFDLQYKGQ 492

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIAN 573
                 PV+IHRAV GS+ER +G++ E+  G  PLWLSP Q +V  + S   EYA+E   
Sbjct: 493 AGALERPVLIHRAVLGSVERLLGVLAESCGGKWPLWLSPFQVVVIPVGSEQEEYAKEAQQ 552

Query: 574 LLKSHHLSIETD-FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
            L++  L  + D     T++ +IR   +       + G KE S+R++ IR   +    + 
Sbjct: 553 SLRAAGLVSDLDADSGLTLSRRIRRAQLAHYNFQFVVGQKEQSKRTVNIRTRDNRRLGEW 612

Query: 633 SLLDAIPILTK--ESLPPDCQK 652
            L +A+  L +   +  P+ ++
Sbjct: 613 DLPEAVQRLVELQNTRVPNAEE 634



 Score =  173 bits (438), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 65/197 (32%), Positives = 100/197 (50%), Gaps = 7/197 (3%)

Query: 2   PSDIKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           P  IK++ P G  I     + T   +A  IS +LA  AVA  +NG+  DL  P+  +  +
Sbjct: 58  PRTIKISLPGGQKIDAVAWNTTPYQLARQISSTLADTAVAAQVNGEPYDLERPLETDSDL 117

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD--KEQPFSSD 117
             +T + P   AV  HS  H++  A +  +    +  GP  E GFY+DF   KE+     
Sbjct: 118 RFLTFDSPEGKAVFWHSSTHVLGAAAEQ-FLGAVLCRGPSTEYGFYHDFFLGKERTIRGS 176

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           EL  +E+  QE+ A   PF +   S ++ R+LF+     +K+ ++E        T+Y  G
Sbjct: 177 ELPVLERICQELTAAARPFRRLEASRDQLRQLFK--DNPFKLHLIEEKVTGPTATVYGCG 234

Query: 178 EWFDLCRGPHVRSTGQV 194
              DLC+GPH+R TGQ+
Sbjct: 235 TLVDLCQGPHLRHTGQI 251


>gi|114559285|ref|XP_001168667.1| PREDICTED: threonyl-tRNA synthetase-like 1 isoform 1 [Pan
           troglodytes]
 gi|55958998|emb|CAI15490.1| threonyl-tRNA synthetase 2, mitochondrial (putative) [Homo sapiens]
          Length = 443

 Score =  357 bits (915), Expect = 5e-96,   Method: Composition-based stats.
 Identities = 145/382 (37%), Positives = 210/382 (54%), Gaps = 21/382 (5%)

Query: 285 RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCA----------DDTIKDLRT- 333
                 + E+ TP +    LW+QSGHW+ Y+ +MFAV+            DD+ + +   
Sbjct: 67  EYAHRGFSEVKTPTLFSTKLWEQSGHWEHYQEDMFAVQPPGSDRPPSSQSDDSTRHITDT 126

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
            ALKPMNCP H  +F H  +S+RELP+RLA+FG+++R E SG L GL R+R F QDDAH+
Sbjct: 127 LALKPMNCPAHCLMFAHRPRSWRELPLRLADFGALHRAEASGGLGGLTRLRCFQQDDAHI 186

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
           FCT +Q+  E     + + S+Y   GF   +  LSTRP   +G   LWD AE ++K  L 
Sbjct: 187 FCTTDQLEAEIQSCLDFLRSVYAVLGFSFRLA-LSTRPSGFLGDPCLWDQAEQVLKQALK 245

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS 513
                        +  G+GAFYGPK +  L DA+GR  QCGTIQ+DF LP RF+  Y   
Sbjct: 246 EFGEPWD------LNSGDGAFYGPKIDVHLHDALGRPHQCGTIQLDFQLPLRFDLQYKGQ 299

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIAN 573
                 PV+IHRAV GS+ER +G++ E+  G  PLWLSP Q +V  + S   EYA+E   
Sbjct: 300 AGALERPVLIHRAVLGSVERLLGVLAESCGGKWPLWLSPFQVVVIPVGSEQEEYAKEAQQ 359

Query: 574 LLKSHHLSIETD-FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
            L++  L  + D     T++ +IR   +       + G KE S+R++ IR   +    + 
Sbjct: 360 SLRAAGLVSDLDADSGLTLSRRIRRAQLAHYNFQFVVGQKEQSKRTVNIRTRDNRRLGEW 419

Query: 633 SLLDAIPILTK--ESLPPDCQK 652
            L +A+  L +   +  P+ ++
Sbjct: 420 DLPEAVQRLVELQNTRVPNAEE 441


>gi|38537103|gb|AAR23527.1| threonyl-tRNA synthetase [Homo sapiens]
          Length = 443

 Score =  356 bits (914), Expect = 6e-96,   Method: Composition-based stats.
 Identities = 145/382 (37%), Positives = 210/382 (54%), Gaps = 21/382 (5%)

Query: 285 RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCA----------DDTIKDLRT- 333
                 + E+ TP +    LW+QSGHW+ Y+ +MFAV+            DD+ + +   
Sbjct: 67  EYAHRGFSEVKTPTLFSTKLWEQSGHWEHYQEDMFAVQPPGSDRPPSSQSDDSTRHITDT 126

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
            ALKPMNCP H  +F H  +S+RELP+RLA+FG+++R E SG L GL R+R F QDDAH+
Sbjct: 127 LALKPMNCPAHCLMFAHRPRSWRELPLRLADFGALHRAEASGGLGGLTRLRCFQQDDAHI 186

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
           FCT +Q+  E     + + S+Y   GF   +  LSTRP   +G   LWD AE ++K  L 
Sbjct: 187 FCTTDQLEAEIQSCLDFLRSVYAVLGFSFRLA-LSTRPSGFLGDPCLWDQAEQVLKQALK 245

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS 513
                        +  G+GAFYGPK +  L DA+GR  QCGTIQ+DF LP RF+  Y   
Sbjct: 246 EFGEPWD------LNSGDGAFYGPKIDVHLHDALGRPHQCGTIQLDFQLPLRFDLQYKGQ 299

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIAN 573
                 PV+IHRAV GS+ER +G++ E+  G  PLWLSP Q +V  + S   EYA+E   
Sbjct: 300 AGALERPVLIHRAVLGSVERLLGVLAESCGGKWPLWLSPFQVVVIPVGSEQEEYAKEARQ 359

Query: 574 LLKSHHLSIETD-FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
            L++  L  + D     T++ +IR   +       + G KE S+R++ IR   +    + 
Sbjct: 360 SLRAAGLVSDLDADSGLTLSRRIRRAQLAHYNFQFVVGQKEQSKRTVNIRTRDNRRLGEW 419

Query: 633 SLLDAIPILTK--ESLPPDCQK 652
            L +A+  L +   +  P+ ++
Sbjct: 420 DLPEAVQRLVELQNTRVPNAEE 441


>gi|221109010|ref|XP_002168836.1| PREDICTED: hypothetical protein, partial [Hydra magnipapillata]
          Length = 384

 Score =  356 bits (914), Expect = 6e-96,   Method: Composition-based stats.
 Identities = 149/391 (38%), Positives = 231/391 (59%), Gaps = 11/391 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            IK+T PDGS++ F    T  DVA++IS   A+  ++ + N    + S P+  +G++ + 
Sbjct: 1   MIKVTLPDGSVREFAQGVTPMDVAKNISEGFARNVISASYNDTTIETSTPLTTDGNLTLY 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
           T  D        HS +H+MA+A++ ++  +++ +GP I++GFYYD D  +   +  +  +
Sbjct: 61  TWNDKEGKKAFWHSTSHVMAQALEEMYSGIKLTLGPAIDNGFYYDVDFGDNKITDADFKK 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE ++ EI      F  + +S  +A E+++     YK E++ ++     +T      +FD
Sbjct: 121 IEDRVLEISREKHEFKMRSVSKAEALEVYK--NNEYKTELISNL-EDGTITFCDHANFFD 177

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRG H+ +TG +K   K+M +AGAYWRGD     L+R+YGT++  Q++LT YL  LEE+
Sbjct: 178 LCRGGHIPNTGIIK-AVKIMSIAGAYWRGDEKNKQLTRVYGTSFPKQKDLTDYLELLEEA 236

Query: 242 EKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
           ++RDHRKL +E+DLFH     G G+  W  KG  +   L  ++++ + K  YE++ TP +
Sbjct: 237 KRRDHRKLGKELDLFHFSQRVGQGLPLWLPKGAALRDRLEQFLKKAQKKAGYEQVVTPHI 296

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             + L+  SGH+  Y A+ F       T  +   F LKPMNCP H  ++N    SY++LP
Sbjct: 297 GQKELYVTSGHYAKYGADSFQ---PITTPAEGEEFLLKPMNCPHHCEIYNSRPWSYKDLP 353

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
            R AEFG+VYR E SG LHGL RVRGFTQDD
Sbjct: 354 KRYAEFGTVYRYEQSGELHGLTRVRGFTQDD 384


>gi|148982342|ref|ZP_01816719.1| threonyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
 gi|145960522|gb|EDK25885.1| threonyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
          Length = 304

 Score =  356 bits (913), Expect = 7e-96,   Method: Composition-based stats.
 Identities = 153/300 (51%), Positives = 201/300 (67%), Gaps = 6/300 (2%)

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           V +FN GLKSYR+LP+R+AEFGS +RNEPSG+LHG+MRVRGFTQDDAHVFCT++Q+  E 
Sbjct: 1   VQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGIMRVRGFTQDDAHVFCTEDQVQQEV 60

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
                ++   Y  FGFE I+VKLSTRPE+RVGSD +WD AE  +K  L++++      I 
Sbjct: 61  KACIEMVYDTYTTFGFENIVVKLSTRPEQRVGSDEMWDRAEADLKLALESME------IA 114

Query: 465 TGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIH 524
             +  GEGAFYGPK E+ L D + R WQCGT+Q+DF LP R  A YV   +E+  PVMIH
Sbjct: 115 YEIQEGEGAFYGPKIEFTLHDCLDRAWQCGTVQLDFALPERLGATYVGEDNERHTPVMIH 174

Query: 525 RAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIET 584
           RA+ GS+ERFIGI+IE + G  P WL+P QA+V  IT    EY QEI   L+     ++ 
Sbjct: 175 RAILGSLERFIGILIEEYAGFFPTWLAPEQAVVMGITDKQSEYVQEITKKLQKSGFRVKA 234

Query: 585 DFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           D RNE I +KIREH++K++P +++CGD+E     I +R        K  + D I  +  E
Sbjct: 235 DLRNEKIGFKIREHTLKRVPFMLVCGDQEMEAGEIAVRTRKGKDLGKFKVDDFISYIQAE 294


>gi|50420561|ref|XP_458817.1| DEHA2D08206p [Debaryomyces hansenii CBS767]
 gi|49654484|emb|CAG86963.1| DEHA2D08206p [Debaryomyces hansenii]
          Length = 474

 Score =  355 bits (911), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 141/431 (32%), Positives = 231/431 (53%), Gaps = 37/431 (8%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTP 297
           +ES  + +  ++ +  L+       G IF+   G +IF  L+ +M+ +++K  ++E+ TP
Sbjct: 35  KESSTQANHAISNKQLLYTTDSLTPGSIFFLPHGTRIFNKLVHFMKNQQLKYGFQEVITP 94

Query: 298 QVLDQHLWQQSGHWDSYRANMFAV-------------KCADDTIKDLRTFALKPMNCPGH 344
            +    LW+ SGHW++Y+ +MF V             +   D  + L  + LKPMNCPGH
Sbjct: 95  LIYKTKLWEMSGHWENYKEDMFKVVGNDLSKEEDISHEHNHDDSEGLHDYGLKPMNCPGH 154

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +F+   +SY ELP+R ++F S++RNE SG+L GL RVR F QDD H+FC   Q+ +E 
Sbjct: 155 CLIFSKFERSYNELPIRYSDFSSLHRNEASGALSGLTRVRRFHQDDGHIFCELYQIQDEI 214

Query: 405 LKIHNLIISIYKDFGFEKIMVKL----STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQ 460
               NLI   YK FG + +        +   +K +G    W+DAE+ +  VLD       
Sbjct: 215 TNTINLIKDTYKVFGIDSVKDVEFFLSTRPTDKFMGDITTWNDAESQLTNVLDNTAGRG- 273

Query: 461 DRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK-CH 519
              N  +  G+GAFYGPK + +LKDA  +  Q GTIQ+DF LPSRF   Y++    +   
Sbjct: 274 ---NWSIREGDGAFYGPKIDILLKDAFDKKHQVGTIQLDFQLPSRFKLNYISKDGNRDNQ 330

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLL---- 575
           P+MIHRAVFGS+ERF  I++++++G  P W++P QA++  +  +  + A  +   L    
Sbjct: 331 PIMIHRAVFGSLERFFAILLDHYQGKWPFWINPRQAVIIPVNDTHHDAAVALQKKLVGDI 390

Query: 576 ----------KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
                       ++  ++ D R+ET+  +I++ + K    I++ GDK+    ++ IR   
Sbjct: 391 MDDTVEVSPMTGYNFYVDVDSRSETVGNRIKDATQKGYSYILMLGDKDLQNGTVAIRSRD 450

Query: 626 STTTQKVSLLD 636
                 ++  +
Sbjct: 451 DRKISNLTPEE 461


>gi|156842346|ref|XP_001644541.1| hypothetical protein Kpol_1052p30 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156115186|gb|EDO16683.1| hypothetical protein Kpol_1052p30 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 463

 Score =  355 bits (911), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 145/447 (32%), Positives = 235/447 (52%), Gaps = 38/447 (8%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYM-- 283
            ++            S       ++ +  +F       G +F+   G KIF  L+ +M  
Sbjct: 20  TSKHAAAGANKNNGNSVANTSHDVSVKQKIFITDPISPGSVFFLPNGAKIFNKLVQFMKL 79

Query: 284 RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPG 343
           +++ K  ++E+ TP +  + LW+QSGHW++Y+ +MF V+  D +      + LKPMNCPG
Sbjct: 80  QQEHKFGFKEVITPIIYRKSLWEQSGHWENYKEDMFKVEGQDIS---KEEYGLKPMNCPG 136

Query: 344 HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE 403
           H  +F    +SY ELP+RL++F  ++RNE SG+L GL RVR F QDD H+FCTKEQ+  E
Sbjct: 137 HCMIFKKFDRSYHELPLRLSDFSPLHRNEASGALSGLTRVRKFHQDDGHIFCTKEQVEEE 196

Query: 404 CLKIHNLIISIYKDF---------GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDT 454
            +K   ++   Y                 ++KLSTRP+K +G   +W+ AE+ +K +L+ 
Sbjct: 197 IIKCLKMVDLCYSRVFNFNKSKNNDSSSYIIKLSTRPDKYIGDLEIWNHAEDTLKSILEK 256

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH 514
                       +  G+GAFYGPK + ++KD   +  Q  TIQ+DF LP RFN  Y +  
Sbjct: 257 SGKKWD------INEGDGAFYGPKIDILVKDHNNKTHQVATIQLDFQLPERFNLRYKDKD 310

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSS---AVEYAQEI 571
           +    P+MIHRA FGS+ERFI ++I++ +G  P WL+P QA++  + +     V  ++++
Sbjct: 311 NSYKRPIMIHRAAFGSLERFIAMLIDSNEGKWPFWLNPRQAMIIPVNTKIKSHVSESKQL 370

Query: 572 ANLLK---------------SHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASE 616
           A+ L+               S H +++ D R+E + Y+I++  +K    +II GD+E   
Sbjct: 371 ASKLRGESADLDDLTPVPFNSFHFNVDVDLRSEPVGYRIKDAIMKNYSYLIIIGDEEVET 430

Query: 617 RSIGIRRFGSTTTQKVSLLDAIPILTK 643
               IR       Q ++  +      K
Sbjct: 431 GRYAIRTSEDRRLQHLTEDEIFDKFMK 457


>gi|47221603|emb|CAF97868.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 604

 Score =  355 bits (911), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 154/519 (29%), Positives = 238/519 (45%), Gaps = 58/519 (11%)

Query: 173 LYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELT 232
           +YR+G         HV     +       K   A     + +  LSR+       +    
Sbjct: 85  VYREGASEFGLYCDHVLRNSSLSLSDVEEKCKQAA----ALKLPLSRLEVNTEEARVLFQ 140

Query: 233 QYLYFLEESEKRDH----RKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK 288
                L+  E +           + +LF   +   G  F+  KG  I+ TL  +++ + +
Sbjct: 141 SSKLRLQLIEDQTSGSSITVYRHDQELFFFNDVSPGSCFFLPKGAHIYNTLTDFIKGEYR 200

Query: 289 D-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
              + E+ TP +    LW++SGHW+ Y  NMF V            +ALKPMNCP H  +
Sbjct: 201 RRGFTEVVTPTLYSTALWERSGHWEHYSDNMFTVTSEGSHT-----YALKPMNCPAHCLM 255

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
           F   ++S++ELP+R A+FG+++RNE SG+L GL RVR F QDDAH+FC  EQ+  E +  
Sbjct: 256 FEQRVRSWKELPLRWADFGALHRNELSGALGGLTRVRRFCQDDAHIFCAPEQLETEIVSC 315

Query: 408 HNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIM------------------K 449
            + +  +Y+ FGF      LSTRP   +G    WD+AE                     +
Sbjct: 316 LDFVRHVYQVFGF-SFHCLLSTRPTPCLGEPEQWDNAEQGAAAGEEPAAVWPTLGAEPRR 374

Query: 450 GVLDTIKNSSQDRINTGV---------------LLGE------GAFYGPKFEYILKDAIG 488
             L   K   ++ +  G                  GE           P+ +  ++DAIG
Sbjct: 375 RSLLWTKGEQEEDLGPGPGRRRSVGYFTSQSSPDEGEEGRQTRSCVLSPQIDIQIRDAIG 434

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPL 548
           R  QC TIQ+DF LP RF+  YV    +   PVMIHRAV GS+ER I I+ ENF G  PL
Sbjct: 435 RQHQCATIQLDFQLPLRFDLQYVGPDGQLHRPVMIHRAVLGSLERMIAILAENFGGKWPL 494

Query: 549 WLSPIQAIVTTITSSAVEYAQE---IANLLKSHHLSIETD-FRNETINYKIREHSIKKIP 604
           WLSP Q +V  +   +  Y+++   +    +     ++ +  +  T+N KIR   + +  
Sbjct: 495 WLSPAQVMVIPVGGDSESYSKQVSGVVQEFRHAGFMVDLNSDQGATLNKKIRSAQLSQYN 554

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            I + G+KE+  R++ +R  G     +    + +  LT+
Sbjct: 555 YIFVVGEKESESRTVSVRSRGGKQLGRRPTEEVLTSLTQ 593


>gi|320583490|gb|EFW97703.1| Mitochondrial threonyl-tRNA synthetase [Pichia angusta DL-1]
          Length = 427

 Score =  354 bits (909), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 146/417 (35%), Positives = 233/417 (55%), Gaps = 24/417 (5%)

Query: 249 LAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQ 307
           +A +  L+ I     G +F+   G +IF  L+ +M+ ++ K  + E+ +P +  + LW+ 
Sbjct: 19  IATKQQLYMIDASSPGSVFFLPHGTRIFNRLVQFMKIQQEKHGFTEVISPLMYKKDLWET 78

Query: 308 SGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGS 367
           SGHWD+Y  +MF V+    + K    + LKPMNCPGH  +F    +S+ ELP+RL+++ S
Sbjct: 79  SGHWDNYAEDMFRVESNSSSNKLEAVYGLKPMNCPGHCVIFGRFARSHHELPIRLSDWSS 138

Query: 368 VYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKL 427
           ++RNEPSG+L GL RVR F QDD H+FC+K Q+  E  K   LI   Y  FGF+K  + L
Sbjct: 139 LHRNEPSGALTGLTRVRRFHQDDGHIFCSKSQVGAEIGKTLQLIRLCYSVFGFQKYRMML 198

Query: 428 STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAI 487
           STRPE  +G+   W++AEN ++  LD          N  +   +GAFYGPK + ++ D  
Sbjct: 199 STRPETHIGTVEEWEEAENELQKALDRHAGPE----NWAIRDKDGAFYGPKIDVLVTDRT 254

Query: 488 GRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           G++ Q  T+Q+DF LP RF   Y   H     P+M+HRAVFGS+ERF+ ++++ ++G  P
Sbjct: 255 GKEHQAATVQLDFQLPQRFQLEYQGEHG-PETPIMVHRAVFGSVERFMALLMDEYEGKWP 313

Query: 548 LWLSPIQAIVTTITSSAVEYAQEIANL------------LKSHHLSIETDFRNETINYKI 595
            WLSP QA++  +  + +EY++ I               L+  +  ++ D R ET+  + 
Sbjct: 314 FWLSPRQAVIIPVNETHLEYSRGIQEKLGGQQDLDVACSLRDVNYYVDVDSRAETVGLRT 373

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           ++   K    II+ GD+E     I +R   +   Q + + +       ++L  D +K
Sbjct: 374 KDAIQKGYNYIILVGDREVQSGKIAVRSRDNRKVQTMDIDEL------QTLFADLEK 424


>gi|73981323|ref|XP_860781.1| PREDICTED: similar to threonyl-tRNA synthetase-like 1 isoform 5
           [Canis familiaris]
          Length = 636

 Score =  354 bits (909), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 137/371 (36%), Positives = 202/371 (54%), Gaps = 19/371 (5%)

Query: 285 RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADD-----------TIKDLRT 333
              +  + E+ TP +    LW+ SGHW+ Y+ +MF ++               T     T
Sbjct: 260 EYTRRGFSEVKTPTLFSAKLWELSGHWEHYQEDMFVLQPPGSDRLASSLSVCSTSHSTDT 319

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
            ALKPMNCP H  +F H  +S+RELP+RLA+FG ++R E SGSL GL R+R F QDDAH+
Sbjct: 320 LALKPMNCPAHCLMFAHRPRSWRELPLRLADFGVLHRAEASGSLGGLTRLRCFQQDDAHI 379

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
           FC  +Q+  E     + + S+Y   GF   +  LSTRP   +G   LWD AE +++  L+
Sbjct: 380 FCAPDQLEEEIQGCLDFLRSVYAVLGFSFRLA-LSTRPSGFLGESCLWDQAEQVLQRALE 438

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS 513
                        +  G+GAFYGPK +  L DA+GR  QCGTIQ+DF LP RF+  Y   
Sbjct: 439 EFGEPWD------LKPGDGAFYGPKIDVHLHDALGRPHQCGTIQLDFQLPLRFDLQYKGQ 492

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIAN 573
                 PV+IHRAV GS+ER +G++ E++ G  PLWLSP Q +V  + +   EYA+E   
Sbjct: 493 AGVLERPVLIHRAVLGSVERMLGVLAESYGGKWPLWLSPFQVVVIPVGAEQEEYAREAQQ 552

Query: 574 LLKSHHLSIETD-FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
            L++  L  + D     T++ ++R   +       + G KE S++++ IR   +    + 
Sbjct: 553 RLQAAGLVCDLDADSGLTLSRRVRRAQLAHYNFQFVVGQKEQSKKTVNIRTRDNRQLGER 612

Query: 633 SLLDAIPILTK 643
            L +A+  L +
Sbjct: 613 DLTEAVQRLLE 623



 Score =  172 bits (435), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 61/194 (31%), Positives = 101/194 (52%), Gaps = 7/194 (3%)

Query: 5   IKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           IK+T P G  +     + T   +A+ +S ++A   VA  +NG++ DL  P+  +  ++ +
Sbjct: 61  IKITLPGGQKVDAVAWNTTPYQLAQQMSSTVADTVVAAQVNGELYDLERPLETDSDLKFL 120

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD--KEQPFSSDELA 120
           T       AV  HS  H++  A + +     +  GP  E GFY+DF   KE+     EL 
Sbjct: 121 TFSSAEGKAVFWHSSTHVLGAAAEQLL-GAVLCRGPSTECGFYHDFFLGKERTVRGSELP 179

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            +E+  QE++A   PF +  +S ++ R+LF+     +K+ ++E        T+Y  G   
Sbjct: 180 ALEQICQELVAAAHPFRRLEVSQDQLRQLFK--DNPFKLRLIEEKVTGPTATVYGCGMLV 237

Query: 181 DLCRGPHVRSTGQV 194
           DLCRGPH+R TGQ+
Sbjct: 238 DLCRGPHLRHTGQI 251


>gi|218515175|ref|ZP_03512015.1| threonyl-tRNA synthetase [Rhizobium etli 8C-3]
          Length = 328

 Score =  354 bits (907), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 202/314 (64%), Positives = 249/314 (79%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIE 60
           M   I LTFPDGS+++FP  ATG DVAESIS+SLAK AVA+AI+G V DLSD V +G IE
Sbjct: 1   MSQAISLTFPDGSVRSFPAGATGKDVAESISKSLAKSAVAIAIDGAVRDLSDAVTDGKIE 60

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           IIT +D R+L +IRH  AH+MAEAVQ +WP  QV IGP+IE+GFYYDF K +PF+ D+L 
Sbjct: 61  IITRKDGRALELIRHDAAHVMAEAVQELWPGTQVTIGPVIENGFYYDFAKNEPFTPDDLP 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IEKKM+EIIAR++PF KQ  S EKA+E+F +K E YKVE++++IP  +++ +Y QG+WF
Sbjct: 121 KIEKKMKEIIARNAPFTKQIWSREKAKEVFAAKGEQYKVELVDAIPEGQDLKIYHQGDWF 180

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+ STGQV   FKLMKVAGAYWRGDSN  MLS IYGTAW  Q +L  YL+ L E
Sbjct: 181 DLCRGPHMASTGQVGTAFKLMKVAGAYWRGDSNNAMLSHIYGTAWADQADLDNYLHMLAE 240

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVL 300
           +EKRDHRKL REMDL H  E+G GV+FWH KGW+IFQTL++YMRR++  DY+E+N PQVL
Sbjct: 241 AEKRDHRKLGREMDLLHFQEEGPGVVFWHGKGWRIFQTLVAYMRRRLAADYQEVNAPQVL 300

Query: 301 DQHLWQQSGHWDSY 314
           D  LW+ SGHW  Y
Sbjct: 301 DTSLWETSGHWGWY 314


>gi|224129118|ref|XP_002320505.1| predicted protein [Populus trichocarpa]
 gi|222861278|gb|EEE98820.1| predicted protein [Populus trichocarpa]
          Length = 322

 Score =  353 bits (906), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 141/320 (44%), Positives = 202/320 (63%), Gaps = 7/320 (2%)

Query: 323 CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMR 382
             D    +   + L+PMNCP H+ ++   L SYR+ P+R+AE G+VYR E SGSLHGL R
Sbjct: 1   MFDQMKIEDEQYQLRPMNCPYHILLYKRKLNSYRDFPIRVAELGTVYRYELSGSLHGLFR 60

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWD 442
           VRGFTQDDAH+FC ++Q+ +E   + +L   I   FGF +  V LSTRPEK VG D +W+
Sbjct: 61  VRGFTQDDAHIFCLEDQIKDEIRGVLDLTEEILLQFGFRRYEVNLSTRPEKSVGDDDIWE 120

Query: 443 DAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNL 502
            A + ++  LD    S Q      +  G GAFYGPK +  ++DA+GR WQC TIQVDFNL
Sbjct: 121 KATSALRDALDDKGWSFQ------IDEGGGAFYGPKIDLKIEDALGRKWQCSTIQVDFNL 174

Query: 503 PSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITS 562
           P RF+  YV+S++EK  P+MIHRAV GS+ERF G++IE++ G+ PLWLSP+Q  +  +T 
Sbjct: 175 PQRFDVTYVDSNTEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPVQVRILPVTD 234

Query: 563 SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           + +EY +E+ + LK + +  E   + E +   IR    +KIP++ + G KEA  +++ IR
Sbjct: 235 TQLEYCKEVISKLKGNGIRAEV-CQGERLPKLIRNAEKQKIPLMAVVGPKEAETQTVTIR 293

Query: 623 RFGSTTTQKVSLLDAIPILT 642
              S     + + D I  + 
Sbjct: 294 SRFSGEVGTIEIDDFISRIK 313


>gi|258578341|ref|XP_002543352.1| threonyl-tRNA synthetase [Uncinocarpus reesii 1704]
 gi|237903618|gb|EEP78019.1| threonyl-tRNA synthetase [Uncinocarpus reesii 1704]
          Length = 653

 Score =  353 bits (905), Expect = 6e-95,   Method: Composition-based stats.
 Identities = 146/439 (33%), Positives = 216/439 (49%), Gaps = 49/439 (11%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
               E          +   DHR +    DLF  +    G   +   G  I   L++++R 
Sbjct: 166 PKPSEPCDRTTPSASTPAPDHRTIGAAQDLFATSLYSPGSPLFQPNGTHILNKLLAFLRA 225

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCA-------DDTIKDLRTFALK 337
           +  +  ++E+ TP +  + LW+ SGHW +Y+ +M+ V+            I +  ++ LK
Sbjct: 226 QYRQYGFQEVLTPTIYKKSLWELSGHWQNYKDDMYEVRGRGATGETTHGEIGEDESYGLK 285

Query: 338 PMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK 397
           PMNCPGH  +F     SYR+LPVR A+F  ++RNE SGSL GL RVR F QDD H+FC  
Sbjct: 286 PMNCPGHCLLFKSQKWSYRDLPVRYADFSPLHRNEVSGSLSGLTRVRRFHQDDGHIFCRP 345

Query: 398 EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE-KRVGSDALWDDAENIMKGVLDTIK 456
           +Q+  E         ++ K FG  +  + LSTRPE   +GS  LWD AE  +K  L+   
Sbjct: 346 QQIGREIQLALKFTDTVMKTFGLGEYKLVLSTRPEKDFIGSLELWDAAEKQLKDALEKSG 405

Query: 457 NSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE 516
                  N  +  G+GAFYGPK ++ L+D+ G+  Q  TIQ+D NLP RF   Y+    E
Sbjct: 406 R------NWEINEGDGAFYGPKIDFQLQDSDGKFHQLSTIQLDMNLPQRFGLEYMVPEGE 459

Query: 517 ---------KCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT--SSAV 565
                    K  PV+IHRA+FGS+ERF  ++IE++ G  P WLSP QAI+ T+      +
Sbjct: 460 EDYNASTDGKGTPVLIHRAIFGSLERFFALLIEHYNGRWPFWLSPRQAIILTVNQDDDVL 519

Query: 566 EYAQEIANLL--------KSHH---------------LSIETDFRNETINYKIREHSIKK 602
           + A E A  +           +                 +  D    ++  KIRE  I K
Sbjct: 520 KAADEAAAKMCGYQRIPFHEANELEAPSQPLSPLQPSFHVTVDKSARSLAKKIREAQIMK 579

Query: 603 IPIIIICGDKEASERSIGI 621
             +I + G K  ++ S+ +
Sbjct: 580 YNLIFVIGPKNLADGSVDV 598


>gi|126172877|ref|YP_001049026.1| tRNA synthetase class II (G H P and S) [Shewanella baltica OS155]
 gi|125996082|gb|ABN60157.1| tRNA synthetase, class II (G, H, P and S) [Shewanella baltica
           OS155]
          Length = 403

 Score =  352 bits (902), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 155/402 (38%), Positives = 235/402 (58%), Gaps = 11/402 (2%)

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
            + HR++A ++DLFH      G+IFWH  GW +F+ +  +MRR  +   +EE+NTP  + 
Sbjct: 1   MKTHREIAEQLDLFHSEPQAPGMIFWHPNGWALFRDIQEHMRRVYRRNGFEEVNTPVFMK 60

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LWQ SGH D +  NMF         +++  + LKPM+CP H+ +F  G+ S+R+LP+R
Sbjct: 61  KELWQTSGHMDMFAENMFF----GGGKENIDEYVLKPMSCPAHILLFKRGVHSHRDLPLR 116

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           L EFG V+RNE SGSL+G +R R FTQDDAHVFC   Q   E          +Y D+G+ 
Sbjct: 117 LFEFGLVHRNESSGSLNGCLRARQFTQDDAHVFCCWSQAEEEIRGFLQRAKQVYGDYGYH 176

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + VK+ST+PEK +GSD  W  A+ ++            +  +     GEGAFYGPK E 
Sbjct: 177 NLDVKISTKPEKSLGSDEQWCRAQKLLDSA------CHIEGFDAEYQAGEGAFYGPKIEL 230

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L D++GR WQCGTIQ DFNLP RF+  Y N   E   PV++H+A++GSIER++GI++E 
Sbjct: 231 SLTDSMGRRWQCGTIQFDFNLPERFDVQYANEQGEFERPVIMHQAMYGSIERWLGILLEV 290

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            +GNLP+WL P+   + ++  S  ++ +++A L  +  + +  D    ++  K++    +
Sbjct: 291 SQGNLPVWLHPVPVAIASVNESNSQFVRQLATLCLARDIRVLVDISQNSVARKMKRFHKQ 350

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           K+P I+  GDKE +E  + ++         V L +    L  
Sbjct: 351 KVPYILTVGDKEEAENRVSVKCRKDGVITHVPLAELADYLAD 392


>gi|153002179|ref|YP_001367860.1| tRNA synthetase class II (G H P and S) [Shewanella baltica OS185]
 gi|151366797|gb|ABS09797.1| tRNA synthetase class II (G H P and S) [Shewanella baltica OS185]
          Length = 398

 Score =  352 bits (902), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 153/402 (38%), Positives = 235/402 (58%), Gaps = 11/402 (2%)

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
            + HR++A ++DLFH      G+IFWH  GW +F+ +  ++RR  +   +EE+NTP  + 
Sbjct: 1   MKTHREIAEQLDLFHSEPQAPGMIFWHPNGWALFRDIQEHIRRVYRRNGFEEVNTPVFMK 60

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LWQ SGH D +  NMF         +++  + LKPM+CP H+ +F  G+ S+R+LP+R
Sbjct: 61  KELWQTSGHMDMFAENMFF----GGGKENIDEYVLKPMSCPAHILLFKRGVHSHRDLPLR 116

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           L EFG V+RNE SGSL+G +R R FTQDDAHVFC   Q   E          +Y D+G+ 
Sbjct: 117 LFEFGLVHRNESSGSLNGCLRARQFTQDDAHVFCCWSQAEEEIRGFLQRAKQVYGDYGYH 176

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + VK+ST+PEK +GSD  W  A+ ++            +  +     GEGAFYGPK E 
Sbjct: 177 NLDVKISTKPEKALGSDEQWRRAQKLLDSA------CYSEGFDAEYQAGEGAFYGPKIEL 230

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L D++GR WQCGTIQ DFNLP RF+  Y N   E   PV++H+A++GSIER++GI++E 
Sbjct: 231 SLTDSMGRCWQCGTIQFDFNLPERFDVQYTNEQGEFERPVIMHQAMYGSIERWLGILLEV 290

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            +GNLP WL P+   + ++  S  ++ +++A L  +  + +  D    ++  K++    +
Sbjct: 291 SQGNLPDWLHPVPVAIASVNESNSQFVRQLATLCLARDMRVLVDISQNSVARKMKRFHKQ 350

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           K+P I+  GDKE +E+ + ++         + L +    L  
Sbjct: 351 KVPYILTVGDKEEAEKCVSVKCRKDGVMTHIPLAELADYLAD 392


>gi|255714212|ref|XP_002553388.1| KLTH0D15620p [Lachancea thermotolerans]
 gi|238934768|emb|CAR22950.1| KLTH0D15620p [Lachancea thermotolerans]
          Length = 453

 Score =  351 bits (900), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 144/422 (34%), Positives = 228/422 (54%), Gaps = 34/422 (8%)

Query: 247 RKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEINTPQVLDQHL 304
             ++ +  LF       G +F+   G KIF  L+++M+ + ++   ++E+ TP +  + L
Sbjct: 35  HDVSAKQQLFMTDPVSPGSVFFLPNGTKIFNKLVNFMKLQQQNKFGFQEVITPLIYRKSL 94

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W+QSGHW++Y+ +MF V+  D        + LKPMNCPGH  VF    +SY ELP+R ++
Sbjct: 95  WEQSGHWENYKEDMFRVEGQD---LQKEEYGLKPMNCPGHCMVFKRFARSYNELPLRYSD 151

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF---NECLKIHNLIISIYKDFGF- 420
           F  ++RNE SG+L GL RVR F QDD H+FC  EQ+     +C+K+ +L  +     G  
Sbjct: 152 FSPLHRNEASGALSGLTRVRKFHQDDGHIFCIPEQVESEITKCIKMLDLCYTKVFPLGRG 211

Query: 421 ---EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
                  ++LSTRPE  VG  ++W+ AE I++G+L+             +  G+GAFYGP
Sbjct: 212 NTPTDYELRLSTRPEHYVGDVSVWNHAEAILEGILNKSGKVW------SINAGDGAFYGP 265

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K + +L D   +  Q  TIQ+DF LP RF+  Y +  +    P+MIHRAVFGS+ERF+ +
Sbjct: 266 KIDVLLADHNNKQHQVATIQLDFQLPERFDLKYKDKDNTFKRPIMIHRAVFGSVERFMAM 325

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSA---VEYAQEIANLLK-------------SHHLS 581
           +I++ +G  P WL+P Q ++  + +     V  A ++A  L+             S H +
Sbjct: 326 LIDSNEGKWPFWLNPHQCMIVPLNTKNEALVHKANDLARALRGEDTPADEPVKLNSFHFN 385

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           ++ D R E   Y+I+E   K    +I+ G KE       IR   S   + ++L + I   
Sbjct: 386 VDIDDRAEPTGYRIKEAIEKNYSFLIMVGTKEIESGKYAIRTRESRDLEHLTLDEIIQKF 445

Query: 642 TK 643
           + 
Sbjct: 446 SN 447


>gi|160876899|ref|YP_001556215.1| tRNA synthetase class II [Shewanella baltica OS195]
 gi|160862421|gb|ABX50955.1| tRNA synthetase class II (G H P and S) [Shewanella baltica OS195]
 gi|315269103|gb|ADT95956.1| tRNA synthetase class II (G H P and S) [Shewanella baltica OS678]
          Length = 398

 Score =  351 bits (900), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 154/402 (38%), Positives = 235/402 (58%), Gaps = 11/402 (2%)

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
            + HR++A ++DLFH      G+IFWH  GW +F+ +  +MRR  +   +EE+NTP  + 
Sbjct: 1   MKTHREIAEQLDLFHSEPQAPGMIFWHPNGWALFRDIQEHMRRVYRRNGFEEVNTPVFMK 60

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LWQ SGH D +  NMF         +++  + LKPM+CP H+ +F  G+ S+R+LP+R
Sbjct: 61  KELWQTSGHMDMFAENMFF----GGGKENMGEYVLKPMSCPAHILLFKRGVHSHRDLPLR 116

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           L EFG V+RNE SGSL+G +R R FTQDDAHVFC   Q   E          +Y D+G+ 
Sbjct: 117 LFEFGLVHRNESSGSLNGCLRARQFTQDDAHVFCCWSQAEEEICGFLQRAKQVYGDYGYH 176

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + VK+ST+PEK +GSD  W  A+ ++            +  +     GEGAFYGPK E 
Sbjct: 177 NLDVKISTKPEKALGSDEQWCRAQKLLDSACQI------EGFDAEYQAGEGAFYGPKIEL 230

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L D++GR WQCGTIQ DFNLP RF+  Y N   E   PV++H+A++GSIER++GI++E 
Sbjct: 231 SLTDSMGRRWQCGTIQFDFNLPERFDVQYTNEQGEFERPVIMHQAMYGSIERWLGILLEV 290

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            +GNLP WL P+   + ++  S  ++ +++A L  +  + +  D    ++  K++    +
Sbjct: 291 SQGNLPDWLHPVPVAIASVNESNSQFVRQLAALCLARDMRVLVDISQNSVARKMKRFHKQ 350

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           K+P I+  GDKE +E+ + ++         + L +    L  
Sbjct: 351 KVPYILTVGDKEEAEKCVSVKCRKDGVMTHIPLAELADYLAD 392


>gi|296228693|ref|XP_002759920.1| PREDICTED: threonyl-tRNA synthetase, mitochondrial isoform 2
           [Callithrix jacchus]
          Length = 588

 Score =  351 bits (900), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 143/392 (36%), Positives = 214/392 (54%), Gaps = 22/392 (5%)

Query: 276 FQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCA---------- 324
              L    + +  +  + E+ TP +    LW+QSGHW+ Y+ +MFAV+            
Sbjct: 202 RDQLHRLFKAEYARRGFFEVKTPTLFSTKLWEQSGHWEHYQEDMFAVQPPGSDRPASSQS 261

Query: 325 DDTIKDLRT-FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRV 383
           D + +      ALKPMNCP H  +F H  +S+RELP+RLA+FG+++R E SG L GL R+
Sbjct: 262 DHSTRHTTDTLALKPMNCPAHCLMFAHRPRSWRELPLRLADFGALHRAEASGGLCGLTRL 321

Query: 384 RGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDD 443
           R F QDDAH+FCT +Q+  E     + + S+Y   GF   +  LSTRP   +G   LWD 
Sbjct: 322 RCFQQDDAHIFCTTDQLEAEIQSCLDFLRSVYAVLGFSFRLA-LSTRPSGFLGDPCLWDQ 380

Query: 444 AENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLP 503
           AE +++  L              +  G+GAFYGPK +  L DA+GR  QCGTIQ+DF LP
Sbjct: 381 AEQVLQQALKEFGEPWD------LNSGDGAFYGPKIDVHLHDALGRPHQCGTIQLDFQLP 434

Query: 504 SRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSS 563
            RF+  Y         PV+IHRAV GS+ER +G++ E+ +G  PLWLSP Q +V  + + 
Sbjct: 435 LRFDLQYKGQAGALERPVLIHRAVLGSVERLLGVLAESCRGKWPLWLSPFQVVVIPVGTE 494

Query: 564 AVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
             EYA+E    L++  L  + D  +  T++ +IR   +       + G KE S+ ++ IR
Sbjct: 495 QEEYARETQQSLQAAGLVCDLDADSRLTLSRRIRRAQLAHYNFQFVVGQKEQSKSTVNIR 554

Query: 623 RFGSTTTQKVSLLDAIPILT--KESLPPDCQK 652
              +    + SL +A+  L   + +  P+ ++
Sbjct: 555 TRDNRLLGEWSLPEAVQRLVVLQNTRVPNAEE 586



 Score =  144 bits (362), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 5/155 (3%)

Query: 2   PSDIKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           P  IK++ P G  +     + T   +A  IS +LA  AVA  +NG++ DL  P+  +  +
Sbjct: 58  PRTIKISLPGGQKVDAVAWNTTPYQLARQISSTLADTAVAAQVNGELYDLERPLETDSDL 117

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD--KEQPFSSD 117
             +T + P   AV  HS  H++  A +  +    +  GP  E+GFY+DF   KE+     
Sbjct: 118 RFLTFDSPEGKAVFWHSSTHVLGAAAEQ-FLGAVLCRGPSTENGFYHDFFLGKERTIRGS 176

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFES 152
           EL  +E+  QE+ A   PF +   S ++   LF++
Sbjct: 177 ELPVLERICQELTAAAQPFRRLEASRDQLHRLFKA 211


>gi|297201097|ref|ZP_06918494.1| threonyl-tRNA synthetase [Streptomyces sviceus ATCC 29083]
 gi|197712117|gb|EDY56151.1| threonyl-tRNA synthetase [Streptomyces sviceus ATCC 29083]
          Length = 413

 Score =  351 bits (899), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 125/408 (30%), Positives = 190/408 (46%), Gaps = 16/408 (3%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTP 297
                DHR+L RE+DLF        G+ +W   G  +   L  Y+R  +    Y  + +P
Sbjct: 1   MKPMHDHRRLGRELDLFDTDPLMGAGLPYWLPDGAVVRHVLEEYVRETERAAGYRHVYSP 60

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +  + L++ SGHWD Y  +MF          +     L+P  CP H  ++     SYRE
Sbjct: 61  VLGKRELYEISGHWDHYSDDMFPPMRLGGGEGEGEEVVLRPSLCPHHALIYRSRSHSYRE 120

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R AE G +YR+E SG L GL RVR    +DAH+FCT EQ   E      LI   Y D
Sbjct: 121 LPLRFAELGGMYRSELSGVLGGLTRVRSIQLNDAHIFCTPEQAVAEARAALALIRRAYDD 180

Query: 418 FGFEKIMVKLS---TRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            G      +LS       K V    LW  A  +++ VLD         I    + GE AF
Sbjct: 181 LGIRAARYRLSLPGDGDGKFVPDPELWRRATALLEEVLD--------GIEYESVEGEAAF 232

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           YGPK +  + D  GR+    T+Q+DF+ P RF+  Y+     K  PVM+HR++ GS+ER 
Sbjct: 233 YGPKIDVQISDPAGRESTLSTVQIDFHQPERFDLHYIGRDGRKHRPVMVHRSIIGSVERA 292

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRN-ETINY 593
           +  +IE   G  P+WL+P+Q ++  +     E A ++    ++  +  E       T+  
Sbjct: 293 VAHLIEAHGGAFPVWLAPVQLVILPVAEEQEERAHDLVRRAEARGIRAELSGPGHGTLGA 352

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           ++R   +  +P   + G +EA      +R         V + + +  +
Sbjct: 353 RVRAARL--VPYQAVIGQREADAGCAAVRLRDGRRPGAVPVDELLERI 398


>gi|54023348|ref|YP_117590.1| putative threonyl-tRNA synthetase [Nocardia farcinica IFM 10152]
 gi|54014856|dbj|BAD56226.1| putative threonyl-tRNA synthetase [Nocardia farcinica IFM 10152]
          Length = 419

 Score =  350 bits (898), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 120/407 (29%), Positives = 202/407 (49%), Gaps = 18/407 (4%)

Query: 240 ESEKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTP 297
                DHRKL RE+DLF      GSG+ +W   G  +   L  Y+R  + +  Y  +++P
Sbjct: 15  RRPMYDHRKLGRELDLFDTDPLIGSGLPYWLPSGGALRHALEEYIRTAEHRAGYRHVHSP 74

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +  + L++ SGHW  YR +M+                L+P  CP H  ++     SYRE
Sbjct: 75  VLGKRELYEISGHWAHYREDMYPPMDVG-----GEQVVLRPSLCPHHALIYRSRSHSYRE 129

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AE G++YR E SG L GL RVR    +DAH+FCT++Q+  E      +I   +  
Sbjct: 130 LPLRIAELGAMYRAELSGVLGGLSRVRAIHLNDAHIFCTEDQVGAEVHAALAMIARAHAA 189

Query: 418 FGFEKIMVKLSTRPE--KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
            G      +LS      K V + A+W+ A  ++   L          I+      E AFY
Sbjct: 190 LGIAPHRFRLSLPGPGGKYVPNPAMWERATGVLVEALRAAG------IDYEPADDEAAFY 243

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +    D+ GR++   T+QVDF+ P +F+  Y+ +   K  PVM+HR++ GS+ER +
Sbjct: 244 GPKIDVQFLDSAGREFTLSTVQVDFHQPEQFDLCYIGADGAKHRPVMVHRSIIGSVERAV 303

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRN-ETINYK 594
             ++E   G  P+WL+P Q +V  +       A+++  +L++  +  E    +  ++  +
Sbjct: 304 AHLVEVHGGAFPVWLAPTQVVVLPLAGEQHAAAEDVVRVLRAADVRAELAGHDQGSLGAR 363

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           IR    +++P  ++ G KE +  ++ +R         + + D +  +
Sbjct: 364 IRAG--RQVPYQVVVGPKEVAAGTLAVRLRSGEQLAPLPVSDFLARV 408


>gi|149244270|ref|XP_001526678.1| threonyl-tRNA synthetase, mitochondrial precursor [Lodderomyces
           elongisporus NRRL YB-4239]
 gi|146449072|gb|EDK43328.1| threonyl-tRNA synthetase, mitochondrial precursor [Lodderomyces
           elongisporus NRRL YB-4239]
          Length = 486

 Score =  350 bits (897), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 149/463 (32%), Positives = 228/463 (49%), Gaps = 50/463 (10%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-R 285
           + +           S    + +++ +  L+       G IF+   G +I   LI +M+ +
Sbjct: 22  SNKAPNVSKTTKASSSTNTNHEISTKQLLYTTDITSPGSIFFLPHGTRILNKLIQFMKNQ 81

Query: 286 KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD-------------------- 325
           +IK  + E+ TP +    LW++SGHWD+Y+ +MF V   D                    
Sbjct: 82  QIKYGFHEVVTPLIFKTKLWKKSGHWDNYKDDMFKVVGNDKSKEEVVVVLAPTVQSESLT 141

Query: 326 ---------DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
                    +  ++   + LKPMNCPGH  +F+   +SY ELP+R ++F S++RNE SG+
Sbjct: 142 DDGNDSALQEAFEEEHEYGLKPMNCPGHCMIFSKFERSYNELPIRYSDFSSLHRNEASGA 201

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP-EKRV 435
           L GL RVR F QDD H+FC    +  E     NLI   Y  FG +KI   LSTRP EK +
Sbjct: 202 LSGLTRVRRFHQDDGHIFCDMSHIDQEIANTLNLIKDTYSIFGIDKIEYYLSTRPEEKYI 261

Query: 436 GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGT 495
           G    WD AE  +K VLD          N  V  G+GAFYGPK + +L DA G+  Q  T
Sbjct: 262 GEIETWDAAELKLKQVLDRSAGKG----NWQVREGDGAFYGPKIDVLLTDAFGKKHQVAT 317

Query: 496 IQVDFNLPSRFNAFYVNSHSEK-CHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQ 554
           IQ+DF LP RF+  Y++    +   P++IHRAVFGS+ERF  I++++++G  P W++P Q
Sbjct: 318 IQLDFQLPKRFDLKYISEDGSRNNQPILIHRAVFGSLERFFAILLDHYQGKWPFWINPRQ 377

Query: 555 AIVTTITSSAVEYAQEIANL--------------LKSHHLSIETDFRNETINYKIREHSI 600
           AI+  +  +    A+E+                 L  ++  ++ D R  TI  + ++   
Sbjct: 378 AIIIPVNETHTARAEELQRKLCGDIINTNDPVSPLTGYNFHVDVDKRPATIGMRTKDAIQ 437

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           K    +II GDK+ +  +  +R     T   ++  D       
Sbjct: 438 KGYSYLIIIGDKDIANGTYAVRSRDDRTIYNLTGEDIYKKFID 480


>gi|304410724|ref|ZP_07392342.1| tRNA synthetase class II (G H P and S) [Shewanella baltica OS183]
 gi|307304819|ref|ZP_07584569.1| tRNA synthetase class II (G H P and S) [Shewanella baltica BA175]
 gi|304351208|gb|EFM15608.1| tRNA synthetase class II (G H P and S) [Shewanella baltica OS183]
 gi|306912221|gb|EFN42645.1| tRNA synthetase class II (G H P and S) [Shewanella baltica BA175]
          Length = 403

 Score =  350 bits (897), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 155/402 (38%), Positives = 235/402 (58%), Gaps = 11/402 (2%)

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
            + HR++A ++DLFH      G+IFWH  GW +F+ +  +MRR  +   +EE+NTP  + 
Sbjct: 1   MKTHREIAEQLDLFHSEPQAPGMIFWHPNGWALFRDIQEHMRRVYRRNGFEEVNTPVFMK 60

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LWQ SGH D +  NMF         +++  + LKPM+CP H+ +F  G+ S+R+LP+R
Sbjct: 61  KELWQTSGHMDMFAENMFF----GGGKENIDEYVLKPMSCPAHILLFKRGVHSHRDLPLR 116

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           L EFG V+RNE SGSL+G +R R FTQDDAHVFC   Q   E          +Y D+G+ 
Sbjct: 117 LFEFGLVHRNESSGSLNGCLRARQFTQDDAHVFCCWSQAEEEIRGFLQRAKQVYGDYGYH 176

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + VK+ST+PEK +GSD  W  A+ ++            +  +     GEGAFYGPK E 
Sbjct: 177 NLDVKISTKPEKALGSDEQWCRAQKLLDSACQI------EGFDAEYQAGEGAFYGPKIEL 230

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L D++GR WQCGTIQ DFNLP RF+  Y N   E   PV++H+A++GSIER++GI++E 
Sbjct: 231 SLTDSMGRRWQCGTIQFDFNLPERFDVQYANEQGEFERPVIMHQAMYGSIERWLGILLEV 290

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            +GNLP WL P+   + ++  S  ++ +++A L  +  + +  D    ++  K++    +
Sbjct: 291 SQGNLPDWLHPVPVAIASVNESNSQFVRQLAALCLARDMRVLVDISQNSVARKMKRFHKQ 350

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           K+P I+  GDKE +E+ + ++         V L +    L  
Sbjct: 351 KVPYILTVGDKEEAEKCVSVKCRKDGVITHVPLSELCDYLAD 392


>gi|284031321|ref|YP_003381252.1| threonyl-tRNA synthetase [Kribbella flavida DSM 17836]
 gi|283810614|gb|ADB32453.1| threonyl-tRNA synthetase [Kribbella flavida DSM 17836]
          Length = 417

 Score =  349 bits (896), Expect = 7e-94,   Method: Composition-based stats.
 Identities = 135/422 (31%), Positives = 203/422 (48%), Gaps = 25/422 (5%)

Query: 243 KRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
             DHRKL RE+ LF      G+G+ +    G  I Q L SY+   + +  Y+ + +P + 
Sbjct: 1   MYDHRKLGRELGLFDSDPLIGAGLPYLLPAGAAIRQALESYVAELERRSGYQHVYSPVLG 60

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            + L++ SGHW  Y  +M+      +         L+P  CP H  ++     SYRELPV
Sbjct: 61  KRELYELSGHWSHYSDDMYPPMKVGE-----EEVVLRPSLCPHHALIYRSRAHSYRELPV 115

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R AE G +YR+E SG L GL RVR    +D H+FCT +Q+ +E     +LI+  Y D G 
Sbjct: 116 RYAELGGMYRSELSGVLGGLTRVRAIQLNDGHIFCTLDQVADEARAALDLILRAYGDLGL 175

Query: 421 EKIMV---------KLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
                         ++     K VG    WD +  +++ VLD         +      GE
Sbjct: 176 RPARFLLSLPAADARIGDPASKYVGDAESWDRSAALLREVLDEAG------VQYEEAPGE 229

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
            AFYGPK +  + DA GR+    TIQ+DF+ P+RF   Y+ +   K  PVM+HRA+ GS+
Sbjct: 230 AAFYGPKIDVQIADAAGRESTLSTIQIDFHQPARFELDYIGADGNKHRPVMVHRAIIGSL 289

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE-T 590
           ER I  +IE   G LP WL+P+Q +V  I+ +  +YA EI        L  E    +E T
Sbjct: 290 ERVIAQLIELHGGALPGWLAPVQLVVLPISDAEEKYAAEITRRAVDRGLRAELAHADEGT 349

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDC 650
           +  +IRE+ +  +P   + G +E     + +R    +     +  D +  L     P   
Sbjct: 350 LGARIRENRL--VPYQAVIGARELEAGQLAVRDRSGSRYAPAAAGDVLDQLAAGCRPAAL 407

Query: 651 QK 652
            +
Sbjct: 408 SE 409


>gi|255957075|ref|XP_002569290.1| Pc21g23230 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211591001|emb|CAP97220.1| Pc21g23230 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 515

 Score =  349 bits (896), Expect = 7e-94,   Method: Composition-based stats.
 Identities = 152/486 (31%), Positives = 229/486 (47%), Gaps = 56/486 (11%)

Query: 206 AYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGV 265
            +    S +   + I   + + + E              DHR L    +LF  +    G 
Sbjct: 19  PWQFTRSRQLSYTAIRHCSCSDKPEAPTIP-------PTDHRALGTAQELFTSSVYSPGS 71

Query: 266 IFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCA 324
             +   G  +   LIS++R +  +  + E+ TP +  + LW+ SGHW +Y+ +M+ V   
Sbjct: 72  PLFLPNGTHVVNKLISFLRTQYLQYGFREVLTPTIYKKSLWEISGHWQNYKDDMYEVTGR 131

Query: 325 ------DDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLH 378
                 D  + +  ++ LKPMNCPGH  +F     SYR++PVR A+F  ++RNE SGSL 
Sbjct: 132 GASGEADGEVGEDESYGLKPMNCPGHCLLFKSQNHSYRDMPVRYADFSPLHRNEVSGSLT 191

Query: 379 GLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE-KRVGS 437
           GL RVR F QDD H+FC ++Q+ +E       +    K FG     + LSTRPE   +G+
Sbjct: 192 GLTRVRRFHQDDGHIFCRRQQIKSEIASALGFVDMAMKTFGLGPYRLVLSTRPETDYIGT 251

Query: 438 DALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ 497
             +WD+AE  ++  LD+            +  G+GAFYGPK +  L+D  G+  Q  TIQ
Sbjct: 252 LEMWDNAEMQLREALDSTGR------EWALNEGDGAFYGPKIDIQLQDQAGKYHQLSTIQ 305

Query: 498 VDFNLPSRFNAFYVNSHSEKCH---------PVMIHRAVFGSIERFIGIMIENFKGNLPL 548
           +D NLP RF   Y  + SE  +         PVMIHRA+FGS+ERF+ ++IE   G+ P 
Sbjct: 306 LDMNLPQRFGLEYQVAESEPDYNPATPGVATPVMIHRAIFGSLERFLALLIEQHGGHWPF 365

Query: 549 WLSPIQAIVTTIT--SSAVEYAQEIANLLKSHHLS----------------------IET 584
           WLSP QAIV T+    + V  AQE A                               ++ 
Sbjct: 366 WLSPRQAIVLTVNQDDAVVRQAQEAAAKF--AGFRALLNDGTAEPPRPLSSVDSTFLVDV 423

Query: 585 DFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           D   +T+  KI+     K  +I I G ++ ++  I +   G   ++       +  L K 
Sbjct: 424 DTSAQTLGKKIQRAKQMKYNLIFILGSRDLADGGITVDVTGQMQSKTDKDAQTLQALIKA 483

Query: 645 SLPPDC 650
            L  D 
Sbjct: 484 RLGSDA 489


>gi|224084293|ref|XP_002191292.1| PREDICTED: hypothetical protein [Taeniopygia guttata]
          Length = 447

 Score =  349 bits (896), Expect = 8e-94,   Method: Composition-based stats.
 Identities = 141/442 (31%), Positives = 224/442 (50%), Gaps = 51/442 (11%)

Query: 215 PMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWK 274
             L R+   A+ + QEL Q+    +E+ +RDHR++ ++ +LF   +   G  F+  +G  
Sbjct: 51  QSLQRVAAVAFPSAQELEQWQRAQDEAAQRDHRRIGKDQELFFFHKFSPGSCFFLPRGAH 110

Query: 275 IFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           ++ TL+ ++R + +   + E+ TP +    LW+ SGHW  Y  ++F+V            
Sbjct: 111 VYNTLVEFIRSEYRARGFSEVVTPNLFSPRLWELSGHWQHYSPHIFSV------PAAPEP 164

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
            +LKPMNCP H  +F H  +S+RELP+RLA+FG ++RNEP G+L GL RVR F QDDAH+
Sbjct: 165 LSLKPMNCPAHCLMFAHRPRSWRELPLRLADFGVLHRNEPPGTLTGLTRVRRFQQDDAHI 224

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
           FCT EQ+ +E     + I ++Y   GF   +  L+TRP+  +G    WD AE  ++  L 
Sbjct: 225 FCTLEQVSSEIDSSLDFIRTVYAVLGFSFRLA-LATRPDGFLGDPETWDRAEQQLERSLQ 283

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS 513
                 +      +  G+GAFYGPK +  ++DA+GR  QCGTIQ+DF +P RF   Y   
Sbjct: 284 NFGQPWE------LSPGDGAFYGPKIDIRIRDALGRHHQCGTIQLDFQMPERFELEYAR- 336

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIAN 573
                                            PLWLSP+QA+V   T    +YA+E+  
Sbjct: 337 ---------------------------------PLWLSPLQAMVIPQTPEVEDYAREVQA 363

Query: 574 LLKSHHLSIETD-FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
           +L+   L  + D     T+  KIR   +      ++ G +E    ++ +R   +    ++
Sbjct: 364 VLRRGGLLADLDGDPGTTLARKIRRAQLTHYNFQLVVGRREREHGTVSVRTRENRQLGEL 423

Query: 633 SLLDAIPILTK--ESLPPDCQK 652
            L   +  L +  +S  PD ++
Sbjct: 424 ELPRVLRRLQELRDSRVPDAEQ 445



 Score = 50.2 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 1/41 (2%)

Query: 32 RSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLA 71
            LAK A+   +NG + DL  P+  +  +E++    P    
Sbjct: 5  AGLAKVALVARVNGTLQDLDRPLECDTDLELLDFSTPEGRE 45


>gi|50286281|ref|XP_445569.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49524874|emb|CAG58480.1| unnamed protein product [Candida glabrata]
          Length = 462

 Score =  349 bits (895), Expect = 9e-94,   Method: Composition-based stats.
 Identities = 142/426 (33%), Positives = 221/426 (51%), Gaps = 38/426 (8%)

Query: 247 RKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYM--RRKIKDDYEEINTPQVLDQHL 304
           ++++    LF   +   G  F+   G KI+  L+S+M  ++K    ++E+ TP +  + L
Sbjct: 40  QEVSNRQRLFITDQITPGSAFFLPNGTKIYNKLVSFMKTQQKHLFGFKEVITPLIYRKSL 99

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W+QSGHW++Y+ +MF V+  D T      + LKPMNCPGH  +FN    SY +LP+R ++
Sbjct: 100 WEQSGHWENYKEDMFRVEGNDLT---KEEYGLKPMNCPGHCVIFNRFDHSYNDLPIRYSD 156

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG----- 419
           F  ++RNE SG+L GL RVR F QDD H+FCT +Q+  E L    L+   Y         
Sbjct: 157 FSPLHRNEASGALSGLTRVRMFHQDDGHIFCTPDQVEVEILNCLKLVDMCYTKVFPISGE 216

Query: 420 ----FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                +   + LSTRPE  +G    WD AE +++ VL+      +      +  G+GAFY
Sbjct: 217 QSKSKDSYEIHLSTRPEHYIGELESWDHAEEVLRSVLEKSSKPWK------LNAGDGAFY 270

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK + ++KD  G+  Q  TIQ+DF LP RFN  Y +  +    P+MIHRAV GS+ERF+
Sbjct: 271 GPKLDIMVKDHHGKQHQVATIQLDFQLPQRFNLRYKDRDNSYKRPIMIHRAVLGSVERFM 330

Query: 536 GIMIENFKGNLPLWLSPIQAIVTT---ITSSAVEYAQEIANLLKSH-------------- 578
            +++E+  G  P WL+P QAIV          V+ A+++ + L+                
Sbjct: 331 AMLVESNGGKWPFWLNPNQAIVIPLNTNNEEQVKMAKQLHDKLRGKLEIEDNLKPVPISH 390

Query: 579 -HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
              + + D R E + Y+I++   K    +II GD E   +   +R   + T   +   + 
Sbjct: 391 VSYNADIDIRAEPVGYRIKDAITKNYSYLIIVGDNEVKAQKFSVRTRENRTPVLMDTNEI 450

Query: 638 IPILTK 643
           +     
Sbjct: 451 LEKFKD 456


>gi|217974767|ref|YP_002359518.1| tRNA synthetase class II [Shewanella baltica OS223]
 gi|217499902|gb|ACK48095.1| tRNA synthetase class II (G H P and S) [Shewanella baltica OS223]
          Length = 398

 Score =  349 bits (895), Expect = 9e-94,   Method: Composition-based stats.
 Identities = 154/402 (38%), Positives = 235/402 (58%), Gaps = 11/402 (2%)

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
            + HR++A ++DLFH      G+IFWH  GW +F+ +  +MRR  +   +EE+NTP  + 
Sbjct: 1   MKTHREIAEQLDLFHSEPQAPGMIFWHPNGWVLFRDIQEHMRRVYRRNGFEEVNTPVFMK 60

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LWQ SGH D +  NMF         +++  + LKPM+CP H+ +F  G+ S+R+LP+R
Sbjct: 61  KELWQTSGHMDMFAENMFF----GGGKENMDEYVLKPMSCPAHILLFKRGVHSHRDLPLR 116

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           L EFG V+RNE SGSL+G +R R FTQDDAHVFC   Q   E          +Y D+G+ 
Sbjct: 117 LFEFGLVHRNESSGSLNGCLRARQFTQDDAHVFCCWSQAEEEIRGFLQRAKQVYGDYGYH 176

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + VK+ST+PEK +GSD  W  A+ ++            +  +     GEGAFYGPK E 
Sbjct: 177 NLDVKISTKPEKALGSDEQWCRAQKLLDSACQI------EGFDAEYQAGEGAFYGPKIEL 230

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L D++GR WQCGTIQ DFNLP RF+  Y N   E   PV++H+A++GSIER++GI++E 
Sbjct: 231 SLTDSMGRRWQCGTIQFDFNLPERFDVHYTNEQGEFERPVIMHQAMYGSIERWLGILLEV 290

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            +GNLP WL P+   + ++  S  ++ +++A L  +  + +  D    ++  K++    +
Sbjct: 291 SQGNLPDWLHPVPVAIASVNESNSQFVRQLATLCLARDMRVLVDISQNSVARKMKRFHKQ 350

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           K+P I+  GDKE +E+ + ++         + L +    L  
Sbjct: 351 KVPYILTVGDKEEAEKCVSVKCRKDGVMTHIPLAELANYLAD 392


>gi|169621989|ref|XP_001804404.1| hypothetical protein SNOG_14207 [Phaeosphaeria nodorum SN15]
 gi|111057324|gb|EAT78444.1| hypothetical protein SNOG_14207 [Phaeosphaeria nodorum SN15]
          Length = 542

 Score =  349 bits (895), Expect = 9e-94,   Method: Composition-based stats.
 Identities = 149/461 (32%), Positives = 231/461 (50%), Gaps = 55/461 (11%)

Query: 211 DSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHR 270
            + R +   +  ++                +   DHR LA+  +LF  +    G      
Sbjct: 38  SAPRQLQHTVTVSSEAPADAQLNPTTADPPTPPTDHRTLAQVHNLFITSPFSPGSPLILP 97

Query: 271 KGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT-- 327
            G  +FQ L S++R +     ++E+ TP +  + LW++SGHW++Y  +MF+V+    T  
Sbjct: 98  NGAYVFQKLQSFLRAQYPQFGFQEVITPIIYKKSLWEKSGHWENYAEDMFSVQGRGATGQ 157

Query: 328 -----IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMR 382
                + +   F LKPMNCPGH  +F   +KSYR+LP+R A+F +++RNE SGSL GL R
Sbjct: 158 TEKAQVGEDEEFGLKPMNCPGHCLLFRDEIKSYRDLPIRYADFSALHRNEVSGSLTGLTR 217

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALW 441
           VR F QDDAH+FC  +Q+  E  +    +  +Y  FG     + LSTRP+   +G+   W
Sbjct: 218 VRRFHQDDAHIFCRPDQILPEIEQTLKFVGMVYNTFGLGPYKLLLSTRPKDSFIGTIEEW 277

Query: 442 DDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFN 501
           D AE  +   LD+I +         +  G+GAFYGPK + ILKD+ G++ Q  TIQ+DF 
Sbjct: 278 DRAEKQLSTALDSIGS------EWAINEGDGAFYGPKIDIILKDSNGKEHQTATIQLDFQ 331

Query: 502 LPSRFNAFYVNS----------------HSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           LP RF+  Y  S                      PVMIHRA++GSIERF+ ++IE++ G 
Sbjct: 332 LPQRFDLQYQASPEELEAGTQTTMDTGLDPSLRRPVMIHRAIYGSIERFMALLIEHYAGK 391

Query: 546 LPLWLSPIQAIVTTITSS-----AVEYAQEIANLLKSHHLS------------------- 581
            P WLSP  A + ++ S       +E  + + + L+ H                      
Sbjct: 392 YPFWLSPRPATILSLNSDANVQAHIERVKAVLSGLQPHDAPSTASSSSPKPLPLSTIHLP 451

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           I+ D  + ++  K+ E   KK   +I+ G KEA   ++ ++
Sbjct: 452 IDVDISDRSLGKKVAEARSKKYNHMIVVGGKEAENDAVNLK 492


>gi|302865324|ref|YP_003833961.1| threonyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029]
 gi|302568183|gb|ADL44385.1| threonyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029]
          Length = 404

 Score =  348 bits (892), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 126/403 (31%), Positives = 209/403 (51%), Gaps = 17/403 (4%)

Query: 243 KRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
             DHR+L R+++LF        G+  W   G      +  Y+R  + +  Y+ + +P + 
Sbjct: 1   MIDHRRLGRDLELFVSDPLAGAGLPIWLPAGAAARHAVEEYVRELERRAGYQHVYSPPLG 60

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            + L++ SGH   +  +MF        +     F L+P  CP H  VF    +SYRELP+
Sbjct: 61  KRELFELSGHLGYFADDMFPPM----RLSADDEFVLRPALCPHHALVFRARGRSYRELPL 116

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G +YR E SG L GL RVR  + +DAH FC  EQ+ +E  +I  LI   +   G 
Sbjct: 117 RVAELGGMYRAERSGVLGGLSRVRAISLNDAHNFCALEQVGDEVREILRLIGEAHAALGV 176

Query: 421 EKIMVKLSTR--PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
               ++LS R   ++ VG DA W  AE +++  LD         ++     GE AFYGPK
Sbjct: 177 RPAGLRLSLRGPDQRYVGDDAGWARAEELLRAALD--------GVDVVEAPGEAAFYGPK 228

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +  + DA GR+    T+Q+DF+ P RF+  Y +S   +  PVM+HR++ GS+ER    +
Sbjct: 229 IDIQIVDAAGRESTISTVQLDFDKPERFDLSYTDSDGRRKRPVMVHRSLVGSMERLFAYL 288

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE  +G  P W +P+Q ++  + ++ V+ A  +A   ++  L  E D    ++  +IR+ 
Sbjct: 289 IEVHEGAFPAWYAPVQLLLLPVDAAQVDAAVGLARRAEAAGLRAEVDHAG-SLGARIRDA 347

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           S +++P   + G +EA++ S+ +R         +   +A+ ++
Sbjct: 348 SRRRVPYTGVLGPREAADGSVSLRLRDGRVLAPMPAAEALGLI 390


>gi|19114946|ref|NP_594034.1| mitochondrial threonine-tRNA ligase [Schizosaccharomyces pombe
           972h-]
 gi|3183172|sp|O13969|SYTM_SCHPO RecName: Full=Probable threonyl-tRNA synthetase, mitochondrial;
           AltName: Full=Threonine--tRNA ligase; Short=ThrRS;
           Flags: Precursor
 gi|2330792|emb|CAB11266.1| mitochondrial threonine-tRNA ligase [Schizosaccharomyces pombe]
          Length = 473

 Score =  347 bits (891), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 151/475 (31%), Positives = 238/475 (50%), Gaps = 39/475 (8%)

Query: 198 FKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFH 257
            KL K         S   +          T            ES   DHR +A    L+ 
Sbjct: 1   MKLKKFQLHTPFAHSCNRV-EIYTARFGPTPFSTKANNLKQPESTLNDHRTIAARQKLYT 59

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRA 316
            +    G IF+   G +I+  L+ ++R + +   +EEI TP +  + LW++SGHW +Y  
Sbjct: 60  TSILTPGSIFFLPHGTRIYNRLVDFLRAQYQIHGFEEIITPLIFKKDLWEKSGHWQNYEK 119

Query: 317 NMFAVKCADDTIKD--LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
            +F V+ + +   +    T+ LKPMNCPGH  V+    +SY+ELP+R A+F  ++RNE S
Sbjct: 120 EIFRVEESRNVEDEHSNATYGLKPMNCPGHCIVYASTERSYKELPLRFADFSPLHRNEAS 179

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
           G+L GL R+R F QDD H+FC+ E + +E       +  +Y   G  K+ + LSTRPE+ 
Sbjct: 180 GALSGLTRLRCFHQDDGHIFCSPESIKDEIKNTLTFVKQVYSLLGMNKLKLYLSTRPEEH 239

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           +GS   W++AEN ++  L     +        +  G+GAFYGPK + ++ DA G+  Q  
Sbjct: 240 IGSLDTWNEAENGLREALQESGETW------IINEGDGAFYGPKIDVMVADARGKWHQTA 293

Query: 495 TIQVDFNLPSRFNAFYVNSHSEK-------CHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           TIQ+DFNLP RF  +Y     +          PVMIHRA+FGS+ERF+GI+IE+  G+ P
Sbjct: 294 TIQLDFNLPQRFKLYYRTDAGDNAGSEKLIKQPVMIHRAIFGSLERFMGILIEHLNGHWP 353

Query: 548 LWLSPIQAIVTTI--TSSAVEYAQEIANL-------------LKSHHLSIETDFRNETIN 592
            WLSP  A++  +  T   + YA+++                L  +   ++ +   ++I 
Sbjct: 354 FWLSPRHAVILPVNQTDRILTYAKQVQKELSNQEVNESEFLPLNKNTYYVDINAEAQSIG 413

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRF---GSTTTQKVSLLDAIPILTKE 644
            ++RE  +      I+ G+ E  +  + +       S  T+K++    I  L KE
Sbjct: 414 KRLRESRLLNYNYEIVIGEDEVDKEILSVSSRHNHNSRDTRKMT----IQQLKKE 464


>gi|294632148|ref|ZP_06710708.1| threonyl-tRNA synthetase [Streptomyces sp. e14]
 gi|292835481|gb|EFF93830.1| threonyl-tRNA synthetase [Streptomyces sp. e14]
          Length = 442

 Score =  347 bits (890), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 127/424 (29%), Positives = 201/424 (47%), Gaps = 18/424 (4%)

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISY 282
                    +     EE+   DHRKL RE+DLF        G+ +W   G  +  TL  Y
Sbjct: 16  ECPGASACGRSPDVREETAMHDHRKLGRELDLFDTDPLLGAGLPYWLPDGATVRHTLEEY 75

Query: 283 MRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           +R  + +  Y  + +P +  + L++ SGHWD Y  +MF                L+P  C
Sbjct: 76  IRDAERRAGYRHVYSPVLGKRELYEISGHWDHYSDDMFPPMDLG-----GEQVVLRPSLC 130

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
           P H  ++     S+RELP+R+AE G +YR+E SG L GL RVR    +DAH+FCT +Q+ 
Sbjct: 131 PHHAVIYRSRAHSHRELPLRMAELGGMYRSELSGVLGGLTRVRAIQLNDAHIFCTLDQVA 190

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPE--KRVGSDALWDDAENIMKGVLDTIKNSS 459
            E      +I   Y+  G      +LS      K V +   W  A  ++  VLD      
Sbjct: 191 EEAGAALEMIRRAYEALGVTPARYRLSLPGPGGKYVAAPEKWRRATALLTEVLD------ 244

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
           +  +      GE AFYGPK +  + D+ GR+    T+QVDF+ P RF+  Y+ +   +  
Sbjct: 245 RSGLPYEAAEGEAAFYGPKIDVQVADSAGRESTLSTVQVDFHQPERFDLHYIGADGARHR 304

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH 579
           PVM+HR++ GS+ER +  ++E   G  P WL+P+Q +V  ++++ +  A+ +A       
Sbjct: 305 PVMVHRSIIGSVERAVAHLVEAHGGAFPAWLAPVQLVVLPVSAAELPQAEALARRCTDLG 364

Query: 580 LSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           L  E       T+  +IR   +  +P   + G KEA++  + +R             DA+
Sbjct: 365 LRAEIAAPERGTLGARIRASRL--VPYQAVIGAKEATDDHVSLRLRDGRRLPPQPTTDAL 422

Query: 639 PILT 642
             + 
Sbjct: 423 TRIN 426


>gi|297191715|ref|ZP_06909113.1| threonyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC
           25486]
 gi|197721430|gb|EDY65338.1| threonyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 408

 Score =  347 bits (890), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 123/405 (30%), Positives = 195/405 (48%), Gaps = 18/405 (4%)

Query: 243 KRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVL 300
             DHRKL RE+ LF      G+G+ +W   G  +  TL  Y+R  + +  Y  + +P + 
Sbjct: 1   MHDHRKLGRELGLFDTDPLIGAGLPYWLPDGATVRHTLEEYIRSAERRAGYRHVYSPVLG 60

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            + L++ SGHW  Y  +MF                L+P  CP H  ++     SYRELP+
Sbjct: 61  KRELYEISGHWAHYSDDMFPPMDLG-----GEQVVLRPSLCPHHAVIYRSRSHSYRELPL 115

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G +YR+E SG L GL RVR    +DAH+FCT +Q+  E      +I   Y+  G 
Sbjct: 116 RMAELGGMYRSELSGVLGGLTRVRAIQLNDAHIFCTLDQVAEEARAALEMIRRAYEALGI 175

Query: 421 EKIMVKLSTRPE--KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
                +LS      K V +   W  +  ++  VLD      +  +      GE AFYGPK
Sbjct: 176 TPARYRLSLPGPGGKYVAAPEKWKRSTALLTDVLD------RSGLPYEAAEGEAAFYGPK 229

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +  + D  GR+    T+QVDF+ P +F+  Y+ +   +  PVM+HR++ GS+ER +  +
Sbjct: 230 IDVQVTDGAGRESTLSTVQVDFHQPEQFDLHYIGADGARHRPVMVHRSIIGSVERAVAHL 289

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIRE 597
           IE   G  P WL+P Q  +  I+ + + +A  +A       L  E       T+  ++RE
Sbjct: 290 IEQHGGAFPAWLAPTQVAILPISDAELPHAAALARRCAGLGLRAEIAGPERGTLGARVRE 349

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             +  +P   + G KEA++  + +R  G        + + +  + 
Sbjct: 350 ARL--VPYQAVIGAKEAADDHVALRLRGGRRLDPQPVGEVLTRIV 392


>gi|159036441|ref|YP_001535694.1| threonyl-tRNA synthetase [Salinispora arenicola CNS-205]
 gi|157915276|gb|ABV96703.1| threonyl-tRNA synthetase [Salinispora arenicola CNS-205]
          Length = 405

 Score =  346 bits (888), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 131/417 (31%), Positives = 210/417 (50%), Gaps = 24/417 (5%)

Query: 243 KRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
             DHR+L RE+ LF        G+  W   G      +  Y+R  + +  ++ + TP + 
Sbjct: 1   MIDHRRLGRELGLFTSDPLAGAGLPLWLPAGAAARHAVEEYIRELERQAGHQHVLTPPLG 60

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            + L++ SGH D +  +MF        +     F L+P  CP H  V+    +S R+LP+
Sbjct: 61  KRELFELSGHLDFFADDMFPPM----RLSADDEFVLRPALCPHHALVYRSRGRSRRDLPL 116

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G +YR E SG L GL RVR  + +DAH FCT +Q+  E  +I  LI   +   G 
Sbjct: 117 RIAELGGMYRAERSGVLGGLARVRAISLNDAHNFCTLDQVGAEVAEILRLIREAHAALGV 176

Query: 421 EKIMVKLSTRPE--KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
                +LS R    + VG +A W+ AE +++  LD         +     +GE AFYGPK
Sbjct: 177 RPAGYRLSLRGPGERYVGDEADWERAEELLRAALD--------GVEYTEGVGEAAFYGPK 228

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +  + D+ GR+    T+Q+DF+ P RF+  YV+S   +  PVM+HR++ GS+ER  G +
Sbjct: 229 IDIQVVDSAGRESTLSTVQLDFDKPERFDLSYVDSGGARRRPVMVHRSLVGSMERLFGYL 288

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE  +G  P W +P+Q +V  I +     A+  A   ++  L  E   RN ++  +IRE 
Sbjct: 289 IEVHEGTFPAWYAPVQLVVLPIAAGQDSAAETFAAAGQAAGLRAEV-HRNGSLGGRIREA 347

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK-------ESLPP 648
           +  +IP   + G +EA+   + +R     +   +   +AI ++ +       E +PP
Sbjct: 348 ARARIPYAAVVGPREAAVGQVSLRLRDGRSLAPLPAAEAIALVARVVATRSPELVPP 404


>gi|21222189|ref|NP_627968.1| threonyl tRNA synthetase [Streptomyces coelicolor A3(2)]
 gi|10432482|emb|CAC10316.1| putative threonyl tRNA synthetase [Streptomyces coelicolor A3(2)]
          Length = 430

 Score =  346 bits (887), Expect = 7e-93,   Method: Composition-based stats.
 Identities = 130/433 (30%), Positives = 205/433 (47%), Gaps = 23/433 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMR 284
             +  +    +        DHR+L RE+ LF        G+ +W   G  +  TL  Y+R
Sbjct: 9   PRETTVHDRNHARSHDRDHDHRRLGRELALFDTDPLMGAGLPYWLPDGAVVRHTLEEYVR 68

Query: 285 R-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPG 343
             + +  Y  + +P +  + L++ SGHW+ YR +MF                L+P  CP 
Sbjct: 69  EAERRAGYRHVYSPVLGKRELYEISGHWEHYRDDMFPPMELG-----AEEVVLRPSLCPH 123

Query: 344 HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE 403
           H  V+    +SYRELP+R+AE G++YR+EPSG L GL RVR    +DAH+FCT +Q   E
Sbjct: 124 HALVYRSRARSYRELPLRIAELGAMYRSEPSGVLGGLSRVRAIHLNDAHIFCTPDQAAAE 183

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPE--KRVGSDALWDDAENIMKGVLDTIKNSSQD 461
                 LI   + D G      +LS      K V    LW  A  +++  LD        
Sbjct: 184 ARAALGLIRRAHADLGIRAARHRLSLPGPGGKYVADPELWRRATALLEEALD-------- 235

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
            +    + GE AFYGPK +  ++DA GR+    T+Q+DF+ P RF   Y+     +  PV
Sbjct: 236 GLPYEAVEGEAAFYGPKIDVQIEDAAGRESTLSTVQIDFHQPERFGLRYLGPDGARHRPV 295

Query: 522 MIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLS 581
           M+HR+V GS+ER +  +IE   G  P WL+P+Q +V  +  +  E A  +        L 
Sbjct: 296 MVHRSVIGSVERAVAHLIEAHGGAFPAWLAPVQLVVLPVAGAQREAAYALVRQATDLGLR 355

Query: 582 IET-DFRNETINYKIREHSIKKIPIIIICGDKEASERS-IGIRRFGSTTTQKVSLLDAIP 639
            E  D    ++  ++R    +K+P   + G +EA +   + +R        ++S  + + 
Sbjct: 356 AEVADPERGSLGARVRAA--RKVPYQAVIGVREAQDGDLVDVRLRDGRRPGQLSGTELLH 413

Query: 640 ILTK--ESLPPDC 650
            +T   E+  P+ 
Sbjct: 414 RITDRVEARGPEL 426


>gi|307328733|ref|ZP_07607905.1| threonyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113]
 gi|306885682|gb|EFN16696.1| threonyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113]
          Length = 412

 Score =  346 bits (887), Expect = 8e-93,   Method: Composition-based stats.
 Identities = 123/406 (30%), Positives = 197/406 (48%), Gaps = 20/406 (4%)

Query: 243 KRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
             DHRKL RE+ LF      G+G+ +W   G  +  TL  Y+R  + +  Y  + +P + 
Sbjct: 1   MSDHRKLGRELGLFDTDPLIGAGLPYWLPDGATVRHTLEEYIRDAERRAGYRHVYSPVLG 60

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            + L++ SGHW  Y  +MF                L+P  CP H  ++     SYRELP+
Sbjct: 61  KRELYELSGHWSHYSDDMFPPMELG-----AEQVVLRPSLCPHHAVIYRSRGHSYRELPL 115

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G +YR+E SG L GL RVR    +DAH+FCT +Q+ +E      +I   Y+  G 
Sbjct: 116 RMAELGGMYRSELSGVLGGLTRVRAIQLNDAHIFCTLDQVADEAGAALEMIRRAYEALGM 175

Query: 421 EKIMVKLSTRPE--KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
                +LS      K V +  +W  +  ++  VLD         +    + GE AFYGPK
Sbjct: 176 TPARYRLSLPGPGGKYVAAPEMWRRSTALLTDVLD------GSGLPYEAVEGEAAFYGPK 229

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +  + D  GR+    T+QVDF+ P +F+  Y+     +  PVM+HR++ GS+ER +  +
Sbjct: 230 IDVQVADGAGRESTLSTVQVDFHQPEQFDLHYIGPDGARHRPVMVHRSIIGSVERAVAHL 289

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET--INYKIR 596
           IE   G  P WL+P Q +V  I+ + + +A+ +        L  E     E   +  +IR
Sbjct: 290 IEEHGGAFPAWLAPTQLVVLPISEAELPHAEALVRRCVDLGLRAEL-AGPERGSLGARIR 348

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           E  +  +P   + G +EA +  + +R         + + +A+  + 
Sbjct: 349 EARL--VPYQAVVGAREAGDDRVALRLRDGRRLDPLPVGEALSRIN 392


>gi|6322654|ref|NP_012727.1| Mst1p [Saccharomyces cerevisiae S288c]
 gi|549032|sp|P07236|SYTM_YEAST RecName: Full=Threonyl-tRNA synthetase, mitochondrial; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS; Flags:
           Precursor
 gi|486345|emb|CAA82038.1| MST1 [Saccharomyces cerevisiae]
 gi|285813075|tpg|DAA08972.1| TPA: Mst1p [Saccharomyces cerevisiae S288c]
          Length = 462

 Score =  346 bits (887), Expect = 8e-93,   Method: Composition-based stats.
 Identities = 141/457 (30%), Positives = 230/457 (50%), Gaps = 44/457 (9%)

Query: 201 MKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAE 260
           MK+    W    N       Y T   T+   +     +          +++  DLF    
Sbjct: 1   MKIQLVRWHCSRNALWNRAFYSTRKATKNASSATPATMTSM-------VSQRQDLFMTDP 53

Query: 261 DGSGVIFWHRKGWKIFQTLISYM--RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANM 318
              G +F+   G KIF  LI +M  ++K K  + E+ TP +  + LW++SGHW++Y  +M
Sbjct: 54  LSPGSMFFLPNGAKIFNKLIEFMKLQQKFKFGFNEVVTPLIYKKTLWEKSGHWENYADDM 113

Query: 319 FAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLH 378
           F V+  D+   +   + LKPMNCPGH  +F    +SY ELP+R ++F  ++RNE SG+L 
Sbjct: 114 FKVETTDE---EKEEYGLKPMNCPGHCLIFGKKDRSYNELPLRFSDFSPLHRNEASGALS 170

Query: 379 GLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG---------FEKIMVKLST 429
           GL R+R F QDD H+FCT  Q+ +E      LI  +Y                  +  ST
Sbjct: 171 GLTRLRKFHQDDGHIFCTPSQVKSEIFNSLKLIDIVYNKIFPFVKGGSGAESNYFINFST 230

Query: 430 RPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGR 489
           RP+  +G   +W+ AE ++K +L+      +      +  G+GAFYGPK + ++ D + +
Sbjct: 231 RPDHFIGDLKVWNHAEQVLKEILEESGKPWK------LNPGDGAFYGPKLDIMVTDHLRK 284

Query: 490 DWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW 549
             Q  TIQ+DF LP RF+  + +  +    P+MIHRA FGSIERF+ ++I++ +G  P W
Sbjct: 285 THQVATIQLDFQLPERFDLKFKDQDNSYKRPIMIHRATFGSIERFMALLIDSNEGRWPFW 344

Query: 550 LSPIQAIVTTITSS---AVEYAQEIANLLKSH--------------HLSIETDFRNETIN 592
           L+P QA++  + +     ++    +   L++               H +++ D RNE + 
Sbjct: 345 LNPYQAVIIPVNTKNVQQLDMCTALQKKLRNELEADDMEPVPLNDWHFNVDLDIRNEPVG 404

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           Y+I+   +K    +II GD+E   +   IR   +  +
Sbjct: 405 YRIKSAILKNYSYLIIVGDEEVQLQKYNIRERDNRKS 441


>gi|155061091|gb|ABS90481.1| threonyl-tRNA synthetase [Streptomyces albus]
          Length = 439

 Score =  346 bits (887), Expect = 8e-93,   Method: Composition-based stats.
 Identities = 123/423 (29%), Positives = 195/423 (46%), Gaps = 18/423 (4%)

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISY 282
                          +E+   DHR+L RE++LF      G+G+ +W   G  +   L  Y
Sbjct: 16  ECPGASSCAHSPLVRKETTMHDHRRLGRELELFDTDPLIGAGLPYWLPDGAAVRHALEEY 75

Query: 283 MRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           +R  + +  Y  + +P +  + L++ SGHW  Y  +MF                L+P  C
Sbjct: 76  VRAAERRAGYRHVYSPVLGKRELYEISGHWSHYSEDMFPPMEVG-----GEQMLLRPSLC 130

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
           P H  ++    +S+RELP+R+AE G +YR E SG L GL RVR    +DAHVFCT +Q  
Sbjct: 131 PHHALIYRSRPRSHRELPLRMAELGGMYRAELSGVLGGLSRVRSIHLNDAHVFCTLDQAA 190

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPE--KRVGSDALWDDAENIMKGVLDTIKNSS 459
            E      +I   Y+  G      +LS      K V     W  +  ++  VLD      
Sbjct: 191 GEARAALEMIGRAYEALGIRPARFRLSLPGPGGKYVADPEKWRRSTALLTEVLDASG--- 247

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
              +    + GE AFYGPK +  + D  GR+    T+QVDF+ P RF   Y+ +      
Sbjct: 248 ---VAYEAVEGEAAFYGPKIDVQIADGQGRESTLSTVQVDFHQPERFGLRYIGADGAGHR 304

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH 579
           PVMIHR+V GS+ER +  ++E   G  P WL+P+Q  V  +T + V   +       +  
Sbjct: 305 PVMIHRSVIGSVERAVAHLVEEHGGAFPAWLAPVQIAVLPVTGAQVPDGEAFLRRCAALG 364

Query: 580 LSIE-TDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           L  E  D    ++  +IR   +  +P  ++ G++EA++  + +R         +   +A+
Sbjct: 365 LRAEQADPGRGSLGARIRAARL--VPYQVVIGEEEAADGRVALRLRDGRRVGPLPADEAL 422

Query: 639 PIL 641
             +
Sbjct: 423 ARI 425


>gi|152996743|ref|YP_001341578.1| tRNA synthetase class II (G H P and S) [Marinomonas sp. MWYL1]
 gi|150837667|gb|ABR71643.1| tRNA synthetase class II (G H P and S) [Marinomonas sp. MWYL1]
          Length = 395

 Score =  345 bits (886), Expect = 9e-93,   Method: Composition-based stats.
 Identities = 161/401 (40%), Positives = 246/401 (61%), Gaps = 13/401 (3%)

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLD 301
            + HR+LA ++DLFH  +   G++FWH  GW +FQ +  +MRR   +  ++E+ TPQ++ 
Sbjct: 1   MKTHRELAEQLDLFHSEQQAPGMLFWHPNGWHLFQNIQEHMRRCYRQYGFKEVRTPQLMK 60

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW  SGH D Y  +MF            + +ALKPM+CP H+ ++  G+ SYR+LP++
Sbjct: 61  KELWHISGHMDMYAQDMFF----GGEQNGDQEYALKPMSCPAHILMYKRGVHSYRDLPLK 116

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           L EFG V+RNE SGSL+G +R+R FTQDDAHVFC   Q+  E  +       IY D+G++
Sbjct: 117 LFEFGLVHRNESSGSLNGCLRLRQFTQDDAHVFCAWSQVKQEVGQFLQRAKQIYNDYGYQ 176

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + VK+ST+PEK +G DA W  AE+I+K           + +   + +GEGAFYGPK E 
Sbjct: 177 ALEVKISTQPEKALGDDASWRRAEDILKEACQA------ENVPFDIQVGEGAFYGPKIEL 230

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L+DA+GR WQCGTIQ+DFNLP RF   + N   +   P+++H+AV+GSIER+IGI++E 
Sbjct: 231 ALQDAVGRIWQCGTIQLDFNLPDRFELEFDNEQGKAEQPIILHQAVYGSIERWIGILLEV 290

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            +G LP W+ P    + ++  S ++YA ++   L+   +++  +F + ++  KI+     
Sbjct: 291 SQGVLPEWIHPQPVALVSVNDSVLDYANQLRAELEQQGINVSCEFGDHSVGRKIKRSFEL 350

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           KIP III G++EA    + IRR      + ++  + I  L 
Sbjct: 351 KIPNIIIIGEQEAQAGKLTIRR--GKHIEIINQEELISFLK 389


>gi|238484021|ref|XP_002373249.1| threonyl-tRNA synthetase [Aspergillus flavus NRRL3357]
 gi|220701299|gb|EED57637.1| threonyl-tRNA synthetase [Aspergillus flavus NRRL3357]
          Length = 526

 Score =  345 bits (885), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 143/457 (31%), Positives = 210/457 (45%), Gaps = 50/457 (10%)

Query: 206 AYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGV 265
            Y         LS       +      +       +   D+R L    DLF  +    G 
Sbjct: 22  RYTLQPPRLQWLSTTSTRPCSCSDPQPEQPPSQSSATPADYRALGTAQDLFTTSIYSPGS 81

Query: 266 IFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCA 324
             +   G  +   L+S++R +  +  + E+ TP +  + LW+ SGHW +Y+ +M+ V+  
Sbjct: 82  PLFLPNGTHVINKLVSFLRTQYLQYGFREVLTPTIYKRSLWEVSGHWQNYKDDMYEVRGR 141

Query: 325 ------DDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLH 378
                 +    +  ++ LKPMNCPGH  +F     SYRELP+R A+F  ++RNE SGSL 
Sbjct: 142 GAMGETEGEAGEDESYGLKPMNCPGHCLLFKSQNHSYRELPIRYADFSPLHRNEVSGSLS 201

Query: 379 GLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE-KRVGS 437
           GL RVR F QDD H+FC  +Q+ +E       +  +   FG     + LSTRPE   +GS
Sbjct: 202 GLTRVRRFHQDDGHIFCRPQQIKSEIASALGFVDMVMTTFGLGPYRLVLSTRPEKDFIGS 261

Query: 438 DALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ 497
             LWD AE+ ++  LD             +  G+GAFYGPK +  L+D  G+  Q  TIQ
Sbjct: 262 LELWDSAESQLREALDNSGR------EWALNEGDGAFYGPKIDIQLQDQAGKYHQLSTIQ 315

Query: 498 VDFNLPSRFNAFYVNSHSE---------KCHPVMIHRAVFGSIERFIGIMIENFKGNLPL 548
           +D NLP RF   Y  +  E         +  PV++HRA FGSIERF+ ++IE + G  P 
Sbjct: 316 LDMNLPQRFGLEYQVAEGEEDYNPATPGRARPVLVHRANFGSIERFLALLIEQYAGRWPF 375

Query: 549 WLSPIQAIVTTIT--SSAVEYAQEIANLLKSHHLSI-----------------------E 583
           WLSP Q IV T+      ++ A E A  +                              +
Sbjct: 376 WLSPRQGIVLTVNQDEKVLQQAHEAAAKIS--GFRALEPGQSGNNAPQPLSFVDSTFLID 433

Query: 584 TDFRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
            D   +T+  KI+     K   I I G K+ +E  + 
Sbjct: 434 VDDSPQTLGKKIQRAKQMKYNFIFIVGPKDVAESRVT 470


>gi|169767186|ref|XP_001818064.1| threonyl-tRNA synthetase [Aspergillus oryzae RIB40]
 gi|83765919|dbj|BAE56062.1| unnamed protein product [Aspergillus oryzae]
          Length = 526

 Score =  345 bits (885), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 143/457 (31%), Positives = 210/457 (45%), Gaps = 50/457 (10%)

Query: 206 AYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGV 265
            Y         LS       +      +       +   D+R L    DLF  +    G 
Sbjct: 22  RYTLRPPRLQWLSTTSTRPCSCSDPQPEQPPSQSSATPADYRALGTAQDLFTTSIYSPGS 81

Query: 266 IFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCA 324
             +   G  +   L+S++R +  +  + E+ TP +  + LW+ SGHW +Y+ +M+ V+  
Sbjct: 82  PLFLPNGTHVINKLVSFLRTQYLQYGFREVLTPTIYKRSLWEVSGHWQNYKDDMYEVRGR 141

Query: 325 ------DDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLH 378
                 +    +  ++ LKPMNCPGH  +F     SYRELP+R A+F  ++RNE SGSL 
Sbjct: 142 GAMGETEGEAGEDESYGLKPMNCPGHCLLFKSQNHSYRELPIRYADFSPLHRNEVSGSLS 201

Query: 379 GLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE-KRVGS 437
           GL RVR F QDD H+FC  +Q+ +E       +  +   FG     + LSTRPE   +GS
Sbjct: 202 GLTRVRRFHQDDGHIFCRPQQIKSEIASALGFVDMVMTTFGLGPYRLVLSTRPEKDFIGS 261

Query: 438 DALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ 497
             LWD AE+ ++  LD             +  G+GAFYGPK +  L+D  G+  Q  TIQ
Sbjct: 262 LELWDSAESQLREALDNSGR------EWALNEGDGAFYGPKIDIQLQDQAGKYHQLSTIQ 315

Query: 498 VDFNLPSRFNAFYVNSHSE---------KCHPVMIHRAVFGSIERFIGIMIENFKGNLPL 548
           +D NLP RF   Y  +  E         +  PV++HRA FGSIERF+ ++IE + G  P 
Sbjct: 316 LDMNLPQRFGLEYQVAEGEEDYNPATPGRARPVLVHRANFGSIERFLALLIEQYAGRWPF 375

Query: 549 WLSPIQAIVTTIT--SSAVEYAQEIANLLKSHHLSI-----------------------E 583
           WLSP Q IV T+      ++ A E A  +                              +
Sbjct: 376 WLSPRQGIVLTVNQDEKVLQQAHEAAAKIS--GFRALEPGQSGNNAPQPLSFVDSTFLID 433

Query: 584 TDFRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
            D   +T+  KI+     K   I I G K+ +E  + 
Sbjct: 434 VDDSPQTLGKKIQRAKQMKYNFIFIVGPKDVAESRVT 470


>gi|259147648|emb|CAY80898.1| Mst1p [Saccharomyces cerevisiae EC1118]
          Length = 462

 Score =  345 bits (884), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 134/411 (32%), Positives = 219/411 (53%), Gaps = 37/411 (9%)

Query: 247 RKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYM--RRKIKDDYEEINTPQVLDQHL 304
             +++  DLF       G +F+   G KIF  LI +M  ++K K  + E+ TP +  + L
Sbjct: 40  SMVSQRQDLFMTDPLSPGSMFFLPNGAKIFNKLIEFMKLQQKFKFGFNEVVTPLIYKKTL 99

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHW++Y  +MF V+  D+   +   + LKPMNCPGH  +F    +SY ELP+R ++
Sbjct: 100 WEKSGHWENYADDMFKVETTDE---EKEEYGLKPMNCPGHCLIFGKKDRSYNELPLRFSD 156

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG----- 419
           F  ++RNE SG+L GL R+R F QDD H+FCT  Q+ +E      LI  +Y         
Sbjct: 157 FSPLHRNEASGALSGLTRLRKFHQDDGHIFCTPSQVKSEIFNSLKLIDIVYNKIFPFVKG 216

Query: 420 ----FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                    +  STRP+  +G   +W+ AE ++K +L+      +      +  G+GAFY
Sbjct: 217 GSGAESNYFINFSTRPDHFIGDLKVWNHAEQVLKEILEESGKPWK------LNPGDGAFY 270

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK + ++ D + +  Q  TIQ+DF LP RF+  + +  +    P+MIHRA FGSIERF+
Sbjct: 271 GPKLDIMVTDHLRKTHQVATIQLDFQLPERFDLKFKDQDNSYKRPIMIHRATFGSIERFM 330

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSS---AVEYAQEIANLLKSH-------------- 578
            ++I++ +G  P WL+P QA++  + +     ++    +   L++               
Sbjct: 331 ALLIDSNEGRWPFWLNPYQAVIIPVNTKNVQQLDMCTALQKKLRNEREADDMEPVPLNDW 390

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           H +++ D RNE + Y+I+   +K    +II GD+E   +   IR   +  +
Sbjct: 391 HFNVDLDIRNEPVGYRIKSAILKNYSYLIIVGDEEVQLQKYNIRERDNRKS 441


>gi|151941725|gb|EDN60086.1| mitochondrial aminoacyl-tRNA synthetase, threonine [Saccharomyces
           cerevisiae YJM789]
 gi|190409649|gb|EDV12914.1| threonyl-tRNA synthetase, mitochondrial precursor [Saccharomyces
           cerevisiae RM11-1a]
 gi|323304221|gb|EGA57996.1| Mst1p [Saccharomyces cerevisiae FostersB]
 gi|323308307|gb|EGA61553.1| Mst1p [Saccharomyces cerevisiae FostersO]
 gi|323332690|gb|EGA74095.1| Mst1p [Saccharomyces cerevisiae AWRI796]
 gi|323354220|gb|EGA86064.1| Mst1p [Saccharomyces cerevisiae VL3]
          Length = 462

 Score =  345 bits (884), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 134/411 (32%), Positives = 219/411 (53%), Gaps = 37/411 (9%)

Query: 247 RKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYM--RRKIKDDYEEINTPQVLDQHL 304
             +++  DLF       G +F+   G KIF  LI +M  ++K K  + E+ TP +  + L
Sbjct: 40  SMVSQRQDLFMTDPLSPGSMFFLPNGAKIFNKLIEFMKLQQKFKFGFNEVVTPLIYKKTL 99

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHW++Y  +MF V+  D+   +   + LKPMNCPGH  +F    +SY ELP+R ++
Sbjct: 100 WEKSGHWENYADDMFKVETTDE---EKEEYGLKPMNCPGHCLIFGKKDRSYNELPLRFSD 156

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG----- 419
           F  ++RNE SG+L GL R+R F QDD H+FCT  Q+ +E      LI  +Y         
Sbjct: 157 FSPLHRNEASGALSGLTRLRKFHQDDGHIFCTPSQVKSEIFNSLKLIDIVYNKIFPFVKG 216

Query: 420 ----FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                    +  STRP+  +G   +W+ AE ++K +L+      +      +  G+GAFY
Sbjct: 217 GSGAESNYFINFSTRPDHFIGDLKVWNHAEQVLKEILEESGKPWK------LNPGDGAFY 270

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK + ++ D + +  Q  TIQ+DF LP RF+  + +  +    P+MIHRA FGSIERF+
Sbjct: 271 GPKLDIMVTDHLRKTHQVATIQLDFQLPERFDLKFKDQDNSYKRPIMIHRATFGSIERFM 330

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSS---AVEYAQEIANLLKSH-------------- 578
            ++I++ +G  P WL+P QA++  + +     ++    +   L++               
Sbjct: 331 ALLIDSNEGRWPFWLNPYQAVIIPVNTKNVQQLDMCTALQKKLRNEREADDMEPVPLNDW 390

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           H +++ D RNE + Y+I+   +K    +II GD+E   +   IR   +  +
Sbjct: 391 HFNVDLDIRNEPVGYRIKSAILKNYSYLIIVGDEEVQLQKYNIRERDNRKS 441


>gi|323336851|gb|EGA78113.1| Mst1p [Saccharomyces cerevisiae Vin13]
 gi|323347699|gb|EGA81963.1| Mst1p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 462

 Score =  344 bits (883), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 134/411 (32%), Positives = 219/411 (53%), Gaps = 37/411 (9%)

Query: 247 RKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYM--RRKIKDDYEEINTPQVLDQHL 304
             +++  DLF       G +F+   G KIF  LI +M  ++K K  + E+ TP +  + L
Sbjct: 40  SMVSQRQDLFMTDPLSPGSMFFLPNGAKIFNKLIEFMKLQQKFKFGFNEVVTPLIYKKTL 99

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHW++Y  +MF V+  D+   +   + LKPMNCPGH  +F    +SY ELP+R ++
Sbjct: 100 WEKSGHWENYADDMFKVETTDE---EKEEYGLKPMNCPGHCLIFGKKDRSYNELPLRFSD 156

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG----- 419
           F  ++RNE SG+L GL R+R F QDD H+FCT  Q+ +E      LI  +Y         
Sbjct: 157 FSPLHRNEASGALSGLTRLRKFHQDDGHIFCTPSQVKSEIFNSLKLIDIVYNKIFPFVKG 216

Query: 420 ----FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                    +  STRP+  +G   +W+ AE ++K +L+      +      +  G+GAFY
Sbjct: 217 GSGAESNYFINFSTRPDHFIGDLKVWNHAEQVLKEILEESGKPWK------LNPGDGAFY 270

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK + ++ D + +  Q  TIQ+DF LP RF+  + +  +    P+MIHRA FGSIERF+
Sbjct: 271 GPKLDIMVTDHLRKTHQVATIQLDFQLPERFDLKFKDQDNSYKRPIMIHRATFGSIERFM 330

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSS---AVEYAQEIANLLKSH-------------- 578
            ++I++ +G  P WL+P QA++  + +     ++    +   L++               
Sbjct: 331 ALLIDSNEGRWPFWLNPYQAVIIPVNTKNVQQLDMCTALQKKLRNEREADDMEPVPLNDW 390

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           H +++ D RNE + Y+I+   +K    +II GD+E   +   IR   +  +
Sbjct: 391 HFNVDLDIRNEPVGYRIKSAILKNYSYLIIVGDEEVQLQKYNIRERDNRKS 441


>gi|311273543|ref|XP_003133916.1| PREDICTED: threonyl-tRNA synthetase, cytoplasmic-like [Sus scrofa]
          Length = 328

 Score =  344 bits (883), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 127/316 (40%), Positives = 188/316 (59%), Gaps = 9/316 (2%)

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
           +   FALKPMNCPGH  +F+H  +S+RELP+R+A+FG ++RNE SG+L GL RVR F QD
Sbjct: 7   EKELFALKPMNCPGHCLMFDHRPRSWRELPLRIADFGVLHRNELSGALTGLTRVRRFQQD 66

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMK 449
           DAH+FC  EQ+ +E     + + ++Y  FGF   +  LSTRPEK +G   +W+ AE  ++
Sbjct: 67  DAHIFCAMEQIEDEIKGCLDFLRTVYSIFGFSFKLN-LSTRPEKFLGDIEVWNQAEKQLE 125

Query: 450 GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAF 509
             L+      +      +  G+GAFYGPK +  +KDAIGR  QC TIQ+D  LP RFN  
Sbjct: 126 NSLNEFGEKWE------LNPGDGAFYGPKIDIQIKDAIGRYHQCATIQLDXQLPIRFNLT 179

Query: 510 YVNSHS-EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYA 568
           +V+    +K  PV+IHRA+ GS+ER I I+ EN+ G  P WLSP Q +V  +  +  EYA
Sbjct: 180 FVSPDGDDKKRPVIIHRAILGSVERMIAILTENYGGKWPFWLSPRQVMVVPVGPTCDEYA 239

Query: 569 QEIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGST 627
           Q++          ++ D     T+N KIR   + +   I++ G+KE S  ++ IR   + 
Sbjct: 240 QKVQQQFHDAKFMVDIDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKSSGTVNIRTRDNK 299

Query: 628 TTQKVSLLDAIPILTK 643
              + ++ + +  L +
Sbjct: 300 VHGERTISETVGRLEQ 315


>gi|212531825|ref|XP_002146069.1| threonyl-tRNA synthetase [Penicillium marneffei ATCC 18224]
 gi|210071433|gb|EEA25522.1| threonyl-tRNA synthetase [Penicillium marneffei ATCC 18224]
          Length = 541

 Score =  344 bits (882), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 156/516 (30%), Positives = 241/516 (46%), Gaps = 52/516 (10%)

Query: 182 LCRGPHVRST---GQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
            CR  H+R+     + +   ++  VA   +     RP+  R   ++ +  Q         
Sbjct: 7   FCRRQHLRTNISWSRNRIVPEVASVAAVRYCSCHARPLTPRRQDSSASRPQSTDATSNAQ 66

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
             +   DHR L    +LF  +    G   +   G  I   LI ++R +  +  + E+ TP
Sbjct: 67  PSTPAADHRILGTAQELFTSSPYSPGSPLFLPNGTHIINKLIGFLRAQYRQYGFREVLTP 126

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCA------DDTIKDLRTFALKPMNCPGHVAVFNHG 351
            +  + LW+ SGHW +Y+ +M+ V+        +  + +   + LKPMNCPGH  +F   
Sbjct: 127 NIYKKSLWEISGHWQNYKDDMYEVRGRGATGETEGELGEDEQYGLKPMNCPGHCLLFKSQ 186

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI 411
             SYR+LPVR A+F  ++RNE SGSL GL RVR F QDD H+FC  +Q+  E       +
Sbjct: 187 NHSYRDLPVRYADFSPLHRNEISGSLSGLTRVRRFHQDDGHIFCRPQQIGKEIDLALTFV 246

Query: 412 ISIYKDFGFEKIMVKLSTRPE-KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
             + K FG  K  + LSTRPE   +GS  LWD AE  ++  LD      +  +   +  G
Sbjct: 247 NMVMKTFGLPKYNLVLSTRPEKDFIGSLELWDSAEEQLRQALD------KSGLPWELNEG 300

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE---------KCHPV 521
           +GAFYGPK +  L+D+ G+  Q  TIQ+D NLP RF   Y  +  E         K  PV
Sbjct: 301 DGAFYGPKIDIQLQDSDGKYHQLSTIQLDLNLPQRFELEYQVAEGEPDYDPNTPGKATPV 360

Query: 522 MIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSS--AVEYAQEIANLLKSHH 579
           +IHRA+FGS+ERF+ ++IE + G  P WLSP Q I+ T+ S    +  A+E A     + 
Sbjct: 361 LIHRAIFGSLERFLALLIERYAGRWPFWLSPRQGIILTVQSDEPVLRLAEEAAAKFSGYD 420

Query: 580 ------------------------LSIETDFRNETINYKIREHSIKKIPIIIICGDKEAS 615
                                     I+ D  + +++ KI+     K  +I + G K  +
Sbjct: 421 TIIPRLHSEDAELQQPAPLTSEPTFLIDIDSSSRSLSKKIQRAKSMKYNLIFVVGSKNLA 480

Query: 616 ERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           ++++ +   G               +  E + P  Q
Sbjct: 481 DKTMDVDVSGQLQGSTEDGASNFQSVLTELIGPSSQ 516


>gi|172012|gb|AAA34808.1| thr-tRNA-synthetase [Saccharomyces cerevisiae]
          Length = 462

 Score =  344 bits (882), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 140/457 (30%), Positives = 229/457 (50%), Gaps = 44/457 (9%)

Query: 201 MKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAE 260
           MK+    W    N       Y T   T+   +     +          +++  DLF    
Sbjct: 1   MKIQLVRWHCSRNALWNRAFYSTRKATKNASSATPATMTSM-------VSQRQDLFMTDP 53

Query: 261 DGSGVIFWHRKGWKIFQTLISYM--RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANM 318
              G +F+   G KIF  LI +M  ++K K  + E+ TP +  + LW++SGHW++Y  +M
Sbjct: 54  LSPGSMFFLPNGAKIFNKLIEFMKLQQKFKFGFNEVVTPLIYKKTLWEKSGHWENYADDM 113

Query: 319 FAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLH 378
           F V+  D+   +   + LKPMNCPGH  +F    +SY ELP+R ++F  ++RNE SG+L 
Sbjct: 114 FKVETTDE---EKEEYGLKPMNCPGHCLIFGKKDRSYNELPLRFSDFSPLHRNEASGALS 170

Query: 379 GLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG---------FEKIMVKLST 429
           GL R+R F QDD H+FCT  Q+ +E      LI  +Y                  +  ST
Sbjct: 171 GLTRLRKFHQDDGHIFCTPSQVKSEIFNSLKLIDIVYNKIFPFVKGGSGAESNYFINFST 230

Query: 430 RPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGR 489
           RP+  +G   +W+ AE ++K +L+      +      +   +GAFYGPK + ++ D + +
Sbjct: 231 RPDHFIGDLKVWNHAEQVLKEILEESGKPWK------LNPSDGAFYGPKLDIMVTDHLRK 284

Query: 490 DWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW 549
             Q  TIQ+DF LP RF+  + +  +    P+MIHRA FGSIERF+ ++I++ +G  P W
Sbjct: 285 THQVATIQLDFQLPERFDLKFKDQDNSYKRPIMIHRATFGSIERFMALLIDSNEGRWPFW 344

Query: 550 LSPIQAIVTTITSS---AVEYAQEIANLLKSH--------------HLSIETDFRNETIN 592
           L+P QA++  + +     ++    +   L++               H +++ D RNE + 
Sbjct: 345 LNPYQAVIIPVNTKNVQQLDMCTALQKKLRNELEADDMEPVPLNDWHFNVDLDIRNEPVG 404

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           Y+I+   +K    +II GD+E   +   IR   +  +
Sbjct: 405 YRIKSAILKNYSYLIIVGDEEVQLQKYNIRERDNRKS 441


>gi|303318040|ref|XP_003069022.1| threonyl-tRNA synthetase, putative [Coccidioides posadasii C735
           delta SOWgp]
 gi|240108703|gb|EER26877.1| threonyl-tRNA synthetase, putative [Coccidioides posadasii C735
           delta SOWgp]
 gi|320036822|gb|EFW18760.1| threonyl-tRNA synthetase [Coccidioides posadasii str. Silveira]
          Length = 598

 Score =  344 bits (882), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 157/486 (32%), Positives = 235/486 (48%), Gaps = 46/486 (9%)

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
             +  +  + P       +        +  A       R  ++R       + +      
Sbjct: 63  HNQAIETAQDPCNELPSDIVTNADNQAIGTAQNSYRERRDKVTRPNSRTARSARHPDDEA 122

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEI 294
             ++     DHR +  + DLF       G  ++H  G  IF  L+S++R +  +  +EE+
Sbjct: 123 PPIDSVTGIDHRIIGTDQDLFGSTPFSPGSPYFHPDGAHIFNKLMSFLRAQYKQYGFEEV 182

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCA-------DDTIKDLRTFALKPMNCPGHVAV 347
            TP +  + LW++SGHW  Y+ +M+ V+         D  I +   + LKPMNCPGH  +
Sbjct: 183 ITPTMYKKSLWEKSGHWHIYKDDMYEVRGRGATGQTVDVEIGEDEQYGLKPMNCPGHCVL 242

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
           F    +SYR LPVR AEF  ++RNE SGSL GL RVR F QDD H+FC  EQ+  E    
Sbjct: 243 FASKTRSYRSLPVRFAEFSPLHRNEISGSLSGLTRVRRFHQDDGHIFCRPEQIEREIELT 302

Query: 408 HNLIISIYKDFGFEKIMVKLSTRPE-KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
                S+   FG E   + LSTRPE   +GS ALW+DAEN +K  LD             
Sbjct: 303 LQFTESVLSTFGLEDYRLVLSTRPEKDYLGSLALWNDAENQLKDALDKSGKPWH------ 356

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE-------KCH 519
           +  G+GAFYGPK +  ++D+ G+  Q  TIQ+D NLP RF   YV   +E       K  
Sbjct: 357 INEGDGAFYGPKIDLQIRDSRGKYHQLSTIQLDMNLPQRFGLEYVVPGTETDVNGPRKAT 416

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSS--AVEYAQEIANLLK- 576
           PV+IHRA+FGS+ERF  ++ E++ G  P WLSP Q I+ T+ +    +  AQ +A+ ++ 
Sbjct: 417 PVLIHRAIFGSLERFFALLAEHYNGRWPFWLSPRQGIILTVNNDPQVLRTAQTVASGMRG 476

Query: 577 ---------------------SHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEAS 615
                                     I+ D  + ++  KIRE   +K  ++ + G  + S
Sbjct: 477 YQSLTFNESEVVATPGLLYPAQATFQIDVDTSSRSLGKKIREAMGRKYKLVFVIGPSDVS 536

Query: 616 ERSIGI 621
             S+G+
Sbjct: 537 NGSVGV 542


>gi|83645563|ref|YP_433998.1| threonyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
 gi|83633606|gb|ABC29573.1| Threonyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
          Length = 415

 Score =  344 bits (882), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 156/410 (38%), Positives = 249/410 (60%), Gaps = 13/410 (3%)

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLD 301
            ++HR +A E+DLFH    G G+ FWH +GW++F+T+ +++R   + + ++E+ TPQ L 
Sbjct: 1   MKNHRDIAEELDLFHSEAQGPGMAFWHPRGWRMFRTVKNHIRAAYEAESFQEVATPQFLK 60

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + LW+ SGHW+ Y  +MF      +       +ALKPM+CP H+ ++  G++SY+ LP+R
Sbjct: 61  RELWETSGHWEKYADDMFVGAGFGEEP----EYALKPMSCPAHILLYKRGVRSYKSLPLR 116

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           L EFG V+RNE SG+L+GLMR+R FTQDDAHVFC  +Q+  E          +Y D+G+ 
Sbjct: 117 LFEFGLVHRNERSGALNGLMRLRQFTQDDAHVFCRWDQVSQEIQAFLRRAERVYADYGYG 176

Query: 422 KIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           +  V +STRP++   G+   W+ AE ++       +  +          GEGAFYGPK E
Sbjct: 177 RPQVFISTRPQRDYFGAPEDWERAELML------AEACAAASAEFVRQEGEGAFYGPKIE 230

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
             LKD  GR WQ GTIQ+DFN+P RF+  Y+++  E+  PV++H+AV+GSIER+IG+++E
Sbjct: 231 LALKDGQGRQWQMGTIQLDFNMPERFDLHYIDAAGERRRPVILHQAVYGSIERWIGVLLE 290

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
            ++  LP W+ P   ++ ++   AV Y + +  LL+ H + +E D  N+++  K++    
Sbjct: 291 TYQAALPAWVHPQPVVLASVGQDAVAYCESVGELLRRHGVPVEMDLANDSLAKKMKVLRR 350

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDC 650
            K P+++I G +E +  SI +RR G       S  + + I+ +     DC
Sbjct: 351 YKTPLVLIAGAQEMANDSIVVRRRGGEQALA-SRDELVAIVREALSVADC 399


>gi|119494491|ref|XP_001264141.1| threonyl-tRNA synthetase [Neosartorya fischeri NRRL 181]
 gi|119412303|gb|EAW22244.1| threonyl-tRNA synthetase [Neosartorya fischeri NRRL 181]
          Length = 530

 Score =  343 bits (879), Expect = 6e-92,   Method: Composition-based stats.
 Identities = 144/429 (33%), Positives = 212/429 (49%), Gaps = 46/429 (10%)

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLD 301
             D+R L    DLF  +    G   +   G  +   LIS++R +  +  + E+ TP +  
Sbjct: 63  NTDYRALGTAQDLFTTSIYSPGSPLFLPNGTHVINRLISFLRTQYLQYGFREVLTPTIYK 122

Query: 302 QHLWQQSGHWDSYRANMFAVKCA------DDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           + LW+ SGHW +Y+ +M+ VK        D    +  ++ LKPMNCPGH  +F     SY
Sbjct: 123 RSLWEVSGHWQNYKDDMYEVKGRGATGEADGETGEDESYGLKPMNCPGHCLLFKSQNHSY 182

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP+R A+F  ++RNE SG+L GL RVR F QDD H+FC  +Q+  E       +  + 
Sbjct: 183 RELPIRYADFSPLHRNEISGALSGLTRVRRFHQDDGHIFCRPQQIKGEIASALGFVDMVM 242

Query: 416 KDFGFEKIMVKLSTRPE-KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
             FG     + LSTRPE   +GS  LWD AE  ++  LD             +  G+GAF
Sbjct: 243 TTFGLGPYRLVLSTRPEKDFIGSLELWDSAETQLREALDNSGR------EWAMNEGDGAF 296

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE---------KCHPVMIHR 525
           YGPK +  L+D  G+  Q  TIQ+D NLP RF   Y  +  E         +  PV++HR
Sbjct: 297 YGPKIDIQLQDQAGKYHQLSTIQLDMNLPQRFGLEYQVAEGEEDYNPATPGRATPVLVHR 356

Query: 526 AVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT--SSAVEYAQEIANLLKSHHLSI- 582
           A FGS+ERF+ ++IE + G  P WLSP Q I+ T+    + ++ AQE A  +      + 
Sbjct: 357 ANFGSLERFLALLIEQYAGRWPFWLSPRQGIILTVNQDEAVLQQAQEAAAKISGFRPHVA 416

Query: 583 --------------------ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
                               + D  ++T+  KI+     K  +I I G K+ ++ SI + 
Sbjct: 417 SKDNVTSPKPLSSVDSTYLIDVDTSSQTLGKKIQRAKQMKYNLIFILGPKDVADSSITVD 476

Query: 623 RFGSTTTQK 631
             G   T+ 
Sbjct: 477 VTGQMQTKT 485


>gi|54400362|ref|NP_001005932.1| threonyl-tRNA synthetase, cytoplasmic isoform 2 [Danio rerio]
 gi|53734186|gb|AAH83525.1| Zgc:92586 [Danio rerio]
          Length = 624

 Score =  343 bits (879), Expect = 6e-92,   Method: Composition-based stats.
 Identities = 135/320 (42%), Positives = 189/320 (59%), Gaps = 9/320 (2%)

Query: 326 DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRG 385
           D       FALKPMNCPGH  +F+H  +S+RELP+RLA+FG ++RNE SG+L GL RVR 
Sbjct: 299 DPKMLKEIFALKPMNCPGHCLMFDHRPRSWRELPLRLADFGVLHRNELSGALTGLTRVRR 358

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
           F QDDAH+FC+ +Q+ +E     + + ++Y  FGF   +  LSTRPEK +G   +WD AE
Sbjct: 359 FQQDDAHIFCSMDQIESEIKGCLDFLRTVYDVFGFTFKLN-LSTRPEKFLGEPEVWDQAE 417

Query: 446 NIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSR 505
             ++  L+             +  G+GAFYGPK +  +KDAIGR  QC TIQ+DF LP R
Sbjct: 418 KQLENSLNDFGEKW------VLNPGDGAFYGPKIDIQIKDAIGRYHQCATIQLDFQLPIR 471

Query: 506 FNAFYVNSHS-EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA 564
           FN  +V+    +K  PV+IHRA+ GS+ER I I+ EN+ G  PLWLSP Q +V  I  + 
Sbjct: 472 FNLTFVSHDGDDKKRPVIIHRAILGSVERMIAILTENYGGKWPLWLSPRQVMVVPIGPTC 531

Query: 565 VEYAQEIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRR 623
            EYAQ +        L  + D     T+N KIR   + +   I++ G+KE S  ++ +R 
Sbjct: 532 DEYAQRVQKEFHKVGLMTDVDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKSSDTVNVRT 591

Query: 624 FGSTTTQKVSLLDAIPILTK 643
             +    + SL D +  L +
Sbjct: 592 RDNKVHGERSLTDCMERLKQ 611



 Score =  218 bits (554), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 99/379 (26%), Positives = 154/379 (40%), Gaps = 25/379 (6%)

Query: 2   PSDIKLTFPDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
              IK+T PDG + +      T   VA  IS+ LA   V    N  V DL  P+  + S+
Sbjct: 75  SKPIKITLPDGKVVDGESWKTTPYQVACGISQGLADNTVISKANNGVWDLDRPLEEDCSL 134

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDE 118
             +  +D  + AV  HS AHIM EA++ ++    +  GP IE+GFYYD   + +  SS++
Sbjct: 135 VFLKFDDEEAQAVYWHSSAHIMGEAMERVYGGC-LCYGPPIENGFYYDMYLDNEGVSSND 193

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
              +E   ++II    PF +  +  E   E+F+     +K  IL         T+YR G 
Sbjct: 194 FPCLENLCKKIIKEKQPFERLEVKKETLLEMFKY--NKFKCRILNEKVTTPTTTVYRCGP 251

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLCRGPHVR TG++K   K+ K +  YW G ++   L RIYG ++   + L +     
Sbjct: 252 LIDLCRGPHVRHTGKIK-AMKIHKNSSTYWEGKADMESLQRIYGISFPDPKMLKEIFALK 310

Query: 239 EESEKRDHRKL-AREMDLFHIAEDGSGVIFWHRK---GWKIFQTLISYMRRKIKDDYEEI 294
             +          R      +    +     HR    G      L    R +  D +   
Sbjct: 311 PMNCPGHCLMFDHRPRSWRELPLRLADFGVLHRNELSGA--LTGLTRVRRFQQDDAHIFC 368

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
           +  Q+  +           Y    F  K    T  +      K +  P          ++
Sbjct: 369 SMDQIESEIKGCLDFLRTVYDVFGFTFKLNLSTRPE------KFLGEPEV------WDQA 416

Query: 355 YRELPVRLAEFGSVYRNEP 373
            ++L   L +FG  +   P
Sbjct: 417 EKQLENSLNDFGEKWVLNP 435


>gi|302545670|ref|ZP_07298012.1| threonine-tRNA ligase [Streptomyces hygroscopicus ATCC 53653]
 gi|302463288|gb|EFL26381.1| threonine-tRNA ligase [Streptomyces himastatinicus ATCC 53653]
          Length = 403

 Score =  342 bits (878), Expect = 8e-92,   Method: Composition-based stats.
 Identities = 123/398 (30%), Positives = 195/398 (48%), Gaps = 18/398 (4%)

Query: 243 KRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVL 300
             DHRKL RE+ LF      G+G+ +W   G  + + L  Y+R  + +  Y  + +P + 
Sbjct: 1   MYDHRKLGRELGLFGTDPLIGAGLPYWLPDGAAVREALEEYIRAEERRAGYRHVYSPVLG 60

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            + L++ SGHW  YR +MF                L+P  CP H  ++    +SYRELP+
Sbjct: 61  KRELYEVSGHWAHYRDDMFPPMDVG-----GEEVVLRPSLCPHHAVIYRSRARSYRELPL 115

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G +YR E SG L GL RVR    +DAH+FC  EQ+  E      +I   Y+  G 
Sbjct: 116 RMAELGGMYRAELSGVLGGLTRVRAIQLNDAHIFCALEQVAGEVEGALGMIRRAYEAMGI 175

Query: 421 EKIMVKLSTRPE--KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
             +  +LS   +  K V    +W+ +  ++  VL  +       +   V  GE AFYGPK
Sbjct: 176 RAVRYRLSLPGDSGKFVAGSEVWERSVGVLGEVLRRVG------VPYEVGKGEAAFYGPK 229

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +  + D  GR++   T+QVDF+ P RF   YV +   K  PVM+HR++ GS+ER +  +
Sbjct: 230 IDVQVADGAGREFTLSTVQVDFHQPERFGLQYVGADGAKHRPVMVHRSIIGSVERAVAQL 289

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIRE 597
           +E   G  P WL+P+Q +V  ++     +A+          L    D     ++  ++R 
Sbjct: 290 VEVHGGAFPGWLAPVQVVVLPVSEGEAGHAEAFVERCVERGLRARVDGPERGSLGARVRG 349

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
             +  +P  ++ G KEA+E  + +R  G      ++  
Sbjct: 350 ARL--VPYQVVIGAKEAAEGQVALRLRGGRQVGVMAAE 385


>gi|256394768|ref|YP_003116332.1| threonyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
 gi|256360994|gb|ACU74491.1| threonyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
          Length = 409

 Score =  342 bits (877), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 125/406 (30%), Positives = 201/406 (49%), Gaps = 18/406 (4%)

Query: 243 KRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           + DHR+L RE+ LF      G+G+ +W   G  +   +  Y+R  + +  Y+ + +P + 
Sbjct: 5   QHDHRRLGRELGLFDTDPLIGAGLPYWLPDGAVVRHAVEEYIRSVERRAGYQHVYSPVLG 64

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            + L++ SGHW  Y  +MF                L+P  CP H  ++     SYRELP+
Sbjct: 65  KRELYEISGHWSHYSEDMFPPMDLG-----AEQMVLRPSLCPTHALIYRSRAHSYRELPL 119

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G ++R+E SG+L GL RVR  T +DAH+FCT EQ+  E      LI   Y+  G 
Sbjct: 120 RMAEIGGMFRSEMSGALGGLTRVRAITLNDAHIFCTLEQVAQEAQDALKLIRDAYEALGI 179

Query: 421 EKIMVKLSTRPE--KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           E   ++LS      K V    +W  A  +++ VLD         +      GE AFYGPK
Sbjct: 180 EAARIRLSLPGPGGKYVDKPQMWQRATAMLREVLDASG------LAYEEAEGEAAFYGPK 233

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +  + D  GR+    T+Q+DF+ P +F   Y+ +   +  PVM+HR++ GS+ER +  +
Sbjct: 234 IDIQIADPAGRESTLSTVQIDFHQPEQFALEYIGADGARHRPVMVHRSIVGSMERVVAHL 293

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIET-DFRNETINYKIRE 597
           IE   G  P WL+P+Q  V  +       A+   +L     L  E  D    ++  +IRE
Sbjct: 294 IEQHGGAFPAWLAPVQVAVLPVGEDEAGAARAFHDLCLDLGLRSELMDPERGSLGARIRE 353

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             +  +P   + G +EA+  ++ IR       + +S+ +A   + +
Sbjct: 354 ARL--VPYQAVIGGREAAADAVAIRLRDGRKLEPMSVAEAGKRMVE 397


>gi|300790769|ref|YP_003771060.1| threonyl-tRNA synthetase [Amycolatopsis mediterranei U32]
 gi|299800283|gb|ADJ50658.1| threonyl-tRNA synthetase [Amycolatopsis mediterranei U32]
          Length = 390

 Score =  342 bits (877), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 125/408 (30%), Positives = 193/408 (47%), Gaps = 20/408 (4%)

Query: 243 KRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
             DHRKL RE+ LF      G+G+ +W   G  +  +L  Y+R  + +  Y+ +++P + 
Sbjct: 1   MPDHRKLGRELGLFGTDPLIGAGLPYWLPDGAIVRHSLEEYVRNLERRAGYQHVHSPVLG 60

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            + L++ SGHW  YR  M+                L+P  CP H  ++    +SYRELP+
Sbjct: 61  KRELYEISGHWSHYRDEMYPPMDVG-----GEQLVLRPSLCPHHALIYRSRGRSYRELPL 115

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G +YR+E SG L GL RVR    +DAHVFCT +Q+  E      LI   Y   G 
Sbjct: 116 RMAEIGGMYRSELSGVLGGLSRVRAIQLNDAHVFCTLDQVEAEAAAALALIRRAYDALGI 175

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
                +LS            W  A  I++ VLD         +      GE AFYGPK +
Sbjct: 176 SPARYRLSLPGPGGKYVPGNWAGAVEILRSVLDD--------LPYDAAEGEAAFYGPKID 227

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
             + D  GR+    T+QVDF+ P+RF   YV +   K  PVM+HR++ GS+ER +  +IE
Sbjct: 228 VQIADGAGRESTLSTVQVDFHQPARFGLEYVGADGAKHRPVMVHRSIIGSVERAVAQLIE 287

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              G  P WL+P+Q  +  +++  V YA+E+        +  E      ++  +IR+  +
Sbjct: 288 VHGGAFPAWLAPVQLRLLPVSAVEVPYAREVLERCGD--VRAEI-ASEGSLGARIRDGRL 344

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
             +P   + G  E +   + +R             + +  +  E   P
Sbjct: 345 --VPYQAVIGPAEVAAGQLSVRLRDGRRLDAAGAEEMLARIGAEVRRP 390


>gi|315501868|ref|YP_004080755.1| tRNA synthetase class ii (g h p and s) [Micromonospora sp. L5]
 gi|315408487|gb|ADU06604.1| tRNA synthetase class II (G H P and S) [Micromonospora sp. L5]
          Length = 404

 Score =  342 bits (877), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 125/403 (31%), Positives = 209/403 (51%), Gaps = 17/403 (4%)

Query: 243 KRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
             DHR+L R+++LF        G+  W   G      +  Y+R  + +  Y+ + +P + 
Sbjct: 1   MIDHRRLGRDLELFVSDPLAGAGLPIWLPAGAAARHAVEEYVRELERRAGYQHVYSPPLG 60

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            + L+++SGH   +  +MF        +     F L+P  CP H  VF    +SYRELP+
Sbjct: 61  KRELFERSGHLGYFADDMFPPM----RLSADDEFVLRPALCPHHALVFRARGRSYRELPL 116

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G +YR E SG L GL RVR  + +DAH FC  EQ+ +E  +I  LI   +   G 
Sbjct: 117 RVAELGGMYRAERSGVLGGLSRVRAISLNDAHNFCALEQVGDEVREILRLIGEAHAALGV 176

Query: 421 EKIMVKLSTR--PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
               ++LS R   ++ VG DA W  AE +++  LD         ++     GE AFYGPK
Sbjct: 177 RPAGLRLSLRGPDQRYVGDDAGWARAEELLRAALD--------GVDVVEAPGEAAFYGPK 228

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +  + DA GR+    T+Q+DF+ P RF+  Y +S   +  PVM+HR++ GS+ER    +
Sbjct: 229 IDIQIVDAAGRESTISTVQLDFDKPERFDLSYTDSDGRRKRPVMVHRSLVGSMERLFAYL 288

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE  +G  P W +P+Q ++  + ++  + A  +A   ++  L  E D    ++  +IR+ 
Sbjct: 289 IEVHEGAFPAWYAPVQLLLLPVDAAQADAAVGLARRAEAAGLRAEVDHAG-SLGARIRDA 347

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           S +++P   + G +EA++ S+ +R         +   +A+ ++
Sbjct: 348 SRRRVPYTGVLGPREAADGSVSLRLRDGRVLDPMPAAEALGLI 390


>gi|70996464|ref|XP_752987.1| threonyl-tRNA synthetase [Aspergillus fumigatus Af293]
 gi|66850622|gb|EAL90949.1| threonyl-tRNA synthetase [Aspergillus fumigatus Af293]
 gi|159131721|gb|EDP56834.1| threonyl-tRNA synthetase [Aspergillus fumigatus A1163]
          Length = 535

 Score =  342 bits (876), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 146/447 (32%), Positives = 216/447 (48%), Gaps = 50/447 (11%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++    Q       +   D+R L    DLF  +    G   +   G  +   LIS++R +
Sbjct: 52  SEAHAEQSPAPASTAPSTDYRALGTAQDLFTTSIYSPGSPLFLPNGTHVINRLISFLRTQ 111

Query: 287 I-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCA------DDTIKDLRTFALKPM 339
             +  + E+ TP +  + LW+ SGHW +Y+ +M+ VK        D    +  ++ LKPM
Sbjct: 112 YLQYGFREVLTPTIYKRSLWEVSGHWQNYKDDMYEVKGRGATGEADGETGEDESYGLKPM 171

Query: 340 NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQ 399
           NCPGH  +F     SYRELP+R A+F  ++RNE SG+L GL RVR F QDD H+FC  +Q
Sbjct: 172 NCPGHCLLFKSQNHSYRELPIRYADFSPLHRNEISGALSGLTRVRRFHQDDGHIFCRPQQ 231

Query: 400 MFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE-KRVGSDALWDDAENIMKGVLDTIKNS 458
           +  E       +  +   FG     + LSTRPE   +GS  LWD AE  ++  LD     
Sbjct: 232 IKGEIASALGFVDMVMTTFGLGPYRLVLSTRPEKDFIGSLELWDSAEAQLREALDNSGR- 290

Query: 459 SQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE-- 516
                   +  G+GAFYGPK +  L+D  G+  Q  TIQ+D NLP RF   Y  +  E  
Sbjct: 291 -----EWAMNEGDGAFYGPKIDIQLQDQAGKYHQLSTIQLDMNLPQRFGLEYQVAEGEED 345

Query: 517 -------KCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT--SSAVEY 567
                  +  PV++HRA FGS+ERF+ ++IE + G  P WLSP Q I+ T+    + ++ 
Sbjct: 346 YNPATPGRATPVLVHRANFGSLERFLALLIEQYAGRWPFWLSPRQGIILTVNQDEAVLQQ 405

Query: 568 AQEIANLLKSHHLS-----------------------IETDFRNETINYKIREHSIKKIP 604
           AQE A  +                             I+ D  ++T+  KI+     K  
Sbjct: 406 AQEAAAKIS--GYRPLVAGQDNATSPKPLSSVDSTYLIDVDTSSQTLGKKIQRAKQMKYN 463

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQK 631
           +I I G K+ ++ SI +   G   T+ 
Sbjct: 464 LIFILGPKDVADSSITVDVTGQMQTKT 490


>gi|158314451|ref|YP_001506959.1| threonyl-tRNA synthetase [Frankia sp. EAN1pec]
 gi|158109856|gb|ABW12053.1| threonyl-tRNA synthetase [Frankia sp. EAN1pec]
          Length = 428

 Score =  341 bits (875), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 130/418 (31%), Positives = 202/418 (48%), Gaps = 20/418 (4%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMR-RKIK 288
           +       EE+   DHRKL RE+DLF      G+G+ +W   G  +  TL  Y+R  + +
Sbjct: 1   MRSLARSREETTMHDHRKLGRELDLFDTDPLIGAGLPYWLPDGAAVRHTLEEYIRTAERR 60

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
             Y+ + +P +  + L++ SGHW  Y  +MF                L+P  CP H  ++
Sbjct: 61  AGYQHVYSPVLGKRELYEISGHWSHYSDDMFPPMDLG-----GEQIVLRPSLCPHHALIY 115

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
                SYR+LP+R+AE G +YR+E SG L GL RVR    +DAH+FCT +Q+ +E     
Sbjct: 116 RSRSHSYRDLPLRIAELGGMYRSELSGVLGGLTRVRAIHLNDAHIFCTLDQVADEARNAL 175

Query: 409 NLIISIYKDFGFEKIMVKLSTRPE--KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           ++I   Y+  G      +LS      K V +  LW  +  ++  VLD      Q  +   
Sbjct: 176 DMIRHAYEALGITPRRYRLSLPGPGGKYVAAPELWQRSTALLTDVLD------QAGLPYE 229

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
              GE AFYGPK +  + D  GR+    TIQVDF+ P +F+  Y+   S +  PVM+HR+
Sbjct: 230 AAEGEAAFYGPKIDVQIIDGAGRESTLSTIQVDFHQPEQFDLHYIGPDSARHRPVMVHRS 289

Query: 527 VFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF 586
           + GS+ER +  +IE   G  P WL+P Q +V  IT S +  A  +A       L  +   
Sbjct: 290 IIGSVERAVAHLIEQHGGAFPAWLAPTQIVVLPITDSELPNAAALARQCTDLGLRAQI-I 348

Query: 587 RNET--INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             E   +  ++R    K +P   + G +E+++  I +R             D +  ++
Sbjct: 349 GPERGSLGARVR--QSKLVPYQAVIGAQESTDGHIALRLRDGHRLDPQPTGDILSRIS 404


>gi|121700783|ref|XP_001268656.1| threonyl-tRNA synthetase [Aspergillus clavatus NRRL 1]
 gi|119396799|gb|EAW07230.1| threonyl-tRNA synthetase [Aspergillus clavatus NRRL 1]
          Length = 532

 Score =  341 bits (874), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 147/449 (32%), Positives = 215/449 (47%), Gaps = 46/449 (10%)

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISY 282
           +  + Q E  Q           D+R L    DLF  +    G   +   G  +   LIS+
Sbjct: 45  SCSDPQPEQPQPRTSPSTPSTTDYRALGTAQDLFTTSVYSPGSPLFLPNGTHVINRLISF 104

Query: 283 MRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCA------DDTIKDLRTFA 335
           +R +  +  + E+ TP +  + LW+ SGHW +Y+ +M+ V+        D    +  ++ 
Sbjct: 105 LRTQYLQYGFREVLTPTIYKRSLWEVSGHWQNYKDDMYEVRGRGATGEADGEAGEDESYG 164

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC 395
           LKPMNCPGH  +F     SYRELP+R A+F  ++RNE SGSL GL RVR F QDD H+FC
Sbjct: 165 LKPMNCPGHCLLFKSQNHSYRELPIRYADFSPLHRNEVSGSLSGLTRVRRFHQDDGHIFC 224

Query: 396 TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE-KRVGSDALWDDAENIMKGVLDT 454
             +Q+  E       +  +   FG     + LSTRPE   +GS  LWD AE  ++  LD 
Sbjct: 225 RPQQIKGEIASALGFVDMVMTTFGLGPYRLVLSTRPEKDFIGSLELWDSAEAQLREALDN 284

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH 514
                       +  G+GAFYGPK +  L+D  G+  Q  TIQ+D NLP RF   Y  + 
Sbjct: 285 SGR------EWAMNEGDGAFYGPKIDIQLQDQAGKYHQLSTIQLDMNLPQRFGLEYQVAE 338

Query: 515 SE---------KCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT--SS 563
            E         +  PV++HRA FGS+ERF+ ++IE + G  P WLSP Q I+ T+    +
Sbjct: 339 GEEDYDPATPGRATPVLVHRANFGSLERFLALLIEQYGGRWPFWLSPRQGIILTVNQDEA 398

Query: 564 AVEYAQEIANLLKSHHLSI---------------------ETDFRNETINYKIREHSIKK 602
            +  A E A  L      +                     + D  ++T+  KI+     K
Sbjct: 399 VLTQAHEAAAQLSGFRPLVAGQNDAKTPRPLSSVDSTFLIDVDTSSQTLGKKIQRAKQMK 458

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQK 631
             +I I G K+ ++ SI +   G   T+ 
Sbjct: 459 YNLIFILGPKDVADSSITVDVTGQLQTKT 487


>gi|312198148|ref|YP_004018209.1| threonyl-tRNA synthetase [Frankia sp. EuI1c]
 gi|311229484|gb|ADP82339.1| threonyl-tRNA synthetase [Frankia sp. EuI1c]
          Length = 411

 Score =  341 bits (874), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 128/405 (31%), Positives = 199/405 (49%), Gaps = 20/405 (4%)

Query: 243 KRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
             DHRKL RE+DLF      G+G+ +W   G  +  TL  Y+R  + +  Y+ + +P + 
Sbjct: 1   MHDHRKLGRELDLFDTDPLIGAGLPYWLPDGATVRHTLEEYIRAVERRAGYQHVYSPVLG 60

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            + L++ SGHW  Y  +MF                L+P  CP H  ++     SYRELP+
Sbjct: 61  KRELYEISGHWSHYSDDMFPPMDLG-----GEQVVLRPSLCPHHALIYRSRSHSYRELPL 115

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G +YR+E SG L GL RVR    +DAH+FCT EQ+ +E     +LI   Y+  G 
Sbjct: 116 RIAELGGMYRSELSGVLGGLTRVRAIQLNDAHIFCTLEQVADEARAALDLIRHAYEALGL 175

Query: 421 EKIMVKLSTRPE--KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
                +LS      K V +  LW  +  ++  VLD      +  +      GE AFYGPK
Sbjct: 176 TPSRYRLSLPGPGGKYVAAPDLWRRSVALLTEVLD------RSGLPYEAAEGEAAFYGPK 229

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +  + D  GR+    T+Q+DF+ P RF+  YV     +  PVM+HR++ GS+ER +  +
Sbjct: 230 IDVQVTDGAGRESTLSTVQIDFHQPERFDLRYVGPDGARHRPVMVHRSIIGSVERAVAHL 289

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIET--DFRNETINYKIR 596
           +E   G LP WL+PIQ ++  I++S +  A  +        L  +     R  ++  ++R
Sbjct: 290 LEQHGGALPAWLAPIQLVILPISASELPAAVALTRRCADLGLRAQVLGPDRG-SLGARVR 348

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
              +  +P   + G KEAS+  + +R             D +  +
Sbjct: 349 LARL--VPYQAVLGAKEASDGHVSLRLRDGHRLGPQPAGDVLARV 391


>gi|330935757|ref|XP_003305117.1| hypothetical protein PTT_17864 [Pyrenophora teres f. teres 0-1]
 gi|311318063|gb|EFQ86830.1| hypothetical protein PTT_17864 [Pyrenophora teres f. teres 0-1]
          Length = 528

 Score =  341 bits (874), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 149/444 (33%), Positives = 224/444 (50%), Gaps = 57/444 (12%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHR LA+  +LF  +    G       G  +FQ L S++R +     ++E+ TP +  + 
Sbjct: 58  DHRTLAQTHNLFITSPYSPGSPLILPNGAYVFQKLQSFLRAQYPQFGFQEVITPIIYKKS 117

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIK-------DLRTFALKPMNCPGHVAVFNHGLKSYR 356
           LW++SGHW++Y  +MF+V+    T +       +   F LKPMNCPGH  +F   +KSYR
Sbjct: 118 LWEKSGHWENYAEDMFSVQGRGTTAQIPEAEGGEDGEFGLKPMNCPGHCLLFRDEIKSYR 177

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +LPVRLA+F +++RNE SG+L GL RVR F QDDAH+FC  +Q+  E  +    +  +Y+
Sbjct: 178 DLPVRLADFSALHRNEISGALTGLTRVRRFHQDDAHIFCRPDQILAEIEQTLKFVAMVYR 237

Query: 417 DFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
            FG     + LSTRP+   +G+   WD AE  +   L+ I +         +  G+GAFY
Sbjct: 238 TFGLGPYKLLLSTRPKDSFIGTVEEWDRAEEQLTTALNNIGS------EWAINEGDGAFY 291

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS----------------HSEKCH 519
           GPK + ILKD+ G++ Q  TIQ+DF LP RF+  Y  S                      
Sbjct: 292 GPKIDIILKDSNGKEHQTATIQLDFQLPQRFDLQYQASPEELEAGSQTSMDAGLDQTLRR 351

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITS-----SAVEYAQEIANL 574
           PV++HRA++GSIERF+ ++IE++ G  P WLSP  A + ++         V   Q + + 
Sbjct: 352 PVIVHRAIYGSIERFMALLIEHYAGKYPFWLSPRPATILSLNDNAEVLEHVSRVQSVLSG 411

Query: 575 LKSHHL-------------------SIETDFRNETINYKIREHSIKKIPIIIICGDKEAS 615
           LK+                       ++ D  +  +  KI E   KK   II+ G  E  
Sbjct: 412 LKAADPPEQVSTSLPKPLPLSTIQLPVDVDTSSRPLAKKIAEARTKKYNHIIVVGLNEVQ 471

Query: 616 ERSIG--IRRFGSTTTQKVSLLDA 637
             S+   +    S     + L +A
Sbjct: 472 TGSVNMQVVNQPSPEATFLELQEA 495


>gi|256786722|ref|ZP_05525153.1| threonyl tRNA synthetase [Streptomyces lividans TK24]
 gi|289770616|ref|ZP_06529994.1| threonyl-tRNA synthetase [Streptomyces lividans TK24]
 gi|289700815|gb|EFD68244.1| threonyl-tRNA synthetase [Streptomyces lividans TK24]
          Length = 421

 Score =  340 bits (873), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 127/410 (30%), Positives = 198/410 (48%), Gaps = 23/410 (5%)

Query: 249 LAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQ 306
           L RE+ LF        G+ +W   G  +  TL  Y+R  + +  Y  + +P +  + L++
Sbjct: 23  LGRELALFDTDPLMGAGLPYWLPDGAVVRHTLEEYVREAERRAGYRHVYSPVLGKRELYE 82

Query: 307 QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFG 366
            SGHW+ YR +MF                L+P  CP H  V+    +SYRELP+R+AE G
Sbjct: 83  ISGHWEHYRDDMFPPMELG-----AEEVVLRPSLCPHHALVYRSRARSYRELPLRIAELG 137

Query: 367 SVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK 426
           ++YR+EPSG L GL RVR    +DAH+FCT +Q   E      LI   + D G      +
Sbjct: 138 AMYRSEPSGVLGGLSRVRAIHLNDAHIFCTPDQAAAEARAALGLIRRAHADLGIRAARHR 197

Query: 427 LSTRPE--KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           LS      K V    LW  A  +++  LD         +    + GE AFYGPK +  ++
Sbjct: 198 LSLPGPGGKYVADPELWRRATALLEEALD--------GLPYEAVEGEAAFYGPKIDVQIE 249

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           DA GR+    T+Q+DF+ P RF   Y+     +  PVM+HR+V GS+ER +  +IE   G
Sbjct: 250 DAAGRESTLSTVQIDFHQPERFGLRYLGPDGARHRPVMVHRSVIGSVERAVAHLIEAHGG 309

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIET-DFRNETINYKIREHSIKKI 603
             P WL+P+Q +V  +  +  E A  +        L  E  D    ++  ++R    +K+
Sbjct: 310 AFPAWLAPVQLVVLPVAGAQREAAYALVRQATDLGLRAEVADPERGSLGARVRAA--RKV 367

Query: 604 PIIIICGDKEASERS-IGIRRFGSTTTQKVSLLDAIPILTK--ESLPPDC 650
           P   + G +EA +   + +R        ++S  + +  +T   E+  P+ 
Sbjct: 368 PYQAVIGAREAQDGDLVDVRLRDGRRPGQLSGTELLHRITDRVEARGPEL 417


>gi|226295138|gb|EEH50558.1| threonyl-tRNA synthetase [Paracoccidioides brasiliensis Pb18]
          Length = 559

 Score =  340 bits (873), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 146/446 (32%), Positives = 218/446 (48%), Gaps = 53/446 (11%)

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISY 282
           T  +                  DHR +    DLF  +    G   +   G  I   L S+
Sbjct: 52  TTNDDTPHHDASSPQTPTLPPADHRVVGTAQDLFTTSVYSPGSPLFLPNGTHILNKLTSF 111

Query: 283 MRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD-------DTIKDLRTF 334
           +R +  +  + E+ TP +  + LW+ SGHW +Y+ +M+ V+            I +  ++
Sbjct: 112 LRAQYAQYGFREVLTPSIYKKSLWEVSGHWQNYKDDMYEVRGRGASGETAKGEIGEDESY 171

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
            LKPMNCPGH  +F     SYRELP+R A+F  ++RNE SGSL GL RVR F QDD H+F
Sbjct: 172 GLKPMNCPGHCLLFKSQNHSYRELPLRYADFSPLHRNEISGSLSGLTRVRRFHQDDGHIF 231

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLD 453
           C  +Q+ +E         ++   FGF K  + LSTRPE+  +GS  LWD AE  ++  L+
Sbjct: 232 CRPQQIGSEIESALRFTDTVMNTFGFNKYRLVLSTRPERDFIGSIELWDSAERQLRDALE 291

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS 513
               S +      +  G+GAFYGPK +  ++D+ G+  Q  TIQ+D NLP RF   Y  +
Sbjct: 292 KNGRSWE------LNEGDGAFYGPKIDMQVQDSDGKFHQLSTIQLDMNLPQRFELGYAVA 345

Query: 514 HSEKCH---------PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT--S 562
             E+ +         PV+IHRA+FGS+ERF  ++IEN+ G  P WLSP Q I+ T++   
Sbjct: 346 EGEEDYNPATPGKAMPVLIHRAIFGSLERFFALLIENYNGRWPFWLSPRQGIILTVSQDE 405

Query: 563 SAVEYAQEIANLL-----KSHH----------------------LSIETDFRNETINYKI 595
             ++ A++ A  +       +                         I+ D    ++  KI
Sbjct: 406 KLLQAAEDAATKMSGYPVHRNGELNSNSNSTAQPLKPISPAQTTFRIDVDTSARSLGKKI 465

Query: 596 REHSIKKIPIIIICGDKEASERSIGI 621
           RE    K  +I + G+K   + SI I
Sbjct: 466 REAKKMKYNLIFVLGEKNLGDGSIDI 491


>gi|225677700|gb|EEH15984.1| threonyl-tRNA synthetase [Paracoccidioides brasiliensis Pb03]
          Length = 559

 Score =  340 bits (873), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 146/446 (32%), Positives = 218/446 (48%), Gaps = 53/446 (11%)

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISY 282
           T  +                  DHR +    DLF  +    G   +   G  I   L S+
Sbjct: 52  TTNDDTPHHDASSPQTPTLPPADHRVVGTAQDLFTTSVYSPGSPLFLPNGTHILNKLTSF 111

Query: 283 MRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD-------DTIKDLRTF 334
           +R +  +  + E+ TP +  + LW+ SGHW +Y+ +M+ V+            I +  ++
Sbjct: 112 LRAQYAQYGFREVLTPSIYKKSLWEVSGHWQNYKDDMYEVRGRGASGETAKGEIGEDESY 171

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
            LKPMNCPGH  +F     SYRELP+R A+F  ++RNE SGSL GL RVR F QDD H+F
Sbjct: 172 GLKPMNCPGHCLLFKSQNHSYRELPLRYADFSPLHRNEISGSLSGLTRVRRFHQDDGHIF 231

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLD 453
           C  +Q+ +E         ++   FGF K  + LSTRPE+  +GS  LWD AE  ++  L+
Sbjct: 232 CRPQQIGSEIESALRFTDTVMNTFGFNKYRLVLSTRPERDFIGSIELWDSAERQLRDALE 291

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS 513
               S +      +  G+GAFYGPK +  ++D+ G+  Q  TIQ+D NLP RF   Y  +
Sbjct: 292 KNGRSWE------LNEGDGAFYGPKIDMQVQDSDGKFHQLSTIQLDMNLPQRFELGYAVA 345

Query: 514 HSEKCH---------PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT--S 562
             E+ +         PV+IHRA+FGS+ERF  ++IEN+ G  P WLSP Q I+ T++   
Sbjct: 346 EGEEDYNPATPGKAMPVLIHRAIFGSLERFFALLIENYNGRWPFWLSPRQGIILTVSQDE 405

Query: 563 SAVEYAQEIANLL-----KSHH----------------------LSIETDFRNETINYKI 595
             ++ A++ A  +       +                         I+ D    ++  KI
Sbjct: 406 KLLQAAEDAATKMSGYPVHRNGELNSNSNSTAQPLKPISPAQTTFRIDVDTSARSLGKKI 465

Query: 596 REHSIKKIPIIIICGDKEASERSIGI 621
           RE    K  +I + G+K   + SI I
Sbjct: 466 REAKKMKYNLIFVLGEKNLGDGSIDI 491


>gi|189197599|ref|XP_001935137.1| threonyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187981085|gb|EDU47711.1| threonyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 542

 Score =  340 bits (872), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 147/459 (32%), Positives = 227/459 (49%), Gaps = 55/459 (11%)

Query: 211 DSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHR 270
            + + +   +  ++                +   DHR LA+  +LF  +    G      
Sbjct: 38  SALQQLQHTVTVSSEPPTNAQLNTTTAAPPAPPTDHRTLAQTHNLFITSPYSPGSPLILP 97

Query: 271 KGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
            G  +FQ L S++R +     ++E+ TP +  + LW++SGHW++Y  +MF+V+    T +
Sbjct: 98  NGAYVFQKLQSFLRAQYPQFGFQEVITPIIYKKSLWEKSGHWENYAEDMFSVQGRGTTAQ 157

Query: 330 -------DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMR 382
                  +   F LKPMNCPGH  +F   +KSYR+LPVRLA+F +++RNE SG+L GL R
Sbjct: 158 IPEAEGGEDGEFGLKPMNCPGHCLLFRDEIKSYRDLPVRLADFSALHRNEISGALTGLTR 217

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP-EKRVGSDALW 441
           VR F QDDAH+FC  +Q+  E  +    +  +Y+ FG     + LSTRP +  +G+   W
Sbjct: 218 VRRFHQDDAHIFCRPDQILAEIEQTLKFVAMVYRTFGLGPYKLLLSTRPKDNFIGTVEEW 277

Query: 442 DDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFN 501
           D AE  +   L+ I +         +  G+GAFYGPK + ILKD+ G++ Q  TIQ+DF 
Sbjct: 278 DRAEEQLTTALNNIGS------EWAINEGDGAFYGPKIDIILKDSNGKEHQTATIQLDFQ 331

Query: 502 LPSRFNAFYVNS----------------HSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           LP RF+  Y  S                      PV++HRA++GSIERF+ ++IE++ G 
Sbjct: 332 LPQRFDLQYQASPEELEAGSQTSMDAGLDPTLRRPVIVHRAIYGSIERFMALLIEHYVGK 391

Query: 546 LPLWLSPIQAIVTTITS-----SAVEYAQEIANLLKSHHL-------------------S 581
            P WLSP  AI+ ++ +       V   Q + + LK+                       
Sbjct: 392 YPFWLSPRPAIILSLNNNAEVLEHVSRVQSVLSGLKAADPPSQVSTSSPKPLPLSTIQLP 451

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
           ++ D  +  +  KI E   KK   II+ G  E    S+ 
Sbjct: 452 VDVDTSSRPLAKKIAEARSKKYNHIIVVGGNEVQTGSVN 490


>gi|295664016|ref|XP_002792560.1| threonyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
 gi|226278674|gb|EEH34240.1| threonyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
          Length = 559

 Score =  340 bits (872), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 146/440 (33%), Positives = 217/440 (49%), Gaps = 53/440 (12%)

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI- 287
                           DHR +    DLF  +    G   +   G  I   L S++R +  
Sbjct: 58  PHHDASSPQTPTLRPADHRVVGTAQDLFTTSVYSPGSPLFLPNGTHILNKLTSFLRAQYA 117

Query: 288 KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCA-------DDTIKDLRTFALKPMN 340
           +  + E+ TP +  + LW+ SGHW +Y+ +M+ V+         +  I +  ++ LKPMN
Sbjct: 118 QYGFREVLTPSIYKKSLWEVSGHWQNYKDDMYEVRGRGASGETAEGEIGEDESYGLKPMN 177

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
           CPGH  +F     SYRELP+R A+F  ++RNE SGSL GL RVR F QDD H+FC  +Q+
Sbjct: 178 CPGHCLLFKSQNHSYRELPLRYADFSPLHRNEISGSLSGLTRVRRFHQDDGHIFCRPQQI 237

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDTIKNSS 459
            +E         ++   FGF K  + LSTRPE+  +GS  LWD AE  ++  L+    S 
Sbjct: 238 GSEIESALRFTDTVMNTFGFNKYRLVLSTRPERDFIGSIELWDSAERQLRDALEKNGRSW 297

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
           +      +  G+GAFYGPK +  ++D+ G+  Q  TIQ+D NLP RF   Y  +  E+ +
Sbjct: 298 E------LNEGDGAFYGPKIDMQVQDSDGKFHQLSTIQLDMNLPQRFELGYAVAEGEEDY 351

Query: 520 ---------PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT--SSAVEYA 568
                    PV+IHRA+FGS+ERF  ++IEN+ G  P WLSP Q I+ T++     V+ A
Sbjct: 352 NPATPGKAMPVLIHRAIFGSLERFFALLIENYNGRWPFWLSPRQGIILTVSQDEKLVQAA 411

Query: 569 QEIANLL-----KSHH----------------------LSIETDFRNETINYKIREHSIK 601
           ++ A  +       +                         I+ D    ++  KIRE    
Sbjct: 412 EDAATKISGYPVHRNGELNSNSNSTAQPLKPISPAQTTFRIDVDTSARSLGKKIREAKKM 471

Query: 602 KIPIIIICGDKEASERSIGI 621
           K  +I + G+K   + SI I
Sbjct: 472 KYNLIFVLGEKNLGDGSIDI 491


>gi|322696936|gb|EFY88721.1| putative threonine--tRNA ligase [Metarhizium acridum CQMa 102]
          Length = 491

 Score =  340 bits (871), Expect = 6e-91,   Method: Composition-based stats.
 Identities = 138/472 (29%), Positives = 226/472 (47%), Gaps = 67/472 (14%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
              QY    E+ E  DHRK+  + +LF  +    G   +   G +IF  LI ++R++   
Sbjct: 26  CRRQYSQKPEKREPPDHRKIGLQQELFITSAYSPGSPIFLPNGARIFNRLIDFIRKQYAR 85

Query: 290 -DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCA-------------------DDTIK 329
             ++E+ TP +  + LW +SGH ++Y  +M+ V                      +   +
Sbjct: 86  YGFQEVITPTIYKKALWAKSGHLENYADDMYTVTGNASTPGKDTGGCCGSDHGPVEPDSE 145

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
               + LKPMNCPGH  +F   ++SYRELPVR A+F  ++RNE SG+L GL RVR F QD
Sbjct: 146 ADNEYGLKPMNCPGHCLIFASKVRSYRELPVRYADFSPLHRNEVSGALSGLTRVRRFHQD 205

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYK--DFGFEKIMVKLSTRPEKRVGSDALWDDAENI 447
           D H+FC   Q+  E  K  + + ++Y     G    +   +   +  +G++  W+ AE+ 
Sbjct: 206 DGHIFCRPSQVEEEIKKTLDFVKAVYGVLRLGVGYRLALSTRPKDHFIGTEDEWNRAEDR 265

Query: 448 MKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFN 507
           +K  LD+        +   +   +GAFYGPK + ++KD+ G++ Q  TIQ+DF LP RF 
Sbjct: 266 LKTALDSSG------MEWSINEADGAFYGPKIDIVIKDSDGKEHQTATIQLDFQLPKRFA 319

Query: 508 AFYVNSHSEKC------------------HPVMIHRAVFGSIERFIGIMIENFKGNLPLW 549
             Y     E                     PVMIHRAV GS+ER + ++IE++ G  P W
Sbjct: 320 LEYQAPAPEYEARGETTNDPILLAEYGPVRPVMIHRAVLGSVERLMALLIESYDGKWPFW 379

Query: 550 LSPIQAIVTTITSS--AVEYAQEIANLL----KSHHLS------------IETDFRNETI 591
           L+P QAI+ T+ +S   +++A E+  +L    K    +            ++ D+   ++
Sbjct: 380 LNPRQAIILTVNTSRPVLDWADEVKEILLGLRKEAGQTSTEGPVNPTGLAVDVDYSARSL 439

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             KIRE        I++ G+++     + +   G      + + D +  L  
Sbjct: 440 GSKIREARTNGYSQILVVGEEDVKHGQVSL---GKERMSPMEMRDKMRKLAD 488


>gi|225561384|gb|EEH09664.1| threonyl-tRNA synthetase [Ajellomyces capsulatus G186AR]
          Length = 577

 Score =  339 bits (868), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 144/438 (32%), Positives = 215/438 (49%), Gaps = 52/438 (11%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-K 288
                          DHR +  E +LF  ++   G   +   G  I   L S++R +  +
Sbjct: 74  PHHGTYSQTHTLPPADHRVVGTEQELFVTSQYSPGSPLFLPNGTHILNKLTSFLRAQYTQ 133

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK--------DLRTFALKPMN 340
             + E+ TP +  + LW+ SGHW +Y+ +M+ V+  + T +        +  ++ LKPMN
Sbjct: 134 YGFLEVLTPSIYKKSLWKVSGHWQNYKDDMYEVRGRNATGEQTAETQIGEDESYGLKPMN 193

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
           CPGH  +F     SYRELP+R A+F  ++RNE SGSL GL RVR F QDD H+FC  +Q+
Sbjct: 194 CPGHCLLFKSQNHSYRELPLRYADFSPLHRNEISGSLSGLTRVRRFHQDDGHIFCRPQQI 253

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPE-KRVGSDALWDDAENIMKGVLDTIKNSS 459
            +E         ++ + FGFE   + LSTRPE   +GS  LWD AE  ++  L+    S 
Sbjct: 254 GSEIESALKFTDTVMRTFGFENYRLVLSTRPEKDFIGSVELWDSAERQLRDALEKSGRSW 313

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
           +      +  G+GAFYGPK +  ++D+ G+  Q  TIQ+D NLP RF   Y     E+ +
Sbjct: 314 E------LNHGDGAFYGPKIDMQIQDSDGKFHQLSTIQLDMNLPQRFELEYAVPEGEEDY 367

Query: 520 ---------PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSS------- 563
                    PV+IHRA+FGS+ERF  ++IEN+ G  P WLSP Q I+ T++         
Sbjct: 368 NPETPGKAVPVLIHRAIFGSLERFFALLIENYNGRWPFWLSPRQGIILTVSQDEKLLQAA 427

Query: 564 --AVEYAQEIANLLKSHH------------------LSIETDFRNETINYKIREHSIKKI 603
             A         +L S                      I+ D    ++  KIRE    K 
Sbjct: 428 DDAAAKMSGYQRVLSSSGDANSTTGPPKPLSPARTTFRIDLDTSARSLGKKIREAKKMKY 487

Query: 604 PIIIICGDKEASERSIGI 621
            +I + G+K   + S+ +
Sbjct: 488 NLIFVLGEKNLVDGSVDV 505


>gi|240274490|gb|EER38006.1| threonyl-tRNA synthetase [Ajellomyces capsulatus H143]
          Length = 550

 Score =  339 bits (868), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 144/438 (32%), Positives = 215/438 (49%), Gaps = 52/438 (11%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-K 288
                          DHR +  E +LF  ++   G   +   G  I   L S++R +  +
Sbjct: 75  PHHDTYSQTHTLPPADHRVVGTEQELFVTSQYSPGSPLFLPNGTHILNKLTSFLRAQYTQ 134

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK--------DLRTFALKPMN 340
             + E+ TP +  + LW+ SGHW +Y+ +M+ V+  + T +        +  ++ LKPMN
Sbjct: 135 YGFLEVLTPSIYKKSLWKVSGHWQNYKDDMYEVRGRNATGEQTAETQIGEDESYGLKPMN 194

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
           CPGH  +F     SYRELP+R A+F  ++RNE SGSL GL RVR F QDD H+FC  +Q+
Sbjct: 195 CPGHCLLFKSQNHSYRELPLRYADFSPLHRNEISGSLSGLTRVRRFHQDDGHIFCRPQQI 254

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPE-KRVGSDALWDDAENIMKGVLDTIKNSS 459
            +E         ++ + FGFE   + LSTRPE   +GS  LWD AE  ++  L+    S 
Sbjct: 255 GSEIESALKFTDTVMRTFGFENYRLVLSTRPEKDFIGSVELWDSAERQLRDALEKSGRSW 314

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
           +      +  G+GAFYGPK +  ++D+ G+  Q  TIQ+D NLP RF   Y     E+ +
Sbjct: 315 E------LNHGDGAFYGPKIDMQIQDSDGKFHQLSTIQLDMNLPQRFELEYAVPEGEEDY 368

Query: 520 ---------PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSS------- 563
                    PV+IHRA+FGS+ERF  ++IEN+ G  P WLSP Q I+ T++         
Sbjct: 369 NPETPGKAVPVLIHRAIFGSLERFFALLIENYNGRWPFWLSPRQGIILTVSQDEKLLQAA 428

Query: 564 --AVEYAQEIANLLKSHH------------------LSIETDFRNETINYKIREHSIKKI 603
             A         +L S                      I+ D    ++  KIRE    K 
Sbjct: 429 DDAAAKMSGYRRVLSSSGDANSTTGPPKPLSPARTTFRIDLDTSARSLGKKIREAKKMKY 488

Query: 604 PIIIICGDKEASERSIGI 621
            +I + G+K   + S+ +
Sbjct: 489 NLIFVLGEKNLVDGSVDV 506


>gi|325090828|gb|EGC44138.1| threonyl-tRNA synthetase [Ajellomyces capsulatus H88]
          Length = 578

 Score =  339 bits (868), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 146/452 (32%), Positives = 218/452 (48%), Gaps = 55/452 (12%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-K 288
                          DHR +  E +LF  ++   G   +   G  I   L S++R +  K
Sbjct: 75  PHHDTYSQTHTLPPADHRVVGTEQELFVTSQYSPGSPLFLPNGTHILNKLTSFLRAQYTK 134

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK--------DLRTFALKPMN 340
             + E+ TP +  + LW+ SGHW +Y+ +M+ V+  + T +        +  ++ LKPMN
Sbjct: 135 YGFLEVLTPSIYKKSLWKVSGHWQNYKDDMYEVRGRNATGEQTAETQIGEDESYGLKPMN 194

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
           CPGH  +F     SYRELP+R A+F  ++RNE SGSL GL RVR F QDD H+FC  +Q+
Sbjct: 195 CPGHCLLFKSQNHSYRELPLRYADFSPLHRNEISGSLSGLTRVRRFHQDDGHIFCRPQQI 254

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPE-KRVGSDALWDDAENIMKGVLDTIKNSS 459
            +E         ++ + FGFE   + LSTRPE   +GS  LWD AE  ++  L+    S 
Sbjct: 255 GSEIESALKFTDTVMRTFGFENYRLVLSTRPEKDFIGSVELWDSAERQLRDALEKSGRSW 314

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
           +      +  G+GAFYGPK +  ++D+ G+  Q  TIQ+D NLP RF   Y     E+ +
Sbjct: 315 E------LNHGDGAFYGPKIDMQIQDSDGKFHQLSTIQLDMNLPQRFELEYTVPEGEEDY 368

Query: 520 ---------PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSS------- 563
                    PV+IHRA+FGS+ERF  ++IEN+ G  P WLSP Q I+ T++         
Sbjct: 369 NPETPGKAVPVLIHRAIFGSLERFFALLIENYNGRWPFWLSPRQGIILTVSQDEKLLQAA 428

Query: 564 --AVEYAQEIANLLKSHH------------------LSIETDFRNETINYKIREHSIKKI 603
             A         +L S                      I+ D    ++  KIRE    K 
Sbjct: 429 DDAAAKMSGYRRVLSSSGDANSTTGPPKPLSPARTTFRIDLDTSARSLGKKIREAKKMKY 488

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
            +I + G+K   + S+ +          ++L 
Sbjct: 489 NLIFVLGEKNLVDGSVDV---DLGGQMMMALE 517


>gi|213407904|ref|XP_002174723.1| threonyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
 gi|212002770|gb|EEB08430.1| threonyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
          Length = 464

 Score =  338 bits (867), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 139/425 (32%), Positives = 218/425 (51%), Gaps = 31/425 (7%)

Query: 233 QYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DY 291
           ++    E+ +  DHR +A    LF I     G I++   G +I  ++ +++R + +   +
Sbjct: 27  KWTNSAEKIKFEDHRSIAARQKLFTINHLSPGSIYFLPHGTRIINSITNFLRTQYEVLGF 86

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD--DTIKDLRTFALKPMNCPGHVAVFN 349
           +E+ TP +    LW++SGH   Y+ NMF V      +  KD  +F LKPMNCP H  +F 
Sbjct: 87  KEVITPLIYKPELWKRSGHLSKYKENMFFVTSEHNSEDQKDSSSFGLKPMNCPAHCLLFA 146

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
              +SY+ELP+R A+F +++R E SG+L GL R+R F QDD H+FC ++Q++ E  K   
Sbjct: 147 EEERSYKELPLRFADFSTLHRYEASGALSGLTRLRSFHQDDGHIFCRRDQVYAEIQKDLL 206

Query: 410 LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL 469
            I   Y  F    +   LSTRP   +G    WD AE I++ VL     + + ++      
Sbjct: 207 FIKKFYALFHMNDLTFHLSTRPTDYIGEADQWDHAERILEKVLTESGMNWKRKV------ 260

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS------EKCHPVMI 523
           G+GAFYGPK +  ++D  GR  Q  TIQ+DF LP RF   +   H       +   PV+I
Sbjct: 261 GDGAFYGPKIDVHVRDTYGRSQQTATIQLDFQLPKRFQLRFRTEHGDNRLLQQYECPVLI 320

Query: 524 HRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTI--TSSAVEYAQEIANLLKSHH-- 579
           HRAV GS+ERF+GI+IE+  G  P W+SP  AI+ T+      + YA+E+   L  ++  
Sbjct: 321 HRAVLGSLERFLGILIEHLNGKWPFWISPRHAIILTLNQNQDVMAYAKEVQKTLSLNNRS 380

Query: 580 ------------LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGST 627
                         ++ D     +  ++ E         I+ G KE    ++ +   GS 
Sbjct: 381 FQAGLLPLNTFVFHVDLDCNAAPLGRRLNEARKLDYNYEIVIGTKETENHTLAVSERGSN 440

Query: 628 TTQKV 632
             +++
Sbjct: 441 ANRRM 445


>gi|145534462|ref|XP_001452975.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124420675|emb|CAK85578.1| unnamed protein product [Paramecium tetraurelia]
          Length = 1348

 Score =  338 bits (866), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 138/457 (30%), Positives = 232/457 (50%), Gaps = 43/457 (9%)

Query: 3   SDIKLTFPDGSIKNFPVH-ATGSDVAESISRSLAKKAVAVAI------------------ 43
           + I +T  DG          T   +A  IS+ LA+  VA  +                  
Sbjct: 58  TPITITLKDGKKIEGKKWVTTPLMIALGISKKLAENMVAAKVVYDNIFEKNFVDVDHEDQ 117

Query: 44  -----------NGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE 91
                      +  + DL+ P+  +  +E+++ +D     V  HS +HI+  A++ ++  
Sbjct: 118 QQQASTLNLKPDYLIWDLTRPLEGDCQLELLSFDDNNGKEVFWHSSSHILGSALEEVY-G 176

Query: 92  VQVAIGPIIEDGFYYDFD-KEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELF 150
             + IGP I+ GF+YD    +   + ++  +IEK   ++ A    F +  L+ ++  EL 
Sbjct: 177 CHLCIGPAIDGGFFYDCYIGDYKVTQNDYVKIEKAASDLAASKQEFQRAVLTKDECLEL- 235

Query: 151 ESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWR 209
                 +K +++   IP     T Y+ G   DLC GPH+ +T  VK F    K + AYW 
Sbjct: 236 -FGTNPFKRQLITNKIPEGAMTTAYKCGNLIDLCTGPHLPNTSYVKAFQVT-KNSAAYWL 293

Query: 210 GDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWH 269
           G +    L R+YG ++ +++ L +Y+   +E   RDHR + ++ +L+   +   G  F++
Sbjct: 294 GKNTNDDLQRVYGVSFPSKKLLDEYVKIQKELALRDHRNVGKKQNLYLFHQLSPGSAFFY 353

Query: 270 RKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTI 328
             G  I+ TL++++RR+     Y+E+ +P + +  LW+ SGH+D Y+ N+F +      +
Sbjct: 354 PSGAHIYNTLMNFLRRQYYIRGYQEVISPNIFNAQLWKISGHYDKYKENLFFI-----NM 408

Query: 329 KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQ 388
            +   + LKPMNCPGH  +F+    SYR+LPVR A+FG ++RNE  G+L GL RVR F Q
Sbjct: 409 GEEGEYGLKPMNCPGHCLMFDMIQHSYRDLPVRFADFGVLHRNEVHGALSGLTRVRRFQQ 468

Query: 389 DDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
           DDAH+FC  +Q+  E     + +  IY  FGFE  + 
Sbjct: 469 DDAHIFCRMDQIQEEIKSCLDFLSYIYSLFGFEFKLY 505


>gi|145230415|ref|XP_001389516.1| threonyl-tRNA synthetase [Aspergillus niger CBS 513.88]
 gi|134055633|emb|CAK37279.1| unnamed protein product [Aspergillus niger]
          Length = 526

 Score =  338 bits (866), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 143/423 (33%), Positives = 202/423 (47%), Gaps = 46/423 (10%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
           + S   D+R L    DLF  +    G   +   G  I   LI+++R +  +  + E+ TP
Sbjct: 55  QSSTPADYRALGTSQDLFTTSVYSPGSPLFLPNGTHIINKLITFLRTQYLQYGFREVLTP 114

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVK------CADDTIKDLRTFALKPMNCPGHVAVFNHG 351
            +  + LW+ SGHW +Y+ +M+ V+        D    +  ++ LKPMNCPGH  +F   
Sbjct: 115 TIYKRSLWEVSGHWQNYKDDMYEVRGRGATGDTDGEAGEDESYGLKPMNCPGHCLLFKSQ 174

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI 411
             SYRELP+R A+F  ++RNE SGSL GL RVR F QDD H+FC  +Q+  E       +
Sbjct: 175 THSYRELPIRYADFSPLHRNEVSGSLSGLTRVRRFHQDDGHIFCRPQQIKGEIASALGFV 234

Query: 412 ISIYKDFGFEKIMVKLSTRPE-KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
             +   FG     + LSTRPE   +GS  LW+ AE  ++  LD             +  G
Sbjct: 235 DLVMTTFGLGPYRLVLSTRPEKDFIGSLELWNSAEAQLREALDNTGR------EWAMNEG 288

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE---------KCHPV 521
           +GAFYGPK +  L+D  G+  Q  TIQ+D NLP RF   Y  +  E         K  PV
Sbjct: 289 DGAFYGPKIDIQLQDKAGKYHQLSTIQLDMNLPQRFGLEYQVAEGEEDYNPETPGKATPV 348

Query: 522 MIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLS 581
           MIHRA FGS+ERF+ ++IE + G  P WLSP Q IV T+        Q      K     
Sbjct: 349 MIHRANFGSLERFLALLIEEYAGRWPFWLSPRQGIVLTVNQDEAVVQQAHEAAAKISGFR 408

Query: 582 I-----------------------ETDFRNETINYKIREHSIKKIPIIIICGDKEASERS 618
                                   + D   +++N KI+     K  +I I G K+ +   
Sbjct: 409 ALQPGQMGTDAPQPISSVDSTFLIDVDSSGQSLNKKIQRAKHMKYNLIFILGPKDVAASR 468

Query: 619 IGI 621
           I +
Sbjct: 469 ITV 471


>gi|154282499|ref|XP_001542045.1| hypothetical protein HCAG_02216 [Ajellomyces capsulatus NAm1]
 gi|150410225|gb|EDN05613.1| hypothetical protein HCAG_02216 [Ajellomyces capsulatus NAm1]
          Length = 582

 Score =  337 bits (865), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 144/438 (32%), Positives = 215/438 (49%), Gaps = 52/438 (11%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-K 288
                          DHR +  E +LF  ++   G   +   G  I   L S++R +  +
Sbjct: 79  PHHGTYSHTHTLPPADHRVVGTEQELFVTSQYSPGSPLFLPNGTHILNKLTSFLRAQYTQ 138

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK--------DLRTFALKPMN 340
             + E+ TP +  + LW+ SGHW +Y+ +M+ V+  + T +        +  ++ LKPMN
Sbjct: 139 YGFLEVLTPSIYKKSLWKVSGHWQNYKDDMYEVRGRNATGEQTAETQIGEDESYGLKPMN 198

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
           CPGH  +F     SYRELP+R A+F  ++RNE SGSL GL RVR F QDD H+FC  +Q+
Sbjct: 199 CPGHCLLFKSQNHSYRELPLRYADFSPLHRNEISGSLSGLTRVRRFHQDDGHIFCRPQQI 258

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPE-KRVGSDALWDDAENIMKGVLDTIKNSS 459
            +E         ++ + FGFE   + LSTRPE   +GS  LWD AE  ++  L+    S 
Sbjct: 259 GSEIESALKFTDTVMRTFGFENYRLVLSTRPEKDFIGSVELWDSAERQLRDALEKSGRSW 318

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
           +      +  G+GAFYGPK +  ++D+ G+  Q  TIQ+D NLP RF   Y     E+ +
Sbjct: 319 E------LNHGDGAFYGPKIDMQIQDSDGKFHQLSTIQLDMNLPQRFELEYAVPEGEEDY 372

Query: 520 ---------PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSS------- 563
                    PV+IHRA+FGS+ERF  ++IEN+ G  P WLSP Q I+ T++         
Sbjct: 373 DPETPGRAVPVLIHRAIFGSLERFFALLIENYNGRWPFWLSPRQGIILTVSQDEKLLQAA 432

Query: 564 --AVEYAQEIANLLKSHH------------------LSIETDFRNETINYKIREHSIKKI 603
             A         +L S                      I+ D    ++  KIRE    K 
Sbjct: 433 DDAAAKMSGYWRVLSSSGDANSTPAPPKPLSPARTTFRIDLDTSARSLGKKIREAKKMKY 492

Query: 604 PIIIICGDKEASERSIGI 621
            +I + G+K   + S+ +
Sbjct: 493 NLIFVLGEKNLVDGSVDV 510


>gi|226304250|ref|YP_002764208.1| threonyl-tRNA synthetase [Rhodococcus erythropolis PR4]
 gi|226183365|dbj|BAH31469.1| putative threonyl-tRNA synthetase [Rhodococcus erythropolis PR4]
          Length = 406

 Score =  337 bits (865), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 130/412 (31%), Positives = 204/412 (49%), Gaps = 20/412 (4%)

Query: 245 DHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           DHR+L R+++ F      G+G+  W   G  I   L  +   +      + + TP +  +
Sbjct: 4   DHRELGRDLEFFATTPIVGAGLPLWLPDGAVIRNELEKFAAEQAARSGCQGVYTPVMAKK 63

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            L+++SGHW  +  +MF             +F L+P NCP H  VF    +SYRELP R+
Sbjct: 64  ELYERSGHWSKFSEDMFPEMKIG-----GESFLLRPANCPHHAQVFAARGRSYRELPFRV 118

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            E GS++R+E SG L GL RVR    DDAHVFC++EQ+  E +   + I   Y   G  +
Sbjct: 119 RELGSMFRSELSGVLSGLSRVRQINLDDAHVFCSREQVQAEVIVALDAIERCYSTLGIAE 178

Query: 423 IMVKLSTR--PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
              +LS R    + +G+D  W DAE+ ++G L+         I      GE AFYGPK +
Sbjct: 179 RKYRLSIRGGEGQYLGTDEQWADAEDHLRGALNA------RSIEYVEAKGEAAFYGPKID 232

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
             ++DA GR+    T+Q+DFN P RF+  Y      K  PVMIHR + GS+ER   ++IE
Sbjct: 233 VQVRDAHGREETLSTVQLDFNQPERFDLEYTAEDGSKVRPVMIHRGLLGSMERMTALLIE 292

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
            F+G +P WL+P Q  +  +       A+ +   L++  + +     + ++  +IRE   
Sbjct: 293 RFEGRMPPWLAPNQVSILPVGDRHQVEAERLRADLEARDVRVAI-APDGSLGRRIREART 351

Query: 601 KKIPIIIICGDKEASERSIGIRR--FGSTTTQKVS--LLDAIPILTKESLPP 648
            + P I + GD E    ++ +     G       S  +   +  + + +L P
Sbjct: 352 HRDPYIAVIGDNEVHGGTVDVLVPARGGRVVVDASVFVAQVVSGIKERALLP 403


>gi|322707504|gb|EFY99082.1| threonyl-tRNA synthetase [Metarhizium anisopliae ARSEF 23]
          Length = 563

 Score =  337 bits (865), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 141/472 (29%), Positives = 228/472 (48%), Gaps = 67/472 (14%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
              QY    E+ E  DHRK+  + +LF  +    G   +   G +IF  LI ++R++   
Sbjct: 98  CRRQYSQKPEKREPPDHRKIGLQQELFITSAYSPGSPIFLPNGARIFNRLIDFIRKQYAR 157

Query: 290 -DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKC-------------------ADDTIK 329
             ++E+ TP +  + LW +SGH ++Y  +M+ V                     A+  ++
Sbjct: 158 YGFQEVITPTIYKKALWAKSGHLENYADDMYTVTGNTSTPDKDGGGCCGGDHGPAEPDLE 217

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
               + LKPMNCPGH  +F   + SYRELPVR A+F  ++RNE SG+L GL RVR F QD
Sbjct: 218 ADNEYGLKPMNCPGHCLIFASRVHSYRELPVRYADFSPLHRNEISGALSGLTRVRRFHQD 277

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYK--DFGFEKIMVKLSTRPEKRVGSDALWDDAENI 447
           D H+FC   Q+  E  K  + +  +Y     G    +   +   +  +G++  W+ AE+ 
Sbjct: 278 DGHIFCRPSQVEEEIKKTLDFVKVVYGVLRLGVGYRLALSTRPKDHFIGTEDEWNRAEDR 337

Query: 448 MKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFN 507
           +K  LD+        +   +  G+GAFYGPK + ++KD+ G++ Q  TIQ+DF LP RF 
Sbjct: 338 LKMALDSSG------MEWSINEGDGAFYGPKIDIVIKDSDGKEHQTATIQLDFQLPKRFA 391

Query: 508 AFYVNSHSEKC------------------HPVMIHRAVFGSIERFIGIMIENFKGNLPLW 549
             Y     E                     PVMIHRAV GS+ER + ++IE++ G  P W
Sbjct: 392 LEYQAPAPEYEARGETTNDPVLLAEYGPVRPVMIHRAVLGSVERLMALLIESYDGKWPFW 451

Query: 550 LSPIQAIVTTITSS--AVEYAQEIANLL----KSHHLS------------IETDFRNETI 591
           L+P QAI+ T+ +S   +++A E+  +L    K    +            ++ D+   ++
Sbjct: 452 LNPRQAIILTVNTSRPVLDWADEVKEILLGLKKEAGQTSTEGPVNPTGLAVDVDYSARSL 511

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             KIRE  I     I++ G+++     + +   G      + + D +  L  
Sbjct: 512 GSKIREARINGYSQILVVGEEDVKHGQVSL---GKERMSPMEMRDKMCELAD 560


>gi|86742091|ref|YP_482491.1| threonyl-tRNA synthetase [Frankia sp. CcI3]
 gi|86568953|gb|ABD12762.1| threonyl-tRNA synthetase [Frankia sp. CcI3]
          Length = 438

 Score =  337 bits (864), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 125/424 (29%), Positives = 195/424 (45%), Gaps = 33/424 (7%)

Query: 243 KRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
             DHRKL RE++LF      GSG+ +W   G  +  TL  Y+R  + +  Y  + +P + 
Sbjct: 1   MYDHRKLGRELELFDTDPLIGSGLPYWLPAGAVVRHTLEEYIRGVERRAGYRHVYSPVLG 60

Query: 301 DQHLWQQSGHWDSYRANMFAVKCA--------------------DDTIKDLRTFALKPMN 340
            + L++ SGHW  YR +MF                                    L+P  
Sbjct: 61  KRELYEISGHWSHYRDDMFPPMDLSGERLGGERLGGERLGGERLGGERLGGEQMVLRPSL 120

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
           CP H  ++     SYR+LP+R+AE G +YR+E SG L GL RVR    +DAH+FC  EQ+
Sbjct: 121 CPHHALIYRSRAHSYRDLPLRMAELGGMYRSELSGVLGGLTRVRAIQLNDAHIFCAPEQV 180

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPE--KRVGSDALWDDAENIMKGVLDTIKNS 458
            +E      LI   Y   G      +LS      K VG   +W  +  ++  VLD     
Sbjct: 181 ADEARAALELIREAYGALGVSPARYRLSLPGPGGKYVGDPGMWRRSAALLTEVLDAAG-- 238

Query: 459 SQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC 518
               +    + GE AFYGPK +  + D+ GR+    T+Q+DF+ P RF+  Y        
Sbjct: 239 ----VAYEAVEGEAAFYGPKIDVQIVDSAGREATLSTVQIDFHQPERFDLRYAGPDGAMR 294

Query: 519 HPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSH 578
            PVM+HR+V GS+ER +  +IE+  G  P WL+P+Q +   I+ + V +A  +       
Sbjct: 295 RPVMVHRSVIGSVERAVAHLIESHGGAFPPWLAPVQLVALPISDAEVPHALALVRQAADR 354

Query: 579 HLSIE-TDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
            L  E    +  T+  ++R   +  +P   I G +EA++  + +R       +     + 
Sbjct: 355 GLRAEAAGPQRGTLGARVRAARL--VPYQAIIGAREAADERVSLRLRDGRRLEARPAAEV 412

Query: 638 IPIL 641
           +  +
Sbjct: 413 LAGI 416


>gi|117164481|emb|CAJ88027.1| putative threonyl tRNA synthetase [Streptomyces ambofaciens ATCC
           23877]
          Length = 411

 Score =  337 bits (863), Expect = 5e-90,   Method: Composition-based stats.
 Identities = 124/409 (30%), Positives = 196/409 (47%), Gaps = 20/409 (4%)

Query: 240 ESEKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTP 297
            + + DHRKL RE+ LF      G+G+ +W   G  +  +L  Y+R  + +  Y  + +P
Sbjct: 1   MATQHDHRKLGRELGLFDTDPLIGAGLPYWLPDGAAVRYSLEEYIRAAERRAGYRHVYSP 60

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +  + L++ SGHW  Y  +MF                L+P  CP H  ++     SYRE
Sbjct: 61  VLGKRELYEISGHWAHYSDDMFPPMDLG-----GEQVVLRPSLCPHHAVIYRSRSHSYRE 115

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP+R+AE G +YR+E SG L GL RVR    +DAH+FCT +Q+  E      +I   Y+ 
Sbjct: 116 LPLRMAELGGMYRSELSGVLGGLTRVRAIQLNDAHIFCTLDQVAGEAQAALEMIRQAYEA 175

Query: 418 FGFEKIMVKLSTRPE--KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
            G      +LS      K V     W  +  ++  VLD      +  +      GE AFY
Sbjct: 176 LGITPTRYRLSLPGPGAKYVADPEKWQRSTALLTDVLD------RSGLPYEAAQGEAAFY 229

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  + D  GR+    T+QVDF+ P RF+  Y+ +   K  PVM+HR++ GS+ER +
Sbjct: 230 GPKIDVQVTDGAGRESTLSTVQVDFHQPERFDLHYIGADGGKHRPVMVHRSIIGSVERAV 289

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET--INY 593
             +IE   G  P WL+P Q +V  I+ +    A  +A       L  E     E   +  
Sbjct: 290 AHLIEQHGGAFPAWLAPTQLVVLPISDTEWPNAAALAERAAGLGLRAEI-AGPERGSLGA 348

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           ++RE  +  +P   + G +EA++  + +R           + + +P ++
Sbjct: 349 RVREARL--VPYQAVIGAREAADDHVALRLRDGRRIDPQPVGEVLPHIS 395


>gi|300120318|emb|CBK19872.2| unnamed protein product [Blastocystis hominis]
          Length = 414

 Score =  337 bits (863), Expect = 5e-90,   Method: Composition-based stats.
 Identities = 144/421 (34%), Positives = 233/421 (55%), Gaps = 24/421 (5%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTP 297
           + E+++RDHR + +++++     +  G +F+  +G   +  L+ Y++     +YEEI +P
Sbjct: 1   MREAKERDHRVVGKKLEMLLFDGNSPGNVFFLDRGLFTYSRLVEYLKSHYLQEYEEIASP 60

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR- 356
            +   +LW+ SGH+D YR+NMF V   DD         LKPMNCP H  V+ H  +SYR 
Sbjct: 61  LLFKSNLWKISGHYDHYRSNMFQVNTRDDKD---EETFLKPMNCPSHCIVYAHKGRSYRS 117

Query: 357 ---------ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
                    +LP+R AEF +++R E SG+L GL R+  F QDD H+FC K+Q+  E   +
Sbjct: 118 SLWLAVTSSDLPIRYAEFTAIHRQENSGALGGLTRLNMFHQDDGHIFCRKDQISQEISTL 177

Query: 408 HNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGV 467
            + I S+Y   GF      LST+P   VG    W D E  ++ +L+ +       ++  V
Sbjct: 178 LSTIKSLYSKLGF-DFSFVLSTQPSDSVGQSDEWKDTEAQLRSILEKLG------LDYSV 230

Query: 468 LLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAV 527
             G+GAFY PK + +++D+I R  QCGTIQ+D  LP +F   + N+  E   PV+IHRA+
Sbjct: 231 EEGDGAFYAPKIDVLIQDSIRRYHQCGTIQLDVQLPKKFGLKFRNADGEFETPVLIHRAI 290

Query: 528 FGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITS-SAVEYAQEIANLL---KSHHLSIE 583
           +GS+ERF+G+ IE+  G  PL  SP Q  +  ++  S +E+ +E+A  L    S  L ++
Sbjct: 291 YGSLERFLGVYIEHCNGRFPLCFSPYQIALLPVSDPSHLEFCREVAEQLTNGNSDKLRVD 350

Query: 584 TDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
                 ++  +IRE ++K    ++  G++E   +++ +R  GS   Q +S+      L  
Sbjct: 351 ERMMGRSLGKRIRECTMKHYNYMVTVGEEEVKSKTLSVRSRGSKDIQHISVPSFRENLLA 410

Query: 644 E 644
           E
Sbjct: 411 E 411


>gi|239612679|gb|EEQ89666.1| threonyl-tRNA synthetase [Ajellomyces dermatitidis ER-3]
 gi|327351753|gb|EGE80610.1| threonyl-tRNA synthetase [Ajellomyces dermatitidis ATCC 18188]
          Length = 569

 Score =  336 bits (862), Expect = 6e-90,   Method: Composition-based stats.
 Identities = 140/439 (31%), Positives = 214/439 (48%), Gaps = 53/439 (12%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-K 288
                          DHR +    +LF  +    G   +   G  I   L S++R +  +
Sbjct: 67  PHRDTYLQTPAVSPADHRVVGTAQELFTTSPYSPGSPLFLPNGTHILNKLTSFLRAQYIQ 126

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK--------DLRTFALKPMN 340
             + E+ TP +  + LW+ SGHW +Y+ +M+ V+    T +        +  ++ LKPMN
Sbjct: 127 YGFREVLTPSIYKKSLWEVSGHWQNYKDDMYEVRGRGATGEQTAETEIGEDESYGLKPMN 186

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
           CPGH  +F     SYRELP+R A+F  ++RNE SGSL GL RVR F QDD H+FC  +Q+
Sbjct: 187 CPGHCLLFKSQNHSYRELPLRYADFSPLHRNEISGSLSGLTRVRRFHQDDGHIFCRPQQI 246

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPE-KRVGSDALWDDAENIMKGVLDTIKNSS 459
            +E         ++   FGFE   + LSTRPE   +GS  LW+ AE  ++  L+    S 
Sbjct: 247 GSEIESALKFTDTVMNIFGFENYRLVLSTRPEADFIGSLELWESAERQLRNALEKSGRSW 306

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
           +      +  G+GAFYGPK +  ++D+ G+  Q  TIQ+D NLP RF   Y  +  E+ +
Sbjct: 307 E------LNEGDGAFYGPKIDMQVQDSDGKFHQLSTIQLDMNLPQRFELEYAVAEGEEDY 360

Query: 520 ---------PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT--SSAVEYA 568
                    PV+IHRA+FGS+ERF  ++IE + G  P WLSP Q I+ T++     +  A
Sbjct: 361 NPETPGRAVPVLIHRAIFGSLERFFALLIEKYNGRWPFWLSPRQGIILTVSQDEKLLRAA 420

Query: 569 QEIANLLKSHHLS--------------------------IETDFRNETINYKIREHSIKK 602
           ++ A  +  +                             I+ D     +  KIRE    K
Sbjct: 421 EDAAAKMSGYQAHSSSEDANSTTTTGPLKPLSPARTTFSIDLDTSARPLGKKIREAKEMK 480

Query: 603 IPIIIICGDKEASERSIGI 621
             +I + G+K  ++ S+ +
Sbjct: 481 YNLIFVLGEKNLADGSVDV 499


>gi|261191482|ref|XP_002622149.1| threonyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
 gi|239589915|gb|EEQ72558.1| threonyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
          Length = 569

 Score =  336 bits (862), Expect = 6e-90,   Method: Composition-based stats.
 Identities = 140/439 (31%), Positives = 214/439 (48%), Gaps = 53/439 (12%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-K 288
                          DHR +    +LF  +    G   +   G  I   L S++R +  +
Sbjct: 67  PHRDTYLQTPAVSPADHRVVGTAQELFTTSPYSPGSPLFLPNGTHILNKLTSFLRAQYIQ 126

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK--------DLRTFALKPMN 340
             + E+ TP +  + LW+ SGHW +Y+ +M+ V+    T +        +  ++ LKPMN
Sbjct: 127 YGFREVLTPSIYKKSLWEVSGHWQNYKDDMYEVRGRGATGEQTAGTEIGEDESYGLKPMN 186

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
           CPGH  +F     SYRELP+R A+F  ++RNE SGSL GL RVR F QDD H+FC  +Q+
Sbjct: 187 CPGHCLLFKSQNHSYRELPLRYADFSPLHRNEISGSLSGLTRVRRFHQDDGHIFCRPQQI 246

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPE-KRVGSDALWDDAENIMKGVLDTIKNSS 459
            +E         ++   FGFE   + LSTRPE   +GS  LW+ AE  ++  L+    S 
Sbjct: 247 GSEIESALKFTDTVMNIFGFENYRLVLSTRPEADFIGSLELWESAERQLRNALEKSGRSW 306

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
           +      +  G+GAFYGPK +  ++D+ G+  Q  TIQ+D NLP RF   Y  +  E+ +
Sbjct: 307 E------LNEGDGAFYGPKIDMQVQDSDGKFHQLSTIQLDMNLPQRFELEYAVAEGEEDY 360

Query: 520 ---------PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT--SSAVEYA 568
                    PV+IHRA+FGS+ERF  ++IE + G  P WLSP Q I+ T++     +  A
Sbjct: 361 NPETPGRAVPVLIHRAIFGSLERFFALLIEKYNGRWPFWLSPRQGIILTVSQDEKLLRAA 420

Query: 569 QEIANLLKSHHLS--------------------------IETDFRNETINYKIREHSIKK 602
           ++ A  +  +                             I+ D     +  KIRE    K
Sbjct: 421 EDAAAKMSGYQAHSSSEDANSTTTTGPLKPLSPARTTFSIDLDTSARPLGKKIREAKEMK 480

Query: 603 IPIIIICGDKEASERSIGI 621
             +I + G+K  ++ S+ +
Sbjct: 481 YNLIFVLGEKNLADGSVDV 499


>gi|67517326|ref|XP_658540.1| hypothetical protein AN0936.2 [Aspergillus nidulans FGSC A4]
 gi|40746809|gb|EAA65965.1| hypothetical protein AN0936.2 [Aspergillus nidulans FGSC A4]
 gi|259488776|tpe|CBF88493.1| TPA: threonyl-tRNA synthetase (AFU_orthologue; AFUA_1G16210)
           [Aspergillus nidulans FGSC A4]
          Length = 523

 Score =  336 bits (861), Expect = 7e-90,   Method: Composition-based stats.
 Identities = 147/434 (33%), Positives = 215/434 (49%), Gaps = 45/434 (10%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           + Q+  Q     + +   D+R L    DLF  +    G   +   G  I   LIS++R +
Sbjct: 41  SDQQAQQQPSENQAASSADYRALGTAQDLFTTSIYSPGSPLFLPNGTHIINKLISFLRTQ 100

Query: 287 I-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK------CADDTIKDLRTFALKPM 339
             +  + E+ TP +  Q LW+ SGHW +Y+ +M+ V+        +    +  ++ LKPM
Sbjct: 101 YLQYGFREVLTPTIYKQSLWEVSGHWQNYKDDMYEVRGRGAMGDTEGEAGENESYGLKPM 160

Query: 340 NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQ 399
           NCPGH  +F     SYRELP+R A+F  ++RNE SGSL GL RVR F QDD H+FC  +Q
Sbjct: 161 NCPGHCLLFKSQNHSYRELPIRYADFSPLHRNEISGSLSGLTRVRRFHQDDGHIFCRPQQ 220

Query: 400 MFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE-KRVGSDALWDDAENIMKGVLDTIKNS 458
           +  E       +  +   FG     + LSTRPE   +G   LWD AE  ++  LD     
Sbjct: 221 IKGEIKSALGFVDLVMTTFGLGPYRLVLSTRPEKDFIGDLQLWDSAEAQLREALDQTGK- 279

Query: 459 SQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE-- 516
                N  +  G+GAFYGPK +  L+D  G+  Q  TIQ+D NLP RF   Y  +  E  
Sbjct: 280 -----NWAINEGDGAFYGPKIDIQLQDQAGKYHQLSTIQLDMNLPRRFELEYQVAEGEED 334

Query: 517 -------KCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT--SSAVEY 567
                  +  PV+IHRA FGS+ERF+ ++IE + G  P WLSP Q I+ T+    + V+ 
Sbjct: 335 YNPATPGRATPVLIHRANFGSLERFLALLIEQYSGRWPFWLSPRQGIILTVNQDDAVVKQ 394

Query: 568 AQEIANL---LKSHHLSI-----------------ETDFRNETINYKIREHSIKKIPIII 607
           A E A      K+   +                  + D  ++T++ KI+     K  +I 
Sbjct: 395 AHEAAAQISGFKALDQNAADGIPQPLSATDSTFLIDVDTSSQTLSKKIQRAKQMKYNLIF 454

Query: 608 ICGDKEASERSIGI 621
           I G K+ +E  I +
Sbjct: 455 ILGPKDLAEGRISV 468


>gi|207723063|ref|YP_002253475.1| threonyl-trna synthetase protein [Ralstonia solanacearum MolK2]
 gi|206588254|emb|CAQ18812.1| threonyl-trna synthetase protein [Ralstonia solanacearum MolK2]
          Length = 344

 Score =  336 bits (861), Expect = 8e-90,   Method: Composition-based stats.
 Identities = 174/347 (50%), Positives = 237/347 (68%), Gaps = 9/347 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEII 62
            I +T PDGS + FP   T ++VA+SI   LAK A+A  I+G + D S  + +   + I+
Sbjct: 1   MIAITLPDGSRREFPGPVTVAEVAQSIGAGLAKAALAGRIDGHLVDTSFKIEQSVDLAIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +D   L VIRHS AH++A AV+ + P+ QV IGP+IE+GFYYDF  ++PF+ ++L  I
Sbjct: 61  TDKDADGLDVIRHSTAHLLAYAVKELHPDAQVTIGPVIENGFYYDFAYKRPFTPEDLVAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EKKM E+  +D    ++     +A +LFE   E YK EI+ SIP  + + LYR+G + DL
Sbjct: 121 EKKMAELAKKDEKVTREVWRRNEAVKLFEGMGEKYKAEIIASIPEDQEIGLYREGSFVDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV STG++K F KLMKVAGAYWRGDSN  ML RIYGTAW  +++   YL+ LEE+E
Sbjct: 181 CRGPHVPSTGKLKVF-KLMKVAGAYWRGDSNNEMLQRIYGTAWAKKEDQEAYLHMLEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLD 301
           KRDHRKL +++DLFH+ E+  G++FWH KGW+I+Q +  YMR R     Y E+ TPQV+D
Sbjct: 240 KRDHRKLGKQLDLFHLQEEAPGMVFWHPKGWQIWQAVEQYMRGRLAGAGYSEVRTPQVMD 299

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
           + LW+ SGHW +Y+ NMF       T  + R +A+KPMNCPGHV +F
Sbjct: 300 RTLWEHSGHWQNYKENMFV------TESEKREYAIKPMNCPGHVQIF 340


>gi|302924192|ref|XP_003053833.1| hypothetical protein NECHADRAFT_31483 [Nectria haematococca mpVI
           77-13-4]
 gi|256734774|gb|EEU48120.1| hypothetical protein NECHADRAFT_31483 [Nectria haematococca mpVI
           77-13-4]
          Length = 485

 Score =  336 bits (861), Expect = 8e-90,   Method: Composition-based stats.
 Identities = 143/471 (30%), Positives = 226/471 (47%), Gaps = 63/471 (13%)

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISY 282
           T          Y    E+ E  DHRKL  + +LF  +    G   +   G +IF  L+ +
Sbjct: 20  TCPTCLSRRRLYSQKPEKREPPDHRKLGLQQELFISSIYSPGSPIFLPNGARIFNRLVDF 79

Query: 283 MRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADD--------------- 326
           +R++     +EE+ TP +  + LW +SGH ++Y  +M+AV+   +               
Sbjct: 80  LRKQYVRYGFEEVITPTIYKKSLWAKSGHLENYADDMYAVRGNTEQPPAEHDGCCGSHPE 139

Query: 327 ----TIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMR 382
                 ++   + LKPMNCPGH  +F     SYR+LP+R A+F  ++RNE SG+L GL R
Sbjct: 140 NLKPEDEEEGDYGLKPMNCPGHCLIFASKRHSYRDLPIRYADFSPLHRNEISGALSGLTR 199

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK--DFGFEKIMVKLSTRPEKRVGSDAL 440
           VR F QDD H+FC   Q+  E  K  + +  +Y    FG    +   +   +  +G++  
Sbjct: 200 VRRFHQDDGHIFCRPCQVEEEIKKTLDFVKVVYTVLRFGASYRLALSTRPKDHYIGTEEE 259

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDF 500
           W  AEN +K  LD         +  GV  G+GAFYGPK + +L D+ G++ Q  TIQ+DF
Sbjct: 260 WAQAENALKRALDASG------MEWGVKEGDGAFYGPKIDIVLTDSDGKEHQTATIQLDF 313

Query: 501 NLPSRFNAFYVNSHSEKC------------------HPVMIHRAVFGSIERFIGIMIENF 542
            LP RF   Y     E                     PVMIHRAV GS+ER + ++IE +
Sbjct: 314 QLPKRFELEYQAPAPEYEARGETTEDPALLAEYGPVRPVMIHRAVLGSVERLMALLIEKY 373

Query: 543 KGNLPLWLSPIQAIVTTITSS--AVEYAQEIANLLKSH---------HLSIETDFRNETI 591
            G  P WL+P QAI+ T+ +S   +++A+ + ++L  H          L+++ D     +
Sbjct: 374 DGKWPFWLNPRQAIILTVNTSTPVLDWAEHVRDVLVGHNKQNVFRPTGLAVDVDTTARPL 433

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             KI+E        I++ GD++   + + +        +++S  D    L 
Sbjct: 434 GAKIKEARTNGYGQILVVGDEDVKNKQVAL------GRERISPEDLRERLK 478


>gi|218677881|ref|ZP_03525778.1| threonyl-tRNA synthetase [Rhizobium etli CIAT 894]
          Length = 340

 Score =  335 bits (859), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 230/340 (67%), Positives = 278/340 (81%), Gaps = 6/340 (1%)

Query: 114 FSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTL 173
           F+ D+L +IEKKM+EIIAR++PF KQ  S EKA+++F +K E YKVE++++IP  +++ +
Sbjct: 1   FTPDDLPKIEKKMKEIIARNAPFTKQIWSREKAKDVFAAKGEQYKVELVDAIPEGQDLKI 60

Query: 174 YRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQ 233
           Y QGEWFDLCRGPH+ STGQV   FKLMKVAGAYWRGDSN  MLSRIYGTAW  Q +L  
Sbjct: 61  YNQGEWFDLCRGPHMASTGQVGTAFKLMKVAGAYWRGDSNNAMLSRIYGTAWADQADLDN 120

Query: 234 YLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEE 293
            L+ L E+EKRDHRKL REMDLFH  E+G GV+FWH KGW+IFQTL++YMRR++  DYEE
Sbjct: 121 DLHMLAEAEKRDHRKLGREMDLFHFQEEGPGVVFWHGKGWRIFQTLVAYMRRRLAVDYEE 180

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVK------CADDTIKDLRTFALKPMNCPGHVAV 347
           +N PQVLD  LW+ SGHW  Y+ NMFAVK       ++D   D R FALKPMNCPGHV +
Sbjct: 181 VNAPQVLDTSLWETSGHWGWYQENMFAVKSAHAMTHSEDKEADNRVFALKPMNCPGHVQI 240

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
           F HGLKSYRELP+RLAEFG V+R EPSG+LHGLMRVRGFTQDDAH+FCT EQM  ECLKI
Sbjct: 241 FKHGLKSYRELPIRLAEFGLVHRYEPSGALHGLMRVRGFTQDDAHIFCTDEQMAAECLKI 300

Query: 408 HNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENI 447
           ++LI+S+Y+DFGF++I+VKLSTRPEKRVGSDALWD AE +
Sbjct: 301 NDLILSVYEDFGFKEIVVKLSTRPEKRVGSDALWDRAEAV 340


>gi|156978155|ref|YP_001449061.1| threonyl-tRNA synthetase [Vibrio harveyi ATCC BAA-1116]
 gi|156529749|gb|ABU74834.1| hypothetical protein VIBHAR_06960 [Vibrio harveyi ATCC BAA-1116]
          Length = 394

 Score =  335 bits (859), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 152/400 (38%), Positives = 235/400 (58%), Gaps = 11/400 (2%)

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
            + HR++A ++DLFH      G+IFWH  GW++F+++ S+MR       ++E+NTP  + 
Sbjct: 1   MKTHREIAEQLDLFHSEPQAPGMIFWHPNGWRLFESIKSHMRSVYHRSGFQEVNTPVFMK 60

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           Q LWQ+SGH D +  NMF         +    + LKPM+CP H+ ++  G+ S+++LP++
Sbjct: 61  QELWQKSGHIDMFSENMFF----GGNQEQQSGYVLKPMSCPAHILLYKRGVHSHKDLPIK 116

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           L EFG V+RNE SGSL+G +R R FTQDDAHVFC  EQ  +E  +       +Y  +G+E
Sbjct: 117 LFEFGLVHRNESSGSLNGCLRARQFTQDDAHVFCQWEQAEDEVRQFLQRARKVYAAYGYE 176

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            I VK+ST+PEK +G D  W  A++I+            ++ +T +  GEGAFYGPK E 
Sbjct: 177 HIEVKVSTKPEKALGDDEDWIRAQDILVSACIH------EKFHTELQDGEGAFYGPKIEL 230

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L D++GR WQCGTIQ DFNL  RF+  + +       PV++H+A++GS+ER+IGI++E 
Sbjct: 231 SLTDSMGRSWQCGTIQFDFNLAKRFDVKFTSEEGTFEAPVIMHQAMYGSVERWIGILLEM 290

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            +G+LPLWL P    + ++  S   +A+ +A+ L    +    D    ++  K++    K
Sbjct: 291 SQGDLPLWLHPQPVAIASVNHSNCHFAKIVADRLLDIDIHALLDLSKSSMGRKMKRFHKK 350

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           KIP +I  GD E     + I+     +  +VS+      +
Sbjct: 351 KIPFVISIGDYEVENDVVSIKNRKEASETQVSMEHLAEYI 390


>gi|296820624|ref|XP_002849971.1| threonyl-tRNA synthetase [Arthroderma otae CBS 113480]
 gi|238837525|gb|EEQ27187.1| threonyl-tRNA synthetase [Arthroderma otae CBS 113480]
          Length = 520

 Score =  335 bits (859), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 138/452 (30%), Positives = 216/452 (47%), Gaps = 43/452 (9%)

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYM 283
           + + Q E          +   DHR L    +LF  +    G   +   G  I   LIS++
Sbjct: 36  SCSAQAETKTPGIRQASATLADHRALGTAQELFTNSIYSPGSPLFRPNGTHILNKLISFL 95

Query: 284 RRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK--DLRTFALKPMN 340
           R +  +  + E+ TP +  Q LW+ SGHW +Y+ +M+ V    +T +  +  T+ LKPMN
Sbjct: 96  RAQYRQYGFREVLTPNIYKQSLWEVSGHWQNYKDDMYEVGGRGNTAEATEDETYGLKPMN 155

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
           CPGH  +F     SYRELPVR A+F  ++RNE SGSL GL RVR F QDD H+FC   Q+
Sbjct: 156 CPGHCLLFKSQKHSYRELPVRYADFSPLHRNEVSGSLSGLTRVRRFHQDDGHIFCRPGQI 215

Query: 401 FNECLKIHNLIISIYKDFGFEKIMV--KLSTRPEKRVGSDALWDDAENIMKGVLDTIKNS 458
             E         ++ + FG          +   +  +G    W++AE  ++  LD     
Sbjct: 216 GGEIQLALKFADTVLQTFGLADGYRLVLSTRPEKDFIGCLEQWENAEQQLRQALDDSG-- 273

Query: 459 SQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC 518
               ++  +  G+GAFYGPK +  ++D+ G+  Q  TIQ+D NLP RF   Y+     + 
Sbjct: 274 ----LSWELNEGDGAFYGPKIDLQIQDSQGKYHQLSTIQLDMNLPQRFELEYLVPEGSEE 329

Query: 519 H---------PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQ 569
           +         PV+IHRA+FGS+ERF  ++IE + G  P WLSP QAI+ T+     + A+
Sbjct: 330 YDPATGGRATPVLIHRAIFGSLERFFALLIERYSGQWPFWLSPRQAILLTVGKGLEQAAE 389

Query: 570 EIANLLKSHH--------------------LSIETDFRNETINYKIREHSIKKIPIIIIC 609
           ++   +                         +++ D  + ++  KI +    +  ++ I 
Sbjct: 390 DVVAKISGFEPITASRPSKSGLPLSPLQPTFNVDLDLASRSLPKKIHDAHTARYNLVFIM 449

Query: 610 GDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           G K  +  S+ I   G  ++Q     D I  L
Sbjct: 450 GPKNLANGSVDIDFSGQVSSQS---EDEIKAL 478


>gi|153839391|ref|ZP_01992058.1| threonyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
 gi|149747086|gb|EDM58074.1| threonyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
          Length = 345

 Score =  335 bits (858), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 148/346 (42%), Positives = 228/346 (65%), Gaps = 11/346 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  +VA+SI   LAK  +A  +NG   D  D +  + S+EIIT +
Sbjct: 4   ITLPDGSQRQFDNPVSTMEVAQSIGPGLAKATIAGRVNGNRVDACDLIEEDASLEIITVK 63

Query: 66  DP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  A++ ++P+ ++AIGP I++GFYYD D ++  + ++L +IEK
Sbjct: 64  DEVDGLEIVRHSCAHLLGHALKQLYPQAKMAIGPTIDNGFYYDIDLDESLTQEDLEKIEK 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLC 183
           +M+E+       +K+ +S ++AR+ FES+ E YKVEIL E++   +   LY   E+ D+C
Sbjct: 124 RMKELAKTKYEVVKKKVSWQEARDTFESRGEPYKVEILDENVSRDDRPGLYHHEEYIDMC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
           RGPHV + G  + F  L  VAGAYWRG+S+  ML RIYGTA++ ++ L  +L  LEE+ K
Sbjct: 184 RGPHVPNMGFCQHFTLL-NVAGAYWRGNSDNKMLQRIYGTAFHDKKALKAHLTRLEEAAK 242

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRK+ +++DLFH+ ++  G++FWH  GW IF+ L  ++R K+ + DY+E+  P ++D+
Sbjct: 243 RDHRKIGKQLDLFHMQQEAPGMVFWHHNGWSIFRDLEVFVRDKLNEYDYQEVKGPLMMDR 302

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
            LW++SGHWD Y   MF       T  + R +A+KPMNCPGHV + 
Sbjct: 303 VLWERSGHWDKYADAMFT------TSSENREYAIKPMNCPGHVQIL 342


>gi|312217649|emb|CBX97596.1| hypothetical protein [Leptosphaeria maculans]
          Length = 829

 Score =  335 bits (858), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 150/428 (35%), Positives = 216/428 (50%), Gaps = 55/428 (12%)

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
             DHR LA   DLF  +    G       G  +FQ L +++R +     +EE+ TP +  
Sbjct: 95  STDHRTLAETHDLFITSPYSPGSPLLLPNGAYVFQKLQAFLRAQYPQFGFEEVITPIIYK 154

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIK-------DLRTFALKPMNCPGHVAVFNHGLKS 354
           + LW++SGHW +Y  +MF+V+    T +       D   F LKPMNCPGH  +F   + S
Sbjct: 155 KSLWEKSGHWQNYAEDMFSVQGRGATAEIPQAEAEDNGEFGLKPMNCPGHCILFRDKVMS 214

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           YR LPVR A+F +++RNE SG+L GL RVR F QDDAH+FC  +Q+  E  +    +  +
Sbjct: 215 YRNLPVRYADFSALHRNEISGALTGLTRVRRFHQDDAHIFCRPDQILAEIEQTLKFVGMV 274

Query: 415 YKDFGFEKIMVKLSTRP-EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           Y  FG     + LSTRP E  +G+   WD AE  +   LD I +         V  G+GA
Sbjct: 275 YNTFGLGPYKLLLSTRPKENFIGTIEEWDRAEAQLSTALDNIGS------EWAVNEGDGA 328

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS----------------HSEK 517
           FYGPK + ILKD+ G++ Q  TIQ+DF LP RF+  Y  S                 +  
Sbjct: 329 FYGPKIDIILKDSNGKEHQTATIQLDFQLPQRFDLQYQASPEEIEAGSEMSMDAGLDTSL 388

Query: 518 CHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSS-----AVEYAQEIA 572
             PVMIHRA++GSIERF+ ++IE++ G  P WLSP  AI+ ++ S       V + Q + 
Sbjct: 389 RRPVMIHRAIYGSIERFMALLIEHYAGKYPFWLSPRPAIILSLNSDPKLLQHVSHIQAVL 448

Query: 573 NLLKSHHLSI-------------------ETDFRNETINYKIREHSIKKIPIIIICGDKE 613
           + +K+    +                   + D  +  +  KI E    K   II+ G +E
Sbjct: 449 SGVKASKEPVVSPPSDPKPLPLSTIQLPIDIDTSSRPLGKKIAEARTNKYNHIIVVGGRE 508

Query: 614 ASERSIGI 621
                + +
Sbjct: 509 IEAGVMNL 516


>gi|229494206|ref|ZP_04387969.1| threonyl-tRNA synthetase [Rhodococcus erythropolis SK121]
 gi|229318568|gb|EEN84426.1| threonyl-tRNA synthetase [Rhodococcus erythropolis SK121]
          Length = 406

 Score =  334 bits (857), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 130/415 (31%), Positives = 203/415 (48%), Gaps = 20/415 (4%)

Query: 242 EKRDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQV 299
              DHR+L R+++ F      G+G+  W   G  I   L  +   +        + TP +
Sbjct: 1   MSIDHRELGRDLEFFATTPIVGAGLPLWLPDGAVIRNELEKFAAEQAARSGCRGVYTPVM 60

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             + L+++SGHW  +  +MF             +F L+P NCP H  VF    +SYRELP
Sbjct: 61  AKKELYERSGHWSKFSDDMFPEMKIG-----GESFLLRPANCPHHAQVFAARGRSYRELP 115

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
            R+ E GS++R+E SG L GL RVR    DDAHVFC++EQ+  E +   + I   Y   G
Sbjct: 116 FRVRELGSMFRSELSGVLSGLSRVRQINLDDAHVFCSREQVQAEVIVALDAIERCYSTLG 175

Query: 420 FEKIMVKLSTR--PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
             +   +LS R    + +G+D  W DAE+ ++G L+         I      GE AFYGP
Sbjct: 176 IAERKYRLSIRGGEGQYLGTDEQWADAEDHLRGALNA------RSIEYVEAKGEAAFYGP 229

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  ++DA GR+    T+Q+DFN P RF+  Y      K  PVMIHR + GS+ER   +
Sbjct: 230 KIDVQVRDAHGREETLSTVQLDFNQPERFDLEYTAEDGSKVRPVMIHRGLLGSMERMTAL 289

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +IE F+G +P WL+P Q  +  +       A+ +   L++  + +     + ++  +IRE
Sbjct: 290 LIERFEGRMPPWLAPNQVSILPVGDRHQVEAERLRADLEARDVRVAI-APDGSLGRRIRE 348

Query: 598 HSIKKIPIIIICGDKEASERSIGIRR--FGSTTTQK--VSLLDAIPILTKESLPP 648
               + P I + GD E    ++ +     G        V +   +  + + +L P
Sbjct: 349 ARTHRDPYIAVIGDNEVHGGTVDVLVPARGGRAVVDAGVFVAQVVSGIKERALLP 403


>gi|315043510|ref|XP_003171131.1| threonyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
 gi|311344920|gb|EFR04123.1| threonyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
          Length = 523

 Score =  334 bits (857), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 148/479 (30%), Positives = 225/479 (46%), Gaps = 44/479 (9%)

Query: 199 KLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI 258
           K      + WR              + + QQE          +   DHR L    DLF  
Sbjct: 14  KSFFCQTSRWRPAFTAASPVHSRFCSCSAQQETKTPDIKPAATASADHRALGTAQDLFTN 73

Query: 259 AEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRAN 317
           +    G   +   G  I   LIS++R +  +  + E+ TP +  Q LW+ SGHW +Y+ +
Sbjct: 74  SIYSPGSPLFRPNGTHILNKLISFLRAQYRQYGFREVLTPNIYKQSLWEVSGHWQNYKDD 133

Query: 318 MFAVKCADDTIK--DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
           M+ V    DT    +  T+ LKPMNCPGH  +F     SYRELPVR A+F  ++RNE SG
Sbjct: 134 MYEVGGRGDTGDSTENETYGLKPMNCPGHCLLFKSQKHSYRELPVRYADFSPLHRNEVSG 193

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV--KLSTRPEK 433
           SL GL RVR F QDD H+FC   Q+ +E         ++ + FG          +   + 
Sbjct: 194 SLSGLTRVRRFHQDDGHIFCRPGQIGSEIQLALKFADTVLQTFGLADGYRLVLSTRPEKD 253

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
            +GS   W++AE  ++  LD         ++  +  G+GAFYGPK +  ++D+ G+  Q 
Sbjct: 254 FIGSLEQWENAEQQLRQALD------NSGLSWELNEGDGAFYGPKIDLQIQDSQGKYHQL 307

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCH---------PVMIHRAVFGSIERFIGIMIENFKG 544
            TIQ+D NLP RF   Y+     + +         PV+IHRA+FGS+ERF  ++IE + G
Sbjct: 308 STIQLDMNLPQRFGLEYLVPEGSEEYDPATGGRATPVLIHRAIFGSLERFFALLIERYNG 367

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH--------------------LSIET 584
             P WLSP QAI+ T+     + A+++   +                         +++ 
Sbjct: 368 QWPFWLSPHQAILLTVGKGLEQAAEDVVAKVSGFEPITSTHPSSTGLPLSPLQPTFNVDL 427

Query: 585 DFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRF----GSTTTQKVSLLDAIP 639
           D  + ++  KI +    +  ++ I G K  +E S+ I       G T  +  +LLD IP
Sbjct: 428 DLASRSLPKKIHDAHAARYNLVFIMGPKNLAEGSVDIDLSGQIGGKTEDEIKALLDGIP 486


>gi|163840211|ref|YP_001624616.1| threonyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
 gi|162953687|gb|ABY23202.1| threonyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
          Length = 453

 Score =  334 bits (855), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 126/459 (27%), Positives = 216/459 (47%), Gaps = 21/459 (4%)

Query: 189 RSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRK 248
             T    + ++ +     +W     R  L                     +     DHR+
Sbjct: 1   MRTNNTVRPWETIPGPFCFW-----RRFLGHFTKNPEEIMNNDVDQSNIDQAKALADHRQ 55

Query: 249 LAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQ 306
           L RE+DLF      G G+  W   G  I   L      + ++  Y+ + +P +  + L++
Sbjct: 56  LGRELDLFASNPLIGPGLPLWLPDGAVIRTELEKLAVEESLRSGYQRVYSPVLAKRELYE 115

Query: 307 QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFG 366
           +SG W  +  +MF      +         L+P NCP H  +F     S+RELP+R AE G
Sbjct: 116 RSGRWAKFSEDMFPPLRIGN-----EELVLRPANCPHHAMLFAARPHSWRELPIRYAELG 170

Query: 367 SVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK 426
           S++R+E SG L GL RVR    DD HVFCT EQ  +E ++    I + Y   G E    +
Sbjct: 171 SMFRSELSGVLSGLSRVRQINLDDCHVFCTPEQAQSEVVRGIQAISAGYSILGLEPDYFR 230

Query: 427 LSTRP--EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           LS R       GS + W  AE+++K  LD +       +    + GE AFYGPK +    
Sbjct: 231 LSARDSGTSFAGSASDWAAAESVLKAALDELG------LPYRRVAGEAAFYGPKIDVQFF 284

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           DA G++    T+Q+DF  P RF+  Y+        P+M+HR +FG++ER + ++IE  +G
Sbjct: 285 DAAGKEETLSTVQLDFVQPERFDLAYIGDDGAAHRPMMVHRGLFGAMERTVALLIEKHQG 344

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
            +P WL+P+Q  V  ++ +      EI+    +  + +  D  + ++  ++R+ S +++ 
Sbjct: 345 KMPPWLAPVQLAVLPVSDTQAARCAEISAQALAAGIRVIVD-HDGSVGSRVRKTSQRRVS 403

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            + + G +E+    + +   G+   Q + + +AI ++ +
Sbjct: 404 WLAVVGSQESESGKLSLSIPGARPAQLLPVTEAIELMRQ 442


>gi|282898000|ref|ZP_06305995.1| Threonyl-tRNA synthetase, class IIa [Raphidiopsis brookii D9]
 gi|281197144|gb|EFA72045.1| Threonyl-tRNA synthetase, class IIa [Raphidiopsis brookii D9]
          Length = 332

 Score =  333 bits (853), Expect = 6e-89,   Method: Composition-based stats.
 Identities = 128/330 (38%), Positives = 190/330 (57%), Gaps = 10/330 (3%)

Query: 318 MFAVKCADDTIKD-LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
           MF +   ++  K   + F LKPMNCP H+ ++   L+SYRELP+RLAEFG+VYR E SG 
Sbjct: 1   MFPMMAENEESKALDQGFVLKPMNCPFHIQIYKSELRSYRELPMRLAEFGTVYRYEQSGE 60

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE---K 433
           L GL RVRGFT DD+H+F T EQ+  E L + +LI+++++    +    +LS R     K
Sbjct: 61  LGGLTRVRGFTVDDSHLFVTPEQLDGEFLNVVDLILTVFRSLQLKNFKARLSFRDPTSDK 120

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
            +G D +WD AE  ++  +  +     + I      GE AFYGPK ++I  D + R+WQ 
Sbjct: 121 YIGGDEVWDKAEGAIRRAVQQLGMDHFEGI------GEAAFYGPKLDFIFSDVLEREWQL 174

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI 553
           GT+QVD+NLP RF+  YV     +  PVMIHRA FGS+ER IGI+IE + G+ PLWL+P+
Sbjct: 175 GTVQVDYNLPERFDLEYVAEDGSRKRPVMIHRAPFGSLERLIGILIEEYAGDFPLWLAPV 234

Query: 554 QAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
           Q  +  +    +E+ +EIA  +    +  + D   + +   IR     KIP++ + G KE
Sbjct: 235 QIRLLPVGEQQIEFTKEIARKMTELGIRAQADLSGDRLAKLIRNGEKDKIPVMAVVGAKE 294

Query: 614 ASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
               S+ IR   S     + +   +  + +
Sbjct: 295 VETNSLSIRTRASGELGVIPVEKVVEKMQE 324


>gi|153839390|ref|ZP_01992057.1| threonyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
 gi|149747085|gb|EDM58073.1| threonyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
          Length = 287

 Score =  331 bits (848), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 137/283 (48%), Positives = 186/283 (65%), Gaps = 6/283 (2%)

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AEFGS +RNEPSG+LHG+MRVRGFTQDDAH+FCT+ Q+  E      ++   Y+ FGF+
Sbjct: 1   MAEFGSCHRNEPSGALHGIMRVRGFTQDDAHIFCTESQIQEEVTSCIKMVYDTYQTFGFD 60

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            I+VKLSTRPEKRVGSD +WD +E  +K  L++++      I   +  GEGAFYGPK E+
Sbjct: 61  NIVVKLSTRPEKRVGSDEIWDQSEEALKQSLESME------IPYEIQEGEGAFYGPKIEF 114

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            L D + R WQCGT+Q+DFNLP R  A YV  ++E+  PVMIHRA+ GS+ERFIGI+IE 
Sbjct: 115 TLYDCLDRAWQCGTVQLDFNLPGRLGATYVGENNERLVPVMIHRAILGSLERFIGILIEE 174

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G  P WL+P QA++  IT     Y QEI   L+   +  + D RNE I +KIREH++K
Sbjct: 175 YAGFFPTWLAPEQAVLMNITDKQSGYVQEIVQKLQKSGIRAKADLRNEKIGFKIREHTLK 234

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           ++P +++ GD+E     I +R        K  + D I  +  E
Sbjct: 235 RVPYMLVVGDQEMEAGEIAVRTRKGKDLGKFKVDDFIAYIQDE 277


>gi|326471753|gb|EGD95762.1| threonyl-tRNA synthetase [Trichophyton tonsurans CBS 112818]
          Length = 511

 Score =  331 bits (848), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 138/455 (30%), Positives = 216/455 (47%), Gaps = 45/455 (9%)

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYM 283
           + + QQ+          +   DHR L    DLF  +    G   +   G  I   LI+++
Sbjct: 24  SCSAQQDTKTPDIKPASTASADHRALGTAQDLFTNSIYSPGSPLFRPNGTHILNKLITFL 83

Query: 284 RRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK-----DLRTFALK 337
           R +  +  + E+ TP +  Q LW+ SGHW +Y+ +M+ V    DT +     +   + LK
Sbjct: 84  RAQYKQYGFREVLTPNIYKQSLWEVSGHWQNYKDDMYEVGGRGDTGETSETSENEIYGLK 143

Query: 338 PMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK 397
           PMNCPGH  +F     SYRELPVR A+F  ++RNE SGSL GL RVR F QDD H+FC  
Sbjct: 144 PMNCPGHCLLFKSQKHSYRELPVRYADFSPLHRNEVSGSLSGLTRVRRFHQDDGHIFCRP 203

Query: 398 EQMFNECLKIHNLIISIYKDFGFEKIMV--KLSTRPEKRVGSDALWDDAENIMKGVLDTI 455
            Q+ +E         ++ + FG          +   +  +GS   W++AE  ++  LD  
Sbjct: 204 GQIGSEIQLALKFADTVLQTFGLADGYRLVLSTRPEKDFIGSLEQWENAEQQLRQALD-- 261

Query: 456 KNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS 515
                  ++  +  G+GAFYGPK +  ++D+ G+  Q  TIQ+D NLP RF   Y+    
Sbjct: 262 ----NSGLSWELNEGDGAFYGPKIDLQIQDSQGKYHQLSTIQLDMNLPQRFELEYLVPEG 317

Query: 516 EKCH---------PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVE 566
            + +         PV+IHRA+FGS+ERF  ++IE + G  P WLSP QAI+ TI     +
Sbjct: 318 SEEYDPATGGRATPVLIHRAIFGSLERFFALLIERYNGQWPFWLSPRQAILLTIGKGLEQ 377

Query: 567 YAQEIANLLKSHH--------------------LSIETDFRNETINYKIREHSIKKIPII 606
            A++    +                         +++ D  + ++  KI +    +  ++
Sbjct: 378 AAEDAVAKISGFEPITSSRPSSTGLPLSPLQPTFNVDLDLASRSLPKKIHDAHAARYNLV 437

Query: 607 IICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            I G K  ++ S+ I    S      S  +   +L
Sbjct: 438 FIMGPKNVADGSVDIDL--SGQVGGKSEDEIKALL 470


>gi|310789927|gb|EFQ25460.1| threonyl-tRNA synthetase [Glomerella graminicola M1.001]
          Length = 526

 Score =  330 bits (846), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 138/451 (30%), Positives = 214/451 (47%), Gaps = 73/451 (16%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINT 296
             E +  DHRKL    +LF  +    G   +   G ++F  L+ ++RR+     +EE+ T
Sbjct: 46  TAEHDLPDHRKLGIRQELFTTSVYSPGSPIFLPNGTRVFNRLVDFLRRQYVHYGFEEVIT 105

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL------------------------- 331
           P +  + LW++SGH  +Y  +M+ V       ++                          
Sbjct: 106 PNIYKKSLWERSGHLQNYADDMYTVTSRARAPEEKAAGCCGADGRSPPHEGSGETARTAE 165

Query: 332 ---RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQ 388
                + LKPMNCPGH  +F    +SYR+LP+R A+F  ++RNE SG+L GL RVR F Q
Sbjct: 166 GEDDDYGLKPMNCPGHCLIFASKTRSYRDLPIRFADFSPLHRNEISGALSGLTRVRRFHQ 225

Query: 389 DDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP-EKRVGSDALWDDAENI 447
           DD H+FC   Q+  E  K  + + ++Y   G +     LSTRP +  +G+DA W+ AE  
Sbjct: 226 DDGHIFCRPIQIREEVFKTLDFMKTVYGALGLDYFDFALSTRPADHYIGTDAEWERAEGQ 285

Query: 448 MKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFN 507
           ++  L+      Q  +   V  G+GAFYGPK + +L D+ G+  Q GTIQ+DF LP RFN
Sbjct: 286 LRDALE------QAGLKYTVKEGDGAFYGPKIDVMLHDSHGKSHQAGTIQLDFQLPQRFN 339

Query: 508 AFYVNSHSEKC--------------------HPVMIHRAVFGSIERFIGIMIENFKGNLP 547
             Y     +                       PVM+HRA+ GS+ER + ++IE +KG  P
Sbjct: 340 LEYKAPAPKLEAQGLPLEKADPAELETYGSVTPVMVHRAILGSVERLMALLIEEYKGKWP 399

Query: 548 LWLSPIQAIV--TTITSSAVEYAQEIANLLKSH---------------HLSIETDFRNET 590
            WL+P Q ++     T   V +A EI + L  H                 +++ D    +
Sbjct: 400 FWLNPRQCVILTLNDTEPVVRWASEIKDTLTGHDRVRDPNKPVQPRPTGFAVDIDVSPRS 459

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGI 621
           +  K+ E   K   +I + G K    +++ +
Sbjct: 460 LQKKLAEAIEKGYGLIAVVGKKNVENQTVTV 490


>gi|119573935|gb|EAW53550.1| threonyl-tRNA synthetase-like 1, isoform CRA_c [Homo sapiens]
          Length = 344

 Score =  330 bits (846), Expect = 5e-88,   Method: Composition-based stats.
 Identities = 131/334 (39%), Positives = 186/334 (55%), Gaps = 10/334 (2%)

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           +  D T     T ALKPMNCP H  +F H  +S+RELP+RLA+FG+++R E SG L GL 
Sbjct: 16  QSDDSTRHITDTLALKPMNCPAHCLMFAHRPRSWRELPLRLADFGALHRAEASGGLGGLT 75

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALW 441
           R+R F QDDAH+FCT +Q+  E     + + S+Y   GF   +  LSTRP   +G   LW
Sbjct: 76  RLRCFQQDDAHIFCTTDQLEAEIQSCLDFLRSVYAVLGFSFRLA-LSTRPSGFLGDPCLW 134

Query: 442 DDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFN 501
           D AE ++K  L              +  G+GAFYGPK +  L DA+GR  QCGTIQ+DF 
Sbjct: 135 DQAEQVLKQALKEFGEPWD------LNSGDGAFYGPKIDVHLHDALGRPHQCGTIQLDFQ 188

Query: 502 LPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT 561
           LP RF+  Y         PV+IHRAV GS+ER +G++ E+  G  PLWLSP Q +V  + 
Sbjct: 189 LPLRFDLQYKGQAGALERPVLIHRAVLGSVERLLGVLAESCGGKWPLWLSPFQVVVIPVG 248

Query: 562 SSAVEYAQEIANLLKSHHLSIETD-FRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
           S   EYA+E    L++  L  + D     T++ +IR   +       + G KE S+R++ 
Sbjct: 249 SEQEEYAKEAQQSLRAAGLVSDLDADSGLTLSRRIRRAQLAHYNFQFVVGQKEQSKRTVN 308

Query: 621 IRRFGSTTTQKVSLLDAIPILTK--ESLPPDCQK 652
           IR   +    +  L +A+  L +   +  P+ ++
Sbjct: 309 IRTRDNRRLGEWDLPEAVQRLVELQNTRVPNAEE 342


>gi|327293177|ref|XP_003231285.1| threonyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
 gi|326466401|gb|EGD91854.1| threonyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
          Length = 526

 Score =  328 bits (841), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 137/451 (30%), Positives = 212/451 (47%), Gaps = 45/451 (9%)

Query: 228 QQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI 287
           QQ+          +   DHR L    DLF  +    G   +   G  I   LI+++R + 
Sbjct: 43  QQDTKTPATKPTSTASADHRALGTAQDLFTNSIYSPGSPLFRPNGTHILNKLITFLRAQY 102

Query: 288 -KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADD-----TIKDLRTFALKPMNC 341
            +  + E+ TP +  Q LW+ SGHW +Y+ +M+ V    D        +   + LKPMNC
Sbjct: 103 KQYGFREVLTPNIYKQSLWEVSGHWQNYKDDMYEVGGRGDTGDTGETSENEIYGLKPMNC 162

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
           PGH  +F     SYRELPVR A+F  ++RNE SGSL GL RVR F QDD H+FC   Q+ 
Sbjct: 163 PGHCLLFKSQKHSYRELPVRYADFSPLHRNEVSGSLSGLTRVRRFHQDDGHIFCRPGQIG 222

Query: 402 NECLKIHNLIISIYKDFGFEKIMV--KLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSS 459
           +E         ++ + FG          +   +  +GS   W++AE  ++  LD      
Sbjct: 223 SEIQLALKFADTVLQTFGLADGYRLVLSTRPEKDFIGSLEQWENAEQQLRQALD------ 276

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
              ++  +  G+GAFYGPK +  ++D+ G+  Q  TIQ+D NLP RF   Y+     + +
Sbjct: 277 NSGLSWELNEGDGAFYGPKIDLQIQDSQGKYHQLSTIQLDMNLPQRFELDYLVPEGSEEY 336

Query: 520 ---------PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQE 570
                    PV+IHRA+FGS+ERF  ++IE + G  P WLSP QAI+ TI     + A++
Sbjct: 337 DPATGGRATPVLIHRAIFGSLERFFALLIERYNGQWPFWLSPRQAILLTIGKGLEQTAED 396

Query: 571 IANLLKSHH--------------------LSIETDFRNETINYKIREHSIKKIPIIIICG 610
               +                         +++ D  + ++  KI +    +  ++ I G
Sbjct: 397 AVAKISGFEPITSSRPSSTGLPLSPLQPTFNVDLDLASRSLPKKIHDAHAARYNLVFIMG 456

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            K  ++ S+ I    S      S  +   +L
Sbjct: 457 PKNVADGSVDIDL--SGQVGGKSEDEIKALL 485


>gi|58699329|ref|ZP_00374107.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|58534152|gb|EAL58373.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
          Length = 356

 Score =  328 bits (841), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 172/365 (47%), Positives = 249/365 (68%), Gaps = 12/365 (3%)

Query: 4   DIKLTF-PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
            I++TF  +  +K +    TG D+ +     + K+A+A  +NG++ DLS  +  +  IE+
Sbjct: 1   MIRITFSAEQKVKEYSGKVTGFDILQ---PDVLKEAIAFKVNGELHDLSREIEADAEIEV 57

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           I   D   L +IRH  AHIMA+AV+ ++P  Q+ IGP I+DGFYYDF   + F++D+L  
Sbjct: 58  IQLSDEAGLDIIRHDAAHIMAQAVKELFPNTQITIGPTIQDGFYYDFATGRTFTTDDLTA 117

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEKKM+EI+  +  F+++  + ++A + F    E YKV+I+ SIP  EN+T+YRQG++ D
Sbjct: 118 IEKKMKEIVKSNHRFVREVWTRKQAIDFFSDIGEKYKVDIISSIPEGENLTVYRQGDFID 177

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH  STG+VK F KLMKVAGAYWRGD+  PML RIYGTAW  + EL  YL  L+E+
Sbjct: 178 LCRGPHSPSTGRVKAF-KLMKVAGAYWRGDAKGPMLQRIYGTAWRNKDELNAYLECLKEA 236

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVL 300
           EKRDHRK+A++MDLFHI E+  G +FWH +G+ ++  L SY+R+K+  + Y E+ TP ++
Sbjct: 237 EKRDHRKIAKDMDLFHIQEEAVGQVFWHEQGYILYNVLESYIRKKLINNGYFEVKTPILV 296

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            + LW++SGHWD +R NMF V        + +  A+KPMNCP HV +FN   +SYR+LP+
Sbjct: 297 SKELWEKSGHWDKFRENMFIV-----DESESKKLAIKPMNCPCHVQIFNSHTRSYRDLPI 351

Query: 361 RLAEF 365
           R+A+ 
Sbjct: 352 RMADL 356


>gi|260775804|ref|ZP_05884700.1| threonyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
 gi|260608220|gb|EEX34389.1| threonyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
          Length = 392

 Score =  327 bits (839), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 143/407 (35%), Positives = 239/407 (58%), Gaps = 19/407 (4%)

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
              +HRK+ +++ LF I+E  SG++ W+ KG ++++ + +Y+R  + +  Y E+ +P + 
Sbjct: 1   MINEHRKIGKQLKLFDISESVSGMVDWYPKGHELYRKVQAYIRSVQKRYGYHEVRSPVLA 60

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  +W  SGH + Y  NMF V             ++KPM+CP H+++FN  + SYRELP 
Sbjct: 61  NHSVWTTSGHNEKYGENMFHV--------PEHNLSVKPMSCPFHISMFNELVSSYRELPY 112

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AEFG  +RNE SGSL+GL R+R F QDD H+FC ++Q+ +E      ++  +Y+ FGF
Sbjct: 113 RIAEFGLCHRNESSGSLNGLFRLRAFNQDDGHIFCQEQQIKDELKHFCAMLFEMYEHFGF 172

Query: 421 --EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
             + I VK+S RP+ ++GSD LW  +E  ++  LD +       I   +L GEGAFYG K
Sbjct: 173 SRKDISVKISLRPKNKIGSDELWSRSELYLQEGLDELG------IGYELLPGEGAFYGAK 226

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E+ LKD++ R WQCGT Q+DF L  +F++ ++N   +  +PV++HRA  GS+ERFI I+
Sbjct: 227 VEFSLKDSLDRHWQCGTFQLDFFLSEKFDSSFINELGDSEYPVVLHRAALGSLERFIAIL 286

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           +E++KG LP+  +P   ++  +T     Y  E+   L +  ++   D  + ++ Y++R+ 
Sbjct: 287 LEHYKGRLPVQFNPYAVVLVPLTVEHQAYCHELQEQLGAMGIACIIDDSDNSVGYRVRQS 346

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
              K   +I+ GD E     +G++       ++VS         ++S
Sbjct: 347 YKMKCNYLIVIGDDELKSDVLGLKS--GKDVKEVSREHLSSFFIEQS 391


>gi|119186087|ref|XP_001243650.1| hypothetical protein CIMG_03091 [Coccidioides immitis RS]
          Length = 560

 Score =  327 bits (838), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 147/443 (33%), Positives = 218/443 (49%), Gaps = 55/443 (12%)

Query: 212 SNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRK 271
             R  ++R       + +        ++ +   DHR +  + DLF       G  ++H  
Sbjct: 84  ERRDKVTRPDSRTARSARHPDDEAPPIDSATGIDHRIIGTDQDLFGSTPFSPGSPYFHPD 143

Query: 272 GWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCA------ 324
           G  IF  L+S++R +  +  +EE+ TP +  + LW++SGHW  Y+ +M+ V+        
Sbjct: 144 GAHIFNKLMSFLRAQYKQYGFEEVITPTMYKKSLWEKSGHWYIYKDDMYEVRGRGATGQT 203

Query: 325 -DDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRV 383
            D  I +   + LKPMNCPGH  +F    +SYR LPVR AEF  ++RNE SGSL GL RV
Sbjct: 204 VDVEIGEDEQYGLKPMNCPGHCVLFASKTRSYRSLPVRFAEFSPLHRNEISGSLSGLTRV 263

Query: 384 RGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE-KRVGSDALWD 442
           R F QDD H+FC  EQ+  E         S+   FG E   + LSTRPE   +GS ALW+
Sbjct: 264 RRFHQDDGHIFCRPEQIEREIELTLQFTESVLSTFGLEDYRLVLSTRPEKDYLGSLALWN 323

Query: 443 DAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNL 502
           DAEN +K  LD             +  G+GAFYGPK +  ++D+ G+  Q  TIQ+D NL
Sbjct: 324 DAENQLKDALDKSGKPWH------INEGDGAFYGPKIDLQIRDSRGKYHQLSTIQLDMNL 377

Query: 503 PSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITS 562
           P RF                   A+FGS+ERF  ++ E++ G  P WLSP Q I+ T+ +
Sbjct: 378 PQRFGLE----------------AIFGSLERFFALLAEHYNGRWPFWLSPRQGIILTVNN 421

Query: 563 S--AVEYAQEIANLLK----------------------SHHLSIETDFRNETINYKIREH 598
               +  AQ +A+ ++                           I+ D  + ++  KIRE 
Sbjct: 422 DPQVLRTAQTVASGMRGYQSLTFNESEVVATPGLLYPAQATFQIDVDTSSRSLGKKIREA 481

Query: 599 SIKKIPIIIICGDKEASERSIGI 621
             +K  +I + G  + S  S+G+
Sbjct: 482 MGRKYKLIFVIGPSDVSNGSVGV 504


>gi|302528111|ref|ZP_07280453.1| threonyl-tRNA synthetase [Streptomyces sp. AA4]
 gi|302437006|gb|EFL08822.1| threonyl-tRNA synthetase [Streptomyces sp. AA4]
          Length = 415

 Score =  327 bits (837), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 128/407 (31%), Positives = 192/407 (47%), Gaps = 20/407 (4%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEI 294
           F EE+   DHRKL RE+ LF      G+G+ +    G  I   L  Y+R  + +  Y+ +
Sbjct: 8   FREETAMPDHRKLGRELGLFGSDPLIGAGLPYLLPDGAAIRHVLEEYVREVERRAGYQHV 67

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
           ++P +  + L++ SGHW  YR +MF                L+P  CP H  ++     S
Sbjct: 68  SSPVLGKRELYELSGHWAHYREDMFPPMDLG-----GEQVVLRPSLCPHHALIYRSRAHS 122

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           +RELP+RLAE G +YR E SG L GL RVR    +DAH+FC  EQ+  E      LI  +
Sbjct: 123 HRELPLRLAELGGMYRAELSGVLGGLSRVRAIQLNDAHIFCLPEQVGAEVRGALELIRRV 182

Query: 415 YKDFGFEKIMVKLS--TRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
            +D G +    +LS      K  G+   WD A  ++   LD         I      GE 
Sbjct: 183 CQDLGLKPARYRLSLPDNRGKYAGAAEAWDRAAEVLVEALD--------GIEYERGPGEA 234

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           AFYGPK +  L D+ GR+    T+Q+D + P +F   YV        PV++HRAV GS+E
Sbjct: 235 AFYGPKIDVQLADSSGRESTLSTVQIDLHQPEQFGLEYVGPDGRAHRPVLVHRAVLGSLE 294

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE-TI 591
           R +  +IE   G  P WL+P+Q  V  +  + +  A+ +A    +  L  E    +  ++
Sbjct: 295 RVLAQLIEEHGGAFPPWLAPVQVAVLPVGDAELAAAEAVAEEAMAAGLRAEVVPADRGSL 354

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
             +IR+  +  +P   + G  EA    +  R         +   + I
Sbjct: 355 GARIRDRRL--VPYQAVVGPLEADAGLVAPRLRDGRRLDPLLAKEFI 399


>gi|167520264|ref|XP_001744471.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163776802|gb|EDQ90420.1| predicted protein [Monosiga brevicollis MX1]
          Length = 473

 Score =  327 bits (837), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 140/478 (29%), Positives = 223/478 (46%), Gaps = 48/478 (10%)

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYW-----------RGDSNRPMLSRIYGTAWNTQQELTQ 233
           GPH+ ST          + + A+              +     L R++  A+ TQ+E+ Q
Sbjct: 1   GPHIGSTSHFAALKTTNQSSVAWKPSEPAYFTAPAGHEDREYKLQRVHAVAFPTQKEMKQ 60

Query: 234 YLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYE 292
           Y   LE +++R H+ + +E  LF +     G  FW   G +IF+ L + +R       +E
Sbjct: 61  YEARLEMAKQRTHQHIGQEQKLFFLDARSPGAPFWLPHGLRIFKRLEALVRGVHSNYGFE 120

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+ +P V  QHLW  SGHW+ Y  +M  ++  +D        ALKPMNCP H  +F+H  
Sbjct: 121 EVKSPLVYKQHLWNTSGHWEHYSEDMTVLQHKEDEEVCQ---ALKPMNCPAHCIMFSHEP 177

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
            SYRELP+R AE  +++RNE SG+L GL RVR F QDD H+FC  +Q+ +E  +    I 
Sbjct: 178 HSYRELPLRFAEHSALHRNEASGALSGLTRVRQFHQDDGHIFCRPDQVSSEVARCLEAIG 237

Query: 413 SIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
            +Y   G     V  +      VGS  +W      ++                       
Sbjct: 238 VVYARLGLTPTAVLSTRPETGYVGSLEIWC----ALRSSFI------------------- 274

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
                  +  ++DA+GR  Q  TIQ+DFN+P RF   Y +       PV+IHRAV GS E
Sbjct: 275 ------IDIRVRDAMGRTHQTATIQLDFNMPMRFELSYKDEDGAPQTPVLIHRAVLGSFE 328

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
           R + ++ E + G  PL LSP Q ++  ++     YA ++ + L+     ++ D    +++
Sbjct: 329 RMMALLTEQYWGRWPLHLSPRQLLILPVSEKHASYAWDVYHELQPFGH-VDVDDSPVSLS 387

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK---ESLP 647
            +I +  + +   + + GD+E +  ++ IR               +  L +   E LP
Sbjct: 388 KRIAQQRVLRHNYVAVVGDEEVANDTLSIRHRDGAYVASPDAEADLARLLRHDMEQLP 445


>gi|242774039|ref|XP_002478362.1| threonyl-tRNA synthetase [Talaromyces stipitatus ATCC 10500]
 gi|218721981|gb|EED21399.1| threonyl-tRNA synthetase [Talaromyces stipitatus ATCC 10500]
          Length = 532

 Score =  327 bits (837), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 151/478 (31%), Positives = 222/478 (46%), Gaps = 68/478 (14%)

Query: 186 PHVRSTGQVKKF-FKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           P V ST  V+        +        S R  LSR   T   +             +   
Sbjct: 26  PEVASTAGVRYCSCHSNSLTRPGQHDSSARSSLSRPNNTNAPSNI--------QSSTPAA 77

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQH 303
           DHR L    +LF  +    G   +   G  I   LI ++R +  +  + E+ TP +  + 
Sbjct: 78  DHRVLGTAQELFTSSSYSPGSPLFLPNGTHIINKLIGFLRAQYRQYGFREVLTPNIYKKS 137

Query: 304 LWQQSGHWDSYRANMFAVKCA------DDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           LW+ SGHW +Y+ +M+ V+        +  + +   + LKPMNCPGH  +F     SYR+
Sbjct: 138 LWEISGHWQNYKDDMYEVRGRGATGETEGELGEDEQYGLKPMNCPGHCLLFKSQNHSYRD 197

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LPVR A+F  ++RNE SGSL GL RVR F QDD H+FC  +Q+  E       +  + K 
Sbjct: 198 LPVRYADFSPLHRNEISGSLSGLTRVRRFHQDDGHIFCRPQQIGKEIDLALAFVNMVMKT 257

Query: 418 FGFEKIMVKLSTRPE-KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           FG  K  + LSTRPE   +GS  LWD+                +  +   +  G+GAFYG
Sbjct: 258 FGLPKYTLVLSTRPEKDFIGSLELWDN----------------KSGLPWELNEGDGAFYG 301

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE---------KCHPVMIHRAV 527
           PK +  L+D+ G+  Q  TIQ+D NLP RF   Y  +  E         K  PV+IHRA+
Sbjct: 302 PKIDIQLQDSDGKYHQLSTIQLDLNLPQRFELEYQVAEGEPDYNPNTPGKATPVLIHRAI 361

Query: 528 FGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSS--AVEYAQEIANLLKSHHLS---- 581
           FGS+ERF+ I+IE + G  P WLSP Q I+ T+ +    +  A+E A  +          
Sbjct: 362 FGSLERFLAILIELYAGRWPFWLSPRQGIILTVQNDEPVLRLAEEAAAKIS--GYRSIDV 419

Query: 582 ------------------IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
                             I+ D  + +++ KI+     K  +I + G K  ++ SI +
Sbjct: 420 EATELLQPAPIASDPTFLIDVDSSSRSLSKKIQRAKSMKYNLIFVVGSKNLADNSIDV 477


>gi|46107732|ref|XP_380925.1| hypothetical protein FG00749.1 [Gibberella zeae PH-1]
          Length = 499

 Score =  326 bits (836), Expect = 6e-87,   Method: Composition-based stats.
 Identities = 143/475 (30%), Positives = 224/475 (47%), Gaps = 74/475 (15%)

Query: 234 YLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYE 292
           Y    E+ E  DHRKL  + +LF  +    G   +   G +IF  L+ ++R++     +E
Sbjct: 31  YSQKTEKREPPDHRKLGLQQELFISSIYSPGSPIFLPNGARIFNRLVDFLRKQYVRYGFE 90

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR------------------TF 334
           E+ TP +  + LW +SGH ++Y  +M+AV+   +                         +
Sbjct: 91  EVITPTIYKKSLWAKSGHLENYADDMYAVRGNTEPPPQHDGCCGSHQEYLKPEEEEEGDY 150

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
            LKPMNCPGH  +F     SYR+LPVR A+F  ++RNE SG+L GL RVR F QDD H+F
Sbjct: 151 GLKPMNCPGHCLIFASKRHSYRDLPVRYADFSPLHRNEISGALSGLTRVRRFHQDDGHIF 210

Query: 395 CTKEQMFNECLKIHNLIISIYK--DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
           C   Q+  E  K  + +  +Y    FG    +   +   +  +G++A WD AE+ +K  L
Sbjct: 211 CRPSQVEEEIKKTLDFVKVVYTVLRFGASYRLALSTRPKDHYIGTEAEWDQAESALKRAL 270

Query: 453 DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
           D         +  GV  G+GAFYGPK + +L D+ G+D Q  TIQ+DF LP RF   Y  
Sbjct: 271 DASG------MEWGVKEGDGAFYGPKIDIVLTDSDGKDHQTATIQLDFQLPKRFELEYQA 324

Query: 513 SHSEKC------------------HPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQ 554
              E                     PVMIHRAV GS+ER + ++IE + G  P WL+P Q
Sbjct: 325 PAPEYEARGETTEDPALLAEYGPVRPVMIHRAVLGSVERLMALLIEKYDGKWPFWLNPRQ 384

Query: 555 AIVTTITSS--AVEYAQEIANLL------------------------KSHHLSIETDFRN 588
           AIV T+ +S   +++A+ + ++L                        +   L+++ D   
Sbjct: 385 AIVLTVNTSTTVLDWAEHVRDVLVGQNKQFYEQLESGALPSSQDHAFRPTGLAVDVDTTA 444

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             +  KI+E        I++ G+ +   + + +   G        L + +  + +
Sbjct: 445 RPLGAKIKEARNNGYGQILVVGEDDVKNQQVAL---GKERLTPEDLRERLKTMVE 496


>gi|116180492|ref|XP_001220095.1| hypothetical protein CHGG_00874 [Chaetomium globosum CBS 148.51]
 gi|88185171|gb|EAQ92639.1| hypothetical protein CHGG_00874 [Chaetomium globosum CBS 148.51]
          Length = 758

 Score =  323 bits (827), Expect = 7e-86,   Method: Composition-based stats.
 Identities = 137/405 (33%), Positives = 208/405 (51%), Gaps = 46/405 (11%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
             +    G       G +IF  LI ++R++     ++E+ TP +  + LW +SGH ++Y 
Sbjct: 1   MTSVYSPGSPILLPNGARIFNRLIDFLRQQYVRYGFQEVITPTIYKKALWAKSGHLENYS 60

Query: 316 ANMFAVKCADD------TIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVY 369
            +M+ V              +   + LKPMNCPGH  +F    +SYR+LP+R A+F  ++
Sbjct: 61  DDMYTVTSTSPSRAEVTDRGEEAEYGLKPMNCPGHCLIFASQTRSYRDLPIRYADFSPLH 120

Query: 370 RNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
           RNE SG+L GL RVR F QDD H+FC   Q+ +E  K  + +   Y   G     + LST
Sbjct: 121 RNEISGALSGLTRVRRFHQDDGHIFCRPSQIRDEIAKTLDFVRLTYGVLGLGPYRLVLST 180

Query: 430 RPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGR 489
           RPE+ +GS+  W  AE+ ++  L         R+   +  G+GAFYGPK + ILKD+ G+
Sbjct: 181 RPEQYIGSEEDWTQAESALREAL------VGSRLQYTINPGDGAFYGPKIDIILKDSDGK 234

Query: 490 DWQCGTIQVDFNLPSRFNAFYVNSHSEKCH------------------PVMIHRAVFGSI 531
           + Q  TIQ+DF LP RFN  Y     E                     PV+IHRAV GS 
Sbjct: 235 EHQTATIQLDFQLPKRFNLEYTAPAPEFEKRGAITTDAELLAEYGPVQPVLIHRAVLGSA 294

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSS--AVEYAQEIANLLKS------------ 577
           ER + ++IE++KG  P WL+P QAIV T+ +S     +A++  ++L              
Sbjct: 295 ERLMALLIEHYKGKWPFWLNPRQAIVITVNNSEPVANWARQTRDILLGVSASTSTIEAAS 354

Query: 578 -HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
              L+I+ D  N  +  K+RE   K   +II  G ++   +++G+
Sbjct: 355 PTGLAIDIDDSNRGVELKVREAKTKGYGLIIGVGPRDVETKTVGV 399


>gi|255030614|ref|ZP_05302565.1| threonyl-tRNA synthetase [Listeria monocytogenes LO28]
          Length = 303

 Score =  322 bits (826), Expect = 8e-86,   Method: Composition-based stats.
 Identities = 115/305 (37%), Positives = 180/305 (59%), Gaps = 11/305 (3%)

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           + ++ + + SYRELP+R+AE G ++R E SG+L GL RVRG T +DAHVF   +Q+ +E 
Sbjct: 1   MMIYKNDIHSYRELPIRIAELGMMHRYEMSGALSGLQRVRGMTLNDAHVFVRPDQIKDEF 60

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQ 460
            ++  LI+ +YKDF       +LS R  K        DA+W+ A+ ++K  +D ++    
Sbjct: 61  KRVVELILEVYKDFDITDYSFRLSYRDPKNTEKYFDDDAMWEKAQAMLKSAMDEME---- 116

Query: 461 DRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHP 520
             ++     GE AFYGPK +  +K AIG++    T+Q+DF LP RF+  Y+    EK  P
Sbjct: 117 --MDYFEAEGEAAFYGPKLDVQVKTAIGKEETLSTVQLDFLLPERFDLTYIGEDGEKHRP 174

Query: 521 VMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHH 579
           V+IHR V  ++ERF+  +IE +KG  P WL+P+Q  +  +   + ++YA+ + + L+   
Sbjct: 175 VVIHRGVVSTMERFVAYLIEEYKGAFPTWLAPVQMEIIPVNADAHLDYAKGVQDKLQRAG 234

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
           L  E D RNE + YKIRE   KKIP  ++ GD+E    S+ +RR+GS  ++ + L   I 
Sbjct: 235 LRAEVDDRNEKLGYKIREAQTKKIPYALVLGDQEVEAGSVNVRRYGSKDSETMDLDAFIA 294

Query: 640 ILTKE 644
            +  E
Sbjct: 295 QVVAE 299


>gi|256274272|gb|EEU09179.1| Mst1p [Saccharomyces cerevisiae JAY291]
          Length = 429

 Score =  322 bits (824), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 126/402 (31%), Positives = 206/402 (51%), Gaps = 52/402 (12%)

Query: 247 RKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYM--RRKIKDDYEEINTPQVLDQHL 304
             +++  DLF       G +F+   G KIF  LI +M  ++K K  + E+ TP +  + L
Sbjct: 40  SMVSQRQDLFMTDPLSPGSMFFLPNGAKIFNKLIEFMKLQQKFKFGFNEVVTPLIYKKTL 99

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHW++Y  +MF V+  D+   +   + LKPMNCPGH  +F    +SY ELP+R ++
Sbjct: 100 WEKSGHWENYADDMFKVETTDE---EKEEYGLKPMNCPGHCLIFGKKDRSYNELPLRFSD 156

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           F  ++RNE SG+L GL R+R F QDD           N                      
Sbjct: 157 FSPLHRNEASGALSGLTRLRKFHQDDGRSGAESNYFIN---------------------- 194

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
              STRP+  +G   +W+ AE ++K +L+      +      +  G+GAFYGPK + ++ 
Sbjct: 195 --FSTRPDHFIGDLKVWNHAEQVLKEILEESGKPWK------LNPGDGAFYGPKLDIMVT 246

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D + +  Q  TIQ+DF LP RF+  + +  +    P+MIHRA FGSIERF+ ++I++ +G
Sbjct: 247 DHLRKTHQVATIQLDFQLPERFDLKFKDQDNSYKRPIMIHRATFGSIERFMALLIDSNEG 306

Query: 545 NLPLWLSPIQAIVTTITSS---AVEYAQEIANLLKSH--------------HLSIETDFR 587
             P WL+P QA++  + +     ++    +   L++               H +++ D R
Sbjct: 307 RWPFWLNPYQAVIIPVNTKNVQQLDMCTALQKKLRNEREADDMEPVPLNDWHFNVDLDIR 366

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           NE + Y+I+   +K    +II GD+E   +   IR   +  +
Sbjct: 367 NEPVGYRIKSAILKNYSYLIIVGDEEVQLQKYNIRERDNRKS 408


>gi|134100182|ref|YP_001105843.1| putative threonyl-tRNA synthetase [Saccharopolyspora erythraea NRRL
           2338]
 gi|291006599|ref|ZP_06564572.1| putative threonyl-tRNA synthetase [Saccharopolyspora erythraea NRRL
           2338]
 gi|133912805|emb|CAM02918.1| putative threonyl-tRNA synthetase [Saccharopolyspora erythraea NRRL
           2338]
          Length = 405

 Score =  320 bits (821), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 128/407 (31%), Positives = 197/407 (48%), Gaps = 20/407 (4%)

Query: 243 KRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
             DHRKL RE+ LF      G+G+ +W   G  +  TL  Y+R  + +  Y+ + +P + 
Sbjct: 1   MPDHRKLGRELGLFDSDPLIGAGLPYWLPDGALVRHTLEEYIRDAERRAGYQHVYSPVLG 60

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            + L++ SGHWD YR +MF                L+P  CP H  ++     SYRELP+
Sbjct: 61  KRELYEISGHWDHYRDDMFPPMRLG-----AEQVVLRPSLCPHHALIYRSRSHSYRELPL 115

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G +YR+E SG L GL RVR    +DAH+FCT EQ+  E      LI   Y   G 
Sbjct: 116 RMAELGGMYRSELSGVLGGLTRVRAIHLNDAHIFCTLEQVAEEAAAALELIRRAYDALGI 175

Query: 421 EKIMVKLSTRPE--KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
                +LS      K V +  +W  A  ++  VLD         +    + GE AFYGPK
Sbjct: 176 RAARYRLSLPGSGGKYVAAPRMWQRAAALLVDVLDRCG------VVYESVEGEAAFYGPK 229

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +  + D+ GR+    T+QVDF+ P RF+  Y+    ++  PVM+HR++ GS+ER +  +
Sbjct: 230 IDVQVADSAGREATLSTVQVDFHQPDRFDLHYIGGDGDRHRPVMVHRSIIGSVERAVAHL 289

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET--INYKIR 596
           +E   G  P WL+P Q +V  ++ +  E A+ +        L  E     E   +  +IR
Sbjct: 290 VELHGGAFPAWLAPTQLVVLPVSDAEAEQARALVRGCHERGLRAEV-AGPERGSLGARIR 348

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              +  +P   + G KEA+   + +R         +   D +  + +
Sbjct: 349 AARL--VPYQAVIGAKEAAAEEVALRLRDGRRLDSLPAADVLARIGE 393


>gi|302499120|ref|XP_003011556.1| hypothetical protein ARB_02109 [Arthroderma benhamiae CBS 112371]
 gi|291175108|gb|EFE30916.1| hypothetical protein ARB_02109 [Arthroderma benhamiae CBS 112371]
          Length = 533

 Score =  320 bits (821), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 130/420 (30%), Positives = 204/420 (48%), Gaps = 45/420 (10%)

Query: 259 AEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRAN 317
                G   +   G  I   LI+++R +  +  + E+ TP +  Q LW+ SGHW +Y+ +
Sbjct: 81  QSSRPGSPLFRPNGTHILNKLITFLRAQYKQYGFREVLTPNIYKQSLWEVSGHWQNYKDD 140

Query: 318 MFAVKCADDTIK-----DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE 372
           M+ V    DT +     +   + LKPMNCPGH  +F     SYRELPVR A+F  ++RNE
Sbjct: 141 MYEVGGRGDTGEASETSENEIYGLKPMNCPGHCLLFKSQKHSYRELPVRYADFSPLHRNE 200

Query: 373 PSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE--KIMVKLSTR 430
            SGSL GL RVR F QDD H+FC   Q+ +E         ++ + FG      +V  +  
Sbjct: 201 VSGSLSGLTRVRRFHQDDGHIFCRPGQIGSEIQLALKFADTVLQTFGLAEGYRLVLSTRP 260

Query: 431 PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRD 490
            +  +GS   W++AE  ++  LD         ++  +  G+GAFYGPK +  ++D+ G+ 
Sbjct: 261 EKDFIGSLEQWENAEQQLRQALD------NSGLSWELNEGDGAFYGPKIDLQIQDSQGKY 314

Query: 491 WQCGTIQVDFNLPSRFNAFYVNSHSEKCH---------PVMIHRAVFGSIERFIGIMIEN 541
            Q  TIQ+D NLP RF   Y+     + +         PV+IHRA+FGS+ERF  ++IE 
Sbjct: 315 HQLSTIQLDMNLPQRFELEYLVPEGSEEYDPATGGRATPVLIHRAIFGSLERFFALLIER 374

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH--------------------LS 581
           + G  P WLSP QAI+ TI     + A++    +                         +
Sbjct: 375 YNGQWPFWLSPRQAILLTIGKGIEQAAEDAVAKISGFEPITSSRPSSTGLPLSPLQPTFN 434

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           ++ D  + ++  KI +    +  ++ I G K  ++ S+ I    S      S  +   +L
Sbjct: 435 VDLDLASRSLPKKIHDAHAARYNLVFIMGPKNVADGSVDIDL--SGQVGGKSEDEIKALL 492


>gi|302653826|ref|XP_003018730.1| hypothetical protein TRV_07235 [Trichophyton verrucosum HKI 0517]
 gi|291182401|gb|EFE38085.1| hypothetical protein TRV_07235 [Trichophyton verrucosum HKI 0517]
          Length = 533

 Score =  320 bits (820), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 129/420 (30%), Positives = 202/420 (48%), Gaps = 45/420 (10%)

Query: 259 AEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRAN 317
                G   +   G  I   LI+++R +  +  + E+ TP +  Q LW+ SGHW +Y+ +
Sbjct: 81  QSSRPGSPLFRPNGTHILNKLITFLRAQYKQYGFREVLTPNIYKQSLWEVSGHWQNYKDD 140

Query: 318 MFAVKCADDTIK-----DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE 372
           M+ V    DT +     +   + LKPMNCPGH  +F     SYRELPVR A+F  ++RNE
Sbjct: 141 MYEVGGRGDTGETSDTSENEIYGLKPMNCPGHCLLFKSQKHSYRELPVRYADFSPLHRNE 200

Query: 373 PSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV--KLSTR 430
            SGSL GL RVR F QDD H+FC   Q+ +E         ++ + FG          +  
Sbjct: 201 VSGSLSGLTRVRRFHQDDGHIFCRPGQIGSEIQLALKFADTVLQTFGLADGYRLVLSTRP 260

Query: 431 PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRD 490
            +  +GS   W++AE  ++  LD         ++  +  G+GAFYGPK +  ++D+ G+ 
Sbjct: 261 EKDFIGSLEQWENAEQQLRQALD------NSGLSWELNEGDGAFYGPKIDLQIQDSQGKY 314

Query: 491 WQCGTIQVDFNLPSRFNAFYVNSHSEKCH---------PVMIHRAVFGSIERFIGIMIEN 541
            Q  TIQ+D NLP RF   Y+     + +         PV+IHRA+FGS+ERF  ++IE 
Sbjct: 315 HQLSTIQLDMNLPQRFELEYLVPEGSEEYDPATGGRATPVLIHRAIFGSLERFFALLIER 374

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH--------------------LS 581
           + G  P WLSP QAI+ TI     + A++    +                         +
Sbjct: 375 YNGQWPFWLSPRQAILLTIGKGLEQAAEDAVAKISGFEPITSSRPSSTGLPLSPLQPTFN 434

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           ++ D  + ++  KI +    +  ++ I G K  ++ S+ I    S      S  +   +L
Sbjct: 435 VDLDLASRSLPKKIHDAHAARYNLVFIMGPKNVADGSVDIDL--SGQVGGKSEDEIKALL 492


>gi|255732025|ref|XP_002550936.1| threonyl-tRNA synthetase [Candida tropicalis MYA-3404]
 gi|240131222|gb|EER30782.1| threonyl-tRNA synthetase [Candida tropicalis MYA-3404]
          Length = 1059

 Score =  320 bits (820), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 128/315 (40%), Positives = 174/315 (55%), Gaps = 13/315 (4%)

Query: 335  ALKPM---NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
            A +P    NCPGH  +F    +SYR+LP R+A+FG ++RNE SG+L GL RVR F QDDA
Sbjct: 736  ASRPTIVGNCPGHAVMFKSRERSYRDLPWRVADFGVIHRNEFSGALSGLTRVRRFQQDDA 795

Query: 392  HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
            H+FCT +Q+  E   + +L+  +Y  FGFE  M +LSTRPEK VG    W+ AE  ++  
Sbjct: 796  HIFCTADQIGTEIAGVFDLLKKMYGIFGFEFKM-ELSTRPEKYVGDLETWNGAEQKLEQA 854

Query: 452  LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
            LD      +  +N     G+GAFYGPK + ++ DA+ R +QC TIQ+DF LP RF   Y 
Sbjct: 855  LDEFLGKGKWELN----PGDGAFYGPKIDIMISDALKRWFQCATIQLDFQLPHRFELEYK 910

Query: 512  NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
                    PVMIHRA+ GS+ER   I+ E++KG  P WLSP Q ++  +     +YAQ +
Sbjct: 911  TDKGPTSRPVMIHRAILGSVERMTAILTEHYKGKWPFWLSPRQILIVPVGPKYYDYAQTL 970

Query: 572  ANLLKSHH-LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
               L   H    + D    T+  KIR   + K   I I GD+E    S+ +R       Q
Sbjct: 971  QKRLNDEHSFYCDVDVSGNTLPKKIRTGQMYKYNFIFIVGDEEEKSNSVNVRNRDIPEEQ 1030

Query: 631  K----VSLLDAIPIL 641
                 V + D I  L
Sbjct: 1031 GKNAMVKVDDVIQQL 1045



 Score =  304 bits (777), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 118/344 (34%), Positives = 190/344 (55%), Gaps = 15/344 (4%)

Query: 4   DIKLTFPDGSIKN-FPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
            IK+T  DGSIK       +  D+A SI +S A++ V   ++GK+ D+  P+  +  +E 
Sbjct: 66  PIKVTLKDGSIKEGTAYETSPMDIASSIGKSFAERQVIAKVDGKLWDMPRPLEGDAKLEF 125

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF---DKEQPFSSDE 118
           +  E P   AV  HS AHI+ EA +  +    +  GP  +DGF+YD    + E   +  +
Sbjct: 126 LDFEHPEGKAVFWHSSAHILGEACECHY-GCHLTHGPPTDDGFFYDMSINNGETAVTQAD 184

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
              +E+   + I     F +  L+ E+  E+F+  K   K  I + IP   + T+YR G 
Sbjct: 185 FPSLEQVATKAIKEKQKFERLELTKEQLLEMFKYNKYKIKF-ISDKIPDGTSTTVYRCGP 243

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLC GPH+  +G++K F K++K + +Y+ GDSN   L R+YG ++  ++ +T++L FL
Sbjct: 244 LIDLCVGPHIPQSGRIKAF-KVLKNSASYFLGDSNNDSLQRVYGISFPDKKLMTEHLKFL 302

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
            E+ +RDHRK+ +E +LF  +E   G   W   G +I+ TL+  +R + +   Y+E+ TP
Sbjct: 303 AEAAERDHRKIGKEQELFFFSEMSPGSAMWLPHGTRIYNTLVETLREEYRKRGYDEVITP 362

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
            +    LW+ SGHW +Y+ NMF+ +       +  TF LKPMNC
Sbjct: 363 NMYSTKLWETSGHWQNYKENMFSFEV------EKETFGLKPMNC 400


>gi|260896982|ref|ZP_05905478.1| threonine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
 gi|308087658|gb|EFO37353.1| threonine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
          Length = 290

 Score =  320 bits (820), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 132/275 (48%), Positives = 179/275 (65%), Gaps = 6/275 (2%)

Query: 370 RNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
           RNEPSG+LHG+MRVRGFTQDDAH+FCT+ Q+  E      ++   Y+ FGF+ I+VKLST
Sbjct: 12  RNEPSGALHGIMRVRGFTQDDAHIFCTESQIQEEVTSCIKMVYDTYQTFGFDNIVVKLST 71

Query: 430 RPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGR 489
           RPEKRVGSD +WD +E  +K  L++++      I   +  GEGAFYGPK E+ L D + R
Sbjct: 72  RPEKRVGSDEIWDQSEEALKQSLESME------IPYEIQEGEGAFYGPKIEFTLYDCLDR 125

Query: 490 DWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW 549
            WQCGT+Q+DFNLP R  A YV  ++E+  PVMIHRA+ GS+ERFIGI+IE + G  P W
Sbjct: 126 AWQCGTVQLDFNLPGRLGATYVGENNERLVPVMIHRAILGSLERFIGILIEEYAGFFPTW 185

Query: 550 LSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIIC 609
           L+P QA++  IT     Y QEI   L+   +  + D RNE I +KIREH++K++P +++ 
Sbjct: 186 LAPEQAVLMNITDKQSGYVQEIVQKLQKSGIRAKADLRNEKIGFKIREHTLKRVPYMLVV 245

Query: 610 GDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           GD+E     I +R        K  + D I  +  E
Sbjct: 246 GDQEMEAGEIAVRTRKGKDLGKFKVDDFIAYIQDE 280


>gi|42523294|ref|NP_968674.1| hypothetical protein Bd1807 [Bdellovibrio bacteriovorus HD100]
 gi|39575499|emb|CAE79667.1| thrS [Bdellovibrio bacteriovorus HD100]
          Length = 416

 Score =  319 bits (818), Expect = 8e-85,   Method: Composition-based stats.
 Identities = 135/409 (33%), Positives = 212/409 (51%), Gaps = 19/409 (4%)

Query: 243 KRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
           ++DHR+L + +  FH  E  G+G+  W   G  I   L    R  +    Y+ + +P + 
Sbjct: 15  QKDHRELNQYLSYFHSDESIGAGLPLWLPAGVVIRDELEKLARELEFLAGYQRVVSPHLA 74

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            + L+ QSGH   Y  +M+     ++       + L+PM CP H  +F+  L SYRELP+
Sbjct: 75  KEDLYHQSGHLPYYEDSMYPSMDLENV-----RYRLRPMCCPHHHKIFSAKLHSYRELPL 129

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RLAE+G VYR E SG+L GLMRVRG  Q+DAH++  + Q+  E  K+  +    Y+  G 
Sbjct: 130 RLAEYGQVYRYEGSGALSGLMRVRGLCQNDAHLYVRQNQVKVEIHKVLEMYQKAYRILGI 189

Query: 421 EKIMVKLSTRPEKRVGSDA-----LWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
               ++LS   E    S       LWD AE I++ VL       +  +      GE AFY
Sbjct: 190 SDYRLRLSRGVEAEEASQKYVANPLWDWAEGILREVL------VESGLPFFEAPGEAAFY 243

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK +  +    G++    T+QVDF    RF+  ++N    K  PV++HRA  GS ER +
Sbjct: 244 GPKIDVQIMSVHGKEESASTVQVDFISAERFDLSFINEEGHKERPVILHRAPLGSHERMV 303

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++IE ++G  PLWLSP Q  +  +     E A+ +  LL +  + +  D R E+++ K+
Sbjct: 304 ALLIELYQGAFPLWLSPEQVRIVPLADRHQEAAEGLRLLLHNSFIRVRVDDRAESLSRKM 363

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            E   +K+  +++ GDKE       ++R G++  Q VS  + + +L  E
Sbjct: 364 AECWQEKVHSVVVIGDKELQAGKFSLQRRGASA-QSVSAQELLSLLQNE 411


>gi|320586315|gb|EFW98994.1| threonyl-tRNA synthetase [Grosmannia clavigera kw1407]
          Length = 524

 Score =  319 bits (818), Expect = 8e-85,   Method: Composition-based stats.
 Identities = 137/451 (30%), Positives = 223/451 (49%), Gaps = 56/451 (12%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHR L  + +LF  +    G   +   G ++F  L+ ++R++     ++E+ TP +  + 
Sbjct: 76  DHRDLGVQQELFTTSIYSPGSPIFLPNGARVFNRLVDFLRKQYVRYGFQEVITPTIYKKA 135

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLR--------------TFALKPMNCPGHVAVFN 349
           LW +SGH ++Y  +MF V  A     + R               + LKPMNCPGH  +F 
Sbjct: 136 LWAKSGHLENYADDMFTVTSASLATGERRGEGGATPGPQDLEDEYGLKPMNCPGHCLIFA 195

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
               SYR+LP+R A+F  ++R+E SG+L GL RVR F QDD HVFC  +Q+  E     +
Sbjct: 196 AQRHSYRDLPIRYADFSPLHRDELSGALSGLTRVRRFHQDDGHVFCRPDQVEAEIRATLD 255

Query: 410 LIISIYKDFGFEKIMVKLSTRP--EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGV 467
            +   Y   G     + LSTRP     +G+   WD AE+ ++  LD   ++        V
Sbjct: 256 FVRHTYDVLGLGPYRLVLSTRPLDGHLIGTADDWDAAEDALRRALDHSHSAW------TV 309

Query: 468 LLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV------NSHSEKCHPV 521
             G+GAFYGPK + +L+D+ G++ Q  T+Q+DF LP RF   Y        +  E   PV
Sbjct: 310 SPGDGAFYGPKIDVVLRDSDGKEHQTATVQLDFQLPKRFALTYQEAVPKTKAEVEAARPV 369

Query: 522 MIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSS--AVEYAQEIANLLKSHH 579
           +IHRAV GS+ER + ++IE++ G  P WL+P Q  V T+  S   V +A+ +  +L    
Sbjct: 370 LIHRAVLGSVERLMALLIEHYDGRWPFWLNPRQVAVLTVNDSEPVVAFARHVQAVLNGTA 429

Query: 580 LS----------------IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRR 623
            +                ++ D    T+  K+RE   K    +++ G K+ +  ++ +  
Sbjct: 430 ETQDVPLGSLSAPTLLAAVDLDDSARTLPLKVREARSKGYGAVVVVGPKDVARGTVAVDL 489

Query: 624 FG---------STTTQKVSLLDAIPILTKES 645
            G         ST +  +   + + +L +++
Sbjct: 490 SGIPVQEQAERSTKSVDMKPEELLALLLQKA 520


>gi|298709340|emb|CBJ31276.1| ATP binding / tRNA ligase/ threonine-tRNA ligase [Ectocarpus
           siliculosus]
          Length = 470

 Score =  318 bits (814), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 168/378 (44%), Positives = 243/378 (64%), Gaps = 20/378 (5%)

Query: 53  PVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ 112
           P  EGS E++          IRH+ AH+MA AVQ ++P  QV IGP I++GFYYDF  E+
Sbjct: 97  PTNEGSPELLK---------IRHTSAHVMAMAVQRLFPGTQVTIGPWIDNGFYYDFYNEE 147

Query: 113 P-FSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENV 171
              +  +L +I+K+M +II +  P +++ ++ E+AR   E+  E +K+EIL+SI   E +
Sbjct: 148 TTMTDSDLKKIKKEMDKIIRQKLPLVREEVTREEARSRIEALGEPFKLEILDSIK-TEPI 206

Query: 172 TLYRQGE-WFDLCRGPHVRSTGQ-VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQ 229
           TLY  G+ W+DLC GPHV +TG   +K  +L  +AGAYWRGD NRP L RIYGTAW    
Sbjct: 207 TLYHVGDQWWDLCAGPHVETTGDLPQKGIELQTLAGAYWRGDENRPALQRIYGTAWENPA 266

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMR-RKI 287
           +L ++   + E+++RDHR L +++DLF + ED G G++FWH KG  I   + ++ + + +
Sbjct: 267 QLKEHKRRMVEAKRRDHRVLGKKLDLFSLQEDAGGGLVFWHPKGSTIRMLIENFWKAQHL 326

Query: 288 KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
              YE + TP V +  LW+ SGH+D Y+  MF          +   + +KPMNCP H  V
Sbjct: 327 DKGYELLYTPHVANLDLWKTSGHFDFYKDGMFDQMDV-----EGDQYQIKPMNCPFHCLV 381

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
           +   L+SYRELP+R AE G+VYR E SG+LHGLMRVRGFTQDDAH+FC  EQ+ +E + +
Sbjct: 382 YKDDLRSYRELPIRWAEMGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQLEDEIISV 441

Query: 408 HNLIISIYKDFGFEKIMV 425
            +L  +I   FGF++ + 
Sbjct: 442 LDLTEAILSRFGFDRRVW 459


>gi|156053914|ref|XP_001592883.1| hypothetical protein SS1G_05805 [Sclerotinia sclerotiorum 1980]
 gi|154703585|gb|EDO03324.1| hypothetical protein SS1G_05805 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 536

 Score =  317 bits (813), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 134/479 (27%), Positives = 217/479 (45%), Gaps = 50/479 (10%)

Query: 199 KLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR-DHRKLAREMDLFH 257
           K       YW    +      +  +  + +                 DHR+L  E +LF 
Sbjct: 17  KSTSQCSRYWAPKKSSNATIILTRSCASCESPSKVAKPTTTLPTPAADHRQLGIEQELFT 76

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRA 316
            +    G   +  KG ++F+ L  ++  +     +EE+ TP +  + LW++SGHW++Y  
Sbjct: 77  TSPYSPGSPLFLPKGARMFKALTEFLSAQYSHFGFEEVITPTIYKKSLWEKSGHWENYAE 136

Query: 317 NMFAVKCADDTIK-------DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVY 369
           +M++V     + +       +   + LKPMNCPGH  +F    +SYRE+P+R  +F  ++
Sbjct: 137 DMYSVIGRGASGETVEGQKGENEEYGLKPMNCPGHCLIFASKQRSYREMPIRYTDFSPLH 196

Query: 370 RNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD--FGFEKIMVKL 427
           RNE SG+L GL RVR F QDD H+FC   Q+  E  K    +   Y     G    +V  
Sbjct: 197 RNEISGALSGLTRVRRFHQDDGHIFCRPSQIKEEISKTLEFVKMTYSTLGLGMNYRLVLS 256

Query: 428 STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAI 487
           +   +  +G+   WD+AE  +K  LD             +  G+GAFYGPK + ILKD+ 
Sbjct: 257 TRPSDHYIGTKEEWDNAEKALKQSLDNSGR------EWTMNEGDGAFYGPKIDIILKDSD 310

Query: 488 GRDWQCGTIQVDFNLPSRFNAFYVNSHSE------------------KCHPVMIHRAVFG 529
           G++ Q  TIQ+DF LP RF   Y     E                     PV+IHRA+ G
Sbjct: 311 GKEHQTATIQLDFQLPKRFELEYQAPAPEIEAKGEITHDPILLAKQGPVTPVLIHRAILG 370

Query: 530 SIERFIGIMIENFKGNLPLWLSPIQAIVTTITSS----------AVEYAQEIANLLKSHH 579
           S+ER + ++IE++ G  P WL+P +  + T+  S            + A    + L    
Sbjct: 371 SVERMMALLIEHYNGRWPFWLNPSKVTILTVNDSEVVVKYAKVVKKQLAHHSHHNLFPRS 430

Query: 580 LSI-----ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
                   E D    ++  KI E   K+   II+ G++   ++++ +   G   ++ +S
Sbjct: 431 RHAVEIPIELDDSPRSLKKKISEAKRKRYGAIIVIGNQNVDDKTVTVDLSGIPESEHLS 489


>gi|171687735|ref|XP_001908808.1| hypothetical protein [Podospora anserina S mat+]
 gi|170943829|emb|CAP69481.1| unnamed protein product [Podospora anserina S mat+]
          Length = 514

 Score =  316 bits (810), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 143/430 (33%), Positives = 214/430 (49%), Gaps = 43/430 (10%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
           DHR L     LF  +    G  F+   G +IF  L+S++R +     +EE+ TP +  + 
Sbjct: 79  DHRTLGLHQKLFTTSIYSPGSAFFLPSGTRIFNRLVSFLRNQYVRYGFEEVITPLIYKKD 138

Query: 304 LWQQSGHWDSYRANMFAVK-----CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           LW +SGH ++Y  +M+ V        ++T +  R + LKPMNCPGH  +F+   +S+R+L
Sbjct: 139 LWAKSGHLENYAQDMYTVTGARHASPEETEETDREYGLKPMNCPGHCLIFSSQKRSFRDL 198

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+R A+F  ++RNE +GSL GL RVR F QDD H+FC   Q+  E  K    +   Y   
Sbjct: 199 PIRYADFSPLHRNENTGSLTGLTRVRRFHQDDGHIFCRPVQIEEEIKKSLEFVKHTYATL 258

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           G     + LSTRPE+ +GS   W++AEN +K  LD          +  V  G+GAFYGPK
Sbjct: 259 GLGPYRLALSTRPEQYIGSLEDWENAENALKRALDKSGT------DWTVNEGDGAFYGPK 312

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE------------------KCHP 520
            + +L+D+ G++ Q  TIQ+DF LP RF   Y+    E                     P
Sbjct: 313 IDIVLRDSHGKEHQTATIQLDFQLPKRFELEYIAPAPELEQKGETTTDPELLASFGPVRP 372

Query: 521 VMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVT--TITSSAVEYAQEIANLLKS- 577
           VMIHRAV GS+ER + ++IE++ G  PLWL+P Q  +     T   VE+A  +   L   
Sbjct: 373 VMIHRAVLGSVERLMALLIEHYDGKYPLWLNPNQIKIITLNDTEPVVEWATRVRERLLGI 432

Query: 578 -------HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRF---GST 627
                   H +++ D     I  K  E     + +++  G  E   +S+ +      GS 
Sbjct: 433 ADGDVTPTHFAVDLDTSARPIAVKKAEAVSAGVSVVVTIGASEVEGKSLSVDMSAVTGSR 492

Query: 628 TTQKVSLLDA 637
               +   + 
Sbjct: 493 KRVTMGPEEL 502


>gi|255066456|ref|ZP_05318311.1| threonine--tRNA ligase [Neisseria sicca ATCC 29256]
 gi|255049336|gb|EET44800.1| threonine--tRNA ligase [Neisseria sicca ATCC 29256]
          Length = 310

 Score =  316 bits (809), Expect = 8e-84,   Method: Composition-based stats.
 Identities = 133/302 (44%), Positives = 210/302 (69%), Gaps = 3/302 (0%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +T PDGS++ +    T + +A SI   LAK  VA  +NGK+ D  DP+  + +++II
Sbjct: 1   MLNITLPDGSVRQYESPVTVAQIAASIGAGLAKATVAGKVNGKLVDACDPITEDSTVQII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TP+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A I
Sbjct: 61  TPKDQEGVEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M+E+IA+D   +K      +  ++F+ + E YK+ ++E +P  E + +Y   E+ D+
Sbjct: 121 EARMKELIAQDYNVIKIMTPRAETIKIFQDRGEEYKLRLIEDMPEVEAMGMYHHQEYVDM 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           CRGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW T+ EL  Y+  +EE+E
Sbjct: 181 CRGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWATKDELKAYIQRIEEAE 239

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD 301
           KRDHRKL +++DLFH+ ++  G++FWH KGW ++QT+  +MR+++    Y+E+ TPQ++D
Sbjct: 240 KRDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQTIEQHMRKELNAAGYKEVKTPQIMD 299

Query: 302 QH 303
           ++
Sbjct: 300 KN 301


>gi|312601535|gb|ADQ90790.1| Threonyl-tRNA synthetase [Mycoplasma hyopneumoniae 168]
          Length = 370

 Score =  315 bits (808), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 130/373 (34%), Positives = 207/373 (55%), Gaps = 18/373 (4%)

Query: 274 KIFQTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           KI Q ++ + R      ++E+ TP    + L++ SGH   YR +MF          +   
Sbjct: 6   KIRQKILEFDR---NYGFKEVLTPHFGHKELYKISGHLLHYRDDMF-----KGLKIENEE 57

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
              +PM CP H+ +F+  L SYR LP R++E   +YR E SG+L GL RVR     + H+
Sbjct: 58  LIPRPMTCPHHIILFSQQLFSYRNLPYRISEQSRLYRYEKSGALLGLERVRAMDLTEGHI 117

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK----RVGSDALWDDAENIMK 449
           F +K Q+F+E   +  +I  +   F  +   +  S R  K        D +WD AE  +K
Sbjct: 118 FVSKSQIFSEISHLFQMISEVLDFFKVQIFYISFSKRDPKNKDKFFQDDQMWDQAEADLK 177

Query: 450 GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAF 509
             L+      Q++IN    +GE AFYGPK ++ +K A+ ++    T+Q+DF LP +F   
Sbjct: 178 QFLE------QNKINYIEKIGEAAFYGPKIDFQVKTALNKELTISTLQLDFLLPEKFKIS 231

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQ 569
           ++N H++K  P++IHR + G+ ERFI +++E  KGNLP W+SP Q IV  +     ++AQ
Sbjct: 232 FINEHNKKETPILIHRGLIGTYERFIALLLEQSKGNLPFWISPKQIIVIPVAEKHNDFAQ 291

Query: 570 EIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           +I  +L     + E D R+E I+ KIRE +++KI   +I GD+E ++  I  R+FGS   
Sbjct: 292 KIHKILFDLGFNSEIDLRSERISRKIREANLEKINFQVIIGDEEITKNEITYRKFGSPEL 351

Query: 630 QKVSLLDAIPILT 642
            ++SL+D + +L 
Sbjct: 352 FRISLVDFVDLLK 364


>gi|54309341|ref|YP_130361.1| putative threonyl-tRNA synthetase [Photobacterium profundum SS9]
 gi|46913777|emb|CAG20559.1| putative threonyl-tRNA synthetase [Photobacterium profundum SS9]
          Length = 325

 Score =  315 bits (807), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 139/324 (42%), Positives = 208/324 (64%), Gaps = 7/324 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS + F    +  DVA  I   LAK  +A  +NG+  D  D +  + S+
Sbjct: 1   MPV---ITLPDGSQRQFDNAVSTMDVAADIGPGLAKACIAGRVNGERVDACDLIENDASL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L +IRHSCAH++  A++ ++PE ++AIGP I++GFYYD D EQ  + D++
Sbjct: 58  AIITAKDEDGLEIIRHSCAHLLGHAIKQLYPEAKMAIGPTIDNGFYYDIDLEQSLTQDDV 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             IEK+M+E++      +K+ +S ++AR+ FE++ E YK+EIL E++   +   LY   E
Sbjct: 118 DAIEKRMKELVKTKYAVVKKKVSWQEARDAFEARGETYKIEILDENVSRDDRPGLYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D+CRGPHV + G  + F KL+ VAGAYWRGDS+  ML RIYGTA+  ++ L  +L  L
Sbjct: 178 YIDMCRGPHVPNMGFCQHF-KLLSVAGAYWRGDSDNKMLQRIYGTAFQDKKLLKAHLTRL 236

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
           EE+ KRDHR +   +DLFH+  +  G++FWH  GW IF+ L  ++R K+ K +Y+E+  P
Sbjct: 237 EEASKRDHRTIGEHLDLFHMQHESPGMVFWHHNGWTIFRELQLFIREKLTKYEYQEVKGP 296

Query: 298 QVLDQHLWQQSGHWDSYRANMFAV 321
            ++D+ LW++S HWD Y   MF  
Sbjct: 297 LMMDRVLWERSSHWDKYAHAMFTT 320


>gi|145593399|ref|YP_001157696.1| tRNA synthetase, class II (G, H, P and S) [Salinispora tropica
           CNB-440]
 gi|145302736|gb|ABP53318.1| tRNA synthetase, class II (G, H, P and S) [Salinispora tropica
           CNB-440]
          Length = 405

 Score =  314 bits (805), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 120/389 (30%), Positives = 200/389 (51%), Gaps = 17/389 (4%)

Query: 243 KRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVL 300
             DHR+L R++ LF        G+  W   G      +  Y+R  + +  Y+ + TP + 
Sbjct: 1   MIDHRRLGRDLGLFTSDPLAGAGLPLWLPAGAAARHAVEEYLRDLERQAGYQHVVTPPLG 60

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            + L+++SGH D +   MF        +       L+P  CP H  V+    +S+R+LP+
Sbjct: 61  RRELFERSGHLDHFAEEMFPPM----RLSADDELVLRPSLCPHHALVYRCRGRSWRDLPL 116

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+AE G +YR E SG L GL RVR  + +DAH FC  EQ+  E  +I  LI   +   G 
Sbjct: 117 RIAEMGGMYRAERSGVLGGLARVRAISLNDAHNFCALEQVGAEVAEILRLIRVAHAALGV 176

Query: 421 EKIMVKLSTRP--EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
                +LS R   ++ VG +  W  AE +++  LD         +     +G  AFYGPK
Sbjct: 177 RPAGFRLSLRGSGQRYVGEEDDWARAEELLRAALD--------GVEYTEDVGAAAFYGPK 228

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +  ++DA GR+W   T+Q+DF+ P RF+  Y++S   +  PV++HR++ GS+ER    +
Sbjct: 229 IDIQVEDAAGREWTLSTVQLDFDKPERFDLSYIDSGGARRRPVLVHRSLVGSMERLFSYL 288

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE  +G  P+W +P+Q +V  + ++    A E+    ++  L  E D R+ ++  +IR+ 
Sbjct: 289 IEVHEGAFPVWYAPVQLVVLPVAAAQDGAADEVVAAARAAGLRAEVD-RSGSLGGRIRDA 347

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGST 627
           +  +IP + + G +EA+   + +R     
Sbjct: 348 AQARIPYVAVVGPREAAAGHVLLRLRDGQ 376


>gi|296422769|ref|XP_002840931.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295637158|emb|CAZ85122.1| unnamed protein product [Tuber melanosporum]
          Length = 459

 Score =  310 bits (793), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 140/422 (33%), Positives = 203/422 (48%), Gaps = 43/422 (10%)

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD 301
             DHR LA   DL        G   +   G +IF  LIS++R +     YEE+ TP +  
Sbjct: 54  PPDHRLLAAAQDLLITHPVSPGSPLFLPHGSRIFNKLISFIRSQYTLYGYEEVITPTIYK 113

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH--GLKSYRELP 359
           + LW+ SGHW++Y  +MF V+           F LKPMNCPGH  +F H  G  S R+LP
Sbjct: 114 KSLWETSGHWENYNEHMFKVEA-------GEEFGLKPMNCPGHCLLFKHAAGKLSLRDLP 166

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           VR A+F  ++RNE SGSL GL RVR F QDDAH+FC   Q+  E       I ++YK F 
Sbjct: 167 VRYADFSPLHRNENSGSLSGLTRVRRFHQDDAHIFCRPSQISQEISSTLRFIQTVYKVFH 226

Query: 420 FEKIMVKLSTRPEK-RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
                ++LSTRP++  +GS   WD AE  +K  LD          +  +  G+GAFYGPK
Sbjct: 227 LPPYKLRLSTRPKEGYMGSLEEWDRAEAALKASLDKSGQ------DWAINEGDGAFYGPK 280

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI--- 535
            + IL D+ G++ Q  TIQ+DF LP R    Y         P    + +  +    +   
Sbjct: 281 IDTILTDSDGKEHQTATIQLDFQLPRRLGLNYFAP-----APAAEQKGILSTDPEQLKES 335

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           G +  ++ G  P WLSP QAIV  +  T   V YA+     +     +++ D     ++ 
Sbjct: 336 GFVTPHYNGKWPFWLSPRQAIVIPVAMTDEIVAYAR----AMSRRTFNVDIDESGGLLSR 391

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGI-----RRFG-------STTTQKVSLLDAIPIL 641
           K+R   IK    II+ G+K    +++ +     R              + +S+ +     
Sbjct: 392 KVRAARIKHYNYIIVVGEKNLQAKTVSLGSASPRHQEQGHEEGVEKGLKDMSVEEVYQKF 451

Query: 642 TK 643
            +
Sbjct: 452 VE 453


>gi|190348228|gb|EDK40650.2| hypothetical protein PGUG_04748 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 379

 Score =  308 bits (788), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 137/357 (38%), Positives = 202/357 (56%), Gaps = 15/357 (4%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDD 290
             Y   +  S   +H    ++  L+       G IF+   G +I   LI +M+ ++++  
Sbjct: 15  RHYSANVPSSTNTNHAISVKQQ-LYTTDPVTPGSIFFLPHGTRIMNKLIQFMKHQQMRYG 73

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVK---CADDTIKDLRTFALKPMNCPGHVAV 347
           +EE+ TP +    LW+ SGHWD+YR +MF V      +     L  + LKPMNCPGH  +
Sbjct: 74  FEEVITPLIYKNQLWKTSGHWDNYRDDMFKVTGNVVHEHEDPQLHEYGLKPMNCPGHCVI 133

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
           F+   +SY E P+RL++F S++RNE SG+L GL RVR F QDD H+FC  +Q+ +E    
Sbjct: 134 FSKFERSYNEFPIRLSDFSSLHRNEASGALSGLTRVRRFHQDDGHIFCEFDQVEDEISNT 193

Query: 408 HNLIISIYKDFGFEKIMVKL---STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            NLI+  YK FG     +K    +   +K +G  + W+ AE  +  VL    NS      
Sbjct: 194 VNLILESYKVFGIPSNEIKFTLSTRPEDKYIGEISTWEKAEEKLSNVLTNSGNSW----- 248

Query: 465 TGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC-HPVMI 523
             +  G+GAFYGPK +  L DA G+  Q GTIQ+DF LP+RF+  Y++ H  +   P+MI
Sbjct: 249 -TINPGDGAFYGPKIDVQLTDAFGKAHQVGTIQLDFQLPARFDLKYIDKHGSRENRPIMI 307

Query: 524 HRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHL 580
           HRAVFGS+ERF  I++++++G  P WL+P QA++  +  S V  AQEI   +   H 
Sbjct: 308 HRAVFGSLERFFAILLDHYQGKWPFWLNPRQALIIPVNDSHVSAAQEIKKQISGRHR 364


>gi|146413645|ref|XP_001482793.1| hypothetical protein PGUG_04748 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 379

 Score =  307 bits (787), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 138/357 (38%), Positives = 203/357 (56%), Gaps = 15/357 (4%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDD 290
             YL  +  S   +H    ++  L+       G IF+   G +I   LI +M+ ++++  
Sbjct: 15  RHYLANVPLSTNTNHAISVKQQ-LYTTDPVTPGSIFFLPHGTRIMNKLIQFMKHQQMRYG 73

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVK---CADDTIKDLRTFALKPMNCPGHVAV 347
           +EE+ TP +    LW+ SGHWD+YR +MF V      +     L  + LKPMNCPGH  +
Sbjct: 74  FEEVITPLIYKNQLWKTSGHWDNYRDDMFKVTGNVVHEHEDPQLHEYGLKPMNCPGHCVI 133

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
           F+   +SY E P+RL++F S++RNE SG+L GL RVR F QDD H+FC  +Q+ +E    
Sbjct: 134 FSKFERSYNEFPIRLSDFSSLHRNEASGALSGLTRVRRFHQDDGHIFCEFDQVEDEISNT 193

Query: 408 HNLIISIYKDFGFEKIMVKL---STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            NLI+  YK FG     +K    +   +K +G  + W+ AE  +  VL    NS      
Sbjct: 194 VNLILESYKVFGIPSNEIKFTLSTRPEDKYIGEISTWEKAEEKLSNVLTNSGNSW----- 248

Query: 465 TGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC-HPVMI 523
             +  G+GAFYGPK +  L DA G+  Q GTIQ+DF LP+RF+  Y++ H  +   P+MI
Sbjct: 249 -TINPGDGAFYGPKIDVQLTDAFGKAHQVGTIQLDFQLPARFDLKYIDKHGSRENRPIMI 307

Query: 524 HRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHL 580
           HRAVFGS+ERF  I++++++G  P WL+P QA++  +  S V  AQEI   +   H 
Sbjct: 308 HRAVFGSLERFFAILLDHYQGKWPFWLNPRQALIIPVNDSHVSAAQEIKKQISGRHR 364


>gi|229819712|ref|YP_002881238.1| tRNA synthetase class II (G H P and S) [Beutenbergia cavernae DSM
           12333]
 gi|229565625|gb|ACQ79476.1| tRNA synthetase class II (G H P and S) [Beutenbergia cavernae DSM
           12333]
          Length = 409

 Score =  307 bits (787), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 114/407 (28%), Positives = 192/407 (47%), Gaps = 16/407 (3%)

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQV 299
              DHR+L R++ LF  + +   G+  W   G  I   L ++ + + +      + TP +
Sbjct: 1   MTIDHRRLGRDLGLFATSAEVGAGLPLWLPDGAVIRGELEAFSLEQALASGCRRVYTPVL 60

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             + L+++SGHW  +   MF             +  L+P+NCP H  VF    +SYR+LP
Sbjct: 61  AKRSLFERSGHWAKFSGEMFPEMPLG-----GESLVLRPVNCPHHTQVFAAEGRSYRDLP 115

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
            RLAE GS++R+E SG + GL RVR    DDAH FC  +Q+ +E       I   Y   G
Sbjct: 116 FRLAEVGSMFRSELSGVVGGLSRVRQINLDDAHSFCAPDQVADEVALALRAIRHCYDVLG 175

Query: 420 FEKIMVKLSTRPEK--RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
            +    +LS R +    +G DA W  +E  ++  LD +       +    + GE A YGP
Sbjct: 176 IDVAYYRLSVRGDSGSYLGDDASWHRSERYLREALDELG------LPYERVEGEAAIYGP 229

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K +  + DA GR+    T+QVD  +P RF   Y      +  PV++HR +  S+ER   +
Sbjct: 230 KIDVQVADARGREETLSTVQVDEQMPGRFGLTYTGDDGARHRPVLVHRGLLSSMERMTAL 289

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           ++E   G +P WL+P+Q  V  +     + A  + + L    +  E    + ++  +IR+
Sbjct: 290 LVELHDGRMPTWLAPVQVRVLPVADRHADAAGALRDELARAGVRAEV-SHDGSLGRRIRD 348

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
              ++   + + GD E +  ++ +    +      ++   +  L  E
Sbjct: 349 ARERRDTYLAVLGDGELASGTVDVTAPATQVRAAPAVAAFVRELAAE 395


>gi|73981319|ref|XP_860710.1| PREDICTED: similar to threonyl-tRNA synthetase-like 1 isoform 3
           [Canis familiaris]
          Length = 304

 Score =  307 bits (787), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 114/298 (38%), Positives = 169/298 (56%), Gaps = 8/298 (2%)

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           +F H  +S+RELP+RLA+FG ++R E SGSL GL R+R F QDDAH+FC  +Q+  E   
Sbjct: 1   MFAHRPRSWRELPLRLADFGVLHRAEASGSLGGLTRLRCFQQDDAHIFCAPDQLEEEIQG 60

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
             + + S+Y   GF   +  LSTRP   +G   LWD AE +++  L+             
Sbjct: 61  CLDFLRSVYAVLGFSFRLA-LSTRPSGFLGESCLWDQAEQVLQRALEEFGEPWD------ 113

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
           +  G+GAFYGPK +  L DA+GR  QCGTIQ+DF LP RF+  Y         PV+IHRA
Sbjct: 114 LKPGDGAFYGPKIDVHLHDALGRPHQCGTIQLDFQLPLRFDLQYKGQAGVLERPVLIHRA 173

Query: 527 VFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD- 585
           V GS+ER +G++ E++ G  PLWLSP Q +V  + +   EYA+E    L++  L  + D 
Sbjct: 174 VLGSVERMLGVLAESYGGKWPLWLSPFQVVVIPVGAEQEEYAREAQQRLQAAGLVCDLDA 233

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
               T++ ++R   +       + G KE S++++ IR   +    +  L +A+  L +
Sbjct: 234 DSGLTLSRRVRRAQLAHYNFQFVVGQKEQSKKTVNIRTRDNRQLGERDLTEAVQRLLE 291


>gi|153824261|ref|ZP_01976928.1| threonyl-tRNA synthetase [Vibrio cholerae B33]
 gi|126518216|gb|EAZ75441.1| threonyl-tRNA synthetase [Vibrio cholerae B33]
          Length = 345

 Score =  307 bits (786), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 169/358 (47%), Positives = 244/358 (68%), Gaps = 15/358 (4%)

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLY 174
            ++L +IE +M E+       +K+ +S ++AR+ FES+ E+YK+EIL E++   +   LY
Sbjct: 1   QEDLEKIEARMVELAKTKYAVVKKKVSWQEARDTFESRGESYKMEILDENVARDDRPGLY 60

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
              E+ D+CRGPHV   G  + F KL+ +AGAYWRG+S+  ML RIYGTA++ ++ L  +
Sbjct: 61  HHEEYIDMCRGPHVPHMGFCQNF-KLLNIAGAYWRGNSDNKMLQRIYGTAFHDKKALQAH 119

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEE 293
           L  LEE+ KRDHRK+ +++DLFH+ ++  G++FWH  GW IF+ L  ++R+K+ +  Y+E
Sbjct: 120 LTRLEEAAKRDHRKIGKQLDLFHMQQEAPGMVFWHHNGWSIFRDLEIFIRQKLNEYGYQE 179

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           +  P ++D+ LW++SGHWD Y   MF       T  + R +A+KPMNCPGH+ +FN GLK
Sbjct: 180 VKGPLMMDRVLWERSGHWDKYADAMFT------TSSENREYAIKPMNCPGHIQIFNQGLK 233

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYR+LP+R+AEFGS +RNEPSGSLHG+MRVRGFTQDDAH+FCT++Q+  E      ++  
Sbjct: 234 SYRDLPLRMAEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTEDQIQQEVTSCIKMVYD 293

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
            Y  FGF+ I+VKLSTRPEKRVGSD +WD +E  +   L  +       I   +  GE
Sbjct: 294 TYTTFGFQNIVVKLSTRPEKRVGSDEIWDKSEQALIDSLKAM------DIPFEIQEGE 345


>gi|71899804|ref|ZP_00681954.1| TGS [Xylella fastidiosa Ann-1]
 gi|71730395|gb|EAO32476.1| TGS [Xylella fastidiosa Ann-1]
          Length = 332

 Score =  306 bits (784), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 143/333 (42%), Positives = 213/333 (63%), Gaps = 5/333 (1%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAING-KVCDLSDPVREGSI-EI 61
            I +T PDGS + F    +   VA +I   LAK  +A  I+G  + D SD +   +I  I
Sbjct: 1   MITITLPDGSRREFEGPVSVMQVAHAIGPGLAKATIAGQIDGGHLVDASDLIEHDAILRI 60

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           ITPED  +L +IRHSCAH++  AV+ ++PE ++ IGP+I DGFYYD   ++PF+ ++LA 
Sbjct: 61  ITPEDQEALEIIRHSCAHLVGHAVKQLYPEAKMVIGPVIADGFYYDIYSKRPFTPEDLAA 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESI-PAKENVTLYRQGEWF 180
           IE++M E+IA+D   +K   +      LF+ + E YK+ ++E + P    + +Y   E+ 
Sbjct: 121 IEQRMVELIAQDYDVVKHITARHDVVRLFKERGEDYKLRLIEDMGPEVTAMGIYHHQEYV 180

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           D+CRGPHV +T  +K F    +++GAYWRGD+    L RIYGTAW  +++L  Y+  L++
Sbjct: 181 DMCRGPHVPNTRFLKAFRLT-RISGAYWRGDTKNEQLQRIYGTAWADKKQLEAYMQRLQD 239

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQV 299
           +EKRDHRK+ +  DLFH+ E+G G++FWH KGW I+QT+ +Y+RR  ++  Y E+  PQ+
Sbjct: 240 AEKRDHRKIGKAQDLFHLQEEGPGLVFWHPKGWVIWQTIENYIRRVYRNSGYGELRCPQI 299

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           LD  LWQ+SGHWD+Y+ NMF       T    R
Sbjct: 300 LDVSLWQKSGHWDNYKENMFFTDSEKRTYAVNR 332


>gi|207742946|ref|YP_002259338.1| threonyl-trna synthetase protein [Ralstonia solanacearum IPO1609]
 gi|206594341|emb|CAQ61268.1| probable threonyl-trna synthetase protein [Ralstonia solanacearum
           IPO1609]
          Length = 268

 Score =  306 bits (783), Expect = 8e-81,   Method: Composition-based stats.
 Identities = 124/269 (46%), Positives = 170/269 (63%), Gaps = 6/269 (2%)

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
           +LHGLMRVRGF QDDAH+FCT+ Q+  E    ++L  S+Y+DFGFE + VKL+ RP+KR 
Sbjct: 1   ALHGLMRVRGFVQDDAHIFCTEGQIMAEAKDFNDLAFSVYEDFGFENVAVKLALRPDKRA 60

Query: 436 GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGT 495
           G+D +WD AE  ++  L          +    L GEGAFYGPK EY +KDAIGR WQCGT
Sbjct: 61  GTDEIWDHAEEGLRTALRACG------VEWEELPGEGAFYGPKVEYHIKDAIGRSWQCGT 114

Query: 496 IQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQA 555
           +Q+D  LP R  A YV   + +  PVM+HRA+ GS ERF+GI++EN  G LPLWL+P Q 
Sbjct: 115 LQLDLVLPERLGAEYVAEDNSRKRPVMLHRAILGSFERFLGILLENHAGALPLWLAPEQV 174

Query: 556 IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEAS 615
           +V +I  +  EYA+ +A  L+        D RNE I YKIREHS++K+P +++ GDKE  
Sbjct: 175 VVMSIADAHAEYAETVAQSLQKQGFRASADLRNEKITYKIREHSLQKVPYLVVVGDKERD 234

Query: 616 ERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
              + +R  G+     + +   +  L  +
Sbjct: 235 GNQVAVRARGNVDLGSMPVSAFVERLQND 263


>gi|318061953|ref|ZP_07980674.1| threonyl-tRNA synthetase [Streptomyces sp. SA3_actG]
          Length = 407

 Score =  305 bits (782), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 122/411 (29%), Positives = 195/411 (47%), Gaps = 16/411 (3%)

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
              DH +L R + L+        G+ +    G  +   L  Y+R  ++ D Y+ +++P +
Sbjct: 8   RDHDHHRLGRALGLYGTDPLLGAGLPYLLPDGASVRHALEEYVRGLEVADGYQHVHSPVL 67

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             Q L+ +SGHW  YRA+MF              F L+P  CP H  ++    +SYRELP
Sbjct: 68  GKQELYVRSGHWAHYRADMFPPMEVG-----GEHFVLRPSLCPHHALIYRAQARSYRELP 122

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R EPSG+L GL RVR    +DAH+FC  E +  E      LI + Y+  G
Sbjct: 123 LRIAELGGMFRAEPSGTLGGLTRVRAIHLNDAHLFCAPESLAGEVAGALALIRTAYRALG 182

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAEN-IMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
                 +LS       G DA +  AE    +      +  +   ++     GE AFYGPK
Sbjct: 183 LAPSRYRLSLP-----GEDAKYALAEGVWERSAAALAEALAGAGLDWEEERGEAAFYGPK 237

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +   +DA GR++   T+Q DF+ P+ F   Y  +   +  PVM+HR+V GS+ER +  +
Sbjct: 238 IDVQARDAAGREFTLSTVQADFHQPTAFGLDYRAADGSRPRPVMVHRSVLGSLERVLARL 297

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSI-ETDFRNETINYKIRE 597
           IE   G  P WL+P+Q  V  +     E A+      ++  L          T+  ++R+
Sbjct: 298 IEVHGGAFPAWLAPVQVGVVPVGEEQEEAAESFVRRCRAAGLRARRYPAHAGTLAARVRQ 357

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
             +  +P + + G +EA+   + +RR            +A+ +L   S  P
Sbjct: 358 ARL--VPHLAVLGAREAAAGEVALRRRDGERLPARPEAEAVALLVAGSGVP 406


>gi|309808038|ref|ZP_07701957.1| putative threonine--tRNA ligase [Lactobacillus iners LactinV
           01V1-a]
 gi|308168721|gb|EFO70820.1| putative threonine--tRNA ligase [Lactobacillus iners LactinV
           01V1-a]
          Length = 377

 Score =  305 bits (780), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 128/367 (34%), Positives = 210/367 (57%), Gaps = 12/367 (3%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS K F    T  ++A SI+ SLAK AVA  +N ++  L   V  +  + IIT +
Sbjct: 5   ITLPDGSKKEFNHALTIKEIASSIATSLAKSAVAGKVNDEIRPLDFVVDTDARVAIITDK 64

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L V+R++ A +        +P V++    + EDGF+ D DKE    + EL  +EK+
Sbjct: 65  DEEGLQVLRNTAAFVFEMVASKQYPSVRLGTSELEEDGFFVDTDKEDQIKASELPDLEKE 124

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           MQ+I+        + +S  +  +LF+   + YK+E+L+     + V +Y+  ++ D    
Sbjct: 125 MQKIVKNGEKIEYKIVSKSELLDLFK--DDPYKLELLKE--EADEVAVYKLEDFVDFGFN 180

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
             + +TG++K F KL+ VAGAYW+G S+ PML RI+GTA+  + +L   L   E+ ++RD
Sbjct: 181 ALLMNTGKLKHF-KLLSVAGAYWQGKSSNPMLQRIFGTAFFKEADLKADLQRREDIKERD 239

Query: 246 HRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQVLDQH 303
           HR + R++DLF +      G+ +W  KG  I + +  Y + +++ D Y+ + TP +++  
Sbjct: 240 HRTIGRDLDLFFVDPKVGAGLPYWMPKGATIRRVIERYIIDKEVADGYQHVYTPVLMNLD 299

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
            ++ SGHW  YR +MF          D     L+PMNCP H+ ++NH ++SYRELP+R+A
Sbjct: 300 AYKTSGHWAHYREDMFPPMDMG----DGEMLELRPMNCPSHIQIYNHHIRSYRELPIRIA 355

Query: 364 EFGSVYR 370
           E G ++R
Sbjct: 356 ELGMMHR 362


>gi|295839715|ref|ZP_06826648.1| threonine-tRNA ligase [Streptomyces sp. SPB74]
 gi|295827624|gb|EDY46892.2| threonine-tRNA ligase [Streptomyces sp. SPB74]
          Length = 425

 Score =  302 bits (773), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 117/430 (27%), Positives = 195/430 (45%), Gaps = 16/430 (3%)

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISY 282
                +     +     + + DH +L R + L+        G+ +    G  +   L  Y
Sbjct: 8   PSPAPRPAGATMNDPVPAPEHDHHRLGRALGLYGTDPLLGAGLPYLLPDGASVRHALEEY 67

Query: 283 MRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           +R  ++   Y+ +++P +  Q L+ +SGHW  YRA+                F L+P  C
Sbjct: 68  VRALEVAGGYQHVHSPVLGKQELYVRSGHWAHYRADTLPPMEVG-----GEHFVLRPGLC 122

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
           P H  ++    +SYR+LP+R+AE G ++R EPSG+L GL RVR    +DAH+FC  E + 
Sbjct: 123 PHHALIYRARARSYRDLPLRVAELGGMFRAEPSGTLGGLTRVRAIHLNDAHLFCAPESLA 182

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN-IMKGVLDTIKNSSQ 460
            E      LI + Y+  G      +LS       G  A +  AE    +      +  + 
Sbjct: 183 AEVAGALALIRTAYRALGLAPSRYRLSLP-----GEGAKYALAEGGWERAAAALAEALAA 237

Query: 461 DRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHP 520
             ++     GE AFYGPK +   +DA GR++   T+Q DF+ P+ F   Y  +   +  P
Sbjct: 238 SGLDWEEERGEAAFYGPKIDVQARDAAGREFTLSTVQADFHQPAAFGLDYRAADGSRPRP 297

Query: 521 VMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHL 580
           VM+HR+V GS+ER +  +IE   G  P WL+P+Q  V  +     E A+      ++  L
Sbjct: 298 VMVHRSVLGSLERVLARLIEVHGGAFPAWLAPVQVGVVPVGEEQEEAAESFVRRCRAAGL 357

Query: 581 SI-ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
                     T+  ++R   +  +P + + G +EA+   + +RR            +A+ 
Sbjct: 358 RARRYPAHAGTLAARVRRARL--VPHLAVLGAREAAAGEVALRRRDGERLPARPEAEAVA 415

Query: 640 ILTKESLPPD 649
           +L   S  P+
Sbjct: 416 LLVAGSAIPE 425


>gi|207343684|gb|EDZ71074.1| YKL194Cp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 358

 Score =  300 bits (769), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 118/328 (35%), Positives = 186/328 (56%), Gaps = 20/328 (6%)

Query: 247 RKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYM--RRKIKDDYEEINTPQVLDQHL 304
             +++  DLF       G +F+   G KIF  LI +M  ++K K  + E+ TP +  + L
Sbjct: 40  SMVSQRQDLFMTDPLSPGSMFFLPNGAKIFNKLIEFMKLQQKFKFGFNEVVTPLIYKKTL 99

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SGHW++Y  +MF V+  D+   +   + LKPMNCPGH  +F    +SY ELP+R ++
Sbjct: 100 WEKSGHWENYADDMFKVETTDE---EKEEYGLKPMNCPGHCLIFGKKDRSYNELPLRFSD 156

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG----- 419
           F  ++RNE SG+L GL R+R F QDD H+FCT  Q+ +E      LI  +Y         
Sbjct: 157 FSPLHRNEASGALSGLTRLRKFHQDDGHIFCTPSQVKSEIFNSLKLIDIVYNKIFPFVKG 216

Query: 420 ----FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                    +  STRP+  +G   +W+ AE ++K +L+      +      +  G+GAFY
Sbjct: 217 GSGAESNYFINFSTRPDHFIGDLKVWNHAEQVLKEILEESGKPWK------LNPGDGAFY 270

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           GPK + ++ D + +  Q  TIQ+DF LP RF+  + +  +    P+MIHRA FGSIERF+
Sbjct: 271 GPKLDIMVTDHLRKTHQVATIQLDFQLPERFDLKFKDQDNSYKRPIMIHRATFGSIERFM 330

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSS 563
            ++I++ +G  P WL+P QA++  + + 
Sbjct: 331 ALLIDSNEGRWPFWLNPYQAVIIPVNTK 358


>gi|148675291|gb|EDL07238.1| threonyl-tRNA synthetase-like 2, isoform CRA_a [Mus musculus]
          Length = 365

 Score =  300 bits (768), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 142/363 (39%), Positives = 207/363 (57%), Gaps = 12/363 (3%)

Query: 87  SIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEK 145
            ++    +  GP IE+GFYYD   E +  SS EL+ +E   + II    PF +  +S + 
Sbjct: 2   ELYYGGHLCYGPPIENGFYYDMFIEDRVVSSTELSALENICKTIIKEKQPFERLEVSKDT 61

Query: 146 ARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAG 205
             E+F+  K  +K  IL+        T+YR G   DLC+GPHVR TG++K   K+ K + 
Sbjct: 62  LLEMFKYNK--FKCRILKEKVDTPTTTVYRCGPLIDLCKGPHVRHTGKIK-AIKIFKNSS 118

Query: 206 AYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGV 265
            YW G+     L RIYG ++   + +  +  F EE++ RDHRK+ +E +LF   +   G 
Sbjct: 119 TYWEGNPEMETLQRIYGISFPDSKMMKDWEKFQEEAKSRDHRKIGKEQELFFFHDLSPGS 178

Query: 266 IFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCA 324
            F+  +G  I+  L+ ++R +    ++ E+ +P + +  LW+ SGHW  Y  NMF     
Sbjct: 179 CFFLPRGAFIYNALMDFIREEYHKRNFTEVLSPNMYNSKLWETSGHWQHYSNNMFTFDVE 238

Query: 325 DDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVR 384
            DT      FALKPMNCPGH  +F H  +S+RE+PVR A+FG ++RNE SG+L GL RVR
Sbjct: 239 KDT------FALKPMNCPGHCLMFAHRPRSWREMPVRFADFGVLHRNELSGTLSGLTRVR 292

Query: 385 GFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
            F QDDAH+FC  EQ+  E     + + S+Y  FGF   +  LSTRPE  +G   +WD+A
Sbjct: 293 RFQQDDAHIFCMVEQIEEEIKGCLHFLQSVYSTFGFSFQLN-LSTRPEHFLGEIEIWDEA 351

Query: 445 ENI 447
           E +
Sbjct: 352 ERV 354


>gi|224023751|ref|ZP_03642117.1| hypothetical protein BACCOPRO_00467 [Bacteroides coprophilus DSM
           18228]
 gi|224016973|gb|EEF74985.1| hypothetical protein BACCOPRO_00467 [Bacteroides coprophilus DSM
           18228]
          Length = 285

 Score =  299 bits (766), Expect = 8e-79,   Method: Composition-based stats.
 Identities = 117/283 (41%), Positives = 170/283 (60%), Gaps = 10/283 (3%)

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
           G+V R E SG LHGL RVR FTQDDAH+FC  +Q+ +E L++ ++I  ++K   FE    
Sbjct: 1   GTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKDEFLRVMDIISIVFKSMNFENFEA 60

Query: 426 KLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
           ++S R     EK +GSD  W+ AE  +    +      +  +   V  GE AFYGPK ++
Sbjct: 61  QISLRDKVNREKYIGSDENWEKAEQAIIEACE------EKGLPAKVEYGEAAFYGPKLDF 114

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
           ++KDAIGR WQ GTIQVD+NLP RF   Y+ S ++K  PVMIHRA FGS+ERF+ ++IE+
Sbjct: 115 MVKDAIGRRWQLGTIQVDYNLPERFQLEYMGSDNQKHRPVMIHRAPFGSMERFVAVLIEH 174

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             G  PLWL+P Q  +  ++    EYA  +   LK + +    D RNE I  KIR++ +K
Sbjct: 175 TAGKFPLWLTPDQVAILPVSEKYNEYADHVRLELKKNDIRAIVDDRNEKIGRKIRDNEMK 234

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +IP ++I G+KEA    + +R+ G      + + D    + +E
Sbjct: 235 RIPYMLIVGEKEAENEEVSVRKQGEGDQGTMKIEDFAKNIAEE 277


>gi|297294085|ref|XP_001089812.2| PREDICTED: threonyl-tRNA synthetase, cytoplasmic-like, partial
           [Macaca mulatta]
          Length = 400

 Score =  298 bits (762), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 130/290 (44%), Positives = 180/290 (62%), Gaps = 14/290 (4%)

Query: 283 MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
           +    K  ++E+ TP + +  LW  SGHW  Y  NMF+ +       +   FALKPMNCP
Sbjct: 93  LSEYRKRGFQEVVTPNIFNSRLWMTSGHWQHYSENMFSFEV------EKELFALKPMNCP 146

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN 402
           GH  +F+H  +S+RELP+RLA+FG ++RNE SG+L GL RVR F QDDAH+FC  EQ+ +
Sbjct: 147 GHCLMFDHRPRSWRELPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIED 206

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
           E     + + ++Y  FGF   +  LSTRPEK +G   +WD AE  ++  L+      +  
Sbjct: 207 EIKGCLDFLRTVYSVFGFSFKLN-LSTRPEKFLGDIEVWDQAEKQLENSLNEFGEKWE-- 263

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPV 521
               +  G+GAFYGPK +  +KDAIGR  QC TIQ+DF LP RFN  YV+    +K  PV
Sbjct: 264 ----LNSGDGAFYGPKIDIQIKDAIGRYHQCATIQLDFQLPIRFNLTYVSHDGDDKKRPV 319

Query: 522 MIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
           ++HRA+ GS+ER I I+ EN+ G  P WLSP Q +V  +  +  EYAQ++
Sbjct: 320 IVHRAILGSVERMIAILTENYGGKWPFWLSPRQVMVVPVGPTCDEYAQKV 369


>gi|282890618|ref|ZP_06299141.1| hypothetical protein pah_c022o225 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281499615|gb|EFB41911.1| hypothetical protein pah_c022o225 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 556

 Score =  297 bits (761), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 131/565 (23%), Positives = 243/565 (43%), Gaps = 24/565 (4%)

Query: 85  VQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHE 144
           ++ ++P VQ+    I + GFYYD    QP +   L  IE+++ ++        + ++  E
Sbjct: 2   LRDLFPNVQLVQSGINQVGFYYDCLFPQPVTETLLPLIEERLWQLCKNPPAIQEMHMMRE 61

Query: 145 KARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVA 204
            A   F+   +++  ++ E+   +  V L R  +++DL     +     ++    L    
Sbjct: 62  NAVHFFQHHGQSFHAQLAEN-AEENIVELIRMADFYDLYAETEIPDPTVIRAVKILSFSE 120

Query: 205 GAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSG 264
              +     +  + R++G A+  + E+  +L      +K  H  L +EM+LF  A   S 
Sbjct: 121 KEIYNASFGKLRVIRLFGAAFLQRDEMKVFLKKWTRHKKNQHVHLGQEMELFLPAGISSW 180

Query: 265 VIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVK 322
           V  W  +G  +   ++ +       + Y++I    +L    +  +       R   + V+
Sbjct: 181 V--WLPRGESLRAAVLKWCENGYAANGYQKIGMTGLLPLEHFSFKPSVEKKIREQSWIVE 238

Query: 323 CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMR 382
                 K+   + L P             L S+   P+R  E    +    S  L GL++
Sbjct: 239 ------KEEEEYVL-PSTQLSSAFFAASALCSF---PLRFFESEKRFSPAASDQLDGLLK 288

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWD 442
            +     +A++FC  EQ+ +E +     I    K FGFE     L  + EK   +   W 
Sbjct: 289 SQTCEMSNAYLFCLTEQVLHELISSLQFIEETVKVFGFEAQ-WYLYPKAEKNAAAKKQWP 347

Query: 443 DAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNL 502
            A   +   L          +N  V     ++ GP+ E  L D++ R W+   ++ D   
Sbjct: 348 QAIAFLHEALKFCH------LNYQVEEAFSSWRGPRIEVKLFDSLNRQWKGPQLEFDLFS 401

Query: 503 PSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITS 562
              F A    +   +  P +I     GS ER+I ++IE  +G LP WL+P Q  +  I  
Sbjct: 402 AESF-ALASQAKGLQSTPWVIRWTALGSTERWIALLIEQNEGRLPFWLAPEQVRIFPIGE 460

Query: 563 SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
             +EYA++I  L+ + +L +  D R   +  KI + + +++P ++I GDKE  E  + +R
Sbjct: 461 KVIEYAKKIQVLMLNQNLRVAIDKRQHPLAEKIYDATRQRVPYLVIVGDKEERENRLTVR 520

Query: 623 RFGSTTTQK-VSLLDAIPILTKESL 646
            F   T +  V + D + +L+KE+L
Sbjct: 521 SFDDKTAKTDVEIKDFLALLSKENL 545


>gi|290559258|gb|EFD92597.1| Anticodon-binding domain protein [Candidatus Parvarchaeum
           acidophilus ARMAN-5]
          Length = 329

 Score =  295 bits (756), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 124/314 (39%), Positives = 195/314 (62%), Gaps = 10/314 (3%)

Query: 329 KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQ 388
           +    +ALKPMNCP    +F    +SYRELP+RL+++G ++R E  G+L GL R R   Q
Sbjct: 8   ESEEEYALKPMNCPFSAILFKSKTRSYRELPMRLSDYGFLHRYELEGTLDGLFRTRLMEQ 67

Query: 389 DDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIM 448
           +D+HV+  ++Q+ +E +++ +++   Y  F  + I+ KL+TRPEKR+G + LWD AE I+
Sbjct: 68  NDSHVYVMEDQIESEMMRMFDIMDDTYNPFDLKPII-KLATRPEKRIGDEELWDKAEKIL 126

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRD---WQCGTIQVDFNLPSR 505
           K  LD      +   N  +  G+GAFYGPK +    D  G+    +   TIQ+DFNL  R
Sbjct: 127 KETLD------KRGYNYEIKEGDGAFYGPKIDIYALDFSGKPEDAYAVSTIQLDFNLAVR 180

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAV 565
           F+A Y+ S +++  P++IHR++ GSI RF+GI++EN KG+LP W+SP+Q  V TIT    
Sbjct: 181 FDAKYIGSDNKEHFPIVIHRSIMGSIGRFMGIILENSKGDLPFWISPVQVRVLTITEKNA 240

Query: 566 EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
           +YA+ +   LK + + ++++  + T+ YKIR+  ++KIP III G KE  + +I +R   
Sbjct: 241 KYAENVIKKLKENGIRVDSELDSGTLEYKIRKGQLEKIPYIIIIGSKEEEKNTISVRNRK 300

Query: 626 STTTQKVSLLDAIP 639
             T   + L + I 
Sbjct: 301 GKTDYNIDLDEFIS 314


>gi|332967802|gb|EGK06905.1| threonine--tRNA ligase [Desmospora sp. 8437]
          Length = 279

 Score =  295 bits (756), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 137/292 (46%), Positives = 192/292 (65%), Gaps = 14/292 (4%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYR 315
             +E+  G+ F+  KG  I   L S+ R+ + +  Y+E+ TP +++Q LW+QSGHWD YR
Sbjct: 1   MFSEEAPGMPFYLPKGMTIRNELESFSRKLQKEAGYQEVRTPLMMNQRLWEQSGHWDHYR 60

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            NM+       T  D   F++KPMNCPGH+ VF HG++SYR+LP+RLAEFG V+R+E SG
Sbjct: 61  ENMYF------THVDETAFSIKPMNCPGHMLVFKHGIRSYRDLPLRLAEFGQVHRHELSG 114

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
           +LHG+ RVR FTQDDAH+F   +Q+  E      L+  IY  FGF    V+LSTRPE  +
Sbjct: 115 ALHGMFRVRTFTQDDAHIFVRPDQIEAEVQAAMQLVDRIYSVFGF-PYTVELSTRPEDSM 173

Query: 436 GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGT 495
           GS+ LW+ AE  +K VLD      Q  +   +  GEGAFYGPK ++ ++DA+ R  QC T
Sbjct: 174 GSEQLWNQAETALKNVLD------QSGVEYRINEGEGAFYGPKIDFHIRDALKRSHQCAT 227

Query: 496 IQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           IQ+DF +P +F+  YV   + +  PV+IHRA+FGSI+RFIG+++E+  G  P
Sbjct: 228 IQLDFQMPEKFDLSYVGEGNGRHRPVVIHRAIFGSIDRFIGVLVEHTGGAFP 279


>gi|326331281|ref|ZP_08197573.1| threonine--tRNA ligase [Nocardioidaceae bacterium Broad-1]
 gi|325950914|gb|EGD42962.1| threonine--tRNA ligase [Nocardioidaceae bacterium Broad-1]
          Length = 411

 Score =  295 bits (754), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 124/406 (30%), Positives = 190/406 (46%), Gaps = 12/406 (2%)

Query: 242 EKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQV 299
              DHR L R++ +F      GSG+  W   G  +F  L        +      + TP +
Sbjct: 1   MNLDHRDLNRDLAIFATDPLAGSGLPLWLPDGAVVFAELEQLAADLARADGCVPVKTPVL 60

Query: 300 LDQHLWQQSGHWDSYRANMFAVK-CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
             + L+++SGHW  +  +MF        +  +     L+P NCP H  V+     SYREL
Sbjct: 61  GKRALFERSGHWAKFADDMFPPMAVGSGSAGEEDDLVLRPANCPHHALVYRARPHSYREL 120

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           PVRL E   ++R E SG L GL RVR    DD HVFC  +Q+  E  K  +  +      
Sbjct: 121 PVRLHELAPMFRAERSGVLSGLSRVRQINLDDTHVFCRPDQVAEEAAKALSSALRAQDIL 180

Query: 419 GFEKIMVKLSTRP--EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           G     V+LS R      +GS   W  AE  ++        +S+  +      GE AFYG
Sbjct: 181 GLRVDYVRLSLRDSSPSYLGSAEQWHGAEGALRKA------ASEAGVEVVEAPGEAAFYG 234

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK +  + D  G +    T+QVDFN P RF+  Y  +   +   VM+HR   GS+ER   
Sbjct: 235 PKLDLQVVDPRGHEETIATVQVDFNQPERFDLTYDAADGSRQRVVMVHRGTVGSMERVTA 294

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
            ++E ++G LPLWL+P+Q  V  ++SS    A+ + + L +  L    D    ++  +IR
Sbjct: 295 AVLERYQGRLPLWLAPVQLAVLPVSSSQDRAARALVDALVAEGLRPRLDPEG-SLGARIR 353

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           E   ++ P+I + G  EA    + +R   +   ++V   D +  + 
Sbjct: 354 ESRRRREPLIAVIGAVEAEAGEVQVRDVAAGVERRVGAADLVEAVK 399


>gi|299471018|emb|CBN78879.1| threonine--tRNA ligase [Ectocarpus siliculosus]
          Length = 704

 Score =  293 bits (750), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 117/417 (28%), Positives = 201/417 (48%), Gaps = 58/417 (13%)

Query: 4   DIKLTFPDGSIK-NFPVHATGSDVAESISRSLAKKAVAVAI----------------NG- 45
           +I +  PDG+ K       T  D+A+ IS++LAK+ V   +                +G 
Sbjct: 113 EISVVLPDGTEKKGVSYETTPMDIAKGISKNLAKEVVVAEVRYSSRIEDDEQNVSSADGM 172

Query: 46  --------------------------KVCDLSDP-VREGSIEIITPEDPRSLAVIRHSCA 78
                                     ++ D+  P +    + ++  ED  +  V  HS A
Sbjct: 173 EAEGSDEEEEGGGCGHDHGDKEDASAELWDMLRPLIGNCRLRLLKFEDKEAQTVFWHSSA 232

Query: 79  HIMAEAVQSIWPEVQVAIGPIIEDGFYYDF-DKEQPFSSDELAQIEKKMQEIIARDSPFL 137
           H +  A++       +  GP +++GF+YD           +L  ++K++         F 
Sbjct: 233 HCLGFALEKKL-GCHLTHGPPVDNGFFYDCYMGGSAVGEKDLKDLDKEVTRCCKAKQTFD 291

Query: 138 KQYLSHEKARELFESKKEAYKVEILE-SIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKK 196
           +  L+ E+A ++      A+K E +   IP   + T+YR G++ DLCRGPHV  +  ++ 
Sbjct: 292 RLVLTKEEALDM--FDYNAFKKEYINTRIPDGGSTTVYRNGDFVDLCRGPHVPYSTMIQA 349

Query: 197 FFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLF 256
           F   ++ +   W G      L R+YG A+ ++ ++ ++  F E+++KRDHR++  + DLF
Sbjct: 350 FN-SIRTSSTNWLGKVTNDPLQRVYGVAFPSKDQMKKFNEFQEQAKKRDHRRVGVQQDLF 408

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYR 315
                  G  F+   G +I+  L+ ++R +     YEE+ TP + +  LW+QSGH   Y+
Sbjct: 409 FFHPLSPGSAFFLPHGTRIYNRLMEFIRSEYWKRGYEEVTTPNMYNMDLWEQSGHAAHYK 468

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE 372
             MF          + + F LKPMNCPGH  +F+ G+KS+RELP+R A+FG ++RNE
Sbjct: 469 DAMFRF------PVEGQEFGLKPMNCPGHCIMFSQGVKSWRELPLRYADFGVLHRNE 519



 Score =  157 bits (396), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 55/184 (29%), Positives = 85/184 (46%), Gaps = 25/184 (13%)

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK-----------------------CH 519
           + DA+ R  QC T+Q+DF LP RFN  Y     E                          
Sbjct: 520 VFDAMERVHQCATVQLDFQLPIRFNLKYSAGTEEHGDAKPEAAKPAEGGGSEAKPAGEKR 579

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH 579
           PVMIHRA+ GS+ER I ++ E++ G  P WLSP QA++  +     +YA  + + L +  
Sbjct: 580 PVMIHRAMLGSLERMIAVLTEHYGGKWPFWLSPRQALIVPVAQKYNDYATNVKDRLHNAG 639

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
             ++ +  N+T+N K+RE    K   I++ G+ E     + +R  G    +   L+    
Sbjct: 640 FYVDVETSNKTLNKKVREGVTAKYNYILVVGEAEEEADEVNLR--GKGQQKVSDLMQMFQ 697

Query: 640 ILTK 643
            LT 
Sbjct: 698 DLTD 701


>gi|196230369|ref|ZP_03129231.1| threonyl-tRNA synthetase [Chthoniobacter flavus Ellin428]
 gi|196225299|gb|EDY19807.1| threonyl-tRNA synthetase [Chthoniobacter flavus Ellin428]
          Length = 692

 Score =  292 bits (747), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 116/361 (32%), Positives = 177/361 (49%), Gaps = 17/361 (4%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL----RTFALKPMNCPGHVAV 347
            E    +       QQ G           +    D  K        + LK MNCP H  +
Sbjct: 329 MEAEFEEFFRAIPEQQFGDASKIALERLFLDMGIDEAKSKIAPPDRYYLKAMNCPHHHKL 388

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
           F    +SYR+LP+RLAE+G+ YR E SG L GLMRVR    +DAH++CT+EQ  +E   +
Sbjct: 389 FAAVPRSYRDLPLRLAEYGTCYRYEQSGELFGLMRVRSMQMNDAHIYCTEEQFESEFRAV 448

Query: 408 HNLIISIYKDFGFEKIMVKLSTRPEKRVG-----SDALWDDAENIMKGVLDTIKNSSQDR 462
           + + +  +  FG +K +++ ST    ++G     +  LW   E++++GVL          
Sbjct: 449 NEMYLKYFAIFGIDKYVMRFSTHDPAKLGQKFVDNSELWLKTEDMVRGVLQRTG------ 502

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
           IN   +  E AFYGPK +  +  AIGR++   T QVDF +P+RF   Y +  +    P+ 
Sbjct: 503 INFIEVPNEAAFYGPKIDVQVWSAIGREFTIATNQVDFAVPARFGLTYKDRDNTSKTPLC 562

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA--VEYAQEIANLLKSHHL 580
           IHRA  G+ ERF+G +IE++ GN PLWLSP Q  V  I      V YA+ I   L++  +
Sbjct: 563 IHRAPLGTHERFVGFLIEHYAGNFPLWLSPEQVRVLPIGDEEPLVNYAKAIQAELRAAGV 622

Query: 581 SIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
               D  ++ I  KI      K+  +++ G ++    ++ +R  G          + I  
Sbjct: 623 RANLDSSSDPIKAKIASAEQMKVHTMLVLGHRDLEAGNVSVRVHGKGNLGAKPRAEVIAD 682

Query: 641 L 641
           L
Sbjct: 683 L 683



 Score =  200 bits (508), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 97/279 (34%), Positives = 149/279 (53%), Gaps = 14/279 (5%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           L  +RHS AH++A A+  IWPE Q A GP +E+GFYYD +     S D+  +IE++M++ 
Sbjct: 17  LERLRHSAAHVLATAILRIWPEAQFAAGPPVENGFYYDLEMPHRISPDDFLKIEEEMKKE 76

Query: 130 IARDSPFLKQYLSHEKAREL---------FESKKE--AYKVEILESIPAKENVTLYRQGE 178
           I  +  F +  +S ++A  L          E       +K+  L  IP  E ++LY+ G+
Sbjct: 77  IKANHVFERTAVSRDEAIALANSGRLGGLSERPGNVSKFKIGNLADIPEGEEISLYKNGD 136

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + DLC GPHV  TG +  F     VA AY++GD   P L RIYGTA+  + E+  Y   L
Sbjct: 137 FLDLCAGPHVMRTGNIGAFRLT-SVASAYYKGDEKNPQLQRIYGTAFKNKTEMEAYFTML 195

Query: 239 EESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINT 296
           EE++KRDHRKL +E++LF   +D G G+  W  +G  + + L    +  +    Y+ + T
Sbjct: 196 EEAKKRDHRKLGKELELFCFDDDVGPGLPLWLPRGTVLIEELEKLAKETEFAGGYDRVRT 255

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFA 335
           P +  ++++  SGH   Y  +MF      +  K    F 
Sbjct: 256 PVLARENMYLTSGHLPYYAESMFPPMELREDAKGSEGFI 294


>gi|154295615|ref|XP_001548242.1| hypothetical protein BC1G_13078 [Botryotinia fuckeliana B05.10]
 gi|150843958|gb|EDN19151.1| hypothetical protein BC1G_13078 [Botryotinia fuckeliana B05.10]
          Length = 442

 Score =  292 bits (747), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 132/418 (31%), Positives = 201/418 (48%), Gaps = 50/418 (11%)

Query: 275 IFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAV-------KCADD 326
           +F+ L  ++  +     +EE+ TP +  + LW++SGHW++Y  +M++V       +    
Sbjct: 1   MFKALTEFLSAQYSHFGFEEVITPTIYKKSLWEKSGHWENYAEDMYSVVGRGASGETIGG 60

Query: 327 TIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
              +   + LKPMNCPGH  +F    +SYRE+PVR  +F  ++RNE SG+L GL RVR F
Sbjct: 61  QKGENEEYGLKPMNCPGHCLIFASKQRSYREMPVRYTDFSPLHRNEISGALSGLTRVRRF 120

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP-EKRVGSDALWDDAE 445
            QDD H+FC   Q+  E       +  +Y   G     + LSTRP +  +G+   WD+AE
Sbjct: 121 HQDDGHIFCRPSQIGKEISGTLEFVRMVYTTLGLGPYRLALSTRPSDHYIGTKEEWDNAE 180

Query: 446 NIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSR 505
             +K  LD             +  G+GAFYGPK + ILKD+ G++ Q  TIQ+DF LP R
Sbjct: 181 TALKQSLDKSGQPW------TMNEGDGAFYGPKIDVILKDSDGKEHQTATIQLDFQLPKR 234

Query: 506 FNAFYVNSHSE------------------KCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           F   Y     E                     PV+IHRA+ GS+ER + ++IE++ G+ P
Sbjct: 235 FELEYQAPAPEIEAKGETTDDPILLAKQGPVAPVLIHRAILGSVERMMALLIEHYNGHWP 294

Query: 548 LWLSPIQAIVTTITS--SAVEYAQEIANLLKSHHLS--------------IETDFRNETI 591
            WL+P + I+ T+      V YA  +   L                    IE D    ++
Sbjct: 295 FWLNPSKVIILTVNDSEEVVSYANRVKMQL-GQGAYHDSWPKSRHSIEVPIELDDSPRSV 353

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPD 649
             KI E   K+   II+ G+K     ++ +   G    + +     I  + KE +  D
Sbjct: 354 KKKISEAKRKRFGAIIVIGNKNVENNTVTVDLSGIPRGEHLGSSRDIREVLKEDIISD 411


>gi|145529361|ref|XP_001450469.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124418080|emb|CAK83072.1| unnamed protein product [Paramecium tetraurelia]
          Length = 769

 Score =  292 bits (746), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 138/359 (38%), Positives = 205/359 (57%), Gaps = 14/359 (3%)

Query: 161 ILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRI 220
           ++         T Y+ G   DLC GPH+ +T  VK F    K + AYW G +    L R+
Sbjct: 85  LIHLRDKGAMTTAYKCGNLIDLCTGPHLPNTSYVKAFQVT-KNSAAYWLGKNTNDDLQRV 143

Query: 221 YGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLI 280
           YG ++ +++ L +Y+   +E   RDHR + ++ +L+   +   G  F++  G  I+ TL+
Sbjct: 144 YGVSFPSKKLLDEYVKIQKELALRDHRNVGKKQNLYLFHQLSPGSAFFYPSGAHIYNTLM 203

Query: 281 SYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPM 339
           +++RR+     Y+E+ +P + +  LW+ SGH+D Y+ N+F +      + +   + LKPM
Sbjct: 204 NFLRRQYYIRGYQEVISPNIFNAQLWKISGHYDKYKENLFFI-----NMGEEGEYGLKPM 258

Query: 340 NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQ 399
           NCPGH  +F+    SYR+LPVR A+FG ++RNE  G+L GL RVR F QDDAH+FC  +Q
Sbjct: 259 NCPGHCLMFDMIQHSYRDLPVRFADFGVLHRNEVHGALSGLTRVRRFQQDDAHIFCRMDQ 318

Query: 400 MFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSS 459
           +  E     + +  IY  FGFE  +  LSTRPEK +G+  +WD+AE  ++  L       
Sbjct: 319 IQEEIKSCLDFLSYIYSLFGFEFKL-YLSTRPEKFLGTKEVWDNAEYQLEQGLKKFGKP- 376

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC 518
                  V  G+GAFYGPK +  L DA  R+ QCGTIQ+DFNLP RFN  Y  S   + 
Sbjct: 377 -----FEVNPGDGAFYGPKIDVKLYDAYKREHQCGTIQLDFNLPERFNLQYRASEDVQE 430



 Score =  121 bits (302), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 43/148 (29%), Positives = 77/148 (52%), Gaps = 7/148 (4%)

Query: 504 SRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSS 563
            ++   Y +  +    PV++HRA+ GS+ER I ++ E   G  P WLSP Q ++  +++ 
Sbjct: 541 KKYELGYHHLKAGFARPVIVHRAILGSLERMIAVLTEQCGGKWPFWLSPKQLVLCPVSAY 600

Query: 564 AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRR 623
             + A++IA  L+    ++ TD  ++T+  K+R   I+    + + G++E     I +R 
Sbjct: 601 YKDVAEKIAARLRLEGYTVTTDEADQTLAKKVRNAQIQYFNFVGVIGEEEVKAGVIDVRD 660

Query: 624 -FGSTTTQKVSLLDAIPILTK--ESLPP 648
              +T   K++    IP L K  ESL P
Sbjct: 661 CEKNTRIGKLT----IPQLCKFFESLKP 684


>gi|325990107|ref|YP_004249806.1| threonyl-tRNA synthetase [Mycoplasma suis KI3806]
 gi|323575192|emb|CBZ40857.1| Threonyl-tRNA synthetase [Mycoplasma suis]
          Length = 425

 Score =  290 bits (742), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 112/412 (27%), Positives = 197/412 (47%), Gaps = 12/412 (2%)

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEINTPQ 298
              DHR + +   LF+ +++ GSG  FW  +G+K+ + +  Y+    +D      + TP 
Sbjct: 14  CSCDHRAVGKNKGLFYFSKEIGSGFSFWASEGYKLREIIKRYINDFQRDICGINLVQTPI 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    ++Q++GH   Y  N+F         K+   + L+PM CP H+ +    + SY++L
Sbjct: 74  LGKTEIYQKTGHLPLYDENIFPAM-----KKEGEEWILRPMTCPHHILLAKEVIMSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P  + E   ++R E SG L GL RVR     D H+F   E   +        + ++   F
Sbjct: 129 PYLMGENSCLHRYEYSGGLLGLKRVRAMELIDTHIFVLPEHCEDMIKSSLEWVWTLLNKF 188

Query: 419 GFEKIMVKLSTR--PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
                 + L+TR   +K + S   W+  E I+         S    ++     GE AFYG
Sbjct: 189 RIRIKEIVLATRSSKQKYLISGDEWNQTEEILFSATKEWIKSKNISVSLVRKEGEAAFYG 248

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK ++   D+  +++   T+Q+D  +P +     ++++    +P +IH  + G++ERFI 
Sbjct: 249 PKIDFNAVDSSNQEFTISTVQLDSQMPKKLEFSILDANQNSINPWIIHLGLIGTLERFIA 308

Query: 537 IMIENFKGNLPLWLSPIQAIVTTI-TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++E++ G LP WL P Q  + T+   S+    +E+     S+    + D R+E I+ KI
Sbjct: 309 YLLEDWGGKLPFWLLPTQISILTVRIDSSRPELKELIKKFSSYGFRAKLDLRDERISKKI 368

Query: 596 REHSIKKIPIIIICGDKEASE-RSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
                ++IP  II G+KE      I  R  G    +++S  D I  L++E +
Sbjct: 369 VNAVNERIPFQIIIGEKELQNLDLINFRELGKEGEKQLSFSDFINYLSQEEI 420


>gi|295704482|ref|YP_003597557.1| threonyl-tRNA synthetase [Bacillus megaterium DSM 319]
 gi|294802141|gb|ADF39207.1| threonyl-tRNA synthetase [Bacillus megaterium DSM 319]
          Length = 296

 Score =  288 bits (738), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 135/307 (43%), Positives = 197/307 (64%), Gaps = 14/307 (4%)

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEE 293
           +    E+EKR+H+KL +E++LF   E+  G+ F+   G  +   L +Y  ++  K  Y+E
Sbjct: 1   MSKQMEAEKRNHQKLGQELELFMSMEEAPGMPFFLPNGMIVRNELENYWKQKHYKAGYQE 60

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           I TP ++ Q LW+QSGHW+ Y  NM+       +  D + +A+KPMNCPG + +FN   +
Sbjct: 61  IKTPIMMKQELWEQSGHWEHYHENMYF------SNVDKQNYAIKPMNCPGAILLFNSKRR 114

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SYRELPVR AE G V+R+E SGSL+GL+RVR FTQDDAH+F    Q+  E  +I   I  
Sbjct: 115 SYRELPVRYAELGLVHRHELSGSLNGLLRVRSFTQDDAHLFVELSQIEAEISRILAFIHD 174

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
            Y  FGF+   V+LSTRPEK +G    W+ AE  ++ VL       +  ++  V  G+GA
Sbjct: 175 FYSHFGFDY-KVELSTRPEKFMGDIETWNQAEKSLQSVLI------EKGLDYQVNEGDGA 227

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK ++ + D++GR WQCGT+Q+DF +P +F+  Y+   ++   PVMIHRA++GS+ER
Sbjct: 228 FYGPKIDFHILDSLGRSWQCGTVQLDFLMPEKFDCMYIGEDNKPHRPVMIHRAIYGSVER 287

Query: 534 FIGIMIE 540
           F+ I+IE
Sbjct: 288 FMAILIE 294


>gi|297850190|ref|XP_002892976.1| hypothetical protein ARALYDRAFT_472010 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338818|gb|EFH69235.1| hypothetical protein ARALYDRAFT_472010 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 458

 Score =  287 bits (735), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 112/335 (33%), Positives = 170/335 (50%), Gaps = 15/335 (4%)

Query: 312 DSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRN 371
             Y   +           D   F     +        NH      ELP+R+A+FG ++RN
Sbjct: 128 QEYGCKLC---IGPCKTIDEGFFCDAFYHGE-LGLNDNHFPNIEAELPIRMADFGVLHRN 183

Query: 372 EPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP 431
           E SG+L G+ RVR F QDDAH+FC  +Q+  E   + + I  +YK FGF   + KLST  
Sbjct: 184 EESGALSGMTRVRRFVQDDAHIFCRVDQVGEEVKGVLDFIDYVYKIFGFTYEL-KLSTPE 242

Query: 432 EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDW 491
           +K +G    WD AE  ++  LD             +  G+GAFYGPK +  + DA+ R +
Sbjct: 243 KKYIGDLETWDKAEKDLEKALDNFGKPW------VINKGDGAFYGPKIDITVSDAMKRKF 296

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLS 551
           QC T+Q+DF LP+ F   Y+   +EK  PVMIHRAV GSIER   I++E++KG  P WLS
Sbjct: 297 QCATLQLDFQLPACFKLKYITKKNEKERPVMIHRAVLGSIERMFAILLEHYKGIWPFWLS 356

Query: 552 PIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
           P QAIV +++     YA+++   ++     ++ D  + +I  K+ +        I++ G 
Sbjct: 357 PRQAIVCSLSEDYSSYAKQVQKQIQEAGYYVDIDESDRSICKKVADARAAPYNYILVVGQ 416

Query: 612 KEASERSIGIRRF----GSTTTQKVSLLDAIPILT 642
           KEA+   + +R      G     ++S+   +    
Sbjct: 417 KEATTGQVTVRLREDPAGRKDLPEMSIDSLLDEFK 451



 Score =  115 bits (287), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 35/130 (26%), Positives = 64/130 (49%), Gaps = 8/130 (6%)

Query: 3   SDIKLTF-PDGSIKNF-PVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
             IK+T  PDG +K       T  D+A  IS+  AK A+  +++  + D++ P+  + S+
Sbjct: 41  DPIKITLLPDGIVKEGKRWETTPMDIAVQISKGFAKSALVSSVDHVLWDMNRPLEGDCSL 100

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP--IIEDGFYYD--FDKEQPFS 115
           EI   +  +      HS A I+  A++  +   ++ IGP   I++GF+ D  +  E   +
Sbjct: 101 EIFGFDSDQGRDTFWHSSALILGHALEQEY-GCKLCIGPCKTIDEGFFCDAFYHGELGLN 159

Query: 116 SDELAQIEKK 125
            +    IE +
Sbjct: 160 DNHFPNIEAE 169


>gi|325973664|ref|YP_004250728.1| threonyl-tRNA synthetase [Mycoplasma suis str. Illinois]
 gi|323652266|gb|ADX98348.1| threonyl-tRNA synthetase [Mycoplasma suis str. Illinois]
          Length = 424

 Score =  286 bits (731), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 111/412 (26%), Positives = 194/412 (47%), Gaps = 12/412 (2%)

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEINTPQ 298
              DHR + +    F+ +++ GSG  FW  +G+K+ + +  Y+    +D      + TP 
Sbjct: 13  CSCDHRTVGKNKGFFYFSKEIGSGFSFWASEGYKLREIIKRYINDFQRDICGINLVQTPI 72

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    ++Q++GH   Y  N+F         K+   + L+PM CP H+ +    + SY++L
Sbjct: 73  LGKTEIYQKTGHLPLYDENIFPAM-----KKEGEEWILRPMTCPHHILLAKEVIMSYKQL 127

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P  + E   ++R E SG L GL RVR     D H+F   E   +        + ++   F
Sbjct: 128 PYLMGENSCLHRYEYSGGLLGLKRVRAMELIDTHIFVLPEHCKDMIKSSLEWVWTLLNKF 187

Query: 419 GFEKIMVKLSTR--PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
                 + L+TR   +K + S   W+  E I+         S    ++     GE AFYG
Sbjct: 188 RIRIKEIVLATRSSKQKYLISGDEWNQTEEILFSATKEWIASKNISVSLVRKEGEAAFYG 247

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           PK ++   D+  +++   T+Q+D  +P +     + ++    +P +IH  + G++ERFI 
Sbjct: 248 PKIDFNAVDSSNQEFTISTVQLDSQMPKKLEFSILYANQNSINPWIIHLGLIGTLERFIA 307

Query: 537 IMIENFKGNLPLWLSPIQAIVTTI-TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++E++ G LP WL P Q  + T+   S+     E+     S+    + D R+E I+ KI
Sbjct: 308 YLLEDWGGKLPFWLLPTQISILTVRIDSSRHELNELIKKFSSYGFRAKLDLRDERISKKI 367

Query: 596 REHSIKKIPIIIICGDKEASE-RSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
                ++IP  II G+KE      I  R  G    +++S  D I  L++E +
Sbjct: 368 VNAVNERIPFQIIIGEKELQNLDLINFRELGKEGEKQLSFSDFINYLSQEEV 419


>gi|212223522|ref|YP_002306758.1| threonyl-tRNA synthetase [Thermococcus onnurineus NA1]
 gi|229558459|sp|B6YTH4|SYT_THEON RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|212008479|gb|ACJ15861.1| Threonyl-tRNA synthetase [Thermococcus onnurineus NA1]
          Length = 627

 Score =  286 bits (731), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 102/457 (22%), Positives = 192/457 (42%), Gaps = 32/457 (7%)

Query: 206 AYWRGDSNRPMLSRIYGTAWNTQQELTQY-----LYFLEESEKRDHRKLAREMDLFHI-A 259
           +YW   +    L  +    +   + L ++             +  H ++  E +L     
Sbjct: 164 SYWYILTPEGELIEVDKFDFTGHENLRKFANYEISKSRIADREPPHVRIMLEQELVDYEP 223

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANM 318
               G + ++ KG  I   L  Y+  K+ +    E+ TP + D        + + + A  
Sbjct: 224 GSDPGNLRYYPKGRLIKGLLEQYVTEKVVEYGAMEVETPIMYDFEHPALEKYLNRFPARQ 283

Query: 319 FAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV-YRNEPSGSL 377
           + VK  D      + F L+   C G   +    + SYR LP+R+ E     +R E SG L
Sbjct: 284 YIVKSGD------KKFFLRFAACFGQFLIKKDAIISYRNLPLRMYELTRYSFRREKSGEL 337

Query: 378 HGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
            GL R+R FT  D H      +Q   E  K + L + + K  G      +++ R      
Sbjct: 338 SGLRRLRAFTMPDMHTVARDLKQAMAEFKKQYKLSMEVLKGVGLTPEDYEVAIRF----- 392

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
           ++  W++  + +  +   I       +   +      ++  KFE+   D + +     T+
Sbjct: 393 TEDFWNENRDFIVELAKIIGKP----VLIEMWKQRFFYFILKFEFNFVDNLDKAAALSTV 448

Query: 497 QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE--------NFKGNLPL 548
           Q+D     RF   Y +   ++ +P+++H +  G+IER +  ++E          K   PL
Sbjct: 449 QIDVENAERFGITYYDEDGKEKYPLILHCSPSGAIERVMYAILEKQAKLQSKGIKPMFPL 508

Query: 549 WLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIII 608
           WLSPIQ  V  ++   ++YA  +A  L+   + ++ D  ++ +N KIR+   + IP +I+
Sbjct: 509 WLSPIQVRVIPVSEEVLDYALYVAGKLEGAKIRVDVDDTSDRLNKKIRKAEKEWIPYVIV 568

Query: 609 CGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
            G  E  + +I +RR       ++ L D I  +  ++
Sbjct: 569 VGRNEKEQNTITVRRRSDGKQGEMQLEDLIREIRSQT 605


>gi|240103065|ref|YP_002959374.1| threonyl-tRNA synthetase [Thermococcus gammatolerans EJ3]
 gi|259516771|sp|C5A5J8|SYT_THEGJ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|239910619|gb|ACS33510.1| Threonyl-tRNA synthetase (thrS) [Thermococcus gammatolerans EJ3]
          Length = 626

 Score =  285 bits (729), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 104/464 (22%), Positives = 197/464 (42%), Gaps = 32/464 (6%)

Query: 199 KLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL-----YFLEESEKRDHRKLAREM 253
           K  K   +YW   +    L  +    +   + L +++            +  H +L  E 
Sbjct: 156 KEEKELVSYWYILTPEGELIEVDKFDFTGHENLRKFVNYEIAKNRIADREPPHVRLMLEH 215

Query: 254 DLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHW 311
           +L        +G + ++ KG  I   L  Y+  K+ +    E+ TP + D        + 
Sbjct: 216 ELVDYEPGSDAGNLRYYPKGRLIKGLLEQYVTEKVVEYGAMEVETPIMYDFEHPALEKYL 275

Query: 312 DSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV-YR 370
           + + A  + VK  D      + F L+   C G   +    + SYR LP+R+ E     +R
Sbjct: 276 NRFPARQYIVKSGD------KKFFLRFAACFGQFLIKKDAIISYRNLPLRMYELTRYSFR 329

Query: 371 NEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
            E SG L GL R+R FT  D H      +Q  +E  K + L + + +  G      +++ 
Sbjct: 330 REKSGELSGLRRLRAFTMPDMHTVAKDLKQAMDEFKKQYKLSMEVLRGVGLTPDDYEVAI 389

Query: 430 RPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGR 489
           R      +   W+  ++ +  +   I       +   +      ++  KFE+   D + +
Sbjct: 390 RF-----THDFWEANKDFIVELAKIIGKP----VLIEMWDQRFFYFILKFEFNFVDNLDK 440

Query: 490 DWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE--------N 541
                T+Q+D     RF   Y +   ++ +P+++H +  G+IER +  ++E         
Sbjct: 441 AAALSTVQIDVENAERFGITYYDEEGKERYPLILHCSPSGAIERVMYAILEKQAKLQAQG 500

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            K   PLWLSPIQ  V  ++   ++YA  +A  L+   + ++ D  N+ +N KIR+   +
Sbjct: 501 KKPMFPLWLSPIQVRVIPVSDDVLDYALYVAGKLEGAKIRVDVDDTNDRLNKKIRKAEKE 560

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
            +P II+ G  E  + ++ +RR       ++ L D I  + +++
Sbjct: 561 WVPYIIVVGKNEKEQNTVTVRRREDGKQVEMQLEDLIREIRQKT 604


>gi|254172046|ref|ZP_04878722.1| threonyl-tRNA synthetase [Thermococcus sp. AM4]
 gi|214033942|gb|EEB74768.1| threonyl-tRNA synthetase [Thermococcus sp. AM4]
          Length = 624

 Score =  285 bits (728), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 105/464 (22%), Positives = 193/464 (41%), Gaps = 32/464 (6%)

Query: 199 KLMKVAGAYWRGDSNRPMLSRIYGTAWN-----TQQELTQYLYFLEESEKRDHRKLAREM 253
           K  K   +YW   +    L       +       +    +        ++  H KL  E 
Sbjct: 154 KEEKELVSYWYILTPEGELIEADKFDFTGHENLRKFVSYEIHKNRIADKEPPHVKLMLEH 213

Query: 254 DLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHW 311
           +L         G + ++ KG  I   L  Y+  K+ +    E+ TP + D        + 
Sbjct: 214 ELVDYEPGSDGGNLRYYPKGRLIKGLLEQYVTEKVVEYGAMEVETPIMYDFEHPALEKYL 273

Query: 312 DSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV-YR 370
           + + A  + VK  D      + F L+   C G   +    + SYR LP+R+ E     +R
Sbjct: 274 NRFPARQYIVKSGD------KKFFLRFAACFGQFLIKKDAIISYRHLPLRMYELTRYSFR 327

Query: 371 NEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
            E SG L GL R+R FT  D H      +Q  +E  K + L + + +  G      +++ 
Sbjct: 328 REKSGELSGLRRLRAFTMPDMHTVAKDLKQAMDEFKKQYKLSMEVLRGVGLTPDDYEVAI 387

Query: 430 RPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGR 489
           R  +       W++  + +  +   I       +   +      ++  KFE+   D + +
Sbjct: 388 RFTR-----DFWEENRDFIVELAKIIGKP----VLIEMWDQRFFYFILKFEFNFVDNLDK 438

Query: 490 DWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE--------N 541
                T+Q+D     RF   Y +   ++ +P+++H +  G+IER +  ++E         
Sbjct: 439 AAALSTVQIDVENAERFGITYYDEEGKERYPLILHCSPSGAIERVMYAILEKQAKLQAQG 498

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            K   PLWLSPIQ  V  ++   ++YA  +A  L+   + ++ D  N+ +N KIR+   +
Sbjct: 499 KKPAFPLWLSPIQVRVIPVSDDVMDYALYVAGKLEGAKIRVDVDDTNDRLNKKIRKAEKE 558

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
            IP II+ G  E  + ++ +RR       ++ L D I  + +++
Sbjct: 559 WIPYIIVVGKNEKEQNTVTVRRREDGKQLEMQLEDLIREIRQKT 602


>gi|14590578|ref|NP_142646.1| threonyl-tRNA synthetase [Pyrococcus horikoshii OT3]
 gi|8928366|sp|O58430|SYT_PYRHO RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|3257107|dbj|BAA29790.1| 625aa long hypothetical threonyl-tRNA synthetase [Pyrococcus
           horikoshii OT3]
          Length = 625

 Score =  283 bits (724), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 107/467 (22%), Positives = 192/467 (41%), Gaps = 32/467 (6%)

Query: 194 VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY-----LYFLEESEKRDHRK 248
            +   K      +YW   +    L  +    +   + L ++            ++  H K
Sbjct: 150 PEALKKEETELVSYWYILTPEGELIEVDKFDFTGYENLRKFANYEISKSRIAEKEPPHVK 209

Query: 249 LAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ 306
           L  E +L         G + ++ KG  I   L  Y+  K+ +    E+ TP + D     
Sbjct: 210 LMLEHELVDYEPGSDPGNLRYYPKGRLIKSLLEQYVTEKVIEYGAMEVETPVMYDFEHPA 269

Query: 307 QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFG 366
              + + + A  + V   D      + + L+   C G   +    + SYR LP+R+ E  
Sbjct: 270 LEKYLNRFPARQYIVLSGD------KKYFLRFAACFGQFLISKDAVISYRHLPLRMYELT 323

Query: 367 SV-YRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIM 424
              +R E  G L GL R+R FT  D H      EQ  +E  K   L + + K  G     
Sbjct: 324 RYSFRREKRGELSGLRRLRAFTMPDMHTLAKDLEQAKDEFKKQFKLSMEVLKGVGLTPED 383

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
            +++ R      ++  W +  + +  ++  I       +   +      ++  KFE+   
Sbjct: 384 YEVAIRF-----TEDFWKENRDFIVELVKIIGKP----VLIEMWKQRFFYFILKFEFNFV 434

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE---- 540
           D + +     T+Q+D     RF   Y + + E+ +P+++H +  G+IER +  ++E    
Sbjct: 435 DNLDKAAALSTVQIDVENAERFGIKYYDENGEEKYPLILHCSPSGAIERVMYAILEKQAK 494

Query: 541 ----NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                 K  LPLWLSPIQ  V  ++   ++YA  IA  L+   + ++ D  +E +N KIR
Sbjct: 495 LMQEGKKPMLPLWLSPIQVRVIPVSEEYLDYALYIAGKLEGARIRVDVDDEDERLNKKIR 554

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
               + IP I++ G KE    +I +RR       +  L + I  + +
Sbjct: 555 RAEKEWIPYIVVVGAKEKESGTITVRRREDGKQYETRLEELIKEIKE 601


>gi|14521542|ref|NP_127018.1| threonyl-tRNA synthetase [Pyrococcus abyssi GE5]
 gi|14548274|sp|Q9UZ14|SYT_PYRAB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|5458761|emb|CAB50248.1| thrS threonyl-tRNA synthetase [Pyrococcus abyssi GE5]
          Length = 625

 Score =  282 bits (722), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 102/469 (21%), Positives = 195/469 (41%), Gaps = 32/469 (6%)

Query: 194 VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL-----YFLEESEKRDHRK 248
            +   K  +   +YW   +    L  +    +   + L +++           ++  H K
Sbjct: 150 PEALRKEEEELVSYWYILTPEGELIEVDKFDFTGYENLRKFVNYEIAKNRIAEKEPPHVK 209

Query: 249 LAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ 306
           L  E +L         G + ++ KG  I   L  Y+  K+ +    E+ TP + D     
Sbjct: 210 LMLEHELVDYEPGSDPGNLRYYPKGRLIKSLLEQYVTEKVIEYGAMEVETPIMYDFEHPA 269

Query: 307 QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFG 366
              + + + A  + V   D      + + L+   C G   +    + SYR LP+R+ E  
Sbjct: 270 LEKYLNRFPARQYIVLSGD------KRYFLRFAACFGQFMIKKDAIISYRNLPLRMYELT 323

Query: 367 SV-YRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIM 424
              +R E  G L GL R+R FT  D H      EQ   E  K   L + + +  G     
Sbjct: 324 RYSFRREKRGELSGLRRLRAFTMPDMHTLAKDIEQAKEEFKKQFKLSMEVLEGVGLTPED 383

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
            +++ R      ++  W + ++ +  ++  I       +   +      ++  KFE+   
Sbjct: 384 YEVAIRF-----TEDFWKEHKDFIVELVKLIGKP----VLIEMWKQRFFYFILKFEFNFV 434

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE---- 540
           D + +     T+Q+D     RF   Y + + E+ +P+++H +  G+IER +  ++E    
Sbjct: 435 DNLDKAAALSTVQIDVENAERFGITYYDENGEEKYPLILHCSPSGAIERVMYAILEKQAK 494

Query: 541 ----NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                 K   PLWLSPIQ  V  ++   ++YA  +A  L+   + ++ D  +E +N KIR
Sbjct: 495 LMNEGKKPMFPLWLSPIQVRVIPVSEEYLDYALYVAGKLEGAKIRVDVDDEDERLNKKIR 554

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
               + IP I++ G +E    +I +RR       +  + + I  + +++
Sbjct: 555 RAEKEWIPYIVVVGAREKENGTITVRRREDGKQYETRIEELIKEIKEKT 603


>gi|15220911|ref|NP_173238.1| threonyl-tRNA synthetase, putative / threonine--tRNA ligase,
           putative [Arabidopsis thaliana]
 gi|85701287|sp|Q8GZ45|SYTC_ARATH RecName: Full=Probable threonyl-tRNA synthetase, cytoplasmic;
           AltName: Full=Threonine--tRNA ligase; Short=ThrRS
 gi|9665073|gb|AAF97275.1|AC034106_18 Strong similarity to threonyl-tRNA synthetase from Arabidopsis
           thaliana gb|Y14329 and is a member of the tRNA
           synthetase PF|00587 class II
 gi|332191535|gb|AEE29656.1| threonyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 458

 Score =  282 bits (722), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 117/393 (29%), Positives = 183/393 (46%), Gaps = 46/393 (11%)

Query: 254 DLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDS 313
           ++F    D     FWH                         ++  +L Q L Q+      
Sbjct: 101 EIFGFDSDQGRNTFWH-------------------------SSAHILGQALEQE------ 129

Query: 314 YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP 373
           Y   +    C  +   +   +        G     NH      +LP+R+AEFG ++RNE 
Sbjct: 130 YGCKLCIGPC--EPRDEGFYYDSLYYGELG--LNDNHFPNIEAKLPIRMAEFGVLHRNED 185

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
           SG+L G+ RVR F QDDAH+FC  +Q+  E   + + I  +Y+ FGF   +  LSTRP+ 
Sbjct: 186 SGALGGMTRVRRFVQDDAHIFCRVDQVEEEVKGVLDFIDYVYRIFGFTYELT-LSTRPKD 244

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
            +G    W  AEN ++  LD             +  G+GAFYGPK +  + DA  R +QC
Sbjct: 245 HIGDLETWAKAENDLEKALDDFGKPW------VIKEGDGAFYGPKIDITVSDARNRKFQC 298

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI 553
            TIQ+DF LP+ F   Y++  +E   PVMIH AV GSIER   I++E++KG  P WLSP 
Sbjct: 299 ATIQLDFQLPACFKLKYLSEKNEMEAPVMIHSAVLGSIERMFAILLEHYKGIWPFWLSPR 358

Query: 554 QAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
           QAIV +++     YA+++   +      ++ D  + ++  K+ +        I++ G KE
Sbjct: 359 QAIVCSLSEDCSSYAKQVQKQINEVGYYVDIDESDRSLRKKVADARDAPYNYILVVGQKE 418

Query: 614 ASERSIGIRRF----GSTTTQKVSLLDAIPILT 642
            +   + +R      G     ++S+   +    
Sbjct: 419 VATGQVTVRLREDPEGRKDLPEMSIESLLDEFK 451



 Score =  117 bits (293), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 39/130 (30%), Positives = 66/130 (50%), Gaps = 8/130 (6%)

Query: 3   SDIKLTF-PDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
             IK+T  PDG  K       +  D+A  IS+ LAK A+  ++N  + D++ P+  + S+
Sbjct: 41  DPIKITLLPDGIEKEGRRWETSPMDIAVQISKGLAKSALVSSVNHVLWDMNRPLEGDCSL 100

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP--IIEDGFYYD--FDKEQPFS 115
           EI   +  +      HS AHI+ +A++  +   ++ IGP    ++GFYYD  +  E   +
Sbjct: 101 EIFGFDSDQGRNTFWHSSAHILGQALEQEY-GCKLCIGPCEPRDEGFYYDSLYYGELGLN 159

Query: 116 SDELAQIEKK 125
            +    IE K
Sbjct: 160 DNHFPNIEAK 169


>gi|57641105|ref|YP_183583.1| threonyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
 gi|73919819|sp|Q5JGC8|SYT_PYRKO RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|57159429|dbj|BAD85359.1| Threonyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
          Length = 626

 Score =  282 bits (722), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 105/461 (22%), Positives = 190/461 (41%), Gaps = 32/461 (6%)

Query: 199 KLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL-----YFLEESEKRDHRKLAREM 253
           K  K   +YW   +    L  +    +   + L +++            +  H +L  E 
Sbjct: 156 KEEKELKSYWYILTPEGELIDVDKFDFTGHENLKKFVNYEIAKNRVADREPPHVRLMLEQ 215

Query: 254 DLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHW 311
           +L        +G + ++ KG  I   L  Y+  K+ +    E+ TP + D        + 
Sbjct: 216 ELVDYEPGSDAGNLRYYPKGRLIKSLLEQYVTEKVIEYGAMEVETPIMYDFEHPALEKYL 275

Query: 312 DSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV-YR 370
           + + A  + VK  D      + F L+   C G   +      SYR LP+R+ E     +R
Sbjct: 276 NRFPARQYVVKSGD------KKFFLRFAACFGQFLIKKDATISYRNLPLRMYELTRYSFR 329

Query: 371 NEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
            E SG L GL R+R FT  D H      +Q  +E  K + L + + K  G      +++ 
Sbjct: 330 REKSGELSGLRRLRAFTMPDMHTVARDLKQAMDEFKKQYKLSMEVLKGVGLTPEDYEVAI 389

Query: 430 RPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGR 489
           R  +       W+   + +  +   I       +   +      ++  KFE+   D + +
Sbjct: 390 RFTR-----DFWEQNRDFIVELAKIIGKP----VLIEMWDQRFFYFILKFEFNFVDNLDK 440

Query: 490 DWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE--------N 541
                T+Q+D     RF   Y +   ++  P+++H +  G+IER +  ++E         
Sbjct: 441 AAALSTVQIDVENAERFGIKYYDEEGKERTPLILHCSPSGAIERVMYAILEKQAKLQEKG 500

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            K   PLWLSPIQ  V  ++   ++YA  +A  L+   + ++ D   + +N KIR+   +
Sbjct: 501 IKPMYPLWLSPIQVRVIPVSDEVMDYALYVAGKLEGAKIRVDVDDTGDRLNKKIRKAEKE 560

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            IP II+ G  E  + ++ +RR       ++ L D I  + 
Sbjct: 561 WIPYIIVVGRNEKEQNTVTVRRRSDGRQVEMQLEDLIREIK 601


>gi|45357977|ref|NP_987534.1| threonyl-tRNA synthetase [Methanococcus maripaludis S2]
 gi|73919806|sp|Q6M057|SYT_METMP RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|44920734|emb|CAF29970.1| Threonyl-tRNA synthetase [Methanococcus maripaludis S2]
          Length = 622

 Score =  282 bits (722), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 99/436 (22%), Positives = 170/436 (38%), Gaps = 33/436 (7%)

Query: 228 QQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIF-WHRKGWKIFQTLISYMRRK 286
           + EL       E  E   H K  +E ++           F W+ KG  I   L  Y+   
Sbjct: 183 KHELEIKEEATERGEP-PHVKYIKEKEICDYEPSSDAGHFRWYPKGKLIRDLLSDYVYNL 241

Query: 287 I-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           + +     + TP + D        H D +    +            +   L+   C G  
Sbjct: 242 VVERGGMPVETPVMYDLQNNAIREHADKFGERQYRFTQG------GKDLMLRFAACFGQF 295

Query: 346 AVFNHGLKSYRELPVRLAEFGSV-YRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
            +        + LP+RL E  +  +R E  G L GL R+R FT  D H  C   +   E 
Sbjct: 296 MMKKDMYLLPKHLPLRLYELSTYSFRYEQRGELVGLKRLRAFTMPDMHTVCMDMKQAMEA 355

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            +    + +    DF       K       R   D   ++ E       +  +   +D I
Sbjct: 356 FEDQLWMGLKTGDDF-------KTPYAIIFRFTQDFFDENKEWFFAMAKEYKQKYGKDAI 408

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
              +L G   ++  K +  + D+ GR  +  T+Q+D     RF     +   +K HP+++
Sbjct: 409 -LEILSGRKHYWVGKVDMAVVDSFGRPIENPTVQIDVESAERFGIVVHDGD-KKVHPIIL 466

Query: 524 HRAVFGSIERFIGIMIENFK--------GNLPLWLSPIQAIVTTITSSAVEYAQEIANLL 575
           H +  GS+ER +  ++EN            LP WL+PIQA V  +     EYA E+ N L
Sbjct: 467 HCSPTGSVERVLCGLLENAYLNTLENKPPALPTWLTPIQARVIPVGDKHEEYALEVVNKL 526

Query: 576 KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASER--SIGIR---RFGSTTTQ 630
           +S  +  + D R E++  KIR      +  +++ GD E      ++ +R          +
Sbjct: 527 RSSGIRADFDDREESMGKKIRNAGTDWVNYVVVIGDSEMESGKLTVTVREESELKKPKKE 586

Query: 631 KVSLLDAIPILTKESL 646
            +S+ + I  ++ E++
Sbjct: 587 SLSVEELIEKISSETI 602


>gi|38569901|gb|AAR24471.1| predicted threonyl-tRNA synthetase [uncultured crenarchaeote
           DeepAnt-EC39]
          Length = 616

 Score =  280 bits (716), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 97/468 (20%), Positives = 199/468 (42%), Gaps = 32/468 (6%)

Query: 193 QVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELT-----QYLYFLEESEKRDHR 247
           +     +      +YW   +    +  I    ++  ++L      +        E   H 
Sbjct: 140 KTSTALESESKIKSYWYIMTLDGKMEEIEKFNFSNHKQLELLAKYESAKKRSVDEPPPHV 199

Query: 248 KLAREMDL-FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLW 305
            L +++ +  +     SG + ++  G  I   +  Y+  KI++    E+ TP + D H  
Sbjct: 200 NLMKKLAIADYEPASDSGNMRFYPNGRLIKSQIEQYVTDKIRNYGGIEVETPIMYDSHHP 259

Query: 306 QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEF 365
               +++ + A  +++        + +   L+   C G   + +    SY+ LP +L E 
Sbjct: 260 SMESYFNRFPARQYSI------DSEGKHLFLRFAACFGQFLMASDFQLSYKNLPYKLYEL 313

Query: 366 GSV-YRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKI 423
               +R E SG L GL R+R FT  D H FC    Q  +E  K  +L   +    G E+ 
Sbjct: 314 TRYSFRREQSGELVGLRRLRAFTMPDCHAFCKDMSQAIDEFRKRFDLSREVLSGLGIEEN 373

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
             ++  R           +D  N  K ++  + +     +   +   +  ++  K+E+  
Sbjct: 374 DYEVGIR---------FTEDFYNENKDLIKQLVSKVGKPVLIEMWKEKFFYFVLKWEFNF 424

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D +G+     T Q+D     R+   + +  +E+ HP+++H +  G++ER I  ++E   
Sbjct: 425 IDNLGKASSLSTDQIDVENGKRYGITFTDEKNEQQHPIILHNSPSGAVERVIYALLEKSA 484

Query: 544 GN--------LPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
                      PLWL+PIQ  +  +    +E+A  +A+ L   ++ ++ D RN+TI  +I
Sbjct: 485 MQIKDGKIPQFPLWLAPIQVRLIPLKDDFLEFASNLASKLTEQNIRVDIDDRNDTIGKRI 544

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           R+   + I  +++ G+KE +  S+ +R   +   +++S  D +  +  
Sbjct: 545 RDAEKEWINYVLVIGEKEMNSSSLSVRDRTTGDVRQLSTEDFVKEIQD 592


>gi|167044354|gb|ABZ09032.1| putative anticodon binding domain protein [uncultured marine
           crenarchaeote HF4000_APKG6C9]
          Length = 616

 Score =  280 bits (716), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 96/468 (20%), Positives = 201/468 (42%), Gaps = 32/468 (6%)

Query: 193 QVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF-----LEESEKRDHR 247
           +     +      +YW   ++   +  I    ++  ++L  +  +         E   H 
Sbjct: 140 KTSTALESESKTKSYWYIMTSDGNMEEIEKFNFSNHKQLEIFAKYESAKKRSVDEPPPHV 199

Query: 248 KLAREMDL-FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLW 305
            L +++ +  +     SG + ++  G  I   +  Y+  K++D    E+ TP + D H  
Sbjct: 200 NLMKKLAIADYEPASDSGNMRFYPNGRLIKSQIEQYVTDKVRDYGGIEVETPIMYDSHHP 259

Query: 306 QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEF 365
               +++ + A  +++        + R   L+   C G   + +    SY+ LP +L E 
Sbjct: 260 SMESYFNRFPARQYSI------DSEGRHLFLRFSACFGQFLMASDFQLSYKNLPYKLYEL 313

Query: 366 GSV-YRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFEKI 423
               +R E SG L GL R+R FT  D H FC       +   K  +L   +    G E+ 
Sbjct: 314 TRYSFRREQSGELVGLRRLRAFTMPDCHAFCKDMPQAIDEFGKRFDLSREVLSGLGIEEN 373

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
             +   R           +D  N  K ++  + +     +   +   +  ++  K+E+  
Sbjct: 374 DYETGIR---------FTEDFYNKNKELIKQMVSKVGKPVLVEMWKEKFFYFVLKWEFNF 424

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D +GR     T Q+D     R+   + +  +E+ +P+++H +  G++ER I  ++E F 
Sbjct: 425 VDDLGRASALSTDQIDVENAKRYGITFTDEKNEQQYPIILHNSPSGAVERVIYALLEKFA 484

Query: 544 --------GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
                      PLWL+PIQ  +  +    +E++ ++AN L   ++ ++ D RN+TI  +I
Sbjct: 485 KQIKDGKRPQFPLWLAPIQVRLIPLKDDFLEFSSDLANKLTEQNIRVDIDDRNDTIGKRI 544

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           R+   + I  +++ G++E +  S+ +R   +   +++S+ D +  +  
Sbjct: 545 RDAEKEWISYVLVIGEREVNSSSLSVRDRTTGDVRQLSIEDFVKEIKD 592


>gi|224027144|ref|ZP_03645510.1| hypothetical protein BACCOPRO_03905 [Bacteroides coprophilus DSM
           18228]
 gi|224020380|gb|EEF78378.1| hypothetical protein BACCOPRO_03905 [Bacteroides coprophilus DSM
           18228]
          Length = 326

 Score =  279 bits (714), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 125/331 (37%), Positives = 198/331 (59%), Gaps = 9/331 (2%)

Query: 39  VAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIG 97
           +A  +NG+  DL+ P+  + +  +   ED        H+ AH++AEA+Q ++P +Q  IG
Sbjct: 1   MACGVNGETIDLNRPISEDANFVLYKWEDEEGKHAFWHTSAHLLAEALQELYPGIQFGIG 60

Query: 98  PIIEDGFYYDFD-KEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEA 156
           P IE+GFYYD D  E      +L  IEKKM E+ A+    ++Q ++ + A ++F  + E 
Sbjct: 61  PAIENGFYYDVDPGEAVIKEGDLPAIEKKMAELAAKKETLVRQSIAKDDALKMFGERGET 120

Query: 157 YKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPM 216
           YK E++  +    ++T Y QG + DLCRGPH+ ST  +K   KL+ VAGAYWRG  +R  
Sbjct: 121 YKCELISEL-EDGHITTYTQGAFTDLCRGPHLMSTAPIK-AIKLLSVAGAYWRGQEDRKQ 178

Query: 217 LSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKI 275
           ++RIYG  +  ++ L +YL  LEE++KRDHRK+ +EMDLF  ++    G+  W  KG  +
Sbjct: 179 MTRIYGITFPKKKMLDEYLVMLEEAKKRDHRKIGKEMDLFMFSDTVGKGLPMWLPKGTAL 238

Query: 276 FQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
              L  ++RR + + DY+E+  P + ++ L+  SGH+  Y  + F       T ++   +
Sbjct: 239 RLRLQDFLRRIQARYDYQEVICPPIGNKLLYVTSGHYAKYGKDAFQ---PIHTPEEGEEY 295

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEF 365
            LKPMNCP H  ++ +  +SYR+LP+R+AEF
Sbjct: 296 FLKPMNCPHHCMIYKNSPRSYRDLPLRIAEF 326


>gi|213582472|ref|ZP_03364298.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
          Length = 238

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 108/241 (44%), Positives = 152/241 (63%), Gaps = 6/241 (2%)

Query: 412 ISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
             +Y  FGFEKI+VKLSTRP+KR+GSD +WD AE  +   L+      ++ I     LGE
Sbjct: 1   YDMYSTFGFEKIVVKLSTRPDKRIGSDEMWDRAEADLAVALE------ENNIPFEYQLGE 54

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
           GAFYGPK E+ L D + R WQCGT+Q+DF+LPSR +A YV   +E+  PVMIHRA+ GS+
Sbjct: 55  GAFYGPKIEFTLYDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSM 114

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           ERFIGI+ E F G  P WL+P+Q +V  IT S  EY  E+   L++  + ++ D RNE I
Sbjct: 115 ERFIGILTEEFAGFFPTWLAPVQVVVMNITDSQSEYVNELTQKLQNAGIRVKADLRNEKI 174

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
            +KIREH+++++P +++CGDKE     + +R         + + D I  L +E      Q
Sbjct: 175 GFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTRRGKDLGSLDVNDVIEKLQQEIRSRSLQ 234

Query: 652 K 652
           +
Sbjct: 235 Q 235


>gi|118575454|ref|YP_875197.1| threonyl-tRNA synthetase [Cenarchaeum symbiosum A]
 gi|166223332|sp|A0RU76|SYT_CENSY RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|118193975|gb|ABK76893.1| threonyl-tRNA synthetase [Cenarchaeum symbiosum A]
          Length = 615

 Score =  277 bits (709), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 100/472 (21%), Positives = 189/472 (40%), Gaps = 33/472 (6%)

Query: 191 TGQVKKFFKLMKVAGAYWRGDSNRPMLS----RIYGTAWNTQQELTQYLYFLEESEKRDH 246
           TG  K       +   +     +  M         G          +        E   H
Sbjct: 138 TGAPKALESESSMKSTWHVLTPDGNMTDASEFDFAGCPKLKALARYEASKKRGTDEPPPH 197

Query: 247 RKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
             L + M +  +  A D   + F+   G  I   +  Y+  ++ +    E+ TP + D +
Sbjct: 198 VALMKRMGIADYEPASDAGNMKFF-PNGRLIKSLIERYVTERVVEYGGYEVETPIMYDSN 256

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
                 +++ + A  +++        + ++  L+   C G   +      SY+ LP RL 
Sbjct: 257 HPSMVSYFNRFPARQYSI------DSEGKSLFLRFAACFGQFLMAGDYQLSYKNLPFRLY 310

Query: 364 EFGSV-YRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI-HNLIISIYKDFGFE 421
           E     +R E SG L GL R+R FT  D H FCT          +   L   +    G +
Sbjct: 311 ELTRYSFRREQSGELVGLRRLRAFTMPDCHAFCTDMAQAVREAGVRFELSRDVIGQLGLD 370

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
               +++ R         L ++      G +  +       +   +      ++  K+E+
Sbjct: 371 AADYEMAIR---------LTEEFYAENGGAVREMVRRHGRPVLVEMWKERFFYFVLKWEF 421

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE- 540
              D  G+     T Q+D     R+   +V+ ++ + HPV++H +  G+IER I  ++E 
Sbjct: 422 NYIDGAGKASALSTDQIDVENGKRYGIEFVDENNGRQHPVILHNSPSGAIERVIYTLLEK 481

Query: 541 -------NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
                    K  LPLWLSP+QA +  +    V  A E+A  +  H +  + D RNE++  
Sbjct: 482 AAADSARGTKPELPLWLSPVQARIIPVGEELVRNATELAKEMAGHGIRADVDDRNESMGK 541

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           +IRE   + +  I++ G+KEA+   + +R   +  + ++ L D +  + +++
Sbjct: 542 RIREAEKEWVRYILVVGEKEAASGRLSVRDRRTGKSTEMGLDDLVEAVREQT 593


>gi|315230254|ref|YP_004070690.1| threonyl-tRNA synthetase [Thermococcus barophilus MP]
 gi|315183282|gb|ADT83467.1| threonyl-tRNA synthetase [Thermococcus barophilus MP]
          Length = 625

 Score =  277 bits (709), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 101/457 (22%), Positives = 191/457 (41%), Gaps = 32/457 (7%)

Query: 206 AYWRGDSNRPMLSRIYGTAWNTQQELTQY-----LYFLEESEKRDHRKLAREMDLFHI-A 259
           +YW   +    L  +    +   + L ++            ++  H K+  E +L     
Sbjct: 162 SYWYILTPEGELVEVDKFDFTGHENLRKFANYEISKSRIAEKEPPHVKIMLEQELVDYEP 221

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANM 318
               G + ++ KG  I   L  Y+  K+ +    E+ TP + D        + + + A  
Sbjct: 222 GSDPGNLRYYPKGRLIKSLLEQYVTEKVIEYGAMEVETPIMYDFEHPALEKYLNRFPARQ 281

Query: 319 FAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV-YRNEPSGSL 377
           + VK  D      + + L+   C G   +      SY+ LP+R+ E     +R E  G L
Sbjct: 282 YIVKSGD------KKYFLRFAACFGQFLIKKDATISYKHLPLRMYELTRYSFRREKRGEL 335

Query: 378 HGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
            GL R+R FT  D H      +Q   E  K + L + + K  G      +++ R      
Sbjct: 336 SGLRRLRAFTMPDMHTVAKDLKQAMEEFKKQYKLSMEVLKGVGLTPDDYEVAIRF----- 390

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
           ++  W++ ++ +  ++  I       +   +      ++  KFE+   D + +     T+
Sbjct: 391 TEDFWNENKDFVVELVKIIGKP----VLIEMWKQRFFYFILKFEFNFVDNLDKAAALSTV 446

Query: 497 QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE--------NFKGNLPL 548
           Q+D     RF   Y +   ++ HP+++H +  G+IER +  ++E          K   PL
Sbjct: 447 QIDVENAERFGITYYDEDGKEKHPLILHCSPSGAIERVMYAILEKQAKLRNQGKKPMYPL 506

Query: 549 WLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIII 608
           WLSPIQ  V  +    ++YA  IA  L+   + ++ D  ++ +  KIR+   + IP II+
Sbjct: 507 WLSPIQVRVIPVNEDYLDYALYIAGKLEGARIRVDVDDTSDRLTKKIRKAEKEWIPYIIV 566

Query: 609 CGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
            G+ E  +  I +R+       ++ L D I  + + +
Sbjct: 567 VGENEKRQGIITVRKREDGKQYEMQLEDLIKEIKQRT 603


>gi|309808028|ref|ZP_07701947.1| anticodon binding domain protein [Lactobacillus iners LactinV
           01V1-a]
 gi|308168711|gb|EFO70810.1| anticodon binding domain protein [Lactobacillus iners LactinV
           01V1-a]
          Length = 275

 Score =  277 bits (709), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 97/273 (35%), Positives = 148/273 (54%), Gaps = 11/273 (4%)

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK--- 433
           + GL RVR  T +D H F   +Q+ +E  KI  LI+ +Y+DF       +LS R  K   
Sbjct: 1   MSGLQRVREMTLNDGHTFVELDQVQSEFAKILKLIMEVYRDFDITDYYFRLSYRDPKNTD 60

Query: 434 -RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
               +D +W+ ++ ++KG +D +       +      GE AFYGPK +   K A+G D  
Sbjct: 61  KYFANDEMWERSQKMLKGAMDDLG------LEYVEAEGEAAFYGPKLDIQTKTALGNDET 114

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
             TIQ+DF LP RFN  YV    E+  PVM+HR + G++ERFI  + E +KG  P WL+P
Sbjct: 115 MSTIQLDFMLPERFNLSYVGKDGEEHRPVMVHRGIVGTMERFIAYLTEIYKGAFPTWLAP 174

Query: 553 IQAIVTTI-TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
           +Q  +  +   +  EYAQ + + L       E DFRNE + YKIRE   +K+P  ++ GD
Sbjct: 175 LQVKIIPVNNDAHGEYAQNVKDQLMKLGFRAEVDFRNEKLGYKIREAQTQKVPYTLVLGD 234

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            E    S+ +R++GS   +  +L + +  L+ +
Sbjct: 235 DELQHNSVNVRKYGSEDQESKALSEFVSELSAD 267


>gi|332158991|ref|YP_004424270.1| threonyl-tRNA synthetase [Pyrococcus sp. NA2]
 gi|331034454|gb|AEC52266.1| threonyl-tRNA synthetase [Pyrococcus sp. NA2]
          Length = 625

 Score =  277 bits (709), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 103/469 (21%), Positives = 195/469 (41%), Gaps = 32/469 (6%)

Query: 194 VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY-----LYFLEESEKRDHRK 248
            +   K  K   +YW   +    L  +    +   + L ++            ++  H K
Sbjct: 150 PEALKKEEKELVSYWYILTPEGELIEVDKFDFTGYENLRKFANYEISKSRIAEKEPPHVK 209

Query: 249 LAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ 306
           L  E +L         G + ++ KG  I   L  Y+  K+ +    E+ TP + D     
Sbjct: 210 LMLEHELVDYEPGSDPGNLRYYPKGRLIKSLLEQYVTEKVIEYGAMEVETPVMYDFEHPA 269

Query: 307 QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFG 366
              + + + A  + V   D      + + L+   C G   +    + SY+ LP+R+ E  
Sbjct: 270 LEKYLNRFPARQYIVLSGD------KRYFLRFAACFGQFLISKDAVISYKHLPLRMYELT 323

Query: 367 SV-YRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIM 424
              +R E  G L GL R+R FT  D H      EQ   E  K   L + + +  G     
Sbjct: 324 RYSFRREKRGELSGLRRLRAFTMPDMHTLAKDLEQAKEEFKKQFKLSMEVLEGVGLTPDD 383

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
            +++ R      ++  W +  + +  ++  I       +   +      ++  KFE+   
Sbjct: 384 YEVAIRF-----TEDFWKENRDFIIELVKLIGKP----VLIEMWKQRFFYFILKFEFNFV 434

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE---- 540
           D + +     T+Q+D     RF   Y + + E+ +P+++H +  G+IER +  ++E    
Sbjct: 435 DNLDKAAALSTVQIDVENAERFGIKYYDENGEERYPLILHCSPSGAIERVMYAILEKQAK 494

Query: 541 ----NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                 K  LP+WLSPIQ  V  +++  ++YA  +A  L+   + ++ D  +E +N KIR
Sbjct: 495 LMQQGKKPMLPVWLSPIQVRVIPVSNDFLDYALYVAGKLEGAKIRVDVDDEDERLNKKIR 554

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
               + IP I++ G KE    +I +RR       +  + + I  + +++
Sbjct: 555 RAEKEWIPYIVVVGAKEKETGTIMVRRREDGKQYETRIEELIREIKEKT 603


>gi|330888316|gb|EGH20977.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. mori str.
           301020]
          Length = 250

 Score =  277 bits (709), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 104/245 (42%), Positives = 151/245 (61%), Gaps = 6/245 (2%)

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNS 458
           +M  E      L + +Y DFGF+ I +KLSTRPEKRVGSD LWD AE  +   LD+    
Sbjct: 1   KMKAESAAFIKLTLDVYADFGFKDIELKLSTRPEKRVGSDELWDRAETALASALDSAG-- 58

Query: 459 SQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC 518
               +   +  GEGAFYGPK E+ LKD +GR WQCGT+Q+DFNLP R +A YV+  + + 
Sbjct: 59  ----LPYDLQPGEGAFYGPKIEFSLKDCLGRVWQCGTLQLDFNLPIRLSAEYVSEDNSRK 114

Query: 519 HPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSH 578
           +PVM+HRA+ GS ERFIGI+IE+++G  P WL+P QA++  IT    ++A E+   L   
Sbjct: 115 NPVMLHRAILGSFERFIGILIEHYEGAFPAWLAPTQAVIMNITDKQADFALEVEKTLAES 174

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
               ++D RNE I +KIREH++ K+P +++ GD+E   +++ +R         + +    
Sbjct: 175 GFRAKSDLRNEKIGFKIREHTLLKVPYLLVIGDREVEMQTVAVRTREGADLGSMPVAQFA 234

Query: 639 PILTK 643
             L +
Sbjct: 235 EFLAQ 239


>gi|18977723|ref|NP_579080.1| threonyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
 gi|22654114|sp|Q8U176|SYT_PYRFU RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|18893458|gb|AAL81475.1| threonyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
          Length = 625

 Score =  277 bits (708), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 100/469 (21%), Positives = 194/469 (41%), Gaps = 32/469 (6%)

Query: 194 VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL-----YFLEESEKRDHRK 248
            +   K      +YW   +    L  +    +   + L ++            ++  H +
Sbjct: 150 PEALKKEETELVSYWYILTPEGELVEVDKFDFTGHENLRKFANYEIAKSRIADKEPPHVR 209

Query: 249 LAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ 306
           L  E +L         G + ++ KG  I   L  Y+  K+ +    E+ TP + D     
Sbjct: 210 LMLEHELVDYEPGSDPGNLRYYPKGRLIKSLLEQYVSEKVIEYGAMEVETPIMYDFEHPA 269

Query: 307 QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFG 366
              + + + A  + V   D      + + L+   C G   +      SYR LP+R+ E  
Sbjct: 270 LEKYLNRFPARQYIVLSGD------KRYFLRFAACFGQFMISKDATISYRNLPLRMYELT 323

Query: 367 SV-YRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIM 424
              +R E  G L GL R+R FT  D H      EQ  +E  K   L + +    G     
Sbjct: 324 RYSFRREKRGELSGLRRLRAFTMPDMHTLAKDIEQAKDEFKKQFKLSMEVLGGVGLTPDD 383

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
            +++ R      ++  W++ ++ +  ++  I       +   +      ++  KFE+   
Sbjct: 384 YEVAIRF-----TEDFWNEHKDFIIELVKLIGKP----VLIEMWKQRFFYFILKFEFNFV 434

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE---- 540
           D + +     T+Q+D     RF   Y + + E+ +P+++H +  G+IER +  ++E    
Sbjct: 435 DNLDKAAALSTVQIDVENAERFGITYYDENGEEKYPLILHCSPSGAIERVMYAILEKQAK 494

Query: 541 ----NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                 K   PLWLSPIQ  V  ++   ++YA  +A  ++   + ++ D  +E ++ KIR
Sbjct: 495 LMQEGKKPMFPLWLSPIQVRVIPVSKEYLDYALYVAGKIEGARIRVDVDDEDERLSKKIR 554

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
               + IP I++ G+KE    +I +RR       +  + + I  + +++
Sbjct: 555 RAEKEWIPYIVVVGEKEKETGTITVRRREDGKQYETRIEELIKEIKQKT 603


>gi|294496278|ref|YP_003542771.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase
           [Methanohalophilus mahii DSM 5219]
 gi|292667277|gb|ADE37126.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase
           [Methanohalophilus mahii DSM 5219]
          Length = 631

 Score =  277 bits (708), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 112/544 (20%), Positives = 217/544 (39%), Gaps = 53/544 (9%)

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K +++ +       +      KA ++        K   L  +    N      GE  D  
Sbjct: 98  KDIEKSLIDSFNVKRAPFGWYKAFKIS------CKGHPLSELSRTINPETESCGEGVDT- 150

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQEL-----TQYLYFL 238
                     V +  K    A +YW+  +   +L  + G  +N    L      +     
Sbjct: 151 ------EEEVVSEALKAESTARSYWKVLTPDGVLHDVDGFNFNDHANLGTFVDHEISKSR 204

Query: 239 EESEKRDHRKLAREMDL-FHIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINT 296
              +   H +L R +++  +     SG + ++ KG  I   L  Y+     ++   E+ T
Sbjct: 205 AVEKVPPHVELMRRLEIADYEPGSDSGNMRYYPKGRLIKSLLERYVLDSSSREGAMEVET 264

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P + D +      + D + A  ++++       D R   L+   C G   + +    S+ 
Sbjct: 265 PLMYDMNHPTLKKYLDRFPARQYSIE------SDKRHMFLRFAACFGQFLMSHDMTISHH 318

Query: 357 ELPVRLAEFGSV-YRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISI 414
            LP+++ E     +R E  G L GL R+R FT  D H  C   +Q   +  + + + I +
Sbjct: 319 NLPMKMVELTRYSFRKEQRGELVGLRRLRAFTMPDMHTMCGDMDQAVEQFGRQYQMSIDV 378

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            KD G +    +++ R  +    +          K  +  +       +   +      +
Sbjct: 379 LKDVGIDVSDYEVAIRLTRDFYEE---------NKDFITALAKKVNKPVLVEMWEKRFFY 429

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           +  KFE+   DA+ +     T+Q+D     R++  Y++   E   PV++H +  G+IER 
Sbjct: 430 FVLKFEFNFVDALKKASALSTVQIDVENAERYDIKYIDQAGEAKRPVVLHCSPSGAIERC 489

Query: 535 IGIMIENFKGN--------LPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF 586
           I  ++E             LP+WLSP Q  V  I    +E+A+E+A+ ++     ++ D 
Sbjct: 490 IYSLLEKASMKAEGGEVPMLPVWLSPTQVRVIPIAERHMEFAEEVASRIQ---CRVDIDD 546

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK-----VSLLDAIPIL 641
           R ET+  KIR    + +P +++ GD+EA    + +     +  +K     +S+ +    +
Sbjct: 547 REETVGKKIRNAGQEWVPYVVVVGDREAESGKVNVTVREESKPKKPSKVEMSVDELNSRI 606

Query: 642 TKES 645
            KE+
Sbjct: 607 LKET 610


>gi|284161285|ref|YP_003399908.1| threonyl-tRNA synthetase [Archaeoglobus profundus DSM 5631]
 gi|284011282|gb|ADB57235.1| threonyl-tRNA synthetase [Archaeoglobus profundus DSM 5631]
          Length = 618

 Score =  277 bits (708), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 104/480 (21%), Positives = 203/480 (42%), Gaps = 37/480 (7%)

Query: 188 VRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWN-----TQQELTQYLYFLEESE 242
           V    +V +  K  +   +YW   +    L  +    +       +    +        +
Sbjct: 133 VEEEKEVTQALKAEEKVKSYWFILTPDKELVEVEKFDFTGYENLRKFARYEMEKRRAVDK 192

Query: 243 KRDHRKLAREMDL-FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
              H +L + +++  +     SG + ++ KG  I   L  ++  K  +    E+ TP + 
Sbjct: 193 IPPHVELMKRLEIADYEPASDSGHLRYYPKGRLIKSLLEEFVTLKCIEYGAMEVETPIMY 252

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D+       + + + A  + +K       D R F L+   C G   + +  + +Y+ LP+
Sbjct: 253 DRSHPTLRRYLERFPARQYIIK------GDKREFFLRFAACFGQFLIAHDSVITYKNLPM 306

Query: 361 RLAEFGSV-YRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDF 418
           +L E     +R E  G L GL R+R FT  D H F    EQ   E    + L + + K  
Sbjct: 307 KLYELTRYSFRKEQRGELVGLRRLRAFTMPDMHTFVRDMEQAKQEFFNQYKLSVEVLKGI 366

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           G +    +++ R      +   ++  +  +  ++D ++      I   +      ++  K
Sbjct: 367 GIDPEDYEVAVRV-----TKDFYEQNKEFIHSLVDILRKP----ILVEMWDQRFFYFVLK 417

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           FE+   DA+ +     T+Q+D     R++  YV+ + EK  P+++H ++ G+IER +  +
Sbjct: 418 FEFNFVDALEKASALSTVQIDVENAERYDISYVDENGEKKRPLILHCSLSGAIERCMYAL 477

Query: 539 IENFKGNL--------PLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
           +E    N+        P+WLSP Q  V  ++   ++ A E+AN L    +  + D R+ET
Sbjct: 478 LEKAHMNMERGKLPMLPVWLSPTQVRVIPVSERYLDRAIEVANELSRRGIRADVDDRDET 537

Query: 591 INYKIREHSIKKIPIIIICGDKEASER--SIGIR---RFGSTTTQKVSLLDAIPILTKES 645
           +  KIR+   + IP + + G+ E      ++ IR           K+S+ +    + KE 
Sbjct: 538 LGKKIRDAGREWIPYVAVIGEDEVKGGFLTVTIRAESTLKEQKRVKMSIDELAERVKKEC 597


>gi|303243566|ref|ZP_07329908.1| threonyl-tRNA synthetase [Methanothermococcus okinawensis IH1]
 gi|302486127|gb|EFL49049.1| threonyl-tRNA synthetase [Methanothermococcus okinawensis IH1]
          Length = 631

 Score =  277 bits (707), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 104/466 (22%), Positives = 185/466 (39%), Gaps = 33/466 (7%)

Query: 197 FFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLF 256
           F+ L          +          G       E+        E+E   H K  RE ++ 
Sbjct: 161 FYLLNGETKELIELNEKNVKKLDDEGLKAIAMHEMGIKHEKKGETEP-PHVKYIREKEIC 219

Query: 257 HIAEDGSGVIF-WHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQHLWQQSGHWDSY 314
                     F W+ KG  I   L  Y+   + ++    + TP + D        H D +
Sbjct: 220 DYEPSSDAGHFRWYPKGKLIRDLLEDYVYNMVVENNGMPVETPVMYDLGNKAIREHADKF 279

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV-YRNEP 373
               +  K  +      +   L+   C G   +        + LP++L E  +  +R E 
Sbjct: 280 GERQYRFKQGN------KELMLRFAACFGQFMMKKDMYILPKHLPLKLYELSTYSFRYEQ 333

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
            G L GL R+R FT  D H  C   +Q   E      + +    D      ++       
Sbjct: 334 RGELVGLKRLRAFTMPDMHTVCYDIKQAMEEFENQFWMCLKTGDDLNTPYSIIF------ 387

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
            R   D   ++ E   K   +  +   +D I   +L     ++  K +  + D+ GR  +
Sbjct: 388 -RYTKDFFDENKEWFFKIAKEYKEKYGKDVI-LELLPKRKHYWVGKVDMAVIDSFGRPIE 445

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE--------NFKG 544
             T+Q+D     RFN   V+  +EK +P+++H +  GS+ER +  ++E            
Sbjct: 446 NPTVQIDVESAKRFNIV-VHDGNEKIYPIILHCSPTGSVERVLCGLLEKASMDAEAGAPP 504

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
            LP+WLSPIQ  V  ++ +  +YA  IA  L+ +++ ++ D R E++  KIR      IP
Sbjct: 505 MLPVWLSPIQVRVIPVSDAHNDYALNIAKKLRENNIRVDYDDREESVGKKIRNAGKDWIP 564

Query: 605 IIIICGDKEASER--SIGIRR---FGSTTTQKVSLLDAIPILTKES 645
            +++ GD+E      +I +R          +K+++ + I  + +ES
Sbjct: 565 YVVVIGDEEVKNNILTITVREKSALKKPVKEKMTVDELIERIKEES 610


>gi|242398481|ref|YP_002993905.1| Threonyl-tRNA synthetase [Thermococcus sibiricus MM 739]
 gi|259516775|sp|C6A1R1|SYT_THESM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|242264874|gb|ACS89556.1| Threonyl-tRNA synthetase [Thermococcus sibiricus MM 739]
          Length = 625

 Score =  276 bits (706), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 109/469 (23%), Positives = 197/469 (42%), Gaps = 32/469 (6%)

Query: 194 VKKFFKLMKVAGAYWRGDSNRPMLSRIY-----GTAWNTQQELTQYLYFLEESEKRDHRK 248
           V +  K  +   +YW   +    L  +      G     +    +       +E+  H K
Sbjct: 150 VPEALKKEEELVSYWYILTPEGELVEVDKFDFSGYENLKKFANYEINKSRLVTEEPPHVK 209

Query: 249 LAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ 306
           +  E +L    E    G + ++ KG  I   L +Y+  K+ +    E+ TP + D     
Sbjct: 210 IMLEQELVDYEEGSDPGNLRYYPKGRLIKSLLENYVTDKVIEYGAMEVETPIMYDFEHPA 269

Query: 307 QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFG 366
              + + + A  + VK  D      + F L+   C G   +      SYR LP+R+ E  
Sbjct: 270 LEKYLNRFPARQYVVKSGD------KRFFLRFAACFGQFLIKKDATISYRHLPLRMYELT 323

Query: 367 SV-YRNEPSGSLHGLMRVRGFTQDDAHVFCT-KEQMFNECLKIHNLIISIYKDFGFEKIM 424
              +R E  G L GL R+R FT  D H      +Q   E  K + L + + K  G     
Sbjct: 324 RYSFRREKRGELSGLRRLRAFTMPDMHTVAKNLQQAMEEFKKQYKLSMEVLKGVGLTPED 383

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
            +++ R      ++  W++ ++ +  +   I       +   +      ++  KFE+   
Sbjct: 384 YEVAIRF-----TEDFWNENKDFIVDLAGIIGKP----VLIEMWKQRFFYFILKFEFNFV 434

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE---- 540
           D + +     T+Q+D     RF   Y +   ++ +P+++H +  G+IER +  ++E    
Sbjct: 435 DNLDKAAALSTVQIDVENSQRFGITYYDEEGQEKYPLLLHCSPSGAIERVMYAILEKQAK 494

Query: 541 ----NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                 K   PLWLSPIQ  +  ++   ++YA  IA  L+   +  + D RNE +N KIR
Sbjct: 495 IMKKGKKPMYPLWLSPIQVRIIPVSEKYLDYALYIAGKLEGAKIRADVDDRNERLNKKIR 554

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           E   + IP II+ G+ E     I +R+       ++ + D I  + +++
Sbjct: 555 EAEKEWIPYIIVVGENEKRMGVITVRKREDNKQYEIQVEDLIKEIRQKT 603


>gi|188590702|ref|YP_001920953.1| threonyl-tRNA synthetase 1 [Clostridium botulinum E3 str. Alaska
           E43]
 gi|188500983|gb|ACD54119.1| threonyl-tRNA synthetase 1 [Clostridium botulinum E3 str. Alaska
           E43]
          Length = 344

 Score =  276 bits (706), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 107/342 (31%), Positives = 192/342 (56%), Gaps = 16/342 (4%)

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           +++ +GH++ Y  +M+    A D       + ++ + CP H A+F    +SY+ELP+R+ 
Sbjct: 1   MYETTGHYNKYSKDMYPSFYAYD-----EDYVMRSVTCPNHYAIFLQQERSYKELPLRIT 55

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           E  ++ R + S  L GL R   FT +DAH+FC+++ +  E LKI + I  +   FG    
Sbjct: 56  EMSTLIRKDRSSELSGLYRTNTFTLNDAHIFCSQDNIELEFLKIIDFIKCVNDKFGISSH 115

Query: 424 MVKL----STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           +           +K + +++LW  +ENI++ +L+      +  ++  +   +  FYGPK 
Sbjct: 116 VRYRLSFSDFSNDKYIKNESLWKKSENILESILN------KSDLDFFISKDKACFYGPKL 169

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           + ++++  G+++   T+Q+DF LP +FN +++N++ EK  PV+IHRA+  SIER I  + 
Sbjct: 170 DVLIENYNGKEYILTTVQLDFILPGKFNVYFINNNFEKEQPVVIHRALPFSIERTIAFLT 229

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E ++G  P WL+P Q ++   T   ++Y+Q+I   LK   + IE D R+   N KI++ +
Sbjct: 230 EYYQGIFPFWLAPEQVVIIPTTLDNIKYSQQIEYHLKEIDIRIECDLRDTRFNKKIKQAT 289

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           + + P I+I GDKE+    + IR   +   Q ++L D I  L
Sbjct: 290 LNRTPYIVIVGDKESKNNMVTIRNR-NNEQQFLTLEDFIQKL 330


>gi|327401820|ref|YP_004342659.1| threonyl-tRNA synthetase [Archaeoglobus veneficus SNP6]
 gi|327317328|gb|AEA47944.1| threonyl-tRNA synthetase [Archaeoglobus veneficus SNP6]
          Length = 615

 Score =  276 bits (705), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 109/472 (23%), Positives = 203/472 (43%), Gaps = 39/472 (8%)

Query: 196 KFFKLMKVAGAYWRGDSNRPMLSRIY-----GTAWNTQQELTQYLYFLEESEKRDHRKLA 250
           +  K  +   +YW   +    L  I      G     +    +            H +  
Sbjct: 140 QALKAEEKVKSYWYILTPDKKLVEIDKFDFTGYDNLKKFANYEIAKRRAVDAIPPHVEYM 199

Query: 251 REMDL-FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQS 308
           +++ L  +     SG + ++ KG  I   L +++ +K  +    E+ TP +  +      
Sbjct: 200 KKLQLADYEEASDSGHMRYYPKGRLIKSLLETFVTQKCIEYGAMEVETPIMYSREHPTLR 259

Query: 309 GHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV 368
            + + + A  + +K       D R F L+   C G   + +    +Y+ LP+R+ E    
Sbjct: 260 RYLERFPARQYIIK------GDKREFFLRFAACFGQFLMCSDATITYKNLPLRMYELTRY 313

Query: 369 -YRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVK 426
            +R E  G L GL R+R FT  D H      EQ   E    + L +   K+ G E    +
Sbjct: 314 SFRKEQRGELVGLRRLRAFTMPDMHTLTKDMEQAKQEFFNQYKLSVETLKEIGLEPEDYE 373

Query: 427 LSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDA 486
           ++ R      +   +++ +  +  ++D +K      I   +      ++  KFE+   DA
Sbjct: 374 VAIRV-----TKDFYNENKEFVHSLVDVLKKP----ILVEMWDQRFFYFVLKFEFNFVDA 424

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE------ 540
           + +     T+Q+D     R++  YVN   EK HP ++H +  G+IER I  ++E      
Sbjct: 425 LEKASALSTVQIDVENAERYDITYVNEKGEKEHPFILHCSASGAIERCIYALLEKAYMEK 484

Query: 541 --NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
                  LP+WLSP Q  +  ++   V+YA E+A  +  + + ++ D R+ET+  KIR+ 
Sbjct: 485 EKGKLPMLPVWLSPTQVRIIPVSEKYVDYAIEVAKKM--NGVRVDVDDRDETLGKKIRDA 542

Query: 599 SIKKIPIIIICGDKEASER--SIGIRRFGSTTTQ---KVSLLDAIPILTKES 645
           S++ IP I + G+ E +E   ++ IR   +   Q   K+S+ + +  +  E 
Sbjct: 543 SMEWIPYIAVVGENEVNEGYLTVTIRSESTQKEQKRVKMSVEELVERIRMEC 594


>gi|311273541|ref|XP_003133917.1| PREDICTED: threonyl-tRNA synthetase, cytoplasmic-like [Sus scrofa]
          Length = 384

 Score =  275 bits (704), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 114/316 (36%), Positives = 173/316 (54%), Gaps = 13/316 (4%)

Query: 32  RSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWP 90
           + LA   V   +N  V DL  P+  + ++E++  ED  + AV  HS AHIM EA++ ++ 
Sbjct: 70  QGLADNTVVAKVNKVVWDLDRPLEEDCTLELLKFEDEEAQAVYWHSSAHIMGEAMERVYG 129

Query: 91  EVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKAREL 149
              +  GP IE+GFYYD   E+   SS++ + +E   ++II     F +  +  E   E+
Sbjct: 130 GC-LCYGPPIENGFYYDMYLEEGGVSSNDFSSLEALCKKIIKEKQAFERLEIKKETLLEM 188

Query: 150 FESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWR 209
           F+     +K  IL         T+YR G   DLCRGPHVR TG++K   K+ K +  YW 
Sbjct: 189 FKY--NKFKCRILNEKVNTPTTTVYRCGPLIDLCRGPHVRHTGKIKTL-KIHKNSSTYWE 245

Query: 210 GDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWH 269
           G ++   L RIYG ++   + L ++  F EE++ RDHRK+ R+ +L+   E   G  F+ 
Sbjct: 246 GKADMETLQRIYGISFPDPKMLKEWEKFQEEAKNRDHRKIGRDQELYFFHELSPGSCFFL 305

Query: 270 RKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTI 328
            KG  I+ TLI ++R + +   ++E+ TP + +  LW  SGHW  Y  NMF+ +      
Sbjct: 306 PKGAYIYNTLIDFIRSEYRKRGFQEVVTPNIYNSRLWVTSGHWQHYSDNMFSFEV----- 360

Query: 329 KDLRTFALKPMNCPGH 344
            +   FALKPMNCPGH
Sbjct: 361 -EKELFALKPMNCPGH 375


>gi|261403652|ref|YP_003247876.1| threonyl-tRNA synthetase [Methanocaldococcus vulcanius M7]
 gi|261370645|gb|ACX73394.1| threonyl-tRNA synthetase [Methanocaldococcus vulcanius M7]
          Length = 620

 Score =  275 bits (704), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 107/494 (21%), Positives = 190/494 (38%), Gaps = 43/494 (8%)

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL--- 235
           +   C+G  +    +     + MK  G   +     P    I          +       
Sbjct: 120 FKISCKGHPLSELSRKIIAKEEMKEKGEESKFYLLNPETEEIVELNEENIDIIKDEELLA 179

Query: 236 --------YFLEESEKRDHRKLAREMDLFHIAEDGSGVIF-WHRKGWKIFQTLISYMRRK 286
                      +E ++  H K  +E D+    E      F W+ KG  I   L  Y+   
Sbjct: 180 LAKHELGIKEHKEHDEPPHVKFIKEKDICSYEEASDPGHFRWYPKGKLIRDLLADYVYNL 239

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           + D     + TP + D        H D +    +  +  +      +   L+   C G  
Sbjct: 240 VVDMGAMPVETPIMYDLGNPAIREHADKFGERQYRFRQGN------KELMLRFAACFGQF 293

Query: 346 AVFNHGLKSYRELPVRLAEFGSV-YRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
            +        R LP++L E  +  +R E  G L GL R+R FT  D H  C   +Q   E
Sbjct: 294 MMKKDMYLLPRYLPLKLYELSTYSFRYEQRGELVGLKRLRCFTMPDMHTVCLDLKQAMEE 353

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             K     +    D      ++   T+          +D+  +    +    K+ +   I
Sbjct: 354 FEKQFWECLRTGDDLNLSYSVIFRFTK--------DFFDEHRDWFFKIAKEYKSKTGKDI 405

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
              +L     ++  K +  + D++GR  +  T+Q+D     RFN     +  E  +P+++
Sbjct: 406 ILEILPKRKHYWVGKVDIAVIDSLGRPIENPTVQIDVESAKRFNIKVHTNEGE-IYPIIL 464

Query: 524 HRAVFGSIERFIGIMIE--------NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLL 575
           H +  GSIER +  ++E             LP+WLSPIQ  V  I     +YA ++A  L
Sbjct: 465 HCSPTGSIERVLCGLLEKAAIEAERGNAPMLPVWLSPIQVRVIPIAERHYDYALKVAEKL 524

Query: 576 KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASER--SIGIR---RFGSTTTQ 630
           K + + ++ D R ++++ KIR      IP +++ GD+E      ++ +R          +
Sbjct: 525 KDNKIRVDVDDREDSVSKKIRNAGRDWIPYVVVIGDEEMESDKLTVTVRKKSTLKKPHKE 584

Query: 631 KVSLLDAIPILTKE 644
           K+SL + I ++ KE
Sbjct: 585 KMSLEELIELIQKE 598


>gi|207724051|ref|YP_002254449.1| threonyl-trna synthetase protein [Ralstonia solanacearum MolK2]
 gi|206589260|emb|CAQ36222.1| threonyl-trna synthetase protein [Ralstonia solanacearum MolK2]
          Length = 243

 Score =  275 bits (704), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 106/244 (43%), Positives = 147/244 (60%), Gaps = 6/244 (2%)

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQ 460
             E    ++L  S+Y+DFGFE + VKL+ RP+KR G+D +WD AE  ++  L        
Sbjct: 1   MAEAKDFNDLAFSVYEDFGFENVAVKLALRPDKRAGTDEIWDHAEEGLRTALRACG---- 56

Query: 461 DRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHP 520
             +    L GEGAFYGPK EY +KDAIGR WQCGT+Q+D  LP R  A YV   + +  P
Sbjct: 57  --VEWEELPGEGAFYGPKVEYHIKDAIGRSWQCGTLQLDLVLPERLGAEYVAEDNSRKRP 114

Query: 521 VMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHL 580
           VM+HRA+ GS ERF+GI++EN  G LPLWL+P Q +V +I  +  EYAQ +A  L+    
Sbjct: 115 VMLHRAILGSFERFLGILLENHAGALPLWLAPEQVVVMSIADAHAEYAQTVAQSLQKQGF 174

Query: 581 SIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
               D RNE I YKIREHS++K+P +++ GDKE     + +R  G+     + +   +  
Sbjct: 175 RASADLRNEKITYKIREHSLQKVPYLVVVGDKERDGNQVAVRARGNVDLGSMPISAFVER 234

Query: 641 LTKE 644
           L  +
Sbjct: 235 LQND 238


>gi|289192307|ref|YP_003458248.1| threonyl-tRNA synthetase [Methanocaldococcus sp. FS406-22]
 gi|288938757|gb|ADC69512.1| threonyl-tRNA synthetase [Methanocaldococcus sp. FS406-22]
          Length = 620

 Score =  275 bits (704), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 104/495 (21%), Positives = 189/495 (38%), Gaps = 43/495 (8%)

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL--- 235
           +   C+G  +    +     +  K  G   +     P    I   + N    +       
Sbjct: 120 FKISCKGHPLSELSRKIVAKEEKKEKGEESKFYLLNPETEEIVELSENNINIIKDDELLA 179

Query: 236 --------YFLEESEKRDHRKLAREMDLFHIAEDGSGVIF-WHRKGWKIFQTLISYMRRK 286
                      +E ++  H K  +E D+    E      F W+ KG  I   L  Y+   
Sbjct: 180 LAKHELGIREHKEHDEPPHVKFIKEKDICSYEEASDPGHFRWYPKGKLIRDLLADYVYNL 239

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +       + TP + D        H D +    +  +  +      R   L+   C G  
Sbjct: 240 VVSMGAMPVETPIMYDLGNKAIREHADKFGERQYRFRQGN------RELMLRFAACFGQF 293

Query: 346 AVFNHGLKSYRELPVRLAEFGSV-YRNEPSGSLHGLMRVRGFTQDDAHVFCT-KEQMFNE 403
            +        R LP++L E  +  +R E  G L GL R+R FT  D H  C   EQ   E
Sbjct: 294 MMKKDMYLLPRYLPLKLYELSTYSFRYEQRGELVGLKRLRCFTMPDMHTVCLNLEQAMEE 353

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             K     +    D      ++   T+          +D+  +    +    K+     +
Sbjct: 354 FEKQFWECLKTGDDLNLSYSVIFRFTK--------DFFDEHRDWFFKIAKEYKSKYGKDV 405

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
              +L     ++  K +  + D++GR  +  T+Q+D     RF+     +  E  +P+++
Sbjct: 406 ILEILPKRKHYWVGKVDIAVIDSLGRPIENPTVQIDVESAKRFDIKVHTNEGE-VYPIIL 464

Query: 524 HRAVFGSIERFIGIMIE--------NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLL 575
           H +  GSIER +  ++E             LP+WLSPIQ  V  +     +YA ++A  L
Sbjct: 465 HCSPTGSIERVLCGLLEKAAIEAKEGNAPMLPVWLSPIQVRVIPVAERHYDYALKVAEKL 524

Query: 576 KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASER--SIGIR---RFGSTTTQ 630
           +  ++  + D R E+++ KIR    + IP +++ GD+E      ++ IR          +
Sbjct: 525 RESNIRADFDDREESVSKKIRNAGKEWIPYVVVVGDEEMESGKLTVTIREKSTLKKPYKE 584

Query: 631 KVSLLDAIPILTKES 645
           K+++ + I  + KE+
Sbjct: 585 KMTVDELIERVKKET 599


>gi|288932143|ref|YP_003436203.1| threonyl-tRNA synthetase [Ferroglobus placidus DSM 10642]
 gi|288894391|gb|ADC65928.1| threonyl-tRNA synthetase [Ferroglobus placidus DSM 10642]
          Length = 618

 Score =  275 bits (703), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 130/639 (20%), Positives = 261/639 (40%), Gaps = 86/639 (13%)

Query: 35  AKKAVAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQ------SI 88
            K  VA   +GK  ++++ +    +  I+ E   + AV   +   I+  A +       +
Sbjct: 17  KKTKVAEDFDGKGYEMNEVL----VAFISVEKGDNEAVAEKAVEEILDVAKKVKAERIML 72

Query: 89  WPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE 148
           +P   +     + D              +   ++ K M+++I  +    +    + K+ E
Sbjct: 73  YPYAHL--SSNLSD-------------PETAVRLLKYMEDLIKNEYEVHRAPFGYYKSFE 117

Query: 149 LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYW 208
           +    K     E+   I  +E                       +V K  K  + A +YW
Sbjct: 118 IS--CKGHPLSELSREIKGEEE----------------------EVTKALKDEEKAVSYW 153

Query: 209 RGDSNRPMLSRIYGTAWNTQQELTQ-----YLYFLEESEKRDHRKLAREMDL-FHIAEDG 262
              +    L  +    +   ++L +             +   H +L R ++L  +     
Sbjct: 154 YILTEDKKLVEVDKFDFTNYEKLRKFVKYEMEKRRAVDKIPPHVELMRRLELADYEEASD 213

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG + ++ KG  +   + S++  K  D    E+ TP + D+       + + + A  + +
Sbjct: 214 SGHLKYYPKGRLVKSLIESFVTEKCVDFGAMEVETPIMYDRAHPTLRKYLERFPARQYII 273

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV-YRNEPSGSLHGL 380
           K       D R F L+   C G   +  +G+  YR LP+R+ E     +R E  G L GL
Sbjct: 274 K------GDKRDFFLRFAACFGQFLIAANGVIPYRSLPLRMYELTRYSFRKEQRGELVGL 327

Query: 381 MRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDA 439
            R+R FT  D H      E+   E  + + L + + K+ G      +++ R  K      
Sbjct: 328 RRLRAFTMPDMHTIVKDMEEAKREFFEQYKLSVEVLKELGIYPEDYEVAIRVTK-----D 382

Query: 440 LWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVD 499
            +++ ++ +  ++D +K      I   +      ++  KFE+   DA+ +     T+Q+D
Sbjct: 383 FFEENKDFIYSLVDVLKKP----ILIEMWDRRFFYFVLKFEFNFVDALDKASALSTVQID 438

Query: 500 FNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNL--------PLWLS 551
                R+  +Y +   EK  P+++H +  G++ER +  ++E     +        P+WLS
Sbjct: 439 VENAERYGIYYYDEKGEKRTPLILHCSASGAVERVMYALLEKAHMEMEKGKLPMLPVWLS 498

Query: 552 PIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
           P Q  V  ++   ++ A E+A +LK + + ++ D R ET++ KIR+ + + IP I + GD
Sbjct: 499 PTQVRVIPVSERHMDRALEVAEVLKKNKIRVDVDDREETVSKKIRDAATEWIPYIAVIGD 558

Query: 612 KEASER--SIGIR---RFGSTTTQKVSLLDAIPILTKES 645
           KE      ++ +R           ++S+ + +  + KE 
Sbjct: 559 KELESGKLTVTVRSESTLKEQKRVEMSVEELVERIKKEC 597


>gi|84490351|ref|YP_448583.1| threonyl-tRNA synthetase [Methanosphaera stadtmanae DSM 3091]
 gi|121731075|sp|Q2NE13|SYT_METST RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|84373670|gb|ABC57940.1| ThrS [Methanosphaera stadtmanae DSM 3091]
          Length = 614

 Score =  275 bits (702), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 103/505 (20%), Positives = 197/505 (39%), Gaps = 39/505 (7%)

Query: 159 VEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLS 218
            E+L++  A   V       +   C+G  +    +        +   +         M  
Sbjct: 102 AELLDNNEAVLRVPFGWYKSFELSCKGHPLSELSRTITTEPEEESEDSEEEPSEPSKMFI 161

Query: 219 RIYGTAWNTQQELTQYLYFLEE------------SEKRDHRKLAREMDLF-HIAEDGSGV 265
                     +E       L +             ++  H +L RE +L  +      G 
Sbjct: 162 LEEDGNIFDVEEYNYKNKTLRQLVDHEEGKTKDTGKQPPHVRLMREKELASNEPAADVGH 221

Query: 266 IFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCA 324
           I W+ KG  +   L  Y+ + + +     + TP + D        H + +    + +K  
Sbjct: 222 IRWYPKGKLVKDLLSDYVYQLVTQRGAMPVETPVMYDLANPAIREHAEKFGERQYRLKTK 281

Query: 325 DDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGS-VYRNEPSGSLHGLMRV 383
                  R   L+   C G   +      +++ +PV + E  +  +R E  G + GL R+
Sbjct: 282 H------RELMLRFACCFGAFRILADSFLTWKNMPVGIYELSTFSFRFERQGEVVGLKRL 335

Query: 384 RGFTQDDAHVFCT-KEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWD 442
           R FT  D H  C   +          ++      D      +            +   +D
Sbjct: 336 RAFTMPDFHSVCLNDDHAREVFANQVDMCAQTETDLDVHYEVAFRV--------TQDFFD 387

Query: 443 DAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNL 502
           + E+ +K V   +KN+ +  +   V+     ++  K ++   D +GR  +  T+Q+D   
Sbjct: 388 ENEDWIKEV---VKNNIKKPVLLEVIPKMKHYWNAKVDFAAIDDLGRPIENPTVQMDIQS 444

Query: 503 PSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE------NFKGNLPLWLSPIQAI 556
             RF   Y++ + E+ +P ++H +  GSIER I  ++E        K +LPLWL+P Q  
Sbjct: 445 AKRFGITYLDENEEQQYPTILHCSPTGSIERVICSLLEKTSTDKGNKPSLPLWLAPTQVR 504

Query: 557 VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASE 616
           +  +T + ++YA+EI   ++  ++ ++ D   E +  KIR    + IP  I+ GD E   
Sbjct: 505 IIPVTDNHLDYAKEIYQQIRDSNIRVDIDDTAERVGKKIRNAGKEWIPYTIVVGDNEVEN 564

Query: 617 RSIGIRRFGSTTTQKVSLLDAIPIL 641
            SI + R    T +++S+ D    +
Sbjct: 565 NSISVNRRVDNTKEEISIEDLAEEI 589


>gi|8039795|sp|Q58597|SYT_METJA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
          Length = 620

 Score =  274 bits (700), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 103/495 (20%), Positives = 190/495 (38%), Gaps = 43/495 (8%)

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL--- 235
           +   C+G  +    +     +  K  G   +     P    I     N    +       
Sbjct: 120 FKISCKGHPLSELSRKIVAKEEKKEEGEESKFYLLNPETEEIIELNENNINIIKDEELLA 179

Query: 236 --------YFLEESEKRDHRKLAREMDLFHIAEDGSGVIF-WHRKGWKIFQTLISYMRRK 286
                      +E ++  H K  +E D+    E      F W+ KG  +   L  Y+   
Sbjct: 180 LAKHELGIREHKEHDEPPHVKFIKEKDICSYEEASDPGHFRWYPKGKLMRDLLADYVYNL 239

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           + +     + TP + D        H D +    +  +  +      +   L+   C G  
Sbjct: 240 VVNMGAMPVETPIMYDLGNPAIREHADKFGERQYRFRQGN------KELMLRFAACFGQF 293

Query: 346 AVFNHGLKSYRELPVRLAEFGSV-YRNEPSGSLHGLMRVRGFTQDDAHVFCT-KEQMFNE 403
            +        R LP++L E  +  +R E  G L GL R+R FT  D H  C   EQ   E
Sbjct: 294 MMKKDMYLLPRYLPLKLYELSTYSFRYEQRGELVGLKRLRCFTMPDMHTVCLNLEQAMEE 353

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             K     +    D      ++   T+          +D+  +    +    KN     +
Sbjct: 354 FEKQFWECLKTGDDLNLSYSVIFRFTK--------DFFDEHRDWFFKIAKEYKNKYGKDV 405

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
              +L     ++  K +  + D++GR  +  T+Q+D     RF+     +  E  +P+++
Sbjct: 406 ILEILPKRKHYWVGKVDIAVIDSLGRPIENPTVQIDVESAKRFDIKVHTNEGE-IYPIIL 464

Query: 524 HRAVFGSIERFIGIMIE--------NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLL 575
           H +  GSIER +  ++E             LP+WLSPIQ  V  +     +YA ++A  L
Sbjct: 465 HCSPTGSIERVLCGLLEKAAIEAEKGNAPMLPVWLSPIQVRVIPVAERHYDYALKVAEKL 524

Query: 576 KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASER--SIGIR---RFGSTTTQ 630
           + +++  + D R E+++ KIR    + +P +++ GD+E      ++ IR          +
Sbjct: 525 RENNIRADFDDREESVSKKIRNAGKEWVPYVVVIGDEEMESDKLTVTIREKSTLKKPYKE 584

Query: 631 KVSLLDAIPILTKES 645
           K++L + I  + KE+
Sbjct: 585 KMTLDELIERIKKET 599


>gi|15669383|ref|NP_248192.1| threonyl-tRNA synthetase [Methanocaldococcus jannaschii DSM 2661]
 gi|1591826|gb|AAB99201.1| threonyl-tRNA synthetase (thrS) [Methanocaldococcus jannaschii DSM
           2661]
          Length = 624

 Score =  274 bits (700), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 103/495 (20%), Positives = 190/495 (38%), Gaps = 43/495 (8%)

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL--- 235
           +   C+G  +    +     +  K  G   +     P    I     N    +       
Sbjct: 124 FKISCKGHPLSELSRKIVAKEEKKEEGEESKFYLLNPETEEIIELNENNINIIKDEELLA 183

Query: 236 --------YFLEESEKRDHRKLAREMDLFHIAEDGSGVIF-WHRKGWKIFQTLISYMRRK 286
                      +E ++  H K  +E D+    E      F W+ KG  +   L  Y+   
Sbjct: 184 LAKHELGIREHKEHDEPPHVKFIKEKDICSYEEASDPGHFRWYPKGKLMRDLLADYVYNL 243

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           + +     + TP + D        H D +    +  +  +      +   L+   C G  
Sbjct: 244 VVNMGAMPVETPIMYDLGNPAIREHADKFGERQYRFRQGN------KELMLRFAACFGQF 297

Query: 346 AVFNHGLKSYRELPVRLAEFGSV-YRNEPSGSLHGLMRVRGFTQDDAHVFCT-KEQMFNE 403
            +        R LP++L E  +  +R E  G L GL R+R FT  D H  C   EQ   E
Sbjct: 298 MMKKDMYLLPRYLPLKLYELSTYSFRYEQRGELVGLKRLRCFTMPDMHTVCLNLEQAMEE 357

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             K     +    D      ++   T+          +D+  +    +    KN     +
Sbjct: 358 FEKQFWECLKTGDDLNLSYSVIFRFTK--------DFFDEHRDWFFKIAKEYKNKYGKDV 409

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
              +L     ++  K +  + D++GR  +  T+Q+D     RF+     +  E  +P+++
Sbjct: 410 ILEILPKRKHYWVGKVDIAVIDSLGRPIENPTVQIDVESAKRFDIKVHTNEGE-IYPIIL 468

Query: 524 HRAVFGSIERFIGIMIE--------NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLL 575
           H +  GSIER +  ++E             LP+WLSPIQ  V  +     +YA ++A  L
Sbjct: 469 HCSPTGSIERVLCGLLEKAAIEAEKGNAPMLPVWLSPIQVRVIPVAERHYDYALKVAEKL 528

Query: 576 KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASER--SIGIR---RFGSTTTQ 630
           + +++  + D R E+++ KIR    + +P +++ GD+E      ++ IR          +
Sbjct: 529 RENNIRADFDDREESVSKKIRNAGKEWVPYVVVIGDEEMESDKLTVTIREKSTLKKPYKE 588

Query: 631 KVSLLDAIPILTKES 645
           K++L + I  + KE+
Sbjct: 589 KMTLDELIERIKKET 603


>gi|256810117|ref|YP_003127486.1| threonyl-tRNA synthetase [Methanocaldococcus fervens AG86]
 gi|256793317|gb|ACV23986.1| threonyl-tRNA synthetase [Methanocaldococcus fervens AG86]
          Length = 618

 Score =  273 bits (698), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 104/495 (21%), Positives = 188/495 (37%), Gaps = 43/495 (8%)

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL--- 235
           +   C+G  +    +     +  K  G   +     P    +     N    +       
Sbjct: 118 FKISCKGHPLSELSRKIVAKEEKKEKGEESKFYLLNPETEEVVELNENNINIIKDEELLA 177

Query: 236 --------YFLEESEKRDHRKLAREMDLFHIAEDGSGVIF-WHRKGWKIFQTLISYMRRK 286
                      +E ++  H K  +E D+    E      F W+ KG  I   L  Y+   
Sbjct: 178 LAKHELGIKENKEHDEPPHVKFIKEKDICSYEEASDAGHFRWYPKGKLIRDLLADYVYNM 237

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           + +     + TP + D        H D +    +  +  +      +   L+   C G  
Sbjct: 238 VVNLGAMPVETPIMYDLGNPAIREHADKFGERQYRFRQGN------KELMLRFAACFGQF 291

Query: 346 AVFNHGLKSYRELPVRLAEFGSV-YRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
            +        R LP++L E  +  +R E  G L GL R+R FT  D H  C   +Q   E
Sbjct: 292 MMKKDMYLLPRYLPLKLYELSTYSFRYEQRGELVGLKRLRCFTMPDMHTVCLDLKQAMEE 351

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             K     +    D      ++   T+       D  +  A           KN     +
Sbjct: 352 FEKQFWECLKTGDDLDLSYSVIFRFTKYFFEEHRDWFFKIA--------KEYKNKYGKDV 403

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
              +L     ++  K +  + D++GR  +  T+Q+D     RFN     +  E  +P+++
Sbjct: 404 ILEILPKRKHYWVGKVDIAVIDSLGRPIENPTVQIDVESAKRFNIKVHTNEGE-VYPIIL 462

Query: 524 HRAVFGSIERFIGIMIE--------NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLL 575
           H +  GSIER +  ++E             LP+WLSPIQ  V  +     +YA +IA  L
Sbjct: 463 HCSPTGSIERVLCGLLEKAAIEAEKGKAPMLPVWLSPIQVRVIPVAERHYDYALKIAEKL 522

Query: 576 KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASER--SIGIR---RFGSTTTQ 630
           + +++  + D R ++++ KIR    + IP +++ GD+E      ++ +R          +
Sbjct: 523 RENNIRADFDDREDSVSKKIRNAGKEWIPYVVVVGDEEMDSGELTVTVREKSTLKKPHKE 582

Query: 631 KVSLLDAIPILTKES 645
           K++L + I  + KE+
Sbjct: 583 KMTLDELIDKIKKET 597


>gi|39939231|ref|NP_950997.1| threonyl-tRNA synthetase [Onion yellows phytoplasma OY-M]
 gi|39722340|dbj|BAD04830.1| threonyl-tRNA synthetase [Onion yellows phytoplasma OY-M]
          Length = 308

 Score =  273 bits (697), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 104/303 (34%), Positives = 173/303 (57%), Gaps = 15/303 (4%)

Query: 264 GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK 322
           G+ FW  KG  + + +  Y+  +++  DY  + TP + +  L++ SGH D Y +NMF + 
Sbjct: 9   GLPFWLPKGATVRRIVERYIVDKELSYDYHHVYTPIMANTELYRISGHLDHYASNMFPIM 68

Query: 323 CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMR 382
               T+++     L+PMNCP H+ ++     SY+ELP+R+AE G ++R E SG++ GL R
Sbjct: 69  ----TLENGEKLVLRPMNCPHHMMIYKKTPHSYKELPLRIAELGMMHRFEKSGAVSGLQR 124

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK----RVGSD 438
           VR  T +DAH+F   +Q+  E  KI NLI+ +Y+DF  +   ++LS R           D
Sbjct: 125 VREMTLNDAHIFACPDQIKEEMKKIINLILEVYRDFNIKNYELRLSYRDPNDTEKYFNDD 184

Query: 439 ALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
            +W  AE  +K  +  +    ++ I      GE AFYGPK +  +  A+G +    T+Q+
Sbjct: 185 QMWHHAEKTLKETIQELSLPFKEAI------GEAAFYGPKLDVQVFTALGNEETLSTVQL 238

Query: 499 DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVT 558
           DF LP +F+  ++   ++   PV+IHRAV  ++ERF+  ++E  KG  PLW +P+Q ++ 
Sbjct: 239 DFLLPQKFDLTFIGEDNKHHRPVVIHRAVVSTMERFLAHLVEETKGVFPLWFAPVQVLLI 298

Query: 559 TIT 561
            ++
Sbjct: 299 PVS 301


>gi|318079886|ref|ZP_07987218.1| threonyl-tRNA synthetase [Streptomyces sp. SA3_actF]
          Length = 368

 Score =  273 bits (697), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 114/373 (30%), Positives = 180/373 (48%), Gaps = 16/373 (4%)

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
              DH +L R + L+        G+ +    G  +   L  Y+R  ++ D Y+ +++P +
Sbjct: 8   RDHDHHRLGRALGLYGTDPLLGAGLPYLLPDGASVRHALEEYVRGLEVADGYQHVHSPVL 67

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             Q L+ +SGHW  YRA+MF              F L+P  CP H  ++    +SYRELP
Sbjct: 68  GKQELYVRSGHWAHYRADMFPPMEVG-----GEHFVLRPSLCPHHALIYRAQARSYRELP 122

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R EPSG+L GL RVR    +DAH+FC  E +  E      LI + Y+  G
Sbjct: 123 LRIAELGGMFRAEPSGTLGGLTRVRAIHLNDAHLFCAPESLAGEVAGALALIRTAYRALG 182

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAEN-IMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
                 +LS       G DA +  AE    +      +  +   ++     GE AFYGPK
Sbjct: 183 LAPSRYRLSLP-----GEDAKYALAEGVWERSAAALAEALAGAGLDWEEERGEAAFYGPK 237

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +   +DA GR++   T+Q DF+ P+ F   Y  +   +  PVM+HR+V GS+ER +  +
Sbjct: 238 IDVQARDAAGREFTLSTVQADFHQPTAFGLDYRAADGSRPRPVMVHRSVLGSLERVLARL 297

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSI-ETDFRNETINYKIRE 597
           IE   G  P WL+P+Q  V  +     E A+      ++  L          T+  ++R+
Sbjct: 298 IEVHGGAFPAWLAPVQVGVVPVGEEQEEAAESFVRRCRAAGLRARRYPAHAGTLAARVRQ 357

Query: 598 HSIKKIPIIIICG 610
             +  +P + + G
Sbjct: 358 ARL--VPHLAVLG 368


>gi|115397539|ref|XP_001214361.1| threonyl-tRNA synthetase, mitochondrial precursor [Aspergillus
           terreus NIH2624]
 gi|114192552|gb|EAU34252.1| threonyl-tRNA synthetase, mitochondrial precursor [Aspergillus
           terreus NIH2624]
          Length = 380

 Score =  272 bits (696), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 119/328 (36%), Positives = 166/328 (50%), Gaps = 40/328 (12%)

Query: 325 DDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVR 384
           D    +  ++ LKPMNCPGH  +F     SYRELP+R A+F  ++RNE SGSL GL RVR
Sbjct: 5   DGEAGEDESYGLKPMNCPGHCLLFKSQNHSYRELPIRYADFSPLHRNEVSGSLSGLTRVR 64

Query: 385 GFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE-KRVGSDALWDD 443
            F QDD H+FC  +Q+  E       +  +   FG     + LSTRPE   +GS ALWD 
Sbjct: 65  RFHQDDGHIFCRPQQIKGEIASALGFVDMVMTTFGLGPYRLVLSTRPEKDFIGSLALWDS 124

Query: 444 AENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLP 503
           AE  ++  LD+            +  G+GAFYGPK +  L+D  G+  Q  TIQ+D NLP
Sbjct: 125 AEAQLREALDSTGR------EWAMNEGDGAFYGPKIDIQLQDQTGKYHQLSTIQLDMNLP 178

Query: 504 SRFNAFYVNSHSE---------KCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQ 554
            RF   Y  +  E         +  PV++HRA FGS+ERF+ ++IE + G  P WLSP Q
Sbjct: 179 QRFGLEYQVAEGEEDYNPATPGRATPVLVHRANFGSLERFLALLIEQYAGRWPFWLSPRQ 238

Query: 555 AIVTTIT--SSAVEYAQEIANLLKSHHLSI--------------------ETDFRNETIN 592
            I+ T+    + V+ AQE A ++                           + D  + T+ 
Sbjct: 239 GIILTVNQDEAVVQQAQEAAGMIS--GFRALRPGDGTPTPLSSVDSTFLIDVDTSSTTLG 296

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIG 620
            KI+     K  +I I G K+ ++  I 
Sbjct: 297 KKIQRAKQMKYNLIFILGPKDVAQSRIT 324


>gi|168998640|ref|YP_001687908.1| hypothetical protein pK2044_00390 [Klebsiella pneumoniae
           NTUH-K2044]
          Length = 333

 Score =  272 bits (694), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 123/279 (44%), Positives = 171/279 (61%), Gaps = 10/279 (3%)

Query: 373 PSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
            SG+L+ +        ++A   CT EQ+  EC  I +L++ IYK FGFE++ +KLSTRPE
Sbjct: 63  KSGTLNIIT----LFDEEALDPCTLEQLEGECKSILHLVLDIYKQFGFEEVEIKLSTRPE 118

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
           KR+GSD  WD  EN +   L+         +   V  GEGAFYGPK E++L+DAIGRDWQ
Sbjct: 119 KRMGSDTDWDRLENALSASLEA------QGLQWSVNPGEGAFYGPKLEFVLRDAIGRDWQ 172

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
           CGT+QVD NLP RF+  Y+        PVM+HRA+FGS+ERF GI++E++ G LP WLSP
Sbjct: 173 CGTLQVDMNLPDRFDIGYIAEDGSTKRPVMLHRALFGSLERFTGILLEHYAGKLPAWLSP 232

Query: 553 IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
           +QA+V TIT     YA+++   L+   L  ETD RNE I YKIRE ++ +IP ++I GD 
Sbjct: 233 VQAVVMTITDKQHRYAEQVLKALRRKGLRCETDLRNEKIGYKIREQTLARIPFLLIIGDA 292

Query: 613 EASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           E +   + +R         + L +A   +     PP+ +
Sbjct: 293 EENAARVTVRDRTGKCMGTLLLNEAADCIEMCCRPPEVR 331



 Score = 71.7 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 3/84 (3%)

Query: 2  PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIE 60
             +  T PDGS+K      T  +VAESI  S+AK AV   I+G+  DL + V++ G++ 
Sbjct: 9  SEPLTFTLPDGSLKLVRKGTTLQNVAESIDSSVAKNAVYAEIDGQYIDLIEAVQKSGTLN 68

Query: 61 IITPEDPRSLAVIRHSCAHIMAEA 84
          IIT  D  +L     +   +  E 
Sbjct: 69 IITLFDEEALDP--CTLEQLEGEC 90


>gi|161528434|ref|YP_001582260.1| threonyl-tRNA synthetase [Nitrosopumilus maritimus SCM1]
 gi|238686913|sp|A9A2B1|SYT_NITMS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|160339735|gb|ABX12822.1| threonyl-tRNA synthetase [Nitrosopumilus maritimus SCM1]
          Length = 621

 Score =  272 bits (694), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 99/470 (21%), Positives = 202/470 (42%), Gaps = 34/470 (7%)

Query: 194 VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF-----LEESEKRDHRK 248
                K      +YW+  S    +  I    ++  ++L     +      +  E   H  
Sbjct: 146 TSDALKGESTIRSYWKIMSPDGTMINIGDYDFSNHKKLEILAKYESAKQRQVDEPPPHVA 205

Query: 249 LAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLW 305
           L +++ +  +  A D   + F+   G  +   +  Y+  ++K+    E+ TP + D    
Sbjct: 206 LMKKLAIADYEPASDSGNMRFF-PNGRLMKSLIERYVTDRVKEYGGYEVETPIMYDSEHP 264

Query: 306 QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEF 365
               +++ + A  + +        + +   L+   C G   + N    SY+ LP +L E 
Sbjct: 265 SMVSYFNRFPARQYNI------DSEGKKLFLRFAACFGQFLMANQFQMSYKNLPYKLYEL 318

Query: 366 GSV-YRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI-HNLIISIYKDFGFEKI 423
               +R E SG L GL R+R FT  D H FC       + +K+  +L  S+ K+ G ++ 
Sbjct: 319 TRYSFRREQSGELVGLRRLRAFTMPDCHAFCKDIPQAVDEIKVRFDLSQSVLKELGIDES 378

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
              ++ R           +D  N  K  ++ +       +   +   +  ++  K+E+  
Sbjct: 379 DYDMAIR---------FTEDFYNENKSAIEELVKKHGRPVLVEMWKEKFFYFVLKWEFNF 429

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE--- 540
            D +G+     T Q+D     R+   +V+ ++   HP+++H +  G+IER I  ++E   
Sbjct: 430 IDNLGKASALSTDQIDVENGDRYGIEFVDENNTAQHPIILHNSPSGAIERIIYALLEKAA 489

Query: 541 -----NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
                  K  LPLWL+P Q  +  +     ++   + + + + ++ ++ D RNE+I  +I
Sbjct: 490 DDSKKGKKPQLPLWLAPTQVRIIPLKEEFYDFCNNLCDKISAQNVRVDVDDRNESIGKRI 549

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           RE   + I  I++ G+KEA   ++ IR   +   ++VS  D +  + +++
Sbjct: 550 REAEKEWIQYILVIGEKEAGSENLSIRDRQTGNVREVSFDDFMNEINEQT 599


>gi|38639683|ref|NP_943452.1| theronyl-tRNA synthetase [Klebsiella pneumoniae]
 gi|38016781|gb|AAR07802.1| theronyl-tRNA synthetase [Klebsiella pneumoniae]
 gi|238549656|dbj|BAH66007.1| theronyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
          Length = 345

 Score =  272 bits (694), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 123/279 (44%), Positives = 171/279 (61%), Gaps = 10/279 (3%)

Query: 373 PSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
            SG+L+ +        ++A   CT EQ+  EC  I +L++ IYK FGFE++ +KLSTRPE
Sbjct: 75  KSGTLNIIT----LFDEEALDPCTLEQLEGECKSILHLVLDIYKQFGFEEVEIKLSTRPE 130

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
           KR+GSD  WD  EN +   L+         +   V  GEGAFYGPK E++L+DAIGRDWQ
Sbjct: 131 KRMGSDTDWDRLENALSASLEA------QGLQWSVNPGEGAFYGPKLEFVLRDAIGRDWQ 184

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
           CGT+QVD NLP RF+  Y+        PVM+HRA+FGS+ERF GI++E++ G LP WLSP
Sbjct: 185 CGTLQVDMNLPDRFDIGYIAEDGSTKRPVMLHRALFGSLERFTGILLEHYAGKLPAWLSP 244

Query: 553 IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
           +QA+V TIT     YA+++   L+   L  ETD RNE I YKIRE ++ +IP ++I GD 
Sbjct: 245 VQAVVMTITDKQHRYAEQVLKALRRKGLRCETDLRNEKIGYKIREQTLARIPFLLIIGDA 304

Query: 613 EASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           E +   + +R         + L +A   +     PP+ +
Sbjct: 305 EENAARVTVRDRTGKCMGTLLLNEAADCIEMCCRPPEVR 343



 Score = 71.7 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 3/84 (3%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIE 60
              +  T PDGS+K      T  +VAESI  S+AK AV   I+G+  DL + V++ G++ 
Sbjct: 21  SEPLTFTLPDGSLKLVRKGTTLQNVAESIDSSVAKNAVYAEIDGQYIDLIEAVQKSGTLN 80

Query: 61  IITPEDPRSLAVIRHSCAHIMAEA 84
           IIT  D  +L     +   +  E 
Sbjct: 81  IITLFDEEALDP--CTLEQLEGEC 102


>gi|321309543|ref|YP_004191872.1| threonyl-tRNA synthetase [Mycoplasma haemofelis str. Langford 1]
 gi|319801387|emb|CBY92033.1| threonyl-tRNA synthetase [Mycoplasma haemofelis str. Langford 1]
          Length = 501

 Score =  272 bits (694), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 113/404 (27%), Positives = 196/404 (48%), Gaps = 19/404 (4%)

Query: 226 NTQQELTQYLYFLEESEKR--DHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISY 282
             +          ++ E    DHR + + + +F      G+G+  W  +G  I + + +Y
Sbjct: 57  PDKDGFLLEWKDSKKEEVHEKDHRGIGKNLRIFDFDPLIGAGMPIWLERGHLIKEEIKNY 116

Query: 283 MRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           + R +  +    ++TP++  + L+Q SGHWD Y+ NMF     +        + L+PM C
Sbjct: 117 INRIQRNNGIAIVSTPELGKKELYQTSGHWDHYQENMFPSLSLEGEG----EYILRPMTC 172

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
           P H+ ++    +  ++LP+   E   ++R E SG L GL R R     D H+FC K Q+F
Sbjct: 173 PHHIILYKKQKRHEKQLPIAFGENARLHRYEYSGGLFGLERTRCMELIDTHLFCAKNQIF 232

Query: 402 NECLKIHNLIISIYKDFGFEKIMV----KLSTRPEKRVGSDALWDDAENIMKGVLDTIKN 457
               K+  +I  I + F  E   +    +     +K    + LW  +E  +K  LD+   
Sbjct: 233 ESLDKVFGIIQDIKEAFEIEYHSIVLSLRDVNNKDKFFDDENLWSLSEGSLKEFLDS--- 289

Query: 458 SSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK 517
               +I     +G+ AFYGPK ++ ++   G+     TIQ+DF+LP +F   Y     + 
Sbjct: 290 ---KKIEYVEGIGDAAFYGPKIDFQIETYAGKIITISTIQLDFSLPQKFELKYTGMDEKD 346

Query: 518 CHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLK 576
             P+MIH  + G++ERFI  ++E   G LP WLSP Q  +  +   S ++  +++ N  +
Sbjct: 347 HEPIMIHVGIIGTLERFIAYLLERNNGWLPFWLSPTQVTLIPVNRDSHLDSVRKLENFYR 406

Query: 577 SHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
           S ++ +E D    ++  KI +   K+    +I GDKEA E ++ 
Sbjct: 407 SKNIRVEVDQSGLSLGKKIAKAIEKRSFGFMIVGDKEAQELNVA 450


>gi|159904883|ref|YP_001548545.1| threonyl-tRNA synthetase [Methanococcus maripaludis C6]
 gi|238686928|sp|A9A6L7|SYT_METM6 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|159886376|gb|ABX01313.1| threonyl-tRNA synthetase [Methanococcus maripaludis C6]
          Length = 622

 Score =  270 bits (690), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 86/419 (20%), Positives = 166/419 (39%), Gaps = 32/419 (7%)

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIF-WHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVL 300
           +  H K  +E ++           F W+ KG  I   L  Y+   + +     + TP + 
Sbjct: 197 EPPHVKYIKEKEICDYEPSSDAGHFRWYPKGKLIRDLLSDYVYNLVVERGGMPVETPVMY 256

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D        H D +    +  K  +      +   L+   C G   +        + +P+
Sbjct: 257 DLQNNAIREHADKFGERQYRFKQGN------KDLMLRFAACFGQFMMKKDMYLLPKHMPL 310

Query: 361 RLAEFGSV-YRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDF 418
           +L E  +  +R E  G L GL R+R FT  D H  C   +   E  +    + +    DF
Sbjct: 311 KLYELSTYSFRYEQRGELVGLKRLRAFTMPDMHTVCIDMKQAMEAFEDQLWMGLKTGDDF 370

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
                  K       R   D   ++ E       +  +   +D I   +L G   ++  K
Sbjct: 371 -------KTPYAIIFRFTEDFFEENKEWFFGMAKEYKQKYGKDAI-LEILPGRKHYWVGK 422

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +  + D+ GR  +  T+Q+D     RF     +   +K HP+++H +  GS+ER +  +
Sbjct: 423 VDMAVVDSFGRPIENPTVQIDVESAERFGIVVHDGD-KKVHPIILHCSPTGSVERVLCGL 481

Query: 539 IENFK--------GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
           +EN            LP WL+P+QA V  +      +A ++A  L++  +  + D R ++
Sbjct: 482 LENAYLNTLENRPPALPTWLTPVQARVIPVGDKHSAFALDVATKLRASGIRADFDDREDS 541

Query: 591 INYKIREHSIKKIPIIIICGDKEASER--SIGIR---RFGSTTTQKVSLLDAIPILTKE 644
           +  K+R      +  +++ GD E      ++ +R          +++++ + I  +T +
Sbjct: 542 MGKKVRNAGTDWVNYVVVIGDSEMESGKLTVTVREESELKKAKKEELTVEELIEKITSD 600


>gi|11498158|ref|NP_069384.1| threonyl-tRNA synthetase [Archaeoglobus fulgidus DSM 4304]
 gi|3334363|sp|O29703|SYT_ARCFU RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|2650076|gb|AAB90685.1| threonyl-tRNA synthetase (thrS) [Archaeoglobus fulgidus DSM 4304]
          Length = 619

 Score =  270 bits (689), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 104/462 (22%), Positives = 201/462 (43%), Gaps = 37/462 (8%)

Query: 206 AYWRGDSNRPMLSRIYGTAWNTQQELTQYL-----YFLEESEKRDHRKLAREMDL-FHIA 259
           +YW   +    L  +    +   ++L +++               H +  R ++L  +  
Sbjct: 152 SYWYILTPEKELVEVEKFDFTGYEKLRKFVNYEIAKRRAVDVTPPHVEYMRRLELADYEP 211

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANM 318
              SG I ++ KG  +   L  ++ RK  D    E+ TP + D++      + + + A  
Sbjct: 212 ASDSGHIRYYPKGRLVKTLLEQFITRKCIDYGAMEVETPIMYDRNHPTLRRYLERFPARQ 271

Query: 319 FAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV-YRNEPSGSL 377
           + +K       D R F L+   C G   + +    +YR LP+++ E     +R E  G L
Sbjct: 272 YIIK------GDKREFFLRFAACFGQFLMLSSSTITYRNLPLKIYELTRYSFRKEQRGEL 325

Query: 378 HGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
            GL R+R FT  D H      EQ   E    + L + + ++ G E    +++ R      
Sbjct: 326 VGLRRLRAFTMPDMHTVAKDMEQAKEEFFNQYRLSVEVLREIGLEPEDYEVAVRI----- 380

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
           +   +++    +  ++D +K      I   +      ++  KFE+   DA+ +     T+
Sbjct: 381 TKDFYEENREFVHSLVDILKKP----ILIEMWDHRFFYFVLKFEFNFVDALDKASALSTV 436

Query: 497 QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK--------GNLPL 548
           Q+D     R+   +V+S  ++ HP ++H +V G++ER +  ++E  K          LP+
Sbjct: 437 QIDVENAERYGITFVDSDGKEKHPYILHCSVSGAVERVMYALLEKAKFMLDEGRLPMLPV 496

Query: 549 WLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIII 608
           WLSP Q  V  ++   V+ A +IA+ +  + + ++ D RNET+  KIR+   + IP I +
Sbjct: 497 WLSPTQVRVIPVSERFVDAAIKIADDIARNGIRVDVDDRNETLGKKIRDAQTEWIPYIAV 556

Query: 609 CGDKEASERSIGIRRFGSTTTQ-----KVSLLDAIPILTKES 645
            G+KE     + +     +T +     ++S  +    +  E 
Sbjct: 557 VGEKEIESGKLAVTVRAESTQKEQKRVEMSAEELAERVRSEC 598


>gi|150403333|ref|YP_001330627.1| threonyl-tRNA synthetase [Methanococcus maripaludis C7]
 gi|166223356|sp|A6VJ50|SYT_METM7 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|150034363|gb|ABR66476.1| threonyl-tRNA synthetase [Methanococcus maripaludis C7]
          Length = 622

 Score =  269 bits (688), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 100/497 (20%), Positives = 192/497 (38%), Gaps = 46/497 (9%)

Query: 179 WFDLCRGPHVRS-----TGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYG---TAWNTQQE 230
           +   C+G  +       T + K+  K  K+   ++  +     L+ +     +    +  
Sbjct: 119 FKISCKGHPLSELSRKITTERKEEVKKEKIVSKFYIINGENLELTEVNDEIISKMEDKGL 178

Query: 231 LTQYLYFLEESEK------RDHRKLAREMDLFHIAEDGSGVIF-WHRKGWKIFQTLISYM 283
           L    + L+  E+        H K  +E ++           F W+ KG  I   L  Y+
Sbjct: 179 LALLKHELDIKEEGTEKGEPPHVKYIKEKEICDYEPSSDAGHFRWYPKGKLIRDLLSDYV 238

Query: 284 RRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
              + +     + TP + D        H D +    +  K  +      +   L+   C 
Sbjct: 239 YNLVVERGGMPVETPVMYDLQNNAIREHADKFGERQYRFKQGN------KDLMLRFAACF 292

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSV-YRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
           G   +        + +P++L E  +  +R E  G L GL R+R FT  D H  C   +  
Sbjct: 293 GQFMMKKDMYLLPKHMPLKLYELSTYSFRYEQRGELVGLKRLRAFTMPDMHTVCIDMKQA 352

Query: 402 NECLK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQ 460
            E  +    + +    DF       K       R   D   ++ +       +  +   +
Sbjct: 353 MEAFEDQLWMGLKTGDDF-------KTPYAIIFRFTEDFFEENKDWFFGMAKEYKQKYGK 405

Query: 461 DRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHP 520
           D I   +L G   ++  K +  + D+ GR  +  T+Q+D     RF     +   +K HP
Sbjct: 406 DAI-LEILPGRKHYWVGKVDMAVVDSFGRPIENPTVQIDVESAERFGIVVHDGD-KKVHP 463

Query: 521 VMIHRAVFGSIERFIGIMIENFK--------GNLPLWLSPIQAIVTTITSSAVEYAQEIA 572
           +++H +  GS+ER +  ++EN            LP WL+PIQA V  +     E+A E+A
Sbjct: 464 IILHCSPTGSVERVLCGLLENAYLNTLENKPPALPTWLTPIQARVIPVGDKHEEFALEVA 523

Query: 573 NLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASER--SIGIR---RFGST 627
           N L++  +  + D R +++  K+R      +  +++ GD E      ++ IR        
Sbjct: 524 NKLRASGIRADFDDREDSMGKKVRNAGTDWVNYVVVIGDNEMETGKLTVTIREESELKKA 583

Query: 628 TTQKVSLLDAIPILTKE 644
             + +++ + I  +T +
Sbjct: 584 KKEALTVEELIEKITSD 600


>gi|134046250|ref|YP_001097735.1| threonyl-tRNA synthetase [Methanococcus maripaludis C5]
 gi|166223355|sp|A4FZ87|SYT_METM5 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|132663875|gb|ABO35521.1| threonyl-tRNA synthetase [Methanococcus maripaludis C5]
          Length = 622

 Score =  269 bits (687), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 88/419 (21%), Positives = 165/419 (39%), Gaps = 32/419 (7%)

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIF-WHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
           +  H K  +E ++           F W+ KG  I   L  Y+   + +     + TP + 
Sbjct: 197 EPPHVKYIKEKEICDYEPSSDAGHFRWYPKGKLIRDLLSDYVYNLVVENGGMPVETPVMY 256

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D        H D +    +  K  +      +   L+   C G   +        + +P+
Sbjct: 257 DLQNNAIREHADKFGERQYRFKQGN------KDLMLRFAACFGQFMMKKDMYLLPKHMPL 310

Query: 361 RLAEFGSV-YRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDF 418
           +L E  +  +R E  G L GL R+R FT  D H  C   +   E  +    + +    DF
Sbjct: 311 KLYELSTYSFRYEQRGELVGLKRLRAFTMPDMHTVCIDMKQAMEAFEDQLWMGLKTGDDF 370

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
                  K       R   D   ++ E       +  +   +D I   +L G   ++  K
Sbjct: 371 -------KTPYAIIFRFTEDFFEENKEWFFGMAKEYKQKYGKDAI-LEILPGRKHYWVGK 422

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +  + D+ GR  +  T+Q+D     RF     +   +K  P+++H +  GS+ER +  +
Sbjct: 423 VDMAVVDSFGRPIENPTVQIDVESAERFGIVVHDGD-KKVQPIILHCSPTGSVERVLCGL 481

Query: 539 IENFK--------GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
           +EN            LP WL+PIQA V  +     E+A E+A  L++  +  + D R ++
Sbjct: 482 LENAYLNTLENKPPALPTWLTPIQARVIPVGDKHAEFALEVATKLRASGIRADFDDREDS 541

Query: 591 INYKIREHSIKKIPIIIICGDKEASER--SIGIR---RFGSTTTQKVSLLDAIPILTKE 644
           +  K+R      +  +++ GD E      ++ +R          + +++ + I  +T +
Sbjct: 542 MGKKVRNAGTDWVNYVVVIGDSEMESSKLTVTVREESELKKAKKESLTVEELIEKITSD 600


>gi|268323272|emb|CBH36860.1| threonyl-tRNA synthetase [uncultured archaeon]
          Length = 626

 Score =  269 bits (687), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 98/447 (21%), Positives = 183/447 (40%), Gaps = 30/447 (6%)

Query: 193 QVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWN--TQQELTQYLYFLEESEKRDHRKLA 250
           + K      K    ++  D    + S           +  + +     E  +   H +L 
Sbjct: 148 KSKALEAEEKAESHFFFMDEEGNLTSDFEFEEAANLKKFFVYESEKRREVDKIPPHVELM 207

Query: 251 REMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQ 307
           + +++  +  A D   + F+  KG  I   L  Y+R+ + +    E+ TP +        
Sbjct: 208 KRLEIADYEPASDPGNMRFY-PKGKLIKGLLEDYVRKSVSEYGAVEVETPIMYSTGHPAL 266

Query: 308 SGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGS 367
             + + + A  +++              L+   C G   +      SY+ LP+++ E   
Sbjct: 267 KDYLERFPARQYSMVGKGGKP----DLFLRFSACFGQFLMSKDMSISYKNLPLKIFELAP 322

Query: 368 VYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVK 426
            +R E  G L GL R+R FT  D H  C    +  +E  K +   I + +  GF     +
Sbjct: 323 SFRKEKRGELVGLRRLRKFTMPDMHTLCRDMNEALDEFKKQYEFCIQVLEGIGFSTSDYE 382

Query: 427 LSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDA 486
           ++ R  K               KG ++ +   +   +          ++  KFE+   DA
Sbjct: 383 VAIRFTKEFYD---------ANKGFVEDLVQIAGKPVLIECWDQRFFYFVLKFEFNFVDA 433

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE------ 540
           +G+     T+Q+D     R+   Y++++ EK  P+++H +  G+IER I  ++E      
Sbjct: 434 LGKASALSTVQIDVENAERYGITYIDANGEKKRPIILHCSPSGAIERCIYALLEKAYLEK 493

Query: 541 --NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
              F   LPLWLSP Q  +  +    +EY   I   L  + + ++ D R ET++ KIR+ 
Sbjct: 494 EGGFMPMLPLWLSPTQLRILPVAERHLEYIDSILPAL--NGIRVDVDDREETVSKKIRDA 551

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFG 625
             + IP + + GDKE   +++ +   G
Sbjct: 552 GREWIPYVAVVGDKEVENKTLSVTIRG 578


>gi|18312849|ref|NP_559516.1| threonyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
 gi|22654124|sp|Q8ZWK4|SYT_PYRAE RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|18160337|gb|AAL63698.1| threonyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
          Length = 608

 Score =  268 bits (685), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 95/456 (20%), Positives = 181/456 (39%), Gaps = 37/456 (8%)

Query: 207 YWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK-----RDHRKLAREMDLFHIAED 261
           Y+   +            +    +L   +      ++       + +  R+         
Sbjct: 152 YYVIITPNGEEHDPAKFNYANYGDLKALVEKEVFRKELGGGEPKYLEYLRKFGFEWEPMS 211

Query: 262 GSGVIFWHRKGWKIFQTLISY---MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANM 318
            +G + +  +   + + +  Y   + + +     +I    +          H   +   +
Sbjct: 212 DAGHMRYAPEATVMMELVEDYSYIVAKSLGIPVFKIRGTNMFKLSEKAIESHARLFGERL 271

Query: 319 FAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLH 378
           + V+   D         L+   C    A+    + SY+ LP  + E    YR+E  G   
Sbjct: 272 YIVESDTD-------LILRYAACFQQFAMAKDWVISYKHLPFGMLEIADSYRHEQPGETV 324

Query: 379 GLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGS 437
            L R+R F   D H+F    ++      K+H +I       G   + +   T    +   
Sbjct: 325 LLFRLRRFYMPDLHIFTKDLKEAMEVTYKLHEVIFREIGKLGRTYVSLYNVTEGFYKNHR 384

Query: 438 DALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ 497
           D L + A    K +L              VL G+  ++    E+ + D +GR  +  T Q
Sbjct: 385 DYLVELARREGKPIL------------VRVLPGQKYYWVLNVEFHIVDELGRPREIATFQ 432

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK--------GNLPLW 549
           +D     RF   YV+ +++  +PV+IH A+ GS+ER++  + +             LP W
Sbjct: 433 IDVGNAQRFGIKYVDENNQIKYPVIIHTAILGSVERYLYAVFDTMAKMEKEGKVPRLPTW 492

Query: 550 LSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIIC 609
           LSP+Q  V  ++   ++YA  IA++L++  + ++ D R ET++ KIR+     IP I++ 
Sbjct: 493 LSPVQVRVIPVSKENLKYAISIADVLEAEGIRVDIDDREETLSKKIRDAETSWIPYIVVV 552

Query: 610 GDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           G KE +E  I +R  G     K+ L + +  L  E+
Sbjct: 553 GSKEEAEGVIAVRERGGG-QYKIRLEELVKKLKDET 587


>gi|15679452|ref|NP_276569.1| threonyl-tRNA synthetase [Methanothermobacter thermautotrophicus
           str. Delta H]
 gi|3334360|sp|O27504|SYT_METTH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|2622569|gb|AAB85930.1| threonyl-tRNA synthetase [Methanothermobacter thermautotrophicus
           str. Delta H]
          Length = 605

 Score =  268 bits (685), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 99/422 (23%), Positives = 176/422 (41%), Gaps = 33/422 (7%)

Query: 236 YFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEE 293
                 E+  H +L RE  L         G + W+ +G  I   L  Y+   +  +    
Sbjct: 185 ELESSGEEPPHVRLMREKGLADYEPSADVGHLRWYPRGRLIRDLLADYVYMLVTSEGAMP 244

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           + TP + D        H + +    + +K         +   L+   C G   + +    
Sbjct: 245 VETPIMYDLEDEAIRVHAEKFGERQYRMKNR-------KELMLRYACCFGAFRILSDSFL 297

Query: 354 SYRELPVRLAEFGSV-YRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLI 411
           +++ LP  + E  +  +R E  G + GL R+RGFT  D H  C   +Q   E  +   + 
Sbjct: 298 TWKNLPASIYELSTYSFRLEKKGEVVGLKRLRGFTMPDLHTVCADLDQSLEEFARQVEMC 357

Query: 412 ISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
           +   +D      ++  +T        + + + A+ I K VL              +L   
Sbjct: 358 MRTGQDLQVNYEVIFRATADFYEEYREWVHEVADKIGKPVL------------LEILPSR 405

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
             ++  K ++   D +GR  +  T+Q+D     RF   YVNS  E+ +P+++H +  GSI
Sbjct: 406 KHYWIAKMDFAAIDYLGRPIENPTVQIDVESGERFGITYVNSDEEEVNPIILHCSPTGSI 465

Query: 532 ERFIGIMIENFK-------GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIET 584
           ER I  ++E            LPLWLSP Q  V  I    +EYA ++ + L +  +  + 
Sbjct: 466 ERVICSLLEKTAIEMDEKPPMLPLWLSPTQVRVLPIAERHMEYASDLVSELIAADVRADL 525

Query: 585 DFRNETINYKIREHSIKKIPIIIICGDKEASER-SIGIRRFGSTTTQKVSLLDAIPILTK 643
           D R+ET+  KIR  +   +P +++ GD E   + ++ +R  G      + L + I  +  
Sbjct: 526 DDRSETLGKKIRNAAQDWVPYVVVIGDSEMEGKLTVNVRETGEKLQ--MGLDELIERIRA 583

Query: 644 ES 645
           E+
Sbjct: 584 ET 585


>gi|329765249|ref|ZP_08256829.1| threonyl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
 gi|329138155|gb|EGG42411.1| threonyl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
          Length = 624

 Score =  268 bits (684), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 103/471 (21%), Positives = 200/471 (42%), Gaps = 34/471 (7%)

Query: 193 QVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELT-----QYLYFLEESEKRDHR 247
              +  K      +YW+  S    LS I    +    +L      +        E   H 
Sbjct: 148 MTSEALKGESKITSYWKILSPDGTLSNIGDFDFTKYPKLEILAKYESAKKRAVDEPPPHV 207

Query: 248 KLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHL 304
            L ++M +  +  A D   + F+   G  I   +  Y+  ++K+    E+ TP + D H 
Sbjct: 208 ALMKKMGIADYEPASDSGNMRFF-PNGRLIKSLIERYVTDRVKEYGGYEVETPIMYDSHH 266

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
                +++ + A  + +        + +   L+   C G   + N    SY+ LP +L E
Sbjct: 267 PSMVSYFNRFPARQYNI------DSEGKKLFLRFAACFGQFLMANEYQLSYKNLPYKLYE 320

Query: 365 FGSV-YRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEK 422
                +R E SG L GL R+R FT  D H FC   EQ   E     +L  ++ K+ G   
Sbjct: 321 LTRYSFRREQSGELVGLRRLRAFTMPDCHAFCKDIEQSIKEIKVRFDLSRNVLKELGIVD 380

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
              +++ R           +D  N  K  ++ +       +   +   +  ++  K+E+ 
Sbjct: 381 SDYEMAIR---------FTEDFYNENKSSIEELVKKHGRPVLVEMWKEKFFYFVLKWEFN 431

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-- 540
             D++G+     T Q+D    +R+   +V+ H+ + HP+++H +  G+IER + +++E  
Sbjct: 432 FVDSMGKASALSTDQIDVENGNRYGIEFVDEHNVRKHPIILHNSPSGAIERIVYVLLEKA 491

Query: 541 ------NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
                   K   PLWL+P Q  V  +          + + L S ++ ++ D RNE+I  +
Sbjct: 492 AQDIKEGRKPQFPLWLAPTQVRVIPLKEEFSSICDTLVDKLSSFNIRVDIDDRNESIGKR 551

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           IR+     I   ++ G+KEA+  ++ IR   +   ++++  + I  + +++
Sbjct: 552 IRDAEKDWIRYTLVIGEKEANSENLSIRDRQTGNVRELTFDNFINEINEQT 602


>gi|325957845|ref|YP_004289311.1| threonyl-tRNA synthetase [Methanobacterium sp. AL-21]
 gi|325329277|gb|ADZ08339.1| threonyl-tRNA synthetase [Methanobacterium sp. AL-21]
          Length = 614

 Score =  267 bits (683), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 94/418 (22%), Positives = 174/418 (41%), Gaps = 29/418 (6%)

Query: 239 EESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
              E+  H K+ RE  L         G + W+ KG  I   L  Y+   + +     + T
Sbjct: 195 STGEEPPHVKIMREKHLADYEPSADVGHLRWYPKGRLIRDLLADYVYNLVTERGAMPVET 254

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P + D        H + +    + +          +   L+   C G   V +    +++
Sbjct: 255 PIMYDLADDAIRVHAEKFGERQYRM------GTKNKELMLRYACCFGAFRVLSDSFLTWK 308

Query: 357 ELPVRLAEFGSV-YRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISI 414
            LPV + E  +  +R E  G + GL R+RGFT  D H  C   +    E     ++    
Sbjct: 309 NLPVGIYELSTYSFRLEKKGEVVGLKRLRGFTMPDLHTVCADVDHAMVEFDGQIDMCKQT 368

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
             D      ++  +T+       + ++  A+ I K VL              +L     +
Sbjct: 369 GIDLEVNYEVIMRATKDFFEENKEWVFSSADKIGKPVL------------LEILPERKHY 416

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           +  K ++   D +GR  +  TIQ+D     RF   Y++    + HP++IH +  GSIER 
Sbjct: 417 WIAKMDFAAIDYLGRPIENPTIQIDVESGERFGITYIDPDENEVHPIIIHCSPTGSIERV 476

Query: 535 IGIMIENFK-------GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR 587
           I  ++E            LP+WL+P Q  V  I     +YAQ+I   ++  ++ ++ D R
Sbjct: 477 ICSLLEKSAIERNFRPPMLPIWLTPSQVRVIPIAERHNDYAQDIVQKIRDQNVRVDLDER 536

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           +ET+  KIR  +   +P +I+ GD+E    ++ +    +    ++ + + +  + +E+
Sbjct: 537 HETVGKKIRNAAGDWVPYVIVIGDRELEGGAVTVNVRETNEKIEMDIDELVNRIHEET 594


>gi|298674446|ref|YP_003726196.1| threonyl-tRNA synthetase [Methanohalobium evestigatum Z-7303]
 gi|298287434|gb|ADI73400.1| threonyl-tRNA synthetase [Methanohalobium evestigatum Z-7303]
          Length = 637

 Score =  267 bits (683), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 108/562 (19%), Positives = 227/562 (40%), Gaps = 59/562 (10%)

Query: 111 EQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK-- 168
            +  S D   +  KK+++ ++      +           ++S     K   L  +     
Sbjct: 85  NELSSPDTAVKALKKIEKELSDKYEVKRAPFGW------YKSFNINCKGHPLSELSRTIR 138

Query: 169 -ENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNT 227
            E+ +    GE      G        V +  K  + A +YW   +    L  +    ++ 
Sbjct: 139 LESTSTSATGEST----GFESEEEEVVSEALKAEETAKSYWYVLTPDGELRDVDSFDFSD 194

Query: 228 QQELTQYLYF-----LEESEKRDHRKLAREMDL-FHIAEDGSGVIFWHRKGWKIFQTLIS 281
              L +++ +         +   H +L + + +  +     SG + ++ +G  I   L +
Sbjct: 195 HSNLERFVNYEISESRVVDKTPPHVELMKRLGIADYEQGSDSGNLRYYPRGRFIKSLLEN 254

Query: 282 YM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
           Y+    I+    E+ TP + D +      + D + A  ++++       D R   L+   
Sbjct: 255 YVLDEAIRSGAMEVETPIMYDMNHPTLKKYLDRFPARQYSIE------SDKRRLFLRFAA 308

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSV-YRNEPSGSLHGLMRVRGFTQDDAHVFCTK-E 398
           C G   + +    SY+ LP+++ E     +R E  G L G+ R+R FT  D H FC   +
Sbjct: 309 CFGQFLMSHDMTISYKNLPLKMVEMTRYSFRKEQRGELVGMKRLRSFTMPDMHTFCEDMD 368

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGS---DALWDDAENIMKGVLDTI 455
           Q  +E    + + I+   + G +    +++ R  +       D + + A+ + K VL  +
Sbjct: 369 QSISEFDDQYKMCINTLDNIGVDVDDYEVAIRFTRDFYENNKDFITEMAKTVNKPVLVEM 428

Query: 456 KNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS 515
            ++               ++  KFE+   DA+G+     T+Q+D      ++  Y++ + 
Sbjct: 429 WDT------------RFFYFVLKFEFNFIDALGKASALSTVQIDVENAETYDISYIDRNG 476

Query: 516 EKCHPVMIHRAVFGSIERFIGIMIENFKGNL--------PLWLSPIQAIVTTITSSAVEY 567
           E   P M+H +  G+IER I  ++E     +        P+WLSP Q  +  +     ++
Sbjct: 477 ESKRPTMLHCSPSGAIERCIYALLEKNAMKIDNGEVPMLPVWLSPTQVRIIPVHEHHFDF 536

Query: 568 AQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGST 627
           A++I   L   +  ++ D R +T+  KIRE   + IP +++ GD+E     + +     +
Sbjct: 537 AEKIYEQL---NCRVDIDDREDTVGKKIREAGREWIPYVVVIGDREIESGKLNVTIRSES 593

Query: 628 -----TTQKVSLLDAIPILTKE 644
                 + ++++ +    +  E
Sbjct: 594 LPKKPKSSEMTVEELNNRVLSE 615


>gi|145613850|ref|XP_363396.2| hypothetical protein MGG_01322 [Magnaporthe oryzae 70-15]
 gi|145020862|gb|EDK04991.1| hypothetical protein MGG_01322 [Magnaporthe oryzae 70-15]
          Length = 367

 Score =  267 bits (681), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 112/308 (36%), Positives = 161/308 (52%), Gaps = 27/308 (8%)

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
             +   + LKPMNCPGH  +F   L+SYR+LP+R A+F  ++RNE SG+L GL RVR F 
Sbjct: 17  DAEADEYGLKPMNCPGHCLIFASQLRSYRDLPIRYADFSPLHRNEVSGALSGLTRVRRFH 76

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP-EKRVGSDALWDDAEN 446
           QDD H+FC   Q+  E  +  + + + Y         + LSTRP +  +G  A WD AE 
Sbjct: 77  QDDGHIFCRPSQIEEEIRQTLSFVKTTYDTLKLGPYRLVLSTRPEDHYIGELAEWDQAET 136

Query: 447 IMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF 506
            +K  LD++           +  G+GAFYGPK + IL+D+ G++ Q  T+Q+DF LP RF
Sbjct: 137 ALKAALDSLGERW------TLNPGDGAFYGPKIDIILQDSDGKEHQTATVQLDFQLPKRF 190

Query: 507 NAFYVNSHSEKC---------HPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIV 557
              Y     E            PVMIHRAV GS+ER + ++IE++ G  P WL+P Q +V
Sbjct: 191 ELEYQAPPPENGDANATALLERPVMIHRAVLGSVERLMALLIEHYNGKWPFWLNPRQVMV 250

Query: 558 TTITSSAVEYAQ--EIANLL--KSHHLSI-------ETDFRNETINYKIREHSIKKIPII 606
            T+  +A   A+   + N L  +             + D    ++  KIRE   K    I
Sbjct: 251 VTVNDTARVVAKAFAVRNQLLGQEEGEVAASSQLAIDIDDSARSLPLKIREAKSKGYGAI 310

Query: 607 IICGDKEA 614
           +  G+ E 
Sbjct: 311 VTVGNHEV 318


>gi|20091717|ref|NP_617792.1| threonyl-tRNA synthetase [Methanosarcina acetivorans C2A]
 gi|22654112|sp|Q8TLX7|SYT_METAC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|19916894|gb|AAM06272.1| threonyl-tRNA synthetase [Methanosarcina acetivorans C2A]
          Length = 635

 Score =  267 bits (681), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 101/457 (22%), Positives = 188/457 (41%), Gaps = 35/457 (7%)

Query: 194 VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY-----LYFLEESEKRDHRK 248
           V +  K    A +YWR  +    L  +         +L Q+                H +
Sbjct: 159 VSEALKAEGTARSYWRILTPDGELHEVETFDLTPYPKLQQFVNYEISKSRAVERAPPHVE 218

Query: 249 LAREMDL-FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ 306
           L R ++L  +     SG + ++ KG  +   L +Y+     +    E+ TP + D +   
Sbjct: 219 LMRRLELADYEPGSDSGNMRYYPKGRLVKSLLENYVLDVATEFGAMEVETPLMYDMNHPT 278

Query: 307 QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFG 366
              + D + A  ++++       D R   L+   C G   + +    SY+ LP+R+ E  
Sbjct: 279 LKKYLDRFPARQYSIE------SDKRQMFLRFAACFGQFLMNHDMTISYKNLPLRMIEMT 332

Query: 367 SV-YRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDFGFEKIM 424
              +R E  G L GL R+R FT  D H  C          K  ++L I + ++ G     
Sbjct: 333 RYSFRKEQRGELVGLRRLRAFTMPDMHTLCEDMNQAVSQFKEQYDLCIDVLENVGIHIDD 392

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
            +++ R            D     K ++  +  +    +   +      ++  KFE+   
Sbjct: 393 YEVAIR---------FTRDFYESNKELVVNMAKTVNKPVLVEMWDTRFFYFVLKFEFNFV 443

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           DA+ +     T+Q+D     R++  YVN+  +   P+++H +  G+IER I  ++E    
Sbjct: 444 DALAKASALSTVQIDVENAERYDISYVNADGKLERPIVLHCSPSGAIERCIYALLEKAAM 503

Query: 545 NL--------PLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                     P+WLSP Q  +  I+   + +A+E++  L      ++ D R+ +I  K+R
Sbjct: 504 ETEEGKVPMLPVWLSPTQVRIVPISEKHLAFAEEVSKKL---DCRVDIDDRDLSIGKKVR 560

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
           E   + +P +++ GDKE  E +I +     +   K S
Sbjct: 561 EAGREWVPYVVVIGDKEMEEGTINVTVRAESEQNKPS 597


>gi|126459249|ref|YP_001055527.1| threonyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
 gi|166225487|sp|A3MTU4|SYT_PYRCJ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|126248970|gb|ABO08061.1| aminoacyl-transfer RNA synthetase, class II [Pyrobaculum
           calidifontis JCM 11548]
          Length = 607

 Score =  266 bits (680), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 101/578 (17%), Positives = 214/578 (37%), Gaps = 34/578 (5%)

Query: 82  AEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYL 141
             A  ++   V V  G   ++ F     ++   +++++      +       +   + Y+
Sbjct: 29  GAAANALVVFVSVERGDSSDEEFLRRVARDVVETAEKVKATAVVIYPYAHLSNDLARPYV 88

Query: 142 SHEKARELFESKKEAYKVEILESIPAKENVTLYRQ-GEWFDLCRGPHVRSTGQVKKFFKL 200
           + E   +L+E  K  +K E+ ++          +  G               +V K  + 
Sbjct: 89  AKEVVNKLYEVVKSEFKGEVYKAPFGYYKAFEVKCLGHPLAELSRSFKPEEARVAKAVEE 148

Query: 201 MKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE-KRDHRKLAREMDLFHIA 259
            +        D      +       + +  + + ++  E    +  +    R+       
Sbjct: 149 RRDVYLVLTPDGREHDPAAYSPADPDLKALIDKEVFKRELGGGEPRYLDYLRKFGFEWEP 208

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEI---NTPQVLDQHLWQQSGHWDSYRA 316
               G + +  +   + + +  Y  +  K     +       +          H   +  
Sbjct: 209 MSDVGHMRYGPEATVMMELVEDYAYQVAKSLGIPVFKIRGTNMFKLSEKAIETHARLFGE 268

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            ++ V+   D         L+   C    A+    + SYR LP  + E    YR+E  G 
Sbjct: 269 RLYIVESDTD-------LILRYAACFQQFAMAKDWVISYRNLPFGMLEIADSYRHEQPGE 321

Query: 377 LHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
              L R+R F   D H+F     +      K+H  I       G   + +   T    + 
Sbjct: 322 TVVLFRLRRFYMPDLHIFTKDLAEAVEVSYKVHEAIFREIGKLGRTYVSLYNVTEEFYKS 381

Query: 436 GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGT 495
             D L + A    K +L              +L  +  ++    EY + D +GR  +  T
Sbjct: 382 HRDYLVELARREGKPIL------------VRILPTQKYYWVLNVEYHIVDELGRPREIAT 429

Query: 496 IQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI--------ENFKGNLP 547
            Q+D     RF   YV+ +++  +PV+IH A+ GS+ER++  +         E     LP
Sbjct: 430 FQIDVGNAQRFGIKYVDENNQVKYPVIIHTAIIGSVERYLYAVFDTIAKAEREGKTPRLP 489

Query: 548 LWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIII 607
            WL+P+Q  +  +    +++A E+A+ L+   + ++ D R+ET++ +IR+     +P + 
Sbjct: 490 TWLAPVQVRIIPVARDNLKFAMEVADKLEEAGIRVDVDDRDETLSKRIRDAETSWVPYVC 549

Query: 608 ICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           + G KE    ++ +R  G    + ++  + I  + +E+
Sbjct: 550 VVGSKEEETGTLSVRIRGEGQAK-MTAEELIKRVREET 586


>gi|145590982|ref|YP_001152984.1| threonyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
 gi|166225486|sp|A4WIW5|SYT_PYRAR RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|145282750|gb|ABP50332.1| aminoacyl-transfer RNA synthetase, class II [Pyrobaculum
           arsenaticum DSM 13514]
          Length = 608

 Score =  266 bits (679), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 90/438 (20%), Positives = 170/438 (38%), Gaps = 32/438 (7%)

Query: 219 RIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQT 278
              G          +         +  +    R+           G + +  +   + + 
Sbjct: 169 NYAGLDDFKALVEKEVFKRELGGGEPKYLDYLRKFGFEWEPMSDVGHMRYAPEATVMMEL 228

Query: 279 LISYMRRKIKDDYEEI---NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFA 335
           +  Y     K     +       +     +    H   +   ++ V+   D         
Sbjct: 229 VEDYAYMVAKSLGIPVFKIRGTNMFKLSEYAIESHARLFGERLYVVESDTD-------LI 281

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC 395
           L+   C    A+    + SYR LP  L E    YR+E  G    L R+R F   D H+F 
Sbjct: 282 LRYAACFQQFAMVKDWVISYRHLPFGLLEIADSYRHEQPGETVLLFRLRRFYMPDLHIFT 341

Query: 396 TK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDT 454
              ++      K+H +I       G   + +   T    +   + L + A    K +L  
Sbjct: 342 KDLKEAMEVTFKLHEVIFREIGKLGRTYVSLYNVTEDFYKGHREYLVELARREGKPIL-- 399

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH 514
                       +L G+  ++    E+ + D +GR  +  T Q+D     RF   YV+ +
Sbjct: 400 ----------VRILPGQKYYWVLNVEFHIVDELGRPREIATFQIDVGNAQRFGIKYVDEN 449

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIENFK--------GNLPLWLSPIQAIVTTITSSAVE 566
           ++  +PV+IH A+ GS+ER++  + +             LP WLSP+Q  V  ++   ++
Sbjct: 450 NQVRYPVIIHTAILGSVERYLYAVFDTMAKMEKEGKTPRLPTWLSPVQTRVIPVSKENLK 509

Query: 567 YAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS 626
           YA  +A+LL++  + ++ D R ET++ KIR+     +P II+ G KE +E ++ +R  G 
Sbjct: 510 YAMAVADLLEAEGIRVDVDDREETLSKKIRDAETAWVPYIIVVGSKEEAEGTVTVRERGG 569

Query: 627 TTTQKVSLLDAIPILTKE 644
              +  +  +    + +E
Sbjct: 570 GQYKAKA-EELAKKIREE 586


>gi|73670405|ref|YP_306420.1| threonyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro]
 gi|121729403|sp|Q467V2|SYT_METBF RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|72397567|gb|AAZ71840.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Methanosarcina
           barkeri str. Fusaro]
          Length = 635

 Score =  265 bits (677), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 105/455 (23%), Positives = 191/455 (41%), Gaps = 35/455 (7%)

Query: 194 VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY-----LYFLEESEKRDHRK 248
           V +  K    A +YWR  +    L  I         +L Q+                H +
Sbjct: 159 VSEALKAEDTAKSYWRILTPDGELREIENFDLTPYPKLQQFVDYEISKSRAVERAPPHVE 218

Query: 249 LAREMDL-FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ 306
           L R ++L  +     SG + ++ KG  I   L +Y+     D    E+ TP + D +   
Sbjct: 219 LMRRLELADYEPGSDSGNMRYYPKGRLIKALLENYVLDVATDFGAMEVETPIMYDMNHPT 278

Query: 307 QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFG 366
              + D + A  ++++       D R   L+   C G   + +    SYR LP+R+ E  
Sbjct: 279 LKKYLDRFPARQYSIE------SDKRQMFLRFAACFGQFLMNHDMTISYRNLPLRMIEMT 332

Query: 367 SV-YRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIM 424
              +R E  G L GL R+R FT  D H  C   +Q  ++  K ++L I + ++ G     
Sbjct: 333 RYSFRKEQRGELVGLRRLRAFTMPDMHSLCEDMDQAVDQFKKQYDLCIDVLENIGIHIKD 392

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
            +++ R            D     K ++  +  +    +   +      ++  KFE+   
Sbjct: 393 YEVAIR---------FTKDFYESNKELIVNMARTVNKPVLVEMWDTRFFYFVLKFEFNFV 443

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           DA+ +     T+Q+D     R++  YVN+  +   P ++H +  G+IER I  ++E    
Sbjct: 444 DALAKASALSTVQIDVENAERYDISYVNADGKLERPTVLHCSPSGAIERCIYALLEKAAM 503

Query: 545 NL--------PLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                     P+WLSP Q  +  I+   V +A+E++  L      ++ D R+ +I  K+R
Sbjct: 504 ETEEGKVPMLPVWLSPTQVRIVPISEKHVAFAEEVSQKL---DCRVDIDDRDLSIGKKVR 560

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
           E   + +P +++ GDKE  + +I +     +  +K
Sbjct: 561 EAGREWVPYVVVIGDKEIEDGTINVTIRAESEQKK 595


>gi|1711654|sp|P52833|SYT_PSESY RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|1171431|gb|AAB05013.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. syringae]
          Length = 227

 Score =  265 bits (677), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 95/218 (43%), Positives = 137/218 (62%), Gaps = 6/218 (2%)

Query: 426 KLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKD 485
           KLSTRPEKRVGSD LWD AE+ +   LD+            +  GEGAFYGPK E+ LKD
Sbjct: 5   KLSTRPEKRVGSDELWDRAESALASALDSAGQP------YDLQPGEGAFYGPKIEFSLKD 58

Query: 486 AIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
            +GR WQCGT+Q+DFNLP R +A YV+  + + +PVM+HRA+ GS ERFIGI+IE+++G 
Sbjct: 59  CLGRVWQCGTLQLDFNLPIRLSAEYVSEDNSRKNPVMLHRAILGSFERFIGILIEHYEGA 118

Query: 546 LPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPI 605
            P WL+P QA++  IT    ++A E+   L       ++D RNE I +KIREH++ K+P 
Sbjct: 119 FPAWLAPTQAVIMNITDKQADFALEVEKTLAESGFRAKSDLRNEKIGFKIREHTLLKVPY 178

Query: 606 IIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +++ GD+E   +++ +R         + +      L +
Sbjct: 179 LLVIGDREVEMQTVAVRTREGADLGSMPVAQFAEFLAQ 216


>gi|332967848|gb|EGK06946.1| threonine--tRNA ligase [Desmospora sp. 8437]
          Length = 246

 Score =  265 bits (676), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 120/246 (48%), Positives = 169/246 (68%), Gaps = 3/246 (1%)

Query: 4   DIKLTFPDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEI 61
            + +  PDGS++ F     T  +VAESISR LAKKA+A  ++GK  DLS  V +G+ + I
Sbjct: 2   SVSIQLPDGSVRQFEGKRVTVREVAESISRGLAKKAIAGQVDGKTVDLSREVSDGAEVRI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +T EDP  L V RHS  H+MA+AV+ ++  V++ IGP+IEDGFYYD D  QP ++D+L +
Sbjct: 62  LTLEDPEGLEVYRHSATHLMAQAVKRLFSGVKLGIGPVIEDGFYYDMDLPQPLTADDLPK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE +M+ I   D P  ++ ++ E+A  ++E   +  K+E++  +P  E +TLY QGE+FD
Sbjct: 122 IEDEMRRIAKEDLPIARRVVTREEALRIYEEAGDELKLELIRELPEDEEITLYEQGEFFD 181

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPHV STG++K F KL+ VAGAYWRGDS   ML R+YG+ W  Q +L  YL  LEE+
Sbjct: 182 LCRGPHVPSTGKLKNF-KLLSVAGAYWRGDSENQMLQRVYGSIWPKQAQLEAYLKQLEEA 240

Query: 242 EKRDHR 247
           ++RDHR
Sbjct: 241 KERDHR 246


>gi|147835152|emb|CAN65677.1| hypothetical protein VITISV_002012 [Vitis vinifera]
          Length = 435

 Score =  265 bits (676), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 146/335 (43%), Positives = 204/335 (60%), Gaps = 15/335 (4%)

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GP V  T   +K  +L  VAGAYWRGD  + ML RIYGTAW  +++L  YL+F EE+++R
Sbjct: 39  GPQV--TLCNRKAVELESVAGAYWRGDEKKQMLQRIYGTAWENEEQLKAYLHFKEEAKRR 96

Query: 245 DHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           DHR+L  ++DLF I ++ G G++FWH KG  +   +    ++  I+  Y+ + TP V   
Sbjct: 97  DHRRLGIDLDLFSIQDEAGGGLVFWHPKGAIVRHIIEDSWKKIHIEHGYDLLYTPHVARA 156

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGH D YR NM++    +D +     + L+PMNCP H+ ++   L SYR+ P+R+
Sbjct: 157 DLWKTSGHLDFYRENMYSQITIEDEL-----YQLRPMNCPYHILIYKRKLHSYRDFPIRV 211

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AE G+VYR E SGSLHGL RVRGFTQDDAH+FC ++Q+ +E   + +LI  I   FGF K
Sbjct: 212 AELGTVYRYELSGSLHGLFRVRGFTQDDAHIFCLEDQIKDEIRGVLDLIEEILLQFGFSK 271

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V LSTRPEK VG+D +W+ A + ++  LD    S        +  G GAFYGPK +  
Sbjct: 272 YEVNLSTRPEKAVGADDIWEKATSALRDALDDKGWS------YRIDEGGGAFYGPKIDLK 325

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK 517
           ++DA+GR WQC TIQ                + E+
Sbjct: 326 IEDALGRKWQCSTIQASDQQLKANGIQAEVCNGER 360



 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 23/60 (38%), Gaps = 1/60 (1%)

Query: 573 NLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
             LK++ +  E     E     IR    ++I ++ + G KE   + + +R         +
Sbjct: 344 QQLKANGIQAEV-CNGERFPTLIRNSEKQRITLMAVVGPKEVETQIVTVRSRFGGELGTM 402


>gi|148643274|ref|YP_001273787.1| threonyl-tRNA synthetase [Methanobrevibacter smithii ATCC 35061]
 gi|166225460|sp|A5UMJ1|SYT_METS3 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|148552291|gb|ABQ87419.1| threonyl-tRNA synthetase, ThrS [Methanobrevibacter smithii ATCC
           35061]
          Length = 608

 Score =  264 bits (675), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 92/414 (22%), Positives = 168/414 (40%), Gaps = 30/414 (7%)

Query: 243 KRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
           +  H KL RE +L    +    G + W  KG  +   L  Y+   + D     I TP   
Sbjct: 193 EPPHVKLMREKELCDYESASDVGNLKWFPKGRLVRDLLADYVYNLVVDQGAMPIETPIFY 252

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D      + H   +    +            +   L+   C G   V      +++ LP 
Sbjct: 253 DLDNEAINVHAAKFGERQYRTDT-------KKNLMLRFACCFGAFRVMADPFITWKNLPA 305

Query: 361 RLAEFGSV-YRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDF 418
           +L E  +  +R E  G + GL R+R FT  D H FC        E  K  ++ I    D 
Sbjct: 306 KLYELSTYSFRFEKKGEVVGLKRLRAFTMPDFHSFCADMNSTLEEFSKQTDMCIQTGVDL 365

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
                ++  +T+       D ++   + I K VL              +L     ++  K
Sbjct: 366 DVNYEIIFRATKDFYDENKDWMYSIGKKIGKPVL------------LEILPERKHYWSCK 413

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++   D +GR  +  T+Q+D     RF+  Y+    ++ +P ++H +  GSIER I  +
Sbjct: 414 IDFAAIDYLGRPIENPTVQIDVESGKRFDITYLGEDGKEHYPTILHCSPTGSIERVICSL 473

Query: 539 IE-------NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           +E            LP WLSPI+  + T+     ++A E+ + + + ++ ++ D R+E++
Sbjct: 474 LEKTAIELDEKAPMLPTWLSPIEVRIITVGEDHKDFANELYDKINAENIRVDVDDRDESV 533

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
             KIR  + + IP I + GD E       +    +     +++ + I  +  ++
Sbjct: 534 GKKIRNAATEWIPYIFVVGDNEKESGVFSVTVRETGEKVDMTVDELIKEILDKT 587


>gi|126178716|ref|YP_001046681.1| threonyl-tRNA synthetase [Methanoculleus marisnigri JR1]
 gi|166225444|sp|A3CTJ9|SYT_METMJ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|125861510|gb|ABN56699.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Methanoculleus
           marisnigri JR1]
          Length = 611

 Score =  264 bits (675), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 92/413 (22%), Positives = 164/413 (39%), Gaps = 31/413 (7%)

Query: 246 HRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQH 303
           H  L R  +L         G   W  +G  I   L  Y+  + +      + TP + D  
Sbjct: 196 HVDLMRAKELVEYEPRADVGNHRWMPRGKLIRDLLSDYVLTQVLDYGGMPVETPVMYDLG 255

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
               + H   +    +  K  +      R   L+   C G  ++ +    S   LP++L 
Sbjct: 256 DAAIAEHAAKFGERQYRFKSGN------RDMMLRFAACFGMFSIMHDMHISPNTLPMKLY 309

Query: 364 EFGSV-YRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFE 421
           E  +  +R+E  G + GL R+R FT  D H  C   +       +   +     +D    
Sbjct: 310 ELSTYSFRHEQKGEVIGLKRLRAFTMPDMHTLCRDMDGALTAFEEQLAIGWKTGEDLETP 369

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + V   TR          ++  E  +KG++          +   VL     ++  K + 
Sbjct: 370 LVGVFRCTR--------DFFEQYELWVKGIVAKSGVP----MLIEVLSERTHYWIAKVDL 417

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
              DA GR  +  T+Q+D     RF+  Y      + HP ++H +  GSIER I  M+E 
Sbjct: 418 AAIDAQGRPIENPTVQIDVESADRFDIKYYAPDGTEVHPPILHCSPTGSIERVICAMLEG 477

Query: 542 FK----GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
                  + P WL+P Q  +  +    + +A+EI   L +  +  + D R+E++N KIRE
Sbjct: 478 TAAQEVPSFPTWLAPTQVRLVPVAERHICFAEEIDTRLNAAGIRADVDDRDESVNKKIRE 537

Query: 598 HSIKKIPIIIICGDKEASERS--IGIRRFGSTT---TQKVSLLDAIPILTKES 645
             +  +P + + GD+EA      + IR+         + ++  + +  +  E+
Sbjct: 538 AGMDWVPYVAVIGDQEAETGRLMVTIRKLSEKKKPFKESMTESELVQAVKLET 590


>gi|159041076|ref|YP_001540328.1| threonyl-tRNA synthetase [Caldivirga maquilingensis IC-167]
 gi|189083601|sp|A8MBZ5|SYT_CALMQ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|157919911|gb|ABW01338.1| threonyl-tRNA synthetase [Caldivirga maquilingensis IC-167]
          Length = 613

 Score =  264 bits (675), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 92/428 (21%), Positives = 166/428 (38%), Gaps = 32/428 (7%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           +   +   LE  E+  +     +           G + +      + + L  Y  +  K 
Sbjct: 185 DKEVFKRELEGKEQPRYIDYCLKFGFEWEPLSDVGHMRYGPYATVMLELLDDYSYQVAKS 244

Query: 290 DYEEI---NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA 346
               +       +        S H   +   M+  +             ++   C    A
Sbjct: 245 LGIPVFKVKGTNMFRLSDKAISEHAGLFGERMYITES-------DEELVMRYAACFQQFA 297

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECL 405
           +    + SYR LP+ + E    YR E  G      R+R F   D H+F    ++  +  L
Sbjct: 298 MIKDWVLSYRNLPLGMLEIADSYRYEQPGETVLCFRLRRFYMPDLHIFVKDLKEAMDVGL 357

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
           ++H  I    +  G + + +   ++       D L + A    K +L             
Sbjct: 358 RLHAKIFEEIRRIGRDYVSLYNVSKEFFDQNKDYLVELARREGKPIL------------V 405

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
            VL G   ++    EY + D + R  +  T Q D     RF   Y +  +   +PV+IH 
Sbjct: 406 RVLEGAKYYWVLNVEYHIIDELKRPREIATFQFDIGNAQRFGIKYRDEGNNIKYPVIIHT 465

Query: 526 AVFGSIERFIGIMIENFK--------GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKS 577
           A+ GSIERFI  +++             LP W++P+Q  V  ++S   E A E+A  ++ 
Sbjct: 466 AILGSIERFIFALLDTAAINEANGKVPALPTWITPVQVRVIPVSSGYNEGAIELARRIEE 525

Query: 578 HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
               +E D R+ET+  KIR+     +P I++ G++EA   S+ +R  G      +S+ + 
Sbjct: 526 AGFRVEVDDRDETVGRKIRDAETLWVPYIVVFGEREAKTGSLSVRVRGVGQV-SMSIEEL 584

Query: 638 IPILTKES 645
           +  L +E+
Sbjct: 585 LNRLNEET 592


>gi|315425261|dbj|BAJ46929.1| threonyl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum]
          Length = 593

 Score =  264 bits (674), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 93/424 (21%), Positives = 175/424 (41%), Gaps = 24/424 (5%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           E       L E  + +H K+ R + +       SG + +  +G  I+  +  Y  + +++
Sbjct: 164 EKEALGKGLNEVSEPEHGKVLRRLGIDWEELSDSGHMHYGPEGTIIYDLISDYASKIVRE 223

Query: 290 DYEEINT---PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA 346
               +       +          H   +   M+ V+       D R + ++   C    A
Sbjct: 224 LGFPVYFVKGTNLFSLESRPIREHASLFGQRMYKVEV------DGRPYVMRYAACFQQFA 277

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECL 405
           +  + + SYR LP  + E    YR E  G L    R+R  +  D HVFC    +      
Sbjct: 278 LARNWVISYRSLPFGMFEVADSYRLEQRGELVLGFRLRKMSMPDLHVFCRDIPEALQIVE 337

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
           KIH+ I S  +  G +   +         + S   +++     + +L   K   +  + +
Sbjct: 338 KIHDKIYSEIEKLGRDYYSLYN-------LTSRKFFEENRGFFQKLL---KREKKPVLLS 387

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
                   ++    EY + D  GR  + GT+Q+D     RF   YV    EK +PV++H 
Sbjct: 388 FYPENSSYYWVLNIEYHIIDKFGRPREIGTVQIDVGNAERFGITYVEKDGEKKYPVILHS 447

Query: 526 AVFGSIERFIGIMIEN----FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLS 581
           A+ G++ER++  +++         LP WL P Q  +  +     + A ++A  +  + + 
Sbjct: 448 ALIGTVERYLYAVVDTALSKTPPTLPTWLCPTQLRILPLNEKYNKRAVQLAEKITKYGIR 507

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           ++ D R ET+  K+ E     IP +   G KEA + ++ IR  G    +++ L   + ++
Sbjct: 508 VDVDDRPETLAKKVYEAETSWIPYVATLGPKEAKKGTLAIRIRGKKGVKQMRLKPLVKLI 567

Query: 642 TKES 645
            KE+
Sbjct: 568 QKET 571


>gi|315425492|dbj|BAJ47154.1| threonyl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum]
 gi|315427484|dbj|BAJ49088.1| threonyl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum]
 gi|315427502|dbj|BAJ49105.1| threonyl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum]
          Length = 608

 Score =  264 bits (674), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 93/424 (21%), Positives = 175/424 (41%), Gaps = 24/424 (5%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           E       L E  + +H K+ R + +       SG + +  +G  I+  +  Y  + +++
Sbjct: 179 EKEALGKGLNEVSEPEHGKVLRRLGIDWEELSDSGHMHYGPEGTIIYDLISDYASKIVRE 238

Query: 290 DYEEINT---PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA 346
               +       +          H   +   M+ V+       D R + ++   C    A
Sbjct: 239 LGFPVYFVKGTNLFSLESRPIREHASLFGQRMYKVEV------DGRPYVMRYAACFQQFA 292

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECL 405
           +  + + SYR LP  + E    YR E  G L    R+R  +  D HVFC    +      
Sbjct: 293 LARNWVISYRSLPFGMFEVADSYRLEQRGELVLGFRLRKMSMPDLHVFCRDIPEALQIVE 352

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
           KIH+ I S  +  G +   +         + S   +++     + +L   K   +  + +
Sbjct: 353 KIHDKIYSEIEKLGRDYYSLYN-------LTSRKFFEENRGFFQKLL---KREKKPVLLS 402

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
                   ++    EY + D  GR  + GT+Q+D     RF   YV    EK +PV++H 
Sbjct: 403 FYPENSSYYWVLNIEYHIIDKFGRPREIGTVQIDVGNAERFGITYVEKDGEKKYPVILHS 462

Query: 526 AVFGSIERFIGIMIEN----FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLS 581
           A+ G++ER++  +++         LP WL P Q  +  +     + A ++A  +  + + 
Sbjct: 463 ALIGTVERYLYAVVDTALSKTPPTLPTWLCPTQLRILPLNEKYNKRAVQLAEKITKYGIR 522

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           ++ D R ET+  K+ E     IP +   G KEA + ++ IR  G    +++ L   + ++
Sbjct: 523 VDVDDRPETLAKKVYEAETSWIPYVATLGPKEAKKGTLAIRIRGKKGVKQMRLKPLVKLI 582

Query: 642 TKES 645
            KE+
Sbjct: 583 QKET 586


>gi|254167083|ref|ZP_04873936.1| threonyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|197623939|gb|EDY36501.1| threonyl-tRNA synthetase [Aciduliprofundum boonei T469]
          Length = 612

 Score =  264 bits (674), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 102/523 (19%), Positives = 212/523 (40%), Gaps = 46/523 (8%)

Query: 153 KKEAYKV-----EILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQV--------KKFFK 199
             EA KV     ++L                +   C+G  +    +         +    
Sbjct: 85  PGEAMKVLEELEKMLSEKYEVHRAPFGWYKSFVISCKGHPLSELSKEIRGEAKEEESEAL 144

Query: 200 LMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF-----LEESEKRDHRKLAREMD 254
             +    YW        L  +    +++   L +++ +         E   H KL R ++
Sbjct: 145 KAEKRTTYWYIMDLNGELYDVDDFDYSSYPNLKKFVDYEISGTRAAKEIPPHVKLMRSLE 204

Query: 255 L-FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWD 312
           L  +     SG + ++ KG  I   +  Y+  K+ D    ++ TP + D +      + +
Sbjct: 205 LADYEPGSDSGNMRYYPKGKLIKALIEDYVENKVIDYGAMQVETPIMYDFNHPSLKSYLN 264

Query: 313 SYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV-YRN 371
            + A  + V    D       + L+   C G   + +    SYR LP+RL E     +R 
Sbjct: 265 RFPARQYIVLSGKDK------YFLRFAACFGQFLMMHDATISYRNLPLRLYEMAKYAFRR 318

Query: 372 EPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE-CLKIHNLIISIYKDFGFEKIMVKLSTR 430
           E  G L GL R+R FT  D H          E   + + + I + KDFG E    +++ R
Sbjct: 319 EQKGELSGLRRLRAFTMPDMHTLAADMPQAMEEFKRQYEMAIKVLKDFGLELGDYEVAIR 378

Query: 431 PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRD 490
             +       +++ ++ ++ ++  +       +   +      ++  KFE+   D++ + 
Sbjct: 379 FTR-----DFYEENKDFIRELVKLVNRP----VLIQMWDERFFYFVLKFEFNFVDSLNKA 429

Query: 491 WQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE--------NF 542
               T+Q+D     R+   Y + +  + +P ++H +  G++ER +  M+E          
Sbjct: 430 AALSTVQIDVENAERYGITYYDENGNEKYPYILHCSPSGAVERILYAMLEKADMDAKKGK 489

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
           K  LP+WLSP Q  +  +    +  + +  +  +S    ++ D R+ +++ KIR+   + 
Sbjct: 490 KPKLPVWLSPTQVRIIPVKDDFIGCSIQEMDYFRSEGFRVDIDDRDLSVSRKIRDAEKEW 549

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           IP I++ G+KE  +  + +R  G    +++   + + +L K++
Sbjct: 550 IPYIVVIGEKEKEKDILTVRIRGGG-VKEMKREELLALLKKDT 591


>gi|171185199|ref|YP_001794118.1| threonyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta]
 gi|229558458|sp|B1YD09|SYT_THENV RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|170934411|gb|ACB39672.1| Threonyl-tRNA synthetase editing domain protein [Thermoproteus
           neutrophilus V24Sta]
          Length = 609

 Score =  264 bits (674), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 89/427 (20%), Positives = 167/427 (39%), Gaps = 32/427 (7%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           E   +   L    +  + +  R+           G + +  +   + + +  Y     K 
Sbjct: 181 EKEVFKRELGGGSEPRYLEYMRKFGFEWEPMSDVGHMRYAPEATLMMELVEDYAYAVAKS 240

Query: 290 DYEEI---NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA 346
               +       +          H   +   ++ V+   D         L+   C    A
Sbjct: 241 LGIPVFKIRGTNMFKLSERAIESHARLFGERLYIVESDTD-------LILRYAACFQQFA 293

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECL 405
           +    + SYR+LP  + E    YR E  G    L R+R F   D H+F     +      
Sbjct: 294 MVKDWVISYRQLPFGMLEVADSYRLEQPGETVLLFRLRRFYMPDLHIFTKDLAEAMEVTF 353

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
           ++H  I       G   + +              + +D     +  L  +       I  
Sbjct: 354 RLHEAIFREIGKLGRTYVSLYN------------VTEDFYKAHRQYLVELARREGKPILV 401

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
            VL G+  ++    E+ + D +GR  +  T Q+D     RF   YV+ +++  +PV+IH 
Sbjct: 402 RVLPGQKYYWVLNVEFHIIDELGRPREIATFQIDVGNAQRFGIKYVDENNQTRYPVIIHT 461

Query: 526 AVFGSIERFIGIMI--------ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKS 577
           A+ GS+ER++  +         E     LP WLSP+Q  +  IT   ++YA E+A+  ++
Sbjct: 462 AILGSVERYLYAVFDTLARAEKEGKAPRLPTWLSPVQVRIIPITRDNLKYAVEVADKFEA 521

Query: 578 HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
             + ++ D R+ET++ +IR+  +  +P I + G KE +E  + +R  G     +V   D 
Sbjct: 522 EGIRVDVDDRDETLSKRIRDAEVAWVPYICVVGSKEEAEGVVSVRERGGG-QYRVKPEDL 580

Query: 638 IPILTKE 644
           I  + ++
Sbjct: 581 IKKIRED 587


>gi|150401612|ref|YP_001325378.1| threonyl-tRNA synthetase [Methanococcus aeolicus Nankai-3]
 gi|166223353|sp|A6UW94|SYT_META3 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|150014315|gb|ABR56766.1| threonyl-tRNA synthetase [Methanococcus aeolicus Nankai-3]
          Length = 630

 Score =  263 bits (673), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 99/415 (23%), Positives = 167/415 (40%), Gaps = 27/415 (6%)

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIF-WHRKGWKIFQTLISYMRRKI 287
            E+       E+  +  H K   E ++           F W+ KG  I   L  Y+   +
Sbjct: 191 HEMGIKHGGKEKDIEPPHVKFITEKEICDYEPSSDAGHFRWYPKGKLIRDLLQDYVYNMV 250

Query: 288 KDD-YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA 346
            ++    + TP + D        H D +    +  K  +      +   L+   C G   
Sbjct: 251 VENNGMPVETPVMYDLGNKAIKEHADKFGERQYRFKQGN------KDLMLRFAACFGQFM 304

Query: 347 VFNHGLKSYRELPVRLAEFGSV-YRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
           +        + LP++L E  +  +R E  G L GL R+RGFT  D H  C   +Q   E 
Sbjct: 305 MKKDMYILPKHLPLKLYELSTYSFRYEQRGELVGLKRLRGFTMPDMHTVCKDTKQTIEEF 364

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
                + +    D       +        R   D   ++ E   K   +  +   +D I 
Sbjct: 365 ENQFWMCLKTGDDLNTPYSTIF-------RFTEDFFEENKEWFFKVAKEYKEKYGKDVI- 416

Query: 465 TGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIH 524
             ++     ++  K +  + D+ GR  +  T+Q+D     RFN   V+  +EK +PV++H
Sbjct: 417 LELIPERKHYWVGKVDMAVIDSFGRPIENPTVQIDVESAKRFNIV-VHDGNEKTYPVILH 475

Query: 525 RAVFGSIERFIGIMIE--------NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLK 576
            +  GSIER +  ++E             LP+WLSPIQA V  +  +  EYA  +A  L+
Sbjct: 476 CSPTGSIERVLCGLLEKASLDADAGAPPMLPVWLSPIQARVIPVADAHSEYALSVAKKLR 535

Query: 577 SHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
            + +  + D R E++  KIR      +P +I+ GDKE     +       +T +K
Sbjct: 536 ENGIRADFDDREESVGKKIRNAGKDWVPFVIVIGDKEVENNILTTTIREKSTLKK 590


>gi|304313817|ref|YP_003848964.1| threonyl-tRNA synthetase [Methanothermobacter marburgensis str.
           Marburg]
 gi|302587276|gb|ADL57651.1| threonyl-tRNA synthetase [Methanothermobacter marburgensis str.
           Marburg]
          Length = 605

 Score =  263 bits (672), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 98/422 (23%), Positives = 178/422 (42%), Gaps = 33/422 (7%)

Query: 236 YFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEE 293
                 E+  H +L RE  L         G + W+ +G  I   L  Y+   +  +    
Sbjct: 185 ELESSGEEPPHVRLMREKGLADYEPSADVGHLRWYPRGRLIRDLLADYVYMLVTSEGAMP 244

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           + TP + D        H + +    + +K       + +   L+   C G   + +    
Sbjct: 245 VETPIMYDLEDEAIRVHAEKFGERQYRMK-------NKKELMLRYACCFGAFRILSDSFL 297

Query: 354 SYRELPVRLAEFGSV-YRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLI 411
           +++ LP  + E  +  +R E  G + GL R+RGFT  D H  C   EQ   E      + 
Sbjct: 298 TWKNLPASIYELSTYSFRLEKKGEVVGLKRLRGFTMPDLHTVCADLEQALTEFAGQVEMC 357

Query: 412 ISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
           +   +D      ++  +TR          +++  + +  V D I       I   +L   
Sbjct: 358 MKTGEDLQVNYEVIFRATR--------EFYEEYSDWVHSVADRIGKP----ILLELLPSR 405

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
             ++  K ++   D +GR  +  T+Q+D     RF   YVNS  E+ +P+++H +  GSI
Sbjct: 406 KHYWIAKMDFAAIDYLGRPIENPTVQIDVESGERFGITYVNSDEEEVNPIILHCSPTGSI 465

Query: 532 ERFIGIMIENFK-------GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIET 584
           ER I  ++E            LP+WLSP Q  V  I    +E+A+ + + + ++ +  + 
Sbjct: 466 ERVICSLLEKTAIEMDEKPPMLPVWLSPTQVRVLPIAERHLEFAESLVSEMTANDVRADL 525

Query: 585 DFRNETINYKIREHSIKKIPIIIICGDKEASER-SIGIRRFGSTTTQKVSLLDAIPILTK 643
           D R ET+  KIR  +   +P +++ GD E   + ++ IR  G      + L + I ++  
Sbjct: 526 DDRAETLGKKIRNAAQDWVPYVVVVGDSELEGKLTVNIRSTGEKVQ--MDLQELIELVRS 583

Query: 644 ES 645
           E+
Sbjct: 584 ET 585


>gi|119873200|ref|YP_931207.1| threonyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
 gi|166225488|sp|A1RV82|SYT_PYRIL RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|119674608|gb|ABL88864.1| Anticodon-binding domain protein [Pyrobaculum islandicum DSM 4184]
          Length = 609

 Score =  263 bits (672), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 89/428 (20%), Positives = 172/428 (40%), Gaps = 32/428 (7%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           +   +   L    +  +    R+      +    G + +  +   + + +  Y     K 
Sbjct: 181 DKEVFKKELSGGSEPRYLDYLRKFGFEWESMSDVGHMRYAPEATIMIELVEDYAYMVAKS 240

Query: 290 DYEEI---NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA 346
               +       +          H   +   ++ V+   D         L+   C    A
Sbjct: 241 LGIPVFKIRGTNMFKLSETAIESHARLFGERLYVVESDTD-------LILRYAACFQQFA 293

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE-QMFNECL 405
           +    + SY+ LP  + E    YR+E  G    L R+R F   D H+F     +  +   
Sbjct: 294 MVKDWVISYKHLPFGVIEIADSYRHEQPGETVLLFRLRRFFMPDLHIFTRDMAEAIDISF 353

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
           K+H +I    +  G   + +              + ++     K  L  +       I  
Sbjct: 354 KLHEVIFREIEKLGRTYVSLYN------------VTEEFYKEYKNYLIELAKREGKPILV 401

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
            +L G+  ++    E+ + D +GR  +  T Q+D     RF   YV+ +++  +PV+IH 
Sbjct: 402 RILPGQKYYWVLNVEFHIIDELGRPREIATFQIDIGNAKRFGIKYVDENNQVRYPVIIHT 461

Query: 526 AVFGSIERFIGIMIENFK--------GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKS 577
           A+ GS+ER++ ++ +             LP WLSP+Q  +  IT   ++YA EIA+ L++
Sbjct: 462 AILGSVERYLYVVFDTMAKAEKAGKIPRLPTWLSPVQVRIIPITRDNLKYAVEIADKLET 521

Query: 578 HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
             + ++ D R+ET++ KIR+  +  IP I + G KE +E  + +R  G    +     + 
Sbjct: 522 EGIRVDIDDRDETLSKKIRDAEVSWIPYICVVGSKEETEGVLSVRERGGGQYKTTP-EEL 580

Query: 638 IPILTKES 645
           I  + +E+
Sbjct: 581 IKKIKEET 588


>gi|58699832|ref|ZP_00374451.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|58533650|gb|EAL58030.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
          Length = 236

 Score =  263 bits (671), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 109/237 (45%), Positives = 152/237 (64%), Gaps = 6/237 (2%)

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
             +L+  +Y + GF +I VK S RP+ R G D +WD AE  +   +          ++  
Sbjct: 1   FCDLLKEVYSELGFNEISVKFSDRPDVRAGDDEVWDRAEKALLEAVKEAG------LSYE 54

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
           +  GEGAFYGPK E++LKDAIGR WQCGT+QVDF LP R  AFY+ +   K HPVM+HRA
Sbjct: 55  LSPGEGAFYGPKLEFVLKDAIGRSWQCGTLQVDFILPERLGAFYIGADGHKHHPVMLHRA 114

Query: 527 VFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF 586
           + G+ ERFIGI+IEN+ G  P+WL+P Q  + TIT+ A  YA +I+N+LK   + ++TD 
Sbjct: 115 ILGTFERFIGILIENYAGKFPVWLAPTQLAILTITNEADGYATKISNVLKEQGVRVKTDL 174

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            NE I+YKIR HS+ K+PI+ I G  E + +++ +R  GS   +  SL  AI +L K
Sbjct: 175 TNEKISYKIRLHSLNKVPILWIVGKNEVTSKTVSVRNLGSERQESFSLEKAIELLLK 231


>gi|154150426|ref|YP_001404044.1| threonyl-tRNA synthetase [Candidatus Methanoregula boonei 6A8]
 gi|166223354|sp|A7I6P0|SYT_METB6 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|153998978|gb|ABS55401.1| threonyl-tRNA synthetase [Methanoregula boonei 6A8]
          Length = 614

 Score =  262 bits (670), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 99/491 (20%), Positives = 181/491 (36%), Gaps = 41/491 (8%)

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAG---------AYWRGDSNRPMLSRIYGTAWNTQQ 229
           +   C+G  +    +     +  +V             W   +        +    NT  
Sbjct: 120 FKISCKGHPLSELSKTIVPGEEGEVVSKKLGKKEATHDWFVMTPDGKTHDYHKYLDNTPF 179

Query: 230 ---ELTQYLYFLEESEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRR 285
                 +         +  H  L R  +L         G + W  KG  I   +  Y+  
Sbjct: 180 GCLVKKELGVAEPTGGEPAHVDLMRSKELVDYEPASDVGCMRWMPKGKLIRDLMADYVLA 239

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
            +       + TP + D        H D +    +  K       + R   L+   C G 
Sbjct: 240 LLLPYGATPVETPVMYDLGDKAIYEHADKFGERQYRFK------SNNRDMMLRFAACFGM 293

Query: 345 VAVFNHGLKSYRELPVRLAEFGSV-YRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE 403
            ++      S   LP+++ E  +  +R+E  G + GL R+R FT  D H  CT      +
Sbjct: 294 FSIMRDMHISKNTLPMKMYELSTYSFRHEQKGEVIGLKRLRCFTMPDMHSLCTDMPEAMK 353

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
           C              G++      +        +   +D+ E  +K ++      S   +
Sbjct: 354 C-------FEEQLAIGWQTGRDFETKLVAAFRCTKKFYDENEAWVKKIVKE----SDCPM 402

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
              +L     ++  K +    D   R  +  T+Q+D    +RFN  Y        +P ++
Sbjct: 403 LIEILSERVHYWEAKIDLAAIDGQNRPIENPTVQIDVESSTRFNIKYFKDDGTPVYPPIL 462

Query: 524 HRAVFGSIERFIGIMIENFK----GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH 579
           H +  GS+ER I  ++EN        LP WLSP+QA V  +      YAQEI + L +  
Sbjct: 463 HCSPTGSVERVICAILENISTQKVPALPTWLSPVQARVVPVAERHTAYAQEICDALNAQG 522

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASER--SIGIRRFGSTT---TQKVSL 634
           +  + D R+E++  K+RE  +  +P +I+ GD+E + +  ++ IRR         ++++ 
Sbjct: 523 IRCDLDERDESVGKKVREAGMDWVPYVIVIGDEEMASKKLTVTIRRKSEPNKPFKEQMTT 582

Query: 635 LDAIPILTKES 645
                 +  E+
Sbjct: 583 DALAATIKNET 593


>gi|218884527|ref|YP_002428909.1| threonyl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n]
 gi|218766143|gb|ACL11542.1| threonyl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n]
          Length = 614

 Score =  262 bits (670), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 95/484 (19%), Positives = 179/484 (36%), Gaps = 35/484 (7%)

Query: 179 WFDLCRGPHVRSTGQV--KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           +   C G  +    +   K      ++    +   +    L       +    EL   + 
Sbjct: 123 FTLECYGHPLSELSKTIKKSETVAKRIIEKKFYIMTPDGSLHDPTSFDYTNYPELKILVD 182

Query: 237 FLEESEK-----RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDY 291
                ++         +  R+           G + +      I + ++ Y     +   
Sbjct: 183 KEVFGKELTGGENRVNEYCRKFGFEWEPMSDHGHMRYGPHATVIMEAVMRYSWMVAQSLG 242

Query: 292 EEI---NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
             +       + +        H   +   ++ V+       D   F L+   C    A+ 
Sbjct: 243 IPVFKVMGSNMFNLKEKPVYEHAVLFGDRLYEVQL------DEDRFILRYAACHQQFAML 296

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
              + SY++LP  + E    YR E  G L    R+R F   D H+            +  
Sbjct: 297 RDWVISYKDLPFGVFEVADSYRLEQRGELALCFRLRKFYMPDLHILTR------NIGEAI 350

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
           ++ + +      E      S      + +D   +   + +           +  +   V+
Sbjct: 351 DVSMRVQAKIHEEAGKAGRSYVALYNI-TDEFLEKYRDKLVE----FVKREKYPVLLAVI 405

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
                ++    EY + D + R  +  T Q+D     RFN  YV+   EK HPV+IH A+ 
Sbjct: 406 PSGIYYWVLNVEYHIIDNLKRPREIATFQIDVGNGRRFNIAYVDEKGEKHHPVIIHTALL 465

Query: 529 GSIERFI------GIMIENFK--GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHL 580
           G +ER+I      G +IE       +P W+SP+Q  +  ++    E+A +IA  + SH  
Sbjct: 466 GGVERYIYMVLDTGALIEASGQTPYIPTWMSPVQVRIVPVSKEYNEHAFKIAGEILSHGF 525

Query: 581 SIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
            ++ D R+ET+  KIR+   + IP II+ G++E +  +I IR   S   + + L + I +
Sbjct: 526 RVDVDDRDETLGKKIRDAGKEWIPYIIVVGEREVNTGTINIRVRRSNDQRVMKLEEFIKL 585

Query: 641 LTKE 644
           L +E
Sbjct: 586 LEEE 589


>gi|255024220|ref|ZP_05296206.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL J1-208]
          Length = 279

 Score =  262 bits (670), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 121/280 (43%), Positives = 188/280 (67%), Gaps = 4/280 (1%)

Query: 45  GKVCDLSDPV-REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG 103
           G++ DL  P+  +G+IEI+TP+   +L ++RHS AH+MA+A++ ++P+V+  +GP I+ G
Sbjct: 1   GELLDLVTPIHEDGAIEIVTPDHEDALGILRHSTAHLMAQALKRLYPDVKFGVGPAIDTG 60

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE 163
           FYYD D E   S + L +IEK+MQ+I+  + P  ++ +S E+A + F++  + YK+E++E
Sbjct: 61  FYYDIDTEAVISDESLVEIEKEMQKIVRENIPIEREVVSREEAIKRFKAIGDQYKLELIE 120

Query: 164 SIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
           +IP  E VT+Y QGE+FDLCRG HV STG+++ F KL+ VAGAYWRGDSN  ML RIYGT
Sbjct: 121 AIPEDETVTIYTQGEFFDLCRGVHVPSTGKIQVF-KLLSVAGAYWRGDSNNKMLQRIYGT 179

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISY 282
           A+  +  L +++   +E+++RDHRKL +E+DLF  + +   G+  W  KG  I + +  Y
Sbjct: 180 AFFDKNGLKEFIQMQKEAKERDHRKLGKELDLFTNSVEVGQGLPLWLPKGATIRRVIERY 239

Query: 283 MRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           +  K +   Y  + TP + +  L++ SGHWD Y   MF  
Sbjct: 240 IVDKEERLGYNHVYTPIMANVELYKTSGHWDHYDDGMFPT 279


>gi|261349933|ref|ZP_05975350.1| threonine--tRNA ligase [Methanobrevibacter smithii DSM 2374]
 gi|288860716|gb|EFC93014.1| threonine--tRNA ligase [Methanobrevibacter smithii DSM 2374]
          Length = 608

 Score =  262 bits (670), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 91/414 (21%), Positives = 168/414 (40%), Gaps = 30/414 (7%)

Query: 243 KRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
           +  H KL RE +L    +    G + W  KG  +   L  Y+   + D     I TP   
Sbjct: 193 EPPHVKLMREKELCDYESASDVGNLKWFPKGRLVRDLLADYVYNLVVDQGAMPIETPIFY 252

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D      + H   +    +            +   L+   C G   V      +++ LP 
Sbjct: 253 DLDNEAINVHAAKFGERQYRTDT-------KKNLMLRFACCFGAFRVMADPFITWKNLPA 305

Query: 361 RLAEFGSV-YRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDF 418
           +L E  +  +R E  G + GL R+R FT  D H FC        E  K  ++ I    D 
Sbjct: 306 KLYELSTYSFRFEKKGEVVGLKRLRAFTMPDFHSFCADMNSTLEEFSKQTDMCIQTGVDL 365

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
                ++  +T+       + ++   + I K VL              +L     ++  K
Sbjct: 366 DVNYEIIFRATKDFYDENKEWMYSIGKKIGKPVL------------LEILPERKHYWSCK 413

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++   D +GR  +  T+Q+D     RF+  Y+    ++ +P ++H +  GSIER I  +
Sbjct: 414 IDFAAIDYLGRPIENPTVQIDVESGKRFDITYLGEDGKEHYPTILHCSPTGSIERVICSL 473

Query: 539 IE-------NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           +E            LP WLSPI+  + T+     ++A E+ + + + ++ ++ D R+E++
Sbjct: 474 LEKTAIELDEKAPMLPTWLSPIEVRIITVGEDHKDFANELYDKINAENIRVDVDDRDESV 533

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
             KIR  + + IP I + GD E       +    +     +++ + I  +  ++
Sbjct: 534 GKKIRNAATEWIPYIFVVGDNEKESGVFSVTVRETGEKVDMTVDELIKEVLDKT 587


>gi|222445506|ref|ZP_03608021.1| hypothetical protein METSMIALI_01146 [Methanobrevibacter smithii
           DSM 2375]
 gi|222435071|gb|EEE42236.1| hypothetical protein METSMIALI_01146 [Methanobrevibacter smithii
           DSM 2375]
          Length = 608

 Score =  262 bits (670), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 91/414 (21%), Positives = 168/414 (40%), Gaps = 30/414 (7%)

Query: 243 KRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
           +  H KL RE +L    +    G + W  KG  +   L  Y+   + D     I TP   
Sbjct: 193 EPPHVKLMREKELCDYESASDVGNLKWFPKGRLVRDLLADYVYNLVVDQGAMPIETPIFY 252

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D      + H   +    +            +   L+   C G   V      +++ LP 
Sbjct: 253 DLDNEAINVHAAKFGERQYRTDT-------KKNLMLRFACCFGAFRVMADPFITWKNLPA 305

Query: 361 RLAEFGSV-YRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDF 418
           +L E  +  +R E  G + GL R+R FT  D H FC        E  K  ++ I    D 
Sbjct: 306 KLYELSTYSFRFEKKGEVVGLKRLRAFTMPDFHSFCADMNSTLEEFSKQTDMCIQTGVDL 365

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
                ++  +T+       + ++   + I K VL              +L     ++  K
Sbjct: 366 DVNYEIIFRATKDFYDENKEWMYSIGKKIGKPVL------------LEILPERKHYWSCK 413

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++   D +GR  +  T+Q+D     RF+  Y+    ++ +P ++H +  GSIER I  +
Sbjct: 414 IDFAAIDYLGRPIENPTVQIDVESGKRFDITYLGEDGKEHYPTILHCSPTGSIERVICSL 473

Query: 539 IE-------NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           +E            LP WLSPI+  + T+     ++A E+ + + + ++ ++ D R+E++
Sbjct: 474 LEKTAIELDEKAPMLPTWLSPIEVRIITVGEDHKDFANELYDKINAENIRVDVDDRDESV 533

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
             KIR  + + IP I + GD E       +    +     +++ + I  +  ++
Sbjct: 534 GKKIRNAATEWIPYIFVVGDNEKESGVFSVTVRETGEKVDMTVDELIKEVLDKT 587


>gi|307354084|ref|YP_003895135.1| threonyl-tRNA synthetase [Methanoplanus petrolearius DSM 11571]
 gi|307157317|gb|ADN36697.1| threonyl-tRNA synthetase [Methanoplanus petrolearius DSM 11571]
          Length = 610

 Score =  262 bits (669), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 99/485 (20%), Positives = 179/485 (36%), Gaps = 36/485 (7%)

Query: 179 WFDLCRGPHVRSTGQV-------KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQEL 231
           +   C+G  +    +        K   K ++        +  +         +   +   
Sbjct: 121 FTLSCKGHPLSELSRTITPGEEGKTEKKTVEHNFFVLTPEGEKKDYKEYADDSPLGKLIK 180

Query: 232 TQYLYFLEESEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRRK-IKD 289
            +    +E  ++  H +L R  +L         G   W  KG  I   L  Y+    +  
Sbjct: 181 KETGMSVESGKEPLHVELMRAKELVDYEPLSDVGHHRWMPKGKIIRDLLSDYVLGLVLNY 240

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
               + TP + D      + H   +    +  K  +      R   L+   C G  ++ +
Sbjct: 241 GGMPVETPVMYDLDNHAINEHAGKFGERQYRFKSGN------RNMMLRFAACFGMFSIMH 294

Query: 350 HGLKSYRELPVRLAEFGSV-YRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
               S   LP+++ E  +  +R+E  G   GL R+R FT  D H  C       EC +  
Sbjct: 295 DMHISPNTLPMKMYELSTYSFRHEQKGECIGLKRLRAFTMPDMHSMCLDMNQTLECFEE- 353

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
            L++        E  +  +    E        W          +  I   S+  +    L
Sbjct: 354 QLMMGWQTGKDLEYPLAAVFRCTEDFYKDHEEW----------VKKIVRMSEVPVLIETL 403

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
                ++  K +    D  GR  +  T+Q+D     RF+  Y +  +E+  P +IH +  
Sbjct: 404 SDRVHYWIAKIDLAAIDGQGRPIENPTVQIDVESAERFDIKYYSVRNEEVRPPIIHCSPT 463

Query: 529 GSIERFIGIMIENFK----GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIET 584
           GSIER I  ++EN        LP+WLSP Q  +  ++S   EYA E+   +    +  + 
Sbjct: 464 GSIERVICALLENTASQEVPMLPVWLSPTQVRILPVSSKHTEYAGELCKKINGAGVRCDF 523

Query: 585 DFRNETINYKIREHSIKKIPIIIICGDKEASERS--IGIRRFGSTT---TQKVSLLDAIP 639
           D R E++  KIRE  +  +P +++ GD E       + IR          ++++  D I 
Sbjct: 524 DDREESVGKKIREAGMDWVPYVVVVGDSEIESGKLPVTIRSMSKPKAPYKEEMTAEDLIS 583

Query: 640 ILTKE 644
            + ++
Sbjct: 584 KVKED 588


>gi|116754480|ref|YP_843598.1| threonyl-tRNA synthetase [Methanosaeta thermophila PT]
 gi|121694718|sp|A0B8D4|SYT_METTP RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|116665931|gb|ABK14958.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Methanosaeta
           thermophila PT]
          Length = 619

 Score =  262 bits (668), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 99/442 (22%), Positives = 189/442 (42%), Gaps = 33/442 (7%)

Query: 219 RIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQ 277
              G     +    +            H +L R ++L         G + ++ KG  +  
Sbjct: 175 DFRGHERLEKFVRYEIEKSRAVDRIPPHVELMRRLELVDYEPGSDPGNMRYYPKGRLVKS 234

Query: 278 TLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFAL 336
            L SY+  R ++    E+ TP + D        + D + A  +A++       D +   L
Sbjct: 235 LLESYVTDRALEMGAMEVETPVMYDMDHPTLKKYLDRFPARQYAIE------ADKKHLFL 288

Query: 337 KPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV-YRNEPSGSLHGLMRVRGFTQDDAHVFC 395
           +   C G   + +    SYR LP+R+ E     +R E  G L GL R+R FT  D H FC
Sbjct: 289 RFAACFGQFLMGHDMTFSYRSLPLRMFELTRYSFRREQRGELVGLRRLRAFTMPDMHTFC 348

Query: 396 TKEQMFNE-CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDT 454
                  E   K +   IS+ +D G +    +++ R      +   +++ +  ++G++D 
Sbjct: 349 GDMSSAMEEFRKQYEASISVLRDAGLDLKDYEVAIRF-----TKDFYENNKTFIEGLVDI 403

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH 514
           +       +   +      ++  KFE+   DA+ +     T+Q+D     R++  YV++ 
Sbjct: 404 VDKP----VLIEMWDERFFYFVLKFEFNFVDALDKASALSTVQIDVENAERYDIGYVDAE 459

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIENFKG--------NLPLWLSPIQAIVTTITSSAVE 566
             +  P+++H +  G+IER +  ++E             LP WLSP Q  +  +      
Sbjct: 460 GNRQRPIILHCSPSGAIERLMYALLEKQAMIAANGGLPMLPTWLSPTQVRIIPVAERHHA 519

Query: 567 YAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASER--SIGIRRF 624
            A E+A  L   +  ++ D R+ET+  KIR+   + +P + + GD+E S    ++ +R  
Sbjct: 520 RAMEVAEQL---NFRVDVDDRDETVGKKIRDAGREWVPYVAVVGDEELSTGLLTVTVRSE 576

Query: 625 GSTTTQ-KVSLLDAIPILTKES 645
            ++  + K+S+ +    L  E+
Sbjct: 577 STSNQKIKMSVEELRARLQSET 598


>gi|297527450|ref|YP_003669474.1| threonyl-tRNA synthetase [Staphylothermus hellenicus DSM 12710]
 gi|297256366|gb|ADI32575.1| threonyl-tRNA synthetase [Staphylothermus hellenicus DSM 12710]
          Length = 614

 Score =  262 bits (668), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 90/489 (18%), Positives = 180/489 (36%), Gaps = 39/489 (7%)

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGD----SNRPMLSRIYGTAWNTQQELTQ 233
           E+   C G  +    +  +  +  +V     + +    +    +       ++   +L  
Sbjct: 120 EFMLDCYGHPLSELSKTIRITEGGEVVRRELKKEFYILTPDGKVYDPEKFDYDKYPDLKI 179

Query: 234 YLYFLEESEKRD-----HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK 288
            +      ++            R+           G + +      I  +++ Y    ++
Sbjct: 180 LVDKEVFGKELPGGVNRVNDYCRKFGFEWEPMSDHGHMRYGPHAVVIMDSIMQYSWNVVR 239

Query: 289 DDYE---EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
                   +    + +        H   +   ++ +K       D   F L+   C    
Sbjct: 240 SLGIPVYRVMGTNMFNLSEKPVLEHALLFGDRLYELKV------DNEKFVLRYAACHQQF 293

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
           A+    + SY+ LP  + E    YR E  G L+   R+R F   D H+     ++     
Sbjct: 294 AMLRDWIISYKNLPFGMFEVADSYRLEQRGELNLCFRLRKFYMPDLHILNKDLDEAIKMS 353

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
             + + I+      G + + +   T        D            VL          + 
Sbjct: 354 RIVQDKILEEIAKIGRKYVALYNVTSDFFEKHRD------------VLIEFVRRENYPVL 401

Query: 465 TGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIH 524
             V+     ++    EY + D + R  +  T Q+D     RFN  Y +   EK HPV+IH
Sbjct: 402 VSVIPSGIYYWVLNVEYHIIDNLNRPREIATFQIDIGNGKRFNITYTDEKGEKHHPVIIH 461

Query: 525 RAVFGSIERFIGIMI--------ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLK 576
            A+ G IERFI  +         E     +P WL+P+Q  +  I +  ++YA+++A  ++
Sbjct: 462 TAIIGGIERFIYTIFDTAALMEREGKTPYIPTWLAPVQVRIIPIKNKYLDYAEKVAEKIE 521

Query: 577 SHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
           +    ++ D R E++  KIR+   + IP I++ G++E    +I +R   +   + +   +
Sbjct: 522 NAGFRVDIDDRGESLGKKIRDAGREWIPYIVVIGEREVKSNTINVRIRRTNDQKVMVTDE 581

Query: 637 AIPILTKES 645
            I IL +E+
Sbjct: 582 LIRILEEET 590


>gi|147835150|emb|CAN65675.1| hypothetical protein VITISV_002010 [Vitis vinifera]
          Length = 342

 Score =  262 bits (668), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 145/318 (45%), Positives = 202/318 (63%), Gaps = 15/318 (4%)

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GP V  T   +K  +L  VAGAYWRGD  + ML RIYGTAW  +++L  YL+F EE+++R
Sbjct: 38  GPQV--TLCNRKAVELESVAGAYWRGDEKKQMLQRIYGTAWENEEQLKAYLHFKEEAKRR 95

Query: 245 DHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQ 302
           DHR+L  ++DLF I ++ G G++FWH KG  +   +    ++  I+  Y+ + TP V   
Sbjct: 96  DHRRLGIDLDLFSIQDEAGGGLVFWHPKGAIVRHIIEDSWKKIHIEHGYDLLYTPHVARA 155

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+ SGH D YR NM++    +D +     + L+PMNCP H+ ++   L SYR+ P+R+
Sbjct: 156 DLWKTSGHLDFYRENMYSQITIEDEL-----YQLRPMNCPYHILIYKRKLHSYRDFPIRV 210

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           AE G+VYR E SGSLHGL RVRGFTQDDAH+FC ++Q+ +E   + +LI  I   FGF K
Sbjct: 211 AELGTVYRYELSGSLHGLFRVRGFTQDDAHIFCLEDQIKDEIRGVLDLIEEILLQFGFSK 270

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V LSTRPEK VG+D +W+ A + ++  LD    S        +  G GAFYGPK +  
Sbjct: 271 YEVNLSTRPEKAVGADDIWEKATSALRDALDDKGWS------YRIDEGGGAFYGPKIDLK 324

Query: 483 LKDAIGRDWQCGTIQVDF 500
           ++DA+GR WQC TIQ  +
Sbjct: 325 IEDALGRKWQCSTIQASY 342


>gi|307595064|ref|YP_003901381.1| Threonyl-tRNA synthetase editing domain-containing protein
           [Vulcanisaeta distributa DSM 14429]
 gi|307550265|gb|ADN50330.1| Threonyl-tRNA synthetase editing domain protein [Vulcanisaeta
           distributa DSM 14429]
          Length = 621

 Score =  261 bits (667), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 85/428 (19%), Positives = 169/428 (39%), Gaps = 31/428 (7%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           E       LE  ++  +    R+           G + +      + + +  Y  R   +
Sbjct: 188 EKEVLKRELEGGKEPRYIDYCRKFGFEWEPMSDVGHMRYGPAATLMMELVEDYAWRLANE 247

Query: 290 DYEEI---NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA 346
               +       +  +       H   +   M+ ++       D     ++   C    A
Sbjct: 248 LGIPVFKIRGTNMFRRGERAIDEHARLFNERMYTIE------GDKDELIMRYAACFQQFA 301

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECL 405
           +    + SYR++P+ + E    YR E  G      R+R F   D H+F    +      L
Sbjct: 302 MIRDWVLSYRDIPIGMLEVADSYRYEQPGETVLCFRLRRFYMPDLHIFTRDLKNAMEVAL 361

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
           K+H +I    +  G + + +   T+       D L + A+   K +L             
Sbjct: 362 KLHEVIFREIRKLGRDYVSLYNVTKQFYDEHRDYLIELAKREGKPIL------------V 409

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
            V+  +  ++    E+ + D + R  +  T Q D     RF   Y + + E  +PV+IH 
Sbjct: 410 RVMPEQKYYWVLNVEFHIVDELRRPREIATFQFDVGNAQRFGIKYRDENGEVKYPVIIHT 469

Query: 526 AVFGSIERFIGIMIENFK--------GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKS 577
           A+ GS+ER+I  +++             LP W+SP+Q  V  I+   + +A +IA+ L+ 
Sbjct: 470 AIIGSVERYIYALLDTAAIAESRGEVPRLPTWVSPVQVRVIPISKEHLAFANDIASKLED 529

Query: 578 HHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
             + ++ D R +ET+  ++R+     +P I++ GD+E     + +R  G+     + + +
Sbjct: 530 RMIRVDIDDRFDETLAKRVRDAETFWVPYIVVVGDREVKTGKLSVRVRGTQKPIDMGVDE 589

Query: 637 AIPILTKE 644
            I  + +E
Sbjct: 590 LISRVEEE 597


>gi|296242499|ref|YP_003649986.1| threonyl-tRNA synthetase editing domain-containing protein
           [Thermosphaera aggregans DSM 11486]
 gi|296095083|gb|ADG91034.1| Threonyl-tRNA synthetase editing domain protein [Thermosphaera
           aggregans DSM 11486]
          Length = 613

 Score =  261 bits (667), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 94/475 (19%), Positives = 181/475 (38%), Gaps = 35/475 (7%)

Query: 188 VRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD-- 245
           +  T +        +V    +   +    L       ++   EL   +       + +  
Sbjct: 133 LSKTVRKTGSVGQKRVVEKKFYIMTPDGSLHDPASFDYSNYPELKILVDKEVFGRELEGG 192

Query: 246 ---HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEI---NTPQV 299
                   R+           G + +   G  + +++  Y  +   +    +       +
Sbjct: 193 ENRVNDYCRKFGFEWEPMSDHGHMRYGPHGVVMMESVFRYSWKVANELGIPVFKVMGTNM 252

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
            +        H + +   ++      +   D   F L+   C    A+    + SY  LP
Sbjct: 253 FNLKERPVYEHAELFGDRLY------EVGLDEDRFVLRYAACHQQFAMLRDWVISYSHLP 306

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDF 418
               E    YR E  G +    R+R F   D H+F    E+       +   I+      
Sbjct: 307 FGAFEVADSYRLEQRGEVALCFRLRKFYMPDLHIFNKNLEEAVRVSRIVQEKILEEAGKL 366

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           G + + +         V SD L +      +  L          +   V+ G   ++   
Sbjct: 367 GRKYVALYN-------VTSDFLENH-----RQELLEFVRRENYPVLLAVIPGGIYYWVLN 414

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            EY + D + R  +  T Q+D     RFN  +V+   EK HPV+IH A+ G +ER+I ++
Sbjct: 415 VEYHIIDNLKRPREIATFQIDVGNGRRFNITFVDEKGEKHHPVIIHTAILGGVERYIYMI 474

Query: 539 IENFK--------GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
           ++             +P W+SP+QA +  ++   VE+A +IA  L++    ++ D R+ET
Sbjct: 475 LDTAAIAEANGQTPYIPTWISPVQARIIPVSKEYVEHALKIAVELQNQGFRVDVDDRDET 534

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           +  KIR+   + IP I++ G++E    ++ +R   S   + +SL +   IL +E+
Sbjct: 535 LGKKIRDAGREWIPYIVVVGEREVKTNTLNVRIRRSNDQKAMSLEEFARILREET 589


>gi|91773300|ref|YP_565992.1| threonyl-tRNA synthetase [Methanococcoides burtonii DSM 6242]
 gi|121684342|sp|Q12WD4|SYT_METBU RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|91712315|gb|ABE52242.1| Threonyl-tRNA synthetase [Methanococcoides burtonii DSM 6242]
          Length = 635

 Score =  261 bits (667), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 98/468 (20%), Positives = 191/468 (40%), Gaps = 36/468 (7%)

Query: 194 VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY-----LYFLEESEKRDHRK 248
           V +  K    A +YWR  +    L             L ++            +   H +
Sbjct: 159 VSEALKAEDSAKSYWRILTPDGELHDAETFDLTGHDNLQKFVDYEISKNRNIEKAPPHVE 218

Query: 249 LAREMDL-FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ 306
           L R +++  +     SG + ++ KG  +   + +++  +       E+ TP + D +   
Sbjct: 219 LMRRLEIADYEPGSDSGNMRYYPKGRLMKSLIENFVLEESSKIGAMEVETPLMYDMNHPT 278

Query: 307 QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFG 366
              + D + A  ++++       D R   L+   C G   + +    SY+ LP+++ E  
Sbjct: 279 LKKYLDRFPARQYSIE------SDKRHMFLRFAACFGQFLMNHDMTISYKNLPLKMIEMT 332

Query: 367 SV-YRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIM 424
              +R E  G L GL R+R FT  D H  C   E   ++  + +++ I I +  G +   
Sbjct: 333 RYSFRKEQRGELVGLRRLRAFTMPDMHTLCPDMEAAISQFGEQYSMCIDILRKIGIDVSD 392

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
            +++ R  +    D          +  +  +       +   +      ++  KFE+   
Sbjct: 393 FEVAIRFTREFYDD---------NREFITELAKKVDKPVLVEMWDTRFFYFVLKFEFNFV 443

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           DAI +     T+Q+D     R++  YV+++ +   P ++H +  G+IER I  ++E    
Sbjct: 444 DAIAKASALSTVQIDVENAERYDINYVDANGKINRPTILHCSPSGAIERCIYALLEKAAM 503

Query: 545 --------NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                   NLP+WLSP Q  V  I    +++AQE+A+ L       + D R ET+  KIR
Sbjct: 504 DAEEGKVPNLPVWLSPTQVRVIPIAERHMDFAQEVADSLL---CRADIDDREETVGKKIR 560

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTT-TQKVSLLDAIPILTK 643
           +   + IP + + GD E     + +     +   + + +      L++
Sbjct: 561 DAGREWIPYVAVIGDSEVESGKVTVTIRAESEPKKPMKVEMTAEELSE 608


>gi|288561385|ref|YP_003424871.1| threonyl-tRNA synthetase ThrS [Methanobrevibacter ruminantium M1]
 gi|288544095|gb|ADC47979.1| threonyl-tRNA synthetase ThrS [Methanobrevibacter ruminantium M1]
          Length = 608

 Score =  261 bits (666), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 89/416 (21%), Positives = 168/416 (40%), Gaps = 29/416 (6%)

Query: 243 KRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
           +  H K+ RE +L         G + W+ KG  +   L  Y+   + D     I TP   
Sbjct: 194 EPPHVKIMREKELCDYEIASDIGNLKWYPKGRLVRDLLADYVYNFVVDLGAMPIETPIFY 253

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D        H   +    +            +   L+   C G   V      +++ LP 
Sbjct: 254 DLANDAIREHAAKFGERQY-------KTATKKDLMLRFACCFGAFRVLGDSFLTWKNLPA 306

Query: 361 RLAEFGSV-YRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           ++ E  +  +R E  G + GL R+R FT  D H FC       + L+  +  + +    G
Sbjct: 307 KVYELSTYSFRFEKRGEVVGLKRLRAFTMPDMHSFCAD---MPQALEEFDAQVDMCVQTG 363

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
            +  +   +        ++  +++ +  M+     I       +   +L     ++  K 
Sbjct: 364 VDLDVNYEAI----FRATEDFYEENKEWMEATAKRIGKP----LLLEILPERKHYWSCKI 415

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           ++   D +GR  +  T+Q+D     RF   Y++      +P+++H +  GS+ER I  ++
Sbjct: 416 DFAAIDYLGRPIENPTVQIDVESGKRFGIEYIDEEENPQNPIILHCSPTGSVERVICSLL 475

Query: 540 ENFK------GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           EN          LP WLSP Q  +  I    +EYA ++A+ + + ++ ++ D  ++ +  
Sbjct: 476 ENTAKEDGKAPMLPTWLSPSQVRILPIGEKHLEYANQLADKIAAENIRVDLDNSDDRVGK 535

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK--ESLP 647
           KIR  S + +P II+ GDKE       +    S     ++  + I  +    E +P
Sbjct: 536 KIRSASKEWVPYIIVIGDKEVENDVYSVTVRESGEKVDMTAEELIAEVKAKTEGMP 591


>gi|126465876|ref|YP_001040985.1| threonyl-tRNA synthetase [Staphylothermus marinus F1]
 gi|166225505|sp|A3DN67|SYT_STAMF RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|126014699|gb|ABN70077.1| threonyl-tRNA synthetase [Staphylothermus marinus F1]
          Length = 614

 Score =  260 bits (665), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 90/488 (18%), Positives = 184/488 (37%), Gaps = 37/488 (7%)

Query: 178 EWFDLCRGPHVRSTGQVKKFF----KLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQ 233
           E+   C G  +    +  +       + +     +   +    +       ++   +L  
Sbjct: 120 EFMLDCYGHPLSELSKTIRITGGGEVVRRELKKEFYILTPDGKVYDPEKFNYDKYPDLKI 179

Query: 234 YLYFLEESEKRD-----HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK 288
            +      ++            R+           G + +      I ++++ Y    ++
Sbjct: 180 LVDKEVFGKELPGGVNRVNDYCRKFGFEWEPMSDHGHMRYGPHAVIIMESIMQYSWNIVR 239

Query: 289 DDYEEIN---TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
                +       + +        H   +   ++ +K       D   F L+   C    
Sbjct: 240 SLGIPVYKVMGTNMFNLSEKPVLEHALLFGDRLYELKV------DNEKFVLRYAACHQQF 293

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           A+    + SY+ LP  + E    YR E  G L+   R+R F   D H+         +  
Sbjct: 294 AMLRDWIISYKNLPFGMFEVADSYRLEQRGELNLCFRLRKFYMPDLHILNRDLNEAIKIS 353

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
           +I             +KI+ +++    K V    +  D  +  + +L          +  
Sbjct: 354 RIV-----------QDKILEEIAKIGRKYVALYNVTSDFFDKYRDILIEFVRRENYPVLV 402

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
            V+     ++    EY + D + R  +  T Q+D     RFN  Y +   EK HPV+IH 
Sbjct: 403 SVIPSGIYYWVLNVEYHIIDNLNRPREIATFQIDIGNGERFNITYTDEKGEKHHPVIIHT 462

Query: 526 AVFGSIERFI------GIMIENFK--GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKS 577
           A+ G IERFI        ++E       +P WL+P+Q  +  I +  ++YA+++A  +++
Sbjct: 463 AIIGGIERFIYTIFDTAALMEKEGKTPYIPTWLAPVQVRIIPIKNEYLDYAEKVAEKIEN 522

Query: 578 HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
               ++ D R E++  KIR+   + IP I++ G++E    +I +R   +   + +   + 
Sbjct: 523 AGFRVDIDDRGESLGKKIRDAGREWIPYIVVIGEREVRSNTINVRIRRTNDQKVMVTDEL 582

Query: 638 IPILTKES 645
           I IL +E+
Sbjct: 583 IRILEEET 590


>gi|302518216|ref|ZP_07270558.1| LOW QUALITY PROTEIN: threonyl-tRNA synthetase [Streptomyces sp.
           SPB78]
 gi|302427111|gb|EFK98926.1| LOW QUALITY PROTEIN: threonyl-tRNA synthetase [Streptomyces sp.
           SPB78]
          Length = 448

 Score =  260 bits (664), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 113/366 (30%), Positives = 173/366 (47%), Gaps = 19/366 (5%)

Query: 242 EKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQV 299
              DH +L R + L+        G+ +    G  +   L  Y+R  ++ D Y+ +++P +
Sbjct: 8   RDHDHHRLGRALGLYGTDPLLGAGLPYLLPDGASVRHALEEYVRGLEVADGYQHVHSPVL 67

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             Q L+ +SGHW  YRA+MF              F L+P  CP H  ++    +SYRELP
Sbjct: 68  GKQELYVRSGHWAHYRADMFPPMEVG-----GEHFVLRPSLCPHHALIYRAQARSYRELP 122

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+AE G ++R EPSG+L GL RVR    +DAH+FC  E +  E      LI + Y+  G
Sbjct: 123 LRIAELGGMFRAEPSGTLGGLTRVRAIHLNDAHLFCAPESLAGEVAGALALIRTAYRALG 182

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAEN-IMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
                 +LS       G DA +  AE    +      +  +   ++     GE AFYGPK
Sbjct: 183 LAPSRYRLSLP-----GEDAKYALAEGVWERSAAALAEALAGAGLDWEEERGEAAFYGPK 237

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +   +DA GR++   T+Q DF+ P+ F   Y  +   +  PVM+HR+V GS+ER +  +
Sbjct: 238 IDVQARDAAGREFTLSTVQADFHQPAAFGLDYRAADGSRPRPVMVHRSVLGSLERVLARL 297

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLS-IET-----DFRNETIN 592
           IE   G  P WL+P+Q  V  +     E A+      ++  L   +      D R     
Sbjct: 298 IEVHGGAFPAWLAPVQVGVVPVGEEQEEAAESFVRRCRAAGLRGADVPGARGDPRGARPA 357

Query: 593 YKIREH 598
             +R  
Sbjct: 358 GALRAA 363


>gi|320101395|ref|YP_004176987.1| threonyl-tRNA synthetase [Desulfurococcus mucosus DSM 2162]
 gi|319753747|gb|ADV65505.1| threonyl-tRNA synthetase [Desulfurococcus mucosus DSM 2162]
          Length = 611

 Score =  260 bits (663), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 91/485 (18%), Positives = 183/485 (37%), Gaps = 37/485 (7%)

Query: 179 WFDLCRGPHVRSTGQV--KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           +   C G  +    +   +      +V    +   +   +L    G  +    EL   + 
Sbjct: 120 FTLECYGHPLSELSRSVRRSETGARRVVEKKFYIMTPDGVLHDPAGFNYAGYPELKALVE 179

Query: 237 FLEESEKR-----DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDY 291
                ++         +  R+           G + +      I ++++ Y     +   
Sbjct: 180 KEVFGKEFTGGENKVNEYCRKFGFEWEPMSDHGHMRYGPHAVSIMESVMRYSWMVAQSLG 239

Query: 292 EEI---NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
             +       + +        H   +   ++ V+       D   F L+   C    A+ 
Sbjct: 240 IPVFKVMGSNMFNLKEKPVYEHAVLFGDRLYEVQL------DEDRFVLRYAACHQQFAML 293

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKI 407
              + SY+E+P    E    YR E  G L    R+R F   D H+      +     +++
Sbjct: 294 RDWVISYKEMPFGAFEVADSYRLEQRGELALCFRLRKFYMPDLHILTRDINEAIEVSMRV 353

Query: 408 HNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGV 467
            + I       G   + +           +D   +   + +           +  +   V
Sbjct: 354 QSKIHEEAGKVGRSYVALYNI--------TDEFLEKYRDKLVE----FVKREKYPVLLAV 401

Query: 468 LLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAV 527
           +     ++    EY + D + R  +  T Q+D    +RFN  YV+   EK HPV+IH A+
Sbjct: 402 IPSGIYYWVLNVEYHIVDNLNRPREIATFQIDVGNGARFNITYVDEKGEKHHPVIIHTAI 461

Query: 528 FGSIERFIGIMIENFK--------GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH 579
            G +ER+I ++++             +P W+SP+QA V  ++    E+A ++A  L S  
Sbjct: 462 LGGVERYIYMVLDTAALMEAKGQTPYIPTWMSPVQARVIPVSREFNEHAFKVAGELASRG 521

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
             ++ D R+ET+  KIR+   + +P II+ G++E +  ++ +R   S   + + L + I 
Sbjct: 522 FRVDVDDRDETLGKKIRDAGREWVPYIIVIGEREVATGTLNVRVRRSNDQKVMRLEEFID 581

Query: 640 ILTKE 644
           +L +E
Sbjct: 582 LLNRE 586


>gi|254167669|ref|ZP_04874520.1| threonyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|289596979|ref|YP_003483675.1| threonyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|197623478|gb|EDY36042.1| threonyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|289534766|gb|ADD09113.1| threonyl-tRNA synthetase [Aciduliprofundum boonei T469]
          Length = 612

 Score =  259 bits (662), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 102/523 (19%), Positives = 212/523 (40%), Gaps = 46/523 (8%)

Query: 153 KKEAYKV-----EILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQV--------KKFFK 199
             EA KV     ++L                +   C+G  +    +         +    
Sbjct: 85  PGEAMKVLKELEKMLSEKYEVHRAPFGWYKSFVISCKGHPLSELSKEIRGEAKEEESEAL 144

Query: 200 LMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF-----LEESEKRDHRKLAREMD 254
             +    YW        L  +    +++   L +++ +         E   H KL R ++
Sbjct: 145 KAEKRTTYWYIMDLNGELYDVDDFDYSSYPNLKKFVDYEISGTRAAKEIPPHVKLMRSLE 204

Query: 255 L-FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWD 312
           L  +     SG + ++ KG  I   +  Y+  K+ D    ++ TP + D +      + +
Sbjct: 205 LADYEPGSDSGNMRYYPKGKLIKALIEDYVENKVIDYGAMQVETPIMYDFNHPSLKSYLN 264

Query: 313 SYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV-YRN 371
            + A  + V    D       + L+   C G   + +    SYR LP+RL E     +R 
Sbjct: 265 RFPARQYIVLSGKDK------YFLRFAACFGQFLMMHDATISYRNLPLRLYEMAKYAFRR 318

Query: 372 EPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE-CLKIHNLIISIYKDFGFEKIMVKLSTR 430
           E  G L GL R+R FT  D H          E   + + + I + KDFG E    +++ R
Sbjct: 319 EQKGELSGLRRLRAFTMPDMHTLAADMPQAMEEFKRQYEMAIEVLKDFGLELGDYEVAIR 378

Query: 431 PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRD 490
             +       +++ ++ ++ ++  +       +   +      ++  KFE+   D++ + 
Sbjct: 379 FTR-----DFYEENKDFIRELVKLVNRP----VLIQMWDERFFYFVLKFEFNFVDSLNKA 429

Query: 491 WQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE--------NF 542
               T+Q+D     R+   Y + +  + +P ++H +  G++ER +  M+E          
Sbjct: 430 AALSTVQIDVENAERYGITYYDENGNERYPYILHCSPSGAVERILYAMLEKADMDAKMGK 489

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
           K  LP+WLSP Q  +  +    +  + +  +  +S    ++ D R+ +++ KIR+   + 
Sbjct: 490 KPKLPVWLSPTQVRIIPVKDDFIGCSIQEMDYFRSEEFRVDIDDRDLSVSRKIRDAEKEW 549

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           IP I++ G+KE  +  + +R  G    +++   + + +L K++
Sbjct: 550 IPYIVVIGEKEKEKDILTVRIRGGG-VKEMKREELLALLKKDT 591


>gi|226330398|ref|ZP_03805916.1| hypothetical protein PROPEN_04316 [Proteus penneri ATCC 35198]
 gi|225201193|gb|EEG83547.1| hypothetical protein PROPEN_04316 [Proteus penneri ATCC 35198]
          Length = 238

 Score =  259 bits (662), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 97/227 (42%), Positives = 138/227 (60%), Gaps = 6/227 (2%)

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
              +KI+VKLSTRPEKR+G DALWD AE  +   L      + + I      GEGAFYGP
Sbjct: 7   LDLKKIVVKLSTRPEKRIGEDALWDIAEADLAKAL------TDNNIEFEYQPGEGAFYGP 60

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K E+ L D + R WQCGT+Q+DF+LP R  A YV  ++E+  PVM+HRAV GS+ERFIGI
Sbjct: 61  KIEFTLYDCLDRAWQCGTVQLDFSLPGRLGASYVAENNERKVPVMLHRAVLGSLERFIGI 120

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + E + G  P WL+P Q +V  IT    +Y Q++   L+   +  + D RNE I +KIRE
Sbjct: 121 LTEEYAGFFPTWLAPQQVVVMNITDGQADYVQKLVKELQDAGIRAKADLRNEKIGFKIRE 180

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           H+++++P +++CGDKE     + +R         + + +    L +E
Sbjct: 181 HTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSIDVNEFKEKLLQE 227


>gi|312137209|ref|YP_004004546.1| ser-tRNA(thr) hydrolase ;threonyl-tRNA synthetase [Methanothermus
           fervidus DSM 2088]
 gi|311224928|gb|ADP77784.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Methanothermus
           fervidus DSM 2088]
          Length = 608

 Score =  259 bits (661), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 114/522 (21%), Positives = 208/522 (39%), Gaps = 45/522 (8%)

Query: 142 SHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFF--- 198
           S + A ++ +S +   K E L+       V       +   C+G  +    +  K     
Sbjct: 89  SPDAAVDILKSLESKLKSEGLKV----SRVPFGWYKSFEISCKGHPLSELSRNIKVKTKK 144

Query: 199 -KLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL----EESEKRDHRKLAREM 253
            K   +   ++  D     L  I    +   +      + L       ++  H KL RE 
Sbjct: 145 IKEESIESEWFIMD--NEELIEIDNYEFKDFEFKDVVYHELGIVKPSEKEPPHIKLMREK 202

Query: 254 DLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHW 311
            +         G + W+ KG  I   L  Y+   + K     + TP + D        H 
Sbjct: 203 KIADYEPSADIGHLRWYPKGKLIRDLLSDYVYSLVTKYGAMVVETPIMYDLSDKAIRVHA 262

Query: 312 DSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV-YR 370
           + +    + +        + +   L+   C G   +       +++LPV++ E  +  +R
Sbjct: 263 EKFGERQYRI-------HNKKELMLRYACCFGAFKILADSFLRWKDLPVKIYELSTYSFR 315

Query: 371 NEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
            E  G + GL R+R FT  D H  C   +Q   E  K   + +   +D        KL+ 
Sbjct: 316 LEQRGEVVGLKRLRSFTMPDLHTVCRDMQQALEEFEKQVEMCLKAAEDL-------KLNH 368

Query: 430 RPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGR 489
           +   R   D   ++ E I      ++     + I   +L     ++  K ++   D++GR
Sbjct: 369 KAIFRFTKDFYEENKEWI-----KSLSRKINEPILIELLPKRKHYWVAKIDFAAVDSLGR 423

Query: 490 DWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK------ 543
             +  T+Q+D     RFN  Y++   +   PV++H +  GSIER I  ++E         
Sbjct: 424 PIENSTVQIDVESGKRFNISYLDEDGKNKFPVILHCSPTGSIERVICSLLEENAKKINNN 483

Query: 544 --GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
               LP+WLSPI   V  ++   V+YA +I   + S+ +  + D  NET++ K+R    +
Sbjct: 484 KLPMLPVWLSPIHVRVIPVSEKHVDYAIDIVKKINSYGIRADIDDTNETVSKKVRNAGKE 543

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            IP + + GDKE SE  + +    +   +++ L + I I+  
Sbjct: 544 WIPYVAVIGDKEISEDELTVTIRENDEKRELKLEELIEIVKN 585


>gi|297620157|ref|YP_003708262.1| threonyl-tRNA synthetase [Methanococcus voltae A3]
 gi|297379134|gb|ADI37289.1| threonyl-tRNA synthetase [Methanococcus voltae A3]
          Length = 629

 Score =  258 bits (660), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 103/548 (18%), Positives = 210/548 (38%), Gaps = 43/548 (7%)

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
           S D   +I K ++E++A +   L+      KA ++    K     E+   I A+ N    
Sbjct: 87  SPDVAKKILKDVEELLAPNYNVLRSPFGWYKAFKIS--CKGHPLSELSRQISAERNEEAE 144

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
            + +              +     ++ + +      D  + +L    G      +     
Sbjct: 145 DKEKSKTTFYLVD-----KDFNLIEMNEESVKTVEDDGLKALLKHELGIK----EHKEDK 195

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGSGVIF-WHRKGWKIFQTLISYMRRKI-KDDYE 292
               +   +  H K  +E ++           F W+ KG  I   L  Y+   + K    
Sbjct: 196 KSKKKSESEPPHVKYIKEKEICDYEPSSDAGHFRWYPKGKLIRDLLSDYVYDLVVKYGAM 255

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
            + TP + D        H D +    +  + ++      +   L+   C G   +     
Sbjct: 256 PVETPVMYDLGNKAIKEHADKFGERQYRFRQSN------KDLMLRFAACFGQFMMKKDMY 309

Query: 353 KSYRELPVRLAEFGSV-YRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNL 410
              + LP++L E  +  +R E  G L GL R+R FT  D H  C   EQ      +   +
Sbjct: 310 LLPKHLPLKLYELSTYSFRYEQRGELVGLKRLRAFTMPDMHTVCMDMEQAKQAFEEQFWM 369

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
            +    D      ++           +   +D+ ++ +  ++   +   +  +   +L  
Sbjct: 370 GLQTGDDLKTPYSIIFRF--------TQDFYDEHKDWLYNIITEYRAKYEKDVVLEILPA 421

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
              ++  K +  + D+ GR  +  T+Q+D     RF+    +   +K +P+++H +  GS
Sbjct: 422 RKHYWIGKVDMAVVDSFGRPIENPTVQIDVESAKRFDITVNDGD-KKINPIILHCSPTGS 480

Query: 531 IERFIGIMIENFK--------GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSI 582
           +ER +  ++E             LP WL+PIQ  V  ++    EYA  +A  L+++ +  
Sbjct: 481 VERVLCGLLEGAYLNTLEEVPPMLPTWLAPIQVRVIPVSDKHQEYALSVAEKLRANGIRA 540

Query: 583 ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK-----VSLLDA 637
           + D R E+I  KIR         +++ GD+E  + ++ +     ++T+K     + L + 
Sbjct: 541 DYDDREESIGKKIRNAGKDWSMYVVVIGDEEMEKGNLNVTVRAKSSTKKPVKEVMKLEEL 600

Query: 638 IPILTKES 645
           I  +  E+
Sbjct: 601 ISTIKSET 608


>gi|229030088|ref|ZP_04186151.1| Threonyl-tRNA synthetase [Bacillus cereus AH1271]
 gi|228731210|gb|EEL82129.1| Threonyl-tRNA synthetase [Bacillus cereus AH1271]
          Length = 236

 Score =  257 bits (657), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 93/238 (39%), Positives = 149/238 (62%), Gaps = 8/238 (3%)

Query: 408 HNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGV 467
              I  +YK FGFE   V+LSTRPE  +G D LW+ AE  ++ VL ++           +
Sbjct: 1   MAQIDYVYKTFGFEYE-VELSTRPEDSMGDDKLWEQAEASLENVLHSLDY------KYRL 53

Query: 468 LLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAV 527
             G+GAFYGPK ++ +KDA+ R  QCGTIQ+DF +P +F+  Y++  +EK  PV+IHRAV
Sbjct: 54  NEGDGAFYGPKIDFHIKDALNRSHQCGTIQLDFQMPEKFDLNYIDEKNEKRRPVVIHRAV 113

Query: 528 FGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDF 586
            GS++RF+ I+IE+F G  P W++P+Q  V  ++++  V+YA+ +A  L    + +E D 
Sbjct: 114 LGSLDRFLAILIEHFGGVFPAWVAPVQVKVIPVSNAVHVQYAEAVAEKLAQAGVRVERDM 173

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R E + YKIRE  ++K+P +++ GDKE    ++ +R++G   ++ V L   +  + +E
Sbjct: 174 REEKLGYKIREAQMQKVPYVLVIGDKEMENGAVNVRKYGEEKSEVVELNGFVESMKEE 231


>gi|20093982|ref|NP_613829.1| threonyl-tRNA synthetase [Methanopyrus kandleri AV19]
 gi|22654113|sp|Q8TXW5|SYT_METKA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|19886944|gb|AAM01759.1| Threonyl-tRNA synthetase [Methanopyrus kandleri AV19]
          Length = 624

 Score =  257 bits (657), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 101/419 (24%), Positives = 181/419 (43%), Gaps = 24/419 (5%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLF-HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK 288
                       E+  H KL RE ++  H      G + W+ KG  + + L  Y+   + 
Sbjct: 182 MHELGEERETGDEEPAHVKLMREKEICDHEPAADVGHVRWYPKGHVVRRCLAEYVENLMA 241

Query: 289 D-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
           D     + TP + D        H D +    + ++  +      R   L+   C G   +
Sbjct: 242 DLGAAVVETPVMYDLSEDAIREHADKFGERQYRIRAGN------RALMLRYAACFGAFRL 295

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLK 406
                 S R LP+++ E    +R E SG + GL R+R FT  D H  C   ++   E L+
Sbjct: 296 LADTTLSRRHLPLKIYELSQSFRLEQSGEVVGLKRLRAFTMPDLHTVCADMDEAVEEFLE 355

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
              L + +  D G E  +V  +T    +   + L + AE + K   D         +   
Sbjct: 356 QAKLCLEVGLDLGLEYEVVFRTTEKFLKERKEVLEELAEAMEKAYGDA------KPVLVE 409

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
           VL     ++  K ++   D++GR  +  T+Q+D     RF   Y +   ++ HPV++H +
Sbjct: 410 VLPERKHYWECKVDFAFIDSLGRPIENPTVQIDVESGRRFGITYADESGDERHPVILHCS 469

Query: 527 VFGSIERFIGIMIENFK---------GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKS 577
             GS+ER I  ++E              LP WLSP+QA V  ++   +E A+++   LKS
Sbjct: 470 PTGSLERVICAILEGQYKRFEQEGKLPTLPTWLSPVQARVIPVSEKVLEEAEKVFEELKS 529

Query: 578 HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
               ++ D R+E +  KIR+   + +P +I+ G++E  + ++ +     +T ++    +
Sbjct: 530 EGFRVDLDDRDEPVGRKIRDAGEEWVPYVIVIGEEEVKKGTLSVTIREESTLKEQRREE 588


>gi|89100404|ref|ZP_01173268.1| threonyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
 gi|89084923|gb|EAR64060.1| threonyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
          Length = 234

 Score =  257 bits (656), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 111/235 (47%), Positives = 162/235 (68%), Gaps = 2/235 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           M   IKLTFPDG++K FP   +  DVA SIS  L KKA+A  +NG + DL  P+  +GSI
Sbjct: 1   MSELIKLTFPDGAVKEFPKGTSTEDVAASISPGLKKKALAGKLNGIMYDLRRPIEEDGSI 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EI+T     +L V+RHS AH+MA+A++ +    +  +GP+IE GFYYD D E+  + ++L
Sbjct: 61  EIVTQGSDEALEVLRHSTAHLMAQAIKRLHKGAKFGVGPVIEGGFYYDVDLEESLTPEDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IEK+M +I+  +    ++ +S E+A E F+   + YK+E++E+IP  E VTLY QG++
Sbjct: 121 PLIEKEMAKIVNENIDVHRKAVSREEAVEFFKEIGDEYKLELIEAIPEGETVTLYEQGDF 180

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
            DLCRG HV STG++K+F KL+ +AGAYWRGDS+  ML RIYGTA+  +++L ++
Sbjct: 181 TDLCRGVHVPSTGKIKEF-KLLSIAGAYWRGDSDNKMLQRIYGTAFFKKEDLAEH 234


>gi|119719664|ref|YP_920159.1| threonyl-tRNA synthetase [Thermofilum pendens Hrk 5]
 gi|166225513|sp|A1RY76|SYT_THEPD RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|119524784|gb|ABL78156.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Thermofilum
           pendens Hrk 5]
          Length = 608

 Score =  257 bits (656), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 93/422 (22%), Positives = 168/422 (39%), Gaps = 31/422 (7%)

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEI 294
                E  +  + +  R+           G + +  +   +   +  Y  +  +     +
Sbjct: 183 FKKKREGGEPKYLEYCRKFGFEWEPMSDLGHMRYGPEATIMLDAVAEYAWQCARSLGIPV 242

Query: 295 N---TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
                    +      + H   +   ++ ++       D +   L+   C    A+    
Sbjct: 243 YKVRGTNTFNLSFKPVAQHAQLFGDRLYQMEV------DEKKLILRYAACHQQFAMVKDW 296

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNL 410
             SYR+LP    E    YR E  G L    R+R F   D HVFC    +      +IH+ 
Sbjct: 297 EISYRDLPFGAFEVADSYRLEQPGELLLCFRLRKFYMPDLHVFCKDLAEAMEVSFRIHSK 356

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
           I    +  G + + +   TR       D L    E   K VL       +          
Sbjct: 357 IYEEIRKLGRDYVSIYNLTRSFLEQHRDYLKRLVEMEGKPVLLHFVPEGKY--------- 407

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
              ++    EY + D +GR  + GT Q+D     RF   YV+ ++ + +PV+IH A+ GS
Sbjct: 408 ---YWVINVEYNIIDELGRPREIGTFQIDVGNAERFGITYVDENNTRRYPVIIHTAIIGS 464

Query: 531 IERFIGIMIENFKGN--------LPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSI 582
           +ER++  +++             LPLWLSP+Q  V   +S  ++ A  IA+ L+   + +
Sbjct: 465 LERYVFAVLDTAAKKARAGEVPSLPLWLSPVQVRVIPHSSEYLKLADSIADKLEEQGIRV 524

Query: 583 ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           + D R E++  +IR+  +K IP +++ G +EA    + +R  G     ++SL + +  L 
Sbjct: 525 DVDDREESLAKRIRDAEVKWIPYVVVVGKREAESGKLTVRVRGQG-QYEMSLEELVGRLV 583

Query: 643 KE 644
            E
Sbjct: 584 SE 585


>gi|329577160|gb|EGG58630.1| TGS domain protein [Enterococcus faecalis TX1467]
          Length = 238

 Score =  256 bits (654), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 103/225 (45%), Positives = 156/225 (69%), Gaps = 5/225 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +TFPDG++K F    T  DVA+SIS SLAKKA+A   NG + DL  P+  +GS+EI+
Sbjct: 17  SIHITFPDGAVKPFDSGVTTFDVAKSISNSLAKKALAGKFNGVLIDLDRPIAEDGSLEIV 76

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
           TP+   +L ++RHS AH+MA A++ ++P ++  +GP I+ GFYYD D  E P ++++L  
Sbjct: 77  TPDHEDALGILRHSSAHLMANALRRLFPNIKFGVGPAIDSGFYYDTDNGESPVTAEDLPA 136

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE +M +I+  ++P +++ +S  +A EL     + YKVE++  +P  E +T+Y QG++ D
Sbjct: 137 IEAEMMKIVKENNPIVRKEISRAEALEL--FADDPYKVELITDLPEDEIITVYDQGDFVD 194

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWN 226
           LCRG HV STG+++ F KL+ VAGAYWRG+S+  M+ RIYGTA+ 
Sbjct: 195 LCRGVHVPSTGRIQVF-KLLSVAGAYWRGNSDNHMMQRIYGTAFF 238


>gi|242208348|ref|XP_002470025.1| predicted protein [Postia placenta Mad-698-R]
 gi|220730925|gb|EED84775.1| predicted protein [Postia placenta Mad-698-R]
          Length = 470

 Score =  255 bits (650), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 136/514 (26%), Positives = 216/514 (42%), Gaps = 73/514 (14%)

Query: 164 SIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
            +P   + T+YR G   DLC GPH+  T           V+     G +   +L RIYG 
Sbjct: 2   KVPDGSSTTVYRCGAMIDLCVGPHIPHT-----------VSIQSPHGYNVNDLLQRIYGI 50

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYM 283
            +  + +L++Y  FL E+ +R+HRK+ +E  LF   +   G  FW   G  ++ TL+  M
Sbjct: 51  LFPDKTQLSEYKEFLAEAARREHRKIGKEQKLFFFNDLSPGGYFWRPHGTHVYNTLVELM 110

Query: 284 RRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
           R +  K  Y+E+ +  +                 ++ A+       +     ALK MN P
Sbjct: 111 RSEYIKRGYQEVVSCNI-----------------DLCAL------AELQERHALKLMNFP 147

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN 402
           GH  +F+   +SY+ELP+ +AEF  V+RNE SG+L GL RV  F QDD HVFC       
Sbjct: 148 GHCLIFDSRDRSYKELPICMAEFWIVHRNEVSGTLTGLTRVCRFVQDDMHVFCMP-SQEE 206

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
           E   + + +  I        +          R G    W      M+ +  +I+ S    
Sbjct: 207 EIYNLFDFMQHIMTSSDSTSVSSC-------RRGLTTTWARLRRGMR-LRTSIEESLGQA 258

Query: 463 INTGVLLGEGAFYGP-------KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS 515
           I+  V  G                ++ ++ A   + +  +    F L  R      ++  
Sbjct: 259 ISRPVTSGRSIPATAPSTARRSTSQFAMRCAAHFNARTSSSTSSFRLKYRSADDTASADK 318

Query: 516 EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLL 575
               PV+IHRA+ GS+E FI I+ E+F      WLSP+QA+V        EYA E+A  L
Sbjct: 319 PPSRPVIIHRAILGSLEWFIAIITEHFARKWLFWLSPLQALVVPT-----EYASEVAQKL 373

Query: 576 KSHHLSIETDFRNETINYKIREHSIKKI-------------PIIIICGDKEASERSIGIR 622
               L  + D  +  +  +IR+  I +                + + G +E   RS+ IR
Sbjct: 374 SDLRLFADVDSGDNVLPIEIRDSEITQYDFTLTRIAETQCNHYMTVLGQEELGGRSVNIR 433

Query: 623 RFGSTTTQK----VSLLDAIPILTKESLPPDCQK 652
                +T+     + L + +  L         +K
Sbjct: 434 DRDDISTKAKGHMIPLEEVVQKLIALKNSRSLKK 467


>gi|332967807|gb|EGK06908.1| threonine--tRNA ligase [Desmospora sp. 8437]
          Length = 295

 Score =  254 bits (649), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 106/306 (34%), Positives = 180/306 (58%), Gaps = 17/306 (5%)

Query: 248 KLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLW 305
           KL +E+ +F ++++   G+  W   G  I + +  Y+  K +   Y+ + TP +    L+
Sbjct: 1   KLGKELKIFTLSQEVGQGLPLWLPNGATIRRIIERYIIDKEERLGYQHVYTPHLASVELY 60

Query: 306 QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEF 365
           + SGHWD Y  +M+     D+         L+PMNCP H+ ++ + LKSYR LPVR+AE 
Sbjct: 61  KISGHWDHYHEDMYPPMKMDN-----EELVLRPMNCPHHMMIYKNDLKSYRNLPVRIAEL 115

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
           G ++R+E SG+L GL RVR  T +DAH+FC  +Q+ +E +++  LI  +Y+DFG +    
Sbjct: 116 GMMHRHEMSGALSGLQRVRAMTLNDAHIFCRPDQIKSEFIRVVQLIEEVYRDFGIKDFWY 175

Query: 426 KLSTRPE----KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
           +LS R      K V +D +W+ ++ +++  +D +       ++     GE AFYGPK + 
Sbjct: 176 RLSYRDPEDKKKYVQNDEMWETSQRMLREAMDEMG------VDYVEAEGEAAFYGPKLDV 229

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            ++ A+G+D    T+Q+DF+LP++F   Y+    +   PV+IHR + G++ERF+  ++E 
Sbjct: 230 QVQTALGKDETLSTVQMDFHLPNQFGLEYIGEDGQPHRPVVIHRGIVGTMERFVAFLLEY 289

Query: 542 FKGNLP 547
           +KG LP
Sbjct: 290 YKGVLP 295


>gi|219851928|ref|YP_002466360.1| threonyl-tRNA synthetase [Methanosphaerula palustris E1-9c]
 gi|254783527|sp|B8GHN2|SYT_METPE RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|219546187|gb|ACL16637.1| threonyl-tRNA synthetase [Methanosphaerula palustris E1-9c]
          Length = 609

 Score =  254 bits (648), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 92/410 (22%), Positives = 165/410 (40%), Gaps = 32/410 (7%)

Query: 246 HRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQH 303
           H  L R  +L         G + W  +G  +   L  Y+    ++     + TP + D  
Sbjct: 195 HVDLMRSKELVDYEPASDVGNLRWLPRGKIVRDLLADYVLHMVLEYGGSPVETPVMYDLG 254

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
                 H D +    +  K  +      R   L+   C G  ++      S   LP+++ 
Sbjct: 255 DKAIYEHADKFGERQYRFKSGN------RNMMLRFAACFGMFSIMRDMHISPNTLPIKMY 308

Query: 364 EFGSV-YRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFE 421
           E  +  +R+E  G + GL R+R FT  D H  C   E   +   +   L     +DF  E
Sbjct: 309 ELSTYSFRHEQRGEVIGLKRLRAFTMPDMHSLCLDMEGALHCFEEQLRLGWKSGEDFETE 368

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            + V   TR          ++  EN +K ++   +      +   +L     ++  K + 
Sbjct: 369 LVGVFRCTRG--------FYEKYENWVKSIVAESRVP----MLIEILSDRVHYWIAKVDL 416

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
              D  GR  +  T+Q+D    +RF+  Y +   E  HP ++H +  GSIER I  ++EN
Sbjct: 417 AAIDGQGRPIENPTVQIDVESSTRFDIKY-HLDGEVVHPPILHCSPTGSIERVICALLEN 475

Query: 542 FK----GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
                   LP WL+P Q  +  +      +A E+   L    +  + D R E++  K+RE
Sbjct: 476 TANQSVPQLPAWLAPTQVRLIPVAERHTSFADELCTRLNKAQIRTDLDDREESVGKKVRE 535

Query: 598 HSIKKIPIIIICGDKEASER--SIGIRRFGSTT---TQKVSLLDAIPILT 642
             +  +P +I+ GD E      ++ IR+         +++ + + I ++ 
Sbjct: 536 AGMDWVPYVIVIGDAEMETGKLTVTIRKLSEPRVPHKEQLDVEELITLVR 585


>gi|325969299|ref|YP_004245491.1| threonyl-tRNA synthetase [Vulcanisaeta moutnovskia 768-28]
 gi|323708502|gb|ADY01989.1| threonyl-tRNA synthetase [Vulcanisaeta moutnovskia 768-28]
          Length = 621

 Score =  253 bits (646), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 83/428 (19%), Positives = 169/428 (39%), Gaps = 31/428 (7%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           E       LE  ++  +    R+      +    G + +      + + +  Y  +   +
Sbjct: 188 EKEVLKMELEGGKEPRYIDYCRKFGFEWESMSDVGHMRYGPAATLMMELVEDYAWKLANE 247

Query: 290 DYEEI---NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA 346
               +       +  +       H   +   M+ ++       D     ++   C    A
Sbjct: 248 LGIPVFKIRGTNMFRRGERAIDEHARLFNERMYTIE------GDKDELIMRYAACFQQFA 301

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECL 405
           +    + SYR++P+ + E    YR E  G      R+R F   D H+F    +   +  L
Sbjct: 302 MIKDWVLSYRDIPIGMLEVADSYRYEQPGETVLCFRLRRFYMPDLHIFTKDLKNAMDVAL 361

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
           K+H +I    +  G + + +   T+       D L + A+   K +L             
Sbjct: 362 KLHEIIFREVRKLGRDYVSLYNVTKQFYDEHRDYLIELAKREGKPML------------I 409

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
            ++  +  ++    E+ + D + R  +  T Q D     RF   Y + + E  +PV+IH 
Sbjct: 410 RIMPEQKYYWVLNVEFHIVDELRRPREIATFQFDVGNAQRFGIKYRDENGEIRYPVIIHT 469

Query: 526 AVFGSIERFIGIMIENFK--------GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKS 577
           A+ GS+ER+I  +++             LP W+SPIQ  V  I+   + +A EI + L+ 
Sbjct: 470 AIIGSVERYIYALLDTAAITESKGEIPRLPTWVSPIQVRVIPISKEHLTFANEIVSRLED 529

Query: 578 HHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
             + ++ D R +ET+  ++R+     +P I++ GD+E     + +R  G     ++ + +
Sbjct: 530 RMIRVDIDDRFDETLAKRVRDAETFWVPYIVVIGDREVKTGKLSVRVRGVQKPIEMGIDE 589

Query: 637 AIPILTKE 644
               + +E
Sbjct: 590 FTSKIEEE 597


>gi|150400144|ref|YP_001323911.1| threonyl-tRNA synthetase [Methanococcus vannielii SB]
 gi|166225461|sp|A6US27|SYT_METVS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|150012847|gb|ABR55299.1| threonyl-tRNA synthetase [Methanococcus vannielii SB]
          Length = 622

 Score =  253 bits (646), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 91/419 (21%), Positives = 166/419 (39%), Gaps = 32/419 (7%)

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIF-WHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
           +  H K  +E ++           F W+ KG  I   L  Y+   + +     + TP + 
Sbjct: 197 EPPHVKYIKEKEICDYEPSSDAGHFRWYPKGKLIRDLLSDYVYNLVVENGGMPVETPVMY 256

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           D        H D +    +  +  +      +   L+   C G   +        + LP+
Sbjct: 257 DLQNNAIREHADKFGERQYRFRQGN------KDLMLRFAACFGQFMMKKDMYLLPKHLPL 310

Query: 361 RLAEFGSV-YRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI-ISIYKDF 418
           +L E  +  +R E  G L GL R+RGFT  D H  C       E  +    + +    DF
Sbjct: 311 KLYELSTYSFRYEQRGELVGLKRLRGFTMPDMHTVCIDMNQAMEAFENQFWMGLKTGDDF 370

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
                  K       R  ++   ++ E   K   +      +D I   +L G   ++  K
Sbjct: 371 -------KTPYSIIFRFTNEFFEENKEWFFKMAKEYKLKYGKDAIL-EILPGRKHYWVGK 422

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +  + D+ GR  +  T+Q+D     RF     +   +  HP+++H +  GSIER +  +
Sbjct: 423 VDMAVVDSFGRPIENPTVQIDVESAQRFGITVHDGD-KTIHPIILHCSPTGSIERVLCGL 481

Query: 539 IENFK--------GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
           +EN            LP WL+PIQA V  ++    E+A E+ N L+   +  + D R ++
Sbjct: 482 LENAYIKTLEDKPPALPTWLTPIQARVIPVSERNEEFALEVVNKLRESGIRTDFDDREDS 541

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGST-----TTQKVSLLDAIPILTKE 644
           +  KIR      +  +++ GD E   + + +     +       + +++ + I  +T E
Sbjct: 542 MGKKIRNAGTDWVNYVVVIGDNEMESKKLTVTLREESSIKQPKKESLTVGELIEKVTSE 600


>gi|327311872|ref|YP_004338769.1| threonyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
 gi|326948351|gb|AEA13457.1| threonyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
          Length = 612

 Score =  253 bits (645), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 90/446 (20%), Positives = 171/446 (38%), Gaps = 32/446 (7%)

Query: 211 DSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHR 270
           D   P+   +            +         +  + +  +            G + +  
Sbjct: 163 DEYDPVQFPLDKYPDLKALVEKEVFRKELPGGEPKYIEYVKRFTFDWEPMSDIGHMRYGP 222

Query: 271 KGWKIFQTLISY---MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
               + + +  Y   + R +     +I    +          H   +   ++ V+   D+
Sbjct: 223 DATIMMELVEDYAFQVARSLGIPIFKIRGTNMFKLSEKPIETHAKLFGERLYIVETDVDS 282

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
                   L+   C    A+    + SYR LP  + E    YR E  G    L R+R F 
Sbjct: 283 -------ILRYAACFQQFAMAKDWVISYRNLPFGMLEIADSYRYEQPGETVLLFRLRRFY 335

Query: 388 QDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
             D H+F     +      K+H  I    +    + + +   T    +   D L + A+ 
Sbjct: 336 MPDLHIFTKNLNEAIEVTYKLHEKIFEEIRKINRDYVSLYNITAEFYKGHKDYLVELAKR 395

Query: 447 IMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF 506
             K +L              +L  +  ++    E+ + D +GR  +  T Q+D     RF
Sbjct: 396 EGKPIL------------LRILPEQKYYWVLNVEFHIIDELGRPREIATFQIDVGNAMRF 443

Query: 507 NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK--------GNLPLWLSPIQAIVT 558
              Y++  ++  +PV+IH A+ GS+ER+I  + +             LP W++P+Q  + 
Sbjct: 444 GIKYIDEENKVKYPVIIHTAILGSVERYIFALFDTAALMEKRGEVPRLPTWITPVQVRII 503

Query: 559 TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERS 618
            +    +  A ++A+ L+   + ++ D R ET++ KIR+   + IP II+ G KEAS   
Sbjct: 504 PVNREYLRPASDLADELERRGIRVDIDDREETLSRKIRDAEREWIPYIIVIGQKEASSNM 563

Query: 619 IGIRRFGSTTTQKVSLLDAIPILTKE 644
           + +R  G    Q +S  D + ++ KE
Sbjct: 564 LTVRIRGKGQVQ-MSRQDLVEVVEKE 588


>gi|147920005|ref|YP_686240.1| threonyl-tRNA synthetase [uncultured methanogenic archaeon RC-I]
 gi|121683020|sp|Q0W3X9|SYT_UNCMA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|110621636|emb|CAJ36914.1| threonyl-tRNA synthetase [uncultured methanogenic archaeon RC-I]
          Length = 641

 Score =  252 bits (644), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 99/474 (20%), Positives = 193/474 (40%), Gaps = 38/474 (8%)

Query: 194 VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELT-----QYLYFLEESEKRDHRK 248
           V +  K  +   +Y+        L       +    +L      +         +  H +
Sbjct: 160 VSEAVKAEEKLKSYFYILDVDGQLKDPKTFDYKGHDKLKAFVDYEMAKKRAVDREPPHVE 219

Query: 249 LAREMDL-FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQ 306
           L R ++L  +      G + W+ KG  +   L  ++  +  K    E+ TP + D     
Sbjct: 220 LMRRLELADYEPGSDPGNMRWYPKGRAMKNMLEQFVLSEAAKKGAMEVETPIMYDMEHPT 279

Query: 307 QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFG 366
              + D + A  + V      I D +   L+   C G   + +    SYR LP+++ E  
Sbjct: 280 LKKYLDRFPARQYTV------IADKKNLFLRFAACFGQFLMNHDMTISYRNLPLKMIELT 333

Query: 367 SV-YRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIM 424
              +R E  G L GL R+R FT  D H  CT  +    E    + + I+     G +   
Sbjct: 334 RYSFRKEQRGELVGLRRLRAFTMPDMHTLCTDMDGAIKEFGDQYEMCINTLDTIGID--- 390

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +K       R   D  +++    ++ ++          +   +      ++  KFE+   
Sbjct: 391 IKTDYEVAIRFTKD-FYNNNTPFIQSLVKRAGKP----VIVEMWEERFFYFVLKFEFNYI 445

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D++ +     T+Q+D     R++  YV+ +  +  P+++H +  G+IER I  ++E    
Sbjct: 446 DSLNKASALSTVQIDVENAERYDINYVDQNGNRQRPIILHCSPSGAIERCIYGLLEKEAM 505

Query: 545 N--------LPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                    LP+WLSP Q  + TI+   V +A+ +A+ +   ++ ++ D R ET+  KIR
Sbjct: 506 ESEKGAVPMLPVWLSPTQVRIVTISEKHVPFAEALADRM--CNVRVDIDDREETVGKKIR 563

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK-----VSLLDAIPILTKES 645
           +   + IP ++  GD E +   I +     +   K     +++ + +  + KE+
Sbjct: 564 DAGKEWIPYVVTIGDAEMNGDKIPVVVRAESQQNKPAKVEMTVEELVERIHKET 617


>gi|325141961|gb|EGC64399.1| Threonyl and Alanyl tRNA synthetase second additional domain
           protein [Neisseria meningitidis 961-5945]
          Length = 234

 Score =  252 bits (643), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 99/225 (44%), Positives = 152/225 (67%), Gaps = 2/225 (0%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            + +T PDGS++ +    T + +A SI   LAK AVA  +NGK+ D  DP+  + +++II
Sbjct: 1   MLNITLPDGSVRQYESPVTVAQIAASIGAGLAKAAVAGRVNGKLVDACDPIVEDSAVQII 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           TP+D   + +IRHSCAH++  AV+ ++P  ++ IGP+IE+GFYYD   E+PF+ +++A I
Sbjct: 61  TPKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGFYYDIATEKPFTPEDVAAI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M+E+IA+D   +K      +A ++F+ + E YK+ +++ +P  E + +Y   E+ D+
Sbjct: 121 EARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLIDDMPEVEAMGMYHHQEYVDM 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNT 227
           CRGPHV +T  +K F KL K+AGAYWRGDSN  ML RIYGTAW  
Sbjct: 181 CRGPHVPNTRFLKNF-KLTKLAGAYWRGDSNNEMLQRIYGTAWAN 224


>gi|305663857|ref|YP_003860145.1| threonyl-tRNA synthetase [Ignisphaera aggregans DSM 17230]
 gi|304378426|gb|ADM28265.1| threonyl-tRNA synthetase [Ignisphaera aggregans DSM 17230]
          Length = 617

 Score =  251 bits (641), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 101/519 (19%), Positives = 197/519 (37%), Gaps = 42/519 (8%)

Query: 146 ARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMK--- 202
           A+E+     E  K E    + A          E+   C G  +    +  +     +   
Sbjct: 91  AKEIVSKVYEVLKNEGFNVVKA----PFGWYKEFELHCYGHPLSELSRTIRPTIRERRRT 146

Query: 203 VAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD-----HRKLAREMDLFH 257
           +   Y+    +  +         N   EL   +      ++ +       +  ++     
Sbjct: 147 IEKKYYILTPDGNIYKPGEFEFSNENIELKILVDKEVFKKEIEGGQGKVLQYLKKFGFEW 206

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMR---RKIKDDYEEINTPQVLDQHLWQQSGHWDSY 314
                 G + +      I + ++ Y       +      +    + + +      H + +
Sbjct: 207 EELSDHGHMRYEPHATVILEAVMQYSWIVANSLNIPVFRVKGTNMFNVNAEAVKQHAELF 266

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
              M+ V+       D   + L+   C    ++    + SYR+LP+ + E    YR E  
Sbjct: 267 GERMYEVRI------DNDRYILRFAACYQQFSILKDWVLSYRDLPMGMFEIADSYRYEQR 320

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
           G L    R+R F   D H+     E+     + + N I+   +  G E   +        
Sbjct: 321 GELVLGFRLRRFHMPDLHILTKDLEEAKRIAMIVRNKIVEEARKIGREYQAIYN------ 374

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
                 + +D  N     +  +  +    +   +      ++    EYI+ D + R  + 
Sbjct: 375 ------ITEDFFNTNFEYIVELVRAEGKPVLVVLYPPGLYYWVINVEYIIIDELKRPREI 428

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI--------ENFKGN 545
            T Q+D     RF   YV+ +  + HP++IH A+ GS+ER+I ++         EN    
Sbjct: 429 ATWQIDVGNAKRFGIKYVDENGVERHPIIIHTAILGSVERYIYMVFDTVARSESENKPPT 488

Query: 546 LPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPI 605
           LPLWLSPIQ  V  I+   + YA  +A  L  H + ++ D R+E++  KIR+  I+ IP 
Sbjct: 489 LPLWLSPIQVRVIPISKETLTYAINVAKELSRHGIRVDIDDRDESLGKKIRDAGIEWIPY 548

Query: 606 IIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +I+ G++E    +I +R       + + + + I ++ +E
Sbjct: 549 VIVIGEREMKTGTINVRIRKDGIQRVMHIDEFIKLINEE 587


>gi|118102209|ref|XP_001233746.1| PREDICTED: hypothetical protein [Gallus gallus]
          Length = 510

 Score =  251 bits (641), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 112/340 (32%), Positives = 173/340 (50%), Gaps = 12/340 (3%)

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
           T +          S + ++  AVQ  +    +      EDGF+ D    ++     EL  
Sbjct: 83  TNKCSLVWEAFWQSSSFVLGAAVQQFY-GATICSTVTTEDGFFCDAHMGDRTVQRSELPV 141

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +E+           F +   + E+  ELF+    +++++ +E        T+YR G    
Sbjct: 142 LEESCMAFARSQHCFERLEATREELLELFK--HNSFQLQRIEEEVMTPTATVYRCGPLLQ 199

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGP +  TG +     L     A+W+G S R  L RI   A+ + QEL  +    + +
Sbjct: 200 LCRGPLLPHTGLIGALRVLTGS-AAFWQGPSGRLSLQRIAAIAFPSTQELQAWQQAQDAA 258

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVL 300
             RDHR++ +E +LF       G  F+  +G  I+ TL+ ++R + +   + E+ TP + 
Sbjct: 259 ALRDHRRIGKEQELFFFHALSPGSCFFLPRGAHIYNTLVDFIRSEYQVRGFNEVVTPNIF 318

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
              LW+ SGHW  Y A+MF+     +T       +LKPMNCP H  +F H  +S+RELP+
Sbjct: 319 SPRLWELSGHWQHYSAHMFSFTAGTET------LSLKPMNCPAHCLMFAHRPRSWRELPL 372

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
           RLA+FG ++RNEP GSL GL RVR F Q+DAH+FC  EQ+
Sbjct: 373 RLADFGVLHRNEPPGSLTGLTRVRRFQQEDAHIFCALEQL 412



 Score = 77.9 bits (190), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 1/75 (1%)

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FRNETINYKIRE 597
           +E      PLWLSP+QA+V      A  YA+E+  +L+   +  + D     T+  KIR 
Sbjct: 409 LEQLPPRRPLWLSPLQAMVIPQAPDAEGYAREVHAMLRRDGVMADLDADAGATLGRKIRR 468

Query: 598 HSIKKIPIIIICGDK 612
             +      +  G++
Sbjct: 469 AQLTHYNFQLGKGER 483


>gi|91229885|ref|ZP_01262956.1| threonyl-tRNA synthetase [Vibrio alginolyticus 12G01]
 gi|91187354|gb|EAS73721.1| threonyl-tRNA synthetase [Vibrio alginolyticus 12G01]
          Length = 208

 Score =  251 bits (640), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 87/204 (42%), Positives = 122/204 (59%), Gaps = 6/204 (2%)

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDF 500
           WD +E  +K  L+++       I   +  GEGAFYGPK E+ L D + R WQCGT+Q+DF
Sbjct: 1   WDQSEEALKQSLESM------DIPYEIQEGEGAFYGPKIEFTLYDCLDRAWQCGTVQLDF 54

Query: 501 NLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTI 560
           NLP R  A YV  ++E+  PVMIHRA+ GS+ERFIGI+IE + G  P WL+P QA++  I
Sbjct: 55  NLPGRLGATYVGENNERLVPVMIHRAILGSLERFIGILIEEYAGFFPTWLAPEQAVLMNI 114

Query: 561 TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
           T     Y QEI   L+   +  + D RNE I +KIREH++K++P +++ GD+E     I 
Sbjct: 115 TDKQSGYVQEIVQKLQKSGIRAKADLRNEKIGFKIREHTLKRVPYMLVVGDQEMEAGEIA 174

Query: 621 IRRFGSTTTQKVSLLDAIPILTKE 644
           +R        K  + D I  +  E
Sbjct: 175 VRTRKGKDLGKFKVDDFIAYIQDE 198


>gi|21229406|ref|NP_635328.1| threonyl-tRNA synthetase [Methanosarcina mazei Go1]
 gi|34395862|sp|Q8PRY4|SYT_METMA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|20907999|gb|AAM33000.1| Threonyl-tRNA synthetase [Methanosarcina mazei Go1]
          Length = 634

 Score =  250 bits (639), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 103/474 (21%), Positives = 194/474 (40%), Gaps = 40/474 (8%)

Query: 194 VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY-----LYFLEESEKRDHRK 248
           V +  K    A +YWR  +    L  + G       +L Q+                H +
Sbjct: 158 VSEALKAEGTARSYWRILTPDGELHEVEGFDLTPYPKLQQFVNYEISKSRAVERAPPHVE 217

Query: 249 LAREMDL-FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ 306
           L R ++L  +     SG + ++ KG  +   L +Y+     +    E+ TP + D +   
Sbjct: 218 LMRRLELADYEPGSDSGNMRYYPKGRLVKSLLENYVLDVATEFGAMEVETPLMYDMNHPT 277

Query: 307 QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFG 366
              + D + A  ++++       D R   L+   C G   + +    SY+ LP+R+ E  
Sbjct: 278 LKKYLDRFPARQYSIE------SDKRHMFLRFAACFGQFLMNHDMTISYKNLPLRMIEMT 331

Query: 367 SV-YRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIM 424
              +R E  G L GL R+R FT  D H  C   +Q  N+  + ++L IS+ ++ G     
Sbjct: 332 RYSFRKEQRGELVGLRRLRAFTMPDMHTLCEDMDQAVNQFKEQYDLCISVLENVGIHIND 391

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
            +++ R            D     K ++  +  +    +   +      ++  KFE+   
Sbjct: 392 YEVAIR---------FTRDFYEANKDLVVNMAKTVNKPVLVEMWDTRFFYFVLKFEFNFV 442

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           DA+ +     T+Q+D     R++  YVN+  +   P ++H +  G+IER I  ++E    
Sbjct: 443 DALAKASALSTVQIDVENAERYDISYVNADGKLERPTVLHCSPSGAIERCIYALLEKAAM 502

Query: 545 NL--------PLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                     P+WLSP Q  +  I+   + +A+E+A  L       + D     I  K+R
Sbjct: 503 ETEEGKVPMLPVWLSPTQVRIVPISEKHIAFAEEVAKKLDFRVDVDDRDLS---IGKKVR 559

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRF-----GSTTTQKVSLLDAIPILTKES 645
           E   + +P +++ GDKE  E +I +              +++  +    + +E+
Sbjct: 560 EAGREWVPYVVVIGDKEMEESTINVTIREESGQDKPKKVQMTPEELNARIKEET 613


>gi|307069528|ref|YP_003878005.1| putative threonyl-tRNA synthetase [Candidatus Zinderia insecticola
           CARI]
 gi|306482788|gb|ADM89659.1| putative threonyl-tRNA synthetase [Candidatus Zinderia insecticola
           CARI]
          Length = 467

 Score =  249 bits (635), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 146/379 (38%), Positives = 237/379 (62%), Gaps = 14/379 (3%)

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK--DDYEEINTPQVL 300
           + DHR L ++ +LF   +   G+IFW++ G+ I++ +  Y+R  I    +Y+EI TP +L
Sbjct: 71  EFDHRILYKKNNLFFFKKKMPGLIFWNKNGYIIWKNINKYIRNNIYIKYNYKEIKTPIIL 130

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
             + W+++ HW+ Y+ NMF +K  +      + +ALKPMNCPGH+ ++N+   SY++LP+
Sbjct: 131 RDYFWKKTKHWNYYKKNMFLLKTKN------KKYALKPMNCPGHIQIYNYKKISYKKLPL 184

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           +  E G  +RNE +GSLHG++R++ F QDD H+FC K Q+  E +K +N+   +YK+F F
Sbjct: 185 KYGEIGECFRNEYTGSLHGILRLKNFNQDDGHIFCKKNQILLELIKFNNICKKVYKNFNF 244

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           + I +KLS RP+K++G++ LW+ +E I+  ++          I    +   GAFYGPK E
Sbjct: 245 KNIKIKLSLRPKKKIGNNYLWNLSEKILLKIILFFN------IKIKNIEKNGAFYGPKIE 298

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           Y LKD   + WQCGTIQ+DF +    N  Y N ++ K + +++HRA+ GSIERFIGI+IE
Sbjct: 299 YYLKDLNKKIWQCGTIQIDFIISKILNLNYNNKYNIKKNIIILHRAILGSIERFIGILIE 358

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           N KG +P +L PIQ ++  I +  ++Y   I  +LK +   I+    N  ++ K++++  
Sbjct: 359 NNKGYIPFYLIPIQIVIININNKILKYTNNIIKILKKNKFRIKKIINNNNLSLKLKKYFS 418

Query: 601 KKIPIIIICGDKEASERSI 619
            K    I+ G+KE  ++SI
Sbjct: 419 YKSYFCILIGNKENKKKSI 437


>gi|326675882|ref|XP_002665325.2| PREDICTED: probable threonyl-tRNA synthetase 2, cytoplasmic,
           partial [Danio rerio]
          Length = 464

 Score =  248 bits (633), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 86/241 (35%), Positives = 132/241 (54%), Gaps = 9/241 (3%)

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
           E     + + S+Y  FGF   +  LSTRP+K +G +ALW+ AE  ++  L+      +  
Sbjct: 216 EMKGCLDFLRSVYSVFGFSFQLH-LSTRPQKFLGDEALWNQAEKQLENSLNEFGEPWK-- 272

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE-KCHPV 521
               +  G+GAFYGPK +  +KDAIGR  QC TIQ+DF LP RFN  YV    + +  PV
Sbjct: 273 ----LNPGDGAFYGPKIDINIKDAIGRYHQCATIQLDFQLPIRFNLTYVGKDGDDRDRPV 328

Query: 522 MIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLS 581
           +IHRA+ GS+ER I I+ EN+ G  PLWLSP Q ++  +  S  EYA+++          
Sbjct: 329 IIHRAILGSVERMIAILTENYAGKWPLWLSPRQVMLVPVNPSLEEYAKQVCKRFVEAGFM 388

Query: 582 IETD-FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
            + D   +  +N KIR   + +   I++ G+KE    S+ +R   +    ++ +L+ +  
Sbjct: 389 ADADLDSSCLLNKKIRNAQLAQYNFILVVGEKERLSNSVNVRTRDNKVHGELPVLEVMER 448

Query: 641 L 641
           L
Sbjct: 449 L 449



 Score =  166 bits (420), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 82/281 (29%), Positives = 137/281 (48%), Gaps = 26/281 (9%)

Query: 113 PFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVT 172
             SS E + +E   + I+    PF +  +  E   E+F+  K  +K  IL      +  T
Sbjct: 1   AVSSTEFSDLELICRNIMKEKQPFERLEVKKETLLEMFKYNK--FKCRILNEKVTTDTTT 58

Query: 173 LYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELT 232
           +YR G   DLCRGPHVR TG++K F K+ K +  YW G S+   L RIYG ++   + L 
Sbjct: 59  VYRCGPLIDLCRGPHVRHTGKIKAF-KIYKNSSTYWEGRSDMETLQRIYGISFPDSKMLK 117

Query: 233 QYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDY 291
           ++  F EE++ RDHRK+ ++ +LF   +   G  F+  +G  I+ TL+ ++R +  +  +
Sbjct: 118 EWERFQEEAKSRDHRKIGKDQELFFFHDLSPGSCFFLPRGAFIYNTLMDFIRGEYSRRGF 177

Query: 292 EEINTPQVLDQHLWQQSGHWDSY-------------RANMFAVKCADDTIKDLRTFAL-- 336
           +E+ TP + +  LW+ SGHW  Y              + M        ++  +  F+   
Sbjct: 178 QEVATPNIYNSRLWETSGHWQLYTQSILESGQKLSIGSEMKGCLDFLRSVYSVFGFSFQL 237

Query: 337 ----KPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP 373
               +P    G  A++N    + ++L   L EFG  ++  P
Sbjct: 238 HLSTRPQKFLGDEALWNQ---AEKQLENSLNEFGEPWKLNP 275


>gi|90410627|ref|ZP_01218643.1| threonyl-tRNA synthetase [Photobacterium profundum 3TCK]
 gi|90328868|gb|EAS45152.1| threonyl-tRNA synthetase [Photobacterium profundum 3TCK]
          Length = 195

 Score =  246 bits (628), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 86/182 (47%), Positives = 116/182 (63%)

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
           I   +  GEGAFYGPK E+ L D + R WQCGT+Q+DF LP R  A YV   +E+  PVM
Sbjct: 3   IPFEIQEGEGAFYGPKIEFTLHDCLDRAWQCGTVQLDFALPERLGATYVGEDNERHTPVM 62

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSI 582
           IHRA+ GS+ERFIGI+IE + G  P WL+P QA+V  IT S  EYAQEI   L+   + +
Sbjct: 63  IHRAILGSLERFIGILIEEYAGFFPTWLAPQQAVVMNITDSQSEYAQEIVKKLQKCGIRV 122

Query: 583 ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             D RNE I +KIREH++K++P +++CGDKE     I +R        K+ + + +  L 
Sbjct: 123 NADLRNEKIGFKIREHTLKRVPYMLVCGDKEVEAGEIAVRTRKGKDLGKLKIDELVAFLQ 182

Query: 643 KE 644
           +E
Sbjct: 183 QE 184


>gi|145532881|ref|XP_001452193.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124419876|emb|CAK84796.1| unnamed protein product [Paramecium tetraurelia]
          Length = 428

 Score =  246 bits (628), Expect = 9e-63,   Method: Composition-based stats.
 Identities = 92/358 (25%), Positives = 172/358 (48%), Gaps = 38/358 (10%)

Query: 3   SDIKLTFPDGSIKNFPVH-ATGSDVAESISRSLAKKAVAVAI------------------ 43
           + I +T  DG          T   +A  IS+ LA+  VA  +                  
Sbjct: 58  TPITITLKDGKKIEGKKWVTTPLMIALGISKKLAENMVAAKVVYDNIFEKNFVDVDHEDQ 117

Query: 44  -----------NGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE 91
                      +  + DL+ P+  +  +E+++ +D     V  HS +HI+  A++ ++  
Sbjct: 118 QQQASTLNLKPDYLIWDLTRPLEGDCQLELLSFDDNNGKEVFWHSSSHILGSALEEVY-G 176

Query: 92  VQVAIGPIIEDGFYYDFD-KEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELF 150
             + IGP I+ GF+YD    +   + ++  +IEK   ++ A    F +  L+ ++  EL 
Sbjct: 177 CHLCIGPAIDGGFFYDCYIGDYKVTQNDYVKIEKAASDLAASKQEFQRAVLTKDECLEL- 235

Query: 151 ESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWR 209
                 +K +++   IP     T Y+ G   DLC GPH+ +T  VK F    K + AYW 
Sbjct: 236 -FGTNPFKRQLITNKIPEGAMTTAYKCGNLIDLCTGPHLPNTSYVKAFQVT-KNSAAYWL 293

Query: 210 GDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWH 269
           G +    L R+YG ++ +++ L +Y+   +E   RDHR + ++ +L+   +   G  F++
Sbjct: 294 GKNTNDDLQRVYGVSFPSKKLLDEYVKIQKELALRDHRNVGKKQNLYLFHQLSPGSAFFY 353

Query: 270 RKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADD 326
             G  I+ TL++++RR+     Y+E+ +P + +  LW+ SGH+D Y+ N+F +   ++
Sbjct: 354 PSGAHIYNTLMNFLRRQYYIRGYQEVISPNIFNAQLWKISGHYDKYKENLFFINMGEE 411


>gi|330507458|ref|YP_004383886.1| threonyl-tRNA synthetase [Methanosaeta concilii GP-6]
 gi|328928266|gb|AEB68068.1| threonyl-tRNA synthetase [Methanosaeta concilii GP-6]
          Length = 621

 Score =  246 bits (627), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 104/548 (18%), Positives = 213/548 (38%), Gaps = 53/548 (9%)

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
           +     +I K M ++++++   ++      KA  +        ++     +   E V+  
Sbjct: 89  TPATAVKILKGMADVLSQNYEVMRAPFGWYKAFTISCKGHPLSELSRSIRLGEGEVVSEA 148

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
                        ++S  +   +++++ + G     D          G     +    + 
Sbjct: 149 -------------LKSEAKAVSYWRVLDLDGKLVDADKFN-----FEGHTNLQKFANYEI 190

Query: 235 LYFLEESEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYE 292
                  +   H +L R ++L        SG + ++ KG  +   L + +  K  D    
Sbjct: 191 SKARAVDKVPPHVELMRRLELVDYEPGSDSGNMRYYPKGRLVKSLLETLVLEKAADMGAM 250

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+ TP + D        + D + A  + +        D R   L+   C G   + +   
Sbjct: 251 EVETPIMYDMEHPTLKKYLDRFPARQYQI------DSDKRKLFLRFAACFGQFLMGHDMS 304

Query: 353 KSYRELPVRLAEFGSV-YRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNL 410
            SY+ LP+++ E     +R E  G L G+ R+R FT  D H           E  K +  
Sbjct: 305 ISYKSLPLKMIEMTRYSFRREQRGELVGIRRLRAFTMPDMHTMSRDMHSAIEEFRKQYLA 364

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
            IS+ K+ G E    +++ R  +       + + +  + G++D IK      +   +   
Sbjct: 365 SISVLKEVGLEVEDYEVAIRFTR-----DFYKENQEFIAGLVDIIKKP----VLIEMWDE 415

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
              ++  KFE+   D + +     T+Q+D     R++  Y++    +  P+++H +  G+
Sbjct: 416 RFFYFVLKFEFNFVDTMDKASALSTVQIDVENAERYDINYIDESGARRRPILLHCSPSGA 475

Query: 531 IERFIGIMIENFK-----GNLP---LWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSI 582
           IER +  ++E        G LP    WLSP Q  +  +     E A  +A +L       
Sbjct: 476 IERVMYAILEKAARLSLQGKLPMLETWLSPTQVRIIPVAERHQERALALAGIL---GFRT 532

Query: 583 ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT-----TQKVSLLDA 637
           + D R+ET+  KIR+   + +P + + GD+E     + +     +T      + +++ + 
Sbjct: 533 DIDDRDETVGKKIRDAGREWVPYVAVIGDEELQSGRLAVTIRSESTPKSPAKKSMTVDEL 592

Query: 638 IPILTKES 645
              LT E+
Sbjct: 593 KERLTGET 600


>gi|218200879|gb|EEC83306.1| hypothetical protein OsI_28675 [Oryza sativa Indica Group]
          Length = 306

 Score =  245 bits (626), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 79/219 (36%), Positives = 117/219 (53%), Gaps = 7/219 (3%)

Query: 427 LSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDA 486
              RPEK +G    W+ AE  +   L+      Q      +  G+GAFYGPK +  + DA
Sbjct: 89  HLQRPEKYLGDIETWNKAEQQLTEALNEFGKPWQ------INEGDGAFYGPKIDIGVFDA 142

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK-CHPVMIHRAVFGSIERFIGIMIENFKGN 545
           + R +QC T+Q+DF LP RF   Y      K   PVMIHRA+ GS+ER   I++E++ G 
Sbjct: 143 LKRKFQCATLQLDFQLPLRFKLTYSAEDEAKLERPVMIHRAILGSVERMFAILLEHYNGK 202

Query: 546 LPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPI 605
            PLWLSP QAIV +I+S++VEYA+++   +      +  D  + TI  K+RE  + +   
Sbjct: 203 WPLWLSPRQAIVCSISSNSVEYAKQVRARIHEAGFHVAIDETDRTIQKKVREAQLAQFNY 262

Query: 606 IIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           I++ G +EA    + +R         VS+ D I    +E
Sbjct: 263 ILVVGAQEAETGQVSVRVRDKAELATVSIDDIITRFKEE 301


>gi|255027702|ref|ZP_05299688.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL J2-003]
          Length = 204

 Score =  245 bits (626), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 74/206 (35%), Positives = 120/206 (58%), Gaps = 7/206 (3%)

Query: 440 LWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVD 499
           +W+ A+ ++K  +D ++      ++     GE AFYGPK +  +K AIG++    T+Q+D
Sbjct: 1   MWEKAQAMLKSAMDEME------MDYFEAEGEAAFYGPKLDVQVKTAIGKEETLSTVQLD 54

Query: 500 FNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTT 559
           F LP RF+  Y+    EK  PV+IHR V  ++ERF+  +IE +KG  P WL+P+Q  +  
Sbjct: 55  FLLPERFDLTYIGEDGEKHRPVVIHRGVVSTMERFVAYLIEEYKGAFPTWLAPVQMEIIP 114

Query: 560 IT-SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERS 618
           +   + ++YA+ + + L+   L  E D RNE + YKIRE   KKIP  ++ GD+E    S
Sbjct: 115 VNADAHLDYAKGVQDKLQRAGLRAEVDDRNEKLGYKIREAQTKKIPYALVLGDQEVEAGS 174

Query: 619 IGIRRFGSTTTQKVSLLDAIPILTKE 644
           + +RR+GS  ++ + L   I  +  E
Sbjct: 175 VNVRRYGSKDSETMDLDAFIAQVVAE 200


>gi|106364390|dbj|BAE95216.1| predicted threonyl-tRNA synthetase [unclutured Candidatus
           Nitrosocaldus sp.]
          Length = 685

 Score =  245 bits (626), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 92/462 (19%), Positives = 186/462 (40%), Gaps = 74/462 (16%)

Query: 236 YFLEESEKRDHRKLAREMDL-FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEE 293
              E  E+  H +L + + +  H     +G + ++ KG  I   +  Y+ RK+ +    E
Sbjct: 208 KRREVDEEPPHVRLMKRLAIADHEPASDAGNLRFYPKGRLIKSLIEQYVTRKVIEYGAVE 267

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           + TP + D      + +++ + A  + ++       + + F L+   C G   +      
Sbjct: 268 VETPIMYDVEHPSLASYFNRFPARQYMIE------SEGKEFFLRFAACFGQFLMAKDFTI 321

Query: 354 SYRELPVRLAEFGSV-YRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLI 411
           SY+ LP+++ E     +R E SG L GL R+R FT  D H  C   EQ   E LK   L 
Sbjct: 322 SYKHLPLKIYELTRYSFRREKSGELVGLRRLRAFTMPDCHALCRDIEQAKQEMLKRLELS 381

Query: 412 ISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
             + +  G   +          RV SD  +++    +  ++  I       +        
Sbjct: 382 KQVIEGLGISLMD---DVEVAIRVTSD-FYNENRGFIAELVRRIGKP----VLLEEWSER 433

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
             ++  K+E+   D + +     T Q+D    +R+  ++V+    + +P+++H +  G++
Sbjct: 434 FFYFVLKWEFNFVDNLAKASALSTDQIDVENGARYGIYFVDEDGSRKNPIILHNSPSGAV 493

Query: 532 ERFIGIMI--------ENFKGNLPLWLSPIQAIVTTITSS-------------------- 563
           ER +  ++        E     LPLWLSP Q  +  +++                     
Sbjct: 494 ERVMYALLEKAYRMQKEGKTPMLPLWLSPTQVRLIPVSTRGAVKGSSSSSNNNNKDDGDG 553

Query: 564 ----------------------------AVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
                                        ++Y   I + L+   + ++ D R+E++  +I
Sbjct: 554 GRSGESSMGVEANSNSSSNSSNNVSSITYLDYCNSIMHRLERSSIRVDIDDRDESVGKRI 613

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
           RE  ++ IP I++ G+KE +   + +R   S   +++S+ + 
Sbjct: 614 REAEMEWIPYIVVVGEKEIASDRLSVRDRASGKVREMSVEEL 655


>gi|226330401|ref|ZP_03805919.1| hypothetical protein PROPEN_04319 [Proteus penneri ATCC 35198]
 gi|225201196|gb|EEG83550.1| hypothetical protein PROPEN_04319 [Proteus penneri ATCC 35198]
          Length = 242

 Score =  245 bits (625), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 100/240 (41%), Positives = 146/240 (60%), Gaps = 3/240 (1%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  DVA  I   LAK  +A  +NG++ D  + +  + ++ IIT +
Sbjct: 4   ITLPDGSQRQFENAVSVMDVAADIGPGLAKACIAGRVNGELVDACELIEHDANLAIITAK 63

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L +IRHSCAH++  A++ +WP+ ++AIGP+IE+GFYYD D +   + ++L  +EK+
Sbjct: 64  DDEGLEIIRHSCAHLLGHAIKQLWPQTKMAIGPVIENGFYYDVDLDHSLTQEDLETLEKR 123

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCR 184
           M E+   D   +K+ +S  +ARE F S+ E YKV IL E+I       LY   E+ D+CR
Sbjct: 124 MLELAKTDYDVIKKRVSWAEARETFVSRGEDYKVAILDENISQDSQPGLYHHQEYVDMCR 183

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPHV +      F KL K+AGAYWRG+S+  ML RIYGTAW  ++ +   L  L  S K 
Sbjct: 184 GPHVPNMRFCHNF-KLQKIAGAYWRGNSDNKMLQRIYGTAWADKKTVKSLLRSLRRSCKT 242


>gi|257051518|ref|YP_003129351.1| threonyl-tRNA synthetase [Halorhabdus utahensis DSM 12940]
 gi|256690281|gb|ACV10618.1| threonyl-tRNA synthetase [Halorhabdus utahensis DSM 12940]
          Length = 620

 Score =  245 bits (625), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 88/415 (21%), Positives = 167/415 (40%), Gaps = 28/415 (6%)

Query: 239 EESEKRDHRKLAREMDLFHIAE-DGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
            E E+  H  L +E  L    E    G + W+ +G  +   L+ Y+   + D     + T
Sbjct: 201 NEGEEPPHVDLMQEKGLVGYDELSDVGNLRWYPRGKLVRDALMEYVNDLVVDYGGMPVET 260

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P + D        H   +    +  +  D      R   L+   C G  ++      S  
Sbjct: 261 PIMYDLGARSIDEHAGKFGERQYRFESGD------RRMMLRFAACFGQFSIMRDMHISVN 314

Query: 357 ELPVRLAEFGSV-YRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISI 414
           +LP+R+ E  +  +R E  G + GL R+R FT  D H    + EQ   E  K   L +  
Sbjct: 315 DLPLRVYEMSTYSFRREQRGEVTGLKRLRAFTMPDMHTATESMEQAREELRKQAELALQT 374

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            +D           TR          ++D E  ++ V+  +   S       ++     +
Sbjct: 375 SEDLDLNYEPAIRMTR--------EFYEDNEAWVEDVVAELGKPS----LIEIIPERHHY 422

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           +  K ++   D +GR  +  T+Q+D     RF+  Y +  ++  HP ++H +  G IER 
Sbjct: 423 WSAKIDFAAIDGLGRPIENPTVQIDVESAERFDIEYTDG-TDSHHPPILHYSPSGGIERV 481

Query: 535 IGIMIENFK----GNLPLWLSPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNE 589
           +  ++E+        LP WLSP Q     +   S ++Y + + + L+   +  + D R+E
Sbjct: 482 LAALLEDTASMDTPQLPTWLSPTQVRFIPVNPDSHLDYCEGLVDELEDADVRADIDDRDE 541

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           ++  +I +     +P  ++ GD+E    +IG+          ++  +    +  +
Sbjct: 542 SVGKRIAKAETDWVPYYVVVGDREIEGETIGVNVRADDDEIDLTPAELREAVLDD 596


>gi|261883755|ref|ZP_06007794.1| threonyl-tRNA synthetase [Campylobacter fetus subsp. venerealis
           str. Azul-94]
          Length = 225

 Score =  245 bits (625), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 83/208 (39%), Positives = 130/208 (62%), Gaps = 6/208 (2%)

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           VG DA+W+ A   +K  LD      +  +  G+  G GAFYGPK +  + DA+ R WQCG
Sbjct: 16  VGDDAVWEIATKALKDALD------EKGLKYGIDEGGGAFYGPKIDIKITDALKRKWQCG 69

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQ 554
           TIQVDFNLP+RF+  Y++ ++E+  PVM+HRA+ GS ERFIGI++E+  G LP W++P Q
Sbjct: 70  TIQVDFNLPARFDLGYIDENNERKQPVMLHRAIMGSFERFIGILLEHTAGELPFWIAPTQ 129

Query: 555 AIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
            ++  I++   +YA E+ +LL    +  E   +NET+N KIR    +++P+II+ GD E 
Sbjct: 130 VVIIPISNEHHKYANEVHSLLLDMDVDSEIFNKNETLNKKIRTAEKQRVPMIIVLGDNEV 189

Query: 615 SERSIGIRRFGSTTTQKVSLLDAIPILT 642
           + R + +R   +   + +SL + +  + 
Sbjct: 190 TNRGVALRDRRAREQKDMSLDEFLGFIQ 217


>gi|46446335|ref|YP_007700.1| putative threonine-tRNA ligase [Candidatus Protochlamydia
           amoebophila UWE25]
 gi|46399976|emb|CAF23425.1| putative threonine-tRNA ligase [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 553

 Score =  243 bits (619), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 123/562 (21%), Positives = 245/562 (43%), Gaps = 34/562 (6%)

Query: 97  GPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEA 156
           G     GFYYDF  +Q   ++ ++ IE  ++ +I  + P     +  E A+ LF+   + 
Sbjct: 3   GGETSYGFYYDFIFQQKVDNNLVSLIEVHLKTLIKENHPIQALSMMRENAQALFDHHDQP 62

Query: 157 YKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPM 216
           +  E+         V + +  +++ LC  P + ST ++    KL+++       +    +
Sbjct: 63  FLAELAGEKEEN-IVEILQFKQFYGLCSFPLISSTEEIGVV-KLLELDFRQEEREGETLV 120

Query: 217 LSRIYGTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAEDGSGV-IFWHRKGWK 274
           ++R+ GT++   Q+L Q+L   +   +K+DHR+L  +++LF   E  + +   WH KG  
Sbjct: 121 VTRLLGTSFPDNQKLKQFLKLYDSYRKKKDHRQLGSDLNLFSFPEKLTALECVWHPKGNL 180

Query: 275 IFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           +   L  ++ ++      +E +NTP V++ H ++            F V           
Sbjct: 181 LLMLLKEWVTKEFSKIGKWEPVNTPYVVNSHFFK------------FNVDYLPTVEMGTE 228

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
            +   P     H  +F    K   +LP+   E+   Y         GL    G++ D + 
Sbjct: 229 EYVFSPSPLIQHHYLFKRKKKDSSDLPIHFFEWAKKYVLSTHPLKEGLFNAVGWSGDFST 288

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
           +F + EQ+  E +     I  I + FGFE     +++R +                K  +
Sbjct: 289 IFSSDEQLNQEFISSLQFIEQIIRIFGFEARWCLVTSRQKSFKFRQE---------KAAI 339

Query: 453 DTIKN-SSQDRINTGVLLGE---GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
           D I+   S   ++  +           GP+ E  + D IGR+W    + +      + + 
Sbjct: 340 DRIEKILSLCTLSYPLQDEHFESDCLEGPRLELRVADEIGREWVISALTLISIHYLKKDK 399

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYA 568
                 +E   P +I R ++ S++R I ++IE F+G+ PLWL+P Q  +  +   ++ YA
Sbjct: 400 TE-KQENEITIPFVIVRQIWESLDRLIALLIERFEGSFPLWLAPEQVRILAVGEGSLSYA 458

Query: 569 QEIANLLKSHHLSIETDF-RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS- 626
           ++I    +S  L +  DF ++  +  KI     +K+P ++I G++E    +I  R     
Sbjct: 459 RQIETRCRSQGLRVGVDFKKSTKLGEKIHLAEKEKVPYLLIIGEQEIKRNAITFRSVEKP 518

Query: 627 TTTQKVSLLDAIPILTKESLPP 648
             ++ + L + +  + ++ + P
Sbjct: 519 GKSESIRLEEFLEQIRQKCVCP 540


>gi|254230539|ref|ZP_04923908.1| threonyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|151936930|gb|EDN55819.1| threonyl-tRNA synthetase [Vibrio sp. Ex25]
          Length = 254

 Score =  242 bits (618), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 99/239 (41%), Positives = 154/239 (64%), Gaps = 4/239 (1%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  +VA+SI   LAK  +A  +NG   D  D +  + S+EIIT +
Sbjct: 17  ITLPDGSQRQFDNPVSTMEVAQSIGPGLAKATIAGRVNGNRVDACDLIEEDASLEIITVK 76

Query: 66  DP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  A++ ++P+ ++AIGP I++GFYYD D ++  + ++L +IEK
Sbjct: 77  DEVDGLEIVRHSCAHLLGHALKQLYPQAKMAIGPTIDNGFYYDIDLDESLTQEDLEKIEK 136

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLC 183
           +M+E+       +K+ +S ++AR+ FES+ E YKVEIL E++   +   LY   E+ D+C
Sbjct: 137 RMKELAKTKYEVVKKKVSWQEARDTFESRGEPYKVEILDENVSRDDRPGLYHHEEYIDMC 196

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           RGPHV +    + F  L  VAGAYWRG+S+  ML RIYGTA++ ++ L  +L  LEE+ 
Sbjct: 197 RGPHVPNMSFCQHFTLL-NVAGAYWRGNSDNKMLQRIYGTAFHDKKALKAHLTRLEEAA 254


>gi|282163066|ref|YP_003355451.1| threonyl-tRNA synthetase [Methanocella paludicola SANAE]
 gi|282155380|dbj|BAI60468.1| threonyl-tRNA synthetase [Methanocella paludicola SANAE]
          Length = 636

 Score =  242 bits (618), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 98/492 (19%), Positives = 193/492 (39%), Gaps = 42/492 (8%)

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELT--- 232
           +G   ++C G        V +  K  +   +Y+        L       +   ++L    
Sbjct: 141 EGSTINICAG---EKPEVVSEAVKNEEKLKSYFYVMDVDGTLKDPKTFDYKGHEKLKAFV 197

Query: 233 --QYLYFLEESEKRDHRKLAREMDL-FHIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIK 288
             +            H +L R ++L  +      G + ++ KG  +   L +Y+     K
Sbjct: 198 DYEMAKKRAVDRVPPHVELMRRLELADYEPGSDPGNMRFYPKGRMVKNLLENYVLMEAAK 257

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
               E+ TP + D        + D + A  + V      I D +   L+   C G   + 
Sbjct: 258 KGAMEVETPIMYDMEHPTLKKYLDRFPARQYTV------IADKKNLFLRFAACFGQFLMS 311

Query: 349 NHGLKSYRELPVRLAEFGSV-YRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN-ECLK 406
           +    SY+ LP+++ E     +R E  G L GL R+R FT  D H  C        E   
Sbjct: 312 HDMTISYKNLPLKMIELTRYSFRKEQRGELVGLRRLRAFTMPDMHTLCADMAGATSEFRD 371

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
            + + I+     G      +++ R  +       +D  +  +KG++          +   
Sbjct: 372 QYEMCINTLDTIGLTLKDYEVAIRFTR-----DFYDQNKGFIKGLVKRAGKP----VVIE 422

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
           +      ++  KFE+   D++ +     T+Q+D     R++  YV+    K +P ++H +
Sbjct: 423 MWDQRFFYFVLKFEFNFIDSLDKASALSTVQIDVENAERYDITYVDQDGSKKYPTILHCS 482

Query: 527 VFGSIERFIGIMIE--------NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSH 578
             G+IER I   +E             LP+WLSP Q  + +++    +Y + +A  L+ +
Sbjct: 483 PSGAIERCIYAQLEKQFMESEKGQVPMLPVWLSPTQVRIISLSDRHADYCRRLAGELRPN 542

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK-----VS 633
              ++ D R ET++ K+R+   + IP ++  GD E  +    +     +   K     ++
Sbjct: 543 --RVDIDDREETVSKKVRDAGKEWIPYVVTIGDAEIGKDKFPVVVRSESQPNKPLKVEMT 600

Query: 634 LLDAIPILTKES 645
           + +    L K++
Sbjct: 601 VEELKARLAKDT 612


>gi|76664827|emb|CAJ17850.1| threonyl-tRNA synthetase [Candidatus Phytoplasma solani]
          Length = 302

 Score =  241 bits (616), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 113/310 (36%), Positives = 195/310 (62%), Gaps = 11/310 (3%)

Query: 77  CAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQIEKKMQEIIARDSP 135
            AH+MA+A++ ++P+  + IGP I++GFYYD D  +   S ++ A IEK M++I   + P
Sbjct: 1   TAHLMAQAIKRLYPQALLTIGPAIKEGFYYDIDFQKHDISKNDFAAIEKMMKQISLENHP 60

Query: 136 FLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVK 195
            +++ +S++KA+E+       YK+ +LE     E +++Y QGE+FDLCRG H+  T  +K
Sbjct: 61  IIREEVSYQKAKEI--FANNPYKIVLLEKHKE-EVISIYHQGEFFDLCRGGHLLKTSLMK 117

Query: 196 KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDL 255
            F KL+K++G+Y++ ++    L+RIYGT++  +Q L  +L  LEE ++RDH++L +E+DL
Sbjct: 118 HF-KLLKISGSYFQSNAKNQTLTRIYGTSFFQKQALIDHLQLLEERKQRDHKRLNKELDL 176

Query: 256 FHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDS 313
           F  +++   G+ F   KG  + + +  Y+  +++  +Y  + TP + +  L++ SGH + 
Sbjct: 177 FMFSKEVGLGLPFLLPKGATLRRIVERYIVDKELSYEYHHVYTPIMTNTELYRISGHLEH 236

Query: 314 YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP 373
           Y  NMF V      ++      L+PMNCP H+ ++    +SY+ELP R+AE G ++R E 
Sbjct: 237 YAENMFPVM----RLESGEQLVLRPMNCPHHMIIYKKTPRSYKELPFRIAELGMMHRFEK 292

Query: 374 SGSLHGLMRV 383
           SG++ GL RV
Sbjct: 293 SGAVSGLQRV 302


>gi|256070953|ref|XP_002571806.1| threonyl-tRNA synthetase [Schistosoma mansoni]
 gi|238656954|emb|CAZ28036.1| threonyl-tRNA synthetase, putative [Schistosoma mansoni]
          Length = 563

 Score =  241 bits (615), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 99/345 (28%), Positives = 159/345 (46%), Gaps = 17/345 (4%)

Query: 32  RSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWP 90
           ++LA+ AV   +NG++ DL  P  +  S+EI   +      V  HS AH++ EA++  + 
Sbjct: 41  KTLAEHAVIAKVNGELWDLLRPFEKNSSLEIYNFDHKDGQYVFWHSSAHVLGEALERCYS 100

Query: 91  EVQVAIGPIIEDGFYYDFDKEQP----FSSDELAQIEKKMQEIIARDSPFLKQYLSHEKA 146
              +  GP IE+GFYYD             ++L+ +E     I   + PF +  +  E  
Sbjct: 101 GH-LCYGPPIEEGFYYDMWVPNQQHSGLRPEDLSIVENVCHSICKENQPFERLEMKKEDL 159

Query: 147 RELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGA 206
            ++F      +K  I+         T+YR G   DLCRGPHVR TG +K    + K + +
Sbjct: 160 LKMFAY--NEFKCRIIHEKIDTPTTTVYRCGPLIDLCRGPHVRHTGCIK-ALSVTKCSSS 216

Query: 207 YWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVI 266
           YW G ++   L R+YG ++   + L ++ +  EE+ KRDHRKL  E  LF   E   G  
Sbjct: 217 YWEGRTDAETLQRVYGVSFPDPKRLKEWKHIQEEAAKRDHRKLGVEQKLFFFHELSPGSC 276

Query: 267 FWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD 325
           F+   G  I+ TL+S++R +     ++E+ TP + +  LW+QSGHW  Y     ++    
Sbjct: 277 FFLPAGAHIYNTLVSFIRSEYWKRGFQEVITPNIYNSALWEQSGHWQHYSQLKESLDEVG 336

Query: 326 D--TIKDLRTFALKPMNCPGHVAVFNHGLKSYR-----ELPVRLA 363
               +         P      +       +        +LPVR  
Sbjct: 337 LKWELNPGDGAFYGPKIDINIMDALRRRHQCATIQLDFQLPVRFN 381



 Score =  209 bits (532), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 70/273 (25%), Positives = 115/273 (42%), Gaps = 44/273 (16%)

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENI-----MKGVLDTIKNSSQDRI 463
           ++  ++      E             + + ALW+ + +      +K  LD +       +
Sbjct: 284 HIYNTLVSFIRSEYWKRGFQEVITPNIYNSALWEQSGHWQHYSQLKESLDEVG------L 337

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS---------- 513
              +  G+GAFYGPK +  + DA+ R  QC TIQ+DF LP RFN  Y +           
Sbjct: 338 KWELNPGDGAFYGPKIDINIMDALRRRHQCATIQLDFQLPVRFNLSYASETDNPSGSDNN 397

Query: 514 ----------------------HSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLS 551
                                       PV+IHRA+ GS+ER I I+ E++ G  P WLS
Sbjct: 398 CNNISNTTNGISNHHEPINHQTDLNTHRPVIIHRAILGSVERIIAILTESYGGKWPFWLS 457

Query: 552 PIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICG 610
           P Q +V  + S+  EYA ++ N L      +  D     T+N KIR   + +   I++ G
Sbjct: 458 PRQVLVVPVVSACDEYAIDVKNRLHDAGFMVSVDTDPGRTLNKKIRNGQLLQNNFILVVG 517

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +KE +  ++ +R   +    +  +   I    +
Sbjct: 518 EKEIANGTVNVRTRDNKVHGEHPVEHVIERFRQ 550


>gi|260899056|ref|ZP_05907497.1| threonine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
 gi|308088693|gb|EFO38388.1| threonine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
          Length = 229

 Score =  240 bits (613), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 95/225 (42%), Positives = 147/225 (65%), Gaps = 4/225 (1%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  +VA+SI   LAK  +A  +NG   D  D +  + S+EIIT +
Sbjct: 4   ITLPDGSQRQFDNPVSTMEVAQSIGPGLAKATIAGRVNGNRVDACDLIEEDASLEIITVK 63

Query: 66  DP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  A++ ++P+ ++AIGP I++GFYYD D ++  + ++L +IEK
Sbjct: 64  DEVDGLEIVRHSCAHLLGHALKQLYPQAKMAIGPTIDNGFYYDIDLDESLTQEDLEKIEK 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLC 183
           +M+E+       +K+ +S ++AR+ FES+ E YKVEIL E++   +   LY   E+ D+C
Sbjct: 124 RMKELAKTKYEVVKKKVSWQEARDTFESRGEPYKVEILDENVSRDDRPGLYHHEEYIDMC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQ 228
           RGPHV + G  + F  L  VAGAYWRG+S+  ML RIYGTA++ +
Sbjct: 184 RGPHVPNMGFCQHFTLL-NVAGAYWRGNSDNKMLQRIYGTAFHDK 227


>gi|294463365|gb|ADE77216.1| unknown [Picea sitchensis]
          Length = 215

 Score =  237 bits (605), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 70/216 (32%), Positives = 116/216 (53%), Gaps = 7/216 (3%)

Query: 430 RPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGR 489
            PEK +G    W  AE  +   L+      Q      +  G+GAFYGPK +  + DA+ R
Sbjct: 1   MPEKHLGDLETWQRAEAALTEALNAFGKPWQ------INEGDGAFYGPKIDITVFDALKR 54

Query: 490 DWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPL 548
            +QC TIQ+DF LP RF+  Y      ++  PVMIHRA+ GS+ER + I++E++ G  P 
Sbjct: 55  KFQCATIQLDFQLPIRFDLSYSTEDEAKRERPVMIHRAILGSVERMLAILLEHYAGKWPF 114

Query: 549 WLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIII 608
           WLSP QAIV  ++  + +YA  + + +      ++ D  +  I  KIRE  + +   I++
Sbjct: 115 WLSPRQAIVCPVSEKSSDYALRVRDQIHQAGYYVDVDTSDRKIQKKIREAQLAQYNYILV 174

Query: 609 CGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            G++EA+   + +R    +  +  S+ + + +  +E
Sbjct: 175 VGEEEANTGQVSVRIRDKSAHEVRSMDELLKLFREE 210


>gi|156937646|ref|YP_001435442.1| Ser-tRNA(Thr) hydrolase [Ignicoccus hospitalis KIN4/I]
 gi|156566630|gb|ABU82035.1| Ser-tRNA(Thr) hydrolase [Ignicoccus hospitalis KIN4/I]
          Length = 462

 Score =  236 bits (602), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 120/402 (29%), Positives = 207/402 (51%), Gaps = 38/402 (9%)

Query: 272 GWKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
           G  + +T + ++  K      Y  + TP +    L++ +GH   Y+ NMF +    D   
Sbjct: 46  GGGVLRTALKHVLHKYHARKGYYVVETPIIARTTLYELTGHLKFYKENMFLLNIEGD--- 102

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYR---ELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
               +A+KPMNCP HV +F + L+ Y    +LP ++ E G+V+R E +G+L GL+RVR F
Sbjct: 103 ---EYAIKPMNCPFHVLIFMNLLQKYSSKVKLPFKIFETGTVHRYEIAGALRGLLRVRAF 159

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK----------LSTRPEKRVG 436
           TQDDAH+F  +E +    +++  ++  +Y+   +  +  +           S   E+ +G
Sbjct: 160 TQDDAHLFSPEEHVEASLMEVFEMMKDVYEKLFYIPVTSETVKLRLSLSDKSKIGEEFMG 219

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
              +W+ AE  +  V + +K   +  I      GE AFYGPK + ++ +  G++WQ GT 
Sbjct: 220 EPEMWEFAEEKLFKVAEEVKR--KYGIEFFAEEGEAAFYGPKLDVVVYEEGGKEWQIGTA 277

Query: 497 QVDFNLPSRFNAFYV--NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQ 554
           Q DFNLP RF    +   +H    +  MIHRA+ GS+ERF+GI +E FKG LP  L+P+Q
Sbjct: 278 QFDFNLPKRFKLHELIKETHGLDANLYMIHRALLGSLERFLGIYLEMFKGRLPFSLAPLQ 337

Query: 555 AIVTTITSSAVEYAQ-------EIANLLKSHHLSIETDFRNET-INYKIREHS-IKKIPI 605
            +V  IT+   E  +       ++ N LK + + + +    +T ++  +R+     K P+
Sbjct: 338 VLVIEITTGNEEVDKKIKELSSKVVNSLKENEIRVASLTSTKTHLSRDVRKVESTVKPPL 397

Query: 606 IIICGDKEASERSIGIRRFG----STTTQKVSLLDAIPILTK 643
           I+  G +EA E ++  R +          K+   + + ++ +
Sbjct: 398 ILYIGGREAEESAVVARPYDHNKRRREQMKLKADEVLKVIEE 439


>gi|88602298|ref|YP_502476.1| threonyl-tRNA synthetase [Methanospirillum hungatei JF-1]
 gi|121729157|sp|Q2FPK3|SYT_METHJ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|88187760|gb|ABD40757.1| Ser-tRNA(Thr) hydrolase [Methanospirillum hungatei JF-1]
          Length = 610

 Score =  236 bits (602), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 90/470 (19%), Positives = 172/470 (36%), Gaps = 31/470 (6%)

Query: 189 RSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRK 248
            S   VK   K ++        +     +      +        +    +    +  H  
Sbjct: 138 PSEDAVKPEKKHIEHKFFVLTPEGTIHDVQEYMDDSPFAALIKKEIGTAVPVGGEPVHVD 197

Query: 249 LAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQVLDQHLWQ 306
           L R  +          G + W  +G  +   L  Y +   +      + TP + D     
Sbjct: 198 LMRSKEFVDYEPVSDVGHLRWLPRGKLVRDLLADYALSLVLDYGASPVETPVMYDLADKA 257

Query: 307 QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFG 366
              H D +    +  K  +      R   L+   C G          S   LP+++ E  
Sbjct: 258 IFEHADKFGERQYRFKSGN------RNMMLRFAACFGMFTTMRSMHISPNHLPMKMYELS 311

Query: 367 SV-YRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIM 424
           +  +R+E  G + GL R+R FT  D H  C   E       +   +     +DFG + + 
Sbjct: 312 TYSFRHEQKGEVIGLKRLRAFTMPDMHSLCKDLENALTCFEEQLAIGWKTGRDFGTQLVA 371

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           V           ++  + + E  +K ++          I    L     ++  K +    
Sbjct: 372 VFRC--------TEEFYSEYEGWIKKIVKDSGVP----ILIETLSDRVHYWIAKIDLAAI 419

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           D   R  +  T+Q+D     RF   Y  +   + +P ++H +  GS+ER    ++EN   
Sbjct: 420 DGQNRPIENPTVQIDVESSKRFGIKYHLADGTEVYPPILHCSPTGSVERVFCAILENTVN 479

Query: 545 ----NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
               +LP WL+P Q  +  +T + + YA++IA  L    +  + D R++++N KIR   +
Sbjct: 480 QKVAHLPTWLTPTQVRIIPVTDNHLGYAKDIAEKLTKARIRADIDDRDDSLNKKIRAAGM 539

Query: 601 KKIPIIIICGDKEASER--SIGIRRFGSTTTQKV---SLLDAIPILTKES 645
             +  +I+ GD E +    ++ +R        +    +    I ++ KE+
Sbjct: 540 DWVSYVIVVGDSEMNSGNLTVTVRSESEPNKPQKITCTAEKLIEMIGKET 589


>gi|41614972|ref|NP_963470.1| threonyl-tRNA synthetase [Nanoarchaeum equitans Kin4-M]
 gi|73919808|sp|Q74MP3|SYT_NANEQ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|40068696|gb|AAR39031.1| NEQ177 [Nanoarchaeum equitans Kin4-M]
          Length = 633

 Score =  236 bits (601), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 98/426 (23%), Positives = 176/426 (41%), Gaps = 25/426 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISY--- 282
             +  L +     EE EK     +A++           G + +      +   +  Y   
Sbjct: 202 FEKMVLKEVFSEGEEIEKNPLNDVAKKFGFEWEPLSDYGHMRYKPYAALMVDLVNDYSIK 261

Query: 283 MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
           + +++      +    + D      + H   +   M+ V+       D   F L+   C 
Sbjct: 262 IAKELPFPVFIVKGTNMFDLKQGPVAEHAKLFGERMYEVQ------SDKSVFVLRYAACF 315

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMF 401
              A+      SY+ +P  + E    YR E  G +    R+R F   D HVF    ++  
Sbjct: 316 QQFAIAKDLTLSYKNVPFGMLEVADSYRFEQPGEVVLAFRLRKFYMPDLHVFTKDLDEAV 375

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            + L +H  I+   K  G +  +          V S   ++  + I++ +   +K     
Sbjct: 376 EQFLNMHKKIMEEIKKIGRDYEL-------LINVASFEDYEKYKYIIEQIYKDVKKPLLL 428

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
            I       +  ++    EY + D +GR  + GT Q+D +   RF   Y++    + H +
Sbjct: 429 AI---YPKSDQRYWIINIEYHIIDVLGRPREIGTTQIDLHNSKRFGIKYIDKDGSEKHVI 485

Query: 522 MIHRAVFGSIERFIGIMIEN----FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKS 577
           ++H A+ GSIER+I  + +      K  LP W+SP+Q  V  ++   +EYA++IA  L+S
Sbjct: 486 ILHNAILGSIERYIYALFDTALRKEKPVLPFWISPVQVRVIPVSEKYLEYAEQIAKELES 545

Query: 578 HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
               +E D R+ET+N KI++     +P II+ G+KE     I +R        + SL D 
Sbjct: 546 K-FRVELDDRDETLNKKIKDAESLWVPYIIVIGEKEIKNNKITVRDRYENKVYETSLEDL 604

Query: 638 IPILTK 643
           I  + +
Sbjct: 605 ISKMEE 610


>gi|12224878|emb|CAC21664.1| hypothetical protein [Homo sapiens]
          Length = 235

 Score =  235 bits (600), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 82/228 (35%), Positives = 120/228 (52%), Gaps = 9/228 (3%)

Query: 428 STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAI 487
           STRP   +G   LWD AE ++K  L              +  G+GAFYGPK +  L DA+
Sbjct: 12  STRPSGFLGDPCLWDQAEQVLKQALKEFGEPWD------LNSGDGAFYGPKIDVHLHDAL 65

Query: 488 GRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           GR  QCGTIQ+DF LP RF+  Y         PV+IHRAV GS+ER +G++ E+  G  P
Sbjct: 66  GRPHQCGTIQLDFQLPLRFDLQYKGQAGALERPVLIHRAVLGSVERLLGVLAESCGGKWP 125

Query: 548 LWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FRNETINYKIREHSIKKIPII 606
           LWLSP Q +V  + S   EYA+E    L++  L  + D     T++ +IR   +      
Sbjct: 126 LWLSPFQVVVIPVGSEQEEYAKEAQQSLRAAGLVSDLDADSGLTLSRRIRRAQLAHYNFQ 185

Query: 607 IICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK--ESLPPDCQK 652
            + G KE S+R++ IR   +    +  L +A+  L +   +  P+ ++
Sbjct: 186 FVVGQKEQSKRTVNIRTRDNRRLGEWDLPEAVQRLVELQNTRVPNAEE 233


>gi|330861019|emb|CBX71291.1| hypothetical protein YEW_JY42990 [Yersinia enterocolitica W22703]
          Length = 195

 Score =  235 bits (598), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 75/178 (42%), Positives = 113/178 (63%)

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
           +  GEGAFYGPK E+ L D + R WQCGT+Q+DF+LP R +A Y+  ++++  PVMIHRA
Sbjct: 7   ISPGEGAFYGPKIEFTLHDCLDRAWQCGTVQLDFSLPGRLSASYIGENNDRQVPVMIHRA 66

Query: 527 VFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF 586
           + GS+ERFIGI+ E + G  P WL+P+Q +V  IT S  +Y Q++   L+   +  + D 
Sbjct: 67  ILGSMERFIGILTEEYAGFFPTWLAPVQVVVMNITDSQSDYVQQVTKKLQDAGIRAKADL 126

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           RNE I +KIREH+++++P +++CGDKE     I +R         + +   +  L  E
Sbjct: 127 RNEKIGFKIREHTLRRVPYMLVCGDKEVESGKIAVRTRRGKDLGSLDVNVVVDQLLAE 184


>gi|224178769|ref|XP_002199495.1| PREDICTED: hypothetical protein, partial [Taeniopygia guttata]
          Length = 333

 Score =  235 bits (598), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 119/407 (29%), Positives = 185/407 (45%), Gaps = 77/407 (18%)

Query: 42  AINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII 100
            +NG++ DL  P+  + ++E++T ++  + AV  HS AHI+ EA++  +    +  GP I
Sbjct: 2   KVNGELWDLDRPLEGDCTLELLTFDNEEAKAVYWHSSAHILGEAMEGYFGGC-LCYGPPI 60

Query: 101 EDGFYYDFDKE-QPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKV 159
           E+GF+YD   E +  SS E   +E + + II     F +  +  E   ++F+  K  +K 
Sbjct: 61  ENGFHYDMYIEDRSVSSTEFPLLENRCKNIIKEKQAFERLEVKKEILLDMFKYNK--FKC 118

Query: 160 EILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSR 219
            IL         T+YR G   DLC+GPHVR TG++K   K++K +  YW G S+   L R
Sbjct: 119 RILNEKVKTPTTTVYRCGPLIDLCKGPHVRHTGKIK-ALKIIKSSSTYWEGKSDMETLQR 177

Query: 220 IYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTL 279
           IYG ++                                             K  K ++ +
Sbjct: 178 IYGISFPDN------------------------------------------KMMKEWEKI 195

Query: 280 ISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPM 339
               + +      ++    V   + ++  G +                            
Sbjct: 196 QEEAKNRDHRKIGKVYYSPVYFFYNYKDKGRFFHV------------------------- 230

Query: 340 NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQ 399
                  +F H  +S+RELP+RLA+FG ++RNE SG+L GL RVR F QDDAH+FCT EQ
Sbjct: 231 ---SFSLMFAHRPRSWRELPLRLADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCTMEQ 287

Query: 400 MFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
           +  E     + + S+Y  FGF   +  LSTRPE  +G   +WD AE 
Sbjct: 288 IEEEIKDCLDFLKSVYAVFGFTFQLH-LSTRPENYLGDLEIWDHAEK 333


>gi|56966069|pdb|1TJE|A Chain A, Crystal Structure Of The Editing Domain Of Threonyl-Trna
           Synthetase
 gi|56966071|pdb|1TKE|A Chain A, Crystal Structure Of The Editing Domain Of Threonyl-Trna
           Synthetase Complexed With Serine
 gi|56966072|pdb|1TKG|A Chain A, Crystal Structure Of The Editing Domain Of Threonyl-Trna
           Synthetase Complexed With An Analog Of Seryladenylate
 gi|56966073|pdb|1TKY|A Chain A, Crystal Structure Of The Editing Domain Of Threonyl-Trna
           Synthetase Complexed With Seryl-3'-Aminoadenosine
          Length = 224

 Score =  235 bits (598), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 97/228 (42%), Positives = 144/228 (63%), Gaps = 6/228 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D  D +  +  +
Sbjct: 1   MPV---ITLPDGSQRHYDHAVSPMDVALDIGPGLAKACIAGRVNGELVDACDLIENDAQL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L +IRHSCAH++  A++ +WP  ++AIGP+I++GFYYD D ++  + +++
Sbjct: 58  SIITAKDEEGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVIDNGFYYDVDLDRTLTQEDV 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
             +EK+M E+  ++   +K+ +S  +ARE F ++ E+YKV IL E+I   +   LY   E
Sbjct: 118 EALEKRMHELAEKNYDVIKKKVSWHEARETFANRGESYKVSILDENIAHDDKPGLYFHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWN 226
           + D+CRGPHV +      F KLMK AGAYWRGDSN  ML RIYGTAW 
Sbjct: 178 YVDMCRGPHVPNMRFCHHF-KLMKTAGAYWRGDSNNKMLQRIYGTAWA 224


>gi|167422237|ref|ZP_02313990.1| threonyl-tRNA synthetase (Threonine--tRNA ligase)(ThrRS) [Yersinia
           pestis biovar Orientalis str. MG05-1020]
 gi|166958743|gb|EDR55764.1| threonyl-tRNA synthetase (Threonine--tRNA ligase)(ThrRS) [Yersinia
           pestis biovar Orientalis str. MG05-1020]
          Length = 219

 Score =  233 bits (594), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 93/223 (41%), Positives = 140/223 (62%), Gaps = 6/223 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D SD +  +  +
Sbjct: 1   MPV---ITLPDGSQRHYDHAVSVLDVALDIGPGLAKACIAGRVNGELVDASDLIESDAQL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L ++RHSCAH++  A++ +WP+ ++AIGP+I++GFYYD D E   + ++L
Sbjct: 58  AIITAKDAEGLEILRHSCAHLLGHAIKQLWPDTKMAIGPVIDNGFYYDVDIEHTLTQEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGE 178
           A +EK+M E+  +D   +K+ +S ++AR+ F ++ E YKV IL E+I   +   LY   E
Sbjct: 118 ALLEKRMHELADKDYDVIKKKVSWQEARDTFAARGEDYKVAILDENISRDDRPGLYHHEE 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIY 221
           + D+CRGPHV +      F KL K +GAYWRGDS   ML RIY
Sbjct: 178 YVDMCRGPHVPNMRFCHHF-KLQKTSGAYWRGDSKNKMLQRIY 219


>gi|56295619|emb|CAH04860.1| partial threonyl-tRNA synthetase (HrrS) [uncultured archaeon]
          Length = 478

 Score =  233 bits (593), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 87/415 (20%), Positives = 165/415 (39%), Gaps = 28/415 (6%)

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDY--EE 293
                 E    + + +   + +     SG   ++ KG+ IFQ L  +      + +   +
Sbjct: 62  KRPPGIEPPSVKIMQQHELVGYEPSSDSGNFRFYPKGYLIFQLLHDWANEIAVNRFKALQ 121

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           I++P +      Q      ++    ++V+  D      R F L+     G   +      
Sbjct: 122 IDSPLLYAWDDPQIREQAGTFHERHYSVRPPDSD----REFILRFAGDFGLFKIMKDATI 177

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLII 412
           SYR LP+R+ EF   +R E SG L GL R+R F   D H FC   E+ + E  +++    
Sbjct: 178 SYRNLPLRMYEFSKSFRYERSGELSGLKRLRAFHMPDIHCFCRDMEEGWTEYQELYRNYS 237

Query: 413 SIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
            +    G E  +V              + +   N  +  +  +   S       VL    
Sbjct: 238 DLADASGVEYAIVFR------------IVESFYNENRSRIVDLVKYSNQPAFIEVLSEAK 285

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
            ++  K E+   D+     Q  T+Q+D      +   Y +   +K   ++ H ++ GSIE
Sbjct: 286 HYWAVKNEFQGVDSTRGCIQLSTVQLDVKDAQVYGIDYTDRDGKKKGCIICHSSI-GSIE 344

Query: 533 RFIGIMIEN----FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRN 588
           R+   ++E      +  LP+WLSP Q  +  ++   +EY +     L    +  + D  +
Sbjct: 345 RWYYSLLEEALKKEQPTLPVWLSPTQVRIIPVSEKQLEYCR----YLDIDGVRYDVDDSD 400

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           ET+  KI + S + IP + + GD+EA    + +    +     ++  +    + +
Sbjct: 401 ETLAKKIAKASTEWIPYVAVVGDREAESGVLSVSIRETGKRVTMTREELAQEVRR 455


>gi|124027839|ref|YP_001013159.1| threonyl-tRNA synthetase [Hyperthermus butylicus DSM 5456]
 gi|166223348|sp|A2BLF3|SYT_HYPBU RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|123978533|gb|ABM80814.1| Threonyl-tRNA synthetase [Hyperthermus butylicus DSM 5456]
          Length = 625

 Score =  232 bits (592), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 87/488 (17%), Positives = 187/488 (38%), Gaps = 39/488 (7%)

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVA--GAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
           E+   C G  +    +  +     +V     Y+       + S        + +      
Sbjct: 125 EFELHCHGHPLSELSRNYEAKTTARVEVKKKYYVLTPEGEVYSPEEFLEKASPEFRAVIE 184

Query: 236 YFLEESE----KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR---RKIK 288
                 E    +    KL  +           G + +      + + +  Y     R + 
Sbjct: 185 KEALGKEIGGVENPVNKLCAKFGFEWEPLSDYGHMRYEPHATLMIEAVGEYAWILARSLT 244

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
               ++    + D        H   +   ++ +        D +   ++   C    ++ 
Sbjct: 245 IPVLKVKGTNMFDLAEKPVYEHAALFGDRLYEL------WADKKHLVMRYAACHQQFSML 298

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKI 407
              + SYR+LP+ + E    YR E SG +    R+R F   D H+     E+      ++
Sbjct: 299 KDYVLSYRDLPLGMFEIADSYRLEQSGEVTLCFRLRRFYMPDLHILARSVEEAVKIAEEL 358

Query: 408 HNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGV 467
             +I    +  G     V           ++  W++  N++   L+ ++   +  +   V
Sbjct: 359 QKIIHREAEKLGQTYYAVYNV--------TEDFWEEKRNLL---LELVRRDGKPAL-ITV 406

Query: 468 LLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAV 527
                 ++    EY + D+ GR  +  T Q D     RF   YV+ ++++ +PV+IH A+
Sbjct: 407 YPAGIYYWVVNVEYHIVDSAGRPREIATFQFDVGNAKRFGIRYVDENNKEHYPVIIHTAL 466

Query: 528 FGSIERFIGIMIE--------NFKGNLPLWLSPIQAIVTTITSS---AVEYAQEIANLLK 576
            GSIER+I ++ +             +P WL+PIQ  +  +  S    + +A+++A+LL+
Sbjct: 467 IGSIERYIYMVFDAAVKMERRGQTPYIPTWLAPIQVRLIPVNPSSEQQLSHAEKVASLLE 526

Query: 577 SHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
            H + ++ D R  ++  +IR+ + + IP I + GD+E    ++ +    +     V   +
Sbjct: 527 RHLIRVDIDDRQLSLGRRIRDAAREWIPYIAVIGDREVETGTVNVTIRRTNDRVAVKPEE 586

Query: 637 AIPILTKE 644
            + ++ K+
Sbjct: 587 LLEMVLKD 594


>gi|226321240|ref|ZP_03796773.1| Threonyl-tRNA synthetase [Borrelia burgdorferi 29805]
 gi|226233369|gb|EEH32117.1| Threonyl-tRNA synthetase [Borrelia burgdorferi 29805]
          Length = 231

 Score =  232 bits (591), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 85/228 (37%), Positives = 134/228 (58%), Gaps = 6/228 (2%)

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           ++  FGF      LST+P+K VG+D+ W+ +  +++  L   +      +   +  G GA
Sbjct: 1   MWSKFGFSNPKAYLSTKPDKSVGNDSDWEMSLKVLEETLSDFE------VPYEIDKGGGA 54

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FYGPK +  + D++ R+WQ  TIQ DFNLP RFN  Y     ++  P MIHRA+ GSIER
Sbjct: 55  FYGPKIDLKIVDSLEREWQMSTIQFDFNLPERFNMTYTAEDGKEKRPFMIHRALLGSIER 114

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           F GI++E++ G  PLWLSP+Q ++  + +   +YA ++ N  K+  + I+ D  +  +N 
Sbjct: 115 FFGILVEHYGGAFPLWLSPVQVVIIPVNNIVEDYAIKVFNKFKNEGIRIKLDNSSSRMNA 174

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           KIRE+  KKIP + I G++EA+E  I IR   +     + L +A+  +
Sbjct: 175 KIREYQAKKIPYMFIIGEREATEERISIRTRTNEQINGIKLDEALKFI 222


>gi|254692873|ref|NP_001157091.1| threonyl-tRNA synthetase, mitochondrial isoform 4 [Mus musculus]
 gi|74218920|dbj|BAE37840.1| unnamed protein product [Mus musculus]
          Length = 423

 Score =  229 bits (584), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 91/286 (31%), Positives = 149/286 (52%), Gaps = 8/286 (2%)

Query: 5   IKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           IK++ P+G  +     + T   +A  IS +LA  AVA  +NG++ DL  P+  +  +  +
Sbjct: 66  IKISLPEGQKVDAVAWNTTPYQLAHQISVTLADTAVAAEVNGELYDLDRPLETDCHLRFL 125

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD--KEQPFSSDELA 120
           T + P   AV  HS AH++  A +       +  GP  E GFY+DF   KE+   S EL 
Sbjct: 126 TFDSPEGKAVFWHSSAHVLGAAAEQQL-GAVLCRGPSTESGFYHDFFLGKERTVRSAELP 184

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            +E+  QE+IA   PF +   S ++ R+LF+     +K+ ++E        T+Y  G   
Sbjct: 185 ILERICQELIAAAQPFRRLEASRDQLRQLFKDNH--FKLHLIEEKVTGPTATVYGCGMSV 242

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DLCRGPH+R TGQ+    KL+  + A WR       L R+ G ++   + L  +    E 
Sbjct: 243 DLCRGPHLRHTGQIG-ALKLLTNSSALWRSLGAPETLQRVSGISFPKVELLRNWEARREA 301

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +E RDHR++ +E +LF   E   G  F+  +G +++  L++++R +
Sbjct: 302 AELRDHRRIGKEQELFFFHELSPGSCFFLPRGTRVYNALVAFIRLE 347



 Score = 53.2 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/85 (31%), Positives = 36/85 (42%), Gaps = 10/85 (11%)

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
           F   E     CL        +Y   GF   +  LSTRP   +G   LWD AE +++  L+
Sbjct: 343 FIRLEAEIQGCLDFL---RCVYSVLGFSFHLA-LSTRPPGFLGEPRLWDQAEQVLQQALE 398

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPK 478
                        +  G+GAFYGPK
Sbjct: 399 KFGEPWD------LNPGDGAFYGPK 417


>gi|38048079|gb|AAR09942.1| similar to Drosophila melanogaster CG5353 [Drosophila yakuba]
          Length = 205

 Score =  228 bits (582), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 100/212 (47%), Positives = 134/212 (63%), Gaps = 7/212 (3%)

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           ALKPMNCPGH  +F++  +S+RELP+R+A+FG ++RNE SG+L GL RVR F QDDAH+F
Sbjct: 1   ALKPMNCPGHCLIFDNRNRSWRELPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIF 60

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDT 454
           CT EQ+ +E       +  +Y  FGF   +V LSTRP+  +G    W+ AE  +   L+ 
Sbjct: 61  CTPEQIKSEMKGCLEFLHHVYTIFGFSFQLV-LSTRPDNYLGELEQWNAAEKALAESLNE 119

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH 514
                ++        G+GAFYGPK +  + DA+ R  QC TIQ+DF LP RFN  Y+   
Sbjct: 120 FGMPWKE------NPGDGAFYGPKIDITIMDALKRAHQCATIQLDFQLPIRFNLSYIADD 173

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIENFKGNL 546
            EK  PV+IHRA+ GS+ER I I+ ENF G  
Sbjct: 174 GEKKRPVIIHRAILGSVERMIAILTENFAGKW 205


>gi|225629811|ref|ZP_03787740.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Muscidifurax
           uniraptor]
 gi|225591334|gb|EEH12445.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Muscidifurax
           uniraptor]
          Length = 260

 Score =  228 bits (582), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 127/263 (48%), Positives = 179/263 (68%), Gaps = 6/263 (2%)

Query: 4   DIKLTF-PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
            +++TF  +  +K +     G D+ +       K+A+A  +NG++ DLS  +  +  IE+
Sbjct: 1   MVRITFSTEQKVKEYSGKVIGFDILQ---PDALKEAIAFKVNGELHDLSREIEADAEIEV 57

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           I   D   L +IRH  AHIMA+AV+ ++P  Q+ IGP I+DGFYYDF   + F++D+L  
Sbjct: 58  IQLSDEAGLDIIRHDAAHIMAQAVKELFPNTQITIGPTIQDGFYYDFATGRTFTTDDLTA 117

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IEKKM+EI+  +  F+++  + ++A + F    E YKV+I+ SIP  EN+T+YRQG++ D
Sbjct: 118 IEKKMKEIVKSNHRFVREVWTRKQAIDFFSGIGEKYKVDIISSIPEGENLTVYRQGDFID 177

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           LCRGPH  STG+VK F KLMKVAGAYWRGD+  PML RIYGTAW  + EL  YL  L+E+
Sbjct: 178 LCRGPHSPSTGRVKAF-KLMKVAGAYWRGDAKGPMLQRIYGTAWRNKDELNAYLECLKEA 236

Query: 242 EKRDHRKLAREMDLFHIAEDGSG 264
           EKRDHRK+A++MDLFHI E+  G
Sbjct: 237 EKRDHRKIAKDMDLFHIQEEAVG 259


>gi|221118771|ref|XP_002157095.1| PREDICTED: similar to predicted protein, partial [Hydra
           magnipapillata]
          Length = 204

 Score =  228 bits (580), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 70/198 (35%), Positives = 111/198 (56%), Gaps = 8/198 (4%)

Query: 447 IMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF 506
            ++  L+   +  +      +  G+GAFYGPK +  ++DA+ R  QC TIQ+DF LP RF
Sbjct: 1   QLESSLNDFGDPWE------LNPGDGAFYGPKIDIQIRDALRRYHQCATIQLDFQLPERF 54

Query: 507 NAFYVNSHSE-KCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAV 565
           N  YV+   + +  PV+IHRA+ GS+ER I I+ EN+ G  P WLSPIQA+V  +++   
Sbjct: 55  NLTYVSGEGDDQKRPVIIHRAILGSVERMIAILTENYGGKWPFWLSPIQAVVIPVSNKFD 114

Query: 566 EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
           EYAQ++   L+   + +  D   ET+N KIR   +     I++ GDKE +  ++ +R   
Sbjct: 115 EYAQKVHRFLQDFRVDVNLDA-GETLNKKIRNAQLMHYNFILVVGDKEMTSNTVNVRTRD 173

Query: 626 STTTQKVSLLDAIPILTK 643
           +    + SL   +    +
Sbjct: 174 NKVHGEKSLETVLARFNE 191


>gi|149001904|ref|ZP_01826858.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
 gi|147759713|gb|EDK66703.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
          Length = 223

 Score =  226 bits (577), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 92/208 (44%), Positives = 146/208 (70%), Gaps = 6/208 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +TFPDG+++ F    T  ++A+SIS SLAKKA+A   NGK+ D +  +  +GSIEI+
Sbjct: 1   MINITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGSIEIV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQ 121
           TP+   +L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D      S+++L +
Sbjct: 61  TPDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNTAGQISNEDLPR 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKE-NVTLYRQGEWF 180
           IE++MQ+I+  + P +++ ++ ++ARE+F+   + YK+E++E     E  +T+YRQGE+ 
Sbjct: 121 IEEEMQKIVKENFPSIREEVTKDEAREIFK--NDPYKLELIEEHSEDEGGLTIYRQGEYV 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYW 208
           DLCRGPHV STG+++ F  L  VAGAYW
Sbjct: 179 DLCRGPHVPSTGRIQIFHLLH-VAGAYW 205


>gi|213580910|ref|ZP_03362736.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
          Length = 234

 Score =  225 bits (574), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 129/241 (53%), Positives = 175/241 (72%), Gaps = 8/241 (3%)

Query: 173 LYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELT 232
           +Y   E+ D+CRGPHV +      F KLMK AGAYWRGDSN  ML RIYGTAW  ++ L 
Sbjct: 1   MYHHEEYVDMCRGPHVPNMRFCHHF-KLMKTAGAYWRGDSNNKMLQRIYGTAWADKKALN 59

Query: 233 QYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DY 291
            YL  LEE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW IF+ L  ++R K+K+  Y
Sbjct: 60  AYLQRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQY 119

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           +E+  P ++D+ LW+++GHWD+Y+  MF       T  + R + +KPMNCPGHV +FN G
Sbjct: 120 QEVKGPFMMDRVLWEKTGHWDNYKDAMFT------TSSENREYCIKPMNCPGHVQIFNQG 173

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI 411
           LKSYR+LP+R+AEFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT+EQ+ +E      ++
Sbjct: 174 LKSYRDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQIRDEVNACIRMV 233

Query: 412 I 412
            
Sbjct: 234 Y 234


>gi|302348085|ref|YP_003815723.1| threonyl-tRNA synthetase [Acidilobus saccharovorans 345-15]
 gi|302328497|gb|ADL18692.1| threonyl-tRNA synthetase [Acidilobus saccharovorans 345-15]
          Length = 467

 Score =  225 bits (573), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 131/450 (29%), Positives = 213/450 (47%), Gaps = 55/450 (12%)

Query: 240 ESEKRDHRKLAREMDLF-----HIAEDGSGVIFWHRKGWKIFQTLISYMRR--------- 285
            S+++DH   A+++D+       I+  G+ V      G  +F     Y+R          
Sbjct: 1   MSQEKDHMDYAQDLDIAARPDLTISVLGTDVGSLLGHGIPLFTIGGGYLRSALSQILVNF 60

Query: 286 KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
             +  Y    TP V    L++ SGH   Y+ NMF  +       + + +A+KPMNCP H+
Sbjct: 61  HARRGYYIAETPIVSSGALFELSGHMGYYKQNMFVFQV------EGKEYAVKPMNCPFHI 114

Query: 346 AVFNHGLKSYRE---LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN 402
            +F   +  +R    LP ++ E G V+R EPSGS++GL+R R FTQDDAH+    +   N
Sbjct: 115 LIFLSEVTRHRNKVSLPFKVFEVGRVHRLEPSGSVYGLLRSRSFTQDDAHIITLGKDAVN 174

Query: 403 ECLKIHNLIISIYKDFGFEKIMV-----KLSTRPEKRVGSDAL-----WDDAENIMKGVL 452
               + + +I+IY      ++       +LS   + ++G+D +     W+ AE+ ++G L
Sbjct: 175 VITSVFDEMITIYSKLFNVEMNPSTVTLRLSLSDKSKIGTDFMGTKDEWEKAEDFLRGAL 234

Query: 453 DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAI---GRDWQCGTIQVDFNLPSRFNAF 509
           + I  +S+  +      GE AFYGPK + ++K      G++WQ GTIQ DFNLP RF  F
Sbjct: 235 EAI--ASKYGLRYTAAEGEAAFYGPKIDVLVKLGSGQEGKEWQLGTIQFDFNLPRRFKIF 292

Query: 510 YVNSHSEKCHPV-MIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTI------TS 562
                      V +IHRA+ GSIERF+G  ++N+KG LP  L+P+Q  V  I        
Sbjct: 293 DAAKELYGSEDVYIIHRALIGSIERFLGAYLDNYKGRLPFVLAPLQFAVLAIKAGDEFDK 352

Query: 563 SAVEYAQEIANLLKSHHLSIETDFRNET-INYKIREHSI-KKIPIIIICGDKEASERSIG 620
              ++A  +   L +            T ++  +R      K   I+  G +E  + S+ 
Sbjct: 353 RVEDFALSLHRALVAKGFRSGYGETTRTSLSGDVRLLESGPKPAAIVYVGRREIEKGSVT 412

Query: 621 IRRFGSTTTQKVSL--------LDAIPILT 642
           +  +   + ++ S+         DAI  L 
Sbjct: 413 VSIYEGGSRRQTSVNASDPLGAADAIESLA 442


>gi|329889349|ref|ZP_08267692.1| prolyl-tRNA synthetase [Brevundimonas diminuta ATCC 11568]
 gi|328844650|gb|EGF94214.1| prolyl-tRNA synthetase [Brevundimonas diminuta ATCC 11568]
          Length = 438

 Score =  225 bits (572), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 83/444 (18%), Positives = 161/444 (36%), Gaps = 35/444 (7%)

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLF--HIAEDGSGVIFWHRKGWKIFQTLISYMR-R 285
             L++Y   + +    D + ++ ++ L    I ++ +G+  W   G ++ + +   +R  
Sbjct: 1   MRLSRYFLPILKEAPSDAQIVSHQLMLRAGMIKQEAAGIYAWLPLGLRVLRKIEGIVRDE 60

Query: 286 KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++K    E+  P +    LW++SG +D+Y   M  +     T +  R     P N     
Sbjct: 61  QVKAGAVELLMPTLQLADLWRESGRYDAYGPEMLRI-----TDRHERELLYGPTNEEMVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +F   +KSY+ LP+ L      +R+E      G+MR R F   DA+ F   E       
Sbjct: 116 DIFRAYVKSYKALPLNLFHIQWKFRDERRPRF-GVMRGREFLMKDAYSFDLDEASARIAY 174

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV-----LDTIKNSS 459
           K +    ++ +   G + + ++  T P     S      AE     V     L  +    
Sbjct: 175 KRMFAAYLNTFARLGLKAVPMRADTGPIGGDLSHEFIVLAETGESEVFCDRKLVEMAAPG 234

Query: 460 QD---RINTGVLLGEGAFYGPKFE------YILKDAIGRDWQCGTI---QVDFNLPSRFN 507
            +       GV     A Y    E      +  + A G       I    + +       
Sbjct: 235 HNLSVEQLEGVFNERTALYAATEEMHDAAQFETQTAEGDRLSARGIEVGHIFYFGTKYSA 294

Query: 508 AFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN----LPLWLSPIQAIVTTI-- 560
           A              +H   +G  + R +G +IE          P  ++P   +V  +  
Sbjct: 295 AMKAKVAGPNGQDTEVHMGSYGVGVSRLLGAIIEASHDEGGIIWPDSVAPFDVVVINLRA 354

Query: 561 -TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSI 619
              +     ++    L++    +  D  +E    K     +  +P  +  G K  ++  +
Sbjct: 355 SDEAVSAACEDAVAKLEALGKDVLYDDTDERPGGKFATADLIGVPWQLTIGPKGLADGVV 414

Query: 620 GIRRFGSTTTQKVSLLDAIPILTK 643
            ++R  +   Q +SL  A+ +LTK
Sbjct: 415 ELKRRATGEKQSLSLDAALELLTK 438


>gi|296110107|ref|YP_003617056.1| threonyl-tRNA synthetase [Methanocaldococcus infernus ME]
 gi|295434921|gb|ADG14092.1| threonyl-tRNA synthetase [Methanocaldococcus infernus ME]
          Length = 610

 Score =  225 bits (572), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 91/418 (21%), Positives = 171/418 (40%), Gaps = 27/418 (6%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIF-WHRKGWKIFQTLISYMRR-KIKDDYEEI 294
                ++  H KL +E ++    E      F W+ KG  I   +  Y+    +      +
Sbjct: 186 RESLEKEPKHVKLIKEKEICSNEEASDLGHFRWYPKGKLIRDLIADYVYYLVLSHGAMPV 245

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
            TP + D +      H D +    +  +  +      +   L+   C G   +       
Sbjct: 246 ETPVMYDLNNKAIKEHADKFGERQYRFRMGN------KELMLRFAACFGQFMIKKDMYLL 299

Query: 355 YRELPVRLAEFGSV-YRNEPSGSLHGLMRVRGFTQDDAHVFCT-KEQMFNECLKIHNLII 412
            + LP++L E  +  +R E SG L GL R+R FT  D H  C   EQ   E  K   + +
Sbjct: 300 PKYLPLKLYELSTYSFRYEQSGELVGLKRLRAFTMPDMHTVCLNLEQAMEEFEKQFWMCL 359

Query: 413 SIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
              +D   +            R   D   +  +  ++   +  K      +   +L    
Sbjct: 360 KTGEDLELDYY-------VIFRFTKDFFEEHKDWFLRMAKEY-KERYNKDLLLEILPKRK 411

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
            ++  K +  + D++GR  +  T+Q+D     RF+        ++ +P+++H +  GSIE
Sbjct: 412 HYWVGKVDIAVIDSLGRPIENPTVQIDVESSKRFDIKVHAD--KEIYPIILHCSPTGSIE 469

Query: 533 RFIGIMIENFK--GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
           R I  ++E        P+WLSPIQ  V +++    EYA+ I   L  +++  + D R+  
Sbjct: 470 RVICALLERDMELPYFPIWLSPIQVRVISVSEKYNEYAENIVKELIKNNIRADLDDRDLR 529

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ-----KVSLLDAIPILTK 643
           +  KIRE     +P +++ G++E     + +     +T +     K+SL + I  + +
Sbjct: 530 VGKKIREAGKDWVPYVVVVGEEEVKGNKLTVTIREKSTLKEPYKVKMSLEELIKEVKE 587


>gi|288958966|ref|YP_003449307.1| prolyl-tRNA synthetase [Azospirillum sp. B510]
 gi|288911274|dbj|BAI72763.1| prolyl-tRNA synthetase [Azospirillum sp. B510]
          Length = 437

 Score =  223 bits (568), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 87/439 (19%), Positives = 160/439 (36%), Gaps = 39/439 (8%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
           +        E++   HR + R   +   +    G+  W   G+++ + +   +R +    
Sbjct: 8   MPTLKETPTEAQIVSHRLMLRAGMIRQTSA---GIYAWLPLGYRVLRKIEQIVREEQDAA 64

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
             +E+  P +    LW++SG +D Y   M  +    D     R     P N      +F 
Sbjct: 65  GAQELLMPTIQSADLWRESGRYDDYGKEMLRITDRHD-----REMLFGPTNEEMITDIFR 119

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIH 408
             +KSYR+LP+ L      +R+E      G+MR R F   DA+ F            K+ 
Sbjct: 120 SFVKSYRQLPLNLYHIQWKFRDEIRPRF-GVMRGREFLMKDAYSFDIDPAGARRSYQKMF 178

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV--------LDTIKNS-- 458
              +  +   G + I ++  T P     S      AE    GV        LD +K++  
Sbjct: 179 LAYLRTFARIGLKAIPMRADTGPIGGDLSHEFIILAETGESGVFCHKDWMTLDVLKDAPG 238

Query: 459 SQDRINTGVLLGEGAFYGPKFEYI------LKDA---IGRDWQCGTIQVDFNLPSRFNAF 509
            +D +        G  Y    E        + DA     R  + G I       S+    
Sbjct: 239 MEDDLQPFFDRVTGI-YAATDEKHDPANSPVPDADLVSARGIEVGHIFNFGTKYSKPMNA 297

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNLPLWL---SPIQAIVTTITSSAV 565
            V   + +  PV +     G   R +G +IE +   N  +W    +P    +  + S   
Sbjct: 298 VVAGPNGESIPVEMGSYGIGVS-RLMGAIIEASHDDNGIIWPDAVAPFNVGLINLKSGDA 356

Query: 566 E---YAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           E      E+   L++  L +  D R+E    K  +  +  +P  ++ G +      + ++
Sbjct: 357 ETDRVCAELYAKLEAAGLEVAYDDRDERPGAKFADMDLIGVPWQLVVGPRGLKSGVVELK 416

Query: 623 RFGSTTTQKVSLLDAIPIL 641
           R  +   +++ +  A+  L
Sbjct: 417 RRATGEKEELPVEAALAKL 435


>gi|118431208|ref|NP_147510.2| threonyl-tRNA synthetase [Aeropyrum pernix K1]
 gi|150421682|sp|Q9YDW0|SYT1_AERPE RecName: Full=Probable threonyl-tRNA synthetase 1; AltName:
           Full=Threonine--tRNA ligase 1; Short=ThrRS 1
 gi|262118516|pdb|3A32|A Chain A, Crystal Structure Of Putative Threonyl-Trna Synthetase
           Thrrs-1 From Aeropyrum Pernix
 gi|116062532|dbj|BAA79787.2| threonyl-tRNA synthetase [Aeropyrum pernix K1]
          Length = 471

 Score =  223 bits (567), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 122/404 (30%), Positives = 194/404 (48%), Gaps = 41/404 (10%)

Query: 272 GWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G  I   L   + +   +  Y  + TP +    L++ SGH + YR NM+          +
Sbjct: 48  GGPIRYALAEVLAKFHARRGYYVVETPIIASTELFKVSGHIEFYRNNMYLF------DIE 101

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRE---LPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
              FA+KPMNCP H+ +F + +  +R    LP ++ EFG V+R EPSGS++GL+RVRGFT
Sbjct: 102 GHEFAVKPMNCPYHILLFLNEVAKHRSKLPLPFKVFEFGRVHRYEPSGSIYGLLRVRGFT 161

Query: 388 QDDAHVFCTKEQMFNECLKIHN---LIISIYKDFGFEKIMVK-------LSTRPEKRVGS 437
           QDDAH+     ++ +    +     L++      G      K        S   ++ +GS
Sbjct: 162 QDDAHIIVPGGRVIDVVYDVFEEMKLVLERLFKLGVSSETFKVRLSMSDKSLIGKEFMGS 221

Query: 438 DALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL---KDAIGRDWQCG 494
              W+ AE  ++     I    +  I+   L GE AFYGPK ++I+   +  + ++WQ G
Sbjct: 222 KEEWEGAEEALREAASRINE--KYGIDIVELEGEAAFYGPKLDFIMMVEESGVSKEWQMG 279

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPV-MIHRAVFGSIERFIGIMIENFKGNLPLWLSPI 553
           TIQ DFNLP RF  + V         V +IHRA+ GSIERF+G+ +E+ +G +P  L+PI
Sbjct: 280 TIQFDFNLPRRFRLYDVVREEFGIEEVYIIHRALLGSIERFLGVYLEHRRGRMPFTLAPI 339

Query: 554 QAIVTTITS------SAVEYAQEIANLLKSHHLSIETDFRNET-INYKIREHS-IKKIPI 605
           Q  V  + +         + A  IA  L      +     ++T ++  +R      K  +
Sbjct: 340 QFAVIAVKTGGEVDREIEDLASSIAKGLLDKGFRVAVKGSSKTGLSSDVRHIESTAKPAV 399

Query: 606 IIICGDKEASERSIGIRRFGSTTTQKVSL-------LDAIPILT 642
            +  G KE  E+ + +R F   + ++  L        DA+  L 
Sbjct: 400 NVFIGAKEVREKVLDVRVFDLESMKRRRLAIAYGDAADAVENLA 443


>gi|255027300|ref|ZP_05299286.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL J2-003]
          Length = 181

 Score =  222 bits (566), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 82/181 (45%), Positives = 130/181 (71%), Gaps = 1/181 (0%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +K+TFPDG++K F    + +D+A SIS  L KKA+A  +NG++ DL  P+  +G+IEI+T
Sbjct: 1   MKITFPDGAVKEFEPGVSTADIAASISPGLKKKALAGKLNGELLDLVTPIHEDGAIEIVT 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
           P+   +L ++RHS AH+MA+A++ ++P+V+  +GP IE GFYYD D E   S + L +IE
Sbjct: 61  PDHEDALGILRHSTAHLMAQALKRLYPDVKFGVGPAIESGFYYDIDTEAVISDESLVEIE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+MQ+I+  + P  ++ +S E+A + F++  + YK+E++E+IP  E VT+Y QGE+FDLC
Sbjct: 121 KEMQKIVRENVPIEREVVSREEAIKRFKAIGDQYKLELIEAIPEDETVTIYTQGEFFDLC 180

Query: 184 R 184
           R
Sbjct: 181 R 181


>gi|92117720|ref|YP_577449.1| prolyl-tRNA synthetase [Nitrobacter hamburgensis X14]
 gi|123083656|sp|Q1QLA8|SYP_NITHX RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|91800614|gb|ABE62989.1| prolyl-tRNA synthetase [Nitrobacter hamburgensis X14]
          Length = 439

 Score =  220 bits (560), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 85/434 (19%), Positives = 158/434 (36%), Gaps = 43/434 (9%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           +E+E   HR + R   +    ++ +G+  W   G ++ + + + +R +       E+  P
Sbjct: 16  KEAEIVSHRLMLRAGMMR---QEAAGIYAWLPLGLRVLKKIEAIVREEQNRAGAIELLMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW++SG +D+Y   M  ++      +  R     P N      +F   ++SY+ 
Sbjct: 73  TLQLADLWRESGRYDAYGPEMLRIQD-----RHKRELLYGPTNEEMITEIFRSYVRSYKS 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYK 416
           LP+ L      +R+E      G+MR R F   DA+ F   E        ++    +  + 
Sbjct: 128 LPLNLYHIQWKFRDEQRPRF-GVMRGREFLMKDAYSFDIDEVGARLSYNRMFVAYLRTFA 186

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAEN------IMKGVLDTIKNSSQ---------- 460
             G + I ++  T P     S      AE       I K VLD     +           
Sbjct: 187 RMGLKAIPMRAETGPIGGDLSHEFIVLAETGESGVYIDKDVLDLPVPGTDVDYDGDLTPI 246

Query: 461 -DRINTGVLLGEGAFYGPKFEYILKDAIG---RDWQCGTIQV-DFNLPSRFNAFYVNSHS 515
             +  T     E    G ++E  + +      R  + G I            A       
Sbjct: 247 VKQWTTAYAATEDVHDGARYEREVPEERRVHTRGIEVGQIFYFGTKYSESMKALVAGPDG 306

Query: 516 EKCHPVMIHRAVFGS-IERFIGIMIENFKG----NLPLWLSPIQAIVTTITSSAVEY--- 567
            +     IH   +G  + R +G +IE          P  ++P    +  +   A +    
Sbjct: 307 VEQ---PIHGGSYGVGVSRLVGAIIEACHDDAGIKWPEAVAPFTVAILNLKQGAGDTDAA 363

Query: 568 AQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGST 627
            + +   L +  + +  D  ++    K     +  IP  ++ G K  +E  + I+R G  
Sbjct: 364 CERLYRELSAKGVDVLYDDTDQRAGAKFATADLIGIPWQVMVGPKGLAEGKVEIKRRGDG 423

Query: 628 TTQKVSLLDAIPIL 641
           T + V+L DA+  L
Sbjct: 424 TRENVALEDAVERL 437


>gi|254418115|ref|ZP_05031839.1| prolyl-tRNA synthetase [Brevundimonas sp. BAL3]
 gi|196184292|gb|EDX79268.1| prolyl-tRNA synthetase [Brevundimonas sp. BAL3]
          Length = 438

 Score =  219 bits (558), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 77/432 (17%), Positives = 155/432 (35%), Gaps = 38/432 (8%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
            +++   H+ + R      I ++ +G+  W   G ++ + +   +R + +     E+  P
Sbjct: 16  SDAQIVSHQLMLRAGM---IKQEAAGIYAWLPLGLRVLRKIEQIVREEQQRAGAVELLMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW++SG +D+Y   M  +     T +  R     P N      +F   +KSY+ 
Sbjct: 73  TLQLADLWRESGRYDAYGPEMLRI-----TDRHERELLYGPTNEEMITDIFRAYVKSYKS 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYK 416
           LP+ L      +R+E      G+MR R F   DA+ F   E    +   ++    ++ + 
Sbjct: 128 LPLNLFHIQWKFRDERRPRF-GVMRGREFLMKDAYSFDVDEASARKAYNRMFVAYLNTFA 186

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAEN-----IMKGVLDTIKNSSQDRINTG----V 467
             G + + ++  T P     S      AE           L  +     D ++      +
Sbjct: 187 RMGLKAVPMRADTGPIGGDLSHEFIVLAETGESAVFCDKALVEMPAPGAD-VDWDDLQSI 245

Query: 468 LLGEGAFYGPKFE------YILKDAIGRDWQCGTIQVDF--NLPSRFNA-FYVNSHSEKC 518
           +    A Y    E      +  + A G       I+V        +++A           
Sbjct: 246 VDQRTALYAATEEMHDEARFEAETAEGDRLSARGIEVGHIFYFGEKYSAPMKAKVAGPDG 305

Query: 519 HPVMIHRAVFGS-IERFIGIMIENFKGN----LPLWLSPIQAIVTT---ITSSAVEYAQE 570
               +H   +G  + R +G +IE          P  ++P   +V       ++     ++
Sbjct: 306 QDAEVHMGSYGVGVSRLLGAIIEASHDEGGIIWPDAVAPFDVVVINLRANDAAVSAACED 365

Query: 571 IANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
               L+     +  D  +E    K     +  +P  +  G K  ++  + ++R  +    
Sbjct: 366 AVAQLEKLGKDVLYDDTDERPGGKFATADLIGVPWQLTIGPKGLADGVVELKRRATGEKV 425

Query: 631 KVSLLDAIPILT 642
            V L +AI  LT
Sbjct: 426 SVPLAEAIERLT 437


>gi|39884|emb|CAA28636.1| unnamed protein product [Bacillus subtilis]
          Length = 180

 Score =  219 bits (558), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 71/180 (39%), Positives = 122/180 (67%), Gaps = 1/180 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M   +K+TFPDG++K F    T  D+A SIS  L KK++A  +NGK  DL  P+  +G++
Sbjct: 1   MSDMVKITFPDGAVKEFAKGTTTEDIAASISPGLKKKSLAGKLNGKEIDLRTPINEDGTV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           EIIT      L ++RHS AH++A+A++ I+ +V+  +GP+IE+GFYYD + ++  + ++L
Sbjct: 61  EIITEGSEEGLQIMRHSAAHLLAQAIKRIYKDVKFGVGPVIENGFYYDVEMDEAITPEDL 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IEK+M++I+  + P +++ +S E+A+  F    +  K+E+L++IP  E V++Y QGE+
Sbjct: 121 PKIEKEMKKIVNANLPIVRKEVSREEAKARFAEIGDDLKLELLDAIPEGETVSIYEQGEF 180


>gi|85717006|ref|ZP_01047968.1| prolyl-tRNA synthetase [Nitrobacter sp. Nb-311A]
 gi|85696130|gb|EAQ34026.1| prolyl-tRNA synthetase [Nitrobacter sp. Nb-311A]
          Length = 439

 Score =  219 bits (557), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 84/434 (19%), Positives = 159/434 (36%), Gaps = 41/434 (9%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           +E+E   HR + R   +    ++ +G+  W   G ++ + + + +R +       E+  P
Sbjct: 16  KEAEIVSHRLMLRAGMIR---QEAAGIYAWLPLGLRVLKKIEAIVREEQNRAGAIELLMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW++SG +D+Y   M  ++      +  R     P N      +F   ++SY+ 
Sbjct: 73  TLQLADLWRESGRYDAYGPEMLRIQD-----RHKRELLYGPTNEEMITEIFRGYIRSYKS 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYK 416
           LP+ L      +R+E      G+MR R F   DA+ F   E        K+    +  + 
Sbjct: 128 LPLNLYHIQWKFRDEQRPRF-GVMRGREFLMKDAYSFDIDEAGARRSYNKMFVAYLRTFA 186

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAEN------IMKGVLDTIKNSSQ---------- 460
             G + I ++  T P     S      AE       I K VLD     +           
Sbjct: 187 RMGLKAIPMRAETGPIGGDLSHEFIVLAETGESGVYIDKDVLDLPVPGTDVDYDGDLTPI 246

Query: 461 -DRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI---QVDFNLPSRFNAFYVNSHSE 516
             +        E    GP++E  + +   R      I   Q+ +      ++        
Sbjct: 247 VKQWTVAYAATEDVHDGPRYEREVPEE--RRVHTRGIEVGQIFYFGTKYSDSMKTLVTGP 304

Query: 517 KCHPVMIHRAVFGS-IERFIGIMIENFKG----NLPLWLSPIQAIVTTITSSAVEY---A 568
                 IH   +G  + R +G +IE          P  ++P +  +  +   A +     
Sbjct: 305 DGVEQPIHGGSYGVGVSRLVGAIIEACHDEGGIKWPDAVAPFRVAILNLKQGAGDTDAAC 364

Query: 569 QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
           + I   L +  + +  D  ++    K     +  IP  ++ G K  +E  + I+R    +
Sbjct: 365 ERIYRELSAKGIDVLYDDTDQRAGAKFATADLIGIPWQVMVGPKGLAEGKVEIKRREDGS 424

Query: 629 TQKVSLLDAIPILT 642
            + V+L D +  LT
Sbjct: 425 RENVALEDVVARLT 438


>gi|121728093|ref|ZP_01681130.1| threonyl-tRNA synthetase [Vibrio cholerae V52]
 gi|121629641|gb|EAX62062.1| threonyl-tRNA synthetase [Vibrio cholerae V52]
          Length = 208

 Score =  219 bits (557), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 86/206 (41%), Positives = 131/206 (63%), Gaps = 4/206 (1%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS ++F    +  +VA+SI   LAK  +A  +NG   D  D +  + S+EIIT +
Sbjct: 4   ITLPDGSQRHFDNPVSTLEVAQSIGPGLAKATIAGRVNGARVDACDLIEHDASLEIITTK 63

Query: 66  DP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  A++ ++P  ++AIGP I+ GFYYD D EQ  S ++L +IE 
Sbjct: 64  DEVDGLEIVRHSCAHLLGHALKQLYPNAKMAIGPTIDSGFYYDIDLEQSLSQEDLEKIEA 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLC 183
           +M E+       +K+ +S ++AR+ FES+ E+YK+EIL E++   +   LY   E+ D+C
Sbjct: 124 RMVELAKTKYAVVKKKVSWQEARDTFESRGESYKMEILDENVARDDRPGLYHHEEYIDMC 183

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWR 209
           RGPHV   G  + F KL+ +AGAYWR
Sbjct: 184 RGPHVPHMGFCQNF-KLLNIAGAYWR 208


>gi|222148295|ref|YP_002549252.1| prolyl-tRNA synthetase [Agrobacterium vitis S4]
 gi|221735283|gb|ACM36246.1| prolyl-tRNA synthetase [Agrobacterium vitis S4]
          Length = 498

 Score =  219 bits (557), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 84/495 (16%), Positives = 160/495 (32%), Gaps = 43/495 (8%)

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
            C      + G+         V     + D           +       L++Y   + + 
Sbjct: 12  PCYPSPPCTKGRGGFSSVCETVRRLQEKPDIRLIPHEMRLASPMEVGMRLSRYFLPILKE 71

Query: 242 EKRDHRKLAREMDLF--HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
             ++   ++  + L    I +   G+  W   G ++   + + +R++       E+  P 
Sbjct: 72  NPKEAEIVSHRLMLRTGMIRQQSQGIYSWLPLGKRVLDKVNAIIRQEQNRAGAVELLMPT 131

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG +D Y   M  +K   D     R     P N      +F   +KSY+ L
Sbjct: 132 LQSAELWQESGRYDDYGKEMLRIKDRQD-----RPMLYGPTNEEMITDIFRSYVKSYKSL 186

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKD 417
           P+ L      +R+E      G MR R F   DA+ F  TKE   +   K+    +  +  
Sbjct: 187 PLNLYHIQLKFRDEIRPRF-GTMRSREFLMKDAYSFDLTKESAIHSYNKMFAAYLRTFDR 245

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV------LDTIKNSSQDRINTG----- 466
            G   I ++  T P     S      A+     V      LD    S+    +       
Sbjct: 246 LGLRAIPMRADTGPIGGNHSHEFIILADTGESEVFCHKSFLDRAIPSADTDFDDVAGLQA 305

Query: 467 VLLGEGAFYGPKFEYILKDAIG----------RDWQCGTIQV-DFNLPSRFNAFYVNSHS 515
           +     + Y    E   + A G          R  + G I            A       
Sbjct: 306 IFDDWTSHYAATSEMHDEAAYGAMPDDAKISARGIEVGHIFYFGTKYSEPMGAKVQGPDG 365

Query: 516 EKCHPVMIHRAVFGS-IERFIGIMIENFKGN----LPLWLSPIQAIVTTITSSAVEY--- 567
           ++    ++H   +G    R +  +IE          P  ++P  AI+  + +        
Sbjct: 366 KEH---LVHMGSYGIGPTRLVPAIIEASHDENGIIWPASVAPFDAIIINMKAGDAGCDGA 422

Query: 568 AQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGST 627
              +   L      +  D  ++    K     +  +P  +I G +  +   + ++   + 
Sbjct: 423 CDTVYGALTKAGKDVLLDDTDDRAGAKFALADLIGVPYQVIVGPRSVANGEVELKNRKTG 482

Query: 628 TTQKVSLLDAIPILT 642
             + +++  AI  L 
Sbjct: 483 ERETMTIEAAINRLA 497


>gi|75676056|ref|YP_318477.1| prolyl-tRNA synthetase [Nitrobacter winogradskyi Nb-255]
 gi|114152223|sp|Q3SRG6|SYP_NITWN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|74420926|gb|ABA05125.1| Prolyl-tRNA synthetase [Nitrobacter winogradskyi Nb-255]
          Length = 439

 Score =  218 bits (556), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 86/434 (19%), Positives = 160/434 (36%), Gaps = 43/434 (9%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           +E+E   HR + R   +    ++ +G+  W   G ++ + + + +R +       E+  P
Sbjct: 16  KEAEIVSHRLMLRAGMIR---QEAAGIYAWLPLGLRVLKKIEAIVREEQNRAGAIELLMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW++SG +D+Y   M  ++      +  R     P N      +F   ++SY+ 
Sbjct: 73  TLQLADLWRESGRYDAYGPEMLRIQD-----RHKRELLYGPTNEEMITEIFRGYIRSYKS 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYK 416
           LP+ L      +R+E      G+MR R F   DA+ F   E        ++    +  + 
Sbjct: 128 LPLNLYHIQWKFRDEQRPRF-GVMRGREFLMKDAYSFDIDEAGARRSYNRMFVAYLRTFA 186

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAEN------IMKGVLDTIKNSSQ---------- 460
             G + I ++  T P     S      AE       I K VLD     ++          
Sbjct: 187 RMGLKAIPMRAETGPIGGDLSHEFIVLAETGESGVYIDKDVLDLPIPGTEVDYDGDLTPI 246

Query: 461 -DRINTGVLLGEGAFYGPKFEYILKDAIG---RDWQCGTIQV-DFNLPSRFNAFYVNSHS 515
             +  T     E    GP++E  + +      R  + G I            A    +  
Sbjct: 247 VRQWTTAYAATEDVHDGPRYEREVPEERRVHTRGIEVGQIFYFGTKYSESMKALVTGTDG 306

Query: 516 EKCHPVMIHRAVFGS-IERFIGIMIENFKG----NLPLWLSPIQAIVTTITSSA---VEY 567
            +     IH   +G  + R +G +IE          P  ++P    +  +   A    E 
Sbjct: 307 VEQ---PIHGGSYGVGVSRLVGAIIEACHDEAGIKWPEAVAPFTVAILNLKQGASDTDEA 363

Query: 568 AQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGST 627
            + I   L +  + +  D  ++    K     +   P  ++ G K  +E  + I+R G  
Sbjct: 364 CERIYRELSARGVDVLYDDTDQRAGAKFATADLIGSPWQVMVGPKGLAEGKVEIKRRGDG 423

Query: 628 TTQKVSLLDAIPIL 641
           + + V+L DA+  L
Sbjct: 424 SRENVALEDAVARL 437


>gi|258542706|ref|YP_003188139.1| prolyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01]
 gi|256633784|dbj|BAH99759.1| prolyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01]
 gi|256636843|dbj|BAI02812.1| prolyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-03]
 gi|256639896|dbj|BAI05858.1| prolyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-07]
 gi|256642952|dbj|BAI08907.1| prolyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-22]
 gi|256646007|dbj|BAI11955.1| prolyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-26]
 gi|256649060|dbj|BAI15001.1| prolyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-32]
 gi|256652047|dbj|BAI17981.1| prolyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01-42C]
 gi|256655104|dbj|BAI21031.1| prolyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-12]
          Length = 438

 Score =  217 bits (552), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 87/435 (20%), Positives = 157/435 (36%), Gaps = 41/435 (9%)

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEI 294
               E++   HR + R   +   A   SG+  W   G K+ + +   +R +      +E+
Sbjct: 13  ENPAEAQIVSHRLMLRAGLIRQTA---SGIYAWLPAGLKVLRNISQIVREEQDRVGAQEV 69

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
             P +    LW++SG +D+Y   M  ++      +  R     P N      +F   +KS
Sbjct: 70  LMPTLQSADLWKRSGRYDAYGPEMLRIQD-----RHKRELLYGPTNEEMITDLFGQTVKS 124

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIIS 413
           Y++LP  L      +R+E      G+MR R F   DA+ F    E       ++    + 
Sbjct: 125 YKDLPQVLYHIQWKFRDEMRPRF-GVMRGREFLMKDAYSFDLDYESAVATYRRMLLAYLR 183

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG--- 470
            ++  G   + ++  T P     S      A     GV        QD ++  V      
Sbjct: 184 TFQRLGVRAVPMRADTGPIGGELSHEFLILAPTGESGVFYDAALEEQDWLDEPVDTNSPV 243

Query: 471 --EGAF------YGPKFEYILKDAI----------GRDWQCGTIQVDFNLPSRFNAFYV- 511
             E  F      Y    E   +             GR  + G I    +  +R     V 
Sbjct: 244 ALEAFFNRVTTPYAATDEMHDEAGWQAVPAERQREGRGVEVGHIFYFGDKYTRSMDVSVS 303

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTITSSAVEY 567
                + +P M    +   + R  G +IE    +     P  ++P +A++  + +   E 
Sbjct: 304 GPDGNQLYPEMGSYGI--GVSRLAGAIIEACHDDNGIIWPDAVAPFRAVILNLKNG-DEL 360

Query: 568 AQEIANLLKSHHLSI-ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS 626
              I   + S +      D R E    K  +  +   P  I+ G + A E  + ++R  +
Sbjct: 361 CDAICERIYSTNEEAFLYDDRAERAGVKFADADLMGHPWQIVVGPRGAKEGKVELKRRAT 420

Query: 627 TTTQKVSLLDAIPIL 641
               +VS+ DA+ ++
Sbjct: 421 GERHEVSVDDALALV 435


>gi|289746410|ref|ZP_06505788.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987]
 gi|289686938|gb|EFD54426.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987]
          Length = 337

 Score =  216 bits (551), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 120/330 (36%), Positives = 181/330 (54%), Gaps = 28/330 (8%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVA-INGKVCDLSD-PVREGSI 59
           PS  ++  P G+     V   G        R      V V   +G + DLS  P  +  I
Sbjct: 16  PSQARIRVPAGTTAATAVGEAGLP-----RRGTPDAIVVVRDADGNLRDLSWVPDVDTDI 70

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
             +        +VIRHS AH++A+AVQ ++P+ ++ IGP I DGFYYDFD  +PF+ ++L
Sbjct: 71  TPVAANTDDGRSVIRHSTAHVLAQAVQELFPQAKLGIGPPITDGFYYDFDVPEPFTPEDL 130

Query: 120 AQIEKKMQEIIARDSPFLKQYL-SHEKARELFESKKEAYKVEILESIPAK--------EN 170
           A +EK+M++I+     F ++   S E+AR   E   E YK+E+++             + 
Sbjct: 131 AALEKRMRQIVKEGQLFDRRVYESTEQARA--ELANEPYKLELVDDKSGDAEIMEVGGDE 188

Query: 171 VTLY-------RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
           +T Y       R+  W DLCRGPH+ +T  +  F KL + + AYWRGD     L RIYGT
Sbjct: 189 LTAYDNLNPRTRERVWGDLCRGPHIPTTKHIPAF-KLTRSSAAYWRGDQKNASLQRIYGT 247

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISY 282
           AW +Q+ L ++L F+EE+++RDHRKL  E+DLF   ++ GSG+  +H KG  + + L  Y
Sbjct: 248 AWESQEALDRHLEFIEEAQRRDHRKLGVELDLFSFPDEIGSGLAVFHPKGGIVRRELEDY 307

Query: 283 MRRKIKD-DYEEINTPQVLDQHLWQQSGHW 311
            RRK  +  Y+ +N+P +    L+  SGH 
Sbjct: 308 SRRKHTEAGYQFVNSPHITKAQLFHTSGHL 337


>gi|329114694|ref|ZP_08243453.1| Prolyl-tRNA synthetase [Acetobacter pomorum DM001]
 gi|326696174|gb|EGE47856.1| Prolyl-tRNA synthetase [Acetobacter pomorum DM001]
          Length = 459

 Score =  216 bits (551), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 87/435 (20%), Positives = 157/435 (36%), Gaps = 41/435 (9%)

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEI 294
               E++   HR + R   +   A   SG+  W   G K+ + +   +R +      +E+
Sbjct: 34  ENPAEAQIVSHRLMLRAGLIRQTA---SGIYAWLPAGLKVLRNISQIVREEQDRVGAQEV 90

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
             P +    LW++SG +D+Y   M  ++      +  R     P N      +F   +KS
Sbjct: 91  LMPTLQSADLWKRSGRYDAYGPEMLRIQD-----RHKRELLYGPTNEEMITDLFGQTVKS 145

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIIS 413
           Y++LP  L      +R+E      G+MR R F   DA+ F    E       ++    + 
Sbjct: 146 YKDLPQVLYHIQWKFRDEMRPRF-GVMRGREFLMKDAYSFDLDYESAVATYRRMLLAYLR 204

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG--- 470
            ++  G   + ++  T P     S      A     GV        QD ++  V      
Sbjct: 205 TFQRLGVRAVPMRADTGPIGGELSHEFLILAPTGESGVFYDAALEEQDWLDEPVDTNSPI 264

Query: 471 --EGAF------YGPKFEYILKDAI----------GRDWQCGTIQVDFNLPSRFNAFYV- 511
             E  F      Y    E   +             GR  + G I    +  +R     V 
Sbjct: 265 ALEAFFNRVTTPYAATDEMHDEAGWQAVPAERQREGRGVEVGHIFYFGDKYTRSMDVSVS 324

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTITSSAVEY 567
                + +P M    +   + R  G +IE    +     P  ++P +A++  + +   E 
Sbjct: 325 GPDGNQLYPEMGSYGI--GVSRLAGAIIEACHDDNGIIWPDAVAPFRAVILNLKNG-DEL 381

Query: 568 AQEIANLLKSHHLSI-ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS 626
              I   + S +      D R E    K  +  +   P  I+ G + A E  + ++R  +
Sbjct: 382 CDAICERIYSTNEEAFLYDDRAERAGVKFADADLMGHPWQIVVGPRGAKEGKVELKRRAT 441

Query: 627 TTTQKVSLLDAIPIL 641
               +VS+ DA+ ++
Sbjct: 442 GERHEVSVDDALALV 456


>gi|58700192|ref|ZP_00374690.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|58533291|gb|EAL57792.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
          Length = 246

 Score =  216 bits (551), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 123/246 (50%), Positives = 171/246 (69%), Gaps = 6/246 (2%)

Query: 216 MLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKI 275
           ML RIYGTAW  + EL  YL  L+E+EKRDHRK+A++MDLFHI E+  G +FWH +G+ +
Sbjct: 1   MLQRIYGTAWRNKDELNAYLECLKEAEKRDHRKIAKDMDLFHIQEEAVGQVFWHEQGYIL 60

Query: 276 FQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           +  L SY+R+K+  + Y E+ TP ++ + LW++SGHWD +R NMF V        + +  
Sbjct: 61  YNVLESYIRKKLINNGYFEVKTPILVSKELWEKSGHWDKFRENMFIV-----DESESKKL 115

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           A+KPMNCP HV +FN   +SYR+LP+R+AEFG+ +RNE SGSLHGLMRVRGFTQDDAH+F
Sbjct: 116 AIKPMNCPCHVQIFNSHTRSYRDLPIRMAEFGTCHRNESSGSLHGLMRVRGFTQDDAHIF 175

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDT 454
           C +EQ+ +E +K  +L+  +Y + GF +I VK S RP+ R G D +WD AE  +   +  
Sbjct: 176 CMEEQVNSETIKFCDLLKEVYSELGFNEISVKFSDRPDVRAGDDEVWDRAEKALLEAVKE 235

Query: 455 IKNSSQ 460
              S +
Sbjct: 236 AGLSYE 241


>gi|262118515|pdb|3A31|A Chain A, Crystal Structure Of Putative Threonyl-Trna Synthetase
           Thrrs-1 From Aeropyrum Pernix (Selenomethionine
           Derivative)
          Length = 471

 Score =  216 bits (550), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 120/404 (29%), Positives = 189/404 (46%), Gaps = 41/404 (10%)

Query: 272 GWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G  I   L   + +   +  Y  + TP +    L++ SGH + YR N +          +
Sbjct: 48  GGPIRYALAEVLAKFHARRGYYVVETPIIASTELFKVSGHIEFYRNNXYLF------DIE 101

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRE---LPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
              FA+KP NCP H+ +F + +  +R    LP ++ EFG V+R EPSGS++GL+RVRGFT
Sbjct: 102 GHEFAVKPXNCPYHILLFLNEVAKHRSKLPLPFKVFEFGRVHRYEPSGSIYGLLRVRGFT 161

Query: 388 QDDAHVFCTKEQMFNECLKIHN---LIISIYKDFGFEKIMVK-------LSTRPEKRVGS 437
           QDDAH+     ++ +    +     L++      G      K        S   ++  GS
Sbjct: 162 QDDAHIIVPGGRVIDVVYDVFEEXKLVLERLFKLGVSSETFKVRLSXSDKSLIGKEFXGS 221

Query: 438 DALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL---KDAIGRDWQCG 494
              W+ AE  ++     I    +  I+   L GE AFYGPK ++I    +  + ++WQ G
Sbjct: 222 KEEWEGAEEALREAASRINE--KYGIDIVELEGEAAFYGPKLDFIXXVEESGVSKEWQXG 279

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPV-MIHRAVFGSIERFIGIMIENFKGNLPLWLSPI 553
           TIQ DFNLP RF  + V         V +IHRA+ GSIERF+G+ +E+ +G  P  L+PI
Sbjct: 280 TIQFDFNLPRRFRLYDVVREEFGIEEVYIIHRALLGSIERFLGVYLEHRRGRXPFTLAPI 339

Query: 554 QAIVTTITS------SAVEYAQEIANLLKSHHLSIETDFRNET-INYKIREHS-IKKIPI 605
           Q  V  + +         + A  IA  L      +     ++T ++  +R      K  +
Sbjct: 340 QFAVIAVKTGGEVDREIEDLASSIAKGLLDKGFRVAVKGSSKTGLSSDVRHIESTAKPAV 399

Query: 606 IIICGDKEASERSIGIRRFGSTTTQKVSL-------LDAIPILT 642
            +  G KE  E+ + +R F   + ++  L        DA+  L 
Sbjct: 400 NVFIGAKEVREKVLDVRVFDLESXKRRRLAIAYGDAADAVENLA 443


>gi|215404566|ref|ZP_03416747.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987]
          Length = 342

 Score =  216 bits (550), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 120/330 (36%), Positives = 181/330 (54%), Gaps = 28/330 (8%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVA-INGKVCDLSD-PVREGSI 59
           PS  ++  P G+     V   G        R      V V   +G + DLS  P  +  I
Sbjct: 21  PSQARIRVPAGTTAATAVGEAGLP-----RRGTPDAIVVVRDADGNLRDLSWVPDVDTDI 75

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
             +        +VIRHS AH++A+AVQ ++P+ ++ IGP I DGFYYDFD  +PF+ ++L
Sbjct: 76  TPVAANTDDGRSVIRHSTAHVLAQAVQELFPQAKLGIGPPITDGFYYDFDVPEPFTPEDL 135

Query: 120 AQIEKKMQEIIARDSPFLKQYL-SHEKARELFESKKEAYKVEILESIPAK--------EN 170
           A +EK+M++I+     F ++   S E+AR   E   E YK+E+++             + 
Sbjct: 136 AALEKRMRQIVKEGQLFDRRVYESTEQARA--ELANEPYKLELVDDKSGDAEIMEVGGDE 193

Query: 171 VTLY-------RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
           +T Y       R+  W DLCRGPH+ +T  +  F KL + + AYWRGD     L RIYGT
Sbjct: 194 LTAYDNLNPRTRERVWGDLCRGPHIPTTKHIPAF-KLTRSSAAYWRGDQKNASLQRIYGT 252

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISY 282
           AW +Q+ L ++L F+EE+++RDHRKL  E+DLF   ++ GSG+  +H KG  + + L  Y
Sbjct: 253 AWESQEALDRHLEFIEEAQRRDHRKLGVELDLFSFPDEIGSGLAVFHPKGGIVRRELEDY 312

Query: 283 MRRKIKD-DYEEINTPQVLDQHLWQQSGHW 311
            RRK  +  Y+ +N+P +    L+  SGH 
Sbjct: 313 SRRKHTEAGYQFVNSPHITKAQLFHTSGHL 342


>gi|144899844|emb|CAM76708.1| prolyl-tRNA synthetase [Magnetospirillum gryphiswaldense MSR-1]
          Length = 429

 Score =  216 bits (549), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 79/424 (18%), Positives = 154/424 (36%), Gaps = 31/424 (7%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
            E++   HR + R   +    +  SG+  W   GWK+ Q +   +R +      +E+  P
Sbjct: 16  SEAQIASHRLMLRAGMIR---QSASGIYTWLPLGWKVLQKIEQIVREEQDAAGAQELLMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    +W++SG +D+Y   M  +    D     R     P N      +F   +KSYRE
Sbjct: 73  TIQSADIWRESGRYDAYGKEMLRIVDRHD-----REMLFGPTNEELITQIFRDNVKSYRE 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYK 416
           LP  L      +R+E      G+MR R F   D++ F    +        + N  +  +K
Sbjct: 128 LPKILYHIQWKFRDEVRPRF-GVMRGREFLMKDSYSFDIDFDGAKRSYEAMFNAYLRTFK 186

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
             G   I +   +       +      AE    GV   +        +   L      Y 
Sbjct: 187 RMGLTAIPMVADSGAIGGNLTHEFHVLAETGESGVFYDVAYEELAAKDAVDLEALSKLYA 246

Query: 477 PKFEYILKDA----------IGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
              E    ++          + R  + G I       S+     V       +PV +   
Sbjct: 247 VTDEKHDPNSPECPPADRLKVARGIEVGHIFYFGTKYSKAMGAVVA--GPDGNPVHVEMG 304

Query: 527 VFGS-IERFIGIMIE----NFKGNLPLWLSPIQAIVTTITS---SAVEYAQEIANLLKSH 578
            +G  + R +G +IE    +     P  ++P +  +  + +   +     +++   L   
Sbjct: 305 SYGIGVSRLVGAIIEAYHDDRGIKWPEAVAPFKVGLINLKAGDGACDRVCEDMYRALSEQ 364

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
            + +  D R++    K  +  +  +P  ++ G K  +   + ++   +   Q++S+  A+
Sbjct: 365 GVEVLYDDRDDRAGVKFADMDLIGLPWQLVAGPKGVAAGLVELKNRHTGEKQELSVEAAL 424

Query: 639 PILT 642
             LT
Sbjct: 425 AQLT 428


>gi|115524551|ref|YP_781462.1| prolyl-tRNA synthetase [Rhodopseudomonas palustris BisA53]
 gi|122296196|sp|Q07NK2|SYP_RHOP5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|115518498|gb|ABJ06482.1| prolyl-tRNA synthetase [Rhodopseudomonas palustris BisA53]
          Length = 439

 Score =  215 bits (548), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 81/433 (18%), Positives = 158/433 (36%), Gaps = 37/433 (8%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           +E+E   HR + R   L    ++ +G+  W   G ++ + +   +R +       E+  P
Sbjct: 16  KEAEIVSHRLMLRAGMLR---QEAAGIYAWLPLGHRVLKKIEQIVREEQNRAGAIELLMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW++SG +D+Y   M  +       +  R     P N      +F   +KSY+ 
Sbjct: 73  TLQLADLWRESGRYDAYGPEMLRI-----ADRHKRELLYGPTNEEMITEIFRAYVKSYKS 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYK 416
           LP+ L      +R+E      G+MR R F   DA+ F   E        ++    +  + 
Sbjct: 128 LPLNLYHIQWKFRDEQRPRF-GVMRGREFLMKDAYSFDIDEAAARRAYNRMFVAYLRTFA 186

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIK---------NSSQDRINTGV 467
             G + I ++  T P     S      AE     V    +         +   D   T +
Sbjct: 187 RMGLKAIPMRAETGPIGGDLSHEFIVLAETGESAVYCDSEVLNLPVPGEDVDYDGDLTPI 246

Query: 468 LLGEGAFYGPKFEYILKDAIGRDWQCGTI---------QVDFNLPSRFNAFYVNSHSEKC 518
           +    + Y    +    +   R+               Q+ +       A          
Sbjct: 247 IKQWTSVYAATEDVHEAERFDREVPAERKLHTRGIEVGQIFYFGTKYSEAMKALVAGPDG 306

Query: 519 HPVMIHRAVFGS-IERFIGIMIENFKG----NLPLWLSPIQAIVTTITSSAVEY---AQE 570
             V IH   +G  + R +G +IE          P  ++P +A +  +   A E     ++
Sbjct: 307 VEVPIHGGSYGVGVSRLLGAIIEACHDENGIKWPEAVAPFRAAILNLKQGAAETDAACEQ 366

Query: 571 IANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
           +   L +  + +  D  ++    K     +  IP  I+ G K  ++ ++ ++R    + +
Sbjct: 367 LYRELIAKGVDVLYDDTDQRAGAKFATADLIGIPWQILVGPKGLADGTVELKRRADGSRE 426

Query: 631 KVSLLDAIPILTK 643
            V+L +A+  LT+
Sbjct: 427 NVALAEAVARLTQ 439


>gi|330994071|ref|ZP_08318001.1| Prolyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1]
 gi|329759017|gb|EGG75531.1| Prolyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1]
          Length = 440

 Score =  215 bits (547), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 78/436 (17%), Positives = 152/436 (34%), Gaps = 39/436 (8%)

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEI 294
               E++   HR + R   +   A    G+  W   G ++ + + + +R +      +E+
Sbjct: 13  ENPTEAQITSHRLMLRAGMIRQTAA---GIYAWLPTGLRVLRNIANIVRAEQDAIGAQEL 69

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
             P +    LW++SG +D+Y   M  ++      +  R     P N      +F   +KS
Sbjct: 70  LMPTMQSAELWKRSGRYDAYGPEMLRIQD-----RHERDMLFGPTNEEMVTDLFGQAIKS 124

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIIS 413
           Y+ELP  L +    +R+E      G+MR R F   DA+ F        +  + +    + 
Sbjct: 125 YKELPQVLYQIQWKFRDEVRPRF-GVMRGREFYMKDAYSFDLDHAAAVDTYRRMMLSYLR 183

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE-- 471
            ++  G   I ++  T P     S      A     GV        QD +   + + +  
Sbjct: 184 TFQRLGVRAIPMRADTGPIGGELSHEFLILAPTGESGVFFDSALEEQDWVGETIDVNDRD 243

Query: 472 ---------GAFYGPKFEYILKDAI----------GRDWQCGTIQ-VDFNLPSRFNAFYV 511
                     +FY    E   + A           GR  + G I           +    
Sbjct: 244 ALGAFFTSLTSFYAATDEMHDEAAWAKVPAERRREGRGIEVGHIFNFGRKYTQSMDIAVS 303

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTITSSAVEY 567
                  HP M    +   + R +  +IE          P  ++P +A++  + +   + 
Sbjct: 304 GPDGAPLHPEMGSYGI--GVSRLVAAIIEASHDENGIIWPESVAPFRAVIINLKNGDAQC 361

Query: 568 AQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGST 627
                 L  +    +  D R E    K  +  +   P  +I G + A E  + ++   + 
Sbjct: 362 DAICEKLYAAAPDDLLYDDRAERAGAKFADADLLGHPWQLIVGPRGAKEGKVEVKNRRTG 421

Query: 628 TTQKVSLLDAIPILTK 643
              + ++  A+ ++ K
Sbjct: 422 ERTEETVDAALALIMK 437


>gi|296536135|ref|ZP_06898264.1| proline--tRNA ligase [Roseomonas cervicalis ATCC 49957]
 gi|296263547|gb|EFH10043.1| proline--tRNA ligase [Roseomonas cervicalis ATCC 49957]
          Length = 436

 Score =  215 bits (547), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 84/427 (19%), Positives = 149/427 (34%), Gaps = 35/427 (8%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+    H+ + R   +   +    G+  W   G ++ Q +   +R +      +EI  P 
Sbjct: 17  EAAIASHKLMLRAGMIRQTSA---GIYAWLPLGLRVLQKVSQIVREEQDAAGAQEILMPT 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW+QSG +D Y   M  +     T +  R     P N      +F    KSYR+L
Sbjct: 74  IQSAELWKQSGRYDDYGKEMLRI-----TDRHEREMLFGPTNEEMVTDLFKSYAKSYRDL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKD 417
           P  L      +R+E      G+MR R F   DA+ F    E       K+    +  +  
Sbjct: 129 PRNLYHIQWKFRDEIRPRF-GVMRGREFLMKDAYSFDIDAEAARLSYKKMFVAYLRTFAR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIM------KGVLD----TIKNSSQDRINTGV 467
            G + I ++  T P     S      AE         K +L+      K   +  ++  V
Sbjct: 188 MGLKAIPMRADTGPIGGDLSHEFIILAETGESQVYLHKDLLEFDVLAQKPDYEGDLDPTV 247

Query: 468 LLGEGAFYGPKFEYI---LKDAIGRDWQCGTI-----QVDFNLPSRFNAFYVNSHSEKCH 519
                  Y    E       +A+G + Q          + +       A  +       +
Sbjct: 248 DFWTSR-YAATDEMHDEAAWNALGAENQVSARGIEVGHIFYFGEKYSKAMGLTVAGPDGN 306

Query: 520 PVMIHRAVFGS-IERFIGIMIE----NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANL 574
           PV+     +G  + R +G +IE    +     P  ++P +  +  +    +        L
Sbjct: 307 PVIPQMGSYGIGVSRLLGALIEANHDDAGIKWPDAVAPFRCAILNLKPGDLATDALSEKL 366

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
             +       D R E    K  +  +   P   I G + A+   I ++R  +   Q+VS+
Sbjct: 367 YAALGGDAVYDDRGERAGVKFNDADLAGYPWQAIIGPRGAANGIIELKRRATGERQEVSI 426

Query: 635 LDAIPIL 641
             A+  +
Sbjct: 427 EAALAQI 433


>gi|27379988|ref|NP_771517.1| prolyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110]
 gi|81841648|sp|Q89KM8|SYP_BRAJA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|27353142|dbj|BAC50142.1| prolyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110]
          Length = 439

 Score =  215 bits (547), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 82/439 (18%), Positives = 160/439 (36%), Gaps = 45/439 (10%)

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEI 294
              +E+E   HR + R   +    ++ +G+  W   G+++ + +   +R +       E+
Sbjct: 13  ENPKEAEIVSHRLMLRAGMIR---QEAAGIYAWLPLGFRVLKKIEQIVREEQDRSGALEL 69

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
             P +    LW++SG +D+Y   M  +       +  R     P N      +F   +KS
Sbjct: 70  LMPTLQLADLWRESGRYDAYGPEMLRI-----ADRHKRELLYGPTNEEMITEIFRAYVKS 124

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIIS 413
           Y+ LP+ L      +R+E      G+MR R F   DA+ F   E        K+    + 
Sbjct: 125 YKNLPLNLYHIQWKFRDEQRPRF-GVMRGREFLMKDAYSFDLNEAAARVAYNKMFVAYLR 183

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN------IMKGVLDTIKNSSQDRINTGV 467
            +   G + I ++  T P     S      AE       I + VLD +    +D ++   
Sbjct: 184 TFARMGLKAIPMRAETGPIGGDLSHEFIVLAETGESGVFINRDVLD-LPVPGED-VDYES 241

Query: 468 LLGEG-----AFYGPKFEYILKDAIGRDWQCGTI-----------QVDFNLPSRFNAFYV 511
            L        + Y    +    DA   + +               Q+ +           
Sbjct: 242 DLTPIIKQWTSVYAATEDVH--DAARFEQEVPEAKRLNTRGIEVGQIFYFGTKYSEPMKA 299

Query: 512 NSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG----NLPLWLSPIQAIVTTITS---S 563
                    V IH   +G  + R +G +IE          P  ++P +A+V  +     +
Sbjct: 300 MVAGPDGVDVPIHGGSYGVGVSRLLGAIIEACHDDAGIKWPEAVAPFRAVVLNLKQGDAA 359

Query: 564 AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRR 623
                +++   L++  + +  D  ++    K     +  IP  I+ G K  ++  + ++R
Sbjct: 360 VDAACEKLYAELQAKGVDVLYDDTDQRAGAKFAAADLIGIPWQIMIGPKGLADGKVELKR 419

Query: 624 FGSTTTQKVSLLDAIPILT 642
               + + +S  DA+  L 
Sbjct: 420 RSDGSRETMSPADAVARLV 438


>gi|212696508|ref|ZP_03304636.1| hypothetical protein ANHYDRO_01046 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212676493|gb|EEB36100.1| hypothetical protein ANHYDRO_01046 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 230

 Score =  214 bits (545), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 93/229 (40%), Positives = 143/229 (62%), Gaps = 4/229 (1%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEII 62
            IK+  PD S+K +    +  DV + IS  L + AV   +NGKV   ++P+ E S  +++
Sbjct: 2   MIKIKLPDESVKEYEKGVSVGDVTKDISEGLFRSAVGAVVNGKVMGYAEPINEDSDFKVV 61

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
             ED     +  H+ +H+MA A++ +WPE + AIGP I++GFYYD D E  F  ++L +I
Sbjct: 62  KFEDKEGKEIFWHTSSHLMAAAIKEMWPEAKFAIGPAIDNGFYYDIDLEHRFVPEDLPKI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE--WF 180
           E KM+EI  +D   +++ +S  +A E F+ + + YKVE++E +P  E +TLY  G+  + 
Sbjct: 122 EAKMKEIAKKDLKMVRKEISRAEALEYFKKENQEYKVELIEDLPEDELITLYEMGDNVFV 181

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQ 229
           DLC+GPH+ ST  +K   KL  +AGAYWRGDS+R ML RIYG ++  + 
Sbjct: 182 DLCKGPHLLSTKSIK-AVKLNSIAGAYWRGDSDRKMLQRIYGISFEKKN 229


>gi|218506204|ref|ZP_03504082.1| threonyl-tRNA synthetase [Rhizobium etli Brasil 5]
          Length = 213

 Score =  213 bits (543), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 129/186 (69%), Positives = 156/186 (83%)

Query: 389 DDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIM 448
           DDAH+FCT EQM  ECLKI++LI+S+Y+DFGF++I+VKLSTRPEKRVGSDALWD AE +M
Sbjct: 1   DDAHIFCTDEQMAAECLKINDLILSVYEDFGFKEIVVKLSTRPEKRVGSDALWDRAEAVM 60

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
             VL TI+  S+ RI TG+L GEGAFYGPKFEY LKDAIGR+WQCGT QVDFNLP RF A
Sbjct: 61  TDVLKTIEAQSEGRIKTGILPGEGAFYGPKFEYTLKDAIGREWQCGTTQVDFNLPERFGA 120

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYA 568
           FY++S+SEK  PVMIHRA+ GS+ERF+GI+IENF G++PLW+SP+Q +V TITS A  Y 
Sbjct: 121 FYIDSNSEKTQPVMIHRAICGSMERFLGILIENFAGHMPLWVSPLQVVVATITSEADAYG 180

Query: 569 QEIANL 574
            E+A  
Sbjct: 181 LEVAER 186


>gi|213022828|ref|ZP_03337275.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 167

 Score =  213 bits (542), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 70/164 (42%), Positives = 103/164 (62%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPL 548
           R WQCGT+Q+DF+LPSR +A YV   +E+  PVMIHRA+ GS+ERFIGI+ E F G  P 
Sbjct: 1   RAWQCGTVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAGFFPT 60

Query: 549 WLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIII 608
           WL+P+Q +V  IT S  EY  E+   L++  + ++ D RNE I +KIREH+++++P +++
Sbjct: 61  WLAPVQVVVMNITDSQSEYVNELTQKLQNAGIRVKADLRNEKIGFKIREHTLRRVPYMLV 120

Query: 609 CGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           CGDKE     + +R         + + D I  L +E      Q+
Sbjct: 121 CGDKEVEAGKVAVRTRRGKDLGSLDVNDVIEKLQQEIRSRSLQQ 164


>gi|254294083|ref|YP_003060106.1| prolyl-tRNA synthetase [Hirschia baltica ATCC 49814]
 gi|254042614|gb|ACT59409.1| prolyl-tRNA synthetase [Hirschia baltica ATCC 49814]
          Length = 441

 Score =  213 bits (542), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 84/449 (18%), Positives = 157/449 (34%), Gaps = 41/449 (9%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  L        E++   H+ + R   +      GSG+  W   G ++ + + + +R +
Sbjct: 4   SKFFLPVLKETPAEAKIISHQLMLRAGMVKQT---GSGIYTWLPLGLRVLKKIENIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
                  E+  P +    LW++SG +D+Y   M  +    D     R     P N     
Sbjct: 61  QNRAGAIELLMPTIQPADLWKESGRYDAYGKEMLRITDRHD-----REMLFGPTNEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE-C 404
            +F   +KSY++LP+ L      +R+E      G+MR R F   DA+ F   E    +  
Sbjct: 116 DIFRSYVKSYKQLPLNLYHIQWKFRDEIRPRF-GVMRGREFLMKDAYSFDVNEVEARKSY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIK-------- 456
            K+    ++ +   G + + ++  T P     S      AE     V    +        
Sbjct: 175 YKMFCAYLNTFSRMGLKAVPMRADTGPIGGDLSHEFIILAETGESEVFCDAELVNMPPPG 234

Query: 457 -NSSQDRINTGVLLGEGAFYGPKFEYILKD-----------AIGRDWQCGTIQ-VDFNLP 503
            +   D    G       +Y    E   +               R  + G I        
Sbjct: 235 LDLDFDSDLLGEFEKRTQYYAATEEMHDQTKFESEVPEERRVSARGIEVGHIFNFGTKYS 294

Query: 504 SRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP-LWLSPIQ-----AIV 557
               A  +     K  PV +     G   R +G +IE    +   +W   +       + 
Sbjct: 295 EPMKAKVMTPEG-KEAPVHMGSYGVGVS-RLLGAIIEACHDDKGVIWPEEVAPFKSAVVN 352

Query: 558 TTITSSAVEYA-QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASE 616
                 A + A +++   L++  L    D R++    K+    +  IP  I+ G +    
Sbjct: 353 LRQGDEACDKACEDVYAKLRATGLDPMYDDRDDRPGAKLSTLELIGIPKAIVIGPRGLKN 412

Query: 617 RSIGIRRFGSTTTQKVSLLDAIPILTKES 645
             + ++   S  T+++SL  A+  LT  +
Sbjct: 413 GVVEVKDRISGVTEEMSLDAALNKLTASA 441


>gi|222085595|ref|YP_002544125.1| prolyl-tRNA synthetase protein [Agrobacterium radiobacter K84]
 gi|221723043|gb|ACM26199.1| prolyl-tRNA synthetase protein [Agrobacterium radiobacter K84]
          Length = 475

 Score =  212 bits (540), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 80/453 (17%), Positives = 153/453 (33%), Gaps = 54/453 (11%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +       +E+E   HR + R   +   ++   G+  W   G ++   +   +R +
Sbjct: 39  SRYFMPILKENPKEAEIVSHRLMLRAGMIRQQSQ---GIYSWLPLGKRVLDKVNKIIREE 95

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
                  E++ P +    LWQ+SG +D+Y   M  +K   D     R     P N     
Sbjct: 96  QNRSGAIELSMPTLQSAELWQESGRYDAYGKEMLRIKDRQD-----RPMLYGPTNEEMIT 150

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNEC 404
            +F   +KSY++LP+ L      +R+E      G MR R F   DA+ F  T+E      
Sbjct: 151 DIFRSSVKSYKDLPLNLYHIQLKFRDEIRPRF-GTMRSREFMMKDAYSFDLTQEGAVIAY 209

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            K+    +  +   G   I ++  T P     S         I+    ++     +D +N
Sbjct: 210 NKMFAAYLRTFDRLGLRAIPMRADTGPIGGELSHEF-----IILADTGESEVFCHKDFVN 264

Query: 465 TGVLLGEGAF----------------YGPKFEYILKDAIG----------RDWQCGTIQV 498
             +   +  F                Y    E   +              R  + G I  
Sbjct: 265 FDIPSEDTNFDDVAGLKGIFDKWTSLYAATSEMHDEATFNAIPEGERLSARGIEVGHIFY 324

Query: 499 -DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN----LPLWLSP 552
                     A       ++     +H   +G    R +  +IE          P  ++P
Sbjct: 325 FGTKYSEPMGAKVQGPDGKEHA---VHMGSYGIGPTRLVPAIIEASHDENGIIWPASVAP 381

Query: 553 IQAIVTTITS---SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIIC 609
              +V  + S   +     + I   L      +  D R++    K     +  +P+ II 
Sbjct: 382 FDVVVINMKSGDQACDAACETIYAALSKAGKDVLFDDRDDRAGTKFATADLIGVPVQIIV 441

Query: 610 GDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           G +  +   + ++   +   + +++  AI  L 
Sbjct: 442 GPRSIAGGEVEVKDRKTGARETMTVEAAINKLA 474


>gi|91977335|ref|YP_569994.1| prolyl-tRNA synthetase [Rhodopseudomonas palustris BisB5]
 gi|123762679|sp|Q135Z6|SYP_RHOPS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|91683791|gb|ABE40093.1| prolyl-tRNA synthetase [Rhodopseudomonas palustris BisB5]
          Length = 439

 Score =  212 bits (540), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 76/436 (17%), Positives = 163/436 (37%), Gaps = 39/436 (8%)

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEI 294
              +E+E   HR + R   L    ++ +G+  W   G ++ + +   +R +       E+
Sbjct: 13  ENPKEAEIVSHRLMLRAGMLR---QEAAGIYAWLPLGHRVLKKIEQIVREEQNRAGAIEL 69

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
             P +    LW++SG +D+Y   M  +       +  R     P N      +F   +KS
Sbjct: 70  LMPTLQLADLWRESGRYDAYGPEMLRI-----ADRHKRELLYGPTNEEMITEIFRAYVKS 124

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIIS 413
           Y+ LP+ L      +R+E      G+MR R F   DA+ F   E    +   ++    + 
Sbjct: 125 YKSLPLNLYHIQWKFRDEQRPRF-GVMRGREFLMKDAYSFDVDEAAARKSYNRMFVAYLR 183

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIM------KGVLDTIKNSSQD------ 461
            +   G + I ++  T P     S      AE         + VL+ +    +D      
Sbjct: 184 TFARMGLKAIPMRAETGPIGGDLSHEFIVLAETGESGVYCDRDVLN-LPVPGEDVDYDGD 242

Query: 462 ------RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSH 514
                 +  +     E      ++E  + +A   + +   + Q+ +      ++   N  
Sbjct: 243 LTPIIQQWTSVYAATEDVHDAARYESEVPEANRLNTRGIEVGQIFYFGTKYSDSMKANVA 302

Query: 515 SEKCHPVMIHRAVFGS-IERFIGIMIENFKG----NLPLWLSPIQAIVTTI--TSSAVEY 567
                   IH   +G  + R +G +IE          P  ++P +  +  +    +  + 
Sbjct: 303 GPDGADAPIHGGSYGVGVSRLVGAIIEACHDENGIKWPEEVAPFRVAILNLKQGDAQTDA 362

Query: 568 A-QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS 626
           A +++   L +  + +  D  ++    K     +  IP  ++ G K  ++  + ++R   
Sbjct: 363 ACEQLYRELAAKGVDVLYDDTDQRAGAKFATADLIGIPWQVLVGPKGLADGKVELKRRSD 422

Query: 627 TTTQKVSLLDAIPILT 642
            + + ++L +A+  L 
Sbjct: 423 GSRETIALAEAVARLA 438


>gi|282162921|ref|YP_003355306.1| truncated threonyl-tRNA synthetase [Methanocella paludicola SANAE]
 gi|282155235|dbj|BAI60323.1| truncated threonyl-tRNA synthetase [Methanocella paludicola SANAE]
          Length = 477

 Score =  212 bits (540), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 90/434 (20%), Positives = 172/434 (39%), Gaps = 29/434 (6%)

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIF-WHRKGWKIFQTLISY 282
               +  +      +   ++    K+ +  +L           F ++ KG+ IF+ L  +
Sbjct: 47  CKPLESYVVSEELKMPPMKEPPSIKIMQGHELVGYEPSSDSGNFRFYPKGYLIFELLRDW 106

Query: 283 MRRKIKDDY--EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
                 + +   ++++P + D    Q      ++    + VK  D   KD   F L+   
Sbjct: 107 AYDIAINRFKAIQVDSPLLFDWDDPQIKEQAGTFHERHYTVKAPDHPEKD---FILRFAG 163

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQ 399
             G   +      SYR LP+R+ EF   +R E  G L GL R+R F   D H FC   ++
Sbjct: 164 DFGLFKIMKDATISYRNLPLRMYEFSKSFRYERDGELSGLKRLRAFHMPDIHCFCRDIDE 223

Query: 400 MFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSS 459
            +NE  +++     +    G E  +V              + D      K  +  +   S
Sbjct: 224 GWNEYQELYRNYADLCDASGVEYAVVFR------------IVDSFYLQNKSRIADLVKYS 271

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
                  VL     ++  K E+   D+     Q  T+Q+D    + +   Y +S  +K  
Sbjct: 272 NTPAFVEVLSDMKHYWAVKNEFQGVDSTRSCIQLSTVQLDVKDAAVYGIDYTDSDGKKKG 331

Query: 520 PVMIHRAVFGSIERFIGIMIE----NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLL 575
            ++ H ++ GSIER+   ++E    +    LP WLSP Q  +  ++   + Y +     L
Sbjct: 332 CIICHSSI-GSIERWYYSILEEALKHETPTLPAWLSPTQVRIIPVSEKQLNYCK----YL 386

Query: 576 KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
               + ++ D  ++T++ KI   S++ +P + + GDKE       +    S     ++  
Sbjct: 387 DIDGVRVDVDDSDDTLSKKIARASMEWVPYVAVVGDKEVESGLFSVSIRQSGKRVSMTRD 446

Query: 636 D-AIPILTKESLPP 648
           + A+ +  K +  P
Sbjct: 447 ELALEVKKKCAGRP 460


>gi|209885076|ref|YP_002288933.1| prolyl-tRNA synthetase [Oligotropha carboxidovorans OM5]
 gi|226701315|sp|B6JH58|SYP_OLICO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|209873272|gb|ACI93068.1| prolyl-tRNA synthetase [Oligotropha carboxidovorans OM5]
          Length = 441

 Score =  212 bits (540), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 82/438 (18%), Positives = 153/438 (34%), Gaps = 43/438 (9%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           +E+E   HR + R   L    ++ +G+  W   G+++ + +   +R +       E+  P
Sbjct: 16  KEAEIASHRLMLRAGMLR---QEAAGIYAWLPLGFRVLKKIERIVREEQNRAGAIELLMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW++SG +D+Y   M  +       +  R     P N      +F   +KSYR 
Sbjct: 73  TLQLADLWRESGRYDAYGPEMLRI-----ADRHKRELLYGPTNEEMITEIFRSYVKSYRN 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYK 416
           LP+ L      +R+E      G+MR R F   DA+ F   E        K+    +  + 
Sbjct: 128 LPLNLYHIQWKFRDEQRPRF-GVMRGREFLMKDAYSFDLDEAAARLSYNKMFVAYLRTFA 186

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENI------MKGVLDTIKNSSQ---------- 460
             G + I ++  T P     S      AE         K VLD                 
Sbjct: 187 RMGLKAIPMRAETGPIGGDLSHEFIVLAETGESGVFCNKDVLDLPVPGEDVDYDSDLTPI 246

Query: 461 -DRINTGVLLGEGAFYGPKFEYILKDAIG---RDWQCGTIQV-DFNLPSRFNAFYVNSHS 515
             +        E      ++E  +        R  + G I            A  V    
Sbjct: 247 IKQWTELYAATEDVHDAARYETEVPAEKRVNTRGIEVGQIFYFGTKYSDSMKALVVGPDG 306

Query: 516 EKCHPVMIHRAVFGS-IERFIGIMIENFKG----NLPLWLSPIQAIVTTITSSAVEY--- 567
            +     +H   +G  + R +G +IE          P  ++P    +  +   A +    
Sbjct: 307 VEK---PVHSGSYGVGVSRLVGAIIEACHDENGIKWPEAVAPFTVAILNLKQGASDTDAA 363

Query: 568 AQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGST 627
            +++   L ++ + +  D  ++    K     +  IP  I+ G K  +E  + I+     
Sbjct: 364 CEKLYRALTANGVDVLYDDTDQRPGGKFATADLIGIPWQILIGPKGLAEGKVEIKCRADG 423

Query: 628 TTQKVSLLDAIPILTKES 645
           + + +S  DA+     ++
Sbjct: 424 SRELMSPEDALARFGAKA 441


>gi|90423927|ref|YP_532297.1| prolyl-tRNA synthetase [Rhodopseudomonas palustris BisB18]
 gi|114152242|sp|Q215F8|SYP_RHOPB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|90105941|gb|ABD87978.1| prolyl-tRNA synthetase [Rhodopseudomonas palustris BisB18]
          Length = 439

 Score =  212 bits (539), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 78/432 (18%), Positives = 156/432 (36%), Gaps = 37/432 (8%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           +E+E   HR + R   +    ++ +G+  W   G ++ + +   +R +       E   P
Sbjct: 16  KEAEIVSHRLMLRAGMMR---QEAAGIYAWLPLGLRVLKKIEQIVREEQNRAGAIECLMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW++SG +D+Y   M  +     T +  R     P N      +F   ++SY+ 
Sbjct: 73  TLQLADLWRESGRYDAYGPEMLRI-----TDRHKRELLYGPTNEEMITEIFRAYVRSYKN 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYK 416
           LP+ L      +R+E      G+MR R F   DA+ F   E    +   ++    +  + 
Sbjct: 128 LPLNLYHIQWKFRDEQRPRF-GVMRGREFLMKDAYSFDIDEAAARKSYNRMFVAYLRTFA 186

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL---DTIKNS------SQDRINTGV 467
             G + I ++  T P     S      AE    GV    D +           D   T +
Sbjct: 187 RMGLKAIPMRAETGPIGGDLSHEFIVLAETGESGVFCDSDVLNLPVPGDDVDYDGDLTPI 246

Query: 468 LLGEGAFYGPKFEYILKDAIGRDWQCGTI---------QVDFNLPSRFNAFYVNSHSEKC 518
           +    + Y    +    +   R+               Q+ +      +           
Sbjct: 247 IKQWTSVYAATEDVHDAERFEREVPADKKLNTRGIEVGQIFYFGTKYSDKMKALVAGPDG 306

Query: 519 HPVMIHRAVFGS-IERFIGIMIENFKG----NLPLWLSPIQAIVTTITSSAVEY---AQE 570
             V +H   +G  + R +G +IE          P  ++P +A +  +   + +     + 
Sbjct: 307 VDVPVHGGSYGVGVSRLVGAIIEACHDENGIKWPEEVAPFRAAILNLKQGSADTDAACEA 366

Query: 571 IANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
           +   L +  + +  D  ++    K     +  IP  I+ G K  +E  + ++R    + +
Sbjct: 367 LYKELSAKGVDVLYDDTDQRAGGKFATADLIGIPWQILVGPKGLAEGKVELKRRADGSRE 426

Query: 631 KVSLLDAIPILT 642
            V+  +A+  LT
Sbjct: 427 NVTPAEAVARLT 438


>gi|148555262|ref|YP_001262844.1| prolyl-tRNA synthetase [Sphingomonas wittichii RW1]
 gi|166980160|sp|A5V8U0|SYP_SPHWW RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|148500452|gb|ABQ68706.1| prolyl-tRNA synthetase [Sphingomonas wittichii RW1]
          Length = 437

 Score =  211 bits (538), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 79/444 (17%), Positives = 151/444 (34%), Gaps = 39/444 (8%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  L        +++   H+ + R   +   A    G+  W   G ++ + +   +R +
Sbjct: 4   SRHFLPVMKESPADAQIVSHKLMLRAGMIRQTAA---GIYAWLPLGHRVLRKIEQIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
                  E+  P +    LW++SG +D+Y   M  +K   D     R     P N     
Sbjct: 61  QDRAGAIELLMPTMQSADLWRESGRYDAYGPEMLRIKDRHD-----REMLFGPTNEEMIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
           A+F    +SYR+LP  L      +R+E      G+MR R F   DA+ F    E   +  
Sbjct: 116 AIFRDNARSYRDLPRILYHIQWKFRDEVRPRF-GVMRGREFLMKDAYSFDLDIEGARHSY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            ++    +  ++  G   I ++  T P     S      A      V        +  ++
Sbjct: 175 NRMFVAYLRTFRRMGLSAIPMQADTGPIGGDLSHEFIVLAPTGESEVFYHTNWEVERALD 234

Query: 465 TGVL---LGEGAFYGPKFEYILKDA---------------IGRDWQCGTIQV-DFNLPSR 505
             V      +G   G   +Y   D                  R  + G I        + 
Sbjct: 235 VDVDDVAALQGFVDGLTADYAATDEKRDPAREAAAGDSLKQSRGIEVGHIFYFGTKYSAA 294

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTIT 561
                     +   P M    +   + R +G +IE    +     P  ++P    +  + 
Sbjct: 295 MGMTVQGPDGQPVTPQMGSYGI--GVSRLMGAIIEASHDDAGIVWPDAVAPYTVGLINMR 352

Query: 562 SSAVEYAQE---IANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERS 618
           +     A     +   L++  +    D R+E    K     +  +P  I+ G K   +  
Sbjct: 353 ADDARCAAAADDLYAKLEAAGIETLYDDRDERGGAKFATMDLIGLPWQIVVGPKGLDKGV 412

Query: 619 IGIRRFGSTTTQKVSLLDAIPILT 642
           + ++R  +    ++S+ DAI  + 
Sbjct: 413 VELKRRATGEKVELSVEDAIARIA 436


>gi|162148795|ref|YP_001603256.1| prolyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
 gi|161787372|emb|CAP56967.1| Prolyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
          Length = 476

 Score =  211 bits (538), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 85/434 (19%), Positives = 151/434 (34%), Gaps = 39/434 (8%)

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEI 294
               E++   HR + R   +   A    G+  W   GW++ Q +   +R +      +E+
Sbjct: 51  ENPAEAQVISHRLMLRAGLIRQTAA---GIYAWLPAGWRVLQNIARIVREEQDAIGAQEL 107

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
             P V    LW++SG +D+Y   M  ++      +  R     P N      +F   +KS
Sbjct: 108 LMPTVQSAELWKRSGRYDAYGPEMLRIQD-----RHERELLYGPTNEEMITDLFGQVVKS 162

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIIS 413
           YRELP  L      +R+E      G+MR R F   DA+ F        +  + +    + 
Sbjct: 163 YRELPQVLYHIQWKFRDEVRPRF-GVMRGREFLMKDAYSFDLDYASAVDSYRRMMLAYLR 221

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE-- 471
            ++  G   I +   T P     S      A     GV        QD ++  V + +  
Sbjct: 222 TFQRLGVRAIPMVADTGPIGGELSHEFLILAPTGESGVFFDGAFEEQDWLSDPVDIDDRE 281

Query: 472 ---------GAFYGPKFEYILKDAI----------GRDWQCGTI-QVDFNLPSRFNAFYV 511
                     +FY    E   + A           GR  + G I           +    
Sbjct: 282 SLDAFFTRMTSFYAATDEKHDEAAWADVPAERRREGRGIEVGHIFHFGRKYTESMDITVS 341

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNLPLWL---SPIQAIVTTITSSAVEY 567
                  +P M    +   + R +  +IE +   N  +W    +P +A +  + +     
Sbjct: 342 GPDGAPLYPEMGSYGI--GVSRLVAAIIEASHDDNGIIWPDSVAPFRAAILNLKTGDAAC 399

Query: 568 AQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGST 627
                 +  +   S   D R E    K  +  +   P  +I G + A E  + ++R    
Sbjct: 400 DAICEQVYAAAPESFLYDDRGERAGVKFADADLMGHPWQVIVGPRGAKEGKVELKRRADG 459

Query: 628 TTQKVSLLDAIPIL 641
              ++S+ DA+  +
Sbjct: 460 ARFELSVDDALARI 473


>gi|209964526|ref|YP_002297441.1| prolyl-tRNA synthetase [Rhodospirillum centenum SW]
 gi|209957992|gb|ACI98628.1| prolyl-tRNA synthetase ProS [Rhodospirillum centenum SW]
          Length = 404

 Score =  211 bits (538), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 75/411 (18%), Positives = 137/411 (33%), Gaps = 35/411 (8%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
            I +  +G+  W   GW++ Q +   +R +      +E+  P +    LW+QSG +++Y 
Sbjct: 1   MIRQTSAGIYAWLPLGWRVLQKVAQIVREEQDRAGAQEMLMPTIQSADLWKQSGRYEAYG 60

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
             M  +    D     R     P N      +F   +KSY++LP  L      +R+E   
Sbjct: 61  KEMLRITDRHD-----REMLYGPTNEEMITDIFKTFVKSYKDLPKNLYHIQWKFRDEIRP 115

Query: 376 SLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              GLMR R F   D + F    E       ++    +  +   G + I ++  T P   
Sbjct: 116 RF-GLMRGREFLMKDNYSFDLDVEGAKLSYRRMFLAYLRTFARMGIKAIPMRADTGPIGG 174

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG---AF------YGPKFEYI--- 482
             S      AE     V    +    D +             F      Y    E     
Sbjct: 175 DLSHEFIILAETGESQVFCDRRWLELDVLAEAPAPDSDLKEFFDRYTSIYAATEEMHDAA 234

Query: 483 ---LKDAIGRDWQCGTIQVDFN-LPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGI 537
                    R  + G I            A       +   PV +    +G  + R +  
Sbjct: 235 KAPADLVTARGIEVGHIFYFGKKYSQPMEAIVAGPDGQ---PVTVEMGSYGIGVSRVVAA 291

Query: 538 MIENFKGNLPL-WLSPIQA---IVTTITSSAVEY---AQEIANLLKSHHLSIETDFRNET 590
           +IE       + W  P+      +  +     E     +++   L    + +  D RNE 
Sbjct: 292 IIEASHDEQGIIWPEPVAPFKLAIVNLKVDDAECSRVCEDLYARLSGAKVEVLYDDRNER 351

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
              K  +  +  +P  +  G +      + ++R  +    ++S+ DA+  +
Sbjct: 352 PGAKFADMDLIGVPWQLTVGPRGLKAGVVELKRRATGEKFELSVEDALARV 402


>gi|299135009|ref|ZP_07028200.1| prolyl-tRNA synthetase [Afipia sp. 1NLS2]
 gi|298589986|gb|EFI50190.1| prolyl-tRNA synthetase [Afipia sp. 1NLS2]
          Length = 445

 Score =  211 bits (536), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 82/430 (19%), Positives = 156/430 (36%), Gaps = 43/430 (10%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           +E+E   HR + R   +    ++ +G+  W   G+++ + +   +R +       E+  P
Sbjct: 16  KEAEIVSHRLMLRAGMMR---QEAAGIYAWLPLGFRVLKKIEKIVREEQDRAGAIELLMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW++SG +D+Y   M  ++      +  R     P N      +F   +KSYR 
Sbjct: 73  TLQLADLWRESGRYDAYGPEMLRIQD-----RHKRELLYGPTNEEMITEIFRAYVKSYRS 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYK 416
           LP+ L      +R+E      G+MR R F   DA+ F   E        K+    +  + 
Sbjct: 128 LPLNLYHIQWKFRDEQRPRF-GVMRGREFLMKDAYSFDIDEAAARLSYNKMFVAYLRTFA 186

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENI------MKGVLDTIKNSSQ---DRINTGV 467
             G + I ++  T P     S      AE         K VLD     +    D   T +
Sbjct: 187 RMGLKAIPMRAETGPIGGDLSHEFIVLAETGESGVFCNKDVLDLPVPGADVNYDGDLTPI 246

Query: 468 LLGEGAFYGPKFEYILKDAIGRD-----------WQCGTIQV-DFNLPSRFNAFYVNSHS 515
           +      Y    +        ++            + G I            A  V S  
Sbjct: 247 IKQWTELYAATEDVHDTARYEKEVPADKRVNTRGIEVGQIFYFGTKYSDSMKALVVGSDG 306

Query: 516 EKCHPVMIHRAVFGS-IERFIGIMIENFKGN----LPLWLSPIQAIVTTITSSAVEY--- 567
            +     IH   +G  + R +G +IE          P  ++P +  +  +   A +    
Sbjct: 307 AEK---PIHGGSYGIGVSRLVGAIIEACHDENGIQWPEEVAPFRVAILNLKQGAADTDTA 363

Query: 568 AQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGST 627
            +++   L +  + +  D  ++    K     +  IP  I+ G K  +E  + I++    
Sbjct: 364 CEKLYKELSAAGVDVLYDDTDQRPGGKFATADLIGIPWQILVGPKGLAEGKVEIKKRADG 423

Query: 628 TTQKVSLLDA 637
           + + +S+ +A
Sbjct: 424 SREMMSVDEA 433


>gi|167948462|ref|ZP_02535536.1| threonyl-tRNA synthetase [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 170

 Score =  210 bits (535), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 67/164 (40%), Positives = 104/164 (63%)

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           + L+D + R WQ GTIQ+DF++P R  A Y+   + K  PVM+HRAV GS+ERFIGI+IE
Sbjct: 1   FSLRDCLERVWQLGTIQLDFSMPERLGAHYIAEDNSKQVPVMLHRAVLGSLERFIGILIE 60

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           ++ G++PLWLSP+Q +V  IT    +YA+     L+     +E+D RNE I +KIREH++
Sbjct: 61  HYAGSMPLWLSPVQVVVMNITDRQAKYAENSVKALREAGFRVESDLRNEKIGFKIREHTL 120

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            ++P +++ GD+E  + S+ +R         + L + I  +  E
Sbjct: 121 MRVPYLLVVGDREMEQGSLAVRTRKGEDLGSMPLQEFIAKMAAE 164


>gi|114569925|ref|YP_756605.1| prolyl-tRNA synthetase [Maricaulis maris MCS10]
 gi|122316107|sp|Q0APX0|SYP_MARMM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|114340387|gb|ABI65667.1| prolyl-tRNA synthetase [Maricaulis maris MCS10]
          Length = 444

 Score =  210 bits (535), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 81/432 (18%), Positives = 152/432 (35%), Gaps = 36/432 (8%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
            ++E   H+ + R      I ++ +G+  W   G ++ + +   +R +       E+  P
Sbjct: 16  SDAEIVSHQLMLRAGM---IKQEAAGIYAWLPLGHRVLRKIEQIVREEQDRAGAVELLMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW++SG +D Y   M  +    D     R     P N      +F    KSY++
Sbjct: 73  TIQSADLWRESGRYDDYGDEMLRITDRHD-----RDMLFGPTNEEMITDIFRSYCKSYKD 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYK 416
           +P  L      +R+E      G+MR R F   DA+ F   E        ++    ++ + 
Sbjct: 128 VPKLLYHIQWKFRDERRPRF-GVMRGREFLMKDAYSFDVDEAAARRSYNRMFVAYLNTFA 186

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV-----LDTIKNSSQD----RINTGV 467
             G + + ++  T P     S      AE     V     L  +     D         +
Sbjct: 187 RLGLKAVPMQADTGPIGGDLSHEFIVLAETGESEVFCHADLVEMGAPGLDVDFDGDLQPL 246

Query: 468 LLGEGAFYGPKFEYILKD-----AIGRDWQCGTIQVDF--NLPSRFNA-FYVNSHSEKCH 519
           +    A Y    E    +        R      I+V    N  ++++         +   
Sbjct: 247 VDQRTALYAATEEMHQPEEFAAVPADRQLSARGIEVGHIFNFGTKYSEPMKATVQHQDGQ 306

Query: 520 PVMIHRAVFGS-IERFIGIMIE-NFKGNLPLWL---SPIQAIVT--TITSSAVEYAQEIA 572
           P  +H   +G  + R +G +IE +      +W    +P  A +    +   A + A E A
Sbjct: 307 PRPVHMGSYGVGVSRLLGAIIEAHHDEKGCIWPESVAPFGAGIINMRVGDEACDAACETA 366

Query: 573 -NLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
              L    L    D  +     K     +  +P  ++ G +   E  I ++   +  T +
Sbjct: 367 YQGLVKAGLDPLYDDTDSRAGAKFATADLIGLPYQLVVGPRGLKEGKIELKVRRTGETHE 426

Query: 632 VSLLDAIPILTK 643
           +S  DA+  L +
Sbjct: 427 MSPEDAVSRLAE 438


>gi|217976887|ref|YP_002361034.1| prolyl-tRNA synthetase [Methylocella silvestris BL2]
 gi|254782909|sp|B8EP84|SYP_METSB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|217502263|gb|ACK49672.1| prolyl-tRNA synthetase [Methylocella silvestris BL2]
          Length = 440

 Score =  210 bits (534), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 83/435 (19%), Positives = 155/435 (35%), Gaps = 37/435 (8%)

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEE 293
               +E+E   HR + R   +    ++ +G+  W   G ++ Q +   +R+++      E
Sbjct: 12  RENPKEAEIVSHRLMLRAGMIR---QEAAGIYSWLPLGLRVLQKVAEIVRQEMNRAGAIE 68

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           +  P +    LW+++G +++Y   M  +K      +  R     P N     A+F   ++
Sbjct: 69  LLMPTLQLADLWRETGRYEAYGPEMLRIKD-----RHEREMLYGPTNEDMITAIFRSYVR 123

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLII 412
           SYRELP  L      +R+E      G+MR R F   DA+ F   E        ++    +
Sbjct: 124 SYRELPKILYHIQWKFRDEQRPRF-GVMRGREFLMKDAYSFDVDEAAARLAYNRMFVSYL 182

Query: 413 SIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
            I+   G   I ++  T P     S      AE     V       +    +  +     
Sbjct: 183 RIFARMGLRVIPMRAETGPIGGDQSHEFIILAETGESAVYCDAGVLNLPIPDETIDYDGD 242

Query: 473 ---------AFYGPKFEYI------LKDAIGRDWQCGTI---QVDFNLPSRFNAFYVNSH 514
                    + Y    +        L+   G+  +   I   QV F           N  
Sbjct: 243 LSPIVKQWTSLYAATEDVHDAERFALETTEGQRIETRGIEVGQVFFFGDKYSKPMNANIA 302

Query: 515 SEKCHPVMIHRAVFGS-IERFIGIMIENFKGN----LPLWLSPIQAIV--TTITSSAVEY 567
                        +G  + R +G +IE          P  ++P +  +    +  +A + 
Sbjct: 303 GPDGVERPFQGGSYGVGVSRLVGALIEANHDEAGIIWPASVAPFKVGIANLKVGDAATDA 362

Query: 568 A-QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS 626
           A +++   L+   + +  D   +    K  +  +  +P   I G K  +E  I I+   S
Sbjct: 363 ACEKLLAALEKAGVDVLYDDSADRPGAKFAKLDLIGLPYQAIVGPKGLAEGKIEIKTRAS 422

Query: 627 TTTQKVSLLDAIPIL 641
               ++SL +AI  L
Sbjct: 423 GERVELSLDEAIERL 437


>gi|227821637|ref|YP_002825607.1| prolyl-tRNA synthetase [Sinorhizobium fredii NGR234]
 gi|227340636|gb|ACP24854.1| prolyl-tRNA synthetase [Sinorhizobium fredii NGR234]
          Length = 501

 Score =  210 bits (534), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 79/453 (17%), Positives = 154/453 (33%), Gaps = 54/453 (11%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +       +E+E   HR + R   +    +  +G+  W   G ++   + + +R +
Sbjct: 63  SRYFMPILKENPKEAEIVSHRLMLRTGMIR---QQSAGIYSWLPLGKRVLDKVNAIIREE 119

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
                  E+  P +    LWQ+SG +D+Y   M  +K   D     R     P N     
Sbjct: 120 QNRSGAVELLMPTLQSAELWQESGRYDAYGKEMLRIKDRQD-----RPMLYGPTNEEMIT 174

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +F   +KSYR LP+ L      +R+E      G MR R F   DA+ F    E   +  
Sbjct: 175 DIFRSSVKSYRNLPLNLYHIQLKFRDEIRPRF-GTMRSREFLMKDAYSFDLDREGAEHAY 233

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            K+    +  +   G   I ++  T P     S         I+    ++     +D + 
Sbjct: 234 NKMFAAYLRTFDRMGLRAIPMRADTGPIGGNLSHEF-----IILADTGESEVYCHKDFLG 288

Query: 465 TGVLLGEGAF----------------YGPKFEYILKDAIG----------RDWQCGTIQV 498
             +   +  F                Y    E   + A            R  + G I  
Sbjct: 289 FDIPGKDTNFDDVAGLKAIFDKWTSRYAATSEMHDEAAFDAISEGEKVSARGIEVGHIFY 348

Query: 499 -DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGNLPLWL---SP 552
                     A  +    ++    ++H   +G    R +  +IE +   N  +W    +P
Sbjct: 349 FGTKYSEAMGAKVLGPDGKEH---IVHMGSYGIGPTRLVPAIIEASHDENGIIWPKSVAP 405

Query: 553 IQAIVTTITSSAVEY---AQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIIC 609
             A+V  + +           + + L      +  D  ++    K     +  +P+ II 
Sbjct: 406 FDAVVINMKTGDAACDAACGTLYSDLGKAGFDVLLDDTDDRAGAKFATADLIGVPVQIIV 465

Query: 610 GDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           G +  +   + ++   +   + +++  AI  L 
Sbjct: 466 GPRSIANGEVEVKDRKTGERETMTVEAAINKLV 498


>gi|158423310|ref|YP_001524602.1| prolyl-tRNA synthetase [Azorhizobium caulinodans ORS 571]
 gi|172047938|sp|A8I438|SYP_AZOC5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|158330199|dbj|BAF87684.1| prolyl-tRNA synthetase [Azorhizobium caulinodans ORS 571]
          Length = 440

 Score =  210 bits (534), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 80/430 (18%), Positives = 145/430 (33%), Gaps = 44/430 (10%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
            HR + R   +    ++ +G+  W   G ++   + + +R +       E+  P +    
Sbjct: 22  SHRLMLRAGMIR---QESAGIYAWLPLGLRVLNKICNIIREEQNRTGAVELLMPTIQSAD 78

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SG +D Y   M  +K      +  R     P N      +    +KSY+ LP+ L 
Sbjct: 79  LWRESGRYDDYGKEMLRIKD-----RHERDMLFGPTNEEMITEIVRGSIKSYKSLPLNLY 133

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEK 422
                +R+E      G+ R R F   DA+ F    E   +   K+    +  +   G + 
Sbjct: 134 HIQWKFRDEVRPRF-GVYRSREFLMKDAYSFDLDAEGAKHSYNKMFVAYLRTFARMGLKA 192

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA--------- 473
           I +   T P     S      A      V               V   + A         
Sbjct: 193 IPMVADTGPIGGNLSHEFIILASTGESEVFCHGDYLEMAPPPADVNFDDAAAIQQVVNDW 252

Query: 474 --FYGPKFEYILKDAIG----------RDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHP 520
              Y    E                  R  + G I        + FNA  +     +   
Sbjct: 253 TTLYAATEEKHDAATFAAIPAERQMAARGIEVGHIFYFGTKYSAPFNAKVLGPDGAEH-- 310

Query: 521 VMIHRAVFGS-IERFIGIMIENFKGN----LPLWLSPIQAIVTT--ITSSAVEYA-QEIA 572
            +IH   +G    R +  MIE    +     P  ++P Q  +    +  SAV+ A  ++ 
Sbjct: 311 -LIHMGSYGIGPSRLVAAMIEASHDDAGIIWPDAVAPFQVGILNLKVGDSAVDAACADLY 369

Query: 573 NLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
             L +  + +  D  +E    K     +  +P  I+ G K  ++  + ++R    + + V
Sbjct: 370 AKLTAAGVDVLYDDTDERAGSKFATADLIGLPWQILVGPKSLADGKVELKRRVDGSRELV 429

Query: 633 SLLDAIPILT 642
           +  +A   L 
Sbjct: 430 TPAEAFERLK 439


>gi|162329642|ref|YP_469149.2| prolyl-tRNA synthetase [Rhizobium etli CFN 42]
 gi|114152238|sp|Q2K9R4|SYP_RHIEC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
          Length = 440

 Score =  210 bits (533), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 81/448 (18%), Positives = 154/448 (34%), Gaps = 44/448 (9%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +       +E+E   HR + R   +   ++   G+  W   G ++   + + +R +
Sbjct: 4   SRYFMPILKENPKEAEIVSHRLMLRAGMIRQQSQ---GIYSWLPLGKRVLDKVNAIIREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
                  E++ P +    LWQ+SG +D+Y   M  +K   D     R     P N     
Sbjct: 61  QNRAGAIELSMPTLQSAELWQESGRYDAYGKEMLRIKDRQD-----RPMLYGPTNEEMVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNEC 404
            +F   +KSY++LP+ L      +R+E      G MR R F   DA+ F  T+E   +  
Sbjct: 116 DIFRSSVKSYKDLPLNLYHIQLKFRDEIRPRF-GTMRSREFMMKDAYSFDLTREGAEHSY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL--DTIKNSSQDR 462
            K+    +  ++  G   I ++  T P     S      A+     V             
Sbjct: 175 NKMFAAYLRTFERLGLRAIPMRADTGPIGGNLSHEFIILADTGESEVFCHKDFVGFDIPG 234

Query: 463 INTGVLLGEG---------AFYGPKFEYILKDAIG----------RDWQCGTIQV-DFNL 502
            NT     EG         + Y    E   + A            R  + G I       
Sbjct: 235 ENTDFDSVEGLKAIFDKWTSLYAATSEMHDEAAFNAVPEGDRLSARGIEVGHIFYFGTKY 294

Query: 503 PSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN----LPLWLSPIQAIV 557
                A       ++     +H   +G    R +  +IE    +     P  ++P   +V
Sbjct: 295 SEPMGAKVQGPDGKEH---FVHMGSYGIGPTRLVPAIIEASHDDNGIIWPASVAPFDVVV 351

Query: 558 TTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
             +     +  +  + I   LK     +  D  ++    K     +  +P+ II G +  
Sbjct: 352 INMKVGDQACDDTCELIYAALKKAGKDVLYDDTDDRAGTKFATADLIGVPVQIIAGPRAV 411

Query: 615 SERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +   + ++   +   + +++  AI    
Sbjct: 412 ANGEVEVKDRKTGARETMTIEAAINRFV 439


>gi|197105248|ref|YP_002130625.1| prolyl-tRNA synthetase [Phenylobacterium zucineum HLK1]
 gi|226701316|sp|B4RBZ9|SYP_PHEZH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|196478668|gb|ACG78196.1| prolyl-tRNA synthetase [Phenylobacterium zucineum HLK1]
          Length = 439

 Score =  210 bits (533), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 84/447 (18%), Positives = 156/447 (34%), Gaps = 43/447 (9%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H+ + R   +    ++ +G+  W   G K+ + +   +R +
Sbjct: 4   SRYFMPTLREAPSDAQIVSHQLMLRAGMIR---QEAAGIYAWLPLGLKVLKKIEQVVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P +    LW++SG +D Y   M  +K      +  R     P       
Sbjct: 61  MDRAGAIEVLMPTLQLADLWRESGRYDDYGEEMLRIKD-----RHERDLLYGPTAEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +F   +KSY++LP  L      +R+E      G+MR R F   DA+ F   E       
Sbjct: 116 DIFRAYIKSYKDLPKNLYNIQWKFRDERRPRF-GVMRGREFLMKDAYSFDIDEAAARRAY 174

Query: 406 -KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV-----LDTIKNSS 459
            ++    +++Y   G + I V+  T P     S      A+     V     L  +    
Sbjct: 175 NRMFCAYLNVYARLGLKAIPVRADTGPIGGDLSHEFIILADTGESQVFAHRDLVEMGAPG 234

Query: 460 ----QDRINTGVLLGEGAFYGPKFEYILKDAI-----------GRDWQCGTIQVDFNLPS 504
                D     ++      Y    E   +               R  + G I       S
Sbjct: 235 PDIDWDGDLEPLVQQRTRLYAASDEMHDQARFETEAPEDKRMTARGIEVGHIFYFGEKYS 294

Query: 505 R-FNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN----LPLWLSPIQAIVT 558
           R  NA        +     +H   +G  + R +G +IE          P  ++P  A V 
Sbjct: 295 RPMNAKVAGPDGAER---FVHMGSYGVGVSRLVGAIIEASHDEAGIVWPDSVAPFGAAVV 351

Query: 559 ---TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEAS 615
                 ++    A++    L++       D R+E    K     +  +P  +I G K  +
Sbjct: 352 NLRPGEAAVDAVAEQAYGALQAAGKEPLLDDRDERPGAKFASLDLVGVPWQLIVGPKGVA 411

Query: 616 ERSIGIRRFGSTTTQKVSLLDAIPILT 642
           E  + I+R  +   Q + L  A+  +T
Sbjct: 412 EGVVEIKRRATGERQTLPLDAALKAIT 438


>gi|86749715|ref|YP_486211.1| prolyl-tRNA synthetase [Rhodopseudomonas palustris HaA2]
 gi|114152241|sp|Q2IWW0|SYP_RHOP2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|86572743|gb|ABD07300.1| prolyl-tRNA synthetase [Rhodopseudomonas palustris HaA2]
          Length = 439

 Score =  210 bits (533), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 78/437 (17%), Positives = 159/437 (36%), Gaps = 41/437 (9%)

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEI 294
              +E+E   HR + R   L    ++ +G+  W   G ++ + +   +R +       E+
Sbjct: 13  ENPKEAEIVSHRLMLRAGMLR---QEAAGIYAWLPLGHRVLKKIEQIVREEQNRAGAIEL 69

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
             P +    LW++SG +D+Y   M  +     + +  R     P N      +F   +KS
Sbjct: 70  LMPTLQLADLWRESGRYDAYGPEMLRI-----SDRHKRELLYGPTNEEMITEIFRAYVKS 124

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIIS 413
           Y+ LP+ L      +R+E      G+MR R F   DA+ F   E    +   ++    + 
Sbjct: 125 YKSLPLNLYHIQWKFRDEQRPRF-GVMRGREFLMKDAYSFDVDEAAARKSYNRMFVAYLR 183

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG- 472
            +   G + I ++  T P     S      AE    GV       S    +  V      
Sbjct: 184 TFARMGLKAIPMRAETGPIGGDLSHEFIVLAETGESGVYCDRDVLSLPVPDETVDYDGDL 243

Query: 473 --------AFYGPKFEYILKDAIGRDWQCGTI-----------QVDFNLPSRFNAFYVNS 513
                   + Y    +    DA+  + +               Q+ +      ++   N 
Sbjct: 244 TPIIKQWTSVYAATEDVH--DAVRYESEVPEANRLHTRGIEVGQIFYFGTKYSDSMKANV 301

Query: 514 HSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN----LPLWLSPIQAIVTTI--TSSAVE 566
                    IH   +G  + R +G +IE    +     P  ++P +  +  +    +A +
Sbjct: 302 AGPDGTDAPIHGGSYGVGVSRLVGAIIEACHDDNGIIWPEEVAPFRVAILNLKQGDAATD 361

Query: 567 YA-QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
            A +++   L +  + +  D  ++    K     +  IP  ++ G K  ++  I ++R  
Sbjct: 362 AACEQLYKELAAKGVDVLYDDTDQRAGAKFATADLIGIPWQVLVGPKGLADGKIELKRRS 421

Query: 626 STTTQKVSLLDAIPILT 642
             + + ++L + +  L 
Sbjct: 422 DGSRENIALAETVARLA 438


>gi|325292651|ref|YP_004278515.1| Prolyl-tRNA synthetase [Agrobacterium sp. H13-3]
 gi|325060504|gb|ADY64195.1| Prolyl-tRNA synthetase [Agrobacterium sp. H13-3]
          Length = 477

 Score =  210 bits (533), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 83/445 (18%), Positives = 153/445 (34%), Gaps = 40/445 (8%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +       +E+E   HR + R   +    +  +G+  W   G ++   +   +R +
Sbjct: 41  SRYFMPILKENPKEAEIVSHRLMLRAGMIR---QQSAGIYSWLPLGKRVLDKVNRIIREE 97

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
                  E+  P +    LWQ+SG +D Y   M  +K   D     R     P N     
Sbjct: 98  QDRSGAIELLMPTLQTAELWQESGRYDDYGKEMLRIKDRQD-----RQMLYGPTNEEMIT 152

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNEC 404
            +F   +KSY+ LP+ L      +R+E      G MR R F   DA+ F  TKE   +  
Sbjct: 153 DIFRSYVKSYKNLPLNLYHIQLKFRDEVRPRF-GTMRSREFLMKDAYSFDLTKEDAIHSY 211

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV------LDTIKNS 458
            K+    +  ++  G   I ++  T P     S      A+     V      LD    +
Sbjct: 212 NKMFVAYLRTFERLGLRAIPMRADTGPIGGNHSHEFIILADTGESEVFCHKSFLDRAIPA 271

Query: 459 SQDRINT-----GVLLGEGAFYGPKFEYILKDAIG----------RDWQCGTIQV-DFNL 502
                +      GV     A Y    E   + A            R  + G I       
Sbjct: 272 DDTNFDDVAALQGVFDEWTADYAATSEMHDEAAYDAIPDGQRLSARGIEVGHIFYFGTKY 331

Query: 503 PSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLS---PIQAIVTT 559
                A    +   K HPV +     G       I+  +   N  +W +   P   ++  
Sbjct: 332 SEPMGAKVQGADG-KEHPVHMGSYGIGPTRLVPAIIEASHDENGIIWPASVAPFDVVIIN 390

Query: 560 ITSSAVEYA---QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASE 616
           + +         +++   L +    +  D  ++    K     +  +P+ II G + A+ 
Sbjct: 391 MKAGDAACDAACEKLYYSLSNAGKDVLYDDTDDRAGQKFATADLIGVPMQIIVGPRSAAN 450

Query: 617 RSIGIRRFGSTTTQKVSLLDAIPIL 641
             + ++   +   + V++  A+  +
Sbjct: 451 GEVEVKDRKTGDRETVTIEAAMNRV 475


>gi|114316122|gb|ABI62182.1| prolyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1]
          Length = 499

 Score =  209 bits (532), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 82/468 (17%), Positives = 164/468 (35%), Gaps = 43/468 (9%)

Query: 208 WRGDSNRPMLSRIYGTAWN---TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSG 264
           WR +     + R++ T      ++  +        E++   HR + R      I ++ +G
Sbjct: 41  WRQERGNCRVRRLFVTDEPMRLSRALIPTLKETPAEAQIASHRLMLRAG---LIQQEAAG 97

Query: 265 VIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKC 323
           +  W   G ++   + + +R  +     +E+  P +    LW++SG +D+Y   M  +K 
Sbjct: 98  IYAWLPAGLRVLNAIANIVRDEQAGIGAQEVLMPTIQSADLWRESGRYDAYGPEMLRLKD 157

Query: 324 ADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRV 383
                +  R     P N      ++ H +KSYRELP    +    +R+E      G+MR 
Sbjct: 158 -----RHERDLLYGPTNEEVITDIYRHSVKSYRELPQMAYQIQWKFRDEIRPRF-GVMRG 211

Query: 384 RGFTQDDAHVFCTKEQMFNECLKIHNL-IISIYKDFGFEKIMVKLSTRPEKRVGSDAL-- 440
           R F   D + F           +   L  +  ++  G + I +   T P     S     
Sbjct: 212 REFLMKDGYSFDLDYAGAVRSYRRIMLSYMRTFQRLGVKAIPMLADTGPIGGDLSHEFII 271

Query: 441 ---WDDAENIMKGVLDTIKNSSQ-DRINTGVLLGEGA-----FYGPKFEYILKDAI---- 487
                ++E       + I  S     +++   L          Y    E     A     
Sbjct: 272 LAPTGESEVFYDAAFEEIDWSGASFNVDSDADLERFFQTITGHYAATDEKHDTAAYEALP 331

Query: 488 ------GRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
                 GR  + G I           N        +K HP M    +   + R +  +IE
Sbjct: 332 EARRRTGRGIEVGHIFYFGTKYSKALNMTVAGRDGQKLHPEMGSYGI--GVSRMVAAVIE 389

Query: 541 NFKGN----LPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLS-IETDFRNETINYKI 595
                     P  ++P +A V  + +          ++ +   +     D R+E    K 
Sbjct: 390 ASHDEAGIIWPDSIAPFRAAVLNLKNGDAACDAMAEDVYRRIGVRHALYDDRDERAGVKF 449

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +  +   P  ++ G + A+   + ++R  +    ++++ DA+  + +
Sbjct: 450 ADADLMGHPWQVVIGPRGAAAGRVELKRRRTGERVELTVEDALARIRE 497


>gi|330977709|gb|EGH77612.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. aptata str. DSM
           50252]
          Length = 174

 Score =  209 bits (532), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 65/163 (39%), Positives = 103/163 (63%)

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           + LKD +GR WQCGT+Q+DFNLP R +A YV+  + + +PVM+HRA+ GS ERFIGI+IE
Sbjct: 1   FCLKDCLGRVWQCGTLQLDFNLPIRLSAEYVSEDNSRKNPVMLHRAILGSFERFIGILIE 60

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +++G  P WL+P QA++  IT    ++A E+   L       ++D RNE I +KIREH++
Sbjct: 61  HYEGAFPAWLAPTQAVIMNITDKQADFALEVEKTLAESGFRAKSDLRNEKIGFKIREHTL 120

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            K+P +++ GD+E   +++ +R         + +      L +
Sbjct: 121 LKVPYLLVIGDREVEMQTVAVRTREGADLGSMPVAQFAEFLAQ 163


>gi|209545456|ref|YP_002277685.1| prolyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
 gi|209533133|gb|ACI53070.1| prolyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
          Length = 438

 Score =  209 bits (532), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 85/434 (19%), Positives = 151/434 (34%), Gaps = 39/434 (8%)

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEI 294
               E++   HR + R   +   A    G+  W   GW++ Q +   +R +      +E+
Sbjct: 13  ENPAEAQVISHRLMLRAGLIRQTAA---GIYAWLPAGWRVLQNIARIVREEQDAIGAQEL 69

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
             P V    LW++SG +D+Y   M  ++      +  R     P N      +F   +KS
Sbjct: 70  LMPTVQSAELWKRSGRYDAYGPEMLRIQD-----RHERELLYGPTNEEMITDLFGQVVKS 124

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIIS 413
           YRELP  L      +R+E      G+MR R F   DA+ F        +  + +    + 
Sbjct: 125 YRELPQVLYHIQWKFRDEVRPRF-GVMRGREFLMKDAYSFDLDYASAVDSYRRMMLAYLR 183

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE-- 471
            ++  G   I +   T P     S      A     GV        QD ++  V + +  
Sbjct: 184 TFQRLGVRAIPMVADTGPIGGELSHEFLILAPTGESGVFFDGAFEEQDWLSDPVDIDDRE 243

Query: 472 ---------GAFYGPKFEYILKDAI----------GRDWQCGTI-QVDFNLPSRFNAFYV 511
                     +FY    E   + A           GR  + G I           +    
Sbjct: 244 SLDAFFTRMTSFYAATDEKHDEAAWADVPAERRREGRGIEVGHIFHFGRKYTESMDITVS 303

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNLPLWL---SPIQAIVTTITSSAVEY 567
                  +P M    +   + R +  +IE +   N  +W    +P +A +  + +     
Sbjct: 304 GPDGAPLYPEMGSYGI--GVSRLVAAIIEASHDDNGIIWPDSVAPFRAAILNLKTGDAAC 361

Query: 568 AQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGST 627
                 +  +   S   D R E    K  +  +   P  +I G + A E  + ++R    
Sbjct: 362 DAICEQVYAAAPESFLYDDRGERAGVKFADADLMGHPWQVIVGPRGAKEGKVELKRRADG 421

Query: 628 TTQKVSLLDAIPIL 641
              ++S+ DA+  +
Sbjct: 422 ARFELSVDDALARI 435


>gi|323139097|ref|ZP_08074155.1| prolyl-tRNA synthetase [Methylocystis sp. ATCC 49242]
 gi|322395661|gb|EFX98204.1| prolyl-tRNA synthetase [Methylocystis sp. ATCC 49242]
          Length = 447

 Score =  209 bits (532), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 78/438 (17%), Positives = 146/438 (33%), Gaps = 46/438 (10%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           +E+E   HR + R   +    ++ +G+  W   G K+   +   +R +       E   P
Sbjct: 16  KEAEIVSHRLMLRAGLIR---QESAGIYAWLPLGLKVLNNITRIIREEQNRAGAIECLMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW++SG +D+Y   M  +    D     R     P N      +F   ++SY++
Sbjct: 73  TIQSADLWRESGRYDAYGKEMLRITDRHD-----REMLFGPTNEEMITEIFRAYVRSYKD 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYK 416
           LP+ L      +R+E      G+MR R F   DA+ F  T E   +   ++    +  + 
Sbjct: 128 LPLNLYHIQWKFRDEVRPRF-GVMRSREFLMKDAYSFDLTAEAGRHSYNRMFVAYLRTFA 186

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKG-----------------------VLD 453
             G   I +   + P     S      AE                             L+
Sbjct: 187 RMGLTAIPMAAESGPIGGNLSHEFIILAETGESEVFCHKDFLSFAPPPANVDFDDAPALE 246

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS 513
            I      R      + + A Y    E     A G +                 A     
Sbjct: 247 EIVGKWTSRYAATSEMHDAAAYEAVPEASRVSARGIEV-GHIFYFGTKYSEPMKAVVNGP 305

Query: 514 HSEKCHPVMIHRAVFGS-IERFIGIMIENFKGNLPL-WLSPIQAIVTTITSSAVEYAQ-- 569
             ++   V++    +G    R +  +IE       + W   +      +    V  A   
Sbjct: 306 DGKE---VVVQMGSYGIGPSRLVAAIIEAGHDEAGIVWPEQVAPFHVGVADLKVGDANTG 362

Query: 570 ----EIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
               ++   L++  L +  D R+E    K     +  +P  I+ G K  +E  + ++R  
Sbjct: 363 RVCGDLVQQLENAGLDVLHDDRDERPGAKFATLDLIGLPWQILVGPKGLAEGRVEVKRRR 422

Query: 626 STTTQKVSLLDAIPILTK 643
           +   + +S  D +  + +
Sbjct: 423 TGERELLSPEDVVARIVE 440


>gi|254502934|ref|ZP_05115085.1| prolyl-tRNA synthetase [Labrenzia alexandrii DFL-11]
 gi|222439005|gb|EEE45684.1| prolyl-tRNA synthetase [Labrenzia alexandrii DFL-11]
          Length = 442

 Score =  209 bits (532), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 72/433 (16%), Positives = 155/433 (35%), Gaps = 40/433 (9%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
           +E+E   HR + R   +    +  +G+  W   G K+ + +   +  +  +    ++  P
Sbjct: 16  KEAEIVSHRLMLRAGMIR---QQSAGIYSWLPLGLKVLRKIERIVEEEQARAGAVQLLMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW++SG +D+Y   M  +     T +  R     P N      +F   ++SY++
Sbjct: 73  TIQPADLWRESGRYDAYGKEMLRI-----TDRHEREMLFGPTNEEMITDIFRSYVRSYKD 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYK 416
           LP+ L      +R+E      G+MR R F   DA+ F    E   +   ++    +  + 
Sbjct: 128 LPLNLYHIQWKFRDEVRPRF-GIMRGREFLMKDAYSFDLDQETARHAYNRMFVAYLRTFD 186

Query: 417 DFGFEKIMVKLSTRPEKRVGSDAL-----WDDAENIMKGVLDTIKNSSQDRINT----GV 467
             G + I +K  T P     S          ++E  +   L  +   ++D         +
Sbjct: 187 RMGLKAIPMKADTGPIGGDLSHEFIILAETGESEVFLDKSLLEMPIPAKDTDFWSDLSPI 246

Query: 468 LLGEGAFYGPKFEYILKDAIG----------RDWQCGTIQVDFNLPSRFNAFYVNSHSEK 517
           +      Y    E   + A G          R  + G I          +A      + +
Sbjct: 247 VESWTTPYAATDEMHDEAAFGALEEDTRVSARGIEVGHIFYFG--TKYSDAMGAKVATAE 304

Query: 518 CHPVMIHRAVFGS-IERFIGIMIE-NFKGNLPLWL---SPIQAIVT---TITSSAVEYAQ 569
              V +H   +G  + R +G +IE N   +  +W    +P    +              +
Sbjct: 305 GTEVPVHMGSYGVGVSRLLGALIEANHDEDGIIWPKSVAPFHVGIINMRPGDDLTDPVCE 364

Query: 570 EIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           ++   L++  + +  D  +     K     +  +P  ++ G +   +  + ++   +   
Sbjct: 365 DLYAKLEAAGIEVLYDDTDSRAGAKFATMDLIGLPFQVVAGPRGLKDGVLEVKDRATGEK 424

Query: 630 QKVSLLDAIPILT 642
           + ++    +  LT
Sbjct: 425 EMLTPEATLNKLT 437


>gi|220924023|ref|YP_002499325.1| prolyl-tRNA synthetase [Methylobacterium nodulans ORS 2060]
 gi|254782908|sp|B8IUW4|SYP_METNO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|219948630|gb|ACL59022.1| prolyl-tRNA synthetase [Methylobacterium nodulans ORS 2060]
          Length = 443

 Score =  209 bits (532), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 81/435 (18%), Positives = 151/435 (34%), Gaps = 42/435 (9%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTP 297
           +E+E   HR + R   +    ++ +G+  W   G ++   +   +R  + +    E+  P
Sbjct: 16  KEAEIVSHRLMLRAGMIR---QEAAGIYAWLPLGLRVLNRVTEVIRAEQDRSGAIELLMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW++SG +++Y   M  ++      +  R     P N     A+F   ++SY++
Sbjct: 73  TIQSAELWRESGRYEAYGKEMLRIRD-----RHEREMLFGPTNEEMITAIFRSAVRSYKD 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYK 416
           LP  L      +R+E      G MR R F   DA+ F   E        K+    +  + 
Sbjct: 128 LPKNLYHIQWKFRDEVRPRF-GTMRSREFLMKDAYSFDLDEAGARHAYNKMFVAYLRTFA 186

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF-- 474
             G + I ++  T P     S      A+     V               +   + A   
Sbjct: 187 RLGLKAIPMRAETGPIGGNLSHEFIILAQTGESEVFCDRAYLGFPIPPASIDFDDVAALQ 246

Query: 475 ---------YGPKFEYILKDA----------IGRDWQCGTIQV-DFNLPSRFNAFYVNSH 514
                    Y    E     A            R  + G I            A      
Sbjct: 247 ATVDHWTSRYAATSEMHEPAAFEAVPEEARMAARGIEVGHIFYFGTKYSEPMGARVTGPD 306

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTT--ITSSAVEYA 568
            +   PV +     G   R +  +IE          P  ++P    +    +  +A + A
Sbjct: 307 GQ-ERPVHMGSYGIG-PSRLVAAIIEASHDEAGIVWPDSVAPFDVALLNLKVGDAATDAA 364

Query: 569 -QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGST 627
             ++   L++  L++ TD R+E    K     +  +P  +I G K  +E +I ++R  + 
Sbjct: 365 CAKLQEELEAAGLTVLTDDRDERPGAKFATADLIGLPWQVIVGPKGLAEGTIELKRRATG 424

Query: 628 TTQKVSLLDAIPILT 642
             + V++    P L 
Sbjct: 425 EREIVAVDAVAPRLR 439


>gi|14521178|ref|NP_126653.1| prolyl-tRNA synthetase [Pyrococcus abyssi GE5]
 gi|74581662|sp|Q9V022|SYP_PYRAB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|5458396|emb|CAB49884.1| proS prolyl-tRNA synthetase [Pyrococcus abyssi GE5]
          Length = 480

 Score =  209 bits (532), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 76/424 (17%), Positives = 159/424 (37%), Gaps = 58/424 (13%)

Query: 234 YLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYE 292
                 E+      ++  E  +        G+  W   G KI + +  ++  +++   ++
Sbjct: 3   ERKRWSENFSEWFNEVIEEAGILDKRYPVKGMNVWLPYGLKIMKNIEKFIHEEMERTGHQ 62

Query: 293 EINTPQVLDQ-HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           E+  P ++ +    +++ H   +   +F +  A     D++   L+P +     ++F   
Sbjct: 63  EVLFPALIPETEFKKEAEHIAGFEGEVFWITHAGHEPLDVK-LILRPTSETAMYSMFALW 121

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT-QDDAHVFCTK-EQMFNECLKIHN 409
           ++S+ +LP ++ +  +VYR E       L+RVR  +   +AH      E    +  +   
Sbjct: 122 IRSHADLPFKVYQIVNVYRYETK-HTRPLIRVREISRFFEAHTAHADFEDAERQIKEDLE 180

Query: 410 LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL 469
           +  ++ K      I+ K              WD                           
Sbjct: 181 IFDNLMKRLAIAYIISKRPE-----------WDKF------------------------- 204

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF-NAFYVNSHSEKCHPVMIHRAVF 528
             GAFY    E ++ D  GR  Q GT+    N    F  A+ +    E      +H+  F
Sbjct: 205 -PGAFYSLGAEVVMPD--GRTLQIGTMH---NYKQNFAKAYNILYEKEDGTHDYVHQTTF 258

Query: 529 GSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSS-----AVEYAQEIANLLKSHH 579
           G  ER +  +I    ++    LP  ++PIQ ++  I          EYA+EI   L++  
Sbjct: 259 GMSERLLAAVIAIHGDDRGMVLPPTIAPIQVVIVPIPKKEKQEIVYEYAREIEEELRTAG 318

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
           + +  D R +   +K  +  +K +P+ I  G ++    ++ + R        +   + + 
Sbjct: 319 IRVHLDMREKRPGWKFYDWELKGVPVRIEVGPRDVENSTVVLARRDKLEKITIKREELVD 378

Query: 640 ILTK 643
            + +
Sbjct: 379 KVRE 382


>gi|118138193|pdb|2I4L|A Chain A, Rhodopseudomonas Palustris Prolyl-Trna Synthetase
 gi|118138194|pdb|2I4L|B Chain B, Rhodopseudomonas Palustris Prolyl-Trna Synthetase
 gi|118138195|pdb|2I4L|C Chain C, Rhodopseudomonas Palustris Prolyl-Trna Synthetase
 gi|118138196|pdb|2I4M|A Chain A, Rhodopseudomonas Palustris Prolyl-Trna Synthetase In
           Complex With Proams
 gi|118138197|pdb|2I4M|B Chain B, Rhodopseudomonas Palustris Prolyl-Trna Synthetase In
           Complex With Proams
 gi|118138198|pdb|2I4M|C Chain C, Rhodopseudomonas Palustris Prolyl-Trna Synthetase In
           Complex With Proams
 gi|118138199|pdb|2I4N|A Chain A, Rhodopseudomonas Palustris Prolyl-Trna Synthetase In
           Complex With Cysams
 gi|118138200|pdb|2I4N|B Chain B, Rhodopseudomonas Palustris Prolyl-Trna Synthetase In
           Complex With Cysams
 gi|118138201|pdb|2I4N|C Chain C, Rhodopseudomonas Palustris Prolyl-Trna Synthetase In
           Complex With Cysams
 gi|118138202|pdb|2I4O|A Chain A, Rhodopseudomonas Palustris Prolyl-Trna Synthetase In
           Complex With Atp
 gi|118138203|pdb|2I4O|B Chain B, Rhodopseudomonas Palustris Prolyl-Trna Synthetase In
           Complex With Atp
 gi|118138204|pdb|2I4O|C Chain C, Rhodopseudomonas Palustris Prolyl-Trna Synthetase In
           Complex With Atp
          Length = 458

 Score =  209 bits (531), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 81/435 (18%), Positives = 158/435 (36%), Gaps = 37/435 (8%)

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEI 294
              +E+E   HR + R   L    ++ +G+  W   G ++ + +   +R +       E+
Sbjct: 33  ENPKEAEIVSHRLMLRAGMLR---QEAAGIYAWLPLGHRVLKKIEQIVREEQNRAGAIEL 89

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
             P +    LW++SG +D+Y   M  +       +  R     P N      +F   +KS
Sbjct: 90  LMPTLQLADLWRESGRYDAYGPEMLRI-----ADRHKRELLYGPTNEEMITEIFRAYIKS 144

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIIS 413
           Y+ LP+ L      +R+E      G+MR R F   DA+ F   E    +   K+    + 
Sbjct: 145 YKSLPLNLYHIQWKFRDEQRPRF-GVMRGREFLMKDAYSFDVDEAGARKSYNKMFVAYLR 203

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN------IMKGVLDT---IKNSSQDRIN 464
            +   G + I ++  T P     S      AE       I + VL+     +N   D   
Sbjct: 204 TFARMGLKAIPMRAETGPIGGDLSHEFIVLAETGESGVYIDRDVLNLPVPDENVDYDGDL 263

Query: 465 TGVLLGEGAFYGPKFEYILKDAIGRDWQ---------CGTIQVDFNLPSRFNAFYVNSHS 515
           T ++    + Y    +         +               Q+ +      ++   N   
Sbjct: 264 TPIIKQWTSVYAATEDVHEPARYESEVPEANRLNTRGIEVGQIFYFGTKYSDSMKANVTG 323

Query: 516 EKCHPVMIHRAVFGS-IERFIGIMIENFKGN----LPLWLSPIQAIVTTI--TSSAVEYA 568
                  IH   +G  + R +G +IE    +     P  ++P +  +  +    +A + A
Sbjct: 324 PDGTDAPIHGGSYGVGVSRLLGAIIEACHDDNGIIWPEAVAPFRVTILNLKQGDAATDAA 383

Query: 569 -QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGST 627
             ++   L +  + +  D  ++    K     +  IP  I  G +  +E  + ++R    
Sbjct: 384 CDQLYRELSAKGVDVLYDDTDQRAGAKFATADLIGIPWQIHVGPRGLAEGKVELKRRSDG 443

Query: 628 TTQKVSLLDAIPILT 642
             + ++L D +  LT
Sbjct: 444 ARENLALADVVARLT 458


>gi|241761006|ref|ZP_04759095.1| prolyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC
           10988]
 gi|260753028|ref|YP_003225921.1| prolyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
 gi|241374625|gb|EER64086.1| prolyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC
           10988]
 gi|258552391|gb|ACV75337.1| prolyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
          Length = 443

 Score =  209 bits (531), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 82/442 (18%), Positives = 153/442 (34%), Gaps = 48/442 (10%)

Query: 234 YLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYE 292
                 +++   H+ + R   +   A    G+  W   G ++ + +   +R +  +    
Sbjct: 11  MKETPADAQIISHKLMLRAGMIRQTAA---GIYAWLPLGLRVLRRIEKIIREEQARAGAL 67

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +    LW++SG +D+Y   M  +K      +  R     P N     A+    L
Sbjct: 68  ELLMPTLQTADLWRESGRYDAYGPEMLRIKD-----RHNRELLYGPTNEEMITALIRDNL 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM-FNECLKIHNLI 411
           +SYR+LP         +R+E      G+MR R F   DA+ F   E    +   ++    
Sbjct: 123 QSYRDLPRIFYHIQWKFRDEVRPRF-GVMRGREFLMKDAYSFDIDETAGRHNYNRMFVAY 181

Query: 412 ISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
           ++ +   G   I ++  T P   +G D   +       G  D   +S+ ++    +   E
Sbjct: 182 LNSFSRLGLRAIPMQADTGP---IGGDLSHEFIVLAPNGESDVFYHSNWEQPTRHI---E 235

Query: 472 GAFYGPKF-----------------------EYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
             F  PK                        E    D + +        + F        
Sbjct: 236 ADFDDPKALQSIVNDHISDYAATDEKRDPLREAQAGDKLRQSRGIEVGHIFFFGTKYSKP 295

Query: 509 FYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN----LPLWLSPIQAIVTT---I 560
                      P+ I    +G  I R +G +IE    +     P  ++P    +      
Sbjct: 296 MGFTLPGPDGKPIPIQMGSYGIGISRLLGAIIEASHDDNGIIWPEAVAPYHVGLINLRID 355

Query: 561 TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
             +    A  +   L++  +    D RNE    K     +  +P  ++ G K A +  + 
Sbjct: 356 DENCRAIADSLYQRLEAAGIDTLYDDRNERGGAKFATMDLIGLPWQVVIGPKGAEKGVVE 415

Query: 621 IRRFGSTTTQKVSLLDAIPILT 642
           ++   S   Q +S+ DA  +LT
Sbjct: 416 LKNRASGEKQTISVEDAFNLLT 437


>gi|192291648|ref|YP_001992253.1| prolyl-tRNA synthetase [Rhodopseudomonas palustris TIE-1]
 gi|226701325|sp|B3Q7L2|SYP_RHOPT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|192285397|gb|ACF01778.1| prolyl-tRNA synthetase [Rhodopseudomonas palustris TIE-1]
          Length = 438

 Score =  209 bits (531), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 81/435 (18%), Positives = 159/435 (36%), Gaps = 37/435 (8%)

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEI 294
              +E+E   HR + R   L    ++ +G+  W   G ++ + +   +R +       E+
Sbjct: 13  ENPKEAEIVSHRLMLRAGMLR---QEAAGIYAWLPLGHRVLKKIEQIVREEQNRAGAIEL 69

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
             P +    LW++SG +D+Y   M  +       +  R     P N      +F   +KS
Sbjct: 70  LMPTLQLADLWRESGRYDAYGPEMLRI-----ADRHKRELLYGPTNEEMITEIFRAYIKS 124

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIIS 413
           Y+ LP+ L      +R+E      G+MR R F   DA+ F   E    +   K+    + 
Sbjct: 125 YKSLPLNLYHIQWKFRDEQRPRF-GVMRGREFLMKDAYSFDVDEAGARKSYNKMFVAYLR 183

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN------IMKGVLDT---IKNSSQDRIN 464
            +   G + I ++  T P     S      AE       I + VL+     +N   D   
Sbjct: 184 TFARMGLKAIPMRAETGPIGGDLSHEFIVLAETGESGVYIDRDVLNLPVPDENVDYDGDL 243

Query: 465 TGVLLGEGAFYGPKFEYILKDAIGRDWQ---------CGTIQVDFNLPSRFNAFYVNSHS 515
           T ++    + Y    +         +               Q+ +      ++   N   
Sbjct: 244 TPIIKQWTSVYAATEDVHEPARYESEVPEANRLNTRGIEVGQIFYFGTKYSDSMKANVTG 303

Query: 516 EKCHPVMIHRAVFGS-IERFIGIMIENFKGN----LPLWLSPIQAIVTTI--TSSAVEYA 568
                  IH   +G  + R +G +IE    +     P  ++P +  +  +    +A + A
Sbjct: 304 PDGTDAPIHGGSYGVGVSRLLGAIIEACHDDNGIIWPEAVAPFRVTILNLKQGDAATDAA 363

Query: 569 -QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGST 627
             ++   L +  + +  D  ++    K     +  IP  I  G +  +E  + ++R    
Sbjct: 364 CDQLYRELSAKGVDVLYDDTDQRAGAKFATADLIGIPWQIHVGPRGLAEGKVELKRRSDG 423

Query: 628 TTQKVSLLDAIPILT 642
           + + ++L D +  LT
Sbjct: 424 SRENLALADVVARLT 438


>gi|153009733|ref|YP_001370948.1| prolyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188]
 gi|166980136|sp|A6X1L5|SYP_OCHA4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|151561621|gb|ABS15119.1| prolyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188]
          Length = 442

 Score =  209 bits (531), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 78/447 (17%), Positives = 151/447 (33%), Gaps = 54/447 (12%)

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEI 294
              +E+E   HR + R   +    +  +G+  W   G K+   +   +R +       EI
Sbjct: 13  ENPKEAEIVSHRLMLRSGMIR---QQSAGIYSWLPIGLKVLNKVCDIIREEQNRAGANEI 69

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
             P +    LW++SG +D+Y   M  ++      +  R     P N      +F   ++S
Sbjct: 70  LMPTIQSADLWRESGRYDAYGKEMLRIQD-----RQERDMLFGPTNEEMVTDIFRSYVRS 124

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIIS 413
           Y++LP+ L      +R+E      G+MR R F   DA+ F    E       ++    + 
Sbjct: 125 YKDLPLNLYHIQWKFRDEVRPRF-GVMRSREFLMKDAYSFDLDYEGAKMAYYRMFVSYLR 183

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
            +   G + I ++  T P     S      AE       ++     +  ++  V   +  
Sbjct: 184 TFARVGLQAIPMRADTGPIGGDLSHEFIILAETG-----ESQVFCDKAYLDLAVPGADTD 238

Query: 474 F----------------YGPKFEYILKDAIG----------RDWQCGTI-QVDFNLPSRF 506
           F                Y    E   +              R  + G I           
Sbjct: 239 FRNDAQLTDIVNRWTTPYAATDEMHDEADWSKVKPEDQVSARGIEVGHIFHFGTKYSEPM 298

Query: 507 NAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN----LPLWLSPIQAIVT--- 558
            A       ++    ++    +G    R +   IE F  +     P  ++P  A +    
Sbjct: 299 GAKVQGPDGKEH---LVSMGSYGIGPSRLVAAAIEAFHDDAGIIWPKAIAPFGAGIVNMK 355

Query: 559 TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERS 618
                    +++I   L +  +    D  ++    K     +  +P  +I G +  +   
Sbjct: 356 PGDEGCDAVSEKIYEALTNAGVDPLLDDTDDRPGAKFATMDLIGLPTQVIVGPRGVAAGE 415

Query: 619 IGIRRFGSTTTQKVSLLDAIPILTKES 645
           + I+   +   Q +S+  AI +LT E+
Sbjct: 416 VEIKDRKTGERQSLSVEAAINLLTAEA 442


>gi|15965039|ref|NP_385392.1| prolyl-tRNA synthetase [Sinorhizobium meliloti 1021]
 gi|307301111|ref|ZP_07580880.1| prolyl-tRNA synthetase [Sinorhizobium meliloti BL225C]
 gi|307317844|ref|ZP_07597282.1| prolyl-tRNA synthetase [Sinorhizobium meliloti AK83]
 gi|81854328|sp|Q92QN2|SYP_RHIME RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|15074218|emb|CAC45865.1| Probable prolyl-tRNA synthetase [Sinorhizobium meliloti 1021]
 gi|306896606|gb|EFN27354.1| prolyl-tRNA synthetase [Sinorhizobium meliloti AK83]
 gi|306904066|gb|EFN34652.1| prolyl-tRNA synthetase [Sinorhizobium meliloti BL225C]
          Length = 442

 Score =  209 bits (531), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 78/449 (17%), Positives = 151/449 (33%), Gaps = 54/449 (12%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
           +       +E+E   HR + R   +    +  +G+  W   G ++   + + +R +    
Sbjct: 8   MPILKENPKEAEIVSHRLMLRTGMVR---QQSAGIYTWLPLGKRVLDKVNAIIREEQNRS 64

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
              E+  P +    LWQ+SG +D+Y   M  +K   D     R     P N      +F 
Sbjct: 65  GAIELLMPTLQSAELWQESGRYDAYGKEMLRIKDRQD-----RPMLYGPTNEEMITDIFR 119

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQ-MFNECLKIH 408
             +KSYR LP+ L      +R+E      G MR R F   DA+ F        +   K+ 
Sbjct: 120 SYVKSYRNLPLNLYHIQLKFRDEIRPRF-GTMRSREFLMKDAYSFDLDRAGAEHAYNKMF 178

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
              +  +   G   I ++  T P     S         I+    ++     +D +   + 
Sbjct: 179 AAYLRTFDRMGLRAIPMRADTGPIGGNLSHEF-----IILADTGESEVFCHKDFLGFDIP 233

Query: 469 LGEGAF----------------YGPKFEYILKDAIG----------RDWQCGTIQV-DFN 501
             +  F                Y    E   + A G          R  + G I      
Sbjct: 234 GEDTNFDDVAGLKTIFDKWTSRYAATSEMHDEAAFGAIAEGERLSARGIEVGHIFYFGTK 293

Query: 502 LPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGNLPLWL---SPIQAI 556
                 A  +    ++     +H   +G    R +  +IE +   N  +W    +P   +
Sbjct: 294 YSEAMGAKVLGPDGKEHT---VHMGSYGIGPTRLVPAIIEASHDDNGIIWPKGIAPFDVV 350

Query: 557 VTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
           V  +     +      ++ + L      +  D  +E    K     +  +P+ +I G + 
Sbjct: 351 VINMKTGDEACDAACGKVYSDLGKAGFDVLLDDTDERAGGKFATADLIGVPVQVIVGPRS 410

Query: 614 ASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +   + ++   +   + +++  AI  L 
Sbjct: 411 IANGEVEVKDRKTGARETMTVEAAINKLV 439


>gi|18977665|ref|NP_579022.1| prolyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
 gi|74580758|sp|Q8U1C4|SYP_PYRFU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|18893393|gb|AAL81417.1| prolyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
          Length = 479

 Score =  209 bits (531), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 81/424 (19%), Positives = 165/424 (38%), Gaps = 58/424 (13%)

Query: 234 YLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYE 292
                 E+      ++  E  +        G+  W   G KI + +  ++  +++  D++
Sbjct: 3   ERKKWSENFSEWFNEVIEEAGILDKRYPVKGMNVWLPYGLKIMKNIEKFIHEEMERTDHQ 62

Query: 293 EINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           E+  P ++ +  + +++ H   +   +F V  A     D+R   L+P +     ++F   
Sbjct: 63  EVLFPALIPETEFQKEAEHIAGFEGEVFWVTHAGHEPLDVR-LVLRPTSETAMYSMFALW 121

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT-QDDAHVFCTK-EQMFNECLKIHN 409
           ++S+ +LP ++ +  +VYR E       L+RVR  +   +AH      E    +  +   
Sbjct: 122 IRSHADLPFKVYQIVNVYRYETK-HTRPLIRVREISRFFEAHTAHADFEDAERQIKEDLE 180

Query: 410 LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL 469
           +  ++ K      ++ K              WD                           
Sbjct: 181 IFDNLMKKLAIAYVISKRPE-----------WDKF------------------------- 204

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF-NAFYVNSHSEKCHPVMIHRAVF 528
             GA+Y    E ++ D  GR  Q GT+    N    F  A+ +    E      +H+  F
Sbjct: 205 -PGAYYSLGAEVVMPD--GRTLQIGTMH---NYKQNFAKAYNILYEKEDGTHDYVHQTTF 258

Query: 529 GSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI-----TSSAVEYAQEIANLLKSHH 579
           G  ER +  +I    ++    LP  ++PIQ ++  I           YA+EI   LK   
Sbjct: 259 GMSERLLAAVIAIHGDDRGMVLPPTIAPIQVVIVPIPKKGSEEEVYSYAREIEEELKLAG 318

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
           + +  D R++   +K  +  +K +P+ I  G ++A+E+++ + R        VS  + + 
Sbjct: 319 IRVHLDLRDKRPGWKFYDWELKGVPVRIEVGPRDAAEKTVVLARRDKLEKITVSREELVD 378

Query: 640 ILTK 643
            + +
Sbjct: 379 KVRE 382


>gi|315230490|ref|YP_004070926.1| prolyl-tRNA synthetase [Thermococcus barophilus MP]
 gi|315183518|gb|ADT83703.1| prolyl-tRNA synthetase [Thermococcus barophilus MP]
          Length = 480

 Score =  209 bits (531), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 76/426 (17%), Positives = 164/426 (38%), Gaps = 56/426 (13%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
           +       + +    + +L     +        G+  W   G +I + +  ++  +++  
Sbjct: 1   MKVERNKWQNNFSEWYNELIETAGIQDKRYPVKGMNIWLPYGLRIMRNIEKFIHEEMERT 60

Query: 290 DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
            ++E+  P ++ +  + +++ H   +   +F V  A     D+R   L+P +     ++F
Sbjct: 61  GHQEVLFPALIPETEFQKEAEHIAGFEGEVFWVTHAGHDPLDVR-LILRPTSETAMYSMF 119

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT-QDDAHVFCTKEQMFNECLKI 407
              ++S+ +LP ++ +  +VYR E       L+RVR  +   +AH   T    F +  + 
Sbjct: 120 ALWIRSHADLPFKIYQIVNVYRYETK-HTRPLIRVREISRFFEAH---TAHDSFEDAERQ 175

Query: 408 HNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGV 467
               + I+ +   +  +  + ++  +       WD                         
Sbjct: 176 IKEDLEIFDNLAKKLALPYIVSKRPE-------WDKF----------------------- 205

Query: 468 LLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF-NAFYVNSHSEKCHPVMIHRA 526
               GA+Y    E ++ D  GR  Q GT+    N    F  A+ +    E      +H+ 
Sbjct: 206 ---PGAYYSLGAEVVMPD--GRTLQIGTMH---NYKQNFAKAYNIMYEKEDGTHEYVHQT 257

Query: 527 VFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITS-----SAVEYAQEIANLLKS 577
            +G  ER +  +I    ++    LP  ++PIQ ++  I           YA+EIA  LK+
Sbjct: 258 TYGMSERLLAAVIAVHGDDRGMVLPPTIAPIQVVIVPIPKKDSPYDVFAYAREIAEELKT 317

Query: 578 HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
             + +  D R+     K  +  +K +P+ I  G ++   +   + R  +     V   + 
Sbjct: 318 AGIRVHVDERDIRPGRKFYDWELKGVPLRIEVGPRDVEGQKAVLARRDTLEKFTVERAEL 377

Query: 638 IPILTK 643
           I  + +
Sbjct: 378 IEKVRE 383


>gi|295689605|ref|YP_003593298.1| prolyl-tRNA synthetase [Caulobacter segnis ATCC 21756]
 gi|295431508|gb|ADG10680.1| prolyl-tRNA synthetase [Caulobacter segnis ATCC 21756]
          Length = 443

 Score =  209 bits (531), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 83/439 (18%), Positives = 151/439 (34%), Gaps = 41/439 (9%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
            +++   H+ + R   +    ++ +G+  W   G ++   +   +R ++      E+  P
Sbjct: 16  SDAQIVSHQLMLRAGMIR---QEAAGIYAWLPLGLRVLNKIEQIVREEMDRAGAIELLMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW++SG +D Y   M  +     T +  R     P        +F   +KSY++
Sbjct: 73  TIQLADLWRESGRYDDYGDEMLRI-----TDRHKRELLFGPTAEEVVTDIFRASIKSYKD 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYK 416
           LP  L      +R+E      G+MR R F   DA+ F    +       ++    ++++ 
Sbjct: 128 LPKNLYNIQWKFRDERRPRF-GVMRGREFFMKDAYSFDLDADGARKSYNRMFVAYLNLFA 186

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV-----LDTIKNSSQD--RINTGVLL 469
             G + + ++  T P     S      AE     V     L  +     D   IN  +  
Sbjct: 187 RMGLKAVPMRADTGPIGGDLSHEFIVLAETGESAVFCHKDLVEMPAPGPDLDWINGDLQP 246

Query: 470 ---GEGAFYGPKFEYILKDAIG----------RDWQCGTI-QVDFNLPSRFNAFYVNSHS 515
                 A Y    E   + A            R  + G I            A       
Sbjct: 247 IVNQRTALYAATEEMHDEAAFNALPEGDRLSARGIEVGHIFSFGTKYSEPMKATVQGPDG 306

Query: 516 EKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTI--TSSAVEYAQ 569
           ++  PV +     G   R +G +IE          P  ++P    +  +    +A + A 
Sbjct: 307 QQV-PVQMGSYGVGVS-RLLGAIIEASHDEGGIIWPESVAPFDVGIVNMRQGDAACDAAC 364

Query: 570 EIA-NLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
           E A N LK+    +  D  +     K     +  +P  +I G K  +E  + I+   +  
Sbjct: 365 ETAYNALKAAGRDVLYDDTDARGGAKFATMDLIGLPWQLIVGPKGIAEGVVEIKNRKTGE 424

Query: 629 TQKVSLLDAIPILTKESLP 647
               SL   +  LTK    
Sbjct: 425 RHTASLDSVLDGLTKSKTA 443


>gi|294084092|ref|YP_003550850.1| prolyl-tRNA synthetase [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292663665|gb|ADE38766.1| prolyl-tRNA synthetase [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 437

 Score =  208 bits (530), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 79/440 (17%), Positives = 150/440 (34%), Gaps = 34/440 (7%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  L       +E++   HR + R      + +  +G+  W   G ++   + + +R +
Sbjct: 4   SQYFLPLLKETPKEAQIASHRLMLRAGM---VQQSSAGIYSWLPLGKRVLDKIENIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
                  EI  P +    LWQ+SG +D Y A M  +       +  R     P N     
Sbjct: 61  QNRAGALEILMPTIQPAELWQESGRYDDYGAEMLRIVD-----RHERNMLYGPTNEEQIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +F   ++SY+ LP+ +      +R+E      G+MR R F   DA+ F    ++     
Sbjct: 116 DIFRAHVRSYKALPLNMYHIQWKFRDEVRPRF-GIMRGREFLMKDAYSFDLDGDKARAAY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV---LDTIKNSSQD 461
            ++    +  +   G   I ++  T P     S      AE    GV    D +  +   
Sbjct: 175 NRMFVSYLKTFARMGLTAIPMEADTGPIGGDMSHEFIILAETGESGVYFHKDWMNINLDA 234

Query: 462 RINTGVLLGEG-----AFYGPKFEYILKD----AIGRDWQCGTI---QVDFNLPSRFNAF 509
            I+    L        + Y    +    D              I    + +       A 
Sbjct: 235 DIDYNADLQPFVDKYTSLYARADDMHDADNCPVTADELMSLRGIEIGHIFYFGTKYSEAM 294

Query: 510 YVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGNLPLWL---SPIQAIVTTITSSA 564
                      V +H   +G  + R +G +IE +      +W    +P    +  +    
Sbjct: 295 GATVSGPDGKAVPVHMGSYGIGVSRLVGGIIEASHDDKGIIWPDSVAPFGVAIVNLKPGD 354

Query: 565 VEY---AQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
                 A+ +     +  L    D RN+    K+    +  IP  I+ G +      + +
Sbjct: 355 AVCDAEAERLYEQFDNAGLEPLLDDRNDRPGAKMASMDLIGIPWQIVVGPRGMENNMVEV 414

Query: 622 RRFGSTTTQKVSLLDAIPIL 641
           +R  +  T ++S   A+  +
Sbjct: 415 KRRKTGETAEMSPDSAVIKI 434


>gi|167646774|ref|YP_001684437.1| prolyl-tRNA synthetase [Caulobacter sp. K31]
 gi|189083491|sp|B0SZ28|SYP_CAUSK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|167349204|gb|ABZ71939.1| prolyl-tRNA synthetase [Caulobacter sp. K31]
          Length = 445

 Score =  208 bits (530), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 77/436 (17%), Positives = 149/436 (34%), Gaps = 40/436 (9%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
            +++   H+ + R   +    ++ +G+  W   G ++ + +   +R ++      E+  P
Sbjct: 16  SDAQIVSHQLMLRAGMIR---QEAAGIYAWLPLGLRVLKKVERIVREEMDRAGAIELLMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW++SG +D Y   M  +     T +  R     P        +F   +KSY++
Sbjct: 73  TIQLADLWRESGRYDDYGDEMLRI-----TDRHKRDLLYGPTAEEVVTDIFRASVKSYKD 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYK 416
           LP  L      +R+E      G+MR R F   DA+ F    E       ++    ++++ 
Sbjct: 128 LPKNLYNIQWKFRDERRPRF-GVMRGREFLMKDAYSFDLDAEGARKAYNRMFVAYLNLFS 186

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV-----LDTIKNSSQDRINTG----V 467
             G + + ++  T P     S      AE     V     L  +     D    G    +
Sbjct: 187 RMGLKAVPMRADTGPIGGDLSHEFIVLAETGESAVFCHKDLVEMAAPGPDIDWYGDLQPL 246

Query: 468 LLGEGAFYGPKFEYILKDA----------IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSE 516
           +    A Y    E   + A            R  + G I            A        
Sbjct: 247 VNERTALYAATEEMHDEAAFAALPEGDRLSARGIEVGHIFSFGTKYSEPMKALVTGPDG- 305

Query: 517 KCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTI---TSSAVEYAQ 569
           K  PV +     G   R +G +IE          P  ++P    V  +    ++  E  +
Sbjct: 306 KDVPVQMGSYGVGVS-RLLGAIIEASHDEGGIIWPESVAPFDVGVINMRQGDAACDEACE 364

Query: 570 EIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
                L++    +  D  +     K     +  +P  +I G K  +E  + ++   +   
Sbjct: 365 TAYKALQAAGRDVLYDDNDTRGGAKFATMDLIGVPWQLIVGPKGIAEGVVELKNRKTGER 424

Query: 630 QKVSLLDAIPILTKES 645
               L + I  L+ ++
Sbjct: 425 HSAPLAEVIAQLSAQN 440


>gi|39935993|ref|NP_948269.1| prolyl-tRNA synthetase [Rhodopseudomonas palustris CGA009]
 gi|81829575|sp|Q6N5P6|SYP_RHOPA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|39649847|emb|CAE28369.1| proline-tRNA ligase [Rhodopseudomonas palustris CGA009]
          Length = 438

 Score =  208 bits (530), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 81/435 (18%), Positives = 158/435 (36%), Gaps = 37/435 (8%)

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEI 294
              +E+E   HR + R   L    ++ +G+  W   G ++ + +   +R +       E+
Sbjct: 13  ENPKEAEIVSHRLMLRAGMLR---QEAAGIYAWLPLGHRVLKKIEQIVREEQNRAGAIEL 69

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
             P +    LW++SG +D+Y   M  +       +  R     P N      +F   +KS
Sbjct: 70  LMPTLQLADLWRESGRYDAYGPEMLRI-----ADRHKRELLYGPTNEEMITEIFRAYIKS 124

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIIS 413
           Y+ LP+ L      +R+E      G+MR R F   DA+ F   E    +   K+    + 
Sbjct: 125 YKSLPLNLYHIQWKFRDEQRPRF-GVMRGREFLMKDAYSFDVDEAGARKSYNKMFVAYLR 183

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN------IMKGVLDT---IKNSSQDRIN 464
            +   G + I ++  T P     S      AE       I + VL+     +N   D   
Sbjct: 184 TFARMGLKAIPMRAETGPIGGDLSHEFIVLAETGESGVYIDRDVLNLPVPDENVDYDGDL 243

Query: 465 TGVLLGEGAFYGPKFEYILKDAIGRDWQ---------CGTIQVDFNLPSRFNAFYVNSHS 515
           T ++    + Y    +         +               Q+ +      ++   N   
Sbjct: 244 TPIIKQWTSVYAATEDVHEPARYESEVPEANRLNTRGIEVGQIFYFGTKYSDSMKANVTG 303

Query: 516 EKCHPVMIHRAVFGS-IERFIGIMIENFKGN----LPLWLSPIQAIVTTI--TSSAVEYA 568
                  IH   +G  + R +G +IE    +     P  ++P +  +  +    +A + A
Sbjct: 304 PDGTDAPIHGGSYGVGVSRLLGAIIEACHDDNGIIWPEAVAPFRVTILNLKQGDAATDAA 363

Query: 569 -QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGST 627
             ++   L +  + +  D  ++    K     +  IP  I  G +  +E  + ++R    
Sbjct: 364 CDQLYRELSAKGVDVLYDDTDQRAGAKFATADLIGIPWQIHVGPRGLAEGKVELKRRSDG 423

Query: 628 TTQKVSLLDAIPILT 642
             + ++L D +  LT
Sbjct: 424 ARENLALADVVARLT 438


>gi|163759522|ref|ZP_02166607.1| prolyl-tRNA synthetase [Hoeflea phototrophica DFL-43]
 gi|162283119|gb|EDQ33405.1| prolyl-tRNA synthetase [Hoeflea phototrophica DFL-43]
          Length = 447

 Score =  208 bits (529), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 82/453 (18%), Positives = 160/453 (35%), Gaps = 47/453 (10%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  L       +++E   HR +AR      I +  +G+  W   G ++   + + +R +
Sbjct: 4   SKYFLPILKENPKDAEIVSHRLMARAGM---IKQQSAGIYSWLPLGKRVLDKVCNIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
                  EI  P +    LW++SG +D Y   M  +   +D     R     P N     
Sbjct: 61  QNRAGAIEILMPTIQPADLWRESGRYDDYGQEMLRINDRND-----REMLFGPTNEEMVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +F   +KSY++LP+ L      +R+E      G+MR R F   DA+ F    E      
Sbjct: 116 DIFRSYVKSYKDLPLNLYHIQWKFRDERRPRF-GVMRGREFLMKDAYSFDLDYEASKAAY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            ++    +  ++  G + I ++  T P     S      AE     V             
Sbjct: 175 NRMFVSYLRTFERCGLKSIPMRADTGPIGGSLSHEFIVLAETGESQVFCHRDFDGFAVPP 234

Query: 465 TGVLLGEGAF-----------YGPKFEYILKDAIGRD---------------WQCGTI-Q 497
             +   + A            +    E + K+   R+                + G I  
Sbjct: 235 VDMNYDDAAAVAAVVEQWTTPFAATDEIMDKEEWAREAWDGLGEDARVSARGIEVGHIFH 294

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNLPLWL---SPI 553
                    NAF      ++ +  M    +     R +G +IE +   N  +W    +P 
Sbjct: 295 FGTKYSEPMNAFVQGPDGKQHYVSMGSYGI--GPSRLLGAIIEASHDENGIIWPKGVAPF 352

Query: 554 QAIVTTITSSAVEY---AQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
              +  +           + I   L++  + +  D  +E    K  +  +  +PI +I G
Sbjct: 353 DVGLINMKPGDAACDAACERIETALENAGIELLYDDTDERAGAKFAKADLIGLPIQVIAG 412

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +  ++ ++ I+   +   + +S+ +AI  L +
Sbjct: 413 PRAVADGNVEIKVRATGERETLSIDEAINRLAQ 445


>gi|91205619|ref|YP_537974.1| prolyl-tRNA synthetase [Rickettsia bellii RML369-C]
 gi|157827332|ref|YP_001496396.1| prolyl-tRNA synthetase [Rickettsia bellii OSU 85-389]
 gi|114152245|sp|Q1RIC9|SYP_RICBR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|166980150|sp|A8GU77|SYP_RICB8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|91069163|gb|ABE04885.1| Prolyl-tRNA synthetase [Rickettsia bellii RML369-C]
 gi|157802636|gb|ABV79359.1| prolyl-tRNA synthetase [Rickettsia bellii OSU 85-389]
          Length = 432

 Score =  208 bits (529), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 80/426 (18%), Positives = 155/426 (36%), Gaps = 27/426 (6%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  L        E++   H+ + R   +    +  +G+  W   G K+ + + + +R  
Sbjct: 4   SKYFLPVLKEDPSEAQITSHKLMLRSGMIR---QQAAGIYSWLPLGLKVLKNIENIVRSN 60

Query: 287 IK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P +   HLW +SG +D+Y   M   +   D           P N     
Sbjct: 61  MDKAGCLEVLMPCIQPAHLWVESGRFDNYGKEMLKFQDRHDNT-----LLFGPTNEDMVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +F + +KSY++LP  L      +R+E      G+MR R F   DA+ F   E+   +  
Sbjct: 116 DIFRNNIKSYKDLPKNLYHIQWKFRDEIRPRF-GVMRGREFLMKDAYSFDIDEESAVKTY 174

Query: 406 -KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV--------LDTIK 456
            +++   I+ ++D G   + V     P     S      AE     +        L    
Sbjct: 175 NQMYKAYINTFRDLGVFAVPVIADNGPIGGKLSHEFHIIAETGESNIYYDKRFKTLKDNP 234

Query: 457 NSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE 516
           +   + I +     E      K     +    +  + G I       S      +N    
Sbjct: 235 DIDIEEIKSWYAAAEEKHDASKLSSDKEITSSKGIEVGHIFYIGTKYSVNMNALINDEHG 294

Query: 517 KCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTIT---SSAVEYAQ 569
           K  P+ +     G I R +  +IE          P+ ++P +  +  +    S  +E A+
Sbjct: 295 KLTPIEMSSYGIG-ISRLVAAIIEANSDAKGIIWPIAVAPFKISLINLNIHDSKCLELAE 353

Query: 570 EIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
            + N L + ++ +  D  +     K   H +   P  II G K+A+   + ++   +   
Sbjct: 354 RVYNELLAQNIEVLYDDTDVRAGSKFATHDLIGSPYQIIIGPKKAANNIVELKNRKNGEI 413

Query: 630 QKVSLL 635
           + + L 
Sbjct: 414 EDIDLN 419


>gi|83858393|ref|ZP_00951915.1| prolyl-tRNA synthetase [Oceanicaulis alexandrii HTCC2633]
 gi|83853216|gb|EAP91068.1| prolyl-tRNA synthetase [Oceanicaulis alexandrii HTCC2633]
          Length = 442

 Score =  208 bits (529), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 76/432 (17%), Positives = 149/432 (34%), Gaps = 36/432 (8%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
            +++   H+ + R   +    ++ +G+  W   G ++ + +   +R +       E+  P
Sbjct: 16  SDAQIVSHQLMLRAGMIR---QEAAGIYAWLPLGLRVLRKIEKIVREEQDRAGAIELLMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW++SG +D Y   M  +       +  R     P N      +F    +SY++
Sbjct: 73  TLQPADLWRESGRYDDYGKEMLRIVD-----RHERDLLYGPTNEEMITEIFRGYCRSYKD 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYK 416
           LP  L      +R+E      G+MR R F   DA+ F    E       K+    ++ + 
Sbjct: 128 LPKILYHIQWKFRDEIRPRF-GVMRGREFLMKDAYSFDLDYEGAVKAYNKMFVAYLNTFA 186

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV-----LDTIKNSSQDRINTGVLL-- 469
             G + + ++  T P     S      AE     V     L  +    +   +  +    
Sbjct: 187 RMGLKSVPMRADTGPIGGKLSHEFIILAETGESEVFCDSRLVDMPAPGEVDFDGDLQPYV 246

Query: 470 -GEGAFYGPKFEYI----LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS-----HSEKCH 519
               A Y    E       +  +  + +     ++      F   Y +            
Sbjct: 247 DQRTALYAATEEMHDAARFEAEVPEERRLSARGIEVGHIFNFGTKYSDPMKAQVAGPDGK 306

Query: 520 PVMIHRAVFGS-IERFIGIMIENFKGN----LPLWLSPIQAIVTTITSSAVEYAQ---EI 571
              +H   +G  + R +G +IE          P  ++P  A V  + +   + A+   EI
Sbjct: 307 ETAVHMGSYGVGVSRLLGAIIEASHDENGVIWPEAVAPFGAGVINMRAGDADCAKAADEI 366

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
              L +  L    D    +   K     +  +P  +I G +   E    ++   S    +
Sbjct: 367 YTKLDAAGLEPLLDDTAASAGAKFATMDLIGVPYQVIVGPRGLKEGKAEVKIRASGERHE 426

Query: 632 VSLLDAIPILTK 643
           +SL DA+  L +
Sbjct: 427 LSLEDAVNRLVE 438


>gi|239831704|ref|ZP_04680033.1| prolyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301]
 gi|239823971|gb|EEQ95539.1| prolyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301]
          Length = 446

 Score =  208 bits (528), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 77/447 (17%), Positives = 151/447 (33%), Gaps = 54/447 (12%)

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEI 294
              +E+E   HR + R   +    +  +G+  W   G K+   +   +R +       EI
Sbjct: 17  ENPKEAEIVSHRLMLRSGMIR---QQSAGIYAWLPIGLKVLNKVCDIIREEQNRAGANEI 73

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
             P +    LW++SG +D+Y   M  ++      +  R     P N      +F   ++S
Sbjct: 74  LMPTIQSADLWRESGRYDAYGKEMLRIQD-----RQERDMLFGPTNEEMVTDIFRSYVRS 128

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIIS 413
           Y++LP+ L      +R+E      G+MR R F   DA+ F    E       ++    + 
Sbjct: 129 YKDLPLNLYHIQWKFRDEVRPRF-GVMRSREFLMKDAYSFDLDYEGAKMAYYRMFVSYLR 187

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
            +   G + I ++  T P     S      AE       ++     +  ++  V   +  
Sbjct: 188 TFARVGLQAIPMRADTGPIGGDLSHEFIILAETG-----ESQVFCDKAYLDLAVPGADTD 242

Query: 474 F----------------YGPKFEYILKD----------AIGRDWQCGTI-QVDFNLPSRF 506
           F                Y    E   +              R  + G I           
Sbjct: 243 FRNDAQLTDIVQRWTTPYAATDEMHDEADWAKVKPEDQVSARGIEVGHIFHFGTKYSEPM 302

Query: 507 NAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN----LPLWLSPIQAIVT--- 558
            A       ++    ++    +G    R +   IE F  +     P  ++P  A +    
Sbjct: 303 GAKVQGPDGKEH---LVSMGSYGIGPSRLVAAAIEAFHDDAGIIWPKAIAPFGAGIVNMK 359

Query: 559 TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERS 618
                    ++++   L +  +    D  ++    K     +  +P  +I G +  +   
Sbjct: 360 PGDEGCDAVSEKLYEALTNAGVDPLLDDTDDRPGAKFATMDLIGLPTQVIVGPRGVAAGE 419

Query: 619 IGIRRFGSTTTQKVSLLDAIPILTKES 645
           + I+   +   Q +S+  AI +LT E+
Sbjct: 420 VEIKDRKTGERQNLSVEAAINLLTAEA 446


>gi|254171909|ref|ZP_04878585.1| prolyl-tRNA synthetase [Thermococcus sp. AM4]
 gi|214033805|gb|EEB74631.1| prolyl-tRNA synthetase [Thermococcus sp. AM4]
          Length = 483

 Score =  208 bits (528), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 80/427 (18%), Positives = 154/427 (36%), Gaps = 56/427 (13%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
                           + +L     +        G+  W   G KI + + +++R +++ 
Sbjct: 1   MTKVKREKWSNEFSEWYNELLETAGIIDKRYPVKGMNVWLPYGLKIMRNIEAFIRAEMER 60

Query: 290 -DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
             +EE+  P ++ +  + +++ H   +   ++ V  A     D+R   L+P +     ++
Sbjct: 61  TGHEEVLFPALIPETEFQKEAEHIKGFEDEVYWVTHAGLDPLDVR-LILRPTSETAMYSM 119

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT-QDDAHVFCTKEQMFNECLK 406
           F+  ++S+ +LP ++ +  +VYR E       L+RVR  +   +AH      +     +K
Sbjct: 120 FSLWIRSHADLPFKVYQIVNVYRYETK-HTRPLIRVREISRFFEAHTAHADFEDAERQIK 178

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
               I      F     ++               WD                        
Sbjct: 179 EDLEIFDRLAKFLALPYIISKRP----------DWDKF---------------------- 206

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF-NAFYVNSHSEKCHPVMIHR 525
                GAFY    E ++ D  GR  Q GT+    N    F  A+ +   +E       H+
Sbjct: 207 ----PGAFYSLGAEIMMPD--GRTLQIGTMH---NYKQNFAKAYNIQYETETGDHEYAHQ 257

Query: 526 AVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI-----TSSAVEYAQEIANLLK 576
             FG  ER +  +I    ++    LP  ++PIQ ++  I           YA+EIA  L+
Sbjct: 258 TTFGMSERLLAAVIAVHGDDSGMVLPPTIAPIQVVIVPIPKKDANVDVFAYAREIAEELR 317

Query: 577 SHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
                +  D R+     K  +  +K +P+ I  G ++   R   + R  +     V    
Sbjct: 318 KAGFRVHVDERDIRPGRKYYDWELKGVPLRIEVGPRDVEGRKAVLARRDTFEKVTVERDA 377

Query: 637 AIPILTK 643
            +  + K
Sbjct: 378 IVEEVKK 384


>gi|315499825|ref|YP_004088628.1| prolyl-tRNA synthetase [Asticcacaulis excentricus CB 48]
 gi|315417837|gb|ADU14477.1| prolyl-tRNA synthetase [Asticcacaulis excentricus CB 48]
          Length = 439

 Score =  208 bits (528), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 77/446 (17%), Positives = 152/446 (34%), Gaps = 41/446 (9%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  L        E++   HR + R   +    ++ +G+  W   G ++ + +   +  +
Sbjct: 4   SRYLLPLLKENPSEAQIVSHRLMLRTGMIR---QEAAGIYAWLPLGLRVLRKIEKIVHEE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++     E+  P +    LW++SG +D Y   M  +K      +  R     P N     
Sbjct: 61  MQRAGAVELLMPTLQLADLWRESGRYDDYGQEMLRIKD-----RHEREMLYGPTNEEMIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +F   +KSY++LP+ L      +R+E      G+MR R F   DA+ F   E    +  
Sbjct: 116 EIFRGTVKSYKDLPMNLYHIQWKFRDEQRPRF-GVMRGREFLMKDAYSFDIDEASARKAY 174

Query: 406 -KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV--------LDTIK 456
            ++    ++ +   G + + ++  T P     S      AE     V        +    
Sbjct: 175 NRMFIAYLNTFSRLGLKAVPMRADTGPIGGDLSHEFIILAETGESAVFCHKDLVDMPAPG 234

Query: 457 NSSQDRINTGVLLGEGAFYGPKFEYILKDAIG----------RDWQCGTIQV-DFNLPSR 505
                    G++    + Y    E   + A            R  + G I        + 
Sbjct: 235 ADVDWDDLQGLVDQRTSLYAATEEMHDEAAFNAVPADKQLSARGIEVGHIFYFGEKYSAP 294

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN----LPLWLSPIQAIVT-- 558
             A    +   +   V +H   +G  + R IG +IE          P  ++P    +   
Sbjct: 295 MGAKVSGADGSQ---VNVHMGSYGVGVSRLIGGIIEASHDEAGIIWPESVTPFDVALVNL 351

Query: 559 -TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASER 617
                +     ++    LK+    +     ++    K     +  IP  +I G K  +E 
Sbjct: 352 RVGDEACDAACEKAYKALKAAGRDVLYHDTDDRPGAKFASMDLIGIPWQLIIGPKGIAEG 411

Query: 618 SIGIRRFGSTTTQKVSLLDAIPILTK 643
            + I+   +      +    +  LTK
Sbjct: 412 QVEIKHRATGERHTAAFDAVLEQLTK 437


>gi|145591039|ref|YP_001153041.1| prolyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
 gi|166980145|sp|A4WJ22|SYP_PYRAR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|145282807|gb|ABP50389.1| prolyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
          Length = 488

 Score =  208 bits (528), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 81/424 (19%), Positives = 158/424 (37%), Gaps = 62/424 (14%)

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEE 293
              L  +       L RE +L+ +     G   W   G ++ + +   +RR   +  ++E
Sbjct: 12  REKLRANLIEWFHWLLREAELYDVRYPVKGAYVWRPYGMRLRRHVEELIRRSHDETGHQE 71

Query: 294 INTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           +  P  +    + ++S H   +   +F V    +   +     L+P +    + +    +
Sbjct: 72  VLFPVFIPYEFFGKESQHIRGFEKEVFWVSKGGE---EGERLVLRPTSETAIMPMVKLWV 128

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD-DAHVFCTK-EQMFNECLKIHNL 410
             Y++LP+RL +  SV+R E     H ++R+R  +   +AH      E    +  +   +
Sbjct: 129 HDYKDLPLRLYQIVSVFRAETK-MTHPMIRLREISMFKEAHTVHVDREDAERQVREAVEI 187

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
              I+ +     ++ K              WD                            
Sbjct: 188 YKKIFDEMCLAYMINKRPD-----------WDKF-------------------------- 210

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG 529
            GA Y   F+ +L D  GR  Q GT+     N    F   Y+ +   +    + H   +G
Sbjct: 211 AGAEYTIAFDTVLPD--GRTLQIGTVHYLGTNFTRVFEVTYLAADGTRR---LAHTTSYG 265

Query: 530 SIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVE------YAQEIANLLKSHH 579
             ER I  M+    ++    LP  L+PIQ ++  I     E      YA+E+   L+   
Sbjct: 266 ISERSIAAMLITHGDDAGTVLPPRLAPIQVVIVPIFYGEEEAASVISYAREVEKALREAG 325

Query: 580 LSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           + +  D R ++T  +K     +K +P+ +  G ++  +R + I R  +     V L + +
Sbjct: 326 MRVHIDDRPDKTPGWKFYFWELKGVPLRVEVGKRDLEKRQVVITRRDTLEKYAVGLGELV 385

Query: 639 PILT 642
             + 
Sbjct: 386 DAVR 389


>gi|114799658|ref|YP_760468.1| prolyl-tRNA synthetase [Hyphomonas neptunium ATCC 15444]
 gi|123323241|sp|Q0C1C5|SYP_HYPNA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|114739832|gb|ABI77957.1| prolyl-tRNA synthetase [Hyphomonas neptunium ATCC 15444]
          Length = 439

 Score =  208 bits (528), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 79/446 (17%), Positives = 151/446 (33%), Gaps = 42/446 (9%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  L        ++    H+ + R   +    ++G+G+  W   G+++ + +   +R +
Sbjct: 4   SKFFLPVSKEAPADAAIVSHQLMLRTGMIR---QNGAGIYSWLPLGYRVLKRIEQIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P +    LW++SG +D Y   M  +K      +  R     P N     
Sbjct: 61  MNRAGAIEMLMPTLQQADLWRESGRYDDYGKEMLRIKD-----RHERDMLYGPTNEELIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNEC 404
            VF   +KSY++LP+ L      +R+E      G+MR R F   DA+ F  T+E      
Sbjct: 116 DVFRTYVKSYKQLPLNLYHQQWKFRDEVRPRF-GVMRGREFLMKDAYSFDLTEEDARAAY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL------WDDAENIMKGVLDT---- 454
            K+    ++ +   G   I ++  T P     S          + A    K +LD     
Sbjct: 175 RKMFCAYLNAFDRMGLTAIPMRADTGPIGGDLSHEFIILADTGESAVFCDKALLDLPAPG 234

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIG----------RDWQCGTIQV-DFNLP 503
           +    +  +   V    G +Y    E   + A            R  + G I        
Sbjct: 235 LDLDFESDLTPFVTERTG-YYAATEEMHDEAAFNALPEDRRVSARGIEVGHIFFFGTKYS 293

Query: 504 SRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVT- 558
              NA       +   PV +     G   R +G +IE          P  ++P    +  
Sbjct: 294 KPMNAVVQGPDGQMV-PVQMGSYGIGVS-RLLGAIIEACHDENGIVWPESVAPFDVGLIN 351

Query: 559 --TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASE 616
                 +       +   L +    +  D  ++    K     +  +P     G +  +E
Sbjct: 352 MRPGNEACDAACNTLYAALTAAGREVLYDETDDRAGAKFARMDLIGLPWQTTVGPRGVTE 411

Query: 617 RSIGIRRFGSTTTQKVSLLDAIPILT 642
             + ++   +     V + D +  L 
Sbjct: 412 GKVEVKNRKTGEKHDVKIEDMLAQLK 437


>gi|14590847|ref|NP_142919.1| prolyl-tRNA synthetase [Pyrococcus horikoshii OT3]
 gi|74579173|sp|O58734|SYP_PYRHO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|3257420|dbj|BAA30103.1| 480aa long hypothetical prolyl-tRNA synthetase [Pyrococcus
           horikoshii OT3]
          Length = 480

 Score =  208 bits (528), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 75/424 (17%), Positives = 155/424 (36%), Gaps = 58/424 (13%)

Query: 234 YLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYE 292
                 E       ++  E  +        G+  W   G KI + +  ++  +++   ++
Sbjct: 3   ERKRWSEEFSEWFNEVIEEAGILDKRYPVKGMNVWLPYGLKIMRNIEKFIHEEMERTGHQ 62

Query: 293 EINTPQVLDQ-HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           E+  P ++ +    +++ H   +   +F V  A     D+R   L+P +     ++F   
Sbjct: 63  EVLFPALIPETEFKKEAEHIAGFEGEVFWVTHAGHEPLDVR-LVLRPTSETAMYSMFALW 121

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT-QDDAHVFCTK-EQMFNECLKIHN 409
           ++S+ +LP ++ +  +VYR E       L+RVR  +   +AH      E    +  +   
Sbjct: 122 IRSHADLPFKVYQIVNVYRYETK-HTRPLIRVREISRFFEAHTAHADFEDAERQIKEDLE 180

Query: 410 LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL 469
           +  ++ +      I+ K              WD                           
Sbjct: 181 IFDNLMRKLALAYIISKRPE-----------WDKF------------------------- 204

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF-NAFYVNSHSEKCHPVMIHRAVF 528
             GAFY    E ++ D  GR  Q GT+    N    F  A+ +    E      +H+  F
Sbjct: 205 -PGAFYSLGAEVVMPD--GRTLQIGTMH---NYKQNFSKAYNILYEKEDGTHDYVHQTTF 258

Query: 529 GSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI-----TSSAVEYAQEIANLLKSHH 579
           G  ER +  +I    ++    LP  ++PIQ ++  I           YA+ I   L+   
Sbjct: 259 GMSERLLAAVIAIHGDDRGMVLPPTIAPIQVVIVPIPKKGSEEEVYSYAKGIEEELRDAG 318

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
           + +  D R++   +K  +  +K +P+ +  G  +    ++ + R        V   + + 
Sbjct: 319 IRVYLDLRDKRPGWKFYDWELKGVPVRVEVGPIDVQNSTVVLARRDKLEKITVKREELVD 378

Query: 640 ILTK 643
            + +
Sbjct: 379 KVRE 382


>gi|209548882|ref|YP_002280799.1| prolyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|226701324|sp|B5ZYN2|SYP_RHILW RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|209534638|gb|ACI54573.1| prolyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 440

 Score =  207 bits (527), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 79/453 (17%), Positives = 154/453 (33%), Gaps = 54/453 (11%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-R 285
           ++  +       +E+E   HR + R   +   ++   G+  W   G ++   + + +R  
Sbjct: 4   SRYFMPILKENPKEAEIVSHRLMLRAGMIRQQSQ---GIYSWLPLGKRVLDKVNAIIRDE 60

Query: 286 KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           + +    E++ P +    LWQ+SG +D+Y   M  +K   D     R     P N     
Sbjct: 61  QNRAGAIELSMPTLQSAELWQESGRYDAYGKEMLRIKDRQD-----RPMLYGPTNEEMVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNEC 404
            +F   +KSY++LP+ L      +R+E      G MR R F   DA+ F  T+E   +  
Sbjct: 116 DIFRSSVKSYKDLPLNLYHIQLKFRDEIRPRF-GTMRSREFMMKDAYSFDLTREGAEHSY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            K+    +  +   G   I ++  T P     S         I+    ++     +D + 
Sbjct: 175 NKMFAAYLRTFDRLGLRAIPMRADTGPIGGNLSHEF-----IILADTGESEVFCHKDFVG 229

Query: 465 TGVLLGEGAF----------------YGPKFEYILKDAIG----------RDWQCGTIQV 498
             +      F                Y    E   + A            R  + G I  
Sbjct: 230 FDIPDDRTDFDSVDGLKAIFDKWTSLYAATSEMHDEAAFNAVPEGDRLSARGIEVGHIFY 289

Query: 499 -DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGNLPLWLSPIQA 555
                     A       ++     +H   +G    R +  +IE +   N  +W + +  
Sbjct: 290 FGTKYSEAMGAKVQGPDGKEH---FVHMGSYGIGPTRLVPAIIEASHDDNGIIWPASVAP 346

Query: 556 I-VTTITSSAVEYAQE-----IANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIIC 609
             +  I   A + A +     I   L      +  D  ++    K     +  +P  II 
Sbjct: 347 FDIVVINMKAGDQACDDTCELIYAALTKAGKDVLYDDTDDRAGTKFATADLIGVPFQIIA 406

Query: 610 GDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           G +  +   + ++   +   + +++  AI    
Sbjct: 407 GPRAVANGEVEVKDRKTGARETMTIEAAINRFV 439


>gi|170742529|ref|YP_001771184.1| prolyl-tRNA synthetase [Methylobacterium sp. 4-46]
 gi|226701312|sp|B0ULM2|SYP_METS4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|168196803|gb|ACA18750.1| prolyl-tRNA synthetase [Methylobacterium sp. 4-46]
          Length = 444

 Score =  207 bits (527), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 77/441 (17%), Positives = 150/441 (34%), Gaps = 52/441 (11%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTP 297
           +E+E   HR + R   +    ++ +G+  W   G ++   ++  +R  + +    E+  P
Sbjct: 16  KEAEIVSHRLMLRAGMIR---QEAAGIYAWLPLGLRVLNRVVEVIRAEQDRSGAIELLMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW++SG +++Y   M  ++      +  R     P N     A+F   ++SY++
Sbjct: 73  TIQSAELWRESGRYEAYGKEMLRIRD-----RHEREMLFGPTNEEMITAIFRSAVRSYKD 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYK 416
           LP  L      +R+E      G MR R F   DA+ F   E        K+    +  + 
Sbjct: 128 LPKSLYHIQWKFRDEVRPRF-GTMRSREFLMKDAYSFDLDEAGARHAYNKMFVAYLRTFA 186

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF-- 474
             G + I ++  T P     S         I+    ++     +  ++  +  G   F  
Sbjct: 187 RLGLKAIPMRAETGPIGGNLSHEF-----IILAQTGESEVYCDRAYLDFPIPPGSTDFDD 241

Query: 475 --------------YGPKFEYILKD----------AIGRDWQCGTIQV-DFNLPSRFNAF 509
                         Y    E    +             R  + G I            A 
Sbjct: 242 VAALQATVDHWTSRYAATSEMHEPERFAAVPEEARMAARGIEVGHIFYFGTKYSEPMGAR 301

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTITSSAV 565
                 +   PV +     G   R +  +IE          P  ++P    +  + +  +
Sbjct: 302 VTGPDGQ-ERPVHMGSYGIG-PSRLVAAIIEASHDEAGIVWPDAVAPFDVGLLNLKTGDI 359

Query: 566 EY---AQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
                   I   L++  LS+  D R+E    K     +  +P  +I G K  +E  + ++
Sbjct: 360 ATDAACARIQEQLEAAGLSVLYDDRDERPGAKFATADLIGLPWQVIVGPKGLAEGQVELK 419

Query: 623 RFGSTTTQKVSLLDAIPILTK 643
           R  +   + V+       L +
Sbjct: 420 RRATGERETVAPDALAARLRR 440


>gi|170748459|ref|YP_001754719.1| prolyl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831]
 gi|226701311|sp|B1LUL8|SYP_METRJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|170654981|gb|ACB24036.1| prolyl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831]
          Length = 441

 Score =  207 bits (527), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 85/448 (18%), Positives = 155/448 (34%), Gaps = 42/448 (9%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +       +E+E   HR + R   +    ++ +G+  W   G ++ + + + +RR+
Sbjct: 4   SRYFMPTLRETPKEAEIVSHRLMLRAGLVR---QEAAGIYAWLPLGLRVLERVCAVIRRE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
                  EI  P V    LW++SG +D+Y   M  +K   D     R     P       
Sbjct: 61  QDRSGAVEILMPTVQSAELWRESGRYDAYGKEMLRLKDRHD-----REMLYGPTAEEMVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +F   ++SY++LP  L +    +R+E      G MR R F   DA+ F   +       
Sbjct: 116 EIFRASVRSYKDLPKNLYQISWKFRDEVRPRF-GTMRSREFLMKDAYSFDFDQAGARHAY 174

Query: 406 -KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            ++    +  +   G + I ++  T P     S      A+     V         D   
Sbjct: 175 NRMFVAYLRTFAGLGLKAIPMRADTGPIGGDLSHEFIILAKTGESEVFCDKAYLGFDIPP 234

Query: 465 TGVLLGEGA-----------FYGPKFEYILKDA----------IGRDWQCGTIQV-DFNL 502
             V   + A            Y    E     A            R  + G I       
Sbjct: 235 ATVDFDDVAALQGIVDAWTSHYAATEEMHEPAAFAEVPEDSRMAARGIEVGHIFYFGTKY 294

Query: 503 PSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVT 558
                A           PV +     G   R +  +IE          P  ++P    + 
Sbjct: 295 SEPMGAKVAGPDGI-ERPVHMGSYGIG-PSRLVAAIIEASHDEAGIIWPDAVAPFDVALI 352

Query: 559 T--ITSSAVEYA-QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEAS 615
              +  SA E A  +I + L++  LS+  D R+E    K     +  +P  +I G K  +
Sbjct: 353 NLKVGDSATEAACAQIQSDLEAAGLSVLYDDRDERPGAKFATADLIGLPWQVIVGPKGLA 412

Query: 616 ERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           E  + ++R      + ++ +D +  + +
Sbjct: 413 EGKVELKRRAGGERESLATVDLLARIRR 440


>gi|332159170|ref|YP_004424449.1| prolyl-tRNA synthetase [Pyrococcus sp. NA2]
 gi|331034633|gb|AEC52445.1| prolyl-tRNA synthetase [Pyrococcus sp. NA2]
          Length = 480

 Score =  207 bits (526), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 80/427 (18%), Positives = 160/427 (37%), Gaps = 64/427 (14%)

Query: 234 YLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYE 292
                 E       ++  E  +        G+  W   G KI + +  ++  +++   ++
Sbjct: 3   ERKRWMEDFSEWFNQVIEEAGILDKRYPVKGMNVWLPYGLKIMRNIERFIHEEMERTGHQ 62

Query: 293 EINTPQVLDQ-HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           E+  P ++ +    +++ H   +   +F V  A     D+R   L+P +     ++F   
Sbjct: 63  EVLFPALIPETEFKKEAEHIAGFEGEVFWVTHAGHEPLDVR-LILRPTSETAMYSMFALW 121

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRG----FTQDDAHV-FCTKEQMFNECLK 406
           ++S+ +LP+++ +  +VYR E       L+RVR     F    AHV F   E+   E L+
Sbjct: 122 IRSHADLPLKVYQIVNVYRYETK-HTRPLIRVREISRFFEAHTAHVDFEDAERQIREDLE 180

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           I + ++                                   +       K    D+    
Sbjct: 181 IFDNLMKK---------------------------------LAIAYIISKRPEWDKFP-- 205

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF-NAFYVNSHSEKCHPVMIHR 525
                GA+Y    E ++ D  GR  Q GT+    N    F  A+ +    E      +H+
Sbjct: 206 -----GAYYSLGAEVVMPD--GRTLQIGTMH---NYKQNFAKAYNIMYEKEDGTHDYVHQ 255

Query: 526 AVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI-----TSSAVEYAQEIANLLK 576
             FG  ER +  +I    ++    LP  ++PIQ ++  I          +YA+EI   LK
Sbjct: 256 TTFGMSERLLAAVIAIHGDDRGIVLPPTIAPIQVVIVPIPKKGSEEEVYKYAKEIEEELK 315

Query: 577 SHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
              + +  D R++   +K  +  +K +P+ +  G  +    ++ + R        V   +
Sbjct: 316 MAGIRVHLDLRDKRPGWKFYDWELKGVPVRVEVGPIDVQNSTVVLARRDKLEKITVKREE 375

Query: 637 AIPILTK 643
            +  + +
Sbjct: 376 LVDRVRE 382


>gi|283856263|ref|YP_162195.2| prolyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4]
 gi|292495061|sp|P75000|SYP_ZYMMO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|283775258|gb|AAV89084.2| prolyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 443

 Score =  207 bits (526), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 80/442 (18%), Positives = 153/442 (34%), Gaps = 48/442 (10%)

Query: 234 YLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYE 292
                 +++   H+ + R   +   A    G+  W   G ++ + +   +R +  +    
Sbjct: 11  MKETPADAQIISHKLMLRAGMIRQTAA---GIYAWLPLGLRVLRRIEKIIREEQARAGAL 67

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +    LW++SG +D+Y   M  +K      +  R     P N     A+    L
Sbjct: 68  ELLMPTLQTADLWRESGRYDAYGPEMLRIKD-----RHNRELLYGPTNEEMITALIRDNL 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM-FNECLKIHNLI 411
           +SYR+LP         +R+E      G+MR R F   DA+ F   E    +   ++    
Sbjct: 123 QSYRDLPRIFYHIQWKFRDEVRPRF-GVMRGREFLMKDAYSFDIDETAGRHNYNRMFVAY 181

Query: 412 ISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
           ++ +   G   I ++  T P   +G D   +       G  D   +S+ ++    +   E
Sbjct: 182 LNSFSRLGLRAIPMQADTGP---IGGDLSHEFIVLAPNGESDVFYHSNWEQPTRHI---E 235

Query: 472 GAFYGPKF-----------------------EYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
             F  PK                        E    D + +        + F        
Sbjct: 236 ADFDDPKALQSIVNDHISDYAATDEKRDPLREAQAGDKLRQSRGIEVGHIFFFGTKYSKP 295

Query: 509 FYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN----LPLWLSPIQAIVTT---I 560
                      P+ I    +G  I R +G +IE    +     P  ++P    +      
Sbjct: 296 MGFTLPGPDGKPIPIQMGSYGIGISRLLGAIIEASHDDNGIIWPEAVAPYHVGLINLRID 355

Query: 561 TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
             +    A  +   L++  +    D RNE    K     +  +P  ++ G K A +  + 
Sbjct: 356 DENCRAIADSLYQRLEAAGIDTLYDDRNERGGAKFATMDLIGLPWQVVIGPKGAEKGVVE 415

Query: 621 IRRFGSTTTQKVSLLDAIPILT 642
           ++   +   Q +S+ +A  +LT
Sbjct: 416 LKNRANGEKQTISVENAFNLLT 437


>gi|148255883|ref|YP_001240468.1| prolyl-tRNA synthetase [Bradyrhizobium sp. BTAi1]
 gi|166980102|sp|A5EK68|SYP_BRASB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|146408056|gb|ABQ36562.1| Prolyl-tRNA synthetase [Bradyrhizobium sp. BTAi1]
          Length = 444

 Score =  207 bits (526), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 85/437 (19%), Positives = 154/437 (35%), Gaps = 43/437 (9%)

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEI 294
              +E+E   HR + R   L    ++ +G+  W   G+K+ + +   +R +       E+
Sbjct: 13  ENPKEAEIVSHRLMLRAGMLR---QEAAGIYAWLPLGFKVLKKIEQIVREEQNRAGALEL 69

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
             P +    LW++SG +D+Y   M  +     + +  R     P N      +F   +KS
Sbjct: 70  LMPTLQLADLWRESGRYDAYGPEMLRI-----SDRHKRELLYGPTNEEMITDIFRAYVKS 124

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIIS 413
           YR LP+ L      +R+E      G+MR R F   DA+ F   E        K+    + 
Sbjct: 125 YRNLPLNLYHIQWKFRDEQRPRF-GVMRGREFLMKDAYSFDLDEAGARRAYNKMFVAYLR 183

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIM------KGVLDTIKNSSQ------- 460
            +   G + I ++  T P     S      AE         + VLD     +        
Sbjct: 184 TFARMGLKGIPMRAETGPIGGDLSHEFIVLAETGESGVYCDRDVLDLPIPPASVDYDGDL 243

Query: 461 ----DRINTGVLLGEGAFYGPKFEYILKDAIG---RDWQCGTIQV-DFNLPSRFNAFYVN 512
                +  +     E    G +FE  + +      R  + G I            A    
Sbjct: 244 TPIIKQWTSLYAATEDVHDGARFEAEVPEERRLHTRGIEVGQIFYFGTKYSEPMKALVAG 303

Query: 513 SHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG----NLPLWLSPIQAIVTTITSSAVEY 567
               +   V IH   +G  + R  G +IE          P  ++P +A++  +     + 
Sbjct: 304 PDGAE---VTIHGGSYGVGVSRLAGAIIEACHDDAGIKWPEEVAPFRAVILNLKQGGSDT 360

Query: 568 ---AQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRF 624
               +++   L +  + +  D   +    K     +  IP  I+ G K  +E  + ++  
Sbjct: 361 DAACEQLYRDLLAKGVDVLYDDTEQRAGGKFATADLIGIPWQIMVGPKSLAEGKVEVKTR 420

Query: 625 GSTTTQKVSLLDAIPIL 641
                Q +S  D +  L
Sbjct: 421 SDGARQMMSPADVVARL 437


>gi|288932452|ref|YP_003436512.1| prolyl-tRNA synthetase [Ferroglobus placidus DSM 10642]
 gi|288894700|gb|ADC66237.1| prolyl-tRNA synthetase [Ferroglobus placidus DSM 10642]
          Length = 475

 Score =  206 bits (525), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 80/420 (19%), Positives = 167/420 (39%), Gaps = 59/420 (14%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQ 298
           + +      ++ ++ ++  I     G+  W   G+KI + +   +R  +  D+EE+  P 
Sbjct: 5   KSNFSEWFHEIIQQAEIMDIRYPVKGLYVWFPFGFKIRRLVYDKLREIMDRDHEEVYFPT 64

Query: 299 VLDQ-HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           ++ +  L ++S H   +   +F V        D++  AL+P +      +F   ++S+ +
Sbjct: 65  LIPETELGKESEHIKGFEDEVFWVTHGGLEKLDVK-LALRPTSETAMYPMFKLWIRSHAD 123

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFT-QDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           LP+R+ +  +V+R E       L+R+R  T   +AH      +   E +++   +   + 
Sbjct: 124 LPLRVYQIVNVFRYETK-HTRPLIRLREITSFKEAHTAHRNYEEAEENVRLAVSLYKEFY 182

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           DF     ++                             ++    D+         GA Y 
Sbjct: 183 DFLAIPYLI-----------------------------LRRPEWDKFP-------GADYT 206

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
             F+ ++ D  GR  Q GT+  +  N    F+  Y     +  +   +H+  +G  ER I
Sbjct: 207 IAFDTVMPD--GRTMQIGTVHHLADNFAKTFDIKYETPDGDHAY---VHQTCYGISERCI 261

Query: 536 GIMI----ENFKGNLPLWLSPIQAIVTTI-----TSSAVEYAQEIANLLKSHHLSIETDF 586
             +I    ++    LP  +SP+Q ++  I         ++ ++ +   LK +   +  D 
Sbjct: 262 AALISIHGDDLGLVLPFEVSPVQIVIIPILYKGKEEEVMDLSKRVYEKLKGYGFRVVLDD 321

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
            +E    K  +  +K +PI I  G KEA      +        + +S+ +    L+KE +
Sbjct: 322 TDERPGAKYYKWELKGVPIRIEIGPKEAERNEAVVSFRDEKVKKSLSVEE----LSKEKI 377


>gi|316933915|ref|YP_004108897.1| prolyl-tRNA synthetase [Rhodopseudomonas palustris DX-1]
 gi|315601629|gb|ADU44164.1| prolyl-tRNA synthetase [Rhodopseudomonas palustris DX-1]
          Length = 439

 Score =  206 bits (525), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 79/436 (18%), Positives = 162/436 (37%), Gaps = 37/436 (8%)

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEI 294
              +E+E   HR + R   L    ++ +G+  W   G ++ + +   +R +       E+
Sbjct: 13  ENPKEAEIVSHRLMLRAGMLR---QEAAGIYAWLPLGHRVLKKIEQIVREEQNRAGAIEL 69

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
             P +    LW++SG +D+Y   M  +       +  R     P N      +F   +KS
Sbjct: 70  LMPTLQLADLWRESGRYDAYGPEMLRI-----ADRHKRELLYGPTNEEMITEIFRAYIKS 124

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIIS 413
           Y+ LP+ L      +R+E      G+MR R F   DA+ F   E    +   K+    + 
Sbjct: 125 YKSLPLNLYHIQWKFRDEQRPRF-GVMRGREFLMKDAYSFDVDEAGARKSYNKMFVAYLR 183

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN------IMKGVL-----------DTIK 456
            +   G + I ++  T P     S      A+       I + VL           D   
Sbjct: 184 TFARMGLKAIPMRAETGPIGGDLSHEFIVLADTGESGVFIDRDVLNLPVPDENVDYDADL 243

Query: 457 NSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHS 515
                +  +     E      ++E  + +A   + +   + Q+ +      ++   N   
Sbjct: 244 TPIIKQWTSVYAATEDVHEPARYESEVPEANRLNTRGIEVGQIFYFGTKYSDSMKANVAG 303

Query: 516 EKCHPVMIHRAVFGS-IERFIGIMIENFKGN----LPLWLSPIQAIVTTI--TSSAVEYA 568
                  IH   +G  + R +G +IE    +     P  ++P +  +  +    +A + A
Sbjct: 304 PDGTDAPIHGGSYGVGVSRLVGAIIEACHDDNGIIWPEAVAPFRVTILNLKQGDAATDAA 363

Query: 569 -QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGST 627
             ++   L +  + +  D  ++    K     +  IP  +  G +  +E  + ++R    
Sbjct: 364 CDQLYRELSAKGVDVLYDDTDQRAGAKFATADLIGIPWQVHVGPRGLAEGKVELKRRSDG 423

Query: 628 TTQKVSLLDAIPILTK 643
           + + ++L D +  LT+
Sbjct: 424 SRENLALADLVARLTQ 439


>gi|296116519|ref|ZP_06835129.1| prolyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769]
 gi|295976731|gb|EFG83499.1| prolyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769]
          Length = 439

 Score =  206 bits (525), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 77/434 (17%), Positives = 147/434 (33%), Gaps = 39/434 (8%)

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEI 294
               E++   HR + R   +   +    G+  W   G K+ + + + +R +      +E+
Sbjct: 13  ENPAEAQITSHRLMLRAGLIRQTSA---GIYAWLPAGLKVLRNIANIVRAEQDAIGAQEM 69

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
             P +    LW++SG +D+Y   M  ++      +  R     P N      +F   +KS
Sbjct: 70  LMPTLQSSELWKRSGRYDAYGPEMLRIRD-----RHERDLLYGPTNEEMVTDLFGQVVKS 124

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIIS 413
           YRELP  L      +R+E      G+MR R F   DA+ F    +   +   ++    + 
Sbjct: 125 YRELPQVLYHVQWKFRDEVRPRF-GVMRGREFYMKDAYSFDADYDAAVDSYRRMMLAYLR 183

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
            ++  G + I +   T P     S      A     GV        QD ++  V + + A
Sbjct: 184 TFQRLGVKAIPMVADTGPIGGELSHEFLVLAPTGESGVFFDGAFEEQDWLSEEVDIADRA 243

Query: 474 -----------FYGPKFEYILKDAI----------GRDWQCGTI-QVDFNLPSRFNAFYV 511
                      FY    E   +             GR  + G I           +    
Sbjct: 244 SLAKFFARMTSFYAATDEKHDEAQWAKVPVERRREGRGIEVGHIFHFGRKYTESMDISVS 303

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPL-WL---SPIQAIVTTITSSAVEY 567
                   P M    +   + R +  +IE       + W    +P  A++  + +   + 
Sbjct: 304 GPDGAPLFPEMGSYGI--GVSRLVAAIIEASHDEQGIIWPETVAPFGAVIINLKNGDAQC 361

Query: 568 AQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGST 627
            +    L  +    +  D R E    K  +  +   P  +I G + A    + ++   S 
Sbjct: 362 DEICERLYAAAPDRLLYDDRPERAGVKFADADLMGHPWQVIVGPRGAKAGVVELKNRASG 421

Query: 628 TTQKVSLLDAIPIL 641
              ++ +   +  +
Sbjct: 422 ERSELPIDAVLTRI 435


>gi|16126174|ref|NP_420738.1| prolyl-tRNA synthetase [Caulobacter crescentus CB15]
 gi|221234945|ref|YP_002517381.1| prolyl-tRNA synthetase [Caulobacter crescentus NA1000]
 gi|81856261|sp|Q9A6Z5|SYP_CAUCR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|254782893|sp|B8GWT1|SYP_CAUCN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|13423386|gb|AAK23906.1| prolyl-tRNA synthetase [Caulobacter crescentus CB15]
 gi|220964117|gb|ACL95473.1| prolyl-tRNA synthetase [Caulobacter crescentus NA1000]
          Length = 443

 Score =  206 bits (525), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 83/438 (18%), Positives = 151/438 (34%), Gaps = 41/438 (9%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
            +++   H+ + R   +    ++ +G+  W   G ++   +   +R ++      E+  P
Sbjct: 16  SDAQIVSHQLMLRAGMIR---QEAAGIYAWLPLGLRVLNKIEQIVREEMDRAGAIELLMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW++SG +D Y   M  +     T +  R     P        +F   +KSY++
Sbjct: 73  TIQLADLWRESGRYDDYGDEMLRI-----TDRHKRELLFGPTAEEVVTDIFRASIKSYKD 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYK 416
           LP  L      +R+E      G+MR R F   DA+ F    +       ++    ++++ 
Sbjct: 128 LPKNLYNIQWKFRDERRPRF-GVMRGREFLMKDAYSFDLDADGARKSYNRMFVAYLNLFA 186

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV-----LDTIKNSSQD--RINTGVLL 469
             G + + ++  T P     S      AE     V     L  +     D   IN  +  
Sbjct: 187 RMGLKAVPMRADTGPIGGDLSHEFIVLAETGESAVFCHKDLVEMPAPGPDLDWINGDLQP 246

Query: 470 ---GEGAFYGPKFEYILKDAIG----------RDWQCGTI-QVDFNLPSRFNAFYVNSHS 515
                 A Y    E   + A            R  + G I            A       
Sbjct: 247 LVNQRTALYAATEEMHDEAAFNALPEGDRLSARGIEVGHIFSFGTKYSEPMKATVQGPDG 306

Query: 516 EKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTI--TSSAVEYAQ 569
           ++  PV +     G   R +G +IE          P  ++P    +  +    +A + A 
Sbjct: 307 QQV-PVQMGSYGVGVS-RLLGAIIEASHDEGGIIWPESVAPFDVGIVNMRQGDAACDAAC 364

Query: 570 EIA-NLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
           E A N LK+    +  D  +     K     +  +P  +I G K  +E  + I+   +  
Sbjct: 365 ETAYNALKAAGREVLYDDTDARGGAKFATMDLIGLPWQLIVGPKGIAEGVVEIKHRKTGE 424

Query: 629 TQKVSLLDAIPILTKESL 646
               SL   +  LTK   
Sbjct: 425 RHTASLESVLDGLTKSKT 442


>gi|218463078|ref|ZP_03503169.1| prolyl-tRNA synthetase [Rhizobium etli Kim 5]
          Length = 440

 Score =  206 bits (525), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 79/453 (17%), Positives = 156/453 (34%), Gaps = 54/453 (11%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-R 285
           ++  +       +E+E   HR + R   +   ++   G+  W   G ++   + + +R  
Sbjct: 4   SRYFMPILKENPKEAEIVSHRLMLRAGMIRQQSQ---GIYSWLPLGKRVLDKVNAIIRDE 60

Query: 286 KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           + +    E++ P +    LWQ+SG +D+Y   M  +K   D     R     P N     
Sbjct: 61  QNRAGAIELSMPTLQSAELWQESGRYDAYGKEMLRIKDRQD-----RPMLYGPTNEEMVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNEC 404
            +F   +KSY++LP+ L      +R+E      G MR R F   DA+ F  T+E   +  
Sbjct: 116 DIFRSSVKSYKDLPLNLYHIQLKFRDEIRPRF-GTMRSREFMMKDAYSFDLTREGAEHSY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            K+    +  ++  G   I ++  T P     S         I+    ++     +D + 
Sbjct: 175 NKMFAAYLRTFERLGLRAIPMRADTGPIGGNLSHEF-----IILADTGESEVFCHKDFVG 229

Query: 465 TGVLLGEGAF----------------YGPKFEYILKDAIG----------RDWQCGTIQV 498
             +      F                Y    E   + A            R  + G I  
Sbjct: 230 FDIPDERTDFDSVEGLQAIFEKWTSLYAATSEMHDEAAFNAVPESDRLSARGIEVGHIFY 289

Query: 499 -DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGNLPLWLSPIQA 555
                     A       ++     +H   +G    R +  +IE +   N  +W + +  
Sbjct: 290 FGTKYSETMGAKVQGPDGKEH---FVHMGSYGIGPTRLVPAIIEASHDDNGIIWPASVAP 346

Query: 556 I-VTTITSSAVEYAQE-----IANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIIC 609
             +  I   A + A +     I   L      +  D  ++    K     +  +P+ II 
Sbjct: 347 FDIVVINMKAGDQACDDTCELIYAALTKAGKDVLYDDTDDRAGTKFATADLIGVPVQIIA 406

Query: 610 GDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           G +  +   + ++   +   + +++  AI    
Sbjct: 407 GPRAVANGEVEVKDRKTGARETMTIEAAINRFV 439


>gi|86281359|gb|ABC90422.1| prolyl-tRNA synthetase protein [Rhizobium etli CFN 42]
          Length = 410

 Score =  206 bits (524), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 77/418 (18%), Positives = 142/418 (33%), Gaps = 41/418 (9%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
            I +   G+  W   G ++   + + +R +       E++ P +    LWQ+SG +D+Y 
Sbjct: 1   MIRQQSQGIYSWLPLGKRVLDKVNAIIREEQNRAGAIELSMPTLQSAELWQESGRYDAYG 60

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
             M  +K   D     R     P N      +F   +KSY++LP+ L      +R+E   
Sbjct: 61  KEMLRIKDRQD-----RPMLYGPTNEEMVTDIFRSSVKSYKDLPLNLYHIQLKFRDEIRP 115

Query: 376 SLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              G MR R F   DA+ F  T+E   +   K+    +  ++  G   I ++  T P   
Sbjct: 116 RF-GTMRSREFMMKDAYSFDLTREGAEHSYNKMFAAYLRTFERLGLRAIPMRADTGPIGG 174

Query: 435 VGSDALWDDAENIMKGVL--DTIKNSSQDRINTGVLLGEG---------AFYGPKFEYIL 483
             S      A+     V              NT     EG         + Y    E   
Sbjct: 175 NLSHEFIILADTGESEVFCHKDFVGFDIPGENTDFDSVEGLKAIFDKWTSLYAATSEMHD 234

Query: 484 KDAIG----------RDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-I 531
           + A            R  + G I            A       ++     +H   +G   
Sbjct: 235 EAAFNAVPEGDRLSARGIEVGHIFYFGTKYSEPMGAKVQGPDGKEH---FVHMGSYGIGP 291

Query: 532 ERFIGIMIENFKGN----LPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIET 584
            R +  +IE    +     P  ++P   +V  +     +  +  + I   LK     +  
Sbjct: 292 TRLVPAIIEASHDDNGIIWPASVAPFDVVVINMKVGDQACDDTCELIYAALKKAGKDVLY 351

Query: 585 DFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           D  ++    K     +  +P+ II G +  +   + ++   +   + +++  AI    
Sbjct: 352 DDTDDRAGTKFATADLIGVPVQIIAGPRAVANGEVEVKDRKTGARETMTIEAAINRFV 409


>gi|306843758|ref|ZP_07476357.1| prolyl-tRNA synthetase [Brucella sp. BO1]
 gi|306275949|gb|EFM57662.1| prolyl-tRNA synthetase [Brucella sp. BO1]
          Length = 442

 Score =  206 bits (524), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 75/447 (16%), Positives = 151/447 (33%), Gaps = 54/447 (12%)

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEI 294
              +E+E   HR + R   +    +  +G+  W   G K+   + + +R +       EI
Sbjct: 13  ENPKEAEIVSHRLMLRSGMIR---QQSAGIYSWLPIGLKVLNKVCTIIREEQNRAGANEI 69

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
             P +    LW++SG +D+Y   M  ++      +  R     P N      +F   ++S
Sbjct: 70  LMPTIQSADLWRESGRYDAYGKEMLRIQD-----RQEREMLFGPTNEEMVTDIFRSYVRS 124

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIIS 413
           Y++LP+ L      +R+E      G+MR R F   DA+ F    E       ++    + 
Sbjct: 125 YKDLPLNLYHIQWKFRDEVRPRF-GVMRSREFLMKDAYSFDLDYEGAKMAYYRMFVSYLR 183

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
            +   G + I ++  T P     S      AE       ++     +  +N  V   +  
Sbjct: 184 TFARVGLQAIPMRADTGPIGGDLSHEFIILAETG-----ESQVYCDRAYLNLAVPGADTD 238

Query: 474 F----------------YGPKFEYILKD----------AIGRDWQCGTI-QVDFNLPSRF 506
           F                Y    E   +              R  + G I           
Sbjct: 239 FRNDAQLTDIVTRWTTPYAATDEMHDEADWAKVKPESQVSARGIEVGHIFHFGTKYSEPM 298

Query: 507 NAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN----LPLWLSPIQAIVT--- 558
            A       ++    ++    +G    R +   IE    +     P  ++P  A +    
Sbjct: 299 GAKVQGPDGKEH---LVSMGSYGIGPSRLVAAAIEASHDDAGIVWPKAIAPFGAGIVNMK 355

Query: 559 TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERS 618
                    ++++   L +  +    D ++E    K     +  +P  +I G +  +   
Sbjct: 356 PGDEGCDGVSEKLYEALTNAGVDPLLDDKDERPGAKFATMDLIGLPTQVIVGPRGVAAGE 415

Query: 619 IGIRRFGSTTTQKVSLLDAIPILTKES 645
           + ++   +   Q + +  AI +LT ++
Sbjct: 416 VEVKDRKTGERQSLGIEAAINMLTAQA 442


>gi|190891305|ref|YP_001977847.1| prolyl-tRNA synthetase [Rhizobium etli CIAT 652]
 gi|226701323|sp|B3PW17|SYP_RHIE6 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|190696584|gb|ACE90669.1| prolyl-tRNA synthetase protein [Rhizobium etli CIAT 652]
          Length = 440

 Score =  206 bits (524), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 77/454 (16%), Positives = 156/454 (34%), Gaps = 56/454 (12%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +       +E+E   HR + R   +   ++   G+  W   G ++   + + +R +
Sbjct: 4   SRYFMPILKENPKEAEIVSHRLMLRAGMIRQQSQ---GIYSWLPLGKRVLDKVNAIIREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
                  E++ P +    LWQ+SG +D+Y   M  +K      +  R     P N     
Sbjct: 61  QNRAGAIELSMPTLQSAELWQESGRYDAYGKEMLRIKD-----RQERPMLYGPTNEEMVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNEC 404
            +F   +KSY++LP+ L      +R+E      G MR R F   DA+ F  T+E   +  
Sbjct: 116 DIFRSSVKSYKDLPLNLYHIQLKFRDEIRPRF-GTMRSREFMMKDAYSFDLTREGAEHSY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            K+    +  +   G   I ++  T P     S         I+    ++     +D ++
Sbjct: 175 NKMFAAYLRTFDRLGLRAIPMRADTGPIGGNLSHEF-----IILADTGESEVFCHKDFVD 229

Query: 465 TGVLLGEG-----------------AFYGPKFEYILKDAIG----------RDWQCGTIQ 497
             +  GE                  + Y    E   + A            R  + G I 
Sbjct: 230 FDI-PGESTDFDSVEGLQAIFDKWTSLYAATSEMHDEAAFNAVPEGERLSARGIEAGHIF 288

Query: 498 V-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN----LPLWLS 551
                      A       ++     +H   +G    R +  +IE    +     P  ++
Sbjct: 289 YFGTKYSEPMGAKVQGPDGKEH---FVHMGSYGIGPTRLVPAIIEASHDDNGIIWPASVA 345

Query: 552 PIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIII 608
           P   +V  +     +  +  + I   L      +  D  ++    K     +  +P+ II
Sbjct: 346 PFDVVVINMKAGDQACDDTCELIYAALTKAGKDVLYDDTDDRAGTKFATADLIGVPVQII 405

Query: 609 CGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            G +  +   + ++   +   + +++  AI    
Sbjct: 406 AGPRAVANGEVEVKDRKTGARETMTIEAAINRFV 439


>gi|241204106|ref|YP_002975202.1| prolyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240857996|gb|ACS55663.1| prolyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 440

 Score =  206 bits (524), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 79/453 (17%), Positives = 156/453 (34%), Gaps = 54/453 (11%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-R 285
           ++  +       +E+E   HR + R   +   ++   G+  W   G ++   + + +R  
Sbjct: 4   SRYFMPILKENPKEAEIVSHRLMLRAGMIRQQSQ---GIYSWLPLGKRVLDKVNAIIRDE 60

Query: 286 KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           + +    E++ P +    LWQ+SG +D+Y   M  +K   D     R     P N     
Sbjct: 61  QNRAGAIELSMPTLQSAELWQESGRYDAYGKEMLRIKDRQD-----RPMLYGPTNEEMVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNEC 404
            +F   +KSY++LP+ L      +R+E      G MR R F   DA+ F  T+E   +  
Sbjct: 116 DIFRSSVKSYKDLPLNLYHIQLKFRDEIRPRF-GTMRSREFMMKDAYSFDLTREGAEHSY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            K+    +  +   G   I ++  T P     S         I+    ++     +D ++
Sbjct: 175 NKMFAAYLRTFDRLGLRAIPMRADTGPIGGKLSHEF-----IILADTGESEVFCHKDFVD 229

Query: 465 TGVLLGEGAF----------------YGPKFEYILKDAIG----------RDWQCGTIQV 498
             +      F                Y    E   + A            R  + G I  
Sbjct: 230 FDIPGAHTDFDSVEGLQAIFDKWTSLYAATSEMHDEAAFNAVPEGDRLSARGIEVGHIFY 289

Query: 499 -DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGNLPLWLSPIQA 555
                     A       ++     +H   +G    R +  +IE +   N  +W + +  
Sbjct: 290 FGTKYSEPMGAKVQGPDGKEH---FVHMGSYGIGPTRLVPAIIEASHDDNGIIWPASVAP 346

Query: 556 I-VTTITSSAVEYAQE-----IANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIIC 609
             +  I   A + A +     I   L      +  D  ++    K     +  +P+ II 
Sbjct: 347 FDIVVINMKAGDQACDDTCELIYAALTKAGKDVLYDDTDDRAGTKFATADLIGVPVQIIA 406

Query: 610 GDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           G +  +   + ++   +   + +++  AI    
Sbjct: 407 GPRAVANGEVEVKDRKTGARETMTIEAAINRFV 439


>gi|254469374|ref|ZP_05082779.1| prolyl-tRNA synthetase [Pseudovibrio sp. JE062]
 gi|211961209|gb|EEA96404.1| prolyl-tRNA synthetase [Pseudovibrio sp. JE062]
          Length = 441

 Score =  206 bits (524), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 76/431 (17%), Positives = 155/431 (35%), Gaps = 39/431 (9%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           +E+E   HR + R   +    +  +G+  W   G ++   +   +  +       ++  P
Sbjct: 16  KEAEIVSHRLMLRAGMIR---QQSAGIYAWLPLGHRVLNKIQRIVEEEQNRSGAVQLLMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW++SG +D+Y   M  ++      +  R     P N      +F   ++SY++
Sbjct: 73  TIQPADLWRESGRYDAYGKEMLRIED-----RHEREMLFGPTNEEMITDIFRSYVRSYKD 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYK 416
           LP+ L      +R+E      G+MR R F   DA+ F    E+      ++    +  + 
Sbjct: 128 LPLNLYHIQWKFRDEVRPRF-GVMRGREFLMKDAYSFDLDKERSTEAYRRMFVAYLRTFA 186

Query: 417 DFGFEKIMVKLSTRPEKRVGSDAL-----WDDAENIM-KGVLDTI---KNSSQDRINTGV 467
             G   I +K  T P     S          ++E  + K +LD     +++  D   +G+
Sbjct: 187 RMGLTAIPMKADTGPIGGDLSHEFIVLASTGESEVFLDKDILDLPIPGEDTDFDGDLSGI 246

Query: 468 LLGEGAFYGPKFEYILKDAIG----------RDWQCGTI-QVDFNLPSRFNAFYVNSHSE 516
           +      Y    E   + A G          R  + G I            A  + +   
Sbjct: 247 IEQWTTPYAATDEMYDEAAFGAVAEDKKVSARGIEVGHIFHFGTKYSEPMGAKVMTAEG- 305

Query: 517 KCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTI--TSSAVEYAQE 570
           K  PV +     G   R +G +IE    +     P  ++P    +  +   S   E  + 
Sbjct: 306 KEVPVQMGSYGIGVS-RLLGAIIEACHDDDGIIWPKEVAPFHVGLINMKAGSECDEVCES 364

Query: 571 IANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
           +   L+   + +  D R  +   K     +  +P  ++ G +      + ++   +   +
Sbjct: 365 VYAELEKAGIEVLYDDRKTSAGQKFASMDLIGLPYQLVVGPRGLKTGEVEVKDRAAGDRE 424

Query: 631 KVSLLDAIPIL 641
            ++   A+  L
Sbjct: 425 MLTPEAAVNKL 435


>gi|163795649|ref|ZP_02189615.1| Prolyl-tRNA synthetase [alpha proteobacterium BAL199]
 gi|159179248|gb|EDP63781.1| Prolyl-tRNA synthetase [alpha proteobacterium BAL199]
          Length = 437

 Score =  206 bits (524), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 73/429 (17%), Positives = 147/429 (34%), Gaps = 35/429 (8%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
            ++E   HR + R      I +  +G+  W   G ++ + +   +R +     ++E+  P
Sbjct: 16  RDAEIVSHRLMLRAGM---IQQASAGIYSWLPLGLRVLKKIEQVVREEQDAAGWQEVLMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW++SG +D Y   M  +K   D     R     P N      +F   ++SY+ 
Sbjct: 73  TIQSADLWRESGRYDDYGKEMLRIKDRHD-----RDMLFGPTNEEVITDIFRTHVRSYKA 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYK 416
           LP RL      +R+E      G+MR R F   DA+ F    E       +     +  + 
Sbjct: 128 LPGRLYHIQWKFRDEVRPRF-GVMRGREFLMKDAYSFDLDFEAAKRAYNRQFVAYLKTFD 186

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG---- 472
             G + I +   + P     S      A+     V       + + +   V         
Sbjct: 187 RLGLKAIPMAADSGPIGGDLSHEFIILADTGESEVFCHKDWLTSEAVPATVDYDADLQPI 246

Query: 473 -----AFYGPKFEYI-------LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHP 520
                A Y    E          +  + R        + +      +             
Sbjct: 247 VDACLARYAATDEKHDPATCPVAEADLVRTRGIEVGHIFYFGTKYSDPLGAKVAGPDGKD 306

Query: 521 VMIHRAVFGS-IERFIGIMIENFKGNLPL-WLSPIQA-----IVTTITSSAVEYAQE-IA 572
           V +H   +G  + R +G +IE    +  + W  P+       +   +  +A + A E + 
Sbjct: 307 VTVHMGSYGVGVSRLVGGIIEASHDDAGIVWPEPVAPFKVGLVNLKVGDAACDSATEGLY 366

Query: 573 NLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
             L    + +  D R+E    K+    +  +P  ++ G +  +   + ++   +    ++
Sbjct: 367 GKLLKAGIEVLMDDRDERPGAKLAGMDLIGLPWQVVVGPRGLANGIVEMKNRKTGAKDEM 426

Query: 633 SLLDAIPIL 641
           +   A+  L
Sbjct: 427 TPDAALNRL 435


>gi|162139874|ref|YP_745105.2| prolyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1]
 gi|148887022|sp|Q0BSM0|SYP_GRABC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
          Length = 440

 Score =  206 bits (524), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 78/446 (17%), Positives = 156/446 (34%), Gaps = 40/446 (8%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-R 285
           ++  +        E++   HR + R      I ++ +G+  W   G ++   + + +R  
Sbjct: 4   SRALIPTLKETPAEAQIASHRLMLRAG---LIQQEAAGIYAWLPAGLRVLNAIANIVRDE 60

Query: 286 KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E+  P +    LW++SG +D+Y   M  +K      +  R     P N     
Sbjct: 61  QAGIGAQEVLMPTIQSADLWRESGRYDAYGPEMLRLKD-----RHERDLLYGPTNEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            ++ H +KSYRELP    +    +R+E      G+MR R F   D + F           
Sbjct: 116 DIYRHSVKSYRELPQMAYQIQWKFRDEIRPRF-GVMRGREFLMKDGYSFDLDYAGAVRSY 174

Query: 406 KIHNL-IISIYKDFGFEKIMVKLSTRPEKRVGSDAL-----WDDAENIMKGVLDTIKNSS 459
           +   L  +  ++  G + I +   T P     S          ++E       + I  S 
Sbjct: 175 RRIMLSYMRTFQRLGVKAIPMLADTGPIGGDLSHEFIILAPTGESEVFYDAAFEEIDWSG 234

Query: 460 Q-DRINTGVLLGEGA-----FYGPKFEYILKDAI----------GRDWQCGTIQV-DFNL 502
               +++   L          Y    E     A           GR  + G I       
Sbjct: 235 ASFNVDSDADLERFFQTITGHYAATDEKHDTAAYEALPEARRRTGRGIEVGHIFYFGTKY 294

Query: 503 PSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVT 558
               N        +K HP M    +   + R +  +IE          P  ++P +A V 
Sbjct: 295 SKALNMTVAGRDGQKLHPEMGSYGI--GVSRMVAAVIEASHDEAGIIWPDSIAPFRAAVL 352

Query: 559 TITSSAVEYAQEIANLLKSHHLS-IETDFRNETINYKIREHSIKKIPIIIICGDKEASER 617
            + +          ++ +   +     D R+E    K  +  +   P  ++ G + A+  
Sbjct: 353 NLKNGDAACDAMAEDVYRRIGVRHALYDDRDERAGVKFADADLMGHPWQVVIGPRGAAAG 412

Query: 618 SIGIRRFGSTTTQKVSLLDAIPILTK 643
            + ++R  +    ++++ DA+  + +
Sbjct: 413 RVELKRRRTGERVELTVEDALARIRE 438


>gi|330508032|ref|YP_004384460.1| prolyl-tRNA synthetase [Methanosaeta concilii GP-6]
 gi|328928840|gb|AEB68642.1| prolyl-tRNA synthetase [Methanosaeta concilii GP-6]
          Length = 487

 Score =  206 bits (523), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 68/419 (16%), Positives = 159/419 (37%), Gaps = 57/419 (13%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQ 298
           +E   + + +L    ++        G+  W   G+ I + +   +R+ +  D++E   P 
Sbjct: 24  KEDFSQWYHELLMTGEIIDNRYPVKGMCVWFPFGFAIKKNVYGIIRQLLDPDHQETLFPL 83

Query: 299 VLDQ-HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           ++ +    +++ H   +   ++ V C   T  +++  AL+P +      +F   ++S+ +
Sbjct: 84  MIPENEFMKEAQHIKGFEEEVYWVTCGGTTPLEVK-LALRPTSETAIYPMFKLWIRSHAD 142

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFT-QDDAHVFC-TKEQMFNECLKIHNLIISIY 415
           +P+R+ +  + +R E       L+R+R  T   +AH    T E+   +           Y
Sbjct: 143 MPLRIYQIVNTFRYETK-HTRPLIRLREITSFKEAHTVHATWEEAAEQVEVAIKRYSEFY 201

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           +      ++ +  +           WD                             GA Y
Sbjct: 202 RRLAIPFLVSRRPS-----------WDKF--------------------------PGADY 224

Query: 476 GPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
               + I+ D  G+  Q GT   +       +   Y     E+    ++++  +G  ER 
Sbjct: 225 TTAIDVIMPD--GKTLQVGTAHHLGSTFAKTYEITYEAEDGEQK---LVNQTCYGISERC 279

Query: 535 IGIMI----ENFKGNLPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDF 586
           I  +I    ++    LP  ++P+Q ++  I        +E  +++  +L+   + +E D 
Sbjct: 280 IAALISVHGDDKGLALPWEVAPVQVVIVPILLGDKEKVLEVCRDLLRILQQAGIRVELDT 339

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
            +E    K  +  +K +PI +  G ++  +  + + R  +     +        L +E+
Sbjct: 340 SDERPGAKFYKWEMKGVPIRLEVGPRDIEKGVVTVVRRDAEKL-TLPREGLAQALVREA 397


>gi|83592911|ref|YP_426663.1| prolyl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170]
 gi|114152243|sp|Q2RU19|SYP_RHORT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|83575825|gb|ABC22376.1| Prolyl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170]
          Length = 435

 Score =  206 bits (523), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 79/441 (17%), Positives = 152/441 (34%), Gaps = 37/441 (8%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  L        E+E   HR + R   +    +  SG+  W   G ++ + +   +R +
Sbjct: 4   SRFLLPTLKETPSEAEIVSHRLMLRAGMIR---QHASGIYNWLPLGLRVLRKIEQVVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
                 +EI  P +    LW++SG +D Y   M  +       +  R     P +     
Sbjct: 61  QDATGAQEILMPTIQSADLWRESGRYDDYGKEMLRIVD-----RHERDMLYGPTHEEVAT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNEC 404
            VF   +KSYR LP  L +    +R+E      G+MR R F   D + F  T E   +  
Sbjct: 116 DVFRKNVKSYRALPQNLYQIQWKFRDEVRPRF-GVMRGREFLMKDNYSFDLTYEGARHSY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALW---DDAENIMKGVLDTIKNSSQD 461
            K+    +  +   G + I +   T P     S       D  E+ +    D +   + +
Sbjct: 175 NKMFVAYLRTFARLGLKAIPMAADTGPIGGKLSHEFIILADTGESAVFCHRDLLDKPAPE 234

Query: 462 RINTGVLLGE-----GAFYGPKFEYILKD--------AIGRDWQCGTI-QVDFNLPSRFN 507
            ++    L        + Y    E    D           R  + G I        +   
Sbjct: 235 NVDYDSDLQPLVDSWTSLYAATDEMHRPDHGVPEGDLVSARGIEVGHIFHFGTKYSAPMG 294

Query: 508 AFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNLPLWL---SPIQAIVTT--IT 561
           A             M    +   + R +  +IE +   N  +W    +P    V    + 
Sbjct: 295 ATVTAPDGSSQAVFMGSYGI--GVSRLVAGIIEASHDDNGIIWPDGVAPFDIGVINLKVG 352

Query: 562 SSAVE-YAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
            +A +    ++   L++    +  D  ++    K     +  +P  +I G K  ++  + 
Sbjct: 353 DAATDGVCADLYGRLRAAGKDVLFDDTDDRAGAKFATMDLIGLPWQVIAGPKGVAKGMVE 412

Query: 621 IRRFGSTTTQKVSLLDAIPIL 641
           ++   +    ++S+  A+  L
Sbjct: 413 LKERATGERHELSIDSALAKL 433


>gi|146341083|ref|YP_001206131.1| prolyl-tRNA synthetase [Bradyrhizobium sp. ORS278]
 gi|166980103|sp|A4YVI0|SYP_BRASO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|146193889|emb|CAL77906.1| Prolyl-tRNA synthetase (Proline--tRNA ligase) (ProRS)
           [Bradyrhizobium sp. ORS278]
          Length = 444

 Score =  206 bits (523), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 84/437 (19%), Positives = 153/437 (35%), Gaps = 43/437 (9%)

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEI 294
              +E+E   HR + R   L    ++ +G+  W   G+K+ + +   +R +       E+
Sbjct: 13  ENPKEAEIVSHRLMLRAGMLR---QEAAGIYAWLPLGFKVLKKIEQIVREEQNRAGALEL 69

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
             P +    LW++SG +D+Y   M  +     + +  R     P N      +F   +KS
Sbjct: 70  LMPTLQLADLWRESGRYDAYGPEMLRI-----SDRHKRELLYGPTNEEMITEIFRAYVKS 124

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIIS 413
           YR LP+ L      +R+E      G+MR R F   DA+ F   E        K+    + 
Sbjct: 125 YRNLPLNLYHIQWKFRDEQRPRF-GVMRGREFLMKDAYSFDLDEAGARRAYNKMFVAYLR 183

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIM------KGVLD----TIKNSSQDRI 463
            +   G + I ++  T P     S      AE         + VLD    +        +
Sbjct: 184 TFARMGLKGIPMRAETGPIGGDLSHEFIVLAETGESGVYCDRNVLDLPIPSASVDYDGDL 243

Query: 464 NTGVLLG-------EGAFYGPKFEYILKDAIG---RDWQCGTIQV-DFNLPSRFNAFYVN 512
              +          E    G +FE  +        R  + G I            A    
Sbjct: 244 TPIIKEWTSLYAATEDVHDGARFEAEVPAERRVHTRGIEVGQIFYFGTKYSEPMKALVAG 303

Query: 513 SHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG----NLPLWLSPIQAIVTTITSSAVEY 567
               +   V IH   +G  + R  G +IE          P  ++P +A++  +     + 
Sbjct: 304 PDGAE---VTIHGGSYGVGVSRLAGAIIEACHDDAGIKWPEEVAPFRAVILNLKQGGSDT 360

Query: 568 ---AQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRF 624
               +++   L +  + +  D   +    K     +  IP  I+ G K  +E  + ++  
Sbjct: 361 DAACEQLYRDLLAKGVDVLYDDTEQRAGGKFATADLIGIPWQIMVGPKSLAEGKVEVKTR 420

Query: 625 GSTTTQKVSLLDAIPIL 641
                + +S  D +  L
Sbjct: 421 SDGAREMMSPADIVARL 437


>gi|159184694|ref|NP_354297.2| prolyl-tRNA synthetase [Agrobacterium tumefaciens str. C58]
 gi|81848693|sp|Q8UFV9|SYP_AGRT5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|159139984|gb|AAK87082.2| prolyl-tRNA synthetase [Agrobacterium tumefaciens str. C58]
          Length = 440

 Score =  206 bits (523), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 82/435 (18%), Positives = 146/435 (33%), Gaps = 40/435 (9%)

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEI 294
              +E+E   HR + R   +    +  +G+  W   G ++   +   +R +       E+
Sbjct: 13  ENPKEAEIVSHRLMLRAGMIR---QQSAGIYSWLPLGKRVLDKVNKIIREEQNRAGAIEL 69

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
             P +    LWQ+SG +D Y   M  +K   D     R     P N      +F   +KS
Sbjct: 70  LMPTLQTAELWQESGRYDDYGKEMLRIKDRQD-----RQMLYGPTNEEMITDIFRSYVKS 124

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIIS 413
           Y+ LP+ L      +R+E      G MR R F   DA+ F  TKE   +   K+    + 
Sbjct: 125 YKNLPLNLYHIQLKFRDEVRPRF-GTMRSREFLMKDAYSFDLTKEDAIHSYNKMFVAYLR 183

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV------LDTIKNSSQDRINT-- 465
            ++  G   I ++  T P     S      A+     V      LD    +     +   
Sbjct: 184 TFERLGLRAIPMRADTGPIGGNHSHEFIILADTGESEVFCHKSFLDRAIPAESTDFDDVA 243

Query: 466 ---GVLLGEGAFYGPKFEYILKDAIG----------RDWQCGTIQV-DFNLPSRFNAFYV 511
              GV     A Y    E     A            R  + G I            A   
Sbjct: 244 ALQGVFDEWTADYAATSEMHDDAAYDAIPEGERLSARGIEVGHIFYFGTKYSEPMGAKVQ 303

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLS---PIQAIVTTITSSAVEYA 568
                K HPV +     G       I+  +   N  +W +   P   ++  + +      
Sbjct: 304 GKDG-KEHPVHMGSYGIGPTRLVPAIIEASHDENGIIWPASVAPFDVVIINMKAGDAACD 362

Query: 569 ---QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
              +++   L +    +  D  ++    K     +  +P+ II G +  +   + ++   
Sbjct: 363 AACEKLYYQLSNAGKDVLYDDTDDRAGQKFATADLIGVPVQIIVGPRSVANGEVEVKDRK 422

Query: 626 STTTQKVSLLDAIPI 640
           +   + V++  A+  
Sbjct: 423 TGERETVTIEAAMNK 437


>gi|154253644|ref|YP_001414468.1| prolyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1]
 gi|171769681|sp|A7HY28|SYP_PARL1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|154157594|gb|ABS64811.1| prolyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1]
          Length = 439

 Score =  205 bits (522), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 81/437 (18%), Positives = 147/437 (33%), Gaps = 41/437 (9%)

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEI 294
               E++   HR + R   +   A    G+  W   G  + + +   +R  + +    E+
Sbjct: 13  ENPAEAQIASHRLMLRAGMVRQTAA---GIYAWLPLGLAVLRKIEGIVRDEQKRAGAIEL 69

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
             P +    LW+QSG +D+Y   M  +       +  R     P N      +F   ++S
Sbjct: 70  LMPTLQSADLWRQSGRYDAYGPEMLRIVD-----RHERDMLYGPTNEEMITDIFRGAVRS 124

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIIS 413
           YR+LP  L      +R+E      G+MR R F   D + F    E       K+    + 
Sbjct: 125 YRDLPRNLFHIQWKFRDEIRPRF-GVMRGREFLMKDGYSFDLDVEGARRAYRKMFVSYLR 183

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV-----LDTIKNSSQDRINTG-- 466
            +   G + I +   T P     S      AE     V     L  +     D I+    
Sbjct: 184 SFARMGLKAIPMAADTGPIGGDMSHEFIILAETGESAVFCHRDLVDMAVPGDD-IDYETD 242

Query: 467 -----------VLLGEGAFYGPKFEYIL---KDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
                          +      KF+  +   K    R  + G I       S+     V 
Sbjct: 243 LNPVIAARTDLYAATDEKHDAAKFDAEVPKDKQLSARGIEVGHIFFFGTKYSQSMGALVT 302

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTITSSAVEY- 567
               K  PV +     G   R +G +IE    +     P  ++P    +  + S   E  
Sbjct: 303 GPDGKEVPVQMGSYGIGVS-RLVGAIIEASHDDAGIVWPDAVAPFTVGLINLKSGDAETD 361

Query: 568 --AQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
              + I   L +  + +  D  +E    K     +  +P  ++ G +     ++ ++R  
Sbjct: 362 AACESIYEKLTAQGIDVLYDDTDERAGAKFSNMDLIGLPWQLVIGPRGLKSGTVELKRRA 421

Query: 626 STTTQKVSLLDAIPILT 642
           +   +++S   A+  + 
Sbjct: 422 TGEKEELSPEAALAKIA 438


>gi|116251485|ref|YP_767323.1| prolyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae 3841]
 gi|114152239|sp|Q1MIJ6|SYP_RHIL3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|115256133|emb|CAK07214.1| putative prolyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 440

 Score =  205 bits (522), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 80/449 (17%), Positives = 154/449 (34%), Gaps = 54/449 (12%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKD 289
           +       +E+E   HR + R   +   ++   G+  W   G ++   + + +R  + + 
Sbjct: 8   MPILKENPKEAEIVSHRLMLRAGMIRQQSQ---GIYSWLPLGKRVLDKVNAIIRDEQNRA 64

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
              E++ P +    LWQ+SG +D+Y   M  +K   D     R     P N      +F 
Sbjct: 65  GAIELSMPTLQSAELWQESGRYDAYGKEMLRIKDRQD-----RPMLYGPTNEEMVTDIFR 119

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIH 408
             +KSY++LP+ L      +R+E      G MR R F   DA+ F  T+E   +   K+ 
Sbjct: 120 SSVKSYKDLPLNLYHIQLKFRDEIRPRF-GTMRSREFMMKDAYSFDLTREAAEHSYNKMF 178

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
              +  +   G   I ++  T P     S         I+    ++     +D ++  V 
Sbjct: 179 AAYLRTFDRLGLRAIPMRADTGPIGGKLSHEF-----IILADTGESEVFCHKDFVDFDVP 233

Query: 469 LGEGAF----------------YGPKFEYILKDAIG----------RDWQCGTIQV-DFN 501
                F                Y    E   + A            R  + G I      
Sbjct: 234 GEHTDFDSVEGLQAIFDKWTSLYAATSEMHDEAAFNAVPEGDRLSARGIEVGHIFYFGTK 293

Query: 502 LPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGNLPLWLSPIQAI-VT 558
                 A       ++     +H   +G    R +  +IE +   N  +W + +    + 
Sbjct: 294 YSEPMGAKVQGPDGKEH---FVHMGSYGIGPTRLVPAIIEASHDDNGIIWPASVAPFDIV 350

Query: 559 TITSSAVEYAQE-----IANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
            I   A + A +     I   L      +  D  ++    K     +  +P+ II G + 
Sbjct: 351 VINMKAGDQACDDTCELIYAALSKAGKDVLYDDTDDRAGTKFATADLIGVPVQIIAGPRA 410

Query: 614 ASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +   + ++   +   + +++  AI    
Sbjct: 411 VANGEVEVKDRKTGARETMTIEAAINRFV 439


>gi|327194827|gb|EGE61661.1| prolyl-tRNA synthetase protein [Rhizobium etli CNPAF512]
          Length = 440

 Score =  205 bits (522), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 76/454 (16%), Positives = 155/454 (34%), Gaps = 56/454 (12%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +       +E+E   HR + R   +   ++   G+  W   G ++   + + +R +
Sbjct: 4   SRYFMPILKENPKEAEIVSHRLMLRAGMIRQQSQ---GIYSWLPLGKRVLDKVNAIIREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
                  E++ P +    LWQ+SG +D+Y   M  +       +  R     P N     
Sbjct: 61  QNRAGAIELSMPTLQSAELWQESGRYDAYGKEMLRIND-----RQERPMLYGPTNEEMVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNEC 404
            +F   +KSY++LP+ L      +R+E      G MR R F   DA+ F  T+E   +  
Sbjct: 116 DIFRSSVKSYKDLPLNLYHIQLKFRDEIRPRF-GTMRSREFMMKDAYSFDLTREGAEHSY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            K+    +  +   G   I ++  T P     S         I+    ++     +D ++
Sbjct: 175 NKMFAAYLRTFDRLGLRAIPMRADTGPIGGNLSHEF-----IILADTGESEVFCHKDFVD 229

Query: 465 TGVLLGEG-----------------AFYGPKFEYILKDAIG----------RDWQCGTIQ 497
             +  GE                  + Y    E   + A            R  + G I 
Sbjct: 230 FDI-PGESTDFDSVEGLQAIFDKWTSLYAATSEMHDEAAFNAVPEGERLSARGIEVGHIF 288

Query: 498 V-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN----LPLWLS 551
                      A       ++     +H   +G    R +  +IE    +     P  ++
Sbjct: 289 YFGTKYSEPMGAKVQGPDGKEH---FVHMGSYGIGPTRLVPAIIEASHDDNGIIWPASVA 345

Query: 552 PIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIII 608
           P   +V  +     +  +  + I   L      +  D  ++    K     +  +P+ II
Sbjct: 346 PFDVVVINMKAGDQACDDTCELIYAALTKAGKDVLYDDTDDRAGTKFATADLIGVPVQII 405

Query: 609 CGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            G +  +   + ++   +   + +++  AI    
Sbjct: 406 AGPRAVANGEVEVKDRKTGARETMTIEAAINRFV 439


>gi|329850610|ref|ZP_08265455.1| prolyl-tRNA synthetase [Asticcacaulis biprosthecum C19]
 gi|328840925|gb|EGF90496.1| prolyl-tRNA synthetase [Asticcacaulis biprosthecum C19]
          Length = 443

 Score =  205 bits (522), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 80/436 (18%), Positives = 153/436 (35%), Gaps = 44/436 (10%)

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEI 294
               E++   HR + R   +    +  +G+  W   G K+ + +   +  ++ +    ++
Sbjct: 13  ENPAEAQIVSHRLMLRTGMIR---QQAAGIYAWLPLGLKVLRKVERIVEEEMARAGSIQL 69

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
             P +    LW++SG ++ Y   M  +K   D     R     P        VF   +KS
Sbjct: 70  LMPTLQLADLWRESGRYEDYGQEMLRIKDRHD-----RDLLYGPTAEEAVTEVFRASVKS 124

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIIS 413
           Y++LP+ L +    +R+E      G+MR R F   DA+ F   E    +   ++    ++
Sbjct: 125 YKDLPLNLYQISWKFRDEQRPRF-GVMRGREFLMKDAYSFDVDEASARKAYNRMFIAYLN 183

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV-----LDTIKNSSQDRINT--- 465
            +   G + + ++  T P     S      A+     V     L  +     D ++    
Sbjct: 184 TFSRMGLKAVPMRADTGPIGGDLSHEFIILADTGESAVFCHKDLVDMPAPGHD-VDWNDL 242

Query: 466 -GVLLGEGAFYGPKFEYILKDAIG----------RDWQCGTIQVDFNLPSR-FNAFYVNS 513
            G++    A Y    E   + A G          R  + G I       S+   A     
Sbjct: 243 QGLVDQRTALYAATEEMHDEAAFGEVPEDKKLSARGIEVGHIFYFGEKYSKPMKATVNGP 302

Query: 514 HSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN----LPLWLSPIQAIVT---TITSSAV 565
             E    V +H   +G  + R +G +IE          P  ++P    V        +  
Sbjct: 303 DGE----VTVHMGSYGVGVSRLLGAIIEASHDEAGIIWPESVAPFDVAVINLRPGDEACD 358

Query: 566 EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
              ++    L +    +  +  +E    K     +  IP  +I G K  +E  + +++  
Sbjct: 359 AACEKAYAALTAAGRDVLYNDTDERPGAKFASMDLIGIPWQLIIGPKGLAEGKVELKQRA 418

Query: 626 STTTQKVSLLDAIPIL 641
           +   Q     D +  L
Sbjct: 419 TGERQTALFDDVLNQL 434


>gi|240103108|ref|YP_002959417.1| prolyl-tRNA synthetase [Thermococcus gammatolerans EJ3]
 gi|239910662|gb|ACS33553.1| Prolyl-tRNA synthetase (proS) [Thermococcus gammatolerans EJ3]
          Length = 483

 Score =  205 bits (522), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 80/427 (18%), Positives = 155/427 (36%), Gaps = 56/427 (13%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
                           + +L     +        G+  W   G KI + +  ++  ++  
Sbjct: 1   MAKVKREKWSNEFSEWYNELLETAGIIDKRYPVKGMNVWLPYGLKIMRNIEKFIHSEMAR 60

Query: 290 -DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
             +EE+  P ++ +  + +++ H   +   ++ V  A     D+R   L+P +     ++
Sbjct: 61  TGHEEVLFPALIPETEFQKEAEHIKGFEDEVYWVTHAGLDPLDVR-LILRPTSETAMYSM 119

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT-QDDAHVFCTKEQMFNECLK 406
           F+  ++S+ +LP ++ +  +VYR E       L+RVR  +   +AH   T    F +  +
Sbjct: 120 FSLWIRSHADLPFKVYQIVNVYRYETK-HTRPLIRVREISRFFEAH---TAHVDFEDAER 175

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
                + I+        +  + +R          WD                        
Sbjct: 176 QIKEDLEIFDRLAKFLALPYVISRRPD-------WDKF---------------------- 206

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF-NAFYVNSHSEKCHPVMIHR 525
                GAFY    E ++ D  GR  Q GT+    N    F  A+ +   +E      +H+
Sbjct: 207 ----PGAFYSLGAEIMMPD--GRTLQIGTMH---NYKQNFAKAYNIQYETETGDHEYVHQ 257

Query: 526 AVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI-----TSSAVEYAQEIANLLK 576
             FG  ER +  +I    ++    LP  ++PIQ ++  I           YA+EIA  L 
Sbjct: 258 TTFGMSERLLAAVIAVHGDDSGMVLPPTIAPIQVVIVPIPKKDANVDVFAYAREIAEELG 317

Query: 577 SHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
                +  D R+     K  +  +K +P+ I  G ++   R   + R  +     V    
Sbjct: 318 KAGFRVHVDERDIRPGRKYYDWELKGVPLRIEVGPRDVEGRKAVLARRDTFEKVTVERDA 377

Query: 637 AIPILTK 643
            +  + K
Sbjct: 378 IVEEVKK 384


>gi|327311077|ref|YP_004337974.1| prolyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
 gi|326947556|gb|AEA12662.1| prolyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
          Length = 491

 Score =  205 bits (521), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 91/427 (21%), Positives = 167/427 (39%), Gaps = 63/427 (14%)

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLD 301
                 L RE +++ I     G   W   G KI + + + +R       ++E+  P  + 
Sbjct: 24  MEWFHWLLREAEIYDIRYPVKGAFVWRPYGMKIRRNVEAVIRELHDSTGHQEVLFPVFIP 83

Query: 302 QHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
              + ++S H   + + +F V    +         L+P +    + +F   ++ +R+LP+
Sbjct: 84  YEFFSKESQHIRGFESEVFWVSKGGEA---GERLILRPTSETAMMPMFKLWIQDHRDLPL 140

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQD-DAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
            + +  SV+R E     + ++RVR  +   +AH      +     +++   I    K F 
Sbjct: 141 AVYQIVSVFRAETK-MTNPMIRVREISMFKEAHTAHADREDAERQVRLAVDIYK--KIFD 197

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
              I   +S RPE        WD                             GA Y   F
Sbjct: 198 KMCIPYLISQRPE--------WDKF--------------------------AGAVYTIAF 223

Query: 480 EYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           + IL D  GR  Q GT+     N    F   Y+       +   +H   +G  ER I  M
Sbjct: 224 DTILPD--GRTLQIGTVHYLGTNFSKVFEVTYLRPDGSHEY---VHTTSYGISERSIAAM 278

Query: 539 I----ENFKGNLPLWLSPIQAIVTTIT-----SSAVEYAQEIANLLKSHHLSIETDFR-N 588
           +    ++    +P  L+PIQA+V  I       + +E A  +A  L++  + +  D R +
Sbjct: 279 LIIHGDDAGTTIPPALAPIQAVVVPIIYGEERKAVMEAASSVAERLRASGVRVHIDDRED 338

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL---DAIPILTKES 645
           +T  +K     +K +P+ I  G ++  +RS+ + R  +     V L    DA+  L  E 
Sbjct: 339 KTPGWKFYYWELKGVPLRIEIGKRDVEQRSVVLARRDTLEKYSVGLDELEDAVKKLLGE- 397

Query: 646 LPPDCQK 652
           +  + ++
Sbjct: 398 IEENLRR 404


>gi|254713929|ref|ZP_05175740.1| prolyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|254717013|ref|ZP_05178824.1| prolyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|261218820|ref|ZP_05933101.1| prolyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|261321681|ref|ZP_05960878.1| prolyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|260923909|gb|EEX90477.1| prolyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|261294371|gb|EEX97867.1| prolyl-tRNA synthetase [Brucella ceti M644/93/1]
          Length = 442

 Score =  205 bits (521), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 76/445 (17%), Positives = 150/445 (33%), Gaps = 50/445 (11%)

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEI 294
              +E+E   HR + R   +    +  +G+  W   G K+   + + +R +       EI
Sbjct: 13  ENPKEAEIVSHRLMLRSGMIR---QQSAGIYSWLPIGLKVLNKVCAIIREEQNRAGANEI 69

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
             P +    LW++SG +D+Y   M  ++      +  R     P N      +F   ++S
Sbjct: 70  LMPTIQSADLWRESGRYDAYGKEMLRIQD-----RQEREMLFGPTNEEMVTDIFRSYVRS 124

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIIS 413
           Y++LP+ L      +R+E      G+MR R F   DA+ F    E       ++    + 
Sbjct: 125 YKDLPLNLYHIQWKFRDEVRPRF-GVMRSREFLMKDAYSFDLDYEGAKMAYYRMFVSYLR 183

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV---------------------- 451
            +   G + I ++  T P     S      AE     V                      
Sbjct: 184 TFARVGLQAIPMRADTGPIGGDLSHEFIILAETGESQVYCDRAYLDLAVPGADTDFRNDA 243

Query: 452 -LDTIKNSSQDRINTGVLLGEGAFYG-PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNA 508
            L  I             + + A +   K E  +     R  + G I            A
Sbjct: 244 QLTDIVTRWTTPYAATDEMHDEADWAKVKPESQVSA---RGIEVGHIFHFGTKYSEPMGA 300

Query: 509 FYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN----LPLWLSPIQAIVT---TI 560
                  ++    ++    +G    R +   IE    +     P  ++P  A +      
Sbjct: 301 KVQGPDGKEH---LVSMGSYGIGPSRLVAAAIEASHDDAGIIWPKAIAPFGAGIVNMKPG 357

Query: 561 TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
                  ++++   L +  +    D ++E    K     +  +P  +I G +  +   + 
Sbjct: 358 DEGCDGVSEKLYEALTNAGVDPLLDDKDERPGAKFATMDLIGLPTQVIVGPRGVAAGEVE 417

Query: 621 IRRFGSTTTQKVSLLDAIPILTKES 645
           ++   +   Q + +  AI +LT ++
Sbjct: 418 VKDRKTGERQSLGIEAAINMLTAQA 442


>gi|254718929|ref|ZP_05180740.1| prolyl-tRNA synthetase [Brucella sp. 83/13]
 gi|265983916|ref|ZP_06096651.1| prolyl-tRNA synthetase [Brucella sp. 83/13]
 gi|306838840|ref|ZP_07471671.1| prolyl-tRNA synthetase [Brucella sp. NF 2653]
 gi|264662508|gb|EEZ32769.1| prolyl-tRNA synthetase [Brucella sp. 83/13]
 gi|306406124|gb|EFM62372.1| prolyl-tRNA synthetase [Brucella sp. NF 2653]
          Length = 442

 Score =  205 bits (521), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 76/445 (17%), Positives = 150/445 (33%), Gaps = 50/445 (11%)

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEI 294
              +E+E   HR + R   +    +  +G+  W   G K+   + + +R +       EI
Sbjct: 13  ENPKEAEIVSHRLMLRSGMIR---QQSAGIYSWLPIGLKVLNKVCTIIREEQNRAGANEI 69

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
             P +    LW++SG +D+Y   M  ++      +  R     P N      +F   ++S
Sbjct: 70  LMPTIQSADLWRESGRYDAYGKEMLRIQD-----RQEREMLFGPTNEEMVTDIFRSYVRS 124

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIIS 413
           Y++LP+ L      +R+E      G+MR R F   DA+ F    E       ++    + 
Sbjct: 125 YKDLPLNLYHIQWKFRDEVRPRF-GVMRSREFLMKDAYSFDLDYEGAKMAYYRMFVSYLR 183

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV---------------------- 451
            +   G + I ++  T P     S      AE     V                      
Sbjct: 184 TFARVGLQAIPMRADTGPIGGDLSHEFIILAETGESQVYCDRAYLDLAVPGADTDFRNDA 243

Query: 452 -LDTIKNSSQDRINTGVLLGEGAFYG-PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNA 508
            L  I             + + A +   K E  +     R  + G I            A
Sbjct: 244 QLTDIVTRWTTPYAATDEMHDEADWAKVKPESQVSA---RGIEVGHIFHFGTKYSEPMGA 300

Query: 509 FYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN----LPLWLSPIQAIVT---TI 560
                  ++    ++    +G    R +   IE    +     P  ++P  A +      
Sbjct: 301 KVQGPDGKEH---LVSMGSYGIGPSRLVAAAIEASHDDAGIVWPKAIAPFGAGIVNMKPG 357

Query: 561 TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
                  ++++   L +  +    D ++E    K     +  +P  +I G +  +   + 
Sbjct: 358 DEGCDGVSEKLYEALTNAGVDPLLDDKDERPGAKFATMDLIGLPTQVIVGPRGVAAGEVE 417

Query: 621 IRRFGSTTTQKVSLLDAIPILTKES 645
           ++   +   Q + +  AI +LT ++
Sbjct: 418 VKDRKTGERQSLGIEAAINMLTAQA 442


>gi|154248383|ref|YP_001419341.1| prolyl-tRNA synthetase [Xanthobacter autotrophicus Py2]
 gi|226701431|sp|A7INT8|SYP_XANP2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|154162468|gb|ABS69684.1| prolyl-tRNA synthetase [Xanthobacter autotrophicus Py2]
          Length = 440

 Score =  205 bits (521), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 77/436 (17%), Positives = 144/436 (33%), Gaps = 44/436 (10%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           +E+E   HR + R   +    ++ +G+  W   G ++   + + +R +       E+  P
Sbjct: 16  KEAEIVSHRLMLRAGMIR---QESAGIYAWLPFGLRVLNKVCNIIREEQNRSGAIEMLMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW++SG +D Y   M  +K      +  R     P N      +    +KSY+ 
Sbjct: 73  TIQSADLWRESGRYDDYGKEMLRIKD-----RHEREMLFGPTNEEMITEIVRAYVKSYKA 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYK 416
           LP+ L      +R+E      G+ R R F   DA+ F            K+    +  + 
Sbjct: 128 LPLNLYHIQWKFRDEVRPRF-GVYRSREFLMKDAYSFDLDAAGARHSYNKMFVAYLRTFA 186

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA--- 473
             G + I +   T P     S      A      V            +  V   + A   
Sbjct: 187 RMGLKAIPMVADTGPIGGNLSHEFIILASTGESEVFCHGDYLEMAPPSADVNFDDAAGLQ 246

Query: 474 --------FYGPKFEYILKDA----------IGRDWQCGTIQV-DFNLPSRFNAFYVNSH 514
                    Y    E   + A            R  + G I          F A  + + 
Sbjct: 247 SVFDRWTELYAATSEKHDEAAFAAIPEASRMAARGIEVGHIFYFGTKYSEPFGAKVLGAD 306

Query: 515 SEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGNLPLWL---SPIQAIVTTITSSAV---E 566
             +     IH   +G    R +  MIE +   N  +W    +P Q  +  + +       
Sbjct: 307 GAEHT---IHMGSYGIGPSRLVAAMIEASHDDNGIIWPDAVAPFQVGILNLKAGDSTTGA 363

Query: 567 YAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS 626
             +++   L +    +  D   E    K     +  +P  I+ G K  ++  + ++R   
Sbjct: 364 ACEKLYAELTAAGYDVLYDDTEERAGAKFATADLIGLPWQILVGPKGLADGKVELKRRVD 423

Query: 627 TTTQKVSLLDAIPILT 642
            + + ++  D +  L 
Sbjct: 424 GSRELIAPGDILERLK 439


>gi|190570494|ref|YP_001974852.1| prolyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|213019252|ref|ZP_03335059.1| prolyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|190356766|emb|CAQ54125.1| prolyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|212995361|gb|EEB56002.1| prolyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
          Length = 419

 Score =  205 bits (521), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 93/435 (21%), Positives = 165/435 (37%), Gaps = 40/435 (9%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  L         +E   H+ L R   +   A   SG+  W   G  + + + + +R +
Sbjct: 4   SQYYLPTLKETPAGAEIISHQYLLRAGLIKQTA---SGIYSWLPLGLLVLKNIENIIRDE 60

Query: 287 IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA 346
           I     E+  P V    LW++SG +D Y   M  +K   ++          P +      
Sbjct: 61  I--GAIEVLMPCVQPASLWRESGRYDDYGKEMLRIKDRHES-----DMLFGPTHEEVVTD 113

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECL 405
           +  + +KSY++LP+ L +    +R+E     +G+MR R F   DA+ F    E   N   
Sbjct: 114 LIRNTVKSYKDLPLCLYQIQWKFRDEVRPR-YGVMRGREFLMKDAYSFDVDYEGALNSYN 172

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
            ++   I I+K  G   I V+  T P     S      A N  +  L        D    
Sbjct: 173 LMYKTYIKIFKRMGLTPIGVRADTGPIGGNLSHEFHILA-NTGESTL------YYDNKLF 225

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK-------- 517
            +L  E      K  Y + D +     C   Q   N+       ++    +K        
Sbjct: 226 ELLESEDIE-SLKSIYAVADDMHDPESCPITQEQLNVSKGIEIGHIFYFGDKYSKPMKAS 284

Query: 518 -----CHPVMIHRAVFGS-IERFIGIMIENFKGN----LPLWLSPIQAIVTTITSSAVEY 567
                   V +H   +G  + R +G +IE F  +     P  ++P +  +  + +   E 
Sbjct: 285 VTSQDGKNVNMHMGSYGIGVSRLVGAIIEAFHDDKGIIWPEAVAPFKVGLINLQTKVTEA 344

Query: 568 AQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGST 627
           A +I   LKS    +  D  +E++  K     +  +P  II G K  SE  + ++   + 
Sbjct: 345 ADKIYKALKS--DEVLYDDTDESVGVKFARMDLIGLPWQIIIGKKAVSENIVEVKNRATG 402

Query: 628 TTQKVSLLDAIPILT 642
             +++ + +AI   +
Sbjct: 403 EVEEIQVEEAINRFS 417


>gi|218529196|ref|YP_002420012.1| prolyl-tRNA synthetase [Methylobacterium chloromethanicum CM4]
 gi|254782907|sp|B7KPK1|SYP_METC4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|218521499|gb|ACK82084.1| prolyl-tRNA synthetase [Methylobacterium chloromethanicum CM4]
          Length = 441

 Score =  205 bits (520), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 80/436 (18%), Positives = 144/436 (33%), Gaps = 42/436 (9%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTP 297
           +E+E   HR + R   +    ++ +G+  W   G ++   +   +R  + +    EI  P
Sbjct: 16  KEAEIISHRLMLRAGMIR---QEAAGIYAWLPLGLRVLNKVCDVVRAEQDRAGAIEILMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW++SG +++Y   M  +K      +  R     P        +F    +SY++
Sbjct: 73  TIQAADLWRESGRYEAYGKEMLRLKD-----RHERELLYGPTAEEVVTEIFRASTRSYKD 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYK 416
           LP  L +    +R+E      G MR R F   D + F   +        K+    +  ++
Sbjct: 128 LPKNLYQISWKFRDEVRPRF-GTMRSREFLMKDGYSFDIDQAAARHSYNKVFVSYLRTFE 186

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA--- 473
             G   I ++  T P     S      A+     V               V   + A   
Sbjct: 187 RLGLRAIPMRADTGPIGGDLSHEFIILAKTGESEVFCDQAYLDMPVPPPSVDFDDVAGLQ 246

Query: 474 --------FYGPKFEYILKDA----------IGRDWQCGTIQV-DFNLPSRFNAFYVNSH 514
                    Y    E   +              R  + G I        +   A      
Sbjct: 247 GVVDAWTSHYAATDEMHDEAVFAEVPEASRLSARGIEVGHIFYFGTKYSTPMKAVVTGPD 306

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTT--ITSSAVEYA 568
                PV +     G   R +   IE          P  ++P    +    +   A + A
Sbjct: 307 GS-ERPVHMGSYGIG-PSRLVAATIEASHDEAGIIWPDAIAPFDVALINLKVGDGACDTA 364

Query: 569 -QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGST 627
             EI   L++  LS+  D R+E    K     +  +P  +I G K  +E  I ++R  S 
Sbjct: 365 CAEIQAALETAGLSVLYDDRDERPGAKFATADLIGLPWQVIVGPKGLAEGKIELKRRASG 424

Query: 628 TTQKVSLLDAIPILTK 643
             + +  +D    + +
Sbjct: 425 ERETLDPVDLPARIRR 440


>gi|163850499|ref|YP_001638542.1| prolyl-tRNA synthetase [Methylobacterium extorquens PA1]
 gi|226701309|sp|A9W1L5|SYP_METEP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|163662104|gb|ABY29471.1| prolyl-tRNA synthetase [Methylobacterium extorquens PA1]
          Length = 441

 Score =  205 bits (520), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 80/436 (18%), Positives = 144/436 (33%), Gaps = 42/436 (9%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTP 297
           +E+E   HR + R   +    ++ +G+  W   G ++   +   +R  + +    EI  P
Sbjct: 16  KEAEIVSHRLMLRAGMIR---QEAAGIYAWLPLGLRVLNKVCDVVRAEQDRAGAIEILMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW++SG +++Y   M  +K      +  R     P        +F    +SY++
Sbjct: 73  TIQAADLWRESGRYEAYGKEMLRLKD-----RHERELLYGPTAEEVVTEIFRASTRSYKD 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYK 416
           LP  L +    +R+E      G MR R F   D + F   +        K+    +  ++
Sbjct: 128 LPKNLYQISWKFRDEVRPRF-GTMRSREFLMKDGYSFDIDQAAARHSYNKVFVSYLRTFE 186

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA--- 473
             G   I ++  T P     S      A+     V               V   + A   
Sbjct: 187 RLGLRAIPMRADTGPIGGDLSHEFIILAKTGESEVFCDQAYLDMPVPPPSVDFDDVAGLQ 246

Query: 474 --------FYGPKFEYILKDA----------IGRDWQCGTIQV-DFNLPSRFNAFYVNSH 514
                    Y    E   +              R  + G I        +   A      
Sbjct: 247 GVVDAWTSHYAATDEMHDEAVFAEVPEASRLSARGIEVGHIFYFGTKYSTPMKAVVTGPD 306

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTT--ITSSAVEYA 568
                PV +     G   R +   IE          P  ++P    +    +   A + A
Sbjct: 307 GS-ERPVHMGSYGIG-PSRLVAATIEASHDEAGIIWPDAIAPFDVALINLKVGDGACDTA 364

Query: 569 -QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGST 627
             EI   L++  LS+  D R+E    K     +  +P  +I G K  +E  I ++R  S 
Sbjct: 365 CAEIQAALETAGLSVLYDDRDERPGAKFATADLIGLPWQVIVGPKGLAEGKIELKRRASG 424

Query: 628 TTQKVSLLDAIPILTK 643
             + +  +D    + +
Sbjct: 425 ERETLDPVDLPARIRR 440


>gi|225627317|ref|ZP_03785354.1| prolyl-tRNA synthetase [Brucella ceti str. Cudo]
 gi|225617322|gb|EEH14367.1| prolyl-tRNA synthetase [Brucella ceti str. Cudo]
          Length = 445

 Score =  205 bits (520), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 76/445 (17%), Positives = 150/445 (33%), Gaps = 50/445 (11%)

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEI 294
              +E+E   HR + R   +    +  +G+  W   G K+   + + +R +       EI
Sbjct: 16  ENPKEAEIVSHRLMLRSGMIR---QQSAGIYSWLPIGLKVLNKVCTIIREEQNRAGANEI 72

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
             P +    LW++SG +D+Y   M  ++      +  R     P N      +F   ++S
Sbjct: 73  LMPTIQSADLWRESGRYDAYGKEMLRIQD-----RQEREMLFGPTNEEMVTDIFRSYVRS 127

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIIS 413
           Y++LP+ L      +R+E      G+MR R F   DA+ F    E       ++    + 
Sbjct: 128 YKDLPLNLYHIQWKFRDEVRPRF-GVMRSREFLMKDAYSFDLDYEGAKMAYYRMFVSYLR 186

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV---------------------- 451
            +   G + I ++  T P     S      AE     V                      
Sbjct: 187 TFARVGLQAIPMRADTGPIGGDLSHEFIILAETGESQVYCDRAYLDLAVPGADTDFRNDA 246

Query: 452 -LDTIKNSSQDRINTGVLLGEGAFYG-PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNA 508
            L  I             + + A +   K E  +     R  + G I            A
Sbjct: 247 QLTDIVTRWTTPYAATDEMHDEADWAKVKPESQVSA---RGIEVGHIFHFGTKYSEPMGA 303

Query: 509 FYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN----LPLWLSPIQAIVT---TI 560
                  ++    ++    +G    R +   IE    +     P  ++P  A +      
Sbjct: 304 KVQGPDGKEH---LVSMGSYGIGPSRLVAAAIEASHDDAGIIWPKAIAPFGAGIVNMKPG 360

Query: 561 TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
                  ++++   L +  +    D ++E    K     +  +P  +I G +  +   + 
Sbjct: 361 DEGCDGVSEKLYEALTNAGVDPLLDDKDERPGAKFATMDLIGLPTQVIVGPRGVAAGEVE 420

Query: 621 IRRFGSTTTQKVSLLDAIPILTKES 645
           ++   +   Q + +  AI +LT ++
Sbjct: 421 VKDRKTGERQSLGIEAAINMLTAQA 445


>gi|163843095|ref|YP_001627499.1| prolyl-tRNA synthetase [Brucella suis ATCC 23445]
 gi|254706964|ref|ZP_05168792.1| prolyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|254709928|ref|ZP_05171739.1| prolyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|256031421|ref|ZP_05445035.1| prolyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
 gi|256159542|ref|ZP_05457310.1| prolyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|256254829|ref|ZP_05460365.1| prolyl-tRNA synthetase [Brucella ceti B1/94]
 gi|260168555|ref|ZP_05755366.1| prolyl-tRNA synthetase [Brucella sp. F5/99]
 gi|261222010|ref|ZP_05936291.1| prolyl-tRNA synthetase [Brucella ceti B1/94]
 gi|261314427|ref|ZP_05953624.1| prolyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|261317474|ref|ZP_05956671.1| prolyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|261758028|ref|ZP_06001737.1| prolyl-tRNA synthetase [Brucella sp. F5/99]
 gi|265988510|ref|ZP_06101067.1| prolyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
 gi|265997974|ref|ZP_06110531.1| prolyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|189083490|sp|B0CLE9|SYP_BRUSI RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|163673818|gb|ABY37929.1| prolyl-tRNA synthetase [Brucella suis ATCC 23445]
 gi|260920594|gb|EEX87247.1| prolyl-tRNA synthetase [Brucella ceti B1/94]
 gi|261296697|gb|EEY00194.1| prolyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|261303453|gb|EEY06950.1| prolyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|261738012|gb|EEY26008.1| prolyl-tRNA synthetase [Brucella sp. F5/99]
 gi|262552442|gb|EEZ08432.1| prolyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|264660707|gb|EEZ30968.1| prolyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
          Length = 442

 Score =  205 bits (520), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 76/445 (17%), Positives = 150/445 (33%), Gaps = 50/445 (11%)

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEI 294
              +E+E   HR + R   +    +  +G+  W   G K+   + + +R +       EI
Sbjct: 13  ENPKEAEIVSHRLMLRSGMIR---QQSAGIYSWLPIGLKVLNKVCTIIREEQNRAGANEI 69

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
             P +    LW++SG +D+Y   M  ++      +  R     P N      +F   ++S
Sbjct: 70  LMPTIQSADLWRESGRYDAYGKEMLRIQD-----RQEREMLFGPTNEEMVTDIFRSYVRS 124

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIIS 413
           Y++LP+ L      +R+E      G+MR R F   DA+ F    E       ++    + 
Sbjct: 125 YKDLPLNLYHIQWKFRDEVRPRF-GVMRSREFLMKDAYSFDLDYEGAKMAYYRMFVSYLR 183

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV---------------------- 451
            +   G + I ++  T P     S      AE     V                      
Sbjct: 184 TFARVGLQAIPMRADTGPIGGDLSHEFIILAETGESQVYCDRAYLDLAVPGADTDFRNDA 243

Query: 452 -LDTIKNSSQDRINTGVLLGEGAFYG-PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNA 508
            L  I             + + A +   K E  +     R  + G I            A
Sbjct: 244 QLTDIVTRWTTPYAATDEMHDEADWAKVKPESQVSA---RGIEVGHIFHFGTKYSEPMGA 300

Query: 509 FYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN----LPLWLSPIQAIVT---TI 560
                  ++    ++    +G    R +   IE    +     P  ++P  A +      
Sbjct: 301 KVQGPDGKEH---LVSMGSYGIGPSRLVAAAIEASHDDAGIIWPKAIAPFGAGIVNMKPG 357

Query: 561 TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
                  ++++   L +  +    D ++E    K     +  +P  +I G +  +   + 
Sbjct: 358 DEGCDGVSEKLYEALTNAGVDPLLDDKDERPGAKFATMDLIGLPTQVIVGPRGVAAGEVE 417

Query: 621 IRRFGSTTTQKVSLLDAIPILTKES 645
           ++   +   Q + +  AI +LT ++
Sbjct: 418 VKDRKTGERQSLGIEAAINMLTAQA 442


>gi|294852177|ref|ZP_06792850.1| prolyl-tRNA synthetase [Brucella sp. NVSL 07-0026]
 gi|294820766|gb|EFG37765.1| prolyl-tRNA synthetase [Brucella sp. NVSL 07-0026]
          Length = 435

 Score =  205 bits (520), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 76/450 (16%), Positives = 151/450 (33%), Gaps = 50/450 (11%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
           +       +E+E   HR + R   +    +  +G+  W   G K+   + + +R +    
Sbjct: 1   MPILKENPKEAEIVSHRLMLRSGMIR---QQSAGIYSWLPIGLKVLNKVCTIIREEQNRA 57

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
              EI  P +    LW++SG +D+Y   M  ++      +  R     P N      +F 
Sbjct: 58  GANEILMPTIQSADLWRESGRYDAYGKEMLRIQD-----RQEREMLFGPTNEEMVTDIFR 112

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIH 408
             ++SY++LP+ L      +R+E      G+MR R F   DA+ F    E       ++ 
Sbjct: 113 SYVRSYKDLPLNLYHIQWKFRDEVRPRF-GVMRSREFLMKDAYSFDLDYEGAKMAYYRMF 171

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV----------------- 451
              +  +   G + I ++  T P     S      AE     V                 
Sbjct: 172 VSYLRTFARVGLQAIPMRADTGPIGGDLSHEFIILAETGESQVYCDRAYLDLAVPGADTD 231

Query: 452 ------LDTIKNSSQDRINTGVLLGEGAFYG-PKFEYILKDAIGRDWQCGTI-QVDFNLP 503
                 L  I             + + A +   K E  +     R  + G I        
Sbjct: 232 FRNDAQLTDIVTRWTTPYAATDEMHDEADWAKVKPESQVSA---RGIEVGHIFHFGTKYS 288

Query: 504 SRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN----LPLWLSPIQAIVT 558
               A       ++    ++    +G    R +   IE    +     P  ++P  A + 
Sbjct: 289 EPMGAKVQGPDGKEH---LVSMGSYGIGPSRLVAAAIEASHDDAGIIWPKAIAPFGAGIV 345

Query: 559 ---TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEAS 615
                       ++++   L +  +    D ++E    K     +  +P  +I G +  +
Sbjct: 346 NMKPGDEGCDGVSEKLYEALTNAGVDPLLDDKDERPGAKFATMDLIGLPTQVIVGPRGVA 405

Query: 616 ERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
              + ++   +   Q + +  AI +LT ++
Sbjct: 406 AGEVEVKDRKTGERQSLGIEAAINMLTAQA 435


>gi|294495462|ref|YP_003541955.1| prolyl-tRNA synthetase [Methanohalophilus mahii DSM 5219]
 gi|292666461|gb|ADE36310.1| prolyl-tRNA synthetase [Methanohalophilus mahii DSM 5219]
          Length = 478

 Score =  205 bits (520), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 75/417 (17%), Positives = 160/417 (38%), Gaps = 56/417 (13%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQ 298
           +++    + +L +   +  +     G+  WH  G+ I +   S MR  +  D+EE   P 
Sbjct: 13  KDNFSEWYNELLQIAKIMDVRYPVKGLYVWHPFGFTIRKKTYSIMRELLDRDHEETMFPL 72

Query: 299 VLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           ++ +H + +++ H   +   ++ V     +  ++   AL+P +      ++   ++S+ +
Sbjct: 73  LIPEHEFMKEAQHIKGFEEEVYWVTHGGTSPLEV-NLALRPTSETAIYPMYKLWVRSHAD 131

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFT-QDDAHVFC-TKEQMFNECLKIHNLIISIY 415
           LP+RL +  + +R E       L+R+R  T   +AH    T E   ++  +   +    Y
Sbjct: 132 LPLRLYQIVNTFRYETK-HTRPLIRLREITSFKEAHTVHATWEDAASQIDEAMRIYKEFY 190

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           +      +  K              WD                             GA Y
Sbjct: 191 RRLAIPVLSSKRPE-----------WDKF--------------------------PGADY 213

Query: 476 GPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
               + ++ D  GR  Q GT   +  N    F   Y +S  E+   V  H+A +G  ER 
Sbjct: 214 TIAVDSLMPD--GRTLQVGTAHHLGDNFAKTFEITYEDSEGEQ---VYAHQACYGVSERC 268

Query: 535 IGIMIENFKGNLPLWL----SPIQAIVTTIT----SSAVEYAQEIANLLKSHHLSIETDF 586
           +  +I     +  L L    +P+Q ++  I        +   + +A  LK   + ++ D 
Sbjct: 269 LAALISTHGDDKGLVLPPEVAPVQVVIIPIIFKKPEEVLSACEMVAEDLKDAGIKVKIDD 328

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            ++    K  +  ++ +PI +  G ++   ++  + R  +   +++ L D    +  
Sbjct: 329 SDKRPGAKYYKWEMQGVPIRLEIGPRDLKNQAAMMARRDTGEKEQIPLEDISSTIKD 385


>gi|240137564|ref|YP_002962035.1| proline-tRNA ligase [Methylobacterium extorquens AM1]
 gi|240007532|gb|ACS38758.1| proline-tRNA ligase [Methylobacterium extorquens AM1]
          Length = 442

 Score =  205 bits (520), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 80/436 (18%), Positives = 144/436 (33%), Gaps = 42/436 (9%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTP 297
           +E+E   HR + R   +    ++ +G+  W   G ++   +   +R  + +    EI  P
Sbjct: 17  KEAEIVSHRLMLRAGMIR---QEAAGIYAWLPLGLRVLNKVCDVVRAEQDRAGAIEILMP 73

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW++SG +++Y   M  +K      +  R     P        +F    +SY++
Sbjct: 74  TIQAADLWRESGRYEAYGKEMLRLKD-----RHERELLYGPTAEEVVTEIFRASTRSYKD 128

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYK 416
           LP  L +    +R+E      G MR R F   D + F   +        K+    +  ++
Sbjct: 129 LPKNLYQISWKFRDEVRPRF-GTMRSREFLMKDGYSFDIDQAAARHSYNKVFVSYLRTFE 187

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA--- 473
             G   I ++  T P     S      A+     V               V   + A   
Sbjct: 188 RLGLRAIPMRADTGPIGGDLSHEFIILAKTGESEVFCDQAYLDMPVPPPSVDFDDVAGLQ 247

Query: 474 --------FYGPKFEYILKDA----------IGRDWQCGTIQV-DFNLPSRFNAFYVNSH 514
                    Y    E   +              R  + G I        +   A      
Sbjct: 248 GVVDAWTSHYAATDEMHDEAVFAEVPEASRLSARGIEVGHIFYFGTKYSTPMKAVVTGPD 307

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTT--ITSSAVEYA 568
                PV +     G   R +   IE          P  ++P    +    +   A + A
Sbjct: 308 GS-ERPVHMGSYGIG-PSRLVAATIEASHDEAGIIWPDAIAPFDVALINLKVGDGACDTA 365

Query: 569 -QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGST 627
             EI   L++  LS+  D R+E    K     +  +P  +I G K  +E  I ++R  S 
Sbjct: 366 CAEIQAALETAGLSVLYDDRDERPGAKFATADLIGLPWQVIVGPKGLAEGKIELKRRASG 425

Query: 628 TTQKVSLLDAIPILTK 643
             + +  +D    + +
Sbjct: 426 ERETLDPVDLPARIRR 441


>gi|327401992|ref|YP_004342831.1| Prolyl-tRNA synthetase [Archaeoglobus veneficus SNP6]
 gi|327317500|gb|AEA48116.1| Prolyl-tRNA synthetase [Archaeoglobus veneficus SNP6]
          Length = 482

 Score =  205 bits (520), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 81/428 (18%), Positives = 160/428 (37%), Gaps = 61/428 (14%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDY 291
                  +E+    + ++ ++  +  I     G+  W+  G+KI Q +   +R  +  D+
Sbjct: 5   KSESLPPKENFSEWYHEIIQQAQIMDIRYPVKGLYVWYPFGFKIRQLVYGKLREIMDRDH 64

Query: 292 EEINTPQVLDQ-HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH 350
           +E+  P ++ +  L ++  H   +   ++ V     T  D++  AL+P +      +F  
Sbjct: 65  DEVYFPALIPETELGREGEHIKGFEDEVYWVTHGGLTPLDVK-LALRPTSETAMYPMFKL 123

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT-QDDAHVFCTK-EQMFNECLKIH 408
            ++S+ +LP+++ +  + +R E       L+R+R  T   +AH      E+   +  K  
Sbjct: 124 WIRSHADLPLKVYQIVNTFRYETK-HTRPLIRLREITSFKEAHTVHRTFEEAEEQVRKAV 182

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
                 Y       ++++              WD                          
Sbjct: 183 GYYKEFYDFLAIPYLVIRRPE-----------WDKF------------------------ 207

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAV 527
              GA Y   F+ ++ D  GR  Q GT+  +  N    F   Y     E       H+  
Sbjct: 208 --PGAAYTIAFDTVMPD--GRTMQIGTVHHLGDNFARTFGITYEKPDGE---HEFAHQTC 260

Query: 528 FGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI-----TSSAVEYAQEIANLLKSH 578
           +G  ER I  +I    ++    LP  +SP Q ++  +         +E  ++I + LK  
Sbjct: 261 YGISERCIAALISIHGDDLGLILPFEVSPTQIVIIPVLYKGKEKEVLELCEKIFDRLKGF 320

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
              +  D  +E    K     +K   + I  G KE +E ++ +         K+S+ +  
Sbjct: 321 GYRVLLDDSDERPGAKYYRWELKGAAMRIEVGPKEVAENAVVVSFRDERKKFKISVEE-- 378

Query: 639 PILTKESL 646
             LTKE +
Sbjct: 379 --LTKERI 384


>gi|254560035|ref|YP_003067130.1| proline-tRNA ligase [Methylobacterium extorquens DM4]
 gi|254267313|emb|CAX23145.1| proline-tRNA ligase [Methylobacterium extorquens DM4]
          Length = 442

 Score =  205 bits (520), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 80/436 (18%), Positives = 144/436 (33%), Gaps = 42/436 (9%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTP 297
           +E+E   HR + R   +    ++ +G+  W   G ++   +   +R  + +    EI  P
Sbjct: 17  KEAEIVSHRLMLRAGMIR---QEAAGIYAWLPLGLRVLNKVCDVVRAEQDRAGAIEILMP 73

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW++SG +++Y   M  +K      +  R     P        +F    +SY++
Sbjct: 74  TIQAADLWRESGRYEAYGKEMLRLKD-----RHERELLYGPTAEEVVTEIFRASTRSYKD 128

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYK 416
           LP  L +    +R+E      G MR R F   D + F   +        K+    +  ++
Sbjct: 129 LPKNLYQISWKFRDEVRPRF-GTMRSREFLMKDGYSFDIDQAAARHSYNKVFVSYLRTFE 187

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA--- 473
             G   I ++  T P     S      A+     V               V   + A   
Sbjct: 188 RLGLRAIPMRADTGPIGGDLSHEFIILAKTGESEVFCDQAYLDMPVPPPSVDFDDVAGLQ 247

Query: 474 --------FYGPKFEYILKDA----------IGRDWQCGTIQV-DFNLPSRFNAFYVNSH 514
                    Y    E   +              R  + G I        +   A      
Sbjct: 248 GVVDAWTSHYAATDEMHDEAVFAEVPEASRLSARGIEVGHIFYFGTKYSTPMKAVVTGPD 307

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTT--ITSSAVEYA 568
                PV +     G   R +   IE          P  ++P    +    +   A + A
Sbjct: 308 GS-ERPVHMGSYGIG-PSRLVAATIEASHDEAGIIWPDAIAPFDVALINLKVGDGACDAA 365

Query: 569 -QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGST 627
             EI   L++  LS+  D R+E    K     +  +P  +I G K  +E  I ++R  S 
Sbjct: 366 CAEIQAALETAGLSVLYDDRDERPGAKFATADLIGLPWQVIVGPKGLAEGKIELKRRASG 425

Query: 628 TTQKVSLLDAIPILTK 643
             + +  +D    + +
Sbjct: 426 ERETLDPVDLPARIRR 441


>gi|284161870|ref|YP_003400493.1| prolyl-tRNA synthetase [Archaeoglobus profundus DSM 5631]
 gi|284011867|gb|ADB57820.1| prolyl-tRNA synthetase [Archaeoglobus profundus DSM 5631]
          Length = 476

 Score =  205 bits (520), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 73/410 (17%), Positives = 157/410 (38%), Gaps = 57/410 (13%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQ 298
           +E+    + ++ ++ ++  I     G+  W   G+KI Q + + +R  +  D++E+  P 
Sbjct: 11  KENFSEWYHEVIQQAEIMDIRYPVKGLYVWLPFGFKIRQLVYAKLRELLDRDHQEVYFPT 70

Query: 299 VLDQHL-WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           ++ + +  ++S H   +   ++ V        D++  AL+P +      +F   ++S+ +
Sbjct: 71  LIPEDMLMKESKHIKGFEDEVYWVTHGGLEPLDVK-LALRPTSETAMYPMFKLWIRSHAD 129

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFT-QDDAHVFCTK-EQMFNECLKIHNLIISIY 415
           LP+++ +  +V+R E       L+R+R  T   +AH      E+   +  +   L    Y
Sbjct: 130 LPLKVYQIVNVFRYETK-HTRPLIRLREVTSFKEAHTVHRTYEEAEEQVRQAVKLYKEFY 188

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                  ++ +              WD                             GA Y
Sbjct: 189 DFLAIPYLVFRRPE-----------WDKF--------------------------PGADY 211

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
               + I+ D  GR  Q GT+    +  +R   F +   + +      H+  +G  ER I
Sbjct: 212 TIALDTIMPD--GRTLQIGTVHNLADNFAR--TFEIKYETPEGDHAYAHQTCYGISERCI 267

Query: 536 GIMI----ENFKGNLPLWLSPIQAIVTTI-----TSSAVEYAQEIANLLKSHHLSIETDF 586
             +I    ++    LP  ++P+Q ++  I         +E ++++   LK     +  D 
Sbjct: 268 ASLISIHGDDLGLVLPFEVAPVQIVIIPILYKGKEEKVMELSRKLYERLKC--FRVVLDD 325

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
            +E    K  +  +K +PI    G +EA    + +          V+  +
Sbjct: 326 SDERPGAKYYKWELKGVPIRFEIGPREAENGEVVVSFRDERKKFSVTFDE 375


>gi|256369253|ref|YP_003106761.1| prolyl-tRNA synthetase [Brucella microti CCM 4915]
 gi|255999413|gb|ACU47812.1| prolyl-tRNA synthetase [Brucella microti CCM 4915]
          Length = 442

 Score =  204 bits (519), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 76/445 (17%), Positives = 150/445 (33%), Gaps = 50/445 (11%)

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEI 294
              +E+E   HR + R   +    +  +G+  W   G K+   + + +R +       EI
Sbjct: 13  ENPKEAEIVSHRLMLRSGMIR---QQSAGIYSWLPIGLKVLNKVCTIIREEQNRAGANEI 69

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
             P +    LW++SG +D+Y   M  ++      +  R     P N      +F   ++S
Sbjct: 70  LMPTIQSADLWRESGRYDAYGKEMLCIQD-----RQEREMLFGPTNEEMVTDIFRSYVRS 124

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIIS 413
           Y++LP+ L      +R+E      G+MR R F   DA+ F    E       ++    + 
Sbjct: 125 YKDLPLNLYHIQWKFRDEVRPRF-GVMRSREFLMKDAYSFDLDYEGAKMAYYRMFVSYLR 183

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV---------------------- 451
            +   G + I ++  T P     S      AE     V                      
Sbjct: 184 TFARVGLQAIPMRADTGPIGGDLSHEFIILAETGESQVYCDRAYLDLAVPGADTDFRNDA 243

Query: 452 -LDTIKNSSQDRINTGVLLGEGAFYG-PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNA 508
            L  I             + + A +   K E  +     R  + G I            A
Sbjct: 244 QLTDIVTRWTTPYAATDEMHDEADWAKVKPESQVSA---RGIEVGHIFHFGTKYSEPMGA 300

Query: 509 FYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN----LPLWLSPIQAIVT---TI 560
                  ++    ++    +G    R +   IE    +     P  ++P  A +      
Sbjct: 301 KVQGPDGKEH---LVSMGSYGIGPSRLVAAAIEASHDDAGIIWPKAIAPFGAGIVNMKPG 357

Query: 561 TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
                  ++++   L +  +    D ++E    K     +  +P  +I G +  +   + 
Sbjct: 358 DEGCDGVSEKLYEALTNAGVDPLLDDKDERPGAKFATMDLIGLPTQVIVGPRGVAAGEVE 417

Query: 621 IRRFGSTTTQKVSLLDAIPILTKES 645
           ++   +   Q + +  AI +LT ++
Sbjct: 418 VKDRKTGERQSLGIEAAINMLTAQA 442


>gi|256060932|ref|ZP_05451090.1| prolyl-tRNA synthetase [Brucella neotomae 5K33]
 gi|261324932|ref|ZP_05964129.1| prolyl-tRNA synthetase [Brucella neotomae 5K33]
 gi|261300912|gb|EEY04409.1| prolyl-tRNA synthetase [Brucella neotomae 5K33]
          Length = 442

 Score =  204 bits (519), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 74/447 (16%), Positives = 153/447 (34%), Gaps = 54/447 (12%)

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEI 294
              +E+E   HR + R   +    +  +G+  W   G K+   + + +R +       EI
Sbjct: 13  ENPKEAEIVSHRLMLRSGMIR---QQSAGIYSWLPIGLKVLNKVCTIIREEQNRAGANEI 69

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
             P +    LW++SG +D+Y   M  ++      +  R     P N      +F   ++S
Sbjct: 70  LMPTIQSADLWRESGRYDAYGKEMLRIQD-----RQEREMLFGPTNEEMVTDIFRSYVRS 124

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIIS 413
           Y++LP+ L      +R+E      G+MR R F   DA+ F    E       ++    + 
Sbjct: 125 YKDLPLNLYHIQWKFRDEVRPRF-GVMRSREFLMKDAYSFDLDYEGAKMAYYRMFVSYLR 183

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
            +   G + I ++  T P     S         I+ G  ++     +  ++  V   +  
Sbjct: 184 TFARVGLQAIPMRADTGPIGGDLSHEF-----IILAGTGESQVYCDRAYLDLAVPGADTD 238

Query: 474 F----------------YGPKFEYILKD----------AIGRDWQCGTI-QVDFNLPSRF 506
           F                Y    E   +              R  + G I           
Sbjct: 239 FRNDAQLTDIVTRWTTPYAATDEMHDEADWAKVKPESQVSARGIEVGHIFHFGTKYSEPM 298

Query: 507 NAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN----LPLWLSPIQAIVTTI- 560
            A       ++    ++    +G    R +   IE    +     P  ++P  A +  + 
Sbjct: 299 GAKVQGPDGKEH---LVSMGSYGIGPSRLVAAAIEASHDDAGIIWPKAIAPFGAGIVNMK 355

Query: 561 --TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERS 618
                    ++++   L +  +    D ++E    K     +  +P  +I G +  +   
Sbjct: 356 LGDEGCDGVSEKLYEALTNAGVDPLLDDKDERPGAKFATMDLIGLPTQVIVGPRGVAAGE 415

Query: 619 IGIRRFGSTTTQKVSLLDAIPILTKES 645
           + ++   +   Q + +  AI +LT ++
Sbjct: 416 VEVKDRKTGERQSLGIEAAINMLTAQA 442


>gi|254689076|ref|ZP_05152330.1| prolyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
 gi|254693559|ref|ZP_05155387.1| prolyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
 gi|256257325|ref|ZP_05462861.1| prolyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|260754574|ref|ZP_05866922.1| prolyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
 gi|260883601|ref|ZP_05895215.1| prolyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|261213824|ref|ZP_05928105.1| prolyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
 gi|297248174|ref|ZP_06931892.1| prolyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196]
 gi|260674682|gb|EEX61503.1| prolyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
 gi|260873129|gb|EEX80198.1| prolyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|260915431|gb|EEX82292.1| prolyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
 gi|297175343|gb|EFH34690.1| prolyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196]
          Length = 442

 Score =  204 bits (519), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 76/445 (17%), Positives = 150/445 (33%), Gaps = 50/445 (11%)

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEI 294
              +E+E   HR + R   +    +  +G+  W   G K+   + + +R +       EI
Sbjct: 13  ENPKEAEIVSHRLMLRSGMIR---QQSAGIYSWLPIGLKVLNKVCTIIREEQNRAGANEI 69

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
             P +    LW++SG +D+Y   M  ++      +  R     P N      +F   ++S
Sbjct: 70  LMPTIQSADLWRESGRYDAYGKEMLRIQD-----RQKREMLFGPTNEEMVTDIFRSYVRS 124

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIIS 413
           Y++LP+ L      +R+E      G+MR R F   DA+ F    E       ++    + 
Sbjct: 125 YKDLPLNLYHIQWKFRDEVRPRF-GVMRSREFLMKDAYSFDLDYEGAKMAYYRMFVSYLR 183

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV---------------------- 451
            +   G + I ++  T P     S      AE     V                      
Sbjct: 184 TFARVGLQAIPMRADTGPIGGDLSHEFIILAETGESQVYCDRAYLDLAVPGADTDFRNDA 243

Query: 452 -LDTIKNSSQDRINTGVLLGEGAFYG-PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNA 508
            L  I             + + A +   K E  +     R  + G I            A
Sbjct: 244 QLTDIVTRWTTPYAATDEMHDEADWAKVKPESQVSA---RGIEVGHIFHFGTKYSEPMGA 300

Query: 509 FYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGNLPLWL---SPIQAIVT---TI 560
                  ++    ++    +G    R +   IE +      +W    +P  A +      
Sbjct: 301 KVQGPDGKEH---LVSMGSYGIGPSRLVAAAIEASHDDAGIIWPKTIAPFGAGIVNMKPG 357

Query: 561 TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
                  ++++   L +  +    D ++E    K     +  +P  +I G +  +   + 
Sbjct: 358 DEGCDGVSEKLYEALTNAGVDPLLDDKDERPGAKFATMDLIGLPTQVIVGPRGVAAGEVE 417

Query: 621 IRRFGSTTTQKVSLLDAIPILTKES 645
           ++   +   Q + +  AI +LT ++
Sbjct: 418 VKDRKTGERQSLGIEAAINMLTAQA 442


>gi|148560203|ref|YP_001258799.1| prolyl-tRNA synthetase [Brucella ovis ATCC 25840]
 gi|166980104|sp|A5VQ02|SYP_BRUO2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|148371460|gb|ABQ61439.1| prolyl-tRNA synthetase [Brucella ovis ATCC 25840]
          Length = 442

 Score =  204 bits (518), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 76/444 (17%), Positives = 148/444 (33%), Gaps = 48/444 (10%)

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEI 294
              +E+E   HR + R   +    +  +G+  W   G K+   + + +R +       EI
Sbjct: 13  ENPKEAEIVSHRLMLRSGMIR---QQSAGIYSWLPIGLKVLNKVCTIIREEQNRAGANEI 69

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
             P +    LW++SG +D+Y   M  ++      +  R     P N      +F   ++S
Sbjct: 70  LMPTIQSADLWRESGRYDAYGKEMLRIQD-----RQEREMLFGPTNEEMVTDIFRSYVRS 124

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIIS 413
           Y++LP+ L      +R+E      G+MR R F   DA+ F    E       ++    + 
Sbjct: 125 YKDLPLNLYHIQWKFRDEVRPRF-GVMRSREFLMKDAYSFDLDYEGAKMAYYRMFVSYLR 183

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV---------------------- 451
            +   G + I ++  T P     S      AE     V                      
Sbjct: 184 TFARVGLQAIPMRADTGPIGGDLSHEFIILAETGESQVYCDRAYLDLAVPGADTDFRNDA 243

Query: 452 -LDTIKNSSQDRINTGVLLGEGAFYG-PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNA 508
            L  I             + + A +   K E  +     R  + G I            A
Sbjct: 244 QLTDIVTRWTTPYAATDEMHDEADWAKVKPESQVSA---RGIEVGHIFHFGTKYSEPMGA 300

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVT---TIT 561
                  ++    M    +     R +   IE    +     P  ++P  A +       
Sbjct: 301 KVQGPDGKEHLVFMGSYGI--GPSRLVAAAIEASHDDAGIIWPKAIAPFGAGIVNMKPGD 358

Query: 562 SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
                 ++++   L +  +    D ++E    K     +  +P  +I G +  +   + +
Sbjct: 359 EGCDGVSEKLYEALTNAGVDPLLDDKDERPGAKFATMDLIGLPTQVIVGPRGVAAGEVEV 418

Query: 622 RRFGSTTTQKVSLLDAIPILTKES 645
           +   +   Q + +  AI +LT ++
Sbjct: 419 KDRKTGERQSLDIEAAINMLTAQA 442


>gi|126459705|ref|YP_001055983.1| prolyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
 gi|166980146|sp|A3MV50|SYP_PYRCJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|126249426|gb|ABO08517.1| prolyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
          Length = 487

 Score =  204 bits (518), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 80/423 (18%), Positives = 155/423 (36%), Gaps = 60/423 (14%)

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEE 293
              L  +       L RE +++ +     G   W   G KI + + + +RR   +  +EE
Sbjct: 12  REKLRSNLMEWFHWLLREAEIYDVRYPVKGAYVWRPYGMKIRRNVEALIRRLHDETGHEE 71

Query: 294 INTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           +  P  +    + ++S H   +   +F V    +         L+P +    + +    +
Sbjct: 72  VLFPVFIPYEFFGKESEHIRGFEKEVFWVSKGGEG---GERLVLRPTSETAIMPMVKLWV 128

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD-DAHVFCTKEQMFNECLKIHNLI 411
           + Y++LP+RL +  SV+R E     H ++R+R  +   +AH          +  +     
Sbjct: 129 QDYKDLPLRLYQIVSVFRAETK-MTHPMIRLREISMFKEAHTVHVD---REDAERQVREA 184

Query: 412 ISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
           + IYK    E  +  +  R          WD                             
Sbjct: 185 VEIYKRIFDEMCLAYMINRRPD-------WDKF--------------------------A 211

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           GA Y   F+ +L D  GR  Q GT+          F   Y+     +    + H   +G 
Sbjct: 212 GAVYTIAFDTVLPD--GRALQIGTVHYLGTKFTEVFEVTYLAPDGSRR---LAHTTSYGI 266

Query: 531 IERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVEY------AQEIANLLKSHHL 580
            ER I  M+    ++    +P  L+PIQ +V  I     E       A++ A  L+    
Sbjct: 267 SERSIAAMLITHGDDAGTVIPPKLAPIQVVVVPIFYGEEEKGVVMPAAEQAAKALREAGF 326

Query: 581 SIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
            +  D R++ T  +K     ++ +P+ +  G ++   R + + R  +     V++ + + 
Sbjct: 327 RVHVDGRDDKTPGWKFYYWELRGVPLRVEVGKRDVEGRQVVVARRDTLAKYAVAVDELVD 386

Query: 640 ILT 642
            + 
Sbjct: 387 AVK 389


>gi|289472550|gb|ADC97460.1| putative threonyl-tRNA synthetase [Amblyomma hebraeum]
          Length = 209

 Score =  204 bits (518), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 67/207 (32%), Positives = 98/207 (47%), Gaps = 6/207 (2%)

Query: 2   PSDIKLTFPDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
            + I +T PDG          T   +A  IS+ LA   V   +N  + DL  P+  + S+
Sbjct: 6   SAPITVTLPDGKQVPAESWKTTPYQIAAGISKGLADNVVIAKVNKVLWDLDRPLEEDCSL 65

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDE 118
           E++  ED     V  HS AH++ EA++ ++    +  GP IE GFYYD   +Q   S+ +
Sbjct: 66  ELLKFEDKEGEQVFWHSSAHVLGEALERLYGGC-LCYGPPIEGGFYYDMHLDQGGVSAVD 124

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
              IE  M+ I+    PF +  L  E    +   +   +KV IL+        T+YR G 
Sbjct: 125 HPSIEGLMRNIVKERQPFERLELPKEDLLRM--FQYNPFKVRILQEKVQTPTTTVYRCGP 182

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAG 205
             DLCRGPHVR TG+VK        + 
Sbjct: 183 LIDLCRGPHVRHTGKVKALHVTKNSSA 209


>gi|254701588|ref|ZP_05163416.1| prolyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
 gi|261752141|ref|ZP_05995850.1| prolyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
 gi|261741894|gb|EEY29820.1| prolyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
          Length = 442

 Score =  203 bits (517), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 76/445 (17%), Positives = 149/445 (33%), Gaps = 50/445 (11%)

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEI 294
              +E+E   HR + R   +    +  +G+  W   G K+   + + +R +       EI
Sbjct: 13  ENPKEAEIVSHRLMLRSGMIR---QQSAGIYSWLPIGLKVLNKVCTIIREEQNRAGANEI 69

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
             P +    LW++SG +D+Y   M  ++      +  R     P N      +F   ++S
Sbjct: 70  LMPTIQSADLWRESGRYDAYGKEMLRIQD-----RQEREMLFGPTNEEMVTDIFRSYVRS 124

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIIS 413
           Y++LP+ L      +R+E      G+MR R F   DA+ F    E       ++    + 
Sbjct: 125 YKDLPLNLYHIQWKFRDEVRPRF-GVMRSREFLMKDAYSFDLDYEGAKMAYYRMFVSYLR 183

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV---------------------- 451
            +   G + I ++  T P     S      AE     V                      
Sbjct: 184 TFARVGLQAIPMRADTGPIGGDLSHEFIILAETGESQVYCDRAYLDLAVPGADTDFRNDA 243

Query: 452 -LDTIKNSSQDRINTGVLLGEGAFYG-PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNA 508
            L  I             + + A +   K E  +     R  + G I            A
Sbjct: 244 QLTDIVTRWTTPYAATDEMHDEADWAKVKPESQVSA---RGIEVGHIFHFGTKYSEPMGA 300

Query: 509 FYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN----LPLWLSPIQAIVT---TI 560
                  ++    ++    +G    R +   IE    +     P  ++P  A +      
Sbjct: 301 KVQGPDGKEH---LVSMGSYGIGPSRLVAAAIEASHDDAGIIWPKAIAPFGAGIVNMKPG 357

Query: 561 TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
                  +++    L +  +    D ++E    K     +  +P  +I G +  +   + 
Sbjct: 358 DEGCDGVSEKFYEALTNAGVDPLLDDKDERPGAKFATMDLIGLPTQVIVGPRGVAAGEVE 417

Query: 621 IRRFGSTTTQKVSLLDAIPILTKES 645
           ++   +   Q + +  AI +LT ++
Sbjct: 418 VKDRKTGERQSLGIEAAINMLTAQA 442


>gi|225852336|ref|YP_002732569.1| prolyl-tRNA synthetase [Brucella melitensis ATCC 23457]
 gi|256044499|ref|ZP_05447403.1| prolyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|256113355|ref|ZP_05454213.1| prolyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|256264165|ref|ZP_05466697.1| prolyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9]
 gi|260563853|ref|ZP_05834339.1| prolyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|265990923|ref|ZP_06103480.1| prolyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|265994761|ref|ZP_06107318.1| prolyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|114152175|sp|Q8YGL8|SYP_BRUME RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|254782889|sp|C0RIF7|SYP_BRUMB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|225640701|gb|ACO00615.1| prolyl-tRNA synthetase [Brucella melitensis ATCC 23457]
 gi|260153869|gb|EEW88961.1| prolyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|262765874|gb|EEZ11663.1| prolyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|263001707|gb|EEZ14282.1| prolyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|263094383|gb|EEZ18228.1| prolyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9]
 gi|326408844|gb|ADZ65909.1| prolyl-tRNA synthetase [Brucella melitensis M28]
 gi|326538559|gb|ADZ86774.1| prolyl-tRNA synthetase [Brucella melitensis M5-90]
          Length = 442

 Score =  203 bits (517), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 74/447 (16%), Positives = 151/447 (33%), Gaps = 54/447 (12%)

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEI 294
              +E+E   HR + R   +    +  +G+  W   G K+   + + +R +       EI
Sbjct: 13  ENPKEAEIVSHRLMLRSGMIR---QQSAGIYSWLPIGLKVLNKVCTIIREEQNRAGANEI 69

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
             P +    LW++SG +D+Y   M  ++      +  R     P N      +F   ++S
Sbjct: 70  LMPTIQSADLWRESGRYDAYGKEMLRIQD-----RQKREMLFGPTNEEMVTDIFRSYVRS 124

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIIS 413
           Y++LP+ L      +R+E      G+MR R F   DA+ F    E       ++    + 
Sbjct: 125 YKDLPLNLYHIQWKFRDEVRPRF-GVMRSREFLMKDAYSFDLDYEGAKMAYYRMFVSYLR 183

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
            +   G + I ++  T P     S      AE       ++     +  ++  V   +  
Sbjct: 184 TFARVGLQAIPMRADTGPIGGDLSHEFIILAETG-----ESQVYCDRAYLDLAVPGADTD 238

Query: 474 F----------------YGPKFEYILKD----------AIGRDWQCGTI-QVDFNLPSRF 506
           F                Y    E   +              R  + G I           
Sbjct: 239 FRNDAQLTDTVTRWTTPYAATDEMHDEADWAKVKPESQVSARGIEVGHIFHFGTKYSEPM 298

Query: 507 NAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGNLPLWL---SPIQAIVT--- 558
            A       ++    ++    +G    R +   IE +      +W    +P  A +    
Sbjct: 299 GAKVQGPDGKEH---LVSMGSYGIGPSRLVAAAIEASHDDAGIIWPKTIAPFGAGIVNMK 355

Query: 559 TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERS 618
                    ++++   L +  +    D ++E    K     +  +P  +I G +  +   
Sbjct: 356 PGDEGCDGVSEKLYEALTNAGVDPLLDDKDERPGAKFATIDLIGLPTQVIVGPRGVAAGE 415

Query: 619 IGIRRFGSTTTQKVSLLDAIPILTKES 645
           + ++   +   Q + +  AI +LT ++
Sbjct: 416 VEVKDRKTGERQSLGIEAAINMLTAQA 442


>gi|17987423|ref|NP_540057.1| prolyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|17983114|gb|AAL52321.1| prolyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
          Length = 445

 Score =  203 bits (517), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 74/447 (16%), Positives = 151/447 (33%), Gaps = 54/447 (12%)

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEI 294
              +E+E   HR + R   +    +  +G+  W   G K+   + + +R +       EI
Sbjct: 16  ENPKEAEIVSHRLMLRSGMIR---QQSAGIYSWLPIGLKVLNKVCTIIREEQNRAGANEI 72

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
             P +    LW++SG +D+Y   M  ++      +  R     P N      +F   ++S
Sbjct: 73  LMPTIQSADLWRESGRYDAYGKEMLRIQD-----RQKREMLFGPTNEEMVTDIFRSYVRS 127

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIIS 413
           Y++LP+ L      +R+E      G+MR R F   DA+ F    E       ++    + 
Sbjct: 128 YKDLPLNLYHIQWKFRDEVRPRF-GVMRSREFLMKDAYSFDLDYEGAKMAYYRMFVSYLR 186

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
            +   G + I ++  T P     S      AE       ++     +  ++  V   +  
Sbjct: 187 TFARVGLQAIPMRADTGPIGGDLSHEFIILAETG-----ESQVYCDRAYLDLAVPGADTD 241

Query: 474 F----------------YGPKFEYILKD----------AIGRDWQCGTI-QVDFNLPSRF 506
           F                Y    E   +              R  + G I           
Sbjct: 242 FRNDAQLTDTVTRWTTPYAATDEMHDEADWAKVKPESQVSARGIEVGHIFHFGTKYSEPM 301

Query: 507 NAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGNLPLWL---SPIQAIVT--- 558
            A       ++    ++    +G    R +   IE +      +W    +P  A +    
Sbjct: 302 GAKVQGPDGKEH---LVSMGSYGIGPSRLVAAAIEASHDDAGIIWPKTIAPFGAGIVNMK 358

Query: 559 TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERS 618
                    ++++   L +  +    D ++E    K     +  +P  +I G +  +   
Sbjct: 359 PGDEGCDGVSEKLYEALTNAGVDPLLDDKDERPGAKFATIDLIGLPTQVIVGPRGVAAGE 418

Query: 619 IGIRRFGSTTTQKVSLLDAIPILTKES 645
           + ++   +   Q + +  AI +LT ++
Sbjct: 419 VEVKDRKTGERQSLGIEAAINMLTAQA 445


>gi|293374695|ref|ZP_06621003.1| proline--tRNA ligase [Turicibacter sanguinis PC909]
 gi|325840610|ref|ZP_08167091.1| proline--tRNA ligase [Turicibacter sp. HGF1]
 gi|292646609|gb|EFF64611.1| proline--tRNA ligase [Turicibacter sanguinis PC909]
 gi|325490259|gb|EGC92592.1| proline--tRNA ligase [Turicibacter sp. HGF1]
          Length = 420

 Score =  203 bits (516), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 81/414 (19%), Positives = 164/414 (39%), Gaps = 24/414 (5%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
            ++E R H+ L R   +  +A    GV  +     ++   +   +R ++      E+  P
Sbjct: 16  SDAEIRSHQFLLRAGFIKQVAA---GVYTYLPLAKRVLNNVEGIVRDELDAIGGNELLMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +  + LW +SG WD Y + +  +   ++     R FAL P +      V    L SY++
Sbjct: 73  ALQPKELWDESGRWDVYGSELMRLTDRNN-----REFALGPTHEEVITHVVRDFLNSYKK 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYK 416
           LP+ + +  + +R+E      GLMR R F   DA+ F  T+E +            +I+ 
Sbjct: 128 LPLTVYQIQTKFRDEARPRF-GLMRGREFIMKDAYSFHATQESLDEAYNNFVKAYTNIFT 186

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
             G    MV+  +       S      AE       DTI  S+       + + +     
Sbjct: 187 RCGLNFRMVEADSGQIGGSQSAEFMALAEVGE----DTIVYSTTGSFAANIEVADLEVGA 242

Query: 477 PKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           P  + +   A  +  + G +  +        NA +++  ++K  P+++     G     +
Sbjct: 243 PSPDGVGVVAHAKGIEVGHVFKLGTKYSEPMNAVFLD-ENQKKQPIIMGCYGIGVSRVMM 301

Query: 536 GIMIENFKGNLPLWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNE 589
            ++ +N   N  +W    +P    V  +    +  +E A+ I   LK+    +  D R E
Sbjct: 302 AVIEQNNDENGMIWPKGIAPFDIHVVPVDVKKADQLEAAENIYAELKAAGFEVLLDDRKE 361

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
               K  +  +  +PI I  G +  ++  + ++   +    +V++ D +  + +
Sbjct: 362 RAGVKFSDADLIGLPIRITVG-RGIADGIVEVKVRQTGEVAEVAVADLMTFVKE 414


>gi|289472544|gb|ADC97457.1| putative threonyl-tRNA synthetase [Amblyomma americanum]
          Length = 209

 Score =  203 bits (516), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 66/207 (31%), Positives = 98/207 (47%), Gaps = 6/207 (2%)

Query: 2   PSDIKLTFPDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
            + I +T PDG          T   +A  IS+ LA   V   +N  + DL  P+  + ++
Sbjct: 6   SAPITVTLPDGKQVPAESWKTTPYQIAAGISKGLADNVVIAKVNKVLWDLDRPLEEDCTL 65

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDE 118
           E++  ED     V  HS AH++ EA++ ++    +  GP IE GFYYD   +Q   S+ +
Sbjct: 66  ELLKFEDKEGEQVFWHSSAHVLGEALERLYGGC-LCYGPPIEGGFYYDMHVDQGGVSAVD 124

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
              IE  M+ I+    PF +  L  E    +   +   +KV IL+        T+YR G 
Sbjct: 125 HPSIEGLMRNIVKERQPFERLELPKEDLLRM--FQYNPFKVRILQEKVQTPTTTVYRCGP 182

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAG 205
             DLCRGPHVR TG+VK        + 
Sbjct: 183 LIDLCRGPHVRHTGKVKALHVTKNSSA 209


>gi|255019069|ref|ZP_05291195.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL F2-515]
          Length = 188

 Score =  203 bits (515), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 93/189 (49%), Positives = 139/189 (73%), Gaps = 2/189 (1%)

Query: 39  VAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIG 97
           +A  +NG++ DL  P+  +G+IEI+TP+   +L ++RHS AH+MA+A++ ++P+V+  +G
Sbjct: 1   LAGKLNGELLDLVTPIHEDGAIEIVTPDHEDALGILRHSTAHLMAQALKRLYPDVKFGVG 60

Query: 98  PIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAY 157
           P IE GFYYD D E   S + L +IEK+MQ+I+  + P  ++ +S E+A + F++  + Y
Sbjct: 61  PAIESGFYYDIDTEAVISDESLVEIEKEMQKIVRENVPIEREVVSREEAIKRFKAIGDQY 120

Query: 158 KVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPML 217
           K+E++E+IP  E VT+Y QGE+FDLCRG HV STG+++ F KL+ VAGAYWRGDSN  ML
Sbjct: 121 KLELIEAIPEDETVTIYTQGEFFDLCRGVHVPSTGKIQVF-KLLSVAGAYWRGDSNNKML 179

Query: 218 SRIYGTAWN 226
            RIYGTA+ 
Sbjct: 180 QRIYGTAFF 188


>gi|23501709|ref|NP_697836.1| prolyl-tRNA synthetase [Brucella suis 1330]
 gi|81847158|sp|Q8G197|SYP_BRUSU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|23347633|gb|AAN29751.1| prolyl-tRNA synthetase [Brucella suis 1330]
          Length = 442

 Score =  203 bits (515), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 75/445 (16%), Positives = 148/445 (33%), Gaps = 50/445 (11%)

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEI 294
              +E+E   HR + R   +    +  +G+  W   G K+   + + +R +       EI
Sbjct: 13  ENPKEAEIVSHRLMLRSGMIR---QQSAGIYSWLPIGLKVLNKVCTIIREEQNRAGANEI 69

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
             P +    LW++SG + +Y   M  ++      +  R     P N      +F   ++S
Sbjct: 70  LMPTIQSADLWRESGRYGAYGKEMLRIQD-----RQEREMLFGPTNEEMVTDIFRSYVRS 124

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIIS 413
           Y++LP+ L      +R+E      G+MR R F   DA+ F    E       ++    + 
Sbjct: 125 YKDLPLNLYHIQWKFRDEVRPRF-GVMRSREFLMKDAYSFDLDYEGAKMAYYRMFVSYLR 183

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV---------------------- 451
            +   G + I ++  T P     S      AE     V                      
Sbjct: 184 TFARVGLQAIPMRADTGPIGGDLSHEFIILAETGESQVYCDRAYLDLAVPGADTDFRNDA 243

Query: 452 -LDTIKNSSQDRINTGVLLGEGAFYG-PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNA 508
            L  I             + + A +   K E  +     R  + G I            A
Sbjct: 244 QLTDIVTRWTTPYAATDEMHDEADWAKVKPESQVSA---RGIEVGHIFHFGTKYSEPMGA 300

Query: 509 FYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN----LPLWLSPIQAIVT---TI 560
                  ++    ++    +G    R +   IE    +     P  ++P  A +      
Sbjct: 301 KVQGPDGKEH---LVSMGSYGIGPSRLVAAAIEASHDDAGIIWPKAIAPFGAGIVNMKPG 357

Query: 561 TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
                  ++++   L +  +    D ++E    K     +  +P  +I G +  +   + 
Sbjct: 358 DEGCDGVSEKLYEALTNAGVDPLLDDKDERPGAKFATMDLIGLPTQVIVGPRGVAAGEVE 417

Query: 621 IRRFGSTTTQKVSLLDAIPILTKES 645
           ++       Q + +  AI +LT ++
Sbjct: 418 VKDRKMGERQSLGIEAAINMLTAQA 442


>gi|298291828|ref|YP_003693767.1| prolyl-tRNA synthetase [Starkeya novella DSM 506]
 gi|296928339|gb|ADH89148.1| prolyl-tRNA synthetase [Starkeya novella DSM 506]
          Length = 440

 Score =  203 bits (515), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 83/435 (19%), Positives = 147/435 (33%), Gaps = 42/435 (9%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           +E+E   HR + R   +    ++ +G+  W   G ++   + + +R +       EI  P
Sbjct: 16  KEAEIVSHRLMLRAGMIR---QESAGIYAWLPLGKRVLDKICNVVREEQNRSGAIEILMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW++SG +D Y   M  +K      +  R     P N      +    +KSY++
Sbjct: 73  TIQSADLWRESGRYDDYGKEMLRIKD-----RHERDMLFGPTNEEMLTEIVRAYVKSYKD 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYK 416
           LP+ L      +R+E      G+MR R F   DA+      E       ++    +  ++
Sbjct: 128 LPLNLYHIQWKFRDEVRPRF-GVMRSREFLMKDAYSVDLDFESAVVAYNRMFVAYLRTFE 186

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA--- 473
             G + I +   T P     S      A      V         D   + V   + A   
Sbjct: 187 RLGLKAIPMVADTGPIGGNHSHEFIILASTGESQVFCHSDYLGMDTPGSDVDFQDPAALQ 246

Query: 474 --------FYGPKFEYILKDA----------IGRDWQCGTIQV-DFNLPSRFNAFYVNSH 514
                    Y    E   + A            R  + G I           NA      
Sbjct: 247 TIVNRWTSLYAATEEKHDEAAFEAIPEGQRLSARGIEVGHIFYFGTKYSEPMNATVAGPD 306

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTT--ITSSAVEYA 568
                PV +     G   R    +IE          P  ++P +  +    +  +A + A
Sbjct: 307 GV-ERPVHMGSYGIG-PSRLAAAIIEASHDENGIIWPEAIAPFRVGLLNLKVGDAATDAA 364

Query: 569 QE-IANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGST 627
            E I   L S ++ +  D  +E    K     +  +P  II G K  +   + ++R    
Sbjct: 365 CEAIYAELASRNIDVLYDDTDERPGSKFATADLIGLPWQIIVGPKGLANGMVELKRRADG 424

Query: 628 TTQKVSLLDAIPILT 642
           T + + +  A+  +T
Sbjct: 425 TRETLPVAAALARIT 439


>gi|62289771|ref|YP_221564.1| prolyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941]
 gi|82699699|ref|YP_414273.1| prolyl-tRNA synthetase [Brucella melitensis biovar Abortus 2308]
 gi|189024014|ref|YP_001934782.1| prolyl-tRNA synthetase [Brucella abortus S19]
 gi|254697210|ref|ZP_05159038.1| prolyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260545481|ref|ZP_05821222.1| prolyl-tRNA synthetase [Brucella abortus NCTC 8038]
 gi|260761620|ref|ZP_05873963.1| prolyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
 gi|81309431|sp|Q57DT1|SYP_BRUAB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|114152174|sp|Q2YNE3|SYP_BRUA2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226699122|sp|B2S561|SYP_BRUA1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|62195903|gb|AAX74203.1| ProS, prolyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941]
 gi|82615800|emb|CAJ10798.1| tRNA synthetases, class-II (G, H, P and S):Prolyl-tRNA synthetase,
           class IIa:Anticodon binding domain:Prolyl-tRNA
           synthetase [Brucella melitensis biovar Abortus 2308]
 gi|189019586|gb|ACD72308.1| prolyl-tRNA synthetase [Brucella abortus S19]
 gi|260096888|gb|EEW80763.1| prolyl-tRNA synthetase [Brucella abortus NCTC 8038]
 gi|260672052|gb|EEX58873.1| prolyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
          Length = 442

 Score =  203 bits (515), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 76/445 (17%), Positives = 150/445 (33%), Gaps = 50/445 (11%)

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEI 294
              +E+E   HR + R   +    +  +G+  W   G K+   + + +R +       EI
Sbjct: 13  ENPKEAEIVSHRLMLRSGMIR---QQSAGIYSWLPIGLKVLNKVCTIIREEQNRAGANEI 69

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
             P +    LW++SG +D+Y   M  ++      +  R     P N      +F   ++S
Sbjct: 70  LMPTIQSADLWRESGRYDAYGKEMLRIQD-----RQKREMLFGPTNEEMVTDIFRSYVRS 124

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIIS 413
           Y++LP+ L      +R+E      G+MR R F   DA+ F    E       ++    + 
Sbjct: 125 YKDLPLNLYHIQWKFRDEVRPRF-GVMRSREFLMKDAYSFDLDYEGAKMAYYRMFVSYLR 183

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV---------------------- 451
            +   G + I ++  T P     S      AE     V                      
Sbjct: 184 TFARVGLQAIPMRADTGPIGGDLSHEFIILAETGESQVYCDRAYLDLAVPGADTDFRNDA 243

Query: 452 -LDTIKNSSQDRINTGVLLGEGAFYG-PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNA 508
            L  I             + + A +   K E  +     R  + G I            A
Sbjct: 244 QLTDIVTRWTTPYAATDEMHDEADWAKVKPESQVSA---RGIEVGHIFHFGTKYSEPMGA 300

Query: 509 FYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGNLPLWL---SPIQAIVT---TI 560
                  ++    ++    +G    R +   IE +      +W    +P  A +      
Sbjct: 301 KVQGPDGKEH---LVSMGSYGIGPSRLVAAAIEASHDDAGIIWPKTIAPFGAGIVNMKPG 357

Query: 561 TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
                  ++++   L +  +    D ++E    K     +  +P  +I G +  +   + 
Sbjct: 358 DEGCDGVSEKLYEALTNAGVDPLLDDKDERPGAKFATMDLIGLPTQVIVGPRGVAAGEVE 417

Query: 621 IRRFGSTTTQKVSLLDAIPILTKES 645
           ++   +   Q + +  AI +LT ++
Sbjct: 418 VKDRKTGERQSLGIKAAINMLTAQA 442


>gi|237815257|ref|ZP_04594255.1| prolyl-tRNA synthetase [Brucella abortus str. 2308 A]
 gi|237790094|gb|EEP64304.1| prolyl-tRNA synthetase [Brucella abortus str. 2308 A]
          Length = 445

 Score =  203 bits (515), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 76/445 (17%), Positives = 150/445 (33%), Gaps = 50/445 (11%)

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEI 294
              +E+E   HR + R   +    +  +G+  W   G K+   + + +R +       EI
Sbjct: 16  ENPKEAEIVSHRLMLRSGMIR---QQSAGIYSWLPIGLKVLNKVCTIIREEQNRAGANEI 72

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
             P +    LW++SG +D+Y   M  ++      +  R     P N      +F   ++S
Sbjct: 73  LMPTIQSADLWRESGRYDAYGKEMLRIQD-----RQKREMLFGPTNEEMVTDIFRSYVRS 127

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIIS 413
           Y++LP+ L      +R+E      G+MR R F   DA+ F    E       ++    + 
Sbjct: 128 YKDLPLNLYHIQWKFRDEVRPRF-GVMRSREFLMKDAYSFDLDYEGAKMAYYRMFVSYLR 186

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV---------------------- 451
            +   G + I ++  T P     S      AE     V                      
Sbjct: 187 TFARVGLQAIPMRADTGPIGGDLSHEFIILAETGESQVYCDRAYLDLAVPGADTDFRNDA 246

Query: 452 -LDTIKNSSQDRINTGVLLGEGAFYG-PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNA 508
            L  I             + + A +   K E  +     R  + G I            A
Sbjct: 247 QLTDIVTRWTTPYAATDEMHDEADWAKVKPESQVSA---RGIEVGHIFHFGTKYSEPMGA 303

Query: 509 FYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGNLPLWL---SPIQAIVT---TI 560
                  ++    ++    +G    R +   IE +      +W    +P  A +      
Sbjct: 304 KVQGPDGKEH---LVSMGSYGIGPSRLVAAAIEASHDDAGIIWPKTIAPFGAGIVNMKPG 360

Query: 561 TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
                  ++++   L +  +    D ++E    K     +  +P  +I G +  +   + 
Sbjct: 361 DEGCDGVSEKLYEALTNAGVDPLLDDKDERPGAKFATMDLIGLPTQVIVGPRGVAAGEVE 420

Query: 621 IRRFGSTTTQKVSLLDAIPILTKES 645
           ++   +   Q + +  AI +LT ++
Sbjct: 421 VKDRKTGERQSLGIKAAINMLTAQA 445


>gi|161618786|ref|YP_001592673.1| prolyl-tRNA synthetase [Brucella canis ATCC 23365]
 gi|254704135|ref|ZP_05165963.1| prolyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
 gi|260566616|ref|ZP_05837086.1| prolyl-tRNA synthetase [Brucella suis bv. 4 str. 40]
 gi|261754801|ref|ZP_05998510.1| prolyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
 gi|189083489|sp|A9MAJ9|SYP_BRUC2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|161335597|gb|ABX61902.1| prolyl-tRNA synthetase [Brucella canis ATCC 23365]
 gi|260156134|gb|EEW91214.1| prolyl-tRNA synthetase [Brucella suis bv. 4 str. 40]
 gi|261744554|gb|EEY32480.1| prolyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
          Length = 442

 Score =  203 bits (515), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 76/445 (17%), Positives = 149/445 (33%), Gaps = 50/445 (11%)

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEI 294
              +E+E   HR + R   +    +  +G+  W   G K+   + + +R +       EI
Sbjct: 13  ENPKEAEIVSHRLMLRSGMIR---QQSAGIYSWLPIGLKVLNKVCTIIREEQNRAGANEI 69

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
             P +    LW++SG +D+Y   M  ++      +  R     P N      +F   ++S
Sbjct: 70  LMPTIQSADLWRESGRYDAYGKEMLRIQD-----RQEREMLFGPTNEEMVTDIFRSYVRS 124

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIIS 413
           Y++LP+ L      +R+E      G+MR R F   DA+ F    E       ++    + 
Sbjct: 125 YKDLPLNLYHIQWKFRDEVRPRF-GVMRSREFLMKDAYSFDLDYEGAKMAYYRMFVSYLR 183

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV---------------------- 451
            +   G + I ++  T P     S      AE     V                      
Sbjct: 184 TFARVGLQAIPMRADTGPIGGDLSHEFIILAETGESQVYCDRAYLDLAVPGADTDFRNDA 243

Query: 452 -LDTIKNSSQDRINTGVLLGEGAFYG-PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNA 508
            L  I             + + A +   K E  +     R  + G I            A
Sbjct: 244 QLTDIVTRWTTPYAATDEMHDEADWAKVKPESQVSA---RGIEVGHIFHFGTKYSEPMGA 300

Query: 509 FYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN----LPLWLSPIQAIVT---TI 560
                  ++    ++    +G    R +   IE    +     P  ++P  A +      
Sbjct: 301 KVQGPDGKEH---LVSMGSYGIGPSRLVAAAIEASHDDAGIIWPKAIAPFGAGIVNMKPG 357

Query: 561 TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
                  ++++   L +  +    D ++E    K     +  +P  +I G +  +   + 
Sbjct: 358 DEGCDGVSEKLYEALTNAGVDPLLDDKDERPGAKFATMDLIGLPTQVIVGPRGVAAGEVE 417

Query: 621 IRRFGSTTTQKVSLLDAIPILTKES 645
           ++       Q + +  AI +LT ++
Sbjct: 418 VKDRKMGERQSLGIEAAINMLTAQA 442


>gi|163868357|ref|YP_001609566.1| prolyl-tRNA synthetase [Bartonella tribocorum CIP 105476]
 gi|189083488|sp|A9IUL1|SYP_BART1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|161018013|emb|CAK01571.1| Prolyl-tRNA synthetase [Bartonella tribocorum CIP 105476]
          Length = 441

 Score =  202 bits (514), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 80/448 (17%), Positives = 150/448 (33%), Gaps = 44/448 (9%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  L       +E+E   HR + R   +    +  SG+  W   G K+   +   +R +
Sbjct: 4   SQYFLPLLKENPKEAEIVSHRFMLRAGMIR---QQTSGIYSWLPLGKKVLDKVCKIIREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +     EI  P +    LW++SG +D Y   M  +K      +  R     P N     
Sbjct: 61  QERAGAIEILMPTIQSADLWRESGRYDDYGLEMLRIKD-----RQKRDLLYGPTNEEMVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +F   ++SY++LP+ L      +R+E      G+MR R F   DA+ F    E      
Sbjct: 116 DIFRSYVRSYKDLPLNLYHIQWKFRDEIRPRF-GVMRAREFLMKDAYSFDLDYEGSKTSY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            ++    +  +   G + I ++  T P     S      AE     +    +       N
Sbjct: 175 NRMFVAYLRTFSRLGLKAIPMRADTGPIGGKLSHEFIILAETGESAIFCDKQFLELSVPN 234

Query: 465 TGVLLGEGA-----------FYGPKFEYILKDAIGR----------DWQCGTI-QVDFNL 502
           + +   + A           FY    E   ++   R            + G I       
Sbjct: 235 SSIDFSDKAVLDDTVKQWTSFYAATEEMHNEEEWARLSEENRLSARGIEVGHIFHFGTKY 294

Query: 503 PSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGNLPLW---LSPIQAIV 557
            +   A  +    ++    ++    +G    R +   IE +      +W   ++P    +
Sbjct: 295 SAPMEAKVMGQDGKEH---VVSMGSYGIGPSRLVAAAIEASHDEKGIIWPKSMAPFDFGI 351

Query: 558 T---TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
                      +  + +   LK        D RNE    K     +  +P  II G    
Sbjct: 352 INMKPDDEKCTQACEFLYQGLKDAGFDPFLDDRNERPGSKFATMDLIGLPTQIIVGPNSI 411

Query: 615 SERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +   + I+   +   + + + D +  L+
Sbjct: 412 AHNEVEIKDRKTGAKKSLKVEDVLSQLS 439


>gi|302383072|ref|YP_003818895.1| prolyl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264]
 gi|302193700|gb|ADL01272.1| prolyl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264]
          Length = 437

 Score =  202 bits (514), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 78/443 (17%), Positives = 154/443 (34%), Gaps = 37/443 (8%)

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLF--HIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
             L++Y     +    D + ++ ++ L    I ++ +G+  W   G ++   +   +R +
Sbjct: 1   MRLSRYFLPTLKEAPSDAQIVSHQLMLRAGMIKQEAAGIYAWLPLGLRVLNRIEQIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +     E+  P +    LW++SG +D+Y   M  +     T +  R     P N     
Sbjct: 61  QERAGAVELLMPTLQLADLWRESGRYDAYGPEMLRI-----TDRHERELLYGPTNEEMIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +F   +KSY+ LP+ L      +R+E      G+MR R F   DA+ F   E       
Sbjct: 116 DIFRGFVKSYKALPLNLFHIQWKFRDERRPRF-GVMRGREFLMKDAYSFDIDEASARRAY 174

Query: 406 -KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV-----LDTIKNSS 459
            ++    ++ +   G + + ++  T P     S      A+     V     L  +    
Sbjct: 175 NRMFVAYLNTFARMGLKAVPMRADTGPIGGDLSHEFIVLADTGESQVFCDKQLVEMPAPG 234

Query: 460 QDRINT----GVLLGEGAFYGPKFEYIL------KDAIGRDWQCGTI---QVDFNLPSRF 506
            D ++      ++ G  + Y    E         + A G       I    + +      
Sbjct: 235 AD-VDWNDLQAIVDGRTSLYAATEEMHDAAQFESQTADGDRLTARGIEVGHIFYFGTKYS 293

Query: 507 NAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN----LPLWLSPIQAIVTT-- 559
                           +H   +G  + R +G +IE    +     P  ++P   +V    
Sbjct: 294 APMKAKVAGPDGQDTEVHMGSYGVGVSRLLGAIIEASHDDAGIIWPDAVAPFDVVVINLR 353

Query: 560 -ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERS 618
                  E  +     L++   S+  D  +E    K     +  IP  +  G K  +E  
Sbjct: 354 ANDPGVCEACEAAVEALEAAGKSVLYDDTDERPGGKFATADLIGIPWQLTIGPKGVAEGV 413

Query: 619 IGIRRFGSTTTQKVSLLDAIPIL 641
           + ++R  S     + L  A+  +
Sbjct: 414 VELKRRASGEKSTLPLDQAMERI 436


>gi|188580267|ref|YP_001923712.1| prolyl-tRNA synthetase [Methylobacterium populi BJ001]
 gi|226701310|sp|B1ZA28|SYP_METPB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|179343765|gb|ACB79177.1| prolyl-tRNA synthetase [Methylobacterium populi BJ001]
          Length = 441

 Score =  202 bits (514), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 78/436 (17%), Positives = 143/436 (32%), Gaps = 42/436 (9%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTP 297
           +E+E   HR + R   +    ++ +G+  W   G ++   +   +R  + +    EI  P
Sbjct: 16  KEAEIVSHRLMLRAGMIR---QEAAGIYAWLPLGLRVLNKVCDVIRAEQDRAGAVEILMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW++SG +++Y   M  +K      +  R     P        +F    +SY++
Sbjct: 73  TIQAADLWRESGRYEAYGKEMLRLKD-----RHERELLYGPTAEEVVTEIFRASARSYKD 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYK 416
           LP  L +    +R+E      G MR R F   D + F   +        K+    +  ++
Sbjct: 128 LPKNLYQISWKFRDEVRPRF-GTMRSREFLMKDGYSFDLDQAAARHSYNKVFVSYLRTFE 186

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA--- 473
             G   I ++  T P     S      A+     V               V   + A   
Sbjct: 187 TLGLRAIPMRADTGPIGGDLSHEFIILAKTGESEVFCDRAYLDMPVPPPSVDFDDVAGLQ 246

Query: 474 --------FYGPKFEYILKDA----------IGRDWQCGTIQV-DFNLPSRFNAFYVNSH 514
                    Y    E   +              R  + G I        +   A      
Sbjct: 247 GVVDSWTSHYAATDEMHDEAVFAEVPEASRLSARGIEVGHIFYFGTKYSTPMKAVVTGPD 306

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTITSSAVEYAQ- 569
            +   PV +     G   R +   IE          P  ++P    +  +          
Sbjct: 307 GQ-ERPVHMGSYGIG-PSRLVAATIEASHDEAGIIWPDAIAPFDVALINLKVGDAACDAA 364

Query: 570 --EIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGST 627
             EI + L++  LS+  D R+E    K     +  +P  +I G K  +E  I ++R  S 
Sbjct: 365 CAEIQSALETAGLSVLYDDRDERPGAKFATADLIGLPWQVIVGPKGLAEGKIELKRRASG 424

Query: 628 TTQKVSLLDAIPILTK 643
             + +  +D    + +
Sbjct: 425 ERETLDPVDLPARIRR 440


>gi|91772258|ref|YP_564950.1| prolyl-tRNA synthetase [Methanococcoides burtonii DSM 6242]
 gi|121689406|sp|Q12ZC6|SYP_METBU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|91711273|gb|ABE51200.1| Prolyl-tRNA synthetase [Methanococcoides burtonii DSM 6242]
          Length = 478

 Score =  202 bits (513), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 69/409 (16%), Positives = 156/409 (38%), Gaps = 56/409 (13%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQ 298
           +E+    +  + +  ++  +     G   W+  G+ I + +   +R  +  D++E   P 
Sbjct: 13  KENFSEWYNGMLQIAEIMDVRYPVKGSYVWYPFGFSIRRNVYDIIRGLLDKDHQETLFPL 72

Query: 299 VLDQ-HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           ++ +    +++ H   +   ++ V     T  D++  AL+P +      ++   ++S+ +
Sbjct: 73  LIPENEFMKEAEHIKGFEEEVYWVLNGGTTPLDVK-LALRPTSETAIYPMYRLWVRSHAD 131

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFT-QDDAHVFC-TKEQMFNECLKIHNLIISIY 415
           LP++L +  + +R E       L+R+R  T   +AH    T ++  ++  +   L I  Y
Sbjct: 132 LPLKLYQIVNTFRYETK-HTRPLIRLREITSFKEAHTVHATWDEAASQVEEAIRLYIEFY 190

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           K      +  K  +           WD                             GA Y
Sbjct: 191 KRLAIPVLPSKRPS-----------WDKF--------------------------PGADY 213

Query: 476 GPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
               + ++ D  G+  Q GT   +  N    F+  Y +   E+   V  H+  +G  ER 
Sbjct: 214 TIAVDSLMPD--GKTLQVGTAHHLGDNFAKTFDIKYEDVDGEQ---VYAHQTCYGVSERC 268

Query: 535 IGIMIENFKGNLPLWL----SPIQAIVTTIT----SSAVEYAQEIANLLKSHHLSIETDF 586
           I  ++     +  L L    +P Q ++  I      + +    ++   L++  + +  D 
Sbjct: 269 IATLLSTHGDDKGLVLPPEVAPTQVVIIPIIFKEPEAVLNACNDVKAELEAAGVRVTIDD 328

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
            ++    K  +  +K +P+ I  G ++    +  + R  +   ++V L 
Sbjct: 329 SDKRPGSKYYKWEMKGVPLRIEIGPRDLKNEAAMLARRDTGEKEQVPLA 377


>gi|49475642|ref|YP_033683.1| prolyl-tRNA synthetase [Bartonella henselae str. Houston-1]
 gi|81827712|sp|Q6G3A4|SYP_BARHE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|49238449|emb|CAF27677.1| Prolyl-tRNA synthetase [Bartonella henselae str. Houston-1]
          Length = 441

 Score =  202 bits (513), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 77/448 (17%), Positives = 150/448 (33%), Gaps = 44/448 (9%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  L       +E+E   HR + R   +    +  SG+  W   G K+   +   +R +
Sbjct: 4   SQYFLPLLKENPKEAEIISHRLMLRAGMIR---QQTSGIYSWLPLGKKVLDKICKIIREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +     EI  P +    LW++S  +D Y   M  +K      +  R     P N     
Sbjct: 61  QERAGAIEILMPTIQSADLWRESDRYDDYGLEMLRIKD-----RQKRDLLYGPTNEEMVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +F   ++SY++LP+ L      +R+E      G+MR R F   DA+ F    E      
Sbjct: 116 DIFRSYIRSYKDLPLNLYHIQWKFRDEIRPRF-GVMRSREFLMKDAYSFDLDYEGSKISY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            ++    +  +   G + I ++  T P     S      AE     +            +
Sbjct: 175 NRMFVAYLRTFSCLGLKAIPMRADTGPIGGKLSHEFIILAETGESAIFCDKHFLELTVPD 234

Query: 465 TGVLLGEGA-----------FYGPKFEYILKDAIG----------RDWQCGTI-QVDFNL 502
           + +   + A           FY    E   ++             R  + G I       
Sbjct: 235 SSIDFSDKAILANIVKQWTSFYAATEEMHDEEEWAKISDNNRLSARGIEVGHIFHFGTKY 294

Query: 503 PSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGNLPLWL---SPIQAIV 557
            +   A  +    ++    ++    +G    R +  +IE +   N  +W    +P    +
Sbjct: 295 SAPMGAKVMGQDGKEH---LVSMGSYGIGPSRLVAAVIEASHDENGIIWPKSIAPFDFGI 351

Query: 558 T---TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
                         + +   L+        D RNE    K     +  +P  II G K  
Sbjct: 352 INMKPDDEKCTHACETLYKGLRYAGFDPLLDDRNERPGSKFATMDLIGLPTQIIVGPKSV 411

Query: 615 SERSIGIRRFGSTTTQKVSLLDAIPILT 642
           ++  + I+   +   + +++ + +   +
Sbjct: 412 AQNEVEIKDRKTGIKKSLTVENVLNQFS 439


>gi|58038568|ref|YP_190532.1| prolyl-tRNA synthetase [Gluconobacter oxydans 621H]
 gi|81819190|sp|Q5FUU9|SYP_GLUOX RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|58000982|gb|AAW59876.1| Prolyl-tRNA synthetase [Gluconobacter oxydans 621H]
          Length = 438

 Score =  202 bits (513), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 84/444 (18%), Positives = 154/444 (34%), Gaps = 41/444 (9%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           T+           E++   HR + R   +   A   SG+  W   G ++ + +   +R +
Sbjct: 4   TKAFQPTLKEVPAEAQIASHRLMLRAGLVRQTA---SGIYAWLPAGLRVLRNIEQIIREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
                 +E+  P +    LW++SG +D+Y   M  ++      +  R     P N     
Sbjct: 61  QDAIGAQEVLMPTLQSAELWRRSGRYDAYGPEMLRIQD-----RHGRDLLYGPTNEEMIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +F   +KSY+ELP  L      +R+E      G+MR R F   DA+ F    E      
Sbjct: 116 DIFGSSVKSYKELPKALYHIQWKFRDEVRPRF-GVMRGREFLMKDAYSFDASYEGAVASY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            ++    + I++  G   + +   T P     S      A      V        QD ++
Sbjct: 175 RRMMLSYLRIFQRLGVRAVPMVADTGPIGGDLSHEFLVLAPTGESAVFFDAALEEQDWLS 234

Query: 465 TGVLLGEGA-----------FYGPKFEYILKDAI----------GRDWQCGTIQVDFNLP 503
             V   +              Y    E   +             GR  + G I       
Sbjct: 235 RPVDCDDAESLATFFATVTDHYAATDEKHDEAEWAKVPAERKREGRGIEVGHIFYFGTKY 294

Query: 504 SRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN----LPLWLSPIQAIVT 558
           +      V+       P   H   +G  + R +G +IE    +     P  ++P +A + 
Sbjct: 295 TASMGIEVS--GPDGAPFHPHMGSYGVGVSRLVGAIIEASHDDAGIIWPASVAPYRAAIL 352

Query: 559 TITSSAVEYAQEIANLLKSHHLS-IETDFRNETINYKIREHSIKKIPIIIICGDKEASER 617
            +     E    I + +       +  D R+E    K  +  +   P  II G + A E 
Sbjct: 353 NLRQD-DEACDAICDRIYGTDPENLLYDDRSERAGVKFNDADLMGHPWQIIVGPRGAKEG 411

Query: 618 SIGIRRFGSTTTQKVSLLDAIPIL 641
            + +++  +    ++S+ DA+  +
Sbjct: 412 KVELKQRATGERFELSVEDALAKI 435


>gi|289472546|gb|ADC97458.1| putative threonyl-tRNA synthetase [Amblyomma americanum]
          Length = 209

 Score =  202 bits (513), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 66/206 (32%), Positives = 98/206 (47%), Gaps = 6/206 (2%)

Query: 3   SDIKLTFPDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIE 60
           + I +T PDG          T   +A  IS+ LA   V   +N  + DL  P+  + ++E
Sbjct: 7   APITVTLPDGKQVPAESWKTTPYQIAAGISKGLADNVVIAKVNKVLWDLDRPLEEDCTLE 66

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDEL 119
           ++  ED     V  HS AH++ EA++ ++    +  GP IE GFYYD   +Q   S+ + 
Sbjct: 67  LLKFEDKEGEQVFWHSSAHVLGEALERLYGGC-LCYGPPIEGGFYYDMHVDQGGVSAVDH 125

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             IE  M+ I+    PF +  L  E    +   +   +KV IL+        T+YR G  
Sbjct: 126 PSIEGLMRNIVKERQPFERLELPKEDLLRM--FQYNPFKVRILQEKVQTPTTTVYRCGPL 183

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAG 205
            DLCRGPHVR TG+VK        + 
Sbjct: 184 IDLCRGPHVRHTGKVKALHVTKNSSA 209


>gi|304391639|ref|ZP_07373581.1| prolyl-tRNA synthetase [Ahrensia sp. R2A130]
 gi|303295868|gb|EFL90226.1| prolyl-tRNA synthetase [Ahrensia sp. R2A130]
          Length = 451

 Score =  202 bits (513), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 83/447 (18%), Positives = 152/447 (34%), Gaps = 42/447 (9%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           TQ  L        E+E   H+ + R      I +  +G+  W   G K+ + +   +R +
Sbjct: 4   TQYFLPVLKEAPREAEIASHQLMLRAGM---IKQQSAGIYSWLPLGLKVLRKVEQIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
                  E+  P +    LW++SG +D Y   M  ++      +  R     P N     
Sbjct: 61  QNRAGAVEVLMPTIQSADLWRESGRYDDYGKEMLRIQD-----RHERDMLFGPTNEEMIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT-KEQMFNEC 404
            +F   +KSY++LP+ L      +R+E      G+MR R F   DA+ F    +      
Sbjct: 116 DIFRTYVKSYKDLPLNLYHIQWKFRDEVRPRF-GVMRGREFLMKDAYSFDLNADAARAAY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPE-----------KRVGSDALWDDAENIMKGVLD 453
            ++    +  +   G + I ++  T P               G   ++  ++   K V D
Sbjct: 175 YRMFVSYLRTFDRLGVKAIPMRADTGPIGGDLSHEFLILADTGESEVFCHSDFSKKTVPD 234

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIG----------RDWQCGTIQ-VDFNL 502
              + S D +  G++    + Y    E   +              R  + G I       
Sbjct: 235 AGVDYSDDALIAGIVDDWTSGYARTDEMHDEALWAEVPEDEQLNARGIEVGHIFNFGSKY 294

Query: 503 PSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNLPLWL---SPIQAIVT 558
                A        K  PV +     G   R +  ++E     N  +W    +P    + 
Sbjct: 295 SEPMGAKVTGPDG-KDVPVEMGSYGIG-PSRVVAALVEAGHDENGIIWPDSVAPFDVGLI 352

Query: 559 TI--TSSAVEYA-QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEAS 615
            +       + A  ++   L +  L +  D  +     K     +  +P  +I G +   
Sbjct: 353 NLRSGDEVTDAACDDMYAQLSAAGLDVLYDDTDGRAGGKFALADLIGLPWQLIVGPRGLK 412

Query: 616 ERSIGIRRFGSTTTQKVSLLDAIPILT 642
              + ++   S     VS+  AI  LT
Sbjct: 413 TGEVELKARASGERHTVSIDAAINQLT 439


>gi|328543706|ref|YP_004303815.1| Prolyl-tRNA synthetase [polymorphum gilvum SL003B-26A1]
 gi|326413449|gb|ADZ70512.1| Prolyl-tRNA synthetase [Polymorphum gilvum SL003B-26A1]
          Length = 442

 Score =  201 bits (512), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 73/435 (16%), Positives = 154/435 (35%), Gaps = 42/435 (9%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
           +E+E   HR + R   +    +  +G+  W   G+++ + +   +  +  +    ++  P
Sbjct: 16  KEAEIVSHRLMLRAGMIR---QQSAGIYSWLPLGFRVLRKIEKIVEEEQARAGAVQLLMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW++SG +D+Y   M  +     T +  R     P N      +F   ++SY++
Sbjct: 73  TIQPADLWRESGRYDAYGKEMLRI-----TDRHEREMLYGPTNEEMITEIFRSYVRSYKD 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYK 416
           LP+ L      +R+E      G+MR R F   DA+ F    E   +   ++    +  + 
Sbjct: 128 LPLNLYHIQWKFRDEVRPRF-GIMRGREFLMKDAYSFDIDKEAARHAYNRMFVAYLRTFA 186

Query: 417 DFGFEKIMVKLSTRPEKRVGSDAL------WDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
             G + I ++  T P     S          + A    + +LD           + +   
Sbjct: 187 RMGLKAIPMRADTGPIGGDMSHEFIILASTGESAVFCDRSLLDLPTPGEDTDFLSDLSPI 246

Query: 471 EGAF---YGPKFEYILKD----------AIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSE 516
             A+   Y    E   +              R  + G I            A  + +   
Sbjct: 247 VEAWTTPYAATDEMHDETTFAALPEAERVSARGIEVGHIFYFGTKYSEPMGARVMTAEGT 306

Query: 517 KCHPVMIHRAVFGS-IERFIGIMIE-NFKGNLPLWL---SPIQAIVTTITSSAVEY---A 568
           +   V +H   +G  + R +G +IE N   +  +W    +P    +  +     +     
Sbjct: 307 E---VPVHMGSYGVGVSRLLGALIEANHDDDGIIWPASVAPFHVGLINLKPGDADTDSAC 363

Query: 569 QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
             +   L++  + +  D  +     K     +  +P  II G +   +  + ++   S  
Sbjct: 364 AGLYARLEAVGVEVLYDDVDTRAGAKFATMDLIGLPFQIIAGPRGLKDGVVEVKERASGQ 423

Query: 629 TQKVSLLDAIPILTK 643
            + +SL  A   + +
Sbjct: 424 RESLSLEAAFNRVRE 438


>gi|157803870|ref|YP_001492419.1| prolyl-tRNA synthetase [Rickettsia canadensis str. McKiel]
 gi|166980151|sp|A8EZ51|SYP_RICCK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|157785133|gb|ABV73634.1| prolyl-tRNA synthetase [Rickettsia canadensis str. McKiel]
          Length = 438

 Score =  201 bits (512), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 85/427 (19%), Positives = 157/427 (36%), Gaps = 30/427 (7%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  L        E++   H+ + R   +    +  +G+  W   G KI + + + +R  
Sbjct: 4   SKYFLPVLKEEPSEAQITSHKLMLRSGMIR---QQAAGIYTWLPLGLKILKNIENIVRSN 60

Query: 287 IK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P +   HLW +SG +++Y   M   +   D           P N     
Sbjct: 61  MNKAGALEVLMPCIQPAHLWMESGRFENYGKEMLKFQDRHDNT-----LLFGPTNEDMIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +F H +KSY++LP  L      +R+E      G+MR R F   DA+ F   E+   +  
Sbjct: 116 DIFRHNIKSYKDLPKNLYHIQWKFRDEIRPRF-GVMRGREFLMKDAYSFDINEENAVKTY 174

Query: 406 -KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            ++    I+ ++D G   I V     P     S+     AE   +  L   K     + N
Sbjct: 175 NQMFKTYINTFRDLGVFAIPVIADNGPIGGNLSNEFHIIAETG-ESTLYYDKRFKIFKDN 233

Query: 465 TGVLLGE-GAFYGPKFEYILKDAI---------GRDWQCGTIQVDFNLPSRFNAFYVNSH 514
             + + E  ++Y    E    + +          +  + G I    +  S      +N  
Sbjct: 234 PDIDVEEIKSWYAASEEKHDVNKLPISEQEITSSKGIEVGHIFYIGSKYSVNMNALINDE 293

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNLPLWL---SPIQAIVTTIT---SSAVEY 567
             K  PV +     G I R +  +IE N      +W    +P +  +  +    S   E 
Sbjct: 294 HGKLTPVEMSSYGIG-ISRLVAAIIEANCDEKGIIWPSSVAPFKVSLINLNIHDSKCTEL 352

Query: 568 AQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGST 627
           A+     L + ++ +  D  +     K   H +   P  II G K+A+   +  +   S 
Sbjct: 353 AERAYKELSAQNIEVLYDDTDVRPGSKFATHDLIGSPYQIIIGPKKAANNIVEFKNRKSG 412

Query: 628 TTQKVSL 634
             + + +
Sbjct: 413 VIEDIKI 419


>gi|240850599|ref|YP_002971999.1| prolyl-tRNA synthetase [Bartonella grahamii as4aup]
 gi|240267722|gb|ACS51310.1| prolyl-tRNA synthetase [Bartonella grahamii as4aup]
          Length = 441

 Score =  201 bits (511), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 81/448 (18%), Positives = 153/448 (34%), Gaps = 44/448 (9%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  L       +E+E   HR + R   +    +  SG+  W   G K+   +   +R +
Sbjct: 4   SQYFLPLLKENPKEAEIVSHRLMLRAGMIR---QQTSGIYSWLPLGKKVLDKVCRIIREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +     EI  P +    LW++SG +D Y   M  +K      +  R     P N     
Sbjct: 61  QERAGAIEILMPTIQSADLWRESGRYDDYGLEMLRIKD-----RQKRDLLYGPTNEEMVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +F   ++SY++LP+ L      +R+E      G+MR R F   DA+ F    E      
Sbjct: 116 DIFRSYVRSYKDLPLNLYHIQWKFRDEIRPRF-GVMRAREFLMKDAYSFDLDYEGSKTSY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            ++    +  +   G + I ++  T P     S      AE     +    +       +
Sbjct: 175 NRMFVAYLRTFSRLGLKAIPMRADTGPIGGELSHEFIILAETGESAIFCNKQFLELTVPD 234

Query: 465 TGVLLGEGA-----------FYGPKFEYI-------LKDAIG---RDWQCGTI-QVDFNL 502
           + +   + A           FY    E         + D      R  + G I       
Sbjct: 235 SSIDFSDKAVLDDIVKQWTSFYAATEEMHNEEEWAKVSDHNRLSARGIEVGHIFHFGTKY 294

Query: 503 PSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGNLPLW---LSPIQAIV 557
            +   A  +    ++    ++    +G    R +   IE +   N  +W   ++P    +
Sbjct: 295 SAPMEAKVMGQDGKEH---VVSMGSYGIGPSRLVAAAIEASHDENGIIWPKSMAPFDFGI 351

Query: 558 TTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
             +        +  + +   LK        D RNE    K     +  +P  II G    
Sbjct: 352 INMKSDDEKCTKACEFLYQGLKEAGFDPLLDDRNERPGSKFATMDLIGLPTQIIVGPNSI 411

Query: 615 SERSIGIRRFGSTTTQKVSLLDAIPILT 642
           ++  + I+   +   + + + D +  L+
Sbjct: 412 AQNEVEIKDRKTGVKKSLKVEDVLSQLS 439


>gi|289472548|gb|ADC97459.1| putative threonyl-tRNA synthetase [Amblyomma cajennense]
          Length = 209

 Score =  201 bits (511), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 65/207 (31%), Positives = 97/207 (46%), Gaps = 6/207 (2%)

Query: 2   PSDIKLTFPDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
            + I +T PDG          T   +A  IS+ LA   V   +N  + DL  P+  + ++
Sbjct: 6   SAPITVTLPDGKQVPAESWKTTPYQIAAGISKGLADNVVIAKVNKVLWDLDRPLEEDCTL 65

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDE 118
           E++  ED     V  HS AH++ EA++ ++    +  GP IE GFYYD   +Q   S+ +
Sbjct: 66  ELLKFEDKEGEQVFWHSSAHVLGEALERLYGGC-LCYGPPIEGGFYYDMHVDQGGVSAVD 124

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
              IE  M+ I+    PF +  L  E    +   +   +KV IL+        T+Y  G 
Sbjct: 125 HPSIEGLMRNIVKERQPFERLELPKEDLLRM--FQYNPFKVRILQEKVQTPTTTVYGCGP 182

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAG 205
             DLCRGPHVR TG+VK        + 
Sbjct: 183 LIDLCRGPHVRHTGKVKALHVTKNSSA 209


>gi|89070126|ref|ZP_01157455.1| prolyl-tRNA synthetase [Oceanicola granulosus HTCC2516]
 gi|89044243|gb|EAR50389.1| prolyl-tRNA synthetase [Oceanicola granulosus HTCC2516]
          Length = 466

 Score =  201 bits (511), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 74/428 (17%), Positives = 152/428 (35%), Gaps = 38/428 (8%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
            HR + R      I + G+G+  W   G+++ + +   +  + +   +  +  P +    
Sbjct: 22  SHRLMLRAGM---IKQAGAGIYSWLPLGYRVLKKIERIVHEEQQRAGHHPVLMPTLQTAE 78

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SG +D+Y   M  ++   D     R     P N      +F   + SY++LP+ L 
Sbjct: 79  LWRESGRYDAYGPEMLRIRDRHD-----RDMLYGPTNEEMITDIFRSHVASYKDLPLTLY 133

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKDFGFEK 422
                +R+E      G+MR R F   D + F  TKE   +   +     +  Y+  G + 
Sbjct: 134 HIQWKFRDEVRPRF-GVMRGREFLMKDGYNFDLTKEDALHAYNRHLVSYLRTYERMGLQA 192

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF-------- 474
           I ++  + P     +      AE     V    + +        +   + A         
Sbjct: 193 IPMRADSGPIGGDDTHEFLVLAETGESEVFYDSEITDLRFGEREIDYDDRAQCEAVMAEF 252

Query: 475 ---YGPKFEYI-------LKDAIGRDWQCGTIQVDFNLPSRFNA-FYVNSHSEKCHPVMI 523
              Y    E         + +A  R  +   +   F   ++++             PV +
Sbjct: 253 TSRYARTDETHDEALFAEVPEARRRSARGIEVGQIFYFGTKYSEPMGATVQGPDGKPVPV 312

Query: 524 HRAVFGS-IERFIGIMIE-NFKGNLPLWL---SPIQAIVTTITS---SAVEYAQEIANLL 575
           H    G  + R +G +IE N      +W    +P    +  + +    A    Q+I + L
Sbjct: 313 HMGSHGIGVSRLVGALIEANHDDKGIVWPEGVTPFHVGLVNLKTGDGDADAACQKIYDQL 372

Query: 576 KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
            +  L +  D R+E    K     +  +P  +  G +      + +    +  +++++  
Sbjct: 373 TACGLEVLYDDRDERAGAKFATMDLIGLPWRVTVGPRGLKNGVVELTSRRTGDSEEIAPD 432

Query: 636 DAIPILTK 643
                L +
Sbjct: 433 ALTDRLCE 440


>gi|21226809|ref|NP_632731.1| prolyl-tRNA synthetase [Methanosarcina mazei Go1]
 gi|74580278|sp|Q8PYZ1|SYP_METMA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|20905107|gb|AAM30403.1| Prolyl-tRNA synthetase [Methanosarcina mazei Go1]
          Length = 480

 Score =  201 bits (510), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 67/409 (16%), Positives = 151/409 (36%), Gaps = 60/409 (14%)

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
              + +L    ++  +     G+  W+  G+ I +   S +R  + +  ++E   P ++ 
Sbjct: 17  SDWYNELLWMAEIMDVRYPVKGLYVWYPFGFAIRRNTYSIIREILDNSGHQETLFPLLIP 76

Query: 302 Q-HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +    +++ H   +   ++ V        D+   AL+P +      ++   ++S+ + P+
Sbjct: 77  ENEFMKEAEHIKGFENEVYWVTHGGKDPLDI-PLALRPTSETAIYPMYKKWVRSHADFPL 135

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFT-QDDAHVFC-TKEQMFNECLKIHNLIISIYKDF 418
           +L +  + +R E       L+R+R  T   +AH    T E    +  +   L   IY+  
Sbjct: 136 KLYQIVNTFRYETK-HTRPLIRLREITSFKEAHTVHATWEDAEAQVKEAIGLYTEIYRRL 194

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
               +  +              WD                             GA Y   
Sbjct: 195 AVPVLRSRRPD-----------WDKF--------------------------PGADYTDA 217

Query: 479 FEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
            + ++ D  G+  Q GT+  +  N    F+  Y     E+ +    H+  +G  ER I  
Sbjct: 218 LDAVMPD--GKTLQIGTVHHLGDNFAKTFDIKYEAPDGEQRYA---HQTCYGISERSIAA 272

Query: 538 MI----ENFKGNLPLWLSPIQAIVTTIT-----SSAVEYAQEIANLLKSHHLSIETDFRN 588
            I    ++    LP  ++P+Q ++  I             +++   LK   + +E D  +
Sbjct: 273 TISIHGDDKGLVLPPEIAPVQVVIIPIIFKKGAEEVFAACKDVQERLKKAGIRVEVDASD 332

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASER-SIGIRRFGSTTTQKVSLLD 636
                K  +  +K +P+ +  G ++     ++ +R   +    +++LL+
Sbjct: 333 LRPGAKYYKWEMKGVPLRLEIGPRDLQNNVAVAVR-RDTGEKDQITLLE 380


>gi|118590019|ref|ZP_01547423.1| prolyl-tRNA synthetase [Stappia aggregata IAM 12614]
 gi|118437516|gb|EAV44153.1| prolyl-tRNA synthetase [Stappia aggregata IAM 12614]
          Length = 442

 Score =  201 bits (510), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 75/433 (17%), Positives = 153/433 (35%), Gaps = 40/433 (9%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
           +E+E   HR + R   +    +  +G+  W   G K+ + +   +  +  +    ++  P
Sbjct: 16  KEAEIVSHRLMLRAGMIR---QQSAGIYSWLPLGLKVLRKIERIVEEEQARAGAIQLLMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW++SG +D+Y   M  +     T +  R     P N      +F   ++SY++
Sbjct: 73  TIQSADLWRESGRYDAYGKEMLRI-----TDRHERDMLFGPTNEEMITDIFRGYVRSYKD 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYK 416
           LP+ L      +R+E      G+MR R F   DA+ F    E   +   ++    +  + 
Sbjct: 128 LPLNLYHIQWKFRDEVRPRF-GVMRGREFLMKDAYSFDLDKESARHAYNRMFVAYLRTFA 186

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV-----LDTIKNSSQDRINT----GV 467
             G + I +K  T P     S      AE     V     L  +   ++D         +
Sbjct: 187 RMGLKAIPMKADTGPIGGDMSHEFIILAETGESEVFCDKSLLELPTPAEDTDFFSDLTPI 246

Query: 468 LLGEGAFYGPKFEYILKDAIG----------RDWQCGTIQVDFNLPSRFNAFYVNSHSEK 517
           +      Y    E   + A G          R  + G I          +A      + +
Sbjct: 247 VTEWTTPYAATDEMHDEAAFGALPEDTRVSARGIEVGHIFYFG--TKYSDAMGAKVATAE 304

Query: 518 CHPVMIHRAVFGS-IERFIGIMIE-NFKGNLPLWL---SPIQAIVT---TITSSAVEYAQ 569
              V +H   +G  + R +G +IE N   N  +W    +P    +              +
Sbjct: 305 GTEVPVHMGSYGVGVSRLLGALIEANHDENGIVWPKSVAPFHVGLVNLKPGDELTDPVCE 364

Query: 570 EIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           ++    ++  + +  D  +     K     +  +P  ++ G +   +  + ++   +   
Sbjct: 365 DLYAKFEAAGIEVLYDDTDTRAGAKFATMDLIGLPFQVVAGPRGLKDGLLEVKDRATGEK 424

Query: 630 QKVSLLDAIPILT 642
           + +S    +  LT
Sbjct: 425 EMLSPEATLNKLT 437


>gi|67458992|ref|YP_246616.1| prolyl-tRNA synthetase [Rickettsia felis URRWXCal2]
 gi|75536572|sp|Q4ULX2|SYP_RICFE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|67004525|gb|AAY61451.1| Prolyl-tRNA synthetase [Rickettsia felis URRWXCal2]
          Length = 427

 Score =  201 bits (510), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 85/434 (19%), Positives = 158/434 (36%), Gaps = 28/434 (6%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  L        E++   H+ + R   +    +  +G+  W   G K+ + + + +R  
Sbjct: 4   SKYFLPVLKEEPSEAQVTSHKLMLRSGMIR---QQAAGIYTWLPLGLKVLKNIENIVRSN 60

Query: 287 IK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P +   HLW +SG +D+Y   M   +   D           P N     
Sbjct: 61  MNKAGALEVLMPCIQPAHLWMESGRFDNYGKEMLKFQDRHDNT-----LLFGPTNEDMIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +F H +KSY++LP  L      +R+E      G+MR R F   DA+ F   E+   +  
Sbjct: 116 DIFRHNIKSYKDLPKNLYHIQWKFRDEIRPRF-GVMRGREFLMKDAYSFDINEENAVKTY 174

Query: 406 -KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV--------LDTIK 456
            +++   I+ ++D G   I V     P     S      AE     +        L    
Sbjct: 175 NQMYQAYINTFRDLGVFAIPVIADNGPIGGNLSHEFHIIAETGESTIYYNKRFKTLKDNP 234

Query: 457 NSSQDRINTGVLLGEGAFYGPKFEYILKD-AIGRDWQCGTIQVDFNLPSRFNAFYVNSHS 515
           N   + I +     E      K     ++    +  + G I    +  S      +N   
Sbjct: 235 NIDVEEIKSWYAAAEEKHDVNKLPISEQEITSSKGIEVGHIFYIGSKYSVNMNALINDEH 294

Query: 516 EKCHPVMIHRAVFGSIERFIGIMIE-NFKGNLPLWL---SPIQAIVTTIT---SSAVEYA 568
            K  PV +     G I R +  +IE N      +W    +P +  +  +    S  VE A
Sbjct: 295 GKLTPVEMSSYGIG-ISRLVAAIIEANCNEKGIIWPSNVAPFKVSLINLNIHDSKCVELA 353

Query: 569 QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
            ++   L + ++ +  D        K   H +   P  II G K+A++  + ++      
Sbjct: 354 AKVYKELSAQNIEVLYDDTEARAGSKFATHDLIGSPYQIIIGPKKAADDIVELKNRKIGV 413

Query: 629 TQKVSLLDAIPILT 642
            + + + + I  + 
Sbjct: 414 IEDIEVENLIHYIK 427


>gi|260462251|ref|ZP_05810495.1| prolyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075]
 gi|259032111|gb|EEW33378.1| prolyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075]
          Length = 442

 Score =  201 bits (510), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 75/434 (17%), Positives = 135/434 (31%), Gaps = 44/434 (10%)

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEI 294
               E+E   HR + R   +    + G G   W   G ++   +   +R +       EI
Sbjct: 13  ENPREAEIVSHRLMLRAGMIR---QQGQGSFSWLPLGKRVLDKVCQIIREEQNRAGALEI 69

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
             P +    LW++SG +D Y   M  +K   D     R     P N      +    +KS
Sbjct: 70  LMPTIQSADLWRESGRYDDYGKEMLRIKDRQD-----RDMLYGPTNEEVVTEIVRAYVKS 124

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIIS 413
           Y++LP+ L      +R+E      G+MR R F   DA+ F    E       ++    + 
Sbjct: 125 YKDLPLNLYHIQWKFRDEVRPRF-GVMRSREFLMKDAYSFDLDFEGAKAAYNRMFVSYLR 183

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALW---DDAENIMKGVLDTIKNSSQDRINTGVLLG 470
            +   G + I ++  T P     S       D  E+ +    D +              G
Sbjct: 184 TFTRMGLQAIPMRADTGPIGGDLSHEFIILADTGESQVYCDRDYLSLQVPGENTDFANDG 243

Query: 471 EGAF--------YGPKFEYILKDAIG----------RDWQCGTI-QVDFNLPSRFNAFYV 511
           E A         Y    E   + A            R  + G I            A   
Sbjct: 244 EIADIVKTWTTPYAATDEMHDQAAWDKLGEADRVSARGIEVGHIFHFGDKYSKPMGAKVT 303

Query: 512 NSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN----LPLWLSPIQAIVTTITSSAVE 566
               +      +    +G    R +  +IE          P  ++P    V  +     +
Sbjct: 304 GPDGKDH---FVSGGSYGIGPSRLVAAIIEASHDENGIIWPEAVAPFDIGVINMKVGDAD 360

Query: 567 Y---AQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRR 623
                 E+          +  D  ++    K     +  +P  +I G +  +   + I+ 
Sbjct: 361 CDRVCDELYAAFADAGKDVLYDDTDQRPGGKFATADLIGLPWQVIVGPRGVAAGEVEIKN 420

Query: 624 FGSTTTQKVSLLDA 637
             +   + + + +A
Sbjct: 421 RKTGERETLPIAEA 434


>gi|57640485|ref|YP_182963.1| prolyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
 gi|74503571|sp|Q5JF49|SYP_PYRKO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|57158809|dbj|BAD84739.1| prolyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
          Length = 481

 Score =  201 bits (510), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 78/426 (18%), Positives = 160/426 (37%), Gaps = 56/426 (13%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
           +        E+    + +L     +        G+  W   G KI + +  ++  +++  
Sbjct: 1   MAVERKKWSENFSEWYNELIETAGIQDKRYPVKGMNVWLPYGLKIMRNIERFIHAEMERT 60

Query: 290 DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
            ++E+  P ++ +  + +++ H   +   ++ V  A     D+R   L+P +     ++F
Sbjct: 61  GHDEVLFPALIPETEFQKEAEHIKGFEGEVYWVTHAGLEPLDVR-LILRPTSETAMYSMF 119

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT-QDDAHVFCTKEQMFNECLKI 407
           +  ++S+ +LP ++ +  +VYR E       L+RVR  +   +AH      +     +K 
Sbjct: 120 SLWIRSHADLPFKIYQIVNVYRYETK-HTRPLIRVREISRFFEAHTAHDSYEDAERQIKE 178

Query: 408 HNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGV 467
              I      F     ++               WD                         
Sbjct: 179 DLEIFDNLARFLALPYIISKRPE----------WDKF----------------------- 205

Query: 468 LLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF-NAFYVNSHSEKCHPVMIHRA 526
               GA+Y    E ++ D  GR  Q GT+    N    F  A+ +   +E      +H+ 
Sbjct: 206 ---PGAYYSLGAEVMMPD--GRTLQIGTMH---NYRQNFAKAYNIQYETETGDHEYVHQT 257

Query: 527 VFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVE-----YAQEIANLLKS 577
            FG  ER +  +I    ++    LP  ++PIQ ++  I     E     YA+EIA  L++
Sbjct: 258 TFGMSERLLAAVIAIHGDDRGMVLPPTIAPIQVVIVPIPKKDSEADVFAYAREIAEELRT 317

Query: 578 HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
             + +  D R+     K  +  +K +P+ I  G ++   +   + R  +     V   + 
Sbjct: 318 AGIRVHVDERDIRPGRKYYDWELKGVPLRIEVGPRDVEGKKAVLARRDTLEKITVERDNI 377

Query: 638 IPILTK 643
           +  + K
Sbjct: 378 VEEVRK 383


>gi|302348192|ref|YP_003815830.1| Prolyl-tRNA synthetase [Acidilobus saccharovorans 345-15]
 gi|302328604|gb|ADL18799.1| Prolyl-tRNA synthetase [Acidilobus saccharovorans 345-15]
          Length = 482

 Score =  201 bits (510), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 76/432 (17%), Positives = 163/432 (37%), Gaps = 62/432 (14%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRRKIK 288
            +         +       +    +++        G+  W   G++I + +   +R+ + 
Sbjct: 1   MVKTKRERWHNNFSEWFDWILDRAEIYDYGRYPVKGMGVWMPYGFQIRRRVTDLLRKLLD 60

Query: 289 D-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA 346
           +  +EE+  P ++   +  ++S H   +   ++ V        D +  AL+P +      
Sbjct: 61  ETGHEEVLFPLLIPDWMLAKESEHVKGFEDEVYWVTHGGLEELD-QKLALRPTSETPITY 119

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD-DAHVFCTK-EQMFNEC 404
             +  ++SY++LP +  +  SV+R E   +   L+RVR  +   +AH      E   ++ 
Sbjct: 120 YESLWVQSYKQLPRKFYQIVSVFRYETK-ATRPLIRVREISMFKEAHTVHESFEDAESQV 178

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            +  ++    +   G   I+ +              WD                      
Sbjct: 179 KEAIDVYRKFFDSLGIPYIISRRPD-----------WDKF-------------------- 207

Query: 465 TGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMI 523
                  GA Y   F+ ++ D  GR  Q GT+  +  N    F+        +  +P   
Sbjct: 208 ------AGALYTIAFDTVMPD--GRTLQIGTVHNLGQNFTKAFSFRIQTRDEKFDYP--- 256

Query: 524 HRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI-------TSSAVEYAQEIA 572
            +  +G  +R +  +I    ++    LP  ++P QA++  I       +   +EY++ + 
Sbjct: 257 WQTSYGVSDRVVATLIAIHGDDMGLVLPPDIAPTQAVIIPIPSQSEEDSRKVLEYSRGVL 316

Query: 573 NLLKSHHLSIETDFRNET-INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
           + L S  +  + D R +T    K      K +P+ +  G +EAS  ++ I R  +   + 
Sbjct: 317 STLLSSGIRAKLDDREDTTPGDKYYYWDAKGVPVRVEIGPREASGNTVTIVRRDTLEKRT 376

Query: 632 VSLLDAIPILTK 643
           V L +A+  + K
Sbjct: 377 VPLSEAVGSIKK 388


>gi|150396141|ref|YP_001326608.1| prolyl-tRNA synthetase [Sinorhizobium medicae WSM419]
 gi|166980159|sp|A6U7Z3|SYP_SINMW RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|150027656|gb|ABR59773.1| prolyl-tRNA synthetase [Sinorhizobium medicae WSM419]
          Length = 442

 Score =  200 bits (509), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 78/449 (17%), Positives = 148/449 (32%), Gaps = 54/449 (12%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
           +       +E+E   HR + R   +    +  +G+  W   G ++   + + +R +    
Sbjct: 8   MPILKENPKEAEIVSHRLMLRTGMIR---QQSAGIYTWLPLGKRVLDKVNAVIREEQNRS 64

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
              E+  P +    LWQ+SG +D+Y   M  +K   D     R     P N      +F 
Sbjct: 65  GAIELLMPTLQSAELWQESGRYDAYGKEMLRIKDRQD-----RPMLYGPTNEEMITDIFR 119

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IH 408
             +KSYR LP+ L      +R+E      G MR R F   DA+ F           K + 
Sbjct: 120 SYVKSYRNLPLNLYHIQLKFRDEIRPRF-GTMRSREFLMKDAYSFDLDRAGAEHAYKRMF 178

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
              +  +   G   I ++  T P     S         I+    ++     +D +   + 
Sbjct: 179 AAYLRTFDRLGLRAIPMRADTGPIGGNLSHEF-----IILADTGESEVFCHKDFLGFDIP 233

Query: 469 LGEGAF----------------YGPKFEYILKDAIG----------RDWQCGTIQV-DFN 501
             +  F                Y    E   + A            R  + G I      
Sbjct: 234 GEDTNFDDVASMNAIFEKWTSRYAATSEMHEEAAFDAIPEGERLSARGIEVGHIFYFGTK 293

Query: 502 LPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGNLPLWL---SPIQAI 556
                 A  +    ++     +H   +G    R +  +IE +   N  +W    +P   +
Sbjct: 294 YSEAMGAKVLGPDGKEHT---VHMGSYGIGPTRLVPAIIEASHDDNGIIWPKGIAPFDIV 350

Query: 557 VTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
           V  +     +       + + L      +  D  +E    K     I  +P+ +I G + 
Sbjct: 351 VINMKTGDDACDTACGRLYSDLGKAGFDVLLDDTDERAGGKFATADIIGVPVQVIVGPRS 410

Query: 614 ASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +   + ++   +   + +++  AI  L 
Sbjct: 411 IANGEVEVKDRKTGARETMTVEAAINKLV 439


>gi|119872334|ref|YP_930341.1| prolyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
 gi|152112945|sp|A1RSR6|SYP_PYRIL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|119673742|gb|ABL87998.1| prolyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
          Length = 488

 Score =  200 bits (509), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 84/432 (19%), Positives = 167/432 (38%), Gaps = 62/432 (14%)

Query: 228 QQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI 287
           ++        L+ +       L RE +L+ +     G   W   G K+ + + + +RR  
Sbjct: 5   REAKPYTKDKLKTNLIEWFHWLLREAELYDVRYPVKGAYVWRPYGMKLRRNVENLIRRIH 64

Query: 288 KD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +  +EE+  P  +    + ++S H   +   +F V    +         L+P +    +
Sbjct: 65  DETGHEEVLFPVFIPYEFFSKESQHIRGFEKEVFWVSKGGEG---GERLILRPTSETAIM 121

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD-DAHVFC-TKEQMFNE 403
            +    ++ Y++LP+RL +  SV+R E     H ++R+R  +   +AH    T+E    +
Sbjct: 122 PMVKLWIQDYKDLPLRLYQIVSVFRAETK-MTHPMIRLREISMFKEAHTVHATREDAERQ 180

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             +   +   I+ +     ++ K              WD                     
Sbjct: 181 IREAVEIYKRIFDEMCLAYMINKRPN-----------WDKF------------------- 210

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVM 522
                   GA Y   F+ IL D  GR  Q GT+     N    F   Y++    +    +
Sbjct: 211 -------AGAEYTIAFDTILPD--GRTLQIGTVHYLGVNFTKVFEVTYLDIDGTRK---L 258

Query: 523 IHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTIT------SSAVEYAQEIA 572
            H   +G  ER I  M+    ++    LP  L+PIQ ++  I        + +++  E+ 
Sbjct: 259 AHTTSYGISERSIAAMLITHGDDGGTTLPPKLAPIQVVIVPIFYGEEEMPTVMKFVDEVY 318

Query: 573 NLLKSHHLSIETDF-RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
            +L+   + I  D  R++T  +K     +K +P+ I  G ++  +R + + R  +     
Sbjct: 319 RMLRDVGIRIHIDDRRDKTPGWKFYYWELKGVPLRIEVGRRDIEKRQVVVTRRDTLEKYA 378

Query: 632 VSLLDAIPILTK 643
           VSL + +  + +
Sbjct: 379 VSLGELVDAVKQ 390


>gi|319408595|emb|CBI82250.1| Prolyl-tRNA synthetase [Bartonella schoenbuchensis R1]
          Length = 441

 Score =  200 bits (509), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 82/446 (18%), Positives = 148/446 (33%), Gaps = 40/446 (8%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +       +E+E   HR + R   +    +  +G+  W   G K+   + + +R +
Sbjct: 4   SKYFIPILKENPKEAEIVSHRLMLRAGMIR---QQTAGIYSWLPLGKKVLDKVCTIIREE 60

Query: 287 I-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
             +    EI  P +    LW +SG +D Y   M  +K      +  R     P N     
Sbjct: 61  QKQAGALEILMPTIQSVDLWHESGRYDDYGFEMLRIKD-----RQERDLLYGPTNEEIVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +F   ++SY++LP+ L +    +R+E      G+MR R F   DA+ F    E      
Sbjct: 116 DIFRSYVRSYKDLPLNLYQIQWKFRDEIRPRF-GVMRSREFLMKDAYSFDLDYESAKISY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            ++    +  +   G + I  +  T P     S      AE     +    +    +   
Sbjct: 175 NRMFVAYLRTFSRMGLKVIPTRADTGPIGGERSHEFTILAETGESAIFCDKQFLDINAPL 234

Query: 465 TGVLLGEGA-----------FYGPKFEYILKDAIG----------RDWQCGTIQVDFNLP 503
             +   +             FY    E   ++             R  + G I       
Sbjct: 235 FSIDFTDKTVLTDIVKQWTTFYAATEEMHNEEEWSKIPKSNQLSARGIEVGHIFYFGTKY 294

Query: 504 SRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNLPLWLSPIQAI---VT- 558
           S      V     K HPV +     G   R +   IE +   N  +W  PI      +  
Sbjct: 295 SVPMEAKVMGKDGKEHPVFMGSYGIG-PSRLVAAAIEASHDENGIIWPKPIAPFDFGIIN 353

Query: 559 --TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASE 616
                       + +   L         D RNE    K     +  +P  II G K A++
Sbjct: 354 MKPDDKKCNHMCETLYQGLIRAGFDPLLDDRNERPGVKFAIMDLIGLPTQIIVGPKSAAQ 413

Query: 617 RSIGIRRFGSTTTQKVSLLDAIPILT 642
             + I+   +   + +++   +  L+
Sbjct: 414 NEVEIKDRKTGAKESLTIESVLNRLS 439


>gi|13471387|ref|NP_102953.1| prolyl-tRNA synthetase [Mesorhizobium loti MAFF303099]
 gi|81855688|sp|Q98KS5|SYP_RHILO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|14022129|dbj|BAB48739.1| proline-tRNA ligase [Mesorhizobium loti MAFF303099]
          Length = 442

 Score =  200 bits (509), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 74/433 (17%), Positives = 139/433 (32%), Gaps = 42/433 (9%)

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEI 294
               E+E   HR + R   +    + G G   W   G ++   +   +R +       EI
Sbjct: 13  ENPREAEIVSHRLMLRAGMIR---QQGQGSFSWLPLGKRVLDKVCQIIREEQNRAGALEI 69

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
             P +    LW++SG ++ Y   M  +K   D     R     P N      +F   +KS
Sbjct: 70  LMPTIQSADLWRESGRYNDYGKEMLRIKDRQD-----RDMLYGPTNEEMVTEIFRAYVKS 124

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIIS 413
           Y++LP+ L      +R+E      G+MR R F   DA+ F    E   +   ++    + 
Sbjct: 125 YKDLPLNLYHIQWKFRDEVRPRF-GVMRSREFLMKDAYSFDLDFEGARSAYNRMFVSYLR 183

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALW---DDAENIMKGVLDTIKNSSQDRINTGVLLG 470
            +   G + I ++  T P     S       D  E+ +    D +  +           G
Sbjct: 184 TFTRMGLQAIPMRADTGPIGGDLSHEFIILADTGESQVFCHRDYLSLAVPGANTDFANDG 243

Query: 471 EGAF--------YGPKFEYILKDAI----------GRDWQCGTI-QVDFNLPSRFNAFYV 511
           E A         Y    E   + A            R  + G I            A   
Sbjct: 244 EIADIVKTWTTPYAATDEMHDEAAWEKVPESDKVSARGIEVGHIFHFGEKYSKPMGAKVT 303

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTITSSAVEY 567
               +          +     R +  +IE          P  ++P    +  +     + 
Sbjct: 304 GPDGKDHFASGGSYGI--GPSRLVAAIIEASHDENGIIWPDAVAPFDIGLINMKVGDADC 361

Query: 568 ---AQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRF 624
              ++E+     +    +  D  ++    K     +  +P  +I G +  +   + I+  
Sbjct: 362 DRVSEELNAAFTAAGKDVLYDDTDQRPGGKFATADLIGLPWQVIVGPRGVAAGEVEIKNR 421

Query: 625 GSTTTQKVSLLDA 637
            +   + + + DA
Sbjct: 422 RTGERETLPIADA 434


>gi|118595268|ref|ZP_01552615.1| prolyl-tRNA synthetase [Methylophilales bacterium HTCC2181]
 gi|118441046|gb|EAV47673.1| prolyl-tRNA synthetase [Methylophilales bacterium HTCC2181]
          Length = 411

 Score =  200 bits (509), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 81/434 (18%), Positives = 154/434 (35%), Gaps = 44/434 (10%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  ++ +     E+E   H+ + R   +  +   GSG+  W   G ++ + + + +R 
Sbjct: 3   ASKFYISTFKEAPAEAELTSHKLMIRAGLIKKL---GSGLYTWMPMGLRVLKKIENTIRE 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           +++     E+  P +    LW+++G W+ +   M  +    D     R F   P +    
Sbjct: 60  EMQQAGAVELLMPAIQPAELWEETGRWELFGPQMLKISDRHD-----RPFCFGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
             +  + L SY++LP+   +    +R+E      G+MR R F   DA+ F    E + + 
Sbjct: 115 TDLVRNELNSYKQLPMNFYQIQMKFRDEIRPRF-GVMRAREFLMKDAYSFHADIESLKHT 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +     +I+   G     V+         GS      A            +S +D I
Sbjct: 174 YDLMFKAYNAIFTKLGLIFRAVQADNGAIGGDGSHEFHVLA------------DSGEDEI 221

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRD-WQCGTI------QVDFNLPSRFNAFYVNSHSE 516
                  E + +    E        R+   C  I      Q+         A ++N   +
Sbjct: 222 VY----DEHSDFAANIEVAKDHPDKRNLKTCRGIEVGHIFQLGTKYSEAMKATFINQSGK 277

Query: 517 KCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTI----TSSAVEYA 568
              P+++     G   R I   IE    +     P  ++P + I+T I    +SS  E  
Sbjct: 278 P-SPMIMGCYGIGVS-RIIAAAIEQNHDDKGIIFPESMAPFEVIITPIGYDKSSSVKEGV 335

Query: 569 QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
            ++  LL +    +  D R         E  +  IP  I   +    E     +    T 
Sbjct: 336 DDLYQLLIAEGYDVLLDDRGLRPGIMFSEAELIGIPHRITVSETTLKENKYEYKNRSKTD 395

Query: 629 TQKVSLLDAIPILT 642
            + ++  D I  L 
Sbjct: 396 AEMIASNDLIRHLK 409


>gi|110633394|ref|YP_673602.1| prolyl-tRNA synthetase [Mesorhizobium sp. BNC1]
 gi|123162548|sp|Q11JI8|SYP_MESSB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|110284378|gb|ABG62437.1| prolyl-tRNA synthetase [Chelativorans sp. BNC1]
          Length = 442

 Score =  200 bits (508), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 71/433 (16%), Positives = 143/433 (33%), Gaps = 54/433 (12%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
            E+E   HR + R   +    + G+G   W   G ++   +   +R +      +EI  P
Sbjct: 16  REAEIVSHRLMLRSGMIR---QQGAGSFSWLPLGKRVLDKVCQIVREEQDRAGAQEILMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW +SG ++ Y   M  ++   D     R     P N      +F   +KSY++
Sbjct: 73  TIQSADLWIESGRYNDYGKEMLRIRDRQD-----RAMLYGPTNEEMVTDIFRAYVKSYKD 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYK 416
           LP+ L      +R+E      G+MR R F   DA+ F    E       ++    +  + 
Sbjct: 128 LPLNLYHIQWKFRDEVRPRF-GVMRSREFLMKDAYSFDLDYEGAKAAYNRMFVAYLRTFA 186

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF-- 474
             G + I ++  T P     S         I+    ++    ++D ++  V   +  F  
Sbjct: 187 RMGLKAIPMRADTGPIGGDLSHEF-----IILASTGESEVFCNKDFLDLPVPPADVDFTN 241

Query: 475 --------------YGPKFEYILKDAIG----------RDWQCGTI-QVDFNLPSRFNAF 509
                         Y    E   + A            R  + G I           NA 
Sbjct: 242 DAEIGGVVSEWTTPYAATDEMHDEAAWAEVPAEKQLAARGIEVGHIFHFGTKYSKPMNAK 301

Query: 510 YVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN----LPLWLSPIQAIVTTITSSA 564
                 ++     +    +G    R    +IE    +     P  ++P    +  +    
Sbjct: 302 VTGPDGQEH---FVSMGSYGIGPTRLTAAIIEASHDDGGIIWPESVAPFDVALINMKVGD 358

Query: 565 VEY---AQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
            E     +E+   + +    +  D  ++    K     +  +P  +I G +  +   + +
Sbjct: 359 AECDRVCEELYAGMTAAGREVLYDDTDQRAGAKFATADLIGLPWQVIVGPRGIAAGEVEV 418

Query: 622 RRFGSTTTQKVSL 634
           +   +   + + +
Sbjct: 419 KNRATGERENLPI 431


>gi|18313148|ref|NP_559815.1| prolyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
 gi|74580888|sp|Q8ZVQ9|SYP_PYRAE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|18160660|gb|AAL63997.1| prolyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
          Length = 488

 Score =  200 bits (507), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 85/442 (19%), Positives = 168/442 (38%), Gaps = 62/442 (14%)

Query: 228 QQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI 287
           ++        L+ +       L RE +L+ +     G   W   G KI + + + +R+  
Sbjct: 5   REARPHSREKLKSNLIEWFHWLLREAELYDVRYPVKGAYVWRPYGMKIRRNVENLIRKFH 64

Query: 288 KD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +  +EE+  P  +    + ++S H   +   +F V    +         L+P +    +
Sbjct: 65  DETGHEEVLFPVFIPYEFFGKESQHIKGFEKEVFWVSKGGEA---GERLVLRPTSETAIM 121

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD-DAHVFCTKEQMFNEC 404
            +    ++ Y++LP+R+ +  SV+R E     H ++R+R  +   +AH     ++     
Sbjct: 122 PMVKLWIQDYKDLPLRVYQIVSVFRAETK-MTHPMIRLREISMFKEAHTVHADKEDAERQ 180

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
           ++                                    +A  I K + D +  +      
Sbjct: 181 VR------------------------------------EAVEIYKRIFDEMCLAYLINKR 204

Query: 465 TGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMI 523
                  GA Y   F+ IL D  GR  Q GT+     N    F   Y+++   +    + 
Sbjct: 205 PEWDKFAGAEYTIAFDTILPD--GRSLQIGTVHYLGTNFTKVFEVTYLDADGTRK---LA 259

Query: 524 HRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVE------YAQEIAN 573
           H   +G  ER I  M+    ++    LP  L+PIQ +V  I     E        +E AN
Sbjct: 260 HTTSYGISERSIAAMLITHGDDGGTTLPPKLAPIQVVVIPIYYGEEEAPLVMPLVRETAN 319

Query: 574 LLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
            L    + +  D R ++T  +K     +K +P+ +  G ++  +R   I R  +     V
Sbjct: 320 RLNEAGIRVYVDERADKTPGWKFYYWELKGVPLRVEIGKRDVEKRQAVIARRDTLEKYAV 379

Query: 633 SLLDAIPILTK--ESLPPDCQK 652
           S+ + +  + +  +S+  + +K
Sbjct: 380 SINELVDAVKQLMKSVEENLRK 401


>gi|171185819|ref|YP_001794738.1| prolyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta]
 gi|259511627|sp|B1Y963|SYP_THENV RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|170935031|gb|ACB40292.1| prolyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta]
          Length = 487

 Score =  200 bits (507), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 83/426 (19%), Positives = 160/426 (37%), Gaps = 62/426 (14%)

Query: 234 YLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYE 292
           +     ++       L RE +L+ +     G   W   G K+ + +   +RR   +  +E
Sbjct: 10  HPKEKLKNVIEWFHWLLREAELYDVRYPVKGAYVWRPYGMKLRRNVEELIRRVHDETGHE 69

Query: 293 EINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           E+  P  +    + ++S H   +   +F V    +         L+P +    + +    
Sbjct: 70  EVLFPVFIPYEFFGKESQHIRGFEKEVFWVSKGGEG---GERLVLRPTSETAIMPMVKLW 126

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD-DAHVFCTK-EQMFNECLKIHN 409
           ++ Y++LP+RL +  SV+R E     H ++R+R  +   +AH      E    +  +   
Sbjct: 127 IQDYKDLPLRLYQIVSVFRAETK-MTHPMIRLREISMFKEAHTVHVDREDAERQVREAVE 185

Query: 410 LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL 469
           +   I+ +     ++ K              WD                           
Sbjct: 186 IYKRIFDEMCLAYMINKRPD-----------WDKF------------------------- 209

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
             GA Y   F+ +L D  GR  Q GT      N    F   Y+++   +    + H   +
Sbjct: 210 -AGAEYTIAFDTVLPD--GRTLQIGTAHYLGTNFTRVFEVTYLDADGTRK---LAHTTSY 263

Query: 529 GSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVE------YAQEIANLLKSH 578
           G  ER I  M+    ++    LP  L+PIQ  V  I  S  E      + +E+   LK  
Sbjct: 264 GISERSIAAMLITHGDDGGTTLPPKLAPIQIAVVPIYYSDEEMPLVMKFVEEVVAALKGA 323

Query: 579 HLSIETDF-RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
            L +  D  R++T  +K     +K +P+ +  G ++  +R + + R  +     V+L + 
Sbjct: 324 GLRLHVDDRRDKTPGWKFYYWELKGVPLRLEVGKRDVEKRQVVVTRRDTLEKYAVALGEL 383

Query: 638 IPILTK 643
           +  + +
Sbjct: 384 VDAVRE 389


>gi|239947222|ref|ZP_04698975.1| prolyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes
           scapularis]
 gi|241068545|ref|XP_002408465.1| tRNA synthetases class II, putative [Ixodes scapularis]
 gi|215492453|gb|EEC02094.1| tRNA synthetases class II, putative [Ixodes scapularis]
 gi|239921498|gb|EER21522.1| prolyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes
           scapularis]
          Length = 426

 Score =  199 bits (506), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 86/433 (19%), Positives = 158/433 (36%), Gaps = 28/433 (6%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  L        E++   H+ + R   +    +  +G+  W   G K+ + + + +R  
Sbjct: 4   SKYFLPVLKEEPSEAQVTSHKLMFRSGMIR---QQAAGIYTWLPLGLKLLKNIENIVRLN 60

Query: 287 IK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P +   HLW +SG +D+Y   M   +   D           P N     
Sbjct: 61  MNKAGALEVLMPCIQPAHLWMESGRFDNYGKEMLKFQDRHDNT-----LLFGPTNEDMIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +F H +KSY++LP  L      +R+E      G+MR R F   DA+ F   E+   +  
Sbjct: 116 DIFRHNIKSYKDLPKNLYHIQWKFRDEIRPRF-GVMRGREFLMKDAYSFDINEENAVKTY 174

Query: 406 -KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE--------NIMKGVLDTIK 456
            +++   I+ ++D G   I V     P     S      AE        +     L    
Sbjct: 175 NQMYQAYINTFRDLGVFAIPVIADNGPIGGNLSHEFHIIAETGESTIYYDKRFKTLKDNS 234

Query: 457 NSSQDRINTGVLLGEGAFYGPKFEYILKD-AIGRDWQCGTIQVDFNLPSRFNAFYVNSHS 515
           +   + I +     E      K     ++    +  + G I    +  S      +N   
Sbjct: 235 DIDVEEIKSWYAAAEEKHDVNKLPISEQEITSSKGIEVGHIFYIGSKYSVNMNALINDEH 294

Query: 516 EKCHPVMIHRAVFGSIERFIGIMIE-NFKGNLPLWL---SPIQAIVTTIT---SSAVEYA 568
            K  PV +     G I R +  +IE N      +W    +P +  +  +    S  VE A
Sbjct: 295 GKLTPVEMSSYGIG-ISRLVAAIIEANCDEKGIIWPSSVAPFKVSLINLNIHDSKCVELA 353

Query: 569 QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
            +    L + ++ +  D        K   H +   P  II G K+A++  + ++   S  
Sbjct: 354 AKAYKELSAQNIEVLYDDTEARAGSKFATHDLIGSPYQIIIGPKKAADNIVELKNRKSGV 413

Query: 629 TQKVSLLDAIPIL 641
            + + +   + IL
Sbjct: 414 IEDIEIGSLMSIL 426


>gi|307942137|ref|ZP_07657488.1| prolyl-tRNA synthetase [Roseibium sp. TrichSKD4]
 gi|307774423|gb|EFO33633.1| prolyl-tRNA synthetase [Roseibium sp. TrichSKD4]
          Length = 443

 Score =  199 bits (506), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 68/444 (15%), Positives = 153/444 (34%), Gaps = 37/444 (8%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  L       +E+E   HR + R   +    +  +G+  W   G ++ + +   +  +
Sbjct: 4   SKYFLPILKETPKEAEIVSHRLMLRAGMIR---QQSAGIYSWLPMGHRVLRKIERIVEEE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
                  ++  P +    LW++SG +D+Y   M  +     T +  R     P N     
Sbjct: 61  QNRAGAVQLLMPTIQSAELWRESGRYDAYGKEMLRI-----TDRHERDILFGPTNEEMIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +F   ++SY++LP+ L      +R+E      G+MR R F   DA+ F    E      
Sbjct: 116 DIFRGYVRSYKDLPLNLYHIQWKFRDEVRPRF-GVMRGREFLMKDAYSFDLDKESAVESY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALW---DDAENIMKGVLDTIKNSSQD 461
            ++    +  YK  G   I +K  T P     S       D  E+ +    D +   +  
Sbjct: 175 NRMFVAYLRTYKRMGLTAIPMKAETGPIGGDLSHEFIVLADTGESEVYCHADYLTKQTPG 234

Query: 462 R-------INTGVLLGEGAFYG-------PKFEYILKDAIGRDWQCGTIQVDFNLPSRFN 507
                   +N  V      +           FE  + +      +   +   F   ++++
Sbjct: 235 EDVNFDGDLNPIVNDWTSHYAATEDVVDKAAFEAKVPEDKRIVARGIEVGQTFYFGTKYS 294

Query: 508 A-FYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGNLPLW---LSPIQAIVT--- 558
                         V +H   +G  + R +G +IE +      +W   ++P    +    
Sbjct: 295 EPMGAKVAGSDGKEVPVHMGSYGVGVSRLLGALIEASHDDAGIIWHKSVAPFHVGLINLK 354

Query: 559 TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERS 618
               +     +++    ++  + +  D  +     K     +  +P  ++ G +   +  
Sbjct: 355 PGDETTDAACEDLYAKFEAAGVEVLYDDTDNRAGAKFASMDLIGLPYQVVAGPRGLKDGV 414

Query: 619 IGIRRFGSTTTQKVSLLDAIPILT 642
           + ++   +   + ++    +  L 
Sbjct: 415 LEVKNRATGEKEMLTPEATLNKLV 438


>gi|58698845|ref|ZP_00373719.1| prolyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|225630527|ref|YP_002727318.1| prolyl-tRNA synthetase [Wolbachia sp. wRi]
 gi|254782927|sp|C0R3N5|SYP_WOLWR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|58534643|gb|EAL58768.1| prolyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|225592508|gb|ACN95527.1| prolyl-tRNA synthetase [Wolbachia sp. wRi]
          Length = 422

 Score =  199 bits (506), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 86/436 (19%), Positives = 162/436 (37%), Gaps = 39/436 (8%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  L         ++   H+   R   +  IA   SG+  W   G  + + +   +R +
Sbjct: 4   SKYYLPTLKEKPAHAKIISHQYSLRAGLIKQIA---SGIYSWLPLGLLVLKNIEDIIRDE 60

Query: 287 IK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P V   +LW++SG +D Y   M  +K      +        P +     
Sbjct: 61  MDKSGAIEVLMPCVQPANLWRESGRYDDYGKEMLRIKD-----RHEEDMLFGPTHEEVAT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +    +KSY++LP+ L +    +R+E     +G+MR R F   DA+ F    E   N  
Sbjct: 116 DLIRDVVKSYKDLPLCLYQIQWKFRDEVRPR-YGVMRGREFLMKDAYSFDVDYEGALNSY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
             ++   I I+K  G   I V+  T P     S      A N  +  L    N   + + 
Sbjct: 175 NLMYKTYIKIFKRMGLTPIGVRADTGPIGGNLSHEFHILA-NTGESTL-YYDNKFSELLE 232

Query: 465 TGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK------- 517
           +  +    + Y       + D +     C   Q   N+       ++    +K       
Sbjct: 233 SEDVESLKSIYA------VADDMHDPETCPISQEQLNVSKGIEIGHIFYFGDKYSKPMKA 286

Query: 518 ------CHPVMIHRAVFGS-IERFIGIMIENFKGN----LPLWLSPIQAIVTTITSSAVE 566
                    V IH   +G  + R +G +IE F  +     P  ++P +  +  + +   E
Sbjct: 287 SVTSQDGKNVNIHMGSYGIGVSRLVGAIIEAFHDDKGIIWPESVAPFRIGLINLQTKVTE 346

Query: 567 YAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS 626
            A +I   LKS    +  D    ++  K     +  +P  II G K   E+ + ++   +
Sbjct: 347 AADKIYKALKS--DEVLYDDTEGSVGVKFSRMDLIGLPWQIIVGKKAIDEKIVEVKNRAT 404

Query: 627 TTTQKVSLLDAIPILT 642
              +++ + +AI   +
Sbjct: 405 GEVKEMQIEEAINHFS 420


>gi|225631202|ref|ZP_03787900.1| prolyl-tRNA synthetase [Wolbachia endosymbiont of Muscidifurax
           uniraptor]
 gi|225591110|gb|EEH12294.1| prolyl-tRNA synthetase [Wolbachia endosymbiont of Muscidifurax
           uniraptor]
          Length = 422

 Score =  199 bits (505), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 86/436 (19%), Positives = 160/436 (36%), Gaps = 39/436 (8%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  L         ++   H+   R   +  IA   SG+  W   G  + + +   +R +
Sbjct: 4   SKYYLPTLKEKPAHAKIISHQYSLRAGLIKQIA---SGIYTWLPLGLLVLKNIEDIIRDE 60

Query: 287 IK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E   P V    LW++SG +D Y   M  +K      +        P +     
Sbjct: 61  MNKSGAIEALMPCVQPASLWRESGRYDDYGKEMLRIKD-----RHEEDMLFGPTHEEIAT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +    +KSY++LP+ L +    +R+E     +G+MR R F   DA+ F    E   N  
Sbjct: 116 DLIRDVVKSYKDLPLCLYQIQWKFRDEVRPR-YGVMRGREFLMKDAYSFDVDYEGALNSY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
             ++   I I+K  GF  I V+  T P     S      A N  +  L    N   + + 
Sbjct: 175 NLMYKTYIKIFKRMGFTPIGVRADTGPIGGNLSHEFHILA-NTGESTL-YYDNKFSELLE 232

Query: 465 TGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK------- 517
           +  +    + Y       + D +     C   Q   N+       ++    +K       
Sbjct: 233 SEDIESLKSIYA------VADDMHDPETCPISQEQLNVSKGIEIGHIFYFGDKYSKPMKA 286

Query: 518 ------CHPVMIHRAVFGS-IERFIGIMIENFKGN----LPLWLSPIQAIVTTITSSAVE 566
                    V IH   +G  + R +G +IE F  +     P  ++P +  +  +     E
Sbjct: 287 SVTSQDGKNVNIHMGSYGIGVSRLVGAIIEAFHDDKGIIWPESVAPFRIGLINLQPKVTE 346

Query: 567 YAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS 626
            A +I   LKS    +  D    ++  K     +  +P  II G K   E+ + ++   +
Sbjct: 347 AADKIYKALKS--DEVLYDDTEGSVGVKFSRMDLIGLPWQIIVGKKAIDEKIVEVKNRAT 404

Query: 627 TTTQKVSLLDAIPILT 642
              +++ + +A+   +
Sbjct: 405 GEVKEMPIEEAVNHFS 420


>gi|254466898|ref|ZP_05080309.1| prolyl-tRNA synthetase [Rhodobacterales bacterium Y4I]
 gi|206687806|gb|EDZ48288.1| prolyl-tRNA synthetase [Rhodobacterales bacterium Y4I]
          Length = 451

 Score =  199 bits (505), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 78/436 (17%), Positives = 150/436 (34%), Gaps = 38/436 (8%)

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEI 294
               E++   HR + R      I +  +G+  W   G+K+ + + S +   +I+  +  +
Sbjct: 13  ENPSEAQIVSHRLMLRAGM---IKQSSAGIYSWLPLGFKVLKKIESIVHDEQIRAGHIPM 69

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
               +    LW++SG +D Y   M  +K   D     R     P N      +F   + S
Sbjct: 70  LMATMQPADLWRESGRYDDYGQEMLRIKDRHD-----RDMLFGPTNEEMITDIFRAHVSS 124

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIIS 413
           Y++LP+ + +    +R+E      G+MR R F   D + F  +KE   +   +     + 
Sbjct: 125 YKDLPLTMYQVQWKFRDEIRPRF-GVMRGREFYMKDGYNFDLSKEDALHAYNRHLVSYLR 183

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNS----SQDRINT---- 465
            Y+  G + I ++    P     +      AE     V      +        I+     
Sbjct: 184 TYERMGLQAIPMRADGGPIGGDYTHEFLVLAETGESEVFYDSAVTDLTFGDRDIDYDSVE 243

Query: 466 ---GVLLGEGAFYGPKFEYILKDAIG-----RDWQCGTI---QVDFNLPSRFNAFYVNSH 514
               VL    + Y    E   +         R      I   Q+ +       +      
Sbjct: 244 QCQAVLEEFTSRYARTDETHDEALFNQIPEERRRVARGIEVGQIFYFGTKYSESMGATVQ 303

Query: 515 SEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGNLPLWL---SPIQAIVTTI---TSSAVE 566
                PV +H    G  + R +G +IE +   N  +W    +P    +  +      A  
Sbjct: 304 GPDGKPVPVHMGSHGIGVSRLLGAIIEASHDDNGIIWPEGVTPFHCGIVNLKQGDDEADA 363

Query: 567 YAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS 626
              ++   L +  L    D RNE    K     +  +P  I  G +      + +    +
Sbjct: 364 ACNQLYAALSAAGLDPLYDDRNERAGGKFATMDLIGLPWRITVGPRGLKNGVVELTSRRT 423

Query: 627 TTTQKVSLLDAIPILT 642
             ++++S  +A+  + 
Sbjct: 424 GESEELSPEEAVKKVV 439


>gi|212223716|ref|YP_002306952.1| prolyl-tRNA synthetase [Thermococcus onnurineus NA1]
 gi|212008673|gb|ACJ16055.1| prolyl-tRNA synthetase [Thermococcus onnurineus NA1]
          Length = 482

 Score =  199 bits (505), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 78/426 (18%), Positives = 163/426 (38%), Gaps = 56/426 (13%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
           +        E     + +L     +        G+  W   G KI + +  ++  +++  
Sbjct: 1   MKVERKKWSEEFSEWYNELIETAGIQDKRYPVKGMNIWLPYGLKIMRNIERFIHAEMERT 60

Query: 290 DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
            ++E+  P ++ +  + +++ H   +   +F V  A     D++   L+P +     ++F
Sbjct: 61  GHDEVLFPALIPETEFQKEAEHIAGFEGEVFWVTHAGHDPLDIK-LILRPTSETAMYSMF 119

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT-QDDAHVFCTKEQMFNECLKI 407
              ++S+ +LP ++ +  + YR E       L+RVR  +   +AH   T    F +  + 
Sbjct: 120 ALWIRSHADLPFKVYQIVNTYRYETK-HTRPLIRVREISRFFEAH---TAHDSFEDAERQ 175

Query: 408 HNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGV 467
               + I+ +      +  + ++          WD                         
Sbjct: 176 IKEDLEIFDNLAKFLAIPYIVSKRPD-------WDKF----------------------- 205

Query: 468 LLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF-NAFYVNSHSEKCHPVMIHRA 526
               GA+Y    E ++ D  GR  Q GT+    N    F  A+ +   +E      +H+ 
Sbjct: 206 ---PGAYYSLGAEVMMPD--GRTLQIGTMH---NYRQNFAKAYEILYETENGDHEYVHQT 257

Query: 527 VFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI-----TSSAVEYAQEIANLLKS 577
            FG  ER +  +I    ++    LP  ++PIQ ++  I      +    YA+EIA  L++
Sbjct: 258 TFGMSERLLAAVIAIHGDDRGMVLPPTIAPIQVVIVPIPKKDAGADVFTYAREIAEELRT 317

Query: 578 HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
             L +  D R+     K  +  +K +P+ I  G ++   R   + R  + T + V     
Sbjct: 318 AGLRVHVDERDIRPGRKFYDWELKGVPLRIEVGPRDVEGRKAVLARRDTLTKETVERDRI 377

Query: 638 IPILTK 643
           +  + +
Sbjct: 378 VEAVRR 383


>gi|49474193|ref|YP_032235.1| prolyl-tRNA synthetase [Bartonella quintana str. Toulouse]
 gi|81827622|sp|Q6FZX5|SYP_BARQU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|49239697|emb|CAF26072.1| Prolyl-tRNA synthetase [Bartonella quintana str. Toulouse]
          Length = 441

 Score =  198 bits (503), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 80/447 (17%), Positives = 150/447 (33%), Gaps = 44/447 (9%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  L       +E+E   HR + R   +    +  SG+  W   G K+   +   +R +
Sbjct: 4   SQYFLPLLKENPKEAEIISHRLMLRAGMIR---QQTSGIYSWLPLGKKVLDKVCKIIREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +     EI  P V    LW++SG +D Y   M  +K      +  R     P N     
Sbjct: 61  QERAGAVEILMPTVQSADLWRESGRYDDYGLEMLRIKD-----RQKRDLLYGPTNEEMVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +F   + SY++LP+ L      +R+E      G+MR R F   DA+ F    E      
Sbjct: 116 DIFRSYVHSYKDLPLNLYHIQWKFRDEIRPRF-GVMRSREFLMKDAYSFDLDYEGSKTSY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            ++    +  +   G + I ++  T P     S      AE     +    K       +
Sbjct: 175 NRMFVAYLRTFSCLGLKAIPMRADTGPIGGELSHEFIILAETGESAIFCDKKFFELTVPH 234

Query: 465 TGVLLGEGA-----------FYGPKFEYILKDAIG----------RDWQCGTI-QVDFNL 502
           + +   + A           FY    E   ++             R  + G I       
Sbjct: 235 SSIDFSDKAVLANIVKQWTSFYAATEEMHNEEEWAKVSDNDRLSARGIEVGHIFHFGTKY 294

Query: 503 PSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGNLPLWL---SPIQAIV 557
            +   A  +    ++    ++    +G    R +  +IE +   N  +W    +P    +
Sbjct: 295 SAPMGAKVMGQDGKEH---LVSMGSYGIGPSRLVAAVIEASHDENGIIWPKSIAPFDFGI 351

Query: 558 T---TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
                         + + + L         D RNE    K     +  +P  II G K  
Sbjct: 352 INMKPNDEKCTRACETLYSGLMQAGFDPLLDDRNERPGSKFATMDLIGLPTQIIVGPKSI 411

Query: 615 SERSIGIRRFGSTTTQKVSLLDAIPIL 641
           ++  + I+   +   + +++ + +   
Sbjct: 412 AQNEVEIKDRKTGVKKSLTVENVLNQF 438


>gi|301303992|ref|ZP_07210110.1| threonyl and Alanyl tRNA synthetase second additional domain
           protein [Escherichia coli MS 124-1]
 gi|300840789|gb|EFK68549.1| threonyl and Alanyl tRNA synthetase second additional domain
           protein [Escherichia coli MS 124-1]
          Length = 209

 Score =  198 bits (503), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 81/194 (41%), Positives = 123/194 (63%), Gaps = 3/194 (1%)

Query: 24  SDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMA 82
            DVA  I   LAK  +A  +NG++ D  D +  +  + IIT +D   L +IRHSCAH++ 
Sbjct: 1   MDVALDIGPGLAKACIAGRVNGELVDACDLIENDAQLSIITAKDEEGLEIIRHSCAHLLG 60

Query: 83  EAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLS 142
            A++ +WP  ++AIGP+I++GFYYD D ++  + +++  +EK+M E+  ++   +K+ +S
Sbjct: 61  HAIKQLWPHTKMAIGPVIDNGFYYDVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVS 120

Query: 143 HEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLM 201
             +ARE F ++ E+YKV IL E+I   +   LY   E+ D+CRGPHV +      F KLM
Sbjct: 121 WHEARETFANRGESYKVSILDENIAHDDKPGLYFHEEYVDMCRGPHVPNMRFCHHF-KLM 179

Query: 202 KVAGAYWRGDSNRP 215
           K AGAYWRGDSN  
Sbjct: 180 KTAGAYWRGDSNNK 193


>gi|13541912|ref|NP_111600.1| prolyl-tRNA synthetase [Thermoplasma volcanium GSS1]
 gi|74581167|sp|Q979Q5|SYP_THEVO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|14325343|dbj|BAB60247.1| tRNA synthetase Pro [Thermoplasma volcanium GSS1]
          Length = 462

 Score =  198 bits (503), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 85/433 (19%), Positives = 171/433 (39%), Gaps = 58/433 (13%)

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEE 293
           +   +E+    + ++    DL        G+  W   GWKI + + + +R  +    ++E
Sbjct: 1   MENKKENFSEWYNEIVTISDLSDKRYPIKGMNVWRPYGWKIMKLIDNIIRNAVDKHSFDE 60

Query: 294 INTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           +N P ++ + + + +  H   +   ++ V       K     AL+P +      +F+  +
Sbjct: 61  VNFPVLISRGMLEVEFEHIRGFENEIYWVTKGGKE-KLEEELALRPTSESAMYPMFSLWV 119

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
           +S+ +LP+++ +  SVYR E        +R+R     +AH      +   + +  + +I 
Sbjct: 120 RSHADLPLKIYQIVSVYRYETK-HTRSFIRIREIHFFEAHTAHESYEDAEKQMDEYRII- 177

Query: 413 SIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
                                       W +  + +       +    D+         G
Sbjct: 178 ----------------------------WTEIADALCLPFLYDQRPEWDKFP-------G 202

Query: 473 AFYGPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
           A Y   F+ ++    GR  Q GTI Q   N    ++  Y+       +   +H+  FG  
Sbjct: 203 AMYTIAFDTVMP--SGRSLQIGTIHQYGTNFSKNYDIKYLKEDGTFEY---VHQTTFGMS 257

Query: 532 ERFIGIMI----ENFKGNLPLWLSPIQAIVTTI-TSSAVEYAQEIANLLKSHHLSIETDF 586
           ER +  +I    ++    LP  ++PIQ ++  I       YA++I   L    +    D 
Sbjct: 258 ERLLAAIIGIHGDDKGLILPPAIAPIQVVIVPIPGEGVERYAKDIETTLNGIGIRCHVDN 317

Query: 587 RNE-TINYKIREHSIKKIPIIIICGDKEASERSIGI--RR-FGSTTTQKVSLLDAIP--- 639
           R+  T  YK  +  ++ +P+ I  G++E  E+++ +  R   G  T Q+  L+  +P   
Sbjct: 318 RDNYTPGYKYNDWEMRGVPLRIEVGERELKEKTVTLAARNIRGKKTVQREKLVYEVPDML 377

Query: 640 ILTKESLPPDCQK 652
            L KE +  D +K
Sbjct: 378 DLVKEKITEDAKK 390


>gi|110679326|ref|YP_682333.1| prolyl-tRNA synthetase [Roseobacter denitrificans OCh 114]
 gi|114152246|sp|Q168E6|SYP_ROSDO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|109455442|gb|ABG31647.1| prolyl-tRNA synthetase [Roseobacter denitrificans OCh 114]
          Length = 451

 Score =  198 bits (503), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 80/447 (17%), Positives = 157/447 (35%), Gaps = 40/447 (8%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           T+  +        E++   HR + R      I ++ +G+  W   G+K+ + L + +  +
Sbjct: 4   TRYFMPVLRENPAEAQIVSHRLMLRAGM---IKQNAAGIYSWLPLGFKVLRKLENIVHEE 60

Query: 287 -IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            I+  +  +  P +    LW++SG +D+Y   M  ++   D     R     P N     
Sbjct: 61  QIRAGHVPMLMPTMQSADLWRESGRYDAYGPEMLRIRDRQD-----RDMLFGPTNEEMIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNEC 404
            +F   + SY++LP+ L      +R+E      G+MR R F   D + F  TKE   +  
Sbjct: 116 DIFRSHVSSYKDLPLTLYHIQWKFRDEMRPRF-GVMRGREFFMKDGYNFDLTKEDALHAY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL-----WDDAENIMKGVLDTIKNSS 459
            +     +  Y+  G + I ++  + P     +          ++E      +  +    
Sbjct: 175 NRHLVSYLRTYERMGLQAIPMRADSGPIGGDDTHEFLVLADTGESEVFYDSAVTDLTFGD 234

Query: 460 QDRINT-------GVLLGEGAFYGPKFEYILKD-----AIGRDWQCGTI---QVDFNLPS 504
           +D I+        GV+      Y    E   +         R  Q   I   Q+ +    
Sbjct: 235 RD-IDYDSVEQCQGVMEEFTNLYARTDETHDQALFAAIPAERQRQARGIEVGQIFYFGTK 293

Query: 505 RFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGNLPLWL---SPIQAIVTT 559
             +A           P  +H    G  + R +G +IE +      +W    +P    +  
Sbjct: 294 YSDAMGAKVQGPDGKPTAVHMGSHGIGVSRLVGAIIEASHDEKGIIWPEGVTPFHCGIVN 353

Query: 560 ITS---SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASE 616
           +      A      +   L++  L    D R E    K     +  +P  I  G +    
Sbjct: 354 LKQGDTEADAACDALYASLRALGLDPLYDDRKERAGGKFATMDLIGLPWRITVGPRGLKN 413

Query: 617 RSIGIRRFGSTTTQKVSLLDAIPILTK 643
             + +    +  + ++   +AI  + K
Sbjct: 414 GVVELTSRKTGESSELPPEEAIEKIAK 440


>gi|121602198|ref|YP_989086.1| prolyl-tRNA synthetase [Bartonella bacilliformis KC583]
 gi|152112216|sp|A1USY3|SYP_BARBK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|120614375|gb|ABM44976.1| prolyl-tRNA synthetase [Bartonella bacilliformis KC583]
          Length = 441

 Score =  198 bits (503), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 89/447 (19%), Positives = 156/447 (34%), Gaps = 42/447 (9%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  L       +E+E   H  + R      I +  SG+  W   G K+   + + +R +
Sbjct: 4   SQYFLPILKENPKEAEIISHCLMLRAG---IIRQQTSGIYSWLPLGKKVLDKVCTIIREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +     EI+ P +    LW++SG +D Y   M  +K      +  R     P N     
Sbjct: 61  QERAGALEISMPTIQSADLWRESGRYDDYGLEMLRIKD-----RQERDLLYGPTNEEMVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +F   ++SY++LP+ L +    +R+E      G+MR R F   D + F    E      
Sbjct: 116 DIFRSYVRSYKDLPLNLYQIQWKFRDEIRPRF-GVMRSREFLMKDGYSFDLDYESAKTSY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            ++    +  +   G + I ++  T P     S      A+     V    +        
Sbjct: 175 NRMFIAYLRTFSRIGLKVIPMRADTGPIGGELSHEFIILAKTGESAVFCDKRFLEMTAPP 234

Query: 465 TGVLLGE-----------GAFYGPKFEYILKDAIG----------RDWQCGTIQV-DFNL 502
             V   +            A Y    E    +             R  + G I       
Sbjct: 235 VSVDFTDNVVLTDIVKQWTALYATTEEMHNAEEWAQICKSNQLSARGIEVGHIFYFGTKY 294

Query: 503 PSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNLPLWLSPIQA----IV 557
                A  +     K +PV +     G   R +   IE +   N  +W  PI      I+
Sbjct: 295 SEPMGAKVMGRDG-KEYPVFMGSYGIG-PSRLVAAAIEASHDENGIIWPKPITPFDFGII 352

Query: 558 TTITSSAVEY--AQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEAS 615
            T + +A  Y   + +   L +       D RNE    K     +  +P  II G K A+
Sbjct: 353 NTKSDNAKCYGMCETLYQGLVNAGFDPLLDDRNERPGAKFATMDLIGLPTQIIVGPKSAA 412

Query: 616 ERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +  + I+   + T + +++  A+  L+
Sbjct: 413 QDEVEIKDRKTGTKEVLTVEAALNRLS 439


>gi|42520651|ref|NP_966566.1| prolyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           melanogaster]
 gi|81831258|sp|Q73GW6|SYP_WOLPM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|42410390|gb|AAS14500.1| prolyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           melanogaster]
          Length = 422

 Score =  198 bits (502), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 88/436 (20%), Positives = 160/436 (36%), Gaps = 39/436 (8%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  L         ++   H+   R   +  IA   SG+  W   G  + + +   +R +
Sbjct: 4   SKYYLPTLKEKPAHAKIISHQYSLRAGLIKQIA---SGIYTWLPLGLLVLKNIEDIIRDE 60

Query: 287 IK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E   P V    LW++SG +D Y   M  +K      +        P +     
Sbjct: 61  MNKSGAIEALMPCVQPASLWRESGRYDDYGKEMLRIKD-----RHEEDMLFGPTHEEIAT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +    +KSY++LP+ L +    +R+E     +G+MR R F   DA+ F    E   N  
Sbjct: 116 DLIRDVVKSYKDLPLCLYQIQWKFRDEVRPR-YGVMRGREFLMKDAYSFDVDYEGALNSY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
             ++   I I+K  GF  I V   T P     S      A N  +  L    N   + + 
Sbjct: 175 NLMYKTYIKIFKRMGFTPIGVGADTGPIGGNLSHEFHILA-NTGESTL-YYDNKFSELLE 232

Query: 465 TGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK------- 517
           +  +    + Y       + D +     C   Q   N+       ++    +K       
Sbjct: 233 SEDIESLKSIYA------VADDMHDPETCPISQEQLNVSKGIEIGHIFYFGDKYSKPMKA 286

Query: 518 ------CHPVMIHRAVFGS-IERFIGIMIENFKGN----LPLWLSPIQAIVTTITSSAVE 566
                    V IH   +G  + R +G +IE F  +     P  ++P +  +  + +   E
Sbjct: 287 SVTSQDGKNVNIHMGSYGIGVSRLVGAIIEAFHDDKGIIWPEEVAPFRIGLINLQTKVTE 346

Query: 567 YAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS 626
            A +I   LKS    +  D    ++  K     +  +P  II G K  SE  + ++   +
Sbjct: 347 AADKIYKALKS--DEVLYDDTEGSVGVKFSRMDLIGLPWQIIVGKKAVSENIVEVKNRAT 404

Query: 627 TTTQKVSLLDAIPILT 642
              +++ + +AI   +
Sbjct: 405 GEVKEMQIEEAINHFS 420


>gi|254488857|ref|ZP_05102062.1| prolyl-tRNA synthetase [Roseobacter sp. GAI101]
 gi|214045726|gb|EEB86364.1| prolyl-tRNA synthetase [Roseobacter sp. GAI101]
          Length = 446

 Score =  198 bits (502), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 77/437 (17%), Positives = 149/437 (34%), Gaps = 38/437 (8%)

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEI 294
               E++   HR + R      I +  +G+  W   G+K+ + + + +  + +   +  +
Sbjct: 13  ENPSEAQIVSHRLMLRAGM---IKQSAAGIYSWLPLGFKVLRKIENIVHEEQQRAGHIPM 69

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
             P +    LW++SG +D+Y   M  +K   D     R     P N      +F   + S
Sbjct: 70  LMPTLQSADLWKESGRYDAYGPEMLRIKDRQD-----RDMLYGPTNEEMITDIFRSHVGS 124

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIIS 413
           Y++LP+ L      +R+E      G+MR R F   D + F  TKE   +   +     + 
Sbjct: 125 YKDLPLTLYHIQWKFRDEIRPRF-GVMRGREFLMKDGYNFDLTKEDALHAYNRHLVSYLR 183

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIK----NSSQDRINT---- 465
            Y+  G + I ++  + P     +      AE     V    +          I+     
Sbjct: 184 SYERMGLQAIPMRADSGPIGGDDTHEFLVLAETGESEVFYDSQITELKFGDREIDYDSVD 243

Query: 466 ---GVLLGEGAFYGPKFEYILKD-----AIGRDWQCGTI---QVDFNLPSRFNAFYVNSH 514
               VL    + Y    E             R      I   Q+ +              
Sbjct: 244 QCQAVLEEFTSRYARTDETHDAALFSEVPQDRQRTARGIEVGQIFYFGTKYSEPMGATVQ 303

Query: 515 SEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGNLPLWL---SPIQAIVTTI---TSSAVE 566
                P  +H    G  + R +G +IE +      +W    +P    +  +      A  
Sbjct: 304 GPDGKPTPVHMGSHGIGVSRLLGAIIEASHDDKGIIWPEGVTPFHVGIVNLKQGDEEADS 363

Query: 567 YAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS 626
             Q + + + +  L    D RNE    K     +  +P  I  G +      + +    +
Sbjct: 364 ACQALYDSITALGLEPLYDDRNERAGGKFATMDLIGLPWRITVGPRGLKNGVVELTSRRT 423

Query: 627 TTTQKVSLLDAIPILTK 643
             +++++  DA+  + +
Sbjct: 424 GESEEMAPEDAVQKIAE 440


>gi|20092682|ref|NP_618757.1| prolyl-tRNA synthetase [Methanosarcina acetivorans C2A]
 gi|74580394|sp|Q8TJA2|SYP_METAC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|19917968|gb|AAM07237.1| prolyl-tRNA synthetase [Methanosarcina acetivorans C2A]
          Length = 480

 Score =  198 bits (502), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 67/413 (16%), Positives = 153/413 (37%), Gaps = 60/413 (14%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           +E     + +L    ++  +     G+  W+  G+ I ++  + +R  + +  ++E   P
Sbjct: 13  KEEFSDWYNELLWMAEIMDVRYPVKGLYVWYPFGFAIRRSTYNIIREILDNSGHQETLFP 72

Query: 298 QVLDQ-HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
            ++ +    +++ H   +   ++ V        D+   AL+P +      ++   ++S+ 
Sbjct: 73  LLIPENEFMKEAEHIKGFENEVYWVTHGGKDSLDI-PLALRPTSETAIYPMYKMWVRSHA 131

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT-QDDAHVFC-TKEQMFNECLKIHNLIISI 414
           + P++L +  + +R E       L+R+R  T   +AH    T E    +  +   L   I
Sbjct: 132 DFPIKLYQIVNTFRYETK-HTRPLIRLREITSFKEAHTVHATWEDAEAQVKEAVELYTEI 190

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           Y+      +  +              WD                             GA 
Sbjct: 191 YRRLAVPVLRSRRPD-----------WDKF--------------------------PGAD 213

Query: 475 YGPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           Y    + ++ D  GR  Q GT+  +  N    F+  Y     E+ +    H+  +G  ER
Sbjct: 214 YTDAIDAMMPD--GRTLQIGTVHHLGDNFAKTFDIKYEAPDGEQRYA---HQTCYGISER 268

Query: 534 FIGIMI----ENFKGNLPLWLSPIQAIVTTIT-----SSAVEYAQEIANLLKSHHLSIET 584
            I   I    ++    LP  ++P+Q ++  I         +   +++   LK   + +E 
Sbjct: 269 SIAATISIHGDDKGLVLPPEIAPVQVVIIPIIFKKGAEEVLAACRDVQERLKKTGVKVEI 328

Query: 585 DFRNETINYKIREHSIKKIPIIIICGDKEASER-SIGIRRFGSTTTQKVSLLD 636
           D  +     K     +K +P+ +  G ++     ++ +R   +   +++ L +
Sbjct: 329 DASDLRPGAKYYRWEMKGVPLRLEIGPRDLENNVAVSVR-RDTGEKEQIPLPE 380


>gi|242398996|ref|YP_002994420.1| Prolyl-tRNA synthetase [Thermococcus sibiricus MM 739]
 gi|242265389|gb|ACS90071.1| Prolyl-tRNA synthetase [Thermococcus sibiricus MM 739]
          Length = 488

 Score =  197 bits (501), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 79/431 (18%), Positives = 160/431 (37%), Gaps = 55/431 (12%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
           N  +                + ++    ++        G+  W   G +I + + + +  
Sbjct: 3   NVNKVTEVKRERWMNEFSEWYNEMIELAEIQDKRYPVKGMNVWLPYGLRIMRNIENLIHM 62

Query: 286 KIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPG 343
           ++    + E+  P ++ +  ++ ++ H   +   +  V  A +   D++   L+P +   
Sbjct: 63  EMVRTGHNEVLFPALIPESEFEREAEHIAGFHGEVLWVTHAGERPLDVK-LILRPTSETA 121

Query: 344 HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT-QDDAHVFCTKEQMFN 402
              +FN  ++S+ +LP ++ +  +VYR E       L+RVR  +   ++H   T    F 
Sbjct: 122 MYPMFNLWIRSHADLPFKIYQIVNVYRYETK-HTRPLIRVREISRFFESH---TAHDSFE 177

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
           +  +     + I+ +      +  + ++          WD                    
Sbjct: 178 DAERQIREDLEIFDNLAKNLALPYIVSKRPD-------WDKF------------------ 212

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
                    GAFY    E I+ D  GR  Q GT+       ++  A+ +   +E+     
Sbjct: 213 --------PGAFYSLGAEVIMPD--GRTLQIGTMHHYKQNFAK--AYEITYETEEGTHEY 260

Query: 523 IHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITS-----SAVEYAQEIAN 573
           +H+  FG  ER +  ++    ++    LP  ++P+Q +V  I           YA+EIA 
Sbjct: 261 VHQTTFGMSERLVAAIMGVHGDDSGLVLPPTIAPVQVVVIPIPMKESPYDVNAYAKEIAE 320

Query: 574 LLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
            LK+  L I  D R +     K  +  IK +P+ I  G K+  E      R  +     V
Sbjct: 321 ELKTAGLRIHVDDREDVRPGRKFYDWEIKGVPLRIEVGPKDVEENQAVFARRDTFEKFTV 380

Query: 633 SLLDAIPILTK 643
              + +    K
Sbjct: 381 KRENLVEEARK 391


>gi|159042526|ref|YP_001541778.1| prolyl-tRNA synthetase [Caldivirga maquilingensis IC-167]
 gi|259511577|sp|A8MC04|SYP_CALMQ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|157921361|gb|ABW02788.1| prolyl-tRNA synthetase [Caldivirga maquilingensis IC-167]
          Length = 481

 Score =  197 bits (500), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 79/426 (18%), Positives = 162/426 (38%), Gaps = 64/426 (15%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
               K+  + +++       G   W   G  I + + + +RR   +  ++E+  P  +  
Sbjct: 18  EWFNKVIMDAEVYDYRYPVKGAYIWRPYGVAIRRNVEALIRRLHDETGHQEVLFPVFIPY 77

Query: 303 HLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             + ++S H   + + +F V              L+P +    + +F   ++ + +LP+R
Sbjct: 78  EFFSKESEHIRGFESEVFWV---SKGTGGEERLVLRPTSETAMMPMFKLWIRDHTDLPLR 134

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQD-DAHVFCTK-EQMFNECLKIHNLIISIYKDFG 419
           + +  SV+R E     H ++R+R  +   +AH      +    +  +   +   I  +  
Sbjct: 135 VYQIVSVFRAETK-MTHPMIRLREISMFKEAHTAHADRDDAERQVKEAVGIYRRIMDELC 193

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
              ++ +              WD                             GA Y   F
Sbjct: 194 IPYLISRRPD-----------WDKF--------------------------AGAVYTIAF 216

Query: 480 EYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           + I+ D  GR  Q GT+     N    F+  Y+    +  +   IH   +G  ER I  M
Sbjct: 217 DTIMPD--GRTMQIGTVHYLGENFSRVFDVKYLGKDGQMHY---IHTTSYGISERIIASM 271

Query: 539 I----ENFKGNLPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDF-RNE 589
           I    ++    LP   +PIQ +V  I      S + YA+ ++  L +  + +  D  R++
Sbjct: 272 IAVNGDDRGLLLPPRYAPIQVVVIPIMYGEDQSVLNYAKGVSGELLNAGVRVHVDDRRDK 331

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS---LLDAIPILTKESL 646
           T  +K     +K +PI +  G  +  + ++ + R  +     V    ++DA+  L K ++
Sbjct: 332 TPGWKYYHWELKGVPIRLEVGPSDVKDNAVTLTRRDTFEKYAVERSNVVDAVRELMK-AI 390

Query: 647 PPDCQK 652
             + +K
Sbjct: 391 EDNMRK 396


>gi|182678768|ref|YP_001832914.1| prolyl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC
           9039]
 gi|226699120|sp|B2IDI9|SYP_BEII9 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|182634651|gb|ACB95425.1| prolyl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC
           9039]
          Length = 439

 Score =  197 bits (500), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 84/437 (19%), Positives = 158/437 (36%), Gaps = 39/437 (8%)

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEE 293
               +E+E   HR + R   +    ++ +G+  W   G+++ Q +   +R ++      E
Sbjct: 12  RENPKEAEIVSHRLMLRAGMIR---QEAAGIYAWLPLGFRVLQKVEQIVREEMDRAGAIE 68

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           +  P +    LW+++G +D+Y   M  +K      +  R     P N      +F   ++
Sbjct: 69  LLMPTLQLADLWRETGRYDAYGPEMLRIKD-----RHERELLYGPTNEDMITEIFRAYVR 123

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLII 412
           SYR+LP  L      +R+E      G+MR R F   DA+ F   E+       K+    +
Sbjct: 124 SYRDLPKILYHIQWKFRDEQRPRF-GVMRGREFLMKDAYSFDLDEEGARLSYNKMFVAYL 182

Query: 413 SIYKDFGFEKIMVKLSTRPEKRVGSDAL------WDDAENIMKGVLDT---IKNSSQDRI 463
            IYK  G   I ++  T P     S          + A    K VLD     +++  D  
Sbjct: 183 RIYKRMGLTAIPMRAETGPIGGDLSHEFIILADTGESAVFCNKDVLDLPIPDEHTDYDGD 242

Query: 464 NTGVLLGEGAFYGPKFEYILKDAI-----------GRDWQCGTIQVDFNLPSRFNAFYVN 512
            + ++    + Y    +                   R  + G +       S+     + 
Sbjct: 243 LSPIIKQWTSLYAATEDVHDAARFESETPPEKRIERRGIEVGQVFYFGEKYSKPMRSLIT 302

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIV--TTITSSAVE 566
                  P        G   R +G +IE          P  ++P    +    +  +A +
Sbjct: 303 GPDGSEKPFQGGSYGVGVS-RLVGAIIEASHDEAGIIWPEAVAPFTVGLANLKVGDAATD 361

Query: 567 YA-QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
            A  EI   L++  + +  D  ++    K  +  +  +P  II G K  +E  I ++   
Sbjct: 362 AACAEIYERLEALGVDVLYDDTDDRPGGKFAKLDLIGLPYQIIVGPKGLAEGKIEMKTRA 421

Query: 626 STTTQKVSLLDAIPILT 642
           +   + +S+   I   T
Sbjct: 422 TGARENLSIAAVIERFT 438


>gi|319783000|ref|YP_004142476.1| prolyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317168888|gb|ADV12426.1| prolyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 442

 Score =  197 bits (500), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 74/434 (17%), Positives = 138/434 (31%), Gaps = 44/434 (10%)

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEI 294
               E+E   HR + R   +    + G G   W   G ++   +   +R +       EI
Sbjct: 13  ENPREAEIVSHRLMLRAGMIR---QQGQGSFSWLPLGKRVLDKVCRIIREEQDRAGALEI 69

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
             P +    LW++SG +D Y   M  +K   D     R     P N      +    +KS
Sbjct: 70  LMPTIQSADLWRESGRYDDYGKEMLRIKDRQD-----RDMLYGPTNEEVVTEIVRAYVKS 124

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIIS 413
           Y++LP+ L      +R+E      G+MR R F   DA+ F    E       ++    + 
Sbjct: 125 YKDLPLNLYHIQWKFRDEVRPRF-GVMRSREFLMKDAYSFDLDFEGARAAYNRMFVSYLR 183

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKG--------VLDTIKNSSQDRINT 465
            +   G + I ++  T P     S      A+              LD    ++    + 
Sbjct: 184 TFTRMGLQAIPMRADTGPIGGDLSHEFIILADTGESQVYCHRDYLALDVPGANTDFANDA 243

Query: 466 GVLLGEGAF---YGPKFEYILKDAI----------GRDWQCGTI-QVDFNLPSRFNAFYV 511
            +      +   Y    E   + A            R  + G I            A   
Sbjct: 244 EIADIVKTWTTPYAATDEMHDEAAWEKIGESDKVSARGIEVGHIFHFGDKYSKPMGAKVT 303

Query: 512 NSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN----LPLWLSPIQAIVTTITSSAVE 566
               +      +    +G    R +  +IE    +     P  ++P    +  + +   E
Sbjct: 304 GPDGKDH---FVSGGSYGIGPSRLVAAIIEASHDDNGIIWPEAVAPFDIGLINMKAGDAE 360

Query: 567 Y---AQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRR 623
                 E+     +    +  D  ++    K     +  +P  +I G +  +   I I+ 
Sbjct: 361 CDGVCDELHAAFVAAGKDVLYDDTDQRPGGKFATADLIGLPWQVIVGPRGVAAGEIEIKN 420

Query: 624 FGSTTTQKVSLLDA 637
             +   + + + DA
Sbjct: 421 RKTGERETLPIADA 434


>gi|73667729|ref|YP_303744.1| prolyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro]
 gi|114152210|sp|Q46G28|SYP_METBF RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|72394891|gb|AAZ69164.1| prolyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro]
          Length = 480

 Score =  197 bits (500), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 67/413 (16%), Positives = 153/413 (37%), Gaps = 60/413 (14%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           +E     + +L    ++  +     G+  W+  G+ I +   + +R  + +  ++E   P
Sbjct: 13  KEEFSEWYNELLWMAEIMDVRYPVKGLYVWYPFGFAIRRNTYNIIREILDNSGHQEALFP 72

Query: 298 QVLDQ-HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
            ++ +    +++ H   +   ++ V        D+   AL+P +      ++   ++S+ 
Sbjct: 73  LLIPENEFMKEAEHIKGFEDEVYWVTHGGRDTLDI-PLALRPTSETAIYPMYKMWVRSHA 131

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT-QDDAHVFC-TKEQMFNECLKIHNLIISI 414
           + P+++ +  + +R E       L+R+R  T   +AH    T E    +  +   L   I
Sbjct: 132 DFPIKIYQIVNTFRYETK-HTRPLIRLREITSFKEAHTVHATWEDAEAQVKEAIGLYTEI 190

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           Y+  G   +  +              WD                             GA 
Sbjct: 191 YRRLGVPVLRSRRPD-----------WDKF--------------------------PGAD 213

Query: 475 YGPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           Y    + I+ D  GR  Q GT   +  N    F+  Y     E+ +    ++  +G  ER
Sbjct: 214 YTDALDAIMPD--GRTLQIGTAHHLGDNFAKTFDIKYETPDGEQRYA---YQTCYGISER 268

Query: 534 FIGIMI----ENFKGNLPLWLSPIQAIVTTIT-----SSAVEYAQEIANLLKSHHLSIET 584
            I   I    ++    LP  ++P+Q ++  I         +   +++   L    + +E 
Sbjct: 269 SIAATISIHGDDKGLVLPPEIAPVQVVIIPIIFKKGAEEVLAACKDVKERLTKAGIRVEI 328

Query: 585 DFRNETINYKIREHSIKKIPIIIICGDKEASER-SIGIRRFGSTTTQKVSLLD 636
           D  +     K  +  +K +P+ +  G ++     ++ +R   +   +++SL +
Sbjct: 329 DASDLRPGAKYYKWEMKGVPLRLEIGPRDLQNNVAVAVR-RDTGEKEQISLPE 380


>gi|116754929|ref|YP_844047.1| prolyl-tRNA synthetase [Methanosaeta thermophila PT]
 gi|121694244|sp|A0B9N3|SYP_METTP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|116666380|gb|ABK15407.1| prolyl-tRNA synthetase [Methanosaeta thermophila PT]
          Length = 478

 Score =  196 bits (497), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 72/432 (16%), Positives = 161/432 (37%), Gaps = 58/432 (13%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           T++E        + +    + +L R  ++  +     G+  W+  G+ +   +   ++  
Sbjct: 2   TKKEERDAKLPPKSNFSEWYHELLRSAEIVDVRYPVKGMSVWYPFGFALRSHVYQIIKEL 61

Query: 287 IKDDYEEINTPQVLDQ-HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +  D+ E   P ++ +    +++ H   +   ++ V        D++  AL+P +     
Sbjct: 62  LDVDHYETQFPLLIPETEFMKEAEHIKGFEDEVYWVTHGGRDPLDIK-LALRPTSETAIY 120

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT-QDDAHV-FCTKEQMFNE 403
            +    ++S+ +LP+R+ +  + +R E       L+R+R  T   +AH    T E+   +
Sbjct: 121 PMLKLWIRSHADLPLRIYQIVNTFRYETK-HTRPLIRLREITSFKEAHTAHATWEEAAMQ 179

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
                   I  Y+      ++ K  +           WD                     
Sbjct: 180 VEIAIQRYIEFYRRLAIPCLVSKRPS-----------WDKF------------------- 209

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVM 522
                   GA Y    + I+ D  GR  Q GT   +  N    +   Y + H E+ +   
Sbjct: 210 -------PGADYSIALDVIMPD--GRTLQVGTAHLLGTNFAKTYEITYEDEHGEQRY--- 257

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWL----SPIQAIVTTIT----SSAVEYAQEIANL 574
           +++  +G  ER I  +I     +  L L    +P+Q ++  I        +E  + IA+ 
Sbjct: 258 VNQTCYGISERCIAALIAVHGDDKGLVLPWRVAPVQVVIVPIIFGEREPIIEVCRSIAST 317

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           L   ++ +  D  +E    K  +  ++ +P+ I  G ++     + I R      + + +
Sbjct: 318 LAGRNIRVRLDDGDERPGAKFYKWEMRGVPVRIEIGPRDIKNGVVTIVRRDG-VRKTLPM 376

Query: 635 LD-AIPILTKES 645
            +  +  +  E+
Sbjct: 377 DERLVDAILIEA 388


>gi|260575893|ref|ZP_05843888.1| prolyl-tRNA synthetase [Rhodobacter sp. SW2]
 gi|259021819|gb|EEW25120.1| prolyl-tRNA synthetase [Rhodobacter sp. SW2]
          Length = 445

 Score =  196 bits (497), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 78/449 (17%), Positives = 159/449 (35%), Gaps = 43/449 (9%)

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLF--HIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
             LT+Y   + +    + + ++    L    I +  +G+  W   G+K+ + +   +  +
Sbjct: 1   MRLTRYFLPVLKENPAEAQIVSHRYMLRAGMIKQQAAGIYSWLPLGFKVLRRIEQIVHEE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +   +  +  P +    LW++SG +D Y   M  +     T +  R     P N     
Sbjct: 61  QQRAGHIPLLMPTLQPADLWRESGRYDDYGEEMLRI-----TDRQKRELLYGPTNEEMIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNEC 404
            +F   + SY++LP+ L      +R+E      G+MR R F   D + F  TKE   +  
Sbjct: 116 DIFRSHVTSYKDLPLTLYHIQWKFRDEMRPRF-GVMRGREFLMKDGYNFDLTKEDALHAY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL-----WDDAENIMKGVLDTIKNSS 459
            +     +  Y+  G + I ++  + P     +          ++E      +  I+  +
Sbjct: 175 NRHLVSYLRTYERMGLQAIPMRADSGPIGGDDTHEFLVLAATGESEVFYDSAVTDIRLGA 234

Query: 460 QDRINT-------GVLLGEGAFYGPKFEYILKDAIG----------RDWQCGTIQV-DFN 501
           ++ I+         V+    + Y    E   +              R  + G I      
Sbjct: 235 RE-IDYDDKAQCAAVMQEFTSLYARTDETHDESLFNAIPEERRRSARGIEVGQIFFFGTK 293

Query: 502 LPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNLPLWL---SPIQAIV 557
                 A  V     +  PV +     G   R +G +IE +      +W    +P    +
Sbjct: 294 YSEAMGATVVTPDGSRV-PVQMGSHGIGVS-RLLGAIIEASHDDKGIIWPEGVTPFHVGI 351

Query: 558 TTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
             +    +      + I   LK+  L    D R+E    K     +  +P  I  G +  
Sbjct: 352 VNLKQGDNGTDAACEAIYKALKARGLDPLYDDRDERAGAKFATMDLIGLPWRITVGPRGL 411

Query: 615 SERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +   + +    S  ++++S  DA+  + +
Sbjct: 412 ANGKVELTSRRSGVSEEMSAEDAVARVVE 440


>gi|282164523|ref|YP_003356908.1| prolyl-tRNA synthetase [Methanocella paludicola SANAE]
 gi|282156837|dbj|BAI61925.1| prolyl-tRNA synthetase [Methanocella paludicola SANAE]
          Length = 474

 Score =  196 bits (497), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 68/420 (16%), Positives = 156/420 (37%), Gaps = 58/420 (13%)

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK 288
            E        +++    + +L     +  +     G+  W+  G+ I + + + +R  + 
Sbjct: 1   MEEESKSLPPKDNFSEWYNELLMMAQVMDVRYPIKGIYVWYPFGFSIRKKVYNMLRALMD 60

Query: 289 DDYEEINTPQVLDQ-HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
            D++E   P ++ +  L ++S H   +   ++ V     +  ++   AL+P +      +
Sbjct: 61  VDHQECYFPMLIPKPELLKESEHIKGFEDEVYWVTHGGLSPLEI-PLALRPTSETAIYPM 119

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT-QDDAHV-FCTKEQMFNECL 405
           +   ++S+ +LP++L +  + +R E       L+R+R  T   +AH    T E    +  
Sbjct: 120 YKLWIRSHADLPLKLYQIVNTFRYETK-QTRPLIRLREITSFKEAHTAHATWEDAEKQVH 178

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
           +  +L    +       ++ K              WD                       
Sbjct: 179 EAMDLYSDFFTKLSVPFVINKRPD-----------WDKF--------------------- 206

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIH 524
                 GA Y   F+ ++ +  GR  Q GT+  +       ++  Y +   E+ +   ++
Sbjct: 207 -----PGADYTMAFDTLMPN--GRSLQIGTVHHLGTKFAKTYDITYEDDKGERQY---VN 256

Query: 525 RAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI-----TSSAVEYAQEIANLL 575
           +  +G  ER I  +I    +N    LP   +P Q ++  I         ++  +++  +L
Sbjct: 257 QTCYGISERCIAAVIGIHGDNKGLVLPPNAAPTQVVIIPIVFKSGGEEVLDVCRKVKAIL 316

Query: 576 KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
               ++   D  NE    K  +  +K +P  I  G ++    ++ + R      Q + + 
Sbjct: 317 NDSGITAVLDDTNERPGAKYYKWEMKGVPFRIEIGPRDIKNNAVMLVRRDG-VKQSIPMD 375


>gi|238650930|ref|YP_002916786.1| prolyl-tRNA synthetase [Rickettsia peacockii str. Rustic]
 gi|259511617|sp|C4K2D7|SYP_RICPU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|238625028|gb|ACR47734.1| prolyl-tRNA synthetase [Rickettsia peacockii str. Rustic]
          Length = 426

 Score =  196 bits (497), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 84/433 (19%), Positives = 157/433 (36%), Gaps = 28/433 (6%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  L        E++   H+ + R   +    +  +G+  W   G K+ + + + +R  
Sbjct: 4   SKYFLPVLKEEPSEAQVTSHKLMLRSGMIR---QQAAGIYTWLPLGLKVLKNIENIVRLN 60

Query: 287 IK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P +   HLW +SG +D+Y   M   +   D           P N     
Sbjct: 61  MNKAGALEVLMPCIQPAHLWMESGRFDNYGKEMLKFQDRHDNT-----LLFGPTNEDMIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +F H +KSY++LP  L      +R+E      G+MR R F   DA+ F   E+   +  
Sbjct: 116 DIFRHNIKSYKDLPKNLYHIQWKFRDEIRPRF-GVMRGREFLMKDAYSFDINEENAVKTY 174

Query: 406 -KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV--------LDTIK 456
            +++   I+ ++D G   I V     P     S      AE     +        L    
Sbjct: 175 NQMYKAYINAFRDLGVFAIPVIADNGPIGGNLSHEFHIIAETGESTIYYDKKFKTLKDNP 234

Query: 457 NSSQDRINTGVLLGEGAFYGPKFEYILKD-AIGRDWQCGTIQVDFNLPSRFNAFYVNSHS 515
           +   + I +     E  +   K     ++    +  + G I    +  S      +N   
Sbjct: 235 DIDVEEIKSWYAAAEEKYEVNKLPISEQEITSSKGIEVGHIFYIGSKYSVNMNALINDEY 294

Query: 516 EKCHPVMIHRAVFGSIERFIGIMIE-NFKGNLPLWL---SPIQAIVTTIT---SSAVEYA 568
            K  P+ +     G I R +  +IE N      +W    +P +  +  +    S  VE A
Sbjct: 295 GKLTPIEMSSYGIG-ISRLVAAIIEANCDEKGIIWPSSVAPFKVSLINLNIHDSKCVELA 353

Query: 569 QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
           +     L   ++ +  D        K   H +   P  II G K+A+   + ++   S  
Sbjct: 354 EMAYKELSDKNIEVLYDDTEARPGSKFATHDLIGSPHQIIIGPKKAANNIVALKDRKSGV 413

Query: 629 TQKVSLLDAIPIL 641
            + + +   + +L
Sbjct: 414 IEDIEVGSLMSVL 426


>gi|114707388|ref|ZP_01440285.1| prolyl-tRNA synthetase [Fulvimarina pelagi HTCC2506]
 gi|114537269|gb|EAU40396.1| prolyl-tRNA synthetase [Fulvimarina pelagi HTCC2506]
          Length = 440

 Score =  196 bits (497), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 73/435 (16%), Positives = 138/435 (31%), Gaps = 42/435 (9%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
            E+E   H+ + R   +    +  +G+  +   G K+   + + +R +       E+  P
Sbjct: 16  REAEIVSHQLMLRAGMIR---QQAAGLYTFLPLGLKVLNKVCAIIREEQNRAGANELLMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW++SG +D+Y   M  +     T +  R     P N      +F   ++SYR 
Sbjct: 73  TIQSADLWRESGRYDAYGEEMLRI-----TDRHKRDLLYGPTNEEMVTDIFRSYVRSYRS 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYK 416
           LP+ L      +R+E      G+MR R F   DA+ F    E       ++    +  + 
Sbjct: 128 LPLNLYHIQWKFRDEVRPRF-GVMRGREFLMKDAYSFDLDFESAQTAYHRMFVSYLRTFD 186

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG---- 472
             G + I ++  T P     S      A      V         +  +  +   +     
Sbjct: 187 RCGLQAIPMRADTGPIGGNLSHEFIILASTGESEVFCHRDYLGMEIPSEAIDFDDAGQLA 246

Query: 473 -------AFYGPKFEYILKDAIG----------RDWQCGTIQVDFNLPSRFNAFYVNSHS 515
                    Y    E   + A            R  + G I           A       
Sbjct: 247 SIVEKWTTPYAATDEMHDETAWNTVPANHQLNARGIEVGHIFYFG--TKYSAAMNAAVTG 304

Query: 516 EKCHPVMIHRAVFGS-IERFIGIMIENFKGN----LPLWLSPIQAIVTTITSSAVEY--- 567
                V +H   +G    R +   IE F        P  ++P    +  +     E    
Sbjct: 305 PDGKDVPVHMGSYGIGPSRLVAAAIEAFHDEAGIIWPRSIAPFDVGLINMKPGDAECDAA 364

Query: 568 AQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGST 627
            ++I   +K   + +  D +      K     +  +P  +I G + A      ++   S 
Sbjct: 365 CEKIYEEMKQAGIDVLYDDQEGRAGGKFATMDLIGLPTQVIIGPRGAKSGEAEVKDRASG 424

Query: 628 TTQKVSLLDAIPILT 642
             + + +   I  + 
Sbjct: 425 ARETIPMDQVIAKVK 439


>gi|51473574|ref|YP_067331.1| prolyl-tRNA synthetase [Rickettsia typhi str. Wilmington]
 gi|81826313|sp|Q68WZ3|SYP_RICTY RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|51459886|gb|AAU03849.1| Proline translase [Rickettsia typhi str. Wilmington]
          Length = 428

 Score =  196 bits (497), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 80/433 (18%), Positives = 151/433 (34%), Gaps = 26/433 (6%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  L        E++   H+ + R   +    +  SG+  W   G K+ + + + +R  
Sbjct: 4   SKYFLPILKEEPSEAQVISHKLMLRSGMIM---KQASGLYTWLPLGLKVLKNIENIVRSN 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P +   HLW +SG ++ Y   M   +   D           P N     
Sbjct: 61  MNKVGALEVLMPCIQPAHLWIESGRFEYYGKEMLKFQDRHDNT-----LLFGPTNEDMIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNEC 404
            +F   +KSY++LP  L      +R+E      G+MR R F   DA+ F   +E   N  
Sbjct: 116 DIFRRNIKSYKDLPKNLYHIQWKFRDEIRPRF-GVMRGREFLMKDAYSFDINQENAVNTY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE--------NIMKGVLDTIK 456
            K++   I+ ++D G   I V     P     S      AE        +    +L    
Sbjct: 175 NKMYKAYINTFRDLGVFAIPVIADNGPIGGNLSHEFHIIAETGESTIYYDKRFKILKDNP 234

Query: 457 NSSQDRINTGVLLGEGAFYGPKFE-YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS 515
           +   + I +     E      K   +       +  + G I    +  S      +N   
Sbjct: 235 DIDVEEIKSWYAAAEEKHDVNKLSSFPEGITSSKGIEVGHIFYIGSKYSVNMNALINDEY 294

Query: 516 EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL---SPIQAIVTTIT---SSAVEYAQ 569
            K  PV +     G       I+  N      +W    +P +  +  +    +  VE A 
Sbjct: 295 GKLIPVEMSSYGIGISRLAAAIIEANCDKKGIIWPFSVAPFKVSLINLNIHDNKCVELAA 354

Query: 570 EIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           +    L + ++ +  D        K   H +   P  +I G K+A+   + ++   +   
Sbjct: 355 KTDKELSNKNIEVLYDDTEARPGSKFATHDLIGSPYQVIIGPKKAANNIVELKDRKTGVL 414

Query: 630 QKVSLLDAIPILT 642
           + + + + I  + 
Sbjct: 415 EDIEIENLINYIR 427


>gi|56696018|ref|YP_166372.1| prolyl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
 gi|81820109|sp|Q5LUD3|SYP_SILPO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|56677755|gb|AAV94421.1| prolyl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
          Length = 464

 Score =  196 bits (497), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 80/437 (18%), Positives = 148/437 (33%), Gaps = 38/437 (8%)

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEI 294
               E++   HR + R   +        G+  W   G+K+ + L + +  + I+  +  +
Sbjct: 13  ENPAEAQIVSHRLMLRAGMIKQAQA---GIYSWLPLGFKVLRKLENIVHEEQIRAGHIPM 69

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
             P +    LW++SG +D Y   M  +     T +  R     P N      +F   + S
Sbjct: 70  LMPTLQSADLWRESGRYDDYGQEMLRI-----TDRHGRDMLFGPTNEELITDIFRGHVSS 124

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIIS 413
           Y++LP+ L      +R+E      G+MR R F   D + F  TKE   +   +     I 
Sbjct: 125 YKDLPLTLYHIQWKFRDEIRPRF-GVMRGREFLMKDGYNFDLTKEDALHAYNRHLVSYIR 183

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNS----SQDRINT---- 465
            Y+  G + I ++  + P     +      AE     V    K +     +  I+     
Sbjct: 184 TYERMGLQAIPMRADSGPIGGDDTHEFLVLAETGESEVFYDSKVTDIRLGEREIDYDSVD 243

Query: 466 ---GVLLGEGAFYGPKFEYILKDAIG-----RDWQCGTI---QVDFNLPSRFNAFYVNSH 514
               V+    + Y    E   +         R      I   Q+ +              
Sbjct: 244 QCRAVMEEFTSLYARTDETHDEAVFNQIPEERRRSARGIEVGQIFYFGTKYSEPMGATVQ 303

Query: 515 SEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGNLPLWL---SPIQAIVTTITS---SAVE 566
                PV +H    G  + R IG +IE +      +W    +P    +  +      A  
Sbjct: 304 GPDGKPVPVHMGSHGIGVSRLIGAIIEASHDDKGIIWPEGVTPFHCGIVNLKQGDGEADA 363

Query: 567 YAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS 626
              ++   L +  L    D RNE    K     +  +P  I  G +      + +    +
Sbjct: 364 ACDQLYAALSAIGLEPLYDDRNERAGGKFATMDLIGLPWRITVGPRGLKNGVVELTSRKT 423

Query: 627 TTTQKVSLLDAIPILTK 643
             + ++S  +A+  +  
Sbjct: 424 GESVELSPEEAVKKVAD 440


>gi|15604249|ref|NP_220765.1| prolyl-tRNA synthetase [Rickettsia prowazekii str. Madrid E]
 gi|6226191|sp|Q9ZDE7|SYP_RICPR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|3860941|emb|CAA14841.1| PROLYL-TRNA SYNTHETASE (proS) [Rickettsia prowazekii]
 gi|292571991|gb|ADE29906.1| Prolyl-tRNA synthetase [Rickettsia prowazekii Rp22]
          Length = 432

 Score =  196 bits (497), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 77/434 (17%), Positives = 149/434 (34%), Gaps = 26/434 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  L        E++   H+ + R   +    +  +G+  W   G K+ + + + +R  
Sbjct: 4   SKYFLPILKEEPSEAKVISHKLMLRSGMIM---KQAAGLYTWLPLGLKVLKNIENVVRSN 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P +   HLW +SG ++ Y   M   +   D           P N     
Sbjct: 61  MNKVGALEVLMPCIQPAHLWIESGRFEHYGKEMLKFQDRHDNT-----LLFGPTNEDMIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +F   +KSY++LP  L      +R+E      G+MR R F   DA+ F   ++      
Sbjct: 116 DIFRRNIKSYKDLPKNLYHIQWKFRDEIRPRF-GVMRGREFLMKDAYSFDINQKNAVNTY 174

Query: 406 -KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE--------NIMKGVLDTIK 456
            K++   ++ ++D G   I V     P     S      AE        +    +L    
Sbjct: 175 NKMYKAYMNTFRDLGVFAIPVIADNGPIGGNLSHEFHIVAETGESTIYYDKRFKILKDNP 234

Query: 457 NSSQDRINTGVLLGEGAFYGPKFE-YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS 515
           +   + I       E      K   +       +  + G I    +  S      +N   
Sbjct: 235 DIDVEEIKGWYAAAEEKHDVNKLSSFPEGITRSKGIEVGHIFYIGSKYSVNMNALINDEY 294

Query: 516 EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL---SPIQAIVTTIT---SSAVEYAQ 569
            K  PV +     G       I+  N      +W    +P +  +  +    +  VE A 
Sbjct: 295 GKLIPVEMSSYGIGISRLAAAIIEANCDKKGIIWPCSVAPFKVSLINLNIHDNKCVELAA 354

Query: 570 EIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           +    L   ++ +  D  +     K   H +   P  II G K+A+   + ++   +   
Sbjct: 355 KTDKELSHQNIEVLYDDTDARPGSKFATHDLIGSPYQIIIGPKKAANNIVELKDRKTGVL 414

Query: 630 QKVSLLDAIPILTK 643
           + + + + I  +  
Sbjct: 415 EDIEVENIINYIKN 428


>gi|226320444|ref|ZP_03796010.1| threonyl-tRNA synthetase [Borrelia burgdorferi 29805]
 gi|226234086|gb|EEH32801.1| threonyl-tRNA synthetase [Borrelia burgdorferi 29805]
          Length = 263

 Score =  195 bits (496), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 114/260 (43%), Positives = 167/260 (64%), Gaps = 5/260 (1%)

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
             +    L   RHS AH+MAEAV  ++P  ++AIGP I+DGFYYDF+ ++  + D L  I
Sbjct: 4   DLDKEDILYKKRHSIAHVMAEAVLDLFPNTKIAIGPPIKDGFYYDFEFKKQITEDSLLDI 63

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E +M+EI+   S F K+ +S E+A E+F+   E YK++++++   +  V++Y+   + DL
Sbjct: 64  ENRMREILKTGSSFEKEIISVEQALEIFK--DEPYKIDLIKNFDLQNEVSIYKSHNFVDL 121

Query: 183 CRGPHVRSTGQV-KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           CRGPHV +  ++  K FKL  +AGAYWRG    PML+RIYGT WN ++EL  YL   EE 
Sbjct: 122 CRGPHVENMNKIDPKAFKLTSIAGAYWRGSEKNPMLTRIYGTLWNNEKELRSYLNLREEI 181

Query: 242 EKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQV 299
           +KRDHRKL +E+DLF I E+ G G++F+H  G KI   +  + R +  K+ Y+ + TP +
Sbjct: 182 KKRDHRKLGKELDLFSIHEEIGPGLVFFHPNGAKIRALIEDFWREEHSKNGYDILFTPHI 241

Query: 300 LDQHLWQQSGHWDSYRANMF 319
               LWQ SGH D Y+ +MF
Sbjct: 242 GKSWLWQTSGHLDFYKDSMF 261


>gi|254441019|ref|ZP_05054512.1| prolyl-tRNA synthetase [Octadecabacter antarcticus 307]
 gi|198251097|gb|EDY75412.1| prolyl-tRNA synthetase [Octadecabacter antarcticus 307]
          Length = 453

 Score =  195 bits (495), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 75/447 (16%), Positives = 154/447 (34%), Gaps = 39/447 (8%)

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLF--HIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
             L++Y   + +   RD   ++ +  L    I +  +G+  W   G+K+ + +   +  +
Sbjct: 1   MRLSRYFLPVLKESPRDATIVSHQYMLRAGMIKQSSAGIYSWLPLGFKVLKRIEQIVHEE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +   +  +  P +    LW++SG +D Y   M  +     T ++       P N     
Sbjct: 61  QERAGHIAMLMPTIQSADLWRESGRYDDYGDEMLRI-----TDRNKNDLLYGPTNEELIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNEC 404
            +F   + SY+ LP+ L      +R+E      G+MR R F   D + F  TKE   +  
Sbjct: 116 DIFRSHVSSYKALPLTLYHIQWKFRDERRPRF-GVMRGREFYMKDGYTFDLTKEDAMHAY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL-----WDDAENIMKGVLDTIKNSS 459
            +     +  Y+  G + I ++  + P     +          ++E      +  +    
Sbjct: 175 NRHLVSYLRTYERMGLQAIPMRADSGPIGGDDTHEFLVLADTGESEVFYDAAVTDLSFGD 234

Query: 460 QDRINT-------GVLLGEGAFYGPKFEYILKD-----AIGRDWQCGTI---QVDFNLPS 504
           +D I+         V+    A Y    E   +         R      I   Q+ +    
Sbjct: 235 RD-IDYDDVTQCAEVMEEFTAKYARTDETHDQALFDAIPADRQRTARGIEVGQIFYFGTK 293

Query: 505 RFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGNLPLWL---SPIQAIVTT 559
             +A           P  +H    G  + R +G +IE +      +W    +P    +  
Sbjct: 294 YSDAMGATVQGPDGKPTPVHMGSHGIGVSRLLGAIIEASHDDKGIIWPEGVTPFHVGIVN 353

Query: 560 ITS---SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASE 616
           +      A    Q +   + +  L    D R+E    K     +  +P  I  G +    
Sbjct: 354 LKQGDADADAACQSLYAAVAALGLEALYDDRDERAGSKFGTMDMIGLPWRITVGPRGLKN 413

Query: 617 RSIGIRRFGSTTTQKVSLLDAIPILTK 643
             + +    +  ++++    AI  + +
Sbjct: 414 GVVELTSRKTGESEEMPPEQAIAKIGE 440


>gi|157825653|ref|YP_001493373.1| prolyl-tRNA synthetase [Rickettsia akari str. Hartford]
 gi|166980149|sp|A8GN90|SYP_RICAH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|157799611|gb|ABV74865.1| prolyl-tRNA synthetase [Rickettsia akari str. Hartford]
          Length = 427

 Score =  195 bits (495), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 85/434 (19%), Positives = 155/434 (35%), Gaps = 28/434 (6%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  L        E++   H+ + R   +    +  +G+  W   G K+ + + + +   
Sbjct: 4   SQYFLPVLKEEPSEAQVTSHKLMLRSGMIR---QQAAGIYTWLPLGLKVLKNIENIVSLN 60

Query: 287 IK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P +   HLW +SG +++Y   M   +   D           P N     
Sbjct: 61  MNKAGALEVLMPCIQPAHLWMESGRFNNYGKEMLKFQDRHDNT-----LLFGPTNEDMIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +F H +KSY++LP  L      +R+E      G+MR R F   DA+ F   E+   +  
Sbjct: 116 DIFRHNIKSYKDLPKNLYHIQWKFRDEIRPRF-GVMRGREFLMKDAYSFDINEENAVKTY 174

Query: 406 -KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE--------NIMKGVLDTIK 456
            +++   I+ ++D G   I V     P     S      AE        +     L    
Sbjct: 175 NQMYKAYINTFRDLGVFAIPVIADNGPIGGKLSHEFHIIAETGESTIYYDKRFKTLKDNP 234

Query: 457 NSSQDRINTGVLLGEGAFYGPKFEYILKD-AIGRDWQCGTIQVDFNLPSRFNAFYVNSHS 515
           +   D I +     E      K     ++    +  + G I    +  S      +N   
Sbjct: 235 DIDVDEIKSWYAAAEEKHDINKLPISEQEITSSKGIEVGHIFYIGSKYSVNMKALINDEH 294

Query: 516 EKCHPVMIHRAVFGSIERFIGIMIE-NFKGNLPLWL---SPIQAIVTTIT---SSAVEYA 568
            K  PV +     G I R +  +IE N      +W    +P +  +  +    S  VE A
Sbjct: 295 GKLAPVEMSSYGIG-ISRLVAAIIEANCDEKGIIWPFSVAPFKVSLINLNIHDSKCVELA 353

Query: 569 QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
            +    L   ++ +  D        K   H +   P  II G K+A+   + ++   S  
Sbjct: 354 AKAYKDLSDKNIEVLYDDTEARPGSKFATHDLIGSPHQIIIGPKKAANNIVELKDRKSGN 413

Query: 629 TQKVSLLDAIPILT 642
            + + + + I  + 
Sbjct: 414 IEDIEVENLINYIK 427


>gi|90417824|ref|ZP_01225736.1| prolyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1]
 gi|90337496|gb|EAS51147.1| prolyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1]
          Length = 440

 Score =  195 bits (494), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 68/436 (15%), Positives = 144/436 (33%), Gaps = 44/436 (10%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           +E+E   HR + R   +    +  +G+  +   G ++   + + +R +       E+  P
Sbjct: 16  KEAEIVSHRLMLRAGMIR---QQAAGLYSFLPLGKRVLDKVCAIIREEQNRSGAIELLMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW++SG ++ Y   M  ++      +  R     P N      +F   +++Y++
Sbjct: 73  TIQSADLWRESGRYEDYGKEMLRIED-----RHGRDLLYGPTNEEMITDIFRSYVRTYKD 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYK 416
           LP+ L      +R+E      G+MR R F   DA+ F    +       ++    +  ++
Sbjct: 128 LPLNLYHLQWKFRDEVRPRF-GVMRSREFLMKDAYSFDLDYDNSKIAYDRMFVAYLRTFE 186

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA--- 473
             G + I ++  T P     S      A      V              GV   + A   
Sbjct: 187 RCGLKAIPMRADTGPIGGELSHEFIVLASTGESEVFCHRDYLDLAVPCEGVDFDDAAGLA 246

Query: 474 --------FYGPKFEYILKDAIG----------RDWQCGTI-QVDFNLPSRFNAFYVNSH 514
                    Y    E                  R  + G I            A      
Sbjct: 247 EIVKAWTTPYAATDEMHETATWDQLAEDDKLAARGIEVGHIFHFGTKYSEPMKAVVTGPD 306

Query: 515 SEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGNLPLWL---SPIQAIVTTITSSAVEY-- 567
            +    V +H   +G    R +  +IE +   N  +W    +P    +  +     +   
Sbjct: 307 GKD---VPVHMGSYGIGPSRLLAAIIEASHDENGIIWPKSVAPFDVGLINMKPGDADCDA 363

Query: 568 -AQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS 626
             +++   +++  + +  D ++     K     +  +P+ +I G + A      I+   +
Sbjct: 364 ACEDLYRQMQAAGIDVLYDDQDTRAGAKFASMDLIGLPMQVIVGPRGAKAGEAEIKLRAT 423

Query: 627 TTTQKVSLLDAIPILT 642
              Q + L   +  + 
Sbjct: 424 GERQSLPLSSVLARVQ 439


>gi|157828402|ref|YP_001494644.1| prolyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila Smith']
 gi|165933112|ref|YP_001649901.1| prolyl-tRNA synthetase [Rickettsia rickettsii str. Iowa]
 gi|166980152|sp|A8GRW1|SYP_RICRS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|189083508|sp|B0BXB9|SYP_RICRO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|157800883|gb|ABV76136.1| prolyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila Smith']
 gi|165908199|gb|ABY72495.1| prolyl-tRNA synthetase [Rickettsia rickettsii str. Iowa]
          Length = 426

 Score =  195 bits (494), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 84/433 (19%), Positives = 157/433 (36%), Gaps = 28/433 (6%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  L        E++   H+ + R   +    +  +G+  W   G K+ + + + +R  
Sbjct: 4   SKYFLPVLKEEPSEAQVTSHKLMLRSGMIR---QQAAGIYTWLPLGLKVLKNIENIVRLN 60

Query: 287 IK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P +   HLW +SG +D+Y   M   +   D           P N     
Sbjct: 61  MNKAGALEVLMPCIQPAHLWMESGRFDNYGKEMLKFQDRHDNT-----LLFGPTNEDMIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +F H +KSY++LP  L      +R+E      G+MR R F   DA+ F   E+   +  
Sbjct: 116 DIFRHNIKSYKDLPKNLYHIQWKFRDEIRPRF-GVMRGREFLMKDAYSFDINEENAVKTY 174

Query: 406 -KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMK--------GVLDTIK 456
            +++   I+ ++D G   I V     P     S      AE             +L    
Sbjct: 175 NQMYKAYINAFRDLGVFAIPVIADNGPIGGNLSHEFHIIAETGESTIYYDKKFKILKDNP 234

Query: 457 NSSQDRINTGVLLGEGAFYGPKFEYILKD-AIGRDWQCGTIQVDFNLPSRFNAFYVNSHS 515
           +   + I +     E  +   K     ++    +  + G I    +  S      +N   
Sbjct: 235 DIDVEEIKSWYAAAEEKYEVNKLPISEQEITSSKGIEVGHIFYIGSKYSVNMNALINDEY 294

Query: 516 EKCHPVMIHRAVFGSIERFIGIMIE-NFKGNLPLWL---SPIQAIVTTIT---SSAVEYA 568
            K  P+ +     G I R +  +IE N      +W    +P +  +  +    S  VE A
Sbjct: 295 GKLTPIEMSSYGIG-ISRLVAAIIEANCDEKGIIWPSSVAPFKVSLINLNIHDSKCVELA 353

Query: 569 QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
           +     L   ++ +  D        K   H +   P  II G K+A+   + ++   S  
Sbjct: 354 EMAYKELSDKNIEVLYDDTEARPGSKFATHDLIGSPHQIIIGPKKAANNIVELKDRKSGV 413

Query: 629 TQKVSLLDAIPIL 641
            + + +   + +L
Sbjct: 414 IEDIEVGSLMSVL 426


>gi|119384044|ref|YP_915100.1| prolyl-tRNA synthetase [Paracoccus denitrificans PD1222]
 gi|152112938|sp|A1B1L0|SYP_PARDP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|119373811|gb|ABL69404.1| prolyl-tRNA synthetase [Paracoccus denitrificans PD1222]
          Length = 450

 Score =  195 bits (494), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 81/453 (17%), Positives = 155/453 (34%), Gaps = 44/453 (9%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +       +E++   HR + R      I +  +G+  W   G+K+ + +   +  +
Sbjct: 4   SRYFMPVLKEDPKEAQIVSHRLMLRAGM---IKQQAAGIYSWLPLGYKVLRRIEQIVHEE 60

Query: 287 I-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
             +  +  +  P +    LW++SG +D Y   M  +K      +  R     P N     
Sbjct: 61  QARAGHIAMLMPTLQSADLWRESGRYDDYGEEMLRIKD-----RHKRDLLYGPTNEEMIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNEC 404
            +F   + SY++LP+ L      +R+E      G+MR R F   D + F  TKE   +  
Sbjct: 116 DIFRSHVNSYKDLPLTLYHVQWKFRDEIRPRF-GVMRGREFLMKDGYNFDLTKEDALHAY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIK----NSSQ 460
            +     +  Y+  G + I ++    P     +      AE     V    +        
Sbjct: 175 NRHLVSYLRTYERMGLQAIPMRADGGPIGGDYTHEFLVLAETGESEVFYDSEITDLKFGD 234

Query: 461 DRINT-------GVLLGEGAFYGPKFEYILKD----------AIGRDWQCGTIQV-DFNL 502
            RI+         VL    + Y    E                + R  + G I       
Sbjct: 235 RRIDYDDVAQCRAVLEEFTSRYARTDETHDAALFEQIPKERRRVARGIEVGQIFYFGTKY 294

Query: 503 PSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGNLPLWL---SPIQAIV 557
                A  V     +   V +H    G  + R +G +IE +      +W    +P    +
Sbjct: 295 SEPMGATVVGPDGSR---VPVHMGSHGIGVSRLLGAIIEASHDDRGIIWPEGVTPFHVGI 351

Query: 558 TTITS---SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
             +     S     + +   LK+  L    D R+E    K     +  +P  I  G +  
Sbjct: 352 VNLKQGDASTDGACEALYAELKAQGLDALYDDRDERAGAKFATMDLVGLPWRITVGPRGL 411

Query: 615 SERSIGIRRFGSTTTQKVSLLDAIPILTKESLP 647
           +   + +    +  + ++S  +A+  L +   P
Sbjct: 412 AANKVELTSRRTGESVEMSPQEAVVRLREIYQP 444


>gi|148259950|ref|YP_001234077.1| prolyl-tRNA synthetase [Acidiphilium cryptum JF-5]
 gi|326403096|ref|YP_004283177.1| prolyl-tRNA synthetase [Acidiphilium multivorum AIU301]
 gi|166980092|sp|A5FX26|SYP_ACICJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|146401631|gb|ABQ30158.1| prolyl-tRNA synthetase [Acidiphilium cryptum JF-5]
 gi|325049957|dbj|BAJ80295.1| prolyl-tRNA synthetase [Acidiphilium multivorum AIU301]
          Length = 437

 Score =  195 bits (494), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 76/444 (17%), Positives = 145/444 (32%), Gaps = 39/444 (8%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        E++   HR + R   +    +  +G+  W   G ++   + + +R +
Sbjct: 4   SRSLIPTLKETPAEAQIVSHRLMLRAGLIR---QQSAGIYAWLPAGLRVLHNIANIVREE 60

Query: 287 I-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
             +   +EI  P +    LW++SG +D+Y   M  ++   D     R     P N     
Sbjct: 61  QARAGSQEILMPTIQSAELWRESGRYDAYGPEMLRIRDRHD-----REMLYGPTNEEMLT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
           A+    ++SYR+LP  L +    +R+E       L R R F   D + F    E      
Sbjct: 116 AIMRDSVQSYRDLPQMLYQIQWKFRDEVRPRFGVL-RGREFYMKDGYSFDLDYEGAVESY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD----TIKNSSQ 460
            ++    +  +K  G   + ++  T P     S      A     GV             
Sbjct: 175 RRMMLAYMRTFKRMGVRAVPMRADTGPIGGNLSHEFHILAPTGESGVFYDSSFETIELGD 234

Query: 461 DRINTGVLLGEGAF-------YGPKFEYILKDAI----------GRDWQCGTIQV-DFNL 502
           D  +        AF       Y    E   + A           GR  + G I       
Sbjct: 235 DAYDYEARADLDAFFDRMTSLYAATDEKHDEAAWAKVPEDRRREGRGIEVGQIFYFGTKY 294

Query: 503 PSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVT 558
               N   V     + HP M    +   + R  G +IE          P  ++P +A + 
Sbjct: 295 SQAMNFTVVGPDGARLHPEMGSYGI--GVSRLTGAIIEASHDEAGIIWPDAIAPFRASIL 352

Query: 559 TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERS 618
            +             +  +       D R      K  +  +   P  +I G + A++  
Sbjct: 353 NLRQGDQVTDALCERIYDALGRDALYDDREARAGEKFADADLMGHPWQVIVGPRGAAKGQ 412

Query: 619 IGIRRFGSTTTQKVSLLDAIPILT 642
           + ++   +    ++ +  A+  + 
Sbjct: 413 VELKHRRTGERAELDIESALAKVR 436


>gi|15921730|ref|NP_377399.1| prolyl-tRNA synthetase [Sulfolobus tokodaii str. 7]
 gi|74581041|sp|Q971B5|SYP_SULTO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|15622517|dbj|BAB66508.1| 483aa long hypothetical prolyl-tRNA synthetase [Sulfolobus tokodaii
           str. 7]
          Length = 483

 Score =  194 bits (493), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 87/442 (19%), Positives = 176/442 (39%), Gaps = 64/442 (14%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           +       E++       + RE +++        G+  W   G+KI Q ++  +R+ + +
Sbjct: 1   MKVSKEKWEKNFSEWLDWVLREAEIYDYGRYPVKGMGVWMPYGFKIRQNVLQLIRKLLDE 60

Query: 290 -DYEEINTPQVLDQHL-WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
             +EE+  P ++ + L  ++S H   +   ++ V        D++  AL+P +      +
Sbjct: 61  TGHEEVLFPLLIPEDLLKKESEHIRGFEEEVYWVTKGGSQDLDVK-LALRPTSETSITFM 119

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD-DAHV-FCTKEQMFNECL 405
            +  +KSY++LP +  +  SV+R E   +   +MR+R  T   +AH    T E    +  
Sbjct: 120 ESFWVKSYKQLPKKYYQIVSVFRYETK-ATRPMMRLREITTFKEAHTLHETYEDAARQVD 178

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
           +  N+  + + + G   ++ K              WD                       
Sbjct: 179 EAINIYKAFFDELGIPYMISKRPE-----------WDKF--------------------- 206

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIH 524
                 GA Y   F+ IL D+  R  Q GT+  +  +    F+           +P   H
Sbjct: 207 -----AGAEYTIAFDTILPDS--RVLQIGTVHHLGQHFTKAFDFKIQRKDGSLDYP---H 256

Query: 525 RAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI-------TSSAVEYAQEIAN 573
           +  +G  +R I ++I    ++    L   ++PI+ ++  I       T+  + YA+E+  
Sbjct: 257 QTSYGISDRVIAVLIAINGDDHGPVLNPVIAPIKVVIVPIPAKDEETTAKIINYAKEVGE 316

Query: 574 LLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
            LK+  +++  D   E T   K     +K +P+ I  G KE +  ++ I+R  +   + V
Sbjct: 317 NLKNRGITVVIDDDKEKTPGEKFYIWELKGVPLRIEIGPKELNNNTVYIKRRDTFEGKSV 376

Query: 633 SLLDAIPILTK--ESLPPDCQK 652
               A+  +    E +  D  +
Sbjct: 377 PKDKAVEEVNTLLEKIKNDLHE 398


>gi|254474756|ref|ZP_05088142.1| prolyl-tRNA synthetase [Ruegeria sp. R11]
 gi|214028999|gb|EEB69834.1| prolyl-tRNA synthetase [Ruegeria sp. R11]
          Length = 450

 Score =  194 bits (493), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 75/449 (16%), Positives = 155/449 (34%), Gaps = 44/449 (9%)

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLF--HIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
             L++Y   + +    + + ++    L    I +  +G+  W   G+K+ + +   +  +
Sbjct: 1   MRLSRYFLPVLKENPSEAQIVSHRYMLRAGMIKQSAAGIYSWLPLGFKVLKKIEGIVHEE 60

Query: 287 -IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            ++  +  +    +    LW++SG +D Y   M  +K   D     R     P N     
Sbjct: 61  QMRAGHIPMLMSTMQPADLWRESGRYDDYGQEMLRIKDRHD-----RDMLFGPTNEEMIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNEC 404
            +F + + SY++LP+ + +    +R+E      G+MR R F   D + F  +KE   +  
Sbjct: 116 DIFRNHVSSYKDLPLTMYQVQWKFRDEIRPRF-GVMRGREFYMKDGYNFDLSKEDALHAY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNS----SQ 460
            +     +  Y+  G + I ++    P     +      AE     V      +      
Sbjct: 175 NRHLVSYLRTYERMGLQAIPMRADGGPIGGDYTHEFLVLAETGESEVFYDSAVTDLTFGD 234

Query: 461 DRINT-------GVLLGEGAFYGPKFEYILKDAIG----------RDWQCGTIQV-DFNL 502
             I+        GVL    + Y    E   +              R  + G I       
Sbjct: 235 REIDYDSVEQCQGVLEEFTSKYARTDETHDEALFNEIPEDRRRVARGIEVGQIFYFGTKY 294

Query: 503 PSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGNLPLWL---SPIQAIV 557
                A       E    V +H    G  + R +G +IE +      +W    +P    +
Sbjct: 295 SEAMGAKVQTPDGE----VPVHMGSHGIGVSRLLGAIIEASHDDKGIIWPEGVTPFHCGI 350

Query: 558 TTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
             +     +A    +++   L +  L    D RNE    K     +  +P  I  G +  
Sbjct: 351 VNLKQGDEAADGACEDLYKALVAAGLDPLYDDRNERAGGKFATMDLIGLPWRITVGPRGL 410

Query: 615 SERSIGIRRFGSTTTQKVSLLDAIPILTK 643
               + +    +  +++++   A+  + +
Sbjct: 411 KNGVVELTSRRTGESEELAPEAAVAKIIE 439


>gi|294677986|ref|YP_003578601.1| prolyl-tRNA synthetase [Rhodobacter capsulatus SB 1003]
 gi|294476806|gb|ADE86194.1| prolyl-tRNA synthetase [Rhodobacter capsulatus SB 1003]
          Length = 446

 Score =  194 bits (492), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 78/439 (17%), Positives = 150/439 (34%), Gaps = 42/439 (9%)

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEI 294
               E++   HR + R      I +  +G+  W   G+K+ + +   +  + I+  +  +
Sbjct: 13  ENPAEAQIVSHRLMLRAGM---IKQQAAGIYSWLPLGFKVLKRIEQIVHEEQIRAGHIPL 69

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
             P +    LW++SG +D Y   M  +K      +  R     P N      +F   + S
Sbjct: 70  LMPTLQPADLWRESGRYDDYGQEMLRIKD-----RHEREMLYGPTNEEMITDIFRAHVSS 124

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIIS 413
           Y++LP+ L      +R+E      G+MR R F   D + F  T+E   +   +     + 
Sbjct: 125 YKDLPLTLYHIQWKFRDEVRPRF-GVMRGREFYMKDGYNFDLTREDALHAYNRHMVSYLR 183

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE-- 471
            Y+  G   I ++ ++ P     +      A+     V    +       +  V   +  
Sbjct: 184 TYERMGLTAIPMRAASGPIGGDNTHEFLVLAQTGESEVFYDAQVPDLKLGDRAVDYDDRD 243

Query: 472 ---------GAFYGPKFEYILKD----------AIGRDWQCGTIQV-DFNLPSRFNAFYV 511
                       Y    E   +            +GR  + G I            A  V
Sbjct: 244 QVAAICQEFTTLYARTDETHDEAVFNQIPEARRCVGRGIEVGQIFYFGTKYSEAMGATVV 303

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNLPLWL---SPIQAIVTTI--TSSAV 565
                +  PV +     G   R +G +IE N      +W    +P    +  +     A 
Sbjct: 304 TPDGTRV-PVEMGSHGIGVS-RLLGALIEANHDERGIIWPEGVTPFHVGIVNLKQGDGAT 361

Query: 566 EYAQE-IANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRF 624
           + A   I   L +  L    D R+E    K     +  +P  I  G +  +   + +   
Sbjct: 362 DAACAGIYKALVAKGLDPLYDDRDERAGAKFATMDLIGLPWRITVGPRGLAGGVVELTSR 421

Query: 625 GSTTTQKVSLLDAIPILTK 643
            +  ++++S   A+  + +
Sbjct: 422 RTGESEEMSAEAAVDRIAQ 440


>gi|153217652|ref|ZP_01951333.1| threonyl-tRNA synthetase [Vibrio cholerae 1587]
 gi|124113402|gb|EAY32222.1| threonyl-tRNA synthetase [Vibrio cholerae 1587]
          Length = 159

 Score =  194 bits (492), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 66/149 (44%), Positives = 93/149 (62%)

Query: 496 IQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQA 555
           +Q+DFNLP+R  A YV   +E+  PVMIHRA+ GS+ERFIGI+IE + G  P WL+P QA
Sbjct: 1   MQLDFNLPTRLGATYVGESNERLIPVMIHRAILGSLERFIGILIEEYAGFFPTWLAPEQA 60

Query: 556 IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEAS 615
           +V  IT    +YA E+A  L+   +  + D RNE I +KIREH++K++P +++CGD+E  
Sbjct: 61  VVVNITDKQADYAHEVAQKLQKCGIRAKADLRNEKIGFKIREHTLKRVPYMLVCGDQEME 120

Query: 616 ERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
              I +R        K  L D I  +  E
Sbjct: 121 ADEIAVRTRKGKDLGKFKLDDFIAHIQAE 149


>gi|257075630|ref|ZP_05569991.1| prolyl-tRNA synthetase [Ferroplasma acidarmanus fer1]
          Length = 470

 Score =  194 bits (492), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 81/420 (19%), Positives = 153/420 (36%), Gaps = 62/420 (14%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDY 291
              +   +      + ++     L     +  G+  W   G KI  ++ S +R    D  
Sbjct: 5   KCQMENKKIDFSEWYNEIIDTAKLSDKRYNIKGMNVWLPYGLKIIHSIDSLLREYSDDGG 64

Query: 292 -EEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
            EE++ P ++ +   + +  H   +   ++ V     T  D+   AL+P +      +F 
Sbjct: 65  IEEVSFPVLISREQLEVEFEHVKGFENEIYWVTKGGTTPLDI-DLALRPTSEAAMYTMFP 123

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV----FCTKEQMFNECL 405
             ++S+ +LP R+ +  +VYR E        +RVR     +AH     F   E+  +E L
Sbjct: 124 LWIRSHSDLPFRIYQIVNVYRYETK-HTRSFIRVREIHFYEAHTAHVDFEDAEKQMDEYL 182

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
           KI   +      +    I                 WD                       
Sbjct: 183 KIMERLSDDLCIYFSMDIRP--------------DWDKF--------------------- 207

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIH 524
                 GA Y   F+  +     R  Q GTI     N    +   Y++ + +  +   + 
Sbjct: 208 -----PGAMYSVAFDTPMPGY--RSLQIGTIHEYGENFAKNYGIKYLDENGDMKY---VS 257

Query: 525 RAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI----TSSAVEYAQEIANLLK 576
           +  FG  ER +  +I    ++    LP  L+P+Q I+  I        +EY+  I + L 
Sbjct: 258 QTTFGLSERLMAAVIGIHGDDKGLVLPYKLAPVQVIIVPIPSDNYDEIIEYSNGIKSKLM 317

Query: 577 SHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
              +  + D  + T  YK  E  ++ +P+ I  G +E +++++ I         K+ L +
Sbjct: 318 EIGIRCQIDNSDYTPGYKFNEWEMRGVPVRIEIGKREVNDKTLTISLRTRKKKIKIELEE 377


>gi|11499201|ref|NP_070438.1| prolyl-tRNA synthetase [Archaeoglobus fulgidus DSM 4304]
 gi|2648947|gb|AAB89637.1| prolyl-tRNA synthetase (proS) [Archaeoglobus fulgidus DSM 4304]
          Length = 575

 Score =  194 bits (492), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 73/414 (17%), Positives = 157/414 (37%), Gaps = 59/414 (14%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQ 298
           +E+    + ++ +  ++  +     G+  W   G+KI Q + S +R  +  +++E+  P 
Sbjct: 110 KENFSEWYHEVIQTAEIMDVRYPVKGLYVWFPFGFKIRQLVYSKLREIMDREHDEVYFPA 169

Query: 299 VLDQ-HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           ++ +  L ++  H   +   ++ +     T  D++  AL+P +      +F   ++++ +
Sbjct: 170 LIPETELGKEGEHIKGFEDEVYWITHGGLTPLDVK-LALRPTSETAMYPMFRLWVRNHAD 228

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFT-QDDAHVFCTK-EQMFNECLKIHNLIISIY 415
           LP+++ +  + +R E       L+R+R  T   +AH      E+      K        Y
Sbjct: 229 LPLKVYQIVNTFRYETK-HTRPLIRLREITSFKEAHTVHKDFEEAAEHVKKAIGFYKEFY 287

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                  ++++              WD                             GA Y
Sbjct: 288 DFLAIPYMVIRRPE-----------WDKF--------------------------PGAAY 310

Query: 476 GPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
              F+ I+ D  GR  Q GT+  +  N    F+  Y   + E       H+  +G  ER 
Sbjct: 311 TIAFDTIMPD--GRTLQIGTVHHLADNFARTFDIKYEAPNGE---HYYAHQTCYGISERC 365

Query: 535 IGIMI----ENFKGNLPLWLSPIQAIVTTI-----TSSAVEYAQEIANLLKSHHLSIETD 585
           I  +I    ++    LP  ++P+Q ++  I       + +E  +++A  LK+    +  D
Sbjct: 366 IAALISVHGDDLGLVLPFEVAPVQIVIIPILYKGKEEAVMEACRKLAEKLKA--FRVVLD 423

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
              +    K  +  +K +PI    G ++A +    +         +V L +   
Sbjct: 424 EGEDRPGAKYYKWELKGVPIRFEIGPRDAEKGVAVVSFRDEKRKFEVPLDEVDE 477


>gi|15892451|ref|NP_360165.1| prolyl-tRNA synthetase [Rickettsia conorii str. Malish 7]
 gi|229586653|ref|YP_002845154.1| prolyl-tRNA synthetase [Rickettsia africae ESF-5]
 gi|81854111|sp|Q92I92|SYP_RICCN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|259511616|sp|C3PNA1|SYP_RICAE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|15619605|gb|AAL03066.1| prolyl-tRNA synthetase [Rickettsia conorii str. Malish 7]
 gi|228021703|gb|ACP53411.1| Prolyl-tRNA synthetase [Rickettsia africae ESF-5]
          Length = 426

 Score =  193 bits (491), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 84/433 (19%), Positives = 157/433 (36%), Gaps = 28/433 (6%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  L        E++   H+ + R   +    +  +G+  W   G K+ + + + +R  
Sbjct: 4   SKYFLPVLKEEPSEAQVTSHKLMLRSGMIR---QQAAGIYTWLPLGLKVLKNIENIVRLN 60

Query: 287 IK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P +   HLW +SG +D+Y   M   +   D           P N     
Sbjct: 61  MNKAGALEVLMPCIQPAHLWMESGRFDNYGKEMLKFQDRHDNT-----LLFGPTNEDMIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +F H +KSY++LP  L      +R+E      G+MR R F   DA+ F   E+   +  
Sbjct: 116 DIFRHNIKSYKDLPKNLYHIQWKFRDEIRPRF-GVMRGREFLMKDAYSFDINEENAVKTY 174

Query: 406 -KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV--------LDTIK 456
            +++   I+ ++D G   I V     P     S      AE     +        L    
Sbjct: 175 NQMYKAYINAFRDLGVFVIPVIADNGPIGGNLSHEFHIIAETGESTIYYDKKFKTLKDNP 234

Query: 457 NSSQDRINTGVLLGEGAFYGPKFEYILKD-AIGRDWQCGTIQVDFNLPSRFNAFYVNSHS 515
           +   + I +     E  +   K     ++    +  + G I    +  S      +N   
Sbjct: 235 DIDVEEIKSWYAAAEEKYEVNKLPISEQEITSSKGIEVGHIFYIGSKYSVNMNALINDEY 294

Query: 516 EKCHPVMIHRAVFGSIERFIGIMIE-NFKGNLPLWL---SPIQAIVTTIT---SSAVEYA 568
            K  P+ +     G I R +  +IE N      +W    +P +  +  +    S  VE A
Sbjct: 295 GKLTPIEMSSYGIG-ISRLVAAIIEANCDEKGIIWPSSVAPFKVSLINLNIHDSKCVELA 353

Query: 569 QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
           +     L   ++ +  D        K   H +   P  II G K+A+   + ++   S  
Sbjct: 354 EMAYKELSDKNIEVLYDDTEARPGSKFATHDLIGSPHQIIIGPKKAANNIVELKDRKSGV 413

Query: 629 TQKVSLLDAIPIL 641
            + + +   + +L
Sbjct: 414 IEDIEVGSLMSVL 426


>gi|297621143|ref|YP_003709280.1| hypothetical protein wcw_0913 [Waddlia chondrophila WSU 86-1044]
 gi|297376444|gb|ADI38274.1| hypothetical protein wcw_0913 [Waddlia chondrophila WSU 86-1044]
          Length = 509

 Score =  193 bits (490), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 107/570 (18%), Positives = 196/570 (34%), Gaps = 81/570 (14%)

Query: 77  CAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPF 136
            A ++  ++ +++P+ ++      + GFY       PF    L   E++++  I  +   
Sbjct: 12  AAALLGRSLCTLFPQAKILHFDQTKKGFYCLCKFPHPFDDQALRMTEEELKRTIQENLKI 71

Query: 137 LKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKK 196
               +  E A  LFE +      + +    +   + L R  E++ +C  PH+  T QV  
Sbjct: 72  ETVEMMRENAAVLFEHRGLEPMADEI-RKGSSTIIELVRIEEFYGVCPKPHLSGTRQVGS 130

Query: 197 FFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLF 256
                K  G           L +I G A  T ++L Q  +F   +    H +L +E DLF
Sbjct: 131 IKLFWKREGE----------LIKIEGIARETSKDLKQ--FFKNFAAFTSHEELGKEADLF 178

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
            + +      FW  KG  I + L+ + +                                
Sbjct: 179 FVEK---NCCFWAPKGELIREILVQWWK------------------------SSLRGLGF 211

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
           ++F+   A  T      +  +                        LAE     R+E    
Sbjct: 212 SIFSSSGASITADPRFEYGCQ------------------------LAEISEKKRDEELSM 247

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
             GL  +  +   D   +   E+     +      I    +               K   
Sbjct: 248 EGGLYDL-PWATSDRFWWALDEKSALANVNSCLHFIKKTVNMMAIDCSWIFYNNLLKSRR 306

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
                D +  I+   L+         I T         Y    E    D++GR+W    I
Sbjct: 307 CQKNRDLSIEILSQSLEISG------IETFRQNESFQKYSA-IEARFTDSLGREWSGPRI 359

Query: 497 QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI 556
           ++        +A            V++  +VF S+E  I +++E+ KG LP WL+P Q  
Sbjct: 360 ELR-------DASGFQIDQSMDSFVLVG-SVFRSLESLIALLLESSKGELPFWLAPEQVR 411

Query: 557 VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASE 616
           +  +    V +A EIA  L  +   +  D    +++ K+   +  K+P I++ G +E  E
Sbjct: 412 ILPVKQEDVAWAVEIAEELIENGYRVHCDADPGSLSEKVSVANQYKVPYIVVVGKREREE 471

Query: 617 RSIGIR-RFGSTTTQKVSLLDAIPILTKES 645
           +++ +R          VS    +  L K+ 
Sbjct: 472 QAVSVRCSSKGNKASVVSFELFMEELKKQR 501


>gi|325048295|emb|CBX25717.1| hypothetical protein [Trichinella spiralis]
          Length = 310

 Score =  193 bits (490), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 76/264 (28%), Positives = 133/264 (50%), Gaps = 11/264 (4%)

Query: 2   PSDIKLTFPDGSIKN-FPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSI 59
              I +T PDG          +  D+   +  ++  + +   ++G + DL  P+ +  ++
Sbjct: 55  SEPITVTLPDGKEVEAMAWRTSPLDIMTKL--NMGGRPIVSKVDGVLWDLERPLEKSCNL 112

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF-DKEQPFSSDE 118
           + +  +D     V  HS AH++ EA + ++    +  GP IE+GFYYD    ++  ++++
Sbjct: 113 QFLLFDDDEGKQVFWHSTAHVLGEAAERLF-GCCLCYGPPIENGFYYDMFMDDRTVTAED 171

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           + ++ K M+  I    PF +  L  E+  E+F+     +K+ ILE+       T YR G 
Sbjct: 172 MDKLAKIMKAAIDGKQPFERLELKKEELMEMFKY--NPFKLRILENKVKTPTTTAYRCGP 229

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             DLCRGPHVR TG +  F K+ K +  +W GDS+   L R+YG ++   ++L  +    
Sbjct: 230 LIDLCRGPHVRHTGLLNSF-KITKNSSTFWEGDSSMESLQRVYGVSFPNSKQLN-FGKDE 287

Query: 239 EESEKRDHRKLAREMDLFHIAEDG 262
            E+  RDHRKL R    F+  ++ 
Sbjct: 288 GEAASRDHRKLGRHR-TFYFHDES 310


>gi|304319826|ref|YP_003853469.1| prolyl-tRNA synthetase [Parvularcula bermudensis HTCC2503]
 gi|303298729|gb|ADM08328.1| prolyl-tRNA synthetase [Parvularcula bermudensis HTCC2503]
          Length = 446

 Score =  193 bits (490), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 78/433 (18%), Positives = 136/433 (31%), Gaps = 43/433 (9%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
            HR + R   +    +  +G+  W   G K+ + + + +R + +     E+  P +    
Sbjct: 22  SHRLMLRSGMVR---QQAAGIYAWLPLGLKVLKKVEAIVREEQERAGVAELLMPTIQPAS 78

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW QSG +D+Y   M  +K      +  R     P N      +   G+KSY+ELP  L 
Sbjct: 79  LWHQSGRYDAYGPEMLRLKD-----RHGRDMLYGPTNEEMITELVRAGIKSYKELPKTLF 133

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKDFGFEK 422
                +R+E      G+MR R F   DA+ F  + E      L+     +  +   G + 
Sbjct: 134 HIQWKFRDEVRPRF-GVMRGREFLMKDAYSFDLSPEAARRSYLRFFAAYLRTFARLGVKA 192

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG---------A 473
           I V+  T P     S      AE     V        +    T +               
Sbjct: 193 IPVRADTGPIGGKLSHEFVVLAETGESEVFTAKGLVEKTPPPTSLDYDGDLEPLFAEWTG 252

Query: 474 FYGPKFEYILKDAI----------GRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVM 522
            Y    E   + A            R  + G I                           
Sbjct: 253 TYAATDEMHDEAAFLALPEDQRLQARGIEVGHIFYFGTKYSEPMQFAVEGPDGR----AF 308

Query: 523 IHRAVFGS-IERFIGIMIE-NFKGNLPLWLSPIQAI------VTTITSSAVEYAQEIANL 574
           +    +G  + R +G +IE +       W  P+         + T           + + 
Sbjct: 309 VEMGSYGIGVSRLVGALIEAHHDDQGCRWPVPVAPYEVGLVNLKTGHDGTDGACHRLYDE 368

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
             +  L +  D   +    K     +  +P+I+  G +        ++   +   Q+V L
Sbjct: 369 AVAAGLDVLLDDSGDRAGEKFARMDLIGLPLIVTIGPRGVEAGQAEVKDRRTGAKQEVPL 428

Query: 635 LDAIPILTKESLP 647
              +  L    LP
Sbjct: 429 TGLVDYLRSAILP 441


>gi|159043296|ref|YP_001532090.1| prolyl-tRNA synthetase [Dinoroseobacter shibae DFL 12]
 gi|189083497|sp|A8LQU6|SYP_DINSH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|157911056|gb|ABV92489.1| prolyl-tRNA synthetase [Dinoroseobacter shibae DFL 12]
          Length = 445

 Score =  193 bits (490), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 81/432 (18%), Positives = 154/432 (35%), Gaps = 38/432 (8%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E++   HR + R      I +  +G+  W   G+K+ + +   +  + +   +  +  P 
Sbjct: 17  EAQIVSHRLMLRAGM---IKQASAGIYSWLPLGYKVLRRIEEIVHEEQQRAGHIPMLMPT 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW++SG +D Y   M  +     T +  R     P N      +F   + SY++L
Sbjct: 74  LQSADLWRESGRYDDYGQEMLRI-----TDRHGRDMLYGPTNEELITDIFRSNVGSYKDL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKD 417
           P+ L      +R+E      G+MR R F   D + F  TKE   +   +     +  Y+ 
Sbjct: 129 PLTLYHIQWKFRDEVRPRF-GVMRGREFLMKDGYNFDLTKEAALHAYNRHLVSYLRSYER 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNS----SQDRINT-------G 466
            G + I ++    P     +      AE     V    + +       +I+         
Sbjct: 188 MGLQAIPMRADGGPIGGDYTHEFLVLAETGESEVFYDAEITDLSFGDRQIDYDDVGQCQA 247

Query: 467 VLLGEGAFYGPKFEYILKDAIG-----RDWQCGTI---QVDFNLPSRFNAFYVNSHSEKC 518
           VL    + Y    E    DA       R      I   Q+ +      +A       +  
Sbjct: 248 VLEEFTSRYARTDETHDPDAFAKVPEARRRSARGIEVGQIFYFGTKYSDAMGATVIDKDQ 307

Query: 519 HPVMIHRAVFGS-IERFIGIMIE-NFKGNLPLWL---SPIQAIVTTI--TSSAVEYAQE- 570
           + V +H    G  + R +G +IE +      +W    +P    +  +    +A + A E 
Sbjct: 308 NQVPVHMGSHGIGVSRLLGAIIEASHDDKGIIWPEGVTPFHCGIVNLKQGDAAADAACEG 367

Query: 571 IANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
           + + L    L    D RNE    K     +  +P  I  G +      + +    +  ++
Sbjct: 368 LYDALTKAGLEPLYDDRNERAGGKFATMDLIGLPWRITVGPRGLKAGVVELTSRKTGESE 427

Query: 631 KVSLLDAIPILT 642
           ++S   A+  + 
Sbjct: 428 ELSPEAAVAKVV 439


>gi|4972787|gb|AAD34790.1|AF136400_4 threonyl-tRNA synthetase [Pseudomonas fluorescens]
          Length = 161

 Score =  193 bits (489), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 58/150 (38%), Positives = 92/150 (61%)

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI 553
           GT+Q+DFNLP R  A YV+  + + HPVM+HRA+ GS ERF+GI+IE+++G  P WL+P 
Sbjct: 1   GTLQLDFNLPIRLGAEYVSEDNSRKHPVMLHRAILGSFERFVGILIEHYEGAFPAWLAPT 60

Query: 554 QAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
           QA+V  IT    ++A E+   L       ++D RNE I +KIREH++ K+P +++ GD+E
Sbjct: 61  QAVVMNITDKQADFALEVEKTLNQSGFRAKSDLRNEKIGFKIREHTLLKVPYLLVIGDRE 120

Query: 614 ASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              +++ +R         + +      L +
Sbjct: 121 VEMQTVAVRTREGEDLGSMPVAQFSAFLAQ 150


>gi|304314752|ref|YP_003849899.1| prolyl-tRNA synthetase [Methanothermobacter marburgensis str.
           Marburg]
 gi|302588211|gb|ADL58586.1| prolyl-tRNA synthetase [Methanothermobacter marburgensis str.
           Marburg]
          Length = 465

 Score =  193 bits (489), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 67/405 (16%), Positives = 145/405 (35%), Gaps = 55/405 (13%)

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQ 302
                 +  E ++        G+  W   G++I +  ++ ++R +  D+EE+  P ++ +
Sbjct: 5   SEWFHNILEEAEIIDQRYPVKGMHVWMPHGFRIRKNTLNILKRILDRDHEEVLFPLLVPE 64

Query: 303 HLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
               +++ H   +   ++ V     + K  R  AL+P +      +F   ++S+ +LP+R
Sbjct: 65  DELAKEAIHVKGFEDEVYWVTHGGLS-KLQRKLALRPTSETVMYPMFALWVRSHTDLPMR 123

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQD-DAHVFC-TKEQMFNECLKIHNLIISIYKDFG 419
             +  + +R E       L+RVR  T   +AH    T ++   +  +   +    +   G
Sbjct: 124 FYQIVNTFRYETK-HTRPLIRVREITTFKEAHTIHATADEAEEQVERAIEIYREFFDSLG 182

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
              ++ K              WD                             G+ Y   F
Sbjct: 183 IPYLITKRPP-----------WDKF--------------------------PGSDYTMAF 205

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           + ++ D  G+  Q GT+       +R   F +   + +     +H+  +G  +R I  +I
Sbjct: 206 DTLMPD--GKTLQIGTVHNLGQTFAR--TFEIKFENPEGEHEYVHQTCYGLSDRVIASVI 261

Query: 540 ENFKGNLPLWLSPI----QAIVTTIT-----SSAVEYAQEIANLLKSHHLSIETDFRNET 590
                   L L P     Q ++  +         +E  +++ + L      +  D R+  
Sbjct: 262 AVHGDESGLCLPPEVAAHQVVIVPVIFKKAADEVMEACRDLRDSLGDAGFRVHLDDRDLR 321

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
              K  E  ++ +P+ +  G ++    S  I R  +       L 
Sbjct: 322 AGRKYYEWEMRGVPLRVEIGPRDLENNSAVISRRDTGEKITADLD 366


>gi|84501591|ref|ZP_00999763.1| prolyl-tRNA synthetase [Oceanicola batsensis HTCC2597]
 gi|84390212|gb|EAQ02771.1| prolyl-tRNA synthetase [Oceanicola batsensis HTCC2597]
          Length = 445

 Score =  193 bits (489), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 75/447 (16%), Positives = 152/447 (34%), Gaps = 41/447 (9%)

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLF--HIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
             L++Y   + +    D + ++    L    I +  +G+  W   G+++ + +   +  +
Sbjct: 1   MRLSRYFLPVLKETPADAQIVSHRYMLRAGMIKQASAGIYSWLPLGYRVLRRIEQIVHEE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +   +  +  P +    LW++SG +D+Y   M  ++   D     R     P N     
Sbjct: 61  QQRAGHIPLLMPTLQSADLWRESGRYDAYGPEMLRIRDRHD-----RDMLFGPTNEELIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNEC 404
            +F   ++SY++LP+ L      +R+E      G+MR R F   D + F  TKE   +  
Sbjct: 116 DIFRSYVRSYKDLPMTLYHIQWKFRDEVRPRF-GVMRGREFLMKDGYNFDLTKEDALHAY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIK----NSSQ 460
            +     +  Y+  G + I ++  + P     +      AE     V    +        
Sbjct: 175 NRHLVSYLRTYERMGLQAIPMRADSGPIGGDDTHEFLVLAETGESEVFYDSEITDLKFGD 234

Query: 461 DRINT-------GVLLGEGAFYGPKFEYILKDAIGRD----------WQCGTIQV-DFNL 502
             I+         VL    + Y    E   ++   R            + G I       
Sbjct: 235 REIDYDSVEQCQAVLEEFTSRYARTDETHDEEVFNRIPEDRRRVARGIEVGQIFYFGTKY 294

Query: 503 PSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNLPLWL---SPIQAIVT 558
                A        K  PV +     G   R +G +IE +      +W    +P    + 
Sbjct: 295 SEPMGATVQGPDG-KQVPVHMGSHGIGVS-RLLGAIIEASHDDKGIIWPEGVTPFHVGIV 352

Query: 559 TI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEAS 615
            +      A    Q + +   +  L    D R+E    K     +  +P  I  G +   
Sbjct: 353 NLKQGDDEADAACQALYDGFTALGLDPLYDDRDERAGGKFATMDLIGLPWRITVGPRGLK 412

Query: 616 ERSIGIRRFGSTTTQKVSLLDAIPILT 642
              + +    +  ++++   +A+  + 
Sbjct: 413 NGVVELTSRRTGESEELPPEEAVRRVA 439


>gi|306841942|ref|ZP_07474620.1| prolyl-tRNA synthetase [Brucella sp. BO2]
 gi|306287975|gb|EFM59383.1| prolyl-tRNA synthetase [Brucella sp. BO2]
          Length = 400

 Score =  192 bits (488), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 69/412 (16%), Positives = 136/412 (33%), Gaps = 47/412 (11%)

Query: 269 HRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
              G K+   + + +R +       EI  P +    LW++SG +D+Y   M  ++     
Sbjct: 1   MPIGLKVLNKVCTIIREEQNRAGANEILMPTIQSADLWRESGRYDAYGKEMLRIQD---- 56

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
            +  R     P N      +F   ++SY++LP+ L      +R+E      G+MR R F 
Sbjct: 57  -RQEREMLFGPTNEEMVTDIFRSYVRSYKDLPLNLYHIQWKFRDEVRPRF-GVMRSREFL 114

Query: 388 QDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
             DA+ F    E       ++    +  +   G + I ++  T P     S      AE 
Sbjct: 115 MKDAYSFDLDYEGAKMAYYRMFVSYLRTFARVGLQAIPMRADTGPIGGDLSHEFIILAET 174

Query: 447 IMKGV-----------------------LDTIKNSSQDRINTGVLLGEGAFYG-PKFEYI 482
               V                       L  I             + + A +   K E  
Sbjct: 175 GESQVYCDRAYLDLAVPGADTDFRNDAQLTDIVTRWTTPYAATDEMHDEADWAKVKPESQ 234

Query: 483 LKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE 540
           +     R  + G I            A       ++    ++    +G    R +   IE
Sbjct: 235 VSA---RGIEVGHIFHFGTKYSEPMGAKVQGPDGKEH---LVSMGSYGIGPSRLVAAAIE 288

Query: 541 NFKGN----LPLWLSPIQAIVT---TITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
               +     P  ++P  A +             ++++   L +  +    D ++E    
Sbjct: 289 ASHDDAGIVWPKAIAPFGAGIVNMKPGDEGCDGVSEKLYEALTNAGVDPLLDDKDERPGA 348

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           K     +  +P  +I G +  +   + ++   +   Q + +  AI +LT ++
Sbjct: 349 KFATMDLIGLPTQVIVGPRGVAAGEVEVKDRKTGERQSLGIDAAINMLTAQA 400


>gi|86138530|ref|ZP_01057103.1| prolyl-tRNA synthetase [Roseobacter sp. MED193]
 gi|85824590|gb|EAQ44792.1| prolyl-tRNA synthetase [Roseobacter sp. MED193]
          Length = 451

 Score =  192 bits (488), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 75/445 (16%), Positives = 151/445 (33%), Gaps = 37/445 (8%)

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLF--HIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
             L++Y   + +    + + ++    L    I +  +G+  W   G+K+ + L   +  +
Sbjct: 1   MRLSRYFLPVLKENPSEAQIVSHRYMLRAGMIKQSSAGIYSWLPLGFKVLKKLEGIVHEE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +   +  +  P +    LW++SG +D Y   M  V+      +  R     P       
Sbjct: 61  QQRAGHMPMLMPTIQSADLWRESGRYDDYGQEMLRVED-----RHGRDMLFTPTAEELIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNEC 404
            +F   + SY++LP+ + +    +R+E      G+MR R F   D + F  TKE   +  
Sbjct: 116 DIFRAHVSSYKDLPLTMYQIQWKFRDEIRPRF-GVMRGREFYMKDGYNFDLTKEDALHAY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNS----SQ 460
            +     +  Y+  G + I ++    P     +      AE     V      +      
Sbjct: 175 NRHLVTYLRTYERMGLQAIPMRADGGPIGGDYTHEFLVLAETGESEVFYDSAVTDLTFGD 234

Query: 461 DRINT-------GVLLGEGAFYGPKFEYILKDAIG-----RDWQCGTI---QVDFNLPSR 505
             I+        GVL    + Y    E   +         R      I   Q+ +     
Sbjct: 235 REIDYDNVEQCQGVLEEFTSKYARTDETHDEALFNQVPEERRRVARGIEVGQIFYFGTKY 294

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGNLPLWL---SPIQAIVTTI 560
            +A           P  +H    G  + R +G +IE +      +W    +P    +  +
Sbjct: 295 SDALNATVQGPDGKPTPVHMGSHGIGVSRLLGAIIEASHDDKGIIWPEGVTPFHCGIVNL 354

Query: 561 ---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASER 617
                 A     ++   + +  L    D R E    K     +  +P  I  G +     
Sbjct: 355 KQGDDEADAACNQLYAAMTALGLEPLYDDRKERAGGKFATMDLIGLPWRITVGPRGLKNG 414

Query: 618 SIGIRRFGSTTTQKVSLLDAIPILT 642
            + +    +  ++++S  DA+  + 
Sbjct: 415 VVELTSRRTGESEELSPEDAVKKVA 439


>gi|312137261|ref|YP_004004598.1| prolyl-tRNA synthetase [Methanothermus fervidus DSM 2088]
 gi|311224980|gb|ADP77836.1| prolyl-tRNA synthetase [Methanothermus fervidus DSM 2088]
          Length = 466

 Score =  192 bits (488), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 80/426 (18%), Positives = 159/426 (37%), Gaps = 60/426 (14%)

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQ 302
              + ++    ++        G+  W   G+KI + +I  +R+ + +D++E+  P ++ +
Sbjct: 5   SEWYHEILENAEIIDSRYPVKGMHAWLPYGFKIRKKIIETLRKLLDEDHDEVLFPLLIPE 64

Query: 303 HL-WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
               ++S H   +   ++ V       K  R  AL+P +      +F+  ++++++LP++
Sbjct: 65  EELMKESIHIKGFEDEVYWVTHGG-KAKLKRKLALRPTSETAMYPMFSLWIRTHKDLPLK 123

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQD-DAHVFC-TKEQMFNECLKIHNLIISIYKDFG 419
           + +  + +R E       L+R+R  T   +AH    T E    +  K  N+  + +   G
Sbjct: 124 VYQIVNTFRYETK-HTRPLIRIREITTFKEAHTVHKTLEGAEKQVKKAINIYKTFFDSLG 182

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
              ++ K              WD                             GA Y   F
Sbjct: 183 IPYLITKRPE-----------WDKF--------------------------PGAVYTIAF 205

Query: 480 EYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           + ++ D  GR  Q GTI  +  N    F+  +     +  H    ++  +G  +R I  +
Sbjct: 206 DTLMPD--GRTLQIGTIHNLGQNFSKTFDITFETEEGKHEHA---YQTCYGVSDRVIASV 260

Query: 539 IENFKGNLPLWLSPIQAIVTTIT---------SSAVEYAQEIANLLKSHHLSIETDFRNE 589
           I        L L P  A +  +             +E+ + +   LK   L +  D R+ 
Sbjct: 261 ISIHGDEKGLCLPPKIAPIQIVIVPIIFKETEEEVLEFCKNVEKKLKEGKLKVHLDDRDI 320

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD-AIPILTK--ESL 646
               K  E  +K IP+ I  G K+  +  + + R  S     V   D  +  +    E +
Sbjct: 321 RAGRKFYEWEMKGIPLRIEIGPKDIEKNKVVVVRRDSGEKMDVKFDDNFVENIKSIIEKM 380

Query: 647 PPDCQK 652
             D +K
Sbjct: 381 NNDMRK 386


>gi|163745976|ref|ZP_02153335.1| prolyl-tRNA synthetase [Oceanibulbus indolifex HEL-45]
 gi|161380721|gb|EDQ05131.1| prolyl-tRNA synthetase [Oceanibulbus indolifex HEL-45]
          Length = 446

 Score =  192 bits (487), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 78/446 (17%), Positives = 152/446 (34%), Gaps = 38/446 (8%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  L        E++   HR + R      I +  +G+  W   G+K+ + +   + ++
Sbjct: 4   SQYFLPVLKENPAEAQIVSHRLMLRAGM---IKQSSAGIYSWLPLGYKVLRKVEEIVHQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +   +  +  P +    LW++SG +D+Y   M  ++   D     R     P N     
Sbjct: 61  QQRVGHIPMLMPTLQSADLWKESGRYDAYGPEMLRIRDRQD-----RDMLYGPTNEEMIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNEC 404
            +F   + SY++LP+ L      +R+E      G+MR R F   D + F  TKE   +  
Sbjct: 116 DIFRSHVGSYKDLPLTLYHIQWKFRDEIRPRF-GVMRGREFLMKDGYNFDLTKEDALHAY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            +     +  Y+  G + I ++  + P     +      AE     V    + +     N
Sbjct: 175 NRHLVSYLRTYERMGLQAIPMRADSGPIGGDDTHEFLVLAETGESEVFYDSEITDLTFGN 234

Query: 465 TGVLLGEG-----------AFYGPKFEYILKDAIG-----RDWQCGTI---QVDFNLPSR 505
             +   +            + Y    E    +        R      I   Q+ +     
Sbjct: 235 REIDPSDHDACRAVLDEFTSRYARTDETHDPELFAKVPEERQRTARGIEVGQIFYFGTKY 294

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGNLPLWL---SPIQAIVTTI 560
            +A            V +H    G  + R +G +IE +      +W    +P  A +  +
Sbjct: 295 SDAMNAKVQGPDGKQVPVHMGSHGIGVSRLLGAIIEASHDDKGIIWPEGVTPFHAGIVNL 354

Query: 561 ---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASER 617
                 A    + +   LK+  L    D R      K     +  +P  I  G +     
Sbjct: 355 KQGDDEADAACEALYKSLKALGLDPLYDDRKGGAGMKFATMDLIGLPWRITVGPRGLKNG 414

Query: 618 SIGIRRFGSTTTQKVSLLDAIPILTK 643
            + +    +  ++++    A+  L K
Sbjct: 415 VVELTSRRTGESEELPPEQAVEKLAK 440


>gi|58584338|ref|YP_197911.1| prolyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of Brugia
           malayi]
 gi|81311670|sp|Q5GTK5|SYP_WOLTR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|58418654|gb|AAW70669.1| Prolyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of Brugia
           malayi]
          Length = 425

 Score =  192 bits (487), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 94/441 (21%), Positives = 160/441 (36%), Gaps = 46/441 (10%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  L         +    H+   R   +  IA   SG+  W   G ++ + +   +R +
Sbjct: 4   SQYYLPTLKEKPAHARIISHQYSLRAGLIKQIA---SGIYTWLPLGLRVLKNIEGIIRDE 60

Query: 287 IK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E   P V    LW++SG +D Y   M  ++      +        P +     
Sbjct: 61  MNKSGAIEALMPCVQPASLWRESGRYDDYGKTMLRIRD-----RHEEDMLFGPTHEEVAT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNEC 404
            +    +KSY+ LP+ L +    +R+E     +G+MR R F   DA+ F    E   N  
Sbjct: 116 DLIRDIVKSYKNLPLCLYQIQWKFRDEVRPR-YGVMRGREFLMKDAYSFNVNYESALNSY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
             ++   I I+K  G   I V+  T       S             +L +   S+    N
Sbjct: 175 NLMYKTYIKIFKRMGLIPIGVRADTGLIGGNLSHEFH---------ILASTGESTLYYDN 225

Query: 465 --TGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK----- 517
               +L  E      K  Y + D I     C   Q   N+       ++    +K     
Sbjct: 226 KFFELLESEDVK-SLKSIYAVADDIHDPKTCPVPQEQLNVSKGIEIGHIFYFGDKYSKPM 284

Query: 518 --------CHPVMIHRAVFGS-IERFIGIMIENFKGN----LPLWLSPIQAIVTTITSSA 564
                      V IH   +G  + R +G +IE F  +     P  ++P +  +  + +  
Sbjct: 285 NAKVTAQDGKNVNIHMGSYGIGVSRLVGAIIEAFHDDKGITWPEAVAPFRVGLINLQTKT 344

Query: 565 VEY---AQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
            EY   A +I + LKS    +  D    +I  K  +  +  +P  II G K  SE  I I
Sbjct: 345 AEYVEIANKIYSTLKS--DEVLYDDTEGSIGVKFAKMDLIGLPWQIIVGKKAVSENIIEI 402

Query: 622 RRFGSTTTQKVSLLDAIPILT 642
           +   +   ++V + +AI    
Sbjct: 403 KNRATGKVEEVQIEEAINYFN 423


>gi|88607069|ref|YP_505231.1| prolyl-tRNA synthetase [Anaplasma phagocytophilum HZ]
 gi|114152168|sp|Q2GK70|SYP_ANAPZ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|88598132|gb|ABD43602.1| prolyl-tRNA synthetase [Anaplasma phagocytophilum HZ]
          Length = 426

 Score =  191 bits (486), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 74/402 (18%), Positives = 146/402 (36%), Gaps = 25/402 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRA 316
           +++  SG+      G  + + + + +R +I    + EI  P +    LW++S  +DSY  
Sbjct: 32  VSQTASGIYTLLPLGLMVLRKVENIIREEINAVGFSEILMPTMQPADLWKESQRYDSYGQ 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            +  +          R   L P +      +    LKSYR+LPV L +    +R+E    
Sbjct: 92  ELIRIHDRG-----GREMVLGPTHEEVVTDLVRSSLKSYRDLPVNLYQIQWKFRDELRPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
            +G++R R F   DA+ F T  E+       +       +K    + I +K         
Sbjct: 147 -NGILRSREFLMMDAYSFDTDFEKAMKTYDAVFRAYRKAFKRMNLQTIALKADMGAIGGS 205

Query: 436 GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIG------- 488
            S             V    +      +N   +      Y    +   + + G       
Sbjct: 206 VSHEFHVLTPTGESTVYYDERALELSEMNDYGIEELKEVYAATDDMHDEKSCGIAPEDLK 265

Query: 489 --RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE----N 541
             R  + G I  +D       N  + N+       V +     G I R IG +IE    +
Sbjct: 266 TARGIEVGHIFYLDDRYSRTMNVKFCNTDGHSGTHVKMGCYGIG-ISRLIGALIEVFHDD 324

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHL-SIETDFRNETINYKIREHSI 600
                PL ++P +  +  + S   E  + ++  + S        D R++T   K+    +
Sbjct: 325 AGIKWPLSVAPFKVGIVNLFSKNEE-CKRVSERIHSVLPNDSLYDDRDDTPGVKLSRMDL 383

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             +P  +I G+    +  + ++   +   + +S+ D +  ++
Sbjct: 384 IGLPWQVIVGNSFIKDGVLELKNRATGDIELLSVDDVVSRIS 425


>gi|83942873|ref|ZP_00955333.1| prolyl-tRNA synthetase [Sulfitobacter sp. EE-36]
 gi|83845881|gb|EAP83758.1| prolyl-tRNA synthetase [Sulfitobacter sp. EE-36]
          Length = 446

 Score =  191 bits (486), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 75/436 (17%), Positives = 147/436 (33%), Gaps = 38/436 (8%)

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEI 294
               E++   HR + R      I +  +G+  W   G+K+ + + + +  + +   +  +
Sbjct: 13  ENPSEAQIVSHRLMLRAGM---IKQSAAGIYSWLPLGFKVLRKIETIVHEEQQRAGHIPM 69

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
             P +    LW++SG +D+Y   M  +K   D     R     P N      +F   + S
Sbjct: 70  LMPTLQSADLWKESGRFDAYGPEMLRIKDRQD-----RDMLYGPTNEEMITDIFRSHVGS 124

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIIS 413
           Y++LP+ L      +R+E      G+MR R F   D + F  TKE   +   +     + 
Sbjct: 125 YKDLPMTLYHIQWKFRDEVRPRF-GVMRGREFLMKDGYTFDLTKEDALHAYNRHLVTYLR 183

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIK----NSSQDRINT---- 465
            Y+  G + I ++  + P     +      AE     V    +          I+     
Sbjct: 184 SYERMGLQAIPMRADSGPIGGDDTHEFLVLAETGESEVFYDSQITELKFGDREIDYDSVD 243

Query: 466 ---GVLLGEGAFYGPKFEYILKD-----AIGRDWQCGTI---QVDFNLPSRFNAFYVNSH 514
               V+    + Y    E   +         R      I   Q+ +              
Sbjct: 244 QCQAVMEEFTSRYARTDETHDEALFAEVPAERQRSARGIEVGQIFYFGTKYSEPMGATVQ 303

Query: 515 SEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGNLPLWL---SPIQAIVTTI--TSSAVEY 567
                PV +H    G  + R +G +IE +      +W    +P    +  +       + 
Sbjct: 304 GPDGKPVPVHMGSHGIGVSRLLGAIIEASHDDKGIIWPEGVTPFHVGIVNLKQGDEQADA 363

Query: 568 A-QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS 626
           A   +   L++  L    D   E    K     +  +P  I  G +      + +    +
Sbjct: 364 ACNALYASLQALGLDPLYDDTKERAGGKFATMDLIGLPWRITVGPRGLKNGVVELTSRRT 423

Query: 627 TTTQKVSLLDAIPILT 642
             +++++   AI  + 
Sbjct: 424 GESEEMTPEAAIEKIA 439


>gi|251772092|gb|EES52662.1| prolyl-tRNA synthetase [Leptospirillum ferrodiazotrophum]
          Length = 429

 Score =  191 bits (486), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 88/420 (20%), Positives = 149/420 (35%), Gaps = 28/420 (6%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            T+     +     E+E   HR + R   +  +A        +   G ++ + +   +R 
Sbjct: 3   TTRLPYVTFHEDPAEAETVSHRLMLRGGYVRKVAGGLYD---FLPFGARVLRRVERIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      EI  P +    +W+++G W+ Y   +F +    D     R+FAL P +    
Sbjct: 60  EMDRAGAFEILMPALQPAEMWEKTGRWEKYGKELFRLTDRHD-----RSFALGPTHEEVV 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             + +  L SYR+LPV L +  + +R+E      GLMR R F   DA+ F   ++   EC
Sbjct: 115 TELASGLLNSYRQLPVTLYQIQTKFRDEMRPRF-GLMRGREFVMKDAYSFARSKEEGAEC 173

Query: 405 LKIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            +I       I+   G    MV+  T       S      A +      DT+      R 
Sbjct: 174 YRIMQEAYFRIFARLGLSVRMVEADTGNIGGYSSHEFMVLAPSGE----DTVVFCGSCRY 229

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
            + V L   A + P    + +  + R        V                       + 
Sbjct: 230 ASNVELAGAATHCP----LCQAPLERTTAIEVGHVFDLGDRYSAPMEAGFLDPDGRETLF 285

Query: 524 HRAVFGS-IERFIGIMIENFKGN----LPLWLSPIQAIVTTIT---SSAVEYAQEIANLL 575
           H   +G  + R +   IE    +     P  ++P    V  +    +   E A  IA LL
Sbjct: 286 HMGCYGIGVSRLLAAAIEQSHDDAGIIWPTAMAPFAVAVLPLGGRDAELSEKALRIAGLL 345

Query: 576 KSHHL-SIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           +      +  D R+     K  +  +   PI +I G+K   E    I+   S     V L
Sbjct: 346 EERFPEEVLVDDRDLRAGVKFADADLCGFPIQVILGEKGLRENRAEIKVRSSGERNTVDL 405


>gi|34580554|ref|ZP_00142034.1| prolyl-tRNA synthetase [Rickettsia sibirica 246]
 gi|28261939|gb|EAA25443.1| prolyl-tRNA synthetase [Rickettsia sibirica 246]
          Length = 426

 Score =  191 bits (486), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 84/433 (19%), Positives = 156/433 (36%), Gaps = 28/433 (6%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  L        E++   H+ + R   +    +  +G+  W   G K+ + +   +R  
Sbjct: 4   SKYFLPVLKEEPSEAQVTSHKLMLRSGMIR---QQAAGIYTWLPLGLKVLKNIEHIVRLN 60

Query: 287 IK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P +   HLW +SG +D+Y   M   +   D           P N    +
Sbjct: 61  MNKAGALEVLMPCIQPAHLWMESGRFDNYGKEMLKFQDRHDNT-----LLFGPTNEDMIM 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +F H +KSY++LP  L      +R+E      G+MR R F   DA+ F   E+   +  
Sbjct: 116 DIFRHNIKSYKDLPKNLYHIQWKFRDEIRPRF-GVMRGREFLMKDAYSFDINEENAVKTY 174

Query: 406 -KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMK--------GVLDTIK 456
            +++   I+ ++D G   I V     P     S      AE             +L    
Sbjct: 175 NQMYKAYINAFRDLGVFVIPVIADNGPIGGNLSHEFHVIAETGESTIYYDKKFKILKDNP 234

Query: 457 NSSQDRINTGVLLGEGAFYGPKFEYILKD-AIGRDWQCGTIQVDFNLPSRFNAFYVNSHS 515
           +   + I +     E  +   K     ++    +  + G I    +  S      +N   
Sbjct: 235 DIDVEEIKSWYAAAEEKYEVNKLPISEQEITSSKGIEVGHIFYIGSKYSVNMNALINDEY 294

Query: 516 EKCHPVMIHRAVFGSIERFIGIMIE-NFKGNLPLWL---SPIQAIVTTIT---SSAVEYA 568
            K  P+ +     G I R +  +IE N      +W    +P +  +  +    S  VE A
Sbjct: 295 GKLTPIEMSSYGIG-ISRLVAAIIEANCDEKGIIWPSSVAPFKVSLINLNIHDSKCVELA 353

Query: 569 QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
                 L   ++ +  D        K   H +   P  II G K+A+   + ++   S  
Sbjct: 354 DMAYKELSDKNIEVLYDDTEARPGSKFATHDLIGSPHQIIIGPKKAANNIVELKDRKSGV 413

Query: 629 TQKVSLLDAIPIL 641
            + + +   + +L
Sbjct: 414 IEDIEVGSLMSVL 426


>gi|259416086|ref|ZP_05740006.1| prolyl-tRNA synthetase [Silicibacter sp. TrichCH4B]
 gi|259347525|gb|EEW59302.1| prolyl-tRNA synthetase [Silicibacter sp. TrichCH4B]
          Length = 451

 Score =  191 bits (486), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 74/445 (16%), Positives = 155/445 (34%), Gaps = 37/445 (8%)

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLF--HIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
             L++Y   + +    + + ++    L    I +  +G+  W   G+++ + +   +  +
Sbjct: 1   MRLSRYFLPVLKETPSEAQVVSHRYMLRAGMIKQSAAGIYSWLPLGYRVLKKIEGIVHEE 60

Query: 287 -IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            ++  +  +  P +    LW++SG +D+Y   M  ++   D     R     P       
Sbjct: 61  QMRAGHIPMLMPTIQSADLWRESGRYDAYGEEMLRIRDRHD-----RDMLFTPTAEELIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNEC 404
            +F   + SY++LP+ + +    +R+E      G+MR R F   D + F  TKE   +  
Sbjct: 116 DIFRSNVSSYKDLPLTMYQIQWKFRDEIRPRF-GVMRGREFYMKDGYNFDLTKEDALHAY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNS----SQ 460
            +     +  Y+  G + I ++    P     +      AE     V    + +      
Sbjct: 175 NRHLVTYLRTYERMGLQAIPMRADGGPIGGDYTHEFLVLAETGESEVFYDSEITDLSFGA 234

Query: 461 DRINT-------GVLLGEGAFYGPKFEYILKDAIG-----RDWQCGTI---QVDFNLPSR 505
             I+         VL    + Y    E   +         R      I   Q+ +     
Sbjct: 235 REIDYDSVEQCQAVLEEFTSRYARTDETHDEALFNAVPEDRRRVARGIEVGQIFYFGTKY 294

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGNLPLWL---SPIQAIVTTI 560
             A      + +   V +H    G  + R +G +IE +      +W    +P    +  +
Sbjct: 295 SEALGATVQTAEGDSVPVHMGSHGIGVSRLLGAIIEASHDDKGIIWPEGVTPFHCGIVNL 354

Query: 561 ---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASER 617
                 A    +++   L +  L    D R E    K     +  +P  I  G +     
Sbjct: 355 KQGDDEADAACEQLYAALTAIGLEPLYDDRKERAGGKFASMDLIGLPWRITVGPRGLKNG 414

Query: 618 SIGIRRFGSTTTQKVSLLDAIPILT 642
            + +    S  ++++S  DA+  + 
Sbjct: 415 VVEVTSRRSGESEEMSPEDAVKKIA 439


>gi|20094665|ref|NP_614512.1| prolyl-tRNA synthetase [Methanopyrus kandleri AV19]
 gi|74580679|sp|Q8TW09|SYP_METKA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|19887826|gb|AAM02442.1| Prolyl-tRNA synthetase [Methanopyrus kandleri AV19]
          Length = 485

 Score =  191 bits (485), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 77/424 (18%), Positives = 162/424 (38%), Gaps = 56/424 (13%)

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
              + ++ R  ++  +     G+  W   G++I Q ++  +RRK+++  +EE+  P ++ 
Sbjct: 22  SEWYAEVLRSAEIMDVRYPVKGMYVWLPYGFEIRQRVVEKLRRKLRETGHEEVLFPTLIP 81

Query: 302 QHL-WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +    ++S H   +   ++ V        D +  AL+P +      +F   ++S+ +LP+
Sbjct: 82  ETQLKKESEHIAGFEDEVYWVTHGGLKELDEK-LALRPTSETAIYPMFALWIRSHADLPL 140

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           ++ +  + +R E       L+R+R  T                              F  
Sbjct: 141 KIFQIVNTFRYETK-HTRPLIRMREIT-----------------------------TFKE 170

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
                      E++V       +A  I     D +       +        GA Y   F+
Sbjct: 171 AHTAHATEEEAEEQV------KEAVEIYSSFFDELGIPYIASVRPEWDKFPGAEYTVAFD 224

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI- 539
            ++ D  GR  Q GT+ +     +R   F V   +E+     ++   +G  +R +  MI 
Sbjct: 225 TLMPD--GRTLQIGTVHMLGQNFAR--TFEVTYETEEGDQEYVYMTCYGISDRVVASMIA 280

Query: 540 ---ENFKGNLPLWLSPIQAIVTTITS-----SAVEYAQEIANLLKSHHLSIETDFRNETI 591
              +     LP  ++P Q ++  I         +E A E+  +L+   + ++ D R+ + 
Sbjct: 281 IHGDERGLVLPPDVAPYQVVMVPILKKGVRRKILERAAEVEEMLREEGVRVKVDDRDMSP 340

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL---DAIPILTKESLPP 648
             K     +K +P+ I  G +E  E +  + R      +  +     D +P L  E +  
Sbjct: 341 GRKFHYWELKGVPLRIELGARELEEGTAVVFRRDELERETYAFEELPDVVPELL-EDIAM 399

Query: 649 DCQK 652
           + +K
Sbjct: 400 ELRK 403


>gi|83949530|ref|ZP_00958263.1| prolyl-tRNA synthetase [Roseovarius nubinhibens ISM]
 gi|83837429|gb|EAP76725.1| prolyl-tRNA synthetase [Roseovarius nubinhibens ISM]
          Length = 452

 Score =  191 bits (485), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 78/434 (17%), Positives = 150/434 (34%), Gaps = 38/434 (8%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
            E++   HR + R      I +  +G+  W   G+K+ + + + +  + +   +  +  P
Sbjct: 16  SEAQIVSHRLMLRAGM---IKQSSAGIYSWLPLGYKVLRNIETIVHEEQQRVGHIPMLMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW++SG +D+Y   M  ++   D     R     P N      +F   + SY++
Sbjct: 73  TLQSADLWRESGRYDAYGPEMLRIRDRQD-----RDMLFGPTNEEMITDIFRSHVSSYKD 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYK 416
           LP+ L      +R+E      G+MR R F   D + F  TKE   +   +     +  Y+
Sbjct: 128 LPLTLYHIQWKFRDEIRPRF-GVMRGREFLMKDGYNFDLTKEDALHAYNRHLVSYLRTYE 186

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNS----SQDRINT------- 465
             G + I ++  + P     +      AE     V    + +     +  I+        
Sbjct: 187 RMGLQAIPMRADSGPIGGDDTHEFLVLAETGESEVFYDSEITDLTFGEREIDHDSHEACQ 246

Query: 466 GVLLGEGAFYGPKFEYILKDAIG-----RDWQCGTI---QVDFNLPSRFNAFYVNSHSEK 517
            VL    + Y    E   +         R      I   Q+ +                 
Sbjct: 247 AVLEEFTSRYARTDETHDEALFNQIPEERRRVARGIEVGQIFYFGTKYSEPMGATVQGPD 306

Query: 518 CHPVMIHRAVFGS-IERFIGIMIENFKGN----LPLWLSPIQAIVTTITSSAVEYAQE-- 570
             PV +H    G  + R +G +IE    +     P  ++P    +  +     E      
Sbjct: 307 GKPVPVHMGSHGIGVSRLLGAIIEASHDDKGIIWPEAVAPFHVGIVNLKQGDDEADAACD 366

Query: 571 -IANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
            +   + +  L    D RNE    K     +  +P  I  G +      + +    +  +
Sbjct: 367 ALYAQVAALGLEPLYDDRNERAGGKFATMDLIGLPWRITVGPRGLKNGVVELTSRRTGES 426

Query: 630 QKVSLLDAIPILTK 643
           +++S   AI  L +
Sbjct: 427 EELSPEAAIAKLKE 440


>gi|83954043|ref|ZP_00962763.1| prolyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1]
 gi|83841080|gb|EAP80250.1| prolyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1]
          Length = 446

 Score =  191 bits (485), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 74/436 (16%), Positives = 147/436 (33%), Gaps = 38/436 (8%)

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEI 294
               E++   HR + R      I +  +G+  W   G+K+ + + + +  + +   +  +
Sbjct: 13  ENPSEAQIVSHRLMLRAGM---IKQSAAGIYSWLPLGFKVLRKIETIVHEEQQRAGHIPM 69

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
             P +    LW++SG +D+Y   M  +K   D     R     P N      +F   + S
Sbjct: 70  LMPTLQSADLWKESGRFDAYGPEMLRIKDRQD-----RDMLYGPTNEEMITDIFRSHVGS 124

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIIS 413
           Y++LP+ L      +R+E      G+MR R F   D + F  TKE   +   +     + 
Sbjct: 125 YKDLPMTLYHIQWKFRDEVRPRF-GVMRGREFLMKDGYTFDLTKEDALHAYNRHLVTYLR 183

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIK----NSSQDRINT---- 465
            Y+  G + I ++  + P     +      AE     V    +          I+     
Sbjct: 184 SYERMGLQAIPMRADSGPIGGDDTHEFLVLAETGESEVFYDSQITELKFGDREIDYDSVD 243

Query: 466 ---GVLLGEGAFYGPKFEYILKD-----AIGRDWQCGTI---QVDFNLPSRFNAFYVNSH 514
               V+    + Y    E   +         R      I   Q+ +              
Sbjct: 244 QCQAVMEEFTSRYARTDETHDEALFAEVPAERQRSARGIEVGQIFYFGTKYSEPMGATVQ 303

Query: 515 SEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGNLPLWL---SPIQAIVTTI--TSSAVEY 567
                PV +H    G  + R +G +IE +      +W    +P    +  +       + 
Sbjct: 304 GPDGKPVPVHMGSHGIGVSRLLGAIIEASHDDKGIIWPEGVTPFHVGIVNLKQGDEQADA 363

Query: 568 A-QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS 626
           A   +   L++  L    D   E    K     +  +P  I  G +      + +    +
Sbjct: 364 ACDALYASLQALGLDPLYDDTKERAGGKFATMDLIGLPWRITVGPRGLKNGVVELTSRRT 423

Query: 627 TTTQKVSLLDAIPILT 642
             +++++   A+  + 
Sbjct: 424 GESEEMTPEAAVEKIA 439


>gi|126463194|ref|YP_001044308.1| prolyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029]
 gi|221640237|ref|YP_002526499.1| prolyl-tRNA synthetase [Rhodobacter sphaeroides KD131]
 gi|166980147|sp|A3PMH0|SYP_RHOS1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|254782913|sp|B9KLX3|SYP_RHOSK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|126104858|gb|ABN77536.1| prolyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029]
 gi|221161018|gb|ACM01998.1| Prolyl-tRNA synthetase [Rhodobacter sphaeroides KD131]
          Length = 445

 Score =  191 bits (484), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 81/449 (18%), Positives = 163/449 (36%), Gaps = 43/449 (9%)

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLF--HIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
             L++Y   + +    + + ++    L    I +  +G+  W   G+K+ + +   +  +
Sbjct: 1   MRLSRYFLPVLKENPSEAQIVSHRYMLRAGMIKQQAAGIYSWLPLGFKVLKRIEQIVHEE 60

Query: 287 -IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            I+  +  +  P +    LW++SG +D Y   M  +     T +  R     P N     
Sbjct: 61  QIRAGHIPLLMPTLQPADLWRESGRYDDYGEEMLRI-----TDRHKRDMLYGPTNEEMIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +F   + SY++LP+ L      +R+E      G+MR R F   D + F    E   +  
Sbjct: 116 DIFRSHVSSYKDLPLTLYHIQWKFRDEIRPRF-GVMRGREFLMKDGYNFDLDYESAIHAY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL-----WDDAENIMKGVLDTIK--- 456
            +     +  Y+  G + I ++ ++ P     +          ++E      +  +K   
Sbjct: 175 NRHMVSYLRTYERMGLQAIPMRAASGPIGGDNTHEFLVLASTGESEVFYDAAITDLKFGD 234

Query: 457 --NSSQDRINTGVLLGE-GAFYGPKFEYILKDAIG----------RDWQCGTIQV-DFNL 502
              +  DR     ++ E  A Y    E   +   G          R  + G I       
Sbjct: 235 RVVNYDDRAECEAIVKEWTAPYARTDETHDEAVFGQIPEERRRSSRGIEVGQIFYFGTKY 294

Query: 503 PSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGNLPLWL---SPIQAIV 557
                A  V +   +   V +H    G  + R +G +IE +      +W    +P  A +
Sbjct: 295 SEPMGATVVTADGSR---VPVHMGSHGIGVSRLLGAIIEASHDDKGIIWPEGVTPFHAGI 351

Query: 558 TTI--TSSAVEYAQE-IANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
             +    S+ + A E +   L +  L    D R+E    K     +  +P  I  G +  
Sbjct: 352 VNLKQGDSSTDLACEALYRDLSARGLEPLYDDRDERAGAKFATMDLIGLPWRITVGPRGI 411

Query: 615 SERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           S   + +    +  ++++S   A+  L +
Sbjct: 412 SAGKVELTNRRTGESEEMSSGAAVDRLAQ 440


>gi|157964462|ref|YP_001499286.1| prolyl-tRNA synthetase [Rickettsia massiliae MTU5]
 gi|157844238|gb|ABV84739.1| Prolyl-tRNA synthetase [Rickettsia massiliae MTU5]
          Length = 437

 Score =  191 bits (484), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 85/427 (19%), Positives = 156/427 (36%), Gaps = 30/427 (7%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  L        E++   H+ + R   +    +  +G+  W   G K+ + + + +R  
Sbjct: 13  SKYFLPVLKEEPSEAQVTSHKLMLRSGMIR---QQAAGIYTWLPLGLKVLKNIENIVRLN 69

Query: 287 IK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      EI  P +   HLW +SG +D+Y   M   +   D           P N     
Sbjct: 70  MNKAGALEILMPCIQPAHLWMESGRFDNYGKEMLKFQDRHDNT-----LLFSPTNEDMIT 124

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +F H +KSY++LP  L      +R+E      G+MR R F   DA+ F   E+   +  
Sbjct: 125 DIFRHNIKSYKDLPKNLYHIQWKFRDEIRPRF-GVMRGREFLMKDAYSFDINEENAVKTY 183

Query: 406 -KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            +++   I+ ++D G   I V     P     S      AE     +    K  +    N
Sbjct: 184 NQMYKAYINAFRDLGVFAIPVIADNGPIGGNLSHEFHIIAETGESTIYYDKKFKTLKD-N 242

Query: 465 TGVLLGE-GAFYGPKFEYILKDAI---------GRDWQCGTIQVDFNLPSRFNAFYVNSH 514
             + + E  ++Y    E    + +          +  + G I    +  S      +N  
Sbjct: 243 PDIDVEEIKSWYAAAEEKHEVNKLPISEQEITSSKGIEVGHIFYIGSKYSVNMNALINDE 302

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNLPLWL---SPIQAIVTTIT---SSAVEY 567
             K  P+ +     G I R +  +IE N      +W    +P +  +  +    S  VE 
Sbjct: 303 HGKLTPIEMSSYGIG-ISRLVAAIIEANCDEKGIIWPSSVAPFKVSLINLNIHDSKCVEL 361

Query: 568 AQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGST 627
           A+     L   ++ +  D        K   H +   P  II G K+A+   + ++   S 
Sbjct: 362 AEMAYKELSDKNIEVLYDDTEARPGSKFATHDLIGSPHQIIIGPKKAANNIVELKDRKSG 421

Query: 628 TTQKVSL 634
             + + +
Sbjct: 422 VIEDIEV 428


>gi|99081693|ref|YP_613847.1| prolyl-tRNA synthetase [Ruegeria sp. TM1040]
 gi|122984229|sp|Q1GFI1|SYP_SILST RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|99037973|gb|ABF64585.1| prolyl-tRNA synthetase [Ruegeria sp. TM1040]
          Length = 451

 Score =  191 bits (484), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 73/448 (16%), Positives = 154/448 (34%), Gaps = 43/448 (9%)

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLF--HIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
             L++Y   + +    + + ++    L    I +  +G+  W   G+++ + +   +  +
Sbjct: 1   MRLSRYFLPVLKETPSEAQVVSHRYMLRAGMIKQSAAGIYSWLPLGYRVLKKIEGIVHEE 60

Query: 287 -IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            ++  +  +  P +    LW++SG +D+Y   M  ++   D     R     P       
Sbjct: 61  QMRAGHIPMLMPTIQSADLWRESGRYDAYGEEMLRIRDRHD-----RDMLFTPTAEELIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNEC 404
            +F   + SY++LP+ + +    +R+E      G+MR R F   D + F  TKE   +  
Sbjct: 116 DIFRANVSSYKDLPLTMYQIQWKFRDEIRPRF-GVMRGREFYMKDGYNFDLTKEDALHAY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNS----SQ 460
            +     +  Y+  G + I ++    P     +      AE     V    + +      
Sbjct: 175 NRHLVTYLRTYERMGLQAIPMRADGGPIGGDYTHEFLVLAETGESEVFYDSEITDLTFGA 234

Query: 461 DRINT-------GVLLGEGAFYGPKFEYILKDAIG----------RDWQCGTIQV-DFNL 502
             I+         VL    + Y    E   +              R  + G I       
Sbjct: 235 REIDYDNVEQCQAVLEEFTSRYARTDETHDEALFNAVPEERRRVARGIEVGQIFYFGTKY 294

Query: 503 PSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGNLPLWL---SPIQAIV 557
                A    +  +    V +H    G  + R +G +IE +      +W    +P    +
Sbjct: 295 SEALGATVQTADGQS---VPVHMGSHGIGVSRLLGAIIEASHDDKGIIWPEGVTPFHCGI 351

Query: 558 TTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
             +      A    +++   L +  L    D R E    K     +  +P  I  G +  
Sbjct: 352 VNLKQGDDEADAACEQLYAALTAIGLEPLYDDRKERAGGKFASMDLIGLPWRITVGPRGL 411

Query: 615 SERSIGIRRFGSTTTQKVSLLDAIPILT 642
               + +    +  ++++S  DA+  + 
Sbjct: 412 KNGVVEVTSRRTGESEEMSPEDAVKKIA 439


>gi|114152886|sp|O28664|SYP_ARCFU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
          Length = 471

 Score =  191 bits (484), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 73/414 (17%), Positives = 157/414 (37%), Gaps = 59/414 (14%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQ 298
           +E+    + ++ +  ++  +     G+  W   G+KI Q + S +R  +  +++E+  P 
Sbjct: 6   KENFSEWYHEVIQTAEIMDVRYPVKGLYVWFPFGFKIRQLVYSKLREIMDREHDEVYFPA 65

Query: 299 VLDQ-HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           ++ +  L ++  H   +   ++ +     T  D++  AL+P +      +F   ++++ +
Sbjct: 66  LIPETELGKEGEHIKGFEDEVYWITHGGLTPLDVK-LALRPTSETAMYPMFRLWVRNHAD 124

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFT-QDDAHVFCTK-EQMFNECLKIHNLIISIY 415
           LP+++ +  + +R E       L+R+R  T   +AH      E+      K        Y
Sbjct: 125 LPLKVYQIVNTFRYETK-HTRPLIRLREITSFKEAHTVHKDFEEAAEHVKKAIGFYKEFY 183

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                  ++++              WD                             GA Y
Sbjct: 184 DFLAIPYMVIRRPE-----------WDKF--------------------------PGAAY 206

Query: 476 GPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
              F+ I+ D  GR  Q GT+  +  N    F+  Y   + E       H+  +G  ER 
Sbjct: 207 TIAFDTIMPD--GRTLQIGTVHHLADNFARTFDIKYEAPNGE---HYYAHQTCYGISERC 261

Query: 535 IGIMI----ENFKGNLPLWLSPIQAIVTTI-----TSSAVEYAQEIANLLKSHHLSIETD 585
           I  +I    ++    LP  ++P+Q ++  I       + +E  +++A  LK+    +  D
Sbjct: 262 IAALISVHGDDLGLVLPFEVAPVQIVIIPILYKGKEEAVMEACRKLAEKLKA--FRVVLD 319

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
              +    K  +  +K +PI    G ++A +    +         +V L +   
Sbjct: 320 EGEDRPGAKYYKWELKGVPIRFEIGPRDAEKGVAVVSFRDEKRKFEVPLDEVDE 373


>gi|163733470|ref|ZP_02140913.1| prolyl-tRNA synthetase [Roseobacter litoralis Och 149]
 gi|161393258|gb|EDQ17584.1| prolyl-tRNA synthetase [Roseobacter litoralis Och 149]
          Length = 451

 Score =  190 bits (483), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 82/446 (18%), Positives = 159/446 (35%), Gaps = 40/446 (8%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           T+  +        E++   HR + R      I ++ +G+  W   G+K+ + L + +  +
Sbjct: 4   TRYFMPVLRENPAEAQIVSHRLMLRAGM---IKQNAAGIYSWLPLGFKVLRKLENIVHEE 60

Query: 287 -IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            I+  +  +  P +    LW++SG +D+Y   M  ++   D     R     P N     
Sbjct: 61  QIRAGHVPMLMPTMQSADLWRESGRYDAYGPEMLRIRDRQD-----RDMLFGPTNEEMIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNEC 404
            +F   + SY++LP+ L      +R+E      G+MR R F   D + F  TKE   +  
Sbjct: 116 DIFRSHVSSYKDLPLTLYHIQWKFRDEMRPRF-GVMRGREFFMKDGYNFDLTKEDALHAY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL-----WDDAENIMKGVLDTIKNSS 459
            +     +  Y+  G + I ++  + P     +          ++E      +  +    
Sbjct: 175 NRHLVSYLRTYERMGLQAIPMRADSGPIGGDDTHEFLVLADTGESEVFYDSAVTDLTFGD 234

Query: 460 QDRINT-------GVLLGEGAFYGPKFEYI---LKDAIGRDWQCGTIQVDFNLPSRFNAF 509
           +D I+        GV+      Y    E     L DAI  + Q     ++      F   
Sbjct: 235 RD-IDYDSVAQCQGVMEEFTNLYARTDETHDQALFDAIPAERQRKARGIEVGQIFYFGTK 293

Query: 510 YVNSHSEK-----CHPVMIHRAVFGS-IERFIGIMIE-NFKGNLPLWL---SPIQAIVTT 559
           Y ++   K       P  +H    G  + R +G +IE +      +W    +P    +  
Sbjct: 294 YSDAMGAKVQGPDGKPTAVHMGSHGIGVSRLVGAIIEASHDDKGIIWPEGVTPFHCGIVN 353

Query: 560 ITSS---AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASE 616
           +      A      +   L++  L    D R E    K     +  +P  I  G +    
Sbjct: 354 LKQGDAEADAACDALYTSLRALGLDPLYDDRKERAGGKFATMDLIGLPWRITVGPRGLKN 413

Query: 617 RSIGIRRFGSTTTQKVSLLDAIPILT 642
             + +    S  + ++    A+  + 
Sbjct: 414 GVVELTSRKSGESVEMPPEQAVEKIA 439


>gi|255262231|ref|ZP_05341573.1| prolyl-tRNA synthetase [Thalassiobium sp. R2A62]
 gi|255104566|gb|EET47240.1| prolyl-tRNA synthetase [Thalassiobium sp. R2A62]
          Length = 445

 Score =  190 bits (483), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 73/437 (16%), Positives = 152/437 (34%), Gaps = 40/437 (9%)

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEI 294
               +++   HR + R      I +  +G+  W   G+K+ + + + +  +  K  +  +
Sbjct: 13  ENPADAQIVSHRLMLRAGM---IKQSAAGIYSWLPLGYKVLKNIENIVHEEQAKAGHMPM 69

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
             P +    LW++SG +D Y   M  V     T +  R     P        +F   + S
Sbjct: 70  LMPTMQSADLWRESGRYDDYGEEMLRV-----TDRHGRDMLYTPTAEELITEIFRSHVSS 124

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIIS 413
           Y+++P+ L +    +R+E      G+MR R F   D + F  TKE   +   +     + 
Sbjct: 125 YKDMPLTLYQIQWKFRDEIRPRF-GVMRGREFYMKDGYNFDLTKEDALHAYNRHLVSYLR 183

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDAL-----WDDAENIMKGVLDTIKNSSQDRINT--- 465
            Y+  G + I ++  + P     +          ++E      +  +    +D I+    
Sbjct: 184 TYERMGLQAIPMRADSGPIGGDDTHEFLVLADTGESEVFYDSAVTDLSFGDRD-IDFDSV 242

Query: 466 ----GVLLGEGAFYGPKFEYILKDAIG-----RDWQCGTI---QVDFNLPSRFNAFYVNS 513
                ++      Y    E   +         R      I   Q+ +      +A     
Sbjct: 243 DQCAAIMQEFTTKYARTDETHDEAVFNEVPEERRRTARGIEVGQIFYFGTKYSDAMGATV 302

Query: 514 HSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGNLPLWL---SPIQAIVTTITSSAVEY- 567
                 PV +H    G  + R +G +IE +      +W    +P    +  +     +  
Sbjct: 303 QGPDGKPVAVHMGSHGIGVSRLLGAIIEASHDDKGIIWPEGVTPFHVGILNMKQGDEDTD 362

Query: 568 --AQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
              Q I +   +  L    D RNE    K     +  +P  I  G +      + +    
Sbjct: 363 AACQAIYDSFAALGLEPLYDDRNERAGGKFATMDLIGLPWRITVGPRGLKNGVVELTSRR 422

Query: 626 STTTQKVSLLDAIPILT 642
           ++ +++++   A+  + 
Sbjct: 423 TSESEEMTAEQAVEKVA 439


>gi|114764030|ref|ZP_01443271.1| prolyl-tRNA synthetase [Pelagibaca bermudensis HTCC2601]
 gi|114543622|gb|EAU46636.1| prolyl-tRNA synthetase [Roseovarius sp. HTCC2601]
          Length = 445

 Score =  190 bits (482), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 75/446 (16%), Positives = 154/446 (34%), Gaps = 37/446 (8%)

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLF--HIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
             L++Y   + +    + + ++    L    I +  +G+  W   G+K+ + + + +  +
Sbjct: 1   MRLSRYFLPVLKETPAEAQIVSHRYMLRAGMIKQASAGIYSWLPLGYKVLRKIENIIHEE 60

Query: 287 I-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
             +  +  +  P +    LW++SG +D+Y A M  +    D     R     P       
Sbjct: 61  QARAGHIPMLMPTIQSADLWRESGRYDAYGAEMLRITDRHD-----RDMLYTPTAEELIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNEC 404
            +F   + SYR+LP+ + +    +R+E      G+MR R F   D + F  TKE   +  
Sbjct: 116 DIFRANVSSYRDLPLTMYQIQWKFRDEIRPRF-GVMRGREFYMKDGYNFDLTKEDALHAY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIK----NSSQ 460
            +     +  Y+  G + I ++  + P     +      AE     V    +        
Sbjct: 175 NRHLVSYLRTYERMGLQAIPMRADSGPIGGDDTHEFLVLAETGESEVFYDSEITELKFGD 234

Query: 461 DRINT-------GVLLGEGAFYGPKFEYILKDAIG-----RDWQCGTI---QVDFNLPSR 505
             I+         VL    + Y    E   +         R      I   Q+ +     
Sbjct: 235 RAIDYDSVEQCQAVLEEFTSRYARTDETHDEAVFNQVPEARRRTARGIEVGQIFYFGTKY 294

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGNLPLWL---SPIQAIVTTI 560
             A       +  + V +H    G  + R +G +IE +      +W    +P    +  +
Sbjct: 295 SEAMGATVSDKDGNQVPVHMGSHGIGVSRLLGAIIEASHDDRGIIWPEGVTPFHCGIVNL 354

Query: 561 TSSAVEY---AQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASER 617
            +   E      +I   L +  L    D  NE    K     +  +P  I  G +     
Sbjct: 355 KTGDAEADAACDKIHAALIALGLDPLYDDTNERAGAKFATMDLIGLPWRITVGPRGLKNG 414

Query: 618 SIGIRRFGSTTTQKVSLLDAIPILTK 643
            + +    +  ++++    A+  + +
Sbjct: 415 VVELTSRRTGESEELPPEAAVAKIAE 440


>gi|229159541|ref|ZP_04287556.1| Prolyl-tRNA synthetase 2 [Bacillus cereus R309803]
 gi|228623946|gb|EEK80757.1| Prolyl-tRNA synthetase 2 [Bacillus cereus R309803]
          Length = 502

 Score =  190 bits (482), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 87/446 (19%), Positives = 176/446 (39%), Gaps = 60/446 (13%)

Query: 213 NRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKG 272
            R  L  + G      +E  Q +  +EE   + +  + ++ +L   +    G +     G
Sbjct: 13  TRAFLYFLEGGRLTMAKEQVQAITKMEEDFAQWYTDIVKKAELVDYSSVK-GCMILRPYG 71

Query: 273 WKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKD 330
           + +++ +   M  K+K   +E +  P  + + L  ++  H + +   +  V    D    
Sbjct: 72  YALWENMQKVMDEKLKATGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGDEKLA 131

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
            R   ++P +       F+  ++SY +LP    ++ SV R E   +    +R   F   +
Sbjct: 132 ER-LCVRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEK--TTRPFLRTTEFLWQE 188

Query: 391 AH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMK 449
            H +  T E+   E L I NL  S  +D+    ++    T  EK  G+ A +        
Sbjct: 189 GHTIHETAEESQAETLNILNLYASFCEDYLAIPVIKGQKTDKEKFAGAKATY-------- 240

Query: 450 GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNA 508
                                         E ++ D  G+  Q GT      N    F+ 
Sbjct: 241 ----------------------------TIESLMHD--GKALQTGTSHNFGTNFSEAFDI 270

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---T 561
            +++ + +  +   +H+  +G   R IG +I    +N    +P  ++P+Q ++  I    
Sbjct: 271 KFLDRNGKWQY---VHQTSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQVVIVPIAQHK 327

Query: 562 SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
              +E A E+   +++    ++ D  N+T  +K  E+ +K IPI +  G K+  +  + +
Sbjct: 328 EGVLEKATELQGRIQNV-ARVKVDVSNKTPGWKFNEYEMKGIPIRLEVGPKDIEKNQVVL 386

Query: 622 RRFGSTTTQKVS---LLDAIPILTKE 644
            R  +   + +S   L + IP L +E
Sbjct: 387 VRRDTKEKEFISMDQLEERIPSLLEE 412


>gi|48478436|ref|YP_024142.1| prolyl-tRNA synthetase [Picrophilus torridus DSM 9790]
 gi|74579482|sp|Q6KZA3|SYP_PICTO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|48431084|gb|AAT43949.1| prolyl-tRNA synthetase [Picrophilus torridus DSM 9790]
          Length = 466

 Score =  190 bits (482), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 74/414 (17%), Positives = 163/414 (39%), Gaps = 55/414 (13%)

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEE 293
           +   +E+    + ++     L        G+  W   G KI + + + +R  + +  ++E
Sbjct: 1   MENKKENFSEWYNEIIDLAKLSDKRYAIKGMNVWLPYGLKIMRLIDNIIRDNVDNKSFQE 60

Query: 294 INTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           ++ P ++ +   + +  H   +   ++ V        D+   AL+P +      +F   +
Sbjct: 61  VSFPVLITRSQLETEFEHIKGFENEIYWVTKGGSEKLDI-ELALRPTSESAMYTMFPLWI 119

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
           +S+++LP+++ +  SVYR E        +RVR     +AH   T    + +  +  +  +
Sbjct: 120 RSHQDLPLKIYQIVSVYRYETK-HTRSFIRVREIHFFEAH---TAHVDYGDAERQMSEYM 175

Query: 413 SIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
            I+     +  +                WD                             G
Sbjct: 176 DIWSSIAEKLCLPYNIDMRPD-------WDKF--------------------------PG 202

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
           A Y   F+ ++    GR  Q GTI     N    ++  Y++ + +  +   + +  FG  
Sbjct: 203 AKYTLAFDTLMP--SGRSLQIGTIHEYGENFARNYDIKYLDINGDLKY---VSQTTFGLS 257

Query: 532 ERFIGIMI----ENFKGNLPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIE 583
           ER +  +I    ++    LP  ++P+QAI+  I        ++Y+ +I ++LK  ++  E
Sbjct: 258 ERLLAAVIGIHGDDTGLILPASIAPVQAIIIPIPGKSFKEVLDYSGKILSMLKDINVRAE 317

Query: 584 TDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
            D R N T  YK  +  ++ +P+ I  G +E    ++ +    +     +S+ +
Sbjct: 318 IDSRENYTPGYKYNDWEMRGVPLRIEIGSREMESSTVTVVSRLNKKRLNISIKE 371


>gi|77464352|ref|YP_353856.1| prolyl-tRNA synthetase [Rhodobacter sphaeroides 2.4.1]
 gi|114152244|sp|Q3IZS9|SYP_RHOS4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|77388770|gb|ABA79955.1| Prolyl-tRNA synthetase, class IIa [Rhodobacter sphaeroides 2.4.1]
          Length = 445

 Score =  190 bits (482), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 81/449 (18%), Positives = 163/449 (36%), Gaps = 43/449 (9%)

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLF--HIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
             L++Y   + +    + + ++    L    I +  +G+  W   G+K+ + +   +  +
Sbjct: 1   MRLSRYFLPVLKENPSEAQIVSHRYMLRAGMIKQQAAGIYSWLPLGFKVLKRIEQIVHEE 60

Query: 287 -IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            I+  +  +  P +    LW++SG +D Y   M  +     T +  R     P N     
Sbjct: 61  QIRAGHIPLLMPTLQPADLWRESGRYDDYGEEMLRI-----TDRHKRDMLYGPTNEEMIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +F   + SY++LP+ L      +R+E      G+MR R F   D + F    E   +  
Sbjct: 116 DIFRSHVSSYKDLPLTLYHIQWKFRDEIRPRF-GVMRGREFLMKDGYNFDLDYESAIHAY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL-----WDDAENIMKGVLDTIK--- 456
            +     +  Y+  G + I ++ ++ P     +          ++E      +  +K   
Sbjct: 175 NRHMVSYLRTYERMGLQAIPMRAASGPIGGDNTHEFLVLASTGESEVFYDAAITDLKFGD 234

Query: 457 --NSSQDRINTGVLLGE-GAFYGPKFEYILKDAIG----------RDWQCGTIQV-DFNL 502
              +  DR     ++ E  A Y    E   +   G          R  + G I       
Sbjct: 235 RVVNYDDRAECEAIVKEWTAPYARTDETHDEAVFGQIPEERRRSSRGIEVGQIFYFGTKY 294

Query: 503 PSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGNLPLWL---SPIQAIV 557
                A  V +   +   V +H    G  + R +G +IE +      +W    +P  A +
Sbjct: 295 SEPMGANVVTADGSR---VPVHMGSHGIGVSRLLGAIIEASHDDKGIIWPEGVTPFHAGI 351

Query: 558 TTI--TSSAVEYAQE-IANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
             +    S+ + A E +   L +  L    D R+E    K     +  +P  I  G +  
Sbjct: 352 VNLKQGDSSTDLACEALYRDLSARGLEPLYDDRDERAGAKFATMDLIGLPWRITVGPRGI 411

Query: 615 SERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           S   + +    +  ++++S   A+  L +
Sbjct: 412 SAGKVELTNRRTGESEEMSSGAAVDRLAQ 440


>gi|238591358|ref|XP_002392585.1| hypothetical protein MPER_07812 [Moniliophthora perniciosa FA553]
 gi|215458845|gb|EEB93515.1| hypothetical protein MPER_07812 [Moniliophthora perniciosa FA553]
          Length = 210

 Score =  190 bits (482), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 89/217 (41%), Positives = 130/217 (59%), Gaps = 8/217 (3%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-D 289
           +T +  +L E+ KRDHRK+ RE +LF   +   G  FW   G +I+  L+  +R +    
Sbjct: 1   MTAHKEWLAEAAKRDHRKIGREQELFFFNDVSPGSCFWLPHGTRIYNNLVELLRSEYWKR 60

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
            Y+E+ +P + +  LW+ SGHW +Y   MF +        +   +ALKPMNCPGH  +F+
Sbjct: 61  GYQEVISPNMFNTKLWETSGHWQNYTDGMFVLDV------EKEKWALKPMNCPGHCIIFD 114

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
              +SY+ELP+R+AEFG ++RNE SG+L GL RVR F QDD HVFC   Q+  E  ++ +
Sbjct: 115 SRDRSYKELPIRMAEFGIIHRNEASGALTGLTRVRRFVQDDTHVFCMPSQIEEEIGRLFD 174

Query: 410 LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
            +  +Y  FGFE  + +LSTRPE  +G    W+ AE 
Sbjct: 175 FMQHVYGLFGFEFHL-ELSTRPENFLGDIKTWEVAEA 210


>gi|695786|emb|CAA58846.1| orf5 [Zymomonas mobilis]
          Length = 443

 Score =  189 bits (481), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 82/442 (18%), Positives = 146/442 (33%), Gaps = 48/442 (10%)

Query: 234 YLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYE 292
                 +++   H+ + R   +   A   SG+  W   G ++       +R +  +    
Sbjct: 11  MKETPADAQIISHKLMLRAGMIRQTA---SGIYAWLPLGLRVLGRNEKIIREEQARAGAA 67

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +    LW +SG +D+Y   M   K      +        P N     A+  H L
Sbjct: 68  ELLMPTLQTADLWPESGRYDAYGPEMLRFKD-----RHNCELLYGPTNEEMITALIRHNL 122

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM-FNECLKIHNLI 411
           +SY  L          +R+E      G+MR R F   DA+ F   E    +   ++    
Sbjct: 123 QSYAILAGIFYHIQWKFRDEVRPRF-GVMRGREFLMKDAYSFDIDETAGRHNYNRMFVGY 181

Query: 412 ISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
           ++ +   G   I ++  T P     S      A N  + V     +S+ ++    +   E
Sbjct: 182 LNSFSRLGLRAIPMQADTGPIGGDLSHEFIVLAPNGERHV---FYHSNWEQPTRHI---E 235

Query: 472 GAFYGPKF-----------------------EYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
             F  PK                        E    D + +        + F        
Sbjct: 236 ADFDDPKALQSIVNDHISDYAATDEKRDPLREAQAGDKLRQSRGIEVGHIFFFGTKYSKP 295

Query: 509 FYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN----LPLWLSPIQAIVTT---I 560
                      P+ I    +G  I R +G +IE    +     P  ++P    +      
Sbjct: 296 MGFTLPGPDGKPIPIQMGSYGIGISRLLGAIIEASHDDNGIIWPEAVAPYHVGLINLRID 355

Query: 561 TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
             +    A  +   L++  +    D RNE    K     +  +P  ++ G K A +  I 
Sbjct: 356 DENCRAIADSLYQRLEAAGIDTLYDDRNERGGAKFATMDLIGLPWQVVIGPKGAEKGVIE 415

Query: 621 IRRFGSTTTQKVSLLDAIPILT 642
           ++   S   Q +S+ DA  +LT
Sbjct: 416 LKNRASGEKQTISVEDAFNLLT 437


>gi|147918785|ref|YP_687490.1| prolyl-tRNA synthetase [uncultured methanogenic archaeon RC-I]
 gi|121690208|sp|Q0W0C9|SYP_UNCMA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|110622886|emb|CAJ38164.1| prolyl-tRNA synthetase [uncultured methanogenic archaeon RC-I]
          Length = 474

 Score =  189 bits (481), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 73/414 (17%), Positives = 152/414 (36%), Gaps = 57/414 (13%)

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK 288
            E        +++    + +L     +  +     GV  W+  G+ I + + + +R  + 
Sbjct: 1   MEEESKSLPSKDNFSEWYNELLMTAQIMDVRYPIKGVYVWYPFGFSIRKKVYNMLRNLLD 60

Query: 289 DDYEEINTPQVLDQ-HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
            D++E   P ++ +  L ++S H   +   ++ V     +  ++   AL+P +      +
Sbjct: 61  VDHQETYFPMLIPKPELLKESEHIKGFEDEVYWVTHGGLSELEV-PLALRPTSETAIYPM 119

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT-QDDAHV-FCTKEQMFNECL 405
           +   ++S+ +LP++L +  + +R E       L+R+R  T   +AH    T +    +  
Sbjct: 120 YKLWIRSHADLPLKLYQIVNTFRYETK-HTRPLIRLREITSFKEAHTAHATWDDAEKQVH 178

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
           +  +L    +       I+ K              WD                       
Sbjct: 179 EAMDLYSEFFTKLAVPFIVHKRPE-----------WDKF--------------------- 206

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF-NAFYVNSHSEKCHPVMIH 524
                 GA Y   F+ ++ D  G+  Q GT+    +L ++F   + +    EK     ++
Sbjct: 207 -----PGADYTMAFDTMMPD--GKSLQVGTVH---HLGTKFAKTYDITYEDEKGERQYVN 256

Query: 525 RAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTTI-----TSSAVEYAQEIANLL 575
           +  +G  ER I  +I     N  L L P     Q ++  I          E  Q++  LL
Sbjct: 257 QTCYGISERCIAAVIGIHGDNKGLVLPPNASQTQVVIIPIIFKKDDGGVKEACQKVKELL 316

Query: 576 KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           +++ +    D  +E    K  +  +K  P  I  G ++    S+ + R      
Sbjct: 317 RANDIVAVIDDADERPGAKYYKWEMKGTPFRIEIGPRDIKNNSVMLVRRDGKKE 370


>gi|260430967|ref|ZP_05784938.1| prolyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157]
 gi|260414795|gb|EEX08054.1| prolyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157]
          Length = 446

 Score =  189 bits (481), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 78/438 (17%), Positives = 151/438 (34%), Gaps = 40/438 (9%)

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEI 294
               E++   HR + R      I +  +G+  W   G+K+ + L + +  + I+  +  I
Sbjct: 13  ENPSEAQIVSHRLMLRAGM---IKQAAAGIYSWLPLGFKVLRKLENIVHEEQIRAGHIPI 69

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
             P +    LW++SG +D Y   M  +K      +  R     P        +F   + S
Sbjct: 70  QMPILQSADLWRESGRYDDYGQEMLRMKD-----RHGRDMLYTPTAEELVTDIFRGHVSS 124

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIIS 413
           Y++LP+ L +    +R+E      G+MR R F   D + F  TKE   +   +     + 
Sbjct: 125 YKDLPLTLYQIQWKFRDEIRPRF-GVMRGREFYMKDGYNFDLTKEDALHAYNRHLVSYLR 183

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDAL-----WDDAENIMKGVLDTIKNSSQDRINT--- 465
            Y+  G + I ++  + P     +          ++E      +  I+   Q  I+    
Sbjct: 184 TYERMGLQAIPMRADSGPIGGDDTHEFLVLADTGESEVFYDSAVTDIRL-GQRDIDYDDK 242

Query: 466 ----GVLLGEGAFYGPKFEYILKDAIG-----RDWQCGTI---QVDFNLPSRFNAFYVNS 513
                ++    + Y    E   +         R      I   Q+ +             
Sbjct: 243 AQCQAIMEEFTSLYARTDETHDEALFQQVPEERRRSARGIEVGQIFYFGTKYSEPMGATV 302

Query: 514 HSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGNLPLWL---SPIQAIVTTI---TSSAV 565
                  V +H    G  + R IG +IE +      +W    +P    +  +      A 
Sbjct: 303 QGPDGKQVPVHMGSHGIGVSRLIGAIIEASHDDKGIIWPEGVTPFHCGIVNLKQGDDEAD 362

Query: 566 EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
               +I   L +  L    D RNE    K     +  +P  I  G +      + +    
Sbjct: 363 AACDKIYKALTALGLEPLYDDRNERAGGKFATMDLIGLPWRITVGPRGLKNGVVELTSRR 422

Query: 626 STTTQKVSLLDAIPILTK 643
           +  ++++S   A+  + +
Sbjct: 423 TGESEELSPEAAVTRIAE 440


>gi|126739185|ref|ZP_01754879.1| prolyl-tRNA synthetase [Roseobacter sp. SK209-2-6]
 gi|126719802|gb|EBA16510.1| prolyl-tRNA synthetase [Roseobacter sp. SK209-2-6]
          Length = 451

 Score =  189 bits (480), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 76/446 (17%), Positives = 154/446 (34%), Gaps = 37/446 (8%)

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLF--HIAEDGSGVIFWHRKGWKIFQTLISYMR-R 285
             L++Y   + +    + + ++    L    I +  +G+  W   G+K+ + + + +   
Sbjct: 1   MRLSRYFLPVLKETPSEAQIVSHRYMLRAGMIKQSSAGIYSWLPLGFKVLKKIETIVHDE 60

Query: 286 KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +++  +  +  P +    LW++SG +D Y   M  +       +  R     P N     
Sbjct: 61  QMRAGHIPMLMPTLQSADLWKESGRYDDYGEEMLRIND-----RHGRDMLYGPTNEELIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNEC 404
            +F   + SY++LP+ L      +R+E      G+MR R F   D + F  TKE   +  
Sbjct: 116 DIFRGHVSSYKDLPLTLYHIQWKFRDEIRPRF-GVMRGREFYMKDGYNFDLTKEDALHAY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNS----SQ 460
            +     +  Y+  G + I ++    P     +      AE     V      +      
Sbjct: 175 NRHLVTYLRSYERMGLQAIPMRADGGPIGGDYTHEFLVLAETGESEVFYDSAVTDLTFGD 234

Query: 461 DRINT-------GVLLGEGAFYGPKFEYILKDAIG-----RDWQCGTI---QVDFNLPSR 505
             I+        GVL    + Y    E   +         R      I   Q+ +     
Sbjct: 235 REIDYDSVEQCQGVLEEFTSKYARTDETHDEALFKEIPEERRRVARGIEVGQIFYFGTKY 294

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGNLPLWL---SPIQAIVTTI 560
             A      +     V +H    G  + R +G +IE +      +W    +P    +  +
Sbjct: 295 SEALGATVQTADGGSVPVHMGSHGIGVSRLLGAIIEASHDDKGIIWPEGVTPFHCGIVNL 354

Query: 561 ---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASER 617
                 A    ++I   L +  L    D R E    K     +  +P  I  G +     
Sbjct: 355 KQGDDEADAACEKIYAALSAVGLEPLYDDRKERAGGKFATMDLIGLPWRITVGPRGLKNG 414

Query: 618 SIGIRRFGSTTTQKVSLLDAIPILTK 643
            + +    +  ++++S  +A+  + +
Sbjct: 415 VVELTSRRTGESEEMSPEEAVKKVAE 440


>gi|126725673|ref|ZP_01741515.1| prolyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150]
 gi|126704877|gb|EBA03968.1| prolyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150]
          Length = 470

 Score =  189 bits (480), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 78/438 (17%), Positives = 149/438 (34%), Gaps = 40/438 (9%)

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEI 294
               +++   HR + R      I +  +G+  W   G K+ + +   +  +  K  +  +
Sbjct: 38  ENPADAQIVSHRLMLRAGM---IKQASAGIYSWLPLGLKVLRNIERIVHEEQAKAGHIPV 94

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
             P V    LW++SG +D Y   M  +     + +        P N      +F   + S
Sbjct: 95  LMPTVQSADLWRESGRYDDYGEEMLRI-----SDRHGHDMLYGPTNEEQITDIFRAHVHS 149

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIIS 413
           Y++LP+ L +    +R+E      G+MR R F   D + F    +   +   +     + 
Sbjct: 150 YKDLPLTLYQIQWKFRDERRPRF-GVMRGREFLMKDGYNFDIDYDSAMHAYNRHMVAYLR 208

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL---DTIKNSSQDRIN------ 464
            Y+  G + I ++  + P     +      A+     V    D +  +  DR+       
Sbjct: 209 TYERMGLKAIPMRADSGPIGGEDTHEFLVLADTGESEVFYDSDILDLNFGDRVVDFDDVS 268

Query: 465 --TGVLLGEGAFYGPKFEYILKDAIG----------RDWQCGTIQVDFNLPSRFNAFYVN 512
               V+      Y    E   +              R  + G I       S      V 
Sbjct: 269 ACAEVVTEWTTPYARTDETHDEALYNDIPEARRKSSRGIEVGQIFYFGTKYSDSMGASVV 328

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNLPLWL---SPIQAIVTTI--TSSAVE 566
              +   PV +     G   R +G +IE +   N  +W    +P    +  +     A +
Sbjct: 329 DGEQNKVPVHMGSHGIGVS-RLLGAIIEASHDDNGIIWPEGVTPFHCGIVNLRQGDEATD 387

Query: 567 YAQ-EIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
            A   +   L +  L    D RNE    K     +  +P  I  G +      + +    
Sbjct: 388 GACGALYEALTAAGLEPLYDDRNERAGAKFATMDLIGLPWRITVGPRGLKNGVVELTSRR 447

Query: 626 STTTQKVSLLDAIPILTK 643
           +  +Q++S+  A+  + K
Sbjct: 448 TGESQELSIEAAVEAVVK 465


>gi|254453587|ref|ZP_05067024.1| prolyl-tRNA synthetase [Octadecabacter antarcticus 238]
 gi|198267993|gb|EDY92263.1| prolyl-tRNA synthetase [Octadecabacter antarcticus 238]
          Length = 428

 Score =  189 bits (479), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 71/416 (17%), Positives = 146/416 (35%), Gaps = 35/416 (8%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
            I +  +G+  W   G+K+ + +   +  + +   +  I  P +    LW++SG +++Y 
Sbjct: 6   MIKQSSAGIYSWLPLGFKVLKRIEQIVHEEQERAGHIAIQMPTIQSADLWRESGRYEAYG 65

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
             M  +K      ++       P        +F   + SY+ LP+ L +    +R+E   
Sbjct: 66  DEMLRIKD-----RNGNDLLFTPTAEELVTDIFRSHVASYKSLPMTLYQIQWKFRDERRP 120

Query: 376 SLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              G+MR R F   D + F  TKE   +   +     +  Y+  G + I ++ ++ P   
Sbjct: 121 RF-GVMRGREFYMKDGYTFDLTKEDAMHAYNRHLVSYLRTYERMGLQAIPMRAASGPIGG 179

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA-------FYGPKF-------E 480
             +      A+     V      +     N  +   + A        +  K+       +
Sbjct: 180 DDTHEFLVLADTGESEVFYDAAVTELSFGNREIDYDDVAQCADVMEEFTTKYARTDETHD 239

Query: 481 YILKDAI--GRDWQCGTI---QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
             L DAI   R      I   Q+ +      +A           P  +H    G  + R 
Sbjct: 240 PALFDAIPADRQRTARGIEVGQIFYFGTKYSDAMGATVQGPDGKPTAVHMGSHGIGVSRL 299

Query: 535 IGIMIE-NFKGNLPLWL---SPIQAIVTTITS---SAVEYAQEIANLLKSHHLSIETDFR 587
           +G +IE +      +W    +P    +  +      A    Q + + + +  L    D R
Sbjct: 300 LGAIIEASHDDKGIIWPEGVTPFHVGIVNLKQGDADADAACQSLYDAVAALGLEALYDDR 359

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +E    K     +  +P  I  G +      + +    +  ++++    AI  + +
Sbjct: 360 DERAGSKFGTMDMIGLPWRITVGPRGLKNGVVELTSRKTGESEEMPPEQAIAKIGE 415


>gi|71394075|gb|AAZ32114.1| prolyl-tRNA synthetase [uncultured euryarchaeote Alv-FOS5]
          Length = 472

 Score =  189 bits (479), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 78/427 (18%), Positives = 169/427 (39%), Gaps = 62/427 (14%)

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEE 293
           + F +E+    ++++    +L        G++ W   G+KI + +   +R  +++  ++E
Sbjct: 1   MEFPKENFSEWYQEVLESAELVDNRYPVKGMLVWRPNGFKIRKYVTDLLRELLEETGHQE 60

Query: 294 INTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           +  P ++ +    ++  H   + + ++ +    +T  D++  AL+P +      +F   +
Sbjct: 61  VLFPTLIPETALNKEGEHIRGFGSEVYWITHGGETPLDVK-LALRPTSETAMYPMFALWI 119

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF-TQDDAHVFCTKEQMFNECLKIHN-L 410
           +S+ +LP+R+ +  SV+R E       L+RVR   T  +AH     E+   + ++I + +
Sbjct: 120 RSHADLPLRVFQIVSVFRYETK-HTRPLIRVREVSTFKEAHCALKTEEEAEKEMRIIDGV 178

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
             + + + G   + V+  +           WD                            
Sbjct: 179 YKAFWDELGIPFVRVQRPS-----------WDKF-------------------------- 201

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG 529
            GA     ++ I+    GR  Q  T   +       F+  Y + + E+    +      G
Sbjct: 202 AGADKTIAYDTIMPT--GRTLQIATSHRLSQKFSEVFDVKYEDENGEQKLAYLTSH---G 256

Query: 530 SIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI-----TSSAVEYAQEIANLLKSHHL 580
             ER I  ++    +N    LP   +P+Q ++  I      +  +E A E+   LK ++ 
Sbjct: 257 ISERAIAALVGIHGDNRGLVLPPRFAPVQVVIVPILYKGKENQVMEKAMEVYEKLK-YNW 315

Query: 581 SIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV---SLLDA 637
            +E D  +     K     ++ +PI I  G ++     + + R  +    +V    L D 
Sbjct: 316 RVELDDSDSNPGDKFYYWELRGVPIRIEIGPRDVENGVVTLARRDTKEKTQVKMEELEDK 375

Query: 638 IPILTKE 644
           I  L +E
Sbjct: 376 INRLAEE 382


>gi|254511426|ref|ZP_05123493.1| prolyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11]
 gi|221535137|gb|EEE38125.1| prolyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11]
          Length = 456

 Score =  189 bits (479), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 79/456 (17%), Positives = 152/456 (33%), Gaps = 45/456 (9%)

Query: 224 AWNTQQELTQYLYFLEESEKRD--HRKLAREMDLF--HIAEDGSGVIFWHRKGWKIFQTL 279
                 E+    YFL   ++     + ++  + L    I +  +G+  W   G+K+ + L
Sbjct: 4   FHPKGYEMRLSRYFLPVLKENPSEAQIVSHRLMLRAGMIKQAAAGIYSWLPLGFKVLRKL 63

Query: 280 ISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKP 338
            + +  +  +  +  I  P +    LW++SG +D Y   M  +K   D     R     P
Sbjct: 64  ENIVHEEQARAGHIAIQMPILQSADLWRESGRYDGYGQEMLRMKDRHD-----RDMLFTP 118

Query: 339 MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TK 397
                   +F   + SY++LP+ L +    +R+E      G+MR R F   D + F  T 
Sbjct: 119 TAEELVTDIFRGHVSSYKDLPLTLYQIQWKFRDEIRPRF-GVMRGREFYMKDGYNFDLTM 177

Query: 398 EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKN 457
           E   +   +     +  Y+  G + I ++  + P     +      AE     V      
Sbjct: 178 EDALHAYNRHLVSYLRTYERMGLQAIPMRADSGPIGGDYTHEFLVLAETGESEVFYDSAV 237

Query: 458 S----SQDRINT-------GVLLGEGAFYGPKFEYILKDAIG----------RDWQCGTI 496
           +        I+         ++    + Y    E   +              R  + G I
Sbjct: 238 TDLTFGDRDIDYDNRDQCQAIMDEFTSKYARTDETHDEALFDQVPEDRRRVARGIEVGQI 297

Query: 497 QV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGNLPLWL--- 550
                N      A       +   PV +H    G  + R IG +IE +      +W    
Sbjct: 298 FYFGTNYSEAMGATVQGPDGK---PVPVHMGSHGIGVSRLIGAIIEASHDDKGIIWPEGV 354

Query: 551 SPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIII 607
           +P    +  +      A      +   L +  L    D R E    K     +  +P  I
Sbjct: 355 TPFHCGIVNLKQGDDEADAACDTLYAALTALGLEPLYDDRKERAGGKFATMDLIGLPWRI 414

Query: 608 ICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             G +      + +    +  ++++S   A+  + +
Sbjct: 415 TVGPRGLKNGVVELTSRRTGESEELSPEAAVAKIAE 450


>gi|28948883|pdb|1NJ1|A Chain A, Crystal Structure Of Prolyl-Trna Synthetase From
           Methanothermobacter Thermautotrophicus Bound To Cysteine
           Sulfamoyl Adenylate
 gi|28948884|pdb|1NJ2|A Chain A, Crystal Structure Of Prolyl-Trna Synthetase From
           Methanothermobacter Thermautotrophicus
 gi|28948885|pdb|1NJ5|A Chain A, Crystal Structure Of Prolyl-Trna Synthetase From
           Methanothermobacter Thermautotrophicus Bound To Proline
           Sulfamoyl Adenylate
 gi|28948886|pdb|1NJ6|A Chain A, Crystal Structure Of Prolyl-Trna Synthetase From
           Methanothermobacter Thermautotrophicus Bound To Alanine
           Sulfamoyl Adenylate
          Length = 501

 Score =  189 bits (479), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 70/430 (16%), Positives = 152/430 (35%), Gaps = 55/430 (12%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
             +++  +Y              +  E ++        G+  W   G+ I +  +  +RR
Sbjct: 24  PIKKDPNRYHGEKMTEFSEWFHNILEEAEIIDQRYPVKGMHVWMPHGFMIRKNTLKILRR 83

Query: 286 KIKDDYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
            +  D+EE+  P ++ +    +++ H   +   ++ V     + K  R  AL+P +    
Sbjct: 84  ILDRDHEEVLFPLLVPEDELAKEAIHVKGFEDEVYWVTHGGLS-KLQRKLALRPTSETVM 142

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD-DAHVFC-TKEQMFN 402
             +F   ++S+ +LP+R  +  + +R E       L+RVR  T   +AH    T  +   
Sbjct: 143 YPMFALWVRSHTDLPMRFYQVVNTFRYETK-HTRPLIRVREITTFKEAHTIHATASEAEE 201

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
           +  +   +    +   G   ++ +              WD                    
Sbjct: 202 QVERAVEIYKEFFNSLGIPYLITRRPP-----------WDKF------------------ 232

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
                    G+ Y   F+ ++ D  G+  Q GT+       +R   F +   + +     
Sbjct: 233 --------PGSEYTVAFDTLMPD--GKTLQIGTVHNLGQTFAR--TFEIKFETPEGDHEY 280

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPI----QAIVTTIT-----SSAVEYAQEIAN 573
           +H+  +G  +R I  +I        L L P     Q ++  I         +E  +E+ +
Sbjct: 281 VHQTCYGLSDRVIASVIAIHGDESGLCLPPDVAAHQVVIVPIIFKKAAEEVMEACRELRS 340

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            L++    +  D R+     K  E  ++ +P+ +  G ++  + +  I R  +       
Sbjct: 341 RLEAAGFRVHLDDRDIRAGRKYYEWEMRGVPLRVEIGPRDLEKGAAVISRRDTGEKVTAD 400

Query: 634 LLDAIPILTK 643
           L      L +
Sbjct: 401 LQGIEETLRE 410


>gi|121730168|ref|ZP_01682562.1| threonyl-tRNA synthetase [Vibrio cholerae V52]
 gi|121628087|gb|EAX60627.1| threonyl-tRNA synthetase [Vibrio cholerae V52]
          Length = 153

 Score =  189 bits (479), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 62/143 (43%), Positives = 87/143 (60%)

Query: 502 LPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT 561
           LP+R  A YV   +E+  PVMIHRA+ GS+ERFIGI+IE + G  P WL+P QA+V  IT
Sbjct: 1   LPTRLGATYVGESNERLIPVMIHRAILGSLERFIGILIEEYAGFFPTWLAPEQAVVVNIT 60

Query: 562 SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
               +YA E+A  L+   +  + D RNE I +KIREH++K++P +++CGD+E     I +
Sbjct: 61  DKQADYAHEVAQKLQKCGIRAKADLRNEKIGFKIREHTLKRVPYMLVCGDQEMEAGEIAV 120

Query: 622 RRFGSTTTQKVSLLDAIPILTKE 644
           R        K  L D I  +  E
Sbjct: 121 RTRKGKDLGKFKLDDFIAHIQAE 143


>gi|15678639|ref|NP_275754.1| prolyl-tRNA synthetase [Methanothermobacter thermautotrophicus str.
           Delta H]
 gi|3334356|sp|O26708|SYP_METTH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|2621691|gb|AAB85117.1| prolyl-tRNA synthetase [Methanothermobacter thermautotrophicus str.
           Delta H]
          Length = 482

 Score =  189 bits (479), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 70/430 (16%), Positives = 152/430 (35%), Gaps = 55/430 (12%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
             +++  +Y              +  E ++        G+  W   G+ I +  +  +RR
Sbjct: 4   PIKKDPNRYHGEKMTEFSEWFHNILEEAEIIDQRYPVKGMHVWMPHGFMIRKNTLKILRR 63

Query: 286 KIKDDYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
            +  D+EE+  P ++ +    +++ H   +   ++ V     + K  R  AL+P +    
Sbjct: 64  ILDRDHEEVLFPLLVPEDELAKEAIHVKGFEDEVYWVTHGGLS-KLQRKLALRPTSETVM 122

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD-DAHVFC-TKEQMFN 402
             +F   ++S+ +LP+R  +  + +R E       L+RVR  T   +AH    T  +   
Sbjct: 123 YPMFALWVRSHTDLPMRFYQVVNTFRYETK-HTRPLIRVREITTFKEAHTIHATASEAEE 181

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
           +  +   +    +   G   ++ +              WD                    
Sbjct: 182 QVERAVEIYKEFFNSLGIPYLITRRPP-----------WDKF------------------ 212

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
                    G+ Y   F+ ++ D  G+  Q GT+       +R   F +   + +     
Sbjct: 213 --------PGSEYTVAFDTLMPD--GKTLQIGTVHNLGQTFAR--TFEIKFETPEGDHEY 260

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPI----QAIVTTIT-----SSAVEYAQEIAN 573
           +H+  +G  +R I  +I        L L P     Q ++  I         +E  +E+ +
Sbjct: 261 VHQTCYGLSDRVIASVIAIHGDESGLCLPPDVAAHQVVIVPIIFKKAAEEVMEACRELRS 320

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            L++    +  D R+     K  E  ++ +P+ +  G ++  + +  I R  +       
Sbjct: 321 RLEAAGFRVHLDDRDIRAGRKYYEWEMRGVPLRVEIGPRDLEKGAAVISRRDTGEKVTAD 380

Query: 634 LLDAIPILTK 643
           L      L +
Sbjct: 381 LQGIEETLRE 390


>gi|213580235|ref|ZP_03362061.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
          Length = 168

 Score =  188 bits (478), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 62/171 (36%), Positives = 108/171 (63%), Gaps = 4/171 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D SD +  + ++
Sbjct: 1   MPV---ITLPDGSQRHYDHPVSPMDVALDIGPGLAKATIAGRVNGELVDASDLIENDATL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L +IRHSCAH++  A++ +WP  ++AIGP++++GFYYD D ++  + +++
Sbjct: 58  SIITAKDEEGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVVDNGFYYDVDLDRTLTQEDV 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN 170
             +EK+M E+  ++   +K+ +S  +ARE F  + E+YKV IL+   A ++
Sbjct: 118 EALEKRMHELAEKNYDVIKKKVSWHEARETFVKRGESYKVSILDENIAHDD 168


>gi|149201764|ref|ZP_01878738.1| prolyl-tRNA synthetase [Roseovarius sp. TM1035]
 gi|149144812|gb|EDM32841.1| prolyl-tRNA synthetase [Roseovarius sp. TM1035]
          Length = 451

 Score =  188 bits (478), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 81/433 (18%), Positives = 155/433 (35%), Gaps = 48/433 (11%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQH 303
            HR + R      I +  +G+  W   G+KI + L + +  + ++  +  +  P +    
Sbjct: 22  SHRLMLRAGM---IKQASAGIYSWLPLGFKILRKLENIVHEEQVRAGHIPVLMPTLQSAD 78

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SG +D Y A M  +K   D     R     P N      +F   + SY++LP+ L 
Sbjct: 79  LWRESGRYDDYGAEMLRIKDRHD-----RDMLYGPTNEELITDIFRAHVGSYKDLPLTLY 133

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKDFGFEK 422
                +R+E      G+MR R F   D + F  TKE   +   +     +  Y+  G + 
Sbjct: 134 HIQWKFRDEVRPRF-GVMRGREFLMKDGYNFDLTKEDALHAYNRHMVSYLRTYERMGLQA 192

Query: 423 IMVKLSTRPEKRVGSDAL------------WDDAENIMK---GVLDTIKNSSQDRINTGV 467
           I ++  + P     +               +D A   ++    V+D    +  + I T  
Sbjct: 193 IPMRADSGPIGGDDTHEFLVLADTGESEVFYDSAITDLRLGGRVVDYASRAECEAIVTEW 252

Query: 468 --------LLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA-FYVNSHSEKC 518
                      + A Y       + +A  R  +   +   F   ++++     N      
Sbjct: 253 TTPYARTDETHDAALY-----EAIPEARRRASRGIEVGQIFYFGTKYSEPMGANVQGPDG 307

Query: 519 HPVMIHRAVFGS-IERFIGIMIE-NFKGNLPLWL---SPIQAIVTTITSSAVEYAQE--- 570
             V +H    G  + R IG +IE N      +W    +P  A +  +     E       
Sbjct: 308 KSVPVHMGSHGIGVSRLIGAIIEANHDDKGIIWPEGVTPFHAGIVNLKQGDAEADAACEA 367

Query: 571 IANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
           +   L +  +    D R+E    K     +  +P  I  G +      + +    +  ++
Sbjct: 368 LYASLVALGMEPLYDDRDERAGGKFATMDLIGLPWRITVGPRGLKNGVVELTSRRTGISE 427

Query: 631 KVSLLDAIPILTK 643
           ++    A+  L +
Sbjct: 428 ELPPEQAVEKLAQ 440


>gi|84683507|ref|ZP_01011410.1| prolyl-tRNA synthetase [Maritimibacter alkaliphilus HTCC2654]
 gi|84668250|gb|EAQ14717.1| prolyl-tRNA synthetase [Rhodobacterales bacterium HTCC2654]
          Length = 444

 Score =  188 bits (478), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 79/436 (18%), Positives = 147/436 (33%), Gaps = 42/436 (9%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
            E++   HR + R      I +  +G+  W   G+K+ + +   +  + +   +  I  P
Sbjct: 16  SEAQIASHRLMLRAGM---IKQQAAGIYSWLPLGYKVLKNIERIVHEEQQRAGHIPILMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW++SG +D Y   M  +     T +  R     P N      +F   + SY++
Sbjct: 73  TLQSADLWRESGRYDDYGQEMLRI-----TDRHGRDMLYGPTNEEMVTDIFRAHVGSYKD 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYK 416
           LP+ L      +R+E      G+MR R F   D + F  T+E   +   +     +  Y+
Sbjct: 128 LPLTLYHIQWKFRDEIRPRF-GVMRGREFFMKDGYNFDLTREDALHAYNRHLVSYLRTYE 186

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIK----NSSQDRINT------- 465
             G + I ++    P     +      AE     V    +          I+        
Sbjct: 187 RMGLQAIPMRADGGPIGGDYTHEFLVLAETGESEVFYDSEITDLKFGDREIDYDSVEACQ 246

Query: 466 GVLLGEGAFYGPKFEYILKDAIG----------RDWQCGTIQV-DFNLPSRFNAFYVNSH 514
            VL    + Y    E   +              R  + G I            A   +S 
Sbjct: 247 AVLEEFTSRYARTDETHDEALFNEIPEERRRVARGIEVGQIFYFGTKYSEAMGATVQDSD 306

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNLPLWL---SPIQAIVTTI---TSSAVEY 567
             K  PV +     G   R +G +IE N      +W    +P    +  +      A   
Sbjct: 307 GNKV-PVEMGSHGIGVS-RLVGALIEANHDDKGIIWPEGVTPFHCGIVNLKQGDDEADAA 364

Query: 568 AQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGST 627
            + +   L +  L    D RNE    K     +  +P  I  G +      + +    + 
Sbjct: 365 CETLYKALTAAGLEPLYDDRNERAGGKFATMDLIGLPWRITVGPRGLKNGVVELTSRRTG 424

Query: 628 TTQKVSLLDAIPILTK 643
            +++++   A+  + +
Sbjct: 425 ESEELAPEAAVAKVRE 440


>gi|224541864|ref|ZP_03682403.1| hypothetical protein CATMIT_01036 [Catenibacterium mitsuokai DSM
           15897]
 gi|224525214|gb|EEF94319.1| hypothetical protein CATMIT_01036 [Catenibacterium mitsuokai DSM
           15897]
          Length = 479

 Score =  188 bits (478), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 71/433 (16%), Positives = 163/433 (37%), Gaps = 56/433 (12%)

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR 284
                     +   +    + +  + R+ +L   +    G I +   G+ +++ + SY+ 
Sbjct: 1   MAKNNIKNDAITPRDVDFAQWYTDVCRKAELMDYSSVK-GFIIYRPYGYALWEQIQSYLD 59

Query: 285 RKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
           ++ K+  ++ +  P ++ + L  ++  H + +     AV              ++P +  
Sbjct: 60  KRFKETGHQNVYMPMLIPESLLNKEKDHVEGFAPE-CAVVTKGGLDDLEEHLIVRPTSET 118

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMF 401
                +   + SYR+LP +  ++ SV R E   +    +R   F   + H    T+E+  
Sbjct: 119 LFCEHYAKIVNSYRDLPKKYNQWCSVVRWEK--TTRPFLRGSEFLWQEGHTIHATEEEAR 176

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
           +E L + ++     K+     ++    T  EK  G++  +                    
Sbjct: 177 SETLMMRDIYEETAKELLAIPMLTGRKTEREKFAGAEETY-------------------- 216

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFN-LPSRFNAFYVNSHSEKCHP 520
                             E ++ D  G+  Q GT           FN  +++  ++  H 
Sbjct: 217 ----------------TIEALMHD--GKALQSGTSHYFGQGFAKAFNMTFLDKDNKLKH- 257

Query: 521 VMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSS---AVEYAQEIAN 573
             +++  +G   R +G +I    ++    LP  L+P Q ++  I       +E A EIA 
Sbjct: 258 --VYQTSWGVSTRLLGAIIMVHGDDNGLVLPPRLAPTQVVIIPIQQKKAGVLEKADEIAA 315

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            LK+  + +  D  +++  +K  E  ++ IP+ I  G ++       + +       ++ 
Sbjct: 316 QLKAAGMRVSVDASDKSPGWKFSEAEMRGIPVRIEVGPRDIENGHCVVVKRNDGVKTQMD 375

Query: 634 LLDAIPILTKESL 646
           L + +P    ++L
Sbjct: 376 LDENLPQAIHDTL 388


>gi|156937156|ref|YP_001434952.1| prolyl-tRNA synthetase [Ignicoccus hospitalis KIN4/I]
 gi|172044461|sp|A8A9E3|SYP_IGNH4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|156566140|gb|ABU81545.1| prolyl-tRNA synthetase [Ignicoccus hospitalis KIN4/I]
          Length = 478

 Score =  188 bits (478), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 83/428 (19%), Positives = 159/428 (37%), Gaps = 62/428 (14%)

Query: 234 YLYFLEESEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DY 291
                EE+       + RE  L+        G+  W   G+K+ + +++ +R  +    +
Sbjct: 1   MKLNKEENFSEWFDTVLRESGLYDYGRYPVKGMGVWPPFGFKLRKLVLNIIRDLLDSTGH 60

Query: 292 EEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH 350
           EE+  P ++ + L + +S H   +   +F V        D+   AL+P +      + + 
Sbjct: 61  EEVLFPVLIPKTLLEKESEHIRGFEGEVFWVTKGGHEDLDV-PLALRPTSETAISYMESF 119

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF-TQDDAHVFCTK-EQMFNECLKIH 408
            + SY++LP++L +   VYR E   +   L+R+R   T  +AH      E   ++C +  
Sbjct: 120 WISSYKQLPMKLYQIVPVYRYETK-ATRPLIRLREVSTFKEAHTAHESFEGADSQCAEAI 178

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
            +   ++   G   ++ +              WD                          
Sbjct: 179 EIYKKVFDRLGIPYMISQRPP-----------WDKF------------------------ 203

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAV 527
              GA Y   F+ ++ D  GR  Q GT+  +  N    F   +     +K +   + +  
Sbjct: 204 --AGALYTVAFDTVMPD--GRVLQIGTVHHLGQNFSVPFEVRFHTEDGDKDY---VWQTS 256

Query: 528 FGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITS-------SAVEYAQEIANLLK 576
           +G  +R I  ++    +     LP  ++P+Q ++  I           +E A+ +   LK
Sbjct: 257 YGLSDRVIASLVAVHGDERGLVLPPEVAPVQVVIVPIPQKEEEQQRKVLEEAKRVEEELK 316

Query: 577 SHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
           +       D R+E T   K  E  +K +P  I  G KE     + + R       KV   
Sbjct: 317 ARGWRTVLDDRDELTPGAKYYEWELKGVPFRIEIGKKEVEGDELTVARRDLKKRVKVKKG 376

Query: 636 DAIPILTK 643
           +    L +
Sbjct: 377 EIHQRLKE 384


>gi|85704335|ref|ZP_01035438.1| prolyl-tRNA synthetase [Roseovarius sp. 217]
 gi|85671655|gb|EAQ26513.1| prolyl-tRNA synthetase [Roseovarius sp. 217]
          Length = 451

 Score =  188 bits (477), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 78/439 (17%), Positives = 152/439 (34%), Gaps = 48/439 (10%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTP 297
            E++   HR + R      I +  +G+  W   G+KI + L + +  + ++  +  +  P
Sbjct: 16  SEAQIASHRLMLRAGM---IKQASAGIYSWLPLGFKILRKLENIVHEEQVRAGHIPVLMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW++SG +D Y A M  +K   D     R     P N      +F   + SY++
Sbjct: 73  TLQSADLWRESGRYDDYGAEMLRIKDRHD-----RDMLYGPTNEELITDIFRAHVGSYKD 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYK 416
           LP+ L      +R+E      G+MR R F   D + F  TK+   +   +     +  Y+
Sbjct: 128 LPLTLYHIQWKFRDEVRPRF-GVMRGREFLMKDGYNFDLTKDDALHAYNRHMVSYLRTYE 186

Query: 417 DFGFEKIMVKLSTRPEKRVGSDAL------------WDDAENIM-----------KGVLD 453
             G + I ++  + P     +               +D A   +           +    
Sbjct: 187 RMGLQAIPMRADSGPIGGDDTHEFLVLADTGESEVFYDSAITDLSLGDRVVDYASRAECA 246

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA-FYVN 512
            I               + A Y       + +A  R  +   +   F   ++++     N
Sbjct: 247 AIVTEWTTPYARTDETHDAALYDA-----IPEARRRASRGIEVGQIFYFGTKYSEPMGAN 301

Query: 513 SHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGNLPLWL---SPIQAIVTTITSSAVEY 567
                   V +H    G  + R +G +IE N      +W    +P  A +  +     E 
Sbjct: 302 VQGPDGKSVPVHMGSHGIGVSRLVGAIIEANHDDKGIIWPEGVTPFHAGIVNLKQGDAEA 361

Query: 568 AQE---IANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRF 624
                 I   L +  +    D R+E    K     +  +P  I  G +      +     
Sbjct: 362 DAACEAIYASLTALGMEPLYDDRDERAGGKFATMDLIGLPWRITVGPRGLKNGVVEFTSR 421

Query: 625 GSTTTQKVSLLDAIPILTK 643
            +  ++++   +A+  L +
Sbjct: 422 RTGISEELPPEEAVAKLVQ 440


>gi|163737417|ref|ZP_02144834.1| prolyl-tRNA synthetase [Phaeobacter gallaeciensis BS107]
 gi|161388943|gb|EDQ13295.1| prolyl-tRNA synthetase [Phaeobacter gallaeciensis BS107]
          Length = 451

 Score =  188 bits (477), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 75/449 (16%), Positives = 152/449 (33%), Gaps = 43/449 (9%)

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLF--HIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
             L++Y   + +    + + ++    L    I +  +G+  W   G+K+ + + + +  +
Sbjct: 1   MRLSRYFLPVLKENPSEAQIVSHRYMLRAGMIKQSAAGIYSWLPLGFKVLKKIETIVHEE 60

Query: 287 -IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            ++  +  +  P +    LW++SG +D Y   M  +     + +  R     P N     
Sbjct: 61  QMRAGHIPMLMPTLQSADLWKESGRYDDYGQEMLRI-----SDRHGRDMLYGPTNEELIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNEC 404
            +F   + SY++LP+ L      +R+E      G+MR R F   D + F  TKE   +  
Sbjct: 116 DIFRSHVGSYKDLPLTLYHIQWKFRDEIRPRF-GVMRGREFYMKDGYNFDLTKEDALHAY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL-----WDDAENIMKGVLDTIKNSS 459
            +     +  Y+  G + I ++    P     +          ++E      +  +    
Sbjct: 175 NRHLVSYLRSYERMGLQAIPMRADGGPIGGDYTHEFLVLADTGESEVFYDSAVTDL-TFG 233

Query: 460 QDRINT-------GVLLGEGAFYGPKFEYILKDAIG----------RDWQCGTIQV-DFN 501
              I+        GVL    + Y    E   +              R  + G I      
Sbjct: 234 DRAIDYDSVEQCQGVLEEFTSKYARTDETHDEALFNEVPEERRRVARGIEVGQIFYFGTK 293

Query: 502 LPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNLPLWL---SPIQAIV 557
                 A        K  PV +     G   R +G +IE +      +W    +P    +
Sbjct: 294 YSEALGANVQGPDG-KQSPVHMGSHGIGVS-RLLGAIIEASHDDKGIIWPEGVTPFHCGI 351

Query: 558 TTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
             +      A    + +   L +  L    D R E    K     +  +P  I  G +  
Sbjct: 352 VNLKQGDDEADAACESLYEALTAAGLEPLYDDRKERAGGKFATMDLIGLPWRITVGPRGL 411

Query: 615 SERSIGIRRFGSTTTQKVSLLDAIPILTK 643
               + +    S  ++++S   A+  + +
Sbjct: 412 KNGVVELTSRRSGESEELSPEAAVQKIVE 440


>gi|260428562|ref|ZP_05782541.1| prolyl-tRNA synthetase [Citreicella sp. SE45]
 gi|260423054|gb|EEX16305.1| prolyl-tRNA synthetase [Citreicella sp. SE45]
          Length = 447

 Score =  188 bits (477), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 74/449 (16%), Positives = 154/449 (34%), Gaps = 43/449 (9%)

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLF--HIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
             L++Y   + +    + + ++    L    I +  +G+  W   G+K+ + + + +  +
Sbjct: 1   MRLSRYFLPVLKETPAEAQIVSHRYMLRAGMIKQASAGIYSWLPMGFKVLRKIENIIHEE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +   +  +  P +    LW++SG +D+Y A M  +    D     R     P       
Sbjct: 61  QQRAGHIPMLMPTIQSAELWRESGRYDAYGAEMLRITDRHD-----REMLFTPTAEELIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNEC 404
            +F   + SYR+LP+ + +    +R+E      G+MR R F   D + F  TKE   +  
Sbjct: 116 DIFRANVSSYRDLPLTMYQIQWKFRDEIRPRF-GVMRGREFLMKDGYNFDLTKEDALHAY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIK----NSSQ 460
            +     +  Y+  G + I ++  + P     +      AE     V    +        
Sbjct: 175 NRHLVSYLRTYERMGLQAIPMRADSGPIGGDDTHEFLVLAETGESEVFYDSQITDLKFGD 234

Query: 461 DRINT-------GVLLGEGAFYGPKFEYILKDAIG----------RDWQCGTIQV-DFNL 502
             I+         VL    + Y    E   +              R  + G I       
Sbjct: 235 REIDYDSREQCQAVLEEFTSRYARTDETHDEAVFNQVPEERRRVARGIEVGQIFYFGTKY 294

Query: 503 PSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGNLPLWL---SPIQAIV 557
                A   ++   +   V +H    G  + R +G +IE +      +W    +P    +
Sbjct: 295 SEPLGATVADADGNQ---VPVHMGSHGIGVSRLLGAIIEASHDDKGIIWPEGVTPFHCGI 351

Query: 558 TTITSSAVE---YAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
             + +   E     ++I   L +  L    D   E    K     +  +P  I  G +  
Sbjct: 352 VNLKTGDAEADAACEKIHAALIALGLDPLYDDTTERAGAKFATMDLIGLPWRITVGPRGL 411

Query: 615 SERSIGIRRFGSTTTQKVSLLDAIPILTK 643
               + +    +  ++++    A+  + +
Sbjct: 412 KNGVVELTSRRTGESEEMPPEAAVAKIAE 440


>gi|319936200|ref|ZP_08010620.1| prolyl-tRNA synthetase [Coprobacillus sp. 29_1]
 gi|319808774|gb|EFW05307.1| prolyl-tRNA synthetase [Coprobacillus sp. 29_1]
          Length = 479

 Score =  188 bits (476), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 65/423 (15%), Positives = 161/423 (38%), Gaps = 56/423 (13%)

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR 284
               +     +   +    + +  + R+ +L   +    G I +   G+ +++ + +YM 
Sbjct: 1   MANNKVKNDAITSRDVDFAKWYTDVCRKAELMDYSSVK-GFIIYRPYGYALWEMIQAYMD 59

Query: 285 RKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
           +K K+  +E +  P ++ + L  +++ H + +     AV              ++P +  
Sbjct: 60  KKFKETGHENVYMPMLIPESLLQKEADHVEGFAPE-CAVVTRGGLDNLEENLIIRPTSET 118

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMF 401
                +   + SYR+LP    ++ SV R E   +    +R   F   + H    T+E+  
Sbjct: 119 LFCEHYAKIVNSYRDLPKLYNQWCSVVRWEK--TTRPFLRGSEFLWQEGHTIHATEEEAR 176

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E +++ ++     ++     ++    T  EK  G++  +                    
Sbjct: 177 AETMQMLDIYEETSRNLLAIPMVTGKKTEREKFAGAEETY-------------------- 216

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHP 520
                             E ++ D  G+  Q GT           F   +++  +++ + 
Sbjct: 217 ----------------TIEALMHD--GKALQSGTSHYFGDGFAKAFGIQFLDKDNKQKY- 257

Query: 521 VMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIAN 573
             +H+  +G   R +G +I    ++    LP  ++P Q ++  I       ++ A E+  
Sbjct: 258 --VHQTSWGVSTRLLGAIIMVHGDDNGLVLPPRVAPTQVMIIPIQQQKDGVLDKAYELEQ 315

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            LK+H + ++ D  +++  +K  E  ++ IP+ +  G ++       + +  +     +S
Sbjct: 316 QLKAHGIRVKVDATDKSPGWKFSEAEMRGIPLRLEVGPRDLENGQCVVAKRVNGEKITLS 375

Query: 634 LLD 636
           L +
Sbjct: 376 LDE 378


>gi|126735142|ref|ZP_01750888.1| prolyl-tRNA synthetase [Roseobacter sp. CCS2]
 gi|126715697|gb|EBA12562.1| prolyl-tRNA synthetase [Roseobacter sp. CCS2]
          Length = 446

 Score =  187 bits (475), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 74/446 (16%), Positives = 154/446 (34%), Gaps = 37/446 (8%)

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
             L++Y   + +   R+ + ++    L    I +  +G+  W   G+K+ + + + +  +
Sbjct: 1   MRLSRYFLPVLKETPREAQIVSHRYMLQAGMIKQASAGIYSWLPLGFKVLRKIENIVHEE 60

Query: 287 I-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
             +  +  I  P +    LW++SG +D+Y   M  +K         R     P       
Sbjct: 61  QARAGHIAIQMPTIQSADLWRESGRYDAYGEEMLRIKDRG-----GRDMLFTPTAEELVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNEC 404
            +F   + SY++LP+ L +    +R+E      G+MR R F   D + F  TKE   +  
Sbjct: 116 DIFRAHVNSYKDLPLTLYQIQWKFRDEVRPRF-GVMRGREFYMKDGYNFDLTKEDALHAY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            +     +  Y+  G + I ++  + P     +      AE     V    + +     +
Sbjct: 175 NRHLVSYLRTYERMGLQAIPMRADSGPIGGDDTHEFLVLAETGESEVFYDSEITDLKFGD 234

Query: 465 TGVLLGEGAF-----------YGPKFEYILKDAIG-----RDWQCGTI---QVDFNLPSR 505
             +   + A            Y    E   +         R      I   Q+ +     
Sbjct: 235 RQIDYDDKAACQAVLEEFTSRYARTDETHDEALFDAIPEERKRTARGIEVGQIFYFGTKY 294

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGNLPLWL---SPIQAIVTTI 560
             +        +   V +H    G  + R +G +IE +      +W    +P    +  +
Sbjct: 295 SESMGALVDDGQGGKVPVHMGSHGIGVSRLLGAIIEASHDDKGIIWPEGVTPFHCGILNM 354

Query: 561 TSSAVEY---AQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASER 617
            S         + +   L +  L    D R+E    K     +  +P  I  G +     
Sbjct: 355 RSGDAAADAACEALYASLTALGLEPLYDDRDERAGAKFGTMDMIGLPWRITVGPRGLKNG 414

Query: 618 SIGIRRFGSTTTQKVSLLDAIPILTK 643
            + +    +  ++++   DA+  + K
Sbjct: 415 VVEVTCRRTGESEEMPPEDAVAKIAK 440


>gi|319898898|ref|YP_004158991.1| Prolyl-tRNA synthetase [Bartonella clarridgeiae 73]
 gi|319402862|emb|CBI76413.1| Prolyl-tRNA synthetase [Bartonella clarridgeiae 73]
          Length = 442

 Score =  187 bits (475), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 81/448 (18%), Positives = 153/448 (34%), Gaps = 44/448 (9%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  L       +E+E   HR + R   +    +  SG+  W   G K+   +   +R +
Sbjct: 4   SQYFLPILKENPKEAEVVSHRFMLRAGMVR---QQTSGIYSWLPLGKKVLDKICKIIREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +     EI  P +    LW++SG ++ Y   M  +K   D     R     P N     
Sbjct: 61  QERAGAVEILMPTIQSADLWRESGRYNDYGLEMLRIKDRQD-----RDLLYGPTNEEMIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +F   ++SY++LP+ L      +R+E      G+MR R F   DA+ F           
Sbjct: 116 DIFRSYVRSYKDLPLNLYHIQWKFRDEIRPRF-GVMRAREFLMKDAYSFDLDYASAKTSY 174

Query: 406 -KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIM------KGVLDTIKNS 458
            ++    +  +   G + I V+  T P     S      AE         K  L+     
Sbjct: 175 NRMFVAYLRTFSRIGLKAIPVRADTGPIGGELSHEFIILAETGESSIFCDKRFLEFTVPP 234

Query: 459 -----SQDRINTGVLLGEGAFYGPKFEYILKDAIG----------RDWQCGTI-QVDFNL 502
                +   I   ++    + Y    E   ++             R  + G I       
Sbjct: 235 ISIDFTDKDILADIVRQWTSLYAATEEMHNEEEWSKVSTNNKLAARGIEVGHIFHFGTKY 294

Query: 503 PSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGNLPLWLSPIQAI---V 557
            +   A  +    ++    +I    +G    R +  +IE +   +  +W  PI      +
Sbjct: 295 SAPMGAKVMGQDGKEH---LISMGSYGIGPSRLVAAIIESSHDEHGIIWPKPITPFDCGI 351

Query: 558 TTITSSAVEY---AQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
             +     +     + +   L         D  NE    K     +  +PI +I G K A
Sbjct: 352 INMKPDDEKCSYMCETLYQRLIHGGFDPLLDDTNERPGSKFATMDLIGLPIQMIIGPKSA 411

Query: 615 SERSIGIRRFGSTTTQKVSLLDAIPILT 642
           ++  + I+   +   + +++  A+   +
Sbjct: 412 AQNEVEIKDRKTDAREILTVEAALNRFS 439


>gi|270610574|ref|ZP_06221671.1| threonine--tRNA ligase [Haemophilus influenzae HK1212]
 gi|270318077|gb|EFA29334.1| threonine--tRNA ligase [Haemophilus influenzae HK1212]
          Length = 151

 Score =  187 bits (475), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 61/146 (41%), Positives = 91/146 (62%)

Query: 499 DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVT 558
           DF LP R +A YV   + +  PVMIHRA+ GSIERFIGI+ E + G  P WL+P QA+V 
Sbjct: 1   DFALPGRLDATYVAEDNSRKTPVMIHRAILGSIERFIGIITEEYAGFFPAWLAPTQAVVM 60

Query: 559 TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERS 618
            IT S  +Y Q++A  L    L ++TD RNE + +KIREH+++++P +++CGDKE +E  
Sbjct: 61  NITDSQADYVQKVAKQLSDVGLRVKTDLRNEKVGFKIREHTLRRVPYMLVCGDKEIAEGK 120

Query: 619 IGIRRFGSTTTQKVSLLDAIPILTKE 644
           + +R          ++ +   IL  +
Sbjct: 121 VAVRTRKGADLGTFTVEEFAEILKNQ 146


>gi|254455357|ref|ZP_05068786.1| prolyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211]
 gi|207082359|gb|EDZ59785.1| prolyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211]
          Length = 444

 Score =  187 bits (475), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 93/454 (20%), Positives = 170/454 (37%), Gaps = 51/454 (11%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        E++ + H+ + R      I +  +G+  W   G+K+ + +   +R +
Sbjct: 4   SKSFIPILKNNPSEAKIKSHQLMLRVGM---IKQASAGIYSWLPLGFKVMKKIEKIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
                 +EI  P +    +W++SG +D Y   M  +K      +  R     P N     
Sbjct: 61  QDKIGAQEILMPTIQSSEIWKESGRYDDYGEEMLRIKD-----RQNREMLYGPTNEEQVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNEC 404
            +F   LKSY+ LP  L      +R+E      G+MR R F   DA+ F  T E  F   
Sbjct: 116 EIFRSSLKSYKSLPQLLYHIQWKFRDEIRPRF-GIMRGREFYMKDAYSFDITDEDAFFSY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL--------------------WDDA 444
            K     +  +K      I +   T P     S                        +D 
Sbjct: 175 NKFFLSYLRTFKRLSLTAIPMAADTGPIGGNLSHEFIILADTGESKIFTDKRIFDLTNDD 234

Query: 445 ENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIG---RDWQCGTIQVDFN 501
             + K  L+ ++   +        + +  F   +FE ++ +      +  + G I    +
Sbjct: 235 TELEKSSLEQMRKRYEK----FYSVTDEKFNKVEFEKMVSEENRLITKGIEVGHIFYFGD 290

Query: 502 LPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI------ENFKGNLPLWLSPIQA 555
             S+     V+    K   V +     G   R +G +I      EN     PL ++P   
Sbjct: 291 KYSKAMDTAVDLPGGKKDFVKMGSYGIGVS-RLVGAIIEAKYDDENEIMKWPLSVAPYDI 349

Query: 556 IVTTITSS----AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
            +  + +     A+E A +I + L  +++    D  +E  + KI++ ++   P  II G 
Sbjct: 350 ALIPMINKNDNSALEKANKINSELIRNNIEAIIDDTDENYSSKIKKMNLIGAPYQIIIGK 409

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           K  S+  +   +     TQ +SL   I I+TK+ 
Sbjct: 410 K--SDGDLLEFKEPGGETQNLSLEKIIEIITKQK 441


>gi|320100286|ref|YP_004175878.1| prolyl-tRNA synthetase [Desulfurococcus mucosus DSM 2162]
 gi|319752638|gb|ADV64396.1| prolyl-tRNA synthetase [Desulfurococcus mucosus DSM 2162]
          Length = 480

 Score =  187 bits (475), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 75/426 (17%), Positives = 157/426 (36%), Gaps = 56/426 (13%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
                    +     +  + +E  +  I     G+  W   G K  +     +   +++ 
Sbjct: 4   RKSIGIDKYKDFPEWYHSVLKEAGIIDIRYPVKGMNVWMPYGLKALRLTQRILMDLLEET 63

Query: 290 DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
            ++E   P ++ + ++ ++      +    F V+    T K      ++P +      ++
Sbjct: 64  GHQEAYFPTMVPESVFSREKDFLKGFGGETFVVEGT-VTRKFNERLFVRPTSETVMYYMW 122

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRG-FTQDDAHV-FCTKEQMFNECLK 406
           N  +K  ++LP+++ +  +V+R E     H ++RVR      +AH    T E+   +  +
Sbjct: 123 NMWIKGRKDLPLKMYQVVNVFRYETK-MTHPILRVREIMGFIEAHTAHATMEEAEKQISE 181

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
              +    +        +VK              WD                        
Sbjct: 182 AIAIYKEFFNRLQLPYFIVKTPP-----------WDTF---------------------- 208

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
                GA Y   F  ++ D  G +     I +       F   Y+++   + H   +++ 
Sbjct: 209 ----AGAEYNYDFITVMPDGKGLEL-GSVINLGQKFAKAFEIKYMDTDGVEKH---VYQT 260

Query: 527 VFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTIT----SSAVEYAQEIANLLKSH 578
            +G  ER +G +I    +      P  ++PIQ ++  +     +  +EYA +++N+LK+H
Sbjct: 261 CYGVSERVLGAVIGIHGDETGLFFPPDIAPIQVVIVPVMKPGENQVLEYAFKVSNILKAH 320

Query: 579 HLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
            + +  D   E T  +K     +K +P  I  G KE    ++ I R        V L +A
Sbjct: 321 GVRVFVDTDQEHTPGWKYYYWEMKGVPTRIEVGRKELDASTVTIARRDKREKHVVKLEEA 380

Query: 638 IPILTK 643
           + +L K
Sbjct: 381 VDLLRK 386


>gi|163740902|ref|ZP_02148295.1| prolyl-tRNA synthetase [Phaeobacter gallaeciensis 2.10]
 gi|161385893|gb|EDQ10269.1| prolyl-tRNA synthetase [Phaeobacter gallaeciensis 2.10]
          Length = 451

 Score =  187 bits (475), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 75/449 (16%), Positives = 152/449 (33%), Gaps = 43/449 (9%)

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLF--HIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
             L++Y   + +    + + ++    L    I +  +G+  W   G+K+ + + + +  +
Sbjct: 1   MRLSRYFLPVLKENPSEAQIVSHRYMLRAGMIKQSAAGIYSWLPLGFKVLKKIETIVHEE 60

Query: 287 -IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            ++  +  +  P +    LW++SG +D Y   M  +     + +  R     P N     
Sbjct: 61  QMRAGHIPMLMPTLQSADLWKESGRYDDYGQEMLRI-----SDRHGRDMLYGPTNEELIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNEC 404
            +F   + SY++LP+ L      +R+E      G+MR R F   D + F  TKE   +  
Sbjct: 116 DIFRSHVGSYKDLPLTLYHIQWKFRDEIRPRF-GVMRGREFYMKDGYNFDLTKEDALHAY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL-----WDDAENIMKGVLDTIKNSS 459
            +     +  Y+  G + I ++    P     +          ++E      +  +    
Sbjct: 175 NRHLVSYLRSYERMGLQAIPMRADGGPIGGDYTHEFLVLADTGESEVFYDSAVTDL-TFG 233

Query: 460 QDRINT-------GVLLGEGAFYGPKFEYILKDAIG----------RDWQCGTIQV-DFN 501
              I+        GVL    + Y    E   +              R  + G I      
Sbjct: 234 DRAIDYDSVEQCQGVLEEFTSKYARTDETHDEALFNEVPEERRRVARGIEVGQIFYFGTK 293

Query: 502 LPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNLPLWL---SPIQAIV 557
                 A        K  PV +     G   R +G +IE +      +W    +P    +
Sbjct: 294 YSEALGANVQGPDG-KQSPVHMGSHGIGVS-RLLGAIIEASHDDKGIIWPEGVTPFHCGI 351

Query: 558 TTITSSAVEY---AQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
             +     E     + +   L +  L    D R E    K     +  +P  I  G +  
Sbjct: 352 VNLKQGDAEADAACESLYEALTAAGLEPLYDDRKERAGGKFATMDLIGLPWRITVGPRGL 411

Query: 615 SERSIGIRRFGSTTTQKVSLLDAIPILTK 643
               + +    S  ++++S   A+  + +
Sbjct: 412 KNGVVELTSRRSGESEELSPEAAVQKIVE 440


>gi|328951623|ref|YP_004368958.1| Prolyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884]
 gi|328451947|gb|AEB12848.1| Prolyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884]
          Length = 477

 Score =  187 bits (474), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 71/419 (16%), Positives = 151/419 (36%), Gaps = 61/419 (14%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
                   + ++ +  +L        G       G+ +++ +   +    K   ++ +  
Sbjct: 10  QSVDFSEWYLEVIQRAELADYGPVR-GTTVLRPYGYALWENIQRTLDEMFKATGHQNVYF 68

Query: 297 PQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P  +    ++ ++ H + +   +  V  A     +    A++P +      ++   ++SY
Sbjct: 69  PLFIPMSFFEREAEHVEGFSPELAVVTHAGGDALE-EPLAVRPTSETIIGHMWAKWIRSY 127

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISI 414
           R+LP  L ++G+V R E        +R   F   + H    T+E+   E  ++  +  ++
Sbjct: 128 RDLPQLLNQWGNVVRWEMR--TRPFLRTSEFLWQEGHTAHATQEEAEAETRRMLGVYATL 185

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
                                                 +       + + T      GA 
Sbjct: 186 ------------------------------------AREYAAIPVWEGMKTESEKFAGAV 209

Query: 475 YGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           Y    E +++D  G+  Q GT      N    F+  + +   E  +   +H   +G   R
Sbjct: 210 YTTTIEAMMRD--GKALQAGTSHYLGTNFAKAFDIKFQDRDLETKY---VHTTSWGLSWR 264

Query: 534 FIGIMIENFKGN----LPLWLSPIQAIVTTITSS-----AVEYAQEIANLLKSHHLSIET 584
           FIG +I     +    LP  L+PIQ ++  I         +E AQ +   LK+  + +  
Sbjct: 265 FIGAIIMTHGDDKGLILPPKLAPIQVVIVPIYKEATRARVLEAAQALEQRLKAQGVRVHL 324

Query: 585 DFRNE-TINYKIREHSIKKIPIIIICGDKEASERS-IGIRRFGSTTTQKV-SLLDAIPI 640
           D R++ T  YK  +  ++ +P  +  G ++    + +   R G   T  +  L +A+P 
Sbjct: 325 DDRDQYTPGYKFNDWELRGVPYRVELGPRDVESGTAVLASRLGGKETLPLEGLAEAVPQ 383


>gi|307595133|ref|YP_003901450.1| prolyl-tRNA synthetase [Vulcanisaeta distributa DSM 14429]
 gi|307550334|gb|ADN50399.1| prolyl-tRNA synthetase [Vulcanisaeta distributa DSM 14429]
          Length = 489

 Score =  187 bits (474), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 71/429 (16%), Positives = 150/429 (34%), Gaps = 61/429 (14%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
              +       +       +  E +++       G   W   G +I + + SY+R    +
Sbjct: 9   PREKRPREKWRNFTDWFNWIIMETEVYDFRYPVKGAYVWRPYGMRIRRLVESYVRLVHDE 68

Query: 290 -DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
             ++E+  P  +    + ++S H   +   +F V              L+P +    + +
Sbjct: 69  TGHQEVLFPVFIPYEFFSKESEHIRGFENEVFWVSKGGTG---EERLVLRPTSETAMMPM 125

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD-DAHVFCTK-EQMFNECL 405
           F   +K + +LP ++ +  SV+R E   +   ++R+R  +   +AH      E    +  
Sbjct: 126 FKLWIKDHTDLPFKVYQIVSVFRAETK-ATRPMIRLREISMFKEAHTAHANREDAERQIK 184

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
           +   +   I+       ++ +              WD                       
Sbjct: 185 EAMEIYKKIFDYLSIPYLISQRPE-----------WDKF--------------------- 212

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIH 524
                 GA Y   F+ ++ D  G+  Q GT+     N    F+  Y+    +  +   +H
Sbjct: 213 -----AGAVYTIAFDTVMPD--GKTMQIGTVHYLGTNFSRVFDVRYLTPSGDWEY---VH 262

Query: 525 RAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVEYA-----QEIANLL 575
              +G  ER I  MI    ++    LP  ++PIQ ++  I     E A     + I   L
Sbjct: 263 TTSYGISERVIAAMIAVHGDDKGLALPPNVAPIQVVIVPIMYKGTEEAIMREVKSITEEL 322

Query: 576 KSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
            +  + ++ D R ++T  +K     +  +P+ I  G K+   R + + R  +        
Sbjct: 323 TNAGIRVKVDDRTDKTPGWKYNYWEMMGVPLRIEIGPKDVENRQVVLARRDTMEKFVAPR 382

Query: 635 LDAIPILTK 643
              +  + +
Sbjct: 383 EGIVDTVKE 391


>gi|228913143|ref|ZP_04076782.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|228846548|gb|EEM91561.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
          Length = 502

 Score =  187 bits (474), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 86/446 (19%), Positives = 174/446 (39%), Gaps = 60/446 (13%)

Query: 213 NRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKG 272
            R  L  + G      +E  Q +  +EE   + +  + ++ +L   +    G +     G
Sbjct: 13  TRAFLYFLEGGRLTMAKEQVQAITKMEEDFAQWYTDIVKKAELVDYSSVK-GCMILRPYG 71

Query: 273 WKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKD 330
           + +++ +   M  K+K   +E +  P  + + L  ++  H + +   +  V    D    
Sbjct: 72  YALWENMQKVMDEKLKATGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGDEKLA 131

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
            R   ++P +       F+  ++SY +LP    ++ SV R E   +    +R   F   +
Sbjct: 132 ER-LCVRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEK--TTRPFLRTTEFLWQE 188

Query: 391 AH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMK 449
            H +  T E+   E L I NL  S  +D+    ++    T  EK  G+ A +        
Sbjct: 189 GHTIHETAEESQAETLNILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKATY-------- 240

Query: 450 GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNA 508
                                         E ++ D  G+  Q GT      N    F+ 
Sbjct: 241 ----------------------------TIESLMHD--GKALQTGTSHNFGTNFSEAFDI 270

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---T 561
            +++ + +  +   +H+  +G   R IG +I    +N    +P  ++P+Q ++  I    
Sbjct: 271 KFLDRNGKWQY---VHQTSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQVVIVPIAQHK 327

Query: 562 SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
              +  A E+   ++     ++ D  N+T  +K  E+ +K IPI +  G K+  +  + +
Sbjct: 328 EGVLAKATELQGHIQKV-ARVKIDASNKTPGWKFNEYEMKGIPIRLEVGPKDIEKNQVVL 386

Query: 622 RRFGSTTTQKVS---LLDAIPILTKE 644
            R  +   + +S   L + IP L +E
Sbjct: 387 VRRDTKEKEFISMDQLEERIPALLEE 412


>gi|325969359|ref|YP_004245551.1| prolyl-tRNA synthetase [Vulcanisaeta moutnovskia 768-28]
 gi|323708562|gb|ADY02049.1| prolyl-tRNA synthetase [Vulcanisaeta moutnovskia 768-28]
          Length = 510

 Score =  186 bits (473), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 78/457 (17%), Positives = 157/457 (34%), Gaps = 64/457 (14%)

Query: 205 GAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE---SEKRDHRKLAREMDLFHIAED 261
                 +  +  L +  G      Q +        E           +  E +L+     
Sbjct: 2   QHSQEHNVFKTFLKQQRGIFIAKLQLIKPGEKRPREKWKDFTDWFNWVIMETELYDYRYP 61

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMF 319
             G   W   G KI + + +Y+R    +  ++E+  P  +      ++S H   + + +F
Sbjct: 62  VKGAYVWRPYGMKIRRLVETYVRFLHDETGHQEVLFPVFIPYEFLAKESEHIRGFESEVF 121

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHG 379
            V        +     L+P +    + +F   +K + +LP R+ +  SV+R E   +   
Sbjct: 122 WVSKGG---ANEERLVLRPTSETAMMPMFKLWIKDHTDLPFRVYQIVSVFRAETK-ATRP 177

Query: 380 LMRVRGFTQD-DAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGS 437
           ++R+R  +   +AH      E    +  +   +   I+   G   ++ +           
Sbjct: 178 MIRLREISMFKEAHTAHADREDAERQVREAVEIYKKIFDYLGIPYLINQRPE-------- 229

Query: 438 DALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ 497
              WD                             GA Y   F+ ++ D  G+  Q GT+ 
Sbjct: 230 ---WDKF--------------------------AGAVYTMAFDTVMPD--GKTMQIGTVH 258

Query: 498 V-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSP 552
               N    F+  Y+  + +  +   +H   +G  ER I  MI    ++    LP  ++P
Sbjct: 259 YLGTNFSKVFDVKYLTPNGDWDY---VHTTSYGISERVIAAMIAMHGDDKGLVLPPNVAP 315

Query: 553 IQAIVTTITSSAVEYA-----QEIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPII 606
           IQ I+  I     E       + I   L +  + ++ D R + T  +K     +  +P+ 
Sbjct: 316 IQVIIIPIMYKGTEEIILRETRSIQEELSNVGIRVKIDDRTDRTPGWKYNYWEMLGVPLR 375

Query: 607 IICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           I  G K+   R + + R  +           +  + +
Sbjct: 376 IEIGPKDIENRQVVLARRDTLEKYVAPRDGIVDTVRE 412


>gi|332559243|ref|ZP_08413565.1| prolyl-tRNA synthetase [Rhodobacter sphaeroides WS8N]
 gi|332276955|gb|EGJ22270.1| prolyl-tRNA synthetase [Rhodobacter sphaeroides WS8N]
          Length = 445

 Score =  186 bits (471), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 79/449 (17%), Positives = 162/449 (36%), Gaps = 43/449 (9%)

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLF--HIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
             L++Y   + +    + + ++    L    I +  +G+  W   G+K+ + +   +  +
Sbjct: 1   MRLSRYFLPVLKENPSEAQIVSHRYMLRAGMIKQQAAGIYSWLPLGFKVLKRIEQIVHEE 60

Query: 287 -IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            I+  +  +  P +    LW++SG +D Y   M  +     T +  R     P N     
Sbjct: 61  QIRAGHIPLLMPTLQPADLWRESGRYDDYGEEMLRI-----TDRHKRDMLYGPTNEEMIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +F   + SY++LP+ L      +R+E      G+MR R F   D + F    E   +  
Sbjct: 116 DIFRSHVSSYKDLPLTLYHIQWKFRDEIRPRF-GVMRGREFLMKDGYNFDLDYESAIHAY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL-----WDDAENIMKGVLDTIK--- 456
            +     +  Y+  G + I ++ ++ P     +          ++E      +  +K   
Sbjct: 175 NRHMVSYLRTYERMGLQAIPMRAASGPIGGDNTHEFLVLASTGESEVFYDAAITDLKFGD 234

Query: 457 --NSSQDRINTGVLLGE-GAFYGPKFEYILKD----------AIGRDWQCGTIQV-DFNL 502
              +  DR     ++ E  A Y    E   +              R  + G I       
Sbjct: 235 RVVNYDDRAECEAIVKEWTAPYARTDETHDEAIFAQIPEERRRSSRGIEVGQIFYFGTKY 294

Query: 503 PSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGNLPLWL---SPIQAIV 557
                A  V +   +   V +H    G  + R +G +IE +      +W    +P  A +
Sbjct: 295 SEPMGATVVTAGGNR---VPVHMGSHGIGVSRLLGAIIEASHDDKGIIWPEGVTPFHAGI 351

Query: 558 TTI--TSSAVEYAQE-IANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
             +    S+ + A E +   L +  L    D R+E    K     +  +P  I  G +  
Sbjct: 352 VNLKQGDSSTDLACEALYRDLSARGLEPLYDDRDERAGAKFATMDLIGLPWRITVGPRGI 411

Query: 615 SERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +   + +    +  ++++S   A+  L +
Sbjct: 412 AAGKVELTNRRTGESEEMSSGAAVDRLAQ 440


>gi|166033170|ref|ZP_02235999.1| hypothetical protein DORFOR_02892 [Dorea formicigenerans ATCC
           27755]
 gi|166027527|gb|EDR46284.1| hypothetical protein DORFOR_02892 [Dorea formicigenerans ATCC
           27755]
          Length = 480

 Score =  186 bits (471), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 77/439 (17%), Positives = 160/439 (36%), Gaps = 58/439 (13%)

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR 284
               ++L + +   +E   + +  + RE  L   +    G + +   G+ I++ + + + 
Sbjct: 1   MAKDKKLVKNITSRDEDFAQWYTDVVREAQLCDYSSVK-GCLNYLPNGFAIWELIKADLD 59

Query: 285 RKIKDDYEE-INTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
           R+ K+   E +  P ++ + L + ++ H + +   +  V          R F ++P +  
Sbjct: 60  RRFKETGVENVYLPCLIPEALLEKEADHIEGFAPEVAWVTHGGMERLQER-FCVRPTSET 118

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMF 401
               ++   ++SYR+LP    ++ SV R E   +    +R R F   + H    T E+  
Sbjct: 119 LFCDLWARTVQSYRDLPKVWNQWCSVLRWEK--TTRPFLRSREFLWQEGHTIHATYEEAE 176

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
              +++  +    YK                                    +T+      
Sbjct: 177 QRTIQMWQIYKDFYK------------------------------------ETMAVPFVA 200

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHP 520
                     GA      E ++ D  G+  Q  T        P  F   Y++  ++  + 
Sbjct: 201 GRKAEHEKFAGAQDTYTVEALMHD--GKALQSATSHFFGSGFPEAFGIQYIDKDNQLKN- 257

Query: 521 VMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIAN 573
             ++   +G   R IG +I    ++    +P  L+P++  V  I       +E A E+ +
Sbjct: 258 --VYETSWGLSTRSIGALIMVHGDDDGLVIPPHLAPVECRVIPIAQHKEGVLEKANELLD 315

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            LK     ++ D   ++  +K  E  I  IP  I  G K+     + + R  +     VS
Sbjct: 316 ELKKAGYRVKIDDSEKSPGWKFSEQEILGIPTRIEIGPKDIENNQVVVVRRDTREKIVVS 375

Query: 634 LLDAIPILTK--ESLPPDC 650
           L +    L +  E++  D 
Sbjct: 376 LDEITTKLREILETIQQDM 394


>gi|228956855|ref|ZP_04118640.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228802896|gb|EEM49729.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis serovar pakistani
           str. T13001]
          Length = 502

 Score =  186 bits (471), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 88/446 (19%), Positives = 173/446 (38%), Gaps = 60/446 (13%)

Query: 213 NRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKG 272
            R  L  + G      +E  Q +  +EE   + +  + ++ +L   +    G +     G
Sbjct: 13  TRAFLYFLEGGRLTMAKEQVQAITKMEEDFAQWYTDIVKKAELVDYSSVK-GCMILRPYG 71

Query: 273 WKIFQTLISYMRRKIKDDYEE-INTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKD 330
           + +++ +   M  K+K+   E +  P  + + L  ++  H + +   +  V    D    
Sbjct: 72  YALWENMQKVMDEKLKETDHENVYMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGDEKLA 131

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
            R   ++P +       F+  ++SY +LP    ++ SV R E   +    +R   F   +
Sbjct: 132 ER-LCVRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEK--TTRPFLRTTEFLWQE 188

Query: 391 AH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMK 449
            H +  T E+   E L I NL  S  +D+    ++    T  EK  G+ A +        
Sbjct: 189 GHTIHETAEESQAETLNILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKATY-------- 240

Query: 450 GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNA 508
                                         E ++ D  G+  Q GT      N    F+ 
Sbjct: 241 ----------------------------TIESLMHD--GKALQTGTSHNFGTNFSEAFDI 270

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSA 564
            +++ + +  +   +H+  +G   R IG +I    +N    +P  ++P+Q ++  I    
Sbjct: 271 KFLDRNGKWQY---VHQTSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQVVIVPIAQ-H 326

Query: 565 VEYAQEIANLLKSHHL---SIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
            E     A  L++H      ++ D  N+T  +K  E+ +K IPI +  G K+  +  + +
Sbjct: 327 KEGVLAKATELQAHIQKVARVKIDASNKTPGWKFNEYEMKGIPIRLEVGPKDIEKNQVVL 386

Query: 622 RRFGSTTTQKVS---LLDAIPILTKE 644
            R  +   + V    L + IP L +E
Sbjct: 387 VRRDTKEKEFVPMDQLEERIPALLEE 412


>gi|146304669|ref|YP_001191985.1| prolyl-tRNA synthetase [Metallosphaera sedula DSM 5348]
 gi|172046942|sp|A4YI09|SYP_METS5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|145702919|gb|ABP96061.1| prolyl-tRNA synthetase [Metallosphaera sedula DSM 5348]
          Length = 480

 Score =  186 bits (471), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 79/442 (17%), Positives = 166/442 (37%), Gaps = 64/442 (14%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           +         +       +  + +++        G   W   G+KI Q + + +R+ + +
Sbjct: 1   MKISREKWSSNFSEWFDWVISQAEIYDYGRYPVKGSGVWMPYGFKIRQNVTTLIRKLLDE 60

Query: 290 -DYEEINTPQVLDQHL-WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
             +EE+  P ++ + L  +++ H   +   +F V    +   + R FAL+P +      +
Sbjct: 61  TGHEEVLFPLLIPETLLKKEAEHIKGFEKEVFWVTHGGEDELEER-FALRPTSEVAITLM 119

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF-TQDDAHVFCTK-EQMFNECL 405
            +  +K Y +LP +  +  SV+R E   +   ++RVR   T  +AH      E    +  
Sbjct: 120 ESLWIKGYSQLPRKFYQIVSVFRYETK-ATRPMIRVRELSTFKEAHTVHETFEDAARQVD 178

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
           +   +    +   G   ++ +              WD                       
Sbjct: 179 EAVEIYSKFFDILGIPYLISRRPE-----------WDKF--------------------- 206

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN-SHSEKCHPVMIH 524
                 GA Y    + I+ D  GR  Q GT        ++   + V  +     HP   H
Sbjct: 207 -----AGAEYTIALDTIMPD--GRALQIGTAHHLGQHFTKAMDYKVQRADGSHVHP---H 256

Query: 525 RAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI-------TSSAVEYAQEIAN 573
           +  +G  +R I  +I    ++    LP  ++PI+ ++  I       T    +YA E+ +
Sbjct: 257 QTSYGISDRVIATVISINGDDHGPILPPVVAPIEGVIIPIPGKSEEDTEKINKYAMEVES 316

Query: 574 LLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
           +LK+  + +  D   ++T   K     +K +PI I  G +E +  +  ++R  +   + V
Sbjct: 317 VLKNSGIRVALDASEDKTPGEKYYIWELKGVPIRIEIGPRELNSGTAFLKRRDTLEGKSV 376

Query: 633 SLLDAIPILT--KESLPPDCQK 652
              + +      ++ +  D +K
Sbjct: 377 KREELVKEFRNLEDQISADLRK 398


>gi|118415374|gb|ABK83793.1| prolyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
          Length = 502

 Score =  186 bits (471), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 86/446 (19%), Positives = 173/446 (38%), Gaps = 60/446 (13%)

Query: 213 NRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKG 272
            R  L  + G      +E  Q +  +EE   + +  + ++ +L   +    G +     G
Sbjct: 13  TRAFLYFLEGGRLTMAKEQVQAITKMEEDFAQWYTDIVKKAELVDYSSVK-GCMILRPYG 71

Query: 273 WKIFQTLISYMRRKIKDDYEE-INTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKD 330
           + +++ +   M  K+K    E +  P  + + L  ++  H + +   +  V    D    
Sbjct: 72  YALWENMQKVMDEKLKATSHENVYMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGDEKLA 131

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
            R   ++P +       F+  ++SY +LP    ++ SV R E   +    +R   F   +
Sbjct: 132 ER-LCVRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEK--TTRPFLRTTEFLWQE 188

Query: 391 AH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMK 449
            H +  T E+   E L I NL  S  +D+    ++    T  EK  G+ A +        
Sbjct: 189 GHTIHETAEESQAETLNILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKATY-------- 240

Query: 450 GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNA 508
                                         E ++ D  G+  Q GT      N    F+ 
Sbjct: 241 ----------------------------TIESLMHD--GKALQTGTSHNFGTNFSEAFDI 270

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---T 561
            +++ + +  +   +H+  +G   R IG +I    +N    +P  ++P+Q ++  I    
Sbjct: 271 KFLDRNGKWQY---VHQTSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQVVIVPIAQHK 327

Query: 562 SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
              +  A E+   ++     ++ D  N+T  +K  E+ +K IPI +  G K+  +  + +
Sbjct: 328 EGVLAKATELQGHIQKV-ARVKIDASNKTPGWKFNEYEMKGIPIRLEVGPKDIEKNQVVL 386

Query: 622 RRFGSTTTQKVS---LLDAIPILTKE 644
            R  +   + +S   L + IP L +E
Sbjct: 387 VRRDTKEKEFISMDQLEERIPALLEE 412


>gi|124486203|ref|YP_001030819.1| prolyl-tRNA synthetase [Methanocorpusculum labreanum Z]
 gi|152112928|sp|A2ST96|SYP_METLZ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|124363744|gb|ABN07552.1| prolyl-tRNA synthetase [Methanocorpusculum labreanum Z]
          Length = 477

 Score =  186 bits (471), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 72/423 (17%), Positives = 161/423 (38%), Gaps = 59/423 (13%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQ-H 303
            + ++ R  D+  +     G+  W+  G+ +     + +R  +  D+EE   P ++ +  
Sbjct: 17  WYNEVIRRADIMDVRYPVKGLYVWYPFGFALRNHTYTLLRSLLNRDHEETLFPLLIPETE 76

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
             +++ H   +   ++ V     +  D++  AL+P +      ++   ++S+ +LP++L 
Sbjct: 77  FMKEAEHIKGFEDEVYWVTHGGLSPLDVK-LALRPTSETAIYPMYALWVRSHADLPLKLY 135

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFT-QDDAHVFCTKEQMFNECLKI-HNLIISIYKDFGFE 421
           +  + +R E       L+R+R  T   ++H   T     N+ ++    L    Y+D G  
Sbjct: 136 QVVNTFRYETK-HTRPLIRLREITSFMESHTVHTDWDDANKQVEYELGLATEFYRDLGVP 194

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            I+ +              WD                             GA +    + 
Sbjct: 195 IIISRRPD-----------WDKF--------------------------PGADFTMAIDA 217

Query: 482 ILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           ++ D  GR  Q GT+  +  +  + +N  Y + + E+    +  +  FG  ER I  +I 
Sbjct: 218 VMPD--GRTLQIGTVHHLGDHFSTTYNITYEDVNGEQK---LASQTCFGISERCIAAIIA 272

Query: 541 NFKGNLPLWL----SPIQAIVTTI-----TSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
               +  L L    +P Q ++  I         +   +++ + LK+  L ++TD R+   
Sbjct: 273 VHGDDKGLVLPATVAPTQVVIIPIIVGKRGDEIMAAVEKLESELKAAGLRVKTDARDMRP 332

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ--KVSLLDAIPILTKESLPPD 649
             K     +  +P+ +  G ++     +         T   + +  D++  L  E+    
Sbjct: 333 GAKYYHWELHGVPLRVELGPRDLDNNQLVCANRLGVKTTIPRENAADSVKRLLDEAHDQI 392

Query: 650 CQK 652
            +K
Sbjct: 393 LEK 395


>gi|114769540|ref|ZP_01447166.1| prolyl-tRNA synthetase [alpha proteobacterium HTCC2255]
 gi|114550457|gb|EAU53338.1| prolyl-tRNA synthetase [alpha proteobacterium HTCC2255]
          Length = 446

 Score =  186 bits (471), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 79/447 (17%), Positives = 156/447 (34%), Gaps = 40/447 (8%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-R 285
           ++  L        +++   HR + R   +       SG+  W   G+K+ + L + +   
Sbjct: 4   SKYFLPILKENPSDAQIASHRLMLRAGMIRQAQ---SGIYSWLPMGYKVLRKLENIVHDE 60

Query: 286 KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +I+  +  +  P +    LW++SG +D Y   M  +     T +  R     P N     
Sbjct: 61  QIRAGHNPMLMPTIQSADLWRESGRYDDYGKEMLRI-----TDRHGRDMLFGPTNEELIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT-KEQMFNEC 404
            +F + +KSY++LP+ L      +R+E      G+MR R F   D + F   KE   +  
Sbjct: 116 DIFRNSVKSYKDLPMTLYHIQWKFRDEVRPRF-GVMRGREFLMKDGYNFDLNKEAAMHSY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN------IMKGVLD-TIKN 457
            +     +  Y+  G + I ++  + P     +      A+         + +LD ++ +
Sbjct: 175 NRHMVSYLRTYERMGMKAIPMRADSGPIGGEDTHEFLVLADTGESEVFFDRNILDLSLGD 234

Query: 458 SSQDRINTGVLLGEGAFYG-----------PKFEYILKDA---IGRDWQCGTIQVDFNLP 503
              D  N          +            P+    + D      R  + G I       
Sbjct: 235 KEIDYNNWDECASIFKEWTTPYARTDETHNPELFAKIPDERQMTSRGIEVGQIFYFGTKY 294

Query: 504 SRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTT 559
           S      V++ ++   PV +     G   R +G +IE          P  +SP    +  
Sbjct: 295 SESMNAKVSTPNDGEIPVHMGSHGIGVS-RMVGAIIEASHDENGIIWPEAVSPFGVGIVN 353

Query: 560 I--TSSAVEYAQE-IANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASE 616
           +       + A E +        +    D R+E    K     +  +P  I  G +    
Sbjct: 354 LKQGDDQADLACENLYKSASLLGIDPLYDDRSERAGAKFASMDLIGLPWRITVGPRGLKN 413

Query: 617 RSIGIRRFGSTTTQKVSLLDAIPILTK 643
             + +    +  ++++    A+  L K
Sbjct: 414 GVVELTCRRTGVSEELPPELAMEKLAK 440


>gi|40063567|gb|AAR38356.1| prolyl-tRNA synthetase [uncultured marine bacterium 582]
          Length = 445

 Score =  185 bits (470), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 74/445 (16%), Positives = 151/445 (33%), Gaps = 38/445 (8%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   HR + R      I +  +G+  W   G+K+ + +   +  +
Sbjct: 4   SRYFMPVLKENPVDAQIVSHRLMLRAGM---IKQSSAGIYSWLPMGFKVLKKIEDIVHEE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +   +  +  P +    LW++SG +D++   M  +K   D     R     P       
Sbjct: 61  QQRAGHMPMLMPTIQSADLWRESGRYDAFGDEMLRIKDRHD-----RDMLFTPTAEELIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNEC 404
            +F   + SY++LP+ L +    +R+E      G+MR R F   D + F  TKE   +  
Sbjct: 116 DIFRAHVGSYKDLPLTLYQIQWKFRDEIRPRF-GVMRGREFYMKDGYNFDLTKEAALHAY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNS----SQ 460
            +     +  Y+  G + I ++  +       +      AE     V      +      
Sbjct: 175 NRHLVSYLRTYERMGLQAIPMRADSGAMGGDNTHEFLVLAETGESEVFYDSAVTDLTFGD 234

Query: 461 DRINT-------GVLLGEGAFYGPKFEYILKDAIG-----RDWQCGTI---QVDFNLPSR 505
             I+        GVL      Y    E   +         R      I   Q+ +     
Sbjct: 235 RAIDYDSVAQCQGVLEEFTTKYARTDETHDEALFNQIPEERRRVARGIEVGQIFYFGTKY 294

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGNLPLWL---SPIQAIVTTI 560
             A        +     +H    G  + R +G +IE +      +W    +P    +  +
Sbjct: 295 SEALNATVDDGQGGKTPVHMGSHGIGVSRLLGAIIEASHDDKGIIWPEGVTPFHCGIVNL 354

Query: 561 --TSSAVEYAQE-IANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASER 617
                A + A + + + L +  L    D R E    K     +  +P  I  G +     
Sbjct: 355 KQGDEAADAACDGLYSALTNAGLEPLYDDRKERAGGKFATMDLIGLPWRITVGPRGLKNG 414

Query: 618 SIGIRRFGSTTTQKVSLLDAIPILT 642
            + +    S  +++++   A+  + 
Sbjct: 415 VVEVTSRRSGVSEEMTPEAAVAKVV 439


>gi|228919324|ref|ZP_04082694.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228840431|gb|EEM85702.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 502

 Score =  185 bits (470), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 88/445 (19%), Positives = 174/445 (39%), Gaps = 60/445 (13%)

Query: 214 RPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGW 273
           R  L  + G      +E  Q +  +EE   + +  + ++ +L   +    G +     G+
Sbjct: 14  RAFLYFLEGGRLTMAKEQVQAITKMEEDFAQWYTDIVKKAELVDYSSVK-GCMILRPYGY 72

Query: 274 KIFQTLISYMRRKIK-DDYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDL 331
            +++ +   M  K+K   +E +  P  + + L  ++  H + +   +  V    D     
Sbjct: 73  ALWENMQKVMDEKLKGTGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGDEKLAE 132

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
           R   ++P +       F+  ++SY +LP    ++ SV R E   +    +R   F   + 
Sbjct: 133 R-LCVRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEK--TTRPFLRTTEFLWQEG 189

Query: 392 H-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKG 450
           H +  T E+   E L I NL  S  +D+    ++    T  EK  G+ A +         
Sbjct: 190 HTIHETAEESQAETLNILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKATY--------- 240

Query: 451 VLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAF 509
                                        E ++ D  G+  Q GT      N    F+  
Sbjct: 241 ---------------------------TIESLMHD--GKALQTGTSHNFGTNFSEAFDIK 271

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAV 565
           +++ + +  +   +H+  +G   R IG +I    +N    +P  ++P+Q ++  I     
Sbjct: 272 FLDRNGKWQY---VHQTSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQVVIVPIAQ-HK 327

Query: 566 EYAQEIANLLKSHHL---SIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           E     A  L++H      ++ D  N+T  +K  E+ +K IPI +  G K+  ++ + + 
Sbjct: 328 EGVLAKATELQAHIQKVARVKIDASNKTPGWKFNEYEMKGIPIRLEVGPKDIEKKQVVLV 387

Query: 623 RFGSTTTQKVS---LLDAIPILTKE 644
           R  +   + V    L + IP L +E
Sbjct: 388 RRDTKEKEFVPMDQLEERIPALLEE 412


>gi|126466059|ref|YP_001041168.1| prolyl-tRNA synthetase [Staphylothermus marinus F1]
 gi|126014882|gb|ABN70260.1| prolyl-tRNA synthetase [Staphylothermus marinus F1]
          Length = 493

 Score =  185 bits (470), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 74/424 (17%), Positives = 155/424 (36%), Gaps = 56/424 (13%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-D 290
            ++         + + ++ +   +        G+  W   G K  + +   M   +++  
Sbjct: 18  ERFRLDKYADFPKWYHEILKHAKIVDTRYPVKGMNVWMPYGLKALRMIQKIMINLLEETG 77

Query: 291 YEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
           +EE   P ++ + ++ ++      +    F V+    T K      ++P +      ++N
Sbjct: 78  HEEAYFPTMIPESVFSKEKDFLQGFGGETFVVEGT-MTKKFNEKLFVRPTSETVMYYMWN 136

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRG-FTQDDAHV-FCTKEQMFNECLKI 407
             +K  ++LP+++ +  +V+R E     H ++RVR   +  +AH    T E+   +  + 
Sbjct: 137 IWIKGRKDLPLKMYQVVNVFRYETK-MTHPILRVREIMSFIEAHTAHATSEEAEKQINEA 195

Query: 408 HNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGV 467
            ++    +        +VK              WD                         
Sbjct: 196 LSIYKKFFDSLLLPYFIVKTPP-----------WDTF----------------------- 221

Query: 468 LLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAV 527
               GA Y   F   + D  G +     I +       F+  +++S     H   +++  
Sbjct: 222 ---AGAEYNYDFITAMPDGKGLEL-GSVINLGQKFARAFDIKFMDSDGVTKH---VYQTC 274

Query: 528 FGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTIT----SSAVEYAQEIANLLKSHH 579
           +G  ER +G +I    +     LP  ++PIQ ++  I        +EYA++I+  LK   
Sbjct: 275 YGVSERTLGAVIAIHGDQKGLFLPPIIAPIQVVIVPIARRDEQDIIEYAKKISEKLKKAG 334

Query: 580 LSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           +    D   E T  +K     +K +P  I  G +E +  ++ I R        VS+ D +
Sbjct: 335 IRTFLDDDPEHTPGWKYYFWEMKGVPTRIEIGRRELNNNTVTIARRDGAKKITVSINDMV 394

Query: 639 PILT 642
             L 
Sbjct: 395 DKLR 398


>gi|254166566|ref|ZP_04873420.1| prolyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|289596405|ref|YP_003483101.1| prolyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|197624176|gb|EDY36737.1| prolyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|289534192|gb|ADD08539.1| prolyl-tRNA synthetase [Aciduliprofundum boonei T469]
          Length = 465

 Score =  185 bits (470), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 74/422 (17%), Positives = 163/422 (38%), Gaps = 58/422 (13%)

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEE 293
           + F +E+    + ++     L        G+  W   GW++ + +  Y R+   +  ++E
Sbjct: 1   MEFPKENFSEWYNEVIETAGLVDKRYPVKGMHVWLPYGWQLMRNIDEYFRKVFTEHKHQE 60

Query: 294 INTPQVLDQ-HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           +  P ++ +    +++ H + +   ++ V        D++   ++P +      +F+  +
Sbjct: 61  VYFPLLIPETEFKKEAEHIEGFENEVYWVTHGGLDPLDVK-LVVRPTSETAMYPMFSLWI 119

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLI 411
           +S+ +LP+R+ +  +V+R E        +RVR     ++H    T E+   +        
Sbjct: 120 RSHADLPLRIFQIVNVFRYETK-QTRTFIRVREVHFFESHTAHATAEESEEQIK------ 172

Query: 412 ISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
                                    +  +W    + +      ++ +  D+         
Sbjct: 173 ------------------------DNIEIWKKVADKLALPYVLVRKTDWDKFP------- 201

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           GA Y    E I+    GR  Q  TI Q   N    +   Y+       +   +H+  FG 
Sbjct: 202 GAAYSIGAETIMP--SGRTLQIATIHQYFQNFSKPYGIEYLKEDGTHDY---VHQTTFGM 256

Query: 531 IERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVE----YAQEIANLLKSHHLSI 582
            ER +G ++    +N    LP  ++PIQ ++  I +   E     A++I N LK     +
Sbjct: 257 SERLVGAIVGIHGDNRGLILPPEIAPIQVVIVPIVNKNKEGILQEARKIENELKEL-YRV 315

Query: 583 ETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
             D R+  T  YK  +  +K +P+ +  G ++  +  + + R  +     VS  + +  +
Sbjct: 316 HLDDRDNYTPGYKFYDWELKGVPLRLEIGPRDLEKGQVVLVRRDNFEKMFVSRKEYVDRI 375

Query: 642 TK 643
            +
Sbjct: 376 GE 377


>gi|153816280|ref|ZP_01968948.1| hypothetical protein RUMTOR_02529 [Ruminococcus torques ATCC 27756]
 gi|317502163|ref|ZP_07960339.1| proline-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|331088732|ref|ZP_08337642.1| prolyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA]
 gi|145846463|gb|EDK23381.1| hypothetical protein RUMTOR_02529 [Ruminococcus torques ATCC 27756]
 gi|316896439|gb|EFV18534.1| proline-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|330407255|gb|EGG86758.1| prolyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA]
          Length = 480

 Score =  185 bits (470), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 81/438 (18%), Positives = 162/438 (36%), Gaps = 56/438 (12%)

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR 284
              +++L Q +   +E   + +  + RE  L   +    G + +   G+ I++ + S + 
Sbjct: 1   MAKEKKLVQSITSRDEDFAQWYTDVVREAKLCDYSGVK-GCLNYLPNGYAIWENIQSDLD 59

Query: 285 RKIKDDYEE-INTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
           ++ KD   E +  P ++ + L  ++  H + +   +  V          R F ++P +  
Sbjct: 60  KRFKDTGVENVYLPVLIPESLLQKEKDHIEGFAPEVAWVTHGGAEPLQER-FCIRPTSET 118

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN 402
               V++  ++SYR+LP    ++ SV R E   +    +R R F   + H        + 
Sbjct: 119 LFCDVWSKTVQSYRDLPKVWNQWCSVLRWEK--TTRPFLRSREFLWQEGHTIHAT---YE 173

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
           E  +   L+  +YKDF                                V + +       
Sbjct: 174 EAEERTKLMWKVYKDF--------------------------------VEENLAIPVVAG 201

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFN-LPSRFNAFYVNSHSEKCHPV 521
             T      GA      E ++ D  G+  Q  T     N  P  F+  Y + ++E     
Sbjct: 202 RKTESEKFAGAQDTYTIEALMHD--GQALQSATSHFFGNSFPDAFDIKYADKNNELHS-- 257

Query: 522 MIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIANL 574
            ++   +G   R IG +I    ++    LP  ++P+Q  V  I       ++ A E+ + 
Sbjct: 258 -VYETSWGLSTRIIGAIIMVHGDDSGLVLPPRIAPVQTRVIPIAQHKEGVLDKANELLDA 316

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           L       + D   ++  +K  E  +  IP  I  G K+     + + R  +     V++
Sbjct: 317 LNKAGYRAKIDDSEKSPGWKFSEQEMLGIPTRIEIGPKDIENGQVVVVRRDTREKIVVAI 376

Query: 635 LDAIPILTK--ESLPPDC 650
            +    L +  E++  D 
Sbjct: 377 DEITTKLGEILETIQADL 394


>gi|229154159|ref|ZP_04282283.1| Prolyl-tRNA synthetase 2 [Bacillus cereus ATCC 4342]
 gi|228629295|gb|EEK85998.1| Prolyl-tRNA synthetase 2 [Bacillus cereus ATCC 4342]
          Length = 502

 Score =  185 bits (469), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 85/445 (19%), Positives = 174/445 (39%), Gaps = 60/445 (13%)

Query: 214 RPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGW 273
           R  L  + G      +E  Q +  +EE   + +  + ++ +L   +    G +     G+
Sbjct: 14  RAFLYFLEGGRLTMAKEQVQAITKMEEDFAQWYTDIVKKAELVDYSSVK-GCMILRPYGY 72

Query: 274 KIFQTLISYMRRKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDL 331
            +++ +   M  K+K   +E +  P  + + L  ++  H + +   +  V    D     
Sbjct: 73  ALWENMQKVMDEKLKATGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGDEKLAE 132

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
           R   ++P +       F+  ++SY +LP    ++ SV R E   +    +R   F   + 
Sbjct: 133 R-LCIRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEK--TTRPFLRTTEFLWQEG 189

Query: 392 H-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKG 450
           H +  T E+   E L I NL  S  +D+    ++    T  EK  G+ A +         
Sbjct: 190 HTIHETAEESQAETLNILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKATY--------- 240

Query: 451 VLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAF 509
                                        E ++ D  G+  Q GT      N    F+  
Sbjct: 241 ---------------------------TIESLMHD--GKALQTGTSHNFGTNFSEAFDIK 271

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TS 562
           +++ + +  +   +H+  +G   R IG +I    +N    +P  ++P+Q ++  I     
Sbjct: 272 FLDRNGKWQY---VHQTSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQVVIVPIAQHKE 328

Query: 563 SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
             +  A E+   ++     ++ D  N+T  +K  E+ +K IPI +  G K+  +  + + 
Sbjct: 329 GVLAKATELQGHIQKV-ARVKIDASNKTPGWKFNEYEMKGIPIRLEVGPKDIEKNQVVLV 387

Query: 623 RFGSTTTQKVS---LLDAIPILTKE 644
           R  +   + ++   L + IP L +E
Sbjct: 388 RRDTKEKEFIAMDQLEERIPALLEE 412


>gi|51978320|gb|AAU19870.1| proline--tRNA ligase (prolyl-tRNA synthetase) [Bacillus cereus
           E33L]
          Length = 502

 Score =  185 bits (469), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 86/446 (19%), Positives = 173/446 (38%), Gaps = 60/446 (13%)

Query: 213 NRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKG 272
            R  L  + G      +E  Q +  +EE   + +  + ++ +L   +    G +     G
Sbjct: 13  TRAFLYFLEGGRLTMAKEQVQAITKMEEDFAQWYTDIVKKAELVDYSSVK-GCMILRPYG 71

Query: 273 WKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKD 330
           + +++ +   M  K+K   +E +  P  + + L  ++  H + +   +  V    D    
Sbjct: 72  YALWENMQKVMDEKLKATGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGDEKLA 131

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
            R   ++P +       F+  ++SY +LP    ++ SV R E   +    +R   F   +
Sbjct: 132 ER-LCIRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEK--TTRPFLRTTEFLWQE 188

Query: 391 AH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMK 449
            H +  T E+   E L I NL  S  +D+    ++    T  EK  G+ A +        
Sbjct: 189 GHTIHETAEESQAETLNILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKATY-------- 240

Query: 450 GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNA 508
                                         E ++ D  G+  Q GT      N    F+ 
Sbjct: 241 ----------------------------TIESLMHD--GKALQTGTSHNFGTNFSEAFDI 270

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---T 561
            +++   +  +   +H+  +G   R IG +I    +N    +P  ++P+Q ++  I    
Sbjct: 271 KFLDRTGKWQY---VHQTSWGVSTRMIGGLIMVHGDNNGLVMPPKVAPVQVVIVPIAQHK 327

Query: 562 SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
              +  A E+   ++     ++ D  N+T  +K  E+ +K IPI +  G K+  +  + +
Sbjct: 328 EGVLAKAIELQGHIQKV-ARVKIDASNKTPGWKFNEYEMKGIPIRLEVGPKDIEKNQVVL 386

Query: 622 RRFGSTTTQKVS---LLDAIPILTKE 644
            R  +   + +S   L + IP L +E
Sbjct: 387 VRRDTKEKEFISMDQLEERIPALLEE 412


>gi|315122709|ref|YP_004063198.1| prolyl-tRNA synthetase [Candidatus Liberibacter solanacearum
           CLso-ZC1]
 gi|313496111|gb|ADR52710.1| prolyl-tRNA synthetase [Candidatus Liberibacter solanacearum
           CLso-ZC1]
          Length = 453

 Score =  184 bits (468), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 81/448 (18%), Positives = 155/448 (34%), Gaps = 52/448 (11%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  L       +++E   H+ + R      I++   G+  W   G K    + + +R +
Sbjct: 4   SKYFLPAMQENPKDAEIISHKMMLRTGM---ISQHSKGMYSWLPLGNKALSKVNAIIREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
                  E++ P +    LW +SG ++SY   M  +   +D     ++    P N     
Sbjct: 61  QDRIGALEMSNPTLQSADLWIESGRYESYGKEMLRIVDRND-----KSMLYGPTNEEMMT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNEC 404
            +F   +KSYR+LP+ L +    +R+E      G MR R F   DA+ F  T E   +  
Sbjct: 116 DIFRSHVKSYRDLPLILYQMQLKFRDELRPRF-GTMRSREFLMKDAYSFDLTFEDSVHSY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            K+    + I+   G + I ++  + P     S         ++    +T    S+D +N
Sbjct: 175 NKMFVSYLRIFHRLGLKSIPMRAESGPIGGSLSHEF-----IVLSNTGETQLFCSKDFMN 229

Query: 465 TGVLLGEGAF----------------YGPKFEYILKDAIG----------RDWQCGTI-Q 497
             +      F                Y    +   +              R  + G I  
Sbjct: 230 FPIPSENTDFDDIVSLKDIVRQWTTPYAATSDVHNEKLFHSLSEEDRIVARGIEVGHIFH 289

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPI 553
                    +A +  +  +K +  M    +     R +  +IE+         P  +SP 
Sbjct: 290 FGTKYSHPMSATFQGADGKKHYVQMGSYGI--GPMRVVAAIIESSHDAQGIIWPDSVSPF 347

Query: 554 QAIVTTITSSAVEYA---QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
              +  +            +I   L      +  D  +E    K     +   P+ II G
Sbjct: 348 HISLINLKIHDQACCSASDKIYTQLSQAGCDVFLDDVDEQAGSKFALADLLGFPLQIIIG 407

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAI 638
            K  S+  + I+   + T + +SL + +
Sbjct: 408 SKFISDSKVEIKNRSTGTKEYMSLEEVV 435


>gi|228906179|ref|ZP_04070068.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis IBL 200]
 gi|228853588|gb|EEM98356.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis IBL 200]
          Length = 502

 Score =  184 bits (468), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 85/445 (19%), Positives = 173/445 (38%), Gaps = 60/445 (13%)

Query: 214 RPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGW 273
           R  L  + G      +E  Q +  +EE   + +  + ++ +L   +    G +     G+
Sbjct: 14  RAFLYFLEGGRMTMAKEQVQAITKMEEDFAQWYTDIVKKAELVDYSSVK-GCMILRPYGY 72

Query: 274 KIFQTLISYMRRKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDL 331
            +++ +   M  K+K+  +E +  P  + + L  ++  H + +   +  V    D     
Sbjct: 73  ALWENMQKVMDEKLKETGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGDEKLAE 132

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
           R   ++P +       F+  ++SY +LP    ++ SV R E   +    +R   F   + 
Sbjct: 133 R-LCVRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEK--TTRPFLRTTEFLWQEG 189

Query: 392 H-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKG 450
           H +  T E+   E L I NL  S  +D+    ++    T  EK  G+ A +         
Sbjct: 190 HTIHETAEESQAETLNILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKATY--------- 240

Query: 451 VLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAF 509
                                        E ++ D  G+  Q GT      N    F+  
Sbjct: 241 ---------------------------TIESLMHD--GKALQTGTSHNFGTNFSEAFDIK 271

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TS 562
           +++ + +  +   +H+  +G   R IG +I    +N    +P  ++P+Q ++  I     
Sbjct: 272 FLDRNGKWQY---VHQTSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQVVIVPIAQHKE 328

Query: 563 SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
             +  A E+   ++     ++ D  N+T  +K  E+ +K IPI +  G K+  +  + + 
Sbjct: 329 GVLAKATELQGHIQKV-ARVKIDASNKTPGWKFNEYEMKGIPIRLEVGPKDIEKNQVVLV 387

Query: 623 RFGSTTTQKVS---LLDAIPILTKE 644
           R      + V    L + +P L +E
Sbjct: 388 RRDRKEKEFVPMDQLEERVPALLEE 412


>gi|330834227|ref|YP_004408955.1| prolyl-tRNA synthetase [Metallosphaera cuprina Ar-4]
 gi|329566366|gb|AEB94471.1| prolyl-tRNA synthetase [Metallosphaera cuprina Ar-4]
          Length = 480

 Score =  184 bits (468), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 83/442 (18%), Positives = 169/442 (38%), Gaps = 64/442 (14%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           +         +       +  E +++        G   W   G+KI   +IS +R+ + +
Sbjct: 1   MKISRDKWSSNFSEWFDWVISEAEIYDYGRYPIKGAGVWMPYGFKIRHNVISLIRKLLDE 60

Query: 290 -DYEEINTPQVLDQHL-WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
             +EEI  P ++ + L  ++S H   +   +F V    +   + R FAL+P +      +
Sbjct: 61  TGHEEILFPLLIPEELLKKESEHIRGFEKEVFWVTQGGEEKLETR-FALRPTSEVAITLM 119

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD-DAH-VFCTKEQMFNECL 405
            +  ++ Y +LP +  +  SV+R E   +   L+RVR  T   +AH +  T E    +  
Sbjct: 120 ESLWIRGYSQLPRKFYQIVSVFRYETK-ATRPLIRVRELTTFKEAHTIHETYEDAAKQVK 178

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
           +   +    +   G   ++ K              WD                       
Sbjct: 179 EAVEIYSKFFDILGIPYLISKRPD-----------WDKF--------------------- 206

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN-SHSEKCHPVMIH 524
                 GA Y    + ++ D  GR  Q GT        ++   + +  +     +P   H
Sbjct: 207 -----AGAEYTIALDTLMPD--GRALQIGTAHHLGQHFTKAMDYKIQRADGTLTYP---H 256

Query: 525 RAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI-------TSSAVEYAQEIAN 573
           +  +G  +R I  +I    ++    L   ++PI+A++  I       T     YA+E+ +
Sbjct: 257 QTSYGISDRVIATVISINGDDHGPVLSPVIAPIEAVIIPIPGKSEEDTKKVFSYAEEVRS 316

Query: 574 LLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
            L S+ +    D   ++T   K     +K +PI +  G +E +  S+ ++R  +   + V
Sbjct: 317 TLASNGIRAVMDSSEDKTPGEKFYIWELKGVPIRVETGVREMNSGSVYLKRRDTLEGKVV 376

Query: 633 SLLDAIPILT--KESLPPDCQK 652
              D +  L   ++++  D ++
Sbjct: 377 KREDLVKELKNMEKTIEEDMRR 398


>gi|88602429|ref|YP_502607.1| prolyl-tRNA synthetase [Methanospirillum hungatei JF-1]
 gi|114152211|sp|Q2FLY5|SYP_METHJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|88187891|gb|ABD40888.1| prolyl-tRNA synthetase [Methanospirillum hungatei JF-1]
          Length = 478

 Score =  184 bits (468), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 67/416 (16%), Positives = 154/416 (37%), Gaps = 60/416 (14%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQ-H 303
            +  +    ++  +     G+  W   G+ I + +   +R  +  D+EE   P ++ +  
Sbjct: 17  WYNDILWRAEIMDVRYPVKGLYVWFPFGFGIRKRVYGILRELLDRDHEETLFPLLIPEPE 76

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
             +++ H   +   ++ V     T  D++  AL+P +      ++   ++S+ +LP+++ 
Sbjct: 77  FMKEAEHIKGFENEVYWVTHGGTTPLDIK-LALRPTSETAIYPMYALWVRSHADLPIKVY 135

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFT-QDDAHVFC-TKEQMFNECLKIHNLIISIYKDFGFE 421
           +  + +R E       L+R+R  T   +AH    T E    +           Y      
Sbjct: 136 QIVNTFRYETK-HTRPLIRLREITSFKEAHTVHATWEDAERQVEDAIARYREFYDRLNIP 194

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            ++ K              WD                             GA Y    + 
Sbjct: 195 VLISKRPD-----------WDKF--------------------------PGADYTIAVDT 217

Query: 482 ILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI- 539
           I+ D  GR  Q GT+  +  +    F+  Y ++  ++ +    H+  +G  ER I  +I 
Sbjct: 218 IMPD--GRTLQIGTVHHLGDHFSKTFSIQYEDTKGQQQY---CHQTCYGISERSIAALIS 272

Query: 540 ---ENFKGNLPLWLSPIQAIVTTIT-----SSAVEYAQEIANLLKSHHLSIETDFRNETI 591
              ++    LP  ++P+Q ++  +         ++ A+ +   L++    ++ D R+   
Sbjct: 273 MHGDDRGLMLPPEVAPVQIVIVPVIMKKREEEIMQAAELLEKELQNAGYRVKIDTRDLRP 332

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSI-GIRRFGSTTTQKVSLLDAIPILTKESL 646
             K     ++ +P+ +  G ++     + G+ R G      +   D I  + ++  
Sbjct: 333 GAKYYYWEMRGVPLRLEIGPRDLDNGVVMGVLRSGGKE--SLPRADIIAEVNRKMT 386


>gi|229194773|ref|ZP_04321562.1| Prolyl-tRNA synthetase 2 [Bacillus cereus m1293]
 gi|228588716|gb|EEK46745.1| Prolyl-tRNA synthetase 2 [Bacillus cereus m1293]
          Length = 502

 Score =  184 bits (468), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 85/448 (18%), Positives = 171/448 (38%), Gaps = 64/448 (14%)

Query: 213 NRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKG 272
            R  L  + G      +E  Q +  +EE   + +  + ++ +L   +    G +     G
Sbjct: 13  TRAFLYFLEGGRLTMAKEQVQAITKMEEDFAQWYTDIVKKAELVDYSSVK-GCMILRPYG 71

Query: 273 WKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKD 330
           + +++ +   M  K+K   +E +  P  + + L  ++  H + +   +  V    +    
Sbjct: 72  YALWENMQKVMDEKLKATGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGNEKLA 131

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
            R   ++P +       F+  ++SY +LP    ++ SV R E   +    +R   F   +
Sbjct: 132 ER-LCIRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEK--TTRPFLRTTEFLWQE 188

Query: 391 AH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMK 449
            H +  T E+   E L I NL  S  +D+    ++    T  EK  G+ A +        
Sbjct: 189 GHTIHETAEESQAETLNILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKATY-------- 240

Query: 450 GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNA 508
                                         E ++ D  G+  Q GT      N    F+ 
Sbjct: 241 ----------------------------TIESLMHD--GKALQTGTSHNFGTNFSEAFDI 270

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSA 564
            +++   +  +   +H+  +G   R IG +I    +N    +P  ++P+Q ++  I    
Sbjct: 271 KFLDRTGKWQY---VHQTSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQVVIVPIAQHK 327

Query: 565 VEYAQEIANLLKSHHL-----SIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSI 619
                 +A  L+          ++ D  N+T  +K  E+ +K IPI +  G K+  +  +
Sbjct: 328 EGV---LAKALELQGHIQKVARVKIDASNKTPGWKFNEYEMKGIPIRLEVGPKDIEKNQV 384

Query: 620 GIRRFGSTTTQKVS---LLDAIPILTKE 644
            + R  +   + +S   L + IP L +E
Sbjct: 385 VLVRRDTKEKEFISMDQLEERIPALLEE 412


>gi|210616985|ref|ZP_03291320.1| hypothetical protein CLONEX_03542 [Clostridium nexile DSM 1787]
 gi|210149508|gb|EEA80517.1| hypothetical protein CLONEX_03542 [Clostridium nexile DSM 1787]
          Length = 480

 Score =  184 bits (468), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 78/439 (17%), Positives = 162/439 (36%), Gaps = 58/439 (13%)

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR 284
              +++L + +   +E   + +  + RE +L   +    G + +   G+ I++ +   + 
Sbjct: 1   MANEKKLVKAITARDEDFAQWYTDVVREAELCDYSSVK-GCLNYLPNGYAIWENIQRDLD 59

Query: 285 RKIKDDYEE-INTPQVLDQHLWQQSG-HWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
            + K+   E ++ P ++ + L ++ G H + +   +  V          R   ++P +  
Sbjct: 60  ARFKETGVENVSLPMLIPESLLEKEGDHIEGFAPEVAWVTHGGMERLQER-LCIRPTSET 118

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMF 401
               +++  ++S+R+LP    ++ SV R E   +    +R R F   + H    T E+  
Sbjct: 119 LFCDLWSKMVRSHRDLPKVWNQWNSVLRWEK--TTRPFLRSREFLWQEGHTIHATYEEAE 176

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
              L +  +     +D      +       EK  G                         
Sbjct: 177 QRTLTMLKVYQDFIRDSLAIPFVSGRKAENEKFAG------------------------- 211

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFN-LPSRFNAFYVNSHSEKCHP 520
                      A      E ++ D  G+  Q  T     N  P  FN  Y++ +++    
Sbjct: 212 -----------AQDTYTVEALMHD--GKALQSATSHFFGNGFPDAFNIKYIDKNNQPHS- 257

Query: 521 VMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIAN 573
             ++   +G   R IG +I    ++    LP  ++P+Q  V  I       +E A E+  
Sbjct: 258 --VYETSWGLSTRIIGAIIMVHGDDDGLVLPPRIAPVQTRVIPIAQHKEGVLEKADELLA 315

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            LK+     + D   ++  +K  E  I  IP  I  G K+  +  + + R  +     VS
Sbjct: 316 ALKAAGYRAKIDDSEKSPGWKFSEQEILGIPTRIEIGPKDIEKNQVVVVRRDTREKIVVS 375

Query: 634 LLDAIPILTK--ESLPPDC 650
           + +    L +  E++  D 
Sbjct: 376 IDEITTKLGEILETIQKDM 394


>gi|254167402|ref|ZP_04874254.1| prolyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|197623665|gb|EDY36228.1| prolyl-tRNA synthetase [Aciduliprofundum boonei T469]
          Length = 465

 Score =  184 bits (468), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 74/422 (17%), Positives = 163/422 (38%), Gaps = 58/422 (13%)

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEE 293
           + F +E+    + ++     L        G+  W   GW++ + +  Y R+   +  ++E
Sbjct: 1   MEFPKENFSEWYNEVIEAAGLVDKRYPVKGMHVWLPYGWQLMRNIDEYFRKVFTEHKHQE 60

Query: 294 INTPQVLDQ-HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           +  P ++ +    +++ H + +   ++ V        D++   ++P +      +F+  +
Sbjct: 61  VYFPLLIPETEFKKEAEHIEGFENEVYWVTHGGLDPLDVK-LVVRPTSETAMYPMFSLWI 119

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLI 411
           +S+ +LP+R+ +  +V+R E        +RVR     ++H    T E+   +        
Sbjct: 120 RSHADLPLRIFQIVNVFRYETK-QTRTFIRVREVHFFESHTAHATAEESEEQIK------ 172

Query: 412 ISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
                                    +  +W    + +      ++ +  D+         
Sbjct: 173 ------------------------DNIEIWKKVADKLALPYVLVRKTDWDKFP------- 201

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           GA Y    E I+    GR  Q  TI Q   N    +   Y+       +   +H+  FG 
Sbjct: 202 GAAYSIGAETIMP--SGRTLQIATIHQYFQNFSKPYGIEYLKEDGTHDY---VHQTTFGM 256

Query: 531 IERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVE----YAQEIANLLKSHHLSI 582
            ER +G ++    +N    LP  ++PIQ ++  I +   E     A++I N LK     +
Sbjct: 257 SERLVGAIVGIHGDNRGLILPPEIAPIQVVIVPIVNKNKEGILQEARKIENELKEL-YRV 315

Query: 583 ETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
             D R+  T  YK  +  +K +P+ +  G ++  +  + + R  +     VS  + +  +
Sbjct: 316 HLDDRDNYTPGYKFYDWELKGVPLRLEIGPRDLEKGQVVLVRRDNFEKIFVSRKEYVDRI 375

Query: 642 TK 643
            +
Sbjct: 376 GE 377


>gi|226324133|ref|ZP_03799651.1| hypothetical protein COPCOM_01911 [Coprococcus comes ATCC 27758]
 gi|225207682|gb|EEG90036.1| hypothetical protein COPCOM_01911 [Coprococcus comes ATCC 27758]
          Length = 481

 Score =  184 bits (467), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 78/439 (17%), Positives = 162/439 (36%), Gaps = 58/439 (13%)

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR 284
              +++  Q +   +E   + +  + RE  L   +    G + +   G+ I++ + + + 
Sbjct: 1   MAKEKKFVQAITSRDEDFAQWYTDVVREAKLCDYSSVK-GCLNYLPNGYAIWEKIQADLD 59

Query: 285 RKIKDDYEE-INTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
           ++ K+   E +  P ++ ++L  ++S H + +   +  V              ++P +  
Sbjct: 60  KRFKETGVENVYLPMLIPENLLQKESDHIEGFAPEVAWVTKGGLETLQ-EPMCIRPTSET 118

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMF 401
               ++   ++SYR+LP    ++ SV R E   +    +R R F   + H    T E+  
Sbjct: 119 LFCDLWARTVQSYRDLPKVWNQWCSVLRWEK--TTRPFLRSREFLWQEGHTIHATYEEAE 176

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
              L +  +   + +                                    D++      
Sbjct: 177 QRTLTMLRVYQELIR------------------------------------DSLAIPFVS 200

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFN-LPSRFNAFYVNSHSEKCHP 520
              T      GA      E ++ D  G+  Q  T     N  P  F+  Y++ ++E    
Sbjct: 201 GPKTESEKFAGAQDTYTVEALMHD--GKALQSATSHFFGNAFPDAFDIKYLDKNNELHS- 257

Query: 521 VMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIAN 573
             ++   +G   R IG +I    ++    LP  ++P+Q  V  I       +E A E+  
Sbjct: 258 --VYETSWGLSTRIIGALIMVHGDDSGLVLPPRIAPVQTRVIPIAQHKEGVLEKANELTE 315

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            LK    S++ D   ++  +K  E  +  IP  I  G K+  +  + + R  +     VS
Sbjct: 316 RLKKAGYSVKIDDSEKSPGWKFSEQEMLGIPTRIEIGPKDIEQNQVVVVRRDTREKIVVS 375

Query: 634 LLDAIPILTK--ESLPPDC 650
           L +    L +  E++  D 
Sbjct: 376 LDEIETKLGEILETIQKDM 394


>gi|126728909|ref|ZP_01744724.1| prolyl-tRNA synthetase [Sagittula stellata E-37]
 gi|126710839|gb|EBA09890.1| prolyl-tRNA synthetase [Sagittula stellata E-37]
          Length = 445

 Score =  184 bits (466), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 74/434 (17%), Positives = 146/434 (33%), Gaps = 38/434 (8%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
            E++   HR + R   +        G+  W   G+K+ + + + +  + +   +  +  P
Sbjct: 16  SEAQIVSHRLMLRAGMIKQAQA---GIYSWLPLGYKVLKKIENIVHEEQQRAGHIPLLMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW++SG +++Y   M  +     T +  R     P N      +F   ++SY++
Sbjct: 73  TLQSADLWRESGRYEAYGEEMLRI-----TDRHGRDMLYGPTNEELITDIFRSYVRSYKD 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYK 416
           LP+ L      +R+E      G+MR R F   D + F  TKE   +   +     +  Y+
Sbjct: 128 LPLTLYHIQWKFRDEVRPRF-GVMRGREFLMKDGYNFDLTKEDALHAYNRHLVSYLRTYE 186

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIK----NSSQDRINTG------ 466
             G + I ++    P     +      AE     V    +          I+        
Sbjct: 187 RMGLQAIPMRADGGPIGGDYTHEFLVLAETGESEVFYDSEITDLKFGTRDIDYDSVEECQ 246

Query: 467 -VLLGEGAFYGPKFEYILKDAIG-----RDWQCGTI---QVDFNLPSRFNAFYVNSHSEK 517
            VL    + Y    E   +   G     R      I   Q+ +      +A         
Sbjct: 247 SVLEEFTSRYARTDETHDEALFGEIPEERRRTARGIEVGQIFYFGTKYSDAMNAVVQDHS 306

Query: 518 CHPVMIHRAVFGS-IERFIGIMIE-NFKGNLPLWL---SPIQAIVTTITSS---AVEYAQ 569
              V +H    G  + R +G +IE +      +W    +P    +  +      A    +
Sbjct: 307 GAQVPVHMGSHGIGVSRLLGAIIEASHDDKGIIWPEGVTPFHCGIINLKQGDAEADAACE 366

Query: 570 EIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
            I   L    L    D  +E    K     +  +P  I  G +      + +    +  +
Sbjct: 367 AIYLDLVKSGLEPLYDDTDERAGGKFATMDLIGLPWRITVGPRGLKNGVVELTSRRTGES 426

Query: 630 QKVSLLDAIPILTK 643
           +++    A+  + +
Sbjct: 427 EEMPPEQAVERIRQ 440


>gi|189182913|ref|YP_001936698.1| prolyl-tRNA synthetase [Orientia tsutsugamushi str. Ikeda]
 gi|189179684|dbj|BAG39464.1| prolyl-tRNA synthetase [Orientia tsutsugamushi str. Ikeda]
          Length = 433

 Score =  184 bits (466), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 81/421 (19%), Positives = 142/421 (33%), Gaps = 29/421 (6%)

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVL 300
           E   H+ + R   +        G+  W   G K+ Q +   +R+ +      E+  P + 
Sbjct: 19  EIISHKLMLRAGMIKQACA---GIYNWLPLGIKVLQNIQDIVRKNMNAAQCIELLMPCIQ 75

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
              LW++S  +++Y   M  +K   D           P N      +F   ++SY++LP 
Sbjct: 76  PASLWKESSRYNAYGKEMLKIKDRHDN-----DLLFGPTNEELITDIFRSSIQSYKDLPK 130

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDFG 419
                   +R+E      G+MR R F   DA+ F   +    +    ++   + I+KD G
Sbjct: 131 NFYHIQWKFRDEIRPRF-GVMRSREFIMKDAYSFDIDQASAIQSYNLMYLTYLKIFKDLG 189

Query: 420 FEKIMVKLSTRPEKRVGSDALWDD-AENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
            + I V+          S       A    K   D+ K +  D      L      Y   
Sbjct: 190 LKVIPVQADNGAIGGKLSHEFHIITATGDSKIYYDSTKFNPFDYNQDLSLNKLEQLYIVT 249

Query: 479 FEYILKDAIGRD---------WQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG 529
            +    D               + G I       S      +   + K   V +     G
Sbjct: 250 EDKHKTDQNQISNDTISTISGIEVGHIFYFGTKYSELMKACIQLQNGKLTAVEMGSYGIG 309

Query: 530 SIERFIGIMIENFKGNLPL-WL---SPIQAIVT---TITSSAVEYAQEIANLLKSHHLSI 582
            I R IG +IE       + W    +P +  V           + + ++  +L       
Sbjct: 310 -ISRLIGAIIEANHDEYGIIWPQNVAPFKVSVINLLPNNDKCKQTSNQLYQILTQQKTDA 368

Query: 583 ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             D  + +  +K+  H +  IP  II G       +I  +   +   QK+S+   I  LT
Sbjct: 369 LLDDTSSSAGHKLAAHDLIGIPYQIIIGKNFIETATIEFKYRHNQQLQKLSIDALINQLT 428

Query: 643 K 643
           +
Sbjct: 429 E 429


>gi|70607289|ref|YP_256159.1| prolyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
 gi|114152265|sp|Q4J8L4|SYP_SULAC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|68567937|gb|AAY80866.1| bifunctional aminoacyl-tRNA synthetase [Sulfolobus acidocaldarius
           DSM 639]
          Length = 483

 Score =  184 bits (466), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 89/442 (20%), Positives = 178/442 (40%), Gaps = 64/442 (14%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           +       E +       + RE +++        G+  W   G+KI Q  +  +R+ +  
Sbjct: 1   MKLTREKWENNFSEWFDWVIREAEIYDYGRYPVKGMGVWLPYGFKIRQAAVDLIRKLLDA 60

Query: 290 -DYEEINTPQVLDQHLWQQSG-HWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
             +EE+  P ++ + L ++ G H   + + +F V    +   D+R  AL+P +      +
Sbjct: 61  KGHEEVLFPLLVPEDLLRREGEHIKGFESEVFWVTKGGEENLDIR-LALRPTSETAITYM 119

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF-TQDDAHV-FCTKEQMFNECL 405
             + ++SY++LP +  +  SV+R E   +   ++R+R   T  +AH    T E    +  
Sbjct: 120 ETYWVQSYKQLPKKYYQIVSVFRYETK-ATRPMIRLREVSTFKEAHTLHETYEDAERQVK 178

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
           +   +  + +++ G   IM +              WD                       
Sbjct: 179 EAIEIYKNFFEELGIPYIMSQRPE-----------WDKF--------------------- 206

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIH 524
                 GA Y   F+ I+ D+  R  Q GT+  +  +    F+           +P   H
Sbjct: 207 -----AGAIYTIAFDTIMPDS--RVLQIGTVHHLGQHFTKAFDLKVQRKDGTLDYP---H 256

Query: 525 RAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI-------TSSAVEYAQEIAN 573
           +  +G  +R I + +    ++    L   L+PI+A++  I       T   +EY++++A 
Sbjct: 257 QTSYGISDRVIAVAVSINGDDHGTILSPVLAPIKAVIIPIPAKDEKETEKIIEYSEDVAK 316

Query: 574 LLKSHHLSIETD-FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
           +L S+ ++   D    +T   K     IK +P+ I  G +E S  S+ I+R  +     V
Sbjct: 317 ILVSNGINTVIDKDTEKTPGEKYYIWEIKGVPLRIEIGPRELSSNSVFIKRRDTLQGISV 376

Query: 633 SLLDAIPILTK--ESLPPDCQK 652
              + +  + K  E+L  D ++
Sbjct: 377 KKENLVSEVVKLLETLRKDLKE 398


>gi|75761526|ref|ZP_00741486.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
 gi|74490981|gb|EAO54237.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
          Length = 503

 Score =  184 bits (466), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 84/438 (19%), Positives = 172/438 (39%), Gaps = 60/438 (13%)

Query: 221 YGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLI 280
            G      +E  Q +  +EE   + +  + ++ +L   +    G +     G+ +++ + 
Sbjct: 22  EGGRLTMAKEQVQAITKMEEDFAQWYTDIVKKAELVDYSSVK-GCMILRPYGYALWENMQ 80

Query: 281 SYMRRKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKP 338
             M  K+K+  +E +  P  + + L  ++  H + +   +  V    D     R   ++P
Sbjct: 81  KVMDEKLKETGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGDEKLAER-LCVRP 139

Query: 339 MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH-VFCTK 397
            +       F+  ++SY +LP    ++ SV R E   +    +R   F   + H +  T 
Sbjct: 140 TSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEK--TTRPFLRTTEFLWQEGHTIHETA 197

Query: 398 EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKN 457
           E+   E L I NL  S  +D+    ++    T  EK  G+ A +                
Sbjct: 198 EESQAETLNILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKATY---------------- 241

Query: 458 SSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSE 516
                                 E ++ D  G+  Q GT      N    F+  +++ + +
Sbjct: 242 --------------------TIESLMHD--GKALQTGTSHNFGTNFSEAFDIKFLDRNGK 279

Query: 517 KCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQ 569
             +   +H+  +G   R IG +I    +N    +P  ++P+Q ++  I       +  A 
Sbjct: 280 WQY---VHQTSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLAKAT 336

Query: 570 EIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           E+   ++     ++ D  N+T  +K  E+ +K IPI +  G K+  +  + + R  +   
Sbjct: 337 ELQGHIQKV-ARVKIDASNKTPGWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEK 395

Query: 630 QKVS---LLDAIPILTKE 644
           + +S   L + IP L +E
Sbjct: 396 EFISMDQLEERIPALLEE 413


>gi|148979936|ref|ZP_01815794.1| threonyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
 gi|145961540|gb|EDK26842.1| threonyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
          Length = 156

 Score =  184 bits (466), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 61/153 (39%), Positives = 98/153 (64%), Gaps = 2/153 (1%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  DVA SI   LAK  +A  ++G+  D  D +  + S+EIIT +
Sbjct: 4   ITLPDGSQRQFDNPVSTLDVALSIGPGLAKATIAGRVDGERVDACDLIENDASLEIITAK 63

Query: 66  DP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  AV+ ++PE ++AIGP I++GFYYD D E   + ++L +IEK
Sbjct: 64  DEVDGLEIVRHSCAHLLGHAVKQLFPEAKMAIGPTIDNGFYYDIDLEHSLTQEDLEKIEK 123

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAY 157
           +M+E+       +K+ +S ++AR+ FE++ E Y
Sbjct: 124 RMKELAKTKYQVVKKKVSWQEARDAFEARGETY 156


>gi|332796853|ref|YP_004458353.1| prolyl-tRNA synthetase [Acidianus hospitalis W1]
 gi|332694588|gb|AEE94055.1| prolyl-tRNA synthetase [Acidianus hospitalis W1]
          Length = 481

 Score =  184 bits (466), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 82/438 (18%), Positives = 172/438 (39%), Gaps = 64/438 (14%)

Query: 235 LYFLEESEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYE 292
               + +       +  + +++        G+  W   G+KI Q +I+ +R+ + +  +E
Sbjct: 5   REKWKNNFSEWFDNVIFQAEIYDYGRYPIKGMGVWMPYGFKIRQNVINIIRKFLDETGHE 64

Query: 293 EINTPQVLDQH-LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           E+  P ++ ++ L ++S H   +   ++ V    +   D+R  AL+P +      + +  
Sbjct: 65  EVLFPLLIPEYLLRKESEHIKGFEGEVYWVTKGGEEDLDIR-LALRPTSEVAITYMESLW 123

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD-DAHV-FCTKEQMFNECLKIHN 409
           +KSY+ELP +  +  S++R E   +   ++R+R  T   +AH    + E    +  +   
Sbjct: 124 IKSYKELPKKYYQIVSIFRYETK-ATRPMIRLREVTTFKEAHTLHVSYEDAERQVKEAIE 182

Query: 410 LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL 469
           +   I+   G   I+ +              WD                           
Sbjct: 183 IYKKIFDTLGIPYILSERPE-----------WDRF------------------------- 206

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
             GA +   F+ ++ D  GR  Q GT+  +  +     +     +     +P   ++  +
Sbjct: 207 -AGAEHTYAFDTLMPD--GRALQIGTVHHLGQHFTKALDYKIQKADGSLDYP---YQTSY 260

Query: 529 GSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVE-------YAQEIANLLKS 577
           G  +R I + I    ++    L   ++PI+ ++  I +   E       Y +EI   L S
Sbjct: 261 GISDRVIAVSIAVNGDDHGPILNPIIAPIKVVIIPIPAKTEEDNKRVENYCKEIQEKLSS 320

Query: 578 HHLSIETD-FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
             +S   D  + +T   K     +K +P+ I  G +E +  +I I+R  +  ++ V   +
Sbjct: 321 AGISAVVDSDKEKTPGEKFYYWEMKGVPLRIEIGLREVNNETITIKRRDTLESKIVKKDE 380

Query: 637 AIPILTK--ESLPPDCQK 652
            I  +     SL  D +K
Sbjct: 381 LIKTVNDLLSSLSEDLKK 398


>gi|222475082|ref|YP_002563497.1| prolyl-tRNA synthetase (proS) [Anaplasma marginale str. Florida]
 gi|254994925|ref|ZP_05277115.1| prolyl-tRNA synthetase [Anaplasma marginale str. Mississippi]
 gi|255003060|ref|ZP_05278024.1| prolyl-tRNA synthetase [Anaplasma marginale str. Puerto Rico]
 gi|222419218|gb|ACM49241.1| prolyl-tRNA synthetase (proS) [Anaplasma marginale str. Florida]
          Length = 425

 Score =  184 bits (466), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 74/403 (18%), Positives = 145/403 (35%), Gaps = 28/403 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRA 316
           + ++ SG+  W   G K+ +T+   +R ++    + EI  P V    LW++S  +DSY  
Sbjct: 32  VRQNASGLYTWLPLGLKVLRTIEHIVREEMDSSGFLEILMPSVQPADLWRESLRYDSYGP 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  ++      +  R     P +      V    LKSYR+LP+ L +    +R+E    
Sbjct: 92  EMLRMQD-----RSGREMVFGPTHEEAISDVVRSSLKSYRDLPINLYQIQWKFRDELRPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
            HG+MR R F   DA+ F    E        + +    I++  G   I  K  +      
Sbjct: 147 -HGIMRGREFLMKDAYSFDVDFEGAMRSYENVFSAYFRIFRRLGLVPIAAKADSGAIGGS 205

Query: 436 GSDALW------DDAENIMKGVLDTIKNSS--QDRINTGVLLGEGAFYGPKFEYILKD-A 486
            S          +      K  LD  KN     + I +     E A           D  
Sbjct: 206 ISHEFHVLVPTGESTVYHDKKALDLSKNDYCTTEEIASVYAATEDAHDPQNCGVDPNDLQ 265

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE----NF 542
           + +  +   +    +  S       +  +      ++     G I R +  +IE    + 
Sbjct: 266 VSKGIEVAHVFYLGDRYSAPMNVKFHDKNGNSAHALMGCYGIG-ISRLVAAIIEVFHDDV 324

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEY---AQEIANLLKSHHLSIETDFRNETINYKIREHS 599
               P  ++P +  +  + ++  +    A+ I   L         D   ++   K+    
Sbjct: 325 GIRWPESIAPFKVGIVNLLTTNEDCKTTAETIYAALADS---SLYDDSTDSPGVKLARMD 381

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +  +P  +I G+    ++ + ++   +  T+K ++   I  + 
Sbjct: 382 LLGMPWQVIIGNSFVKDKVVELKNRANGATEKCTVDALIARMQ 424


>gi|255004184|ref|ZP_05278985.1| prolyl-tRNA synthetase [Anaplasma marginale str. Virginia]
          Length = 425

 Score =  183 bits (465), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 74/403 (18%), Positives = 146/403 (36%), Gaps = 28/403 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRA 316
           + ++ SG+  W   G K+ +T+   +R ++    + EI  P V    LW++S  +DSY  
Sbjct: 32  VRQNASGLYTWLPLGLKVLRTIEHIVREEMDSSGFLEILMPSVQPADLWRESLRYDSYGP 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  ++      +  R     P +      V    LKSYR+LP+ L +    +R+E    
Sbjct: 92  EMLRMQD-----RSGREMVFGPTHEEAISDVVRSSLKSYRDLPINLYQIQWKFRDELRPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
            HG+MR R F   DA+ F    E +      + +    I++  G   I  K  +      
Sbjct: 147 -HGIMRGREFLMKDAYSFDVDFEGVMRSYENVFSAYFRIFRRLGLVPIAAKADSGAIGGS 205

Query: 436 GSDALW------DDAENIMKGVLDTIKNSS--QDRINTGVLLGEGAFYGPKFEYILKD-A 486
            S          +      K  LD  KN     + I +     E A           D  
Sbjct: 206 ISHEFHVLVPTGESTVYHDKKALDLSKNDYCTTEEIASVYAATEDAHDPQNCGVDPNDLQ 265

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE----NF 542
           + +  +   +    +  S       +  +      ++     G I R +  +IE    + 
Sbjct: 266 VSKGIEVAHVFYLGDRYSAPMNVKFHDKNGNSAHALMGCYGIG-ISRLVAAIIEVFHDDV 324

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEY---AQEIANLLKSHHLSIETDFRNETINYKIREHS 599
               P  ++P +  +  + ++  +    A+ I   L         D   ++   K+    
Sbjct: 325 GIRWPESIAPFKVGIVNLLTTNEDCKTTAETIYAALADS---SLYDDSTDSPGVKLARMD 381

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +  +P  +I G+    ++ + ++   +  T+K ++   I  + 
Sbjct: 382 LLGMPWQVIIGNSFVKDKVVELKNRANGATEKCTVDALIARMQ 424


>gi|73666953|ref|YP_302969.1| prolyl-tRNA synthetase [Ehrlichia canis str. Jake]
 gi|114152194|sp|Q3YSD4|SYP_EHRCJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|72394094|gb|AAZ68371.1| Prolyl-tRNA synthetase [Ehrlichia canis str. Jake]
          Length = 424

 Score =  183 bits (465), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 81/438 (18%), Positives = 156/438 (35%), Gaps = 38/438 (8%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +   +        +     H+   R   +  IA   SG+  W   G ++ + + + +R +
Sbjct: 4   SNYYIPTLKETSADVSVVSHKYSIRAGLIKQIA---SGIYTWLPLGLRVLRNIENIVREE 60

Query: 287 IK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P +    LW++SG +D Y + M  +     T ++ R     P +     
Sbjct: 61  MNKSGALEVLMPLIQPASLWKESGRYDDYGSEMLRI-----TDRNQREMLFGPTHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
                 L S++ LP+ L +    +R+E     +G+MR R F   DA+ F           
Sbjct: 116 DTLRTTLTSHKNLPITLYQIQWKFRDELRPR-YGIMRCREFLMKDAYSFDKDLSGAILSY 174

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA---ENIMKGVLDTIKNSSQD 461
             +    I I+K+ G   I VK  + P     S      A   E+ +    + I+  + D
Sbjct: 175 NLMFKTYIKIFKNLGLTPIAVKAESGPIGGNLSHEFHVLANSGESTLYYDQEIIELMNSD 234

Query: 462 RINTGVLLGEGAFYGPKFEYI-----------LKDAIGRDWQCGTIQVDFNLPSRFNAFY 510
            I+   +      Y    +             +K + G +       +        NA +
Sbjct: 235 NIDIERIKNT---YTAADDMHDPQTCPIPPNNIKTSKGIEI-GHIFYLGDKYSKPMNANF 290

Query: 511 VNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTITSSAVE 566
               +    P+ +     G I R +  +IE F  N     P  +SP +  +  + SS  +
Sbjct: 291 C--DNNDSKPLQMGCYGIG-ISRLVAAIIEVFHDNKGITWPEEISPFKFSLVNLYSSN-D 346

Query: 567 YAQEIANLLK-SHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
              ++A  L    H  +  D  +++   K+    +  +P  II G     +  I +R   
Sbjct: 347 KCIKVAENLHMQLHNDVLYDDTDDSPGIKLTRTDLLGMPWQIIIGKSTVEQDLIEVRNRS 406

Query: 626 STTTQKVSLLDAIPILTK 643
           +     +S+   +    K
Sbjct: 407 NKDKFLISVEQFLKKFKK 424


>gi|148284536|ref|YP_001248626.1| prolyl-tRNA synthetase [Orientia tsutsugamushi str. Boryong]
 gi|146739975|emb|CAM80015.1| prolyl-tRNA synthetase [Orientia tsutsugamushi str. Boryong]
          Length = 433

 Score =  183 bits (465), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 78/425 (18%), Positives = 149/425 (35%), Gaps = 37/425 (8%)

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVL 300
           E   H+ + R   +        G+  W   G K+ Q +   +R+ +      E+  P + 
Sbjct: 19  EIISHKLMLRAGMIKQACA---GIYNWLPLGIKVLQNIQDIVRKNMNAAQCTELLMPCIQ 75

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
              LW++S  +++Y   M  +K   D           P N      +F   ++SY++LP 
Sbjct: 76  PASLWKESSRYNAYGKEMLKIKDRHDN-----DLLFGPTNEELITDIFRSCIQSYKDLPK 130

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDFG 419
                   +R+E      G+MR R F   DA+ F   +    +    ++   + I+KD G
Sbjct: 131 NFYHIQWKFRDEIRPRF-GVMRSREFIMKDAYSFDIDQTSAIQSYNLMYLTYLKIFKDLG 189

Query: 420 FEKIMVK-----------LSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
            + I V+                    G   ++ D+        D  ++ S +++    +
Sbjct: 190 LKVIPVQADNGAIGGKLSHEFHIITATGDSKIYYDSTKF--NPFDYNQDLSLNKLEQLYI 247

Query: 469 LGEGAFYGPKFEY---ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
           + E      + +     +    G +   G I       S      +   + K   V +  
Sbjct: 248 VTEDKHKTYQNQISNDKISTISGIE--VGHIFYFGTKYSELMKACIQMQNGKLTAVEMGS 305

Query: 526 AVFGSIERFIGIMIENFKGNLPL-WL---SPIQAIVT---TITSSAVEYAQEIANLLKSH 578
              G I R IG +IE       + W    +P +  V           + + ++  +L   
Sbjct: 306 YGIG-ISRLIGAIIEANHDQYGIIWPQNVAPFKVSVINLLPNNDKCKQTSNQLYQILTQQ 364

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
                 D  + +  +K+  H +  IP  II G       +I  +   +   QK+S+   I
Sbjct: 365 KTDALLDDTSSSAGHKLAVHDLIGIPYQIIIGKNFIETSTIEFKYRHNHQLQKLSIDALI 424

Query: 639 PILTK 643
             LT+
Sbjct: 425 NRLTE 429


>gi|317054829|ref|YP_004103296.1| prolyl-tRNA synthetase [Ruminococcus albus 7]
 gi|315447098|gb|ADU20662.1| prolyl-tRNA synthetase [Ruminococcus albus 7]
          Length = 480

 Score =  183 bits (465), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 68/429 (15%), Positives = 153/429 (35%), Gaps = 56/429 (13%)

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR 284
               +++   +  ++E   + +  +  + +L         ++     G+ I++ +   + 
Sbjct: 1   MAKNKKMVDAITSMDEDFAKWYTDICTKAELIAYTSVKGCMVI-RPYGYAIWENIQKILD 59

Query: 285 RKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
            + K   +E +  P  + + L  ++  H + +   +  V        + R   ++P +  
Sbjct: 60  SRFKALGHENVCMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGSEKLEDR-LCVRPTSET 118

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH-VFCTKEQMF 401
                + + + SYR+LP    ++ SV R E   +    +R R F   + H +  T E+  
Sbjct: 119 LFCEHYANIVHSYRDLPKLYNQWVSVVRWEK--TTRPFLRSREFLWQEGHTIHETPEEAI 176

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E  ++ N      +      ++    T  +K  G++A +                    
Sbjct: 177 EETERMLNCYADFCEKDLAMPVVKGRKTDSDKFAGAEATY-------------------- 216

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHP 520
                             E ++ D  G+  Q GT           F   +    ++   P
Sbjct: 217 ----------------AIEALMHD--GKALQAGTSHYFGDGFAKAFGIQFTGRDNKLAFP 258

Query: 521 VMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTI---TSSAVEYAQEIAN 573
              H+  +G   R IG +I     +    LP  ++PIQA++  +       +E A E+  
Sbjct: 259 ---HQTSWGVTTRLIGAIIMTHGDDNGLVLPPAVAPIQAVIVPVQQFKEGVLEKANEVYE 315

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            LK+  + ++ D  +++  +K  E+ +K +P+ I  G K+       I            
Sbjct: 316 QLKAAGIRVKLDDSDQSPGWKFAEYEMKGVPVRIELGPKDIENGQCVIVTRHDREKTFTP 375

Query: 634 LLDAIPILT 642
           L + +  + 
Sbjct: 376 LTELVETVN 384


>gi|16081983|ref|NP_394395.1| prolyl-tRNA synthetase [Thermoplasma acidophilum DSM 1728]
 gi|74581452|sp|Q9HJN0|SYP_THEAC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|10640252|emb|CAC12066.1| prolyl-tRNA synthetase related protein [Thermoplasma acidophilum]
          Length = 462

 Score =  183 bits (464), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 77/399 (19%), Positives = 156/399 (39%), Gaps = 52/399 (13%)

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEE 293
           +   +E+    + ++    +L        G+  W   GWKI   + S +RR +   +++E
Sbjct: 1   MENKKENFSEWYNEIITLAELSDKRYPVKGMNVWLPYGWKIMSLIDSIVRRAVDKRNFQE 60

Query: 294 INTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           +N P ++ + + + +  H   +   ++ V       K     AL+P +      +F+  +
Sbjct: 61  VNFPILIGRSMLEVEFEHIRGFENEIYWVTKGGKE-KLEEELALRPTSESAMYPMFSLWI 119

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
           +S+ +LP+++ +  SVYR E        +R+R     +AH      +     +  +    
Sbjct: 120 RSHADLPLKIYQIVSVYRYETK-HTRSFIRIREIHFFEAHTAHATYEDAEAQMDQYK--- 175

Query: 413 SIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
                                      +W +  +++       +    D+         G
Sbjct: 176 --------------------------EIWREISSLLCLPYFYDQRPDWDKFP-------G 202

Query: 473 AFYGPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
           A Y   F+ +L    GR  Q GTI Q   N    ++  Y+       +    H+  +G  
Sbjct: 203 AMYTIAFDTVLP--SGRSLQIGTIHQYGTNFSKNYDIKYLKEDGTFDYA---HQTTYGMS 257

Query: 532 ERFIGIMIENFKGNLPLWLSPIQA-----IVTTITSSAVEYAQEIANLLKSHHLSIETDF 586
           ER +  +I     +  L L P  A     I+    +  +EYA+++ N L S ++ ++ D 
Sbjct: 258 ERLLAAIIGIHGDDKGLVLPPDVAPIQVIIIPIPGAGVMEYARDVENTLNSINIRVKVDD 317

Query: 587 R-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRF 624
           R N T  YK  +  ++ +P+ I  G++E   R++ I   
Sbjct: 318 RENYTPGYKFNDWEMRGVPLRIEIGEREVKNRTLTISMR 356


>gi|254780870|ref|YP_003065283.1| prolyl-tRNA synthetase [Candidatus Liberibacter asiaticus str.
           psy62]
 gi|254040547|gb|ACT57343.1| prolyl-tRNA synthetase [Candidatus Liberibacter asiaticus str.
           psy62]
          Length = 449

 Score =  183 bits (464), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 80/448 (17%), Positives = 155/448 (34%), Gaps = 52/448 (11%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  L        ++E   H+ + R      I +   G+  W   G K    + + +R +
Sbjct: 4   SKYFLPILQENPRDAEIASHKLMLRTGM---IHQHSKGIYSWLPLGQKALDNVNAIIREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
                  E++ P +    LW +SG +DSY   M  +   +D           P +     
Sbjct: 61  QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA-----MIYGPTHEEVMT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNEC 404
            +F   +KSYR LP    +    +R+E      G+MR R F   DA+ F  T E   +  
Sbjct: 116 DIFRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            K+    + I+   G + I ++  + P     S         ++    +T    S+D ++
Sbjct: 175 NKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF-----IVLADTGETQVFCSKDFMD 229

Query: 465 TGVLLGEGAF----------------YGPKFEYI---LKDAIG-------RDWQCGTIQV 498
             +      F                Y    +     L D++        R  + G I  
Sbjct: 230 FPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFY 289

Query: 499 -DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN-FKGNLPLWL---SPI 553
                    +A +  +  +  +  M    +     R +  +IE+   G   +W    +P 
Sbjct: 290 FGTKYSLPMSATFKGADGKDHYVQMGSYGIGAM--RVVAAVIESSHDGKGIIWPDSVAPF 347

Query: 554 QAIVTTITSS---AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           +  +  I +      +  ++I   L      +  D   E I  +     +   P+ +I G
Sbjct: 348 KISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVG 407

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAI 638
            K  S+  + I+   +   + +SL + I
Sbjct: 408 SKFVSDSKVEIKHRLTGIREDMSLEEVI 435


>gi|89053551|ref|YP_509002.1| prolyl-tRNA synthetase [Jannaschia sp. CCS1]
 gi|114152201|sp|Q28TI5|SYP_JANSC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|88863100|gb|ABD53977.1| prolyl-tRNA synthetase [Jannaschia sp. CCS1]
          Length = 452

 Score =  183 bits (464), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 74/433 (17%), Positives = 150/433 (34%), Gaps = 38/433 (8%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQ 298
           E++   HR + R      I +  +G+  W   G+K+ + +   +  + I+  +  +  P 
Sbjct: 17  EAQIVSHRLMLRAGM---IKQASAGIYSWLPLGYKVLKRIERIVHEEQIRAGHIPMLMPT 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG +D+Y   M  +K   D     R     P N      +    + SY+ L
Sbjct: 74  LQSADLWQKSGRFDAYGPEMLRLKDRHD-----RDMLYGPTNEEMITDMVGTFVTSYKSL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKD 417
           P+ L      +R+E      G+MR R F   D + F  TKE   +   +     +  Y+ 
Sbjct: 129 PLTLYHIQWKFRDEVRPRF-GVMRGREFLMKDGYNFDLTKEAALHAYNRHLVSYLRTYER 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF--- 474
            G + I ++  + P     +      A+     V    + +     +  +   + A    
Sbjct: 188 MGLQAIPMRADSGPIGGDYTHEFLVLADTGESEVFYDAEITDLKFGDREIDYDDVAQCDA 247

Query: 475 --------YGPKFEYILKDAI-----GRDWQCGTI---QVDFNLPSRFNAFYVNSHSEKC 518
                   Y    E   +         R      I   Q+ +           +  +++ 
Sbjct: 248 VLQEFTSRYARTDETHDEAEFAAIPGDRQRSARGIEVGQIFYFGTEYSEKLGAHVQNDEG 307

Query: 519 HPVMIHRAVFGS-IERFIGIMIE-NFKGNLPLWL---SPIQAIVTTITSSAVEYAQE--- 570
             V +H    G  + R +G +IE +      +W    +P    +  +     E       
Sbjct: 308 ERVPLHMGSHGIGVSRLLGAIIEASHDDKGIIWPEGVTPFHCGIVNLKQGDAEADAACEA 367

Query: 571 IANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
           +   L++  L    D RNE    K     +  +P  I  G +      + +    +  ++
Sbjct: 368 LETALENAGLEPLYDDRNERAGGKFATMDLIGLPWRITVGPRGLKNGVVELTSRRTGESE 427

Query: 631 KVSLLDAIPILTK 643
           +++   A+  + +
Sbjct: 428 ELTPDAAVARVAE 440


>gi|84489803|ref|YP_448035.1| prolyl-tRNA synthetase [Methanosphaera stadtmanae DSM 3091]
 gi|114152212|sp|Q2NFL1|SYP_METST RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|84373122|gb|ABC57392.1| ProS [Methanosphaera stadtmanae DSM 3091]
          Length = 469

 Score =  183 bits (464), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 75/418 (17%), Positives = 158/418 (37%), Gaps = 58/418 (13%)

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLD- 301
                 +  E +L        G+  W  +G++I +  ++ ++  +  D+EE+  P ++  
Sbjct: 5   SEWFHNILEEAELMDARYPIKGMSVWLPRGFQIRKYALNALQELLDKDHEEVLFPMLIPQ 64

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             L +++ H   +   ++ V             AL+P +      +F+  ++S+ +LP++
Sbjct: 65  SELAKEAIHVKGFEEEVYWVTKGGKRDL-NEHLALRPTSETSIYPMFSLWVRSHMDLPIK 123

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDD--AHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           + +  + +R E       L+RVR  T  +       T+E+   E ++   +  + + + G
Sbjct: 124 VYQTVNTFRYETK-HTRPLIRVREITTFNETHTAHATEEEAEKEVMEGIEIYKTFFDELG 182

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
               + K              WD                             G+ Y   F
Sbjct: 183 IPYSISKRPE-----------WDKF--------------------------PGSKYTMAF 205

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRF-NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           + I+ D  G+  Q  T+    NL + F + F +   +E      +H+  +G  +R I  +
Sbjct: 206 DMIMPD--GKTLQIATVH---NLGTTFAHTFDIQFENEDGTHDYVHQVCYGLSDRVIASL 260

Query: 539 IENFKGN----LPLWLSPIQAIVTTIT-----SSAVEYAQEIANLLKSHHLSIETDFRNE 589
           I          LP  ++P Q I+  I         + +   +  LLK++ + ++ D R  
Sbjct: 261 IAAHGDEKGLSLPPVVAPEQVIIIPIIFKENQDVVLNFTDNLEKLLKNNGIRVKQDKREL 320

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD-AIPILTKESL 646
               K  E   + +P+ I  G ++    +I I R  +   + V   +  I  + K+ L
Sbjct: 321 RPGKKYYEWEKRGVPLRIEVGPRDIENNTIVINRRDTGDKEFVDYDENTIVDVVKDRL 378


>gi|229083697|ref|ZP_04216020.1| Prolyl-tRNA synthetase 2 [Bacillus cereus Rock3-44]
 gi|228699626|gb|EEL52288.1| Prolyl-tRNA synthetase 2 [Bacillus cereus Rock3-44]
          Length = 476

 Score =  183 bits (464), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 83/429 (19%), Positives = 167/429 (38%), Gaps = 60/429 (13%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           E  Q +  +EE   + +  + ++ +L   +    G +     G+ +++ +   M  K+K 
Sbjct: 4   EQVQAITKMEEDFAQWYTDIVKKAELVDYSSVK-GCMILRPYGYALWENIQKVMDEKLKA 62

Query: 290 -DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
             +E +  P  + + L  ++  H + +   +  V    D     R   ++P +       
Sbjct: 63  SGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGDEKLAER-LCVRPTSETLFCEH 121

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH-VFCTKEQMFNECLK 406
           F+  ++SY +LP    ++ SV R E   +    +R   F   + H +  T E+   E L 
Sbjct: 122 FSKIVQSYNDLPKLYNQWCSVVRWEK--TTRPFLRTTEFLWQEGHTIHETAEESQEETLN 179

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           I NL  S  +D+    ++    T  EK  G+ A +                         
Sbjct: 180 ILNLYASFCEDYLAIPVIKGQKTDKEKFAGAKATY------------------------- 214

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
                        E ++ D  G+  Q GT      N    F+  +++ + +  +   +H+
Sbjct: 215 -----------TIESLMHD--GKALQTGTSHNFGTNFSEAFDIKFLDRNGKWQY---VHQ 258

Query: 526 AVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSH 578
             +G   R IG +I    +N    +P  ++P+Q I+  I       +E A  +   ++  
Sbjct: 259 TSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQVIIVPIAQHKEGVLEKAAGLQERIQKV 318

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS---LL 635
              ++ D  N+T  +K  E+ +K +PI +  G K+  +  + + R  +   + VS   L 
Sbjct: 319 -ARVKIDASNKTPGWKFNEYEMKGVPIRLEVGPKDIEKNQVVLVRRDTKEKEFVSMDQLE 377

Query: 636 DAIPILTKE 644
           + I  L  E
Sbjct: 378 ERITSLLNE 386


>gi|229009880|ref|ZP_04167100.1| Prolyl-tRNA synthetase 2 [Bacillus mycoides DSM 2048]
 gi|228751498|gb|EEM01304.1| Prolyl-tRNA synthetase 2 [Bacillus mycoides DSM 2048]
          Length = 476

 Score =  183 bits (464), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 81/429 (18%), Positives = 172/429 (40%), Gaps = 60/429 (13%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           E  Q +  +EE   + +  + ++ +L   +    G +     G+ +++ +   M  K+K+
Sbjct: 4   EQVQAITKMEEDFAQWYTDIVKKAELVDYSSVK-GCMILRPYGYALWENMQKVMDEKLKE 62

Query: 290 -DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
             +E +  P  + + L  ++  H + +   +  V    D     R   ++P +       
Sbjct: 63  SGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGDEKLAER-LCIRPTSETLFCEH 121

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH-VFCTKEQMFNECLK 406
           F+  ++SY +LP    ++ SV R E   +    +R   F   + H +  T E+   E L 
Sbjct: 122 FSKIVQSYNDLPKLYNQWCSVVRWEK--TTRPFLRTTEFLWQEGHTIHETAEESQIETLN 179

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           I NL  +  +++    ++    T  EK  G+ A +                         
Sbjct: 180 ILNLYAAFCEEYLAIPVIKGQKTEKEKFAGAKATY------------------------- 214

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
                        E ++ D  G+  Q GT      N    F+  +++ + +  +   +H+
Sbjct: 215 -----------TIESLMHD--GKALQTGTSHNFGTNFSEAFDIKFLDRNGKWQY---VHQ 258

Query: 526 AVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSH 578
             +G   R IG +I    +N    +P  ++P+Q ++  I       +E A E+   ++  
Sbjct: 259 TSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLEKATELQGRIQKV 318

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS---LL 635
              ++ D  N+T  +K  E+ +K +PI +  G K+  +  + + R  +   + +S   L 
Sbjct: 319 -ARVKIDASNKTPGWKFNEYEMKGVPIRLEVGPKDIEKNQVVLVRRDTKEKEFISMDQLE 377

Query: 636 DAIPILTKE 644
           + IP+L +E
Sbjct: 378 ERIPVLLEE 386


>gi|229131392|ref|ZP_04260291.1| Prolyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST196]
 gi|228652083|gb|EEL08021.1| Prolyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST196]
          Length = 476

 Score =  183 bits (464), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 81/429 (18%), Positives = 172/429 (40%), Gaps = 60/429 (13%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           E  Q +  +EE   + +  + ++ +L   +    G +     G+ +++ +   M  K+K+
Sbjct: 4   EQVQAIAKMEEDFAQWYTDIVKKAELVDYSSVK-GCMILRPYGYALWENMQKVMDEKLKE 62

Query: 290 -DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
             +E +  P  + + L  ++  H + +   +  V    D     R   ++P +       
Sbjct: 63  SGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGDEKLAER-LCIRPTSETLFCEH 121

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH-VFCTKEQMFNECLK 406
           F+  ++SY +LP    ++ SV R E   +    +R   F   + H +  T E+   E L 
Sbjct: 122 FSKIVQSYNDLPKLYNQWCSVVRWEK--TTRPFLRTTEFLWQEGHTIHETAEESQIETLN 179

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           I NL  +  +++    ++    T  EK  G+ A +                         
Sbjct: 180 ILNLYAAFCEEYLAIPVIKGQKTEKEKFAGAKATY------------------------- 214

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
                        E ++ D  G+  Q GT      N    F+  +++ + +  +   +H+
Sbjct: 215 -----------TIESLMHD--GKALQTGTSHNFGTNFSEAFDIKFLDRNGKWQY---VHQ 258

Query: 526 AVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSH 578
             +G   R IG +I    +N    +P  ++P+Q ++  I       +E A E+   ++  
Sbjct: 259 TSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLEKATELQGRIQKV 318

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS---LL 635
              ++ D  N+T  +K  E+ +K +PI +  G K+  +  + + R  +   + +S   L 
Sbjct: 319 -ARVKIDASNKTPGWKFNEYEMKGVPIRLEVGPKDIEKNQVVLVRRDTKEKEFISMDQLE 377

Query: 636 DAIPILTKE 644
           + IP+L +E
Sbjct: 378 ERIPVLLEE 386


>gi|56416716|ref|YP_153790.1| prolyl-tRNA synthetase [Anaplasma marginale str. St. Maries]
 gi|81821288|sp|Q5PAZ5|SYP_ANAMM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|56387948|gb|AAV86535.1| prolyl-tRNA synthetase [Anaplasma marginale str. St. Maries]
          Length = 425

 Score =  183 bits (464), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 74/404 (18%), Positives = 148/404 (36%), Gaps = 30/404 (7%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRA 316
           + ++ SG+  W   G K+ +T+   +R ++    + EI  P V    LW++S  +DSY  
Sbjct: 32  VRQNASGLYTWLPLGLKVLRTIERIVREEMDSSGFLEILMPSVQPADLWRESLRYDSYGP 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  ++      +  R     P +      V    LKSYR+LP+ L +    +R+E    
Sbjct: 92  EMLRMQD-----RSGREMVFGPTHEEAISDVVRSSLKSYRDLPINLYQIQWKFRDELRPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
            HG+MR R F   DA+ F    E +      + +    I++  G   I  K  +      
Sbjct: 147 -HGIMRGREFLMKDAYSFDVDFEGVMRSYENVFSAYFRIFRRLGLVPIAAKADSGAIGGS 205

Query: 436 GSDALW------DDAENIMKGVLDTIKNSS--QDRINTGVLLGEGAFYGPKFEYILKD-A 486
            S          +      K  LD  KN     + I +     E A           D  
Sbjct: 206 ISHEFHVLVPTGESTVYHDKKALDLSKNDYCTTEEIASVYAATEDAHDPQNCGVDPNDLQ 265

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE----N 541
           + +  +   +  +     +  N  + +      H +M    +   I R +  +IE    +
Sbjct: 266 VSKGIEVAHVFYLGDRYSAPMNVKFHDKDGNSAHALMGCYGI--GISRLVAAIIEVFHDD 323

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEY---AQEIANLLKSHHLSIETDFRNETINYKIREH 598
                P  ++P +  +  + ++  +    A+ I   L         D   ++   K+   
Sbjct: 324 VGIRWPESIAPFKVGIVNLLTTNEDCKTTAETIYAALADS---SLYDDSTDSPGVKLARM 380

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +  +P  +I G+    ++ + ++   +  T++ ++   I  + 
Sbjct: 381 DLLGMPWQVIIGNSFVKDKVVELKNRANGATERCTVDALIARMQ 424


>gi|310815331|ref|YP_003963295.1| prolyl-tRNA synthetase [Ketogulonicigenium vulgare Y25]
 gi|308754066|gb|ADO41995.1| prolyl-tRNA synthetase [Ketogulonicigenium vulgare Y25]
          Length = 445

 Score =  183 bits (464), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 81/441 (18%), Positives = 152/441 (34%), Gaps = 41/441 (9%)

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLF--HIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
             L++Y   + +    + + L+    L    I ++ +G+  W   G+K+   L   +  +
Sbjct: 1   MRLSRYFLPVLKENPAEAQILSHRYMLRAGMIKQESAGIYAWLPLGYKVLSRLEKIVHEE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +   +  +  P +    LW++SG +D+Y   M  +     T ++ R     P N     
Sbjct: 61  QQRAGHIPLLMPTLQSADLWRESGRYDAYGPEMLRM-----TDRNKREMLFGPTNEEMIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNEC 404
            +F   ++SY++LP+ L      +R+E      G+MR R F   D + F  T+E   +  
Sbjct: 116 DIFRSYVRSYKDLPLTLYHIQWKFRDEMRPRF-GVMRGREFLMKDGYNFDLTREDALHAY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIK----NSSQ 460
            +     +  Y+  G   I ++  + P     +      A      V            +
Sbjct: 175 NRHMVSYLRTYERMGLTAIPMRADSGPIGGDDTHEFLVLANTGESEVFYDEDVTRLKLGE 234

Query: 461 DRINTGVLLGEGA----FYGP------KFEYILKDAI-------GRDWQCGTIQV-DFNL 502
             IN        A    F  P        +  L DAI       GR  + G I       
Sbjct: 235 RAINYDNREEVAAICQEFTTPYARTDETHDAALFDAIPEGRRKVGRGIEVGQIFYFGTKY 294

Query: 503 PSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNLPLWL---SPIQAIVT 558
                A   N+   K  PV +     G   R IG +IE N      +W    +P    + 
Sbjct: 295 SEPMGATVQNAEG-KQVPVEMGSHGIGVS-RLIGALIEANHDDKGIIWPEGVTPFHVGIV 352

Query: 559 TITSS---AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEAS 615
            +      A    + + +   +  L    D R+E    K     +  +P  I  G +   
Sbjct: 353 NLKQGDAEADAACEALHDSFVALGLDPLYDDRDERAGGKFATMDLIGLPWRITVGPRGLK 412

Query: 616 ERSIGIRRFGSTTTQKVSLLD 636
              + +    +  ++++   +
Sbjct: 413 NGVVELTSRRTGVSEELPPEE 433


>gi|332970051|gb|EGK09049.1| proline--tRNA ligase [Desmospora sp. 8437]
          Length = 488

 Score =  183 bits (464), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 69/427 (16%), Positives = 165/427 (38%), Gaps = 58/427 (13%)

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR 284
              +++  + +    E   R +  + R+ DL        G I +   G+++++ +   M 
Sbjct: 1   MADEKKFVKEITPQSEDFSRWYIDVIRKGDLMDYTPVR-GCIVFKPDGFELWERIQEAMD 59

Query: 285 RKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
           R+ K+  +     P ++ +    ++  H + +   +  V  A     + R  AL+P +  
Sbjct: 60  RRFKETGHRNAYFPMLIPESFLQKEKEHVEGFNPELPWVTEAAGEKLEER-LALRPTSET 118

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMF 401
               +++  + S+R+LPV + ++ +V+R E        +R   F   + H    T+E+  
Sbjct: 119 MIGHMYSQWIHSHRDLPVLINQWANVFRWEKR--TMPFLRTSEFLWQEGHTAHATEEEAR 176

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E +++  +   + +      +     T  E+  G+   +                    
Sbjct: 177 QETMQMLEIYREVVEQVLAIPVWKGQKTPSERFAGAVETYS------------------- 217

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHP 520
                             E ++KD  G+  Q GT      N    F+  +++  ++  + 
Sbjct: 218 -----------------IEAMMKD--GKAVQAGTSHYLGENFAKGFDIKFLDRDNQLKY- 257

Query: 521 VMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTIT-----SSAVEYAQEI 571
             +H   +G+  R IG MI    ++    LP  ++P Q ++  +         +E    +
Sbjct: 258 --VHTTSWGTSTRLIGSMIMVHGDDRGLALPPRVAPTQVVMIPVGPVKLREKVMERFDPL 315

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
            + L++  + +  D R ET  +K  E  ++ +P+ +  G ++  +  + + R  +     
Sbjct: 316 FDDLQAAGVRVRADLREETPGWKFNEWEMRGVPLRLEIGPRDVDKGEVVLARRDTGEKMA 375

Query: 632 VSLLDAI 638
           V++  A+
Sbjct: 376 VAIDQAV 382


>gi|54309339|ref|YP_130359.1| putative tRNA synthetase [Photobacterium profundum SS9]
 gi|46913775|emb|CAG20557.1| putative tRNA synthetase [Photobacterium profundum SS9]
          Length = 145

 Score =  183 bits (463), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 58/134 (43%), Positives = 83/134 (61%)

Query: 511 VNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQE 570
           +   +E+  PVMIHRA+ GS+ERFIGI+IE + G  P WLSP QA+V  IT S  EY QE
Sbjct: 1   MGEDNERHTPVMIHRAILGSLERFIGILIEEYAGFFPTWLSPQQAVVMNITDSQSEYVQE 60

Query: 571 IANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
           I   L+   + +  D RNE I +KIREH++K++P +++CGDKE     I +R        
Sbjct: 61  IVKKLQKCGIRVNADLRNEKIGFKIREHTLKRVPYMLVCGDKEVEAGEIAVRTRKGKDLG 120

Query: 631 KVSLLDAIPILTKE 644
           K+ + + +  L +E
Sbjct: 121 KLKIDELVAFLQQE 134


>gi|297527274|ref|YP_003669298.1| prolyl-tRNA synthetase [Staphylothermus hellenicus DSM 12710]
 gi|297256190|gb|ADI32399.1| prolyl-tRNA synthetase [Staphylothermus hellenicus DSM 12710]
          Length = 483

 Score =  183 bits (463), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 72/424 (16%), Positives = 153/424 (36%), Gaps = 56/424 (13%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-D 290
            ++         + + ++ +   +        G+  W   G K  + +   M   +++  
Sbjct: 8   ERFRLDKYSDFPKWYHEILKHAKIVDTRYPVKGMNVWMPYGLKALRMIQKIMINLLEETG 67

Query: 291 YEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
           +EE   P ++ + ++ ++      +    F V+    T K      ++P +      ++N
Sbjct: 68  HEEAYFPTMIPESVFSKEKDFLQGFGGETFVVEGT-MTKKFNEKLFVRPTSETVMYYMWN 126

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRG-FTQDDAHV-FCTKEQMFNECLKI 407
             +K  ++LP+++ +  +V+R E     H ++RVR   +  +AH    T E+   +  + 
Sbjct: 127 IWIKGRKDLPLKMYQIVNVFRYETK-MTHPILRVREIMSFIEAHTAHATSEEAEKQINEA 185

Query: 408 HNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGV 467
            N+    +        +VK              WD                         
Sbjct: 186 LNIYKKFFDSLLLPYFIVKTPP-----------WDTF----------------------- 211

Query: 468 LLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAV 527
               GA Y   F   + D  G +     I +       F+  +++S  +  +   +++  
Sbjct: 212 ---AGAEYNYDFITAMPDGKGLEL-GSVINLGQKFARAFDIKFMDSDGKTKY---VYQTC 264

Query: 528 FGSIERFIGIMIENFKGNLPLWL----SPIQAIVTTIT----SSAVEYAQEIANLLKSHH 579
           +G  ER +G +I        L+L    +PIQ ++  I        +EYA+ I+  L    
Sbjct: 265 YGVSERTLGAVIAIHGDKKGLFLPPIIAPIQVVIVPIARRDEQDIIEYARGISEKLSEAG 324

Query: 580 LSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           +    D   E T  +K     +K +P  I  G +E +  ++ I R        V++ + I
Sbjct: 325 IRTYLDDDPEHTPGWKYYFWEMKGVPTRIEIGRRELNNNTVTIARRDGAKKITVNINELI 384

Query: 639 PILT 642
             L 
Sbjct: 385 DKLR 388


>gi|153870647|ref|ZP_02000003.1| threonyl-tRNA synthetase [Beggiatoa sp. PS]
 gi|152072887|gb|EDN69997.1| threonyl-tRNA synthetase [Beggiatoa sp. PS]
          Length = 191

 Score =  183 bits (463), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 67/165 (40%), Positives = 103/165 (62%), Gaps = 4/165 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SI 59
           MP    +T PDGS + F    T +DVA SI   LAK A+A  IN ++ D S  + +   +
Sbjct: 1   MP---IITLPDGSQRQFENPITVADVATSIGPGLAKAAIAGKINDRLVDTSTMIEDDVQL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT  DP  L +IRHSCAH+MA+AV+S++P  QV IGP++E GFYYDF  E+ FS ++L
Sbjct: 58  AIITDRDPDGLEIIRHSCAHLMAQAVKSLFPTAQVTIGPVVEHGFYYDFAYEKSFSPEDL 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES 164
            +I+ KM+E++A++    +  +S  +A + F    +  ++++L  
Sbjct: 118 EKIQAKMEELVAQNFTVTRSVMSRHEAIQFFRGLAKNIRLKLLNR 162


>gi|218884312|ref|YP_002428694.1| prolyl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n]
 gi|218765928|gb|ACL11327.1| prolyl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n]
          Length = 479

 Score =  183 bits (463), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 74/426 (17%), Positives = 158/426 (37%), Gaps = 56/426 (13%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
                    E+    ++ + +E  +  I     G+  W   G K  +     +   ++  
Sbjct: 4   RKSIGIDKYENFPEWYQAVLKEAGVIDIRYPVKGMYVWMPYGLKALRLTQRIIVDLLEKT 63

Query: 290 DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
            ++E   P ++ + ++ ++      +    F V+    T +      ++P +      ++
Sbjct: 64  GHQEAYFPTMVPESVFSREKDFLQGFGGETFIVEGT-MTRRFNERLFVRPTSETVMYYMW 122

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRG-FTQDDAHV-FCTKEQMFNECLK 406
           N  +K  ++LP+++ +  +V+R E     H ++RVR      +AH    ++E+   + ++
Sbjct: 123 NMWIKGRKDLPLKMYQVVNVFRYETK-MTHPILRVREIMGFIEAHTAHHSREEAEKQIIE 181

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
              +    +        +VK              WD                        
Sbjct: 182 AIGIYKEFFNRLQLPYFIVKTPP-----------WDTF---------------------- 208

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
                GA Y   F  ++ D  G +     I +       F   ++++  E+ +   +++ 
Sbjct: 209 ----AGAEYNYDFITVMPDGKGLEL-GSVINLGQKFAGAFEIKFMDTDGEEKY---VYQT 260

Query: 527 VFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTIT----SSAVEYAQEIANLLKSH 578
            +G  ER +G +I    +      P  ++PIQ ++  I        +EYA +I ++L+SH
Sbjct: 261 CYGVSERVLGAVIGIHGDEVGLFFPPEIAPIQVVIVPIMKPGEKEILEYALKIGSMLESH 320

Query: 579 HLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
            L +  D   E T  +K     +K +P  I  G +E    ++ I R      Q V L + 
Sbjct: 321 GLRVFIDSDLEHTPGWKYYYWEMKGVPTRIEVGAREVETSTVTIARRDKREKQVVRLEEV 380

Query: 638 IPILTK 643
           +  L K
Sbjct: 381 LETLRK 386


>gi|163938386|ref|YP_001643270.1| prolyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|163860583|gb|ABY41642.1| prolyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
          Length = 476

 Score =  183 bits (463), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 81/429 (18%), Positives = 172/429 (40%), Gaps = 60/429 (13%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           E  Q +  +EE   + +  + ++ +L   +    G +     G+ +++ +   M  K+K+
Sbjct: 4   EQVQAITKMEEDFAQWYTDIVKKAELVDYSSVK-GCMILRPYGYALWENMQKVMDEKLKE 62

Query: 290 -DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
             +E +  P  + + L  ++  H + +   +  V    D     R   ++P +       
Sbjct: 63  SGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGDEKLVER-LCIRPTSETLFCEH 121

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH-VFCTKEQMFNECLK 406
           F+  ++SY +LP    ++ SV R E   +    +R   F   + H +  T E+   E L 
Sbjct: 122 FSKIVQSYNDLPKLYNQWCSVVRWEK--TTRPFLRTTEFLWQEGHTIHETAEESQIETLN 179

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           I NL  +  +++    ++    T  EK  G+ A +                         
Sbjct: 180 ILNLYAAFCEEYLAIPVIKGQKTEKEKFAGAKATY------------------------- 214

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
                        E ++ D  G+  Q GT      N    F+  +++ + +  +   +H+
Sbjct: 215 -----------TIESLMHD--GKALQTGTSHNFGTNFSEAFDIKFLDRNGKWQY---VHQ 258

Query: 526 AVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSH 578
             +G   R IG +I    +N    +P  ++P+Q ++  I       +E A E+   ++  
Sbjct: 259 TSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLEKATELQGRIQKV 318

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS---LL 635
              ++ D  N+T  +K  E+ +K +PI +  G K+  +  + + R  +   + +S   L 
Sbjct: 319 -ARVKIDVSNKTPGWKFNEYEMKGVPIRLEVGPKDIEKNQVVLVRRDTKEKEFISMDQLE 377

Query: 636 DAIPILTKE 644
           + IP+L +E
Sbjct: 378 ERIPVLLEE 386


>gi|146276453|ref|YP_001166612.1| prolyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17025]
 gi|166980148|sp|A4WPJ3|SYP_RHOS5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|145554694|gb|ABP69307.1| prolyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17025]
          Length = 445

 Score =  183 bits (463), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 74/441 (16%), Positives = 151/441 (34%), Gaps = 46/441 (10%)

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEI 294
               E++   HR + R      I +  +G+  W   G+K  + +   +  + I+  +  +
Sbjct: 13  ENPSEAQIVSHRFMLRAGM---IKQQAAGIYSWLPLGFKALKRVEQIVHEEQIRAGHIPL 69

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
             P +    LW++SG +D Y   M  +     T +  R     P N      +F   + S
Sbjct: 70  LMPTLQPADLWRESGRYDDYGEEMLRI-----TDRHKRDMLYGPTNEEMITDIFRSHVNS 124

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIIS 413
           Y++LP+ L      +R+E      G+MR R F   D + F    +   +   +     + 
Sbjct: 125 YKDLPLTLYHVQWKFRDEIRPRF-GVMRGREFLMKDGYNFDLDFDSAIHAYNRHMVSYLR 183

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDAL------------WDDAENIMK-----------G 450
            Y+  G + I ++ ++ P     +               +D A   +K            
Sbjct: 184 TYERMGLQAIPMRAASGPIGGDNTHEFLVLASTGESEVFYDAAITDLKFGDRVVDYDSRE 243

Query: 451 VLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFY 510
             + I               + A +    E   + + G +                 A  
Sbjct: 244 ECEAIVKEWTTPYARTDETHDEAIFNAIPEERRRTSRGIEV-GQIFYFGTKYSEPMGATV 302

Query: 511 VNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGNLPLWL---SPIQAIVTTI--TSS 563
           V +   +   V +H    G  + R +G +IE +      +W    +P    +  +    S
Sbjct: 303 VTADGAR---VPVHMGSHGIGVSRLLGAIIEASHDDKGIIWPEGVTPFHVGIVNLKQGDS 359

Query: 564 AVEYAQE-IANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           + + A E +   L +  L    D R+E    K     +  +P  I  G +  +   + + 
Sbjct: 360 STDLACEALYRDLSAKGLEPLYDDRDERAGAKFATMDLIGLPWRITVGPRGIAAGKVELT 419

Query: 623 RFGSTTTQKVSLLDAIPILTK 643
              +  ++++S   A+  L +
Sbjct: 420 NRRTGESEEMSSGAAVDRLAQ 440


>gi|254724859|ref|ZP_05186642.1| prolyl-tRNA synthetase [Bacillus anthracis str. A1055]
          Length = 510

 Score =  182 bits (462), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 83/429 (19%), Positives = 169/429 (39%), Gaps = 60/429 (13%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           E  Q +  +EE   + +  + ++ +L   +    G +     G+ +++ +   M  K+K 
Sbjct: 4   EQVQAITKMEEDFAQWYTDIVKKAELVDYSSVK-GCMILRPYGYALWENMQKVMDEKLKA 62

Query: 290 -DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
             +E +  P  + + L  ++  H + +   +  V    D     R   ++P +       
Sbjct: 63  TGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGDEKLAER-LCVRPTSETLFCEH 121

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH-VFCTKEQMFNECLK 406
           F+  ++SY +LP    ++ SV R E   +    +R   F   + H +  T E+   E L 
Sbjct: 122 FSKIVQSYNDLPKLYNQWCSVVRWEK--TTRPFLRTTEFLWQEGHTIHETAEESQAETLN 179

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           I NL  S  +D+    ++    T  EK  G+ A +                         
Sbjct: 180 ILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKATY------------------------- 214

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
                        E ++ D  G+  Q GT      N    F+  +++ + +  +   +H+
Sbjct: 215 -----------TIESLMHD--GKALQTGTSHNFGTNFSEAFDIKFLDRNGKWQY---VHQ 258

Query: 526 AVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSH 578
             +G   R IG +I    +N    +P  ++P+Q ++  I       +  A E+   ++  
Sbjct: 259 TSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLAKATELQGHIQKV 318

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS---LL 635
              ++ D  N+T  +K  E+ +K IPI +  G K+  +  + + R  +   + +S   L 
Sbjct: 319 -ARVKIDASNKTPGWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEKEFISMDQLE 377

Query: 636 DAIPILTKE 644
           + IP L +E
Sbjct: 378 ERIPALLEE 386


>gi|84393193|ref|ZP_00991956.1| threonyl-tRNA synthetase [Vibrio splendidus 12B01]
 gi|84376159|gb|EAP93044.1| threonyl-tRNA synthetase [Vibrio splendidus 12B01]
          Length = 147

 Score =  182 bits (462), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 61/137 (44%), Positives = 83/137 (60%)

Query: 508 AFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEY 567
           A YV   +E+  PVMIHRA+ GS+ERFIGI+IE + G  P WL+P QAIV  IT    EY
Sbjct: 1   ATYVGEDNERHTPVMIHRAILGSLERFIGILIEEYAGFFPTWLAPEQAIVMGITDKQSEY 60

Query: 568 AQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGST 627
            QEIA  L+     ++ D RNE I +KIREH++K++P +++CGD+E     I +R     
Sbjct: 61  VQEIAKKLQKSGFRVKADLRNEKIGFKIREHTLKRVPFMLVCGDQEMEAGEIAVRTRKGK 120

Query: 628 TTQKVSLLDAIPILTKE 644
              K  + D I  +  E
Sbjct: 121 DLGKFKVDDFISYIQAE 137


>gi|319407251|emb|CBI80890.1| Prolyl-tRNA synthetase [Bartonella sp. 1-1C]
          Length = 441

 Score =  182 bits (461), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 73/448 (16%), Positives = 150/448 (33%), Gaps = 44/448 (9%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  L       +E+E   HR + R   +    +  SG+  W   G K+   +   +R +
Sbjct: 4   SQYFLPILKESPKEAEVISHRFMLRAGMVR---QQTSGIYSWLPLGKKVLDKICKIIREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +     EI  P +    LW++S  ++ Y   M  ++   D     R     P N     
Sbjct: 61  QERAGALEILMPTIQSADLWRESERYNDYGLEMLRIRDRQD-----RDLLYGPTNEEMVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +F   ++SY++LP+ L      +R+E      G+MR R F   DA+ F           
Sbjct: 116 DIFRSYVRSYKDLPLNLYHIQWKFRDEIRPRF-GVMRAREFLMKDAYSFDLDYASAKISY 174

Query: 406 -KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIM------KGVLDTIKNS 458
            ++    +  +   G + I ++  T P     S      A+         K  L+    S
Sbjct: 175 NRMFVAYLRTFSRIGLKAIPMRADTGPIGGELSHEFIILAKTGESSIFCDKRFLEFTVPS 234

Query: 459 -----SQDRINTGVLLGEGAFYGPKFEYI-------LKDAIG---RDWQCGTI-QVDFNL 502
                +   +   ++    + Y    E         + D+     R  + G I       
Sbjct: 235 VSIDFTDKDVLADIVRQWTSLYAATEEMHNEEEWSKVPDSNKLSARGIEVGHIFHFGTKY 294

Query: 503 PSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN----LPLWLSPIQAIV 557
            +   A  +    ++     +    +G    R +  +IE+         P  ++P    +
Sbjct: 295 SAPMGAKVMGQDGKEH---FVSMGSYGIGPSRLVAAVIESSHDEHGIIWPKSIAPFDFGI 351

Query: 558 TTITSSAVEY---AQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
             +     +     + +   L         D   E    K     +  +P+ +I G K A
Sbjct: 352 INMKPDDEKCSYICETLYQELIRRGFDPLLDDTGERPGSKFATMDLIGLPVQMIIGPKNA 411

Query: 615 SERSIGIRRFGSTTTQKVSLLDAIPILT 642
           ++  + I+   +   + +++   +   +
Sbjct: 412 TQNEVEIKDRKTGLREVLTVEAVLNRFS 439


>gi|30260563|ref|NP_842940.1| prolyl-tRNA synthetase [Bacillus anthracis str. Ames]
 gi|47525667|ref|YP_017016.1| prolyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49183410|ref|YP_026662.1| prolyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|227813066|ref|YP_002813075.1| prolyl-tRNA synthetase [Bacillus anthracis str. CDC 684]
 gi|254686784|ref|ZP_05150642.1| prolyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066]
 gi|254738991|ref|ZP_05196693.1| prolyl-tRNA synthetase [Bacillus anthracis str. Western North
           America USA6153]
 gi|254744578|ref|ZP_05202257.1| prolyl-tRNA synthetase [Bacillus anthracis str. Kruger B]
 gi|254756164|ref|ZP_05208193.1| prolyl-tRNA synthetase [Bacillus anthracis str. Vollum]
 gi|254761982|ref|ZP_05213831.1| prolyl-tRNA synthetase [Bacillus anthracis str. Australia 94]
 gi|81584321|sp|Q81Z76|SYP2_BACAN RecName: Full=Prolyl-tRNA synthetase 2; AltName: Full=Proline--tRNA
           ligase 2; Short=ProRS 2
 gi|30253931|gb|AAP24426.1| proline--tRNA ligase [Bacillus anthracis str. Ames]
 gi|47500815|gb|AAT29491.1| prolyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49177337|gb|AAT52713.1| prolyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|227002361|gb|ACP12104.1| proline--tRNA ligase [Bacillus anthracis str. CDC 684]
          Length = 508

 Score =  182 bits (461), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 83/429 (19%), Positives = 169/429 (39%), Gaps = 60/429 (13%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           E  Q +  +EE   + +  + ++ +L   +    G +     G+ +++ +   M  K+K 
Sbjct: 4   EQVQAITKMEEDFAQWYTDIVKKAELVDYSSVK-GCMILRPYGYALWENMQKVMDEKLKA 62

Query: 290 -DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
             +E +  P  + + L  ++  H + +   +  V    D     R   ++P +       
Sbjct: 63  TGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGDEKLAER-LCVRPTSETLFCEH 121

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH-VFCTKEQMFNECLK 406
           F+  ++SY +LP    ++ SV R E   +    +R   F   + H +  T E+   E L 
Sbjct: 122 FSKIVQSYNDLPKLYNQWCSVVRWEK--TTRPFLRTTEFLWQEGHTIHETAEESQAETLN 179

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           I NL  S  +D+    ++    T  EK  G+ A +                         
Sbjct: 180 ILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKATY------------------------- 214

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
                        E ++ D  G+  Q GT      N    F+  +++ + +  +   +H+
Sbjct: 215 -----------TIESLMHD--GKALQTGTSHNFGTNFSEAFDIKFLDRNGKWQY---VHQ 258

Query: 526 AVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSH 578
             +G   R IG +I    +N    +P  ++P+Q ++  I       +  A E+   ++  
Sbjct: 259 TSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLAKATELQGHIQKV 318

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS---LL 635
              ++ D  N+T  +K  E+ +K IPI +  G K+  +  + + R  +   + +S   L 
Sbjct: 319 -ARVKIDASNKTPGWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEKEFISMDQLE 377

Query: 636 DAIPILTKE 644
           + IP L +E
Sbjct: 378 ERIPALLEE 386


>gi|154503764|ref|ZP_02040824.1| hypothetical protein RUMGNA_01588 [Ruminococcus gnavus ATCC 29149]
 gi|153795864|gb|EDN78284.1| hypothetical protein RUMGNA_01588 [Ruminococcus gnavus ATCC 29149]
          Length = 521

 Score =  182 bits (461), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 76/438 (17%), Positives = 163/438 (37%), Gaps = 54/438 (12%)

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYM 283
               +++L + +   E    + +  + RE  L   +    G + +   G+ I++ + + +
Sbjct: 41  IMAKEKKLVESITAREVDFAQWYTDVVREAKLCDYSGVK-GCLNYLPNGYAIWENIQANL 99

Query: 284 RRKIKDDYEE-INTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
            ++ K+   E +  P ++ ++L  ++  H + +   +  V          R F ++P + 
Sbjct: 100 DKRFKETGVENVYLPVLIPENLLQKEKDHIEGFAPEVAWVTHGGMEELQER-FCIRPTSE 158

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
                +++  ++SYR+LP    ++ SV R E   +    +R R F   + H        +
Sbjct: 159 TLFCDLWSKTVQSYRDLPKVWNQWCSVLRWEK--TTRPFLRSREFLWQEGHTIHAT---Y 213

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E  +   L+  +YK F                                V D +      
Sbjct: 214 EEAEERTLLMRDVYKSF--------------------------------VEDDLAIPLVT 241

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
              T      GA      E ++ D  G+  Q GT     N  +  +A+ ++   ++    
Sbjct: 242 GRKTPSEKFAGAQDTYTIEALMHD--GKALQSGTSHFFGNAFA--DAYGISYSDKENKLH 297

Query: 522 MIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIANL 574
            ++   +G   R IG +I    ++    LP  ++P+Q  V  I       ++ A E+   
Sbjct: 298 SVYETSWGLSTRIIGAIIMVHGDDSGLVLPPHIAPVQTRVIPIAQHKEGVLDKANELLAA 357

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           LK+       D   ++  +K  E  +  IP  I  G K+     + + R  +     V++
Sbjct: 358 LKAAGYRASIDDSEKSPGWKFSEQEMVGIPTRIEIGPKDIENGQVVVVRRDTREKIVVAM 417

Query: 635 LDAIPILTK--ESLPPDC 650
            +    L++  E++  D 
Sbjct: 418 DELTEKLSEILETIQKDM 435


>gi|262277283|ref|ZP_06055076.1| prolyl-tRNA synthetase [alpha proteobacterium HIMB114]
 gi|262224386|gb|EEY74845.1| prolyl-tRNA synthetase [alpha proteobacterium HIMB114]
          Length = 442

 Score =  181 bits (460), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 83/436 (19%), Positives = 158/436 (36%), Gaps = 40/436 (9%)

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEI 294
               E++ + H+ + R   +    +  SG+  W   G+K+ + +   +R +       E+
Sbjct: 13  ENPSEAKIKSHQLMLRAGMIR---QSASGIYSWLPMGFKVLKNIEQIVREEQNKAGAIEL 69

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
             P +    +W++SG +D Y   M  +       +  R     P N      +F   +KS
Sbjct: 70  LMPTIQSADIWKESGRYDDYGKEMLRISD-----RHERDLLYGPTNEELITQIFRDNIKS 124

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIIS 413
           Y+ LP+ L      +R+E      G+MR R F   D + F   +        K+    + 
Sbjct: 125 YKNLPLMLYHIQWKFRDEIRPRF-GVMRCREFLMKDTYSFDVDKATAEFSYKKMFLSYLK 183

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDAL-----WDDAENIM-KGVLDTIKNS---SQDRIN 464
            ++ F    I +K  T P     S          ++E  + K +LD   N    S+  IN
Sbjct: 184 TFQKFELNAIPMKAETGPIGGDLSHEFIILADTGESEVFLDKNLLDIDVNEVDYSEKNIN 243

Query: 465 TGVLLGEGAFYGPKFEYI----LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS-----HS 515
             ++     FY    E       ++ + ++ Q  T  ++      F   Y  S     ++
Sbjct: 244 -EIIERFSKFYSATDEKHDVNEFENNVSKENQLRTKGIEIGHIFYFGDKYSKSMKALVNN 302

Query: 516 EKCHPVMIHRAVFGS-IERFIGIMIE----NFKGNLPLWLSPIQAIVTT---ITSSAVEY 567
           ++   +      +G  + R    +IE          P  ++P +  +         A + 
Sbjct: 303 KEGKNINPQMGSYGIGVSRLPAAIIEAKYNGTFMKWPKTVTPFKVAIINLGKNGDEADQK 362

Query: 568 AQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGST 627
           + EI   L + +L    D  +E  + K +   +  IP  II G K   +     +  G  
Sbjct: 363 SNEIYQNLINANLDPILDDTSENPSSKFKNFDLIGIPYQIIIGSK-LKKDEFEFKEIGEE 421

Query: 628 TTQKVSLLDAIPILTK 643
               +S  + I  L +
Sbjct: 422 KL-ILSKEEVINRLKE 436


>gi|229015779|ref|ZP_04172758.1| Prolyl-tRNA synthetase 2 [Bacillus cereus AH1273]
 gi|229021987|ref|ZP_04178545.1| Prolyl-tRNA synthetase 2 [Bacillus cereus AH1272]
 gi|228739314|gb|EEL89752.1| Prolyl-tRNA synthetase 2 [Bacillus cereus AH1272]
 gi|228745536|gb|EEL95559.1| Prolyl-tRNA synthetase 2 [Bacillus cereus AH1273]
          Length = 476

 Score =  181 bits (460), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 82/429 (19%), Positives = 170/429 (39%), Gaps = 60/429 (13%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           E  Q +  +EE   + +  + ++ +L   +    G +     G+ +++ +   M  K+K+
Sbjct: 4   EQVQAITKMEEDFAQWYTDIVKKAELVDYSSVK-GCMILRPYGYALWENMQKVMDEKLKE 62

Query: 290 -DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
             +E +  P  + + L  ++  H + +   +  V    D     R   ++P +       
Sbjct: 63  SGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGDEKLAER-LCIRPTSETLFCEH 121

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH-VFCTKEQMFNECLK 406
           F+  ++SY +LP    ++ SV R E   +    +R   F   + H +  T E+   E L 
Sbjct: 122 FSKIVQSYNDLPKLYNQWCSVVRWEK--TTRPFLRTTEFLWQEGHTIHETAEESQAETLN 179

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           I NL  S  +D+    ++    T  EK  G+ A +                         
Sbjct: 180 ILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKATY------------------------- 214

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
                        E ++ D  G+  Q GT      N    F+  +++ + +  +   +H+
Sbjct: 215 -----------TIESLMHD--GKALQTGTSHNFGTNFSEAFDIKFLDRNGKWQY---VHQ 258

Query: 526 AVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSH 578
             +G   R IG +I    +N    +P  ++P+Q ++  I       +E A E+   ++  
Sbjct: 259 TSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLEKATELQGRIQKV 318

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS---LL 635
              ++ D  N+T  +K  E+ +K +PI +  G K+  +  + + R  +   + +S   L 
Sbjct: 319 -ARVKIDASNKTPGWKFNEYEMKGVPIRLEVGPKDIEKNQVVLVRRDTKEKEFISMDQLE 377

Query: 636 DAIPILTKE 644
           + I  L +E
Sbjct: 378 ERIRSLLEE 386


>gi|302894055|ref|XP_003045908.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256726835|gb|EEU40195.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 555

 Score =  181 bits (460), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 76/420 (18%), Positives = 153/420 (36%), Gaps = 57/420 (13%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++  + ++++  + ++     + SG          I+  +  + +  I++   +E N P 
Sbjct: 56  DNFPQWYQEVVLKAEMVEYYTEISGFFVLRPLAMHIWNEIRKWFQAHIEEMGVDETNFPM 115

Query: 299 VLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            L     + +  H + +   +  V  A D   ++   A++P +       ++  ++S+R+
Sbjct: 116 FLSSKSLEKEKDHVEGFAPELAWVTKAGDKDLEV-PVAVRPTSEAVMYPYYSKWIRSHRD 174

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYK 416
           LP+RL ++ SV R E        +R R F   + H    T+E    E L+I  L   +Y+
Sbjct: 175 LPLRLNQWNSVVRWEAK-QTTPFLRTREFLWQEGHTAHLTEELAGVEVLEILELYAGVYE 233

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
                 ++    T  EK  G                                     +Y 
Sbjct: 234 KLLAVPVVRGRKTENEKFAGG------------------------------------YYT 257

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
              E  +  + GR  Q  T        S+     V     K   + + +  +G   R IG
Sbjct: 258 TTVEGYIP-SNGRGIQGATSHALGQNFSKMFDITVEDPQNKGSHLHVWQNSWGLSTRVIG 316

Query: 537 IMIENFKGNLPLWLSP----IQAIVTTIT----------SSAVEYAQEIANLLKSHHLSI 582
           +M+     +  L L P     QAI+  +               E   EI   LK   + +
Sbjct: 317 VMVMIHGDDKGLVLPPRVAKTQAIIIPVGINKNTTPEARKQHEEQVDEIRATLKKAGVRV 376

Query: 583 ETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           E+D+R+  T  +K  +  +K +P+ +  G K+A++  +   R  +     + + D    +
Sbjct: 377 ESDWRDGYTPAWKFNDWELKGVPVRLEFGPKDAAKEVVSYARRDTGEKGTIPIADIATKI 436


>gi|213026905|ref|ZP_03341352.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 168

 Score =  181 bits (460), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 96/166 (57%), Positives = 122/166 (73%), Gaps = 7/166 (4%)

Query: 327 TIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
           T  + R + +KPMNCPGHV +FN GLKSYR+LP+R+AEFGS +RNEPSG+LHGLMRVRGF
Sbjct: 10  TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGLMRVRGF 69

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
           TQDDAH+FCT+EQ+ +E      ++  +Y  FGFEKI+VKLSTRP+KR+GSD +WD AE 
Sbjct: 70  TQDDAHIFCTEEQI-HEVNACIRMVYDMYSTFGFEKIVVKLSTRPDKRIGSDEMWDRAEA 128

Query: 447 IMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
            +   L+      ++ I     LGEGAFYGPK E+ L D + R WQ
Sbjct: 129 DLAVALE------ENNIPFEYQLGEGAFYGPKIEFTLYDCLDRAWQ 168


>gi|307353929|ref|YP_003894980.1| prolyl-tRNA synthetase [Methanoplanus petrolearius DSM 11571]
 gi|307157162|gb|ADN36542.1| prolyl-tRNA synthetase [Methanoplanus petrolearius DSM 11571]
          Length = 477

 Score =  181 bits (460), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 72/405 (17%), Positives = 149/405 (36%), Gaps = 58/405 (14%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQ 298
           + +    + ++    ++  +     G+  W   G+ I +     +R  +  D+EE   P 
Sbjct: 11  KNNFSEWYNEILWRAEIMDVRYPVKGLYVWFPHGFAIRKATYGILRELLDRDHEETLFPL 70

Query: 299 VLDQ-HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           ++ +    +++ H   +   ++ V     +  D+   AL+P +      ++   ++S+ +
Sbjct: 71  LIPEYEFMKEAEHIKGFEEEVYWVTNGGLSKLDV-PLALRPTSETAIYPMYALWVRSHAD 129

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFT-QDDAHVFC-TKEQMFNECLKIHNLIISIY 415
           LP++L +  + +R E       L+R+R  T   +AH    T E+   +      L    Y
Sbjct: 130 LPIKLYQIVNTFRYETK-HTRPLIRLREITSFKEAHTVHATWEEAKEQVEDAIALYKEFY 188

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           +      IM K              WD                             GA Y
Sbjct: 189 ERLCVPVIMSKRPD-----------WDKF--------------------------PGADY 211

Query: 476 GPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
               + ++ D  GR  Q GT   +  N    F   Y + + E+ +     +  +G  ER 
Sbjct: 212 TIAADAVMPD--GRTLQVGTAHHLGDNFAKTFEICYEDENGEQQYAF---QTCYGISERC 266

Query: 535 IGIMI----ENFKGNLPLWLSPIQAIVTTIT-----SSAVEYAQEIANLLKSHHLSIETD 585
           I  +I    ++    LP  ++P+Q ++  I          + A++I   +K+  L ++ D
Sbjct: 267 IAALISIHGDDKGLVLPPEIAPVQVVIVPIIMKKMAEEVTQAAKDIEAEMKAAGLRVKID 326

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSI-GIRRFGSTTT 629
            R      K     ++  P+ +  G ++     +    RFG  T+
Sbjct: 327 DRPLRPGAKYYHWEMRGTPLRLEIGPRDLENGVVMAADRFGEKTS 371


>gi|330814001|ref|YP_004358240.1| prolyl-tRNA synthetase Bacterial type [Candidatus Pelagibacter sp.
           IMCC9063]
 gi|327487096|gb|AEA81501.1| prolyl-tRNA synthetase Bacterial type [Candidatus Pelagibacter sp.
           IMCC9063]
          Length = 441

 Score =  181 bits (460), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 90/435 (20%), Positives = 160/435 (36%), Gaps = 43/435 (9%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTP 297
            ++  + H+ + R   +    +  SG+  W   G+K+ + + S +R  + K   +E+  P
Sbjct: 16  SDATIKSHQLMLRSGMIR---QSASGIYSWLPLGFKVLKKIESIVRDEQNKAGAQEMLMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW++SG +D Y   M  ++   D     R     P N      +F   +K+Y+ 
Sbjct: 73  TIQSADLWKESGRYDGYGLEMLRIRDRQD-----RELLYGPTNEELITQIFRDNVKTYKS 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT-KEQMFNECLKIHNLIISIYK 416
           LP+ L      +R+E      G+MR R F   D++ F   KE       K+    +  ++
Sbjct: 128 LPLILYHIQWKFRDEIRPRF-GIMRCREFLMKDSYSFDENKEGAIISYNKMFCAYLKTFE 186

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALW---DDAENIM---KGVLDTIKNSSQDRINTGVLLG 470
             G   I +   T P     S       D  E+ +   K +LD +K S     +  +   
Sbjct: 187 RLGLRAIPMAADTGPIGGDLSHEFIILADTGESQIFTSKKILD-LKISDFKNDSESLAKM 245

Query: 471 EGAF---YGPKFE----------YILKDAI-GRDWQCGTIQVDFNLPSRFNAFYVNSHSE 516
             ++   Y    E             KD +  R  + G I    +  S+     VNS   
Sbjct: 246 VKSYTDIYSATDEKFNQSDFDKSVEKKDQLVTRGIEVGHIFYFGDKYSKPMKALVNSSEG 305

Query: 517 KCHPVMIHRAVFGSIERFIGIMIE----NFKGNLPLWLSPIQAIVTTITSSAVEYAQE-- 570
           K   + +     G   R  G +IE    +     P  ++P    V  +     E  ++  
Sbjct: 306 KNITIEMGSYGIGVS-RLAGAIIEANYKDNVMKWPASVTPFHVAVIYLGKKNDETLKKKT 364

Query: 571 --IANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
             +   L ++   +  D  +E+   K +   +  IP  II G K  S      +  G   
Sbjct: 365 SDVYEKLLNNSFEVLLDDTDESPASKFKNFDLIGIPYQIIIGAK-QSGDEFEFKELGE-E 422

Query: 629 TQKVSLLDAIPILTK 643
            + ++L   I  L K
Sbjct: 423 KEIINLDIIINKLKK 437


>gi|210623133|ref|ZP_03293599.1| hypothetical protein CLOHIR_01549 [Clostridium hiranonis DSM 13275]
 gi|210153810|gb|EEA84816.1| hypothetical protein CLOHIR_01549 [Clostridium hiranonis DSM 13275]
          Length = 482

 Score =  181 bits (459), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 79/417 (18%), Positives = 156/417 (37%), Gaps = 57/417 (13%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
           +E    + +  +  + DL   A     ++     G+ +++ +  +   KIK   ++    
Sbjct: 15  MEVDFAQWYTDVVTKTDLVDYAPVKGFMVI-KPYGYALWEKIQEFFDAKIKATGHKNCYF 73

Query: 297 PQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P ++ + L  +++ H + +   +  V    +   + R   ++P +      ++   LKSY
Sbjct: 74  PLLIPESLLTKEAEHVEGFAPEVAWVTQGGNKTLEER-LCVRPTSETIICTMYAKWLKSY 132

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISI 414
           RELP    ++ SV R E   +    +R   F   + H    T E+   E L I  +   +
Sbjct: 133 RELPYLYNQWCSVVRWEK--TTRPFLRTSEFLWQEGHTLHETYEEAEKETLDILQMYKEV 190

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            +D     ++    +  EK  G +  +                                 
Sbjct: 191 CEDLLAMPVIDGQKSESEKFAGGERTY--------------------------------- 217

Query: 475 YGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
                E ++ D  G+  Q GT   +  +    F+  + +      HP   +   +G   R
Sbjct: 218 ---TIEAMMHD--GKALQSGTSHFLGQHFTKAFDITFADREGGMSHP---YHTSWGISTR 269

Query: 534 FIGIMI----ENFKGNLPLWLSPIQAIVTTITS---SAVEYAQEIANLLKSHHLSIETDF 586
            IG +I    +N    LP  ++P Q ++  I +     +E   E+   LK     +E D 
Sbjct: 270 LIGGLIMTHSDNRGLVLPPRIAPTQVMIIPIAANKGGVMEKVDELYAALKEKGARVEVDD 329

Query: 587 R-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           R N +  YK+ +  +K IP+ I  G K+       + R  +   + VSL + +  +T
Sbjct: 330 RPNYSTGYKLNDSEMKGIPVRIEIGPKDIENNQAMVFRRDTLEKEAVSLDNLVEYVT 386


>gi|300119016|ref|ZP_07056727.1| prolyl-tRNA synthetase [Bacillus cereus SJ1]
 gi|298723632|gb|EFI64363.1| prolyl-tRNA synthetase [Bacillus cereus SJ1]
          Length = 476

 Score =  181 bits (459), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 83/429 (19%), Positives = 169/429 (39%), Gaps = 60/429 (13%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           E  Q +  +EE   + +  + ++ +L   +    G +     G+ +++ +   M  K+K 
Sbjct: 4   EQVQAITKMEEDFAQWYTDIVKKAELVDYSSVK-GCMILRPYGYALWENMQKVMDEKLKA 62

Query: 290 -DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
             +E +  P  + + L  ++  H + +   +  V    D     R   ++P +       
Sbjct: 63  TGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGDEKLAER-LCVRPTSETLFCEH 121

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH-VFCTKEQMFNECLK 406
           F+  ++SY +LP    ++ SV R E   +    +R   F   + H +  T E+   E L 
Sbjct: 122 FSKIVQSYNDLPKLYNQWCSVVRWEK--TTRPFLRTTEFLWQEGHTIHETAEESQAETLN 179

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           I NL  S  +D+    ++    T  EK  G+ A +                         
Sbjct: 180 ILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKATY------------------------- 214

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
                        E ++ D  G+  Q GT      N    F+  +++ + +  +   +H+
Sbjct: 215 -----------TIESLMHD--GKALQTGTSHNFGTNFSEAFDIKFLDRNGKWQY---VHQ 258

Query: 526 AVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSH 578
             +G   R IG +I    +N    +P  ++P+Q ++  I       +  A E+   ++  
Sbjct: 259 TSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLAKATELQGHIQKV 318

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS---LL 635
              ++ D  N+T  +K  E+ +K IPI +  G K+  +  + + R  +   + +S   L 
Sbjct: 319 -ARVKIDASNKTPGWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEKEFISMDQLE 377

Query: 636 DAIPILTKE 644
           + IP L +E
Sbjct: 378 ERIPALLEE 386


>gi|229051703|ref|ZP_04195164.1| Prolyl-tRNA synthetase 2 [Bacillus cereus AH676]
 gi|228721660|gb|EEL73143.1| Prolyl-tRNA synthetase 2 [Bacillus cereus AH676]
          Length = 476

 Score =  181 bits (459), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 85/429 (19%), Positives = 169/429 (39%), Gaps = 60/429 (13%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           E  Q +  +EE   + +  + ++ +L   +    G +     G+ +++ +   M  K+K+
Sbjct: 4   EQVQAITKMEEDFAQWYTDIVKKAELVDYSSVK-GCMILRPYGYALWENMQKVMDEKLKE 62

Query: 290 -DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
             +E +  P  + + L  ++  H + +   +  V    D     R   ++P +       
Sbjct: 63  TGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGDEKLAER-LCVRPTSETLFCEH 121

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH-VFCTKEQMFNECLK 406
           F+  ++SY +LP    ++ SV R E   +    +R   F   + H +  T E+   E L 
Sbjct: 122 FSKIVQSYNDLPKLYNQWCSVVRWEK--TTRPFLRTTEFLWQEGHTIHETAEESQAETLN 179

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           I NL  S  +D+    ++    T  EK  G+ A +                         
Sbjct: 180 ILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKATY------------------------- 214

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
                        E ++ D  G+  Q GT      N    F+  +++ + +  +   +H+
Sbjct: 215 -----------TIESLMHD--GKALQTGTSHNFGTNFSEAFDIKFLDRNGKWQY---VHQ 258

Query: 526 AVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHL- 580
             +G   R IG +I    +N    +P  ++P+Q ++  I     E     A  L++H   
Sbjct: 259 TSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQVVIVPIAQ-HKEGVLAKATELQAHIQK 317

Query: 581 --SIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS---LL 635
              ++ D  N+T  +K  E+ +K IPI +  G K+  +  + + R  +   + V    L 
Sbjct: 318 VARVKIDASNKTPGWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEKEFVPMDQLE 377

Query: 636 DAIPILTKE 644
           + IP L +E
Sbjct: 378 ERIPALLEE 386


>gi|206968558|ref|ZP_03229514.1| prolyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|206737478|gb|EDZ54625.1| prolyl-tRNA synthetase [Bacillus cereus AH1134]
          Length = 476

 Score =  181 bits (459), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 85/429 (19%), Positives = 170/429 (39%), Gaps = 60/429 (13%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           E  Q +  +EE   + +  + ++ +L   +    G +     G+ +++ +   M  K+K+
Sbjct: 4   EQVQAITKMEEDFAQWYTDIVKKAELVDYSSIK-GCMILRPYGYALWENMQKVMDEKLKE 62

Query: 290 -DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
             +E +  P  + + L  ++  H + +   +  V    D     R   ++P +       
Sbjct: 63  TGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGDEKLAER-LCVRPTSETLFCEH 121

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH-VFCTKEQMFNECLK 406
           F+  ++SY +LP    ++ SV R E   +    +R   F   + H +  T E+   E L 
Sbjct: 122 FSKIVQSYNDLPKLYNQWCSVVRWEK--TTRPFLRTTEFLWQEGHTIHETAEESQAETLN 179

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           I NL +S  +D+    ++    T  EK  G+ A +                         
Sbjct: 180 ILNLYVSFCEDYLAIPVIKGQKTEKEKFAGAKATY------------------------- 214

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
                        E ++ D  G+  Q GT      N    F+  +++ + +  +   +H+
Sbjct: 215 -----------TIESLMHD--GKALQTGTSHNFGTNFSEAFDIKFLDRNGKWQY---VHQ 258

Query: 526 AVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHL- 580
             +G   R IG +I    +N    +P  ++P+Q ++  I     E     A  L++H   
Sbjct: 259 TSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQVVIVPIAQ-HKEGVLAKATELQAHIQK 317

Query: 581 --SIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS---LL 635
              ++ D  N+T  +K  E+ +K IPI +  G K+  +  + + R  +   + V    L 
Sbjct: 318 VARVKIDASNKTPGWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEKEFVPMDQLE 377

Query: 636 DAIPILTKE 644
           + IP L +E
Sbjct: 378 ERIPALLEE 386


>gi|306821412|ref|ZP_07455017.1| proline--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
 gi|304550534|gb|EFM38520.1| proline--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
          Length = 482

 Score =  181 bits (459), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 77/422 (18%), Positives = 162/422 (38%), Gaps = 55/422 (13%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
           N ++E  + +  +E+   + +  + R+ D+   +     ++     G+ I++ + SY+ +
Sbjct: 4   NKKEEFVKDITNMEDDFAQWYTDVIRKTDMVDYSPVKGFMVI-KPYGFAIWENIQSYLDK 62

Query: 286 KIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPG 343
           + KD  ++    P ++ + L  ++  H + +   +  V          R   ++P +   
Sbjct: 63  RFKDTGHKNCYFPLLIPESLLNKEKEHVEGFAPEVAWVTHGGQEELGER-LCVRPTSETI 121

Query: 344 HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE 403
             ++++  L++YRELP    ++ SV R E   +    +R   F   + H     E    E
Sbjct: 122 ICSMYSKWLRTYRELPYLYNQWCSVVRWEK--TTRPFLRTSEFLWQEGHTLHETEAEAQE 179

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
                  I +                            + AE I+              I
Sbjct: 180 ETLQMLSIYT----------------------------ELAEKILA-------IPVVTGI 204

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVM 522
            +      GA      E ++ D  G+  Q GT   +  +    F+  Y +   +  +P  
Sbjct: 205 KSESEKFAGAHATYTIEAMMHD--GKALQSGTSHNLGQHFTKAFDITYQSRDGKLENP-- 260

Query: 523 IHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTI---TSSAVEYAQEIANLL 575
            +   +G   R IG +I     N    LP  ++PIQ ++  I       ++ A EI + L
Sbjct: 261 -YHTSWGVSTRLIGAIIMVHGDNRGLVLPPEIAPIQVVIIPIQQQKEGVLDKANEIYSSL 319

Query: 576 KSHHLSIETDFRN-ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           K+  + +E D  +  +  +K  E+ +K +P+ I  G ++     + I R  +    ++S+
Sbjct: 320 KNLGIRVELDDDSKNSTGWKFNEYEMKGVPLRIEIGPRDIQNNIVSISRRDTLEKDQISI 379

Query: 635 LD 636
            D
Sbjct: 380 DD 381


>gi|196040211|ref|ZP_03107513.1| proline--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|229089515|ref|ZP_04220784.1| Prolyl-tRNA synthetase 2 [Bacillus cereus Rock3-42]
 gi|196029066|gb|EDX67671.1| proline--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|228693822|gb|EEL47516.1| Prolyl-tRNA synthetase 2 [Bacillus cereus Rock3-42]
          Length = 476

 Score =  181 bits (459), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 83/429 (19%), Positives = 169/429 (39%), Gaps = 60/429 (13%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           E  Q +  +EE   + +  + ++ +L   +    G +     G+ +++ +   M  K+K 
Sbjct: 4   EQVQAITKMEEDFAQWYTDIVKKAELVDYSSVK-GCMILRPYGYALWENMQKVMDEKLKA 62

Query: 290 -DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
             +E +  P  + + L  ++  H + +   +  V    D     R   ++P +       
Sbjct: 63  TGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGDEKLAER-LCVRPTSETLFCEH 121

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH-VFCTKEQMFNECLK 406
           F+  ++SY +LP    ++ SV R E   +    +R   F   + H +  T E+   E L 
Sbjct: 122 FSKIVQSYNDLPKLYNQWCSVVRWEK--TTRPFLRTTEFLWQEGHTIHETAEESQAETLN 179

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           I NL  S  +D+    ++    T  EK  G+ A +                         
Sbjct: 180 ILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKATY------------------------- 214

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
                        E ++ D  G+  Q GT      N    F+  +++ + +  +   +H+
Sbjct: 215 -----------TIESLMHD--GKALQTGTSHNFGTNFSEAFDIKFLDRNGKWQY---VHQ 258

Query: 526 AVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSH 578
             +G   R IG +I    +N    +P  ++P+Q ++  I       +  A E+   ++  
Sbjct: 259 TSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLAKATELQGHIQKV 318

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS---LL 635
              ++ D  N+T  +K  E+ +K IPI +  G K+  +  + + R  +   + +S   L 
Sbjct: 319 -ARVKIDASNKTPGWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEKEFISMDQLE 377

Query: 636 DAIPILTKE 644
           + IP L +E
Sbjct: 378 ERIPALLEE 386


>gi|229108063|ref|ZP_04237688.1| Prolyl-tRNA synthetase 2 [Bacillus cereus Rock1-15]
 gi|229143182|ref|ZP_04271614.1| Prolyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST24]
 gi|296501219|ref|YP_003662919.1| prolyl-tRNA synthetase [Bacillus thuringiensis BMB171]
 gi|228640263|gb|EEK96661.1| Prolyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST24]
 gi|228675338|gb|EEL30557.1| Prolyl-tRNA synthetase 2 [Bacillus cereus Rock1-15]
 gi|296322271|gb|ADH05199.1| prolyl-tRNA synthetase [Bacillus thuringiensis BMB171]
          Length = 476

 Score =  181 bits (459), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 85/429 (19%), Positives = 169/429 (39%), Gaps = 60/429 (13%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           E  Q +  +EE   + +  + ++ +L   +    G +     G+ +++ +   M  K+K+
Sbjct: 4   EQVQAITKMEEDFAQWYTDIVKKAELVDYSSVK-GCMILRPYGYALWENMQKVMDEKLKE 62

Query: 290 -DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
             +E +  P  + + L  ++  H + +   +  V    D     R   ++P +       
Sbjct: 63  TGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGDEKLAER-LCVRPTSETLFCEH 121

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH-VFCTKEQMFNECLK 406
           F+  ++SY +LP    ++ SV R E   +    +R   F   + H +  T E+   E L 
Sbjct: 122 FSKIVQSYNDLPKLYNQWCSVVRWEK--TTRPFLRTTEFLWQEGHTIHETAEESQAETLN 179

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           I NL  S  +D+    ++    T  EK  G+ A +                         
Sbjct: 180 ILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKATY------------------------- 214

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
                        E ++ D  G+  Q GT      N    F+  +++ + +  +   +H+
Sbjct: 215 -----------TIESLMHD--GKALQTGTSHNFGTNFSEAFDIKFLDRNGKWQY---VHQ 258

Query: 526 AVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHL- 580
             +G   R IG +I    +N    +P  ++P+Q ++  I     E     A  L++H   
Sbjct: 259 TSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQVVIVPIAQ-HKEGVLAKATELQAHIQK 317

Query: 581 --SIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS---LL 635
              ++ D  N+T  +K  E+ +K IPI +  G K+  +  + + R  +   + V    L 
Sbjct: 318 VARVKIDASNKTPGWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEKEFVPMDQLE 377

Query: 636 DAIPILTKE 644
           + IP L +E
Sbjct: 378 ERIPALLEE 386


>gi|303244992|ref|ZP_07331315.1| prolyl-tRNA synthetase [Methanothermococcus okinawensis IH1]
 gi|302484644|gb|EFL47585.1| prolyl-tRNA synthetase [Methanothermococcus okinawensis IH1]
          Length = 471

 Score =  181 bits (459), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 77/420 (18%), Positives = 159/420 (37%), Gaps = 58/420 (13%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
             E+    +  +    +++ +     G   +   G+KI +     +R  + +  ++E   
Sbjct: 4   TVENFSEWYGNILERAEIYDLRYPIKGCGVYLPYGFKIRKYAFEIIRNMLDETGHDEALF 63

Query: 297 PQVLDQHLWQQSG-HWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P ++ + L  + G H   +   ++ V     T  D++  AL+P +      +    +K +
Sbjct: 64  PMLIPEDLLAKEGEHIKGFEDEVYWVTHGGKTPLDVK-LALRPTSETPIYYMMKLWIKVH 122

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRG-FTQDDAHV-FCTKEQMFNECLKIHNLIIS 413
            +LP+++ +  + +R E       L+R+R   T  +AH    TKE   N+  +  N+  +
Sbjct: 123 TDLPIKVYQVVNTFRYETK-HTRPLIRLREIMTFKEAHTAHATKEDAENQVKEAINIYKN 181

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
            + + G   I+ K              WD                             GA
Sbjct: 182 FFDELGIPTIISKRPE-----------WDKF--------------------------PGA 204

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
            Y   F+ I  D  G+  Q GT+  +  N    F   +  +   K +    ++  +G  +
Sbjct: 205 EYTMAFDTIFPD--GKTMQIGTVHNLGQNFAKTFELEFETADGGKDYA---YQTCYGISD 259

Query: 533 RFIGIMI----ENFKGNLPLWLSPIQAIVTTI-----TSSAVEYAQEIANLLKSHHLSIE 583
           R I  +I    +     LP  ++PIQ ++  +        A+  A+E+ N LK     ++
Sbjct: 260 RVIASIIALHGDEKGLILPPNVAPIQIVIIPLLFKGKEEIAMNKAEEVYNTLKEKGFRVK 319

Query: 584 TDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            D R+     K  +  +K  PI I  G ++   + I + R  +    +++  D +  +  
Sbjct: 320 LDDRDIRPGRKFNDWELKGAPIRIELGPRDIENKKITLFRRDTGEKFQINEDDLLDGINN 379


>gi|331092516|ref|ZP_08341338.1| prolyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_46FAA]
 gi|330400737|gb|EGG80340.1| prolyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_46FAA]
          Length = 480

 Score =  181 bits (459), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 78/438 (17%), Positives = 167/438 (38%), Gaps = 56/438 (12%)

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR 284
              +++  + +   +E   + +  +  + +L        G + +   G+ I++ + + + 
Sbjct: 1   MAKEKKFVEAITSRDEDFAQWYTDVVSKAELCDYTGVK-GCMVYLPNGYAIWEKIQADLD 59

Query: 285 RKIKDDYEE-INTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
           ++ K+   E +  P ++ ++L  ++  H + +   +  V    +     R   ++P +  
Sbjct: 60  KRFKETGVENVYLPMLIPENLLQKEKDHIEGFAPEVAWVTHGGNEPLQER-MCIRPTSET 118

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN 402
                ++  ++SYR+LP    ++ SV R E   +    +R R F   + H        + 
Sbjct: 119 LFCDHWSKTVQSYRDLPKIWNQWCSVLRWEK--TTRPFLRSREFLWQEGHTIHAT---YE 173

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
           E  +   L+  IYKDF                          E  +   L   K +  ++
Sbjct: 174 EAEERTILMQKIYKDF-------------------------IEESLAIPLVAGKKTDSEK 208

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPV 521
                    GA      E ++ D  G+  Q  T           F+  Y++ ++E     
Sbjct: 209 F-------AGAEDTYTVEALMHD--GKALQAATSHFFGSGFADAFDIKYLDKNNELHS-- 257

Query: 522 MIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIANL 574
            ++   +G   R IG +I    ++    LP  ++P+Q  V  I       +E A E+ N 
Sbjct: 258 -VYETSWGLTTRMIGAIIMVHGDDSGLVLPPRIAPVQTRVIPIAQHKEGVLEKATELMNT 316

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           LK+   ++  D  +++  +K  E  ++ IP  I  G K+     + + R  +     VSL
Sbjct: 317 LKAAGYAVNMDSSDKSPGWKFSEQEMQGIPTRIEIGPKDIENNQVVVVRRDTREKIVVSL 376

Query: 635 LDAIPILTK--ESLPPDC 650
            +    L +  E++  D 
Sbjct: 377 DEITTKLGEILETIQKDM 394


>gi|158319516|ref|YP_001512023.1| prolyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
 gi|166980096|sp|A8MLB3|SYP_ALKOO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|158139715|gb|ABW18027.1| prolyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
          Length = 480

 Score =  181 bits (459), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 80/429 (18%), Positives = 168/429 (39%), Gaps = 58/429 (13%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
            +++  + +  +E    + +  + ++ DL   +     ++     G+ I++ + +YM ++
Sbjct: 4   KEKQFVEEITPMEVDFAQWYTDVIKKTDLVDYSPVKGFMVI-KPYGYAIWENIQNYMDKR 62

Query: 287 IKD-DYEEINTPQVLDQHL-WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
            K+  ++    P ++ + L  +++ H + +   +  V    +     R   ++P +    
Sbjct: 63  FKETGHKNCYFPLLIPESLLKKEAEHVEGFAPEVAWVTHGGNEELAER-LCVRPTSETII 121

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNE 403
             +++  L SYR+LP    ++ SV R E S      +R   F   + H    T E+   E
Sbjct: 122 CEMYSKWLTSYRDLPFLYNQWCSVVRWEKS--TRPFLRTSEFLWQEGHTLHETYEEAQAE 179

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            L++ N+                               + AEN++   +   + S +++ 
Sbjct: 180 TLQMLNIYR-----------------------------ETAENLLAMPVVIGQKSEKEKF 210

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVM 522
                   GA+     E ++ D  G+  Q GT   +  +  + F+  Y + + E  HP  
Sbjct: 211 -------AGAYATYTMEALMHD--GKALQAGTSHNLGQHFTTAFDITYSDRNGELKHP-- 259

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWL----SPIQAIVTTI---TSSAVEYAQEIANLL 575
            +   +G   R IG +I     N  L L    +P Q ++  +       ++ A E+ + L
Sbjct: 260 -YHTSWGVSTRLIGGIIMVHGDNRGLVLPPGIAPTQVVIVPVASHKEGVLDKANELRDRL 318

Query: 576 KSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           K     +E D R+  +  +K  E  +K +PI I  G ++       + R        VSL
Sbjct: 319 KDK-FRVELDDRDNYSPGWKFNEWEMKGVPIRIEIGPRDIENNQAMLFRRDELEKDAVSL 377

Query: 635 LDAIPILTK 643
            D    + K
Sbjct: 378 DDLEEAVEK 386


>gi|30018647|ref|NP_830278.1| prolyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|229125889|ref|ZP_04254914.1| Prolyl-tRNA synthetase 2 [Bacillus cereus BDRD-Cer4]
 gi|81435975|sp|Q81IE9|SYP2_BACCR RecName: Full=Prolyl-tRNA synthetase 2; AltName: Full=Proline--tRNA
           ligase 2; Short=ProRS 2
 gi|29894188|gb|AAP07479.1| Prolyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|228657547|gb|EEL13360.1| Prolyl-tRNA synthetase 2 [Bacillus cereus BDRD-Cer4]
          Length = 476

 Score =  181 bits (458), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 86/429 (20%), Positives = 169/429 (39%), Gaps = 60/429 (13%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           E  Q +  +EE   + +  + ++ +L   +    G +     G+ +++ +   M  K+K+
Sbjct: 4   EQVQAITKMEEDFAQWYTDIVKKAELVDYSSVK-GCMILRPYGYALWENMQKVMDEKLKE 62

Query: 290 -DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
             +E +  P  + + L  ++  H + +   +  V    D     R   ++P +       
Sbjct: 63  TGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGDEKLAER-LCVRPTSETLFCEH 121

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH-VFCTKEQMFNECLK 406
           F+  ++SY +LP    ++ SV R E   +    +R   F   + H +  T E+   E L 
Sbjct: 122 FSKIVQSYNDLPKLYNQWCSVVRWEK--TTRPFLRTTEFLWQEGHTIHETAEESQAETLN 179

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           I NL  S  +D+    ++    T  EK  G+ A +                         
Sbjct: 180 ILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKATY------------------------- 214

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
                        E ++ D  G+  Q GT      N    F+  +++ + +  +   +H+
Sbjct: 215 -----------TIESLMHD--GKALQTGTSHNFGTNFSEAFDIKFLDRNGKWQY---VHQ 258

Query: 526 AVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHL- 580
             +G   R IG +I    +N    LP  ++P+Q ++  I     E     A  L++H   
Sbjct: 259 TSWGVSTRMIGGLIMVHSDNNGLVLPPKVAPVQVVIVPIAQ-HKEGVLAKATELQAHIQK 317

Query: 581 --SIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS---LL 635
              ++ D  N+T  +K  E+ +K IPI +  G K+  +  + + R  +   + V    L 
Sbjct: 318 VARVKIDASNKTPGWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEKEFVPMDQLE 377

Query: 636 DAIPILTKE 644
           + IP L +E
Sbjct: 378 ERIPALLEE 386


>gi|218235284|ref|YP_002365239.1| prolyl-tRNA synthetase [Bacillus cereus B4264]
 gi|229148794|ref|ZP_04277043.1| Prolyl-tRNA synthetase 2 [Bacillus cereus m1550]
 gi|218163241|gb|ACK63233.1| proline--tRNA ligase [Bacillus cereus B4264]
 gi|228634682|gb|EEK91262.1| Prolyl-tRNA synthetase 2 [Bacillus cereus m1550]
          Length = 476

 Score =  181 bits (458), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 85/429 (19%), Positives = 169/429 (39%), Gaps = 60/429 (13%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           E  Q +  +EE   + +  + ++ +L   +    G +     G+ +++ +   M  K+K+
Sbjct: 4   EQVQAITKMEEDFAQWYTDIVKKAELVDYSSVK-GCMILRPYGYALWENMQKVMDEKLKE 62

Query: 290 -DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
             +E +  P  + + L  ++  H + +   +  V    D     R   ++P +       
Sbjct: 63  TGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGDEKLAER-LCVRPTSETLFCEH 121

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH-VFCTKEQMFNECLK 406
           F+  ++SY +LP    ++ SV R E   +    +R   F   + H +  T E+   E L 
Sbjct: 122 FSKIVQSYNDLPKLYNQWCSVVRWEK--TTRPFLRTTEFLWQEGHTIHETAEESQAETLN 179

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           I NL  S  +D+    ++    T  EK  G+ A +                         
Sbjct: 180 ILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKATY------------------------- 214

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
                        E ++ D  G+  Q GT      N    F+  +++ + +  +   +H+
Sbjct: 215 -----------TIESLMHD--GKALQTGTSHNFGTNFSKAFDIKFLDRNGKWQY---VHQ 258

Query: 526 AVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHL- 580
             +G   R IG +I    +N    +P  ++P+Q ++  I     E     A  L++H   
Sbjct: 259 TSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQVVIVPIAQ-HKEGVLAKATELQAHIQK 317

Query: 581 --SIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS---LL 635
              ++ D  N+T  +K  E+ +K IPI +  G K+  +  + + R  +   + V    L 
Sbjct: 318 VARVKIDASNKTPGWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEKEFVPMDQLE 377

Query: 636 DAIPILTKE 644
           + IP L +E
Sbjct: 378 ERIPALLEE 386


>gi|149914370|ref|ZP_01902901.1| prolyl-tRNA synthetase [Roseobacter sp. AzwK-3b]
 gi|149811889|gb|EDM71722.1| prolyl-tRNA synthetase [Roseobacter sp. AzwK-3b]
          Length = 455

 Score =  181 bits (458), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 76/432 (17%), Positives = 146/432 (33%), Gaps = 45/432 (10%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLDQH 303
            HR + R      I +  +G+  W   G+K+ + L + +  +     +  +  P +    
Sbjct: 22  SHRLMLRAGM---IKQASAGIYSWLPMGFKVLRKLENIVHEEQIRARHVPMLMPTLQPAD 78

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SG +D Y   M  +K      +  R     P N      +F   + SY++LP+ L 
Sbjct: 79  LWRESGRYDDYGEEMLRIKD-----RQGRDLLYGPTNEELITDIFRSHVGSYKDLPLTLY 133

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKDFGFEK 422
                +R+E      G+MR R F   D + F  T+E   +   +     +  Y+  G + 
Sbjct: 134 HIQWKFRDEIRPRF-GVMRGREFFMKDGYNFDLTREDALHAYNRHLVSYLRTYERMGLQA 192

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNS----SQDRINTG-------VLLGE 471
           I ++  + P     +      AE    GV    + +        I+         V+   
Sbjct: 193 IPMRAESGPIGGDDTHEFLVLAETGESGVFYDSEITDLRFGDREIDYTSVEACQAVMEEF 252

Query: 472 GAFYGPKFEYILKDA-----------IGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCH 519
            + Y    +   +              GR  + G I            A   +       
Sbjct: 253 TSRYARTDDTHDESVFHDRVPEERRRSGRGIEVGQIFYFGTKYSEPMGATVQDRDGNT-- 310

Query: 520 PVMIHRAVFGS-IERFIGIMIE-NFKGNLPLWL---SPIQAIVTTITSSAVEYAQE---I 571
            V +H    G  + R IG +IE +      +W    +P  A +  + +   E       I
Sbjct: 311 -VPVHMGSHGIGVSRLIGAIIEASHDDRGIIWPEGVTPFHAGIVNLKTGDAEADAACEAI 369

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
              L +  L    D  ++    K     +  +P  I  G +      + +    +  +++
Sbjct: 370 YASLTALGLEPLYDDTDDRAGAKFATMDLIGLPWRITVGPRGLKNGVVELTSRRTGESEE 429

Query: 632 VSLLDAIPILTK 643
           +    A+  L +
Sbjct: 430 LPPEQAVEKLAR 441


>gi|254463517|ref|ZP_05076933.1| prolyl-tRNA synthetase [Rhodobacterales bacterium HTCC2083]
 gi|206680106|gb|EDZ44593.1| prolyl-tRNA synthetase [Rhodobacteraceae bacterium HTCC2083]
          Length = 445

 Score =  181 bits (458), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 75/439 (17%), Positives = 151/439 (34%), Gaps = 44/439 (10%)

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEI 294
               +++   HR + R      I +  +G+  W   G+K+ + + + +  + +   +  +
Sbjct: 13  ENPADAQIVSHRLMLRAGM---IKQSSAGIYSWLPMGFKVLRKIENIVHEEQQRAGHIPM 69

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
             P +    LW++SG +D+Y   M  +K   D     R     P N      +  + + S
Sbjct: 70  LMPTLQSADLWRKSGRYDAYGPEMLRIKDRHD-----REMLYGPTNEELITDMVANFVGS 124

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIIS 413
           Y+ LP+ L      +R+E      G+MR R F   D + F  TKE   +   +     + 
Sbjct: 125 YKSLPLTLYHVQWKFRDEVRPRF-GVMRGREFLMKDGYNFDLTKEDALHAYNRHLVTYLR 183

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
            Y+  G + I ++  + P     +      A+     V    + +     +  +   + A
Sbjct: 184 TYERMGLQAIPMRADSGPIGGDYTHEFLVLADTGESEVFYDSEITDLSFGDRTIDFDDKA 243

Query: 474 F-----------YGPKFEYILKDAIG----------RDWQCGTIQV-DFNLPSRFNAFYV 511
                       Y    E   + A            R  + G I         +  A   
Sbjct: 244 ACQSVMEEFTSRYARTDETHEEAAFNELPEERRRVARGIEVGQIFYFGTEYSEKMGAMVQ 303

Query: 512 NSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGNLPLWL---SPIQAIVTTITSSAVE 566
           N   ++   V +H    G  + R +G +IE +   N  +W    +P    +  +     E
Sbjct: 304 NEDGQR---VPLHMGSHGIGVSRLLGAIIEASHDDNGIIWPEGVTPFHCGIVNLKQGDDE 360

Query: 567 YAQE---IANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRR 623
                  + + L +  L    D R E    K     +  +P  I  G +      + +  
Sbjct: 361 ADAACDALYDSLTALGLDPLYDDRKERAGGKFATMDLIGLPWRITVGPRGLKNGVVEVTS 420

Query: 624 FGSTTTQKVSLLDAIPILT 642
             +  +++++   AI  + 
Sbjct: 421 RRTGESEEMTPELAIAKIA 439


>gi|218895513|ref|YP_002443924.1| prolyl-tRNA synthetase [Bacillus cereus G9842]
 gi|228899114|ref|ZP_04063386.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis IBL 4222]
 gi|218542506|gb|ACK94900.1| prolyl-tRNA synthetase [Bacillus cereus G9842]
 gi|228860555|gb|EEN04943.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis IBL 4222]
          Length = 476

 Score =  181 bits (458), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 83/429 (19%), Positives = 170/429 (39%), Gaps = 60/429 (13%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           E  Q +  +EE   + +  + ++ +L   +    G +     G+ +++ +   M  K+K+
Sbjct: 4   EQVQAITKMEEDFAQWYTDIVKKAELVDYSSVK-GCMILRPYGYALWENMQKVMDEKLKE 62

Query: 290 -DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
             +E +  P  + + L  ++  H + +   +  V    D     R   ++P +       
Sbjct: 63  TGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGDEKLAER-LCVRPTSETLFCEH 121

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH-VFCTKEQMFNECLK 406
           F+  ++SY +LP    ++ SV R E   +    +R   F   + H +  T E+   E L 
Sbjct: 122 FSKIVQSYNDLPKLYNQWCSVVRWEK--TTRPFLRTTEFLWQEGHTIHETAEESQAETLN 179

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           I NL  S  +D+    ++    T  EK  G+ A +                         
Sbjct: 180 ILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKATY------------------------- 214

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
                        E ++ D  G+  Q GT      N    F+  +++ + +  +   +H+
Sbjct: 215 -----------TIESLMHD--GKALQTGTSHNFGTNFSEAFDIKFLDRNGKWQY---VHQ 258

Query: 526 AVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSH 578
             +G   R IG +I    +N    +P  ++P+Q ++  I       +  A E+   ++  
Sbjct: 259 TSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLAKATELQGHIQKV 318

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS---LL 635
              ++ D  N+T  +K  E+ +K IPI +  G K+  +  + + R  +   + +S   L 
Sbjct: 319 -ARVKIDASNKTPGWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEKEFISMDQLE 377

Query: 636 DAIPILTKE 644
           + IP L +E
Sbjct: 378 ERIPALLEE 386


>gi|171691298|ref|XP_001910574.1| hypothetical protein [Podospora anserina S mat+]
 gi|170945597|emb|CAP71710.1| unnamed protein product [Podospora anserina S mat+]
          Length = 551

 Score =  181 bits (458), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 78/444 (17%), Positives = 162/444 (36%), Gaps = 59/444 (13%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
            + ++        E+    ++++ ++ ++     + SG          I+ T+  +   +
Sbjct: 40  KKDDIIGITAKKGENFSAWYQEVVQKAEMVEYYTEISGFFVMRPNTMYIWNTIRKWFNER 99

Query: 287 IKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           I+    EE N P  L      ++  H + +   +  V  A +   ++   A++P +    
Sbjct: 100 IEAAGVEECNFPMFLSSTSLQKEKDHVEGFAPELAWVTKAGEKDLEV-PVAVRPTSEAVM 158

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNE 403
              ++  ++S+R+LP++L ++ SV R E        +R R F   + H  F ++EQ   E
Sbjct: 159 YPYYSKWIRSHRDLPLKLNQWVSVVRWEAK-QTVPFLRAREFMWQEGHTAFVSEEQAGKE 217

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            L+I  L   IY+      ++    T  EK  G                           
Sbjct: 218 VLEILELYAGIYEQLLAVPVVRGKKTEAEKFAGG-------------------------- 251

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
                     +Y    E  +  + GR  Q  T        S+     V   + K   + +
Sbjct: 252 ----------YYTTTVEGYIP-SNGRGIQGATSHCLGQNFSKMFDITVEDPTNKGQKIHV 300

Query: 524 HRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTTIT----------SSAVEYAQ 569
            +  +G   R IG+M+     +  L L P     QAI+  +              ++   
Sbjct: 301 WQNSWGLSTRVIGVMVMIHGDDKGLVLPPRIAKTQAILIPVGLTAKTTPEDKEKHLDRMY 360

Query: 570 EIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
           E+  +LK   +  E D R   T  +K  +  +K +P+ +  G K+A++  +   R  +  
Sbjct: 361 ELLAILKKAGVRTEIDTREGYTPAWKFNDWEMKGVPVRLEFGPKDAAKDVVSFARRDTGE 420

Query: 629 TQKVSLLDAIPILTK--ESLPPDC 650
              + + +    + +  E++  D 
Sbjct: 421 KGTIPIGELTTKVPELLETIQQDM 444


>gi|58617074|ref|YP_196273.1| prolyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel]
 gi|81311371|sp|Q5FHL5|SYP_EHRRG RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|58416686|emb|CAI27799.1| Prolyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel]
          Length = 426

 Score =  181 bits (458), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 75/438 (17%), Positives = 152/438 (34%), Gaps = 37/438 (8%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +     H    R   +  +A   SG+  W   G K+ + + + ++ +
Sbjct: 4   SKYYIPTLKETPTDVSVTSHVYSLRSGLIRQVA---SGIYAWLPLGLKVLKNIENVIKEE 60

Query: 287 IK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P +    LWQ+SG ++ Y + M  +K  ++     R     P +     
Sbjct: 61  MNKSGILEVLMPLIQPASLWQESGRYNDYGSEMLRIKDRNN-----REMVFGPTHEEVVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    L SY+ LP+ L +    +R+E     +G+MR R F   DA+ F        E  
Sbjct: 116 DLLRTTLTSYKNLPLILYQVQWKFRDELRPR-YGIMRCREFLMKDAYSFDKDFNSAIESY 174

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
             +  + I I++  G   I VK  + P     S      A +    +       +    +
Sbjct: 175 NLMFKVYIQIFRRLGLTPIAVKADSGPIGGNLSHEFHILANSGESTLYYDQDIINLINND 234

Query: 465 TGVLLGEGAFYGPKFEYI-----------LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS 513
              +      Y    +             +K + G +   G I    +  S+      + 
Sbjct: 235 NIDIEKIKNTYTAADDLHNSETCPIPASNIKTSKGIE--IGHIFYLGDKYSKTMNAAFSQ 292

Query: 514 HSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGNLPLWLSPIQ------AIVTTITSSAV 565
           ++E     ++H   +G  + R +G +IE +   N  +W   I         V +      
Sbjct: 293 NNETQ---LLHMGCYGIGVSRLVGAIIEVSHDNNGIIWPEEIAPFKFSLVNVFSANKECR 349

Query: 566 EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
             ++ +   L S+   +  D   ++   K     +  +P  +I G        I +R+  
Sbjct: 350 NISENLYAKLDSND--VLYDDTEDSTGIKFSRMDLLGMPWQVIIGKTTIEHGLIEVRQRS 407

Query: 626 STTTQKVSLLDAIPILTK 643
           S  +  +S    +    K
Sbjct: 408 SKKSLLMSTEQFLNNFKK 425


>gi|49479045|ref|YP_034723.1| prolyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|81397340|sp|Q6HNZ7|SYP2_BACHK RecName: Full=Prolyl-tRNA synthetase 2; AltName: Full=Proline--tRNA
           ligase 2; Short=ProRS 2
 gi|49330601|gb|AAT61247.1| proline--tRNA ligase (prolyl-tRNA synthetase) [Bacillus
           thuringiensis serovar konkukian str. 97-27]
          Length = 476

 Score =  181 bits (458), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 83/429 (19%), Positives = 169/429 (39%), Gaps = 60/429 (13%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           E  Q +  +EE   + +  + ++ +L   +    G +     G+ +++ +   M  K+K 
Sbjct: 4   EQVQAITKMEEDFAQWYTDIVKKAELVDYSSVK-GCMILRPYGYALWENMQKVMDEKLKA 62

Query: 290 -DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
             +E +  P  + + L  ++  H + +   +  V    D     R   ++P +       
Sbjct: 63  TGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGDEKLAER-LCVRPTSETLFCEH 121

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH-VFCTKEQMFNECLK 406
           F+  ++SY +LP    ++ SV R E   +    +R   F   + H +  T E+   E L 
Sbjct: 122 FSKIVQSYNDLPKLYNQWCSVVRWEK--TTRPFLRTTEFLWQEGHTIHETAEESQAETLN 179

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           I NL  S  +D+    ++    T  EK  G+ A +                         
Sbjct: 180 ILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKATY------------------------- 214

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
                        E ++ D  G+  Q GT      N    F+  +++ + +  +   +H+
Sbjct: 215 -----------TIESLMHD--GKALQTGTSHNFGTNFSEAFDIKFLDRNGKWQY---VHQ 258

Query: 526 AVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSH 578
             +G   R IG +I    +N    +P  ++P+Q ++  I       +  A E+   ++  
Sbjct: 259 TSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLAKAIELQGHIQKV 318

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS---LL 635
              ++ D  N+T  +K  E+ +K IPI +  G K+  +  + + R  +   + +S   L 
Sbjct: 319 -ARVKIDASNKTPGWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEKEFISMDQLE 377

Query: 636 DAIPILTKE 644
           + IP L +E
Sbjct: 378 ERIPALLEE 386


>gi|124027657|ref|YP_001012977.1| bifunctional aminoacyl-tRNA synthetase [Hyperthermus butylicus DSM
           5456]
 gi|123978351|gb|ABM80632.1| Bifunctional aminoacyl-tRNA synthetase [Hyperthermus butylicus DSM
           5456]
          Length = 380

 Score =  181 bits (458), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 76/423 (17%), Positives = 149/423 (35%), Gaps = 61/423 (14%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRRKIK 288
                         R    +  E   +        G+  W   G+++ + +I  +R  + 
Sbjct: 1   MPGASRDRWRREFPRWFDWILEEAGFYDYGRYPVKGMGIWLPYGFQLRRRIIELVREVLD 60

Query: 289 D-DYEEINTPQVLDQHL-WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA 346
              +EEI  P ++ +HL  ++S H   +   ++ V        D++  AL+P +      
Sbjct: 61  STGHEEILMPLLIPEHLLRKESEHIRGFEGEVYWVTHGGHEPLDVK-LALRPTSETSITY 119

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD-DAHVFCTKEQMFNECL 405
           + +  +KSYR+LP +  +  S++R E   +   ++R+R  T   +AH             
Sbjct: 120 MESFWIKSYRQLPKKYYQIVSIFRYETK-ATRPMIRLREVTTFKEAHTVHDS-------- 170

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
                                          +D    +A  + K + D +          
Sbjct: 171 ----------------------------FADADRQVAEAIELYKKIFDELGIPYVISRRP 202

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIH 524
                 GA Y   F+ I+ D  G+  Q GT+  +  N    F+           +     
Sbjct: 203 EWDKFAGAVYTVAFDTIMPD--GKTLQIGTVHHLGQNFTVPFDVKIQLRDESIDYA---W 257

Query: 525 RAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSS--------AVEYAQEIA 572
           +  +G  +R +  +I    ++    LP  ++PIQ +V  I +           E+ +++ 
Sbjct: 258 QTSYGISDRIVATVIAIHGDDRGAVLPPNVAPIQVVVIPIPAGDDEEKKRLVAEHLEKVK 317

Query: 573 NLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
            +LK   +    D R +     K  E   K +P+ I  G +EA   ++ + R  +     
Sbjct: 318 EVLKKAGIRFRVDDREDVRPGRKFYEWEAKGVPVRIEVGLREAETGTVLVARRDTLEKTV 377

Query: 632 VSL 634
           V L
Sbjct: 378 VKL 380


>gi|229176981|ref|ZP_04304376.1| Prolyl-tRNA synthetase 2 [Bacillus cereus 172560W]
 gi|229188661|ref|ZP_04315700.1| Prolyl-tRNA synthetase 2 [Bacillus cereus ATCC 10876]
 gi|228594850|gb|EEK52630.1| Prolyl-tRNA synthetase 2 [Bacillus cereus ATCC 10876]
 gi|228606456|gb|EEK63882.1| Prolyl-tRNA synthetase 2 [Bacillus cereus 172560W]
          Length = 476

 Score =  180 bits (457), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 83/429 (19%), Positives = 169/429 (39%), Gaps = 60/429 (13%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           E  Q +  +EE   + +  + ++ +L   +    G +     G+ +++ +   M  K+K+
Sbjct: 4   EQVQAITKMEEDFAQWYTDIVKKAELVDYSSVK-GCMILRPYGYALWENMQKVMDEKLKE 62

Query: 290 -DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
             +E +  P  + + L  ++  H + +   +  V    D     R   ++P +       
Sbjct: 63  TGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGDEKLAER-LCVRPTSETLFCEH 121

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH-VFCTKEQMFNECLK 406
           F+  ++SY +LP    ++ SV R E   +    +R   F   + H +  T E+   E L 
Sbjct: 122 FSKIVQSYNDLPKLYNQWCSVVRWEK--TTRPFLRTTEFLWQEGHTIHETAEESQAETLN 179

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           I NL  S  +D+    ++    T  EK  G+ A +                         
Sbjct: 180 ILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKATY------------------------- 214

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
                        E ++ D  G+  Q GT      N    F+  +++ + +  +   +H+
Sbjct: 215 -----------TIESLMHD--GKALQTGTSHNFGTNFSEAFDIKFLDRNGKWQY---VHQ 258

Query: 526 AVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSH 578
             +G   R IG +I    +N    +P  ++P+Q ++  I       +  A E+   ++  
Sbjct: 259 TSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLAKAIELQAHIQKV 318

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS---LL 635
              ++ D  N+T  +K  E+ +K IPI +  G K+  +  + + R  +   + V    L 
Sbjct: 319 -ARVKIDASNKTPGWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEKEFVPMDQLE 377

Query: 636 DAIPILTKE 644
           + IP L +E
Sbjct: 378 ERIPALLEE 386


>gi|168182030|ref|ZP_02616694.1| proline--tRNA ligase [Clostridium botulinum Bf]
 gi|182674785|gb|EDT86746.1| proline--tRNA ligase [Clostridium botulinum Bf]
          Length = 478

 Score =  180 bits (457), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 81/420 (19%), Positives = 167/420 (39%), Gaps = 58/420 (13%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
           ++E   + +  + ++ +L   +     +I     G+ I++ +  Y+  K+K+  +E ++ 
Sbjct: 14  MDEDFAQWYTDIVKKAELADYSSIRGCMII-RPNGYAIWENIQKYVDTKLKEYGHENVSM 72

Query: 297 PQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P  + ++L  ++  H + +   +  V    D     R   ++P +       +   ++SY
Sbjct: 73  PIFIPENLLQKEKDHVEGFAPEVAWVTHGGDDELAER-LCVRPTSETLFCEHYAKIVQSY 131

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISI 414
           ++LP    ++ SV R E   +    +R   F   + H +  TKE+  +  LKI N+   +
Sbjct: 132 KDLPKLYNQWCSVVRWEK--TTRPFLRTTEFLWQEGHTIHETKEEAESHSLKILNMYSRL 189

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            +D     +++   T  EK  G+D  +                                 
Sbjct: 190 CEDMLAMPVVMGKKTDKEKFAGADDTY--------------------------------- 216

Query: 475 YGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
                E ++ D  G+  Q GT      N    F   + + + +  +P   H   +    R
Sbjct: 217 ---TIESLMHD--GKALQAGTSHYLGQNFSKAFAIQFSDRNGKLDYP---HYTTWAVTTR 268

Query: 534 FIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDF 586
            IG +I    +N    LP  ++P QA++  +       +E A+E+   L    + ++ D 
Sbjct: 269 LIGAIIMVHGDNSGLKLPPRIAPTQAVIIPVAQHKEGVLEKAKELKEKLAKV-VRVKLDD 327

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
            ++   +K  E+ +K IP+ I  G K+  +    + R  +     VSL + I I  +E L
Sbjct: 328 SDKMPGWKYSEYEMKGIPLRIEIGPKDIEKNQAVLVRRDNREKTIVSLDE-IEIKVQEML 386


>gi|228937684|ref|ZP_04100320.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228970572|ref|ZP_04131222.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228977142|ref|ZP_04137543.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis Bt407]
 gi|228782590|gb|EEM30767.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis Bt407]
 gi|228789159|gb|EEM37088.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228821971|gb|EEM67963.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|326938179|gb|AEA14075.1| prolyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 476

 Score =  180 bits (457), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 83/429 (19%), Positives = 169/429 (39%), Gaps = 60/429 (13%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           E  Q +  +EE   + +  + ++ +L   +    G +     G+ +++ +   M  K+K+
Sbjct: 4   EQVQAITKMEEDFAQWYTDIVKKAELVDYSSVK-GCMILRPYGYALWENMQKVMDEKLKE 62

Query: 290 -DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
             +E +  P  + + L  ++  H + +   +  V    D     R   ++P +       
Sbjct: 63  TGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGDEKLAER-LCVRPTSETLFCEH 121

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH-VFCTKEQMFNECLK 406
           F+  ++SY +LP    ++ SV R E   +    +R   F   + H +  T E+   E L 
Sbjct: 122 FSKIVQSYNDLPKLYNQWCSVVRWEK--TTRPFLRTTEFLWQEGHTIHETAEESQAETLN 179

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           I NL  S  +D+    ++    T  EK  G+ A +                         
Sbjct: 180 ILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKATY------------------------- 214

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
                        E ++ D  G+  Q GT      N    F+  +++ + +  +   +H+
Sbjct: 215 -----------TIESLMHD--GKALQTGTSHNFGTNFSEAFDIKFLDRNGKWQY---VHQ 258

Query: 526 AVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSH 578
             +G   R IG +I    +N    +P  ++P+Q ++  I       +  A E+   ++  
Sbjct: 259 TSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLAKATELQGHIQKV 318

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS---LL 635
              ++ D  N+T  +K  E+ +K IPI +  G K+  +  + + R  +   + V    L 
Sbjct: 319 -ARVKIDASNKTPGWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEKEFVPMDQLE 377

Query: 636 DAIPILTKE 644
           + IP L +E
Sbjct: 378 ERIPALLEE 386


>gi|299537091|ref|ZP_07050394.1| prolyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
 gi|298727332|gb|EFI67904.1| prolyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
          Length = 478

 Score =  180 bits (457), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 73/423 (17%), Positives = 158/423 (37%), Gaps = 58/423 (13%)

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEE 293
           +    E   + + +  ++ DL        G I +   G++I++ +   M R+ K+  +  
Sbjct: 1   MSKQLEDFSKWYIETIQKADLMDYTPVR-GCIAFKPDGYEIWEHIQEEMDRRFKETGHRN 59

Query: 294 INTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
              P ++ +  + ++  H + +   +  V  A     + R  AL+P +      ++++ +
Sbjct: 60  AYFPMLIPESFFQKEKDHIEGFSPELPWVTEAAGEQLEER-LALRPTSETMIGHLYSNWI 118

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF-NECLKIHNLI 411
           KSYR+LPV + ++ +V+R E        +R   F   + H     E     E +++ ++ 
Sbjct: 119 KSYRDLPVLINQWANVFRWEKK--TLPFIRTSEFLWQEGHTAHVDEADARQETMQMLDIY 176

Query: 412 ISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
             + +      +     T  E+  G                                   
Sbjct: 177 KEVVEQVLAIPVYDGQKTPSERFAG----------------------------------- 201

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
            A      E ++K+  G+  Q GT           FN  Y+N  ++  +   +H   +G+
Sbjct: 202 -AVDTYSIEAMMKN--GKAVQAGTSHYLGTKFAEAFNIKYLNKANQHEY---VHTTSWGT 255

Query: 531 IERFIGIMIENFKGNLPLWL----SPIQAIVTTI-----TSSAVEYAQEIANLLKSHHLS 581
             R IG +I        L L    +P Q ++  +         +E+  EI   LK+  + 
Sbjct: 256 STRLIGSVIMVHGDEQGLVLPPRIAPTQVVLIPVGPWKKNPQIMEHLDEIFAALKAKGIR 315

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           +  D  +++  YK  E  +K +P+ +  G ++   +   ++       + V L   I  +
Sbjct: 316 VRLDDSDQSPGYKFNEWELKGVPVRVELGPRDLENKQALLKARDEEEKRTVELASIITAI 375

Query: 642 TKE 644
            +E
Sbjct: 376 EEE 378


>gi|319404243|emb|CBI77836.1| Prolyl-tRNA synthetase [Bartonella rochalimae ATCC BAA-1498]
          Length = 441

 Score =  180 bits (457), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 73/448 (16%), Positives = 151/448 (33%), Gaps = 44/448 (9%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  L       +E+E   HR + R   +    +  SG+  W   G K+   +   +R +
Sbjct: 4   SQYFLPILKESPKEAEVISHRFMLRAGMVR---QQTSGIYSWLPLGKKVLDKICKIIREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +     EI  P +    LW++S  ++ Y   M  ++   D     R     P N     
Sbjct: 61  QERAGALEILMPTIQSADLWRESERYNDYGLEMLRIRDRQD-----RDLLYGPTNEEMVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +F   ++SY++LP+ L      +R+E      G+MR R F   DA+ F           
Sbjct: 116 DIFRSYVRSYKDLPLNLYHIQWKFRDEIRPRF-GVMRAREFLMKDAYSFDLDYASAKISY 174

Query: 406 -KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIM------KGVLDTIKNS 458
            ++    +  +   G + I ++  T P     S      A+         K  L+    S
Sbjct: 175 NRMFVAYLRTFSRVGLKAIPMRADTGPIGGELSHEFIILAKTGESSIFCDKRFLEFTVPS 234

Query: 459 -----SQDRINTGVLLGEGAFYGPKFEYI-------LKDAIG---RDWQCGTI-QVDFNL 502
                +   +   ++    + Y    E         + D+     R  + G I       
Sbjct: 235 VSIDFTDKDVLADIVRQWTSLYAATEEMHNEEEWSKVSDSNKLSARGIEVGHIFHFGTKY 294

Query: 503 PSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN----LPLWLSPIQAIV 557
            +   A  +    ++     +    +G    R +  +IE+         P  ++P    +
Sbjct: 295 SAPMGAKVMGQDGKEH---FVSMGSYGIGPSRLVAAVIESSHDEHGIIWPKSIAPFDFGI 351

Query: 558 TTITSSAVEY---AQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
             +     +     + +   L         D  +E    K     +  +P+ +I G K A
Sbjct: 352 INMKPDDEKCSYICETLYQGLIRSGFDPLLDDTSERPGSKFATMDLIGLPVQMIIGPKNA 411

Query: 615 SERSIGIRRFGSTTTQKVSLLDAIPILT 642
           ++  + I+   +   + +++   +   +
Sbjct: 412 TQNEVEIKDRKTGLREVLTVEAVLNRFS 439


>gi|228963504|ref|ZP_04124661.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228796198|gb|EEM43649.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis serovar sotto str.
           T04001]
          Length = 476

 Score =  180 bits (457), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 82/429 (19%), Positives = 170/429 (39%), Gaps = 60/429 (13%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           E  Q +  +EE   + +  + ++ +L   +    G +     G+ +++ +   M  K+K+
Sbjct: 4   EQVQAITKMEEDFAQWYTDIVKKAELVDYSSVK-GCMILRPYGYALWENMQKVMDEKLKE 62

Query: 290 -DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
             +E +  P  + + L  ++  H + +   +  +    D     R   ++P +       
Sbjct: 63  TGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWITHGGDEKLAER-LCVRPTSETLFCEH 121

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH-VFCTKEQMFNECLK 406
           F+  ++SY +LP    ++ SV R E   +    +R   F   + H +  T E+   E L 
Sbjct: 122 FSKIVQSYNDLPKLYNQWCSVVRWEK--TTRPFLRTTEFLWQEGHTIHETAEESQAETLN 179

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           I NL  S  +D+    ++    T  EK  G+ A +                         
Sbjct: 180 ILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKATY------------------------- 214

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
                        E ++ D  G+  Q GT      N    F+  +++ + +  +   +H+
Sbjct: 215 -----------TIESLMHD--GKALQTGTSHNFGTNFSEAFDIKFLDRNGKWQY---VHQ 258

Query: 526 AVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSH 578
             +G   R IG +I    +N    +P  ++P+Q ++  I       +  A E+   ++  
Sbjct: 259 TSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLAKATELQGHIQKV 318

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS---LL 635
              ++ D  N+T  +K  E+ +K IPI +  G K+  +  + + R  +   + +S   L 
Sbjct: 319 -ARVKIDASNKTPGWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEKEFISMDQLE 377

Query: 636 DAIPILTKE 644
           + IP L +E
Sbjct: 378 ERIPALLEE 386


>gi|168178993|ref|ZP_02613657.1| prolyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
 gi|226950778|ref|YP_002805869.1| prolyl-tRNA synthetase [Clostridium botulinum A2 str. Kyoto]
 gi|259511586|sp|C1FM10|SYP_CLOBJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|182670280|gb|EDT82256.1| prolyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
 gi|226841931|gb|ACO84597.1| proline--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
          Length = 478

 Score =  180 bits (457), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 81/420 (19%), Positives = 167/420 (39%), Gaps = 58/420 (13%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
           ++E   + +  + ++ +L   +     +I     G+ I++ +  Y+  K+K+  +E ++ 
Sbjct: 14  MDEDFAQWYTDIVKKAELADYSSIRGCMII-RPNGYAIWENIQKYVDTKLKEYGHENVSM 72

Query: 297 PQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P  + ++L  ++  H + +   +  V    D     R   ++P +       +   ++SY
Sbjct: 73  PIFIPENLLQKEKDHVEGFAPEVAWVTHGGDDELAER-LCVRPTSETLFCEHYAKIVQSY 131

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISI 414
           ++LP    ++ SV R E   +    +R   F   + H +  TKE+  +  LKI N+   +
Sbjct: 132 KDLPKLYNQWCSVVRWEK--TTRPFLRTTEFLWQEGHTIHETKEEAESHSLKILNMYSRL 189

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            +D     +++   T  EK  G+D  +                                 
Sbjct: 190 CEDMLAMPVVMGKKTDKEKFAGADDTY--------------------------------- 216

Query: 475 YGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
                E ++ D  G+  Q GT      N    F   + + + +  +P   H   +    R
Sbjct: 217 ---TIESLMHD--GKALQAGTSHYLGQNFSKAFAIQFSDRNGKLDYP---HYTTWAVTTR 268

Query: 534 FIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDF 586
            IG +I    +N    LP  ++P QA++  +       +E A+E+   L    + ++ D 
Sbjct: 269 LIGAIIMVHGDNSGLKLPPRIAPTQAVIIPVAQHKEGVLEKAKELKEKLAKV-VRVKLDD 327

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
            ++   +K  E+ +K IP+ I  G K+  +    + R  +     VSL + I I  +E L
Sbjct: 328 SDKMPGWKYSEYEMKGIPLRIEIGPKDIEKNQAVLVRRDNREKTIVSLDE-IEIKVQEML 386


>gi|325678420|ref|ZP_08158040.1| proline--tRNA ligase [Ruminococcus albus 8]
 gi|324109921|gb|EGC04117.1| proline--tRNA ligase [Ruminococcus albus 8]
          Length = 480

 Score =  180 bits (457), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 71/428 (16%), Positives = 159/428 (37%), Gaps = 54/428 (12%)

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR 284
               +++   +  ++E   + +  +  + +L         ++     G+ I++ +   + 
Sbjct: 1   MAKNKKMVDAITSMDEDFAKWYTDICTKAELIAYTSVKGCMVI-RPYGYAIWEHIQRILD 59

Query: 285 RKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
            + K+  +E +  P  + + L  ++  H + +   +  V        + R   ++P +  
Sbjct: 60  TRFKELGHENVCMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGSEKLEDR-LCVRPTSET 118

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN 402
                + + + SYR+LP    ++ SV R E   +    +R R F   + H      +   
Sbjct: 119 LFCEHYANIVHSYRDLPKLYNQWVSVVRWEK--TTRPFLRSREFLWQEGHTIH---ETAE 173

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
           E ++    +++ Y DF                          E  +   +   + +  D+
Sbjct: 174 EAIEETERMLNCYADF-------------------------CEKELAMPVVKGRKTDSDK 208

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSR-FNAFYVNSHSEKCHPV 521
                    GA      E ++ D  G+  Q GT     +  +R F+  +    ++  +P 
Sbjct: 209 F-------AGAEATYAIEALMHD--GKALQAGTSHYFGDGFARAFDIQFTGRDNKLSYP- 258

Query: 522 MIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTI---TSSAVEYAQEIANL 574
             H+  +G   R IG +I     +    LP  ++PIQA++  I       +E AQE+   
Sbjct: 259 --HQTSWGVTTRLIGAIIMTHGDDNGLVLPPAVAPIQAVIVPIQQFKEGVLEKAQEVCEQ 316

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           LK+  + ++ D   ++  +K  E+ +K +P+ I  G K+       I            L
Sbjct: 317 LKAAGIRVKVDDSEQSPGWKFAEYEMKGVPVRIELGPKDIENGQCVIVTRHDREKTFTPL 376

Query: 635 LDAIPILT 642
            + +  + 
Sbjct: 377 TELVETVN 384


>gi|213028506|ref|ZP_03342953.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 148

 Score =  180 bits (456), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 54/149 (36%), Positives = 95/149 (63%), Gaps = 4/149 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D SD +  + ++
Sbjct: 1   MPV---ITLPDGSQRHYDHPVSPMDVALDIGPGLAKATIAGRVNGELVDASDLIENDATL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L +IRHSCAH++  A++ +WP  ++AIGP++++GFYYD D ++  + +++
Sbjct: 58  SIITAKDEEGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVVDNGFYYDVDLDRTLTQEDV 117

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARE 148
             +EK+M E+  ++   +K+ +S  +ARE
Sbjct: 118 EALEKRMHELAEKNYDVIKKKVSWHEARE 146


>gi|253680953|ref|ZP_04861756.1| proline--tRNA ligase [Clostridium botulinum D str. 1873]
 gi|253562802|gb|EES92248.1| proline--tRNA ligase [Clostridium botulinum D str. 1873]
          Length = 500

 Score =  180 bits (456), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 73/452 (16%), Positives = 172/452 (38%), Gaps = 60/452 (13%)

Query: 207 YWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVI 266
           +   +    + + + G   + +++  + +  ++E   + +  + ++ +L   A     +I
Sbjct: 5   FKYKNKFNNINNDLGGINMSKKKKFVEAITPMDEDFAKWYTDIVKKAELVDYASVKGCMI 64

Query: 267 FWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCA 324
                G+ I++ +  Y+  K K+  +E +  P  + + L  ++  H + +   +  V   
Sbjct: 65  I-RPYGYAIWENIQKYLDTKFKETGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWVTQG 123

Query: 325 DDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVR 384
            +     R   ++P +       +   ++S+ +LP +  ++ SV R E   +    +R  
Sbjct: 124 GNDTLAER-LCVRPTSETLFCDHYAKIIQSHNDLPKKYNQWCSVVRWEK--TTRPFLRTT 180

Query: 385 GFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDD 443
            F   + H    T E+   E + + N      ++     ++    T  EK  G+ A +  
Sbjct: 181 EFLWQEGHTAHATAEESAQETIDMLNTYADFCENVLAMPVIKGQKTEKEKFAGAKATY-- 238

Query: 444 AENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNL 502
                                               E ++ D  G+  Q GT      N 
Sbjct: 239 ----------------------------------TIESLMHD--GKALQSGTSHNFGDNF 262

Query: 503 PSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVT 558
              FN  Y + +S+  +   +H+  +G   R IG +I    ++    LP  ++P+Q ++ 
Sbjct: 263 SKAFNIQYNDKNSQLQY---VHQTSWGVTTRLIGAIIMVHGDDSGLKLPPRIAPLQVVIV 319

Query: 559 TI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEAS 615
            I       ++ A+E+   +      ++ D  ++   +K  E+ +K +P+ +  G K+  
Sbjct: 320 PIAQHKEGVLDKAEELRQQISKV-ARVKVDSSDKMPGWKFNEYEMKGVPVRLEVGPKDIE 378

Query: 616 ERSIGIRRFGSTTTQKVSLLDA---IPILTKE 644
              + + R  +     VS+ +    IP L  +
Sbjct: 379 NNQVVLVRRDTREKIFVSMDELETKIPELLDD 410


>gi|291548182|emb|CBL21290.1| prolyl-tRNA synthetase, family I [Ruminococcus sp. SR1/5]
          Length = 479

 Score =  180 bits (456), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 71/430 (16%), Positives = 158/430 (36%), Gaps = 56/430 (13%)

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR 284
              +++L Q +  ++E   + +  + ++ +L         +      G+ I++ +   + 
Sbjct: 1   MAKEKKLVQAITSMDEDFAQWYTDVVKKAELCGYTSVKGCMAI-KPAGYAIWENIQHELD 59

Query: 285 RKIKDDYEE-INTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
           R+ K+   E +  P  + + L  ++  H + +   +  V          R   ++P +  
Sbjct: 60  RRFKETGVENVYMPIFIPESLLDKEKDHVEGFAPEVAWVTHGGLDPLQER-LCVRPTSET 118

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMF 401
                +   ++S+R+LP    ++ SV R E   +    +R R F   + H    T E+  
Sbjct: 119 LFCDFYQKEIQSHRDLPKVYNQWCSVVRWEK--TTRPFLRSREFLWQEGHTAHATAEEAE 176

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
              +++ N+     ++     ++    T  EK  G++A +                    
Sbjct: 177 QRTIQMLNIYADFCEEVLAIPVIKGQKTDKEKFAGAEATY-------------------- 216

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHP 520
                             E ++ D  G+  Q GT           F   Y +  +   + 
Sbjct: 217 ----------------TIESLMHD--GKALQSGTSHNFGDGFAKAFGIQYTDKDNTLKY- 257

Query: 521 VMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTI---TSSAVEYAQEIAN 573
             +H+  +G   R IG +I     N    LP  ++P+Q ++  I       +E A E+  
Sbjct: 258 --VHQTSWGMTTRMIGAIIMVHGDNSGLVLPPRIAPVQTVIIPIQQRKEGVMEKADELLA 315

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            LK+  +  + D  +++  +K  E  ++ IP+ + CG K+       + R  +     VS
Sbjct: 316 ALKAAGIRAKVDATDKSPGFKFAEQEMRGIPLRVECGPKDIENGQAVLCRRDTREKYTVS 375

Query: 634 LLDAIPILTK 643
             +    + +
Sbjct: 376 FEELADKVKE 385


>gi|51892640|ref|YP_075331.1| prolyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
 gi|81826140|sp|Q67PA6|SYP_SYMTH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|51856329|dbj|BAD40487.1| prolyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
          Length = 488

 Score =  180 bits (456), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 79/427 (18%), Positives = 166/427 (38%), Gaps = 58/427 (13%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
             E   R +  + R+ DL        G I +   G+++++ + + + ++ K+  +     
Sbjct: 14  QSEDFSRWYIDVIRKADLMDYTPVR-GCIVFKPDGYELWERIQAGLDKRFKETGHRNAYF 72

Query: 297 PQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P ++ +  + ++  H + +   +  V  A     + R  AL+P +      ++   ++SY
Sbjct: 73  PMLIPESFFQKEKEHVEGFNPELPWVTEAGGEKLEER-LALRPTSETIIGHMYAQWIQSY 131

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           R+LPV + ++ +V+R E        +R   F   + H   T      E  +    ++ +Y
Sbjct: 132 RDLPVLINQWANVFRWEKR--TLPFLRTSEFLWQEGH---TAHATEEEAREETMRMLEVY 186

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           +DF      V+        VG                            T      GA  
Sbjct: 187 RDF------VETEMAIPLYVGQ--------------------------KTPSEKFAGAVD 214

Query: 476 GPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
               E ++KD  G+  Q GT      N    F   +++  ++  +   +H   +G   R 
Sbjct: 215 TYSIEAMMKD--GKALQAGTSHYLGQNFAKGFEIKFLDRDNQLKY---VHTTSWGVSTRL 269

Query: 535 IGIMI----ENFKGNLPLWLSPIQAIVTTIT-----SSAVEYAQEIANLLKSHHLSIETD 585
           IG +I    ++    LP  L+PIQ I+  +         +     + + LK+  + ++ D
Sbjct: 270 IGALIMVHGDDRGLALPPRLAPIQVIMIPVGPPKFRDKVMARFDPLFDALKAAGVRVKAD 329

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
            R ET  +K  E  ++ +P+ I  G ++   +   + R  +     V L +A+  +  ++
Sbjct: 330 LREETPGWKFNEWEMRGVPLRIEIGPRDVDNKQCLMVRRDTGEKIPVPLDEAVERV--QA 387

Query: 646 LPPDCQK 652
           L  + Q+
Sbjct: 388 LLEEIQR 394


>gi|162382786|ref|YP_893300.2| prolyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|225862437|ref|YP_002747815.1| prolyl-tRNA synthetase [Bacillus cereus 03BB102]
 gi|229182781|ref|ZP_04310021.1| Prolyl-tRNA synthetase 2 [Bacillus cereus BGSC 6E1]
 gi|152074740|sp|A0R9A0|SYP2_BACAH RecName: Full=Prolyl-tRNA synthetase 2; AltName: Full=Proline--tRNA
           ligase 2; Short=ProRS 2
 gi|225785886|gb|ACO26103.1| proline--tRNA ligase [Bacillus cereus 03BB102]
 gi|228600754|gb|EEK58334.1| Prolyl-tRNA synthetase 2 [Bacillus cereus BGSC 6E1]
          Length = 476

 Score =  180 bits (456), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 83/429 (19%), Positives = 168/429 (39%), Gaps = 60/429 (13%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           E  Q +  +EE   + +  + ++ +L   +    G +     G+ +++ +   M  K+K 
Sbjct: 4   EQVQAITKMEEDFAQWYTDIVKKAELVDYSSVK-GCMILRPYGYALWENMQKVMDEKLKA 62

Query: 290 DYEE-INTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
              E +  P  + + L  ++  H + +   +  V    D     R   ++P +       
Sbjct: 63  TSHENVYMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGDEKLAER-LCVRPTSETLFCEH 121

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH-VFCTKEQMFNECLK 406
           F+  ++SY +LP    ++ SV R E   +    +R   F   + H +  T E+   E L 
Sbjct: 122 FSKIVQSYNDLPKLYNQWCSVVRWEK--TTRPFLRTTEFLWQEGHTIHETAEESQAETLN 179

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           I NL  S  +D+    ++    T  EK  G+ A +                         
Sbjct: 180 ILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKATY------------------------- 214

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
                        E ++ D  G+  Q GT      N    F+  +++ + +  +   +H+
Sbjct: 215 -----------TIESLMHD--GKALQTGTSHNFGTNFSEAFDIKFLDRNGKWQY---VHQ 258

Query: 526 AVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSH 578
             +G   R IG +I    +N    +P  ++P+Q ++  I       +  A E+   ++  
Sbjct: 259 TSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLAKATELQGHIQKV 318

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS---LL 635
              ++ D  N+T  +K  E+ +K IPI +  G K+  +  + + R  +   + +S   L 
Sbjct: 319 -ARVKIDASNKTPGWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEKEFISMDQLE 377

Query: 636 DAIPILTKE 644
           + IP L +E
Sbjct: 378 ERIPALLEE 386


>gi|170759289|ref|YP_001788660.1| prolyl-tRNA synthetase [Clostridium botulinum A3 str. Loch Maree]
 gi|259511588|sp|B1L224|SYP_CLOBM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|169406278|gb|ACA54689.1| proline--tRNA ligase [Clostridium botulinum A3 str. Loch Maree]
          Length = 478

 Score =  180 bits (456), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 80/433 (18%), Positives = 171/433 (39%), Gaps = 58/433 (13%)

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR 284
               ++  + +  ++E   + +  + ++ +L   +     +I     G+ I++ +  Y+ 
Sbjct: 1   MAKDKKFVEDITPMDEDFAQWYTDIVKKAELADYSSIKGCMII-RPNGYAIWENIQKYVD 59

Query: 285 RKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
            K+K+  +E ++ P  + ++L  ++  H + +   +  V    D     R   ++P +  
Sbjct: 60  TKLKEYGHENVSMPIFIPENLLQKEKDHVEGFAPEVAWVTHGGDDELAER-LCVRPTSET 118

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH-VFCTKEQMF 401
                +   ++SY++LP    ++ SV R E   +    +R   F   + H +  TKE+  
Sbjct: 119 LFCEHYAKIVQSYKDLPKLYNQWCSVVRWEK--TTRPFLRTTEFLWQEGHTIHETKEEAE 176

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
           +  LKI N+   + +D     +++   T  EK  G+D  +                    
Sbjct: 177 SHSLKILNMYSRLCEDMLAMPVVMGKKTEKEKFAGADDTY-------------------- 216

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHP 520
                             E ++ D  G+  Q GT      N    F   + + + +  +P
Sbjct: 217 ----------------TIESLMHD--GKALQAGTSHYLGQNFSKAFAIQFSDRNGKLEYP 258

Query: 521 VMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIAN 573
              H   +    R IG +I    ++    LP  ++P QA++  +       +E A+E+  
Sbjct: 259 ---HYTTWAVTTRLIGAIIMVHGDDSGLKLPPRIAPTQAVIIPVAQHKEGVLEKAKELKE 315

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            L    + ++ D  ++   +K  E+ +K IP+ I  G K+  +    + R  +     VS
Sbjct: 316 KLAKV-VRVKLDDSDKMPGWKYSEYEMKGIPLRIEIGPKDIEKNQAVLVRRDNREKTIVS 374

Query: 634 LLDAIPILTKESL 646
           L + I I  +E L
Sbjct: 375 LDE-IEIKVQEML 386


>gi|196045229|ref|ZP_03112461.1| prolyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|196023813|gb|EDX62488.1| prolyl-tRNA synthetase [Bacillus cereus 03BB108]
          Length = 476

 Score =  180 bits (456), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 83/429 (19%), Positives = 168/429 (39%), Gaps = 60/429 (13%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           E  Q +  +EE   + +  + ++ +L   +    G +     G+ +++ +   M  K+K 
Sbjct: 4   EQVQAITKMEEDFAQWYTDIVKKAELVDYSSVK-GCMILRPYGYALWENMQKVMDEKLKA 62

Query: 290 DYEE-INTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
              E +  P  + + L  ++  H + +   +  V    D     R   ++P +       
Sbjct: 63  TSHENVYMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGDEKLAER-LCIRPTSETLFCEH 121

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH-VFCTKEQMFNECLK 406
           F+  ++SY +LP    ++ SV R E   +    +R   F   + H +  T E+   E L 
Sbjct: 122 FSKIVQSYNDLPKLYNQWCSVVRWEK--TTRPFLRTTEFLWQEGHTIHETAEESQAETLN 179

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           I NL  S  +D+    ++    T  EK  G+ A +                         
Sbjct: 180 ILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKATY------------------------- 214

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
                        E ++ D  G+  Q GT      N    F+  +++ + +  +   +H+
Sbjct: 215 -----------TIESLMHD--GKALQTGTSHNFGTNFSEAFDIKFLDRNGKWQY---VHQ 258

Query: 526 AVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSH 578
             +G   R IG +I    +N    +P  ++P+Q ++  I       +  A E+   ++  
Sbjct: 259 TSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLAKATELQGHIQKV 318

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS---LL 635
              ++ D  N+T  +K  E+ +K IPI +  G K+  +  + + R  +   + +S   L 
Sbjct: 319 -ARVKIDASNKTPGWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEKEFISMDQLE 377

Query: 636 DAIPILTKE 644
           + IP L +E
Sbjct: 378 ERIPALLEE 386


>gi|229077749|ref|ZP_04210378.1| Prolyl-tRNA synthetase 2 [Bacillus cereus Rock4-2]
 gi|228705571|gb|EEL57928.1| Prolyl-tRNA synthetase 2 [Bacillus cereus Rock4-2]
          Length = 476

 Score =  179 bits (455), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 84/429 (19%), Positives = 169/429 (39%), Gaps = 60/429 (13%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK- 288
           E  Q +  +EE   + +  + ++ +L   +    G +     G+ +++ +   M  K+K 
Sbjct: 4   EQVQAITKMEEDFAQWYTDIVKKAELVDYSSVK-GCMILRPYGYALWENMQKVMDEKLKG 62

Query: 289 DDYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
             +E +  P  + + L  ++  H + +   +  V    D     R   ++P +       
Sbjct: 63  TGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGDEKLAER-LCVRPTSETLFCEH 121

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH-VFCTKEQMFNECLK 406
           F+  ++SY +LP    ++ SV R E   +    +R   F   + H +  T E+   E L 
Sbjct: 122 FSKIVQSYNDLPKLYNQWCSVVRWEK--TTRPFLRTTEFLWQEGHTIHETAEESQAETLN 179

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           I NL  S  +D+    ++    T  EK  G+ A +                         
Sbjct: 180 ILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKATY------------------------- 214

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
                        E ++ D  G+  Q GT      N    F+  +++ + +  +   +H+
Sbjct: 215 -----------TIESLMHD--GKALQTGTSHNFGTNFSEAFDIKFLDRNGKWQY---VHQ 258

Query: 526 AVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSH 578
             +G   R IG +I    +N    +P  ++P+Q ++  I       +  A E+   ++  
Sbjct: 259 TSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLAKATELQGHIQKV 318

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS---LL 635
              ++ D  N+T  +K  E+ +K IPI +  G K+  +  + + R  +   + VS   L 
Sbjct: 319 -ARVKIDASNKTPGWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEKEFVSMDQLE 377

Query: 636 DAIPILTKE 644
           + IP L +E
Sbjct: 378 ERIPALLEE 386


>gi|170755400|ref|YP_001782969.1| prolyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
 gi|259511587|sp|B1IFI2|SYP_CLOBK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|169120612|gb|ACA44448.1| prolyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
          Length = 478

 Score =  179 bits (455), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 81/433 (18%), Positives = 171/433 (39%), Gaps = 58/433 (13%)

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR 284
               ++  + +  ++E   + +  + ++ +L   +     +I     G+ I++ +  Y+ 
Sbjct: 1   MAKDKKFVEDITPMDEDFAQWYTDIVKKAELADYSSIRGCMII-RPNGYAIWENIQKYVD 59

Query: 285 RKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
            K+K+  +E ++ P  + ++L  ++  H + +   +  V    D     R   ++P +  
Sbjct: 60  TKLKEYGHENVSMPIFIPENLLQKEKDHVEGFAPEVAWVTHGGDDELAER-LCVRPTSET 118

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH-VFCTKEQMF 401
                +   ++SY++LP    ++ SV R E   +    +R   F   + H +  TKE+  
Sbjct: 119 LFCEHYAKIVQSYKDLPKLYNQWCSVVRWEK--TTRPFLRTTEFLWQEGHTIHETKEEAE 176

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
           +  LKI N+   + +D     +++   T  EK  G+D  +                    
Sbjct: 177 SHSLKILNMYSRLCEDMLAMPVVMGKKTDKEKFAGADDTY-------------------- 216

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHP 520
                             E ++ D  G+  Q GT      N    F   + + + +  +P
Sbjct: 217 ----------------TIESLMHD--GKALQAGTSHYLGQNFSKAFAIQFSDRNGKLDYP 258

Query: 521 VMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIAN 573
              H   +    R IG +I    +N    LP  ++P QA++  +       +E A+E+  
Sbjct: 259 ---HYTTWAVTTRLIGAIIMVHGDNSGLKLPPRIAPTQAVIIPVAQHKEGVLEKAEELKE 315

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            L    + ++ D  ++   +K  E+ +K IP+ I  G K+  +    + R  +     VS
Sbjct: 316 RLAKV-VRVKLDDSDKMPGWKYSEYEMKGIPLRIEIGPKDIEKNQAVLVRRDNREKTIVS 374

Query: 634 LLDAIPILTKESL 646
           L + I I  +E L
Sbjct: 375 LDE-IEIKVQEML 386


>gi|153938581|ref|YP_001392690.1| prolyl-tRNA synthetase [Clostridium botulinum F str. Langeland]
 gi|171769234|sp|A7GIT0|SYP_CLOBL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|152934477|gb|ABS39975.1| proline--tRNA ligase [Clostridium botulinum F str. Langeland]
 gi|295320672|gb|ADG01050.1| proline--tRNA ligase [Clostridium botulinum F str. 230613]
 gi|322807661|emb|CBZ05236.1| prolyl-tRNA synthetase [Clostridium botulinum H04402 065]
          Length = 478

 Score =  179 bits (455), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 81/433 (18%), Positives = 171/433 (39%), Gaps = 58/433 (13%)

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR 284
               ++  + +  ++E   + +  + ++ +L   +     +I     G+ I++ +  Y+ 
Sbjct: 1   MAKDKKFVEDITPMDEDFAQWYTDIVKKAELADYSSIRGCMII-RPNGYAIWENIQKYVD 59

Query: 285 RKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
            K+K+  +E ++ P  + ++L  ++  H + +   +  V    D     R   ++P +  
Sbjct: 60  TKLKEYGHENVSMPIFIPENLLQKEKDHVEGFAPEVAWVTHGGDDELAER-LCVRPTSET 118

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH-VFCTKEQMF 401
                +   ++SY++LP    ++ SV R E   +    +R   F   + H +  TKE+  
Sbjct: 119 LFCEHYAKIVQSYKDLPKLYNQWCSVVRWEK--TTRPFLRTTEFLWQEGHTIHETKEEAE 176

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
           +  LKI N+   + +D     +++   T  EK  G+D  +                    
Sbjct: 177 SHSLKILNMYSRLCEDMLAMPVVMGKKTDKEKFAGADDTY-------------------- 216

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHP 520
                             E ++ D  G+  Q GT      N    F   + + + +  +P
Sbjct: 217 ----------------TIESLMHD--GKALQAGTSHYLGQNFSKAFAIQFSDRNGKLDYP 258

Query: 521 VMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIAN 573
              H   +    R IG +I    +N    LP  ++P QA++  +       +E A+E+  
Sbjct: 259 ---HYTTWAVTTRLIGAIIMVHGDNSGLKLPPRIAPTQAVIIPVAQHKEGVLEKAEELKE 315

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            L    + ++ D  ++   +K  E+ +K IP+ I  G K+  +    + R  +     VS
Sbjct: 316 RLAKV-VRVKLDDSDKMPGWKYSEYEMKGIPLRIEIGPKDIEKNQAVLVRRDNREKTIVS 374

Query: 634 LLDAIPILTKESL 646
           L + I I  +E L
Sbjct: 375 LDE-IEIKVQEML 386


>gi|229056233|ref|ZP_04195655.1| Prolyl-tRNA synthetase 2 [Bacillus cereus AH603]
 gi|229165394|ref|ZP_04293179.1| Prolyl-tRNA synthetase 2 [Bacillus cereus AH621]
 gi|228618078|gb|EEK75118.1| Prolyl-tRNA synthetase 2 [Bacillus cereus AH621]
 gi|228721106|gb|EEL72643.1| Prolyl-tRNA synthetase 2 [Bacillus cereus AH603]
          Length = 476

 Score =  179 bits (455), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 80/429 (18%), Positives = 171/429 (39%), Gaps = 60/429 (13%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           E  Q +  +EE   + +  + ++ +L   +    G +     G+ +++ +   M  K+K+
Sbjct: 4   EQVQAITKMEEDFAQWYTDIVKKAELVDYSSVK-GCMILRPYGYALWENMQKVMDEKLKE 62

Query: 290 -DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
             +E +  P  + + L  ++  H + +   +  V    D     R   ++P +       
Sbjct: 63  SGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGDEKLAER-LCIRPTSETLFCEH 121

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH-VFCTKEQMFNECLK 406
           F+  ++SY +LP    ++ SV R E   +    +R   F   + H +  T E+   E L 
Sbjct: 122 FSKIVQSYNDLPKLYNQWCSVVRWEK--TTRPFLRTTEFLWQEGHTIHETAEESQIETLN 179

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           I NL  +  +++    ++    T  EK  G+ A +                         
Sbjct: 180 ILNLYAAFCEEYLAIPVIKGQKTEKEKFAGAKATY------------------------- 214

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
                        E ++ D  G+  Q GT      N    F+  +++ + +  +   +H+
Sbjct: 215 -----------TIESLMHD--GKALQTGTSHNFGTNFSEAFDIKFLDRNGKWQY---VHQ 258

Query: 526 AVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSH 578
             +G   R IG +I    +N    +P  ++P+Q ++  I       +E A E+   ++  
Sbjct: 259 TSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPLQVVIVPIAQHKEGVLEKATELQGRIQKV 318

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS---LL 635
              ++ D  N+T  +K  E+ +K +PI +  G K+  +  + + R  +   + ++   L 
Sbjct: 319 -ARVKIDASNKTPGWKFNEYEMKGVPIRLEVGPKDIEKNQVVLVRRDTKEKEFIAMDQLE 377

Query: 636 DAIPILTKE 644
           + IP L +E
Sbjct: 378 ERIPSLLEE 386


>gi|42779590|ref|NP_976837.1| prolyl-tRNA synthetase [Bacillus cereus ATCC 10987]
 gi|81411119|sp|Q73E50|SYP2_BACC1 RecName: Full=Prolyl-tRNA synthetase 2; AltName: Full=Proline--tRNA
           ligase 2; Short=ProRS 2
 gi|42735506|gb|AAS39445.1| prolyl-tRNA synthetase [Bacillus cereus ATCC 10987]
          Length = 476

 Score =  179 bits (455), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 82/429 (19%), Positives = 169/429 (39%), Gaps = 60/429 (13%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           E  Q +  +EE   + +  + ++ +L   +    G +     G+ +++ +   M  K+K 
Sbjct: 4   EQVQAITKMEEDFAQWYTDIVKKAELVDYSSVK-GCMILRPYGYALWENMQKVMDEKLKA 62

Query: 290 -DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
             +E +  P  + + L  ++  H + +   +  V    D     R   ++P +       
Sbjct: 63  TGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGDEKLAER-LCIRPTSETLFCEH 121

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH-VFCTKEQMFNECLK 406
           F+  ++SY +LP    ++ SV R E   +    +R   F   + H +  T E+   E L 
Sbjct: 122 FSKIVQSYNDLPKLYNQWCSVVRWEK--TTRPFLRTTEFLWQEGHTIHETAEESQAETLN 179

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           I NL  S  +D+    ++    T  EK  G+ A +                         
Sbjct: 180 ILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKATY------------------------- 214

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
                        E ++ D  G+  Q GT      N    F+  +++ + +  +   +H+
Sbjct: 215 -----------TIESLMHD--GKALQTGTSHNFGTNFSEAFDIKFLDRNGKWQY---VHQ 258

Query: 526 AVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSH 578
             +G   R IG +I    +N    +P  ++P+Q ++  I       +  A E+   ++  
Sbjct: 259 TSWGVSARMIGGLIMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLAKATELQEHIQKV 318

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS---LL 635
              ++ D  N+T  +K  E+ +K IPI +  G K+  +  + + R  +   + ++   L 
Sbjct: 319 -ARVKIDASNKTPGWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEKEFIAMEQLE 377

Query: 636 DAIPILTKE 644
           + IP L +E
Sbjct: 378 ERIPALLEE 386


>gi|301052111|ref|YP_003790322.1| prolyl-tRNA synthetase [Bacillus anthracis CI]
 gi|300374280|gb|ADK03184.1| prolyl-tRNA synthetase [Bacillus cereus biovar anthracis str. CI]
          Length = 476

 Score =  179 bits (454), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 83/429 (19%), Positives = 168/429 (39%), Gaps = 60/429 (13%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           E  Q +  +EE   + +  + ++ +L   +    G +     G+ +++ +   M  K+K 
Sbjct: 4   EQVQAITKMEEDFAQWYTDIVKKAELVDYSSVK-GCMILRPYGYALWENMQKVMDEKLKA 62

Query: 290 -DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
             +E +  P  + + L  ++  H + +   +  V    D     R   ++P +       
Sbjct: 63  TGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGDEKLAER-LCVRPTSETLFCEH 121

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH-VFCTKEQMFNECLK 406
           F+  ++SY +LP    ++ SV R E   +    +R   F   + H +  T E+   E L 
Sbjct: 122 FSKIVQSYNDLPKLYNQWCSVVRWEK--TTRPFLRTTEFLWQEGHTIHETAEESQAETLN 179

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           I NL  S  +D+    ++    T  EK  G+ A +                         
Sbjct: 180 ILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKATY------------------------- 214

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
                        E ++ D  G+  Q GT      N    F+  +++   +  +   +H+
Sbjct: 215 -----------TIESLMHD--GKALQTGTSHNFGTNFSEAFDIKFLDRTGKWQY---VHQ 258

Query: 526 AVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSH 578
             +G   R IG +I    +N    +P  ++P+Q ++  I       +  A E+   ++  
Sbjct: 259 TSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLAKATELQGHIQKV 318

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS---LL 635
              ++ D  N+T  +K  E+ +K IPI +  G K+  +  + + R  +   + +S   L 
Sbjct: 319 -ARVKIDASNKTPGWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEKEFISMDQLE 377

Query: 636 DAIPILTKE 644
           + IP L +E
Sbjct: 378 ERIPALLEE 386


>gi|229068144|ref|ZP_04201451.1| Prolyl-tRNA synthetase 2 [Bacillus cereus F65185]
 gi|228714958|gb|EEL66826.1| Prolyl-tRNA synthetase 2 [Bacillus cereus F65185]
          Length = 476

 Score =  179 bits (454), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 82/429 (19%), Positives = 168/429 (39%), Gaps = 60/429 (13%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK- 288
           E  Q +  +EE   + +  + ++ +L   +    G +     G+ +++ +   +  K+K 
Sbjct: 4   EQVQAITKMEEDFAQWYTDIVKKAELVDYSSVK-GCMILRPYGYALWENMQKVIDEKLKG 62

Query: 289 DDYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
             +E +  P  + + L  ++  H + +   +  V    D     R   ++P +       
Sbjct: 63  TGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGDEKLAER-LCVRPTSETLFCEH 121

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH-VFCTKEQMFNECLK 406
           F+  ++SY +LP    ++ SV R E   +    +R   F   + H +  T E+   E L 
Sbjct: 122 FSKIVQSYNDLPKLYNQWCSVVRWEK--TTRPFLRTTEFLWQEGHTIHETAEESQAETLN 179

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           I NL  S  +D+    ++    T  EK  G+ A +                         
Sbjct: 180 ILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKATY------------------------- 214

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
                        E ++ D  G+  Q GT      N    F+  +++ + +  +   +H+
Sbjct: 215 -----------TIESLMHD--GKALQTGTSHNFGTNFSEAFDIKFLDRNGKWQY---VHQ 258

Query: 526 AVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSH 578
             +G   R IG +I    +N    +P  ++P+Q ++  I       +  A E+   ++  
Sbjct: 259 TSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLAKAIELQAHIQKV 318

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS---LL 635
              ++ D  N+T  +K  E+ +K IPI +  G K+  +  + + R  +   + V    L 
Sbjct: 319 -ARVKIDASNKTPGWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEKEFVPMDQLE 377

Query: 636 DAIPILTKE 644
           + IP L +E
Sbjct: 378 ERIPALLEE 386


>gi|229171240|ref|ZP_04298831.1| Prolyl-tRNA synthetase 2 [Bacillus cereus MM3]
 gi|228612233|gb|EEK69464.1| Prolyl-tRNA synthetase 2 [Bacillus cereus MM3]
          Length = 476

 Score =  179 bits (454), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 82/429 (19%), Positives = 168/429 (39%), Gaps = 60/429 (13%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           E  Q +  +EE   + +  + ++ +L   +    G +     G+ +++ +   M  K+K 
Sbjct: 4   EQVQAITKMEEDFAQWYTDIVKKAELVDYSSVK-GCMILRPYGYALWENMQKVMDEKLKA 62

Query: 290 -DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
             +E +  P  + + L  ++  H + +   +  V    D     R   ++P +       
Sbjct: 63  TGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGDEKLAER-LCVRPTSETLFCEH 121

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH-VFCTKEQMFNECLK 406
           F+  ++SY +LP    ++ SV R E   +    +R   F   + H +  T E+   E L 
Sbjct: 122 FSKIVQSYNDLPKLYNQWCSVVRWEK--TTRPFLRTTEFLWQEGHTIHETAEESQAETLH 179

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           I NL  S  +D+    ++    T  EK  G+ A +                         
Sbjct: 180 ILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKATY------------------------- 214

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
                        E ++ D  G+  Q GT      N    F+  +++ + +  +   +H+
Sbjct: 215 -----------TIESLMHD--GKALQTGTSHNFGTNFSEAFDIKFLDRNGKWQY---VHQ 258

Query: 526 AVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSH 578
             +G   R IG +I    +N    +P  ++P+Q ++  I       +  A E+   ++  
Sbjct: 259 TSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLAKATELQEHIQKV 318

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA- 637
              ++ D  N+T  +K  E+ +K IPI +  G K+  +  + + R  +   + +S+    
Sbjct: 319 -ARVKIDASNKTPGWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEKEFISMDQLE 377

Query: 638 --IPILTKE 644
             IP L +E
Sbjct: 378 KRIPALLEE 386


>gi|47567221|ref|ZP_00237935.1| prolyl-tRNA synthetase [Bacillus cereus G9241]
 gi|206974268|ref|ZP_03235185.1| prolyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217957991|ref|YP_002336535.1| prolyl-tRNA synthetase [Bacillus cereus AH187]
 gi|229137257|ref|ZP_04265874.1| Prolyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST26]
 gi|47556064|gb|EAL14401.1| prolyl-tRNA synthetase [Bacillus cereus G9241]
 gi|206747508|gb|EDZ58898.1| prolyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217066763|gb|ACJ81013.1| prolyl-tRNA synthetase [Bacillus cereus AH187]
 gi|228646252|gb|EEL02469.1| Prolyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST26]
          Length = 476

 Score =  179 bits (454), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 82/429 (19%), Positives = 169/429 (39%), Gaps = 60/429 (13%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           E  Q +  +EE   + +  + ++ +L   +    G +     G+ +++ +   M  K+K 
Sbjct: 4   EQVQAITKMEEDFAQWYTDIVKKAELVDYSSVK-GCMILRPYGYALWENMQKVMDEKLKA 62

Query: 290 -DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
             +E +  P  + + L  ++  H + +   +  V    D     R   ++P +       
Sbjct: 63  TGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGDEKLAER-LCIRPTSETLFCEH 121

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH-VFCTKEQMFNECLK 406
           F+  ++SY +LP    ++ SV R E   +    +R   F   + H +  T E+   E L 
Sbjct: 122 FSKIVQSYNDLPKLYNQWCSVVRWEK--TTRPFLRTTEFLWQEGHTIHETAEESQAETLN 179

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           I NL  S  +D+    ++    T  EK  G+ A +                         
Sbjct: 180 ILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKATY------------------------- 214

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
                        E ++ D  G+  Q GT      N    F+  +++ + +  +   +H+
Sbjct: 215 -----------TIESLMHD--GKALQTGTSHNFGTNFSEAFDIKFLDRNGKWQY---VHQ 258

Query: 526 AVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSH 578
             +G   R IG +I    +N    +P  ++P+Q ++  I       +  A E+   ++  
Sbjct: 259 TSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLAKATELQGHIQKV 318

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS---LL 635
              ++ D  N+T  +K  E+ +K IPI +  G K+  +  + + R  +   + ++   L 
Sbjct: 319 -ARVKIDASNKTPGWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEKEFIAMDQLE 377

Query: 636 DAIPILTKE 644
           + IP L +E
Sbjct: 378 ERIPALLEE 386


>gi|228983651|ref|ZP_04143854.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228776089|gb|EEM24452.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 476

 Score =  179 bits (454), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 82/429 (19%), Positives = 169/429 (39%), Gaps = 60/429 (13%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           E  Q +  +EE   + +  + ++ +L   +    G +     G+ +++ +   M  K+K 
Sbjct: 4   EQVQAITKMEEDFAQWYTDIVKKAELVDYSSVK-GCMILRPYGYALWENMQKVMDEKLKA 62

Query: 290 -DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
             +E +  P  + + L  ++  H + +   +  V    D     R   ++P +       
Sbjct: 63  TGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGDEKLAER-LCIRPTSETLFCEH 121

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH-VFCTKEQMFNECLK 406
           F+  ++SY +LP    ++ SV R E   +    +R   F   + H +  T E+   E L 
Sbjct: 122 FSKIVQSYNDLPKLYNQWCSVVRWEK--TTRPFLRTTEFLWQEGHTIHETAEESQAETLN 179

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           I NL  S  +D+    ++    T  EK  G+ A +                         
Sbjct: 180 ILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKATY------------------------- 214

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
                        E ++ D  G+  Q GT      N    F+  +++ + +  +   +H+
Sbjct: 215 -----------TIESLMHD--GKALQTGTSHNFGTNFSEAFDIKFLDRNGKWQY---VHQ 258

Query: 526 AVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSH 578
             +G   R IG +I    +N    +P  ++P+Q ++  I       +  A E+   ++  
Sbjct: 259 TSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLAKATELQGHIQKV 318

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS---LL 635
              ++ D  N+T  +K  E+ +K IPI +  G K+  +  + + R  +   + ++   L 
Sbjct: 319 -ARVKIDASNKTPGWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEKEFIAMDQLE 377

Query: 636 DAIPILTKE 644
           + IP L +E
Sbjct: 378 ERIPALLEE 386


>gi|298675789|ref|YP_003727539.1| prolyl-tRNA synthetase [Methanohalobium evestigatum Z-7303]
 gi|298288777|gb|ADI74743.1| prolyl-tRNA synthetase [Methanohalobium evestigatum Z-7303]
          Length = 479

 Score =  179 bits (454), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 70/412 (16%), Positives = 157/412 (38%), Gaps = 58/412 (14%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQ 298
           +E+    +  +  + ++  +     G+  W+  G+ I +   S +R  +  D+EE   P 
Sbjct: 12  KENFSEWYNDILVKAEIMDVRYPVKGLYVWNPFGFSIRKKTYSIIRELLDRDHEETLFPL 71

Query: 299 VLDQ-HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           ++ +    +++ H   +   ++ V     +  ++   AL+P +      ++   ++S+ +
Sbjct: 72  LIPENEFMKETKHIKGFEEEVYWVTHGGTSPLEV-NLALRPTSETAIYPIYKLWVRSHAD 130

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFT-QDDAHVFC-TKEQMFNECLKIHNLIISIY 415
           LP++  +  + +R E       L+R+R  T   +AH    T E    +  +  +     Y
Sbjct: 131 LPIKYYQIVNTFRYETK-HTRPLIRLREITSFKEAHTVHETWEDAAAQVDEAIDRYHEFY 189

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           +      +  K              WD                             GA Y
Sbjct: 190 ERLCLPVLTSKRPE-----------WDKF--------------------------PGADY 212

Query: 476 GPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
               + ++ D  GR  Q GT   +  N    F+  Y + + E+   V  +++ +G  ER 
Sbjct: 213 TIAVDALMPD--GRTLQVGTAHHLGNNFAKTFDIEYEDPNGEQ---VYAYQSCYGISERC 267

Query: 535 IGIMI----ENFKGNLPLWLSPIQAIVTT------ITSSAVEYAQEIANLLKSHHLSIET 584
           I  MI    ++    LP  ++P+Q I+           S ++  + +   L+S  +  + 
Sbjct: 268 IAAMISVHGDDKGLILPPEIAPVQVIIIPIIFKNKDKESILDACKNVKGSLESAGVKTKI 327

Query: 585 DFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
           D  +     K     +K +P+ I  G K+    S+ + R  +   +++++ +
Sbjct: 328 DTSDRRPGAKYYRWEMKGVPLRIEIGPKDLKNESVMMVRRDTGDKEQIAMDE 379


>gi|228989573|ref|ZP_04149557.1| Prolyl-tRNA synthetase 2 [Bacillus pseudomycoides DSM 12442]
 gi|228770110|gb|EEM18690.1| Prolyl-tRNA synthetase 2 [Bacillus pseudomycoides DSM 12442]
          Length = 476

 Score =  179 bits (454), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 82/429 (19%), Positives = 169/429 (39%), Gaps = 60/429 (13%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           E  Q +  +EE   + +  + ++ +L   +    G +     G+ +++ +   M  K+K+
Sbjct: 4   EQVQAITKMEEDFAQWYTDIVKKAELVDYSSVK-GCMILRPYGYALWENMQKVMDGKLKE 62

Query: 290 -DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
             +E +  P  + + L  ++  H + +   +  V    D     R   ++P +       
Sbjct: 63  SGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGDEKLAER-LCVRPTSETLFCEH 121

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH-VFCTKEQMFNECLK 406
           F+  ++SY +LP    ++ SV R E   +    +R   F   + H +  T E+   E L 
Sbjct: 122 FSKIVQSYNDLPKLYNQWCSVVRWEK--TTRPFLRTTEFLWQEGHTIHETAEESQEETLN 179

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           I NL  S  +D+    ++    T  EK  G+ A +                         
Sbjct: 180 ILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKATY------------------------- 214

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
                        E ++ D  G+  Q GT      N    F+  +++ + +  +   +H+
Sbjct: 215 -----------TIESLMHD--GKALQTGTSHNFGTNFSEAFDIKFLDRNGKWQY---VHQ 258

Query: 526 AVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSH 578
             +G   R IG +I    +N    +P  ++P+Q ++  I       +E A ++   ++  
Sbjct: 259 TSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLEKATQLQGRIQKV 318

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS---LL 635
              ++ D  N+T  +K  E+ +K +PI +  G K+  +  + + R  +   + VS   L 
Sbjct: 319 -ARVKIDASNKTPGWKFNEYEMKGVPIRLEVGPKDIEKNQVVLVRRDTKEKEFVSMDQLE 377

Query: 636 DAIPILTKE 644
           + I  L  E
Sbjct: 378 ERITSLLDE 386


>gi|153854756|ref|ZP_01995990.1| hypothetical protein DORLON_01988 [Dorea longicatena DSM 13814]
 gi|149752663|gb|EDM62594.1| hypothetical protein DORLON_01988 [Dorea longicatena DSM 13814]
          Length = 479

 Score =  179 bits (454), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 74/427 (17%), Positives = 160/427 (37%), Gaps = 56/427 (13%)

Query: 228 QQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI 287
           +++L + +   +E   + +  + RE +L   +    G + +   G+ I++ + + + R+ 
Sbjct: 3   KEKLVKNITSRDEDFAQWYTDVVREANLCDYSSVK-GCMNYLPNGYAIWELIQADLDRRF 61

Query: 288 KDDYEE-INTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           K+   E +  P ++ + L + ++ H + +   +  V          R   ++P +     
Sbjct: 62  KETGVENVYLPVLIPESLLEKEADHVEGFAPEVAWVTHGGMERLQER-LCVRPTSETLFC 120

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNEC 404
            ++   +KSYR+LP    ++ SV R E   +    +R R F   + H    T E+     
Sbjct: 121 DLWAKTVKSYRDLPKVWNQWNSVLRWEK--TTRPFLRSREFLWQEGHTLHATYEEAEERT 178

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
           +++  +    YK+      +       EK  G++  +                       
Sbjct: 179 IQMWEVYKDCYKETMAIPFVAGRKAEHEKFAGAEDTY----------------------- 215

Query: 465 TGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFN-LPSRFNAFYVNSHSEKCHPVMI 523
                          E ++ D  G+  Q  T     N  P  F   YV+ ++E       
Sbjct: 216 -------------TIEALMHD--GKALQSATSHFFGNGFPDAFGIKYVDKNNELHSAYE- 259

Query: 524 HRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIANLLK 576
               +G   R IG +I    ++    LP  ++P++  +  I       ++ +  + + LK
Sbjct: 260 --TSWGWSTRSIGALIMVHGDDDGLVLPPHVAPVECRIIPIAQHKEGVLDRSYALLDELK 317

Query: 577 SHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
                ++ D  +++  +K  E  I  IP  I  G K+  +  + + R  +     VSL +
Sbjct: 318 KAGYRVKIDDSDKSTGWKFSEQEILGIPTRIEIGPKDIEKNQVVVVRRDNREKIVVSLDE 377

Query: 637 AIPILTK 643
               L +
Sbjct: 378 IAVKLRE 384


>gi|325261340|ref|ZP_08128078.1| proline--tRNA ligase [Clostridium sp. D5]
 gi|324032794|gb|EGB94071.1| proline--tRNA ligase [Clostridium sp. D5]
          Length = 480

 Score =  179 bits (454), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 79/430 (18%), Positives = 162/430 (37%), Gaps = 56/430 (13%)

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR 284
              +++L + +   +E   + +  + RE  L   +    G + +   G+ I++ + S + 
Sbjct: 1   MAKEKKLVESITSRDEDFAQWYTDVVREAKLCDYSGVK-GCLNYLPNGYAIWENIQSDLD 59

Query: 285 RKIKDDYEE-INTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
           ++ KD   E +  P ++ + L  ++S H + +   +  V          R F ++P +  
Sbjct: 60  KRFKDTGVENVYLPVLIPEALLQKESDHIEGFAPEVAWVTHGGLERLQER-FCIRPTSET 118

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMF 401
               +++  ++SYR+LP    ++ SV R E   +    +R R F   + H    T E+  
Sbjct: 119 LFCDLWSKTVQSYRDLPKVWNQWCSVLRWEK--TTRPFLRSREFLWQEGHTIHATYEEAE 176

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
              L +      +Y+DF                                + D +      
Sbjct: 177 QRTLTM----RDVYRDF--------------------------------IQDDLAIPLLS 200

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHP 520
              T      GA      E ++ D  G+  Q  T      + P  F+  Y + ++E    
Sbjct: 201 GRKTESEKFAGAQDTYTVEALMHD--GKALQSATSHFFGSSFPDAFDIKYADKNNELHS- 257

Query: 521 VMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIAN 573
             ++   +G   R IG +I    ++    LP  ++P+Q  V  I       ++ A E+ +
Sbjct: 258 --VYETSWGLSTRIIGAIIMVHGDDSGLVLPPRIAPVQTRVIPIAQHKEGVLDKANELLD 315

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
           +LK+     + D   ++  +K  E  +  IP  I  G K+     + + R  +     VS
Sbjct: 316 VLKAAGYKAKIDDSEKSPGWKFSEQEMLGIPTRIEIGPKDIENNQVVVVRRDTREKIVVS 375

Query: 634 LLDAIPILTK 643
           + +    L +
Sbjct: 376 IDEITTKLGE 385


>gi|237796784|ref|YP_002864336.1| prolyl-tRNA synthetase [Clostridium botulinum Ba4 str. 657]
 gi|259511585|sp|C3KUV8|SYP_CLOB6 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|229260679|gb|ACQ51712.1| proline--tRNA ligase [Clostridium botulinum Ba4 str. 657]
          Length = 478

 Score =  179 bits (454), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 79/433 (18%), Positives = 171/433 (39%), Gaps = 58/433 (13%)

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR 284
               ++  + +  ++E   + +  + ++ +L   +     +I     G+ I++ +  Y+ 
Sbjct: 1   MAKDKKFVEDITPMDEDFAQWYTDIVKKAELADYSSIKGCMII-RPNGYAIWENIQKYVD 59

Query: 285 RKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
            K+K+  +E ++ P  + ++L  ++  H + +   +  V    D     R   ++P +  
Sbjct: 60  TKLKEYGHENVSMPIFIPENLLQKEKDHVEGFAPEVAWVTHGGDDELAER-LCVRPTSET 118

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH-VFCTKEQMF 401
                +   ++SY++LP    ++ SV R E   +    +R   F   + H +  TKE+  
Sbjct: 119 LFCEHYAKIVQSYKDLPKLYNQWCSVVRWEK--TTRPFLRTTEFLWQEGHTIHETKEEAE 176

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
           +  LKI N+   + +D     +++   T  EK  G+D  +                    
Sbjct: 177 SHSLKILNMYSRLCEDMLAMPVVMGKKTEKEKFAGADDTY-------------------- 216

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHP 520
                             E ++ D  G+  Q GT      N    F   + + + +  +P
Sbjct: 217 ----------------TIESLMHD--GKALQAGTSHYLGQNFSKAFAIQFSDRNGKLEYP 258

Query: 521 VMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIAN 573
              H   +    R IG +I    ++    LP  ++P QA++  +       +E A+E+  
Sbjct: 259 ---HYTTWAVTTRLIGAIIMVHGDDSGLKLPPRIAPTQAVIIPVAQHKEGVLEKAKELKE 315

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            L    + ++ D  ++   +K  E+ +K IP+ I  G K+  +    + R  +     VS
Sbjct: 316 RLAKV-VRVKLDDSDKMPGWKYSEYEMKGIPLRIEIGPKDIEKNQAVLVRRDNREKTIVS 374

Query: 634 LLDAIPILTKESL 646
           L + I +  +E L
Sbjct: 375 LDE-IEVKVQEML 386


>gi|229028244|ref|ZP_04184383.1| Prolyl-tRNA synthetase 2 [Bacillus cereus AH1271]
 gi|228733080|gb|EEL83923.1| Prolyl-tRNA synthetase 2 [Bacillus cereus AH1271]
          Length = 476

 Score =  179 bits (454), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 82/429 (19%), Positives = 169/429 (39%), Gaps = 60/429 (13%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           E  Q +  +EE   + +  + ++ +L   +    G +     G+ +++ +   M  K+K 
Sbjct: 4   EQVQAITKMEEDFAKWYTDIVKKAELVDYSSVK-GCMILRPYGYALWENMQKVMDEKLKA 62

Query: 290 -DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
             +E +  P  + + L  ++  H + +   +  V    D     R   ++P +       
Sbjct: 63  TGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGDEKLAER-LCVRPTSETLFCEH 121

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH-VFCTKEQMFNECLK 406
           F+  ++SY +LP    ++ SV R E   +    +R   F   + H +  T E+   E L 
Sbjct: 122 FSKIVQSYNDLPKLYNQWCSVVRWEK--TTRPFLRTTEFLWQEGHTIHETAEESQAETLH 179

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           I NL  S  +D+    ++    T  EK  G+ A +                         
Sbjct: 180 ILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKATY------------------------- 214

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
                        E ++ D  G+  Q GT      N    F+  +++ + +  +   +H+
Sbjct: 215 -----------TIESLMHD--GKALQTGTSHNFGTNFSEAFDIKFLDRNGKWQY---VHQ 258

Query: 526 AVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSH 578
             +G   R IG +I    +N    +P  ++P+Q ++  I       +  A E+   ++  
Sbjct: 259 TSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLAKATELQEHIQKV 318

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS---LL 635
              ++ D  N+T  +K  E+ +K IPI +  G K+  +  + + R  +   + ++   L 
Sbjct: 319 -ARVKIDASNKTPGWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEKEFIAMDQLE 377

Query: 636 DAIPILTKE 644
           + IP L +E
Sbjct: 378 ERIPALLEE 386


>gi|228995766|ref|ZP_04155427.1| Prolyl-tRNA synthetase 2 [Bacillus mycoides Rock3-17]
 gi|228764010|gb|EEM12896.1| Prolyl-tRNA synthetase 2 [Bacillus mycoides Rock3-17]
          Length = 476

 Score =  179 bits (454), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 82/431 (19%), Positives = 171/431 (39%), Gaps = 60/431 (13%)

Query: 228 QQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI 287
           ++E  Q +  +EE   + +  + ++ +L   +    G +     G+ +++ +   M  K+
Sbjct: 2   EKEQVQAITKMEEDFAQWYTDIVKKAELVDYSSVK-GCMILRPYGYALWENMQKVMDGKL 60

Query: 288 KD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           K+  +E +  P  + + L  ++  H + +   +  V    D     R   ++P +     
Sbjct: 61  KESGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGDEKLAER-LCVRPTSETLFC 119

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH-VFCTKEQMFNEC 404
             F+  ++SY +LP    ++ SV R E   +    +R   F   + H +  T E+   E 
Sbjct: 120 EHFSKIVQSYNDLPKLYNQWCSVVRWEK--TTRPFLRTTEFLWQEGHTIHETAEESQEET 177

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
           L I NL  S  +D+    ++    T  EK  G+ A +                       
Sbjct: 178 LNILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKATY----------------------- 214

Query: 465 TGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMI 523
                          E ++ D  G+  Q GT      N    F+  +++ + +  +   +
Sbjct: 215 -------------TIESLMHD--GKALQTGTSHNFGTNFSEAFDIKFLDRNGKWQY---V 256

Query: 524 HRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIANLLK 576
           H+  +G   R IG +I    +N    +P  ++P+Q ++  I       +E A ++   ++
Sbjct: 257 HQTSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLEKATQLQGRIQ 316

Query: 577 SHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS--- 633
                ++ D  N+T  +K  E+ +K +PI +  G K+  +  + + R  +   + VS   
Sbjct: 317 KV-ARVKIDASNKTPGWKFNEYEMKGVPIRLEVGPKDIEKNQVVLVRRDTKEKEFVSMDQ 375

Query: 634 LLDAIPILTKE 644
           L + I  L  E
Sbjct: 376 LEERITSLLDE 386


>gi|229107523|ref|ZP_04237275.1| Prolyl-tRNA synthetase 2 [Bacillus cereus Rock3-28]
 gi|228675915|gb|EEL31008.1| Prolyl-tRNA synthetase 2 [Bacillus cereus Rock3-28]
          Length = 476

 Score =  179 bits (454), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 82/429 (19%), Positives = 169/429 (39%), Gaps = 60/429 (13%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           E  Q +  +EE   + +  + ++ +L   +    G +     G+ +++ +   M  K+K+
Sbjct: 4   EQVQAITKMEEDFAQWYTDIVKKAELVDYSSVK-GCMILRPYGYALWENMQKVMDEKLKE 62

Query: 290 -DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
             +E +  P  + + L  ++  H + +   +  V    D     R   ++P +       
Sbjct: 63  TGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGDEKLAER-LCVRPTSETLFCEH 121

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLK 406
           F+  ++SY +LP    ++ SV R E   +    +R   F   + H      E+   E L 
Sbjct: 122 FSKIVQSYNDLPKLYNQWCSVVRWEK--TTRPFLRTTEFLWQEGHTIHETGEESQAETLN 179

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           I NL  S  +++    ++    T  EK  G+ A +                         
Sbjct: 180 ILNLYASFCEEYLAIPVIKGQKTEKEKFAGAKATY------------------------- 214

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
                        E ++ D  G+  Q GT      N    F+  +++ + +  +   +H+
Sbjct: 215 -----------TIESLMHD--GKALQTGTSHNFGTNFSEAFDIKFLDRNGKWQY---VHQ 258

Query: 526 AVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSH 578
             +G   R IG +I    +N    +P  ++P+Q ++  I       +E A E+   ++  
Sbjct: 259 TSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPLQVVIVPIAQHKEGVLEKATELQGRIQKV 318

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS---LL 635
              ++ D  N+T  +K  E+ +K IPI +  G K+  +  + + R  +   + +S   L 
Sbjct: 319 -ARVKIDASNKTPGWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEKEFISMDQLE 377

Query: 636 DAIPILTKE 644
           + IP L +E
Sbjct: 378 ERIPSLLEE 386


>gi|148381286|ref|YP_001255827.1| prolyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
 gi|153932635|ref|YP_001385663.1| prolyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|153936422|ref|YP_001389069.1| prolyl-tRNA synthetase [Clostridium botulinum A str. Hall]
 gi|171769224|sp|A7FYU0|SYP_CLOB1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|172047866|sp|A5I768|SYP_CLOBH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|148290770|emb|CAL84901.1| prolyl-tRNA synthetase 1 [Clostridium botulinum A str. ATCC 3502]
 gi|152928679|gb|ABS34179.1| prolyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|152932336|gb|ABS37835.1| proline--tRNA ligase [Clostridium botulinum A str. Hall]
          Length = 478

 Score =  179 bits (453), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 81/420 (19%), Positives = 167/420 (39%), Gaps = 58/420 (13%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
           ++E   + +  + ++ +L   +     +I     G+ I++ +  Y+  K+K+  +E ++ 
Sbjct: 14  MDEDFAQWYTDIVKKAELADYSSIRGCMII-RPNGYGIWENIQKYVDTKLKEYGHENVSM 72

Query: 297 PQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P  + ++L  ++  H + +   +  V    D     R   ++P +       +   ++SY
Sbjct: 73  PIFIPENLLQKEKDHVEGFAPEVAWVTHGGDDELAER-LCVRPTSETLFCEHYAKIVQSY 131

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISI 414
           ++LP    ++ SV R E   +    +R   F   + H +  TKE+  +  LKI N+   +
Sbjct: 132 KDLPKLYNQWCSVVRWEK--TTRPFLRTTEFLWQEGHTIHETKEEAESHSLKILNMYSRL 189

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            +D     +++   T  EK  G+D  +                                 
Sbjct: 190 CEDMLAMPVVMGKKTDKEKFAGADDTY--------------------------------- 216

Query: 475 YGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
                E ++ D  G+  Q GT      N    F   + + + +  +P   H   +    R
Sbjct: 217 ---TIESLMHD--GKALQAGTSHYLGQNFSKAFAIQFSDRNGKLDYP---HYTTWAVTTR 268

Query: 534 FIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDF 586
            IG +I    +N    LP  ++P QA++  +       +E A+E+   L    + ++ D 
Sbjct: 269 LIGAIIMVHGDNSGLKLPPRIAPTQAVIIPVAQHKEGVLEKAKELKEKLAKV-VRVKLDD 327

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
            ++   +K  E+ +K IP+ I  G K+  +    + R  +     VSL + I I  +E L
Sbjct: 328 SDKMPGWKYSEYEMKGIPLRIEIGPKDIEKNQAVLVRRDNREKTIVSLDE-IEIKVQEML 386


>gi|228931896|ref|ZP_04094792.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228827876|gb|EEM73614.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
          Length = 476

 Score =  179 bits (453), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 83/429 (19%), Positives = 168/429 (39%), Gaps = 60/429 (13%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           E  Q +  +EE   + +  + ++ +L   +    G +     G+ +++ +   M  K+K 
Sbjct: 4   EQVQAITKMEEDFAQWYTDIVKKAELVDYSSVK-GCMILRPYGYALWENMQKVMDEKLKA 62

Query: 290 -DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
             +E +  P  + + L  ++  H + +   +  V    D     R   ++P +       
Sbjct: 63  TGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGDEKLAER-LCIRPTSETLFCEH 121

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH-VFCTKEQMFNECLK 406
           F+  ++SY +LP    ++ SV R E   +    +R   F   + H +  T E+   E L 
Sbjct: 122 FSKIVQSYNDLPKLYNQWCSVVRWEK--TTRPFLRTTEFLWQEGHTIHETAEESQAETLN 179

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           I NL  S  +D+    ++    T  EK  G+ A +                         
Sbjct: 180 ILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKATY------------------------- 214

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
                        E ++ D  G+  Q GT      N    F+  +++   +  +   +H+
Sbjct: 215 -----------TIESLMHD--GKALQTGTSHNFGTNFSEAFDIKFLDRTGKWQY---VHQ 258

Query: 526 AVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSH 578
             +G   R IG +I    +N    +P  ++P+Q ++  I       +  A E+   ++  
Sbjct: 259 TSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLAKAIELQGHIQKV 318

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS---LL 635
              ++ D  N+T  +K  E+ +K IPI +  G K+  +  + + R  +   + +S   L 
Sbjct: 319 -ARVKIDASNKTPGWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEKEFISMDQLE 377

Query: 636 DAIPILTKE 644
           + IP L +E
Sbjct: 378 ERIPALLEE 386


>gi|228944201|ref|ZP_04106580.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228815590|gb|EEM61832.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
          Length = 476

 Score =  179 bits (453), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 83/429 (19%), Positives = 168/429 (39%), Gaps = 60/429 (13%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           E  Q +  +EE   + +  + ++ +L   +    G +     G+ +++ +   M  K+K 
Sbjct: 4   EQVQAITKMEEDFAQWYTDIVKKAELVDYSSVK-GCMILRPYGYALWENMQKVMDEKLKA 62

Query: 290 -DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
             +E +  P  + + L  ++  H + +   +  V    D     R   ++P +       
Sbjct: 63  TGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGDEKLAER-LCIRPTSETLFCEH 121

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH-VFCTKEQMFNECLK 406
           F+  ++SY +LP    ++ SV R E   +    +R   F   + H +  T E+   E L 
Sbjct: 122 FSKIVQSYNDLPKLYNQWCSVVRWEK--TTRPFLRTTEFLWQEGHTIHETAEESQAETLN 179

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           I NL  S  +D+    ++    T  EK  G+ A +                         
Sbjct: 180 ILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKATY------------------------- 214

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
                        E ++ D  G+  Q GT      N    F+  +++   +  +   +H+
Sbjct: 215 -----------TIESLMHD--GKALQTGTSHNFGTNFSEAFDIKFLDRTGKWQY---VHQ 258

Query: 526 AVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSH 578
             +G   R IG +I    +N    +P  ++P+Q ++  I       +  A E+   ++  
Sbjct: 259 TSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLAKAIELQGHIQKV 318

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS---LL 635
              ++ D  N+T  +K  E+ +K IPI +  G K+  +  + + R  +   + +S   L 
Sbjct: 319 -ARVKIDASNKTPGWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEKELISMDQLE 377

Query: 636 DAIPILTKE 644
           + IP L +E
Sbjct: 378 ERIPALLEE 386


>gi|228950947|ref|ZP_04113068.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228808674|gb|EEM55172.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
          Length = 476

 Score =  179 bits (453), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 83/429 (19%), Positives = 168/429 (39%), Gaps = 60/429 (13%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK- 288
           E  Q +  +EE   + +  + ++ +L   +    G +     G+ +++ +   M  K+K 
Sbjct: 4   EQVQAITKMEEDFAQWYTDIVKKAELVDYSSVK-GCMILRPYGYALWENMQKVMDEKLKG 62

Query: 289 DDYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
             +E +  P  + + L  ++  H + +   +  V    D     R   ++P +       
Sbjct: 63  TGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGDEKLAER-LCVRPTSETLFCEH 121

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH-VFCTKEQMFNECLK 406
           F+  ++SY +LP    ++ SV R E   +    +R   F   + H +  T E+   E L 
Sbjct: 122 FSKIVQSYNDLPKLYNQWCSVVRWEK--TTRPFLRTTEFLWQEGHTIHETAEESQAETLN 179

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           I NL  S  +D+    ++    T  EK  G+ A +                         
Sbjct: 180 ILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKATY------------------------- 214

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
                        E ++ D  G+  Q GT      N    F+  +++ + +  +   +H+
Sbjct: 215 -----------TIESLMHD--GKALQTGTSHNFGTNFSEAFDIKFLDRNGKWQY---VHQ 258

Query: 526 AVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSH 578
             +G   R IG +I    +N    +P  ++P+Q ++  I       +  A E+   ++  
Sbjct: 259 TSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLAKAIELQEHIQKV 318

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS---LL 635
              ++ D  N+T  +K  E+ +K IPI +  G K+  +  + + R  +   + V    L 
Sbjct: 319 -ARVKIDASNKTPGWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEKEFVPMDQLE 377

Query: 636 DAIPILTKE 644
           + IP L +E
Sbjct: 378 ERIPALLEE 386


>gi|218901598|ref|YP_002449432.1| prolyl-tRNA synthetase [Bacillus cereus AH820]
 gi|228925648|ref|ZP_04088737.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|229120054|ref|ZP_04249309.1| Prolyl-tRNA synthetase 2 [Bacillus cereus 95/8201]
 gi|218539056|gb|ACK91454.1| prolyl-tRNA synthetase [Bacillus cereus AH820]
 gi|228663520|gb|EEL19105.1| Prolyl-tRNA synthetase 2 [Bacillus cereus 95/8201]
 gi|228834126|gb|EEM79674.1| Prolyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
          Length = 476

 Score =  179 bits (453), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 83/429 (19%), Positives = 168/429 (39%), Gaps = 60/429 (13%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           E  Q +  +EE   + +  + ++ +L   +    G +     G+ +++ +   M  K+K 
Sbjct: 4   EQVQAITKMEEDFAQWYTDIVKKAELVDYSSVK-GCMILRPYGYALWENMQKVMDEKLKA 62

Query: 290 -DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
             +E +  P  + + L  ++  H + +   +  V    D     R   ++P +       
Sbjct: 63  TGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGDEKLAER-LCIRPTSETLFCEH 121

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH-VFCTKEQMFNECLK 406
           F+  ++SY +LP    ++ SV R E   +    +R   F   + H +  T E+   E L 
Sbjct: 122 FSKIVQSYNDLPKLYNQWCSVVRWEK--TTRPFLRTTEFLWQEGHTIHETAEESQAETLN 179

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           I NL  S  +D+    ++    T  EK  G+ A +                         
Sbjct: 180 ILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKATY------------------------- 214

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
                        E ++ D  G+  Q GT      N    F+  +++   +  +   +H+
Sbjct: 215 -----------TIESLMHD--GKALQTGTSHNFGTNFSEAFDIKFLDRTGKWQY---VHQ 258

Query: 526 AVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSH 578
             +G   R IG +I    +N    +P  ++P+Q ++  I       +  A E+   ++  
Sbjct: 259 TSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLAKAIELQGHIQKV 318

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS---LL 635
              ++ D  N+T  +K  E+ +K IPI +  G K+  +  + + R  +   + +S   L 
Sbjct: 319 -ARVKIDASNKTPGWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEKEFISMDQLE 377

Query: 636 DAIPILTKE 644
           + IP L +E
Sbjct: 378 ERIPALLEE 386


>gi|57239072|ref|YP_180208.1| prolyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|58579015|ref|YP_197227.1| prolyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|81819260|sp|Q5HBI6|SYP_EHRRW RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|57161151|emb|CAH58064.1| prolyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|58417641|emb|CAI26845.1| Prolyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
          Length = 426

 Score =  179 bits (453), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 75/436 (17%), Positives = 150/436 (34%), Gaps = 33/436 (7%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +     H    R   +  +A   SG+  W   G K+ + + + ++ +
Sbjct: 4   SKYYIPTLKETPADVSVTSHVYSLRSGLIRQVA---SGIYAWLPLGLKVLKNIENVIKEE 60

Query: 287 IK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P +    LWQ+SG ++ Y + M  +K  ++     R     P +     
Sbjct: 61  MNKSGILEVLMPLIQPASLWQESGRYNDYGSEMLRIKDRNN-----REMVFGPTHEEVVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    L SY+ LP+ L +    +R+E     +G+MR R F   DA+ F        E  
Sbjct: 116 DLLRTTLTSYKNLPLILYQVQWKFRDELRPR-YGIMRCREFLMKDAYSFDKDFNSAIESY 174

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA--------ENIMKGVLDTIK 456
             +  + I I++  G   I VK  + P     S      A         +     L    
Sbjct: 175 NLMFKVYIQIFRRLGLTPIAVKADSGPIGGNLSHEFHILANSGESTLYYDQDIINLINND 234

Query: 457 NSSQDRINTGVLLGEGAFYGPKFEYILKDAIG-RDWQCGTIQVDFNLPSRFNAFYVNSHS 515
           N   ++I       +             +    +  + G I    +  S+      + ++
Sbjct: 235 NIDIEKIKNTYTAADDLHNSETCPIPASNIKKSKGIEIGHIFYLGDKYSKTMNAVFSQNN 294

Query: 516 EKCHPVMIHRAVFGS-IERFIGIMIE-NFKGNLPLWLSPIQ------AIVTTITSSAVEY 567
           E     ++H   +G  + R +G +IE +   N  +W   I         V +        
Sbjct: 295 ETQ---LLHMGCYGIGVSRLVGAIIEVSHDNNGIIWPEEIAPFKFSLVNVFSANKECHNI 351

Query: 568 AQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGST 627
           ++ +   L S+   +  D   ++   K     +  +P  +I G        I +R+  S 
Sbjct: 352 SENLYAKLGSND--VLYDDTEDSTGIKFARMDLLGMPWQVIIGKTTIEHGLIEVRQRSSK 409

Query: 628 TTQKVSLLDAIPILTK 643
            +  +S    +    K
Sbjct: 410 KSLLMSTEQFLNNFKK 425


>gi|227872945|ref|ZP_03991245.1| proline--tRNA ligase [Oribacterium sinus F0268]
 gi|227841197|gb|EEJ51527.1| proline--tRNA ligase [Oribacterium sinus F0268]
          Length = 478

 Score =  179 bits (453), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 73/426 (17%), Positives = 161/426 (37%), Gaps = 58/426 (13%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
            EE   + +  + ++ +L   +     ++     G+ I++ +++ +  + K    +  + 
Sbjct: 13  REEDFAQWYTDVVKKAELTDYSSVKGFMVI-RPAGYAIWENIMAALDSRFKATGVQNCSM 71

Query: 297 PQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P ++ Q L + +S H + +   +  V        + R   ++P +       ++  +KSY
Sbjct: 72  PLLIPQSLLEKESEHVEGFAPEVAWVTSGGSKRLEER-LCVRPTSEVLFCDYYSKVVKSY 130

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISI 414
           R+LP  L ++ SV R E   +    +R R F   + H    T E+     L + ++   +
Sbjct: 131 RDLPQLLNQWCSVVRWEK--TTRPFLRTREFLWQEGHTVHATAEEAEERTLLMLDIYADV 188

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            ++     ++    T  EK  G+ A +                                 
Sbjct: 189 LENELAIPVVKGRKTDKEKFAGAIATY--------------------------------- 215

Query: 475 YGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
                E ++ D  G+  QC T           F   Y++ ++       +H+  +G   R
Sbjct: 216 ---TVEALMHD--GQALQCATSHNFGDGFAKAFQVQYLSKNNTVE---PVHQTSWGITTR 267

Query: 534 FIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDF 586
            IG +I    ++    LP  ++P+Q  +  I       ++ A ++ N L    L ++ D 
Sbjct: 268 TIGALIMVHGDDSGLVLPPRIAPVQVNIIPIQQNKEGVLDKAFDLMNTLMDAGLRVKVDD 327

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK--E 644
            ++T  +K  +  ++ IP+ +  G K+     + + R  +     VS  + +    K  E
Sbjct: 328 SDKTPGFKFADSEVRGIPLRLEIGPKDIEAGQVVLVRRDTREKIVVSFENLVEESKKLLE 387

Query: 645 SLPPDC 650
            +  D 
Sbjct: 388 QIQKDM 393


>gi|161763540|ref|YP_081979.2| prolyl-tRNA synthetase [Bacillus cereus E33L]
 gi|114152167|sp|Q63GI2|SYP2_BACCZ RecName: Full=Prolyl-tRNA synthetase 2; AltName: Full=Proline--tRNA
           ligase 2; Short=ProRS 2
          Length = 476

 Score =  179 bits (453), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 83/429 (19%), Positives = 168/429 (39%), Gaps = 60/429 (13%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           E  Q +  +EE   + +  + ++ +L   +    G +     G+ +++ +   M  K+K 
Sbjct: 4   EQVQAITKMEEDFAQWYTDIVKKAELVDYSSVK-GCMILRPYGYALWENMQKVMDEKLKA 62

Query: 290 -DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
             +E +  P  + + L  ++  H + +   +  V    D     R   ++P +       
Sbjct: 63  TGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGDEKLAER-LCIRPTSETLFCEH 121

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH-VFCTKEQMFNECLK 406
           F+  ++SY +LP    ++ SV R E   +    +R   F   + H +  T E+   E L 
Sbjct: 122 FSKIVQSYNDLPKLYNQWCSVVRWEK--TTRPFLRTTEFLWQEGHTIHETAEESQAETLN 179

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           I NL  S  +D+    ++    T  EK  G+ A +                         
Sbjct: 180 ILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKATY------------------------- 214

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
                        E ++ D  G+  Q GT      N    F+  +++   +  +   +H+
Sbjct: 215 -----------TIESLMHD--GKALQTGTSHNFGTNFSEAFDIKFLDRTGKWQY---VHQ 258

Query: 526 AVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSH 578
             +G   R IG +I    +N    +P  ++P+Q ++  I       +  A E+   ++  
Sbjct: 259 TSWGVSTRMIGGLIMVHGDNNGLVMPPKVAPVQVVIVPIAQHKEGVLAKAIELQGHIQKV 318

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS---LL 635
              ++ D  N+T  +K  E+ +K IPI +  G K+  +  + + R  +   + +S   L 
Sbjct: 319 -ARVKIDASNKTPGWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEKEFISMDQLE 377

Query: 636 DAIPILTKE 644
           + IP L +E
Sbjct: 378 ERIPALLEE 386


>gi|319653797|ref|ZP_08007892.1| prolyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
 gi|317394523|gb|EFV75266.1| prolyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
          Length = 479

 Score =  179 bits (453), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 74/424 (17%), Positives = 155/424 (36%), Gaps = 58/424 (13%)

Query: 234 YLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYE 292
                  +  + +    ++ DLF       G I +   G++I++ +   M R+ K+  + 
Sbjct: 1   MSQQKPNNFSKWYLDTIQKADLFDYTPVR-GCIAFKPDGYEIWEHIQEEMDRRFKETGHR 59

Query: 293 EINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
               P ++ +  + ++  H + +   +  +  A     + R  AL+P +      +++  
Sbjct: 60  NAYFPMLIPESFFQKEKDHIEGFSPELPWITEAAGEKLEER-LALRPTSETMIGHLYSDW 118

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN-ECLKIHNL 410
           +KSYR+LPV + ++ +V+R E        +R   F   + H     E+    E +++ ++
Sbjct: 119 IKSYRDLPVLINQWANVFRWEKK--TLPFIRTSEFLWQEGHTAHVDEEDARKETMQMLSI 176

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
              + +      +     T  E+  G                                  
Sbjct: 177 YKEVVEGLLAIPVYDGQKTPSERFAG---------------------------------- 202

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG 529
             A      E ++KD  G+  Q GT           F+  Y+N  ++      +H   +G
Sbjct: 203 --AVDTFSIEAMMKD--GKAVQAGTSHYLGTKFAEAFDIKYLNKENK---HTFVHTTSWG 255

Query: 530 SIERFIGIMIENFKGNLPLWL----SPIQAIVTTI-----TSSAVEYAQEIANLLKSHHL 580
           +  R IG +I        L L    +P Q ++  +       + +E   EI   LK+  +
Sbjct: 256 TSTRLIGSVIMVHGDEQGLVLPPKIAPTQVVLIPVGPWKKNPAIMEKLDEIFAALKAEGI 315

Query: 581 SIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
            +  D  +++  YK  E  +K +P+ I  G ++  +    ++         V L   I  
Sbjct: 316 RVRLDDSDQSPGYKFNEWELKGVPVRIELGPRDLDQNQCLMKARDLGDKVAVPLEAIIDS 375

Query: 641 LTKE 644
           + KE
Sbjct: 376 IKKE 379


>gi|71032103|ref|XP_765693.1| prolyl-tRNA synthetase [Theileria parva strain Muguga]
 gi|68352650|gb|EAN33410.1| prolyl-tRNA synthetase, putative [Theileria parva]
          Length = 683

 Score =  179 bits (453), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 76/503 (15%), Positives = 168/503 (33%), Gaps = 63/503 (12%)

Query: 156 AYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRP 215
             KV+++      +   + +  +         +        F  L  +       D    
Sbjct: 126 KNKVDVVAHPLTNDQSVVMKMEDMLKF-----LTQINHFPTFLPLNDLDSTTHATDKTVN 180

Query: 216 MLSRIYGTAWNTQQELTQYLYFLEESEKR--DHRKLAREMDLFHIAEDGSGVIFWHRKGW 273
            ++ +       + E+      +++ E     + ++    ++     D SG   +    +
Sbjct: 181 SVTTVNSVNNVKKGEVNILGITVKKYENFPEWYSQVIVRSEMIEY-YDISGCYIFLPASY 239

Query: 274 KIFQTLISYMRRKI-KDDYEEINTPQ-VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
            I++    +  ++I +   +    P  V  + L  +  H + +   +  V    D     
Sbjct: 240 FIWEIFNEWFNKQIKQRGVDNCYFPMFVTKERLEAEKTHLEGFSPEVAWVTRNGDVDFPD 299

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
              A++P +       F+  ++SYR+LP++L ++ SV R E        +R R F   + 
Sbjct: 300 -PIAIRPTSETIMYPEFSKWIRSYRDLPLKLNQWNSVVRWEFKQPT-PFIRSREFLWQEG 357

Query: 392 HVFCTKE-QMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKG 450
           H   + E +  +   ++ +L    Y+++    ++  + +  EK  GS          ++ 
Sbjct: 358 HTAHSTEKEALDTVYEMLDLYSKFYEEYLSVPVIKGVKSENEKFAGS-----KMTTSLEA 412

Query: 451 VLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAF 509
                                              A GR  Q  T   +       F+  
Sbjct: 413 --------------------------------FVPANGRGVQAATSHLLGTTFSDMFDIK 440

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTTI----T 561
           Y +   EK     +H+  +G   R IGIMI     +  L + P     Q ++  I     
Sbjct: 441 YEDEEGEKRK---VHQTSWGFTTRSIGIMIMVHGDDRGLVVPPRVAKTQVVIVPILTKTA 497

Query: 562 SSAVEYAQEIANLLKSHHLSIETDF-RNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
              +    E+  LL      ++ D  R  T  +K     ++ +P+ +  G K+    ++ 
Sbjct: 498 DQVISRVNELYKLLTESGFRVKLDDRRGYTPGFKFNHWELRGVPLRLEVGAKDVENNTVR 557

Query: 621 IRRFGSTTTQKVSLLDAIPILTK 643
           + R  +     V L +    + +
Sbjct: 558 LVRRDNFAKADVPLENLTTTIQQ 580


>gi|149191774|ref|ZP_01870012.1| threonyl-tRNA synthetase [Vibrio shilonii AK1]
 gi|148834354|gb|EDL51353.1| threonyl-tRNA synthetase [Vibrio shilonii AK1]
          Length = 146

 Score =  179 bits (453), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 57/136 (41%), Positives = 83/136 (61%)

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYA 568
            YV+ ++E+  PVMIHRA+ GS+ERFIGI+IE + G  P WLSP QA++  IT    +Y 
Sbjct: 1   TYVDENNERQVPVMIHRAILGSLERFIGILIEEYAGFFPTWLSPEQAVIMNITDKQSDYV 60

Query: 569 QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
           QE+   L+   +  + D RNE I +KIREH++K+IP +++CGD+E     I +R      
Sbjct: 61  QEVTQKLQKSGIRAKADLRNEKIGFKIREHTLKRIPYMLVCGDQEMEAGEIAVRTRKGKD 120

Query: 629 TQKVSLLDAIPILTKE 644
             K  + D I  +  E
Sbjct: 121 LGKFKVDDFISYIQAE 136


>gi|226310645|ref|YP_002770539.1| prolyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
 gi|226093593|dbj|BAH42035.1| prolyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
          Length = 488

 Score =  178 bits (452), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 71/423 (16%), Positives = 160/423 (37%), Gaps = 61/423 (14%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
             E   R +    ++ DL        G I +   G+++++ +   M ++ K+  +     
Sbjct: 14  QSEDFSRWYIDAIKKADLMDYTPVR-GCIVFKPDGFELWERIQEAMNKRFKETGHRNAYF 72

Query: 297 PQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P ++ +  + ++  H + +   +  V  A     + +  AL+P +      +++  ++SY
Sbjct: 73  PMLIPESFFQKEKEHIEGFNPELPWVTEAGGEPLEEK-LALRPTSETIIGHMYSQWIQSY 131

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISI 414
           R+LPV + ++ +V+R E        +R   F   + H    T+E+   E +++  +   +
Sbjct: 132 RDLPVLINQWANVFRWEKR--TMPFLRTSEFLWQEGHTAHATEEEARQETMQMLEIYREV 189

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            +                                      +         T      GA 
Sbjct: 190 VE------------------------------------QELAIPVWKGQKTPSERFAGAV 213

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSR-FNAFYVNSHSEKCHPVMIHRAVFGSIER 533
                E ++KD  G+  Q GT     +  +R F   +++  ++  +   +H   +G+  R
Sbjct: 214 DTYSIEAMMKD--GKAVQAGTSHYLGDKFARGFEIKFLDRDNQFKY---VHTTSWGTSTR 268

Query: 534 FIGIMI----ENFKGNLPLWLSPIQAIVTTIT-----SSAVEYAQEIANLLKSHHLSIET 584
            IG MI    ++    LP  ++P Q I+  +         +E    + + +K+  + +  
Sbjct: 269 LIGSMIMVHGDDRGLVLPPRMAPTQVIMIPVGPMKLREKVMEAFDPLFDEIKAAGVRVRA 328

Query: 585 DFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL---DAIPIL 641
           D R ET  +K  E  ++ +P+ +  G ++     + + R  +     VSL      +  L
Sbjct: 329 DLREETPGWKFNEWEMRGVPLRLELGPRDVENGQVILARRDTGEKVTVSLEGIAQTVVQL 388

Query: 642 TKE 644
            +E
Sbjct: 389 LEE 391


>gi|237733955|ref|ZP_04564436.1| prolyl-tRNA synthetase [Mollicutes bacterium D7]
 gi|229383036|gb|EEO33127.1| prolyl-tRNA synthetase [Coprobacillus sp. D7]
          Length = 479

 Score =  178 bits (452), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 69/427 (16%), Positives = 159/427 (37%), Gaps = 57/427 (13%)

Query: 228 QQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI 287
             +    +  +E+   + +  + R+ +L   +    G I +    + +++ +  YM ++ 
Sbjct: 3   NNKKNDAITAMEDDFAQWYTDVCRKAELMDYSSVK-GFIIYRPYSYAMWEAIQQYMDKRF 61

Query: 288 KD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           K+  +E +  P ++ Q L  ++S H + +      V        +     ++P +     
Sbjct: 62  KETGHENVYMPMLIPQSLLQKESDHVEGFAPECAIVTKGGLDDLE-ENLIIRPTSETLFC 120

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN-EC 404
             +   + SYR+LP    ++ SV R E   +    +R   F   + H     E     E 
Sbjct: 121 EHYAKIVNSYRDLPKLYNQWCSVVRWEK--TTRPFLRGSEFLWQEGHTVHASETEARAET 178

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
           L++  +     K+     ++    T  EK  G++  +                       
Sbjct: 179 LQMLEIYEDTAKNLLAIPMLTGRKTEREKFAGAEETY----------------------- 215

Query: 465 TGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFN-LPSRFNAFYVNSHSEKCHPVMI 523
                          E ++ D  G+  Q GT           F+  +++  ++  +   +
Sbjct: 216 -------------TIEALMHD--GKALQSGTSHYFGQGFAKAFDMKFLSKENKLEY---V 257

Query: 524 HRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITS---SAVEYAQEIANLLK 576
           ++  +G   R +G +I    +N    LP  ++P Q ++  I       ++ A EI   LK
Sbjct: 258 YQTSWGVSTRLLGAIIMVHGDNNGLVLPPRVAPTQVMIIPIQQQKAGVLDKAYEIEKQLK 317

Query: 577 SHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL- 635
              + ++ D  +++  +K  E  ++ +P+ +  G K+    +  I +    T +K +L  
Sbjct: 318 EAGIRVKVDASDKSPGWKFSEAEMRGVPLRLEIGPKDIENNACVIAKRNDGTKEKYALDQ 377

Query: 636 DAIPILT 642
           + I  + 
Sbjct: 378 ELINTIK 384


>gi|324324493|gb|ADY19753.1| prolyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 476

 Score =  178 bits (452), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 83/429 (19%), Positives = 168/429 (39%), Gaps = 60/429 (13%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           E  Q +  +EE   + +  + ++ +L   +    G +     G+ +++ +   M  K+K 
Sbjct: 4   EQVQAITKMEEDFAQWYTDIVKKAELVDYSSVK-GCMILRPYGYALWENMQKVMDEKLKA 62

Query: 290 -DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
             +E +  P  + + L  ++  H + +   +  V    D     R   ++P +       
Sbjct: 63  TGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGDEKLAER-LCIRPTSETLFCEH 121

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH-VFCTKEQMFNECLK 406
           F+  ++SY +LP    ++ SV R E   +    +R   F   + H +  T E+   E L 
Sbjct: 122 FSKIVQSYNDLPKLYNQWCSVVRWEK--TTRPFLRTTEFLWQEGHTIHETAEESQAETLN 179

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           I NL  S  +D+    ++    T  EK  G+ A +                         
Sbjct: 180 ILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKATY------------------------- 214

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
                        E ++ D  G+  Q GT      N    F+  +++   +  +   +H+
Sbjct: 215 -----------TIESLMHD--GKALQTGTSHNFGTNFSEAFDIKFLDRTGKWQY---VHQ 258

Query: 526 AVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSH 578
             +G   R IG +I    +N    +P  ++P+Q ++  I       +  A E+   ++  
Sbjct: 259 TSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLAKAIELQGHIQKV 318

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS---LL 635
              ++ D  N+T  +K  E+ +K IPI +  G K+  +  + + R  +   + +S   L 
Sbjct: 319 -ARVKIDASNKTPGWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEKEFISMDQLE 377

Query: 636 DAIPILTKE 644
           + IP L +E
Sbjct: 378 ERIPALLEE 386


>gi|291522045|emb|CBK80338.1| prolyl-tRNA synthetase, family I [Coprococcus catus GD/7]
          Length = 477

 Score =  178 bits (452), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 71/389 (18%), Positives = 138/389 (35%), Gaps = 60/389 (15%)

Query: 270 RKGWKIFQTLISYMRRKIKDDYEE-INTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDT 327
             G+ I++ +   + ++ K    E +  P  + + L  ++  H + +   +  V      
Sbjct: 45  PAGYAIWENIQHELDKRFKATGVENVYMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGLN 104

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
               R   ++P +       +   ++SYR+LP    ++ SV R E        +R R F 
Sbjct: 105 ELQER-MCVRPTSETLFCDFYAKEIQSYRDLPKMYNQWCSVVRWEK--ETRPFLRSREFL 161

Query: 388 QDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
             + H    T E+      ++ NL     +      ++    T  EK  G++A +     
Sbjct: 162 WQEGHTAHATAEESKERTEQMLNLYADFCEQVLAMPVIRGQKTEKEKFAGAEATY----- 216

Query: 447 IMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSR 505
                                            E ++ D  G+  Q GT           
Sbjct: 217 -------------------------------TIEALMHD--GKALQSGTSHNFGDGFARA 243

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI- 560
           F   Y +  ++  +   +H+  +G   R IG +I    ++    LP  ++P Q IV  I 
Sbjct: 244 FGIQYTDKENKLQY---VHQTSWGMTTRLIGAIIMVHGDDNGLVLPPMIAPTQVIVIPIA 300

Query: 561 --TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERS 618
                 +E A+E+ + L      ++ D  +    +K  E  ++ IP+ +  G K+     
Sbjct: 301 QHKEGVLEKAEELRDRLS--GFRVKLDATDNKPGWKFAEAEMRGIPVRVEIGPKDIEANQ 358

Query: 619 IGIRRFGSTTTQKVSLLDA---IPILTKE 644
             + R  +     VSL +    +  L KE
Sbjct: 359 AVLARRDTGEKIVVSLDELETKVDELLKE 387


>gi|222094191|ref|YP_002528248.1| prolyl-tRNA synthetase [Bacillus cereus Q1]
 gi|221238246|gb|ACM10956.1| proline--tRNA ligase (prolyl-tRNA synthetase) [Bacillus cereus Q1]
          Length = 476

 Score =  178 bits (452), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 82/429 (19%), Positives = 168/429 (39%), Gaps = 60/429 (13%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           E  Q +  +EE   + +  + ++ +L   +    G +     G+ +++ +   M  K+K 
Sbjct: 4   EQVQAITKMEEDFAQWYTDIVKKAELVDYSSVK-GCMILRPYGYALWENMQKVMDEKLKA 62

Query: 290 -DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
             +E +  P  + + L  ++  H + +   +  V    D     R   ++P +       
Sbjct: 63  TGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGDEKLAER-LCIRPTSETLFCEH 121

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH-VFCTKEQMFNECLK 406
           F+  ++SY +LP    ++ SV R E   +    +R   F   + H +  T E+   E L 
Sbjct: 122 FSKIVQSYNDLPKLYNQWCSVVRWEK--TTRPFLRTTEFLWQEGHTIHETAEESQAETLN 179

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           I NL  S  +D+    ++    T  EK  G+ A                           
Sbjct: 180 ILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKATH------------------------- 214

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
                        E ++ D  G+  Q GT      N    F+  +++ + +  +   +H+
Sbjct: 215 -----------TIESLMHD--GKALQTGTSHNFGTNFSEAFDIKFLDRNGKWQY---VHQ 258

Query: 526 AVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSH 578
             +G   R IG +I    +N    +P  ++P+Q ++  I       +  A E+   ++  
Sbjct: 259 TSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLAKATELQGHIQKV 318

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS---LL 635
              ++ D  N+T  +K  E+ +K IPI +  G K+  +  + + R  +   + ++   L 
Sbjct: 319 -ARVKIDASNKTPGWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEKEFIAMDQLE 377

Query: 636 DAIPILTKE 644
           + IP L +E
Sbjct: 378 ERIPALLEE 386


>gi|332655151|ref|ZP_08420892.1| proline--tRNA ligase [Ruminococcaceae bacterium D16]
 gi|332516011|gb|EGJ45620.1| proline--tRNA ligase [Ruminococcaceae bacterium D16]
          Length = 480

 Score =  178 bits (452), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 73/435 (16%), Positives = 168/435 (38%), Gaps = 62/435 (14%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
             ++  + +  +E    + +  + ++ +L   +    GV  +   G+ I++ + + + ++
Sbjct: 4   NNKKQVEQITDMEVDFAQWYTDVCKKAELIDYSSIK-GVFIYRPYGYAIWENIQAELDKR 62

Query: 287 IKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
            K+  +E +  P ++ + L  ++  H + +      V        + R + ++P +    
Sbjct: 63  FKETGHENVYLPMLIPESLLQKEKDHVEGFAPECAWVTYGGSEKLEER-YCIRPTSETLF 121

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNE 403
              +   + S+R+LP    ++ SV R E +      +R R F   + H    T+E+   E
Sbjct: 122 CEHYKSIIHSHRDLPKLYNQWCSVLRWEKTS--RPFLRHREFLWQEGHTMHATEEEARQE 179

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             ++ N+     ++     ++    T  EK  G++  +                      
Sbjct: 180 TQQMLNIYADFLENVLAMPVVKGRKTDKEKFNGAEETY---------------------- 217

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSR-FNAFYVNSHSEKCHPVM 522
                           E ++ D   +  Q GT     +  +R F+  +    ++  +P  
Sbjct: 218 --------------TVECMMHD--KKALQSGTSHYFGDGFARAFDITFTGKDNQLHYP-- 259

Query: 523 IHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTI---TSSAVEYAQEIANLL 575
            H+  +G   R IG +I     N    LP  ++PIQA+V  +       ++ A ++ N L
Sbjct: 260 -HQTSWGVSTRMIGGIIMTHGDNNGLVLPPRIAPIQAMVIPVAQHKEGVLDAATDLLNRL 318

Query: 576 KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
           K+  +    D  ++++ +K  ++ +K +P+ +  G K+  +    I R  S     V L 
Sbjct: 319 KAAGIRASMDASDQSMGWKAAQYEMKGVPLRVEIGPKDMEKGQCCICRRDSGEKIFVPLA 378

Query: 636 DAIPILTKESLPPDC 650
           +       E+  P  
Sbjct: 379 EL------ETTVPQL 387


>gi|196034766|ref|ZP_03102174.1| prolyl-tRNA synthetase [Bacillus cereus W]
 gi|195992809|gb|EDX56769.1| prolyl-tRNA synthetase [Bacillus cereus W]
          Length = 476

 Score =  178 bits (451), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 82/429 (19%), Positives = 168/429 (39%), Gaps = 60/429 (13%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           E  Q +  +EE   + +  + ++ +L   +    G +     G+ +++ +   M  K+K 
Sbjct: 4   EQVQAITKMEEDFAQWYTDIVKKAELVDYSSVK-GCMILRPYGYALWENMQKVMDEKLKA 62

Query: 290 -DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
             +E +  P  + + L  ++  H + +   +  V    D     R   ++P +       
Sbjct: 63  TGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGDEKLAER-LCIRPTSETLFCEH 121

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH-VFCTKEQMFNECLK 406
           F+  ++SY +LP    ++ SV R E   +    +R   F   + H +  T E+   E L 
Sbjct: 122 FSKIVQSYNDLPKLYNQWCSVVRWEK--TTRPFLRTTEFLWQEGHTIHETAEESQAETLN 179

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           I NL  S  +D+    ++    T  EK  G+ A +                         
Sbjct: 180 ILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKATY------------------------- 214

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
                        E ++ D  G+  Q GT      N    F+  +++   +  +   +H+
Sbjct: 215 -----------TIESLMHD--GKALQTGTSHNFGTNFSEAFDIKFLDRTGKWQY---VHQ 258

Query: 526 AVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSH 578
             +G   R IG +I    +N    +P  ++P+Q ++  I       +  A E+   ++  
Sbjct: 259 TSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLAKAIELQGHIQKV 318

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL--- 635
              ++ D  N+T  +K  E+ +K IPI +  G K+  +  + + R  +   + +S+    
Sbjct: 319 -ARVKIDASNKTPGWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEKEFISMDQLG 377

Query: 636 DAIPILTKE 644
           + IP L +E
Sbjct: 378 ERIPALLEE 386


>gi|268610123|ref|ZP_06143850.1| prolyl-tRNA synthetase [Ruminococcus flavefaciens FD-1]
          Length = 480

 Score =  178 bits (451), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 72/434 (16%), Positives = 162/434 (37%), Gaps = 57/434 (13%)

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR 284
               ++L   +  ++E   + +  + ++ +L         ++     G+ I++ +   + 
Sbjct: 1   MAKDKKLVTEITSMDEDFAQWYTDICKKAELIEYTSVKGCMVI-RPYGYAIWENIQRILD 59

Query: 285 RKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
              K+  +E +  P  + + L  ++  H + +   +  V    +   + R   ++P +  
Sbjct: 60  TTFKETGHENVCMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGNEKLEDR-LCVRPTSET 118

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN 402
                +++ + SYR+LP    ++ SV R E   +    +R R F   + H          
Sbjct: 119 LFCEHYSNIIHSYRDLPKLYNQWVSVVRWEK--TTRPFLRSREFLWQEGHTIH---ATAE 173

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
           E ++    ++++Y DF                          E  +   +   K +  D+
Sbjct: 174 EAIEETERMLNVYADF-------------------------CEKSLAMPVVKGKKTESDK 208

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPV 521
                    GA      E ++ D  G+  Q GT           F   Y +  +++ +P 
Sbjct: 209 F-------AGAVSTYAIEALMHD--GKALQAGTSHYFGDGFAKAFGIEYTDKENKRVNP- 258

Query: 522 MIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTI---TSSAVEYAQEIANL 574
             H+  +G   R IG +I     N    LP  ++P+Q ++  I       ++ A E+   
Sbjct: 259 --HQTSWGVTTRLIGAVIMTHGDNSGLVLPPAVAPVQVVIVPIAQHKEGVLDKANELLER 316

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           LK   + ++ D  + +  +K  E+ +K +P+ +  G ++  E    I    +      SL
Sbjct: 317 LKKAGVRVKLDDTDNSPGWKFAEYEMKGVPLRVEIGPRDIEENKCIIASRWNGEKADFSL 376

Query: 635 LD---AIPILTKES 645
            +   A+    +E+
Sbjct: 377 DELESAVAQKLQEA 390


>gi|225571168|ref|ZP_03780166.1| hypothetical protein CLOHYLEM_07256 [Clostridium hylemonae DSM
           15053]
 gi|225159999|gb|EEG72618.1| hypothetical protein CLOHYLEM_07256 [Clostridium hylemonae DSM
           15053]
          Length = 480

 Score =  178 bits (451), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 73/439 (16%), Positives = 163/439 (37%), Gaps = 58/439 (13%)

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR 284
              +++L + +   +E   + +  + RE +L   +    G + +   G+ I++ + + + 
Sbjct: 1   MAKEKKLVENITPRDEDFAQWYTDVVREAELCDYSSVK-GCLNYLPNGYAIWELIQADLD 59

Query: 285 RKIKDDYEE-INTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
           ++ K+   E +  P ++ ++L + ++ H + +   +  V          R   ++P +  
Sbjct: 60  KRFKETGVENVYLPTLIPENLLEKEADHVEGFAPEVAWVTHGGMERLQER-LCIRPTSET 118

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMF 401
               +++  ++SYR+LP    ++ SV R E   +    +R R F   + H    T E+  
Sbjct: 119 LFCDLWSKTVQSYRDLPKVWNQWNSVLRWEK--TTRPFLRSREFLWQEGHTLHATYEEAE 176

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
              +++ ++    YK+      +       EK  G                         
Sbjct: 177 ERTIQMFHVYEDCYKETLAIPFVSGRKAEHEKFAG------------------------- 211

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHP 520
                      A      E ++ D  G+  Q  T        P  F+  YV+ +++    
Sbjct: 212 -----------AQDTYTIEALMHD--GKALQSATSHFFGSGFPDAFDIKYVDKNNQLHSA 258

Query: 521 VMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIAN 573
                  +G   R IG +I    ++    LP  ++P++  +  I       ++ A  + +
Sbjct: 259 YE---TSWGWSTRSIGAIIMVHGDDSGLVLPPHVAPVECRIIPIAQHKEGVLDRANVLLD 315

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            LK     ++ D   ++  +K  E  +  IP  I  G K+  +  + + R  +     VS
Sbjct: 316 ELKKAGYRVKIDDSEKSPGWKFSEQEMLGIPTRIEIGPKDIEKNQVVVVRRDTREKIIVS 375

Query: 634 LLDAIPILTK--ESLPPDC 650
           L +    L    E++  D 
Sbjct: 376 LDEIATKLRDILETIQEDM 394


>gi|260437797|ref|ZP_05791613.1| proline--tRNA ligase [Butyrivibrio crossotus DSM 2876]
 gi|292809821|gb|EFF69026.1| proline--tRNA ligase [Butyrivibrio crossotus DSM 2876]
          Length = 479

 Score =  178 bits (451), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 69/417 (16%), Positives = 151/417 (36%), Gaps = 56/417 (13%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEE-INT 296
           ++    + +  + ++ +L   +    G + +   G+ I++ + + + ++ K+   E +  
Sbjct: 14  MDVDFAQWYTDVVKKAELMGYSSVK-GCMIFKPAGYAIWENIKAELDKRFKETGVENVYM 72

Query: 297 PQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P  + + L Q +  H + +   +  V          R   ++P +       +   ++SY
Sbjct: 73  PMFIPESLLQREKDHVEGFAPEVAWVTYGGLNPLQER-MCVRPTSETLFCDFYKDEIQSY 131

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN-ECLKIHNLIISI 414
           R+LP    ++ SV R E        +R R F   + H      +       ++ NL    
Sbjct: 132 RDLPKVYNQWCSVVRWEK--ETRPFLRSREFLWQEGHTAHATAEEAEARTQQMLNLYADF 189

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            +DF    ++    T  EK  G++A +                                 
Sbjct: 190 CEDFLAIPVVRGRKTDKEKFAGAEATY--------------------------------- 216

Query: 475 YGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
                E ++ D  G+  Q GT           F   Y +  ++  +   +H+  +G   R
Sbjct: 217 ---TIEALMHD--GKALQSGTSHNFGDGFAKAFGIQYTDKDNKLKY---VHQTSWGMTTR 268

Query: 534 FIGIMI----ENFKGNLPLWLSPIQAIVTTITSS---AVEYAQEIANLLKSHHLSIETDF 586
            IG +I    ++    LP  ++P+Q  +  +       +E A E+   L    L ++ D 
Sbjct: 269 LIGALIMVHGDDSGLVLPPRVAPVQVDIIPVMQKKAGVLEKAAEVKEKLIKAGLRVKVDD 328

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            ++   +K  E  ++ IP+ I  G ++       I R  +     VS+ +    + +
Sbjct: 329 SDKNPGWKFSEQEMRGIPVRIEMGPRDIEANQAVIVRRDTREKTVVSIDELDVKVKE 385


>gi|260585028|ref|ZP_05852770.1| proline--tRNA ligase [Granulicatella elegans ATCC 700633]
 gi|260157224|gb|EEW92298.1| proline--tRNA ligase [Granulicatella elegans ATCC 700633]
          Length = 482

 Score =  178 bits (451), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 69/427 (16%), Positives = 151/427 (35%), Gaps = 58/427 (13%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTL-ISYMRRKIKD 289
           + +      E   + + +  ++ DL   +    G + +   G++I++ +   + RR  ++
Sbjct: 1   MAEKTNLQREDFSKWYIQTIQKADLMDYSPVR-GCMIFKPDGYEIWEHIQEEFNRRFKEE 59

Query: 290 DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
                  P ++ +  + +++ H + +   +  V  A     + R  AL+P +       F
Sbjct: 60  GIRNAYFPMLIPESFFTKEADHIEGFAPELPWVTEAAGEKLEER-LALRPTSETMIGTAF 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE-CLKI 407
           ++ + SYR+LP  + ++ +V+R E        +R   F   + H     E       +K+
Sbjct: 119 SNWINSYRDLPYEVNQWANVFRWEKK--TLPFLRTSEFLWQEGHTAHADEADARRRTMKM 176

Query: 408 HNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGV 467
            ++   + +      +     T  E+  G                               
Sbjct: 177 LDIYKEVVEGVLAVPVYEGQKTPSERFAG------------------------------- 205

Query: 468 LLGEGAFYGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
                A      E ++KD  G+  Q GT           F+  Y+   +E    V  H  
Sbjct: 206 -----AVDTYSIEAMMKD--GKAVQAGTSHYMGTKFAEAFDIKYLTKENE---HVHAHTT 255

Query: 527 VFGSIERFIGIMIENFKGNLPLWL----SPIQAIVTTI-----TSSAVEYAQEIANLLKS 577
            +G   R IG +I        L L    +P Q ++  +       + +E  +E+   LK+
Sbjct: 256 SWGVSTRLIGSLIMTHGDEQGLVLPPKVAPTQVVLIPVGPWKKNPAILEKLEELQQQLKA 315

Query: 578 HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
             L ++ D  + +  +K  E  ++ +P+ I CG ++     +  +         V     
Sbjct: 316 AGLRVKIDDTDNSPGFKFNEWELRGVPMRIECGPRDLENNQVMTKMRDLDEKVAVGFDVL 375

Query: 638 IPILTKE 644
           +  +  E
Sbjct: 376 LETIQSE 382


>gi|238916041|ref|YP_002929558.1| prolyl-tRNA synthetase [Eubacterium eligens ATCC 27750]
 gi|259511595|sp|C4Z1D7|SYP_EUBE2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|238871401|gb|ACR71111.1| prolyl-tRNA synthetase [Eubacterium eligens ATCC 27750]
          Length = 479

 Score =  178 bits (451), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 71/415 (17%), Positives = 153/415 (36%), Gaps = 56/415 (13%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEE-INT 296
           ++E   + +  + ++ +L   +    G + +   G+ I++ + + M R+ K+   E +  
Sbjct: 14  MKEDFAQWYTDVCKKAELMSYSSVK-GCMIFKPAGYAIWENIKNEMDRRFKETGVENVYL 72

Query: 297 PQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P  + + L + +  H + +   +  V          R   ++P +       +   ++SY
Sbjct: 73  PMFIPESLLEVEKDHVEGFAPEVAWVTYGGLNPLQER-MCVRPTSETLFCDFYKDEIQSY 131

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA-HVFCTKEQMFNECLKIHNLIISI 414
           R+LP    ++ SV R E        +R R F   +      T E+      ++ NL    
Sbjct: 132 RDLPKVYNQWCSVVRWEK--ETRPFLRSREFLWQEGHTAHATAEEAEARTQQMLNLYADF 189

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            ++     ++    T  EK  G++A +                                 
Sbjct: 190 CEEVLAIPVIKGRKTDKEKFAGAEATY--------------------------------- 216

Query: 475 YGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
                E ++ D  G+  Q GT           F   Y +  ++  +   +H+  +G+  R
Sbjct: 217 ---TIEALMHD--GKALQSGTSHNFGDGFAKAFGIQYTDKDNKLKY---VHQTSWGTTTR 268

Query: 534 FIGIMIENFKGN----LPLWLSPIQAIVTTITSS---AVEYAQEIANLLKSHHLSIETDF 586
            IG +I     +    LP  ++P+Q  V  I       ++ A E+   LK+  L ++ D 
Sbjct: 269 LIGAVIMTHGDDSGLVLPPKVAPVQVDVIPIMQKKAGVLDKAYEVGQALKAAGLRVKVDD 328

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            ++   +K  E  ++ IP+ +  G ++       I R  +     VS+ +    +
Sbjct: 329 SDKNPGWKFSEQEMRGIPVRVEMGPRDIEANQAVIVRRDTREKITVSIDELADRI 383


>gi|169828364|ref|YP_001698522.1| prolyl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
 gi|168992852|gb|ACA40392.1| Prolyl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
          Length = 483

 Score =  178 bits (450), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 71/424 (16%), Positives = 156/424 (36%), Gaps = 58/424 (13%)

Query: 234 YLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYE 292
            +    E   + + +  ++ DL        G I +   G++I++ +   M R+ KD  + 
Sbjct: 5   TMSKQLEDFSKWYIETIQKADLMDYTPVR-GCIAFKPDGYEIWEHIQEEMDRRFKDTGHR 63

Query: 293 EINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
               P ++ +  + ++  H + +   +  V  A     + R  AL+P +      ++++ 
Sbjct: 64  NAYFPMLIPESFFQKEKDHIEGFSPELPWVTEAAGEKLEER-LALRPTSETMIGHLYSNW 122

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN-ECLKIHNL 410
           +KSYR+LPV + ++ +V+R E        +R   F   + H     E+    E +++ ++
Sbjct: 123 IKSYRDLPVLINQWANVFRWEKK--TLPFIRTSEFLWQEGHTAHIDEEDARKETMQMLDI 180

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
              + +      +     T  E+  G                                  
Sbjct: 181 YKEVVEQVLAIPVYDGQKTPSERFAG---------------------------------- 206

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG 529
             A      E ++K+  G+  Q GT           FN  Y+N  ++  +   +H   +G
Sbjct: 207 --AVDTYSIEAMMKN--GKAVQAGTSHYLGTKFAEAFNIKYLNKANQHEY---VHTTSWG 259

Query: 530 SIERFIGIMIENFKGNL----PLWLSPIQAIVTTI-----TSSAVEYAQEIANLLKSHHL 580
           +  R IG +I           P  ++P Q ++  +         +E    I   LK+  +
Sbjct: 260 TSTRLIGSVIMVHGDEQGLILPPRIAPTQVVLIPVGPWKKNPQIMEQLDAIFAALKAKGI 319

Query: 581 SIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
            +  D  +++  +K  E  +K +P+ I  G ++       ++       Q + L   +  
Sbjct: 320 RVRLDDSDQSPGFKFNEWELKGVPVRIELGPRDLENNQALLKARDEDEKQTIELATVVAA 379

Query: 641 LTKE 644
           + +E
Sbjct: 380 IEEE 383


>gi|91761979|ref|ZP_01263944.1| prolyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1002]
 gi|91717781|gb|EAS84431.1| prolyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1002]
          Length = 444

 Score =  178 bits (450), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 82/456 (17%), Positives = 166/456 (36%), Gaps = 51/456 (11%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        E++ + H+ + R      I +  +G+  W   G+K+ + +   +R +
Sbjct: 4   SKSFIPILKNNPSEAKIKSHQLMLRVGM---IKQSSAGIYSWLPLGFKVMKKIEQIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
                 +EI  P +    +W++SG +D Y   M  +K      +  R     P N     
Sbjct: 61  QNTIGAQEILMPTIQPSDIWKESGRYDDYGDEMLRIKD-----RQGREMLYGPTNEELVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNEC 404
            +F   +KSY+ LP  L      +R+E      G+MR R F   DA+ F    E      
Sbjct: 116 DIFRSSVKSYKSLPQLLYHIQWKFRDEVRPRF-GIMRGREFYMKDAYSFDVNDEDATFSY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA-------------------- 444
            K     +  +K      I +   T P     S      A                    
Sbjct: 175 NKFFFSYLKTFKRLELSAIPMAADTGPIGGNLSHEFIILADTGESKIFTDKRVFDLGSEG 234

Query: 445 ENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIG---RDWQCGTIQVDFN 501
             + +  L  ++   +        + +  F   +FE  + +      +  + G I    +
Sbjct: 235 TVLDRQSLQDLRKKYEQY----YAVADEKFNKNEFEEKVSEENRLITKGIEVGHIFYFGD 290

Query: 502 LPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE------NFKGNLPLWLSPIQA 555
             S+     V+    K   V +     G   R +G +IE      +     P  ++P + 
Sbjct: 291 KYSKALNAAVDLPGGKKDFVKMGSYGIGVS-RLVGAIIEAKYDQKDEIMKWPFSVAPYEL 349

Query: 556 IVTTITSS----AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
            +  + +     A++ A ++    +S ++    D  +E ++ KI++ ++  +P  II G 
Sbjct: 350 AIIPMINKNDTSALDKANKLFKHFESKNIDTIIDDMDENLSSKIKKFNLIGVPYQIILG- 408

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLP 647
           K + +  +  +  G    + ++L     ILT++ L 
Sbjct: 409 KNSEDNLLEFKEIG-KDPKSLTLDQITQILTEQKLK 443


>gi|71083600|ref|YP_266319.1| prolyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1062]
 gi|114152227|sp|Q4FM73|SYP_PELUB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|71062713|gb|AAZ21716.1| proline-tRNA ligase [Candidatus Pelagibacter ubique HTCC1062]
          Length = 444

 Score =  178 bits (450), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 82/456 (17%), Positives = 166/456 (36%), Gaps = 51/456 (11%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        E++ + H+ + R      I +  +G+  W   G+K+ + +   +R +
Sbjct: 4   SKSFIPILKNNPSEAKIKSHQLMLRVGM---IKQSSAGIYSWLPLGFKVMKKIEQIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
                 +EI  P +    +W++SG +D Y   M  +K      +  R     P N     
Sbjct: 61  QNKIGAQEILMPTIQPSDIWKESGRYDDYGDEMLRIKD-----RQGREMLYGPTNEELVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNEC 404
            +F   +KSY+ LP  L      +R+E      G+MR R F   DA+ F    E      
Sbjct: 116 DIFRSSVKSYKSLPQLLYHIQWKFRDEVRPRF-GIMRGREFYMKDAYSFDVNDEDATFSY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA-------------------- 444
            K     +  +K      I +   T P     S      A                    
Sbjct: 175 NKFFFSYLKTFKRLELSAIPMAADTGPIGGNLSHEFIILADTGESKIFTDKRVFDLGSEG 234

Query: 445 ENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIG---RDWQCGTIQVDFN 501
             + +  L  ++   +        + +  F   +FE  + +      +  + G I    +
Sbjct: 235 TVLDRQSLQDLRKKYEQY----YAVADEKFNKNEFEEKVSEENRLITKGIEVGHIFYFGD 290

Query: 502 LPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE------NFKGNLPLWLSPIQA 555
             S+     V+    K   V +     G   R +G +IE      +     P  ++P + 
Sbjct: 291 KYSKALNAAVDLPGGKKDFVKMGSYGIGVS-RLVGAIIEAKYDQKDEIMKWPFSVAPYEL 349

Query: 556 IVTTITSS----AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
            +  + +     A++ A ++    +S ++    D  +E ++ KI++ ++  +P  II G 
Sbjct: 350 AIIPMINKNDTSALDKANKLFKHFESKNIDTIIDDMDENLSSKIKKFNLIGVPYQIILG- 408

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLP 647
           K + +  +  +  G    + ++L     ILT++ L 
Sbjct: 409 KNSEDNLLEFKEIG-KDPKSLTLDQITQILTEQKLK 443


>gi|88608761|ref|YP_506256.1| prolyl-tRNA synthetase [Neorickettsia sennetsu str. Miyayama]
 gi|114152220|sp|Q2GE40|SYP_NEOSM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|88600930|gb|ABD46398.1| prolyl-tRNA synthetase [Neorickettsia sennetsu str. Miyayama]
          Length = 436

 Score =  178 bits (450), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 80/453 (17%), Positives = 152/453 (33%), Gaps = 63/453 (13%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  L        E + R H+   R      + + G+G+  W   G K+ + + S +R++
Sbjct: 8   SEYYLPLMKNVSGEVKLRSHKYSLRAG---LVKQCGAGLYSWLPLGLKVLRNIESVIRQE 64

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P +    LW++SG +  Y   +   K   D           P N     
Sbjct: 65  LDSMGMHEMLMPCIQLAKLWEESGRYSDYGKELLKFKDRHDN-----ELLFGPTNEEVIT 119

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           A+    L SY++LP  L      +R+E      GLMR R F   DA+ F   +Q      
Sbjct: 120 AIVRDDLASYKQLPKILYHIQWKFRDEIRPRF-GLMRAREFLMKDAYSFDVDQQSARISY 178

Query: 406 -KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            K++   + I+K  G   I  + +        +                      + +I 
Sbjct: 179 NKVYQSYLRIFKRLGLNPIPCRANAGVIGGSLNHEFHITTTE-----------GGEGKIF 227

Query: 465 TGVLLGEGAFYGPKFEYILKDA----------------------IGRDWQCGTIQ----- 497
               +GE      K +   + A                      IG D +  T Q     
Sbjct: 228 YPEEMGELVDEFCKIDPSNEHAVSVMTEKLQELFCFTEECNSSGIGNDNRICTAQGIEVG 287

Query: 498 ----VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNLPLWL-- 550
                     +   A +     +K +  M    +   I R +  +IE +      +W   
Sbjct: 288 HIFLFGEKYSAPMQARFSGRDGKKKNFYMGSYGI--GISRLLAAIIEVHSDDKGIIWPES 345

Query: 551 -SPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIIC 609
            +P +  +  +   +  +A+EI + L S    +  D   ++   K     +  +P  II 
Sbjct: 346 IAPFKIGLINLHGESCGFAEEIFSKLDS----VIYDDTADSQGVKFARMDLIGVPFQIIV 401

Query: 610 GDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           G       +I ++    +  +  SL + + + +
Sbjct: 402 GKNGPIHGTIELKYRLDSKRESRSLNELVSLFS 434


>gi|291543417|emb|CBL16526.1| prolyl-tRNA synthetase [Ruminococcus sp. 18P13]
          Length = 485

 Score =  178 bits (450), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 73/430 (16%), Positives = 162/430 (37%), Gaps = 56/430 (13%)

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR 284
               ++L + +  ++E   + +  + ++ +L         ++      + I++ +   + 
Sbjct: 1   MAKDKKLVESITSMDEDFAQWYTDIVKKAELIEYTSVKGCMVI-RPYAYAIWENIQHILD 59

Query: 285 RKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
              K   +E +  P  + + L  ++  H + +   +  V        + R   ++P +  
Sbjct: 60  GMFKATGHENVCMPMFIPESLLQKEKDHVEGFAPEVAWVTMGGSEKLEDR-LCVRPTSET 118

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMF 401
                + + + SYR+LP    ++ SV R E   +    +R R F   + H    T ++  
Sbjct: 119 LFCEHYANIVHSYRDLPKLYNQWVSVVRWEK--TTRPFLRSREFLWQEGHTIHATAQEAI 176

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E  ++ N+     +      ++    T  +K  G+ A +                    
Sbjct: 177 EETERMLNVYADFCEHSLAMPVIKGRKTESDKFAGAVATY-------------------- 216

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHP 520
                             E ++ D  G+  Q GT           F+  Y +  +++ +P
Sbjct: 217 ----------------AIEALMHD--GKALQAGTSHYFGDGFAKAFDIEYTDKENKRVNP 258

Query: 521 VMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTI---TSSAVEYAQEIAN 573
              H+  +G   R IG +I     N    LP  ++PIQA++  I       +E A ++A 
Sbjct: 259 ---HQTSWGVTTRLIGAIIMTHGDNSGLVLPPAVAPIQAVIVPIAQHKEGVLEKANQLAE 315

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            LK+  + ++ D  + +  +K  E+ +K +P+ I  G K+  +    +    +   Q V+
Sbjct: 316 ALKAQGIRVKLDDSDNSPGWKFAEYEMKGVPVRIEIGPKDIEQSQCIVATRYNGEKQPVA 375

Query: 634 LLDAIPILTK 643
           L +A   L +
Sbjct: 376 LDEAYGTLVQ 385


>gi|167759625|ref|ZP_02431752.1| hypothetical protein CLOSCI_01983 [Clostridium scindens ATCC 35704]
 gi|167662751|gb|EDS06881.1| hypothetical protein CLOSCI_01983 [Clostridium scindens ATCC 35704]
          Length = 480

 Score =  178 bits (450), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 69/430 (16%), Positives = 159/430 (36%), Gaps = 56/430 (13%)

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR 284
              +++L + +   +E   + +  + RE +L   +    G + +   G+ I++ + + + 
Sbjct: 1   MAKEKKLVESITPRDEDFAQWYTDVVREAELCDYSSVK-GCLNYLPNGYAIWELIQADLD 59

Query: 285 RKIKDDYEE-INTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
           ++ K+   E +  P ++ + L + ++ H + +   +  V          R   ++P +  
Sbjct: 60  KRFKETGVENVYLPTLIPESLLEKEADHIEGFAPEVAWVTHGGMERLQER-LCIRPTSET 118

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMF 401
               ++   ++SYR+LP    ++ +V R E   +    +R R F   + H    T E+  
Sbjct: 119 LFCDLWAKTVQSYRDLPKVWNQWNTVLRWEK--TTRPFLRSREFLWQEGHTIHATYEEAE 176

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
              +++ ++    YK+      +       EK  G                         
Sbjct: 177 ERTIQMLHVYEDCYKETLAIPFVSGRKAEHEKFAG------------------------- 211

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHP 520
                      A      E ++ D  G+  Q  T        P  F   YV+ +++    
Sbjct: 212 -----------AQDTYTIEALMHD--GKALQSATSHFFGSGFPDAFGIKYVDKNNQLQS- 257

Query: 521 VMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIAN 573
             ++   +G   R IG +I    ++    LP  ++P++  +  I       ++ +  + +
Sbjct: 258 --VYETSWGWSTRSIGALIMVHGDDSGLVLPPHVAPVECRIIPIAQHKEGVLDRSFALLD 315

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            LK     ++ D  +++  +K  E  +  IP  I  G K+  +  + + R  +     VS
Sbjct: 316 ELKKAGYRVKIDDSDKSTGWKFSEQEMLGIPTRIEIGPKDIEKNQVVVVRRDNREKIVVS 375

Query: 634 LLDAIPILTK 643
           L +    L  
Sbjct: 376 LDEIAVKLRD 385


>gi|167756667|ref|ZP_02428794.1| hypothetical protein CLORAM_02205 [Clostridium ramosum DSM 1402]
 gi|167702842|gb|EDS17421.1| hypothetical protein CLORAM_02205 [Clostridium ramosum DSM 1402]
          Length = 479

 Score =  178 bits (450), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 69/426 (16%), Positives = 159/426 (37%), Gaps = 57/426 (13%)

Query: 228 QQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI 287
             +    +  +E+   + +  + R+ +L   +    G I +    + +++ +  YM ++ 
Sbjct: 3   NNKKNDAITAMEDDFAQWYTDVCRKAELMDYSSVK-GFIIYRPYSYAMWEAIQQYMDKRF 61

Query: 288 KD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           K+  +E +  P ++ Q L  ++S H + +      V        +     ++P +     
Sbjct: 62  KETGHENVYMPMLIPQSLLQKESDHVEGFAPECAIVTKGGLDDLE-ENLIIRPTSETLFC 120

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN-EC 404
             +   + SYR+LP    ++ SV R E   +    +R   F   + H     E     E 
Sbjct: 121 EHYAKIVNSYRDLPKLYNQWCSVVRWEK--TTRPFLRGSEFLWQEGHTVHASETEARAET 178

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
           L++  +     K+     ++    T  EK  G++  +                       
Sbjct: 179 LQMLEIYEDTAKNLLAIPMLTGRKTEREKFAGAEETY----------------------- 215

Query: 465 TGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFN-LPSRFNAFYVNSHSEKCHPVMI 523
                          E ++ D  G+  Q GT           F+  +++  ++  +   +
Sbjct: 216 -------------TIEALMHD--GKALQSGTSHYFGQGFAKAFDMKFLSKENKLEY---V 257

Query: 524 HRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITS---SAVEYAQEIANLLK 576
           ++  +G   R +G +I    +N    LP  ++P Q ++  I       ++ A EI   LK
Sbjct: 258 YQTSWGVSTRLLGAIIMVHGDNNGLVLPPRVAPTQVMIIPIQQQKAGVLDKAYEIEKQLK 317

Query: 577 SHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL- 635
              + ++ D  +++  +K  E  ++ +P+ +  G K+    +  I +    T +K +L  
Sbjct: 318 EAGIRVKVDASDKSPGWKFSEAEMRGVPLRLEIGPKDIENNACVIAKRNDGTKEKYALDQ 377

Query: 636 DAIPIL 641
           + I  +
Sbjct: 378 ELINTI 383


>gi|15897489|ref|NP_342094.1| prolyl-tRNA synthetase [Sulfolobus solfataricus P2]
 gi|284174806|ref|ZP_06388775.1| prolyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
 gi|74581610|sp|Q9UWX2|SYP_SULSO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|6015904|emb|CAB57731.1| prolyl (glutamyl) tRNA synthetase [Sulfolobus solfataricus P2]
 gi|13813734|gb|AAK40884.1| Prolyl -tRNA synthetase (proS) [Sulfolobus solfataricus P2]
 gi|261602249|gb|ACX91852.1| prolyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
          Length = 481

 Score =  178 bits (450), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 86/442 (19%), Positives = 167/442 (37%), Gaps = 64/442 (14%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           +        ++       + RE + +        G+  W   G+K+ Q +I  +R  +  
Sbjct: 1   MQITREKWSKNFSEWFDWVLREGEFYDYGRYPIKGMGVWMPYGFKLRQNIIGIIRNFLDS 60

Query: 290 -DYEEINTPQVLDQHL-WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
             +EE+  P ++ + L  ++S H   +   +F V     T  D++  AL+P +      +
Sbjct: 61  TGHEEVLFPLLIPEDLLRRESTHIKGFEEEVFWVTKGGSTDLDVK-LALRPTSEVAITTM 119

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD-DAHVFC-TKEQMFNECL 405
            N  LKSY++LP +  +  SV+R E   +   ++R+R  T   +AH    T +    +  
Sbjct: 120 ENLWLKSYKQLPKKYYQIVSVFRYETK-ATRPMIRLREITTFKEAHTVHETYDDAQKQVE 178

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
           +   +   I+       ++ +              WD                       
Sbjct: 179 EAIEIYKKIFDTLTIPYVLSERPE-----------WDRF--------------------- 206

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIH 524
                 GA +   F+ I+ D  GR  Q GT+  +  N     +           +P   H
Sbjct: 207 -----AGALHTYAFDTIMPD--GRAMQIGTVHHLGQNFSKALDFKIQKKDGSLDYP---H 256

Query: 525 RAVFGSIER----FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVE-------YAQEIAN 573
           +  +G  +R     I I  ++    LP  ++PI+ +V  I +   E       Y+ EI  
Sbjct: 257 QTSYGISDRAVASVIAIHGDDHGPVLPPSVAPIKVVVIPIPAKNEEETQQVMKYSIEICE 316

Query: 574 LLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
           +   ++++  TD   E T   K     IK +PI +  G +E    ++ I+R  +  +  V
Sbjct: 317 MFNKNNITCLTDQDTEKTPGEKFYIWEIKGVPIRLEIGPRELISGTVFIKRRDNFKSYTV 376

Query: 633 SLLDAIPILTK--ESLPPDCQK 652
              +AI  + +    +  D ++
Sbjct: 377 RKEEAINKIKELLNEIQEDLRR 398


>gi|319405682|emb|CBI79305.1| Prolyl-tRNA synthetase [Bartonella sp. AR 15-3]
          Length = 441

 Score =  177 bits (449), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 70/448 (15%), Positives = 149/448 (33%), Gaps = 44/448 (9%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  L       +E+E   HR + R   +    +  SG+  W   G K+   +   +R +
Sbjct: 4   SQYFLPILKENPKEAEVVSHRFMLRAGMIR---QQTSGIYSWLPLGKKVLDKICKIIREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +     EI  P +    LW++S  ++ Y   M  +K   D     R     P N     
Sbjct: 61  QERIGALEILMPTIQSADLWRESNRYNDYGLEMLRIKDRQD-----RDLLYGPTNEEMVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +F   ++SY++LP+ L      +R+E      G+MR R F   DA+ F           
Sbjct: 116 DIFRSYVRSYKDLPLNLYHIQWKFRDEIRPRF-GVMRAREFLMKDAYSFDLDYASAKTSY 174

Query: 406 -KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIK-------- 456
            ++    +  +   G + I ++  T P     S      +E     +    +        
Sbjct: 175 NRMFVAYLRTFSRIGLKAIPMRADTGPIGGELSHEFIILSETGESSIFCDKRFLEFTIPS 234

Query: 457 ---NSSQDRINTGVLLGEGAFYGPKFEYILKDAIG----------RDWQCGTI-QVDFNL 502
              + +   +   V+    + Y    E   ++             R  + G I       
Sbjct: 235 VSIDFTDKDVLADVVRQWTSLYAATEEMHNEEEWNKVSAMNKLSARGIEVGHIFHFGTKY 294

Query: 503 PSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN----LPLWLSPIQAIV 557
            +   A  +    ++    ++    +G    R +  +IE+         P  ++P    +
Sbjct: 295 SAPMGAKIMGQDGKER---LVSMGSYGIGPSRLVAAVIESSHDEHGIIWPKSVAPFDFGI 351

Query: 558 TTITSSAVEY---AQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
             +     +     + +   L  +      D  +E    K     +  +P+ +I   K  
Sbjct: 352 INMKPDDQKCSYICETLYQGLIRNGFDPLLDDTSERPGSKFATMDLIGLPVQMIISPKNV 411

Query: 615 SERSIGIRRFGSTTTQKVSLLDAIPILT 642
           ++  + I+   +   + +++  A+    
Sbjct: 412 TQNEVEIKDRKTGFREVLTVEAALHRFA 439


>gi|296241821|ref|YP_003649308.1| prolyl-tRNA synthetase [Thermosphaera aggregans DSM 11486]
 gi|296094405|gb|ADG90356.1| prolyl-tRNA synthetase [Thermosphaera aggregans DSM 11486]
          Length = 483

 Score =  177 bits (449), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 71/413 (17%), Positives = 154/413 (37%), Gaps = 56/413 (13%)

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
              + K+ +E  +  I     G+  W   G K  +     + + +++  +EE   P ++ 
Sbjct: 19  PEWYHKVLKEAKIVDIRYPVKGMNVWMPYGLKALRLTQRILIQLLEETGHEEAYFPTMIP 78

Query: 302 QHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           + ++ ++      +    F V+       D R F ++P +      ++N  +K  ++LPV
Sbjct: 79  ESVFSKEKDFLQGFGGETFVVEGTATKRFDERLF-VRPTSETVMYYMWNMWIKGRKDLPV 137

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRG-FTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDF 418
           ++ +  +V+R E     H ++RVR      +AH    + E+   +  +   +    +   
Sbjct: 138 KMYQIVNVFRYETK-MTHPILRVREIMGFIEAHTAHASMEEAEAQIREALGIYKKFFDTL 196

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
                +VK              WD                             GA Y   
Sbjct: 197 QLPYFIVKTPP-----------WDTF--------------------------AGAEYNYD 219

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           F  ++ D  G +     I +       F+  ++++   + +   +++  +G  ER +G +
Sbjct: 220 FITVMPDGKGLEL-GSVINLGQRFSRAFDIKFMDTDGVEKY---VYQTCYGVSERTLGAV 275

Query: 539 I----ENFKGNLPLWLSPIQAIVTTIT----SSAVEYAQEIANLLKSHHLSIETDFRNE- 589
           I    ++     P  ++PIQ +V  I        ++Y++ +   LK+  + +  D   E 
Sbjct: 276 IGIHGDDKGLFFPPEIAPIQVVVVPIMKGVEQDVLDYSRNVEKHLKNLGVRVTVDMDLEH 335

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           T  +K     +  +P  I  G +EAS  ++ I R       +V + +    L 
Sbjct: 336 TPGWKYYYWEMLGVPTRIEIGKREASTNTVTIARRDGKPKVQVKISEIYDALK 388


>gi|154499081|ref|ZP_02037459.1| hypothetical protein BACCAP_03073 [Bacteroides capillosus ATCC
           29799]
 gi|150271921|gb|EDM99147.1| hypothetical protein BACCAP_03073 [Bacteroides capillosus ATCC
           29799]
          Length = 497

 Score =  177 bits (449), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 73/433 (16%), Positives = 159/433 (36%), Gaps = 54/433 (12%)

Query: 213 NRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKG 272
            R  + +   T     ++  + +  +E    + +  + ++ +L   +    G+  +   G
Sbjct: 7   TRKYICKGLKTDMAQDKKQVEQITDMEVDFAQWYTDVCKKAELIDYSSIK-GMFIYRPYG 65

Query: 273 WKIFQTLISYMRRKIKDDYEEINTPQVLDQHLW--QQSGHWDSYRANMFAVKCADDTIKD 330
           + I++ +   +  + K    E  +  +L       ++  H + +      V        +
Sbjct: 66  YAIWENIQKELDARFKATGHENVSLPMLIPESLLQKEKDHVEGFAPECAWVTMGGSEKLE 125

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
            R + ++P +       + + + S+R+LP    ++ SV R E +      +R R F   +
Sbjct: 126 ER-YCIRPTSETLFCEHYKNIIHSWRDLPKLYNQWCSVLRWEKTS--RPFLRHREFLWQE 182

Query: 391 AHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKG 450
            H   T      E  +    +++IY DF                          EN++  
Sbjct: 183 GH---TMHATEEEAREETKRMLNIYADF-------------------------LENVLAM 214

Query: 451 VLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAF 509
            +   + + +++ N       GA      E ++ D   +  Q GT           F+  
Sbjct: 215 PVVKGRKTDKEKFN-------GAEETYTVECMMHD--KKALQAGTSHYFGDGFAKAFDIT 265

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTI---TS 562
           +    ++  HP   H+  +G   R IG +I     N    LP  ++PIQ I+  +     
Sbjct: 266 FTGKDNQLHHP---HQTSWGVSTRMIGGLIMTHGDNNGLVLPPRIAPIQVIIIPVAQHKP 322

Query: 563 SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
             +E  Q + + L      ++ D  +++  +K  E+ +K +P+ +  G K+  +    + 
Sbjct: 323 GVIEANQAVMDRLIKAGFRVKMDDSDQSAGWKFAEYEMKGVPLRLELGPKDIEKNQCVLA 382

Query: 623 RFGSTTTQKVSLL 635
           R  S     VSL 
Sbjct: 383 RRDSGEKSFVSLD 395


>gi|325958767|ref|YP_004290233.1| prolyl-tRNA synthetase [Methanobacterium sp. AL-21]
 gi|325330199|gb|ADZ09261.1| Prolyl-tRNA synthetase [Methanobacterium sp. AL-21]
          Length = 469

 Score =  177 bits (449), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 68/408 (16%), Positives = 152/408 (37%), Gaps = 58/408 (14%)

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQ 302
                 +  E ++        G+  W  +G+KI +  +  ++  +  D+EE+  P ++ +
Sbjct: 5   SEWFHNILEEAEIIDTRYPVKGMHVWLPQGFKIRKHTLEILKTILDKDHEEVMFPLLIPE 64

Query: 303 HLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
               +++ H   +   ++ V     T  + +  AL+P +      +F+  ++++ +LP+R
Sbjct: 65  DELAKEAIHVKGFEEEVYWVTHGGLTELNKK-LALRPTSETAMYPMFSLWVRNHSDLPMR 123

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQD-DAHVFC-TKEQMFNECLKIHNLIISIYKDFG 419
             +  + +R E       L+RVR  T   +AH    + E+   +  +   +    +   G
Sbjct: 124 YYQVVNTFRYETK-HTRPLIRVREITTFKEAHTVHSSAEETEEQVKEALRIYRQFFDSLG 182

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
               + K              WD                             GA Y   F
Sbjct: 183 IPYTVSKRPE-----------WDKF--------------------------PGALYTMAF 205

Query: 480 EYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           + +L D  G+  Q GT+  +       F+  Y  +     +   +++  +G  +R I  +
Sbjct: 206 DTLLPD--GKTLQIGTVHNLGQTFAKTFDITYETAEGNHEY---VYQTCYGLSDRVIASL 260

Query: 539 I----ENFKGNLPLWLSPIQAIVTTI-----TSSAVEYAQEIANLLKSH-HLSIETDFRN 588
           I    ++    LP  ++P   ++  I         +++ +++   L+S  +L +  D R+
Sbjct: 261 IGIHGDDSGLCLPPDVAPYHVVIVPIIFKKGGEVVIDFCKKLQEKLESELNLRVYFDDRD 320

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
                K  E  ++ IP+ +  G ++     I   R  S   + +   D
Sbjct: 321 IRAGKKYYEWEMRGIPLRLEVGPRDIENHKIVTFRRESKEKEIIDYDD 368


>gi|119719726|ref|YP_920221.1| prolyl-tRNA synthetase [Thermofilum pendens Hrk 5]
 gi|152112960|sp|A1RYD8|SYP_THEPD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|119524846|gb|ABL78218.1| prolyl-tRNA synthetase [Thermofilum pendens Hrk 5]
          Length = 482

 Score =  177 bits (449), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 76/418 (18%), Positives = 166/418 (39%), Gaps = 62/418 (14%)

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
              + ++  +  L  +  +  G +       +I + +  +   +++   +E +  P V+ 
Sbjct: 15  SEWYSQVLSKAGLVDLRYNVQGFVVHKPWLMRIIKAIYRFFEEELEKTGHEPVLFPLVIP 74

Query: 302 QHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  ++ +  H + ++  +F V  A D  K  R  AL+P +      ++++ ++S+R+LP+
Sbjct: 75  EENFEKEKEHVEGFKPEVFWVTQAGDE-KLERRLALRPTSETAFYYMYSYWIQSWRDLPL 133

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH-VFCTKEQMFNECLK-IHNLIISIYKDF 418
           +L +  SVYRNE   +   L+R R F   +AH  F T E+  N+  + + N    I++  
Sbjct: 134 KLYQSVSVYRNEK--NTRPLIRGREFLWIEAHDAFATHEEALNQIREDMENSRKVIWEKL 191

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           G   + ++              WD                             GA     
Sbjct: 192 GIPFLFLRRPP-----------WDKFS--------------------------GAEDTYA 214

Query: 479 FEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG-SIERFIG 536
            + I+ D  GR  Q  +   +       FN  +++   ++ +   + +  +G  I R   
Sbjct: 215 ADTIMPD--GRVLQISSTHDLGQRFAKAFNVTFLDKDGKRKY---VWQTCYGPGIWRITA 269

Query: 537 IMIENFKGNLPLWL----SPIQAIVTTIT------SSAVEYAQEIANLLKSHHLSIETDF 586
            +I     +  L L    +PIQ ++  I          +E  +++  +++     +  D 
Sbjct: 270 ALIAIHGDDKGLVLPMNVAPIQVVIVPIYYKESDKERVLEKCRKLEAMIREAGYRVYLDA 329

Query: 587 RNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           R E T  +K  +  +K +P+ +  G +E    ++ + R      +KV+  + I  + K
Sbjct: 330 REEYTPGWKFNDWELKGVPVRLEVGVREVETGTVTVFRRDLRVKEKVADSELISHIRK 387


>gi|302389804|ref|YP_003825625.1| prolyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
 gi|302200432|gb|ADL08002.1| prolyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
          Length = 479

 Score =  177 bits (449), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 71/414 (17%), Positives = 159/414 (38%), Gaps = 58/414 (14%)

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
            + +  +  + +L   +     ++     G+ I++ +   + R+ K+  ++    P  + 
Sbjct: 17  SQWYVDVIIKGELADYSPVRGCMVI-RPYGYAIWENMQKLLDRRFKETGHKNAYFPLFIP 75

Query: 302 QHL-WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           + L  +++ H + +   +  V          R  A++P +     ++++  +KS+R+LPV
Sbjct: 76  ESLLKKEAEHVEGFAPEVAWVTHGGQEELAER-IAVRPTSETIICSMYSKWIKSWRDLPV 134

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKDFG 419
            + ++ SV R E S      +R   F   + H    T+E    E L++  +     +   
Sbjct: 135 LINQWCSVVRWEKS--TKPFLRTAEFLWQEGHTAHRTEEDAEEETLRMLEIYRDFVET-- 190

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
                                              +         +      GA      
Sbjct: 191 ----------------------------------ELAVPVVKGRKSENEKFAGALRTYTI 216

Query: 480 EYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           E ++ D  G+  Q GT   +  +    F+  +++   +  +   + +  +G   R IG +
Sbjct: 217 EAMMGD--GKALQAGTSHNLGQHFSKVFDITFLDQDGKLKY---VWQTSWGVSTRLIGAI 271

Query: 539 I----ENFKGNLPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNE- 589
           I    ++    LP  ++PIQ ++  I        +E ++ +   LK+++  +E D R+E 
Sbjct: 272 IMTHGDDRGLKLPPRVAPIQVVIVPIFGQQKEEILEKSRSLYQTLKNNNFRVELDDRDEY 331

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           T  +K  E  +K +P+ +  G K+ ++  + + R  +     V   D IP LT 
Sbjct: 332 TPGWKFNEWEMKGVPVRLEIGPKDLAQNQVLLVRRDTGEKISVKEADLIPYLTD 385


>gi|310659541|ref|YP_003937262.1| prolyl-tRNA synthetase 2 [Clostridium sticklandii DSM 519]
 gi|13633967|sp|Q9L4Q8|SYP_CLOSD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|6899998|emb|CAB71307.1| prolyl tRNA synthetase [Clostridium sticklandii]
 gi|308826319|emb|CBH22357.1| Prolyl-tRNA synthetase 2 (Proline--tRNA ligase 2) (ProRS 2)
           [Clostridium sticklandii]
          Length = 481

 Score =  177 bits (448), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 73/421 (17%), Positives = 159/421 (37%), Gaps = 57/421 (13%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
             QE  + +  ++E   + +  +  + DL   +     ++     G+ I++ + +++ R+
Sbjct: 4   KDQEFVKDITNMDEDFPQWYTDVITKTDLVDYSPVKGFMVI-KPYGYAIWENIQAFLDRR 62

Query: 287 IKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
            K+  ++    P ++ + L  ++  H + +   +  V          R   ++P +    
Sbjct: 63  FKETGHQNCYFPLLIPESLLNKEKEHVEGFAPEVAWVTHGGSEKLAER-LCVRPTSETII 121

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNE 403
            ++++  L SYRELP    ++ SV R E S      +R   F   + H    T E+   E
Sbjct: 122 CSMYSKWLTSYRELPYLYNQWCSVVRWEKS--TRPFLRTSEFLWQEGHTLHETAEEAQAE 179

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            L++  +   + +D     ++    +  E+  G+ A +                      
Sbjct: 180 TLQMLAIYKEMAEDLLAIPVVDGRKSDRERFAGAAATY---------------------- 217

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVM 522
                           E ++ D  G+  Q GT   +  +    F+  +     E  +P  
Sbjct: 218 --------------TIEALMHD--GKALQSGTSHNLAQHFTKAFDITFQGRTGELEYP-- 259

Query: 523 IHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTI---TSSAVEYAQEIANLL 575
            H   +G+  R IG +I     N    LP  ++P Q ++  I       ++ A EI   L
Sbjct: 260 -HHTSWGASTRLIGGIIMVHGDNRGLVLPPRVAPTQVVIIPIAQNKEGVLDKAYEIKKEL 318

Query: 576 KSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           ++  + +  D   N +  +K  ++ +K +P+ +  G ++       I R  + +    SL
Sbjct: 319 EAKGIRVTLDDDTNYSPGWKFNQYEMKGVPLRLEIGPRDIENNVAMIARRDTLSKDSYSL 378

Query: 635 L 635
            
Sbjct: 379 D 379


>gi|152974217|ref|YP_001373734.1| prolyl-tRNA synthetase [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|152022969|gb|ABS20739.1| prolyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98]
          Length = 476

 Score =  177 bits (448), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 79/431 (18%), Positives = 169/431 (39%), Gaps = 60/431 (13%)

Query: 228 QQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI 287
           ++E  Q +  +EE   + +  + ++ +L   +    G +     G+ +++ +   +  K+
Sbjct: 2   KKEQVQAITKMEEDFAQWYTDIVKKAELVDYSSVK-GCMILRPYGYALWENIQKVLDEKL 60

Query: 288 KD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           K   +E +  P  + ++L  ++  H + +   +  V    D  K      ++P +     
Sbjct: 61  KASGHENVYMPMFIPENLLQKEKDHVEGFAPKVAWVTHGGDE-KLGERLCVRPTSETLFC 119

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH-VFCTKEQMFNEC 404
             F+  ++SY +LP    ++ SV R E   +    +R   F   + H +  T E+   E 
Sbjct: 120 EHFSKIVQSYNDLPKLYNQWCSVVRWEK--TTRPFLRTTEFLWQEGHTIHETAEESQRET 177

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
           L I N+  S  +++    ++    T  EK  G+ A +                       
Sbjct: 178 LNILNVYASFCEEYLAIPVIKGKKTEKEKFAGAKATY----------------------- 214

Query: 465 TGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMI 523
                          E ++ D  G+  Q GT      N    F   Y++ + +  +   +
Sbjct: 215 -------------TIESLMHD--GKALQTGTSHNFGTNFSEAFEIKYLDRNGKWQY---V 256

Query: 524 HRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKS-- 577
           H+  +G   R IG +I    +N    +P  ++P+Q ++  I        +++A  LK   
Sbjct: 257 HQTSWGVSTRMIGGLIMVHSDNNGLVIPPKVAPVQVMIVPIAQHKEGILEKVA-ELKERI 315

Query: 578 -HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS--- 633
                +  D  ++T  +K  E+ +K +PI +  G K+  +  + + R  +   + VS   
Sbjct: 316 QQVARVRIDASSKTPGWKFNEYEMKGVPIRLEVGPKDIEKNQVVLVRRDTKEKECVSMDQ 375

Query: 634 LLDAIPILTKE 644
           L + I ++  E
Sbjct: 376 LEERIVLVLNE 386


>gi|229100656|ref|ZP_04231504.1| Prolyl-tRNA synthetase 2 [Bacillus cereus Rock3-29]
 gi|229119259|ref|ZP_04248564.1| Prolyl-tRNA synthetase 2 [Bacillus cereus Rock1-3]
 gi|228664184|gb|EEL19720.1| Prolyl-tRNA synthetase 2 [Bacillus cereus Rock1-3]
 gi|228682749|gb|EEL36779.1| Prolyl-tRNA synthetase 2 [Bacillus cereus Rock3-29]
          Length = 476

 Score =  177 bits (448), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 81/429 (18%), Positives = 169/429 (39%), Gaps = 60/429 (13%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           E  Q +  +EE   + +  + ++ +L   +    G +     G+ +++ +   M  K+K+
Sbjct: 4   EQVQAITKMEEDFAQWYTDIVKKAELVDYSSVK-GCMILRPYGYALWENMQKVMDEKLKE 62

Query: 290 -DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
             +E +  P  + + L  ++  H + +   +  V    D     R   ++P +       
Sbjct: 63  TGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGDEKLAER-LCVRPTSETLFCEH 121

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH-VFCTKEQMFNECLK 406
           F+  ++SY +LP    ++ SV R E   +    +R   F   + H +  T E+   E L 
Sbjct: 122 FSKIVQSYNDLPKLYNQWCSVVRWEK--TTRPFLRTTEFLWQEGHTIHETAEESQAETLN 179

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           I NL  S  +++    ++    T  EK  G+ A +                         
Sbjct: 180 ILNLYASFCEEYLAIPVIKGQKTEKEKFAGAKATY------------------------- 214

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
                        E ++ D  G+  Q GT      N    F+  +++ + +  +   +H+
Sbjct: 215 -----------TIESLMHD--GKALQTGTSHNFGTNFSEAFDIKFLDRNGKWQY---VHQ 258

Query: 526 AVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSH 578
             +G   R IG +I    +N    +P  ++P+Q ++  I       +E A E+   ++  
Sbjct: 259 TSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLEKATELQGRIQKV 318

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS---LL 635
              ++ D   +T  +K  E+ +K IPI +  G K+  +  + + R  +   + +S   L 
Sbjct: 319 -ARVKIDASTKTPGWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEKECISMDQLE 377

Query: 636 DAIPILTKE 644
           + I  L +E
Sbjct: 378 ERILSLLEE 386


>gi|68487989|ref|XP_712153.1| hypothetical protein CaO19.6701 [Candida albicans SC5314]
 gi|68488040|ref|XP_712128.1| hypothetical protein CaO19.13993 [Candida albicans SC5314]
 gi|77023056|ref|XP_888972.1| hypothetical protein CaO19_6701 [Candida albicans SC5314]
 gi|46433496|gb|EAK92934.1| hypothetical protein CaO19.13993 [Candida albicans SC5314]
 gi|46433523|gb|EAK92960.1| hypothetical protein CaO19.6701 [Candida albicans SC5314]
 gi|76573785|dbj|BAE44869.1| hypothetical protein [Candida albicans]
          Length = 691

 Score =  177 bits (448), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 81/407 (19%), Positives = 148/407 (36%), Gaps = 61/407 (14%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRAN 317
            D SG        + +++T+  +   +IK    +    P  + Q + + +  H + +   
Sbjct: 215 YDVSGCYILRPNSYFVWETIQDWFNARIKKLGVQNTYFPMFVSQRVLEKEKDHIEGFAPE 274

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           +  V  A ++  D    A++P +       +   ++S+R+LP++L ++ SV R E     
Sbjct: 275 VAWVTRAGNSELD-EHIAIRPTSETVMYPYYAKWIRSHRDLPLKLNQWNSVVRWEFK-HP 332

Query: 378 HGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
              +R R F   + H    TK+   NE L+I +    +Y++     ++    T  EK  G
Sbjct: 333 QPFLRTREFLWQEGHTAHLTKDAAANEVLQILDYYAGVYEELLAVPVVKGKKTENEKFAG 392

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
            D                                    Y    E     A GR  Q GT 
Sbjct: 393 GD------------------------------------YTTTVE-GFIAATGRGIQGGTS 415

Query: 497 -QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI-- 553
             +  N    FN    N    +   +  ++  +G   R IG+MI     N  L L P   
Sbjct: 416 HHLGTNFSKMFNISVENPEGSEKPRIFAYQNSWGLSTRVIGVMIMTHSDNKGLVLPPRIA 475

Query: 554 --QAIVTTIT----------SSAVEYAQEIANLLKSHHLSIETDFRN-ETINYKIREHSI 600
             QA+V  +               E A++I   L+++ + +  D+R      +K  +  +
Sbjct: 476 QYQAVVIPVGLTSKSTDAQRKEINEGAEKIEQSLRANGIRVTGDYREIYNPGWKFADWEL 535

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA---IPILTKE 644
           K +P+    G K+ +   + I R        V L +    +P L  +
Sbjct: 536 KGVPLRFEFGPKDLAGNQVTIVRRNDGKKYTVKLDELDTEVPKLLDQ 582


>gi|293376513|ref|ZP_06622741.1| proline--tRNA ligase [Turicibacter sanguinis PC909]
 gi|292644739|gb|EFF62821.1| proline--tRNA ligase [Turicibacter sanguinis PC909]
          Length = 476

 Score =  176 bits (447), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 79/426 (18%), Positives = 166/426 (38%), Gaps = 59/426 (13%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
           ++E   + +  + ++ +L   +     +I     G+ I++ +  Y+ +K K+  +E +  
Sbjct: 12  IDEDFAQWYTDVVKKAELVDYSSVKGCMII-RPYGYAIWENIQQYLDQKFKETGHENVYM 70

Query: 297 PQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P ++ + L  +++ H + +   +  V    +     R   ++P +       ++  ++SY
Sbjct: 71  PMLIPESLLQKEADHVEGFAPEVAWVTHGGNEKLSER-LVVRPTSETLFCDHYSKIIQSY 129

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISI 414
            +LP +  ++ SV R E   +    +R   F   + H    T E+   E L + N    +
Sbjct: 130 NDLPKKYNQWCSVVRWEK--TTRPFLRTTEFLWQEGHTVHATAEEAEEETLLMLNTYAKM 187

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            ++F    ++    T  EK  G+ A +                                 
Sbjct: 188 CEEFLAIPVLKGQKTEKEKFAGAQATY--------------------------------- 214

Query: 475 YGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
                E ++ D  G+  Q GT           F+  Y + +S+  +    H+  +G   R
Sbjct: 215 ---TIESLMHD--GKALQSGTSHNFGTGFAKAFDIKYSDKNSKMQYA---HQTSWGVTTR 266

Query: 534 FIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDF 586
            IG +I    ++    LP  ++P Q ++  I       +E A E+   L S    ++ D 
Sbjct: 267 LIGAIIMVHGDSSGLVLPPRVAPTQVMIIPIAAHKEGVIEKACELQTRLASV-ARVKCDT 325

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
            ++T  +K  E+ +K IP+ +  G K+     + + R  +     VSL D    + +  L
Sbjct: 326 SDKTPGWKFSEYEMKGIPVRVEIGPKDIENNQVVLVRRDTREKIIVSLDDLETKVVE--L 383

Query: 647 PPDCQK 652
             D Q+
Sbjct: 384 LEDIQQ 389


>gi|253581047|ref|ZP_04858308.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251847710|gb|EES75679.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 479

 Score =  176 bits (447), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 74/439 (16%), Positives = 163/439 (37%), Gaps = 58/439 (13%)

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR 284
               ++L + +  +EE   + +  + ++ +L         +      G+ I++ +   + 
Sbjct: 1   MANNKKLVEAITSMEEDFAQWYTDVVKKAELCGYTSVKGCMAI-KPAGYAIWENIQHELD 59

Query: 285 RKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
           R+ K+   + +  P  + + L  ++  H + +   +  V          R   ++P +  
Sbjct: 60  RRFKETGVQNVYMPIFIPESLLQKEKDHVEGFAPEVAWVTHGGLDPLQER-LCVRPTSET 118

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN 402
                +   ++S+R+LP    ++ SV R E   +    +R R F   + H      +   
Sbjct: 119 LFCDFYAKEIQSHRDLPKVYNQWCSVVRWEK--TTRPFLRSREFLWQEGHTAHATAEEAE 176

Query: 403 -ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
              +++ NL     ++     ++    T  EK  G++A +                    
Sbjct: 177 ERTIQMLNLYADFCEEVLAIPVIKGQKTDKEKFSGAEATY-------------------- 216

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHP 520
                             E ++ D  G+  Q GT           F   Y +  ++  + 
Sbjct: 217 ----------------TIESLMHD--GKALQSGTSHNFGDGFARAFGIQYTDKENKLQY- 257

Query: 521 VMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTI---TSSAVEYAQEIAN 573
             +H+  +G   R IG +I     N    LP  ++P+QA++  I       +E A E+  
Sbjct: 258 --VHQTSWGMTTRMIGAIIMVHGDNSGLVLPPRIAPVQAVIIPIQQRKEGVLEKADEMFA 315

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            LK+  + ++ D  +++  +K  E  ++ IPI I CG K+       I R  +     V+
Sbjct: 316 ALKAAGVRVKVDDTDKSPGFKFAEQEMRGIPIRIECGPKDIENGQAVICRRDTREKYTVT 375

Query: 634 LLDAIPILTK--ESLPPDC 650
             + +  + +  E++  D 
Sbjct: 376 FDELVEKVQEILETIQKDM 394


>gi|269958866|ref|YP_003328655.1| prolyl-tRNA synthetase [Anaplasma centrale str. Israel]
 gi|269848697|gb|ACZ49341.1| prolyl-tRNA synthetase [Anaplasma centrale str. Israel]
          Length = 425

 Score =  176 bits (447), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 73/402 (18%), Positives = 146/402 (36%), Gaps = 28/402 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRA 316
           + ++ SG+  W   G K+ + +   +R ++    + EI  P V    LW++S  +DSY  
Sbjct: 32  VRQNASGLYTWLPLGLKVLRGIERIVREEMDSSGFLEILMPSVQPAELWRESQRYDSYGL 91

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            M  ++      +  R     P +      V    LKSYR+LP+ L +    +R+E    
Sbjct: 92  EMLRMQD-----RSGREMVFGPTHEESISDVVRSSLKSYRDLPISLYQMQWKFRDELRPR 146

Query: 377 LHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
            HG+MR R F   DA+ F    E        + +  + I++  G   I  K  +      
Sbjct: 147 -HGIMRCREFLMKDAYSFDVDFESAMRSYSNVFSAYLRIFRRLGLVAIAAKADSGAIGGS 205

Query: 436 GSDALW------DDAENIMKGVLDTIKNS--SQDRINTGVLLGEGAFYGPKFEYILKD-A 486
            S          +      +  LD  + S  S + +       E A           D  
Sbjct: 206 TSHEFHVLVPTGESTVYHDRKALDISRKSDCSMEDVTGVYAATEDAHDPQNCGVHPDDLQ 265

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE----NF 542
           + +  +   +    +  S       +  S   +  ++     G I R +  +IE    + 
Sbjct: 266 VSKGIEVAHVFYLGDRYSAPMNVKFHDKSGNSNNALMGCYGIG-ISRLVAAIIEVFHDDV 324

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEY---AQEIANLLKSHHLSIETDFRNETINYKIREHS 599
               P  ++P +  +  + ++  +    A+ I   L         D   ++   K+    
Sbjct: 325 GIRWPESIAPFRVGIVNLLATNGDCKTTAETIYTALADS---SLYDDSADSPGVKLARMD 381

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           +  +P  +I G+    ++ + ++   S  T+K ++   I  +
Sbjct: 382 LLGMPWQVIIGNSFVKDKVVELKNRASGVTEKCTVGSLIARM 423


>gi|126651780|ref|ZP_01723982.1| prolyl-tRNA synthetase [Bacillus sp. B14905]
 gi|126591458|gb|EAZ85565.1| prolyl-tRNA synthetase [Bacillus sp. B14905]
          Length = 483

 Score =  176 bits (447), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 72/424 (16%), Positives = 155/424 (36%), Gaps = 58/424 (13%)

Query: 234 YLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYE 292
            +    E   + + +  ++ DL        G I +   G++I++ +   M R+ KD  + 
Sbjct: 5   TMSKQLEDFSKWYIETIQKADLMDYTPVR-GCIAFKPDGYEIWEHIQEAMDRRFKDTGHR 63

Query: 293 EINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
               P ++ +  + ++  H + +   +  V  A     + R  AL+P +      ++++ 
Sbjct: 64  NAYFPMLIPESFFQKEKDHIEGFSPELPWVTEAAGEKLEER-LALRPTSETMIGHLYSNW 122

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN-ECLKIHNL 410
           +KSYR+LPV + ++ +V+R E        +R   F   + H     E+    E +++  +
Sbjct: 123 IKSYRDLPVLINQWANVFRWEKK--TLPFIRTSEFLWQEGHTAHVDEEDARKETMQMLEI 180

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
              + +      +     T  E+  G                                  
Sbjct: 181 YKEVVEQVLAIPVYDGQKTPSERFAG---------------------------------- 206

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG 529
             A      E ++K+  G+  Q GT           FN  Y+N  ++  +   +H   +G
Sbjct: 207 --AVDTYSIEAMMKN--GKAVQAGTSHYLGTKFAEAFNIKYLNKANQHEY---VHTTSWG 259

Query: 530 SIERFIGIMIENFKGNLPLWL----SPIQAIVTTI-----TSSAVEYAQEIANLLKSHHL 580
           +  R IG +I        L L    +P Q ++  +         +E    I   LK+  +
Sbjct: 260 TSTRLIGSVIMVHGDEQGLVLPPRIAPTQVVLIPVGPWKKNPQIMEQLDAIFAALKAKGI 319

Query: 581 SIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
            +  D  +++  +K  E  +K +P+ I  G ++       ++       Q + L   +  
Sbjct: 320 RVRLDDSDQSPGFKFNEWELKGVPVRIELGPRDLENNQALLKARDEDDKQTIELSTIVAA 379

Query: 641 LTKE 644
           + +E
Sbjct: 380 IEEE 383


>gi|28948887|pdb|1NJ8|A Chain A, Crystal Structure Of Prolyl-Trna Synthetase From
           Methanocaldococcus Janaschii
 gi|28948888|pdb|1NJ8|B Chain B, Crystal Structure Of Prolyl-Trna Synthetase From
           Methanocaldococcus Janaschii
 gi|28948889|pdb|1NJ8|C Chain C, Crystal Structure Of Prolyl-Trna Synthetase From
           Methanocaldococcus Janaschii
 gi|28948890|pdb|1NJ8|D Chain D, Crystal Structure Of Prolyl-Trna Synthetase From
           Methanocaldococcus Janaschii
          Length = 459

 Score =  176 bits (447), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 75/415 (18%), Positives = 155/415 (37%), Gaps = 59/415 (14%)

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
              +  +  + +++ +     G   +   G+KI +     +R  + +  ++E   P ++ 
Sbjct: 8   SEWYSDILEKAEIYDVRYPIKGCGVYLPYGFKIRRYTFEIIRNLLDESGHDEALFPMLIP 67

Query: 302 QHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           + L  +++ H   +   ++ V     T  D++  AL+P +      +    +K + +LP+
Sbjct: 68  EDLLAKEAEHIKGFEDEVYWVTHGGKTQLDVK-LALRPTSETPIYYMMKLWVKVHTDLPI 126

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRG-FTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDF 418
           ++ +  + +R E       L+R+R   T  +AH    TKE+  N+  +  ++    +   
Sbjct: 127 KIYQIVNTFRYETK-HTRPLIRLREIMTFKEAHTAHSTKEEAENQVKEAISIYKKFFDTL 185

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           G   ++ K              WD                             GA Y   
Sbjct: 186 GIPYLISKRPE-----------WDKF--------------------------PGAEYTMA 208

Query: 479 FEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           F+ I  D  GR  Q  T+  +  N    F   +     +K +    ++  +G  +R I  
Sbjct: 209 FDTIFPD--GRTMQIATVHNLGQNFSKTFEIIFETPTGDKDYA---YQTCYGISDRVIAS 263

Query: 538 MIENFKGN----LPLWLSPIQAIVTTIT-----SSAVEYAQEIANLLKSHHLSIETDFRN 588
           +I          LP  ++PIQ ++  +         +E A+EI   LK     +  D R+
Sbjct: 264 IIAIHGDEKGLILPPIVAPIQVVIVPLIFKGKEDIVMEKAKEIYEKLKGK-FRVHIDDRD 322

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
                K  +  IK +P+ I  G K+   + I + R  +    +V     + ++ K
Sbjct: 323 IRPGRKFNDWEIKGVPLRIEVGPKDIENKKITLFRRDTMEKFQVDETQLMEVVEK 377


>gi|227827828|ref|YP_002829608.1| prolyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
 gi|229585098|ref|YP_002843600.1| prolyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
 gi|259511620|sp|C3N6D0|SYP_SULIA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|259511623|sp|C3MW88|SYP_SULIM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|227459624|gb|ACP38310.1| prolyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
 gi|228020148|gb|ACP55555.1| prolyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
          Length = 481

 Score =  176 bits (447), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 85/442 (19%), Positives = 170/442 (38%), Gaps = 64/442 (14%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           +        ++       + RE + +        G+  W   G+K+ Q +IS +R  +  
Sbjct: 1   MQITREKWSKNFSEWFDWVLREGEFYDYGRYPVKGMGVWMPYGFKLRQNIISIIRNLLDS 60

Query: 290 -DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
             +EE+  P ++ + L  ++S H   +   +F V        D++  AL+P +      +
Sbjct: 61  TGHEEVLFPLLIPEDLLSRESTHIKGFEEEVFWVTKGGSEDLDVK-LALRPTSEVAITTM 119

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD-DAHVFC-TKEQMFNECL 405
            N  LKSY++LP +  +  SV+R E   +   ++R+R  T   +AH    T +    +  
Sbjct: 120 ENLWLKSYKQLPKKYYQIVSVFRYETK-ATRPMIRLREITTFKEAHTVHETYDDAQRQVE 178

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
           +   +   I+ +     ++ +              WD                       
Sbjct: 179 EAIEIYKKIFNNLAIPYVLSERPE-----------WDRF--------------------- 206

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIH 524
                 GA +   F+ I+ D  G+  Q GT+  +  N     +           +P   H
Sbjct: 207 -----AGALHTYAFDTIMPD--GKVMQIGTVHHLGQNFSRALDFKIQKKDGSLDYP---H 256

Query: 525 RAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVE-------YAQEIAN 573
           +  +G  +R I  +I    ++    LP  ++PI+ +V  I +   E       Y+ EI  
Sbjct: 257 QTSYGISDRAIASVIAIHGDDHGPILPPSVAPIKVVVVPIPAKNEEGTQQVMKYSVEICE 316

Query: 574 LLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
           +L  ++++  TD   E T   K     IK +PI +  G +E +  ++ I+R  +  +  V
Sbjct: 317 MLNKNNITCVTDQDTEKTPGEKFYIWEIKGVPIRLEIGPRELASSTVFIKRRDNLKSYTV 376

Query: 633 SLLDAIPILTK--ESLPPDCQK 652
              + +  + +    +  D +K
Sbjct: 377 KKEEVVNKVKEVLNEIQEDLRK 398


>gi|321468238|gb|EFX79224.1| hypothetical protein DAPPUDRAFT_245240 [Daphnia pulex]
          Length = 192

 Score =  176 bits (446), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 79/197 (40%), Positives = 110/197 (55%), Gaps = 10/197 (5%)

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
             L GL RVR F QDDAH+FC   Q+ +E       +      FGF   + +LSTRPEK 
Sbjct: 5   EPLSGLTRVRRFQQDDAHIFCIMGQIKSEINGALAFLRD---IFGFTFQL-RLSTRPEKF 60

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           +G    W+ AE  +   L+   ++ Q      +  G+GAFYGPK +  + DA+ R  QC 
Sbjct: 61  LGEIETWNHAEKELTESLNEFGDTWQ------LNPGDGAFYGPKIDITIMDALRRPHQCA 114

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQ 554
           TIQ++F LP RFN  ++N   EK  PV+IHRA+ GS++  I I+ E + G  P WLSP Q
Sbjct: 115 TIQLEFQLPIRFNLSFINEAGEKEKPVIIHRAILGSVQHMIAILTEIYAGKWPFWLSPRQ 174

Query: 555 AIVTTITSSAVEYAQEI 571
            +V  +      YAQ++
Sbjct: 175 CVVVLVGPVFHGYAQQV 191


>gi|323474896|gb|ADX85502.1| prolyl-tRNA synthetase [Sulfolobus islandicus REY15A]
          Length = 481

 Score =  176 bits (446), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 85/442 (19%), Positives = 170/442 (38%), Gaps = 64/442 (14%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           +        ++       + RE + +        G+  W   G+K+ Q +IS +R  +  
Sbjct: 1   MQITREKWSKNFSEWFDWVLREGEFYDYGRYPVKGMGVWMPYGFKLRQNIISIIRNLLDS 60

Query: 290 -DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
             +EE+  P ++ + L  ++S H   +   +F V        D++  AL+P +      +
Sbjct: 61  TGHEEVLFPLLIPEDLLSRESTHIKGFEEEVFWVTKGGSEDLDVK-LALRPTSEVAITTM 119

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD-DAHVFC-TKEQMFNECL 405
            N  LKSY++LP +  +  SV+R E   +   ++R+R  T   +AH    T +    +  
Sbjct: 120 ENLWLKSYKQLPKKYYQIVSVFRYETK-ATRPMIRLREITTFKEAHTVHETYDDAQRQVE 178

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
           +   +   I+ +     ++ +              WD                       
Sbjct: 179 EAIEIYKKIFNNLAIPYVLSERPE-----------WDRF--------------------- 206

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIH 524
                 GA +   F+ I+ D  G+  Q GT+  +  N     +           +P   H
Sbjct: 207 -----AGALHTYAFDTIMPD--GKVMQIGTVHHLGQNFSRALDFKIQKKDGSLDYP---H 256

Query: 525 RAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVE-------YAQEIAN 573
           +  +G  +R I  +I    ++    LP  ++PI+ +V  I +   E       Y+ EI  
Sbjct: 257 QTSYGISDRAIASVIAIHGDDHGPILPPSVAPIKVVVVPIPAKNEEGTQQVMKYSIEICE 316

Query: 574 LLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
           +L  ++++  TD   E T   K     IK +PI +  G +E +  ++ I+R  +  +  V
Sbjct: 317 MLNKNNITCVTDQDTEKTPGEKFYIWEIKGVPIRLEIGPRELASSTVFIKRRDNLKSYTV 376

Query: 633 SLLDAIPILTK--ESLPPDCQK 652
              + +  + +    +  D +K
Sbjct: 377 KKEEVVNKVKEVLNEIQEDLRK 398


>gi|15669423|ref|NP_248233.1| prolyl-tRNA synthetase [Methanocaldococcus jannaschii DSM 2661]
 gi|2501043|sp|Q58635|SYP_METJA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|1591870|gb|AAB99242.1| prolyl-tRNA synthetase (proS) [Methanocaldococcus jannaschii DSM
           2661]
          Length = 455

 Score =  176 bits (446), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 75/418 (17%), Positives = 155/418 (37%), Gaps = 59/418 (14%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
                 +  +  + +++ +     G   +   G+KI +     +R  + +  ++E   P 
Sbjct: 1   MEFSEWYSDILEKAEIYDVRYPIKGCGVYLPYGFKIRRYTFEIIRNLLDESGHDEALFPM 60

Query: 299 VLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           ++ + L  +++ H   +   ++ V     T  D++  AL+P +      +    +K + +
Sbjct: 61  LIPEDLLAKEAEHIKGFEDEVYWVTHGGKTQLDVK-LALRPTSETPIYYMMKLWVKVHTD 119

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRG-FTQDDAHV-FCTKEQMFNECLKIHNLIISIY 415
           LP+++ +  + +R E       L+R+R   T  +AH    TKE+  N+  +  ++    +
Sbjct: 120 LPIKIYQIVNTFRYETK-HTRPLIRLREIMTFKEAHTAHSTKEEAENQVKEAISIYKKFF 178

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
              G   ++ K              WD                             GA Y
Sbjct: 179 DTLGIPYLISKRPE-----------WDKF--------------------------PGAEY 201

Query: 476 GPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
              F+ I  D  GR  Q  T+  +  N    F   +     +K +    ++  +G  +R 
Sbjct: 202 TMAFDTIFPD--GRTMQIATVHNLGQNFSKTFEIIFETPTGDKDYA---YQTCYGISDRV 256

Query: 535 IGIMIENFKGN----LPLWLSPIQAIVTTIT-----SSAVEYAQEIANLLKSHHLSIETD 585
           I  +I          LP  ++PIQ ++  +         +E A+EI   LK     +  D
Sbjct: 257 IASIIAIHGDEKGLILPPIVAPIQVVIVPLIFKGKEDIVMEKAKEIYEKLKGK-FRVHID 315

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            R+     K  +  IK +P+ I  G K+   + I + R  +    +V     + ++ K
Sbjct: 316 DRDIRPGRKFNDWEIKGVPLRIEVGPKDIENKKITLFRRDTMEKFQVDETQLMEVVEK 373


>gi|323477637|gb|ADX82875.1| prolyl-tRNA synthetase [Sulfolobus islandicus HVE10/4]
          Length = 481

 Score =  176 bits (446), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 84/442 (19%), Positives = 170/442 (38%), Gaps = 64/442 (14%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           +        ++       + RE + +        G+  W   G+K+ Q +IS +R  +  
Sbjct: 1   MQITREKWSKNFSEWFDWVLREGEFYDYGRYPVKGMGVWMPYGFKLRQNIISIIRNLLDS 60

Query: 290 -DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
             +EE+  P ++ + L  ++S H   +   +F V        D++  AL+P +      +
Sbjct: 61  TGHEEVLFPLLIPEDLLSRESTHIKGFEEEVFWVTKGGSEDLDVK-LALRPTSEVAITTM 119

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD-DAHVFC-TKEQMFNECL 405
            N  LKSY++LP +  +  SV+R E   +   ++R+R  T   +AH    T +    +  
Sbjct: 120 ENLWLKSYKQLPKKYYQIVSVFRYETK-ATRPMIRLREITTFKEAHTVHETYDDAQRQVE 178

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
           +   +   I+ +     ++ +              WD                       
Sbjct: 179 EAIEIYKKIFNNLAIPYVLSERPE-----------WDRF--------------------- 206

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIH 524
                 GA +   F+ I+ D  G+  Q GT+  +  N     +           +P   H
Sbjct: 207 -----AGALHTYAFDTIMPD--GKVMQIGTVHHLGQNFSRALDFKIQKKDGSLDYP---H 256

Query: 525 RAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVE-------YAQEIAN 573
           +  +G  +R I  +I    ++    LP  ++PI+ +V  I +   E       Y+ EI  
Sbjct: 257 QTSYGISDRAIASVIAIHGDDHGPILPPSVAPIKVVVVPIPAKNEEGTQQVMKYSIEICE 316

Query: 574 LLKSHHLSIETD-FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
           +L  ++++  TD    +T   K     IK +PI +  G +E +  ++ I+R  +  +  V
Sbjct: 317 MLNKNNITCVTDQDTEKTPGEKFYIWEIKGVPIRLEIGPRELASSTVFIKRRDNLKSYTV 376

Query: 633 SLLDAIPILTK--ESLPPDCQK 652
              + +  + +    +  D +K
Sbjct: 377 KKEEVVNKVKEVLNEIQEDLRK 398


>gi|291564005|emb|CBL42821.1| prolyl-tRNA synthetase, family I [butyrate-producing bacterium
           SS3/4]
          Length = 477

 Score =  176 bits (446), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 70/417 (16%), Positives = 154/417 (36%), Gaps = 58/417 (13%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINT 296
           +E+   + +  + ++ +L   A     ++     G+ I++ +   + ++ K    + +  
Sbjct: 14  MEDDFAQWYTDVVKKAELCDYASVKGCMVI-KPDGYAIWENIQHELDKRFKKAGVKNVYM 72

Query: 297 PQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P  + + L  ++  H + +   +  V          R   ++P +       +   + SY
Sbjct: 73  PLFIPESLLDKEKDHVEGFAPEVAWVTQGGLEPLQER-LCVRPTSETLFCDFYQKDIHSY 131

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISI 414
           R+LP    ++ SV R E   +    +R R F   + H    T E+     +++ NL    
Sbjct: 132 RDLPKVYNQWCSVVRWEK--TTRPFLRSREFLWQEGHTAHATAEEAQERTIQMLNLYADF 189

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            +DF    ++    T  EK  G++A +                                 
Sbjct: 190 CEDFLAIPVVRGQKTDKEKFAGAEATY--------------------------------- 216

Query: 475 YGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
                E ++ D  G+  Q GT           F   Y +  ++  +   +H+  +G   R
Sbjct: 217 ---TIESLMHD--GKALQSGTSHNFGDGFAKAFGIQYSDKDNQLKY---VHQTSWGMTTR 268

Query: 534 FIGIMIENFKGN----LPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDF 586
            IG +I     N    LP  ++P Q ++  I       +E A+E+  +L +    ++ D 
Sbjct: 269 MIGAIIMVHGDNEGLVLPPNVAPTQVVIVPIRQQQEGVLEKAREVEEVLSN--FRVKVDD 326

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +++  +K  E  ++ IP+ +  G K+       + R  +     V+L +    + +
Sbjct: 327 SDKSPGWKFSESEMRGIPVRVELGPKDIEAGQAVLVRRDTHEKITVALSEIAEKVDE 383


>gi|167945769|ref|ZP_02532843.1| Threonyl-tRNA synthetase, class IIa [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 165

 Score =  176 bits (446), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 61/149 (40%), Positives = 92/149 (61%), Gaps = 4/149 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS + F    +  +VA  I   LAK  +A  +NG++ D S  +  +  +
Sbjct: 15  MPV---ITLPDGSTRRFDNPVSVYEVAADIGPGLAKATLAGRVNGELVDASFLMEADSEL 71

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT  D  +L ++RH  AH+MA+AVQ ++P  QV IGP IE+GFYYDF +E+PF+ D+L
Sbjct: 72  AIITSRDEAALELMRHDAAHVMAQAVQELYPGTQVTIGPAIENGFYYDFAREEPFTPDDL 131

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARE 148
            +IE++M EI+ RD P  ++     +A +
Sbjct: 132 KKIEQRMHEIVKRDLPLQREVWDRAEAIK 160


>gi|46121741|ref|XP_385425.1| hypothetical protein FG05249.1 [Gibberella zeae PH-1]
          Length = 553

 Score =  176 bits (446), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 74/431 (17%), Positives = 158/431 (36%), Gaps = 59/431 (13%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++  + ++++  + ++     + SG          I+  +  + +  I++   +E N P 
Sbjct: 55  DNFPQWYQEVVLKAEMVEYYTEISGFFVLRPLSMHIWNEIRKWFQGHIEEMGVDETNFPM 114

Query: 299 VLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            L     + +  H + +   +  V  A D   ++   A++P +       ++  ++S+R+
Sbjct: 115 FLSSKSLEKEKDHVEGFAPELAWVTKAGDKDLEV-PVAVRPTSEAVMYPYYSKWIRSHRD 173

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYK 416
           LP+RL ++ SV R E        +R R F   + H    T+E    E L+I  L   +Y+
Sbjct: 174 LPLRLNQWNSVVRWEAK-QTTPFLRTREFLWQEGHTAHLTEELAGAEVLEILELYAGVYE 232

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
                 ++    T  EK  G                                     +Y 
Sbjct: 233 KLLAVPVVRGRKTENEKFAGG------------------------------------YYT 256

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
              E  +  + GR  Q  T        S+     V    ++   + + +  +G   R IG
Sbjct: 257 TTVEGYIP-SNGRGIQGATSHALGQNFSKMFDITVEDPQKQGSHIHVWQNSWGLSTRVIG 315

Query: 537 IMIENFKGNLPLWLSP----IQAIVTTIT----------SSAVEYAQEIANLLKSHHLSI 582
           +M+     +  L L P     Q ++  +               +  +EI   LK   + +
Sbjct: 316 VMVMIHGDDKGLVLPPRVAKTQVVIVPVGINKKTTPEEKKKHEDQVEEIRANLKKAGVRV 375

Query: 583 ETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
             D+R   T  +K  +  +K +P+ +  G K+A++  I   R  +    ++++ D    +
Sbjct: 376 TADWREGYTPAWKFNDWELKGVPLRVEFGPKDAAKGVISTARRDTGEKGEIAIADVATKV 435

Query: 642 TK--ESLPPDC 650
            +  E++  D 
Sbjct: 436 PELLETIQSDM 446


>gi|291549825|emb|CBL26087.1| prolyl-tRNA synthetase, family I [Ruminococcus torques L2-14]
          Length = 478

 Score =  176 bits (446), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 78/426 (18%), Positives = 155/426 (36%), Gaps = 58/426 (13%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEE-INT 296
            EE   + +  + RE  L   +    G + +   G+ +++ +   +  + K+   E +  
Sbjct: 12  REEDFAQWYTDVVREAKLCDYSGVK-GCMNYLPNGYALWENIQKNLDARFKETGVENVYL 70

Query: 297 PQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P ++ + L  ++  H + +   +  V          R F ++P +      V++  ++SY
Sbjct: 71  PVMIPESLLQKEKDHIEGFAPEVAWVTHGGLEELQER-FCIRPTSETLFCDVWSKTVQSY 129

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISI 414
           R+LP    ++ SV R E   +    +R R F   + H    T E+      ++      +
Sbjct: 130 RDLPKVWNQWCSVLRWEK--TTRPFLRSREFLWQEGHTIHATYEEAEERTKQM----WRV 183

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           Y+DF                                  D +         T      GA 
Sbjct: 184 YRDF--------------------------------AQDVLAIPVVSGRKTESEKFAGAQ 211

Query: 475 YGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
                E ++ D  G+  Q  T      + PS F   Y + ++E      ++   +G   R
Sbjct: 212 DTYTIEALMHD--GKALQSATSHFFGSSFPSAFGIQYSDKNNELHE---VYETSWGLSTR 266

Query: 534 FIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDF 586
            IG +I    ++    +P  ++P+Q ++  I       ++ A E+ + LK+    ++ D 
Sbjct: 267 IIGALIMVHGDDSGLVIPPRIAPVQTMIIPIAQHKEGVLDKANELVDTLKAAGYKVKIDD 326

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK--E 644
            ++   +K     I  IP  I  G K+       I R  +     VSL +    L +  E
Sbjct: 327 SDKAPGWKFSGQEILGIPTRIEIGPKDIENNQAVIVRRDTREKIVVSLDELTTKLAEVLE 386

Query: 645 SLPPDC 650
           ++  D 
Sbjct: 387 TMQNDM 392


>gi|118566325|gb|ABL01534.1| tRNA synthetase [Mycosphaerella fijiensis]
          Length = 182

 Score =  176 bits (446), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 75/182 (41%), Positives = 114/182 (62%), Gaps = 7/182 (3%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RDHRK+ ++ +LF   +   G  F+   G  I+ +L++Y++ +     Y+E+ +P + + 
Sbjct: 1   RDHRKIGQDQELFFFHQMSPGSAFFLPHGMIIYNSLMAYLKEEYWRRGYQEVASPNMYNS 60

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+QSGHW  Y  +MF      D       +ALKPMNCPGH  +F H  +SYRELP+R+
Sbjct: 61  ALWKQSGHWQHYHEDMFTFDVEKDK------WALKPMNCPGHCLLFAHRERSYRELPMRI 114

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           A+FG ++RNE SG+L GL RVR F QDD H+FCT+ Q+  E   + + ++++Y  FGF+ 
Sbjct: 115 ADFGILHRNEASGALTGLTRVRRFQQDDTHIFCTEAQIEQEINGLFDFMMAVYGRFGFKF 174

Query: 423 IM 424
            M
Sbjct: 175 RM 176


>gi|227830538|ref|YP_002832318.1| prolyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
 gi|229579351|ref|YP_002837749.1| prolyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
 gi|229581889|ref|YP_002840288.1| prolyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
 gi|284998034|ref|YP_003419801.1| prolyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5]
 gi|259511622|sp|C3MQL0|SYP_SULIL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|259511624|sp|C3NGV6|SYP_SULIN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|259511625|sp|C3NET8|SYP_SULIY RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|227456986|gb|ACP35673.1| prolyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
 gi|228010065|gb|ACP45827.1| prolyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
 gi|228012605|gb|ACP48366.1| prolyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
 gi|284445929|gb|ADB87431.1| prolyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5]
          Length = 481

 Score =  176 bits (446), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 85/442 (19%), Positives = 170/442 (38%), Gaps = 64/442 (14%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           +        ++       + RE + +        G+  W   G+K+ Q +IS +R  +  
Sbjct: 1   MQITRDKWSKNFSEWFDWVLREGEFYDYGRYPVKGMGVWMPYGFKLRQNIISIIRNLLDS 60

Query: 290 -DYEEINTPQVLDQHL-WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
             +EE+  P ++ + L  ++S H   +   +F V        D++  AL+P +      +
Sbjct: 61  TGHEEVLFPLLIPEDLLRRESTHIKGFEEEVFWVTKGGSEDLDVK-LALRPTSEVAITTM 119

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD-DAHVFC-TKEQMFNECL 405
            N  LKSY++LP +  +  SV+R E   +   ++R+R  T   +AH    T +    +  
Sbjct: 120 ENLWLKSYKQLPKKYYQIVSVFRYETK-ATRPMIRLREITTFKEAHTVHETYDDAQRQVE 178

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
           +   +   I+ +     ++ +              WD                       
Sbjct: 179 EAIEIYKKIFNNLAIPYVLSERPE-----------WDRF--------------------- 206

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIH 524
                 GA +   F+ I+ D  G+  Q GT+  +  N     +           +P   H
Sbjct: 207 -----AGALHTYAFDTIMPD--GKVMQIGTVHHLGQNFSRALDFKIQKKDGSLDYP---H 256

Query: 525 RAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVE-------YAQEIAN 573
           +  +G  +R I  +I    ++    LP  ++PI+ +V  I +   E       Y+ EI  
Sbjct: 257 QTSYGISDRAIASVIAIHGDDHGPILPPSVAPIKVVVVPIPAKNEEGTQQVMKYSIEICE 316

Query: 574 LLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
           +L  ++++  TD   E T   K     IK +PI +  G +E +  ++ I+R  +  +  V
Sbjct: 317 MLNKNNITCVTDQDTEKTPGEKFYIWEIKGVPIRLEIGPRELASSTVFIKRRDNLKSYTV 376

Query: 633 SLLDAIPILTK--ESLPPDCQK 652
              + +  + +    +  D +K
Sbjct: 377 KKEEVVNKVKEVLNEIQEDLRK 398


>gi|259046393|ref|ZP_05736794.1| proline--tRNA ligase [Granulicatella adiacens ATCC 49175]
 gi|259036938|gb|EEW38193.1| proline--tRNA ligase [Granulicatella adiacens ATCC 49175]
          Length = 482

 Score =  176 bits (445), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 69/427 (16%), Positives = 151/427 (35%), Gaps = 58/427 (13%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTL-ISYMRRKIKD 289
           + +      E   + + +  ++ DL   +    G + +   G++I++ +   + RR  ++
Sbjct: 1   MAEKTNLQREDFSKWYIQTIQKADLMDYSPVR-GCMIFKPDGYEIWEHIQEEFNRRFKEE 59

Query: 290 DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
                  P ++ +  + +++ H + +   +  V  A     + R  AL+P +       F
Sbjct: 60  GIRNAYFPMLIPESFFTKEADHIEGFAPELPWVTEAAGEKLEER-LALRPTSETMIGTAF 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE-CLKI 407
           ++ + SYR+LP  + ++ +V+R E        +R   F   + H     E+      +K+
Sbjct: 119 SNWINSYRDLPYEINQWANVFRWEKK--TLPFLRTSEFLWQEGHTAHADEEDARRRTMKM 176

Query: 408 HNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGV 467
             +   + +      +     T  E+  G                               
Sbjct: 177 LEVYKEVVEGVLAVPVYEGQKTPSERFAG------------------------------- 205

Query: 468 LLGEGAFYGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
                A      E ++KD  G+  Q GT           F+  Y+   +E    V  H  
Sbjct: 206 -----AVDTYSIEAMMKD--GKAVQAGTSHYMGTKFAEAFDIKYLTKENE---HVYAHTT 255

Query: 527 VFGSIERFIGIMIENFKGNLPLWL----SPIQAIVTTI-----TSSAVEYAQEIANLLKS 577
            +G   R IG +I        L L    +P Q ++  +       + +E  +E+   LK+
Sbjct: 256 SWGVSTRLIGSLIMTHGDEKGLVLPPKVAPTQVVLIPVGPWKKNPAILEKLEELQKELKA 315

Query: 578 HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
             L ++ D  + +  +K  E  ++ +P+ I CG ++     +  +         V     
Sbjct: 316 AGLRVKIDDTDNSPGFKFNEWELRGVPMRIECGPRDLENNQVMTKMRDLDEKVAVGFDVL 375

Query: 638 IPILTKE 644
           +  +  E
Sbjct: 376 VDTILSE 382


>gi|84515335|ref|ZP_01002697.1| prolyl-tRNA synthetase [Loktanella vestfoldensis SKA53]
 gi|84510618|gb|EAQ07073.1| prolyl-tRNA synthetase [Loktanella vestfoldensis SKA53]
          Length = 446

 Score =  176 bits (445), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 73/436 (16%), Positives = 151/436 (34%), Gaps = 37/436 (8%)

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQTLISYM-RR 285
             L++Y   + +   R+ + ++    L    I +  +G+  W   G+K+ + + + + + 
Sbjct: 1   MRLSRYFLPVLKETPREAQIVSHRYMLQAGMIKQASAGIYSWLPLGFKVLRKIENIVHQE 60

Query: 286 KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           + +  +  I  P +    LW++SG +D+Y   M  +K         R     P       
Sbjct: 61  QERAGHIAIQMPTIQSADLWRESGRYDAYGEEMLRIKDRG-----GREMLFTPTAEELVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNEC 404
            +F   + SY++LP+ L +    +R+E      G+MR R F   D + F  TKE   +  
Sbjct: 116 DIFRAHVTSYKDLPLTLYQIQWKFRDEVRPRF-GVMRGREFYMKDGYNFDLTKEDALHAY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            +     +  Y+  G + I ++  + P     +      A+     V    + +     +
Sbjct: 175 NRHLVSYLRTYERMGLQAIPMRADSGPIGGDDTHEFLVLADTGESEVFYDSQITDLKFGD 234

Query: 465 TGVLLGEGAF-----------YGPKFEYILKDAIG-----RDWQCGTI---QVDFNLPSR 505
             +   + A            Y    E             R      I   Q+ +     
Sbjct: 235 RQIDYSDHAACAAVLDEFTSRYARTDETHDAALFNQVPEERRRTARGIEVGQIFYFGTKY 294

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGNLPLWL---SPIQAIVTTI 560
            +A        K   V +H    G  + R +G +IE +      +W    +P    +  +
Sbjct: 295 SDAMGALVDDGKGGKVPVHMGSHGIGVSRLLGAIIEASHDDKGIIWPEGVTPFHCGIVNL 354

Query: 561 TSSAVEY---AQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASER 617
                E     Q + + L +  L    D R+E    K     +  +P  I  G +     
Sbjct: 355 KQGDAEADAACQALYDSLTALGLEPLYDDRDERAGTKFGTMDMIGLPWRITVGPRGLKNG 414

Query: 618 SIGIRRFGSTTTQKVS 633
            + +    +  ++++ 
Sbjct: 415 VVELTSRRTGESEELP 430


>gi|305664329|ref|YP_003860617.1| prolyl-tRNA synthetase [Ignisphaera aggregans DSM 17230]
 gi|304378898|gb|ADM28737.1| prolyl-tRNA synthetase [Ignisphaera aggregans DSM 17230]
          Length = 493

 Score =  176 bits (445), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 85/425 (20%), Positives = 164/425 (38%), Gaps = 62/425 (14%)

Query: 237 FLEESEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEI 294
              E+  +    + RE +++        G+  W   G++I + +I  +R  + +  +EE+
Sbjct: 9   KYGENFSQWFEWIIREAEIYDYGRYPVKGMGIWMPYGFQIRRNVIEIIRNLLNETGHEEV 68

Query: 295 NTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
             P ++ + L++ +S H   +   +  V    +   D++   L+P +      + +  +K
Sbjct: 69  LFPILIPEILFRRESEHVRGFEGEVLWVTRGGNEELDVK-LVLRPTSETAISYMESFWIK 127

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD-DAHVFCTK-EQMFNECLKIHNLI 411
           SY++LP +  +  SV+R E       ++RVR  T   +AH      E    + L+  ++ 
Sbjct: 128 SYKQLPKKYYQVVSVFRYETK-MTKPMIRVREITTFKEAHTVHENFEDSERQVLEAIDIY 186

Query: 412 ISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
              + + G   I+ +              WD                             
Sbjct: 187 SKFFDELGIPYIISRRPQ-----------WDKF--------------------------A 209

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF-NAFYVNSHSEKCHPVMIHRAVFGS 530
           GA Y   F+ +  D  GR  Q GT+    NL   F + F V             +  +G 
Sbjct: 210 GALYTIAFDTVFPD--GRAIQIGTVH---NLGQTFTSVFDVKIQKRDETIDYAWQTSYGI 264

Query: 531 IERFIGIMI----ENFKGNLPLWLSPIQAIVTT-------ITSSAVEYAQEIANLLKSHH 579
            ER I  +I    ++    LP  ++P   ++         I  S + Y  +I N+LK ++
Sbjct: 265 SERVIASIIAIHSDDIGLILPSNVAPYTVVIIPIPHQDEKIYQSIINYCNDIHNILKVNN 324

Query: 580 LSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           +    D R +     K RE  +K +PI I  G KE S+ ++ + R        ++  + I
Sbjct: 325 IRSLIDERLDVKPAEKYRECELKGVPIRIEIGFKEVSQNTVTLFRRDLRKRFTINKDELI 384

Query: 639 PILTK 643
            ++  
Sbjct: 385 SVIKN 389


>gi|160941555|ref|ZP_02088887.1| hypothetical protein CLOBOL_06453 [Clostridium bolteae ATCC
           BAA-613]
 gi|158435520|gb|EDP13287.1| hypothetical protein CLOBOL_06453 [Clostridium bolteae ATCC
           BAA-613]
          Length = 479

 Score =  176 bits (445), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 64/424 (15%), Positives = 156/424 (36%), Gaps = 56/424 (13%)

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR 284
               +++ + +  ++E   + +  + ++ +L   A     ++     G+ I++ +   M 
Sbjct: 1   MADNKKMVEAITSMDEDFAQWYTDVVKKAELCDYASVKGCMVI-KPAGYAIWENIQKEMD 59

Query: 285 RKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
           R+ K+   + +  P  + + L + +  H + +   +  V          R   ++P +  
Sbjct: 60  RRFKETGVQNVYMPIFIPESLLEKEKDHVEGFAPEVAWVTHGGLEELQER-MCVRPTSET 118

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN 402
                +   + SYR+LP    ++ SV R E   +    +R R F   + H      +   
Sbjct: 119 LFCDFYAKDIHSYRDLPRVYNQWCSVVRWEK--TTRPFLRSREFLWQEGHTAHASAEEAE 176

Query: 403 -ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
              +++ NL     ++     ++    T  EK  G++A +                    
Sbjct: 177 ARTIQMLNLYADFCEEVLAIPVIKGQKTDKEKFAGAEATY-------------------- 216

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHP 520
                             E ++ D  G+  Q GT           F+  + +  +   + 
Sbjct: 217 ----------------TIESLMHD--GKALQSGTSHNFGDGFAKAFDIQFTDKDNTLKY- 257

Query: 521 VMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIAN 573
             +H+  +G   R IG +I    ++    LP  ++P+Q +V  +       ++ A E+  
Sbjct: 258 --VHQTSWGVSTRIIGAIIMVHGDDNGLVLPPRIAPVQIMVVPVQQQKEGVLDKAYELKE 315

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            L     +++ D  +++  +K  +  ++ +P+ +  G K+  +    + R  +     VS
Sbjct: 316 RLTKAGYAVKVDDTDKSPGWKFADCEMRGVPLRVEIGPKDIEKNQAVLVRRDNHEKSFVS 375

Query: 634 LLDA 637
           L + 
Sbjct: 376 LDEL 379


>gi|238620001|ref|YP_002914827.1| prolyl-tRNA synthetase [Sulfolobus islandicus M.16.4]
 gi|259511621|sp|C4KHU5|SYP_SULIK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|238381071|gb|ACR42159.1| prolyl-tRNA synthetase [Sulfolobus islandicus M.16.4]
          Length = 481

 Score =  176 bits (445), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 85/442 (19%), Positives = 170/442 (38%), Gaps = 64/442 (14%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           +        ++       + RE + +        G+  W   G+K+ Q +IS +R  +  
Sbjct: 1   MQITREKWSKNFSEWFDWVLREGEFYDYGRYPVKGMGVWMPYGFKLRQNIISIIRNLLDS 60

Query: 290 -DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
             +EE+  P ++ + L  ++S H   +   +F V        D++  AL+P +      +
Sbjct: 61  TGHEEVLFPLLIPEDLLSRESTHIKGFEEEVFWVTKGGSEDLDVK-LALRPTSEVAITTM 119

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD-DAHVFC-TKEQMFNECL 405
            N  LKSY++LP +  +  SV+R E   +   ++R+R  T   +AH    T +    +  
Sbjct: 120 ENLWLKSYKQLPKKYYQIVSVFRYETK-ATRPMIRLREITTFKEAHTVHETYDDAQRQVE 178

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
           +   +   I+ +     ++ +              WD                       
Sbjct: 179 EAIEIYKKIFNNLTIPYVLSERPE-----------WDRF--------------------- 206

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIH 524
                 GA +   F+ I+ D  G+  Q GT+  +  N     +           +P   H
Sbjct: 207 -----AGALHTYAFDTIMPD--GKVMQIGTVHHLGQNFSRALDFKIQKKDGSLDYP---H 256

Query: 525 RAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVE-------YAQEIAN 573
           +  +G  +R I  +I    ++    LP  ++PI+ +V  I +   E       Y+ EI  
Sbjct: 257 QTSYGISDRAIASVIAIHGDDHGPILPPSVAPIKVVVVPIPAKNEEGTQQVMKYSIEICE 316

Query: 574 LLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
           +L  ++++  TD   E T   K     IK +PI +  G +E +  ++ I+R  +  +  V
Sbjct: 317 MLNKNNITCVTDQDTEKTPGEKFYIWEIKGVPIRLEIGPRELASSTVFIKRRDNLKSYTV 376

Query: 633 SLLDAIPILTK--ESLPPDCQK 652
              + +  + +    +  D +K
Sbjct: 377 KKEEVVNKVKEVLNEIQEDLRK 398


>gi|301106649|ref|XP_002902407.1| prolyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
 gi|262098281|gb|EEY56333.1| prolyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
          Length = 764

 Score =  176 bits (445), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 75/412 (18%), Positives = 144/412 (34%), Gaps = 61/412 (14%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ-VLDQHLWQQSGHWDSYRAN 317
            D SG        ++I++ +  ++ R +K    +    P  V  + L ++  H + +   
Sbjct: 288 YDVSGCYILRPYSYEIWERVQQFLDRNLKAIGVKNCYFPMFVTKEKLEKEKDHLEGFAPE 347

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           +  V  + ++       A++P +       F + ++S+R+LP++L ++ +V R E     
Sbjct: 348 VAWVTKSGNSEL-KDPIAIRPTSETIMYPAFKNWIRSHRDLPMKLNQWNNVVRWEFKNPT 406

Query: 378 HGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
              +R R F   + H    TKE+   E   + +   + Y++                   
Sbjct: 407 -PFLRTREFLWQEGHTAHATKEEADEEVRAVLDFYAACYEEL------------------ 447

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
                             +       + T      GA Y    E  +  A GR  Q  T 
Sbjct: 448 ------------------LAVPMIKGVKTEKEKFAGADYTTTIEGFIP-ATGRGIQAATS 488

Query: 497 Q-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL----S 551
             +  N    F         +K  P    +  +G   R +G+MI     +  L L    +
Sbjct: 489 HMLGQNFGKMFGITAEYEDGKKLIP---WQNSWGFTTRSLGVMIMVHGDDKGLVLPPRVA 545

Query: 552 PIQAIVTTI-------TSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIREHSIKKI 603
           P Q IV  I              A EI   L    + IE D R   T  +K     +K +
Sbjct: 546 PTQVIVVPIPFKNQDEVEEIFAKADEIVAKLADAGVRIEADKRCVYTPGWKYNHWELKGV 605

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA---IPILTKESLPPDCQK 652
           P+    G K+ +++ + + R  +   + +   +    IP L ++      ++
Sbjct: 606 PLRFEVGPKDIAKKQVRVVRRDNGAKEDIPEAELATRIPALLEQIQQEMLER 657


>gi|260947818|ref|XP_002618206.1| hypothetical protein CLUG_01665 [Clavispora lusitaniae ATCC 42720]
 gi|238848078|gb|EEQ37542.1| hypothetical protein CLUG_01665 [Clavispora lusitaniae ATCC 42720]
          Length = 686

 Score =  176 bits (445), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 80/415 (19%), Positives = 147/415 (35%), Gaps = 61/415 (14%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVL--DQHLWQQSGHWDSYRAN 317
            D SG        + +++ + ++    IK    + +   +    + L ++  H + +   
Sbjct: 210 YDVSGCYILRPNSYFVWEEIQNWFNGHIKKMGVKNSYFPMFVSSRVLEKEKDHVEGFAPE 269

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           +  V  A  +  D    A++P +       +   ++S+R+LP+RL ++ SV R E     
Sbjct: 270 VAWVTRAGSSELD-EHIAIRPTSETVMYPYYAKWIRSHRDLPLRLNQWNSVVRWEFKHP- 327

Query: 378 HGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
              +R R F   + H    TKE    E  +I +L   +Y++     ++    T  EK  G
Sbjct: 328 QPFLRTREFLWQEGHTAHLTKEGAATEVEQILDLYRGVYEELLAVPVVKGRKTANEKFAG 387

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
           +D                                    Y    E     A GR  Q  T 
Sbjct: 388 AD------------------------------------YTTTCE-GFIAATGRGIQGATS 410

Query: 497 -QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI-- 553
             +  N    FN    N    +   V   +  +G   R IG+MI     N  L L P   
Sbjct: 411 HHLGTNFSKMFNISVENPEGPEKERVFAFQNSWGLSTRVIGVMIMTHSDNKGLVLPPRVA 470

Query: 554 --QAIVTTIT----------SSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSI 600
             Q +V  +            +    A+++ + L    L +  D+RN  +  +K  +  +
Sbjct: 471 QNQVVVVPVGLTSKSTPEQRDAVNGGAKKVEDALADAGLRVVGDYRNNYSPGWKFADWEL 530

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA---IPILTKESLPPDCQK 652
           K +P+ +  G K+ +   +   R  +     V L D    IP L + +     ++
Sbjct: 531 KGVPLRVEFGPKDLAAGQVTAVRRDNGEKYVVKLGDLSTRIPELLELTQREMLER 585


>gi|296110087|ref|YP_003617036.1| prolyl-tRNA synthetase [Methanocaldococcus infernus ME]
 gi|295434901|gb|ADG14072.1| prolyl-tRNA synthetase [Methanocaldococcus infernus ME]
          Length = 451

 Score =  175 bits (444), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 72/418 (17%), Positives = 154/418 (36%), Gaps = 60/418 (14%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
                 + ++    +++ +     G   +   G+KI +     + + + +  +E++  P 
Sbjct: 1   MEFSEWYSEILERAEIYDVRYPIKGCGVYLPYGFKIRKYTFEILSKLLDESGHEQVLFPL 60

Query: 299 VLDQHLWQQSG-HWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           ++ + L  + G H   +   ++ V     T  D++  AL+P +      +    +K + +
Sbjct: 61  LIPETLLAKEGEHIKGFEDEVYWVTHGGKTPLDVK-LALRPTSETAIYYMLKLWVKVHTD 119

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRG-FTQDDAHV-FCTKEQMFNECLKIHNLIISIY 415
           LP++L +  + +R E       L+R+R   T  +AH    TKE+   +  +   +    +
Sbjct: 120 LPIKLYQIVNTFRYETK-HTRPLIRLREIMTFKEAHTAHATKEEAEKQVKEAIGIYKKFF 178

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
              G   +++K              WD                             GA Y
Sbjct: 179 DTLGIPYLIIKRPE-----------WDKF--------------------------PGADY 201

Query: 476 GPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
              F+ I  D  GR  Q GT+  +  +    F   +     +K +    ++  +G  +R 
Sbjct: 202 TIAFDTIFPD--GRAIQIGTVHNLGQHFSKTFEIEFETPTGDKDYA---YQTCYGISDRA 256

Query: 535 IGIMI----ENFKGNLPLWLSPIQAIVTTIT-----SSAVEYAQEIANLLKSHHLSIETD 585
           I  +I    +     LP  ++PIQ ++  +         +  A+E+A  LK     +  D
Sbjct: 257 IASIIAIHGDEKGLKLPPVVAPIQVVIIPLIFKGKEEMVINKAKEVAERLKE--YRVHID 314

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            R+     K  +  IK +P+ I  G ++  E  I + R  +     +   +    + +
Sbjct: 315 DRDIRPGKKYYDWEIKGVPLRIDIGPRDIEEGKITLVRRDTGEKIVIEESELEEKVRE 372


>gi|322706591|gb|EFY98171.1| prolyl-tRNA synthetase [Metarhizium anisopliae ARSEF 23]
          Length = 556

 Score =  175 bits (444), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 82/446 (18%), Positives = 161/446 (36%), Gaps = 59/446 (13%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
              E+    +   E+    ++++  + ++     + SG          I+ T+  +    
Sbjct: 42  KADEIIGITHSKAENFSAWYQEVVLKAEMVEYYHEISGFFVLRPLSMHIWSTIRKWFSGH 101

Query: 287 IKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           I++   EE + P  L +    ++  H D +   +  V+ A D   D+   A++P +    
Sbjct: 102 IEELGVEEASFPLFLSKTSLDKEKDHVDGFAPELAWVERAGDKKLDV-PVAIRPTSEAVM 160

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNE 403
              +   ++S+R+LP+RL ++ SV R E        +R R F   + H    T+E    E
Sbjct: 161 YPYYAKWIRSHRDLPLRLNQWNSVVRWEAK-QTTPFLRTREFLWQEGHTAHLTEELAGEE 219

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            L+I  L   +Y+      ++    T  EK  G                           
Sbjct: 220 VLEILELYAGVYEQLLAVPVVRGRKTENEKFAGG-------------------------- 253

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
                     +Y    E  +  + GR  Q GT        S+     V     K   V +
Sbjct: 254 ----------YYTTTVEGYIP-SNGRGIQGGTSHCLGQNFSKMFEITVEDPHNKGQHVHV 302

Query: 524 HRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTTIT----------SSAVEYAQ 569
            +  +G   R IG+M+     +  L L P     QAI   +               +  +
Sbjct: 303 WQNSWGLSTRVIGVMVMVHGDDKGLVLPPRVAQTQAIFIPVGINKNTTPEDRQKHEDQIE 362

Query: 570 EIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
           ++   LK   +  ++D+R   T  +K  +  +K +P+ +  G K+A++  +   R  +  
Sbjct: 363 DMRATLKKAGVRTQSDWREGYTPAWKFNDWEMKGVPVRLEFGPKDAAKEVVSFARRDTGE 422

Query: 629 TQKVSLLDAIPILTK--ESLPPDCQK 652
              + + D    + +  E++  D  K
Sbjct: 423 KGTIPIADIATKIPELLETIQADMYK 448


>gi|229826593|ref|ZP_04452662.1| hypothetical protein GCWU000182_01968 [Abiotrophia defectiva ATCC
           49176]
 gi|229789463|gb|EEP25577.1| hypothetical protein GCWU000182_01968 [Abiotrophia defectiva ATCC
           49176]
          Length = 507

 Score =  175 bits (444), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 70/443 (15%), Positives = 159/443 (35%), Gaps = 59/443 (13%)

Query: 221 YGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLI 280
            G      +++ + +  ++E   + +  + ++ +L   +     V+     G+ I++ + 
Sbjct: 26  RGNKMAKDKKMVEAITSMDEDFAQWYTDVVKKAELADYSSVKGFVVL-KPYGFGIWENIQ 84

Query: 281 SYMRRKIKDDYEE-INTPQVLDQH-LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKP 338
             +    K    E +  P ++ +  + ++  H + +      V          R   ++P
Sbjct: 85  KTLDSAFKSTGVENVCMPLLIPESLINKEKDHVEGFAPEAAWVTHGGSEELQER-LCVRP 143

Query: 339 MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTK 397
            +       ++  ++SYR+LP    ++ SV R E        +R R F   + H    T+
Sbjct: 144 TSETLFCDFYSKDIRSYRDLPKVYNQWCSVVRWEK--ETRPFLRTREFLWQEGHTAHATE 201

Query: 398 EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKN 457
           E+     +++ N+ +  ++                                    + +  
Sbjct: 202 EEAQARTIQMLNVYVDFFE------------------------------------NELAI 225

Query: 458 SSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSE 516
                  T      GA      E ++ D  G+  Q GT           ++  + +  + 
Sbjct: 226 PVIKGQKTEKEKFAGAVSTYTIEAMMHD--GKALQSGTSHNFGDGFARAYDVTFTDKDNS 283

Query: 517 KCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQ 569
             +    H+  +G   R IG +I    ++    LP  ++P Q ++  I       +E A 
Sbjct: 284 IQYA---HQTSWGVSTRMIGAIIMVHGDDNGLVLPPRIAPTQVMIIPIMQNKEGVLEKAN 340

Query: 570 EIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           E+ N L S    ++ D  ++T  +K  +  ++ IP+ +  G K+       + R  +   
Sbjct: 341 ELKNRL-SADFRVKLDDSDKTPGFKFADQEMRGIPVRVEIGPKDIEANKCIVVRRDNREK 399

Query: 630 QKVSLLDAIPILTK--ESLPPDC 650
            +VSL +    L +  ES+  D 
Sbjct: 400 TEVSLDELETKLAEILESIQKDM 422


>gi|238883498|gb|EEQ47136.1| hypothetical protein CAWG_05697 [Candida albicans WO-1]
          Length = 691

 Score =  175 bits (444), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 81/407 (19%), Positives = 148/407 (36%), Gaps = 61/407 (14%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRAN 317
            D SG        + +++T+  +   +IK    +    P  + Q + + +  H + +   
Sbjct: 215 YDVSGCYILRPNSYFVWETIQDWFNARIKKLGVQNTYFPMFVSQRVLEKEKDHIEGFAPE 274

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           +  V  A ++  D    A++P +       +   ++S+R+LP++L ++ SV R E     
Sbjct: 275 VAWVTRAGNSELD-EHIAIRPTSETVMYPYYAKWIRSHRDLPLKLNQWNSVVRWEFK-HP 332

Query: 378 HGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
              +R R F   + H    TK+   NE L+I +    +Y++     ++    T  EK  G
Sbjct: 333 QPFLRTREFLWQEGHTAHLTKDAAANEVLQILDYYAGVYEELLAVPVVKGKKTENEKFAG 392

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
            D                                    Y    E     A GR  Q GT 
Sbjct: 393 GD------------------------------------YTTTVE-GFIAATGRGIQGGTS 415

Query: 497 -QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI-- 553
             +  N    FN    N    +   +  ++  +G   R IG+MI     N  L L P   
Sbjct: 416 HHLGTNFSKMFNISVENPEGSEKPRIFAYQNSWGLSTRVIGVMIMTHSDNKGLVLPPRIA 475

Query: 554 --QAIVTTIT----------SSAVEYAQEIANLLKSHHLSIETDFRN-ETINYKIREHSI 600
             QA+V  +               E A++I   L+++ + +  D+R      +K  +  +
Sbjct: 476 QYQAVVIPVGLTSKSTDAQRKEINEGAEKIEQSLRANGIRVTGDYREIYNPGWKFADWEL 535

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA---IPILTKE 644
           K +P+    G K+ +   + I R        V L +    +P L  +
Sbjct: 536 KGVPLRFEFGPKDLAGNQVTIVRRNDGKKYTVKLDELDTEVPKLLDQ 582


>gi|291460611|ref|ZP_06600001.1| proline--tRNA ligase [Oribacterium sp. oral taxon 078 str. F0262]
 gi|291416802|gb|EFE90521.1| proline--tRNA ligase [Oribacterium sp. oral taxon 078 str. F0262]
          Length = 478

 Score =  175 bits (444), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 67/409 (16%), Positives = 148/409 (36%), Gaps = 56/409 (13%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
           + E   + +  + ++ +L   +     ++     G+ I++ L+  +  + K    +    
Sbjct: 13  MSEDFAQWYTDIVKKAELADYSSVKGFMVI-RPAGYAIWEMLMQALDSRFKASGVQNCAM 71

Query: 297 PQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P ++ + L  ++S H + +   +  V       +      ++P +       ++  +KSY
Sbjct: 72  PMLIPESLLSRESEHVEGFAPEVAWVT-MGGKKRLEEKLCVRPTSEVLFCDYYSKIVKSY 130

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISI 414
           R+LP  L ++ SV R E   +    +R R F   + H    T E+     + + N+    
Sbjct: 131 RDLPQLLNQWVSVIRWEK--TTRPFLRTREFLWQEGHTVHATAEEAEERTILMLNIYK-- 186

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
                                      D AEN M      I   S  + +     G  A 
Sbjct: 187 ---------------------------DVAENEM-----AIPVVSGRKTDKEKFAGAIAT 214

Query: 475 YGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           Y    E ++ D  G+  QCGT           F   +++  +++     +H+  +G   R
Sbjct: 215 YT--IEGLMHD--GQALQCGTSHNFGDGFAKAFGVQFLDKDNQRKT---VHQTSWGFTTR 267

Query: 534 FIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDF 586
            IG +I    ++    +P  ++P Q ++  +       ++ A  +   L      ++ D 
Sbjct: 268 MIGALIMVHGDDSGLKIPPRIAPTQIMIVPVQQQKEGVLDKAFSLRERLIKAGFRVKVDD 327

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
            + +  YK  +  ++ IP+ +  G ++       + R  +       L 
Sbjct: 328 SDRSPGYKFADCEMRGIPLRLEIGPRDIEAGQAVLVRRDTGEKLTAPLD 376


>gi|255731874|ref|XP_002550861.1| hypothetical protein CTRG_05159 [Candida tropicalis MYA-3404]
 gi|240131870|gb|EER31429.1| hypothetical protein CTRG_05159 [Candida tropicalis MYA-3404]
          Length = 684

 Score =  175 bits (444), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 79/407 (19%), Positives = 143/407 (35%), Gaps = 61/407 (14%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQ-QSGHWDSYRAN 317
            D SG        + +++T+  Y   R  K   +    P  + Q + + +  H + +   
Sbjct: 208 YDVSGCYILRPNSYFVWETIQDYFNVRIKKLGVQNAYFPMFVSQRVLEKEKDHIEGFAPE 267

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           +  V  A  +  D    A++P +       +   ++S+R+LP++L ++ SV R E     
Sbjct: 268 VAWVTRAGSSELD-EHIAIRPTSETVMYPYYAKWIRSHRDLPLKLNQWNSVVRWEFK-HP 325

Query: 378 HGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
              +R R F   + H    T++    E L+I +    +Y++     ++    T  EK  G
Sbjct: 326 QPFLRTREFLWQEGHTAHLTQDAAAEEVLQILDYYAGVYEELLAVPVVKGKKTENEKFAG 385

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
            D                                    Y    E     A GR  Q GT 
Sbjct: 386 GD------------------------------------YTTTVE-GFIAATGRGIQGGTS 408

Query: 497 -QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI-- 553
             +  N    FN    +    +   +  ++  +G   R IG+MI     N  L L P   
Sbjct: 409 HHLGTNFSKMFNLSVESPEGPEKPRIFAYQNSWGLSTRVIGVMIMTHSDNKGLVLPPRIA 468

Query: 554 --QAIVTTIT----------SSAVEYAQEIANLLKSHHLSIETDFRN-ETINYKIREHSI 600
             QA+V  +               E AQ+I   L+   +    D+R      +K  +  +
Sbjct: 469 QYQAVVIPVGLTSKSSDAQRKDINEGAQKIEKTLQDAGIRATGDYREIYNPGWKFADWEL 528

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA---IPILTKE 644
           K +P+ +  G K+ +   + + R        V L +    IP +  +
Sbjct: 529 KGVPLRLEFGPKDLAGNQVTVVRRNDGKKYTVKLDELQTEIPKILDD 575


>gi|317127978|ref|YP_004094260.1| prolyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
 gi|315472926|gb|ADU29529.1| prolyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
          Length = 478

 Score =  175 bits (444), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 69/394 (17%), Positives = 146/394 (37%), Gaps = 57/394 (14%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAV 321
           G I +   G+++++ +   M  + K+  +     P ++ +  + ++  H + +   +  V
Sbjct: 29  GCIAFKPDGYELWEHIKEEMDSRFKETGHRNAYFPMLIPETFFQKEKDHIEGFSPELPWV 88

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
             A     + R  AL+P +      +++  +KSYR+LPV + ++ +V+R E        +
Sbjct: 89  TEAAGEKLEER-LALRPTSETMIGHLYSKWIKSYRDLPVLINQWANVFRWEKK--TLPFI 145

Query: 382 RVRGFTQDDAHVFCTKEQMFN-ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           R   F   + H     E+    E +++ N+   + +      +     T  E+  G    
Sbjct: 146 RTSEFLWQEGHTAHVDEEDARKETMQMLNIYKEVVEGLLAIPVYDGEKTPSERFAG---- 201

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV-D 499
                                           A      E ++KD  G+  Q GT     
Sbjct: 202 --------------------------------AVDTYSIEAMMKD--GKAVQAGTSHYLG 227

Query: 500 FNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL----SPIQA 555
                 F+  Y+   ++  +   +H   +G+  R IG +I        L L    +P Q 
Sbjct: 228 TKFAEAFDIKYLTRENKHEN---VHTTSWGTSTRLIGSVIMVHGDEQGLVLPPRIAPTQV 284

Query: 556 IVTTI-----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           ++  +       + ++   EI   LK   + +  D  +++  YK  E  +K +P+ I  G
Sbjct: 285 VLIPVGPWKKNPAIIDKLDEIFVALKVKGIRVRLDDSDQSPGYKFNEWELKGVPVRIELG 344

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            ++     + ++         VSL   +  + KE
Sbjct: 345 PRDLEGNQVMMKARDEREKLVVSLDTVVESIEKE 378


>gi|302845190|ref|XP_002954134.1| hypothetical protein VOLCADRAFT_109913 [Volvox carteri f.
           nagariensis]
 gi|300260633|gb|EFJ44851.1| hypothetical protein VOLCADRAFT_109913 [Volvox carteri f.
           nagariensis]
          Length = 618

 Score =  175 bits (443), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 77/427 (18%), Positives = 157/427 (36%), Gaps = 63/427 (14%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ-VLD 301
             + +L    +L     + SG        + +++ +  +  ++IK    +    P  + +
Sbjct: 143 EWYSELVVASELISY-YEVSGCYILRPWAYAMWEMVQGWFDKRIKQLGVQNSYFPLFITE 201

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             L ++  H + +   +  V    ++  +    A++P +       F   ++S+R+LP+R
Sbjct: 202 DVLNKEKDHVEGFAPEVAWVTKCGNSTMEK-PIAIRPTSETVMYPYFAQWIRSHRDLPLR 260

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGF 420
           L ++ +V R E        +R R F   + H  F T+E+   E L I  L   +Y+D   
Sbjct: 261 LNQWTNVVRWEFKYPT-PFIRSREFLWQEGHTAFATQEEAAREVLDILELYRGVYEDMLA 319

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
             +     ++ E+  G                                    AFY    E
Sbjct: 320 VPVTKGKKSKKEQFAG------------------------------------AFYTTTVE 343

Query: 481 YILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
             + +  GR  Q  T   +  N    F   + +   +K +   + +  +G   R +G+MI
Sbjct: 344 AYIPET-GRGIQGATSHCLGQNFSKMFGIQFEDDDRQKQY---VWQNSWGLTTRSLGVMI 399

Query: 540 ENFKGNLPLWL----SPIQAIVTTITSSA---------VEYAQEIANLLKSHHLSIETDF 586
                +  L L    +P Q ++  I  ++         +E   E+A  L+   + + TD 
Sbjct: 400 MTHADDKGLVLPPRVAPKQVVIIPIPKASTTPETVQAMMEKVTELAEALEKAGVRVVTDT 459

Query: 587 R-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK-- 643
           R N T  +K     +K +P+ +  G K+     + + R  +   + V   D    +    
Sbjct: 460 RVNYTPGWKYNHWELKGLPLRMELGPKDMENSVVVLARRDTGAKEAVPWTDVAARVPALL 519

Query: 644 ESLPPDC 650
           E++  D 
Sbjct: 520 ETIQADM 526


>gi|65319683|ref|ZP_00392642.1| COG0441: Threonyl-tRNA synthetase [Bacillus anthracis str. A2012]
          Length = 154

 Score =  175 bits (443), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 59/149 (39%), Positives = 96/149 (64%), Gaps = 1/149 (0%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEII 62
            I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N ++ DL   + E   +EII
Sbjct: 5   MIEIKFPDGSVKEFVXGITLEEIAGSISSSLKKKAVAGNVNDELYDLRRNIEENAEVEII 64

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T +    + + RHS AHI+A+AV+ ++ ++ + +GP+IE+GFYYD D     + ++L +I
Sbjct: 65  TIDSNEGVEIARHSAAHILAQAVKRLYGDINLGVGPVIENGFYYDMDLPSSVNVEDLRKI 124

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFE 151
           EK+M++II  +    +  +S E+A +LF+
Sbjct: 125 EKEMKKIINENIKVERVEVSREEAAKLFQ 153


>gi|84999652|ref|XP_954547.1| prolyl-trna synthetase [Theileria annulata]
 gi|65305545|emb|CAI73870.1| prolyl-trna synthetase, putative [Theileria annulata]
          Length = 702

 Score =  175 bits (443), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 79/494 (15%), Positives = 165/494 (33%), Gaps = 46/494 (9%)

Query: 165 IPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTA 224
           +   ++V +  +     L +  H  +   +        V        ++   ++ +    
Sbjct: 136 LSNDQSVVMKMEDMLKFLTQINHFPTFLPLNDLDSTTHVNNIDKNSVNSNNTVNSVNTNE 195

Query: 225 WNTQQELTQYLYFLEESEKR--DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISY 282
            N + E+      +++ E     + ++    ++     D SG   +    + I++T   +
Sbjct: 196 KNKKGEMNILGITVKKHENFAEWYSQVIIRSEMIEY-YDISGCYIFLPSSYFIWETFNEW 254

Query: 283 MRRKI-KDDYEEINTPQ-VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
             ++I +   E    P  V  + L  +  H + +   +  V    D        A++P +
Sbjct: 255 FNKQIKQRGVENCYFPMFVTKEKLEAEKTHLEGFSPEVAWVTRNGDVDLPD-PIAIRPTS 313

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQ- 399
                  F   ++S+R+LP++L ++ SV R E        +R R F   + H   T EQ 
Sbjct: 314 ETIMYPEFARWIRSHRDLPLKLNQWNSVVRWEFKQPT-PFIRSREFLWQEGHTAHTTEQE 372

Query: 400 MFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSS 459
             +   ++ NL            +                             + +    
Sbjct: 373 ALDTVYEMLNLYSKYILVINVLIMSRFYE------------------------EYLSVPV 408

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKC 518
              + +      G+      E  +  A GR  Q  T  +        F+  Y +    K 
Sbjct: 409 IKGVKSENEKFAGSKMTTSLESFIP-ANGRGVQAATSHLLGTTFSDMFDIRYEDEEGVKQ 467

Query: 519 HPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTTITSSAVE----YAQE 570
               +H+  +G   R IGIMI     +  L L P    +Q ++  I S   E       E
Sbjct: 468 K---VHQTSWGFTTRSIGIMIMVHGDDKGLVLPPRVAKVQVVIVPIMSKTAEQVMLRVNE 524

Query: 571 IANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           +  LL      ++ D R   T  +K     ++ +P+ +  G K+    ++ + R  +   
Sbjct: 525 LFQLLTEAGFRVKLDDRRGYTPGFKFNHWELRGVPLRLEVGAKDVENNTVRLVRRDNFAK 584

Query: 630 QKVSLLDAIPILTK 643
             V L +    + +
Sbjct: 585 SDVPLENLTETIHQ 598


>gi|46200191|ref|YP_005858.1| prolyl-tRNA synthetase [Thermus thermophilus HB27]
 gi|81830546|sp|Q72GF9|SYP_THET2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|46197819|gb|AAS82231.1| prolyl-tRNA synthetase [Thermus thermophilus HB27]
          Length = 477

 Score =  175 bits (443), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 73/406 (17%), Positives = 146/406 (35%), Gaps = 58/406 (14%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
             +     + ++ ++ +L         ++     G+ I++ +   + R  K+  ++    
Sbjct: 10  QSQDFSEWYLEVIQKAELADYGPVRGTIVV-RPYGYAIWENIQQVLDRMFKETGHQNAYF 68

Query: 297 PQVLDQHL-WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P  +      +++ H + +   +  V  A     +    A++P +      +++  ++S+
Sbjct: 69  PLFIPMSFLRKEAEHVEGFSPELAVVTHAGGEELE-EPLAVRPTSETVIGYMWSKWIRSW 127

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           R+LP  L ++G+V R E        +R   F   + H   T      E  +    ++SIY
Sbjct: 128 RDLPQLLNQWGNVVRWEMR--TRPFLRTSEFLWQEGH---TAHATREEAEEEVRRMLSIY 182

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                                                +       + + T      GA Y
Sbjct: 183 ARL--------------------------------AREYAAIPVIEGLKTEKEKFAGAVY 210

Query: 476 GPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
               E ++KD  G+  Q GT      N    F+  + +   +  +   +H   +G   RF
Sbjct: 211 TTTIEALMKD--GKALQAGTSHYLGENFARAFDIKFQDRDLQVKY---VHTTSWGLSWRF 265

Query: 535 IGIMIENFKGN----LPLWLSPIQAIVTTITSS-----AVEYAQEIANLLKSHHLSIETD 585
           IG +I     +    LP  L+PIQ ++  I         +E AQ +   L++  L +  D
Sbjct: 266 IGAIIMTHGDDRGLVLPPRLAPIQVVIVPIYKDESRERVLEAAQGLRQALQAKGLRVHLD 325

Query: 586 FRN-ETINYKIREHSIKKIPIIIICGDKEASERS-IGIRRFGSTTT 629
            R+  T  YK  E  +K +P  +  G K+  +   +   R G   T
Sbjct: 326 DRDQHTPGYKFHEWELKGVPFRVELGPKDLEQGQAVLASRLGGKET 371


>gi|261367962|ref|ZP_05980845.1| proline--tRNA ligase [Subdoligranulum variabile DSM 15176]
 gi|282569944|gb|EFB75479.1| proline--tRNA ligase [Subdoligranulum variabile DSM 15176]
          Length = 479

 Score =  175 bits (443), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 75/437 (17%), Positives = 167/437 (38%), Gaps = 59/437 (13%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
            ++++ + +   E    + +  +  + +L   +     V+     G+ I++ +   +  +
Sbjct: 4   DKKKMVEAITAQEVDFAQWYTDICTKAELVEYSSVKGFVVL-RPYGYAIWENIQKNLDAR 62

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDS-YRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
            K   +E +  P ++ + L ++ G   + +   +  V        + R  A++P +    
Sbjct: 63  FKATGHENVAMPMLMPESLLKKEGELVNGFAPEVAWVTMGGSEPLEER-LAVRPTSETLF 121

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH-VFCTKEQMFNE 403
              F+H L SYR+LP+   ++ SV R E S      +R R F   + H +  T E+   E
Sbjct: 122 CDHFSHVLHSYRDLPMLYNQWCSVVRWEKS--TRPFLRTREFWWQEGHTIHETAEEAKAE 179

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             +  N      ++     ++    T  EK  G++A +                      
Sbjct: 180 TEQQLNCYADFCENDLCIPVIKGRKTDKEKFAGAEATY---------------------- 217

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSR-FNAFYVNSHSEKCHPVM 522
                           E ++KD  G+  Q GT     +  SR ++  +    +   +P  
Sbjct: 218 --------------TIEAMMKD--GKALQSGTSHYFGDKFSRAYDVTFTGRDNTLQYPF- 260

Query: 523 IHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTI---TSSAVEYAQEIANLL 575
             +  +G+  R IG +I     +    LP  ++P+Q ++  +       +E ++E+A  +
Sbjct: 261 --QTSWGASSRLIGAIIMTHGDDDGLILPPAIAPVQVVIVPVAAHKPGVLEKSRELAAEI 318

Query: 576 KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
              +  ++ D  ++   +K  +  +K +PI +  G ++  +    + R  +   Q V   
Sbjct: 319 -GKYARVKLDDSDKQPGWKFAQWEMKGVPIRLEVGPRDIEQGQCVLVRRDTREKQFVKFE 377

Query: 636 DAIPILTK--ESLPPDC 650
           D    +    E+L  D 
Sbjct: 378 DLASAIPAALEALAKDL 394


>gi|197303940|ref|ZP_03168972.1| hypothetical protein RUMLAC_02677 [Ruminococcus lactaris ATCC
           29176]
 gi|197296908|gb|EDY31476.1| hypothetical protein RUMLAC_02677 [Ruminococcus lactaris ATCC
           29176]
          Length = 478

 Score =  175 bits (443), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 78/426 (18%), Positives = 154/426 (36%), Gaps = 58/426 (13%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEE-INT 296
            EE   + +  + RE  L   +    G + +   G+ +++ +   +  + K+   E +  
Sbjct: 12  REEDFAQWYTDVVREAKLCDYSGVK-GCMNYLPNGYALWENIQKELDARFKETGVENVYL 70

Query: 297 PQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P ++ + L  ++  H + +   +  V          R F ++P +      V++  ++SY
Sbjct: 71  PVMIPESLLQKEKDHIEGFAPEVAWVTHGGTEPLQER-FCIRPTSETLFCDVWSKTVQSY 129

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISI 414
           R+LP    ++ SV R E   +    +R R F   + H    T E+      ++  +    
Sbjct: 130 RDLPKVWNQWCSVLRWEK--TTRPFLRSREFLWQEGHTIHATYEEAEERTKQMWRVYRDF 187

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            +D     ++    T  EK  G                                    A 
Sbjct: 188 VQDVLAIPVVSGRKTESEKFAG------------------------------------AQ 211

Query: 475 YGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
                E ++ D  G+  Q GT        P+ F   Y + ++E      ++   +G   R
Sbjct: 212 DTYTIEALMHD--GKALQSGTSHFFGSAFPNAFGIQYSDKNNELHE---VYETSWGMSTR 266

Query: 534 FIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDF 586
            IG +I    ++    +P  ++P+Q +V  I       ++ A E+ + LK+     + D 
Sbjct: 267 VIGALIMVHGDDSGLVIPPRVAPVQTMVIPIAQHKEGVLDKANELLDTLKAAGYKAKIDD 326

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK--E 644
            ++   +K     I  IP  I  G K+       I R  +     VSL +    L +  E
Sbjct: 327 SDKAPGWKFSGQEILGIPTRIEIGPKDIENNQAVIVRRDTREKIVVSLDEITTKLAEVLE 386

Query: 645 SLPPDC 650
           ++  D 
Sbjct: 387 TMQKDM 392


>gi|168187192|ref|ZP_02621827.1| prolyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
 gi|169294885|gb|EDS77018.1| prolyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
          Length = 478

 Score =  175 bits (443), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 73/434 (16%), Positives = 168/434 (38%), Gaps = 60/434 (13%)

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR 284
            + +++  + +  ++E   + +  + ++ +L   A     +I     G+ I++ +  Y+ 
Sbjct: 1   MSKKKKFVEAITPMDEDFAKWYTDIVKKAELVDYASVKGCMII-RPYGYAIWENIQKYLD 59

Query: 285 RKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
            K K+  +E +  P  + + L  ++  H + +   +  V    +     R   ++P +  
Sbjct: 60  NKFKETGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWVTQGGNDTLAER-LCVRPTSET 118

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMF 401
                +   ++S+ +LP +  ++ SV R E   +    +R   F   + H    T E+  
Sbjct: 119 LFCDHYAKIIQSHNDLPKKYNQWCSVVRWEK--TTRPFLRTTEFLWQEGHTAHATAEESA 176

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E + + N+  +  ++     ++    T  EK  G+ A +                    
Sbjct: 177 RETIDMLNVYANFCENVLAIPVIKGQKTEKEKFAGAKATY-------------------- 216

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHP 520
                             E ++ D  G+  Q GT      N    FN  Y + +S+  + 
Sbjct: 217 ----------------TIESLMHD--GKALQSGTSHNFGDNFSKAFNIQYNDKNSQLQY- 257

Query: 521 VMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIAN 573
             +H+  +G   R IG +I    ++    LP  ++P+Q ++  I       ++ A+E+  
Sbjct: 258 --VHQTSWGVTTRLIGAIIMVHGDDSGLKLPPRIAPLQVVIVPIAQHKEGVLDKAEELRE 315

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            +      ++ D  ++   +K  E+ +K +P+ +  G K+     + + R  +     VS
Sbjct: 316 RISKV-ARVKVDSSDKMPGWKFNEYEMKGVPVRLEVGPKDIENNQVVLVRRDTREKIFVS 374

Query: 634 LLDA---IPILTKE 644
           + +    IP L  E
Sbjct: 375 MDELETKIPELLDE 388


>gi|261880625|ref|ZP_06007052.1| proline-tRNA ligase [Prevotella bergensis DSM 17361]
 gi|270332666|gb|EFA43452.1| proline-tRNA ligase [Prevotella bergensis DSM 17361]
          Length = 493

 Score =  174 bits (442), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 67/433 (15%), Positives = 151/433 (34%), Gaps = 70/433 (16%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
              ++  + +  L  + DL   +     +I     G+ I++ + + +    K    +   
Sbjct: 10  KRADNYSQWYNDLVMKADLAETSPVRGCMII-KPYGYAIWEKMQAALDGMFKATGVQNAY 68

Query: 296 TPQVLDQHLW-----------QQSGHWDSY---RANMFAVKCADDTIKDLRTFALKPMNC 341
            P ++ +  +           ++S     Y             D   K      ++P + 
Sbjct: 69  FPLLIPKSFFAKEAEHVAGFAKESAVVTHYRLKGTEDGKGIEVDPEAKLEEELIIRPTSE 128

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
                 + + ++SYR+LP+   ++ +V R E        +R   F   + H     EQ  
Sbjct: 129 TMIWNTYKNWIQSYRDLPILCNQWCNVMRWEMR--TRPFLRTSEFLWQEGHTAHATEQEA 186

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E  +    ++ +Y DF                      W             +      
Sbjct: 187 QEEAR---KMLKVYADFA-------------------EKW-------------MGVPVVQ 211

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHP 520
            + +      GA      E +++D  G+  Q GT   +  N    F+  ++N  ++   P
Sbjct: 212 GVKSETERFAGALDTYTIEAMMQD--GKALQSGTSHFLGQNFAKSFDVTFLNKDNK---P 266

Query: 521 VMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTIT------SSAVEYAQE 570
             +    +G   R +G +I    ++    LP  L+PIQ ++  I+       +     + 
Sbjct: 267 EYVWATSWGVSTRLMGALIMVHSDDNGLVLPPKLAPIQVVIIPISRNNEQLEAISAKLKP 326

Query: 571 IANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           + +   S  +S++ D   N+   +K  ++ +K +P+ ++ G ++    +I I R  +   
Sbjct: 327 VIDKFASLGISVKYDDSDNKRPGFKFADYELKGVPVRLVMGARDLENGTIEIMRRDTLEK 386

Query: 630 QKVSLLDAIPILT 642
           + VS    +  + 
Sbjct: 387 ENVSFDGIVERVQ 399


>gi|241957631|ref|XP_002421535.1| proline--trna ligase, putative; prolyl-tRNA synthetase, putative
           [Candida dubliniensis CD36]
 gi|223644879|emb|CAX40877.1| proline--trna ligase, putative [Candida dubliniensis CD36]
          Length = 688

 Score =  174 bits (442), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 80/407 (19%), Positives = 147/407 (36%), Gaps = 61/407 (14%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRAN 317
            D SG        + +++T+  +   +IK    +    P  + Q + + +  H + +   
Sbjct: 212 YDVSGCYILRPNSYFVWETIQDWFNARIKKMGVQNTYFPMFVSQRVLEKEKDHIEGFAPE 271

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           +  V  A ++  D    A++P +       +   ++S+R+LP++L ++ SV R E     
Sbjct: 272 VAWVTRAGNSELD-EHIAIRPTSETVMYPYYAKWIRSHRDLPLKLNQWNSVVRWEFK-HP 329

Query: 378 HGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
              +R R F   + H    TK+    E L+I +    +Y++     ++    T  EK  G
Sbjct: 330 QPFLRTREFLWQEGHTAHLTKDAAAEEVLQILDYYAGVYEELLAVPVVKGKKTENEKFAG 389

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
            D                                    Y    E     A GR  Q GT 
Sbjct: 390 GD------------------------------------YTTTVE-GFVAATGRGIQGGTS 412

Query: 497 -QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI-- 553
             +  N    FN    N    +   +  ++  +G   R IG+MI     N  L L P   
Sbjct: 413 HHLGTNFSKMFNISVENPEGSEKPRIFAYQNSWGLSTRVIGVMIMTHSDNKGLVLPPRIA 472

Query: 554 --QAIVTTIT----------SSAVEYAQEIANLLKSHHLSIETDFRN-ETINYKIREHSI 600
             QA+V  +               E A++I   L+++ + +  D+R      +K  +  +
Sbjct: 473 QYQAVVIPVGLTSKSTDAQRKEINEGAEKIEQSLRANGIRVTGDYREIYNPGWKFADWEL 532

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA---IPILTKE 644
           K +P+    G K+ +   + I R        V L +    +P L  +
Sbjct: 533 KGVPLRFEFGPKDLAGNQVTIVRRNDGKKYTVKLDELDTQVPKLLDQ 579


>gi|254796740|ref|YP_003081576.1| prolyl-tRNA synthetase [Neorickettsia risticii str. Illinois]
 gi|254589987|gb|ACT69349.1| prolyl-tRNA synthetase [Neorickettsia risticii str. Illinois]
          Length = 436

 Score =  174 bits (442), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 76/450 (16%), Positives = 149/450 (33%), Gaps = 63/450 (14%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  L        E + R H+   R      + + G+G+  W   G K+ + + S +R++
Sbjct: 8   SEYYLPLMKNVSGEVKLRSHKYSLRAG---LVKQCGAGLYSWLPLGLKVLKNIESIIRQE 64

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P +    LW++SG +  Y   +   K   D           P N     
Sbjct: 65  LDSMGMHEMLMPCIQLAKLWEESGRYSDYGRELLKFKDRHDN-----ELLFGPTNEEVIT 119

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           A+    L SY++LP  L      +R+E      GLMR R F   DA+ F   +Q      
Sbjct: 120 AIVRDDLASYKQLPKILYHIQWKFRDEIRPRF-GLMRAREFLMKDAYSFDVDQQSARISY 178

Query: 406 -KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            K++   + I+K  G   I  + +        +                      + +I 
Sbjct: 179 NKVYQSYLRIFKRLGLNPIPCRANAGVIGGSLNHEFHITTTE-----------GGEGKIF 227

Query: 465 TGVLLGEGAFYGPKFEYILKDAI-------------------------GRDWQCGTIQVD 499
               +GE      K +   + A+                          R      I+V 
Sbjct: 228 YPEEIGELVDEFCKIDPSDEHAVSVMTAKLQELSCFTEECNSSSIEDDNRICAAQGIEVG 287

Query: 500 F------NLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLW 549
                     +   A + +    K +  M    +   I R +  +IE +  +     P  
Sbjct: 288 HIFLFGEKYSAPMQARFSDRDGMKKNFYMGSYGI--GISRLLAAIIEVYSDDKGIIWPES 345

Query: 550 LSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIIC 609
           ++P +  +  +   +   A+EI + L S    +  D   ++   K     +  +P  II 
Sbjct: 346 IAPFKVGLINLHEESCGLAEEIFSKLDS----VIYDDTTDSQGVKFARMDLIGVPFQIIV 401

Query: 610 GDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
           G     + ++ ++    +  +  +  + I 
Sbjct: 402 GKNAIIDGTVELKCRLDSKRESCNFNELIS 431


>gi|116195310|ref|XP_001223467.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
 gi|88180166|gb|EAQ87634.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
          Length = 556

 Score =  174 bits (441), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 80/432 (18%), Positives = 163/432 (37%), Gaps = 59/432 (13%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
            E+  + ++++  + ++     + SG          ++ T+  + + +I++   EE N P
Sbjct: 54  TENFSQWYQEVVLKAEMIEYYTEISGFFIMRPATMYVWNTIRKWFQERIEEMGVEETNFP 113

Query: 298 QVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
             L Q   + +  H + +   +  V  A D   ++   A++P +       ++  ++S+R
Sbjct: 114 MFLSQKSLEKEKDHVEGFAPELAWVTKAGDKDLEV-PVAVRPTSEAVMYPYYSKWIRSHR 172

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF-NECLKIHNLIISIY 415
           +LP RL ++ SV R E        +R R F   + H     EQ+   E L+I  L   IY
Sbjct: 173 DLPFRLNQWNSVVRWEAK-QTTPFLRAREFLWQEGHTAHLTEQLAGEEVLQILELYAGIY 231

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           +      ++    T  EK  G                                     +Y
Sbjct: 232 EQLLAVPVVRGRKTEAEKFAGG------------------------------------YY 255

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
               E  +  + GR  Q  T        S+     V   +EK   + + +  +G   R I
Sbjct: 256 TTTVEGYIP-SNGRGIQGATSHCLGQNFSKMFDITVEDPNEKGKHINVWQNSWGLSTRVI 314

Query: 536 GIMIENFKGNLPLWLSP----IQAIVTTIT----------SSAVEYAQEIANLLKSHHLS 581
           G+M+     +  L L P    IQ+I+  +              +++  EI   +K+  + 
Sbjct: 315 GVMVMIHGDDKGLVLPPRIAKIQSILIPVGLTAKMTAEEKEKHLKHLDEIFFTIKNAGIR 374

Query: 582 IETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
            E D R+  T  +K  +  +K +P+ +  G K+A++  +   R  +     + + +    
Sbjct: 375 TEVDLRDGYTPAWKFNDWELKGVPLRLEFGPKDAAKEVVSYARRDTGEKGTIPITELTTK 434

Query: 641 LTK--ESLPPDC 650
           + +  E++  D 
Sbjct: 435 IPELLETIQQDM 446


>gi|118444161|ref|YP_878835.1| prolyl-tRNA synthetase [Clostridium novyi NT]
 gi|152016596|sp|A0Q2I3|SYP_CLONN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|118134617|gb|ABK61661.1| prolyl-tRNA synthetase [Clostridium novyi NT]
          Length = 478

 Score =  174 bits (441), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 73/434 (16%), Positives = 168/434 (38%), Gaps = 60/434 (13%)

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR 284
            + +++  + +  ++E   + +  + ++ +L   A     +I     G+ I++ +  Y+ 
Sbjct: 1   MSKKKKFVEAITPMDEDFAKWYTDIVKKAELVDYASVKGCMII-RPYGYAIWENIQKYLD 59

Query: 285 RKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
            K K+  +E +  P  + + L  ++  H + +   +  V    +     R   ++P +  
Sbjct: 60  TKFKETGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWVTQGGNDTLAER-LCVRPTSET 118

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMF 401
                +   ++S+ +LP +  ++ SV R E   +    +R   F   + H    T E+  
Sbjct: 119 LFCDHYAKIIQSHNDLPKKYNQWCSVVRWEK--TTRPFLRTTEFLWQEGHTAHATAEESA 176

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E + + N+  +  ++     ++    T  EK  G+ A +                    
Sbjct: 177 KETIDMLNVYANFCENVLAIPVIKGQKTEKEKFAGAKATY-------------------- 216

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHP 520
                             E ++ D  G+  Q GT      N    FN  Y + +S+  + 
Sbjct: 217 ----------------TIESLMHD--GKALQSGTSHNFGDNFSKAFNIQYNDKNSQLQY- 257

Query: 521 VMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIAN 573
             +H+  +G   R IG +I    ++    LP  ++P+Q ++  I       ++ A+E+  
Sbjct: 258 --VHQTSWGVTTRLIGAIIMVHGDDSGLKLPPRIAPLQVVIVPIAQHKEGVLDKAEELRQ 315

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            +      ++ D  ++   +K  E+ +K +P+ +  G K+     + + R  +     VS
Sbjct: 316 RIAKV-ARVKVDSSDKMPGWKFNEYEMKGVPVRLEVGPKDIENNQVVLVRRDTREKIFVS 374

Query: 634 LLDA---IPILTKE 644
           + +    IP L  E
Sbjct: 375 MDELETKIPELLDE 388


>gi|195054655|ref|XP_001994240.1| GH23578 [Drosophila grimshawi]
 gi|193896110|gb|EDV94976.1| GH23578 [Drosophila grimshawi]
          Length = 1706

 Score =  174 bits (441), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 88/439 (20%), Positives = 159/439 (36%), Gaps = 64/439 (14%)

Query: 227  TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
             +Q         E++    + ++  + +L     D SG        + I++++ ++   +
Sbjct: 1202 KKQTRLGLEASKEDNLPEWYSQVLTKGELIEY-YDVSGCYILRPWSYAIWKSIRNWFDAE 1260

Query: 287  IKD-DYEEINTPQ-VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
            I     +E   P  V    L ++  H   +   +  V  + ++       A++P +  G 
Sbjct: 1261 ITRSGVKECYFPIFVSKAALEREKSHIADFSPEVAWVTKSGESDL-AEPIAIRPTSETGM 1319

Query: 345  VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNE 403
               +   ++SYR+LP+RL ++ +V R E        +R R F   + H  F  K +   E
Sbjct: 1320 YPAYAKWVQSYRDLPIRLNQWNNVVRWEFKHP-QPFLRTREFLWQEGHSAFANKSEAEAE 1378

Query: 404  CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             L++  L   +Y D     ++    T  EK  G +                         
Sbjct: 1379 VLEMLELYAQVYTDLLAIPVVKGRKTEKEKFAGGN------------------------- 1413

Query: 464  NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVM 522
                       Y    E     A GR  Q  T   +  N    F+  Y +  +++     
Sbjct: 1414 -----------YTTTVE-AFISASGRAIQGATSHHLGQNFSKMFDIVYEDPETQQKQ--F 1459

Query: 523  IHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTT----ITSSAVEYA------ 568
            +++  +G   R IG+MI     N  L L P     QAIV      + +   E A      
Sbjct: 1460 VYQNSWGITTRTIGVMIMVHADNQGLVLPPHVACTQAIVVPCGITVNTKDEERAQLLGAC 1519

Query: 569  QEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGST 627
            +EI   L    +  E D+R+  +  +K     +K +PI I  G K+   + I   R  + 
Sbjct: 1520 KEIVKNLSRAGVRCEGDYRDNYSPGWKFNHWELKGVPIRIELGPKDMQAKQIVAVRRDTG 1579

Query: 628  TTQKVSLLDA---IPILTK 643
                ++L D    IP L +
Sbjct: 1580 EKMTIALDDVEKKIPALLE 1598


>gi|229823364|ref|ZP_04449433.1| hypothetical protein GCWU000282_00662 [Catonella morbi ATCC 51271]
 gi|229787139|gb|EEP23253.1| hypothetical protein GCWU000282_00662 [Catonella morbi ATCC 51271]
          Length = 479

 Score =  174 bits (441), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 68/420 (16%), Positives = 156/420 (37%), Gaps = 58/420 (13%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEE-INT 296
            +E   + + +  ++ DL   +    G + +   G++I++ +   M  + K++       
Sbjct: 4   RQEDFSKWYLQTIQQADLMDYSPVR-GCMIFKPDGYEIWEHIQKAMDARFKEEGIRNAYF 62

Query: 297 PQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P ++ +  + ++  H + +   +  V  A     + R  AL+P +       F++ ++SY
Sbjct: 63  PMLIPESFFNKEKDHIEGFSPELPWVTEAAGEKLEER-LALRPTSETIIGDAFSNWIQSY 121

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISI 414
           R+LP+ + ++ +V+R E        +R   F   + H      ++  +  +++  +   +
Sbjct: 122 RDLPLEINQWANVFRWEKK--TLPFLRTSEFLWQEGHTAHADGQEALDRTMRMLQIYKEV 179

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            +      ++    T  E+  G                                    A 
Sbjct: 180 VEGVLAVPVVDGEKTPSERFAG------------------------------------AV 203

Query: 475 YGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
                E +++D  G+  Q GT           F+  Y+N+ +E    V  H + FG   R
Sbjct: 204 STFSIEAMMQD--GKAVQAGTSHYMGTKFAEAFDIRYLNTDNE---HVYAHTSSFGVSTR 258

Query: 534 FIGIMIENFKGN----LPLWLSPIQAIVTTI-----TSSAVEYAQEIANLLKSHHLSIET 584
            IG MI     +    LP  ++P Q +   +       + ++   E+   LK+  +    
Sbjct: 259 LIGAMIMTHGDDKGLVLPPAVAPTQVVFVPVGPWQKNPAILDKIHELQAQLKAAGIRCRV 318

Query: 585 DFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           D  N +  +K  E  ++ +P+ I CG ++     + ++         V   + +  +  E
Sbjct: 319 DDSNNSPGFKFNEWELRGVPVRIECGPRDLENAQVMMKARDLDDKVAVPFDNFLASVQAE 378


>gi|322382352|ref|ZP_08056259.1| prolyl-tRNA synthetase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321153705|gb|EFX46080.1| prolyl-tRNA synthetase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 481

 Score =  174 bits (441), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 65/432 (15%), Positives = 157/432 (36%), Gaps = 58/432 (13%)

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR 284
            +  ++  + +   +E   + +  + ++ DL   +    G + +   G++I++     + 
Sbjct: 1   MSKDKQFVKEITPQQEDFSQWYIDVIKKADLMSYSPVR-GCMVFKPDGYEIWENCQRILD 59

Query: 285 RKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
              K+  +     P  + +  + ++  H + +   +  V  A     + R  A++P +  
Sbjct: 60  DMFKETGHRNAYFPLFIPESFFQKEKEHVEGFNPELPWVTEAGGEKLEER-LAVRPTSET 118

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN 402
               ++   + SYR+LP+ + ++ +V R E        +R   F   + H     E    
Sbjct: 119 MVGHMYAEWINSYRDLPLLINQWANVVRWEKR--TLPFLRTSEFLWQEGHTAHEDEADAR 176

Query: 403 -ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E +++  +  +  +D+    ++    T  EK  G                         
Sbjct: 177 KETMQMLEIYRTFVEDYLAIPVITGQKTPSEKFAG------------------------- 211

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHP 520
                      A      E ++KD  G+  Q GT      N    F+  ++N  ++    
Sbjct: 212 -----------AIDTYSIEAMMKD--GKAVQAGTSHYLGTNFAEAFDIKFLNRENQ---H 255

Query: 521 VMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTIT-----SSAVEYAQEI 571
             +H   +G   R IG MI     +    +P  ++P Q I+  I         +    E+
Sbjct: 256 EFVHTTSWGVSTRLIGAMIMAHGDDRGLVMPPKVAPTQVIMIPIGPAKTRDQVLAKTYEL 315

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
              +K     +  D R ++  +K  E+ ++ +P+ +  G ++     + +    +   + 
Sbjct: 316 QTEIKKAGFRVRVDAREQSPGWKFNEYEMRGVPVRVELGPRDMENGQVILVSRVTGEKKV 375

Query: 632 VSLLDAIPILTK 643
           V+  + +  +T+
Sbjct: 376 VAQDNLVEEITR 387


>gi|320593564|gb|EFX05973.1| prolyl-tRNA synthetase [Grosmannia clavigera kw1407]
          Length = 554

 Score =  174 bits (440), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 75/409 (18%), Positives = 148/409 (36%), Gaps = 57/409 (13%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           + ++++  + ++     + +G          I+  +  + +++I+    EE + P  L  
Sbjct: 59  QWYQEVVLKAEMIEYYNEIAGFYILRPASMYIWNVIRKWFQQRIEHMGVEETSFPMFLSA 118

Query: 303 HLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
              + +  H + +   +  V  A D   ++   A++P +       ++  ++S+R+LP+R
Sbjct: 119 KSLEKEKDHVEGFAPELAWVTKAGDKDLEV-PVAVRPTSEAVMYPYYSKWIRSHRDLPLR 177

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGF 420
           L ++ SV R E        +R R F   + H    T+E    E L+I  L   +Y+    
Sbjct: 178 LNQWNSVVRWEAK-QTTPFLRAREFLWQEGHTAHLTEELAGEEVLEILELYAGVYEQLLA 236

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
             ++    T  EK  G                                     +Y    E
Sbjct: 237 VPVVRGRKTENEKFAGG------------------------------------YYTTTVE 260

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
             +    GR  Q  T        S+     V     K     + +  +G   R IG+M+ 
Sbjct: 261 GYIPT-NGRGIQGATSHCLGQNFSKMFDITVEDPQVKGQHRHVWQNSWGLSTRVIGVMVM 319

Query: 541 NFKGNLPLWLSP----IQAIVTTIT----------SSAVEYAQEIANLLKSHHLSIETDF 586
               +  L L P    IQAI+  +           ++ V    E+A  +K+  + +E D 
Sbjct: 320 IHGDDKGLVLPPRIAKIQAILIPVGLNAKMTADEKAAHVARCDELAAQIKAAGVRVEVDV 379

Query: 587 R-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           R   T  +K  +  +K +P+ +  G K+  +  I   R  +     + L
Sbjct: 380 REGYTPAWKFNDWELKGVPLRLEFGPKDREKNVISFARRDTAEKGTIPL 428


>gi|162447162|ref|YP_001620294.1| prolyl-tRNA synthetase [Acholeplasma laidlawii PG-8A]
 gi|161985269|gb|ABX80918.1| prolyl-tRNA synthetase [Acholeplasma laidlawii PG-8A]
          Length = 474

 Score =  174 bits (440), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 69/423 (16%), Positives = 157/423 (37%), Gaps = 56/423 (13%)

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR 284
            +  ++L + +   +    + +  L  + +L   +    G I +   G+ I++ + +Y+ 
Sbjct: 1   MSKNKKLVESITSRDVDFSQWYTDLCLKAELMDYSNTQ-GFIIYRPLGYGIWENIQNYLN 59

Query: 285 RKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
            + +   ++ +  P ++ + L+ ++  H   +      V          R   ++P +  
Sbjct: 60  NEFRKTGHQNVYMPMLIPESLFQKEKDHVSGFAPETAMVTTTGVENLSER-LIIRPTSEV 118

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMF 401
                ++  +KSYR+LP    ++ SV R E   +    +R + F   + H    T E+  
Sbjct: 119 LFGTHYSKIVKSYRDLPKMYNQWCSVVRWEK--TTRPFLRGKEFLWQEGHTVHATAEEAK 176

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E  ++  +   + K+      +    T  EK  G+   +                    
Sbjct: 177 KETHQMLEVYDKLGKELLAIPFVTGRKTDKEKFAGALETY-------------------- 216

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFN-LPSRFNAFYVNSHSEKCHP 520
                             E ++ D  G+  Q GT     N     F+  ++N  +E  + 
Sbjct: 217 ----------------AIEALMHD--GQALQSGTSHYFGNEFAHAFDIKFLNDKNELEYA 258

Query: 521 VMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI--TSSAVEYAQEIANL 574
              ++  +G   R IG +I    ++    LP +++P Q ++  I      +   ++I N 
Sbjct: 259 ---YQTSWGVSTRLIGAIIMVHGDDNGLVLPPYVAPTQVVIVPIRPNEEVLSAVKQIENE 315

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           L      +  D  +++  +K  EH +K +P+ I  G ++     + +    +     V+L
Sbjct: 316 LSDK-FRVFVDDSDKSPGWKFSEHEMKGVPLRIEIGPRDLENGQVVVTFRHNYEKHTVAL 374

Query: 635 LDA 637
            D 
Sbjct: 375 TDL 377


>gi|256810346|ref|YP_003127715.1| prolyl-tRNA synthetase [Methanocaldococcus fervens AG86]
 gi|256793546|gb|ACV24215.1| prolyl-tRNA synthetase [Methanocaldococcus fervens AG86]
          Length = 455

 Score =  174 bits (440), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 73/418 (17%), Positives = 153/418 (36%), Gaps = 59/418 (14%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
                 + ++  + +++ +     G   +   G+KI +     +R  +    ++E   P 
Sbjct: 1   MEFSEWYSEILEKAEIYDVRYPIKGCGVYLPYGFKIRRYTFEIIRDLLDKSGHDEALFPM 60

Query: 299 VLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           ++ + L  +++ H   +   ++ V     T  D++  AL+P +      +    +K + +
Sbjct: 61  LIPEDLLAKEAEHIKGFEDEVYWVTHGGKTPLDVK-LALRPTSETPIYYMMKLWVKVHTD 119

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRG-FTQDDAHV-FCTKEQMFNECLKIHNLIISIY 415
           LP+++ +  + +R E       L+R+R   T  +AH    TKE+   +  +  ++    +
Sbjct: 120 LPIKIYQIVNTFRYETK-HTRPLIRLREIMTFKEAHTAHSTKEEAEEQVKEAISIYKKFF 178

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
              G   ++ K              WD                             GA Y
Sbjct: 179 DTLGIPYLISKRPE-----------WDKF--------------------------PGAEY 201

Query: 476 GPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
              F+ I  D  GR  Q  T+  +  N    F   +     +K +    ++  +G  +R 
Sbjct: 202 TMAFDTIFPD--GRTMQIATVHNLGQNFSKTFEIIFETPTGDKDYA---YQTCYGISDRV 256

Query: 535 IGIMIENFKGN----LPLWLSPIQAIVTTIT-----SSAVEYAQEIANLLKSHHLSIETD 585
           I  +I          LP  ++PIQ ++  +         +E A+E+   LK     +  D
Sbjct: 257 IASIIAIHGDEKGLILPPIVAPIQIVIIPLIFKGKEDVVMEKAKELYEKLKDK-YRVHID 315

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            R+     K  +  IK +P+ I  G K+     I + R  +    +V   +   ++ K
Sbjct: 316 DRDIRPGRKFNDWEIKGVPLRIEIGPKDIENGKITLFRRDTMEKFQVDESELEEVIEK 373


>gi|313679172|ref|YP_004056911.1| prolyl-tRNA synthetase [Oceanithermus profundus DSM 14977]
 gi|313151887|gb|ADR35738.1| prolyl-tRNA synthetase [Oceanithermus profundus DSM 14977]
          Length = 478

 Score =  174 bits (440), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 67/413 (16%), Positives = 146/413 (35%), Gaps = 57/413 (13%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
             +     +  + ++ +L         ++     G+ +++ L   + R IK+  +E    
Sbjct: 10  QSQDFSEWYIDVIQKAELVDYGPVRGTMVM-RPYGYALWENLQRELDRMIKETGHENAYF 68

Query: 297 PQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P  +      +++ H + +   +  V  A     +    A++P +      +++  + S+
Sbjct: 69  PLFIPMSFLQKEAEHVEGFAPELAVVTHAGGEELE-EPLAVRPTSETVIGYMWSKWISSW 127

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           R+LPV + ++ +V R E        +R   F   + H   T      E  +    ++ +Y
Sbjct: 128 RDLPVLMNQWANVVRWEKRP--RPFLRTTEFLWQEGH---TAHATREEAEEETRRMLGVY 182

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                                                D       + + T      GA Y
Sbjct: 183 AQL--------------------------------ARDYAAIPVWEGMKTEKEKFAGAVY 210

Query: 476 GPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
               E +++D  G+  Q GT   +  N    F   + +   E+ +   +    +G   R 
Sbjct: 211 TTTIEAMMRD--GKALQAGTSHFLGQNFARAFEITFQDQDLEEKY---VWTTSWGLSTRM 265

Query: 535 IGIMIENFKGNL----PLWLSPIQAIVTTITSS-----AVEYAQEIANLLKSHHLSIETD 585
           IG +I     +     P  L+PIQ +V  I         +E A+E+   +++  + +  D
Sbjct: 266 IGAIIMAHGDDQGLILPPRLAPIQVVVVPIYRKNTREVVLEAARELVREIRAAGVRVHLD 325

Query: 586 FRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
            R++ +  YK  E  +K +P+ I  G ++       ++       + + L D 
Sbjct: 326 DRDQYSPGYKFNEWELKGVPLRIEIGPRDVEAGHAVLKSRLGGEKEFIGLRDL 378


>gi|148642347|ref|YP_001272860.1| prolyl-tRNA synthetase [Methanobrevibacter smithii ATCC 35061]
 gi|222444465|ref|ZP_03606980.1| hypothetical protein METSMIALI_00076 [Methanobrevibacter smithii
           DSM 2375]
 gi|172048060|sp|A5UJW4|SYP_METS3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|148551364|gb|ABQ86492.1| prolyl-tRNA synthetase, ProS [Methanobrevibacter smithii ATCC
           35061]
 gi|222434030|gb|EEE41195.1| hypothetical protein METSMIALI_00076 [Methanobrevibacter smithii
           DSM 2375]
          Length = 469

 Score =  174 bits (440), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 71/412 (17%), Positives = 144/412 (34%), Gaps = 57/412 (13%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTP 297
           + E+       +  E ++        G+  W   G++I +   + ++     D+EE+  P
Sbjct: 1   MVENFSEWFHDILEEANITDSRYPIKGMAVWMPYGFQIRKYTTNLIKEVYDRDHEEVLFP 60

Query: 298 QVLDQHLWQQSG-HWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
            ++ +    + G H   +   ++ V     T       AL+P +      +++  ++S+ 
Sbjct: 61  LLVPEAELAKEGLHVKGFEDEVYWVTHGGKTQL-NEKLALRPTSETSIYPMYSLWIRSHI 119

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD-DAHV-FCTKEQMFNECLKIHNLIISI 414
           +LP++  +  + +R E       L+RVR  T   +AH    +KE+   +  +       I
Sbjct: 120 DLPLKYYQIVNTFRYETK-HTRPLIRVREITTFKEAHTAHASKEEADIQVQEHIENYKEI 178

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           +   G    + K              WD                             GA 
Sbjct: 179 FDTLGIPYTLTKRPE-----------WDKF--------------------------PGAD 201

Query: 475 YGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           Y   F+ I+ D  G+  Q GTI  +       F+  + +   E     ++++   G  +R
Sbjct: 202 YTMAFDAIMPD--GKTLQIGTIHNLGQTFAKTFDITFEDKDGEHK---LVYQTCAGLSDR 256

Query: 534 F----IGIMIENFKGNLPLWLSPIQAIVTTI-----TSSAVEYAQEIANLLKSHHLSIET 584
                IGI  +     LP  +SP Q  +  I         +   +E+    ++  L +  
Sbjct: 257 VIASAIGIHGDEKGLRLPPEISPKQITIIPILFKKGKEEVLAKCEELKKEFEAAGLRVNI 316

Query: 585 DFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
           D R+     K  +  +K  PI +  G ++         R       ++ L +
Sbjct: 317 DNRDIRPGKKFYDWELKGTPIKLELGPRDLENNKTIAMRRDQLEKIELDLDE 368


>gi|322700868|gb|EFY92620.1| prolyl-tRNA synthetase [Metarhizium acridum CQMa 102]
          Length = 556

 Score =  174 bits (440), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 78/428 (18%), Positives = 155/428 (36%), Gaps = 59/428 (13%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
            ++++  + ++    ++ SG          I+ T+  +    I++   EE + P  L + 
Sbjct: 60  WYQEVVLKAEMVEYYQEISGFFVLRPLSMHIWSTIRKWFSGHIEELGVEEASFPLFLSKT 119

Query: 304 LW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
              ++  H D +   +  V+ A D   D+   A++P +       +   ++S+R+LP+RL
Sbjct: 120 SLDKEKDHVDGFAPELAWVERAGDKKLDV-PVAIRPTSEAVMYPYYAKWIRSHRDLPLRL 178

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFE 421
            ++ SV R E        +R R F   + H    T+E    E L+I  L   +Y+     
Sbjct: 179 NQWNSVVRWEAK-QTTPFLRTREFLWQEGHTAHLTEELAGEEVLEILELYAGVYEKLLAV 237

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            ++    T  EK  G                                     +Y    E 
Sbjct: 238 PVVRGKKTENEKFAGG------------------------------------YYTTTVEG 261

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +  + GR  Q  T        S+     V     K   V + +  +G   R IG+M+  
Sbjct: 262 YIP-SNGRGIQGATSHCLGQNFSKMFQITVEDPQNKGQHVHVWQNSWGLSTRVIGVMVMV 320

Query: 542 FKGNLPLWLSP----IQAIVTTIT----------SSAVEYAQEIANLLKSHHLSIETDFR 587
              +  L L P     Q I   +               +  +++   LK   +  ++D+R
Sbjct: 321 HGDDKGLVLPPRVAQTQVIFIPVGINKNTTPEDRQKHEDQIEDMRATLKKAGVRTQSDWR 380

Query: 588 -NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK--E 644
              T  +K  +  +K +P+ +  G K+A++  +   R  +     + + D    + +  E
Sbjct: 381 EGYTPAWKFNDWEMKGVPVRLEFGPKDAAKEVVSFARRDTGEKGTIPIADIATKIPELLE 440

Query: 645 SLPPDCQK 652
           ++  D  K
Sbjct: 441 TIQADMYK 448


>gi|14601997|ref|NP_148542.1| prolyl-tRNA synthetase [Aeropyrum pernix K1]
 gi|74581728|sp|Q9Y9G0|SYP_AERPE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|5106029|dbj|BAA81340.1| prolyl-tRNA synthetase [Aeropyrum pernix K1]
          Length = 485

 Score =  174 bits (440), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 82/426 (19%), Positives = 158/426 (37%), Gaps = 60/426 (14%)

Query: 235 LYFLEESEKRDHRKLAREMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYE 292
                    R    +    +++        G+  W   G++I + ++  +R  +    +E
Sbjct: 7   REKWSSDFPRWFDWVIETAEVYDYGRYPVKGMGVWMPYGFQIRRRVLEVVRGLLDSTGHE 66

Query: 293 EINTPQVLDQHL-WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           E+  P ++ +HL  ++S H   +   ++ V        D++  AL+P +      +    
Sbjct: 67  EVLFPLLIPEHLLRRESEHIRGFEGEVYWVTHGGREELDVK-LALRPTSETSITYMETFW 125

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD-DAHVFCTK-EQMFNECLKIHN 409
           +KSYR+LP +  +  S++R E   +   ++R+R  T   +AH      E    + L+   
Sbjct: 126 IKSYRQLPKKYYQVVSIFRYETK-ATRPMIRLREVTTFKEAHTVHESFEDAERQVLEAIE 184

Query: 410 LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL 469
           +  +I+       ++ K              WD                           
Sbjct: 185 VYKAIFDRLLIPYVISKRPE-----------WDKF------------------------- 208

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG 529
             GA Y   F+ I+ D  GR  Q GT+       +R   F +    E+       +  +G
Sbjct: 209 -AGALYTIAFDTIMPD--GRALQIGTVHHLGQSFTRAFDFRIQMRDERLDH--PWQTSYG 263

Query: 530 SIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVE-------YAQEIANLLKSH 578
             +R +  +I    ++    +P  ++PIQ +V  IT    E       Y  + A  L+  
Sbjct: 264 VSDRVVASLIAVHGDDRGLVIPPSVAPIQVVVIPITPGDEEKRGKVLTYTAKAAEALEKA 323

Query: 579 HLSIETDFRN-ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
            L +  D R  E    K      K +PI +  G +EA + ++ I R  +    +V L +A
Sbjct: 324 GLRVHVDDREWERPGAKFYYWEAKGVPIRVEIGLREAEQDTLTIARRDTLEKTEVPLGEA 383

Query: 638 IPILTK 643
              + +
Sbjct: 384 GNRIRE 389


>gi|323486231|ref|ZP_08091559.1| hypothetical protein HMPREF9474_03310 [Clostridium symbiosum
           WAL-14163]
 gi|323400449|gb|EGA92819.1| hypothetical protein HMPREF9474_03310 [Clostridium symbiosum
           WAL-14163]
          Length = 483

 Score =  173 bits (439), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 69/431 (16%), Positives = 163/431 (37%), Gaps = 58/431 (13%)

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYM 283
           +W   ++L + +  ++    + +  + ++ +L   +     ++     G+ I++ + + +
Sbjct: 6   SWQKDKKLVEAITSMDVDFAQWYTDVVKKAELIDYSSVKGCMVI-KPAGYAIWENIQNEL 64

Query: 284 RRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
            R+ K+   + +  P  + + L + +  H + +   +  V          R   ++P + 
Sbjct: 65  DRRFKETGVQNVYMPMFIPESLLEKEKDHVEGFAPEVAWVTMGGLEPLQER-MCVRPTSE 123

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQM 400
                 +   ++SYR+LP    ++ SV R E   +    +R R F   + H    T EQ 
Sbjct: 124 TLFCDFYARDIQSYRDLPRLYNQWCSVVRWEK--TTRPFLRSREFLWQEGHTAHATAEQA 181

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQ 460
                 + NL     ++     ++    T  EK  G++A +                   
Sbjct: 182 EERTELMLNLYADFCEEVLAMPVVRGKKTDKEKFAGAEATY------------------- 222

Query: 461 DRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCH 519
                              E ++ D  G+  Q GT           F   Y++  ++  +
Sbjct: 223 -----------------TIEALMHD--GKALQSGTSHNFGDGFAKAFEIQYLDKDNQLKY 263

Query: 520 PVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIA 572
              +H+  +G   R IG +I    ++    LP  ++P+Q ++  I       ++ A E+ 
Sbjct: 264 ---VHQTSWGMTTRLIGAIIMVHGDDNGLVLPPRIAPVQVMIVPIQQNKEGVLDKAYELK 320

Query: 573 NLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
            +L      ++ D  +++  +K  E  ++ IP+ +  G ++ +E    + R  +     V
Sbjct: 321 EVLS--GFKVKVDDSDKSPGWKFSESEMRGIPVRVEIGPRDLAENQAVLVRRDTHEKITV 378

Query: 633 SLLDAIPILTK 643
           SL +    + +
Sbjct: 379 SLDEINEKVAE 389


>gi|288869805|ref|ZP_05976398.2| proline--tRNA ligase [Methanobrevibacter smithii DSM 2374]
 gi|288860320|gb|EFC92618.1| proline--tRNA ligase [Methanobrevibacter smithii DSM 2374]
          Length = 469

 Score =  173 bits (439), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 71/412 (17%), Positives = 144/412 (34%), Gaps = 57/412 (13%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTP 297
           + E+       +  E ++        G+  W   G++I +   + ++     D+EE+  P
Sbjct: 1   MVENFSEWFHDILEEANITDSRYPIKGMAVWMPYGFQIRKYTTNLIKEVYDRDHEEVLFP 60

Query: 298 QVLDQHLWQQSG-HWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
            ++ +    + G H   +   ++ V     T       AL+P +      +++  ++S+ 
Sbjct: 61  LLVPEAELAKEGLHVKGFEDEVYWVTHGGKTQL-NEKLALRPTSETSIYPMYSLWIRSHI 119

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD-DAHV-FCTKEQMFNECLKIHNLIISI 414
           +LP++  +  + +R E       L+RVR  T   +AH    +KE+   +  +       I
Sbjct: 120 DLPLKYYQIVNTFRYETK-HTRPLIRVREITTFKEAHTAHASKEEADIQVQEHIENYKEI 178

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           +   G    + K              WD                             GA 
Sbjct: 179 FDTLGIPYTLTKRPE-----------WDKF--------------------------PGAD 201

Query: 475 YGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           Y   F+ I+ D  G+  Q GTI  +       F+  + +   E     ++++   G  +R
Sbjct: 202 YTMAFDAIMPD--GKTLQIGTIHNLGQTFAKTFDITFEDKDGEHK---LVYQTCAGLSDR 256

Query: 534 F----IGIMIENFKGNLPLWLSPIQAIVTTI-----TSSAVEYAQEIANLLKSHHLSIET 584
                IGI  +     LP  +SP Q  +  I         +   +E+    ++  L +  
Sbjct: 257 VIASAIGIHGDEKGLRLPPEISPKQITIIPILFKKGKEEVLAKCEELKKEFEAAGLRVNI 316

Query: 585 DFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
           D R+     K  +  +K  PI +  G ++         R       ++ L +
Sbjct: 317 DNRDIRPGKKFYDWELKGTPIKLELGPRDLENNKTIAMRRDQLEKIELDLDE 368


>gi|282898001|ref|ZP_06305996.1| Threonyl-tRNA synthetase [Raphidiopsis brookii D9]
 gi|281197145|gb|EFA72046.1| Threonyl-tRNA synthetase [Raphidiopsis brookii D9]
          Length = 224

 Score =  173 bits (439), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 95/223 (42%), Positives = 140/223 (62%), Gaps = 5/223 (2%)

Query: 81  MAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQY 140
           MA AVQ ++P+ QV IGP IE+GFYYDFD  +PFS  +L  I+K+M +II R  P +++ 
Sbjct: 1   MAMAVQKLFPKAQVTIGPWIENGFYYDFDNPEPFSDKDLKAIQKEMVKIINRKLPLIREE 60

Query: 141 LSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE-WFDLCRGPHVRSTGQVKK-FF 198
           +S E+A++  E  +E YK+EIL  I  +E +T+Y  G+ W+DLC GPHV +T  +     
Sbjct: 61  VSREEAKKRIEKIQEPYKLEILADIK-QEPITIYHLGDEWWDLCAGPHVENTKDINPKAI 119

Query: 199 KLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI 258
           +L  VAGAYWRGD  +  L RIY TAW T ++L +Y    EE+ +RDHRK+ +E+ LF  
Sbjct: 120 ELESVAGAYWRGDETKAQLQRIYATAWETPEQLGEYKRRKEEALRRDHRKIGKELGLFIF 179

Query: 259 A-EDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQV 299
           +   G G+  W  KG  +   L  ++ + ++K  Y  + TP +
Sbjct: 180 SDPVGPGLPLWTPKGTLLRSILEDFLKKEQLKRGYLPVVTPIL 222


>gi|153812523|ref|ZP_01965191.1| hypothetical protein RUMOBE_02922 [Ruminococcus obeum ATCC 29174]
 gi|149831448|gb|EDM86536.1| hypothetical protein RUMOBE_02922 [Ruminococcus obeum ATCC 29174]
          Length = 477

 Score =  173 bits (439), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 70/417 (16%), Positives = 149/417 (35%), Gaps = 56/417 (13%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
           +E+   + +  + ++ +L         +      G+ I++ +   + R+ K+   + +  
Sbjct: 12  MEDDFAQWYTDVVKKAELCGYTSVKGCMAI-KPAGYAIWENIQHELDRRFKETGVQNVYM 70

Query: 297 PQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P  + + L  ++  H + +   +  V          R   ++P +       +   ++S+
Sbjct: 71  PMFIPESLLQKEKDHVEGFAPEVAWVTHGGLNELQER-LCVRPTSETLFCDFYQKDIQSH 129

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN-ECLKIHNLIISI 414
           R+LP    ++ SV R E   +    +R R F   + H      +      +++ NL    
Sbjct: 130 RDLPKVYNQWCSVVRWEK--TTRPFLRSREFLWQEGHTAHATAEEAEERTIQMLNLYADF 187

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            ++     ++    T  EK  G+ A +                                 
Sbjct: 188 CEEVLAIPVIKGQKTDKEKFAGAVATY--------------------------------- 214

Query: 475 YGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
                E ++ D  G+  Q GT           F   Y +  +   +   +H+  +G   R
Sbjct: 215 ---TIESLMHD--GKALQSGTSHNFGDGFAKAFGIQYTDKDNTLKY---VHQTSWGMTTR 266

Query: 534 FIGIMIENFKGN----LPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDF 586
            IG +I     N    LP  ++P QA++  I       +E A E+   LK+  + ++ D 
Sbjct: 267 MIGAIIMVHGDNSGLVLPPRIAPTQAVIIPIQQRKEGVLEKADELFAALKAAGIRVKVDD 326

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            + +  +K  E  ++ IP+ I CG K+       I R  +     VS  +    + +
Sbjct: 327 TDRSPGFKFAEQEMRGIPVRIECGPKDIENGQAVICRRDTREKYVVSFEELAAKVQE 383


>gi|55980084|ref|YP_143381.1| prolyl-tRNA synthetase [Thermus thermophilus HB8]
 gi|81821927|sp|Q5SM28|SYP_THET8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|14719699|pdb|1H4Q|A Chain A, Prolyl-Trna Synthetase From Thermus Thermophilus Complexed
           With Trnapro(Cgg), Atp And Prolinol
 gi|14719700|pdb|1H4Q|B Chain B, Prolyl-Trna Synthetase From Thermus Thermophilus Complexed
           With Trnapro(Cgg), Atp And Prolinol
 gi|14719702|pdb|1H4S|A Chain A, Prolyl-Trna Synthetase From Thermus Thermophilus Complexed
           With Trnapro(Cgg) And A Prolyl-Adenylate Analogue
 gi|14719703|pdb|1H4S|B Chain B, Prolyl-Trna Synthetase From Thermus Thermophilus Complexed
           With Trnapro(Cgg) And A Prolyl-Adenylate Analogue
 gi|14719710|pdb|1HC7|A Chain A, Prolyl-Trna Synthetase From Thermus Thermophilus
 gi|14719711|pdb|1HC7|B Chain B, Prolyl-Trna Synthetase From Thermus Thermophilus
 gi|14719712|pdb|1HC7|C Chain C, Prolyl-Trna Synthetase From Thermus Thermophilus
 gi|14719713|pdb|1HC7|D Chain D, Prolyl-Trna Synthetase From Thermus Thermophilus
 gi|14423353|gb|AAK62359.1|AF384553_1 prolyl-tRNA synthetase [Thermus thermophilus]
 gi|55771497|dbj|BAD69938.1| prolyl-tRNA synthetase [Thermus thermophilus HB8]
          Length = 477

 Score =  173 bits (439), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 73/406 (17%), Positives = 144/406 (35%), Gaps = 58/406 (14%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
             +     + ++ ++ +L         ++     G+ I++ +   + R  K+  ++    
Sbjct: 10  QSQDFSEWYLEVIQKAELADYGPVRGTIVV-RPYGYAIWENIQQVLDRMFKETGHQNAYF 68

Query: 297 PQVLDQHL-WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P  +      +++ H + +   +  V  A     +    A++P +      +++  ++S+
Sbjct: 69  PLFIPMSFLRKEAEHVEGFSPELAVVTHAGGEELE-EPLAVRPTSETVIGYMWSKWIRSW 127

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           R+LP  L ++G+V R E        +R   F   + H   T      E  +    ++SIY
Sbjct: 128 RDLPQLLNQWGNVVRWEMR--TRPFLRTSEFLWQEGH---TAHATREEAEEEVRRMLSIY 182

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                                                +       + + T      GA Y
Sbjct: 183 ARL--------------------------------AREYAAIPVIEGLKTEKEKFAGAVY 210

Query: 476 GPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
               E ++KD  G+  Q GT      N    F+  + +   +  +   +H   +G   RF
Sbjct: 211 TTTIEALMKD--GKALQAGTSHYLGENFARAFDIKFQDRDLQVKY---VHTTSWGLSWRF 265

Query: 535 IGIMIENFKGN----LPLWLSPIQAIVTTITSS-----AVEYAQEIANLLKSHHLSIETD 585
           IG +I     +    LP  L+PIQ ++  I         +E AQ +   L +  L +  D
Sbjct: 266 IGAIIMTHGDDRGLVLPPRLAPIQVVIVPIYKDESRERVLEAAQGLRQALLAQGLRVHLD 325

Query: 586 FRN-ETINYKIREHSIKKIPIIIICGDKEASERS-IGIRRFGSTTT 629
            R+  T  YK  E  +K +P  +  G K+      +   R G   T
Sbjct: 326 DRDQHTPGYKFHEWELKGVPFRVELGPKDLEGGQAVLASRLGGKET 371


>gi|320451068|ref|YP_004203164.1| prolyl-tRNA synthetase [Thermus scotoductus SA-01]
 gi|320151237|gb|ADW22615.1| prolyl-tRNA synthetase [Thermus scotoductus SA-01]
          Length = 477

 Score =  173 bits (439), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 76/424 (17%), Positives = 158/424 (37%), Gaps = 63/424 (14%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
             +     + ++ ++ +L         ++     G+ +++ +   + R  K+  ++    
Sbjct: 10  QSQDFSEWYLEVIQKAELADYGPVRGTIVV-RPYGYALWENIQGVLDRMFKETGHQNAYF 68

Query: 297 PQVLDQHL-WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P  +      +++ H + +   +  V  A     +    A++P +      +++  +KSY
Sbjct: 69  PLFIPMSFLKKEAEHVEGFSPELAVVTHAGGEELE-EPLAVRPTSETVIGYMWSKWIKSY 127

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISI 414
           R+LP  L ++G+V R E        +R   F   + H    T+E+   E  ++ ++   +
Sbjct: 128 RDLPQLLNQWGNVVRWELR--TRPFLRTSEFLWQEGHTAHATREEAEEEVRRMLSIYAKL 185

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            +++G   ++  + T  EK  G                                    A 
Sbjct: 186 AREYGAIPVVEGMKTEKEKFAG------------------------------------AV 209

Query: 475 YGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           Y    E +++D  G+  Q GT      N    F+  + +   +  +   +H   +G   R
Sbjct: 210 YTTTIEALMRD--GKALQSGTSHYLGENFARAFDIKFQDKDLQVKY---VHTTSWGLSWR 264

Query: 534 FIGIMIENFKGNL----PLWLSPIQAIVTTIT-----SSAVEYAQEIANLLKSHHLSIET 584
           FIG +I     +     P  L+PIQ ++  I         +E A ++   L    L +  
Sbjct: 265 FIGAIIMTHGDDQGLILPPRLAPIQVVIVPIYREESREKVLEAAFDLKQRLLQAGLRVHL 324

Query: 585 DFRN-ETINYKIREHSIKKIPIIIICGDKEASER-SIGIRRFGSTTTQKVSLLDAIPILT 642
           D R+  T  YK  E  +K +P  I  G K+     ++   R G      +   +A+P + 
Sbjct: 325 DDRDQHTPGYKFHEWELKGVPFRIELGPKDLEAGEAVLASRLGGKERLTL---EALPTVL 381

Query: 643 KESL 646
            E L
Sbjct: 382 PEKL 385


>gi|195108339|ref|XP_001998750.1| GI23457 [Drosophila mojavensis]
 gi|193915344|gb|EDW14211.1| GI23457 [Drosophila mojavensis]
          Length = 1709

 Score =  173 bits (438), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 92/451 (20%), Positives = 166/451 (36%), Gaps = 64/451 (14%)

Query: 215  PMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWK 274
            P + +   ++   +Q         E++    + ++  + +L     D SG        + 
Sbjct: 1191 PAIPKPDSSSGVKKQTRLGLEATKEDNLPDWYSQVITKGELIEY-YDVSGCYILRHWSFA 1249

Query: 275  IFQTLISYMRRKI-KDDYEEINTPQ-VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
            I++ + ++   +I +   +E   P  V    L ++  H   +   +  V  + D+     
Sbjct: 1250 IWKAIKNWFDAEITRRGVKECYFPIFVSKAALEREKDHIADFAPEVAWVTKSGDSDL-AE 1308

Query: 333  TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
              A++P +       +   ++SYR+LP+RL ++ +V R E        +R R F   + H
Sbjct: 1309 PIAVRPTSETVMYPAYAKWIQSYRDLPIRLNQWNNVVRWEFK-HPQPFLRTREFLWQEGH 1367

Query: 393  V-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
              F TK++   E L+I +L   IY D     ++    T  EK  G D             
Sbjct: 1368 TAFATKDEADKEVLEILDLYAQIYTDLLAIPVVKGRKTEKEKFAGGD------------- 1414

Query: 452  LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFY 510
                                   Y    E     A GR  Q  T   +  N    F   Y
Sbjct: 1415 -----------------------YTTTVE-AFISASGRAIQGATSHHLGQNFSKMFEIVY 1450

Query: 511  VNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTT----ITS 562
             +  +++     +H+  +G   R IG+MI     N  L L P    +QAIV      + +
Sbjct: 1451 EDPETQQKT--YVHQNSWGITTRTIGVMIMVHADNQGLVLPPHVACVQAIVVPCGITVNT 1508

Query: 563  SAVEYA------QEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEAS 615
               E A      +E+   L    +  E D+R+  +  +K     +K +PI I  G K+  
Sbjct: 1509 KDEERAELLGACKELECRLSGAGVRCEGDYRDNYSPGWKFNHWELKGVPIRIELGPKDMQ 1568

Query: 616  ERSIGIRRFGSTTTQKVSLLDA---IPILTK 643
             + I   R  +     +++ D    IP L +
Sbjct: 1569 AKQIVAVRRDTGEKLTIAMADVEKKIPALLE 1599


>gi|282881336|ref|ZP_06290016.1| proline--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
 gi|281304812|gb|EFA96892.1| proline--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
          Length = 493

 Score =  173 bits (438), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 71/446 (15%), Positives = 161/446 (36%), Gaps = 73/446 (16%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
              E+  + +  L  + DL   +     ++     G+ I++ +   + +  K+   +   
Sbjct: 10  KRSENYSQWYNDLVIKADLAEQSAVRGCMVI-KPYGYAIWEKMQQQLDKMFKETGAQNAY 68

Query: 296 TPQVLDQHLW-QQSGHWDSYRANMFAVKCA-------------DDTIKDLRTFALKPMNC 341
            P ++ +    +++ H   +      V                D   K      ++P + 
Sbjct: 69  FPLLIPKSFLSKEAEHVKGFAKECAVVTHYRLKSSEEGTGVEVDPAAKLEEELIIRPTSE 128

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
                 + + +KS+R+LP+   ++ +V R E        +R   F   + H   T     
Sbjct: 129 TIIWNTYKNWIKSWRDLPLMCNQWCNVMRWEMR--TRPFLRTSEFLWQEGH---TAHATR 183

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E       ++ +Y DF                      W             +      
Sbjct: 184 EEAEAEAQKMLKVYADFA-------------------EQW-------------MAVPVVQ 211

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHP 520
            + +      GA      E +++D  G+  Q GT   +  N    F+  Y+N  ++   P
Sbjct: 212 GVKSETERFAGALDTYTIEAMMQD--GKALQSGTSHFLGQNFAKSFDVTYLNKENK---P 266

Query: 521 VMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTIT------SSAVEYAQE 570
             +    +G   R IG +I    ++    LP  L+PIQ ++  I+       +  +  + 
Sbjct: 267 EYVWATSWGVSTRLIGALIMTHSDDNGLVLPPRLAPIQVVIVPISKTSEQLKAIHDQLKP 326

Query: 571 IANLLKSHHLSIETDFRN-ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           I + L++  ++++ D  + +   +K  ++ +K +P+ ++ G ++    +I + R  +   
Sbjct: 327 IIDGLRAMGITVKFDDNDTKRPGFKFADYELKGVPVRLVMGGRDLENNTIEVMRRDTLQK 386

Query: 630 QKVSLL---DAIPILTKESLPPDCQK 652
           + VSL    + +P L +E      +K
Sbjct: 387 ETVSLEKILEYVPKLLEEMQANILKK 412


>gi|323693976|ref|ZP_08108161.1| prolyl-tRNA synthetase [Clostridium symbiosum WAL-14673]
 gi|323501976|gb|EGB17853.1| prolyl-tRNA synthetase [Clostridium symbiosum WAL-14673]
          Length = 477

 Score =  173 bits (438), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 67/417 (16%), Positives = 156/417 (37%), Gaps = 58/417 (13%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
           ++    + +  + ++ +L   +     ++     G+ I++ + + + R+ K+   + +  
Sbjct: 14  MDVDFAQWYTDVVKKAELIDYSSVKGCMVI-KPAGYAIWENIQNELDRRFKETGVQNVYM 72

Query: 297 PQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P  + + L + +  H + +   +  V          R   ++P +       +   ++SY
Sbjct: 73  PMFIPESLLEKEKDHVEGFAPEVAWVTMGGLEPLQER-MCVRPTSETLFCDFYARDIQSY 131

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISI 414
           R+LP    ++ SV R E   +    +R R F   + H    T EQ       + NL    
Sbjct: 132 RDLPRLYNQWCSVVRWEK--TTRPFLRSREFLWQEGHTAHATAEQAEERTELMLNLYADF 189

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            ++     ++    T  EK  G++A +                                 
Sbjct: 190 CEEVLAMPVVRGKKTDKEKFAGAEATY--------------------------------- 216

Query: 475 YGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
                E ++ D  G+  Q GT           F   Y++  ++  +   +H+  +G   R
Sbjct: 217 ---TIEALMHD--GKALQSGTSHNFGDGFAKAFEIQYLDKDNQLKY---VHQTSWGMTTR 268

Query: 534 FIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDF 586
            IG +I    ++    LP  ++P+Q ++  I       ++ A E+  +L      ++ D 
Sbjct: 269 LIGAIIMVHGDDNGLVLPPRIAPVQVMIVPIQQNKEGVLDKAYELKEVLS--GFKVKVDD 326

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +++  +K  E  ++ IP+ +  G ++ +E    + R  +     VSL +    + +
Sbjct: 327 SDKSPGWKFSESEMRGIPVRVEIGPRDLAENQAVLVRRDTHEKITVSLDEINEKVAE 383


>gi|251797403|ref|YP_003012134.1| prolyl-tRNA synthetase [Paenibacillus sp. JDR-2]
 gi|247545029|gb|ACT02048.1| prolyl-tRNA synthetase [Paenibacillus sp. JDR-2]
          Length = 482

 Score =  173 bits (438), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 70/442 (15%), Positives = 166/442 (37%), Gaps = 61/442 (13%)

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR 284
            +  ++    +    E   R +  + ++ +L   +    G I +  +G+++++ +   + 
Sbjct: 1   MSKDKQFVTEITPQGEDFSRWYIDVIKKAELMDYSPVR-GCIVFRPEGYELWENIQRDLD 59

Query: 285 RKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
           R+ K+  +     P  + +  + ++  H + +   +  V  A     + R  A++P +  
Sbjct: 60  RRFKETGHRNAYFPLFIPESFFQKEKEHVEGFNPELPWVTEAAGEKLEER-LAIRPTSET 118

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMF 401
               ++   ++SYR+LP+ + ++ +V R E        +R   F   + H    T+++  
Sbjct: 119 MFGHMYAKWIQSYRDLPLLINQWANVVRWEKR--TLPFLRTSEFLWQEGHTAHETEDEAR 176

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E +++  +     ++F    ++    T  E+  G                         
Sbjct: 177 EETMRMLTVYREFVEEFLAIPVIEGEKTPSERFAG------------------------- 211

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHP 520
                      A      E ++KD  G+  Q GT           F+  Y++  +     
Sbjct: 212 -----------AVNTYSIEAMMKD--GKAVQAGTSHYLGTKFAVAFDIKYLDRENTLQ-- 256

Query: 521 VMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTIT-----SSAVEYAQEI 571
              H   +G   R IG MI    ++    LP  ++P Q I+  I         V    E+
Sbjct: 257 -FAHTTSWGVSTRLIGAMIMVHGDDRGLALPPKVAPTQVIMIPIGPAKTRDQVVGRVDEL 315

Query: 572 ANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
              LK   + ++ D R++ +  +K  E+ ++ +P+ +  G ++     + +    S   +
Sbjct: 316 YAELKKAGVRVKVDDRSDVSPGWKFNEYEMRGVPLRLELGPRDMENGQVVLASRVSGEKR 375

Query: 631 KVSLLDAIPILTKESLPPDCQK 652
            V   + +  +  E++  D Q+
Sbjct: 376 IVRQDNLLAEV--ETMLADIQR 395


>gi|239624742|ref|ZP_04667773.1| prolyl-tRNA synthetase [Clostridiales bacterium 1_7_47_FAA]
 gi|239521128|gb|EEQ60994.1| prolyl-tRNA synthetase [Clostridiales bacterium 1_7_47FAA]
          Length = 479

 Score =  173 bits (438), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 62/430 (14%), Positives = 162/430 (37%), Gaps = 56/430 (13%)

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR 284
               +++ + +  ++    + +  + ++ +L   A     ++     G+ I++ + + + 
Sbjct: 1   MADNKKMVEAITSMDVDFAQWYTDVVKKAELCDYASVKGCMVI-KPAGYAIWENIQNELD 59

Query: 285 RKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
           R+ K+   + +  P  + + L + +  H + +   +  V          R   ++P +  
Sbjct: 60  RRFKETGVQNVYMPIFIPESLLEKEKDHVEGFAPEVAWVTHGGLEPLQER-MCVRPTSET 118

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN 402
                +   + SYR+LP    ++ SV R E   +    +R R F   + H      +   
Sbjct: 119 LFCDFYAKDIHSYRDLPRVYNQWCSVVRWEK--TTRPFLRSREFLWQEGHTAHATAEEAE 176

Query: 403 -ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
              +++ N+  +  ++     ++    T  EK  G++A +                    
Sbjct: 177 ARTIQMLNVYAAFCEEVLAIPVIKGQKTDKEKFAGAEATY-------------------- 216

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHP 520
                             E ++ D  G+  Q GT           F+  + +  +   + 
Sbjct: 217 ----------------TIESLMHD--GKALQSGTSHNFGDGFAKAFDIQFTDKDNTLKY- 257

Query: 521 VMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIAN 573
             +H+  +G   R IG +I    ++    LP  ++P+Q ++  +       ++ A ++ +
Sbjct: 258 --VHQTSWGMTTRMIGALIMVHGDDNGLVLPPRIAPVQVMIVPVQQQKEGVLDKAFQLED 315

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            LK    S++TD   ++  +K  +  ++ IP+ +  G K+  +    + R  +     +S
Sbjct: 316 RLKKAGFSVKTDDSEKSPGWKFADCEMRGIPLRVEIGPKDMEKNQAVLVRRDTHEKSFIS 375

Query: 634 LLDAIPILTK 643
           L +    +++
Sbjct: 376 LDELETKVSE 385


>gi|325845496|ref|ZP_08168787.1| proline--tRNA ligase [Turicibacter sp. HGF1]
 gi|325488515|gb|EGC90933.1| proline--tRNA ligase [Turicibacter sp. HGF1]
          Length = 476

 Score =  173 bits (437), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 79/426 (18%), Positives = 165/426 (38%), Gaps = 59/426 (13%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
           ++E   + +  + ++ +L   +     +I     G+ I++ +  Y+ +K K+  +E +  
Sbjct: 12  IDEDFAQWYTDVVKKAELVDYSSVKGCMII-RPYGYAIWENIQQYLDQKFKETGHENVYM 70

Query: 297 PQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P ++ + L  +++ H + +   +  V    +     R   ++P +       ++  ++SY
Sbjct: 71  PMLIPESLLQKEADHVEGFAPEVAWVTHGGNEKLSER-LVVRPTSETLFCDHYSKIIQSY 129

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISI 414
            +LP +  ++ SV R E   +    +R   F   + H    T E+   E L + N    +
Sbjct: 130 NDLPKKYNQWCSVVRWEK--TTRPFLRTTEFLWQEGHTVHATAEEAEEETLLMLNTYAKM 187

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            ++F    ++    T  EK  G+ A +                                 
Sbjct: 188 CEEFLAIPVLKGQKTEKEKFAGAQATY--------------------------------- 214

Query: 475 YGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
                E ++ D  G+  Q GT           F+  Y + +S+  +    H+  +G   R
Sbjct: 215 ---TIESLMHD--GKALQSGTSHNFGTGFAKAFDIKYSDKNSKMQYA---HQTSWGVTTR 266

Query: 534 FIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDF 586
            IG +I    ++    LP  ++P Q ++  I       +E A E+   L S    ++ D 
Sbjct: 267 LIGAIIMVHGDSSGLVLPPRVAPTQVMIIPIAAHKEGVIEKACELQTRLASV-ARVKCDT 325

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
            ++T  +K  E+ +K IP+ +  G K+       + R  +     VSL D    + +  L
Sbjct: 326 SDKTPGWKFSEYEMKGIPVRVEIGPKDIENNQAVLVRRDTREKIIVSLDDLETKVVE--L 383

Query: 647 PPDCQK 652
             D Q+
Sbjct: 384 LEDIQQ 389


>gi|255532798|ref|YP_003093170.1| prolyl-tRNA synthetase [Pedobacter heparinus DSM 2366]
 gi|255345782|gb|ACU05108.1| prolyl-tRNA synthetase [Pedobacter heparinus DSM 2366]
          Length = 490

 Score =  173 bits (437), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 77/436 (17%), Positives = 157/436 (36%), Gaps = 74/436 (16%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
            E   + +  +  + DL        G +     G+ I++ + + + +K KD  +     P
Sbjct: 9   NEDYSQWYNDIVIKADLAE-HSSVKGCMVIKPYGYSIWEKMQAVLDQKFKDTGHSNAYFP 67

Query: 298 QVLDQHLW-QQSGHWDSYRANMFAVKCA------------DDTIKDLRTFALKPMNCPGH 344
             + +  + +++ H + +      V               D+T K      ++P +    
Sbjct: 68  LFIPKSFFSKEASHVEGFATECAVVTHYRLKNDGNGNIIVDETAKLEEELIVRPTSETII 127

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNE 403
              +   ++SYR+LP+ + ++ +V R E        +R   F   + H    T ++   E
Sbjct: 128 WNTYKGWIQSYRDLPILVNQWANVVRWEMR--TRLFLRTTEFLWQEGHTAHATADEAVEE 185

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             K+      +Y DF                      W             +       +
Sbjct: 186 TRKML----DVYADFA-------------------EQW-------------MAVPVVKGV 209

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVM 522
            T      GA      E +++D  G+  Q GT   +  N    F+  + N   +  H   
Sbjct: 210 KTPNERFAGALDTYCIEALMQD--GKALQAGTSHFLGQNFAKAFDVKFTNKEGKIEH--- 264

Query: 523 IHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVE------YAQEIA 572
           +  + +G   R +G +I    ++    LP  L+PIQ ++  I     E      +  E+ 
Sbjct: 265 VWASSWGVSTRLMGALIMAHSDDAGLVLPPKLAPIQVVIVPIYKHEEELKNITGFVDELI 324

Query: 573 NLLKSHHLSIETDFRN-ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
             LK   +S++ D R+ +   +K  E+ +K +P+ +  G ++    ++ + R  +   Q 
Sbjct: 325 AKLKRMGISVKYDDRDTQRPGFKFAEYELKGVPVRLAIGGRDMENGTVELARRDTREKQT 384

Query: 632 V---SLLDAIPILTKE 644
           V    L   I  L +E
Sbjct: 385 VLQDGLEIFIAQLLEE 400


>gi|315187358|gb|EFU21114.1| prolyl-tRNA synthetase [Spirochaeta thermophila DSM 6578]
          Length = 477

 Score =  173 bits (437), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 65/391 (16%), Positives = 145/391 (37%), Gaps = 59/391 (15%)

Query: 270 RKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDT 327
            +G+ I++ + S++ R  K+  ++    P ++ +    +++ H + +   +  V      
Sbjct: 39  PRGYAIWEKIQSHLDRMFKETGHQNAYFPLLIPESFLHKEAEHVEGFSPELAVVTHGGGE 98

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
             +     ++P +     +++   ++SYR+LP+ + ++ +V R E        +R   F 
Sbjct: 99  ALE-EPLVVRPTSETIIWSMYKKWIQSYRDLPLLINQWANVVRWEKR--TRLFLRTTEFL 155

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENI 447
             + H   T      E  +    ++ +Y+ F                             
Sbjct: 156 WQEGH---TAHATREEAEEEALRMLHVYRKF----------------------------- 183

Query: 448 MKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRF 506
                + +         T      GA      E +++D   +  Q GT   +  N    F
Sbjct: 184 ---AEEYLALPVFYGRKTESEKFAGAVTTYSIEAMMQD--KKALQAGTSHFLGQNFAKAF 238

Query: 507 NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTIT- 561
           +  +        +   +    +G   R IG +I    +N    LP  ++P QA++  I  
Sbjct: 239 DVTFQTQAGSLDY---VWATSWGVSTRLIGAVIMAHSDNRGLVLPPRIAPTQAVIIPIYT 295

Query: 562 ----SSAVEYAQEIANLLKSHHLSIETDFRN-ETINYKIREHSIKKIPIIIICGDKEASE 616
                   +YA+ +   L    LS+E D  +  +  +K  E  ++ +PI +  G ++  +
Sbjct: 296 KKTVDQVADYAKRVFARLTEAGLSVEMDLDDQNSPGWKFAEWELRGVPIRVEVGPRDMEQ 355

Query: 617 RSIGIRRFGSTTTQKVSLL---DAIPILTKE 644
               + R  +   + VS+    + IP+L +E
Sbjct: 356 EKAVLVRRDTGEKRAVSVSRLPEEIPVLLEE 386


>gi|310796673|gb|EFQ32134.1| prolyl-tRNA synthetase [Glomerella graminicola M1.001]
          Length = 565

 Score =  173 bits (437), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 77/435 (17%), Positives = 157/435 (36%), Gaps = 61/435 (14%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
              E     ++++  + ++     + SG          I+  +  +   +I+D   +E +
Sbjct: 62  KKNEDFSAWYQEVVLKAEMVEYYNEISGFFILRPASMYIWTVIRKWFSERIEDMGVDETS 121

Query: 296 TPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
            P  L     + +  H + +   +  V  A D   ++   A++P +       ++  ++S
Sbjct: 122 FPMFLSSKSLEKEKDHVEGFAPELAWVTKAGDKDLEV-PVAVRPTSEAVMYPYYSKWIRS 180

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIIS 413
           +R+LP RL ++ SV R E        +R R F   + H    T+E    E L+I  L   
Sbjct: 181 HRDLPFRLNQWNSVVRWEAK-QTTPFLRTREFLWQEGHTAHLTEELAGKEVLEILELYAG 239

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           +Y+      ++    T  EK  G                                     
Sbjct: 240 VYEQLLAVPVVRGTKTENEKFAGG------------------------------------ 263

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           +Y    E  +  + GR  Q  T        S+     V    +K   + + +  +G   R
Sbjct: 264 YYTTTVEGYIP-SNGRGIQGATSHCLGQNFSKMFDITVEDPDKKGEKIHVWQNSWGLSTR 322

Query: 534 FIGIMIENFKGNLPLWLSP----IQAIVTTIT----------SSAVEYAQEIANLLKSHH 579
            IG+M+     +  L L P    +Q ++  +               +   ++ N L+   
Sbjct: 323 VIGVMVMIHGDDKGLVLPPRIAKVQVVLIAVGITAKTTPEDRKKLEDKVDDLRNELRKAG 382

Query: 580 LSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA- 637
           +  E+D R+  T  +K  E  ++ +P+ +  G K+A++  +   R  +     V+L +  
Sbjct: 383 VRAESDLRDGYTPAWKFNEWELRGVPLRLEFGPKDAAKEVVAFARRDTGEKGSVALAELS 442

Query: 638 --IPILTKESLPPDC 650
             +P L  E++  D 
Sbjct: 443 TKVPELL-ETIQSDM 456


>gi|167771272|ref|ZP_02443325.1| hypothetical protein ANACOL_02630 [Anaerotruncus colihominis DSM
           17241]
 gi|167666523|gb|EDS10653.1| hypothetical protein ANACOL_02630 [Anaerotruncus colihominis DSM
           17241]
          Length = 478

 Score =  173 bits (437), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 70/439 (15%), Positives = 163/439 (37%), Gaps = 63/439 (14%)

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR 284
              Q+++ + +  ++E   + +  + ++ DL   +     +I     G  I++ +   + 
Sbjct: 1   MADQKKMVEAITSMDEDFAKWYTDIVKKADLADYSSVRGCMIV-RPYGCAIWENIQHILD 59

Query: 285 RKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
            + K+  +E +  P  + + L  ++  H + +   +  V    +     R   ++P +  
Sbjct: 60  TRFKELGHENVQMPMFIPEGLLQKEKDHVEGFAPEVAWVTHGGEEKLTER-LCVRPTSET 118

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMF 401
                +   + SYR+LP    ++ SV R E   +    +R   F   + H    T+++  
Sbjct: 119 LFCEHYAKIINSYRDLPKLYNQWCSVVRWEK--TTRPFLRTCEFWWQEGHTMHETQQEAM 176

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E  ++  +     ++     +     T+ E+  G++A +                    
Sbjct: 177 EETERMLGVYAEFCENSLAIPVTKGRKTKKEQFAGAEATY-------------------- 216

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSR-FNAFYVNSHSEKCHP 520
                             E ++ D  G+  Q GT     +  SR F   +    ++  +P
Sbjct: 217 ----------------TIEAMMHD--GKALQSGTSHYFGDGFSRAFGITFQGRDNKPQYP 258

Query: 521 VMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTI---TSSAVEYAQEIAN 573
              H+  +G   R IG +I     N    LP  ++P+Q +V  I       +E A+ +  
Sbjct: 259 ---HQTSWGMSTRIIGAIIMTHGDNDGLVLPPAIAPVQVVVLPIAQHKEGVLEAARAVTE 315

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            L+     ++ D  + +  +K  E+ +K +P+ +  G ++ +     + R  +     V+
Sbjct: 316 RLRGV-CRVKIDDSDNSAGWKFAEYEMKGVPLRLEMGPRDIAAGQCVVVRRDNREKTVVA 374

Query: 634 LLDAIPILTKESLPPDCQK 652
           L +       E   P+  +
Sbjct: 375 LDEL------EQRIPELLR 387


>gi|331270273|ref|YP_004396765.1| proline-tRNA ligase [Clostridium botulinum BKT015925]
 gi|329126823|gb|AEB76768.1| proline-tRNA ligase [Clostridium botulinum BKT015925]
          Length = 478

 Score =  172 bits (436), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 74/434 (17%), Positives = 165/434 (38%), Gaps = 60/434 (13%)

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR 284
            + +++  + +  ++E   + +  + ++ +L   A     +I     G+ I++ +  Y+ 
Sbjct: 1   MSKKKKFVEAITPMDEDFAKWYTDIVKKAELVDYASVKGCMII-RPYGYAIWENIQKYLD 59

Query: 285 RKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
            K K+  +E +  P  + + L  ++  H + +   +  V    +     R   ++P +  
Sbjct: 60  TKFKETGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWVTQGGNDTLAER-LCVRPTSET 118

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMF 401
                +   ++S+ +LP +  ++ SV R E   +    +R   F   + H    T E+  
Sbjct: 119 LFCDHYAKIIQSHNDLPKKYNQWCSVVRWEK--TTRPFLRTTEFLWQEGHTAHATAEESA 176

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E + + N      ++     ++    T  EK  G+ A +                    
Sbjct: 177 QETIDMLNTYADFCENVLAMPVIKGQKTEKEKFAGAKATY-------------------- 216

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHP 520
                             E ++ D  G+  Q GT      N    FN  Y + +S+  + 
Sbjct: 217 ----------------TIESLMHD--GKALQSGTSHNFGDNFSKAFNIQYNDKNSQLQY- 257

Query: 521 VMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLK 576
             +H+  +G   R IG +I    ++    LP  ++P+Q ++  I     E   E A  L+
Sbjct: 258 --VHQTSWGVTTRLIGAIIMVHGDDSGLKLPPRIAPLQVVIVPIAQ-HKEGVLEKAEELR 314

Query: 577 ---SHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
              +    ++ D  ++   +K  E+ +K +P+ +  G K+     + + R  +     VS
Sbjct: 315 SNIAKIARVKVDSSDKMPGWKFNEYEMKGVPVRLEVGPKDIENNQVVLVRRDTREKIFVS 374

Query: 634 LLDA---IPILTKE 644
           + +    IP L  +
Sbjct: 375 MDELETKIPELLDD 388


>gi|307244722|ref|ZP_07526824.1| proline--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
 gi|306491899|gb|EFM63950.1| proline--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
          Length = 481

 Score =  172 bits (436), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 77/428 (17%), Positives = 161/428 (37%), Gaps = 57/428 (13%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
            + +  + +  +E+   + +  +  + DL   A     ++     G+ +++ +  Y    
Sbjct: 4   KENQFVEAITPMEDDFAQWYTDVITKTDLVDYAPIKGFMVI-KPYGFALWEKIRDYADGL 62

Query: 287 IKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
            K+  ++ +  P ++ + L  +++ H + +   +  V    + + + R  A++P +    
Sbjct: 63  FKETGHKNVYFPLLIPESLLNKEAEHVEGFAPEVAWVTQGGNKVLEER-LAVRPTSETII 121

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQ-MFNE 403
             ++   L SYR+LP    ++ SV R E S      +R   F   + H     EQ   +E
Sbjct: 122 CTMYAKWLNSYRQLPFLYNQWNSVVRWEKS--TRPFLRTSEFLWQEGHTIHETEQEAIDE 179

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            L+       + +D     ++    +  EK  G                           
Sbjct: 180 TLQQLATYKKVAEDLMAIPVIDGKKSESEKFAG--------------------------- 212

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVM 522
                    A      E ++ D  G+  Q GT   +  +    F+  + +      HP  
Sbjct: 213 ---------ASDTYTIEAMMHD--GKALQSGTSHFLGQHFTKAFDITFSDRDGNLAHP-- 259

Query: 523 IHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITS---SAVEYAQEIANLL 575
            +   +G   R IG +I    +N    LP  ++P Q I+  I +     +E   ++A  L
Sbjct: 260 -YHTSWGISTRLIGGLIMVHSDNRGLVLPPKMAPTQVIIIPIAANKGGVMEVVDKVAADL 318

Query: 576 KSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           K+  +++E D R N +  YK  +  +K IP+ +  G K+  +      R    T  ++SL
Sbjct: 319 KAKGITVEVDDRSNYSPGYKFNDAEMKGIPVRLEIGPKDIEKNQALAFRRDELTKSEMSL 378

Query: 635 LDAIPILT 642
                 ++
Sbjct: 379 DTVADQVS 386


>gi|163785549|ref|ZP_02180122.1| threonyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159879181|gb|EDP73112.1| threonyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 222

 Score =  172 bits (436), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 80/210 (38%), Positives = 130/210 (61%), Gaps = 7/210 (3%)

Query: 16  NFPVHATGSDVAESISRSLAK--KAVAVAINGKVCDLSDPVRE-GSIEIITPEDPRSLAV 72
            F    T  ++ +++     K    V   +N ++ D+  P+R+ G++  +TP+D  SL +
Sbjct: 13  EFEDGITIKEIIQALEGEGKKIKNVVGGVLNDEIIDVHTPIRQSGNLRFLTPKDKESLEI 72

Query: 73  IRHSCAHIMAEAVQSIWP--EVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQIEKKMQEI 129
           +RHS AHIMA+A++ ++   +V + IGP  + GF+YD + E +  + ++L  IE+KM+EI
Sbjct: 73  LRHSLAHIMAQALKELYGTDKVHLGIGPTTDVGFFYDVEVEGKRLTEEDLPVIEEKMKEI 132

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILE-SIPAKENVTLYRQGEWFDLCRGPHV 188
           I RD    +Q L  E+A +LFE+ KE YKV+++   IP    +++Y+Q ++ DLCRGPH+
Sbjct: 133 IQRDCLIERQELPREEALQLFENMKEIYKVDLIRHDIPETAPISIYKQCDFVDLCRGPHI 192

Query: 189 RSTGQVKKFFKLMKVAGAYWRGDSNRPMLS 218
            STG+    FKL  +AGAYW+G    PML 
Sbjct: 193 PSTGKAPTSFKLFSIAGAYWKGKETNPMLQ 222


>gi|289423700|ref|ZP_06425499.1| proline--tRNA ligase [Peptostreptococcus anaerobius 653-L]
 gi|289155950|gb|EFD04616.1| proline--tRNA ligase [Peptostreptococcus anaerobius 653-L]
          Length = 481

 Score =  172 bits (436), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 80/433 (18%), Positives = 166/433 (38%), Gaps = 60/433 (13%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
            + +  + +  +E+   + +  +  + DL   A     ++     G+ +++ +  Y    
Sbjct: 4   KENQFVEEITPMEDDFAQWYTDVITKTDLVDYAPIKGFMVI-KPYGFALWEKIRDYADGL 62

Query: 287 IKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
            K   ++ +  P ++ + L  +++ H + +   +  V    + + + R  A++P +    
Sbjct: 63  FKQTGHKNVYFPLLIPESLLNKEAEHVEGFAPEVAWVTQGGNKVLEER-LAVRPTSETII 121

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQ-MFNE 403
             ++   L SYR+LP    ++ SV R E S      +R   F   + H     EQ   +E
Sbjct: 122 CTMYAKWLNSYRQLPFLYNQWNSVVRWEKS--TRPFLRTSEFLWQEGHTLHETEQEAIDE 179

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            L+      S+ +D     ++    +  EK  G+ A +                      
Sbjct: 180 TLQQLAAYKSVAEDLMAIPVIDGRKSESEKFAGASATY---------------------- 217

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVM 522
                           E ++ D  G+  Q GT   +  +    F+  + +   +  +P  
Sbjct: 218 --------------TIEAMMHD--GKALQSGTSHFLGQHFTKAFDITFSDREGKLANP-- 259

Query: 523 IHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITS---SAVEYAQEIANLL 575
            +   +G   R IG +I    +N    LP  ++P Q I+  I +     +E   ++A  L
Sbjct: 260 -YHTSWGISTRLIGGLIMVHSDNRGLVLPPKMAPTQVIIIPIAANKGGVMEVVDKVAADL 318

Query: 576 KSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           K+  +S+E D R+  +  YK  +  +K IP+ +  G K+  +      R    T  ++SL
Sbjct: 319 KAKGISVEVDDRDNYSPGYKFNDAEMKGIPVRLEIGPKDIEKNQALAFRRDELTKSEMSL 378

Query: 635 L---DAIPILTKE 644
               D +  L  E
Sbjct: 379 DTVVDDVAALLDE 391


>gi|288560211|ref|YP_003423697.1| prolyl-tRNA synthetase ProS [Methanobrevibacter ruminantium M1]
 gi|288542921|gb|ADC46805.1| prolyl-tRNA synthetase ProS [Methanobrevibacter ruminantium M1]
          Length = 468

 Score =  172 bits (436), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 69/417 (16%), Positives = 152/417 (36%), Gaps = 57/417 (13%)

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQ 302
                ++  + ++        G+  W   G++I +  ++  R  +  +++E+  P ++ +
Sbjct: 5   SEWFHEILEKAEITDSRYPIKGMSVWLPYGFQIRRACLNIYRDLLDSEHDEVLFPLLIPE 64

Query: 303 HLWQQSG-HWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
               + G H   +   ++ V             A++P +      +F+  ++S+ +LP++
Sbjct: 65  EELAKEGIHVKGFEDEVYWVTHGGQKEL-NEKLAIRPTSETAMYPMFSLWVRSHIDLPIK 123

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQD-DAHVFC-TKEQMFNECLKIHNLIISIYKDFG 419
             +  + +R E       L+RVR  T   +AH    + E+   +      +   ++ + G
Sbjct: 124 QYQVVNTFRYETK-HTRPLIRVREITTFAEAHTVHSSPEEAAEQVETGIEIYKELFDEMG 182

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
              ++ K             +WD                             GA Y   F
Sbjct: 183 IAYLISKRP-----------VWDKF--------------------------PGAEYTMAF 205

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRF-NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           + I+ D  G+  Q GT+    NL   F   F +   +++ +    ++  +G  +R I   
Sbjct: 206 DTIMPD--GKTLQIGTVH---NLGQTFAKTFEITFENKEGNHEYAYQTCYGISDRVIAAA 260

Query: 539 IENFKGN----LPLWLSPIQAIVTTI-----TSSAVEYAQEIANLLKSHHLSIETDFRNE 589
           I          LP  ++P Q  +  I         +    EI   L+S  + ++ D R+ 
Sbjct: 261 IAAHGDEKGLILPPRIAPKQITIIPIIFKDGGEEVMAKCLEIKKSLESKGIRVQMDTRDI 320

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
               K  +  +K  P+    G ++       + R  +    ++SL D +P   ++ L
Sbjct: 321 RPGKKFFDWELKGTPLRFELGPRDLKNNVAILGRRDTGEKIEISLEDDLPSKVEDLL 377


>gi|289192180|ref|YP_003458121.1| prolyl-tRNA synthetase [Methanocaldococcus sp. FS406-22]
 gi|288938630|gb|ADC69385.1| prolyl-tRNA synthetase [Methanocaldococcus sp. FS406-22]
          Length = 455

 Score =  172 bits (435), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 74/418 (17%), Positives = 153/418 (36%), Gaps = 62/418 (14%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
                 +  +  + +++ +     G   +   G+KI +     +R+ + +  ++E   P 
Sbjct: 1   MEFSEWYSDILEKAEIYDVRYPIKGCGVYLPYGFKIRRYTFEIIRKLLDESGHDETLFPM 60

Query: 299 VLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           ++ + L  +++ H   +   ++ V     T  D++  AL+P +      +    +K + +
Sbjct: 61  LIPEDLLAKEAEHIKGFEDEVYWVTHGGKTPLDVK-LALRPTSETPIYYMMKLWVKVHTD 119

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRG-FTQDDAHV-FCTKEQMFNECLKIHNLIISIY 415
           LP+++ +  + +R E       L+R+R   T  +AH    TKE+   +  +  ++    +
Sbjct: 120 LPIKVYQIVNTFRYETK-HTRPLIRLREIMTFKEAHTAHSTKEEAEEQVKQAISIYKKFF 178

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
              G   ++ K              WD                             GA Y
Sbjct: 179 DTLGIPYLISKRPE-----------WDKF--------------------------PGAEY 201

Query: 476 GPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
              F+ I  D  GR  Q  T+  +  N    F   +      K +    ++  +G  +R 
Sbjct: 202 TMAFDTIFPD--GRVMQIATVHNLGQNFSKTFEILFETPTGGKDYA---YQTCYGISDRV 256

Query: 535 IGIMIENFKGN----LPLWLSPIQAIVTTIT-----SSAVEYAQEIANLLKSHHLSIETD 585
           I  +I          LP  ++PIQ ++  +         +E A+E+   LK     +  D
Sbjct: 257 IASIIAIHGDEKGLILPPIVAPIQIVIVPLIFKGKEEVVMEKAKELYEKLKGK-YRVYID 315

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS---LLDAIPI 640
            R+     K  +  IK +P+ I  G K+   + I + R  +    +V    L + I  
Sbjct: 316 DRDIRPGRKFNDWEIKGVPLRIEIGPKDIENKKITLFRRDTMEKFQVDETQLEEVIEK 373


>gi|325120136|emb|CBZ55690.1| putative threonyl-tRNA synthetase [Neospora caninum Liverpool]
          Length = 608

 Score =  172 bits (435), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 103/374 (27%), Positives = 159/374 (42%), Gaps = 85/374 (22%)

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           R LP+R++EFG V+R E   +L GL R+R FTQDD H+ CT+ Q   E     + I+ +Y
Sbjct: 212 RHLPLRISEFGRVFRRERRSALCGLFRLREFTQDDGHILCTRSQAVGEITSQLSSILQLY 271

Query: 416 KD-FGFEKIMVKLSTRPEKRVGS-----------DALWDDAENIMKGVLDTIKNSSQDRI 463
              FG    ++K+S        S            ALW +AE+ +   LD       +  
Sbjct: 272 FRVFGIAPELIKVSLGTRPAKASTLPAGAADSANAALWREAESWL---LDAAARVLPENF 328

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE------- 516
                 G GAFYGPK ++ L DA GR WQ GTIQVD   P      +   HS        
Sbjct: 329 KVEREEGGGAFYGPKLDFSLPDARGRRWQTGTIQVDLLQPPGLERVFSRRHSTLYPSPPS 388

Query: 517 ----------------------------KCHPVMIHRAVFGSIERFIGIMIENFKGNLPL 548
                                           V+IHRA  GS+ERF+ +++E   G LPL
Sbjct: 389 SSSSPSSSSRSPASFSRSPSSPSSLPSSCLPLVLIHRAAVGSLERFLALLLELRNGELPL 448

Query: 549 WLSPIQAIVTTITSSAVE---YAQEIANLLK--------------------SHHLSIETD 585
           W++P++A V  ++  + E   YAQ++A LL+                    +    +  D
Sbjct: 449 WIAPVKAAVCPVSVHSRESQHYAQKVARLLRRSLDSSGAFEKEEIEERGEQASTSGVLVD 508

Query: 586 FRNETINYKIRE-HSIKKIPIIIICGDKEASERSIGI-----RR------FGSTTTQKVS 633
            R   +N K+++    ++IP++ + G +E     + +     R             Q +S
Sbjct: 509 LRPLHLNTKLKDLLGRRRIPLLFLVGPREEKTEGVTVLTQAWRTSSEDGKKDGERGQFLS 568

Query: 634 LLDAIPILTKESLP 647
           L +A+    + + P
Sbjct: 569 LNEAVRFFRELAQP 582



 Score = 46.7 bits (109), Expect = 0.012,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 1/68 (1%)

Query: 266 IFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCA 324
             +   G ++   +   +R + K   ++E+ TP +    LW++SGHW  YRANM+ ++ +
Sbjct: 17  PVFLPDGRQLLANIKGILREQQKLLQFQEVATPSLAQTGLWRRSGHWTHYRANMWTIEAS 76

Query: 325 DDTIKDLR 332
                   
Sbjct: 77  LREDGKEE 84


>gi|303388510|ref|XP_003072489.1| prolyl-tRNA synthetase [Encephalitozoon intestinalis ATCC 50506]
 gi|303301629|gb|ADM11129.1| prolyl-tRNA synthetase [Encephalitozoon intestinalis ATCC 50506]
          Length = 508

 Score =  172 bits (435), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 81/403 (20%), Positives = 157/403 (38%), Gaps = 58/403 (14%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRAN 317
            +  G      +G  +++ +  +   KI++   +E   P ++ +   + +  H +++   
Sbjct: 41  YEIKGCYVMRPQGQFVWKCIQKWFTEKIEELGVQECYFPMLVPKSTLEKEKNHVENFSPE 100

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           +  +    + +      A++P +       F+  ++S+R+LP+++ ++ SV R E  G+L
Sbjct: 101 VAWITKCGNEVL-GDPVAVRPTSETIIYPSFSKWIRSHRDLPLKINQWCSVLRWELHGTL 159

Query: 378 HGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
              +R + F   + H  F TKE+   E   I +L   IY +     ++    +  EK   
Sbjct: 160 -PFIRGKEFLWQEGHTAFLTKEESDVEVFAILDLYSRIYSELLAVPVIKGRKSESEKF-- 216

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
                                              GA Y    E  +    GR  Q GT 
Sbjct: 217 ----------------------------------GGADYTTSIEAFIP-GSGRGIQAGTS 241

Query: 497 QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP---- 552
                  S+     V++     +   +++  +G   R IGI I     NL L L P    
Sbjct: 242 HSLGQNFSKMFDIKVDTEEGSENSSFVYQNSWGLTTRSIGIAIMIHSDNLGLVLPPRVAM 301

Query: 553 IQAIVTT--ITSSAVE--------YAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIK 601
           IQ +V    IT+S+ E        Y  +I   LK+  + +  D RN  T+ +K     I+
Sbjct: 302 IQVVVIPCGITASSSEEDVESLRTYISKIHAQLKNF-VRVHVDDRNNVTVGFKFNHWEIR 360

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            +P+ +  G K+ +     + R  +   ++VS+ D    + +E
Sbjct: 361 GVPLRLEVGFKDMANSEACLVRRDTRAKKQVSVEDIGQTVMEE 403


>gi|325570709|ref|ZP_08146435.1| proline--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
 gi|325156555|gb|EGC68735.1| proline--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
          Length = 477

 Score =  172 bits (435), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 67/428 (15%), Positives = 152/428 (35%), Gaps = 60/428 (14%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTL-ISYMRRKIKDDYEEINT 296
            +      + +  ++ +L   +     +  +   G+++++ +   + R   K+       
Sbjct: 3   QKNDFTEWYIQTIQKAELMAYSPVKGSI-IFRPDGFELWEHIQEEFNRFLKKEGIRNAYF 61

Query: 297 PQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P ++ Q+ + +++ H + +   +  V    +  K     AL+P +     + F+  + SY
Sbjct: 62  PMLIPQNFFMKEADHIEGFAPELPWVTEVGNE-KLEEPLALRPTSETMIGSAFSDWINSY 120

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF-NECLKIHNLIISI 414
           R+LP  + ++ +V+R E        +R   F   + H     E+      +KI +    +
Sbjct: 121 RDLPYEINQWANVFRWEKK--TLPFLRTSEFLWQEGHTAHENEEDARQRTMKILDEYARL 178

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            ++F    +     T  E+  G                                    A 
Sbjct: 179 CEEFLAIPVYRGQKTPSERFAG------------------------------------AV 202

Query: 475 YGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
                E ++KD  G+  Q GT           F+  Y+   ++    V  H   +G   R
Sbjct: 203 DTYSIEAMMKD--GKAVQAGTSHYMGTKFAEAFDITYLTKENK---HVHAHTTSWGVSTR 257

Query: 534 FIGIMIENFKGN----LPLWLSPIQAIVTTI-----TSSAVEYAQEIANLLKSHHLSIET 584
            +G +I           P  ++P Q ++  +       + +E  +E+    K+  + +  
Sbjct: 258 LLGALIMTHGDENGLVFPPTIAPTQVVLLPVGPWKKNPAILEKLEELYANFKAKGIRVRL 317

Query: 585 DFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           D  + +  YK  E  +K   + I CG ++     + ++       Q V+L D    + +E
Sbjct: 318 DDSDNSPGYKFNEWELKGACLRIECGPRDLEAGKVMVKVRDLADKQTVALEDLEAFVDQE 377

Query: 645 --SLPPDC 650
             ++ P  
Sbjct: 378 LQAMTPRL 385


>gi|326203342|ref|ZP_08193207.1| prolyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
 gi|325986600|gb|EGD47431.1| prolyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
          Length = 478

 Score =  172 bits (435), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 73/438 (16%), Positives = 168/438 (38%), Gaps = 59/438 (13%)

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR 284
               ++L + +  + +   + +  + ++ +L   +     ++     G+ I++ L   + 
Sbjct: 1   MAKDKKLVEEITSMNDDFAQWYTDVIKKAELVDYSSVRGCMVI-KPYGYAIWENLQKALD 59

Query: 285 RKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
            + K   +E +  P  + + L  ++  H + +   +  V    D     R   ++P +  
Sbjct: 60  TRFKATGHENVYMPMFIPESLLLKEKEHVEGFAPEVAWVTHGGDEKLTER-LCVRPTSET 118

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMF 401
                +++ ++SYR+LP    ++ SV R E   +    +R   F   + H    T E+  
Sbjct: 119 LFCEHYSNSIQSYRDLPKLYNQWCSVVRWEK--TTRPFLRTLEFLWQEGHTAHATAEEAQ 176

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E +K+ N+   + ++     ++    T  EK  G+ A +                    
Sbjct: 177 EETIKMLNVYADVLENVLAIPVIKGRKTDKEKFAGAHATY-------------------- 216

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHP 520
                             E ++ D  G+  Q GT           F+  Y + +++  + 
Sbjct: 217 ----------------TIESLMHD--GKALQSGTSHNFGDGFAKAFDIQYTDKNNQLQY- 257

Query: 521 VMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTIT---SSAVEYAQEIAN 573
             +H+  +G   R IG +I    ++    LP  ++P Q I+  ++      +E A E+ +
Sbjct: 258 --VHQTSWGVTTRLIGAIIMVHGDDSGLVLPPAVAPTQLIIIPVSQHKEGVLEKANELKD 315

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            L +    ++ D  ++   +K  E+ +K +P+ +  G K+  +    + R  +     VS
Sbjct: 316 RLSAK-FRVKMDDSDKMPGWKFSEYEMKGVPMRLEIGPKDIEKNQAVLVRRDNREKIFVS 374

Query: 634 LLDAIPILTKESLPPDCQ 651
           L +    +  E+   D Q
Sbjct: 375 LDNLEETV--ENTLADIQ 390


>gi|255283096|ref|ZP_05347651.1| proline--tRNA ligase [Bryantella formatexigens DSM 14469]
 gi|255266398|gb|EET59603.1| proline--tRNA ligase [Bryantella formatexigens DSM 14469]
          Length = 479

 Score =  172 bits (435), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 67/379 (17%), Positives = 135/379 (35%), Gaps = 55/379 (14%)

Query: 270 RKGWKIFQTLISYMRRKIKDDYEE-INTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDT 327
             G+ I++ +   + R+ K+   E +  P ++ + L  ++  H + +   +  V      
Sbjct: 45  PAGYAIWENIQHELDRRFKETGVENVYLPMLIPESLLQKEKDHVEGFAPEVAWVTHGGLE 104

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
               R   ++P +       + + + SYR+LP    ++ SV R E   +    +R R F 
Sbjct: 105 PLQER-MCVRPTSETLFCDFYANDIHSYRDLPKVYNQWCSVMRWEK--TTRPFLRSREFL 161

Query: 388 QDDAHVFCTKEQMFN-ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
             + H      +      +++ N+     ++F    ++    T  EK  G++A +     
Sbjct: 162 WQEGHTAHATAEEAEERTIQMLNVYADFCEEFLAIPVIKGRKTDKEKFAGAEATY----- 216

Query: 447 IMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSR 505
                                            E ++ D  G+  Q GT           
Sbjct: 217 -------------------------------TIESLMHD--GKALQSGTSHNFGDGFAKA 243

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTI- 560
           F   Y +  +   +   +H+  +G   R IG +I     N    LP  ++P Q +V  I 
Sbjct: 244 FGIQYADKDNTLKY---VHQTSWGMTTRMIGAIIMVHGDNSGLVLPPRVAPTQVMVIPIQ 300

Query: 561 --TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERS 618
                 ++ A E+   L +  L ++ D   ++  +K  E  ++ IP+ I  G K+     
Sbjct: 301 MQKDGVLDKANEVKTALAAAGLRVKLDDSEKSPGWKFSEQEMRGIPVRIELGPKDIEAGQ 360

Query: 619 IGIRRFGSTTTQKVSLLDA 637
             I R  +       L + 
Sbjct: 361 AVIVRRDTREKLVTPLSEL 379


>gi|313212369|emb|CBY36357.1| unnamed protein product [Oikopleura dioica]
          Length = 847

 Score =  172 bits (435), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 78/401 (19%), Positives = 142/401 (35%), Gaps = 56/401 (13%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD-QHLWQQSGHWDSYRAN 317
            D SG        + I++ +  +  + IKD   E    P  +    L ++  H + +   
Sbjct: 362 YDVSGCYVLLPPSYNIWEHIKDFFDKNIKDLGVENCYFPMFVSQAALEKEKEHIEDFAPE 421

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           +  V  + DT       A++P +      ++    +S+R+LP+++ ++ +V R E     
Sbjct: 422 VAWVTRSGDTEL-AEPIAIRPTSETVMYPIYAKRCQSHRDLPIKMNQWCNVVRWEFKHPT 480

Query: 378 HGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
              +R R F   + H  F TK +   E ++I +L   +Y+D      +    T  EK  G
Sbjct: 481 -PFLRTREFLWQEGHSAFATKAEAEVEVMQILDLYRQVYEDLLAIATVPGRKTVKEKFAG 539

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
            D                                    Y    E  +K A GR  Q  T 
Sbjct: 540 GD------------------------------------YTTTVEAYIK-AAGRAIQGATS 562

Query: 497 -QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP--- 552
             +  N    FN  + +    K      ++  +G   R IG+MI     +  L + P   
Sbjct: 563 HHLGQNFSKMFNISFEDESKGKGIKEFAYQNSWGITTRTIGVMIMVHADDKGLVIPPKVS 622

Query: 553 -IQAIVTT--------ITSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKK 602
             Q ++            +      + + N LKS  +    D R++    +K  +  +K 
Sbjct: 623 RYQVVIVPCGATKTDEDKNKLFNACKALENQLKSFGIRAHADLRDDKKPGWKFNDWELKG 682

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +P+ I  G K+    S    R  +      S +  +P + K
Sbjct: 683 VPLRIEVGPKDLEANSAVFVRRDTLEKVTHSGILTVPFIAK 723


>gi|168000563|ref|XP_001752985.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162695684|gb|EDQ82026.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 544

 Score =  171 bits (434), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 68/401 (16%), Positives = 149/401 (37%), Gaps = 59/401 (14%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEI--NTPQVLDQHLWQQSGHWDSYRAN 317
            D SG        + I++++  +  ++IK    E       V ++ L ++  H + +   
Sbjct: 89  YDVSGCYILRPWSYSIWESIKDFFDKEIKKMGIENTYFPLFVSEKALTKEKDHVEGFAPE 148

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           +  V  + D+  +    A++P +      +F   ++ +R+LP+R+ ++ +V R E     
Sbjct: 149 VAWVTRSGDSELE-EPIAIRPTSETVMYPIFAKWIRGHRDLPLRINQWCNVVRWEFKHPT 207

Query: 378 HGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
              +R R F   + H  F TKE+   E  +I  L   +Y++                   
Sbjct: 208 -PFIRSREFLWQEGHTAFATKEEADVEVHQILELYRRVYEEL------------------ 248

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
                             +       + + V    G  Y    E  +  + GR  Q  T 
Sbjct: 249 ------------------LAVPVIKGVKSEVEKFAGGLYTTTVEAFIP-STGRGVQGATS 289

Query: 497 Q-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL----S 551
             +  N    F+  + + + E+ +   + +  +G   R IG+M+     N  L L    +
Sbjct: 290 HCLGQNFSKMFDILFEDENRERKN---VWQNSWGLTTRTIGVMVMIHGDNKGLVLPPRVA 346

Query: 552 PIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIII 607
           PIQ +V  +        E   ++   L+     ++ D R+  +  +K     +K +P+ I
Sbjct: 347 PIQVVVIPVPFKGIDPSEECLKVTRQLQEAGFRVKDDLRDNYSPGWKYSHWELKGVPLRI 406

Query: 608 ICGDKEASERSIGIRRFG-----STTTQKVSLLDAIPILTK 643
             G ++   + + + R          +Q + + + +  + +
Sbjct: 407 EIGPRDIENKQVRVVRRDLEDKTEGRSQDIPMANLVEKIGE 447


>gi|78777058|ref|YP_393373.1| prolyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251]
 gi|114152275|sp|Q30S93|SYP_SULDN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|78497598|gb|ABB44138.1| Prolyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251]
          Length = 435

 Score =  171 bits (434), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 68/428 (15%), Positives = 151/428 (35%), Gaps = 34/428 (7%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
            ++    H+ L R      I + G+G+  +   G  + + + + ++ ++      E+   
Sbjct: 16  SDATLPSHKFLVRGG---FINQQGAGLYNFLPLGKIVLEKIRAVVKEELDLAGCNEVQLS 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            V    LW++SG  ++    M  +       +    F L P N    V +  + + SY++
Sbjct: 73  FVTPIGLWERSGRSEAMGKEMLRIND-----RHQNEFVLSPTNEEAMVELVKNRVTSYKD 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYK 416
           LP+ L +  + +R+E     +GL+R R F   D + F +  + M  E   +      I+ 
Sbjct: 128 LPLNLYQINTKFRDEARPR-YGLLRGREFLMKDGYSFHSSTQDMIREFDLMEETYKKIFT 186

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALW---DDAENIM-------KGVLDTIKNSSQDRINTG 466
             G +  +V   +      GS       D  E+ +        G      +  +D+I+  
Sbjct: 187 RLGLDFRVVAADSGAIGGDGSKEFHVLADSGEDTLIVCQSCNYGANIETIDEFKDKIDEL 246

Query: 467 VLLGEGAFYGPKFEYILKD----AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPV 521
                      K +            +  + G I Q+     +   A + + +  +  P 
Sbjct: 247 NEKSYEELKELKIDQKCSCGANLHFKKGIEVGHIFQLGTKYSAALEANFSDENG-RSKPF 305

Query: 522 MIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTI------TSSAVEYAQEIANLL 575
            +     G       I+ +N   +  +W       +  I        + +   +++   L
Sbjct: 306 EMATFGIGVSRLVAAIIEQNHDESGCIWTKESAPYIVNIMVSNVKDEAQMSLGEDLYAKL 365

Query: 576 KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
           ++  + +  D   E   +K+++  +   P  +I G KE     + I    +  +  V   
Sbjct: 366 RAAKVDVIFDDTKERFGFKMKDAELIGFPYTLIIG-KELEGGLVQIFDRKTKESISVESS 424

Query: 636 DAIPILTK 643
            A   + +
Sbjct: 425 SAYDKIME 432


>gi|154151503|ref|YP_001405121.1| prolyl-tRNA synthetase [Candidatus Methanoregula boonei 6A8]
 gi|166980134|sp|A7I9R7|SYP_METB6 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|154000055|gb|ABS56478.1| prolyl-tRNA synthetase [Methanoregula boonei 6A8]
          Length = 478

 Score =  171 bits (434), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 72/405 (17%), Positives = 153/405 (37%), Gaps = 58/405 (14%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQ 298
           ++     + ++    ++  +     G+  W   G+ I + +  ++R  +  D++E   P 
Sbjct: 11  KQDFSEWYNEILWRAEIMDVRYPVKGLYVWFPYGFAIRKFVYQHLRELLDRDHKETLFPL 70

Query: 299 VLDQ-HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           ++ +    +++ H   +   ++ V     T  +++  AL+P +      +F   ++S+ +
Sbjct: 71  LIPEQEFMKEAEHIKGFEDEVYWVTHGGTTPLEVK-LALRPTSETAIYPMFALWVRSHAD 129

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFT--QDDAHVFCTKEQMFNECLKIHNLIISIY 415
           LP+++ +  + +R E       L+R+R  T   +   V  T ++   +      L    Y
Sbjct: 130 LPIKIYQIVNTFRYETK-QTRPLIRLREITSFMESHTVHATWDEAEIQVESEIALTREFY 188

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           ++     I+ K              WD                             GA Y
Sbjct: 189 RNLCIPIIISKRPD-----------WDKF--------------------------PGADY 211

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSR-FNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
               + I+ +  G+  Q GT+    N  SR FN  Y + + E+      ++  +G  ER 
Sbjct: 212 TIAVDAIMPN--GKTLQIGTVHHLGNHFSRTFNIQYEDKNGEQKEA---YQTCYGISERC 266

Query: 535 IGIMIENFKGNLPLWLSPI----QAIVTTIT-----SSAVEYAQEIANLLKSHHLSIETD 585
           I  +I     +  L L P     Q ++  IT        +  A ++ N L++  L +  D
Sbjct: 267 IAALISLHGDDKGLILPPTVATFQVVIVPITIGKRHEDVLAAAGKLKNDLENAGLRVTLD 326

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERS-IGIRRFGSTTT 629
            R+     K     I+ +P+ +  G ++      + + R G  TT
Sbjct: 327 TRDLRPGAKYYWWEIRGVPLRLELGPRDLDSGKAMAVTRTGEKTT 371


>gi|288927557|ref|ZP_06421404.1| proline--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108]
 gi|288330391|gb|EFC68975.1| proline--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108]
          Length = 493

 Score =  171 bits (434), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 62/400 (15%), Positives = 138/400 (34%), Gaps = 69/400 (17%)

Query: 270 RKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCA--- 324
             G+ I++ +   + R  K+   +    P ++ +  + +++ H   +      V      
Sbjct: 42  PYGYAIWEKMQQQLDRMFKETGAQNAYFPLLIPKSFFSREAEHVKGFAKECAVVTHYRLR 101

Query: 325 ----------DDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
                     D + K      ++P +       + + + S+R+LP+   ++ +V R E  
Sbjct: 102 ASEDGNSVEVDPSAKLDEELIIRPTSETIIWNTYKNWIHSWRDLPLMCNQWCNVMRWEMR 161

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
                 +R   F   + H   T      E  +    ++ +Y  F                
Sbjct: 162 --TRPFLRTSEFLWQEGH---TAHATREEAEEEAKKMLDVYAKF---------------- 200

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
                             D +       + +      GA      E +++D  G+  Q G
Sbjct: 201 ----------------AQDWMAVPVVCGVKSETERFAGALDTYTIEAMMQD--GKALQSG 242

Query: 495 TIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLW 549
           T   +  N    F+  ++N  ++   P  +    +G   R IG +I    ++    LP  
Sbjct: 243 TSHFLGQNFAKSFDVTFLNKENK---PEYVWATSWGVSTRLIGALIMTHSDDNGLVLPPK 299

Query: 550 LSPIQAIVTTIT------SSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIREHSIKK 602
           L+PIQ +V  I        +  +  Q +   L+   ++++ D   N    +K  ++ +K 
Sbjct: 300 LAPIQVVVIPIGKAGQQMQAIADKLQPVIEQLRKAGVTVKYDDSDNRRPGFKYADYELKG 359

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           IP+ I+ G ++    ++ I R  +   + +        + 
Sbjct: 360 IPVRIVMGGRDLENNTVEIMRRDTLEKETIGFEGLAEHIV 399


>gi|160934880|ref|ZP_02082266.1| hypothetical protein CLOLEP_03755 [Clostridium leptum DSM 753]
 gi|156866333|gb|EDO59705.1| hypothetical protein CLOLEP_03755 [Clostridium leptum DSM 753]
          Length = 478

 Score =  171 bits (434), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 70/428 (16%), Positives = 160/428 (37%), Gaps = 57/428 (13%)

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR 284
              Q+++ + +  +EE   + +  + ++ +L   +     +I     GW I++ +   + 
Sbjct: 1   MAEQKKMVEAITSMEEDFAKWYTDIVKKAELMDYSSVRGCMII-EPYGWAIWENIRDILD 59

Query: 285 RKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
            + K+  +E +  P  + + L  ++  H + +   +  V    +     R   ++P +  
Sbjct: 60  HEFKELGHENVAMPLFIPESLLQKEKDHVEGFAPEVAWVTHGGEEELPER-LCVRPTSET 118

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMF 401
                + + + S+R+LP    ++ SV R E   +    +R   F   + H    T ++  
Sbjct: 119 LFCDHYKNIIHSWRDLPKLYNQWCSVVRWEK--TTRPFLRSVEFYWQEGHTMHATAQEAM 176

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E  ++ N+     +      ++    T+ E+  G++A +                    
Sbjct: 177 EETERMLNVYADFCEKQLAIPVVKGRKTKKEQFAGAEATY-------------------- 216

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHP 520
                             E ++ D  G+  Q GT           F   Y +  ++  +P
Sbjct: 217 ----------------TIEALMHD--GKALQSGTSHYFGDGFARAFEITYTDKENKPQYP 258

Query: 521 VMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTI---TSSAVEYAQEIAN 573
              H+  +G   R IG +I     +    LP  ++PIQ ++  I       +E A+E+  
Sbjct: 259 ---HQTSWGMSTRIIGGIIMTHGDDNGLVLPPAVAPIQVMIIPIAQHKPGVLEKAEELRA 315

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            LK     +  D   ++  +K  ++ +K +P+ +  G K+  +    + R  +     VS
Sbjct: 316 RLKKI-CRVRMDDSEQSPGWKFSQYEMKGVPLRLEIGPKDIEKNQCVLVRRDNREKTFVS 374

Query: 634 LLDAIPIL 641
           L +    +
Sbjct: 375 LDELEAKI 382


>gi|254565877|ref|XP_002490049.1| Protein of unknown function that may interact with ribosomes, based
           on co-purification experiments [Pichia pastoris GS115]
 gi|238029845|emb|CAY67768.1| Protein of unknown function that may interact with ribosomes, based
           on co-purification experiments [Pichia pastoris GS115]
 gi|328350453|emb|CCA36853.1| prolyl-tRNA synthetase [Pichia pastoris CBS 7435]
          Length = 677

 Score =  171 bits (433), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 82/429 (19%), Positives = 153/429 (35%), Gaps = 66/429 (15%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ-VLDQ 302
            ++++  + ++     D SG        + I++ +  Y  +KIK    +    P  V  +
Sbjct: 187 WYQQILTKGEMMDY-YDVSGCYILRPASYAIWERIQEYFDKKIKRLGVQNAYFPMFVSSK 245

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            L ++  H + +   +  V  A  +  +    A++P +       +   ++S+R+LP++L
Sbjct: 246 VLEKEKDHIEGFAPEVAWVTRAGSSELE-EPIAIRPTSETVMYPYYAKWIRSHRDLPLKL 304

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFE 421
            ++ SV R E        +R R F   + H    T E+   E L+I +  + IY++    
Sbjct: 305 NQWNSVVRWEFKHP-QPFLRTREFLWQEGHTAHLTFEEANKEVLQILDYYVGIYEELLAV 363

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            ++    T  EK  G                          + T    G    Y P    
Sbjct: 364 PVVKGKKTENEKFAG-------------------------GLFTTTCEG----YIPT--- 391

Query: 482 ILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
                 GR  Q  T   +  N    FN    N        +   +  +G   R IG+M+ 
Sbjct: 392 -----TGRGIQGATSHCLGQNFSKMFNISVENPDGADKPKLFAWQNSWGLSTRVIGVMVM 446

Query: 541 NFKGNLPLWLSPI----QAIVTTIT----------SSAVEYAQEIANLLKSHHLSIETDF 586
               N  L + P     Q IV  +              +    +I   L+ + L + +D+
Sbjct: 447 VHSDNKGLVIPPRVSQYQVIVIPVGITSKTTKEEEQKILATCNKIEGKLRQNDLRVTSDY 506

Query: 587 R-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL-------DAI 638
           R N +  +K     +K IP+ I  G ++  + ++   R    T   +SL        D +
Sbjct: 507 RTNYSPGWKFSNAELKGIPLRIEVGPRDLQKNTVVAVRRDDFTKTTISLDTFEKEISDLL 566

Query: 639 PILTKESLP 647
             +  E L 
Sbjct: 567 ETMQAEMLA 575


>gi|295109529|emb|CBL23482.1| prolyl-tRNA synthetase, family I [Ruminococcus obeum A2-162]
          Length = 477

 Score =  171 bits (433), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 69/417 (16%), Positives = 148/417 (35%), Gaps = 56/417 (13%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
           ++E   + +  + ++ +L         +      G+ I++ +   +  + K+   + +  
Sbjct: 12  MDEDFAQWYTDVVKKAELCGYTSVKGCMAI-KPAGYAIWENIQHELDSRFKETGVQNVYM 70

Query: 297 PQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P  + + L  ++  H + +   +  V          R   ++P +       +   ++S+
Sbjct: 71  PMFIPESLLQKEKDHVEGFAPEVAWVTHGGLNELQER-LCVRPTSETLFCDFYQKDIQSH 129

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN-ECLKIHNLIISI 414
           R+LP    ++ SV R E   +    +R R F   + H      +      +++ NL    
Sbjct: 130 RDLPKVYNQWCSVVRWEK--TTRPFLRSREFLWQEGHTAHATAEEAEERTIQMLNLYADF 187

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            ++     ++    T  EK  G+ A +                                 
Sbjct: 188 CEEVLAIPVIKGQKTDKEKFAGAVATY--------------------------------- 214

Query: 475 YGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
                E ++ D  G+  Q GT           F   Y +  +   +   +H+  +G   R
Sbjct: 215 ---TIESLMHD--GKALQSGTSHNFGDGFAKAFGIQYTDKDNTLKY---VHQTSWGMTTR 266

Query: 534 FIGIMIENFKGN----LPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDF 586
            IG +I     N    LP  ++P QA++  I       +E A E+   LK+  + ++ D 
Sbjct: 267 MIGAIIMVHGDNSGLVLPPRIAPTQAVIIPIQQRKEGVLEKADELFAALKAAGIRVKVDD 326

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            + +  +K  E  ++ IP+ I CG K+       I R  +     VS  +    + +
Sbjct: 327 TDRSPGFKFAEQEMRGIPVRIECGPKDIENGQAVICRRDTREKYVVSFDELASKVQE 383


>gi|150866378|ref|XP_001385956.2| proline-tRNA ligase [Scheffersomyces stipitis CBS 6054]
 gi|149387634|gb|ABN67927.2| proline-tRNA ligase [Scheffersomyces stipitis CBS 6054]
          Length = 682

 Score =  171 bits (433), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 85/407 (20%), Positives = 147/407 (36%), Gaps = 61/407 (14%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRAN 317
            D SG        + +++T+  +    IK    +    P  + Q + + +  H + +   
Sbjct: 206 YDVSGCYILRPNSYAVWETIQDWFNVHIKKMGVQNSYFPMFVSQRVLEKEKDHIEGFAPE 265

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           +  V  A ++  D    A++P +       ++  ++S+R+LP++L ++ SV R E     
Sbjct: 266 VAWVTRAGNSELD-EHIAIRPTSETVMYPYYSKWIRSHRDLPLKLNQWNSVVRWEFK-HP 323

Query: 378 HGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
              +R R F   + H    TKE+   E  +I +L   IY++     ++    T  EK  G
Sbjct: 324 QPFLRTREFLWQEGHTAHLTKEEAAKEVDEILDLYARIYEELLAVPVVKGKKTENEKFAG 383

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
            D                                    Y    E     A GR  Q  T 
Sbjct: 384 GD------------------------------------YTTTVE-GFIAATGRGIQGATS 406

Query: 497 -QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP--- 552
             +  N    FN    N        V   +  +G   R IG+M+     N  L L P   
Sbjct: 407 HHLGTNFSKMFNISVENPDGADKPRVFAFQNSWGLSTRVIGVMVMTHSDNKGLVLPPRVA 466

Query: 553 -IQAIVTTIT----------SSAVEYAQEIANLLKSHHLSIETDFRN-ETINYKIREHSI 600
             QA+V  +            +  + A +I   LK+  +    D+R+  T  +K  E  +
Sbjct: 467 QTQAVVIPVGLTSKTTDEQRKAINDGAADIEARLKAVDVRAIGDYRDIYTPGWKFAEWEL 526

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA---IPILTKE 644
           K +P+ I  G K+ S     + R  +     V L +    IP + +E
Sbjct: 527 KGVPLRIEFGPKDLSSEQATVVRRDNGAKYTVKLAELETRIPEILEE 573


>gi|313905495|ref|ZP_07838859.1| prolyl-tRNA synthetase [Eubacterium cellulosolvens 6]
 gi|313469679|gb|EFR65017.1| prolyl-tRNA synthetase [Eubacterium cellulosolvens 6]
          Length = 479

 Score =  171 bits (432), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 71/439 (16%), Positives = 156/439 (35%), Gaps = 61/439 (13%)

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR 284
               ++L + +  +E+   + +  +  + DL         +      G+ I++ +   + 
Sbjct: 1   MAKDKKLVEQITSMEDDFAQWYTDVCIKADLIGYTSVKGCMAI-KPAGYAIWENIQHNLD 59

Query: 285 RKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
            + K    + +  P ++ ++L  +++   + +   +  V          R   ++P +  
Sbjct: 60  ERFKATGVKNVYMPMLIPENLLNKEAELVNGFAPEVAWVTHGGAEKLQER-LCIRPTSET 118

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN 402
                +   ++SY++LP    ++ SV R E   +    +R R F   +     T      
Sbjct: 119 LFCDFYAKDIQSYKDLPKVYNQWCSVLRWEK--TTRPFLRSREFLWQEG---HTAHATAE 173

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
           E  +    ++++Y DF                                + + +       
Sbjct: 174 EAEERTVQMLNVYADF--------------------------------LENDLAIPVVKG 201

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPV 521
             T      GA +    E ++ D  G+  Q GT    D      ++  Y +  +   H  
Sbjct: 202 QKTEKEKFAGAKHTYTVEALMHD--GKALQSGTSHNFDDIFAQAYDVQYTDKDNTLKH-- 257

Query: 522 MIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTI---TSSAVEYAQEIANL 574
            +H+  +G   R IG MI     N    LP  ++P Q ++  I       ++ A EI   
Sbjct: 258 -VHQTSWGMTTRVIGAMIMVHGDNSGLVLPPHIAPTQVMIIPIRQDAEGVLDKAVEIKEK 316

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           L +  + ++ D  ++   +K  E  ++ IP+ +  G K+    S  + R  +     VS+
Sbjct: 317 LATAGIRVDLDDTDKRPGWKFSEQEMRGIPVRVELGPKDVENGSAVLVRRDTREKLVVSI 376

Query: 635 L-------DAIPILTKESL 646
                   + +  + KE L
Sbjct: 377 DEIAEKTAELLETIQKEML 395


>gi|237842799|ref|XP_002370697.1| threonyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
 gi|211968361|gb|EEB03557.1| threonyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
          Length = 1223

 Score =  171 bits (432), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 94/335 (28%), Positives = 152/335 (45%), Gaps = 66/335 (19%)

Query: 356  RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
            R LP+R++EFG V+R E   +L GL R+R FTQDD H+ CT+EQ   E       I+ +Y
Sbjct: 908  RHLPLRISEFGRVFRRERRSALCGLFRLREFTQDDGHILCTREQAVEEIKVQLASILHLY 967

Query: 416  -KDFGFEK---------IMVKLSTRPEKRVGSDA--LWDDAENIMKGVLDTIKNSSQDRI 463
             + FG               K S R +    S+   LW  AE  +   L+  +    +  
Sbjct: 968  VQVFGISPEGVKVSLGSRPAKASRRSDASADSEDEKLWTQAEAWL---LEAAREVLPNAS 1024

Query: 464  NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
            +     G GAFYGPK ++ L D  GR WQ GT+Q                       V+I
Sbjct: 1025 SVETEEGGGAFYGPKLDFSLSDVQGRWWQTGTLQPL---------------------VLI 1063

Query: 524  HRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITS---SAVEYAQEIANLLKS--- 577
            HRA  GS+ERF+ +++E   G+LP+WL+P++A+V  ++       EYA+ +A +L+    
Sbjct: 1064 HRAAVGSLERFLALLLELRNGDLPVWLAPVKAVVCPVSVQSREIREYAERVATVLRESVA 1123

Query: 578  -HHLSIE------------TDFRNETINYKIRE-HSIKKIPIIIICGDKEASERSIGI-- 621
                S E             D R   +N K+++    ++IP++ + G ++     + +  
Sbjct: 1124 PSGFSAEKEGSEDTATGVFVDLRPLHLNTKLKDLLGRRRIPLLFLVGPRDEKAGRVTVLT 1183

Query: 622  ---RRFGSTTTQK-----VSLLDAIPILTKESLPP 648
               R       ++     +SL +A  +    + P 
Sbjct: 1184 QEWRTSSKDAAREERGRYLSLDEAARLFRDLAKPA 1218



 Score = 53.6 bits (127), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 5/102 (4%)

Query: 242 EKRDHRKLAREMDLFHIAE---DGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           E++DHR+L REM LF +      G+    +  +G ++   L S + +  +   ++++ TP
Sbjct: 699 ERKDHRELGREMGLFVLPPASDVGAVGPVFLPEGRQLLANLKSVLAQHQRLLQFQQVETP 758

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVK-CADDTIKDLRTFALKP 338
            +    LW++SGHW  YR NM+ V     D  K+      KP
Sbjct: 759 SLAQSGLWRRSGHWTHYRENMWTVSASPRDEEKEKEENGDKP 800


>gi|156333655|ref|XP_001619379.1| hypothetical protein NEMVEDRAFT_v1g151543 [Nematostella vectensis]
 gi|156202462|gb|EDO27279.1| predicted protein [Nematostella vectensis]
          Length = 175

 Score =  171 bits (432), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 72/171 (42%), Positives = 98/171 (57%), Gaps = 8/171 (4%)

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E +   + +  +Y  FGF   +  LSTRPEK +G   LW+ AE  ++  L+        
Sbjct: 6   QEIISCLDFLKHVYGVFGFTFKLN-LSTRPEKYLGKIELWNQAEKELEAALNGFGQPW-- 62

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHP 520
                +  G+GAFYGPK +  ++DA+ R  QC TIQ+DF LP RFN  YV     E+  P
Sbjct: 63  ----VLNPGDGAFYGPKIDIQIQDALRRYHQCATIQLDFQLPERFNLTYVTGEGDERKRP 118

Query: 521 VMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
           V++HRA+ GS+ER I I+ E+F G  P WLSP QAIV  I     EYAQ++
Sbjct: 119 VIVHRAILGSVERMIAILTESFGGKWPFWLSPRQAIVIPIGPKYDEYAQKV 169


>gi|303238788|ref|ZP_07325320.1| prolyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
 gi|302593667|gb|EFL63383.1| prolyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
          Length = 481

 Score =  171 bits (432), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 71/432 (16%), Positives = 163/432 (37%), Gaps = 56/432 (12%)

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISY 282
            + N  ++L + +  ++    + +  + ++ DL   +     +I     G+ I++ +   
Sbjct: 1   MSNNKDKKLVEAITSMDVDFAQWYTDIVKKADLVDYSSVRGCMII-RPYGYAIWENIQKT 59

Query: 283 MRRKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
           +  + K+  +E +  P  + + L  ++  H + +   +  V              ++P +
Sbjct: 60  LDARFKETGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGQEEL-AEKLCVRPTS 118

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQ 399
                  +++ ++SYR+LP    ++ SV R E   +    +R   F   + H    T E 
Sbjct: 119 ETLFCDHYSNIIQSYRDLPKLYNQWCSVVRWEK--TTRPFLRTVEFLWQEGHTAHATAED 176

Query: 400 MFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSS 459
              E +K+ N+     +      ++    T  EK  G+ A +                  
Sbjct: 177 AQEETIKMLNVYADFCEKVLAIPVIKGQKTDKEKFAGAKATF------------------ 218

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKC 518
                               E ++ D  G+  Q GT           F   Y + +++  
Sbjct: 219 ------------------TIESLMHD--GKALQSGTSHNFGDGFAQAFGIQYTDQNNQLQ 258

Query: 519 HPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTIT---SSAVEYAQEI 571
           +   +H+  +G   R IG +I    ++    LP  ++PIQ +V  ++      +E A  I
Sbjct: 259 Y---VHQTSWGVSTRLIGGIIMVHGDDNGLVLPPKIAPIQVVVIPVSQHKEGVLEKAYAI 315

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
            + L +  + ++ D  ++   +K  E+ +K +PI +  G K+  +    +    S     
Sbjct: 316 RDRLAAKGIRVKIDDSDKMPGWKYSEYEMKGVPIRLEIGPKDIEKNQAVLVTRVSREKLF 375

Query: 632 VSLLDAIPILTK 643
           +SL +    +++
Sbjct: 376 ISLDELEGKVSE 387


>gi|315608143|ref|ZP_07883135.1| proline--tRNA ligase [Prevotella buccae ATCC 33574]
 gi|315250112|gb|EFU30109.1| proline--tRNA ligase [Prevotella buccae ATCC 33574]
          Length = 493

 Score =  171 bits (432), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 71/443 (16%), Positives = 157/443 (35%), Gaps = 72/443 (16%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
              ++  + +  L  + DL   +     +I     G+ I++ +   + +  K+   +   
Sbjct: 10  KRADNYSQWYNDLVVKADLAEQSPVRGCMII-KPYGFAIWEKMKEQLDKMFKETGAQNAY 68

Query: 296 TPQVLDQHLW-QQSGHWDSYRANMFAVKCA-------------DDTIKDLRTFALKPMNC 341
            P ++ +    +++ H   +      V                D   +      ++P + 
Sbjct: 69  FPLLIPKSFLSREAEHVKGFAKECAVVTHYRLKSSEDGCSVEVDPAARLDEELVIRPTSE 128

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
                 + + + S+R+LP+   ++ +V R E        +R   F   + H   T     
Sbjct: 129 TIIWNTYKNWIHSWRDLPIMCNQWCNVMRWEMR--TRPFLRTSEFLWQEGH---TAHATR 183

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E  +    ++ +Y  F                                  + +      
Sbjct: 184 EEAEEEAKKMLHVYAKF--------------------------------AEEWMAVPVVQ 211

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHP 520
            + +      GA      E +++D  G+  Q GT   +  N    F+  Y+N  ++   P
Sbjct: 212 GVKSETERFAGALDTYTIEAMMQD--GKALQSGTSHFLGQNFAKSFDVTYLNKDNK---P 266

Query: 521 VMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVEY------AQE 570
             +    +G   R +G +I    ++    LP  L+PIQ ++  IT  A +        Q 
Sbjct: 267 EYVWATSWGVSTRLMGALIMVHSDDNGLVLPPKLAPIQVVIIPITKGADQLQAINAKLQP 326

Query: 571 IANLLKSHHLSIETDF-RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           + + L+   +S++ D   N+   +K  ++ +K +P+ ++ G ++  + +I I R  +   
Sbjct: 327 VIDRLRDMGISVKYDDADNKRPGFKFADYELKGVPVRLVMGGRDLEDNTIEIMRRDTLEK 386

Query: 630 QKVSLLDAIPILTKESLPPDCQK 652
           + VS       +  E L  D QK
Sbjct: 387 ESVSFDGIAERV--EGLLEDIQK 407


>gi|254458440|ref|ZP_05071865.1| prolyl-tRNA synthetase [Campylobacterales bacterium GD 1]
 gi|207084748|gb|EDZ62035.1| prolyl-tRNA synthetase [Campylobacterales bacterium GD 1]
          Length = 434

 Score =  171 bits (432), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 78/436 (17%), Positives = 153/436 (35%), Gaps = 50/436 (11%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
            ++    H+ L R      I + G+G+  +   G  + + + + ++ ++      E+   
Sbjct: 16  NDATLPSHQFLVRGG---FINQQGAGLYNFLPLGKIVLEKIRTIVKEELDMAGCNEVQLS 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            V    LW +SG  D+    M  ++      +    F L P N    V +  + + SY++
Sbjct: 73  FVTPIGLWDRSGRADAMGKEMLRIQD-----RHQNDFVLSPTNEEAMVELVKNRVTSYKD 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYK 416
           LP+ L +  + +R+E     +GL+R R F   D + F  + E M  E   +      I+ 
Sbjct: 128 LPLNLYQINTKFRDEARPR-YGLLRGREFLMKDGYSFHASTEDMIREFDLMEETYKKIFT 186

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENI---------------------MKGVLDTI 455
             G +  +V+  +      GS      A++                       +  +D +
Sbjct: 187 RLGLDFRVVQADSGAIGGEGSKEFHVLADSGEDTIIVCESCDYGANIETIFDNEEEVDAL 246

Query: 456 KNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS 515
              + + + T   + E    G    +     +G  +Q GT           +A   N   
Sbjct: 247 NEKTYEELQTK-EISEKCSCGGNLSFKKGIEVGHIFQLGT--------KYSSALEANFSD 297

Query: 516 EKCHPVMIHRAVFGS-IERFIGIMIE-NFKGNLPLWLSPIQAIVTTI------TSSAVEY 567
           E   P     A FG  + R +  +IE N   N  +W          I        + +  
Sbjct: 298 ENGKPRPFEMATFGIGVSRLVASVIEQNHDENGCIWTKETAPYTINIMVSNIKDETQMTL 357

Query: 568 AQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGST 627
            +E+   L   ++    D R E   +K+++  +   P  +I G KE     + +    + 
Sbjct: 358 GEELYLKLLGENVEAMFDDRKERFGFKMKDAELIGFPYTVIIG-KELDNGLVQVYDRKTQ 416

Query: 628 TTQKVSLLDAIPILTK 643
               V   D    + +
Sbjct: 417 EKISVKTGDIYKHIME 432


>gi|126697616|ref|YP_001086513.1| prolyl-tRNA synthetase [Clostridium difficile 630]
 gi|255099208|ref|ZP_05328185.1| prolyl-tRNA synthetase [Clostridium difficile QCD-63q42]
 gi|255304991|ref|ZP_05349163.1| prolyl-tRNA synthetase [Clostridium difficile ATCC 43255]
 gi|122974211|sp|Q18CD7|SYP2_CLOD6 RecName: Full=Prolyl-tRNA synthetase 2; AltName: Full=Proline--tRNA
           ligase 2; Short=ProRS 2
 gi|115249053|emb|CAJ66864.1| Prolyl-tRNA synthetase [Clostridium difficile]
          Length = 481

 Score =  170 bits (431), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 72/429 (16%), Positives = 164/429 (38%), Gaps = 57/429 (13%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
            +++  + +  +E+   + +  +  + DL   A     ++     G+ +++ +  +M +K
Sbjct: 4   NEKQFVEEITKMEDDFPQWYTDVITKTDLVDYAPVKGFMVV-KPYGYALWEKMQEFMDKK 62

Query: 287 IKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
            K+  ++    P ++ + L  +++ H + +   +  V    +   + R   ++P +    
Sbjct: 63  FKETGHKNCYFPLLIPESLLNKEAEHVEGFAPEVAWVTHGGNKKLEER-LCVRPTSETII 121

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNE 403
             ++   LKSYRELP    ++ SV R E S      +R   F   + H    T E+   E
Sbjct: 122 CTMYAKWLKSYRELPYLYNQWCSVVRWEKS--TRPFLRTSEFLWQEGHTLHETAEEAQEE 179

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            ++   +  ++ ++     ++    +  EK  G +  +                      
Sbjct: 180 TIQQLEVYKALCEELLAMPVVAGQKSESEKFAGGERTY---------------------- 217

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVM 522
                           E ++ D  G+  Q GT   +  +    F+  + +      +P  
Sbjct: 218 --------------TIEAMMHD--GKALQSGTSHFLGQHFTKAFDITFADREGNLANP-- 259

Query: 523 IHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSS---AVEYAQEIANLL 575
            +   +G+  R IG +I    +N    LP  ++PIQ ++  I +     +E   +I   L
Sbjct: 260 -YHTSWGASTRLIGGLIMTHSDNRGLVLPPRVAPIQVVIVPIAAKKGNVMETVDKIYADL 318

Query: 576 KSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           K+  +++E D R+  T  +K  E  +K +P+ +  G K+       + R  +     + L
Sbjct: 319 KAKGVAVEVDDRDNYTTGWKFNEWEMKGVPVRVEIGPKDIENNQAMVFRRDTLEKDSMPL 378

Query: 635 LDAIPILTK 643
                 +  
Sbjct: 379 EGLADAICD 387


>gi|85076319|ref|XP_955907.1| hypothetical protein NCU04449 [Neurospora crassa OR74A]
 gi|28916937|gb|EAA26671.1| hypothetical protein NCU04449 [Neurospora crassa OR74A]
 gi|40882172|emb|CAF05998.1| probable proline-tRNA ligase [Neurospora crassa]
          Length = 558

 Score =  170 bits (431), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 79/437 (18%), Positives = 155/437 (35%), Gaps = 62/437 (14%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
              E+  + ++++  + +L     + SG          I+  +  + +  I +   EE N
Sbjct: 52  KKSENFSQWYQEVVLKAELIEYYTEISGFFIMRPATMYIWNVIRKWFQEHIDELGVEETN 111

Query: 296 TPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV---FNHG 351
            P  L Q   + +  H + +   +  V  A D   ++   A++P +          +   
Sbjct: 112 FPMFLSQKSLEKEKEHVEGFAPELAWVTKAGDKDLEV-PVAVRPTSEAVMYPWKPDYAKW 170

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF-NECLKIHNL 410
           ++S+R+LP RL ++ SV R E        +R R F   + H     EQ    E L+I   
Sbjct: 171 IRSHRDLPFRLNQWNSVVRWEAK-QTTPFLRAREFMWQEGHTAHLTEQAAGEEVLQILEF 229

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
              +Y+      ++    T  EK  G                                  
Sbjct: 230 YAGVYEQLLAVPVVRGRKTEAEKFAGG--------------------------------- 256

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
              +Y    E  +  + GR  Q  T        S+     V   +EK   + + +  +G 
Sbjct: 257 ---YYTTTVEGYIP-SNGRGIQGATSHCLGQNFSKMFDITVEDPAEKGKHIHVWQNSWGL 312

Query: 531 IERFIGIMIENFKGNLPLWLSP----IQAIVTTIT----------SSAVEYAQEIANLLK 576
             R IG+M+     +  L L P    IQ+I+  +            + ++   E+   LK
Sbjct: 313 STRVIGVMVMIHGDDKGLVLPPRIAKIQSILIPVGLTAKMSAEEKDAHMKKVDELLATLK 372

Query: 577 SHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
              +  + D R   T  +K  +  +K +P+ I  G K+A++  +   R  +     + + 
Sbjct: 373 KAGVRADVDTREGYTPAWKFNDWELKGVPLRIEFGPKDAAKDVVSYARRDTGEKGTIPIA 432

Query: 636 DAIPILTK--ESLPPDC 650
           +    + +  E++  D 
Sbjct: 433 ELTTKVPELLETIQQDM 449


>gi|260831390|ref|XP_002610642.1| hypothetical protein BRAFLDRAFT_117885 [Branchiostoma floridae]
 gi|229296009|gb|EEN66652.1| hypothetical protein BRAFLDRAFT_117885 [Branchiostoma floridae]
          Length = 1596

 Score =  170 bits (431), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 70/440 (15%), Positives = 145/440 (32%), Gaps = 60/440 (13%)

Query: 223  TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISY 282
                 +          EE+    + ++  + ++     D SG        + I++ +  +
Sbjct: 1087 MPGPKKVTRLGLEAKKEENLSDWYSQVITKSEMIEY-YDVSGCYILRPMSYSIWEKIKDF 1145

Query: 283  MRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
               +IK    + +  P  + Q   + +  H   +   +  V  + DT       A++P +
Sbjct: 1146 FDAEIKKMGVDNVYFPIFVSQSALEREKTHIADFAPEVAWVTKSGDTDL-AEPIAIRPTS 1204

Query: 341  CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQ 399
                   +   +KS+R+LP++  ++ +V R E        +R R F   + H  F +K++
Sbjct: 1205 ETVMYPAYAKWIKSHRDLPIKYNQWNNVVRWEFKHP-QPFLRTREFLWQEGHSAFASKDE 1263

Query: 400  MFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSS 459
               E + I  L   +Y+D     ++    T  EK  G D                     
Sbjct: 1264 ADEEVMAILELYARVYEDLMAIPVIRGRKTEKEKFAGGD--------------------- 1302

Query: 460  QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
                           Y    E  +  A GR  Q  T        S+          +   
Sbjct: 1303 ---------------YTTTVEVYI-SASGRAIQGATSHHLGQNFSKMFEIVYEDPEKPGE 1346

Query: 520  PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI----QAIVTT----------ITSSAV 565
               +++  +G   R IG+M+     N  L + P+    Q +V                 +
Sbjct: 1347 KKFVYQNSWGITTRTIGVMVMVHGDNKGLVVPPVVARDQVVVIPCGVTASLPEEDKQKLM 1406

Query: 566  EYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERS-IGIRR 623
            +  QE    L+   +    D R+  +  +K     +K  PI +  G ++  +   + +R 
Sbjct: 1407 KKCQEYRQALRDAGIRATDDLRDNYSPGWKFNHWELKGTPIRMEVGPRDMKQNQFVAVR- 1465

Query: 624  FGSTTTQKVSLLDAIPILTK 643
              +     ++   A   + +
Sbjct: 1466 RDTGEKMTLAEGKAAEKIKE 1485


>gi|323669590|ref|NP_001191177.1| bifunctional aminoacyl-tRNA synthetase [Danio rerio]
          Length = 1511

 Score =  170 bits (431), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 80/441 (18%), Positives = 150/441 (34%), Gaps = 63/441 (14%)

Query: 226  NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
              +Q         EE+    + ++  + ++     D SG        + I+  +  +  R
Sbjct: 1007 PKKQTRLGLEAKKEENLADWYSQVITKAEMIEY-YDVSGCYVLRPWSYSIWDAIKEFFDR 1065

Query: 286  KIKD-DYEEINTPQVLD-QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPG 343
            +IK    E    P  +    L ++  H   +   +  V  +  T       A++P +   
Sbjct: 1066 EIKKLGVENCYFPMFVSQAALEKEKTHIADFAPEVAWVTRSGKTEL-AEPIAVRPTSETV 1124

Query: 344  HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFN 402
                +   ++S+R+LP++L ++ +V R E        +R R F   + H  F TKE+   
Sbjct: 1125 MYPAYAKWVQSHRDLPIKLNQWCNVVRWEFK-HPQPFLRTREFLWQEGHTAFATKEEATE 1183

Query: 403  ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
            E L+I +L   +Y++     ++    T  EK  G D                        
Sbjct: 1184 EVLQILDLYARVYEELMAIPVVKGRKTEKEKFAGGD------------------------ 1219

Query: 463  INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
                        Y    E     A GR  Q  T        SR          +     +
Sbjct: 1220 ------------YTTTVE-AFISASGRAIQGATSHHLGQNFSRMFEIVFEDPKKPGEKQL 1266

Query: 523  IHRAVFGSIERFIGIMIENFKGNLPLWLSPI----QAIVTTIT----------SSAVEYA 568
             ++  +G   R IG++      N+ L L P     Q I+                 ++  
Sbjct: 1267 AYQNSWGITTRTIGVLTMVHGDNMGLVLPPRVACLQVIIIPCGITATLPEAEKDLLLDQC 1326

Query: 569  QEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERS-IGIRRFGS 626
             +  + L+   + ++ D R+  +  +K     +K +PI    G K+  +   + +R   +
Sbjct: 1327 SKYLSRLQKADIRVKADLRDNYSPGWKFNHWELKGVPIRFEVGPKDLKQGQFVAVR-RDT 1385

Query: 627  TTTQKVSLLDA---IPILTKE 644
                 V   DA   IP L +E
Sbjct: 1386 GEKITVKEADAEKKIPNLLEE 1406


>gi|322369853|ref|ZP_08044415.1| prolyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
 gi|320550189|gb|EFW91841.1| prolyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
          Length = 485

 Score =  170 bits (431), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 60/387 (15%), Positives = 125/387 (32%), Gaps = 55/387 (14%)

Query: 270 RKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDT 327
            +G+ +++ L  ++    K+   +    P ++ +   + +S   + +   +  V      
Sbjct: 45  PRGYALWEGLQDHLDGWFKETGAQNAYFPALIPESYLERESDIVEGFDPEVAWVTHGGHD 104

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
             D R  A +P +        +  ++S+R+LP+RL ++ SV R E +       R + F 
Sbjct: 105 ELDER-LAFRPTSESIITPFMSQWVRSHRDLPLRLNQWCSVIRWEATD-TKPFFRTKEFL 162

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENI 447
             + H     E+                                      D      E  
Sbjct: 163 WQEGHTAHETEEEAW-----------------------------------DETMTRLEQY 187

Query: 448 MKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRF 506
            +   + +                GA      E ++ D  G+  Q  T           +
Sbjct: 188 QRVFEEVLAIPVMPGRKPEHDKFPGADTTTTVEALMPD--GKSVQGATSHYLGQGFAEAY 245

Query: 507 NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNL----PLWLSPIQAIVTTI-- 560
           + ++ + + ++    + H   +G   R +G +I           P  L+P Q ++  I  
Sbjct: 246 DLYFTDENEDER---VAHTTSWGLSWRALGALIMTHSDEQGFVCPPTLAPEQVVIVPIWQ 302

Query: 561 ---TSSAVEYAQEIANLLKSHHLSIETDFRNET-INYKIREHSIKKIPIIIICGDKEASE 616
                  + YA+ IA  L+   + +E D R+E    +K  E  +K +P+    G  E  +
Sbjct: 303 EENREEVLSYAEGIAEDLEEAGVRVELDDRDERNPGFKFNEWELKGVPVRFEIGPHEVED 362

Query: 617 RSIGIRRFGSTTTQKVSLLDAIPILTK 643
             I +              D    +  
Sbjct: 363 DEITVVHRPDGENVVEDRADIAETVED 389


>gi|260587370|ref|ZP_05853283.1| proline--tRNA ligase [Blautia hansenii DSM 20583]
 gi|331083671|ref|ZP_08332782.1| prolyl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA]
 gi|260542237|gb|EEX22806.1| proline--tRNA ligase [Blautia hansenii DSM 20583]
 gi|330403882|gb|EGG83434.1| prolyl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA]
          Length = 479

 Score =  170 bits (431), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 74/430 (17%), Positives = 161/430 (37%), Gaps = 56/430 (13%)

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR 284
               ++L + +  +EE   + +  + ++ DL         ++     G+ I++ +   + 
Sbjct: 1   MANNKKLVEAITSMEEDFAQWYTDVVKKADLIDYTSVKGCMVI-KPAGYAIWENIQHELD 59

Query: 285 RKIKDDYEE-INTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
           R+ K+   E +  P  + + L  ++  H + +   +  V          R   ++P +  
Sbjct: 60  RRFKETGVENVYLPMFIPESLLQKEKDHVEGFAPEVAWVTHGGLEPLQER-LCVRPTSET 118

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA-HVFCTKEQMF 401
                +   ++S+R+LP    ++ SV R E   +    +R R F   +      T E+  
Sbjct: 119 LFCDFYAKEIQSHRDLPKVYNQWCSVVRWEK--TTRPFLRSREFLWQEGHTAHATAEEAE 176

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
              +++ N+     +      ++    T  EK  G+++ +                    
Sbjct: 177 ERTIQMLNIYADFCEQVLAMPVVKGKKTDKEKFAGAESTY-------------------- 216

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHP 520
                             E ++ D  G+  Q GT           F   Y +  ++  + 
Sbjct: 217 ----------------TIEALMHD--GKALQSGTSHNFGDGFAKAFGIQYTDKENKLQY- 257

Query: 521 VMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTI---TSSAVEYAQEIAN 573
             +H+  +G   R IG +I     N    LP  ++P+QA+V  I       ++ A ++  
Sbjct: 258 --VHQTSWGMTTRLIGAIIMVHGDNSGLVLPPRIAPVQAVVIPIQQKKEGVLDNAYKLQA 315

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            LK+  + ++TD  +++  +K  E  ++ IP+ I CG K+       + R  +     VS
Sbjct: 316 QLKAAGIRVKTDDTDKSPGFKFAEQEMRGIPVRIECGPKDMEANQAVVVRRDTREKITVS 375

Query: 634 LLDAIPILTK 643
           L +    + K
Sbjct: 376 LDNLAEEVQK 385


>gi|257867921|ref|ZP_05647574.1| prolyl-tRNA synthetase [Enterococcus casseliflavus EC30]
 gi|257874250|ref|ZP_05653903.1| prolyl-tRNA synthetase [Enterococcus casseliflavus EC10]
 gi|257802004|gb|EEV30907.1| prolyl-tRNA synthetase [Enterococcus casseliflavus EC30]
 gi|257808414|gb|EEV37236.1| prolyl-tRNA synthetase [Enterococcus casseliflavus EC10]
          Length = 477

 Score =  170 bits (431), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 64/428 (14%), Positives = 151/428 (35%), Gaps = 60/428 (14%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTL-ISYMRRKIKDDYEEINT 296
            +      + +  ++ +L   +     +  +   G+++++ +   + R   K+       
Sbjct: 3   QKNDFTEWYIQTIQKAELMAYSPVKGSI-IFRPDGFELWEHIQEEFNRFLKKEGIRNAYF 61

Query: 297 PQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P ++ Q+ + +++ H + +   +  V    +  K     AL+P +     + F+  + SY
Sbjct: 62  PMLIPQNFFMKEADHIEGFAPELPWVTEVGNE-KLEEPLALRPTSETMIGSAFSDWINSY 120

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF-NECLKIHNLIISI 414
           R+LP  + ++ +V+R E        +R   F   + H     E+      +K+ +    +
Sbjct: 121 RDLPYEINQWANVFRWEKK--TLPFLRTSEFLWQEGHTAHENEEDARQRTMKVLDEYARL 178

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            ++F    +     T  E+  G                                    A 
Sbjct: 179 CEEFLAIPVYRGQKTPSERFAG------------------------------------AV 202

Query: 475 YGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
                E ++KD  G+  Q GT           F+  Y+   ++       H   +G   R
Sbjct: 203 DTYSIEAMMKD--GKAVQAGTSHYMGTKFAEAFDITYLTKENK---HTYAHTTSWGVSTR 257

Query: 534 FIGIMIENFKGN----LPLWLSPIQAIVTTI-----TSSAVEYAQEIANLLKSHHLSIET 584
            +G +I           P  ++P Q ++  +       + +E  +E+    K+  + +  
Sbjct: 258 LLGALIMTHGDENGLVFPPTIAPTQVVLLPVGPWKKNPAILEKLEELYANFKAKGIRVRL 317

Query: 585 DFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           D  + +  YK  E  +K   + I CG ++     + ++       Q V+L +    + +E
Sbjct: 318 DDSDNSPGYKFNEWELKGACLRIECGPRDLEAGKVMVKVRDLPDKQTVALEELEAFVDQE 377

Query: 645 --SLPPDC 650
             ++ P  
Sbjct: 378 LQAMTPRL 385


>gi|288925105|ref|ZP_06419041.1| proline--tRNA ligase [Prevotella buccae D17]
 gi|288338295|gb|EFC76645.1| proline--tRNA ligase [Prevotella buccae D17]
          Length = 493

 Score =  170 bits (431), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 70/443 (15%), Positives = 156/443 (35%), Gaps = 72/443 (16%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
              ++  + +  L  + DL   +     +I     G+ I++ +   + +  K+   +   
Sbjct: 10  KRADNYSQWYNDLVVKADLAEQSPVRGCMII-KPYGFAIWEKMKEQLDKMFKETGAQNAY 68

Query: 296 TPQVLDQHLW-QQSGHWDSYRANMFAVKCA-------------DDTIKDLRTFALKPMNC 341
            P ++ +    +++ H   +      V                D   +      ++P + 
Sbjct: 69  FPLLIPKSFLSREAEHVKGFAKECAVVTHYRLKSSEDGCSVEVDPAARLDEELIIRPTSE 128

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
                 + + + S+R+LP+   ++ +V R E        +R   F   + H   T     
Sbjct: 129 TIIWNTYKNWIHSWRDLPIMCNQWCNVMRWEMR--TRPFLRTSEFLWQEGH---TAHATR 183

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E  +    ++ +Y  F                                  + +      
Sbjct: 184 EEAEEEAKKMLHVYAKF--------------------------------AEEWMAVPVVQ 211

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHP 520
            + +      GA      E +++D  G+  Q GT   +  N    F+  Y+N  ++   P
Sbjct: 212 GVKSETERFAGALDTYTIEAMMQD--GKALQSGTSHFLGQNFAKSFDVTYLNKDNK---P 266

Query: 521 VMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVEY------AQE 570
             +    +G   R +G +I    ++    LP  L+PIQ ++  IT    +        Q 
Sbjct: 267 EYVWATSWGVSTRLMGALIMVHSDDNGLVLPPKLAPIQVVIIPITKGNDQLQAINAKLQP 326

Query: 571 IANLLKSHHLSIETDF-RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           + + L+   +S++ D   N+   +K  ++ +K +P+ ++ G ++  + +I I R  +   
Sbjct: 327 VIDRLRDMGISVKYDDADNKRPGFKFADYELKGVPVRLVMGGRDLEDNTIEIMRRDTLEK 386

Query: 630 QKVSLLDAIPILTKESLPPDCQK 652
           + VS       +  E L  D QK
Sbjct: 387 ESVSFDGIAERV--EGLLEDIQK 407


>gi|255654137|ref|ZP_05399546.1| prolyl-tRNA synthetase [Clostridium difficile QCD-23m63]
          Length = 481

 Score =  170 bits (431), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 73/429 (17%), Positives = 164/429 (38%), Gaps = 57/429 (13%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
            +++  + +  +E+   + +  +  + DL   A     ++     G+ +++ +  +M +K
Sbjct: 4   NEKQFVEEITKMEDDFPQWYTDVITKTDLVDYAPVKGFMVV-KPYGYALWEKMQEFMDKK 62

Query: 287 IKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
            K+  ++    P ++ + L  +++ H + +   +  V    +   + R   ++P +    
Sbjct: 63  FKETGHKNCYFPLLIPESLLNKEAEHVEGFAPEVAWVTHGGNKKLEER-LCVRPTSETII 121

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNE 403
             ++   LKSYRELP    ++ SV R E S      +R   F   + H    T E+   E
Sbjct: 122 CTMYAKWLKSYRELPYLYNQWCSVVRWEKS--TRPFLRTSEFLWQEGHTLHETAEEAQEE 179

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            ++   +  ++ ++     ++    +  EK  G +  +                      
Sbjct: 180 TIQQLEVYKALCEELLAMPVVAGQKSESEKFAGGERTY---------------------- 217

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVM 522
                           E ++ D  G+  Q GT   +  +    F+  + +      +P  
Sbjct: 218 --------------TIEAMMHD--GKALQSGTSHFLGQHFTKAFDITFADREGNLANP-- 259

Query: 523 IHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSS---AVEYAQEIANLL 575
            +   +G+  R IG +I    +N    LP  ++PIQ ++  I +     +E   +I   L
Sbjct: 260 -YHTSWGASTRLIGGLIMTHSDNRGLVLPPRVAPIQVVIVPIAAKKGNVMETVDKIYADL 318

Query: 576 KSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           K+  +++E D R+  T  +K  E  +K +P+ I  G K+       + R  +     + L
Sbjct: 319 KAKGVAVEVDDRDNYTTGWKFNEWEMKGVPVRIEIGPKDIENNQAMVFRRDTLEKDSMPL 378

Query: 635 LDAIPILTK 643
                 +  
Sbjct: 379 EGLADAVCD 387


>gi|294673774|ref|YP_003574390.1| proline--tRNA ligase [Prevotella ruminicola 23]
 gi|294473292|gb|ADE82681.1| proline--tRNA ligase [Prevotella ruminicola 23]
          Length = 493

 Score =  170 bits (431), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 66/410 (16%), Positives = 145/410 (35%), Gaps = 71/410 (17%)

Query: 270 RKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCA--- 324
             G+ I++ +   + +  K+   +    P ++ +    +++ H + +      V      
Sbjct: 42  PYGYAIWEKMQQQLDKMFKETGAQNAYFPLLIPKSFLSKEAEHVEGFAKECAVVTHYRLR 101

Query: 325 ----------DDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
                     D T K      ++P +       + + + S+R+LP+   ++ +V R E  
Sbjct: 102 AKEDKSGVEVDPTAKLEEELIVRPTSETIIWNTYKNWIHSWRDLPLMCNQWCNVMRWEMR 161

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
                 +R   F   + H   T      E  +    ++ +Y  F                
Sbjct: 162 --TRPFLRTSEFLWQEGH---TAHATREEAEEEAQKMLKVYAKF---------------- 200

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
                             + +       + +      GA      E +++D  G+  Q G
Sbjct: 201 ----------------AEEWMAVPVVQGVKSETERFAGALDTYTIEAMMQD--GKALQSG 242

Query: 495 TIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLW 549
           T   +  N    F   Y+N  ++   P  +    +G   R IG +I    ++    LP  
Sbjct: 243 TSHFLGQNFAKAFEVTYLNKENK---PEYVWATSWGVSTRLIGALIMTHSDDNGLVLPPR 299

Query: 550 LSPIQAIVTTI--TSSAVEYAQE----IANLLKSHHLSIETDF-RNETINYKIREHSIKK 602
           L+PIQ ++  I      +E   +    I   L++  ++++ D   N+   +K  ++ +K 
Sbjct: 300 LAPIQVVIIPIATKPEQMEQVNKEVTPIIEALRAKGITVKFDDADNKRPGFKFADYELKG 359

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           +P+ ++ G ++    +I + R  +   +  S+      +  E L  D QK
Sbjct: 360 VPVRLVLGARDLENGTIEVMRRDTLEKETRSIDGITEYV--EQLLEDIQK 407


>gi|292655033|ref|YP_003534930.1| prolyl-tRNA synthetase [Haloferax volcanii DS2]
 gi|291371489|gb|ADE03716.1| prolyl-tRNA synthetase [Haloferax volcanii DS2]
          Length = 488

 Score =  170 bits (430), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 62/389 (15%), Positives = 140/389 (35%), Gaps = 57/389 (14%)

Query: 270 RKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDT 327
            +G+ +++++ +Y+  + K    +    P  + +   + +    + +   +  V      
Sbjct: 46  PRGYALWESIQNYLDGEFKKTGVQNAYFPLFIPESYLEREKDIVEGFDPEVAWVTHGGHE 105

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
             + R  A++P +           ++S+R+LP+R+ ++ SV R E +       R + F 
Sbjct: 106 ELEER-LAVRPTSESIIAPYMAQWVRSHRDLPLRVNQWASVVRWEAT-ETKPFFRTKEFL 163

Query: 388 QDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
             + H    T++  ++E +   +   S+Y+D                          A  
Sbjct: 164 WQEGHTAHETRDGAWDETMTRLSQYQSLYEDV------------------------LAIP 199

Query: 447 IMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV-DFNLPSR 505
           +++G                     GA      E ++ D  G+  Q GT      +    
Sbjct: 200 VLRGA------------KPEHDKFPGADTTTTVEALMPD--GKSVQAGTSHYLGTSFAEA 245

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL----SPIQAIVTTI- 560
           F+  Y     ++      H   +G   R +G +I     +  L L    +P Q ++  I 
Sbjct: 246 FDLTYTTEDEDEE---PAHTTSWGLSWRSLGALIMTHSDDQGLVLPPTIAPEQVVIVPIW 302

Query: 561 ----TSSAVEYAQEIANLLKSHHLSIETDFRNET-INYKIREHSIKKIPIIIICGDKEAS 615
                   ++YA++IA  L+   + +E D R+E    +K  E  +K +P+    G  E  
Sbjct: 303 QADTQEKVLDYAKDIAEDLEDAGVRVELDARDERNPGFKFNEWELKGVPVRFEIGPNEVD 362

Query: 616 ERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  +         + ++   +    +  +
Sbjct: 363 DDVVTAVHRPDGDSVELDRENIAEAVQAQ 391


>gi|257876814|ref|ZP_05656467.1| prolyl-tRNA synthetase [Enterococcus casseliflavus EC20]
 gi|257810980|gb|EEV39800.1| prolyl-tRNA synthetase [Enterococcus casseliflavus EC20]
          Length = 477

 Score =  170 bits (430), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 65/428 (15%), Positives = 152/428 (35%), Gaps = 60/428 (14%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTL-ISYMRRKIKDDYEEINT 296
            +      + +  ++ +L   +     +  +   G+++++ +   + R   K+       
Sbjct: 3   QKNDFTEWYIQTIQKAELMAYSPVKGSI-IFRPDGFELWEHIQEEFNRFLKKEGIRNAYF 61

Query: 297 PQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P ++ Q+ + +++ H + +   +  V    +  K     AL+P +     + F+  + SY
Sbjct: 62  PMLIPQNFFMKEADHIEGFAPELPWVTEVGNE-KLEEPLALRPTSETMIGSAFSDWINSY 120

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF-NECLKIHNLIISI 414
           R+LP  + ++ +V+R E        +R   F   + H     E+      +K+ +    +
Sbjct: 121 RDLPYEINQWANVFRWEKK--TLPFLRTSEFLWQEGHTAHENEEDARQRTMKVLDEYARL 178

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            ++F    +     T  E+  G                                    A 
Sbjct: 179 CEEFLAIPVYRGQKTPSERFAG------------------------------------AV 202

Query: 475 YGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
                E ++KD  G+  Q GT           F+  Y+   ++  H    H   +G   R
Sbjct: 203 DTYSIEAMMKD--GKAVQAGTSHYMGTKFAEAFDITYLTKENKHTHA---HTTSWGVSTR 257

Query: 534 FIGIMIENFKGN----LPLWLSPIQAIVTTI-----TSSAVEYAQEIANLLKSHHLSIET 584
            +G +I           P  ++P Q ++  +       + +E  +E+    K+  + +  
Sbjct: 258 LLGALIMTHGDENGLVFPPTIAPTQVVLLPVGPWKKNPAILEKLEELYANFKAKGIRVRL 317

Query: 585 DFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           D  + +  YK  E  +K   + I CG ++     + ++       Q V+L +    + +E
Sbjct: 318 DDSDNSPGYKFNEWELKGACLRIECGPRDLEAGKVMVKVRDLADKQTVALEELEAFVDQE 377

Query: 645 --SLPPDC 650
             ++ P  
Sbjct: 378 LQAMTPRL 385


>gi|291542076|emb|CBL15186.1| prolyl-tRNA synthetase [Ruminococcus bromii L2-63]
          Length = 479

 Score =  170 bits (430), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 68/430 (15%), Positives = 156/430 (36%), Gaps = 57/430 (13%)

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR 284
               +++ + +   +E   + +  + ++ +L   +     ++     G+ I++ + + + 
Sbjct: 1   MANNKKMVEAITSRDEDFAKWYTDIVKKAELVDYSGVKGCMVI-RPYGYAIWENIQADLD 59

Query: 285 RKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
           R+ K+  +E +  P  + + L  ++  H + +      V          R   ++P +  
Sbjct: 60  RRFKETGHENVYMPMFIPESLLQKEKDHVEGFAPECAWVTVGGQEKLQER-LCVRPTSET 118

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN 402
                +   + +YR+LP    ++ SV R E   +    +R   F   + H     E+   
Sbjct: 119 LFCEHYKKIINTYRDLPKLYNQWCSVVRWEK--TTRPFLRTSEFLWQEGHTMHETEEEAR 176

Query: 403 EC-LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
           E  L++ ++    YK+      ++   T  EK  G++  +                    
Sbjct: 177 EETLRMLHVYSDFYKETLAIPAVIGRKTEKEKFAGAEETY-------------------- 216

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHP 520
                             E ++ +  G   Q GT           F   Y    ++  +P
Sbjct: 217 ----------------TIEPMMHN--GVALQGGTSHYFGDGFAKSFGITYTGKDNKLHYP 258

Query: 521 VMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIAN 573
              H+  +G   R IG +I    ++    LP  +SPIQ  +  +       +E A+E+  
Sbjct: 259 ---HQTSWGVSTRMIGALIMVHSDDDGLVLPPKISPIQVALIPVAQHKEGVLEKAEELRK 315

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            L      ++ D  +    +K  E+ +K +P+ +  G K+  +    + R  +     VS
Sbjct: 316 ALAEK-FRVKLDSSDHAPGWKFAEYEMKGVPVRVEIGPKDIEKNQCVVVRRDTREKAFVS 374

Query: 634 LLDAIPILTK 643
           + + +P +  
Sbjct: 375 IDELVPFVEN 384


>gi|307717742|ref|YP_003873274.1| prolyl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
 gi|306531467|gb|ADN01001.1| prolyl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
          Length = 477

 Score =  170 bits (430), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 64/391 (16%), Positives = 145/391 (37%), Gaps = 59/391 (15%)

Query: 270 RKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDT 327
            +G+ I++ + S + R  K+  ++    P ++ +    +++ H + +   +  V      
Sbjct: 39  PRGYAIWEKIQSQLDRMFKETGHQNAYFPLLIPESFLHKEAEHVEGFSPELAVVTHGGGE 98

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
             +     ++P +     +++   ++SYR+LP+ + ++ +V R E        +R   F 
Sbjct: 99  ALE-EPLVVRPTSETIIWSMYKKWIQSYRDLPLLINQWANVVRWEKR--TRLFLRTTEFL 155

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENI 447
             + H   T      E  +    ++ +Y++F                             
Sbjct: 156 WQEGH---TAHATREEAEEEALRMLHVYREF----------------------------- 183

Query: 448 MKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRF 506
                + +         T      GA      E +++D   +  Q GT   +  N    F
Sbjct: 184 ---AEEYLALPVFYGRKTESEKFAGAVTTYSIEAMMQD--KKALQAGTSHFLGQNFAKAF 238

Query: 507 NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTIT- 561
           +  +        +   +    +G   R IG +I    ++    LP  ++P QA++  I  
Sbjct: 239 DVTFQTQAGTLDY---VWATSWGVSTRLIGAVIMAHSDDRGLVLPPRIAPTQAVIIPIYT 295

Query: 562 ----SSAVEYAQEIANLLKSHHLSIETDFRN-ETINYKIREHSIKKIPIIIICGDKEASE 616
                   +YA+ +   L    LS+E D  +  +  +K  E  ++ +PI +  G ++  +
Sbjct: 296 KKTVDQVADYAKRVFGRLAEAGLSVEMDLDDQNSPGWKFAEWELRGVPIRVEVGPRDMEQ 355

Query: 617 RSIGIRRFGSTTTQKVSLL---DAIPILTKE 644
               + R  +   + VS+    + IP+L +E
Sbjct: 356 EKAVLVRRDTGEKRAVSVSRLPEEIPVLLEE 386


>gi|238922935|ref|YP_002936448.1| prolyl-tRNA synthetase [Eubacterium rectale ATCC 33656]
 gi|259511596|sp|C4ZC24|SYP_EUBR3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|238874607|gb|ACR74314.1| prolyl-tRNA synthetase [Eubacterium rectale ATCC 33656]
 gi|291523823|emb|CBK89410.1| prolyl-tRNA synthetase, family I [Eubacterium rectale DSM 17629]
 gi|291528709|emb|CBK94295.1| prolyl-tRNA synthetase, family I [Eubacterium rectale M104/1]
          Length = 479

 Score =  170 bits (430), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 75/439 (17%), Positives = 163/439 (37%), Gaps = 59/439 (13%)

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR 284
              +++L + +  +EE   + +  + ++ +L   +    G + +   G+ I++ +   + 
Sbjct: 1   MAKEKKLVEAITSMEEDFTQWYTDVVKKAELMDYSSVK-GCMIFKPNGYAIWENIQKNLD 59

Query: 285 RKIKDDYEE-INTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
              K+   E +  P  + + L  ++  H + +   +  V          R  A++P +  
Sbjct: 60  AMFKETGVENVYMPMFIPESLLQKEKDHVEGFAPEVAWVTQGGLETLQER-LAVRPTSET 118

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMF 401
               +F+  ++S+R+LP    ++ SV R E   +    +R   F   + H    T E+  
Sbjct: 119 LFCELFSKTVQSHRDLPKVYNQWCSVVRWEK--TTRPFLRSSEFLWQEGHTVHATAEEAE 176

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
              +++ N+     + +    ++    T  EK  G++A +                    
Sbjct: 177 ARTVQMLNIYADFCEKYLAIPMVKGRKTDKEKFAGAEATY-------------------- 216

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHP 520
                             E ++ D  G+  Q GT        P  F   Y +  ++  + 
Sbjct: 217 ----------------TIEALMHD--GKALQSGTSHNFGDGFPKAFGIQYTDKDNKLQY- 257

Query: 521 VMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIAN 573
              H   +G   R IG +I    ++    LP  ++P Q +V  I       ++ A ++ +
Sbjct: 258 --CHETSWGVSTRLIGAIIMVHGDDSGLVLPPKIAPTQVMVIPIQQQKDGVLDKAYDLKD 315

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            L S    ++ D  ++T  +K     ++ I   I  G K+  +    I R  +     VS
Sbjct: 316 KL-SKDFRVKIDATDKTPGWKFAAQEVQGISTRIEIGPKDIEKNQCVIVRRDTREKIVVS 374

Query: 634 LLDAIPILTK--ESLPPDC 650
           L +    L +  E++  D 
Sbjct: 375 LDEVNEKLAEVLETMQNDM 393


>gi|261402296|ref|YP_003246520.1| prolyl-tRNA synthetase [Methanocaldococcus vulcanius M7]
 gi|261369289|gb|ACX72038.1| prolyl-tRNA synthetase [Methanocaldococcus vulcanius M7]
          Length = 464

 Score =  170 bits (430), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 75/415 (18%), Positives = 151/415 (36%), Gaps = 62/415 (14%)

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
              +  +  +  ++ +     G   +   G+KI +     +R+ + +  ++E   P ++ 
Sbjct: 13  SEWYSDILEKAGIYDVRYPIKGCGVYLPYGFKIRRYAFELIRKLLDETGHDETLFPMLIP 72

Query: 302 QHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           + L  +++ H   +   ++ V     T  D++  AL+P +      +    +K + +LP+
Sbjct: 73  EDLLAKEAEHIKGFEDEVYWVTHGGKTPLDVK-LALRPTSETPIYYMMRLWVKVHTDLPI 131

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRG-FTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDF 418
           ++ +  + +R E       L+R+R   T  +AH    TKE+   +  +  ++    +   
Sbjct: 132 KVYQIVNTFRYETK-HTRPLIRLREIMTFKEAHTAHSTKEEAEKQVEEAISIYKKFFDVL 190

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           G   ++ K              WD                             GA Y   
Sbjct: 191 GIPHLVSKRPE-----------WDKF--------------------------PGAEYTMA 213

Query: 479 FEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           F+ I  D  GR  Q  T+  +  N    F   +     +K      ++  +G  +R I  
Sbjct: 214 FDTIFPD--GRVMQIATVHNLGQNFSKTFEIIFETPTGDKD---FAYQTCYGISDRVIAS 268

Query: 538 MIENFKGN----LPLWLSPIQAIVTTI-----TSSAVEYAQEIANLLKSHHLSIETDFRN 588
           +I          LP  ++P+Q ++  +         +E ++EI   LK     +  D R+
Sbjct: 269 IIAIHGDEKGLILPPVVAPLQIVIVPLIFKGKKEIVMEKSKEIYERLKDK-YRVYIDDRD 327

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS---LLDAIPI 640
                K  +  IK +P+ I  G K+     I I R  +    +V    L D I  
Sbjct: 328 IRPGKKFYDWEIKGVPLRIEVGPKDIESGKITIFRRDTMEKFQVEDEQLEDEIEK 382


>gi|32307624|gb|AAP79217.1| threonyl-tRNA synthetase [Bigelowiella natans]
          Length = 147

 Score =  170 bits (430), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 44/137 (32%), Positives = 74/137 (54%)

Query: 507 NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVE 566
           +  YV+   +K  P+M+HRA+FGSIERF GI++EN  G+ P+WLSP+Q  V  +T     
Sbjct: 1   DLEYVSKDGKKERPIMVHRAIFGSIERFFGILVENTAGDFPVWLSPVQLKVLPVTDDFRP 60

Query: 567 YAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS 626
           + +++    K+  +  E D  ++ +   IR   ++KIP++ + G KE     + IR    
Sbjct: 61  FCEDVVKKAKALGIRAEIDSSDDRLGKMIRNAELEKIPVVAVVGQKEIDSNQLAIRTRKG 120

Query: 627 TTTQKVSLLDAIPILTK 643
                 ++ D I  L+ 
Sbjct: 121 GDLGSFAVEDLIEKLSD 137


>gi|289064339|gb|ADC80545.1| proline aminoacyl-tRNA synthetase [Toxoplasma gondii]
          Length = 783

 Score =  170 bits (430), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 69/402 (17%), Positives = 143/402 (35%), Gaps = 60/402 (14%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHL-----WQQSGHWDSY 314
            D SG        + I++ +  +   +IK    E +   +           ++  H + +
Sbjct: 358 YDISGCYIMRPWAFHIWEKVQRFFDDEIKKMGVENSYFPMFVSRHAQHKLEKEKDHVEGF 417

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
              +  V    D+    +  A++P +       +   ++S+R+LP++L ++ SV R E  
Sbjct: 418 SPEVAWVTHYGDSPLPEK-IAIRPTSETIMYPAYAKWIRSHRDLPLKLNQWCSVVRWEFK 476

Query: 375 GSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
                 +R R F   + H    T+E+ +   L I  L    Y++     ++    +  EK
Sbjct: 477 QPT-PFLRTREFLWQEGHTAHATEEEAWELVLDILELYRRWYEECLAVPVIKGEKSEGEK 535

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
             G                                           E  + +  GR  Q 
Sbjct: 536 FAGGKK------------------------------------TTTVEAFIPE-NGRGIQA 558

Query: 494 GTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
            T   +  N    F   + +    K    ++H+  +G   R +G+MI     +  L + P
Sbjct: 559 ATSHLLGTNFAKMFEIEFEDEEGHKR---LVHQTSWGCTTRSLGVMIMTHGDDKGLVIPP 615

Query: 553 ----IQAIVTTI------TSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIREHSIK 601
               +Q ++  I      T   +   +E+  +L+   + +  D R N T  +K     +K
Sbjct: 616 RVASVQVVIIPILFKDENTGEILGKCRELKTMLEKADIRVRIDDRSNYTPGWKYNHWEVK 675

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +P+ +  G K+ ++ +  + R  +    ++S  D  P L +
Sbjct: 676 GVPLRLELGPKDLAKGTARVVRRDTGEAYQISWADLAPKLLE 717


>gi|325103166|ref|YP_004272820.1| prolyl-tRNA synthetase [Pedobacter saltans DSM 12145]
 gi|324972014|gb|ADY50998.1| prolyl-tRNA synthetase [Pedobacter saltans DSM 12145]
          Length = 490

 Score =  170 bits (430), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 81/437 (18%), Positives = 168/437 (38%), Gaps = 74/437 (16%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
             E   + + +L  + DL        G +     G+ I++ + S + +K K+  +     
Sbjct: 8   RAEDYSQWYNELVAKADLAE-HSAVRGCMVIKPYGYSIWEKMQSVLDQKFKETGHSNAYF 66

Query: 297 PQVLDQHLW-QQSGHWDSYRANMFAVKCA------------DDTIKDLRTFALKPMNCPG 343
           P  + +  + +++ H D +      V               D+  K      ++P +   
Sbjct: 67  PLFIPKSFFSKEASHVDGFATECAVVTHYRLKNDGTGNIIVDEEAKLEEELIVRPTSETI 126

Query: 344 HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFN 402
               +   ++SYR+LP+ + ++ +V R E        +R   F   + H    T+E+   
Sbjct: 127 IWNTYKGWIQSYRDLPILVNQWANVVRWEMR--TRLFLRTAEFLWQEGHTAHATREEAVE 184

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
           E  K+      +Y DF                         AEN +   +   K ++ +R
Sbjct: 185 ETEKML----EVYADF-------------------------AENWLALPVVRGKKTANER 215

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPV 521
                    GA      E +++D  G+  Q GT   +  N    F+  + +   ++    
Sbjct: 216 F-------AGALDTYCIEALMQD--GKALQAGTSHFLGQNFAKAFDVKFTSKEGKQE--- 263

Query: 522 MIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVEYAQ------EI 571
            +    +G   R +G +I    ++    LP  L+PIQ ++  I     E A+      +I
Sbjct: 264 FVWATSWGVSTRLMGALIMAHSDDAGLVLPPKLAPIQVVIVPINKGEEELARITVVADDI 323

Query: 572 ANLLKSHHLSIETDFRN-ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
              LK+  +S++ D R+ +   +K  E+ +K +P+ +  G ++    +I + R  + T +
Sbjct: 324 IAQLKAKGISVKYDDRDTQRPGFKFAEYEMKGVPVRLAIGGRDLDNNTIEVARRDTRTKE 383

Query: 631 KVS---LLDAIPILTKE 644
            +S   + D +  L +E
Sbjct: 384 TMSRDNIADVVESLLEE 400


>gi|39969493|ref|XP_366137.1| hypothetical protein MGG_10357 [Magnaporthe oryzae 70-15]
 gi|145015163|gb|EDJ99731.1| hypothetical protein MGG_10357 [Magnaporthe oryzae 70-15]
          Length = 566

 Score =  170 bits (430), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 72/417 (17%), Positives = 151/417 (36%), Gaps = 57/417 (13%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
           EE+  + ++++  + ++     + SG          ++  +  + + KI     EE + P
Sbjct: 68  EENFPQWYQEVVLKAEMIEYYTEISGFYILRPAAMFVWSQIRKWFQEKIDVMGVEEASFP 127

Query: 298 QVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
             L     + +  H + +   +  V  A D   ++   A++P +       ++  ++S+R
Sbjct: 128 MFLSSKSLEKEKDHVEGFAPELAWVTKAGDKDLEV-PVAVRPTSEAVMYPYYSKWIRSHR 186

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIY 415
           +LP+RL ++ SV R E        +R R F   + H    T+E    E L+I      +Y
Sbjct: 187 DLPLRLNQWNSVVRWEAK-QTTPFLRAREFLWQEGHTAHLTEEDAGKEVLEILEHYAGVY 245

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           +      ++    T  EK  G                                     +Y
Sbjct: 246 EQLLAVPVVRGKKTENEKFAGG------------------------------------YY 269

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
               E  +  + GR  Q  T        S+     V    ++   + + +  +G   R I
Sbjct: 270 TTTVEGYIP-SNGRGIQGATSHCLGQNFSKMFDITVEDPKKEKGHLHVWQNSWGLSTRVI 328

Query: 536 GIMIENFKGNLPLWLSP----IQAIVTTIT----------SSAVEYAQEIANLLKSHHLS 581
           G+M+     +  L   P     QA++  +           ++      E+   LK   + 
Sbjct: 329 GVMVMIHGDDKGLVFPPRIARTQAVLIPVGITAKTTPEERTAHTAKLDELNKTLKDAGVR 388

Query: 582 IETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
           +E+D R+  T  +K     +K +P+ +  G K+A++  +   R  +     +++ D 
Sbjct: 389 VESDMRDGYTPAWKFNHWELKGVPLRLEFGPKDAAKDQVAFARRDTGEKGSIAIADL 445


>gi|310829146|ref|YP_003961503.1| hypothetical protein ELI_3581 [Eubacterium limosum KIST612]
 gi|308740880|gb|ADO38540.1| hypothetical protein ELI_3581 [Eubacterium limosum KIST612]
          Length = 483

 Score =  170 bits (430), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 68/429 (15%), Positives = 162/429 (37%), Gaps = 58/429 (13%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
            Q    + +  +E    + +  +  + +L   +     ++     G+ I++ +      +
Sbjct: 4   KQNNQVKEITPMEVDFPQWYTDVISKTELVDYSPVKGFMVI-RPYGYAIWENIQKAYDER 62

Query: 287 IKD-DYEEINTPQVLDQHL-WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
            K   ++ +  P ++ + L  +++ H + +   +  V    D         ++P +    
Sbjct: 63  FKATGHQNMYFPLLIPESLLKKEAEHVEGFAPEVAWVTKGGDKEL-AEPLCVRPTSETII 121

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNE 403
            +++   L SYR+LP    ++ SV R E   +    +R   F   + H    T E+   E
Sbjct: 122 CSMYAKWLHSYRQLPFLYNQWCSVVRWEK--TTRPFLRTSEFLWQEGHTLHETPEEAQEE 179

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            +++ N+   + +D     ++V   +  EK  G+ A +                      
Sbjct: 180 TMQMLNIYREVAEDIMAIPVVVGQKSEKEKFAGAAATY---------------------- 217

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVM 522
                           E ++ D  G+  Q GT   +  +    F+  Y++ ++E+ +P  
Sbjct: 218 --------------TMEALMHD--GQALQSGTSHNLGQHFTKAFDITYLDRNNEQAYP-- 259

Query: 523 IHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIANLL 575
            +   +G   R IG +I    ++    LP  ++P Q ++  +       ++ A E+ ++L
Sbjct: 260 -YHTSWGVSTRLIGGIIMVHGDDNGLVLPPRIAPTQLVIIPVAQHKEGVLDKAYELKDIL 318

Query: 576 KSHHLSIETDFRN-ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
                 +E D  +  +  +K  +  +K +PI +  G ++       + R  +    +V+L
Sbjct: 319 -GAEFRVELDDNDSNSPGWKFNQWEMKGVPIRLEIGPRDIENGQCVLARRDTGEKVQVAL 377

Query: 635 LDAIPILTK 643
            D    +  
Sbjct: 378 DDITEAVRN 386


>gi|218288750|ref|ZP_03493013.1| prolyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1]
 gi|218241108|gb|EED08284.1| prolyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1]
          Length = 483

 Score =  170 bits (430), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 74/429 (17%), Positives = 160/429 (37%), Gaps = 61/429 (14%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
             E   R H  + ++ +    A     ++      ++I++     + R+ K   +     
Sbjct: 15  QSEDFSRWHIDVLQKAEWMDYAPVRGCIVI-RPDAYEIWERCQRELDREFKRTGHRNAYF 73

Query: 297 PQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P  + +  ++ +  H + +   +  V  A   I + R  A++P +      ++   ++SY
Sbjct: 74  PLFIPESFFEKEKEHVEGFNPELPWVTEAGGDILEER-LAVRPTSETMFGHMYAQWIQSY 132

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISI 414
           R+LP+ L ++ +V R E        +R   F   + H    T+E+   E +++  +    
Sbjct: 133 RDLPLLLNQWANVVRWEKR--TLPFLRTSEFLWQEGHTAHATEEEAREETMRMLGIYADF 190

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            + F    ++    T  EK  G                                    A 
Sbjct: 191 VESFLAIPVIRGQKTPSEKFAG------------------------------------AV 214

Query: 475 YGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
                E ++KD  GR  Q  T      N    F   Y++  ++  +   ++   +G   R
Sbjct: 215 DTYTIESLMKD--GRALQTATSHYLGQNFAKSFEIQYLDKDNQLKY---VYTTSWGMSTR 269

Query: 534 FIGIMI----ENFKGNLPLWLSPIQAIVTTIT-----SSAVEYAQEIANLLKSHHLSIET 584
            +G ++    ++    LP  L+P Q +V  I       + V  A+++A  L+   + +  
Sbjct: 270 ILGAIVMVHGDDRGLVLPPKLAPTQVVVVPIGPAKAREAVVAKARDLAEALRRADIRVHL 329

Query: 585 DFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           D R++ +  +K  E+ ++ +PI +  G ++       + R  +     V L   I  +  
Sbjct: 330 DDRDDVSPGWKFNEYELRGVPIRLELGPRDLEASQAVLARRDTGEKITVPLDGVIERV-- 387

Query: 644 ESLPPDCQK 652
           ++L  D Q+
Sbjct: 388 QALLSDIQR 396


>gi|76801546|ref|YP_326554.1| prolyl-tRNA synthetase [Natronomonas pharaonis DSM 2160]
 gi|114152219|sp|Q3IS99|SYP_NATPD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|76557411|emb|CAI48989.1| proline--tRNA ligase [Natronomonas pharaonis DSM 2160]
          Length = 482

 Score =  169 bits (429), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 67/390 (17%), Positives = 130/390 (33%), Gaps = 57/390 (14%)

Query: 270 RKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDT 327
            +G+ +++ L  ++    K+   +    P  + +   + +    D +   +  V      
Sbjct: 43  PRGYALWERLQDHLDGWFKETGVQNTYFPMFIPESYLEREKDIVDGFDPEVAWVTHGGHD 102

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
             + R  A++P +           ++SYR+LP+R+ ++ SV R E +       R + F 
Sbjct: 103 ELEER-LAVRPTSESIITPFIAEWVRSYRDLPLRVNQWCSVVRWEAT-ETKPFFRTKEFL 160

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENI 447
             + H     E+                                      D      E  
Sbjct: 161 WQEGHTAHATEESAW-----------------------------------DETMTRLEQY 185

Query: 448 MKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRF 506
            +   + +                GA      E ++ D  G+  Q GT      +    F
Sbjct: 186 ERLYEEVMAIPGMTGRKPEHDKFPGADTTTTIEALMPD--GKSVQAGTSHYLGTSFAEAF 243

Query: 507 NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNL----PLWLSPIQAIVTTI-- 560
           +  Y +    K      H   +G   R +G +I     +     P  L+P Q +V  I  
Sbjct: 244 DIEYTDEDETKQTA---HTTSWGLSWRALGALIMTHSDDQGLVIPPALAPTQVVVVPIWQ 300

Query: 561 ---TSSAVEYAQEIANLLKSHHLSIETDFRNET-INYKIREHSIKKIPIIIICGDKEASE 616
                +  EYA ++A  L      +E D R+E    +K  EH ++ +P+ I  G  E  +
Sbjct: 301 ADTEEAVKEYAADLAAELDEQ-FRVELDDRDERNPGFKFNEHELQGVPLRIEIGPNEVED 359

Query: 617 RSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
            +  +       +  V+  ++I     E+L
Sbjct: 360 EAATLVHRPDGES-DVAERESITDAVDEAL 388


>gi|297619256|ref|YP_003707361.1| prolyl-tRNA synthetase [Methanococcus voltae A3]
 gi|297378233|gb|ADI36388.1| prolyl-tRNA synthetase [Methanococcus voltae A3]
          Length = 481

 Score =  169 bits (429), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 74/418 (17%), Positives = 153/418 (36%), Gaps = 59/418 (14%)

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQVLD 301
              + ++     ++ +     G   +   G+KI +     +R  +    ++E   P ++ 
Sbjct: 26  SEWYNEILETAKIYDLRYPIKGCGVYLPYGFKIRRYSFEILRDLLDSTKHDETLFPMLIP 85

Query: 302 QHLWQQSG-HWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           + L  + G H   +   +F V        D+R  AL+P +      +    LK + +LP 
Sbjct: 86  ETLLAKEGEHIKGFEDEVFWVTHGGKNELDVR-LALRPTSETAIYYMMKQWLKVHTDLPF 144

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRG-FTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDF 418
           ++ +  + +R E       L+R+R   T ++AH    TKE+   +  +   +  S ++  
Sbjct: 145 KIYQTVNTFRYETK-HTRPLIRLREIMTFNEAHTAHSTKEECEAQVKEGMYVYSSFFEAL 203

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
               ++ K              WD                             GA Y   
Sbjct: 204 SIPVLISKRPE-----------WDKF--------------------------PGAEYTTA 226

Query: 479 FEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           ++ I  D  G+  Q GT+  +  +  + F+  +  +  EK +    ++  +G  +R I  
Sbjct: 227 YDTIYPD--GKTMQIGTVHNLGQHFATTFDLEFETADGEKDYA---YQTCYGISDRVIAS 281

Query: 538 MIENFKGN----LPLWLSPIQAIVTTI-----TSSAVEYAQEIANLLKSHHLSIETDFRN 588
           +I          +P  ++P+Q  +  +         +E A EI + LK   + IE D R+
Sbjct: 282 IIAIHGDKNGLLIPPKVAPVQIAMIPLLFKGKEEKVLEKANEIYDKLKKF-VRIELDTRD 340

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
                K  +  +K +P+ I  G ++     + I R        +++ D       E +
Sbjct: 341 IRPGRKFNDWELKGVPLRIELGPRDLENGKVMIFRRDKNEKFDIAIEDLTAEYLAELM 398


>gi|220927802|ref|YP_002504711.1| prolyl-tRNA synthetase [Clostridium cellulolyticum H10]
 gi|259511589|sp|B8I5R4|SYP_CLOCE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|219998130|gb|ACL74731.1| prolyl-tRNA synthetase [Clostridium cellulolyticum H10]
          Length = 478

 Score =  169 bits (429), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 71/439 (16%), Positives = 168/439 (38%), Gaps = 59/439 (13%)

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR 284
               ++L + +  + +   + +  + ++ +L   +     ++     G+ I++ +   + 
Sbjct: 1   MAKDKKLVEEITSMNDDFGQWYTDVIKKAELVDYSSVRGCMVI-KPYGYAIWENIQKSLD 59

Query: 285 RKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
            + K+  +E +  P  + + L  ++  H + +   +  V    D     R   ++P +  
Sbjct: 60  TRFKETGHENVYMPMFIPESLLLKEKEHVEGFAPEVAWVTHGGDEKLTER-LCVRPTSET 118

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMF 401
                +++ ++SYR+LP    ++ SV R E   +    +R   F   + H    T E+  
Sbjct: 119 LFCEHYSNSIQSYRDLPKLYNQWCSVVRWEK--TTRPFLRTLEFLWQEGHTAHATAEEAQ 176

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E +++ N+   + ++     ++    T  EK  G+ A +                    
Sbjct: 177 EETIRMLNVYADVLENVLAIPVIKGRKTEKEKFAGAHATY-------------------- 216

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHP 520
                             E ++ D  G+  Q GT           F+  Y + +++  + 
Sbjct: 217 ----------------TVESLMHD--GKALQSGTSHNFGDGFAKAFDIQYTDKNNQLQY- 257

Query: 521 VMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTIT---SSAVEYAQEIAN 573
             +H+  +G   R IG +I    ++    LP  ++P Q ++  ++      +E A E+  
Sbjct: 258 --VHQTSWGVTTRLIGAIIMVHGDDSGLVLPPAIAPTQLVIIPVSQHKEGVLEKANELKQ 315

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            L +    ++ D  ++   +K  E+ +K +P+ I  G K+  +    + R  +     VS
Sbjct: 316 KLSAK-FRVKMDDSDKMPGWKFSEYEMKGVPLRIEIGPKDIEKNQAVLVRRDNREKIFVS 374

Query: 634 LLDAIPILTKESLPPDCQK 652
           L +    +   +   D QK
Sbjct: 375 LDNLEETVV--NTLADVQK 391


>gi|157878081|pdb|1H4T|A Chain A, Prolyl-Trna Synthetase From Thermus Thermophilus Complexed
           With L-Proline
 gi|157878082|pdb|1H4T|B Chain B, Prolyl-Trna Synthetase From Thermus Thermophilus Complexed
           With L-Proline
 gi|157878083|pdb|1H4T|C Chain C, Prolyl-Trna Synthetase From Thermus Thermophilus Complexed
           With L-Proline
 gi|157878084|pdb|1H4T|D Chain D, Prolyl-Trna Synthetase From Thermus Thermophilus Complexed
           With L-Proline
          Length = 466

 Score =  169 bits (429), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 72/405 (17%), Positives = 139/405 (34%), Gaps = 65/405 (16%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
             +     + ++ ++ +L         ++     G+ I++ +   + R  K+  ++    
Sbjct: 6   QSQDFSEWYLEVIQKAELADYGPVRGTIVV-RPYGYAIWENIQQVLDRMFKETGHQNAYF 64

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P  +             +   +  V  A     +    A++P +      +++  ++S+R
Sbjct: 65  PLFIPMSFL--------FSPELAVVTHAGGEELE-EPLAVRPTSETVIGYMWSKWIRSWR 115

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +LP  L ++G+V R E        +R   F   + H   T      E  +    ++SIY 
Sbjct: 116 DLPQLLNQWGNVVRWEMR--TRPFLRTSEFLWQEGH---TAHATREEAEEEVRRMLSIYA 170

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
                                               +       + + T      GA Y 
Sbjct: 171 RL--------------------------------AREYAAIPVIEGLKTEKEKFAGAVYT 198

Query: 477 PKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
              E ++KD  G+  Q GT      N    F+  + +   +  +   +H   +G   RFI
Sbjct: 199 TTIEALMKD--GKALQAGTSHYLGENFARAFDIKFQDRDLQVKY---VHTTSWGLSWRFI 253

Query: 536 GIMIENFKGN----LPLWLSPIQAIVTTITSS-----AVEYAQEIANLLKSHHLSIETDF 586
           G +I     +    LP  L+PIQ ++  I         +E AQ +   L +  L +  D 
Sbjct: 254 GAIIMTHGDDRGLVLPPRLAPIQVVIVPIYKDESRERVLEAAQGLRQALLAQGLRVHLDD 313

Query: 587 RN-ETINYKIREHSIKKIPIIIICGDKEASERS-IGIRRFGSTTT 629
           R+  T  YK  E  +K +P  +  G K+      +   R G   T
Sbjct: 314 RDQHTPGYKFHEWELKGVPFRVELGPKDLEGGQAVLASRLGGKET 358


>gi|50365293|ref|YP_053718.1| prolyl-tRNA synthetase [Mesoplasma florum L1]
 gi|81827288|sp|Q6F0Y9|SYP_MESFL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|50363849|gb|AAT75834.1| prolyl-tRNA synthetase [Mesoplasma florum L1]
          Length = 473

 Score =  169 bits (429), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 75/392 (19%), Positives = 158/392 (40%), Gaps = 54/392 (13%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAV 321
           G I +   G+ I++ +  Y+  K K+ + + +  P ++ Q L+ ++  H + +   +  V
Sbjct: 35  GTIIFRPYGYAIWELIQKYLDAKFKELEVQNVYFPLLIPQSLFQKEKDHIEGFSPEIATV 94

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
               DT        ++P +       F + +KSYR+LP+   ++ +V R E   +    +
Sbjct: 95  TRVGDTPLP-EPLFIRPTSEVLMANFFKNEVKSYRDLPLIFNQWTNVMRWEK--TTRPFL 151

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALW 441
           R   F   + H   ++     E   +   I+  Y +F                       
Sbjct: 152 RTSEFLWQEGHTVHSE---RKEASDLTLKILDTYTEF----------------------- 185

Query: 442 DDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFN 501
             A+N +   +   K + +++         GA      E ++ D  G+  QCGT     +
Sbjct: 186 --AQNALLLPVIPGKKTEKEKF-------AGADSTYTIESLMHD--GQALQCGTSHYFAD 234

Query: 502 LPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIV 557
             S+   + +   +++      +   +G   R IG +I    ++    LP  +SP+Q  +
Sbjct: 235 NFSK--PYEIKFQNKEGKLEHAYSTSWGVSTRLIGAIIMTHSDDNGLVLPSMVSPVQVRL 292

Query: 558 TTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEAS 615
             I  T   ++  ++I   LK+    ++ D  +++  +KI E  IK IP+ I  G ++  
Sbjct: 293 IQIKETDEVIKVTEDIKEALKNK-YRVDIDKTDKSFGFKISEAEIKGIPLRIEIGPRDLE 351

Query: 616 ERSIGIRRFGSTTTQKVSLLDA---IPILTKE 644
              + I R  +    +V++ +    +  + KE
Sbjct: 352 NNQVTISRRDTREKIQVNVNEVTNIVDQMIKE 383


>gi|291535587|emb|CBL08699.1| prolyl-tRNA synthetase, family I [Roseburia intestinalis M50/1]
          Length = 479

 Score =  169 bits (429), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 73/427 (17%), Positives = 163/427 (38%), Gaps = 61/427 (14%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEE-INT 296
           +EE   + +  + R+ +L   +    G +     G+ I++ + + + R+ K+   E +  
Sbjct: 14  MEEDFAQWYTDVVRKAELIDYSSVK-GCMILRPAGYAIWENIQNELDRRFKETGVENVYL 72

Query: 297 PQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P  + + L + +  H + +   +  V          R   ++P +       + + ++SY
Sbjct: 73  PLFIPESLLEKEKDHVEGFAPEVAWVTYGGLNQLPER-LCVRPTSETLFCDFYKNIIQSY 131

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISI 414
           R+LP    ++ SV R E        +R R F   + H    T E+     +++ N+    
Sbjct: 132 RDLPKVYNQWCSVVRWEK--ETRPFLRSREFLWQEGHTAHATAEEAEQRTVQMLNVYADF 189

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            ++     ++    T  EK  G++A +                                 
Sbjct: 190 CEEVLAMPVVRGQKTEKEKFAGAEATY--------------------------------- 216

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFN-LPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
                E ++ D  G+  Q GT     N     F   Y +  ++  +   +++  +G   R
Sbjct: 217 ---TIEALMHD--GKALQSGTSHNFGNGFAKAFGIQYTDKDNKLQY---VYQTSWGMTTR 268

Query: 534 FIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDF 586
            IG +I    ++    LP  ++P+QA+V  I       ++ A+E+   +       + D 
Sbjct: 269 LIGAIIMVHGDDSGLVLPPRIAPVQAMVIPIQQQKDGVLDTAKEVCERIGKV-CRAKLDD 327

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERS-IGIRRFGSTTTQKVSLLDAIPILTK-- 643
            +++  +K  E  ++ IP+ I  G K+ +    + +R   +    +++L +    L +  
Sbjct: 328 SDKSPGWKFSEQEMRGIPVRIELGPKDIAAGKCVAVR-RDTREKIEIALDELEAKLPELL 386

Query: 644 ESLPPDC 650
           E +  D 
Sbjct: 387 EQIQKDM 393


>gi|296449824|ref|ZP_06891591.1| proline--tRNA ligase [Clostridium difficile NAP08]
 gi|296877888|ref|ZP_06901908.1| proline--tRNA ligase [Clostridium difficile NAP07]
 gi|296261311|gb|EFH08139.1| proline--tRNA ligase [Clostridium difficile NAP08]
 gi|296431085|gb|EFH16912.1| proline--tRNA ligase [Clostridium difficile NAP07]
          Length = 510

 Score =  169 bits (429), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 73/429 (17%), Positives = 164/429 (38%), Gaps = 57/429 (13%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
            +++  + +  +E+   + +  +  + DL   A     ++     G+ +++ +  +M +K
Sbjct: 33  NEKQFVEEITKMEDDFPQWYTDVITKTDLVDYAPVKGFMVV-KPYGYALWEKMQEFMDKK 91

Query: 287 IKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
            K+  ++    P ++ + L  +++ H + +   +  V    +   + R   ++P +    
Sbjct: 92  FKETGHKNCYFPLLIPESLLNKEAEHVEGFAPEVAWVTHGGNKKLEER-LCVRPTSETII 150

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNE 403
             ++   LKSYRELP    ++ SV R E S      +R   F   + H    T E+   E
Sbjct: 151 CTMYAKWLKSYRELPYLYNQWCSVVRWEKS--TRPFLRTSEFLWQEGHTLHETAEEAQEE 208

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            ++   +  ++ ++     ++    +  EK  G +  +                      
Sbjct: 209 TIQQLEVYKALCEELLAMPVVAGQKSESEKFAGGERTY---------------------- 246

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVM 522
                           E ++ D  G+  Q GT   +  +    F+  + +      +P  
Sbjct: 247 --------------TIEAMMHD--GKALQSGTSHFLGQHFTKAFDITFADREGNLANP-- 288

Query: 523 IHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSS---AVEYAQEIANLL 575
            +   +G+  R IG +I    +N    LP  ++PIQ ++  I +     +E   +I   L
Sbjct: 289 -YHTSWGASTRLIGGLIMTHSDNRGLVLPPRVAPIQVVIVPIAAKKGNVMETVDKIYADL 347

Query: 576 KSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           K+  +++E D R+  T  +K  E  +K +P+ I  G K+       + R  +     + L
Sbjct: 348 KAKGVAVEVDDRDNYTTGWKFNEWEMKGVPVRIEIGPKDIENNQAMVFRRDTLEKDSMPL 407

Query: 635 LDAIPILTK 643
                 +  
Sbjct: 408 EGLADAVCD 416


>gi|154309169|ref|XP_001553919.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
 gi|150852522|gb|EDN27714.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
          Length = 588

 Score =  169 bits (429), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 80/430 (18%), Positives = 159/430 (36%), Gaps = 65/430 (15%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
              E   + ++++  + ++     + SG      +   I+  + ++ + KI+  D EE +
Sbjct: 59  KKSEDFSQWYQEVVLKAEMIEYYNEISGFFILRPQSMFIWNQIRNWFQAKIETLDVEEAS 118

Query: 296 TPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
            P  L     + +  H + +   +  V  A D   ++   A++P +       ++  ++S
Sbjct: 119 FPMFLSSKSLEKEKDHVEGFAPELAWVTKAGDKDLEV-PVAVRPTSEAVMYPYYSKWIRS 177

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF-NECLKIHNLIIS 413
           +R+LP+RL ++ SV R E        +R R F   + H     E +   E L+I      
Sbjct: 178 HRDLPLRLNQWNSVVRWEAK-QTTPFLRAREFLWQEGHTAHLTEALAGEEVLQILEFYAG 236

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           +Y++     ++    T  EK  G                                     
Sbjct: 237 VYEELLAVPVVRGRKTEKEKFAGG------------------------------------ 260

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNS---HSEKCHPVMIHRAVFG 529
           +Y    E  +  + GR  Q  T   +  N    F+    +    + EK   + + +  +G
Sbjct: 261 YYTTTVEGYIP-SNGRGIQGATSHCLGQNFSKMFDITVEDPTPKNGEKAGHLHVWQNSWG 319

Query: 530 SIERFIGIMIENFKGNLPLWLSPI----QAIVTTIT--------SSAVEY--AQEIANLL 575
              R IG+M+     +  L L P     QAI+  +           A  Y   Q I + L
Sbjct: 320 LSTRVIGVMVMIHGDDKGLVLPPRIAKLQAIIVPVGITNKTTPEEKAKRYDELQNIKDTL 379

Query: 576 KSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           K   +  + D R+  T  +K  +  +K +P+ +  G ++A++  +   R  +     +  
Sbjct: 380 KKSGVRADYDIRDGYTPAWKFNDWELKGVPLRLEYGPRDAAQGVVSYARRDTGEKGTI-- 437

Query: 635 LDAIPILTKE 644
             AI  L+ E
Sbjct: 438 --AIANLSTE 445


>gi|253573561|ref|ZP_04850904.1| prolyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14]
 gi|251847089|gb|EES75094.1| prolyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14]
          Length = 483

 Score =  169 bits (429), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 74/431 (17%), Positives = 160/431 (37%), Gaps = 59/431 (13%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
           N +++    +        R +  + ++ DL   +    G I +   G++I++ + + + R
Sbjct: 3   NEEKQFVTEITPQGVDFSRWYIDVIKKADLMDYSPVR-GCIVFKPDGYEIWEHIQAELDR 61

Query: 286 KIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPG 343
           + K+  +     P  + +  + ++  H + +   +  V  A     + R  A++P +   
Sbjct: 62  RFKETGHRNAYFPLFIPESFFQKEKEHVEGFNPELPWVTEAAGEKLEER-LAIRPTSETM 120

Query: 344 HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE 403
              ++   ++SYR+LPV + ++ +V R E        +R   F   + H     EQ   E
Sbjct: 121 IGHMYEKWIQSYRDLPVLINQWANVVRWEKR--TLPFLRTSEFLWQEGHTAHENEQEARE 178

Query: 404 -CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
             +++  +     +++    ++V   T  EK  G                          
Sbjct: 179 ETMRMLEIYRDFVENYLAIPVIVGQKTPSEKFAG-------------------------- 212

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPV 521
                     A      E ++KD  GR  Q GT      N    F+  Y+N  + + +  
Sbjct: 213 ----------AVDTYSIEAMMKD--GRAVQAGTSHYLGTNFAKAFDIQYLNRENVREY-- 258

Query: 522 MIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTIT-----SSAVEYAQEIA 572
            +H   +G   R IG +I    ++    LP  ++P Q ++  I       + V  A E+ 
Sbjct: 259 -VHTTSWGVSTRLIGSLIMVHGDDRGLALPPKVAPKQVMIIPIGPPKTWEAVVGRADELF 317

Query: 573 NLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
             LK   + +  D R +    +K  E+ ++ +P+ +  G ++       +    S   + 
Sbjct: 318 AELKKAGIRVGIDDRADFRPGWKFNEYEMRGVPVRLEIGPRDMENGVCVLVSRISGEKKV 377

Query: 632 VSLLDAIPILT 642
           V     +  + 
Sbjct: 378 VQQDRLVEEVQ 388


>gi|149280220|ref|ZP_01886343.1| prolyl-tRNA synthetase [Pedobacter sp. BAL39]
 gi|149229057|gb|EDM34453.1| prolyl-tRNA synthetase [Pedobacter sp. BAL39]
          Length = 490

 Score =  169 bits (429), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 79/435 (18%), Positives = 159/435 (36%), Gaps = 72/435 (16%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
            E   + +  +  + DL        G +     G+ I++ + + + +K KD  +     P
Sbjct: 9   NEDYSQWYNDIVIKADLAE-HSSVKGCMVIKPYGYSIWEKIQAVLDQKFKDTGHSNAYFP 67

Query: 298 QVLDQHLW-QQSGHWDSYRANMFAVKCA------------DDTIKDLRTFALKPMNCPGH 344
             + +  + +++ H + +      V               D+T K      ++P +    
Sbjct: 68  LFIPKSYFSKEASHVEGFATECAVVTHYRLKNDGNGNIIVDETAKLEEELIVRPTSETII 127

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
              +   ++SYR+LP+ + ++ +V R E        +R   F   + H   T      E 
Sbjct: 128 WNTYKGWIQSYRDLPLLINQWANVVRWEMR--TRLFLRTTEFLWQEGH---TAHSTAEEA 182

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
           ++    ++++Y DF                         AEN +              + 
Sbjct: 183 IEETERMLNVYADF-------------------------AENWLA-------LPVVRGLK 210

Query: 465 TGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMI 523
           T      GA      E +++D  G+  Q GT   +  N    F+  + N   +  H   +
Sbjct: 211 TPNERFAGALDTYCIEALMQD--GKALQAGTSHFLGQNFAKAFDVKFTNKEGKIEH---V 265

Query: 524 HRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVE------YAQEIAN 573
               +G   R +G +I    ++    LP  L+PIQ ++  I     E      +  E+  
Sbjct: 266 WATSWGVSTRLMGALIMAHSDDAGLVLPPKLAPIQVVIVPIYKGDEELKKISSFVDELMP 325

Query: 574 LLKSHHLSIETDFRN-ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
            LK   +S++ D R+ +   +K  E+ +K +PI +  G ++    ++ + R  +   Q V
Sbjct: 326 KLKRLGISVKYDDRDTQRPGFKFAEYELKGVPIRLAIGGRDMENGTVELARRDTREKQTV 385

Query: 633 ---SLLDAIPILTKE 644
               L   I  L +E
Sbjct: 386 IQDGLEIHIAQLLEE 400


>gi|89100420|ref|ZP_01173283.1| prolyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
 gi|89084849|gb|EAR63987.1| prolyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
          Length = 494

 Score =  169 bits (429), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 76/442 (17%), Positives = 156/442 (35%), Gaps = 62/442 (14%)

Query: 217 LSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIF 276
           L RI+G     +         +EE   + +  +  + DL   +     +I     G+ ++
Sbjct: 11  LIRIWGAIMAKEFVKEITA--MEEDFAQWYTDVVTKADLIDYSSVRGSMII-RPYGYSLW 67

Query: 277 QTLISYMRRKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTF 334
             + + + R+IK+  +E +  P  + + L  ++  H + +   +  V          R  
Sbjct: 68  DNIKNELDRRIKETGHENVYMPMFIPESLLQKEKDHIEGFAPEVAWVTHGGSEELAER-L 126

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV- 393
            ++P +       + + + SYR+LP    ++ +V R E   +    +R   F   + H  
Sbjct: 127 VVRPTSEVLFCEHYKNIIHSYRDLPKLYNQWANVVRWEK--TTRPFLRTLEFLWQEGHTC 184

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
             T E    E  K+ ++   + ++     ++    T  EK  G                 
Sbjct: 185 HATDEDAHEETTKMLDVYADLCENVLAIPVLKGRKTEKEKFAG----------------- 227

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVN 512
                              A +    E ++ D  G+  Q GT   +       F   Y +
Sbjct: 228 -------------------AKFTYTIESLMHD--GKALQTGTSHHLGDGFAKAFGIQYSD 266

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTI---TSSAV 565
              E  H   +H+  +G   R IG MI     N    +P  ++P Q ++  +       +
Sbjct: 267 REGELQH---VHQTSWGLTTRVIGAMIMVHGDNRGLIIPPRIAPTQLMIVPVAQHKEGVL 323

Query: 566 EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
           ++  E+   L      +  D  ++   +K  E+ +K IP+ +  G K+     + + R  
Sbjct: 324 DFCYELKEKLGKS-FRVGIDSSDKKPGWKFNEYEMKGIPLRLEAGPKDIENNQVVLVRRD 382

Query: 626 STTT---QKVSLLDAIPILTKE 644
           +      Q      AI  L ++
Sbjct: 383 TGEKLFVQAEGAEQAIAGLLED 404


>gi|288870320|ref|ZP_06113698.2| proline--tRNA ligase [Clostridium hathewayi DSM 13479]
 gi|288867624|gb|EFC99922.1| proline--tRNA ligase [Clostridium hathewayi DSM 13479]
          Length = 479

 Score =  169 bits (428), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 69/425 (16%), Positives = 153/425 (36%), Gaps = 58/425 (13%)

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISY 282
                 ++L + +  ++    + +  + ++ +L   +     ++     G+ I++ +   
Sbjct: 1   MIMAKDKKLVEAITSMDVDFAQWYTDVVKKAELIDYSSVKGCMVI-KPAGYAIWENIQKE 59

Query: 283 MRRKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
           +  + K    E +  P  + + L  ++  H + +   +  V          R   ++P +
Sbjct: 60  LDSRFKTVGVENVYMPMFIPESLLQKEKDHVEGFAPEVAWVTYGGLEPLTER-LCVRPTS 118

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQ 399
                  +   + SYR+LP    ++ SV R E   +    +R R F   + H    T E 
Sbjct: 119 ETLFCDFYARDIHSYRDLPKVYNQWCSVVRWEK--TTRPFLRSREFLWQEGHTAHATAED 176

Query: 400 MFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSS 459
                 ++ NL     ++     ++    T  EK  G++A +                  
Sbjct: 177 AQARTEQMLNLYADFCEEVLAMPVIRGQKTDKEKFAGAEATY------------------ 218

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKC 518
                               E ++ D  G+  Q GT           F   Y +  ++  
Sbjct: 219 ------------------TIEALMHD--GKALQSGTSHNFGDGFAKAFEIQYSDKENKLQ 258

Query: 519 HPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEI 571
           +   +H+  +G   R IG +I    ++    LP  ++P+Q ++  I       +E A EI
Sbjct: 259 Y---VHQTSWGMSTRLIGGIIMVHGDDNGLVLPPRIAPVQVMIVPIQQAKEGVLEKAAEI 315

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
            ++L      ++ D  +++  +K  E  ++ IP+ +  G K+       + R  +     
Sbjct: 316 KSVLS--GYRVKVDDTDKSPGWKFAESEMRGIPVRVEIGPKDIEAGQAILVRRDTHEKIS 373

Query: 632 VSLLD 636
           VSL +
Sbjct: 374 VSLEE 378


>gi|282877938|ref|ZP_06286747.1| proline--tRNA ligase [Prevotella buccalis ATCC 35310]
 gi|281299939|gb|EFA92299.1| proline--tRNA ligase [Prevotella buccalis ATCC 35310]
          Length = 493

 Score =  169 bits (428), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 71/447 (15%), Positives = 156/447 (34%), Gaps = 75/447 (16%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
              E+  + +  L  + DL   +     ++     G+ I++ +   + +  K+   +   
Sbjct: 10  KRSENYSQWYNDLVVKADLAEQSAVRGCMVI-KPYGYAIWEKMQQQLDKMFKETGAQNAY 68

Query: 296 TPQVLDQHLW-----------QQSGHWDSYR---ANMFAVKCADDTIKDLRTFALKPMNC 341
            P ++ +              ++      YR   +        D   K      ++P + 
Sbjct: 69  FPLLIPKSFLSREAEHVKGFAKECAVVTHYRLKSSETGDSVEVDPAAKLEEELIIRPTSE 128

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
                 + + ++S+R+LP+   ++ +V R E        +R   F   + H   T     
Sbjct: 129 TIIWNTYKNWIQSWRDLPLMCNQWCNVMRWEMR--TRPFLRTSEFLWQEGH---TAHATR 183

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E  +    ++ +Y DF                      W             +      
Sbjct: 184 EEAEEEAQKMLKVYADFA-------------------EQW-------------MAVPVVQ 211

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHP 520
            + +      GA      E +++D  G+  Q GT   +  N    F+  Y+N  ++   P
Sbjct: 212 GVKSETERFAGALDTYTIEAMMQD--GKALQSGTSHFLGQNFAKSFDVTYLNKENK---P 266

Query: 521 VMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANL-- 574
             +    +G   R IG +I    ++    LP  L+PIQ ++  I +   E  + IA+   
Sbjct: 267 EYVWATSWGVSTRLIGALIMTHSDDNGLVLPPKLAPIQVVIIPI-AKNEEQLKAIADKLN 325

Query: 575 -----LKSHHLSIETDFRNET-INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
                LK   ++++ D  N     +K  ++ +K +P+ ++ G ++    +I + R  +  
Sbjct: 326 PFMDDLKKLGITVKYDDSNNKRPGFKFADYELKGVPVRLVMGGRDLENNTIEVMRRDTLE 385

Query: 629 TQKVSLL---DAIPILTKESLPPDCQK 652
            + + +    D I  L  +      +K
Sbjct: 386 KETIPVEGLADYIYKLLDDIQANILKK 412


>gi|317471035|ref|ZP_07930410.1| prolyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
 gi|316901476|gb|EFV23415.1| prolyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
          Length = 478

 Score =  169 bits (428), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 74/430 (17%), Positives = 167/430 (38%), Gaps = 57/430 (13%)

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR 284
              +++L + +  ++E   + +  + ++ +L   +    G +     G+ I++ +   M 
Sbjct: 1   MAKEKKLVEAITAMDEDFAQWYTDVVKKAELIEYSSVK-GCMILRPNGYAIWENIQKVMD 59

Query: 285 RKIKDDYEE-INTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
            K K+   E +  P  + + L + +  H + +   +  V    +   + R   ++P +  
Sbjct: 60  AKFKETGVENVAMPMFIPESLLEREKDHVEGFAPEVAWVTHGGNKKLEER-LCVRPTSET 118

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMF 401
                +++ ++SYR+LP    ++ SV R E S      +R   F   + H    T ++  
Sbjct: 119 LFCDFYSNIIQSYRDLPKLYNQWVSVVRWEKS--TRPFLRTSEFYWQEGHTAHATADEAE 176

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
              +++ N+     + +    ++    T  EK  G++A +                    
Sbjct: 177 ERTVQMLNMYADFCEQYLAIPVVKGQKTEKEKFAGANATY-------------------- 216

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHP 520
                             E ++ D  G+  Q GT           F+  Y + +++  + 
Sbjct: 217 ----------------TIEALMHD--GKALQSGTSHNFGDGFAKAFDIQYTDKNNKLQY- 257

Query: 521 VMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIAN 573
             +H+  +G   R IG +I    ++    LP  ++P+Q ++  I       +E A+EI  
Sbjct: 258 --VHQTSWGMSTRIIGAIIMVHGDDSGLVLPPKIAPVQTMIVPIMQKKEGVLEKAEEIRE 315

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            L  +   ++ D  +++  +K  E  ++ IP  I  G K+  +    I R  +     VS
Sbjct: 316 RLSKN-YKVKVDDSDKSPGWKFSEQEVQGIPTRIEIGPKDIEKNQAVIVRRDTREKIFVS 374

Query: 634 LLDAIPILTK 643
           L +    L++
Sbjct: 375 LDEIESKLSE 384


>gi|160881955|ref|YP_001560923.1| prolyl-tRNA synthetase [Clostridium phytofermentans ISDg]
 gi|259511590|sp|A9KL35|SYP_CLOPH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|160430621|gb|ABX44184.1| prolyl-tRNA synthetase [Clostridium phytofermentans ISDg]
          Length = 477

 Score =  169 bits (428), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 74/440 (16%), Positives = 160/440 (36%), Gaps = 65/440 (14%)

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR 284
               ++L + +  ++E   + +  + ++ +L   +    G   +   G+ I++ +   + 
Sbjct: 1   MANDKKLVESITSMDEDFAQWYTDVVKKAELVDYSGVR-GCTIFRPAGYAIWENIQKELD 59

Query: 285 RKIKDDYEE-INTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
            + K    E +  P  + + L  ++  H + +   +  V          R   ++P +  
Sbjct: 60  ARFKATGVENVYMPMFIPESLLNKEKDHVEGFAPEVAWVTHGGGEQLQER-LCVRPTSET 118

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN 402
                ++H ++SYR+LP    ++ SV R E   +    +R   F   + H      +   
Sbjct: 119 LFCDFYSHIIESYRDLPKLYNQWCSVVRWEK--TTRPFLRTLEFLWQEGHTAHATAEEAE 176

Query: 403 -ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
              +++ NL     ++     ++    T  EK  G++A +                    
Sbjct: 177 ERTIQMLNLYADFCEEVLAIPMVRGRKTDKEKFAGAEATY-------------------- 216

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHP 520
                             E ++ D  G+  Q GT           FN  Y +  ++  + 
Sbjct: 217 ----------------TIEALMHD--GKALQSGTSHNFGDGFAKAFNIQYTDKENKLQY- 257

Query: 521 VMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTI---TSSAVEYAQEIAN 573
             +H+  +G   R IG +I     N    LP  ++P Q ++  I       +E A E+  
Sbjct: 258 --VHQTSWGMTTRLIGALIMVHGDNSGLVLPPRIAPTQVVIVPIMQKKEGVLEKAAELRE 315

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            L +    ++ D  +++  +K  EH ++ IP+ +  G K+       + R  +     VS
Sbjct: 316 KLGA--FRVKVDDSDKSPGWKFSEHEMRGIPVRVEIGPKDIEANQAVLVRRDTREKTVVS 373

Query: 634 LL-------DAIPILTKESL 646
           L        + +  + KE L
Sbjct: 374 LDEIDTKIGEILEAMQKEML 393


>gi|88657672|ref|YP_507541.1| prolyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas]
 gi|114152195|sp|Q2GG92|SYP_EHRCR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|88599129|gb|ABD44598.1| prolyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas]
          Length = 424

 Score =  169 bits (427), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 78/419 (18%), Positives = 155/419 (36%), Gaps = 36/419 (8%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQH 303
            H+   R   +  IA   SG+  W   G K+ + + + +R ++      EI  P +    
Sbjct: 22  SHKYSIRAGLIKQIA---SGIYTWLPLGLKVLKNIENIVREEMNKSGSLEILMPLIQPAS 78

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SG +D Y + M  +     T ++ R     P +      +      S+++LP+ L 
Sbjct: 79  LWKESGRYDDYGSEMLRI-----TDRNQREMLFGPTHEEVITDILRTTPVSHKDLPLILY 133

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDFGFEK 422
           +    +R+E     +G+MR R F   DA+ F             +    I I++  G   
Sbjct: 134 QIQWKFRDELRPR-YGIMRCREFLMKDAYSFDKDFSGAISSYNLMFKTYIKIFQKLGLTP 192

Query: 423 IMVKLSTRPEKRVGSDALWDDA---ENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           I VK  + P     S      A   E+ +    D I+  + + I+   +      Y    
Sbjct: 193 IAVKADSGPIGGNLSHEFHVLANSGESTLYYDQDIIELMNSESIDVEKIKNT---YTAAD 249

Query: 480 EYILKDA---------IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG 529
           +     A         I +  + G I  +        NA + +S++ K    ++    +G
Sbjct: 250 DMHDPQACPISSDKVKISKGIEIGHIFHLGDKYSKPMNANFCDSNNNK----LLQMGCYG 305

Query: 530 S-IERFIGIMIENFKGNLP-LWLSPIQA--IVTTITSSAVEYAQEIANLLK-SHHLSIET 584
             + R +  +IE F  N   +W   +           ++ +  +++A  L    +  +  
Sbjct: 306 IGVSRLVAAIIEVFHDNKGIIWPETVAPFKFSLVNLYTSNDKCKKVAENLHMQLYDDVLY 365

Query: 585 DFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           D  +++   K+    +  +P  +I G     +  I +R   +     +S    +  L K
Sbjct: 366 DDTDDSPGIKLARTDLLGMPWQVIIGKSTVEQDLIEVRNRLTKDKVLISTEQFLNKLKK 424


>gi|225386498|ref|ZP_03756262.1| hypothetical protein CLOSTASPAR_00245 [Clostridium asparagiforme
           DSM 15981]
 gi|225047417|gb|EEG57663.1| hypothetical protein CLOSTASPAR_00245 [Clostridium asparagiforme
           DSM 15981]
          Length = 499

 Score =  169 bits (427), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 65/425 (15%), Positives = 154/425 (36%), Gaps = 56/425 (13%)

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYM 283
                +++ + +  ++    + +  + ++ +L   A     ++     G+ I++ + + +
Sbjct: 20  IMANDKKMVEAITSMDVDFAQWYTDVVKKAELCDYASVKGCMVI-KPAGYAIWENIQNEL 78

Query: 284 RRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
            R+ K    + +  P  + + L + +  H + +   +  V          R   ++P + 
Sbjct: 79  DRRFKATGVQNVYMPLFIPESLLEKEKDHVEGFAPEVAWVTHGGLEPLQER-MCVRPTSE 137

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA-HVFCTKEQM 400
                 +   + SYR+LP    ++ SV R E   +    +R R F   +      T E+ 
Sbjct: 138 TLFCDFYAKDIHSYRDLPRVYNQWCSVVRWEK--TTRPFLRSREFLWQEGHTAHATAEEA 195

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQ 460
               +++ NL     ++     ++    T  EK  G++A +                   
Sbjct: 196 EERTIQMLNLYADFCEEVLAIPVVRGQKTDKEKFAGAEATY------------------- 236

Query: 461 DRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCH 519
                              E ++ D  G+  Q GT           F   + +  +   +
Sbjct: 237 -----------------TIESLMHD--GKALQSGTSHNFGDGFAKAFEIQFTDKDNTLKY 277

Query: 520 PVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIA 572
              +H+  +G   R IG +I    ++    LP  ++PIQ +V  +       ++ A E+ 
Sbjct: 278 ---VHQTSWGMTTRMIGAIIMVHGDDNGLVLPPRIAPIQIMVVPVQQQKPGVLDKAFELK 334

Query: 573 NLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
             L     S++ D   ++  +K  +  ++ IP+ +  G K+  +    + R  +     +
Sbjct: 335 ERLTRAGFSVKVDDSEKSPGWKFADCEMRGIPLRVEIGPKDMEKNQAVLVRRDNHEKTFI 394

Query: 633 SLLDA 637
           SL + 
Sbjct: 395 SLDEL 399


>gi|148655910|ref|YP_001276115.1| prolyl-tRNA synthetase [Roseiflexus sp. RS-1]
 gi|166980153|sp|A5UU62|SYP_ROSS1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|148568020|gb|ABQ90165.1| prolyl-tRNA synthetase [Roseiflexus sp. RS-1]
          Length = 480

 Score =  169 bits (427), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 74/434 (17%), Positives = 153/434 (35%), Gaps = 61/434 (14%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
              + +    +   + +  + ++ DL   AE   G I +   G+ I++ +   +  +IK 
Sbjct: 1   MPKEGITPRAQDYSQWYLDIVQQADLADYAEVVKGCIVFKPTGYAIWEAIQRGLDDRIKA 60

Query: 290 -DYEEINTPQVLDQHL-WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
             +     P ++ +    +++ H + +   +  V  A         + ++P +       
Sbjct: 61  TGHVNAYFPLLIPKSFLMKEAEHVEGFAPEVAEVTRAGGEDL-AEPYVIRPTSETIIGYF 119

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
           ++  ++SYR+LP+ + ++ +V R E        +R   F   + H     E+      + 
Sbjct: 120 YSKWVRSYRDLPLLINQWANVMRWEMR--TRPFLRTTEFLWQEGHTVHATEEDAER--ET 175

Query: 408 HNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGV 467
             ++  +Y DF                                V   +       + +  
Sbjct: 176 LLILHEVYADF--------------------------------VEKEMAIPVIKGLKSEK 203

Query: 468 LLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
               GA      E +++D  GR  Q GT   +  N    F+  Y +  +   +       
Sbjct: 204 EKFPGALRSYCIEAMMQD--GRALQAGTSHNLGQNFARAFDITYTDQQNTIQYA---WTT 258

Query: 527 VFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVEY--AQEIANLLKSHHL 580
            +G   R IG +I    ++    +P  L+P Q +V  I  +  E     E    + +   
Sbjct: 259 SWGVSTRLIGALIMTHSDDEGLVIPPRLAPTQVVVVPIYRNDAERSVVMEAVQRMTAEWK 318

Query: 581 ---SIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS--- 633
                + D R+  T  +K  E  +K +PI +  G K+  + S+ I R      +  S   
Sbjct: 319 GRLRFKIDDRDNLTPGFKFNEWELKGVPIRVEIGPKDIEKGSVAIARRDQPGREGKSFVP 378

Query: 634 ---LLDAIPILTKE 644
              L D +  L +E
Sbjct: 379 QDGLTDRLTALLEE 392


>gi|157690994|ref|YP_001485456.1| prolyl-tRNA synthetase [Bacillus pumilus SAFR-032]
 gi|157679752|gb|ABV60896.1| proline--tRNA ligase [Bacillus pumilus SAFR-032]
          Length = 477

 Score =  169 bits (427), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 74/437 (16%), Positives = 166/437 (37%), Gaps = 59/437 (13%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++++  + +  +E+   + +  +  +  L   +     +I     G+KI++ +   + R+
Sbjct: 2   SKKQFVEKITSMEDDFAQWYTDVVTKARLVDYSSVRGSMIIQ-PYGFKIWENIRDELDRQ 60

Query: 287 IKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           IK+  +E +  P  + + L Q +  H + +   +  V    ++    R   ++P +    
Sbjct: 61  IKETGHENVYMPLFIPESLLQQEKDHIEGFAPEVAWVTHGGESELQER-LCVRPTSEVLF 119

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNE 403
              + + + SYR+LP    ++ +V R E   +    +R   F   + H    T+++   E
Sbjct: 120 AEHYKNIIHSYRDLPKLYNQWANVVRWEK--TTRPFLRTLEFLWQEGHTCHETEQEAIEE 177

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             ++ ++  S+ ++     ++    T  EK  G                           
Sbjct: 178 TERMLHIYASLCEELLAIPVIKGRKTEKEKFAG--------------------------- 210

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFN-LPSRFNAFYVNSHSEKCHPVM 522
                    A +    E ++ D  G+  Q  T     N     F   ++N   +  H   
Sbjct: 211 ---------ARFTYTVESLMHD--GKALQTATSHFFGNGFAKAFGIEFLNREGKLEH--- 256

Query: 523 IHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIANLL 575
           + +  +G   R IG MI    ++    LP  ++P Q  +  I       +++A E+ + L
Sbjct: 257 VQQTSWGFTTRIIGAMIMVHGDDRGLVLPPNIAPTQVRIVPIASHKEGVLDHAYELKDRL 316

Query: 576 KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
                  + D  ++   +K  E  ++ IP+ +  G K+  +  + + R  +   Q V+L 
Sbjct: 317 TRI-ARADIDASDKQPGWKFNECEMQGIPLRVEVGPKDIEKGQVMLARRDTGEKQAVTLD 375

Query: 636 DAIPILTKESLPPDCQK 652
                +T  S   D Q+
Sbjct: 376 ALEQTIT--STLEDIQR 390


>gi|188585074|ref|YP_001916619.1| prolyl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|259511608|sp|B2A5T8|SYP_NATTJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|179349761|gb|ACB84031.1| prolyl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 483

 Score =  169 bits (427), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 78/438 (17%), Positives = 168/438 (38%), Gaps = 60/438 (13%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
             +E  + +    E   + +  + ++  L   A     ++     G+ I++ +   + R+
Sbjct: 4   NNEEFVKEITPQSEDYSQWYLDVIKKTKLVDYAPVKGCMVI-RPYGYAIWEKMKEGLDRR 62

Query: 287 IKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           IK+  +E    P  + + L  +++ H + +   +  +    D      + A++P +    
Sbjct: 63  IKETGHENAYFPLFIPESLLQKEADHVEGFAPEVAWITKGGDEEL-SESLAVRPTSEAMF 121

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +++  ++S+R+LPV + ++ +V R E S      +R   F   + H     E+     
Sbjct: 122 GEMYSDWIQSWRDLPVLINQWANVVRWEKS--TKPFLRTSEFLWQEGHTAHRTEEDAE-- 177

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            +    ++ +YKDF                                V + +     + + 
Sbjct: 178 -EEALQMLDVYKDF--------------------------------VENDMAIPVLNGLK 204

Query: 465 TGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMI 523
           +      GA      E ++ D  GR  Q GT   +  +    F+  +++   E+ +   +
Sbjct: 205 SEKEKFAGALRTFCIEALMSD--GRALQAGTSHNLGQHFAKVFDITFLDQDDERKY---V 259

Query: 524 HRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSS-----AVEYAQEIANL 574
            +  +G   R IG +I    +N    +P  ++P Q ++  IT        +E + ++   
Sbjct: 260 WQTSWGVSTRLIGALIMVHGDNRGLKIPPKVAPHQLVMVPITPKKQREQVLEESDKLYQE 319

Query: 575 LKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
           LK     ++ D R E T  +K  E  +K +PI +  G K+  +  + + R  +     V 
Sbjct: 320 LKDK-FRVKLDNREEHTPGWKFNEWEMKGVPIRLEIGPKDIEKDQVVLVRRDTDEKMFVK 378

Query: 634 LLDAIPILTKESLPPDCQ 651
             + I  L  E L  D Q
Sbjct: 379 RDELIDKL--EELIEDIQ 394


>gi|297624797|ref|YP_003706231.1| prolyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
 gi|297165977|gb|ADI15688.1| prolyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
          Length = 484

 Score =  169 bits (427), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 71/424 (16%), Positives = 152/424 (35%), Gaps = 62/424 (14%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
             E     + ++  + DL  ++     +I     G+ I++ +  ++    K   +E +  
Sbjct: 12  QHEDFSAWYNEVVYKADLADLSPVRGSIIV-KPYGYAIWENIQRHLDAMFKATGHENLYF 70

Query: 297 PQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P ++    ++ ++ H + +   +  V  A     +    A++P +       ++  ++SY
Sbjct: 71  PLLIPTSFFEREADHVEGFSPELAVVTHAGGKALE-EPLAIRPTSETIIGEAYSKWIQSY 129

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISI 414
           R+LP+   ++ +V R E        +R   F   + H    T E+   E  ++  +    
Sbjct: 130 RDLPLLYNQWCNVLRWELR--TRPFLRTTEFLWQEGHTAHATAEEAMAETRQMLEIYAEF 187

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            + +G   +     T  E+  G                                    A 
Sbjct: 188 AERYGALPVFRGEKTPGERFAG------------------------------------AQ 211

Query: 475 YGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
                E +++D  G+  Q GT      N    FN  + + ++++     +H   +G   R
Sbjct: 212 NTYTIEAMMRD--GKALQAGTSHYMGDNFARAFNITFNDVNNQQ---AFVHTTSWGLSWR 266

Query: 534 FIGIMIENFKGN----LPLWLSPIQAIVTTIT--------SSAVEYAQEIANLLKSHHLS 581
           FIG +I     +    LP  L+P Q +V  I         ++ +    ++   LK   + 
Sbjct: 267 FIGALIMTHGDDKGLILPPPLAPHQVVVVPIYRADDDAARAAVLAEVGKLHAALKDAGVR 326

Query: 582 IETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
           ++ D R   +  +K  E   K +P+ +  G K+    +  +    S   + V L +    
Sbjct: 327 VKVDDRQGMSPGWKFNEWEQKGVPLRLELGPKDLEAGAALLADRLSGEKRPVKLANLAQT 386

Query: 641 LTKE 644
           L  E
Sbjct: 387 LPDE 390


>gi|218295277|ref|ZP_03496113.1| prolyl-tRNA synthetase [Thermus aquaticus Y51MC23]
 gi|218244480|gb|EED11005.1| prolyl-tRNA synthetase [Thermus aquaticus Y51MC23]
          Length = 477

 Score =  168 bits (426), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 70/407 (17%), Positives = 143/407 (35%), Gaps = 60/407 (14%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
                   + ++ ++ +L         ++     G+ I++ +   + +  K+  ++    
Sbjct: 10  QSVDFSEWYLEVIQKAELADYGPVRGTIVL-RPYGYAIWENIQKTLDQMFKETGHQNAYF 68

Query: 297 PQVLDQHL-WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P  +      +++ H + +   +  V  A     +    A++P +      +++  ++SY
Sbjct: 69  PLFIPMSFLRKEAEHVEGFSPELAVVTHAGGEELE-EPLAVRPTSETVIGYMWSKWIQSY 127

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISI 414
           R+LP  L ++G+V R E        +R   F   + H    T+E+   E  ++  +    
Sbjct: 128 RDLPQLLNQWGNVVRWELR--TRPFLRTSEFLWQEGHTAHATREEAEAEVRRMLGIYA-- 183

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
                                             K   D       + + T      GA 
Sbjct: 184 ----------------------------------KLARDYAAIPVIEGLKTEKEKFAGAV 209

Query: 475 YGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           Y    E +++D  G+  Q GT      N    F+  + +   +  +   +H   +G   R
Sbjct: 210 YTTTIEAMMRD--GKALQSGTSHYLGENFARAFDIKFQDRDLQVKY---VHTTSWGLSWR 264

Query: 534 FIGIMIENFKGN----LPLWLSPIQAIVTTIT-----SSAVEYAQEIANLLKSHHLSIET 584
           FIG ++     +    LP  L+PIQ ++  I         +E A  +   L +  L    
Sbjct: 265 FIGAIVMTHGDDKGLILPPRLAPIQVVIVPIYREENREKVLEAAFALKKDLLARGLRAHL 324

Query: 585 DFRNE-TINYKIREHSIKKIPIIIICGDKEASERS-IGIRRFGSTTT 629
           D R++ T  YK  E  +K +P  +  G K+      +   R G   T
Sbjct: 325 DDRDQYTPGYKFHEWELKGVPYRVELGPKDLEVGQAVLASRLGGKET 371


>gi|149182619|ref|ZP_01861089.1| prolyl-tRNA synthetase [Bacillus sp. SG-1]
 gi|148849697|gb|EDL63877.1| prolyl-tRNA synthetase [Bacillus sp. SG-1]
          Length = 476

 Score =  168 bits (426), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 66/417 (15%), Positives = 149/417 (35%), Gaps = 57/417 (13%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
           ++E   + +  +  + +L   +     +I     G+ +++ +   + ++IK+  +E +  
Sbjct: 12  MDEDFAQWYTDVVTKAELIDYSSVRGSMII-RPYGYALWENIKEELDKRIKETGHENVYM 70

Query: 297 PQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P  + + L Q +  H + +   +  V    D     R   ++P +       + + + SY
Sbjct: 71  PLFIPESLLQREKDHIEGFAPEVAWVTHGGDEELQER-LCVRPTSEVLFGEHYKNIIHSY 129

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISI 414
           R+LP    ++ +V R E   +    +R   F   + H    T E+   E +K+  +   +
Sbjct: 130 RDLPKLYNQWANVVRWEK--TTRPFLRTLEFLWQEGHTCHETDEEAHEETVKMLEVYAEL 187

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            ++     ++    T  EK  G                                    A 
Sbjct: 188 CENILAIPVIKGQKTEKEKFAG------------------------------------AK 211

Query: 475 YGPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           Y    E ++ D  G+  Q GT   +       F   + +      +   + +  +G   R
Sbjct: 212 YTYTIESLMHD--GKALQSGTSHHLGDGFAKAFGIQFSDREGNLQY---VQQTSWGFTTR 266

Query: 534 FIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDF 586
            IG MI    ++    +P   +P Q ++  I       +++A  +   L      +  D 
Sbjct: 267 IIGAMIMVHGDDRGLVIPPKAAPTQLMIVPIAQHKEGVLDFAYNLKERLAGS-FRVGIDA 325

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            ++   +K  E+ +K IP+ +  G ++     + I R  +     V L +    + +
Sbjct: 326 SDKKPGWKFNEYEMKGIPLRLEAGPRDIENNQVVIARRDTGDKVTVGLDELENRVAQ 382


>gi|194017643|ref|ZP_03056254.1| prolyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
 gi|194010915|gb|EDW20486.1| prolyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
          Length = 477

 Score =  168 bits (426), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 74/437 (16%), Positives = 165/437 (37%), Gaps = 59/437 (13%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++++  + +  +E+   + +  +  +  L   +     +I     G+KI++ +   + R+
Sbjct: 2   SKKQFVEKITSMEDDFAQWYTDVVTKARLVDYSSVRGSMIIQ-PYGFKIWENIRDELDRQ 60

Query: 287 IKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           IK+  +E +  P  + + L Q +  H + +   +  V    ++    R   ++P +    
Sbjct: 61  IKETGHENVYMPLFIPESLLQQEKDHIEGFAPEVAWVTHGGESELQER-LCVRPTSEVLF 119

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNE 403
              + + + SYR+LP    ++ +V R E   +    +R   F   + H    T+++   E
Sbjct: 120 AEHYKNIIHSYRDLPKLYNQWANVVRWEK--TTRPFLRTLEFLWQEGHTCHETEQEAIEE 177

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             ++ ++  S+ ++     ++    T  EK  G                           
Sbjct: 178 TERMLHIYASLCEELLAIPVIKGRKTEKEKFAG--------------------------- 210

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFN-LPSRFNAFYVNSHSEKCHPVM 522
                    A +    E ++ D  G+  Q  T     N     F   ++N   +  H   
Sbjct: 211 ---------ARFTYTVESLMHD--GKALQTATSHFFGNGFAKAFGIEFLNREGKLEH--- 256

Query: 523 IHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIANLL 575
           + +  +G   R IG MI    ++    LP  ++P Q  +  I       +++A E+   L
Sbjct: 257 VQQTSWGFTTRIIGAMIMVHGDDRGLVLPPNIAPTQVRIVPIASHKEGVLDHAYELKERL 316

Query: 576 KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
                  + D  ++   +K  E  ++ IP+ +  G K+  +  + + R  +   Q V+L 
Sbjct: 317 TRI-ARADIDASDKQPGWKFNECEMQGIPLRVEVGPKDIEKGQVMLARRDTGEKQAVTLD 375

Query: 636 DAIPILTKESLPPDCQK 652
                +T  S   D Q+
Sbjct: 376 ALEQTIT--STLEDIQR 390


>gi|124515073|gb|EAY56584.1| Prolyl-tRNA synthetase [Leptospirillum rubarum]
          Length = 422

 Score =  168 bits (426), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 73/409 (17%), Positives = 142/409 (34%), Gaps = 27/409 (6%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK- 288
            +        E+E   HR + R   +  +A    GV  +     +  + + S +R ++  
Sbjct: 7   PVQTLHEEPAEAEVVSHRLMLRAGFVRKLA---GGVYSYLPMAVRALRKVESIIREEMNS 63

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
              +E+  P +    LW+++G W +Y   +F +       +  R FAL P +      + 
Sbjct: 64  AGGQEVLLPALQPSDLWEKTGRWQAYGPELFRLHD-----RHERAFALGPTHEEVITDLV 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KI 407
           +  ++SYR+LP    +  + +R+E      G++R R F   DA+ F   E+   +   ++
Sbjct: 119 SQIIRSYRQLPFLAYQIQTKFRDERRPRF-GILRGREFIMKDAYSFSASEENARQIYARM 177

Query: 408 HNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGV 467
                 I+   G +  MV+  +       S      A++    V+   K S    I    
Sbjct: 178 QEAYGRIFLRLGLDHRMVEADSGLIGGNLSHEFMVMADSGEDTVVTCEKCSWASNIEKAP 237

Query: 468 LLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAV 527
                   G          +G  +  G         +  ++        K  P  +    
Sbjct: 238 DARVCPVCGSALTSRTAIEVGHVFYLGHKYSAPMETTFLDSAG------KEVPFFMGCYG 291

Query: 528 FGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTITSSAVEY---AQEIANLLKSHHL 580
            G   R +   IE    +     P+ ++P +  V  +     E       + +L      
Sbjct: 292 IGVS-RILAATIEQSHDDKGIIWPVAMAPYRTAVLPLGPGMSERREVLSLLESLESLWPG 350

Query: 581 SIETDFRNETINYKIREHSIKKIPIIIICGDK--EASERSIGIRRFGST 627
               D R      K ++  ++  P  +I GD+  +     + IRR G  
Sbjct: 351 EAYFDDREIRPGMKFQDADLRGFPFQVILGDRHVDKGNGEVKIRRTGER 399


>gi|169347325|ref|ZP_02866263.1| hypothetical protein CLOSPI_00040 [Clostridium spiroforme DSM 1552]
 gi|169293942|gb|EDS76075.1| hypothetical protein CLOSPI_00040 [Clostridium spiroforme DSM 1552]
          Length = 479

 Score =  168 bits (426), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 74/419 (17%), Positives = 164/419 (39%), Gaps = 60/419 (14%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
           +E+   + +  + ++ +L   +    G I +    + +++ +  YM ++ K+  +E +  
Sbjct: 13  MEDDFAQWYTDVCKKAELMDYSSIK-GFIIYRPYSYAMWEAIQQYMDKRFKETGHENVYM 71

Query: 297 PQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P ++ Q L  ++S H + +     A+              ++P +       +   + SY
Sbjct: 72  PMLIPQSLLQKESDHVEGFAPE-CAIVTKGGMDNLEENLIIRPTSETLFCEHYAKIVNSY 130

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISI 414
           R+LP    ++ SV R E   +    +R   F   + H    TKE+ ++E L++  +    
Sbjct: 131 RDLPKLYNQWCSVVRWEK--TTRPFLRGSEFLWQEGHTIHATKEEAYHETLQMLKIYEET 188

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            +D     ++    T  EK  G++A +                                 
Sbjct: 189 ARDLLAIPMVTGRKTEREKFAGAEATY--------------------------------- 215

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFN-LPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
                E ++ D  G+  Q GT           F+  +++  ++  +   +++  +G   R
Sbjct: 216 ---TIEALMHD--GKALQSGTTHYFGQGFAKAFDMKFLSKENKLEY---VYQTSWGVSTR 267

Query: 534 FIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDF 586
            +G +I    +N    LP  ++PIQ ++  I       ++ A E+   LK+  + ++ D 
Sbjct: 268 LLGAIIMVHGDNNGLVLPPRVAPIQVMIIPIQQQKEGVLDKAYELEQRLKAVGIRVKVDA 327

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASER--SIGIRRFGSTTTQKV--SLLDAIPIL 641
            ++T  +K  +  ++ IP+ +  G K+ +     +  R  G      +  SL D I  L
Sbjct: 328 SDKTPGWKFSDAEMRGIPLRLEIGPKDIANDVCVLAKRNDGMKAVYSLDGSLEDTIKQL 386


>gi|291294868|ref|YP_003506266.1| prolyl-tRNA synthetase [Meiothermus ruber DSM 1279]
 gi|290469827|gb|ADD27246.1| prolyl-tRNA synthetase [Meiothermus ruber DSM 1279]
          Length = 477

 Score =  168 bits (426), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 64/412 (15%), Positives = 146/412 (35%), Gaps = 58/412 (14%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
             +     + ++  + DL         ++     G+ I++ +   + R  K+  ++    
Sbjct: 10  QSQDFNEWYNEVVLKADLVDYGPVRGTMVV-KPYGYAIWENIQRELDRMFKETGHQNAYF 68

Query: 297 PQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P  +      +++ H + +   +  V  A     +    A++P +      ++   +++Y
Sbjct: 69  PLFIPISFLQKEAEHVEGFAPELAVVTQAGGETLE-EPLAVRPTSETIIGHMWAKWIRTY 127

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           R+LP  L ++ SV R E        +R   F   + H     ++   E  +    + +  
Sbjct: 128 RDLPQLLNQWNSVVRWELR--TKLFLRTTEFLWQEGHTAHATQEEAEEEARRMAGVYATV 185

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                                              + D       +   T      GA Y
Sbjct: 186 -----------------------------------LRDWCAIPGWEGPKTESEKFAGAVY 210

Query: 476 GPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
              +E +++D  G+  Q  T      N    F+  + +   +  +   +H   +G   R 
Sbjct: 211 SISYEAMMRD--GKALQSCTSHYLGQNFARAFDIQFQDKDQQNKY---VHTTSWGFTTRV 265

Query: 535 IGIMIENFKGN----LPLWLSPIQAIVTTIT-----SSAVEYAQEIANLLKSHHLSIETD 585
           +G ++     +    LP  L+PIQ ++  I       + +  A+ +   LK+  + +  D
Sbjct: 266 VGALVMTHGDDKGLILPPRLAPIQVVIVPIYKAETREAVLPAAERLYQELKAAGIRVHLD 325

Query: 586 FRNE-TINYKIREHSIKKIPIIIICGDKEASERS-IGIRRFGSTTTQKVSLL 635
            R++ +  YK  E  +K +P+ +  G ++    + +   R G   T ++S L
Sbjct: 326 DRDQYSPGYKFNEWELKGVPLRLELGPRDVEAGTAVLASRLGGKETLQISEL 377


>gi|169244471|gb|ACA50509.1| aminoacyl-tRNA synthase [Oryza sativa Japonica Group]
          Length = 510

 Score =  168 bits (426), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 74/434 (17%), Positives = 152/434 (35%), Gaps = 64/434 (14%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
            ++      Y  +++    + ++    ++     D SG         +I++ L  +   +
Sbjct: 22  KKETKLGMAYKKDDNFGEWYSEVVVNSEMIEY-YDISGCYILRPWAMEIWELLKEFFDAE 80

Query: 287 I------KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
           I         +    T  VL     ++  H + +   +  V  +  +  +    A++P +
Sbjct: 81  IKKLKLKPYYFPLFVTENVLQ----KEKDHIEGFAPEVAWVTKSGKSDLEA-PIAIRPTS 135

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQ 399
                  F+  ++S+R+LP+R  ++ +V R E S      +R R F   + H  F TKE+
Sbjct: 136 ETVMYPYFSKWIRSHRDLPLRCNQWCNVVRWEFSNPT-PFIRSREFLWQEGHTAFATKEE 194

Query: 400 MFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSS 459
              E L+I  L   IY++F    +     +  EK  G                       
Sbjct: 195 ADEEVLQILELYRRIYEEFLAVPVSKGRKSEMEKFAGG---------------------- 232

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
                          Y    E  + +  GR  Q  T        ++   F +   ++K  
Sbjct: 233 --------------LYTTSVEAFIPNT-GRGVQGATSHCLGQNFAK--MFDITFENDKGS 275

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWL----SPIQAIVTTITSSAVEY------AQ 569
             M+ +  +    R IG+M+     +  L L    +P+Q IV  +    V+        +
Sbjct: 276 RSMVWQNSWAYTTRSIGVMVMTHGDDKGLVLPPRVAPLQVIVIPVPYKDVDTTAIVNECK 335

Query: 570 EIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
           +    L+   +  + D R N +  +K     +K +P+ I  G K+ +     + R  +  
Sbjct: 336 KTVETLEKAGIRADLDTRANYSPGWKYSHWEMKGVPLRIEIGPKDMANNQARVVRRDNGA 395

Query: 629 TQKVSLLDAIPILT 642
              +   D +  + 
Sbjct: 396 KADIPTADLVEKVN 409


>gi|240144358|ref|ZP_04742959.1| proline--tRNA ligase [Roseburia intestinalis L1-82]
 gi|257203608|gb|EEV01893.1| proline--tRNA ligase [Roseburia intestinalis L1-82]
 gi|291540831|emb|CBL13942.1| prolyl-tRNA synthetase, family I [Roseburia intestinalis XB6B4]
          Length = 479

 Score =  168 bits (426), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 73/427 (17%), Positives = 162/427 (37%), Gaps = 61/427 (14%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEE-INT 296
           +EE   + +  + R+ +L   +    G +     G+ I++ +   + R+ K+   E +  
Sbjct: 14  MEEDFAQWYTDVVRKAELIDYSSVK-GCMILRPAGYAIWENIQHELDRRFKETGVENVYL 72

Query: 297 PQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P  + + L + +  H + +   +  V          R   ++P +       + + ++SY
Sbjct: 73  PLFIPESLLEKEKDHVEGFAPEVAWVTYGGLNQLPER-LCVRPTSETLFCDFYKNIIQSY 131

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISI 414
           R+LP    ++ SV R E        +R R F   + H    T E+     +++ N+    
Sbjct: 132 RDLPKVYNQWCSVVRWEK--ETRPFLRSREFLWQEGHTAHATAEEAEQRTVQMLNVYADF 189

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            ++     ++    T  EK  G++A +                                 
Sbjct: 190 CEEVLAMPVVRGQKTEKEKFAGAEATY--------------------------------- 216

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFN-LPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
                E ++ D  G+  Q GT     N     F   Y +  ++  +   +++  +G   R
Sbjct: 217 ---TIEALMHD--GKALQSGTSHNFGNGFAKAFGIQYTDKDNKLQY---VYQTSWGMTTR 268

Query: 534 FIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDF 586
            IG +I    ++    LP  ++P+QA+V  I       ++ A+E+   +       + D 
Sbjct: 269 LIGAIIMVHGDDSGLVLPPRIAPVQAMVIPIQQQKDGVLDTAKEVCERIGKV-CRAKLDD 327

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERS-IGIRRFGSTTTQKVSLLDAIPILTK-- 643
            +++  +K  E  ++ IP+ I  G K+ +    + +R   +    +++L +    L +  
Sbjct: 328 SDKSPGWKFSEQEMRGIPVRIELGPKDIAAGKCVAVR-RDTREKIEIALDELEAKLPELL 386

Query: 644 ESLPPDC 650
           E +  D 
Sbjct: 387 EQIQKDM 393


>gi|156049881|ref|XP_001590907.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980]
 gi|154693046|gb|EDN92784.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 576

 Score =  168 bits (426), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 80/432 (18%), Positives = 161/432 (37%), Gaps = 64/432 (14%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
              E   + ++++  + ++     + SG      +   I+  + ++ + +I+  D EE +
Sbjct: 59  KKSEDFSQWYQEVVLKAEMIEYYNEISGFFILRPQSMFIWNQIRNWFQAQIETLDVEEAS 118

Query: 296 TPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
            P  L     + +  H + +   +  V  A D   ++   A++P +       ++  ++S
Sbjct: 119 FPMFLSSKSLEKEKDHVEGFAPELAWVTKAGDKDLEV-PVAVRPTSEAVMYPYYSKWIRS 177

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIIS 413
           +R+LP+RL ++ SV R E        +R R F   + H    T+E    E L+I      
Sbjct: 178 HRDLPLRLNQWNSVVRWEAK-QTTPFLRAREFLWQEGHTAHLTEELAGEEVLQILEFYAG 236

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           +Y+      ++    T  EK  G                                     
Sbjct: 237 VYEQLLAVPVVRGRKTEKEKFAGG------------------------------------ 260

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNS---HSEKCHPVMIHRAVFG 529
           +Y    E  +  + GR  Q  T   +  N    F+    +    + EK   + + +  +G
Sbjct: 261 YYTTTVEGYIP-SNGRGIQGATSHCLGQNFSKMFDITVEDPTPKNGEKAGHLHVWQNSWG 319

Query: 530 SIERFIGIMIENFKGNLPLWLSPI----QAIVTTIT--------SSAVEY--AQEIANLL 575
              R IG+M+     +  L L P     QAI+  +           A  Y   Q I + L
Sbjct: 320 LSTRVIGVMVMIHGDDKGLVLPPRIAKLQAIIIPVGITNKTTPEEKAKRYDELQSIKDTL 379

Query: 576 KSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           K   +  + D R+  T  +K  +  +K +P+ +  G ++A++  +   R  +     +S+
Sbjct: 380 KKAGVRADYDIRDGYTPAWKFNDWELKGVPLRLEYGPRDAAQEVVSYARRDTGEKGTISI 439

Query: 635 LDA---IPILTK 643
            +    IP L +
Sbjct: 440 ANLSTEIPALLE 451


>gi|304384417|ref|ZP_07366823.1| proline--tRNA ligase [Prevotella marshii DSM 16973]
 gi|304334515|gb|EFM00802.1| proline--tRNA ligase [Prevotella marshii DSM 16973]
          Length = 493

 Score =  168 bits (426), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 65/433 (15%), Positives = 149/433 (34%), Gaps = 70/433 (16%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
              E+  + +  L  + DL   +     ++     G+ I++ +   + R  K+   +   
Sbjct: 10  KRSENYSQWYNDLVVKADLAEQSAVRGCMVI-KPYGYAIWEKMQQQLDRMFKETGAQNAY 68

Query: 296 TPQVLDQHLW-----------QQSGHWDSYR---ANMFAVKCADDTIKDLRTFALKPMNC 341
            P ++ +              ++      YR   +        D   K      ++P + 
Sbjct: 69  FPLLIPKSFLSREAEHVKGFAKECAVVTHYRLKASEEGNSVVVDPAAKLEEELIIRPTSE 128

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
                 + + + S+R+LP+   ++ +V R E        +R   F   + H   T     
Sbjct: 129 TIIWNTYKNWIHSWRDLPLMCNQWCNVMRWEMR--TRPFLRTSEFLWQEGH---TAHATR 183

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E       ++ +Y  F                                  + +      
Sbjct: 184 EEAEAEARTMLGVYARF--------------------------------AEEWMAVPVIQ 211

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHP 520
            + +      GA      E +++D  G+  Q GT   +  N    F+  ++N  ++   P
Sbjct: 212 GVKSETERFAGALDTYTIEAMMQD--GKALQSGTSHFLGQNFAKSFDVTFLNKENK---P 266

Query: 521 VMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTIT------SSAVEYAQE 570
             +    +G   R IG +I    ++    LP  L+PIQ +V  I       S+  E  + 
Sbjct: 267 EYVWATSWGVSTRLIGALIMTHSDDNGLVLPPKLAPIQVVVIPIARNAEQLSAIDERLRP 326

Query: 571 IANLLKSHHLSIETDF-RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           +   L+   +S++ D   N+   +K  ++ +K +P+ ++ G ++    +I + R  +   
Sbjct: 327 VIEGLRKLGISVKLDDADNKRPGFKFADYELKGVPVRLVMGGRDLENGTIELMRRDTLEK 386

Query: 630 QKVSLLDAIPILT 642
           + + +   +  + 
Sbjct: 387 ETLPIEGIVSHIQ 399


>gi|163814965|ref|ZP_02206352.1| hypothetical protein COPEUT_01115 [Coprococcus eutactus ATCC 27759]
 gi|158449648|gb|EDP26643.1| hypothetical protein COPEUT_01115 [Coprococcus eutactus ATCC 27759]
          Length = 477

 Score =  168 bits (426), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 69/394 (17%), Positives = 142/394 (36%), Gaps = 59/394 (14%)

Query: 270 RKGWKIFQTLISYMRRKIKDDYEE-INTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDT 327
             G+ I++ +   +  + K    E +  P ++ + L + +  H + +   +  V      
Sbjct: 45  PAGYAIWELIQKQLDERFKATGVENVYMPMLIPESLLEKEKDHVEGFAPEVAWVTYGGLN 104

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
               R   ++P +       + + ++SYR+LP    ++ SV R E        +R R F 
Sbjct: 105 PLTER-MCVRPTSETLFCDFYKNDIQSYRDLPKVYNQWCSVMRWEK--ETRPFLRSREFL 161

Query: 388 QDDA-HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
             +      T E+     +++ NL     +D     ++    T  EK  G++A +     
Sbjct: 162 WQEGHTAHATAEEAEARTIQMLNLYADFCEDVLAMPVIRGQKTEKEKFAGAEATY----- 216

Query: 447 IMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSR 505
                                            E ++ D  G+  Q GT           
Sbjct: 217 -------------------------------TIEALMHD--GKALQSGTSHNFGDGFAKA 243

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTIT 561
           F   + +  ++  +   +H+  +G   R IG +I     N    LP  ++P Q ++  I 
Sbjct: 244 FGIQFTDKDNKLKY---VHQTSWGMTTRLIGAIIMVHGDNSGLVLPPKVAPTQVMIIPIM 300

Query: 562 SS---AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERS 618
                 +E A E+   L +    ++ D  +++  +K  E  ++ IPI +  G K+     
Sbjct: 301 QKKAGVLEKAAELREKLGA--FRVKVDDSDKSPGWKFSEQEMRGIPIRVEIGPKDIEANQ 358

Query: 619 IGIRRFGSTTTQKVSLLDAIPILTK--ESLPPDC 650
             + R  +     VSL +    + +  E++  D 
Sbjct: 359 AVLVRRDTREKITVSLDEIDAKVGELLETIQKDM 392


>gi|190348971|gb|EDK41532.2| hypothetical protein PGUG_05630 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 685

 Score =  168 bits (425), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 76/413 (18%), Positives = 144/413 (34%), Gaps = 65/413 (15%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ-VLDQHLWQQSGHWDSYRAN 317
            D SG        + +++ +  +   +IK         P  V  + L ++  H + +   
Sbjct: 209 YDVSGCYILRPNSYHVWEQIQDWFNIQIKKLGVRNAYFPMFVSSRVLEKEKDHIEGFAPE 268

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           +  V  A ++  +    A++P +       +   ++S+R+LP++L ++ SV R E     
Sbjct: 269 VAWVTKAGNSELE-EHIAIRPTSETVMYPYYAKWIRSHRDLPLKLNQWNSVVRWEFK-HP 326

Query: 378 HGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
              +R R F   + H    T ++   + +KI +L   IY++     ++    T  EK  G
Sbjct: 327 QPFLRTREFLWQEGHTVHLTDKEADEQVMKILDLYTKIYEELLAVPVVKGKKTENEKFAG 386

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
            +                                    Y    E     A GR  Q  T 
Sbjct: 387 GN------------------------------------YTTTVE-GFIGATGRGIQGATS 409

Query: 497 -QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP--- 552
             +  N    FN    N        V   +  +G   R IG+M+     N  L L P   
Sbjct: 410 HHLGTNFSKMFNITVENPEGADKPKVYGVQTSWGLSTRVIGVMVMTHSDNKGLVLPPRVA 469

Query: 553 -IQAIVTTIT----------SSAVEYAQEIANLLKSHHLSIETDFRN-ETINYKIREHSI 600
             Q +V  +               + A +I   L +  + + +D+R+  T  +K     +
Sbjct: 470 QTQVVVIPVGLTSKTADDERKGINDGAADIEARLNAADVRVTSDYRDTYTSGWKFANWEL 529

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL-------DAIPILTKESL 646
           K +P+ +  G K+ ++  +   R  +     V L        + +  + KE L
Sbjct: 530 KGVPLRVEFGPKDMAQEQVTAVRRDNGEKYTVKLAELETRIPELLETMQKEML 582


>gi|218132749|ref|ZP_03461553.1| hypothetical protein BACPEC_00610 [Bacteroides pectinophilus ATCC
           43243]
 gi|217992475|gb|EEC58478.1| hypothetical protein BACPEC_00610 [Bacteroides pectinophilus ATCC
           43243]
          Length = 477

 Score =  168 bits (425), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 73/427 (17%), Positives = 155/427 (36%), Gaps = 65/427 (15%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
           +EE   + +  + ++ DL   +    G + +   G+ I++ +   + R+ K    + +  
Sbjct: 14  MEEDFAQWYTDVVKKADLMCYSSVK-GCMIFKPDGYAIWENIQHELDRRFKATGVKNVYM 72

Query: 297 PQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P  + + L Q +  H + +   +  V          +   ++P +       + + ++SY
Sbjct: 73  PMFIPESLLQREKDHVEGFAPEVAWVTEGGLQPLQEK-MCVRPTSETLFCDYYKNEIQSY 131

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN-ECLKIHNLIISI 414
           R+LP    ++ SV R E        +R R F   + H      +       ++ NL    
Sbjct: 132 RDLPQLCNQWCSVVRWEK--ETRPFLRSREFLWQEGHTAHATAEEAEARTQQMLNLYADF 189

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            ++     ++    T  EK  G++A +                                 
Sbjct: 190 VEEVLAIPVIKGRKTDKEKFAGAEATY--------------------------------- 216

Query: 475 YGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
                E ++ D  G+  Q GT           F   Y +  ++  +   +H+  +G   R
Sbjct: 217 ---TIEALMHD--GKALQSGTSHNFGDGFAKAFGIQYTDKDNKLKY---VHQTSWGMTTR 268

Query: 534 FIGIMIENFKGN----LPLWLSPIQAIVTTITSS---AVEYAQEIANLLKSHHLSIETDF 586
            IG +I     N    LP  ++P+Q  +  +       ++ A EI  +L +    ++ D 
Sbjct: 269 LIGALIMVHGDNSGLVLPPRIAPVQVCIVPVMQKKPGVLDKAFEIKEVLSN--FRVKVDD 326

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL-------DAIP 639
            +++  +K  E  ++ IP+ I  G ++       + R  +     VSL        + + 
Sbjct: 327 SDKSPGWKFSEQEMRGIPLRIEMGPRDIEANQAVLVRRDNGEKITVSLDEIDVRVGELLE 386

Query: 640 ILTKESL 646
           I+ KE L
Sbjct: 387 IIQKEML 393


>gi|146413278|ref|XP_001482610.1| hypothetical protein PGUG_05630 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 685

 Score =  168 bits (425), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 74/413 (17%), Positives = 143/413 (34%), Gaps = 65/413 (15%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRAN 317
            D SG        + +++ +  +   +IK         P  +   + + +  H + +   
Sbjct: 209 YDVSGCYILRPNSYHVWEQIQDWFNIQIKKLGVRNAYFPMFVSSRVLEKEKDHIEGFAPE 268

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           +  V  A ++  +    A++P +       +   ++S+R+LP++L ++ SV R E     
Sbjct: 269 VAWVTKAGNSELE-EHIAIRPTSETVMYPYYAKWIRSHRDLPLKLNQWNSVVRWEFK-HP 326

Query: 378 HGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
              +R R F   + H    T ++   + +KI +L   IY++     ++    T  EK  G
Sbjct: 327 QPFLRTREFLWQEGHTVHLTDKEADEQVMKILDLYTKIYEELLAVPVVKGKKTENEKFAG 386

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
            +                                    Y    E     A GR  Q  T 
Sbjct: 387 GN------------------------------------YTTTVE-GFIGATGRGIQGATS 409

Query: 497 -QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP--- 552
             +  N    FN    N        V   +  +G   R IG+M+     N  L L P   
Sbjct: 410 HHLGTNFSKMFNITVENPEGADKPKVYGVQTSWGLSTRVIGVMVMTHSDNKGLVLPPRVA 469

Query: 553 -IQAIVTTIT----------SSAVEYAQEIANLLKSHHLSIETDFRN-ETINYKIREHSI 600
             Q +V  +               + A +I   L +  + + +D+R+  T  +K     +
Sbjct: 470 QTQVVVIPVGLTSKTADDERKGINDGAADIEARLNAADVRVTSDYRDTYTSGWKFANWEL 529

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL-------DAIPILTKESL 646
           K +P+ +  G K+ ++  +   R  +     V L        + +  + KE L
Sbjct: 530 KGVPLRVEFGPKDMAQEQVTAVRRDNGEKYTVKLAELETRIPELLETMQKEML 582


>gi|149641567|ref|XP_001511623.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus]
          Length = 1260

 Score =  168 bits (425), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 75/436 (17%), Positives = 143/436 (32%), Gaps = 60/436 (13%)

Query: 226  NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
              +Q         EE+      ++  + ++     D SG        + I++ +  +   
Sbjct: 756  PKKQTRLGLEAKKEENLADWFSQVITKSEMIEY-YDVSGCYILRPWAYSIWEAIKDFFDA 814

Query: 286  KIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPG 343
            +IK    E    P  + Q   + +  H   +   +  V  +  T       A++P +   
Sbjct: 815  EIKKLGVENCYFPMFVSQAALEREKTHIADFAPEVAWVTRSGKTEL-AEPIAVRPTSETV 873

Query: 344  HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFN 402
                +   ++S+R+LP+RL ++ +V R E        +R R F   + H  F T E+   
Sbjct: 874  MYPAYAKWVQSHRDLPIRLNQWCNVVRWEFK-HPQPFLRTREFLWQEGHSAFATYEEAAE 932

Query: 403  ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
            E L+I +L   +Y++     ++    T  EK  G D                        
Sbjct: 933  EVLQILDLYAKVYEELLAIPVVKGRKTEKEKFAGGD------------------------ 968

Query: 463  INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
                        Y    E     A GR  Q  T        S+                 
Sbjct: 969  ------------YTTTVE-AFISASGRAIQGATSHHLGQNFSKMFEIIFEDPKTPGEKQF 1015

Query: 523  IHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTT----------ITSSAVEYA 568
             ++  +G   R IG+M      N+ L L P    +Q +V               + ++  
Sbjct: 1016 AYQNSWGLTTRTIGVMTMVHGDNMGLVLPPRVASVQVVVIPCGITNSLSEEDREALIKKC 1075

Query: 569  QEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERS-IGIRRFGS 626
             E    L S ++ +  D R+  +  +K     +K +PI +  G ++      + +R   +
Sbjct: 1076 NEYRKRLLSANVRVRVDLRDNYSPGWKFNHWELKGVPIRLEVGPRDMKNSQFVAVR-RDT 1134

Query: 627  TTTQKVSLLDAIPILT 642
                 +   +A   L 
Sbjct: 1135 GDKITIVENEAETKLK 1150


>gi|222479210|ref|YP_002565447.1| prolyl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239]
 gi|259511600|sp|B9LUM0|SYP_HALLT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|222452112|gb|ACM56377.1| prolyl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239]
          Length = 491

 Score =  168 bits (425), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 65/388 (16%), Positives = 137/388 (35%), Gaps = 57/388 (14%)

Query: 270 RKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDT 327
            + + +++ L  ++  K KD   +    P  + +   + +    + +   +  V  A + 
Sbjct: 47  PRAYAVWERLQGFLDAKFKDTGVQNAYFPLFIPESYLEREKDIVEGFDPEVAWVTEAGNK 106

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
             + R  A++P +        +  ++S+R+LP+R+ ++ SV R E +       R + F 
Sbjct: 107 ELEER-LAVRPTSESIITPYISQWVRSHRDLPLRVNQWCSVVRWEAT-ETKPFFRTKEFL 164

Query: 388 QDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
             + H    T E  + E +   +   S+Y+D     ++       +K             
Sbjct: 165 WQEGHTAHATHEGAWEETMTRLDQYASVYEDLLAMPVLKGQKPDHDKF------------ 212

Query: 447 IMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI-QVDFNLPSR 505
                                    GA      E ++ D  G+  Q GT   +  +    
Sbjct: 213 ------------------------PGAETTTTVEALMPD--GKSVQAGTSHHLGQSFAEA 246

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL----SPIQAIVTTI- 560
           F+  + +   E+    + H   +G   R +G +I        L L    +P Q +V  I 
Sbjct: 247 FDITFSDEDEEER---IAHTTSWGLSWRALGALIMTHSDEQGLVLPPGVAPEQVVVVPIW 303

Query: 561 ----TSSAVEYAQEIANLLKSHHLSIETDFRNET-INYKIREHSIKKIPIIIICGDKEAS 615
                   +EYA+ +A+ L    + +E D R+     +K  EH +  +P+ I  G  E  
Sbjct: 304 QEDTKDEVLEYAEGVADDLDDAGIRVELDDRDGRNPGFKFNEHELNGVPLRIEIGPHEVE 363

Query: 616 ERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  + +       +        +  +  
Sbjct: 364 DGELTLVHRPDGESVVEDREGVVATVQD 391


>gi|332876867|ref|ZP_08444621.1| proline--tRNA ligase [Capnocytophaga sp. oral taxon 329 str. F0087]
 gi|332685150|gb|EGJ57993.1| proline--tRNA ligase [Capnocytophaga sp. oral taxon 329 str. F0087]
          Length = 492

 Score =  168 bits (425), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 72/442 (16%), Positives = 167/442 (37%), Gaps = 73/442 (16%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
           +++ L    E   + + +L  + DL   +     ++     G+ I++ + + + R  K+ 
Sbjct: 1   MSKNLTSRSEDYSKWYNELVVKADLAESSGVRGCMVI-KPYGYAIWEKMQAELDRMFKET 59

Query: 290 DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCA--------------DDTIKDLRTF 334
            +     P  + +  ++ +  + + +      V                 D   K     
Sbjct: 60  GHTNAYFPIFIPKSYFEAEEKNAEGFAKECAVVTHYRLKTDPNEKGKLIVDPEAKLEEEL 119

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV- 393
            ++P +     + + + ++SYR+LP+ + ++ +V R E        +R   F   + H  
Sbjct: 120 IVRPTSESIIWSTYKNWIQSYRDLPILINQWANVVRWEMR--TRLFLRTAEFLWQEGHTA 177

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
             TKE+   E  ++ N+  +  ++F    ++    T  E+  G+D  +            
Sbjct: 178 HATKEEAIEESERMMNVYANFVENFMAVPVIRGFKTETERFAGADETY------------ 225

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVN 512
                                     E +++D  G+  Q GT   +  N    F+  Y  
Sbjct: 226 ------------------------CIEAMMQD--GKALQAGTSHFLGQNFAKAFDVKYAT 259

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTIT------S 562
              ++ +   +  + +G   R +G +I    ++    LP  L+PIQ ++  I        
Sbjct: 260 KDGKQEY---VWASSWGVSTRLMGALIMTHSDDNGLVLPPNLAPIQVVIVPIYKGAAQLE 316

Query: 563 SAVEYAQEIANLLKSHHLSIETDFRN-ETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
           S  E    +   L+   +S++ D R+ ++  +K  E+ +K +P+ +  G ++    +  +
Sbjct: 317 SVRERISPLMEALRKQGISVKFDDRDTQSPGFKFHEYELKGVPVRLAVGQRDLENNTFEV 376

Query: 622 RRFGSTTTQKVSLLDAIPILTK 643
            R  + T + VS  D I  + +
Sbjct: 377 ARRDTLTKETVSGDDIIAHIAQ 398


>gi|297613111|ref|NP_001066707.2| Os12g0443700 [Oryza sativa Japonica Group]
 gi|77554943|gb|ABA97739.1| Bifunctional aminoacyl-tRNA synthetase, putative, expressed [Oryza
           sativa Japonica Group]
 gi|215697485|dbj|BAG91479.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215740854|dbj|BAG97010.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|218186797|gb|EEC69224.1| hypothetical protein OsI_38226 [Oryza sativa Indica Group]
 gi|222617028|gb|EEE53160.1| hypothetical protein OsJ_35987 [Oryza sativa Japonica Group]
 gi|255670276|dbj|BAF29726.2| Os12g0443700 [Oryza sativa Japonica Group]
          Length = 510

 Score =  168 bits (425), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 74/434 (17%), Positives = 152/434 (35%), Gaps = 64/434 (14%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
            ++      Y  +++    + ++    ++     D SG         +I++ L  +   +
Sbjct: 22  KKETKLGMAYKKDDNFGEWYSEVVVNSEMIEY-YDISGCYILRPWAMEIWELLKEFFDAE 80

Query: 287 I------KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
           I         +    T  VL     ++  H + +   +  V  +  +  +    A++P +
Sbjct: 81  IKKLKLKPYYFPLFVTENVLQ----KEKDHIEGFAPEVAWVTKSGKSDLEA-PIAIRPTS 135

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQ 399
                  F+  ++S+R+LP+R  ++ +V R E S      +R R F   + H  F TKE+
Sbjct: 136 ETVMYPYFSKWIRSHRDLPLRCNQWCNVVRWEFSNPT-PFIRSREFLWQEGHTAFATKEE 194

Query: 400 MFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSS 459
              E L+I  L   IY++F    +     +  EK  G                       
Sbjct: 195 ADEEVLQILELYRRIYEEFLAVPVSKGRKSEMEKFAGG---------------------- 232

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
                          Y    E  + +  GR  Q  T        ++   F +   ++K  
Sbjct: 233 --------------LYTTSVEAFIPNT-GRGVQGATSHCLGQNFAK--MFDITFENDKGS 275

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWL----SPIQAIVTTITSSAVEY------AQ 569
             M+ +  +    R IG+M+     +  L L    +P+Q IV  +    V+        +
Sbjct: 276 RSMVWQNSWAYTTRSIGVMVMTHGDDKGLVLPPRVAPLQVIVIPVPYKDVDTTAIVNECK 335

Query: 570 EIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
           +    L+   +  + D R N +  +K     +K +P+ I  G K+ +     + R  +  
Sbjct: 336 KTVETLEKAGIRADLDTRENYSPGWKYSHWEMKGVPLRIEIGPKDMANNQARVVRRDNGA 395

Query: 629 TQKVSLLDAIPILT 642
              +   D +  + 
Sbjct: 396 KADIPTADLVEKVN 409


>gi|323345462|ref|ZP_08085685.1| proline--tRNA ligase [Prevotella oralis ATCC 33269]
 gi|323093576|gb|EFZ36154.1| proline--tRNA ligase [Prevotella oralis ATCC 33269]
          Length = 493

 Score =  168 bits (425), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 67/434 (15%), Positives = 155/434 (35%), Gaps = 72/434 (16%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
              ++  + +  L  + DL   +     ++     G+ I++ +   + +  K+   +   
Sbjct: 10  KRADNYSQWYNDLVVKADLAEQSAVRGCMVI-KPYGYAIWEKMQQQLDKMFKETGAQNAY 68

Query: 296 TPQVLDQHLW-----------QQSGHWDSYR---ANMFAVKCADDTIKDLRTFALKPMNC 341
            P ++ +              ++      YR   +        D + +      ++P + 
Sbjct: 69  FPLLIPKSFLSREAEHVKGFAKECAVVTHYRLKSSEDGRSVEVDPSARLDEELIIRPTSE 128

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
                 + + + S+R+LP+   ++ +V R E        +R   F   + H   T     
Sbjct: 129 TIIWNTYKNWIHSWRDLPLMCNQWCNVMRWEMR--TRPFLRTSEFLWQEGH---TAHATR 183

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E  +    ++ +Y +F                      W             +      
Sbjct: 184 EEAEEEAQQMLRVYAEFA-------------------EQW-------------MAVPVLQ 211

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHP 520
            + +      GA      E +++D  G+  Q GT   +  N    F+  Y+N  ++   P
Sbjct: 212 GVKSETERFAGALDTYTIEAMMQD--GKALQSGTSHFLGQNFAKSFDVTYLNKENK---P 266

Query: 521 VMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLL- 575
             +    +G   R IG +I    ++    LP  L+PIQ ++  IT   +E  Q I+  L 
Sbjct: 267 EYVWATSWGVSTRLIGALIMTHSDDNGLVLPPRLAPIQVVIIPITKG-IEQLQAISAKLS 325

Query: 576 ------KSHHLSIETDF-RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
                 +   ++++ D   N+   +K  ++ +K +P+ ++ G ++  + +I + R  +  
Sbjct: 326 PIIASLRELGINVKYDDTDNKRPGFKFADYELKGVPVRLVMGGRDLEDNTIEVMRRDTLE 385

Query: 629 TQKVSLLDAIPILT 642
            + VSL   +  + 
Sbjct: 386 KETVSLDGIVDYVK 399


>gi|225028058|ref|ZP_03717250.1| hypothetical protein EUBHAL_02327 [Eubacterium hallii DSM 3353]
 gi|224954658|gb|EEG35867.1| hypothetical protein EUBHAL_02327 [Eubacterium hallii DSM 3353]
          Length = 536

 Score =  168 bits (425), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 79/454 (17%), Positives = 168/454 (37%), Gaps = 59/454 (12%)

Query: 210 GDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWH 269
            +    ML +  G     +++L + +  +++   + +  +  + +L   +     +I   
Sbjct: 44  KNMLDIMLYKKKGNIMAKEKKLVEAITPMDKDFTQWYTDVVTKAELISYSNVRGCMII-R 102

Query: 270 RKGWKIFQTLISYMRRKIKDDYEE-INTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDT 327
            +G+ I++ +   +  + K+   E +  P ++ + L  ++  H + +   +  V    + 
Sbjct: 103 PRGYAIWENIQKQLDARFKETGVENVYLPMLIPESLLQKEKDHVEGFAPEVAWVTHGGEE 162

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
               R   ++P +           + SYR+LPV   ++ SV R E   +    +R   F 
Sbjct: 163 KLAER-LCVRPTSETLFCDHVKDIVHSYRDLPVVYNQWCSVLRWEK--TTRPFLRSSEFL 219

Query: 388 QDDAHVFC-TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
             + H F  T E+      ++ N+     +      ++    T  EK  G++A +     
Sbjct: 220 WQEGHTFHATAEEAKERTEQMLNVYADFCEQVLAIPLVKGRKTEKEKFAGAEATY----- 274

Query: 447 IMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFN-LPSR 505
                                            E ++ D   +  Q GT     N     
Sbjct: 275 -------------------------------TIEALMHDC--KALQSGTSHNFGNGFAKA 301

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI- 560
           F   Y N  ++      ++   +G   R IG +I    ++    LP  ++P+Q ++  I 
Sbjct: 302 FGIEYTNKDNKLS---PVYETSWGMSTRIIGAIIMVHGDDSGLVLPPRIAPVQTMIIPIQ 358

Query: 561 --TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERS 618
                 ++ A EI + LKS+  S++ D  +++  +K  E  I+ IP  I  G K+  +  
Sbjct: 359 QKKDGVLDKAFEIRDTLKSN-FSVKVDDSDKSPGWKFSEQEIQGIPTRIEIGPKDIEKGQ 417

Query: 619 IGIRRFGSTTTQKVSLLDAIPILTK--ESLPPDC 650
             I R  +       +      LT+  E++  D 
Sbjct: 418 AVIVRRDTREKIVTPIDKIPETLTEVLETMQNDM 451


>gi|167747292|ref|ZP_02419419.1| hypothetical protein ANACAC_02006 [Anaerostipes caccae DSM 14662]
 gi|167653270|gb|EDR97399.1| hypothetical protein ANACAC_02006 [Anaerostipes caccae DSM 14662]
          Length = 478

 Score =  168 bits (425), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 74/430 (17%), Positives = 167/430 (38%), Gaps = 57/430 (13%)

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR 284
              +++L + +  ++E   + +  + ++ +L   +    G +     G+ I++ +   M 
Sbjct: 1   MAKEKKLVEAITAMDEDFAQWYTDVVKKAELIEYSSVK-GCMILRPNGYAIWENIQKVMD 59

Query: 285 RKIKDDYEE-INTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
            K K+   E +  P  + + L + +  H + +   +  V    +   + R   ++P +  
Sbjct: 60  AKFKETGVENVAMPMFIPESLLEREKDHVEGFAPEVAWVTHGGNKKLEER-LCVRPTSET 118

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMF 401
                +++ ++SYR+LP    ++ SV R E S      +R   F   + H    T ++  
Sbjct: 119 LFCDFYSNIIQSYRDLPKLYNQWVSVVRWEKS--TRPFLRTSEFYWQEGHTAHATADEAE 176

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
              +++ N+     + +    ++    T  EK  G++A +                    
Sbjct: 177 ERTVQMLNMYADFCEQYLAIPVVKGQKTEKEKFAGANATY-------------------- 216

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHP 520
                             E ++ D  G+  Q GT           F+  Y + +++  + 
Sbjct: 217 ----------------TIEALMHD--GKALQSGTSHNFGDGFAKAFDIQYTDKNNKLQY- 257

Query: 521 VMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIAN 573
             +H+  +G   R IG +I    ++    LP  ++P+Q ++  I       +E A+EI  
Sbjct: 258 --VHQTSWGMSTRIIGAIIMVHGDDSGLVLPPKIAPVQTMIVPIMQKKEGVLEKAEEIRE 315

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            L  +   ++ D  +++  +K  E  ++ IP  I  G K+  +    I R  +     VS
Sbjct: 316 CLSKN-YKVKVDDSDKSPGWKFSEQEVQGIPTRIEIGPKDIEKNQAVIVRRDTREKIFVS 374

Query: 634 LLDAIPILTK 643
           L +    L++
Sbjct: 375 LDEIESKLSE 384


>gi|58264302|ref|XP_569307.1| proline-tRNA ligase [Cryptococcus neoformans var. neoformans JEC21]
 gi|57223957|gb|AAW42000.1| proline-tRNA ligase, putative [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 740

 Score =  168 bits (425), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 67/407 (16%), Positives = 141/407 (34%), Gaps = 59/407 (14%)

Query: 247 RKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ-VLDQHL 304
             L +   L +   D SG        + I+Q + ++   +IK    ++   P  V    L
Sbjct: 252 DVLLKGQMLDY--YDISGCYILRPWSYSIWQIIQNWFDDEIKKLGVQDCYFPMFVSSARL 309

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
            ++  H + +   +  V  A  +  D    A++P +       +   + S+R+LP++L +
Sbjct: 310 EKEKDHIEGFAPEVAWVTKAGSSDLD-EHIAIRPTSETVMYPYYAKWINSHRDLPLKLNQ 368

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           + SV R E        +R R F   + H  F  K     E L I +L   +Y+D     +
Sbjct: 369 WNSVVRWEFKNP-QPFLRTREFLWQEGHTAFLDKADADKEVLDILDLYRKVYEDILAVPV 427

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +    +  EK  G D                                    Y    E  +
Sbjct: 428 IPGKKSEKEKFAGGD------------------------------------YTTTVEGFI 451

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
                      +  +  N    F+    +    +   +  ++  +G   R +G+M+    
Sbjct: 452 PTTGRGIQAATSHHLGQNFSKMFDITVESPDKSQGR-LYAYQNSWGLSTRSLGVMVMVHG 510

Query: 544 GNLPLWLSP----IQAIVTTI--------TSSAVEYAQEIANLLKSHHLSIETDFRNE-T 590
            +  L L P     Q  +  +             +   ++   L +  +  + D R+  T
Sbjct: 511 DDQGLVLPPRVALQQVAIVPVGLSKGEGKNQPIYDACLKLERELVAAGIRAKADLRDGYT 570

Query: 591 INYKIREHSIKKIPIIIICGDKEASER-SIGIRRFGSTTTQKVSLLD 636
             +K  +  ++ +P+ +  G ++ +   ++ +RR+ +  T  + L D
Sbjct: 571 PGWKFNDWEMRGVPLRLELGPRDIANNSTLSVRRYDNHKT-PMPLSD 616


>gi|313237616|emb|CBY12760.1| unnamed protein product [Oikopleura dioica]
          Length = 1692

 Score =  168 bits (425), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 79/401 (19%), Positives = 142/401 (35%), Gaps = 56/401 (13%)

Query: 260  EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD-QHLWQQSGHWDSYRAN 317
             D SG        + I++ +  +    IKD   E    P  +    L ++  H + +   
Sbjct: 1207 YDVSGCYVLLPPSYNIWEHIKDFFDMNIKDLGVENCYFPMFVSQAALEKEKEHIEDFAPE 1266

Query: 318  MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
            +  V  + DT       A++P +      ++    +S+R+LP+++ ++ +V R E     
Sbjct: 1267 VAWVTRSGDTEL-AEPIAIRPTSETVMYPIYAKRCQSHRDLPIKMNQWCNVVRWEFKHPT 1325

Query: 378  HGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
               +R R F   + H  F TK +   E ++I +L   +Y+D      +    T  EK  G
Sbjct: 1326 -PFLRTREFLWQEGHSAFATKAEAEVEVMQILDLYRKVYEDLLAIATVPGRKTVKEKFAG 1384

Query: 437  SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
             D                                    Y    E  +K A GR  Q  T 
Sbjct: 1385 GD------------------------------------YTTTVEAYIK-AAGRAIQGATS 1407

Query: 497  -QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP--- 552
              +  N    FN  + +    K      ++  +G   R IG+MI     +  L + P   
Sbjct: 1408 HHLGQNFSKMFNISFEDESKGKGIKEFAYQNSWGITTRTIGVMIMVHADDKGLVIPPKVS 1467

Query: 553  -IQAIVTT--------ITSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKK 602
              QA++            +      + + N LKS  +    D R++    +K  +  +K 
Sbjct: 1468 RYQAVIVPCGATKTDEDKNKLFNACKALENQLKSFGIRAHADLRDDKKPGWKFNDWELKG 1527

Query: 603  IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +P+ I  G K+    S    R  +      S +  +P + K
Sbjct: 1528 VPLRIEVGPKDLEANSAVFVRRDTLEKVTHSGILTVPFIAK 1568


>gi|295397522|ref|ZP_06807604.1| proline--tRNA ligase [Aerococcus viridans ATCC 11563]
 gi|294974252|gb|EFG49997.1| proline--tRNA ligase [Aerococcus viridans ATCC 11563]
          Length = 502

 Score =  168 bits (424), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 67/429 (15%), Positives = 144/429 (33%), Gaps = 57/429 (13%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
              +        +    + + +  ++ DL         +  +   G+ ++++        
Sbjct: 16  KMAKQEATENLQQTDFSKWYLQAIQQGDLMDYGPARGTM-IFKPDGFLLWESYKDAFNEM 74

Query: 287 IK-DDYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           +K +       P ++ +H ++ ++ H + +   +  V  A +  K     AL+P +    
Sbjct: 75  LKKEGIRNAYFPMLIPKHFFEKEADHVEGFAPELPWVTEAGEE-KLEEPLALRPTSETLF 133

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNE 403
               +  + SYR+LP+ L ++ +V+R E        +R   F   + H     +E+    
Sbjct: 134 GNAMSDWINSYRDLPMELNQWANVFRWEKR--TLPFIRTSEFLWQEGHTAHANEEEARER 191

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            +K+ +    + K+     +     T  E+  G               +DT    +  + 
Sbjct: 192 TMKMLHYYTQLVKEVFAMPVYEGQKTPSERFAG--------------AVDTFSIEAMTKD 237

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
              +  G   +                       +  N    F+  ++N  ++      +
Sbjct: 238 TKAIQAGTSHY-----------------------LGQNFAEAFDIKFLNEDNQ---HTYV 271

Query: 524 HRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTTI-----TSSAVEYAQEIANL 574
           H   +GS  R IG MI        L L P     Q  +  +         +E  QEI   
Sbjct: 272 HTTSWGSSTRLIGAMIMIHGDEQGLVLPPRVAGTQVSLIPVGNIKKNPQVLEKLQEIKAT 331

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           L +  L +  D  N +  YK  E  +  +P+ I  G ++     + I+       +  SL
Sbjct: 332 LSAAGLRVNLDDSNNSPGYKFNESEVHGVPLRIEFGPRDMENNQVMIKMRDVDGKEAFSL 391

Query: 635 L-DAIPILT 642
             D +  + 
Sbjct: 392 DGDLLAEIN 400


>gi|150400672|ref|YP_001324438.1| prolyl-tRNA synthetase [Methanococcus aeolicus Nankai-3]
 gi|171460849|sp|A6UTK4|SYP_META3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|150013375|gb|ABR55826.1| prolyl-tRNA synthetase [Methanococcus aeolicus Nankai-3]
          Length = 456

 Score =  168 bits (424), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 72/414 (17%), Positives = 150/414 (36%), Gaps = 59/414 (14%)

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
              +  +     ++ +     G   +   G+KI +     +R  + + +++E   P ++ 
Sbjct: 5   SEWYHNILETAGIYDLRYPLKGCGVYLPYGFKIRRYAFEAIRDMLDESNHDEALFPMLIP 64

Query: 302 QHLWQQSG-HWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           + L  + G H   +   ++ V     T  D++  AL+P +      +    +K + +LP+
Sbjct: 65  EDLLAKEGEHIKGFEEEVYWVTHGGTTPLDVK-LALRPTSETPIYHMMKLWIKVHTDLPI 123

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRG-FTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDF 418
           ++ +  + +R E       L+R+R   T  +AH    T E+   +     N+  + +   
Sbjct: 124 KIYQIVNSFRYETK-HTRPLIRLREIMTFKEAHTAHSTSEEAEAQVQTALNIYKTFFDRM 182

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           G   I+ +              WD                             GA Y   
Sbjct: 183 GVPTIVSQRPE-----------WDKF--------------------------PGADYTMA 205

Query: 479 FEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           F+ I  D  G+  Q GT+  +  +    F   +      K +    ++  +G  +R I  
Sbjct: 206 FDTIFPD--GKTMQIGTVHNLGQHFAKTFELEFETPEGGKDYA---YQTCYGISDRIIAS 260

Query: 538 MI----ENFKGNLPLWLSPIQAIVTTI-----TSSAVEYAQEIANLLKSHHLSIETDFRN 588
           +I    +     LP  ++P Q I+  +        A+  A+EI   LK+    ++ D R+
Sbjct: 261 IIALHGDEKGLILPPEVAPHQIIIIPLLFKGKEEIAMNKAKEIYKSLKNT-YRVKLDDRD 319

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
                K  +  +K  PI I  G ++     + I R  +    ++   + +  L 
Sbjct: 320 IRPGKKFNDWELKGAPIRIELGPRDIENNKLTIYRRDTGEKFQIDEDNLLNELN 373


>gi|23098021|ref|NP_691487.1| prolyl-tRNA synthetase [Oceanobacillus iheyensis HTE831]
 gi|81846123|sp|Q8ESQ5|SYP_OCEIH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|22776245|dbj|BAC12522.1| prolyl-tRNA synthetase [Oceanobacillus iheyensis HTE831]
          Length = 478

 Score =  168 bits (424), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 68/428 (15%), Positives = 162/428 (37%), Gaps = 57/428 (13%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
             ++  + +  +E+   + +  + ++ DL    +    +I     G+ I++ + + + R 
Sbjct: 4   KNKQFVEKITAMEDDFAQWYTDVVKQADLVDYGQVRGTMII-KPYGYAIWENIKNELDRM 62

Query: 287 IKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
            K+  +  +  P  + + L  ++  H + +   +  V    +     R  A++P +    
Sbjct: 63  FKETGHTNVAFPLFIPESLLQKEKDHVEGFAPEVAWVTHGGEEELTER-IAVRPTSEVLF 121

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNE 403
              +++ + SYR+LP    ++G+V R E   +    +R   F   + H    T E+   E
Sbjct: 122 CDYYSNNIHSYRDLPKLYNQWGNVVRWEK--TTRPFLRSSEFHWQEGHTAHATDEEATEE 179

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             ++      + +++    ++    T  EK  G                           
Sbjct: 180 TNRMLETYAKLVEEYLAVPVLKGRKTDKEKFAG--------------------------- 212

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVM 522
                    A +    E ++ D  G+  Q GT           F+  Y++   +      
Sbjct: 213 ---------AKFTLTIEALMHD--GKALQSGTSHHFGTGFAEAFDINYLDKDGKSQ---F 258

Query: 523 IHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTI---TSSAVEYAQEIANLL 575
           +H+  +G   R +G +I     N    +P  ++P QA++  I       ++ A E+ + L
Sbjct: 259 VHQTSWGLSTRIMGALIMVHGDNRGLVVPPKIAPTQAMIVPIAQHKEGVLDKAYELRDKL 318

Query: 576 KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
            +    ++ D  ++   +K  E+ +K IP+ +  G K+  +  + + R  +   + V + 
Sbjct: 319 -AKVARVDIDGSDKMPGWKFNEYEMKGIPVRVEMGPKDIEKEQVVLVRRDTGEKEFVPVA 377

Query: 636 DAIPILTK 643
           +    L +
Sbjct: 378 EVETRLVE 385


>gi|134107660|ref|XP_777441.1| hypothetical protein CNBB0150 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50260133|gb|EAL22794.1| hypothetical protein CNBB0150 [Cryptococcus neoformans var.
           neoformans B-3501A]
          Length = 740

 Score =  168 bits (424), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 67/407 (16%), Positives = 141/407 (34%), Gaps = 59/407 (14%)

Query: 247 RKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ-VLDQHL 304
             L +   L +   D SG        + I+Q + ++   +IK    ++   P  V    L
Sbjct: 252 DVLLKGQMLDY--YDISGCYILRPWSYSIWQIIQNWFDDEIKKLGVQDCYFPMFVSSARL 309

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
            ++  H + +   +  V  A  +  D    A++P +       +   + S+R+LP++L +
Sbjct: 310 EKEKDHIEGFAPEVAWVTKAGSSDLD-EHIAIRPTSETVMYPYYAKWINSHRDLPLKLNQ 368

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           + SV R E        +R R F   + H  F  K     E L I +L   +Y+D     +
Sbjct: 369 WNSVVRWEFKNP-QPFLRTREFLWQEGHTAFLDKADADKEVLDILDLYRKVYEDILAVPV 427

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +    +  EK  G D                                    Y    E  +
Sbjct: 428 IPGKKSEKEKFAGGD------------------------------------YTTTVEGFI 451

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
                      +  +  N    F+    +    +   +  ++  +G   R +G+M+    
Sbjct: 452 PTTGRGIQAATSHHLGQNFSKMFDITVESPDKSQGR-LYAYQNSWGLSTRSLGVMVMVHG 510

Query: 544 GNLPLWLSP----IQAIVTTI--------TSSAVEYAQEIANLLKSHHLSIETDFRNE-T 590
            +  L L P     Q  +  +             +   ++   L +  +  + D R+  T
Sbjct: 511 DDQGLVLPPRVALQQVAIVPVGLSKGEGKNQPIYDACLKLERELVAAGIRAKADLRDGYT 570

Query: 591 INYKIREHSIKKIPIIIICGDKEASER-SIGIRRFGSTTTQKVSLLD 636
             +K  +  ++ +P+ +  G ++ +   ++ +RR+ +  T  + L D
Sbjct: 571 PGWKFNDWEMRGVPLRLELGPRDIANNSTLSVRRYDNHKT-PMPLSD 616


>gi|326804116|ref|YP_004321934.1| proline--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
 gi|326650465|gb|AEA00648.1| proline--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
          Length = 484

 Score =  168 bits (424), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 73/429 (17%), Positives = 150/429 (34%), Gaps = 58/429 (13%)

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK 288
                  +  E    + + +  ++ DLF        ++F    G+ +++ + +   +K K
Sbjct: 1   MAKETTSHLQENDFSKWYLQSIQKADLFAYGPVRGTMVF-KPNGYALWEKIKTEFDKKFK 59

Query: 289 D-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA 346
               +    P ++ +  ++ ++ H + +   +  V  A D   +    AL+P +      
Sbjct: 60  ASGVKNCYFPMLIPESFFKKEADHVEGFAPELPWVTRAGDEELE-EPVALRPTSETLFGN 118

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECL 405
             +  + SYR+LP+ L ++ +V+R E        +R   F   + H  + ++E+     +
Sbjct: 119 AMSDWINSYRDLPMELNQWANVFRWEKR--TLPFLRTSEFLWQEGHCAYASEEEARERTM 176

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
               +     +D     +     T  EK  G    +                        
Sbjct: 177 HFLKVYQETVEDLLALPVYAGQKTPSEKFAGGVDTYS----------------------- 213

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIH 524
                         E ++KD   +  Q GT      N    F+  Y+N+ ++    V  H
Sbjct: 214 -------------IEAMVKDT--KSVQAGTSHYLGTNFAEAFDIKYLNTENQ---HVYAH 255

Query: 525 RAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTI-----TSSAVEYAQEIANLL 575
            + +G   R IG MI           P  ++PIQ  +  +         +   + I   L
Sbjct: 256 TSSWGVSTRLIGTMIMAHGDEKGVVFPPKMAPIQIALIPVGNVKKNPEVLTRLEAIEKDL 315

Query: 576 KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
           ++   S   D  N +  YK  E  +K +P+ I  G ++       I+       + V+L 
Sbjct: 316 QAAGYSTYLDDSNNSAGYKYNEAEVKGVPLRIEFGPRDMENGQCMIKMRDLEDKEAVNLD 375

Query: 636 DAIPILTKE 644
           D +  +  E
Sbjct: 376 DLLDKVASE 384


>gi|303237443|ref|ZP_07324009.1| proline--tRNA ligase [Prevotella disiens FB035-09AN]
 gi|302482393|gb|EFL45422.1| proline--tRNA ligase [Prevotella disiens FB035-09AN]
          Length = 493

 Score =  168 bits (424), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 71/434 (16%), Positives = 155/434 (35%), Gaps = 70/434 (16%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
              E+  + +  L  + DL   +     ++     G+ I++ + + + +  K+   +   
Sbjct: 10  KRAENYSQWYNDLVIKADLAEQSPVRGCMVI-KPYGYAIWEKMQAQLDKMFKETGAQNAY 68

Query: 296 TPQVLDQHLW-----------QQSGHWDSYR---ANMFAVKCADDTIKDLRTFALKPMNC 341
            P ++ +              ++      YR            D + K      ++P + 
Sbjct: 69  FPLLIPKSFLSREAEHVKGFAKECAVVTHYRLRSNEEGNAVEVDPSAKLEEELIIRPTSE 128

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
                 + + ++SYR+LP+   ++ +V R E        +R   F   + H   T     
Sbjct: 129 TIIWNTYKNWIQSYRDLPLMCNQWCNVMRWEMR--TRPFLRTSEFLWQEGH---TAHATR 183

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E +     ++ +Y DF                      W             +      
Sbjct: 184 EEAVDEAKTMLKVYADFA-------------------EQW-------------LAIPVVQ 211

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHP 520
            + +      GA      E +++D  G+  Q GT   +  N    F+  ++N  ++   P
Sbjct: 212 GVKSENERFAGALDTYTIEAMMQD--GKALQSGTSHFLGQNFAKSFDVTFLNKENK---P 266

Query: 521 VMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVEYA------QE 570
             +    +G   R +G +I    ++    LP  ++PIQ ++  I   A + A      Q 
Sbjct: 267 EYVWATSWGVSTRLVGALIMTHSDDNGLVLPPKIAPIQVVIVPIFKGAEQLAAITEKLQP 326

Query: 571 IANLLKSHHLSIETDF-RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           + N L++  +S++ D   N+   +K  E+ +K +P+ +  G ++    +I I R  +   
Sbjct: 327 VINELRAKGISVKFDNADNKRPGFKFAEYELKGVPVRLAMGGRDLENNTIEIMRRDTLEK 386

Query: 630 QKVSLLDAIPILTK 643
           + VS    +  + K
Sbjct: 387 ENVSFDGIVERIEK 400


>gi|309792694|ref|ZP_07687145.1| prolyl-tRNA synthetase [Oscillochloris trichoides DG6]
 gi|308225243|gb|EFO79020.1| prolyl-tRNA synthetase [Oscillochloris trichoides DG6]
          Length = 480

 Score =  168 bits (424), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 73/410 (17%), Positives = 148/410 (36%), Gaps = 57/410 (13%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
              + +    +   + +  + RE DL  +AE   G I +   GW I++ +   +  +IK+
Sbjct: 1   MPKEVITTRAKDYNQWYLDIVREADLAEVAEVVRGCIVFKPTGWAIWEMMQRALDDRIKE 60

Query: 290 -DYEEINTPQVLDQHL-WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
             +  +  P ++ +    +++ H D +   +  V  A         + ++P +       
Sbjct: 61  TGHSNVQFPLLIPKSFIMKEAEHVDGFAPEVAEVTRAGGEDL-TEPYVIRPTSETIIGHF 119

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
           ++  ++SYR+LP+   ++ +V R E        +R   F   + H     E       + 
Sbjct: 120 YSKWIRSYRDLPLLYNQWCNVMRWEMR--TRPFLRTSEFIWQEGHTAHVNEAEAEA--ET 175

Query: 408 HNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGV 467
             ++  +Y DF                                    +       + T  
Sbjct: 176 LKILHEVYADF--------------------------------AEQVMAVPVIRGLKTEN 203

Query: 468 LLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
               GA      E +++D  GR  Q GT   +  N    F   Y + ++   H       
Sbjct: 204 EKFPGALRSYCIEAMMQD--GRALQAGTSHNLGQNFAKAFEITYTDHNNTVQHA---WTT 258

Query: 527 VFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHL-- 580
            +G   R IG +I    ++    +P  L+PIQ +V  I  +  E  +++   + +     
Sbjct: 259 SWGVSTRLIGALIMTHSDDEGLVIPPRLAPIQVVVVPIFKNDAER-EKVMATVHALTSTW 317

Query: 581 ----SIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
                 + D R+  +  +K  E  +K +P+ I  G K+  + S+ I R  
Sbjct: 318 KGVLRFKIDDRDNLSPGFKFNEWEMKGVPVRIEVGPKDVEKGSVAIARRD 367


>gi|288801214|ref|ZP_06406669.1| proline--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039]
 gi|288331825|gb|EFC70308.1| proline--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039]
          Length = 493

 Score =  168 bits (424), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 68/402 (16%), Positives = 148/402 (36%), Gaps = 71/402 (17%)

Query: 270 RKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLW-----------QQSGHWDSYR-- 315
             G+ I++ +   + +  K+   +    P ++ +              ++      YR  
Sbjct: 42  PYGYAIWEKMQQQLDKMFKETGAQNAYFPLLIPKSFLSREAEHVEGFAKECAVVTHYRLK 101

Query: 316 -ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
            +   A    D + +      ++P +       + + +KS+R+LP+   ++ +V R E  
Sbjct: 102 NSESGAGVVVDPSARLEEELIIRPTSETIIWNTYKNWIKSWRDLPLMCNQWCNVMRWEMR 161

Query: 375 GSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
                 +R   F   + H    TKE+   E  K+     S+Y  F               
Sbjct: 162 --TRPFLRTSEFLWQEGHTAHATKEEAVEEARKML----SVYATFA-------------- 201

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
                  W             +       + +      GA      E +++D  G+  Q 
Sbjct: 202 -----EKW-------------MAVPVLQGVKSESEKFAGALDTYTIEAMMQD--GKALQS 241

Query: 494 GTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPL 548
           GT   +  N    F+  ++N  ++  +   +    +G   R IG +I    ++    LP 
Sbjct: 242 GTSHFLGQNFAKSFDVTFLNKENKAEY---VWATSWGVSTRLIGALIMTHSDDNGLVLPP 298

Query: 549 WLSPIQAIVTTIT------SSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIREHSIK 601
            L+PIQ ++  I       S+  E  Q + + L+ + +S++ D   N+   +K  ++ +K
Sbjct: 299 KLAPIQVVIIPIAKGEEQLSAITEKLQPVISKLRENGISVKFDDSDNKRPGFKFADYELK 358

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +P+ ++ G ++    ++ I R  +   + VSL      + +
Sbjct: 359 GVPVRLVMGGRDLESNTVEIMRRDTLEKETVSLNGIAEHIIQ 400


>gi|289642346|ref|ZP_06474494.1| prolyl-tRNA synthetase [Frankia symbiont of Datisca glomerata]
 gi|289507878|gb|EFD28829.1| prolyl-tRNA synthetase [Frankia symbiont of Datisca glomerata]
          Length = 467

 Score =  168 bits (424), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 65/409 (15%), Positives = 155/409 (37%), Gaps = 53/409 (12%)

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
            R ++ +  + +L         ++     G+ I++ + + +  +IK         P  + 
Sbjct: 12  PRWYQDVLAKAELADNGPVRGTMVI-RPYGYAIWERMQADVDARIKATGAVNAYFPLFIP 70

Query: 302 QH-LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  L +++ H + +   +  V        +     ++P +            +SYR+LP+
Sbjct: 71  ESYLRREAQHVEGFSPELAVVTHGGGKELE-EPVVVRPTSETVIGEYMAKWTQSYRDLPL 129

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
            L ++ +V R E    L   +R   F   + H     +       +  +L   +Y++F  
Sbjct: 130 LLNQWANVVRWELRPRL--FLRTSEFLWQEGHTAHVDQADAAAYARRIHL--EVYREF-- 183

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
                                    +++   +   + ++++R         GA      E
Sbjct: 184 -----------------------MTSVLALPVLVGRKTAKERF-------AGAINTLTLE 213

Query: 481 YILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
            ++ D  G+  Q  T   +  N    F+  ++ +  ++    +     +GS  R IG +I
Sbjct: 214 AMMGD--GKALQMATSHELGQNFARAFDIDFLGADGQRH---LAWTTSWGSSTRMIGGLI 268

Query: 540 ----ENFKGNLPLWLSPIQAIVTTITSSA--VEYAQEIANLLKSHHLSIETDFRNE-TIN 592
               ++    +P  L+P+Q IV  +   A  +E   +I   L++  + ++ D R   +  
Sbjct: 269 MAHGDDNGLRIPPRLAPVQVIVLPVRDDAALLERVSQITEGLQAAGVRVQLDARPGLSFG 328

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            ++ +  +K IP+ +  G ++ +  SI + R  ++    V L D +  +
Sbjct: 329 RRVTDAELKGIPVRVEIGPRDLAAGSITLARRDTSEKITVPLDDVLARV 377


>gi|258512352|ref|YP_003185786.1| prolyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257479078|gb|ACV59397.1| prolyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 483

 Score =  168 bits (424), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 73/429 (17%), Positives = 161/429 (37%), Gaps = 61/429 (14%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
             E   R +  + ++ +    A     ++      ++I++     + R+ K   +     
Sbjct: 15  QSEDFSRWYIDVLQKAEWMDYAPVRGCIVI-RPDAYEIWERCQRELDREFKRTGHRNAYF 73

Query: 297 PQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P  + +  ++ +  H + +   +  V  A   I + R  A++P +      ++   ++SY
Sbjct: 74  PLFIPESFFEKEKEHVEGFNPELPWVTEAGGDILEER-LAVRPTSETMFGHMYAQWIQSY 132

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISI 414
           R+LP+ L ++ +V R E        +R   F   + H    T+E+   E +++  +    
Sbjct: 133 RDLPLLLNQWANVVRWEKR--TLPFLRTSEFLWQEGHTAHATEEEAREETMRMLGIYADF 190

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            + F    ++    T  EK  G+   +                                 
Sbjct: 191 VESFLAIPVIRGQKTPSEKFAGAVETY--------------------------------- 217

Query: 475 YGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
                E ++KD  GR  Q  T      N    F   Y++  ++  +   ++   +G   R
Sbjct: 218 ---TIESLMKD--GRALQTATSHYLGQNFAKSFEIQYLDKDNQLKY---VYTTSWGMSTR 269

Query: 534 FIGIMI----ENFKGNLPLWLSPIQAIVTTIT-----SSAVEYAQEIANLLKSHHLSIET 584
            +G ++    ++    LP  LSP Q ++  I       + V  A+E+ + LK   + +  
Sbjct: 270 ILGAIVMVHGDDRGLVLPPKLSPTQVVIVPIGPAKAREAVVAKARELFDALKRADIRVHL 329

Query: 585 DFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           D R++ +  +K  E+ ++ +PI +  G ++       + R  +     V L   I  +  
Sbjct: 330 DDRDDVSPGWKFNEYELRGVPIRLELGPRDLEASQAVLARRDTGEKITVPLDAVIERV-- 387

Query: 644 ESLPPDCQK 652
           ++L  D Q+
Sbjct: 388 QALLSDIQR 396


>gi|225573951|ref|ZP_03782596.1| hypothetical protein RUMHYD_02045 [Blautia hydrogenotrophica DSM
           10507]
 gi|225038789|gb|EEG49035.1| hypothetical protein RUMHYD_02045 [Blautia hydrogenotrophica DSM
           10507]
          Length = 479

 Score =  168 bits (424), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 72/430 (16%), Positives = 157/430 (36%), Gaps = 56/430 (13%)

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR 284
              +++L + +  +EE   + +  + ++ +L         ++     G+ I++ +   + 
Sbjct: 1   MAKEKKLVEAITSMEEDFAQWYTDVVKKAELVDYTSVKGCMVI-KPAGYAIWENIQRELD 59

Query: 285 RKIKDDYEE-INTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
           R+ K+   E +  P  + + L  ++  H + +   +  V          R   ++P +  
Sbjct: 60  RRFKETGVENVYMPLFIPESLLQKEKDHVEGFAPEVAWVTHGGLEELQER-LCVRPTSET 118

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN 402
                +   + S+R+LP    ++ SV R E   +    +R R F   + H      +   
Sbjct: 119 LFCDFYARDIHSHRDLPKVYNQWCSVVRWEK--TTRPFLRSREFLWQEGHTAHATAEEAE 176

Query: 403 -ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
              +++ N+     ++     ++    T  EK  G++A +                    
Sbjct: 177 ERTIQMLNVYADFCEEELAIPVIKGRKTDKEKFAGAEATY-------------------- 216

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHP 520
                             E ++ D  G+  Q GT           F   Y +  +   + 
Sbjct: 217 ----------------TIESLMHD--GKALQSGTSHNFGDGFAKAFGIQYADRDNTLKY- 257

Query: 521 VMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTI---TSSAVEYAQEIAN 573
             +H+  +G   R IG +I     N    LP  ++P+QA++  I       +E A E+  
Sbjct: 258 --VHQTSWGMTTRMIGAIIMVHGDNSGLVLPPRIAPVQAMIIPIQQKKEGVLEKADEMMA 315

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            +K   + ++ D  +++  +K  E  ++ IP+ I CG K+       I R  +     VS
Sbjct: 316 AIKKAGIRVKVDDSDKSPGWKFSEQEMRGIPVRIECGPKDIENGQAVIVRRDTREKIVVS 375

Query: 634 LLDAIPILTK 643
             D    + +
Sbjct: 376 FEDLAQKVQE 385


>gi|150400311|ref|YP_001324078.1| prolyl-tRNA synthetase [Methanococcus vannielii SB]
 gi|171460844|sp|A6USJ4|SYP_METVS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|150013014|gb|ABR55466.1| prolyl-tRNA synthetase [Methanococcus vannielii SB]
          Length = 461

 Score =  167 bits (423), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 78/426 (18%), Positives = 164/426 (38%), Gaps = 61/426 (14%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
                 + ++  +  ++ +     G   +   G+KI +     +R+ + D +++E   P 
Sbjct: 1   MEFSEWYSEILEKAGIYDLRYPIKGCGVYLPYGFKIRRYSFEILRKLLDDTNHDETLFPM 60

Query: 299 VLDQHLWQQSG-HWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           ++ ++L  + G H   +   ++ V     +  +++  AL+P +      +    +K + +
Sbjct: 61  LIPENLLAKEGEHIKGFEDEVYWVTHGGKSPLEIK-LALRPTSETTMYYMMKQWIKVHTD 119

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRG-FTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           LP++L +  + +R E       L+R+R   +  +AH   T     ++C K     I IY 
Sbjct: 120 LPMKLYQVVNTFRYETK-HTRPLIRLREIMSFKEAH---TAHSTQDDCNKQIKEAIEIYG 175

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
            F  E  +  + ++  +       WD                             GA Y 
Sbjct: 176 KFFDEICIPVIISKRPE-------WDKF--------------------------PGADYT 202

Query: 477 PKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
             F+ I  D  G+  Q GT+  +  N    F   +      K +    ++  +G  +R I
Sbjct: 203 MAFDTIFPD--GKTMQIGTVHNLGQNFAKTFELEFETPDGNKDYA---YQTCYGISDRAI 257

Query: 536 GIMI----ENFKGNLPLWLSPIQAIVTTI-----TSSAVEYAQEIANLLKSHHLSIETDF 586
             +I    +     +P+ ++PIQ ++  +         +E  +E++ +LK+    +  D 
Sbjct: 258 ASLIAIHGDEKGLVIPIDVAPIQIVLIPLLFKGKEEIVIEKIKELSKILKTK-YRVHVDD 316

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK-ES 645
           R+     K  +  IK +P+ I  G ++  E    I R  +     V   +A  IL + E 
Sbjct: 317 RDIRPGRKYNDWEIKGVPLRIEIGPRDIEEGKAVIVRRDNGQKMTV---EAFNILNEVEK 373

Query: 646 LPPDCQ 651
              D +
Sbjct: 374 TFEDYK 379


>gi|146302666|ref|YP_001197257.1| prolyl-tRNA synthetase [Flavobacterium johnsoniae UW101]
 gi|259511597|sp|A5FA31|SYP_FLAJ1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|146157084|gb|ABQ07938.1| prolyl-tRNA synthetase [Flavobacterium johnsoniae UW101]
          Length = 492

 Score =  167 bits (423), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 73/451 (16%), Positives = 167/451 (37%), Gaps = 75/451 (16%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
           +++ L    E   + + +L  + DL   +     ++     G+ I++ + + + R  K+ 
Sbjct: 1   MSKNLTTRSEDYSKWYNELVVKADLAENSGVRGCMVI-KPYGYAIWEKMQAELDRMFKET 59

Query: 290 DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCA--------------DDTIKDLRTF 334
            ++    P  + + +++ +  + + +      V                 D   K     
Sbjct: 60  GHQNAYFPLFVPKSMFEAEEKNAEGFAKECAVVTHYRLKNDEDRPGKLMVDPNAKLEEEL 119

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV- 393
            ++P +     + +   ++SYR+LP+ + ++ +V R E        +R   F   + H  
Sbjct: 120 IVRPTSEAIIWSTYKGWVQSYRDLPLLINQWANVVRWEMR--TRLFLRTAEFLWQEGHTA 177

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
             TK++   E  K+ N+     ++F    ++    T  E+  G+D  +            
Sbjct: 178 HATKDEAIEESEKMMNVYADFAENFMAIPVVKGFKTETERFAGADETY------------ 225

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVN 512
                                     E +++D  G+  Q GT   +  N    F+  + N
Sbjct: 226 ------------------------CIEALMQD--GKALQAGTSHFLGQNFAKAFDVKFAN 259

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNL----PLWLSPIQAIVTTITSSAVEYA 568
           +  ++ H   +    +G   R +G +I     +     P  L+PIQ ++  I  +  + A
Sbjct: 260 AEGKQEH---VWGTSWGVSTRLMGALIMTHSDDQGLVLPPNLAPIQVVIVPIHKTDEQLA 316

Query: 569 Q------EIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
           Q      E+   L+   +S++ D R  +   +K  E  +K +P+ I  G K+    +  +
Sbjct: 317 QITAAVNELTAKLRKLKISVKYDDRTTQKPGFKFAEWELKGVPVRIAVGPKDLENGTFEV 376

Query: 622 RRFGSTTTQKVSLLDAIPILTK--ESLPPDC 650
            R  + + + V+    +  +    E +  D 
Sbjct: 377 ARRDNLSKEVVAAEKIVDHVNDLLEQIQKDL 407


>gi|315925309|ref|ZP_07921520.1| proline--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263]
 gi|315621210|gb|EFV01180.1| proline--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263]
          Length = 482

 Score =  167 bits (423), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 67/421 (15%), Positives = 160/421 (38%), Gaps = 57/421 (13%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
            + +  + +   +    R +  +  + ++   A     ++     G+ I++ +     R+
Sbjct: 4   NKGKQVEAITPRDVDFARWYTDVISKTEMVDYAPVKGFMVI-RPYGYAIWENIKEAFDRR 62

Query: 287 IKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
            K+  ++ +  P ++ + + Q ++ H + +   +  V       +     A++P +    
Sbjct: 63  FKETGHKNMYFPLLIPESMLQTEAEHVEGFAPEVAWVT-RGGGKELGERLAIRPTSETII 121

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
            ++++  L SYR+LP +  ++ +V R E   +    +R   F   + H     E+     
Sbjct: 122 CSMYSKWLNSYRQLPFKYNQWCNVVRWEK--TTRPFLRTSEFLWQEGHTLHETEEEARAE 179

Query: 405 -LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            +++ N+   + +DF    ++V   +  EK  G++A +                      
Sbjct: 180 TMQMLNIYREVTEDFMAIPMVVGQKSEKEKFAGAEATY---------------------- 217

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVM 522
                           E ++ D  G+  Q GT      +    F+  Y++  +++ +P  
Sbjct: 218 --------------TIEALMHD--GQALQSGTSHYLGQHFTKAFDISYLSRENKQENPYH 261

Query: 523 IHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIANLL 575
                +G   R IG +I    ++    LP  ++PIQ ++  +        E A ++ + L
Sbjct: 262 ---TSWGVSTRLIGGLIMVHGDDNGLVLPPKIAPIQVVIIPVAAHKPRVAEAAGKLTDQL 318

Query: 576 KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
                  E D  + +  +K  +  +K +PI +  G ++       + R  +     VSL 
Sbjct: 319 GKV-FRAELDDSDNSPGWKFNQWEMKGVPIRLEIGPRDLERGECVLARRDTGEKTAVSLD 377

Query: 636 D 636
           D
Sbjct: 378 D 378


>gi|299140723|ref|ZP_07033861.1| proline--tRNA ligase [Prevotella oris C735]
 gi|298577689|gb|EFI49557.1| proline--tRNA ligase [Prevotella oris C735]
          Length = 493

 Score =  167 bits (423), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 72/434 (16%), Positives = 154/434 (35%), Gaps = 72/434 (16%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
              E+  + +  L  + +L   +     ++     G+ I++ + + + ++ K    +   
Sbjct: 10  KRAENYSQWYNDLVVKAELAEQSPVRGCMVI-KPYGYAIWEKMQAQLDKEFKKTGVQNAY 68

Query: 296 TPQVLDQHLW-----------QQSGHWDSYR---ANMFAVKCADDTIKDLRTFALKPMNC 341
            P ++ +              ++      YR   +        D + K      ++P + 
Sbjct: 69  FPLLIPKSFLSREAEHVKGFAKECAVVTHYRLKSSEEGNSVVVDPSAKLEEELIIRPTSE 128

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQM 400
                 +   + S+R+LP+   ++ +V R E        +R   F   + H    T+E+ 
Sbjct: 129 TIIWNTYKGWIHSWRDLPIMCNQWCNVMRWEMR--TRPFLRTSEFLWQEGHTAHATREEA 186

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQ 460
             E  K+      +Y DF                      W             +     
Sbjct: 187 EVEAQKML----KVYADFA-------------------EKW-------------MAVPVL 210

Query: 461 DRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCH 519
             + +      GA      E +++D  G+  Q GT   +  N    F+  ++N  ++   
Sbjct: 211 QGVKSETERFAGALDTYTIEAMMQD--GKALQSGTSHFLGQNFAKSFDVTFLNKENK--- 265

Query: 520 PVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVEY------AQ 569
           P  +    +G   R +G +I    ++    LP  L+PIQ I+  I     +        Q
Sbjct: 266 PEYVWATSWGVSTRLMGALIMVHSDDNGLVLPPKLAPIQVIIVPIYKGDDQLKAISNKLQ 325

Query: 570 EIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
            + N L+   +S++ D   N+   +K  ++ +K IP+ ++ G ++    +I I R  +  
Sbjct: 326 PVINKLEELGISVKYDDSDNKRPGFKFADYELKGIPVRLVMGGRDLENNTIEIMRRDTLE 385

Query: 629 TQKVSLLDAIPILT 642
            + VS    I  +T
Sbjct: 386 KESVSFDGIIERVT 399


>gi|189499811|ref|YP_001959281.1| prolyl-tRNA synthetase [Chlorobium phaeobacteroides BS1]
 gi|259511582|sp|B3EP23|SYP_CHLPB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|189495252|gb|ACE03800.1| prolyl-tRNA synthetase [Chlorobium phaeobacteroides BS1]
          Length = 481

 Score =  167 bits (423), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 68/416 (16%), Positives = 152/416 (36%), Gaps = 58/416 (13%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
            EE   + +  L R   L   ++    ++     G+ I++ + + +    K   +     
Sbjct: 8   REEDYSQWYIDLVRSAKLADYSDVRGCMVI-RPNGYAIWEKMQAALDGMFKATGHVNAYF 66

Query: 297 PQVLDQH-LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P  + +  + +++ H + +      V          + + ++P +     A +   ++SY
Sbjct: 67  PLFIPESYIQKEADHIEGFAPECAVVTHGGGEELAEKLY-VRPTSETVIWASYKKWIQSY 125

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISI 414
           R+LP+ + ++ +V R E        +R   F   + H    T E+  +E L++ N+  + 
Sbjct: 126 RDLPLLINQWANVVRWEMR--TRLFLRTSEFLWQEGHTAHATPEEAQDEVLRMINVYKTF 183

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            +++    +++   T  EK  G+D  W                                 
Sbjct: 184 AEEYMAMPVLIGRKTDSEKFAGADETW--------------------------------- 210

Query: 475 YGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
                E +++D   +  Q GT   +  N    F+  + + +    +   +    +G   R
Sbjct: 211 ---CIEAMMQD--KKALQAGTSHNLGQNFAKAFDCQFQSKNGTLEY---VWATSWGVSTR 262

Query: 534 FIGIMIENFKGNLPLWLSP----IQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETD 585
            IG +I     +  L L P     Q ++  I      +  E A  +A+ L S+ +    D
Sbjct: 263 LIGALIMAHSDDRGLVLPPKLASRQVVIVPILRGDKQAVAEKAHALADELNSNGIHAFVD 322

Query: 586 FRN-ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
                +  +K  E+ ++ IP+ +  G ++ S       R  +   Q+++L D    
Sbjct: 323 DSEQNSPGWKFAEYELQGIPVRLEIGPRDISSNICIAARRDTGEKQQIALDDTFAA 378


>gi|219851588|ref|YP_002466020.1| prolyl-tRNA synthetase [Methanosphaerula palustris E1-9c]
 gi|219545847|gb|ACL16297.1| prolyl-tRNA synthetase [Methanosphaerula palustris E1-9c]
          Length = 479

 Score =  167 bits (423), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 70/425 (16%), Positives = 151/425 (35%), Gaps = 58/425 (13%)

Query: 228 QQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI 287
           Q E        +E     +  L    ++  +     GV  W   G+ I +   + +R+ +
Sbjct: 2   QTEEETTALPPKEEFSAWYNDLLWRAEIMDVRYPVKGVYVWFPFGFSIRKLTYAILRQLL 61

Query: 288 KDDYEEINTPQVLDQ-HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA 346
             D++E   P ++ +    +++ H   +   ++ V     T  D++  AL+P +      
Sbjct: 62  DKDHQETLFPLLIPEQEFMKEAEHIKGFEEEVYWVTHGGLTELDVK-LALRPTSETAIYP 120

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT-QDDAHVFC-TKEQMFNEC 404
           ++   ++S+ +LP++L +  + +R E       L+R+R  T   +AH    T ++   + 
Sbjct: 121 MYALWVRSHADLPLKLYQIVNTFRYETK-HTRPLIRLREITSFKEAHTVHATWDEAAAQV 179

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
                L  + Y+      ++ +              WD                      
Sbjct: 180 EDALALYTTFYQHLCVPILISRRPE-----------WDKF-------------------- 208

Query: 465 TGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMI 523
                  GA Y    + ++ D  G+  Q GT+  +  +    F+  Y N + E+    + 
Sbjct: 209 ------PGADYTMAVDTVMPD--GKTLQIGTVHHLGDHFSRTFDITYENQNGEQQ---LA 257

Query: 524 HRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT---------SSAVEYAQEIANL 574
           ++  +G  ER I  +I     +  L L P  A V  +             +  A+ I + 
Sbjct: 258 YQTCYGISERCIAALISMHGDDKGLILPPEVAPVQVVVVPIIVGKRRDEVLAAARTIRDQ 317

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           L++  L ++ D R      K     ++ +P+ +  G ++     +      S     +  
Sbjct: 318 LEAAGLRVKLDEREIRPGAKYYHWEMRGVPLRVELGPRDLDNGVVTAVTR-SKEKSTIPA 376

Query: 635 LDAIP 639
              I 
Sbjct: 377 ASLIE 381


>gi|149235762|ref|XP_001523759.1| hypothetical protein LELG_05175 [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146452738|gb|EDK46994.1| hypothetical protein LELG_05175 [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 688

 Score =  167 bits (423), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 77/412 (18%), Positives = 145/412 (35%), Gaps = 60/412 (14%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRAN 317
            D SG        + +++T+  Y   KIK    +    P  + Q + + +  H + +   
Sbjct: 212 YDVSGCYILRPNSYAVWETIQDYFNTKIKALGVQNAYFPMFVSQKVLEKEKDHIEGFAPE 271

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           +  V  A  +  +    A++P +       +   ++S+R+LP++L ++ SV R E     
Sbjct: 272 VAWVTRAGSSELE-EHIAIRPTSETVMYPYYAKWIRSHRDLPIKLNQWNSVVRWEFK-HP 329

Query: 378 HGLMRVRGFTQDDAHVFCT-KEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
              +R R F   + H     K++   E L+I +   +IY++     ++    T  EK  G
Sbjct: 330 QPFLRTREFLWQEGHTAHLYKKEAEEEVLQILDYYAAIYEELLAVPVVKGKKTENEKFAG 389

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
            D                                    Y    E  +  A GR  Q GT 
Sbjct: 390 GD------------------------------------YTTTVEGFIP-ATGRGIQGGTS 412

Query: 497 -QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP--- 552
             +  N    FN    +    +   +  ++  +G   R IG+M+     N  L L P   
Sbjct: 413 HHLGQNFSKMFNMSVESPEGPEKGRLFAYQNSWGLSTRVIGVMVMTHSDNKGLVLPPRVA 472

Query: 553 -IQAIVTTIT----------SSAVEYAQEIANLLKSHHLSIETDFRN-ETINYKIREHSI 600
             Q +V  +               + A +I + LK   + +  D+R+     +K  +  +
Sbjct: 473 QTQVVVIPVGITAKTSAEQREQINKGAADIESRLKKAGIRVTGDYRDSYNPGWKFADWEL 532

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK--ESLPPDC 650
           K +P+ +  G K+     +   R        V L      + +  E +  D 
Sbjct: 533 KGVPLRVEFGPKDLESEQVTAVRRNDGQKLNVKLAGLESSIAEVLEKIQADL 584


>gi|320583690|gb|EFW97903.1| proline--trna ligase, putative [Pichia angusta DL-1]
          Length = 666

 Score =  167 bits (423), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 71/402 (17%), Positives = 137/402 (34%), Gaps = 56/402 (13%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVL--DQHLWQQSGHWDSYRAN 317
            D SG        + I++ +  +   +IK D        +    + L ++  H + +   
Sbjct: 190 YDVSGCYILRPASYAIWEKIQRWFDDRIKADGVSNAYFPMFVSSRVLEKEKDHVEGFAPE 249

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           +  V  A  +  +    A++P +       +   ++S+R+LP++L ++ SV R E     
Sbjct: 250 VAWVTRAGSSDLE-EPIAIRPTSETVMYPYYAKWIRSHRDLPLKLNQWNSVVRWEFK-HP 307

Query: 378 HGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
              +R R F   + H    TKE+   +  KI +L   +Y++                   
Sbjct: 308 QPFLRTREFLWQEGHTAHLTKEEASEQVSKILDLYAGVYEEL------------------ 349

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
                             +       + T      G  Y    E  +           + 
Sbjct: 350 ------------------LAVPVIKGVKTENEKFAGGLYTTTCEGYIPTTGRGIQGATSH 391

Query: 497 QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI--- 553
            +  N    FN    N    +   +  H+  +G   R IG+M+     N  L + P    
Sbjct: 392 HLGQNFSKMFNISVENPLGPEHPKIYAHQTSWGLSTRVIGVMVMIHSDNKGLVIPPRVAQ 451

Query: 554 -QAIVTT----------ITSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIK 601
            Q ++            I +   E   E+ + LK   +   TDFR+  +  +K  +  +K
Sbjct: 452 NQVVIIPVGITNKTTKEIENKLYETCSELNSRLKKADVRTITDFRDNYSPGWKFSDWELK 511

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +P+ +  G K+ +  S+   R  +     +SL      L K
Sbjct: 512 GVPVRLEVGPKDIANNSVMAVRRDNGEKTALSLDTVETELPK 553


>gi|300727040|ref|ZP_07060459.1| proline--tRNA ligase [Prevotella bryantii B14]
 gi|299775584|gb|EFI72175.1| proline--tRNA ligase [Prevotella bryantii B14]
          Length = 493

 Score =  167 bits (422), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 63/434 (14%), Positives = 148/434 (34%), Gaps = 70/434 (16%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEIN 295
              ++  + +  L  + DL        G +     G+ I++ +   + +  K    +   
Sbjct: 10  KRSDNYSQWYNDLVTKADLVE-QAPVRGCMIIKPYGFAIWEKMKEQLDKMFKTKGVQNAY 68

Query: 296 TPQVLDQHLW-QQSGHWDSYRANMFAVKCA-------------DDTIKDLRTFALKPMNC 341
            P ++ +    +++ H   +      V                D   K      ++P + 
Sbjct: 69  FPLLIPKSFLSREAEHVKGFAKECAVVTHYRLKSSEDGNSVEVDSEAKLEEELIIRPTSE 128

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
                 + + + S+R+LP++  ++ +V R E        +R   F   + H   T     
Sbjct: 129 TIIWNTYKNWIHSWRDLPIKCNQWCNVMRWEMR--TRPFLRTSEFLWQEGH---TAHATR 183

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E  K+   ++ +Y DF                                    +      
Sbjct: 184 EEAEKMAQDMLHVYADF--------------------------------AEKYMAVPVIQ 211

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHP 520
            + +      GA      E +++D  G+  Q GT   +  N    F+  Y+   ++   P
Sbjct: 212 GVKSETERFAGALDTYTIEAMMQD--GKALQSGTSHFLGQNFAKSFDVTYLTKENK---P 266

Query: 521 VMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI--TSSAVEYAQE---- 570
             +    +G   R +G +I    ++    LP  L+P+Q ++  I       E   +    
Sbjct: 267 EYVWATSWGVSTRLMGALIMTHSDDNGLVLPPKLAPVQVVIIPIYKNDEQHEQLNQKLQP 326

Query: 571 IANLLKSHHLSIETDF-RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           + + L    +S++ D   N+   +K  ++ +K +P+ ++ G ++    +I + R  +   
Sbjct: 327 VIDQLTELGVSVKYDDADNKRPGFKYADYELKGVPVRLVMGGRDLENNTIEVMRRDTLEK 386

Query: 630 QKVSLLDAIPILTK 643
           + V+    +  +  
Sbjct: 387 ENVTFDGIVERIKN 400


>gi|218661849|ref|ZP_03517779.1| prolyl-tRNA synthetase [Rhizobium etli IE4771]
          Length = 354

 Score =  167 bits (422), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 68/368 (18%), Positives = 122/368 (33%), Gaps = 50/368 (13%)

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
              E++ P +    LWQ+SG +D+Y   M  +K   D     R     P N      +F 
Sbjct: 1   GAIELSMPTLQSAELWQESGRYDAYGKEMLRIKDRQD-----RPMLYGPTNEEMVTDIFR 55

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIH 408
             +KSY++LP+ L      +R+E      G MR R F   DA+ F  T+E   +   K+ 
Sbjct: 56  SSVKSYKDLPLNLYHIQLKFRDEIRPRF-GTMRSREFMMKDAYSFDLTREGAEHSYNKMF 114

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
              +  ++  G   I ++  T P     S         I+    ++     +D +   + 
Sbjct: 115 AAYLRTFERLGLRAIPMRADTGPIGGNLSHEF-----IILADTGESEVFCHKDFVGFDIP 169

Query: 469 LGEGAF----------------YGPKFEYILKDAIG----------RDWQCGTIQV-DFN 501
                F                Y    E   + A            R  + G I      
Sbjct: 170 DERTDFDSVEGLQAIFEKWTSLYAATSEMHDEAAFNAVPESDRLSARGIEVGHIFYFGTK 229

Query: 502 LPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGNLPLWLSPIQAI-VT 558
                 A       ++     +H   +G    R +  +IE +   N  +W + +    + 
Sbjct: 230 YSETMGAKVQGPDGKEH---FVHMGSYGIGPTRLVPAIIEASHDDNGIIWPASVAPFDIV 286

Query: 559 TITSSAVEYAQE-----IANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
            I   A + A +     I   L      +  D  ++    K     +  +P+ II G + 
Sbjct: 287 VINMKAGDQACDDTCELIYAALTKAGKDVLYDDTDDRAGTKFATADLIGVPVQIIAGPRA 346

Query: 614 ASERSIGI 621
            +   + +
Sbjct: 347 VANGEVEV 354


>gi|19074055|ref|NP_584661.1| PROLYL tRNA SYNTHETASE [Encephalitozoon cuniculi GB-M1]
 gi|74621295|sp|Q8SSD7|SYP_ENCCU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|19068697|emb|CAD25165.1| PROLYL tRNA SYNTHETASE [Encephalitozoon cuniculi GB-M1]
          Length = 520

 Score =  167 bits (422), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 76/449 (16%), Positives = 159/449 (35%), Gaps = 59/449 (13%)

Query: 215 PMLSRIYGTAWNTQQELT-QYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGW 273
            +   I      T  +         EE     + ++  + ++        G       G 
Sbjct: 7   KVHINIINYLRPTMDKQKFGLTAKKEEDFSEWYVQVITKGEMIDYYAIK-GCYVMRPLGQ 65

Query: 274 KIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDL 331
            +++ +  +  +KI++   +E   P ++ + + + +  H +++   +  +    + + + 
Sbjct: 66  FVWKCIHKWFTKKIEELGVQECYFPMLVPKSMLEMEKDHVENFSPEVAWITKCGNQVLED 125

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
              A++P +       F+  ++S+R+LP++L ++ SV R E  G+L   +R + F   + 
Sbjct: 126 -PVAVRPTSETIIYPSFSKWIRSHRDLPLKLNQWCSVLRWELHGTL-PFIRGKEFLWQEG 183

Query: 392 HV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKG 450
           H  F T+++   E L I +L   IY +     ++    +  EK                 
Sbjct: 184 HTAFLTRKESDEEVLAILDLYSQIYSELLAVPVIKGRKSENEKF---------------- 227

Query: 451 VLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFY 510
                                GA Y    E  +    GR  Q  T        SR     
Sbjct: 228 --------------------GGADYTTSIEAFIP-GSGRGVQAATSHSLGQNFSRMFDIK 266

Query: 511 VNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTT------- 559
            ++         +++  +G   R IGI       NL L L P     Q ++         
Sbjct: 267 ADTDEGSESSSFVYQNSWGITTRSIGIAAMIHSDNLGLVLPPRVAMTQVVIVPCGITTAS 326

Query: 560 ---ITSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEAS 615
               T S   Y   +   LK+  + +  D R+  T  +K     I+ +P+ +  G K+ +
Sbjct: 327 SKDDTESLRAYINGVCVQLKNSGVRVHLDDRSNVTAGFKFNHWEIRGVPLRLEIGFKDMA 386

Query: 616 ERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
                + R  +   ++VS+      + +E
Sbjct: 387 SSEACLVRRDTRAKKQVSVEGIAHTVMEE 415


>gi|74006042|ref|XP_536120.2| PREDICTED: similar to glutamyl-prolyl tRNA synthetase isoform 1
            [Canis familiaris]
          Length = 1534

 Score =  167 bits (422), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 79/436 (18%), Positives = 155/436 (35%), Gaps = 35/436 (8%)

Query: 226  NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
              +Q         EE+    + ++  + ++     D SG        + I++++  +   
Sbjct: 1005 PKKQTRLGLEAKKEENLADWYSQVITKSEMIEY-YDVSGCYILRPWAYSIWESIKDFFDA 1063

Query: 286  KIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPG 343
            +IK    E    P  + Q   + +  H   +   +  V  +  T       A++P +   
Sbjct: 1064 EIKKLGVENCYFPMFVSQGALEKEKTHVADFAPEVAWVTRSGKTEL-AEPIAVRPTSETV 1122

Query: 344  HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFN 402
                +   ++S+R+LP+RL ++ +V R E        +R R F   + H  F T E+   
Sbjct: 1123 MYPAYAKWVQSHRDLPIRLNQWCNVVRWEFK-HPQPFLRTREFLWQEGHSAFATFEEAAE 1181

Query: 403  ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
            E L+I +L   +Y++     ++    T  EK  G D      E  +      I+   Q  
Sbjct: 1182 EVLQILDLYAKVYEELLAIPVVKGRKTEKEKFAGGDYTTTI-EAFISASGRAIQVPQQ-- 1238

Query: 463  INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
                 +LG      PK++ I     G   Q  T        S+                 
Sbjct: 1239 -----VLGGSHAGSPKWDSIP----GLQDQGATSHHLGQNFSKMFEIIFEDPKTPGEKQF 1289

Query: 523  IHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTT----------ITSSAVEYA 568
             ++  +G   R IG+M      N+ L L P    +Q +V               + +   
Sbjct: 1290 AYQNSWGLTTRTIGVMTMVHGDNMGLVLPPRVASVQVVVIPCGITNALSEEDRDALIIKC 1349

Query: 569  QEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERS-IGIRRFGS 626
             +    L S ++ ++ D R+  +  +K     +K +PI +  G ++      + +R   +
Sbjct: 1350 NDYRRRLLSVNVRVKVDLRDNYSPGWKFNHWELKGVPIRLEVGPRDMKSCQFVAVR-RDT 1408

Query: 627  TTTQKVSLLDAIPILT 642
                 V+  +A   L 
Sbjct: 1409 GEKLTVADNEAETKLK 1424


>gi|237842879|ref|XP_002370737.1| prolyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
 gi|211968401|gb|EEB03597.1| prolyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
 gi|221485712|gb|EEE23993.1| prolyl-tRNA synthetase, putative [Toxoplasma gondii GT1]
 gi|221502920|gb|EEE28630.1| prolyl-tRNA synthetase, putative [Toxoplasma gondii VEG]
          Length = 711

 Score =  167 bits (422), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 69/399 (17%), Positives = 143/399 (35%), Gaps = 57/399 (14%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHLW--QQSGHWDSYRAN 317
            D SG        + I++ +  +   +IK    E +   +        ++  H + +   
Sbjct: 240 YDISGCYIMRPWAFHIWEKVQRFFDDEIKKMGVENSYFPMFVSRHKLEKEKDHVEGFSPE 299

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           +  V    D+    +  A++P +       +   ++S+R+LP++L ++ SV R E     
Sbjct: 300 VAWVTHYGDSPLPEK-IAIRPTSETIMYPAYAKWIRSHRDLPLKLNQWCSVVRWEFKQPT 358

Query: 378 HGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
              +R R F   + H    T+E+ +   L I  L    Y++     ++    +  EK  G
Sbjct: 359 -PFLRTREFLWQEGHTAHATEEEAWELVLDILELYRRWYEECLAVPVIKGEKSEGEKFAG 417

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
                                                      E  + +  GR  Q  T 
Sbjct: 418 GKK------------------------------------TTTVEAFIPE-NGRGIQAATS 440

Query: 497 Q-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP--- 552
             +  N    F   + +    K    ++H+  +G   R +G+MI     +  L + P   
Sbjct: 441 HLLGTNFAKMFEIEFEDEEGHKR---LVHQTSWGCTTRSLGVMIMTHGDDKGLVIPPRVA 497

Query: 553 -IQAIVTTI------TSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIREHSIKKIP 604
            +Q ++  I      T   +   +E+  +L+   + +  D R N T  +K     +K +P
Sbjct: 498 SVQVVIIPILFKDENTGEILGKCRELKTMLEKADIRVRIDDRSNYTPGWKYNHWEVKGVP 557

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           + +  G K+ ++ +  + R  +    ++S  D  P L +
Sbjct: 558 LRLELGPKDLAKGTARVVRRDTGEAYQISWADLAPKLLE 596


>gi|255523430|ref|ZP_05390399.1| prolyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|296184712|ref|ZP_06853123.1| prolyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|255512888|gb|EET89159.1| prolyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|296050494|gb|EFG89917.1| prolyl-tRNA synthetase [Clostridium carboxidivorans P7]
          Length = 478

 Score =  167 bits (422), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 67/423 (15%), Positives = 158/423 (37%), Gaps = 57/423 (13%)

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR 284
               ++L + +  ++E   + +  + ++ +L   +     +I      + +++ +   + 
Sbjct: 1   MEKDKKLVEQITPMDEDFAQWYTDIIKKAELADYSSVRGCMII-RPYAYAMWENIQGDLD 59

Query: 285 RKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
           R+ K+  +E +  P  + + L  ++  H + +   +  V    +     R   ++P +  
Sbjct: 60  RRFKETGHENVYMPMFIPEGLLQKEKDHVEGFAPEVAWVTQGGNEELTER-LCVRPTSET 118

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMF 401
                +   ++SY +LP    ++ SV R E   +    +R   F  ++ H    T+E+  
Sbjct: 119 LFCEHYAKTVQSYNDLPKLYNQWCSVVRWEK--TTRPFLRTTEFLWNEGHTVHATQEESE 176

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E +++ N+     +      ++    T  E+  G                         
Sbjct: 177 EETIRMLNVYADHVEQMLAIPVIRGEKTEKERFAG------------------------- 211

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHP 520
                      A      E ++ D  G+  Q  T      N    FN  Y + + +  + 
Sbjct: 212 -----------AIGTYTIEALMHD--GKALQAATSHNFGTNFAEAFNMQYTDKNGKLQY- 257

Query: 521 VMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIAN 573
             +H+  +G   R IG +I    ++    LP  ++PIQ ++  I       +E A E+  
Sbjct: 258 --VHQTSWGITTRLIGAIIMVHGDDSGLKLPPRIAPIQVVIVPIAQHKEGVLEKAAELKA 315

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            +      ++ D  ++   +K  E+ +K +PI +  G K+  +  + + R  +     VS
Sbjct: 316 RISKI-ARVKVDDSDKMPGWKFAEYEMKGVPIRLEVGPKDIEKNQVVLVRRDNGEKISVS 374

Query: 634 LLD 636
           + +
Sbjct: 375 MDE 377


>gi|281425750|ref|ZP_06256663.1| proline--tRNA ligase [Prevotella oris F0302]
 gi|281400158|gb|EFB30989.1| proline--tRNA ligase [Prevotella oris F0302]
          Length = 493

 Score =  166 bits (421), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 69/434 (15%), Positives = 153/434 (35%), Gaps = 72/434 (16%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
              E+  + +  L  + +L   +     ++     G+ I++ + + + ++ K    +   
Sbjct: 10  KRAENYSQWYNDLVVKAELAEQSPVRGCMVI-KPYGYAIWEKMQAQLDKEFKKTGVQNAY 68

Query: 296 TPQVLDQHLW-----------QQSGHWDSYR---ANMFAVKCADDTIKDLRTFALKPMNC 341
            P ++ +              ++      YR   +        D + K      ++P + 
Sbjct: 69  FPLLIPKSFLSREAEHVKGFAKECAVVTHYRLKSSEEGNSVVVDPSAKLEEELIIRPTSE 128

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQM 400
                 +   + S+R+LP+   ++ +V R E        +R   F   + H    T+E+ 
Sbjct: 129 TIIWNTYKGWIHSWRDLPIMCNQWCNVMRWEMR--TRPFLRTSEFLWQEGHTAHATREEA 186

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQ 460
             E  K+      +Y DF                      W             +     
Sbjct: 187 EVEAQKML----KVYADFA-------------------EKW-------------MAVPVL 210

Query: 461 DRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCH 519
             + +      GA      E +++D  G+  Q GT   +  N    F+  ++N  ++   
Sbjct: 211 QGVKSETERFAGALDTYTIEAMMQD--GKALQSGTSHFLGQNFAKSFDVTFLNKENK--- 265

Query: 520 PVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVEY------AQ 569
           P  +    +G   R +G +I    ++    LP  L+PIQ ++  I     +        Q
Sbjct: 266 PEYVWATSWGVSTRLMGALIMVHSDDNGLVLPPKLAPIQVVIVPIYKGDDQLKAISNKLQ 325

Query: 570 EIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
            + N L+   +S++ D   N+   +K  ++ +K IP+ ++ G ++    +I I R  +  
Sbjct: 326 PVINKLEELGISVKYDDSDNKRPGFKFADYELKGIPVRLVMGGRDLENNTIEIMRRDTLE 385

Query: 629 TQKVSLLDAIPILT 642
            + VS    +  + 
Sbjct: 386 KESVSFDGIVERVK 399


>gi|223461182|gb|AAI41050.1| Glutamyl-prolyl-tRNA synthetase [Mus musculus]
          Length = 1512

 Score =  166 bits (421), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 75/437 (17%), Positives = 147/437 (33%), Gaps = 60/437 (13%)

Query: 226  NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
              +Q         EE+    + ++  + ++     D SG        + I++++  +   
Sbjct: 1008 PKKQTRLGLEAKKEENLAEWYSQVITKSEMIEY-YDVSGCYILRPWSYSIWESIKDFFDA 1066

Query: 286  KIKD-DYEEINTPQVLD-QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPG 343
            +IK    E    P  +    L ++  H + +   +  V  +  T       A++P +   
Sbjct: 1067 EIKKLGVENCYFPIFVSQAALEKEKNHIEDFAPEVAWVTRSGKTEL-AEPIAIRPTSETV 1125

Query: 344  HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFN 402
                +   ++S+R+LPVRL ++ +V R E        +R R F   + H  F T E+  +
Sbjct: 1126 MYPAYAKWVQSHRDLPVRLNQWCNVVRWEFK-HPQPFLRTREFLWQEGHSAFATFEEAAD 1184

Query: 403  ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
            E L+I  L   +Y++     ++    T  EK  G D                        
Sbjct: 1185 EVLQILELYARVYEELLAIPVVRGRKTEKEKFAGGD------------------------ 1220

Query: 463  INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
                        Y    E     A GR  Q  T        S+                 
Sbjct: 1221 ------------YTTTIE-AFISASGRAIQGATSHHLGQNFSKMCEIVFEDPKTPGEKQF 1267

Query: 523  IHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTT----------ITSSAVEYA 568
             ++  +G   R IG+M+     N+ L L P    +Q +V               + +   
Sbjct: 1268 AYQCSWGLTTRTIGVMVMVHGDNMGLVLPPRVASVQVVVIPCGITNALSEEDREALMAKC 1327

Query: 569  QEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERS-IGIRRFGS 626
             E    L   ++ +  D R+  +  +K     +K +P+ +  G ++      + +R   +
Sbjct: 1328 NEYRRRLLGANIRVRVDLRDNYSPGWKFNHWELKGVPVRLEVGPRDMKSCQFVAVR-RDT 1386

Query: 627  TTTQKVSLLDAIPILTK 643
                 ++  +A   L K
Sbjct: 1387 GEKLTIAEKEAEAKLEK 1403


>gi|82617575|ref|NP_084011.1| bifunctional aminoacyl-tRNA synthetase [Mus musculus]
          Length = 1512

 Score =  166 bits (421), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 75/437 (17%), Positives = 147/437 (33%), Gaps = 60/437 (13%)

Query: 226  NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
              +Q         EE+    + ++  + ++     D SG        + I++++  +   
Sbjct: 1008 PKKQTRLGLEAKKEENLAEWYSQVITKSEMIEY-YDVSGCYILRPWSYSIWESIKDFFDA 1066

Query: 286  KIKD-DYEEINTPQVLD-QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPG 343
            +IK    E    P  +    L ++  H + +   +  V  +  T       A++P +   
Sbjct: 1067 EIKKLGVENCYFPIFVSQAALEKEKNHIEDFAPEVAWVTRSGKTEL-AEPIAIRPTSETV 1125

Query: 344  HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFN 402
                +   ++S+R+LPVRL ++ +V R E        +R R F   + H  F T E+  +
Sbjct: 1126 MYPAYAKWVQSHRDLPVRLNQWCNVVRWEFK-HPQPFLRTREFLWQEGHSAFATFEEAAD 1184

Query: 403  ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
            E L+I  L   +Y++     ++    T  EK  G D                        
Sbjct: 1185 EVLQILELYARVYEELLAIPVVRGRKTEKEKFAGGD------------------------ 1220

Query: 463  INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
                        Y    E     A GR  Q  T        S+                 
Sbjct: 1221 ------------YTTTIE-AFISASGRAIQGATSHHLGQNFSKMCEIVFEDPKTPGEKQF 1267

Query: 523  IHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTT----------ITSSAVEYA 568
             ++  +G   R IG+M+     N+ L L P    +Q +V               + +   
Sbjct: 1268 AYQCSWGLTTRTIGVMVMVHGDNMGLVLPPRVASVQVVVIPCGITNALSEEDREALMAKC 1327

Query: 569  QEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERS-IGIRRFGS 626
             E    L   ++ +  D R+  +  +K     +K +P+ +  G ++      + +R   +
Sbjct: 1328 NEYRRRLLGANIRVRVDLRDNYSPGWKFNHWELKGVPVRLEVGPRDMKSCQFVAVR-RDT 1386

Query: 627  TTTQKVSLLDAIPILTK 643
                 ++  +A   L K
Sbjct: 1387 GEKLTIAEKEAEAKLEK 1403


>gi|45358259|ref|NP_987816.1| prolyl-tRNA synthetase [Methanococcus maripaludis S2]
 gi|74579597|sp|Q6LZD3|SYP_METMP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|44921016|emb|CAF30252.1| Prolyl-tRNA synthetase [Methanococcus maripaludis S2]
          Length = 460

 Score =  166 bits (421), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 75/428 (17%), Positives = 158/428 (36%), Gaps = 65/428 (15%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
                 +  +  +  ++ +     G   +   G+KI +     +R+ + +  ++E   P 
Sbjct: 1   MEFSEWYSDILEKAGIYDLRYPIKGCGVYLPYGFKIRRYSFEILRKLLDETGHDETLFPM 60

Query: 299 VLDQHLWQQSG-HWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           ++ ++L  + G H   +   +F V     T  +++  AL+P +      +    +K + +
Sbjct: 61  LIPENLLAKEGEHIKGFEDEVFWVTHGGKTPLEVK-LALRPTSETTMYYMMKQWIKVHTD 119

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRG-FTQDDAHV-FCTKEQMFNECLKIHNLIISIY 415
           LP++L +  + +R E       L+R+R   +  +AH    TK++   +  +   L  + +
Sbjct: 120 LPLKLYQVVNTFRYETK-HTRPLIRLREIMSFKEAHTAHATKKECDAQIEEALTLYKAFF 178

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
            + G   ++ K              WD                             GA Y
Sbjct: 179 DEIGVPYVISKRPE-----------WDKF--------------------------PGADY 201

Query: 476 GPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
              F+ I  D  G+  Q GT+  +  N    F   +     EK     +++  +G  +R 
Sbjct: 202 TMAFDTIYPD--GKTMQIGTVHNLGQNFAKTFELEFETPDGEKD---FVYQTCYGISDRA 256

Query: 535 IGIMIENFKGNLPLWL----SPIQAIVTTI-----TSSAVEYAQEIANLLKSHHLSIETD 585
           I  +I        L +    +PIQ ++  +         ++  +E+ N LKS    +  D
Sbjct: 257 IASLISVHGDEKGLVIPVDVAPIQIVLIPLLFKGKEEIVMDKIKELNNTLKSE-FRVHLD 315

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS---LLDAIPILT 642
            R+     K  +  +K +P+ I  G ++       I R  +     V    +L+ +  + 
Sbjct: 316 DRDIRPGRKYNDWELKGVPLRIELGPRDIENGHALIVRRDTGEKITVEYSNILEEVEKIV 375

Query: 643 ---KESLP 647
              KE+L 
Sbjct: 376 SMYKENLK 383


>gi|194910075|ref|XP_001982069.1| GG12386 [Drosophila erecta]
 gi|190656707|gb|EDV53939.1| GG12386 [Drosophila erecta]
          Length = 1712

 Score =  166 bits (421), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 75/390 (19%), Positives = 139/390 (35%), Gaps = 62/390 (15%)

Query: 273  WKIFQTLISYMRRKIKD-DYEEINTPQ-VLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            + I++ + ++   +I     +E   P  V    L ++  H   +   +  V  + D+   
Sbjct: 1253 FAIWKAIKTWFDAEITRMGVKECYFPIFVSKAVLEKEKTHIADFAPEVAWVTKSGDSDL- 1311

Query: 331  LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
                A++P +       +   ++SYR+LP+RL ++ +V R E        +R R F   +
Sbjct: 1312 AEPIAVRPTSETVMYPAYAKWVQSYRDLPIRLNQWNNVVRWEFKQPT-PFLRTREFLWQE 1370

Query: 391  AHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMK 449
             H  F  KE+   E L I +L   +Y       ++    T  EK  G D           
Sbjct: 1371 GHTAFADKEEAAKEVLDILDLYALVYTHLLAIPVVKGRKTEKEKFAGGD----------- 1419

Query: 450  GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNA 508
                                     Y    E     A GR  Q  T   +  N    F  
Sbjct: 1420 -------------------------YTTTVE-AFISASGRAIQGATSHHLGQNFSKMFEI 1453

Query: 509  FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTTITSSA 564
             Y +  +++     +++  +G   R IG+MI     N  L L P    IQAIV     + 
Sbjct: 1454 VYEDPETQQKK--YVYQNSWGITTRTIGVMIMVHADNQGLVLPPHVACIQAIVVPCGITV 1511

Query: 565  ----------VEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKE 613
                      ++  +++   L    +  E D+R+  +  +K     +K +P+ +  G K+
Sbjct: 1512 NTKDDERAQLLDACKDLEKRLVGGGVRCEGDYRDNYSPGWKFNHWELKGVPLRLEVGPKD 1571

Query: 614  ASERS-IGIRRFGSTTTQKVSLLDAIPILT 642
               +  + +R   +     + L D    + 
Sbjct: 1572 LKAKQLVAVR-RDTGEKITIPLADVEKKIA 1600


>gi|225175968|ref|ZP_03729960.1| prolyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
 gi|225168556|gb|EEG77358.1| prolyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
          Length = 483

 Score =  166 bits (421), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 72/435 (16%), Positives = 160/435 (36%), Gaps = 62/435 (14%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
             +E  + +    E   + +  +  +  +   +     ++     G+ +++ + + +  +
Sbjct: 4   KDKEFVKEITPRAEDYSQWYLDVILKAQMMDYSPVKGCMVI-RPYGFTLWENMQAGLDER 62

Query: 287 IKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           IK   +     P  + + L  +++ H + +   +  V    +     R   ++P +    
Sbjct: 63  IKATGHRNAYFPLFIPESLLQKEADHVEGFAPEVAWVTHGGNEKLSER-LLVRPTSETII 121

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT-KEQMFNE 403
             +F+  ++SYR+LPV + ++ +V R E        +R   F   + H     +E+    
Sbjct: 122 CEMFSRWIQSYRDLPVLMNQWCNVVRWEK--VTRPFLRTSEFLWQEGHTAHRSEEEAEEH 179

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            L++  +     ++     ++    T  EK  G+   +                      
Sbjct: 180 TLRMLEVYRDFVENDLAVPVVKGQKTENEKFAGARETYS--------------------- 218

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVM 522
                           E ++ D  G+  Q GT   +  +    F+  Y++S  E  H   
Sbjct: 219 ---------------IEALMSD--GKALQAGTSHNLGTHFAKVFDITYLDSDGELKH--- 258

Query: 523 IHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTIT-----SSAVEYAQEIAN 573
           + +  +G   R +G +I    ++    LP  ++P Q I+  I         +  A  I  
Sbjct: 259 VWQTSWGVSTRLVGAIIMVHGDDRGLVLPPKVAPTQVILVPIAPKKVREEVLPKAAAIYE 318

Query: 574 LLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
            +K   + IE D R E +  +K  E  +K +P+ I  G ++       + R  +   + V
Sbjct: 319 EIKEAGIRIEMDDREEYSPGWKFNEWEMKGVPLRIEVGPRDLEAGQAVLARRDNGEKETV 378

Query: 633 SLLDA---IPILTKE 644
           ++ D    +PIL  E
Sbjct: 379 AIGDLKARVPILLGE 393


>gi|156742029|ref|YP_001432158.1| prolyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
 gi|259511618|sp|A7NKX0|SYP_ROSCS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|156233357|gb|ABU58140.1| prolyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
          Length = 480

 Score =  166 bits (421), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 73/434 (16%), Positives = 153/434 (35%), Gaps = 61/434 (14%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
              + +    +   + +  + ++ DL   AE   G I +   G+ +++ +   +  +IK 
Sbjct: 1   MPKEGITPRAQDYSQWYLDIVQQADLADYAEVVKGCIVFKPTGYALWEAIQRGLDDRIKA 60

Query: 290 -DYEEINTPQVLDQHL-WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
             +     P ++ +    +++ H + +   +  V  A         + ++P +       
Sbjct: 61  TGHVNAYFPLLIPKSFLMKEAEHVEGFAPEVAEVTRAGGEDL-AEPYVIRPTSETIIGYF 119

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
           ++  ++SYR+LP+ + ++ +V R E        +R   F   + H     E+      + 
Sbjct: 120 YSKWVRSYRDLPLLINQWANVMRWEMR--TRPFLRTTEFLWQEGHTVHATEEDAER--ET 175

Query: 408 HNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGV 467
             ++  +Y DF                                V   +       + +  
Sbjct: 176 LLILHEVYADF--------------------------------VEKDMAIPVIRGLKSEK 203

Query: 468 LLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
               GA      E +++D  GR  Q GT   +  N    F+  Y + H+   +       
Sbjct: 204 EKFPGALRSYCIEAMMQD--GRALQAGTSHNLGQNFARAFDITYTDQHNTIQYA---WTT 258

Query: 527 VFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVEY--AQEIANLLKSHHL 580
            +G   R IG +I    ++    +P  L+P Q +V  I  +  E     E    + +   
Sbjct: 259 SWGVSTRLIGALIMTHSDDEGLVIPPRLAPTQVVVVPIYRNDAERSVVMEAVQRMTAEWK 318

Query: 581 ---SIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS--- 633
                + D R+  T  +K  E  +K +PI +  G K+  + S+ I R      +  S   
Sbjct: 319 GLLRFKVDDRDNLTPGFKFNEWELKGVPIRVEIGPKDIEKGSVAIARRDQPGREGKSFVP 378

Query: 634 ---LLDAIPILTKE 644
              L   +  L +E
Sbjct: 379 QEGLTARLAALLEE 392


>gi|295094342|emb|CBK83433.1| prolyl-tRNA synthetase, family I [Coprococcus sp. ART55/1]
          Length = 477

 Score =  166 bits (421), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 69/394 (17%), Positives = 142/394 (36%), Gaps = 59/394 (14%)

Query: 270 RKGWKIFQTLISYMRRKIKDDYEE-INTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDT 327
             G+ I++ +   +  + K    E +  P ++ + L + +  H + +   +  V      
Sbjct: 45  PAGYAIWELIQKQLDERFKATGVENVYMPMLIPESLLEKEKDHVEGFAPEVAWVTYGGLN 104

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
               R   ++P +       + + ++SYR+LP    ++ SV R E        +R R F 
Sbjct: 105 PLTER-MCVRPTSETLFCDFYKNDIQSYRDLPRVYNQWCSVMRWEK--ETRPFLRSREFL 161

Query: 388 QDDA-HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
             +      T E+     +++ NL     +D     ++    T  EK  G++A +     
Sbjct: 162 WQEGHTAHATAEEAEARTIQMLNLYADFCEDVLAMPVIRGRKTEKEKFAGAEATY----- 216

Query: 447 IMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSR 505
                                            E ++ D  G+  Q GT           
Sbjct: 217 -------------------------------TIEALMHD--GKALQSGTSHNFGDGFAKA 243

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTIT 561
           F   + +  ++  +   +H+  +G   R IG +I     N    LP  ++P Q ++  I 
Sbjct: 244 FGIQFTDKDNKLKY---VHQTSWGMTTRLIGAIIMVHGDNSGLVLPPKVAPTQVMIIPIM 300

Query: 562 SS---AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERS 618
                 +E A E+   L +    ++ D  +++  +K  E  ++ IPI +  G K+     
Sbjct: 301 QKKAGVLEKAAELREKLGA--FRVKVDDSDKSPGWKFSEQEMRGIPIRVEIGPKDIEANQ 358

Query: 619 IGIRRFGSTTTQKVSLLDAIPILTK--ESLPPDC 650
             + R  +     VSL +    + +  E++  D 
Sbjct: 359 AVLVRRDTREKITVSLDEIDTKVGELLETIQKDM 392


>gi|327262448|ref|XP_003216036.1| PREDICTED: bifunctional aminoacyl-tRNA synthetase-like isoform 2
            [Anolis carolinensis]
          Length = 1611

 Score =  166 bits (421), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 75/454 (16%), Positives = 150/454 (33%), Gaps = 60/454 (13%)

Query: 208  WRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIF 267
             +GD++    +         +Q         EE+    + ++  + ++     D SG   
Sbjct: 1089 RQGDNSNLSSNGPGDGQGPKKQTRLGLEAKKEENLADWYSQVITKSEMIEY-YDVSGCYI 1147

Query: 268  WHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD-QHLWQQSGHWDSYRANMFAVKCAD 325
                 + +++ +  +   +IK    E    P  +    L ++  H   +   +  V  + 
Sbjct: 1148 LRPWAFAVWEAIKDFFDSEIKKLGVENCYFPMFVSQAALEKEKTHIADFAPEVAWVTRSG 1207

Query: 326  DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRG 385
             T       A++P +       +   ++S+R+LP++L ++ +V R E        +R R 
Sbjct: 1208 KTEL-AEPIAVRPTSETVMYPAYAKWVQSHRDLPIKLNQWCNVVRWEFK-HPQPFLRTRE 1265

Query: 386  FTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
            F   + H  F T E+   E L+I +L   +Y++     ++    T  EK  G D      
Sbjct: 1266 FLWQEGHTAFATYEEAAEEVLQILDLYARVYEELLAIPVVKGRKTEKEKFAGGD------ 1319

Query: 445  ENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPS 504
                                          Y    E     A GR  Q GT        S
Sbjct: 1320 ------------------------------YTTTVE-AFISASGRAIQGGTSHHLGQNFS 1348

Query: 505  RFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTT- 559
            +                  ++  +G   R IG+M      N+ L L P    +Q ++   
Sbjct: 1349 KMFEIVFEDPRTPGEKQYAYQNSWGLTTRTIGVMTMIHGDNMGLVLPPRVACVQVVIIPC 1408

Query: 560  ---------ITSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIIC 609
                        + +    E    L S ++    D R+  +  +K     +K +PI +  
Sbjct: 1409 GITNTLSEADKEALMTKCSEYRKRLLSANIRSRADLRDNYSPGWKFNHWELKGVPIRLEV 1468

Query: 610  GDKEASERS-IGIRRFGSTTTQKVSLLDAIPILT 642
            G ++      + +R   +      +  +A+  L 
Sbjct: 1469 GPRDMKSNQFVAVR-RDTGEKMTFAENEAVDQLR 1501


>gi|260911765|ref|ZP_05918337.1| proline-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295]
 gi|260634091|gb|EEX52209.1| proline-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295]
          Length = 493

 Score =  166 bits (421), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 60/400 (15%), Positives = 139/400 (34%), Gaps = 69/400 (17%)

Query: 270 RKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCA--- 324
             G+ I++ +   + R  K+   +    P ++ +  + +++ H   +      V      
Sbjct: 42  PYGYAIWEKMQQQLDRMFKETGAQNAYFPLLIPKSFFSREAEHVKGFAKECAVVTHYRLR 101

Query: 325 ----------DDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
                     D + K      ++P +       + + ++S+R+LP+   ++ +V R E  
Sbjct: 102 SSEDGSSVEVDPSAKLEEELIIRPTSETIIWNTYKNWIQSWRDLPLMCNQWCNVMRWEMR 161

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
                 +R   F   + H   T      E  +    ++ +Y  F                
Sbjct: 162 --TRPFLRTSEFLWQEGH---TAHATREEAEEEAKKMLDVYAKF---------------- 200

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
                             + +       + +      GA      E +++D  G+  Q G
Sbjct: 201 ----------------AQEWMAVPVVCGVKSETERFAGALDTYTIEAMMQD--GKALQSG 242

Query: 495 TIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLW 549
           T   +  N    F+  ++N  ++   P  +    +G   R IG +I    ++    LP  
Sbjct: 243 TSHFLGQNFAKSFDVTFLNKENK---PEYVWATSWGVSTRLIGALIMTHSDDNGLVLPPR 299

Query: 550 LSPIQAIVTTITSSAVEY------AQEIANLLKSHHLSIETDFR-NETINYKIREHSIKK 602
           L+PIQ +V  I     +        Q +   L+   ++++ D   N+   +K  ++ +K 
Sbjct: 300 LAPIQVVVIPIGKGDEQMKAIANKLQPVIEQLRKVGVTVKYDDSDNKRPGFKYADYELKG 359

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           IP+ ++ G ++    ++ I R  +   + +        + 
Sbjct: 360 IPVRVVMGGRDLENNTVEIMRRDTLEKETIGFEGLAEHIV 399


>gi|302672266|ref|YP_003832226.1| prolyl-tRNA synthetase ProS [Butyrivibrio proteoclasticus B316]
 gi|302396739|gb|ADL35644.1| prolyl-tRNA synthetase ProS [Butyrivibrio proteoclasticus B316]
          Length = 477

 Score =  166 bits (421), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 69/430 (16%), Positives = 152/430 (35%), Gaps = 58/430 (13%)

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR 284
               ++L   +  ++E   + +  +  + DL   +     ++     G+ I++ +  ++ 
Sbjct: 1   MADNKKLVAEITSMDEDFTQWYTDVCIKADLVSYSNIKGCMVI-KPAGYAIWELIQKHLD 59

Query: 285 RKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
            + K+   +    P  + + L  ++  H + +   +  V          R + ++P +  
Sbjct: 60  ARFKETGVQNAYLPMFIPESLLQKEKDHVEGFAPEVAWVTHGGLEPLTER-YCVRPTSET 118

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMF 401
                +   + SY++LP  L ++ SV R E        +R R F   + H    T E+  
Sbjct: 119 LFCDYYKGEIHSYKDLPQVLNQWCSVVRWEK--ETRPFLRSREFLWQEGHTAHATFEEAE 176

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
               ++ N+     ++     ++    T  EK  G++A +                    
Sbjct: 177 ERTQQMLNVYADFLENDMAIPVIKGQKTEKEKFAGAEATY-------------------- 216

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHP 520
                             E ++ D  GR  Q  T           F   Y    ++  + 
Sbjct: 217 ----------------TVEALMHD--GRALQSATSHNFGDGFAKAFGIQYAGKDNQLHY- 257

Query: 521 VMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTI---TSSAVEYAQEIAN 573
             +++  +G   R IG MI     N    +P  ++PIQ +V  I       +E A +IA 
Sbjct: 258 --VNQTSWGLTTRTIGAMIMVHGDNSGLVVPPKIAPIQVVVIPIQQKKEGVLEAANKIAE 315

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            L      ++ D  + T  +K  E  ++ IP+ +  G K+       + R  +    + +
Sbjct: 316 SL--AGFRVKVDSTDRTPGFKFAEQEMRGIPVRVEIGPKDLEAGKCVLCRRDTREKIECA 373

Query: 634 LLDAIPILTK 643
           + +    + +
Sbjct: 374 IDEVPAKMAE 383


>gi|120437069|ref|YP_862755.1| prolyl-tRNA synthetase [Gramella forsetii KT0803]
 gi|152112923|sp|A0M4Z3|SYP_GRAFK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|117579219|emb|CAL67688.1| prolyl-tRNA synthetase [Gramella forsetii KT0803]
          Length = 492

 Score =  166 bits (421), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 70/435 (16%), Positives = 161/435 (37%), Gaps = 73/435 (16%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
              E   + + +L  + DL   +     ++     G+ I++ + + + R  K+  ++   
Sbjct: 7   KRSEDYSKWYNELVVKADLAENSAVRGCMVI-KPYGYAIWEKMQAELDRMFKETGHQNAY 65

Query: 296 TPQVLDQHLWQ-----------QSGHWDSYRANMFAVK----CADDTIKDLRTFALKPMN 340
            P  + +HL++           +      YR      K      D   K      ++P +
Sbjct: 66  FPLFVPKHLFEAEEKNAEGFAKECAVVTHYRLKNDPDKPGKLMVDPDAKLEEELVVRPTS 125

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQ 399
                  + + ++SYR+LP+++ ++ +V R E        +R   F   + H    TK++
Sbjct: 126 EAIIWNTYKNWIQSYRDLPIKVNQWANVVRWEMR--TRLFLRTAEFLWQEGHTAHATKDE 183

Query: 400 MFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSS 459
              E   ++N+     ++F    ++    T  E+  G+   +                  
Sbjct: 184 ALEETELMNNIYAEFAENFMAMPVVKGSKTESERFAGALETY------------------ 225

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKC 518
                               E +++D  G+  Q GT   +  N    F+  +        
Sbjct: 226 ------------------CIEALMQD--GKALQAGTSHFLGQNFAEAFDVKFATKEGGLE 265

Query: 519 HPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTIT------SSAVEYA 568
           H   +    +G   R +G +I    ++    LP  L+PIQ ++  I           E A
Sbjct: 266 H---VWATSWGVSTRLMGALIMTHSDDNGLVLPPNLAPIQVVIVPIYRSEEQLDQISEVA 322

Query: 569 QEIANLLKSHHLSIETDF-RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGST 627
            E+   L++  +S++ D   N+   +K  ++ ++ +P+ +  G K+  + ++ + R  + 
Sbjct: 323 NELVKELRAVGVSVKFDNNDNQKPGWKFAQYELQGVPLRLAIGPKDLEKGTVELARRDTL 382

Query: 628 TTQKVSLLDAIPILT 642
           T + V+  + +  + 
Sbjct: 383 TKEFVNRSEVVEKIK 397


>gi|258647248|ref|ZP_05734717.1| proline--tRNA ligase [Prevotella tannerae ATCC 51259]
 gi|260852895|gb|EEX72764.1| proline--tRNA ligase [Prevotella tannerae ATCC 51259]
          Length = 494

 Score =  166 bits (421), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 69/439 (15%), Positives = 157/439 (35%), Gaps = 75/439 (17%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
                  R + +L  + +L     D  G +     G+ I++ +   M  + KD   + + 
Sbjct: 10  KRSVDYSRWYNELVVKAELAE-QSDVRGCMVIKPYGYAIWERIQQSMDARFKDVGVQNVY 68

Query: 296 TPQVLDQHLW-QQSGHWDSYRANMFAVKCA-------------DDTIKDLRTFALKPMNC 341
            P ++ +    +++ H + +      V                D   K      ++P + 
Sbjct: 69  FPLLIPKSFLSKEAEHVEGFAKECAVVTHYRLKTNAEKTGVVVDPEAKLDEELIIRPTSE 128

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQM 400
                 +   + S+R+LPV   ++ +V R E        +R   F   + H    T+E+ 
Sbjct: 129 TMFWNTYRKWIHSWRDLPVICNQWCNVMRWEMR--TRLFLRTSEFLWQEGHTAHATREEA 186

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQ 460
                ++ ++     ++     ++  + +  E+  G                        
Sbjct: 187 DQRARQMLDVYADCVENVMAVPVVRGMKSATERFAG------------------------ 222

Query: 461 DRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCH 519
                       A      E +++D  G+  Q GT   +  N    F   YV+  ++  +
Sbjct: 223 ------------AVQTYTIEAMMQD--GKALQNGTSHFLGQNFAKAFGVQYVDKDNQLQY 268

Query: 520 PVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVE------YAQ 569
           P       FG   R +G +I    ++    LP  L+PIQ ++  I  +  E        +
Sbjct: 269 PWA---TSFGVSTRMMGALIMTHSDDNGLVLPPHLAPIQVVIVPIYKNNEELQKLDERLE 325

Query: 570 EIANLLKSHHLSIETDF-RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
            IA+ L+   + ++ D   N+   +K  ++ +K +P+ ++ G ++    +I + R  +  
Sbjct: 326 AIASTLRGKGIRVKYDNADNKRPGFKFADYELKGVPVRLVMGGRDLQNGTIELMRRDTLE 385

Query: 629 TQKV---SLLDAIPILTKE 644
            + +    + + +  L +E
Sbjct: 386 KETLQVEGIEEYVEKLLEE 404


>gi|148681120|gb|EDL13067.1| glutamyl-prolyl-tRNA synthetase [Mus musculus]
          Length = 1468

 Score =  166 bits (421), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 75/437 (17%), Positives = 147/437 (33%), Gaps = 60/437 (13%)

Query: 226  NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
              +Q         EE+    + ++  + ++     D SG        + I++++  +   
Sbjct: 964  PKKQTRLGLEAKKEENLAEWYSQVITKSEMIEY-YDVSGCYILRPWSYSIWESIKDFFDA 1022

Query: 286  KIKD-DYEEINTPQVLD-QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPG 343
            +IK    E    P  +    L ++  H + +   +  V  +  T       A++P +   
Sbjct: 1023 EIKKLGVENCYFPIFVSQAALEKEKNHIEDFAPEVAWVTRSGKTEL-AEPIAIRPTSETV 1081

Query: 344  HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFN 402
                +   ++S+R+LPVRL ++ +V R E        +R R F   + H  F T E+  +
Sbjct: 1082 MYPAYAKWVQSHRDLPVRLNQWCNVVRWEFKHP-QPFLRTREFLWQEGHSAFATFEEAAD 1140

Query: 403  ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
            E L+I  L   +Y++     ++    T  EK  G D                        
Sbjct: 1141 EVLQILELYARVYEELLAIPVVRGRKTEKEKFAGGD------------------------ 1176

Query: 463  INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
                        Y    E     A GR  Q  T        S+                 
Sbjct: 1177 ------------YTTTIE-AFISASGRAIQGATSHHLGQNFSKMCEIVFEDPKTPGEKQF 1223

Query: 523  IHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTT----------ITSSAVEYA 568
             ++  +G   R IG+M+     N+ L L P    +Q +V               + +   
Sbjct: 1224 AYQCSWGLTTRTIGVMVMVHGDNMGLVLPPRVASVQVVVIPCGITNALSEEDREALMAKC 1283

Query: 569  QEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERS-IGIRRFGS 626
             E    L   ++ +  D R+  +  +K     +K +P+ +  G ++      + +R   +
Sbjct: 1284 NEYRRRLLGANIRVRVDLRDNYSPGWKFNHWELKGVPVRLEVGPRDMKSCQFVAVR-RDT 1342

Query: 627  TTTQKVSLLDAIPILTK 643
                 ++  +A   L K
Sbjct: 1343 GEKLTIAEKEAEAKLEK 1359


>gi|295090762|emb|CBK76869.1| prolyl-tRNA synthetase, family I [Clostridium cf. saccharolyticum
           K10]
          Length = 477

 Score =  166 bits (421), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 67/430 (15%), Positives = 161/430 (37%), Gaps = 58/430 (13%)

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR 284
              +++L + +  ++    + +  + ++ +L   +     ++     G+ I++ +   + 
Sbjct: 1   MAKEKKLVEAITSMDVDFAQWYTDVVKKAELVDYSSVKGCMVI-KPDGYAIWENIQKELD 59

Query: 285 RKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
           R+ K+   + +  P  + + L  ++  H + +   +  V          R   ++P +  
Sbjct: 60  RRFKETGVQNVYMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGLEPLQER-MCVRPTSET 118

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN 402
                +   ++SYR+LP    ++ SV R E   +    +R R F   + H      +   
Sbjct: 119 LFCDFYARDIQSYRDLPKLYNQWCSVVRWEK--TTRPFLRSREFLWQEGHTAHATAEEAE 176

Query: 403 ECLK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
           E  + + NL     ++     ++    T  EK  G++A +                    
Sbjct: 177 ERTELMLNLYADFCEEVLAMPVIRGRKTDKEKFAGAEATY-------------------- 216

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHP 520
                             E ++ D  G+  Q GT           F   + +  ++  + 
Sbjct: 217 ----------------TIEALMHD--GKALQSGTSHNFGDGFAKAFGIQFSDKDNKLKY- 257

Query: 521 VMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIAN 573
             +H+  +G   R IG +I    ++    LP  ++P Q ++  I       ++ A E+ +
Sbjct: 258 --VHQTSWGMTTRLIGAIIMVHGDDSGLVLPPRIAPTQVVIVPIRQQAEGVLDKAYELKD 315

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
           +L     S++ D  +++  +K  E  ++ IP+ +  G K+  +    + R  +     VS
Sbjct: 316 ILS--GFSVKVDDSDKSPGWKFSESEMRGIPVRVEIGPKDLEQNQAVLVRRDTHEKITVS 373

Query: 634 LLDAIPILTK 643
           L +    +T+
Sbjct: 374 LDEIKEKVTE 383


>gi|194742728|ref|XP_001953853.1| GF17974 [Drosophila ananassae]
 gi|190626890|gb|EDV42414.1| GF17974 [Drosophila ananassae]
          Length = 1709

 Score =  166 bits (421), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 78/394 (19%), Positives = 141/394 (35%), Gaps = 65/394 (16%)

Query: 273  WKIFQTLISYMRRKIKD-DYEEINTPQ-VLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            + I++ +  +   +I     +E   P  V    L ++  H   +   +  V  + D+   
Sbjct: 1250 FAIWRAIKQWFDAEITRMGVKECYFPIFVSKAVLEKEKTHIADFAPEVAWVTKSGDSDL- 1308

Query: 331  LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
                A++P +       +   ++SYR+LP+RL ++ +V R E        +R R F   +
Sbjct: 1309 AEPIAVRPTSETVMYPAYAKWVQSYRDLPIRLNQWNNVVRWEFKQPT-PFLRTREFLWQE 1367

Query: 391  AHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMK 449
             H  F  KE+   E L I +L   +Y       ++    T  EK  G D           
Sbjct: 1368 GHTAFAGKEEADKEVLDILDLYALVYTHLLAIPVVKGRKTEKEKFAGGD----------- 1416

Query: 450  GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNA 508
                                     Y    E     A GR  Q  T   +  N    F  
Sbjct: 1417 -------------------------YTTTVE-AFISASGRAIQGATSHHLGQNFSKMFEI 1450

Query: 509  FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTTITSSA 564
             Y +  +++     +++  +G   R IG+MI     N  L L P    IQAIV     + 
Sbjct: 1451 VYEDPETQQKK--YVYQNSWGITTRTIGVMIMVHADNQGLVLPPHVACIQAIVVPCGITV 1508

Query: 565  ----------VEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKE 613
                      ++  +++   L    +  E D+R+  +  +K     +K +P+ +  G K+
Sbjct: 1509 NTKDDERAQLLDACKQLEKRLVGAEVRCEGDYRDNYSPGWKFNHWELKGVPLRLEVGPKD 1568

Query: 614  ASERS-IGIRRFGSTTTQKVSLLDA---IPILTK 643
               +  + +R   +     + L D    IP L +
Sbjct: 1569 LKAQQLVAVR-RDTGEKITIPLADVEKKIPALLE 1601


>gi|217967219|ref|YP_002352725.1| prolyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
 gi|217336318|gb|ACK42111.1| prolyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
          Length = 480

 Score =  166 bits (420), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 78/430 (18%), Positives = 160/430 (37%), Gaps = 63/430 (14%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
            +E   + + ++  + DL   +     ++     G+ I++ +   +  KIK+  +     
Sbjct: 12  QKEDFSKWYTEVVLKADLVDYSPVKGCMVI-KPYGYAIWENMQRILDEKIKETGHVNAYF 70

Query: 297 PQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P  + +   + ++ H + +   +  V    D        A++P +     ++++  ++S+
Sbjct: 71  PLFIPKSFLEKEAEHVEGFSPQVAWVTKGGDEDL-FEPLAVRPTSEAIICSMYSKWIQSW 129

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISI 414
           R+LP+ + ++ +V R E        +R   F   + H      E+   E L++ N+    
Sbjct: 130 RDLPILINQWANVVRWEK--ETRPFLRTTEFLWQEGHTAHRTFEEAEEEALRMLNVYKEF 187

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            ++     ++    T  EK  G                                    A 
Sbjct: 188 VENDLAIPVIAGKKTENEKFAG------------------------------------AL 211

Query: 475 YGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           +    E +L D  GR  Q GT   +  +    F+  + +   E+ +   + +  +G   R
Sbjct: 212 HTYSIEVLLAD--GRALQAGTSHNLGQHFAKAFDIMFQDVDGERKY---VWQTSWGVSTR 266

Query: 534 FIGIMIENFKGNLPLWL----SPIQAIVTTI------TSSAVEYAQEIANLLKSHHLSIE 583
            IG +I     +  L L    +P Q ++  I            Y  EI  +LK +   ++
Sbjct: 267 LIGALIMTHGDDYGLVLPPRVAPYQIVIIPIWKNETDKVKVYNYIDEIYEVLKKY-FRVK 325

Query: 584 TDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            D   E T  +K  E  +K +P+ +  G KE  ++ I + R    T   +   + I  L 
Sbjct: 326 VDRDEEHTPGWKFNEWELKGVPVRLEIGPKEVEKQEIYVARRDLRTKISIRRENMIQDL- 384

Query: 643 KESLPPDCQK 652
            E+L  D QK
Sbjct: 385 -ENLLKDIQK 393


>gi|254973701|ref|ZP_05270173.1| prolyl-tRNA synthetase [Clostridium difficile QCD-66c26]
 gi|255091091|ref|ZP_05320569.1| prolyl-tRNA synthetase [Clostridium difficile CIP 107932]
 gi|255312746|ref|ZP_05354329.1| prolyl-tRNA synthetase [Clostridium difficile QCD-76w55]
 gi|255515507|ref|ZP_05383183.1| prolyl-tRNA synthetase [Clostridium difficile QCD-97b34]
 gi|255648599|ref|ZP_05395501.1| prolyl-tRNA synthetase [Clostridium difficile QCD-37x79]
 gi|306518723|ref|ZP_07405070.1| prolyl-tRNA synthetase [Clostridium difficile QCD-32g58]
          Length = 481

 Score =  166 bits (420), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 72/429 (16%), Positives = 163/429 (37%), Gaps = 57/429 (13%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
            +++  + +  +E+   + +  +  + DL   A     ++     G+ +++ +  +M +K
Sbjct: 4   NEKQFVEEITKMEDDFPQWYTDVITKTDLVDYAPVKGFMVV-KPYGYALWEKMQEFMDKK 62

Query: 287 IKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
            K+  ++    P ++ + L  +++ H + +   +  V    +   + R   ++P +    
Sbjct: 63  FKETGHKNCYFPLLIPESLLNKEAEHVEGFAPEVAWVTHGGNKKLEER-LCVRPTSETII 121

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNE 403
             ++   LKSYRELP    ++ SV R E S      +R   F   + H    T E+   E
Sbjct: 122 CTMYAKWLKSYRELPYLYNQWCSVVRWEKS--TRPFLRTSEFLWQEGHTLHETAEEAQEE 179

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            ++   +  ++ ++     ++    +  EK  G +  +                      
Sbjct: 180 TIQQLEVYKALCEELLAMPVVAGQKSESEKFAGGERTY---------------------- 217

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVM 522
                           E ++ D  G+  Q GT   +  +    F+  + +      +P  
Sbjct: 218 --------------TIEAMMHD--GKALQSGTSHFLGQHFTKAFDITFADREGNLANP-- 259

Query: 523 IHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSS---AVEYAQEIANLL 575
            +   +G+  R IG +I    +N    LP  ++PIQ ++  I +     +E   +I   L
Sbjct: 260 -YHTSWGASTRLIGGLIMTHSDNRGLVLPPRVAPIQVVIVPIAAKKGNVMETVDKIYADL 318

Query: 576 KSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           K+  +++E D R+  T  +K  E  +K  P+ +  G K+       + R  +     + L
Sbjct: 319 KTKGVAVEVDDRDNYTTGWKFNEWEMKGAPVRVEIGPKDIENNQAMVFRRDTLEKDSMPL 378

Query: 635 LDAIPILTK 643
                 +  
Sbjct: 379 EGLADAICD 387


>gi|326915112|ref|XP_003203865.1| PREDICTED: bifunctional aminoacyl-tRNA synthetase-like [Meleagris
            gallopavo]
          Length = 1778

 Score =  166 bits (420), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 72/437 (16%), Positives = 146/437 (33%), Gaps = 60/437 (13%)

Query: 226  NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
              +Q         EE+      ++  + ++     D SG          I++ + ++   
Sbjct: 1274 PKKQTRLGLEAKKEENLAEWFSQVITKAEMIEY-YDVSGCYVLRPWAHAIWEAIKNFFDA 1332

Query: 286  KIKD-DYEEINTPQVLD-QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPG 343
            +IK    E    P  +    L ++  H   +   +  V  +  T       A++P +   
Sbjct: 1333 EIKKLGVENCYFPMFVSQAALEKEKSHIADFAPEVAWVTKSGKTEL-AEPIAIRPTSETV 1391

Query: 344  HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFN 402
                +   ++S+R+LP++L ++ +V R E        +R R F   + H  F T E+   
Sbjct: 1392 MYPAYAKWVQSHRDLPIKLNQWCNVVRWEFK-HPQPFLRTREFLWQEGHTAFATYEEAAE 1450

Query: 403  ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
            E ++I +L   +Y+D     ++    T  EK  G D                        
Sbjct: 1451 EVMQILDLYAQVYEDLLAIPVVKGRKTEKEKFAGGD------------------------ 1486

Query: 463  INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
                        Y    E     A GR  Q  T        S+          +      
Sbjct: 1487 ------------YTTTVE-AFISASGRAIQGATSHHLGQNFSKMFEVTFEDPKKPGEKQY 1533

Query: 523  IHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTT----------ITSSAVEYA 568
             ++  +G   R IG+M      N+ L L P    +Q ++               + ++  
Sbjct: 1534 AYQNSWGITTRTIGVMTMIHGDNMGLVLPPRVACVQVVIIPCGITNTLSEEDREALLKKC 1593

Query: 569  QEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERS-IGIRRFGS 626
             E    L + ++ +  D R+  +  +K     +K +P+ +  G ++   +  + +R   +
Sbjct: 1594 NEYLKRLLNANVRVRADLRDNYSPGWKFNHWELKGVPVRLEVGPRDMKSQQFVAVR-RDT 1652

Query: 627  TTTQKVSLLDAIPILTK 643
                  S  +A   L +
Sbjct: 1653 GQKLTFSEHEAEEKLKQ 1669


>gi|256076493|ref|XP_002574546.1| glutamyl-tRNA synthetase cytoplasmic (glutamate--tRNA ligase) (glurs)
            [Schistosoma mansoni]
 gi|238659754|emb|CAZ30779.1| glutamyl-tRNA synthetase, cytoplasmic (glutamate--tRNA ligase)
            (glurs), putative [Schistosoma mansoni]
          Length = 1306

 Score =  166 bits (420), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 92/589 (15%), Positives = 187/589 (31%), Gaps = 80/589 (13%)

Query: 89   WPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA-QIEKKMQEIIARDSPFLKQYLSHEKAR 147
            +    +A G           D      +  +  ++E      +  +     + L+ E+A 
Sbjct: 641  YESACLATGHESPCVLINIPDGSSKDDNAAINFKVESSKSGSVKTNKTVKIENLTPEEAA 700

Query: 148  ELFESKKEAY-----------KVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKK 196
            +  E ++              K +  +S   K   T+              +        
Sbjct: 701  KAAEQQRRKEEKKEARKEGKLKAKQQQSSENKLRTTVVGHETINKPTSDKLMYKQSNQSD 760

Query: 197  FFKLMK----VAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLARE 252
              K  +          + +  +  L ++ GT   ++  +              + +L  +
Sbjct: 761  SVKCEQLKPVSPKVIVKNEKQKESLLKMSGTKKQSKLAIEASKE---TDFSDWYSELIIK 817

Query: 253  MDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQ-QSGH 310
             +L     D SG        + ++Q++  +M  K+K    E    P  + +   + +  H
Sbjct: 818  SELLDY-YDISGCYILRPWAYHMWQSIQCFMDEKLKVMGIENAYFPMFVSKSALEREKNH 876

Query: 311  WDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYR 370
               +   +  V  + DT       A++P +      +F   ++S+R+LP+R+ ++ +V R
Sbjct: 877  VTDFAPEVAWVTKSGDTDL-AEPIAIRPTSETIMYPIFAKWIQSHRDLPLRINQWSNVVR 935

Query: 371  NEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
             E        +R R F   + H  F  K     E   I +L   +Y+             
Sbjct: 936  WEFKHP-QPFLRTREFLWQEGHTAFAEKADAEAEVRVILDLYAEVYEYL----------- 983

Query: 430  RPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGR 489
                                     +         T      GA Y    E  + D  GR
Sbjct: 984  -------------------------LAVPVVKGRKTEREKFAGADYTTTVEIYI-DGNGR 1017

Query: 490  DWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGN 545
              Q  T        SR      + H     P  +++  +G   R +G++I    ++    
Sbjct: 1018 AIQGATSHHLGQNFSRMFDVTYD-HPVTGKPAYVYQNSWGLTTRTLGVLIMVHSDDKGLV 1076

Query: 546  LPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH------------LSIETDFRNE-TIN 592
            LP  ++P Q ++     +A    QE   LL + H              +  D R+  +  
Sbjct: 1077 LPPRVAPYQIVIVPCGITAKTTVQERETLLSAAHSVFELLNKSNKQFRVHCDDRDNVSPG 1136

Query: 593  YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            +K     +K +PI +  G +E ++R + +    +     V +   I  L
Sbjct: 1137 WKFNHWELKGVPIRLEIGPQEVADRKVCLVLRHTGERVNVPMDSLINEL 1185


>gi|256076491|ref|XP_002574545.1| glutamyl-tRNA synthetase cytoplasmic (glutamate--tRNA ligase) (glurs)
            [Schistosoma mansoni]
 gi|238659753|emb|CAZ30778.1| glutamyl-tRNA synthetase, cytoplasmic (glutamate--tRNA ligase)
            (glurs), putative [Schistosoma mansoni]
          Length = 1346

 Score =  166 bits (420), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 92/589 (15%), Positives = 187/589 (31%), Gaps = 80/589 (13%)

Query: 89   WPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA-QIEKKMQEIIARDSPFLKQYLSHEKAR 147
            +    +A G           D      +  +  ++E      +  +     + L+ E+A 
Sbjct: 681  YESACLATGHESPCVLINIPDGSSKDDNAAINFKVESSKSGSVKTNKTVKIENLTPEEAA 740

Query: 148  ELFESKKEAY-----------KVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKK 196
            +  E ++              K +  +S   K   T+              +        
Sbjct: 741  KAAEQQRRKEEKKEARKEGKLKAKQQQSSENKLRTTVVGHETINKPTSDKLMYKQSNQSD 800

Query: 197  FFKLMK----VAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLARE 252
              K  +          + +  +  L ++ GT   ++  +              + +L  +
Sbjct: 801  SVKCEQLKPVSPKVIVKNEKQKESLLKMSGTKKQSKLAIEASKE---TDFSDWYSELIIK 857

Query: 253  MDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQ-QSGH 310
             +L     D SG        + ++Q++  +M  K+K    E    P  + +   + +  H
Sbjct: 858  SELLDY-YDISGCYILRPWAYHMWQSIQCFMDEKLKVMGIENAYFPMFVSKSALEREKNH 916

Query: 311  WDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYR 370
               +   +  V  + DT       A++P +      +F   ++S+R+LP+R+ ++ +V R
Sbjct: 917  VTDFAPEVAWVTKSGDTDL-AEPIAIRPTSETIMYPIFAKWIQSHRDLPLRINQWSNVVR 975

Query: 371  NEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
             E        +R R F   + H  F  K     E   I +L   +Y+             
Sbjct: 976  WEFKHP-QPFLRTREFLWQEGHTAFAEKADAEAEVRVILDLYAEVYEYL----------- 1023

Query: 430  RPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGR 489
                                     +         T      GA Y    E  + D  GR
Sbjct: 1024 -------------------------LAVPVVKGRKTEREKFAGADYTTTVEIYI-DGNGR 1057

Query: 490  DWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGN 545
              Q  T        SR      + H     P  +++  +G   R +G++I    ++    
Sbjct: 1058 AIQGATSHHLGQNFSRMFDVTYD-HPVTGKPAYVYQNSWGLTTRTLGVLIMVHSDDKGLV 1116

Query: 546  LPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH------------LSIETDFRNE-TIN 592
            LP  ++P Q ++     +A    QE   LL + H              +  D R+  +  
Sbjct: 1117 LPPRVAPYQIVIVPCGITAKTTVQERETLLSAAHSVFELLNKSNKQFRVHCDDRDNVSPG 1176

Query: 593  YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            +K     +K +PI +  G +E ++R + +    +     V +   I  L
Sbjct: 1177 WKFNHWELKGVPIRLEIGPQEVADRKVCLVLRHTGERVNVPMDSLINEL 1225


>gi|281420331|ref|ZP_06251330.1| proline--tRNA ligase [Prevotella copri DSM 18205]
 gi|281405633|gb|EFB36313.1| proline--tRNA ligase [Prevotella copri DSM 18205]
          Length = 493

 Score =  166 bits (420), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 66/444 (14%), Positives = 156/444 (35%), Gaps = 74/444 (16%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
              ++  + +  L  + DL  ++     +I     G+ I++ +   + +  K    +   
Sbjct: 10  KRADNYSQWYNDLVVKADLAELSPVRGCMII-KPYGYAIWEKMQQQLDKMFKQTGVQNAY 68

Query: 296 TPQVLDQHLW-QQSGHWDSYRANMFAVKCA-------------DDTIKDLRTFALKPMNC 341
            P ++ +  + +++ H   +      V                D   K      ++P + 
Sbjct: 69  FPLLIPKSFFSREAEHVAGFAKECAVVTHYRLRSTEDGKEVEVDPNAKLDEELIIRPTSE 128

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQM 400
                 + + + S+R+LP+   ++ +V R E        +R   F   + H    TKE+ 
Sbjct: 129 TIIWNTYKNWIHSWRDLPILCNQWCNVMRWEMR--TRPFLRTSEFLWQEGHTAHATKEEA 186

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQ 460
             +  ++  +                                          + +     
Sbjct: 187 EAKAQEMLKVYAEF------------------------------------AENYMGVPVL 210

Query: 461 DRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCH 519
             + +      GA      E +++D  G+  Q GT   +  N    F+  Y+N  ++   
Sbjct: 211 QGVKSETERFAGALNTYTIEAMMQD--GKALQSGTSHFLGQNFAKSFDVTYLNKENK--- 265

Query: 520 PVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVEYAQE----- 570
           P  +    +G   R +G +I    ++    LP  L+PIQ ++  I     + AQ      
Sbjct: 266 PEYVWATSWGVSTRLMGALIMVHSDDNGLVLPPKLAPIQVVIVPINKGDEQLAQITAKLQ 325

Query: 571 -IANLLKSHHLSIETDFRN-ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
            + + L+   ++++ D    +   +K  ++ +K +P+ +  G ++    +I I R  +  
Sbjct: 326 PVIDQLRELGITVKYDDNPAKRPGFKFADYELKGVPVRLAMGGRDLENNTIEIMRRDTLE 385

Query: 629 TQKVSLLDAIPILTKESLPPDCQK 652
            + VS    + ++   ++  D QK
Sbjct: 386 KENVSFDGIVELVK--NMLEDIQK 407


>gi|332799217|ref|YP_004460716.1| Prolyl-tRNA synthetase [Tepidanaerobacter sp. Re1]
 gi|332696952|gb|AEE91409.1| Prolyl-tRNA synthetase [Tepidanaerobacter sp. Re1]
          Length = 478

 Score =  166 bits (420), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 71/413 (17%), Positives = 158/413 (38%), Gaps = 59/413 (14%)

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
            + +  +  + +L   +     ++     G+ +++ +   +  + K   ++    P  + 
Sbjct: 17  SQWYVDVILKAELADYSPVRGCMVI-RPYGYALWENIQQLLDDRFKATGHKNAYFPLFIP 75

Query: 302 QHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           + L  +++ H + +   +  V    +     R  A++P +      +++  +KS+R+LPV
Sbjct: 76  ESLLQKEAEHVEGFAPEVAWVTHGGNEKLAER-LAVRPTSETIICNMYSKWIKSWRDLPV 134

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKDFG 419
            + ++ +V R E S      +R   F   + H    TKE    E L++  +     +   
Sbjct: 135 LINQWCNVVRWEKS--TKPFLRTAEFLWQEGHTAHRTKEDAEEEALRMLEVYRDFVETDL 192

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
              ++    +  EK  G+   +                                      
Sbjct: 193 ALPVIKGEKSDNEKFAGASKTY------------------------------------TI 216

Query: 480 EYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           E ++ D  GR  Q GT   +  +    ++  +++   +  +   + +  +G   R IG +
Sbjct: 217 EALMSD--GRALQAGTSHNLGQHFAKAYDITFLDQDGQLKY---VWQTSWGITTRLIGAI 271

Query: 539 I----ENFKGNLPLWLSPIQAIVTTITSSAVEYA----QEIANLLKSHHLSIETDFRNE- 589
           +    ++    +P  ++PIQA++  I     E       EI   LKS  + IE D R+E 
Sbjct: 272 VMVHGDDRGLKIPPTIAPIQAVIVPIFGRQTELVLNKTNEIFTKLKSE-VRIELDDRDEY 330

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           T  +K  E  ++ +P+ I  G K+   + + + R  +     VS  + +P L 
Sbjct: 331 TPGWKFNEWEMRGVPVRIEIGPKDIQRQQVVLVRRDTGEKFTVSESELLPRLK 383


>gi|125775071|ref|XP_001358787.1| GA18849 [Drosophila pseudoobscura pseudoobscura]
 gi|54638528|gb|EAL27930.1| GA18849 [Drosophila pseudoobscura pseudoobscura]
          Length = 1725

 Score =  166 bits (420), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 73/390 (18%), Positives = 139/390 (35%), Gaps = 62/390 (15%)

Query: 273  WKIFQTLISYMRRKIKD-DYEEINTPQ-VLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            + I++ +  +   +I     +E   P  V    L ++  H   +   +  V  + D+   
Sbjct: 1266 FAIWKFIKQWFDAEITRLGVKECYFPIFVSKAVLEKEKTHIADFAPEVAWVTKSGDSDL- 1324

Query: 331  LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
                A++P +       +   ++SYR+LP+RL ++ +V R E        +R R F   +
Sbjct: 1325 AEPIAVRPTSETVMYPAYAKWIQSYRDLPLRLNQWNNVVRWEFKHP-QPFLRTREFLWQE 1383

Query: 391  AHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMK 449
             H  F ++E+   E L + +L   +Y       ++    T  EK  G D           
Sbjct: 1384 GHTAFASQEEAVKEVLDMLDLYALVYTHLLAIPVVKGRKTEKEKFAGGD----------- 1432

Query: 450  GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNA 508
                                     Y    E     A GR  Q  T   +  N    F  
Sbjct: 1433 -------------------------YTTTVE-AFISASGRAIQGATSHHLGQNFSKMFEI 1466

Query: 509  FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTTITSSA 564
             Y +  +++     + +  +G   R IG+MI     N  L L P    IQAIV     + 
Sbjct: 1467 VYEDPETQQKK--YVFQNSWGITTRTIGVMIMVHADNQGLVLPPNVACIQAIVVPCGITV 1524

Query: 565  ----------VEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKE 613
                      ++  +++   L    +  E D+R+  +  +K     +K +P+ +  G K+
Sbjct: 1525 NTTDEERAQLLDACKKLEQTLVGAGVRCEGDYRDNYSPGWKFNHWELKGVPLRLEVGPKD 1584

Query: 614  ASERS-IGIRRFGSTTTQKVSLLDAIPILT 642
               +  + +R   +     + L D    ++
Sbjct: 1585 LKAQQLVAVR-RDTGEKITLPLADVEKKIS 1613


>gi|289619828|emb|CBI54111.1| unnamed protein product [Sordaria macrospora]
          Length = 542

 Score =  166 bits (420), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 76/433 (17%), Positives = 147/433 (33%), Gaps = 70/433 (16%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
              E+  + ++++  + +L     + SG          I+  +  + +  I +   EE N
Sbjct: 52  KKNENFSQWYQEVVLKAELIEYYTEISGFFIMRPATMYIWNVIRKWFQEHIDELGVEETN 111

Query: 296 TPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
            P  L Q   + +  H + +   +  V  A D   ++   A++P +       +   ++S
Sbjct: 112 FPMFLSQKSLEKEKEHVEGFAPELAWVTKAGDKDLEV-PVAVRPTSEAVMYPYYAKWIRS 170

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           +R+LP RL ++ SV R E        +R R F   + H     EQ               
Sbjct: 171 HRDLPFRLNQWNSVVRWEAK-QTTPFLRAREFMWQEGHTAHLTEQAAG------------ 217

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
                                         E  +  V             T      G +
Sbjct: 218 ------------------------------EEQLLAV------PVVRGRKTEAEKFAGGY 241

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           Y    E  +  + GR  Q  T        S+     V   +EK   + + +  +G   R 
Sbjct: 242 YTTTVEGYIP-SNGRGIQGATSHCLGQNFSKMFDITVEDPAEKGKHIHVWQNSWGLSTRV 300

Query: 535 IGIMIENFKGNLPLWLSP----IQAIVTTIT----------SSAVEYAQEIANLLKSHHL 580
           IG+M+     +  L L P    IQ+I+  +            + ++   E+   LK   +
Sbjct: 301 IGVMVMIHGDDKGLVLPPRIAKIQSILIPVGLTAKMSAEEKDAHMKKVDELLATLKKAGV 360

Query: 581 SIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
             + D R   T  +K  +  +K +P+ I  G K+A++  I   R  +     + + +   
Sbjct: 361 RTDVDTREGYTPAWKFNDWELKGVPLRIEFGPKDAAKDVISYARRDTGEKGTIPIAELTT 420

Query: 640 ILTK--ESLPPDC 650
            + +  E++  D 
Sbjct: 421 KVPELLETIQQDM 433


>gi|195392357|ref|XP_002054824.1| GJ22578 [Drosophila virilis]
 gi|194152910|gb|EDW68344.1| GJ22578 [Drosophila virilis]
          Length = 603

 Score =  166 bits (420), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 89/439 (20%), Positives = 159/439 (36%), Gaps = 64/439 (14%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
            +Q         E++    + ++  + +L     D SG        + I++ + ++   +
Sbjct: 99  KKQTRLGLEATKEDNLPDWYSQVITKGELIEY-YDVSGCYILRHWSFAIWKCIRNWFDAE 157

Query: 287 IKD-DYEEINTPQ-VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           I     +E   P  V    L ++  H   +   +  V  + D+       A++P +    
Sbjct: 158 ITRMGVKECYFPIFVSKAALEREKTHIADFAPEVAWVTKSGDSDL-AEPIAVRPTSETVM 216

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNE 403
              +   ++SYR+LP+RL ++ +V R E        +R R F   + H  F +K +   E
Sbjct: 217 YPAYAKWIQSYRDLPIRLNQWNNVVRWEFK-HPQPFLRTREFLWQEGHTAFASKAEADKE 275

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            L+I +L   +Y D     ++    T  EK  G D                         
Sbjct: 276 VLEILDLYAQVYTDLLAIPVVKGRKTEKEKFAGGD------------------------- 310

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVM 522
                      Y    E     A GR  Q  T   +  N    F   Y +  +++     
Sbjct: 311 -----------YTTTVE-AFISASGRAIQGATSHHLGQNFSKMFEIVYEDPETQQKQ--Y 356

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTT----ITSSAVEYAQ----- 569
           +++  +G   R IG+MI     N  L L P    +QAIV      + +   E AQ     
Sbjct: 357 VYQNSWGITTRTIGVMIMVHADNQGLVLPPHVACVQAIVVPCGITVNTKDEERAQLLAAC 416

Query: 570 -EIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGST 627
            ++   L    +  E D+R+  +  +K     +K +PI I  G K+   + I   R  + 
Sbjct: 417 DKLEKRLNGAGVRCEGDYRDNYSPGWKFNHWELKGVPIRIELGPKDMQAKQIVAVRRDTG 476

Query: 628 TTQKVSLLDA---IPILTK 643
               ++L D    IP L +
Sbjct: 477 EKLTIALADVEKKIPALLE 495


>gi|47220882|emb|CAG03089.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1638

 Score =  166 bits (420), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 69/404 (17%), Positives = 143/404 (35%), Gaps = 35/404 (8%)

Query: 260  EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD-QHLWQQSGHWDSYRAN 317
             D SG        + I++ +  +   +I+    E    P  +    L ++  H + +   
Sbjct: 1139 YDVSGCYVLRPWSYSIWEAIKDFFDAEIRKLGVENCYFPMFVSQAALEKEKTHIEDFAPE 1198

Query: 318  MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
            +  V  +  T       A++P +       +   ++S+R+LP++L ++ +V R E     
Sbjct: 1199 VAWVTRSGKTEL-AEPIAVRPTSETVMYPAYAKWVQSHRDLPIKLNQWCNVVRWEFKHP- 1256

Query: 378  HGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
               +R R F   + H  F TKE+   E L+I +L   +Y++     ++    T  EK  G
Sbjct: 1257 QPFLRTREFLWQEGHTAFATKEEAAEEVLQILDLYARVYEELMAIPVVKGRKTEKEKFAG 1316

Query: 437  SDALWDDAENIMKGVLDTIKNSSQD--RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
             D      E  +      I+           G+  G  A   P          G      
Sbjct: 1317 GDYTTTV-EAFISASGRAIQVPGAPPSGAPEGLWWGAAADEAPAL-----CPQG----AT 1366

Query: 495  TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI- 553
            +  +  N    F   + +   +     +  +  +G   R IG++      N  L L P  
Sbjct: 1367 SHHLGQNFSKMFEIVFEDPK-KPGEKQLAFQNSWGITTRTIGVLTMVHGDNKGLVLPPRV 1425

Query: 554  ---QAIVTT----------ITSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHS 599
               Q ++               + +    +  + L+   + +++D R+  +  +K     
Sbjct: 1426 ACLQVVIIPCGITASLPEADRQALLAQCAKYQDHLQRAGVRVKSDLRDNYSPGWKFNHWE 1485

Query: 600  IKKIPIIIICGDKEASERS-IGIRRFGSTTTQKVSLLDAIPILT 642
            +K +P+ +  G K+  +R  + +R   +     V   +    L 
Sbjct: 1486 LKGVPVRLEVGPKDLQQRQCVAVR-RDTGAKLTVPEAEVEKQLR 1528


>gi|325279815|ref|YP_004252357.1| Prolyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712]
 gi|324311624|gb|ADY32177.1| Prolyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712]
          Length = 491

 Score =  166 bits (420), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 66/411 (16%), Positives = 155/411 (37%), Gaps = 73/411 (17%)

Query: 270 RKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCA--- 324
             G+ I++ +   +    K   +     P ++ +  + +++ H + +      V      
Sbjct: 39  PYGYAIWEKIQRQLDDMFKQTGHVNAYFPLLIPKSFFSKEADHVEGFAKECAVVTHYRLK 98

Query: 325 ----------DDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
                     D   K    + ++P +       + + ++SYR+LP+   ++ +V R E  
Sbjct: 99  NDPNGGGVVVDPAAKLEEEYIIRPTSETIIWNTYKNWIQSYRDLPILCNQWANVMRWEMR 158

Query: 375 GSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
                 +R   F   + H    TKE+   E  K+  +     +++    +++   +  E+
Sbjct: 159 --TRMFLRTAEFLWQEGHTAHATKEEALEEANKMVRVYADFAQNWMAVPVIMGSKSESER 216

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
             G               L+T                         E +++D  G+  Q 
Sbjct: 217 FAG--------------ALETF----------------------TIEALMQD--GKALQA 238

Query: 494 GTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPL 548
           GT   +  N    F+  + N+  +  +   +    +G   R +G +I    ++    LP 
Sbjct: 239 GTSHFLGQNFAKAFDVQFTNAEGKLEY---VWATSWGVSTRLMGALIMAHSDDNGLVLPP 295

Query: 549 WLSPIQAIVTTITSSAV------EYAQEIANLLKSHHLSIETDFRN-ETINYKIREHSIK 601
            L+P+Q ++  I   A       +  Q +   L++  +S++ D R+ +   +K  ++ +K
Sbjct: 296 KLAPLQVVIVPIYKGAEGLKKISDKVQGLIEKLRAKGISVKYDDRDTQKPGWKFADYELK 355

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
            +P+ +  G+++    +I + R  + T + + L   +  +  E L  D Q+
Sbjct: 356 GVPVRLAMGERDLENGTIEVARRDTLTKETLPLEGIVGHI--EKLLEDIQE 404


>gi|304404287|ref|ZP_07385949.1| prolyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
 gi|304347265|gb|EFM13097.1| prolyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
          Length = 482

 Score =  166 bits (420), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 74/437 (16%), Positives = 165/437 (37%), Gaps = 62/437 (14%)

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR 284
              ++     +    E   R +  + ++ +L   +    G I +  +G+++++ +   + 
Sbjct: 1   MAKEKGFVTEITPQSEDFSRWYIDVIKKAELMDYSPVR-GCIVFRPEGYELWENIQRDLD 59

Query: 285 RKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
           R+ K+  +     P  + +  + ++  H + +   +  V  A     + R  A++P +  
Sbjct: 60  RRFKETGHRNAYFPLFIPESFFQKEKEHVEGFNPELPWVTEAAGEKLEER-LAVRPTSET 118

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMF 401
               ++   ++SYR+LPV + ++ +V R E        +R   F   + H    T+ +  
Sbjct: 119 MFGHMYAKWIQSYRDLPVLINQWANVVRWEKR--TLPFLRTSEFLWQEGHTAHETETEAR 176

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E +++ ++     +DF    ++V   T  EK  G                         
Sbjct: 177 EETMRMLHVYRDFVQDFLAIPVVVGQKTPSEKFAG------------------------- 211

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHP 520
                      A      E ++KD  GR  Q GT      N    F+  +++  ++    
Sbjct: 212 -----------AVDTYSIEAMMKD--GRAVQAGTSHYLGTNFAVAFDIKFLDRENQLQ-- 256

Query: 521 VMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTIT-----SSAVEYAQEI 571
              H   +G   R IG +I    ++    LP  ++P QAI+  I         +    E+
Sbjct: 257 -FTHTTSWGVSTRLIGALIMVHGDDRGLALPPKVAPTQAIMIPIGPPKTRDVVMPRVDEL 315

Query: 572 ANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
              LK+  +    D R++ +  +K  E+ ++ +P+ I  G ++       +    S   +
Sbjct: 316 FAQLKAAGVRTRVDDRSDVSPGWKFNEYEMRGVPLRIEIGPRDCENGQAVLVSRVSGEKR 375

Query: 631 KVS---LLDAIPILTKE 644
            V    L++ +  + +E
Sbjct: 376 VVQQANLVEEVERMLEE 392


>gi|298373192|ref|ZP_06983182.1| proline--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058]
 gi|298276096|gb|EFI17647.1| proline--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058]
          Length = 493

 Score =  166 bits (420), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 72/425 (16%), Positives = 162/425 (38%), Gaps = 72/425 (16%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE+  + +  L  + DL   +     ++     G+ I++ + + + +  K+  +     P
Sbjct: 12  EENYSQWYNDLVVKADLAENSAVRGCMVI-KPYGYAIWEKMQAQLDKMFKETGHSNAYFP 70

Query: 298 QVLDQH-LWQQSGHWDSYRANMFAVKCA-------------DDTIKDLRTFALKPMNCPG 343
             + +  L +++ H + +      V                D   K      ++P +   
Sbjct: 71  LFIPKSYLSREADHVEGFAKECAVVTHYRLKNSPDGKGVTVDPAAKLEEELIVRPTSETI 130

Query: 344 HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFN 402
             + + + ++SYR+LP+ + ++ +V R E        +R   F   + H    T+E+   
Sbjct: 131 IWSTYKNWIQSYRDLPILVNQWANVVRWEMR--TRLFLRTAEFLWQEGHTAHATREEAME 188

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
           E  K+ N+     + +    ++  + +  E+  G               L+T        
Sbjct: 189 EATKMLNVYADFAERYMALPVVKGIKSANERFAG--------------ALETF------- 227

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPV 521
                            E +++D  G+  Q GT   +  N    F+  +VN  ++  +  
Sbjct: 228 ---------------CIEAMMQD--GKALQAGTSHFLGQNFAKAFDVQFVNKDNKLEY-- 268

Query: 522 MIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVEYA------QEI 571
            +    +G   R +G +I    +N    LP  L+PIQ ++  I  +A + A        +
Sbjct: 269 -VWATSWGVSTRLMGALIMAHSDNNGLVLPPRLAPIQVVIVPIYKNAEQLAAVAERIHPV 327

Query: 572 ANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
            + L+S  +S++ D   N+   +K  E+ +K +P+ +  G ++    ++ + R      Q
Sbjct: 328 VDRLRSLGVSVKFDDSDNKKPGWKFAEYELKGVPVRLALGGRDLENGTVEVFRRDKLEKQ 387

Query: 631 KVSLL 635
            + L 
Sbjct: 388 TMPLE 392


>gi|332880161|ref|ZP_08447843.1| proline--tRNA ligase [Capnocytophaga sp. oral taxon 329 str. F0087]
 gi|332681920|gb|EGJ54835.1| proline--tRNA ligase [Capnocytophaga sp. oral taxon 329 str. F0087]
          Length = 493

 Score =  166 bits (420), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 71/438 (16%), Positives = 157/438 (35%), Gaps = 73/438 (16%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
              E+    + +L  + DL     D  G +     G+ I++ +   +  K K+   +   
Sbjct: 10  KRSENYSSWYNELVVKADLAE-QSDVRGCMVIKPYGYAIWEKMQRVLDDKFKETGVQNAY 68

Query: 296 TPQVLDQHLW-QQSGHWDSYRANMFAVKCA-------------DDTIKDLRTFALKPMNC 341
            P ++ +    +++ H + +      V                D   K      ++P + 
Sbjct: 69  FPLLIPKSFLSKEAEHVEGFAKECAVVTHYRLKTNEDKTGVVVDPAAKLEEELIIRPTSE 128

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
                 + + ++SYR+LP+   ++ +V R E        +R   F   + H   T     
Sbjct: 129 TIIWNTYKNWIQSYRDLPILCNQWCNVMRWEMR--TRLFLRTAEFLWQEGH---TAHATR 183

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E  +   L++ +Y DF  +                                 +      
Sbjct: 184 EEAEERAKLMLKVYADFAEQY--------------------------------MAVPVVQ 211

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHP 520
            + +      GA      E +++D  G+  Q GT   +  N    FN  ++N  ++  + 
Sbjct: 212 GVKSETERFAGALDTYTIEAMMQD--GKALQSGTSHFLGQNFGKAFNVQFINKDNKLEYA 269

Query: 521 VMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAV------EYAQE 570
                  +G   R +G +I    ++    LP  L+PIQ ++  I  +A       E  + 
Sbjct: 270 WA---TSWGVSTRLMGALIMTHSDDNGLVLPPKLAPIQVVIVPIYKNAEQLKAIDEKVEG 326

Query: 571 IANLLKSHHLSIETDF-RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           I   L++  +S++ D   N+   +K  ++ +K +P+ ++ G ++    ++ + R  +   
Sbjct: 327 IVARLRALGISVKYDNADNKRPGFKFADYELKGVPVRLVMGGRDLENNTVEVMRRDTLEK 386

Query: 630 QKVS---LLDAIPILTKE 644
           +  +   + D +  L  E
Sbjct: 387 ETRTCDGIEDYVKTLLDE 404


>gi|327262446|ref|XP_003216035.1| PREDICTED: bifunctional aminoacyl-tRNA synthetase-like isoform 1
            [Anolis carolinensis]
          Length = 1524

 Score =  166 bits (419), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 75/454 (16%), Positives = 150/454 (33%), Gaps = 60/454 (13%)

Query: 208  WRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIF 267
             +GD++    +         +Q         EE+    + ++  + ++     D SG   
Sbjct: 1002 RQGDNSNLSSNGPGDGQGPKKQTRLGLEAKKEENLADWYSQVITKSEMIEY-YDVSGCYI 1060

Query: 268  WHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD-QHLWQQSGHWDSYRANMFAVKCAD 325
                 + +++ +  +   +IK    E    P  +    L ++  H   +   +  V  + 
Sbjct: 1061 LRPWAFAVWEAIKDFFDSEIKKLGVENCYFPMFVSQAALEKEKTHIADFAPEVAWVTRSG 1120

Query: 326  DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRG 385
             T       A++P +       +   ++S+R+LP++L ++ +V R E        +R R 
Sbjct: 1121 KTEL-AEPIAVRPTSETVMYPAYAKWVQSHRDLPIKLNQWCNVVRWEFKHP-QPFLRTRE 1178

Query: 386  FTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
            F   + H  F T E+   E L+I +L   +Y++     ++    T  EK  G D      
Sbjct: 1179 FLWQEGHTAFATYEEAAEEVLQILDLYARVYEELLAIPVVKGRKTEKEKFAGGD------ 1232

Query: 445  ENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPS 504
                                          Y    E     A GR  Q GT        S
Sbjct: 1233 ------------------------------YTTTVE-AFISASGRAIQGGTSHHLGQNFS 1261

Query: 505  RFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTT- 559
            +                  ++  +G   R IG+M      N+ L L P    +Q ++   
Sbjct: 1262 KMFEIVFEDPRTPGEKQYAYQNSWGLTTRTIGVMTMIHGDNMGLVLPPRVACVQVVIIPC 1321

Query: 560  ---------ITSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIIC 609
                        + +    E    L S ++    D R+  +  +K     +K +PI +  
Sbjct: 1322 GITNTLSEADKEALMTKCSEYRKRLLSANIRSRADLRDNYSPGWKFNHWELKGVPIRLEV 1381

Query: 610  GDKEASERS-IGIRRFGSTTTQKVSLLDAIPILT 642
            G ++      + +R   +      +  +A+  L 
Sbjct: 1382 GPRDMKSNQFVAVR-RDTGEKMTFAENEAVDQLR 1414


>gi|284166458|ref|YP_003404737.1| prolyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511]
 gi|284016113|gb|ADB62064.1| prolyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511]
          Length = 493

 Score =  166 bits (419), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 56/387 (14%), Positives = 128/387 (33%), Gaps = 55/387 (14%)

Query: 270 RKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDT 327
            +G+ +++ +   +    K+   + +  P  + +   + +    + +   +  V      
Sbjct: 45  PRGYALWEGIQDALDGWFKETGVDNVYFPMFIPESFLEREKDIVEGFDPEVAWVTQGGHE 104

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
             + R  A++P +            +S+R+LP+R+ ++ SV R E +       R + F 
Sbjct: 105 ELEER-LAVRPTSESIIAPFMADWTRSHRDLPLRINQWCSVVRWEAT-ETKPFFRTKEFM 162

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENI 447
             + H     ++                                      D +W      
Sbjct: 163 WQEGHTAHASDEGAW-----------------------------------DEVWTRLGQY 187

Query: 448 MKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRF 506
            +   D +                GA      E ++ D  G+  Q  T   +  +    F
Sbjct: 188 EELYEDVLAIPVLRGKKPEHDKFPGADTTTTVEALMPD--GKSVQGATSHNLGQSFAEAF 245

Query: 507 NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL----SPIQAIVTTI-- 560
           +  +V+   E+      +   +G   R +G +I     +  L L    +P Q ++  I  
Sbjct: 246 DITFVDEDEEERTA---YTTSWGLSWRALGALIMTHSDDQGLVLPPTIAPTQVVIVPIWQ 302

Query: 561 ---TSSAVEYAQEIANLLKSHHLSIETDFRNET-INYKIREHSIKKIPIIIICGDKEASE 616
                  +EY++ IA+ L+     +E D R+E    +K  EH +  +P+ +  G  E  +
Sbjct: 303 EDTKEDVLEYSENIADELEDAGFRVELDDRDERNPGFKFNEHELNGVPLRLEIGPYEVED 362

Query: 617 RSIGIRRFGSTTTQKVSLLDAIPILTK 643
             + +              + +  + +
Sbjct: 363 EEVTMVHRPDNEESVEDRDEIVESVDE 389


>gi|150403636|ref|YP_001330930.1| prolyl-tRNA synthetase [Methanococcus maripaludis C7]
 gi|171472898|sp|A6VK03|SYP_METM7 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|150034666|gb|ABR66779.1| prolyl-tRNA synthetase [Methanococcus maripaludis C7]
          Length = 460

 Score =  166 bits (419), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 76/427 (17%), Positives = 159/427 (37%), Gaps = 63/427 (14%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
                 +  +  +  ++ +     G   +   G+KI +     +R+ + +  ++E   P 
Sbjct: 1   MEFSEWYSDILEKAGIYDLRYPIKGCGVYLPYGFKIRRYSFEILRKLLDETGHDETLFPM 60

Query: 299 VLDQHLWQQSG-HWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           ++ ++L  + G H   +   +F V     T  +++  AL+P +      +    +K + +
Sbjct: 61  LIPENLLAKEGEHIKGFEDEVFWVTHGGKTPLEVK-LALRPTSETTMYYMMKQWIKVHTD 119

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRG-FTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           LP++L +  + +R E       L+R+R   +  +AH   T      +C       +++Y 
Sbjct: 120 LPLKLYQVVNTFRYETK-HTRPLIRLREIMSFKEAH---TAHATKEDCDAQIKEALNLYG 175

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           +F  E  +  + ++  +       WD                             GA Y 
Sbjct: 176 EFFDEICVPYIISKRPE-------WDKF--------------------------PGADYT 202

Query: 477 PKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
             F+ I  D  G+  Q GT+  +  N    F   +     EK     +++  +G  +R I
Sbjct: 203 MAFDTIYPD--GKTMQIGTVHNLGQNFAKTFELEFETPDGEKD---FVYQTCYGISDRAI 257

Query: 536 GIMIENFKGNLPLWL----SPIQAIVTTI-----TSSAVEYAQEIANLLKSHHLSIETDF 586
             +I        L +    +PIQ ++  +         +E  +E+ + LKS    +  D 
Sbjct: 258 ASLISVHGDEKGLVIPVDVAPIQIVLIPLLFKGKEEIVMEKIKELNSTLKSE-FRVHLDD 316

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS---LLDAIPILT- 642
           R+     K  +  IK +P+ I  G ++       I R  +     V    +L+ +  +  
Sbjct: 317 RDIRPGRKYNDWEIKGVPLRIELGPRDIENGQALIVRRDTGEKITVEYSNILEEVEKIVS 376

Query: 643 --KESLP 647
             KE+L 
Sbjct: 377 MYKENLK 383


>gi|242090883|ref|XP_002441274.1| hypothetical protein SORBIDRAFT_09g023590 [Sorghum bicolor]
 gi|241946559|gb|EES19704.1| hypothetical protein SORBIDRAFT_09g023590 [Sorghum bicolor]
          Length = 508

 Score =  166 bits (419), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 74/401 (18%), Positives = 140/401 (34%), Gaps = 63/401 (15%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKI------KDDYEEINTPQVLDQHLWQQSGHWDS 313
            D SG         +I++ L  +   +I         +    T  VL     ++  H + 
Sbjct: 52  YDISGCYILRPWAMEIWELLKEFFDAEIKKLKLKPYYFPLFVTENVLQ----KEKDHIEG 107

Query: 314 YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP 373
           +   +  V  +  +  +    A++P +       F+  ++S+R+LP+R  ++ +V R E 
Sbjct: 108 FAPEVAWVTKSGKSELEA-PIAIRPTSETVMYPYFSKWIRSHRDLPLRCNQWCNVVRWEF 166

Query: 374 SGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
           S      +R R F   + H  F TKE+   E L+I  L   IY++F    +     +  E
Sbjct: 167 SNPT-PFIRSREFLWQEGHTAFATKEEADEEVLQILELYRRIYEEFLAVPVSKGRKSEME 225

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
           K  G                                      Y    E  + +  GR  Q
Sbjct: 226 KFAGG------------------------------------LYTTSVEAFIPNT-GRGIQ 248

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL-- 550
             T        ++   F +   +EK    M+ +  +    R IG+M+     +  L L  
Sbjct: 249 GATSHCLGQNFAK--MFDITFENEKGVREMVWQNSWAYTTRSIGVMVMTHGDDKGLVLPP 306

Query: 551 --SPIQAIVTTITSSAVEY------AQEIANLLKSHHLSIETDFR-NETINYKIREHSIK 601
             +PIQ IV  +     +        +     L       + D R N +  +K     +K
Sbjct: 307 KVAPIQVIVIPVPYKDADTTAIKGACESAVYTLNQSGFRADLDTRENYSPGWKYSHWEMK 366

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +P+ I  G K+ + + + I R  +     + + + +  + 
Sbjct: 367 GVPLRIEIGPKDLANKQVRIVRRDNGAKVDIPVTNLVEEVK 407


>gi|313158764|gb|EFR58151.1| proline--tRNA ligase [Alistipes sp. HGB5]
          Length = 494

 Score =  166 bits (419), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 71/400 (17%), Positives = 151/400 (37%), Gaps = 71/400 (17%)

Query: 270 RKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCA--- 324
             G+ I++ +   + +  KD  ++    P  + +  + +++ H + +      V      
Sbjct: 42  PYGYAIWEKMHDALDKMFKDTGHQNAYFPLFIPKSFFSKEAHHVEGFAKECAVVTHYRLK 101

Query: 325 ----------DDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
                     D   K      ++P +       + + ++SYR+LP+   ++ +V R E  
Sbjct: 102 NDPEGKGVVVDPDAKLEEELIVRPTSETIIWNTYKNWIQSYRDLPILCNQWANVVRWEMR 161

Query: 375 GSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
                 +R   F   + H    T+E+   E  K+ ++     +++    ++V   +  E+
Sbjct: 162 --TRLFLRTAEFLWQEGHTAHATREEAVEEAEKMIHVYQRFAEEWMSLPVVVGHKSPNER 219

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
             G       AE+ +                               E +++D  G+  Q 
Sbjct: 220 FAG-------AEDTL-----------------------------TIEALMQD--GKALQS 241

Query: 494 GTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPL 548
           GT   +  N    F+  YVN   +  +   +    +G   R +G +I    +N    LP 
Sbjct: 242 GTSHFLGQNFAKAFDVQYVNKEGKLEY---VWATSWGVSTRLMGALIMAHSDNNGLVLPP 298

Query: 549 WLSPIQAIVTTITSSAVEYA------QEIANLLKSHHLSIETDFRNE-TINYKIREHSIK 601
            L+PIQ ++  I     + A      + IA  LK+  +S++ D R+     +K  E+ +K
Sbjct: 299 KLAPIQVVMIPIYKGDDQLAEIRTRFEAIAAQLKAKGISVKIDDRDNVRSGFKFAEYELK 358

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            +P+ +  G ++    +I + R  +   Q VS    +  +
Sbjct: 359 GVPVRLAMGPRDMENGTIELVRRDTLEKQTVSQEGLVERI 398


>gi|124008543|ref|ZP_01693235.1| prolyl-tRNA synthetase [Microscilla marina ATCC 23134]
 gi|123985917|gb|EAY25774.1| prolyl-tRNA synthetase [Microscilla marina ATCC 23134]
          Length = 498

 Score =  166 bits (419), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 71/451 (15%), Positives = 170/451 (37%), Gaps = 81/451 (17%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
              E     + +L ++ DL   ++    ++     G+ I++ + + + R  K   +    
Sbjct: 7   KRSEDYSAWYNELVKKADLAENSDVRGCMVI-KPYGFAIWEKMQAEIDRMFKATGHSNAY 65

Query: 296 TPQVLDQH-LWQQSGHWDSYRANMFAVKCA-------------DDTIKDLRTFALKPMNC 341
            P  + +  L +++ H + +      V                D   K      ++P + 
Sbjct: 66  FPLFIPKSYLSKEADHVEGFAKECAVVTHYRLKNAEDGSGVVVDPDAKLEEELIVRPTSE 125

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQM 400
               + +   ++SYR+LP+ L ++ +V R E        +R   F   + H    TKE+ 
Sbjct: 126 TVIWSSYKKWIQSYRDLPILLNQWANVVRWEMR--TRIFLRTSEFLWQEGHTAHATKEEA 183

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQ 460
             E +++ N+     ++F    ++  + +  E+  G+D  +                   
Sbjct: 184 EAETIQMMNVYAEFAENFMAVPVIKGIKSESERFAGADETY------------------- 224

Query: 461 DRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCH 519
                              E +++D  G+  Q GT   +  N    F+  ++N  +++  
Sbjct: 225 -----------------CIEALMQD--GKALQAGTSHFLGQNFAKAFDVKFLNKENKEE- 264

Query: 520 PVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVEY------AQ 569
             ++    +G   R +G +I    ++    LP  L+PIQ ++  I     ++      A 
Sbjct: 265 --LVWGTSWGVSTRLMGALIMAHSDDHGLVLPPKLAPIQVVIVPIYKGDEQFAAVSAKAN 322

Query: 570 EIANLLKSHHLSIETDFRN-ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG--- 625
           EI   L++  +S++ D R+     +K  +  +K +P+ +  G ++    ++ + R     
Sbjct: 323 EIKKALEAVGVSVKYDNRDTYKPGFKFADWEMKGVPVRLALGARDLENGTVEMARRDVVD 382

Query: 626 ----STTTQKVSLLDAIPILTKESLPPDCQK 652
               +   + V+  + +  +  ++   D Q+
Sbjct: 383 PNNRNAGKKVVNFDEVVAEV--QATLEDMQQ 411


>gi|11066246|gb|AAG28517.1|AF197899_1 prolyl-tRNA synthetase [Methanococcus maripaludis]
          Length = 460

 Score =  166 bits (419), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 71/418 (16%), Positives = 152/418 (36%), Gaps = 59/418 (14%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
                 +  +  +  ++ +     G   +   G+KI +     +R+ + +  ++E   P 
Sbjct: 1   MEFSEWYSDILEKAGIYDLRYPIKGCGVYLPYGFKIRRYSFEILRKLLDETGHDETLFPM 60

Query: 299 VLDQHLWQQSG-HWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           ++ ++L  + G H   +   +F V     T  +++  AL+P +      +    +K + +
Sbjct: 61  LIPENLLAKEGEHIKGFEDEVFWVTHGGKTPLEVK-LALRPTSETTMYYMMKQWIKVHTD 119

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRG-FTQDDAHV-FCTKEQMFNECLKIHNLIISIY 415
           LP++L +  + +R E       L+R+R   +  +AH    TK++   +  +   L  + +
Sbjct: 120 LPLKLYQVVNTFRYETK-HTRPLIRLREIMSFKEAHTAHATKKECDAQIEEALTLYKAFF 178

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
            + G   ++ K              WD                             GA Y
Sbjct: 179 DEIGVPYVISKRPE-----------WDKF--------------------------PGADY 201

Query: 476 GPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
              F+ I  D  G+  Q GT+  +  N    F   +     EK     +++  +G  +R 
Sbjct: 202 TMAFDTIYPD--GKTMQIGTVHNLGQNFAKTFELEFETPDGEKD---FVYQTCYGISDRA 256

Query: 535 IGIMIENFKGNLPLWL----SPIQAIVTTI-----TSSAVEYAQEIANLLKSHHLSIETD 585
           I  +I        L +    +PIQ ++  +         ++  +E+   LKS    +  D
Sbjct: 257 IASLISVHGDEKGLVIPVDVAPIQIVLIPLLFKGKEEIVMDKIKELNKTLKSE-FRVHLD 315

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            R+     K  +  +K +P+ I  G ++       I R  +     V   + +  + K
Sbjct: 316 DRDIRPGRKYNDWELKGVPLRIELGPRDIENGHALIVRRDTGEKITVEYSNILEEVEK 373


>gi|321248511|ref|XP_003191154.1| proline-tRNA ligase [Cryptococcus gattii WM276]
 gi|317457621|gb|ADV19367.1| proline-tRNA ligase, putative [Cryptococcus gattii WM276]
          Length = 740

 Score =  166 bits (419), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 76/492 (15%), Positives = 160/492 (32%), Gaps = 77/492 (15%)

Query: 162 LESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIY 221
           L+S+   E V +    ++ +L    H  +  +     ++   A A    D    M  R  
Sbjct: 185 LDSLVEGEGVKVV---DFAELKASAHAPAEKKPAAPKEVKAEASATAADDERYEMAIRFK 241

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLIS 281
                +                     L +   L +   D SG        + I+Q + +
Sbjct: 242 KDEDFSGWYTDV---------------LLKGEMLDY--YDISGCYILRPWSFSIWQIIQN 284

Query: 282 YMRRKIKD-DYEEINTPQ-VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPM 339
           +   +IK    ++   P  V    L ++  H + +   +  V  A  +  +    A++P 
Sbjct: 285 WFDDEIKKLGVQDCYFPMFVSSARLEKEKDHIEGFAPEVAWVTKAGSSDLE-EHIAIRPT 343

Query: 340 NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKE 398
           +       +   + S+R+LP++L ++ SV R E        +R R F   + H  F  K 
Sbjct: 344 SETVMYPYYAKWINSHRDLPLKLNQWNSVVRWEFKNP-QPFLRTREFLWQEGHTAFLDKA 402

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNS 458
               E L I  L   +Y+D     ++    +  EK  G D                    
Sbjct: 403 DADKEVLDILELYRKVYEDILAVPVIPGKKSEKEKFAGGD-------------------- 442

Query: 459 SQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC 518
                           Y    E  +           +  +  N    F+    +    + 
Sbjct: 443 ----------------YTTTVEGFIPTTGRGIQAATSHHLGQNFSKMFDITVESPDKSQG 486

Query: 519 HPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTTI--------TSSAVE 566
             +  ++  +G   R +G+M+     +  L L P     Q  +  +             +
Sbjct: 487 R-LYAYQNSWGLSTRSLGVMVMVHGDDQGLVLPPRVALQQVAIVPVGLSKGEGKNQPIYD 545

Query: 567 YAQEIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASER-SIGIRRF 624
              ++   L +  +  + D R   T  +K  +  ++ +P+ +  G ++ +   ++ +RR+
Sbjct: 546 ACLKLERELVAAGIRAKADLREGYTPGWKFNDWEMRGVPLRLELGPRDIANNSTLSVRRY 605

Query: 625 GSTTTQKVSLLD 636
            +     + L D
Sbjct: 606 DNHKA-PMPLSD 616


>gi|291087823|ref|ZP_06572117.1| proline--tRNA ligase [Clostridium sp. M62/1]
 gi|291073860|gb|EFE11224.1| proline--tRNA ligase [Clostridium sp. M62/1]
          Length = 493

 Score =  166 bits (419), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 67/432 (15%), Positives = 161/432 (37%), Gaps = 58/432 (13%)

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISY 282
                +++L + +  ++    + +  + ++ +L   +     ++     G+ I++ +   
Sbjct: 15  ITMAKEKKLVEAITSMDVDFAQWYTDVVKKAELVDYSSVKGCMVI-KPDGYAIWENIQKE 73

Query: 283 MRRKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
           + R+ K+   + +  P  + + L  ++  H + +   +  V          R   ++P +
Sbjct: 74  LDRRFKETGVQNVYMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGLEPLQER-MCVRPTS 132

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
                  +   ++SYR+LP    ++ SV R E   +    +R R F   + H      + 
Sbjct: 133 ETLFCDFYARDIQSYRDLPKLYNQWCSVVRWEK--TTRPFLRSREFLWQEGHTAHATAEE 190

Query: 401 FNECLK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSS 459
             E  + + NL     ++     ++    T  EK  G++A +                  
Sbjct: 191 AEERTELMLNLYADFCEEVLAMPVIRGRKTDKEKFAGAEATY------------------ 232

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKC 518
                               E ++ D  G+  Q GT           F   + +  ++  
Sbjct: 233 ------------------TIEALMHD--GKALQSGTSHNFGDGFAKAFGIQFSDKDNKLK 272

Query: 519 HPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEI 571
           +   +H+  +G   R IG +I    ++    LP  ++P Q ++  I       ++ A E+
Sbjct: 273 Y---VHQTSWGMTTRLIGAIIMVHGDDSGLVLPPRIAPTQVVIVPIRQQAEGVLDKAYEL 329

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
            ++L     S++ D  +++  +K  E  ++ IP+ +  G K+  +    + R  +     
Sbjct: 330 KDILS--GFSVKVDDSDKSPGWKFSESEMRGIPVRVEIGPKDLEQNQAVLVRRDTHEKIT 387

Query: 632 VSLLDAIPILTK 643
           VSL +    +T+
Sbjct: 388 VSLDEIKEKVTE 399


>gi|206603805|gb|EDZ40285.1| Prolyl-tRNA synthetase [Leptospirillum sp. Group II '5-way CG']
          Length = 422

 Score =  166 bits (419), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 73/422 (17%), Positives = 149/422 (35%), Gaps = 25/422 (5%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK- 288
            +        E+E   HR + R   +  +A    GV  +     +  + + + +R ++  
Sbjct: 7   PVQTLHEEPAEAEVVSHRLMLRAGLVRKLA---GGVYSYLPMAVRALRKVEAIIREEMNS 63

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
              +E+  P +    LW+++G W +Y   +F +       +  R FAL P +      + 
Sbjct: 64  AGGQEVLLPALQPSDLWEKTGRWQAYGPELFRLHD-----RHERAFALGPTHEEVITDLV 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KI 407
           +  ++SYR+LP    +  + +R+E      G++R R F   DA+ F   E+   +   ++
Sbjct: 119 SQVIRSYRQLPFIAYQIQTKFRDERRPRF-GILRGREFIMKDAYSFSVSEENARQIYTRM 177

Query: 408 HNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGV 467
                 I+   G +  MV+  +       S      A++    V+   K S    I    
Sbjct: 178 QEAYGRIFLRLGLDHRMVEADSGLIGGNLSHEFMVMADSGEDTVVTCEKCSWASNIEKAP 237

Query: 468 LLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAV 527
                   G   E      +G  +  G         +     +++S   K  P  +    
Sbjct: 238 DARVCPVCGSVLESRTAIEVGHVFYLGH-----KYSTPMETTFLDSAG-KEVPFFMGCYG 291

Query: 528 FGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTITSSAVEY---AQEIANLLKSHHL 580
            G   R +   IE    +     P+ ++P +  V  +     E       + +L      
Sbjct: 292 IGVS-RILAATIEQSHDDKGIIWPVAMAPYRTAVLPLGPGMSERREVLSLLESLESLWPG 350

Query: 581 SIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
               D R      K ++  ++  P  +I GD+   +    ++   +     + L D   +
Sbjct: 351 ESYFDDREIRPGMKFQDADLRGFPFQVILGDRHVDKGDGEVKIRRTGERLVLPLKDIPAL 410

Query: 641 LT 642
           L+
Sbjct: 411 LS 412


>gi|330995811|ref|ZP_08319708.1| proline--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
 gi|329574541|gb|EGG56106.1| proline--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
          Length = 493

 Score =  166 bits (419), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 70/439 (15%), Positives = 157/439 (35%), Gaps = 75/439 (17%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
              E+    + +L  + DL     D  G +     G+ I++ +   +  K K+   +   
Sbjct: 10  KRSENYSSWYNELVVKADLAE-QSDVRGCMVIKPYGYAIWEKMQRVLDDKFKETGVQNAY 68

Query: 296 TPQVLDQHLW-QQSGHWDSYRANMFAVKCA-------------DDTIKDLRTFALKPMNC 341
            P ++ +    +++ H + +      V                D   K      ++P + 
Sbjct: 69  FPLLIPKSFLSKEAEHVEGFAKECAVVTHYRLKTNEDKTGVVVDPAAKLEEELIIRPTSE 128

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQM 400
                 + + ++SYR+LP+   ++ +V R E        +R   F   + H    T+E+ 
Sbjct: 129 TIIWNTYKNWIQSYRDLPILCNQWCNVMRWEMR--TRLFLRTAEFLWQEGHTAHATREEA 186

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQ 460
                ++      +Y DF  +                                 +     
Sbjct: 187 EERAKQML----KVYADFAEQY--------------------------------MAVPVV 210

Query: 461 DRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCH 519
             + +      GA      E +++D  G+  Q GT   +  N    FN  ++N  ++  +
Sbjct: 211 QGVKSETERFAGALDTYTIEAMMQD--GKALQSGTSHFLGQNFGKAFNVQFINKDNKLEY 268

Query: 520 PVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAV------EYAQ 569
                   +G   R +G +I    ++    LP  L+PIQ ++  I  +A       E  +
Sbjct: 269 AWA---TSWGVSTRLMGALIMTHSDDNGLVLPPKLAPIQVVIVPIYKNAEQLKAIDEKVE 325

Query: 570 EIANLLKSHHLSIETDF-RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
            I   L++  +S++ D   N+   +K  ++ +K +P+ ++ G ++    ++ + R  +  
Sbjct: 326 GIVARLRALGISVKYDNADNKRPGFKFADYELKGVPVRLVMGGRDLENNTVEVMRRDTLE 385

Query: 629 TQKVS---LLDAIPILTKE 644
            +  +   + D +  L  E
Sbjct: 386 KETRTCDGIEDYVKTLLDE 404


>gi|326503454|dbj|BAJ86233.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326506156|dbj|BAJ91317.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 518

 Score =  166 bits (419), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 76/402 (18%), Positives = 144/402 (35%), Gaps = 65/402 (16%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKI------KDDYEEINTPQVLDQHLWQQSGHWDS 313
            D SG         +I++ L  +   +I         +    T  VL     ++  H + 
Sbjct: 62  YDISGCYILRPWAMEIWELLKEFFDAEIKKLKLKPYYFPLFVTENVLQ----KEKDHIEG 117

Query: 314 YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP 373
           +   +  V  +  +  +    A++P +       F+  ++S+R+LP++  ++ +V R E 
Sbjct: 118 FAPEVAWVTKSGKSDLEA-PIAIRPTSETVMYPYFSKWIRSHRDLPLKCNQWCNVVRWEF 176

Query: 374 SGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
           S      +R R F   + H  F TKE+   E L+I  L   IY++F    +     +  E
Sbjct: 177 SNPT-PFIRSREFLWQEGHTVFATKEEADEEVLQILELYRRIYEEFLAVPVSKGRKSEME 235

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
           K  G                                      Y    E  + +  GR  Q
Sbjct: 236 KFAGG------------------------------------LYTTSVEAFIPNT-GRGIQ 258

Query: 493 CGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL- 550
             T   +  N    F+   +   +EK    M+ +  +    R IG+M+     +  L L 
Sbjct: 259 GATSHCLGQNFAKMFD---ITFENEKGERSMVWQNSWAYTTRSIGVMVMTHGDDKGLVLP 315

Query: 551 ---SPIQAIVTTI------TSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIREHSI 600
              +PIQ IV  +      T++     +     L    +  + D R N +  +K  +  +
Sbjct: 316 PKVAPIQVIVIPVPFKDADTTAIKGACESAVYTLNQAGIRADLDARENYSPGWKYSQWEM 375

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           K +P+ I  G K+ + + + I R  +     +   D +  + 
Sbjct: 376 KGVPLRIEIGPKDLANKQVRIVRRDNGAKVDIPSTDLVEQVR 417


>gi|257869801|ref|ZP_05649454.1| prolyl-tRNA synthetase [Enterococcus gallinarum EG2]
 gi|257803965|gb|EEV32787.1| prolyl-tRNA synthetase [Enterococcus gallinarum EG2]
          Length = 477

 Score =  166 bits (419), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 64/428 (14%), Positives = 148/428 (34%), Gaps = 60/428 (14%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEE-INT 296
            +      + +  ++ +L   +     +  +   G+++++ +     R +K +       
Sbjct: 3   QKNDFTEWYIQTIQKAELMAYSPVKGSI-IFRPDGFELWEHIQEEFNRFLKAEGIRNAYF 61

Query: 297 PQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P ++ Q  + +++ H + +   +  V    +  K     AL+P +     + F+  + SY
Sbjct: 62  PMLIPQSFFTKEADHIEGFAPELPWVTEVGNE-KLEEPLALRPTSETMIGSAFSDWINSY 120

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN-ECLKIHNLIISI 414
           R+LP  + ++ +V+R E        +R   F   + H     E       L I +    +
Sbjct: 121 RDLPYEINQWANVFRWEKK--TLPFLRTSEFLWQEGHTAHEDEAGARKRTLGILDEYARL 178

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            ++F    +     T  E+  G                                    A 
Sbjct: 179 CEEFLAIPVYKGQKTPSERFAG------------------------------------AV 202

Query: 475 YGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
                E ++KD  G+  Q GT           F+  Y++  ++       H   +G   R
Sbjct: 203 DTYSIEAMMKD--GKAVQAGTSHYMGTKFAEAFDITYLSKENK---HTYAHTTSWGVSTR 257

Query: 534 FIGIMIENFKGN----LPLWLSPIQAIVTTI-----TSSAVEYAQEIANLLKSHHLSIET 584
            +G +I           P  ++P Q ++  +       + +E  +E+    K+  + +  
Sbjct: 258 LLGALIMTHGDENGLVFPPTIAPTQIVLMPVGPWKKNPAILEKLEELFASFKAKGIRVRL 317

Query: 585 DFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           D  + +  YK  E  +K   + I CG ++     + ++       Q V+  D    + ++
Sbjct: 318 DDSDNSPGYKFNEWELKGACLRIECGPRDLENGHVMVKVRDLAEKQTVAFDDLADFVDQQ 377

Query: 645 --SLPPDC 650
             ++ P  
Sbjct: 378 LAAMTPRL 385


>gi|110667672|ref|YP_657483.1| prolyl-tRNA synthetase [Haloquadratum walsbyi DSM 16790]
 gi|121689813|sp|Q18JG3|SYP_HALWD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|109625419|emb|CAJ51843.1| proline--tRNA ligase [Haloquadratum walsbyi DSM 16790]
          Length = 512

 Score =  166 bits (419), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 65/389 (16%), Positives = 138/389 (35%), Gaps = 57/389 (14%)

Query: 270 RKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDT 327
            + + +++ + SY+  R  +   +    P  + +   + +    + +   +  V+ A   
Sbjct: 46  PRAYGLWERVQSYLDTRFKQTGVQNAYFPLFIPEGYLEREKEIVEGFDPEVAWVEQAGRN 105

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
             + R  A++P +        +  ++SYR+LP+R+ ++ SV R E +       R + F 
Sbjct: 106 ELEER-LAVRPTSESIIAPYLSQWIRSYRDLPLRVNQWTSVVRWEAT-ETKPFFRTKEFL 163

Query: 388 QDDAHVFCTKEQMFN-ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
             + H           E +   N   S Y+D     ++       +K  G+D        
Sbjct: 164 WQEGHTAHATRADAWAETMLRLNQYESTYEDLLAIPVLQGAKPEHDKFPGADT------- 216

Query: 447 IMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV-DFNLPSR 505
                                            E ++ D  G+  Q  T           
Sbjct: 217 -----------------------------TTTVEALMPD--GKSVQGATSHYLGTEFADA 245

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL----SPIQAIVTTI- 560
           F+  Y ++        + H   +G   R +G +I     N  L L    +P Q ++  I 
Sbjct: 246 FDITYTDTDETSR---VAHTTSWGLSWRALGALIMTHSDNQGLVLPPTVAPEQVVIVPIW 302

Query: 561 ----TSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEAS 615
                   +EYA+++AN L    + +E D R++    +K  E  +K +P+    G  EA+
Sbjct: 303 QTETKERVLEYAEDVANNLDDAGIRVELDDRDDQNPGFKFNEWELKGVPLRAEIGPDEAT 362

Query: 616 ERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           E ++ +       +      + +  + ++
Sbjct: 363 EGTVTLIHRPDGESITAERSEIVETVQEQ 391


>gi|149743790|ref|XP_001488980.1| PREDICTED: glutamyl-prolyl-tRNA synthetase isoform 1 [Equus caballus]
          Length = 1512

 Score =  166 bits (419), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 75/436 (17%), Positives = 146/436 (33%), Gaps = 60/436 (13%)

Query: 226  NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
              +Q         EE+    + ++  + ++     D SG        + I++++  +   
Sbjct: 1008 PKKQTRLGLEAKKEENLSEWYSQVITKSEMIEY-YDVSGCYILRPWAYSIWESIKDFFDA 1066

Query: 286  KIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPG 343
            +IK    E    P  + Q   + +  H   +   +  V  +  T       A++P +   
Sbjct: 1067 EIKKLGVENCYFPMFVSQGALEKEKTHIADFAPEVAWVTRSGKTEL-AEPIAVRPTSETV 1125

Query: 344  HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFN 402
                +   ++S+R+LP+RL ++ +V R E        +R R F   + H  F T E+   
Sbjct: 1126 MYPAYAKWVQSHRDLPIRLNQWCNVVRWEFK-HPQPFLRTREFLWQEGHSAFATFEEAAE 1184

Query: 403  ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
            E L+I +L   +Y++     ++    T  EK  G D                        
Sbjct: 1185 EVLQILDLYAQVYEELLAIPVVKGRKTEKEKFAGGD------------------------ 1220

Query: 463  INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
                        Y    E     A GR  Q GT        S+                 
Sbjct: 1221 ------------YTTTIE-AFISASGRAIQGGTSHHLGQNFSKMFEIIFEDPKTPGEKQF 1267

Query: 523  IHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTT----------ITSSAVEYA 568
             ++  +G   R IG+M      N+ L L P    +Q +V               + +   
Sbjct: 1268 AYQNSWGLTTRTIGVMTMVHGDNMGLVLPPRVACVQVVVIPCGITNALSEEDRDALIAKC 1327

Query: 569  QEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERS-IGIRRFGS 626
             +    L + ++ +  D R+  +  +K     +K +PI +  G ++      + +R   +
Sbjct: 1328 NDYRRRLLNVNIRVRVDLRDNYSPGWKFNHWELKGVPIRLEVGPRDMKSCQFVAVR-RDT 1386

Query: 627  TTTQKVSLLDAIPILT 642
                 V+  +A   L 
Sbjct: 1387 GEKLTVAENEAETKLQ 1402


>gi|225011920|ref|ZP_03702358.1| prolyl-tRNA synthetase [Flavobacteria bacterium MS024-2A]
 gi|225004423|gb|EEG42395.1| prolyl-tRNA synthetase [Flavobacteria bacterium MS024-2A]
          Length = 492

 Score =  166 bits (419), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 66/436 (15%), Positives = 158/436 (36%), Gaps = 73/436 (16%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
                 + + ++    DL   +     ++     G+ I++ + + + +  K   +E    
Sbjct: 8   RSTDYSKWYNEIVVNADLAENSAVRGCMVI-KPYGYAIWEKMQAELDKMFKATGHENAYF 66

Query: 297 PQVLDQHLWQ-QSGHWDSYRANMFAVKCA--------------DDTIKDLRTFALKPMNC 341
           P  + + L++ +  + + +      V                 D   K      ++P + 
Sbjct: 67  PLFVPKSLFEAEEKNAEGFAKECAVVTHYRLKNDENNPGKLIVDPNAKLEEELVVRPTSE 126

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQM 400
                 +   ++SYR+LP+ + ++ +V R E        +R   F   + H    TK + 
Sbjct: 127 AVIWNTYKTWIQSYRDLPILINQWANVVRWEMR--TRLFLRTAEFLWQEGHTAHATKAEA 184

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQ 460
             E   ++ +     +++    ++  + T  E+  G++  +                   
Sbjct: 185 MTEAKLMNQVYADFVENYMAIPVIQGVKTESERFAGAEETF------------------- 225

Query: 461 DRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCH 519
                              E +++D  G+  Q GT   +  N    F+  Y  +     +
Sbjct: 226 -----------------CIEALMQD--GKALQAGTSHFLGQNFAKAFDVKYATAEGGLEY 266

Query: 520 PVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTIT------SSAVEYAQ 569
              +    +G   R IG +I    ++    LP  L+P Q ++  I       +     A+
Sbjct: 267 ---VWATSWGVSTRLIGALIMTHSDDNGLVLPPNLAPTQVVIIPIYRGEEEQNKVAATAE 323

Query: 570 EIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
           +I   L+  ++ ++ D R++    YK  ++ +K +P+ I  G K+    ++ I R  + T
Sbjct: 324 KIKVALEEQNIRVKFDNRDKFKPGYKFNDYELKGVPLRIAIGPKDLQNGTVEIARRDNLT 383

Query: 629 TQKVSLLDAIPILTKE 644
            + VS  + +  ++ +
Sbjct: 384 KEVVSQDEIVDYISSQ 399


>gi|86141210|ref|ZP_01059756.1| prolyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217]
 gi|85831769|gb|EAQ50224.1| prolyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217]
          Length = 490

 Score =  166 bits (419), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 72/433 (16%), Positives = 161/433 (37%), Gaps = 71/433 (16%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
             E   + + +L  + DL   +     ++     G+ I++ + + + R  K+  +E    
Sbjct: 8   RAEDYSKWYNELVVKADLAENSGVRGCMVI-KPYGYAIWEKMQAELDRMFKETGHENAYF 66

Query: 297 PQVLDQHLW-QQSGHWDSYRANMFAVKCA------------DDTIKDLRTFALKPMNCPG 343
           P  + +  + +++ H D +      V               D   K      ++P +   
Sbjct: 67  PLFIPKSYFSKEASHVDGFAKECAVVTHYRLKNDEDGSIIVDPEAKLEEELIVRPTSETI 126

Query: 344 HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFN 402
               +   ++SYR+LP+++ ++ +V R E        +R   F   + H    TK++   
Sbjct: 127 IWDTYRKWIQSYRDLPIKVNQWANVVRWEMR--TRLFLRTAEFLWQEGHTAHATKDEAIA 184

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
           E  ++  +     + F    ++    T  E+  G+   +                     
Sbjct: 185 EAEQMMRVYADFAEHFMALPVVRGTKTESERFAGALETY--------------------- 223

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPV 521
                            E +++D  G+  Q GT   +  N    F+  +      + H  
Sbjct: 224 ---------------CIEALMQD--GKALQAGTSHFLGQNFAKAFDVKFATKEGGQEH-- 264

Query: 522 MIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTIT------SSAVEYAQEI 571
            +    +G   R +G ++    ++    LP  L+PIQ ++  I        S  + A+E+
Sbjct: 265 -VWATSWGVSTRLMGALVMTHSDDNGLVLPPKLAPIQVVIVPIYKGEEQLDSISQVAKEL 323

Query: 572 ANLLKSHHLSIETDFRN-ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
              L+   +S++ D R+     +K  E+ +K +P+ I  G ++  +R++ + R  + T +
Sbjct: 324 KRELQLLGISVKFDDRDTHKPGWKFNEYELKGVPLRIAIGPRDLEKRTVELARRDTLTKE 383

Query: 631 KVSLLDAIPILTK 643
            VS  D +  +  
Sbjct: 384 TVSKDDIVSRVQD 396


>gi|291515023|emb|CBK64233.1| prolyl-tRNA synthetase [Alistipes shahii WAL 8301]
          Length = 494

 Score =  166 bits (419), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 72/411 (17%), Positives = 156/411 (37%), Gaps = 73/411 (17%)

Query: 270 RKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCA--- 324
             G+ I++ + + + +  KD  ++    P  + +  + +++ H + +      V      
Sbjct: 42  PYGYAIWEKMQAALDKMFKDTGHQNAYFPLFIPKSFFSKEAHHVEGFAKECAVVTHYRLK 101

Query: 325 ----------DDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
                     D   K      ++P +       + + ++SYR+LP+   ++ +V R E  
Sbjct: 102 NDPEGKGVVVDPDAKLEEELIVRPTSETIIWNTYKNWIQSYRDLPILCNQWANVVRWEMR 161

Query: 375 GSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
                 +R   F   + H    T+E+   E  K+  +     +++    ++V   +  E+
Sbjct: 162 --TRLFLRTAEFLWQEGHTAHATREEAVEEAEKMIRVYRKFAEEWMSLPVVVGHKSPNER 219

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
             G       AE+ +                               E +++D  G+  Q 
Sbjct: 220 FAG-------AEDTL-----------------------------TIEALMQD--GKALQS 241

Query: 494 GTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPL 548
           GT   +  N    F+  YVN   +  +   +    +G   R +G +I    +N    LP 
Sbjct: 242 GTSHFLGQNFAKAFDVQYVNKEGKLEY---VWATSWGVSTRLMGALIMAHSDNNGLVLPP 298

Query: 549 WLSPIQAIVTTITSSAVEYAQ------EIANLLKSHHLSIETDFRNE-TINYKIREHSIK 601
            L+PIQ ++  I  +  + A+       IA  L+   +S++ D R+     +K  E+ +K
Sbjct: 299 KLAPIQVVMVPIYKTPEQLAEICARFGAIAAELRDKGISVKIDDRDNVRPGFKFAEYELK 358

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
            +P+ +  G ++    +I + R  +   Q +S    +  +  E L  + Q+
Sbjct: 359 GVPVRLAMGGRDLENGTIELVRRDTLEKQTISQEGLVERI--EGLMAEIQE 407


>gi|288801976|ref|ZP_06407417.1| proline--tRNA ligase [Prevotella melaninogenica D18]
 gi|302347070|ref|YP_003815368.1| proline--tRNA ligase [Prevotella melaninogenica ATCC 25845]
 gi|288335411|gb|EFC73845.1| proline--tRNA ligase [Prevotella melaninogenica D18]
 gi|302151118|gb|ADK97379.1| proline--tRNA ligase [Prevotella melaninogenica ATCC 25845]
          Length = 493

 Score =  165 bits (418), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 65/438 (14%), Positives = 155/438 (35%), Gaps = 70/438 (15%)

Query: 233 QYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DY 291
           + +    ++  + +  L  + DL   +     ++     G+ I++ + + + +  K+   
Sbjct: 6   KEMTKRADNYSQWYNDLVIKADLIEQSAVRGCMVI-KPYGYAIWEKIQAQLDKMFKETGV 64

Query: 292 EEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCA-------------DDTIKDLRTFALK 337
           +    P ++ +    +++ H   +      V                D   K      ++
Sbjct: 65  QNAYFPMLIPKSFLSREAEHVKGFAKECAVVTHYRLKATEDGNAVQVDPNAKLEEELIIR 124

Query: 338 PMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK 397
           P +       + + + S+R+LP+   ++ +V R E        +R   F   + H   T 
Sbjct: 125 PTSETIIWNTYKNWIHSWRDLPLMCNQWCNVMRWEMR--TRPFLRTSEFLWQEGH---TA 179

Query: 398 EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKN 457
                E  K    ++ +Y DF                         AE  +         
Sbjct: 180 HATREEAEKEAQTMLRVYADF-------------------------AEKWLA-------V 207

Query: 458 SSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSE 516
                + +      GA      E +++D  G+  Q GT   +  N    F+  ++N  ++
Sbjct: 208 PVVQGVKSETERFAGALDTYTIEAMMQD--GKALQSGTSHFLGQNFAKSFDVTFLNKENK 265

Query: 517 KCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAV------E 566
              P  +    +G   R IG +I    ++    LP  ++PIQ ++  I           +
Sbjct: 266 ---PEYVWATSWGVSTRLIGALIMTHSDDNGLVLPPKIAPIQVVIVPIFKGEEQLKALTD 322

Query: 567 YAQEIANLLKSHHLSIETDF-RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
             Q + + L++  ++++ D   N+   +K  ++ +K +P+ +  G ++    +I + R  
Sbjct: 323 KLQPVIDQLRALGITVKYDDADNKRPGFKFADYELKGVPVRLAMGGRDLENNTIEVMRRD 382

Query: 626 STTTQKVSLLDAIPILTK 643
           +   + VS    +  +  
Sbjct: 383 TLEKESVSFDGIVERIKN 400


>gi|160943086|ref|ZP_02090323.1| hypothetical protein FAEPRAM212_00565 [Faecalibacterium prausnitzii
           M21/2]
 gi|158445555|gb|EDP22558.1| hypothetical protein FAEPRAM212_00565 [Faecalibacterium prausnitzii
           M21/2]
 gi|295104698|emb|CBL02242.1| prolyl-tRNA synthetase [Faecalibacterium prausnitzii SL3/3]
          Length = 479

 Score =  165 bits (418), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 78/437 (17%), Positives = 158/437 (36%), Gaps = 59/437 (13%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
             ++L Q +   EE+  + +  +  + +L   +    G I     G  I++ +   +  +
Sbjct: 4   DNKKLVQAITSQEENFAQWYTDICVKAELVEYSSVK-GFIILRPYGQAIWELIQKDLDAR 62

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDS-YRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
            K   +E +  P ++ + L Q+ G   + +   +  V        + R  A++P +    
Sbjct: 63  FKATGHENVAMPVLIPESLLQKEGELVNGFAPEVAWVTMGGSDKLEER-LAVRPTSETMF 121

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
              ++  L SYRELP++  ++ SV R E   +    +R R F   + H            
Sbjct: 122 CDHWSRVLHSYRELPMKYNQWCSVVRWEK--TTRPFLRSREFWWQEGHTIHETAAEAEAE 179

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            +      +                            D  E  +   +   + + +++  
Sbjct: 180 TQQQLNCYA----------------------------DTCEQDLAIPVVKGRKTDKEKF- 210

Query: 465 TGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMI 523
                  GA      E ++KD  G+  Q GT           ++  +    ++  HP   
Sbjct: 211 ------AGAEATYTIEAMMKD--GKALQSGTSHYFGDKFSKAYDVTFTGRDNQLHHPF-- 260

Query: 524 HRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTI---TSSAVEYAQEIANLLK 576
            +  +G   R +G +I     +    LP  ++PIQ +V  I        E A E+A  + 
Sbjct: 261 -QTSWGVSTRLVGAIIMTHGDDDGLILPPAIAPIQVVVVPIAAHKPGVSEKAAELAEKIS 319

Query: 577 SHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
            +   ++ D  +    +K  +  +K +P+ +  G K+  +    + R  +     VSL +
Sbjct: 320 KY-ARVKLDDSDNAPGWKFAQWEMKGVPLRLEIGPKDLEKNQCVLVRRDTREKVFVSLDE 378

Query: 637 ---AIPILTKESLPPDC 650
              AIP    E+L  D 
Sbjct: 379 LETAIPA-QLEALRKDL 394


>gi|331003535|ref|ZP_08327032.1| prolyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str. F0167]
 gi|330412376|gb|EGG91767.1| prolyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str. F0167]
          Length = 479

 Score =  165 bits (418), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 67/424 (15%), Positives = 155/424 (36%), Gaps = 56/424 (13%)

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR 284
              +++L + +  +E    + +  +  + +L        G +     G+ I++ + + + 
Sbjct: 1   MAKEKKLVEEITSMETDFAQWYTDIVLKAELVDY-TSVKGCLVIRPAGYAIWENMKNEID 59

Query: 285 RKIKDDYEEINTPQVLDQHLW--QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
           R+ K+   E     +        +++ H + +   +  V        + R   ++P +  
Sbjct: 60  RRFKETGIENCYLPMFIPESLLQKEADHVEGFAPEVAWVTHGGLEELEER-LCVRPTSET 118

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMF 401
                ++  +KSYR+LP  L ++ SV R E   +    +R R F   + H    T ++  
Sbjct: 119 LFCDYYSKVVKSYRDLPQLLNQWCSVVRWEK--TTRPFLRSREFLWQEGHTIHATAKEAH 176

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
           +  +++  +    ++      ++  + T  EK  G++A +                    
Sbjct: 177 DRTVQMLEVYADFFEKDLAIPVVRGMKTDKEKFAGAEATY-------------------- 216

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHP 520
                             E ++ D  G+  Q GT           F+  + +  ++    
Sbjct: 217 ----------------TIEALMHD--GKALQSGTSHYFGDGFAKAFDVTFTDKDNQIKT- 257

Query: 521 VMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIAN 573
             +    FG   R IG +I    ++    LP  ++P+Q  +  +       +E A ++ N
Sbjct: 258 --VFETSFGVTTRIIGAVIMVHGDDSGLKLPPHIAPVQVNIIPVAAHKEGVLEAANDLKN 315

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            L +  + ++ D   ++  +K  E  ++ IP+ I  G K+         R  +     VS
Sbjct: 316 RLIAAGVRVKLDDSEKSPGFKFAESEMRGIPLRIEIGPKDIENNQCVFVRRDTGEKTFVS 375

Query: 634 LLDA 637
           L + 
Sbjct: 376 LENV 379


>gi|260681819|ref|YP_003213104.1| prolyl-tRNA synthetase [Clostridium difficile CD196]
 gi|260685416|ref|YP_003216549.1| prolyl-tRNA synthetase [Clostridium difficile R20291]
 gi|260207982|emb|CBA60134.1| putative dual-specificity prolyl/cysteinyl-tRNA synthetase
           [Clostridium difficile CD196]
 gi|260211432|emb|CBE01531.1| putative dual-specificity prolyl/cysteinyl-tRNA synthetase
           [Clostridium difficile R20291]
          Length = 510

 Score =  165 bits (418), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 72/429 (16%), Positives = 163/429 (37%), Gaps = 57/429 (13%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
            +++  + +  +E+   + +  +  + DL   A     ++     G+ +++ +  +M +K
Sbjct: 33  NEKQFVEEITKMEDDFPQWYTDVITKTDLVDYAPVKGFMVV-KPYGYALWEKMQEFMDKK 91

Query: 287 IKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
            K+  ++    P ++ + L  +++ H + +   +  V    +   + R   ++P +    
Sbjct: 92  FKETGHKNCYFPLLIPESLLNKEAEHVEGFAPEVAWVTHGGNKKLEER-LCVRPTSETII 150

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNE 403
             ++   LKSYRELP    ++ SV R E S      +R   F   + H    T E+   E
Sbjct: 151 CTMYAKWLKSYRELPYLYNQWCSVVRWEKS--TRPFLRTSEFLWQEGHTLHETAEEAQEE 208

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            ++   +  ++ ++     ++    +  EK  G +  +                      
Sbjct: 209 TIQQLEVYKALCEELLAMPVVAGQKSESEKFAGGERTY---------------------- 246

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVM 522
                           E ++ D  G+  Q GT   +  +    F+  + +      +P  
Sbjct: 247 --------------TIEAMMHD--GKALQSGTSHFLGQHFTKAFDITFADREGNLANP-- 288

Query: 523 IHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSS---AVEYAQEIANLL 575
            +   +G+  R IG +I    +N    LP  ++PIQ ++  I +     +E   +I   L
Sbjct: 289 -YHTSWGASTRLIGGLIMTHSDNRGLVLPPRVAPIQVVIVPIAAKKGNVMETVDKIYADL 347

Query: 576 KSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           K+  +++E D R+  T  +K  E  +K  P+ +  G K+       + R  +     + L
Sbjct: 348 KTKGVAVEVDDRDNYTTGWKFNEWEMKGAPVRVEIGPKDIENNQAMVFRRDTLEKDSMPL 407

Query: 635 LDAIPILTK 643
                 +  
Sbjct: 408 EGLADAICD 416


>gi|300856979|ref|YP_003781963.1| prolyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
 gi|300437094|gb|ADK16861.1| prolyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
          Length = 476

 Score =  165 bits (418), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 66/432 (15%), Positives = 162/432 (37%), Gaps = 63/432 (14%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           ++ + +   +E   + +  + ++ +L   +     +I      + +++ + SY+ ++ K+
Sbjct: 4   KMVEQITSRDEDFAQWYTDIVKKAELADYSSVRGCMII-RPYAYAMWENIQSYLDKRFKE 62

Query: 290 -DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
             ++ +  P  + + L  ++  H + +   +  V    +         ++P +       
Sbjct: 63  TGHQNVYMPLFIPESLLQKEKDHIEGFAPEVAWVTHGGNEEL-TEKLCVRPTSETLFCEH 121

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH-VFCTKEQMFNECLK 406
           +   ++SY++LP    ++ SV R E   +    +R   F   + H +  TK++   E  +
Sbjct: 122 YAKIVQSYKDLPKLYNQWCSVVRWEK--TTRPFLRTTEFLWQEGHTIHETKKEAQEETTR 179

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           + N+   + +      ++    T  EK  G +A +                         
Sbjct: 180 MLNVYADLCEKVLAIPVLKGQKTDSEKFAGGEATY------------------------- 214

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHR 525
                        E ++ D  G+  Q GT      N    F   Y +   +  +   +++
Sbjct: 215 -----------TIEALMHD--GKALQAGTSHYLGQNFAKSFGMQYSDKEGKLQY---VYQ 258

Query: 526 AVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSH 578
             +G   R +G +I    ++    +P  ++P Q I+  I       ++ A E+ + +   
Sbjct: 259 TSWGVTTRLLGAIIMVHGDDNGLVVPPRIAPTQVIIVPIAQHKEGVLDKANELKDRIAKF 318

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
              ++ D  ++   +K  E+ +K +PI +  G K+  +  + + R  S     VS+ +  
Sbjct: 319 -ARVKLDDSDKMAGWKFSEYEMKGVPIRLEVGPKDIEKNQVVLVRRDSGEKIIVSMDNL- 376

Query: 639 PILTKESLPPDC 650
                E   PD 
Sbjct: 377 -----EKDIPDL 383


>gi|159155613|gb|AAI54534.1| LOC562037 protein [Danio rerio]
          Length = 476

 Score =  165 bits (418), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 77/407 (18%), Positives = 139/407 (34%), Gaps = 62/407 (15%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD-QHLWQQSGHWDSYRAN 317
            D SG        + I+  +  +  R+IK    E    P  +    L ++  H   +   
Sbjct: 5   YDVSGCYVLRPWSYSIWDAIKEFFDREIKKLGVENCYFPMFVSQAALEKEKTHIADFAPE 64

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           +  V  +  T       A++P +       +   ++S+R+LP++L ++ +V R E     
Sbjct: 65  VAWVTRSGKTEL-AEPIAVRPTSETVMYPAYAKWVQSHRDLPIKLNQWCNVVRWEFKHP- 122

Query: 378 HGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
              +R R F   + H  F TKE+   E L+I +L   +Y++     ++    T  EK  G
Sbjct: 123 QPFLRTREFLWQEGHTAFATKEEATEEVLQILDLYARVYEELMAIPVVKGRKTEKEKFAG 182

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
            D                                    Y    E     A GR  Q  T 
Sbjct: 183 GD------------------------------------YTTTVE-AFISASGRAIQGATS 205

Query: 497 QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI--- 553
                  SR          +     + ++  +G   R IG++      N+ L L P    
Sbjct: 206 HHLGQNFSRMFEIVFEDPKKPGEKQLAYQNSWGITTRTIGVLTMVHGDNMGLVLPPRVAC 265

Query: 554 -QAIVTTIT----------SSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIK 601
            Q I+                 ++   +  + L+   + ++ D R+  +  +K     +K
Sbjct: 266 LQVIIIPCGITATLPEAEKDLLLDQCSKYLSRLQKADIRVKADLRDNYSPGWKFNHWELK 325

Query: 602 KIPIIIICGDKEASERS-IGIRRFGSTTTQKVSLLDA---IPILTKE 644
            +PI    G K+  +   + +R   +     V   DA   IP L +E
Sbjct: 326 GVPIRFEVGPKDLKQGQFVAVR-RDTGEKITVKEADAEKKIPNLLEE 371


>gi|50419495|ref|XP_458274.1| DEHA2C13706p [Debaryomyces hansenii CBS767]
 gi|49653940|emb|CAG86351.1| DEHA2C13706p [Debaryomyces hansenii]
          Length = 682

 Score =  165 bits (418), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 80/407 (19%), Positives = 143/407 (35%), Gaps = 61/407 (14%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQ-VLDQHLWQQSGHWDSYRAN 317
            D SG        + +++T+  +   R  K   +    P  V  + L ++  H + +   
Sbjct: 206 YDVSGCYILRPNSYSVWETIQEWFNLRIKKMGVQNSYFPMFVSSRVLEKEKDHIEGFAPE 265

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           +  V  A ++  D    A++P +       +   ++S+R+LP++L ++ SV R E     
Sbjct: 266 VAWVTRAGNSELD-EHIAIRPTSETVMYPYYAKWIRSHRDLPLKLNQWNSVVRWEFKHP- 323

Query: 378 HGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
              +R R F   + H    TKE    E  +I +L   IY++     ++    T  EK  G
Sbjct: 324 QPFLRTREFLWQEGHTAHLTKESAAEEVEQILDLYAGIYEELLAVPVVKGKKTENEKFAG 383

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
            D                                    Y    E       GR  Q  T 
Sbjct: 384 GD------------------------------------YTTTCE-GFIAETGRGIQGATS 406

Query: 497 -QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP--- 552
             +  N    FN    N        V   +  +G   R IG+M+     N  L L P   
Sbjct: 407 HHLGTNFSKMFNISVENPEGADKPRVHAFQNSWGLSTRVIGVMVMTHSDNKGLVLPPRVA 466

Query: 553 -IQAIVTTIT----------SSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSI 600
             Q +V  +            +  + A  I ++LK   + +  D+R+  +  +K     +
Sbjct: 467 QTQVVVIPVGLTAKTPDEQRKAINDGAANIEHILKQTDVRVTGDYRDNYSPGWKFSNWEL 526

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA---IPILTKE 644
           K  P+ +  G K+ +   +   R  ++    V L +    IP + +E
Sbjct: 527 KGTPLRLEFGPKDLASEQVTAVRRDNSQKYSVKLNELEKRIPEILQE 573


>gi|157564|gb|AAA28594.1| transfer RNA-Glu-Pro aminoacyl synthetase [Drosophila melanogaster]
 gi|1871360|gb|AAC47469.1| glutamyl-prolyl-tRNA synthetase [Drosophila melanogaster]
          Length = 1714

 Score =  165 bits (418), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 76/393 (19%), Positives = 136/393 (34%), Gaps = 62/393 (15%)

Query: 273  WKIFQTLISYMRRKIKD-DYEEINTPQ-VLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            + I++ + ++   +I     +E   P  V    L ++  H   +   +  V  + D+   
Sbjct: 1254 FAIWKAIKTWFDAEITRMGVKECYFPIFVSKAVLEKEKTHIADFAPEVAWVTKSGDSDL- 1312

Query: 331  LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
                A++P +       +   ++SYR+LP+RL ++ +V R E        +R R F   +
Sbjct: 1313 AEPIAVRPTSETVMYPAYAKWVQSYRDLPIRLNQWNNVVRWEFKQPT-PFLRTREFLWQE 1371

Query: 391  AHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMK 449
             H  F  KE+   E L I +L   +Y       ++    T  EK  G D           
Sbjct: 1372 GHTAFADKEEAAKEVLDILDLYALVYTHLLAIPVVKGRKTEKEKFAGGD----------- 1420

Query: 450  GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAF 509
                                     Y    E     A GR  Q  T        S+    
Sbjct: 1421 -------------------------YTTTVE-AFISASGRAIQGATSHHLGQNFSKMFEI 1454

Query: 510  YVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTTITSSA- 564
                  +      +++  +G   R IG+MI     N  L L P    IQAIV     +  
Sbjct: 1455 VYEDPEKTQQKKYVYQNSWGITTRTIGVMIMVHADNQGLVLPPHVACIQAIVVPCGITVN 1514

Query: 565  ---------VEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEA 614
                     ++  + +   L    +  E D+R+  +  +K     +K +P+ +  G K+ 
Sbjct: 1515 TKDDERAQLLDACKALEKRLVGGGVRCEGDYRDNYSPGWKFNHWELKGVPLRLEVGPKDL 1574

Query: 615  SERS-IGIRRFGSTTTQKVSLLDA---IPILTK 643
              +  + +R   +     + L D    IP L +
Sbjct: 1575 KAQQLVAVR-RDTGEKITIPLADVEKKIPALLE 1606


>gi|291518260|emb|CBK73481.1| prolyl-tRNA synthetase, family I [Butyrivibrio fibrisolvens 16/4]
          Length = 479

 Score =  165 bits (417), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 71/426 (16%), Positives = 152/426 (35%), Gaps = 59/426 (13%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
           + E   + +  +  + DL   +     +I     G+ I++ +   + R+ K+   + +  
Sbjct: 14  MSEDFAQWYTDVVVKADLIAYSSVKGCMII-KPDGYAIWENIQHELDRRFKETGVQNVYM 72

Query: 297 PQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P  + + L Q +  H + +   +  V          R   ++P +       +   + S+
Sbjct: 73  PMFIPESLLQVEKDHVEGFAPEVAWVTHGGLNPLQER-LCVRPTSETLFCDFYKDIIHSH 131

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA-HVFCTKEQMFNECLKIHNLIISI 414
           R+LP    ++ SV R E        +R R F   +      T E+     +++ NL    
Sbjct: 132 RDLPKVYNQWCSVVRWEK--ETRPFLRSREFLWQEGHTAHATAEEAEERTVQMLNLYADF 189

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            ++     ++    T  EK  G++A +                                 
Sbjct: 190 CEEVLAMPVVRGQKTDKEKFAGAEATY--------------------------------- 216

Query: 475 YGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
                E ++ D  G+  Q GT      N    F   Y + +++  +   +H+  +G   R
Sbjct: 217 ---TIEALMHD--GKALQSGTSHNFGQNFSKPFGIQYTDKNNQLQY---VHQTSWGMTTR 268

Query: 534 FIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDF 586
            IG +I    ++    LP  ++P Q +V  I       +E A E+   L    +  + D 
Sbjct: 269 LIGAIIMVHGDDSGLVLPPRIAPTQVVVIPIQQKKEGVLEKAGEVCEKLGKT-MRAKLDD 327

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK--E 644
            +++  +K  E  ++ IP+ +  G K+       + R  +    +  L      + +  E
Sbjct: 328 SDKSPGWKFSEAEMRGIPVRVELGPKDIEAGKCVLVRRDTREKIECPLDQVETKVAELLE 387

Query: 645 SLPPDC 650
           ++  D 
Sbjct: 388 TIQKDM 393


>gi|195504997|ref|XP_002099319.1| GE10841 [Drosophila yakuba]
 gi|194185420|gb|EDW99031.1| GE10841 [Drosophila yakuba]
          Length = 996

 Score =  165 bits (417), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 78/394 (19%), Positives = 141/394 (35%), Gaps = 65/394 (16%)

Query: 273 WKIFQTLISYMRRKIKD-DYEEINTPQ-VLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           + I++ + ++   +I     +E   P  V    L ++  H   +   +  V  + D+   
Sbjct: 537 FAIWKAIKTWFDAEITRMGVKECYFPIFVSKAVLEKEKTHIADFAPEVAWVTKSGDSDL- 595

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
               A++P +       +   ++SYR+LP+RL ++ +V R E        +R R F   +
Sbjct: 596 AEPIAVRPTSETVMYPAYAKWVQSYRDLPIRLNQWNNVVRWEFKQPT-PFLRTREFLWQE 654

Query: 391 AHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMK 449
            H  F  KE+   E L I +L   +Y       ++    T  EK  G D           
Sbjct: 655 GHTAFADKEEAAKEVLDILDLYALVYTHLLAIPVVKGRKTEKEKFAGGD----------- 703

Query: 450 GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNA 508
                                    Y    E     A GR  Q  T   +  N    F  
Sbjct: 704 -------------------------YTTTVE-AFISASGRAIQGATSHHLGQNFSKMFEI 737

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTTITSSA 564
            Y +  +++     +++  +G   R IG+MI     N  L L P    IQAIV     + 
Sbjct: 738 VYEDPETQQKK--YVYQNSWGLTTRTIGVMIMVHADNQGLVLPPHVACIQAIVVPCGITV 795

Query: 565 ----------VEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKE 613
                     ++  + +   L    +  E D+R+  +  +K     +K +P+ +  G K+
Sbjct: 796 NTKDDERAQLLDACKALEKRLVGGGVRCEGDYRDNYSPGWKFNHWELKGVPLRLEVGPKD 855

Query: 614 ASERS-IGIRRFGSTTTQKVSLLDA---IPILTK 643
              +  + +R   +     + L D    IP L +
Sbjct: 856 LKAQQLVAVR-RDTGEKITIPLADVEKKIPALLE 888


>gi|307565532|ref|ZP_07628012.1| proline--tRNA ligase [Prevotella amnii CRIS 21A-A]
 gi|307345691|gb|EFN91048.1| proline--tRNA ligase [Prevotella amnii CRIS 21A-A]
          Length = 493

 Score =  165 bits (417), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 69/438 (15%), Positives = 155/438 (35%), Gaps = 73/438 (16%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
              ++  + +  L  + DL   +     ++     G+ I++ +   + +  K    +   
Sbjct: 10  KRADNYSQWYNDLVVKADLAEQSAVRGCMVI-KPYGYAIWENIQGQLDKMFKATGVQNAY 68

Query: 296 TPQVLDQHLW-QQSGHWDSYRANMFAVKCA-------------DDTIKDLRTFALKPMNC 341
            P ++ +    +++ H + +      V                D   K      ++P + 
Sbjct: 69  FPLLIPKSFLSREAEHVEGFAKEAAVVTHYRLKTKENGEGVEVDPNAKLEEELIIRPTSE 128

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
                 + + + S+R+LP+   ++ +V R E        +R   F   + H   T     
Sbjct: 129 TIIWNTYKNWIHSWRDLPLMCNQWCNVMRWEMR--TRPFLRTSEFLWQEGH---TAHATK 183

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E  +   L++ +Y DF                         AE  +             
Sbjct: 184 QEAEEEAKLMLKVYADF-------------------------AEKWLA-------VPVIQ 211

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHP 520
            + +      GA      E +++D  G+  Q GT   +  N    F+  ++N  ++   P
Sbjct: 212 GVKSETERFAGALDTYTIEAMMQD--GKALQSGTSHFLGQNFAKSFDVTFLNKENK---P 266

Query: 521 VMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI--TSSAVEYAQE---- 570
             +    +G   R IG +I    ++    LP  ++PIQ ++  I      +E  +     
Sbjct: 267 EYVWATSWGVSTRLIGALIMTHSDDNGLVLPPKIAPIQVVIIPIFKGEEQLEQLKNKLQP 326

Query: 571 IANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           + + L+   ++++ D   N+   +K  ++ +K +P+ +  G ++    +I + R  +   
Sbjct: 327 VIDELREAGVTVKFDDSDNKRPGFKFADYELKGVPVRLAMGGRDLENNTIEVMRRDTLEK 386

Query: 630 QKVSLL---DAIPILTKE 644
           + VS     D I  L  E
Sbjct: 387 ESVSFDGITDYIKHLLDE 404


>gi|329943295|ref|ZP_08292069.1| threonyl and Alanyl tRNA synthetase second additional domain
           protein [Chlamydophila psittaci Cal10]
 gi|328814842|gb|EGF84832.1| threonyl and Alanyl tRNA synthetase second additional domain
           protein [Chlamydophila psittaci Cal10]
          Length = 236

 Score =  165 bits (417), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 73/222 (32%), Positives = 111/222 (50%), Gaps = 6/222 (2%)

Query: 16  NFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIR 74
             P   T +D A  I  S     V   IN ++ DLS  + EG ++  +T  DP    +  
Sbjct: 12  ELPEGTTAADFASKIKNSHYFAGVV--INDQIKDLSTTLNEGDTLRFVTFTDPEGREIFL 69

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDS 134
           H+ AHI+A+A+  +WP+    IGP+I+ GFYYDF      S D+   IE  M +I     
Sbjct: 70  HTSAHILAQAILRLWPDAIPTIGPVIDQGFYYDFA-NLSISEDDFLMIENMMGQISEAKF 128

Query: 135 PFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQV 194
              K+  ++++   L E     +KVE+++ +P  E++T Y QGE+ DLCRGPH+ ST  V
Sbjct: 129 AVQKKTFNNKQ-EALNEFANNPFKVELIQELPEGESITAYSQGEFMDLCRGPHLPSTAPV 187

Query: 195 KKFFKLMKVAGAYWRGDSNRPMLSRI-YGTAWNTQQELTQYL 235
           K F  L   A  +  G S R     +  G  ++ + + T   
Sbjct: 188 KAFKLLRTSAAYWRGGSSKRIFSKNLWCGFPYDKRIKRTSTP 229


>gi|300712094|ref|YP_003737908.1| prolyl-tRNA synthetase [Halalkalicoccus jeotgali B3]
 gi|299125777|gb|ADJ16116.1| prolyl-tRNA synthetase [Halalkalicoccus jeotgali B3]
          Length = 482

 Score =  165 bits (417), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 63/411 (15%), Positives = 134/411 (32%), Gaps = 56/411 (13%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
             + ++ R+  L   A  G  ++    +G+ +++ +   +    K+   +    P  + +
Sbjct: 19  EWYAEVVRKAKLADYAPMGGFIVT-RPRGYALWEAIQDRLDGWFKETGVQNAYFPLFIPE 77

Query: 303 HLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
              + +    + +   +  V        + R  A++P +        +  ++S+R+LP+R
Sbjct: 78  SYLEREKDVVEGFDPEVAWVTQGGHDELEER-LAVRPTSESIIAPFLSQWVRSHRDLPLR 136

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           + ++ SV R E +       R + F   + H                             
Sbjct: 137 VNQWCSVVRWEAT-ETKPFFRTKEFLWQEGHTAHRDHDDAW------------------- 176

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
                           D      E   +   D +                GA      E 
Sbjct: 177 ----------------DETMLRLEQYEQVYEDVLAIPVMRGRKPEHDKFPGADTTTTVEA 220

Query: 482 ILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           ++ D  G+  Q GT   +  +    F+  YV+   E+    + H   +G   R IG +I 
Sbjct: 221 LMPD--GKSVQGGTSHHLGQSFAEAFDITYVDEDEEE---TVAHTTSWGLSWRAIGALIM 275

Query: 541 NFKGNLPLWL----SPIQAIVTTI-----TSSAVEYAQEIANLLKSHHLSIETDFRNET- 590
               +  L L    +P Q ++  I         +EY++ IA+ L+     +E D R+E  
Sbjct: 276 THSDDQGLVLPPTVAPEQVVIVPIWQEENREEVLEYSEGIADDLEEAGFRVELDDRDERN 335

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
             +K  E  +   P+ +  G  E  +  +       +          +  +
Sbjct: 336 PGFKFNEWELLGTPLRLEIGPHEVEDGEVTAVHRPDSEKSVEGREGIVEAV 386


>gi|206901980|ref|YP_002250545.1| prolyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
 gi|206741083|gb|ACI20141.1| prolyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
          Length = 480

 Score =  165 bits (417), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 75/430 (17%), Positives = 159/430 (36%), Gaps = 63/430 (14%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
            +E   + + ++  + DL   +     ++     G+ I++ +   +  KIK   +     
Sbjct: 12  QKEDFSKWYTEVVLKADLVDYSPVKGCMVI-KPYGYAIWENMQRILDEKIKATGHVNAYF 70

Query: 297 PQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P  + +   + ++ H + +   +  V    D        A++P +     ++++  ++S+
Sbjct: 71  PLFIPKSFLEKEAEHVEGFSPQVAWVTKGGDEEL-FEPLAVRPTSEAIICSMYSKWIQSW 129

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISI 414
           R+LPV + ++ +V R E        +R   F   + H      E+   E L++ N+    
Sbjct: 130 RDLPVLINQWANVVRWEK--ETRPFLRTTEFLWQEGHTAHRTFEEAEEEALRMLNVYKDF 187

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            ++     ++    T  EK  G                                    A 
Sbjct: 188 VENDLAIPVIAGRKTENEKFAG------------------------------------AL 211

Query: 475 YGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           +    E +L D  GR  Q GT   +  +    F+  + +   E+ +   + +  +G   R
Sbjct: 212 HTYSIEVLLAD--GRALQAGTSHNLGQHFAKAFDIMFQDVDGERKY---VWQTSWGVSTR 266

Query: 534 FIGIMIENFKGNLPLWL----SPIQAIVTTI------TSSAVEYAQEIANLLKSHHLSIE 583
            IG +I     +  L L    +P Q ++  I       +    Y  EI  +L+ +   ++
Sbjct: 267 LIGALIMTHGDDYGLVLPPRVAPYQIVIIPIWKSETDKTKVYNYVDEIYEVLRKY-FRVK 325

Query: 584 TDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            D   E T  +K  E  +K +P+ +  G KE  ++ + + R        +   + +  L 
Sbjct: 326 VDKDEEHTPGWKFNEWELKGVPVRVEIGPKEVEKQELYVARRDLRIKMSIKRENMVQDL- 384

Query: 643 KESLPPDCQK 652
            E+L  D QK
Sbjct: 385 -ENLLRDIQK 393


>gi|66267550|gb|AAH94679.1| Eprs protein [Mus musculus]
          Length = 1477

 Score =  165 bits (417), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 74/437 (16%), Positives = 147/437 (33%), Gaps = 60/437 (13%)

Query: 226  NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
              +Q         EE+    + ++  + ++     D SG        + I++++  +   
Sbjct: 973  PKKQTRLGLEAKKEENLAEWYSQVITKSEMIEY-YDVSGCYILRPWSYSIWESIKDFFDA 1031

Query: 286  KIKD-DYEEINTPQVLD-QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPG 343
            +IK    E    P  +    L ++  H + +   +  V  +  T       A++P +   
Sbjct: 1032 EIKKLGVENCYFPIFVSQAALEKEKNHIEDFAPEVAWVTRSGKTEL-AEPIAIRPTSETV 1090

Query: 344  HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFN 402
                +   ++S+R+LPVRL ++ +V R E        +R R F   + H  F T E+  +
Sbjct: 1091 MYPAYAKWVQSHRDLPVRLNQWCNVVRWEFKHP-QPFLRTREFLWQEGHSAFATFEEAAD 1149

Query: 403  ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
            E L+I  L   +Y++     ++    T  EK  G D                        
Sbjct: 1150 EVLQILELYARVYEELLAIPVVRGRKTEKEKFAGGD------------------------ 1185

Query: 463  INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
                        Y    E     A GR  Q  T        S+                 
Sbjct: 1186 ------------YTTTIE-AFISASGRAIQGATSHHLGQNFSKMCEIVFEDPKTPGEKQF 1232

Query: 523  IHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTT----------ITSSAVEYA 568
             ++  +G   R IG+M+     ++ L L P    +Q +V               + +   
Sbjct: 1233 AYQCSWGLTTRTIGVMVMVHGDSMGLVLPPRVASVQVVVIPCGITNALSEEDREALMAKC 1292

Query: 569  QEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERS-IGIRRFGS 626
             E    L   ++ +  D R+  +  +K     +K +P+ +  G ++      + +R   +
Sbjct: 1293 NEYRRRLLGANIRVRVDLRDNYSPGWKFNHWELKGVPVRLEVGPRDMKSCQFVAVR-RDT 1351

Query: 627  TTTQKVSLLDAIPILTK 643
                 ++  +A   L K
Sbjct: 1352 GEKLTIAEKEAEAKLEK 1368


>gi|297184115|gb|ADI20234.1| hypothetical protein [uncultured Sphingobacterium sp. EB080_L08E11]
          Length = 501

 Score =  165 bits (417), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 75/451 (16%), Positives = 166/451 (36%), Gaps = 73/451 (16%)

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYM 283
           ++  +  + ++L   E    + + +L  + DL   +     ++     G+ I++ + + +
Sbjct: 4   SYTKRNYMAKHLTTREADYSKWYNELVVKADLAQNSGVRGSMVI-KPYGFAIWERIQADL 62

Query: 284 RRKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCA-------------DDTI 328
            R+ K+  +     P  + +  + +++ H D +      V                D + 
Sbjct: 63  DRRFKETGHMNAYFPLFIPKSYFSKEASHVDGFAKECAVVTHYRLMDDPNGGGVVVDPSA 122

Query: 329 KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQ 388
           K      ++P +       +   ++SYR+LP+ + ++ +V R E        +R   F  
Sbjct: 123 KLEEELIVRPTSETIIWDTYKDWIQSYRDLPILVNQWANVVRWEMR--TRLFLRTAEFLW 180

Query: 389 DDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIM 448
            + H   T      E +     ++ +Y DF                              
Sbjct: 181 QEGH---TAHATKQEAITEAETMLDVYTDF------------------------------ 207

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFN 507
             V D +       + T      GA      E +++D  G+  Q GT   +  N    F 
Sbjct: 208 --VQDVMAIPVLRGLKTEGERFAGALETYCIEALMQD--GKALQAGTSHFLGQNFAKAFE 263

Query: 508 AFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSS 563
             + N   ++ +   +    +G   R +G +I    ++    LP  L+P Q ++  I   
Sbjct: 264 VKFQNKEGKQEY---VWATSWGVSTRLMGALIMTHSDDNGLVLPPKLAPYQVVIVPIYKG 320

Query: 564 AV------EYAQEIANLLKSHHLSIETDFRN-ETINYKIREHSIKKIPIIIICGDKEASE 616
                   E A+++   L++  ++++ D R+     +K  ++ ++ IP+ I  G K+  +
Sbjct: 321 QEQLDAISEVAEDLMGQLRAQGITVKYDNRDTHKPGWKFNQYELQGIPLRIAIGPKDLEK 380

Query: 617 RSIGIRRFGSTTTQKVSLLDA---IPILTKE 644
            S+ + R  + T Q V   +    +P L  E
Sbjct: 381 GSVELARRDTLTKQFVDQKEVSTKVPELLDE 411


>gi|193216362|ref|YP_001997561.1| prolyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110]
 gi|259511584|sp|B3QYP1|SYP_CHLT3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|193089839|gb|ACF15114.1| prolyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110]
          Length = 481

 Score =  165 bits (417), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 66/422 (15%), Positives = 156/422 (36%), Gaps = 58/422 (13%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
             +   + +  + R   L   ++    ++     G+ I++ + + + R  K+  +     
Sbjct: 8   RAQDYSQWYIDIVRFAKLADYSDVRGCMVI-RPNGYAIWEKMQAALDRMFKETGHVNAYF 66

Query: 297 PQVLDQHL-WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P  + +    +++ H + +      V          + + ++P +     + +   ++SY
Sbjct: 67  PLFIPESFIQKEAEHIEGFAPECAVVTHGGGEELQEKLY-VRPTSETIIWSSYKKWIQSY 125

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE-QMFNECLKIHNLIISI 414
           R+LP+ + ++ +V R E        +R   F   + H     E +   E L++  +    
Sbjct: 126 RDLPILINQWANVVRWEMR--TRLFLRTTEFLWQEGHTAHATETEAKEEVLRMIEVYRHF 183

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            +++    ++V + T  EK  G+   +                                 
Sbjct: 184 AEEYMAIPVIVGMKTESEKFAGAHETF--------------------------------- 210

Query: 475 YGPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
                E +++D  G+  Q GT   +  N    F+  +        +   +  + +G   R
Sbjct: 211 ---CIEAMMQD--GKALQAGTSHHLGQNFAKAFDCKFQTKDGSLEY---VWASSWGVSTR 262

Query: 534 FIGIMIENFKGNLPLWLSP----IQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETD 585
            IG +I     +  L L P     QA++  I     ++ +E A E+  +LK+  + +  D
Sbjct: 263 LIGALIMAHSDDKGLVLPPKLASRQAVIVPILKGDKAAVLEKAVELEKMLKAAGVQVFLD 322

Query: 586 FRN-ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
                T  +K  E+ ++ IP+ I  G ++ +     + R  ++  + + +  A P   K+
Sbjct: 323 DSEQNTPGWKFAEYELQGIPVRIELGPRDVAAGKCVVARRDTSEKETLEIDTAFPQKIKD 382

Query: 645 SL 646
            L
Sbjct: 383 LL 384


>gi|195441810|ref|XP_002068665.1| GK18335 [Drosophila willistoni]
 gi|298206800|ref|YP_003714979.1| prolyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
 gi|83849432|gb|EAP87300.1| prolyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
 gi|194164750|gb|EDW79651.1| GK18335 [Drosophila willistoni]
          Length = 492

 Score =  165 bits (417), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 66/432 (15%), Positives = 164/432 (37%), Gaps = 73/432 (16%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
             E   + + +L  + DL   +     ++     G+ I++ + + + ++ K+  ++    
Sbjct: 8   RNEDYSKWYNELVVQADLAENSAVRGCMVI-KPYGYAIWEKMQAQLDKRFKETGHQNAYF 66

Query: 297 PQVLDQHLWQ-QSGHWDSYRANMFAVKCA--------------DDTIKDLRTFALKPMNC 341
           P  + + L++ +  + + +      V                 D   K      ++P + 
Sbjct: 67  PLFVPKSLFEAEEKNAEGFAKECAVVTHYRLKTDENNPGKLIVDPEAKLEEELVVRPTSE 126

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQM 400
                 +   ++SYR+LP+ + ++ +V R E        +R   F   + H    T+E+ 
Sbjct: 127 AIIWNTYKGWIQSYRDLPLLINQWANVVRWEMR--TRLFLRTAEFLWQEGHTAHATREEA 184

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQ 460
             E  +++N+     ++F    ++    T  E+  G+   +                   
Sbjct: 185 LAETEQMNNIYAEFVENFMAIPVIKGAKTESERFAGAVETY------------------- 225

Query: 461 DRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCH 519
                              E +++D  G+  Q GT   +  N    F+  + +   ++ +
Sbjct: 226 -----------------CIEALMQD--GKALQAGTSHFLGQNFAEAFDVKFTSKEGKQEY 266

Query: 520 PVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTIT------SSAVEYAQ 569
              +  + +G   R +G +I    ++    LP  L+PIQ ++  I       ++  E A+
Sbjct: 267 ---VWASSWGVSTRLMGALIMTHSDDKGLVLPPNLAPIQVVIVPIYRNDEQFNAISEEAK 323

Query: 570 EIANLLKSHHLSIETDFRN-ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
            +   L++  +S++ D R+     +K  ++ ++ +P+ I  G K+    ++ + R  + T
Sbjct: 324 LLTEELRAVGISVKFDGRDTHKPGWKFAQYELQGVPLRIAIGPKDLENGTVELARRDTLT 383

Query: 629 TQKVSLLDAIPI 640
            + V   D +  
Sbjct: 384 KEFVKREDVVAK 395


>gi|218260218|ref|ZP_03475604.1| hypothetical protein PRABACTJOHN_01265 [Parabacteroides johnsonii
           DSM 18315]
 gi|218224670|gb|EEC97320.1| hypothetical protein PRABACTJOHN_01265 [Parabacteroides johnsonii
           DSM 18315]
          Length = 526

 Score =  165 bits (417), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 75/465 (16%), Positives = 168/465 (36%), Gaps = 81/465 (17%)

Query: 217 LSRIYGTAWNTQQELTQYLYFLEESEK------RDHRKLAREMDLFHIAEDGSGVIFWHR 270
           L  I+G      +   +    L+E         + ++ L  + DL   +     ++    
Sbjct: 17  LHVIFGINRKKHKNYKEMAKELKELTPRSVNYSQWYQDLVIKADLAENSAVRGCMVI-KP 75

Query: 271 KGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCA---- 324
            G+ I++ +   +    K+  +     P ++ +    +++ H + +      V       
Sbjct: 76  YGYAIWEKMQRILDDMFKETGHVNAYFPLLIPKSFLSKEAEHVEGFAKECAVVTHYRLKT 135

Query: 325 ---------DDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
                    D   K      ++P +       + + ++SYR+LP+   ++ +V R E   
Sbjct: 136 NHDGTGVVVDPAAKLEEELIIRPTSETIIWNTYRNWIQSYRDLPILCNQWANVMRWEMR- 194

Query: 376 SLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
                +R   F   + H    T+E+   E  K+  +     +++    ++  + +  E+ 
Sbjct: 195 -TRLFLRTAEFLWQEGHTAHATREEAEIEAKKMQGVYADFAENYMAMPVVKGVKSASERF 253

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
            G                                    A      E +++D  G+  Q G
Sbjct: 254 AG------------------------------------ALDTYTIEAMMQD--GKALQAG 275

Query: 495 TIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLW 549
           T   +  N    F+  +++ + +  +        +G   R IG +I    ++    LP  
Sbjct: 276 TSHFLGQNFGKAFDVTFIDKNGKNEYAWA---TSWGVSTRLIGALIMSHSDDNGLVLPPH 332

Query: 550 LSPIQAIVTTITSSAVEYAQE------IANLLKSHHLSIETDF-RNETINYKIREHSIKK 602
           L+PIQ ++  I  SA + AQ       I   LK+  +S++ D   N+   +K  E+ +K 
Sbjct: 333 LAPIQVVIIPIYRSAEQLAQISEKVNGIVAKLKALGISVKFDDADNKKPGWKFAEYELKG 392

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVS---LLDAIPILTKE 644
           +P+ +  G ++    +I + R  +   + V+   +   +  L +E
Sbjct: 393 VPVRLAMGGRDLENNTIEVMRRDTLEKETVTCDNIETYVQNLLEE 437


>gi|195144990|ref|XP_002013479.1| GL24160 [Drosophila persimilis]
 gi|194102422|gb|EDW24465.1| GL24160 [Drosophila persimilis]
          Length = 1725

 Score =  165 bits (417), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 74/390 (18%), Positives = 139/390 (35%), Gaps = 62/390 (15%)

Query: 273  WKIFQTLISYMRRKIKD-DYEEINTPQ-VLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            + I++ +  +   +I     +E   P  V    L ++  H   +   +  V  + D+   
Sbjct: 1266 FAIWKFIKQWFDAEITRMGVKECYFPIFVSKAVLEKEKTHIADFAPEVAWVTKSGDSDL- 1324

Query: 331  LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
                A++P +       +   ++SYR+LP+RL ++ +V R E        +R R F   +
Sbjct: 1325 AEPIAVRPTSETVMYPAYAKWIQSYRDLPIRLNQWNNVVRWEFKHP-QPFLRTREFLWQE 1383

Query: 391  AHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMK 449
             H  F ++E+   E L I +L   +Y       ++    T  EK  G D           
Sbjct: 1384 GHTAFASQEEAVKEVLDILDLYALVYTHLLAIPVVKGRKTEKEKFAGGD----------- 1432

Query: 450  GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNA 508
                                     Y    E     A GR  Q  T   +  N    F  
Sbjct: 1433 -------------------------YTTTVE-AFISASGRAIQGATSHHLGQNFSKMFEI 1466

Query: 509  FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTTITSSA 564
             Y +  +++     + +  +G   R IG+MI     N  L L P    IQAIV     + 
Sbjct: 1467 VYEDPETQQKK--YVFQNSWGITTRTIGVMIMVHADNQGLVLPPNVACIQAIVVPCGITV 1524

Query: 565  ----------VEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKE 613
                      ++  +++   L    +  E D+R+  +  +K     +K +P+ +  G K+
Sbjct: 1525 NTKDEERAQLLDACKKLEQTLVGAGVRCEGDYRDNYSPGWKFNHWELKGVPLRLEVGPKD 1584

Query: 614  ASERS-IGIRRFGSTTTQKVSLLDAIPILT 642
               +  + +R   +     + L D    ++
Sbjct: 1585 LKAQQLVAVR-RDTGEKITLPLADVEKKIS 1613


>gi|55377088|ref|YP_134938.1| prolyl-tRNA synthetase [Haloarcula marismortui ATCC 43049]
 gi|74579418|sp|Q5V5H0|SYP_HALMA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|55229813|gb|AAV45232.1| proline-tRNA synthetase [Haloarcula marismortui ATCC 43049]
          Length = 484

 Score =  165 bits (417), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 64/388 (16%), Positives = 128/388 (32%), Gaps = 57/388 (14%)

Query: 270 RKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH-LWQQSGHWDSYRANMFAVKCADDT 327
            +G+ I++ + + +    KD   +    P  + +  L ++    + +   +  V      
Sbjct: 44  PRGYAIWERIQNNLDGWFKDTGVQNAYFPLFIPESYLEKEKDVVEGFDPEVAWVTHGGHN 103

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
             + R  A++P +            +S+R+LP+RL ++ SV R E +       R + F 
Sbjct: 104 ELEER-LAVRPTSESIIAPFMAQWTRSHRDLPMRLNQWCSVVRWEAT-ETKPFFRTKEFL 161

Query: 388 QDDAHVFCTKEQMFN-ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
             + H     E     E +   +    +Y++      +       +K             
Sbjct: 162 WQEGHTAHADEDGAWEETMTRLDQYARLYEEVMAMPPLKGRKPPHDKF------------ 209

Query: 447 IMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV-DFNLPSR 505
                                    GA      E ++ D  G+  Q  T      +    
Sbjct: 210 ------------------------PGAHTTTTIETLMPD--GKTVQAATSHYLGTSFGEA 243

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNL----PLWLSPIQAIVTTI- 560
           F+  Y ++  E+      H   +G   R +G +I     +     P  L+P Q +V  I 
Sbjct: 244 FDITYADADEEENTA---HTTSWGLSWRAMGALIMTHSDDQGLVLPPALAPDQVVVVPIW 300

Query: 561 ----TSSAVEYAQEIANLLKSHHLSIETDFRNET-INYKIREHSIKKIPIIIICGDKEAS 615
                   ++YA ++A  L    + +E D R      +K  EH +  +P+ +  G  E  
Sbjct: 301 QEDNKDEVIDYAADLAAELDEADVRVELDDREHRNPGFKYNEHELHGVPLRVEIGPHEVE 360

Query: 616 ERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +    +       T+ V        +T 
Sbjct: 361 DGEATLVHRPDGETETVDRDGIADTVTD 388


>gi|312885526|ref|ZP_07745164.1| prolyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603]
 gi|311301994|gb|EFQ79025.1| prolyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603]
          Length = 490

 Score =  165 bits (417), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 74/405 (18%), Positives = 158/405 (39%), Gaps = 73/405 (18%)

Query: 270 RKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCA--- 324
             G+ I++ + S + +  KD  +     P  + +  + +++ H + +      V      
Sbjct: 39  PYGYSIWEKMQSVLDQMFKDTGHSNAYFPLFIPKSFFSKEASHVEGFAKECAVVTHYRLK 98

Query: 325 ---------DDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
                    D+T K      ++P +       +   ++SYR+LP+ + ++ +V R E   
Sbjct: 99  NDGEGNIIVDETAKLEEELIVRPTSETIIWNTYRGWIQSYRDLPLLINQWANVVRWEMR- 157

Query: 376 SLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
                +R   F   + H    T E+   E  ++ ++                        
Sbjct: 158 -TRLFLRTTEFLWQEGHTAHATAEEAIAETEQMLHVYA---------------------- 194

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
                  D AEN +   +   + ++ +R         GA      E +++D  G+  Q G
Sbjct: 195 -------DFAENWLALPVVRGRKTANERF-------AGALDTYCIEALMQD--GKALQAG 238

Query: 495 TIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLW 549
           T   +  N    F+  + +   ++     +    +G   R +G ++    ++    LP  
Sbjct: 239 TSHFLGQNFAKAFDVKFTSKEGKQE---FVWATSWGVSTRLMGALVMAHSDDSGLVLPPK 295

Query: 550 LSPIQAIVTTITSSAVEYAQ--EIAN----LLKSHHLSIETDFRN-ETINYKIREHSIKK 602
           L+PIQ ++  I  S  E AQ  E+A+     LK+ ++ ++ D R+ +   +K  E+ +K 
Sbjct: 296 LAPIQVVIVPIFRSEEELAQISEVADALSKALKAKNIRVKYDNRDTQRPGFKFAEYELKG 355

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKV---SLLDAIPILTKE 644
           IP+ +  G ++ +  ++ + R  + T + V    L + I  L  E
Sbjct: 356 IPLRVAIGGRDLANGTVELARRDTKTKETVQQQGLAEQIEQLLVE 400


>gi|260900771|ref|ZP_05909166.1| threonine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
 gi|308110613|gb|EFO48153.1| threonine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
          Length = 134

 Score =  165 bits (417), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 50/131 (38%), Positives = 83/131 (63%), Gaps = 2/131 (1%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPE 65
           +T PDGS + F    +  +VA+SI   LAK  +A  +NG   D  D +  + S+EIIT +
Sbjct: 4   ITLPDGSQRQFDNPVSTMEVAQSIGPGLAKATIAGRVNGSRVDACDLIEEDASLEIITVK 63

Query: 66  DP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           D    L ++RHSCAH++  A++ ++P+ ++AIGP I++GFYYD D ++  + ++L +IEK
Sbjct: 64  DEVDGLEIVRHSCAHLLGHALKQLYPQAKMAIGPTIDNGFYYDIDLDESLTQEDLEKIEK 123

Query: 125 KMQEIIARDSP 135
           +M+E+      
Sbjct: 124 RMKELAKTKYE 134


>gi|295101509|emb|CBK99054.1| prolyl-tRNA synthetase [Faecalibacterium prausnitzii L2-6]
          Length = 479

 Score =  164 bits (416), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 79/437 (18%), Positives = 158/437 (36%), Gaps = 59/437 (13%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
             ++L Q +   EE+  + +  +  + +L   +    G I     G  I++ +   M  +
Sbjct: 4   DNKKLVQAITSQEENFAQWYTDICVKAELVEYSSVK-GFIILRPYGQAIWELIQKDMDAR 62

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDS-YRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
            K   +E +  P ++ + L Q+ G   + +   +  V        + R  A++P +    
Sbjct: 63  FKATGHENVAMPVLIPESLLQKEGELVNGFAPEVAWVTMGGSDKLEER-LAVRPTSETMF 121

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
              ++  L SYRELP++  ++ SV R E   +    +R R F   + H            
Sbjct: 122 CDHWSRVLHSYRELPMKYNQWCSVVRWEK--TTRPFLRSREFWWQEGHTIHETAAEAEAE 179

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            +      +                            D  E  +   +   + + +++  
Sbjct: 180 TQQQLNCYA----------------------------DVCEQDLAIPVVKGRKTDKEKF- 210

Query: 465 TGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMI 523
                  GA      E ++KD  G+  Q GT           ++  +    ++  HP   
Sbjct: 211 ------AGAEATYTIEAMMKD--GKALQSGTSHYFGDKFSKAYDVTFTGRDNQLHHPF-- 260

Query: 524 HRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTI---TSSAVEYAQEIANLLK 576
            +  +G   R +G +I     +    LP  ++PIQ +V  I        E A E+A  + 
Sbjct: 261 -QTSWGVSTRLVGAIIMTHGDDDGLILPPAVAPIQVVVVPIAAHKPGVSEKAAELAEKIS 319

Query: 577 SHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
            +   ++ D  +    +K  +  +K +P+ +  G K+  +    + R  +     VSL +
Sbjct: 320 KY-ARVKLDDSDNAPGWKFSQWEMKGVPLRLEIGPKDLEKNQCVLVRRDTREKVFVSLDE 378

Query: 637 ---AIPILTKESLPPDC 650
              AIP    E+L  D 
Sbjct: 379 LETAIPA-QLEALRKDL 394


>gi|66793366|ref|NP_001019409.1| bifunctional aminoacyl-tRNA synthetase [Rattus norvegicus]
 gi|37654316|gb|AAQ96263.1| LRRGT00050 [Rattus norvegicus]
          Length = 1486

 Score =  164 bits (416), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 74/436 (16%), Positives = 143/436 (32%), Gaps = 60/436 (13%)

Query: 226  NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
              +Q         EE+    + ++  + ++     D SG        + I++++  +   
Sbjct: 982  PKKQTRLGLEAKKEENLAEWYSQVITKSEMIEY-YDVSGCYILRPWSYSIWESIKDFFDA 1040

Query: 286  KIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPG 343
            +IK    E    P  + Q   + +  H   +   +  V  +  T       A++P +   
Sbjct: 1041 EIKKLGVENCYFPIFVSQGALEKEKNHIADFAPEVAWVTRSGKTEL-AEPIAIRPTSETV 1099

Query: 344  HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFN 402
                +   ++S+R+LP+RL ++ +V R E        +R R F   + H  F T E+  +
Sbjct: 1100 MYPAYAKWVQSHRDLPIRLNQWCNVVRWEFK-HPQPFLRTREFLWQEGHSAFATFEEAAD 1158

Query: 403  ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
            E L+I  L   +Y++     ++    T  EK  G D                        
Sbjct: 1159 EVLQILELYARVYEELLAIPVVRGRKTEKEKFAGGD------------------------ 1194

Query: 463  INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
                        Y    E     A GR  Q  T        S+                 
Sbjct: 1195 ------------YTTTLE-AFISASGRAIQGATSHHLGQNFSKMCEIVFEDPKTPGEKQF 1241

Query: 523  IHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTT----------ITSSAVEYA 568
             ++  +G   R IG+MI     N+ L L P    +Q +V               + +   
Sbjct: 1242 AYQCSWGLTTRTIGVMIMVHGDNMGLVLPPRVASVQVVVIPCGITNTLSEEDREALMAKC 1301

Query: 569  QEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERS-IGIRRFGS 626
             E    L    +    D R+  +  +K     +K +P+ +  G ++      + +R   +
Sbjct: 1302 NEYRRRLLGADIRARVDLRDNYSPGWKFNHWELKGVPVRLEVGPRDMKSCQFVAVR-RDT 1360

Query: 627  TTTQKVSLLDAIPILT 642
                 ++  +A   L 
Sbjct: 1361 GEKLTIAEKEAESKLK 1376


>gi|320335305|ref|YP_004172016.1| Prolyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
 gi|319756594|gb|ADV68351.1| Prolyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
          Length = 488

 Score =  164 bits (416), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 68/426 (15%), Positives = 151/426 (35%), Gaps = 57/426 (13%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
            ++     +          + ++ R+ DL       +G +     G  I++ +  ++  +
Sbjct: 4   DKKAQQFGVTPQSVDFNEWYNEVVRKADLAD-HSPVAGAMVMKPYGSAIWERIQRWLDDE 62

Query: 287 IKDDYEE-INTPQVLDQHL-WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
            K    E +  P ++      +++ H + +   +F V     T      + ++P +    
Sbjct: 63  FKATGHESLVFPTLIPMSFITKEADHVEGFAPELFTV-NKIGTEVLAEPYVMRPTSETII 121

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN-E 403
             +++  L SYR+LP    ++GSV+R E        +R   F   + H     E     E
Sbjct: 122 GHMWSQWLNSYRDLPFLHYQWGSVFRAELR--TKPFLRTSEFYWHEGHTAHADEAEARAE 179

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            + + NL     +D     ++    +  E+  G+ A +                      
Sbjct: 180 VMAMLNLYHRFCRDVLALPVVRGEKSASERFAGAVATYS--------------------- 218

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
                           E +++D  G+  Q GT        SR  AF V   + +      
Sbjct: 219 ---------------IEGMMRD--GKALQSGTSHYLGQNFSR--AFDVKFQTREQREEYA 259

Query: 524 HRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTIT-----SSAVEYAQEIANL 574
           H   +    R IG +I     +    LP  ++P Q ++  +         +  A+ +A  
Sbjct: 260 HTTSWAISSRIIGALIMTHGDDKGLMLPPEIAPHQVVIIPVFRKDNVDQMIAEAEALAGE 319

Query: 575 LKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
           L++  + ++ D R+  T  +K  +  +K +P+ +  G ++     + ++       + + 
Sbjct: 320 LRAQGVRVKVDKRDGVTNGFKYNDWELKGVPVRMELGPRDLESGVVVVKNRTGDEKETLP 379

Query: 634 LLDAIP 639
             +AI 
Sbjct: 380 RHEAIS 385


>gi|110639601|ref|YP_679811.1| prolyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406]
 gi|122966540|sp|Q11Q45|SYP_CYTH3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|110282282|gb|ABG60468.1| prolyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406]
          Length = 491

 Score =  164 bits (416), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 70/439 (15%), Positives = 161/439 (36%), Gaps = 75/439 (17%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
              +     + +L +  DL   A     +I     G+ I++ + + + +  K+  +    
Sbjct: 7   KRSDDYSLWYNELVKRADLAENAPVRGCMII-KPYGYSIWEKMQAVLDKMFKETGHSNAY 65

Query: 296 TPQVLDQH-LWQQSGHWDSYRANMFAVKCA-------------DDTIKDLRTFALKPMNC 341
            P  + +  L +++ H D +      V                D   K      ++P + 
Sbjct: 66  FPLFIPKSYLSKEASHIDGFAKECAVVTHYRLKNDENGKGIIVDPEAKLDEELIVRPTSE 125

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQM 400
                 +   ++S+R+LP+ + ++ +V R E        +R   F   + H    TK++ 
Sbjct: 126 TVIWNTYKTWIQSHRDLPLLINQWANVVRWEMR--TRLFLRTTEFLWQEGHTAHATKQEA 183

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQ 460
             E  ++ N+  +  ++F    +   + +  E+  G++  +                   
Sbjct: 184 IVETEQMMNVYATFAQNFMALPVHRGIKSANERFAGAEETY------------------- 224

Query: 461 DRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCH 519
                              E +++D  G+  Q GT   +  N    F+  + +      +
Sbjct: 225 -----------------CIEALMQD--GKALQAGTSHFLGQNFAKAFDVKFASKEGSLEY 265

Query: 520 PVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVEY------AQ 569
              +    +G   R +G +I    ++    LP  L+PIQ ++  I  +A +        +
Sbjct: 266 ---VWGTSWGVSTRLMGALIMAHSDDEGLVLPPLLAPIQVVIVPIFKTAEQLDLIEATLK 322

Query: 570 EIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
            I   LK+  +S++ D  ++ +  +K  E+ +K +P+ +  G ++    ++ + R  +  
Sbjct: 323 PILAALKAKDISVKFDHSDKYSPGFKFAEYELKGVPLRVAIGARDIENGTVELARRDTKE 382

Query: 629 TQKVS---LLDAIPILTKE 644
              V    L D I  L +E
Sbjct: 383 KTTVPQEGLADTIEKLLQE 401


>gi|162316930|ref|YP_424303.2| prolyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum
           ATCC 27343]
 gi|114152214|sp|Q2SSG0|SYP_MYCCT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
          Length = 474

 Score =  164 bits (416), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 73/376 (19%), Positives = 142/376 (37%), Gaps = 54/376 (14%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAV 321
           G + +   G++I++ +  Y+  + K  + + +  P ++ + L+ ++  H D +   +  V
Sbjct: 36  GTMIFRPYGYRIWELIQKYLDEEFKKVNVDNVYFPLLIPESLFNKEKDHIDGFSPEIATV 95

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
                   +   F ++P +    +  F++ + SYR+LP+   ++ +V R E   +    +
Sbjct: 96  TRVGQKQLEENLF-IRPTSEVLMMDYFSNEINSYRDLPLIYNQWCNVMRWEK--TTRPFL 152

Query: 382 RVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           R   F   + H   +   +  N CLKI N+     K+     ++    T  EK  G    
Sbjct: 153 RTSEFLWQEGHTVHSSYNEAENFCLKILNIYEKFAKEILLLPVICGKKTEKEKFAG---- 208

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDF 500
                                           A      E ++ D  G+  QCGT     
Sbjct: 209 --------------------------------AKDTYTIESLMFD--GQALQCGTSHFFA 234

Query: 501 NLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL----SPIQAI 556
           +  ++   + +   +++      +   +G   R IG +I     +  L L    SPIQ  
Sbjct: 235 DNFTK--VYDIKFQNKENKLEHAYSTSWGVSTRLIGALIMTHSDDNGLVLPSKISPIQVQ 292

Query: 557 VTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
           +  I  T    +  + I + L      I+ D  +++  +KI E  IK IPI I  G ++ 
Sbjct: 293 IIQIKNTEQIDQVVEIIKDKLSD--YRIDVDNSDKSFGFKISEAEIKGIPIRIEIGPRDL 350

Query: 615 SERSIGIRRFGSTTTQ 630
               I I R      +
Sbjct: 351 ENNQITISRRDQQENK 366


>gi|311747849|ref|ZP_07721634.1| proline--tRNA ligase [Algoriphagus sp. PR1]
 gi|126575841|gb|EAZ80151.1| proline--tRNA ligase [Algoriphagus sp. PR1]
          Length = 493

 Score =  164 bits (416), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 74/441 (16%), Positives = 161/441 (36%), Gaps = 77/441 (17%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
              E     + +L +  DL   +     ++     G+ I++ + + + R  K+  +    
Sbjct: 7   KRSEDYSLWYNELVKRADLAENSAVRGCMVI-KPYGYSIWEKMQAELDRMFKETGHTNAY 65

Query: 296 TPQVLDQH-LWQQSGHWDSYRANMFAVKCA-------------DDTIKDLRTFALKPMNC 341
            P  + +  L +++ H + +      V                D   K      ++P + 
Sbjct: 66  FPLFIPKSYLSKEASHVEGFAKECAVVTHYRLKNGENGEGVIVDPDAKLEEELIVRPTSE 125

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQM 400
               + + + ++SYR+LP+ + ++ +V R E        +R   F   + H    T ++ 
Sbjct: 126 TVIWSTYKNWIQSYRDLPLLVNQWANVVRWEMR--TRLFLRTAEFLWQEGHTAHATAKEA 183

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQ 460
             E L++ N+  +  +DF    ++    +  E+  G+D                      
Sbjct: 184 EAETLQMMNVYATFAEDFMALPVVRGRKSANERFAGADD--------------------- 222

Query: 461 DRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCH 519
                              E +++D  G+  Q GT   +  N    F+  +     +  +
Sbjct: 223 ---------------TLCIEAMMQD--GKALQAGTSHFLGQNFAKAFDVKFAAKDGKLDY 265

Query: 520 PVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVEY------AQ 569
              +    +G   R +G +I    ++    LP  L+PIQ ++  I     E+      A 
Sbjct: 266 ---VWGTSWGVSTRLMGALIMAHSDDNGLVLPPKLAPIQVVIVPIYRKEEEFDAISEKAN 322

Query: 570 EIANLLKSHHLSIETDFRN-ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
           EI   L+   +S++ D R+     +K  E+ +K +P+ I  G ++    +I I R  + T
Sbjct: 323 EIMAELRKVGISVKYDNRDTHKPGWKFAEYELKGVPLRIAIGPRDLENGTIEIARRDNLT 382

Query: 629 TQKV-----SLLDAIPILTKE 644
             +       + + I  + +E
Sbjct: 383 KSQFELSSQPIAEKISGMLEE 403


>gi|313113439|ref|ZP_07799028.1| prolyl-tRNA synthetase [Faecalibacterium cf. prausnitzii KLE1255]
 gi|310624166|gb|EFQ07532.1| prolyl-tRNA synthetase [Faecalibacterium cf. prausnitzii KLE1255]
          Length = 479

 Score =  164 bits (416), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 77/426 (18%), Positives = 153/426 (35%), Gaps = 59/426 (13%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
            EE+  + +  +  + +L   +    G I     G  I++ +   M  + K   +E +  
Sbjct: 15  QEENFAQWYTDICVKAELVEYSSVK-GFIILRPYGQAIWELIQKDMDARFKATGHENVAM 73

Query: 297 PQVLDQHLWQQSGHWDS-YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P ++ + L Q+ G   + +   +  V        + R  A++P +       ++  L SY
Sbjct: 74  PVLIPESLLQKEGELVNGFAPEVAWVTMGGSDKLEER-LAVRPTSETMFCDHWSRVLHSY 132

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           RELP++  ++ SV R E   +    +R R F   + H             +      +  
Sbjct: 133 RELPMKYNQWCSVVRWEK--TTRPFLRSREFWWQEGHTIHETAAEAEAETQQQLNCYA-- 188

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                                     D  E  +   +   + + +++         GA  
Sbjct: 189 --------------------------DVCEQDLAIPVVKGRKTDKEKF-------AGAEA 215

Query: 476 GPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
               E ++KD  G+  Q GT           ++  +    ++  HP    +  +G   R 
Sbjct: 216 TYTIEAMMKD--GKALQSGTSHYFGDKFSKAYDVTFTGRDNQLHHPF---QTSWGVSTRL 270

Query: 535 IGIMIENFKGN----LPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFR 587
           +G +I     +    LP  ++PIQ +V  I        E A E+A  +  +   ++ D  
Sbjct: 271 VGAIIMTHGDDDGLILPPAVAPIQVVVVPIAAHKPGVSEKAAELAEKISKY-ARVKLDDS 329

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD---AIPILTKE 644
           +    +K  +  +K +P+ +  G K+  +    + R  +     VSL +   AIP    E
Sbjct: 330 DNAPGWKFSQWEMKGVPLRLEIGPKDLEKNQCVLVRRDTREKVFVSLDELETAIPA-QLE 388

Query: 645 SLPPDC 650
           +L  D 
Sbjct: 389 ALRKDL 394


>gi|284037200|ref|YP_003387130.1| prolyl-tRNA synthetase [Spirosoma linguale DSM 74]
 gi|283816493|gb|ADB38331.1| prolyl-tRNA synthetase [Spirosoma linguale DSM 74]
          Length = 490

 Score =  164 bits (416), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 62/434 (14%), Positives = 149/434 (34%), Gaps = 72/434 (16%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
             E+    + +L +  DL   +     ++     G+ I++ +   +    K+  ++    
Sbjct: 8   RSENYSEWYNELIKRADLAENSAVRGCMVI-KPYGFAIWEKMQRALDDMFKETGHQNAYF 66

Query: 297 PQVLDQHLW-QQSGHWDSYRANMFAVKCA-------------DDTIKDLRTFALKPMNCP 342
           P  + +    +++ H + +      V                D   K      ++P +  
Sbjct: 67  PLFIPKSFLSKEASHVEGFAKECAVVTHYRLKNAEDGSGVIVDPEAKLEEELIVRPTSET 126

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMF 401
              + + + ++SYR+LP+ + ++ +V R E        +R   F   + H    T E+  
Sbjct: 127 VIWSTYKNWIQSYRDLPLLINQWANVVRWEMR--TRIFLRTAEFLWQEGHTAHATAEEAK 184

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E  ++ ++                                          + +      
Sbjct: 185 FETRQMLDIYAQF------------------------------------AEEWMALPVVK 208

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHP 520
              T      GA      E +++D  G+  Q GT   +  N    F+  ++N  ++  + 
Sbjct: 209 GTKTANERFAGADDTLCIEAMMQD--GKALQAGTSHFLGQNFAKAFDVQFLNKQNQLDY- 265

Query: 521 VMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI--TSSAVEYA----QE 570
             +    +G   R +G +I    ++    LP  L+PIQ ++  I  +   +E      + 
Sbjct: 266 --VWGTSWGVSTRLMGALIMAHSDDDGLVLPPKLAPIQVVIVPIYRSEEQLELLSAKIKP 323

Query: 571 IANLLKSHHLSIETDFRN-ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           +   L+   +S++ D  +     +K  E+ ++ +P+ +  G ++    ++ I R    T 
Sbjct: 324 LVQELRKAGVSVKYDDSDANKPGWKFAEYELRGVPVRLAMGGRDLENGTVEIARRDLKTK 383

Query: 630 QKVSLLDAIPILTK 643
           + V        +  
Sbjct: 384 ETVPFEGLTEHIKN 397


>gi|146306290|ref|YP_001186755.1| prolyl-tRNA synthetase [Pseudomonas mendocina ymp]
 gi|166980142|sp|A4XRQ7|SYP_PSEMY RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|145574491|gb|ABP84023.1| prolyl-tRNA synthetase [Pseudomonas mendocina ymp]
          Length = 571

 Score =  164 bits (416), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 50/245 (20%), Positives = 96/245 (39%), Gaps = 11/245 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++    H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQFLLSTLKETPSDAVVISHQLMLRAGMIRKLA---SGLYTWLPMGLRVLRKVENVVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P +    LWQ+SG W  Y   +  VK      +  R F + P +    
Sbjct: 60  EMNAAGALEVLMPAIQPAELWQESGRWVQYGPELLRVKD-----RHEREFCVGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+ + +  + +R+E      GLMR R F   DA+ F   +    E 
Sbjct: 115 TDLARNELNSYKQLPINMYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSFHADQASLQET 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             ++H    +++   G     V+  T      GS      AE+    +  +  +     I
Sbjct: 174 YDRMHQAYCNVFSRLGLNFRPVQADTGSIGGTGSHEFHVLAESGEDDIAFSNVSDYAANI 233

Query: 464 NTGVL 468
                
Sbjct: 234 EKAEA 238



 Score = 82.1 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 34/177 (19%), Positives = 64/177 (36%), Gaps = 14/177 (7%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
           P  +      I R  + G I Q+        N   +  + +   PV +    +G  + R 
Sbjct: 393 PSPDGQGTLEIKRGIEVGHIFQLGTKYSEAMNCQVLGENGK---PVTLTMGCYGIGVSRV 449

Query: 535 IGIMIE-NFKGNLPLW---LSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFR 587
           +   IE N      LW   L+P    +  +   T    E   ++   L +    +  D R
Sbjct: 450 VAAAIEQNHDERGILWNDALAPFHIALVPLRYETEQVREATDKLYAELTAAGYEVLLDDR 509

Query: 588 NET--INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           ++      K  +  +  IP  ++  D+  +E ++  +    T  Q V L + +P L 
Sbjct: 510 DKKTSPGIKFADMELIGIPHRVVVSDRGLAEGNLEYKSRAETEAQAVPLAEILPFLQ 566


>gi|167752565|ref|ZP_02424692.1| hypothetical protein ALIPUT_00818 [Alistipes putredinis DSM 17216]
 gi|167659634|gb|EDS03764.1| hypothetical protein ALIPUT_00818 [Alistipes putredinis DSM 17216]
          Length = 494

 Score =  164 bits (416), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 74/406 (18%), Positives = 150/406 (36%), Gaps = 74/406 (18%)

Query: 270 RKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCA--- 324
             G+ I++ + + + +  KD  ++    P  + +  + +++ H + +      V      
Sbjct: 42  PYGYAIWEKMQAALDKMFKDTGHQNAYFPLFIPKSFFSKEADHVEGFAKECAVVTHYRLK 101

Query: 325 ----------DDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
                     D   K      ++P +       +   ++SYR+LP+   ++ +V R E  
Sbjct: 102 NDPEGKGVVVDPDAKLEEELIVRPTSETIIWNTYKGWIQSYRDLPILCNQWANVVRWEMR 161

Query: 375 GSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
                 +R   F   + H    TKE+   E  ++ ++     +++    ++V   +  E+
Sbjct: 162 --TRLFLRTAEFLWQEGHTAHATKEEAIEEATRMIHVYQKFVEEWMGVPVIVGHKSPNER 219

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
             G                                    A      E +++D  G+  Q 
Sbjct: 220 FAG------------------------------------AVDTLTIEALMQD--GKALQS 241

Query: 494 GTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPL 548
           GT   +  N    F+  Y+N   +  +   +    +G   R +G +I    +N    LP 
Sbjct: 242 GTSHFLGQNFAKAFDVQYINKEGKLEY---VWATSWGVSTRLMGALIMAHSDNNGLVLPP 298

Query: 549 WLSPIQAIVTTITSS------AVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIK 601
            L+PIQ ++  I          VE  + IA  LKS  LS++ D R+     +K  E+ +K
Sbjct: 299 KLAPIQVVLIPIYKGEEQMRQIVERLRTIAEELKSKGLSVKIDDRDNVRSGFKFAEYELK 358

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVS---LLDAIPILTKE 644
            +P+ +  G ++    +I + R  +   + V    L D +  L  E
Sbjct: 359 GVPVRLALGPRDLENGTIELVRRDTLEKETVPQEGLTDRVAALMDE 404


>gi|169335721|ref|ZP_02862914.1| hypothetical protein ANASTE_02141 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258459|gb|EDS72425.1| hypothetical protein ANASTE_02141 [Anaerofustis stercorihominis DSM
           17244]
          Length = 478

 Score =  164 bits (416), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 71/429 (16%), Positives = 165/429 (38%), Gaps = 61/429 (14%)

Query: 228 QQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI 287
           +++  Q +  + E   R +  +  + ++   A     ++     G+ +++ + +   ++ 
Sbjct: 3   KKKKVQAITPMGEDFARWYTDVITKTEMVDYAPVKGFMVI-RPYGYALWENIQAAFDKRF 61

Query: 288 KD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           K+  ++ +  P ++ +    ++  H + +   +  V    +     R   ++P +     
Sbjct: 62  KETGHQNMYFPLLIPESFLNKEKEHVEGFAPEVAWVTHGGENELAER-LCIRPTSETIIC 120

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNEC 404
           +++   LKSYR+LP    ++ +V R E   +    +R   F   + H    T E+   E 
Sbjct: 121 SMYAKWLKSYRQLPFLYNQWANVVRWEK--TTRPFLRTSEFLWQEGHTVHATFEEAQEET 178

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
           L++ ++   I +D+    ++V   +  EK  G+ A +                       
Sbjct: 179 LQMIDIYREICEDYLAMPVVVGQKSEKEKFAGAHATY----------------------- 215

Query: 465 TGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMI 523
                          E ++ D  G+  Q GT   +  +    F   ++N   ++ +    
Sbjct: 216 -------------TIEALMHD--GQALQSGTSHNLADHFAKAFGIKFLNKEEKEQYA--- 257

Query: 524 HRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIANLLK 576
           +   +G   R IG +I    +++    P  ++P Q ++  I       ++ A E+ N L 
Sbjct: 258 YSTSWGVSTRLIGGIIMVHGDDYGLVFPPKIAPTQVVIIPIAQHKEGVLDKANELKNKLS 317

Query: 577 SHHLSIETDFRNE--TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
              L +  D  NE  +  +K  +  +K +P+ I  G K+       I R  ++    VSL
Sbjct: 318 D--LRVLLDD-NEAYSPGWKFNQWEMKGVPVRIEIGPKDIENGQCVIARRDTSEKISVSL 374

Query: 635 LDAIPILTK 643
            +    + +
Sbjct: 375 DEVENKVKE 383


>gi|269966331|ref|ZP_06180418.1| Threonyl-tRNA synthetase [Vibrio alginolyticus 40B]
 gi|269829070|gb|EEZ83317.1| Threonyl-tRNA synthetase [Vibrio alginolyticus 40B]
          Length = 146

 Score =  164 bits (416), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 52/132 (39%), Positives = 85/132 (64%), Gaps = 5/132 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS + F    +  +VA+SI   LAK  +A  +NG   D  D +  + S+
Sbjct: 1   MP---IITLPDGSQRQFDNPVSTMEVAQSIGPGLAKATIAGRVNGNRVDACDLIEEDASL 57

Query: 60  EIITPEDP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           EIIT +D    L ++RHSCAH++  A++ ++P+ ++AIGP I++GFYYD D ++  + ++
Sbjct: 58  EIITVKDEVDGLEIVRHSCAHLLGHALKQLYPQAKMAIGPTIDNGFYYDIDLDESLTQED 117

Query: 119 LAQIEKKMQEII 130
           L +IEK+M+E+ 
Sbjct: 118 LEKIEKRMKELA 129


>gi|134045917|ref|YP_001097403.1| prolyl-tRNA synthetase [Methanococcus maripaludis C5]
 gi|172044143|sp|A4FYA4|SYP_METM5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|132663542|gb|ABO35188.1| prolyl-tRNA synthetase [Methanococcus maripaludis C5]
          Length = 460

 Score =  164 bits (415), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 76/427 (17%), Positives = 160/427 (37%), Gaps = 63/427 (14%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
                 +  +  +  ++ +     G   +   G+KI +     +R+ + + +++E   P 
Sbjct: 1   MEFSEWYSDILEKAGIYDLRYPIKGCGVYLPYGFKIRRYSFEILRKLLDETNHDETLFPM 60

Query: 299 VLDQHLWQQSG-HWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           ++ ++L  + G H   +   +F V     T  +++  AL+P +      +    +K + +
Sbjct: 61  LIPENLLAKEGEHIKGFEDEVFWVTHGGKTPLEVK-LALRPTSETTMYYMMKQWIKVHTD 119

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRG-FTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           LP++L +  + +R E       L+R+R   +  +AH   T      +C       +++Y 
Sbjct: 120 LPMKLYQVVNTFRYETK-HTRPLIRLREIMSFKEAH---TAHATKEDCDAQITEALNLYG 175

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           +F  E  +  + ++  +       WD                             GA Y 
Sbjct: 176 EFFDEICVPYIISKRPE-------WDKF--------------------------PGADYT 202

Query: 477 PKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
             F+ I  D  G+  Q GT+  +  N    F   +     EK     +++  +G  +R I
Sbjct: 203 MAFDTIYPD--GKTMQIGTVHNLGQNFAKTFELEFETPDGEKD---FVYQTCYGISDRAI 257

Query: 536 GIMIENFKGNLPLWL----SPIQAIVTTI-----TSSAVEYAQEIANLLKSHHLSIETDF 586
             +I        L +    +PIQ ++  +         ++  +E+ N LKS    +  D 
Sbjct: 258 ASLISVHGDEKGLVIPVDVAPIQIVLIPLLFKGKEEIVMDKIKELNNTLKSE-FRVHLDD 316

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS---LLDAIPILT- 642
           R+     K  +  IK +P+ I  G ++       I R  +     V    +L+ +  +  
Sbjct: 317 RDIRPGRKYNDWEIKGVPLRIELGPRDIENGQALIVRRDTGEKITVEYSNILEEVEKIVS 376

Query: 643 --KESLP 647
             KE+L 
Sbjct: 377 MYKENLK 383


>gi|88802133|ref|ZP_01117661.1| prolyl-tRNA synthetase [Polaribacter irgensii 23-P]
 gi|88782791|gb|EAR13968.1| prolyl-tRNA synthetase [Polaribacter irgensii 23-P]
          Length = 492

 Score =  164 bits (415), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 67/440 (15%), Positives = 162/440 (36%), Gaps = 73/440 (16%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
           ++++L    +   + + +L  + DL   +     ++     G+ I++ + + + R  K+ 
Sbjct: 1   MSKHLTKRADDYSKWYNELVVKADLAENSAVRGCMVI-KPYGFAIWEKMQAELDRMFKET 59

Query: 290 DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCA--------------DDTIKDLRTF 334
            ++    P  + + L++ +  + + +      V                 D   K     
Sbjct: 60  GHQNAYFPLFVPKSLFEAEEKNAEGFAKECAVVTHYRLQNDPDNPGKLRVDPDAKLEEEL 119

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
            ++P +     + +   ++SYR+LP+ + ++ +V R E        +R   F   + H  
Sbjct: 120 VVRPTSEAIIWSTYKGWIQSYRDLPLLINQWANVVRWEMR--TRLFLRTAEFLWQEGHTA 177

Query: 395 CTKE-QMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
            T   +   E  ++ ++  +  +DF    ++    +  E+  G       AE+ +     
Sbjct: 178 HTTRAEAITEAQQMQDIYATFAEDFMAMPVVKGAKSDSERFAG-------AEDTL----- 225

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVN 512
                                     E +++D  G+  Q GT   +  N    F+  + +
Sbjct: 226 ------------------------TIEALMQD--GKALQAGTSHFLGQNFAKAFDVKFTS 259

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSS----- 563
              +K +   +    +G   R IG +I    ++    LP  L+PIQ ++  I        
Sbjct: 260 KEGKKEY---VWATSWGVSTRLIGGLIMTHSDDSGLVLPPKLAPIQVVIVPIYKDETQLQ 316

Query: 564 -AVEYAQEIANLLKSHHLSIETDFRN-ETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
              +        L++   S++ D R+      K  E+ +K +P+ I  G ++    ++ +
Sbjct: 317 AISDKVAMFVKELRAKGASVKFDDRDTYRPGAKFAEYELKGVPVRIAIGSRDLENGTVEV 376

Query: 622 RRFGSTTTQKVSLLDAIPIL 641
            R  +   Q V+  + +  +
Sbjct: 377 ARRDTFEKQTVAQDEVVSFV 396


>gi|317131365|ref|YP_004090679.1| prolyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
 gi|315469344|gb|ADU25948.1| prolyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
          Length = 480

 Score =  164 bits (415), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 71/414 (17%), Positives = 156/414 (37%), Gaps = 55/414 (13%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
           +EE   + +  + ++ +L   +    G +F     + I++ +   +  K K+  +E +  
Sbjct: 16  MEEDFAKWYTDIVKKAELVDYS-SMRGCLFIRPYAYAIWENIQKVLDAKFKETGHENVYM 74

Query: 297 PQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P  + + L  ++  H + +   +  V        + R   ++P +       ++H + SY
Sbjct: 75  PLFIPESLLQKEKDHIEGFAPEVAWVTHGGGEKLEER-LCVRPTSETLFCEHYSHIVHSY 133

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           R+LP    ++ SV R E   +    +R   F   + H   T  +   E  +    +++IY
Sbjct: 134 RDLPKLYNQWCSVVRWEK--TTRPFLRSLEFLWQEGH---TLHETEAEAREETTRMLNIY 188

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
            DF                          E ++   +   + + +++         GA  
Sbjct: 189 ADF-------------------------CEQVLAMPVVKGRKTEKEKF-------AGAVD 216

Query: 476 GPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
               E ++ D  G+  Q GT           F+  Y    +   +P    +  +G   R 
Sbjct: 217 TCSIEAMMHD--GKALQSGTSHYLGDGFTHAFDIQYTGRDNTLKYPF---QTSWGVTTRL 271

Query: 535 IGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFR 587
           IG +I    ++    LP  ++P Q ++  +       +E A E+   L+   L ++ D  
Sbjct: 272 IGAIIMVHGDDSGLVLPPRIAPTQLVIVPVAMHKPGVLEKANELLVRLQKT-LRVKLDAS 330

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           + +  +K  E+ +K +P+ +  G ++  +    + R       +VSL +    L
Sbjct: 331 DNSPGWKFAEYEMKGVPLRLEIGPRDIEQNRCVVVRRDDRQKIEVSLDELETRL 384


>gi|291402378|ref|XP_002717441.1| PREDICTED: glutamyl-prolyl tRNA synthetase [Oryctolagus cuniculus]
          Length = 1460

 Score =  164 bits (415), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 76/436 (17%), Positives = 146/436 (33%), Gaps = 60/436 (13%)

Query: 226  NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
              +Q         EE+    + ++  + ++     D SG        + I++++  +   
Sbjct: 956  PKKQTRLGLEAKKEENLADWYSQVITKSEMIEY-YDVSGCYILRPWAYSIWESIKDFFDA 1014

Query: 286  KIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPG 343
            +IK    E    P  + Q   + +  H   +   +  V  +  T       A++P +   
Sbjct: 1015 EIKKLGVENCYFPIFVSQSALEKEKTHVADFAPEVAWVTRSGKTEL-AEPIAIRPTSETV 1073

Query: 344  HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFN 402
                +   ++S+R+LP+RL ++ +V R E        +R R F   + H  F T E+   
Sbjct: 1074 MYPAYAKWVQSHRDLPIRLNQWCNVVRWEFK-HPQPFLRTREFLWQEGHSAFATFEEAAE 1132

Query: 403  ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
            E L+I +L   +Y++     ++    T  EK  G D                        
Sbjct: 1133 EVLQILDLYARVYEELLAIPVVKGRKTEKEKFAGGD------------------------ 1168

Query: 463  INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
                        Y    E     A GR  Q GT        S+                 
Sbjct: 1169 ------------YTTTIE-AFISASGRAIQGGTSHHLGQNFSKMCEIVFEDPKTPGEKQF 1215

Query: 523  IHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTT----------ITSSAVEYA 568
             ++  +G   R IG+MI     N+ L L P    +Q +V               + +   
Sbjct: 1216 AYQCSWGLTTRTIGVMIMVHGDNMGLVLPPRVASVQVVVIPCGITNALSEEDKEALIAKC 1275

Query: 569  QEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERS-IGIRRFGS 626
             +    L S  + +  D R+  +  +K     +K +PI +  G ++      + +R   +
Sbjct: 1276 NDYCRRLLSVSIRVRADLRDNYSPGWKFNHWELKGVPIRLEVGPRDMKNCQFVAVR-RDT 1334

Query: 627  TTTQKVSLLDAIPILT 642
                 ++  +A   L 
Sbjct: 1335 GEKLTIAENEAETKLQ 1350


>gi|257389171|ref|YP_003178944.1| prolyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286]
 gi|257171478|gb|ACV49237.1| prolyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286]
          Length = 484

 Score =  164 bits (415), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 65/411 (15%), Positives = 137/411 (33%), Gaps = 71/411 (17%)

Query: 270 RKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDT 327
            +G+ I++ + +++    KD   +    P  + +   + +    + +   +  V    + 
Sbjct: 44  PRGYAIWEQIQTHLDGWFKDTGVQNAYFPMFIPESYLEREKDIVEGFDPEVAWVTHGGNE 103

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
             + R  A++P +            +S+R+LP+R+ ++ SV R E +       R + F 
Sbjct: 104 ELEER-LAVRPTSESIIAPFLAQWTRSHRDLPLRINQWCSVVRWEAT-ETKPFFRTKEFL 161

Query: 388 QDDAHVFCTKEQMFNE-CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
             + H     E    E  +   +    +Y+D      +       +K             
Sbjct: 162 WQEGHTAHRDEDDAWEETMTRLDQYEKLYEDVLAMPPLKGRKPEHDKF------------ 209

Query: 447 IMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV-DFNLPSR 505
                                    GA      E ++ D  G+  Q  T      +    
Sbjct: 210 ------------------------PGAHTTTTVETLMPD--GKSVQAATSHYLGTSFAEA 243

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNL----PLWLSPIQAIVTTI- 560
           F+  YV+   E+      H   +G   R +G +I     +     P  L+P Q +V  I 
Sbjct: 244 FDITYVDEDEEEETA---HTTSWGLSWRAMGALIMTHSDDQGLVLPPTLAPKQVVVVPIW 300

Query: 561 ----TSSAVEYAQEIANLLKSHHLSIETDFRNET-INYKIREHSIKKIPIIIICGDKEAS 615
                   +EYA ++A  L    + +  D R+     +K  +  +K +P+ +  G  E  
Sbjct: 301 QEDTKDEVLEYAADVAAELDEAGVRVHFDDRDHRNPGFKYNDWELKGVPLRVEIGPNEVE 360

Query: 616 ERSIGIRRFGSTTTQKVS-----------LLDAIPIL---TKESLPPDCQK 652
           +  + +       +   S           L +    L    +E+L  + ++
Sbjct: 361 DEELTLSHRPDGESITESRDGLETTVRDHLDEVFAKLYASAEETLEGEIRE 411


>gi|299472673|emb|CBN78325.1| Proline--tRNA ligase [Ectocarpus siliculosus]
          Length = 906

 Score =  164 bits (415), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 72/408 (17%), Positives = 149/408 (36%), Gaps = 59/408 (14%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ-VLDQHLWQQSGHWDSYRAN 317
            D SG        +++++ +  +M ++IK+ D +    P  V  + L  +  H + + A 
Sbjct: 436 YDISGCYILRPWAYQMWEAIQQWMDKEIKELDVQNSYFPLFVSKKALEAEKAHVEGFAAE 495

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           +  V  + +   +    A++P +       F+  ++S+R+LP++L ++ +V R E     
Sbjct: 496 VAWVTKSGEDDLE-EPIAVRPTSETIMYPAFSRWIRSHRDLPLKLNQWSNVVRWEFKNPT 554

Query: 378 HGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
              +R R F   + H      E      ++   L   +Y++     +++   T  EK  G
Sbjct: 555 -PFLRTREFLWQEGHTAHASFEDADKMVIQALELYRRVYEELLAVPVIMGTKTEAEKFAG 613

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
                                                      E  +    GR  Q  T 
Sbjct: 614 GHK------------------------------------TTTVEAYI-SGTGRAIQGATS 636

Query: 497 -QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL----S 551
             +  N    F   Y + + E+  P    +  +G   R +G+ +     +  L L    +
Sbjct: 637 HHLGQNFGKMFKIQYEDENGEQAIP---WQTSWGLTTRTLGVCVMCHGDDQGLVLPPRVA 693

Query: 552 PIQAIVTTIT------SSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIREHSIKKIP 604
           P+QA++  I        + VE+A  I   LK+  + ++ D R N T  +K      K +P
Sbjct: 694 PLQAVIIPIVTKKVKLETIVEFADPIVKSLKAAGVRVKFDDRINYTAGWKYNHWEQKGVP 753

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK--ESLPPDC 650
           I +  G ++   +   + R  +     V   +    + +  E++  + 
Sbjct: 754 IRLEVGPRDIESKQTVMARRDTGEKITVPEDEITSKVVELLETIQANL 801


>gi|57530349|ref|NP_001006398.1| bifunctional aminoacyl-tRNA synthetase [Gallus gallus]
 gi|53133756|emb|CAG32207.1| hypothetical protein RCJMB04_20b9 [Gallus gallus]
          Length = 1601

 Score =  164 bits (415), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 74/437 (16%), Positives = 147/437 (33%), Gaps = 60/437 (13%)

Query: 226  NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
              +Q         EE+      ++  + ++     D SG        + I++ + ++   
Sbjct: 1097 PKKQTRLGLEAKKEENLADWFSQVITKAEMIEY-YDVSGCYVLRPWAYAIWEAIKNFFDA 1155

Query: 286  KIKD-DYEEINTPQVLD-QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPG 343
            +IK    E    P  +    L ++  H   +   +  V  +  T       A++P +   
Sbjct: 1156 EIKKLGVENCYFPMFVSQAALEKEKSHIADFAPEVAWVTRSGKTEL-AEPIAIRPTSETV 1214

Query: 344  HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFN 402
                +   ++S+R+LP++L ++ +V R E        +R R F   + H  F T E+   
Sbjct: 1215 MYPAYAKWVQSHRDLPIKLNQWCNVVRWEFK-HPQPFLRTREFLWQEGHSAFATYEEAAE 1273

Query: 403  ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
            E ++I +L   +Y+D     ++    T  EK  G D                        
Sbjct: 1274 EVMQILDLYAQVYEDLLAIPVVKGRKTEKEKFAGGD------------------------ 1309

Query: 463  INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
                        Y    E     A GR  Q  T        S+          +      
Sbjct: 1310 ------------YTTTVE-AFISASGRAIQGATSHHLGQNFSKMFEVMFEDPKKPGEKQY 1356

Query: 523  IHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTT----------ITSSAVEYA 568
             ++  +G   R IG+M      N+ L L P    +Q ++               + ++  
Sbjct: 1357 AYQNSWGITTRTIGVMTMIHGDNVGLVLPPRVACVQVVIIPCGITNTLSEEDKEALLKKC 1416

Query: 569  QEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERS-IGIRRFGS 626
             E    L S ++ +  D R+  +  +K     +K +PI +  G ++   +  + +R   +
Sbjct: 1417 NEYRKRLLSANVRVRADLRDNYSPGWKFNHWELKGVPIRLEVGPRDMKSQQFVAVR-RDT 1475

Query: 627  TTTQKVSLLDAIPILTK 643
                  S  +A   L +
Sbjct: 1476 GQKLTFSEHEAEDKLKQ 1492


>gi|296230065|ref|XP_002760549.1| PREDICTED: bifunctional aminoacyl-tRNA synthetase [Callithrix
            jacchus]
          Length = 1540

 Score =  164 bits (415), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 78/436 (17%), Positives = 145/436 (33%), Gaps = 60/436 (13%)

Query: 226  NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
              +Q         EE+    + ++  + ++     D SG        + I++ +  +   
Sbjct: 1036 PKKQTRLGLEAKKEENLADWYSQVITKAEMIEYH-DVSGCYILRPWAYAIWEAIKDFFDA 1094

Query: 286  KIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPG 343
            +IK    E    P  + Q   + +  H   +   +  V  +  T       A++P +   
Sbjct: 1095 EIKKLGVENCYFPMFVSQGALEKEKTHVADFAPEVAWVTRSGKTEL-AEPIAIRPTSETV 1153

Query: 344  HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFN 402
                +   ++S+R+LP+RL ++ +V R E        +R R F   + H  F T E+   
Sbjct: 1154 MYPAYAKWVQSHRDLPIRLNQWCNVVRWEFK-HPQPFLRTREFLWQEGHSAFATIEEAAE 1212

Query: 403  ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
            E L+I +L   IY++     ++    T  EK  G D                        
Sbjct: 1213 EVLQILDLYAQIYEELLAIPVVKGRKTEKEKFAGGD------------------------ 1248

Query: 463  INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
                        Y    E     A GR  Q GT        S+                 
Sbjct: 1249 ------------YTTTVE-AFISASGRAIQGGTSHHLGQNFSKMFEIMFEDPKTPGEKQF 1295

Query: 523  IHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTT----------ITSSAVEYA 568
             ++  +G   R IG+M      N+ L L P    +Q +V               + +   
Sbjct: 1296 AYQNSWGLTTRTIGVMTMIHGDNMGLVLPPRVACVQVVVIPCGITNALSEEDKEALMAKC 1355

Query: 569  QEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERS-IGIRRFGS 626
             +    L S ++ +  D R+  +  +K     +K +PI +  G ++      + +R   +
Sbjct: 1356 NDYRRRLLSVNIRVRADLRDNYSPGWKFNHWELKGVPIRLEVGPRDMKNCQFVAVR-RDT 1414

Query: 627  TTTQKVSLLDAIPILT 642
                 VS  +A   L 
Sbjct: 1415 GEKLTVSENEAETKLQ 1430


>gi|25012603|gb|AAN71400.1| RE41560p [Drosophila melanogaster]
          Length = 998

 Score =  164 bits (415), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 78/394 (19%), Positives = 141/394 (35%), Gaps = 65/394 (16%)

Query: 273 WKIFQTLISYMRRKIKD-DYEEINTPQ-VLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           + I++ + ++   +I     +E   P  V    L ++  H   +   +  V  + D+   
Sbjct: 539 FAIWKAIKTWFDAEITRMGVKECYFPIFVSKAVLEKEKTHIADFAPEVAWVTKSGDSDL- 597

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
               A++P +       +   ++SYR+LP+RL ++ +V R E        +R R F   +
Sbjct: 598 AEPIAVRPTSETVMYPAYAKWVQSYRDLPIRLNQWNNVVRWEFKQPT-PFLRTREFLWQE 656

Query: 391 AHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMK 449
            H  F  KE+   E L I +L   +Y       ++    T  EK  G D           
Sbjct: 657 GHTAFADKEEAAKEVLDILDLYALVYTHLLAIPVVKGRKTEKEKFAGGD----------- 705

Query: 450 GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNA 508
                                    Y    E     A GR  Q  T   +  N    F  
Sbjct: 706 -------------------------YTTTVE-AFISASGRAIQGATSHHLGQNFSKMFEI 739

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTTITSSA 564
            Y +  +++     +++  +G   R IG+MI     N  L L P    IQAIV     + 
Sbjct: 740 VYEDPETQQKK--YVYQNSWGITTRTIGVMIMVHADNQGLVLPPHVACIQAIVVPCGITV 797

Query: 565 ----------VEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKE 613
                     ++  + +   L    +  E D+R+  +  +K     +K +P+ +  G K+
Sbjct: 798 NTKDDERAQLLDACKALEKRLVGGGVRCEGDYRDNYSPGWKFNHWELKGVPLRLEVGPKD 857

Query: 614 ASERS-IGIRRFGSTTTQKVSLLDA---IPILTK 643
              +  + +R   +     + L D    IP L +
Sbjct: 858 LKAQQLVAVR-RDTVEKITIPLADVEKKIPALLE 890


>gi|24649468|ref|NP_732925.1| Glutamyl-prolyl-tRNA synthetase, isoform B [Drosophila
           melanogaster]
 gi|23172101|gb|AAN13964.1| Glutamyl-prolyl-tRNA synthetase, isoform B [Drosophila
           melanogaster]
          Length = 996

 Score =  164 bits (415), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 78/394 (19%), Positives = 141/394 (35%), Gaps = 65/394 (16%)

Query: 273 WKIFQTLISYMRRKIKD-DYEEINTPQ-VLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           + I++ + ++   +I     +E   P  V    L ++  H   +   +  V  + D+   
Sbjct: 537 FAIWKAIKTWFDAEITRMGVKECYFPIFVSKAVLEKEKTHIADFAPEVAWVTKSGDSDL- 595

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
               A++P +       +   ++SYR+LP+RL ++ +V R E        +R R F   +
Sbjct: 596 AEPIAVRPTSETVMYPAYAKWVQSYRDLPIRLNQWNNVVRWEFKQPT-PFLRTREFLWQE 654

Query: 391 AHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMK 449
            H  F  KE+   E L I +L   +Y       ++    T  EK  G D           
Sbjct: 655 GHTAFADKEEAAKEVLDILDLYALVYTHLLAIPVVKGRKTEKEKFAGGD----------- 703

Query: 450 GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNA 508
                                    Y    E     A GR  Q  T   +  N    F  
Sbjct: 704 -------------------------YTTTVE-AFISASGRAIQGATSHHLGQNFSKMFEI 737

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTTITSSA 564
            Y +  +++     +++  +G   R IG+MI     N  L L P    IQAIV     + 
Sbjct: 738 VYEDPETQQKK--YVYQNSWGITTRTIGVMIMVHADNQGLVLPPHVACIQAIVVPCGITV 795

Query: 565 ----------VEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKE 613
                     ++  + +   L    +  E D+R+  +  +K     +K +P+ +  G K+
Sbjct: 796 NTKDDERAQLLDACKALEKRLVGGGVRCEGDYRDNYSPGWKFNHWELKGVPLRLEVGPKD 855

Query: 614 ASERS-IGIRRFGSTTTQKVSLLDA---IPILTK 643
              +  + +R   +     + L D    IP L +
Sbjct: 856 LKAQQLVAVR-RDTVEKITIPLADVEKKIPALLE 888


>gi|24649466|ref|NP_524471.2| Glutamyl-prolyl-tRNA synthetase, isoform A [Drosophila melanogaster]
 gi|44888996|sp|P28668|SYEP_DROME RecName: Full=Bifunctional aminoacyl-tRNA synthetase; Includes:
            RecName: Full=Glutamyl-tRNA synthetase; AltName:
            Full=Glutamate--tRNA ligase; Short=GluRS; Includes:
            RecName: Full=Prolyl-tRNA synthetase; AltName:
            Full=Proline--tRNA ligase; Short=ProRS
 gi|7301076|gb|AAF56211.1| Glutamyl-prolyl-tRNA synthetase, isoform A [Drosophila melanogaster]
 gi|16198227|gb|AAL13932.1| LD42739p [Drosophila melanogaster]
          Length = 1714

 Score =  164 bits (415), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 78/394 (19%), Positives = 141/394 (35%), Gaps = 65/394 (16%)

Query: 273  WKIFQTLISYMRRKIKD-DYEEINTPQ-VLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            + I++ + ++   +I     +E   P  V    L ++  H   +   +  V  + D+   
Sbjct: 1255 FAIWKAIKTWFDAEITRMGVKECYFPIFVSKAVLEKEKTHIADFAPEVAWVTKSGDSDL- 1313

Query: 331  LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
                A++P +       +   ++SYR+LP+RL ++ +V R E        +R R F   +
Sbjct: 1314 AEPIAVRPTSETVMYPAYAKWVQSYRDLPIRLNQWNNVVRWEFKQPT-PFLRTREFLWQE 1372

Query: 391  AHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMK 449
             H  F  KE+   E L I +L   +Y       ++    T  EK  G D           
Sbjct: 1373 GHTAFADKEEAAKEVLDILDLYALVYTHLLAIPVVKGRKTEKEKFAGGD----------- 1421

Query: 450  GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNA 508
                                     Y    E     A GR  Q  T   +  N    F  
Sbjct: 1422 -------------------------YTTTVE-AFISASGRAIQGATSHHLGQNFSKMFEI 1455

Query: 509  FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTTITSSA 564
             Y +  +++     +++  +G   R IG+MI     N  L L P    IQAIV     + 
Sbjct: 1456 VYEDPETQQKK--YVYQNSWGITTRTIGVMIMVHADNQGLVLPPHVACIQAIVVPCGITV 1513

Query: 565  ----------VEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKE 613
                      ++  + +   L    +  E D+R+  +  +K     +K +P+ +  G K+
Sbjct: 1514 NTKDDERAQLLDACKALEKRLVGGGVRCEGDYRDNYSPGWKFNHWELKGVPLRLEVGPKD 1573

Query: 614  ASERS-IGIRRFGSTTTQKVSLLDA---IPILTK 643
               +  + +R   +     + L D    IP L +
Sbjct: 1574 LKAQQLVAVR-RDTVEKITIPLADVEKKIPALLE 1606


>gi|301769275|ref|XP_002920053.1| PREDICTED: bifunctional aminoacyl-tRNA synthetase-like [Ailuropoda
            melanoleuca]
          Length = 1509

 Score =  164 bits (415), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 76/435 (17%), Positives = 146/435 (33%), Gaps = 60/435 (13%)

Query: 226  NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
              +Q         EE+    + ++  + +L     D SG        + I++++  +   
Sbjct: 1005 PKKQTRLGLEAKKEENLADWYSQVITKSELIEY-YDVSGCYILRPWAYSIWESIKDFFDA 1063

Query: 286  KIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPG 343
            +IK    E    P  + Q   + +  H   +   +  V  +  T       A++P +   
Sbjct: 1064 EIKKLGVENCYFPMFVSQGALEKEKTHIADFAPEVAWVTRSGKTEL-AEPIAVRPTSETV 1122

Query: 344  HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFN 402
                +   ++S+R+LP+RL ++ +V R E        +R R F   + H  F T E+   
Sbjct: 1123 MYPAYAKWVQSHRDLPIRLNQWCNVVRWEFK-HPQPFLRTREFLWQEGHSAFATFEEAAE 1181

Query: 403  ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
            E L+I +L   +Y++     ++    T  EK  G D                        
Sbjct: 1182 EVLQILDLYAQVYEELLAIPVVKGRKTEKEKFAGGD------------------------ 1217

Query: 463  INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
                        Y    E  +  A GR  Q  T        S+                 
Sbjct: 1218 ------------YTTTLEVFI-SASGRAIQGATSHHLGQNFSKMFEIIFEDPKTPGEKQF 1264

Query: 523  IHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTT----------ITSSAVEYA 568
             ++  +G   R IG+M      N+ L L P    +Q +V               + +   
Sbjct: 1265 AYQNSWGLTTRTIGVMTMVHGDNMGLVLPPRVASVQVVVIPCGITNALSEEDREALIAKC 1324

Query: 569  QEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERS-IGIRRFGS 626
             +    L S ++ +  D R+  +  +K     +K +PI +  G ++      + +R   +
Sbjct: 1325 NDYRKRLLSVNIRVRVDLRDNYSPGWKFNHWELKGVPIRLEVGPRDMKSCQFVAVR-RDT 1383

Query: 627  TTTQKVSLLDAIPIL 641
                 V+  +A   L
Sbjct: 1384 GEKLTVADNEAETKL 1398


>gi|119357673|ref|YP_912317.1| prolyl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266]
 gi|152016595|sp|A1BHL6|SYP_CHLPD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|119355022|gb|ABL65893.1| prolyl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266]
          Length = 481

 Score =  164 bits (415), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 64/422 (15%), Positives = 153/422 (36%), Gaps = 58/422 (13%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
                 + +  L R   L   ++    ++     G+ I++ + + + R  K+  +     
Sbjct: 8   RSADYSQWYIDLVRSAKLADYSDVRGCMVI-RPNGYAIWEKMQTALDRMFKETGHVNAYF 66

Query: 297 PQVLDQHL-WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P  + +    +++ H + +      V          + + ++P +     + +   ++SY
Sbjct: 67  PLFIPESFIAKEAEHIEGFAPECAVVTHGGGEELAEKLY-VRPTSETIIWSSYKKWIQSY 125

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISI 414
           R+LP+ + ++ +V R E        +R   F   + H    T E+   E +++ N+  + 
Sbjct: 126 RDLPILINQWANVVRWEMR--TRLFLRTTEFLWQEGHTAHATPEESQEEVVRMINVYKTF 183

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            +++    +++   T  EK  G+   W                                 
Sbjct: 184 AENYMALPVIIGKKTDSEKFAGAVDTW--------------------------------- 210

Query: 475 YGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
                E +++D+  +  Q GT   +  N    F+  +     +  +   +    +G   R
Sbjct: 211 ---CIEAMMQDS--KALQAGTSHNLGQNFAKAFDCQFQTRDGKLDY---VWATSWGVSTR 262

Query: 534 FIGIMIENFKGNLPLWLSP----IQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETD 585
            IG +I     +  L L P     Q ++  I     ++  E A  I+  L ++ +    D
Sbjct: 263 LIGALIMAHSDDRGLVLPPKLATRQVVIIPILKGDKAAVCEKAHAISRTLSANGIPAFVD 322

Query: 586 FRN-ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
                +  +K  E+ ++ IP+ I  G ++    +  + R  +    +++L D + +   E
Sbjct: 323 DSEQNSPGWKFAEYELQGIPLRIELGPRDIQNGTCIVARRDTLEKTELALDDTLSVSISE 382

Query: 645 SL 646
            L
Sbjct: 383 IL 384


>gi|313885480|ref|ZP_07819230.1| proline--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
 gi|312619210|gb|EFR30649.1| proline--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
          Length = 479

 Score =  164 bits (415), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 64/419 (15%), Positives = 154/419 (36%), Gaps = 56/419 (13%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEE-INT 296
            +E   + + +  ++ DL   +    G + +   G+++++ + +   ++ K++       
Sbjct: 4   RQEDFSKWYLQTIQQADLMDYSPVR-GCMIFKPNGYELWEHIQANFDKRFKEEGVRNAYF 62

Query: 297 PQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P ++ +  + ++  H + +   +  V  A     + R  AL+P +       ++  + SY
Sbjct: 63  PMLIPESFFTKEKDHIEGFAPELPWVTEAAGEKLEER-LALRPTSETMIGHAYSKWINSY 121

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISI 414
           R+LP+ L ++ +V+R E        +R   F   + H    T E+  +  +++  +   +
Sbjct: 122 RDLPLMLNQWANVFRWEKR--TLPFLRTSEFLWQEGHTAHATGEEALDRTMRMLQVYKEV 179

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            +D     +     T  E+  G               ++T    +  +    V  G   +
Sbjct: 180 IEDVLAVPVFEGEKTPSERFAG--------------AMNTFSVEAMMQDGKAVQAGTSHY 225

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
            G KF                          F+  Y+NS++E  H        +G   R 
Sbjct: 226 LGTKF-----------------------AEAFDIKYLNSNNEHVHAF---TTSWGVSTRL 259

Query: 535 IGIMI----ENFKGNLPLWLSPIQAIVTTI-----TSSAVEYAQEIANLLKSHHLSIETD 585
           IG +I    ++    LP  ++P Q +   +       + +E   E    L++  +    D
Sbjct: 260 IGSLIMVHSDDQGLVLPPKIAPQQVVFIPVGPWQKNPAIMEQINEWNQALQAKGVRTIID 319

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
             +    +K  E  ++  P+ I  G ++   +   ++    +  + V+    +  +  E
Sbjct: 320 DSDNRPGFKFNEWELRGAPLRIEVGPRDLENKQAILKARDLSEKETVAADQVVDRVLAE 378


>gi|257438845|ref|ZP_05614600.1| proline--tRNA ligase [Faecalibacterium prausnitzii A2-165]
 gi|257198660|gb|EEU96944.1| proline--tRNA ligase [Faecalibacterium prausnitzii A2-165]
          Length = 479

 Score =  164 bits (415), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 79/437 (18%), Positives = 158/437 (36%), Gaps = 59/437 (13%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
             ++L Q +   EE+  + +  +  + +L   +    G I     G  I++ +   M  +
Sbjct: 4   DNKKLVQAITSQEENFAQWYTDICVKAELVEYSSVK-GFIILRPYGQAIWELIQKDMDAR 62

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDS-YRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
            K   +E +  P ++ + L Q+ G   + +   +  V        + R  A++P +    
Sbjct: 63  FKATGHENVAMPVLIPESLLQKEGELVNGFAPEVAWVTMGGSDKLEER-LAVRPTSETMF 121

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
              ++  L SYRELP++  ++ SV R E   +    +R R F   + H            
Sbjct: 122 CDHWSRVLHSYRELPMKYNQWCSVVRWEK--TTRPFLRSREFWWQEGHTIHETAAEAEAE 179

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            +      +                            D  E  +   +   + + +++  
Sbjct: 180 TQQQLNCYA----------------------------DVCEQDLAIPVVKGRKTDKEKF- 210

Query: 465 TGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMI 523
                  GA      E ++KD  G+  Q GT           ++  +    ++  HP   
Sbjct: 211 ------AGAEATYTIEAMMKD--GKALQSGTSHYFGDKFSKAYDVTFTGRDNQLHHPF-- 260

Query: 524 HRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTI---TSSAVEYAQEIANLLK 576
            +  +G   R +G +I     +    LP  ++PIQ +V  I        E A E+A  + 
Sbjct: 261 -QTSWGVSTRLVGAIIMTHGDDDGLILPPAVAPIQVVVVPIAAHKPGVSEKAAELAEKIS 319

Query: 577 SHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
            +   ++ D  +    +K  +  +K +P+ +  G K+  +    + R  +     VSL +
Sbjct: 320 KY-ARVKLDDSDNAPGWKFSQWEMKGVPLRLEIGPKDLEKNQCVLVRRDTREKIFVSLDE 378

Query: 637 ---AIPILTKESLPPDC 650
              AIP    E+L  D 
Sbjct: 379 LETAIPA-QLEALRKDL 394


>gi|329929336|ref|ZP_08283089.1| proline--tRNA ligase [Paenibacillus sp. HGF5]
 gi|328936705|gb|EGG33148.1| proline--tRNA ligase [Paenibacillus sp. HGF5]
          Length = 485

 Score =  164 bits (415), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 73/419 (17%), Positives = 153/419 (36%), Gaps = 59/419 (14%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
             E   R +  + ++ DL   +    G I +   G++I++ + + + R+ K   +     
Sbjct: 17  QGEDFSRWYIDVIKKADLMDYSPVR-GCIVFKPDGYEIWEHIQAELDRRFKATGHRNAYF 75

Query: 297 PQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P  + +  + ++  H + +   +  V  A     + R  A++P +      +++  ++SY
Sbjct: 76  PLFIPESFFQKEKEHVEGFNPELPWVTEAAGEKLEER-LAIRPTSETMFGHMYSKWIQSY 134

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN-ECLKIHNLIISI 414
           R+LPV + ++ +V R E        +R   F   + H     E     E +++ ++    
Sbjct: 135 RDLPVLINQWANVVRWEKR--TLPFLRTSEFLWQEGHTAHETEAEARGETMQMLDIYQQF 192

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            +D+    ++    T  EK  G                                    A 
Sbjct: 193 VEDYLAIPVIKGQKTPSEKFAG------------------------------------AV 216

Query: 475 YGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
                E ++KD  GR  Q GT      N    F+  Y+N  +   +    H   +G   R
Sbjct: 217 DTFSIEAMMKD--GRAVQAGTSHYMGTNFSQAFDIQYLNRENTLEYA---HTTSWGVSTR 271

Query: 534 FIGIMI----ENFKGNLPLWLSPIQAIVTTIT-----SSAVEYAQEIANLLKSHHLSIET 584
            IG +I    ++    LP  ++P Q I+  I       + V    E+   LKS  + +  
Sbjct: 272 LIGSLIMVHGDDRGLVLPPKVAPTQVIMIPIGPPKTRDAVVGRTDELFRELKSAGIRVRV 331

Query: 585 DFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           D   +    +K  E+ ++ +P+ +  G ++       +    +   + V   + I  + 
Sbjct: 332 DDNPDVRPGWKFNEYEMRGVPVRLEIGPRDMENGVCVLVSRITGEKKVVEQANLIQEVQ 390


>gi|307106736|gb|EFN54981.1| hypothetical protein CHLNCDRAFT_24199 [Chlorella variabilis]
          Length = 572

 Score =  164 bits (414), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 62/411 (15%), Positives = 151/411 (36%), Gaps = 47/411 (11%)

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
            R +  + RE  L         ++     G+ I++ + S++ R  K+  ++    PQ++ 
Sbjct: 88  SRWYLDVVRECQLADYGPVRGTMVI-RPYGYAIWEGVQSHLDRAFKETGHQNAYFPQLIP 146

Query: 302 QHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
                +++ H + +   +  V        +     ++P +      +F   ++SYR+LP+
Sbjct: 147 LSFLQKEADHVEGFAPELALVTKGGGKELE-EPLVVRPTSETIVNHMFAQWVQSYRDLPL 205

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFG 419
            + ++ +V+R E        +R   F   + H    T ++   E +++  +      +  
Sbjct: 206 LINQWANVHRWEMR--TRPFVRTLEFLWQEGHTAHATAQEAEEETIRMLRVYEDFAVNVA 263

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
              ++    +R E   G++  +     I   + D     ++ R   G   G         
Sbjct: 264 AMPVVAGRKSRIESFAGANCTY----TIEAMMGDRRALQARRRAPWGRQEGA-------- 311

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
                          +  +  N    F   Y++   +  +   +H++ +G   R +G +I
Sbjct: 312 ----------RLAGTSHNLGDNFARAFGTRYLDEGGQLQY---VHQSSWGVSTRMVGGII 358

Query: 540 ENFKGN----LPLWLSPIQAIVTTI------TSSAVEYAQEIANLLKSHHLSIETDFR-N 588
                +    LP  L+P Q ++  I        + +   Q +   L+   + ++ D   +
Sbjct: 359 MTHGDDAGLRLPPRLAPTQVVIVPILKKDVDGEAVMAAVQRLEAALRGAGVRVQVDASTD 418

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERS-IGIRRF---GSTTTQKVSLL 635
            T  +K  ++ +K +P+ +  G ++  + + +  RR           V L 
Sbjct: 419 RTPGWKFNQYEMKGVPVRVEVGPRDVEQGTCVTARRDVAGKEGKQFGVPLE 469


>gi|301613124|ref|XP_002936063.1| PREDICTED: bifunctional aminoacyl-tRNA synthetase isoform 1 [Xenopus
            (Silurana) tropicalis]
          Length = 1708

 Score =  164 bits (414), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 73/437 (16%), Positives = 144/437 (32%), Gaps = 60/437 (13%)

Query: 226  NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
              +Q         EE+    + ++  + ++     D SG        + I++ +  +  +
Sbjct: 1204 PKKQTRLGLEAKKEENLPDWYSQVITKSEMIEY-YDVSGCYVLRPWAFAIWEAIKEFFDK 1262

Query: 286  KIKD-DYEEINTPQVLD-QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPG 343
            +IK    E    P  +    L ++  H   +   +  V  +  T       A++P +   
Sbjct: 1263 EIKKLGVENCYFPMFVSQAALEKEKTHIADFAPEVAWVTRSGKTEL-AEPIAVRPTSETV 1321

Query: 344  HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFN 402
                +   ++S+R+LP++L ++ +V R E        +R R F   + H  F T E+   
Sbjct: 1322 MYPAYAKWVQSHRDLPIKLNQWCNVVRWEFK-HPQPFLRTREFLWQEGHTAFATYEEAAE 1380

Query: 403  ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
            E L+I +L   +Y+D     ++    T  EK  G D                        
Sbjct: 1381 EVLQILDLYARVYEDLLAIPVVKGRKTEKEKFAGGD------------------------ 1416

Query: 463  INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
                        Y    E     A  R  Q  T        S+                 
Sbjct: 1417 ------------YTTTVE-AFISASSRAIQGATSHHLGQNFSKMFEIVFEDPKTPGLKQY 1463

Query: 523  IHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTT----------ITSSAVEYA 568
             ++  +G   R IG M      N+ + L P    +Q I+               + ++  
Sbjct: 1464 AYQNSWGLSTRTIGAMTMVHADNIGMVLPPRVACVQVIIIPCGITNTLSEEDKDALLKKC 1523

Query: 569  QEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERS-IGIRRFGS 626
             +    L +  +    D R+  +  +K     +K +PI +  G ++   +  + +R   +
Sbjct: 1524 DQYLKRLLNVDVRARADVRDNYSPGWKFNHWELKGVPIRLEVGPRDMKNKQFVAVR-RDN 1582

Query: 627  TTTQKVSLLDAIPILTK 643
               Q +S   A   L +
Sbjct: 1583 GEKQTISEDQAETRLKE 1599


>gi|330791323|ref|XP_003283743.1| prolyl-tRNA synthetase [Dictyostelium purpureum]
 gi|325086366|gb|EGC39757.1| prolyl-tRNA synthetase [Dictyostelium purpureum]
          Length = 530

 Score =  164 bits (414), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 76/421 (18%), Positives = 156/421 (37%), Gaps = 56/421 (13%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
             E+     +  +    ++     D SG        + I++ + ++   +IK  D +   
Sbjct: 33  KKEDDFSEWYTNVITRSEMIDY-YDISGCYILRPWAYSIWEQIQAFFDSEIKKLDVQNAY 91

Query: 296 TPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
            P ++ +     +  H + +   +  V  +  +       A++P +       + + ++S
Sbjct: 92  FPLLVSEKALTTEKDHIEGFAPEVAWVTKSGGSDL-ADPVAIRPTSETIMYPAYANWIRS 150

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIIS 413
           +R+LP++L ++ +V R E    +   +R R F   + H  F  KE+   E   I +L   
Sbjct: 151 HRDLPLKLNQWVNVVRWEFKRPV-PFLRSREFLWQEGHTAFANKEEADQEVYTILDLYRR 209

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           +Y++                                     +       + +      G 
Sbjct: 210 VYEEL------------------------------------LCVPVVKGVKSEKEKFAGG 233

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
            Y    E  +    GR  Q  T        S+   F +   ++K    +  +  +G   R
Sbjct: 234 LYTTTIEGFIPT-NGRGIQAATSHCLGQNFSK--MFNIEFENDKGGKSLAWQNSWGLTTR 290

Query: 534 FIGIMI----ENFKGNLPLWLSPIQAIVTT------ITSSAVEYAQEIANLLKSHHLSIE 583
            IG+MI    ++    LP  ++PIQA+V         T++    A+EIA+ LK+  + + 
Sbjct: 291 TIGVMIMLHGDDKGLVLPPRIAPIQAVVIPLHFKDADTTAVDTKAKEIADSLKAAGIRVN 350

Query: 584 TDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            D R N    +K     +K +PI I  G K+ +  S+   R  +    KV + + +  + 
Sbjct: 351 LDNRPNYNPGHKYNHWELKGVPIRIEIGPKDVASGSVICCRRDTAEKSKVEISNIVNGVK 410

Query: 643 K 643
           +
Sbjct: 411 E 411


>gi|255013835|ref|ZP_05285961.1| prolyl-tRNA synthetase [Bacteroides sp. 2_1_7]
 gi|256839822|ref|ZP_05545331.1| prolyl-tRNA synthetase [Parabacteroides sp. D13]
 gi|298375581|ref|ZP_06985538.1| proline--tRNA ligase [Bacteroides sp. 3_1_19]
 gi|256738752|gb|EEU52077.1| prolyl-tRNA synthetase [Parabacteroides sp. D13]
 gi|298268081|gb|EFI09737.1| proline--tRNA ligase [Bacteroides sp. 3_1_19]
          Length = 493

 Score =  164 bits (414), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 70/438 (15%), Positives = 159/438 (36%), Gaps = 75/438 (17%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
              +  + ++ L  + DL   +     ++     G+ I++ +   +    K+  +     
Sbjct: 11  RSVNYSQWYQDLVIKADLAENSAVRGCMVI-KPYGYAIWEKMQRILDDMFKETGHVNAYF 69

Query: 297 PQVLDQHLW-QQSGHWDSYRANMFAVKCA-------------DDTIKDLRTFALKPMNCP 342
           P ++ +    +++ H + +      V                D   K      ++P +  
Sbjct: 70  PLLIPKSFLSKEAEHVEGFAKECAVVTHYRLKTNHDGTGVVVDPAAKLEEELIIRPTSET 129

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMF 401
                + + ++SYR+LP+   ++ +V R E        +R   F   + H    T+E+  
Sbjct: 130 IIWNTYRNWIQSYRDLPILCNQWANVMRWEMR--TRLFLRTAEFLWQEGHTAHATREEAE 187

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E  K+      +Y +F                                  + +      
Sbjct: 188 IEAKKM----QEVYANF--------------------------------AENYMAMPVIK 211

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHP 520
            + +      GA      E +++D  G+  Q GT   +  N    F+  +++ + +  + 
Sbjct: 212 GVKSESERFAGALDTYTIEAMMQD--GKALQAGTSHFLGQNFGKAFDVTFIDKNGKSDYA 269

Query: 521 VMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVEYAQE------ 570
                  +G   R IG +I    ++    LP  L+PIQ ++  I  SA + AQ       
Sbjct: 270 WA---TSWGVSTRLIGALIMSHSDDNGLVLPPHLAPIQVVIVPIYRSAEQLAQISEKVAG 326

Query: 571 IANLLKSHHLSIETDF-RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           I   LK+  +S++ D   N+   +K  E+ +K +P+ +  G ++    +I + R  +   
Sbjct: 327 IVAKLKALGISVKYDDADNKKPGWKFAEYELKGVPVRLAMGGRDLENNTIEVMRRDTLEK 386

Query: 630 QKVS---LLDAIPILTKE 644
           + ++   + + +  L +E
Sbjct: 387 ETITCDGIEEYVKNLLEE 404


>gi|281344737|gb|EFB20321.1| hypothetical protein PANDA_008733 [Ailuropoda melanoleuca]
          Length = 1495

 Score =  164 bits (414), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 76/435 (17%), Positives = 146/435 (33%), Gaps = 60/435 (13%)

Query: 226  NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
              +Q         EE+    + ++  + +L     D SG        + I++++  +   
Sbjct: 991  PKKQTRLGLEAKKEENLADWYSQVITKSELIEY-YDVSGCYILRPWAYSIWESIKDFFDA 1049

Query: 286  KIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPG 343
            +IK    E    P  + Q   + +  H   +   +  V  +  T       A++P +   
Sbjct: 1050 EIKKLGVENCYFPMFVSQGALEKEKTHIADFAPEVAWVTRSGKTEL-AEPIAVRPTSETV 1108

Query: 344  HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFN 402
                +   ++S+R+LP+RL ++ +V R E        +R R F   + H  F T E+   
Sbjct: 1109 MYPAYAKWVQSHRDLPIRLNQWCNVVRWEFKHP-QPFLRTREFLWQEGHSAFATFEEAAE 1167

Query: 403  ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
            E L+I +L   +Y++     ++    T  EK  G D                        
Sbjct: 1168 EVLQILDLYAQVYEELLAIPVVKGRKTEKEKFAGGD------------------------ 1203

Query: 463  INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
                        Y    E  +  A GR  Q  T        S+                 
Sbjct: 1204 ------------YTTTLEVFI-SASGRAIQGATSHHLGQNFSKMFEIIFEDPKTPGEKQF 1250

Query: 523  IHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTT----------ITSSAVEYA 568
             ++  +G   R IG+M      N+ L L P    +Q +V               + +   
Sbjct: 1251 AYQNSWGLTTRTIGVMTMVHGDNMGLVLPPRVASVQVVVIPCGITNALSEEDREALIAKC 1310

Query: 569  QEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERS-IGIRRFGS 626
             +    L S ++ +  D R+  +  +K     +K +PI +  G ++      + +R   +
Sbjct: 1311 NDYRKRLLSVNIRVRVDLRDNYSPGWKFNHWELKGVPIRLEVGPRDMKSCQFVAVR-RDT 1369

Query: 627  TTTQKVSLLDAIPIL 641
                 V+  +A   L
Sbjct: 1370 GEKLTVADNEAETKL 1384


>gi|159904581|ref|YP_001548243.1| prolyl-tRNA synthetase [Methanococcus maripaludis C6]
 gi|259511605|sp|A9A787|SYP_METM6 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|159886074|gb|ABX01011.1| prolyl-tRNA synthetase [Methanococcus maripaludis C6]
          Length = 460

 Score =  164 bits (414), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 75/427 (17%), Positives = 159/427 (37%), Gaps = 63/427 (14%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
                 +  +  +  ++ +     G   +   G+KI +     +R+ + + +++E   P 
Sbjct: 1   MEFSEWYSDILEKAGIYDLRYPIKGCGVYLPYGFKIRRYSFEILRKLLDETNHDETLFPM 60

Query: 299 VLDQHLWQQSG-HWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           ++ ++L  + G H   +   +F V     T  +++  AL+P +      +    +K + +
Sbjct: 61  LIPENLLAKEGEHIKGFEDEVFWVTHGGKTPLEVK-LALRPTSETTMYYMMKQWIKVHTD 119

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRG-FTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           LP++L +  + +R E       L+R+R   +  +AH   T      +C       +++Y 
Sbjct: 120 LPMKLYQVVNTFRYETK-HTRPLIRLREIMSFKEAH---TAHATKEDCDAQITEALNLYG 175

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           +F  E  +  + ++  +       WD                             GA Y 
Sbjct: 176 EFFDEICVPYIISKRPE-------WDKF--------------------------PGADYT 202

Query: 477 PKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
             F+ I  D  G+  Q GT+  +  N    F   +     EK     +++  +G  +R I
Sbjct: 203 MAFDTIYPD--GKTMQIGTVHNLGQNFAKTFELEFETPDGEKD---FVYQTCYGISDRAI 257

Query: 536 GIMIENFKGNLPLWL----SPIQAIVTTI-----TSSAVEYAQEIANLLKSHHLSIETDF 586
             +I        L +    +PIQ ++  +         ++  +E+   LKS    +  D 
Sbjct: 258 ASLISVHGDEKGLVIPVDVAPIQIVLIPLLFKGKEEIVMDKIKELNRTLKSE-FRVLLDD 316

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS---LLDAIPILT- 642
           R+     K  +  IK +P+ I  G ++       I R  +     V    +L+ +  +  
Sbjct: 317 RDIRPGRKYNDWEIKGVPLRIELGPRDIENGQALIVRRDTGEKITVEYSNILEEVEKIVS 376

Query: 643 --KESLP 647
             KE+L 
Sbjct: 377 MYKENLK 383


>gi|261407942|ref|YP_003244183.1| prolyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
 gi|261284405|gb|ACX66376.1| prolyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
          Length = 485

 Score =  164 bits (414), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 73/419 (17%), Positives = 153/419 (36%), Gaps = 59/419 (14%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
             E   R +  + ++ DL   +    G I +   G++I++ + + + R+ K   +     
Sbjct: 17  QGEDFSRWYIDVIKKADLMDYSPVR-GCIVFKPDGYEIWEHIQAELDRRFKATGHRNAYF 75

Query: 297 PQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P  + +  + ++  H + +   +  V  A     + R  A++P +      +++  ++SY
Sbjct: 76  PLFIPESFFQKEKEHVEGFNPELPWVTEAAGEKLEER-LAIRPTSETMFGHMYSKWIQSY 134

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN-ECLKIHNLIISI 414
           R+LPV + ++ +V R E        +R   F   + H     E     E +++ ++    
Sbjct: 135 RDLPVLINQWANVVRWEKR--TLPFLRTSEFLWQEGHTAHETEAEARGETMQMLDIYQQF 192

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            +D+    ++    T  EK  G                                    A 
Sbjct: 193 VEDYLAIPVIKGQKTPSEKFAG------------------------------------AV 216

Query: 475 YGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
                E ++KD  GR  Q GT      N    F+  Y+N  +   +    H   +G   R
Sbjct: 217 DTFSIEAMMKD--GRAVQAGTSHYMGTNFSQAFDIQYLNRENTLEYA---HTTSWGVSTR 271

Query: 534 FIGIMI----ENFKGNLPLWLSPIQAIVTTIT-----SSAVEYAQEIANLLKSHHLSIET 584
            IG +I    ++    LP  ++P Q I+  I       + V    E+   LKS  + +  
Sbjct: 272 LIGSLIMVHGDDRGLVLPPKVAPTQVIMIPIGPPKTRDAVVGRTDELFRELKSAGIRVRV 331

Query: 585 DFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           D   +    +K  E+ ++ +P+ +  G ++       +    +   + V   + I  + 
Sbjct: 332 DDNPDVRPGWKFNEYEMRGVPVRLEIGPRDMENGVCVLVSRITGEKKVVEQANLIQEVQ 390


>gi|311029306|ref|ZP_07707396.1| prolyl-tRNA synthetase [Bacillus sp. m3-13]
          Length = 477

 Score =  164 bits (414), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 67/437 (15%), Positives = 163/437 (37%), Gaps = 59/437 (13%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           + +   + +  ++E   + +  +  + +L   +     +I     G+ +++ +   + ++
Sbjct: 2   SNKNFVEKITNMDEDFAQWYTDVVTKAELVDYSSVRGSMII-RPYGYALWENIKDALDKR 60

Query: 287 IKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           IK+  +E +  P  + + L  ++  H + +   +  V    D     R   ++P +    
Sbjct: 61  IKETGHENVYMPLFIPESLLQKEKDHIEGFAPEVAWVTHGGDEKLQER-LVVRPTSEVLF 119

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNE 403
              + + + SYR+LP    ++ +V R E   +    +R   F   + H    T EQ   E
Sbjct: 120 GEHYKNIIHSYRDLPKLYNQWANVVRWEK--TTRPFLRTLEFLWQEGHTCHETDEQAHEE 177

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            +K+ N+   I ++     ++    T  EK  G                           
Sbjct: 178 TVKMLNVYAEICENILAIPVIKGQKTEKEKFAG--------------------------- 210

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQ-CGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
                    A Y    E ++ D  G+  Q   +  +       F   ++N   ++ +   
Sbjct: 211 ---------AKYTYTIESLMHD--GKALQSATSHHLGDGFAKAFGIQFLNREGKQEY--- 256

Query: 523 IHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIANLL 575
           + +  +G   R IG MI    ++    +P  ++P Q ++  I       +++A ++   L
Sbjct: 257 VQQTSWGFTTRIIGAMIMVHGDDRGLVVPPRIAPTQVMIVPIAQHKEGVLDFAYDLKEKL 316

Query: 576 KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
               + +  D  ++   +K  E+ +K IP+ +  G ++  ++ + + R  +       + 
Sbjct: 317 SEF-IRVGIDASDKKPGWKFNEYEMKGIPLRLEAGPRDIEQQQVVLVRRDTGEKLITPME 375

Query: 636 DAIPILTKESLPPDCQK 652
                + +  +  D QK
Sbjct: 376 GLEAKIQE--ILEDIQK 390


>gi|126179985|ref|YP_001047950.1| prolyl-tRNA synthetase [Methanoculleus marisnigri JR1]
 gi|152112929|sp|A3CX68|SYP_METMJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|125862779|gb|ABN57968.1| prolyl-tRNA synthetase [Methanoculleus marisnigri JR1]
          Length = 477

 Score =  164 bits (414), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 67/422 (15%), Positives = 158/422 (37%), Gaps = 59/422 (13%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTP 297
            +E+    +  +    ++  +     G+  W+  G+ I +     +R  +  D+ E   P
Sbjct: 10  RKENFSEWYNDILWRAEIMDVRYPVKGLYVWYPHGFGIRKRAYGVLRDLMDRDHAETMFP 69

Query: 298 QVLDQ-HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
            ++ +    +++ H   +   ++ V        D+   AL+P +      ++   ++S+ 
Sbjct: 70  LLIPKTEFMKEAEHIKGFEDEVYWVTHGGRNELDV-PLALRPTSETAIYPMYALWIRSHT 128

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT-QDDAHVFC-TKEQMFNECLKIHNLIISI 414
           +LP+RL +  + +R E       L+R+R  T   +AH    T+E+   +      L    
Sbjct: 129 DLPLRLYQVVNTFRYETK-HTRPLIRLREITSFKEAHTVHATREEAAAQVETAIALYREF 187

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           Y       I+ +              WD                             GA 
Sbjct: 188 YDTLRVPVILSRRPA-----------WDKF--------------------------PGAD 210

Query: 475 YGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           Y    + I+ D  G+  Q GT+  +  +    +   Y +++ E+ +    ++  +G  ER
Sbjct: 211 YTIAADTIMPD--GKTLQIGTVHMLGDHFSRTYAITYEDANGEQQYA---YQTCYGISER 265

Query: 534 FIGIMI----ENFKGNLPLWLSPIQAIVTTIT-----SSAVEYAQEIANLLKSHHLSIET 584
            I  ++    ++    LP  ++P++ ++  I         +  A  +   L+    +++ 
Sbjct: 266 SIAAVVSVHGDDKGLVLPPEVAPLEVVIVPIIVGKRRDEVLASAAALEAELRGAGFAVKL 325

Query: 585 DFRNETINYKIREHSIKKIPIIIICGDKEASERS-IGIRRFGSTTT-QKVSLLDAIPILT 642
           D R+     K     ++ +P+ +  G ++    + + + R G  TT  +  +++ I  + 
Sbjct: 326 DARDMRPGAKYYHWEMRGVPLRVEVGPRDIDANTVVAVARTGKKTTLDRRGVVEGITSVL 385

Query: 643 KE 644
            E
Sbjct: 386 AE 387


>gi|255535772|ref|YP_003096143.1| prolyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10]
 gi|255341968|gb|ACU08081.1| Prolyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10]
          Length = 491

 Score =  164 bits (414), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 76/438 (17%), Positives = 164/438 (37%), Gaps = 76/438 (17%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
             E   + + +L  + DL   +     ++     G+ I++ +   M ++ K+  +E    
Sbjct: 7   RAEDYSKWYNELVVKADLAENSGVRGCMVI-KPYGYAIWEKMRDEMDKRFKETGHENAYF 65

Query: 297 PQVLDQHLWQ-QSGHWDSYRANMFAVKCA--------------DDTIKDLRTFALKPMNC 341
           P  + + L++ +  + + +      V                 D   K      ++P + 
Sbjct: 66  PIFIPKSLFEAEEKNAEGFAKECAVVTHYRLKTDPNDPKKLVVDPEAKLEEELIVRPTSE 125

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQM 400
                 + + ++SYR+LP+ + ++ +V R E        +R   F   + H    T+++ 
Sbjct: 126 AIIWNTYKNWVQSYRDLPILINQWANVVRWEMR--TRLFLRTAEFLWQEGHTAHATRDEA 183

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQ 460
             E  K+ ++     ++F    ++  + T  E+  G+D  +                   
Sbjct: 184 LEETEKMLDVYADFTENFMAIPVIRGIKTESERFAGADETY------------------- 224

Query: 461 DRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCH 519
                              E +++D  G+  Q GT   +  N    F+  + N   +  H
Sbjct: 225 -----------------CIEALMQD--GKALQAGTSHFLGQNFGKAFDVKFTNREGKIEH 265

Query: 520 PVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVEY------AQ 569
                   +G+  R +G +I    ++    LP  L+PIQ ++  I     +       A 
Sbjct: 266 A---WGTSWGTSTRLVGALIMTHSDDLGLVLPPSLAPIQVVIVPIFKGEEQLSQIDAVAY 322

Query: 570 EIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
           ++   LK+  +S++ D R E    +K  E+ +K +PI I  G ++   +++ I R  + T
Sbjct: 323 DLQAKLKAKGISVKYDNRTENKPGWKFAEYELKGVPIRIAMGARDLENKTVEIARRDNLT 382

Query: 629 TQKVSL---LDAIPILTK 643
            +   L    + I  L K
Sbjct: 383 KETQPLEGIENYIEELLK 400


>gi|333030425|ref|ZP_08458486.1| Prolyl-tRNA synthetase [Bacteroides coprosuis DSM 18011]
 gi|332741022|gb|EGJ71504.1| Prolyl-tRNA synthetase [Bacteroides coprosuis DSM 18011]
          Length = 493

 Score =  164 bits (414), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 68/438 (15%), Positives = 156/438 (35%), Gaps = 73/438 (16%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
               +  + + +L  + DL   +     ++     G+ I++ +   +    K+  +    
Sbjct: 10  KRSVNYSQWYNELVVKADLAEQSAVRGCMVI-KPYGYAIWEKMQRQLDDMFKETGHVNAY 68

Query: 296 TPQVLDQHLW-QQSGHWDSYRANMFAVKCA-------------DDTIKDLRTFALKPMNC 341
            P ++ +    +++ H + +      V                D   K      ++P + 
Sbjct: 69  FPLLIPKSFLSREADHVEGFAKECAVVTHYRLKNAEDGSGVVVDPEAKLEEELIIRPTSE 128

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
                 + + ++SYR+LP+   ++ +V+R E        +R   F   + H   T  +  
Sbjct: 129 TIIWNTYKNWIQSYRDLPILCNQWANVFRWEMR--TRLFLRTAEFLWQEGH---TAHETR 183

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E  +    ++++Y +F                                    +      
Sbjct: 184 EEAEEETVKMLNVYSEF--------------------------------AEKYMAVPVVK 211

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHP 520
            + T      GA      E +++D  G+  Q GT   +  N    F+  +VN  ++  + 
Sbjct: 212 GVKTASERFAGALDTYTIEAMMQD--GKALQSGTSHFLGQNFAKAFDVKFVNRENQLEY- 268

Query: 521 VMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVEYAQE------ 570
             +    +G   R +G +I    ++    LP  L+PIQ ++  I     + A+       
Sbjct: 269 --VWATSWGVSTRLMGALIMTHSDDNGLVLPPALAPIQVVIVPIFKGEEQLAKIDERVNP 326

Query: 571 IANLLKSHHLSIETDF-RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           I N LK   +S++ D   N+   +K  ++ +K +P+ ++ G ++    +I + R  +   
Sbjct: 327 IINKLKGMGVSVKYDNADNKRPGFKFADYELKGVPVRLVLGARDLENGTIEVMRRDTLEK 386

Query: 630 QKVS---LLDAIPILTKE 644
              S   + + +  L  E
Sbjct: 387 TTHSIEGIEEYVKDLLDE 404


>gi|74006040|ref|XP_858912.1| PREDICTED: similar to glutamyl-prolyl tRNA synthetase isoform 4
            [Canis familiaris]
          Length = 1465

 Score =  163 bits (413), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 75/436 (17%), Positives = 146/436 (33%), Gaps = 60/436 (13%)

Query: 226  NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
              +Q         EE+    + ++  + ++     D SG        + I++++  +   
Sbjct: 961  PKKQTRLGLEAKKEENLADWYSQVITKSEMIEY-YDVSGCYILRPWAYSIWESIKDFFDA 1019

Query: 286  KIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPG 343
            +IK    E    P  + Q   + +  H   +   +  V  +  T       A++P +   
Sbjct: 1020 EIKKLGVENCYFPMFVSQGALEKEKTHVADFAPEVAWVTRSGKTEL-AEPIAVRPTSETV 1078

Query: 344  HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFN 402
                +   ++S+R+LP+RL ++ +V R E        +R R F   + H  F T E+   
Sbjct: 1079 MYPAYAKWVQSHRDLPIRLNQWCNVVRWEFK-HPQPFLRTREFLWQEGHSAFATFEEAAE 1137

Query: 403  ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
            E L+I +L   +Y++     ++    T  EK  G D                        
Sbjct: 1138 EVLQILDLYAKVYEELLAIPVVKGRKTEKEKFAGGD------------------------ 1173

Query: 463  INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
                        Y    E     A GR  Q  T        S+                 
Sbjct: 1174 ------------YTTTIE-AFISASGRAIQGATSHHLGQNFSKMFEIIFEDPKTPGEKQF 1220

Query: 523  IHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTT----------ITSSAVEYA 568
             ++  +G   R IG+M      N+ L L P    +Q +V               + +   
Sbjct: 1221 AYQNSWGLTTRTIGVMTMVHGDNMGLVLPPRVASVQVVVIPCGITNALSEEDRDALIIKC 1280

Query: 569  QEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERS-IGIRRFGS 626
             +    L S ++ ++ D R+  +  +K     +K +PI +  G ++      + +R   +
Sbjct: 1281 NDYRRRLLSVNVRVKVDLRDNYSPGWKFNHWELKGVPIRLEVGPRDMKSCQFVAVR-RDT 1339

Query: 627  TTTQKVSLLDAIPILT 642
                 V+  +A   L 
Sbjct: 1340 GEKLTVADNEAETKLK 1355


>gi|255034032|ref|YP_003084653.1| prolyl-tRNA synthetase [Dyadobacter fermentans DSM 18053]
 gi|254946788|gb|ACT91488.1| prolyl-tRNA synthetase [Dyadobacter fermentans DSM 18053]
          Length = 491

 Score =  163 bits (413), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 68/433 (15%), Positives = 153/433 (35%), Gaps = 70/433 (16%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
             E+    + +L +  DL   +     ++     G+ I++ +   +    K+  +     
Sbjct: 8   RSENYSEWYNELVKRADLAENSPVRGCMVI-KPYGYSIWEKMQRALDDMFKETGHTNAYF 66

Query: 297 PQVLDQH-LWQQSGHWDSYRANMFAVKCA-------------DDTIKDLRTFALKPMNCP 342
           P  + +  L +++ H + +      V                D   K      ++P +  
Sbjct: 67  PLFIPKSYLSKEASHVEGFAKECAVVTHYRLKNDPDGKGVIVDPDAKLEEELIVRPTSET 126

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN 402
              + + + ++SYR+LP+ + ++ +V R E        +R   F   + H   T      
Sbjct: 127 VIWSTYKNWIQSYRDLPLLINQWANVVRWEMR--TRLFLRTAEFLWQEGH---TAHATAQ 181

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
           E +     ++ +Y  F                                  + +       
Sbjct: 182 EAIAETKQMLEVYAQF--------------------------------AEEWMAVPVIKG 209

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPV 521
           + T      GA      E +++D  G+  Q GT   +  N  + F+  + +   +  +  
Sbjct: 210 VKTANERFAGAEDTYCIEAMMQD--GKALQAGTSHFLGQNFANAFDVKFQDKEGKLDY-- 265

Query: 522 MIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVEYAQ------EI 571
            +    +G   R +G +I    ++    LP  L+PIQ ++  I  +  + AQ      EI
Sbjct: 266 -VWGTSWGVSTRLMGALIMAHSDDAGLVLPPKLAPIQVVIVPIYRNDEQLAQISEKVAEI 324

Query: 572 ANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
              LK   +S++ D  +     +K  E+ +K +P+ +  G ++    ++ + R  + T +
Sbjct: 325 TKDLKKLGISVKYDSSDNAKPGFKFAEYELKGVPVRLAMGGRDLENGTVEVARRDTKTKE 384

Query: 631 KVSLLDAIPILTK 643
            VS+      +  
Sbjct: 385 TVSVAGIAAYVQN 397


>gi|315425642|dbj|BAJ47301.1| prolyl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum]
          Length = 484

 Score =  163 bits (413), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 68/428 (15%), Positives = 152/428 (35%), Gaps = 59/428 (13%)

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISY 282
             +      T        +      KL  E  +        G   +   G  I + +   
Sbjct: 1   MGFFYGLMSTATALNKYRNFSEWFDKLLLEARIVDDRFPVKGFSVYLENGAYILRRVREM 60

Query: 283 MRRKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
           + +++++  ++E+  P V  + L  +++ H   +   +F ++ A     D++   ++P +
Sbjct: 61  LEKELRETGHKEMIFPLVTTEELLGKEAQHIKGFSTEVFVIESAGGKPLDVK-LIVRPTS 119

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
                 +F   ++S+ +LP+ + +   VYR+E   +   L+RVR    ++AH        
Sbjct: 120 ETIMYPMFKLWIRSHADLPLLVHQSNMVYRHETK-ATRPLLRVREIPWNEAHTVHATAAE 178

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQ 460
             + ++                                     A  I + VLD +  +  
Sbjct: 179 AEQQVR------------------------------------KAVEIYRKVLDQLGLAYL 202

Query: 461 DRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCH 519
                      GA Y   F+    +  GR  Q  T+  +  N    F   +     ++ +
Sbjct: 203 VLKRPDFDKFPGARYSIAFD--AWNPDGRVNQVATVHNLGKNFSKVFEIEFETRDGKREN 260

Query: 520 PVMIHRAVFG-SIERFIGIMI----ENFKGNLPLWLSPIQAIVTTIT-----SSAVEYAQ 569
           P   H+  +G    R +  +I    ++    LP  ++P+  ++  I       S  ++  
Sbjct: 261 P---HQLCYGFGYSRVLAALISQHGDDRGLVLPPVVAPLHVVIVPIVFKGQEESIKQFCH 317

Query: 570 EIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
            +A  L+    +++ D R + T   K        +P+ +  G +E +E    + R  +  
Sbjct: 318 SLAERLQK--FAVKVDDREDVTPGEKFYHWEKLGVPVRLEIGPREVAENRATLFRRDTLE 375

Query: 629 TQKVSLLD 636
            Q V++ +
Sbjct: 376 KQVVAVEE 383


>gi|313677792|ref|YP_004055788.1| prolyl-tRNA synthetase [Marivirga tractuosa DSM 4126]
 gi|312944490|gb|ADR23680.1| prolyl-tRNA synthetase [Marivirga tractuosa DSM 4126]
          Length = 491

 Score =  163 bits (413), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 69/438 (15%), Positives = 157/438 (35%), Gaps = 73/438 (16%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
              E     + +L ++ DL   +     +I     G+ I++ +   +    K+  ++   
Sbjct: 7   KRSEDYSLWYNELVKKADLAENSAVRGCMII-KPYGFSIWEKMQRELDDMFKETGHQNAY 65

Query: 296 TPQVLDQ-----------HLWQQSGHWDSYR---ANMFAVKCADDTIKDLRTFALKPMNC 341
            P  + +              ++      YR            D   K      ++P + 
Sbjct: 66  FPLFIPKSYLSKEADHVEGFAKECAVVTHYRLKNDENGKGIVVDPDAKLEEELIVRPTSE 125

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQM 400
                 + + ++SYR+LP+ + ++ +V R E        +R   F   + H    TK++ 
Sbjct: 126 TIIWNTYRNWVQSYRDLPLLINQWANVVRWEMR--TRLFLRTAEFLWQEGHTAHATKQEA 183

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQ 460
             E  ++ N+     ++F    ++  L +  E+  G+   +                   
Sbjct: 184 IEETERMINIYADFAEEFMALPVIKGLKSESERFAGALETY------------------- 224

Query: 461 DRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCH 519
                              E +++D  G+  Q GT   +  N    F+  +     ++  
Sbjct: 225 -----------------CIEGLMQD--GKALQAGTSHFLGQNFAKAFDVKFATKEGKQE- 264

Query: 520 PVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTIT------SSAVEYAQ 569
              +    +G   R +G ++    ++    LP  L+PIQ ++  I           E A+
Sbjct: 265 --FVWGTSWGVSTRLMGALVMAHSDDEGLVLPPRLAPIQVVIVPIYKTDEEQQKITEVAE 322

Query: 570 EIANLLKSHHLSIETDFRN-ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
            +   LK   ++++ D R+     +K  E  +K +P+ I  G ++    ++ + R  +  
Sbjct: 323 NLRKSLKKKRITVKFDDRDTHKPGFKFAEWELKGVPLRIAIGPRDLDNGTVELARRDTKE 382

Query: 629 TQKVSLLDAIPILTKESL 646
            Q VS+ + I  + +++L
Sbjct: 383 KQTVSI-EGIESVIEDTL 399


>gi|66809829|ref|XP_638638.1| prolyl-tRNA synthetase [Dictyostelium discoideum AX4]
 gi|60467254|gb|EAL65287.1| prolyl-tRNA synthetase [Dictyostelium discoideum AX4]
          Length = 548

 Score =  163 bits (413), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 77/421 (18%), Positives = 158/421 (37%), Gaps = 56/421 (13%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
             EE     ++ +    ++     D SG        + I++ + ++   +IK  D +   
Sbjct: 51  KKEEDFSEWYQNVITRSEMIDY-YDISGCYILRPWAYSIWEQIQAFFDAEIKKLDVQNAY 109

Query: 296 TPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
            P ++ +     +  H + +   +  V  + D+       A++P +       + + ++S
Sbjct: 110 FPLLVSEKALTTEKDHIEGFAPEVAWVTKSGDSQL-ADPVAIRPTSETIMYPAYANWIRS 168

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIIS 413
           +R+LP++L ++ +V R E    +   +R R F   + H  F  KE+   E   I +L   
Sbjct: 169 HRDLPLKLNQWVNVVRWEFKRPV-PFLRSREFLWQEGHTAFANKEEADEEVFTILDLYRR 227

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           +Y++                                     +       + +      G 
Sbjct: 228 VYEEL------------------------------------LCVPVVKGVKSEKEKFAGG 251

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
            Y    E  +    GR  Q  T        S+   F +   ++K    +  +  +G   R
Sbjct: 252 LYTTTIEGFIPT-NGRGIQAATSHALGQNFSKM--FNIEFENDKGTKSLAWQNSWGLTTR 308

Query: 534 FIGIMI----ENFKGNLPLWLSPIQAIVTT------ITSSAVEYAQEIANLLKSHHLSIE 583
            IG+M+    ++    LP  +SPIQA+V         T++    A+EIA+ LK+  + + 
Sbjct: 309 TIGVMVMVHGDDKGLVLPPRISPIQAVVIPLHFKDSDTTAVDSKAKEIADQLKAAGIRVN 368

Query: 584 TDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            D R N    +K     +K +PI I  G K+ +  ++   R  +    KV + + +  + 
Sbjct: 369 LDNRPNYNPGHKYNHWELKGVPIRIEIGPKDVASGTVICCRRDTAEKSKVEISNIVTGVK 428

Query: 643 K 643
           +
Sbjct: 429 E 429


>gi|301613126|ref|XP_002936064.1| PREDICTED: bifunctional aminoacyl-tRNA synthetase isoform 2 [Xenopus
            (Silurana) tropicalis]
          Length = 1553

 Score =  163 bits (413), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 73/437 (16%), Positives = 144/437 (32%), Gaps = 60/437 (13%)

Query: 226  NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
              +Q         EE+    + ++  + ++     D SG        + I++ +  +  +
Sbjct: 1049 PKKQTRLGLEAKKEENLPDWYSQVITKSEMIEY-YDVSGCYVLRPWAFAIWEAIKEFFDK 1107

Query: 286  KIKD-DYEEINTPQVLD-QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPG 343
            +IK    E    P  +    L ++  H   +   +  V  +  T       A++P +   
Sbjct: 1108 EIKKLGVENCYFPMFVSQAALEKEKTHIADFAPEVAWVTRSGKTEL-AEPIAVRPTSETV 1166

Query: 344  HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFN 402
                +   ++S+R+LP++L ++ +V R E        +R R F   + H  F T E+   
Sbjct: 1167 MYPAYAKWVQSHRDLPIKLNQWCNVVRWEFK-HPQPFLRTREFLWQEGHTAFATYEEAAE 1225

Query: 403  ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
            E L+I +L   +Y+D     ++    T  EK  G D                        
Sbjct: 1226 EVLQILDLYARVYEDLLAIPVVKGRKTEKEKFAGGD------------------------ 1261

Query: 463  INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
                        Y    E     A  R  Q  T        S+                 
Sbjct: 1262 ------------YTTTVE-AFISASSRAIQGATSHHLGQNFSKMFEIVFEDPKTPGLKQY 1308

Query: 523  IHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTT----------ITSSAVEYA 568
             ++  +G   R IG M      N+ + L P    +Q I+               + ++  
Sbjct: 1309 AYQNSWGLSTRTIGAMTMVHADNIGMVLPPRVACVQVIIIPCGITNTLSEEDKDALLKKC 1368

Query: 569  QEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERS-IGIRRFGS 626
             +    L +  +    D R+  +  +K     +K +PI +  G ++   +  + +R   +
Sbjct: 1369 DQYLKRLLNVDVRARADVRDNYSPGWKFNHWELKGVPIRLEVGPRDMKNKQFVAVR-RDN 1427

Query: 627  TTTQKVSLLDAIPILTK 643
               Q +S   A   L +
Sbjct: 1428 GEKQTISEDQAETRLKE 1444


>gi|328773429|gb|EGF83466.1| hypothetical protein BATDEDRAFT_15636 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 504

 Score =  163 bits (413), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 75/399 (18%), Positives = 150/399 (37%), Gaps = 59/399 (14%)

Query: 256 FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLW-QQSGHWDS 313
                D SG        + I++ +  +    I++   E+   P  + +    ++  H + 
Sbjct: 25  MMDYYDISGCYIIRPWAYTIWKHIQKFFGSHIEELGVEDCYFPMFVPEKNLNKEKDHIEG 84

Query: 314 YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP 373
           +   +  V  A  +       A++P +       ++  ++S+R+LP+RL ++ +V R E 
Sbjct: 85  FSPEVAWVTRAGQSDL-AEPIAIRPTSETVMYPYYSTWIRSHRDLPLRLNQWCNVVRWEF 143

Query: 374 SGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
                  +R R F   + H  F TKE+   E L+I +L   +Y++     ++    +  E
Sbjct: 144 KHP-QPFLRTREFLWQEGHTAFATKEEADTEVLQILDLYRRVYEEILAVPVVPGRKSEKE 202

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
           K  G                                      Y    E  +    GR  Q
Sbjct: 203 KFAGG------------------------------------LYTTTVEGFVPTT-GRAIQ 225

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
           C T        S+   F +   ++    V + +  +G   R IG+M+     +  L L P
Sbjct: 226 CATSHCLGQNFSKM--FKILMENDARERVNVWQNSWGLTTRTIGVMVMVHGDDKGLILPP 283

Query: 553 ----IQAIVTTIT----------SSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIRE 597
               IQ +V  +           ++  + A+E+  +LK   +  ++D R+  +  YK   
Sbjct: 284 RVASIQVVVVPVGITAKTSLEDRAAINDKAEELTAVLKKAGIRSKSDCRDNYSPGYKYNH 343

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
             +K +P+ +  G K+ ++      R  +   Q++SL+D
Sbjct: 344 WELKGVPLRLEVGPKDIAKNETRCVRRDNGAAQQLSLVD 382


>gi|15827816|ref|NP_302079.1| prolyl-tRNA synthetase [Mycobacterium leprae TN]
 gi|221230293|ref|YP_002503709.1| prolyl-tRNA synthetase [Mycobacterium leprae Br4923]
 gi|13633969|sp|Q9Z5I7|SYP_MYCLE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|259511607|sp|B8ZRT2|SYP_MYCLB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|13093368|emb|CAC30504.1| prolyl tRNA synthetase [Mycobacterium leprae]
 gi|219933400|emb|CAR71648.1| prolyl tRNA synthetase [Mycobacterium leprae Br4923]
          Length = 480

 Score =  163 bits (413), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 74/425 (17%), Positives = 153/425 (36%), Gaps = 61/425 (14%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
             E+     + ++  +  L         ++     G++I++ L   +  KIK+  +E   
Sbjct: 10  RQEDDFSAWYNEVVAKAGLIDRGPAKGTMVI-RPYGYRIWELLQDELDSKIKELGHENAY 68

Query: 296 TPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
            P ++ ++ + +++ H + +   +  V  A           ++P +      +    + S
Sbjct: 69  FPMLIPENYFNREAEHVEGFHPELAVVTHAGGKEL-SEPLVIRPTSETVIGDMMAKWITS 127

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           +R+LP+RL ++ +V R E    +  L+R   F   + H         ++ L+     + I
Sbjct: 128 HRDLPLRLNQWSNVVRWELRPRM--LLRTIEFLWQEGHS---AHIEKSDALRETLFALDI 182

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           Y                                     D           T      GA 
Sbjct: 183 YTTL--------------------------------ARDMAAIPIVSGEKTAGERFAGAL 210

Query: 475 YGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
                E +++D  G+  Q  T      N    FN  Y  +  ++     +H   FG   R
Sbjct: 211 NTYTIEAMMRD--GKALQSATTHYLGDNFARAFNIRYTTAEEQQ---AFVHTTSFGLSTR 265

Query: 534 FIGIMIENFKGNLPLWL----SPIQAIVTTIT-----SSAVEYAQEIANLLKSHHLSIET 584
            IG ++     +  L L    +P Q ++  IT     S     A ++A  L++  +    
Sbjct: 266 MIGAIVMVHGDDKGLVLPPQVAPYQVVIVPITTGNKASEVGHAAADLARRLQAAGVRTHV 325

Query: 585 DFRNE-TINYKIREHSIKKIPIIIICGDKEASER-SIGIRRFGSTTTQKVSLLDA---IP 639
           D R + T  +K  E  ++ +PI +  G ++     ++ +RR G    Q +++  A   +P
Sbjct: 326 DARPQLTPGWKYNEWELRGVPIRLELGPRDLEAGTTVMVRRIGEKAKQPIAIAAAPTELP 385

Query: 640 ILTKE 644
            + +E
Sbjct: 386 GILEE 390


>gi|331087229|ref|ZP_08336299.1| prolyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA]
 gi|330408915|gb|EGG88376.1| prolyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA]
          Length = 479

 Score =  163 bits (413), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 69/416 (16%), Positives = 155/416 (37%), Gaps = 54/416 (12%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEE-INT 296
           +E+   + +  + ++ +L         ++     G+ I++ +   + R+ K+   E +  
Sbjct: 14  MEDDFAQWYTDVVKKAELIDYTSVKGCMVI-KPAGYAIWENIQHELDRRFKETGVENVYL 72

Query: 297 PQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P  + + L  ++  H + +   +  V          R   ++P +       +   ++S+
Sbjct: 73  PMFIPESLLQKEKDHVEGFAPEVAWVTHGGLEPLQER-LCVRPTSETLFCDFYAKDIQSH 131

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           R+LP    ++ SV R E   +    +R R F   +     T      E  +   +++++Y
Sbjct: 132 RDLPKVYNQWCSVVRWEK--TTRPFLRSREFLWQEG---HTAHATAEEAEERTIMMLNVY 186

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
            DF                          E ++   +   + + +++         GA  
Sbjct: 187 ADF-------------------------CEEVLAIPVIKGRKTDKEKF-------AGAEA 214

Query: 476 GPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
               E ++ D  G+  Q GT           F   Y +  ++  +   +H+  +G   R 
Sbjct: 215 TYTIESLMHD--GKALQSGTSHNFGDGFAKAFGIQYTDKENKLQY---VHQTSWGMTTRM 269

Query: 535 IGIMIENFKGN----LPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFR 587
           IG +I     N    LP  ++P+Q +V  I       ++ A E+  +LK   LS++ D  
Sbjct: 270 IGAIIMVHGDNSGLVLPPRIAPVQVMVIPIQQKKDGVLDKAYEVKEVLKKAGLSVKVDDS 329

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +++  +K  E  ++ IP+ I  G K+       + R  +     V   +    + +
Sbjct: 330 DKSPGWKFSEQEMRGIPVRIELGPKDIEAGHAVVVRRDTREKIIVPFEELETKVAE 385


>gi|74006036|ref|XP_849468.1| PREDICTED: similar to glutamyl-prolyl tRNA synthetase isoform 2
            [Canis familiaris]
          Length = 1509

 Score =  163 bits (413), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 75/436 (17%), Positives = 146/436 (33%), Gaps = 60/436 (13%)

Query: 226  NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
              +Q         EE+    + ++  + ++     D SG        + I++++  +   
Sbjct: 1005 PKKQTRLGLEAKKEENLADWYSQVITKSEMIEY-YDVSGCYILRPWAYSIWESIKDFFDA 1063

Query: 286  KIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPG 343
            +IK    E    P  + Q   + +  H   +   +  V  +  T       A++P +   
Sbjct: 1064 EIKKLGVENCYFPMFVSQGALEKEKTHVADFAPEVAWVTRSGKTEL-AEPIAVRPTSETV 1122

Query: 344  HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFN 402
                +   ++S+R+LP+RL ++ +V R E        +R R F   + H  F T E+   
Sbjct: 1123 MYPAYAKWVQSHRDLPIRLNQWCNVVRWEFK-HPQPFLRTREFLWQEGHSAFATFEEAAE 1181

Query: 403  ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
            E L+I +L   +Y++     ++    T  EK  G D                        
Sbjct: 1182 EVLQILDLYAKVYEELLAIPVVKGRKTEKEKFAGGD------------------------ 1217

Query: 463  INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
                        Y    E     A GR  Q  T        S+                 
Sbjct: 1218 ------------YTTTIE-AFISASGRAIQGATSHHLGQNFSKMFEIIFEDPKTPGEKQF 1264

Query: 523  IHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTT----------ITSSAVEYA 568
             ++  +G   R IG+M      N+ L L P    +Q +V               + +   
Sbjct: 1265 AYQNSWGLTTRTIGVMTMVHGDNMGLVLPPRVASVQVVVIPCGITNALSEEDRDALIIKC 1324

Query: 569  QEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERS-IGIRRFGS 626
             +    L S ++ ++ D R+  +  +K     +K +PI +  G ++      + +R   +
Sbjct: 1325 NDYRRRLLSVNVRVKVDLRDNYSPGWKFNHWELKGVPIRLEVGPRDMKSCQFVAVR-RDT 1383

Query: 627  TTTQKVSLLDAIPILT 642
                 V+  +A   L 
Sbjct: 1384 GEKLTVADNEAETKLK 1399


>gi|74006044|ref|XP_858992.1| PREDICTED: similar to glutamyl-prolyl tRNA synthetase isoform 5
            [Canis familiaris]
          Length = 1508

 Score =  163 bits (413), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 75/436 (17%), Positives = 146/436 (33%), Gaps = 60/436 (13%)

Query: 226  NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
              +Q         EE+    + ++  + ++     D SG        + I++++  +   
Sbjct: 1004 PKKQTRLGLEAKKEENLADWYSQVITKSEMIEY-YDVSGCYILRPWAYSIWESIKDFFDA 1062

Query: 286  KIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPG 343
            +IK    E    P  + Q   + +  H   +   +  V  +  T       A++P +   
Sbjct: 1063 EIKKLGVENCYFPMFVSQGALEKEKTHVADFAPEVAWVTRSGKTEL-AEPIAVRPTSETV 1121

Query: 344  HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFN 402
                +   ++S+R+LP+RL ++ +V R E        +R R F   + H  F T E+   
Sbjct: 1122 MYPAYAKWVQSHRDLPIRLNQWCNVVRWEFK-HPQPFLRTREFLWQEGHSAFATFEEAAE 1180

Query: 403  ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
            E L+I +L   +Y++     ++    T  EK  G D                        
Sbjct: 1181 EVLQILDLYAKVYEELLAIPVVKGRKTEKEKFAGGD------------------------ 1216

Query: 463  INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
                        Y    E     A GR  Q  T        S+                 
Sbjct: 1217 ------------YTTTIE-AFISASGRAIQGATSHHLGQNFSKMFEIIFEDPKTPGEKQF 1263

Query: 523  IHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTT----------ITSSAVEYA 568
             ++  +G   R IG+M      N+ L L P    +Q +V               + +   
Sbjct: 1264 AYQNSWGLTTRTIGVMTMVHGDNMGLVLPPRVASVQVVVIPCGITNALSEEDRDALIIKC 1323

Query: 569  QEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERS-IGIRRFGS 626
             +    L S ++ ++ D R+  +  +K     +K +PI +  G ++      + +R   +
Sbjct: 1324 NDYRRRLLSVNVRVKVDLRDNYSPGWKFNHWELKGVPIRLEVGPRDMKSCQFVAVR-RDT 1382

Query: 627  TTTQKVSLLDAIPILT 642
                 V+  +A   L 
Sbjct: 1383 GEKLTVADNEAETKLK 1398


>gi|326802012|ref|YP_004319831.1| prolyl-tRNA synthetase [Sphingobacterium sp. 21]
 gi|326552776|gb|ADZ81161.1| Prolyl-tRNA synthetase [Sphingobacterium sp. 21]
          Length = 490

 Score =  163 bits (412), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 73/434 (16%), Positives = 158/434 (36%), Gaps = 74/434 (17%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
             E   + + +L  + DL        G +     G+ I++ + + + +  KD  +     
Sbjct: 8   RNEDYSQWYNELVSKADLAE-HSAVRGCMVIKPYGYAIWEKMQAALDQMFKDTGHSNAYF 66

Query: 297 PQVLDQHLW-QQSGHWDSYRANMFAVKCA------------DDTIKDLRTFALKPMNCPG 343
           P  + +  + +++ H + +      V               D+  K      ++P +   
Sbjct: 67  PLFIPKSFFSKEASHVEGFATECAVVTHYRLKNDGNGQIIVDEEAKLEEELIVRPTSETI 126

Query: 344 HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFN 402
               +   ++SYR+LP+ + ++ +V R E        +R   F   + H    T E+   
Sbjct: 127 IWNTYKGWIQSYRDLPILVNQWANVVRWEMR--TRLFLRTAEFLWQEGHTAHATSEEAVK 184

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
           E  ++ N+  +                              AE  M   +   + +  +R
Sbjct: 185 ETERMLNVYATF-----------------------------AEEWMALPVVRGRKTENER 215

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPV 521
                    GA      E +++D  G+  Q GT   +  N    F+  + +   +  +  
Sbjct: 216 F-------AGALDTYCIEALMQD--GKALQAGTSHFLGQNFAKAFDVKFTSKEGKLDY-- 264

Query: 522 MIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVE------YAQEI 571
            +    +G   R +G +I    ++    LP  L+PIQ ++  I  +  E       A  +
Sbjct: 265 -VWATSWGVSTRLMGALIMAHSDDAGLVLPPKLAPIQVVIVPIYKTEEESRQIGALADNL 323

Query: 572 ANLLKSHHLSIETDFRN-ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
              LK   +S++ D R+ +   +K  E  +K +P+ +  G ++    ++ + R  + + +
Sbjct: 324 IAQLKQKGISVKYDDRDTQRPGFKFAEWELKGVPVRVAIGARDLQNGTVELARRDTQSKE 383

Query: 631 KVS---LLDAIPIL 641
            V    L +AI  L
Sbjct: 384 TVPQTGLAEAIEQL 397


>gi|159489080|ref|XP_001702525.1| predicted protein [Chlamydomonas reinhardtii]
 gi|158280547|gb|EDP06304.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 446

 Score =  163 bits (412), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 74/396 (18%), Positives = 149/396 (37%), Gaps = 62/396 (15%)

Query: 275 IFQTLISYMRRKIKD-DYEEINTPQ-VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           +++ +  +  ++IK    +    P  + +  L  +  H + +   +  V    ++  +  
Sbjct: 1   MWEVVQGWFDQRIKKLGVQNSYFPLFITEDVLNTEKDHVEGFAPEVAWVTKYGNSTMEK- 59

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
             A++P +       F+  ++S+R+LP+RL ++ +V R E        +R R F   + H
Sbjct: 60  PIAIRPTSETVMYPYFSQWIRSHRDLPLRLNQWTNVVRWEFKYPT-PFIRSREFLWQEGH 118

Query: 393 V-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
             F T+E+   E L I  L   +Y+D     +     ++ E+  G               
Sbjct: 119 TAFATQEEAEREVLDILELYRGVYEDLLAVPVTKGKKSKKEQFAG--------------- 163

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFY 510
                                AFY    E  + +  GR  Q  T   +  N    FN  Y
Sbjct: 164 ---------------------AFYTTTVEAYIPET-GRGIQGATSHCLGQNFSKMFNITY 201

Query: 511 VNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL----SPIQAIVTTITSSA-- 564
            +   +K H   + +  +G   R +G+MI     +  L L    +P Q ++  I  ++  
Sbjct: 202 EDDDRQKQH---VWQNSWGLTTRSLGVMIMTHADDKGLVLPPRVAPKQVVLIPIPKASTA 258

Query: 565 -------VEYAQEIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASE 616
                  ++   E+   L+   + + TD R N T  +K     +K +P+ +  G K+   
Sbjct: 259 PEAVQAMLDKVDELTKALEDKGVRVVTDTRSNYTPGWKYNHWELKGLPLRVELGPKDMDN 318

Query: 617 RSIGIRRFGSTTTQKVSLLDAIPILTK--ESLPPDC 650
            ++   R  +   + V   D    + +  E++  D 
Sbjct: 319 AAVMTCRRDTGAKEVVPWADVATRIPELLETIQADM 354


>gi|83283367|gb|ABC01299.1| prolyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum
           ATCC 27343]
          Length = 437

 Score =  163 bits (412), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 72/374 (19%), Positives = 141/374 (37%), Gaps = 54/374 (14%)

Query: 266 IFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKC 323
           + +   G++I++ +  Y+  + K  + + +  P ++ + L+ ++  H D +   +  V  
Sbjct: 1   MIFRPYGYRIWELIQKYLDEEFKKVNVDNVYFPLLIPESLFNKEKDHIDGFSPEIATVTR 60

Query: 324 ADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRV 383
                 +   F ++P +    +  F++ + SYR+LP+   ++ +V R E   +    +R 
Sbjct: 61  VGQKQLEENLF-IRPTSEVLMMDYFSNEINSYRDLPLIYNQWCNVMRWEK--TTRPFLRT 117

Query: 384 RGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWD 442
             F   + H   +   +  N CLKI N+     K+     ++    T  EK  G      
Sbjct: 118 SEFLWQEGHTVHSSYNEAENFCLKILNIYEKFAKEILLLPVICGKKTEKEKFAG------ 171

Query: 443 DAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNL 502
                                         A      E ++ D  G+  QCGT     + 
Sbjct: 172 ------------------------------AKDTYTIESLMFD--GQALQCGTSHFFADN 199

Query: 503 PSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL----SPIQAIVT 558
            ++   + +   +++      +   +G   R IG +I     +  L L    SPIQ  + 
Sbjct: 200 FTK--VYDIKFQNKENKLEHAYSTSWGVSTRLIGALIMTHSDDNGLVLPSKISPIQVQII 257

Query: 559 TI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASE 616
            I  T    +  + I + L      I+ D  +++  +KI E  IK IPI I  G ++   
Sbjct: 258 QIKNTEQIDQVVEIIKDKLSD--YRIDVDNSDKSFGFKISEAEIKGIPIRIEIGPRDLEN 315

Query: 617 RSIGIRRFGSTTTQ 630
             I I R      +
Sbjct: 316 NQITISRRDQQENK 329


>gi|71004672|ref|XP_757002.1| hypothetical protein UM00855.1 [Ustilago maydis 521]
 gi|46096696|gb|EAK81929.1| hypothetical protein UM00855.1 [Ustilago maydis 521]
          Length = 734

 Score =  163 bits (412), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 64/418 (15%), Positives = 147/418 (35%), Gaps = 65/418 (15%)

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
              + ++ R+ D+     D SG        + ++Q++ ++   +IK    E    P  + 
Sbjct: 235 PEWYTQVLRKGDMLDY-YDVSGCYILKPWSYFVWQSIQNFFDAEIKKIGVENCYFPMFVS 293

Query: 302 QHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
             + + +  H + +   +  V  A  +  + R  A++P +       +   ++S+R+LP+
Sbjct: 294 ADVLEREKDHIEGFAPEVAWVTKAGSSDLE-RPVAIRPTSETVMYPYYAKWIQSHRDLPL 352

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFG 419
           +L ++ SV R E        +R R F   + H    + E+   E + I +L   +Y+   
Sbjct: 353 KLNQWNSVVRWEFK-HPQPFLRTREFLWQEGHTAHISLEEADKEVMHILDLYRQVYEKL- 410

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
                                              +       + +      G +Y    
Sbjct: 411 -----------------------------------LAVPVVPGVKSEKEKFAGGYYTTTV 435

Query: 480 EYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSH------SEKCHPVMIHRAVFGSIE 532
           E  +    GR  Q GT   +  N    F     +         +    + + +  +G   
Sbjct: 436 EGFVPTT-GRGIQGGTSHCLGQNFSKMFGIMVEDPKAPEEFRGKDEGKLHVWQNSWGLST 494

Query: 533 RFIGIMIENFKGNLPLWLSP----IQAIVTTIT----------SSAVEYAQEIANLLKSH 578
           R IG+M+     +  L + P    +Q I+               + ++   + A  L++ 
Sbjct: 495 RTIGVMVMVHGDDDGLVMPPRVAQVQVIIIPCGIGVKTSAQEKQNIMDACDQTAKDLQAA 554

Query: 579 HLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
            +  + D R+  +  +K  +  ++ +P+ +  G K+  ++S+   R  +      S+ 
Sbjct: 555 GIRAKADLRDNYSPGFKFNDWELRGVPVRLEIGPKDLEKKSVVAVRRDNKAKTSFSVD 612


>gi|229829763|ref|ZP_04455832.1| hypothetical protein GCWU000342_01860 [Shuttleworthia satelles DSM
           14600]
 gi|229791752|gb|EEP27866.1| hypothetical protein GCWU000342_01860 [Shuttleworthia satelles DSM
           14600]
          Length = 479

 Score =  163 bits (412), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 67/426 (15%), Positives = 160/426 (37%), Gaps = 54/426 (12%)

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR 284
               ++  + +    E   + +  + ++ +L   +    G + +   G+ I++ +   M 
Sbjct: 1   MAKDKKFVEEITPRSEDFAQWYTDVVKKAELMQYS-SLKGFMIYKPLGYAIWENIQKNMD 59

Query: 285 RKIKDDYEE-INTPQVLDQHL-WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
              K+   E +  P ++ + L  +++ H + +   +  V          R  A++P +  
Sbjct: 60  AMFKETGVENVYMPLLMPESLLKKEAEHVEGFAPEVAWVTQGGIQPLQER-LAIRPTSET 118

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA-HVFCTKEQMF 401
               +++  ++SYR+LP    ++ SV R E   +    +R   F   +      T E+  
Sbjct: 119 LFCDLYSTIVQSYRDLPKVYNQWCSVVRWEK--TTRPFLRSSEFLWQEGHTAHATAEEAE 176

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
              +++ N+     + +    ++    T  EK  G++A +                    
Sbjct: 177 ARTIQMLNVYADFCEKYLAIPVIKGRKTDKEKFAGAEATY-------------------- 216

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
                             E ++ D  G+  Q GT     +  +R  A+ +    +     
Sbjct: 217 ----------------TIETLMHD--GKALQSGTSHNFGDGFAR--AYGIQYTDKNNQLR 256

Query: 522 MIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIANL 574
            +H+  +G   R IG +I    ++    LP  ++P+Q ++  +       +E A+E+   
Sbjct: 257 YVHQTSWGVSTRLIGAIIMVHGDDSGLVLPPRIAPVQIVIVPVMQQKEGVLEKAEELRQQ 316

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           L+    S++ D   ++  +K  E  ++ IP+ I  G K+  +  + + R  +     V +
Sbjct: 317 LQKAGFSVKLDDSEKSPGWKFAEAEMRGIPLRIEVGPKDIEKEQVVMVRRDNRKKVFVPM 376

Query: 635 LDAIPI 640
            +    
Sbjct: 377 RELTER 382


>gi|4455680|emb|CAB36573.1| putative prolyl tRNA synthetase [Mycobacterium leprae]
          Length = 473

 Score =  163 bits (412), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 74/427 (17%), Positives = 154/427 (36%), Gaps = 61/427 (14%)

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEE 293
           +   E+     + ++  +  L         ++     G++I++ L   +  KIK+  +E 
Sbjct: 1   MTRQEDDFSAWYNEVVAKAGLIDRGPAKGTMVI-RPYGYRIWELLQDELDSKIKELGHEN 59

Query: 294 INTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
              P ++ ++ + +++ H + +   +  V  A           ++P +      +    +
Sbjct: 60  AYFPMLIPENYFNREAEHVEGFHPELAVVTHAGGKEL-SEPLVIRPTSETVIGDMMAKWI 118

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
            S+R+LP+RL ++ +V R E    +  L+R   F   + H         ++ L+     +
Sbjct: 119 TSHRDLPLRLNQWSNVVRWELRPRM--LLRTIEFLWQEGHS---AHIEKSDALRETLFAL 173

Query: 413 SIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
            IY                                     D           T      G
Sbjct: 174 DIYTTL--------------------------------ARDMAAIPIVSGEKTAGERFAG 201

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
           A      E +++D  G+  Q  T      N    FN  Y  +  ++     +H   FG  
Sbjct: 202 ALNTYTIEAMMRD--GKALQSATTHYLGDNFARAFNIRYTTAEEQQ---AFVHTTSFGLS 256

Query: 532 ERFIGIMIENFKGNLPLWL----SPIQAIVTTIT-----SSAVEYAQEIANLLKSHHLSI 582
            R IG ++     +  L L    +P Q ++  IT     S     A ++A  L++  +  
Sbjct: 257 TRMIGAIVMVHGDDKGLVLPPQVAPYQVVIVPITTGNKASEVGHAAADLARRLQAAGVRT 316

Query: 583 ETDFRNE-TINYKIREHSIKKIPIIIICGDKEASER-SIGIRRFGSTTTQKVSLLDA--- 637
             D R + T  +K  E  ++ +PI +  G ++     ++ +RR G    Q +++  A   
Sbjct: 317 HVDARPQLTPGWKYNEWELRGVPIRLELGPRDLEAGTTVMVRRIGEKAKQPIAIAAAPTE 376

Query: 638 IPILTKE 644
           +P + +E
Sbjct: 377 LPGILEE 383


>gi|167044004|gb|ABZ08690.1| putative anticodon binding domain protein [uncultured marine
           crenarchaeote HF4000_APKG3K8]
          Length = 479

 Score =  163 bits (412), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 78/418 (18%), Positives = 161/418 (38%), Gaps = 59/418 (14%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQ 298
            ++    + ++  + +L   A     ++     G+ I++++   + +K+K+         
Sbjct: 12  NDNFSEWYTQVVIKTELVDYAPVKGLIVL-RPDGYSIWESIKESLDKKLKETGHRNGFLP 70

Query: 299 VLDQHLW--QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           VL       ++  H++     +F V  + ++    R  AL+P +     ++F+  +KS+R
Sbjct: 71  VLIPESLLAKEKEHFEGLNPEVFWVTQSGNSEIGDR-LALRPTSETLAYSLFSKWIKSWR 129

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIY 415
           +LP+++  + S  R E  G     +R   F   + H    TK++   E   I  L     
Sbjct: 130 DLPLKMNFWNSALRAEIKG-TKPFLRTSEFLWQEGHTVHATKDEAEKEVADILELYKKTI 188

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                                        E  +   + T K S +D+         GA Y
Sbjct: 189 -----------------------------EEELAVPVITGKKSEKDKF-------VGAVY 212

Query: 476 GPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
               E ++ D  G+  Q GT   +  N    F+  Y++ ++ +       +  +G   R 
Sbjct: 213 TDTLESLMPD--GKALQMGTSHFLGQNFSKPFDVKYLDENNVE---AFAWQTSWGVSWRL 267

Query: 535 IGIMIENFKGNLPLWL----SPIQAIVTTIT------SSAVEYAQEIANLLKSHHLSIET 584
           IG MI     +  L L    +PIQ ++  I        + ++ A +I + L ++ + +  
Sbjct: 268 IGGMIMTHGDDKGLVLPPKVAPIQVVIIPIYYSNDEKENVLQTACQIKDSLSNNDIRVHL 327

Query: 585 DFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           D R   T  +K  +  +K IPI I  G K+ ++  + + R  + T   + +      +
Sbjct: 328 DDREHLTPGFKFNDWEMKGIPIRIEIGPKDIAKNQVVLVRRHNQTKISIGIDALTEKI 385


>gi|317502695|ref|ZP_07960807.1| proline--tRNA ligase [Prevotella salivae DSM 15606]
 gi|315666181|gb|EFV05736.1| proline--tRNA ligase [Prevotella salivae DSM 15606]
          Length = 493

 Score =  163 bits (412), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 70/444 (15%), Positives = 158/444 (35%), Gaps = 74/444 (16%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
              E+  + +  L  + DL   +     ++     G+ I++ + + + ++ K    +   
Sbjct: 10  KRAENYSQWYNDLVVKTDLAEQSPVRGCMVI-KPYGYAIWEKMQAELDKEFKKTGVQNAY 68

Query: 296 TPQVLDQHLW-QQSGHWDSYRANMFAVKCA-------------DDTIKDLRTFALKPMNC 341
            P ++ +    +++ H   +      V                D   K      ++P + 
Sbjct: 69  FPMLIPKSFLSKEAEHVKGFAKECAVVTHYRLKASEDGNSVVVDPAAKLDEELIIRPTSE 128

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQM 400
                 +   + S+R+LP+   ++ +V R E        +R   F   + H    TKE+ 
Sbjct: 129 TIIWNTYRGWIHSWRDLPIMCNQWCNVMRWEMR--TRPFLRTSEFLWQEGHTAHATKEEA 186

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQ 460
             E   +      +Y DF                      W             +     
Sbjct: 187 EQEAQTML----KVYADFA-------------------EKW-------------MAVPVL 210

Query: 461 DRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCH 519
             + +      GA      E +++D  G+  Q GT   +  N    F+  ++N  ++   
Sbjct: 211 QGVKSETERFAGALDTYTIEAMMQD--GKALQSGTSHFLGQNFAKSFDVQFLNKENK--- 265

Query: 520 PVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITS------SAVEYAQ 569
           P  +    +G   R +G +I    ++    LP  L+PIQ ++  I        +  +  Q
Sbjct: 266 PDYVWATSWGVSTRLMGALIMVHSDDNGLVLPPKLAPIQVVIVPIYKGDEQRKAISDKLQ 325

Query: 570 EIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
            +   ++   +S++ D   N+   +K  ++ +K +P+ ++ G ++    +I I R  +  
Sbjct: 326 PVITKMQELGISVKFDDSDNKRPGFKFADYELKGVPVRLVMGGRDLENNTIEIMRRDTLE 385

Query: 629 TQKVSLLDAIPILTKESLPPDCQK 652
            + VS    +  +  ++L  D Q+
Sbjct: 386 KENVSFDGIVERV--QTLLDDIQR 407


>gi|315652419|ref|ZP_07905407.1| proline--tRNA ligase [Eubacterium saburreum DSM 3986]
 gi|315485318|gb|EFU75712.1| proline--tRNA ligase [Eubacterium saburreum DSM 3986]
          Length = 479

 Score =  163 bits (412), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 72/424 (16%), Positives = 154/424 (36%), Gaps = 56/424 (13%)

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR 284
              +++L + +  ++    R +  +  + +L        G +     G+ I++ + + + 
Sbjct: 1   MAKEKKLVEEITSMDTDFARWYTDIVLKAELVDY-TSVKGCLVIRPAGYAIWENMKNEID 59

Query: 285 RKIKDDYEEINTPQVLDQHLW--QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
           R+ K+   E     +        +++ H + +   +  V        D R   ++P +  
Sbjct: 60  RRFKETGIENCYLPMFIPESLLQKEADHVEGFAPEVAWVTYGGMEKLDER-LCVRPTSET 118

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMF 401
                +   +KSYR+LP  L ++ SV R E   +    +R R F   + H    T ++  
Sbjct: 119 LFCDYYAGAVKSYRDLPQLLNQWCSVVRWEK--TTRPFLRSREFLWQEGHTVHATAKEAH 176

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
           +  +++ ++    ++                         D A  ++KGV    +  +  
Sbjct: 177 DRTVQMLDVYADFFEK------------------------DLAIPVIKGVKTEKEKFA-- 210

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHP 520
                     GA      E ++ D  G+  Q GT           FN  + +  ++    
Sbjct: 211 ----------GAEATYTIEALMHD--GKALQSGTSHYFGDGFAKAFNVTFTDKDNQVK-- 256

Query: 521 VMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIAN 573
             +    FG   R IG +I    +N    LP  ++P+Q  +  +       ++ A  + +
Sbjct: 257 -PVFETSFGMTTRIIGAVIMVHGDNSGLKLPPHIAPVQVNIIPVAAHKEGVLDAANTLYD 315

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            LK   L ++ D   ++  +K  E  ++ IP+ I  G K+         R  +     VS
Sbjct: 316 RLKVAGLRVKLDNSEKSPGFKFAESEMRGIPLRIEIGPKDIENNQCVFVRRDTGEKSFVS 375

Query: 634 LLDA 637
           L + 
Sbjct: 376 LDNV 379


>gi|163755863|ref|ZP_02162980.1| prolyl-tRNA synthetase [Kordia algicida OT-1]
 gi|161324034|gb|EDP95366.1| prolyl-tRNA synthetase [Kordia algicida OT-1]
          Length = 492

 Score =  163 bits (412), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 81/451 (17%), Positives = 167/451 (37%), Gaps = 75/451 (16%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
           +++ L    E   + + +L  + DL   +     ++     G+ I++ + + + +  K+ 
Sbjct: 1   MSKKLTKRTEDYSKWYNELVVKADLAENSAVRGCMVI-KPYGYAIWEKMQAQLDKMFKET 59

Query: 290 DYEEINTPQVLDQHLWQ-----------QSGHWDSYRANMFAVKCA----DDTIKDLRTF 334
            +E    P  + + L++           +      YR      K      D   K     
Sbjct: 60  GHENAYFPLFVPKSLFEAEEKNAEGFAKECAVVTHYRLKTDPDKEGKLMVDPNAKLEEEL 119

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV- 393
            ++P +       + + ++SYR+LP+ + ++ +V R E        +R   F   + H  
Sbjct: 120 IVRPTSEAIIWNTYKNWIQSYRDLPILINQWANVVRWEMR--TRLFLRTAEFLWQEGHTA 177

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
             TK++   E L++  +     +DF    ++    T  E+  G                 
Sbjct: 178 HATKDEAVAESLQMQKVYAEFAEDFMAMPVVKGAKTESERFAG----------------- 220

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVN 512
                              A      E +++D  G+  Q GT   +  N    F+  Y  
Sbjct: 221 -------------------ALDTYTIEALMQD--GKALQAGTSHFLGQNFAEAFDVKYAT 259

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVEY- 567
              ++    ++    +G   R +G +I    ++    LP  L+PIQ +   I  +  ++ 
Sbjct: 260 KEGKQE---LVWATSWGVSTRLMGGLIMTHSDDAGLVLPPKLAPIQVVFVPIYKNEEQFE 316

Query: 568 -----AQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGI 621
                  EI+N LK+  +SI+ D R+      K  E  +K +P+ I  G ++    ++ I
Sbjct: 317 AIAKKVTEISNELKAKGVSIKFDKRDTLRPGAKFAEWELKGVPLRIALGARDLENGTLEI 376

Query: 622 RRFGSTTTQKVSLLDAIPILTK--ESLPPDC 650
            R  +   Q V+  DA+  +    E++  D 
Sbjct: 377 ARRDTFEKQSVAQEDAVATVVSLLETIQEDL 407


>gi|15806285|ref|NP_294990.1| prolyl-tRNA synthetase [Deinococcus radiodurans R1]
 gi|81858880|sp|Q9RUW4|SYP_DEIRA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|6459012|gb|AAF10837.1|AE001974_2 prolyl-tRNA synthetase [Deinococcus radiodurans R1]
          Length = 499

 Score =  163 bits (412), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 68/425 (16%), Positives = 157/425 (36%), Gaps = 55/425 (12%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
            ++     +          + ++ ++ DL   +     ++     G  +++ +  ++  +
Sbjct: 14  DKKAQQYGVTPQSVDFNDWYNEVVKKADLADNSPVAGAMVV-RPYGSALWENIQRWLDDR 72

Query: 287 IKD-DYEEINTPQVLDQHL-WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
            K   +E +  P ++  +   +++ H + +   +F V     T +    + ++P +    
Sbjct: 73  FKASGHESLIFPTLIPMNFIMKEADHVEGFAPELFTV-NKIGTEELAEPYVMRPTSETII 131

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +++  L SYR+LP    ++GSV+R E        +R   F   + H     E      
Sbjct: 132 GHMWSGWLNSYRDLPFLHYQWGSVFRAELR--TKAFLRTSEFFWHEGHTAHADEAEA--- 186

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
                                    R E R   D   +   +++   +   + ++ +R  
Sbjct: 187 -------------------------RAEVRQQLDLYHEFCRDVLALPVVRGEKTASERF- 220

Query: 465 TGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIH 524
                  GA      E +++D  G+  Q GT        SR  AF V   + +      H
Sbjct: 221 ------AGAVATYSIEGMMRD--GKALQSGTSHYLGQNFSR--AFDVKYQTREQKEEFAH 270

Query: 525 RAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTIT-----SSAVEYAQEIANLL 575
              +    R IG +I     +    +P  ++PIQ +V  +         V+  +++A  L
Sbjct: 271 TTSWAISSRIIGAIIMTHGDDSGLMMPPRIAPIQVVVIPVGRKDNFDQMVQEGEKLAAEL 330

Query: 576 KSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           ++  L ++ D R+  T  +K  +  +K +P+ I  G ++     + ++   S   + +  
Sbjct: 331 RAQGLRVKVDGRDGVTNGFKYNDWELKGVPVRIELGPRDLESGVLVVKNRHSEDKETLPR 390

Query: 635 LDAIP 639
            +A+ 
Sbjct: 391 AEAVS 395


>gi|325663708|ref|ZP_08152112.1| prolyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA]
 gi|325470201|gb|EGC73434.1| prolyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA]
          Length = 492

 Score =  163 bits (412), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 70/430 (16%), Positives = 161/430 (37%), Gaps = 54/430 (12%)

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYM 283
           +    ++L + +  +E+   + +  + ++ +L         ++     G+ I++ +   +
Sbjct: 13  SMAKDKKLVEAITSMEDDFAQWYTDVVKKAELIDYTSVKGCMVI-KPAGYAIWENIQHEL 71

Query: 284 RRKIKDDYEE-INTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
            R+ K+   E +  P  + + L  ++  H + +   +  V          R   ++P + 
Sbjct: 72  DRRFKETGVENVYLPMFIPESLLQKEKDHVEGFAPEVAWVTHGGLEPLQER-LCVRPTSE 130

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
                 +   ++S+R+LP    ++ SV R E   +    +R R F   +     T     
Sbjct: 131 TLFCDFYAKDIQSHRDLPKVYNQWCSVVRWEK--TTRPFLRSREFLWQEG---HTAHATA 185

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E  +   +++++Y DF                          E ++   +   + + ++
Sbjct: 186 EEAEERTIMMLNVYADF-------------------------CEEVLAIPVIKGRKTDKE 220

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHP 520
           +         GA      E ++ D  G+  Q GT           F   Y +  ++  + 
Sbjct: 221 KF-------AGAEATYTIESLMHD--GKALQSGTSHNFGDGFAKAFGIQYTDKENKLQY- 270

Query: 521 VMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTI---TSSAVEYAQEIAN 573
             +H+  +G   R IG +I     N    LP  ++P+Q +V  I       ++ A E+  
Sbjct: 271 --VHQTSWGMTTRMIGAIIMVHGDNSGLVLPPRIAPVQVMVIPIQQKKDGVLDKAYEVKE 328

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
           +LK   LS++ D  +++  +K  E  ++ IP+ I  G K+       + R  +     V 
Sbjct: 329 VLKKAGLSVKVDDSDKSPGWKFSEQEMRGIPVRIELGPKDIEAGHAVVVRRDTREKIIVP 388

Query: 634 LLDAIPILTK 643
             +    + +
Sbjct: 389 FEELETKVAE 398


>gi|226355442|ref|YP_002785182.1| prolyl-tRNA synthetase [Deinococcus deserti VCD115]
 gi|226317432|gb|ACO45428.1| putative Proline--tRNA ligase (prolyl-tRNA synthetase) [Deinococcus
           deserti VCD115]
          Length = 499

 Score =  163 bits (412), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 69/418 (16%), Positives = 158/418 (37%), Gaps = 57/418 (13%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEE-INT 296
                   + ++ ++ DL   +     ++     G  +++ ++ ++  + K    E +  
Sbjct: 25  QSVDFNDWYNEVVKKADLADNSPVAGAMVV-RPYGSALWENIVRWLDDRFKATGHESLVF 83

Query: 297 PQVLDQHL-WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P ++      +++ H + +   +F V     T +    + ++P +      +++  L SY
Sbjct: 84  PTLIPMGFIMKEADHVEGFAPELFTV-SKIGTEELAEPYVMRPTSETIIGHMWSGWLNSY 142

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN-ECLKIHNLIISI 414
           R+LP    ++GSV+R E        +R   F   + H     E     E  ++ ++    
Sbjct: 143 RDLPFLHYQWGSVFRAELR--TKAFLRTSEFFWHEGHTAHADEPEARGEVRQMLDIYHEF 200

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            +D     ++    T  E+  G+ A +                                 
Sbjct: 201 CRDVLALPVVRGEKTASERFAGAVATYS-------------------------------- 228

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
                E +++D  G+  Q GT        SR  AF V   + +      H   +    R 
Sbjct: 229 ----IEGMMRD--GKALQSGTSHYLGQNFSR--AFDVKFQTREQKEEYAHTTSWAISSRI 280

Query: 535 IGIMIENFKGN----LPLWLSPIQAIVTTIT-----SSAVEYAQEIANLLKSHHLSIETD 585
           IG +I     +    +P  ++PIQ +V  +       + V+ A+++A  L++  L ++ D
Sbjct: 281 IGAIIMTHGDDFGLIMPPRIAPIQVVVIPVGRKDNFDAMVQEAEQLAGELRALGLRVKVD 340

Query: 586 FRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            R+  T  +K  +  +K +P+ I  G ++  +  + ++   S   + +   +A+  +T
Sbjct: 341 KRDGVTNGFKYNDWELKGVPVRIELGPRDLEQGVVVVKGRNSEEKETLERAEAVSGMT 398


>gi|160895412|ref|ZP_02076181.1| hypothetical protein CLOL250_02969 [Clostridium sp. L2-50]
 gi|156862914|gb|EDO56345.1| hypothetical protein CLOL250_02969 [Clostridium sp. L2-50]
          Length = 478

 Score =  163 bits (412), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 74/439 (16%), Positives = 163/439 (37%), Gaps = 59/439 (13%)

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR 284
              +++L + +  ++E   + +  + ++ +L        G +     G+ I++ +   + 
Sbjct: 1   MANEKKLVEAITSMDEDFAQWYTDVVKKAEL-TDYSSVRGCMILRPAGYAIWENIQKELD 59

Query: 285 RKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
           R+ K+   E +  P  + + L  ++  H + +   +  V          R   ++P +  
Sbjct: 60  RRFKEIGVENVYMPLFIPESLLQKEKDHVEGFAPEVAWVTQGGLDPLPER-LCVRPTSET 118

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA-HVFCTKEQMF 401
               ++++ + SYR+LP    ++ SV R E   +    +R   F   +      T E+  
Sbjct: 119 LFCDLYSNIIHSYRDLPKVYNQWCSVVRWEK--TTRPFLRSMEFLWQEGHTAHATAEEAE 176

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
              +++ N+     +      ++    T  EK  G++A +                    
Sbjct: 177 ERTIQMLNVYADFCEQVLAIPMIKGRKTDKEKFAGAEATY-------------------- 216

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHP 520
                             E ++ D  G+  Q GT           F   Y +++++  + 
Sbjct: 217 ----------------TIEALMHD--GKALQSGTSHNFGDGFAKAFGVQYTDANNKLQY- 257

Query: 521 VMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTIT---SSAVEYAQEIAN 573
             +H+  +G   R IG +I    ++    LP  ++P Q ++  I       +E AQE+  
Sbjct: 258 --VHQTSWGMSTRIIGAIIMVHGDDSGLVLPPRIAPTQVMIIPINQKKEGVLEKAQEVKA 315

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            L     +++ D  N+   +K  E  ++ IP+ I  G K+       I R  +     VS
Sbjct: 316 ALSEK-FTVKLDDSNKNPGWKFSEQEMRGIPVRIEIGPKDIEAGQAVIVRRDNREKTVVS 374

Query: 634 LLDAIPILTK--ESLPPDC 650
           L +    + +  E +  D 
Sbjct: 375 LDNITEAVGEILEKMQADM 393


>gi|325269446|ref|ZP_08136063.1| proline--tRNA ligase [Prevotella multiformis DSM 16608]
 gi|324988367|gb|EGC20333.1| proline--tRNA ligase [Prevotella multiformis DSM 16608]
          Length = 493

 Score =  163 bits (412), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 70/437 (16%), Positives = 155/437 (35%), Gaps = 70/437 (16%)

Query: 233 QYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DY 291
           +++    E+  + +  L  + +L   +     ++     G+ I++ + + + R  K+   
Sbjct: 6   KHMTKRAENYSQWYNDLVVKAELAEQSAVRGCMVI-KPYGYAIWEKMQAQLDRMFKETGV 64

Query: 292 EEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCA-------------DDTIKDLRTFALK 337
           +    P ++ +    +++ H   +      V                D   K      ++
Sbjct: 65  QNAYFPLLIPKSFLSREAEHVKGFAKECAVVTHYRLKATEDGNGVEVDPNAKLEEELIIR 124

Query: 338 PMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK 397
           P +       + + + S+R+LP+   ++ +V R E        +R   F   + H   T 
Sbjct: 125 PTSETIIWNTYKNWIHSWRDLPLMCNQWCNVMRWEMR--TRPFLRTSEFLWQEGH---TA 179

Query: 398 EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKN 457
                E  K    ++ +Y DF                         AE  +         
Sbjct: 180 HATREEAEKEAQTMLRVYADF-------------------------AEKWLA-------V 207

Query: 458 SSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSE 516
                + +      GA      E +++D  G+  Q GT   +  N    F+  Y+N  ++
Sbjct: 208 PVVQGVKSETERFAGALDTYTIEAMMQD--GKALQSGTSHFLGQNFAKSFDVTYLNKDNK 265

Query: 517 KCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITS------SAVE 566
              P  +    +G   R IG +I    ++    LP  ++PIQ  V  I           E
Sbjct: 266 ---PEYVWATSWGVSTRLIGALIMTHSDDNGLVLPPRIAPIQVAVIPIFKGEEQLKELSE 322

Query: 567 YAQEIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
             Q + + L+S  ++++ D   N+   +K  ++ +K +P+ +  G ++    +I + R  
Sbjct: 323 KLQPVIDDLRSLGITVKYDDSDNKRPGFKFADYELKGVPVRLAMGGRDLENNTIEVMRRD 382

Query: 626 STTTQKVSLLDAIPILT 642
           +   + VS    +  + 
Sbjct: 383 TLEKESVSFDGIVGRVK 399


>gi|268317819|ref|YP_003291538.1| prolyl-tRNA synthetase [Rhodothermus marinus DSM 4252]
 gi|262335353|gb|ACY49150.1| prolyl-tRNA synthetase [Rhodothermus marinus DSM 4252]
          Length = 496

 Score =  163 bits (412), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 69/426 (16%), Positives = 155/426 (36%), Gaps = 71/426 (16%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           + +  + R   L   +     +I     G+ +++ + + + R  K+  +E    P  + Q
Sbjct: 14  QWYVDVVRAAKLADYSPVRGCMII-LPNGYALWENMRAVLDRMFKETGHENAYFPLFIPQ 72

Query: 303 HLW-QQSGHWDSYRANMFAVKC------------ADDTIKDLRTFALKPMNCPGHVAVFN 349
               +++ H + +      V               D   K      ++P +       F+
Sbjct: 73  SFLAKEAEHVEGFAKECAVVTHSRLKIDEKGQLIPDPESKLEENLIVRPTSETIIWDAFS 132

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIH 408
             ++S+R+LP+ + ++ +V R E        +R   F   + H    T+E+   E L+I 
Sbjct: 133 RWIQSWRDLPILINQWANVVRWEMR--TRLFLRTMEFLWQEGHTAHATREEAIEEALRIL 190

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
           ++  +  +++    ++  + T  E+  G                                
Sbjct: 191 DIYTTFAEEYMAMPVIQGVKTPSERFAG-------------------------------- 218

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAV 527
               A      E +++D  GR  Q GT   +  N    F+  + N ++E  +   +    
Sbjct: 219 ----AVDTYCIEALMQD--GRALQAGTSHFLGQNFAKAFDCKFQNQNNELEY---VWATS 269

Query: 528 FGSIERFIGIMIENFKGNL----PLWLSPIQAIVTTIT------SSAVEYAQEIANLLKS 577
           +G   R IG ++     +     P  L+P Q ++  I       S+ +E A  I   LK 
Sbjct: 270 WGVSTRLIGALVMTHSDDQGLVLPPRLAPTQVVIIPIFRNDVEKSAVLEQAGRIERELKD 329

Query: 578 HHLSIETDFRN-ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
              +++ D R      +K  E+ ++ +P+ +  G ++  + ++ + R  + T + V    
Sbjct: 330 AGFTVKLDARETHRPGWKFNEYEVQGVPVRVAIGPRDVEQGTVELARRDTRTKETVPQEG 389

Query: 637 AIPILT 642
               + 
Sbjct: 390 LAERVR 395


>gi|224539709|ref|ZP_03680248.1| hypothetical protein BACCELL_04618 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224518677|gb|EEF87782.1| hypothetical protein BACCELL_04618 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 520

 Score =  163 bits (412), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 67/438 (15%), Positives = 155/438 (35%), Gaps = 73/438 (16%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
              E+  + + +L  + DL   +     ++     G+ I++ +   +    K+  +    
Sbjct: 33  KRSENYSQWYNELVVKADLAEQSAVRGCMVI-KPYGYAIWEKIQRQLDDMFKETGHVNAY 91

Query: 296 TPQVLDQHLW-QQSGHWDSYRANMFAVKCA-------------DDTIKDLRTFALKPMNC 341
            P ++ +    +++ H + +      V                D   K      ++P + 
Sbjct: 92  FPLLIPKSFLSREAEHVEGFAKECAVVTHHRLKNAPDGSGVIVDPEAKLEEELIIRPTSE 151

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
                 + + + SYR+LP+   ++ +V R E        +R   F   + H   T     
Sbjct: 152 TIIWNTYKNWINSYRDLPILCNQWANVMRWEMR--TRLFLRTAEFLWQEGH---TAHATR 206

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E  +    ++++Y +F                                    +      
Sbjct: 207 EEAEEEAVRMLNVYAEF--------------------------------AEKYMAVPVVK 234

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHP 520
            + +      GA      E +++D  G+  Q GT   +  N    F+  +VN  ++  + 
Sbjct: 235 GVKSANERFAGALDTYTIEAMMQD--GKALQSGTSHFLGQNFAKAFDVQFVNKENKMEY- 291

Query: 521 VMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTIT------SSAVEYAQE 570
             +    +G   R +G +I    ++    LP  L+PIQ ++  I           E    
Sbjct: 292 --VWATSWGVSTRLMGALIMTHSDDNGLVLPPHLAPIQVVIVPIYKNAEMLQKINEKVAG 349

Query: 571 IANLLKSHHLSIETDF-RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           I   LKS  +S++ D   N+   +K  ++ +K +P+ ++ G ++    ++ + R  +   
Sbjct: 350 IVAKLKSMGISVKYDNADNKRPGFKFADYELKGVPVRLVMGGRDLENNTMEVMRRDTLEK 409

Query: 630 QKVS---LLDAIPILTKE 644
           + +S   + + +  L +E
Sbjct: 410 ETLSCDGIEEYVKNLLEE 427


>gi|222833149|gb|EEE71626.1| predicted protein [Populus trichocarpa]
          Length = 152

 Score =  163 bits (411), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 61/147 (41%), Positives = 93/147 (63%), Gaps = 4/147 (2%)

Query: 502 LPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT 561
           +P R +A YV    ++  PVM+HRA+ GS+ERFIGI+IE   G +P WL+P+QA V  IT
Sbjct: 1   MPERLDAEYVGEDGDRHRPVMLHRAIVGSLERFIGILIEQHAGAMPTWLAPVQAAVLNIT 60

Query: 562 SSAVEYAQEIANLLKSH----HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASER 617
            +  +Y +E+A  L+       L + TD RNE I YKIREHS++K+P I++ GDKE +  
Sbjct: 61  DAQADYVREVAQKLQKAFPNQGLRVATDLRNEKITYKIREHSLQKLPYILVAGDKEKAAG 120

Query: 618 SIGIRRFGSTTTQKVSLLDAIPILTKE 644
           ++ +R  G+     +S+   I ++ K+
Sbjct: 121 AVAVRARGNKDLGVMSVDAFIELVAKD 147


>gi|290996111|ref|XP_002680626.1| prolyl-tRNA synthetase [Naegleria gruberi]
 gi|284094247|gb|EFC47882.1| prolyl-tRNA synthetase [Naegleria gruberi]
          Length = 575

 Score =  163 bits (411), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 76/442 (17%), Positives = 156/442 (35%), Gaps = 56/442 (12%)

Query: 219 RIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQT 278
           +  G++    ++         E+    + ++  + D F    + SG   +    + +++ 
Sbjct: 35  QQQGSSAAGNKQNEGVDVKKAENFSEWYTQVITKSD-FLDYYEVSGCYIFRPNCFYVWEK 93

Query: 279 LISYMRRKIKD-DYEEINTPQ-VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFAL 336
           + ++    IK    + +  P  V  + L  +  H + +   +  V  + ++  D    AL
Sbjct: 94  VQNFFDGHIKKLGVQNVMFPMFVTKRALETEKDHVEGFSPEVAWVTKSGNSDLD-EPIAL 152

Query: 337 KPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FC 395
           +P +       +   +KS+R+LP++L ++ +V R E   ++   +R R F   + H  F 
Sbjct: 153 RPTSETIMYPSYAKWIKSHRDLPLKLNQWTNVVRWEFKHAV-PFIRSREFYWQEGHSAFK 211

Query: 396 TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTI 455
             EQ   E   I  L    Y++     ++    T             +AE          
Sbjct: 212 NFEQAKTEVYDILELYKRTYEEILAVPVIKGKKT-------------EAEKF-------- 250

Query: 456 KNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS 515
                           GA +    E  +    GR  Q  T        SR   F +   +
Sbjct: 251 ---------------AGADFTTTIEAFIPT-NGRAVQAATSHHLGQNFSRM--FKIEFEA 292

Query: 516 EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTTITSSAVE----- 566
           E     ++++  +G   R +G+MI     +  + L P     Q ++  +     +     
Sbjct: 293 EDKKSKLVYQNSWGLSTRSLGVMIMVHGDDKGMVLPPRVAFTQVVLIPLYFKNKDNSELE 352

Query: 567 -YAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRF 624
             ++ I   L+ + + I+ D R E T  +K     ++ +P+ I  G K+       + R 
Sbjct: 353 TKSKTIFAQLEENGVRIKLDDRLEKTPGWKYNYWELRGVPLRIEIGPKDLENGVAMLCRR 412

Query: 625 GSTTTQKVSLLDAIPILTKESL 646
            +     V L         E L
Sbjct: 413 DNGEKWSVPLEQLTAQYVNEIL 434


>gi|324500217|gb|ADY40110.1| Bifunctional aminoacyl-tRNA synthetase [Ascaris suum]
          Length = 1924

 Score =  163 bits (411), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 82/434 (18%), Positives = 151/434 (34%), Gaps = 62/434 (14%)

Query: 227  TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
             +Q         EE+    + ++  + D+     D SG        + I++T+  +  ++
Sbjct: 1420 KKQTKLGIETRKEENYSDWYSQVITKADMIEY-YDVSGCYVLRPWSFAIWETIKKWFDKE 1478

Query: 287  IKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
            IK         P  + Q   + +  H   +   +  V  A ++       A++P +    
Sbjct: 1479 IKKLGVRNCYFPMFVSQGALEKEKTHIADFAPEVAWVTRAGNSEM-SEPIAIRPTSETVM 1537

Query: 345  VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNE 403
               +   +KS+R+LP+RL ++ +V R E        +R R F   + H  F T E+   E
Sbjct: 1538 YPSYAKWIKSHRDLPLRLNQWCNVVRWEFKHPT-PFLRTREFLWQEGHTAFQTAEEAHQE 1596

Query: 404  CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +I +L   +Y D     ++    +  EK  G D                         
Sbjct: 1597 VFQILDLYAKVYTDLLAIPVVKGRKSEKEKFAGGD------------------------- 1631

Query: 464  NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVM 522
                       +    E  +    GR  Q  T   +  N    F+  +            
Sbjct: 1632 -----------FTTTVEAYVP-VNGRAIQGATSHHLGQNFSKMFDISF--EDPNTGSKAY 1677

Query: 523  IHRAVFGSIERFIGIMIENFKGNLPLWL----SPIQAIVTTITSSA----------VEYA 568
            +++  +G   R IG M+     +  L L    +PIQ IV  +  +A          +  A
Sbjct: 1678 VYQNSWGLTTRTIGAMVMIHGDDFGLVLPPRVAPIQVIVVPVGITAQTSEEQRVSLISKA 1737

Query: 569  QEIAN-LLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS 626
            +EIA+ LL    +  E D R+  +  +K      K +PI +  G K+ +   +      S
Sbjct: 1738 KEIASMLLTEADIRAEADLRDNYSPGWKFNHWEQKGVPIRMEVGPKDVANSQVTCVIRHS 1797

Query: 627  TTTQKVSLLDAIPI 640
                 V + + I  
Sbjct: 1798 GKKVAVPMANLIAA 1811


>gi|261333461|emb|CBH16456.1| bifunctional aminoacyl-tRNA synthetase, putative [Trypanosoma
           brucei gambiense DAL972]
          Length = 808

 Score =  163 bits (411), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 71/421 (16%), Positives = 156/421 (37%), Gaps = 59/421 (14%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
             ++  + + ++  + ++     D SG        + I++++  +   +I+    E+   
Sbjct: 305 RRDNFSQWYTEVITKAEMIEY-YDVSGCYIMRPWSFFIWKSVQKFFGSRIEAMGVEDCYF 363

Query: 297 PQ-VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P  V    L ++  H + +   +  V  A ++  ++   A++P +       +   ++S+
Sbjct: 364 PMFVSKTCLEREKDHIEGFAPEVAWVTKAGESDLEV-PVAIRPTSETVMYPYYAKWIRSH 422

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISI 414
           R+LPVRL  + SV R E S  +   +R R F   + H  + T+E+   E L+I +   ++
Sbjct: 423 RDLPVRLNAWNSVVRWEFSHPM-PFIRTREFLWQEGHCAWQTEEECSREVLEILDHYAAV 481

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           Y D     ++    T  EK  G                                     +
Sbjct: 482 YTDLLAVPVVKGKKTEKEKFAGG------------------------------------Y 505

Query: 475 YGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           Y    E  +  A+GR  Q GT   +  N    FN  + +        ++  +  +G   R
Sbjct: 506 YTTTVETYI-AAVGRGCQGGTSHNLGQNFGKMFNICFQDPDKNDDSTLIPWQNSWGLSTR 564

Query: 534 FIGIMIENFKGNLPLWLSPI----QAIVTTIT----------SSAVEYAQEIANLLKSHH 579
            IG+ I     +  + L P     Q ++  +           +  ++  + +   L++  
Sbjct: 565 VIGVTIMVHGDDRGIVLPPRVACLQVVIIPVGITKDTRQEQRNVLLDGCKALEGELRTAG 624

Query: 580 LSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           + ++ D RN  +  ++     +K +P+ +  G KE   + + +        + V     I
Sbjct: 625 IRVKADLRNNYSPGWRFNHWELKGVPVRVELGPKEMETKQLSLVLRCDGQRRSVPWDGRI 684

Query: 639 P 639
            
Sbjct: 685 A 685


>gi|71748872|ref|XP_827775.1| prolyl-tRNA synthetase [Trypanosoma brucei TREU927]
 gi|70833159|gb|EAN78663.1| prolyl-trna synthetase, putative [Trypanosoma brucei]
          Length = 808

 Score =  163 bits (411), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 71/421 (16%), Positives = 156/421 (37%), Gaps = 59/421 (14%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
             ++  + + ++  + ++     D SG        + I++++  +   +I+    E+   
Sbjct: 305 RRDNFSQWYTEVITKAEMIEY-YDVSGCYIMRPWSFFIWKSVQKFFGSRIEAMGVEDCYF 363

Query: 297 PQ-VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P  V    L ++  H + +   +  V  A ++  ++   A++P +       +   ++S+
Sbjct: 364 PMFVSKTCLEREKDHIEGFAPEVAWVTKAGESDLEV-PVAIRPTSETVMYPYYAKWIRSH 422

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISI 414
           R+LPVRL  + SV R E S  +   +R R F   + H  + T+E+   E L+I +   ++
Sbjct: 423 RDLPVRLNAWNSVVRWEFSHPM-PFIRTREFLWQEGHCAWQTEEECSREVLEILDHYAAV 481

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           Y D     ++    T  EK  G                                     +
Sbjct: 482 YTDLLAVPVVKGKKTEKEKFAGG------------------------------------Y 505

Query: 475 YGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           Y    E  +  A+GR  Q GT   +  N    FN  + +        ++  +  +G   R
Sbjct: 506 YTTTVETYI-AAVGRGCQGGTSHNLGQNFGKMFNICFQDPDKNDDSTLIPWQNSWGLSTR 564

Query: 534 FIGIMIENFKGNLPLWLSPI----QAIVTTIT----------SSAVEYAQEIANLLKSHH 579
            IG+ I     +  + L P     Q ++  +           +  ++  + +   L++  
Sbjct: 565 VIGVTIMVHGDDRGIVLPPRVACLQVVIIPVGITKDTRQEQRNVLLDGCKALEGELRTAG 624

Query: 580 LSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           + ++ D RN  +  ++     +K +P+ +  G KE   + + +        + V     I
Sbjct: 625 IRVKADLRNNYSPGWRFNHWELKGVPVRVELGPKEMETKQLSLVLRCDGQRRSVPWDGRI 684

Query: 639 P 639
            
Sbjct: 685 A 685


>gi|313206166|ref|YP_004045343.1| prolyl-tRNA synthetase [Riemerella anatipestifer DSM 15868]
 gi|312445482|gb|ADQ81837.1| prolyl-tRNA synthetase [Riemerella anatipestifer DSM 15868]
 gi|315023150|gb|EFT36163.1| prolyl-tRNA synthetase [Riemerella anatipestifer RA-YM]
 gi|325336389|gb|ADZ12663.1| Prolyl-tRNA synthetase [Riemerella anatipestifer RA-GD]
          Length = 491

 Score =  163 bits (411), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 74/439 (16%), Positives = 164/439 (37%), Gaps = 76/439 (17%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
             E   + + +L  + DL   +     ++     G+ I++ +   + +K K+  +E    
Sbjct: 7   RSEDYSKWYNELVVKADLAENSGVRGCMVI-KPYGYAIWEKMRDELDKKFKETGHENAYF 65

Query: 297 PQVLDQHLWQ-QSGHWDSYRANMFAVKCA--------------DDTIKDLRTFALKPMNC 341
           P  + + L++ +  + + +      V                 D   K      ++P + 
Sbjct: 66  PIFVPKSLFEAEEKNAEGFAKECAVVTHYRLKTDPENPQKLMVDPEAKLEEELIVRPTSE 125

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQM 400
                 + + ++SYR+LP+ + ++ +V R E        +R   F   + H    TKE+ 
Sbjct: 126 AIIWNTYKNWVQSYRDLPILINQWANVVRWEMR--TRLFLRTAEFLWQEGHTAHATKEEA 183

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQ 460
             E  ++ N+     + F    ++  + +  E+  G++  +                   
Sbjct: 184 IAETEQMLNVYADFAEKFMAVPVVRGIKSPSERFAGAEETY------------------- 224

Query: 461 DRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCH 519
                              E +++D  G+  Q GT   +  N    F+  + N   +  +
Sbjct: 225 -----------------CIEALMQD--GKALQAGTSHFLGQNFAEAFDVKFTNKEGKIEY 265

Query: 520 PVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSS------AVEYAQ 569
                   +G   R +G +I    ++    LP  L+PIQ ++  I           E A 
Sbjct: 266 AWA---TSWGVSTRLMGALIMSHSDDNGLVLPPSLAPIQVVIVPIFKGEEQLKQIDEVAY 322

Query: 570 EIANLLKSHHLSIETDFRN-ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
           E+ + LK+  +S++ D R+     +K  E+ +K +P+ I  G ++   +++ I R  + +
Sbjct: 323 ELQSKLKALGISVKYDNRDTHKPGWKFAEYEMKGVPVRIAMGARDLENKTVEIARRDTLS 382

Query: 629 TQKVSLLDA---IPILTKE 644
            +   L +    I  L +E
Sbjct: 383 KEVKPLDNIEVYIQELLEE 401


>gi|256823089|ref|YP_003147052.1| prolyl-tRNA synthetase [Kangiella koreensis DSM 16069]
 gi|256796628|gb|ACV27284.1| prolyl-tRNA synthetase [Kangiella koreensis DSM 16069]
          Length = 571

 Score =  162 bits (410), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 67/338 (19%), Positives = 123/338 (36%), Gaps = 28/338 (8%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  L+       ++E   H+ + R   +  IA   SG+  W   G ++ + + + +R +
Sbjct: 4   SQYLLSTQREDPSDAELISHKLMLRAGMIRKIA---SGMYTWLPTGLRVLRKVEAIVREE 60

Query: 287 IK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P V    LW++SG WD +   +   K      +  R F L P +     
Sbjct: 61  MNKAGAIEMLMPSVQPSELWEESGRWDQFGPELLRFKD-----RHGRDFCLGPTHEEIIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           AV    + SY++LP    +  + +R+E      G+MR R F   DA+ F   E+  +E  
Sbjct: 116 AVIRDEINSYKQLPASFYQIQTKFRDEVRPRF-GVMRAREFLMKDAYSFHVDEESLSETY 174

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
           + +H    +I++  G +   V   T       S      AE+    +  + +      I 
Sbjct: 175 QVMHQAYCNIFERIGLDYRPVLADTGAIGGSNSHEFHVLAESGEDAIAFSSEGDYAANIE 234

Query: 465 TGVLLGEGAFYGPKFEYI------LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC 518
               L       P+ E        +K           +     + ++     +    E  
Sbjct: 235 KAQSLA------PQNEAQAPTQNLIKVETPNTKSIKQVCELLKVKAQQTVKTLLVVGEDE 288

Query: 519 HPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI 556
              ++   + G  E     + E   G  PL   P+Q I
Sbjct: 289 SNPVVALCLRGDHE-----LNEIKAGKHPLVAEPVQLI 321



 Score = 85.6 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/166 (17%), Positives = 63/166 (37%), Gaps = 13/166 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           I R  + G I Q+        N   ++ + +    V +    +G  + R +   IE N+ 
Sbjct: 404 IKRGIEVGHIFQLGNKYSEAMNCKVLDQNGKA---VTLAMGCYGVGVSRIVAAAIEQNYD 460

Query: 544 GNLPLWL---SPIQAIVTTITSSAVEYAQEIANLL----KSHHLSIETDFRNETINYKIR 596
            N  +W    +P Q  +  +     E  Q+IA+ L    +   + +  D R E       
Sbjct: 461 NNGIIWPQAIAPFQVAIIPMNMHRSEQVQQIADKLYQDLQQQGIDVIFDDRKERPGVMFS 520

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +  +  +P  ++  ++     +I  +   +T    VS+ + +  + 
Sbjct: 521 DMELIGVPHRLVVSERGLENGTIEYKNRQNTAKDDVSVENVVDYIK 566


>gi|332231899|ref|XP_003265132.1| PREDICTED: bifunctional aminoacyl-tRNA synthetase [Nomascus
            leucogenys]
          Length = 1512

 Score =  162 bits (410), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 76/445 (17%), Positives = 150/445 (33%), Gaps = 62/445 (13%)

Query: 226  NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
              +Q         EE+    + ++  + ++     D SG        + I++ +  +   
Sbjct: 1008 PKKQTRLGLEAKKEENLADWYSQVITKSEMIEYH-DVSGCYILRPWAYAIWEAIKDFFDA 1066

Query: 286  KIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPG 343
            +IK    E    P  + Q+  + +  H   +   +  V  +  T       A++P +   
Sbjct: 1067 EIKKLGVENCYFPMFVSQNALEKEKTHIADFAPEVAWVTRSGKTEL-AEPIAIRPTSETV 1125

Query: 344  HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFN 402
                +   ++S+R+LP++L ++ +V R E        +R R F   + H  F T E+   
Sbjct: 1126 MYPAYAKWVQSHRDLPIKLNQWCNVVRWEFKHP-QPFLRTREFLWQEGHSAFATMEEAAE 1184

Query: 403  ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
            E L+I +L   +Y++     ++    T  EK  G D                        
Sbjct: 1185 EVLQILDLYAQVYEELLAIPVVKGRKTEKEKFAGGD------------------------ 1220

Query: 463  INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
                        Y    E     A GR  Q GT        S+                 
Sbjct: 1221 ------------YTTTIE-AFISASGRAIQGGTSHHLGQNFSKMFEIVFEDPKTPGEKQF 1267

Query: 523  IHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTT----------ITSSAVEYA 568
             ++  +G   R IG+M      N+ L L P    +Q ++               + +   
Sbjct: 1268 AYQNSWGLTTRTIGVMTMVHGDNMGLVLPPRVACVQVVIIPCGITNALSEEDKEALIAKC 1327

Query: 569  QEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERS-IGIRRFGS 626
             +    L S ++ +  D R+  +  +K     +K +PI +  G ++      + +R   +
Sbjct: 1328 NDYRRRLLSVNIRVRADLRDNYSPGWKFNHWELKGVPIRLEVGPRDMKSCQFVAVR-RDT 1386

Query: 627  TTTQKVSLLDAIPILTKESLPPDCQ 651
                 V   +A   L  +++  D Q
Sbjct: 1387 GEKLTVVENEAETKL--QAILEDIQ 1409


>gi|299821392|ref|ZP_07053280.1| proline--tRNA ligase [Listeria grayi DSM 20601]
 gi|299817057|gb|EFI84293.1| proline--tRNA ligase [Listeria grayi DSM 20601]
          Length = 495

 Score =  162 bits (410), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 70/440 (15%), Positives = 162/440 (36%), Gaps = 56/440 (12%)

Query: 215 PMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWK 274
            ++  +Y       ++  + +   EE   + +  +  + +L   +     ++     G+ 
Sbjct: 5   EVMLFLYKKGGKKMKDFVKAITKREEDFAQWYTDVVLKAELASYSSVKGCMVI-RPTGYA 63

Query: 275 IFQTLISYMRRKIKD-DYEEINTPQVLDQH-LWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           +++ +  Y+ R +K   +E +  P ++ +  L Q++ H + +   +  +    +     R
Sbjct: 64  LWEGIQQYIDRHLKATGHENVYMPLLIPEGKLKQEAEHVEGFAPELAWITETGEEKLAER 123

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
             A++P +       F   + S+R+LP R  ++ +V R E   +    +R   F   + H
Sbjct: 124 -LAIRPTSEVLFAEHFKEIIHSHRDLPKRYNQWANVVRLEK--NTRPFLRTTEFLWQEGH 180

Query: 393 V-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
               T E+   E + I +L  ++ ++     ++    T  E+  G+   +          
Sbjct: 181 TCHETHEEAQEEVMAILDLYTAVCEELLAIPVVKGRKTARERFAGARETY---------- 230

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFY 510
                                       E ++ D  G+  Q  T   +     S F   +
Sbjct: 231 --------------------------TLETLMYD--GKALQIATSHDLGDVFSSAFGIEF 262

Query: 511 VNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSS 563
            N          ++++ +G   R IG +I    ++    LP  ++PIQ I+  I      
Sbjct: 263 TNREGID---TPVYQSSWGITTRTIGALIMVHGDDRGLMLPPRIAPIQVIIVPIAQHKEG 319

Query: 564 AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRR 623
            +   + I   L+   +  + D  ++   +K  E  +K IPI I  G ++     + + R
Sbjct: 320 VIAAGESILARLQEKGIRTKIDLSDKQPGWKFNESEMKGIPIRIEMGPRDMEAGQVIVVR 379

Query: 624 FGSTTTQKVSLLDAIPILTK 643
             +     V++      +T+
Sbjct: 380 RDTGEKTAVAMEGLEAYVTE 399


>gi|153953239|ref|YP_001394004.1| prolyl-tRNA synthetase [Clostridium kluyveri DSM 555]
 gi|146346120|gb|EDK32656.1| ProS [Clostridium kluyveri DSM 555]
          Length = 476

 Score =  162 bits (410), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 71/418 (16%), Positives = 161/418 (38%), Gaps = 60/418 (14%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
            +E   + +  + ++ +L   +     +I      + +++ +  Y+ R+ K+  +E +  
Sbjct: 12  RDEDFAKWYTDIVKKAELADYSSVRGCMII-RPYAYAMWEHIQGYLDRRFKETGHENVYM 70

Query: 297 PQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P  + + L + +  H + +   +  V    +         ++P +       +   ++SY
Sbjct: 71  PLFIPESLLEKEKDHVEGFAPEVAWVTQGGNEEL-TEKLCVRPTSETLFCEHYAKIVQSY 129

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISI 414
           ++LP    ++ SV R E   +    +R   F   + H    TKE+   E +++ N+   +
Sbjct: 130 KDLPKLYNQWCSVVRWEK--TTRPFLRTTEFLWQEGHTIHATKEEAEEETIRMLNIYEEL 187

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            ++     ++    T  EK  G +A +                                 
Sbjct: 188 CREMLAIPVLKGQKTESEKFAGGEATY--------------------------------- 214

Query: 475 YGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
                E ++ D  G+  Q GT      N    F   Y++ + +  +   +++  +G   R
Sbjct: 215 ---TIESLMHD--GKALQSGTSHYFGQNFAKPFEMQYLDKNGKLQY---VYQTSWGITTR 266

Query: 534 FIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDF 586
            IG +I    ++    +P  ++P+Q I+  I       +E A E+   L    + ++ D 
Sbjct: 267 IIGALIMVHGDDNGLVVPPRIAPLQVIIVPIAQHKEGVLEKADELKEELSKI-VRVKIDD 325

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS---LLDAIPIL 641
            ++   +K  EH +K +PI +  G K+ ++  + + R  +     V    L D +P L
Sbjct: 326 SDKMPGWKFSEHEMKGVPIRLEVGPKDIAKNQVVLVRRDTREKIMVPMSNLCDEVPAL 383


>gi|205373971|ref|ZP_03226772.1| prolyl-tRNA synthetase [Bacillus coahuilensis m4-4]
          Length = 476

 Score =  162 bits (410), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 72/417 (17%), Positives = 158/417 (37%), Gaps = 57/417 (13%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
           ++    + +  +  + +L   +     +I     G+KI++ +   + RKIK+  +E +  
Sbjct: 12  MDVDFAKWYTDVVTKAELVDYSSVRGSMII-RPYGYKIWEHIKDQLDRKIKETGHENVYM 70

Query: 297 PQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P  + + L Q +  H + +   +  V    +     R   ++P +       + + + SY
Sbjct: 71  PLFIPESLLQVEKDHIEGFAPEVAWVTHGGEEKLQER-LCVRPTSEVLFAEHYRNIIHSY 129

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISI 414
           R+LP    ++ +V R E   +    +R   F   + H    T+++   E  K+ N+  +I
Sbjct: 130 RDLPKLYNQWANVVRWEK--TTRPFLRTLEFLWQEGHTCHETEQEAIEETEKMLNVYATI 187

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            ++     ++    T  EK  G                                    A 
Sbjct: 188 CEELLAIPVIRGRKTEKEKFAG------------------------------------AT 211

Query: 475 YGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           +    E ++ D  G+  Q  T   +       F+  ++N    + H   + +  +G   R
Sbjct: 212 FTYTIESLMHD--GKALQAATSHFLGDRFAEAFSITFLNREGREQH---VQQTSWGFTTR 266

Query: 534 FIGIMIENFKGN----LPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDF 586
            IG MI     N    LP  ++P Q ++  I       +++A  +   +K+    ++ D 
Sbjct: 267 IIGAMIMVHGDNRGLVLPPNVAPTQVMIVPIAQHKEGVLDHAYGLKERVKTV-ARVDIDA 325

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            ++   +K  E  +K IPI +  G K+  +  + + R  +    +V + +    +T+
Sbjct: 326 SDKQPGWKFNESEMKGIPIRLEVGPKDMEQDQVILVRRDTGEKVQVGISEVEQKITE 382


>gi|289582184|ref|YP_003480650.1| prolyl-tRNA synthetase [Natrialba magadii ATCC 43099]
 gi|289531737|gb|ADD06088.1| prolyl-tRNA synthetase [Natrialba magadii ATCC 43099]
          Length = 493

 Score =  162 bits (410), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 58/385 (15%), Positives = 128/385 (33%), Gaps = 55/385 (14%)

Query: 270 RKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDT 327
            +G+ +++ +   +    K+   + +  P  + +   + +    + +   +  V      
Sbjct: 45  PRGYALWEAIQDALDGWFKETGVDNVYFPMFIPESFLEREKDIVEGFDPEVAWVTHGGHD 104

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
             + R  A++P +            +S+R+LP+RL ++ SV R E +       R + F 
Sbjct: 105 ELEER-LAVRPTSESIIAPFMADWTRSHRDLPLRLNQWCSVVRWEAT-ETKPFFRTKEFM 162

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENI 447
             + H     ++                                      + +W   +  
Sbjct: 163 WQEGHTAHATDESAW-----------------------------------EEVWTRLDQY 187

Query: 448 MKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRF 506
            K   + +                GA      E ++ D  G+  Q  T   +  +    F
Sbjct: 188 EKVYEEVLAIPVLRGKKPEHDKFPGADTTTTVEALMPD--GKSVQGATSHNLGQSFAEAF 245

Query: 507 NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL----SPIQAIVTTI-- 560
           +  +V+   E+      +   +G   R +G +I     +  L L    +P Q  +  I  
Sbjct: 246 DISFVDEDEEERTA---YTTSWGLSWRALGALIMTHSDDQGLVLPPTIAPTQVAIVPIWQ 302

Query: 561 ---TSSAVEYAQEIANLLKSHHLSIETDFRNET-INYKIREHSIKKIPIIIICGDKEASE 616
               +  +EY+Q IA+ L+    S+E D R+E    +K  EH +  +P+ +  G  E  +
Sbjct: 303 EETKADVLEYSQNIADELEEAGFSVELDDRDERNPGFKFNEHELNGVPLRLEIGPYEVED 362

Query: 617 RSIGIRRFGSTTTQKVSLLDAIPIL 641
             + +                +  +
Sbjct: 363 EEVTLVHRPDNEEAVEDRDGIVDAV 387


>gi|219853874|ref|YP_002470996.1| hypothetical protein CKR_0531 [Clostridium kluyveri NBRC 12016]
 gi|219567598|dbj|BAH05582.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 481

 Score =  162 bits (410), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 71/418 (16%), Positives = 161/418 (38%), Gaps = 60/418 (14%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
            +E   + +  + ++ +L   +     +I      + +++ +  Y+ R+ K+  +E +  
Sbjct: 17  RDEDFAKWYTDIVKKAELADYSSVRGCMII-RPYAYAMWEHIQGYLDRRFKETGHENVYM 75

Query: 297 PQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P  + + L + +  H + +   +  V    +         ++P +       +   ++SY
Sbjct: 76  PLFIPESLLEKEKDHVEGFAPEVAWVTQGGNEEL-TEKLCVRPTSETLFCEHYAKIVQSY 134

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISI 414
           ++LP    ++ SV R E   +    +R   F   + H    TKE+   E +++ N+   +
Sbjct: 135 KDLPKLYNQWCSVVRWEK--TTRPFLRTTEFLWQEGHTIHATKEEAEEETIRMLNIYEEL 192

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            ++     ++    T  EK  G +A +                                 
Sbjct: 193 CREMLAIPVLKGQKTESEKFAGGEATY--------------------------------- 219

Query: 475 YGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
                E ++ D  G+  Q GT      N    F   Y++ + +  +   +++  +G   R
Sbjct: 220 ---TIESLMHD--GKALQSGTSHYFGQNFAKPFEMQYLDKNGKLQY---VYQTSWGITTR 271

Query: 534 FIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDF 586
            IG +I    ++    +P  ++P+Q I+  I       +E A E+   L    + ++ D 
Sbjct: 272 IIGALIMVHGDDNGLVVPPRIAPLQVIIVPIAQHKEGVLEKADELKEELSKI-VRVKIDD 330

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS---LLDAIPIL 641
            ++   +K  EH +K +PI +  G K+ ++  + + R  +     V    L D +P L
Sbjct: 331 SDKMPGWKFSEHEMKGVPIRLEVGPKDIAKNQVVLVRRDTREKIMVPMSNLCDEVPAL 388


>gi|213969174|ref|ZP_03397313.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. tomato T1]
 gi|301384830|ref|ZP_07233248.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. tomato Max13]
 gi|302064183|ref|ZP_07255724.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. tomato K40]
 gi|302130620|ref|ZP_07256610.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. tomato NCPPB 1108]
 gi|213926172|gb|EEB59728.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. tomato T1]
          Length = 571

 Score =  162 bits (410), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 53/264 (20%), Positives = 99/264 (37%), Gaps = 12/264 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L        ++    H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQFLLATQKETPSDAVVVSHQLMLRAGMIRKLA---SGLYTWLPMGLRVLRKVEAIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      EI  P +    LWQ+SG W+ Y   +  +       +  R F L P +    
Sbjct: 60  EMNAAGALEILMPGIQPAELWQESGRWEQYGPELMRLVD-----RHNREFCLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+ + +  + +R+E      GLMR R F   DA+ F          
Sbjct: 115 TDLARNELNSYKQLPINMYQIQTKFRDEIRPRF-GLMRGREFVMKDAYSFHADNASLQVT 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             ++H    +++   G +   V+         GS      AE+    ++ +  +     I
Sbjct: 174 YDRMHLAYSNVFSRLGLKFRPVEADNGSIGGAGSHEFHVLAESGEDDIVFSNGSDYAANI 233

Query: 464 NTGVL-LGEGAFYGPKFEYILKDA 486
                   E A      E  L D 
Sbjct: 234 EKAEAVPREKARAAATEELRLVDT 257



 Score = 81.0 bits (198), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 31/177 (17%), Positives = 66/177 (37%), Gaps = 14/177 (7%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
           P  +      I R  + G I Q+            +  + +   PV +    +G  + R 
Sbjct: 393 PSPDGQGTLEIKRGIEVGHIFQLGTKYSEAMKCQVLGENGK---PVNLAMGCYGIGVSRV 449

Query: 535 IGIMIE-NFKGNLPLW---LSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFR 587
           +   IE N   N  +W   L+P Q  +  +   T +  E   ++   L +    +  D R
Sbjct: 450 VAAAIEQNSDENGIIWNDTLAPFQIALIPLRYETDAVREATDKLYAELTTAGFEVLLDDR 509

Query: 588 NET--INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           ++      K  +  +  IP  I+  D+  +E ++  +    +  Q +++ D +  + 
Sbjct: 510 DKKTSPGIKFADMELIGIPHRIVVSDRSLAEGNLEYKSRTESQPQAIAVADVLSFIQ 566


>gi|330752678|emb|CBL88143.1| prolyl-tRNA synthetase [uncultured Cytophagia bacterium]
          Length = 491

 Score =  162 bits (410), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 74/439 (16%), Positives = 156/439 (35%), Gaps = 75/439 (17%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
             EE+    + +L ++  L   +     +I     G+ I++ +   +    K+  +E   
Sbjct: 7   NREENYSLWYNELVKKAGLAENSPVRGCMII-KPYGFSIWEKMQQQLDIMFKNTGHENAY 65

Query: 296 TPQVLDQHLW-QQSGHWDSYRANMFAVKCA-------------DDTIKDLRTFALKPMNC 341
            P  + +    +++ H + +      V                D   K      ++P + 
Sbjct: 66  FPLFIPKSHLSKEADHIEGFAKECAVVTHYRLKNDENGKELIVDPDAKLEDELIVRPTSE 125

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQM 400
                 + + ++SYR+LP+ + ++ +V R E        +R   F   + H    T+E+ 
Sbjct: 126 TVIWDTYKNWIQSYRDLPLLINQWANVIRWEMR--TRLFLRTTEFLWQEGHTAHATQEEA 183

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQ 460
             E  ++  +     + +                                    +     
Sbjct: 184 ILETQQMLEVYSDFVEKY------------------------------------MALPVT 207

Query: 461 DRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCH 519
             + +      GA      E +++D  G+  Q GT   +  N    FN  + N   ++  
Sbjct: 208 KGVKSESERFAGAVDTYCIEALMQD--GKALQAGTSHFLGQNFAKAFNVKFTNKEGKED- 264

Query: 520 PVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI--TSSAVEY----AQ 569
             ++    +G   R +G +I    ++    LP  L+PIQ ++  I      +E      +
Sbjct: 265 --LVWGTSWGVSTRLMGALIMAHSDDDGLVLPPNLAPIQVVIIPIYKGEEQLERIALKVE 322

Query: 570 EIANLLKSHHLSIETDFRN-ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
           +I N L S  +S++ D R+     +K  E+ +K +P+ I  G K+    ++ I R  +  
Sbjct: 323 KIRNSLISKGISVKFDRRDTHKPGWKFAEYELKGVPLRIAIGPKDLDNGTLEIARRDTKE 382

Query: 629 TQKVSLL---DAIPILTKE 644
            +   +    D I  L KE
Sbjct: 383 KKSYPVDGIEDKIQFLLKE 401


>gi|28871133|ref|NP_793752.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|81840044|sp|Q87Y24|SYP_PSESM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|28854383|gb|AAO57447.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. tomato str.
           DC3000]
          Length = 571

 Score =  162 bits (410), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 53/264 (20%), Positives = 99/264 (37%), Gaps = 12/264 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L        ++    H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQFLLATQKETPSDAVVVSHQLMLRAGMIRKLA---SGLYTWLPMGLRVLRKVEAIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      EI  P +    LWQ+SG W+ Y   +  +       +  R F L P +    
Sbjct: 60  EMNAVGALEILMPGIQPAELWQESGRWEQYGPELMRLVD-----RHNREFCLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+ + +  + +R+E      GLMR R F   DA+ F          
Sbjct: 115 TDLARNELNSYKQLPINMYQIQTKFRDEIRPRF-GLMRGREFVMKDAYSFHADNASLQVT 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             ++H    +++   G +   V+         GS      AE+    ++ +  +     I
Sbjct: 174 YDRMHLAYSNVFSRLGLKFRPVEADNGSIGGAGSHEFHVLAESGEDDIVFSNGSDYAANI 233

Query: 464 NTGVL-LGEGAFYGPKFEYILKDA 486
                   E A      E  L D 
Sbjct: 234 EKAEAVPREKARAAATEELRLVDT 257



 Score = 82.9 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/177 (17%), Positives = 66/177 (37%), Gaps = 14/177 (7%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
           P  +      I R  + G I Q+            +  + +   PV +    +G  + R 
Sbjct: 393 PSPDGQGTLEIKRGIEVGHIFQLGTKYSEAMKCQVLGENGK---PVNLAMGCYGIGVSRV 449

Query: 535 IGIMIE-NFKGNLPLW---LSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFR 587
           +   IE N   N  +W   L+P Q  +  +   T +  E   ++   L +    +  D R
Sbjct: 450 VAAAIEQNSDENGIIWNDTLAPFQIALIPLRYETDAVREATDKLYAELTAAGFEVLLDDR 509

Query: 588 NET--INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           ++      K  +  +  IP  I+  D+  +E ++  +    +  Q +++ D +  + 
Sbjct: 510 DKKTSPGIKFADMELIGIPHRIVVSDRGLAEGNLEYKSRTESQPQAIAVADVLSFIQ 566


>gi|295135607|ref|YP_003586283.1| prolyl-tRNA synthetase [Zunongwangia profunda SM-A87]
 gi|294983622|gb|ADF54087.1| prolyl-tRNA synthetase [Zunongwangia profunda SM-A87]
          Length = 492

 Score =  162 bits (410), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 62/434 (14%), Positives = 162/434 (37%), Gaps = 73/434 (16%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
            E+   + + +L  + DL   +     ++     G+ I++ + + + R  K+  ++    
Sbjct: 8   REQDYSKWYNELVVKADLAENSAVRGCMVI-KPYGYAIWEKMQAELDRMFKETGHQNAYF 66

Query: 297 PQVLDQHLWQ-QSGHWDSYRANMFAVKCA--------------DDTIKDLRTFALKPMNC 341
           P  + + L++ +  + + +      V                 D   K      ++P + 
Sbjct: 67  PLFVPKSLFEAEEKNAEGFAKECAVVTHYRLKTDEENKGKLIVDPAAKLEEELVVRPTSE 126

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQM 400
                 + + ++SYR+LP+ + ++ +V R E        +R   F   + H    T+++ 
Sbjct: 127 AVIWNTYKNWIQSYRDLPILINQWANVVRWEMR--TRLFLRTSEFLWQEGHTAHATRQEA 184

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQ 460
             E ++++++     ++F    ++    T  E+  G++  +                   
Sbjct: 185 LAETMQMNDIYAEFVENFMATPVIKGAKTENERFAGAEETY------------------- 225

Query: 461 DRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCH 519
                              E +++D  G+  Q GT   +  N    F+  +        H
Sbjct: 226 -----------------CIEALMQD--GKALQAGTSHFLGQNFAKAFDVKFATKEGGLEH 266

Query: 520 PVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTIT------SSAVEYAQ 569
              +    +G   R +G ++    ++    LP  L+PIQ ++  I           + A 
Sbjct: 267 ---VWATSWGVSTRLMGALVMTHSDDKGLVLPPKLAPIQVVIVPIYKSEEQLDQISDVAN 323

Query: 570 EIANLLKSHHLSIETDFRN-ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
            +   L++  +S++ D R+     +K  ++ ++ +P+ +  G K+  + ++ + R  + T
Sbjct: 324 GLVKDLRAKGISVKFDNRDTHKPGWKFAQYELQGVPVRLAIGPKDIEKGTVELARRDTLT 383

Query: 629 TQKVSLLDAIPILT 642
            + V +   +  + 
Sbjct: 384 KEFVEMDGVVEKVV 397


>gi|325120098|emb|CBZ55652.1| putative prolyl-tRNA synthetase [Neospora caninum Liverpool]
          Length = 656

 Score =  162 bits (410), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 65/351 (18%), Positives = 128/351 (36%), Gaps = 55/351 (15%)

Query: 306 QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEF 365
           ++  H + +   +  V    D+       A++P +       ++  ++S+R+LP++L ++
Sbjct: 233 KEKDHVEGFSPEVAWVTHYGDSPL-AEKIAIRPTSETIMYPAYSKWIRSHRDLPLKLNQW 291

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
            SV R E        +R R F   + H    T+E+ +   L I  L    Y++     ++
Sbjct: 292 CSVVRWEFKQPT-PFLRTREFLWQEGHTAHATEEEAWQLVLDILELYRRWYEECLAVPVI 350

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
               +  EK  G                                           E  + 
Sbjct: 351 KGEKSENEKFAGGKK------------------------------------TTTVEAYI- 373

Query: 485 DAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
              GR  Q  T   +  N    F   + +    K    ++H+  +G   R +G+MI    
Sbjct: 374 AENGRGIQAATSHLLGTNFAKMFEIEFEDEEGHKR---LVHQTSWGCTTRSLGVMIMTHG 430

Query: 544 GNLPLWLSP----IQAIVTTI------TSSAVEYAQEIANLLKSHHLSIETDFR-NETIN 592
            +  + L P    +Q I+  I      T+  V   +E+  LL+   + +  D R N T  
Sbjct: 431 DDKGIVLPPRVASVQVIIIPILFKDENTAEIVAKCRELKALLEKADIRVRIDDRPNYTPG 490

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +K     +K +P+ +  G K+ ++ S  + R  +    +V   + +P L +
Sbjct: 491 WKYNHWEVKGVPLRLELGPKDLAKGSARVVRRDTNEAYQVQWDELVPKLQE 541


>gi|282859312|ref|ZP_06268424.1| proline--tRNA ligase [Prevotella bivia JCVIHMP010]
 gi|282587892|gb|EFB93085.1| proline--tRNA ligase [Prevotella bivia JCVIHMP010]
          Length = 493

 Score =  162 bits (410), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 66/426 (15%), Positives = 152/426 (35%), Gaps = 70/426 (16%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
              ++  + +  L  + DL   +     ++     G+ I++ + + + +  K    +   
Sbjct: 10  KRADNYSQWYNDLVVKADLAEQSAVRGCMVI-KPYGYAIWENIQAQLDKMFKATGVQNAY 68

Query: 296 TPQVLDQHLW-QQSGHWDSYRANMFAVKCA-------------DDTIKDLRTFALKPMNC 341
            P ++ +    +++ H + +      V                D + K      ++P + 
Sbjct: 69  FPLLIPKSFLSREAEHVEGFAKEAAVVTHYRLKTKENGGGVEVDPSAKLEEELIIRPTSE 128

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
                 + + + S+R+LP+   ++ +V R E        +R   F   + H   T     
Sbjct: 129 TIIWNTYKNWIHSWRDLPLMCNQWCNVMRWEMR--TRPFLRTSEFLWQEGH---TAHATK 183

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E  K   L++ +Y DF                         AE  +             
Sbjct: 184 EEAEKEAKLMLKVYADF-------------------------AEKWLA-------VPVIQ 211

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHP 520
            + +      GA      E +++D  G+  Q GT   +  N    F+  ++N  ++   P
Sbjct: 212 GVKSETERFAGALDTYTIEAMMQD--GKALQSGTSHFLGQNFAKSFDVTFLNKENK---P 266

Query: 521 VMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAV------EYAQE 570
             +    +G   R IG +I    ++    LP  ++PIQ ++  I           +  Q 
Sbjct: 267 EYVWATSWGVSTRLIGALIMTHSDDNGLVLPPKIAPIQVVIVPIFKGEEQLQQLTDKLQP 326

Query: 571 IANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           + + L+   ++++ D   N+   +K  ++ +K +P+ +  G ++    +I + R  +   
Sbjct: 327 VIDDLREAGITVKFDNSDNKRPGFKFADYELKGVPVRLAMGGRDLENNTIEVMRRDTLEK 386

Query: 630 QKVSLL 635
           + VS  
Sbjct: 387 ESVSFD 392


>gi|330964813|gb|EGH65073.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. actinidiae str.
           M302091]
          Length = 571

 Score =  162 bits (409), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 53/264 (20%), Positives = 99/264 (37%), Gaps = 12/264 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L        ++    H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQFLLATQKETPSDAVVVSHQLMLRAGMIRKLA---SGLYTWLPMGLRVLRKVEAIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      EI  P +    LWQ+SG W+ Y   +  +       +  R F L P +    
Sbjct: 60  EMNAAGALEILMPGIQPAELWQESGRWEQYGPELMRLVD-----RHNREFCLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+ + +  + +R+E      GLMR R F   DA+ F          
Sbjct: 115 TDLARNELNSYKQLPINMYQIQTKFRDEIRPRF-GLMRGREFVMKDAYSFHADNASLQVT 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             ++H    +++   G +   V+         GS      AE+    ++ +  +     I
Sbjct: 174 YDRMHLAYSNVFSRLGLKFRPVEADNGSIGGAGSHEFHVLAESGEDDIVFSNGSDYAANI 233

Query: 464 NTGVL-LGEGAFYGPKFEYILKDA 486
                   E A      E  L D 
Sbjct: 234 EKAEAVPREKARAAATEELRLVDT 257



 Score = 82.9 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/177 (17%), Positives = 66/177 (37%), Gaps = 14/177 (7%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
           P  +      I R  + G I Q+            +  + +   PV +    +G  + R 
Sbjct: 393 PSPDGQGTLEIKRGIEVGHIFQLGTKYSEAMKCQVLGENGK---PVNLAMGCYGIGVSRV 449

Query: 535 IGIMIE-NFKGNLPLW---LSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFR 587
           +   IE N   N  +W   L+P Q  +  +   T +  E   ++   L +    +  D R
Sbjct: 450 VAAAIEQNSDENGIIWNDTLAPFQIALIPLRYETDAVREATDKLYAELTAAGFEVLLDDR 509

Query: 588 NET--INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           ++      K  +  +  IP  I+  D+  +E ++  +    +  Q +++ D +  + 
Sbjct: 510 DKKTSPGIKFADMELIGIPHRIVVSDRGLAEGNLEYKSRTESQPQAIAVADVLSFIQ 566


>gi|332664741|ref|YP_004447529.1| Prolyl-tRNA synthetase [Haliscomenobacter hydrossis DSM 1100]
 gi|332333555|gb|AEE50656.1| Prolyl-tRNA synthetase [Haliscomenobacter hydrossis DSM 1100]
          Length = 489

 Score =  162 bits (409), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 63/423 (14%), Positives = 153/423 (36%), Gaps = 69/423 (16%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
             E+    +  + +  +L   +     ++     G+ I++ +   + +  K+  +     
Sbjct: 8   RSENYSDWYIDIVKRANLADNSAVRGCMVI-KPYGFAIWENIRDQLDKMFKETGHVNAYF 66

Query: 297 PQVLDQHLW-QQSGHWDSYRANMFAVKCA-------------DDTIKDLRTFALKPMNCP 342
           P  + +    +++ H   +      V                D   K      ++P +  
Sbjct: 67  PLFIPKSFLSKEAQHVAGFAKECAVVTHHRLMNDPDGGGIIVDPDSKLEEELIVRPTSET 126

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMF 401
                +   + SYR+LP+ + ++ +V R E        +R   F   + H    TKE+  
Sbjct: 127 IIWDTYRTWINSYRDLPLLINQWANVVRWEMR--TRLFLRTTEFLWQEGHTAHATKEEAV 184

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E LKI ++  +  +++    ++  + T  E+  G++  +                    
Sbjct: 185 EETLKILDIYATFAEEYMAMPVIRGIKTANERFAGAEETY-------------------- 224

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHP 520
                             E +++D  G+  Q GT   +  N    F+  ++N ++++ + 
Sbjct: 225 ----------------CIEALMQD--GKALQAGTSHFLGQNFAKAFDVKFLNENNQQEY- 265

Query: 521 VMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIAN 573
             +    +G   R +G +I    ++    +P  L+P Q ++  I   +    E   +I  
Sbjct: 266 --VWATSWGVSTRLMGGLIMTHSDDDGLVVPPKLAPTQVVIVPIPKPSPVIDEVVHKIMA 323

Query: 574 LLKSHHLSIETD-FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
            LK+  + ++ D        +K  EH +  IP+ +  G+++ +   + + R  +    + 
Sbjct: 324 ALKAKGIRVKYDMDMKNRPGFKFAEHEMHGIPVRLAIGERDLANGQVEVARRDTKEKTQQ 383

Query: 633 SLL 635
            L 
Sbjct: 384 PLE 386


>gi|330872665|gb|EGH06814.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. morsprunorum str.
           M302280PT]
          Length = 571

 Score =  162 bits (409), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 53/264 (20%), Positives = 99/264 (37%), Gaps = 12/264 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L        ++    H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQFLLATQKETPSDAVVVSHQLMLRAGMIRKLA---SGLYTWLPMGLRVLRKVEAIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      EI  P +    LWQ+SG W+ Y   +  +       +  R F L P +    
Sbjct: 60  EMNAAGALEILMPGIQPAELWQESGRWEQYGPELMRLVD-----RHNREFCLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+ + +  + +R+E      GLMR R F   DA+ F          
Sbjct: 115 TDLARNELNSYKQLPINMYQIQTKFRDEIRPRF-GLMRGREFVMKDAYSFHADNASLQVT 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             ++H    +++   G +   V+         GS      AE+    ++ +  +     I
Sbjct: 174 YDRMHLAYSNVFSRLGLKFRPVEADNGSIGGAGSHEFHVLAESGEDDIVFSNGSDYAANI 233

Query: 464 NTGVL-LGEGAFYGPKFEYILKDA 486
                   E A      E  L D 
Sbjct: 234 EKAEAVPREKARAAATEELRLVDT 257



 Score = 82.9 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/177 (17%), Positives = 66/177 (37%), Gaps = 14/177 (7%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
           P  +      I R  + G I Q+            +  + +   PV +    +G  + R 
Sbjct: 393 PSPDGQGTLEIKRGIEVGHIFQLGTKYSEAMKCQVLGENGK---PVNLAMGCYGIGVSRV 449

Query: 535 IGIMIE-NFKGNLPLW---LSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFR 587
           +   IE N   N  +W   L+P Q  +  +   T +  E   ++   L +    +  D R
Sbjct: 450 VAAAIEQNSDENGIIWNDTLAPFQIALIPLRYETDAVREATDKLYAELTAAGFEVLLDDR 509

Query: 588 NET--INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           ++      K  +  +  IP  I+  D+  +E ++  +    +  Q +++ D +  + 
Sbjct: 510 DKKTSPGIKFADMELIGIPHRIVVSDRGLAEGNLEYKSRTESQPQAIAVADVLSFIQ 566


>gi|331016426|gb|EGH96482.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str.
           M302278PT]
          Length = 544

 Score =  162 bits (409), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 53/264 (20%), Positives = 99/264 (37%), Gaps = 12/264 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L        ++    H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQFLLATQKETPSDAVVVSHQLMLRAGMIRKLA---SGLYTWLPMGLRVLRKVEAIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      EI  P +    LWQ+SG W+ Y   +  +       +  R F L P +    
Sbjct: 60  EMNAAGALEILMPGIQPAELWQESGRWEQYGPELMRLVD-----RHNREFCLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+ + +  + +R+E      GLMR R F   DA+ F          
Sbjct: 115 TDLARNELNSYKQLPINMYQIQTKFRDEIRPRF-GLMRGREFVMKDAYSFHADNASLQVT 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             ++H    +++   G +   V+         GS      AE+    ++ +  +     I
Sbjct: 174 YDRMHLAYSNVFSRLGLKFRPVEADNGSIGGAGSHEFHVLAESGEDDIVFSNGSDYAANI 233

Query: 464 NTGVL-LGEGAFYGPKFEYILKDA 486
                   E A      E  L D 
Sbjct: 234 EKAEAVPREKARAAATEELRLVDT 257



 Score = 72.1 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 57/154 (37%), Gaps = 14/154 (9%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
           P  +      I R  + G I Q+            +  + +   PV +    +G  + R 
Sbjct: 393 PSPDGQGTLEIKRGIEVGHIFQLGTKYSEAMKCQVLGENGK---PVNLAMGCYGIGVSRV 449

Query: 535 IGIMIE-NFKGNLPLW---LSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFR 587
           +   IE N   N  +W   L+P Q  +  +   T +  E   ++   L +    +  D R
Sbjct: 450 VAAAIEQNSDENGIIWNDTLAPFQIALIPLRYETDAVREATDKLYAELTAAGFEVLLDDR 509

Query: 588 NET--INYKIREHSIKKIPIIIICGDKEASERSI 619
           ++      K  +  +  IP  I+  D+  +E ++
Sbjct: 510 DKKTSPGIKFADMELIGIPHRIVVSDRGLAEGNL 543


>gi|125972853|ref|YP_001036763.1| phosphoribulokinase/uridine kinase [Clostridium thermocellum ATCC
           27405]
 gi|256005723|ref|ZP_05430678.1| TGS domain protein [Clostridium thermocellum DSM 2360]
 gi|125713078|gb|ABN51570.1| phosphoribulokinase/uridine kinase [Clostridium thermocellum ATCC
           27405]
 gi|255990296|gb|EEU00423.1| TGS domain protein [Clostridium thermocellum DSM 2360]
 gi|316940909|gb|ADU74943.1| TGS domain-containing protein [Clostridium thermocellum DSM 1313]
          Length = 557

 Score =  162 bits (409), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 55/212 (25%), Positives = 96/212 (45%), Gaps = 2/212 (0%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEI 61
           + IK+ FPD S +      +  +++ES         VA  +N  + +LS  + E   +E 
Sbjct: 7   NMIKVVFPDNSEREVYEGISLQELSESCKNQYKSTIVAAKVNNDIKELSYRLNESCRVEF 66

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           I   D   + + + S + I+ +AV  ++P+ +V I   I  G Y +   + P + +E+  
Sbjct: 67  IDLTDDDGMRIYKRSLSFILIKAVNDLFPDRKVIICHSISKGIYCEVKGDTPLTVEEVDM 126

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           I+ +M+EI+    PF+K+ +S ++ARE+F       +   +E    K  VTLY    + D
Sbjct: 127 IKNRMKEIVNLKIPFIKKIMSLDEAREVFRKIGRMDRFRSIE-YRKKPYVTLYECDGFQD 185

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSN 213
              G  V  TG + KF       G        
Sbjct: 186 YFYGYMVPHTGYLDKFDLKYYQPGLILMSPEK 217


>gi|254508889|ref|ZP_05120998.1| threonyl-tRNA synthetase [Vibrio parahaemolyticus 16]
 gi|219548203|gb|EED25219.1| threonyl-tRNA synthetase [Vibrio parahaemolyticus 16]
          Length = 129

 Score =  162 bits (409), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 49/119 (41%), Positives = 72/119 (60%)

Query: 526 AVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD 585
           A+ GS+ERFIGI+IE + G  P WLSP QA++  IT    +YAQE+A  L+   +  + D
Sbjct: 1   AILGSLERFIGILIEEYFGFFPTWLSPEQAVIMNITDKQADYAQEVAQKLQKVGIRAKAD 60

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            RNE I +KIREH++K++P +++CGD+E     I +R        K  + D I  +  E
Sbjct: 61  LRNEKIGFKIREHTLKRVPYMLVCGDQEMEAGEIAVRTRKGKDLGKFKVDDFISYIQDE 119


>gi|164656383|ref|XP_001729319.1| hypothetical protein MGL_3354 [Malassezia globosa CBS 7966]
 gi|159103210|gb|EDP42105.1| hypothetical protein MGL_3354 [Malassezia globosa CBS 7966]
          Length = 723

 Score =  162 bits (409), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 69/436 (15%), Positives = 152/436 (34%), Gaps = 68/436 (15%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
                    ++++ R+ D+     D SG        + +++++  +   +IK    +  +
Sbjct: 218 RKNLDFPEWYQQVLRKGDMLDY-YDVSGCYILKPWSYYVWESIQRFFDAEIKKIGVQNCS 276

Query: 296 TPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
            P  +   + + +  H + +   +  V  A  +  +    A++P +       +   ++S
Sbjct: 277 FPMFVSSDVLEREKDHVEGFAPEVAWVTKAGKSDLEK-PVAIRPTSETVMYPYYAKWIQS 335

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT-KEQMFNECLKIHNLIIS 413
           +R+LP+RL ++ SV R E        +R R F   + H     KEQ   E   I +L   
Sbjct: 336 HRDLPLRLNQWNSVVRWEFKHP-QPFLRTREFLWQEGHTAHLHKEQADEEVRYILDLYRR 394

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           +Y++                                     +       + +      G 
Sbjct: 395 VYEEL------------------------------------LALPVVPGVKSEKEKFAGG 418

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS----HSEKCHPV---MIHRA 526
            Y    E  +    GR  Q GT        SR     V         +  P     + + 
Sbjct: 419 LYTTTVEGYVPTT-GRGVQGGTSHSLGQNFSRMFDITVQDPKATDETRGKPEGRLFVWQN 477

Query: 527 VFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTT----------ITSSAVEYAQEIA 572
            +G   R IG+M+     +  L + P    +Q ++            +  +  +   ++A
Sbjct: 478 SWGLSTRTIGVMVMVHGDDKGLVMPPRVSQVQVVLVPCGLGVKVSQDVKDAVNKTCDDVA 537

Query: 573 NLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
             L++  +    D R+     +K  +  ++ +P+ +  G K+ S +S+   R  +   + 
Sbjct: 538 EQLRTRGIRAHADLRDNYNPGFKFNDWELRGVPLRLEVGPKDLSNQSLIAVRRDTGAKES 597

Query: 632 V---SLLDAIPILTKE 644
           +   SL  ++P+L  +
Sbjct: 598 LALNSLDQSVPMLLDQ 613


>gi|305664978|ref|YP_003861265.1| prolyl-tRNA synthetase [Maribacter sp. HTCC2170]
 gi|88707390|gb|EAQ99635.1| prolyl-tRNA synthetase [Maribacter sp. HTCC2170]
          Length = 491

 Score =  162 bits (409), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 68/443 (15%), Positives = 155/443 (34%), Gaps = 72/443 (16%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEI-- 294
              E   + + +L  + DL   +     ++     G+ I++ + + + +  K+   E   
Sbjct: 7   KRSEDYSKWYNELVVKADLAENSGVRGCMVI-KPYGFAIWEKMQAGLDKMFKETGHENAY 65

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCA-------------DDTIKDLRTFALKPMNC 341
               +   +L +++ H + +      V                D   K      ++P + 
Sbjct: 66  FPLFIPKSYLSKEASHVEGFAKECAVVTHYRLKNDESGKGIIVDPDAKLEEELIVRPTSE 125

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
                 +   ++SYR+LP+ + ++ +V R E        +R   F   + H     E+  
Sbjct: 126 TIIWDTYRKWIQSYRDLPLLINQWANVVRWEMR--TRLFLRTAEFLWQEGHTAHATEK-- 181

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E ++    ++ +Y DF                                  + +      
Sbjct: 182 -EAIEEAEQMMHVYADF--------------------------------AENHMAVPVIK 208

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHP 520
            I T      GA      E +++D  G+  Q GT   +  N    F+  +     ++ + 
Sbjct: 209 GIKTESERFAGAIETYCIEALMQD--GKALQAGTSHFLGQNFAKAFDVKFATKEGKQEY- 265

Query: 521 VMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTIT------SSAVEYAQE 570
             +    +G   R +G ++    ++    LP  L+PIQ ++  I        +  E    
Sbjct: 266 --VWATSWGVSTRLMGALVMTHSDDSGLVLPPKLAPIQVVIVPIYRGLEQLDAISEKVGP 323

Query: 571 IANLLKSHHLSIETDFRN-ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           +   L++  +S++ D R+     +K  E+ +K +P+ +  G ++    +  + R  +   
Sbjct: 324 LVKELRAKGISVKYDSRDTHKPGFKFNEYELKGVPVRLAIGQRDMENGTYEVARRDTFEK 383

Query: 630 QKVSLLDAIPILTKESLPPDCQK 652
             +   + +  +  E L  D QK
Sbjct: 384 VTIPEDEVVSKI--EFLLEDIQK 404


>gi|170723171|ref|YP_001750859.1| prolyl-tRNA synthetase [Pseudomonas putida W619]
 gi|226701321|sp|B1JD82|SYP_PSEPW RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|169761174|gb|ACA74490.1| prolyl-tRNA synthetase [Pseudomonas putida W619]
          Length = 571

 Score =  162 bits (409), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 56/264 (21%), Positives = 103/264 (39%), Gaps = 12/264 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L        ++    H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLATQKETPADAVVISHQLMLRAGMIRKLA---SGLYTWLPMGLRVMRKVEAVVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P +    LWQ+SG W+ Y   +  +K      +  R F + P +    
Sbjct: 60  EMNAAGALEVLMPSIQPAELWQESGRWEQYGPELLRLKD-----RHQRDFCVGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+ + +  + +R+E      GLMR R F   DA+ F   +    E 
Sbjct: 115 TDLARNELSSYKQLPLNMYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSFHADQASLQET 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             ++H    +I+   G +   V+  T       S      AE+    V+ +  +     I
Sbjct: 174 YDRMHQAYSNIFTRLGLDFRPVQADTGSIGGSYSHEFHVLAESGEDDVIFSDSSDYAANI 233

Query: 464 NTGVL-LGEGAFYGPKFEYILKDA 486
                   E A   P  E  L D 
Sbjct: 234 EKAEAIPRETARLAPTEELRLVDT 257



 Score = 83.3 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 64/177 (36%), Gaps = 14/177 (7%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
           P  +      I R  + G I Q+            +  + +   PV++    +G  + R 
Sbjct: 393 PSPDGQGTLVIKRGIEVGHIFQLGTKYSEALKCQVLGENGK---PVVLSMGCYGIGVSRV 449

Query: 535 IGIMIE-NFKGNLPLW---LSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFR 587
           +   IE ++     +W   L+P Q  +  +   T    E   ++   L +    +  D R
Sbjct: 450 VAAAIEQSYDDKGIIWNDALAPFQIALVPLRYETDVVREATDKLYAELTAAGFEVLLDDR 509

Query: 588 NET--INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           ++      K  +  +  IP  I+  D+  ++ ++  +       Q + L + +  L 
Sbjct: 510 DKKTSPGIKFADMELIGIPHRIVVSDRGLADGNLEYKHRTEQDAQALPLNEVLTFLQ 566


>gi|70728636|ref|YP_258385.1| prolyl-tRNA synthetase [Pseudomonas fluorescens Pf-5]
 gi|114152231|sp|Q4KH98|SYP_PSEF5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|68342935|gb|AAY90541.1| prolyl-tRNA synthetase [Pseudomonas fluorescens Pf-5]
          Length = 571

 Score =  162 bits (409), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 48/245 (19%), Positives = 93/245 (37%), Gaps = 11/245 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L        ++    H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLATQKETPSDAVVISHQLMLRAGMIRKLA---SGLYTWLPMGLRVMRKVEAIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P      LWQ+SG W+ Y   +   K      +  R F   P +    
Sbjct: 60  EMNAAGALEVLMPSTQPAELWQESGRWEEYGPELLRFKD-----RHGRDFCAGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+ L +  + +R+E      GLMR R F   DA+ F   +      
Sbjct: 115 TDLARNELSSYKQLPLNLYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSFHADQASLQVT 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             ++H    +++   G +   V+         GS      AE+    ++ +  +     I
Sbjct: 174 YDRMHQAYCNVFTRLGLKFRPVEADNGSIGGAGSHEFHVLAESGEDDIVFSNGSDYAANI 233

Query: 464 NTGVL 468
                
Sbjct: 234 EKAEA 238



 Score = 81.0 bits (198), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 62/166 (37%), Gaps = 12/166 (7%)

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKG 544
           I R  + G I    N  S+     V    E   PV +    +G  + R +   IE N   
Sbjct: 403 IKRGIEVGHIFQLGNKYSKAMKCEVL--GENGKPVTLEMGCYGIGVSRVVAAAIEQNNDA 460

Query: 545 NLPLW---LSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNET--INYKIR 596
           N  +W   L+P Q  +  +   T    E   ++ + L +    +  D R++      K  
Sbjct: 461 NGIIWSDTLAPFQIALVPLRYETEQVREATDKLYSELTAAGFEVLLDDRDKKTSPGIKFA 520

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +  +  IP  I+  D+  +E ++  +       Q + + D +  L 
Sbjct: 521 DMELIGIPHRIVVSDRGLAEGNLEYKSRTEAEAQALPVADVLSFLQ 566


>gi|330502208|ref|YP_004379077.1| prolyl-tRNA synthetase [Pseudomonas mendocina NK-01]
 gi|328916494|gb|AEB57325.1| prolyl-tRNA synthetase [Pseudomonas mendocina NK-01]
          Length = 571

 Score =  162 bits (409), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 50/248 (20%), Positives = 96/248 (38%), Gaps = 11/248 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++    H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQFLLSTLKETPSDAVVISHQLMLRAGMIRKLA---SGLYTWLPMGLRVLRKVENVVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P +    LWQ+SG W  Y   +  +K   D     R F + P +    
Sbjct: 60  EMNAAGALEVLMPAIQPAELWQESGRWVQYGPELLRIKDRHD-----REFCVGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+   +  + +R+E      GLMR R F   DA+ F   +    E 
Sbjct: 115 TDLARNELNSYKQLPINFYQIQTKFRDEIRPRF-GLMRGREFLMKDAYSFHADQASLQET 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             ++H    +++   G     V+  T      GS      A++    +  +  +     I
Sbjct: 174 YDRMHQAYCNVFTRLGLNFRPVQADTGSIGGTGSHEFHVLADSGEDDIAFSDSSDYAANI 233

Query: 464 NTGVLLGE 471
                L  
Sbjct: 234 EKAEALPR 241



 Score = 80.6 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 31/177 (17%), Positives = 61/177 (34%), Gaps = 14/177 (7%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
           P  +      I R  + G I Q+        N   +  + +   PV +    +G  + R 
Sbjct: 393 PSPDGQGTLVIKRGIEVGHIFQLGTKYSEAMNCQVLGENGK---PVTLTMGCYGIGVSRV 449

Query: 535 IGIMIENFKGNLPL-W---LSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFR 587
           +   IE       + W   L+P    +  +   T    E   ++   L +    +  D R
Sbjct: 450 VAAAIEQNFDERGIRWNDALAPFHIALVPLRYETEQVREATDKLYAELTAAGFDVLLDDR 509

Query: 588 NET--INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           ++      K  +  +  IP  ++  D+  +E  +  +    T  Q V L + +  L 
Sbjct: 510 DKKTSPGIKFADMELIGIPHRVVVSDRGLAEGKLEYKSRAETEAQAVPLAEILSFLQ 566


>gi|300778952|ref|ZP_07088810.1| proline--tRNA ligase [Chryseobacterium gleum ATCC 35910]
 gi|300504462|gb|EFK35602.1| proline--tRNA ligase [Chryseobacterium gleum ATCC 35910]
          Length = 545

 Score =  162 bits (409), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 81/485 (16%), Positives = 172/485 (35%), Gaps = 83/485 (17%)

Query: 191 TGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLA 250
             +  K      +   +   D+N     + +          ++          + + +L 
Sbjct: 21  YQKCTKIPVKKSIKNRFLFLDNNNVQKLKKFKKIMAKLTSRSEDY-------SKWYNELV 73

Query: 251 REMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QS 308
            + DL   +     ++     G+ I++ +   M +K K+  +     P  + + L++ + 
Sbjct: 74  VKADLAENSGVRGCMVI-KPYGYAIWEKMRDEMDKKFKETGHVNAYFPLFVPKSLFEAEE 132

Query: 309 GHWDSYRANMFAVKCA--------------DDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
            + + +      V                 D   K      ++P +       + + ++S
Sbjct: 133 KNAEGFAKECAVVTHYRLKTDPDNPSKLIVDPDAKLEEELIVRPTSEAIIWNTYKNWIQS 192

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIIS 413
           YR+LP+ + ++ +V R E        +R   F   + H    TKE+   E  K++ +   
Sbjct: 193 YRDLPILINQWANVVRWEMR--TRLFLRTAEFLWQEGHTAHATKEEAVEEAEKMNKVYAD 250

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
             ++F    ++  L T  E+  G+D  +                                
Sbjct: 251 FAENFMAIPVIQGLKTPSERFAGADETY-------------------------------- 278

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
                 E +++D  G+  Q GT   +  N    F+  + N   +  H        +G+  
Sbjct: 279 ----CIEALMQD--GKALQAGTSHFLGQNFAKAFDVKFTNKEGKIEHAWA---TSWGTST 329

Query: 533 RFIGIMI----ENFKGNLPLWLSPIQAIVTTIT------SSAVEYAQEIANLLKSHHLSI 582
           R +G +I    ++F   LP  L+PIQ ++  I           E A +I   L++  +S+
Sbjct: 330 RLMGALIMTHSDDFGLVLPPTLAPIQVVIVPIFKGEEQLEQISEVALDIQAKLRAKGISV 389

Query: 583 ETD-FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA---I 638
           + D        +K  E+ +K +P+ I  G ++   +S+ I R  + T +  S+      I
Sbjct: 390 KFDNDTQNKPGWKFAEYELKGVPVRIAMGPRDLENKSVEIARRDNLTKEVRSIEGLDSYI 449

Query: 639 PILTK 643
             L K
Sbjct: 450 EDLLK 454


>gi|256269239|gb|EEU04564.1| YHR020W-like protein [Saccharomyces cerevisiae JAY291]
          Length = 688

 Score =  162 bits (409), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 82/407 (20%), Positives = 145/407 (35%), Gaps = 61/407 (14%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ-VLDQHLWQQSGHWDSYRAN 317
            D SG        + I++ +  +   KIK    +    P  V  + L ++  H + +   
Sbjct: 212 YDVSGCYILRPPSYTIWENIQKWFDDKIKAIGVQNAYFPMFVSSRVLEKEKDHVEGFAPE 271

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           +  V  A  +  +    A++P +       +   ++SYR+LP++L ++ SV R E     
Sbjct: 272 VAWVTRAGSSELE-EPIAIRPTSETVMYPYYAKWVQSYRDLPLKLNQWNSVVRWEFK-HP 329

Query: 378 HGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
              +R R F   + H    T +    E L+I +    +Y++     ++    T  EK  G
Sbjct: 330 QPFLRTREFLWQEGHTAHLTAKDAEEEVLQILDFYAGVYEELLAVPVVKGRKTEKEKFAG 389

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
            D                                EG  Y P          GR  Q  T 
Sbjct: 390 GDFTTTC---------------------------EG--YIP--------QTGRGIQGATS 412

Query: 497 -QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI-- 553
             +  N    FN    N        +  ++  +G   R IG+M+     N  L + P   
Sbjct: 413 HHLGQNFSKMFNLSVENPLGSDHPKIFAYQNSWGLSTRVIGVMVMIHSDNKGLVIPPRVS 472

Query: 554 --QAIVTTIT----------SSAVEYAQEIANLLKSHHLSIETDF-RNETINYKIREHSI 600
             Q++V  +               E A+ + + LK   +    D+  N T  +K  ++ +
Sbjct: 473 QFQSVVIPVGITKKTSEEQRKHIQETARSVESRLKKVGIRAFGDYNDNYTPGWKFSQYEL 532

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA---IPILTKE 644
           K IPI I  G K+  +  + + R   +    VS  +    IP + +E
Sbjct: 533 KGIPIRIELGPKDIEKNQVVVVRRNDSKKYVVSFDELEARIPEILEE 579


>gi|66044647|ref|YP_234488.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. syringae B728a]
 gi|81308436|sp|Q4ZWM2|SYP_PSEU2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|63255354|gb|AAY36450.1| Prolyl-tRNA synthetase, bacterial [Pseudomonas syringae pv.
           syringae B728a]
          Length = 571

 Score =  162 bits (409), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 49/248 (19%), Positives = 96/248 (38%), Gaps = 11/248 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L        ++    H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQFLLATQKETPSDAVVVSHQLMLRAGMIRKLA---SGLYTWLPMGLRVLRKVEAIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      EI  P +    LWQ+SG W+ Y   +  +       +  R F L P +    
Sbjct: 60  EMDAAGALEILMPGIQPAELWQESGRWEQYGPELMRLVD-----RHNREFCLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+ + +  + +R+E      GLMR R F   DA+ F    +     
Sbjct: 115 TDLARNELNSYKQLPINMYQIQTKFRDEIRPRF-GLMRGREFVMKDAYSFHADHESLQVT 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             ++H    +I+   G +   V+         GS      AE+    ++ +  +     I
Sbjct: 174 YDRMHLAYSNIFTRLGLKFRPVEADNGSIGGAGSHEFHVLAESGEDDIVFSDGSDYAANI 233

Query: 464 NTGVLLGE 471
                +  
Sbjct: 234 EKAEAIPR 241



 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 64/167 (38%), Gaps = 14/167 (8%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           I R  + G I Q+            +  + +   PV +    +G  + R +   IE N  
Sbjct: 403 IKRGIEVGHIFQLGTKYSEAMKCQVLGENGK---PVNLAMGCYGIGVSRVVAAAIEQNSD 459

Query: 544 GNLPLW---LSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNET--INYKI 595
            N  +W   L+P Q  +  +   T +  E   ++   L +    +  D R++      K 
Sbjct: 460 ENGIIWNDTLAPFQIALVPLRYETDAVREATDKLYADLTAAGFEVLLDDRDKKTSPGIKF 519

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +  +  IP  I+  D+  +E ++  +    +  Q +++ D +  + 
Sbjct: 520 ADMELIGIPHRIVVSDRGLAEGNLEYKSRTESQPQAIAVADVLSFIQ 566


>gi|315639668|ref|ZP_07894808.1| proline--tRNA ligase [Enterococcus italicus DSM 15952]
 gi|315484629|gb|EFU75085.1| proline--tRNA ligase [Enterococcus italicus DSM 15952]
          Length = 478

 Score =  162 bits (409), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 63/425 (14%), Positives = 146/425 (34%), Gaps = 59/425 (13%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINT 296
                 + + +  ++ +L   +     +  +   G+++++ +     + +K         
Sbjct: 4   QTNDFTQWYLQTVQQAELMSYSPVRGSI-IFRPDGFELWEHIQEEFNKFLKTQGIRNAYF 62

Query: 297 PQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P ++ +  + +++ H + +   +  V    D  K     AL+P +     + F+  + SY
Sbjct: 63  PMLIPKSFFMKEADHIEGFAPELPWVTEVGDE-KLEEPLALRPTSETMIGSAFSDWIHSY 121

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF-NECLKIHNLIISI 414
           R+LP  + ++ +V+R E        +R   F   + H     E+      + I +    +
Sbjct: 122 RDLPYEINQWANVFRWEKK--TLPFLRTSEFLWQEGHTAHADEEDARRRTMSILDEYARL 179

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            ++F    +     T  E+  G                                    A 
Sbjct: 180 CEEFLAIPVYKGQKTPSERFAG------------------------------------AV 203

Query: 475 YGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
                E ++KD  G+  Q GT           F+  Y+   ++    V  H   +G   R
Sbjct: 204 DTYSIEAMMKD--GKAVQAGTSHYMGTKFAEAFDITYLTKENK---HVAAHTTSWGVSTR 258

Query: 534 FIGIMIENFKGN----LPLWLSPIQAIVTTI-----TSSAVEYAQEIANLLKSHHLSIET 584
            +G +I           P  ++P Q ++  +       + +E   +I   LK+  + +  
Sbjct: 259 LLGSLIMTHGDENGLVFPPTVAPTQVVLLPVGPWKKNPAILEKLDKIFQELKAKGIRVRL 318

Query: 585 DFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           D    +  YK  E  +K   I I CG ++     +  +         V+  + +  + ++
Sbjct: 319 DDSENSPGYKFHEWELKGACIRIECGPRDLENGHVMAKVRDVDGKVTVAFDELLAYIDEQ 378

Query: 645 -SLPP 648
            ++ P
Sbjct: 379 LAIMP 383


>gi|229496735|ref|ZP_04390446.1| prolyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406]
 gi|229316281|gb|EEN82203.1| prolyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406]
          Length = 517

 Score =  162 bits (409), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 75/437 (17%), Positives = 167/437 (38%), Gaps = 75/437 (17%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
             E+  + ++ L  + DL   +     ++     G+ I++ + + + ++ K+  +     
Sbjct: 35  RSENYSQWYQDLVTKADLAENSAVRGCMVI-KPYGYAIWEKMQAELDKRFKETGHVNAYF 93

Query: 297 PQVLDQH-LWQQSGHWDSYRANMFAVKCA-------------DDTIKDLRTFALKPMNCP 342
           P  + +  L +++ H + +      V                D   K      ++P +  
Sbjct: 94  PLFIPKSYLSREADHVEGFAKECAVVTHYRLKNSPDGSGVVVDPEAKLEEELIVRPTSET 153

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMF 401
              + + + ++SYR+LPV   ++ +V R E        +R   F   + H    T+E+  
Sbjct: 154 IIWSTYKNWIQSYRDLPVLCNQWANVVRWEMR--TRLFLRTAEFLWQEGHTAHATREEAV 211

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E  K+      +Y DF                         AE ++             
Sbjct: 212 AEAEKML----EVYGDF-------------------------AEKVLA-------VPVIR 235

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHP 520
            + +      GA      E +++D  G+  Q GT   +  N    F+ +++N   ++   
Sbjct: 236 GVKSETERFAGAVDTYTIEALMQD--GKALQSGTSHFLGQNFAKAFDVYFLNKEGQRE-- 291

Query: 521 VMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI--TSSAV----EYAQE 570
            ++    +G   R +G +I    ++    LP  L+PIQ ++  I  T   +    E  + 
Sbjct: 292 -LVWATSWGVSTRLMGALIMSHSDDNGLVLPPSLAPIQVVIVPIYKTEEHLATIRERVEP 350

Query: 571 IANLLKSHHLSIETDF-RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           +   L++  +S++ D   N+   +K  E+ +K IP+ +  G ++  + ++ + R  + T 
Sbjct: 351 LIKDLRARGISVKLDDNDNKKPGWKFAEYELKGIPVRLALGARDLEQGTVEVARRDTLTK 410

Query: 630 QKVSLL---DAIPILTK 643
           + V+     D I  L +
Sbjct: 411 ETVAFEGIADHIESLLQ 427


>gi|119613716|gb|EAW93310.1| glutamyl-prolyl-tRNA synthetase, isoform CRA_b [Homo sapiens]
          Length = 1522

 Score =  162 bits (409), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 76/445 (17%), Positives = 150/445 (33%), Gaps = 62/445 (13%)

Query: 226  NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
              +Q         EE+    + ++  + ++     D SG        + I++ +  +   
Sbjct: 1018 PKKQTRLGLEAKKEENLADWYSQVITKSEMIEYH-DISGCYILRPWAYAIWEAIKDFFDA 1076

Query: 286  KIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPG 343
            +IK    E    P  + Q   + +  H   +   +  V  +  T       A++P +   
Sbjct: 1077 EIKKLGVENCYFPMFVSQSALEKEKTHVADFAPEVAWVTRSGKTEL-AEPIAIRPTSETV 1135

Query: 344  HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFN 402
                +   ++S+R+LP++L ++ +V R E        +R R F   + H  F T E+   
Sbjct: 1136 MYPAYAKWVQSHRDLPIKLNQWCNVVRWEFKHP-QPFLRTREFLWQEGHSAFATMEEAAE 1194

Query: 403  ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
            E L+I +L   +Y++     ++    T  EK  G D                        
Sbjct: 1195 EVLQILDLYAQVYEELLAIPVVKGRKTEKEKFAGGD------------------------ 1230

Query: 463  INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
                        Y    E     A GR  Q GT        S+                 
Sbjct: 1231 ------------YTTTIE-AFISASGRAIQGGTSHHLGQNFSKMFEIVFEDPKIPGEKQF 1277

Query: 523  IHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTT----------ITSSAVEYA 568
             ++  +G   R IG+M      N+ L L P    +Q ++               + +   
Sbjct: 1278 AYQNSWGLTTRTIGVMTMVHGDNMGLVLPPRVACVQVVIIPCGITNALSEEDKEALIAKC 1337

Query: 569  QEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERS-IGIRRFGS 626
             +    L S ++ +  D R+  +  +K     +K +PI +  G ++      + +R   +
Sbjct: 1338 NDYRRRLLSVNIRVRADLRDNYSPGWKFNHWELKGVPIRLEVGPRDMKSCQFVAVR-RDT 1396

Query: 627  TTTQKVSLLDAIPILTKESLPPDCQ 651
                 V+  +A   L  +++  D Q
Sbjct: 1397 GEKLTVAENEAETKL--QAILEDIQ 1419


>gi|62241042|ref|NP_004437.2| bifunctional aminoacyl-tRNA synthetase [Homo sapiens]
 gi|288558855|sp|P07814|SYEP_HUMAN RecName: Full=Bifunctional aminoacyl-tRNA synthetase; AltName:
            Full=Cell proliferation-inducing gene 32 protein;
            Includes: RecName: Full=Glutamyl-tRNA synthetase;
            AltName: Full=Glutamate--tRNA ligase; Short=GluRS;
            Includes: RecName: Full=Prolyl-tRNA synthetase; AltName:
            Full=Proline--tRNA ligase
 gi|116496781|gb|AAI26276.1| EPRS protein [Homo sapiens]
 gi|223460490|gb|AAI36466.1| Glutamyl-prolyl-tRNA synthetase [Homo sapiens]
          Length = 1512

 Score =  162 bits (409), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 76/445 (17%), Positives = 150/445 (33%), Gaps = 62/445 (13%)

Query: 226  NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
              +Q         EE+    + ++  + ++     D SG        + I++ +  +   
Sbjct: 1008 PKKQTRLGLEAKKEENLADWYSQVITKSEMIEYH-DISGCYILRPWAYAIWEAIKDFFDA 1066

Query: 286  KIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPG 343
            +IK    E    P  + Q   + +  H   +   +  V  +  T       A++P +   
Sbjct: 1067 EIKKLGVENCYFPMFVSQSALEKEKTHVADFAPEVAWVTRSGKTEL-AEPIAIRPTSETV 1125

Query: 344  HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFN 402
                +   ++S+R+LP++L ++ +V R E        +R R F   + H  F T E+   
Sbjct: 1126 MYPAYAKWVQSHRDLPIKLNQWCNVVRWEFKHP-QPFLRTREFLWQEGHSAFATMEEAAE 1184

Query: 403  ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
            E L+I +L   +Y++     ++    T  EK  G D                        
Sbjct: 1185 EVLQILDLYAQVYEELLAIPVVKGRKTEKEKFAGGD------------------------ 1220

Query: 463  INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
                        Y    E     A GR  Q GT        S+                 
Sbjct: 1221 ------------YTTTIE-AFISASGRAIQGGTSHHLGQNFSKMFEIVFEDPKIPGEKQF 1267

Query: 523  IHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTT----------ITSSAVEYA 568
             ++  +G   R IG+M      N+ L L P    +Q ++               + +   
Sbjct: 1268 AYQNSWGLTTRTIGVMTMVHGDNMGLVLPPRVACVQVVIIPCGITNALSEEDKEALIAKC 1327

Query: 569  QEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERS-IGIRRFGS 626
             +    L S ++ +  D R+  +  +K     +K +PI +  G ++      + +R   +
Sbjct: 1328 NDYRRRLLSVNIRVRADLRDNYSPGWKFNHWELKGVPIRLEVGPRDMKSCQFVAVR-RDT 1386

Query: 627  TTTQKVSLLDAIPILTKESLPPDCQ 651
                 V+  +A   L  +++  D Q
Sbjct: 1387 GEKLTVAENEAETKL--QAILEDIQ 1409


>gi|116048881|ref|YP_792318.1| prolyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|313105843|ref|ZP_07792106.1| prolyl-tRNA synthetase [Pseudomonas aeruginosa 39016]
 gi|122257988|sp|Q02IB8|SYP_PSEAB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|115584102|gb|ABJ10117.1| prolyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|310878608|gb|EFQ37202.1| prolyl-tRNA synthetase [Pseudomonas aeruginosa 39016]
          Length = 571

 Score =  162 bits (409), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 65/330 (19%), Positives = 118/330 (35%), Gaps = 19/330 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++    H+ L R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTLKETPADAVVISHQLLLRAGMIRRLA---SGLYTWLPMGLRVLRKVETIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LWQ+SG W+ Y   +  +K      +  R F + P +    
Sbjct: 60  EMNAAGALEVLMPAVQPAELWQESGRWEQYGPELLRLKD-----RHEREFCVGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+   +  + +R+E      GLMR R F   DA+ F   +    + 
Sbjct: 115 TDLARNELNSYKQLPINFYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSFHLSQDSLQQT 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   G +   V+         GS      A +    ++ +  +     I
Sbjct: 174 YDGMYQAYSKIFSRLGLDFRPVQADNGSIGGSGSHEFHVLANSGEDDIVFSDSSDYAANI 233

Query: 464 NTGVL-LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
                   E A      +  L D          +   F LP       +  H  +    +
Sbjct: 234 EKAEAVPRESARGSATEDMRLVDT-PNTKTITALVDGFQLPIEKTIKTLVVHGAEEG-TL 291

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
           +   V G  E     + E    N PL  SP
Sbjct: 292 VALIVRGDHE-----LNEIKAANQPLVASP 316



 Score = 79.1 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 28/169 (16%), Positives = 62/169 (36%), Gaps = 14/169 (8%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFK 543
            I R  + G I Q+            ++   +   PV +    +G  + R +   IE   
Sbjct: 402 VIKRGIEVGHIFQLGTKYSEAMKLNVLSEQGK---PVNLIMGCYGIGVSRVVAAAIEQNH 458

Query: 544 GN----LPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNET--INYK 594
                  P  L+P Q  +  +   T S  +   ++   L +    +  D R++      K
Sbjct: 459 DERGILWPSALAPFQIALVPLKYETESVKQATDKLYAELTAAGFEVLLDDRDKKTSPGVK 518

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             +  +  IP  I+  D+  +E  +  +    + +Q + + + +  +T+
Sbjct: 519 FADMELIGIPHRIVISDRGLNEGVLEYKGRRDSESQNLPIGELMSFITE 567


>gi|167045283|gb|ABZ09941.1| putative anticodon binding domain protein [uncultured marine
           crenarchaeote HF4000_APKG9P22]
          Length = 479

 Score =  162 bits (409), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 77/421 (18%), Positives = 163/421 (38%), Gaps = 59/421 (14%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQ 298
            ++    + ++  + +L   A     ++     G+ I++++   + +K+K+         
Sbjct: 12  NDNFSEWYTQVVIKTELVDYAPVKGLIVL-RPDGYSIWESIKESLDKKLKETGHRNGFLP 70

Query: 299 VLDQHLW--QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           VL       ++  H++     +F V  + ++    R  AL+P +     ++F+  ++S+R
Sbjct: 71  VLIPESLLAKEKEHFEGLNPEVFWVTQSGNSEIGDR-LALRPTSETLAYSLFSKWIRSWR 129

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIY 415
           +LP+++  + S  R E  G     +R   F   + H    TK++   E   I  L     
Sbjct: 130 DLPLKMNFWNSALRAEIKG-TKPFLRTSEFLWQEGHTVHATKDEAEKEVADILELYKKTI 188

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                                        E  +   + T K S +D+         GA Y
Sbjct: 189 -----------------------------EEELAVPVITGKKSEKDKF-------VGAVY 212

Query: 476 GPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
               E ++ D  G+  Q GT   +  N    F+  Y++ ++ +       +  +G   R 
Sbjct: 213 TDTLESLMPD--GKALQMGTSHFLGQNFSKPFDVKYLDENNVE---TFAWQTSWGVSWRL 267

Query: 535 IGIMIENFKGNLPLWL----SPIQAIVTTIT------SSAVEYAQEIANLLKSHHLSIET 584
           IG MI     +  L L    +PIQ ++  I        + ++ A +I + L ++ + +  
Sbjct: 268 IGGMIMIHGDDKGLVLPPKVAPIQVVIIPIYYSNDEKENVLQTACQIKDSLSNNDIRVHL 327

Query: 585 DFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           D R + T  +K  +  ++ IPI I  G K+ ++    + R  + T   + +      ++ 
Sbjct: 328 DDREQLTPGFKFNDWEMRGIPIRIEIGPKDIAKNQAVLVRRHTQTKTSIEMDSLTEKISS 387

Query: 644 E 644
           E
Sbjct: 388 E 388


>gi|161784299|sp|Q8CGC7|SYEP_MOUSE RecName: Full=Bifunctional aminoacyl-tRNA synthetase; Includes:
            RecName: Full=Glutamyl-tRNA synthetase; AltName:
            Full=Glutamate--tRNA ligase; Short=GluRS; Includes:
            RecName: Full=Prolyl-tRNA synthetase; AltName:
            Full=Proline--tRNA ligase; Short=ProRS
          Length = 1512

 Score =  162 bits (409), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 74/437 (16%), Positives = 146/437 (33%), Gaps = 60/437 (13%)

Query: 226  NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
              +Q         EE+    + ++  + ++     D SG        + I++++  +   
Sbjct: 1008 PKKQTRLGLEAKKEENLAEWYSQVITKSEMIEY-YDVSGCYILRPWSYSIWESIKDFFDA 1066

Query: 286  KIKD-DYEEINTPQVLD-QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPG 343
            +IK    E    P  +    L ++  H + +   +  V  +  T       A++P +   
Sbjct: 1067 EIKKLGVENCYFPIFVSQAALEKEKNHIEDFAPEVAWVTRSGKTEL-AEPIAIRPTSETV 1125

Query: 344  HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFN 402
                +   ++S+R+L VRL ++ +V R E        +R R F   + H  F T E+  +
Sbjct: 1126 MYPAYAKWVQSHRDLAVRLNQWCNVVRWEFK-HPQPFLRTREFLWQEGHSAFATFEEAAD 1184

Query: 403  ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
            E L+I  L   +Y++     ++    T  EK  G D                        
Sbjct: 1185 EVLQILELYARVYEELLAIPVVRGRKTEKEKFAGGD------------------------ 1220

Query: 463  INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
                        Y    E     A GR  Q  T        S+                 
Sbjct: 1221 ------------YTTTIE-AFISASGRAIQGATSHHLGQNFSKMCEIVFEDPKTPGEKQF 1267

Query: 523  IHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTT----------ITSSAVEYA 568
             ++  +G   R IG+M+     N+ L L P    +Q +V               + +   
Sbjct: 1268 AYQCSWGLTTRTIGVMVMVHGDNMGLVLPPRVASVQVVVIPCGITNALSEEDREALMAKC 1327

Query: 569  QEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERS-IGIRRFGS 626
             E    L   ++ +  D R+  +  +K     +K +P+ +  G ++      + +R   +
Sbjct: 1328 NEYRRRLLGANIRVRVDLRDNYSPGWKFNHWELKGVPVRLEVGPRDMKSCQFVAVR-RDT 1386

Query: 627  TTTQKVSLLDAIPILTK 643
                 ++  +A   L K
Sbjct: 1387 GEKLTIAEKEAEAKLEK 1403


>gi|296390688|ref|ZP_06880163.1| prolyl-tRNA synthetase [Pseudomonas aeruginosa PAb1]
          Length = 571

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 65/330 (19%), Positives = 118/330 (35%), Gaps = 19/330 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++    H+ L R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTLKETPADAVVISHQLLLRAGMIRRLA---SGLYTWLPMGLRVLRKVETIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LWQ+SG W+ Y   +  +K      +  R F + P +    
Sbjct: 60  EMNAAGALEVLMPAVQPAELWQESGRWEQYGPELLRLKD-----RHEREFCVGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+   +  + +R+E      GLMR R F   DA+ F   +    + 
Sbjct: 115 TDLARNELNSYKQLPINFYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSFHLSQDSLQQT 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   G +   V+         GS      A +    ++ +  +     I
Sbjct: 174 YDGMYQAYSKIFSRLGLDFRPVQADNGSIGGSGSHEFHVLANSGEDDIVFSDSSDYAANI 233

Query: 464 NTGVL-LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
                   E A      +  L D          +   F LP       +  H  +    +
Sbjct: 234 EKAEAVPRESARGSATEDMRLVDT-PNTKTIAALVDGFQLPIEKTIKTLVVHGAEEG-TL 291

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
           +   V G  E     + E    N PL  SP
Sbjct: 292 VALIVRGDHE-----LNEIKAANQPLVASP 316



 Score = 79.1 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 28/169 (16%), Positives = 62/169 (36%), Gaps = 14/169 (8%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFK 543
            I R  + G I Q+            ++   +   PV +    +G  + R +   IE   
Sbjct: 402 VIKRGIEVGHIFQLGTKYSEAMKLNVLSEQGK---PVNLIMGCYGIGVSRVVAAAIEQNH 458

Query: 544 GN----LPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNET--INYK 594
                  P  L+P Q  +  +   T S  +   ++   L +    +  D R++      K
Sbjct: 459 DERGILWPSALAPFQIALVPLKYETESVKQATDKLYAELTAAGFEVLLDDRDKKTSPGVK 518

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             +  +  IP  I+  D+  +E  +  +    + +Q + + + +  +T+
Sbjct: 519 FADMELIGIPHRIVISDRGLNEGVLEYKGRRDSESQNLPIGELMSFITE 567


>gi|150007636|ref|YP_001302379.1| prolyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503]
 gi|262381848|ref|ZP_06074986.1| prolyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
 gi|301310397|ref|ZP_07216336.1| proline--tRNA ligase [Bacteroides sp. 20_3]
 gi|166980137|sp|A6LAP3|SYP_PARD8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|149936060|gb|ABR42757.1| prolyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503]
 gi|262297025|gb|EEY84955.1| prolyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
 gi|300831971|gb|EFK62602.1| proline--tRNA ligase [Bacteroides sp. 20_3]
          Length = 493

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 69/438 (15%), Positives = 157/438 (35%), Gaps = 75/438 (17%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
              +  + ++ L  + DL   +     ++     G+ I++ +   +    K+  +     
Sbjct: 11  RSVNYSQWYQDLVIKADLAENSAVRGCMVI-KPYGYAIWEKMQRILDDMFKETGHVNAYF 69

Query: 297 PQVLDQHLW-QQSGHWDSYRANMFAVKCA-------------DDTIKDLRTFALKPMNCP 342
           P ++ +    +++ H + +      V                D   K      ++P +  
Sbjct: 70  PLLIPKSFLSKEAEHVEGFAKECAVVTHYRLKTNHDGTGVVVDPAAKLEEELIIRPTSET 129

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMF 401
                + + ++SYR+LP+   ++ +V R E        +R   F   + H    T+E+  
Sbjct: 130 IIWNTYRNWIQSYRDLPILCNQWANVMRWEMR--TRLFLRTAEFLWQEGHTAHATREEAE 187

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E  K+      +Y +F                                  + +      
Sbjct: 188 IEAKKM----QDVYANF--------------------------------AENYMAMPVIK 211

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHP 520
            + +      GA      E +++D  G+  Q GT   +  N    F+  +++ + +  + 
Sbjct: 212 GVKSESERFAGALDTYTIEAMMQD--GKALQAGTSHFLGQNFGKAFDVTFIDKNGKSDYA 269

Query: 521 VMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAV------EYAQE 570
                  +G   R IG +I    ++    LP  L+PIQ ++  I  SA       E    
Sbjct: 270 WA---TSWGVSTRLIGALIMSHSDDNGLVLPPHLAPIQVVIVPIYRSAEQLTQISEKVAG 326

Query: 571 IANLLKSHHLSIETDF-RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           I   LK+  +S++ D   N+   +K  E+ +K +P+ +  G ++    +I + R  +   
Sbjct: 327 IVAKLKALGISVKYDDADNKKPGWKFAEYELKGVPVRLAMGGRDLENNTIEVMRRDTLEK 386

Query: 630 QKVS---LLDAIPILTKE 644
           + ++   + + +  L +E
Sbjct: 387 ETITCDGIEEYVKNLLEE 404


>gi|15596153|ref|NP_249647.1| prolyl-tRNA synthetase [Pseudomonas aeruginosa PAO1]
 gi|107100413|ref|ZP_01364331.1| hypothetical protein PaerPA_01001438 [Pseudomonas aeruginosa PACS2]
 gi|218893073|ref|YP_002441942.1| prolyl-tRNA synthetase [Pseudomonas aeruginosa LESB58]
 gi|81857350|sp|Q9I502|SYP_PSEAE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226701320|sp|B7UXX6|SYP_PSEA8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|9946862|gb|AAG04345.1|AE004529_11 prolyl-tRNA synthetase [Pseudomonas aeruginosa PAO1]
 gi|218773301|emb|CAW29113.1| prolyl-tRNA synthetase [Pseudomonas aeruginosa LESB58]
          Length = 571

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 65/330 (19%), Positives = 118/330 (35%), Gaps = 19/330 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++    H+ L R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTLKETPADAVVISHQLLLRAGMIRRLA---SGLYTWLPMGLRVLRKVETIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LWQ+SG W+ Y   +  +K      +  R F + P +    
Sbjct: 60  EMNAAGALEVLMPAVQPAELWQESGRWEQYGPELLRLKD-----RHEREFCVGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+   +  + +R+E      GLMR R F   DA+ F   +    + 
Sbjct: 115 TDLARNELNSYKQLPINFYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSFHLSQDSLQQT 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   G +   V+         GS      A +    ++ +  +     I
Sbjct: 174 YDGMYQAYSKIFSRLGLDFRPVQADNGSIGGSGSHEFHVLANSGEDDIVFSDSSDYAANI 233

Query: 464 NTGVL-LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
                   E A      +  L D          +   F LP       +  H  +    +
Sbjct: 234 EKAEAVPRESARGSATEDMRLVDT-PNTKTIAALVDGFQLPIEKTIKTLVVHGAEEG-TL 291

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
           +   V G  E     + E    N PL  SP
Sbjct: 292 VALIVRGDHE-----LNEIKAANQPLVASP 316



 Score = 79.1 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 62/169 (36%), Gaps = 14/169 (8%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFK 543
            I R  + G I Q+            ++   +   PV +    +G  + R +   IE   
Sbjct: 402 VIKRGIEVGHIFQLGTKYSEAMKLSVLSEQGK---PVNLIMGCYGIGVSRVVAAAIEQNH 458

Query: 544 GN----LPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNET--INYK 594
                  P  L+P Q  +  +   T S  +   ++   L +    +  D R++      K
Sbjct: 459 DERGILWPSALAPFQIALVPLKYETESVKQATDKLYAELTAAGFEVLLDDRDKKTSPGVK 518

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             +  +  IP  I+  D+  SE  +  +    + +Q + + + +  +T+
Sbjct: 519 FADMELIGIPHRIVISDRGLSEGVLEYKGRRDSESQNLPIGELMSFITE 567


>gi|330968902|gb|EGH68968.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 571

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 50/248 (20%), Positives = 96/248 (38%), Gaps = 11/248 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L        ++    H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQFLLATQKETPSDAVVVSHQLMLRAGMIRKLA---SGLYTWLPMGLRVLRKVEAIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      EI  P +    LWQ+SG W+ Y   +  +       +  R F L P +    
Sbjct: 60  EMDAAGALEILMPGIQPAELWQESGRWEQYGPELMRLVD-----RHNREFCLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+ L +  + +R+E      GLMR R F   DA+ F    +     
Sbjct: 115 TDLARNELNSYKQLPINLYQIQTKFRDEIRPRF-GLMRGREFVMKDAYSFHADHESLQVT 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             ++H    +I+   G +   V+         GS      AE+    ++ +  +     I
Sbjct: 174 YDRMHLAYSNIFTRLGLKFRPVEADNGSIGGAGSHEFHVLAESGEDDIVFSDGSDYAANI 233

Query: 464 NTGVLLGE 471
                +  
Sbjct: 234 EKAEAIPR 241



 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 64/167 (38%), Gaps = 14/167 (8%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           I R  + G I Q+            +  + +   PV +    +G  + R +   IE N  
Sbjct: 403 IKRGIEVGHIFQLGTKYSEAMKCQVLGENGK---PVNLAMGCYGIGVSRVVAAAIEQNSD 459

Query: 544 GNLPLW---LSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNET--INYKI 595
            N  +W   L+P Q  +  +   T +  E   ++   L +    +  D R++      K 
Sbjct: 460 ENGIIWNDTLAPFQIALVPLRYETDAVREATDKLYADLTAAGFEVLLDDRDKKTSPGIKF 519

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +  +  IP  I+  D+  +E ++  +    +  Q +++ D +  + 
Sbjct: 520 ADMELIGIPHRIVVSDRGLAEGNLEYKSRTESQPQAIAVADVLSFIQ 566


>gi|330975337|gb|EGH75403.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. aptata str. DSM
           50252]
          Length = 571

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 50/248 (20%), Positives = 96/248 (38%), Gaps = 11/248 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L        ++    H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQFLLATQKETPSDAVVVSHQLMLRAGMIRKLA---SGLYTWLPMGLRVLRKVEAIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      EI  P +    LWQ+SG W+ Y   +  +       +  R F L P +    
Sbjct: 60  EMDAAGALEILMPGIQPAELWQESGRWEQYGPELMRLVD-----RHNREFCLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+ L +  + +R+E      GLMR R F   DA+ F    +     
Sbjct: 115 TDLARNELNSYKQLPINLYQIQTKFRDEIRPRF-GLMRGREFVMKDAYSFHADHESLQVT 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             ++H    +I+   G +   V+         GS      AE+    ++ +  +     I
Sbjct: 174 YDRMHLAYSNIFTRLGLKFRPVEADNGSIGGAGSHEFHVLAESGEDDIVFSDGSDYAANI 233

Query: 464 NTGVLLGE 471
                +  
Sbjct: 234 EKAEAIPR 241



 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 64/167 (38%), Gaps = 14/167 (8%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           I R  + G I Q+            +  + +   PV +    +G  + R +   IE N  
Sbjct: 403 IKRGIEVGHIFQLGTKYSEAMKCQVLGENGK---PVNLAMGCYGIGVSRVVAAAIEQNSD 459

Query: 544 GNLPLW---LSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNET--INYKI 595
            N  +W   L+P Q  +  +   T +  E   ++   L +    +  D R++      K 
Sbjct: 460 ENGIIWNDTLAPFQIALVPLRYETDAVREATDKLYADLTAAGFEVLLDDRDKKTSPGIKF 519

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +  +  IP  I+  D+  +E ++  +    +  Q +++ D +  + 
Sbjct: 520 ADMELIGIPHRIVVSDRGLAEGNLEYKSRTESQPQAIAVADVLSFIQ 566


>gi|119613715|gb|EAW93309.1| glutamyl-prolyl-tRNA synthetase, isoform CRA_a [Homo sapiens]
          Length = 1511

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 76/445 (17%), Positives = 150/445 (33%), Gaps = 62/445 (13%)

Query: 226  NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
              +Q         EE+    + ++  + ++     D SG        + I++ +  +   
Sbjct: 1007 PKKQTRLGLEAKKEENLADWYSQVITKSEMIEYH-DISGCYILRPWAYAIWEAIKDFFDA 1065

Query: 286  KIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPG 343
            +IK    E    P  + Q   + +  H   +   +  V  +  T       A++P +   
Sbjct: 1066 EIKKLGVENCYFPMFVSQSALEKEKTHVADFAPEVAWVTRSGKTEL-AEPIAIRPTSETV 1124

Query: 344  HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFN 402
                +   ++S+R+LP++L ++ +V R E        +R R F   + H  F T E+   
Sbjct: 1125 MYPAYAKWVQSHRDLPIKLNQWCNVVRWEFKHP-QPFLRTREFLWQEGHSAFATMEEAAE 1183

Query: 403  ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
            E L+I +L   +Y++     ++    T  EK  G D                        
Sbjct: 1184 EVLQILDLYAQVYEELLAIPVVKGRKTEKEKFAGGD------------------------ 1219

Query: 463  INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
                        Y    E     A GR  Q GT        S+                 
Sbjct: 1220 ------------YTTTIE-AFISASGRAIQGGTSHHLGQNFSKMFEIVFEDPKIPGEKQF 1266

Query: 523  IHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTT----------ITSSAVEYA 568
             ++  +G   R IG+M      N+ L L P    +Q ++               + +   
Sbjct: 1267 AYQNSWGLTTRTIGVMTMVHGDNMGLVLPPRVACVQVVIIPCGITNALSEEDKEALIAKC 1326

Query: 569  QEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERS-IGIRRFGS 626
             +    L S ++ +  D R+  +  +K     +K +PI +  G ++      + +R   +
Sbjct: 1327 NDYRRRLLSVNIRVRADLRDNYSPGWKFNHWELKGVPIRLEVGPRDMKSCQFVAVR-RDT 1385

Query: 627  TTTQKVSLLDAIPILTKESLPPDCQ 651
                 V+  +A   L  +++  D Q
Sbjct: 1386 GEKLTVAENEAETKL--QAILEDIQ 1408


>gi|325287208|ref|YP_004262998.1| Prolyl-tRNA synthetase [Cellulophaga lytica DSM 7489]
 gi|324322662|gb|ADY30127.1| Prolyl-tRNA synthetase [Cellulophaga lytica DSM 7489]
          Length = 492

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 78/450 (17%), Positives = 161/450 (35%), Gaps = 73/450 (16%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
           +++ L    E   + + +L  + DL   +     ++     G+ I++ + + + R  K+ 
Sbjct: 1   MSKKLTKRAEDYSKWYNELVVKADLAENSAVRGCMVI-KPYGYAIWEKMQAELDRMFKET 59

Query: 290 DYEEINTPQVLDQHLWQ-----------QSGHWDSYRANMFAVKCA----DDTIKDLRTF 334
            +E    P  + + L++           +      YR      K      D   K     
Sbjct: 60  GHENAYFPLFVPKSLFEAEEKNAEGFAKECAVVTHYRLQNDPDKPGKLRVDPNAKLEEEL 119

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
            ++P +       +   ++SYR+LP+ + ++ +V R E        +R   F   + H  
Sbjct: 120 VVRPTSEAIIWNTYKGWIQSYRDLPLLINQWANVVRWEMR--TRLFLRTAEFLWQEGHTA 177

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDT 454
              E    E +     ++ +Y DF                                  D 
Sbjct: 178 HATEN---EAIAEAEQMMDVYADF--------------------------------AEDF 202

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNS 513
           +       + T      GA      E +++D  G+  Q GT   +  N    F+  + + 
Sbjct: 203 MAVPVVKGLKTPSERFAGAVETYCIEALMQD--GKALQAGTSHFLGQNFAKAFDVKFASK 260

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTIT------SS 563
             ++ H   +    +G   R +G +I    ++    LP  L+PIQ ++  I        +
Sbjct: 261 EGKQEH---VWATSWGVSTRLMGALIMTHSDDNGLVLPPKLAPIQVVIVPIYKGDEQLDA 317

Query: 564 AVEYAQEIANLLKSHHLSIETDFRN-ETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
             E    +   L++  +S++ D R+     +K  E+ +K +P+ I  G ++    +  + 
Sbjct: 318 ISEKVNPLVKELRAKGISVKFDNRDTHKPGFKFNEYELKGVPVRIAIGKRDLENGTYEVA 377

Query: 623 RFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           R  +   + V+  D I  +  E L  D QK
Sbjct: 378 RRDTLEKEIVNADDVIGKI--EFLLDDIQK 405


>gi|170290808|ref|YP_001737624.1| prolyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum OPF8]
 gi|170174888|gb|ACB07941.1| prolyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum OPF8]
          Length = 479

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 73/413 (17%), Positives = 159/413 (38%), Gaps = 55/413 (13%)

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
            R   ++  + ++        G+  W   G+++ + ++S M R ++   ++ +  P ++ 
Sbjct: 17  SRWFDEVIFKSEILDERYPVKGMYVWLPYGYELMENIMSIMERLLRQTGHKRVYFPSIVP 76

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           + +  +   +     +                 AL+P +      V +  + SYR+LP+R
Sbjct: 77  ESVLSREFRFIKGFQDSVFWITKLGRQDAPEKLALRPTSEAIMYEVLSRWISSYRDLPIR 136

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGF-TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           + +   +YR E   +   ++RVR      + H F      + E ++  NL + IYK F  
Sbjct: 137 IYQIAPIYRYETK-ATRPMLRVREVAFFKEGHTFHAT---YEEAVEQVNLEVWIYKSFYD 192

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
           E ++  +  +          WD                             GA Y     
Sbjct: 193 ELLVPYIVVKTLP-------WDTF--------------------------PGALYNYDIV 219

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSR-FNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
            I+ D  G+  + G+     +L +R ++  Y++   ++ +   ++   FG  ER +  +I
Sbjct: 220 TIMPD--GKALELGSAINFGDLFARTYDLTYMDEDGQRKN---VNTTSFGISERSLAAVI 274

Query: 540 ----ENFKGNLPLWLSPIQAIVTTI-----TSSAVEYAQEIANLLKSHHLSIETDFRNET 590
               ++    LP  ++PIQ ++  I         +EY++E+ + L+     +  D   E 
Sbjct: 275 AIHGDDRGLRLPPKIAPIQIVIVPIPTKDYEERIMEYSREVKSTLERS-FRVHLDESEER 333

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             YK  +  +K +PI I  G  E   R + + R      + + +      +++
Sbjct: 334 PGYKFYKWEMKGVPIRIEIGRNELERREVTVFRRDKMEREAIPIDKLNERISE 386


>gi|332299347|ref|YP_004441268.1| Prolyl-tRNA synthetase [Porphyromonas asaccharolytica DSM 20707]
 gi|332176410|gb|AEE12100.1| Prolyl-tRNA synthetase [Porphyromonas asaccharolytica DSM 20707]
          Length = 494

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 69/410 (16%), Positives = 148/410 (36%), Gaps = 73/410 (17%)

Query: 270 RKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ-----------HLWQQSGHWDSYR-- 315
             G+ I++ +   + R+ K+  +     P  + +              ++      YR  
Sbjct: 43  PYGYGIWEKMQQDLDRRFKETGHSNAYFPLFIPKSYLSREAEHVEGFAKECAVVTHYRLR 102

Query: 316 -ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
                     D   K      ++P +     + + + ++SYR+LP+   ++ +V R E  
Sbjct: 103 TNEAGDGVEVDPNAKLEEELIVRPTSETIIWSTYKNWIQSYRDLPLLCNQWANVVRWEMR 162

Query: 375 GSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
                 +R   F   + H    T+E+   E  K+      +Y+DF               
Sbjct: 163 --TRLFLRTAEFLWQEGHTAHATQEEAIAEARKMIG----VYEDF--------------- 201

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
                              + +       + +      GA      E +++D  G+  Q 
Sbjct: 202 -----------------AREMLALPVIVGVKSETERFAGAIDTYTIEAMMQD--GKALQS 242

Query: 494 GTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPL 548
           GT   +  N    F+  +++    + +   +    +G   R +G +I    ++    LP 
Sbjct: 243 GTSHFLGQNFAKAFDVTFLDKEGNRDY---VWATSWGVSTRLVGALIMAHSDDNGLVLPP 299

Query: 549 WLSPIQAIVTTITSS------AVEYAQEIANLLKSHHLSIETDF-RNETINYKIREHSIK 601
            ++PIQ ++  I  S        E A +I + L+ H +S++ D   N+   +K  E+ +K
Sbjct: 300 RIAPIQVVIVPIYKSEEELQRIHETADKIVSELRQHGVSVQIDDNDNKKPGWKFAEYEMK 359

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
            +P+ +  G ++    ++ + R  + T + + L      +  E L  D Q
Sbjct: 360 GVPVRLALGMRDLEHGTVEVARRDTLTKETMPLEGISAHI--EQLLEDIQ 407


>gi|57999481|emb|CAI45949.1| hypothetical protein [Homo sapiens]
          Length = 1512

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 76/445 (17%), Positives = 150/445 (33%), Gaps = 62/445 (13%)

Query: 226  NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
              +Q         EE+    + ++  + ++     D SG        + I++ +  +   
Sbjct: 1008 PKKQTRLGLEAKKEENLADWYSQVITKSEMIEYH-DVSGCYILRPWAYAIWEAIKDFFDA 1066

Query: 286  KIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPG 343
            +IK    E    P  + Q   + +  H   +   +  V  +  T       A++P +   
Sbjct: 1067 EIKKLGVENCYFPMFVSQSALEKEKTHVADFAPEVAWVTRSGKTEL-AEPIAIRPTSETV 1125

Query: 344  HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFN 402
                +   ++S+R+LP++L ++ +V R E        +R R F   + H  F T E+   
Sbjct: 1126 MYPAYAKWVQSHRDLPIKLNQWCNVVRWEFKHP-QPFLRTREFLWQEGHSAFVTVEEAAE 1184

Query: 403  ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
            E L+I +L   +Y++     ++    T  EK  G D                        
Sbjct: 1185 EVLQILDLYAQVYEELLAIPVVKGRKTEKEKFAGGD------------------------ 1220

Query: 463  INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
                        Y    E     A GR  Q GT        S+                 
Sbjct: 1221 ------------YTTTIE-AFISASGRAIQGGTSHHLGQNFSKMFEIVFEDPKIPGEKQF 1267

Query: 523  IHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTT----------ITSSAVEYA 568
             ++  +G   R IG+M      N+ L L P    +Q ++               + +   
Sbjct: 1268 AYQNSWGLTTRTIGVMTMVHGDNMGLVLPPRVACVQVVIIPCGITNALSEEDKEALIAKC 1327

Query: 569  QEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERS-IGIRRFGS 626
             +    L S ++ +  D R+  +  +K     +K +PI +  G ++      + +R   +
Sbjct: 1328 NDYRRRLLSVNIRVRADLRDNYSPGWKFNHWELKGVPIRLEVGPRDMKSCQFVAVR-RDT 1386

Query: 627  TTTQKVSLLDAIPILTKESLPPDCQ 651
                 V+  +A   L  +++  D Q
Sbjct: 1387 GEKLTVAENEAETKL--QAILEDIQ 1409


>gi|330950620|gb|EGH50880.1| prolyl-tRNA synthetase [Pseudomonas syringae Cit 7]
          Length = 571

 Score =  161 bits (408), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 50/245 (20%), Positives = 95/245 (38%), Gaps = 11/245 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L        ++    H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQFLLATQKETPSDAVVVSHQLMLRAGMIRKLA---SGLYTWLPMGLRVLRKVEAIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      EI  P +    LWQ+SG W+ Y   +  +       +  R F L P +    
Sbjct: 60  EMDAAGALEILMPGIQPAELWQESGRWEQYGPELMRLVD-----RHNREFCLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+ L +  + +R+E      GLMR R F   DA+ F    +     
Sbjct: 115 TDLARNELNSYKQLPINLYQIQTKFRDEIRPRF-GLMRGREFVMKDAYSFHADHESLQVT 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             ++H    +I+   G +   V+         GS      AE+    ++ +  +     I
Sbjct: 174 YDRMHLAYSNIFTRLGLKFRPVEADNGSIGGAGSHEFHVLAESGEDDIVFSDGSDYAANI 233

Query: 464 NTGVL 468
                
Sbjct: 234 EKAEA 238



 Score = 80.2 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 64/167 (38%), Gaps = 14/167 (8%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           I R  + G I Q+            +  + +   PV +    +G  + R +   IE N  
Sbjct: 403 IKRGIEVGHIFQLGTKYSEAMKCQVLGENGK---PVNLAMGCYGIGVSRVVAAAIEQNSD 459

Query: 544 GNLPLW---LSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNET--INYKI 595
            N  +W   L+P Q  +  +   T +  E   ++   L +    +  D R++      K 
Sbjct: 460 ENGIIWNDTLAPFQIALVPLRYETDAVREATDKLYADLTAAGFEVLLDDRDKKTSPGIKF 519

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +  +  IP  I+  D+  +E ++  +    +  Q +++ D +  + 
Sbjct: 520 ADMELIGIPHRIVVSDRGLAEGNLEYKSRTESQPQAIAVADVLSFIQ 566


>gi|307200437|gb|EFN80646.1| Bifunctional aminoacyl-tRNA synthetase [Harpegnathos saltator]
          Length = 1483

 Score =  161 bits (408), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 94/554 (16%), Positives = 174/554 (31%), Gaps = 73/554 (13%)

Query: 107  DFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIP 166
            D   ++  + D     E+  QEI  +         S  +         +  KV +     
Sbjct: 868  DTKTKRQQNDDNKEITERISQEIQKQGDKVRSLKSSKAE----KSVIDQEVKVLLALKSD 923

Query: 167  AKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWN 226
             K+       G+ +            + K+                N   +     T   
Sbjct: 924  YKDTT-----GQDWKPAMSSDATPKKKKKEEQPKTGKTAKKEVAKENSEAVKDTNKTGTR 978

Query: 227  TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
               E+ +   F        + +   +  +     D SG   +    + +++ +  Y+ R+
Sbjct: 979  LGLEVKKLENF-----SEWYSQAITKSGMIEY-YDVSGCYIFRPWSFMMWKVIKDYIDRE 1032

Query: 287  IKD-DYEEINTPQ-VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
            I     +E   P  V    L ++  H   +   +  V    D+       A++P +    
Sbjct: 1033 ITALGVQECYFPIFVTRAVLEKEKAHIADFAPEVAWVTKCGDSDL-AEPVAIRPTSETVM 1091

Query: 345  VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNE 403
               +   L+S  ELP++L ++ +V R E        +R R F   + H  F TK++   E
Sbjct: 1092 YPAYAKWLRSDTELPLKLNQWNNVVRWEFKDP-KPFLRTREFLWQEGHTAFATKKEAEEE 1150

Query: 404  CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             L I +L   +Y++     ++    T  EK  G D                         
Sbjct: 1151 VLTILDLYSRVYEELLAVPVIKGRKTEKEKFAGGD------------------------- 1185

Query: 464  NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
                       Y    E     A GR  Q  T        S+     V   +E      +
Sbjct: 1186 -----------YTTTVE-AFISASGRAIQGATSHHLGQNFSKMFNIQVEGATESEEKTFV 1233

Query: 524  HRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTT------ITSSAVEY----AQ 569
            ++  +G   R IG+MI    ++    +P  ++PIQA++         T    E      +
Sbjct: 1234 YQNSWGLTTRTIGVMIMVHGDDRGLMVPPMVAPIQAVLIPCGIAASTTMEQKERLNYECE 1293

Query: 570  EIANLLKSHH-LSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGST 627
            ++   L       +  D+RN  T  +K     +K +P+ I  G  E  +  +      + 
Sbjct: 1294 KLRTELLEIGKFRMGVDYRNNRTPGWKFNHWELKGVPVRIELGPAEVEKHQVTFVCRDNL 1353

Query: 628  TTQKVSLLDAIPIL 641
                V     I  L
Sbjct: 1354 ERHTVPRDQVISAL 1367


>gi|289628621|ref|ZP_06461575.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|289651507|ref|ZP_06482850.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str. 2250]
 gi|330868600|gb|EGH03309.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           0893_23]
          Length = 571

 Score =  161 bits (408), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 49/245 (20%), Positives = 94/245 (38%), Gaps = 11/245 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L        ++    H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQFLLATQKETPSDAVVVSHQLMLRAGMIRKLA---SGLYTWLPMGLRVLRKVEAIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      EI  P +    LWQ+SG W+ Y   +  +       +  R F L P +    
Sbjct: 60  EMDAAGALEILMPGIQPAELWQESGRWEQYGPELMRLVD-----RHNREFCLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+ + +  + +R+E      GLMR R F   DA+ F          
Sbjct: 115 TDLARNELNSYKQLPINMYQIQTKFRDEIRPRF-GLMRGREFVMKDAYSFHADHASLQVT 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             ++H    +I+   G +   V+         GS      AE+    ++ +  +     I
Sbjct: 174 YDRMHLAYSNIFTRLGLKFRPVEADNGSIGGAGSHEFHVLAESGEDDIVFSDGSDYAANI 233

Query: 464 NTGVL 468
                
Sbjct: 234 EKAEA 238



 Score = 81.0 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 64/167 (38%), Gaps = 14/167 (8%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           I R  + G I Q+            +  + +   PV +    +G  + R +   IE N  
Sbjct: 403 IKRGIEVGHIFQLGTKYSEAMKCQVLGENGK---PVNLAMGCYGIGVSRVVAAAIEQNSD 459

Query: 544 GNLPLW---LSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNET--INYKI 595
            N  +W   L+P Q  +  +   T +  E   ++   L +    +  D R++      K 
Sbjct: 460 ENGIIWNDTLAPFQIALIPLRYETDAVREATDKLYAELTAAGFEVLLDDRDKKTSPGIKF 519

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +  +  IP  I+  D+  +E ++  +    +  Q +++ D +  + 
Sbjct: 520 ADMELIGIPHRIVVSDRGLAEGNLEYKSRTESQPQAIAVSDVLSFIQ 566


>gi|255081150|ref|XP_002507797.1| bifunctional aminoacyl-tRNA synthetase [Micromonas sp. RCC299]
 gi|226523073|gb|ACO69055.1| bifunctional aminoacyl-tRNA synthetase [Micromonas sp. RCC299]
          Length = 588

 Score =  161 bits (408), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 74/412 (17%), Positives = 147/412 (35%), Gaps = 60/412 (14%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEI--NTPQVLDQHLWQQSGHWDSYRAN 317
            D SG        + +++ +  +  ++IK +  E       V    L  +  H + +   
Sbjct: 127 YDISGCYILRPWAYSMWEQIKDFFDKEIKKEGVENCYFPLFVSSARLEAEKDHIEDFAPE 186

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           +  V  +  +  D+   A++P +      VF + ++S+R+LP++L ++ +V R E     
Sbjct: 187 VAWVTRSGQSELDV-PIAVRPTSETVMYPVFANWIRSHRDLPMKLNQWCNVVRWEFKHPT 245

Query: 378 HGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
              +R R F   + H  F  K     E   I +L   +Y++     ++  + +  EK  G
Sbjct: 246 -PFIRSREFLWQEGHTAFTNKADADKEVRHILDLYRRVYEELLAVPVIPGVKSEKEKFAG 304

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
                                                 Y    E  +  A GR  Q  T 
Sbjct: 305 G------------------------------------LYTTTVEAFVP-ATGRGIQGATS 327

Query: 497 QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL----SP 552
                  ++   F +   ++     M+ +  +G   R IG+ I     N  L L    +P
Sbjct: 328 HCLGQNFAK--MFQIEYENKNGGRSMVWQNSWGCTTRTIGVAIMVHGDNKGLVLPPRVAP 385

Query: 553 IQAIVTTI---------TSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKK 602
           +Q +V TI         +    + A+ +++ +    L  + D R+  T  +K     +K 
Sbjct: 386 LQVVVVTIPNSKLSAEDSKKLNDTAKAMSDGMIDAGLRSKLDDRDNYTPGWKYNHWELKG 445

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK--ESLPPDCQK 652
           +P+    G ++       + R  +   + V L+D      +  E +  D  K
Sbjct: 446 VPLRCEFGPRDMEAGHCVVVRRDTGAKETVKLVDLPVRAKEMCEEMQADMLK 497


>gi|71736091|ref|YP_275923.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|257487021|ref|ZP_05641062.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC 11528]
 gi|298488219|ref|ZP_07006255.1| Prolyl-tRNA synthetase [Pseudomonas savastanoi pv. savastanoi NCPPB
           3335]
 gi|114152230|sp|Q48FB4|SYP_PSE14 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|71556644|gb|AAZ35855.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|298157277|gb|EFH98361.1| Prolyl-tRNA synthetase [Pseudomonas savastanoi pv. savastanoi NCPPB
           3335]
 gi|320323063|gb|EFW79152.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
           B076]
 gi|320329665|gb|EFW85654.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str. race
           4]
 gi|330892229|gb|EGH24890.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. mori str. 301020]
 gi|330988958|gb|EGH87061.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str.
           M301315]
 gi|331009335|gb|EGH89391.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 571

 Score =  161 bits (408), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 49/245 (20%), Positives = 94/245 (38%), Gaps = 11/245 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L        ++    H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQFLLATQKETPSDAVVVSHQLMLRAGMIRKLA---SGLYTWLPMGLRVLRKVEAIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      EI  P +    LWQ+SG W+ Y   +  +       +  R F L P +    
Sbjct: 60  EMDAAGALEILMPGIQPAELWQESGRWEQYGPELMRLVD-----RHNREFCLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+ + +  + +R+E      GLMR R F   DA+ F          
Sbjct: 115 TDLARNELNSYKQLPINMYQIQTKFRDEIRPRF-GLMRGREFVMKDAYSFHADHASLQVT 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             ++H    +I+   G +   V+         GS      AE+    ++ +  +     I
Sbjct: 174 YDRMHLAYSNIFTRLGLKFRPVEADNGSIGGAGSHEFHVLAESGEDDIVFSDGSDYAANI 233

Query: 464 NTGVL 468
                
Sbjct: 234 EKAEA 238



 Score = 81.8 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 64/167 (38%), Gaps = 14/167 (8%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           I R  + G I Q+            +  + +   PV +    +G  + R +   IE N  
Sbjct: 403 IKRGIEVGHIFQLGTKYSEAMKCQVLGENGK---PVNLAMGCYGIGVSRVVAAAIEQNSD 459

Query: 544 GNLPLW---LSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNET--INYKI 595
            N  +W   L+P Q  +  +   T +  E   ++   L +    +  D R++      K 
Sbjct: 460 ENGIIWNDTLAPFQIALIPLRYETDAVREATDKLYAELTAAGFEVLLDDRDKKTSPGIKF 519

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +  +  IP  I+  D+  +E ++  +    +  Q +++ D +  + 
Sbjct: 520 ADMELIGIPHRIVVSDRGLAEGNLEYKSRTESQPQAIAVADVLSFIQ 566


>gi|260590692|ref|ZP_05856150.1| proline--tRNA ligase [Prevotella veroralis F0319]
 gi|260537353|gb|EEX19970.1| proline--tRNA ligase [Prevotella veroralis F0319]
          Length = 493

 Score =  161 bits (408), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 65/438 (14%), Positives = 153/438 (34%), Gaps = 72/438 (16%)

Query: 233 QYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DY 291
           +++    E+  + +  L  + DL   +     ++     G+ I++ + + + +  K+   
Sbjct: 6   KHMTKRAENYSQWYNDLVIKADLAEQSAVRGCMVI-KPYGYAIWEKMQAQLDKMFKETGV 64

Query: 292 EEINTPQVLDQHLW-----------QQSGHWDSYR---ANMFAVKCADDTIKDLRTFALK 337
           +    P ++ +              ++      YR    +       D   K      ++
Sbjct: 65  QNAYFPLLIPKSFLSREAEHVKGFAKECAVVTHYRLKATDNGNAVEVDPNAKLEEELIIR 124

Query: 338 PMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCT 396
           P +       + + + S+R+LP+   ++ +V R E        +R   F   + H    T
Sbjct: 125 PTSETIIWNTYKNWIHSWRDLPLMCNQWCNVMRWEMR--TRPFLRTSEFLWQEGHTAHAT 182

Query: 397 KEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIK 456
           +E+   E   + ++                               D AE  +        
Sbjct: 183 REEAEKEAQTMLHVYA-----------------------------DFAEKWLA------- 206

Query: 457 NSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHS 515
                 + +      GA      E +++D  G+  Q GT   +  N    F+  Y+N  +
Sbjct: 207 VPVVQGVKSETERFAGALDTYTIEAMMQD--GKALQSGTSHFLGQNFAKSFDVTYLNKDN 264

Query: 516 EKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVEY---- 567
           +   P  +    +G   R IG +I    ++    LP  ++PIQ ++  I     +     
Sbjct: 265 K---PEYVWATSWGVSTRLIGALIMTHSDDNGLVLPPKIAPIQVVIVPIFKGEEQLKELT 321

Query: 568 --AQEIANLLKSHHLSIETDF-RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRF 624
              Q + + L+   ++++ D   N+   +K  ++ +K +P+ +  G ++    +I   R 
Sbjct: 322 AKLQPVIDSLRELGITVKYDDTDNKRPGFKFADYELKGVPVRLAMGGRDLENNTIEFMRR 381

Query: 625 GSTTTQKVSLLDAIPILT 642
            +   + VS    +  + 
Sbjct: 382 DTLEKESVSFDGIVERVK 399


>gi|151943962|gb|EDN62255.1| conserved protein [Saccharomyces cerevisiae YJM789]
 gi|190405804|gb|EDV09071.1| hypothetical protein SCRG_04726 [Saccharomyces cerevisiae RM11-1a]
 gi|207344767|gb|EDZ71797.1| YHR020Wp-like protein [Saccharomyces cerevisiae AWRI1631]
 gi|259147048|emb|CAY80303.1| EC1118_1H21_0848p [Saccharomyces cerevisiae EC1118]
 gi|323308880|gb|EGA62116.1| YHR020W-like protein [Saccharomyces cerevisiae FostersO]
 gi|323348347|gb|EGA82595.1| YHR020W-like protein [Saccharomyces cerevisiae Lalvin QA23]
 gi|323354780|gb|EGA86614.1| YHR020W-like protein [Saccharomyces cerevisiae VL3]
          Length = 688

 Score =  161 bits (408), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 80/407 (19%), Positives = 144/407 (35%), Gaps = 61/407 (14%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRAN 317
            D SG        + I++ +  +   KIK    +    P  +   + + +  H + +   
Sbjct: 212 YDVSGCYILRPPSYAIWENIQKWFDDKIKAIGVQNAYFPMFVSSRVLEKEKDHVEGFAPE 271

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           +  V  A  +  +    A++P +       +   ++SYR+LP++L ++ SV R E     
Sbjct: 272 VAWVTRAGSSELE-EPIAIRPTSETVMYPYYAKWVQSYRDLPLKLNQWNSVVRWEFK-HP 329

Query: 378 HGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
              +R R F   + H    T +    E L+I +    +Y++     ++    T  EK  G
Sbjct: 330 QPFLRTREFLWQEGHTAHLTAKDAEEEVLQILDFYAGVYEELLAVPVVKGRKTEKEKFAG 389

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
            D                                EG  Y P          GR  Q  T 
Sbjct: 390 GDFTTTC---------------------------EG--YIP--------QTGRGIQGATS 412

Query: 497 -QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI-- 553
             +  N    FN    N        +  ++  +G   R IG+M+     N  L + P   
Sbjct: 413 HHLGQNFSKMFNLSVENPLGSDHPKIFAYQNSWGLSTRVIGVMVMIHSDNKGLVIPPRVS 472

Query: 554 --QAIVTTIT----------SSAVEYAQEIANLLKSHHLSIETDF-RNETINYKIREHSI 600
             Q++V  +               E A+ + + LK   +    D+  N T  +K  ++ +
Sbjct: 473 QFQSVVIPVGITKKTSEEQRKHIHETARSVESRLKKVGIRAFGDYNDNYTPGWKFSQYEL 532

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA---IPILTKE 644
           K IPI I  G K+  +  + + R   +    VS  +    IP + +E
Sbjct: 533 KGIPIRIELGPKDIEKNQVVVVRRNDSKKYVVSFDELEARIPEILEE 579


>gi|6321808|ref|NP_011884.1| hypothetical protein YHR020W [Saccharomyces cerevisiae S288c]
 gi|731640|sp|P38708|YHI0_YEAST RecName: Full=Putative prolyl-tRNA synthetase YHR020W; AltName:
           Full=Proline--tRNA ligase; Short=ProRS
 gi|500692|gb|AAB68873.1| Yhr020wp [Saccharomyces cerevisiae]
 gi|285809922|tpg|DAA06709.1| TPA: hypothetical protein YHR020W [Saccharomyces cerevisiae S288c]
          Length = 688

 Score =  161 bits (408), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 80/407 (19%), Positives = 144/407 (35%), Gaps = 61/407 (14%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRAN 317
            D SG        + I++ +  +   KIK    +    P  +   + + +  H + +   
Sbjct: 212 YDVSGCYILRPPSYAIWENIQKWFDDKIKAIGVQNAYFPMFVSSRVLEKEKDHVEGFAPE 271

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           +  V  A  +  +    A++P +       +   ++SYR+LP++L ++ SV R E     
Sbjct: 272 VAWVTRAGSSELE-EPIAIRPTSETVMYPYYAKWVQSYRDLPLKLNQWNSVVRWEFK-HP 329

Query: 378 HGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
              +R R F   + H    T +    E L+I +    +Y++     ++    T  EK  G
Sbjct: 330 QPFLRTREFLWQEGHTAHLTAKDAEEEVLQILDFYAGVYEELLAVPVVKGRKTEKEKFAG 389

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
            D                                EG  Y P          GR  Q  T 
Sbjct: 390 GDFTTTC---------------------------EG--YIP--------QTGRGIQGATS 412

Query: 497 -QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI-- 553
             +  N    FN    N        +  ++  +G   R IG+M+     N  L + P   
Sbjct: 413 HHLGQNFSKMFNLSVENPLGSDHPKIFAYQNSWGLSTRVIGVMVMIHSDNKGLVIPPRVS 472

Query: 554 --QAIVTTIT----------SSAVEYAQEIANLLKSHHLSIETDF-RNETINYKIREHSI 600
             Q++V  +               E A+ + + LK   +    D+  N T  +K  ++ +
Sbjct: 473 QFQSVVIPVGITKKTSEEQRKHIHETARSVESRLKKVGIRAFGDYNDNYTPGWKFSQYEL 532

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA---IPILTKE 644
           K IPI I  G K+  +  + + R   +    VS  +    IP + +E
Sbjct: 533 KGIPIRIELGPKDIEKNQVVVVRRNDSKKYVVSFDELEARIPEILEE 579


>gi|294954482|ref|XP_002788190.1| prolyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
 gi|294954484|ref|XP_002788191.1| prolyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
 gi|239903405|gb|EER19986.1| prolyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
 gi|239903406|gb|EER19987.1| prolyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
          Length = 720

 Score =  161 bits (408), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 78/420 (18%), Positives = 143/420 (34%), Gaps = 71/420 (16%)

Query: 256 FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDS 313
           F    D SG          I++ +      +IK         P  + +   + +  H + 
Sbjct: 232 FIRYHDISGCYILRPPVMFIWEQIQQAFDTEIKKLGVRPCCFPMFVSKSALEREKEHVEG 291

Query: 314 YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP 373
           +   +  V  A D+       A++P +       +   ++SYR+LP++L ++ +V R E 
Sbjct: 292 FSPEVAWVTKAGDSELP-EPIAIRPTSETIMYPSYADWIRSYRDLPLKLNQWTNVVRWEF 350

Query: 374 SGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
                  +R R F   + H    TKE+       I +L   +Y+      ++  + +  E
Sbjct: 351 KQPT-PFIRTREFLWQEGHTAHATKEEAVGLVYSILDLYKMLYEQLLAVPVVQGVKSEME 409

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
           K  G +A                                 AF             GR  Q
Sbjct: 410 KFAGGEATTTC----------------------------EAF---------VACNGRAVQ 432

Query: 493 CGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLS 551
             T   +  +    F   + +   EK       +  +G   R IG+MI     +  L L 
Sbjct: 433 GATSHFLGTHFAKMFGIEFEDRDGEKK---FAEQTSWGFTTRSIGVMIMEHGDDKGLVLP 489

Query: 552 P----IQAIVTTI--------------TSSAVEYAQEIANLLKSHHLSIETDFR-NETIN 592
           P    +Q ++  I                   E  + I   LK++ + +  D R ++T  
Sbjct: 490 PRVAEVQVVIVPIPPKGAGAQWSTAELKEMIGEKCKSIYEDLKANGVRVVLDDREDKTPG 549

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIG-IRRFGSTTTQK-----VSLLDAIPILTKESL 646
           YK     +K +P+ I  G K+  +  +  +RR     +Q+     V +  A+  +  E L
Sbjct: 550 YKFNHWELKGVPLRIEVGAKDLEKGVVTFVRRNSGRKSQEAKHASVEVKAALESIQSELL 609


>gi|149373221|ref|ZP_01892041.1| prolyl-tRNA synthetase [unidentified eubacterium SCB49]
 gi|149354255|gb|EDM42826.1| prolyl-tRNA synthetase [unidentified eubacterium SCB49]
          Length = 492

 Score =  161 bits (408), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 69/427 (16%), Positives = 157/427 (36%), Gaps = 73/427 (17%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
            EE   + + +L  + DL   +     ++     G+ I++ + + + +K K+  +     
Sbjct: 8   REEDYSKWYNELVVKADLAENSGVRGCMVI-KPYGFGIWERMQAELDKKFKETGHSNAYF 66

Query: 297 PQVLDQHLWQ-----------QSGHWDSYR----ANMFAVKCADDTIKDLRTFALKPMNC 341
           P  + + +++           +      YR             D   K      ++P + 
Sbjct: 67  PLFVPKSMFEAEEKNAEGFAKECAVVTHYRLKNDDENAGKLIVDPNAKLEEELIVRPTSE 126

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQM 400
               + +   ++SYR+LP+ + ++ +V R E        +R   F   + H    TK++ 
Sbjct: 127 AIIWSTYKGWVQSYRDLPLLINQWANVVRWEMR--TRLFLRTAEFLWQEGHTAHTTKKEA 184

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQ 460
             E  ++ N+     +DF    ++  L T  E+  G++  +                   
Sbjct: 185 IEESERMMNVYADFVQDFMAIPVVKGLKTESERFAGAEETY------------------- 225

Query: 461 DRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCH 519
                              E +++D  G+  Q GT   +  N    F+  +     ++ +
Sbjct: 226 -----------------CIEALMQD--GKALQAGTSHFLGQNFAKAFDVKFATKEGKQEY 266

Query: 520 PVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTIT------SSAVEYAQ 569
              +    +G   R +G ++    ++    LP  L+P Q ++  I        +  E A 
Sbjct: 267 ---VWGTSWGVSTRLMGALVMTHSDDKGLVLPPNLAPDQVVIVPIYRNDEQFDAVSEAAN 323

Query: 570 EIANLLKSHHLSIETDFRN-ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
           E+   L++  + ++ D R+     +K  E+ +K +P+ I  G K+    +  + R  + T
Sbjct: 324 ELMAALRAKGVRVKFDNRDTHKPGWKFNEYELKGVPVRIAIGPKDLENGTFEVARRDTLT 383

Query: 629 TQKVSLL 635
            + +S  
Sbjct: 384 KEVLSKD 390


>gi|323304725|gb|EGA58486.1| YHR020W-like protein [Saccharomyces cerevisiae FostersB]
          Length = 687

 Score =  161 bits (408), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 80/407 (19%), Positives = 144/407 (35%), Gaps = 61/407 (14%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRAN 317
            D SG        + I++ +  +   KIK    +    P  +   + + +  H + +   
Sbjct: 211 YDVSGCYILRPPSYAIWENIQKWFDDKIKAIGVQNAYFPMFVSSRVLEKEKDHVEGFAPE 270

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           +  V  A  +  +    A++P +       +   ++SYR+LP++L ++ SV R E     
Sbjct: 271 VAWVTRAGSSELE-EPIAIRPTSETVMYPYYAKWVQSYRDLPLKLNQWNSVVRWEFK-HP 328

Query: 378 HGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
              +R R F   + H    T +    E L+I +    +Y++     ++    T  EK  G
Sbjct: 329 QPFLRTREFLWQEGHTAHLTAKDAEEEVLQILDFYAGVYEELLAVPVVKGRKTEKEKFAG 388

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
            D                                EG  Y P          GR  Q  T 
Sbjct: 389 GDFTTTC---------------------------EG--YIP--------QTGRGIQGATS 411

Query: 497 -QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI-- 553
             +  N    FN    N        +  ++  +G   R IG+M+     N  L + P   
Sbjct: 412 HHLGQNFSKMFNLSVENPLGSDHPKIFAYQNSWGLSTRVIGVMVMIHSDNKGLVIPPRVS 471

Query: 554 --QAIVTTIT----------SSAVEYAQEIANLLKSHHLSIETDF-RNETINYKIREHSI 600
             Q++V  +               E A+ + + LK   +    D+  N T  +K  ++ +
Sbjct: 472 QFQSVVIPVGITKKTSEEQRKHIHETARSVESRLKKVGIRAFGDYNDNYTPGWKFSQYEL 531

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA---IPILTKE 644
           K IPI I  G K+  +  + + R   +    VS  +    IP + +E
Sbjct: 532 KGIPIRIELGPKDIEKNQVVVVRRNDSKKYVVSFDELEARIPEILEE 578


>gi|114572697|ref|XP_001172414.1| PREDICTED: glutamyl-prolyl tRNA synthetase isoform 6 [Pan
            troglodytes]
          Length = 1519

 Score =  161 bits (408), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 75/445 (16%), Positives = 149/445 (33%), Gaps = 62/445 (13%)

Query: 226  NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
              +Q         EE+    + ++  + ++     D SG        + I++ +  +   
Sbjct: 1015 PKKQTRLGLEAKKEENLADWYSQVITKSEMIEYH-DVSGCYILRPWAYAIWEAIKDFFDA 1073

Query: 286  KIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPG 343
            +IK    E    P  + Q   + +  H   +   +  V  +  T       A++P +   
Sbjct: 1074 EIKKLGVENCYFPMFVSQSALEKEKTHVADFAPEVAWVTRSGKTEL-AEPIAIRPTSETV 1132

Query: 344  HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFN 402
                +   ++S+R+LP++L ++ +V R E        +R R F   + H  F T E+   
Sbjct: 1133 MYPAYAKWVQSHRDLPIKLNQWCNVVRWEFKHP-QPFLRTREFLWQEGHSAFATMEEAAE 1191

Query: 403  ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
            E L+I +L   +Y++     ++    T  EK  G D                        
Sbjct: 1192 EVLQILDLYAQVYEELLAIPVVKGRKTEKEKFAGGD------------------------ 1227

Query: 463  INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
                        Y    E     A GR  Q GT        S+                 
Sbjct: 1228 ------------YTTTIE-AFISASGRAIQGGTSHHLGQNFSKMFEIVFEDPKIPGEKQF 1274

Query: 523  IHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTT----------ITSSAVEYA 568
             ++  +G   R IG+M      N+ L L P    +Q ++               + +   
Sbjct: 1275 AYQNSWGLTTRTIGVMTMVHGDNMGLVLPPRVACVQVVIIPCGITNALSEEDKEALIAKC 1334

Query: 569  QEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERS-IGIRRFGS 626
             +    L   ++ +  D R+  +  +K     +K +PI +  G ++      + +R   +
Sbjct: 1335 NDYRRRLLRVNIRVRADLRDNYSPGWKFNHWELKGVPIRLEVGPRDMKSCQFVAVR-RDT 1393

Query: 627  TTTQKVSLLDAIPILTKESLPPDCQ 651
                 V+  +A   L  +++  D Q
Sbjct: 1394 GEKLTVAENEAETKL--QAILEDIQ 1416


>gi|313243553|emb|CBY42261.1| unnamed protein product [Oikopleura dioica]
          Length = 476

 Score =  161 bits (408), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 76/391 (19%), Positives = 139/391 (35%), Gaps = 56/391 (14%)

Query: 270 RKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD-QHLWQQSGHWDSYRANMFAVKCADDT 327
              + I++ +  +    IKD   E    P  +    L ++  H + +   +  V  + DT
Sbjct: 1   PPSYNIWEHIKDFFDMNIKDLGVENCYFPMFVSQAALEKEKEHIEDFAPEVAWVTRSGDT 60

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
                  A++P +      ++    +S+R+LP+++ ++ +V R E        +R R F 
Sbjct: 61  EL-AEPIAIRPTSETVMYPIYAKRCQSHRDLPIKMNQWCNVVRWEFKHPT-PFLRTREFL 118

Query: 388 QDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
             + H  F TK +   E ++I +L   +Y+D      +    T  EK  G D        
Sbjct: 119 WQEGHSAFATKAEAEVEVMQILDLYRKVYEDLLAIATVPGRKTVKEKFAGGD-------- 170

Query: 447 IMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI-QVDFNLPSR 505
                                       Y    E  +K A GR  Q  T   +  N    
Sbjct: 171 ----------------------------YTTTVEAYIK-AAGRAIQGATSHHLGQNFSKM 201

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTT-- 559
           FN  + +    K      ++  +G   R IG+MI     +  L + P     QA++    
Sbjct: 202 FNISFEDESKGKGIKEFAYQNSWGITTRTIGVMIMVHADDKGLVIPPKVSRYQAVIVPCG 261

Query: 560 ------ITSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDK 612
                   +      + + N LKS  +    D R++    +K  +  +K +P+ I  G K
Sbjct: 262 ATKTDEDKNKLFNACKALENQLKSFGIRAHADLRDDKKPGWKFNDWELKGVPLRIEVGPK 321

Query: 613 EASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +    S    R  +      S +  +P + K
Sbjct: 322 DLEANSAVFVRRDTLEKVTHSGILTVPFIAK 352


>gi|255548247|ref|XP_002515180.1| prolyl-tRNA synthetase, putative [Ricinus communis]
 gi|223545660|gb|EEF47164.1| prolyl-tRNA synthetase, putative [Ricinus communis]
          Length = 501

 Score =  161 bits (408), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 76/400 (19%), Positives = 150/400 (37%), Gaps = 59/400 (14%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTP----QVLDQHLWQQSGHWDSYR 315
            D SG          I++ + ++   +IK    +I        V    L ++  H + + 
Sbjct: 45  YDISGCYILRPWAMSIWEVMQTFFDAEIKK--MKIKNCYFPLFVSSSVLEKEKDHIEGFA 102

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
             +  V  +  +  ++   A++P +       ++  ++ +R+LP++L ++ +V R E S 
Sbjct: 103 PEVAWVTKSGKSDLEI-PIAIRPTSETVMYPYYSKWIRGHRDLPLKLNQWCNVVRWEFSN 161

Query: 376 SLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
                +R R F   + H  F TKE+   E L+I  L   IY++F    ++    +  EK 
Sbjct: 162 PT-PFIRSREFLWQEGHTAFATKEEADEEVLQILELYRCIYEEFLAVPVVKGKKSEREKF 220

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
            G                                      Y    E  + +  GR  Q  
Sbjct: 221 AGG------------------------------------LYTTSVEAFIPNT-GRGIQGA 243

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP-- 552
           T        ++   F +N  +EK    M+ +  +    R IG+M+     +  L L P  
Sbjct: 244 TSHCLGQNFAK--MFEINFENEKGEKGMVWQNSWAYSTRTIGVMVMVHGDDKGLVLPPKV 301

Query: 553 --IQAIVTTI------TSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKI 603
             +Q IV  +      T    +   E  + L    +  E+DFR+  +  +K     +K +
Sbjct: 302 ASVQVIVIPVPYKDADTQGIFDACTETVDALCKVGIRAESDFRDNYSPGWKYSHWEVKGV 361

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           P+ I  G K+ +   +   R  + T + +S ++ +  + +
Sbjct: 362 PLRIEIGPKDLANNQVRTVRRDNATKKDISRVNLVEQVKE 401


>gi|330959255|gb|EGH59515.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. maculicola str.
           ES4326]
          Length = 571

 Score =  161 bits (408), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 50/245 (20%), Positives = 94/245 (38%), Gaps = 11/245 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L        ++    H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQFLLATQKETPSDAVVVSHQLMLRAGMIRKLA---SGLYTWLPMGLRVLRKVEAIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      EI  P +    LWQ+SG W+ Y   +  +       +  R F L P +    
Sbjct: 60  EMDAAGALEILMPGIQPAELWQESGRWEQYGPELMRLVD-----RHNREFCLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+ L +  + +R+E      GLMR R F   DA+ F          
Sbjct: 115 TDLARNELNSYKQLPINLYQIQTKFRDEIRPRF-GLMRGREFVMKDAYSFHADNASLQVT 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             ++H    +I+   G +   V+         GS      AE+    ++ +  +     I
Sbjct: 174 YDRMHLAYSNIFSRLGLKFRPVEADNGSIGGAGSHEFHVLAESGEDDIVFSNGSDYAANI 233

Query: 464 NTGVL 468
                
Sbjct: 234 EKAEA 238



 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 62/167 (37%), Gaps = 14/167 (8%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           I R  + G I Q+            +  + +   PV +    +G  + R +   IE N  
Sbjct: 403 IKRGIEVGHIFQLGTKYSEAMKCQVLGENGK---PVNLAMGCYGIGVSRVVAAAIEQNSD 459

Query: 544 GNLPLW---LSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNET--INYKI 595
            N  +W   L+P Q  +  +   T +  E    +   L      +  D R++      K 
Sbjct: 460 ENGIIWNDTLAPFQIALIPLRYETDAVREATDRLYAELTGAGFEVLLDDRDKKTSPGIKF 519

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +  +  IP  I+  D+  +E ++  +    +  Q +++ D +  + 
Sbjct: 520 ADMELIGIPHRIVVSDRGLAEGNLEYKSRTESQPQAIAVADVLSFIQ 566


>gi|323333338|gb|EGA74735.1| YHR020W-like protein [Saccharomyces cerevisiae AWRI796]
          Length = 674

 Score =  161 bits (408), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 80/407 (19%), Positives = 144/407 (35%), Gaps = 61/407 (14%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRAN 317
            D SG        + I++ +  +   KIK    +    P  +   + + +  H + +   
Sbjct: 212 YDVSGCYILRPPSYAIWENIQKWFDDKIKAIGVQNAYFPMFVSSRVLEKEKDHVEGFAPE 271

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           +  V  A  +  +    A++P +       +   ++SYR+LP++L ++ SV R E     
Sbjct: 272 VAWVTRAGSSELE-EPIAIRPTSETVMYPYYAKWVQSYRDLPLKLNQWNSVVRWEFK-HP 329

Query: 378 HGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
              +R R F   + H    T +    E L+I +    +Y++     ++    T  EK  G
Sbjct: 330 QPFLRTREFLWQEGHTAHLTAKDAEEEVLQILDFYAGVYEELLAVPVVKGRKTEKEKFAG 389

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
            D                                EG  Y P          GR  Q  T 
Sbjct: 390 GDFTTTC---------------------------EG--YIP--------QTGRGIQGATS 412

Query: 497 -QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI-- 553
             +  N    FN    N        +  ++  +G   R IG+M+     N  L + P   
Sbjct: 413 HHLGQNFSKMFNLSVENPLGSDHPKIFAYQNSWGLSTRVIGVMVMIHSDNKGLVIPPRVS 472

Query: 554 --QAIVTTIT----------SSAVEYAQEIANLLKSHHLSIETDF-RNETINYKIREHSI 600
             Q++V  +               E A+ + + LK   +    D+  N T  +K  ++ +
Sbjct: 473 QFQSVVIPVGITKKTSEEQRKHIHETARSVESRLKKVGIRAFGDYNDNYTPGWKFSQYEL 532

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA---IPILTKE 644
           K IPI I  G K+  +  + + R   +    VS  +    IP + +E
Sbjct: 533 KGIPIRIELGPKDIEKNQVVVVRRNDSKKYVVSFDELEARIPEILEE 579


>gi|237800208|ref|ZP_04588669.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331023065|gb|EGI03122.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 571

 Score =  161 bits (408), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 49/245 (20%), Positives = 94/245 (38%), Gaps = 11/245 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L        ++    H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQFLLATQKETPSDAVVVSHQLMLRAGMIRKLA---SGLYTWLPMGLRVLRKVEAIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      EI  P +    LWQ+SG W+ Y   +  +       +  R F L P +    
Sbjct: 60  EMDAAGALEILMPGIQPAELWQESGRWEQYGPELMRLVD-----RHNREFCLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+ + +  + +R+E      GLMR R F   DA+ F          
Sbjct: 115 TDLARNELNSYKQLPINMYQIQTKFRDEIRPRF-GLMRGREFVMKDAYSFHADNASLQVT 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             ++H    +I+   G +   V+         GS      AE+    ++ +  +     I
Sbjct: 174 YDRMHLAYSNIFSRLGLKFRPVEADNGSIGGAGSHEFHVLAESGEDDIVFSNGSDYAANI 233

Query: 464 NTGVL 468
                
Sbjct: 234 EKAEA 238



 Score = 81.4 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 64/167 (38%), Gaps = 14/167 (8%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           I R  + G I Q+            +  + +   PV +    +G  + R +   IE N  
Sbjct: 403 IKRGIEVGHIFQLGTKYSEAMKCQVLGENGK---PVNLAMGCYGIGVSRVVAAAIEQNSD 459

Query: 544 GNLPLW---LSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNET--INYKI 595
            N  +W   L+P Q  +  +   T +  E   ++   L +    +  D R++      K 
Sbjct: 460 ENGIIWNDTLAPFQIALIPLRYETDAVREATDKLYAELTAAGFEVLLDDRDKKTSPGIKF 519

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +  +  IP  ++  D+  +E ++  +    +  Q +++ D +  + 
Sbjct: 520 ADMELIGIPHRVVVSDRGLAEGNLEYKSRTESQPQAIAVADVLSFIQ 566


>gi|167464457|ref|ZP_02329546.1| prolyl-tRNA synthetase [Paenibacillus larvae subsp. larvae
           BRL-230010]
          Length = 424

 Score =  161 bits (408), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 58/366 (15%), Positives = 130/366 (35%), Gaps = 56/366 (15%)

Query: 290 DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
            +     P  + +  + ++  H + +   +  V  A     + R  A++P +      ++
Sbjct: 9   GHRNAYFPLFIPESFFQKEKEHVEGFNPELPWVTEAGGEKLEER-LAVRPTSETMVGHMY 67

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN-ECLKI 407
              + SYR+LP+ + ++ +V R E        +R   F   + H     E     E +++
Sbjct: 68  AEWINSYRDLPLLINQWANVVRWEKR--TLPFLRTSEFLWQEGHTAHEDEADARKETMQM 125

Query: 408 HNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGV 467
             +  +  +D+    ++    T  EK  G                               
Sbjct: 126 LEIYRTFVEDYLAIPVITGQKTPSEKFAG------------------------------- 154

Query: 468 LLGEGAFYGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
                A      E ++KD  G+  Q GT      N    F+  ++N  ++      +H  
Sbjct: 155 -----AIDTYSIEAMMKD--GKAVQAGTSHYLGTNFAEAFDIKFLNRENQ---HEFVHTT 204

Query: 527 VFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTIT-----SSAVEYAQEIANLLKS 577
            +G   R IG MI     +    +P  ++P Q I+  I         +    E+   +K 
Sbjct: 205 SWGVSTRLIGAMIMAHGDDRGLVMPPKVAPTQVIMIPIGPAKTRDQVLAKTYELQTEIKK 264

Query: 578 HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
               +  D R ++  +K  E+ ++ +P+ +  G ++     + +    +   + V+  + 
Sbjct: 265 AGFRVRVDAREQSPGWKFNEYEMRGVPVRVELGPRDMENGQVILVSRVTGEKKVVAQDNL 324

Query: 638 IPILTK 643
           +  +T+
Sbjct: 325 VEEITR 330


>gi|228471025|ref|ZP_04055869.1| prolyl-tRNA synthetase [Porphyromonas uenonis 60-3]
 gi|313885947|ref|ZP_07819685.1| proline--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I]
 gi|228307245|gb|EEK16268.1| prolyl-tRNA synthetase [Porphyromonas uenonis 60-3]
 gi|312924477|gb|EFR35248.1| proline--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I]
          Length = 494

 Score =  161 bits (407), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 69/410 (16%), Positives = 148/410 (36%), Gaps = 73/410 (17%)

Query: 270 RKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ-----------HLWQQSGHWDSYR-- 315
             G+ I++ +   + R+ K+  +     P  + +              ++      YR  
Sbjct: 43  PYGYGIWEKMQQDLDRRFKETGHSNAYFPLFIPKSYLSREAEHVEGFAKECAVVTHYRLR 102

Query: 316 -ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
                     D   K      ++P +     + + + ++SYR+LP+   ++ +V R E  
Sbjct: 103 TNEAGDGVEVDPNAKLEEELIVRPTSETIIWSTYKNWIQSYRDLPLLCNQWANVVRWEMR 162

Query: 375 GSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
                 +R   F   + H    T+E+   E  K+      +Y+DF               
Sbjct: 163 --TRLFLRTAEFLWQEGHTAHATQEEAIAEARKMIG----VYEDF--------------- 201

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
                              + +       + +      GA      E +++D  G+  Q 
Sbjct: 202 -----------------AREMLALPVIVGVKSETERFAGAIDTYTIEAMMQD--GKALQS 242

Query: 494 GTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPL 548
           GT   +  N    F+  +++    + +   +    +G   R +G +I    ++    LP 
Sbjct: 243 GTSHFLGQNFAKAFDVTFLDKEGNRDY---VWATSWGVSTRLVGALIMAHSDDNGLVLPP 299

Query: 549 WLSPIQAIVTTITSS------AVEYAQEIANLLKSHHLSIETDF-RNETINYKIREHSIK 601
            ++PIQ ++  I  S        E A +I + L+ H +S++ D   N+   +K  E+ +K
Sbjct: 300 RIAPIQVVIVPIYKSEEELQRIHETADKIVSELRQHGVSVQIDDNDNKKPGWKFAEYEMK 359

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
            +P+ +  G ++    ++ + R  + T + + L      +  E L  D Q
Sbjct: 360 GVPVRLALGMRDLEHGTVEVARRDTLTKETMPLEGISAHI--EQLLEDIQ 407


>gi|126662081|ref|ZP_01733080.1| prolyl-tRNA synthetase [Flavobacteria bacterium BAL38]
 gi|126625460|gb|EAZ96149.1| prolyl-tRNA synthetase [Flavobacteria bacterium BAL38]
          Length = 492

 Score =  161 bits (407), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 74/451 (16%), Positives = 165/451 (36%), Gaps = 75/451 (16%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
           +++ L    E   + + +L  + DL   +     ++     G+ I++ + + + R  K+ 
Sbjct: 1   MSKNLTTRAEDYSKWYNELVVKADLAENSGVRGCMVI-KPYGYAIWEKMQAELDRMFKET 59

Query: 290 DYEEINTPQVLDQHLWQ-----------QSGHWDSYRANMFAVK----CADDTIKDLRTF 334
            +     P  + + +++           +      YR      K      D   K     
Sbjct: 60  GHSNAYFPLFVPKSMFEAEEKNAEGFAKECAIVTHYRLKNDPEKPGKLMVDPNAKLEEEL 119

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV- 393
            ++P +     + +   ++SYR+LP+ + ++ +V R E        +R   F   + H  
Sbjct: 120 IVRPTSEAIIWSTYKGWVQSYRDLPLLINQWANVVRWEMR--TRLFLRTAEFLWQEGHTA 177

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
             T+++   E  K+ N+     ++F    ++  L T  E+  G+D  +            
Sbjct: 178 HATRQEAIEESEKMMNVYADFAQNFMAIPVIKGLKTETERFAGADETY------------ 225

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVN 512
                                     E +++D  G+  Q GT   +  N    F+  + N
Sbjct: 226 ------------------------CIEALMQD--GKALQAGTSHFLGQNFAKAFDVKFAN 259

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTIT------S 562
              ++ +   +    +G   R +G ++    ++    LP  L+PIQ ++  I        
Sbjct: 260 KEGKQEY---VWGTSWGVSTRLMGALVMTHSDDKGLVLPPNLAPIQVVIVPIYKTDEQFD 316

Query: 563 SAVEYAQEIANLLKSHHLSIETDFRN-ETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
           +  E    +A  L+   +S++ D R+ +   +K  E  +K +P+ I  G  +    +  I
Sbjct: 317 AISEQVNALAAELRKLGISVKYDNRDTQKPGFKFAEWELKGVPVRIALGPNDLENGTYEI 376

Query: 622 RRFGSTTTQKVSLLDAIPILTK--ESLPPDC 650
            R  + + + VS       +    E++  D 
Sbjct: 377 ARRDNLSKEVVSKEGVASYIQNLLETIQNDM 407


>gi|114572699|ref|XP_001172425.1| PREDICTED: bifunctional aminoacyl-tRNA synthetase isoform 7 [Pan
            troglodytes]
          Length = 1512

 Score =  161 bits (407), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 75/445 (16%), Positives = 149/445 (33%), Gaps = 62/445 (13%)

Query: 226  NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
              +Q         EE+    + ++  + ++     D SG        + I++ +  +   
Sbjct: 1008 PKKQTRLGLEAKKEENLADWYSQVITKSEMIEYH-DVSGCYILRPWAYAIWEAIKDFFDA 1066

Query: 286  KIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPG 343
            +IK    E    P  + Q   + +  H   +   +  V  +  T       A++P +   
Sbjct: 1067 EIKKLGVENCYFPMFVSQSALEKEKTHVADFAPEVAWVTRSGKTEL-AEPIAIRPTSETV 1125

Query: 344  HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFN 402
                +   ++S+R+LP++L ++ +V R E        +R R F   + H  F T E+   
Sbjct: 1126 MYPAYAKWVQSHRDLPIKLNQWCNVVRWEFKHP-QPFLRTREFLWQEGHSAFATMEEAAE 1184

Query: 403  ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
            E L+I +L   +Y++     ++    T  EK  G D                        
Sbjct: 1185 EVLQILDLYAQVYEELLAIPVVKGRKTEKEKFAGGD------------------------ 1220

Query: 463  INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
                        Y    E     A GR  Q GT        S+                 
Sbjct: 1221 ------------YTTTIE-AFISASGRAIQGGTSHHLGQNFSKMFEIVFEDPKIPGEKQF 1267

Query: 523  IHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTT----------ITSSAVEYA 568
             ++  +G   R IG+M      N+ L L P    +Q ++               + +   
Sbjct: 1268 AYQNSWGLTTRTIGVMTMVHGDNMGLVLPPRVACVQVVIIPCGITNALSEEDKEALIAKC 1327

Query: 569  QEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERS-IGIRRFGS 626
             +    L   ++ +  D R+  +  +K     +K +PI +  G ++      + +R   +
Sbjct: 1328 NDYRRRLLRVNIRVRADLRDNYSPGWKFNHWELKGVPIRLEVGPRDMKSCQFVAVR-RDT 1386

Query: 627  TTTQKVSLLDAIPILTKESLPPDCQ 651
                 V+  +A   L  +++  D Q
Sbjct: 1387 GEKLTVAENEAETKL--QAILEDIQ 1409


>gi|302187169|ref|ZP_07263842.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. syringae 642]
          Length = 571

 Score =  161 bits (407), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 49/248 (19%), Positives = 96/248 (38%), Gaps = 11/248 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L        ++    H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQFLLATQKETPSDAVVVSHQLMLRAGMIRKLA---SGLYTWLPMGLRVLRKVEAIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      EI  P +    LWQ+SG W+ Y   +  +    +     R F L P +    
Sbjct: 60  EMDAAGALEILMPGIQPAELWQESGRWEQYGPELMRLVDLHN-----REFCLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+ + +  + +R+E      GLMR R F   DA+ F    +     
Sbjct: 115 TDLARNELNSYKQLPINMYQIQTKFRDEIRPRF-GLMRGREFVMKDAYSFHADHESLQVT 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             ++H    +I+   G +   V+         GS      AE+    ++ +  +     I
Sbjct: 174 YDRMHLAYSNIFTRLGLKFRPVEADNGSIGGAGSHEFHVLAESGEDDIVFSDGSDYAANI 233

Query: 464 NTGVLLGE 471
                +  
Sbjct: 234 EKAEAIPR 241



 Score = 77.1 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 63/167 (37%), Gaps = 14/167 (8%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           I R  + G I Q+            +  + +   PV +    +G  + R +   IE N  
Sbjct: 403 IKRGIEVGHIFQLGTKYSEAMKCQVLGENGK---PVNLAMGCYGIGVSRVVAAAIEQNSD 459

Query: 544 GNLPLW---LSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNET--INYKI 595
            N  +W   L+P Q  +  +   T +  E   ++   L +    +  D R++      K 
Sbjct: 460 ENGIIWNDTLAPFQIALIPLRYETEAVREATDKLYADLTAAGFEVLLDDRDKKTSPGIKF 519

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +  +  IP  I+  D+  +E ++  +    +  Q +++   +  + 
Sbjct: 520 ADMELIGIPHRIVVSDRGLAEGNLEYKSRTESQPQAIAVAGVLSFIQ 566


>gi|170096813|ref|XP_001879626.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164645029|gb|EDR09277.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 709

 Score =  161 bits (407), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 72/411 (17%), Positives = 142/411 (34%), Gaps = 67/411 (16%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRAN 317
              SG        + I++ + ++   +IK+   +    P  + Q + + +  H + +   
Sbjct: 233 YSVSGCYILKPWSYSIWEEIQTWFNTQIKELGVQNSYFPMFVSQSVLEREKDHIEGFSPE 292

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           +  V  A ++  +    A++P +       +   ++S+R+LP++L ++ SV R E     
Sbjct: 293 VAWVTRAGNSDLE-EPIAIRPTSETAMYPYYAKWIRSHRDLPLKLNQWNSVVRWEFKNP- 350

Query: 378 HGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
              +R R F   + H  F TK +   E  +I +L   +Y+D                   
Sbjct: 351 QPFLRTREFLWQEGHTAFLTKAEADAEVRQILDLYRQVYEDL------------------ 392

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
                             +       I +      G  Y    E  +  + GR  Q  T 
Sbjct: 393 ------------------LAVPVIPGIKSEKEKFAGGLYTTTLEGFIPTS-GRGIQAATS 433

Query: 497 QVDFNLPSRFNAFYV-NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP--- 552
                  SR   F +            + +  +G   R IG+M+     N  L L P   
Sbjct: 434 HCLGQNFSRPEMFNIFVEDPVDKSKSYVWQNSWGLSTRTIGVMVMVHGDNQGLVLPPRVA 493

Query: 553 -IQAIVTT----------ITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIREHSI 600
            IQ IV              +   +  +E+A  LK   +  + D R   T  YK  +   
Sbjct: 494 SIQVIVVPCGITAKSTDEQRAEINDACEELAKTLKKAGVRAKADLREGYTPGYKFNDWEQ 553

Query: 601 KKIPIIIICGDKEASE-RSIGIRRFGSTTTQKVSL-------LDAIPILTK 643
           K +P+ +  G  +  + +++ +R   +   + + L        D + ++  
Sbjct: 554 KGVPLRLEIGPNDLKKQQTLSVR-RDNGDKKPLPLANIGKNVADFLEVIQD 603


>gi|195443826|ref|XP_002069593.1| GK11601 [Drosophila willistoni]
 gi|194165678|gb|EDW80579.1| GK11601 [Drosophila willistoni]
          Length = 1717

 Score =  161 bits (407), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 85/440 (19%), Positives = 159/440 (36%), Gaps = 64/440 (14%)

Query: 226  NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
              +Q         EE+    + ++  + ++     D SG        + I++ + ++   
Sbjct: 1212 PKKQTRLGLEATKEENLPDWYSQVITKGEMIEY-YDVSGCYILRHWSFAIWKAIKNWFDA 1270

Query: 286  KI-KDDYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPG 343
            +I +   +E   P  + + + + +  H   +   +  V  + ++       A++P +   
Sbjct: 1271 EITRRGVKECYFPIFVSKAVLEREKTHIADFAPEVAWVTKSGESDL-AEPIAVRPTSETV 1329

Query: 344  HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFN 402
                +   ++SYR+LP++L ++ +V R E        +R R F   + H  +  K++   
Sbjct: 1330 MYPAYAKWIQSYRDLPIKLNQWNNVVRWEFK-HPQPFLRTREFLWQEGHTAYANKDEADK 1388

Query: 403  ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
            E L+I +L   IY       +M    T  EK  G D                        
Sbjct: 1389 EVLEILDLYALIYTHLLAIPVMKGRKTEKEKFAGGD------------------------ 1424

Query: 463  INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPV 521
                        Y    E     A GR  Q  T   +  N    F   Y +  +++    
Sbjct: 1425 ------------YTTTVE-AFISASGRAIQGATSHHLGQNFSKMFEIVYEDPETQQKK-- 1469

Query: 522  MIHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTT----ITSSAVEYA----- 568
             +++  +G   R IG+MI     N  L L P    IQAIV      + +   E A     
Sbjct: 1470 FVYQNSWGITTRTIGVMIMVHADNQGLVLPPHVACIQAIVVPCGITVNTKDEERAELLGA 1529

Query: 569  -QEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS 626
             +++   L    +  E D+R+  +  +K     +K +PI I  G K+   + I   R  +
Sbjct: 1530 CKQLEQRLIGAEVRCEGDYRDNYSPGWKFNHWELKGVPIRIEVGPKDLKAQQIVAVRRDT 1589

Query: 627  TTTQKVSLLDA---IPILTK 643
                 + L D    IP L +
Sbjct: 1590 GEKLTIPLADVEKKIPALLE 1609


>gi|56971485|gb|AAH88324.1| Eprs protein [Rattus norvegicus]
          Length = 503

 Score =  161 bits (407), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 71/402 (17%), Positives = 132/402 (32%), Gaps = 59/402 (14%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRAN 317
            D SG        + I++++  +   +IK    E    P  + Q   + +  H   +   
Sbjct: 32  YDVSGCYILRPWSYSIWESIKDFFDAEIKKLGVENCYFPIFVSQGALEKEKNHIADFAPE 91

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           +  V  +  T       A++P +       +   ++S+R+LP+RL ++ +V R E     
Sbjct: 92  VAWVTRSGKTEL-AEPIAIRPTSETVMYPAYAKWVQSHRDLPIRLNQWCNVVRWEFKHP- 149

Query: 378 HGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
              +R R F   + H  F T E+  +E L+I  L   +Y++     ++    T  EK  G
Sbjct: 150 QPFLRTREFLWQEGHSAFATFEEAADEVLQILELYARVYEELLAIPVVRGRKTEKEKFAG 209

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
            D                                    Y    E     A GR  Q  T 
Sbjct: 210 GD------------------------------------YTTTLE-AFISASGRAIQGATS 232

Query: 497 QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP---- 552
                  S+                  ++  +G   R IG+MI     N+ L L P    
Sbjct: 233 HHLGQNFSKMCEIVFEDPKTPGEKQFAYQCSWGLTTRTIGVMIMVHGDNMGLVLPPRVAS 292

Query: 553 IQAIVTT----------ITSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIK 601
           +Q +V               + +    E    L    +    D R+  +  +K     +K
Sbjct: 293 VQVVVIPCGITNTLSEEDREALMAKCNEYRRRLLGADIRARVDLRDNYSPGWKFNHWELK 352

Query: 602 KIPIIIICGDKEASERS-IGIRRFGSTTTQKVSLLDAIPILT 642
            +P+ +  G ++      + +R   +     ++  +A   L 
Sbjct: 353 GVPVRLEVGPRDMKSCQFVAVR-RDTGEKLTIAEKEAESKLK 393


>gi|51102322|gb|AAT95874.1| prolyl-tRNA synthetase [Naegleria gruberi]
          Length = 513

 Score =  161 bits (407), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 73/405 (18%), Positives = 143/405 (35%), Gaps = 55/405 (13%)

Query: 256 FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ-VLDQHLWQQSGHWDS 313
           F    + SG   +    + +++ + ++    IK    + +  P  V  + L  +  H + 
Sbjct: 9   FLDYYEVSGCYIFRPNCFYVWEKVQNFFDGHIKKLGVQNVMFPMFVTKRALETEKDHVEG 68

Query: 314 YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP 373
           +   +  V  + ++  D    AL+P +       +   +KS+R+LP++L ++ +V R E 
Sbjct: 69  FSPEVAWVTKSGNSDLD-EPIALRPTSETIMYPSYAKWIKSHRDLPLKLNQWTNVVRWEF 127

Query: 374 SGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
             ++   +R R F   + H  F   EQ   E   I  L    Y++     ++    T   
Sbjct: 128 KHAV-PFIRSREFYWQEGHSAFKNFEQAKTEVYDILELYKRTYEEILAVPVIKGKKT--- 183

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
                     +AE                          GA +    E  +    GR  Q
Sbjct: 184 ----------EAEKF-----------------------AGADFTTTIEAFIPT-NGRAVQ 209

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
             T        SR   F +   +E     ++++  +G   R +G+MI     +  + L P
Sbjct: 210 AATSHHLGQNFSRM--FKIEFEAEDKKSKLVYQNSWGLSTRSLGVMIMVHGDDKGMVLPP 267

Query: 553 ----IQAIVTTITSSAVE------YAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIK 601
                Q ++  +     +       ++ I   L+ + + I+ D R E T  +K     ++
Sbjct: 268 RVAFTQVVLIPLYFKNKDNSELETKSKTIFAQLEENGVRIKLDDRLEKTPGWKYNYWELR 327

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
            +P+ I  G K+       + R  +     V L         E L
Sbjct: 328 GVPLRIEIGPKDLENGVAMLCRRDNGEKWSVPLEQLTAQYVNEIL 372


>gi|320164647|gb|EFW41546.1| glutamyl-prolyl-tRNA synthetase [Capsaspora owczarzaki ATCC 30864]
          Length = 1526

 Score =  161 bits (407), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 74/394 (18%), Positives = 141/394 (35%), Gaps = 57/394 (14%)

Query: 260  EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ-VLDQHLWQQSGHWDSYRAN 317
             D SG          ++  +  +  R+IK    E    P  V    L +++ H   +   
Sbjct: 1056 YDISGCYILRPWACSVWDHIRDFFDREIKLLGVENAYFPMFVSKSALEKEADHIADFAPE 1115

Query: 318  MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
            +  V  +  +       AL+P +       F   ++S+R+LP+++ ++ +V R E     
Sbjct: 1116 VAWVTKSGQSDL-AEPIALRPTSETIMYPSFAKWIRSHRDLPLKINQWANVVRWEFKNPT 1174

Query: 378  HGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
               +R R F   + H  + TK +   E L+I  L   +Y+++    ++    +  EK  G
Sbjct: 1175 -PFLRTREFLWQEGHTAYETKPEADKEVLQILELYRRVYEEYLAVPVIKGKKSEKEKFAG 1233

Query: 437  SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
                                                  Y    E I+  + GR  Q  T 
Sbjct: 1234 G------------------------------------LYTTTVEAIIP-STGRGVQGATS 1256

Query: 497  QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI--- 553
                   S+     +  +        + +  +G   R IG+MI     N  L L P    
Sbjct: 1257 HNLGQNFSKMFDILIEDNDRPGQKKHVWQNSWGLTTRTIGVMIMLHGDNKGLVLPPRVAS 1316

Query: 554  -QAIVTT--ITSSAVE--------YAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIK 601
             QA++    IT+S  E        Y +++ + L++  + ++ D R+  T  YK     ++
Sbjct: 1317 LQAVIVPCGITASLSEADRAALMAYGKQVEDALRAGGIRVKFDDRDNYTPGYKFNHWELR 1376

Query: 602  KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
             +P+ I  G ++   + I   R  +      S+ 
Sbjct: 1377 GVPLRIEVGPRDMKNKQIVAVRRDTGEKTSHSVD 1410


>gi|312385395|gb|EFR29915.1| hypothetical protein AND_00854 [Anopheles darlingi]
          Length = 1070

 Score =  161 bits (407), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 85/437 (19%), Positives = 152/437 (34%), Gaps = 61/437 (13%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
             +Q         E++    + ++  + ++     D SG        + I++ + ++   
Sbjct: 562 PKKQTRLGLEATKEDNLPDWYSQVITKGEMIEY-YDVSGCYILRHWSFAIWKAIRNWFDA 620

Query: 286 KIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPG 343
           +I     +E   P  + +   + +  H   +   +  V  + D+       A++P +   
Sbjct: 621 EITRLGVKECYFPIFVSRAALEREKTHIADFAPEVAWVTKSGDSEL-AEPIAVRPTSETV 679

Query: 344 HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFN 402
               +   ++SYR+LP+RL ++ +V R E        +R R F   + H  F TK +   
Sbjct: 680 MYPAYAKWIQSYRDLPIRLNQWNNVVRWEFKHP-QPFLRTREFLWQEGHTAFATKAEADE 738

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
           E L I +L   +Y D     ++    T  EK  G D                        
Sbjct: 739 EVLTILDLYAKVYTDLLAIPVVKGRKTEKEKFAGGD------------------------ 774

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
                       Y    E  +  A GR  Q  T        SR     V  H E      
Sbjct: 775 ------------YTTTVEAYI-SASGRAIQGATSHHLGQNFSRMFDI-VYEHPETKEKEY 820

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTTITSSAV----------EYA 568
           +++  +G   R IG+MI     N  L L P    IQ ++     +A           E  
Sbjct: 821 VYQNSWGITTRTIGVMIMVHADNQGLVLPPRVACIQVVIVPCGITATTTDEERRRLYESC 880

Query: 569 QEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERS-IGIRRFGS 626
           +E+   L    +  E D+R+  +  +K     +K +P+ I  G K+  +   + +R   +
Sbjct: 881 RELERSLVGAGIRCEGDYRDNYSPGWKYNHWELKGVPVRIELGFKDLQKGECVAVR-RDN 939

Query: 627 TTTQKVSLLDAIPILTK 643
            T   V    A   L K
Sbjct: 940 GTKLTVRREQATVELPK 956


>gi|530417|emb|CAA83730.1| Thr-tRNA Synthetase 1 [Mycoplasma capricolum subsp. capricolum ATCC
           27343]
          Length = 320

 Score =  161 bits (407), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 81/315 (25%), Positives = 142/315 (45%), Gaps = 8/315 (2%)

Query: 72  VIRHSCAHIMAEAVQSIWPEVQVAIG-PIIEDGFYYDFDKEQPFSSDELAQIEKKMQEII 130
           ++  + A I + A+ ++    Q  I     E  F   F  E     D+L  I+  +  ++
Sbjct: 4   MLNLTAAFITSYAINNLKSISQAEIFYNADEMEFSTTFXTEPRLVLDDLKNIQTNINNLL 63

Query: 131 ARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRS 190
             +           KA E+     +  K    +       V +Y   +++ +     + +
Sbjct: 64  TSNLEIKSNIYDLNKALEI--LNNDYQKYLAKQMYEKYHYVKVYSINDFYMVVNXALILN 121

Query: 191 TGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLA 250
           +  +K    + ++ G+YW  D N  ML R++G    +  EL      LE+   RDHR + 
Sbjct: 122 SNFIKIID-IEQLTGSYWLNDKNNIMLQRVHGLCATSSSELKNKKVILEDRRSRDHRLIN 180

Query: 251 REMDLFHI-AEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQS 308
           + +++F      G+G+  W   G+ +   +  Y+R+K  + DY  + TP +    L++ S
Sbjct: 181 KRLNIFGFDQLVGAGLPLWLPNGFIVKNEIEKYLRQKEWEYDYIPVETPPIGTVELYKTS 240

Query: 309 GHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV 368
           GHWD Y  +    +  +        F L+PMNCP  +AV+N   + YR+LP+R+ E    
Sbjct: 241 GHWDHYGED--XFQPFNGGKGSDEQFILRPMNCPHXIAVYNTNKEXYRDLPLRICEHAIH 298

Query: 369 YRNEPSGSLHGLMRV 383
           +R E SGSL GL RV
Sbjct: 299 HRFESSGSLTGLERV 313


>gi|300176086|emb|CBK23397.2| Prolyl-tRNA synthetase [Blastocystis hominis]
          Length = 546

 Score =  161 bits (407), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 79/449 (17%), Positives = 163/449 (36%), Gaps = 61/449 (13%)

Query: 217 LSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIF 276
           L   Y      ++      Y   E+    + ++    +L     D SG        + I+
Sbjct: 30  LPHPYRKNQKKKETGLSISYKKMENFSEWYSQVIVASELIDY-YDVSGCYILRPLAYNIW 88

Query: 277 QTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTF 334
           + +  ++  KIK    +    P  + +   + +  H + +   +  V     + +     
Sbjct: 89  ERIQEFLDAKIKASGVKNAYFPMFVSRGALEKEKEHVEGFAPEVAWVT-RSGSSELQEPV 147

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV- 393
           A++P +       +   ++ +R+LP+RL ++ +V R E        +R R F   + H  
Sbjct: 148 AIRPTSETIMYPAYARWIRGHRDLPLRLNQWTNVVRWEFKHPT-PFIRTREFLWQEGHSA 206

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
           F TKE+   E L+I +    +Y                             E ++   + 
Sbjct: 207 FATKEEAEKEVLEILDYYARVY-----------------------------EELLAVPVI 237

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS 513
             + S +++         G  Y    E  +  A GR  Q  T        SR   F ++ 
Sbjct: 238 KGRKSEKEKF-------AGGLYTTTVEAFIP-ANGRAVQAATSHCLGQNFSRM--FGISY 287

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVT---------TI 560
            ++     ++ +  +G   R IG++I    ++    LP  ++PIQA++            
Sbjct: 288 ETDSGERKLVWQNSWGLTTRSIGVLIMVHGDDRGLVLPPRVAPIQAVIVYFHNSKTSEAD 347

Query: 561 TSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSI 619
                  A+++   L++  L +E D R N    +K  +   K +P+ I  G ++   + +
Sbjct: 348 VDRLRRAARDLGERLRAAGLRVEVDSRENYNPGWKFADWEQKGVPLRIELGPRDLDAQQV 407

Query: 620 GIRRFGSTT-TQKVSLL-DAIPILTKESL 646
              R    T   K ++  + I    +E+L
Sbjct: 408 VFARRDDLTPAGKRTVAWEKIEEEAREAL 436


>gi|242081969|ref|XP_002445753.1| hypothetical protein SORBIDRAFT_07g025100 [Sorghum bicolor]
 gi|241942103|gb|EES15248.1| hypothetical protein SORBIDRAFT_07g025100 [Sorghum bicolor]
          Length = 508

 Score =  161 bits (407), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 74/401 (18%), Positives = 141/401 (35%), Gaps = 63/401 (15%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKI------KDDYEEINTPQVLDQHLWQQSGHWDS 313
            D SG         +I++ L  +   +I         +    T  VL     ++  H + 
Sbjct: 52  YDISGCYILRPWAMEIWELLKEFFDAEIKKLKLKPYYFPLFVTENVLQ----KEKDHIEG 107

Query: 314 YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP 373
           +   +  V  +  +  +    A++P +       F+  ++S+R+LP+R  ++ +V R E 
Sbjct: 108 FAPEVAWVTKSGKSELEA-PIAIRPTSETVMYPYFSKWIRSHRDLPLRCNQWCNVVRWEF 166

Query: 374 SGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
           S      +R R F   + H  F TKE+   E L+I  L   IY++F    +     +  E
Sbjct: 167 SNPT-PFIRSREFLWQEGHTAFATKEEADEEVLQILELYRRIYEEFLAVPVSKGRKSEME 225

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
           K  G                                      Y    E  + +  GR  Q
Sbjct: 226 KFAGG------------------------------------LYTTSVEAFIPNT-GRGIQ 248

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL-- 550
             T        ++   F +   +EK    M+ +  +    R IG+M+     +  L L  
Sbjct: 249 GATSHCLGQNFAK--MFDITFENEKGVREMVWQNSWAYTTRSIGVMVMTHGDDKGLVLPP 306

Query: 551 --SPIQAIVTTITSSAVEY------AQEIANLLKSHHLSIETDFR-NETINYKIREHSIK 601
             +PIQ IV  +     +        +     L    +  + D R N +  +K     +K
Sbjct: 307 KVAPIQVIVIAVPYKDADTTAIKGACESTVYTLNESGIRADQDTRENYSPGWKYSHWEMK 366

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +P+ I  G K+ + + + I R  +     + + + +  + 
Sbjct: 367 GVPLRIEIGPKDLANKQVRIVRRDNGAKVDIPVTNLVEEVK 407


>gi|114572701|ref|XP_001172372.1| PREDICTED: hypothetical protein isoform 2 [Pan troglodytes]
          Length = 1434

 Score =  161 bits (407), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 75/445 (16%), Positives = 149/445 (33%), Gaps = 62/445 (13%)

Query: 226  NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
              +Q         EE+    + ++  + ++     D SG        + I++ +  +   
Sbjct: 930  PKKQTRLGLEAKKEENLADWYSQVITKSEMIEYH-DVSGCYILRPWAYAIWEAIKDFFDA 988

Query: 286  KIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPG 343
            +IK    E    P  + Q   + +  H   +   +  V  +  T       A++P +   
Sbjct: 989  EIKKLGVENCYFPMFVSQSALEKEKTHVADFAPEVAWVTRSGKTEL-AEPIAIRPTSETV 1047

Query: 344  HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFN 402
                +   ++S+R+LP++L ++ +V R E        +R R F   + H  F T E+   
Sbjct: 1048 MYPAYAKWVQSHRDLPIKLNQWCNVVRWEFKHP-QPFLRTREFLWQEGHSAFATMEEAAE 1106

Query: 403  ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
            E L+I +L   +Y++     ++    T  EK  G D                        
Sbjct: 1107 EVLQILDLYAQVYEELLAIPVVKGRKTEKEKFAGGD------------------------ 1142

Query: 463  INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
                        Y    E     A GR  Q GT        S+                 
Sbjct: 1143 ------------YTTTIE-AFISASGRAIQGGTSHHLGQNFSKMFEIVFEDPKIPGEKQF 1189

Query: 523  IHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTT----------ITSSAVEYA 568
             ++  +G   R IG+M      N+ L L P    +Q ++               + +   
Sbjct: 1190 AYQNSWGLTTRTIGVMTMVHGDNMGLVLPPRVACVQVVIIPCGITNALSEEDKEALIAKC 1249

Query: 569  QEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERS-IGIRRFGS 626
             +    L   ++ +  D R+  +  +K     +K +PI +  G ++      + +R   +
Sbjct: 1250 NDYRRRLLRVNIRVRADLRDNYSPGWKFNHWELKGVPIRLEVGPRDMKSCQFVAVR-RDT 1308

Query: 627  TTTQKVSLLDAIPILTKESLPPDCQ 651
                 V+  +A   L  +++  D Q
Sbjct: 1309 GEKLTVAENEAETKL--QAILEDIQ 1331


>gi|255089463|ref|XP_002506653.1| prolyl-tRNA synthetase [Micromonas sp. RCC299]
 gi|226521926|gb|ACO67911.1| prolyl-tRNA synthetase [Micromonas sp. RCC299]
          Length = 620

 Score =  161 bits (406), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 67/412 (16%), Positives = 149/412 (36%), Gaps = 60/412 (14%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
            +   R +  + RE +L         ++     G+ I++ +  +M    K    +    P
Sbjct: 146 SQDFSRWYLDVIRECELADYGPARGTMVI-RPYGYAIWEAIQRWMDADFKKSGVQNAYFP 204

Query: 298 QVLDQHL-WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           Q++      +++ H + +   +  V       +      ++P +      +F   ++SYR
Sbjct: 205 QLIPYSFITKEASHVEGFSPELALVT-RGGGKELEEPLVVRPTSETIVNHMFTQWIQSYR 263

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIY 415
           +LP+ + ++ +V+R E        +R   F   + H    T E+     +++ +      
Sbjct: 264 DLPLLINQWANVHRWEMR--TRPFIRTLEFLWQEGHTAHATGEEAEARAVQMIDCYARFA 321

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           +      ++V   +R E   G+D  +                                  
Sbjct: 322 ETVAAMPVIVGRKSRVESFAGADCTY---------------------------------- 347

Query: 476 GPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
               E ++ D  G+  Q GT   +  N    F+  +++   E  H   ++++ +G   R 
Sbjct: 348 --TIEAMMGD--GKALQAGTSHNLGQNFSKAFDTTFLDEKGETRH---VYQSSWGVSTRL 400

Query: 535 IGIMIENFKGN----LPLWLSPIQAIVTTITSSAVE------YAQEIANLLKSHHLSIET 584
           IG +I     +    LP  L+PIQ +V  I     +       A  IA  L +  + ++ 
Sbjct: 401 IGGIIMTHGDDAGLRLPPELAPIQVVVVPIAQKNKDKAAVADAANAIAATLTNAGIRVKV 460

Query: 585 DFRN-ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
           D  +  +  +K  +  +K +PI +  G K+ ++ +  + R      +     
Sbjct: 461 DDDDRNSPGWKFAQWEMKGVPIRVEVGPKDVAKDACVVARRDRPGKEGKEFD 512


>gi|330896119|gb|EGH28340.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 571

 Score =  161 bits (406), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 49/248 (19%), Positives = 96/248 (38%), Gaps = 11/248 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L        ++    H+ + R   +  +A   S +  W  +G ++ + + + +R 
Sbjct: 3   TSQFLLATQKETPSDAVVVSHQLMLRAGMIRKLA---SVLYTWLPRGLRVLRKVEAIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      EI  P +    LWQ+SG W+ Y   +  +       +  R F L P +    
Sbjct: 60  EMDAAGALEILMPGIQPAELWQESGRWEQYGPELMRLVD-----RHNREFCLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+ L +  + +R+E      GLMR R F   DA+ F    +     
Sbjct: 115 TDLARNELNSYKQLPINLYQIQTKFRDEIRPRF-GLMRGREFVMKDAYSFHADHESLQVT 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             ++H    +I+   G +   V+         GS      AE+    ++ +  +     I
Sbjct: 174 YDRMHLAYSNIFTRLGLKFRPVEADNGSIGGAGSHEFHVLAESGEDDIVFSDGSDYAANI 233

Query: 464 NTGVLLGE 471
                +  
Sbjct: 234 EKAEAIPR 241



 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 64/167 (38%), Gaps = 14/167 (8%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           I R  + G I Q+            +  + +   PV +    +G  + R +   IE N  
Sbjct: 403 IKRGIEVGHIFQLGTKYSEAMKCQVLGENGK---PVNLAMGCYGIGVSRVVAAAIEQNSD 459

Query: 544 GNLPLW---LSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNET--INYKI 595
            N  +W   L+P Q  +  +   T +  E   ++   L +    +  D R++      K 
Sbjct: 460 ENGIIWNDILAPFQIALVPLRYETDAVREATDKLYADLTAAGFEVLLDDRDKKTSPGIKF 519

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +  +  IP  I+  D+  +E ++  +    +  Q +++ D +  + 
Sbjct: 520 ADMELIGIPHRIVVSDRGLAEGNLEYKSRTESQPQAIAVADVLSFIQ 566


>gi|303285936|ref|XP_003062258.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226456669|gb|EEH53970.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 828

 Score =  161 bits (406), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 74/406 (18%), Positives = 145/406 (35%), Gaps = 63/406 (15%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEI--NTPQVLDQHLWQQSGHWDSYRAN 317
            D SG        + +++ +  +   +IK    E       V    L  +  H + +   
Sbjct: 367 YDISGCYILRPWAYSMWECIKDFFDAEIKKTGVENCYFPLFVSAARLEAEKDHIEDFAPE 426

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           +  V  +  +  D+   A++P +       F + ++S+R+LP++L ++ +V R E     
Sbjct: 427 VAWVTRSGQSDLDI-PIAVRPTSETVMYPQFANWIRSHRDLPLKLNQWCNVVRWEFKHPT 485

Query: 378 HGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
              +R R F   + H  F  K+    E   I  L   +Y++     ++  + +  EK  G
Sbjct: 486 -PFIRSREFLWQEGHTAFTNKKDADAEVRHILELYRRVYEELLAVPVIPGVKSEKEKFAG 544

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
                                                 Y    E  +  A GR  Q  T 
Sbjct: 545 G------------------------------------LYTTTVEAFVP-ATGRGIQGATS 567

Query: 497 Q-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL----S 551
             +  N    F+   +   +      M  +  +G   R IG+ +     ++ L L    +
Sbjct: 568 HCLGQNFAKMFD---ITFENATGGRSMAWQNSWGCTTRTIGVAVMVHGDDIGLVLPPRVA 624

Query: 552 PIQAIVTTITSSAV---------EYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIK 601
           P+QA+V TI ++ +         E  Q++   L +  +  + D R+  T  +K     +K
Sbjct: 625 PLQAVVITIPNTKMSKEDTGRMKETGQKMTASLLAAGMRAKLDDRDNYTPGWKYNHWELK 684

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA---IPILTKE 644
            +P+    G ++       + R  +   + V L D    +P L +E
Sbjct: 685 GVPLRCEFGPRDLEAGHCVVVRRDNRAKETVKLEDLPTRLPKLCEE 730


>gi|229592381|ref|YP_002874500.1| prolyl-tRNA synthetase [Pseudomonas fluorescens SBW25]
 gi|229364247|emb|CAY51951.1| proline tRNA synthetase [Pseudomonas fluorescens SBW25]
          Length = 596

 Score =  161 bits (406), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 51/253 (20%), Positives = 96/253 (37%), Gaps = 11/253 (4%)

Query: 218 SRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQ 277
           +R   T   +Q  L        ++    H+ + R   +  +A   SG+  W   G K+ +
Sbjct: 20  NRQRPTMRTSQYLLATQKETPSDAVVISHQLMLRAGMIRKLA---SGLYTWLPMGLKVMR 76

Query: 278 TLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFAL 336
            + + +R ++      E+  P      LWQ+SG W+ Y   +   K      +  R F  
Sbjct: 77  KVEAIVREEMNAAGSLEVLMPSTQPAELWQESGRWEEYGPELLRFKD-----RHGRDFCA 131

Query: 337 KPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT 396
            P +      +  + L SY++LP+ L +  + +R+E      GLMR R F   DA+ F  
Sbjct: 132 GPTHEEVITDLMRNELSSYKQLPLNLYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSFHA 190

Query: 397 KEQMFNECL-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTI 455
            +        ++H    +++   G +   V+         GS      AE+    ++ + 
Sbjct: 191 DQASLQVTYDRMHQAYCNVFTRLGLKFRPVEADNGSIGGAGSHEFHVLAESGEDDIVFSN 250

Query: 456 KNSSQDRINTGVL 468
            +     I     
Sbjct: 251 GSDYAANIEKAEA 263



 Score = 82.1 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 31/166 (18%), Positives = 60/166 (36%), Gaps = 12/166 (7%)

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKG 544
           I R  + G I    N  S+     V    E   P+ +    +G  + R +   IE N   
Sbjct: 428 IKRGIEVGHIFQLGNKYSKAMKCEVL--GENGKPITLEMGCYGIGVSRVVAAAIEQNNDE 485

Query: 545 NLPLW---LSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNET--INYKIR 596
              +W   L+P Q  +  +   T    E   ++   L +    +  D R++      K  
Sbjct: 486 KGIIWSDALAPFQVALVPLRYETEQVREATDKLYAELTAAGFEVLLDDRDKKTSPGIKFA 545

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +  +  IP  I+  D+  ++ ++  +       Q + + D +  L 
Sbjct: 546 DMELIGIPHRIVVSDRGLADGNLEYKSRTEAEAQPLPVADVLSFLQ 591


>gi|157111277|ref|XP_001651466.1| bifunctional aminoacyl-tRNA synthetase [Aedes aegypti]
 gi|108878460|gb|EAT42685.1| bifunctional aminoacyl-tRNA synthetase [Aedes aegypti]
          Length = 1702

 Score =  161 bits (406), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 91/482 (18%), Positives = 163/482 (33%), Gaps = 66/482 (13%)

Query: 185  GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
            G      G+  K   L K A    +  +               +Q         E++   
Sbjct: 1155 GTDFPVAGRTPKPAALKKEAKKEEKPKAKPEPAKPKEDGTGPKKQTRLGLEATKEDNLPD 1214

Query: 245  DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ-VLDQ 302
             + ++  + ++     D SG        + I++ + ++   +I     +E   P  V   
Sbjct: 1215 WYSQVITKGEMIEY-YDVSGCYILRHWSFAIWKAIKAWFDAEITRMGVKECYFPIFVSKA 1273

Query: 303  HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             L ++  H   +   +  V  + ++       A++P +       +   ++SYR+LP+RL
Sbjct: 1274 ALEREKSHIADFAPEVAWVTKSGESDL-AEPIAVRPTSETVMYPAYAKWIQSYRDLPIRL 1332

Query: 363  AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFE 421
             ++ +V R E        +R R F   + H  F  K     E L I +L   +Y D    
Sbjct: 1333 NQWNNVVRWEFK-HPQPFLRTREFLWQEGHTAFGVKADAEQEVLDILDLYAKVYTDLLAI 1391

Query: 422  KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
             ++    T  EK  G D                                    Y    E 
Sbjct: 1392 PVVKGRKTEKEKFAGGD------------------------------------YTTTVE- 1414

Query: 482  ILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
                A GR  Q  T   +  N    F+  + +  +++     +++  +G   R IG+MI 
Sbjct: 1415 AFISASGRAIQGATSHFLGQNFSKMFDIVFEHPETKEK--EYVYQNSWGITTRTIGVMIM 1472

Query: 541  NFKGNLPLWLSP----IQAIVTTIT----------SSAVEYAQEIANLLKSHHLSIETDF 586
                N  L L P    IQAI+               S  E  +E+   L    +  E D+
Sbjct: 1473 VHADNQGLVLPPRVACIQAIIVPCGITANTTDDERKSLYESCKELEAELVKAGVRCEGDY 1532

Query: 587  RNE-TINYKIREHSIKKIPIIIICGDKEASERS-IGIRRFGSTTTQKVSLLDA---IPIL 641
            R+  +  +K     +K +PI I  G K+   +  + +R   +     V    A   IP L
Sbjct: 1533 RDNYSPGWKYNHWELKGVPIRIELGFKDLKNKQFVAVR-RDTGEKITVKREQAAKDIPAL 1591

Query: 642  TK 643
             +
Sbjct: 1592 ME 1593


>gi|121535133|ref|ZP_01666949.1| phosphoribulokinase/uridine kinase [Thermosinus carboxydivorans
           Nor1]
 gi|121306242|gb|EAX47168.1| phosphoribulokinase/uridine kinase [Thermosinus carboxydivorans
           Nor1]
          Length = 553

 Score =  161 bits (406), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 47/247 (19%), Positives = 104/247 (42%), Gaps = 2/247 (0%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
           M   I++ F +G  + +P   T   ++   +       VA  +N  + DL   + +   +
Sbjct: 1   MSDWIEVRFINGDKRRYPKETTLLAISRERAAFYTSPIVAAKVNNDIKDLQTEINDDCLV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           + I       + V + S   +M  A + ++P+ +V +   +  G Y + +  +  + +++
Sbjct: 61  DFIDLRSEEGIRVYQRSLVFVMVAAARDLFPDGEVTVEHSLSKGLYCELNIGRAVTPEDI 120

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            ++E +M++I+A D P +++    ++A  LFE+  +  KV++L  +   E V++Y  G+ 
Sbjct: 121 ERLEVRMRQIVAEDRPIVRKSYQLQEAIRLFEAAGQTEKVKLLGQLKR-ERVSIYYCGDV 179

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
           +D   G    STG ++ F  L    G   R                     + Q      
Sbjct: 180 YDYFYGTMAPSTGCLQVFGLLFHPPGFLLRFPEKDHPDKLPEFVPQPKLAAIFQEAEQWG 239

Query: 240 ESEKRDH 246
           +  +  +
Sbjct: 240 KILRCGY 246


>gi|255019144|ref|ZP_05291270.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL F2-515]
          Length = 182

 Score =  161 bits (406), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 72/187 (38%), Positives = 112/187 (59%), Gaps = 7/187 (3%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
           +E+++RDHRKL +E++LF  + +   G+  W  KG  I + +  Y+  K +   Y  + T
Sbjct: 1   KEAKERDHRKLGKELELFTNSIEVGQGLPLWLPKGATIRRVIERYIVDKEERLGYNHVYT 60

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P + +  L++ SGHWD Y  +MF     D+         L+PMNCP H+ ++ + + SYR
Sbjct: 61  PIMANVELYKTSGHWDHYHEDMFPTMKMDN-----EELVLRPMNCPHHMMIYKNDIHSYR 115

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ELP+R+AE G ++R E SG+L GL RVRG T +DAHVF   +Q+ +E  ++  LI+ +YK
Sbjct: 116 ELPIRIAELGMMHRYEMSGALSGLQRVRGMTLNDAHVFVRPDQIKDEFKRVVELILEVYK 175

Query: 417 DFGFEKI 423
           DF     
Sbjct: 176 DFDITDY 182


>gi|45190586|ref|NP_984840.1| AEL021Cp [Ashbya gossypii ATCC 10895]
 gi|44983528|gb|AAS52664.1| AEL021Cp [Ashbya gossypii ATCC 10895]
          Length = 670

 Score =  161 bits (406), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 75/407 (18%), Positives = 142/407 (34%), Gaps = 61/407 (14%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ-VLDQHLWQQSGHWDSYRAN 317
            D SG        + I++ +  +   KI+    + +  P  +  + L ++  H + +   
Sbjct: 194 YDISGCYILKPASYCIWERIQEWFNGKIRSMGVQNVCFPMFISSRALEKEKDHIEGFAPE 253

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           +  V  A  +  +    A++P +       F   ++SYR+LP++  ++ SV R E     
Sbjct: 254 VAWVTKAGSSDLE-EPIAIRPTSETAMYPFFAKWVQSYRDLPLKYNQWTSVVRWEFK-HP 311

Query: 378 HGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
              +R R F   + H    TKE+  +E ++I +    +Y                     
Sbjct: 312 QPFLRTREFLWQEGHTAHLTKEEATDEVMQILDHYEQVY--------------------- 350

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
                          ++ +         T      GA +    E  +    GR  Q  T 
Sbjct: 351 ---------------VELLAVPVVKGTKTENEKFAGADFTTSVEGYIP-QTGRGIQGATS 394

Query: 497 -QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI-- 553
             +  N    FN    N    +   V  ++  +G   R IG+M+     N  L + P   
Sbjct: 395 HHLGQNFSKMFNICVENPLGPQHPKVHAYQNSWGLSTRSIGVMVMTHSDNKGLVIPPRVA 454

Query: 554 --QAIVTTIT----------SSAVEYAQEIANLLKSHHLSIETDF-RNETINYKIREHSI 600
             Q ++  +           S   + A+ I N L    + +  D+  N T  +K  ++ +
Sbjct: 455 QHQVVILPVGITAKTKEDVRSKIHDSARAIENRLHKAGIRVLGDYADNYTPGWKFAQYEL 514

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA---IPILTKE 644
           K +P+ +  G K+  +  +   R        V L D    IP +  E
Sbjct: 515 KGVPLRLEFGPKDMEKAQVTAVRRNDGAKISVPLADLEERIPQILDE 561


>gi|21674311|ref|NP_662376.1| prolyl-tRNA synthetase [Chlorobium tepidum TLS]
 gi|81860050|sp|Q8KCD1|SYP_CHLTE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|21647484|gb|AAM72718.1| prolyl-tRNA synthetase [Chlorobium tepidum TLS]
          Length = 481

 Score =  161 bits (406), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 69/422 (16%), Positives = 150/422 (35%), Gaps = 58/422 (13%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
            +E   + +  L R   L   ++    ++     G+ I++ + + +    K   +     
Sbjct: 8   RQEDYSQWYIDLVRSAKLADYSDVRGCMVI-RPNGYAIWEKMQAALDGMFKQTGHVNAYF 66

Query: 297 PQVLDQHL-WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P  + +    +++ H + +      V              ++P +     + +   ++SY
Sbjct: 67  PMFIPESFIAKEAEHIEGFAPECAVVTHGGGEEL-AEKLYVRPTSETIIWSSYKKWIQSY 125

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISI 414
           R+LP+ + ++ +V R E        +R   F   + H    T E+   E +++ N+  + 
Sbjct: 126 RDLPILINQWANVVRWEMR--TRLFLRTTEFLWQEGHTAHATPEEAQEEVIRMINIYRTF 183

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            +++    ++V   +  EK  G+DA +                                 
Sbjct: 184 AEEYMAMPVIVGKKSESEKFAGADATY--------------------------------- 210

Query: 475 YGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
                E +++D  G+  Q GT   +  N    F+  +        +   +    +G   R
Sbjct: 211 ---CIEAMMQD--GKALQAGTSHNLGQNFAKAFDCQFQTKDGVLDY---VWATSWGVSTR 262

Query: 534 FIGIMIENFKGNLPLWLSP----IQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETD 585
            IG +I     +  L L P     Q ++  I           A+ IA  L  H +    D
Sbjct: 263 LIGALIMAHSDDKGLVLPPKLASRQVVIIPILKGNKDEVRARARFIAKTLNRHGIPTFVD 322

Query: 586 FR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
              N +  +K  E+ ++ IP+ I  G ++  +    + R  +    ++ L D + I  +E
Sbjct: 323 DSENNSPGWKFAEYELQGIPVRIELGPRDLEQGKCIVARRDTFEKTELLLDDELTINIEE 382

Query: 645 SL 646
            L
Sbjct: 383 IL 384


>gi|126306851|ref|XP_001367334.1| PREDICTED: similar to glutamyl-prolyl tRNA synthetase isoform 1
            [Monodelphis domestica]
          Length = 1591

 Score =  161 bits (406), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 73/437 (16%), Positives = 143/437 (32%), Gaps = 60/437 (13%)

Query: 226  NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
              +Q         EE+      ++  + ++     D SG        + I++ +  +   
Sbjct: 1087 PKKQTRLGLEAKKEENLADWFSQVITKAEMIEY-YDVSGCYILRPWAYSIWEAIKDFFDA 1145

Query: 286  KIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPG 343
            +IK    E    P  + Q   + +  H   +   +  V  +  T       A++P +   
Sbjct: 1146 EIKKLGVENCYFPMFVSQGALEKEKTHVADFAPEVAWVTRSGKTEL-AEPIAVRPTSETV 1204

Query: 344  HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFN 402
                +   ++S+R+LP+RL ++ +V R E        +R R F   + H  F T E+   
Sbjct: 1205 MYPAYAKWVQSHRDLPIRLNQWCNVVRWEFKHP-QPFLRTREFLWQEGHSAFATYEEAAE 1263

Query: 403  ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
            E L+I +L   +Y++     ++    T  EK  G D                        
Sbjct: 1264 EVLQILDLYARVYEELLAIPVVKGRKTEKEKFAGGD------------------------ 1299

Query: 463  INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
                        Y    E     A GR  Q  T        S+                 
Sbjct: 1300 ------------YTTTVE-AFISASGRAIQGATSHHLGQNFSKMFEIIFEDPKTPGEKQF 1346

Query: 523  IHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTT----------ITSSAVEYA 568
             ++  +G   R IG+M      N+ L L P    +Q +V               + +   
Sbjct: 1347 AYQNSWGLTTRTIGVMTMVHGDNMGLVLPPRVACVQVVVIPCGITNALSEEDREALIRKC 1406

Query: 569  QEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERS-IGIRRFGS 626
             +    L + ++ +  D R+  +  +K     +K +PI +  G ++      + +R   +
Sbjct: 1407 NDYQKRLLTVNIRVRVDLRDNYSPGWKFNHWELKGVPIRLEVGPRDMKNCQFVAVR-RDT 1465

Query: 627  TTTQKVSLLDAIPILTK 643
                 ++  +A   L  
Sbjct: 1466 GEKLTIAEKEAETKLRD 1482


>gi|187776737|ref|ZP_02993210.1| hypothetical protein CLOSPO_00252 [Clostridium sporogenes ATCC
           15579]
 gi|187775396|gb|EDU39198.1| hypothetical protein CLOSPO_00252 [Clostridium sporogenes ATCC
           15579]
          Length = 478

 Score =  161 bits (406), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 64/417 (15%), Positives = 155/417 (37%), Gaps = 57/417 (13%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
           ++E   + +  + ++ +L   +     +I      + +++ +   +  + K   +E +  
Sbjct: 14  MDEDFAQWYTDIVKKAELADYSSVRGCMII-RPYAYAMWEMIQKDLDERFKATGHENVYM 72

Query: 297 PQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P  + + L  ++  H + +   +  V    +     R   ++P +       +   ++SY
Sbjct: 73  PLFIPESLLNKEKDHIEGFAPEVAWVTHGGEEELTER-LCVRPTSETLFCEHYAKIVQSY 131

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISI 414
           ++LP    ++ SV R E   +    +R   F   + H    T E+   E  ++ N+    
Sbjct: 132 KDLPKLYNQWCSVVRWEK--TTRPFLRTAEFLWQEGHTIHATAEEARKETEQMLNVYAKH 189

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            +D     ++    T  EK  G+ A +                                 
Sbjct: 190 VEDVLAIPVIKGQKTEQEKFAGAVATY--------------------------------- 216

Query: 475 YGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
                E ++ D  G+  Q GT      +  S F   Y +   +  +   +H+  +G   R
Sbjct: 217 ---TIESLMHD--GKALQTGTSHYLGDHFASAFGIQYSDKEGKLQN---VHQTSWGVTTR 268

Query: 534 FIGIMIENFKGN----LPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDF 586
            +G +I     N    +P  ++PIQ ++  +       ++ A E+   +      ++ D 
Sbjct: 269 MLGAIIMVHGDNSGLVVPPRIAPIQVVIVPVAQHKEGVLDKAYELKERVGKV-ARVKLDD 327

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            ++   +K  E+ +K +PI +  G K+  +  + + R  +     VS+ +   ++++
Sbjct: 328 TDKMPGWKFNEYEMKGVPIRLEVGPKDIEKNQVVLVRRDTREKITVSMDELEVVISE 384


>gi|31958|emb|CAA38224.1| glutaminyl-tRNA synthetase [Homo sapiens]
 gi|45643460|gb|AAS72877.1| proliferation-inducing protein 32 [Homo sapiens]
          Length = 1440

 Score =  161 bits (406), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 76/445 (17%), Positives = 150/445 (33%), Gaps = 62/445 (13%)

Query: 226  NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
              +Q         EE+    + ++  + ++     D SG        + I++ +  +   
Sbjct: 936  PKKQTRLGLEAKKEENLADWYSQVITKSEMIEYH-DISGCYILRPWAYAIWEAIKDFFDA 994

Query: 286  KIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPG 343
            +IK    E    P  + Q   + +  H   +   +  V  +  T       A++P +   
Sbjct: 995  EIKKLGVENCYFPMFVSQSALEKEKTHVADFAPEVAWVTRSGKTEL-AEPIAIRPTSETV 1053

Query: 344  HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFN 402
                +   ++S+R+LP++L ++ +V R E        +R R F   + H  F T E+   
Sbjct: 1054 MYPAYAKWVQSHRDLPIKLNQWCNVVRWEFKHP-QPFLRTREFLWQEGHSAFATMEEAAE 1112

Query: 403  ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
            E L+I +L   +Y++     ++    T  EK  G D                        
Sbjct: 1113 EVLQILDLYAQVYEELLAIPVVKGRKTEKEKFAGGD------------------------ 1148

Query: 463  INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
                        Y    E     A GR  Q GT        S+                 
Sbjct: 1149 ------------YTTTIE-AFISASGRAIQGGTSHHLGQNFSKMFEIVFEDPKIPGEKQF 1195

Query: 523  IHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTT----------ITSSAVEYA 568
             ++  +G   R IG+M      N+ L L P    +Q ++               + +   
Sbjct: 1196 AYQNSWGLTTRTIGVMTMVHGDNMGLVLPPRVACVQVVIIPCGITNALSEEDKEALIAKC 1255

Query: 569  QEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERS-IGIRRFGS 626
             +    L S ++ +  D R+  +  +K     +K +PI +  G ++      + +R   +
Sbjct: 1256 NDYRRRLLSVNIRVRADLRDNYSPGWKFNHWELKGVPIRLEVGPRDMKSCQFVAVR-RDT 1314

Query: 627  TTTQKVSLLDAIPILTKESLPPDCQ 651
                 V+  +A   L  +++  D Q
Sbjct: 1315 GEKLTVAENEAETKL--QAILEDIQ 1337


>gi|167762197|ref|ZP_02434324.1| hypothetical protein BACSTE_00549 [Bacteroides stercoris ATCC
           43183]
 gi|167699840|gb|EDS16419.1| hypothetical protein BACSTE_00549 [Bacteroides stercoris ATCC
           43183]
          Length = 497

 Score =  160 bits (405), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 68/438 (15%), Positives = 159/438 (36%), Gaps = 73/438 (16%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
              E+  + + +L  + DL   +     ++     G+ I++ +   +    K+  +    
Sbjct: 10  KRSENYSQWYNELVVKADLAEQSAVRGCMVI-KPYGYAIWEKMQRQLDDMFKETGHVNAY 68

Query: 296 TPQVLDQHLW-QQSGHWDSYRANMFAVKCA-------------DDTIKDLRTFALKPMNC 341
            P ++ +    +++ H + +      V                D T K      ++P + 
Sbjct: 69  FPLLIPKSFLSREAEHVEGFAKECAVVTHYRLKNDPNGGGVVVDPTAKLEEELIIRPTSE 128

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
                 + + + SYR+LP+   ++ +V+R E        +R   F   + H   T     
Sbjct: 129 TIIWNTYKNWINSYRDLPILCNQWANVFRWEMR--TRLFLRTAEFLWQEGH---TAHATR 183

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E  +    ++++Y +F                                    +      
Sbjct: 184 EEAEEEAVRMLNVYSEF--------------------------------AEKYMAVPVVK 211

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHP 520
            + +      GA      E +++D  G+  Q GT   +  N    F+  +VN  ++  + 
Sbjct: 212 GVKSANERFAGALNTYTIEAMMQD--GKALQSGTSHFLGQNFAKAFDVQFVNKENKLEY- 268

Query: 521 VMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVEYAQE------ 570
             +    +G   R +G +I    ++    LP  L+PIQ ++  I  +A   A+       
Sbjct: 269 --VWATSWGVSTRLMGALIMTHSDDNGLVLPPHLAPIQVVIVPIYKNAEMLAKIDEKVAG 326

Query: 571 IANLLKSHHLSIETDF-RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           I   LK+  +S++ D   N+   +K  ++ +K +P+ ++ G ++    ++ + R  +   
Sbjct: 327 IVAKLKAMGISVKYDNADNKRPGFKFADYEVKGVPVRLVMGGRDLENNTMEVMRRDTLEK 386

Query: 630 QKVS---LLDAIPILTKE 644
           +  S   + + +  L +E
Sbjct: 387 ETRSCDGIEEYVKDLLEE 404


>gi|78188687|ref|YP_379025.1| prolyl-tRNA synthetase [Chlorobium chlorochromatii CaD3]
 gi|114152180|sp|Q3ASP3|SYP_CHLCH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|78170886|gb|ABB27982.1| prolyl-tRNA synthetase [Chlorobium chlorochromatii CaD3]
          Length = 481

 Score =  160 bits (405), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 70/422 (16%), Positives = 151/422 (35%), Gaps = 58/422 (13%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
             E   + +  L R   L   A+    ++     G+ I++ + + + R  K+  +     
Sbjct: 8   RSEDYSQWYIDLVRSAKLADYADVKGCMVI-RPNGYAIWEKMQAALDRMFKETGHVNAYF 66

Query: 297 PQVLDQHL-WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P  + +    +++ H + +     AV       +      ++P +     + +   ++SY
Sbjct: 67  PLFIPESFIAKEAEHIEGFAPE-CAVVTHGGGQELAEKLYVRPTSETIIWSSYKKWIQSY 125

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISI 414
           R+LP+ + ++ +V R E        +R   F   + H    T E+   E L++ N+  + 
Sbjct: 126 RDLPLLINQWANVVRWEMR--TRLFLRTTEFLWQEGHTAHATHEEAQEEVLRMINVYKTF 183

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            +++    +++   +  EK  G               L+T                    
Sbjct: 184 AEEYMALPVILGKKSDSEKFAG--------------ALETF------------------- 210

Query: 475 YGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
                E +++D  G+  Q GT   +  N    F+  +            +    +G   R
Sbjct: 211 ---CIEAMMQD--GKALQAGTSHDLGQNFAKAFDCKFQTHE---KTLEYVWATSWGVSTR 262

Query: 534 FIGIMIENFKGNLPLWLSPI----QAIVTTI----TSSAVEYAQEIANLLKSHHLSIETD 585
            IG +I     +  L L P     Q ++  I      S + +A  IA  L    +S   D
Sbjct: 263 LIGALIMAHSDDRGLVLPPRLATRQVVIIPILKGDKESVLHHADNIAAALTKAGISAFVD 322

Query: 586 FRN-ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
                +  +K  E+ ++ IP+ +  G ++       + R  +    +++L D + +   E
Sbjct: 323 SSEQNSPGWKFAEYELQGIPLRLELGPRDIKNGMCVVARRDTLEKTEIALDDRLVMSINE 382

Query: 645 SL 646
            L
Sbjct: 383 IL 384


>gi|256397192|ref|YP_003118756.1| prolyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
 gi|256363418|gb|ACU76915.1| prolyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
          Length = 480

 Score =  160 bits (405), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 68/387 (17%), Positives = 144/387 (37%), Gaps = 59/387 (15%)

Query: 270 RKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDT 327
             G++I++ L + +  +IKD  +E    P ++ +   + ++ H + +   +  V  A   
Sbjct: 42  PYGYRIWELLQADLDGRIKDTGHENAYFPMLIPESYLKREAEHVEGFAPELAVVTHAGGK 101

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
             +     L+P +      +    + SYR+LP+ L ++ +V R E    L   +R   F 
Sbjct: 102 ELE-EPLVLRPTSETVIGEMMAKWISSYRDLPLLLNQWANVVRWELRPRL--FLRTTEFL 158

Query: 388 QDDAHVFCTKEQMFN-ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
             + H     E     E L++ ++   + +D     ++    T  E+  G          
Sbjct: 159 WQEGHTAHADEAEAMAETLQMLDVYEHVCRDLAAIPVVPGEKTPGERFAG---------- 208

Query: 447 IMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV-DFNLPSR 505
                + T                         E +++D  G+  Q GT      N    
Sbjct: 209 ----AVKTF----------------------TVEGMMRD--GKALQSGTTHYLGTNFAKA 240

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTI- 560
           F   + +         + H   +G   R +G  I     +    LP  L+P Q ++  I 
Sbjct: 241 FGIQFADDAG---RLELCHTTSWGMSTRLVGGTIMTHGDDKGLVLPPKLAPYQVVIVPIA 297

Query: 561 ----TSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEAS 615
                 + +   +E+A  LK+  + +  D R + +  +K  +  ++ +P+ +  G ++ +
Sbjct: 298 RGDQAETVLAAVRELAGRLKAAGIRVHVDDRPQVSPGFKFNDWEMRGVPLRLEIGPRDLA 357

Query: 616 ERSIGI-RRFGSTTTQKVSLLDAIPIL 641
             +  + +R G      +SL  A  +L
Sbjct: 358 AGTALLAKRLGDQGKVAISLDTAPEVL 384


>gi|165971562|gb|AAI58467.1| LOC100145057 protein [Xenopus (Silurana) tropicalis]
          Length = 674

 Score =  160 bits (405), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 73/437 (16%), Positives = 144/437 (32%), Gaps = 60/437 (13%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
             +Q         EE+    + ++  + ++     D SG        + I++ +  +  +
Sbjct: 170 PKKQTRLGLEAKKEENLPDWYSQVITKSEMIEY-YDVSGCYVLRPWAFAIWEAIKEFFDK 228

Query: 286 KIKD-DYEEINTPQVLD-QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPG 343
           +IK    E    P  +    L ++  H   +   +  V  +  T       A++P +   
Sbjct: 229 EIKKLGVENCYFPMFVSQAALEKEKTHIADFAPEVAWVTRSGKTEL-AEPIAVRPTSETV 287

Query: 344 HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFN 402
               +   ++S+R+LP++L ++ +V R E        +R R F   + H  F T E+   
Sbjct: 288 MYPAYAKWVQSHRDLPIKLNQWCNVVRWEFK-HPQPFLRTREFLWQEGHTAFATYEEAAE 346

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
           E L+I +L   +Y+D     ++    T  EK  G D                        
Sbjct: 347 EVLQILDLYARVYEDLLAIPVVKGRKTEKEKFAGGD------------------------ 382

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
                       Y    E     A  R  Q  T        S+                 
Sbjct: 383 ------------YTTTVE-AFISASSRAIQGATSHHLGQNFSKMFEIVFEDPKSPGLKQY 429

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTT----------ITSSAVEYA 568
            ++  +G   R IG M      N+ + L P    +Q I+               + ++  
Sbjct: 430 AYQNSWGLSTRTIGAMTMVHADNIGMVLPPRVACVQVIIIPCGITNTLSEEDKDALLKKC 489

Query: 569 QEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERS-IGIRRFGS 626
            +    L +  +    D R+  +  +K     +K +PI +  G ++   +  + +R   +
Sbjct: 490 DQYLKRLLNVDVRARADVRDNYSPGWKFNHWELKGVPIRLEVGPRDMKNKQFVAVR-RDN 548

Query: 627 TTTQKVSLLDAIPILTK 643
              Q +S   A   L +
Sbjct: 549 GEKQTISEDQAETRLKE 565


>gi|114572703|ref|XP_001172380.1| PREDICTED: glutamyl-prolyl tRNA synthetase isoform 3 [Pan
            troglodytes]
 gi|114572705|ref|XP_001172392.1| PREDICTED: glutamyl-prolyl tRNA synthetase isoform 4 [Pan
            troglodytes]
 gi|114572707|ref|XP_001172403.1| PREDICTED: glutamyl-prolyl tRNA synthetase isoform 5 [Pan
            troglodytes]
          Length = 1440

 Score =  160 bits (405), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 75/445 (16%), Positives = 149/445 (33%), Gaps = 62/445 (13%)

Query: 226  NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
              +Q         EE+    + ++  + ++     D SG        + I++ +  +   
Sbjct: 936  PKKQTRLGLEAKKEENLADWYSQVITKSEMIEYH-DVSGCYILRPWAYAIWEAIKDFFDA 994

Query: 286  KIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPG 343
            +IK    E    P  + Q   + +  H   +   +  V  +  T       A++P +   
Sbjct: 995  EIKKLGVENCYFPMFVSQSALEKEKTHVADFAPEVAWVTRSGKTEL-AEPIAIRPTSETV 1053

Query: 344  HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFN 402
                +   ++S+R+LP++L ++ +V R E        +R R F   + H  F T E+   
Sbjct: 1054 MYPAYAKWVQSHRDLPIKLNQWCNVVRWEFKHP-QPFLRTREFLWQEGHSAFATMEEAAE 1112

Query: 403  ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
            E L+I +L   +Y++     ++    T  EK  G D                        
Sbjct: 1113 EVLQILDLYAQVYEELLAIPVVKGRKTEKEKFAGGD------------------------ 1148

Query: 463  INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
                        Y    E     A GR  Q GT        S+                 
Sbjct: 1149 ------------YTTTIE-AFISASGRAIQGGTSHHLGQNFSKMFEIVFEDPKIPGEKQF 1195

Query: 523  IHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTT----------ITSSAVEYA 568
             ++  +G   R IG+M      N+ L L P    +Q ++               + +   
Sbjct: 1196 AYQNSWGLTTRTIGVMTMVHGDNMGLVLPPRVACVQVVIIPCGITNALSEEDKEALIAKC 1255

Query: 569  QEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERS-IGIRRFGS 626
             +    L   ++ +  D R+  +  +K     +K +PI +  G ++      + +R   +
Sbjct: 1256 NDYRRRLLRVNIRVRADLRDNYSPGWKFNHWELKGVPIRLEVGPRDMKSCQFVAVR-RDT 1314

Query: 627  TTTQKVSLLDAIPILTKESLPPDCQ 651
                 V+  +A   L  +++  D Q
Sbjct: 1315 GEKLTVAENEAETKL--QAILEDIQ 1337


>gi|330877991|gb|EGH12140.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str. race
           4]
          Length = 412

 Score =  160 bits (405), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 49/245 (20%), Positives = 94/245 (38%), Gaps = 11/245 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L        ++    H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQFLLATQKETPSDAVVVSHQLMLRAGMIRKLA---SGLYTWLPMGLRVLRKVEAIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      EI  P +    LWQ+SG W+ Y   +  +       +  R F L P +    
Sbjct: 60  EMDAAGALEILMPGIQPAELWQESGRWEQYGPELMRLVD-----RHNREFCLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+ + +  + +R+E      GLMR R F   DA+ F          
Sbjct: 115 TDLARNELNSYKQLPINMYQIQTKFRDEIRPRF-GLMRGREFVMKDAYSFHADHASLQVT 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             ++H    +I+   G +   V+         GS      AE+    ++ +  +     I
Sbjct: 174 YDRMHLAYSNIFTRLGLKFRPVEADNGSIGGAGSHEFHVLAESGEDDIVFSDGSDYAANI 233

Query: 464 NTGVL 468
                
Sbjct: 234 EKAEA 238


>gi|327313290|ref|YP_004328727.1| proline--tRNA ligase [Prevotella denticola F0289]
 gi|326944871|gb|AEA20756.1| proline--tRNA ligase [Prevotella denticola F0289]
          Length = 493

 Score =  160 bits (405), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 64/438 (14%), Positives = 155/438 (35%), Gaps = 72/438 (16%)

Query: 233 QYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DY 291
           +++    E+  + +  L  + +L   +     ++     G+ I++ + + + +  K+   
Sbjct: 6   KHMTKRAENYSQWYNDLVVKAELAEQSAVRGCMVI-KPYGYAIWEKMQAQLDKMFKETGV 64

Query: 292 EEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCA-------------DDTIKDLRTFALK 337
           +    P ++ +    +++ H   +      V                D   K      ++
Sbjct: 65  QNAYFPLLIPKSFLSREAEHVKGFAKECAVVTHYRLKATEDGNGVEVDPNAKLEEELIIR 124

Query: 338 PMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCT 396
           P +       + + + S+R+LP+   ++ +V R E        +R   F   + H    T
Sbjct: 125 PTSETIIWNTYKNWIHSWRDLPLMCNQWCNVMRWEMR--TRPFLRTSEFLWQEGHTAHAT 182

Query: 397 KEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIK 456
           +E+   E   + ++                               D AE  +        
Sbjct: 183 REEAEKEAQTMLHVYA-----------------------------DFAEKWLA------- 206

Query: 457 NSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHS 515
                 + +      GA      E +++D  G+  Q GT   +  N    F+  Y+N  +
Sbjct: 207 VPVVQGVKSETERFAGALDTYTIEAMMQD--GKALQSGTSHFLGQNFAKSFDVTYLNKDN 264

Query: 516 EKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVEY---- 567
           +   P  +    +G   R IG +I    ++    LP  ++PIQ  +  I     +     
Sbjct: 265 K---PEYVWATSWGVSTRLIGALIMTHSDDNGLVLPPRIAPIQVAIIPIFKGEEQLKEIT 321

Query: 568 --AQEIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRF 624
              Q + + L+   ++++ D   N+   +K  ++ +K +P+ +  G ++  + +I + R 
Sbjct: 322 AKLQPVIDQLRELGITVKYDDSDNKRPGFKFADYELKGVPVRLAMGGRDLQDNTIEVMRR 381

Query: 625 GSTTTQKVSLLDAIPILT 642
            +   + VS    +  + 
Sbjct: 382 DTLEKENVSFDGIVGRVK 399


>gi|325854993|ref|ZP_08171709.1| proline--tRNA ligase [Prevotella denticola CRIS 18C-A]
 gi|325483971|gb|EGC86911.1| proline--tRNA ligase [Prevotella denticola CRIS 18C-A]
          Length = 493

 Score =  160 bits (405), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 64/438 (14%), Positives = 155/438 (35%), Gaps = 72/438 (16%)

Query: 233 QYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DY 291
           +++    E+  + +  L  + +L   +     ++     G+ I++ + + + +  K+   
Sbjct: 6   KHMTKRAENYSQWYNDLVVKAELAEQSAVRGCMVI-KPYGYAIWEKMQAQLDKMFKETGV 64

Query: 292 EEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCA-------------DDTIKDLRTFALK 337
           +    P ++ +    +++ H   +      V                D   K      ++
Sbjct: 65  QNAYFPLLIPKSFLSREAEHVKGFAKECAVVTHYRLKATEDGNGVEVDPNAKLEEELIIR 124

Query: 338 PMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCT 396
           P +       + + + S+R+LP+   ++ +V R E        +R   F   + H    T
Sbjct: 125 PTSETIIWNTYKNWIHSWRDLPLMCNQWCNVMRWEMR--TRPFLRTSEFLWQEGHTAHAT 182

Query: 397 KEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIK 456
           +E+   E   + ++                               D AE  +        
Sbjct: 183 REEAEKEAQTMLHVYA-----------------------------DFAEKWLA------- 206

Query: 457 NSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHS 515
                 + +      GA      E +++D  G+  Q GT   +  N    F+  Y+N  +
Sbjct: 207 VPVVQGVKSETERFAGALDTYTIEAMMQD--GKALQSGTSHFLGQNFAKSFDVTYLNKDN 264

Query: 516 EKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVEY---- 567
           +   P  +    +G   R IG +I    ++    LP  ++PIQ  +  I     +     
Sbjct: 265 K---PEYVWATSWGVSTRLIGALIMTHSDDNGLVLPPRIAPIQVAIIPIFKGEEQLKEIT 321

Query: 568 --AQEIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRF 624
              Q + + L+   ++++ D   N+   +K  ++ +K +P+ +  G ++  + +I + R 
Sbjct: 322 AKLQPVIDQLRELGITVKYDDSDNKRPGFKFADYELKGVPVRLAMGGRDLQDNTIEVMRR 381

Query: 625 GSTTTQKVSLLDAIPILT 642
            +   + VS    +  + 
Sbjct: 382 DTLEKENVSFDGIVGRVK 399


>gi|126306853|ref|XP_001367377.1| PREDICTED: similar to glutamyl-prolyl tRNA synthetase isoform 2
            [Monodelphis domestica]
          Length = 1511

 Score =  160 bits (405), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 73/437 (16%), Positives = 143/437 (32%), Gaps = 60/437 (13%)

Query: 226  NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
              +Q         EE+      ++  + ++     D SG        + I++ +  +   
Sbjct: 1007 PKKQTRLGLEAKKEENLADWFSQVITKAEMIEY-YDVSGCYILRPWAYSIWEAIKDFFDA 1065

Query: 286  KIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPG 343
            +IK    E    P  + Q   + +  H   +   +  V  +  T       A++P +   
Sbjct: 1066 EIKKLGVENCYFPMFVSQGALEKEKTHVADFAPEVAWVTRSGKTEL-AEPIAVRPTSETV 1124

Query: 344  HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFN 402
                +   ++S+R+LP+RL ++ +V R E        +R R F   + H  F T E+   
Sbjct: 1125 MYPAYAKWVQSHRDLPIRLNQWCNVVRWEFKHP-QPFLRTREFLWQEGHSAFATYEEAAE 1183

Query: 403  ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
            E L+I +L   +Y++     ++    T  EK  G D                        
Sbjct: 1184 EVLQILDLYARVYEELLAIPVVKGRKTEKEKFAGGD------------------------ 1219

Query: 463  INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
                        Y    E     A GR  Q  T        S+                 
Sbjct: 1220 ------------YTTTVE-AFISASGRAIQGATSHHLGQNFSKMFEIIFEDPKTPGEKQF 1266

Query: 523  IHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTT----------ITSSAVEYA 568
             ++  +G   R IG+M      N+ L L P    +Q +V               + +   
Sbjct: 1267 AYQNSWGLTTRTIGVMTMVHGDNMGLVLPPRVACVQVVVIPCGITNALSEEDREALIRKC 1326

Query: 569  QEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERS-IGIRRFGS 626
             +    L + ++ +  D R+  +  +K     +K +PI +  G ++      + +R   +
Sbjct: 1327 NDYQKRLLTVNIRVRVDLRDNYSPGWKFNHWELKGVPIRLEVGPRDMKNCQFVAVR-RDT 1385

Query: 627  TTTQKVSLLDAIPILTK 643
                 ++  +A   L  
Sbjct: 1386 GEKLTIAEKEAETKLRD 1402


>gi|313203193|ref|YP_004041850.1| prolyL-tRNA synthetase [Paludibacter propionicigenes WB4]
 gi|312442509|gb|ADQ78865.1| prolyl-tRNA synthetase [Paludibacter propionicigenes WB4]
          Length = 490

 Score =  160 bits (405), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 65/426 (15%), Positives = 153/426 (35%), Gaps = 72/426 (16%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
             E+  + +  L  + DL   +     ++     G+ I++ + + + R  K+  +     
Sbjct: 8   RSENYSQWYNDLVIKADLAESSAVRGCMVI-KPYGYAIWEKIQAELDRMFKETGHVNAYF 66

Query: 297 PQVLDQHLW-QQSGHWDSYRANMFAVKCA-------------DDTIKDLRTFALKPMNCP 342
           P  + +    +++ H + +      V                D   K      ++P +  
Sbjct: 67  PLFIPKSFLSKEAEHVEGFAKECAVVTHHRLMADPNGKGLIVDPDAKLEEELIVRPTSET 126

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF- 401
                +   ++SYR+LP+ + ++ +V R E        +R   F   + H     E    
Sbjct: 127 IIWNTYKGWIQSYRDLPILINQWANVVRWEMR--TRLFLRTAEFLWQEGHTAHATEAEAV 184

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E  K+  +     + F    ++  + +  E+  G                         
Sbjct: 185 TEARKMLEVYADFAERFMAVPVLKGVKSANERFAG------------------------- 219

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHP 520
                      A      E +++D  G+  Q GT   +  N    F+  +++  ++  + 
Sbjct: 220 -----------ALDTYCIEALMQD--GKALQAGTSHFLGQNFAKAFDVTFMDKSNKLDY- 265

Query: 521 VMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVEYA------QE 570
             +    +G   R +G +I    ++    LP  L+P Q ++  I  +  + A       E
Sbjct: 266 --VWATSWGVSTRLMGALIMTHSDDNGLVLPPNLAPFQVVIVPIYKNEEQLAAIDAKVDE 323

Query: 571 IANLLKSHHLSIETD-FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           +   LK+  +S++ D   N+   +K  E+ +K +P+ +  G ++    ++ + R  + T 
Sbjct: 324 MIPKLKALGISVKYDNNDNKKPGWKFAEYELKGVPVRLALGARDLENGTVEVARRDTLTK 383

Query: 630 QKVSLL 635
           + V++ 
Sbjct: 384 ETVAIE 389


>gi|269926770|ref|YP_003323393.1| prolyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
 gi|269790430|gb|ACZ42571.1| prolyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
          Length = 483

 Score =  160 bits (405), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 66/404 (16%), Positives = 150/404 (37%), Gaps = 62/404 (15%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHL-WQQSGHWDSYRANMFAV 321
           G++ +   G+ I++ +   +  + K         P ++ + L  +++ H + +   +  V
Sbjct: 40  GMMVYRPYGYAIWENIQKLLDARFKATGVVNAYFPLLIPESLLRKEAEHVEGFNPQVAWV 99

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
               +   + R  A++P +    + +++  ++SYR+LP+ + ++ SV R E        +
Sbjct: 100 THGGNEELEER-LAVRPTSEAIIMQMYSKWVQSYRDLPILINQWNSVVRWEL--HTRLFL 156

Query: 382 RVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           R   F   + H    + E+     L +  +  S  ++     ++    T  E+  G+   
Sbjct: 157 RTAEFLWQEGHTLHASAEEATERTLLMLEVYRSFLEEDLAIPVIPGRKTPSERFPGAAET 216

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VD 499
           +                                      E ++ D  GR  Q  T     
Sbjct: 217 Y------------------------------------TVEALMGD--GRALQSATSHDFA 238

Query: 500 FNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQA 555
            +    F+  +++   E+ +    +   +G   R IG +I     +    +P  ++PIQ 
Sbjct: 239 DHFAKAFDITFLDKDGERKYG---YTTSWGLSTRTIGGIIMVHGDDSGLIIPPKVAPIQV 295

Query: 556 IVTTI------TSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIII 608
           +V  I          +E+   I  +L      +  D   E T  +K  E  +K +P+ + 
Sbjct: 296 VVVPIWRSEEDKQKVLEHIDRIKEVLGDS-FRLHIDLSEEKTPGWKFNEWELKGVPVRLE 354

Query: 609 CGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
            G ++ +  ++ + R  +    +V L D +  L +     D Q+
Sbjct: 355 VGPRDVANSAVVLVRRDNRDKSQVPLNDLVVRLQQ--TLADIQQ 396


>gi|189347188|ref|YP_001943717.1| prolyl-tRNA synthetase [Chlorobium limicola DSM 245]
 gi|259511580|sp|B3EE36|SYP_CHLL2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|189341335|gb|ACD90738.1| prolyl-tRNA synthetase [Chlorobium limicola DSM 245]
          Length = 481

 Score =  160 bits (405), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 71/422 (16%), Positives = 152/422 (36%), Gaps = 58/422 (13%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
             +   + +  L R   L   ++    ++     G+ I++ + + +    K+  +     
Sbjct: 8   RSQDYSQWYIDLVRSAKLADYSDVRGCMVI-RPNGYAIWEKMQAALDAMFKETGHVNAYF 66

Query: 297 PQVLDQH-LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P  + +  + +++ H + +      V              ++P +     A +   ++SY
Sbjct: 67  PLFIPESYIAKEAEHIEGFAPECAVVTHGGGEEL-AEKLYVRPTSETIIWASYKKWIQSY 125

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISI 414
           R+LP+ + ++ +V R E        +R   F   + H    TKE+   E L++  +    
Sbjct: 126 RDLPILINQWANVVRWEMR--TRLFLRTTEFLWQEGHTAHATKEEASEEVLRMITIYKKF 183

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            +++    +++   T  EK  G+D  +                                 
Sbjct: 184 AEEYMALPVIMGRKTESEKFAGADETF--------------------------------- 210

Query: 475 YGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
                E +++D  G+  Q GT   +  N    F+  +  S  E      +    +G   R
Sbjct: 211 ---CIEAMMQD--GKALQAGTSHHLGQNFAKAFDCQFQTSAGELD---FVWATSWGVSTR 262

Query: 534 FIGIMIENFKGNLPLWLSP----IQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETD 585
            IG +I     +  L L P     Q +V  I     ++ +E A  I   LK H +    D
Sbjct: 263 LIGALIMAHSDDRGLVLPPKLASRQVVVIPILRGDKTAVLEQADAIVCTLKKHGIPAFVD 322

Query: 586 FRN-ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
             +  +  +K  E+ ++ IP+ I  G ++ + +   + R  +    ++ L D   +   E
Sbjct: 323 SSDQNSPGWKFAEYELQGIPLRIELGPRDLAGKKCVVARRDTLEKTELPLDDTFSMQVSE 382

Query: 645 SL 646
            L
Sbjct: 383 IL 384


>gi|312194258|ref|YP_004014319.1| prolyl-tRNA synthetase [Frankia sp. EuI1c]
 gi|311225594|gb|ADP78449.1| prolyl-tRNA synthetase [Frankia sp. EuI1c]
          Length = 468

 Score =  160 bits (404), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 64/414 (15%), Positives = 143/414 (34%), Gaps = 53/414 (12%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
             +   R ++ +  + +L         ++     G+ +++ + + +  +IK         
Sbjct: 7   RSDDFPRWYQDVIAKAELADNGPVRGSMVI-RPYGYSLWERMQADVDARIKAAGAVNAYF 65

Query: 297 PQVLDQH-LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P  + +  L +++ H + +   +  V        +     ++P +            +SY
Sbjct: 66  PLFIPESYLRREAEHVEGFSPELAVVTHGGGKELE-EPVVVRPTSETVIGEYMAKWTQSY 124

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           R+LP+ L ++ +V R E    L   +R   F   + H             +   L   +Y
Sbjct: 125 RDLPLLLNQWANVVRWELRPRL--FLRTSEFLWQEGHTAHADGPDAAAYARRIAL--EVY 180

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           +DF      +         VG     +                             GA  
Sbjct: 181 QDF------MVSVLAMPVFVGRKTRKERF--------------------------AGAIN 208

Query: 476 GPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
               E ++ D  G+  Q  T   +  N    F+  Y+ +   +    +     +GS  R 
Sbjct: 209 TLTCEGMMGD--GKALQMATSHELGQNFARAFDIDYLGADGARH---LAWTTSWGSSTRM 263

Query: 535 IGIMI----ENFKGNLPLWLSPIQAIVTTITSS--AVEYAQEIANLLKSHHLSIETDFRN 588
           +G +I    ++    +P  L+P Q +V  +      V  A +IA+ LK+  +    D R 
Sbjct: 264 VGGLIMAHGDDAGLRVPPRLAPTQVVVLPVRDDEKVVATATQIADALKAAGVRATLDARP 323

Query: 589 E-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
             +   ++ +  +K  P+ +  G ++ +  ++ + R  +     V L +A   +
Sbjct: 324 GLSFGRRVTDWELKGAPVRVEVGPRDLAVGNVTLARRDTGEKITVPLAEAAARV 377


>gi|50302871|ref|XP_451373.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49640504|emb|CAH02961.1| KLLA0A08448p [Kluyveromyces lactis]
          Length = 672

 Score =  160 bits (404), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 83/407 (20%), Positives = 146/407 (35%), Gaps = 61/407 (14%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRAN 317
            D SG        + I++ +  +   +IK    +    P  +   + + +  H + +   
Sbjct: 196 YDVSGCYILRPASYAIWEQIQRWFDDRIKGLGVQNAYFPMFVSSRVLEKEKDHIEGFAPE 255

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           +  V  A  +  D    A++P +       +   ++SYR+LP++L ++ SV R E     
Sbjct: 256 VAWVTRAGTSELD-EPIAIRPTSETVMYPYYAKWIQSYRDLPIKLNQWNSVVRWEFK-HP 313

Query: 378 HGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
              +R R F   + H    TKE    E ++I +    +Y++     ++    T  EK  G
Sbjct: 314 QPFLRTREFLWQEGHTAHLTKEAAEEEVMQILDFYAGVYEELLAVPVVKGRKTEKEKFAG 373

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
            D                                EG  Y P          GR  Q  T 
Sbjct: 374 GDFTTTC---------------------------EG--YIP--------QTGRGIQGATS 396

Query: 497 -QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI-- 553
             +  N    FN    N    +   +  ++  +G   R IG+M+     N  L + P   
Sbjct: 397 HHLGQNFSKMFNISVENPLGSEHPKIFAYQNSWGLSTRVIGVMVMIHSDNKGLVIPPRVS 456

Query: 554 --QAIVTTIT----------SSAVEYAQEIANLLKSHHLSIETDF-RNETINYKIREHSI 600
             Q++V  +           +   E A+ I + LK   +    D+  N T  +K  ++ +
Sbjct: 457 QFQSVVLPVGITTKTSDEQRAKIHENARAIESRLKKAGIRAFGDYNDNYTPGWKFSQYEL 516

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA---IPILTKE 644
           K IP+ I  G K+  +  +   R        VSL D    IP + +E
Sbjct: 517 KGIPLRIELGPKDLEKEQVTCVRRNDGKKIVVSLNDLEKRIPEILEE 563


>gi|189217812|ref|NP_001121346.1| glutamyl-prolyl-tRNA synthetase [Xenopus laevis]
 gi|171846443|gb|AAI61719.1| LOC100158438 protein [Xenopus laevis]
          Length = 1499

 Score =  160 bits (404), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 71/437 (16%), Positives = 143/437 (32%), Gaps = 60/437 (13%)

Query: 226  NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
              +Q         EE+    + ++  + ++     D SG        + I++ +  +  +
Sbjct: 995  PKKQTRLGLEAKKEENLPDWYSQVITKSEMIEY-YDVSGCYVLRPWAFAIWEAIKEFFDK 1053

Query: 286  KIKD-DYEEINTPQVLD-QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPG 343
            +IK    E    P  +    L ++  H   +   +  V  +  T       A++P +   
Sbjct: 1054 EIKKLGVENCYFPMFVSQAALEKEKTHIADFAPEVAWVTRSGKTEL-AEPIAVRPTSETV 1112

Query: 344  HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFN 402
                +   ++S+R+LP++L ++ +V R E        +R R F   + H  F T E+   
Sbjct: 1113 MYPAYAKWVQSHRDLPIKLNQWCNVVRWEFKHP-QPFLRTREFLWQEGHTAFATYEEAAE 1171

Query: 403  ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
            E L+I +L   +Y++     ++    T  EK  G D                        
Sbjct: 1172 EVLQILDLYARVYEELLAIPVVKGRKTEKEKFAGGD------------------------ 1207

Query: 463  INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
                        Y    E     A  R  Q  T        S+                 
Sbjct: 1208 ------------YTTTVE-AFISASSRAIQGATSHHLGQNFSKMFEIVFEDPKTPGLKQY 1254

Query: 523  IHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTT----------ITSSAVEYA 568
             ++  +G   R IG M+     N  + L P    +Q I+               + ++  
Sbjct: 1255 AYQNSWGLSTRTIGAMVMVHADNTGMVLPPRVACVQIIIIPCGITNTLAEEDKDALLKKC 1314

Query: 569  QEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERS-IGIRRFGS 626
             +    L +  +    D R+  +  +K     +K +PI +  G ++   +  + +R   +
Sbjct: 1315 DQYLKRLLNVDVRARADLRDNYSPGWKFNHWELKGVPIRLEVGPRDMKNKQFVAVR-RDN 1373

Query: 627  TTTQKVSLLDAIPILTK 643
               Q +    A   L +
Sbjct: 1374 GEKQTIPEDQAETRLKE 1390


>gi|300771911|ref|ZP_07081782.1| proline--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861]
 gi|300761297|gb|EFK58122.1| proline--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861]
          Length = 490

 Score =  160 bits (404), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 66/431 (15%), Positives = 159/431 (36%), Gaps = 71/431 (16%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
             E   + +  L  + DL   +     ++     G+ I++ + + + +  KD  +     
Sbjct: 8   RAEDYSQWYNDLVIKADLAEYSAVRGCMVI-KPYGYAIWERMQAILDKMFKDTGHSNAYF 66

Query: 297 PQVLDQHLW-QQSGHWDSYRANMFAVKCA------------DDTIKDLRTFALKPMNCPG 343
           P  + +  + +++ H + +      V               D+  K      ++P +   
Sbjct: 67  PLFIPKSFFSKEASHVEGFATECAVVTHYRLKNDGAGNIIVDEDAKLEEELIVRPTSETI 126

Query: 344 HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFN 402
               +   ++SYR+LP+ + ++ +V R E        +R   F   + H    T ++   
Sbjct: 127 IWNTYRGWIESYRDLPILVNQWANVVRWEMR--TRLFLRTAEFLWQEGHTAHATSQEAIE 184

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
           E  K+  +     +++    ++    T  E+  G                          
Sbjct: 185 ETEKMLGVYAHFAENYLAVPVVRGRKTENERFAG-------------------------- 218

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPV 521
                     A      E +++D  G+  Q GT   +  N    F+  + +   ++ H  
Sbjct: 219 ----------ALDTYCIEALMQD--GKALQAGTSHFLGQNFAKAFDVKFTSKEGKQEH-- 264

Query: 522 MIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVE------YAQEI 571
            +  + +G   R +G +I    ++    LP  L+P+Q ++  I  +  E      +   +
Sbjct: 265 -VWASSWGVSTRLMGALIMAHSDDQGLVLPPMLAPVQVVIVPIYRTDEEKTNIDVFVDGL 323

Query: 572 ANLLKSHHLSIETDFRN-ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
           +  LK+ ++S++ D R+ +   +K  E  +K +P+ +  G ++    ++ + R  + T +
Sbjct: 324 SAELKAKNISVKYDDRDTQRPGFKFAEWELKGVPLRVAVGARDMQNGTVELARRDTQTKE 383

Query: 631 KVSLLDAIPIL 641
            VS      ++
Sbjct: 384 TVSQEGLSALI 394


>gi|225437777|ref|XP_002281375.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|297744088|emb|CBI37058.3| unnamed protein product [Vitis vinifera]
          Length = 516

 Score =  160 bits (404), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 72/400 (18%), Positives = 146/400 (36%), Gaps = 59/400 (14%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTP----QVLDQHLWQQSGHWDSYR 315
            D SG          +++T+ ++   +IK    +I        V    L ++  H + + 
Sbjct: 61  YDISGCYILRPWTMAVWETMQTFFDAEIKK--MKIKNCYFPLFVSPGVLQKEKDHIEGFA 118

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
             +  V  +  +  ++   A++P +       ++  ++ +R+LP+RL ++ +V R E S 
Sbjct: 119 PEVAWVTKSGQSDLEV-PIAIRPTSETVMYPYYSKWIRGHRDLPLRLNQWCNVVRWEFSH 177

Query: 376 SLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
                +R R F   + H  F TKE+   E L+I  L   IY+++    ++    +  EK 
Sbjct: 178 PT-PFIRSREFLWQEGHTAFATKEEADKEVLEILELYRRIYEEYLAIPVIKGKKSEMEKF 236

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
            G                                     FY    E  + +  GR  Q  
Sbjct: 237 AGG------------------------------------FYTTSVEAFIPNT-GRGIQGA 259

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP-- 552
           T        ++   F +   +EK    M+ +  +    R IG+M+     +  L + P  
Sbjct: 260 TSHCLGQNFAK--MFDITFENEKGEKAMVWQNSWAYSTRTIGVMVMVHGDDKGLVMPPKV 317

Query: 553 --IQAIVTTI------TSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKI 603
             +Q IV  +      T +  +      N L       E D R+  +  +K     +K +
Sbjct: 318 ASVQIIVVPVPFKDADTQAIFDACDATVNTLNEAGFRAEADLRDNYSPGWKYSHWEMKGV 377

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           P+ I  G K+ + +     R  ++    + +++ +  +  
Sbjct: 378 PLRIEIGPKDLANKQARAVRRDNSAKIDIPIVNLVEQVKD 417


>gi|118575566|ref|YP_875309.1| prolyl-tRNA synthetase [Cenarchaeum symbiosum A]
 gi|152016594|sp|A0RUI8|SYP_CENSY RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|118194087|gb|ABK77005.1| prolyl-tRNA synthetase [Cenarchaeum symbiosum A]
          Length = 476

 Score =  160 bits (404), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 76/390 (19%), Positives = 140/390 (35%), Gaps = 58/390 (14%)

Query: 270 RKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHLW--QQSGHWDSYRANMFAVKCADDT 327
             G+ I++++ + +  K+           VL       ++  H+  +   +F V  + + 
Sbjct: 40  PDGYSIWESIRTSLDVKLAARGVRNGFLPVLIPESLLGKEKEHFAGFNPEVFWVTHSGEN 99

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
               R  AL+P +     ++++  +KS+R+LP+R+  + +  R E   S    +R   F 
Sbjct: 100 KVGDR-LALRPTSETLAYSLYSKWIKSWRDLPLRINFWNTALRAEIK-STKPFLRTSEFL 157

Query: 388 QDDAHVFCT-KEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
             + H      E+  +E   I  L     +      ++    +  EK VG          
Sbjct: 158 WQEGHTVHACSEEAESEVAAILELYRETVEGDLAIPVITGRKSEKEKFVG---------- 207

Query: 447 IMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSR- 505
                                     A Y    E ++ D  GR  Q GT        SR 
Sbjct: 208 --------------------------AVYTTTMESMMPD--GRALQMGTSHFLGQNFSRP 239

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL----SPIQAIVTTIT 561
           F   + +  + +       +  +G   R IG MI     +  L L    +P+Q ++  I+
Sbjct: 240 FEVKFADKDNVEH---FAWQTSWGLSWRLIGAMIMVHGDDKGLVLPPKVAPLQVVIIPIS 296

Query: 562 SSAVEYAQEIA------NLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEA 614
            S  E AQ +A        L    +   TD R E T  +K  +  ++ +P+ I  G ++ 
Sbjct: 297 YSGEEGAQVLAAAEGMEAELLKAGIRARTDKREELTPGFKFHDWEMRGVPVRIEIGPRDL 356

Query: 615 SERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            + S  +         KV L  A   + +E
Sbjct: 357 KDGSAVLATRHDGKKSKVPLDGAAVNIEEE 386


>gi|281417052|ref|ZP_06248072.1| phosphoribulokinase/uridine kinase [Clostridium thermocellum JW20]
 gi|281408454|gb|EFB38712.1| phosphoribulokinase/uridine kinase [Clostridium thermocellum JW20]
          Length = 557

 Score =  160 bits (404), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 55/212 (25%), Positives = 95/212 (44%), Gaps = 2/212 (0%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEI 61
           + IK+ FPD S +      +  +++ES         VA  +N  + +LS  + E   +E 
Sbjct: 7   NMIKVVFPDNSEREVYEGISLQELSESCKNQYKSTIVAAKVNNDIKELSYRLNESCRVEF 66

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           I   D   + + + S + I+ +AV  ++P+ +V I   I  G Y +     P + +E+  
Sbjct: 67  IDLTDDDGMRIYKRSLSFILIKAVNDLFPDRKVIICHSISKGIYCEVKGYTPLTVEEVDM 126

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           I+ +M+EI+    PF+K+ +S ++ARE+F       +   +E    K  VTLY    + D
Sbjct: 127 IKNRMKEIVNLKIPFIKKIMSLDEAREVFRKIGRMDRFRSIE-YRKKPYVTLYECDGFQD 185

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSN 213
              G  V  TG + KF       G        
Sbjct: 186 YFYGYMVPHTGYLDKFDLKYYQPGLILMSPEK 217


>gi|154492734|ref|ZP_02032360.1| hypothetical protein PARMER_02371 [Parabacteroides merdae ATCC
           43184]
 gi|154087039|gb|EDN86084.1| hypothetical protein PARMER_02371 [Parabacteroides merdae ATCC
           43184]
          Length = 493

 Score =  159 bits (403), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 69/438 (15%), Positives = 159/438 (36%), Gaps = 75/438 (17%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
              +  + ++ L  + DL   +     ++     G+ I++ +   +    K+  +     
Sbjct: 11  RSVNYSQWYQDLVIKADLAENSAVRGCMVI-KPYGYAIWEKMQRILDDMFKETGHVNAYF 69

Query: 297 PQVLDQHLW-QQSGHWDSYRANMFAVKCA-------------DDTIKDLRTFALKPMNCP 342
           P ++ +    +++ H + +      V                D   K      ++P +  
Sbjct: 70  PLLIPKSFLSKEAEHVEGFAKECAVVTHYRLKTNHDGTGVVVDPAAKLEEELIIRPTSET 129

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMF 401
                + + ++SYR+LP+   ++ +V R E        +R   F   + H    T+E+  
Sbjct: 130 IIWNTYRNWIQSYRDLPILCNQWANVMRWEMR--TRLFLRTAEFLWQEGHTAHATREEAE 187

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E  K+  +     +++    ++  + +  E+  G                         
Sbjct: 188 IEAKKMQGVYADFAENYMAMPVIKGVKSASERFAG------------------------- 222

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHP 520
                      A      E +++D  G+  Q GT   +  N    F+  +++ + +  + 
Sbjct: 223 -----------ALDTYTIEAMMQD--GKALQAGTSHFLGQNFGKAFDVTFIDKNGKSDYA 269

Query: 521 VMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVEYAQE------ 570
                  +G   R IG +I    ++    LP  L+PIQ ++  I  S  + AQ       
Sbjct: 270 WA---TSWGVSTRLIGALIMSHSDDNGLVLPPHLAPIQVVIIPIYRSEEQLAQISEKVNG 326

Query: 571 IANLLKSHHLSIETDF-RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           I   LK+  +S++ D   N+   +K  E+ +K +P+ +  G ++    +I + R  +   
Sbjct: 327 IVAKLKALGISVKFDNADNKKPGWKFAEYELKGVPVRLAMGGRDLENNTIEVMRRDTLEK 386

Query: 630 QKVS---LLDAIPILTKE 644
           + V+   +   +  L +E
Sbjct: 387 ETVTCDNIETYVQNLLEE 404


>gi|94984677|ref|YP_604041.1| prolyl-tRNA synthetase [Deinococcus geothermalis DSM 11300]
 gi|114152189|sp|Q1J0W2|SYP_DEIGD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|94554958|gb|ABF44872.1| prolyl-tRNA synthetase [Deinococcus geothermalis DSM 11300]
          Length = 497

 Score =  159 bits (403), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 68/425 (16%), Positives = 160/425 (37%), Gaps = 57/425 (13%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
            ++     +          + ++ ++ DL   +     ++     G  +++ +  ++  +
Sbjct: 12  DKKAQQYGVTPQSVDFNDWYNEVVKKADLADNSPVAGAMVV-KPYGTALWENIQRWLDDR 70

Query: 287 IKDDYEE-INTPQVLDQHL-WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
            K    E +  P ++  +   +++ H + +   +F V     T +    + L+P +    
Sbjct: 71  FKATGHESLIFPTLIPMNFITKEADHVEGFAPELFTV-DRIGTEQLTEPYVLRPTSETII 129

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNE 403
             +++  L SYR+LP    ++GSV+R E        +R   F   + H    ++E+   E
Sbjct: 130 GYMWSGWLNSYRDLPFLHYQWGSVFRAELR--TKAFLRTSEFYWHEGHTAHASEEEARRE 187

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             +I +L     +D     ++    T  E+  G+ A +                      
Sbjct: 188 VRQILDLYHEFCRDILALPVVRGEKTASERFAGAVATYS--------------------- 226

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
                           E +++D  G+  Q GT        S+  AF V   + +      
Sbjct: 227 ---------------IEGMMRD--GKALQSGTSHYLGQNFSK--AFDVKFQTREQREEYA 267

Query: 524 HRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTIT-----SSAVEYAQEIANL 574
           +   +    R IG +I     +    +P  ++PIQ +V  ++        V   +++A+ 
Sbjct: 268 YTTSWAISSRIIGAIIMTHGDDFGLIMPPRIAPIQVVVIPVSRKENFDQMVAEGEKLAHE 327

Query: 575 LKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
           L++  L ++ D R   T  +K  +  +K +P+ I  G ++  +  + ++   +   + + 
Sbjct: 328 LRAQGLRVKVDRREGVTNGFKYNDWELKGVPVRIELGPRDLEQGVVVVKNRNAEEKETLP 387

Query: 634 LLDAI 638
             +AI
Sbjct: 388 REEAI 392


>gi|92114261|ref|YP_574189.1| prolyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043]
 gi|114152183|sp|Q1QVL8|SYP_CHRSD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|91797351|gb|ABE59490.1| prolyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043]
          Length = 573

 Score =  159 bits (403), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 44/246 (17%), Positives = 97/246 (39%), Gaps = 11/246 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       +++   H+ + R   +  ++   SG+  W   G +  + + + +R 
Sbjct: 3   ASQLLISTLKETPADADIVSHQLMLRAGMIRRLS---SGLYTWLPLGLRTLRKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +E+  P +    LWQ+SG WD Y   +  ++      +  R F   P +    
Sbjct: 60  EMNRAGAQEVLMPSIQPAELWQESGRWDQYGNLLLRIRD-----RHERDFCYGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + ++SY++LP    +  + +R+E      G+MR R F   DA+ F   +      
Sbjct: 115 TDLVRNEIRSYKQLPSNFYQIQTKFRDETRPRF-GVMRAREFIMKDAYSFDIDQAGLQRS 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +++  + I+   G +   V+         GS      A++    V+ +  +     I
Sbjct: 174 YDAMYDAYMRIFTRLGLDFRAVEADNGDIGGSGSHEFQVLADSGEDAVIFSTGSDYAANI 233

Query: 464 NTGVLL 469
                L
Sbjct: 234 EKAEAL 239



 Score = 83.3 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 11/164 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G + Q+     +  NA  ++ + +   P+++     G   R +   IE       
Sbjct: 408 RGIEVGHVFQLGTKYSTAMNATVLDDNGQAV-PLLMGCYGIGVT-RVVAAAIEQNHDAGG 465

Query: 546 --LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
              P  ++P +  +  +    +    EYA  +   L      +  D R+     K  +  
Sbjct: 466 IIWPDAIAPFEIALVPMNAHKSERVREYADTLYQQLSDAGFDVLIDDRDLRPGVKFADQE 525

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  IP  ++ GD+      +  +    +    V     +  L +
Sbjct: 526 LIGIPHRVVIGDRGLDNDELEYKGRRDSDVTMVPTEGLLSFLRE 569


>gi|225010590|ref|ZP_03701061.1| prolyl-tRNA synthetase [Flavobacteria bacterium MS024-3C]
 gi|225005419|gb|EEG43370.1| prolyl-tRNA synthetase [Flavobacteria bacterium MS024-3C]
          Length = 491

 Score =  159 bits (403), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 75/441 (17%), Positives = 165/441 (37%), Gaps = 72/441 (16%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
           +++ L    E   + + +L  + DL   +     ++     G+ I++ + + +    K+ 
Sbjct: 1   MSKNLTKRSEDYSKWYNELVGKADLAENSGVRGCMVI-KPYGYAIWEKMQAALDHMFKET 59

Query: 290 DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCA-------------DDTIKDLRTFA 335
            +E    P  + +  + +++ H D +      V                D   K      
Sbjct: 60  GHENAYFPLFIPKSYFSKEASHVDGFAKECAVVTHYRLKNAEDGSGVIVDPDAKLEEELI 119

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-F 394
           ++P +       +   ++SYR+LP+ + ++ +V R E        +R   F   + H   
Sbjct: 120 VRPTSETIIWDTYRKWIQSYRDLPLLINQWANVVRWEMR--TRLFLRTSEFLWQEGHTAH 177

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDT 454
            TKE+   E  ++  +  +  ++F    ++  L T  E+  G+   +             
Sbjct: 178 ATKEEAIAEAEQMMEVYATFAQEFMAVPVIKGLKTESERFAGALETY------------- 224

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNS 513
                                    E +++D  G+  Q GT   +  N    F+  Y   
Sbjct: 225 -----------------------CIEAMMQD--GKALQAGTSHFLGQNFAKAFDVTYATK 259

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVE 566
             ++ H   +    +G   R +G +I    ++    LP  L+PIQ ++  I   T     
Sbjct: 260 EGKQAH---VWATSWGVSTRLMGALIMTHSDDNGLVLPPKLAPIQVVIVPIYKGTDQLDA 316

Query: 567 YAQEIA---NLLKSHHLSIETDFRN-ETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
            A+++A     LKS  +S++ D R+     +K  E+ +K +PI +  G ++    +  + 
Sbjct: 317 IAEKVAPLVKALKSKGISVKFDQRDTHKPGFKFNEYELKGVPIRLAIGQRDLDNNTFEVA 376

Query: 623 RFGSTTTQKVSLLDAIPILTK 643
           R  + T + V+    +  + +
Sbjct: 377 RRDTLTKETVASDHLVEHVEQ 397


>gi|288918333|ref|ZP_06412686.1| prolyl-tRNA synthetase [Frankia sp. EUN1f]
 gi|288350228|gb|EFC84452.1| prolyl-tRNA synthetase [Frankia sp. EUN1f]
          Length = 471

 Score =  159 bits (403), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 64/409 (15%), Positives = 143/409 (34%), Gaps = 53/409 (12%)

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
            R ++ +  + +L         ++     G+ +++ + + +  +IK         P  + 
Sbjct: 15  PRWYQDVLDKAELADNGPVRGTMVI-RPYGYALWERMQADIDARIKAAGAVNAYFPLFIP 73

Query: 302 QH-LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  L +++ H + +   +  V              ++P +            +SYR+LP+
Sbjct: 74  ESYLRREAEHVEGFSPELAVVTHGGGKEL-AEPVVVRPTSETVIGEYMAKWTQSYRDLPL 132

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
            L ++ +V R E    L   +R   F   + H         +       + + +Y+DF  
Sbjct: 133 LLNQWANVVRWELRPRL--FLRTSEFLWQEGHT--AHADEADAAAYARRIALDVYRDF-- 186

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
               +         VG+    +                             GA      E
Sbjct: 187 ----MVSKLALPVFVGAKTRKERF--------------------------AGATNTMTCE 216

Query: 481 YILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
            ++ D  G+  Q  T   +  N    F+  ++ +   +    +     +GS  R IG +I
Sbjct: 217 GMMGD--GKALQMATSHELGQNFARAFDIDFLGADGGRH---LAWTTSWGSSTRMIGGLI 271

Query: 540 ----ENFKGNLPLWLSPIQAIVTTITSS--AVEYAQEIANLLKSHHLSIETDFRNE-TIN 592
               ++    +P  L+P Q IV  +      V  A+EI + L +  + +  D R   +  
Sbjct: 272 MAHGDDNGLRIPPALAPTQVIVLPVRDDEAVVAKAREITDALTAAGVRVSLDARPGLSFG 331

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            ++ +  +K IP+ +  G ++ +  ++ + R  +     V L D    +
Sbjct: 332 RRVTDAELKGIPVRVEIGPRDLAAGNVTVARRDTGEKHPVPLTDVAARV 380


>gi|325282970|ref|YP_004255511.1| Prolyl-tRNA synthetase [Deinococcus proteolyticus MRP]
 gi|324314779|gb|ADY25894.1| Prolyl-tRNA synthetase [Deinococcus proteolyticus MRP]
          Length = 505

 Score =  159 bits (403), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 70/416 (16%), Positives = 152/416 (36%), Gaps = 55/416 (13%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
             E     + ++ R+ DL   +     ++     G  +++ +   +  + K   ++ +  
Sbjct: 31  QSEDFNDWYNEVVRKADLADHSPVAGAMVV-KPYGTALWERIQRGLDDRFKATGHQNLLF 89

Query: 297 PQVLDQHL-WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P ++      +++ H + +   +F V     T +    + ++P +      +++  L SY
Sbjct: 90  PTLIPMGFIMKEADHVEGFAPELFTV-SKIGTEELAEPYVMRPTSETIIGHMWSGWLNSY 148

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           R+LP    ++GSV+R E        +R   F   + H     E                 
Sbjct: 149 RDLPFLHNQWGSVFRAELR--TKPFLRTSEFFWQEGHTAHASEAEA-------------- 192

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                         R E R   D       +++   +   + ++ +R         GA  
Sbjct: 193 --------------RAEVRQQLDEYHSFCRDVLALPVVRGEKTASERF-------AGAEN 231

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
               E +++D  G+  Q GT        SR  AF V   + +      +   +G   R I
Sbjct: 232 TYSIEGMMRD--GKALQSGTSHYLGQNFSR--AFEVKFQTAEQREEFAYTTSWGLSSRII 287

Query: 536 GIMIENFKGNL----PLWLSPIQAIVTTITSSA-----VEYAQEIANLLKSHHLSIETDF 586
           G +I     +     P  ++PIQ ++  +         VE A+ +A  L+   + ++ D 
Sbjct: 288 GALIMTHGDDFGLMLPPNIAPIQVVIVPVGRKEDFARMVEEARTLAAELEREGIRVKVDD 347

Query: 587 RNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           R   T  +K  +  +K +P+ I  G ++     + ++   S   + +  +DA+  +
Sbjct: 348 REGLTNGFKYNDWELKGVPVRIELGPRDLEAGQLVVKNRTSEDKETLGRVDAVSSM 403


>gi|323142328|ref|ZP_08077160.1| proline--tRNA ligase [Phascolarctobacterium sp. YIT 12067]
 gi|322413212|gb|EFY04099.1| proline--tRNA ligase [Phascolarctobacterium sp. YIT 12067]
          Length = 569

 Score =  159 bits (403), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 50/249 (20%), Positives = 97/249 (38%), Gaps = 11/249 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++           E+E   H+ L R      + +  +G+  +    W++ + + + +R +
Sbjct: 4   SKMYAPTLREVPSEAEIPSHQLLLRAG---FMRKSTNGMYTYLPLAWRVIKKIENIIREE 60

Query: 287 I-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +EI  P +    +W++SG WD+Y A M  +K      +    + L P +     
Sbjct: 61  MDHAGCQEIMMPIMQPAEIWKESGRWDAYGAEMVRLKD-----RHGHEYCLGPTHEEMVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +  + ++SYR+LP+ L +    +R+E      GLMR R F   D + F   E   +   
Sbjct: 116 TLVKNDVRSYRQLPLNLYQIQDKFRDERRPRF-GLMRSRDFIMKDGYSFDRDEAGLDVSY 174

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
           K +++    I+   G     V+  +      GS      A++    +    K      I 
Sbjct: 175 KAMYDAYDKIFTRCGLNFRPVEADSGAIGGTGSHEFMVLADSGEAEITYCTKCDYAADIE 234

Query: 465 TGVLLGEGA 473
              L    A
Sbjct: 235 KAELYPIKA 243



 Score = 86.4 bits (212), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 23/162 (14%), Positives = 57/162 (35%), Gaps = 7/162 (4%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPL 548
           R  + G +       S          + K  P+++     G        + ++   +  +
Sbjct: 403 RGIEAGQVFKLHTKYSAAMKCTYLDENGKEQPMVMGCYGIGVGRTMAACVEQSHDADGMI 462

Query: 549 WL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
           W    +P + +V  +     ++   A++I N L    + +  D R E    K ++  +  
Sbjct: 463 WPVAIAPYEVLVVPVNVKDEASFAKAEKIYNELHKAGVEVVIDDRKERPGVKFKDADLIG 522

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLL-DAIPILTK 643
            P+ ++ G K      + ++   +     + L  D I  + +
Sbjct: 523 YPLRVVVGPKTLQTGELEVKVRKTGEVSMLPLDGDYITAIKE 564


>gi|312962836|ref|ZP_07777323.1| prolyl-tRNA synthetase [Pseudomonas fluorescens WH6]
 gi|311282863|gb|EFQ61457.1| prolyl-tRNA synthetase [Pseudomonas fluorescens WH6]
          Length = 571

 Score =  159 bits (403), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 49/248 (19%), Positives = 94/248 (37%), Gaps = 11/248 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L        ++    H+ + R   +  +A   SG+  W   G K+ + + + +R 
Sbjct: 3   TSQYLLATQKETPSDAVVISHQLMLRAGMIRKLA---SGLYTWLPMGLKVMRKVEAIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P      LWQ+SG W+ Y   +   K      +  R F   P +    
Sbjct: 60  EMNAAGSLEVLMPSTQPAELWQESGRWEEYGPELLRFKD-----RHGRDFCAGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+ L +  + +R+E      GLMR R F   DA+ F   +      
Sbjct: 115 TDLMRNELSSYKQLPLNLYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSFHADQASLQVT 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             ++H    +++   G +   V+         GS      AE+    ++ +  +     I
Sbjct: 174 YDRMHQAYCNVFTRLGLKFRPVEADNGSIGGAGSHEFHVLAESGEDDIVFSNGSDYAANI 233

Query: 464 NTGVLLGE 471
                +  
Sbjct: 234 EKAEAIPR 241



 Score = 81.8 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 31/166 (18%), Positives = 60/166 (36%), Gaps = 12/166 (7%)

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKG 544
           I R  + G I    N  S+     V    E   P+ +    +G  + R +   IE N   
Sbjct: 403 IKRGIEVGHIFQLGNKYSKAMKCEVL--GENGKPITLDMGCYGIGVSRVVAAAIEQNNDD 460

Query: 545 NLPLW---LSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNET--INYKIR 596
              +W   L+P Q  +  +   T    E   ++   L +    +  D R++      K  
Sbjct: 461 KGIIWSDALAPFQVALVPLRYETEQVREATDKLYAELTAAGFEVLLDDRDKKTSPGIKFA 520

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +  +  IP  I+  D+  ++ ++  +       Q + + D +  L 
Sbjct: 521 DMELIGIPHRIVVSDRGLADGNLEYKSRTEAEAQPLPVADVLSFLQ 566


>gi|213163803|ref|ZP_03349513.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E00-7866]
          Length = 118

 Score =  159 bits (403), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 45/121 (37%), Positives = 77/121 (63%), Gaps = 4/121 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP    +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D SD +  + ++
Sbjct: 1   MPV---ITLPDGSQRHYDHPVSPMDVALDIGPGLAKATIAGRVNGELVDASDLIENDATL 57

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
            IIT +D   L +IRHSCAH++  A++ +WP  ++AIGP++++GFYYD D ++  + +++
Sbjct: 58  SIITAKDEEGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVVDNGFYYDVDLDRTLTQEDV 117

Query: 120 A 120
            
Sbjct: 118 E 118


>gi|78187351|ref|YP_375394.1| prolyl-tRNA synthetase [Chlorobium luteolum DSM 273]
 gi|114152226|sp|Q3B2T0|SYP_PELLD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|78167253|gb|ABB24351.1| prolyl-tRNA synthetase [Chlorobium luteolum DSM 273]
          Length = 481

 Score =  159 bits (402), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 67/422 (15%), Positives = 152/422 (36%), Gaps = 58/422 (13%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
             E   + +  L R   L   ++    ++     G+ I++ + + + R  K+  +     
Sbjct: 8   RNEDYSQWYIDLVRSAKLADYSDVRGCMVI-RPNGYAIWEKMQAALDRMFKETGHVNAYF 66

Query: 297 PQVLDQHL-WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P  + +    +++ H + +      V              ++P +     + +   ++SY
Sbjct: 67  PLFIPESFIAKEAEHIEGFAPECAVVTHGGGEEL-AEKLYVRPTSETIIWSSYKKWIQSY 125

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISI 414
           R+LP+ + ++ +V R E        +R   F   + H    T E+   E +++ N+  + 
Sbjct: 126 RDLPILINQWANVVRWEMR--TRLFLRTTEFLWQEGHTAHATPEESQEEVMRMINVYRTF 183

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            +++    +++   T  EK  G++  +                                 
Sbjct: 184 AEEYMAMPVIMGRKTDSEKFAGAEETY--------------------------------- 210

Query: 475 YGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
                E +++D  G+  Q GT   +  N    F+  +    S       +    +G   R
Sbjct: 211 ---CIEAMMQD--GKALQAGTSHNLGQNFAKAFDCQFQTKDS---RLDYVWATSWGVSTR 262

Query: 534 FIGIMIENFKGNLPLWLSP----IQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETD 585
            IG +I     +  L L P     Q ++  I     ++ +E A  +A  LK+  +    D
Sbjct: 263 LIGALIMAHSDDRGLVLPPKLASRQVVIIPILRGDKAAVLEQADAMAASLKAAGIPAFVD 322

Query: 586 FRN-ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
                +  +K  E+ ++ IP+ I  G ++  +      R  +    ++ L + +P   +E
Sbjct: 323 GSEQNSPGWKFAEYELQGIPVRIEVGPRDIEKGICIAARRDTLEKSELQLGETLPGAVQE 382

Query: 645 SL 646
            L
Sbjct: 383 IL 384


>gi|297156878|gb|ADI06590.1| prolyl-tRNA synthetase [Streptomyces bingchenggensis BCW-1]
          Length = 471

 Score =  159 bits (402), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 70/420 (16%), Positives = 160/420 (38%), Gaps = 56/420 (13%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINT 296
             E   R ++ L  + +L         ++     G+ +++ +   M  +IK +  +    
Sbjct: 10  QAEDFPRWYQDLINKAELADNGPVRGTMVI-RPYGYGLWERMQQDMDARIKAEGVQNAYF 68

Query: 297 PQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P  + Q    +++ H + +   +  V       K      ++P +       F   ++SY
Sbjct: 69  PLFIPQSYLTKEAEHVEGFAPELAIVTHGGGK-KLEEPVVVRPTSETIINEYFAKWVQSY 127

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           R+LP+ + ++ +V R E    L   +R   F   + H                       
Sbjct: 128 RDLPLLINQWANVVRWELRPRL--FLRTSEFLWQEGHTAHAT------------------ 167

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                     + +     R+      D  EN++   +   + ++++R         GA  
Sbjct: 168 ---------YEDARDFASRIHRHVYADFMENVLAMDVVLGRKTAKERF-------AGAIN 211

Query: 476 GPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
               E ++ D  G+  Q GT   +  N    FN  +++   ++    ++ +  +GS  R 
Sbjct: 212 TLTLEGMMGD--GKALQLGTSHELGQNFARAFNTQFLSKEGKQE---LVWQTSWGSTTRM 266

Query: 535 IGIMI----ENFKGNLPLWLSPIQAIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRN 588
           +G ++    ++    +P  L+P+QA+V  I    + +   +EI + L +  + ++ D R 
Sbjct: 267 VGALVMMHGDDSGLRIPPRLAPVQAVVLAIKGDEAVLAKVREIGDRLTAAGVRVQVDDRT 326

Query: 589 ETI-NYKIREHSIKKIPIIIICGDKEASERSIGIRRF---GSTTTQKVSLLDAIPILTKE 644
           +T    +  +  +K +P+ I  G ++    +  + R    G    +  +L D +P + +E
Sbjct: 327 DTPFGRRAVDWELKGVPVRIEVGPRDLEGGTAMVVRRIPGGKEPVRLEALPDLLPKVLEE 386


>gi|152984493|ref|YP_001349901.1| prolyl-tRNA synthetase [Pseudomonas aeruginosa PA7]
 gi|166980141|sp|A6VA16|SYP_PSEA7 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|150959651|gb|ABR81676.1| prolyl-tRNA synthetase [Pseudomonas aeruginosa PA7]
          Length = 571

 Score =  159 bits (402), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 52/264 (19%), Positives = 99/264 (37%), Gaps = 12/264 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++    H+ L R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTLKETPADAVVISHQLLLRAGMIRRLA---SGLYTWLPMGLRVLRKVETVVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LWQ+SG W+ Y   +  +K      +  R F + P +    
Sbjct: 60  EMNAAGALEVLMPAVQPAELWQESGRWEQYGPELLRLKD-----RHEREFCVGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+   +  + +R+E      GLMR R F   DA+ F   ++     
Sbjct: 115 TDLARNELNSYKQLPINFYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSFHLNQESLQAT 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   G +   V+         GS      A +    ++ +  +     I
Sbjct: 174 YDGMYQAYSKIFTRLGLDFRPVQADNGSIGGSGSHEFHVLANSGEDDIVFSDSSDYAANI 233

Query: 464 NTGVL-LGEGAFYGPKFEYILKDA 486
                   E A      +  L D 
Sbjct: 234 EKAEAVPRESARGAASEDMRLVDT 257



 Score = 78.3 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 28/169 (16%), Positives = 61/169 (36%), Gaps = 14/169 (8%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFK 543
            I R  + G I Q+            ++   +   PV +    +G  + R +   IE   
Sbjct: 402 VIKRGIEVGHIFQLGTKYSEAMKLSVLSEQGK---PVNLIMGCYGIGVSRVVAAAIEQNH 458

Query: 544 GN----LPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNET--INYK 594
                  P  L+P Q  +  +   T S  +    +   L +    +  D R++      K
Sbjct: 459 DERGILWPSALAPFQIALVPLKYETESVRQATDRLYAELTAAGFEVLLDDRDKKTSPGVK 518

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             +  +  IP  I+  D+  +E  +  +    + +Q + + + +  +T+
Sbjct: 519 FADMELLGIPHRIVVSDRGLNEGVLEYKGRRDSESQNLPIGELMSFITE 567


>gi|167035206|ref|YP_001670437.1| prolyl-tRNA synthetase [Pseudomonas putida GB-1]
 gi|189083507|sp|B0KTK4|SYP_PSEPG RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|166861694|gb|ABZ00102.1| prolyl-tRNA synthetase [Pseudomonas putida GB-1]
          Length = 571

 Score =  159 bits (402), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 49/248 (19%), Positives = 98/248 (39%), Gaps = 11/248 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L        ++    H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLATQKETPADAVVISHQLMLRAGMIRKLA---SGLYTWLPMGLRVMRKVEAVVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P +    LWQ+SG W+ Y   +  +K      +  R F + P +    
Sbjct: 60  EMNAAGALEVLMPSIQPAELWQESGRWEQYGPELLRLKD-----RHQRDFCVGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+ + +  + +R+E      GLMR R F   DA+ F   +    E 
Sbjct: 115 TDLARNELSSYKQLPLNMYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSFHADQASLQET 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             ++H    +++   G +   V+  T       S      AE+    V+ +  +     I
Sbjct: 174 YDRMHQAYSNVFTRLGLDFRPVQADTGSIGGSYSHEFHVLAESGEDDVIFSDSSDYAANI 233

Query: 464 NTGVLLGE 471
                +  
Sbjct: 234 EKAEAIPR 241



 Score = 83.3 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 64/177 (36%), Gaps = 14/177 (7%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
           P  +      I R  + G I Q+            +  + +   PV++    +G  + R 
Sbjct: 393 PSPDGQGTLVIKRGIEVGHIFQLGTKYSEALKCQVLGENGK---PVVLSMGCYGIGVSRV 449

Query: 535 IGIMIE-NFKGNLPLW---LSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFR 587
           +   IE ++     +W   L+P Q  +  +   T    E   ++   L +    +  D R
Sbjct: 450 VAAAIEQSYDDKGIIWNDALAPFQIALVPLRYETDVVREATDKLYAELTAAGFEVLLDDR 509

Query: 588 NET--INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           ++      K  +  +  IP  I+  D+  ++ ++  +       Q + L + +  L 
Sbjct: 510 DKKTSPGIKFADMELIGIPHRIVVSDRGLADGNLEYKHRTEQDAQALPLNEVLTFLQ 566


>gi|161528166|ref|YP_001581992.1| prolyl-tRNA synthetase [Nitrosopumilus maritimus SCM1]
 gi|160339467|gb|ABX12554.1| prolyl-tRNA synthetase [Nitrosopumilus maritimus SCM1]
          Length = 480

 Score =  159 bits (402), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 70/392 (17%), Positives = 146/392 (37%), Gaps = 61/392 (15%)

Query: 270 RKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHLW--QQSGHWDSYRANMFAVKCADDT 327
             G  I+++L +   +K   +        VL       ++  H+  +   +F V  +  T
Sbjct: 43  PDGHSIWESLKNTFDKKFAKNGIRNGFLPVLIPESLLGKEQKHFAGFNPEVFWVTHSG-T 101

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
            +     AL+P +      +++  ++S+R+LP+++  + +  R E   +    +R   F 
Sbjct: 102 NEIGDRLALRPTSETLAYTLYSKWIQSWRDLPLKINFWNTALRAEIK-ATKPFLRTSEFL 160

Query: 388 QDDAHVFC-TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
             + H    T+E+   E +KI ++  +                               E 
Sbjct: 161 WQEGHTVHITQEEAEQEVMKILDIYKNTV-----------------------------EE 191

Query: 447 IMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSR 505
            +   + T K S +++         GA Y    E I+ D  G+  Q GT   +  N    
Sbjct: 192 ELAIPVTTGKKSEKEKF-------VGAVYTTTMESIMPD--GKALQMGTSHFLGQNFSKP 242

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL----SPIQAIVTTIT 561
           F   + +  + +       +  +G   R IG MI     +  L L    +P Q ++  I 
Sbjct: 243 FEVKFADKDNVEH---FAWQTSWGVSWRLIGAMIMAHGDDQGLVLPPKVAPTQVVIVPIY 299

Query: 562 ------SSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEA 614
                    +   +EI   L++  + ++ D R   +  YK  +  +K +PI I  G K+ 
Sbjct: 300 RNDEGRDKVLPKVKEIQESLEAKDIRVQVDDRQGLSPGYKFNDWEMKGVPIRIEIGPKDI 359

Query: 615 SERSIGIRRFGSTTTQKV---SLLDAIPILTK 643
            ++SI + +  +     +    +   + +L +
Sbjct: 360 EKQSIVVAKRYNREKTNLQFSEIEKVVEVLDE 391


>gi|111020488|ref|YP_703460.1| prolyl-tRNA synthetase [Rhodococcus jostii RHA1]
 gi|110820018|gb|ABG95302.1| proline--tRNA ligase [Rhodococcus jostii RHA1]
          Length = 530

 Score =  159 bits (402), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 67/380 (17%), Positives = 143/380 (37%), Gaps = 58/380 (15%)

Query: 270 RKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHLW--QQSGHWDSYRANMFAVKCADDT 327
             G+++++ L S + R+IKD   E     +L    +  +++ H + +   +  V      
Sbjct: 93  PYGYRLWELLQSELDRRIKDTGHENAYFPLLIPESYLGREAEHVEGFSPELAVVTHVGGK 152

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
           + +     ++P +      +    + S+R+LP+ L ++ +V R E    +   +R   F 
Sbjct: 153 VLE-EPLVVRPTSETIIGEMMAKWISSHRDLPLLLNQWANVVRWELRPRM--FLRTTEFL 209

Query: 388 QDDAHVFCTKEQMFNE-CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
             + H     E       +   ++   + ++     ++    T  E+  G+ A +     
Sbjct: 210 WQEGHTAHVDEASARRETMLALDIYHEVARELAAIPVVPGEKTPGERFAGAVATY----- 264

Query: 447 IMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF 506
                                            E +++D  GR  Q GT      +  +F
Sbjct: 265 -------------------------------TIEGMMRD--GRALQSGTSHY---MGIKF 288

Query: 507 -NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTIT 561
            +AF +   SE     + H   +G   R IG ++     +     P  L+P Q ++  IT
Sbjct: 289 ASAFDIRFTSETGREELCHTTSWGMSTRMIGGIVMTHGDDKGLVFPPRLAPHQVVIVPIT 348

Query: 562 ----SSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASE 616
                +    A E+A+ L+S  +    D R   T  +K  E  ++ +P+ +  G ++  +
Sbjct: 349 RGGNVAVEGAADELAHRLRSVGVRTHVDARPHLTPGFKYNEWEMRGVPVRLELGPRDLED 408

Query: 617 RSI-GIRRFGSTTTQKVSLL 635
            ++  ++R G    Q V + 
Sbjct: 409 GTVMMVKRLGDDGKQAVPID 428


>gi|325274563|ref|ZP_08140621.1| prolyl-tRNA synthetase [Pseudomonas sp. TJI-51]
 gi|324100290|gb|EGB98078.1| prolyl-tRNA synthetase [Pseudomonas sp. TJI-51]
          Length = 571

 Score =  159 bits (402), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 50/248 (20%), Positives = 98/248 (39%), Gaps = 11/248 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L        ++    H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLATQKETPADAVVISHQLMLRAGMIRKLA---SGLYTWLPMGLRVMRKVEAVVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P +    LWQ+SG W+ Y   +  +K      +  R F + P +    
Sbjct: 60  EMNAAGALEVLMPSIQPAELWQESGRWEQYGPELLRLKD-----RHQRDFCVGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+ + +  + +R+E      GLMR R F   DA+ F   +    E 
Sbjct: 115 TDLARNELSSYKQLPLNMYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSFHADQASLQET 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             ++H    +I+   G +   V+  T       S      AE+    V+ +  +     I
Sbjct: 174 YDRMHQAYSNIFTRLGLDFRPVQADTGSIGGSYSHEFHVLAESGEDDVIFSDSSDYAANI 233

Query: 464 NTGVLLGE 471
                +  
Sbjct: 234 EKAEAIPR 241



 Score = 83.3 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 65/177 (36%), Gaps = 14/177 (7%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
           P  +      I R  + G I Q+            +  + +   PV++    +G  + R 
Sbjct: 393 PSPDGQGTLIIKRGIEVGHIFQLGTKYSEALKCQVLGENGK---PVVLSMGCYGIGVSRV 449

Query: 535 IGIMIE-NFKGNLPLW---LSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFR 587
           +   IE ++     +W   L+P Q  +  +   T +  E   ++   L +    +  D R
Sbjct: 450 VAAAIEQSYDDKGIIWNDALAPFQIALVPLRYETEAVREATDKLYAELTAAGFEVLLDDR 509

Query: 588 NET--INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           ++      K  +  +  IP  I+  D+  +E ++  +       Q + L + +  L 
Sbjct: 510 DKKTSPGIKFADMELIGIPHRIVVSDRGLAEGNLEYKHRTEQDAQPLPLNEVLTFLQ 566


>gi|114572709|ref|XP_001172362.1| PREDICTED: glutamyl-prolyl tRNA synthetase isoform 1 [Pan
            troglodytes]
          Length = 1279

 Score =  159 bits (402), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 75/445 (16%), Positives = 149/445 (33%), Gaps = 62/445 (13%)

Query: 226  NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
              +Q         EE+    + ++  + ++     D SG        + I++ +  +   
Sbjct: 775  PKKQTRLGLEAKKEENLADWYSQVITKSEMIEYH-DVSGCYILRPWAYAIWEAIKDFFDA 833

Query: 286  KIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPG 343
            +IK    E    P  + Q   + +  H   +   +  V  +  T       A++P +   
Sbjct: 834  EIKKLGVENCYFPMFVSQSALEKEKTHVADFAPEVAWVTRSGKTEL-AEPIAIRPTSETV 892

Query: 344  HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFN 402
                +   ++S+R+LP++L ++ +V R E        +R R F   + H  F T E+   
Sbjct: 893  MYPAYAKWVQSHRDLPIKLNQWCNVVRWEFK-HPQPFLRTREFLWQEGHSAFATMEEAAE 951

Query: 403  ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
            E L+I +L   +Y++     ++    T  EK  G D                        
Sbjct: 952  EVLQILDLYAQVYEELLAIPVVKGRKTEKEKFAGGD------------------------ 987

Query: 463  INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
                        Y    E     A GR  Q GT        S+                 
Sbjct: 988  ------------YTTTIE-AFISASGRAIQGGTSHHLGQNFSKMFEIVFEDPKIPGEKQF 1034

Query: 523  IHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTT----------ITSSAVEYA 568
             ++  +G   R IG+M      N+ L L P    +Q ++               + +   
Sbjct: 1035 AYQNSWGLTTRTIGVMTMVHGDNMGLVLPPRVACVQVVIIPCGITNALSEEDKEALIAKC 1094

Query: 569  QEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERS-IGIRRFGS 626
             +    L   ++ +  D R+  +  +K     +K +PI +  G ++      + +R   +
Sbjct: 1095 NDYRRRLLRVNIRVRADLRDNYSPGWKFNHWELKGVPIRLEVGPRDMKSCQFVAVR-RDT 1153

Query: 627  TTTQKVSLLDAIPILTKESLPPDCQ 651
                 V+  +A   L  +++  D Q
Sbjct: 1154 GEKLTVAENEAETKL--QAILEDIQ 1176


>gi|297202644|ref|ZP_06920041.1| prolyl-tRNA synthetase [Streptomyces sviceus ATCC 29083]
 gi|197713219|gb|EDY57253.1| prolyl-tRNA synthetase [Streptomyces sviceus ATCC 29083]
          Length = 471

 Score =  159 bits (402), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 64/410 (15%), Positives = 149/410 (36%), Gaps = 53/410 (12%)

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
            R ++ L  + +L         ++     G+ +++ + + M  +IK+   +    P ++ 
Sbjct: 15  PRWYQDLITKAELADNGPVRGTMVI-RPYGYGLWERMQAEMDARIKETGTQNAYFPLLIP 73

Query: 302 QHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           Q    +++ H + +   +  V        +     ++P +       F+  ++SYR+LP+
Sbjct: 74  QSYLTREADHVEGFAPELAVVTHGGGKELE-EPAVVRPTSEMIINDYFSKWVQSYRDLPL 132

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
            + ++ +V R E    L   +R   F   + H     ++         +  +        
Sbjct: 133 LINQWANVVRWELRPRL--FLRTTEFLWQEGHTAHATQEDARAFASHIHRQVY------- 183

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
                                   E+ M  VL       +  +        GA      E
Sbjct: 184 ------------------------EDFMTNVLAMDVVPGRKTVKERFA---GAINTLTLE 216

Query: 481 YILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
            ++ D  G+  Q  T   +  N    FN  Y++    +    ++ +  +GS  R IG ++
Sbjct: 217 GMMGD--GKALQMATSHELGQNFAKAFNTSYLSKDGTQE---LVWQTSWGSTTRMIGALV 271

Query: 540 ----ENFKGNLPLWLSPIQAIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETI-N 592
               ++    +P  L+  Q +V  I      +   ++I + LK+  L +  D R +T   
Sbjct: 272 MMHGDDNGLRVPPRLAQTQVVVLAIKGDEQVLAKVRDIGDRLKAAGLRVHVDDRTDTPFG 331

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +  +  +K +P+ +  G ++    +  + R      + V++ D + +L 
Sbjct: 332 RRAVDWELKGVPVRVEVGPRDLESGTAMVARRIPGGKEAVAVDDLVRLLR 381


>gi|254382003|ref|ZP_04997365.1| prolyl-tRNA synthetase 2 [Streptomyces sp. Mg1]
 gi|194340910|gb|EDX21876.1| prolyl-tRNA synthetase 2 [Streptomyces sp. Mg1]
          Length = 470

 Score =  159 bits (402), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 71/419 (16%), Positives = 155/419 (36%), Gaps = 55/419 (13%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINT 296
             E   R ++ L  + +L         ++     G+ +++ +   M  R      +    
Sbjct: 10  QAEDFPRWYQDLINKAELADNGPVRGTMVI-RPYGYGLWERMQQEMDARIKDAGAQNAYF 68

Query: 297 PQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P  + Q    +++ H + +   +  V        +     ++P +       F+  ++SY
Sbjct: 69  PLFIPQSYLTKEAEHVEGFAPELAVVTHGGGKELE-EPVVVRPTSETIINDYFSKWVQSY 127

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           R+LP+ + ++ +V R E        +R   F   + H                       
Sbjct: 128 RDLPLLINQWANVVRWEMRP--RVFLRTSEFLWQEGHTAHAT------------------ 167

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                     + +     R+ +D   D   N++   +   + ++++R         GA  
Sbjct: 168 ---------YEDARDYAARIHTDVYGDFMTNVLGIDVVLGRKTAKERF-------AGAIN 211

Query: 476 GPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
               E ++ D  G+  Q GT   +  N    FN  Y++   ++    ++ +  +G   R 
Sbjct: 212 TLTLEGMMGD--GKALQLGTSHELGTNFAKAFNTQYLSKEGKQE---LVWQTSWGVSTRM 266

Query: 535 IGIMI----ENFKGNLPLWLSPIQAIVTTI-TSSAVEYAQEIANLLKSHHLSIETDFRNE 589
           +G +I    ++    +P  L+ +Q +V  I    AV   +E+   LK+  L ++ D R +
Sbjct: 267 VGGLIMSHGDDNGLRVPPRLAHVQVVVMAIKGDEAVAKVRELGAQLKAAGLRVQVDDRVD 326

Query: 590 TI-NYKIREHSIKKIPIIIICGDKEASERSIGIRRF---GSTTTQKVSLLDAIPILTKE 644
           T    +  +  +K +P+ I  G ++    +  + R    G    Q  +LLD +P +  E
Sbjct: 327 TPFGRRAVDWELKGVPVRIEIGPRDLENGTAMLARRIPGGKEAVQISALLDLLPKVLDE 385


>gi|321460980|gb|EFX72016.1| hypothetical protein DAPPUDRAFT_227683 [Daphnia pulex]
          Length = 1566

 Score =  159 bits (402), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 71/430 (16%), Positives = 150/430 (34%), Gaps = 61/430 (14%)

Query: 227  TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
             +Q         +E+    + ++  + ++     D SG        + I++++  +   +
Sbjct: 1062 KKQTRLGLEAKKDENLAEWYSQVITKAEMIEY-YDVSGCYILRPWAYAIWESIKDFFDAE 1120

Query: 287  IKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
            IK    +    P  +  H  + +  H   +   +  V  + ++       A++P +    
Sbjct: 1121 IKKLGVQNCYFPMFVSHHALEKEKTHIADFAPEVAWVTKSGNSDL-AEPIAIRPTSETVM 1179

Query: 345  VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNE 403
               +   ++S+R+LP++L ++ +V R E        +R R F   + H  F T ++   E
Sbjct: 1180 YPAYAKWIQSHRDLPLKLNQWNNVVRWEFK-HPQPFLRTREFLWQEGHTAFATAKEAEEE 1238

Query: 404  CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +I  L   +Y D     ++    T  EK  G D                         
Sbjct: 1239 VFQILELYSQVYTDLMAIPVIKGRKTEKEKFAGGD------------------------- 1273

Query: 464  NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
                       +    E     A GR  Q  T        S+     +    E      I
Sbjct: 1274 -----------FTTTVE-AFIAASGRGIQGATSHHLGQNFSKMFEIVI-EDPETKEKKHI 1320

Query: 524  HRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTT--ITSSAVE--------YAQ 569
            ++  +G   R IG+M+     +  L L P    IQ ++    I  +  E          Q
Sbjct: 1321 YQNSWGLTTRTIGVMVMVHSDDKGLVLPPNVASIQVVIVPCGINVNVSEEEKNNLMTACQ 1380

Query: 570  EIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERS-IGIRRFGST 627
            E   +L +  + ++ D+R+  +  +K     +K +P+ +  G ++  +   + +R   ++
Sbjct: 1381 EYEKVLSAAGIRVKGDYRDNYSPGWKFNHWELKGVPLRVEIGPRDVKQGEYVAVR-RDTS 1439

Query: 628  TTQKVSLLDA 637
                 S+  A
Sbjct: 1440 EKLTKSMASA 1449


>gi|315648100|ref|ZP_07901201.1| prolyl-tRNA synthetase [Paenibacillus vortex V453]
 gi|315276746|gb|EFU40089.1| prolyl-tRNA synthetase [Paenibacillus vortex V453]
          Length = 485

 Score =  159 bits (401), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 72/410 (17%), Positives = 149/410 (36%), Gaps = 59/410 (14%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
             E   R +  + ++ DL   +    G I +   G++I++ + + + R+ K   +     
Sbjct: 17  QGEDFSRWYIDVIKKADLMDYSPVR-GCIVFKPDGYEIWEHIQAELDRRFKATGHRNAYF 75

Query: 297 PQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P  + +  + ++  H + +   +  V  A     + R  A++P +      +++  ++SY
Sbjct: 76  PLFIPESFFQKEKEHVEGFNPELPWVTEAAGEKLEER-LAIRPTSETMFGHMYSKWIQSY 134

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN-ECLKIHNLIISI 414
           R+LPV + ++ +V R E        +R   F   + H     E     E +++ ++    
Sbjct: 135 RDLPVLINQWANVVRWEKR--TLPFLRTSEFLWQEGHTAHETEVEARGETMQMLDIYQQF 192

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            +D+    ++    T  EK  G                                    A 
Sbjct: 193 VEDYLAIPVIKGQKTPSEKFAG------------------------------------AV 216

Query: 475 YGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
                E ++KD  GR  Q GT      N    F   Y+N  +   +    H   +G   R
Sbjct: 217 DTFSIEAMMKD--GRAVQAGTSHYMGTNFSQAFEIQYLNRENTLEYA---HTTSWGVSTR 271

Query: 534 FIGIMI----ENFKGNLPLWLSPIQAIVTTIT-----SSAVEYAQEIANLLKSHHLSIET 584
            IG +I    ++    LP  ++P Q I+  I       + V    E+   LKS  + +  
Sbjct: 272 LIGSLIMVHGDDRGLVLPPKVAPTQVIMIPIGPPKTREAVVGRTDELFRELKSAGIRVRV 331

Query: 585 DFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
           D   +    +K  E+ ++ +P+ +  G ++       +    +   + V 
Sbjct: 332 DDNPDVRPGWKFNEYEMRGVPVRLEIGPRDMENGVCVLVSRITGEKKIVE 381


>gi|50284855|ref|XP_444855.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49524157|emb|CAG57748.1| unnamed protein product [Candida glabrata]
          Length = 673

 Score =  159 bits (401), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 72/406 (17%), Positives = 142/406 (34%), Gaps = 59/406 (14%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRAN 317
            D SG        + I++++  Y   KIK    +    P  +   + + +  H + +   
Sbjct: 197 YDISGCYILRPNSYAIWESIQDYFNAKIKAIGVKNAYFPMFVSSRVLEKEKDHVEGFAPE 256

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           +  V  A  +  +    A++P +       +   ++SYR+LP++L ++ SV R E     
Sbjct: 257 VAWVTRAGSSELE-EPIAIRPTSETVIYPYYAKWIQSYRDLPLKLNQWNSVVRWEFKHP- 314

Query: 378 HGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
              +R R F   + H  F  ++    E L++ +    IY +     ++    T  EK  G
Sbjct: 315 QPFLRTREFLWQEGHTAFLDQDDAEKEVLQVLDFYAGIYNELLAVPVVKGKKTEKEKFAG 374

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
                                               A +    E  + +         + 
Sbjct: 375 ------------------------------------AAFTTTVEGYIPETGRGIQGATSH 398

Query: 497 QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI--- 553
            +  N    FN    N    +   V  ++  +G   R +G+M+     N  L + P    
Sbjct: 399 HLGQNFSKMFNLSVENPLGPEHPKVYAYQNSWGLSTRTLGVMVMTHSDNKGLVVPPRVAQ 458

Query: 554 -QAIVTTIT----------SSAVEYAQEIANLLKSHHLSIETDF-RNETINYKIREHSIK 601
            QA+V  +            S  + A+ + + L    +    D+  N T  +K  ++ +K
Sbjct: 459 HQAVVIPVGITKKTTDEQRKSIHDAAKNVEDRLLKASVRAFGDYNDNYTPGWKFSQYELK 518

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA---IPILTKE 644
            IP+ +  G K+  +  + + R   +    V L +    IP +  E
Sbjct: 519 GIPLRVELGPKDIEQGQVVVVRRNDSRKYVVKLDELESRIPEIMDE 564


>gi|34540714|ref|NP_905193.1| prolyl-tRNA synthetase [Porphyromonas gingivalis W83]
 gi|81417446|sp|Q7MVS7|SYP_PORGI RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|34397028|gb|AAQ66092.1| prolyl-tRNA synthetase [Porphyromonas gingivalis W83]
          Length = 493

 Score =  159 bits (401), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 69/437 (15%), Positives = 152/437 (34%), Gaps = 73/437 (16%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
             ES  + ++ L  + DL   +     ++     G+ I++ +   +    K+  +     
Sbjct: 11  RSESYSQWYQDLVIKADLAENSAVRGCMVI-KPYGYAIWEKMQRQLDDMFKETGHVNAYF 69

Query: 297 PQVLDQHLW-QQSGHWDSYRANMFAVKCA-------------DDTIKDLRTFALKPMNCP 342
           P  + +    +++ H + +      V                D   K      ++P +  
Sbjct: 70  PLFIPKSFLSREAEHVEGFAKECAVVTHYRLKANPDGDGVVVDPQAKLEEELIVRPTSET 129

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN 402
                + + ++S+R+LP+   ++ +V R E        +R   F   + H   T      
Sbjct: 130 IIWNTYKNWIQSHRDLPILCNQWANVVRWEMR--TRLFLRTAEFLWQEGH---TAHATKE 184

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
           E  +    ++ +Y  F                                  + +       
Sbjct: 185 EAEEEARRMLEVYATF--------------------------------AEEYMAMPVVKG 212

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPV 521
           + +      GA      E +++D  G+  Q GT   +  N    FN  + +    +    
Sbjct: 213 VKSANERFAGAVDTYTIEALMQD--GKALQSGTSHFLGQNFAKAFNVTFADKDGNRD--- 267

Query: 522 MIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVEYAQ------EI 571
            +    +G   R +G +I    ++    LP  L+P Q ++  I  +  + AQ      +I
Sbjct: 268 FVWATSWGVSTRLMGALIMSHSDDNGLVLPPKLAPYQVVIIPIYRNEEQLAQIDEKATQI 327

Query: 572 ANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
              L++  +S++ D   N+   +K  E+ +K IP+ +  G ++    +I I R  + T +
Sbjct: 328 TQALRAKGISVKYDNSDNKKPGWKFAEYELKGIPVRLAMGARDLENNTIEIARRDTLTKE 387

Query: 631 KVSLL---DAIPILTKE 644
            V L    + +  L  +
Sbjct: 388 TVGLDGIEETVATLLDD 404


>gi|226498392|ref|NP_001147898.1| bifunctional aminoacyl-tRNA synthetase [Zea mays]
 gi|195614460|gb|ACG29060.1| bifunctional aminoacyl-tRNA synthetase [Zea mays]
          Length = 693

 Score =  159 bits (401), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 79/414 (19%), Positives = 153/414 (36%), Gaps = 59/414 (14%)

Query: 233 QYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DY 291
           + ++   E     +  +  + DL     D SG        + I++++ S+   +IK    
Sbjct: 200 KIMHKKNERFSDWYTDVIVKGDLIEY-YDVSGCYILRPWAYGIWESIQSFFDAEIKKLGV 258

Query: 292 EEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH 350
           E    P  + Q    ++  H + + A +  V    DT       A++P +       ++ 
Sbjct: 259 ENAYFPIFVSQKALNKEKAHVEGFSAEVAWVTKYSDTDL-AEPVAIRPTSETIMYNAYSK 317

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN-ECLKIHN 409
            + S+R+LP++L ++ +V R E S      +R R F   + H     E+  + +   I  
Sbjct: 318 WISSHRDLPLKLNQWTNVVRWEFSSPT-PFIRTREFLWQEGHTAHATEKEADEQTYAILE 376

Query: 410 LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL 469
           L   +Y+                                    + +       + T    
Sbjct: 377 LYRRVYE------------------------------------EVLAVPVIKGVKTESEK 400

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
             G  Y    E  +++  GR  Q  T   +  N    FN  Y++  +EK     + +  +
Sbjct: 401 FAGGHYTTTVEAYIQE-NGRAVQSATSHNLGENFAKMFNIQYLDEKNEKK---WVWQTSW 456

Query: 529 GSIERFIGIMIENFKGNLPLWLSP----IQAIVTTITSSAVE------YAQEIANLLKSH 578
           G   R IGIMI     +  L L P    +QA++  +     E       A+E+   L   
Sbjct: 457 GLTTRSIGIMIMVHGDDQGLVLPPRIAKVQAVIIPVIFKDSEKGKLDAKAKELEEELAKA 516

Query: 579 HLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIG-IRRFGSTTTQ 630
            + ++ D R N +  +K     +K +P+ I  G K+  +  +  ++RF  + +Q
Sbjct: 517 GVRVKIDDRTNYSPGWKYNHWELKGVPLRIELGPKDLEKGEVRLVKRFDGSKSQ 570


>gi|213961830|ref|ZP_03390096.1| prolyl-tRNA synthetase [Capnocytophaga sputigena Capno]
 gi|213955619|gb|EEB66935.1| prolyl-tRNA synthetase [Capnocytophaga sputigena Capno]
          Length = 492

 Score =  159 bits (401), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 70/442 (15%), Positives = 165/442 (37%), Gaps = 73/442 (16%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
           +++ L    E   + + +L  + DL   +     ++     G+ I++ + + + R  K+ 
Sbjct: 1   MSKNLTSRSEDYSKWYNELVVKADLAESSGVRGCMVI-KPYGYAIWEKMQAELDRMFKET 59

Query: 290 DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCA--------------DDTIKDLRTF 334
            +     P  + +  ++ +  + + +      V                 D   K     
Sbjct: 60  GHTNAYFPLFVPKSYFEAEEKNAEGFAKECAVVTHYRLKTDPNEKGKLIVDPEAKLEEEL 119

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV- 393
            ++P +     + + + ++SYR+LP+ + ++ +V R E        +R   F   + H  
Sbjct: 120 IVRPTSEAIIWSTYKNWIQSYRDLPILINQWANVVRWEMR--TRLFLRTAEFLWQEGHTA 177

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
             TK +   E  K+ N+  +  ++F    ++  L T  E+  G+D  +            
Sbjct: 178 HATKAEALEEAEKMMNVYATFVENFMAVPVIKGLKTESERFAGADETF------------ 225

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVN 512
                                     E +++D  G+  Q GT   +  N    F   Y  
Sbjct: 226 ------------------------CIEAMMQD--GKALQAGTSHFLGQNFAKAFEVKYAT 259

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTIT------S 562
              ++ +   +  + +G   R +G +I    ++    LP  L+PIQ ++  I        
Sbjct: 260 KEGKQEY---VWASSWGVSTRLMGALIMTHSDDNGLVLPPKLAPIQVVIVPIYKGEEQLE 316

Query: 563 SAVEYAQEIANLLKSHHLSIETDFRN-ETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
               + Q +   LK   +S++ D R+ ++  +K  E+ +K +P+ +  G ++    +  +
Sbjct: 317 KVRTHIQPLVEELKKRGISVKFDDRDTQSPGFKFHEYELKGVPVRLAVGQRDIENNTFEV 376

Query: 622 RRFGSTTTQKVSLLDAIPILTK 643
            R  + T + V+    +  + +
Sbjct: 377 ARRDTLTKETVTGDQIVAHIQQ 398


>gi|332140465|ref|YP_004426203.1| prolyl-tRNA synthetase [Alteromonas macleodii str. 'Deep ecotype']
 gi|226731424|sp|B4RV73|SYP_ALTMD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|327550487|gb|AEA97205.1| prolyl-tRNA synthetase [Alteromonas macleodii str. 'Deep ecotype']
          Length = 572

 Score =  159 bits (401), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 63/295 (21%), Positives = 117/295 (39%), Gaps = 15/295 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L        ++E   H+ + R   +  +A   SG+  W   G ++   + + +R 
Sbjct: 3   TSQYLLATQKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPSGLRVLNKVANIVRE 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LW++SG W+ Y   +  VK      +  R F L P +    
Sbjct: 60  EMNKAGAIEVLMPVVQPADLWEESGRWEEYGPELLRVKD-----RHQRDFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
            A+  + + SY++LP+ L +  + +R+E      G+MR R FT  DA+ F  ++    E 
Sbjct: 115 TALVRNEISSYKQLPLNLYQVQTKFRDEVRPRF-GIMRGREFTMKDAYSFHLEDSCLEET 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             K+++   +I+   G +   V   +       S      AE+    +  +  +     +
Sbjct: 174 YQKMYDAYCAIFSRMGLDFRAVIADSGSIGGNHSHEFHVLAESGEDAIAFSSDSDYAANV 233

Query: 464 N--TGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE 516
                V   +    G   +   KDA G+D+      VD N  +      V   +E
Sbjct: 234 EMAAAVAPEKAVPSGA--DVETKDAKGKDFNAILKSVDANATNAVKVVLVKGANE 286



 Score = 71.7 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 56/167 (33%), Gaps = 14/167 (8%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           I R  + G I Q+        N   ++   +     M    +   + R +   IE     
Sbjct: 408 IKRGIEVGHIFQLGRKYSEAMNCGVLSETGKHQTLTMGCYGI--GVSRIVAAAIEQNHDK 465

Query: 546 LPL-WL---SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
             + W    +P +  +  +    +    E A+ +   L +  + +  D R E       +
Sbjct: 466 FGIKWPDPIAPFKIALIPMNMHKSHRIKEAAEALYEELVALGIEVLFDDRKERPGVMFND 525

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL---DAIPIL 641
             +  IP  I+ G++    + +  +   +   Q + L    + +  L
Sbjct: 526 MELIGIPHSIVIGERNLDNQQVEYKNRRTGEKQLLDLSAAKEFVAAL 572


>gi|32140557|dbj|BAC78195.1| prolyl-tRNA synthetase [Raphanus sativus]
          Length = 544

 Score =  159 bits (401), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 62/414 (14%), Positives = 143/414 (34%), Gaps = 60/414 (14%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
            +    Q +    +     +  +    +L         ++     G+ I++ +  Y+  K
Sbjct: 59  NRLRSDQAVTPRSQDFNAWYLDVIASAELADYGPVRGTMVI-RPYGYAIWEAIQDYLNVK 117

Query: 287 IKD-DYEEINTPQVLDQHL-WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
            K+  +  +  PQ +      +++ H + +   +  V        + +   ++P +    
Sbjct: 118 FKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTVGGGHELEEK-LVVRPTSETIV 176

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNE 403
             +F   + SYR+LP+ + ++ +V R E        +R   F   + H    T E+   E
Sbjct: 177 NHMFTQWIHSYRDLPLMINQWANVTRWEMR--TKPFIRTLEFLWQEGHTAHATPEEAEKE 234

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             ++  +      +     ++    ++ E   G+D  +                      
Sbjct: 235 AKQMIEIYTRFAFEQTSIPVIAGRKSKLETFAGADTTY---------------------- 272

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVM 522
                           E ++ D   +  Q GT   +  N    F   + + + E+ H   
Sbjct: 273 --------------TIEAMMGDR--KALQAGTSHNLGQNFSRAFGTQFQDENGERQH--- 313

Query: 523 IHRAVFGSIERFIGIMIENFKGNL----PLWLSPIQAIVTTITSSAVEY------AQEIA 572
           + +  +    RF+G +I     +     P  ++PIQ ++  I     E       A  + 
Sbjct: 314 VWQTSWAVSTRFVGGIIMTHGDDTGLMLPPKIAPIQVVIVPIWKKDTEKTQVLSAASSVK 373

Query: 573 NLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
            +L++  + ++ D   E T  +K     +K +PI I  G ++ S   + + R  
Sbjct: 374 EVLQTAGVRVKLDDTTERTAGWKFNFWEMKGVPIRIEIGPRDVSSNCVVVSRRD 427


>gi|327405532|ref|YP_004346370.1| prolyl-tRNA synthetase [Fluviicola taffensis DSM 16823]
 gi|327321040|gb|AEA45532.1| prolyl-tRNA synthetase [Fluviicola taffensis DSM 16823]
          Length = 491

 Score =  159 bits (401), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 69/433 (15%), Positives = 157/433 (36%), Gaps = 72/433 (16%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
           ++Q      E   + +  L    DL     D  G++     G+ I++ +   +  K K+ 
Sbjct: 1   MSQKYATRAEDYSKWYNDLISRADLAE-HSDVKGMMVIKPYGYAIWENMRDILDAKFKET 59

Query: 290 DYEEINTPQVLDQH-LWQQSGHWDSYRANMFAVKCA-------------DDTIKDLRTFA 335
            ++    P ++ +  L +++ H + +      V                D + K      
Sbjct: 60  GHQNAYFPLLIPKSYLSKEASHIEGFAKECAVVTHYRLMSDPNGGGVIVDPSAKLEEELI 119

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-F 394
           ++P +       +   ++SYR+LP+ + ++ +V R E        +R   F   + H   
Sbjct: 120 VRPTSETIIWNSYKKWIQSYRDLPILINQWANVVRWEMK--TRLFLRTSEFLWQEGHTAH 177

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDT 454
            TKE+   E  ++ ++     + +    ++    T  E+  G+D  +             
Sbjct: 178 ATKEEAIKETEQMLDVYAEFAETYMAMPVIKGHKTESERFAGADDTY------------- 224

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNS 513
                                    E +++D  G+  Q GT   +  N    F+  Y ++
Sbjct: 225 -----------------------CIESMMQD--GKALQAGTSHFLGQNFAKAFDVKYSDA 259

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSS------ 563
             +  +   +    +G   R +G +I    ++    LP  L+PIQ ++  I  +      
Sbjct: 260 QGKLEY---VWATSWGVSTRLMGALIMTHSDDEGLVLPPALAPIQVVIVPIYRTDEELQL 316

Query: 564 AVEYAQEIANLLKSHHLSIETDFRN-ETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
             +   +I   LK   + ++ D  + +   +K  EH  K +P+ +  G ++ +   + I 
Sbjct: 317 INDAVAKITAELKDLKVKVKYDSDDQKRPGWKFAEHEAKGVPVRLAIGPRDLANGVVEIA 376

Query: 623 RFGSTTTQKVSLL 635
           R  +     +++ 
Sbjct: 377 RRDTKEKYAMNID 389


>gi|297817558|ref|XP_002876662.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297322500|gb|EFH52921.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 522

 Score =  159 bits (401), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 67/416 (16%), Positives = 145/416 (34%), Gaps = 61/416 (14%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTP----QV 299
             + ++ ++  +     D SG          I++ +  +   +IK    ++        V
Sbjct: 52  DWYSEVCKQDMI--EYYDISGCYILRPWSMAIWEIMQIFFDAEIKK--MKVKNCYFPLFV 107

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L ++  H + +   +  V  +  +  ++   A++P +       ++  ++ +R+LP
Sbjct: 108 SPAVLEKEKDHIEGFAPEVAWVTKSGKSDLEI-PIAIRPTSETVMYPYYSKWIRGHRDLP 166

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDF 418
           ++L ++ +V R E S      +R R F   + H  F TK +   E L+I  L   IY+  
Sbjct: 167 LKLNQWCNVVRWEFSNPT-PFIRSREFLWQEGHTAFATKAEADEEVLQILELYRRIYE-- 223

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
                                             + +       + +      G  Y   
Sbjct: 224 ----------------------------------EYLAVPVVKGMKSENEKFAGGLYTTS 249

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E  + +  GR  Q  T        ++   F +N  +EK    M+ +  +    R IG+M
Sbjct: 250 VEAFIPNT-GRGVQGATSHCLGQNFAK--MFEINYENEKAETAMVWQNSWAYSTRTIGVM 306

Query: 539 IENFKGNLPLWLSP----IQAIVTTI------TSSAVEYAQEIANLLKSHHLSIETDFRN 588
           I     +  L L P    +Q +V  +      T    +     A+ L    +  E D R+
Sbjct: 307 IMTHGDDKGLVLPPKVASVQVVVIPVPYKDANTQGIYDACTATASALCEAGIRAEEDLRD 366

Query: 589 E-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             +  +K  +  +K +P+ I  G ++     +   R  +   + +     +  + +
Sbjct: 367 NYSPGWKYSDWEMKGVPLRIEIGPRDLENDQVRTVRRDNGVKEDIPRGSLVENVKE 422


>gi|26987940|ref|NP_743365.1| prolyl-tRNA synthetase [Pseudomonas putida KT2440]
 gi|81840777|sp|Q88NK2|SYP_PSEPK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|24982651|gb|AAN66829.1|AE016311_9 prolyl-tRNA synthetase [Pseudomonas putida KT2440]
          Length = 571

 Score =  159 bits (401), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 50/248 (20%), Positives = 98/248 (39%), Gaps = 11/248 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L        ++    H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLATQKETPADAVVISHQLMLRAGMIRKLA---SGLYTWLPMGLRVMRKVEAVVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P +    LWQ+SG W+ Y   +  +K      +  R F + P +    
Sbjct: 60  EMNAAGALEVLMPSIQPAELWQESGRWEQYGPELLRLKD-----RHQRDFCVGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+ L +  + +R+E      GLMR R F   DA+ F   +    E 
Sbjct: 115 TDLARNELSSYKQLPLNLYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSFHADQASLQET 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             ++H    +++   G +   V+  T       S      AE+    V+ +  +     I
Sbjct: 174 YDRMHQAYSNVFTRLGLDFRPVQADTGSIGGSYSHEFHVLAESGEDDVIFSDSSDYAANI 233

Query: 464 NTGVLLGE 471
                +  
Sbjct: 234 EKAEAIPR 241



 Score = 84.1 bits (206), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 64/177 (36%), Gaps = 14/177 (7%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
           P  +      I R  + G I Q+            +  + +   PV++    +G  + R 
Sbjct: 393 PSPDGQGTLVIKRGIEVGHIFQLGTKYSEALKCQVLGENGK---PVVLSMGCYGIGVSRV 449

Query: 535 IGIMIE-NFKGNLPLW---LSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFR 587
           +   IE ++     +W   L+P Q  +  +   T    E   ++   L +    +  D R
Sbjct: 450 VAAAIEQSYDDKGIIWNDALAPFQIALVPLRYETDVVREATDKLYAELTAAGYEVLLDDR 509

Query: 588 NET--INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           ++      K  +  +  IP  I+  D+  +E ++  +       Q + L + +  L 
Sbjct: 510 DKKTSPGIKFADMELIGIPHRIVVSDRGLAEGNLEYKHRTEQDAQALPLNEVLTFLQ 566


>gi|148546477|ref|YP_001266579.1| prolyl-tRNA synthetase [Pseudomonas putida F1]
 gi|166980143|sp|A5VZT5|SYP_PSEP1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|148510535|gb|ABQ77395.1| prolyl-tRNA synthetase [Pseudomonas putida F1]
          Length = 571

 Score =  159 bits (401), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 50/248 (20%), Positives = 98/248 (39%), Gaps = 11/248 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L        ++    H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLATQKETPADAVVISHQLMLRAGMIRKLA---SGLYTWLPMGLRVMRKVEAVVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P +    LWQ+SG W+ Y   +  +K      +  R F + P +    
Sbjct: 60  EMNAAGALEVLMPSIQPAELWQESGRWEQYGPELLRLKD-----RHQRDFCVGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+ L +  + +R+E      GLMR R F   DA+ F   +    E 
Sbjct: 115 TDLARNELSSYKQLPLNLYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSFHADQASLQET 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             ++H    +++   G +   V+  T       S      AE+    V+ +  +     I
Sbjct: 174 YDRMHQAYSNVFTRLGLDFRPVQADTGSIGGSYSHEFHVLAESGEDDVIFSDSSDYAANI 233

Query: 464 NTGVLLGE 471
                +  
Sbjct: 234 EKAEAIPR 241



 Score = 83.3 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 64/177 (36%), Gaps = 14/177 (7%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
           P  +      I R  + G I Q+            +  + +   PV++    +G  + R 
Sbjct: 393 PSPDGQGTLVIKRGIEVGHIFQLGTKYSEALKCQVLGENGK---PVVLSMGCYGIGVSRV 449

Query: 535 IGIMIE-NFKGNLPLW---LSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFR 587
           +   IE ++     +W   L+P Q  +  +   T    E   ++   L +    +  D R
Sbjct: 450 VAAAIEQSYDDKGIIWNDALAPFQIALVPLRYETEVVREATDKLYAELTAAGFEVLLDDR 509

Query: 588 NET--INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           ++      K  +  +  IP  I+  D+  +E ++  +       Q + L + +  L 
Sbjct: 510 DKKTSPGIKFADMELIGIPHRIVVSDRGLAEGNLEYKHRTEQDAQALPLNEVLTFLQ 566


>gi|37359720|dbj|BAC97834.1| glutamyl-prolyl-tRNA synthetase [Oryzias latipes]
          Length = 587

 Score =  159 bits (401), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 71/436 (16%), Positives = 147/436 (33%), Gaps = 60/436 (13%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
             +Q         EE+    + ++  + ++     D SG        + I++ +  +  +
Sbjct: 83  PKKQTRLGLEAKKEENLADWYSQVITKAEMIEY-YDVSGCYVLRPWSYSIWEAIKDFFDK 141

Query: 286 KIKD-DYEEINTPQVLD-QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPG 343
           +IK    E    P  +    L ++  H   +   +  V  +  T       A++P +   
Sbjct: 142 EIKKLGVENCYFPMFVSQAALEKEKTHIADFAPEVAWVTRSGKTEL-AEPIAVRPTSETV 200

Query: 344 HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFN 402
               +   ++S+R+LP++L ++ ++ R E        +R R F   + H  F TKE+   
Sbjct: 201 MYPAYAKWVQSHRDLPIKLNQWCNIVRWEFKHP-QPFLRTREFLWQEGHTAFATKEEATE 259

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
           E ++I +L   IY++     ++    T  EK  G D                        
Sbjct: 260 EVMQILDLYARIYEELLAIPVVKGRKTEKEKFAGGD------------------------ 295

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
                       Y    E     A GR  Q  T        S+                +
Sbjct: 296 ------------YTTTVE-AFISASGRAIQGATSHHLGQNFSKMFEIVFEDPKRPGEKQL 342

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTTIT----------SSAVEYA 568
             +  +G   R IG++      N+ L L P    +Q ++               + +   
Sbjct: 343 AFQNSWGITTRTIGVLTMVHGDNMGLVLPPRVACVQVVIIPCGITASLPEQEKEALLAQC 402

Query: 569 QEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERS-IGIRRFGS 626
            +    L    + +++DFR+  +  +K     +K +P+ +  G K+  ++  + +R   S
Sbjct: 403 SKYLKRLLDAGVRVKSDFRDNYSPGWKFNHWELKGVPVRLEVGPKDMQQKQCVAVR-RDS 461

Query: 627 TTTQKVSLLDAIPILT 642
                +   +    L 
Sbjct: 462 GAKITLPEGEVEKRLV 477


>gi|121997498|ref|YP_001002285.1| prolyl-tRNA synthetase [Halorhodospira halophila SL1]
 gi|152112924|sp|A1WUX1|SYP_HALHL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|121588903|gb|ABM61483.1| prolyl-tRNA synthetase [Halorhodospira halophila SL1]
          Length = 568

 Score =  159 bits (401), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 53/250 (21%), Positives = 98/250 (39%), Gaps = 15/250 (6%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           T+  L+       ++E   H+ + R   +  ++   SG+  W   G ++ Q +   +R +
Sbjct: 4   TRFPLSTTRETPADAEIVSHQLMLRAGMIRRLS---SGLYTWLPLGLRVLQKVERIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P V    LWQ+SG W+ Y   +  ++   D     R     P +     
Sbjct: 61  MNRAGALEVLMPAVQPAELWQESGRWEKYGPELLRIRDRHD-----REGCFGPTHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN-EC 404
            +F   ++SYR+LPV   +  + +R+E      G+MR R F   DA+ F   +     E 
Sbjct: 116 DLFRREIRSYRQLPVNYYQIQTKFRDEIRPRF-GVMRAREFLMKDAYSFHLDDDDLRAEY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALW---DDAENIMKGVLDTIKNSSQD 461
            ++H     I++  G     V+  T       S       D  E+ +  V +    ++  
Sbjct: 175 QRMHEAYCRIFQRTGLAFRPVEADTGAIGGSVSHEFMVLADSGEDAI-AVCEASGYAANV 233

Query: 462 RINTGVLLGE 471
            +   V   E
Sbjct: 234 ELAPAVAPTE 243



 Score = 79.4 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 25/165 (15%), Positives = 53/165 (32%), Gaps = 8/165 (4%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
            + R  + G I Q+         A  ++   ++   V +     G        + +N   
Sbjct: 402 TLRRGIEVGHIFQLGTTYSEAMGASVLDEQGQERT-VTMGCYGIGVSRVVAAAIEQNHDD 460

Query: 545 NLPLWLSPI---QAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
               W +PI   Q  +  I     +  E A+ +   L +  + +  D R+     K  + 
Sbjct: 461 RGICWPAPIAPFQVALVAIKAEDPAVAEAAEALYADLTASGIDVLYDDRDARPGVKFADM 520

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +  IP  ++   +   E S+  +         V   + +  L  
Sbjct: 521 ELIGIPHRVVVSPRAIQEGSVEYKGRQDADPTHVPRAEIVTWLKN 565


>gi|297564570|ref|YP_003683542.1| prolyl-tRNA synthetase [Meiothermus silvanus DSM 9946]
 gi|296849019|gb|ADH62034.1| prolyl-tRNA synthetase [Meiothermus silvanus DSM 9946]
          Length = 477

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 70/420 (16%), Positives = 147/420 (35%), Gaps = 60/420 (14%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
             E     + ++  + DL         ++     G+ +++ L   + R+ K+  +     
Sbjct: 10  QSEDFNEWYNEVVLKADLVDYGPVRGTMVI-KPYGYALWEGLQRELDRRFKETGHHNAYF 68

Query: 297 PQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P  +    + +++ H + +   +  V  A     +    A++P +      ++   +KSY
Sbjct: 69  PLFIPMSFFQKEAEHVEGFAPELAVVTHAGGEELE-EPLAVRPTSETIIGHMWASWIKSY 127

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           R+LP  L ++ SV R E        +R   F   + H     ++   E  +    I +  
Sbjct: 128 RDLPQLLNQWNSVVRWELR--TKLFLRTSEFLWQEGHTAHATQEEAEEETRRMLDIYATV 185

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                                              + +       +   T      GA Y
Sbjct: 186 -----------------------------------LREYAAVPGWEGRKTESEKFAGAEY 210

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSR-FNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
              +E +++D  G+  Q  T        SR F   + +   +  +    +   +G   R 
Sbjct: 211 TLTYEAMMRD--GKALQSCTSHYFGQKFSRAFEIKFQDKDLQTKYA---YTTSWGFSTRA 265

Query: 535 IGIMIENFKGN----LPLWLSPIQAIVTTITSS-----AVEYAQEIANLLKSHHLSIETD 585
           IG ++     +    LP  L+PIQ +V  I         +  A+ +A  LK+  + +  D
Sbjct: 266 IGAIVMTHGDDKGLILPPKLAPIQVVVVPIYKEDTRAKVLAAAEGLAQALKAAGIRVHLD 325

Query: 586 FRNE-TINYKIREHSIKKIPIIIICGDKEASERS-IGIRRFGSTTTQKVSLLDAIPILTK 643
            R++ +  +K  E  +K +P  +  G ++   ++ +   R G   T  V + +  P L  
Sbjct: 326 DRDQYSPGFKFNEWELKGVPFRLELGPRDVDAQTAVLASRLGGKET--VPMEEIAPTLAD 383


>gi|256424918|ref|YP_003125571.1| prolyl-tRNA synthetase [Chitinophaga pinensis DSM 2588]
 gi|256039826|gb|ACU63370.1| prolyl-tRNA synthetase [Chitinophaga pinensis DSM 2588]
          Length = 493

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 66/447 (14%), Positives = 160/447 (35%), Gaps = 77/447 (17%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
           +++ +    E   + +  L  +  L   +     ++     G+ +++ +   +  K K+ 
Sbjct: 1   MSKEITARSEDYSQWYNDLIIKGGLADYSAVRGCMVI-KPYGFGLWEGMRDVLDAKFKET 59

Query: 290 DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCA---------------DDTIKDLRT 333
            ++    P  + +    +++ H D +      V                  D   K    
Sbjct: 60  GHQNAYFPLFIPKSFLSKEAEHVDGFAKECAVVTHHRLMQNPDPNVKGLVVDPEAKLEEE 119

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
             ++P +       +   ++SYR+LP+ + ++ +V R E        +R   F   + H 
Sbjct: 120 LIVRPTSETIIWNTYKDWIQSYRDLPLLINQWANVVRWEMR--TRLFLRTAEFLWQEGHT 177

Query: 394 -FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
              T E+   E  ++  +     +++    ++  + +  E+  G                
Sbjct: 178 AHATAEEAIAETRQMLEVYADFAENYMALPVVRGVKSPAERFAG---------------- 221

Query: 453 DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYV 511
                               A      E +++D  G+  Q GT   +  N    F+  + 
Sbjct: 222 --------------------ALDTYCIEALMQD--GKALQAGTSHFLGQNFAKAFDVKFS 259

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVEY 567
           N  +++ +   +    +G   R IG ++    ++    LP  ++P+Q ++  I     + 
Sbjct: 260 NKENKQEY---VWATSWGVSTRLIGALVMAHSDDDGLVLPPRIAPLQVVIVPIYKGEEQK 316

Query: 568 AQ------EIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIG 620
           ++      EI + LK   + ++ D  +     +K  E+ +K +P+ I  G ++       
Sbjct: 317 SKIDAKVDEIISGLKKLGIRVKYDDSDNARPGWKFAEYEMKGVPVRIALGARDLENNVAE 376

Query: 621 IRRFGSTTTQKVSLL---DAIPILTKE 644
           + R  + T + +SL    + I  L +E
Sbjct: 377 VARRDTKTKESLSLDGLAERISALLEE 403


>gi|163786094|ref|ZP_02180542.1| prolyl-tRNA synthetase [Flavobacteriales bacterium ALC-1]
 gi|159877954|gb|EDP72010.1| prolyl-tRNA synthetase [Flavobacteriales bacterium ALC-1]
          Length = 492

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 73/441 (16%), Positives = 163/441 (36%), Gaps = 73/441 (16%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
           +++ L    E   + + +L  + DL   +     ++     G+ I++ + + + R  K+ 
Sbjct: 1   MSKNLTNRAEDYSKWYNELVVKADLAENSAVRGCMVI-KPYGYAIWEKMQAELDRMFKET 59

Query: 290 DYEEINTPQVLDQHLWQ-----------QSGHWDSYRANMFAVKCA----DDTIKDLRTF 334
            +     P  + + L++           +      YR      K      D   K     
Sbjct: 60  GHVNAYFPLFVPKSLFEAEEKNAEGFAKECAVVTHYRLENDPDKEGKLRVDPNAKLEEEL 119

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV- 393
            ++P +       +   ++SYR+LP+ + ++ +V R E        +R   F   + H  
Sbjct: 120 IVRPTSEAIIWNTYKGWIQSYRDLPILINQWANVVRWEMR--TRLFLRTAEFLWQEGHTA 177

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
             TK +   E  +++N+     ++F    ++  + T  E+  G++  +            
Sbjct: 178 HATKVEALEEAEQMNNVYAEFAENFMAIPVIKGVKTESERFAGAEETF------------ 225

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVN 512
                                     E +++D  G+  Q GT   +  N    F+  + N
Sbjct: 226 ------------------------CIEALMQD--GKALQAGTSHFLGQNFAKAFDVKFTN 259

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVEY- 567
           +  +  H   +    +G   R +G +I    ++    LP  L+P Q ++  I  +  ++ 
Sbjct: 260 NEGKLDH---VWATSWGVSTRLMGALIMTHSDDKGLVLPPNLAPFQVVIVPIYKNDEQFD 316

Query: 568 -----AQEIANLLKSHHLSIETDFRN-ETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
                A  I+  LK+  +S + D R+      K  +H ++ +P+ I  G K+    ++ +
Sbjct: 317 LISKKANTISKELKALGVSCKFDKRSTHRPGAKFAQHELQGVPLRIAIGPKDLENNTVEL 376

Query: 622 RRFGSTTTQKVSLLDAIPILT 642
            R  + T + V + D    + 
Sbjct: 377 ARRDTLTKEIVQMDDLTQTIK 397


>gi|19112749|ref|NP_595957.1| mitochondrial proline-tRNA ligase (predicted) [Schizosaccharomyces
           pombe 972h-]
 gi|74676105|sp|O74765|SYPM_SCHPO RecName: Full=Probable prolyl-tRNA synthetase, mitochondrial;
           AltName: Full=Proline--tRNA ligase; Short=ProRS; Flags:
           Precursor
 gi|3687477|emb|CAA21147.1| mitochondrial proline-tRNA ligase (predicted) [Schizosaccharomyces
           pombe]
          Length = 425

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 61/398 (15%), Positives = 135/398 (33%), Gaps = 46/398 (11%)

Query: 254 DLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWD 312
           D+  I     G+  +   G ++   +   +   ++      I+   +  + +W++SG W 
Sbjct: 33  DMGFIQPSMPGIFQYLPLGLRVQNKICDLLHISMRSLGASAISLAHLSSKEIWEKSGRWQ 92

Query: 313 SYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE 372
              + +F +   +D     R   L P +           + S ++LP+R+ + G  +R+E
Sbjct: 93  KTGSELFRLHDRND-----REMCLAPTHEEDVTRTMATIIDSQKQLPIRVYQIGRKFRDE 147

Query: 373 PSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDFGFEKIMVKLSTRP 431
                 GL+R R F   D + F   +    +  + +     + +K+ G   +MVK +T  
Sbjct: 148 LRPR-GGLLRGREFMMKDLYTFDIDKASAMKTYEDVLQAYHTFFKEVGLPFVMVKAATGN 206

Query: 432 EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDW 491
                S                             +       Y    E +       D 
Sbjct: 207 IGGNLSHEFHYRHPVG----------------EDVIYTCPSCHYSTNSEMLDLSKTSSDI 250

Query: 492 QCG------------TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIM 538
            C              +   F L   +++ +  +   K    ++H   +G  + R I  +
Sbjct: 251 SCPNCNDQLTSTTAIEVGHAFYLGKIYSSKFNATVEVKNKQEVLHMGCYGIGVSRLIAAV 310

Query: 539 ----IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSH-HLS-IETDFRNET-I 591
                +      P  ++P + +V   + + ++ A+ + +   +      +  + R     
Sbjct: 311 AHVTKDAKGLVWPSSIAPWKVLVVPTSDNHIQSAETVYDATANVVGFDNVLLEDRQNRAF 370

Query: 592 NYKIREHSIKKIPIIIICGDKEASER--SIGIRRFGST 627
            YK+R+  +   P +I+ G +   E    I +R  G  
Sbjct: 371 GYKMRDAELIGYPFVIVVGSRFQEEGICEIIVRSSGER 408


>gi|291320056|ref|YP_003515314.1| prolyl tRNA synthetase [Mycoplasma agalactiae]
 gi|290752385|emb|CBH40356.1| Prolyl tRNA synthetase (Proline tRNA ligase) [Mycoplasma
           agalactiae]
          Length = 478

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 68/418 (16%), Positives = 153/418 (36%), Gaps = 58/418 (13%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD--YEEIN 295
           LE    + +  + ++ +L         +  +    + I++ +   +  +I      + + 
Sbjct: 10  LELDFAKWYTDVVKQGNLIEYGPVKGTL-IFKPNSYGIWEQIQKVL-NEIFRGLKVQNVY 67

Query: 296 TPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
            P  +   L  ++  H   +   +  +    D   D + + ++P +      +F   + S
Sbjct: 68  LPLFIPDRLLAKEKEHIAGFNPELATITKVGDKELDQKIY-VRPTSEVLFADLFKKMIVS 126

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           +++LP+   ++ +V R E   + +  +R R F   + H   T  +   E  K+   +I++
Sbjct: 127 HKDLPILYNQWANVVRWEK--TTNPFLRSREFLWQEGH---TCHKSAIEARKLTREMINV 181

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           Y  F                             +K  L  I      +       G  + 
Sbjct: 182 YAKF-----------------------------LKNYL-AIPTIIGKKTPYEKFAGACST 211

Query: 475 YGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           Y    E ++KD  G+  Q GT      N   +F   + N  +E      +++  +G   R
Sbjct: 212 YT--VEAMMKD--GKALQAGTSHYLAQNFSKKFEISFKNDKNEDE---FVYQTSWGVSTR 264

Query: 534 FIGIMIENFKGN----LPLWLSPIQAIVTTIT----SSAVEYAQEIANLLKSHHLSIETD 585
            +G +I     N    +P  ++P+Q  +  +         ++  E+A  L+     +  D
Sbjct: 265 LLGAIIMTHGDNRGIIIPPKVAPVQVDILELFANKQPKVHDFCNELAKQLERK-FRVRLD 323

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             +++  YK     I+ +P+ I  G K+   +++ I R  +     VS+ D    + +
Sbjct: 324 STDKSPGYKASNSEIQGVPLRIEVGPKDLENKTVTIVRRDTLEKTMVSVSDVKSKVRE 381


>gi|313497556|gb|ADR58922.1| ProS [Pseudomonas putida BIRD-1]
          Length = 571

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 50/248 (20%), Positives = 98/248 (39%), Gaps = 11/248 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L        ++    H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLATQKETPADAVVISHQLMLRAGMIRKLA---SGLYTWLPMGLRVMRKVEAVVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P +    LWQ+SG W+ Y   +  +K      +  R F + P +    
Sbjct: 60  EMNAAGALEVLMPSIQPAELWQESGRWEQYGPELLRLKD-----RHQRDFCVGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+ L +  + +R+E      GLMR R F   DA+ F   +    E 
Sbjct: 115 TDLARNELSSYKQLPLNLYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSFHADQASLQET 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             ++H    +++   G +   V+  T       S      AE+    V+ +  +     I
Sbjct: 174 YDRMHQAYTNVFTRLGLDFRPVQADTGSIGGSYSHEFHVLAESGEDDVIFSDSSDYAANI 233

Query: 464 NTGVLLGE 471
                +  
Sbjct: 234 EKAEAIPR 241



 Score = 84.1 bits (206), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 64/177 (36%), Gaps = 14/177 (7%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
           P  +      I R  + G I Q+            +  + +   PV++    +G  + R 
Sbjct: 393 PSPDGQGTLVIKRGIEVGHIFQLGTKYSEALKCQVLGENGK---PVVLSMGCYGIGVSRV 449

Query: 535 IGIMIE-NFKGNLPLW---LSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFR 587
           +   IE ++     +W   L+P Q  +  +   T    E   ++   L +    +  D R
Sbjct: 450 VAAAIEQSYDDKGIIWNDALAPFQIALVPLRYETDVVREATDKLYAELTAAGYEVLLDDR 509

Query: 588 NET--INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           ++      K  +  +  IP  I+  D+  +E ++  +       Q + L + +  L 
Sbjct: 510 DKKTSPGIKFADMELIGIPHRIVVSDRGLAEGNLEYKHRTEQDAQALPLNEVLTFLQ 566


>gi|310641589|ref|YP_003946347.1| prolyl-tRNA synthetase [Paenibacillus polymyxa SC2]
 gi|309246539|gb|ADO56106.1| Prolyl-tRNA synthetase [Paenibacillus polymyxa SC2]
          Length = 482

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 70/431 (16%), Positives = 163/431 (37%), Gaps = 59/431 (13%)

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR 284
            +  ++  + +    E   R +  + ++ +L   +    G I +   G++I++ +   M 
Sbjct: 1   MSNDKQFVEEITPQSEDFSRWYIDVIKKAELMDYSPVR-GCIVFRPDGFEIWEHIKEAMD 59

Query: 285 RKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
            + ++  +     P  + +  + ++  H + +   +  V  A     + R  A++P +  
Sbjct: 60  VRFRETGHRNAYFPMFIPESFFQKEKEHVEGFNPELPWVTEAGGEKLEER-LAIRPTSET 118

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMF 401
               +++  ++SYR+LPV + ++ +V R E        +R   F   + H    T+E+  
Sbjct: 119 MIGHMYSKWIQSYRDLPVLINQWANVVRWEKR--TLPFLRTSEFLWQEGHTAHETEEEAR 176

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E +K+  +   + ++     ++    T  EK  G                         
Sbjct: 177 EETMKMLEVYREVIEEVLAIPVITGQKTPSEKFAG------------------------- 211

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHP 520
                      A      E +++D  GR  Q GT      N    F+  Y++  +     
Sbjct: 212 -----------AKDTFSLEAMMRD--GRAVQAGTSHYMGTNFAVAFDIKYLSRENNLE-- 256

Query: 521 VMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTIT-----SSAVEYAQEI 571
              H   +G+  R IG +I    ++    LP  ++P Q I+  I       + +  A E+
Sbjct: 257 -FAHTTSWGTSTRLIGALIMVHGDDRGLALPPKVAPTQVIMVPIGPPKKRDAVIARADEL 315

Query: 572 ANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
              LK   + ++ D R++ +  +K  E+ ++ +P+ +  G ++       +    S   +
Sbjct: 316 FAELKQAGVRVKMDDRSDVSPGWKFNEYEMRGVPVRLEIGPRDMENGVCVLVSRISGEKK 375

Query: 631 KVSLLDAIPIL 641
            V   + +  +
Sbjct: 376 IVQQDNLLEEV 386


>gi|289450634|ref|YP_003474779.1| proline--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5]
 gi|289185181|gb|ADC91606.1| proline--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5]
          Length = 483

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 68/436 (15%), Positives = 154/436 (35%), Gaps = 61/436 (13%)

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR 284
               ++L + +   +    + +  +  + +L   +    G +     G+ I++ +   + 
Sbjct: 1   MAKDKKLVEQITARDVDFAQWYTDIVTKAELADYS-CVRGCMVIRPYGYAIWENMKQDLD 59

Query: 285 RKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
           R+ K   +E +  P  + + L  ++  H   +   +  V    D +   R   ++P +  
Sbjct: 60  RRFKATGHENVAMPMFIPESLLQKEKDHVQGFAPEVAWVTHGGDALLPER-LCVRPTSET 118

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMF 401
                +   ++SYR+LP    ++ SV R E   +    +R   F   + H    T E+  
Sbjct: 119 LFCDHYARIIQSYRDLPKLYNQWCSVVRWEK--TTRPFLRTMEFFWQEGHTVHETAEEAI 176

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E  ++ N+     ++     ++    T  EK  G++  +                    
Sbjct: 177 AETERMLNVYADFLREVLAIPVIKGRKTDKEKFAGAEMTY-------------------- 216

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHP 520
                             E ++ D  G+  Q GT           F   + +  ++  + 
Sbjct: 217 ----------------TVEALMHD--GKALQSGTSHYFGDGFARAFGIQFSDRENKLQY- 257

Query: 521 VMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIAN 573
              H   +G   R IG MI    ++    LP  ++P+Q ++  I       +     + +
Sbjct: 258 --CHETSWGMSTRVIGAMIMVHSDDSGLVLPPRVAPVQIMLIPIAMHKDGVLPAVFALRD 315

Query: 574 LLKSH--HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
            L+       ++ D  ++   +K  E  ++ IP+ +  G ++  + S+   R  +     
Sbjct: 316 RLQKASYGFRVKVDASDKMPGWKFSEQEMRGIPLRLEMGPRDIEQGSVVAVRRDTGAKTI 375

Query: 632 VSL---LDAIPILTKE 644
           + L    DA+  L  E
Sbjct: 376 LPLEGIEDALAKLLDE 391


>gi|295667617|ref|XP_002794358.1| prolyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
 gi|226286464|gb|EEH42030.1| prolyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
          Length = 638

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 82/420 (19%), Positives = 156/420 (37%), Gaps = 67/420 (15%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRAN 317
            D SG        + I++T+ ++   KIK    +  + P  + + +  ++  H + + A 
Sbjct: 121 YDVSGCFILKPHSYFIWETIQTWFNDKIKKMGVKNCSFPLFVSEDVLNKEKDHIEGFAAE 180

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           +  V  A ++ K  R  A++P +       +   ++S+R+LP+RL ++ SV R E     
Sbjct: 181 VAWVTHAGNS-KLERKIAIRPTSETVMYPYYAKWIRSHRDLPLRLNQWNSVVRWEFKNP- 238

Query: 378 HGLMRVRGFTQDDAHVFCTKEQMFN-ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
              +R R F   + H     E     E L+I      +Y++     ++    T  EK  G
Sbjct: 239 QPFLRTREFLWQEGHTAHLTEAAAREEVLQILEHYAHVYEELLAVPVIRGQKTEKEKFAG 298

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
                                                 Y    E  +  A GR  Q GT 
Sbjct: 299 G------------------------------------LYTTTVEGYIP-ATGRGIQGGTS 321

Query: 497 Q-VDFNLPSRFNAFYVNSH---SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
             +  N    F     +      EK   + + +  +G   R IGIM+     +L L L P
Sbjct: 322 HGLGQNFSKMFGITVEDPSAKPDEKKPALHVWQNSWGLSTRTIGIMVMVHGDDLGLVLPP 381

Query: 553 ----IQAIVTTIT--------SSAVEYAQ--EIANLLKSHHLSIETDFRNETINYKIREH 598
               +Q ++  +           A  YA+   +A +++   + +E D R+ +  +K  + 
Sbjct: 382 RVADVQTVIIPVGITAKTTDKERASLYAEIDALAAVIEDAGVRVEVDKRDNSPGWKFNDW 441

Query: 599 SIKKIPIIIICGDKEASERSIGIRRF---GSTTTQKVSLLDA---IPILTKESLPPDCQK 652
            ++ IP+ +  G  E++   +   R    G      + + +    +P L  E++  D  K
Sbjct: 442 ELRGIPLRLEFGPGESAGHFVTTSRRDIPGKDGKSTIPIPELKTQVPALL-ETIQADLYK 500


>gi|303239635|ref|ZP_07326160.1| phosphoribulokinase/uridine kinase [Acetivibrio cellulolyticus CD2]
 gi|302592806|gb|EFL62529.1| phosphoribulokinase/uridine kinase [Acetivibrio cellulolyticus CD2]
          Length = 557

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 49/212 (23%), Positives = 97/212 (45%), Gaps = 2/212 (0%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           IK+T PDGS K      +  ++++          VA  +   + +LS  +   + IE I 
Sbjct: 9   IKVTLPDGSEKEVVEGISLLELSKDCKNDYKSTIVAAKVENDIKELSFHLYNSAHIEFID 68

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
             +   + + R S + ++ +AV  ++P+ +V I   I  G + + +     +++E+++IE
Sbjct: 69  LTNDDGMRIYRRSLSFVLIKAVHDLFPDRKVTISHSISKGIFCEINGATQLTAEEVSKIE 128

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           ++M+E+I +  PF+K+ +S ++A+E+F       +   +E    K  VT+Y    + D  
Sbjct: 129 ERMKELINQKIPFIKRIMSIDEAKEIFSKTGRIDRFRAIE-YRKKPYVTIYNCDGYEDYF 187

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRP 215
            G     TG + KF       G          
Sbjct: 188 YGYMTPDTGYLNKFALKFYAPGLILMYPEKTN 219


>gi|218131142|ref|ZP_03459946.1| hypothetical protein BACEGG_02747 [Bacteroides eggerthii DSM 20697]
 gi|317476982|ref|ZP_07936224.1| prolyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA]
 gi|217986662|gb|EEC52996.1| hypothetical protein BACEGG_02747 [Bacteroides eggerthii DSM 20697]
 gi|316906775|gb|EFV28487.1| prolyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA]
          Length = 497

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 68/438 (15%), Positives = 158/438 (36%), Gaps = 73/438 (16%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
              E+  + + +L  + DL   +     ++     G+ I++ +   +    K+  +    
Sbjct: 10  KRSENYSQWYNELVVKADLAEQSAVRGCMVI-KPYGYAIWEKMQRQLDDMFKETGHVNAY 68

Query: 296 TPQVLDQHLW-QQSGHWDSYRANMFAVKCA-------------DDTIKDLRTFALKPMNC 341
            P ++ +    +++ H + +      V                D   K      ++P + 
Sbjct: 69  FPLLIPKSFLSREAEHVEGFAKECAVVTHYRLKNDPNGGGVVVDPAAKLEEELIIRPTSE 128

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
                 + + + SYR+LP+   ++ +V+R E        +R   F   + H   T     
Sbjct: 129 TIIWNTYKNWINSYRDLPILCNQWANVFRWEMR--TRLFLRTAEFLWQEGH---TAHATR 183

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E  +    ++++Y +F                                    +      
Sbjct: 184 EEAEEEAVRMLNVYGEF--------------------------------AEKYMAVPVVK 211

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHP 520
            + +      GA      E +++D  G+  Q GT   +  N    F+  +VN  ++  + 
Sbjct: 212 GVKSANERFAGALNTYTIEAMMQD--GKALQSGTSHFLGQNFAKAFDVQFVNKENKLEY- 268

Query: 521 VMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVEYAQE------ 570
             +    +G   R +G +I    ++    LP  L+PIQ ++  I  +A   A+       
Sbjct: 269 --VWATSWGVSTRLMGALIMTHSDDNGLVLPPHLAPIQVVIVPIYKNAEMLAKIDEKVAG 326

Query: 571 IANLLKSHHLSIETDF-RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           I   LKS  +S++ D   N+   +K  ++ +K +P+ ++ G ++    ++ + R  +   
Sbjct: 327 IVAKLKSMGISVKYDNADNKRPGFKFADYEVKGVPVRLVMGGRDLENNTMEVMRRDTLEK 386

Query: 630 QKVS---LLDAIPILTKE 644
           +  S   + + +  L +E
Sbjct: 387 ETRSCDGIEEYVKDLLEE 404


>gi|193213223|ref|YP_001999176.1| prolyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327]
 gi|259511581|sp|B3QPX3|SYP_CHLP8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|193086700|gb|ACF11976.1| prolyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327]
          Length = 481

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 68/422 (16%), Positives = 151/422 (35%), Gaps = 58/422 (13%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
            ++   + +  L R   L   ++    ++     G+ I++ + + +    K+  +     
Sbjct: 8   RQQDYSQWYIDLVRSAKLADYSDVRGCMVI-RPNGYAIWEKMQAALDGMFKETGHVNAYF 66

Query: 297 PQVLDQHL-WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P  + +    +++ H + +      V              ++P +     + +   ++SY
Sbjct: 67  PMFIPESFIAKEAEHIEGFAPECAVVTHGGGEEL-AEKLYVRPTSETIIWSSYKKWIQSY 125

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISI 414
           R+LP+ + ++ +V R E        +R   F   + H      E+   E +++ N+  + 
Sbjct: 126 RDLPLLINQWANVVRWEMR--TRLFLRTTEFLWQEGHTAHADPEEAQEEVIRMINVYRTF 183

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            +++    ++V   +  EK  G+DA +                                 
Sbjct: 184 AEEYMAMPVIVGKKSESEKFAGADATY--------------------------------- 210

Query: 475 YGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
                E +++D  G+  Q GT   +  N    F+  +        +   +    +G   R
Sbjct: 211 ---CIEAMMQD--GKALQAGTSHNLGQNFAKAFDCQFQTKEGVLDY---VWATSWGVSTR 262

Query: 534 FIGIMIENFKGNLPLWLSP----IQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETD 585
            IG +I     +  L L P     Q ++  I          +A+ IA  L  H +S   D
Sbjct: 263 LIGALIMAHSDDKGLVLPPKLASRQVVIIPILKGDKEEVRAHARFIAKALNKHGISTFVD 322

Query: 586 FR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
              N +  +K  E+ ++ IP+ I  G ++ +E    + R  +    +V L   +    +E
Sbjct: 323 DSENNSPGWKFAEYELQGIPVRIELGPRDIAEGKCIVARRDTFEKTEVLLDAEMTENIEE 382

Query: 645 SL 646
            L
Sbjct: 383 IL 384


>gi|332827078|gb|EGJ99863.1| prolyl-tRNA synthetase [Dysgonomonas gadei ATCC BAA-286]
          Length = 493

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 69/438 (15%), Positives = 156/438 (35%), Gaps = 75/438 (17%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
             +   + +  L  + DL   +     ++     G+ I++ +   +    K+  +     
Sbjct: 11  RSKDYSQWYLDLVMKADLAENSAVRGCMVI-KPYGYAIWEKMQRQLDDMFKETGHVNAYF 69

Query: 297 PQVLDQHLW-QQSGHWDSYRANMFAVKCA-------------DDTIKDLRTFALKPMNCP 342
           P  + +    +++ H + +      V                D   K      ++P +  
Sbjct: 70  PLFIPKSFLSKEADHVEGFAKECAVVTHYRLKNDPDGKGVIVDPEAKLEEELIVRPTSET 129

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMF 401
                + + ++SYR+LP+ + ++ +V R E        +R   F   + H    T+E+  
Sbjct: 130 IIWNTYRNWIQSYRDLPILVNQWANVVRWEMR--TRLFLRTAEFLWQEGHTAHATREEAE 187

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E +++ N+     +++    ++  + +  E+  G                         
Sbjct: 188 AETIQMLNVYAQFAEEYMAMPVIKGVKSASERFAG------------------------- 222

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHP 520
                      A      E +++D  G+  Q GT   +  N    F+  + +   +  H 
Sbjct: 223 -----------AVDTYTIEAMMQD--GKALQSGTSHFLGQNFAKAFDVRFADKEGKMEH- 268

Query: 521 VMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVEYA------QE 570
             +    +G   R IG +I    ++    LP  L+P Q ++  I     + A        
Sbjct: 269 --VWATSWGVSTRLIGALIMAHSDDNGLVLPPKLAPFQVVIVPIYKGDEQLALINEKVDG 326

Query: 571 IANLLKSHHLSIETDF-RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           +   LK+  +S++ D   N+   +K  E+ +K +P+ +  G ++    ++ + R  + T 
Sbjct: 327 LVKSLKALGISVKYDNADNKKPGWKFSEYELKGVPVRLAMGARDMENNTVEVARRDTLTK 386

Query: 630 QKVS---LLDAIPILTKE 644
           + VS   L   I  L  E
Sbjct: 387 ETVSCDGLDIYIKNLLDE 404


>gi|329954822|ref|ZP_08295839.1| proline--tRNA ligase [Bacteroides clarus YIT 12056]
 gi|328526926|gb|EGF53937.1| proline--tRNA ligase [Bacteroides clarus YIT 12056]
          Length = 497

 Score =  158 bits (400), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 68/438 (15%), Positives = 158/438 (36%), Gaps = 73/438 (16%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
              E+  + + +L  + DL   +     ++     G+ I++ +   +    K+  +    
Sbjct: 10  KRSENYSQWYNELVVKADLAEQSAVRGCMVI-KPYGYAIWEKMQRQLDDMFKETGHVNAY 68

Query: 296 TPQVLDQHLW-QQSGHWDSYRANMFAVKCA-------------DDTIKDLRTFALKPMNC 341
            P ++ +    +++ H + +      V                D   K      ++P + 
Sbjct: 69  FPLLIPKSFLSREAEHVEGFAKECAVVTHYRLKNDPNGGGVVVDPAAKLEEELIIRPTSE 128

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
                 + + + SYR+LP+   ++ +V+R E        +R   F   + H   T     
Sbjct: 129 TIIWNTYKNWINSYRDLPILCNQWANVFRWEMR--TRLFLRTAEFLWQEGH---TAHATR 183

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E  +    ++++Y +F                                    +      
Sbjct: 184 EEAEEEAVRMLNVYGEF--------------------------------AEKYMAVPVVK 211

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHP 520
            + +      GA      E +++D  G+  Q GT   +  N    F+  +VN  ++  + 
Sbjct: 212 GVKSANERFAGALNTYTIEAMMQD--GKALQSGTSHFLGQNFAKAFDVQFVNKENKLEY- 268

Query: 521 VMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVEYAQE------ 570
             +    +G   R +G +I    ++    LP  L+PIQ ++  I  +A   A+       
Sbjct: 269 --VWATSWGVSTRLMGALIMTHSDDNGLVLPPHLAPIQVVIVPIYKNAEMLAKIDEKIAG 326

Query: 571 IANLLKSHHLSIETDF-RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           I   LKS  +S++ D   N+   +K  ++ +K +P+ ++ G ++    ++ + R  +   
Sbjct: 327 IVAKLKSMGISVKYDNADNKRPGFKFADYEVKGVPVRLVMGGRDLENNTMEVMRRDTLEK 386

Query: 630 QKVS---LLDAIPILTKE 644
           +  S   + + +  L +E
Sbjct: 387 ETRSCDGIEEYVKDLLEE 404


>gi|189217492|ref|NP_001121216.1| hypothetical protein LOC100158287 [Xenopus laevis]
 gi|169642429|gb|AAI60714.1| LOC100158287 protein [Xenopus laevis]
          Length = 655

 Score =  158 bits (400), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 71/436 (16%), Positives = 144/436 (33%), Gaps = 60/436 (13%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
            +Q         EE+    + ++  + ++     D SG        + I++ +  +  ++
Sbjct: 152 KKQTRLGLEAKKEENLPDWYSQVITKSEMIEY-YDVSGCYVLRPWAFAIWEAIKEFFDKE 210

Query: 287 IKD-DYEEINTPQVLD-QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           IK    E    P  +    L ++  H   +   +  V  +  T       A++P +    
Sbjct: 211 IKKLGVENCYFPMFVSQAALEKEKTHIADFAPEVAWVTRSGKTEL-AEPIAVRPTSETVM 269

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNE 403
              +   ++S+R+LP++L ++ +V R E        +R R F   + H  F T E+   E
Sbjct: 270 YPAYAKWVQSHRDLPIKLNQWCNVVRWEFKHP-QPFLRTREFLWQEGHTAFATYEEAAEE 328

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            L+I +L   +Y+D     ++    T  EK  G D                         
Sbjct: 329 VLQILDLYARVYEDLLAIPVVKGRKTEKEKFAGGD------------------------- 363

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
                      Y    E     A  R  Q  T        S+                  
Sbjct: 364 -----------YTTTVE-AFISASSRAIQGATSHHLGQNFSKIFEIVFEDPKTPGLKQYA 411

Query: 524 HRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTT----------ITSSAVEYAQ 569
           ++  +G   R IG M+     N+ + L P    +Q ++               + ++   
Sbjct: 412 YQNSWGLSTRTIGAMVMVHADNIGMVLPPRVACVQVVIIPCGITNTLSEEDKDALLKKCD 471

Query: 570 EIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERS-IGIRRFGST 627
           +    L +  +    D R+  +  +K     +K +PI +  G ++   +  + +R   + 
Sbjct: 472 QYLKRLLNADVRARADLRDNYSPGWKFNHWELKGVPIRLEVGPRDMKNKQFVAVR-RDNG 530

Query: 628 TTQKVSLLDAIPILTK 643
             Q +    A   L +
Sbjct: 531 EKQTIPEGQAETRLKE 546


>gi|104783084|ref|YP_609582.1| prolyl-tRNA synthetase [Pseudomonas entomophila L48]
 gi|123380820|sp|Q1I6D7|SYP_PSEE4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|95112071|emb|CAK16798.1| prolyl-tRNA synthetase [Pseudomonas entomophila L48]
          Length = 571

 Score =  158 bits (400), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 50/248 (20%), Positives = 97/248 (39%), Gaps = 11/248 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L        ++    H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLATQKETPADAVVISHQLMLRAGMIRKLA---SGLYTWLPMGLRVMRKVEAVVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P +    LWQ+SG W+ Y   +  +K   D     R F + P +    
Sbjct: 60  EMNAAGALEVLMPSIQPAELWQESGRWEQYGPELLRLKDRHD-----RDFCVGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+ + +  + +R+E      GLMR R F   DA+ F   +    E 
Sbjct: 115 TDLARNELSSYKQLPLNMYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSFHADQASLQET 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             ++H    +I+   G +   V+  T       S      A +    V+ +  +     I
Sbjct: 174 YDRMHQAYSNIFTRLGLDFRPVQADTGSIGGSYSHEFHVLASSGEDDVIFSDSSDYAANI 233

Query: 464 NTGVLLGE 471
                +  
Sbjct: 234 EKAEAIPR 241



 Score = 82.9 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 65/177 (36%), Gaps = 14/177 (7%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
           P  +      I R  + G I Q+            +  + +   PV++    +G  + R 
Sbjct: 393 PSPDGQGTLVIKRGIEVGHIFQLGTKYSEALKCQVLGENGK---PVVLSMGCYGIGVSRV 449

Query: 535 IGIMIE-NFKGNLPLW---LSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFR 587
           +   IE ++     +W   L+P Q  +  +   T    E   ++   L +    +  D R
Sbjct: 450 VAAAIEQSYDDKGIIWNDALAPFQIALVPLRYETDVVREATDKLYAELTAAGFEVLLDDR 509

Query: 588 NET--INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           ++      K  +  +  IP  I+  D+  ++ ++  +    +  Q + L + +  L 
Sbjct: 510 DKKTSPGIKFADMELIGIPHRIVVSDRGLADGNLEYKHRTESEAQALPLNEVLTFLQ 566


>gi|332141950|ref|YP_004427688.1| prolyl-tRNA synthetase [Alteromonas macleodii str. 'Deep ecotype']
 gi|327551972|gb|AEA98690.1| prolyl-tRNA synthetase [Alteromonas macleodii str. 'Deep ecotype']
          Length = 572

 Score =  158 bits (399), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 61/293 (20%), Positives = 114/293 (38%), Gaps = 11/293 (3%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L        ++E   H+ + R   +  +A   SG+  W   G ++   + + +R 
Sbjct: 3   TSQYLLATQKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPSGLRVLNKVANIVRE 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LW++SG W+ Y   +  VK      +  R F L P +    
Sbjct: 60  EMNKAGAIEVLMPVVQPADLWEESGRWEEYGPELLRVKD-----RHQRDFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
            A+  + + SY++LP+ L +  + +R+E      G+MR R FT  DA+ F  ++    E 
Sbjct: 115 TALVRNEISSYKQLPLNLYQVQTKFRDEVRPRF-GIMRGREFTMKDAYSFHLEDSCLEET 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             K++    +I+   G +   V   +       S      AE+    +  +  +     +
Sbjct: 174 YQKMYGAYCAIFSRMGLDFRAVIADSGSIGGNHSHEFHVLAESGEDAIAFSSDSDYAANV 233

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE 516
                +          +   KDA G+D+      VD N  +      V   +E
Sbjct: 234 EMAAAVAPEKAAPSGADVETKDAKGKDFNAILKSVDANATNAVKVVLVKGANE 286



 Score = 70.2 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 24/167 (14%), Positives = 55/167 (32%), Gaps = 14/167 (8%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           I R  + G I Q+        N   ++   +     M    +   + R +   IE     
Sbjct: 408 IKRGIEVGHIFQLGRKYSEAMNCGVLSETGKHQTLTMGCYGI--GVSRIVAAAIEQNHDK 465

Query: 546 LPL-WL---SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
             + W    +P +  +  +    +    E  + +   L +  + +  D R E       +
Sbjct: 466 FGIKWPDPIAPFKIALIPMNMHKSHRIKEAVEALYEELVALGIEVLFDDRKERPGVMFND 525

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL---DAIPIL 641
             +  IP  I+ G++    + +  +   +   Q + L    + +  L
Sbjct: 526 MELIGIPHSIVIGERNLDNQQVEYKNRRTGEKQLLDLSAAKEFVAAL 572


>gi|330828282|ref|YP_004391234.1| Prolyl-tRNA synthetase, family II [Aeromonas veronii B565]
 gi|328803418|gb|AEB48617.1| Prolyl-tRNA synthetase, family II [Aeromonas veronii B565]
          Length = 574

 Score =  158 bits (399), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 57/249 (22%), Positives = 102/249 (40%), Gaps = 13/249 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTLKETPSDAEVVSHQLMLRAGMIRKLA---SGMYAWLPTGLRVLKKIENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E++ P V    LWQ+SG WD Y   +  +     T +  R F L P +    
Sbjct: 60  EMNNAGAVEVSMPVVQPAELWQESGRWDDYGPELCRL-----TDRHNRPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
            A+  + + SY++LP+ L +  + +R+E      G+MR R F   DA+ F    E + + 
Sbjct: 115 TALVRYEVNSYKQLPLNLYQIQTKFRDEVRPRF-GVMRGREFLMKDAYSFHIDKESLVDT 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             K+H      +   G     V+  T      GS      AE+     L    +SS    
Sbjct: 174 YEKMHAAYCKAFTRMGLNFRPVQADTGSIGGTGSHEFQVLAESG--EDLIAFSDSSDYAA 231

Query: 464 NTGVLLGEG 472
           N  +     
Sbjct: 232 NIEMAEALA 240



 Score = 90.2 bits (222), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 31/166 (18%), Positives = 61/166 (36%), Gaps = 13/166 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           + R  + G I Q+         A  +N   +    V +    +G  + R +   IE    
Sbjct: 407 LKRGIEVGHIFQLGTKYSEAMKASVLNEAGKS---VTMEMGCYGIGVSRLVAAAIEQNND 463

Query: 545 N----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                 P  ++P +  +  +    +    E AQ+    LK+  + +  D R E       
Sbjct: 464 QYGIIWPDAIAPFEVAIVPMNMHKSERVAEQAQQFYAELKAAGVDVLFDDRKERPGVMFA 523

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +  +  IP  I+ GD+      +  +   +   Q+V++ D I +L 
Sbjct: 524 DMELLGIPHAIVIGDRGLDNGVVEYKCRRTGEKQEVAISDIIAMLK 569


>gi|220673116|emb|CAX14534.1| novel protein similar to vertebrate threonyl-tRNA synthetase (Tars)
           [Danio rerio]
          Length = 145

 Score =  158 bits (399), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 39/127 (30%), Positives = 68/127 (53%), Gaps = 1/127 (0%)

Query: 516 EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLL 575
           ++  PV+IHRA+ GS+ER I I+ EN+ G  PLWLSP Q ++  +  S  EYA+++    
Sbjct: 4   DRDRPVIIHRAILGSVERMIAILTENYAGKWPLWLSPRQVMLVPVNPSLEEYAKQVCKRF 63

Query: 576 KSHHLSIETD-FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
                  + D   +  +N KIR   + +   I++ G+KE    S+ +R   +    ++ +
Sbjct: 64  VEAGFMADADLDSSCLLNKKIRNAQLAQYNFILVVGEKERLSNSVNVRTRDNKVHGELPV 123

Query: 635 LDAIPIL 641
           L+ +  L
Sbjct: 124 LEVMERL 130


>gi|254584943|ref|XP_002498039.1| ZYRO0G00704p [Zygosaccharomyces rouxii]
 gi|238940933|emb|CAR29106.1| ZYRO0G00704p [Zygosaccharomyces rouxii]
          Length = 681

 Score =  158 bits (399), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 82/407 (20%), Positives = 145/407 (35%), Gaps = 61/407 (14%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRAN 317
            D SG        + I++++  +   +IK    +    P  +   + + +  H + +   
Sbjct: 205 YDVSGCYILRPPSYSIWESIQRWFDDRIKAMGVQNAYFPLFVSSRVLEKEKDHVEGFAPE 264

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           +  V  A  +  +    A++P +       +   ++SYR+LP++L ++ SV R E     
Sbjct: 265 VAWVTKAGSSDLE-EPVAIRPTSETVMYPYYAKWIRSYRDLPLKLNQWNSVVRWEFK-HP 322

Query: 378 HGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
              +R R F   + H    TK     E L+I +    +Y++     ++    T  EK  G
Sbjct: 323 QPFLRTREFLWQEGHTAHLTKADAEEEVLQILDHYAGVYEELLAVPVVKGRKTEKEKFAG 382

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
                                     + T  + G    Y P          GR  Q  T 
Sbjct: 383 -------------------------GVFTTTVEG----YIP--------QTGRGIQGATS 405

Query: 497 -QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI-- 553
             +  N    FN    N        V + +  +G   R IG+M      N  L + P   
Sbjct: 406 HHLGQNFSKMFNVSVENPLGPDHPKVNVFQNSWGLSTRVIGVMTMIHSDNKGLVIPPRVS 465

Query: 554 --QAIVTTI------TSSAVEY----AQEIANLLKSHHLSIETDF-RNETINYKIREHSI 600
             QA+V  +      T     +    A+EI + LK   +    D+  N T  +K  ++ +
Sbjct: 466 QYQAVVLPVGITKKTTEEQRAHIHSSAREIESRLKKAGVRAFGDYNDNYTPGWKFAQYEL 525

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA---IPILTKE 644
           K IP+ +  G K+     + + R        V L +    IP L +E
Sbjct: 526 KGIPLRLESGPKDIESNQVTVVRRNDFRKVTVKLDELETRIPELLEE 572


>gi|329963564|ref|ZP_08301043.1| proline--tRNA ligase [Bacteroides fluxus YIT 12057]
 gi|328528553|gb|EGF55524.1| proline--tRNA ligase [Bacteroides fluxus YIT 12057]
          Length = 497

 Score =  158 bits (399), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 69/438 (15%), Positives = 158/438 (36%), Gaps = 73/438 (16%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
              E+  + + +L  + DL   +     ++     G+ I++ +   +    K+  +    
Sbjct: 10  KRSENYSQWYNELVVKADLAEQSAVRGCMVI-KPYGYAIWEKMQRQLDDMFKETGHVNAY 68

Query: 296 TPQVLDQHLW-QQSGHWDSYRANMFAVKCA-------------DDTIKDLRTFALKPMNC 341
            P ++ +    +++ H + +      V                D   K      ++P + 
Sbjct: 69  FPLLIPKSFLSREAEHVEGFAKECAVVTHYRLKNDPNGGGVVVDPAAKLEEELIIRPTSE 128

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
                 + + + SYR+LP+   ++ +V+R E        +R   F   + H   T     
Sbjct: 129 TIIWNTYKNWINSYRDLPILCNQWANVFRWEMR--TRLFLRTAEFLWQEGH---TAHATR 183

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E  +    ++++Y +F                                    +      
Sbjct: 184 EEAEEEAVRMLNVYGEF--------------------------------AEKYMAVPVVK 211

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHP 520
            + +      GA      E +++D  G+  Q GT   +  N    F+  +VN  ++  + 
Sbjct: 212 GVKSANERFAGALNTYTIEAMMQD--GKALQSGTSHFLGQNFAKAFDVQFVNKENKLEY- 268

Query: 521 VMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVEYAQE------ 570
             +    +G   R +G +I    ++    LP  L+PIQ ++  I  +A   A+       
Sbjct: 269 --VWATSWGVSTRLMGALIMTHSDDNGLVLPPHLAPIQVVIVPIYKNAEMLAKIDEKVAG 326

Query: 571 IANLLKSHHLSIETDF-RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           I   LKS  +S++ D   N+   +K  ++ +K +P+ ++ G ++    ++ I R  +   
Sbjct: 327 IVAKLKSMGISVKYDNADNKRPGFKFADYEVKGVPVRLVMGGRDLENNTMEIMRRDTLEK 386

Query: 630 QKVS---LLDAIPILTKE 644
           +  S   + + +  L +E
Sbjct: 387 ETRSCEGIEEYVKDLLEE 404


>gi|77457424|ref|YP_346929.1| prolyl-tRNA synthetase [Pseudomonas fluorescens Pf0-1]
 gi|114152233|sp|Q3KH16|SYP_PSEPF RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|77381427|gb|ABA72940.1| proline tRNA synthetase [Pseudomonas fluorescens Pf0-1]
          Length = 571

 Score =  158 bits (399), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 67/332 (20%), Positives = 121/332 (36%), Gaps = 23/332 (6%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L        ++    H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQFLLATQKETPSDAVVISHQLMLRAGMIRKLA---SGLYTWLPMGLRVMRKVEAIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P      LWQ+SG W+ Y   +  +K      +  R F   P +    
Sbjct: 60  EMDAAGSLEVLMPSTQPAELWQESGRWEEYGPELLRIKD-----RHGRDFCAGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+ L +  + +R+E      GLMR R F   D++ F   +      
Sbjct: 115 TDLMRNELSSYKQLPINLYQIQTKFRDEIRPRF-GLMRGREFIMKDSYSFHADQASLQVT 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             ++H+   +I+   G +   V+         GS      AE+    ++ +  +     I
Sbjct: 174 YDRMHDAYCNIFTRLGLKFRPVEADNGSIGGAGSHEFHVLAESGEDDIVFSNGSDYAANI 233

Query: 464 NTGVL-LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLP--SRFNAFYVNSHSEKCHP 520
                   E +   P  E  L D          +   FNLP         V++  E    
Sbjct: 234 EKAEAVPRETSRAAPSEELRLVDT-PDTKTIAALVEKFNLPIEKTIKTLIVHAEEEGK-- 290

Query: 521 VMIHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
            +I   + G  E     + E    N P   SP
Sbjct: 291 -LIALIIRGDHE-----LNEIKAANQPGVASP 316



 Score = 81.4 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 61/166 (36%), Gaps = 12/166 (7%)

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKG 544
           I R  + G I    N  S+     V    E   PV +    +G  + R +   IE N   
Sbjct: 403 IKRGIEVGHIFQLGNKYSKAMKCEVL--GENGKPVTLEMGCYGIGVSRVVAAAIEQNNDE 460

Query: 545 NLPLW---LSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNET--INYKIR 596
           N  +W   L+P Q  +  +   T    E   ++   L +    +  D R++      K  
Sbjct: 461 NGIIWSDALAPFQIALVPLRYETELVREATDKLYAELTAAGFEVLLDDRDKKTSPGIKFA 520

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +  +  IP  I+  D+  +E ++  +       Q + + D +  L 
Sbjct: 521 DMELIGIPHRIVVSDRGLAEGNLEYKSRTEGQAQALPVADVLSFLQ 566


>gi|320160470|ref|YP_004173694.1| prolyl-tRNA synthetase [Anaerolinea thermophila UNI-1]
 gi|319994323|dbj|BAJ63094.1| prolyl-tRNA synthetase [Anaerolinea thermophila UNI-1]
          Length = 478

 Score =  158 bits (399), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 64/411 (15%), Positives = 146/411 (35%), Gaps = 61/411 (14%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
              + L    E+    + ++    DL   A     ++     GW +++ +   + ++ K 
Sbjct: 1   MSDEKLTPQSENFSEWYNQIVLRADLADYAPVRGCMVV-KPYGWALWENIQQALDKRFKA 59

Query: 290 -DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
             +     P  +     + +  H + +   +  V        +     ++P +      +
Sbjct: 60  TGHVNAAFPLFIPMSFLEKEKEHVEGFSPELAVVTVGGGETLE-EPLVVRPTSETIIGYM 118

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLK 406
           ++  ++SYR+LP+ + ++G+V R E        +R   F   + H    T+E+   E ++
Sbjct: 119 YSKWIRSYRDLPILINQWGNVVRWEMR--TRLFLRTLEFYWQEGHTAHATREEAIEETMR 176

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           + +       +     ++    ++ EK  G       AE  M                  
Sbjct: 177 MLDTYYRFAIEEAAVPVIPGRKSQTEKFAG-------AEMSM------------------ 211

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
                        E +++D   +  Q GT   +  N    F+  +++ ++E  +      
Sbjct: 212 -----------TIEAMMRDT--KALQSGTSHFLGQNFARAFDIRFLDQNNELQYA---WT 255

Query: 526 AVFGSIERFIGIMIENFKGNL----PLWLSPIQAIVTTITSSAVEY------AQEIANLL 575
             +G   RFIG +I     +     P  L+PIQ ++  I     E          +   L
Sbjct: 256 TSWGLSTRFIGAIIMTHGDDQGLILPPRLAPIQVVIVPIYRDDAERSLVMPVVDRLEQEL 315

Query: 576 KSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
           +     +  D R+  T  +K  +  ++ +P+ +  G K+  + S+ + R  
Sbjct: 316 REA-FRVHVDRRDGVTPGFKFNDWEMRGVPLRLEVGPKDVEKNSVALARRD 365


>gi|281201813|gb|EFA76021.1| prolyl-tRNA synthetase [Polysphondylium pallidum PN500]
          Length = 552

 Score =  158 bits (399), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 72/394 (18%), Positives = 142/394 (36%), Gaps = 57/394 (14%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRAN 317
            D SG        + I++ + S+   +IK    +    P ++ +     +  H + +   
Sbjct: 77  YDISGCYILRPWSYSIWEQIQSFFDGEIKKLGVQNAYFPLLVSEKALNTEEDHIEGFAPE 136

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           +  V  +  +       A++P +       + + ++S+R+LP++L ++ +V R E    +
Sbjct: 137 VAWVTKSGKSNL-SEPIAIRPTSETIMYPAYKNWIRSHRDLPLKLNQWVNVVRWEFKRPV 195

Query: 378 HGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
              +R R F   + H  F TKE+   E L+I  L   +Y++                   
Sbjct: 196 -PFLRSREFLWQEGHTAFATKEEADKEVLQILRLYKRVYEEL------------------ 236

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
                             +     + + +      G  Y    E  +    GR  Q  T 
Sbjct: 237 ------------------LAVPVVEGLKSEKEKFAGGLYTSTIEGFIPT-NGRAIQAATS 277

Query: 497 Q-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLS 551
             +  N    F   + + ++ K    +  +  +G   R IG+MI    ++    LP  ++
Sbjct: 278 HCLGQNFSKMFGIEFEDENNAK---ALAWQNSWGLTTRTIGVMIMVHGDDKGLVLPPRIA 334

Query: 552 PIQAIVTTITSSAVE------YAQEIANLLKSHHLSIETDFR-NETINYKIREHSIKKIP 604
           PIQ +V  +     +       A E+   LK   +    D R N     K     +K +P
Sbjct: 335 PIQVVVVPLYFKDFDSAILDKKADEVVQRLKEAGIRAHLDNRTNYNPRQKYIHWELKGVP 394

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           I +  G K+  +  +   R  +   + V+  D I
Sbjct: 395 IRVEVGPKDLEKDVVMFCRRDNGVKESVANADLI 428


>gi|85057755|ref|YP_456671.1| prolyl-tRNA synthetase [Aster yellows witches'-broom phytoplasma
           AYWB]
 gi|114152170|sp|Q2NJ01|SYP_AYWBP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|84789860|gb|ABC65592.1| prolyl-tRNA synthetase [Aster yellows witches'-broom phytoplasma
           AYWB]
          Length = 474

 Score =  158 bits (399), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 65/413 (15%), Positives = 153/413 (37%), Gaps = 58/413 (14%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           + +  +  + +L   + +  G I +   G+ +++ +  ++   ++   ++ +  P V  +
Sbjct: 19  KWYTDICLKAELIAYS-EAKGFIIYLPYGYALWENIQKHLNCTLQKTGHQNVYFPLVFPE 77

Query: 303 HLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
            L+ ++  H   +      +              ++P +       ++  + SYR+LP  
Sbjct: 78  KLFHKEKEHIQGFSPEAAMITTTGKKNL-SEKLVIRPTSEILFSQYYSKTITSYRDLPKL 136

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
             ++ +V R E   +    +R + F   + H     EQ   E ++    I+ IY+  G  
Sbjct: 137 YNQWCNVVRWEK--TTKPFLRGKEFLWQEGHTVHATEQ---EAMQQTLSILDIYQKLGK- 190

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
                                          D +         T      GA      E 
Sbjct: 191 -------------------------------DLLALPFVCGKKTETEKFAGALITYSIEA 219

Query: 482 ILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI- 539
           ++ D  G+  Q GT           F   + +  ++K +    H+  +G   R IG +I 
Sbjct: 220 LMHD--GQALQAGTSHYLGIIFAKSFQIQFQDCDNQKKYA---HQTSWGVSTRLIGALIM 274

Query: 540 ---ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKS---HHLSIETDFRNETINY 593
              ++    LP +++P+Q ++  +  +  E  ++++  L S    +  +  D +++T  +
Sbjct: 275 VHSDDEGLVLPPYVAPMQIVIIPL-QTQDESVKQVSENLFSILQKNYRVHLDLQDKTAGW 333

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA---IPILTK 643
           K  ++ +K +P+ I  G +      + I +  +   Q + + D    IP L +
Sbjct: 334 KFSQYELKGVPLRIEIGKRGLENDEVTIFQRYNFAKQNIKIKDFPSQIPQLFE 386


>gi|224539754|ref|ZP_03680293.1| hypothetical protein BACCELL_04663 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224518632|gb|EEF87737.1| hypothetical protein BACCELL_04663 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 131

 Score =  158 bits (399), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 53/130 (40%), Positives = 79/130 (60%), Gaps = 2/130 (1%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+TFPDGS++ +    TG  +AESIS  LA++ +A  +NG++ DL  P+  +    + 
Sbjct: 1   MIKITFPDGSVREYNEGVTGLQIAESISSRLAQEVLACGVNGEIYDLGRPINEDAEFVLY 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQ 121
             ED +      H+ AH++AEA+Q ++P +Q  IGP IE+GFYYD D  E      +L  
Sbjct: 61  KWEDEQGKHAFWHTSAHLLAEALQELYPGIQFGIGPAIENGFYYDVDPGEAVIKESDLPA 120

Query: 122 IEKKMQEIIA 131
           IE KM E++A
Sbjct: 121 IEAKMAELVA 130


>gi|319952066|ref|YP_004163333.1| prolyl-tRNA synthetase [Cellulophaga algicola DSM 14237]
 gi|319420726|gb|ADV47835.1| prolyl-tRNA synthetase [Cellulophaga algicola DSM 14237]
          Length = 491

 Score =  158 bits (399), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 67/449 (14%), Positives = 155/449 (34%), Gaps = 72/449 (16%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD 290
           +++ L    E   + + +L  + DL   +     ++     G+ I++ + + +    K+ 
Sbjct: 1   MSKNLTKRSEDYSKWYNELVVKADLAENSGVRGCMVI-KPYGYAIWEKMQAALDAMFKET 59

Query: 291 YEEI--NTPQVLDQHLWQQSGHWDSYRANMFAVKCA-------------DDTIKDLRTFA 335
             E       +   +L +++ H + +      V                D   K      
Sbjct: 60  GHENAYFPLFIPKSYLSKEASHVEGFAKECAVVTHYRLKMAEDGSGIIVDPDAKLEEELI 119

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC 395
           ++P +       +   ++SYR+LP+ + ++ +V R E        +R   F   + H   
Sbjct: 120 VRPTSETIIWDTYRRWIQSYRDLPILINQWANVVRWEMR--TRLFLRTSEFLWQEGHTAH 177

Query: 396 TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTI 455
             E+      +    I + +                                     + +
Sbjct: 178 ATEKEAVAEAEQMMNIYAEF-----------------------------------AENHM 202

Query: 456 KNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSH 514
                  + T      GA      E +++D  G+  Q GT   +  N    F+  + +  
Sbjct: 203 AVPVIKGLKTETERFAGAIETYCIEALMQD--GKALQAGTSHFLGQNFAKAFDVKFTSKE 260

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTIT------SSA 564
            ++    ++    +G   R +G ++    ++    LP  L+PIQ ++  I        + 
Sbjct: 261 GKQE---LVWATSWGVSTRLMGALVMTHSDDKGLVLPPKLAPIQVVIVPIYKGDEQLDAI 317

Query: 565 VEYAQEIANLLKSHHLSIETDFRN-ETINYKIREHSIKKIPIIIICGDKEASERSIGIRR 623
            E    +   L++  +S++ D R+     +K  E+ +K +PI +  G ++    +  + R
Sbjct: 318 SERIAPLLKELRAKGVSVKYDNRDTYKPGFKFAEYELKGVPIRLAIGQRDMDNGTFEVAR 377

Query: 624 FGSTTTQKVSLLDAIPILTKESLPPDCQK 652
             +   + V   + +  +  E L  D QK
Sbjct: 378 RDTLEKETVQADEIVAKI--EFLLEDIQK 404


>gi|308068694|ref|YP_003870299.1| Prolyl-tRNA synthetase (Proline--tRNA ligase) [Paenibacillus
           polymyxa E681]
 gi|305857973|gb|ADM69761.1| Prolyl-tRNA synthetase (Proline--tRNA ligase) [Paenibacillus
           polymyxa E681]
          Length = 482

 Score =  158 bits (399), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 71/431 (16%), Positives = 163/431 (37%), Gaps = 59/431 (13%)

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR 284
            +  ++  + +    E   R +  + ++ +L   +    G I +   G++I++ +   M 
Sbjct: 1   MSNDKQFVEEITPQSEDFSRWYIDVIKKAELMDYSPVR-GCIVFRPDGFEIWEHIKEAMD 59

Query: 285 RKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
            + ++  +     P  + +  + ++  H + +   +  V  A     + R  A++P +  
Sbjct: 60  VRFRETGHRNAYFPMFIPESFFQKEKEHVEGFNPELPWVTEAGGEKLEER-LAIRPTSET 118

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMF 401
               +++  ++SYR+LPV + ++ +V R E        +R   F   + H    T+E+  
Sbjct: 119 MIGHMYSKWIQSYRDLPVLINQWANVVRWEKR--TLPFLRTSEFLWQEGHTAHETEEEAR 176

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E +K+  +   + ++     ++    T  EK  G                         
Sbjct: 177 EETMKMLEVYREVIEEVLAIPVITGQKTPSEKFAG------------------------- 211

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHP 520
                      A      E ++KD  GR  Q GT      N    F+  Y++  +     
Sbjct: 212 -----------AKDTFSLEAMMKD--GRAVQAGTSHYMGTNFAVAFDIKYLSRENNLE-- 256

Query: 521 VMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTIT-----SSAVEYAQEI 571
              H   +G+  R IG +I    ++    LP  ++P Q I+  I       + +  A E+
Sbjct: 257 -FAHTTSWGTSTRLIGALIMVHGDDRGLALPPKVAPTQVIMVPIGPPKKRDAVIARADEL 315

Query: 572 ANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
              LK   + ++ D R++ +  +K  E+ ++ +P+ +  G ++       +    S   +
Sbjct: 316 FAELKQAGVRVKMDDRSDVSPGWKFNEYEMRGVPVRMEIGPRDMENGVCVLVSRISGEKK 375

Query: 631 KVSLLDAIPIL 641
            V   + +  +
Sbjct: 376 IVQQDNLVEEV 386


>gi|188994851|ref|YP_001929103.1| prolyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277]
 gi|259511612|sp|B2RJG1|SYP_PORG3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|188594531|dbj|BAG33506.1| prolyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277]
          Length = 493

 Score =  158 bits (399), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 68/437 (15%), Positives = 152/437 (34%), Gaps = 73/437 (16%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
             ES  + ++ L  + DL   +     ++     G+ I++ +   +    K+  +     
Sbjct: 11  RSESYSQWYQDLVIKADLAENSAVRGCMVI-KPYGYAIWEKMQRQLDDMFKETGHVNAYF 69

Query: 297 PQVLDQHLW-QQSGHWDSYRANMFAVKCA-------------DDTIKDLRTFALKPMNCP 342
           P  + +    +++ H + +      V                D   K      ++P +  
Sbjct: 70  PLFIPKSFLSREAEHVEGFAKECAVVTHYRLKANPDGDGVVVDPQAKLEEELIVRPTSET 129

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN 402
                + + ++S+R+LP+   ++ +V R E        +R   F   + H   T      
Sbjct: 130 IIWNTYKNWIQSHRDLPILCNQWANVVRWEMR--TRLFLRTAEFLWQEGH---TAHATKE 184

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
           E  +    ++ +Y  F                                  + +       
Sbjct: 185 EAEEEARRMLEVYATF--------------------------------AEEYMAMPVVKG 212

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPV 521
           + +      GA      E +++D  G+  Q GT   +  N    FN  + +    +    
Sbjct: 213 VKSANERFAGAVDTYTIEALMQD--GKALQSGTSHFLGQNFAKAFNVTFADKDGNRD--- 267

Query: 522 MIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVEYAQ------EI 571
            +    +G   R +G +I    ++    LP  L+P Q ++  I  +  + AQ      +I
Sbjct: 268 FVWATSWGVSTRLMGALIMSHSDDNGLVLPPKLAPYQVVIVPIYRNEEQLAQIDEKATQI 327

Query: 572 ANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
              L++  +S++ D   N+   +K  E+ +K +P+ +  G ++    +I I R  + T +
Sbjct: 328 IQALRAKGISVKYDNSDNKKPGWKFAEYELKGVPVRLAMGARDLENNTIEIARRDTLTKE 387

Query: 631 KVSLL---DAIPILTKE 644
            V L    + +  L  +
Sbjct: 388 TVGLDGIEETVATLLDD 404


>gi|261880449|ref|ZP_06006876.1| threonine-tRNA ligase [Prevotella bergensis DSM 17361]
 gi|270332786|gb|EFA43572.1| threonine-tRNA ligase [Prevotella bergensis DSM 17361]
          Length = 136

 Score =  158 bits (399), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 50/136 (36%), Positives = 83/136 (61%), Gaps = 3/136 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK+TFPD S++ +    TG  +A+SIS +LA+  V+ AING+  +L+ P+  + SI + 
Sbjct: 1   MIKITFPDKSVREYEPGVTGFQIAQSISPALARDVVSCAINGETTELNRPINEDSSITLY 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYD--FDKEQPFSSDELA 120
             +D        H+ AH++AEA++ ++P +Q   GP IE+GF+YD    + Q  S ++  
Sbjct: 61  KFDDDEGKHTFWHTSAHLLAEALKELYPGIQFGFGPAIENGFFYDVMPAEGQTISENDFP 120

Query: 121 QIEKKMQEIIARDSPF 136
           +IE KM+E+  +D P 
Sbjct: 121 RIEAKMRELAKKDEPV 136


>gi|189465935|ref|ZP_03014720.1| hypothetical protein BACINT_02298 [Bacteroides intestinalis DSM
           17393]
 gi|189434199|gb|EDV03184.1| hypothetical protein BACINT_02298 [Bacteroides intestinalis DSM
           17393]
          Length = 497

 Score =  158 bits (399), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 67/438 (15%), Positives = 154/438 (35%), Gaps = 73/438 (16%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
              E+  + + +L  + DL   +     ++     G+ I++ +   +    K+  +    
Sbjct: 10  KRSENYSQWYNELVVKADLAEQSAVRGCMVI-KPYGYAIWEKMQRQLDDMFKETGHVNAY 68

Query: 296 TPQVLDQHLW-QQSGHWDSYRANMFAVKCA-------------DDTIKDLRTFALKPMNC 341
            P ++ +    +++ H + +      V                D   K      ++P + 
Sbjct: 69  FPLLIPKSFLSREAEHVEGFAKECAVVTHHRLKNAPDGSGVIVDPEAKLEEELIIRPTSE 128

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
                 + + + SYR+LP+   ++ +V R E        +R   F   + H   T     
Sbjct: 129 TIIWNTYKNWINSYRDLPILCNQWANVMRWEMR--TRLFLRTAEFLWQEGH---TAHATR 183

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E  +    ++++Y +F                                    +      
Sbjct: 184 EEAEEEAVRMLNVYAEF--------------------------------AEKYMAVPVVK 211

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHP 520
            + +      GA      E +++D  G+  Q GT   +  N    F+  +VN  ++  + 
Sbjct: 212 GVKSANERFAGALDTYTIEAMMQD--GKALQSGTSHFLGQNFAKAFDVQFVNKENKMEY- 268

Query: 521 VMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTIT------SSAVEYAQE 570
             +    +G   R +G +I    ++    LP  L+PIQ ++  I           E    
Sbjct: 269 --VWATSWGVSTRLMGALIMTHSDDNGLVLPPHLAPIQVVIVPIYKNAEMLQKIDEKVAG 326

Query: 571 IANLLKSHHLSIETDF-RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           I   LKS  +S++ D   N+   +K  ++ +K +P+ ++ G ++    ++ + R  +   
Sbjct: 327 IVAKLKSMGVSVKYDNADNKRPGFKFADYELKGVPVRLVMGGRDLENNTMEVMRRDTLEK 386

Query: 630 QKVS---LLDAIPILTKE 644
           +  S   + + +  L +E
Sbjct: 387 ETRSCDGIEEYVKDLLEE 404


>gi|197294712|ref|YP_001799253.1| prolyl-tRNA synthetase [Candidatus Phytoplasma australiense]
 gi|259511611|sp|B1VAN9|SYP_PHYAS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|171854039|emb|CAM12012.1| Prolyl-tRNA synthetase [Candidatus Phytoplasma australiense]
          Length = 474

 Score =  158 bits (398), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 64/391 (16%), Positives = 144/391 (36%), Gaps = 55/391 (14%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           + +  +  + +L   + D  G I +   G+ +++ +  Y+  + +   ++ +  P V  +
Sbjct: 19  QWYTDICLKAELIAYS-DVKGFIIYLPYGYALWENIQKYLNYEFQKTGHQNVYFPLVFSE 77

Query: 303 HLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
            L+ ++  H   +      +              ++P +       +   + SYR+LP  
Sbjct: 78  KLFQKEKDHIQGFSPEAAMITSTGQKEL-FEKLVIRPTSEVLFSQYYAKIISSYRDLPKL 136

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
             +F +V R E   +    +R + F   + H     E+   E L      I +Y+  G  
Sbjct: 137 YNQFCNVVRWEK--ATKPFLRGKEFLWQEGHTVHATEK---EALDQTLFAIQLYEKLGK- 190

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
                                          + +         T      GA      E 
Sbjct: 191 -------------------------------ELLALPFVCGRKTEKEKFAGALITYSIEA 219

Query: 482 ILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI- 539
           +++D  G+  Q GT      N    F   + +   +  +   +H+  +G   R IG +I 
Sbjct: 220 LMQD--GQALQAGTSHYLGTNFAQSFQIQFQDQDHQNKY---VHQTSWGVSTRLIGALIM 274

Query: 540 ---ENFKGNLPLWLSPIQAIVTTITSS---AVEYAQEIANLLKSHHLSIETDFRNETINY 593
              ++    LP +++PIQ ++  +          A++I + LK+    +  D +N+T  +
Sbjct: 275 VHSDDEGLILPPYIAPIQIVIIPLQPKNELVQAEAKKIFDDLKTT-YRVHLDLQNKTPGW 333

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRF 624
           K  ++ +K +P+ I  G ++ ++  + I + 
Sbjct: 334 KFSQYELKGVPLRIEIGARDLAQGEVTIFQR 364


>gi|325954344|ref|YP_004238004.1| prolyl-tRNA synthetase [Weeksella virosa DSM 16922]
 gi|323436962|gb|ADX67426.1| Prolyl-tRNA synthetase [Weeksella virosa DSM 16922]
          Length = 492

 Score =  158 bits (398), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 63/395 (15%), Positives = 149/395 (37%), Gaps = 72/395 (18%)

Query: 270 RKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCA--- 324
             G+ I++ + + + ++ K+  ++    P  + +  ++ +  + + +      V      
Sbjct: 38  PYGYAIWEKIQAELDKRFKETGHQNAYFPIFVPRSYFEAEEKNAEGFAKECAVVTHYRLK 97

Query: 325 -----------DDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP 373
                      D   K      ++P +     + + + ++SYR+LP+ + ++ +V R E 
Sbjct: 98  NDESTPGKLMVDPEAKLEEELIVRPTSEAIIWSTYKNWIQSYRDLPILINQWANVVRWEM 157

Query: 374 SGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
                  +R   F   + H    TKE+  +E  ++ ++   + ++     ++    T  E
Sbjct: 158 R--TRLFLRTTEFLWQEGHTAHATKEEAISESRQMLDVYTEVVENHMAIPVVRGCKTPSE 215

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
           +  G++  +                                      E +++D  G+  Q
Sbjct: 216 RFAGAEETY------------------------------------TIEAMMQD--GKALQ 237

Query: 493 CGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLP 547
            GT   +  N    F+  +  +  ++ +   +    +G   R +G +I    +++   LP
Sbjct: 238 AGTSHFLGQNFAKAFDVKFTTNEGKQDY---VWATSWGVSTRLMGALIMTHSDDYGLVLP 294

Query: 548 LWLSPIQAIVTTITSS------AVEYAQEIANLLKSHHLSIETDFRNET-INYKIREHSI 600
             ++PIQ ++  I  S        E A  I N L S  +S++ D   +T   +K  E+ +
Sbjct: 295 PKIAPIQVVIVPIFRSEEQLIQVSEVANRIKNELHSIGISVKFDDDEKTKPGWKFAEYEL 354

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
           K +P+ I  G K+     + I R  +     + + 
Sbjct: 355 KGVPVRIAIGPKDLENNQVEIARRDTLEKSTIPMD 389


>gi|195573301|ref|XP_002104632.1| Aats-glupro [Drosophila simulans]
 gi|194200559|gb|EDX14135.1| Aats-glupro [Drosophila simulans]
          Length = 996

 Score =  158 bits (398), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 76/394 (19%), Positives = 138/394 (35%), Gaps = 65/394 (16%)

Query: 273 WKIFQTLISYMRRKIKD-DYEEINTPQ-VLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           + I++ + ++   +I     +E   P  V    L ++  H   +   +  V  + D+   
Sbjct: 537 FAIWKAIKTWFDAEITRMGVKECYFPIFVSKAVLEKEKTHIADFAPEVAWVTKSGDSDL- 595

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
               A++P +       +   ++SYR+LP+ L ++  V R E        +R R F   +
Sbjct: 596 AEPIAVRPTSETVMYPAYAKWVQSYRDLPIWLNQWNYVVRWEF-MQPTPFLRTREFLWQE 654

Query: 391 AHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMK 449
            H  F  KE+   E L I +L   +Y       ++    T  EK  G D           
Sbjct: 655 GHTAFADKEEAAKEVLDILDLYALVYTHLLAIPVVKGRKTEKEKFAGGD----------- 703

Query: 450 GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNA 508
                                    Y    E       GR  Q  T   +  N    F  
Sbjct: 704 -------------------------YTTTVE-AFISVSGRAIQGATSHHLGQNFSKMFEI 737

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTTITSSA 564
            Y +  +++     +++  +G   R IG+MI     N  L L P    IQAIV     + 
Sbjct: 738 VYEDPETQQKK--YVYQNSWGITTRTIGVMIMVHADNQGLVLPPHVACIQAIVVPCGITV 795

Query: 565 ----------VEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKE 613
                     ++  + +   L    +  E D+R+  +  +K     +K +P+ +  G K+
Sbjct: 796 NTKDDERAQLLDACKALEKRLVGGGVRCEGDYRDNYSPGWKFNHWELKGVPLRLEVGPKD 855

Query: 614 ASERS-IGIRRFGSTTTQKVSLLDA---IPILTK 643
              +  + +R   +     + L D    IP L +
Sbjct: 856 LKAQQLVAVR-RDTGEKITIPLADVEKKIPALLE 888


>gi|255009422|ref|ZP_05281548.1| prolyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
 gi|313147182|ref|ZP_07809375.1| prolyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
 gi|313135949|gb|EFR53309.1| prolyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
          Length = 497

 Score =  158 bits (398), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 66/438 (15%), Positives = 157/438 (35%), Gaps = 73/438 (16%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
              E+  + +  L  + DL   +     ++     G+ I++ +   +    K+  +    
Sbjct: 10  KRSENYSQWYNDLVVKADLAEQSAVRGCMVI-KPYGYAIWEKMQRQLDDMFKETGHVNAY 68

Query: 296 TPQVLDQHLW-QQSGHWDSYRANMFAVKCA-------------DDTIKDLRTFALKPMNC 341
            P ++ +    +++ H + +      V                D   K      ++P + 
Sbjct: 69  FPLLIPKSFLSREAEHVEGFAKECAVVTHYRLKNAEDGSGVVVDPAAKLEEELIIRPTSE 128

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
                 + + ++SYR+LP+   ++ +V+R E        +R   F   + H   T     
Sbjct: 129 TIIWNTYKNWIQSYRDLPILCNQWANVFRWEMR--TRLFLRTAEFLWQEGH---TAHATR 183

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E  +    ++++Y DF                                    +      
Sbjct: 184 EEAEEEAIRMLNVYADF--------------------------------AEKYMAVPVVK 211

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHP 520
            + +      GA      E +++D  G+  Q GT   +  N    F+  +VN  ++  + 
Sbjct: 212 GVKSANERFAGALDTYTIEAMMQD--GKALQSGTSHFLGQNFAKAFDVQFVNKENKLEY- 268

Query: 521 VMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVEY------AQE 570
             +    +G   R +G +I    ++    LP  L+PIQ ++  I  +  +        + 
Sbjct: 269 --VWATSWGVSTRLMGALIMTHSDDNGLVLPPHLAPIQVVIVPIYKNDEQLKQIDAKVEG 326

Query: 571 IANLLKSHHLSIETDF-RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           I   LK+  +S++ D   N+   +K  ++ +K +P+ ++ G ++    ++ + R  +   
Sbjct: 327 IVAKLKALGISVKYDNADNKRPGFKFADYELKGVPVRLVMGGRDLENNTMEVMRRDTLEK 386

Query: 630 QKVS---LLDAIPILTKE 644
           + V+   +   +  L +E
Sbjct: 387 ETVTCDGIETYVQNLLEE 404


>gi|298385691|ref|ZP_06995249.1| proline--tRNA ligase [Bacteroides sp. 1_1_14]
 gi|298261832|gb|EFI04698.1| proline--tRNA ligase [Bacteroides sp. 1_1_14]
          Length = 497

 Score =  158 bits (398), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 65/438 (14%), Positives = 157/438 (35%), Gaps = 73/438 (16%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
              E+  + +  L  + DL   +     ++     G+ I++ +   +    K+  +    
Sbjct: 10  KRSENYSQWYNDLVVKADLAEQSAVRGCMVI-KPYGYAIWEKMQRQLDDMFKETGHVNAY 68

Query: 296 TPQVLDQHLW-QQSGHWDSYRANMFAVKCA-------------DDTIKDLRTFALKPMNC 341
            P ++ +    +++ H + +      V                D   K      ++P + 
Sbjct: 69  FPLLIPKSFLSREAEHVEGFAKECAVVTHYRLKNAEDGSGVVVDPAAKLEEELIIRPTSE 128

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
                 + + ++SYR+LP+   ++ +V+R E        +R   F   + H   T     
Sbjct: 129 TIIWNTYKNWIQSYRDLPILCNQWANVFRWEMR--TRLFLRTAEFLWQEGH---TAHATR 183

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E  +    ++++Y +F                                    +      
Sbjct: 184 EEAEEEAIRMLNVYSEF--------------------------------AEKYMAVPVVK 211

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHP 520
            + +      GA      E +++D  G+  Q GT   +  N    F+  +VN  ++  + 
Sbjct: 212 GVKSANERFAGALDTYTIEAMMQD--GKALQSGTSHFLGQNFAKAFDVQFVNKENKMEY- 268

Query: 521 VMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVEY------AQE 570
             +    +G   R +G +I    ++    LP  L+PIQ ++  I  +  +        + 
Sbjct: 269 --VWATSWGVSTRLMGALIMTHSDDNGLVLPPHLAPIQVVIVPIYKNDEQLKQIDAKVEG 326

Query: 571 IANLLKSHHLSIETDF-RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           I   LK+  +S++ D   N+   +K  ++ +K +P+ ++ G ++    ++ + R  +   
Sbjct: 327 IVAKLKALGISVKYDNADNKRPGFKFADYELKGVPVRLVMGGRDLENNTMEVMRRDTLEK 386

Query: 630 QKVS---LLDAIPILTKE 644
           + V+   +   +  L +E
Sbjct: 387 ETVTCDGIETYVQKLLEE 404


>gi|329764876|ref|ZP_08256467.1| prolyl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
 gi|329138662|gb|EGG42907.1| prolyl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
          Length = 480

 Score =  158 bits (398), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 73/392 (18%), Positives = 142/392 (36%), Gaps = 60/392 (15%)

Query: 270 RKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHLW--QQSGHWDSYRANMFAVKCADDT 327
             G+ I+++L S    K   +        +L       ++  H+  +   +F V  + + 
Sbjct: 43  PDGYSIWESLRSTFDEKFSKNGIRNGFLPILIPESLLGKEKKHFAGFNPEVFWVTHSGEN 102

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
               R  AL+P +      +++  ++S+R+LP+++  + +  R E   +    +R   F 
Sbjct: 103 EVGDR-LALRPTSETLAYTMYSKWIQSWRDLPLKINFWNTALRAEIK-ATKPFLRTSEFL 160

Query: 388 QDDAHVFCT-KEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
             + H     +E+   E +KI  +     +D     ++    +  EK VG          
Sbjct: 161 WQEGHTVHAVQEEAEREVMKILEIYKKTVEDELAIPVITGKKSEKEKFVG---------- 210

Query: 447 IMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSR 505
                                     A Y    E I+ D  G+  Q GT   +  N    
Sbjct: 211 --------------------------AVYTTTMESIMPD--GKALQMGTSHFLGQNFSIP 242

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL----SPIQAIVTTIT 561
           F   + +  + +       +  +G   R IG MI     +  L L    +PIQ ++  I 
Sbjct: 243 FEVKFADKDNVEQ---FAWQTSWGVSWRLIGAMIMVHGDDKGLVLPPKVAPIQVVIVPIY 299

Query: 562 SS------AVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEA 614
            S            EI   L++  + +  D RNE T  YK  +  +K +P+ I  G K+ 
Sbjct: 300 KSDDARNIVFPKLNEIKEQLETKKIRVHVDDRNELTPGYKFNDWELKGVPLRIEIGPKDI 359

Query: 615 SERSIGIRRFGSTTTQKVSLLDA--IPILTKE 644
            ++ I + +  +     +   +   I  + +E
Sbjct: 360 EKQQIVLAKRYNREKISLGFNEIERIGTILEE 391


>gi|89890591|ref|ZP_01202101.1| prolyl-tRNA synthetase [Flavobacteria bacterium BBFL7]
 gi|89517506|gb|EAS20163.1| prolyl-tRNA synthetase [Flavobacteria bacterium BBFL7]
          Length = 492

 Score =  158 bits (398), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 65/439 (14%), Positives = 163/439 (37%), Gaps = 76/439 (17%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
             E   + + +L  + DL   +     ++     G+ I++ + + + R  K+  ++    
Sbjct: 8   RSEDYSKWYNELVVKADLAENSAVRGCMVI-KPYGYAIWEKMQAELDRMFKETGHQNAYF 66

Query: 297 PQVLDQHLWQ-QSGHWDSYRANMFAVKCA--------------DDTIKDLRTFALKPMNC 341
           P  + + L++ +  + + +      V                 D   K      ++P + 
Sbjct: 67  PLFVPKSLFEAEEKNAEGFAKECAVVTHYRLQNDPDNPGKLRVDPEAKLEEELVVRPTSE 126

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQM 400
                 +   ++SYR+LP+ + ++ +V R E        +R   F   + H    TK++ 
Sbjct: 127 AIIWNTYKGWIQSYRDLPLLINQWANVVRWEMR--TRLFLRTAEFLWQEGHTAHSTKKEA 184

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQ 460
             E  +++++     ++F    ++  L T  E+  G+D  +                   
Sbjct: 185 IAEAEQMNDIYADFAQNFMAIPVVKGLKTESERFAGADETY------------------- 225

Query: 461 DRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCH 519
                              E +++D  G+  Q GT   +  N    F+  + +   ++ +
Sbjct: 226 -----------------CIEALMQD--GKALQAGTSHFLGQNFAKAFDVKFTSKEGKQEY 266

Query: 520 PVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVEY------AQ 569
              +    +G   R +G +I    ++    LP  L+P Q ++  I  +  ++        
Sbjct: 267 ---VWATSWGVSTRLMGALIMTHSDDKGLVLPPNLAPNQVVIVPIFKTDEQFEEITTVVN 323

Query: 570 EIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
           E+   L+   ++++ D R+      K  +H ++ +P+ I  G ++    ++ + R  + +
Sbjct: 324 ELMKSLRLKGVTVKYDKRDTLRPGAKFAQHELQGVPLRIAIGARDLENGTVELARRDTLS 383

Query: 629 TQKVSLL---DAIPILTKE 644
               ++    D +  L +E
Sbjct: 384 KVTTAIDGIEDKVVALLEE 402


>gi|332884684|gb|EGK04941.1| prolyl-tRNA synthetase [Dysgonomonas mossii DSM 22836]
          Length = 493

 Score =  158 bits (398), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 65/425 (15%), Positives = 147/425 (34%), Gaps = 70/425 (16%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
             +   + +  L  + DL   +     ++     G+ I++ +   +    K+  +     
Sbjct: 11  RSQDYSQWYLDLVLKADLAENSAVRGCMVI-KPYGYAIWEKMQRQLDDMFKETGHMNAYF 69

Query: 297 PQVLDQHLW-QQSGHWDSYRANMFAVKCA-------------DDTIKDLRTFALKPMNCP 342
           P  + +    +++ H + +      V                D   K      ++P +  
Sbjct: 70  PLFIPKSFLSKEADHVEGFAKECAVVTHYRLKNDPDGKGVIVDPDAKLEEELIVRPTSET 129

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN 402
                + + ++SYR+LP+ + ++ +V R E        +R   F   + H   T      
Sbjct: 130 IIWNTYRNWIQSYRDLPILVNQWANVVRWEMR--TRLFLRTAEFLWQEGH---TAHATKE 184

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
           E ++    ++++Y  F                                  + +       
Sbjct: 185 EAVEEAEKMLNVYAQF--------------------------------AEEYMAVPVIKG 212

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPV 521
           + +      GA      E +++D  G+  Q GT   +  N    F+  + +   +  +  
Sbjct: 213 VKSASERFAGAVDTYTIEAMMQD--GKALQSGTSHFLGQNFAKAFDVKFADKEGKMDY-- 268

Query: 522 MIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVEYA------QEI 571
            +    +G   R IG +I    ++    LP  L+P Q ++  I   A + A        I
Sbjct: 269 -VWATSWGVSTRLIGALIMAHSDDNGLVLPPKLAPFQVVIVPIYKGAEQLALINEKVDGI 327

Query: 572 ANLLKSHHLSIETDF-RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
              LK+  +S++ D   N    +K  E+ +K +P+ +  G ++    ++ + R  + T +
Sbjct: 328 VKSLKALGISVKYDNADNRKPGWKFSEYELKGVPVRLAMGARDMENNTVEVARRDTLTKE 387

Query: 631 KVSLL 635
            VS  
Sbjct: 388 TVSCD 392


>gi|145347579|ref|XP_001418241.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144578470|gb|ABO96534.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 524

 Score =  158 bits (398), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 76/410 (18%), Positives = 152/410 (37%), Gaps = 60/410 (14%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ-HLWQQSGHWDSYRAN 317
            D SG        +  ++ L  +  R+IK+ + E    P  +    L  +  H + +   
Sbjct: 63  YDISGCYILKPWAYAQWEYLKEFFDREIKELEVENCYFPMFVSASRLEAEKDHIEDFAPE 122

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           +  V  + +T  ++   A++P +       +   ++S+R+LP+RL ++ +V R E     
Sbjct: 123 VAWVTRSGNTDLEV-PIAVRPTSETVMYPHYAQWIRSHRDLPLRLNQWCNVVRWEFKHPT 181

Query: 378 HGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
              +R R F   + H  + +K +   E  +I  L   +Y+++    ++    +  EK  G
Sbjct: 182 -PFIRSREFLWQEGHTAYSSKAECDVEVRQILELYRRVYEEYLAVPVVPGKKSEKEKFAG 240

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
            D                                    Y    E  +    GR  Q  T 
Sbjct: 241 GD------------------------------------YTTTVEAYVP-GSGRGVQGATS 263

Query: 497 QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM----IENFKGNLPLWLSP 552
                  ++   F +     K    ++ +  +G   R +G+M     ++    LP  ++P
Sbjct: 264 HCLGQNFAK--MFNIEYEDAKGGRSLVWQNSWGFTTRTLGVMYMVHGDDDGLVLPPKVAP 321

Query: 553 IQAIVTTI-----TSSAVEYAQEIA----NLLKSHHLSIETDFRNE-TINYKIREHSIKK 602
           +QAIV  I     +  A +   EIA      LK+  +  + D R+  T  +K     +K 
Sbjct: 322 VQAIVIPIPNSKLSDEAKQKMDEIATGMCKSLKAAGVRSKLDNRDNYTPGWKYNHWELKG 381

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK--ESLPPDC 650
           +P+ +  G ++    +  I R  +   + V + D     ++  E +  D 
Sbjct: 382 VPMRVEFGARDLETGTCVIARRDTREKETVKIEDLTKRCSELCEQIQKDM 431


>gi|302678395|ref|XP_003028880.1| hypothetical protein SCHCODRAFT_236922 [Schizophyllum commune H4-8]
 gi|300102569|gb|EFI93977.1| hypothetical protein SCHCODRAFT_236922 [Schizophyllum commune H4-8]
          Length = 706

 Score =  158 bits (398), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 74/413 (17%), Positives = 146/413 (35%), Gaps = 68/413 (16%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRAN 317
              SG        + I++ +  +  ++IK    +    P  + Q + + +  H + +   
Sbjct: 229 YSVSGCYILKPWSYSIWEEIQDWFNKEIKKLGVQNSYFPMFVSQSVLEREKDHVEGFSPE 288

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           +  V  A  +       A++P +       ++  ++S+R+LP++L ++ SV R E     
Sbjct: 289 VAWVTRAGQSDLQ-EPIAIRPTSETAMYPYYSKWIQSHRDLPLKLNQWNSVVRWEFKNP- 346

Query: 378 HGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
              +R R F   + H  F TK +   E  +I +L   IY+D                   
Sbjct: 347 QPFLRTREFLWQEGHTAFLTKPEADAEVRQILDLYRQIYEDL------------------ 388

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
                             +       I +      G  Y    E  +  + GR  Q  T 
Sbjct: 389 ------------------LAVPVIPGIKSEKEKFAGGLYTTTIEGFIPTS-GRGIQAATS 429

Query: 497 QVDFNLPSRFNAFYVNSH--SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP-- 552
                  SR   F ++    S+    + + +  +G   R IG+M+     N  L L P  
Sbjct: 430 HCLGQNFSRPEMFNISVEDPSKPNEKLYVWQNSWGLSTRTIGVMVMVHGDNQGLVLPPRV 489

Query: 553 --IQAIVTTITSSA----------VEYAQEIANLLKSHHLSIETDFRN-ETINYKIREHS 599
             IQA++      A           +  + IA  L+   +  + D R+  T  YK  +  
Sbjct: 490 ASIQAVIVPCGIKAGASDEERKSINDKCEAIAQELRDGGVRAKADLRDIYTPGYKFNDWE 549

Query: 600 IKKIPIIIICGDKEASER-SIGIRRFGSTTTQKVSLLD-------AIPILTKE 644
            K +P+ +  G K+  ++ ++ +R   +     + L +        +  + +E
Sbjct: 550 QKGVPLRLEIGPKDLEKKSTLTVR-RDTGAKAPLPLENIAAGVSSLLETIQRE 601


>gi|145220122|ref|YP_001130831.1| prolyl-tRNA synthetase [Prosthecochloris vibrioformis DSM 265]
 gi|259511614|sp|A4SFS0|SYP_PROVI RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|145206286|gb|ABP37329.1| prolyl-tRNA synthetase [Chlorobium phaeovibrioides DSM 265]
          Length = 481

 Score =  158 bits (398), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 61/416 (14%), Positives = 147/416 (35%), Gaps = 58/416 (13%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
            E    + +  L R   L   ++    ++     G+ +++ + + + R  K+  +     
Sbjct: 8   READYSQWYIDLVRSAKLADYSDVRGCMVI-RPNGYAVWEKMQAALDRMFKETGHVNAYF 66

Query: 297 PQVLDQHL-WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P  + +    +++ H + +      V              ++P +     + +   ++SY
Sbjct: 67  PLFIPESFIAKEAEHIEGFAPECAVVTHGGGEEL-AEKLYVRPTSETIIWSSYKKWIQSY 125

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISI 414
           R+LP+ + ++ +V R E        +R   F   + H    T E+   E +++  +  + 
Sbjct: 126 RDLPLLINQWANVVRWEMR--TRLFLRTTEFLWQEGHTAHATPEESQEEVMRMIRVYKTF 183

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            +++    +++   T  EK  G+D  +                                 
Sbjct: 184 AEEYMAMPVIMGRKTDSEKFAGADETY--------------------------------- 210

Query: 475 YGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
                E +++D  G+  Q GT   +  N    F+  +        +   +    +G   R
Sbjct: 211 ---CIEAMMQD--GKALQAGTSHNLGQNFAKAFDCQFQTKEGVLDY---VWATSWGVSTR 262

Query: 534 FIGIMIENFKGNLPLWLSP----IQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETD 585
            IG +I     +  L L P     Q ++  I     ++ +  A+ +A  LK + +    D
Sbjct: 263 LIGALIMAHSDDRGLVLPPKLATRQVVIIPILRGDKAAVLAKAESMAAELKENGIPAFVD 322

Query: 586 FRN-ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
                +  +K  E+ ++ IP+ I  G ++  +      R  +    ++ L   + +
Sbjct: 323 DSEQNSPGWKFAEYELQGIPVRIEVGPRDIDKGVCIAARRDTLEKTELQLDATLAV 378


>gi|260062022|ref|YP_003195102.1| prolyl-tRNA synthetase [Robiginitalea biformata HTCC2501]
 gi|88783584|gb|EAR14755.1| prolyl-tRNA synthetase [Robiginitalea biformata HTCC2501]
          Length = 491

 Score =  157 bits (397), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 69/437 (15%), Positives = 150/437 (34%), Gaps = 73/437 (16%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
             E   + + +L  + DL   +     ++     G+ I++ + + + +  KD  ++    
Sbjct: 8   RSEDYSKWYNELVVKADLAENSGVRGCMVI-KPYGYAIWEKMQAALDKMFKDTGHQNAYF 66

Query: 297 PQVLDQH-LWQQSGHWDSYRANMFAVKCA-------------DDTIKDLRTFALKPMNCP 342
           P  + +  L +++ H + +      V                D   +      ++P +  
Sbjct: 67  PIFIPKSYLSKEASHVEGFAKECAVVTHYRLKNAEDGSGIVVDPEARLEEELIVRPTSET 126

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN 402
                +   ++SYR+LP+ + ++ +V R E        +R   F   + H   T      
Sbjct: 127 IIWDTYRRWIQSYRDLPLLINQWANVVRWEMR--TRLFLRTAEFLWQEGH---TAHATEA 181

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
           E +     I+ +Y  F                                  + +       
Sbjct: 182 EAIAEAETILDVYATF--------------------------------AEEHMAVPVIKG 209

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPV 521
             T      GA      E +++D  G+  Q GT   +  N    F+   V   + +    
Sbjct: 210 TKTAGERFAGAVETYCIEALMQD--GKALQAGTSHFLGQNFAKAFD---VKFDNTEGQQE 264

Query: 522 MIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVEY------AQEI 571
            +    +G   R +G +I    ++    LP  L+PIQ ++  I     +          +
Sbjct: 265 YVWATSWGVSTRLMGALIMTHSDDNGLVLPPKLAPIQVVIVPIYRGQEQLEAISAVVNPL 324

Query: 572 ANLLKSHHLSIETDFRN-ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
           A  L+   +S++ D R+     +K  E+ +K +P+ +  G ++ +  +  + R  +   Q
Sbjct: 325 AARLRDRGISVKYDDRDTHKPGFKFNEYELKGVPVRLGVGPRDLANGTFEVARRDTLEKQ 384

Query: 631 KVS---LLDAIPILTKE 644
            V    + + I  L  E
Sbjct: 385 VVPAEGIEEYIGNLLGE 401


>gi|194334392|ref|YP_002016252.1| prolyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271]
 gi|259511613|sp|B4S9D5|SYP_PROA2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|194312210|gb|ACF46605.1| prolyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271]
          Length = 481

 Score =  157 bits (397), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 68/430 (15%), Positives = 151/430 (35%), Gaps = 62/430 (14%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
           + + +   E    + +  L R   L   + D  G +     G+ I++ + + +    K  
Sbjct: 1   MAEKITLRETDYSQWYIDLVRSAKLADYS-DVRGCMIIRPNGYAIWEKMQAALDAMFKAT 59

Query: 290 DYEEINTPQVLDQHL-WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
            +     P  + +    +++ H + +      V              ++P +     + +
Sbjct: 60  GHVNAYFPLFIPESFIKKEAEHIEGFAPECAVVTHGGGEQL-AENLYVRPTSETIIWSSY 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKI 407
              ++SYR+LP+ + ++ +V R E        +R   F   + H    T  +   E +++
Sbjct: 119 KKWIQSYRDLPILINQWANVVRWEMR--TRLFLRTTEFLWQEGHTAHATSTEAQEEVMRM 176

Query: 408 HNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGV 467
            N+  +  +++    +++   T  EK  G+   W                          
Sbjct: 177 INVYKTFAEEYMALPVIMGRKTESEKFAGAVETW-------------------------- 210

Query: 468 LLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
                       E +++D   +  Q GT   +  N    F+  + +      +   +   
Sbjct: 211 ----------CIEAMMQD--KKALQAGTSHNLGQNFAKAFDCRFQSKEGALEY---VWAT 255

Query: 527 VFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTTI----TSSAVEYAQEIANLLKSH 578
            +G   R IG +I     +  L L P     Q ++  I     S+ +E A+ IA  L   
Sbjct: 256 SWGVSTRLIGALIMAHSDDRGLVLPPKLATRQVVIIPILKGDISAVIEKARSIAAELNQK 315

Query: 579 HLSIETDFRN-ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV----S 633
            ++   D  +  +  +K  E+ ++ IP+ +  G ++    +    R  +    K+    S
Sbjct: 316 GIAAFVDDSDQNSPGWKFAEYELQGIPVRLELGPRDIQSSTCIAARRDTGEKSKLQLDSS 375

Query: 634 LLDAIPILTK 643
           L D I  L +
Sbjct: 376 LADQINSLLE 385


>gi|15228692|ref|NP_191771.1| tRNA synthetase class II (G, H, P and S) family protein
           [Arabidopsis thaliana]
 gi|30695549|ref|NP_850736.1| tRNA synthetase class II (G, H, P and S) family protein
           [Arabidopsis thaliana]
 gi|6899922|emb|CAB71872.1| multifunctional aminoacyl-tRNA ligase-like protein [Arabidopsis
           thaliana]
 gi|16648885|gb|AAL24294.1| multifunctional aminoacyl-tRNA ligase-like protein [Arabidopsis
           thaliana]
 gi|22136084|gb|AAM91120.1| multifunctional aminoacyl-tRNA ligase-like protein [Arabidopsis
           thaliana]
 gi|332646791|gb|AEE80312.1| prolyl-tRNA synthetase [Arabidopsis thaliana]
 gi|332646792|gb|AEE80313.1| prolyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 530

 Score =  157 bits (397), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 67/416 (16%), Positives = 145/416 (34%), Gaps = 61/416 (14%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTP----QV 299
             + ++ ++  +     D SG          I++ +  +   +IK    ++        V
Sbjct: 60  EWYSEVCKQDMI--EYYDISGCYILRPWSMAIWEIMQIFFDAEIKK--MKVKNCYFPLFV 115

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               L ++  H + +   +  V  +  +  ++   A++P +       ++  ++ +R+LP
Sbjct: 116 SPGVLEKEKDHIEGFAPEVAWVTKSGKSDLEV-PIAIRPTSETVMYPYYSKWIRGHRDLP 174

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDF 418
           ++L ++ +V R E S      +R R F   + H  F TK +   E L+I  L   IY+  
Sbjct: 175 LKLNQWCNVVRWEFSNPT-PFIRSREFLWQEGHTAFATKAEADEEVLQILELYRRIYE-- 231

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
                                             + +       + +      G  Y   
Sbjct: 232 ----------------------------------EYLAVPVVKGMKSENEKFAGGLYTTS 257

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E  + +  GR  Q  T        ++   F +N  +EK    M+ +  +    R IG+M
Sbjct: 258 VEAFIPNT-GRGVQGATSHCLGQNFAK--MFEINFENEKAETEMVWQNSWAYSTRTIGVM 314

Query: 539 IENFKGNLPLWLSP----IQAIVTTI------TSSAVEYAQEIANLLKSHHLSIETDFRN 588
           I     +  L L P    +Q +V  +      T    +     A+ L    +  E D R+
Sbjct: 315 IMTHGDDKGLVLPPKVASVQVVVIPVPYKDANTQGIYDACTATASALCEAGIRAEEDLRD 374

Query: 589 E-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             +  +K  +  +K +P+ I  G ++     +   R  +   + +     +  + +
Sbjct: 375 NYSPGWKYSDWEMKGVPLRIEIGPRDLENDQVRTVRRDNGVKEDIPRGSLVEHVKE 430


>gi|237716484|ref|ZP_04546965.1| prolyl-tRNA synthetase [Bacteroides sp. D1]
 gi|255691705|ref|ZP_05415380.1| proline--tRNA ligase [Bacteroides finegoldii DSM 17565]
 gi|262408082|ref|ZP_06084630.1| prolyl-tRNA synthetase [Bacteroides sp. 2_1_22]
 gi|294809476|ref|ZP_06768179.1| proline--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
 gi|298484158|ref|ZP_07002324.1| proline--tRNA ligase [Bacteroides sp. D22]
 gi|299145587|ref|ZP_07038655.1| proline--tRNA ligase [Bacteroides sp. 3_1_23]
 gi|229444131|gb|EEO49922.1| prolyl-tRNA synthetase [Bacteroides sp. D1]
 gi|260622644|gb|EEX45515.1| proline--tRNA ligase [Bacteroides finegoldii DSM 17565]
 gi|262354890|gb|EEZ03982.1| prolyl-tRNA synthetase [Bacteroides sp. 2_1_22]
 gi|294443294|gb|EFG12058.1| proline--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
 gi|295084169|emb|CBK65692.1| prolyl-tRNA synthetase [Bacteroides xylanisolvens XB1A]
 gi|298269662|gb|EFI11257.1| proline--tRNA ligase [Bacteroides sp. D22]
 gi|298516078|gb|EFI39959.1| proline--tRNA ligase [Bacteroides sp. 3_1_23]
          Length = 497

 Score =  157 bits (397), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 65/438 (14%), Positives = 157/438 (35%), Gaps = 73/438 (16%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
              E+  + +  L  + DL   +     ++     G+ I++ +   +    K+  +    
Sbjct: 10  KRSENYSQWYNDLVVKADLAEQSAVRGCMVI-KPYGYAIWEKMQRQLDDMFKETGHVNAY 68

Query: 296 TPQVLDQHLW-QQSGHWDSYRANMFAVKCA-------------DDTIKDLRTFALKPMNC 341
            P ++ +    +++ H + +      V                D   K      ++P + 
Sbjct: 69  FPLLIPKSFLSREAEHVEGFAKECAVVTHYRLKNAEDGSGVVVDPAAKLEEELIIRPTSE 128

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
                 + + ++SYR+LP+   ++ +V+R E        +R   F   + H   T     
Sbjct: 129 TIIWNTYKNWIQSYRDLPILCNQWANVFRWEMR--TRLFLRTAEFLWQEGH---TAHATR 183

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E  +    ++++Y +F                                    +      
Sbjct: 184 EEAEEEAIRMLNVYGEF--------------------------------AEKYMAVPVVK 211

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHP 520
            + +      GA      E +++D  G+  Q GT   +  N    F+  +VN  ++  + 
Sbjct: 212 GVKSANERFAGALDTYTIEAMMQD--GKALQSGTSHFLGQNFAKAFDVQFVNKENKLEY- 268

Query: 521 VMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVEY------AQE 570
             +    +G   R +G +I    ++    LP  L+PIQ ++  I  +  +        + 
Sbjct: 269 --VWATSWGVSTRLMGALIMTHSDDNGLVLPPHLAPIQVVIVPIYKNDEQLKQIDAKVEG 326

Query: 571 IANLLKSHHLSIETDF-RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           I   LK+  +S++ D   N+   +K  ++ +K +P+ ++ G ++    ++ + R  +   
Sbjct: 327 IVAKLKALGISVKYDNADNKRPGFKFADYELKGVPVRLVMGGRDLENNTMEVMRRDTLEK 386

Query: 630 QKVS---LLDAIPILTKE 644
           + V+   +   +  L +E
Sbjct: 387 ETVTCEGIETYVQNLLEE 404


>gi|146283154|ref|YP_001173307.1| prolyl-tRNA synthetase [Pseudomonas stutzeri A1501]
 gi|166980144|sp|A4VNB4|SYP_PSEU5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|145571359|gb|ABP80465.1| prolyl-tRNA synthetase [Pseudomonas stutzeri A1501]
          Length = 571

 Score =  157 bits (397), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 51/248 (20%), Positives = 96/248 (38%), Gaps = 11/248 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++    H+ + R   +  +A   SG+  W   G +  +   + +R 
Sbjct: 3   TSQFLLSTLKETPSDAVVISHQLMLRAGMIRKLA---SGLYTWMPMGLRALRKAEAIVRE 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P +    LWQ+SG W+ Y   +  +K   D     R F + P +    
Sbjct: 60  EMNKAGALEVLMPAIQPAELWQESGRWEQYGPELLRLKDRHD-----REFCVGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+   +  + +R+E      GLMR R F   DA+ F   ++   E 
Sbjct: 115 TDLARNELNSYKQLPINFYQIQTKFRDEIRPRF-GLMRGREFLMKDAYSFHLNQESLQET 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             ++H    +I+   G     V+  T      GS      AE+    +  +  +     I
Sbjct: 174 YDRMHQAYCNIFTRLGLNFRPVQADTGSIGGTGSHEFHVLAESGEDDIAFSDSSDYAANI 233

Query: 464 NTGVLLGE 471
                +  
Sbjct: 234 EKAEAIPR 241



 Score = 77.9 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 59/167 (35%), Gaps = 12/167 (7%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
            I R  + G I Q+        N   +  + +    +M    +   + R +   IE    
Sbjct: 402 VIKRGIEVGHIFQLGTKYSEAMNCQVMGENGKPATLIMGCYGI--GVSRVVAAAIEQNYD 459

Query: 545 N----LPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNET--INYKI 595
                 P  L+P Q  +  +   T +  E   ++   L +    +  D R++      K 
Sbjct: 460 ERGILWPDALAPFQIALVPMKYETEAVREATDKLYAELTAAGYEVLLDDRDKKTSPGVKF 519

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +  +  IP  I+  D+  ++  +  +       Q+V++ D +  + 
Sbjct: 520 ADMELIGIPHRIVVSDRGLADGMLEYKHRRDAQPQQVAVSDILSFIN 566


>gi|260170261|ref|ZP_05756673.1| prolyl-tRNA synthetase [Bacteroides sp. D2]
 gi|315918623|ref|ZP_07914863.1| prolyl-tRNA synthetase [Bacteroides sp. D2]
 gi|313692498|gb|EFS29333.1| prolyl-tRNA synthetase [Bacteroides sp. D2]
          Length = 497

 Score =  157 bits (397), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 65/438 (14%), Positives = 157/438 (35%), Gaps = 73/438 (16%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
              E+  + +  L  + DL   +     ++     G+ I++ +   +    K+  +    
Sbjct: 10  KRSENYSQWYNDLVVKADLAEQSAVRGCMVI-KPYGYAIWEKMQRQLDDMFKETGHVNAY 68

Query: 296 TPQVLDQHLW-QQSGHWDSYRANMFAVKCA-------------DDTIKDLRTFALKPMNC 341
            P ++ +    +++ H + +      V                D   K      ++P + 
Sbjct: 69  FPLLIPKSFLSREAEHVEGFAKECAVVTHYRLKNAEDGSGVVVDPAAKLEEELIIRPTSE 128

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
                 + + ++SYR+LP+   ++ +V+R E        +R   F   + H   T     
Sbjct: 129 TIIWNTYKNWIQSYRDLPILCNQWANVFRWEMR--TRLFLRTAEFLWQEGH---TAHATR 183

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E  +    ++++Y +F                                    +      
Sbjct: 184 EEAEEEAIRMLNVYGEF--------------------------------AEKYMAVPVVK 211

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHP 520
            + +      GA      E +++D  G+  Q GT   +  N    F+  +VN  ++  + 
Sbjct: 212 GVKSANERFAGALDTYTIEAMMQD--GKALQSGTSHFLGQNFAKAFDVQFVNKENKMEY- 268

Query: 521 VMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVEY------AQE 570
             +    +G   R +G +I    ++    LP  L+PIQ ++  I  +  +        + 
Sbjct: 269 --VWATSWGVSTRLMGALIMTHSDDNGLVLPPHLAPIQVVIVPIYKNDEQLKQIDAKVEG 326

Query: 571 IANLLKSHHLSIETDF-RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           I   LK+  +S++ D   N+   +K  ++ +K +P+ ++ G ++    ++ + R  +   
Sbjct: 327 IVAKLKALGISVKYDNADNKRPGFKFADYELKGVPVRLVMGGRDLENNTMEVMRRDTLEK 386

Query: 630 QKVS---LLDAIPILTKE 644
           + V+   +   +  L +E
Sbjct: 387 ETVTCEGIETYVQNLLEE 404


>gi|108803928|ref|YP_643865.1| prolyl-tRNA synthetase [Rubrobacter xylanophilus DSM 9941]
 gi|123069165|sp|Q1AX25|SYP_RUBXD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|108765171|gb|ABG04053.1| prolyl-tRNA synthetase [Rubrobacter xylanophilus DSM 9941]
          Length = 476

 Score =  157 bits (397), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 72/421 (17%), Positives = 148/421 (35%), Gaps = 59/421 (14%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
              E   R + +L R   L                G+ I++ + + +  + K   +    
Sbjct: 10  KKSEDSSRWYLELVRMAKLADYGPVRGTFAI-RPYGFAIWERIQADLDARFKATGHVNAY 68

Query: 296 TPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
            P ++ +    +++ H + +      V    D   + R  A++P +       +   + S
Sbjct: 69  FPLLIPESYLTKEAEHVEGFAPECAWVTVGGDDELEER-LAIRPTSESIICDFYRKWIHS 127

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC-LKIHNLIIS 413
           YR+LPV + ++ +V R E        +R   F   + H      +   E  L++ N+   
Sbjct: 128 YRDLPVLINQWCNVLRWEM--VTRPFLRTAEFLWQEGHTVHATAEEAREEALRMLNVYRD 185

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
            + +     ++  + +  E+  G+   +                                
Sbjct: 186 CFYEVLAIPVLTGMKSPSERFAGAVETF-------------------------------- 213

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
                 E ++ D  GR  Q  T   +  N    F+  +++ + E+ HP   ++  +G   
Sbjct: 214 ----TCEGLMGD--GRALQAATSHDLGQNFARAFDITFLDENQERVHP---YQTSWGFST 264

Query: 533 RFIGIMI----ENFKGNLPLWLSPIQAIVTTI-----TSSAVEYAQEIANLLKSHHLSIE 583
           R IG +I    ++    LP  L+P QA+V  I            A+ +   L    L  E
Sbjct: 265 RTIGALILVHGDDRGLRLPPKLAPTQAVVVPIWRGKNKGEVRREAEALHRELAEAGLRAE 324

Query: 584 TDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            D   E +  +K  EH ++ +P+ +  G K+  +    + R  +   + V    A   L 
Sbjct: 325 ADLDEEHSPGWKFNEHELRGVPVRVELGPKDIEKGQAVLVRRDTGEKEFVGRGAAARRLV 384

Query: 643 K 643
           +
Sbjct: 385 E 385


>gi|148887019|sp|Q0SAY4|SYP2_RHOSR RecName: Full=Prolyl-tRNA synthetase 2; AltName: Full=Proline--tRNA
           ligase 2; Short=ProRS 2
          Length = 479

 Score =  157 bits (397), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 67/380 (17%), Positives = 143/380 (37%), Gaps = 58/380 (15%)

Query: 270 RKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHLW--QQSGHWDSYRANMFAVKCADDT 327
             G+++++ L S + R+IKD   E     +L    +  +++ H + +   +  V      
Sbjct: 42  PYGYRLWELLQSELDRRIKDTGHENAYFPLLIPESYLGREAEHVEGFSPELAVVTHVGGK 101

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
           + +     ++P +      +    + S+R+LP+ L ++ +V R E    +   +R   F 
Sbjct: 102 VLE-EPLVVRPTSETIIGEMMAKWISSHRDLPLLLNQWANVVRWELRPRM--FLRTTEFL 158

Query: 388 QDDAHVFCTKEQMFNE-CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
             + H     E       +   ++   + ++     ++    T  E+  G+ A +     
Sbjct: 159 WQEGHTAHVDEASARRETMLALDIYHEVARELAAIPVVPGEKTPGERFAGAVATY----- 213

Query: 447 IMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF 506
                                            E +++D  GR  Q GT      +  +F
Sbjct: 214 -------------------------------TIEGMMRD--GRALQSGTSHY---MGIKF 237

Query: 507 -NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTIT 561
            +AF +   SE     + H   +G   R IG ++     +     P  L+P Q ++  IT
Sbjct: 238 ASAFDIRFTSETGREELCHTTSWGMSTRMIGGIVMTHGDDKGLVFPPRLAPHQVVIVPIT 297

Query: 562 ----SSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASE 616
                +    A E+A+ L+S  +    D R   T  +K  E  ++ +P+ +  G ++  +
Sbjct: 298 RGGNVAVEGAADELAHRLRSVGVRTHVDARPHLTPGFKYNEWEMRGVPVRLELGPRDLED 357

Query: 617 RSI-GIRRFGSTTTQKVSLL 635
            ++  ++R G    Q V + 
Sbjct: 358 GTVMMVKRLGDDGKQAVPID 377


>gi|29346339|ref|NP_809842.1| prolyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
 gi|81445136|sp|Q8A988|SYP_BACTN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|29338234|gb|AAO76036.1| prolyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
          Length = 497

 Score =  157 bits (397), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 65/438 (14%), Positives = 157/438 (35%), Gaps = 73/438 (16%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
              E+  + +  L  + DL   +     ++     G+ I++ +   +    K+  +    
Sbjct: 10  KRSENYSQWYNDLVVKADLAEQSAVRGCMVI-KPYGYAIWEKMQRQLDDMFKETGHVNAY 68

Query: 296 TPQVLDQHLW-QQSGHWDSYRANMFAVKCA-------------DDTIKDLRTFALKPMNC 341
            P ++ +    +++ H + +      V                D   K      ++P + 
Sbjct: 69  FPLLIPKSFLSREAEHVEGFAKECAVVTHYRLKNAEDGSGVVVDPAAKLEEELIIRPTSE 128

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
                 + + ++SYR+LP+   ++ +V+R E        +R   F   + H   T     
Sbjct: 129 TIIWNTYKNWIQSYRDLPILCNQWANVFRWEMR--TRLFLRTAEFLWQEGH---TAHATR 183

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E  +    ++++Y +F                                    +      
Sbjct: 184 EEAEEEAIRMLNVYGEF--------------------------------AEKYMAVPVVK 211

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHP 520
            + +      GA      E +++D  G+  Q GT   +  N    F+  +VN  ++  + 
Sbjct: 212 GVKSANERFAGALDTYTIEAMMQD--GKALQSGTSHFLGQNFAKAFDVQFVNKENKMEY- 268

Query: 521 VMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVEY------AQE 570
             +    +G   R +G +I    ++    LP  L+PIQ ++  I  +  +        + 
Sbjct: 269 --VWATSWGVSTRLMGALIMTHSDDNGLVLPPHLAPIQVVIVPIYKNDEQLKQIDAKVEG 326

Query: 571 IANLLKSHHLSIETDF-RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           I   LK+  +S++ D   N+   +K  ++ +K +P+ ++ G ++    ++ + R  +   
Sbjct: 327 IVAKLKALGISVKYDNADNKRPGFKFADYELKGVPVRLVMGGRDLENNTMEVMRRDTLEK 386

Query: 630 QKVS---LLDAIPILTKE 644
           + V+   +   +  L +E
Sbjct: 387 ETVTCDGIETYVQKLLEE 404


>gi|327481520|gb|AEA84830.1| prolyl-tRNA synthetase [Pseudomonas stutzeri DSM 4166]
          Length = 571

 Score =  157 bits (397), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 51/248 (20%), Positives = 97/248 (39%), Gaps = 11/248 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++    H+ + R   +  +A   SG+  W   G +  +   + +R 
Sbjct: 3   TSQFLLSTLKETPSDAVVISHQLMLRAGMIRKLA---SGLYTWMPMGLRALRKAEAIVRE 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P +    LWQ+SG W+ Y   +  +K   D     R F + P +    
Sbjct: 60  EMNKAGALEVLMPAIQPAELWQESGRWEQYGPELLRLKDRHD-----REFCVGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNE 403
             +  + L SY++LP+   +  + +R+E      GLMR R F   DA+ F  ++E +   
Sbjct: 115 TDLARNELNSYKQLPINFYQIQTKFRDEIRPRF-GLMRGREFLMKDAYSFHLSQESLQET 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             ++H    +I+   G     V+  T      GS      AE+    +  +  +     I
Sbjct: 174 YDRMHQAYCNIFTRLGLNFRPVQADTGSIGGTGSHEFHVLAESGEDDIAFSDSSDYAANI 233

Query: 464 NTGVLLGE 471
                +  
Sbjct: 234 EKAEAIPR 241



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 58/170 (34%), Gaps = 12/170 (7%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
            I R  + G I Q+        N   +  + +    +M    +   + R +   IE    
Sbjct: 402 VIKRGIEVGHIFQLGTKYSEAMNCQVMGENGKPATLIMGCYGI--GVSRVVAAAIEQNYD 459

Query: 545 N----LPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNET--INYKI 595
                 P  L+P Q  +  +   T +  E   ++   L +    +  D R++      K 
Sbjct: 460 ERGILWPDALAPFQIALVPMKYETEAVREATDKLYAELTAAGYEVLLDDRDKKTSPGVKF 519

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
            +  +  IP  I+  D+  ++  +  +       Q V+  + +  +   +
Sbjct: 520 ADMELIGIPHRIVVSDRGLADGMLEYKHRRDAQPQPVAASEILSFINSRA 569


>gi|110005463|emb|CAK99785.1| prolyl-trna synthetase protein [Spiroplasma citri]
          Length = 474

 Score =  157 bits (397), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 73/389 (18%), Positives = 152/389 (39%), Gaps = 53/389 (13%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLW-QQSGHWDSYRANMFAV 321
           G   +   G++I++ +   +  + K +  + +  P ++ + L+ ++  H + +   +  V
Sbjct: 36  GTTIFKPYGYEIWENIQKILDAEFKKNGVKNVYFPLLIPKTLFNKEKEHIEGFSPEIATV 95

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
               D + D   + ++P +       F+  ++ YR+LP+   ++ +V R E   +    +
Sbjct: 96  TKVGDKVLDEELY-IRPTSEVLFGTFFSKEIQGYRDLPLLYNQWVNVLRWEK--TTRPFL 152

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALW 441
           R   F   + H   +      E  +    I+ IY  F                       
Sbjct: 153 RTSEFLWQEGHTIHS---SKQEAQQFTLKILDIYATF----------------------- 186

Query: 442 DDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFN 501
             AE  +  +L  IK    +R         GA      E ++ D  G+  QCGT      
Sbjct: 187 --AEKTL--LLPVIKGQKTEREKFA-----GAEETYTIESLMYD--GQALQCGTSHYFGQ 235

Query: 502 LPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIV 557
             S+  AF +   ++K      +   +G   R IG +I    ++    LP  ++PIQ ++
Sbjct: 236 NFSK--AFDIKFANQKNTLEYAYSTSWGVSTRLIGGIIMTHSDDNGLVLPPQIAPIQIMI 293

Query: 558 TTITSSAVEY---AQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
             I + + E    AQ++   L+      E D  ++   ++     IK IP+ I  G ++ 
Sbjct: 294 LPINNDSNEQLSAAQQLQKKLQK--YRCEIDQSDKGFGFRATNAEIKGIPLRIEIGPRDL 351

Query: 615 SERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +++ + I R  +     VS  +   +++ 
Sbjct: 352 AQQQVTIARRDTFEKITVSWAEVEKVVSD 380


>gi|239994929|ref|ZP_04715453.1| prolyl-tRNA synthetase [Alteromonas macleodii ATCC 27126]
          Length = 440

 Score =  157 bits (397), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 57/270 (21%), Positives = 109/270 (40%), Gaps = 15/270 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L        ++E   H+ + R   +  +A   SG+  W   G ++   + + +R 
Sbjct: 3   TSQYLLATQKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPSGLRVLNKVANIVRE 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LW++SG W+ Y   +  +K      +  R F L P +    
Sbjct: 60  EMNKAGAIEVLMPVVQPADLWEESGRWEEYGPELLRIKD-----RHQRDFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
            A+  + + SY++LP+ L +  + +R+E      G+MR R FT  DA+ F  ++    E 
Sbjct: 115 TALVRNEISSYKQLPLNLYQIQTKFRDEVRPRF-GIMRGREFTMKDAYSFHLEDSCLEET 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             K+++   +I+   G +   V   +       S      A +    +  +  +     +
Sbjct: 174 YQKMYDAYCNIFSRMGLDFRAVIADSGSIGGNHSHEFHVLAASGEDDIAFSSDSDYAANV 233

Query: 464 N--TGVLLGEGAFYGPKFEYILKDAIGRDW 491
                V   +    G   E   KDA G+D+
Sbjct: 234 EMAEAVAPEKAVASGAAVE--TKDAKGKDF 261


>gi|308048689|ref|YP_003912255.1| prolyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
 gi|307630879|gb|ADN75181.1| prolyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
          Length = 570

 Score =  157 bits (397), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 65/329 (19%), Positives = 116/329 (35%), Gaps = 16/329 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       ++E   H+ + R   +  +A    G+  W   G ++ + + + +R 
Sbjct: 3   TSQTLISTMKETPSDAEIVSHQLMMRAGMIRKLAA---GLYTWLPSGLRVLRKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E   P V    LWQ++G WD   A M  +K   D     R F L P +    
Sbjct: 60  EMNRAGAVETLMPVVQPADLWQETGRWDDMGAEMARLKDRHD-----RDFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
             +  + +KSY++LP+ L +  + +R+E      G+MR R F   DA+ F    E M   
Sbjct: 115 TDLVRNEIKSYKQLPINLYQIQTKFRDERRPRF-GVMRAREFLMKDAYSFHLDQETMDET 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +++    I +  G     V   T       S      A++    +  + ++     I
Sbjct: 174 YQAMYDAYCRILERMGLAYRPVLADTGAIGGSHSHEFQVLAQSGEDAIAYSTESDYAANI 233

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
                L  G       E  L D          +        +     +    E     ++
Sbjct: 234 EKAEALALGERGEATQEMTLVDTPNAKTIAELVAQFDLAIEKTVKTLIVKAVEGAEHELV 293

Query: 524 HRAVFGSIERFIGIMIENFKGNLPLWLSP 552
              V G  E     + E     LPL  +P
Sbjct: 294 ALMVRGDHE-----LNEVKAEKLPLVAAP 317



 Score = 91.8 bits (226), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 25/162 (15%), Positives = 60/162 (37%), Gaps = 9/162 (5%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I Q+        NA  ++ +  K  P+++     G        + +N      
Sbjct: 406 RGIEVGHIFQLGTKYSESMNATVLDPNG-KATPLIMGCYGVGVSRIVAAAIEQNHDDRGI 464

Query: 548 LWL---SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +W    +P Q  +  +    +    E A+++   L +  + +  D R E       +H +
Sbjct: 465 IWPDAIAPYQVAILPMNMHKSHRVAELAEKLYAELTAAGIEVLFDDRKERPGVMFADHEL 524

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             IP  I+ GD+   + ++  +   +    ++++   +    
Sbjct: 525 IGIPHTIVIGDRGIDDGNVEYKVRKTGEKSELAIDQVVEFFK 566


>gi|331007686|ref|ZP_08330821.1| Prolyl-tRNA synthetase [gamma proteobacterium IMCC1989]
 gi|330418506|gb|EGG93037.1| Prolyl-tRNA synthetase [gamma proteobacterium IMCC1989]
          Length = 579

 Score =  157 bits (397), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 46/241 (19%), Positives = 92/241 (38%), Gaps = 11/241 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + +   +R 
Sbjct: 3   ASRFLLSTSKETPADAEVISHQLMLRAGLVRKLA---SGLYTWMPLGLRVLRKVEHIIRE 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +E+  P V    LWQ+SG W  Y   +  +K      +  R F L P +    
Sbjct: 60  EMNKSGAQEVLMPVVQPAELWQESGRWQEYGPELLRIKD-----RHQREFCLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + + SY++LP    +  + +R+E      G+MR R F   DA+ F   +    + 
Sbjct: 115 TDLVRNDVNSYKQLPANFYQIQTKFRDEIRPRF-GIMRSREFIMKDAYSFHIDQASLQDT 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +H    +I+   G +   V          GS      A +    +  +  +     +
Sbjct: 174 YDVMHQTYCNIFDRIGLDYRPVIADNGSIGGSGSHEFHVLASSGEDDIAFSDGSDYAANV 233

Query: 464 N 464
            
Sbjct: 234 E 234



 Score = 79.4 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/168 (16%), Positives = 60/168 (35%), Gaps = 10/168 (5%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           I R  + G I Q+        NA  ++ +  K   + +     G        + +N   N
Sbjct: 412 IKRGIEVGHIFQLGTKYSESMNATVLDQNG-KAQAITMGCYGIGVTRVVAAAIEQNHDDN 470

Query: 546 LPLW---LSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIET-DFRNETINYKIRE 597
             +W   L+P Q  +  I    +++  E    +   L++    +   D     +   + +
Sbjct: 471 GIIWPSALAPFQVALIPINAHKSAAVSEKCDVLYKELQAAGYDVIYMDEPKARLGVMLAD 530

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
             +  IP  I+ GD+      +  +    +  Q++     +  LT ++
Sbjct: 531 TELVGIPHRIVVGDRGLENGQVEYKGRRDSEKQEIDAGSVVDFLTAQA 578


>gi|237720697|ref|ZP_04551178.1| prolyl-tRNA synthetase [Bacteroides sp. 2_2_4]
 gi|293373969|ref|ZP_06620310.1| proline--tRNA ligase [Bacteroides ovatus SD CMC 3f]
 gi|229449532|gb|EEO55323.1| prolyl-tRNA synthetase [Bacteroides sp. 2_2_4]
 gi|292631045|gb|EFF49682.1| proline--tRNA ligase [Bacteroides ovatus SD CMC 3f]
          Length = 497

 Score =  157 bits (397), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 65/438 (14%), Positives = 157/438 (35%), Gaps = 73/438 (16%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
              E+  + +  L  + DL   +     ++     G+ I++ +   +    K+  +    
Sbjct: 10  KRSENYSQWYNDLVVKADLAEQSAVRGCMVI-KPYGYAIWEKMQRQLDDMFKETGHVNAY 68

Query: 296 TPQVLDQHLW-QQSGHWDSYRANMFAVKCA-------------DDTIKDLRTFALKPMNC 341
            P ++ +    +++ H + +      V                D   K      ++P + 
Sbjct: 69  FPLLIPKSFLSREAEHVEGFAKECAVVTHYRLKNAEDGSGVVVDPAAKLEEELIIRPTSE 128

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
                 + + ++SYR+LP+   ++ +V+R E        +R   F   + H   T     
Sbjct: 129 TIIWNTYKNWIQSYRDLPILCNQWANVFRWEMR--TRLFLRTAEFLWQEGH---TAHATR 183

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E  +    ++++Y +F                                    +      
Sbjct: 184 EEAEEEAIRMLNVYGEF--------------------------------AEKYMAVPVVK 211

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHP 520
            + +      GA      E +++D  G+  Q GT   +  N    F+  +VN  ++  + 
Sbjct: 212 GVKSANERFAGALDTYTIEAMMQD--GKALQSGTSHFLGQNFAKAFDVQFVNKENKLEY- 268

Query: 521 VMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVEY------AQE 570
             +    +G   R +G +I    ++    LP  L+PIQ ++  I  +  +        + 
Sbjct: 269 --VWATSWGVSTRLMGALIMTHSDDNGLVLPPHLAPIQVVIVPIYKNDEQLKQIDAKVEG 326

Query: 571 IANLLKSHHLSIETDF-RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           I   LK+  +S++ D   N+   +K  ++ +K +P+ ++ G ++    ++ + R  +   
Sbjct: 327 IVAKLKALGISVKYDNADNKRPGFKFADYELKGVPVRLVMGGRDLENNTMEVMRRDTLEK 386

Query: 630 QKVS---LLDAIPILTKE 644
           + V+   +   +  L +E
Sbjct: 387 ETVTCEGIETYVQNLLEE 404


>gi|226291914|gb|EEH47342.1| prolyl-tRNA synthetase [Paracoccidioides brasiliensis Pb18]
          Length = 629

 Score =  157 bits (397), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 81/420 (19%), Positives = 155/420 (36%), Gaps = 67/420 (15%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRAN 317
            D SG        + I++T+ ++   KIK    +  + P  + + +  ++  H + + A 
Sbjct: 120 YDVSGCFILKPHSYFIWETIQTWFNDKIKKMGVKNCSFPLFVSEDVLNKEKDHIEGFAAE 179

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           +  V  A ++ K  R  A++P +       +   ++S+R+LP+RL ++ SV R E     
Sbjct: 180 VAWVTHAGNS-KLERKIAIRPTSETVMYPYYAKWIRSHRDLPLRLNQWNSVVRWEFKNP- 237

Query: 378 HGLMRVRGFTQDDAHVFCTKEQMFN-ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
              +R R F   + H     E     E L+I      +Y++     ++    T  EK  G
Sbjct: 238 QPFLRTREFLWQEGHTAHLTEAAAREEVLQILEHYAHVYEELLAVPVIRGQKTEKEKFAG 297

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
                                                 Y    E  +  A GR  Q GT 
Sbjct: 298 G------------------------------------LYTTTVEGYIP-ATGRGIQGGTS 320

Query: 497 Q-VDFNLPSRFNAFYVNSH---SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
             +  N    F     +      EK   + + +  +G   R IGIM+     +  L L P
Sbjct: 321 HGLGQNFSKMFGITVEDPSAKPDEKKPALHVWQNSWGLSTRTIGIMVMVHGDDRGLVLPP 380

Query: 553 ----IQAIVTTIT--------SSAVEYAQ--EIANLLKSHHLSIETDFRNETINYKIREH 598
               +Q ++  +           A  YA+   +A +++   + +E D R+ +  +K  + 
Sbjct: 381 RVADVQTVIIPVGITAKTTDKERASLYAEIDALAAVIEDAGVRVEVDKRDNSPGWKFNDW 440

Query: 599 SIKKIPIIIICGDKEASERSIGIRRF---GSTTTQKVSLLDA---IPILTKESLPPDCQK 652
            ++ IP+ +  G  E++   +   R    G      + + +    +P L  E++  D  K
Sbjct: 441 ELRGIPLRLEFGPGESTGHFVTTSRRDIPGKDGKSTIPISELKTQVPALL-ETIQADLYK 499


>gi|330807862|ref|YP_004352324.1| proline--tRNA ligase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327375970|gb|AEA67320.1| Proline--tRNA ligase (proline tRNA synthetase) [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 571

 Score =  157 bits (396), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 67/331 (20%), Positives = 119/331 (35%), Gaps = 21/331 (6%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L        ++    H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLATQKETPSDAVVISHQLMLRAGMIRKLA---SGLYTWLPMGLRVMRKVEAIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P      LWQ+SG W+ Y   +  +K      +  R F   P +    
Sbjct: 60  EMDAAGSLEVLMPGTQPAELWQESGRWEEYGPELLRIKD-----RHGRDFCAGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+ L +  + +R+E      GLMR R F   D++ F          
Sbjct: 115 TDLMRNELSSYKQLPINLYQIQTKFRDEIRPRF-GLMRGREFIMKDSYSFHADLASLQIT 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             ++H    +I+   G +   V+         GS      AE+    ++ +  +     I
Sbjct: 174 YDRMHQAYCNIFTRLGLKFRPVEADNGSIGGAGSHEFHVLAESGEDDIVFSNGSDYAANI 233

Query: 464 NTGVL-LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLP-SRFNAFYVNSHSEKCHPV 521
                   E +   P  E  L D          +   +NLP  R     +    E+    
Sbjct: 234 EKAEAVPRETSRAAPTEELRLVDT-PNAKTIAQLVEGYNLPIERTIKTLIVRAEEEGK-- 290

Query: 522 MIHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
           +I   V G  E     + E    N P   SP
Sbjct: 291 LIALIVRGDHE-----LNEIKAANQPGVASP 316



 Score = 80.2 bits (196), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 33/166 (19%), Positives = 60/166 (36%), Gaps = 12/166 (7%)

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKG 544
           I R  + G I    N  S+     V    E   PV +    +G  + R +   IE N   
Sbjct: 403 IKRGIEVGHIFQLGNKYSKAMKCEVL--GENGKPVTLEMGCYGIGVSRVVAAAIEQNNDE 460

Query: 545 NLPLW---LSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNET--INYKIR 596
              +W   L+P Q  +  +   T    E   ++   L +    +  D R++      K  
Sbjct: 461 KGIIWSDTLAPFQIALVPLRYETDLVREATDKLYAELTAAGFEVLLDDRDKKTSPGIKFA 520

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +  +  IP  I+  D+  +E ++  +       Q + + D +  L 
Sbjct: 521 DMELIGIPHRIVVSDRGLAEGNLEYKSRTEAEPQALPVADVLSFLQ 566


>gi|242043016|ref|XP_002459379.1| hypothetical protein SORBIDRAFT_02g003730 [Sorghum bicolor]
 gi|241922756|gb|EER95900.1| hypothetical protein SORBIDRAFT_02g003730 [Sorghum bicolor]
          Length = 530

 Score =  157 bits (396), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 63/411 (15%), Positives = 143/411 (34%), Gaps = 60/411 (14%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           +    +          +  +    +L         ++     G+ I++ +  Y+  K K+
Sbjct: 48  DREGQVTPRSADFNAWYTDVIAAAELADYGPVRGTMVI-RPYGYAIWEAIQDYLNVKFKE 106

Query: 290 -DYEEINTPQVLDQHL-WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
             +  +  PQ +      +++ H + +   +  V        + +   ++P +      +
Sbjct: 107 TGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEK-LVVRPTSETIVNHM 165

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLK 406
           F   + SYR+LP+ + ++ +V R E        +R   F   + H    T E+   E ++
Sbjct: 166 FTKWIHSYRDLPLMINQWANVTRWEMR--TKPFIRTLEFLWQEGHTAHATLEEAEKEAMQ 223

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           +      +Y  F                                  +           + 
Sbjct: 224 MI----DVYTKF--------------------------------AYEHAAIPVIPGRKSK 247

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
           V    GA      E ++ D   +  Q GT   +  N    F   +++ + +  H   + +
Sbjct: 248 VETFAGANRTYTIEAMMGD--KKALQAGTSHNLGQNFSRAFGTQFMDENGQIEH---VWQ 302

Query: 526 AVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTI------TSSAVEYAQEIANLL 575
             +    RF+G +I     +    LP  ++PIQ I+  I       S+ +E    +  +L
Sbjct: 303 TSWAISTRFVGGIIMTHGDDAGLMLPPRIAPIQVIIVPIWKKGDEKSAVLEAVDSVQKIL 362

Query: 576 KSHHLSIETDFRN-ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
           K   + ++ D     T  +K   + +K +P+ I  G ++ + +S+ + R  
Sbjct: 363 KEAGIRVKVDDSELRTPGWKFNHYEMKGVPVRIEIGPRDVTNKSVVVSRRD 413


>gi|10580016|gb|AAG18956.1| proline-tRNA synthetase [Halobacterium sp. NRC-1]
          Length = 465

 Score =  157 bits (396), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 57/374 (15%), Positives = 125/374 (33%), Gaps = 57/374 (15%)

Query: 270 RKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHLW--QQSGHWDSYRANMFAVKCADDT 327
            +G+ +++ +   +    KD   E     +     +  ++    + +   +  V      
Sbjct: 9   PRGYALWEAIQDNLDGWFKDTGVENAYFPMFIPEDYLEREKDIVEGFDPEVAWVTQGGHD 68

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
             D R  A++P +        +  ++S+R+LP+R+ ++ SV R E +       R + F 
Sbjct: 69  DLDQR-LAVRPTSESIIAPYLSQWVRSHRDLPLRVNQWNSVVRWEAT-ETKPFFRTKEFL 126

Query: 388 QDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
             + H    T E  + E     +    +Y+D     ++       +K  G+D        
Sbjct: 127 WQEGHTAHATDEAAWAETTLRLDQYHRLYEDVLGIPVLRGRKPDHDKFPGADT------- 179

Query: 447 IMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI-QVDFNLPSR 505
                                            E ++ D  G+  Q GT   +  +    
Sbjct: 180 -----------------------------TMSVEALMPD--GKSVQGGTSHHLGQSFADA 208

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI----QAIVTTI- 560
           F+  + +    +      +   +G   R IG ++ +   +  L L P     Q ++  I 
Sbjct: 209 FDITFADEDEAERTA---YTTSWGLSWRAIGALVMSHSDDQGLVLPPTVAPKQVVIVPIW 265

Query: 561 ----TSSAVEYAQEIANLLKSHHLSIETDFRNET-INYKIREHSIKKIPIIIICGDKEAS 615
                    +Y  EIA  L++  + +  D R+     +K  E  +  +P+    G  E  
Sbjct: 266 QEDTKDDVEQYGAEIAAELEAQGVRVHFDDRDGRNPGFKFNEWELNGVPVRFEIGPNEVE 325

Query: 616 ERSIGIRRFGSTTT 629
           +  + +       +
Sbjct: 326 DDEVTVVHRPDGES 339


>gi|302774721|ref|XP_002970777.1| hypothetical protein SELMODRAFT_94171 [Selaginella moellendorffii]
 gi|300161488|gb|EFJ28103.1| hypothetical protein SELMODRAFT_94171 [Selaginella moellendorffii]
          Length = 528

 Score =  157 bits (396), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 65/415 (15%), Positives = 157/415 (37%), Gaps = 60/415 (14%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
             ++ + + +    +   R +  +    +L         ++     G+ I++ + S++  
Sbjct: 43  PAKKPVDEAVTPRSQDFSRWYLDVIDAAELADYGPVRGTMVI-RPYGYAIWEFVQSWLDA 101

Query: 286 KIKD-DYEEINTPQVLDQHL-WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPG 343
           K K+  +  +  PQ++      +++ H + +   +  V        + +   ++P +   
Sbjct: 102 KFKETGHSNMYFPQLIPYSFIEKETSHVEGFSPELALVTIGGGKELEEK-LVVRPTSETM 160

Query: 344 HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFN 402
              +F   ++S+R+LP+ + ++ +V R E        +R   F   + H    T ++   
Sbjct: 161 VNHMFAQWIRSHRDLPLLVNQWANVTRWERR--TKPFIRTLEFLWQEGHTAHATAQEAEE 218

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
           E L++  +  +   +     ++V   +R E+  G+   +                     
Sbjct: 219 EALRMIEVYRTFAVEQAAMPVIVGRKSRLERFAGAICTY--------------------- 257

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPV 521
                            E ++ D   R  Q GT   +  N    F   + + + +  H  
Sbjct: 258 ---------------TIEAMMGDR--RALQAGTSHNLGQNFARAFETQFTDVNGDLQH-- 298

Query: 522 MIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTI------TSSAVEYAQEI 571
            I +  +G   R +G +I     +    LP  L+PIQ ++  I        + ++ A ++
Sbjct: 299 -IWQTSWGMSTRMVGGIIMTHGDDKGLMLPPKLAPIQVVIVPIWKKGDEQEAVLQAAHKV 357

Query: 572 ANLLKSHHLSIETD-FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
            +L+++  + ++ D F   T  +K     +K +PI I  G K+ +  S+ + R  
Sbjct: 358 ESLVRAAGIRVKLDTFDQRTPGWKFNHWELKGVPIRIEIGPKDVANNSVVVARRD 412


>gi|332292776|ref|YP_004431385.1| prolyl-tRNA synthetase [Krokinobacter diaphorus 4H-3-7-5]
 gi|332170862|gb|AEE20117.1| prolyl-tRNA synthetase [Krokinobacter diaphorus 4H-3-7-5]
          Length = 492

 Score =  157 bits (396), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 73/436 (16%), Positives = 162/436 (37%), Gaps = 73/436 (16%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
              E   + + +L  + DL   +     ++     G+ I++ + + + R  K+  +E   
Sbjct: 7   KRSEDYSKWYNELVVQADLAENSAVRGCMVI-KPYGYAIWEKMQAELDRMFKETGHENAY 65

Query: 296 TPQVLDQHLWQ-QSGHWDSYRANMFAVKCA--------------DDTIKDLRTFALKPMN 340
            P  + + L++ +  + + +      V                 D   K      ++P +
Sbjct: 66  FPLFVPKSLFEAEEKNAEGFAKECAVVTHYRLKTDPDNPSKLIVDPNAKLEEELIVRPTS 125

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQ 399
                  +   ++SYR+LP+ + ++ +V R E        +R   F   + H    TK++
Sbjct: 126 EAIIWNTYKGWIQSYRDLPLLINQWANVVRWEMR--TRLFLRTAEFLWQEGHTAHATKQE 183

Query: 400 MFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSS 459
              E   ++N+     ++F    ++  + T  E+  G+D  +                  
Sbjct: 184 ALVEAELMNNIYAEFAENFLAIPVVKGVKTESERFAGADETF------------------ 225

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKC 518
                               E +++D  G+  Q GT   +  N    F+  +  +  ++ 
Sbjct: 226 ------------------CIEALMQD--GKALQAGTSHFLGQNFAKAFDVKFTTNQGKQE 265

Query: 519 HPVMIHRAVFGSIERFIGIMIENFKGNL----PLWLSPIQAIVTTITSSAVEY------A 568
           H   +    +G   R +G +I     +     P  L+P Q ++  I     +       A
Sbjct: 266 H---VWATSWGVSTRLMGALIMTHSDDQGLVLPPNLAPFQVVIVPIYKGQEQLDAISQVA 322

Query: 569 QEIANLLKSHHLSIETDFRN-ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGST 627
            EI   LK H +S++ D R+     +K  E+ +K +P+ I  G K+  +R++ + R  + 
Sbjct: 323 NEIVQDLKLHGVSVKFDNRDTHKPGWKFNEYELKGVPLRIGIGPKDLEKRTVELARRDTL 382

Query: 628 TTQKVSLLDAIPILTK 643
           T + V+  + +  +  
Sbjct: 383 TKEFVAKENIVETVVD 398


>gi|224025842|ref|ZP_03644208.1| hypothetical protein BACCOPRO_02584 [Bacteroides coprophilus DSM
           18228]
 gi|224019078|gb|EEF77076.1| hypothetical protein BACCOPRO_02584 [Bacteroides coprophilus DSM
           18228]
          Length = 521

 Score =  157 bits (396), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 69/475 (14%), Positives = 170/475 (35%), Gaps = 77/475 (16%)

Query: 201 MKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAE 260
           M++ G      S   +  +        ++          E+  + +  L  + DL   + 
Sbjct: 1   MEIVGFCVFLQSQNKVYIKYNRIIVMAKELKDLTKR--SENYSQWYNDLVVKADLAEQSP 58

Query: 261 DGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH-LWQQSGHWDSYRANM 318
               ++     G+ I++ +   +    K   +     P ++ +  L +++ H + +    
Sbjct: 59  VRGCMVI-KPYGYAIWEKMQRILDDMFKATGHVNAYFPLLIPKSYLSREAEHVEGFAKEC 117

Query: 319 FAVKCA-------------DDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEF 365
             V                D   K      ++P +     + + + + SYR+LP+   ++
Sbjct: 118 AVVTHYRLKNAEDGSGVIVDPAAKLEEELIIRPTSETIIWSTYKNWINSYRDLPILCNQW 177

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
            +V R E        +R   F   + H    T+E+   E  K+ ++     + +    ++
Sbjct: 178 ANVMRWEMR--TRLFLRTAEFLWQEGHTAHATREEAETEAQKMLHVYGDFAEKYMAVPVI 235

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
             + +  E+  G                                    A      E +++
Sbjct: 236 KGVKSANERFAG------------------------------------ALDTYTIEGLMQ 259

Query: 485 DAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI---- 539
           D  G+  QCGT   +  N    FN  +V+ +++  +   +    +G   R +G +I    
Sbjct: 260 D--GKALQCGTSHFLGQNFAKAFNVQFVDKNNKLDY---VWATSWGVSTRLMGALIMTHS 314

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEY------AQEIANLLKSHHLSIETDF-RNETIN 592
           ++    LP  L+PIQ ++  I  +  +        + I   L+   +S++ D   N+   
Sbjct: 315 DDNGLVLPPHLAPIQVVIVPIYKNDEQLKQIDAKVEGIVAKLRELGISVKYDNADNKRPG 374

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS---LLDAIPILTKE 644
           +K  ++ +K +P+ ++ G ++    ++ I R  +   +  +   + + +  L ++
Sbjct: 375 FKFADYELKGVPVRLVMGGRDLENNTMEIMRRDTLEKETRTCEGIEEYVKNLLED 429


>gi|302818920|ref|XP_002991132.1| hypothetical protein SELMODRAFT_132981 [Selaginella moellendorffii]
 gi|300141063|gb|EFJ07778.1| hypothetical protein SELMODRAFT_132981 [Selaginella moellendorffii]
          Length = 528

 Score =  157 bits (396), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 66/415 (15%), Positives = 157/415 (37%), Gaps = 60/415 (14%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
             ++ + + +    +   R +  +    +L         ++     G+ I++ + S++  
Sbjct: 43  PAKKPVDEAVTPRSQDFSRWYLDVIDAAELADYGPVRGTMVI-RPYGYAIWEFVQSWLDA 101

Query: 286 KIKD-DYEEINTPQVLDQHL-WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPG 343
           K K+  +  +  PQ++      +++ H + +   +  V        + +   ++P +   
Sbjct: 102 KFKETGHSNMYFPQLIPYSFIEKETSHVEGFSPELALVTIGGGKELEEK-LVVRPTSETM 160

Query: 344 HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFN 402
              +F   ++S+R+LP+ + ++ +V R E        +R   F   + H    T ++   
Sbjct: 161 VNHMFAQWIRSHRDLPLLVNQWANVTRWERR--TKPFIRTLEFLWQEGHTAHATAQEAEE 218

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
           E L++  +  +   +     ++V   +R E+  G+   +                     
Sbjct: 219 EALRMIEVYRTFAVEQAAMPVIVGRKSRLERFAGATCTY--------------------- 257

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPV 521
                            E ++ D   R  Q GT   +  N    F   + + + +  H  
Sbjct: 258 ---------------TIEAMMGDR--RALQAGTSHNLGQNFARAFETQFTDVNGDLQH-- 298

Query: 522 MIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTI------TSSAVEYAQEI 571
            I +  +G   R +G +I     +    LP  L+PIQ ++  I        S ++ A ++
Sbjct: 299 -IWQTSWGMSTRMVGGIIMTHGDDKGLMLPPKLAPIQVVIVPIWKKGDEQESVLQAAHKV 357

Query: 572 ANLLKSHHLSIETD-FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
            +L+++  + ++ D F   T  +K     +K +PI I  G K+ +  S+ + R  
Sbjct: 358 ESLVRAAGIRVKLDTFDQRTPGWKFNHWELKGVPIRIEIGPKDVANNSVVVARRD 412


>gi|121533721|ref|ZP_01665548.1| prolyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
 gi|121307712|gb|EAX48627.1| prolyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
          Length = 567

 Score =  157 bits (396), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 59/286 (20%), Positives = 109/286 (38%), Gaps = 35/286 (12%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +            E+E   H+ + R   +    +   G+  +    W++ + + + +R 
Sbjct: 3   ASNLYAPTLRETPAEAEVISHQLMLRAGMIR---KAAGGIYTYLPLAWRVLKKIETIIRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +E+  P V    +W+++G WD Y   MF +K      +  R F L P +    
Sbjct: 60  EMDAKGGQELLMPIVQPAEIWKKTGRWDVYGDEMFRLKD-----RHQRDFCLGPTHEEMI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    ++SYR+LP+ L +  + YR+E      GLMR R F   D + F   E+  NE 
Sbjct: 115 TTLVRDEVRSYRQLPLLLYQIQNKYRDEIRPRF-GLMRGREFIMKDLYSFDRDEEGLNES 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE----------------NI 447
             K+++    ++   G     V+  +      GS      AE                N+
Sbjct: 174 YNKMYDAYTRVFTRCGLTFRPVEADSGAIGGSGSHEFMVLAESGEAAIVYCTTCDYAANV 233

Query: 448 MKGVLDTIKNSSQDRINTGVLLGEG--------AFYGPKFEYILKD 485
            K  L  I    ++++   ++   G        AF G   E  +K 
Sbjct: 234 EKAELKPIHAMEEEQLALEIVETPGRKTIGDVTAFLGISPEKTVKT 279



 Score = 91.4 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 26/159 (16%), Positives = 56/159 (35%), Gaps = 8/159 (5%)

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
            P+    +K A G +   G +   +   S          + +  P+++     G      
Sbjct: 391 CPRCGAPVKTARGIE--VGQVFKLYTKYSNALGATYLDENGQERPIVMGCYGIGVTRTMA 448

Query: 536 GIMIENFKGNLPLWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNE 589
             + +N   N  +W    +P   +V  +     + +  A+E+   L    +    D RNE
Sbjct: 449 AAIEQNHDENGIIWPVPIAPFHVVVIPVNAKEEAQMSLAEEVYTELNKAGVEAILDDRNE 508

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
               K ++  +   P+ +  G K  SE  + ++   +  
Sbjct: 509 RPGVKFKDADLIGYPLRVTIGPKALSEGRVEVKVRRTGE 547


>gi|86132750|ref|ZP_01051342.1| Prolyl-tRNA synthetase [Dokdonia donghaensis MED134]
 gi|85816704|gb|EAQ37890.1| Prolyl-tRNA synthetase [Dokdonia donghaensis MED134]
          Length = 492

 Score =  157 bits (396), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 77/440 (17%), Positives = 168/440 (38%), Gaps = 76/440 (17%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
              E   + + +L  + DL   +     ++     G+ I++ + + + R  K+  +E   
Sbjct: 7   KRSEDYSKWYNELVVQADLAENSAVRGCMVI-KPYGYAIWEKMQAELDRMFKETGHENAY 65

Query: 296 TPQVLDQHLWQ-QSGHWDSYRANMFAVKCA--------------DDTIKDLRTFALKPMN 340
            P  + + L++ +  + + +      V                 D   K      ++P +
Sbjct: 66  FPLFVPKSLFEAEEKNAEGFAKECAVVTHYRLKTDPEDSSKLIVDPNAKLEEELIVRPTS 125

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQ 399
                  +   ++SYR+LP+ + ++ +V R E        +R   F   + H    TKE+
Sbjct: 126 EAIIWNTYKGWIQSYRDLPLLINQWANVVRWEMR--TRLFLRTAEFLWQEGHTAHATKEE 183

Query: 400 MFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSS 459
              E   ++N+     ++F    ++  + T  E+  G+D  +                  
Sbjct: 184 ALEEAELMNNVYAEFAENFLAVPVIKGVKTESERFAGADETY------------------ 225

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKC 518
                               E +++D  G+  Q GT   +  N    F+  + ++  ++ 
Sbjct: 226 ------------------CIEALMQD--GKALQAGTSHFLGQNFAKAFDVKFTSNQGKQE 265

Query: 519 HPVMIHRAVFGSIERFIGIMIENFKGNL----PLWLSPIQAIVTTIT------SSAVEYA 568
           H   +    +G   R +G +I     +     P  L+P Q ++  I        +  + A
Sbjct: 266 H---VWATSWGVSTRLMGALIMTHSDDQGLVLPPNLAPFQVVIVPIYKNQEQLDAISQVA 322

Query: 569 QEIANLLKSHHLSIETDFRN-ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGST 627
            E+   LK H +S++ D R+     +K  E+ +K +P+ I  G K+  +R++ + R  + 
Sbjct: 323 NELVQDLKLHGVSVKFDNRDTHKPGWKFNEYELKGVPLRIGIGPKDLEKRTVELARRDTL 382

Query: 628 TTQKV---SLLDAIPILTKE 644
           T + V   +++D +  L KE
Sbjct: 383 TKEFVAKETVVDTVITLLKE 402


>gi|90020556|ref|YP_526383.1| Pectate lyase/Amb allergen [Saccharophagus degradans 2-40]
 gi|114152247|sp|Q21MA8|SYP_SACD2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|89950156|gb|ABD80171.1| prolyl-tRNA synthetase [Saccharophagus degradans 2-40]
          Length = 575

 Score =  157 bits (396), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 50/249 (20%), Positives = 98/249 (39%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  +  Y     ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   ASKYLIATYKETPADAEVISHQLMLRAGLIRKLA---SGLYNWLPAGLRVLRKVETIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +E+  P V    LW++SG W  Y   +  +    D     R F L P +    
Sbjct: 60  EMDRAGAQEVLMPVVQPAELWEESGRWQQYGPELLRINDRHD-----RAFCLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + LKSY++LP    +  + +R+E      G+MR R F   DA+ F   ++   E 
Sbjct: 115 TDLIRNELKSYKQLPANFYQIQTKFRDEVRPRF-GVMRAREFLMKDAYSFHASQECLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +H     I+   G +   V   T      GS      A++    +  + +++    +
Sbjct: 174 YDIMHAAYCKIFDRIGLDYRPVLADTGSIGGTGSHEFHVLADSGEDDIAFSTESNFAANV 233

Query: 464 NTGVLLGEG 472
                L   
Sbjct: 234 ELAEALAPA 242



 Score = 78.7 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 61/167 (36%), Gaps = 12/167 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKG 544
           I R  + G I Q+         A  ++ + +    +M    +   + R +   IE N+  
Sbjct: 405 IKRGIEVGHIFQLGTKYSEAMKASVLDENGKDKTMIMGCYGI--GVSRIVASAIEQNYDD 462

Query: 545 NLPLWL---SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIET-DFRNETINYKIR 596
           N  +W    +P    +  I    + +  +  +E+   L      +   D     +   + 
Sbjct: 463 NGIIWPDAIAPFHVAIVPINMQKSEAVAQKCEELYAQLNQLGYDVLLMDEPKARLGGMLA 522

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  +  IP  I+ GD+   +  +  +    + +Q +++ D I  +  
Sbjct: 523 DTELMGIPHRIVVGDRGLEKGQLEYKCRRDSDSQDIAVDDIIEFINN 569


>gi|315223470|ref|ZP_07865327.1| proline--tRNA ligase [Capnocytophaga ochracea F0287]
 gi|314946643|gb|EFS98634.1| proline--tRNA ligase [Capnocytophaga ochracea F0287]
          Length = 492

 Score =  157 bits (396), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 72/442 (16%), Positives = 169/442 (38%), Gaps = 73/442 (16%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
           +++ L    E   + + +L  + DL   +     ++     G+ I++ + + + R  K+ 
Sbjct: 1   MSKNLTSRSEDYSKWYNELVIKADLAESSGVRGCMVI-KPYGYAIWEKMQAELDRMFKET 59

Query: 290 DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCA--------------DDTIKDLRTF 334
            +     P  + +  ++ +  + + +      V                 D   K     
Sbjct: 60  GHTNAYFPLFVPKSYFEAEEKNAEGFAKECAVVTHYRLKADPNEKGKLMVDPEAKLEEEL 119

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV- 393
            ++P +       + + ++SYR+LP+ + ++ +V R E        +R   F   + H  
Sbjct: 120 IVRPTSEAIIWNTYKNWIQSYRDLPILINQWANVVRWEMR--TRLFLRTAEFLWQEGHTA 177

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
             TKE+   E  K+ N+     ++F    ++  + +  E+  G+D  +            
Sbjct: 178 HATKEEAIEEAQKMMNVYADFVENFMAVPVIKGVKSESERFAGADDTY------------ 225

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVN 512
                                     E +++D  G+  Q GT   +  N    F+  YV+
Sbjct: 226 ------------------------CIEALMQD--GKALQAGTSHFLGQNFAKAFDVKYVS 259

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTIT------S 562
              ++ +   +  + +G   R +G +I    ++    LP  L+PIQ ++  I        
Sbjct: 260 KEGKQEY---VWASSWGVSTRLMGALIMTHSDDNGLVLPPKLAPIQVVIVPIYKGAEQLE 316

Query: 563 SAVEYAQEIANLLKSHHLSIETDFRN-ETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
               + Q +   LK H++S++ D R+ ++  +K  E+ +K IP+ +  G ++    +  +
Sbjct: 317 KVHSHIQPLIEELKKHNISVKFDDRDTQSPGFKFHEYELKGIPVRLAVGQRDIEHNTFEV 376

Query: 622 RRFGSTTTQKVSLLDAIPILTK 643
            R  + T + V+    +  + +
Sbjct: 377 ARRDTLTKETVAGGQIVAHIQQ 398


>gi|161349985|ref|NP_279476.2| prolyl-tRNA synthetase [Halobacterium sp. NRC-1]
 gi|169235366|ref|YP_001688566.1| prolyl-tRNA synthetase [Halobacterium salinarum R1]
 gi|114152200|sp|Q9HS52|SYP_HALSA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|259511601|sp|B0R3A3|SYP_HALS3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|167726432|emb|CAP13217.1| proline--tRNA ligase [Halobacterium salinarum R1]
          Length = 501

 Score =  157 bits (396), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 57/374 (15%), Positives = 125/374 (33%), Gaps = 57/374 (15%)

Query: 270 RKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHLW--QQSGHWDSYRANMFAVKCADDT 327
            +G+ +++ +   +    KD   E     +     +  ++    + +   +  V      
Sbjct: 45  PRGYALWEAIQDNLDGWFKDTGVENAYFPMFIPEDYLEREKDIVEGFDPEVAWVTQGGHD 104

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
             D R  A++P +        +  ++S+R+LP+R+ ++ SV R E +       R + F 
Sbjct: 105 DLDQR-LAVRPTSESIIAPYLSQWVRSHRDLPLRVNQWNSVVRWEAT-ETKPFFRTKEFL 162

Query: 388 QDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
             + H    T E  + E     +    +Y+D     ++       +K  G+D        
Sbjct: 163 WQEGHTAHATDEAAWAETTLRLDQYHRLYEDVLGIPVLRGRKPDHDKFPGADT------- 215

Query: 447 IMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI-QVDFNLPSR 505
                                            E ++ D  G+  Q GT   +  +    
Sbjct: 216 -----------------------------TMSVEALMPD--GKSVQGGTSHHLGQSFADA 244

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI----QAIVTTI- 560
           F+  + +    +      +   +G   R IG ++ +   +  L L P     Q ++  I 
Sbjct: 245 FDITFADEDEAERTA---YTTSWGLSWRAIGALVMSHSDDQGLVLPPTVAPKQVVIVPIW 301

Query: 561 ----TSSAVEYAQEIANLLKSHHLSIETDFRNET-INYKIREHSIKKIPIIIICGDKEAS 615
                    +Y  EIA  L++  + +  D R+     +K  E  +  +P+    G  E  
Sbjct: 302 QEDTKDDVEQYGAEIAAELEAQGVRVHFDDRDGRNPGFKFNEWELNGVPVRFEIGPNEVE 361

Query: 616 ERSIGIRRFGSTTT 629
           +  + +       +
Sbjct: 362 DDEVTVVHRPDGES 375


>gi|330936741|gb|EGH40917.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. pisi str. 1704B]
          Length = 548

 Score =  157 bits (396), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 46/217 (21%), Positives = 86/217 (39%), Gaps = 8/217 (3%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
            I +  SG+  W   G ++ + + + +R ++      EI  P +    LWQ+SG W+ Y 
Sbjct: 8   MIRKLASGLYTWLPMGLRVLRKVEAIVREEMDAAGALEILMPGIQPAELWQESGRWEQYG 67

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
             +  +       +  R F L P +      +  + L SY++LP+ L +  + +R+E   
Sbjct: 68  PELMRLVD-----RHNREFCLGPTHEEVITDLARNELNSYKQLPINLYQIQTKFRDEIRP 122

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              GLMR R F   DA+ F    +       ++H    +I+   G +   V+        
Sbjct: 123 RF-GLMRGREFVMKDAYSFHADHESLQVTYDRMHLAYSNIFTRLGLKFRPVEADNGSIGG 181

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
            GS      AE+    ++ +  +     I     +  
Sbjct: 182 AGSHEFHVLAESGEDDIVFSDGSDYAANIEKAEAIPR 218



 Score = 79.4 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 64/167 (38%), Gaps = 14/167 (8%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           I R  + G I Q+            +  + +   PV +    +G  + R +   IE N  
Sbjct: 380 IKRGIEVGHIFQLGTKYSEAMKCQVLGENGK---PVNLAMGCYGIGVSRVVAAAIEQNSD 436

Query: 544 GNLPLW---LSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNET--INYKI 595
            N  +W   L+P Q  +  +   T +  E   ++   L +    +  D R++      K 
Sbjct: 437 ENGIIWNDTLAPFQIALVPLRYETDAVREATDKLYADLTAAGFEVLLDDRDKKTSPGIKF 496

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +  +  IP  I+  D+  +E ++  +    +  Q +++ D +  + 
Sbjct: 497 ADMELIGIPHRIVVSDRGLAEGNLEYKSRTESQPQAIAVADVLSFIQ 543


>gi|300113463|ref|YP_003760038.1| prolyl-tRNA synthetase [Nitrosococcus watsonii C-113]
 gi|299539400|gb|ADJ27717.1| prolyl-tRNA synthetase [Nitrosococcus watsonii C-113]
          Length = 574

 Score =  157 bits (396), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 54/281 (19%), Positives = 105/281 (37%), Gaps = 13/281 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  LT       ++E   H+ + R   +  +A    G+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLTTTRETPADAEIISHQLMLRGSFIRRLAA---GLYTWLPLGLRVLRKVENIIRE 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +E+  P V    LW+++G W+ Y + +        T +  R F   P +    
Sbjct: 60  EMDKAGAQEVLMPAVQPAELWRETGRWEQYGSELLRF-----TDRHQRFFCFGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    ++SY++LP    +    +R+E      G+MR R F   DA+ F T +    + 
Sbjct: 115 TDLIRREIQSYKQLPANFYQIQLKFRDEIRPRF-GVMRSREFLMKDAYSFHTDQTSLGQT 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             +++     I+   G     V+  T       S      A +    +  + K++    +
Sbjct: 174 YHQMYETYSCIFDRIGLTFRAVQADTGMIGGKTSHEFHVLATSGEDAIAFSDKSAYAANV 233

Query: 464 NTGV-LLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLP 503
              V L        PK    L +  G       I    N+P
Sbjct: 234 ELAVALPPTDKPATPKETLSLIETPG-QCTIREISQFLNIP 273



 Score = 80.6 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 28/174 (16%), Positives = 62/174 (35%), Gaps = 13/174 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGN 545
           R  + G I Q+        NA  ++        + +    +G  + R +   IE N   +
Sbjct: 404 RGIEVGHIFQLGKKYSQAMNATVLDEAG---RAINLAMGCYGIGVSRVVAAAIEQNHDEH 460

Query: 546 LPLWLSPI---QAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
             +W +PI   Q  +  I    +    E + ++   L++    +  D R         + 
Sbjct: 461 GIIWPAPIAPFQLALVPINAHKSVRVKEMSDQLYTELQAAGFEVLLDDRQLRPGVIFADM 520

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
            +  IP  ++  ++     ++  +R     T  + L + I  L  +   P  ++
Sbjct: 521 DLIGIPHRLVISERGLENSTVEYKRRQDGKTCVIQLDNFISGLKDQLKTPIPRR 574


>gi|160882791|ref|ZP_02063794.1| hypothetical protein BACOVA_00752 [Bacteroides ovatus ATCC 8483]
 gi|156111815|gb|EDO13560.1| hypothetical protein BACOVA_00752 [Bacteroides ovatus ATCC 8483]
          Length = 497

 Score =  156 bits (395), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 65/438 (14%), Positives = 157/438 (35%), Gaps = 73/438 (16%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
              E+  + +  L  + DL   +     ++     G+ I++ +   +    K+  +    
Sbjct: 10  KRSENYSQWYNDLVVKADLAEQSAVRGCMVI-KPYGYAIWEKMQRQLDDMFKETGHVNAY 68

Query: 296 TPQVLDQHLW-QQSGHWDSYRANMFAVKCA-------------DDTIKDLRTFALKPMNC 341
            P ++ +    +++ H + +      V                D   K      ++P + 
Sbjct: 69  FPLLIPKSFLSREAEHVEGFAKECAVVTHYRLKNAEDGSGVVVDPAAKLEEELIIRPTSE 128

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
                 + + ++SYR+LP+   ++ +V+R E        +R   F   + H   T     
Sbjct: 129 TIIWNTYKNWIQSYRDLPILCNQWANVFRWEMR--TRLFLRTAEFLWQEGH---TAHATR 183

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E  +    ++++Y +F                                    +      
Sbjct: 184 EEAEEEAIRMLNVYGEF--------------------------------AEKYMAVPVVK 211

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHP 520
            + +      GA      E +++D  G+  Q GT   +  N    F+  +VN  ++  + 
Sbjct: 212 GVKSANERFAGALDTYTIEAMMQD--GKALQSGTSHFLGQNFAKAFDVQFVNKENKLEY- 268

Query: 521 VMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVEY------AQE 570
             +    +G   R +G +I    ++    LP  L+PIQ ++  I  +  +        + 
Sbjct: 269 --VWATSWGVSTRLMGALIMTHSDDNGLVLPPHLAPIQVVIVPIYKNDEQLKQIDAKVEG 326

Query: 571 IANLLKSHHLSIETDF-RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           I   LK+  +S++ D   N+   +K  ++ +K +P+ ++ G ++    ++ + R  +   
Sbjct: 327 IVAKLKALGISVKYDNADNKRPGFKFADYELKGVPVRLVMGGRDLENNTMEVMRRDTLEK 386

Query: 630 QKVS---LLDAIPILTKE 644
           + V+   +   +  L +E
Sbjct: 387 ETVTCEGIETYVQNLLEE 404


>gi|153806270|ref|ZP_01958938.1| hypothetical protein BACCAC_00526 [Bacteroides caccae ATCC 43185]
 gi|149130947|gb|EDM22153.1| hypothetical protein BACCAC_00526 [Bacteroides caccae ATCC 43185]
          Length = 497

 Score =  156 bits (395), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 65/438 (14%), Positives = 157/438 (35%), Gaps = 73/438 (16%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
              E+  + +  L  + DL   +     ++     G+ I++ +   +    K+  +    
Sbjct: 10  KRSENYSQWYNDLVVKADLAEQSAVRGCMVI-KPYGYAIWEKMQRQLDDMFKETGHVNAY 68

Query: 296 TPQVLDQHLW-QQSGHWDSYRANMFAVKCA-------------DDTIKDLRTFALKPMNC 341
            P ++ +    +++ H + +      V                D   K      ++P + 
Sbjct: 69  FPLLIPKSFLSREAEHVEGFAKECAVVTHYRLKNAEDGSGVVVDPAAKLEEELIIRPTSE 128

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
                 + + ++SYR+LP+   ++ +V+R E        +R   F   + H   T     
Sbjct: 129 TIIWNTYKNWIQSYRDLPILCNQWANVFRWEMR--TRLFLRTAEFLWQEGH---TAHATR 183

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E  +    ++++Y +F                                    +      
Sbjct: 184 EEAEEEAVRMLNVYGEF--------------------------------AEKYMAVPVVK 211

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHP 520
            + +      GA      E +++D  G+  Q GT   +  N    F+  +VN  ++  + 
Sbjct: 212 GVKSANERFAGALDTYTIEAMMQD--GKALQSGTSHFLGQNFAKAFDVQFVNKENKLEY- 268

Query: 521 VMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVEYAQE------ 570
             +    +G   R +G +I    ++    LP  L+PIQ ++  I  +  +  Q       
Sbjct: 269 --VWATSWGVSTRLMGALIMTHSDDNGLVLPPHLAPIQVVIIPIYKNDEQLKQIDAKVAG 326

Query: 571 IANLLKSHHLSIETDF-RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           I   LK+  +S++ D   N+   +K  ++ +K +P+ ++ G ++    ++ + R  +   
Sbjct: 327 IVTKLKALGISVKYDNADNKRPGFKFADYELKGVPVRLVMGGRDLENNTMEVMRRDTLEK 386

Query: 630 QKVS---LLDAIPILTKE 644
           + ++   +   +  L +E
Sbjct: 387 ETITCEGIEAYVQNLLEE 404


>gi|198275270|ref|ZP_03207801.1| hypothetical protein BACPLE_01429 [Bacteroides plebeius DSM 17135]
 gi|198271853|gb|EDY96123.1| hypothetical protein BACPLE_01429 [Bacteroides plebeius DSM 17135]
          Length = 496

 Score =  156 bits (395), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 70/438 (15%), Positives = 157/438 (35%), Gaps = 73/438 (16%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
              E+  + +  L  + DL   +     ++     G+ I++ +   +    K   +    
Sbjct: 10  KRSENYSQWYNDLVVKADLAEQSPVRGCMVI-KPYGYAIWEKMQRILDDMFKATGHVNAY 68

Query: 296 TPQVLDQH-LWQQSGHWDSYRANMFAVKCA-------------DDTIKDLRTFALKPMNC 341
            P ++ +  L +++ H + +      V                D   K      ++P + 
Sbjct: 69  FPLLIPKSYLSREAEHVEGFAKECAVVTHYRLKNAEDGSGVIVDPAAKLEEELIIRPTSE 128

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
               + + + + SYR+LP+   ++ +V R E        +R   F   + H   T     
Sbjct: 129 TIIWSTYKNWINSYRDLPILCNQWANVMRWEMR--TRLFLRTAEFLWQEGH---TAHATR 183

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E       ++ +Y DF                                    +      
Sbjct: 184 EEAEAEAQKMLHVYGDF--------------------------------AEKYMAVPVIK 211

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHP 520
            + +      GA      E +++D  G+  QCGT   +  N    FN  +V+ +++  + 
Sbjct: 212 GVKSANERFAGALDTYTIEGLMQD--GKALQCGTSHFLGQNFAKAFNVQFVDKNNKLDY- 268

Query: 521 VMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVEY------AQE 570
             +    +G   R +G +I    ++    LP  L+PIQ ++  I  +  +        + 
Sbjct: 269 --VWATSWGVSTRLMGALIMTHSDDNGLVLPPHLAPIQVVIVPIYKNDEQLKQIDAKVEG 326

Query: 571 IANLLKSHHLSIETDF-RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           I N L+S  +S++ D   N+   +K  ++ +K +P+ ++ G ++    ++ I R  +   
Sbjct: 327 IVNKLRSMGISVKYDNADNKRPGFKFADYELKGVPVRLVMGGRDLENNTMEIMRRDTLEK 386

Query: 630 QKVS---LLDAIPILTKE 644
           +  S   + + +  L +E
Sbjct: 387 ETRSCDGIEEYVQNLLEE 404


>gi|226945724|ref|YP_002800797.1| prolyl-tRNA synthetase [Azotobacter vinelandii DJ]
 gi|259511575|sp|C1DRG4|SYP_AZOVD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226720651|gb|ACO79822.1| prolyl-tRNA synthetase [Azotobacter vinelandii DJ]
          Length = 571

 Score =  156 bits (395), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 50/248 (20%), Positives = 97/248 (39%), Gaps = 11/248 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++    H+ + R   +  +A   SG+  W   G +  +   + +R 
Sbjct: 3   TSQYLLSTLKETPSDAVVISHQLMLRAGMIRKLA---SGLYTWLPLGLRALRKAEAIVRE 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P +    LWQ+SG W+ Y   +  ++      +  R F + P +    
Sbjct: 60  EMDKAGALEVLMPAIQPAELWQESGRWEQYGPELLRIRD-----RHAREFCVGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNE 403
             +  + L SY++LP+   +  + +R+E      GLMR R F   DA+ F  T+E +   
Sbjct: 115 TDLARNELNSYKQLPINFYQIQTKFRDEIRPRF-GLMRGREFLMKDAYSFHLTQESLQET 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             ++H    +I+   G E   V+  T      GS      A +    +  +  +     I
Sbjct: 174 YDRMHQAYCNIFSRLGLEFRPVQADTGSIGGTGSHEFHVLAASGEDDIAFSDSSDYAANI 233

Query: 464 NTGVLLGE 471
                +  
Sbjct: 234 EKAEAIPR 241



 Score = 81.8 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 31/176 (17%), Positives = 62/176 (35%), Gaps = 14/176 (7%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
           P  +      I R  + G I Q+        N   +  + +   PV +    +G  + R 
Sbjct: 393 PSPDGQGSLVIKRGIEVGHIFQLGTKYSEAMNCKVLGENGK---PVTLIMGCYGIGVSRV 449

Query: 535 IGIMIENFKGN----LPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFR 587
           +   IE          P  L+P Q  +  +   +++  E    +   L +    +  D R
Sbjct: 450 VAAAIEQNYDERGILWPQALAPFQIALVPMKYESAAVREATDRLYAELVAAGYEVLLDDR 509

Query: 588 NET--INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           ++      K  +  +  IP  I+  ++  +E ++  +    T  Q +   D I  L
Sbjct: 510 DKKTSPGVKFADMELIGIPHRIVVSERGLAEGTLEYKGRRETEVQAIPAADLITFL 565


>gi|67471890|ref|XP_651857.1| prolyl-tRNA synthetase [Entamoeba histolytica HM-1:IMSS]
 gi|56468636|gb|EAL46467.1| prolyl-tRNA synthetase, putative [Entamoeba histolytica HM-1:IMSS]
          Length = 536

 Score =  156 bits (395), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 75/399 (18%), Positives = 145/399 (36%), Gaps = 57/399 (14%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEI--NTPQVLDQHLWQQSGHWDSYRAN 317
            D SG        + I++ +  +M  +IK    E       V    L ++    + +   
Sbjct: 64  YDISGCYILKPSAYGIWENIQHFMDARIKKMGVENAYFPCFVSQATLKKEEDELNGFTPE 123

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           +  V  +  +       AL+P +       F + +  +R+LP+++ ++ +V R E S   
Sbjct: 124 VAWVTKSGQSDLQ-EPIALRPTSETIIYPAFKNWISGHRDLPIKVNQWCNVVRWEFS-HP 181

Query: 378 HGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
           +  +R R F   + H  F T+ +   EC +I  L  S+Y+D     ++    ++ E    
Sbjct: 182 YPFIRTREFLWQEGHTAFATQAEAEKECHEILELYASVYEDLLAVPVIRGKKSKGETF-- 239

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
                                              GA+Y    E I+    GR  Q GT 
Sbjct: 240 ----------------------------------PGAYYSLTVECIIPT-NGRSVQAGTS 264

Query: 497 QVDFNLPSR-FNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI-- 553
                  S+ F   + +  ++K    ++ +  +G   R IG+ I     N  + + P   
Sbjct: 265 HHLGQTFSKLFQIEFEDEDNKKQ---LVWQNSWGLSTRSIGVTIMTHGDNKGIIVPPRAA 321

Query: 554 --QAIVTTI------TSSAVEYAQEIANLLKSHHLSIETDFRN-ETINYKIREHSIKKIP 604
             Q ++ T+             A+E+  +L  + +    D        +K  E+ ++ IP
Sbjct: 322 QKQVVIITLHHKGSPNDEMDAKAEELTQVLIDNGIRAFADTNEMHKPGWKFSEYEMRGIP 381

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           I I  G ++   + + I R  +    + S  D I  + K
Sbjct: 382 IRIELGPRDYEGKKVVIVRRDNGAKSESSWEDLITNIKK 420


>gi|240282267|gb|EER45770.1| prolyl-tRNA synthetase [Ajellomyces capsulatus H143]
 gi|325088406|gb|EGC41716.1| prolyl-tRNA synthetase [Ajellomyces capsulatus H88]
          Length = 606

 Score =  156 bits (395), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 82/431 (19%), Positives = 161/431 (37%), Gaps = 69/431 (16%)

Query: 247 RKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHL- 304
           + L +   L +   D SG        + I++T+ ++   +IK    +  + P  + + + 
Sbjct: 109 QVLLKGQMLDY--YDVSGCFILKPHSYFIWETIQNWFNDRIKKMGVKNCSFPLFVSEDVL 166

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
            ++  H + + A +  V  A ++ K  R  A++P +       +   ++S+R+LP+RL +
Sbjct: 167 KKEKDHIEGFAAEVAWVTHAGNS-KLERKIAIRPTSETVMYPYYAKWIRSHRDLPLRLNQ 225

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN-ECLKIHNLIISIYKDFGFEKI 423
           + SV R E        +R R F   + H     E   + E L+I      +Y++     +
Sbjct: 226 WNSVVRWEFKNP-QPFLRTREFLWQEGHTAHLTEGGAHEEVLQILEHYAHVYEELLAIPV 284

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +    T  EK  G                                      Y    E  +
Sbjct: 285 IRGQKTEKEKFAGG------------------------------------LYTTTVEGYI 308

Query: 484 KDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSH---SEKCHPVMIHRAVFGSIERFIGIMI 539
             A GR  Q GT   +  N    F+    +      EK   + + +  +G   R IGIM+
Sbjct: 309 P-ATGRGIQGGTSHGLGQNFSKMFSITVEDPSAKPDEKKPALHVWQNSWGLSTRTIGIMV 367

Query: 540 ENFKGNLPLWLSP----IQAIVTTITSSA----VEYA------QEIANLLKSHHLSIETD 585
                +  L + P    IQ ++  + + A     E A        +A +L++  + +E D
Sbjct: 368 MVHGDDRGLVIPPRVADIQTVIVPVGTGAKTTDAEKASLMAEIDALAAVLEAAGVRVEVD 427

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRF---GSTTTQKVSLLDA---IP 639
            R+ T  +K  +  +  +P+ +  G  E++   +   R    G      + + +    +P
Sbjct: 428 KRDYTPGWKFNDWELHGVPLRLEFGPGESAGHYVTASRRDILGKDGKSTIPITELAAQVP 487

Query: 640 ILTKESLPPDC 650
            L  E++  D 
Sbjct: 488 ALL-ETIQADL 497


>gi|291223150|ref|XP_002731575.1| PREDICTED: GH23578-like [Saccoglossus kowalevskii]
          Length = 1716

 Score =  156 bits (395), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 69/435 (15%), Positives = 144/435 (33%), Gaps = 60/435 (13%)

Query: 227  TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
             +Q          E+    + ++  + ++     D SG        + I++ +  +   K
Sbjct: 1211 KKQTRLGLEAKKNENLAEWYSQIITKSEMIEY-YDVSGCYILRPWAYSIWEVIKDFFDTK 1269

Query: 287  IKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
            IK+   E    P  +     + +  H   +   +  V  +  +       A++P +    
Sbjct: 1270 IKELGVENCYFPMFVSHAALEREKTHIADFAPEVAWVTKSGSSDL-AEPIAVRPTSETVI 1328

Query: 345  VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNE 403
               +   ++S+R+LP++L ++ +V R E        +R R F   + H  +   E    E
Sbjct: 1329 YPAYAKWVQSHRDLPIKLNQWCNVVRWEFK-HPQPFLRTREFLWQEGHTAWANAEDAQEE 1387

Query: 404  CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             + I  L   +Y++     ++    T  EK  G D                         
Sbjct: 1388 VITILELYARVYEELLAIPVIRGRKTEKEKFAGGD------------------------- 1422

Query: 464  NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
                       Y    E     A GR  Q  T        S+         S+      +
Sbjct: 1423 -----------YTTTVE-AFISASGRAIQGATSHHLGQNFSKMFDITFEDPSQPSKHQFV 1470

Query: 524  HRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTT----------ITSSAVEYAQ 569
            ++  +G   R IG++      +  L L P    IQ ++              ++ ++  Q
Sbjct: 1471 YQNSWGLTTRTIGVLCMVHGDDQGLVLPPRVATIQIVIVPCGITVDMSDVDKNALLDKCQ 1530

Query: 570  EIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERS-IGIRRFGST 627
            E   L KS  +  + D+R+  +  +K     +K +P+ I  G ++  ++  + +R   + 
Sbjct: 1531 EYVKLFKSTGMKCKGDYRDNYSPGWKFNHWELKGVPLRIEVGPRDMKKKQFVAVR-RDTG 1589

Query: 628  TTQKVSLLDAIPILT 642
                     A   + 
Sbjct: 1590 EKTTYPEDGAAAKIR 1604


>gi|227540188|ref|ZP_03970237.1| proline--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300]
 gi|227240049|gb|EEI90064.1| proline--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300]
          Length = 490

 Score =  156 bits (395), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 67/425 (15%), Positives = 156/425 (36%), Gaps = 71/425 (16%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
             E   + +  L  + DL   +     ++     G+ I++ + + + +  KD  +     
Sbjct: 8   RAEDYSQWYNDLVIKADLAEYSAVRGCMVI-KPYGYAIWERMQAILDKMFKDTGHSNAYF 66

Query: 297 PQVLDQHLW-QQSGHWDSYRANMFAVKCA------------DDTIKDLRTFALKPMNCPG 343
           P  + +  + +++ H + +      V               D+  K      ++P +   
Sbjct: 67  PLFIPKSFFSKEASHVEGFATECAVVTHYRLKNDGAGNIIVDEDAKLEEELIVRPTSETI 126

Query: 344 HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFN 402
               +   ++SYR+LP+ + ++ +V R E        +R   F   + H    T ++   
Sbjct: 127 IWNTYRGWIESYRDLPILVNQWANVVRWEMR--TRLFLRTAEFLWQEGHTAHATSQEAIE 184

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
           E  K+  +     +++    ++    T  E+  G                          
Sbjct: 185 ETEKMLGVYAYFAENYLAVPVVRGRKTENERFAG-------------------------- 218

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPV 521
                     A      E +++D  G+  Q GT   +  N    F+  + +   ++ H  
Sbjct: 219 ----------ALDTYCIEALMQD--GKALQAGTSHFLGQNFAKAFDVKFTSKEGKQEH-- 264

Query: 522 MIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVE------YAQEI 571
            +  + +G   R +G +I    ++    LP  L+PIQ ++  I  +  E      +   +
Sbjct: 265 -VWASSWGVSTRLMGALIMAHSDDQGLVLPPMLAPIQVVIVPIYRTDEEKANIDVFVDGL 323

Query: 572 ANLLKSHHLSIETDFRN-ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
              LK+ ++S++ D R+ +   +K  E  +K +P+ +  G ++    ++ + R  + T +
Sbjct: 324 NAELKAKNISVKYDDRDTQRPGFKFAEWELKGVPLRVAVGARDMQNDTVELARRDTQTKE 383

Query: 631 KVSLL 635
            VS  
Sbjct: 384 TVSQE 388


>gi|212693169|ref|ZP_03301297.1| hypothetical protein BACDOR_02676 [Bacteroides dorei DSM 17855]
 gi|237709909|ref|ZP_04540390.1| prolyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA]
 gi|237725421|ref|ZP_04555902.1| prolyl-tRNA synthetase [Bacteroides sp. D4]
 gi|265753562|ref|ZP_06088917.1| prolyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
 gi|212664274|gb|EEB24846.1| hypothetical protein BACDOR_02676 [Bacteroides dorei DSM 17855]
 gi|229436108|gb|EEO46185.1| prolyl-tRNA synthetase [Bacteroides dorei 5_1_36/D4]
 gi|229456002|gb|EEO61723.1| prolyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA]
 gi|263235276|gb|EEZ20800.1| prolyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
          Length = 496

 Score =  156 bits (395), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 68/438 (15%), Positives = 156/438 (35%), Gaps = 73/438 (16%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
              E+  + +  L  + DL   +     ++     G+ I++ +   +    K+  +    
Sbjct: 10  KRSENYSQWYNDLVVKADLAEQSPVRGCMVI-KPYGYAIWEKMQRQLDDMFKETGHVNAY 68

Query: 296 TPQVLDQH-LWQQSGHWDSYRANMFAVKCA-------------DDTIKDLRTFALKPMNC 341
            P ++ +  L +++ H + +      V                D   K      ++P + 
Sbjct: 69  FPLLIPKSYLSREAEHVEGFAKECAVVTHYRLKNAEDGSGVIVDPAAKLEEELIIRPTSE 128

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
               + + + + SYR+LP+   ++ +V R E        +R   F   + H   T     
Sbjct: 129 TIIWSTYKNWINSYRDLPILCNQWANVMRWEMR--TRLFLRTAEFLWQEGH---TAHATR 183

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E       ++ +Y DF                                    +      
Sbjct: 184 EEAEAEAQKMLHVYGDF--------------------------------AEKYMAVPVIK 211

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHP 520
            + +      GA      E +++D  G+  QCGT   +  N    FN  +V+ +++  + 
Sbjct: 212 GVKSANERFAGALDTYTIEGLMQD--GKALQCGTSHFLGQNFAKAFNVQFVDKNNKLDY- 268

Query: 521 VMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITS------SAVEYAQE 570
             +    +G   R +G +I    ++    LP  L+PIQ ++  I              + 
Sbjct: 269 --VWATSWGVSTRLMGALIMTHSDDNGLVLPPHLAPIQVVIVPIYKNDEMLKKIDAKVEG 326

Query: 571 IANLLKSHHLSIETDF-RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           I N LK+  +S++ D   N+   +K  ++ +K +P+ ++ G ++    ++ + R  +   
Sbjct: 327 IVNKLKAMGISVKYDNADNKRPGFKFADYELKGVPVRLVMGGRDLENNTMEVMRRDTLEK 386

Query: 630 QKVS---LLDAIPILTKE 644
           +  S   + + +  L ++
Sbjct: 387 ETRSCDGIEEYVQQLLED 404


>gi|148377386|ref|YP_001256262.1| prolyl-tRNA synthetase [Mycoplasma agalactiae PG2]
 gi|148291432|emb|CAL58817.1| Prolyl tRNA synthetase (Proline tRNA ligase) [Mycoplasma agalactiae
           PG2]
          Length = 478

 Score =  156 bits (395), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 68/409 (16%), Positives = 150/409 (36%), Gaps = 58/409 (14%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD--YEEIN 295
           LE    + +  + ++ +L         +  +    + I++ +   +  +I      + + 
Sbjct: 10  LELDFAKWYTDVVKQGNLIEYGPVKGTL-IFKPNSYGIWEQIQKAL-NEIFRGLKVQNVY 67

Query: 296 TPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
            P  +   L  ++  H   +   +  +    D   D + + ++P +      +F   + S
Sbjct: 68  LPLFIPDRLLAKEKEHIAGFNPELATITKVGDKELDQKIY-VRPTSEVLFADLFKKMIVS 126

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           +++LP+   ++ +V R E   + +  +R R F   + H   T  +   E  K+   +I++
Sbjct: 127 HKDLPILYNQWANVVRWEK--TTNPFLRSREFLWQEGH---TCHKSAIEARKLTREMINV 181

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           Y  F                             +K  L  I      +       G  + 
Sbjct: 182 YAKF-----------------------------LKNYL-AIPTIIGKKTPYEKFAGACST 211

Query: 475 YGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           Y    E ++KD  G+  Q GT      N   RF   + N  +E      +++  +G   R
Sbjct: 212 YT--VEAMMKD--GKALQAGTSHYLAQNFSKRFEISFKNDKNEDE---FVYQTSWGVSTR 264

Query: 534 FIGIMIENFKGN----LPLWLSPIQAIVTTIT----SSAVEYAQEIANLLKSHHLSIETD 585
            +G +I     N    +P  ++P+Q  +  +         ++  E+A  L+     +  D
Sbjct: 265 LLGAIIMTHGDNRGIIIPPKVAPVQVDILELFANKQPKVHDFCNELAKQLERK-FRVRLD 323

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
             +++  YK     I+ +P+ I  G K+   +++ I R  +     VS+
Sbjct: 324 STDKSPGYKASNSEIQGVPLRIEVGPKDLENKTVTIVRRDTLEKTIVSV 372


>gi|147776717|emb|CAN76962.1| hypothetical protein VITISV_029502 [Vitis vinifera]
          Length = 599

 Score =  156 bits (395), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 69/403 (17%), Positives = 145/403 (35%), Gaps = 60/403 (14%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
             +     +  +    +L         ++     G+ I++ +  Y+  K K+  +  +  
Sbjct: 73  RSQDFNAWYLDVIANAELADYGPVRGTMVI-RPYGYAIWEAIQDYLNVKFKETGHSNMYF 131

Query: 297 PQVLDQHL-WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           PQ +      +++ H + +   +  V        + +   ++P +      +F   + SY
Sbjct: 132 PQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEK-LVVRPTSETIVNHMFTQWIHSY 190

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISI 414
           R+LP+ + ++ +V R E        +R   F   + H    T E+   E L++      +
Sbjct: 191 RDLPLMINQWANVTRWEMR--TKPFVRTLEFLWQEGHTAHATPEEAEKEALQMI----DV 244

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           Y  F                              +     +    + ++ T      GA 
Sbjct: 245 YTKF----------------------------AYEQAAIPVITGRKSKVETF----AGAX 272

Query: 475 YGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
                E ++ D   +  Q GT   +  N    F   + + + ++ H   I +  +    R
Sbjct: 273 RTYTIEAMMGDR--KALQAGTSHNLGQNFSRAFGTQFTDENGQRQH---IWQTSWAXSTR 327

Query: 534 FIGIMIENFKGN----LPLWLSPIQAIVTTITSSAVEY------AQEIANLLKSHHLSIE 583
           FIG +I     +    LP  ++PIQ ++  I   A E       A  +  +LKS ++ ++
Sbjct: 328 FIGGIIMTHGDDAGLMLPPKIAPIQVVIIPIWKKADEKTGVLNAASSVTEVLKSANIKVK 387

Query: 584 TDFRN-ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
            D  +  T  +K     +K +P+ I  G ++ S  S+ I R  
Sbjct: 388 VDDSDQRTPGWKFNFWEMKGVPLRIEIGPRDVSSGSVVISRRD 430


>gi|297191796|ref|ZP_06909194.1| prolyl-tRNA synthetase 2 [Streptomyces pristinaespiralis ATCC
           25486]
 gi|197721687|gb|EDY65595.1| prolyl-tRNA synthetase 2 [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 470

 Score =  156 bits (395), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 71/418 (16%), Positives = 149/418 (35%), Gaps = 58/418 (13%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
             E   R ++ L  + +L         ++     G+ +++ +   M  +IK    +    
Sbjct: 10  RSEDFPRWYQDLINKAELADNGPVRGTMVI-RPYGYGLWERMQQEMDARIKAAGAQNAYF 68

Query: 297 PQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P  + Q    +++ H + +   +  V        +     ++P +       F+  ++SY
Sbjct: 69  PLFIPQSYLTREAEHVEGFAPELAVVTHGGGKELE-EPVVVRPTSETIINDYFSKWVQSY 127

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHN--LII 412
           R+LP+ + ++ +V R E        +R   F   + H    T E   +   +IH      
Sbjct: 128 RDLPLLINQWANVVRWELRP--RVFLRTTEFLWQEGHTAHATYEDARDYAARIHRDVYAD 185

Query: 413 SIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
            +    G + ++ + + R                                         G
Sbjct: 186 FMVNVLGIDVVLGRKTPRERF-------------------------------------AG 208

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
           A      E ++ D  G+  Q GT   +  N    FN  Y++   ++    ++ +  +G  
Sbjct: 209 AINTLTLEGMMGD--GKALQMGTSHELGTNFAKAFNTSYLSKDGQQE---LVWQTSWGVS 263

Query: 532 ERFIGIMI----ENFKGNLPLWLSPIQAIVTTI-TSSAVEYAQEIANLLKSHHLSIETDF 586
            R +G +I    ++    +P  L+ +Q +V  I    AV    E+  LL +  L +  D 
Sbjct: 264 TRMVGGLIMSHGDDNGLRVPPRLAAVQVVVMAIKGDEAVAKVHEVGRLLTAAGLRVHVDD 323

Query: 587 RNETI-NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           R +T    +  +  +K +P+ I  G ++    +  + R      + VSL     +L K
Sbjct: 324 RVDTPFGRRAVDWELKGVPVRIEIGPRDLEAGTAMLARRIPGGKEPVSLDSLAALLPK 381


>gi|239614077|gb|EEQ91064.1| prolyl-tRNA synthetase [Ajellomyces dermatitidis ER-3]
 gi|327353430|gb|EGE82287.1| prolyl-tRNA synthetase [Ajellomyces dermatitidis ATCC 18188]
          Length = 607

 Score =  156 bits (394), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 84/433 (19%), Positives = 160/433 (36%), Gaps = 69/433 (15%)

Query: 247 RKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHL- 304
           + L +   L +   D SG        + I++T+  +   KIK    +  + P  + + + 
Sbjct: 110 QVLLKGQMLDY--YDVSGCFILKPHSYFIWETIQEWFNNKIKKMGVKNCSFPLFVSEDVL 167

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
            ++  H + + A +  V  A ++  + R  A++P +       +   ++S+R+LP+RL +
Sbjct: 168 KKEKDHIEGFAAEVAWVTHAGNSALE-RKIAIRPTSETVMYPYYAKWIRSHRDLPLRLNQ 226

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN-ECLKIHNLIISIYKDFGFEKI 423
           + SV R E        +R R F   + H     E     E L+I      +Y+D     +
Sbjct: 227 WNSVVRWEFKNP-QPFLRTREFLWQEGHTAHLTEAGAREEVLQILEHYAHVYEDLLAIPV 285

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +    T  EK  G                                      Y    E  +
Sbjct: 286 IRGQKTDKEKFAGG------------------------------------LYTTTVEGYI 309

Query: 484 KDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSH---SEKCHPVMIHRAVFGSIERFIGIMI 539
             A GR  Q GT   +  N    F     +      EK   + + +  +G   R IGIM+
Sbjct: 310 P-ATGRGIQGGTSHCLGQNFSKMFGITVEDPSAKPEEKKPALHVWQNSWGLSTRTIGIMV 368

Query: 540 ENFKGNLPLWLSP----IQAIVTTI-----TSSAVEYA-----QEIANLLKSHHLSIETD 585
                +  L + P    IQ ++  +     T+ A + A       +A +L++  + +E D
Sbjct: 369 MVHGDDRGLVIPPRVADIQTVIVPVGTGARTTEAEKTALMAEIDALAAVLQAVGVRVEVD 428

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRF---GSTTTQKVSLLDA---IP 639
            R+ T  +K  +  +  +P+ +  G  E++   +   R    G      + + +    +P
Sbjct: 429 KRDYTPGWKFNDWELHGVPLRLEFGPGESAGHYVTASRRDILGKDGKSTIPITELGVQVP 488

Query: 640 ILTKESLPPDCQK 652
            L  E++  D  K
Sbjct: 489 ALL-ETIQADLYK 500


>gi|255020885|ref|ZP_05292941.1| Prolyl-tRNA synthetase [Acidithiobacillus caldus ATCC 51756]
 gi|254969676|gb|EET27182.1| Prolyl-tRNA synthetase [Acidithiobacillus caldus ATCC 51756]
          Length = 572

 Score =  156 bits (394), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 52/246 (21%), Positives = 98/246 (39%), Gaps = 16/246 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E   H+ L R   +  +A   SG+  W   G ++ + +   +R ++     +EI    
Sbjct: 17  EAELVSHQLLLRGGFIRRLA---SGLYTWLPLGLRVLRRVEQVVREEMDRSGAQEILMTV 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    LWQ+SG W+ Y   +  +K      +  R F L P +      +    ++SYR+L
Sbjct: 74  VQPAELWQESGRWELYGPELLRLKD-----RHQRDFCLGPTHEEVISDLARREIRSYRQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKD 417
           PV L +  + +R+E      GLMR R F   DA+ F   +    E  + +++    +++ 
Sbjct: 129 PVNLYQIQTKFRDEIRPRF-GLMRAREFIMKDAYSFHMDQASLEEGYRAMYDAYCRVFQR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDALW---DDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            G +   V+  +       S       D  E+ +         ++ +   +       A 
Sbjct: 188 LGLDFRAVEADSGAIGGKRSHEFHVLADSGEDAIAFCRHCDYAANVELAESAENPEAAA- 246

Query: 475 YGPKFE 480
             P  +
Sbjct: 247 -TPAVD 251



 Score = 64.4 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 24/162 (14%), Positives = 57/162 (35%), Gaps = 11/162 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G + Q+      R     V     +   V++     G   R +   +E       
Sbjct: 409 RGIEVGHVFQLGTRYSERLG-VRVLDEGGREQTVLMGCYGIGVS-RIVAATVEQSHDERG 466

Query: 546 --LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
              P  L+P +  +  I    + + +  A E+ + L++  +    D R+E    +     
Sbjct: 467 IVWPEALAPFRVGIVAINGRKSPAVLSAALELHDRLEAAGIPTLLDDRDERPGVQFATLD 526

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           +  +P  ++  DK  ++  +  R    +  + ++      +L
Sbjct: 527 LIGLPHRVVVSDKLLAQGMLEYRARRDSDNRLLTPDALWELL 568


>gi|150005824|ref|YP_001300568.1| prolyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482]
 gi|254881996|ref|ZP_05254706.1| prolyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
 gi|294776476|ref|ZP_06741951.1| proline--tRNA ligase [Bacteroides vulgatus PC510]
 gi|319640997|ref|ZP_07995704.1| prolyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
 gi|166980101|sp|A6L5I2|SYP_BACV8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|149934248|gb|ABR40946.1| prolyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482]
 gi|254834789|gb|EET15098.1| prolyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
 gi|294449673|gb|EFG18198.1| proline--tRNA ligase [Bacteroides vulgatus PC510]
 gi|317387375|gb|EFV68247.1| prolyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
          Length = 496

 Score =  156 bits (394), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 68/438 (15%), Positives = 156/438 (35%), Gaps = 73/438 (16%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
              E+  + +  L  + DL   +     ++     G+ I++ +   +    K+  +    
Sbjct: 10  KRSENYSQWYNDLVVKADLAEQSPVRGCMVI-KPYGYAIWEKMQRQLDDMFKETGHVNAY 68

Query: 296 TPQVLDQH-LWQQSGHWDSYRANMFAVKCA-------------DDTIKDLRTFALKPMNC 341
            P ++ +  L +++ H + +      V                D   K      ++P + 
Sbjct: 69  FPLLIPKSYLSREAEHVEGFAKECAVVTHYRLKNAEDGSGVIVDPAAKLEEELIIRPTSE 128

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
               + + + + SYR+LP+   ++ +V R E        +R   F   + H   T     
Sbjct: 129 TIIWSTYKNWINSYRDLPILCNQWANVMRWEMR--TRLFLRTAEFLWQEGH---TAHATR 183

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E       ++ +Y DF                                    +      
Sbjct: 184 EEAEAEAQKMLHVYGDF--------------------------------AEKYMAVPVIK 211

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHP 520
            + +      GA      E +++D  G+  QCGT   +  N    FN  +V+ +++  + 
Sbjct: 212 GVKSANERFAGALDTYTIEGLMQD--GKALQCGTSHFLGQNFAKAFNVQFVDKNNKLDY- 268

Query: 521 VMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITS------SAVEYAQE 570
             +    +G   R +G +I    ++    LP  L+PIQ ++  I              + 
Sbjct: 269 --VWATSWGVSTRLMGALIMTHSDDNGLVLPPHLAPIQVVIVPIYKNDEMLKKIDAKVEG 326

Query: 571 IANLLKSHHLSIETDF-RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           I N LK+  +S++ D   N+   +K  ++ +K +P+ ++ G ++    ++ + R  +   
Sbjct: 327 IVNKLKAMGISVKYDNADNKRPGFKFADYELKGVPVRLVMGGRDLENNTMEVMRRDTLEK 386

Query: 630 QKVS---LLDAIPILTKE 644
           +  S   + + +  L ++
Sbjct: 387 ETRSCDGIEEYVQQLLED 404


>gi|253565674|ref|ZP_04843129.1| prolyl-tRNA synthetase [Bacteroides sp. 3_2_5]
 gi|251945953|gb|EES86360.1| prolyl-tRNA synthetase [Bacteroides sp. 3_2_5]
          Length = 497

 Score =  156 bits (394), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 65/438 (14%), Positives = 156/438 (35%), Gaps = 73/438 (16%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
              E+  + +  L  + DL   +     ++     G+ I++ +   +    K+  +    
Sbjct: 10  KRSENYSQWYNDLVVKADLAEQSAVRGCMVI-KPYGYAIWEKMQRQLDDMFKETGHVNAY 68

Query: 296 TPQVLDQHLW-QQSGHWDSYRANMFAVKCA-------------DDTIKDLRTFALKPMNC 341
            P ++ +    +++ H + +      V                D   K      ++P + 
Sbjct: 69  FPLLIPKSFLSREAEHVEGFAKECAVVTHYRLKNAEDGSGVVVDPAAKLEEELIIRPTSE 128

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
                 + + ++SYR+LP+   ++ +V+R E        +R   F   + H   T     
Sbjct: 129 TIIWNTYKNWIQSYRDLPILCNQWANVFRWEMR--TRLFLRTAEFLWQEGH---TAHATR 183

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E  +    ++++Y +F                                    +      
Sbjct: 184 EEAEEEAIRMLNVYAEF--------------------------------AEKYMAVPVVK 211

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHP 520
            + +      GA      E +++D  G+  Q GT   +  N    F+  +VN  ++  + 
Sbjct: 212 GVKSANERFAGALDTYTIEAMMQD--GKALQSGTSHFLGQNFAKAFDVQFVNKENKLEY- 268

Query: 521 VMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVEY------AQE 570
             +    +G   R +G +I    ++    LP  L+PIQ ++  I  +  +        + 
Sbjct: 269 --VWATSWGVSTRLMGALIMTHSDDNGLVLPPHLAPIQVVIVPIYKNDEQLKLIDAKVEG 326

Query: 571 IANLLKSHHLSIETDF-RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           I   LK   +S++ D   N+   +K  ++ +K +P+ ++ G ++    ++ + R  +   
Sbjct: 327 IVAKLKQLGISVKYDNADNKRPGFKFADYELKGVPVRLVMGGRDLENNTMEVMRRDTLEK 386

Query: 630 QKVS---LLDAIPILTKE 644
           + V+   +   +  L +E
Sbjct: 387 ETVTCDGIETYVQNLLEE 404


>gi|17547535|ref|NP_520937.1| prolyl-tRNA synthetase [Ralstonia solanacearum GMI1000]
 gi|81849506|sp|Q8XVL4|SYP_RALSO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|17429839|emb|CAD16523.1| probable prolyl-trna synthetase protein [Ralstonia solanacearum
           GMI1000]
          Length = 574

 Score =  156 bits (394), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 57/301 (18%), Positives = 113/301 (37%), Gaps = 13/301 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       ++E   H+ + R   +  +   G+G+  +   G ++ + +   +R 
Sbjct: 3   ASQFFISTLKEAPADAEIVSHKLMMRAGMIKKL---GAGLYTYMPVGLRVIRKVEQIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LWQ++G WD     M  VK      +  R   ++P +    
Sbjct: 60  EMNASGAVEVLMPVVQPAELWQETGRWDKMGDEMMRVKD-----RHERDLVIQPTSEEVV 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
             +    ++SY+++PV   +  + +R+E      G+MR R FT  DA+ F    E +   
Sbjct: 115 TDIARTEIRSYKQMPVNFYQIQTKFRDERRPRF-GIMRGREFTMKDAYSFDRDAEGLKVS 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             K++     I++ FG E   V          GS      A+     ++ +  +     I
Sbjct: 174 YEKMYGAYTRIFQRFGLEFRAVAADNGAIGGSGSHEFHVIADTGEDAIVYSPDSDYAANI 233

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI--QVDFNLPSRFNAFYVNSHSEKCHPV 521
                L      G   E + K    +  +C  +  Q+   L     +  +    E   P 
Sbjct: 234 EAAEALAPAMPRGAATEALTKTHTPKRAKCEAVAEQLGIALQRTVKSIVLAKDVEGGEPQ 293

Query: 522 M 522
           +
Sbjct: 294 I 294



 Score = 79.1 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 64/183 (34%), Gaps = 19/183 (10%)

Query: 462 RINTGVLLGEGAFYGPKFEY---ILKDAIGRDWQCGTIQVDFN------LPSRFNAFYVN 512
            +N G  L E   Y  +         D  G    C  I+V              +A +++
Sbjct: 374 GVNWGRDLPEAEVYDLRNVVEGDPSPDGKGTLAICRGIEVGHVFMLGTRYSESMSATFLD 433

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTI----TSSA 564
            +  K  P+M+     G I R +G  IE          P+ ++P + ++  +    + + 
Sbjct: 434 ENG-KTQPMMMGCYGIG-ITRILGAAIEQNYDARGIIWPVSIAPFEVVICPVGYDRSEAV 491

Query: 565 VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRF 624
              A  +   L +  + +  D R E       +  +  +P  ++ G++   +  + ++  
Sbjct: 492 RAEADRLHAELAAAGIDVILDDRGERPGAMFADWELIGVPFRVVVGERGLKDGKLELQGR 551

Query: 625 GST 627
              
Sbjct: 552 RDE 554


>gi|225464551|ref|XP_002272741.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 547

 Score =  156 bits (394), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 69/403 (17%), Positives = 145/403 (35%), Gaps = 60/403 (14%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
             +     +  +    +L         ++     G+ I++ +  Y+  K K+  +  +  
Sbjct: 73  RSQDFNAWYLDVIANAELADYGPVRGTMVI-RPYGYAIWEAIQDYLNVKFKETGHSNMYF 131

Query: 297 PQVLDQHL-WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           PQ +      +++ H + +   +  V        + +   ++P +      +F   + SY
Sbjct: 132 PQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEK-LVVRPTSETIVNHMFTQWIHSY 190

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISI 414
           R+LP+ + ++ +V R E        +R   F   + H    T E+   E L++      +
Sbjct: 191 RDLPLMINQWANVTRWEMR--TKPFVRTLEFLWQEGHTAHATPEEAEKEALQMI----DV 244

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           Y  F                              +     +    + ++ T      GA 
Sbjct: 245 YTKF----------------------------AYEQAAIPVITGRKSKVETF----AGAV 272

Query: 475 YGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
                E ++ D   +  Q GT   +  N    F   + + + ++ H   I +  +    R
Sbjct: 273 RTYTIEAMMGDR--KALQAGTSHNLGQNFSRAFGTQFTDENGQRQH---IWQTSWAVSTR 327

Query: 534 FIGIMIENFKGN----LPLWLSPIQAIVTTITSSAVEY------AQEIANLLKSHHLSIE 583
           FIG +I     +    LP  ++PIQ ++  I   A E       A  +  +LKS ++ ++
Sbjct: 328 FIGGIIMTHGDDAGLMLPPKIAPIQVVIIPIWKKADEKTGVLNAASSVTEVLKSANIKVK 387

Query: 584 TDFRN-ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
            D  +  T  +K     +K +P+ I  G ++ S  S+ I R  
Sbjct: 388 VDDSDQRTPGWKFNFWEMKGVPLRIEIGPRDVSSGSVVISRRD 430


>gi|255720300|ref|XP_002556430.1| KLTH0H13046p [Lachancea thermotolerans]
 gi|238942396|emb|CAR30568.1| KLTH0H13046p [Lachancea thermotolerans]
          Length = 675

 Score =  156 bits (394), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 78/407 (19%), Positives = 147/407 (36%), Gaps = 61/407 (14%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ-VLDQHLWQQSGHWDSYRAN 317
            D SG        + I++ +  +   KIK    +    P  V  + L ++  H + +   
Sbjct: 199 YDVSGCYILRPPSYAIWEQIQRWFDDKIKSIGVQNAYFPMFVSSRVLEKEKDHIEGFAPE 258

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           +  V  A  +  +    A++P +       +   ++SYR+LP++L ++ SV R E     
Sbjct: 259 VAWVTRAGSSELE-EPIAIRPTSETVMYPYYAKWVQSYRDLPLKLNQWNSVVRWEFKHP- 316

Query: 378 HGLMRVRGFTQDDAHVFCT-KEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
              +R R F   + H     +E+   E ++I +    +Y++     ++    T  EK  G
Sbjct: 317 QPFLRTREFLWQEGHTAHLGQEEAIEEVMQILDFYAGVYEELLAVPVVKGKKTEKEKFAG 376

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
            D                                    +    E  +    GR  Q  T 
Sbjct: 377 GD------------------------------------FTTTCEGYIP-QTGRGIQGATS 399

Query: 497 -QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI-- 553
             +  N    FN    N    +   V  H+  +G   R IG+M+     N  L + P   
Sbjct: 400 HHLGQNFSKMFNISVENPLGPEHPKVFAHQNSWGLSTRVIGVMVMIHSDNKGLVIPPRVS 459

Query: 554 --QAIVTTI------TSSA----VEYAQEIANLLKSHHLSIETDF-RNETINYKIREHSI 600
             Q +V  +      +        + A+EI   L++ ++    D+  N T  +K  ++ +
Sbjct: 460 QHQCVVLPVGINSKTSDEQRAVIHQKAREIEQKLRASNVRAFGDYNDNYTPGWKFSQYEL 519

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA---IPILTKE 644
           K IP+ +  G K+ ++  + + R        V   D    IP + +E
Sbjct: 520 KGIPLRLEFGPKDMAQDQVSVVRRNDNRKYTVKTADLETRIPEILEE 566


>gi|226494879|ref|NP_001149927.1| prolyl-tRNA synthetase [Zea mays]
 gi|195635525|gb|ACG37231.1| prolyl-tRNA synthetase [Zea mays]
          Length = 537

 Score =  156 bits (394), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 62/411 (15%), Positives = 143/411 (34%), Gaps = 60/411 (14%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           +    +          +  +    +L         ++     G+ I++ +  Y+  K K+
Sbjct: 55  DREGQVTPRSADFNAWYTDVIAAAELADYGPVRGTMVI-RPYGYAIWEAIQDYLNVKFKE 113

Query: 290 -DYEEINTPQVLDQHL-WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
             +  +  PQ +      +++ H + +   +  V        +     ++P +      +
Sbjct: 114 TGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELE-EXLVVRPTSETIVNHM 172

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLK 406
           F   ++SYR+LP+ + ++ +V R E        +R   F   + H    T E+   E ++
Sbjct: 173 FTKWIQSYRDLPLMINQWANVTRWEMR--TKPFIRTLEFLWQEGHTAHATLEEAEKEAMQ 230

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           + ++      +     ++    +R E   G                              
Sbjct: 231 MIDVYTKFAFEHAAIPVIPGRKSRVETFAG------------------------------ 260

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
                 A      E ++ D   +  Q GT   +  N    F   +++ + +  H   + +
Sbjct: 261 ------ANRTYTIEAMMGD--KKALQAGTSHNLGQNFSRAFGTQFMDENGQIEH---VWQ 309

Query: 526 AVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTITSS------AVEYAQEIANLL 575
             +    RF+G +I     +    LP  ++PIQ I+  I          VE    +  +L
Sbjct: 310 TSWAISTRFVGGIIMTHGDDAGLMLPPRIAPIQVIIVPIWKKGDEKAVVVEAVDSVQKIL 369

Query: 576 KSHHLSIETDFRN-ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
           K   + ++ D     T  +K   + +K +P+ I  G ++ + +S+ + R  
Sbjct: 370 KEAGIRVKVDDSELRTPGWKFNHYEMKGVPVRIEIGPRDVTNKSVVVSRRD 420


>gi|163846883|ref|YP_001634927.1| prolyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|222524704|ref|YP_002569175.1| prolyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
 gi|259511578|sp|A9W9Q2|SYP_CHLAA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|259511583|sp|B9LC55|SYP_CHLSY RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|163668172|gb|ABY34538.1| prolyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|222448583|gb|ACM52849.1| prolyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
          Length = 480

 Score =  156 bits (394), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 73/434 (16%), Positives = 147/434 (33%), Gaps = 61/434 (14%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
              + +        + +  + RE DL  +AE   G I     GW I++ +   +  +IK 
Sbjct: 1   MPKEVITQRSVDYNQWYLDIVREADLAEVAEVVRGCIVVKAHGWAIWELMQRALDDRIKA 60

Query: 290 -DYEEINTPQVLDQHL-WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
             +  +  P ++ +    +++ H + +   +  V  A         + ++P +       
Sbjct: 61  TGHANVQFPLLIPKSFIMKEAEHVEGFAPEVAEVTRAGGEEL-AEPYIIRPTSETIIGYF 119

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
           ++  ++SYR+LP+   ++ +V R E        +R   F   +               + 
Sbjct: 120 YSKWIRSYRDLPLLYNQWANVMRWEMR--TRPFLRTAEFWWQEG--HTAHATEAEAEEET 175

Query: 408 HNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGV 467
             ++  +Y DF                                V   +       + T  
Sbjct: 176 LRILHDVYADF--------------------------------VEKEMAVPVIRGLKTEK 203

Query: 468 LLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
               GA      E +++D  GR  Q GT   +  N    F+  + + ++   +       
Sbjct: 204 EKFPGALRSYCIEAMMQD--GRALQAGTSHNLGQNFARAFDITFTDQNNTIQYA---WTT 258

Query: 527 VFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI--TSSAVEYAQEIANLLKSHHL 580
            +G   R IG +I    ++    LP  L+PIQ +V  I                + +   
Sbjct: 259 SWGVSTRLIGALIMTHSDDEGLVLPPRLAPIQVVVVPIYKNDEERSLVMAAVEQMTAAWK 318

Query: 581 ---SIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS--- 633
                + D R+  +  YK  E  +K +P+ I  G K+ ++ ++ + R         S   
Sbjct: 319 GRLRFKVDDRDNYSPGYKFNEWELKGVPVRIEVGPKDVAKETVALARRDIPGKAGKSFVP 378

Query: 634 ---LLDAIPILTKE 644
              L + I  L  E
Sbjct: 379 QAGLTERIEALLNE 392


>gi|332992302|gb|AEF02357.1| prolyl-tRNA synthetase [Alteromonas sp. SN2]
          Length = 554

 Score =  156 bits (394), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 47/241 (19%), Positives = 97/241 (40%), Gaps = 11/241 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L        ++E   H+ + R   +  +A   SG+  W   G ++   + + +R 
Sbjct: 3   TSQYLLATQKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGLRVLNKVANIVRE 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LW++SG W+ Y   +  +K      +  R F L P +    
Sbjct: 60  EMNKAGGVEVLMPVVQPADLWEESGRWEEYGPELLRIKD-----RHQRDFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
            ++  + + SY++LP+ L +  + +R+E      G+MR R FT  DA+ F   +   ++ 
Sbjct: 115 TSLVRNEISSYKQLPINLYQIQTKFRDEVRPRF-GIMRGREFTMKDAYSFHLDDTCLDKT 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            + ++    +I+   G +   V   +       S      AE+    +     +     +
Sbjct: 174 YQTMYEAYGNIFNRMGLDYRAVIADSGSIGGNHSHEFHVLAESGEDAIAFASDSDYAANV 233

Query: 464 N 464
            
Sbjct: 234 E 234



 Score = 70.6 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 52/160 (32%), Gaps = 11/160 (6%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           I R  + G I Q+        N   ++   +     M    +   + R +   IE     
Sbjct: 390 IKRGIEVGHIFQLGSKYSEAMNCGVLSETGKHQTLTMGCYGI--GVSRIVAAAIEQNHDK 447

Query: 546 LPL-WLSPIQAIVTTITSSAV-------EYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
             + W  PI      +    +       E A+ +   L +  + +  D R E       +
Sbjct: 448 YGIMWPDPIAPFKIALIPMNMHKSHRIKEAAEALYEQLIALGIDVLFDDRKERPGVMFND 507

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
             +  IP  I+ G++    + I  +   +   Q + L  A
Sbjct: 508 MELIGIPHSIVIGERNLDNQQIEYKNRRTGEKQLLDLDSA 547


>gi|261204761|ref|XP_002629594.1| prolyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
 gi|239587379|gb|EEQ70022.1| prolyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
          Length = 606

 Score =  156 bits (394), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 84/433 (19%), Positives = 160/433 (36%), Gaps = 69/433 (15%)

Query: 247 RKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHL- 304
           + L +   L +   D SG        + I++T+  +   KIK    +  + P  + + + 
Sbjct: 110 QVLLKGQMLDY--YDVSGCFILKPHSYFIWETIQEWFNNKIKKMGVKNCSFPLFVSEDVL 167

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
            ++  H + + A +  V  A ++  + R  A++P +       +   ++S+R+LP+RL +
Sbjct: 168 KKEKDHIEGFAAEVAWVTHAGNSALE-RKIAIRPTSETVMYPYYAKWIRSHRDLPLRLNQ 226

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN-ECLKIHNLIISIYKDFGFEKI 423
           + SV R E        +R R F   + H     E     E L+I      +Y+D     +
Sbjct: 227 WNSVVRWEFKNP-QPFLRTREFLWQEGHTAHLTEAGAREEVLQILEHYAHVYEDLLAIPV 285

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +    T  EK  G                                      Y    E  +
Sbjct: 286 IRGQKTDKEKFAGG------------------------------------LYTTTVEGYI 309

Query: 484 KDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSH---SEKCHPVMIHRAVFGSIERFIGIMI 539
             A GR  Q GT   +  N    F     +      EK   + + +  +G   R IGIM+
Sbjct: 310 P-ATGRGIQGGTSHCLGQNFSKMFGITVEDPSAKPEEKKPALHVWQNSWGLSTRTIGIMV 368

Query: 540 ENFKGNLPLWLSP----IQAIVTTI-----TSSAVEYA-----QEIANLLKSHHLSIETD 585
                +  L + P    IQ ++  +     T+ A + A       +A +L++  + +E D
Sbjct: 369 MVHGDDRGLVIPPRVADIQTVIVPVGTGAKTTEAEKTALMAEIDALAAVLQAVGVRVEVD 428

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRF---GSTTTQKVSLLDA---IP 639
            R+ T  +K  +  +  +P+ +  G  E++   +   R    G      + + +    +P
Sbjct: 429 KRDYTPGWKFNDWELHGVPLRLEFGPGESAGHYVTASRRDILGKDGKSTIPITELGVQVP 488

Query: 640 ILTKESLPPDCQK 652
            L  E++  D  K
Sbjct: 489 ALL-ETIQADLYK 500


>gi|253568239|ref|ZP_04845650.1| prolyl-tRNA synthetase [Bacteroides sp. 1_1_6]
 gi|251842312|gb|EES70392.1| prolyl-tRNA synthetase [Bacteroides sp. 1_1_6]
          Length = 497

 Score =  156 bits (394), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 65/439 (14%), Positives = 162/439 (36%), Gaps = 75/439 (17%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
              E+  + +  L  + DL   +     ++     G+ I++ +   +    K+  +    
Sbjct: 10  KRSENYSQWYNDLVVKADLAEQSAVRGCMVI-KPYGYAIWEKMQRQLDDMFKETGHVNAY 68

Query: 296 TPQVLDQHLW-QQSGHWDSYRANMFAVKCA-------------DDTIKDLRTFALKPMNC 341
            P ++ +    +++ H + +      V                D   K      ++P + 
Sbjct: 69  FPLLIPKSFLSREAEHVEGFAKECAVVTHYRLKNAEDGSGVVVDPAAKLEEELIIRPTSE 128

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQM 400
                 + + ++SYR+LP+   ++ +V+R E        +R   F   + H    T+++ 
Sbjct: 129 TIIWNTYKNWIQSYRDLPILCNQWANVFRWEMR--TRLFLRTAEFLWQEGHTAHATRKEA 186

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQ 460
             E +++ N+     + +    ++  + +  E+  G                        
Sbjct: 187 EEEAIRMLNVYGEFAEKYMAVPVVKGVKSANERFAG------------------------ 222

Query: 461 DRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCH 519
                       A      E +++D  G+  Q GT   +  N    F+  +VN  ++  +
Sbjct: 223 ------------ALDTYTIEAMMQD--GKALQSGTSHFLGQNFAKAFDVQFVNKENKMEY 268

Query: 520 PVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVEY------AQ 569
              +    +G   R +G +I    ++    LP  L+PIQ ++  I  +  +        +
Sbjct: 269 ---VWATSWGVSTRLMGALIMTHSDDNGLVLPPHLAPIQVVIVPIYKNDEQLKQIDAKVE 325

Query: 570 EIANLLKSHHLSIETDF-RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
            I   LK+  +S++ D   N+   +K  ++ +K +P+ ++ G ++    ++ + R  +  
Sbjct: 326 GIVAKLKALGISVKYDNADNKRPGFKFADYELKGVPVRLVMGGRDLENNTMEVMRRDTLE 385

Query: 629 TQKVS---LLDAIPILTKE 644
            + V+   +   +  L +E
Sbjct: 386 KETVTCDGIETYVQKLLEE 404


>gi|124805808|ref|XP_001350543.1| bifunctional aminoacyl-tRNA synthetase, putative [Plasmodium
           falciparum 3D7]
 gi|74862875|sp|Q8I5R7|SYP_PLAF7 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|23496667|gb|AAN36223.1| bifunctional aminoacyl-tRNA synthetase, putative [Plasmodium
           falciparum 3D7]
          Length = 746

 Score =  156 bits (394), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 74/394 (18%), Positives = 136/394 (34%), Gaps = 57/394 (14%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEIN--TPQVLDQHLWQQSGHWDSYRAN 317
            D SG        + I++ + ++  ++IK    E +     V    L ++  H + +   
Sbjct: 279 YDISGCYILRPAAYYIWECVQAFFNKEIKKLNVENSYFPLFVTKNKLEKEKNHIEGFSPE 338

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           +  V    D+       A++P +     +VF   ++SYR+LP++L ++ +V R E     
Sbjct: 339 VAWVTKYGDSNLP-EEIAIRPTSETIMYSVFPKWIRSYRDLPLKLNQWNTVVRWEFKQPT 397

Query: 378 HGLMRVRGFTQDDAHVFCT-KEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
              +R R F   + H     +E+       I +L    Y+                    
Sbjct: 398 -PFIRTREFLWQEGHTAHKNEEEAVKLVFDILDLYRRWYE-------------------- 436

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
                           + +       I +      GA +    E       GR  Q  T 
Sbjct: 437 ----------------EYLAVPIIKGIKSEGEKFGGANFTSTAE-AFISENGRAIQAATS 479

Query: 497 QV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP--- 552
                N    F   + + +  K +   +H+  +G   R IGIMI     +  L L P   
Sbjct: 480 HYLGTNFAKMFKIEFEDENEVKQY---VHQTSWGCTTRSIGIMIMTHGDDKGLVLPPNVS 536

Query: 553 -IQAIVTTITSSAVE------YAQEIANLLKSHHLSIETDFR-NETINYKIREHSIKKIP 604
             + ++  I     +      Y ++I  +LK+  ++   D R + +  YK     ++ IP
Sbjct: 537 KYKVVIVPIFYKTTDENAIHSYCKDIEKILKNAQINCVYDDRASYSPGYKFNHWELRGIP 596

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           I I  G K+    S  I R  +     V     +
Sbjct: 597 IRIEVGPKDLQNNSCVIVRRDNNEKCNVKKESVL 630


>gi|238063301|ref|ZP_04608010.1| prolyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
 gi|237885112|gb|EEP73940.1| prolyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
          Length = 468

 Score =  156 bits (393), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 63/406 (15%), Positives = 137/406 (33%), Gaps = 53/406 (13%)

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
            R ++ L  +  L         ++     G+ I++ + + M  +IK    E    P  + 
Sbjct: 13  PRWYQDLIAKAKLADNGPVRGTMVI-RPAGYAIWERMQAEMDARIKAAGAENAYFPLFIP 71

Query: 302 QHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +   + ++ H + +   +  V              ++P +           + SYR+LP+
Sbjct: 72  ESYLKREAEHVEGFSPELAVVTHGGGKQL-AEPVVVRPTSETVIGEFMAKWIDSYRDLPL 130

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
            L ++ +V R E        +R   F   + H             +              
Sbjct: 131 LLNQWANVVRWELRP--RIFLRTSEFLWQEGHTAHATSSDARAYARRI------------ 176

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
                              L +  E++M  VL          + T      GA      E
Sbjct: 177 -------------------LHEAYEDLMVNVL---GIPVVVGLKTVRERFAGATATYTCE 214

Query: 481 YILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
            ++ D  G+  Q GT   +  N    F+  Y ++   + H        +G+  R +G +I
Sbjct: 215 GMMGD--GKALQLGTSHELGQNFAKAFDISYSSAEGGREHA---WTTSWGTSTRMLGGLI 269

Query: 540 ----ENFKGNLPLWLSPIQAIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETI-N 592
               ++    +P  L+P+QA V  +       E A ++ + L+   + +  D R +T   
Sbjct: 270 MAHGDDNGLRVPPRLAPVQAYVMVVKAGDGVGEAAAKLCDALRDAGVRVALDDRTDTPFG 329

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
            +  +  ++  P+ +  G ++ +  +  + R    +     + D +
Sbjct: 330 RRAVDAELRGYPVRVEVGPRDLAAGNAVVVRRTDGSKSPTPVADVV 375


>gi|302336805|ref|YP_003802011.1| prolyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
 gi|301633990|gb|ADK79417.1| prolyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
          Length = 476

 Score =  156 bits (393), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 68/423 (16%), Positives = 157/423 (37%), Gaps = 61/423 (14%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
             E+  + +  +     L   +     ++     G+ +++ +   +    K   +     
Sbjct: 8   RSENYSQWYVDIILNAKLADYSPVKGSMVI-RPHGYALWEAIQRNLDDMFKATGHTNAYF 66

Query: 297 PQVLDQHL-WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P ++ +    +++ H + +   +  V  A     +     ++P +     +++   ++SY
Sbjct: 67  PLLIPESFIKKEAEHVEGFSPELAVVTHAGGEELE-EPLVIRPTSETIIWSMYKKWIQSY 125

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           R+LP+ + ++ +V R E        +R   F   + H     E+   E  +    ++++Y
Sbjct: 126 RDLPLLINQWANVLRWEKR--TRLFLRTSEFLWQEGHTAHATEK---EAREETLRMLNVY 180

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMK-GVLDTIKNSSQDRINTGVLLGEGAF 474
           K+F                         AE  M   VL  +K+ S+           GA 
Sbjct: 181 KEF-------------------------AEKWMAIPVLTGVKSPSEKF--------AGAI 207

Query: 475 YGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
                E +++D   +  Q GT   +  N    F+  + N      +   +    +G   R
Sbjct: 208 DTYAIEAMMQD--HKALQAGTSHFLGQNFAKAFDVTFQNDTGSLEY---VWATSWGVSTR 262

Query: 534 FIGIMI----ENFKGNLPLWLSPIQAIVTTIT-----SSAVEYAQEIANLLKSHHLSIET 584
            +G +I    ++    +P  LSP++A++  I         V YA+++ + +K     ++ 
Sbjct: 263 LVGALIMTHSDDKGLVVPPKLSPVEAVIIPIFRNKNKEEVVGYARKLYDRMKDE-FRVKL 321

Query: 585 D-FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           D   + +  +K  E  +   P+ I  G ++       + R  +   + V + +A+P    
Sbjct: 322 DADDSNSPGWKFAEWEMLGCPVRIELGPRDMENGKAVLVRRDNGEKEIVDI-EAVPARVG 380

Query: 644 ESL 646
           E L
Sbjct: 381 ELL 383


>gi|329893675|ref|ZP_08269809.1| Prolyl-tRNA synthetase [gamma proteobacterium IMCC3088]
 gi|328923602|gb|EGG30914.1| Prolyl-tRNA synthetase [gamma proteobacterium IMCC3088]
          Length = 571

 Score =  156 bits (393), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 57/273 (20%), Positives = 101/273 (36%), Gaps = 17/273 (6%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       ++E   HR + R   +  +A   SG+  W   G K+ + +   +R 
Sbjct: 3   TSQTLISTLKETPADAEVISHRLMLRAGMIKKLA---SGLYTWMPLGLKVLRKVERIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LWQ+SG W  Y   +  +       +  R F L P +    
Sbjct: 60  EMDAAGAIELLMPVVQPAELWQESGRWAQYGPELLRMHD-----RHTREFCLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+   +  + +R+E      G+MR R FT  DA+ F   +    E 
Sbjct: 115 TDIARNELSSYKQLPLNFYQIQTKFRDEIRPRF-GVMRAREFTMKDAYSFHIDQASLEET 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +H    +++   G     V+  T       S      A++      D I  S++   
Sbjct: 174 YWVMHRAYSNVFDRLGLMYRPVEADTGSIGGSHSHEFHVLADSGE----DDIAFSNESDF 229

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
              V L E     P  E         +     +
Sbjct: 230 AANVELAEAV--APNIERPAPSQPMTELHTPGV 260



 Score = 92.9 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 68/165 (41%), Gaps = 13/165 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           I R  + G I Q+        NA  ++++ +      +    +G  I R +   IE N  
Sbjct: 403 IKRGIEVGHIFQLGQKYSEAMNAQVLDANGKAQT---LSMGCYGIGISRIVAAAIEQNHD 459

Query: 544 GNLPLW---LSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
               +W   ++P Q  +  +    + +  + A+ +   L    + +  D RNE    K  
Sbjct: 460 DKGIIWPDAMAPYQVAIVPLNMQKSEAVAQAAETLYAQLTDAGIEVLLDDRNERPGIKFA 519

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           +  +  IP  I+ GD+  +E  +  +   +  ++ +++ D + +L
Sbjct: 520 DMELIGIPHRIVIGDRSLAEGQLEYKHRAAPDSENIAVTDTLTVL 564


>gi|302537186|ref|ZP_07289528.1| prolyl-tRNA synthetase [Streptomyces sp. C]
 gi|302446081|gb|EFL17897.1| prolyl-tRNA synthetase [Streptomyces sp. C]
          Length = 470

 Score =  156 bits (393), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 71/419 (16%), Positives = 158/419 (37%), Gaps = 55/419 (13%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
             E   R ++ L  + +L         ++     G+ +++ +   M  +IK+   +    
Sbjct: 10  QAEDFPRWYQDLINKAELADNGPVRGTMVI-RPYGYGLWERMQQEMDARIKEAGAQNAYF 68

Query: 297 PQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P  + Q    +++ H + +   +  V        +     ++P +       F+  ++SY
Sbjct: 69  PLFIPQSYLTKEAEHVEGFAPELAVVTHGGGKELE-EPVVVRPTSETIINDYFSKWVQSY 127

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           R+LP+ + ++ +V R E        +R   F   + H                       
Sbjct: 128 RDLPLLINQWANVVRWEMRP--RVFLRTSEFLWQEGHTAHAT------------------ 167

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                     + +     R+  D   D   N++   +   + ++++R         GA  
Sbjct: 168 ---------YEDARDYAARIHRDVYGDFMTNVLGIDVVLGRKTAKERF-------AGAIN 211

Query: 476 GPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
               E ++ D  G+  Q GT   +  N    FN  Y++   ++    ++ +  +G   R 
Sbjct: 212 TLTLEGMMGD--GKALQMGTSHELGTNFAKAFNTQYLSKEGQQE---LVWQTSWGVSTRM 266

Query: 535 IGIMI----ENFKGNLPLWLSPIQAIVTTI-TSSAVEYAQEIANLLKSHHLSIETDFRNE 589
           +G +I    ++    +P  L+ +Q +V  I    AV   +E+ + LK+  + +  D R +
Sbjct: 267 VGGLIMSHGDDNGLRVPPRLANVQVVVMAIKGDEAVAKVRELGDRLKAAGIRVHVDDRVD 326

Query: 590 TI-NYKIREHSIKKIPIIIICGDKEASERSIGIRRF---GSTTTQKVSLLDAIPILTKE 644
           T    +  +  +K +P+ I  G ++    +  + R    G T  Q  +L+D +P +  E
Sbjct: 327 TPFGRRAVDWELKGVPVRIEIGPRDLEAGTAMLARRIPGGKTPVQIDALVDLLPKVLDE 385


>gi|158335473|ref|YP_001516645.1| prolyl-tRNA synthetase [Acaryochloris marina MBIC11017]
 gi|189083486|sp|B0C230|SYP_ACAM1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|158305714|gb|ABW27331.1| prolyl-tRNA synthetase [Acaryochloris marina MBIC11017]
          Length = 600

 Score =  156 bits (393), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 62/249 (24%), Positives = 97/249 (38%), Gaps = 8/249 (3%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q           E+E   H+ L R   +  +   GSG+  +    W++ Q +   +R +
Sbjct: 4   SQMLFVTLREDPAEAEIPSHKLLLRAGYIRRV---GSGIYAYLPLMWRVLQKVSQIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E   PQ+    LWQ+SG WD+Y      +    D  +  R   L P +     
Sbjct: 61  MDAAGAQECLLPQIQPAELWQESGRWDTYTQAEGIMFALQD--RQDRELGLGPTHEEVIT 118

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           AV    ++SYR+LP+ L +  + +R+E      GLMR R F   DA+ F T E       
Sbjct: 119 AVARDMIRSYRQLPLNLYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSFSTDEADLKIIY 177

Query: 406 -KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            K+H+   +I +  G     V   +      GS      AE     VL T        + 
Sbjct: 178 SKMHDAYCNILQRSGLAYRAVDADSGAIGGSGSQEFMVLAEAGEDEVLYTDDGKYAANVE 237

Query: 465 TGVLLGEGA 473
             V     A
Sbjct: 238 KAVSRPADA 246



 Score = 83.7 bits (205), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 72/182 (39%), Gaps = 11/182 (6%)

Query: 468 LLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAV 527
            +G+ A + PK    L+ A G +      Q+         A Y N    K  P+++    
Sbjct: 416 QVGDRAVHDPKQ--TLQTARGIEI-GHIFQLGTKYSQALGATYTNEAG-KEQPLVMGCYG 471

Query: 528 FGSIERFIGIMIENFKGNLPLWL---SPIQAIVTT---ITSSAVEYAQEIANLLKSHHLS 581
            G        + +++  +  +W    +P  AI+       S  VE A+++ + L +  + 
Sbjct: 472 VGVSRLAQAAVEQSYDKDGIVWPVAIAPYHAIIIIPNGKDSDQVEAAEKLYSELNAAGIE 531

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
              D R E    K ++  +  IP  I+ G +   E ++ +    +    +++L   +P L
Sbjct: 532 TLLDDRTERAGVKFKDADLIGIPYRIVTG-RSLKEGNVEMVERATHDAHQIALDQVLPTL 590

Query: 642 TK 643
            +
Sbjct: 591 KE 592


>gi|254495081|ref|ZP_05108005.1| prolyl-tRNA synthetase [Polaribacter sp. MED152]
 gi|85819431|gb|EAQ40588.1| prolyl-tRNA synthetase [Polaribacter sp. MED152]
          Length = 492

 Score =  156 bits (393), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 68/440 (15%), Positives = 162/440 (36%), Gaps = 73/440 (16%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
           +++ L    E   + + +L  + DL   +     ++     G+ I++ + + + R  K+ 
Sbjct: 1   MSKKLTKRAEDYSKWYNELVVKADLAENSAVRGCMVI-KPYGFAIWEKMQAELDRMFKET 59

Query: 290 DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCA--------------DDTIKDLRTF 334
            +E    P  + + L++ +  + + +      V                 D   K     
Sbjct: 60  GHENAYFPLFVPKSLFEAEEKNAEGFAKECAVVTHYRLQNDPDNEGKLRVDPEAKLEEEL 119

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV- 393
            ++P +       +   ++SYR+LP+ + ++ +V R E        +R   F   + H  
Sbjct: 120 VVRPTSEAIIWNTYKGWIQSYRDLPLLINQWANVVRWEMR--TRLFLRTAEFLWQEGHTA 177

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
             TK +   E  ++ ++     ++F    ++  + +  E+  G++  +            
Sbjct: 178 HATKAEAVAEAKQMQDVYAEFAENFMAMPVIKGVKSDSERFAGAEDTY------------ 225

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVN 512
                                     E +++D  G+  Q GT   +  N    F+  Y +
Sbjct: 226 ------------------------TIEALMQD--GKALQAGTSHFLGQNFAKAFDVKYTS 259

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTIT------S 562
              ++ +   +    +G   R IG +I    ++    LP  L+PIQ ++  I        
Sbjct: 260 KEGKQEY---VWATSWGVSTRLIGGLIMTHSDDNGLVLPPKLAPIQVVIVPIYKNDEQLE 316

Query: 563 SAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGI 621
           +  +    I+  L    +S++ D R+      K  E+ +K +P+ I  G ++    ++ +
Sbjct: 317 AISDKVNAISIELGKKGISVKYDNRDTFRPGAKFAEYELKGVPVRIALGARDLENGTLEV 376

Query: 622 RRFGSTTTQKVSLLDAIPIL 641
            R  +     + + DA+  +
Sbjct: 377 ARRDTLEKNTIDINDAVSYI 396


>gi|53713725|ref|YP_099717.1| prolyl-tRNA synthetase [Bacteroides fragilis YCH46]
 gi|60681995|ref|YP_212139.1| prolyl-tRNA synthetase [Bacteroides fragilis NCTC 9343]
 gi|265764051|ref|ZP_06092619.1| prolyl-tRNA synthetase [Bacteroides sp. 2_1_16]
 gi|81314941|sp|Q5LCF0|SYP_BACFN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|81382377|sp|Q64TJ6|SYP_BACFR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|52216590|dbj|BAD49183.1| prolyl-tRNA synthetase [Bacteroides fragilis YCH46]
 gi|60493429|emb|CAH08215.1| prolyl-tRNA synthetase [Bacteroides fragilis NCTC 9343]
 gi|263256659|gb|EEZ28005.1| prolyl-tRNA synthetase [Bacteroides sp. 2_1_16]
 gi|301163433|emb|CBW22984.1| prolyl-tRNA synthetase [Bacteroides fragilis 638R]
          Length = 497

 Score =  156 bits (393), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 65/438 (14%), Positives = 156/438 (35%), Gaps = 73/438 (16%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
              E+  + +  L  + DL   +     ++     G+ I++ +   +    K+  +    
Sbjct: 10  KRSENYSQWYNDLVVKADLAEQSAVRGCMVI-KPYGYAIWEKMQRQLDDMFKETGHVNAY 68

Query: 296 TPQVLDQHLW-QQSGHWDSYRANMFAVKCA-------------DDTIKDLRTFALKPMNC 341
            P ++ +    +++ H + +      V                D   K      ++P + 
Sbjct: 69  FPLLIPKSFLSREAEHVEGFAKECAVVTHYRLKNAEDGSGVVVDPAAKLEEELIIRPTSE 128

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
                 + + ++SYR+LP+   ++ +V+R E        +R   F   + H   T     
Sbjct: 129 TIIWNTYKNWIQSYRDLPILCNQWANVFRWEMR--TRLFLRTAEFLWQEGH---TAHATR 183

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E  +    ++++Y +F                                    +      
Sbjct: 184 EEAEEEAIRMLNVYAEF--------------------------------AEKYMAVPVVK 211

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHP 520
            + +      GA      E +++D  G+  Q GT   +  N    F+  +VN  ++  + 
Sbjct: 212 GVKSANERFAGALDTYTIEAMMQD--GKALQSGTSHFLGQNFAKAFDVQFVNKENKLEY- 268

Query: 521 VMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVEY------AQE 570
             +    +G   R +G +I    ++    LP  L+PIQ ++  I  +  +        + 
Sbjct: 269 --VWATSWGVSTRLMGALIMTHSDDNGLVLPPHLAPIQVVIVPIYKNDEQLKLIDAKVEG 326

Query: 571 IANLLKSHHLSIETDF-RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           I   LK   +S++ D   N+   +K  ++ +K +P+ ++ G ++    ++ + R  +   
Sbjct: 327 IVARLKQLGISVKYDNADNKRPGFKFADYELKGVPVRLVMGGRDLENNTMEVMRRDTLEK 386

Query: 630 QKVS---LLDAIPILTKE 644
           + V+   +   +  L +E
Sbjct: 387 ETVTCDGIETYVQNLLEE 404


>gi|219849360|ref|YP_002463793.1| prolyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
 gi|259511579|sp|B8G3V5|SYP_CHLAD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|219543619|gb|ACL25357.1| prolyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
          Length = 480

 Score =  156 bits (393), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 77/434 (17%), Positives = 151/434 (34%), Gaps = 61/434 (14%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
              + +        + +  + RE DL  +AE   G I     GW I++ +   +  +IK 
Sbjct: 1   MPKEVITQRSVDYNQWYLDIVREADLAEVAEVVRGCIVVKAHGWAIWELMQRALDDRIKA 60

Query: 290 -DYEEINTPQVLDQHL-WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
             +  +  P ++ +    +++ H + +   +  V  A         + ++P +       
Sbjct: 61  TGHANVQFPLLIPKSFIMKEAEHVEGFAPEVAEVTRAGGEEL-AEPYVIRPTSETIIGYF 119

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
           ++  ++SYR+LP+   ++ +V R E        +R   F   +               + 
Sbjct: 120 YSKWIRSYRDLPLLYNQWANVMRWEMR--TRPFLRTAEFWWQEG--HTAHATEAEAEEET 175

Query: 408 HNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGV 467
             ++  +Y DF                                V   +       + T  
Sbjct: 176 LRILHEVYADF--------------------------------VEKEMAVPVIRGLKTEK 203

Query: 468 LLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
               GA      E +++D  GR  Q GT   +  N    F+  + + H+   +       
Sbjct: 204 EKFPGALRSYCIEAMMQD--GRALQAGTSHNLGQNFARAFDITFTDQHNTIQYA---WTT 258

Query: 527 VFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVEY--AQEIANLLKSHHL 580
            +G   R IG +I    ++    LP  L+PIQ +V  I  +  E     E  N + +   
Sbjct: 259 SWGVSTRLIGALIMTHSDDEGLVLPPRLAPIQVVVVPIYKNDEERSAVMEAVNRMTAAWK 318

Query: 581 ---SIETDFRN-ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS--- 633
                + D R+  +  YK  E  +K +P+ I  G K+ ++ ++ + R         S   
Sbjct: 319 GRLRFKVDDRDTYSPGYKFNEWELKGVPVRIEIGPKDVAKETVALARRDMPGKAGKSFVP 378

Query: 634 ---LLDAIPILTKE 644
              L + I  L  E
Sbjct: 379 QAGLTERIEALLAE 392


>gi|194336185|ref|YP_002017979.1| prolyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1]
 gi|259511610|sp|B4SG51|SYP_PELPB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|194308662|gb|ACF43362.1| prolyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1]
          Length = 481

 Score =  156 bits (393), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 67/422 (15%), Positives = 148/422 (35%), Gaps = 58/422 (13%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
             E   + +  L R   L   A+    +      G+ I++ + + + R  K+  +     
Sbjct: 8   RSEDYSQWYIDLVRSAKLADYADVRGCMDI-RPNGYAIWEKMQAALDRMFKETGHVNAYF 66

Query: 297 PQVLDQHL-WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P  + +    +++ H + +      V              ++P +     + +   ++SY
Sbjct: 67  PLFIPESFIAKEAEHIEGFAPECAVVTHGGGEEL-AEKLYIRPTSETIIWSSYKKWIQSY 125

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISI 414
           R+LP+ + ++ +V R E        +R   F   + H      E+   E L++ N+  + 
Sbjct: 126 RDLPILINQWANVVRWEMR--TRLFLRTTEFLWQEGHTAHANPEESQEEVLRMINVYKTF 183

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            +++    +++   T  EK  G+   W                                 
Sbjct: 184 AEEYMAMPVIMGKKTDNEKFAGAVDTW--------------------------------- 210

Query: 475 YGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
                E +++D+  +  Q GT   +  N    F+  +        +   +    +G   R
Sbjct: 211 ---CIEAMMQDS--KALQAGTSHNLGQNFAKAFDCQFQTKDGVLDY---VWATSWGVSTR 262

Query: 534 FIGIMIENFKGNLPLWLSP----IQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETD 585
            IG +I     +  L L P     Q ++  I     ++ +E A  +A  L  + +    D
Sbjct: 263 LIGALIMAHSDDRGLVLPPKLATRQVVIIPILRGDKAAVIERANALAQELNKNGIPSFVD 322

Query: 586 FRN-ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
                +  +K  E+ ++ IPI I  G ++  +      R  +    +++L + +P    E
Sbjct: 323 SSEQNSPGWKFAEYELQGIPIRIELGPRDIEKGICIAARRDTLEKTELALDETLPDQISE 382

Query: 645 SL 646
            L
Sbjct: 383 IL 384


>gi|156839714|ref|XP_001643545.1| hypothetical protein Kpol_1008p26 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156114160|gb|EDO15687.1| hypothetical protein Kpol_1008p26 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 674

 Score =  156 bits (393), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 80/407 (19%), Positives = 146/407 (35%), Gaps = 61/407 (14%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ-VLDQHLWQQSGHWDSYRAN 317
            D SG        + I++ +  Y   KIK    +    P  V  + L ++  H + +   
Sbjct: 198 YDVSGCYILRPPSYAIWEAIQKYFDAKIKGLGVQNAYFPMFVSSRVLEKEKDHIEGFAPE 257

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           +  V  A  +  +    A++P +       +   ++SYR+LP++L ++ SV R E     
Sbjct: 258 VAWVTKAGQSELE-EPIAIRPTSETVMYPYYAKWIQSYRDLPLKLNQWNSVVRWEFKHP- 315

Query: 378 HGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
              +R R F   + H  F  +++   E L+I +    +Y++     ++    T  EK  G
Sbjct: 316 QPFLRTREFLWQEGHTVFLNEKEAQEEVLQILDFYAGVYEELLAVPVVKGKKTEKEKFAG 375

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
            D                                    +    E  +    GR  Q  T 
Sbjct: 376 GD------------------------------------FTTTVEGYIP-QTGRGIQGATS 398

Query: 497 Q-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI-- 553
             +  N    FN    N        +  ++  +G   R IG+M+     N  L + P   
Sbjct: 399 HHLGQNFSKMFNLSVENPLGPDHPKIFAYQNSWGLSTRVIGVMVMIHSDNKGLVIPPRVS 458

Query: 554 --QAIVTTIT----------SSAVEYAQEIANLLKSHHLSIETDF-RNETINYKIREHSI 600
             QA+V  +               E A+++ + LK   +    D+  N T  +K  ++ +
Sbjct: 459 QFQAVVVPVGITKKTSEEQRKKIHEAARDVESRLKKSDVRAFGDYNDNYTPGWKFAQYEL 518

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA---IPILTKE 644
           K IP+ +  G K+  E  + + R   +    V L +    IP +  E
Sbjct: 519 KGIPLRVEMGPKDIEESQVTVVRRNDSRKYTVKLSELESRIPEIMDE 565


>gi|311694949|gb|ADP97822.1| prolyl-tRNA synthetase [marine bacterium HP15]
          Length = 577

 Score =  156 bits (393), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 46/249 (18%), Positives = 94/249 (37%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  +        ++E   H+ + R   +  +A    G+  W   G +  + +   +R 
Sbjct: 3   ASRYLIATQKETPADAEIISHQLMLRAGMIRKLAA---GLYTWLPMGLRTLRKVERIVRE 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +E+  P V    LW++SG W  Y   +  +K      +  R F   P +    
Sbjct: 60  EMDKSGAQEVLMPAVQPAELWEESGRWTQYGGELLRMKD-----RHGRDFCFGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + + SY+ELP    +  + +R+E      G+MR R F   DA+ F    +  NE 
Sbjct: 115 TDLIRNEISSYKELPANFYQVQTKFRDERRPRF-GVMRAREFLMKDAYSFHLNAESLNET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            + +H    +I+  FG +   V+  +       S      A +    ++ +  +     I
Sbjct: 174 YELMHRTYCAIFDRFGLDYRAVQADSGAIGGSASHEFHVLASSGEDDIVFSTGSDYAANI 233

Query: 464 NTGVLLGEG 472
                +   
Sbjct: 234 EKAEAVAPS 242



 Score = 86.4 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/166 (17%), Positives = 58/166 (34%), Gaps = 7/166 (4%)

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNL 546
           I R  + G I    N  S      V   + K   + +     G        + +N   N 
Sbjct: 407 IRRGIEVGHIFKLGNKYSTAMNATVLDENGKTVIMDMGCYGLGVSRVVAAAIEQNHDENG 466

Query: 547 PLWL---SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
            +W    +P Q  + T+    + +  E  +++   L+     +  D R E    K  +  
Sbjct: 467 IIWPDAIAPFQVAIVTLNAHKSPTVAEAGEKLYEQLRQAGYDVLLDDRKERPGVKFADME 526

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           +  IP   +  ++  +  ++  +       Q V + +A+P L   S
Sbjct: 527 LIGIPHRFVVSERGLAAGTLEYKGRKDAEKQDVPVAEALPFLVNAS 572


>gi|300702990|ref|YP_003744592.1| proline--tRNA ligase [Ralstonia solanacearum CFBP2957]
 gi|299070653|emb|CBJ41948.1| Proline--tRNA ligase [Ralstonia solanacearum CFBP2957]
          Length = 574

 Score =  156 bits (393), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 58/301 (19%), Positives = 114/301 (37%), Gaps = 13/301 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       ++E   H+ + R   +  +   G+G+  +   G +  + +   +R 
Sbjct: 3   ASQFFISTLKEAPADAEIVSHKLMMRAGMIKKL---GAGIYTYMPVGLRAIRKVEQIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LWQ++G WD     +  VK      +  R   ++P +    
Sbjct: 60  EMNAAGAVEMLMPVVQPGELWQETGRWDKMGEELMRVKD-----RHERDLVIQPTSEEVV 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
             +    ++SY+++PV   +  + +R+E      G+MR R FT  DA+ F    E M   
Sbjct: 115 TDIARTEIRSYKQMPVNFYQIQTKFRDERRPRF-GIMRGREFTMKDAYSFDRDVEGMKVS 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             K+ +    I++ FG     V          GS      AE     ++ + ++     I
Sbjct: 174 YQKMFDAYTRIFQRFGLAFRAVAADNGAIGGSGSHEFHVIAETGEDAIVYSPESDYAANI 233

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI--QVDFNLPSRFNAFYVNSHSEKCHPV 521
                L   A  GP  E + K +     +C  +  Q+   L     +  +    +   P 
Sbjct: 234 EAAEALAPSAPRGPAAEPLAKTSTPGRAKCEAVAEQLGIPLQRTVKSIVLAKEVDGGEPQ 293

Query: 522 M 522
           +
Sbjct: 294 I 294



 Score = 82.5 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 24/163 (14%), Positives = 61/163 (37%), Gaps = 11/163 (6%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G +  +        +A +++ +  K  P+++     G I R +G  IE       
Sbjct: 409 RGIEVGHVFMLGTRYSESMSATFLDENG-KTQPMVMGCYGIG-ITRILGAAIEQNYDARG 466

Query: 546 --LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
              P+ ++P + ++  +    + +    A  +   L +  + +  D R E       +  
Sbjct: 467 IIWPVSIAPFEVVICPVGYDRSEAVRAEADRLHAELAAAGIDVILDDRGERPGVMFADWE 526

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +  +P  ++ G++   E  + ++         V+  D +  L 
Sbjct: 527 LIGVPFRVVVGERGLKEGKLELQGRRDEAATAVAPADVLATLK 569


>gi|86742942|ref|YP_483342.1| prolyl-tRNA synthetase [Frankia sp. CcI3]
 gi|114152196|sp|Q2J529|SYP_FRASC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|86569804|gb|ABD13613.1| prolyl-tRNA synthetase [Frankia sp. CcI3]
          Length = 468

 Score =  156 bits (393), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 67/415 (16%), Positives = 148/415 (35%), Gaps = 56/415 (13%)

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
            R ++ +  + +L         ++     G+ I++ + + +  +IK         P  + 
Sbjct: 12  PRWYQDVLAKAELADNGPVRGTMVI-RPYGYAIWERMQAEVDSRIKAAGAVNAYFPLFIP 70

Query: 302 QH-LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  L +++ H + +   +  V        +     ++P +            +SYR+LP+
Sbjct: 71  ESYLRREAEHVEGFSPELAVVTIGGGKELE-EPVVVRPTSETVIGEYLAKWTQSYRDLPL 129

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
            L ++ +V R E    L   +R   F   + H         +       + + +Y+DF  
Sbjct: 130 LLNQWANVVRWELRPRL--FLRSSEFLWQEGHTAHA--DEADAAAYARRIALEVYRDF-- 183

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
               +         VG                          + T      GA      E
Sbjct: 184 ----MTQVLAVPVFVG--------------------------VKTRRERFAGATNTMTCE 213

Query: 481 YILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
            ++ D  G+  Q  T   +  N    F+  ++ +   +    +     +G   R +G +I
Sbjct: 214 GMMGD--GKALQMATSHELGQNFARAFDIDFLGADGARH---LAWTTSWGCSTRMVGGLI 268

Query: 540 ----ENFKGNLPLWLSPIQAIVTTITSS--AVEYAQEIANLLKSHHLSIETDFRNE-TIN 592
               ++    +P  L+P Q +V  +      V  A++IA  L    L ++ D R   +  
Sbjct: 269 MAHGDDNGLRVPPRLAPTQVVVLPVRDEETVVAKARQIAAALTDAGLRVQVDARPGLSFG 328

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA---IPILTKE 644
            ++ +  IK IP+ +  G ++ +  ++ + R  ++    V L +    +P+L  E
Sbjct: 329 RRVTDAEIKGIPVRVEVGPRDLAAGNVTLVRRDTSEKVPVPLAEVATRVPVLLGE 383


>gi|189461379|ref|ZP_03010164.1| hypothetical protein BACCOP_02034 [Bacteroides coprocola DSM 17136]
 gi|189431908|gb|EDV00893.1| hypothetical protein BACCOP_02034 [Bacteroides coprocola DSM 17136]
          Length = 496

 Score =  156 bits (393), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 68/438 (15%), Positives = 155/438 (35%), Gaps = 73/438 (16%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
              E+  + +  L  + DL   +     ++     G+ I++ +   +    K   +    
Sbjct: 10  KRSENYSQWYNDLVVKADLAEQSPVRGCMVI-KPYGYAIWEKMQRILDDMFKATGHVNAY 68

Query: 296 TPQVLDQH-LWQQSGHWDSYRANMFAVKCA-------------DDTIKDLRTFALKPMNC 341
            P ++ +  L +++ H + +      V                D   K      ++P + 
Sbjct: 69  FPLLIPKSYLSREAEHVEGFAKECAVVTHYRLKNAEDGSGVIVDPAAKLEEELIIRPTSE 128

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
               + + + + SYR+LP+   ++ +V R E        +R   F   + H   T     
Sbjct: 129 TIIWSTYKNWINSYRDLPILCNQWANVMRWEMR--TRLFLRTAEFLWQEGH---TAHATR 183

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E       ++ +Y DF                                    +      
Sbjct: 184 EEAEAEAQKMLHVYGDF--------------------------------AEKYMAVPVIK 211

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHP 520
            + +      GA      E +++D  G+  QCGT   +  N    FN  +V+ +++  + 
Sbjct: 212 GVKSANERFAGALDTYTIEGLMQD--GKALQCGTSHFLGQNFAKAFNVQFVDKNNKLDY- 268

Query: 521 VMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVEY------AQE 570
             +    +G   R +G +I    ++    LP  L+PIQ ++  I  +  +        + 
Sbjct: 269 --VWATSWGVSTRLMGALIMTHSDDNGLVLPPHLAPIQVVIVPIYKNDEQLKQIDAKVEG 326

Query: 571 IANLLKSHHLSIETDF-RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           I   L+   +S++ D   N+   +K  ++ +K +P+ ++ G ++    ++ I R  +   
Sbjct: 327 IVTKLREMGISVKYDNADNKRPGFKFADYELKGVPVRLVMGGRDLENNTMEIMRRDTLEK 386

Query: 630 QKVS---LLDAIPILTKE 644
           +  S   + + +  L +E
Sbjct: 387 ETRSCDGIEEYVKNLLEE 404


>gi|256820371|ref|YP_003141650.1| prolyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271]
 gi|256581954|gb|ACU93089.1| prolyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271]
          Length = 492

 Score =  156 bits (393), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 71/442 (16%), Positives = 168/442 (38%), Gaps = 73/442 (16%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
           +++ L    E   + + +L  + DL   +     ++     G+ I++ + + + R  K+ 
Sbjct: 1   MSKNLTSRSEDYSKWYNELVVKADLAESSGVRGCMVI-KPYGYAIWEKMQAELDRMFKET 59

Query: 290 DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCA--------------DDTIKDLRTF 334
            +     P  + +  ++ +  + + +      V                 D   K     
Sbjct: 60  GHTNAYFPLFVPKSYFEAEEKNAEGFAKECAVVTHYRLKADPNEKGKLMVDPEAKLEEEL 119

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV- 393
            ++P +       + + ++SYR+LP+ + ++ +V R E        +R   F   + H  
Sbjct: 120 IVRPTSEAIIWNTYKNWIQSYRDLPILINQWANVVRWEMR--TRLFLRTAEFLWQEGHTA 177

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
             TK +   E  K+ N+     ++F    ++  + +  E+  G+D  +            
Sbjct: 178 HATKAEAIEEAQKMMNVYADFVENFMAVPVIKGVKSESERFAGADDTY------------ 225

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVN 512
                                     E +++D  G+  Q GT   +  N    F+  YV+
Sbjct: 226 ------------------------CIEALMQD--GKALQAGTSHFLGQNFAKAFDVKYVS 259

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTIT------S 562
              ++ +   +  + +G   R +G +I    ++    LP  L+PIQ ++  I        
Sbjct: 260 KEGKQEY---VWASSWGVSTRLMGALIMTHSDDNGLVLPPKLAPIQVVIVPIYKGAEQLE 316

Query: 563 SAVEYAQEIANLLKSHHLSIETDFRN-ETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
               + Q +   LK H++S++ D R+ ++  +K  E+ +K IP+ +  G ++    +  +
Sbjct: 317 KVRSHIQPLIEELKKHNISVKFDDRDTQSPGFKFHEYELKGIPVRLAVGQRDIEHNTFEV 376

Query: 622 RRFGSTTTQKVSLLDAIPILTK 643
            R  + T + V+    +  + +
Sbjct: 377 ARRDTLTKETVAGDQIVAHIQQ 398


>gi|323448551|gb|EGB04448.1| hypothetical protein AURANDRAFT_32534 [Aureococcus anophagefferens]
          Length = 579

 Score =  156 bits (393), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 75/386 (19%), Positives = 134/386 (34%), Gaps = 60/386 (15%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTP----QVLDQHLWQQSGHWDSYRANM 318
           SG        + I++ +       IKD+  E+        V    L  +  H D +   +
Sbjct: 104 SGCYILRPWSFGIWEQIQKAFDGWIKDEPLEVENCYFPLFVTKGALEAEEDHVDGFAPEV 163

Query: 319 FAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLH 378
             V  + D+       A++P +       F   L+S+R+LP++L ++ SV R E      
Sbjct: 164 AWVTRSGDSEL-AEPIAIRPTSETIMYPEFAKWLRSHRDLPLKLNQWCSVVRWEFKYPT- 221

Query: 379 GLMRVRGFTQDDAHV--FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
             +R R F   + H   +   E        I  L   +Y+D     ++    T  EK  G
Sbjct: 222 PFLRSREFLWQEGHTAHYELAEADAM-VYAILGLYKKVYEDLLAVPVIPGTKTEKEKFAG 280

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
                      ++                              E  + D  GR  Q  T 
Sbjct: 281 ----------GLR--------------------------TTTVEAYI-DGSGRAIQGATS 303

Query: 497 Q-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL----S 551
             +  N    +     ++       V   +  +G   R IG+M+     +  L L    +
Sbjct: 304 HNLGQNFGKIYGIEVESADGSGGKRVP-WQTSWGLTTRSIGVMVMVHSDDQGLVLPPRVA 362

Query: 552 PIQAIVTTITSSAVEYAQ------EIANLLKSHHLSIETDFR-NETINYKIREHSIKKIP 604
           P+Q +V  I S A   A+       +   LK+  L +  D R N++  +K      K +P
Sbjct: 363 PVQVVVIPIISKACPLAELQGFVDSVKAELKAAGLRVRVDDRGNQSPGWKYNHWEQKGVP 422

Query: 605 IIIICGDKEASERSI-GIRRFGSTTT 629
           + +  G ++A+ +S+  +RR      
Sbjct: 423 LRVEVGPRDAAAQSVMAVRRVDGGKK 448


>gi|145297802|ref|YP_001140643.1| prolyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
           A449]
 gi|166980094|sp|A4SJ23|SYP_AERS4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|142850574|gb|ABO88895.1| prolyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
           A449]
          Length = 574

 Score =  156 bits (393), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 51/223 (22%), Positives = 96/223 (43%), Gaps = 11/223 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTLKETPSDAEVVSHQLMLRAGMIRKLA---SGMYAWLPSGLRVLKKIENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E++ P V    LWQ+SG WD Y   +  +     T +  R F L P +    
Sbjct: 60  EMNNAGAIEVSMPVVQPAELWQESGRWDDYGPELCRL-----TDRHNRPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
            ++  + + SY++LP+ L +  + +R+E      G+MR R F   DA+ F   +    E 
Sbjct: 115 TSLVRYEVNSYKQLPLNLYQIQTKFRDEVRPRF-GVMRGREFLMKDAYSFHIDKASLIET 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
             ++H    + +   G     V+  T      GS      AE+
Sbjct: 174 YERMHAAYCAAFTRMGLNFRPVQADTGSIGGTGSHEFQVLAES 216



 Score = 90.2 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 29/166 (17%), Positives = 61/166 (36%), Gaps = 13/166 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           + R  + G I Q+         A  +   +E    V +    +G  + R +   IE    
Sbjct: 407 LKRGIEVGHIFQLGTKYSEAMKASVL---NEGGKSVTMEMGCYGIGVSRLVAAAIEQNND 463

Query: 545 N----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                 P  ++P +  +  +    +    E AQ+    LK+  + +  D R E       
Sbjct: 464 QYGIIWPDAIAPFEVAIVPMNMHKSERVAEQAQQFYAELKAAGVDVLFDDRKERPGVMFA 523

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +  +  +P  I+ GD+      +  +   S   Q+V++ + + +L 
Sbjct: 524 DMELLGVPHAIVIGDRGLDNGVVEYKCRRSGEKQEVAITEIVAMLK 569


>gi|167393549|ref|XP_001740621.1| prolyl-tRNA synthetase [Entamoeba dispar SAW760]
 gi|165895194|gb|EDR22941.1| prolyl-tRNA synthetase, putative [Entamoeba dispar SAW760]
          Length = 536

 Score =  156 bits (393), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 69/398 (17%), Positives = 141/398 (35%), Gaps = 55/398 (13%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEI--NTPQVLDQHLWQQSGHWDSYRAN 317
            D SG        + I++ +  +M  +IK    E       V    L ++    + +   
Sbjct: 64  YDISGCYILKPSAYGIWENIQHFMDTRIKKMGVENAYFPCFVSQATLKKEEDELNGFTPE 123

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           +  V  +  +       AL+P +       F + +  +R+LP+++ ++ +V R E S   
Sbjct: 124 VAWVTKSGQSDLQ-EPIALRPTSETIIYPAFKNWISGHRDLPIKVNQWCNVVRWEFS-HP 181

Query: 378 HGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
           +  +R R F   + H  F T+ +   EC +I  L  S+Y+D     ++    ++ E    
Sbjct: 182 YPFIRTREFLWQEGHTAFATQIEAEKECHQILELYASVYEDLLAVPVIRGKKSKGETF-- 239

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
                                              GA+Y    E I+           + 
Sbjct: 240 ----------------------------------PGAYYSLTVECIIPTNGRSVQAATSH 265

Query: 497 QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI--- 553
            +       F   + +  ++K    ++ +  +G   R IG+ I     N  + + P    
Sbjct: 266 HLGQTFSKLFQIEFEDEDNKKQ---LVWQNSWGLSTRSIGVTIMTHGDNKGIIVPPRAAQ 322

Query: 554 -QAIVTTI------TSSAVEYAQEIANLLKSHHLSIETDFRN-ETINYKIREHSIKKIPI 605
            Q ++ T+             A+E+  +L  + +    D        +K  E+ ++ IPI
Sbjct: 323 KQVVIITLHHKGSPNDEMDAKAEELTQILLDNGIRAFADTNEMHKPGWKFSEYEMRGIPI 382

Query: 606 IIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            I  G ++   + + I R  + T  + +  D I  + K
Sbjct: 383 RIELGPRDYEGKKVVIVRRDNGTKSESTWEDLIQNIKK 420


>gi|90408309|ref|ZP_01216474.1| prolyl-tRNA synthetase [Psychromonas sp. CNPT3]
 gi|90310610|gb|EAS38730.1| prolyl-tRNA synthetase [Psychromonas sp. CNPT3]
          Length = 573

 Score =  156 bits (393), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 53/274 (19%), Positives = 103/274 (37%), Gaps = 17/274 (6%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            TQ  L+       ++    H+ + R   +  +A   SG+  W   G ++ + + + +R+
Sbjct: 3   TTQYLLSTQKEAPSDAVIVSHQLMLRAGMIRKLA---SGLYTWLPTGLRVLRKVENIVRQ 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           +++     EI  P V    LW ++G WD Y   +  +K   D     R F L P +    
Sbjct: 60  EMERAGAVEILMPVVQPADLWVETGRWDKYGGELLRLKDRHD-----RDFVLGPTHEEVV 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNE 403
             +    + SY++LP+ L +  + +R+E      G+MR R FT  DA+ F    E +   
Sbjct: 115 TELVRKEINSYKQLPLNLFQIQTKFRDETRPRF-GVMRSREFTMKDAYSFHLEDECLEKT 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              + +    I++  G E   V   +       S      A +    +  + ++     +
Sbjct: 174 YQTMFSAYCRIFERLGLEYRPVIADSGSIGGNSSHEFHVLAPSGEDAIAFSSESDYAANV 233

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ 497
                L       P F+        +  +   + 
Sbjct: 234 EKAEALA------PTFDRPAATLDVKTLETPNVH 261



 Score = 94.5 bits (233), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 33/166 (19%), Positives = 60/166 (36%), Gaps = 11/166 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNL 546
           R  + G I Q+        NA  +N   +     M    +   I R +   IE N   N 
Sbjct: 409 RGIEVGHIFQLGKTYSEAMNASVLNQQGKNQTLTMGCYGI--GISRIVAAAIEQNNDANG 466

Query: 547 PLW---LSPIQAIVTTITSS----AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
            +W   L+P   ++  +         + A+     L++  + +  D R E       +  
Sbjct: 467 IIWNEALAPFSVVIVPMNMKKSHRVADLAERYYAELQAAGIEVLFDDRKERPGVMFADAE 526

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           +  IP ++I GD+      I  +   S   Q V + D I  + ++ 
Sbjct: 527 LIGIPHMLIIGDRSIDNGVIEYKNRKSGEKQDVKIEDVIAFIKEQR 572


>gi|160890380|ref|ZP_02071383.1| hypothetical protein BACUNI_02821 [Bacteroides uniformis ATCC 8492]
 gi|270296935|ref|ZP_06203134.1| prolyl-tRNA synthetase [Bacteroides sp. D20]
 gi|317479089|ref|ZP_07938230.1| prolyl-tRNA synthetase [Bacteroides sp. 4_1_36]
 gi|156860112|gb|EDO53543.1| hypothetical protein BACUNI_02821 [Bacteroides uniformis ATCC 8492]
 gi|270272922|gb|EFA18785.1| prolyl-tRNA synthetase [Bacteroides sp. D20]
 gi|316904745|gb|EFV26558.1| prolyl-tRNA synthetase [Bacteroides sp. 4_1_36]
          Length = 497

 Score =  155 bits (392), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 68/438 (15%), Positives = 158/438 (36%), Gaps = 73/438 (16%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
              E+  + + +L  + DL   +     ++     G+ I++ +   +    K+  +    
Sbjct: 10  KRSENYSQWYNELVVKADLAEQSAVRGCMVI-KPYGYAIWEKMQRQLDDMFKETGHVNAY 68

Query: 296 TPQVLDQHLW-QQSGHWDSYRANMFAVKCA-------------DDTIKDLRTFALKPMNC 341
            P ++ +    +++ H + +      V                D   K      ++P + 
Sbjct: 69  FPLLIPKSFLSREAEHVEGFAKECAVVTHYRLKNDPNGGGVVVDPAAKLEEELIIRPTSE 128

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
                 + + + SYR+LP+   ++ +V+R E        +R   F   + H   T     
Sbjct: 129 TIIWNTYKNWINSYRDLPILCNQWANVFRWEMR--TRLFLRTAEFLWQEGH---TAHATR 183

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E  +    ++++Y +F                                    +      
Sbjct: 184 EEAEEEAVKMLNVYAEF--------------------------------AEKYMAVPVVK 211

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHP 520
            + +      GA      E +++D  G+  Q GT   +  N    F+  +VN  ++  + 
Sbjct: 212 GVKSANERFAGALNTYTIEAMMQD--GKALQSGTSHFLGQNFAKAFDVQFVNKENKLEY- 268

Query: 521 VMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVEYAQE------ 570
             +    +G   R +G +I    ++    LP  L+PIQ ++  I  +A   A+       
Sbjct: 269 --VWATSWGVSTRLMGALIMTHSDDNGLVLPPHLAPIQVVIVPIYKNAEMLAKIDEKVAG 326

Query: 571 IANLLKSHHLSIETDF-RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           I   LKS  +S++ D   N+   +K  ++ +K +P+ ++ G ++    ++ I R  +   
Sbjct: 327 IVAKLKSMGISVKYDNADNKRPGFKFADYEVKGVPVRLVMGGRDLENNTMEIMRRDTLEK 386

Query: 630 QKVS---LLDAIPILTKE 644
           +  S   + + +  L ++
Sbjct: 387 ETRSCEGIEEYVKDLLED 404


>gi|117619295|ref|YP_858106.1| prolyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila ATCC
           7966]
 gi|152074744|sp|A0KPA5|SYP_AERHH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|117560702|gb|ABK37650.1| prolyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila ATCC
           7966]
          Length = 574

 Score =  155 bits (392), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 51/223 (22%), Positives = 96/223 (43%), Gaps = 11/223 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTLKETPSDAEIVSHQLMLRAGMIRKLA---SGMYAWLPSGLRVLKKIENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E++ P V    LWQ+SG WD Y   +  +     T +  R F L P +    
Sbjct: 60  EMNNAGAIEVSMPVVQPAELWQESGRWDDYGPELCRL-----TDRHNRPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
            ++  + + SY++LP+ L +  + +R+E      G+MR R F   DA+ F   +    E 
Sbjct: 115 TSLVRYEVNSYKQLPLNLYQIQTKFRDEVRPRF-GVMRGREFLMKDAYSFHIDKASLIET 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
             ++H    + +   G     V+  T      GS      AE+
Sbjct: 174 YERMHAAYCAAFTRMGLNFRPVQADTGSIGGTGSHEFQVLAES 216



 Score = 89.8 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 28/166 (16%), Positives = 61/166 (36%), Gaps = 13/166 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           + R  + G I Q+         A  +   +E    V +    +G  + R +   IE    
Sbjct: 407 LKRGIEVGHIFQLGTKYSEAMKASVL---NEGGKSVTMEMGCYGIGVSRLVAAAIEQNND 463

Query: 545 N----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                 P  ++P +  +  +    +    E AQ+    LK+  + +  D R E       
Sbjct: 464 QYGIIWPEAIAPFEVAIVPMNMHKSERVAEQAQQFYAELKAAGVDVLFDDRKERPGVMFA 523

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +  +  +P  I+ GD+      +  +   +   Q+V++ + + +L 
Sbjct: 524 DMELLGVPHAIVIGDRGLDNGVVEYKCRRTGEKQEVAISEIVALLK 569


>gi|330466285|ref|YP_004404028.1| prolyl-tRNA synthetase [Verrucosispora maris AB-18-032]
 gi|328809256|gb|AEB43428.1| prolyl-tRNA synthetase [Verrucosispora maris AB-18-032]
          Length = 468

 Score =  155 bits (392), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 66/407 (16%), Positives = 141/407 (34%), Gaps = 55/407 (13%)

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
            R ++ L  +  L         ++     G+ I++ + + M  +IK    E    P  + 
Sbjct: 13  PRWYQDLIAKAKLADNGPVRGTMVI-RPAGYAIWERMQAEMDDRIKAAGAENAYFPLFIP 71

Query: 302 QHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +   + ++ H + +   +  V              ++P +           + SYR+LP+
Sbjct: 72  ESYLKREAEHVEGFSPELAVVTHGGGKQL-AEPVVVRPTSETVIGEFMAKWIDSYRDLPL 130

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFG 419
            L ++ +V R E        +R   F   + H    T+E       KI +          
Sbjct: 131 LLNQWANVVRWELRP--RIFLRTSEFLWQEGHTAHATREDARAYARKILH---------- 178

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
                                 +  E++M  VL          + T      GA      
Sbjct: 179 ----------------------EAYEDLMVNVL---GIPVVVGLKTARERFAGATATYTC 213

Query: 480 EYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           E ++ D  G+  Q GT   +  N    F+  Y ++   + H        +G+  R +G +
Sbjct: 214 EGMMGD--GKALQLGTSHELGQNFAKAFDISYSSAEGGREHA---WTTSWGTSTRMLGGL 268

Query: 539 I----ENFKGNLPLWLSPIQAIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETI- 591
           I    ++    +P  L+P+QA V  +       E A ++ + L+   + +  D R +T  
Sbjct: 269 IMCHGDDNGLRVPPKLAPVQAYVMVVKDGDGVGEAAAKLRDALRDAGVRVALDDRTDTPF 328

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
             +  +  ++  P+ +  G ++ +  +  + R    +     + D +
Sbjct: 329 GRRAVDAELRGYPVRVEVGPRDLAAGNAVVVRRTDGSKAPTPIADVV 375


>gi|228472897|ref|ZP_04057654.1| proline--tRNA ligase [Capnocytophaga gingivalis ATCC 33624]
 gi|228275479|gb|EEK14256.1| proline--tRNA ligase [Capnocytophaga gingivalis ATCC 33624]
          Length = 492

 Score =  155 bits (392), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 67/412 (16%), Positives = 154/412 (37%), Gaps = 74/412 (17%)

Query: 270 RKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCA--- 324
             G+ I++ +   + +  KD  ++    P  + +  ++ +  + + +      V      
Sbjct: 39  PYGYAIWEKMKDILDKMFKDTGHQNAYFPIFVPKSYFEAEEKNAEGFAKECAVVTHYRLK 98

Query: 325 -----------DDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP 373
                      D   K      ++P +       + + ++SYR+LP+ + ++ +V R E 
Sbjct: 99  TDPNQKGKLMVDPEAKLEEELIVRPTSEAIIWNTYKNWIQSYRDLPLLINQWANVVRWEM 158

Query: 374 SGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
                  +R   F   + H    T+E+   E  K++++  +  + +    ++    T  E
Sbjct: 159 R--TRLFLRTAEFLWQEGHTAHATREEAVEEAQKMNDVYATFVEKYMGVPVIRGHKTESE 216

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
           +  G+D  +                                      E +++D  G+  Q
Sbjct: 217 RFAGADDTY------------------------------------CIEALMQD--GKALQ 238

Query: 493 CGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLP 547
            GT   +  N    F   + N      +   +  + +G   R +G +I    ++    LP
Sbjct: 239 AGTSHFLGQNFAKAFEVKFANKEGVLDY---VWASSWGVSTRLMGALIMSHSDDNGLVLP 295

Query: 548 LWLSPIQAIVTTI--TSSAVEYAQE----IANLLKSHHLSIETDFRN-ETINYKIREHSI 600
             L+PIQ ++  I      ++  +E    +   LK  ++S++ D  + +   +K  E+ +
Sbjct: 296 PLLAPIQVVIVPIYKGEEQLQAIRERITPLMKALKERNISVKFDDDDTQKPGFKFHEYEL 355

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           K +P+ +  G ++    +  + R  + T + VS  + I  +  E L  D Q+
Sbjct: 356 KGVPVRLAIGQRDLENNTYEVSRRDTLTKESVSGDNIIAHI--EELLKDIQE 405


>gi|302143811|emb|CBI22672.3| unnamed protein product [Vitis vinifera]
          Length = 448

 Score =  155 bits (392), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 68/371 (18%), Positives = 138/371 (37%), Gaps = 59/371 (15%)

Query: 270 RKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHL-WQQSGHWDSYRANMFAVKCADDT 327
             G+ I++ +  Y+  K K+  +  +  PQ +      +++ H + +   +  V      
Sbjct: 5   PYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGK 64

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
             + +   ++P +      +F   + SYR+LP+ + ++ +V R E        +R   F 
Sbjct: 65  ELEEK-LVVRPTSETIVNHMFTQWIHSYRDLPLMINQWANVTRWEMR--TKPFVRTLEFL 121

Query: 388 QDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
             + H    T E+   E L++      +Y  F                            
Sbjct: 122 WQEGHTAHATPEEAEKEALQMI----DVYTKF---------------------------- 149

Query: 447 IMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSR 505
             +     +    + ++ T      GA      E ++ D   +  Q GT   +  N    
Sbjct: 150 AYEQAAIPVITGRKSKVETF----AGAVRTYTIEAMMGDR--KALQAGTSHNLGQNFSRA 203

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTIT 561
           F   + + + ++ H   I +  +    RFIG +I     +    LP  ++PIQ ++  I 
Sbjct: 204 FGTQFTDENGQRQH---IWQTSWAVSTRFIGGIIMTHGDDAGLMLPPKIAPIQVVIIPIW 260

Query: 562 SSAVEY------AQEIANLLKSHHLSIETDFRN-ETINYKIREHSIKKIPIIIICGDKEA 614
             A E       A  +  +LKS ++ ++ D  +  T  +K     +K +P+ I  G ++ 
Sbjct: 261 KKADEKTGVLNAASSVTEVLKSANIKVKVDDSDQRTPGWKFNFWEMKGVPLRIEIGPRDV 320

Query: 615 SERSIGIRRFG 625
           S  S+ I R  
Sbjct: 321 SSGSVVISRRD 331


>gi|91217375|ref|ZP_01254335.1| prolyl-tRNA synthetase [Psychroflexus torquis ATCC 700755]
 gi|91184483|gb|EAS70866.1| prolyl-tRNA synthetase [Psychroflexus torquis ATCC 700755]
          Length = 492

 Score =  155 bits (392), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 80/440 (18%), Positives = 163/440 (37%), Gaps = 76/440 (17%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
             EE   + + +L  + DL   +     +      G+ I++ + + +  K KD  +E   
Sbjct: 7   RREEDYSKWYNELVVKADLAENSAVRGCMTI-KPYGYAIWEKIQAELDSKFKDTGHENAY 65

Query: 296 TPQVLDQHLWQ-QSGHWDSYRANMFAVKCA--------------DDTIKDLRTFALKPMN 340
            P  + + L++ +  + + +      V                 D   K      ++P +
Sbjct: 66  FPLFVPKSLFEAEEKNAEGFAKECAVVTHYRLQSDPDRPGKLRVDPEAKLDEELVVRPTS 125

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQ 399
                  F   ++SYR+LP+++ ++ +V R E        +R   F   + H    TK +
Sbjct: 126 EAVIWNTFKGWIQSYRDLPLKINQWANVVRWEMR--TRLFLRTTEFLWQEGHTAHATKTE 183

Query: 400 MFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSS 459
              E   I+ L  +  + F    ++  + +  EK  G++  +                  
Sbjct: 184 AVEEAELINTLYANFVEKFMAIPVIQGIKSESEKFAGAEETY------------------ 225

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKC 518
                               E +++D  G+  Q GT   +  N    FN  + +   ++ 
Sbjct: 226 ------------------CIEALMQD--GKALQAGTSHFLGENFAKAFNVKFTSDQGKQE 265

Query: 519 HPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSS------AVEYA 568
           +   +    +G   R +G ++    ++    LP  L+PIQ ++  I  +        E A
Sbjct: 266 Y---VWATSWGVSTRLMGALVMTHSDDNGLVLPPNLAPIQVVIVPIFKNEEQLELVSEKA 322

Query: 569 QEIANLLKSHHLSIETDFRN-ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGST 627
             IAN LKS  + ++ D R      +K  E+ +K IP+ I  G K+  + ++ + R  + 
Sbjct: 323 NLIANDLKSKGVRVKFDNRTTHKPGWKFAEYELKGIPLRIAIGPKDLEKGTVELARRDTL 382

Query: 628 TT---QKVSLLDAIPILTKE 644
           +     +  L   I  L K+
Sbjct: 383 SKTFENQEGLTVVIENLLKD 402


>gi|118486938|gb|ABK95302.1| unknown [Populus trichocarpa]
          Length = 498

 Score =  155 bits (392), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 75/400 (18%), Positives = 141/400 (35%), Gaps = 59/400 (14%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTP----QVLDQHLWQQSGHWDSYR 315
            D SG          I++ +  +   +IK    +I        V    L ++  H + + 
Sbjct: 42  YDISGCYILRPWAMSIWEIMQVFFDAEIKK--MKIKNCYFPLFVSSSVLEKEKDHIEGFA 99

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
             +  V  +  +  ++   A++P +       F+  ++ +R+LP++L ++ +V R E S 
Sbjct: 100 PEVAWVTKSGKSDLEI-PIAIRPTSETVMYPYFSKWIRGHRDLPLKLNQWCNVVRWEFSN 158

Query: 376 SLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
                +R R F   + H  F TK++   E L+I  L   IY++F    I+    +  EK 
Sbjct: 159 PT-PFIRSREFLWQEGHTAFATKQEADEEVLQILELYRRIYEEFLAIPIIKGKKSEMEKF 217

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
            G                                      Y    E  + +  GR  Q  
Sbjct: 218 AGG------------------------------------LYTTSVEAFIPNT-GRGIQGA 240

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP-- 552
           T        ++   F +N  +EK    M  +  +    R IG+M+     +  L L P  
Sbjct: 241 TSHCLGQNFAK--MFEINFENEKGEKGMAWQNSWAYSTRTIGVMVMVHGDDKGLVLPPKV 298

Query: 553 --IQAIVTTI------TSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIREHSIKKI 603
             +Q IV  +      T    +      + L    +  E D+R N +  +K     +K +
Sbjct: 299 SSVQVIVVPVPFKDANTQGIFDACAATVDTLCEAGIRAEADYRENYSPGWKYSHWEMKGV 358

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           P+ I  G K+ +   +   R  +     +S  +    +  
Sbjct: 359 PLRIEIGPKDLANNQVRAVRRDNAAKVDISCDNLAEKVKD 398


>gi|242010725|ref|XP_002426109.1| prolyl-tRNA synthetase, putative [Pediculus humanus corporis]
 gi|212510156|gb|EEB13371.1| prolyl-tRNA synthetase, putative [Pediculus humanus corporis]
          Length = 1305

 Score =  155 bits (392), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 71/402 (17%), Positives = 145/402 (36%), Gaps = 58/402 (14%)

Query: 260  EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ-VLDQHLWQQSGHWDSYRAN 317
             D SG        + +++ + +++  +IK         P  V    L ++  H D +   
Sbjct: 833  YDVSGCYILRPWSFALWEVIRNFLDGEIKSLGVVNCYFPIFVSKSVLEKEKNHIDDFAPE 892

Query: 318  MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
            +  V  + ++       A++P +       F+  ++SYR+LP++L ++ +V R E     
Sbjct: 893  VAWVTKSGESDL-SEHIAIRPTSETVMYPAFSKWVQSYRDLPIKLNQWNNVVRWEFKHP- 950

Query: 378  HGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
               +R R F   + H  F + +    E  +I +L   +Y D     ++    T+ EK  G
Sbjct: 951  QPFLRTREFLWQEGHTAFASYKDAETEVYQILDLYARVYTDLLAIPVVKGWKTKKEKFAG 1010

Query: 437  SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
            SD                                    +    E  +  +        + 
Sbjct: 1011 SD------------------------------------FTTTVEAFIPASGRGIQAATSH 1034

Query: 497  QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI--- 553
             +  N    FN  Y +  +++     +++  +G   R IGIMI     N  L L P    
Sbjct: 1035 HLGQNFSKMFNIVYEDPETQEKK--FVYQNSWGITTRSIGIMIMVHADNKGLVLPPEASS 1092

Query: 554  -QAIVTT--ITSSAVE--------YAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIK 601
             Q ++    IT+S  E          + +     +  + ++ D R+  +  +K     +K
Sbjct: 1093 YQLVIVPCGITASLKEEEKKNLLNACKNLEKDFINSGIRVKLDDRDNYSPGWKFNHWELK 1152

Query: 602  KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             +P+ +  G  +  +  +   R  +    ++ L + IP   K
Sbjct: 1153 GVPLRVELGPTDLEKGQLTAVRRDTGEKIQIQLTNKIPETKK 1194


>gi|50552312|ref|XP_503566.1| YALI0E05027p [Yarrowia lipolytica]
 gi|49649435|emb|CAG79147.1| YALI0E05027p [Yarrowia lipolytica]
          Length = 517

 Score =  155 bits (392), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 69/412 (16%), Positives = 142/412 (34%), Gaps = 61/412 (14%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRAN 317
            D SG        + +++ +  +   KIK    +    P  +   + + +  H + +   
Sbjct: 42  YDVSGCYIMRPPSYFVWEQIQEWFNIKIKKLGVKNAYFPMFVSSRVLEKEKDHVEGFAPE 101

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           +  V  A  +  +    A++P +       +   ++S+R+LP++L ++ SV R E     
Sbjct: 102 VAWVTKAGSSDLE-EPVAIRPTSETVMYPYYAKWVRSHRDLPLKLNQWNSVVRWEFK-HP 159

Query: 378 HGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
              +R R F   + H    T ++  +E + I +    IY +     ++    +  EK  G
Sbjct: 160 QPFLRTREFLWQEGHTAHLTAKEAEDEVMAILDNYEKIYSELLAVPVIKGKKSEKEKFAG 219

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
                                               A +    E  +  + GR  Q  T 
Sbjct: 220 ------------------------------------ALFTTTVEGFIP-STGRGIQGATS 242

Query: 497 QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP---- 552
                  S+     V   +     +   +  +G   R IG+M      N  L L P    
Sbjct: 243 HCLGQNFSKMFDISVEDPNGGADKLFAWQNSWGLSTRVIGVMTMTHSDNKGLVLPPRVAH 302

Query: 553 IQAIVTT----------ITSSAVEYAQEIANLLKSHHLSIETDFRN-ETINYKIREHSIK 601
            QAI+              ++ ++ +  I   L    + + +D R+  +  +K  +  ++
Sbjct: 303 TQAIIIPCGLTAKLAAEKRAAVMDASAAIEKALSEADVRVASDTRDTYSPGWKFSDAELR 362

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA---IPILTKESLPPDC 650
            IP+ I  G ++  +  I   R  +     + + D    +P L  E++  D 
Sbjct: 363 GIPLRIEVGPRDVEQGKIVAVRRDNGEKIVMDIADLATSVPELL-ETIQKDL 413


>gi|328954064|ref|YP_004371398.1| Prolyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
 gi|328454388|gb|AEB10217.1| Prolyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
          Length = 573

 Score =  155 bits (392), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 49/249 (19%), Positives = 94/249 (37%), Gaps = 12/249 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  L        E+E   H+ L R   +  +    SG+  +   G  + + + + +R +
Sbjct: 4   SKMLLPTLKETPAEAETVSHQLLLRAGMIRKL---TSGIYDYLPLGLMVLRKVEAIVREE 60

Query: 287 IK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E+  P V    LWQ+SG W  Y   +   +   D     R +   P +     
Sbjct: 61  MNCAGAQELLLPAVQPAELWQESGRWQIYGKELLRFQDRHD-----RDYCFGPTHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    + SYR+LP+ L +  + +R+E      GL+R R F   D + F   E   ++  
Sbjct: 116 DLVRREVHSYRQLPLNLYQIQTKFRDEIRPRF-GLIRGREFIMKDGYSFDIDEAGADQTY 174

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
           + +++    I+   G     V+  + P     S      AE     V+     +    + 
Sbjct: 175 RAMYDAYTRIFSRCGLRFKTVEADSGPIGGSFSHEFMVLAETGEDVVVSCTACAYAANLE 234

Query: 465 T-GVLLGEG 472
              +L  E 
Sbjct: 235 KAEILPTES 243



 Score = 82.9 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 32/185 (17%), Positives = 73/185 (39%), Gaps = 20/185 (10%)

Query: 476 GPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           G   E++      R  + G +  + +       A +++    + + + +     G   R 
Sbjct: 396 GAALEFL------RGIEVGHVFKLGYKYSKALKATFLDDQGREQY-MFMGCYGIGVS-RI 447

Query: 535 IGIMIENFKG----NLPLWLSPIQAIVTTITSSAVE---YAQEIANLLKSHHLSIETDFR 587
           +   IE          P+ L+P Q ++  I ++ V+    A  +   +++  + +  D R
Sbjct: 448 VAAAIEQNHDLDGIIFPMPLAPFQVLLVPIAANDVDTMAVASRLYQEIRAAGIEVLFDDR 507

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK---- 643
           NE    K ++  +  IP+ ++ G K  ++ +  +R+  S   Q + L   +  L      
Sbjct: 508 NERPGIKFKDGDLLGIPVRVVLGPKTLAQGAAEVRQRRSRAVQLIPLASLVAYLQDHIQA 567

Query: 644 ESLPP 648
           E + P
Sbjct: 568 EMIRP 572


>gi|254427770|ref|ZP_05041477.1| prolyl-tRNA synthetase [Alcanivorax sp. DG881]
 gi|196193939|gb|EDX88898.1| prolyl-tRNA synthetase [Alcanivorax sp. DG881]
          Length = 572

 Score =  155 bits (392), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 51/285 (17%), Positives = 101/285 (35%), Gaps = 17/285 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L        ++    H+ + R   +  +A   SG+  W   G ++ + +   +R 
Sbjct: 3   TSQYLLATVKETPADAVVTSHQLMLRAGMVRKLA---SGLYTWLPSGLRVLRKVEQVIRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +E+  P V    LW++SG   +Y   +  +    +       F L P +    
Sbjct: 60  EMDRAGAQEVLMPVVQPMELWEESGRAPAYGPELLRITDRHNNP-----FCLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP    +  + +R+E      G+MR R F   DA+ F T      + 
Sbjct: 115 TDMVRNELHSYKQLPANFYQIQTKFRDEIRPRF-GIMRSREFIMKDAYSFHTNMDSLADT 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            + +H    +I+   G +   V+  T       S      AE+    +  +  +     +
Sbjct: 174 YQIMHRAYCAIFDRLGLDYRPVEADTGAIGGAASHEFHVLAESGEDDIAFSDGSDYAANV 233

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
                L       P  E     A          +    L ++F+ 
Sbjct: 234 ELAEALA------PAIERPAPGAAMETVDTPNARTIEELVAQFDL 272



 Score = 81.4 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 62/168 (36%), Gaps = 14/168 (8%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFK 543
           +I R  + G I Q+         A  ++ + +    V++    +G  + R +   IE   
Sbjct: 402 SIKRGIEVGHIFQLGTKYSEALGATVLDENGKS---VVMPMGCYGIGVTRVVAAAIEQNN 458

Query: 544 GN----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRN-ETINYK 594
            +     P  ++P Q  +  +    +    E A+ +   L +  + +  D R  E +  K
Sbjct: 459 DDRGIIWPEAIAPFQVALIPVNIKKSPRERELAETLYAELTAAGIEVIFDDREKERLGVK 518

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           + +  +  IP  I+  ++      +  +  G     +V +   +  + 
Sbjct: 519 LADSELIGIPHRIVIAERGMDNGVLEYKGRGDADKTEVPVDVVVAFIK 566


>gi|290957102|ref|YP_003488284.1| class II tRNA synthetase [Streptomyces scabiei 87.22]
 gi|260646628|emb|CBG69725.1| putative class II tRNA synthetase [Streptomyces scabiei 87.22]
          Length = 471

 Score =  155 bits (392), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 65/409 (15%), Positives = 144/409 (35%), Gaps = 53/409 (12%)

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
            R ++ +  + +L         ++     G+ +++ +   M  +IK+   +    P ++ 
Sbjct: 15  PRWYQDVISKAELADNGPVRGTMVI-RPYGYGLWERMQQEMDARIKETGTQNAYFPLLIP 73

Query: 302 QHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           Q     ++ H + +   +  V        +     ++P +     A F+  ++SYR+LP+
Sbjct: 74  QSYLAREAEHVEGFAPELAVVTHGGGKDLE-EPAVVRPTSEMIINASFSKWVQSYRDLPL 132

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
            + ++ +V R E    L   +R   F   + H                       +DF  
Sbjct: 133 LINQWANVVRWELRPRL--FLRTSEFLWQEGHTAHAT--------------YDEARDFAA 176

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
                                   E+ M  VL       +  +        GA      E
Sbjct: 177 HIHRQVY-----------------EDFMVNVLAMDVVPGRKTVKERFA---GALNTLTLE 216

Query: 481 YILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
            ++ D  G+  Q  T   +  N    FN  Y++    +    ++ +  +GS  R IG ++
Sbjct: 217 GMMGD--GKALQMATSHELGQNFARAFNTRYLSKDGSQE---LVWQTSWGSTTRMIGALV 271

Query: 540 ----ENFKGNLPLWLSPIQAIVTTITSSAVEYAQ--EIANLLKSHHLSIETDFRNETI-N 592
               ++    +P  L+  Q +V  I       A+  E+ + LK+  + +  D R +    
Sbjct: 272 MMHGDDHGLRVPPRLAQTQVVVLAIKDDEAVLAKVRELGDRLKAAGVRVRVDDRTDVPFG 331

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            +  +  +K +P+ +  G ++    +  + R  S   + V+    +  L
Sbjct: 332 RRAVDWELKGVPVRVEVGPRDLENGTAMLVRRISGGKEPVAFDALVARL 380


>gi|317484633|ref|ZP_07943536.1| prolyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
 gi|316924107|gb|EFV45290.1| prolyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
          Length = 574

 Score =  155 bits (392), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 48/241 (19%), Positives = 87/241 (36%), Gaps = 11/241 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  +        ++E   H+ L R   +  +    SG+  W   G +      + +R 
Sbjct: 3   WSQWYIPTLKEAPGDAEVISHKLLIRAGMIRKL---TSGIYTWLPLGLRTLNKAANIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +EI  P V    LW++SG W+ Y   +   K      +  R + L P +    
Sbjct: 60  EMDRAGAQEILMPTVQPADLWRESGRWEHYGKELLRFKD-----RHERDYCLGPTHEEVV 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    ++SYR+LP+ L +  + +R+E      GLMR R F   DA+ F   +   +  
Sbjct: 115 TDLIRGEVRSYRQLPMNLYQIQTKFRDEIRPRF-GLMRGREFLMKDAYSFDRDDAGADIS 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             K+      I+     +   V+  +       S      AE     +           I
Sbjct: 174 YKKMFEAYKKIFSRMALQFRPVEADSGSIGGNFSHEFMVLAETGEDTIAYCTGCDWSANI 233

Query: 464 N 464
            
Sbjct: 234 E 234



 Score = 78.7 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 22/152 (14%), Positives = 55/152 (36%), Gaps = 9/152 (5%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE----NFKGNLPLWLSPI 553
           +     +  NA Y++ + ++   +++     G   R +   IE          P  L+P 
Sbjct: 413 LGTKYSTALNAIYLDENGKEQT-IIMGCYGIGVS-RVVAACIEQNNDGDGIAFPPPLAPF 470

Query: 554 QAIVTTITSSAVE---YAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
              +  +     +    A E+ +LL    L +  D R E    K ++  +  +P+ ++ G
Sbjct: 471 DLELLNLDPKNADTAAKADELYDLLTGMGLDVLLDDREERPGVKFKDADLVGLPMQVVVG 530

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            K  +   + ++   +    ++ +        
Sbjct: 531 GKGLARGIVEVKNRKTGEKGELPVEGFAEAFA 562


>gi|257053756|ref|YP_003131589.1| prolyl-tRNA synthetase [Halorhabdus utahensis DSM 12940]
 gi|256692519|gb|ACV12856.1| prolyl-tRNA synthetase [Halorhabdus utahensis DSM 12940]
          Length = 484

 Score =  155 bits (392), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 64/413 (15%), Positives = 136/413 (32%), Gaps = 56/413 (13%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
             + +L ++  L   A  G  ++    +G+ I++ L +++    K    +    P  + +
Sbjct: 19  EWYAELVQKAGLADYAPMGGFIVT-RPRGYAIWERLKNHLDGWFKQTGVQNAYFPMFIPE 77

Query: 303 H-LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             L ++    + +   +  V        + +  A++P +            +S+R+LP+R
Sbjct: 78  SYLEKEKDIVEGFDPEVAWVTKGGYDELEEQ-LAVRPTSESIITPFLAQWTRSHRDLPIR 136

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           + ++ SV R E +       R + F   + H     E+           +  +    G  
Sbjct: 137 VNQWCSVVRWEAT-ETKPFFRTKEFLWQEGHTAHHDEEDA---------VEEMETRLGQY 186

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
           K + +         G     D                             GA      E 
Sbjct: 187 KRLYEDVLAMPVLSGRKPDHDKF--------------------------PGAHTTTTVEA 220

Query: 482 ILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           ++ D  G+  Q GT      +    ++  YV+   E       H   +G   R +G +  
Sbjct: 221 LMPD--GKSVQGGTSHYLGTSFAEAYDVTYVDEDEEVKTA---HTTSWGLSWRALGALFM 275

Query: 541 NFKGNLPLWLSPI----QAIVTTI-----TSSAVEYAQEIANLLKSHHLSIETDFRNET- 590
               +  L L P     Q ++  I         + YA+++   L+   + +E D R+   
Sbjct: 276 THSDDQGLVLPPTLAETQVVIVPIWDEDSKDDVLAYAEDVEADLEDAGVRVELDDRDHRN 335

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             +K  EH +  +P+ I  G  E ++  + +          V   +    +  
Sbjct: 336 PGFKYNEHELNGVPLRIEIGSYEVADDELTLVHRPDGEEITVERDNVAETVED 388


>gi|168057512|ref|XP_001780758.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162667776|gb|EDQ54397.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 536

 Score =  155 bits (392), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 67/443 (15%), Positives = 160/443 (36%), Gaps = 73/443 (16%)

Query: 228 QQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI 287
           ++E    +    +   + +  +    +L         ++     G+ I++ + S++  + 
Sbjct: 52  KKEKNLKVTPRSQDFSKWYLDVIDAAELADYGPVRGTMVI-RPYGYAIWEFIQSWLDARF 110

Query: 288 KD-DYEEINTPQVLDQHL-WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           K+  +  +  PQ++      +++ H + +   +  V        + R   ++P +     
Sbjct: 111 KETGHSNMYFPQLIPYSFIEKEASHVEGFSPELALVTIGGGKELEER-LVVRPTSETIVN 169

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT-KEQMFNEC 404
            +F   ++SYR+LP+ + ++ +V+R E        +R   F   + H   T  E+   E 
Sbjct: 170 HMFAQWVQSYRDLPLLINQWANVHRWEMR--TRPFVRTLEFLWQEGHTAHTSPEEAEEEA 227

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
           L++  +                                  E         +    + R+ 
Sbjct: 228 LRMIEVYR--------------------------------EFAYSQAAIPVVVGRKSRLE 255

Query: 465 TGVLLGEGAFYGPKFEYILKDAIG--RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPV 521
           T        F G    Y ++  +G  R  Q GT   +  N    FN  Y +   +  +  
Sbjct: 256 T--------FAGASITYTIEAMMGDRRALQAGTSHNLGQNFAKAFNTQYTDEKGDLQY-- 305

Query: 522 MIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTI------TSSAVEYAQEI 571
            + +  +G   R +G +I     +     P  ++P+Q ++  I       +  +  A++ 
Sbjct: 306 -VWQTSWGMSTRMVGGIIMTHGDDTGLLFPPRVAPLQVVIVPIWKKDEQKADVMAAAEKT 364

Query: 572 ANLLKSHHLSIETDFRN-ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG----- 625
             +LK   L ++ D  + +T  +K     +K +PI I  G ++ +E  + + R       
Sbjct: 365 EKILKGAGLRVKLDVSDQKTAGFKFNFWEMKGVPIRIEIGPRDVAENVLVVARRDVPGKD 424

Query: 626 ----STTTQKVSLLDAIPILTKE 644
                 + ++  L++ +    +E
Sbjct: 425 GKQFGVSMEEKPLVEFVKNRLEE 447


>gi|298245368|ref|ZP_06969174.1| prolyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
 gi|297552849|gb|EFH86714.1| prolyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
          Length = 483

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 65/430 (15%), Positives = 157/430 (36%), Gaps = 58/430 (13%)

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR 284
            + +++  + L   E+     + ++ R+ +L   A     +I     G+ +++ + S + 
Sbjct: 1   MSQKEKFVEELVDQEDDFSAWYNQIVRKAELADYAPVRGCMII-RPYGYALWEHIQSLLD 59

Query: 285 RKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
           ++ KD        P ++ +   + ++ H + +   +  V        +    A++P +  
Sbjct: 60  QRFKDTGVMNAYFPLLIPRSFLEKEAEHVEGFAPELAWVTRGGGEELE-EPLAIRPTSET 118

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN 402
                ++  ++SYR+LP+ + ++ +V R E        +R   F   + H   T  +   
Sbjct: 119 IIGHSYSRWVQSYRDLPLLINQWNNVMRWEKR--TTLFLRTSEFLWQEGH---TAHRTLE 173

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
           E  +   +++ +Y+DF                                  +         
Sbjct: 174 EAEERTRMMLEVYRDF--------------------------------AENEAAIPVIPG 201

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPV 521
             T      GA      E ++ D  G+  Q  T   +  N    F+  ++++  E+ +  
Sbjct: 202 RKTENEKFAGALRTYSIEALMGD--GKALQSATSHNLGQNFAKSFDIQFLDADGERKY-- 257

Query: 522 MIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTITSSAVEYA------QEI 571
                 +G   R IG +I          LP  L+P Q ++  I     + A      + +
Sbjct: 258 -CATTSWGLSTRMIGGIIMVHGDPSGLILPPRLAPFQVVIVPIWRKDQDRAVVFEAVERL 316

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
             +LK   + ++ D  + T  +K  E  ++ +P+ +  G ++    ++ +      + + 
Sbjct: 317 QKMLKGK-VRVKVDDSDNTPGWKYNEWEMRGVPLRLEIGPRDVQNNNVVLVSRLDRSKEF 375

Query: 632 VSLLDAIPIL 641
           VS+ +    L
Sbjct: 376 VSIDNLETRL 385


>gi|110597728|ref|ZP_01386012.1| prolyl-tRNA synthetase [Chlorobium ferrooxidans DSM 13031]
 gi|110340635|gb|EAT59115.1| prolyl-tRNA synthetase [Chlorobium ferrooxidans DSM 13031]
          Length = 481

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 68/422 (16%), Positives = 151/422 (35%), Gaps = 58/422 (13%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
             E   + +  L R   L   ++    ++     G+ I++ + + + R  K+  +     
Sbjct: 8   RTEDYSQWYIDLVRSAKLADYSDVRGCMVI-RPNGYAIWEKMQAALDRMFKETGHVNAYF 66

Query: 297 PQVLDQHL-WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P  + +    +++ H + +      V              ++P +     + +   ++SY
Sbjct: 67  PLFIPESFIAKEAEHIEGFAPECAVVTHGGGEEL-AEKLYVRPTSETIIWSSYKKWIQSY 125

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISI 414
           R+LP+ + ++ +V R E        +R   F   + H    T E+   E +++ N+  + 
Sbjct: 126 RDLPILINQWANVVRWEMR--TRLFLRTTEFLWQEGHTAHATPEESQEEVMRMINVYKTF 183

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            +++    +++   T  EK  G+   +                                 
Sbjct: 184 AEEYMAMPVIMGKKTDSEKFAGAVETY--------------------------------- 210

Query: 475 YGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
                E +++D   +  Q GT   +  N    F+  +    S   +   +    +G   R
Sbjct: 211 ---CIEAMMQDT--KALQAGTSHNLGQNFAKAFDCQFQTKESTLDY---VWATSWGVSTR 262

Query: 534 FIGIMIENFKGNLPLWLSP----IQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETD 585
            IG +I     +  L L P     Q ++  I     ++ +  A+ IA+ LK   +    D
Sbjct: 263 LIGALIMAHSDDRGLVLPPKLATRQVVIIPILRGDKAAVLAKAEAIADSLKKSGIPSFVD 322

Query: 586 FRN-ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
                +  +K  E+ ++ IPI I  G ++         R  +    +++L D +P+   E
Sbjct: 323 GSEQNSPGWKFAEYELQGIPIRIELGPRDIENNICIAARRDTLEKTELALDDTLPLKISE 382

Query: 645 SL 646
            L
Sbjct: 383 IL 384


>gi|255545202|ref|XP_002513662.1| prolyl-tRNA synthetase, putative [Ricinus communis]
 gi|223547570|gb|EEF49065.1| prolyl-tRNA synthetase, putative [Ricinus communis]
          Length = 548

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 66/414 (15%), Positives = 146/414 (35%), Gaps = 60/414 (14%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++    + +    E     +  +    +L         ++     G+ I++ +  Y+  K
Sbjct: 63  SRINQDRAVTPRSEDFNAWYLDVIANAELADYGPVRGTMVI-RPYGYAIWEAIQDYLNVK 121

Query: 287 IKD-DYEEINTPQVLDQHL-WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
            K+  +  +  PQ +      +++ H + +   +  V        + +   ++P +    
Sbjct: 122 FKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEK-LVVRPTSETIV 180

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNE 403
             +F   + SYR+LP+ + ++ +V R E        +R   F   + H    T E+   E
Sbjct: 181 NHMFTQWIHSYRDLPLMVNQWANVTRWEMR--TKPFVRTLEFLWQEGHTAHATPEEAEKE 238

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            L++      +Y  F                              +     +    + ++
Sbjct: 239 ALQMI----DVYTKF----------------------------AYEQAAIPVIAGRKSKV 266

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVM 522
            T      GA      E ++ D   +  Q GT   +  N    F   + + + ++ H   
Sbjct: 267 ETF----AGAVRTYTIEAMMGDR--KALQAGTSHNLGQNFSRAFGTQFTDENGQRQH--- 317

Query: 523 IHRAVFGSIERFIGIMIENFKGNL----PLWLSPIQAIVTTITSSAVEY------AQEIA 572
           + +  +    RF+G +I     +     P  ++PIQ ++  I     E       A  + 
Sbjct: 318 VWQTSWAISTRFVGGIIMTHGDDTGLMLPPKIAPIQVVIVPIWKKDTEKAGVLNAASSVR 377

Query: 573 NLLKSHHLSIETDFRN-ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
            +L+S  L ++ D  +  T  +K     +K +P+ I  G ++ S  S+ I R  
Sbjct: 378 EVLQSSGLKVKLDDSDQRTPGWKFNFWEMKGVPLRIEIGPRDVSSGSVVISRRD 431


>gi|313127085|ref|YP_004037355.1| prolyl-tRNA synthetase [Halogeometricum borinquense DSM 11551]
 gi|312293450|gb|ADQ67910.1| prolyl-tRNA synthetase [Halogeometricum borinquense DSM 11551]
          Length = 488

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 64/389 (16%), Positives = 140/389 (35%), Gaps = 57/389 (14%)

Query: 270 RKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDT 327
            + + +++ +  ++  + KD   +    P  + +   + +    + +   +  V  A   
Sbjct: 46  PRAYALWERVQGFLDARFKDTGVQNAYFPLFIPESYLEREKDIVEGFDPEVAWVTQAGHD 105

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
             + R  A++P +        +  ++S+R+LP+R+ ++ SV R E +       R + F 
Sbjct: 106 ELEER-LAVRPTSESIIAPYMSQWVRSHRDLPLRVNQWASVVRWEAT-ETKPFFRTKEFL 163

Query: 388 QDDAHVFCTKEQMFNE-CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
             + H      +   +  +   +   S+Y+D                          A  
Sbjct: 164 WQEGHTAHATAEAAWDETMTRLDQYESVYEDL------------------------LAIP 199

Query: 447 IMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSR 505
           +++G                     GA      E ++ D  G+  Q  T   +  +    
Sbjct: 200 VLRGA------------KPEHDKFPGANTTTTVEALMPD--GKSVQGATSHDLGTSFAEA 245

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL----SPIQAIVTTI- 560
           F+  Y +   E     + H   +G   R +G +I     +  L L    +P Q ++  I 
Sbjct: 246 FDLTYTDEDEESQ---VAHTTSWGLSWRALGALIMTHSDDQGLVLPHTVAPEQVVIVPIW 302

Query: 561 ----TSSAVEYAQEIANLLKSHHLSIETDFRNET-INYKIREHSIKKIPIIIICGDKEAS 615
                   +EYA+ I+  L+   + +E D R+E    +K  E  +K +P+    G  E  
Sbjct: 303 QADTQEKVLEYAESISEELEDAGIRVELDDRDERNPGFKFNEWELKGVPVRFEIGPNEVD 362

Query: 616 ERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  + +       T++V+  D    + +E
Sbjct: 363 DDVVTVVHRPDGETKEVAREDIAETVREE 391


>gi|149378080|ref|ZP_01895802.1| prolyl-tRNA synthetase [Marinobacter algicola DG893]
 gi|149357649|gb|EDM46149.1| prolyl-tRNA synthetase [Marinobacter algicola DG893]
          Length = 577

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 47/249 (18%), Positives = 95/249 (38%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  +        ++E   H+ + R   +  +A   SG+  W   G ++ + +   +R 
Sbjct: 3   ASRYLIATQKETPADAEIISHQMMLRAGMIRKLA---SGLYSWLPMGLRVLRKVERIVRE 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +E+  P V    LWQ+SG W+ Y   +  +       +  R F   P +    
Sbjct: 60  EMDKSGAQEVLMPAVQPAELWQESGRWEQYGGELLRMND-----RHGRDFCFGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNE 403
             +  + LKSY+ELP    +  + +R+E      G+MR R F   DA+ F    E + + 
Sbjct: 115 TDLIRNELKSYKELPANFYQIQTKFRDERRPRF-GVMRAREFIMKDAYSFHVNAESLNDT 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +H    +I+   G +   V+  +       S      A +    ++ +  +     I
Sbjct: 174 YQVMHRTYCAIFDRLGLDYRPVEADSGAIGGSASHEFHVLASSGEDAIVFSTDSDYAANI 233

Query: 464 NTGVLLGEG 472
                +   
Sbjct: 234 EKAEAVAPA 242



 Score = 82.9 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 60/163 (36%), Gaps = 9/163 (5%)

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGN 545
           I R  + G I    N  S+     V   + K   + +     G   R +   IE N    
Sbjct: 407 IRRGIEVGHIFKLGNKYSKAMNATVLDENGKSAILEMGCYGIGVS-RIVASSIEQNHDDK 465

Query: 546 LPLWL---SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
             +W    +P +  + T+    + + +   +++   L+     +  D RNE    K  + 
Sbjct: 466 GIIWPDAIAPFEVAIVTLNGHKSPAVMAAGEKLYEQLRQAGFDVLLDDRNERPGVKFADM 525

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            +  IP   +  ++  +  ++  +       Q + L +A+P L
Sbjct: 526 ELIGIPHRFVVSERGLAAETLEYKGRRDEDKQDIPLAEALPFL 568


>gi|254483545|ref|ZP_05096771.1| prolyl-tRNA synthetase [marine gamma proteobacterium HTCC2148]
 gi|214036202|gb|EEB76883.1| prolyl-tRNA synthetase [marine gamma proteobacterium HTCC2148]
          Length = 580

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 45/252 (17%), Positives = 97/252 (38%), Gaps = 11/252 (4%)

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISY 282
           T   +   +        ++E   H+ + R   +  +A    G+  W   G ++ + + + 
Sbjct: 10  TMRTSNFLIATQKETPADAEVISHQLMLRAGLIRKLAA---GLYSWLPLGLRVLRKVENV 66

Query: 283 MRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           +R ++     +E++ P V    LWQ+SG W+ Y + +  ++      +  R F L P + 
Sbjct: 67  VREEMNAAGAQEVSMPVVQPAELWQESGRWEQYGSELLRIQD-----RHQRDFCLGPTHE 121

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
                +  + +KSY++LP+ + +  +  R+E      G+MR R F   DA+ F   +   
Sbjct: 122 EVITDLIRNEVKSYKQLPLNMYQIQTKVRDEIRPRF-GIMRSREFLMKDAYSFHASQASL 180

Query: 402 NECLK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQ 460
            +  + +H     ++   G +   V   T       S      A +    +  +  +   
Sbjct: 181 EDTYQIMHGAYTKVFTRLGLDFRPVIADTGSIGGSASHEFHVLANSGEDDIAFSDSSDYA 240

Query: 461 DRINTGVLLGEG 472
             I     +   
Sbjct: 241 ANIEMAEAVSPA 252



 Score = 94.5 bits (233), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 34/168 (20%), Positives = 66/168 (39%), Gaps = 13/168 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           I R  + G I Q+         A  +N + +    V +    +G  + R +   IE N  
Sbjct: 413 IKRGIEVGHIFQLGTKYSEAMKAEVLNENGKN---VTMTMGCYGIGVSRVVAAAIEQNHD 469

Query: 544 GNLPLW---LSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
               +W   ++P Q  +  +    + +    A+ +   L+S  + +  D RNE    K  
Sbjct: 470 DKGIIWPEAMAPFQLAIVPLNMQKSEAVANCAEALYANLQSVGVDVLLDDRNERPGVKFA 529

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  +  IP  I+ GD+  +E  I  +      +Q +   D +  L ++
Sbjct: 530 DMELIGIPHRIVIGDRALAEGQIEYKGRRDEDSQLIPQEDIVSFLQEQ 577


>gi|226942102|ref|YP_002797176.1| prolyl-tRNA synthetase [Laribacter hongkongensis HLHK9]
 gi|226717029|gb|ACO76167.1| Syp [Laribacter hongkongensis HLHK9]
          Length = 569

 Score =  155 bits (391), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 46/217 (21%), Positives = 89/217 (41%), Gaps = 11/217 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       E+E   H+ + R   +  ++   SG+  W   G ++ + + + +R 
Sbjct: 3   ASQYFLSTLKEAPNEAELPSHKLMLRAGMIKRLS---SGLYTWMPLGLRVLRKVEAIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P +    LWQ+SG W+ Y   +  VK      +  R F + P +    
Sbjct: 60  EMNRAGAIELLMPAIQPAELWQESGRWEFYGKELLRVKD-----RHERDFCVGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
                  +KSY++LP+   +  + +R+E      G+MR R F   DA+ F T  + +   
Sbjct: 115 TDAVRKEVKSYKQLPLNFYQIQTKFRDEVRPRF-GVMRAREFVMKDAYSFHTDFDSLKAT 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
              +++    ++   G +   V   T      GS   
Sbjct: 174 YQGMYDAYCRVFTRLGLDFRPVAADTGSIGGTGSHEF 210



 Score = 77.5 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 25/179 (13%), Positives = 59/179 (32%), Gaps = 19/179 (10%)

Query: 484 KDAIGRDWQCGTI------QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIG 536
            D  G    C  I      Q+        +  +++   ++    ++    +G  + R + 
Sbjct: 394 PDGQGEIRLCRGIEVGHVFQLRKKYAEAMDCGFLDQDGKRQ---IMEMGCYGIGVSRVVA 450

Query: 537 IMIENFKGNLPL----WLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRN 588
             IE       +     ++P    +  +    + S    A  +   L +  + +  D R+
Sbjct: 451 AAIEQGFDERGIIFTDAMAPFTVSIVPMGYRRSESVKAAADALYAELVAAGVDVLLDDRD 510

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLP 647
           E     + +  +  IP  ++ GD+   E  +  +    T    V + + I    +  L 
Sbjct: 511 ERPGVLLADSELIGIPHRVVIGDRGLKEGKVEYQGRRETEATSVEVAE-IAAFVRSKLA 568


>gi|83746821|ref|ZP_00943869.1| Prolyl-tRNA synthetase [Ralstonia solanacearum UW551]
 gi|83726590|gb|EAP73720.1| Prolyl-tRNA synthetase [Ralstonia solanacearum UW551]
          Length = 626

 Score =  155 bits (391), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 57/301 (18%), Positives = 112/301 (37%), Gaps = 13/301 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       ++E   H+ + R   +  +   G+G+  +   G +  + +   +R 
Sbjct: 55  ASQFFISTLKEAPADAEIVSHKLMMRAGMIKKL---GAGIYTYMPVGLRAIRKVEQIVRE 111

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LWQ++G WD     +  VK      +  R   ++P +    
Sbjct: 112 EMNAAGAVEMLMPVVQPGELWQETGRWDKMGEELMRVKD-----RHERDLVIQPTSEEVV 166

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
             +    ++SY+++PV   +  + +R+E      G+MR R FT  DA+ F    E M   
Sbjct: 167 TDIARTEIRSYKQMPVNFYQIQTKFRDERRPRF-GIMRGREFTMKDAYSFDRDVEGMKVS 225

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             K+ +    I++ FG     V          GS      AE     ++ + ++     I
Sbjct: 226 YQKMFDAYTRIFQRFGLAFRAVAADNGAIGGSGSHEFHVIAETGEDAIVYSPESDYAANI 285

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI--QVDFNLPSRFNAFYVNSHSEKCHPV 521
                L   A   P  E + K       +C  +  Q+   L     +  +    +   P 
Sbjct: 286 EAAEALVPAAPRSPAAEPLAKTPTPGRAKCEAVAEQLGIALQRTVKSIVLAKEVDGGEPQ 345

Query: 522 M 522
           +
Sbjct: 346 I 346



 Score = 76.4 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 21/148 (14%), Positives = 56/148 (37%), Gaps = 11/148 (7%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G +  +        +A +++ +  K  P+++     G I R +G  IE       
Sbjct: 461 RGIEVGHVFMLGTRYSESMSATFLDENG-KTQPMVMGCYGIG-ITRILGAAIEQNYDARG 518

Query: 546 --LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
              P+ ++P + ++  +    + +    A  +   L +  + +  D R E       +  
Sbjct: 519 IIWPVSIAPFEVVICPVGYDRSEAVRAEADRLHAELAAAGIDVILDDRGERPGVMFADWE 578

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGST 627
           +  +P  ++ G++   E  + ++     
Sbjct: 579 LIGVPFRVVVGERGLKEGKLELQGRRDE 606


>gi|269986191|gb|EEZ92503.1| prolyl-tRNA synthetase [Candidatus Parvarchaeum acidiphilum
           ARMAN-4]
          Length = 477

 Score =  155 bits (391), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 71/411 (17%), Positives = 156/411 (37%), Gaps = 56/411 (13%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
            + ++  + ++   +    G   +   G+++++  + Y+  K K    +    P ++ + 
Sbjct: 16  WYNQVVIKSEMADFSIVK-GFAVYRPYGYEMWERSVEYLDGKFKSIGVKNAYFPLLIPES 74

Query: 304 LW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
           +  ++  H + +   +  V    DT  D R  A++P +       ++  +KSYR+LP+ +
Sbjct: 75  VLSKEKEHIEGFNPEVAWVTMGGDTKLDER-LAIRPTSETIMYDSYSKWIKSYRDLPLLI 133

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISIYKDFGFE 421
            ++ ++ R E        +R R     + H VF T+E+       I N      ++    
Sbjct: 134 NQWNTMVRWETK-ETRLFLRGREVLWQEGHCVFKTEEEADKNARDILNFYKDFLENMLAV 192

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            ++    ++ EK  G                                    A      E 
Sbjct: 193 PVIAGKKSQSEKFAG------------------------------------AVTTYTVEA 216

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
           +L +            +  N    F+  +++  +E  +P    +  +G   R IGIM+  
Sbjct: 217 VLSNNFMSQAATSH-YLGQNFAKPFDIKFLDEKNELQYPF---QTSWGISMRSIGIMLLV 272

Query: 542 FKGNLPLWL----SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNE-TIN 592
              +  L L    +P Q ++  I        +EY  +I + LK   + +  D R + +  
Sbjct: 273 HGDDKGLVLSPHVAPYQCVIIPIIKEEKDKVLEYCGQIESRLKEIGIRVLLDSREDYSPG 332

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +K+ E+ +K +P+ I  G +E   R+I ++   +     VS  + I  + +
Sbjct: 333 WKLNEYDLKGVPLKIQIGKRELESRNISLKTRINNVQSIVSFNE-IEQVKE 382


>gi|212550458|ref|YP_002308775.1| prolyl-tRNA synthetase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
 gi|259511574|sp|B6YQ92|SYP_AZOPC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|212548696|dbj|BAG83364.1| prolyl-tRNA synthetase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
          Length = 493

 Score =  155 bits (391), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 67/394 (17%), Positives = 143/394 (36%), Gaps = 71/394 (18%)

Query: 270 RKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCA--- 324
             G+ I++ +   +    K+  +     P  + +    +++ H + +      V      
Sbjct: 42  PYGYAIWEKIQRQLDEMFKETGHVNAYFPLFIPKSFLNREASHIEGFAKECAIVTHYRLK 101

Query: 325 ----------DDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
                     D   K      ++P +       +   + SYR+LP+ + ++ +V R E  
Sbjct: 102 NDPIGKGIIVDSEAKLEEELIIRPTSESIIWNTYKKWIHSYRDLPILINQWANVVRWEMR 161

Query: 375 GSLHGLMRVRGFTQDDAHVFCT-KEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
                 +R   F   + H   T KE+   E LKI ++  +  + +    +   + T  E+
Sbjct: 162 --TRLFLRTAEFLWQEGHTAHTSKEEAIEETLKILDIYANFVEQYMAIPVTKGVKTPCER 219

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
             G                                    A      E +++D  G+  Q 
Sbjct: 220 FAG------------------------------------ATDTYCIETLMQD--GKALQA 241

Query: 494 GTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPL 548
           GT   +  N    F+  ++N   ++ +   +    +G   R +G +I    ++    LP 
Sbjct: 242 GTSHFLGQNFAKAFDVQFLNKKGKREY---VWATSWGVSTRLMGALIMMHSDDNGLVLPP 298

Query: 549 WLSPIQAIVTTIT------SSAVEYAQEIANLLKSHHLSIETD-FRNETINYKIREHSIK 601
            L+P Q ++  ++          E A  I N  K+  ++++ D   N+   +K  E+ +K
Sbjct: 299 KLAPCQIVIIPVSKDRTSLEDINEKATNIINDFKNLDINVKYDNTDNKKPGWKFAEYELK 358

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
            IPI +  G ++    +I + R  + T + +S+ 
Sbjct: 359 GIPIRLTLGTRDLENGTIEVSRRDTLTKETISIN 392


>gi|223041831|ref|ZP_03612021.1| prolyl-tRNA synthetase [Actinobacillus minor 202]
 gi|223017400|gb|EEF15821.1| prolyl-tRNA synthetase [Actinobacillus minor 202]
          Length = 317

 Score =  155 bits (391), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 64/329 (19%), Positives = 118/329 (35%), Gaps = 17/329 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q   +       +++   H+ + R   +  +A   SG+  W   G K+ + + + +R 
Sbjct: 3   TSQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMA---SGLYNWLPTGIKVLKKVENIIRE 59

Query: 286 KIKDD-YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LWQ+SG W+ Y A +       +     R F L P +    
Sbjct: 60  EMNKGGAIEVLMPVVQPAELWQESGRWNDYGAELLRFNDRGN-----RDFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP+ L +  + +R+E      G+MR R F   DA+ F   +    E 
Sbjct: 115 TDLVRREVSSYKQLPLNLYQIQTKFRDEVRPRF-GVMRSREFIMKDAYSFHVDKASLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++ +  +I+   G +   V+  T       S      A +    V+ + ++     I
Sbjct: 174 YDVMYQVYSNIFTRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVFSTESDFAANI 233

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
                +  G    P  E  L D          +   FNLP       +          ++
Sbjct: 234 ELAEAVAVGERQAPTAEMQLVDT-PNAKTINELVEQFNLPIEKTVKTLIVKGATEEQPLV 292

Query: 524 HRAVFGSIERFIGIMIENFKGNLPLWLSP 552
              + G  E     + E      PL   P
Sbjct: 293 ALVIRGDHE-----LNEIKAQKHPLVADP 316


>gi|302865885|ref|YP_003834522.1| prolyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029]
 gi|302568744|gb|ADL44946.1| prolyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029]
          Length = 468

 Score =  155 bits (391), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 61/406 (15%), Positives = 138/406 (33%), Gaps = 53/406 (13%)

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
            R ++ L  +  L         ++     G+ I++ + + M  +IK    E    P  + 
Sbjct: 13  PRWYQDLIAKAKLADNGPVRGTMVI-RPAGYAIWERMQAEMDARIKAAGAENAYFPLFIP 71

Query: 302 QHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +   + ++ H + +   +  V              ++P +           + SYR+LP+
Sbjct: 72  ESYLKREAEHVEGFSPELAVVTHGGGKQL-AEPVVVRPTSETVIGEFMAKWIDSYRDLPL 130

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
            L ++ +V R E        +R   F   + H      +      +              
Sbjct: 131 LLNQWANVVRWELRP--RIFLRTSEFLWQEGHTAHATREDARAYARRI------------ 176

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
                              L +  E++M  VL          + T      GA      E
Sbjct: 177 -------------------LHEAYEDLMVNVL---GIPVVVGLKTARERFAGATATYTCE 214

Query: 481 YILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
            ++ D  G+  Q GT   +  N    F+  Y ++   + H        +G+  R +G +I
Sbjct: 215 GMMGD--GKALQLGTSHELGQNFAKAFDISYSSAEGGREHA---WTTSWGTSTRMLGGLI 269

Query: 540 ----ENFKGNLPLWLSPIQ--AIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET-IN 592
               ++    +P  L+P+Q   ++        E A+++ + L+   + +  D R +T   
Sbjct: 270 MCHGDDNGLRVPPKLAPVQAYVMIVKDGEGVAEAARKLHDALRDAGVRVALDDRTDTAFG 329

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
            +  +  ++  P+ +  G ++ +  +  + R    +     + D +
Sbjct: 330 RRAVDAELRGYPVRVEVGPRDLAAGNAVVVRRTDGSKAPTPVADVV 375


>gi|119946895|ref|YP_944575.1| prolyl-tRNA synthetase [Psychromonas ingrahamii 37]
 gi|152112944|sp|A1SZR1|SYP_PSYIN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|119865499|gb|ABM04976.1| prolyl-tRNA synthetase [Psychromonas ingrahamii 37]
          Length = 571

 Score =  155 bits (391), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 50/249 (20%), Positives = 97/249 (38%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            T   L+       ++    H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TTNYLLSTQKEAPSDAVIVSHQLMLRAGMIRKLA---SGLYTWLPTGLRVLRKVETIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           +++     E+  P V    LW ++G WD Y   +  +K      +  R F L P +    
Sbjct: 60  EMERAGGVEVLMPIVQPADLWLETGRWDQYGGELLRIKD-----RHTRDFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP+ L +  + +R+E      G+MR R FT  DA+ F   +    + 
Sbjct: 115 TELVRKEVNSYKQLPLNLFQIQTKFRDETRPRF-GVMRAREFTMKDAYSFHMDQACLEKT 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             K+ +    I+   G E   V   T       S      A++    ++ + ++     I
Sbjct: 174 YQKMFDAYCRIFDRLGLEYRPVIADTGSIGGSASHEFHVLAQSGEDAIVFSTESDYAANI 233

Query: 464 NTGVLLGEG 472
                L   
Sbjct: 234 EKAEALAPS 242



 Score = 85.6 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 64/165 (38%), Gaps = 11/165 (6%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGNL 546
           R  + G I    +  ++  A      +++    ++    +G  I R +   IE N   N 
Sbjct: 407 RGIEVGHIFQLGDTYTK--AMNAGVLNQQGKNQILTMGCYGIGISRIVAAAIEQNNDKNG 464

Query: 547 PLW---LSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
            +W   L+P   ++  +    +    E A++    L++  + +  D R E       +  
Sbjct: 465 IIWNNTLAPFSVVIVPMNMHKSHRVAELAEKYYAELQAAGIEVLFDDRKERPGIMFADAE 524

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  IP  ++ GD+      I  +   S   Q+V++ + I  +  +
Sbjct: 525 LMGIPHTLVIGDRSLDNGVIEYKDRLSGVKQEVAIDEVINFIKAQ 569


>gi|288940948|ref|YP_003443188.1| prolyl-tRNA synthetase [Allochromatium vinosum DSM 180]
 gi|288896320|gb|ADC62156.1| prolyl-tRNA synthetase [Allochromatium vinosum DSM 180]
          Length = 572

 Score =  154 bits (390), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 48/249 (19%), Positives = 92/249 (36%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  L        ++E   HR + R   +  +A    G+  W   G ++ + +   +R 
Sbjct: 3   TSEFPLQTIKETPADAEIASHRLMLRAGLIRKLAA---GLYTWLPLGLRVLRRVERIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E++ P V    LWQ+SG W+ Y   +   K      +  R F   P +    
Sbjct: 60  EMDRAGALEVSMPAVQPAELWQESGRWEQYGPELLRFKD-----RHQREFCFGPTHEEII 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + LKSY++LP+   +  + +R+E      G+MR R F   DA+ F   +    E 
Sbjct: 115 TELARNELKSYKQLPINFYQIQTKFRDEIRPRF-GVMRAREFLMKDAYSFHLDDASLAET 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             ++H     I+   G +   V   T       S      A +    +  +  +     +
Sbjct: 174 YQRMHEAYCRIFTRCGLDFRPVSADTGSIGGSASHEFHVLASSGEDAIAFSTGSDYAANV 233

Query: 464 NTGVLLGEG 472
                +   
Sbjct: 234 ELAEAVALA 242



 Score = 83.7 bits (205), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 25/177 (14%), Positives = 60/177 (33%), Gaps = 13/177 (7%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
           P  +      I R  + G I Q+         A  +    +     ++    +G  + R 
Sbjct: 395 PSPDGQGTLTIARGIEVGHIFQLGRKYSEAMKATVLGEDGKA---TVMTMGCYGIGVSRV 451

Query: 535 IGIMIE-NFKGNLPLWLSPIQ---AIVTTI----TSSAVEYAQEIANLLKSHHLSIETDF 586
           +   IE +       W +PI      +  +    +    E  +++   L++  + +  D 
Sbjct: 452 VAAAIEQHHDERGICWPAPIAPFEVALLPMKLGKSYRVREATEKLYAELQAAGIDVLLDD 511

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           R+    +   +  +  IP  I+ GDK   +  +  +       Q + +   +  + +
Sbjct: 512 RDARPGFMFADMELIGIPHRIVVGDKGLDDGQVEYKGRADAEMQLIPIDTIVEFVRE 568


>gi|240947869|ref|ZP_04752309.1| prolyl-tRNA synthetase [Actinobacillus minor NM305]
 gi|240297831|gb|EER48267.1| prolyl-tRNA synthetase [Actinobacillus minor NM305]
          Length = 571

 Score =  154 bits (390), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 64/329 (19%), Positives = 120/329 (36%), Gaps = 17/329 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q   +       +++   H+ + R   +  +A   SG+  W   G K+ + + + +R 
Sbjct: 3   TSQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMA---SGLYNWLPTGIKVLKKVENIVRE 59

Query: 286 KIKDD-YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LWQ+SG W+ Y A +       +     R F L P +    
Sbjct: 60  EMNKGGAIEVLMPVVQPAELWQESGRWNDYGAELLRFNDRGN-----RDFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP+ L +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLVRREVSSYKQLPLNLYQIQTKFRDEVRPRF-GVMRSREFIMKDAYSFHTTQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++ +  +I+   G +   V+  T       S      A +    V+ + ++     I
Sbjct: 174 YDVMYQVYSNIFTRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVIFSTESDFAANI 233

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
                +  G    P  +  L D          +   FNLP       +          ++
Sbjct: 234 ELAEAVAVGERQAPTADMQLVDT-PNAKTINELVEQFNLPIEKTVKTLIVKGATEEQPLV 292

Query: 524 HRAVFGSIERFIGIMIENFKGNLPLWLSP 552
              + G  E     + E      PL   P
Sbjct: 293 ALVIRGDHE-----LNEIKAQKHPLVADP 316



 Score = 94.5 bits (233), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 27/168 (16%), Positives = 61/168 (36%), Gaps = 14/168 (8%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           I R  + G I Q+        NA       +   P+++    +G  + R +   IE +  
Sbjct: 403 IKRGIEVGHIFQLGKKYSEAMNATVQGEDGK---PLVMTMGCYGIGVTRVVAAAIEQHHD 459

Query: 544 GNLPLWL----SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
               +W     +P    +  +    +     +A+E+   LK+  + +  D R E      
Sbjct: 460 ERGIIWPSDEIAPFTVAIVPMNMHKSEKVQAFAEELYKTLKAQGVDVIFDDRKERPGVMF 519

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +  +  +P +++ G+K      I  +   +   Q ++    +  L +
Sbjct: 520 ADMELIGVPHMVVIGEKNLENGEIEYKNRRTGEKQMIAKEQLLAFLAE 567


>gi|289207688|ref|YP_003459754.1| prolyl-tRNA synthetase [Thioalkalivibrio sp. K90mix]
 gi|288943319|gb|ADC71018.1| prolyl-tRNA synthetase [Thioalkalivibrio sp. K90mix]
          Length = 570

 Score =  154 bits (390), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 49/220 (22%), Positives = 90/220 (40%), Gaps = 11/220 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  L        ++E   H+ + R   +  +A    G+  W   G ++ + + + +R +
Sbjct: 4   SQFPLNTLKETPADAEIVSHQLMLRAGYVRRLAA---GLYTWLPLGLRVLRRVENIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P V    LWQ+SG WD Y A +  +K      +  R F   P +     
Sbjct: 61  MNRAGALEVLMPAVQPAELWQESGRWDFYGAELLRLKD-----RHERDFCFGPTHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +    ++SYR+LPV   +  + +R+E      G+MR R F   DA+ F    + +    
Sbjct: 116 DLVRREIRSYRQLPVNYYQIQTKFRDERRPRF-GIMRAREFLMKDAYSFHLDADSLSRTY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
            ++H+    I++  G +   V+  T       S      A
Sbjct: 175 QQMHDAYCRIFERCGLDFRAVEADTGAIGGNASHEFHVLA 214



 Score = 76.0 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 24/176 (13%), Positives = 59/176 (33%), Gaps = 11/176 (6%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           P  +      I R  + G I Q+         A  ++    +   V +     G   R +
Sbjct: 393 PAPDGSGPIEIRRGIEVGHIFQLGDKYSQALGARVLDEDG-REQVVTMGCYGIGVS-RVV 450

Query: 536 GIMIENFKGN----LPLWLSPIQAIVTTITSS----AVEYAQEIANLLKSHHLSIETDFR 587
              IE          P  ++P    +  I +       E A+++ + L++    +  D R
Sbjct: 451 AAAIEQNSDERGICWPTAIAPFDIALCPIGAKKSQRVREAAEKLHDELEAAGFQVLLDDR 510

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +       +  +  IP  ++ G++      +  +   ++  + + +   +  L +
Sbjct: 511 EQRPGVMFADMELIGIPHRLVIGERGLDAGELEYQARTASEAEHLPMDGLLDALRE 566


>gi|254360942|ref|ZP_04977088.1| proline--tRNA ligase [Mannheimia haemolytica PHL213]
 gi|261492183|ref|ZP_05988753.1| proline--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
 gi|261494250|ref|ZP_05990749.1| proline--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|153092421|gb|EDN73484.1| proline--tRNA ligase [Mannheimia haemolytica PHL213]
 gi|261310102|gb|EEY11306.1| proline--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261312163|gb|EEY13296.1| proline--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
          Length = 571

 Score =  154 bits (390), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 63/329 (19%), Positives = 120/329 (36%), Gaps = 17/329 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q   +       +++   H+ + R   +  +A   SG+  W   G K+ + + + +R 
Sbjct: 3   TSQYLFSTLKEMPNDAQVVSHQLMLRAGMIRPMA---SGLYNWLPTGIKVLKKVENIIRE 59

Query: 286 KIKDD-YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LW +SG W+ Y   +   K   +     R F L P +    
Sbjct: 60  EMNKGGAIEVLMPVVQPAELWVESGRWNDYGPELLRFKDRGE-----RDFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP+ L +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLVRREVSSYKQLPLNLYQIQTKFRDEVRPRF-GVMRSREFVMKDAYSFHTTQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++ +  +I+   G +   V+  T       S      A +    V+ + ++     I
Sbjct: 174 YDVMYQVYSNIFTRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVFSTESDFAANI 233

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
                +  G    P  E  L D          ++       +     V   + +  P +I
Sbjct: 234 ELAEAVAVGERQAPTAEMQLVDTPNAKTINELVENHGLAIEKTVKTLVVKGATEEQP-LI 292

Query: 524 HRAVFGSIERFIGIMIENFKGNLPLWLSP 552
              + G  E     + E      PL   P
Sbjct: 293 ALVIRGDHE-----LNEIKAQKHPLVADP 316



 Score = 92.2 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 61/167 (36%), Gaps = 14/167 (8%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           I R  + G I Q+         A       +   P+++    +G  + R +   IE ++ 
Sbjct: 403 IKRGIEVGHIFQLGKKYSEAMKATVQGEDGK---PLVMTMGCYGIGVTRVVAAAIEQHYD 459

Query: 544 GNLPLW----LSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
               +W    ++P    +  +    +     +A+E+   LK+  + +  D R E      
Sbjct: 460 DRGIIWPCDEMAPFTVAIVPMNMHKSEKVQAFAEELYANLKAQGVEVIFDDRKERPGVMF 519

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +  +  +P +++ G+K      I  +   S   Q ++    +  L 
Sbjct: 520 ADMELIGVPHMVVIGEKNLENGEIEYKNRRSGEKQMIAKESLLAFLK 566


>gi|194389892|dbj|BAG60462.1| unnamed protein product [Homo sapiens]
          Length = 476

 Score =  154 bits (390), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 73/411 (17%), Positives = 140/411 (34%), Gaps = 61/411 (14%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRAN 317
            D SG        + I++ +  +   +IK    E    P  + Q   + +  H   +   
Sbjct: 5   HDISGCYILRPWAYAIWEAIKDFFDAEIKKLGVENCYFPMFVSQSALEKEKTHVADFAPE 64

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           +  V  +  T       A++P +       +   ++S+R+LP++L ++ +V R E     
Sbjct: 65  VAWVTRSGKTEL-AEPIAIRPTSETVMYPAYAKWVQSHRDLPIKLNQWCNVVRWEFKHP- 122

Query: 378 HGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
              +R R F   + H  F T E+   E L+I +L   +Y++     ++    T  EK  G
Sbjct: 123 QPFLRTREFLWQEGHSAFATMEEAAEEVLQILDLYAQVYEELLAIPVVKGRKTEKEKFAG 182

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
            D                                    Y    E     A GR  Q GT 
Sbjct: 183 GD------------------------------------YTTTIE-AFISASGRAIQGGTS 205

Query: 497 QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP---- 552
                  S+                  ++  +G   R IG+M      N+ L L P    
Sbjct: 206 HHLGQNFSKMFEIVFEDPKIPGEKQFAYQNSWGLTTRTIGVMTMVHGDNMGLVLPPRVAC 265

Query: 553 IQAIVTT----------ITSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIK 601
           +Q ++               + +    +    L S ++ +  D R+  + ++K     +K
Sbjct: 266 VQVVIIPCGITNALSEEDKEALIAKCNDYRRRLLSVNIRVRADLRDNYSPDWKFNHWELK 325

Query: 602 KIPIIIICGDKEASERS-IGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
            +PI +  G ++      + +R   +     V+  +A   L  +++  D Q
Sbjct: 326 GVPIRLEVGPRDMKSCQFVAVR-RDTGEKLTVAENEAETKL--QAILEDIQ 373


>gi|192359534|ref|YP_001982928.1| prolyl-tRNA synthetase [Cellvibrio japonicus Ueda107]
 gi|190685699|gb|ACE83377.1| prolyl-tRNA synthetase [Cellvibrio japonicus Ueda107]
          Length = 611

 Score =  154 bits (390), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 52/279 (18%), Positives = 103/279 (36%), Gaps = 12/279 (4%)

Query: 189 RSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNT-QQELTQYLYFLEESEKRDHR 247
            + G   K     +++  +          S+       + +  +        ++E   H+
Sbjct: 1   MTAGSYTKCSIHRRISTFHPLPIDKHSQYSQEDTRPMRSSRFLIATLKETPADAEVISHQ 60

Query: 248 KLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQ 306
            + R   +  +A   SG+  W   G ++ + + + +R ++      E+  P V    LW+
Sbjct: 61  LMLRAGMIRKMA---SGLYNWLPLGLRVLRKVETIVREEMNKSGAMEVLMPVVQPAELWE 117

Query: 307 QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFG 366
           +SG W  Y   +  +    D     R F L P +      +  + LKSY++LP    +  
Sbjct: 118 ESGRWQQYGPELLRITDRHD-----RPFCLGPTHEEVITDLIRNELKSYKQLPANFYQIQ 172

Query: 367 SVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
           + +R+E      G+MR R F   DA+ F  T+E +      +H    +I+   G     V
Sbjct: 173 TKFRDEIRPRF-GVMRSREFIMKDAYSFHLTQESLQQTYDVMHTTYCNIFSRLGLGYRPV 231

Query: 426 KLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
              T       S      A++    ++ +  +     I 
Sbjct: 232 LADTGSIGGAYSHEFHVLADSGEDYIVFSNGSDYAANIE 270



 Score = 76.7 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 63/168 (37%), Gaps = 12/168 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKG 544
           I R  + G I Q+         A  ++ + ++   +M    +   + R +   IE NF  
Sbjct: 443 IKRGIEVGHIFQLGTKYSDAMKARVLDENGKEQTMIMGCYGI--GVTRVVAAAIEQNFDD 500

Query: 545 NLPLWL---SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIET-DFRNETINYKIR 596
           N  +W    +P    +  I    + +     +E+   L +  L +   D     +   + 
Sbjct: 501 NGIIWPDAIAPFHIAIVPINMAKSEAVATKCEELYAQLSAAGLDVLLMDEDKARLGVMLA 560

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  +  IP  I+ GD+     SI  +       Q++++ D +  L  +
Sbjct: 561 DTDLMGIPHRIVVGDRGLEAGSIEYKGRRDAEKQEIAVGDIVEFLKAQ 608


>gi|282850156|ref|ZP_06259535.1| proline--tRNA ligase [Veillonella parvula ATCC 17745]
 gi|282579649|gb|EFB85053.1| proline--tRNA ligase [Veillonella parvula ATCC 17745]
          Length = 572

 Score =  154 bits (390), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 51/228 (22%), Positives = 96/228 (42%), Gaps = 10/228 (4%)

Query: 243 KRDHRKLAREMDLF--HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQV 299
             D   +++++ L    + +  +G+  +   GW+  + + + +R ++     +EI  P +
Sbjct: 15  PSDADVVSQQLMLRAGFMRKTANGLYSFLPLGWRSIKKIEAIVREEMDRASAQEIMMPIL 74

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               +W++SG W++Y A M  +    D       F L P +      +  + + SYR+LP
Sbjct: 75  QPAEIWKESGRWNAYGAEMMRINDRHDN-----EFCLGPTHEEMITTLVKNEINSYRQLP 129

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDF 418
           V L +  S +R+E     +GLMR R F   DA+ F   E   +E  K +++    I+   
Sbjct: 130 VNLYQIQSKFRDERRPR-YGLMRSREFIMKDAYSFDVDEAGLDESYKSMYDAYTRIFTRC 188

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           G     V+  +      G+      AE     ++   K      I  G
Sbjct: 189 GLTFRPVEADSGAIGGSGTHEFMAIAEAGEADIVYCTKCDYAANIEIG 236



 Score = 71.4 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 24/174 (13%), Positives = 62/174 (35%), Gaps = 8/174 (4%)

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
            PK    L+ A G +      ++         A +++ +  + +P+++     G      
Sbjct: 396 CPKCGGALEHAKGIEV-GQVFKLGTKYSEALQATFLDQNG-RPNPMIMGCYGIGVSRTLA 453

Query: 536 GIMIENFKGNLPLWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNE 589
             + +    N  +W    +P +A++  I     + +  +Q I   L++  + +  D R +
Sbjct: 454 AAIEQYHDENGIIWPRSIAPFEAVIVPINAKDEALMSTSQTIYTALQNAGVDVLLDDRKD 513

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
               K ++  +   P+ I           + I+   S      ++      +T+
Sbjct: 514 RAGVKFKDADLIGYPLRITVSKNTLENNEVEIQIRKSGEALPCAIDSVADKVTE 567


>gi|254785039|ref|YP_003072467.1| proline--tRNA ligase [Teredinibacter turnerae T7901]
 gi|259511626|sp|C5BPN9|SYP_TERTT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|237684457|gb|ACR11721.1| proline--tRNA ligase [Teredinibacter turnerae T7901]
          Length = 574

 Score =  154 bits (390), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 48/249 (19%), Positives = 97/249 (38%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  +        ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R+
Sbjct: 3   ASQYLIATQKETPADAEVISHKLMLRAGLIRKMA---SGLYNWLPLGLRVLRKVENIVRQ 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +E+  P V    +WQ+SG W  Y   +  +    D     R F L P +    
Sbjct: 60  EMDKSGAQEVLMPVVQPAEIWQESGRWQQYGPELLRINDRHD-----RAFCLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + +KSY++LP+   +  + +R+E      G+MR R F   DA+ F   ++   E 
Sbjct: 115 TDLIRNEVKSYKQLPLNFYQIQTKFRDEVRPRF-GVMRAREFLMKDAYSFHISQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +H    +I+   G +   V   T       S      A++    +  +  +     +
Sbjct: 174 YDVMHRTYCNIFDRIGLQYRPVLADTGSIGGSASHEFHVLADSGEDDIAFSSDSDFAANV 233

Query: 464 NTGVLLGEG 472
                L   
Sbjct: 234 ELAEALAPA 242



 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/173 (16%), Positives = 67/173 (38%), Gaps = 15/173 (8%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           I R  + G I Q+     +   A  ++ + +    V +    +G  + R +   IE N  
Sbjct: 406 IKRGIEVGHIFQLGTKYSAAMKATVLDENGKD---VTMTMGCYGIGVSRIVASAIEQNHD 462

Query: 544 GNLPLWL---SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIET-DFRNETINYKI 595
            N  +W    +P Q  +  I    + +  E  + + +  ++  + +   D     +   +
Sbjct: 463 DNGIIWPDAIAPFQLAIVPINMHKSDAVKEACETLYDQCQTAGIDVLLMDEPKARLGAML 522

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
            +  +  IP  ++ GD+   + +I  +      +Q+V+       L +E + P
Sbjct: 523 ADVELVGIPHRVVIGDRGLEQGNIEYKGRRDAESQEVAAASLFEFL-REKIAP 574


>gi|292491210|ref|YP_003526649.1| prolyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
 gi|291579805|gb|ADE14262.1| prolyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
          Length = 575

 Score =  154 bits (390), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 46/241 (19%), Positives = 91/241 (37%), Gaps = 11/241 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  LT       ++E   H+ + R   +  +A    G+  W   G ++ + +   +R 
Sbjct: 3   TSQYLLTTTRETPADAEIISHQLMLRGGFIRRLAA---GLYTWLPLGLRVLRKVEGIIRE 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +EI  P V    LWQ++G W+ Y   +        T +  R F   P +    
Sbjct: 60  EMDKAGAQEILMPAVQPAELWQETGRWEQYGPELLRF-----TDRHQRPFCFGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    ++SY++LP    +    +R+E      G+MR R F   DA+ F   +    + 
Sbjct: 115 TDLIRREIRSYKQLPANFYQIQVKFRDEIRPRF-GVMRAREFLMKDAYSFHLDQTSLEQT 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             +++     I++  G     V+  T       S      A +    +  + K +    +
Sbjct: 174 YQQMYETYSRIFERIGLTFRAVQADTGAIGGQTSHEFHVLAASGEDAIAFSDKGTYAANV 233

Query: 464 N 464
            
Sbjct: 234 E 234



 Score = 81.8 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 62/170 (36%), Gaps = 13/170 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGN 545
           R  + G I Q+        N   ++   +    +++    +G  + R +   IE N   +
Sbjct: 404 RGIEVGHIFQLGEKYSQAMNTTVLDETGQA---IILTMGCYGIGVSRVVAAAIEQNHDEH 460

Query: 546 LPLWL---SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
             +W    +P Q  +  I    +    E A ++ + L++    +  D R         + 
Sbjct: 461 GIIWPDPIAPFQLALVPINAHKSVRVRETADQLYSQLQAAGFEVLLDDRQLRPGVIFTDM 520

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
            +  IP  ++  D+     ++  +R     T  + L + IP L  E   P
Sbjct: 521 DLIGIPHRLVISDRGLDAGTVEYKRRRDGKTSTIQLDNLIPGLKSELKTP 570


>gi|189501728|ref|YP_001957445.1| prolyl-tRNA synthetase [Candidatus Amoebophilus asiaticus 5a2]
 gi|259511573|sp|B3ER64|SYP_AMOA5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|189497169|gb|ACE05716.1| hypothetical protein Aasi_0277 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 491

 Score =  154 bits (390), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 77/432 (17%), Positives = 154/432 (35%), Gaps = 70/432 (16%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
             E+    + ++ +  +L   A     +      G+ I++ + + + +  K   +E    
Sbjct: 8   RAENFSEWYNEIIKRAELAENAAVRGCMTI-RPYGFAIWEKMQAILDKAFKATGHENAYF 66

Query: 297 PQVLDQ-----------HLWQQSGHWDSYR---ANMFAVKCADDTIKDLRTFALKPMNCP 342
           P  + +              ++      YR            D + K      ++P +  
Sbjct: 67  PIFIPKSYLNREAAHVEGFAKECAVVTHYRLKATEDGQQVVVDPSAKLEEELIVRPTSET 126

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN 402
                + + ++SYR+LP+ + ++ +V R E        +R   F   + H   T      
Sbjct: 127 IIWNSYKNWIQSYRDLPLLINQWCNVVRWEMR--TRLFLRTAEFLWQEGH---TAHATQA 181

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
           E  +    +++IY DFG                                 D +       
Sbjct: 182 EAEQEALQMLNIYADFGK--------------------------------DYLAIPFLKG 209

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF-NAFYVNSHSEKCHPV 521
           I T      GA      E +++D  G+  Q GT      L  RF  AF V   ++     
Sbjct: 210 IKTEHERFAGAEETYTIEALMQD--GKALQAGTSHF---LGQRFAKAFEVTFTNQAGQLD 264

Query: 522 MIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVE------YAQEI 571
            +    +G   R IG ++    ++    LP  ++PIQ ++  I  +  E       AQ I
Sbjct: 265 YVWGTSWGLTTRLIGALVMTHSDDKGLVLPPRVAPIQIVIIPIYRTQEEKEAIQQQAQHI 324

Query: 572 ANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
              L +H++S + D R+E    +K  E+ +K +PI +  G  + +  ++ + R  ++   
Sbjct: 325 QQQLIAHNISAKLDGRDEHKPGWKFAEYELKGVPIRMAIGPNDLANNTVELTRRDTSEKT 384

Query: 631 KVSLLDAIPILT 642
            V   + I ++ 
Sbjct: 385 TVPTDNIIVVVK 396


>gi|145532883|ref|XP_001452194.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124419877|emb|CAK84797.1| unnamed protein product [Paramecium tetraurelia]
          Length = 299

 Score =  154 bits (390), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 78/166 (46%), Positives = 100/166 (60%), Gaps = 7/166 (4%)

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
            SYR+LPVR A+FG ++RNE  G+L GL RVR F QDDAH+FC  +Q+  E     + + 
Sbjct: 4   HSYRDLPVRFADFGVLHRNEVHGALSGLTRVRRFQQDDAHIFCRMDQIQEEIKSCLDFLS 63

Query: 413 SIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
            IY  FGFE  +  LSTRPEK +G+  +WD+AE  ++  L              V  G+G
Sbjct: 64  YIYSLFGFEFKL-YLSTRPEKFLGTKEVWDNAEYQLEQGLKKFGKP------FEVNPGDG 116

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC 518
           AFYGPK +  L DA  R+ QCGTIQ+DFNLP RFN  Y  S   + 
Sbjct: 117 AFYGPKIDVKLYDAYKREHQCGTIQLDFNLPERFNLQYRASEDVQE 162


>gi|170063637|ref|XP_001867188.1| bifunctional aminoacyl-tRNA synthetase [Culex quinquefasciatus]
 gi|167881196|gb|EDS44579.1| bifunctional aminoacyl-tRNA synthetase [Culex quinquefasciatus]
          Length = 1677

 Score =  154 bits (389), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 72/385 (18%), Positives = 139/385 (36%), Gaps = 62/385 (16%)

Query: 273  WKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKD 330
            + +++ + ++   +I     +E   P  + +   + +  H   +   +  V  + ++   
Sbjct: 1217 FAVWKAIKAWFDAEITKMGVKECYFPIFVSRAALEREKDHIADFAPEVAWVTKSGESDL- 1275

Query: 331  LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
                A++P +       +   ++SYR+LP+RL ++ +V R E        +R R F   +
Sbjct: 1276 AEPIAVRPTSETVMYPAYAKWIQSYRDLPIRLNQWNNVVRWEFK-HPQPFLRTREFLWQE 1334

Query: 391  AHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMK 449
             H  F T+ +   E L+I  L   +Y D     ++    T  EK  G D           
Sbjct: 1335 GHTAFATQAEATEEVLQILELYAQVYTDLLAIPVVRGRKTEKEKFAGGD----------- 1383

Query: 450  GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNA 508
                                     +    E     A GR  Q  T   +  N    F+ 
Sbjct: 1384 -------------------------FTTTVE-AFISASGRAIQGATSHHLGQNFSKMFDI 1417

Query: 509  FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTTITSSA 564
             Y +  +++     +++  +G   R IG+MI     N  L L P    IQAI+     +A
Sbjct: 1418 VYEHPETKEK--EYVYQNSWGITTRTIGVMIMVHADNQGLVLPPRVACIQAIIVPCGITA 1475

Query: 565  V----------EYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKE 613
                       +  +E+   L    +  E D+R+  +  +K     +K +PI +  G K+
Sbjct: 1476 NTTDEERKTLYDNCKELEAELVKAGVRCEGDYRDNYSPGWKYNHWELKGVPIRVELGFKD 1535

Query: 614  ASERS-IGIRRFGSTTTQKVSLLDA 637
               +  + +R   +     V    A
Sbjct: 1536 LKNKQFVAVR-RDTGDKITVKREAA 1559


>gi|225559335|gb|EEH07618.1| prolyl-tRNA synthetase [Ajellomyces capsulatus G186AR]
          Length = 606

 Score =  154 bits (389), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 82/431 (19%), Positives = 158/431 (36%), Gaps = 69/431 (16%)

Query: 247 RKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHL- 304
           + L +   L +   D SG        + I++T+ ++   +IK    +  + P  + + + 
Sbjct: 109 QVLLKGQMLDY--YDVSGCFILKPHSYFIWETIQNWFNDRIKKMGVKNCSFPLFVSEDVL 166

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
            ++  H + + A +  V  A ++ K  R  A++P +       +   ++S+R+LP+RL +
Sbjct: 167 KKEKDHIEGFAAEVAWVTHAGNS-KLERKIAIRPTSETVMYPYYAKWIRSHRDLPLRLNQ 225

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN-ECLKIHNLIISIYKDFGFEKI 423
           + SV R E        +R R F   + H     E     E L+I      +Y++     +
Sbjct: 226 WNSVVRWEFKNP-QPFLRTREFLWQEGHTAHLTEGGAREEVLQILEHYAHVYEELLAIPV 284

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +    T  EK  G                                      Y    E  +
Sbjct: 285 IRGQKTEKEKFAGG------------------------------------LYTTTVEGYI 308

Query: 484 KDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSH---SEKCHPVMIHRAVFGSIERFIGIMI 539
             A GR  Q GT   +  N    F     +      EK   + + +  +G   R IGIM+
Sbjct: 309 P-ATGRGIQGGTSHGLGQNFSKMFGITVEDPSAKPDEKKPALHVWQNSWGLSTRTIGIMV 367

Query: 540 ENFKGNLPLWLSP----IQAIVTTITSSA----VEYA------QEIANLLKSHHLSIETD 585
                +  L + P    IQ ++  + + A     E A        +A +L++  + +E D
Sbjct: 368 MVHGDDRGLVIPPRVADIQTVIVPVGTGAKTTDAEKASLMAEIDALAAVLEAAGVRVEVD 427

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRF---GSTTTQKVSLLDA---IP 639
            R+ T  +K  +  +  +P+ +  G  E++   +   R    G      + +      +P
Sbjct: 428 KRDYTPGWKFNDWELHGVPLRLEFGPGESAGHYVTASRRDILGKDGKSTIPITQLAVQVP 487

Query: 640 ILTKESLPPDC 650
            L  E++  D 
Sbjct: 488 ALL-ETIQADL 497


>gi|126667243|ref|ZP_01738216.1| prolyl-tRNA synthetase [Marinobacter sp. ELB17]
 gi|126628188|gb|EAZ98812.1| prolyl-tRNA synthetase [Marinobacter sp. ELB17]
          Length = 576

 Score =  154 bits (389), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 46/249 (18%), Positives = 92/249 (36%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  +        ++E   H+ + R   +  +A    G+  W   G +    +   +R 
Sbjct: 3   ASRYLIATQKETPADAEIISHQLMLRAGLIRKLAA---GLYTWLPMGLRTLHKVERIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +E+  P V    LW++SG WD Y   +  +       +  R F   P +    
Sbjct: 60  EMDRSGAQELLMPAVQPAELWRESGRWDEYGGELLRMND-----RHGREFCFGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNE 403
             +  + LKSY++LP    +  + +R+E      G+MR R F   DA+ F    E +   
Sbjct: 115 TDLIRNELKSYKQLPANFFQIQTKFRDERRPRF-GVMRAREFIMKDAYSFHINAESLDET 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +H    +I+   G +   V+  +      GS      A +    ++ +  +     I
Sbjct: 174 YQLMHRTYCAIFDRLGLDYRPVQADSGAIGGSGSQEFHVLASSGEDAIVFSTGSDYAANI 233

Query: 464 NTGVLLGEG 472
                +   
Sbjct: 234 EKAEAVAPA 242



 Score = 91.0 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 32/164 (19%), Positives = 58/164 (35%), Gaps = 9/164 (5%)

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN- 545
           I R  + G I    N  S+     V   + K   + +     G   R +   IE    + 
Sbjct: 409 IRRGIEVGHIFKLGNKYSKALNATVLDENGKTATIYMGCYGIGVS-RIVAASIEQNHDDR 467

Query: 546 ---LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
               P  ++P +  V  +    + +  E  +++   L+     +  D RNE    K  + 
Sbjct: 468 GIIWPDAIAPFRVAVVLLNGHKSPTVAEAGEKLYQQLQEAGYDVLLDDRNERPGVKFADM 527

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +  IP   +  D+     ++  +       Q V+L DAI  L 
Sbjct: 528 ELTGIPHRFVVSDRGLEAGTLEYKGRRDADKQDVALADAINFLK 571


>gi|294791808|ref|ZP_06756956.1| proline--tRNA ligase [Veillonella sp. 6_1_27]
 gi|294793669|ref|ZP_06758806.1| proline--tRNA ligase [Veillonella sp. 3_1_44]
 gi|294455239|gb|EFG23611.1| proline--tRNA ligase [Veillonella sp. 3_1_44]
 gi|294457038|gb|EFG25400.1| proline--tRNA ligase [Veillonella sp. 6_1_27]
          Length = 572

 Score =  154 bits (389), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 51/228 (22%), Positives = 96/228 (42%), Gaps = 10/228 (4%)

Query: 243 KRDHRKLAREMDLF--HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQV 299
             D   +++++ L    + +  +G+  +   GW+  + + + +R ++     +EI  P +
Sbjct: 15  PSDADVVSQQLMLRAGFMRKTANGLYSFLPLGWRSIKKIEAIVREEMDRASAQEIMMPIL 74

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               +W++SG W++Y A M  +    D       F L P +      +  + + SYR+LP
Sbjct: 75  QPAEIWKESGRWNAYGAEMMRINDRHDN-----EFCLGPTHEEMITTLVKNEINSYRQLP 129

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDF 418
           V L +  S +R+E     +GLMR R F   DA+ F   E   +E  K +++    I+   
Sbjct: 130 VNLYQIQSKFRDERRPR-YGLMRSREFIMKDAYSFDVDEAGLDESYKSMYDAYTRIFTRC 188

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           G     V+  +      G+      AE     ++   K      I  G
Sbjct: 189 GLTFRPVEADSGAIGGSGTHEFMAIAEAGEADIVYCTKCDYAANIEIG 236



 Score = 70.6 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 24/174 (13%), Positives = 62/174 (35%), Gaps = 8/174 (4%)

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
            PK    L+ A G +      ++         A +++ +  + +P+++     G      
Sbjct: 396 CPKCGGALEHAKGIEV-GQVFKLGTKYSEALQATFLDQNG-RPNPMIMGCYGIGVSRTLA 453

Query: 536 GIMIENFKGNLPLWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNE 589
             + +    N  +W    +P +A++  I     + +  +Q I   L++  + +  D R +
Sbjct: 454 AAIEQYHDENGIIWPRSIAPFEAVIVPINAKDEALMSTSQTIYTALQNAGVDVLLDDRKD 513

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
               K ++  +   P+ I           + I+   S      ++      +T+
Sbjct: 514 RAGVKFKDADLIGYPLRITVSKNTLENNEVEIQIRKSGEALPCAIDSVSDKVTE 567


>gi|302411110|ref|XP_003003388.1| prolyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
 gi|261357293|gb|EEY19721.1| prolyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
          Length = 474

 Score =  154 bits (389), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 83/429 (19%), Positives = 168/429 (39%), Gaps = 39/429 (9%)

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
            +R H KL R   L    +  SG+      G++I   L S + + ++      +    + 
Sbjct: 53  TERAHDKLIRAGLLR---QSHSGIFHLLPMGYRIQSKLESLIDKYMQSLGASRVALSSIT 109

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            + LWQQSG ++   + +F  +      +    + L P +     ++    +KSY+ELP+
Sbjct: 110 SKKLWQQSGRYEKLGSELFNFQD-----RRGADYMLAPTHEEEVTSLVAQSVKSYKELPL 164

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RL +    YR+E     HGL+R R FT  D + F        +  +      + +  FG 
Sbjct: 165 RLYQTTRKYRDELRPR-HGLLRTREFTMKDLYTFDVDTSAAIQTYEQVQGAYASF--FGS 221

Query: 421 EKIMVKLSTRPEKRVGSDALWD-DAENIMKGVLDTIKNSSQDRINTGVLLGEG------A 473
             + V  +      +G D   +    + +   L    N+ +  +N+ +           A
Sbjct: 222 LGLPVVKARAGSGDMGGDLSHEYHFTSPIGEDLIMKCNNCEFAVNSDIAEQPANDSAMDA 281

Query: 474 FYGPKFE---YILKDAI--GRDWQCG-----TIQVDFNLPSRFNAFYVNSHSEKCHP-VM 522
            + PK E     +K+A+  G  +  G      +     LP+       ++ +        
Sbjct: 282 QHCPKCEAGTLEVKEALEVGHTFHLGTRYSEPLGARIALPTTSQGDSQSADTSAARASTH 341

Query: 523 IHRAVFGS-IERFIGIMIENFKG----NLPLWLSPIQAIVT---TITSSAVEYAQEIANL 574
           I     G  + R IG + E+F        P  +SP +  +     + + AV+   ++ + 
Sbjct: 342 IQMGCHGIGVSRLIGAVAEHFADPVGLQWPRAISPYEVEIVFADGLEAQAVQIYDDVVHG 401

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           L SH   +  D R  ++ +K+++  +   PI+++ G       +I ++       + V  
Sbjct: 402 L-SHTTDVLLDDRPVSLPWKLKDADLTGYPIVVVLGQVWKKTGNIELQCRRLGIKETVQP 460

Query: 635 LDAIPILTK 643
            D +  +++
Sbjct: 461 SDILQRISE 469


>gi|332019229|gb|EGI59739.1| Bifunctional aminoacyl-tRNA synthetase [Acromyrmex echinatior]
          Length = 2487

 Score =  154 bits (389), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 103/572 (18%), Positives = 196/572 (34%), Gaps = 75/572 (13%)

Query: 106  YDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESI 165
            Y     Q +   ++   E K++     +    K     E+ ++  +  +     +  +SI
Sbjct: 1859 YKNTTGQDWKPVDIKVTESKVKP---ENQEISKAEKISEEIKKQGDKVRNLKSSKAEKSI 1915

Query: 166  PAKENVTLYRQGEWFDLCRG----PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIY 221
              +E          +    G    P    + + K   K   ++      ++N    S   
Sbjct: 1916 IDQEVKVFLSLKSDYKSLTGQDWKPVNSVSKKEKHISKPENISEKEVAKNANNNKDSDSS 1975

Query: 222  GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLIS 281
             T      E  +   F +      + ++  +  +     D SG        + I++ +  
Sbjct: 1976 KTGTRLGLEAKKEENFTD-----WYSQVITKSGMIEY-YDVSGCYILRPWSFSIWKIIKE 2029

Query: 282  YMRRKIKD-DYEEINTPQ-VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPM 339
            ++ ++I D   +E   P  V    L ++  H   +   +  V    +T       A++P 
Sbjct: 2030 FIDKEITDIGVQECYFPIFVTRSVLEKEKAHIADFAPEVAWVTKYGETDL-AEPIAIRPT 2088

Query: 340  NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKE 398
            +       +   L+S  ELP+RL ++ +V R E        +R R F   + H  F TK 
Sbjct: 2089 SETIMYPAYAKWLRSDTELPLRLNQWNNVVRWEFKDP-KPFLRTREFLWQEGHTAFATKA 2147

Query: 399  QMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNS 458
            +   E L I +L   +Y+D     ++    T  EK  G +                    
Sbjct: 2148 EAEAEVLMILDLYARVYEDLLAVPVIKGRKTEKEKFAGGE-------------------- 2187

Query: 459  SQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC 518
                            Y    E  +    GR  Q  T        S+     V   + + 
Sbjct: 2188 ----------------YTTTVEAFIP-INGRAIQGATSHYLGQNFSKMFNIQVEGIAGRE 2230

Query: 519  HPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTT--ITSSAVEYAQE-- 570
                +++  +G   R IG+MI    ++    LP  ++PIQ IV    I  +  E+ +E  
Sbjct: 2231 EKTFVYQNSWGLTTRTIGVMIMVHGDDRGLVLPPNVAPIQIIVIPCGIAVNMDEHTKESI 2290

Query: 571  ------IANLLKSHH-LSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
                  +   L       +++D R N T  +K     +K +PI +  G K+  +  + + 
Sbjct: 2291 LKKCDWLVRHLGQEGKFRVKSDCRLNRTPGWKFNHWELKGVPIRLEVGPKDLLKNQVTVV 2350

Query: 623  RFGSTTTQKVSL--LDAIPILTKESLPPDCQK 652
            R  +     + +   + I  LT  S+  D QK
Sbjct: 2351 RRDNFQRTAIEIYNDNIITPLT--SILNDVQK 2380



 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 41/271 (15%), Positives = 93/271 (34%), Gaps = 16/271 (5%)

Query: 106  YDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESI 165
            Y     Q +   ++   E K++     +    K     E+ ++  +  +     +  +SI
Sbjct: 1416 YKNATGQDWKPADIKVTESKVKP---ENQEISKAEKISEEIKKQGDKVRNLKSSKAEKSI 1472

Query: 166  PAKENVTLYRQGEWFDLCRG----PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIY 221
              +E          +    G    P    + + K   K   ++      ++N    S   
Sbjct: 1473 IDQEVKVFLSLKSDYKSLTGQDWKPVNSVSKKEKHISKPENISEKEVAKNANNNKDSDSS 1532

Query: 222  GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLIS 281
             T      E  +   F +      + ++  +  +     D SG        + I++ +  
Sbjct: 1533 KTGTRLGLEAKKEENFTD-----WYSQVITKSGMIEY-YDVSGCYILRPWSFSIWKIIKE 1586

Query: 282  YMRRKIKD-DYEEINTPQ-VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPM 339
            ++ ++I D   +E   P  V    L ++  H   +   +  V    +T       A++P 
Sbjct: 1587 FIDKEITDIGVQECYFPIFVTRSVLEKEKAHIADFAPEVAWVTKYGETDL-AEPIAIRPT 1645

Query: 340  NCPGHVAVFNHGLKSYRELPVRLAEFGSVYR 370
            +       +   L+S  ELP+RL ++ +V +
Sbjct: 1646 SETIMYPAYAKWLRSDTELPLRLNQWNNVVK 1676


>gi|307544897|ref|YP_003897376.1| prolyl-tRNA synthetase [Halomonas elongata DSM 2581]
 gi|307216921|emb|CBV42191.1| prolyl-tRNA synthetase [Halomonas elongata DSM 2581]
          Length = 573

 Score =  154 bits (389), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 44/246 (17%), Positives = 95/246 (38%), Gaps = 11/246 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  +        +++   H+ + R   +  +    +G+  W   G +  + + + +R 
Sbjct: 3   ASQLLIATLKETPADADIVSHQLMLRAGMIRRL---NAGLYTWLPLGLRTLRKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +E+  P +    LWQ+SG WD Y   +  ++   D     R F   P +    
Sbjct: 60  EMNRAGAQEVLMPAIQPAELWQESGRWDQYGNLLLRIRDRHD-----RDFCYGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L+SY+++P    +  + +R+E      G+MR R F   DA+ F   +      
Sbjct: 115 TDLVRNELRSYKQVPSNFYQIQTKFRDETRPRF-GVMRAREFIMKDAYSFDVDQAGLQRS 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +++  + I+   G +   V+         GS      A++    V+ +  +     I
Sbjct: 174 YDAMYDAYVRIFTRLGLDFRAVEADNGDIGGSGSHEFQVLADSGEDAVVFSTSSDYAANI 233

Query: 464 NTGVLL 469
                L
Sbjct: 234 EKAEAL 239



 Score = 64.8 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/176 (14%), Positives = 64/176 (36%), Gaps = 11/176 (6%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           P  +     +I R  + G + Q+     +  NA  ++ + +   P+++     G   R +
Sbjct: 396 PSPDGQGTLSIARGIEVGHVFQLGTKYSTAMNATVLDDNGQAV-PLLMGCYGIGVT-RVV 453

Query: 536 GIMIENFKGN----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFR 587
              IE    +     P  ++P    +  +    +    + ++ +   L    L +  D R
Sbjct: 454 AAAIEQNHDDAGIIWPDAIAPFNVALVPMNAHKSQRVRDESERLYQALSDAGLDVLLDDR 513

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +     +  +  +  IP  I+ GD+   +  +  +    +    + + D I  L +
Sbjct: 514 DLRPGVRFADQELMGIPHRIVIGDRSLDKGELEYKGRRDSEATMIPIDDVIAFLRE 569


>gi|87121381|ref|ZP_01077270.1| prolyl-tRNA synthetase [Marinomonas sp. MED121]
 gi|86163224|gb|EAQ64500.1| prolyl-tRNA synthetase [Marinomonas sp. MED121]
          Length = 575

 Score =  154 bits (389), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 46/249 (18%), Positives = 97/249 (38%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +    +       ++    H+ + R   +  +++   G+  W   G K+F+ + + +R 
Sbjct: 3   ASNYLFSTLRNPPTDAVVTSHKLMMRAGMIRQVSK---GLYTWLPTGLKVFRKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           +++     EI  P V  + LW++SG W  Y   +  +K      +  R + L P +    
Sbjct: 60  EMQRAGALEIIMPGVQPKELWEESGRWQEYGPELLRIKD-----RHERDYCLGPTHEEVV 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNE 403
             +  + + SY++LP+ L +  + +R+E      G+MR R F   DA+ F  + E +   
Sbjct: 115 TDLVRNEISSYKQLPLNLFQIQTKFRDEVRPRF-GVMRSREFMMKDAYSFHSSPESLQTT 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +H     ++   G     V+  T       S      AE+    +  +  +     I
Sbjct: 174 YDVMHEAYCKVFDRVGLNYRPVRADTGSIGGAFSHEFHVLAESGEDDIAFSDSSDFAANI 233

Query: 464 NTGVLLGEG 472
                + + 
Sbjct: 234 ELAEAISDK 242



 Score = 90.2 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 32/165 (19%), Positives = 62/165 (37%), Gaps = 13/165 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           I R  + G I Q+        NA  ++ + +      +    +G  + R +   IE NF 
Sbjct: 409 IKRGIEVGHIFQLGQKYADALNANVLDENGKAQT---MWMGCYGIGVSRVVAAAIEQNFD 465

Query: 544 GNLPLWL---SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
               LW    +P Q  +  +    + +  E A  I   L++  + +  D R  +   K  
Sbjct: 466 DKGILWPDAIAPFQVSIVAMKYEKSEAVREQADRIYAELQAAGVDVMLDDRKASPGVKFA 525

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           +  +  IP  ++  DK   + +I  +   +     +SL   +  L
Sbjct: 526 DAELLGIPHRVVISDKGLEKGTIEYKHRRTGDNDDLSLDSLVKTL 570


>gi|198425469|ref|XP_002126649.1| PREDICTED: similar to glutamyl-prolyl-tRNA synthetase [Ciona
            intestinalis]
          Length = 1442

 Score =  154 bits (389), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 71/410 (17%), Positives = 140/410 (34%), Gaps = 64/410 (15%)

Query: 260  EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRAN 317
             D SG        + I++ +  +   +IK    E    P  + Q   + +  H D +   
Sbjct: 970  YDISGCYILRPWSYGIWEKIKEFFDAEIKKLGVENSYFPIFVSQAALEREKNHIDDFAPE 1029

Query: 318  MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
            +  V  + +T       A++P +       +   ++S+R+LP++  ++ ++ R E     
Sbjct: 1030 VAWVTKSGETELQ-EPIAVRPTSETVMYPAYAKWIQSHRDLPLKYNQWCNIVRWEFK-HP 1087

Query: 378  HGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
               +R R F   + H  F   ++   E L+I +L   +Y+D     ++    T  EK  G
Sbjct: 1088 QPFLRTREFLWQEGHTAFAEAKEAQEEVLQILDLYAQVYEDLLAIPVVCGRKTDKEKFAG 1147

Query: 437  SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
             D                                    Y    E     A GR  Q  T 
Sbjct: 1148 GD------------------------------------YTTTVE-AFISASGRAIQGATS 1170

Query: 497  QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI--- 553
                   S+         ++    V+ ++  +G   R IG+M+     +  L L P    
Sbjct: 1171 HHLGQNFSKMFDISFEDPNQPVKNVIAYQNSWGLTTRTIGVMVMVHGDDKGLVLPPKVAN 1230

Query: 554  -QAIVTTIT--------SSAVEY--AQEIANLLKSHHLSIETDFRNE-TINYKIREHSIK 601
             Q ++               V Y    +  + LKS  +  ++D R+  +  +K     +K
Sbjct: 1231 LQVVIVPCGVTASLPEEDKKVLYSKCDDYLSKLKSVGIRAKSDTRDNYSPGWKFNHWELK 1290

Query: 602  KIPIIIICGDKEASERS-IGIRRFGSTTTQ------KVSLLDAIPILTKE 644
             +PI +  G ++  ++  + + R               S+ D +  +  E
Sbjct: 1291 GVPIRLEVGPRDLKQQQCVVVLRHDGRKITIPDADVTTSIADLLVTIQAE 1340


>gi|224064768|ref|XP_002301553.1| predicted protein [Populus trichocarpa]
 gi|222843279|gb|EEE80826.1| predicted protein [Populus trichocarpa]
          Length = 498

 Score =  154 bits (389), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 77/401 (19%), Positives = 144/401 (35%), Gaps = 61/401 (15%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYM-----RRKIKDDYEEINTPQVLDQHLWQQSGHWDSY 314
            D SG          I++T+ ++      + KIK+ Y       V    L ++  H + +
Sbjct: 42  YDISGCYILRPWSMSIWETMQAFFDVEIKKMKIKNCY---FPLFVSSSVLQKEKDHIEGF 98

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
              +  V  A  +  ++   A++P +       F+  ++ +R+LP++L ++ +V R E S
Sbjct: 99  APEVAWVTKAGKSDLEV-PVAIRPTSETVMYPYFSKWIRGHRDLPLKLNQWCNVVRWEFS 157

Query: 375 GSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
                 +R R F   + H  F +K++   E L+I  L   IY++F    ++    +  EK
Sbjct: 158 NPT-PFIRSREFLWQEGHTAFASKQEADEEVLQILELYRRIYEEFLAIPVIKGKKSEMEK 216

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
             G                                      Y    E  + +  GR  Q 
Sbjct: 217 FAGG------------------------------------LYTTSVEAFIPNT-GRGIQG 239

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP- 552
            T        ++   F +N  +EK    M  +  +    R IG+M+     +  L L P 
Sbjct: 240 ATSHCLGQNFAK--MFEINFENEKGEKGMAWQNSWAYSTRTIGVMVMVHGDDKGLVLPPK 297

Query: 553 ---IQAIVTTI------TSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIREHSIKK 602
              +Q IV  +      T    +      + L    +  E DFR N +  +K     +K 
Sbjct: 298 VASVQVIVVPVPYKDADTQGIFDACAATVDTLCEAGIRAEADFRENYSPGWKYSHWEMKG 357

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +P+ I  G K+ +   +   R  +     +S    +  +  
Sbjct: 358 VPLRIEIGPKDLANNQVRAVRRDNAAKVDISRDSLMEKVKD 398


>gi|238019359|ref|ZP_04599785.1| hypothetical protein VEIDISOL_01223 [Veillonella dispar ATCC 17748]
 gi|237864058|gb|EEP65348.1| hypothetical protein VEIDISOL_01223 [Veillonella dispar ATCC 17748]
          Length = 572

 Score =  154 bits (389), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 51/228 (22%), Positives = 96/228 (42%), Gaps = 10/228 (4%)

Query: 243 KRDHRKLAREMDLF--HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQV 299
             D   +++++ L    + +  +G+  +   GW+  + + + +R ++     +EI  P +
Sbjct: 15  PSDADVVSQQLMLRAGFMRKTANGLYSFLPLGWRSIKKIEAIVREEMDRASAQEIMMPIL 74

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               +W++SG W++Y A M  +    D       F L P +      +  + + SYR+LP
Sbjct: 75  QPAEIWKESGRWNAYGAEMMRINDRHDN-----EFCLGPTHEEMITTLVKNEINSYRQLP 129

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDF 418
           V L +  S +R+E     +GLMR R F   DA+ F   E   +E  K +++    I+   
Sbjct: 130 VNLYQIQSKFRDERRPR-YGLMRSREFIMKDAYSFDVDEAGLDESYKSMYDAYTRIFTRC 188

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           G     V+  +      G+      AE     ++   K      I  G
Sbjct: 189 GLTFRPVEADSGAIGGSGTHEFMAIAEAGEADIVYCTKCDYAANIEIG 236



 Score = 71.0 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 19/152 (12%), Positives = 53/152 (34%), Gaps = 7/152 (4%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL---SPIQ 554
           +         A +++ +  + +P+++     G        + +    N  +W    +P +
Sbjct: 417 LGTKYSEALQATFLDQNG-RPNPMIMGCYGIGVSRTLAAAIEQYHDENGIIWPRAIAPFE 475

Query: 555 AIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
           A++  I     + +  +Q I   L+   + +  D R +    K ++  +   P+ I    
Sbjct: 476 AVIVPINAKDEALMSTSQTIYTALQDAGVDVLLDDRKDRAGVKFKDADLIGYPLRITVSK 535

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
                  + I+   S      ++      +T+
Sbjct: 536 NTLENNEVEIQIRKSGEAITCAIDSVATKVTE 567


>gi|319902090|ref|YP_004161818.1| prolyl-tRNA synthetase [Bacteroides helcogenes P 36-108]
 gi|319417121|gb|ADV44232.1| prolyl-tRNA synthetase [Bacteroides helcogenes P 36-108]
          Length = 497

 Score =  154 bits (389), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 68/438 (15%), Positives = 156/438 (35%), Gaps = 73/438 (16%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
              E+  + + +L  + DL   +     ++     G+ I++ +   +    K+  +    
Sbjct: 10  KRSENYSQWYNELVVKADLAEQSAVRGCMVI-KPYGYAIWEKMQRQLDDMFKETGHVNAY 68

Query: 296 TPQVLDQHLW-QQSGHWDSYRANMFAVKCA-------------DDTIKDLRTFALKPMNC 341
            P ++ +    +++ H + +      V                D   K      ++P + 
Sbjct: 69  FPLLIPKSFLSREAEHVEGFAKECAVVTHYRLKNDPNGGGVVVDPAAKLEEELIIRPTSE 128

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
                 + + + SYR+LP+   ++ +V+R E        +R   F   + H   T     
Sbjct: 129 TIIWNTYKNWINSYRDLPILCNQWANVFRWEMR--TRLFLRTAEFLWQEGH---TAHATR 183

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E  +    ++++Y +F                                    +      
Sbjct: 184 EEAEEEAVRMLNVYGEF--------------------------------AEKYMAVPVVK 211

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHP 520
            + +      GA      E +++D  G+  Q GT   +  N    F+  +VN  ++  + 
Sbjct: 212 GVKSANERFAGALNTYTIEAMMQD--GKALQSGTSHFLGQNFAKAFDVQFVNKENKMEY- 268

Query: 521 VMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTIT------SSAVEYAQE 570
             +    +G   R +G +I    ++    LP  L+PIQ ++  I       S   E    
Sbjct: 269 --VWATSWGVSTRLMGALIMTHSDDNGLVLPPHLAPIQVVIVPIYKNAEMLSKIDEKVAG 326

Query: 571 IANLLKSHHLSIETDF-RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           I   LKS  +S++ D   N+   +K  ++ +K +P+ ++ G ++    ++ + R  +   
Sbjct: 327 IVAKLKSMGISVKYDNADNKRPGFKFADYEVKGVPVRLVMGGRDLENSTMEVMRRDTLEK 386

Query: 630 QKVS---LLDAIPILTKE 644
           +  S   + + I  L ++
Sbjct: 387 ETRSCEGIEEYIKDLLED 404


>gi|315502429|ref|YP_004081316.1| prolyl-tRNA synthetase [Micromonospora sp. L5]
 gi|315409048|gb|ADU07165.1| prolyl-tRNA synthetase [Micromonospora sp. L5]
          Length = 468

 Score =  154 bits (389), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 61/406 (15%), Positives = 138/406 (33%), Gaps = 53/406 (13%)

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
            R ++ L  +  L         ++     G+ I++ + + M  +IK    E    P  + 
Sbjct: 13  PRWYQDLIAKAKLADNGPVRGTMVI-RPAGYAIWERMQAEMDARIKAAGAENAYFPLFIP 71

Query: 302 QHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +   + ++ H + +   +  V              ++P +           + SYR+LP+
Sbjct: 72  ESYLKREAEHVEGFSPELAVVTHGGGKQL-AEPVVVRPTSETVIGEFMAKWIDSYRDLPL 130

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
            L ++ +V R E        +R   F   + H      +      +              
Sbjct: 131 LLNQWANVVRWELRP--RIFLRTSEFLWQEGHTAHATREDARAYARRI------------ 176

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
                              L +  E++M  VL          + T      GA      E
Sbjct: 177 -------------------LHEAYEDLMVNVL---GIPVVVGLKTARERFAGATATYTCE 214

Query: 481 YILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
            ++ D  G+  Q GT   +  N    F+  Y ++   + H        +G+  R +G +I
Sbjct: 215 GMMGD--GKALQLGTSHELGQNFAKAFDISYSSAEGGREHA---WTTSWGTSTRMLGGLI 269

Query: 540 ----ENFKGNLPLWLSPIQ--AIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET-IN 592
               ++    +P  L+P+Q   ++        E A+++ + L+   + +  D R +T   
Sbjct: 270 MCHGDDNGLRVPPKLAPVQAYVMIVKDGEGVGEAARKLHDALRDAGVRVALDDRTDTAFG 329

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
            +  +  ++  P+ +  G ++ +  +  + R    +     + D +
Sbjct: 330 RRAVDAELRGYPVRVEVGPRDLAAGNAVVVRRTDGSKAPTPVADVV 375


>gi|237807601|ref|YP_002892041.1| prolyl-tRNA synthetase [Tolumonas auensis DSM 9187]
 gi|259511628|sp|C4LBX6|SYP_TOLAT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|237499862|gb|ACQ92455.1| prolyl-tRNA synthetase [Tolumonas auensis DSM 9187]
          Length = 574

 Score =  154 bits (389), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 64/332 (19%), Positives = 121/332 (36%), Gaps = 19/332 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++   + + +R 
Sbjct: 3   TSQYLLSTLKETPNDAEVISHQLMLRAGMIRKLA---SGLYTWLPTGLRVLHKVEAIVRE 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E++ P V    LWQ+SG W+ Y   +  +     T +  R F L P +    
Sbjct: 60  EMNKAGAIEVSMPVVQPAELWQESGRWEQYGPELCRL-----TDRHNRPFVLGPTHEEVV 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT-KEQMFNE 403
            A+  + + SY++LP+ L +  + +R+E      G+MR R FT  DA+ F   KE +   
Sbjct: 115 TALVRYEVNSYKQLPLNLYQIQTKFRDEVRPRF-GVMRGREFTMKDAYSFHMNKESLIET 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             K+H    +I+   G +   V   T      GS      A +    +  + ++     +
Sbjct: 174 YGKMHQAYCNIFSRMGLDFRPVLADTGSIGGTGSHEFHVLANSGEDLIAFSTESDYAANV 233

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV---NSHSEKCHP 520
                L          E   K A         +     +  +     +       E+   
Sbjct: 234 EMAEALAPAGERPAPTESATKIATPNAHTIAEVSAYLKVAEQQTLKTLLVKGEEDEQGKA 293

Query: 521 VMIHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
            +I   + G  E     + E     +    +P
Sbjct: 294 GVIALVLRGDHE-----LNEIKAEKIAGVAAP 320



 Score = 94.1 bits (232), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 33/168 (19%), Positives = 66/168 (39%), Gaps = 13/168 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           + R  + G I Q+        NA  +   +E     ++    +G  + R +   IE NF 
Sbjct: 407 LKRGIEVGHIFQLGTKYSEAMNATVL---NEAGKATVMEMGCYGIGVTRVVAAAIEQNFD 463

Query: 544 GNLPLW---LSPIQAIVTTITSSAVEYAQEIA----NLLKSHHLSIETDFRNETINYKIR 596
               +W   ++P Q ++  +     E  QE+A    N L++  + +  D R E       
Sbjct: 464 DRGIIWTDSIAPFQVVIIPMNMHKSERVQELAERFYNELQAAGVEVLLDDRKERPGVMFA 523

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  +  IP  I+ GD+      +  +   S    +V++ + I  +  +
Sbjct: 524 DMELIGIPHSIVIGDRSIDNGVVEYKYRRSGDKTEVAIDEIIAKIKAQ 571


>gi|302897411|ref|XP_003047584.1| hypothetical protein NECHADRAFT_85892 [Nectria haematococca mpVI
           77-13-4]
 gi|256728515|gb|EEU41871.1| hypothetical protein NECHADRAFT_85892 [Nectria haematococca mpVI
           77-13-4]
          Length = 1097

 Score =  154 bits (388), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 69/375 (18%), Positives = 135/375 (36%), Gaps = 68/375 (18%)

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH 350
           Y+E+    V+   + +  G        +       D   D+   A++P +       ++ 
Sbjct: 30  YQEV----VVKAEMVEYYGEVA--GLFVLRPMTIGDKNLDV-PVAIRPTSEAIMYPYYSK 82

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHN 409
            ++S+R+LP+RL ++ SV R E        +R R F   + H    T+E+   E L+I  
Sbjct: 83  WIRSHRDLPLRLNQWNSVVRWETK-QTTPFLRTREFLWQEGHTAHLTEEEAGKEVLEILE 141

Query: 410 LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL 469
           L   IY+D     ++    T+ E+  G                                 
Sbjct: 142 LYAKIYEDLLAVPVVRGRKTKNERFAGG-------------------------------- 169

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
               +Y    E  +  + GR  Q  T   +  N    F+    +   E    V + +  +
Sbjct: 170 ----YYTMTLEGYIP-SNGRGIQGATSHCLGQNFSKMFDIAVQDPVGEGH--VHVWQNSW 222

Query: 529 GSIERFIGIMIENFKGNLPLWLSP----IQAIVTTIT----------SSAVEYAQEIANL 574
               R IG+M+     +  L L P    IQ ++  +           +  ++ A EI   
Sbjct: 223 AFSTRVIGVMVMIHGDDKGLVLPPRVAKIQVVIVPVGISKKTTAEEKNRLLDQADEIRAT 282

Query: 575 LK-SHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
           L+    L ++ D R   T   K  +  +K +P+ +  G K+A +  +   +  +     +
Sbjct: 283 LRNDARLRVDVDAREGYTPARKFNDWELKGVPLRLEFGPKDAKKGVVSYTKRYNNEKGTI 342

Query: 633 SLLDA---IPILTKE 644
            + +    +P + +E
Sbjct: 343 PIAEITTTVPKMLEE 357


>gi|313893443|ref|ZP_07827015.1| proline--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
 gi|313442084|gb|EFR60504.1| proline--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
          Length = 572

 Score =  154 bits (388), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 51/228 (22%), Positives = 95/228 (41%), Gaps = 10/228 (4%)

Query: 243 KRDHRKLAREMDLF--HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQV 299
             D   +++++ L    + +  +G+  +   GW+  + + + +R ++     +EI  P +
Sbjct: 15  PSDADVVSQQLMLRAGFMRKTANGLYSFLPLGWRSIKKIEAIVREEMDRASAQEIMMPIL 74

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               +W++SG W++Y A M  +    D       F L P +      +  + + SYR+LP
Sbjct: 75  QPAEIWKESGRWNAYGAEMMRINDRHDN-----EFCLGPTHEEIITTLVKNEINSYRQLP 129

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDF 418
           V L +  S +R+E     +GLMR R F   DA+ F   E    E  K +++    I+   
Sbjct: 130 VNLYQIQSKFRDERRPR-YGLMRSREFIMKDAYSFDVDEAGLEESYKSMYDAYTRIFNRC 188

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           G     V+  +      G+      AE     ++   K      I  G
Sbjct: 189 GLTFRPVEADSGAIGGSGTHEFMAIAEAGEADIVYCTKCDYAANIEIG 236



 Score = 70.6 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 17/152 (11%), Positives = 54/152 (35%), Gaps = 7/152 (4%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL---SPIQ 554
           +         A +++ +  + +P+++     G        + +    N  +W    +P +
Sbjct: 417 LGTKYSEALQATFLDQNG-RPNPMIMGCYGIGVSRTLAAAIEQYHDENGIIWPRSIAPFE 475

Query: 555 AIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
           A++  I     + +  ++ I + L+   + +  D R +    K ++  +   P+ I    
Sbjct: 476 AVIVPINAKDEALMSTSETIYSALQEAGVDVLLDDRKDRAGVKFKDADLIGYPLRITVSK 535

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
                  + I+   +      ++      +T+
Sbjct: 536 NTLENNEVEIQIRKTGEALSCAIDSVATKVTE 567


>gi|90417103|ref|ZP_01225031.1| prolyl-tRNA synthetase [marine gamma proteobacterium HTCC2207]
 gi|90331119|gb|EAS46375.1| prolyl-tRNA synthetase [marine gamma proteobacterium HTCC2207]
          Length = 574

 Score =  154 bits (388), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 56/315 (17%), Positives = 118/315 (37%), Gaps = 21/315 (6%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       ++E   H+ + R   +  +A   SG+  W   G ++F+ + + +R+
Sbjct: 3   ASQYLISTKKESPADAEVISHQLMLRAGMIRKVA---SGLYSWLPLGLRVFRKVEAIVRQ 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      EI  P V    LW +SG W  +   +  +K      +  R F L P +    
Sbjct: 60  EMDRSGALEIMMPVVQPADLWTESGRWGQFGPELLRIKD-----RHGREFCLGPTHEEVV 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + ++SY++LP    +  + +R+E      G+MR R F   DA+ F        E 
Sbjct: 115 TDIIRNEIRSYKQLPANFYQIQTKFRDERRPRF-GVMRTREFCMKDAYSFHVDSASLQET 173

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG---SDALWDDAENIMKGVLDTIKNSSQD 461
             +  +  +    F    ++ +        +G   S      A++    ++ + ++    
Sbjct: 174 YDL--MYQTYSAIFDRTGLVYRAVLADTGSIGGSVSHEFHVLADSGEDAIVFSSESDYAA 231

Query: 462 RINT--GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ--VDFNLPSRFNAFYVNSHSEK 517
            I     +   E A   P  E + + A         +   +D +      A  V++  E+
Sbjct: 232 NIEKADALAPSEAAL--PATETMAELATPGVHTIKQLCDFIDTSAEQTLKALIVSAEDEE 289

Query: 518 CHPVMIHRAVFGSIE 532
               +    + G  E
Sbjct: 290 GKTQLYGLMIRGDHE 304



 Score = 77.5 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 60/167 (35%), Gaps = 17/167 (10%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           I R  + G I Q+         A  ++ + +      +    +G  + R +   IE N  
Sbjct: 406 IKRGIEVGHIFQLGTKYSEAMKATVLDENGKDRA---MSMGCYGIGVSRIVAAAIEQNHD 462

Query: 544 GNLPLWL---SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIE-TDFRNETINYKI 595
            N  +W    +P Q  +  I    +    E  Q + + L S    +   D     +   +
Sbjct: 463 DNGIIWPESIAPFQVAIVPINMHKSERVAETCQTLYSKLVSAGYEVLFMDEPKARLGGML 522

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS---LLDAIP 639
            +  +  IP  I+ GD+  ++ ++  R       Q ++   L D I 
Sbjct: 523 ADIELIGIPHRIVIGDRGLADGNVEYRNRREHENQHIAMDKLDDFIA 569


>gi|331248340|ref|XP_003336794.1| hypothetical protein PGTG_18362 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gi|309315784|gb|EFP92375.1| hypothetical protein PGTG_18362 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 677

 Score =  154 bits (388), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 87/527 (16%), Positives = 177/527 (33%), Gaps = 82/527 (15%)

Query: 161 ILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRI 220
           + +S+   +++    + E        HV  T       K      A     +++P  S+ 
Sbjct: 91  LSDSLTDSDHIQCLEKTEIKIQKHTFHVPGTE--TVASKDTTAPKAKVPAQASKPAQSKE 148

Query: 221 YGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLI 280
            G     +  L         +    ++ + ++ D+     D SG        ++I++ + 
Sbjct: 149 TGG---DKSSLGISFKKESSTFGDWYQDVLKKGDMIDY-YDISGCYILKPASYRIWEIIQ 204

Query: 281 SYMRRKIKD-DYEEINTPQ-VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKP 338
            +   +IK    E    P  V  + L ++  H + +   +  V  A  +  +    A++P
Sbjct: 205 RWFDDRIKALGVENAYFPMFVSSRVLEKEKDHIEGFAPEVAWVTRAGQSELE-EHIAIRP 263

Query: 339 MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS--------LHGLMRVRGFTQDD 390
            +       +   ++SYR+LP++L ++ SV R E            +   +R R F   +
Sbjct: 264 TSETVMYPYYAKWIQSYRDLPLKLNQWNSVVRWEFKNPPDLSPIDLIEPFIRTREFLWQE 323

Query: 391 AHVFCT-KEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMK 449
            H     +E+   E  +I +L   +Y++                                
Sbjct: 324 GHTAHLHREEADLEVRQILDLYRGVYEEL------------------------------- 352

Query: 450 GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAF 509
                +       + +      G  Y    E  +  + GR  Q  T        S+    
Sbjct: 353 -----LAVPVTPGVKSEKEKFAGGLYTTTVEGFVPTS-GRGIQGATSHCLGQNFSKMFNI 406

Query: 510 YVNSHSEKCHP--------VMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI----QAIV 557
            V   S+   P        + + +  +G   R IG+M+     +  L L P     Q IV
Sbjct: 407 SVEDPSKPVDPNAGTQAEKLFVWQNSWGLSTRSIGVMVMVHADDKGLVLPPRVANLQVIV 466

Query: 558 TTIT----------SSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPII 606
             +               + ++++A  L+   +   TD R   T  +K     +K IP+ 
Sbjct: 467 IPVGIVASTGPESRKDLYDKSEDLAARLRKAGVLARTDIREGYTPGWKFNSWEMKGIPLR 526

Query: 607 IICGDKEASERSIGIRRFGSTTTQKVSLLDA---IPILTKESLPPDC 650
           +  G K+ + ++  + R  +   +   L      IP L  E++  D 
Sbjct: 527 LELGPKDLASQTTLVVRRDTGEKKSYPLETLDVEIPKLL-ETIQSDM 572


>gi|303313271|ref|XP_003066647.1| prolyl-tRNA synthetase, putative [Coccidioides posadasii C735 delta
           SOWgp]
 gi|240106309|gb|EER24502.1| prolyl-tRNA synthetase, putative [Coccidioides posadasii C735 delta
           SOWgp]
          Length = 603

 Score =  154 bits (388), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 82/419 (19%), Positives = 153/419 (36%), Gaps = 68/419 (16%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHL-WQQSGHWDSYRAN 317
            D SG        + I++ + S+   KIK    +  + P  + + +  ++  H + + A 
Sbjct: 116 YDVSGCFVLKPHSFFIWEEIQSWFNDKIKKMGVKNCSFPLFVSEDVLKKEKDHIEGFAAE 175

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           +  V  A  +  + +  A++P +       +   ++S+R+LP+RL ++ SV R E     
Sbjct: 176 VAWVTHAGSSELEKK-IAIRPTSETVMYPYYAKWIRSHRDLPLRLNQWNSVVRWEFKNP- 233

Query: 378 HGLMRVRGFTQDDAHVFCTKEQMFN-ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
              +R R F   + H     E     E L+I      +Y+      ++    T  EK  G
Sbjct: 234 QPFLRTREFLWQEGHTAHLTEAAAREEVLQILQHYAHVYEQLLAIPVIRGQKTDKEKFAG 293

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
                                                 Y    E  +  A GR  Q GT 
Sbjct: 294 G------------------------------------LYTTTVEGYIP-ATGRGIQGGTS 316

Query: 497 Q-VDFNLPSRFNAFYVNSHS---EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
             +  N    F     +  S   EK  P+ + +  +G   R IG+M+     N  L L P
Sbjct: 317 HGLGQNFSKMFGITVEDPTSKPDEKKPPLHVWQNSWGLSTRTIGVMVMVHSDNRGLVLPP 376

Query: 553 ----IQAIVTTIT----------SSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIRE 597
               +Q ++  +           +S       +A++L++  + +E D R   +  +K  +
Sbjct: 377 RVADVQTVIVPVGLTAKTPDDVRASINAEIDHLASVLEAAGIRVEIDKREGYSPGWKFND 436

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRF---GSTTTQKVSLLD---AIPILTKESLPPDC 650
             +K IP+ +  G  E+S   +   R    G      + + +   A+P L  E++  D 
Sbjct: 437 WELKGIPLRLEFGPGESSGGFVTTSRRDIPGKEGKSTIPIAELATAVPALL-ETIQADL 494


>gi|119470323|ref|ZP_01613082.1| prolyl-tRNA synthetase [Alteromonadales bacterium TW-7]
 gi|119446495|gb|EAW27770.1| prolyl-tRNA synthetase [Alteromonadales bacterium TW-7]
          Length = 574

 Score =  154 bits (388), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 52/248 (20%), Positives = 96/248 (38%), Gaps = 11/248 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L        ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYILATLKETPSDAEIVSHQLMLRAGMIRRVA---SGLYTWLPSGLRVLRKVENIVRE 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P +    LW++SG W  +   +        T +  R FAL P +    
Sbjct: 60  EMDKAGAIEMLMPVIQPADLWEESGRWSEFGPELMRF-----TDRHNREFALGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
                  + SY++LP+ L +  +  R+E      G+MR R FT  DA+ F   E+  N  
Sbjct: 115 TDFVRKEVNSYKQLPLTLYQVQTKVRDERRPRF-GVMRAREFTMKDAYSFHLSEECLNNT 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            + +H    +I++  G +   V   T       S      AE+    +  +  +     I
Sbjct: 174 YQAMHKAYCNIFERLGLDYRPVIADTGSIGGSVSHEFHVLAESGEDAIAFSDGSDYAANI 233

Query: 464 NTGVLLGE 471
                L  
Sbjct: 234 EKAEALAP 241



 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 24/166 (14%), Positives = 55/166 (33%), Gaps = 13/166 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           I R  + G I Q+         A  +N   +     ++    +G  + R +   IE    
Sbjct: 407 IKRGVEVGHIFQLGTKYSEAMKAGVLNEDGKNQ---VMTMGCYGVGVSRIVAAAIEQNND 463

Query: 545 NLPL-WL---SPIQAIVTTITSSAV----EYAQEIANLLKSHHLSIETDFRNETINYKIR 596
              + W    +P    +  +         + A  +   LK   + +  D R E       
Sbjct: 464 KYGIIWPQSIAPFDLAIVPMNMHKSHRIPDIANSLYQGLKDAGVDVLFDDRKERPGVMFN 523

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +  +  +P  ++ G++   E  + ++   +     + +  AI  + 
Sbjct: 524 DMELVGVPFTLVIGERNLDENKVELKNRRTGEKLMIDIDTAIESIK 569


>gi|198283898|ref|YP_002220219.1| prolyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218666412|ref|YP_002426532.1| prolyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 23270]
 gi|226731419|sp|B7J4Y9|SYP_ACIF2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226731420|sp|B5EKH7|SYP_ACIF5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|198248419|gb|ACH84012.1| prolyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218518625|gb|ACK79211.1| prolyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 23270]
          Length = 570

 Score =  154 bits (388), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 48/221 (21%), Positives = 84/221 (38%), Gaps = 11/221 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  +        E+E   H+ L R   +  +A   SG+  W   G ++ + +   +R 
Sbjct: 3   ASQIFIPTLKETPAEAELVSHQLLLRGGFIRRLA---SGLYTWMPLGLRVLRKVERVVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +E+  P V    LWQ+SG W+ Y   +  ++   D     R F L P +    
Sbjct: 60  EMDRSGAQELLMPVVQPAELWQESGRWEQYGPELLRLRDRHD-----REFCLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SYR+LPV   +  + +R+E      GLMR R F   DA+ F          
Sbjct: 115 SDLARREIHSYRQLPVNFYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSFHMDHSSLEIT 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
            + ++     ++   G     V+          S      A
Sbjct: 174 YQAMYEAYQRVFTRLGLSFRAVEADNGAIGGKRSHEFHVLA 214



 Score = 66.0 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 56/167 (33%), Gaps = 9/167 (5%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           +I R  + G + Q+            ++        V +     G        + ++F  
Sbjct: 401 SIRRGIEVGHVFQLGERYSESMGITVLDETGRDAT-VTMGCYGIGVSRVVAAAVEQHFDD 459

Query: 545 NLPLW---LSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
              +W   L+P +  +  I    +      AQ + + L++   S+  D R+E    +   
Sbjct: 460 RGIIWPVALAPFEVGIVAINARKSPDVAAAAQALHDRLEAEGYSVLLDDRDERPGVQFAT 519

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
             +  +P  I+  D   ++     R   +T    +     +  L KE
Sbjct: 520 MDLVGLPHRIVVSDTVLAQGVWEYRARRTTENVLLDETQLMERLRKE 566


>gi|207721477|ref|YP_002251917.1| prolyl-trna synthetase protein [Ralstonia solanacearum MolK2]
 gi|206586637|emb|CAQ17223.1| prolyl-trna synthetase protein [Ralstonia solanacearum MolK2]
          Length = 574

 Score =  154 bits (388), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 57/301 (18%), Positives = 112/301 (37%), Gaps = 13/301 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       ++E   H+ + R   +  +   G+G+  +   G +  + +   +R 
Sbjct: 3   ASQFFISTLKEAPADAEIVSHKLMMRAGMIKKL---GAGIYTYMPVGLRAIRKVEQIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LWQ++G WD     +  VK      +  R   ++P +    
Sbjct: 60  EMNAAGAVEMLMPVVQPGELWQETGRWDKMGEELMRVKD-----RHERDLVIQPTSEEVV 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
             +    ++SY+++PV   +  + +R+E      G+MR R FT  DA+ F    E M   
Sbjct: 115 TDIARTEIRSYKQMPVNFYQIQNKFRDERRPRF-GIMRGREFTMKDAYSFDRDVEGMKVS 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             K+ +    I++ FG     V          GS      AE     ++ + ++     I
Sbjct: 174 YQKMFDAYTRIFQRFGLAFRAVAADNGAIGGSGSHEFHVIAETGEDAIVYSPESDYAANI 233

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI--QVDFNLPSRFNAFYVNSHSEKCHPV 521
                L   A   P  E + K       +C  +  Q+   L     +  +    +   P 
Sbjct: 234 EAAEALVPAAPRSPAAEPLAKTPTPGRAKCEAVAEQLGIALQRTVKSIVLAKDVDGGEPQ 293

Query: 522 M 522
           +
Sbjct: 294 I 294



 Score = 74.8 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 21/148 (14%), Positives = 56/148 (37%), Gaps = 11/148 (7%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G +  +        +A +++ +  K  P+++     G I R +G  IE       
Sbjct: 409 RGIEVGHVFMLGTRYSESMSATFLDENG-KTQPMVMGCYGIG-ITRILGAAIEQNYDARG 466

Query: 546 --LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
              P+ ++P + ++  +    + +    A  +   L +  + +  D R E       +  
Sbjct: 467 IIWPVSIAPFEVVICPVGYDRSEAVRAEADRLHAELVAAGIDVILDDRGERPGVMFADWE 526

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGST 627
           +  +P  ++ G++   E  + ++     
Sbjct: 527 LIGVPFRVVVGERGLKEGKLELQGRRDE 554


>gi|51102318|gb|AAT95872.1| prolyl-tRNA synthetase [Entamoeba moshkovskii]
          Length = 410

 Score =  154 bits (388), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 66/398 (16%), Positives = 140/398 (35%), Gaps = 55/398 (13%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEI--NTPQVLDQHLWQQSGHWDSYRAN 317
            D SG        + I++ +  ++  +IK    E       V    L ++    + +   
Sbjct: 13  YDISGCYILRPPAYGIWENIQQFIDARIKRMGVENAYFPCFVSQATLKKEEDELNGFTPE 72

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           +  V  +  T       AL+P +       F + +  +R+LP+++ ++ +V R E S   
Sbjct: 73  VAWVTKSGQTDLQ-EPIALRPTSETIIYPAFKNWISGHRDLPMKVNQWCNVVRWEFSHP- 130

Query: 378 HGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
           +  +R R F   + H  F  + +   EC +I  L  S+Y+D     ++    ++ E    
Sbjct: 131 YPFIRTREFLWQEGHTAFSNQPEAEKECHEIMELYASVYEDLLAVPVIRGKKSKGETF-- 188

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
                                              GA+Y    E I+           + 
Sbjct: 189 ----------------------------------PGAYYSLTVECIVPTNGRSIQAATSH 214

Query: 497 QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI--- 553
            +       F+  + +  ++K    +  +  +G   R IG+ +     N  + + P    
Sbjct: 215 HLGQTFSKLFDIEFEDESNKKQ---LAWQNSWGLSTRSIGVTVMTHGDNKGVVIPPRAAQ 271

Query: 554 -QAIVTTI------TSSAVEYAQEIANLLKSHHLSIETDFRN-ETINYKIREHSIKKIPI 605
            Q ++ T+             A E++ LL  + +    D  +     +K  E+ ++ IPI
Sbjct: 272 KQVVIITLHHKGSPNDEMDTKAVELSQLLLDNGIRAFADTNDMHKPGWKFSEYEMRGIPI 331

Query: 606 IIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            I  G ++   + + I R  +    + S  + +  + K
Sbjct: 332 RIELGPRDYDGKKVVIVRRDNGAKTESSWDNLVETIKK 369


>gi|83282659|ref|XP_729866.1| prolyl-tRNA synthetase [Plasmodium yoelii yoelii str. 17XNL]
 gi|23488909|gb|EAA21431.1| prolyl-tRNA synthetase, putative [Plasmodium yoelii yoelii]
          Length = 728

 Score =  154 bits (388), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 94/536 (17%), Positives = 178/536 (33%), Gaps = 80/536 (14%)

Query: 124 KKMQEIIARD-SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR------Q 176
           K M E+I      +   Y+      +  +      +   L      EN  + R      +
Sbjct: 136 KNMDEVIIHPMHNYSCIYVKTTDVIKYCDLHNHTPEFINLSDSKDTENQNIKRDDSNINE 195

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
               D  + PH  +    K      K+       D +      I G     +Q  + +  
Sbjct: 196 ESSKDTAKLPHGENN-NNKHGKNDDKINDRDKGKDGSN-----ILGITSKKEQNFSDWYT 249

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEIN- 295
            +         +L    D+       SG        + I++ + ++   +IK    E + 
Sbjct: 250 QVIVK-----SELIEYYDI-------SGCYILRPASYYIWECIQTFFNNEIKKLDVENSY 297

Query: 296 -TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
               V    L ++  H + +   +  V    DT       A++P +     +VF+  ++S
Sbjct: 298 FPLFVTKNKLEKEKNHIEGFSPEVAWVTKYGDTNLP-EEIAIRPTSETIMYSVFSKWIRS 356

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           +R+LP++L ++ +V R E        +R R F   + H     E+   E +K+   I+ I
Sbjct: 357 HRDLPLKLNQWNTVVRWEFKQPT-PFIRTREFLWQEGHTAHKNEE---EAVKMVFDILDI 412

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           Y+                        W +         + +       I +      GA 
Sbjct: 413 YRR-----------------------WYE---------ECLAVPVIKGIKSEGEKFGGAN 440

Query: 475 YGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           +    E  + ++ GR  Q  T      N    F   + +    K     +H+  +G   R
Sbjct: 441 FTSTNETFISES-GRAIQAATSHYLGTNFAKMFKIEFEDEQENKQ---FVHQTSWGCTTR 496

Query: 534 FIGIMIENFKGNLPLWLSP----IQAIVTTITSSAVE------YAQEIANLLKSHHLSIE 583
            IG+MI     N  L L P     + ++  I     +      Y ++I  +LK+  ++  
Sbjct: 497 SIGVMIMMHSDNKGLILPPNVAKYKVVIVPILYKNTDETAIFNYCKDIEKVLKNAQINCV 556

Query: 584 TDFRN-ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
            D R+  +  YK     ++ IPI I  G K+    S    R  +     +     +
Sbjct: 557 FDDRDLYSPGYKFNHWELRGIPIRIEVGPKDIQNNSCVFVRRDNNQKFNIKKESVL 612


>gi|311280836|ref|YP_003943067.1| prolyl-tRNA synthetase [Enterobacter cloacae SCF1]
 gi|308750031|gb|ADO49783.1| prolyl-tRNA synthetase [Enterobacter cloacae SCF1]
          Length = 572

 Score =  154 bits (388), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 53/250 (21%), Positives = 100/250 (40%), Gaps = 11/250 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGVRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E+  P V    LWQ+SG W+ Y   +  +    D     R F L P +    
Sbjct: 60  EMNNAGAIEVLMPVVQPSELWQESGRWEQYGPELLRIADRGD-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLIRNELNSYKQLPLNFYQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHTSQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   G +   V+  T       S      A++    V+ +  +     I
Sbjct: 174 YDAMYTAYSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVIFSDTSDYAANI 233

Query: 464 NTGVLLGEGA 473
                L   A
Sbjct: 234 EFAEALAPSA 243



 Score = 85.6 bits (210), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 58/177 (32%), Gaps = 13/177 (7%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
           P  +      I R  + G I Q+        NA             ++    +G  + R 
Sbjct: 395 PSPDGQGTLMIKRGIEVGHIFQLGTKYSQAMNAAVQGEDG---RNQILTMGCYGIGVTRV 451

Query: 535 IGIMIENFKGN----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDF 586
           +   IE          P  ++P Q  +  +         E A+++   L++  + +  D 
Sbjct: 452 VAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSYRVQELAEKLYAELRAQGIEVLMDD 511

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           R E       +  +  IP  ++ GD+      I  +   +   Q +   D +  L K
Sbjct: 512 RKERPGVMFADMELIGIPHTVVIGDRNLDNDDIEYKYRRNGDKQLIKTGDILDYLVK 568


>gi|303284080|ref|XP_003061331.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226457682|gb|EEH54981.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 489

 Score =  154 bits (388), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 65/415 (15%), Positives = 145/415 (34%), Gaps = 71/415 (17%)

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEE-INTPQVLD 301
            R +  + RE +L         ++     G+ +++ +  +M  K K    E    PQ++ 
Sbjct: 9   SRWYLDVIRECELADYGPARGTMVI-RPYGYALWEGIQRWMDAKFKTTGVENAYFPQLIP 67

Query: 302 QHL-WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
                +++ H + +   +  V        +     ++P +      +F+  ++SYR+LP+
Sbjct: 68  YSFITKEASHVEGFSPELAVVTQGGGKTLE-EPLVVRPTSETIVNHMFSQWIQSYRDLPL 126

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA-HVFCTKEQMFNECLKIHNLIISIYKDFG 419
            + ++ +V+R E        +R   F   +      T E+     +++ ++     +D  
Sbjct: 127 LMNQWANVHRWEMR--TRPFIRTLEFLWQEGHTAHATAEEAEERAVQMIDVYREFAEDVA 184

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
              ++V   +R E   G                                    A      
Sbjct: 185 AMPVIVGRKSRVETFAG------------------------------------ANNTYTI 208

Query: 480 EYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           E ++ D   R  Q GT   +  N    F+  +++ + +  H   +H++ +G   R IG +
Sbjct: 209 EAMMGD--KRALQAGTSHNLGQNFAKAFDTTFLDENGKTQH---VHQSSWGVSTRLIGGI 263

Query: 539 IENFKGNL---------------PLWLSPIQAIVTTITSSAVEY------AQEIANLLKS 577
           I     ++               P  L+PIQ +V  I     +       A  +   L  
Sbjct: 264 IMTHGDDVGLRRVLYTGPHTTALPPALAPIQVVVVPIAQKNKDKESVNAAASAVVKTLTD 323

Query: 578 HHLSIETDFRN-ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
             + ++ D     +  +K  +  +K +PI +  G K+ +  +  + R      + 
Sbjct: 324 AGVRVKLDDDERNSPGWKFAQWEMKGVPIRVEIGPKDVANDACVLARRDKPGKEG 378


>gi|121535634|ref|ZP_01667440.1| TGS domain protein [Thermosinus carboxydivorans Nor1]
 gi|121305804|gb|EAX46740.1| TGS domain protein [Thermosinus carboxydivorans Nor1]
          Length = 136

 Score =  154 bits (388), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 48/133 (36%), Positives = 78/133 (58%), Gaps = 1/133 (0%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
           S +++   DG+I+      T   +AESISR LAK A+   ++G+V DL+  + +G  +E 
Sbjct: 2   SKLQIILKDGAIREVEPGTTLMQLAESISRGLAKSALVAKLDGQVVDLAYRLNKGGKVEF 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +T ED      +RHS +HI+A+AV+ ++ +V++ IGP I  GFYYDFD    F+ D+L +
Sbjct: 62  LTFEDEEGKGALRHSASHILAQAVKRLYGDVKLGIGPAIATGFYYDFDTTHTFTPDDLEK 121

Query: 122 IEKKMQEIIARDS 134
           I+    +      
Sbjct: 122 IQDVNGKDCEGRY 134


>gi|269115191|ref|YP_003302954.1| Prolyl-tRNA synthetase [Mycoplasma hominis]
 gi|268322816|emb|CAX37551.1| Prolyl-tRNA synthetase [Mycoplasma hominis ATCC 23114]
          Length = 477

 Score =  154 bits (388), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 68/412 (16%), Positives = 144/412 (34%), Gaps = 57/412 (13%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINT 296
             E   R +  + +  DL        G I +    + I++ + + M  + K    + +  
Sbjct: 10  QNEDFARWYTDVIQNGDLMAYGATK-GCIIFKPLAYSIWENIQAKMDIEFKKRGVQNVYL 68

Query: 297 PQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P ++ + L  ++  H + +   +  V       K    F ++P +      +F + + SY
Sbjct: 69  PLLIPESLLQKEKNHVEGFNPELATVTEVGGK-KLAEKFFIRPTSETLFADLFKNEVSSY 127

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISI 414
            +LP+   ++ +V R E   + +  +R R F   + H    + E+       +H +   +
Sbjct: 128 NDLPIIYNQWVNVLRWEK--TTNPFLRTREFLWQEGHTIHSSSEEAIEFAKTMHKVYKDV 185

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            +                                    + +     +   T      GA 
Sbjct: 186 IE------------------------------------ENLAIPVVEGCKTDHEKFAGAD 209

Query: 475 YGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
                E ++KD  G+  Q GT      N    F+  + N+ ++  +P   +   +G+  R
Sbjct: 210 ITYTLESMMKD--GKALQSGTSHYLGQNFTKAFDITFKNNENKLINP---YGTSWGTTTR 264

Query: 534 FIGIMIENFKGN----LPLWLSPIQAIVTTITSSAVEYAQEIANLLKSH----HLSIETD 585
            IG +I     +    +P  ++  Q  +  I +S  E   ++A  LK      ++    D
Sbjct: 265 LIGALIMTHGDDRGIIIPPKIARTQVDILEIFNSKDERVHKLALELKDALLAKNIVANID 324

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
             N+   +K     I   P+ I  G K+    S+   R  +      ++ +A
Sbjct: 325 SSNKGPGFKAANSEIHGTPLRIEIGPKDIENNSVLFVRRDNLEKITSTIAEA 376


>gi|218249438|ref|YP_002374917.1| prolyl-tRNA synthetase [Borrelia burgdorferi ZS7]
 gi|226321716|ref|ZP_03797242.1| prolyl-tRNA synthetase [Borrelia burgdorferi Bol26]
 gi|259511576|sp|B7J1X2|SYP_BORBZ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|218164626|gb|ACK74687.1| prolyl-tRNA synthetase [Borrelia burgdorferi ZS7]
 gi|226232905|gb|EEH31658.1| prolyl-tRNA synthetase [Borrelia burgdorferi Bol26]
          Length = 488

 Score =  154 bits (388), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 75/431 (17%), Positives = 156/431 (36%), Gaps = 61/431 (14%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
           ++ ++   E+   + +  + ++  L   +     ++     G+ I+  + S + +K K+ 
Sbjct: 1   MSDFIASKEDDYSKWYLDIVQKAKLADYSPVKGCMVI-MPYGYSIWSKIQSILDKKFKET 59

Query: 290 DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
            +E    P ++     + +  H D +      +K A           L+P +      ++
Sbjct: 60  GHENAYFPMLIPYSFLEREKDHIDGFSPEFAIIKDAGGESL-AEPLVLRPTSETIIWNMY 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
           +  +KSYR+LP+++ ++ +V R E        +R   F   + H   T      E L+  
Sbjct: 119 SKWIKSYRDLPLKINQWANVVRWEKR--TRPFLRTTEFLWQEGH---TAHATEEEALEET 173

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
            LI+ +YK F                          E+ +   +   K S +++      
Sbjct: 174 LLILDVYKRF-------------------------IEDYLAIPVFCGKKSEKEKF----- 203

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAV 527
              GA      E +++D   +  Q  T      N    F+  + +   +  H   +  + 
Sbjct: 204 --AGAVSTYSIEALMQD--KKALQAATSHYLGLNFAKAFDVKFQDKDGKMRH---VFASS 256

Query: 528 FGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTT-------ITSSAVEYAQEIANLLK 576
           +G   R IG +I    +     LP  ++PI+ IV         I    ++Y   + + LK
Sbjct: 257 WGVSTRLIGALIMVHSDEKGLVLPPRIAPIEIIVIPIFKKEDEINKKILDYCDCVVDALK 316

Query: 577 SHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT--TQKVS 633
                +E D     +  ++      K IPI +  G  +    S+ I R         ++S
Sbjct: 317 KAGFRVEIDKDVRSSPGFRFSSAEFKGIPIRLEVGINDVLLNSVTISRRDKDRKFKYQIS 376

Query: 634 LLDAIPILTKE 644
           L   +  +  E
Sbjct: 377 LDSLVSKVKVE 387


>gi|325298988|ref|YP_004258905.1| uridine kinase [Bacteroides salanitronis DSM 18170]
 gi|324318541|gb|ADY36432.1| uridine kinase [Bacteroides salanitronis DSM 18170]
          Length = 554

 Score =  154 bits (388), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 50/232 (21%), Positives = 98/232 (42%), Gaps = 2/232 (0%)

Query: 12  GSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSL 70
              ++FP  +   ++ +    ++    V+  +N KV DL+  V     +E +   +P  +
Sbjct: 10  NQTRSFPEGSNLLEIYKGFGLNMPYGVVSAKVNNKVEDLNFRVYYNKDVEFLDVTNPSGM 69

Query: 71  AVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEII 130
                S   I+A+AV+ ++P+  +++   +  G+Y D   ++    D++ +I+++MQEII
Sbjct: 70  RTYFRSLCFILAKAVEDLYPQGSISLEHPVSKGYYCDLHLDRSIGLDDVIRIKQRMQEII 129

Query: 131 ARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRS 190
             D PF +      +A E+F       K ++L +   +     YR G   D   G  V S
Sbjct: 130 DADIPFQRIECHTAQAAEMFLHHGMMDKAKLLRTY-DQLYTFYYRLGNTTDCYYGSLVPS 188

Query: 191 TGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           TG ++ F  +    G   R  + +               E+ Q  +   E  
Sbjct: 189 TGYIRLFDIVKYYDGLLLRVPNRKDPTRLEDVVKQEKMLEVFQEYHRWNEIM 240


>gi|269797927|ref|YP_003311827.1| prolyl-tRNA synthetase [Veillonella parvula DSM 2008]
 gi|269094556|gb|ACZ24547.1| prolyl-tRNA synthetase [Veillonella parvula DSM 2008]
          Length = 572

 Score =  154 bits (388), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 52/228 (22%), Positives = 96/228 (42%), Gaps = 10/228 (4%)

Query: 243 KRDHRKLAREMDLF--HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTPQV 299
             D   +++++ L    + +  +G+  +   GWK  + + + +R ++     +EI  P +
Sbjct: 15  PSDADVVSQQLMLRAGFMRKTANGLYSFLPLGWKSIKKIEAIVREEMDRASAQEIMMPIL 74

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               +W++SG W++Y A M  +    D       F L P +      +  + + SYR+LP
Sbjct: 75  QPAEIWKESGRWNAYGAEMMRINDRHDN-----EFCLGPTHEEMITTLVKNEINSYRQLP 129

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDF 418
           V L +  S +R+E     +GLMR R F   DA+ F   E   +E  K +++    I+   
Sbjct: 130 VNLYQIQSKFRDERRPR-YGLMRSREFIMKDAYSFDIDEAGLDESYKSMYDAYTRIFTRC 188

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           G     V+  +      G+      AE     ++   K      I  G
Sbjct: 189 GLTFRPVEADSGAIGGSGTHEFMAIAEAGEADIVYCTKCDYAANIEIG 236



 Score = 71.4 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 24/174 (13%), Positives = 62/174 (35%), Gaps = 8/174 (4%)

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
            PK    L+ A G +      ++         A +++ +  + +P+++     G      
Sbjct: 396 CPKCGGALEHAKGIEV-GQVFKLGTKYSEALQATFLDQNG-RPNPMIMGCYGIGVSRTLA 453

Query: 536 GIMIENFKGNLPLWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNE 589
             + +    N  +W    +P +A++  I     + +  +Q I   L++  + +  D R +
Sbjct: 454 AAIEQYHDENGIIWPRSIAPFEAVIVPINAKDEALMATSQTIYTALQNAGVDVLLDDRKD 513

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
               K ++  +   P+ I           + I+   S      ++      +T+
Sbjct: 514 RAGVKFKDADLIGYPLRITVSKNTLENNEVEIQIRKSGEALPCAIDSVADKVTE 567


>gi|77554944|gb|ABA97740.1| Bifunctional aminoacyl-tRNA synthetase, putative, expressed [Oryza
           sativa Japonica Group]
          Length = 489

 Score =  154 bits (388), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 69/424 (16%), Positives = 145/424 (34%), Gaps = 65/424 (15%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
            ++      Y  +++    + ++    ++     D SG         +I++ L  +   +
Sbjct: 22  KKETKLGMAYKKDDNFGEWYSEVVVNSEMIEY-YDISGCYILRPWAMEIWELLKEFFDAE 80

Query: 287 I------KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
           I         +    T  VL     ++  H + +   +  V  +  +  +    A++P +
Sbjct: 81  IKKLKLKPYYFPLFVTENVLQ----KEKDHIEGFAPEVAWVTKSGKSDLEA-PIAIRPTS 135

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQ 399
                  F+  ++S+R+LP+R  ++ +V R E S      +R R F   + H  F TKE+
Sbjct: 136 ETVMYPYFSKWIRSHRDLPLRCNQWCNVVRWEFSNPT-PFIRSREFLWQEGHTAFATKEE 194

Query: 400 MFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSS 459
              E L+I  L   IY++F    +     +  EK  G                       
Sbjct: 195 ADEEVLQILELYRRIYEEFLAVPVSKGRKSEMEKFAGG---------------------- 232

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
                          Y    E  + +  GR  Q  T        ++   F +   ++K  
Sbjct: 233 --------------LYTTSVEAFIPNT-GRGVQGATSHCLGQNFAKM--FDITFENDKGS 275

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH 579
             M+ +  +    R IG+M+     +               T++ V   ++    L+   
Sbjct: 276 RSMVWQNSWAYTTRSIGVMVMTHGDDKD-----------VDTTAIVNECKKTVETLEKAG 324

Query: 580 LSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           +  + D R N +  +K     +K +P+ I  G K+ +     + R  +     +   D +
Sbjct: 325 IRADLDTRENYSPGWKYSHWEMKGVPLRIEIGPKDMANNQARVVRRDNGAKADIPTADLV 384

Query: 639 PILT 642
             + 
Sbjct: 385 EKVN 388


>gi|83814638|ref|YP_446639.1| prolyl-tRNA synthetase [Salinibacter ruber DSM 13855]
 gi|83756032|gb|ABC44145.1| prolyl-tRNA synthetase [Salinibacter ruber DSM 13855]
          Length = 527

 Score =  154 bits (388), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 62/453 (13%), Positives = 155/453 (34%), Gaps = 69/453 (15%)

Query: 217 LSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIF 276
           + R + T      ++   +   +E   + ++ + R   L   +     +I     G  ++
Sbjct: 24  VRRSFFTGPQRPDDMADAVTPRDEDYSQWYQDVVRNGQLAENSPARGCMII-KPNGMALW 82

Query: 277 QTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKC----------- 323
           + +   + +  KD  ++    P  + +   + ++ H + +      V             
Sbjct: 83  ENMRDQLDQMFKDTGHQNYYFPLFIPERYMEREAEHVEGFAKECAVVTHSRLTQDEEGDL 142

Query: 324 -ADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMR 382
             D   +    + ++P +       ++  ++SYR+LP+   ++ +V R E    L   +R
Sbjct: 143 VPDPESELGENYIVRPTSETIIWDTYSKWIQSYRDLPLLYNQWANVVRWEMRPRL--FLR 200

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWD 442
              F   + H   T      E ++    ++ +Y  F                        
Sbjct: 201 TAEFLWQEGH---TAHATETEAVEEAERMLDVYTTF------------------------ 233

Query: 443 DAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFN 501
                     + +         T      GA      E +++D  G+  Q GT   +  N
Sbjct: 234 --------AEEYMAMPVLQGRKTESERFPGAVDTYCIEAMMQD--GKALQAGTSHFLGQN 283

Query: 502 LPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNL----PLWLSPIQAIV 557
               F+  + N  +E+ +   +    +G   R IG +I     +     P  L+P Q ++
Sbjct: 284 FAKAFDCTFTNEDNEEEY---VWATSWGVSTRLIGGLIMTHSDDQGLVLPPKLAPHQVVI 340

Query: 558 TTITSS------AVEYAQEIANLLKSHHLSIETD-FRNETINYKIREHSIKKIPIIIICG 610
             +          +E  + +   L+ H + ++ D    ++  ++  EH ++ +P+ +  G
Sbjct: 341 VPLFFDDDQEGPVMETCERLQERLEDHGIRVKMDQNHTQSPGWRFSEHELRGVPLRLAIG 400

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            ++    ++ + R  +   + V        ++ 
Sbjct: 401 PRDLENDNVEMARRDTQEKEVVPQDGIAERVSD 433


>gi|312091207|ref|XP_003146898.1| hypothetical protein LOAG_11329 [Loa loa]
 gi|307757937|gb|EFO17171.1| hypothetical protein LOAG_11329 [Loa loa]
          Length = 574

 Score =  154 bits (388), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 80/429 (18%), Positives = 150/429 (34%), Gaps = 61/429 (14%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            T+Q         EE+    + ++  + D+     D SG        + I++ +  +   
Sbjct: 70  TTKQTKLGLDVKKEENLAEWYSQIIVKADMIEY-YDVSGCYILRPWSFAIWEIIKKWFDT 128

Query: 286 KIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPG 343
           +IK         P  + Q+  Q +  H   +   +  +  A ++       A++P +   
Sbjct: 129 EIKKLGVRNCYFPIFVSQNALQREKEHIADFAPEVAWITRAGNSEL-SEPIAIRPTSETV 187

Query: 344 HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFN 402
               +   ++SYR+LP+RL ++ +V R E        +R R F   + H  F TK++  N
Sbjct: 188 IYPSYAKWIQSYRDLPLRLNQWCNVVRWEFKHPT-PFLRTREFLWQEGHTAFQTKQEAEN 246

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
           E   I +L   +Y D     +     +  EK  G D                        
Sbjct: 247 EVFIILDLYAKVYTDLLAIPVTKGRKSEKEKFAGGD------------------------ 282

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPV 521
                       +    E  +    GR  Q  T   +  N    F+  +     E     
Sbjct: 283 ------------FTTTVEAYVP-VNGRGIQGATSHHLGQNFSKMFDISF--EDPESGAKT 327

Query: 522 MIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTT----------ITSSAVEY 567
              +  +G   R IG MI    +N    LP  ++PIQ I+            I       
Sbjct: 328 FAWQNSWGMTTRTIGAMIMIHSDNDGLVLPPRVAPIQVIIIPVGITSQMDKQIKQEIFIK 387

Query: 568 AQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS 626
           A+EI  +L++  + ++TD R+  +  +K     +K +PI +  G K+  +  +      +
Sbjct: 388 AEEIMRILENSRIRVDTDLRDNYSPGWKFNHWELKGVPIRLELGPKDIKKSQVTCVIRYN 447

Query: 627 TTTQKVSLL 635
                + + 
Sbjct: 448 RQKSVIPID 456


>gi|221061291|ref|XP_002262215.1| bi-functional aminoacyl-trna synthetase [Plasmodium knowlesi strain
           H]
 gi|193811365|emb|CAQ42093.1| bi-functional aminoacyl-trna synthetase,putative [Plasmodium
           knowlesi strain H]
          Length = 715

 Score =  153 bits (387), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 81/522 (15%), Positives = 165/522 (31%), Gaps = 67/522 (12%)

Query: 141 LSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR-GPHVRSTGQVKKFFK 199
              E   +L+  ++      I+       +    +Q +    C    H      +++   
Sbjct: 121 CDQENLVKLYFDEELKNMENIIVHPMHNYSSLYMKQEDVVKFCELHNHAPEYIHIEEGQN 180

Query: 200 LMKVAGAYWRGDSNRPML--------SRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAR 251
            MK    +                               +   +     +    + ++  
Sbjct: 181 KMKKEDMHLEEQKMEKQKGTNAGGSGGNAGKDDNAKDANILGIVAKKTVNFSEWYTQVIV 240

Query: 252 EMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEIN--TPQVLDQHLWQQSG 309
           + +L     D SG        + I++ L ++  ++IK    E +     V    L ++  
Sbjct: 241 KSELIEY-YDISGCYILRPASYYIWECLQTFFNKEIKKLDVENSYFPLFVTKNKLEKEKN 299

Query: 310 HWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVY 369
           H + +   +  V    D+       A++P +     +VF+  ++S+R+LP++L ++ +V 
Sbjct: 300 HIEGFSPEVAWVTKYGDSTLP-EEIAIRPTSETIMYSVFSKWIRSHRDLPLKLNQWNTVV 358

Query: 370 RNEPSGSLHGLMRVRGFTQDDAHVFCT-KEQMFNECLKIHNLIISIYKDFGFEKIMVKLS 428
           R E        +R R F   + H     +E+       I +L    Y+            
Sbjct: 359 RWEFKQPT-PFIRTREFLWQEGHTAHKNEEEAVKMVFDILDLYRRWYE------------ 405

Query: 429 TRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIG 488
                                   + +       I +      GA +    E       G
Sbjct: 406 ------------------------ECLAVPIIKGIKSEGEKFGGANFTSTAE-AFISENG 440

Query: 489 RDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  Q  T      N    F   + + + +K +   +H+  +G   R IGIMI     +  
Sbjct: 441 RAIQAATSHYLGTNFAKMFKIEFEDENEKKQY---VHQTSWGCTTRSIGIMIMTHGDDKG 497

Query: 548 LWLSPI----QAIVTTITSSAVE------YAQEIANLLKSHHLSIETDFRN-ETINYKIR 596
           L L P     + ++  I     +      Y ++I  +LK+  ++   D R   +  YK  
Sbjct: 498 LVLPPKVAKFKVVIVPILYKNTDENVIFNYCKDIEKVLKNAQINCILDDRELYSPGYKFN 557

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
              ++ +PI I  G K+    S    R  +     V     +
Sbjct: 558 HWELRGVPIRIEVGPKDIQNNSCLFVRRDTNEKFNVKKESVL 599


>gi|326499774|dbj|BAJ86198.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 541

 Score =  153 bits (387), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 63/411 (15%), Positives = 145/411 (35%), Gaps = 60/411 (14%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           +    +          +  +    +L         ++     G+ I++ +  Y+  K K+
Sbjct: 59  DREGQVTPRSTDFNAWYTDVIAAAELADYGPVRGTMVI-RPYGYAIWEAIQDYLNVKFKE 117

Query: 290 -DYEEINTPQVLDQHL-WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
             +  +  PQ +      +++ H + +   +  V        + +   ++P +      +
Sbjct: 118 TGHSNMYFPQFIPYSFIEKEASHVEGFSPELAVVTIGGGKELEEK-LVVRPTSETIVNHM 176

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLK 406
           F   ++SYR+LP+ + ++ +V R E        +R   F   + H    T E+   E ++
Sbjct: 177 FTKWIQSYRDLPLMINQWANVTRWEMR--TKPFIRTLEFLWQEGHTAHATLEEAEKEAMQ 234

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           + ++      +     ++    +R E   G+D  +                         
Sbjct: 235 MIDVYTKFSYEQAAIPVIPGRKSRVETFAGADRTY------------------------- 269

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
                        E ++ D   +  Q GT   +  N    F   +++ + +  H   + +
Sbjct: 270 -----------TIEAMMGD--KKALQAGTSHNLGQNFSRAFETQFMDENGQLEH---VWQ 313

Query: 526 AVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTITSS------AVEYAQEIANLL 575
             +    RF+G +I     +    LP  ++PIQ ++  I          +E    + N L
Sbjct: 314 TSWAISTRFVGGIIMTHGDDAGLMLPPRIAPIQVVIVPIWKKGDEKRVVMEAVASVQNTL 373

Query: 576 KSHHLSIETDFRN-ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
           K   + ++ D     T  +K   + +K +PI I  G ++   RS+ + R  
Sbjct: 374 KEAGIRVKVDNSELRTPGWKFNFYEMKGVPIRIELGPRDVKNRSVVLSRRD 424


>gi|238918575|ref|YP_002932089.1| prolyl-tRNA synthetase [Edwardsiella ictaluri 93-146]
 gi|259511594|sp|C5B780|SYP_EDWI9 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|238868143|gb|ACR67854.1| prolyl-tRNA synthetase, putative [Edwardsiella ictaluri 93-146]
          Length = 572

 Score =  153 bits (387), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 50/249 (20%), Positives = 98/249 (39%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++   + + +R 
Sbjct: 3   TSQYLLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGLRVLNKVENIVRE 59

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E++ P V    LWQ+SG W+ Y   +       D     R F L P +    
Sbjct: 60  EMNYAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGD-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + + SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLVRNEISSYKQLPLNFYQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHTTQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            + ++     I+   G +   V+  T       S      A++    ++ +  +     I
Sbjct: 174 YEAMYAAYSRIFSRMGLDFRAVQADTGSIGGNASHEFQVLAQSGEDDIVFSTASDYAANI 233

Query: 464 NTGVLLGEG 472
                L   
Sbjct: 234 ELAEALAPA 242



 Score = 88.7 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 55/168 (32%), Gaps = 13/168 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           I R  + G I Q+        NA             ++    +G  + R +   IE    
Sbjct: 405 IKRGIEVGHIFQLGTKYTEALNATVQGEDG---RNQLMTMGCYGIGVTRVVAAAIEQNHD 461

Query: 545 N----LPLWLSPIQAIVTTITSSAVEYAQEIANLL----KSHHLSIETDFRNETINYKIR 596
                 P  ++P Q  +  +        +E+A  L    ++  + +  D R E       
Sbjct: 462 ERGIIWPDAIAPFQVAILPMNMHKSFRVKEVAERLYDGLRAKGIEVLLDDRKERPGVMFA 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  +  IP  I+ GD+      I  +   S     +S+ +    L  +
Sbjct: 522 DMELIGIPHTIVIGDRNLDNNEIEYKYRRSGDKLMISVDEIEAFLQAQ 569


>gi|297850234|ref|XP_002892998.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297338840|gb|EFH69257.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 363

 Score =  153 bits (387), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 47/188 (25%), Positives = 86/188 (45%), Gaps = 18/188 (9%)

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
           Q  +   +  G G FYGP  +  + DA+ ++ QCGT+Q+DF  P RF   Y +       
Sbjct: 192 QKVMFWQLNKGNGKFYGPSIDVRISDAVKKNIQCGTLQLDFQQPDRFKLEYSS------- 244

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH 579
                     + +    I++E+++G  P WLSP QAIV +++     YA+++ + +    
Sbjct: 245 ---------SAEDEMFFILLEHYEGKWPFWLSPHQAIVCSLSEKHRSYAEKVRDQIHEAR 295

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG--STTTQKVSLLDA 637
             ++ D     I  K+RE    +   I+  GD EA+   + +RR     +    +S+   
Sbjct: 296 YYVDVDISGRKIEEKVREAQAAQYNYILAVGDFEAATGQVSVRRREENGSDFVVMSIEAL 355

Query: 638 IPILTKES 645
           + +   + 
Sbjct: 356 LDVFKAQE 363



 Score = 97.2 bits (240), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 34/122 (27%), Positives = 64/122 (52%), Gaps = 7/122 (5%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEIN 295
           + E++ + DH  L ++ +LF   E   G  F+     +++  L+++++++     Y E+ 
Sbjct: 72  YTEDARQCDHILLGQQQELFFCHELSPGSWFFLPHATRVYNKLMAFIKKEYWKRGYTEVM 131

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           +P + +  LW+ SGH  + + NMF          D + F LK +NCPGH  +F   ++S 
Sbjct: 132 SPNMYNMKLWETSGHAANEKENMFTFDV------DKQEFGLKHVNCPGHCLLFQQRVRSC 185

Query: 356 RE 357
           RE
Sbjct: 186 RE 187


>gi|258543749|ref|ZP_05703983.1| proline--tRNA ligase [Cardiobacterium hominis ATCC 15826]
 gi|258520985|gb|EEV89844.1| proline--tRNA ligase [Cardiobacterium hominis ATCC 15826]
          Length = 567

 Score =  153 bits (387), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 46/245 (18%), Positives = 91/245 (37%), Gaps = 10/245 (4%)

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLF--HIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
             L+++    ++    D   ++ ++ L    I ++  GV  W   G ++ + +   +R +
Sbjct: 1   MRLSRFWLTTQKETPADAEVISHQLMLRAGMIRQNALGVYSWLPLGLRVLRKVEQIIREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P V    LWQ+SG W  Y   +          +  R + L P +     
Sbjct: 61  MNRAGSLELLMPGVQPGELWQESGRWQDYGPELLRFLD-----RHEREYCLGPTHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    L SY++LP+ + +  + +R+E      G+MR R F   DA+ F   E       
Sbjct: 116 DLMRRDLSSYKQLPLNVYQIQTKFRDEIRPRF-GVMRGREFLMKDAYSFHLDEASLQATY 174

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
           + +++    I+   G +   V          GS      A      ++ +   S    + 
Sbjct: 175 QDMYDAYCRIFDRLGLDYRPVLADNGSIGGTGSHEFHVLAATGEDAIVFSSSGSYAANLE 234

Query: 465 TGVLL 469
               L
Sbjct: 235 KAEAL 239



 Score = 77.1 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 26/166 (15%), Positives = 55/166 (33%), Gaps = 11/166 (6%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           AI R  + G I Q+                     P+M    +   + R +   IE    
Sbjct: 401 AIRRGIEVGHIFQLGKKYSEAMGLKIQLEDGGSAIPLMGCYGI--GVTRVVAAAIEQNHD 458

Query: 545 N----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                 P  ++P    +  +    +   +  A+ +   L +  + +  D R +   +   
Sbjct: 459 ERGIIWPQAIAPFTVAILPLNAAKSPEVMAAAEALYQKLLAAGVDVVLDDRGKRPGFMFA 518

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +  +  IP  ++  DK  +   +  +   S + + V+L      LT
Sbjct: 519 DMDLIGIPARVVISDKTLANGEVEYKERRSDSAEMVALDAIYDRLT 564


>gi|67922129|ref|ZP_00515644.1| Prolyl-tRNA synthetase, bacterial [Crocosphaera watsonii WH 8501]
 gi|67856029|gb|EAM51273.1| Prolyl-tRNA synthetase, bacterial [Crocosphaera watsonii WH 8501]
          Length = 602

 Score =  153 bits (387), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 63/303 (20%), Positives = 110/303 (36%), Gaps = 11/303 (3%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q           E+E   H+ L R   +  I   GSG+  +    W++ Q +   +R +
Sbjct: 4   SQMLFVTLREDPAEAEIPSHKLLLRAGYIRRI---GSGIYAYLPLMWRVLQKVSQIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E   PQ+    LW++SG W++Y      +    D  +  R   L P +     
Sbjct: 61  MNAAGAQECLLPQLQPSELWKESGRWETYTKAEGIMFSLID--RQERELGLGPTHEEVIT 118

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            V    ++SYR+LPV L +  + +R+E      GLMR R F   DA+ F   E    +  
Sbjct: 119 TVAKDMIRSYRQLPVNLYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSFNEDEASLQKSY 177

Query: 406 KIH-NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
           +       +I    G     V+  +       S      AE     VL T        I 
Sbjct: 178 EAMDRAYRNIISRCGLAYRAVEADSGAIGGSASQEFMILAEAGEDEVLYTEDGKYAANIE 237

Query: 465 TGVLLG---EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
             V L    E + +    +    D+   +  C ++Q       +   +     + K   +
Sbjct: 238 KAVSLPKDLEISPFTAYEKKETPDSNTIEKVCQSLQCSPTNIVKNVLYEAVYDNGKTVLI 297

Query: 522 MIH 524
           ++ 
Sbjct: 298 LVS 300



 Score = 85.6 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 26/165 (15%), Positives = 63/165 (38%), Gaps = 9/165 (5%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           A  R  + G I Q+         A + + +  +  P+++     G        + +++  
Sbjct: 432 ASARGIEVGHIFQLGTKYSQAMGATFTDENGAEK-PIVMGCYGVGVSRLAQASVEQSYDK 490

Query: 545 NLPLWL---SPIQAIVTT---ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           +  +W    +P  AI+        + +E AQ + N L    +    D R+E    K ++ 
Sbjct: 491 DGIIWPVAITPYHAIIIVPNIKDKNQMEVAQNLYNQLNKIGVETLLDDRDERAGVKFKDA 550

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +  IP  ++ G +      + +    +  +Q++ + + +  L  
Sbjct: 551 DLIGIPYRVVTG-RSLKAGKVEVVTRQTKESQEIEVTNLVETLKN 594


>gi|254491952|ref|ZP_05105130.1| prolyl-tRNA synthetase [Methylophaga thiooxidans DMS010]
 gi|224462767|gb|EEF79038.1| prolyl-tRNA synthetase [Methylophaga thiooxydans DMS010]
          Length = 569

 Score =  153 bits (387), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 44/245 (17%), Positives = 90/245 (36%), Gaps = 11/245 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +   ++       ++E   H+ + R   +  +A   SG+  W   G K+ +   + +R 
Sbjct: 3   ASNLLISTLKETPADAEIVSHQLMLRAGLIRRLA---SGLYTWLPMGLKVLRKTEAIIRD 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +E+  P V    LWQ+S  W+ Y   +  +     T +  R F   P +    
Sbjct: 60  EMDKAGAQEVLMPSVQPSELWQESQRWEKYGPELLRI-----TDRHQREFCYGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    ++SY++LP+   +  + +R+E      GLMR R F   DA+ F        + 
Sbjct: 115 TDLVRQEIRSYKQLPINFYQIQTKFRDEIRPRF-GLMRAREFLMKDAYSFHLDHASLQQT 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +      I+   G +   V+  T       S      A +    +  + ++     +
Sbjct: 174 YDDMFAAYSRIFSRIGLDFRPVQADTGSIGGNASHEFHVLASSGEDAIAFSDQSDYAANV 233

Query: 464 NTGVL 468
                
Sbjct: 234 ELAEA 238



 Score = 86.4 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 62/165 (37%), Gaps = 13/165 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN- 545
           R  + G I Q+  N  S+ NA  +N   +     +I    +G  + R +   IE    + 
Sbjct: 405 RGIEVGHIFQLGENYSSKLNAVVLNETGKSQ---VITMGCYGIGVSRVVAAAIEQNNDDR 461

Query: 546 ---LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
               P  ++P Q ++  +    +    + A+EI   L++  + +  D R         + 
Sbjct: 462 GIIWPEAIAPYQVVLVPVNAHKSVRVKQKAEEIYQQLQAAGIDVLLDDRGLRPGVAFADM 521

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +  IP  +I G++      I  +   +    +  +   I  + +
Sbjct: 522 ELIGIPHRLILGERGLDNGMIEYKSRRTGEGDEFPIESVIETIKQ 566


>gi|39938732|ref|NP_950498.1| prolyl-tRNA synthetase [Onion yellows phytoplasma OY-M]
 gi|81830053|sp|Q6YQX7|SYP_ONYPE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|39721841|dbj|BAD04331.1| prolyl-tRNA synthetase [Onion yellows phytoplasma OY-M]
          Length = 474

 Score =  153 bits (387), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 64/413 (15%), Positives = 154/413 (37%), Gaps = 58/413 (14%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           + +  +  + +L   + +  G I +   G+ +++ +  ++   ++   ++ +  P V  +
Sbjct: 19  KWYTDVCLKAELIAYS-EAKGFIIYLPYGYALWENIQKHLNCTLQKTGHQNVYFPLVFPE 77

Query: 303 HLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
            L+ ++  H   +      +              ++P +       ++  + SYR+LP  
Sbjct: 78  KLFHKEKNHIQGFSPEAAMITTTGKKNL-SEKLVIRPTSEILFSQYYSKTITSYRDLPKL 136

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
             ++ +V R E   +    +R + F   + H     EQ   E ++    I+ IY+  G  
Sbjct: 137 YNQWCNVVRWEK--TTKPFLRGKEFLWQEGHTVHATEQ---EAMQQTLSILDIYQKLGK- 190

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
                                          + +         T      GA      E 
Sbjct: 191 -------------------------------NLLALPFVCGKKTETEKFAGALITYSIEA 219

Query: 482 ILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI- 539
           ++ D  G+  Q GT      N    F   + +   +K +   +H+  +G   R IG +I 
Sbjct: 220 LMHD--GQALQAGTSHYLGTNFAKSFQIQFQDCDHQKKY---VHQTSWGVSTRLIGALIM 274

Query: 540 ---ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
              ++    LP ++SP+Q ++  +     +  + ++ + ++L+ +   +  D +++T  +
Sbjct: 275 VHSDDEGLVLPPYVSPMQIVIIPLQPQDDAVKQTSENLFSILQKN-YRVHLDLQDKTAGW 333

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA---IPILTK 643
           K  ++ +K +P+ I  G +      + I +  +   Q +   D    IP L +
Sbjct: 334 KFSQYELKGVPLRIEIGKRGLENDEVTIFQRYNFAKQNIKTKDLPSQIPQLFE 386


>gi|261855252|ref|YP_003262535.1| prolyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
 gi|261835721|gb|ACX95488.1| prolyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
          Length = 568

 Score =  153 bits (387), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 52/240 (21%), Positives = 94/240 (39%), Gaps = 11/240 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  L        E+E   H+ + R   +  +A   SG+  W   G ++ + + + +R +
Sbjct: 4   SQFPLNTLKETPTEAEIISHQLMLRAGMIRRLA---SGLYTWSPLGLRVLRKVEAVVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++     E+  P +    LWQ+SG W  Y   +  VK   D     R F + P +     
Sbjct: 61  MEGIGALELLMPAIQPAELWQESGRWQKYGPELLRVKDRHD-----REFCVGPTHEEVIS 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
                 LKSYR+LP+   +  + +R+E      G+MR R F   DA+ F    E +    
Sbjct: 116 DYARRELKSYRQLPICYYQVQTKFRDEIRPRF-GVMRAREFIMKDAYSFHADVESLRVTY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
             +++    I+   G +   V+  T      GS      A++    +   +       + 
Sbjct: 175 QAMYDAYTRIFTRLGLKFRAVEADTGSIGGKGSHEFHVLADSGEDAIAYAVNGDYAANVE 234



 Score = 74.8 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 62/174 (35%), Gaps = 11/174 (6%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           P  +   K AI R  + G + Q+      + +  +++ H +    +M    +   + R +
Sbjct: 392 PAPDGQDKLAIARGIEVGHVFQLGTTYSEKMHCEFLDEHGKPATAIMGCYGI--GVSRIV 449

Query: 536 GIMIE-NFKGNLPLW---LSPIQAIVTTIT----SSAVEYAQEIANLLKSHHLSIETDFR 587
              IE N   N  +W   L+P +  +  I      +    A+ +   L +   ++  D R
Sbjct: 450 AAAIEQNHDDNGIVWPVPLAPFEVAIVPINGHRAPAVQAEAERLEAELTAQGFNVLLDDR 509

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
                    +  +  IP+ I+  ++  +      R    +  + +     +  +
Sbjct: 510 GLRPGVAFADMELIGIPLRIVVSERGLAAGEYETRLRWESENKSIIADQLLAWI 563


>gi|260557205|ref|ZP_05829421.1| prolyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606]
 gi|260409311|gb|EEX02613.1| prolyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606]
          Length = 571

 Score =  153 bits (387), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 73/427 (17%), Positives = 148/427 (34%), Gaps = 47/427 (11%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++           ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   ASRFLFATLRETPNDAEVISHQLMLRAGMIRKLA---SGLYTWLPMGTRVLKKVDAIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P      LW++SG ++ Y   +   K   D       F L P +    
Sbjct: 60  EMNRSGAMEVFMPVTQPASLWEESGRYEQYGPELLRFKDRHDNP-----FVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + LKSY++LPV   +  + +R+E      G+MR R F   DA+ F   ++   E 
Sbjct: 115 TDLARNELKSYKQLPVNFYQIQTKFRDEIRPRF-GVMRSREFIMKDAYSFHATQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +++    I+   G +   V+  T       S      A +    +  + ++     +
Sbjct: 174 YDVMYDTYSRIFTRLGLDFRPVQADTGSIGGSASHEFHVLAASGEDDIAFSTESDYAANV 233

Query: 464 N--TGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF--NAFYVNSHSEKCH 519
                VL+GE A   P  E+ L +   +       Q     P +            EK +
Sbjct: 234 EMAEAVLVGERA--APTQEFKLVETPNQKTIADVCQFLNADPKQSVKALLVQGVADEKGN 291

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP------IQAIVTTITSSAVEYAQEIAN 573
             ++   + G  E     + E      PL  +P       Q     +T+           
Sbjct: 292 VPVVALFLRGDHE-----LNEIKAEKHPLVAAPLAFATEEQLQAFGLTAGFTGP-----Q 341

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR-RFGSTTTQKV 632
            L    +++  D     ++               + G  EA + ++G+     +  T+  
Sbjct: 342 GLVEKGITVIVDRAASVLSD-------------FVAGANEADKHAVGVNWERDAQITEVF 388

Query: 633 SLLDAIP 639
            L + + 
Sbjct: 389 DLRNVVE 395



 Score = 86.8 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 59/167 (35%), Gaps = 13/167 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           I R  + G I Q+            +    +   P  +    +G  + R +   IE N+ 
Sbjct: 408 IKRGIEVGHIFQLGTKYSEALGCKVLGEDGK---PFTVTMGCYGIGVTRVVAAAIEQNYD 464

Query: 544 GNLPLWL---SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
               +W    +P +  +  +    +   +E A+ +   L++    +  D RNE    K  
Sbjct: 465 DKGIIWPQAIAPFEIAIVPMNAHKSPRTLEAAEALYAELQAQGFDLLLDDRNERPGVKFS 524

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  +  IP  I+ G+K     +   +         ++  + +  L +
Sbjct: 525 DLELMGIPHRIVIGEKGLDAGTFEYKGRRDAEASNLTKEELLAKLAR 571


>gi|50083997|ref|YP_045507.1| prolyl-tRNA synthetase [Acinetobacter sp. ADP1]
 gi|81827514|sp|Q6FE23|SYP_ACIAD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|49529973|emb|CAG67685.1| prolyl-tRNA synthetase [Acinetobacter sp. ADP1]
          Length = 570

 Score =  153 bits (387), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 64/334 (19%), Positives = 123/334 (36%), Gaps = 24/334 (7%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++           ++E   H+ + R   +  +A   SG+  W   G ++   + + +R 
Sbjct: 3   ASRFLFATLRETPNDAEVISHQLMLRAGMIRKLA---SGLYTWLPMGVRVLNKVEAIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P      LW++SG +  Y   +   K   D       F L P +    
Sbjct: 60  EMNRSGALEVFMPVTQPASLWEESGRYVQYGPELLRFKDRHDNP-----FVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + LKSY++LP+   +  + +R+E      G+MR R F   DA+ F   +    E 
Sbjct: 115 TDLARNELKSYKQLPINFYQIQTKFRDEIRPRF-GVMRSREFIMKDAYSFHVDQASLQET 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +++    I+   G +   V+  T      GS      A++    ++ + ++     +
Sbjct: 174 YDNMYDTYCRIFTRLGLDFRPVQADTGSIGGSGSHEFHVLADSGEDDIVFSTESDYAANV 233

Query: 464 N--TGVLLGEGAFYGPKFEYILKDAIGRD---WQCGTIQVDFNLPSRFNAFYVNSHSEKC 518
                VL+GE A   P     + D   +      C  +  D     +      N+  +  
Sbjct: 234 EKAEAVLVGERA--APAQALSIVDTPNQKTIADVCTFLNADPKQSVKALLVQGNADEKGN 291

Query: 519 HPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
            PV I   + G  E     + E    + PL  +P
Sbjct: 292 VPV-IALFLRGDHE-----LNEIKAEHHPLIAAP 319



 Score = 90.2 bits (222), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 29/176 (16%), Positives = 64/176 (36%), Gaps = 13/176 (7%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
           P  +      I R  + G I Q+        N   +    +   P+++    +G  + R 
Sbjct: 398 PSPDGQGVLQIKRGIEVGHIFQLGQKYSEALNCTVLGDDGK---PLVVTMGCYGIGVTRV 454

Query: 535 IGIMIE-NFKGNLPLWL---SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDF 586
           +   IE N+     +W    +P +  +  +    +   +E A+ +   L++    +  D 
Sbjct: 455 VASAIEQNYDDKGIIWPSAIAPFEIAIVPMNAHKSPKTLEAAEALYAELQAQGYDVLLDD 514

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           RNE    K  +  +  IP  I+ G+K     +   +      +  ++  + +  L 
Sbjct: 515 RNERPGVKFSDLELTGIPHRIVIGEKGLDAGTFEYKGRTDAESVNLTKDELLAKLK 570


>gi|256384016|gb|ACU78586.1| proline--tRNA ligase [Mycoplasma mycoides subsp. capri str. GM12]
 gi|256384848|gb|ACU79417.1| proline--tRNA ligase [Mycoplasma mycoides subsp. capri str. GM12]
 gi|296455440|gb|ADH21675.1| proline--tRNA ligase [synthetic Mycoplasma mycoides JCVI-syn1.0]
          Length = 474

 Score =  153 bits (387), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 67/374 (17%), Positives = 139/374 (37%), Gaps = 50/374 (13%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAV 321
           G + +   G++I++ +  Y+  + K  + + +  P ++ + L+ ++  H + +   +  V
Sbjct: 36  GTMIFRPYGYRIWELIQKYLDEEFKKINVDNVYFPLLIPESLFNKEKDHIEGFSPEIATV 95

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
               +   +   F ++P +    +  F++ + SYR+LP+   ++ +V R E   +    +
Sbjct: 96  TKVGEKQLEENLF-IRPTSEVVMMDYFSNEINSYRDLPLIYNQWCNVMRWEK--TTRPFL 152

Query: 382 RVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           R   F   + H   +   +  + CLKI N+     KD     ++    T  EK  G    
Sbjct: 153 RTSEFLWQEGHTVHSSYNEAEDFCLKILNIYEKFAKDILLLPVICGKKTEKEKFAG---- 208

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDF 500
                                           A      E ++ D  G+  QCGT     
Sbjct: 209 --------------------------------AKDTYTIESLMFD--GQALQCGTSHFFA 234

Query: 501 NLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI--QAIVT 558
           +  ++   + +   +++      +   +G   R IG +I     +  L L        + 
Sbjct: 235 DNFTK--VYDIKFQNKENKLEHAYSTSWGVSTRLIGALIMTHSDDNGLVLPSKISPIQIQ 292

Query: 559 TITSSAVEYAQEIANLLKSH--HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASE 616
            I     E   ++  ++K       I+ D  +++  +KI E  IK IPI I  G ++   
Sbjct: 293 IIQIKNTEQIDQVVEIIKDKLSDYRIDVDNSDKSFGFKISEAEIKGIPIRIEIGPRDLEN 352

Query: 617 RSIGIRRFGSTTTQ 630
             I I R      +
Sbjct: 353 NQITISRRDQQENK 366


>gi|269137906|ref|YP_003294606.1| prolyl-tRNA synthetase [Edwardsiella tarda EIB202]
 gi|267983566|gb|ACY83395.1| prolyl-tRNA synthetase [Edwardsiella tarda EIB202]
 gi|304557958|gb|ADM40622.1| Prolyl-tRNA synthetase [Edwardsiella tarda FL6-60]
          Length = 572

 Score =  153 bits (387), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 51/250 (20%), Positives = 97/250 (38%), Gaps = 11/250 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++   + + +R 
Sbjct: 3   TSQYLLSTLKETPADAEVVSHQLMLRAGMIRKLA---SGLYTWLPTGLRVLNKVENIVRE 59

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E++ P V    LWQ+SG W+ Y   +       D     R F L P +    
Sbjct: 60  EMNYAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGD-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + + SY++LP+   +  + +R+E      G+MR R F   DA+ F T +    E 
Sbjct: 115 TDLVRNEISSYKQLPLNFYQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHTTQASLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   G +   V+  T       S      A++    ++ +  +     I
Sbjct: 174 YDAMYAAYGRIFSRMGLDFRAVQADTGSIGGNASHEFQVLAQSGEDDIVFSTASDYAANI 233

Query: 464 NTGVLLGEGA 473
                L   A
Sbjct: 234 ELAEALAPTA 243



 Score = 89.5 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 56/168 (33%), Gaps = 13/168 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           I R  + G I Q+        NA             ++    +G  + R +   IE    
Sbjct: 405 IKRGIEVGHIFQLGTKYTEALNATVQGEDG---RNQLMTMGCYGIGVTRVVAAAIEQNHD 461

Query: 545 N----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                 P  ++P Q  +  +         E A+ + + L++  + +  D R E       
Sbjct: 462 ERGIIWPDAIAPFQVAILPMNMHKSFRVKEVAERLYDELRAKGIEVLLDDRKERPGVMFA 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  +  IP  ++ GD+      I  +   S     +S+ +    L  +
Sbjct: 522 DMELIGIPHTVVIGDRNLDNNEIEYKYRRSGEKLMISVDEIAAFLQAQ 569


>gi|184159387|ref|YP_001847726.1| prolyl-tRNA synthetase [Acinetobacter baumannii ACICU]
 gi|239501767|ref|ZP_04661077.1| prolyl-tRNA synthetase [Acinetobacter baumannii AB900]
 gi|332876227|ref|ZP_08444002.1| proline--tRNA ligase [Acinetobacter baumannii 6014059]
 gi|226695842|sp|B2HY33|SYP_ACIBC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226731481|sp|A3M8I1|SYP_ACIBT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|183210981|gb|ACC58379.1| Prolyl-tRNA synthetase [Acinetobacter baumannii ACICU]
 gi|193078264|gb|ABO13225.2| prolyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978]
 gi|322509299|gb|ADX04753.1| proS [Acinetobacter baumannii 1656-2]
 gi|323519326|gb|ADX93707.1| prolyl-tRNA synthetase [Acinetobacter baumannii TCDC-AB0715]
 gi|332735499|gb|EGJ66551.1| proline--tRNA ligase [Acinetobacter baumannii 6014059]
          Length = 571

 Score =  153 bits (387), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 73/427 (17%), Positives = 148/427 (34%), Gaps = 47/427 (11%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++           ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   ASRFLFATLRETPNDAEVISHQLMLRAGMIRKLA---SGLYTWLPMGTRVLKKVDAIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P      LW++SG ++ Y   +   K   D       F L P +    
Sbjct: 60  EMNRSGAMEVFMPVTQPASLWEESGRYEQYGPELLRFKDRHDNP-----FVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + LKSY++LPV   +  + +R+E      G+MR R F   DA+ F   ++   E 
Sbjct: 115 TDLARNELKSYKQLPVNFYQIQTKFRDEIRPRF-GVMRSREFIMKDAYSFHATQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +++    I+   G +   V+  T       S      A +    +  + ++     +
Sbjct: 174 YDVMYDTYSRIFTRLGLDFRPVQADTGSIGGSASHEFHVLAASGEDDIAFSTESDYAANV 233

Query: 464 N--TGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF--NAFYVNSHSEKCH 519
                VL+GE A   P  E+ L +   +       Q     P +            EK +
Sbjct: 234 EMAEAVLVGERA--APTQEFKLVETPNQKTIADVCQFLNADPKQSVKALLVQGVADEKGN 291

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP------IQAIVTTITSSAVEYAQEIAN 573
             ++   + G  E     + E      PL  +P       Q     +T+           
Sbjct: 292 VPVVALFLRGDHE-----LNEIKAEKHPLVAAPLAFATEEQLQAFGLTAGFTGP-----Q 341

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR-RFGSTTTQKV 632
            L    +++  D     ++               + G  EA + ++G+     +  T+  
Sbjct: 342 GLVEKGITVIVDRAASVLSD-------------FVAGANEADKHAVGVNWERDAQITEVF 388

Query: 633 SLLDAIP 639
            L + + 
Sbjct: 389 DLRNVVE 395



 Score = 89.5 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 59/167 (35%), Gaps = 13/167 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           I R  + G I Q+            +    +   P  +    +G  + R +   IE N+ 
Sbjct: 408 IKRGIEVGHIFQLGTKYSEALGCKVLGEDGK---PFTVTMGCYGIGVTRVVAAAIEQNYD 464

Query: 544 GNLPLWL---SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
               +W    +P +  +  +    +   +E A+ +   L++    +  D RNE    K  
Sbjct: 465 DKGIIWPQAIAPFEIAIVPMNAHKSPRTLEAAEALYAELQAQGFDVLLDDRNERPGVKFS 524

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  +  IP  I+ G+K     +   +         ++  + +  L +
Sbjct: 525 DLELMGIPHRIVIGEKGLDAGTFEYKGRRDAEASNLTKEELLAKLAR 571


>gi|328780811|ref|XP_003249866.1| PREDICTED: bifunctional aminoacyl-tRNA synthetase [Apis mellifera]
          Length = 1501

 Score =  153 bits (387), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 96/523 (18%), Positives = 174/523 (33%), Gaps = 70/523 (13%)

Query: 134  SPFLKQYLSHEK-ARELFES-KKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRST 191
             P     +  E  A ++ ES +K+  KV  L+ I   +++         DL       + 
Sbjct: 891  IPITNNVIHKEDSADKILESIQKQGDKVRQLKEIKTDKSIIDQEVKILIDLKNNYKTLTG 950

Query: 192  GQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL---------YFLEESE 242
             + K                S       I     N  +++                EE+ 
Sbjct: 951  QEWKTINYDTSPKKKKKEDTSKCEKRKNISNKEINKNEDIKDTDVGKTRLGLEAKKEENF 1010

Query: 243  KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
               + ++  +  +     D SG        + I++ +  Y+ ++I     +E   P  + 
Sbjct: 1011 FEWYSQIITKSGMIEY-YDVSGCYILRPWSFAIWKAIKEYIDKEITQMGVQECYFPIFVT 1069

Query: 302  QHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            + + + +  H   +   +  V    ++       A++P +       +   LKS  ELP+
Sbjct: 1070 RTVLEKEKAHITDFAPEVAWVTKCGESNL-SEPIAIRPTSETVMYPAYAKWLKSDTELPL 1128

Query: 361  RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFG 419
            +L ++ +V R E        +R R F   + H  F TK +   E L I N+   +Y+D  
Sbjct: 1129 KLNQWNNVVRWEFKDP-KPFLRTREFLWQEGHTAFATKAEADEEVLMILNMYARVYEDLL 1187

Query: 420  FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
               ++    T  EK  G D                                    Y    
Sbjct: 1188 AVPVIKGRKTEKEKFAGGD------------------------------------YTTTV 1211

Query: 480  EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
            E  +  + GR  Q  T        S+     V    E      +++  +G   R IG+MI
Sbjct: 1212 EAFISTS-GRAIQGATSHHLGQNFSKMFNIQVEGAVESDEKTFVYQNSWGLTTRTIGVMI 1270

Query: 540  ENFKGNLPLWLSP----IQAIVTT------ITSSAVEY----AQEIANLL-KSHHLSIET 584
                 +  L L P    IQAI+         T    E       ++ + L K   L ++ 
Sbjct: 1271 MIHGDDKGLVLPPNVACIQAIIVPCGITVNTTPQQRELLFSECNKLLDELSKDKSLRVKA 1330

Query: 585  DFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS 626
            D+RN  T  +K     +K +P+ I  G K+  +  +   R  +
Sbjct: 1331 DYRNNRTPGWKFNHWELKGVPVRIELGPKDLEKNQVTFVRRDN 1373


>gi|77164414|ref|YP_342939.1| prolyl-tRNA synthetase [Nitrosococcus oceani ATCC 19707]
 gi|254434306|ref|ZP_05047814.1| prolyl-tRNA synthetase [Nitrosococcus oceani AFC27]
 gi|114152222|sp|Q3JCN7|SYP_NITOC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|76882728|gb|ABA57409.1| Prolyl-tRNA synthetase [Nitrosococcus oceani ATCC 19707]
 gi|207090639|gb|EDZ67910.1| prolyl-tRNA synthetase [Nitrosococcus oceani AFC27]
          Length = 574

 Score =  153 bits (387), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 44/241 (18%), Positives = 92/241 (38%), Gaps = 11/241 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  LT       ++E   H+ + R   +  +A    G+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLTTTRETPADAEIISHQLMLRGSFIRRLAA---GLYTWLPLGLRVLRKVENIIRE 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +E+  P V    LW+++G W+ Y   +        T +  R F   P +    
Sbjct: 60  EMDKAGAQEVLMPAVQPAELWRETGRWEQYGPELLRF-----TDRHQRFFCFGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    ++SY++LP    +    +R+E      G+MR R F   DA+ F   +    + 
Sbjct: 115 TDLIRREIRSYKQLPANFYQIQLKFRDEIRPRF-GVMRSREFLMKDAYSFHPDQTSLAQT 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             +++     I+   G     V+  T       S      A +    +  + K++    +
Sbjct: 174 YNQMYETYSRIFDRIGLTFRAVQADTGAIGGKTSHEFHVLAASGEDAIAFSDKSTYAANV 233

Query: 464 N 464
            
Sbjct: 234 E 234



 Score = 89.1 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 60/174 (34%), Gaps = 13/174 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN- 545
           R  + G I Q+        NA  ++        + +    +G  + R +   IE      
Sbjct: 404 RGIEVGHIFQLGEKYSQAMNATVLDETG---RAISLAMGCYGIGVSRVVAAAIEQNHDEH 460

Query: 546 ---LPLWLSPIQAIVTTITSSAVEYAQEIANLL----KSHHLSIETDFRNETINYKIREH 598
               P  ++P Q  +  I +      +E+++ L    ++    +  D R         + 
Sbjct: 461 GIIWPASIAPFQLALVPINAHKSARVKEMSDRLYTELQAAGFEVLLDDRQLRPGVIFADM 520

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
            +  IP  ++  ++     ++  +R     T  + L + I  L  E   P  ++
Sbjct: 521 DLIGIPYRLVISERGLENNTVEYKRRQDGKTCAIQLDNFISGLKAELKAPISRR 574


>gi|326512486|dbj|BAJ99598.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 554

 Score =  153 bits (386), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 69/406 (16%), Positives = 144/406 (35%), Gaps = 63/406 (15%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQ-QSGHWDSYRAN 317
            D SG        + I++++  ++  + K         P ++ +   + +  H + +   
Sbjct: 82  YDISGCYVLRPWAYSIWESIQGFLDGEFKKSGVSNAYFPLLVSKRQLELEKAHVEGFAPE 141

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           +  V  + D+       A++P +       +   ++S+R++P+RL ++ +V R E    +
Sbjct: 142 VAWVTRSGDSEL-AEPVAIRPTSETIMYPCYAKWIRSHRDMPLRLNQWCNVIRWEFKHPV 200

Query: 378 HGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
              +R R F   + H  F T+ +   E L+I  +    Y++     +     +  EK  G
Sbjct: 201 -PFLRTREFLWQEGHSAFATRPEAEAEVLEILEIYKRAYEELLAIPVTKGKKSEGEKFAG 259

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
                                                FY    E  +         C + 
Sbjct: 260 G------------------------------------FYTTTCEAFIPATGRGIQACTSH 283

Query: 497 QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL----SP 552
            +  N    F   +      K    +  +  +G   R IG++I     N  L L    +P
Sbjct: 284 CLGQNFSKMFGIEFEGVDGTKQ---LAWQNSWGFTTRSIGVLIMVHGDNKGLVLPPRVAP 340

Query: 553 IQAIVTTI-----TSSAVEYAQ----EIANLLKSHHLSIETDFR-NETINYKIREHSIKK 602
            Q +V  I     +      A+    +I ++L+  ++  + D R N T  +K      K 
Sbjct: 341 TQVVVVPIPYSKGSGDDGALAKRAQTDIVDVLRKANVRTQLDARANYTPGWKYNHWEAKG 400

Query: 603 IPIIIICGDKEASE-RSIGIRRFGSTTTQKVSLLDA---IPILTKE 644
           +P+ I  G K+    + + +R   +   + ++L      +P L +E
Sbjct: 401 VPVTIQFGPKDNDNAQCVAVR-RDTGAKETIALAALATRLPALLQE 445


>gi|327305829|ref|XP_003237606.1| prolyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
 gi|326460604|gb|EGD86057.1| prolyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
          Length = 607

 Score =  153 bits (386), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 88/419 (21%), Positives = 160/419 (38%), Gaps = 68/419 (16%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHL-WQQSGHWDSYRAN 317
            D SG        + I++ + S+   KIK  + +  + P  + + +  ++  H + + A 
Sbjct: 116 YDVSGCFVLKPHSFFIWEQIQSWFDAKIKQMNVKNCSFPLFVSEDVLKKEKDHIEGFAAE 175

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           +  V  A ++  + +  A++P +       +   ++S+R+LP++L ++ SV R E     
Sbjct: 176 VAWVTHAGNSPLEKK-IAIRPTSETVMYPYYAKWIRSHRDLPLKLNQWNSVVRWEFKNP- 233

Query: 378 HGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
              +R R F   + H    T+E+   E L+I      +Y++     ++    T  EK  G
Sbjct: 234 QPFLRTREFLWQEGHTAHLTREEAHTEVLQILQHYAHVYEELLAVPVIQGQKTDKEKFAG 293

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
                                                 Y    E  +  A GR  Q GT 
Sbjct: 294 G------------------------------------LYTTTVEGYIP-ATGRGIQGGTS 316

Query: 497 Q-VDFNLPSRFNAFYVNSH---SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
             +  N    F     +      EK  P+ I +  +G   R IG+M+     N  L L P
Sbjct: 317 HGLGQNFSKMFGITVEDPSARPDEKKPPLHIWQNSWGLSTRTIGVMVMIHGDNRGLVLPP 376

Query: 553 ----IQAIVTTITSSA----VEYA------QEIANLLKSHHLSIETDFRNE-TINYKIRE 597
               IQ ++  +   A     E A      + IA +L +  + +E D R+  T  +K  +
Sbjct: 377 RVADIQTVIVPVGLGAKTPDEERAAIMAEIEAIATVLSAAGVRVEVDKRDGYTPGWKFND 436

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRF---GSTTTQKVSLLD---AIPILTKESLPPDC 650
             +K IP+ +  G  E++   +   R    G      +S+ D   A+P L  E++  D 
Sbjct: 437 WELKGIPLRLEFGPGESAGSFVTTSRRDIAGKEGKSSISIKDLGTAVPALL-ETIQADL 494


>gi|329298700|ref|ZP_08256036.1| prolyl-tRNA synthetase [Plautia stali symbiont]
          Length = 572

 Score =  153 bits (386), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 53/249 (21%), Positives = 103/249 (41%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            TQ  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TTQYLLSTLKETPSDAEVISHQLMLRAGMIRKLA---SGLYTWLPTGIRVLRKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    EI+ P V    LW++SG W+ Y   +  +K      +  R F L P +    
Sbjct: 60  EMNNAGAIEISMPVVQPADLWEESGRWEQYGPELLRIKD-----RHERPFVLGPTHEEVV 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+ + +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLIRNELSSYKQLPLNVYQIQTKFRDEVRPRF-GVMRSREFIMKDAYSFHTSQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++      +   G +   V+  T      GS      A++    V+ + ++     I
Sbjct: 174 YDAMYRAYSQSFSRMGLDFRAVQADTGSIGGSGSHEFQVLAQSGEDDVIFSSESDYAANI 233

Query: 464 NTGVLLGEG 472
                L   
Sbjct: 234 EKAEALAPA 242



 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 61/167 (36%), Gaps = 13/167 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           I R  + G I Q+        +A       E     ++    +G  I R +   IE    
Sbjct: 405 IKRGIEVGHIFQLGTKYS---DAMKAAVQGEDGRNQIMTMGCYGIGITRVVAAAIEQNHD 461

Query: 545 N----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                 P  L+P +  +  +         E A+++ N L++  + +  D R E       
Sbjct: 462 ERGIIWPAALAPFEVAILPMNMHKSFRVKELAEQLYNELRAKGIDVILDDRKERPGVMFA 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  +  +P  I+ GD+    + I  +   ++  Q +   D +  L++
Sbjct: 522 DMELIGVPHTIVIGDRNLDNQEIEYKARAASEKQMIKQHDIVDFLSR 568


>gi|326335459|ref|ZP_08201646.1| proline--tRNA ligase [Capnocytophaga sp. oral taxon 338 str. F0234]
 gi|325692225|gb|EGD34177.1| proline--tRNA ligase [Capnocytophaga sp. oral taxon 338 str. F0234]
          Length = 492

 Score =  153 bits (386), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 68/411 (16%), Positives = 155/411 (37%), Gaps = 72/411 (17%)

Query: 270 RKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-----------QSGHWDSYRAN 317
             G+ I++ +   + +  K+  ++    P  + +  ++           +      YR  
Sbjct: 39  PYGYAIWERMKDILDKMFKETGHQNAYFPIFIPKSYFEAEEKNAEGFAKECAVVTHYRLK 98

Query: 318 MFAVK----CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP 373
               +      D   K      ++P +       + + ++SYR+LP+ + ++ +V R E 
Sbjct: 99  TDPSQKGKLIVDPEAKLEEELIVRPTSEAIIWNTYKNWIQSYRDLPILINQWANVVRWEM 158

Query: 374 SGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
                  +R   F   + H    T+E+   E  K++ +  +  + +    ++    T  E
Sbjct: 159 R--TRLFLRTAEFLWQEGHTAHATREEAIEEAQKMNEVYATFVEQYMGVPVIRGRKTEAE 216

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
           +  G+D  +                                      E +++D  G+  Q
Sbjct: 217 RFAGADDTY------------------------------------CIEALMQD--GKALQ 238

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPL 548
            GT        ++  AF V   +++     +  + +GS  R +G +I    ++    LP 
Sbjct: 239 AGTSHFLGQNFAK--AFEVKYANKEGVLDYVWASSWGSSTRLMGALIMSHSDDNGLVLPP 296

Query: 549 WLSPIQAIVTTI--TSSAVEYAQE----IANLLKSHHLSIETDFRN-ETINYKIREHSIK 601
            L+PIQ ++  I      ++  ++    +   LK H ++++ D  + +   +K  E+ +K
Sbjct: 297 LLAPIQVVIVPIYKGEEQLQSIRQRITPLMQALKKHEITVKFDDDDTQKPGFKFHEYELK 356

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
            +PI +  G ++    +  + R  + T + +S    +  +  ESL  D QK
Sbjct: 357 GVPIRLAVGQRDLENNTYEVARRDTLTKESISGERIVEHI--ESLLTDIQK 405


>gi|302554424|ref|ZP_07306766.1| prolyl-tRNA synthetase [Streptomyces viridochromogenes DSM 40736]
 gi|302472042|gb|EFL35135.1| prolyl-tRNA synthetase [Streptomyces viridochromogenes DSM 40736]
          Length = 471

 Score =  153 bits (386), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 71/414 (17%), Positives = 154/414 (37%), Gaps = 53/414 (12%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
             +   R ++ L  + +L         +I     G+ +++ + + M  +IK+   +    
Sbjct: 10  QADDFPRWYQDLITKAELADNGPVRGTMII-RPYGYGLWERMQAEMDARIKETGAQNAYF 68

Query: 297 PQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P ++ +    +++ H + +   +  V        +     ++P +     A F+  ++SY
Sbjct: 69  PLLIPESYLTREADHVEGFAPELAVVTHGGGKELE-EPAVVRPTSEMIINASFSKWVQSY 127

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           R+LP+ + ++ +V R E    L   +R   F   + H                       
Sbjct: 128 RDLPLLINQWANVVRWELRPRL--FLRTSEFLWQEGHTAHAT--------------YEEA 171

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           +DF         ++   +RV  D + +     +     T+K      INT  L G     
Sbjct: 172 RDF---------ASHIHRRVYEDFMLNVLAMDVVPGRKTVKERFAGAINTLTLEGMM--- 219

Query: 476 GPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
                       G+  Q  T   +  N    FN  Y++         ++ +  +GS  R 
Sbjct: 220 ----------GDGKALQMATSHELGQNFAKAFNTRYLSKDG---RQELVWQTSWGSTTRM 266

Query: 535 IGIMI----ENFKGNLPLWLSPIQAIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRN 588
           IG ++    ++    +P  L+ IQA+V  I    + +   +E+ + LK+  + +  D R 
Sbjct: 267 IGALVMMHGDDGGLRVPPRLAQIQAVVLAIKGDEAVLAKVRELGDRLKAAGVRVHVDDRT 326

Query: 589 E-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           +     +  +  +K +P+ I  G ++    +  + R      + VSL   + +L
Sbjct: 327 DIPFGRRAVDWELKGVPVRIEVGPRDLENGTAMLARRIPGGKEPVSLDALVSLL 380


>gi|300708012|ref|XP_002996195.1| hypothetical protein NCER_100753 [Nosema ceranae BRL01]
 gi|239605474|gb|EEQ82524.1| hypothetical protein NCER_100753 [Nosema ceranae BRL01]
          Length = 499

 Score =  153 bits (386), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 68/401 (16%), Positives = 138/401 (34%), Gaps = 59/401 (14%)

Query: 256 FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDS 313
           F    D  G       G+ I+  +  +   +I+    EE   P ++ +   + +  H   
Sbjct: 29  FLDYYDVKGCYILRPNGYFIWNEIRKWFTNEIEKLGVEECLFPMLIPKTFLEKEESHISD 88

Query: 314 YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP 373
           +   +  +    + +      A++P +       F   + S+R+LP+++ ++ ++ R E 
Sbjct: 89  FSPEVAWITKCGNEVLH-EPVAIRPTSETVMYPSFARWISSHRDLPLKVNQWCNILRWEL 147

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
            G+   L+R +     + H      E+   E L I +L   +YK+     ++  L T  E
Sbjct: 148 RGTT-PLIRSKEILWQEGHTAHIDKEEADKEVLDILDLYYRMYKELLAVPVIKGLKTETE 206

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
           K  GSD                                    Y    E  +  A      
Sbjct: 207 KFAGSD------------------------------------YSTTVEGFIPQAGKGIQA 230

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
             +  +  N    F+               +++  +G   R +GI +     +  L L P
Sbjct: 231 ATSHHLGQNFSKMFDVKVQVDDGVSD---FVYQNSWGMTTRSLGIAVMIHSDDKGLVLPP 287

Query: 553 ----IQAIVTT----------ITSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIRE 597
               IQ ++              +  ++    I N L    + +  D R+  T+ YK   
Sbjct: 288 KVAKIQVVIIPCGLSVKTSTEDKNKLLKVINRIKNQLLLSKIRVHIDDRDNVTVGYKFNH 347

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
             I+ +PI I  G K+  +  + I +  + T  + ++ D +
Sbjct: 348 WEIRGVPIRIEIGLKDLEKNEMCIYKRNTGTKNQYTIDDNV 388


>gi|158312212|ref|YP_001504720.1| prolyl-tRNA synthetase [Frankia sp. EAN1pec]
 gi|158107617|gb|ABW09814.1| prolyl-tRNA synthetase [Frankia sp. EAN1pec]
          Length = 471

 Score =  153 bits (386), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 66/415 (15%), Positives = 142/415 (34%), Gaps = 56/415 (13%)

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLD 301
            R ++ +  + +L         ++     G+ +++ + + +  R           P  + 
Sbjct: 15  PRWYQDVLDKAELADNGPVRGTMVI-RPYGYALWERMQADVDTRIKAAGAVNAYFPLFIP 73

Query: 302 QH-LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  L +++ H + +   +  V              ++P +            +SYR+LP+
Sbjct: 74  ESYLRREAEHVEGFSPELAVVTHGGGKEL-AEPVVVRPTSETVIGEYMAKWTQSYRDLPL 132

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
            L ++ +V R E    L   +R   F   + H         +       + + +Y++F  
Sbjct: 133 LLNQWANVVRWELRPRL--FLRTSEFLWQEGHT--AHADAADAAAYARRIALEVYREF-- 186

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
               +         VG                 T K      INT    G          
Sbjct: 187 ----MTSVLALPVFVG---------------AKTRKERFAGAINTMTCEGMM-------- 219

Query: 481 YILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
                  G+  Q  T   +  N    F+  ++     +    +     +GS  R IG +I
Sbjct: 220 -----GDGKALQMATSHELGQNFARAFDIDFLGPDGGRH---LAWTTSWGSSTRMIGGLI 271

Query: 540 ----ENFKGNLPLWLSPIQAIVTTITSS--AVEYAQEIANLLKSHHLSIETDFRNE-TIN 592
               ++    +P  L+P Q +V  +      V  A+EI + L +  +    D R   +  
Sbjct: 272 MAHGDDNGLRVPPVLAPTQVVVLPVRDDDAVVTKAREITDALTALGVRARLDARPGLSFG 331

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA---IPILTKE 644
            ++ +  +K IP+ +  G ++ +  ++ + R  +     V L +A   +P+L  E
Sbjct: 332 RRVTDAELKGIPVRVEVGPRDLAAGNVTLARRDTAEKFPVPLGEAAGRVPVLLDE 386


>gi|325577191|ref|ZP_08147675.1| proline--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
 gi|325160773|gb|EGC72894.1| proline--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
          Length = 571

 Score =  153 bits (386), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 64/329 (19%), Positives = 116/329 (35%), Gaps = 17/329 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q   +       E+    H+ + R   +  +A   SG+  W   GW++ + +   +R 
Sbjct: 3   TSQYLFSTLKETPAEAAIVSHQLMLRAGMIRPLA---SGLYNWMPTGWRVLRKVEKIIRE 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      EI  P V    LW++SG W+ Y   +   +   +     R F L P +    
Sbjct: 60  EMDKSGALEIKMPVVQPAELWEESGRWEQYGPELLRFEDRGN-----RHFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SYR+LP+ L +  + +R+E      G+MR R F   DA+ F        + 
Sbjct: 115 TDLVRREVSSYRQLPINLYQIQTKFRDEVRPRF-GVMRSREFIMKDAYSFHADHSSLQQT 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            + ++    +I+   G +   V+  T       S      A +    V+ + ++     I
Sbjct: 174 YEVMYQTYSNIFNRLGLDFRAVQADTGSIGGSASHEFQVLANSGEDDVIFSTESDYAANI 233

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
                +  G    P     L D          +   FNLP       +          ++
Sbjct: 234 ELAEAVAIGERAAPTKAMELVDT-PNAKTIAELVEQFNLPIEKTVKTLIVKGASEEQPLV 292

Query: 524 HRAVFGSIERFIGIMIENFKGNLPLWLSP 552
              + G  E     + E     LP   SP
Sbjct: 293 ALVIRGDHE-----LNEIKAEKLPEVASP 316



 Score = 91.0 bits (224), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 63/167 (37%), Gaps = 14/167 (8%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           I R  + G I Q+        NA           P+++    +G  + R +   IE +F 
Sbjct: 403 IKRGIEVGHIFQLGKKYSEAMNATVQGEDG---RPMVVTMGCYGIGVTRVVAAAIEQHFD 459

Query: 544 GNLPLWL----SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
               +W     +P    V  +    + S  EYA+E+   L++  + +  D R E      
Sbjct: 460 ERGIVWPTDEIAPFTVAVLPMNMHKSESVQEYAEELYCTLQAQGVEVIFDDRKERPGVMF 519

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +  +  +P +++ G+K  +   I  +   +   Q ++    +  L 
Sbjct: 520 ADMELIGVPHMVVIGEKNLANGEIEYKNRRTGEKQMIAKEQLLDFLK 566


>gi|237749052|ref|ZP_04579532.1| prolyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
 gi|229380414|gb|EEO30505.1| prolyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
          Length = 587

 Score =  153 bits (386), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 61/306 (19%), Positives = 116/306 (37%), Gaps = 17/306 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       ++E   H+ + R   +  +   GSG+  +   G ++   + + +R 
Sbjct: 11  ASQFFISTLKEAPADAEIISHKLMVRTGMIRRL---GSGIYAYMPMGLRVIHKIENIIRE 67

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LWQ++G W  Y   +  +K   D     R F ++P +    
Sbjct: 68  EMNRAGAVELLMPLVQPAELWQETGRWQKYGPELLRIKDRHD-----RDFIIQPTSEEVI 122

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
             +  + +KSYR+LP+      + +R+E      GLMR R FT  DA+ F    + +   
Sbjct: 123 TDIARNVIKSYRQLPINFYHIQTKFRDERRPRF-GLMRGREFTMKDAYSFDRDVDGLKKS 181

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              + +  + I+  FG +   V          GS      AE     ++ + ++     +
Sbjct: 182 YQIMFDAYVKIFTRFGLKFRPVAADNGAIGGSGSHEFHVIAETGEDALVYSRESEYAANM 241

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN------SHSEK 517
              + L   A        + K A      C  +    N P   +   +       +  EK
Sbjct: 242 EAAIALPPSAERAAATRSMQKVATPGQKACEDVTNFLNQPLSQSLKVIAAIRTDIAAGEK 301

Query: 518 CHPVMI 523
            H V+I
Sbjct: 302 GHFVVI 307



 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 67/174 (38%), Gaps = 17/174 (9%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFK 543
           AI R  + G + Q+        NA Y++ + +   P ++    +G  + R +G  IE   
Sbjct: 417 AIQRGIEVGHVFQLGTRYSEDMNASYLDENGK---PQLMQMGCYGIGVTRIVGAAIEQNN 473

Query: 544 GN----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            +     P  ++P + ++  +    + +  + A E+   LK   + +  D R E      
Sbjct: 474 DDKGIIWPTSIAPFEVVLCPLGYDRSEAVKKTADELYESLKQSGIDVIMDDRGERPGVMF 533

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD----AIPILTKES 645
            +  +  +P  I+ GD+   +  +  +    T    + + D     I  +  E 
Sbjct: 534 SDWELIGVPHRIVIGDRGLKDGKLEYQGRRDTEATAIPVGDMAQFVIAKVAAEK 587


>gi|300690369|ref|YP_003751364.1| proline--tRNA ligase [Ralstonia solanacearum PSI07]
 gi|299077429|emb|CBJ50055.1| Proline--tRNA ligase [Ralstonia solanacearum PSI07]
          Length = 574

 Score =  153 bits (386), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 60/301 (19%), Positives = 115/301 (38%), Gaps = 13/301 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       ++E   H+ + R   +  +   G+G+  +   G +  + +   +R 
Sbjct: 3   ASQFFISTLKEAPADAEIVSHKLMMRAGMIKKL---GAGIYTYMPVGLRAIRKVEQIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LWQ++G WD     +  VK      +  R   ++P +    
Sbjct: 60  EMNAAGAVEMLMPVVQPGELWQETGRWDKMGEELMRVKD-----RHERDLVIQPTSEEVV 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
             +    ++SY+++PV   +  + +R+E      G+MR R FT  DA+ F    E M   
Sbjct: 115 TDIARTEIRSYKQMPVNFYQIQTKFRDERRPRF-GIMRGREFTMKDAYSFDRDVEGMKVS 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             K+++    I++ FG E   V          GS      AE     ++ + ++     I
Sbjct: 174 YGKMYDAYTRIFQRFGLEFRAVAADNGAIGGSGSHEFHVIAETGEDAIVYSPESDYAANI 233

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI--QVDFNLPSRFNAFYVNSHSEKCHPV 521
                L   A  GP  E + K       +C  +  Q+   L     +  +    E   P 
Sbjct: 234 EAAEALAPAAPRGPATEPLAKTPTPGRAKCEAVAEQLGVALQRTVKSIVLAKDVEDGEPQ 293

Query: 522 M 522
           +
Sbjct: 294 I 294



 Score = 75.2 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 22/147 (14%), Positives = 56/147 (38%), Gaps = 11/147 (7%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G +  +        NA +++ +  K  P+++     G I R +G  IE       
Sbjct: 409 RGIEVGHVFMLGTRYSESMNATFLDENG-KTQPMVMGCYGIG-ITRILGAAIEQNYDARG 466

Query: 546 --LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
              P+ ++P + ++  +    + +    A  +   L +  + +  D R E       +  
Sbjct: 467 IIWPVSIAPFEVVICPVGYDRSEAVRAEADRLHAELAAAGIDVILDDRGERPGVMFADWE 526

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGS 626
           +  +P  ++ G++   E  + ++    
Sbjct: 527 LIGVPFRVVVGERGLKEGKLELQGRRD 553


>gi|330685707|gb|EGG97346.1| TGS domain protein [Staphylococcus epidermidis VCU121]
          Length = 121

 Score =  153 bits (386), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 55/119 (46%), Positives = 78/119 (65%), Gaps = 1/119 (0%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
             I + FPDG+ K F    T  D+A+SIS  L KKAVA   NG++ DL+ P+  +G IEI
Sbjct: 2   DQINIQFPDGNSKAFDKGTTTEDIAQSISPGLRKKAVAGKFNGQMVDLTRPLEEDGEIEI 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           +TP    +L V+RHS AH+MA+A++ ++ +V+  +GP+IE GFYYDFD E+ F    L 
Sbjct: 62  VTPGSDEALEVLRHSTAHLMAQALKRLYGDVKFGVGPVIEGGFYYDFDTEEKFHQMTLK 120


>gi|299065636|emb|CBJ36808.1| Proline--tRNA ligase [Ralstonia solanacearum CMR15]
          Length = 574

 Score =  153 bits (386), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 54/298 (18%), Positives = 111/298 (37%), Gaps = 13/298 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       ++E   H+ + R   +  +   G+G+  +   G ++ + +   +R 
Sbjct: 3   ASQFFISTLKEAPADAEIVSHKLMMRAGMIKKL---GAGLYTYMPVGLRVIRKVEQIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LWQ++G WD     M  VK      +  R   ++P +    
Sbjct: 60  EMNASGAVEVLMPVVQPAELWQETGRWDKMGDEMMRVKD-----RHERDLVIQPTSEEVV 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
             +    ++SY+++PV   +  + +R+E      G+MR R FT  DA+ F    E +   
Sbjct: 115 TDIARTEIRSYKQMPVNFYQIQTKFRDERRPRF-GIMRGREFTMKDAYSFDRDAEGLKVS 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             K++     I++ FG E   V          GS      A+     ++ +  +     I
Sbjct: 174 YEKMYGAYTRIFQRFGLEFRAVAADNGAIGGSGSHEFHVIADTGEDAIVYSPDSDYAANI 233

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI--QVDFNLPSRFNAFYVNSHSEKCH 519
                +      G   E + K    +  +C  +  Q+   L     +  +    +   
Sbjct: 234 EAAEAVAPATPRGAATEALTKTHTPKRAKCEAVAEQLGIALQRTVKSIVLAKDVDGGE 291



 Score = 79.4 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 64/183 (34%), Gaps = 19/183 (10%)

Query: 462 RINTGVLLGEGAFYGPKFEY---ILKDAIGRDWQCGTIQVDFN------LPSRFNAFYVN 512
            +N G  L E   Y  +         D  G    C  I+V              +A +++
Sbjct: 374 GVNWGRDLPEAEVYDLRNVVAGDPSPDGKGTLALCRGIEVGHVFMLGTRYSESMSATFLD 433

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTI----TSSA 564
            +  K  P+M+     G I R +G  IE          P+ ++P + ++  +    + + 
Sbjct: 434 ENG-KTQPMMMGCYGIG-ITRILGAAIEQNYDARGIIWPVSIAPFEVVICPVGYDRSEAV 491

Query: 565 VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRF 624
              A  +   L +  + +  D R E       +  +  +P  ++ G++   E  + ++  
Sbjct: 492 RAEADRLHAELAAAGIDVILDDRGERPGAMFADWELIGVPFRVVVGERGLKEGKLELQGR 551

Query: 625 GST 627
              
Sbjct: 552 RDE 554


>gi|111225872|ref|YP_716666.1| prolyl-tRNA synthetase [Frankia alni ACN14a]
 gi|123337919|sp|Q0RBM4|SYP_FRAAA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|111153404|emb|CAJ65160.1| Prolyl-tRNA synthetase (Proline--tRNA ligase) [Frankia alni ACN14a]
          Length = 468

 Score =  153 bits (386), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 63/397 (15%), Positives = 141/397 (35%), Gaps = 53/397 (13%)

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
            R ++ +  + +L         ++     G+ I++ + + +  +IK         P  + 
Sbjct: 12  PRWYQDVLAKAELADNGPVRGTMVI-RPYGYAIWERMQADVDARIKAAGAVNAYFPLFIP 70

Query: 302 QH-LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  L +++ H + +   +  V        +     ++P +            +SYR+LP+
Sbjct: 71  ESYLRREAEHVEGFSPELAVVTIGGGKELE-EPVVVRPTSETIIGEYLAKWTQSYRDLPL 129

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
            L ++ +V R E    L   +R   F   + H                 + + +Y+DF  
Sbjct: 130 LLNQWANVVRWELRPRL--FLRSSEFLWQEGHTAHVD--EAEAAAYARRIALEVYRDF-- 183

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
               +         +G+    +                             GA      E
Sbjct: 184 ----LTDVLAIPVFIGTKTRKERF--------------------------AGATNTMTCE 213

Query: 481 YILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
            ++ D  G+  Q  T   +  N    F+  ++ +   K    +     +GS  R +G +I
Sbjct: 214 GMMGD--GKALQMATSHELGQNFARAFDIDFLGADGAKH---LAWTTSWGSSTRMVGGLI 268

Query: 540 ----ENFKGNLPLWLSPIQAIVTTITSS--AVEYAQEIANLLKSHHLSIETDFRNE-TIN 592
               ++    +P  L+P Q +V  +      V  A+EIA  L    L ++ D R+  +  
Sbjct: 269 MAHGDDNGLRIPPRLAPTQVVVLPVRDDETVVAKAREIAAALTDAGLRVQVDARSGLSFG 328

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
            ++ +  IK IP+ +  G ++ +  ++ + R  ++  
Sbjct: 329 RRVTDAEIKGIPVRVEVGPRDLAAGNVTLVRRDTSVK 365


>gi|222636488|gb|EEE66620.1| hypothetical protein OsJ_23204 [Oryza sativa Japonica Group]
          Length = 545

 Score =  153 bits (386), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 64/411 (15%), Positives = 147/411 (35%), Gaps = 60/411 (14%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           +    +          +  +    +L         ++     G+ I++ +  Y+  K K+
Sbjct: 63  DREGQVTPRSVDFNAWYTDVIAAAELADYGPVRGTMVI-RPYGYAIWEAIQDYLNVKFKE 121

Query: 290 -DYEEINTPQVLDQHL-WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
             +  +  PQ +      +++ H + +   +  V        + +   ++P +      +
Sbjct: 122 TGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEK-LVVRPTSETIVNHM 180

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLK 406
           F   ++SYR+LP+ + ++ +V R E        +R   F   + H    T E+   E ++
Sbjct: 181 FTKWIQSYRDLPLMINQWANVTRWEMR--TKPFIRTLEFLWQEGHTAHATLEEAEKEAMQ 238

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           + ++      +     ++    +R E   G                              
Sbjct: 239 MIDVYTKFAYEQAAIPVIPGRKSRVETFAG------------------------------ 268

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
                 A      E ++ D   +  Q GT   +  N    F   +++ +S+  H   + +
Sbjct: 269 ------ANRTYTIEAMMGDR--KALQAGTSHNLGQNFSRAFGTQFMDENSQIEH---VWQ 317

Query: 526 AVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTI------TSSAVEYAQEIANLL 575
             +    RF+G +I     +    LP  ++PIQ ++  I       S+ +E    + N L
Sbjct: 318 TSWAISTRFVGGIIMTHGDDAGLMLPPNIAPIQVVIVPIWKKGDEKSAVMEAVSSVQNTL 377

Query: 576 KSHHLSIETDFRN-ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
           K   + ++ D     T  +K   + +K +PI +  G ++ + +S+ I R  
Sbjct: 378 KEAGIRVKVDDSELRTPGWKFNFYEMKGVPIRLEIGPRDVTNKSVVISRRD 428


>gi|224014080|ref|XP_002296703.1| prolyl-trna synthetase [Thalassiosira pseudonana CCMP1335]
 gi|220968558|gb|EED86904.1| prolyl-trna synthetase [Thalassiosira pseudonana CCMP1335]
          Length = 521

 Score =  153 bits (386), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 75/449 (16%), Positives = 152/449 (33%), Gaps = 56/449 (12%)

Query: 209 RGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFW 268
           + D   P  + +        +      +  EE+    +  +    ++     D SG    
Sbjct: 6   KKDPGAPKSANVNKKQTKKGETQLALKWRKEENFAMWYSDVIVLSEMISY-YDISGCYIL 64

Query: 269 HRKGWKIFQTLISYMRRKIKDDYEEINTPQVL--DQHLWQQSGHWDSYRANMFAVKCADD 326
               +KI++ +  +   +IK    E +   +      L ++  H + +   +  V  + D
Sbjct: 65  RPWSYKIWELIQDWFNIQIKKLGVENSYFPMFVSQDRLEKEKDHVEGFAPEVAWVTRSGD 124

Query: 327 TIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
             +  +  A++P +       F   ++S+R+LP++L ++ +V R E        +R R F
Sbjct: 125 -GELAQPIAVRPTSETIMYPAFADWIRSHRDLPLKLNQWSNVVRWEFKDPT-PFLRTREF 182

Query: 387 TQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
              + H    + E      ++  +L   +Y++     ++    T  EK  G         
Sbjct: 183 LWQEGHTAHASYEDADVMVMQALDLYRRVYEELLAIPVIPGYKTEKEKFAGGHQ------ 236

Query: 446 NIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSR 505
                                             E  +    GR  Q  T    +    +
Sbjct: 237 ------------------------------TTTVEAYIP-VSGRAIQGATSHNLWQNFGK 265

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTIT 561
              F +N   EK    +  +  +G   R IG+MI    ++    LP  ++P QA++  I 
Sbjct: 266 --MFDINYQDEKGETKIAWQTSWGLTTRTIGVMIMVHGDDTGLVLPPMVAPQQAVIIPIV 323

Query: 562 SSAVE------YAQEIANLLKSHHLSIETDFRN-ETINYKIREHSIKKIPIIIICGDKEA 614
           S +        Y ++I   L+   +  + D R      +K      K +PI I  G ++ 
Sbjct: 324 SKSCPLENLSGYCEDILKSLEEKGIRAKLDDRLIYNPGWKYAHWEQKGVPIRIEVGPRDL 383

Query: 615 SERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +R   +          VS+      + K
Sbjct: 384 EKRQARMVVRFGGEKIDVSVDTIASDIEK 412


>gi|33146799|dbj|BAC79747.1| putative prolyl-tRNA synthetase [Oryza sativa Japonica Group]
          Length = 545

 Score =  153 bits (386), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 64/411 (15%), Positives = 147/411 (35%), Gaps = 60/411 (14%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
           +    +          +  +    +L         ++     G+ I++ +  Y+  K K+
Sbjct: 63  DREGQVTPRSVDFNAWYTDVIAAAELADYGPVRGTMVI-RPYGYAIWEAIQDYLNVKFKE 121

Query: 290 -DYEEINTPQVLDQHL-WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
             +  +  PQ +      +++ H + +   +  V        + +   ++P +      +
Sbjct: 122 TGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEK-LVVRPTSETIVNHM 180

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLK 406
           F   ++SYR+LP+ + ++ +V R E        +R   F   + H    T E+   E ++
Sbjct: 181 FTKWIQSYRDLPLMINQWANVTRWEMR--TKPFIRTLEFLWQEGHTAHATLEEAEKEAMQ 238

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           + ++      +     ++    +R E   G                              
Sbjct: 239 MIDVYTKFAYEQAAIPVIPGRKSRVETFAG------------------------------ 268

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
                 A      E ++ D   +  Q GT   +  N    F   +++ +S+  H   + +
Sbjct: 269 ------ANRTYTIEAMMGDR--KALQAGTSHNLGQNFSRAFGTQFMDENSQIEH---VWQ 317

Query: 526 AVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTI------TSSAVEYAQEIANLL 575
             +    RF+G +I     +    LP  ++PIQ ++  I       S+ +E    + N L
Sbjct: 318 TSWAISTRFVGGIIMTHGDDAGLMLPPNIAPIQVVIVPIWKKGDEKSAVMEAVSSVQNTL 377

Query: 576 KSHHLSIETDFRN-ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
           K   + ++ D     T  +K   + +K +PI +  G ++ + +S+ I R  
Sbjct: 378 KEAGIRVKVDDSELRTPGWKFNFYEMKGVPIRLEIGPRDVTNKSVVISRRD 428


>gi|325193707|emb|CCA27955.1| prolyltRNA synthetase putative [Albugo laibachii Nc14]
          Length = 697

 Score =  153 bits (386), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 76/444 (17%), Positives = 155/444 (34%), Gaps = 61/444 (13%)

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR 284
              Q+      Y   E+    + ++  +  +     D SG        ++I++ +  ++ 
Sbjct: 188 PTEQKAHEGLGYTRAENFGEWYTEVITKSGMIEY-YDISGCYILRPYSYEIWEKIQGFLD 246

Query: 285 RKIKD-DYEEINTPQ-VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
            +IK    +    P  V ++ L ++  H + +   +  V  +  +       A++P +  
Sbjct: 247 TRIKSIGVKNCYFPIFVSNEKLQREKDHLEGFAPEVAWVTKSGSSDL-KEPIAIRPTSET 305

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMF 401
                F + ++S+R+LP++L ++ +V R E        +R R F   + H    TK +  
Sbjct: 306 IMYPAFKNWIRSHRDLPLKLNQWNNVVRWEFKNPT-PFIRTREFLWQEGHTAHATKAEAD 364

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            +  +I +   + Y++                                     +      
Sbjct: 365 EQVHQILDFYAAAYEEL------------------------------------LAVPMIK 388

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
            I T      GA Y    E  +           + Q+  N    F         +K  P 
Sbjct: 389 GIKTEKEKFAGADYTTTIEGFIPSTGRGIQAATSHQLGQNFGKMFGIAAEYEAGKKLIPF 448

Query: 522 MIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI-------TSSAVEYAQE 570
              +  +G   R IGIMI    ++    LP  ++P+Q I+  I              A++
Sbjct: 449 ---QTSWGFTTRSIGIMIMVHGDDKGLVLPPRIAPLQVIIVPIPYKDRQEIDEISNQAKD 505

Query: 571 IANLLKSHHLSIETDFRN-ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           +  LL+S  + ++ D R   T  +K     +K +P+    G K+   R + + R  +   
Sbjct: 506 VCQLLESVGVRVQVDDRQVYTPGWKYNFWELKGVPLRFEIGPKDVVNRQVRVVRRDNGVK 565

Query: 630 QKVSLLDA---IPILTKESLPPDC 650
             + + +    IP L  E +  D 
Sbjct: 566 TDIPVYELSTSIPALL-EGIQSDM 588


>gi|156103089|ref|XP_001617237.1| bifunctional aminoacyl-tRNA synthetase [Plasmodium vivax SaI-1]
 gi|148806111|gb|EDL47510.1| bifunctional aminoacyl-tRNA synthetase, putative [Plasmodium vivax]
          Length = 765

 Score =  153 bits (386), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 72/394 (18%), Positives = 136/394 (34%), Gaps = 57/394 (14%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEIN--TPQVLDQHLWQQSGHWDSYRAN 317
            D SG        + I++ + ++  ++IK    E +     V    L ++  H + +   
Sbjct: 298 YDISGCYILRPASYYIWECVQAFFNKEIKKLDVENSYFPLFVTKNKLEREKNHIEGFSPE 357

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           +  V    D+       A++P +     +VF+  ++S+R+LP++L ++ +V R E     
Sbjct: 358 VAWVTKYGDSTLP-EEIAIRPTSETIMYSVFSKWIRSHRDLPLKLNQWNTVVRWEFKQPT 416

Query: 378 HGLMRVRGFTQDDAHVFCT-KEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
              +R R F   + H     +E+       I +L    Y+                    
Sbjct: 417 -PFIRTREFLWQEGHTAHKNEEEAVKMVFDILDLYRRWYE-------------------- 455

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
                           + +       I +      GA +    E       GR  Q  T 
Sbjct: 456 ----------------ECLAVPIIKGIKSEGEKFGGANFTSTAE-AFISENGRAIQAATS 498

Query: 497 QV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI-- 553
                N    F   + + +  K +   +H+  +G   R IGIMI     +  L L P   
Sbjct: 499 HYLGTNFAKMFKIEFEDENETKQY---VHQTSWGCTTRSIGIMIMTHGDDKGLVLPPKVA 555

Query: 554 --QAIVTTITSSAVE------YAQEIANLLKSHHLSIETDFRN-ETINYKIREHSIKKIP 604
             + ++  I     +      Y ++I  +LKS  ++   D R+  +  YK     ++ +P
Sbjct: 556 KFKVVIVPILYKNTDENVIFNYCKDIEKVLKSAQINCIFDDRDLYSPGYKFNHWELRGVP 615

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           I I  G K+    S    R  +     V     +
Sbjct: 616 IRIEVGPKDIQNNSCLCVRRDTNEKFNVKKESVL 649


>gi|148827919|ref|YP_001292672.1| prolyl-tRNA synthetase [Haemophilus influenzae PittGG]
 gi|166980128|sp|A5UHN3|SYP_HAEIG RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|148719161|gb|ABR00289.1| prolyl-tRNA synthetase [Haemophilus influenzae PittGG]
          Length = 572

 Score =  153 bits (386), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 62/329 (18%), Positives = 119/329 (36%), Gaps = 17/329 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q   +       +++   H+ + R   +  +A   SG+  W   G ++ + +   +R 
Sbjct: 3   TSQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMA---SGLYNWLPTGIRVLKKVEKIIRE 59

Query: 286 KIKDD-YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LW++SG WD Y   +   +   +     R F L P +    
Sbjct: 60  EMNKGGAIEVLMPVVQPAELWEESGRWDQYGPELLRFEDRGN-----RNFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP+ L +  + +R+E      G+MR R F   DA+ F T ++     
Sbjct: 115 TDLVRREVSSYKQLPLNLYQIQTKFRDEVRPRF-GVMRSREFIMKDAYSFHTTQESLQAT 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++ +  +I+   G +   V+  T       S      A +    V+ + ++     I
Sbjct: 174 YDVMYQVYSNIFNRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVFSTESDFAANI 233

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
                +  G    P  E  L D          +   FNLP       +       +  ++
Sbjct: 234 ELAEAIAIGERQAPTAEMCLVDT-PNAKTIAELVEQFNLPIEKTVKTLIVKGADENQPLV 292

Query: 524 HRAVFGSIERFIGIMIENFKGNLPLWLSP 552
              + G  E     + E      PL   P
Sbjct: 293 ALIIRGDHE-----LNEIKAQKHPLVADP 316



 Score = 91.8 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 63/168 (37%), Gaps = 14/168 (8%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           I R  + G I Q+         A       +   P+++    +G  + R +   IE +  
Sbjct: 403 IKRGIEVGHIFQLGKKYSEAMKATVQGEDGK---PLVMTMGCYGIGVTRVVASAIEQHHD 459

Query: 544 GNLPLWL----SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
               +W     +P    +  +    + +  +YA+E+   L+S  + +  D R E      
Sbjct: 460 ERGIIWPSDEIAPFTVAIVPMNMHKSEAVQKYAEELYRTLQSQGVDVIFDDRKERPGVMF 519

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +  +  IP +++ G+K      I  +   +   + +S    + +L +
Sbjct: 520 ADMELIGIPHMVVIGEKNLDNGEIEYKNRRTGEKEMISKDKLLSVLNE 567


>gi|311898556|dbj|BAJ30964.1| putative prolyl-tRNA synthetase [Kitasatospora setae KM-6054]
          Length = 470

 Score =  153 bits (386), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 67/414 (16%), Positives = 152/414 (36%), Gaps = 53/414 (12%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINT 296
             E   R ++ L  + +L         ++     G+ +++ +   M  R  K   +    
Sbjct: 10  QAEDFPRWYQDLINKAELADNGPVRGTMVI-RPYGYGLWERMQQEMDARIKKAGAQNAYF 68

Query: 297 PQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P  + Q    +++ H + +   +  V        +     ++P +       F+  ++S+
Sbjct: 69  PMFIPQSYLTKEAEHVEGFAPELAVVTHGGGKELE-EPVVVRPTSETIINEYFSKWVQSH 127

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           R+LP+ + ++ +V R E        +R   F   + H                       
Sbjct: 128 RDLPLLINQWANVVRWELRP--RVFLRTTEFLWQEGHTAHAT------------------ 167

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                     + +     R+ +D   D   N++   +   + ++++R         GA  
Sbjct: 168 ---------YEDARAYASRIHTDVYGDFMTNVLGIDVVLGRKTAKERF-------AGAIN 211

Query: 476 GPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
               E ++ D  G+  Q GT   +  N    FN  Y    +E+ H   + +  +G   R 
Sbjct: 212 TLTLEGMMGD--GKALQMGTSHELGQNFAKAFNTTYQLQGAEREH---VWQTSWGVSTRM 266

Query: 535 IGIMI----ENFKGNLPLWLSPIQAIVTTIT--SSAVEYAQEIANLLKSHHLSIETDFRN 588
           +G +I    ++    +P  L+ +QA+V  I    + +   +EI   L++  + +  D R 
Sbjct: 267 VGGLIMSHGDDNGLRVPPRLAAVQAVVLAIKGEDAVLAKVREIGAQLEAAGVRVVVDDRT 326

Query: 589 ETI-NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           +T    +  +  +K +P+ I  G ++    +  + R  +   + VS+     I+
Sbjct: 327 DTPFGRRAVDWELKGVPLRIEVGPRDLEAGTAMLVRRIAGGKEPVSVDSLAAIV 380


>gi|261338808|ref|ZP_05966666.1| hypothetical protein ENTCAN_05003 [Enterobacter cancerogenus ATCC
           35316]
 gi|288318631|gb|EFC57569.1| proline--tRNA ligase [Enterobacter cancerogenus ATCC 35316]
          Length = 572

 Score =  153 bits (386), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 54/250 (21%), Positives = 101/250 (40%), Gaps = 11/250 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGVRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E+  P V    LWQ+SG W+ Y   +  +    D     R F L P +    
Sbjct: 60  EMNNAGAIEVLMPVVQPSELWQESGRWEQYGPELLRIADRGD-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLIRNELSSYKQLPLNFFQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHTSQESLQET 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             K++     I+   G +   V+  T       S      A++    V+ +  +     I
Sbjct: 174 YDKMYEAYSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVIFSDSSDYAANI 233

Query: 464 NTGVLLGEGA 473
                L   A
Sbjct: 234 EFAEALAPKA 243



 Score = 85.2 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 33/176 (18%), Positives = 59/176 (33%), Gaps = 11/176 (6%)

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFI 535
           P  +      I R  + G I    +  SR  A       E     ++    +G  + R +
Sbjct: 395 PSPDGQGTLMIKRGIEVGHIFQLGDKYSR--AMNAAVQGEDGRNQVLTMGCYGIGVTRVV 452

Query: 536 GIMIENF----KGNLPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDFR 587
              IE          P  ++P Q  +  +         E A+++   L++  + +  D R
Sbjct: 453 AAAIEQNFDERGIVWPDNIAPFQVAILPMNMHKSYRVQELAEKLYAELRAQGVDVLMDDR 512

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            E       +  +  IP  I+ GD+      I  +   S   Q +   D +  L K
Sbjct: 513 KERPGVMFADMELIGIPHTIVIGDRNLDSDEIEYKYRRSGEKQMIKTGDILDYLMK 568


>gi|301320495|gb|ADK69138.1| proline--tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str.
           Gladysdale]
          Length = 474

 Score =  153 bits (385), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 70/376 (18%), Positives = 138/376 (36%), Gaps = 54/376 (14%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAV 321
           G + +   G++I++ +  Y+  + K  + + +  P ++ + L+ ++  H + +   +  V
Sbjct: 36  GTMIFRPYGYRIWELIQKYLDEEFKKVNVDNVYFPLLIPESLFNKEKDHIEGFSPEIATV 95

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
                  K      ++P +    +  F++ + SYR+LP+   ++ +V R E   +    +
Sbjct: 96  TRVGQK-KLEENLFIRPTSEVVMMDYFSNEINSYRDLPLIYNQWCNVMRWEK--TTRPFL 152

Query: 382 RVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           R   F   + H   +   +  N CLKI N+     K+     ++    T  EK  G    
Sbjct: 153 RTSEFLWQEGHTVHSSYNEAENFCLKILNIYEKFAKEILLLPVICGKKTEKEKFAG---- 208

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDF 500
                                           A      E ++ D  G+  QCGT     
Sbjct: 209 --------------------------------AKDTYTIESLMFD--GQALQCGTSHFFA 234

Query: 501 NLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP------IQ 554
           +  ++   + +   +++      +   +G   R IG +I     +  L L        IQ
Sbjct: 235 DNFTK--VYDIKFQNKENKLEHAYSTSWGVSTRLIGALIMTHSDDNGLVLPSKISPIQIQ 292

Query: 555 AIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
            I    T    +  + I + L      I+ D  +++  +KI E  IK IPI I  G ++ 
Sbjct: 293 IIQIKNTEQIDQVVENIKDKLSD--YRIDVDNSDKSFGFKISEAEIKGIPIRIEIGPRDL 350

Query: 615 SERSIGIRRFGSTTTQ 630
               I I R      +
Sbjct: 351 ENNQITISRRDQQENK 366


>gi|169632514|ref|YP_001706250.1| prolyl-tRNA synthetase [Acinetobacter baumannii SDF]
 gi|226695258|sp|B0VRW9|SYP_ACIBS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|169151306|emb|CAP00010.1| prolyl-tRNA synthetase [Acinetobacter baumannii]
          Length = 571

 Score =  153 bits (385), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 73/427 (17%), Positives = 148/427 (34%), Gaps = 47/427 (11%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++           ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSRFLFATLRETPNDAEVISHQLMLRAGMIRKLA---SGLYTWLPMGTRVLKKVDAIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P      LW++SG ++ Y   +   K   D       F L P +    
Sbjct: 60  EMNRSGAMEVFMPVTQPASLWEESGRYEQYGPGLLRFKDRHDNP-----FVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + LKSY++LPV   +  + +R+E      G+MR R F   DA+ F   ++   E 
Sbjct: 115 TDLARNELKSYKQLPVNFYQIQTKFRDEIRPRF-GVMRSREFIMKDAYSFHATQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +++    I+   G +   V+  T       S      A +    +  + ++     +
Sbjct: 174 YNVMYDTYSRIFTRLGLDFRPVQADTGSIGGSASHEFHVLAASGEDDIAFSTESDYAANV 233

Query: 464 N--TGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF--NAFYVNSHSEKCH 519
                VL+GE A   P  E+ L +   +       Q     P +            EK +
Sbjct: 234 EMAEAVLVGERA--APTQEFKLVETPNQKTIADVCQFLNADPKQSVKALLVQGVADEKGN 291

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP------IQAIVTTITSSAVEYAQEIAN 573
             ++   + G  E     + E      PL  +P       Q     +T+           
Sbjct: 292 VPVVALFLRGDHE-----LNEIKAEKHPLVAAPLAFATEEQLQAFGLTAGFTGP-----Q 341

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR-RFGSTTTQKV 632
            L    +++  D     ++               + G  EA + ++G+     +  T+  
Sbjct: 342 GLVEKGITVIVDRAASVLSD-------------FVAGANEADKHAVGVNWERDAQITEVF 388

Query: 633 SLLDAIP 639
            L + + 
Sbjct: 389 DLRNVVE 395



 Score = 87.9 bits (216), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 25/162 (15%), Positives = 57/162 (35%), Gaps = 13/162 (8%)

Query: 492 QCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGNLPL 548
           + G I Q+            +    +   P  +    +G  + R +   IE N+     +
Sbjct: 413 EVGHIFQLGTKYSEALGCKVLGEDGK---PFTVTMGCYGIGVTRVVAAAIEQNYDDKGII 469

Query: 549 WL---SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           W    +P +  +  +    +   +E A+ +   L++    +  D RNE    K  +  + 
Sbjct: 470 WPQAIAPFEIAIVPMNAHKSPRTLEAAEALYAELQAQGFDVLLDDRNERPGVKFSDLELM 529

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            IP  I+ G+K     +   +         ++  + +  L +
Sbjct: 530 GIPHRIVIGEKGLDAGTFEYKGRRDAEASNLTKEELLAKLAR 571


>gi|299768873|ref|YP_003730899.1| prolyl-tRNA synthetase [Acinetobacter sp. DR1]
 gi|298698961|gb|ADI89526.1| prolyl-tRNA synthetase [Acinetobacter sp. DR1]
          Length = 571

 Score =  153 bits (385), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 73/426 (17%), Positives = 148/426 (34%), Gaps = 45/426 (10%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++           ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   ASRFLFATLRETPNDAEVISHQLMLRAGMIRKLA---SGLYTWLPMGTRVLKKVDAIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P      LW++SG ++ Y   +   K      +    F L P +    
Sbjct: 60  EMNRSGAMEVFMPVTQPASLWEESGRYEQYGPELLRFKD-----RHTNPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + LKSY++LPV   +  + +R+E      G+MR R F   DA+ F   ++   E 
Sbjct: 115 TDMARNELKSYKQLPVNFYQIQTKFRDEIRPRF-GVMRSREFIMKDAYSFHATQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +++    I+   G +   V+  T       S      A +    +  + ++     +
Sbjct: 174 YDVMYDTYSRIFTRLGLDFRPVQADTGSIGGSASHEFHVLAASGEDDIAFSTESDYAANV 233

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGR---DWQCGTIQVDFNLPSRFNAFYVNSHSEKCHP 520
                +  GA   P  E+ L +   +   D  C  +  D     +       +  +   P
Sbjct: 234 EMAEAVLVGARAAPTQEFKLVETPNQKTIDDVCQFLNADPKQSVKALLVQGVADEKGNVP 293

Query: 521 VMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIA------NL 574
           V +   V G  E     + E      PL  +P      T  + A   A  +         
Sbjct: 294 V-VALFVRGDHE-----LNEIKAEKHPLVAAP-----LTFATEAQLQAFGLTAGFTGPQG 342

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR-RFGSTTTQKVS 633
           L    L++  D     ++               + G  EA + ++G+     +  T+   
Sbjct: 343 LVEKGLTVIVDRAASVLSD-------------FVAGANEADKHAVGVNWERDAQITEVFD 389

Query: 634 LLDAIP 639
           L + + 
Sbjct: 390 LRNVVE 395



 Score = 89.5 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 58/167 (34%), Gaps = 13/167 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE---- 540
           I R  + G I Q+            +    +   P  +    +G  + R +   IE    
Sbjct: 408 IKRGIEVGHIFQLGTKYSEALGCKVLGEDGK---PFTVTMGCYGIGVTRVVAAAIEQNYD 464

Query: 541 NFKGNLPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +     P  ++P +  +  +    +   +E A+ +   L++    +  D RNE    K  
Sbjct: 465 DKGIMWPQAIAPFEIAIVPMNAHKSPRTLEAAEALYAELQAQGFDVLLDDRNERPGVKFS 524

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  +  IP  I+ G+K     +   +         ++  + +  L +
Sbjct: 525 DLELMGIPHRIVIGEKGLDAGTFEYKGRRDAEASNLTKEELLAKLAR 571


>gi|148887021|sp|Q0VRL1|SYP_ALCBS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
          Length = 572

 Score =  153 bits (385), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 46/248 (18%), Positives = 92/248 (37%), Gaps = 11/248 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L        ++    H+ + R   +  +A   SG+  W   G ++ + +   +R 
Sbjct: 3   TSQYLLATVKETPADAVVTSHQLMLRAGMVRKLA---SGLYTWLPSGLRVLRKVEQVIRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +E+  P V    LW++SG   +Y   +  +    +       F L P +    
Sbjct: 60  EMDRAGAQEVLMPVVQPMELWEESGRAPAYGPELLRITDRHNNP-----FCLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP    +  + +R+E      G+MR R F   DA+ F T      + 
Sbjct: 115 TDMVRNELHSYKQLPANFYQIQTKFRDEIRPRF-GIMRSREFIMKDAYSFHTNMDSLADT 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            + +H    +I+   G +   V+  T       S      AE+    +  +  +     +
Sbjct: 174 YQIMHRAYCAIFDRLGLDYRPVEADTGAIGGAASHEFHVLAESGEDDIAFSDGSDYAANV 233

Query: 464 NTGVLLGE 471
                L  
Sbjct: 234 ELAEALAP 241



 Score = 80.6 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 26/169 (15%), Positives = 64/169 (37%), Gaps = 14/169 (8%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFK 543
            I R  + G I Q+         A  ++ + +    V++    +G  + R +   IE   
Sbjct: 402 TIKRGIEVGHIFQLGTKYSEALGATVLDENGKS---VVMPMGCYGIGVTRVVAAAIEQNN 458

Query: 544 GN----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRN-ETINYK 594
            +     P  ++P Q  +  +    +    E A+++   L +  + +  D R  E +  K
Sbjct: 459 DDRGIIWPEAIAPFQVALVPVNIKKSPRERELAEKLYAELTAMGIEVLFDDREKERLGVK 518

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           + +  +  IP  I+  ++      +  +        +V++ + +  L +
Sbjct: 519 LADTELLGIPHRIVIAERGMDNGVLEYKGRRDADKTEVAMDEIVAFLKE 567


>gi|145630468|ref|ZP_01786248.1| frataxin-like protein [Haemophilus influenzae R3021]
 gi|144983858|gb|EDJ91300.1| frataxin-like protein [Haemophilus influenzae R3021]
          Length = 572

 Score =  153 bits (385), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 62/329 (18%), Positives = 120/329 (36%), Gaps = 17/329 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q   +       +++   H+ + R   +  +A   SG+  W   G ++ + +   +R 
Sbjct: 3   TSQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMA---SGLYNWLPTGIRVLKKVEKIIRE 59

Query: 286 KIKDD-YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LW++SG W+ Y   +   +   +     R F L P +    
Sbjct: 60  EMNKGGAIEVLMPVVQPAELWEESGRWEQYGPELLRFEDRGN-----RNFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP+ L +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLVRREVSSYKQLPLNLYQIQTKFRDEVRPRF-GVMRSREFIMKDAYSFHTTQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++ +  +I+   G +   V+  T       S      A +    V+ + ++     I
Sbjct: 174 YDVMYQVYSNIFNRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVFSTESDFAANI 233

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
                +  G    P  E  L D          +   FNLP       +       +  ++
Sbjct: 234 ELAEAVAIGERQAPTAEMCLVDT-PNAKTIAELVEQFNLPIEKTVKTLIVKGADENQPLV 292

Query: 524 HRAVFGSIERFIGIMIENFKGNLPLWLSP 552
              + G  E     + E      PL   P
Sbjct: 293 ALIIRGDHE-----LNEIKAQKHPLVADP 316



 Score = 91.8 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 27/168 (16%), Positives = 63/168 (37%), Gaps = 14/168 (8%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           I R  + G I Q+         A       +   P+++    +G  + R +   IE +  
Sbjct: 403 IKRGIEVGHIFQLGKKYSEAMKATVQGEDGK---PLVMTMGCYGIGVTRVVASAIEQHHD 459

Query: 544 GNLPLWL----SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
               +W     +P    +  +    + +  +YA+E+   L+S  + +  D R E      
Sbjct: 460 ERGIIWPSDEIAPFTVAIVPMNMHKSEAVQKYAEELYRTLQSQGVDVIFDDRKERPGVMF 519

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +  +  +P +++ G+K      I  +   +   + +S    + +L +
Sbjct: 520 ADMELIGVPHMVVIGEKNLDNGEIEYKNRRTGEKEMISKDKLLSVLNE 567


>gi|120554655|ref|YP_959006.1| prolyl-tRNA synthetase [Marinobacter aquaeolei VT8]
 gi|152112927|sp|A1U1F0|SYP_MARAV RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|120324504|gb|ABM18819.1| prolyl-tRNA synthetase [Marinobacter aquaeolei VT8]
          Length = 577

 Score =  153 bits (385), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 46/249 (18%), Positives = 91/249 (36%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  +        ++E   H+ + R   +  +A    G+  W   G +  + +   +R 
Sbjct: 3   ASRYLIATQKETPSDAEIISHQLMLRAGMIRKLAA---GLYTWLPLGLRTLRKVERIVRE 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +E+  P V    LWQ+SG W+ Y   +  +       +  R F   P +    
Sbjct: 60  EMDKSGAQEVLMPAVQPAELWQESGRWEQYGGELLRLND-----RHGRDFCFGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT-KEQMFNE 403
             +  + LKSY+ELP    +  + +R+E      G+MR R F   DA+ F    E +   
Sbjct: 115 TDLIRNELKSYKELPANFYQIQTKFRDERRPRF-GVMRAREFIMKDAYSFHLNAESLDET 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +H    +I+   G +   V+  +       S      A +    ++ +        I
Sbjct: 174 YKVMHQTYCNIFDRLGLDYRPVQADSGSIGGSSSHEFHVLASSGEDAIVFSTSGDYAANI 233

Query: 464 NTGVLLGEG 472
                +   
Sbjct: 234 EKAEAVAPA 242



 Score = 84.1 bits (206), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 57/167 (34%), Gaps = 9/167 (5%)

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN- 545
           I R  + G I    N  S+     V     K   + +     G   R +   IE      
Sbjct: 407 IRRGIEVGHIFKLGNKYSKAMNASVLDEHGKTSIMEMGCYGIGVS-RIVAASIEQNHDEK 465

Query: 546 ---LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
               P  ++P +  + T+    +    E   ++   L+     +  D RNE    K  + 
Sbjct: 466 GIIWPDAIAPFEVAIVTLNGHKSPVVAEAGDKLYEQLRQAGYDVLLDDRNERPGVKFADI 525

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
            +  IP   +  ++  S  ++  +       Q + + +A+  L K S
Sbjct: 526 ELIGIPHRFVVSERGLSAGTLEYKGRRDEEKQDIPVDEALSFLVKAS 572


>gi|332534597|ref|ZP_08410430.1| prolyl-tRNA synthetase [Pseudoalteromonas haloplanktis ANT/505]
 gi|332035947|gb|EGI72427.1| prolyl-tRNA synthetase [Pseudoalteromonas haloplanktis ANT/505]
          Length = 574

 Score =  153 bits (385), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 53/248 (21%), Positives = 98/248 (39%), Gaps = 11/248 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L        ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYILATLKETPSDAEIVSHQLMLRAGMIRRVA---SGLYTWLPSGLRVLRKVENIVRE 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P +    LW++SG W+ +   +        T +  RTFAL P +    
Sbjct: 60  EMDKAGAIEMLMPVIQPADLWEESGRWNEFGPELMRF-----TDRHNRTFALGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
                  + SY++LPV L +  +  R+E      G+MR R FT  DA+ F   E+  +  
Sbjct: 115 TDFVRKEISSYKQLPVTLYQVQTKVRDERRPRF-GVMRAREFTMKDAYSFHLSEECLDAT 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            + +H    +I++  G +   V   T       S      AE+    +  +  +     I
Sbjct: 174 YQAMHKAYCNIFERLGLDYRPVLADTGSIGGSLSHEFHVLAESGEDAIAFSDGSDYAANI 233

Query: 464 NTGVLLGE 471
                L  
Sbjct: 234 EKAEALAP 241



 Score = 77.5 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 25/166 (15%), Positives = 54/166 (32%), Gaps = 13/166 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           I R  + G I Q+         A  +N   +      +    +G  + R +   IE    
Sbjct: 407 IKRGIEVGHIFQLGTKYSEAMKAGVLNEGGKNQT---MTMGCYGIGVSRIVAAAIEQNND 463

Query: 545 NLPL-WL---SPIQAIVTTITSSAV----EYAQEIANLLKSHHLSIETDFRNETINYKIR 596
              + W    +P    +  +         + A  +   LK   L +  D R E       
Sbjct: 464 QYGIIWPQSIAPFDLAIVPMNMHKSHRIPDIANNLYQGLKDAGLDVLFDDRKERPGVMFN 523

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +  +  +P  ++ G++   E  + ++   +     + +  AI  + 
Sbjct: 524 DMELIGVPFTLVIGERNLDENKVELKNRRTGEKLMIDIDTAIDAIK 569


>gi|296804108|ref|XP_002842906.1| prolyl-tRNA synthetase [Arthroderma otae CBS 113480]
 gi|238845508|gb|EEQ35170.1| prolyl-tRNA synthetase [Arthroderma otae CBS 113480]
          Length = 600

 Score =  153 bits (385), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 85/419 (20%), Positives = 156/419 (37%), Gaps = 68/419 (16%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHL-WQQSGHWDSYRAN 317
            D SG        + I++ + S+    IK    +  + P  + + +  ++  H + + A 
Sbjct: 113 YDVSGCFVLKPHSFFIWEQIQSWFDANIKKMGVKNCSFPLFVSEDVLKKEKDHIEGFAAE 172

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           +  V  A ++  + +  A++P +       +   ++S+R+LP++L ++ SV R E     
Sbjct: 173 VAWVTHAGNSPLEKK-IAIRPTSETVMYPYYAKWIRSHRDLPLKLNQWNSVVRWEFKNP- 230

Query: 378 HGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
              +R R F   + H    TKE+   E L+I      +Y+      ++    T  EK  G
Sbjct: 231 QPFLRTREFLWQEGHTAHLTKEEAHEEVLQILQHYAHVYEQLLAVPVIQGQKTDKEKFAG 290

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
                                                 Y    E  +  A GR  Q GT 
Sbjct: 291 G------------------------------------LYTTTVEGYIP-ATGRGIQGGTS 313

Query: 497 Q-VDFNLPSRFNAFYVNSH---SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
             +  N    F     +      EK  P+ + +  +G   R IG+M+     N  L L P
Sbjct: 314 HGLGQNFSKMFGITVEDPSARPDEKKPPLHVWQNSWGLSTRTIGVMVMIHGDNRGLVLPP 373

Query: 553 ----IQAIVTTITSSA----VEYA------QEIANLLKSHHLSIETDFRNE-TINYKIRE 597
               IQ ++  +   A     E A      + IA +L +  + +E D R+  T  +K  +
Sbjct: 374 RVADIQTVIVPVGLGAKTPDEERASIMAEIEAIATVLSAAGVRVEVDKRDGYTPGWKFND 433

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRF---GSTTTQKVSLLD---AIPILTKESLPPDC 650
             +K IP+ +  G  E++   +   R    G      + + +   A+P L  E++  D 
Sbjct: 434 WELKGIPLRLEFGPGESAGSFVTTSRRDIAGKEGKSSIPIKELGTAVPALL-ETIQADL 491


>gi|293603409|ref|ZP_06685836.1| proline--tRNA ligase [Achromobacter piechaudii ATCC 43553]
 gi|292818182|gb|EFF77236.1| proline--tRNA ligase [Achromobacter piechaudii ATCC 43553]
          Length = 576

 Score =  153 bits (385), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 51/222 (22%), Positives = 89/222 (40%), Gaps = 11/222 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +   +        E+E   H+ + R   +  +A    G+  +   G KI + + + +R 
Sbjct: 3   ASNYHINTLKEAPSEAEVASHQLMTRAGMIRKLA---GGIYTYMPLGLKIIRKVEAIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LWQ+SG W+ Y A +  +K      +  R F L+P +    
Sbjct: 60  EMNASGAIELLMPVVQPAELWQESGRWEQYGAELLRIKD-----RHQRDFVLQPTSEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + + SYR+LP+      + +R+E      GLMR R FT  DA+ F   E    + 
Sbjct: 115 TDIARNEIHSYRQLPLNFYHIQTKFRDERRPRF-GLMRGREFTMKDAYSFDRDEAGALKS 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
              ++   + I+   G +   V   T       S      AE
Sbjct: 174 YDTMYAAYMRIFNRLGLQFRAVAADTGSIGGTRSHEFQVIAE 215



 Score = 77.5 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 22/154 (14%), Positives = 57/154 (37%), Gaps = 9/154 (5%)

Query: 497 QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN----LPLWLS 551
            V +       A       E   P ++    +G  + R +G  IE          P  ++
Sbjct: 416 HVFYLGKKYSEALKATFLDETGKPAVLEMGCYGIGVTRIVGAAIEQNHDARGIIWPRAIA 475

Query: 552 PIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIII 607
           P + ++  +    + +  + AQ++   L +  + +  D R+        E  +   P+ +
Sbjct: 476 PFEVVICPVGWGKSETVRDTAQKLYESLLARGVDVILDDRDARPGVMFAEWELIGAPLRV 535

Query: 608 ICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
             G++  ++  + ++    T   K+ +  A+  +
Sbjct: 536 TVGERGLNDGVVELQARRETEAAKIPVESALEAV 569


>gi|283835256|ref|ZP_06354997.1| proline--tRNA ligase [Citrobacter youngae ATCC 29220]
 gi|291068967|gb|EFE07076.1| proline--tRNA ligase [Citrobacter youngae ATCC 29220]
          Length = 572

 Score =  153 bits (385), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 52/250 (20%), Positives = 100/250 (40%), Gaps = 11/250 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGVRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E+  P V    LWQ+SG W+ Y   +  +    D     R F L P +    
Sbjct: 60  EMNNAGAIEVLMPVVQPSELWQESGRWEQYGPELLRIADRGD-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHTSQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   G +   V+  T       S      A++    V+ +  +     I
Sbjct: 174 YDAMYAAYSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVIFSDSSDYAANI 233

Query: 464 NTGVLLGEGA 473
                +   A
Sbjct: 234 EFAEAVAPKA 243



 Score = 84.8 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 56/167 (33%), Gaps = 13/167 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE---- 540
           I R  + G I Q+         A             ++    +G  + R +   IE    
Sbjct: 405 IKRGIEVGHIFQLGTKYSEAMKAAVQGEDG---RNQILTMGCYGIGVTRVVAAAIEQNYD 461

Query: 541 NFKGNLPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +     P  ++P Q  +  +         E A+++   L++  + +  D R E       
Sbjct: 462 DRGIVWPDAIAPFQVAILPMNMHKSYRVQELAEKLYAELRAQGIEVLMDDRKERPGVMFA 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  +  IP  I+ GD+      I  +   +   Q +   D +  L K
Sbjct: 522 DMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVDYLVK 568


>gi|241999440|ref|XP_002434363.1| glutamyl-tRNA synthetase, cytoplasmic, putative [Ixodes scapularis]
 gi|215497693|gb|EEC07187.1| glutamyl-tRNA synthetase, cytoplasmic, putative [Ixodes scapularis]
          Length = 1502

 Score =  153 bits (385), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 63/438 (14%), Positives = 153/438 (34%), Gaps = 63/438 (14%)

Query: 226  NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
              +          EE+    + ++  + ++     D SG        + I++ +  ++  
Sbjct: 996  PKKITRLGLEAKKEENLPDWYSQVITKAEMIEY-YDVSGCYILRPWAYSIWENIKEFLDT 1054

Query: 286  KIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPG 343
            +I+    +    P  +     + +  H   +   +  V  + ++       A++P +   
Sbjct: 1055 RIRKIGVQNCYFPMFVSAQALEREKTHVADFAPEVAWVTRSGNSDL-AEPIAIRPTSETV 1113

Query: 344  HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFN 402
                +   ++S+R+LP++L ++ ++ R E        +R R F   + H  F T+E+   
Sbjct: 1114 MYPSYAKWVQSHRDLPLQLNQWCNIVRWEFK-HPQPFLRTREFLWQEGHTAFATREEAVE 1172

Query: 403  ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
            E  KI ++  ++Y++     ++    T  EK  G+D                        
Sbjct: 1173 EVYKILDIYTAVYEELLALPVVRGRKTEKEKFAGAD------------------------ 1208

Query: 463  INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPV 521
                        +    E  +  A GR  Q  T   +  N    F   + +  + +    
Sbjct: 1209 ------------FTTTVEAYVP-ASGRGIQGATSHHLGQNFSKMFEIVFEDPETREKKFA 1255

Query: 522  MIHRAVFGSIERFIGIMIENFKGNLPLWLSPI----QAIVTT------ITSSA----VEY 567
               +  +G   R IG+++     N  L L P     Q ++        ++       +++
Sbjct: 1256 F--QNSWGLTTRTIGVVVMVHADNQGLVLPPRVACYQVVIVPCGITAAMSEDQKAALIKF 1313

Query: 568  AQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERS-IGIRRFG 625
             Q+    L +  +  + D+R+  +  +K     +K +PI +  G ++  +   + +R   
Sbjct: 1314 CQDFEATLDAAGVRCKGDYRDNYSPGWKFNHWELKGVPIRVEIGPRDMQQEQFVAVR-RD 1372

Query: 626  STTTQKVSLLDAIPILTK 643
            +          A+  +  
Sbjct: 1373 TGEKLTYKTSTAVKEMKD 1390


>gi|301155393|emb|CBW14859.1| prolyl-tRNA synthetase [Haemophilus parainfluenzae T3T1]
          Length = 571

 Score =  153 bits (385), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 64/329 (19%), Positives = 115/329 (34%), Gaps = 17/329 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q   +       E+    H+ + R   +  +A   SG+  W   GW++ + +   +R 
Sbjct: 3   TSQYLFSTLKETPAEAAIVSHQLMLRAGMIRPLA---SGLYNWMPTGWRVLRKVEKIIRE 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      EI  P V    LW++SG W+ Y   +   +   +     R F L P +    
Sbjct: 60  EMDKSGALEIKMPVVQPAELWEESGRWEQYGPELLRFEDRGN-----RHFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SYR+LP+ L +  + +R+E      G+MR R F   DA+ F        + 
Sbjct: 115 TDLVRREVSSYRQLPINLYQIQTKFRDEVRPRF-GVMRSREFIMKDAYSFHADHASLQQT 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++    +I+   G +   V+  T       S      A +    V+ + ++     I
Sbjct: 174 YDVMYQTYSNIFNRLGLDFRAVQADTGSIGGSASHEFQVLANSGEDDVIFSTESDYAANI 233

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
                +  G    P     L D          +   FNLP       +          ++
Sbjct: 234 ELAEAVAIGERAAPTKAMELVDT-PNAKTIAELVEQFNLPIEKTVKTLIVKGASEEQPLV 292

Query: 524 HRAVFGSIERFIGIMIENFKGNLPLWLSP 552
              + G  E     + E     LP   SP
Sbjct: 293 ALVIRGDHE-----LNEIKAEKLPEVASP 316



 Score = 92.5 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 63/167 (37%), Gaps = 14/167 (8%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           I R  + G I Q+        NA           P+++    +G  + R +   IE +F 
Sbjct: 403 IKRGIEVGHIFQLGKKYSEAMNATVQGEDG---RPMVVTMGCYGIGVTRVVAAAIEQHFD 459

Query: 544 GNLPLWL----SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
               +W     +P    V  +    + S  EYA+E+   L++  + +  D R E      
Sbjct: 460 ERGIVWPTDEIAPFTVAVVPMNMHKSESVQEYAEELYRTLQAQGVEVIFDDRKERPGVMF 519

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +  +  +P +++ G+K  +   I  +   +   Q ++    +  L 
Sbjct: 520 ADMELIGVPHMVVIGEKNLANGEIEYKNRRTGEKQMIAKDQLLDFLK 566


>gi|114319700|ref|YP_741383.1| prolyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
 gi|122312397|sp|Q0AB94|SYP_ALHEH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|114226094|gb|ABI55893.1| prolyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
          Length = 568

 Score =  153 bits (385), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 46/231 (19%), Positives = 87/231 (37%), Gaps = 11/231 (4%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ + R   +  +A    G+  W   G ++ + +   +R ++      E+  P 
Sbjct: 17  DAEIVSHQLMLRAGMIRKLAA---GLYTWTPLGLRVLRKVEQIVREEMDRAGAHELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    LWQ+S  WD Y   +  +K      +  R F   P +           +KSYR+L
Sbjct: 74  VQPAELWQESTRWDKYGPELLRLKD-----RHERDFCFGPTHEEVITDYVRREVKSYRQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKD 417
           P+ L +  + +R+E      G+MR R F   DA+ F   +       + ++     I++ 
Sbjct: 129 PLNLYQIQTKFRDEIRPRF-GVMRAREFLMKDAYSFHLDDDCLARTYQVMYETYTRIFER 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
            G     V   +       S      AE+    V  + ++     +     
Sbjct: 188 TGLVFRAVAADSGNIGGSVSHEFHVLAESGEDAVAFSDESDYAANVELAEA 238



 Score = 95.6 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 60/163 (36%), Gaps = 9/163 (5%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I Q+      +  A  +N   +    V +     G        + +N   N  
Sbjct: 404 RGIEVGHIFQLGREYSEKMKATVLNEAGDAQT-VTMGCYGIGVSRVVAAAIEQNHDDNGI 462

Query: 548 LWLSPI---QAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +W +PI   Q  +  I    + +  E A+++   L++  + +  D R+     K  +  +
Sbjct: 463 IWPAPIAPFQLALVPIGMNRSEAVTEQAEKLYAELQAEGVEVFFDDRDARPGVKFADMEL 522

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             IP  ++ GD+      +  R    + +  V L +    L +
Sbjct: 523 IGIPHRLVIGDRGLKNGVVEYRGRRDSESTDVPLAELSAFLRE 565


>gi|229845777|ref|ZP_04465889.1| prolyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
 gi|229810781|gb|EEP46498.1| prolyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
          Length = 572

 Score =  153 bits (385), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 62/329 (18%), Positives = 119/329 (36%), Gaps = 17/329 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q   +       +++   H+ + R   +  +A   SG+  W   G ++ + +   +R 
Sbjct: 3   TSQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMA---SGLYNWLPTGIRVLKKVEKVVRE 59

Query: 286 KIKDD-YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LW++SG WD Y   +   +   +     R F L P +    
Sbjct: 60  EMNKGGAIEVLMPVVQPAELWEESGRWDQYGPELLRFEDRGN-----RNFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP+ L +  + +R+E      G+MR R F   DA+ F T ++     
Sbjct: 115 TDLVRREVSSYKQLPLNLYQIQTKFRDEVRPRF-GVMRSREFIMKDAYSFHTTQESLQAT 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++ +  +I+   G +   V+  T       S      A +    V+ + ++     I
Sbjct: 174 YDVMYQVYSNIFNRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVFSTESDFAANI 233

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
                +  G    P  E  L D          +   FNLP       +       +  ++
Sbjct: 234 ELAEAIAIGERQAPTAEMCLVDT-PNAKTIAELVEQFNLPIEKTVKTLIVKGADENQPLV 292

Query: 524 HRAVFGSIERFIGIMIENFKGNLPLWLSP 552
              + G  E     + E      PL   P
Sbjct: 293 ALIIRGDHE-----LNEIKAQKHPLVADP 316



 Score = 91.0 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 63/168 (37%), Gaps = 14/168 (8%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           I R  + G I Q+         A       +   P+++    +G  + R +   IE +  
Sbjct: 403 IKRGIEVGHIFQLGKKYSEAVKATVQGEDGK---PLVMTMGCYGIGVTRVVASAIEQHHD 459

Query: 544 GNLPLWL----SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
               +W     +P    +  +    + +  +YA+E+   L+S  + +  D R E      
Sbjct: 460 DRGIIWPSDEIAPFTVAIVPMNMHKSEAVQKYAEELYRTLQSQGVDVIFDDRKERPGVMF 519

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +  +  IP +++ G+K      I  +   +   + +S    + +L +
Sbjct: 520 ADMELIGIPHMVVIGEKNLDNGEIEYKNRRTGEKEMISKDKLLSVLNE 567


>gi|42560874|ref|NP_975325.1| prolyl-tRNA synthetase [Mycoplasma mycoides subsp. mycoides SC str.
           PG1]
 gi|81829401|sp|Q6MTR9|SYP_MYCMS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|42492371|emb|CAE76967.1| proline-tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str.
           PG1]
          Length = 474

 Score =  153 bits (385), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 70/376 (18%), Positives = 138/376 (36%), Gaps = 54/376 (14%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAV 321
           G + +   G++I++ +  Y+  + K  + + +  P ++ + L+ ++  H + +   +  V
Sbjct: 36  GTMIFRPYGYRIWELIQKYLDEEFKKVNVDNVYFPLLIPESLFNKEKDHIEGFSPEIATV 95

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
                  K      ++P +    +  F++ + SYR+LP+   ++ +V R E   +    +
Sbjct: 96  TRVGQK-KLEENLFIRPTSEVVMMDYFSNEINSYRDLPLIYNQWCNVMRWEK--TTRPFL 152

Query: 382 RVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           R   F   + H   +   +  N CLKI N+     K+     ++    T  EK  G    
Sbjct: 153 RTSEFLWQEGHTIHSSYNEAENFCLKILNIYEKFAKEILLLPVICGKKTEKEKFAG---- 208

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDF 500
                                           A      E ++ D  G+  QCGT     
Sbjct: 209 --------------------------------AKDTYTIESLMFD--GQALQCGTSHFFA 234

Query: 501 NLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP------IQ 554
           +  ++   + +   +++      +   +G   R IG +I     +  L L        IQ
Sbjct: 235 DNFTK--VYDIKFQNKENKLEHAYSTSWGVSTRLIGALIMTHSDDNGLVLPSKISPIQIQ 292

Query: 555 AIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
            I    T    +  + I + L      I+ D  +++  +KI E  IK IPI I  G ++ 
Sbjct: 293 IIQIKNTEQIDQVVENIKDKLSD--YRIDVDNSDKSFGFKISEAEIKGIPIRIEIGPRDL 350

Query: 615 SERSIGIRRFGSTTTQ 630
               I I R      +
Sbjct: 351 ENNQITISRRDQQENK 366


>gi|32035109|ref|ZP_00135161.1| COG0442: Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|126209292|ref|YP_001054517.1| prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae L20]
 gi|166980093|sp|A3N3C6|SYP_ACTP2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|126098084|gb|ABN74912.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 5b
           str. L20]
          Length = 571

 Score =  153 bits (385), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 64/329 (19%), Positives = 117/329 (35%), Gaps = 17/329 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q   +       +++   H+ + R   +  +A   SG+  W   G K+ + + + +R 
Sbjct: 3   TSQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMA---SGLYNWLPTGIKVLKKVENIIRE 59

Query: 286 KIKDD-YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LWQ+SG W+ Y A +             R F L P +    
Sbjct: 60  EMNKGGAIEVLMPVVQPAELWQESGRWNDYGAELLRFVDRGS-----RDFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP+ L +  + +R+E      G+MR R F   DA+ F   +    E 
Sbjct: 115 TDLVRREVSSYKQLPLNLYQIQTKFRDEVRPRF-GVMRSREFVMKDAYSFHVDKASLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++ +  +I+   G +   V+  T       S      A +    V+ + ++     I
Sbjct: 174 YDVMYQVYSNIFTRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVFSTESDFAANI 233

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
                +  G    P  E  L D          +   FNLP       +          ++
Sbjct: 234 ELAEAVAVGERQAPTAEMQLVDT-PNAKTINELVEQFNLPIGKTVKTLIVKGATEEQPLV 292

Query: 524 HRAVFGSIERFIGIMIENFKGNLPLWLSP 552
              + G  E     + E      PL   P
Sbjct: 293 ALVLRGDHE-----LNEIKAQKHPLVADP 316



 Score = 92.2 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 63/168 (37%), Gaps = 14/168 (8%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           I R  + G I Q+         A       +   P+++    +G  + R +   IE +  
Sbjct: 403 IKRGIEVGHIFQLGTKYSEAMKATVQGEDGK---PLVMTMGCYGIGVTRVVAAAIEQHHD 459

Query: 544 GNLPLWL----SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
               +W     +P    +  +    + S  ++++E+   LK+  + +  D R E      
Sbjct: 460 ERGIIWPSDEIAPFTVAIVPMNMHKSESVQQFSEELYRTLKAQGVDVIFDDRKERPGVMF 519

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +  +  +P +++ G+K  +   I  +   +   Q ++    +  L +
Sbjct: 520 ADMELIGVPHMVVIGEKNLANGEIEYKNRRTGEKQMIAKDQLLAFLKE 567


>gi|331703337|ref|YP_004400024.1| Proline tRNA ligase [Mycoplasma mycoides subsp. capri LC str.
           95010]
 gi|328801892|emb|CBW54045.1| Proline tRNA ligase [Mycoplasma mycoides subsp. capri LC str.
           95010]
          Length = 474

 Score =  153 bits (385), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 66/374 (17%), Positives = 139/374 (37%), Gaps = 50/374 (13%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAV 321
           G + +   G++I++ +  Y+  + K  + + +  P ++ + L+ ++  H + +   +  V
Sbjct: 36  GTMIFRPYGYRIWELIQKYLDEEFKKINVDNVYFPLLIPESLFNKEKDHIEGFSPEIATV 95

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
               +   +   F ++P +    +  F++ + SYR+LP+   ++ +V R E   +    +
Sbjct: 96  TKVGEKQLEENLF-IRPTSEVVMMDYFSNEINSYRDLPLIYNQWCNVMRWEK--TTRPFL 152

Query: 382 RVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           R   F   + H   +   +  + CLKI N+     K+     ++    T  EK  G    
Sbjct: 153 RTSEFLWQEGHTVHSSYNEAEDFCLKILNIYEKFAKEILLLPVICGKKTEKEKFAG---- 208

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDF 500
                                           A      E ++ D  G+  QCGT     
Sbjct: 209 --------------------------------AKDTYTIESLMFD--GQALQCGTSHFFA 234

Query: 501 NLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI--QAIVT 558
           +  ++   + +   +++      +   +G   R IG +I     +  L L        + 
Sbjct: 235 DNFTK--VYDIKFQNKENKLEHAYSTSWGVSTRLIGALIMTHSDDNGLVLPSKISPIQIQ 292

Query: 559 TITSSAVEYAQEIANLLKSH--HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASE 616
            I     E   ++  ++K       I+ D  +++  +KI E  IK IPI I  G ++   
Sbjct: 293 IIQIKNTEQIDQVVEIIKDKLSDYRIDVDNSDKSFGFKISEAEIKGIPIRIEIGPRDLEN 352

Query: 617 RSIGIRRFGSTTTQ 630
             I I R      +
Sbjct: 353 NQITISRRDQQENK 366


>gi|212535538|ref|XP_002147925.1| prolyl-tRNA synthetase [Penicillium marneffei ATCC 18224]
 gi|210070324|gb|EEA24414.1| prolyl-tRNA synthetase [Penicillium marneffei ATCC 18224]
          Length = 594

 Score =  153 bits (385), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 80/388 (20%), Positives = 144/388 (37%), Gaps = 61/388 (15%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRAN 317
            D SG        + +++T+ ++   KIK       + P  + + + Q +  H + + A 
Sbjct: 107 YDVSGCFILKPSSYFVWETIQNWFNDKIKKMGVRNCSFPLFVSEDVLQREKDHIEGFAAE 166

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           +  V  A  T  + R  A++P +       +   ++S+R+LP++L ++ SV R E     
Sbjct: 167 VAWVTHAGSTPLE-RKIAIRPTSETVMYPYYAKWIRSHRDLPLKLNQWNSVVRWEFKHP- 224

Query: 378 HGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
              +R R F   + H    T+E    E ++I +    +Y+D     ++    T  EK  G
Sbjct: 225 QPFLRTREFLWQEGHTAHLTEEGAAEEVMQILDHYAHVYEDLLAVPVVRGKKTEKEKFAG 284

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
                                                +Y    E  +  A GR  Q GT 
Sbjct: 285 G------------------------------------YYTTTVEGYIP-ATGRGIQGGTS 307

Query: 497 Q-VDFNLPSRFNAFYVNSH---SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
             +  N    F     + +    EK   + + +  +G   R IG+M+     N  L L P
Sbjct: 308 HCLGQNFSKMFGITVEDPNAKPDEKGASLHVWQNSWGLSTRTIGVMVMIHSDNKGLVLPP 367

Query: 553 ----IQAIVTTIT--------SSAVEY--AQEIANLLKSHHLSIETDFRNE-TINYKIRE 597
               IQ I+  +           A  Y    E+A+ L +  +  ETD R+  +  YK  +
Sbjct: 368 RVAEIQTIIVPVGITKSTTDEERAQIYNDCAELASKLSAVGVRAETDLRDGYSPGYKFND 427

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFG 625
             ++ +P+ +  G  EA    +   R  
Sbjct: 428 WELRGVPLRLEFGPGEAKGGFVTAARRD 455


>gi|68249330|ref|YP_248442.1| prolyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
 gi|229844600|ref|ZP_04464739.1| prolyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
 gi|81336245|sp|Q4QMG5|SYP_HAEI8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|68057529|gb|AAX87782.1| prolyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
 gi|229812314|gb|EEP48004.1| prolyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
          Length = 572

 Score =  153 bits (385), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 62/329 (18%), Positives = 120/329 (36%), Gaps = 17/329 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q   +       +++   H+ + R   +  +A   SG+  W   G ++ + +   +R 
Sbjct: 3   TSQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMA---SGLYNWLPTGIRVLKKVEKVVRE 59

Query: 286 KIKDD-YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LW++SG WD Y   +   +   +     R F L P +    
Sbjct: 60  EMNKGGAIEVLMPVVQPAELWEESGRWDQYGPELLRFEDRGN-----RNFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP+ L +  + +R+E      G+MR R F   DA+ F T ++     
Sbjct: 115 TDLVRREVSSYKQLPLNLYQIQTKFRDEVRPRF-GVMRSREFIMKDAYSFHTTQESLQAT 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++ +  +I++  G +   V+  T       S      A +    V+ + ++     I
Sbjct: 174 YDVMYQVYSNIFRRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVFSTESDFAANI 233

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
                +  G    P  E  L D          +   FNLP       +       +  ++
Sbjct: 234 ELAEAIAIGERQAPTAEMCLVDT-PNAKTIAELVEQFNLPIEKTVKTLIVKGADENQPLV 292

Query: 524 HRAVFGSIERFIGIMIENFKGNLPLWLSP 552
              + G  E     + E      PL   P
Sbjct: 293 ALIIRGDHE-----LNEIKAQKHPLVADP 316



 Score = 92.2 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 63/168 (37%), Gaps = 14/168 (8%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           I R  + G I Q+         A       +   P+++    +G  + R +   IE +  
Sbjct: 403 IKRGIEVGHIFQLGKKYSEAMKATVQGEDGK---PLVMTMGCYGIGVTRVVASAIEQHHD 459

Query: 544 GNLPLWL----SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
               +W     +P    +  +    + +  +YA+E+   L+S  + +  D R E      
Sbjct: 460 DRGIIWPSDEIAPFTVAIVPMNMHKSEAVQKYAEELYRTLQSQGVDVIFDDRKERPGVMF 519

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +  +  IP +++ G+K      I  +   +   + +S    + +L +
Sbjct: 520 ADMELIGIPHMVVIGEKNLDNGEIEYKNRRTGEKEMISKDKLLSVLNE 567


>gi|302505226|ref|XP_003014834.1| hypothetical protein ARB_07395 [Arthroderma benhamiae CBS 112371]
 gi|291178140|gb|EFE33931.1| hypothetical protein ARB_07395 [Arthroderma benhamiae CBS 112371]
          Length = 624

 Score =  153 bits (385), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 87/419 (20%), Positives = 160/419 (38%), Gaps = 68/419 (16%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHL-WQQSGHWDSYRAN 317
            D SG        + I++ + S+   KIK  + +  + P  + + +  ++  H + + A 
Sbjct: 116 YDVSGCFVLKPHSFFIWEQIQSWFDAKIKQMNVKNCSFPLFVSEDVLKKEKDHIEGFAAE 175

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           +  V  A ++  + +  A++P +       +   ++S+R+LP++L ++ SV R E     
Sbjct: 176 VAWVTHAGNSPLEKK-IAIRPTSETVMYPYYAKWIRSHRDLPLKLNQWNSVVRWEFKNP- 233

Query: 378 HGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
              +R R F   + H    T+E+   E L+I      +Y++     ++    T  EK  G
Sbjct: 234 QPFLRTREFLWQEGHTAHLTREEAHTEVLQILQHYAHVYEELLAVPVIQGQKTDKEKFAG 293

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
                                                 Y    E  +  A GR  Q GT 
Sbjct: 294 G------------------------------------LYTTTVEGYIP-ATGRGIQGGTS 316

Query: 497 Q-VDFNLPSRFNAFYVNSH---SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
             +  N    F     +      EK  P+ + +  +G   R IG+M+     N  L L P
Sbjct: 317 HGLGQNFSKMFGITVEDPSARPDEKKPPLHVWQNSWGLSTRTIGVMVMIHGDNRGLVLPP 376

Query: 553 ----IQAIVTTITSSA----VEYA------QEIANLLKSHHLSIETDFRNE-TINYKIRE 597
               IQ ++  +   A     E A      + IA +L +  + +E D R+  T  +K  +
Sbjct: 377 RVADIQTVIVPVGLGAKTPDEERAAIMAEIEAIATVLSAAGVRVEVDRRDGYTPGWKFND 436

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRF------GSTTTQKVSLLDAIPILTKESLPPDC 650
             +K IP+ +  G  E++   +   R       G ++ Q   L  A+P L  E++  D 
Sbjct: 437 WELKGIPLRLEFGPGESAGSFVTTSRRDIAGKEGKSSIQIKDLGTAVPALL-ETIQADL 494


>gi|303232046|ref|ZP_07318749.1| proline--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
 gi|302513152|gb|EFL55191.1| proline--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
          Length = 572

 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 45/228 (19%), Positives = 92/228 (40%), Gaps = 10/228 (4%)

Query: 243 KRDHRKLAREMDLF--HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQV 299
             D   +++++ L    + +  +G+  +   GW+  + + + +R ++     +EI  P +
Sbjct: 15  PSDADVVSQQLMLRAGFMRKVANGLYSFLPLGWRSIKKIEAIIREEMDRSGAQEIMMPIL 74

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               +W++SG W++Y A M  +    D       + L P +      +  + + SYR+LP
Sbjct: 75  QPAEIWKESGRWNAYGAEMMRINDRHDV-----EYCLGPTHEEMITTLVKNEINSYRQLP 129

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDF 418
           V L +  S +R+E     +GLMR R F   D + F   +   +   K +++    I+   
Sbjct: 130 VNLYQIQSKFRDERRPR-YGLMRSREFIMKDGYSFDIDDAAADVSYKNMYDAYSRIFTRC 188

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           G     V+  +       +      AE     ++          I  G
Sbjct: 189 GLTFRPVEADSGAIGGSNTHEFMAIAEAGEADIIHCSACDYAANIEIG 236



 Score = 70.2 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 19/154 (12%), Positives = 52/154 (33%), Gaps = 11/154 (7%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN----LPLWLSP 552
           +         A Y++ +     P  +    +G  + R +   IE +        P  ++P
Sbjct: 417 LGTKYSESLQATYLDQNG---RPNAMVMGCYGIGVSRTLAAAIEQYHDENGIVWPRAIAP 473

Query: 553 IQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIIC 609
            + ++  I     + +  +  I + L ++ + +  D R +    K ++  +   P+ I  
Sbjct: 474 FEVVIVPINAKDEALMSTSTSIYDTLLNNKVDVLLDDRKDRAGVKFKDADLIGYPLRITV 533

Query: 610 GDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
                    + IR   +       + +    + +
Sbjct: 534 SKNTLESNEVEIRVRKTGEAINCPIDEVSSKVQE 567


>gi|15603235|ref|NP_246309.1| prolyl-tRNA synthetase [Pasteurella multocida subsp. multocida str.
           Pm70]
 gi|81856712|sp|Q9CL72|SYP_PASMU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|12721741|gb|AAK03454.1| ProS [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 571

 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 60/331 (18%), Positives = 116/331 (35%), Gaps = 16/331 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q   +       E+    H+ + R   +  +A   SG+  W   G ++   +   +R 
Sbjct: 3   TSQYLFSTLKETPAEASIVSHQLMLRAGMIRPLA---SGLYTWLPTGLRVLNKVEKIIRE 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+         LWQ+SG W+ Y   +   K   +     R F + P N    
Sbjct: 60  EMDKSGALEVKMAVTQPAELWQESGRWEEYGPELLRFKDRGE-----RDFVIGPTNEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    L SY++LP+ L    + +R+E      G+MR R F   DA+ F T  +   + 
Sbjct: 115 TDLVRRELSSYKQLPLNLYHIQTKFRDEVRPRF-GVMRSREFVMKDAYSFHTTHECLQKT 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++    +I+   G +   V+  T       S      A++    V+ + ++     I
Sbjct: 174 YDVMYETYSNIFNRLGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFSTESDFAANI 233

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
                +  G       E  + D          ++       +     V   +E+    ++
Sbjct: 234 ELAEAVALGERGAATEELRVVDTPNAKTIAELVEQFNQPIEKTVKTLVVHATEESGHKLV 293

Query: 524 HRAVFGSIERFIGIMIENFKGNLPLWLSPIQ 554
              V G  E     + E     + +  SP+Q
Sbjct: 294 ALLVRGDHE-----LNEIKAEKVDIVASPLQ 319



 Score = 89.5 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 29/166 (17%), Positives = 62/166 (37%), Gaps = 13/166 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           I R  + G I Q+     +  NA           P  +    +G  + R I   IE +  
Sbjct: 404 IKRGIEVGHIFQLGTKYSAAMNATVQGEDG---RPQTMIMGCYGIGVTRVIAAAIEQHHD 460

Query: 544 GNLPLWL---SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
               +W    +P +  +  +    + S  ++A+E+   L +  + +  D R E       
Sbjct: 461 ERGIIWPDNIAPFKVAIVPMNMHKSESVQQFAEELYRTLTAQGVEVIFDDRKERPGVMFA 520

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +  +  +P +I+ G+K   +  I  +   S   + ++    + +L 
Sbjct: 521 DMELIGVPHMIVIGEKNLEKGEIEYKYRRSGEKEMIAKDQLLDVLK 566


>gi|16272670|ref|NP_438888.1| prolyl-tRNA synthetase [Haemophilus influenzae Rd KW20]
 gi|260579822|ref|ZP_05847652.1| prolyl-tRNA synthetase [Haemophilus influenzae RdAW]
 gi|1174537|sp|P43830|SYP_HAEIN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|1573733|gb|AAC22388.1| prolyl-tRNA synthetase (proS) [Haemophilus influenzae Rd KW20]
 gi|260093106|gb|EEW77039.1| prolyl-tRNA synthetase [Haemophilus influenzae RdAW]
          Length = 572

 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 62/329 (18%), Positives = 119/329 (36%), Gaps = 17/329 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q   +       +++   H+ + R   +  +A   SG+  W   G ++ + +   +R 
Sbjct: 3   TSQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMA---SGLYNWLPTGIRVLKKVEKVVRE 59

Query: 286 KIKDD-YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LW++SG WD Y   +   +   +     R F L P +    
Sbjct: 60  EMNKGGAIEVLMPVVQPAELWEESGRWDQYGPELLRFEDRGN-----RNFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP+ L +  + +R+E      G+MR R F   DA+ F T ++     
Sbjct: 115 TDLVRREVSSYKQLPLNLYQIQTKFRDEVRPRF-GVMRSREFIMKDAYSFHTTQESLQAT 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++ +  +I+   G +   V+  T       S      A +    V+ + ++     I
Sbjct: 174 YDVMYQVYSNIFNRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVFSTESDFAANI 233

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
                +  G    P  E  L D          +   FNLP       +       +  ++
Sbjct: 234 ELAEAIAIGERQAPTAEMCLVDT-PNAKTIAELVEQFNLPIEKTVKTLIVKGADENQPLV 292

Query: 524 HRAVFGSIERFIGIMIENFKGNLPLWLSP 552
              + G  E     + E      PL   P
Sbjct: 293 ALIIRGDHE-----LNEIKAQKHPLVADP 316



 Score = 92.2 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 27/168 (16%), Positives = 63/168 (37%), Gaps = 14/168 (8%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           I R  + G I Q+         A       +   P+++    +G  + R +   IE +  
Sbjct: 403 IKRGIEVGHIFQLGKKYSEAMKATVQGEDGK---PLVMTMGCYGIGVTRVVASAIEQHHD 459

Query: 544 GNLPLWL----SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
               +W     +P    +  +    + +  +YA+E+   L+S  + +  D R E      
Sbjct: 460 ERGIIWPSDEIAPFTVAIVPMNMHKSEAVQKYAEELYRTLQSQGVDVIFDDRKERPGVMF 519

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +  +  +P +++ G+K      I  +   +   + +S    + +L +
Sbjct: 520 ADMELIGVPHMVVIGEKNLDNGEIEYKNRRTGEKEMISKDKLLSVLNE 567


>gi|148826625|ref|YP_001291378.1| prolyl-tRNA synthetase [Haemophilus influenzae PittEE]
 gi|166980127|sp|A5UDZ4|SYP_HAEIE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|148716785|gb|ABQ98995.1| prolyl-tRNA synthetase [Haemophilus influenzae PittEE]
          Length = 572

 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 62/329 (18%), Positives = 120/329 (36%), Gaps = 17/329 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q   +       +++   H+ + R   +  +A   SG+  W   G ++ + +   +R 
Sbjct: 3   TSQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMA---SGLYNWLPTGIRVLKKVEKIIRE 59

Query: 286 KIKDD-YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LW++SG W+ Y   +   +   +     R F L P +    
Sbjct: 60  EMNKGGAIEVLMPVVQPAELWEESGRWEQYGPELLRFEDRGN-----RNFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP+ L +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLIRREVSSYKQLPLNLYQIQTKFRDEVRPRF-GVMRSREFIMKDAYSFHTTQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++ +  +I+   G +   V+  T       S      A +    V+ + ++     I
Sbjct: 174 YDVMYQVYSNIFNRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVFSTESDFAANI 233

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
                +  G    P  E  L D          +   FNLP       +       +  ++
Sbjct: 234 ELAEAVAIGERQAPTAEMTLVDT-PNAKTINELVEQFNLPIEKTVKTLIVKGADENQPLV 292

Query: 524 HRAVFGSIERFIGIMIENFKGNLPLWLSP 552
              + G  E     + E      PL   P
Sbjct: 293 ALIIRGDHE-----LNEIKAQKHPLVADP 316



 Score = 92.5 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 63/168 (37%), Gaps = 14/168 (8%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           I R  + G I Q+         A       +   P+++    +G  + R +   IE +  
Sbjct: 403 IKRGIEVGHIFQLGKKYSEAMKATVQGEDGK---PLVMTMGCYGIGVTRVVASAIEQHHD 459

Query: 544 GNLPLWL----SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
               +W     +P    +  +    + S  +YA+E+   L+S  + +  D R E      
Sbjct: 460 DRGIIWPSDEIAPFTVAIVPMNMHKSESVQKYAEELYRTLQSQGVDVIFDDRKERPGVMF 519

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +  +  +P +++ G+K      I  +   S   + +S    + +L +
Sbjct: 520 ADMELIGVPHMVVIGEKNLDNGEIEYKNRRSGEKEMISKDKLLSVLNE 567


>gi|315126673|ref|YP_004068676.1| prolyl-tRNA synthetase [Pseudoalteromonas sp. SM9913]
 gi|315015187|gb|ADT68525.1| prolyl-tRNA synthetase [Pseudoalteromonas sp. SM9913]
          Length = 574

 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 51/248 (20%), Positives = 95/248 (38%), Gaps = 11/248 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L        ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYILATLKETPSDAEIVSHQLMLRAGMIRRVA---SGLYTWLPSGLRVLRKVENIVRE 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P +    LW++SG W  +   +        T +  R FA+ P +    
Sbjct: 60  EMDKAGAIEMLMPVIQPADLWEESGRWSEFGPELMRF-----TDRHNREFAMGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNE 403
                  + SY++LP+ L +  +  R+E      G+MR R FT  DA+ F  T E +   
Sbjct: 115 TDFVRKEINSYKQLPITLYQVQTKVRDERRPRF-GVMRAREFTMKDAYSFHLTDECLDAT 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +H    +I++  G +   V   T       S      AE+    +  +  +     I
Sbjct: 174 YQVMHKAYCNIFERLGLDFRPVIADTGSIGGSVSHEFHVLAESGEDAIAFSDASDYAANI 233

Query: 464 NTGVLLGE 471
                L  
Sbjct: 234 EKAEALAP 241



 Score = 80.2 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 24/168 (14%), Positives = 56/168 (33%), Gaps = 13/168 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIEN--- 541
           I R  + G I Q+         A  ++   +      +    +G  + R +   IE    
Sbjct: 407 IKRGIEVGHIFQLGTKYSEAMKAGVLSESGKNQT---MTMGCYGIGVSRVVAAAIEQNND 463

Query: 542 -FKGNLPLWLSPIQAIVTTITSSAV----EYAQEIANLLKSHHLSIETDFRNETINYKIR 596
            +    P  ++P    +  +         + A  +   LK   L +  D R E       
Sbjct: 464 QYGITWPKAIAPFDLAIVPMNMHKSHRIPDIANNLYQGLKDAGLDVLFDDRKERPGVMFN 523

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  +  +P  ++ G++   E  + ++   +     + +  AI  +  +
Sbjct: 524 DMELLGVPYTLVIGERNLDENKVELKNRRTGEKLMIDIDSAIETIKNQ 571


>gi|315645695|ref|ZP_07898819.1| prolyl-tRNA synthetase [Paenibacillus vortex V453]
 gi|315279173|gb|EFU42483.1| prolyl-tRNA synthetase [Paenibacillus vortex V453]
          Length = 576

 Score =  152 bits (384), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 58/260 (22%), Positives = 105/260 (40%), Gaps = 15/260 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  +T       E+E   H+ + R   +   A    G+  +   GW++ + +   +R++
Sbjct: 4   SQLLMTTMRDMPSEAEALSHQWMLRGGYIRQTAA---GIYSYLPLGWRVLRKIEGIIRQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E+  P V    LW++SG +D Y   +  +    D     R F L P +     
Sbjct: 61  MDAAGAQEMLMPAVQPAELWKESGRYDVYGPELIRLHDRHD-----REFVLGPTHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
           ++    + SYR+LPV L +  S YR+E      GL+R R F   DA+ F    E +    
Sbjct: 116 SIVRQEISSYRKLPVNLYQIQSKYRDERRPRF-GLLRGREFLMKDAYSFDRDWEGLDVSY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD----ALWDDAENIMKGVLDTIKNSSQ 460
             ++     I++  G     V+         G      AL D  E+ +    D    ++ 
Sbjct: 175 RSMYEAYERIFERCGLTFRAVEADAGAIGGQGETHEFMALADIGEDTVVSCRDCRYAANL 234

Query: 461 DRINTGVLLGEGAFYGPKFE 480
           +R  + V   +G+    K +
Sbjct: 235 ERAESVVPARQGSVDSVKVD 254



 Score = 68.3 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 28/167 (16%), Positives = 55/167 (32%), Gaps = 10/167 (5%)

Query: 487 IGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
             R  + G +  +        N  Y++S   +  P+++     G       I  +   G 
Sbjct: 407 FHRGIELGHVFKLGTKYSEVMNGMYLDSDG-REKPLIMGCYGIGVSRVMAAIAEQRISGE 465

Query: 546 LPLWL---SPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
             +W    +P Q  V  +     + +  A+ I   L    L    D R+E    K ++  
Sbjct: 466 RLVWPMSVAPFQVHVIPVAVKDEAQMNLAEHIYKELIKAGLEPLLDDRDERAGVKFKDAE 525

Query: 600 IK-KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
            +   P  +I G + A+   +   R        +    AI    + +
Sbjct: 526 SRHGAPQRLIIG-RGAASGEVEWDRVEDGVKVNLPAAAAIQRACEAA 571


>gi|291299687|ref|YP_003510965.1| prolyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728]
 gi|290568907|gb|ADD41872.1| prolyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728]
          Length = 468

 Score =  152 bits (384), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 70/381 (18%), Positives = 145/381 (38%), Gaps = 54/381 (14%)

Query: 270 RKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH-LWQQSGHWDSYRANMFAVKCADDT 327
             G+ +++ +++ M  +IK+   E  + P ++ Q  L +++ H + +    + V  A   
Sbjct: 39  PTGFALWERMVAEMDDRIKETGAENASFPLLIPQSYLSKEAQHVEGFAPECWTVTHAGGK 98

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
             +     ++P +        +  +KSYR+LP+ L ++ +V R E        +R   F 
Sbjct: 99  ELE-EPVVVRPTSETVIGESMSRWVKSYRDLPLLLNQWCNVMRYEMR--TRLFLRSSEFL 155

Query: 388 QDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
             + H    T E       +I +    +Y+DF      ++         G          
Sbjct: 156 WQEGHTAHATFEDAAAYNRRILH---EVYQDF------MENVVALPVFTG---------- 196

Query: 447 IMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSR 505
            +K   +                  GA      E +++D  G+  Q GT   +  N    
Sbjct: 197 -LKTAAERFA---------------GAINTFTCEAMMRD--GKALQAGTAHELGQNFAKA 238

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTIT 561
           F+  Y+ S  ++ H        +G   R +G +I     +    +P  L+P+QA V T+ 
Sbjct: 239 FDIQYLGSDGKQHHA---WTTSWGVSTRMVGALIMGHGDDSGLRVPPRLAPVQAYVMTVK 295

Query: 562 S--SAVEYAQEIANLLKSHHLSIETDFRNET-INYKIREHSIKKIPIIIICGDKEASERS 618
                 E A +    L++  +  + + R++     +  +  +K  P+ +  G ++ +E  
Sbjct: 296 DGEGVSEAAAKTHAALRAAGVRSKLNDRSDVAFGRRAVDAELKGYPVRLEIGPRDVAEGK 355

Query: 619 IGIRRFGSTTTQKVSLLDAIP 639
             + R  + T  +VSL     
Sbjct: 356 AMLVRRIAGTKTQVSLDGVTE 376


>gi|301169449|emb|CBW29049.1| prolyl-tRNA synthetase [Haemophilus influenzae 10810]
          Length = 572

 Score =  152 bits (384), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 62/329 (18%), Positives = 119/329 (36%), Gaps = 17/329 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q   +       +++   H+ + R   +  +A   SG+  W   G ++ + +   +R 
Sbjct: 3   TSQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMA---SGLYNWLPTGIRVLKKVEKVVRE 59

Query: 286 KIKDD-YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LW++SG WD Y   +   +   +     R F L P +    
Sbjct: 60  EMNKGGAIEVLMPVVQPAELWEESGRWDQYGPELLRFEDRGN-----RNFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP+ L +  + +R+E      G+MR R F   DA+ F T ++     
Sbjct: 115 TDLVRREVSSYKQLPLNLYQIQTKFRDEVRPRF-GVMRSREFIMKDAYSFHTTQESLQAT 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++ +  +I+   G +   V+  T       S      A +    V+ + ++     I
Sbjct: 174 YDVMYQVYSNIFNRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVFSTESDFAANI 233

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
                +  G    P  E  L D          +   FNLP       +       +  ++
Sbjct: 234 ELAEAIAIGERQAPTAEMCLVDT-PNAKTIAELVEQFNLPIEKTVKTLIVKGADENQPLV 292

Query: 524 HRAVFGSIERFIGIMIENFKGNLPLWLSP 552
              + G  E     + E      PL   P
Sbjct: 293 ALIIRGDHE-----LNEIKAQKHPLVADP 316



 Score = 92.5 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 64/168 (38%), Gaps = 14/168 (8%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           I R  + G I Q+        NA       +   P+++    +G  + R +   IE +  
Sbjct: 403 IKRGIEVGHIFQLGKKYSEAMNATVQGEDGK---PLVMTMGCYGIGVTRVVASAIEQHHD 459

Query: 544 GNLPLWL----SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
               +W     +P    +  +    + +  +YA+E+   L+S  + +  D R E      
Sbjct: 460 DRGIIWPSDEIAPFTVAIVPMNMHKSEAVQKYAEELYRTLQSQGVDVIFDDRKERPGVMF 519

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +  +  +P +++ G+K      I  +   +   + +S    + +L +
Sbjct: 520 ADMELIGVPHMVVIGEKNLDNGEIEYKNRRTGEKEMISKDKLLSVLNE 567


>gi|332286931|ref|YP_004418842.1| prolyl-tRNA synthetase [Pusillimonas sp. T7-7]
 gi|330430884|gb|AEC22218.1| prolyl-tRNA synthetase [Pusillimonas sp. T7-7]
          Length = 577

 Score =  152 bits (384), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 45/218 (20%), Positives = 89/218 (40%), Gaps = 11/218 (5%)

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR 284
             ++  +        E+E + H+ + R   +    +   G+  +   G K+ + + + +R
Sbjct: 2   HASKYHINTLKEAPAEAEVKSHQLMTRAGMIR---KAAGGIYTYMPLGLKVLRKIENIVR 58

Query: 285 RKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPG 343
           +++ +    E+  P V    LW +SG W+ Y A +  +K      +  R F L+P +   
Sbjct: 59  QEMDQAGAIELLMPVVQPAELWVESGRWEQYGAELLRIKD-----RHQRDFVLQPTSEEV 113

Query: 344 HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE 403
              +  + + S+R+LP+      + +R+E      GLMR R FT  DA+ F   E     
Sbjct: 114 ITDIARNEIHSWRQLPLNFYHIQTKFRDERRPRF-GLMRGREFTMKDAYSFDRDEASAQS 172

Query: 404 CLK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
               +++  + I++  G     V   T       S   
Sbjct: 173 SYDTMYDAYMRIFQRLGLTFRAVAADTGSIGGSRSHEF 210



 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/164 (18%), Positives = 65/164 (39%), Gaps = 13/164 (7%)

Query: 486 AIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFK 543
           AI R  + G +  +        NA ++ +  +   P ++    +G  I R     IE   
Sbjct: 408 AIQRGIEVGHVFFLGDKYSKALNATFLETDGK---PALLQMGCYGIGISRIAAAAIEQCH 464

Query: 544 GN----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
                  P  ++P + ++  +    + +    A+E+   LK+  + +  D R+       
Sbjct: 465 DEKGIIWPKSIAPFELVICPMGWHKSETVRNTAEELYQSLKAQGVEVMLDDRDVRPGIMF 524

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
            +  +  +P+ I  GD+   E  + I+      T KV++ DA+ 
Sbjct: 525 ADWELIGVPLRITIGDRGLKEGIVEIQARRQEITNKVAVADALD 568


>gi|82523942|emb|CAI78664.1| prolyl-tRNA synthetase [uncultured delta proteobacterium]
          Length = 574

 Score =  152 bits (384), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 45/248 (18%), Positives = 95/248 (38%), Gaps = 11/248 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  L        ++E   H+ + R   +  +    SG+  +   G+++ + +   +R +
Sbjct: 4   SEMHLPTLREIPSDAEVVSHKLMIRAGMIRKL---TSGIYSYLPLGYRVIRKVEQIVREE 60

Query: 287 IK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E+  P V    LW++SG W  Y   +   +   D     R +   P +     
Sbjct: 61  MNKAGAQEVFMPMVQPSELWEESGRWVHYGKELLRFRDRHD-----RPYCFGPTHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +  + +K+YR+LP+ L +  + +R+E      G+MR R F   DA+ F   E       
Sbjct: 116 DLVRNDVKTYRQLPLNLYQIQTKFRDEVRPRF-GVMRCREFGMKDAYSFDADEAGAQNSY 174

Query: 406 -KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            K+     +I++  G     V+  +       S      A++    ++   K S    + 
Sbjct: 175 EKMFTAYNNIFRRCGLRFRPVEADSGSIGGKYSHEFMVMADSGEDAMVFCEKCSYAANLE 234

Query: 465 TGVLLGEG 472
              +    
Sbjct: 235 KAEIAQPA 242



 Score = 82.1 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 68/163 (41%), Gaps = 10/163 (6%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNL 546
           R  + G +  +         A Y++   ++   VMI       I R +   IE N+    
Sbjct: 404 RGIEVGHVFKLGTKYSKAMKAVYLDKDGQEK--VMIMGCYGIGIGRTVAACIEQNYDDQG 461

Query: 547 PLW---LSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
            +W   L+P   I+T +     S  + A+ + N ++   + +  D R+E    K  +  +
Sbjct: 462 IVWPVPLAPYHVIITPVNVNDKSISDVAENLYNKMQDKKIEVILDDRDERAGVKFNDADL 521

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             IP+ ++ G K  ++  + ++   +   + +++ + +  + +
Sbjct: 522 IGIPLRVVIGQKNLAQNKVELKIRKTGENKLIAVDEIVNEVKE 564


>gi|303228556|ref|ZP_07315384.1| proline--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
 gi|302516803|gb|EFL58717.1| proline--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
          Length = 572

 Score =  152 bits (384), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 45/228 (19%), Positives = 92/228 (40%), Gaps = 10/228 (4%)

Query: 243 KRDHRKLAREMDLF--HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQV 299
             D   +++++ L    + +  +G+  +   GW+  + + + +R ++     +EI  P +
Sbjct: 15  PSDADVVSQQLMLRAGFMRKVANGLYSFLPLGWRSIKKIEAIIREEMDRSGAQEIMMPIL 74

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
               +W++SG W++Y A M  +    D       + L P +      +  + + SYR+LP
Sbjct: 75  QPAEIWKESGRWNAYGAEMMRINDRHDV-----EYCLGPTHEEMITTLVKNEINSYRQLP 129

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDF 418
           V L +  S +R+E     +GLMR R F   D + F   +   +   K +++    I+   
Sbjct: 130 VNLYQIQSKFRDERRPR-YGLMRSREFIMKDGYSFDIDDAAADVSYKNMYDAYSRIFTRC 188

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           G     V+  +       +      AE     ++          I  G
Sbjct: 189 GLTFRPVEADSGAIGGSNTHEFMAIAEAGEADIIHCSACDYAANIEIG 236



 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 19/154 (12%), Positives = 52/154 (33%), Gaps = 11/154 (7%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN----LPLWLSP 552
           +         A Y++ +     P  +    +G  + R +   IE +        P  ++P
Sbjct: 417 LGTKYSESLQATYLDQNG---RPNAMVMGCYGIGVSRTLAAAIEQYHDENGIIWPRAIAP 473

Query: 553 IQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIIC 609
            + ++  I     + +  +  I + L ++ + +  D R +    K ++  +   P+ I  
Sbjct: 474 FEVVIVPINAKDEALMSTSTSIYDTLLNNKVDVLLDDRKDRAGVKFKDADLIGYPLRITV 533

Query: 610 GDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
                    + IR   +       + +    + +
Sbjct: 534 SKNTLESNEVEIRVRKTGEAINCPIDEVSNKVQE 567


>gi|317047006|ref|YP_004114654.1| prolyl-tRNA synthetase [Pantoea sp. At-9b]
 gi|316948623|gb|ADU68098.1| prolyl-tRNA synthetase [Pantoea sp. At-9b]
          Length = 572

 Score =  152 bits (384), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 53/249 (21%), Positives = 102/249 (40%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            TQ  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TTQYLLSTLKETPSDAEVISHQLMLRAGMIRKLA---SGLYTWLPTGVRVLRKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    EI+ P V    LW++SG W+ Y   +  +K      +  R F L P +    
Sbjct: 60  EMNNAGAIEISMPVVQPADLWEESGRWEQYGPELLRIKD-----RHERPFVLGPTHEEVV 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+ L +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLIRNELSSYKQLPLNLYQIQTKFRDEVRPRF-GVMRSREFIMKDAYSFHTSQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++      +   G +   V+  T       S      A++    V+ + ++     I
Sbjct: 174 YDAMYRAYSQSFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVIFSSESDYAANI 233

Query: 464 NTGVLLGEG 472
                L   
Sbjct: 234 EKAEALAPA 242



 Score = 79.1 bits (193), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 56/167 (33%), Gaps = 13/167 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           I R  + G I Q+         A             ++    +G  I R +   IE    
Sbjct: 405 IKRGIEVGHIFQLGTKYSDALKAAVQGEDG---RNQIMTMGCYGIGITRVVAAAIEQNHD 461

Query: 545 N----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                 P  L+P +  +  +         E A E+ N L++  + +  D R E       
Sbjct: 462 ERGIIWPAALAPFEVAILPMNMHKSFRVKEVADELYNALRAKGIDVILDDRKERPGVMFA 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  +  +P  I+ GD+      I  +   ++  + +   + +  L K
Sbjct: 522 DMELIGVPHTIVIGDRNLDNAEIEYKARSASEKEMIKHSEIVDFLAK 568


>gi|254516715|ref|ZP_05128774.1| prolyl-tRNA synthetase [gamma proteobacterium NOR5-3]
 gi|219675138|gb|EED31505.1| prolyl-tRNA synthetase [gamma proteobacterium NOR5-3]
          Length = 571

 Score =  152 bits (384), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 50/249 (20%), Positives = 100/249 (40%), Gaps = 11/249 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +T +     ++E   HR + R   +  ++   SG+  W   G K+ + +   +R +
Sbjct: 4   SEFLITTHKETPADAEIVSHRLMLRAGLIRKLS---SGLYTWMPMGLKVLRKVERVVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P V    LWQ+SG W+ Y   +  ++      +  R F L P +     
Sbjct: 61  MDAAGALEMAMPMVQPAELWQESGRWEQYGPELLRIQD-----RHNRDFCLGPTHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +  + + SY++LP+ L +  +  R+E      G+MR R F   DA+ F + +    E  
Sbjct: 116 DIVRNEISSYKQLPLNLYQIQNKVRDEIRPRF-GIMRAREFLMKDAYSFHSDQASLEETY 174

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
           + +H     +++  G +   V   +       S      A++    +  +  +     I 
Sbjct: 175 QVMHGAYSRVFERLGLDFRPVMADSGSIGGNTSHEFHVLADSGEDAIAFSDSSDYAANIE 234

Query: 465 TGVLLGEGA 473
               L E A
Sbjct: 235 RAETLDESA 243



 Score = 87.5 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 35/178 (19%), Positives = 68/178 (38%), Gaps = 13/178 (7%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
           P  +      I R  + G I Q+        NA  ++ +      V I    +G  + R 
Sbjct: 392 PSPDGQGSLQIRRGIEVGHIFQLGTKYSEAMNARVLDENG---RNVTISMGCYGIGVSRI 448

Query: 535 IGIMIENFKGN----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDF 586
           +   IE    +     P  ++P Q  +  +    +++  E A+ +        + +  D 
Sbjct: 449 VAAAIEQNHDDRGIIWPNAMTPFQLAIVPLNMHKSTAVAEAAEALHAQCLEEGIDVLMDD 508

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           RNE    K  +  +  IP  I+ GD+  +E  +  +    +  Q+V +  A+  LT +
Sbjct: 509 RNERPGVKFADMELLGIPHRIVIGDRSLAEGELEYQGRRDSEAQRVPVAQAMKFLTDQ 566


>gi|189462032|ref|ZP_03010817.1| hypothetical protein BACCOP_02709 [Bacteroides coprocola DSM 17136]
 gi|189431246|gb|EDV00231.1| hypothetical protein BACCOP_02709 [Bacteroides coprocola DSM 17136]
          Length = 554

 Score =  152 bits (384), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 53/228 (23%), Positives = 99/228 (43%), Gaps = 2/228 (0%)

Query: 14  IKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAV 72
            K+FP  +T  D+    +  +    V+  +N KV  L+  V     IE +   +P  +  
Sbjct: 12  TKDFPEGSTLLDIYNGFNLEMPYGPVSAKVNNKVEGLNFKVYYNKDIEFLDITNPSGMRT 71

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIAR 132
              S   I+ +AV+ ++P+  +++   +  G+Y     ++    D++ +I++KMQEII  
Sbjct: 72  YFRSLCFILVKAVEELYPQGSISLEHPVSKGYYCTLHLDRSIGLDDVTRIKQKMQEIITD 131

Query: 133 DSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTG 192
           + PF +     E+A ELF  +    K ++L++   +     YR G+  D   G  V STG
Sbjct: 132 NIPFQRIECHTEQAVELFTQRGMMDKAKLLKT-SGQLYTFYYRLGDTIDYYYGSLVPSTG 190

Query: 193 QVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
            +K F  +    G   R  + +               E+ Q  +   +
Sbjct: 191 YIKLFDIVKYYDGLLLRIPNRKNPQKLEELVKQEKMLEVFQEYHRWNQ 238


>gi|119191888|ref|XP_001246550.1| hypothetical prolyl-tRNA synthetase [Coccidioides immitis RS]
          Length = 603

 Score =  152 bits (384), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 81/419 (19%), Positives = 153/419 (36%), Gaps = 68/419 (16%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHL-WQQSGHWDSYRAN 317
            D SG        + I++ + S+   KIK    +  + P  + + +  ++  H + + A 
Sbjct: 116 YDVSGCFVLKPHSFFIWEEIQSWFNDKIKKMGVKNCSFPLFVSEDVLKKEKDHIEGFAAE 175

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           +  V  A  +  + +  A++P +       +   ++S+R+LP++L ++ SV R E     
Sbjct: 176 VAWVTHAGSSELEKK-IAIRPTSETVMYPYYAKWIRSHRDLPLKLNQWNSVVRWEFKNP- 233

Query: 378 HGLMRVRGFTQDDAHVFCTKEQMFN-ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
              +R R F   + H     E     E L+I      +Y+      ++    T  EK  G
Sbjct: 234 QPFLRTREFLWQEGHTAHLTEAAAREEVLQILQHYAHVYEQLLAIPVIRGQKTDKEKFAG 293

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
                                                 Y    E  +  A GR  Q GT 
Sbjct: 294 G------------------------------------LYTTTVEGYIP-ATGRGIQGGTS 316

Query: 497 Q-VDFNLPSRFNAFYVNSHS---EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
             +  N    F     +  S   EK  P+ + +  +G   R IG+M+     N  L L P
Sbjct: 317 HGLGQNFSKMFGITVEDPTSKPDEKKPPLHVWQNSWGLSTRTIGVMVMVHSDNRGLVLPP 376

Query: 553 ----IQAIVTTIT----------SSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIRE 597
               +Q ++  +           +S       +A++L++  + +E D R   +  +K  +
Sbjct: 377 RVADVQTVIVPVGLTAKTPDDVRASINAEIDHLASVLEAAGIRVEIDKREGYSPGWKFND 436

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRF---GSTTTQKVSLLD---AIPILTKESLPPDC 650
             +K IP+ +  G  E+S   +   R    G      + + +   A+P L  E++  D 
Sbjct: 437 WELKGIPLRLEFGPGESSGGFVTTSRRDIPGKEGKSTIPIAELATAVPALL-ETIQADL 494


>gi|157147374|ref|YP_001454693.1| prolyl-tRNA synthetase [Citrobacter koseri ATCC BAA-895]
 gi|166980115|sp|A8AL94|SYP_CITK8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|157084579|gb|ABV14257.1| hypothetical protein CKO_03172 [Citrobacter koseri ATCC BAA-895]
          Length = 572

 Score =  152 bits (384), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 51/250 (20%), Positives = 100/250 (40%), Gaps = 11/250 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGLRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E++ P V    LWQ+SG W+ Y   +       +     R F L P +    
Sbjct: 60  EMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGE-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLIRNELSSYKQLPLNFFQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHTSQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   G +   V+  T       S      A++    V+ +  +     I
Sbjct: 174 YDAMYAAYSKIFSRMGLDFRAVQADTGSIGGNASHEFQVLAQSGEDDVIFSDSSDYAANI 233

Query: 464 NTGVLLGEGA 473
                +   A
Sbjct: 234 EFAEAVAPKA 243



 Score = 83.7 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 57/177 (32%), Gaps = 13/177 (7%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
           P  +      I R  + G I Q+         A             ++    +G  + R 
Sbjct: 395 PSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDG---RNQILTMGCYGIGVTRV 451

Query: 535 IGIMIENFKGN----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDF 586
           +   IE          P  ++P Q  +  +         E A+++   L++  + +  D 
Sbjct: 452 VAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYGELRAQGIEVLMDD 511

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           R E       +  +  IP  I+ GD+      I  +   +   Q +   + +  L K
Sbjct: 512 RKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGEIVDFLVK 568


>gi|317497213|ref|ZP_07955537.1| prolyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
 gi|316895458|gb|EFV17616.1| prolyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 478

 Score =  152 bits (384), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 73/426 (17%), Positives = 157/426 (36%), Gaps = 59/426 (13%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEE-INT 296
           +E+   + +  + ++ +L   +    G +     G+ I++ +   +  K K+   E +  
Sbjct: 14  MEDDFAQWYTDVVKKAELADYSSVR-GCMILRPNGYAIWENIQKVLDAKFKETGVENVAM 72

Query: 297 PQVLDQHL-WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P  + + L  ++  H + +   +  V    D     R   ++P +       ++  ++S+
Sbjct: 73  PMFIPESLLKKEEDHVEGFAPEVAWVTHGGDKELQER-LCVRPTSETLFCDFYSKIIQSH 131

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA-HVFCTKEQMFNECLKIHNLIISI 414
           R+LP    ++ SV R E   +    +R   F   +      T+E+     +++ N+    
Sbjct: 132 RDLPKLYNQWVSVVRWEK--TTRPFLRTSEFFWQEGHTAHATEEEAEARTVQMLNMYADF 189

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            + +    ++    T  EK  G                                    A 
Sbjct: 190 CEQYLAIPVVKGQKTEKEKFAG------------------------------------AH 213

Query: 475 YGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
                E ++ D  G+  Q GT           F+  Y +  ++  +   +H+  +G   R
Sbjct: 214 STYTIEALMHD--GKALQSGTSHNFGDGFAKAFDIQYTDKDNKLQY---VHQTSWGMSTR 268

Query: 534 FIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDF 586
            IG +I    ++    LP  ++P+Q ++  I       ++ A+EI   L S    ++ D 
Sbjct: 269 IIGAIIMVHGDDSGLVLPPRIAPVQTMIVPIMQKKEGVLDKAEEIRKRLASS-YKVKVDD 327

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK--E 644
            +++  +K  E  ++ IP  I  G K+  +    I R  +     VSL +    L +  E
Sbjct: 328 SDKSPGWKFSEQEVRGIPTRIEIGPKDIEKNQAVIVRRDTREKIIVSLDEIETKLGEVLE 387

Query: 645 SLPPDC 650
            +  D 
Sbjct: 388 QMQNDM 393


>gi|145632080|ref|ZP_01787815.1| frataxin-like protein [Haemophilus influenzae 3655]
 gi|144986987|gb|EDJ93517.1| frataxin-like protein [Haemophilus influenzae 3655]
          Length = 572

 Score =  152 bits (384), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 62/329 (18%), Positives = 119/329 (36%), Gaps = 17/329 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q   +       +++   H+ + R   +  +A   SG+  W   G ++ + +   +R 
Sbjct: 3   TSQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMA---SGLYNWLPTGIRVLKKVEKVVRE 59

Query: 286 KIKDD-YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LW++SG WD Y   +   +   +     R F L P +    
Sbjct: 60  EMNKGGAIEVLMPVVQPAELWEESGRWDQYGPELLRFEDRGN-----RNFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP+ L +  + +R+E      G+MR R F   DA+ F T ++     
Sbjct: 115 TDLVRREVSSYKQLPLNLYQIQTKFRDEVRPRF-GVMRSREFIMKDAYSFHTTQESLQAT 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++ +  +I+   G +   V+  T       S      A +    V+ + ++     I
Sbjct: 174 YDVMYQVYSNIFNRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVFSTESDFAANI 233

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
                +  G    P  E  L D          +   FNLP       +       +  ++
Sbjct: 234 ELAEAIAIGERQAPTAEMCLVDT-PNAKTIAELVEQFNLPIEKTVKTLIVKGADENQPLV 292

Query: 524 HRAVFGSIERFIGIMIENFKGNLPLWLSP 552
              + G  E     + E      PL   P
Sbjct: 293 ALIIRGDHE-----LNEIKAQKHPLVADP 316



 Score = 92.2 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 63/168 (37%), Gaps = 14/168 (8%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           I R  + G I Q+         A       +   P+++    +G  + R +   IE +  
Sbjct: 403 IKRGIEVGHIFQLGKKYSEAMKATVQGEDGK---PLVMTMGCYGIGVTRVVASAIEQHHD 459

Query: 544 GNLPLWL----SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
               +W     +P    +  +    + +  +YA+E+   L+S  + +  D R E      
Sbjct: 460 DRGIIWPSDEIAPFTVAIVPMNMHKSEAVQKYAEELYRTLQSQGVDVIFDDRKERPGVMF 519

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +  +  IP +++ G+K      I  +   +   + +S    + +L +
Sbjct: 520 ADMELIGIPHMVVIGEKNLDNGEIEYKNRRTGEKEMISKDKLLSVLNE 567


>gi|145628390|ref|ZP_01784191.1| prolyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
 gi|145638474|ref|ZP_01794084.1| prolyl-tRNA synthetase [Haemophilus influenzae PittII]
 gi|144980165|gb|EDJ89824.1| prolyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
 gi|145272803|gb|EDK12710.1| prolyl-tRNA synthetase [Haemophilus influenzae PittII]
 gi|309751606|gb|ADO81590.1| Prolyl-tRNA synthetase [Haemophilus influenzae R2866]
 gi|309973773|gb|ADO96974.1| Prolyl-tRNA synthetase [Haemophilus influenzae R2846]
          Length = 572

 Score =  152 bits (384), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 62/329 (18%), Positives = 119/329 (36%), Gaps = 17/329 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q   +       +++   H+ + R   +  +A   SG+  W   G ++ + +   +R 
Sbjct: 3   TSQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMA---SGLYNWLPTGIRVLKKVEKVVRE 59

Query: 286 KIKDD-YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LW++SG WD Y   +   +   +     R F L P +    
Sbjct: 60  EMNKGGAIEVLMPVVQPAELWEESGRWDQYGPELLRFEDRGN-----RNFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP+ L +  + +R+E      G+MR R F   DA+ F T ++     
Sbjct: 115 TDLVRREVSSYKQLPLNLYQIQTKFRDEVRPRF-GVMRSREFIMKDAYSFHTTQESLQAT 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++ +  +I+   G +   V+  T       S      A +    V+ + ++     I
Sbjct: 174 YDVMYQVYSNIFNRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVFSTESDFAANI 233

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
                +  G    P  E  L D          +   FNLP       +       +  ++
Sbjct: 234 ELAEAIAIGERQAPTAEMCLVDT-PNAKTIAELVEQFNLPIEKTVKTLIVKGADENQPLV 292

Query: 524 HRAVFGSIERFIGIMIENFKGNLPLWLSP 552
              + G  E     + E      PL   P
Sbjct: 293 ALIIRGDHE-----LNEIKAQKHPLVADP 316



 Score = 94.1 bits (232), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 27/168 (16%), Positives = 63/168 (37%), Gaps = 14/168 (8%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           I R  + G I Q+         A       +   P+++    +G  + R +   IE +  
Sbjct: 403 IKRGIEVGHIFQLGKKYSEAMKATVQGEDGK---PLVMTMGCYGIGVTRVVASAIEQHHD 459

Query: 544 GNLPLWL----SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
               +W     +P    +  +    + +  +YA+E+   L+S  + +  D R E      
Sbjct: 460 ERGIIWPSDEIAPFTVAIVPMNMHKSEAVQKYAEELYRTLQSQGVDVIFDDRKERPGVMF 519

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +  +  +P +++ G+K      I  +   +   + +S    + +L +
Sbjct: 520 ADMELIGVPHMVVIGEKNLENGEIEYKNRRTGEKEMISKDQLLSVLNE 567


>gi|260583173|ref|ZP_05850953.1| prolyl-tRNA synthetase [Haemophilus influenzae NT127]
 gi|260093791|gb|EEW77699.1| prolyl-tRNA synthetase [Haemophilus influenzae NT127]
          Length = 572

 Score =  152 bits (384), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 62/329 (18%), Positives = 120/329 (36%), Gaps = 17/329 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q   +       +++   H+ + R   +  +A   SG+  W   G ++ + +   +R 
Sbjct: 3   TSQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMA---SGLYNWLPTGIRVLKKVEKVVRE 59

Query: 286 KIKDD-YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LW++SG W+ Y   +   +   +     R F L P +    
Sbjct: 60  EMNKGGAIEVLMPVVQPAELWEESGRWEQYGPELLRFEDRGN-----RNFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP+ L +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLVRREVSSYKQLPLNLYQIQTKFRDEVRPRF-GVMRSREFIMKDAYSFHTTQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++ +  +I+   G +   V+  T       S      A +    V+ + ++     I
Sbjct: 174 YDVMYQVYSNIFNRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVFSTESDFAANI 233

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
                +  G    P  E  L D          +   FNLP       +       +  ++
Sbjct: 234 ELAEAVAIGERQAPTAEMCLVDT-PNAKTIAELVEQFNLPIEKTVKTLIVKGADENQPLV 292

Query: 524 HRAVFGSIERFIGIMIENFKGNLPLWLSP 552
              + G  E     + E      PL   P
Sbjct: 293 ALIIRGDHE-----LNEIKAQKHPLVADP 316



 Score = 92.2 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 63/168 (37%), Gaps = 14/168 (8%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           I R  + G I Q+         A       +   P+++    +G  + R +   IE +  
Sbjct: 403 IKRGIEVGHIFQLGKKYSEAMKATVQGEDGK---PLVMTMGCYGIGVTRVVASAIEQHHD 459

Query: 544 GNLPLWL----SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
               +W     +P    +  +    + +  +YA+E+   L+S  + +  D R E      
Sbjct: 460 DRGIIWPSDEIAPFTVAIVPMNMHKSEAVQKYAEELYRTLQSQGVDVIFDDRKERPGVMF 519

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +  +  IP +++ G+K      I  +   +   + +S    + +L +
Sbjct: 520 ADMELIGIPHMVVIGEKNLDNGEIEYKNRRTGEKEMISKDKLLSVLNE 567


>gi|145634860|ref|ZP_01790568.1| prolyl-tRNA synthetase [Haemophilus influenzae PittAA]
 gi|145268026|gb|EDK08022.1| prolyl-tRNA synthetase [Haemophilus influenzae PittAA]
          Length = 572

 Score =  152 bits (384), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 62/329 (18%), Positives = 119/329 (36%), Gaps = 17/329 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q   +       +++   H+ + R   +  +A   SG+  W   G ++ + +   +R 
Sbjct: 3   TSQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMA---SGLYNWLPTGIRVLKKVEKVVRE 59

Query: 286 KIKDD-YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LW++SG WD Y   +   +   +     R F L P +    
Sbjct: 60  EMNKGGAIEVLMPVVQPAELWEESGRWDQYGPELLRFEDRGN-----RNFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP+ L +  + +R+E      G+MR R F   DA+ F T ++     
Sbjct: 115 TDLVRREVSSYKQLPLNLYQIQTKFRDEVRPRF-GVMRSREFIMKDAYSFHTTQESLQAT 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++ +  +I+   G +   V+  T       S      A +    V+ + ++     I
Sbjct: 174 YDVMYQVYSNIFNRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVFSTESDFAANI 233

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
                +  G    P  E  L D          +   FNLP       +       +  ++
Sbjct: 234 ELAEAIAIGERQAPTAEMCLVDT-PNAKTIAELVEQFNLPIEKTVKTLIVKGADENQPLV 292

Query: 524 HRAVFGSIERFIGIMIENFKGNLPLWLSP 552
              + G  E     + E      PL   P
Sbjct: 293 ALIIRGDHE-----LNEIKAQKHPLVADP 316



 Score = 92.2 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 63/168 (37%), Gaps = 14/168 (8%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           I R  + G I Q+         A       +   P+++    +G  + R +   IE +  
Sbjct: 403 IKRGIEVGHIFQLGKKYSEAMKATVQGEDGK---PLVMTMGCYGIGVTRVVASAIEQHHD 459

Query: 544 GNLPLWL----SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
               +W     +P    +  +    + +  +YA+E+   L+S  + +  D R E      
Sbjct: 460 ERGIIWPSDEIAPFTVAIVPMNMHKSEAVQKYAEELYRTLQSQGVDVIFDDRKERPGVMF 519

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +  +  +P +++ G+K      I  +   S   + +S    + +L +
Sbjct: 520 ADMELIGVPHMVVIGEKNLDNGEIEYKNRRSGEKEMISKDKLLSVLNE 567


>gi|284051766|ref|ZP_06381976.1| prolyl-tRNA synthetase [Arthrospira platensis str. Paraca]
          Length = 601

 Score =  152 bits (384), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 61/249 (24%), Positives = 100/249 (40%), Gaps = 8/249 (3%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q           E+E   H+ L R   +  I   GSGV  +    W++ Q +   +R +
Sbjct: 4   SQMLFVTLREDPTEAEIPSHKLLLRAGYIRRI---GSGVYAYLPLMWRVLQKVSQIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E   PQV    LW++SG WD+Y      +    D  +  R+ AL P +     
Sbjct: 61  MNATGAQECLLPQVQPSELWKESGRWDTYTKAEGIMFSLKD--RRDRSLALGPTHEEVIT 118

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           AV    ++SY++LP+ L +  + +R+E      GLMR R F   D + F T E    +  
Sbjct: 119 AVARDMIRSYQQLPLHLYQIQTKFRDEIRPRF-GLMRGREFIMKDGYSFHTSEDSLKQTY 177

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
           + +     +I +  G +   V+  +      GS      A+     VL T        + 
Sbjct: 178 QDMDRAYRNILRRCGLDFCAVEADSGAIGGSGSQEFMVLADAGEDEVLYTPDGKYAANVE 237

Query: 465 TGVLLGEGA 473
             V L   A
Sbjct: 238 KAVSLPPDA 246



 Score = 80.6 bits (197), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 27/162 (16%), Positives = 61/162 (37%), Gaps = 9/162 (5%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I Q+         A Y +   E   P+++     G        + +++  +  
Sbjct: 436 RGIEVGHIFQLGTKYSQAMGATYTSETGEDL-PLVMGCYGVGVSRLAQAAVEQSYNKDGI 494

Query: 548 LWL---SPIQAIVTT---ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W    +P   I+T      +  +  AQ++ + L    +    D RNE    K ++  + 
Sbjct: 495 IWPVAIAPYHVIITVPNVSDNQQMAIAQQLYSQLNQAGVETLLDDRNERAGVKFKDADLV 554

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            IP  I+ G +      + + +     + +V +   + +L +
Sbjct: 555 GIPYRIVTG-RAIKSGKVELVQRADHESSEVPIEQVVSLLQQ 595


>gi|209525764|ref|ZP_03274300.1| prolyl-tRNA synthetase [Arthrospira maxima CS-328]
 gi|209493737|gb|EDZ94056.1| prolyl-tRNA synthetase [Arthrospira maxima CS-328]
          Length = 601

 Score =  152 bits (384), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 61/249 (24%), Positives = 100/249 (40%), Gaps = 8/249 (3%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q           E+E   H+ L R   +  I   GSGV  +    W++ Q +   +R +
Sbjct: 4   SQMLFVTLREDPTEAEIPSHKLLLRAGYIRRI---GSGVYAYLPLMWRVLQKVSQIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E   PQV    LW++SG WD+Y      +    D  +  R+ AL P +     
Sbjct: 61  MNATGAQECLLPQVQPSELWKESGRWDTYTKAEGIMFSLKD--RRDRSLALGPTHEEVIT 118

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           AV    ++SY++LP+ L +  + +R+E      GLMR R F   D + F T E    +  
Sbjct: 119 AVARDMIRSYQQLPLHLYQIQTKFRDEIRPRF-GLMRGREFIMKDGYSFHTSEDSLKQTY 177

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
           + +     +I +  G +   V+  +      GS      A+     VL T        + 
Sbjct: 178 QDMDRAYRNILRRCGLDFCAVEADSGAIGGSGSQEFMVLADAGEDEVLYTPDGKYAANVE 237

Query: 465 TGVLLGEGA 473
             V L   A
Sbjct: 238 KAVSLPPDA 246



 Score = 81.0 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 27/162 (16%), Positives = 61/162 (37%), Gaps = 9/162 (5%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I Q+         A Y +   E   P+++     G        + +++  +  
Sbjct: 436 RGIEIGHIFQLGTKYSQAMGATYTSETGEDL-PLVMGCYGVGVSRLAQAAVEQSYDKDGI 494

Query: 548 LWL---SPIQAIVTT---ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W    +P   I+T      +  +  AQ++ + L    +    D RNE    K ++  + 
Sbjct: 495 IWPVAIAPYHVIITVPNVSDNQQMAIAQQLYSQLNQAGVETLLDDRNERAGVKFKDADLV 554

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            IP  I+ G +      + + +     + +V +   + +L +
Sbjct: 555 GIPYRIVTG-RAIKSGKVELVQRADHESSEVPIEQVVSLLQQ 595


>gi|317402479|gb|EFV83047.1| ProS protein [Achromobacter xylosoxidans C54]
          Length = 576

 Score =  152 bits (384), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 59/300 (19%), Positives = 107/300 (35%), Gaps = 17/300 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +   +        E+E   H+ + R   +  +A    G+  +   G KI + + + +R 
Sbjct: 3   ASNYHINTLKEAPSEAEVASHQLMTRAGMIRKLA---GGIYTYMPLGLKIIRKVEAIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LW +SG W+ Y A +  +K      +  R F L+P +    
Sbjct: 60  EMNASGAIELLMPVVQPAELWMESGRWEQYGAELLRIKD-----RHQRDFVLQPTSEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + + SYR+LP+      + +R+E      GLMR R FT  DA+ F   E    + 
Sbjct: 115 TDIARNEIHSYRQLPLNFYHIQTKFRDERRPRF-GLMRGREFTMKDAYSFDRDEAGAQKS 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++   + I+   G E   V   T       S      A+     ++    +     I
Sbjct: 174 YDNMYAAYMRIFGRLGLEFRAVAADTGSIGGTRSHEFQVIADTGEDLLVYNADSDYAANI 233

Query: 464 NTGVLLG----EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
                 G     GA   P  +     A   +       +D  L     +  + +  +K  
Sbjct: 234 ELAEAPGLYAERGAPTQPMADVATPGAAKCEDVARL--LDLPLERTVKSIVLATDGDKGK 291



 Score = 71.4 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 22/154 (14%), Positives = 55/154 (35%), Gaps = 9/154 (5%)

Query: 497 QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN----LPLWLS 551
            V +       A       E   P ++    +G  I R +G  IE    +     P  ++
Sbjct: 416 HVFYLGKKYSEALKATFLDETGKPAVLEMGCYGIGITRIVGAAIEQNHDDRGIIWPRAIA 475

Query: 552 PIQAIVTTITSSAVEYAQ----EIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIII 607
           P + ++  +     E  +    ++   L +  + +  D R+        E  +   P+ +
Sbjct: 476 PFEVVICPVGWGKSETVRNTSLKLYESLLARGVDVILDDRDARPGVMFAEWELIGAPLRV 535

Query: 608 ICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
             G++  ++  + ++    T   K+ +  A+  +
Sbjct: 536 TVGERGLNDGVVELQARRETEAAKIPVESALETV 569


>gi|145637732|ref|ZP_01793384.1| prolyl-tRNA synthetase [Haemophilus influenzae PittHH]
 gi|145269081|gb|EDK09032.1| prolyl-tRNA synthetase [Haemophilus influenzae PittHH]
          Length = 572

 Score =  152 bits (384), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 62/329 (18%), Positives = 119/329 (36%), Gaps = 17/329 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q   +       +++   H+ + R   +  +A   SG+  W   G ++ + +   +R 
Sbjct: 3   TSQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMA---SGLYNWLPTGIRVLKKVEKVVRE 59

Query: 286 KIKDD-YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LW++SG WD Y   +   +   +     R F L P +    
Sbjct: 60  EMNKGGAIEVLMPVVQPAELWEESGRWDQYGPELLRFEDRGN-----RNFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP+ L +  + +R+E      G+MR R F   DA+ F T ++     
Sbjct: 115 TDLVRREVSSYKQLPLNLYQIQTKFRDEVRPRF-GVMRSREFIMKDAYSFHTTQESLQAT 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++ +  +I+   G +   V+  T       S      A +    V+ + ++     I
Sbjct: 174 YDVMYQVYSNIFNRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVFSTESDFAANI 233

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
                +  G    P  E  L D          +   FNLP       +       +  ++
Sbjct: 234 ELAEAIAIGERQAPTAEMCLVDT-PNAKTIAELVEQFNLPIEKTVKTLIVKGADENQPLV 292

Query: 524 HRAVFGSIERFIGIMIENFKGNLPLWLSP 552
              + G  E     + E      PL   P
Sbjct: 293 ALIIRGDHE-----LNEIKAQKHPLVADP 316



 Score = 91.8 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 27/168 (16%), Positives = 63/168 (37%), Gaps = 14/168 (8%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           I R  + G I Q+         A       +   P+++    +G  + R +   IE +  
Sbjct: 403 IKRGIEVGHIFQLGKKYSEAMKATVQGEDGK---PLVMTMGCYGIGVTRVVASAIEQHHD 459

Query: 544 GNLPLWL----SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
               +W     +P    +  +    + +  +YA+E+   L+S  + +  D R E      
Sbjct: 460 ERGIIWPSDEIAPFTVAIVPMNMHKSEAVQKYAEELYRTLQSQGVDVIFDDRKERPGVMF 519

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +  +  +P +++ G+K      I  +   +   + +S    + +L +
Sbjct: 520 ADMELIGVPHMVVIGEKNLDNGEIEYKNRRTGEKEMISKDKLLSVLNE 567


>gi|291566398|dbj|BAI88670.1| prolyl-tRNA synthetase [Arthrospira platensis NIES-39]
          Length = 601

 Score =  152 bits (384), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 61/249 (24%), Positives = 101/249 (40%), Gaps = 8/249 (3%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q           E+E   H+ L R   +  I   GSGV  +    W++ Q +   +R +
Sbjct: 4   SQMLFVTLREDPTEAEIPSHKLLLRAGYIRRI---GSGVYAYLPLMWRVLQKVSQIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E   PQV    LW++SG WD+Y      +    D  +  R+ AL P +     
Sbjct: 61  MNATGAQECLLPQVQPSELWKESGRWDTYTKAEGIMFSLKD--RRDRSLALGPTHEEVIT 118

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           AV    ++SY++LP+ L +  + +R+E      GLMR R F   D + F T E+   +  
Sbjct: 119 AVARDMIRSYQQLPLHLYQIQTKFRDEIRPRF-GLMRGREFIMKDGYSFHTSEESLKQTY 177

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
           + +     +I +  G +   V+  +      GS      A+     VL T        + 
Sbjct: 178 QDMDRAYRNILRRCGLDFCAVEADSGAIGGSGSQEFMVLADAGEDEVLYTPDGKYAANVE 237

Query: 465 TGVLLGEGA 473
             V L   A
Sbjct: 238 KAVSLPPDA 246



 Score = 80.2 bits (196), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 62/162 (38%), Gaps = 9/162 (5%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I Q+         A Y +   E   P+++     G        + +++  +  
Sbjct: 436 RGIEVGHIFQLGTKYSQAMGATYTSETGEDL-PLVMGCYGVGVSRLAQAAVEQSYDKDGI 494

Query: 548 LWL---SPIQAIVTT---ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W    +P  AI+T      +  +  AQ++ + L    +    D RNE    K ++  + 
Sbjct: 495 IWPVAIAPYHAIITVPNVSDNQQMAIAQQLYSQLNQAGVETLLDDRNERAGVKFKDADLV 554

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            IP  I+ G +      + + +     + +V +   + +L +
Sbjct: 555 GIPYRIVTG-RAIKSGKVELVQRADHESSEVPIEQVVSLLQQ 595


>gi|319775327|ref|YP_004137815.1| prolyl-tRNA synthetase [Haemophilus influenzae F3047]
 gi|319897767|ref|YP_004135964.1| prolyl-tRNA synthetase [Haemophilus influenzae F3031]
 gi|329122677|ref|ZP_08251255.1| proline--tRNA ligase [Haemophilus aegyptius ATCC 11116]
 gi|317433273|emb|CBY81648.1| prolyl-tRNA synthetase [Haemophilus influenzae F3031]
 gi|317449918|emb|CBY86130.1| prolyl-tRNA synthetase [Haemophilus influenzae F3047]
 gi|327472551|gb|EGF17981.1| proline--tRNA ligase [Haemophilus aegyptius ATCC 11116]
          Length = 572

 Score =  152 bits (384), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 62/329 (18%), Positives = 119/329 (36%), Gaps = 17/329 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q   +       +++   H+ + R   +  +A   SG+  W   G ++ + +   +R 
Sbjct: 3   TSQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMA---SGLYNWLPTGIRVLKKVEKVVRE 59

Query: 286 KIKDD-YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LW++SG WD Y   +   +   +     R F L P +    
Sbjct: 60  EMNKGGAIEVLMPVVQPAELWEESGRWDQYGPELLRFEDRGN-----RNFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP+ L +  + +R+E      G+MR R F   DA+ F T ++     
Sbjct: 115 TDLVRREVSSYKQLPLNLYQIQTKFRDEVRPRF-GVMRSREFIMKDAYSFHTTQESLQAT 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++ +  +I+   G +   V+  T       S      A +    V+ + ++     I
Sbjct: 174 YDVMYQVYSNIFNRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVFSTESDFAANI 233

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
                +  G    P  E  L D          +   FNLP       +       +  ++
Sbjct: 234 ELAEAIAIGERQAPTAEMCLVDT-PNVKTIAELVEQFNLPIEKTVKTLIVKGADENQPLV 292

Query: 524 HRAVFGSIERFIGIMIENFKGNLPLWLSP 552
              + G  E     + E      PL   P
Sbjct: 293 ALIIRGDHE-----LNEIKAQKHPLVADP 316



 Score = 91.8 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 27/168 (16%), Positives = 63/168 (37%), Gaps = 14/168 (8%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           I R  + G I Q+         A       +   P+++    +G  + R +   IE +  
Sbjct: 403 IKRGIEVGHIFQLGKKYSEAMKATVQGEDGK---PLVMTMGCYGIGVTRVVASAIEQHHD 459

Query: 544 GNLPLWL----SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
               +W     +P    +  +    + +  +YA+E+   L+S  + +  D R E      
Sbjct: 460 DRGIIWPSDEIAPFTVAIVPMNMHKSEAVQKYAEELYRTLQSQGVDVIFDDRKERPGVMF 519

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +  +  +P +++ G+K      I  +   +   + +S    + +L +
Sbjct: 520 ADMELVGVPHMVVIGEKNLDNGEIEYKNRRTGEKEMISKDKLLSVLNE 567


>gi|325297765|ref|YP_004257682.1| Prolyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
 gi|324317318|gb|ADY35209.1| Prolyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
          Length = 496

 Score =  152 bits (383), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 68/438 (15%), Positives = 157/438 (35%), Gaps = 73/438 (16%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
              E+  + +  L  + DL   +     ++     G+ I++ +   +    K+  +    
Sbjct: 10  KRSENYSQWYNDLVVKADLAEQSPVRGCMVI-KPYGYAIWEKMQHQLDTMFKETGHVNAY 68

Query: 296 TPQVLDQH-LWQQSGHWDSYRANMFAVKCA-------------DDTIKDLRTFALKPMNC 341
            P ++ +  L +++ H + +      V                D   K      ++P + 
Sbjct: 69  FPLLIPKSYLSREAEHVEGFAKECAVVTHYRLKNAEDGSGVIVDPAAKLEEELIIRPTSE 128

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
               + + + + SYR+LP+   ++ +V R E        +R   F   + H   T     
Sbjct: 129 TIIWSTYKNWINSYRDLPILCNQWANVVRWEMR--TRLFLRTAEFLWQEGH---TAHATR 183

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E       ++ +Y DF                                    +      
Sbjct: 184 EEAEAEAQKMLHVYGDF--------------------------------AEKYMAVPVIK 211

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHP 520
            + +      GA      E +++D  G+  QCGT   +  N    FN  +V+ +++  + 
Sbjct: 212 GVKSANERFAGALDTYTIEGLMQD--GKALQCGTSHFLGQNFAKAFNVQFVDKNNKLDY- 268

Query: 521 VMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVEY------AQE 570
             +    +G   R +G +I    ++    LP  L+PIQ ++  I  +  +        + 
Sbjct: 269 --VWATSWGVSTRLMGALIMTHSDDNGLVLPPHLAPIQVVIVPIYKNDEQLKLIDAKVEG 326

Query: 571 IANLLKSHHLSIETDF-RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           I N L++  ++++ D   N+   +K  ++ +K +P+ +  G ++    +I + R  +   
Sbjct: 327 IVNKLRAMGVTVKYDNADNKRPGFKFADYELKGVPVRLAMGGRDLENNTIELMRRDTLEK 386

Query: 630 QKVS---LLDAIPILTKE 644
           +  S   + + +  L +E
Sbjct: 387 ETRSCDGIEEYVKNLLEE 404


>gi|332521716|ref|ZP_08398167.1| prolyl-tRNA synthetase [Lacinutrix algicola 5H-3-7-4]
 gi|332042546|gb|EGI78747.1| prolyl-tRNA synthetase [Lacinutrix algicola 5H-3-7-4]
          Length = 492

 Score =  152 bits (383), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 65/433 (15%), Positives = 158/433 (36%), Gaps = 73/433 (16%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
             E   + + +L  + DL   +     ++     G+ I++ + + + R  K+  ++    
Sbjct: 8   RAEDYSKWYNELVVKADLAENSAVRGCMVI-KPYGYAIWEKMQAELDRMFKETGHQNAYF 66

Query: 297 PQVLDQHLWQ-QSGHWDSYRANMFAVKCA--------------DDTIKDLRTFALKPMNC 341
           P  + + L++ +  + + +      V                 D   K      ++P + 
Sbjct: 67  PLFVPKSLFEAEEKNAEGFAKECAVVTHYRLQNDPDNEGKLRVDPEAKLEEELVVRPTSE 126

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQM 400
                 +   ++SYR+LP+ + ++ +V R E        +R   F   + H    T+ + 
Sbjct: 127 AIIWNTYKGWIQSYRDLPLLINQWANVVRWEMR--TRLFLRTAEFLWQEGHTAHETRVEA 184

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQ 460
             E   ++N+  +  ++F    ++  L +  E+  G++  +                   
Sbjct: 185 LAEAETMNNVYATFAEEFMAIPVVQGLKSESERFAGAEETY------------------- 225

Query: 461 DRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCH 519
                              E +++D  G+  Q GT   +  N    F+  + N   ++ +
Sbjct: 226 -----------------CIEALMQD--GKALQAGTSHFLGQNFAKAFDVKFTNKEGKQDY 266

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNL----PLWLSPIQAIVTTI--TSSAVEYAQEIA- 572
              +    +G   R +G +I     +     P  L+P Q ++  I  T   +E   ++  
Sbjct: 267 ---VWATSWGVSTRLMGALIMTHSDDQGLVLPPNLAPNQVVIVPIYKTDEQLEQITDVVN 323

Query: 573 ---NLLKSHHLSIETDFRN-ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
                L++ H++++ D R       K  +H ++ +P+ I  G ++    ++ + R    T
Sbjct: 324 GIMKDLRAKHITVKFDNRTTHRPGAKFAQHELQGVPLRIAIGARDLENGTVELARRDILT 383

Query: 629 TQKVSLLDAIPIL 641
            + V L   +  +
Sbjct: 384 KETVYLESLVDKV 396


>gi|327392821|dbj|BAK10243.1| Prolyl-tRNA synthetase ProS [Pantoea ananatis AJ13355]
          Length = 572

 Score =  152 bits (383), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 66/330 (20%), Positives = 121/330 (36%), Gaps = 17/330 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            TQ  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TTQYLLSTQKETPSDAEVISHQLMLRAGMIRKLA---SGLYTWLPTGLRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    EI+ P V    LWQ+SG W+ Y   +  V       +  R F L P +    
Sbjct: 60  EMNNAGAIEISMPVVQPADLWQESGRWEQYGPELLRV-----ADRHERPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+ L +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLIRNELSSYKQLPLNLYQIQTKFRDEVRPRF-GVMRSREFIMKDAYSFHTSQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   G +   V+  T       S      A++    V+ +  +     I
Sbjct: 174 YDAMYRAYSQIFNRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVIFSTASDFAANI 233

Query: 464 NTGVLLGEGAFY-GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
                +        P  E    D          +        +     +   +E+    +
Sbjct: 234 EFAEAVAPAGDRPAPAEEMREVDTPNTKTIAELVSQFQQPIEKTVKTLMVKGAEESGHAL 293

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
           +   V G  E     + E      PL  SP
Sbjct: 294 VALLVRGDHE-----LNEIKAEKSPLVASP 318



 Score = 84.1 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 57/167 (34%), Gaps = 13/167 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           I R  + G I Q+         A             ++    +G  I R +   IE    
Sbjct: 405 IKRGIEVGHIFQLGTKYSEAMKASVQGEDG---RNQIMTMGCYGIGITRVVAAAIEQNHD 461

Query: 545 N----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +     P  L+P +  +  +         E A+E+ N L++  + +  D R E       
Sbjct: 462 DRGIIWPAALAPFEVAILPMNMQKSFRVKELAEELYNTLRAKGVEVILDDRKERPGVMFA 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  +  +P  I+ GD+    + I  +   +   Q +   + +  L  
Sbjct: 522 DMELIGVPHTIVIGDRNLDNQEIEYKARRAGEKQMIKQDEIVEFLLN 568


>gi|320036438|gb|EFW18377.1| prolyl-tRNA synthetase [Coccidioides posadasii str. Silveira]
          Length = 603

 Score =  152 bits (383), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 81/419 (19%), Positives = 153/419 (36%), Gaps = 68/419 (16%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHL-WQQSGHWDSYRAN 317
            D SG        + I++ + S+   KIK    +  + P  + + +  ++  H + + A 
Sbjct: 116 YDVSGCFVLKPHSFFIWEEIQSWFNDKIKKMGVKNCSFPLFVSEDVLKKEKDHIEGFAAE 175

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           +  V  A  +  + +  A++P +       +   ++S+R+LP++L ++ SV R E     
Sbjct: 176 VAWVTHAGSSELEKK-IAIRPTSETVMYPYYAKWIRSHRDLPLKLNQWNSVVRWEFKNP- 233

Query: 378 HGLMRVRGFTQDDAHVFCTKEQMFN-ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
              +R R F   + H     E     E L+I      +Y+      ++    T  EK  G
Sbjct: 234 QPFLRTREFLWQEGHTAHLTEAAAREEVLQILQHYAHVYEQLLAIPVIRGQKTDKEKFAG 293

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
                                                 Y    E  +  A GR  Q GT 
Sbjct: 294 G------------------------------------LYTTTVEGYIP-ATGRGIQGGTS 316

Query: 497 Q-VDFNLPSRFNAFYVNSHS---EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
             +  N    F     +  S   EK  P+ + +  +G   R IG+M+     N  L L P
Sbjct: 317 HGLGQNFSKMFGITVEDPTSKPDEKKPPLHVWQNSWGLSTRTIGVMVMVHSDNRGLVLPP 376

Query: 553 ----IQAIVTTIT----------SSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIRE 597
               +Q ++  +           +S       +A++L++  + +E D R   +  +K  +
Sbjct: 377 RVADVQTVIVPVGLTAKTPDDVRASINAEIDHLASVLEAAGIRVEIDKREGYSPGWKFND 436

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRF---GSTTTQKVSLLD---AIPILTKESLPPDC 650
             +K IP+ +  G  E+S   +   R    G      + + +   A+P L  E++  D 
Sbjct: 437 WELKGIPLRLEFGPGESSGGFVTTSRRDIPGKEGKSTIPIAELATAVPALL-ETIQADL 494


>gi|119476901|ref|ZP_01617182.1| prolyl-tRNA synthetase [marine gamma proteobacterium HTCC2143]
 gi|119449708|gb|EAW30945.1| prolyl-tRNA synthetase [marine gamma proteobacterium HTCC2143]
          Length = 576

 Score =  152 bits (383), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 44/221 (19%), Positives = 89/221 (40%), Gaps = 11/221 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  +        ++    H+ + R   +  ++   SG+  W   G ++ + + + +R 
Sbjct: 3   ASQFLIATVKETPSDAVVISHQLMLRAGMIRKLS---SGLYSWLPMGLRVLRKVEAIVRE 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +E+  P V   +LWQ+SG W  Y   +  +     T +   +F L P +    
Sbjct: 60  EMNKAGAQELLMPVVQPSNLWQESGRWQQYGPELLRI-----TDRHNNSFCLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + +KSY++LP+   +  + +R+E      G+MR R F   DA+ F   ++   + 
Sbjct: 115 TDLIRNEIKSYKQLPLNFYQIQTKFRDEIRPRF-GVMRSREFIMKDAYSFHNDQESLQQT 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
            + +H     I+   G     V   T       S      A
Sbjct: 174 YELMHAAYTKIFTRLGLRFRPVVADTGSIGGNASHEFHVLA 214



 Score = 89.8 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 28/166 (16%), Positives = 59/166 (35%), Gaps = 11/166 (6%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
            I R  + G I Q+         A  +N + +    +++     G + R +   IE    
Sbjct: 407 HIKRGIEVGHIFQLGAKYAEALKATVLNENGKDQT-ILMGCYGIG-MTRIVAAAIEQNND 464

Query: 545 N----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                 P  ++P Q  +  +    +    E + ++   L      +  D RNE    K  
Sbjct: 465 EKGIIWPASIAPFQIAIIPLNMQKSVDVAEQSNKLYQQLSELGYEVLLDDRNERPGVKFA 524

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +  +  IP  I+ GD+   +  +  +    +  Q + + + I  + 
Sbjct: 525 DMELIGIPHRIVIGDRGLKDGKMEYKGRQDSENQHIDISNIIDFIA 570


>gi|242238324|ref|YP_002986505.1| prolyl-tRNA synthetase [Dickeya dadantii Ech703]
 gi|242130381|gb|ACS84683.1| prolyl-tRNA synthetase [Dickeya dadantii Ech703]
          Length = 572

 Score =  152 bits (383), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 51/266 (19%), Positives = 100/266 (37%), Gaps = 16/266 (6%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYMLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGLRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E++ P V    LWQ+SG W+ Y   +       D     R F L P +    
Sbjct: 60  EMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGD-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + + SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++     
Sbjct: 115 TDLIRNEISSYKQLPLNFYQIQTKFRDEVRPRF-GIMRAREFLMKDAYSFHTTQESLQIT 173

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG---SDALWDDAENIMKGVLDTIKNSSQD 461
                   S  K F    +  +        +G   S      A +    ++ +  +    
Sbjct: 174 YDAMYAAYS--KIFSRMDLDFRAVQADTGSIGGNASHEFQVLAASGEDDIVFSTGSDYAA 231

Query: 462 RINTGVLLGEGAFY-GPKFEYILKDA 486
            I     +        P  + +L D 
Sbjct: 232 NIELAEAVAPAHNRAAPSQDMLLVDT 257



 Score = 85.6 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/166 (17%), Positives = 54/166 (32%), Gaps = 13/166 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           I R  + G I Q+         A             ++    +G  + R I   IE    
Sbjct: 405 IKRGIEVGHIFQLGTKYSEALKATVQVEDG---RNQVLTMGCYGIGVTRVIAAAIEQNHD 461

Query: 545 N----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                 P  ++P Q  +  +         E A+ I   L++  + +  D R E       
Sbjct: 462 ERGIIWPDAIAPFQVAILPMNMHKSFRVQEVAESIYQQLRAKGIEVLLDDRKERPGVMFA 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +  +  +P  I+ GD+      I  +       + + + D +  LT
Sbjct: 522 DMELIGVPHTIVIGDRNLDNDDIEYKHRRKGEKEMIKVGDIVNFLT 567


>gi|190151185|ref|YP_001969710.1| prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 7
           str. AP76]
 gi|307264534|ref|ZP_07546118.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 13
           str. N273]
 gi|226731421|sp|B3GZ82|SYP_ACTP7 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|189916316|gb|ACE62568.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 7
           str. AP76]
 gi|306870133|gb|EFN01893.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 13
           str. N273]
          Length = 571

 Score =  152 bits (383), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 64/329 (19%), Positives = 117/329 (35%), Gaps = 17/329 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q   +       +++   H+ + R   +  +A   SG+  W   G K+ + + + +R 
Sbjct: 3   TSQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMA---SGLYNWLPTGIKVLKKVENIIRE 59

Query: 286 KIKDD-YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LWQ+SG W+ Y A +             R F L P +    
Sbjct: 60  EMNKGGAIEVLMPVVQPAELWQESGRWNDYGAELLRFVDRGS-----RDFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP+ L +  + +R+E      G+MR R F   DA+ F   +    E 
Sbjct: 115 TDLVRREVSSYKQLPLNLYQIQTKFRDEVRPRF-GVMRSREFVMKDAYSFHVDKASLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++ +  +I+   G +   V+  T       S      A +    V+ + ++     I
Sbjct: 174 YDVMYQVYSNIFTRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVFSTESDFAANI 233

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
                +  G    P  E  L D          +   FNLP       +          ++
Sbjct: 234 ELAEAVAVGERQAPTAEMQLVDT-PNAKTINELVEQFNLPIEKTVKTLIVKGATEEQSLV 292

Query: 524 HRAVFGSIERFIGIMIENFKGNLPLWLSP 552
              + G  E     + E      PL   P
Sbjct: 293 ALVLRGDHE-----LNEIKAQKHPLVADP 316



 Score = 91.8 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 63/168 (37%), Gaps = 14/168 (8%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           I R  + G I Q+         A       +   P+++    +G  + R +   IE +  
Sbjct: 403 IKRGIEVGHIFQLGTKYSEAMKATVQGDDGK---PLVMTMGCYGIGVTRVVAAAIEQHHD 459

Query: 544 GNLPLWL----SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
               +W     +P    +  +    + S  ++++E+   LK+  + +  D R E      
Sbjct: 460 ERGIIWPSDEIAPFTVAIVPMNMHKSESVQQFSEELYRTLKAQGVDVIFDDRKERPGVMF 519

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +  +  +P +++ G+K  +   I  +   +   Q ++    +  L +
Sbjct: 520 ADMELIGVPHMVVIGEKNLANGEIEYKNRRTGEKQMIAKDQLLAFLKE 567


>gi|118401186|ref|XP_001032914.1| prolyl-tRNA synthetase family protein [Tetrahymena thermophila]
 gi|89287259|gb|EAR85251.1| prolyl-tRNA synthetase family protein [Tetrahymena thermophila
           SB210]
          Length = 691

 Score =  152 bits (383), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 85/586 (14%), Positives = 187/586 (31%), Gaps = 74/586 (12%)

Query: 85  VQSIWPEVQVAIGPIIEDGFYYDFDKEQP-FSSDELAQIEKKMQEIIARDSPFLKQYLSH 143
           V+ +   +++   P+I++ FY D         +    ++EK + + +      ++     
Sbjct: 35  VEDMHKYLKLEKAPLIKNLFYQDKKGNYYLVVAKHDTKVEKTLWKQVNLAPGNMRLAADE 94

Query: 144 EKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKV 203
           +    L   +       ++          +  +    +     H        +F +    
Sbjct: 95  KLEAVLKVKRGHVNPFALVNDTEKLVKALIIDEHLKKEEYWAFHPMDNSACVEFKQTEF- 153

Query: 204 AGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLA----REMDL---- 255
              +        +  R+  +    ++   Q      + E+  H KL     ++ DL    
Sbjct: 154 -QKFIDAIGRTFVHVRLDLSEEEEKKLAEQAKKETAKVEEAGHTKLGIDVKKDQDLSEWY 212

Query: 256 --------FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ-VLDQHLW 305
                        D SG        + I++ +  +    IK  D +    P  V D+ L 
Sbjct: 213 KQVITKSEMIEYYDISGCYILRPHAYAIWEIIQRFFDDIIKGFDVQNAYFPMFVTDKALN 272

Query: 306 QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEF 365
           ++  H + +   +  V  +  T       A++P +       ++  +KS+R+LP++L ++
Sbjct: 273 KEKEHVEGFSPEVAWVTRSGSTDLP-EPIAVRPTSETIMYPAYSKWIKSHRDLPLKLNQW 331

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
            +V R E        +R R F   + H     +    E   +         +        
Sbjct: 332 TNVVRWEFKDPT-PFIRTREFLWQEGHTAHATDAEATEFTFLIQDQYRRVYE-------- 382

Query: 426 KLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKD 485
                                      + +       + +      GA++    E  +  
Sbjct: 383 ---------------------------ELLAVPVIKGVKSENEKFPGAYFSSTIETCIP- 414

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           A GR  Q  T   +  N    F+  +++   +K +    ++  +G   R IG+MI     
Sbjct: 415 ANGRAVQAATSHHLGQNFSKMFDISFLDGEKKKQYA---YQTSWGLTTRTIGVMILYHGD 471

Query: 545 NLPLWLSP----IQAIVTTI------TSSAVEYAQEIANLLKSHHLSIETDFRNE-TINY 593
           +  L L P     Q ++  I          +  A E+   LK   + ++ D R+  T  +
Sbjct: 472 DKGLVLPPLVASTQVVIVPIIKTGADNERVLNKAHELKAELKKAGIRVQVDDRDNYTSGW 531

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
           K     +K IP+    G  +  +  I      ++  + +     I 
Sbjct: 532 KFNHWEVKGIPLRFEIGQMDMDKNQITAVWRVNSHKEAIPNESIIE 577


>gi|71653235|ref|XP_815258.1| prolyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener]
 gi|70880301|gb|EAN93407.1| prolyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 810

 Score =  152 bits (383), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 77/431 (17%), Positives = 161/431 (37%), Gaps = 63/431 (14%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
             EE+  + + ++  + ++     D SG        + I+  +  +   +I+    E+  
Sbjct: 306 KREENFPQWYVEVITKAEMIEY-YDVSGCYIIRPWAFFIWSRIQKFFGARIERMGIEDCY 364

Query: 296 TPQ-VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
            P  V    L ++  H + +   +  V  A +T  ++   A++P +       +   ++S
Sbjct: 365 FPMFVSKSCLEREKDHVEGFAPEVAWVTKAGETDLEV-PVAIRPTSETVMYPYYAKWIRS 423

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIIS 413
           +R+LPVRL  + +V R E S      +R R F   + H  + T+E+   E L+I +   +
Sbjct: 424 HRDLPVRLNMWNNVIRWEFSHPT-PFIRTREFLWQEGHCAWQTEEECSQEVLEILDHYAA 482

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           +Y++     ++    T  EK  G                                     
Sbjct: 483 VYEELLAVPVVKGRKTEKEKFAGG------------------------------------ 506

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
           +Y    E  +  AIGR  Q GT   +  N    FN  + +        ++  +  +G   
Sbjct: 507 YYTTTVETYI-AAIGRGCQGGTSHNLGQNFGKMFNISFQDPEKNDGSTLIPWQNSWGLST 565

Query: 533 RFIGIMIENFKGNLPLWLSP----IQAIVTTIT----------SSAVEYAQEIANLLKSH 578
           R IG+M      +  + L P    +Q ++  +            S +E  + +  +L S 
Sbjct: 566 RVIGVMTMVHGDDSGIVLPPRVASVQVVIIPVGITKNTTDKERKSLLEGCKTLEKVLVSG 625

Query: 579 HLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV----S 633
            +  + D R+  +  ++     +K +P+ +  G +E +   I +      + + +     
Sbjct: 626 GIRAKADLRDNYSPGWRFNHWEVKGVPVRVELGPRELASLKISLVLRHDGSRRSLLWDKE 685

Query: 634 LLDAIPILTKE 644
           L  A+ +L  E
Sbjct: 686 LPTAMTLLMDE 696


>gi|291616370|ref|YP_003519112.1| ProS [Pantoea ananatis LMG 20103]
 gi|291151400|gb|ADD75984.1| ProS [Pantoea ananatis LMG 20103]
          Length = 572

 Score =  152 bits (383), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 66/330 (20%), Positives = 121/330 (36%), Gaps = 17/330 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            TQ  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TTQYLLSTQKETPSDAEVISHQLMLRAGMIRKLA---SGLYTWLPTGLRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    EI+ P V    LWQ+SG W+ Y   +  V       +  R F L P +    
Sbjct: 60  EMNNAGAIEISMPVVQPADLWQESGRWEQYGPELLRV-----ADRHERPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+ L +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLIRNELSSYKQLPLNLYQIQTKFRDEVRPRF-GVMRSREFIMKDAYSFHTSQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   G +   V+  T       S      A++    V+ +  +     I
Sbjct: 174 YDAMYRAYSQIFNRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVIFSTASDFAANI 233

Query: 464 NTGVLLGEGAFY-GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
                +        P  E    D          +        +     +   +E+    +
Sbjct: 234 EFAEAVAPAGDRPAPAEEMREVDTPNTKTIAELVSQFQQPIEKTVKTLMVKGAEESGHAL 293

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
           +   V G  E     + E      PL  SP
Sbjct: 294 VALLVRGDHE-----LNEIKAEKSPLVASP 318



 Score = 84.1 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 57/167 (34%), Gaps = 13/167 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           I R  + G I Q+         A             ++    +G  I R +   IE    
Sbjct: 405 IKRGIEVGHIFQLGTKYSEAMKASVQGEDG---RNQIMTMGCYGIGITRVVAAAIEQNHD 461

Query: 545 N----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +     P  L+P +  +  +         E A+E+ N L++  + +  D R E       
Sbjct: 462 DRGIIWPAALAPFEVAILPMNMQKSFRVKELAEELYNTLRAKGVEVILDDRKERPGVMFA 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  +  +P  I+ GD+    + I  +   +   Q +   + +  L  
Sbjct: 522 DMELIGVPHTIVIGDRNLDNQEIEYKARRAGEKQMIKQDEIVEFLLN 568


>gi|241664234|ref|YP_002982594.1| prolyl-tRNA synthetase [Ralstonia pickettii 12D]
 gi|240866261|gb|ACS63922.1| prolyl-tRNA synthetase [Ralstonia pickettii 12D]
          Length = 574

 Score =  152 bits (383), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 57/301 (18%), Positives = 114/301 (37%), Gaps = 13/301 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       ++E   H+ + R   +  +   G+G+  +   G ++ + +   +R 
Sbjct: 3   ASQFFISTLKEAPADAEIVSHKLMMRAGMIKKL---GAGLYTYMPVGLRVIRKVEQIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LWQ++G WD     +   K      +  R F ++P +    
Sbjct: 60  EMNAAGAVEVLMPVVQPGELWQETGRWDKMGDELLRFKD-----RHERDFVMQPTSEEVV 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
             +    ++SY++LPV   +  + +R+E      G+MR R FT  DA+ F    E +   
Sbjct: 115 TDIARTEIRSYKQLPVNFYQIQTKFRDERRPRF-GIMRGREFTMKDAYSFDRDAEGLKLS 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             K+++    I++ FG E   V          GS      A+     ++    +     I
Sbjct: 174 YQKMYDAYTRIFQRFGLEFRAVAADNGAIGGSGSHEFHVIADTGEDAIIYCPDSDYAANI 233

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI--QVDFNLPSRFNAFYVNSHSEKCHPV 521
                +   A  G   E + K       +C  +  Q+   L     +  + +  E   P 
Sbjct: 234 EAAEAVAPAAPRGAATEALTKTHTPGRSKCEAVAEQLGIPLQRTIKSIVLATEVEGGEPQ 293

Query: 522 M 522
           +
Sbjct: 294 I 294



 Score = 89.5 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 69/198 (34%), Gaps = 19/198 (9%)

Query: 462 RINTGVLLGEGAFYGPKFEY---ILKDAIGRDWQCGTIQVDFN------LPSRFNAFYVN 512
            +N G  L E   Y  +         D  G    C  I+V              NA +++
Sbjct: 374 GVNWGRDLPEPEVYDLRNVVAGDPSPDGKGTLAVCRGIEVGHVFMLGTRYSEAMNATFLD 433

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTI----TSSA 564
            +  K  P+++     G I R +G  IE          P  ++P Q ++  +    +++ 
Sbjct: 434 ENG-KTQPMVMGCYGIG-ITRILGAAIEQNYDARGIIWPASIAPFQVVICPVGYDRSNAV 491

Query: 565 VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRF 624
            E A  +   L +  + +  D R E       +  +  +P  ++ GD+   E  +  +  
Sbjct: 492 REEADRLHAELVAAGIDVMLDDRGERPGAMFADWELIGVPFRVVVGDRGLKEGKLEFQGR 551

Query: 625 GSTTTQKVSLLDAIPILT 642
                  V+  D +  L 
Sbjct: 552 RDEAATAVAPADVLATLK 569


>gi|53680543|gb|AAU89472.1| theronyl tRNA synthatase-like protein [Aedes aegypti]
          Length = 301

 Score =  152 bits (383), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 52/206 (25%), Positives = 92/206 (44%), Gaps = 21/206 (10%)

Query: 3   SDIKLTFPDGS-IKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIE 60
           + IK+T PDG  +      +T  DVA+ IS  LA   V   +N ++ DL  P+  +  ++
Sbjct: 54  NPIKVTLPDGKEVDATSWESTPYDVAKGISXGLADNTVIARVNNELWDLDRPLEGDCKLQ 113

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQP-FSSDEL 119
           ++  +DP + AV  HS AHI+ EA++  +    +  GP IE+GFYYD   E    S+ + 
Sbjct: 114 LLKFDDPDAQAVFWHSSAHILGEAMEKRYGGH-LCYGPPIENGFYYDMFLEGSGISNQDY 172

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR---- 175
             +E ++++I+   +    + + +EK+  L +  +   K  +   +        Y+    
Sbjct: 173 GALESEVKKIVKDKTTI--RTVGNEKSPILLKMFELPMKFRVAVFLKRGRFTNRYQQTVL 230

Query: 176 ---------QGEWFDLCRGPHVRSTG 192
                     G W     GP      
Sbjct: 231 SLVGPLDSICGPW--NLHGPPTPWAK 254


>gi|307257929|ref|ZP_07539683.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 10
           str. D13039]
 gi|306863576|gb|EFM95505.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 10
           str. D13039]
          Length = 571

 Score =  152 bits (383), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 64/329 (19%), Positives = 117/329 (35%), Gaps = 17/329 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q   +       +++   H+ + R   +  +A   SG+  W   G K+ + + + +R 
Sbjct: 3   TSQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMA---SGLYNWLPTGIKVLKKVENIIRE 59

Query: 286 KIKDD-YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LWQ+SG W+ Y A +             R F L P +    
Sbjct: 60  EMNKGGAIEVLMPVVQPAELWQESGRWNDYGAELLRFVDRGS-----RDFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP+ L +  + +R+E      G+MR R F   DA+ F   +    E 
Sbjct: 115 TDLVRREVSSYKQLPLNLYQIQTKFRDEVRPRF-GVMRSREFVMKDAYSFHVDKASLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++ +  +I+   G +   V+  T       S      A +    V+ + ++     I
Sbjct: 174 YDVMYQVYSNIFTRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVFSTESDFAANI 233

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
                +  G    P  E  L D          +   FNLP       +          ++
Sbjct: 234 ELAEAVAVGERQAPTAEMQLVDT-PNAKTINELVEQFNLPIEKTVKTLIVKGATEEQPLV 292

Query: 524 HRAVFGSIERFIGIMIENFKGNLPLWLSP 552
              + G  E     + E      PL   P
Sbjct: 293 ALVLRGDHE-----LNEIKAQKHPLVADP 316



 Score = 92.9 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 63/168 (37%), Gaps = 14/168 (8%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           I R  + G I Q+         A       +   P+++    +G  + R +   IE +  
Sbjct: 403 IKRGIEVGHIFQLGTKYSEAMKATVQGEDGK---PLVMTMGCYGIGVTRVVAAAIEQHHD 459

Query: 544 GNLPLWL----SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
               +W     +P    +  +    + S  ++++E+   LK+  + +  D R E      
Sbjct: 460 DRGIIWPSDEIAPFTVAIVPMNMHKSESVQQFSEELYRTLKAQGVDVIFDDRKERPGVMF 519

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +  +  +P +++ G+K  +   I  +   +   Q ++    +  L +
Sbjct: 520 ADMELIGVPHMVVIGEKNLANGEIEYKNRRTGEKQMIAKDQLLAFLKE 567


>gi|219128900|ref|XP_002184639.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217403748|gb|EEC43698.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 479

 Score =  152 bits (383), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 76/399 (19%), Positives = 141/399 (35%), Gaps = 57/399 (14%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH-LWQQSGHWDSYRAN 317
            D SG        +K+++ +  +   KI+D   E    P  + Q  L ++  H + +   
Sbjct: 5   YDISGCYILRPWSYKMWELIQVWFNAKIEDMGVENAYFPLFVSQDRLEKEKDHVEGFAPE 64

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           +  V  + +     R  A++P +       ++  +KS+R+LP++L ++ +V R E     
Sbjct: 65  VAWVTRSGEGDL-ARPIAVRPTSETIMYPAYSDWIKSHRDLPLKLNQWSNVVRWEFKYPT 123

Query: 378 HGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
              +R R F   + H    T E      ++   L   +Y+D     ++    T  EK  G
Sbjct: 124 -PFLRTREFLWQEGHTAHATFEDADATVMEALELYRGVYEDLLAVPVVPGYKTEKEKFAG 182

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
                                                F     E  +    GR  Q  T 
Sbjct: 183 G------------------------------------FRTTTVEAYI-AGSGRAIQGATS 205

Query: 497 QVDFNLPSRF-NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL----S 551
               NL   F   F ++  +EK    +  +  +G   R IG+M+     +  L L    +
Sbjct: 206 H---NLGQNFGKMFEISFQNEKGESQIPWQTSWGLTTRTIGVMVMVHGDDTGLVLPPRVA 262

Query: 552 PIQAIVTTITSS------AVEYAQEIANLLKSHHLSIETDFRN-ETINYKIREHSIKKIP 604
           P+Q ++  I S       A  Y   I   LK   L  + D R+     +K      K +P
Sbjct: 263 PLQVVIVPIISKKLTPEQADPYCLSILADLKKAGLRAKYDDRSAYNPGWKYNHWEQKGVP 322

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           + I  G ++  ++S  +    ++  +   +     +L  
Sbjct: 323 VRIEVGPRDIEQKSARVVVRHNSDKEDHPVEGLGSLLRN 361


>gi|196001647|ref|XP_002110691.1| hypothetical protein TRIADDRAFT_54976 [Trichoplax adhaerens]
 gi|190586642|gb|EDV26695.1| hypothetical protein TRIADDRAFT_54976 [Trichoplax adhaerens]
          Length = 1241

 Score =  152 bits (383), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 72/456 (15%), Positives = 152/456 (33%), Gaps = 63/456 (13%)

Query: 207  YWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVI 266
                      L          +          EE+    + +   + ++     D SG  
Sbjct: 816  QEARKEENAGLQDERNNPERKKVSRLGLEIAKEENLGEWYSQAITKAEMIEYH-DVSGCY 874

Query: 267  FWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ-VLDQHLWQQSGHWDSYRANMFAVKCA 324
                  + I++ +  +   +IK    + +  P  V    L ++  H   +   +  V  +
Sbjct: 875  ILRPWSYAIWEYIKDFFDAEIKKLGVKNVYFPIFVSKAALEREKTHISDFAPEVAWVTKS 934

Query: 325  DDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVR 384
             DT       A++P +       +   +KS+R+LP++L ++ +V R E        +R R
Sbjct: 935  GDTEL-AEPIAIRPTSETVMYPSYAKWIKSHRDLPLKLNQWNNVVRWEFK-HPQPFIRTR 992

Query: 385  GFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDD 443
             F   + H  F +K++   E   I  L   IY++     ++    T  EK  G D     
Sbjct: 993  EFLWQEGHSAFVSKKEAEEEVFTILELYRRIYEELLAIPVVKGRKTEKEKFAGGD----- 1047

Query: 444  AENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI-QVDFNL 502
                                           +    E    DA GR  Q  T   +  N 
Sbjct: 1048 -------------------------------FTTTVE-AFIDANGRGAQGATSHHLGQNF 1075

Query: 503  PSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVT 558
               F   Y +  +++     +++  +G   R +G++     +N    +P  ++ IQ I+ 
Sbjct: 1076 SKMFEIVYEHPETKEK--AFVYQNSWGISTRTLGVLCLVHGDNKGLIIPPKVADIQVIII 1133

Query: 559  TIT----------SSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIII 607
                         +   +       +LK   +  + D R+  +  +K   + +K +P+ +
Sbjct: 1134 PCGISANLSEDERNKIYDSCSSYVKILKDGGIRADCDTRDNYSAGWKFNHYELKGVPLRM 1193

Query: 608  ICGDKEASERS-IGIRRFGSTTTQKVSLLDAIPILT 642
              G K+      + +R   +      +  +A+  + 
Sbjct: 1194 ELGPKDIKNNQFVTVR-RDNAQKSSSNADNAVEHIK 1228


>gi|167765976|ref|ZP_02438029.1| hypothetical protein CLOSS21_00467 [Clostridium sp. SS2/1]
 gi|167712333|gb|EDS22912.1| hypothetical protein CLOSS21_00467 [Clostridium sp. SS2/1]
 gi|291558770|emb|CBL37570.1| prolyl-tRNA synthetase, family I [butyrate-producing bacterium
           SSC/2]
          Length = 478

 Score =  152 bits (383), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 73/426 (17%), Positives = 157/426 (36%), Gaps = 59/426 (13%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEE-INT 296
           +E+   + +  + ++ +L   +    G +     G+ I++ +   +  K K+   E +  
Sbjct: 14  MEDDFAQWYTDVVKKAELADYSSVR-GCMILRPNGYAIWENIQKVLDAKFKETGVENVAM 72

Query: 297 PQVLDQHL-WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P  + + L  ++  H + +   +  V    D     R   ++P +       ++  ++S+
Sbjct: 73  PMFIPESLLKKEEDHVEGFAPEVAWVTHGGDKELQER-LCVRPTSETLFCDFYSKIIQSH 131

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA-HVFCTKEQMFNECLKIHNLIISI 414
           R+LP    ++ SV R E   +    +R   F   +      T+E+     +++ N+    
Sbjct: 132 RDLPKLYNQWVSVVRWEK--TTRPFLRTSEFFWQEGHTAHATEEEAEARTVQMLNMYADF 189

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            + +    ++    T  EK  G                                    A 
Sbjct: 190 CEQYLAIPVVKGQKTEKEKFAG------------------------------------AH 213

Query: 475 YGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
                E ++ D  G+  Q GT           F+  Y +  ++  +   +H+  +G   R
Sbjct: 214 STYTIEALMHD--GKALQSGTSHNFGDGFAKAFDIQYTDKDNKLQY---VHQTSWGMSTR 268

Query: 534 FIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDF 586
            IG +I    ++    LP  ++P+Q ++  I       ++ A+EI   L S    ++ D 
Sbjct: 269 IIGAIIMVHGDDSGLVLPPRIAPVQTMIVPIMQKKEGVLDKAEEIRKRLVSS-YKVKVDD 327

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK--E 644
            +++  +K  E  ++ IP  I  G K+  +    I R  +     VSL +    L +  E
Sbjct: 328 SDKSPGWKFSEQEVRGIPTRIEIGPKDIEKNQAVIVRRDTREKIIVSLDEIETKLGEVLE 387

Query: 645 SLPPDC 650
            +  D 
Sbjct: 388 QMQNDM 393


>gi|45387545|ref|NP_991118.1| probable prolyl-tRNA synthetase, mitochondrial [Danio rerio]
 gi|41350986|gb|AAH65673.1| Prolyl-tRNA synthetase (mitochondrial) [Danio rerio]
          Length = 477

 Score =  152 bits (383), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 67/372 (18%), Positives = 129/372 (34%), Gaps = 30/372 (8%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I     G  ++     +  + L+  +  ++     ++++ P +    LW++SG W+    
Sbjct: 81  IHPSNPGCFYYLPVALRSLEKLVRLIDEEMHAIGGQKVDMPALCSAELWKKSGRWELMGK 140

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPSG 375
            MF +    +       + L P +      +F      SY++LP+ L +    +R+E   
Sbjct: 141 EMFRLLDRHNG-----EYCLGPTHEEAVTELFASQTTMSYKKLPLLLYQVTRKFRDEQKP 195

Query: 376 SLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              GL+R R F   D + F   +E   +    +      I      + + V+  T     
Sbjct: 196 KF-GLLRGREFYMKDMYSFDINEEAALHTYNSVCQAYRRILDRLHLKWVQVQADTGNIGG 254

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
             S      A +I +  L    N         +  G+      + +              
Sbjct: 255 TLSHEFQLPA-DIGEDKLLVCGNCGFSANIETMEPGQAK--CSQCQTGKLTESRGIEVGH 311

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG-SIERFIGIMIE----NFKGNLPLW 549
           T  +       F A +VN+ +    P +     FG  + R +   IE        + P  
Sbjct: 312 TFYLGTKYSQAFKALFVNASNV---PAVAEMGCFGLGVTRILAASIEVMSTEDAIHWPGL 368

Query: 550 LSPIQAIVTT---------ITSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHS 599
           ++P Q  V            T  A E AQ + N L +    +  D R + TI  ++++  
Sbjct: 369 IAPYQVCVLPPKKGSKAHEATQKAEELAQSLGNSLPNLRGEVVLDDRTQMTIGKRLKDAK 428

Query: 600 IKKIPIIIICGD 611
           I   P +++ G 
Sbjct: 429 ILGYPFVVVVGQ 440


>gi|283783983|ref|YP_003363848.1| prolyl-tRNA synthetase [Citrobacter rodentium ICC168]
 gi|282947437|emb|CBG86984.1| prolyl-tRNA synthetase [Citrobacter rodentium ICC168]
          Length = 572

 Score =  152 bits (383), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 51/250 (20%), Positives = 100/250 (40%), Gaps = 11/250 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGLRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E++ P V    LWQ+SG W+ Y   +       +     R F L P +    
Sbjct: 60  EMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGE-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLVRNELSSYKQLPLNFFQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHTSQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   G E   V+  T       S      A++    ++ +  +     I
Sbjct: 174 YDAMYAAYSKIFTRIGLEFRAVQADTGSIGGSASHEFQVLAQSGEDDIIFSDTSDYAANI 233

Query: 464 NTGVLLGEGA 473
                +   A
Sbjct: 234 ELAEAVAPKA 243



 Score = 84.4 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 56/177 (31%), Gaps = 13/177 (7%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
           P  +      I R  + G I Q+         A             ++    +G  + R 
Sbjct: 395 PSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKAAVQGEDG---RNQILTMGCYGIGVTRV 451

Query: 535 IGIMIENFKGN----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDF 586
           +   IE          P  ++P Q  +  +         E A+++   L++  + +  D 
Sbjct: 452 VAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSYRVQELAEKLYAELRAQGIEVLLDD 511

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           R E       +  +  IP  I+ GD+      I  +   +   Q +   D +  L  
Sbjct: 512 RKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVSFLVN 568


>gi|213403478|ref|XP_002172511.1| cytoplasmic proline-tRNA ligase Prs1 [Schizosaccharomyces japonicus
           yFS275]
 gi|212000558|gb|EEB06218.1| cytoplasmic proline-tRNA ligase Prs1 [Schizosaccharomyces japonicus
           yFS275]
          Length = 711

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 80/427 (18%), Positives = 145/427 (33%), Gaps = 81/427 (18%)

Query: 249 LAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-----DDYEEINTPQVLDQH 303
           +    D+           F       I++ +  +   +IK     + Y       V  + 
Sbjct: 224 MIEYYDISGCYILKPWSYF-------IWEVIQKWFDTEIKKIGVKNGY---FPLFVSSRV 273

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           L ++  H + +   +  V  A  +  +    A++P +       +   ++S+R+LP+RL 
Sbjct: 274 LEKEKDHVEGFAPEVAWVTRAGSSDLE-EPIAIRPTSETVMYPYYAKWIRSHRDLPLRLN 332

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           ++ SV R E        +R R F   + H  F TKE+   E   I +L   +Y D     
Sbjct: 333 QWNSVVRWEFKNP-QPFLRTREFLWQEGHTAFLTKEEADKEVHYILDLYSRVYSDL---- 387

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
                                           +       + +      G  Y    E  
Sbjct: 388 --------------------------------LALPVVKGVKSENEKFAGGLYTTTCEGY 415

Query: 483 LKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSE---KCHP-VMIHRAVFGSIERFIGI 537
           +    GR  Q  T   +  N    FN    +  +E      P   I +  +G   R IG+
Sbjct: 416 IPTT-GRGIQGATSHGLGQNFSKMFNIAVEDPDAELVNGERPKRYIWQNSWGLSTRTIGV 474

Query: 538 MI----ENFKGNLPLWLSPIQAIVTT--ITSSAVE--------YAQEIANLLKSHHLSIE 583
            +    ++    LP  ++ IQAIV    IT+   +          ++IA+ L +  +  E
Sbjct: 475 AVMVHGDDKGLKLPPAVASIQAIVVPCGITNKTTDAQRAELENKCKQIADSLVAGEVRAE 534

Query: 584 TDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL-------D 636
            D R+ T  YK     +K +P+ I  G  +A +  +   R  +     + L        D
Sbjct: 535 VDLRSYTPGYKFAHWELKGVPLRIEYGPNDAKKEQVTAVRRDTFEKIAIPLANLANGVQD 594

Query: 637 AIPILTK 643
            +  + K
Sbjct: 595 VLAAIQK 601


>gi|169794838|ref|YP_001712631.1| prolyl-tRNA synthetase [Acinetobacter baumannii AYE]
 gi|213157835|ref|YP_002320633.1| prolyl-tRNA synthetase [Acinetobacter baumannii AB0057]
 gi|215482385|ref|YP_002324567.1| prolyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
 gi|301345755|ref|ZP_07226496.1| prolyl-tRNA synthetase [Acinetobacter baumannii AB056]
 gi|301511535|ref|ZP_07236772.1| prolyl-tRNA synthetase [Acinetobacter baumannii AB058]
 gi|301594855|ref|ZP_07239863.1| prolyl-tRNA synthetase [Acinetobacter baumannii AB059]
 gi|332852292|ref|ZP_08434097.1| proline--tRNA ligase [Acinetobacter baumannii 6013150]
 gi|332870515|ref|ZP_08439279.1| proline--tRNA ligase [Acinetobacter baumannii 6013113]
 gi|226695840|sp|B7GWV6|SYP_ACIB3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226695841|sp|B7I854|SYP_ACIB5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226731418|sp|B0V4Y6|SYP_ACIBY RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|169147765|emb|CAM85628.1| prolyl-tRNA synthetase [Acinetobacter baumannii AYE]
 gi|213056995|gb|ACJ41897.1| prolyl-tRNA synthetase [Acinetobacter baumannii AB0057]
 gi|213986493|gb|ACJ56792.1| prolyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
 gi|332729422|gb|EGJ60762.1| proline--tRNA ligase [Acinetobacter baumannii 6013150]
 gi|332732252|gb|EGJ63520.1| proline--tRNA ligase [Acinetobacter baumannii 6013113]
          Length = 571

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 74/427 (17%), Positives = 148/427 (34%), Gaps = 47/427 (11%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++           ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   ASRFLFATLRETPNDAEVISHQLMLRAGMIRKLA---SGLYTWLPMGTRVLKKVDAIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P      LW++SG ++ Y   +   K   D       F L P +    
Sbjct: 60  EMNRSGAMEVFMPVTQPASLWEESGRYEQYGPELLRFKDRHDNP-----FVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + LKSY++LPV   +  + +R+E      G+MR R F   DA+ F   ++   E 
Sbjct: 115 TDLARNELKSYKQLPVNFYQIQTKFRDEIRPRF-GVMRSREFIMKDAYSFHATQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +++    I+   G +   V+  T       S      A +    +  + ++     +
Sbjct: 174 YDVMYDTYSRIFTRLGLDFRPVQADTGSIGGSASHEFHVLAASGEDDIAFSTESDYAANV 233

Query: 464 N--TGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF--NAFYVNSHSEKCH 519
                VL+GE A   P  E+ L +   +       Q     P +            EK +
Sbjct: 234 EMAEAVLVGERA--APTQEFKLVETPNQKTIADVCQFLNADPKQSVKALLVQGVADEKGN 291

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP------IQAIVTTITSSAVEYAQEIAN 573
             ++   + G  E     + E      PL  +P       Q     +T+           
Sbjct: 292 VPVVALFLRGDHE-----LNEIKAEKHPLVAAPLAFATEEQLQAFGLTAGFTGP-----Q 341

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR-RFGSTTTQKV 632
            L    +++  D     ++               + G  EA + +IG+     +  T+  
Sbjct: 342 GLVEKGITVIVDRAASVLSD-------------FVAGANEADKHAIGVNWERDAQITEVF 388

Query: 633 SLLDAIP 639
            L + + 
Sbjct: 389 DLRNVVE 395



 Score = 89.5 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 59/167 (35%), Gaps = 13/167 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           I R  + G I Q+            +    +   P  +    +G  + R +   IE N+ 
Sbjct: 408 IKRGIEVGHIFQLGTKYSEALGCKVLGEDGK---PFTVTMGCYGIGVTRVVAAAIEQNYD 464

Query: 544 GNLPLWL---SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
               +W    +P +  +  +    +   +E A+ +   L++    +  D RNE    K  
Sbjct: 465 DKGIIWPQAIAPFEIAIVPMNAHKSPRTLEAAEALYAELQAQGFDVLLDDRNERPGVKFS 524

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  +  IP  I+ G+K     +   +         ++  + +  L +
Sbjct: 525 DLELMGIPHRIVIGEKGLDAGTFEYKGRRDAEASNLTKEELLAKLAR 571


>gi|307251435|ref|ZP_07533349.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 4
           str. M62]
 gi|306856519|gb|EFM88661.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 4
           str. M62]
          Length = 571

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 64/329 (19%), Positives = 117/329 (35%), Gaps = 17/329 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q   +       +++   H+ + R   +  +A   SG+  W   G K+ + + + +R 
Sbjct: 3   TSQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMA---SGLYNWLPTGIKVLKKVENIIRE 59

Query: 286 KIKDD-YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LWQ+SG W+ Y A +             R F L P +    
Sbjct: 60  EMNKGGAIEVLMPVVQPAELWQESGRWNDYGAELLRFVDRGS-----RDFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP+ L +  + +R+E      G+MR R F   DA+ F   +    E 
Sbjct: 115 TDLVRREVSSYKQLPLNLYQIQTKFRDEVRPRF-GVMRSREFVMKDAYSFHVDKASLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++ +  +I+   G +   V+  T       S      A +    V+ + ++     I
Sbjct: 174 YDVMYQVYSNIFTRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVFSTESDFAANI 233

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
                +  G    P  E  L D          +   FNLP       +          ++
Sbjct: 234 ELAEAVAVGERQAPTAEMQLVDT-PNAKTINELVEQFNLPIEKTVKTLIVKGATEEQPLV 292

Query: 524 HRAVFGSIERFIGIMIENFKGNLPLWLSP 552
              + G  E     + E      PL   P
Sbjct: 293 ALVLRGDHE-----LNEIKAQKHPLVADP 316



 Score = 90.2 bits (222), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 63/168 (37%), Gaps = 14/168 (8%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           I R  + G I Q+         A       +   P+++    +G  + R +   IE +  
Sbjct: 403 IKRGIEVGHIFQLGTKYSEAMKATVQGEDGK---PLVMTMGCYGIGVTRVVAAAIEQHHD 459

Query: 544 GNLPLWL----SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
               +W     +P    +  +    + S  ++++E+   LK+  + +  D R E      
Sbjct: 460 DRGIIWPSDEIAPFTVAIVPMNMHKSESVQQFSEELYRTLKAQDVDVIFDDRKERPGVMF 519

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +  +  +P +++ G+K  +   I  +   +   Q ++    +  L +
Sbjct: 520 ADMELIGVPHMVVIGEKNLANGEIEYKNRRTGEKQMIAKDQLLAFLKE 567


>gi|146084142|ref|XP_001464936.1| bifunctional aminoacyl-trna synthetase [Leishmania infantum JPCM5]
 gi|134069031|emb|CAM67175.1| putative bifunctional aminoacyl-tRNA synthetase [Leishmania
           infantum JPCM5]
          Length = 810

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 77/408 (18%), Positives = 154/408 (37%), Gaps = 63/408 (15%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRAN 317
            D SG        + +++ +  ++  KI+    E+   P  + ++  + +  H + +   
Sbjct: 328 YDVSGCYIIRPWAYYVWKCVQRFLGGKIEKLGVEDCYFPMFVSRNCLEREKDHIEGFAPE 387

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           +  V  A DT  + +  A++P +       +   ++S+R+LPVRL  + +V R E S   
Sbjct: 388 VAWVTRAGDTELE-QPVAVRPTSETVMYPYYAKWIRSHRDLPVRLNMWNNVIRWEFSHPT 446

Query: 378 HGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
              +R R F   + H  +   E+   E L I     S+Y+      ++    T  EK  G
Sbjct: 447 -PFIRTREFLWQEGHCAWAKAEECAKEVLDILECYASVYEQLLAVPVVRGRKTEKEKFAG 505

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
            D                                    Y    E  ++ A+GR  Q  T 
Sbjct: 506 GD------------------------------------YTTTVETFIE-AVGRGCQGATS 528

Query: 497 Q-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLS 551
             +  N    F+  + +  + +   ++  +  +G   R IG+MI    +N    +P  ++
Sbjct: 529 HNLGQNFGKMFDIRFQDPENNEQT-LIPWQNSWGLSTRVIGVMIMVHGDNRGMVMPPRVA 587

Query: 552 PIQAIVTT--ITSSAVEYAQE--------IANLLKSHHLSIETDFRNE-TINYKIREHSI 600
             Q I+    IT    E A++        + + L    +  + D R+  +  ++     +
Sbjct: 588 STQVIIIPVGITKDTTEEARQELLASCRRLESELCEGGVRAKCDLRDNYSPGWRFNHWEV 647

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD----AIPILTKE 644
           K +P+ +  G +E +ERS+ +    S     V        A+  L ++
Sbjct: 648 KGVPLRVELGPRELAERSLAVAVRHSGARHSVVWDAQTPTAVAALLED 695


>gi|110833600|ref|YP_692459.1| prolyl-tRNA synthetase [Alcanivorax borkumensis SK2]
 gi|110646711|emb|CAL16187.1| Prolyl-tRNA synthetase [Alcanivorax borkumensis SK2]
          Length = 566

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 44/230 (19%), Positives = 87/230 (37%), Gaps = 11/230 (4%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
             H+ + R   +  +A   SG+  W   G ++ + +   +R ++     +E+  P V   
Sbjct: 15  TSHQLMLRAGMVRKLA---SGLYTWLPSGLRVLRKVEQVIREEMDRAGAQEVLMPVVQPM 71

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SG   +Y   +  +    +       F L P +      +  + L SY++LP   
Sbjct: 72  ELWEESGRAPAYGPELLRITDRHNNP-----FCLGPTHEEVITDMVRNELHSYKQLPANF 126

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDFGFE 421
            +  + +R+E      G+MR R F   DA+ F T      +  + +H    +I+   G +
Sbjct: 127 YQIQTKFRDEIRPRF-GIMRSREFIMKDAYSFHTNMDSLADTYQIMHRAYCAIFDRLGLD 185

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
              V+  T       S      AE+    +  +  +     +     L  
Sbjct: 186 YRPVEADTGAIGGAASHEFHVLAESGEDDIAFSDGSDYAANVELAEALAP 235



 Score = 80.6 bits (197), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 26/169 (15%), Positives = 64/169 (37%), Gaps = 14/169 (8%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFK 543
            I R  + G I Q+         A  ++ + +    V++    +G  + R +   IE   
Sbjct: 396 TIKRGIEVGHIFQLGTKYSEALGATVLDENGKS---VVMPMGCYGIGVTRVVAAAIEQNN 452

Query: 544 GN----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRN-ETINYK 594
            +     P  ++P Q  +  +    +    E A+++   L +  + +  D R  E +  K
Sbjct: 453 DDRGIIWPEAIAPFQVALVPVNIKKSPRERELAEKLYAELTAMGIEVLFDDREKERLGVK 512

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           + +  +  IP  I+  ++      +  +        +V++ + +  L +
Sbjct: 513 LADTELLGIPHRIVIAERGMDNGVLEYKGRRDADKTEVAMDEIVAFLKE 561


>gi|315046950|ref|XP_003172850.1| bifunctional aminoacyl-tRNA synthetase [Arthroderma gypseum CBS
           118893]
 gi|311343236|gb|EFR02439.1| bifunctional aminoacyl-tRNA synthetase [Arthroderma gypseum CBS
           118893]
          Length = 604

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 87/419 (20%), Positives = 160/419 (38%), Gaps = 68/419 (16%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHL-WQQSGHWDSYRAN 317
            D SG        + I++ + S+   KIK  + +  + P  + + +  ++  H + + A 
Sbjct: 113 YDVSGCFVLKPHSFFIWEQIQSWFDAKIKQMNVKNCSFPLFVSEDVLKKEKDHIEGFAAE 172

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           +  V  A ++  + +  A++P +       +   ++S+R+LP++L ++ SV R E     
Sbjct: 173 VAWVTHAGNSALEKK-IAIRPTSETVMYPYYAKWIRSHRDLPLKLNQWNSVVRWEFKNP- 230

Query: 378 HGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
              +R R F   + H    TKE+   E L+I      +Y++     ++    T  EK  G
Sbjct: 231 QPFLRTREFLWQEGHTAHLTKEEAHEEVLQILQHYAHVYEELLAVPVIQGQKTDKEKFAG 290

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
                                                 Y    E  +  A GR  Q GT 
Sbjct: 291 G------------------------------------LYTTTVEGYIP-ATGRGIQGGTS 313

Query: 497 Q-VDFNLPSRFNAFYVNSH---SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
             +  N    F     +      EK  P+ + +  +G   R IG+M+     N  L L P
Sbjct: 314 HGLGQNFSKMFGITVEDPSARPDEKKPPLHVWQNSWGLSTRTIGVMVMIHGDNRGLVLPP 373

Query: 553 ----IQAIVTTITSSA----VEYA------QEIANLLKSHHLSIETDFRNE-TINYKIRE 597
               IQ ++  +   A     E A      + IA +L +  + +E D R+  T  +K  +
Sbjct: 374 RVADIQTVIVPVGLGAKTPDDERAAIMAEIEAIATVLSAAGVRVEVDKRDGYTPGWKFND 433

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRF---GSTTTQKVSLLD---AIPILTKESLPPDC 650
             +K IP+ +  G  E++   +   R    G      +++ D   A+P L  E++  D 
Sbjct: 434 WELKGIPLRLEFGPGESAGSFVTTSRRDIAGKEGKSSIAIKDLGTAVPALL-ETIQADL 491


>gi|307154337|ref|YP_003889721.1| prolyl-tRNA synthetase [Cyanothece sp. PCC 7822]
 gi|306984565|gb|ADN16446.1| prolyl-tRNA synthetase [Cyanothece sp. PCC 7822]
          Length = 600

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 55/243 (22%), Positives = 98/243 (40%), Gaps = 8/243 (3%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q           E+E + H+ L R   +  I   GSG+  +    W++ Q +   +R +
Sbjct: 4   SQMLFVTLREDPAEAEIKSHKLLLRAGYIRRI---GSGIYAYLPLMWRVLQKVSQIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E   PQ+    LW++SG WD+Y      +    D  +  R   L P +     
Sbjct: 61  MNAIGAQECLLPQLQPSELWKESGRWDTYTKAEGIMFALGD--RQERELGLGPTHEEVIT 118

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    ++SYR+LP+ L +  + +R+E      GLMR R F   DA+ F T E    +  
Sbjct: 119 FIAREMIRSYRQLPLNLYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSFHTDETSLKKTY 177

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
           + +     ++++  G     V+  +      GS      A+     VL T   +    + 
Sbjct: 178 QDMDQAYRNMFRRCGLAFRGVEADSGAIGGSGSQEFMVLADAGEDEVLYTADGNYAANVE 237

Query: 465 TGV 467
             V
Sbjct: 238 KAV 240



 Score = 81.8 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 29/162 (17%), Positives = 62/162 (38%), Gaps = 9/162 (5%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I Q+         A Y N   E+  P+++     G        + +++  +  
Sbjct: 435 RGIEVGHIFQLGTKYSQAMGATYTNEQGEEI-PLVMGCYGMGVSRLAQAAVEQSYDKDGI 493

Query: 548 LWL---SPIQAIVTT---ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W    +P  AIV          VE A+++   L    +    D R+     K ++  + 
Sbjct: 494 IWPVAIAPYHAIVVIPDLNDPLQVETAEKLYQELNQVGVETLLDDRDARAGVKFKDSELI 553

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            IP  I+ G +   +  + +    S  +Q +++ + +  L +
Sbjct: 554 GIPYRIVTG-RSLKDGKVEVVERASKKSQDIAIEEVVSTLQQ 594


>gi|303251144|ref|ZP_07337328.1| prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|307253514|ref|ZP_07535384.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|302649995|gb|EFL80167.1| prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|306859015|gb|EFM91058.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
          Length = 571

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 64/329 (19%), Positives = 117/329 (35%), Gaps = 17/329 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q   +       +++   H+ + R   +  +A   SG+  W   G K+ + + + +R 
Sbjct: 3   TSQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMA---SGLYNWLPTGIKVLKKVENIIRE 59

Query: 286 KIKDD-YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LWQ+SG W+ Y A +             R F L P +    
Sbjct: 60  EMNKGGAIEVLMPVVQPAELWQESGRWNDYGAELLRFVDRGS-----RDFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP+ L +  + +R+E      G+MR R F   DA+ F   +    E 
Sbjct: 115 TDLVRREVSSYKQLPLNLYQIQTKFRDEVRPRF-GVMRSREFVMKDAYSFHVDKASLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++ +  +I+   G +   V+  T       S      A +    V+ + ++     I
Sbjct: 174 YDVMYQVYSNIFTRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVFSTESDFAANI 233

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
                +  G    P  E  L D          +   FNLP       +          ++
Sbjct: 234 ELAEAVAVGERQAPTAEMQLVDT-PNAKTINELVEQFNLPIEKTVKTLIVKGATEEQPLV 292

Query: 524 HRAVFGSIERFIGIMIENFKGNLPLWLSP 552
              + G  E     + E      PL   P
Sbjct: 293 ALVLRGDHE-----LNEIKAQKHPLVADP 316



 Score = 92.5 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 63/168 (37%), Gaps = 14/168 (8%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           I R  + G I Q+         A       +   P+++    +G  + R +   IE +  
Sbjct: 403 IKRGIEVGHIFQLGTKYSEAMKATVQGEDGK---PLVMTMGCYGIGVTRVVAAAIEQHHD 459

Query: 544 GNLPLWL----SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
               +W     +P    +  +    + S  ++++E+   LK+  + +  D R E      
Sbjct: 460 DRGIIWPSDEIAPFTVAIVPMNMHKSESVQQFSEELYRTLKAQGVDVIFDDRKERPGVMF 519

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +  +  +P +++ G+K  +   I  +   +   Q ++    +  L +
Sbjct: 520 ADMELIGVPHMVVIGEKNLANGEIEYKNRRTGEKQMIAKDQLLAFLKE 567


>gi|32399017|emb|CAD98257.1| aminoacyl-tRNA synthetase, probable [Cryptosporidium parvum]
          Length = 688

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 91/509 (17%), Positives = 174/509 (34%), Gaps = 65/509 (12%)

Query: 159 VEILESIPAKENVTLYRQGEWFDLCRGPHVR------STGQVKKFFKLMKVAGAYWRGDS 212
           + ++        V      +   +   P             + KF +       ++  D+
Sbjct: 114 LSLIFEKSGGIQVYFDECLKDKKVFVHPLTNTESFSIHINDIVKFAESCGKKVKWFSMDN 173

Query: 213 NRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKG 272
                           + L         S    + ++  + ++     D SG        
Sbjct: 174 LEEQKPAGKPEESKENESLLGITADKITSFADWYSQVIVKSEMIEY-YDISGCYILRPWS 232

Query: 273 WKIFQTLISYMRRKI-KDDYEEINTPQ-VLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           + I++T+ S   +KI + D +    P  V  + L  +  H + +   +  V  +  +   
Sbjct: 233 YFIWETIQSVFDQKIKQHDVQNAYFPIFVTQKKLETEKDHVEGFSPEVAWVTKSGKSDL- 291

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
               A++P +       F   ++S+R+LP+++ ++ S+ R E        +R R F   +
Sbjct: 292 AEPIAIRPTSETIMYPYFAKWIRSHRDLPLKINQWTSIVRWEFKHPT-PFIRTREFLWQE 350

Query: 391 AHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMK 449
            H    T+++       I N   SIY+D     ++    +  EK  G D           
Sbjct: 351 GHTAHSTRKEALEMVDIILNEYASIYEDLLATPVVKGTKSENEKFPGGD----------- 399

Query: 450 GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAF 509
                I  S +  I                       IGR  Q  T  +     S+   F
Sbjct: 400 -----ITKSIEGFIPE---------------------IGRAVQAATSHLLGQNFSK--MF 431

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL----SPIQAIV------TT 559
            V    EK +    H+  +G   R IG+MI     N  L L    +P+Q I+      T 
Sbjct: 432 GVEFEDEKGNKEYAHQTSWGLTTRAIGVMIMTHGDNKGLVLPPKVAPVQVIIIPIIFKTV 491

Query: 560 ITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERS 618
           IT    +   E+  +LK   + ++ D R N T  +K     +K + +    G ++  +RS
Sbjct: 492 ITEEQKKICNEVECILKKAGVRVKIDDRSNYTPGWKYNHWEVKGVCLRFEVGPRDIEKRS 551

Query: 619 IGIRRFGSTTTQKVSLLDA---IPILTKE 644
           + +    +     + + +    IP L +E
Sbjct: 552 VRVVVRDNMEKMDIPISELESKIPKLLEE 580


>gi|71665969|ref|XP_819949.1| prolyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener]
 gi|70885272|gb|EAN98098.1| prolyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 810

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 81/448 (18%), Positives = 167/448 (37%), Gaps = 63/448 (14%)

Query: 220 IYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTL 279
           I G A  T +     L   EE+  + + ++  + ++     D SG        + I+  +
Sbjct: 289 ITGGANVTGETKLGILVKREENFSQWYVEVITKAEMIEY-YDVSGCYIIRPWAFFIWSRI 347

Query: 280 ISYMRRKIKD-DYEEINTPQ-VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALK 337
             +   +I+    E+   P  V    L ++  H + +   +  V  A +T  ++   A++
Sbjct: 348 QRFFGARIESMGVEDCYFPMFVSKSCLEREKDHVEGFAPEVAWVTKAGETDLEV-PVAIR 406

Query: 338 PMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCT 396
           P +       +   ++S+R+LPVRL  + +V R E S      +R R F   + H  + T
Sbjct: 407 PTSETVMYPYYAKWIRSHRDLPVRLNMWNNVIRWEFSHPT-PFIRTREFLWQEGHCAWQT 465

Query: 397 KEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIK 456
           +E+   E L+I +   ++Y++     ++    T  EK  G                    
Sbjct: 466 EEECSQEVLEILDHYAAVYEELLAVPVVKGRKTEKEKFAGG------------------- 506

Query: 457 NSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHS 515
                            +Y    E  +  A+GR  Q GT   +  N    FN  + +   
Sbjct: 507 -----------------YYTTTVETYI-AAVGRGCQGGTSHNLGQNFGKMFNISFQDPEK 548

Query: 516 EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTTIT---------- 561
                ++  +  +G   R IG+M      +  + L P    +Q ++  +           
Sbjct: 549 NDGSTLIPWQNSWGLSTRVIGVMTMVHGDDSGMVLPPRVASVQVVIIPVGITKNTTDEER 608

Query: 562 SSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIG 620
            S +E  + +  +L S  +  + D R+  +  ++     +K +P+ +  G +E +   I 
Sbjct: 609 KSLLEGCKTLERVLVSGGIRAKADLRDNYSPGWRFNHWEVKGVPVRVELGPRELASLKIS 668

Query: 621 IRRFGSTTTQKV----SLLDAIPILTKE 644
           +      + + +     L  A+ +L  E
Sbjct: 669 LVLRHDGSRRSLLWDKELPTAMTLLMDE 696


>gi|66475910|ref|XP_627771.1| proline-tRNA synthetase; class II aaRS (ybak RNA binding domain
           plus tRNA synthetase) [Cryptosporidium parvum Iowa II]
 gi|46229315|gb|EAK90164.1| proline-tRNA synthetase; class II aaRS (ybak RNA binding domain
           plus tRNA synthetase) [Cryptosporidium parvum Iowa II]
          Length = 719

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 91/509 (17%), Positives = 174/509 (34%), Gaps = 65/509 (12%)

Query: 159 VEILESIPAKENVTLYRQGEWFDLCRGPHVR------STGQVKKFFKLMKVAGAYWRGDS 212
           + ++        V      +   +   P             + KF +       ++  D+
Sbjct: 145 LSLIFEKSGGIQVYFDECLKDKKVFVHPLTNTESFSIHINDIVKFAESCGKKVKWFSMDN 204

Query: 213 NRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKG 272
                           + L         S    + ++  + ++     D SG        
Sbjct: 205 LEEQKPAGKPEESKENESLLGITADKITSFADWYSQVIVKSEMIEY-YDISGCYILRPWS 263

Query: 273 WKIFQTLISYMRRKI-KDDYEEINTPQ-VLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           + I++T+ S   +KI + D +    P  V  + L  +  H + +   +  V  +  +   
Sbjct: 264 YFIWETIQSVFDQKIKQHDVQNAYFPIFVTQKKLETEKDHVEGFSPEVAWVTKSGKSDL- 322

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
               A++P +       F   ++S+R+LP+++ ++ S+ R E        +R R F   +
Sbjct: 323 AEPIAIRPTSETIMYPYFAKWIRSHRDLPLKINQWTSIVRWEFKHPT-PFIRTREFLWQE 381

Query: 391 AHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMK 449
            H    T+++       I N   SIY+D     ++    +  EK  G D           
Sbjct: 382 GHTAHSTRKEALEMVDIILNEYASIYEDLLATPVVKGTKSENEKFPGGD----------- 430

Query: 450 GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAF 509
                I  S +  I                       IGR  Q  T  +     S+   F
Sbjct: 431 -----ITKSIEGFIPE---------------------IGRAVQAATSHLLGQNFSK--MF 462

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL----SPIQAIV------TT 559
            V    EK +    H+  +G   R IG+MI     N  L L    +P+Q I+      T 
Sbjct: 463 GVEFEDEKGNKEYAHQTSWGLTTRAIGVMIMTHGDNKGLVLPPKVAPVQVIIIPIIFKTV 522

Query: 560 ITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERS 618
           IT    +   E+  +LK   + ++ D R N T  +K     +K + +    G ++  +RS
Sbjct: 523 ITEEQKKICNEVECILKKAGVRVKIDDRSNYTPGWKYNHWEVKGVCLRFEVGPRDIEKRS 582

Query: 619 IGIRRFGSTTTQKVSLLDA---IPILTKE 644
           + +    +     + + +    IP L +E
Sbjct: 583 VRVVVRDNMEKMDIPISELESKIPKLLEE 611


>gi|260548877|ref|ZP_05823099.1| prolyl-tRNA synthetase [Acinetobacter sp. RUH2624]
 gi|260408045|gb|EEX01516.1| prolyl-tRNA synthetase [Acinetobacter sp. RUH2624]
          Length = 571

 Score =  151 bits (382), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 72/427 (16%), Positives = 147/427 (34%), Gaps = 47/427 (11%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++           ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   ASRFLFATLRETPNDAEVISHQLMLRAGMIRKLA---SGLYTWLPMGTRVLKKVDAIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P      LW++SG ++ Y   +   K   D       F L P +    
Sbjct: 60  EMNRSGAMEVFMPVTQPASLWEESGRYEQYGPELLRFKDRHDNP-----FVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + LKSY++LPV   +  + +R+E      G+MR R F   DA+ F   ++   E 
Sbjct: 115 TDLARNELKSYKQLPVNFYQIQTKFRDEIRPRF-GVMRSREFIMKDAYSFHATQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +++    I+   G +   V+  T       S      A +    +  + ++     +
Sbjct: 174 YDVMYDTYSRIFTRLGLDFRPVQADTGSIGGSASHEFHVLASSGEDDIAFSTESDYAANV 233

Query: 464 N--TGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF--NAFYVNSHSEKCH 519
                VL+GE A   P  E+ L +   +       Q     P +            EK +
Sbjct: 234 EMAEAVLVGERA--APAQEFKLVETPNQKTIADVCQFLNADPKQSVKALLVQGIADEKGN 291

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP------IQAIVTTITSSAVEYAQEIAN 573
             ++   + G  E     + E      PL  +P       Q     +T+           
Sbjct: 292 VPVVALFLRGDHE-----LNEIKAEKHPLVAAPLTFATEEQLQAFGLTAGFTGP-----Q 341

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR-RFGSTTTQKV 632
            L    +++  D     ++               + G  EA + ++G+     +   +  
Sbjct: 342 GLVEKGITVIVDRAASVLSD-------------FVAGANEADKHAVGVNWERDAQIIEIF 388

Query: 633 SLLDAIP 639
            L + + 
Sbjct: 389 DLRNVVE 395



 Score = 89.5 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 59/167 (35%), Gaps = 13/167 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           I R  + G I Q+            +    +   P  +    +G  + R +   IE N+ 
Sbjct: 408 IKRGIEVGHIFQLGTKYSEALGCKVLGEDGK---PFTVTMGCYGIGVTRVVAAAIEQNYD 464

Query: 544 GNLPLWL---SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
               +W    +P +  +  +    +   +E A+ +   L++    +  D RNE    K  
Sbjct: 465 DKGIIWPQAIAPFEIAIVPMNAHKSPRTLEAAEALYAELQAQGFDVLLDDRNERPGVKFS 524

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  +  IP  I+ G+K     +   +         ++  + +  L +
Sbjct: 525 DLELMGIPHRIVIGEKGLDAGTFEYKGRRDAEASNLTKEELLAKLAR 571


>gi|170584765|ref|XP_001897164.1| bifunctional aminoacyl-tRNA synthetase [Brugia malayi]
 gi|158595450|gb|EDP34004.1| bifunctional aminoacyl-tRNA synthetase, putative [Brugia malayi]
          Length = 1572

 Score =  151 bits (382), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 73/400 (18%), Positives = 139/400 (34%), Gaps = 60/400 (15%)

Query: 260  EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRAN 317
             D SG        + I++ +  +   +IK         P  + Q+  Q +  H D +   
Sbjct: 1117 YDVSGCYILRPWSFAIWEIVKKWFDTEIKKCGVRNCYFPIFVSQNGLQREKEHIDDFAPE 1176

Query: 318  MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
            +  V  A ++       A++P +       +   ++SYR+LP+RL ++ +V R E     
Sbjct: 1177 VAWVTRAGNSEL-SEPIAIRPTSETVMYPSYAKWIQSYRDLPIRLNQWCNVVRWEFKHPT 1235

Query: 378  HGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
               +R R F   + H  F TK++   E   I +L   +Y D     ++    +  EK  G
Sbjct: 1236 -PFLRTREFLWQEGHTAFQTKQEAEEEVFAILDLYAKVYTDLFAIPVIKGRKSEKEKFAG 1294

Query: 437  SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
             +                                    +    E  +    GR  Q  T 
Sbjct: 1295 GE------------------------------------FTTTVEAYVP-VNGRGIQGATS 1317

Query: 497  -QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLS 551
              +  N    F+  +     E        +  +G   R IG MI    +N    LP  ++
Sbjct: 1318 HHLGQNFSKMFDISF--EDPETGKKTFAWQNSWGMTTRTIGAMIMIHSDNDGLVLPPRVA 1375

Query: 552  PIQAIVTT----------ITSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSI 600
            PIQ I+            I    +   +EI   L++  + ++ D R+  +  +K     +
Sbjct: 1376 PIQVIIIPVGIASQMHNKIKQEIITKIEEIIKTLENSKIRVDIDLRDNYSPGWKFNHWEL 1435

Query: 601  KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
            K +PI +  G K+  +  +      +     + + + +  
Sbjct: 1436 KGVPIRLELGPKDIEKSQVTCVTRYNKHKSVIPIDNLLAK 1475


>gi|114152249|sp|Q2RZJ2|SYP_SALRD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
          Length = 490

 Score =  151 bits (382), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 60/432 (13%), Positives = 148/432 (34%), Gaps = 69/432 (15%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
            +E   + ++ + R   L   +     +I     G  +++ +   + +  KD  ++    
Sbjct: 8   RDEDYSQWYQDVVRNGQLAENSPARGCMII-KPNGMALWENMRDQLDQMFKDTGHQNYYF 66

Query: 297 PQVLDQHLWQ-QSGHWDSYRANMFAVKC------------ADDTIKDLRTFALKPMNCPG 343
           P  + +   + ++ H + +      V               D   +    + ++P +   
Sbjct: 67  PLFIPERYMEREAEHVEGFAKECAVVTHSRLTQDEEGDLVPDPESELGENYIVRPTSETI 126

Query: 344 HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE 403
               ++  ++SYR+LP+   ++ +V R E    L   +R   F   + H   T      E
Sbjct: 127 IWDTYSKWIQSYRDLPLLYNQWANVVRWEMRPRL--FLRTAEFLWQEGH---TAHATETE 181

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            ++    ++ +Y  F                                  + +        
Sbjct: 182 AVEEAERMLDVYTTF--------------------------------AEEYMAMPVLQGR 209

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVM 522
            T      GA      E +++D  G+  Q GT   +  N    F+  + N  +E+ +   
Sbjct: 210 KTESERFPGAVDTYCIEAMMQD--GKALQAGTSHFLGQNFAKAFDCTFTNEDNEEEY--- 264

Query: 523 IHRAVFGSIERFIGIMIENFKGNL----PLWLSPIQAIVTTITSS------AVEYAQEIA 572
           +    +G   R IG +I     +     P  L+P Q ++  +          +E  + + 
Sbjct: 265 VWATSWGVSTRLIGGLIMTHSDDQGLVLPPKLAPHQVVIVPLFFDDDQEGPVMETCERLQ 324

Query: 573 NLLKSHHLSIETD-FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
             L+ H + ++ D    ++  ++  EH ++ +P+ +  G ++    ++ + R  +   + 
Sbjct: 325 ERLEDHGIRVKMDQNHTQSPGWRFSEHELRGVPLRLAIGPRDLENDNVEMARRDTQEKEV 384

Query: 632 VSLLDAIPILTK 643
           V        ++ 
Sbjct: 385 VPQDGIAERVSD 396


>gi|309805216|ref|ZP_07699268.1| TGS domain protein [Lactobacillus iners LactinV 09V1-c]
 gi|308165450|gb|EFO67681.1| TGS domain protein [Lactobacillus iners LactinV 09V1-c]
          Length = 179

 Score =  151 bits (382), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 57/177 (32%), Positives = 94/177 (53%), Gaps = 5/177 (2%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPE 65
           +T PDGS K F    T  +VA SI+ SLAK AVA  +N ++  L   V  +  + IIT +
Sbjct: 5   ITLPDGSKKEFNHALTIKEVASSIATSLAKSAVAGKVNDEIRPLDFVVDTDARVAIITDK 64

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
           D   L V+R++ A +        +P V++    + EDGF+ D DKE    + EL  +EK+
Sbjct: 65  DEEGLQVLRNTAAFVFEMVASKQYPSVRLGTSELEEDGFFVDTDKEDQIKASELPDLEKE 124

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           MQ+I+        + +S  +  +LF+   + YK+E+L+     + V +Y+  ++ D 
Sbjct: 125 MQKIVKNGEKIEYKIVSKSELLDLFK--DDPYKLELLKE--EADEVAVYKLEDFVDF 177


>gi|288937023|ref|YP_003441082.1| prolyl-tRNA synthetase [Klebsiella variicola At-22]
 gi|288891732|gb|ADC60050.1| prolyl-tRNA synthetase [Klebsiella variicola At-22]
          Length = 572

 Score =  151 bits (382), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 51/249 (20%), Positives = 99/249 (39%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGVRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E+  P V    LWQ+SG W+ Y   +  +    D     R F L P +    
Sbjct: 60  EMNNAGAIEVLMPVVQPSELWQESGRWEQYGPELLRIADRGD-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLIRNELNSYKQLPLNFYQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHTSQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   G +   V+  T       S      A++    V+ +  +     I
Sbjct: 174 YDAMYTAYSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVIFSDSSDYAANI 233

Query: 464 NTGVLLGEG 472
                +   
Sbjct: 234 EFAEAVAPK 242



 Score = 86.8 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 33/167 (19%), Positives = 59/167 (35%), Gaps = 13/167 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           I R  + G I Q+        NA             ++    +G  + R +   IE NF 
Sbjct: 405 IKRGIEVGHIFQLGTKYSQAMNAAVQGEDG---RNQILTMGCYGIGVTRVVAAAIEQNFD 461

Query: 544 GNLPLWL---SPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
               +W    +P Q  +  +         E A+++   L++H + +  D R E       
Sbjct: 462 DRGIIWPDAIAPFQVAILPMNMHKSYRVQELAEKLYAELRAHGIDVLMDDRKERPGVMFA 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  +  IP  I+ GD+      I  +   +   Q +   D +  L K
Sbjct: 522 DMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVEYLVK 568


>gi|307246760|ref|ZP_07528828.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
 gi|307255744|ref|ZP_07537547.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9
           str. CVJ13261]
 gi|307260196|ref|ZP_07541905.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 11
           str. 56153]
 gi|306852335|gb|EFM84572.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
 gi|306861304|gb|EFM93295.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9
           str. CVJ13261]
 gi|306865741|gb|EFM97620.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 11
           str. 56153]
          Length = 571

 Score =  151 bits (382), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 64/329 (19%), Positives = 117/329 (35%), Gaps = 17/329 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q   +       +++   H+ + R   +  +A   SG+  W   G K+ + + + +R 
Sbjct: 3   TSQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMA---SGLYNWLPTGIKVLKKVENIIRE 59

Query: 286 KIKDD-YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LWQ+SG W+ Y A +             R F L P +    
Sbjct: 60  EMNKGGAIEVLMPVVQPAELWQESGRWNDYGAELLRFVDRGS-----RDFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP+ L +  + +R+E      G+MR R F   DA+ F   +    E 
Sbjct: 115 TDLVRREVSSYKQLPLNLYQIQTKFRDEVRPRF-GVMRSREFVMKDAYSFHVDKASLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++ +  +I+   G +   V+  T       S      A +    V+ + ++     I
Sbjct: 174 YDVMYQVYSNIFTRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVFSTESDFAANI 233

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
                +  G    P  E  L D          +   FNLP       +          ++
Sbjct: 234 ELAEAVAVGERQAPTAEMQLVDT-PNAKTINELVEQFNLPIEKTVKTLIVKGATEEQPLV 292

Query: 524 HRAVFGSIERFIGIMIENFKGNLPLWLSP 552
              + G  E     + E      PL   P
Sbjct: 293 ALVLRGDHE-----LNEIKAQKHPLVADP 316



 Score = 92.2 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 63/168 (37%), Gaps = 14/168 (8%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           I R  + G I Q+         A       +   P+++    +G  + R +   IE +  
Sbjct: 403 IKRGIEVGHIFQLGTKYSEAMKATVQGEDGK---PLVMTMGCYGIGVTRVVAAAIEQHHD 459

Query: 544 GNLPLWL----SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
               +W     +P    +  +    + S  ++++E+   LK+  + +  D R E      
Sbjct: 460 ERGIIWPSDEIAPFTVAIVPMNMHKSESVQQFSEELYRTLKAQGVDVIFDDRKERPGVMF 519

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +  +  +P +++ G+K  +   I  +   +   Q ++    +  L +
Sbjct: 520 ADMELIGVPHMVVIGEKNLANGEIEYKNRRTGEKQMIAKDQLLAFLKE 567


>gi|295098681|emb|CBK87771.1| prolyl-tRNA synthetase, family II [Enterobacter cloacae subsp.
           cloacae NCTC 9394]
          Length = 572

 Score =  151 bits (382), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 57/264 (21%), Positives = 104/264 (39%), Gaps = 12/264 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGVRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E+  P V    LWQ+SG W+ Y   +  +    D     R F L P +    
Sbjct: 60  EMNNAGAIEVLMPVVQPSELWQESGRWEQYGPELLRIADRGD-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLIRNELSSYKQLPLNFFQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHTSQESLQET 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             K++     I+   G +   V+  T       S      A++    V+ +  +     I
Sbjct: 174 YDKMYAAYSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVIFSDSSDYAANI 233

Query: 464 NTGVLLGEGAFYGPKF-EYILKDA 486
                L      G    E  L D 
Sbjct: 234 EFAEALAPKEPRGAATQEMTLVDT 257



 Score = 84.8 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 31/166 (18%), Positives = 56/166 (33%), Gaps = 11/166 (6%)

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN 545
           I R  + G I    +  SR  A       E     ++    +G  + R +   IE     
Sbjct: 405 IKRGIEVGHIFQLGDKYSR--AMNAAVQGEDGRNQVLTMGCYGIGVTRVVAAAIEQNYDE 462

Query: 546 ----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
                P  ++P Q  +  +         E A+++   L +  + +  D R E       +
Sbjct: 463 RGIVWPDNIAPFQVAILPMNMHKSYRVQELAEKLYAELSAKGIDVLMDDRKERPGVMFAD 522

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             +  IP  I+ GD+      I  +   +   Q +   D +  L K
Sbjct: 523 MELIGIPHTIVIGDRNLDSDEIEYKYRRNGEKQMIKTGDILDYLVK 568


>gi|220934299|ref|YP_002513198.1| prolyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7]
 gi|254782924|sp|B8GPP4|SYP_THISH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|219995609|gb|ACL72211.1| prolyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7]
          Length = 574

 Score =  151 bits (382), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 51/249 (20%), Positives = 93/249 (37%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            T+  L        ++E   H+ + R   +  +A   SG+  W   G ++ + +   +R 
Sbjct: 3   ATRFPLATLKETPADAEVISHQLMLRAGMIRRLA---SGLYSWTPLGLRVLRKVEGLVRD 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LWQ+SG W+ Y   +  +K      + +R F   P +    
Sbjct: 60  EMDRAGALELLMPAVQPAELWQESGRWEQYGPELLRLKD-----RHMREFCFGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
                  +KSYR+LPV   +  + +R+E      G+MR R F   DA+ F   E    E 
Sbjct: 115 TDYVRREVKSYRQLPVNYYQIQTKFRDEIRPRF-GVMRAREFLMKDAYSFHVDEDSLKET 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             ++H     I+   G +   V   T       S      A++    +  +  +     +
Sbjct: 174 YARMHEAYTRIFTRCGLDFRAVLADTGSIGGNASHEFHVLADSGEDAIAFSDVSDYAANV 233

Query: 464 NTGVLLGEG 472
                +   
Sbjct: 234 ELAEAVAPA 242



 Score = 76.0 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 59/177 (33%), Gaps = 13/177 (7%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
           P  +      I R  + G I Q+         A  ++   E+   +++    +G  + R 
Sbjct: 395 PSPDGQGSLQIRRGIEVGHIFQLGRKYSEAMGATVLD---EQGRSLVVTMGCYGIGVSRV 451

Query: 535 IGIMIENFKGN----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDF 586
           +   IE          P  L+P    +  I    +    E A  +   L +    +  D 
Sbjct: 452 VAAAIEQNHDAQGIIWPEALAPFTVALCPINAQKSQRLREAADALYERLLNAGFEVFYDD 511

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           R         +  +  IP  ++ G++      I  +    T T +V+L   +  L +
Sbjct: 512 RGLRPGAMFADMELIGIPHRLVLGERGLDAGEIEYKGRRDTDTTQVALDGVLDFLRQ 568


>gi|170768387|ref|ZP_02902840.1| prolyl-tRNA synthetase [Escherichia albertii TW07627]
 gi|170122491|gb|EDS91422.1| prolyl-tRNA synthetase [Escherichia albertii TW07627]
          Length = 572

 Score =  151 bits (382), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 66/367 (17%), Positives = 133/367 (36%), Gaps = 33/367 (8%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGVRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E+  P V    LWQ+SG W+ Y   +  +    D     R F L P +    
Sbjct: 60  EMNNAGAIEVLMPVVQPSELWQESGRWEQYGPELLRIADRGD-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHTSQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   G +   V+  T       S      A++    V+ +  +     I
Sbjct: 174 YDAMYAAYSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFSDTSDYAANI 233

Query: 464 NTGVLLGEGAFYGPKF-EYILKDA--------------IGRDWQCGTIQVDFNLPSRFNA 508
                +      G    E  L D               +  +    T+ V     S F  
Sbjct: 234 ELAEAVAPKEPRGAATQEMTLVDTPNAKTIAELVEQFNLPIEKTVKTLLVKAVEGSSFPL 293

Query: 509 FYVNSHSEKCHPVM-------IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT 561
             +    +     +       +   +  + E  I  +++   G+L     PI  ++    
Sbjct: 294 VALLVRGDHELNEVKAEKLPQVASPLTFATEEEIRAVVKAGPGSLGPVNMPIPVVIDRTV 353

Query: 562 SSAVEYA 568
           ++  ++A
Sbjct: 354 AAMSDFA 360



 Score = 85.2 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 58/177 (32%), Gaps = 13/177 (7%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
           P  +      I R  + G I Q+         A             ++    +G  + R 
Sbjct: 395 PSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDG---RNQILTMGCYGIGVTRV 451

Query: 535 IGIMIENFKGN----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDF 586
           +   IE          P  ++P Q  +  +         E A+++ + L++  + +  D 
Sbjct: 452 VAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLLDD 511

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           R E       +  +  IP  I+ GD+      I  +   +   Q +   D +  L K
Sbjct: 512 RKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVDFLLK 568


>gi|17232545|ref|NP_489093.1| prolyl-tRNA synthetase [Nostoc sp. PCC 7120]
 gi|81852728|sp|Q8YM83|SYP_ANASP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|17134191|dbj|BAB76752.1| prolyl-tRNA synthetase [Nostoc sp. PCC 7120]
          Length = 604

 Score =  151 bits (382), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 55/249 (22%), Positives = 97/249 (38%), Gaps = 8/249 (3%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q           ++E   H+ L R   +  I   GSG+  +    W++ Q +   +R +
Sbjct: 4   SQMLFVTLRDDPSDAEIPSHKLLLRAGYIRRI---GSGIYAYLPLMWRVLQKVSQIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E   PQ+    LW++SG WD+Y      +    D  +  +   L P +     
Sbjct: 61  MNATGAQECLLPQLQPSELWKESGRWDTYTKAEGIMFSLID--RREQQLGLGPTHEEVIT 118

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           A+    ++SYR+LP+ L +  + +R+E      GLMR R F   D + F   E    +  
Sbjct: 119 AIARDMIRSYRQLPLHLYQLQTKFRDEIRPRF-GLMRGREFIMKDGYSFHVDEDSLKKTY 177

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
           + ++    ++ +  G     V+  +      GS      AE     VL T        + 
Sbjct: 178 QDMYQAYSNMLRRAGLAFRPVEADSGAIGGSGSTEFMVLAEAGEDEVLYTDDGKYAANVE 237

Query: 465 TGVLLGEGA 473
             V L   A
Sbjct: 238 KAVSLPADA 246



 Score = 87.1 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 64/162 (39%), Gaps = 9/162 (5%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I Q+         A Y N   E+  P+++     G        + +++  +  
Sbjct: 435 RGIEVGHIFQLGTKYSQALGATYTNEQGEEK-PLVMGCYGVGVSRLAQSAVEQSYDKDGI 493

Query: 548 LWL---SPIQAIV-TTITSS--AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W    +P  AIV     +    VE A+++   L    +    D RNE    K ++  + 
Sbjct: 494 IWPVAIAPYHAIVTIPNINDAQQVEIAEKLYTELNQSGVETLLDDRNERAGVKFKDADLI 553

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            IP  I+ G +  +   + I    +  +Q++ + + I  L +
Sbjct: 554 GIPYRIVTG-RAITNGKVEIVERATRQSQEIPIDEVITTLQQ 594


>gi|262281159|ref|ZP_06058941.1| prolyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
 gi|262257390|gb|EEY76126.1| prolyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
          Length = 571

 Score =  151 bits (382), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 78/428 (18%), Positives = 151/428 (35%), Gaps = 49/428 (11%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++           ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   ASRFLFATLRETPNDAEVISHQLMLRAGMIRKLA---SGLYTWLPMGTRVLKKVDAIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P      LW++SG ++ Y   +   K      +    F L P +    
Sbjct: 60  EMNRSGAMEVFMPVTQPASLWEESGRYEQYGPELLRFKD-----RHANPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + LKSY++LPV   +  + +R+E      G+MR R F   DA+ F   ++   E 
Sbjct: 115 TDMARNELKSYKQLPVNFYQIQTKFRDEIRPRF-GVMRSREFIMKDAYSFHATQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +++    I+   G +   V+  T       S      A +    +  + ++     +
Sbjct: 174 YDVMYDTYSRIFTRLGLDFRPVQADTGSIGGSASHEFHVLASSGEDDIAFSTESDYAANV 233

Query: 464 N--TGVLLGEGAFYGPKFEYIL---KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC 518
                VL+GE A   P  E  L    D    D  C  +  D     +       +  +  
Sbjct: 234 EMAEAVLVGERA--APTQELKLVETPDQKTIDDVCQFLNADPKQSVKALLVQGVADEKGQ 291

Query: 519 HPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP------IQAIVTTITSSAVEYAQEIA 572
            PV +   V G  E     + E      PL  +P       Q     +T+          
Sbjct: 292 VPV-VALFVRGDHE-----LNEIKAEKHPLVAAPLTFATEEQLQAFGLTAGFTGP----- 340

Query: 573 NLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR-RFGSTTTQK 631
             L    L++  D R  ++   I +          + G  EA + ++G+     +  T+ 
Sbjct: 341 QGLVEKGLTVIVD-RAASV---ISD---------FVAGANEADKHAVGVNWERDAQITEV 387

Query: 632 VSLLDAIP 639
             L + + 
Sbjct: 388 FDLRNVVE 395



 Score = 86.8 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 58/167 (34%), Gaps = 13/167 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE---- 540
           I R  + G I Q+            +    +   P  +    +G  + R +   IE    
Sbjct: 408 IKRGIEVGHIFQLGTKYSEALGCKVLGEDGK---PFTVTMGCYGIGVTRVVAAAIEQNYD 464

Query: 541 NFKGNLPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +     P  ++P +  +  +    +   +E A+ +   L++    I  D RNE    K  
Sbjct: 465 DKGIMWPQAIAPFEIAIVPMNAHKSPRTLEAAESLYAELQAQGFDILLDDRNERPGVKFS 524

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  +  IP  I+ G+K     +   +         ++  + +  L +
Sbjct: 525 DLELMGIPHRIVIGEKGLDAGTFEYKGRRDAEASNLTKEELLAKLAR 571


>gi|206579512|ref|YP_002240318.1| prolyl-tRNA synthetase [Klebsiella pneumoniae 342]
 gi|226701300|sp|B5Y1H7|SYP_KLEP3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|206568570|gb|ACI10346.1| prolyl-tRNA synthetase [Klebsiella pneumoniae 342]
          Length = 572

 Score =  151 bits (382), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 51/249 (20%), Positives = 99/249 (39%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGVRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E+  P V    LWQ+SG W+ Y   +  +    D     R F L P +    
Sbjct: 60  EMNNAGAIEVLMPVVQPSELWQESGRWEQYGPELLRIADRGD-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLIRNELNSYKQLPLNFYQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHTSQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   G +   V+  T       S      A++    V+ +  +     I
Sbjct: 174 YDAMYTAYSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVIFSDSSDYAANI 233

Query: 464 NTGVLLGEG 472
                +   
Sbjct: 234 EFAEAVAPK 242



 Score = 86.8 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 33/167 (19%), Positives = 59/167 (35%), Gaps = 13/167 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           I R  + G I Q+        NA             ++    +G  + R +   IE NF 
Sbjct: 405 IKRGIEVGHIFQLGTKYSQAMNAAVQGEDG---RNQILTMGCYGIGVTRVVAAAIEQNFD 461

Query: 544 GNLPLWL---SPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
               +W    +P Q  +  +         E A+++   L++H + +  D R E       
Sbjct: 462 DRGIIWPDAIAPFQVAILPMNMHKSYRVQELAEKLYAELRAHGIDVLMDDRKERPGVMFA 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  +  IP  I+ GD+      I  +   +   Q +   D +  L K
Sbjct: 522 DMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVEYLVK 568


>gi|145593854|ref|YP_001158151.1| prolyl-tRNA synthetase [Salinispora tropica CNB-440]
 gi|145303191|gb|ABP53773.1| prolyl-tRNA synthetase [Salinispora tropica CNB-440]
          Length = 468

 Score =  151 bits (382), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 64/398 (16%), Positives = 139/398 (34%), Gaps = 54/398 (13%)

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
            R ++ L  +  L         ++     G+ I++ + + M  +IK    E    P  + 
Sbjct: 13  PRWYQDLIAKAKLADNGPVRGTMVI-RPAGYAIWERMQAEMDNRIKAAGAENAYFPLFIP 71

Query: 302 QHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +   + ++ H + +   +  V              ++P +           + SYR+LP+
Sbjct: 72  EGHLKREAEHVEGFSPELAVVTHGGGKQL-AEPVVVRPTSETVIGEFMAKWVDSYRDLPL 130

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
            L ++ +V R E        +R   F   + H   T  +      +              
Sbjct: 131 LLNQWANVVRWELRP--RIFLRTSEFLWQEGHTAHTTREDARAYARRI------------ 176

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
                              L +  E++M  VL       Q  + T      GA      E
Sbjct: 177 -------------------LHEAYEDLMVNVL---AIPVQVGLKTARERFAGATATYTLE 214

Query: 481 YILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
            ++ D  G+  Q GT   +  N    F+  Y ++   + +        +G+  R +G +I
Sbjct: 215 GMMGD--GKALQLGTSHELGQNFGRAFDISYTSAEGGREYA---WTTSWGTSTRMLGGLI 269

Query: 540 ----ENFKGNLPLWLSPIQAIVTTITSS--AVEYAQEIANLLKSHHLSIETDFRNETI-N 592
               ++    +P  L+P+QA V  +       E A  + + L+   + +  D R +T   
Sbjct: 270 MCHGDDDGLRVPPKLAPVQAYVMVVKDGEGVGEAAARLHDALRDAGVRVALDDRTDTPFG 329

Query: 593 YKIREHSIKKIPIIIICGDKEASER-SIGIRRFGSTTT 629
            +  +  ++  P+ +  G ++ +   ++ +RR   + +
Sbjct: 330 RRAVDAELRGYPVRVEIGPRDLAAGNAVVVRRTDGSKS 367


>gi|293363544|ref|ZP_06610300.1| proline--tRNA ligase [Mycoplasma alligatoris A21JP2]
 gi|292552893|gb|EFF41647.1| proline--tRNA ligase [Mycoplasma alligatoris A21JP2]
          Length = 478

 Score =  151 bits (382), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 68/418 (16%), Positives = 150/418 (35%), Gaps = 58/418 (13%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
           LE    + +  + ++ +L         ++F     + I++ +   +    K+     +  
Sbjct: 10  LETDFAKWYTDVVKQGNLIAYGPAKGTLVF-KPNSYGIWELIQQNLNEIFKERGVNNVYL 68

Query: 297 PQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P ++ + L+  +  H + +   +  V    +     + + ++P +      +F + + SY
Sbjct: 69  PLLIPESLFSLEKDHIEGFNPELATVTHVGNKELQEK-YYIRPTSEVLFADLFKNSIDSY 127

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK--IHNLIIS 413
            +LP+   ++ +V R E   + +  +R R F   + H  C  + +    L   + +    
Sbjct: 128 NDLPLVYNQWANVVRWEK--TTNPFLRSREFLWQEGHT-CHADPIEARKLTRCMISTYAK 184

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
             K+F     +V   T  EK  G                                    A
Sbjct: 185 FLKNFLAIPTIVGKKTPYEKFAG------------------------------------A 208

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
                 E ++KD  GR  Q GT      N    ++  + N ++E  +   +++  +G   
Sbjct: 209 CSTYTVEAMMKD--GRALQAGTSHYLAQNFSKPYSIVFKNKNNELEN---VYQTSWGVST 263

Query: 533 RFIGIMIENFKGN----LPLWLSPIQAIVTTITSSAVEYAQEIANLLKS---HHLSIETD 585
           R IG +I     N    +P  ++PIQ  +  +  +     +E++  L         +  D
Sbjct: 264 RLIGALIMTHGDNRGIIIPPRVAPIQIDLIELFGAKSAKVKEVSQKLYELLRRKWRVRVD 323

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             ++   +K     I+ +P+ I  G ++     + I R  +     V+  D   I+ K
Sbjct: 324 ASDKQPGFKAANSEIQGVPLRIEIGPRDLENDMVTIVRRDTLEKTLVNYNDVKKIIQK 381


>gi|290512444|ref|ZP_06551810.1| prolyl-tRNA synthetase [Klebsiella sp. 1_1_55]
 gi|289774785|gb|EFD82787.1| prolyl-tRNA synthetase [Klebsiella sp. 1_1_55]
          Length = 583

 Score =  151 bits (382), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 51/249 (20%), Positives = 99/249 (39%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 14  TSQYLLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGVRVLKKVENIVRE 70

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E+  P V    LWQ+SG W+ Y   +  +    D     R F L P +    
Sbjct: 71  EMNNAGAIEVLMPVVQPSELWQESGRWEQYGPELLRIADRGD-----RPFVLGPTHEEVI 125

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 126 TDLIRNELNSYKQLPLNFYQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHTSQESLQET 184

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   G +   V+  T       S      A++    V+ +  +     I
Sbjct: 185 YDAMYTAYSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVIFSDSSDYAANI 244

Query: 464 NTGVLLGEG 472
                +   
Sbjct: 245 EFAEAVAPK 253



 Score = 86.8 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 33/167 (19%), Positives = 59/167 (35%), Gaps = 13/167 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           I R  + G I Q+        NA             ++    +G  + R +   IE NF 
Sbjct: 416 IKRGIEVGHIFQLGTKYSQAMNAAVQGEDG---RNQILTMGCYGIGVTRVVAAAIEQNFD 472

Query: 544 GNLPLWL---SPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
               +W    +P Q  +  +         E A+++   L++H + +  D R E       
Sbjct: 473 DRGIIWPDAIAPFQVAILPMNMHKSYRVQELAEKLYAELRAHGIDVLMDDRKERPGVMFA 532

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  +  IP  I+ GD+      I  +   +   Q +   D +  L K
Sbjct: 533 DMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVEYLVK 579


>gi|99034562|ref|ZP_01314532.1| hypothetical protein Wendoof_01000659 [Wolbachia endosymbiont of
           Drosophila willistoni TSC#14030-0811.24]
          Length = 339

 Score =  151 bits (382), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 72/353 (20%), Positives = 130/353 (36%), Gaps = 35/353 (9%)

Query: 309 GHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV 368
           G +D Y   M  +K      +        P +      +    +KSY++LP+ L +    
Sbjct: 1   GRYDDYGKEMLRIKD-----RHEEDMLFGPTHEEIATDLIRDVVKSYKDLPLCLYQIQWK 55

Query: 369 YRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKL 427
           +R+E     +G+MR R F   DA+ F    E   N    ++   I I+K  GF  I V+ 
Sbjct: 56  FRDEVRPR-YGVMRGREFLMKDAYSFDVDYEGALNSYNLMYKTYIKIFKRMGFTPIGVRA 114

Query: 428 STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAI 487
            T P     S      A N  +  L    N   + + +  +    + Y       + D +
Sbjct: 115 DTGPIGGNLSHEFHILA-NTGESTL-YYDNKFSELLESEDIESLKSIYA------VADDM 166

Query: 488 GRDWQCGTIQVDFNLPSRFNAFYVNSHSEK-------------CHPVMIHRAVFGS-IER 533
                C   Q   N+       ++    +K                V IH   +G  + R
Sbjct: 167 HDPETCPISQEQLNVSKGIEIGHIFYFGDKYSKPMKASVTSQDGKNVNIHMGSYGIGVSR 226

Query: 534 FIGIMIENFKGN----LPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE 589
            +G +IE F  +     P  ++P +  +  + +   E A +I   LKS    +  D    
Sbjct: 227 LVGAIIEAFHDDKGIIWPEEVAPFRIGLINLQTKVTEAADKIYKALKS--DEVLYDDTEG 284

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           ++  K     +  +P  II G K  SE  + ++   +   +++ + +AI   +
Sbjct: 285 SVGVKFSRMDLIGLPWQIIVGKKAVSENIVEVKNRATGEVKEMQIEEAINHFS 337


>gi|150025459|ref|YP_001296285.1| prolyl-tRNA synthetase [Flavobacterium psychrophilum JIP02/86]
 gi|166980123|sp|A6GZF3|SYP_FLAPJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|149772000|emb|CAL43476.1| Proline--tRNA ligase [Flavobacterium psychrophilum JIP02/86]
          Length = 492

 Score =  151 bits (382), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 72/442 (16%), Positives = 164/442 (37%), Gaps = 73/442 (16%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
           +++ L    E   + + +L    DL   +     ++     G+ I++ + + + R  K+ 
Sbjct: 1   MSKNLTTRAEDYSKWYNELVVRADLAENSGVRGCMVI-KPYGYAIWEKMQAELDRMFKET 59

Query: 290 DYEEINTPQVLDQHLWQ-----------QSGHWDSYRANMFAVK----CADDTIKDLRTF 334
            +     P  + + +++           +      YR      K      D   K     
Sbjct: 60  GHSNAYFPLFVPKSMFEAEEKNAEGFAKECAIVTHYRLKNDPDKPGKLMVDPNAKLEEEL 119

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV- 393
            ++P +     + +   ++SYR+LP+ + ++ +V R E        +R   F   + H  
Sbjct: 120 IVRPTSEAIIWSTYKGWIQSYRDLPLLINQWANVVRWEMR--TRLFLRTAEFLWQEGHTA 177

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
             T+++   E  K+ N+     ++F    ++  L T  E+  G++  +            
Sbjct: 178 HATRKEAIEESEKMMNVYADFAQNFMAIPVIKGLKTETERFAGAEETY------------ 225

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVN 512
                                     E +++D  G+  Q GT   +  N    F+  + N
Sbjct: 226 ------------------------CIEALMQD--GKALQAGTSHFLGQNFAKAFDVKFAN 259

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVEY- 567
           +  ++ H   +    +G   R +G ++    ++    LP  L+PIQ ++  I  +  E+ 
Sbjct: 260 AEGKQEH---VWGTSWGVSTRLMGALVMTHSDDNGLVLPPNLAPIQVVIVPIFKTDEEFE 316

Query: 568 -----AQEIANLLKSHHLSIETDFRN-ETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
                A ++ +  K  ++S++ D R  +   +K  E  +K +P+ I  G K+    +  I
Sbjct: 317 KISALANDLISQFKKLNISVKFDNRTTQKPGFKFAEWELKGVPVRIAIGPKDLENETFEI 376

Query: 622 RRFGSTTTQKVSLLDAIPILTK 643
            R  + T +       +  ++ 
Sbjct: 377 ARRDTLTKEVKPKEGIVKYISD 398


>gi|148244484|ref|YP_001219178.1| prolyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA]
 gi|166980170|sp|A5CX68|SYP_VESOH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|146326311|dbj|BAF61454.1| prolyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA]
          Length = 560

 Score =  151 bits (382), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 45/241 (18%), Positives = 97/241 (40%), Gaps = 11/241 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            T+  +        +++   H+ + R      I++   G+  +   G ++ Q + + +R+
Sbjct: 3   TTKLLIPTQKEAPNDAKIISHQLMIRAG---LISKLALGLYSYLPIGIRVLQKVENIIRQ 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +E+  P V    LW++SG W+ Y A +          +  R F L P +    
Sbjct: 60  EMNKSGAQEVLMPIVQPAELWKESGRWNKYGAELLRFID-----RHQREFCLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    L+SY++LP+   +  + +R+E      G++R+R F   DA+ F   E    E 
Sbjct: 115 THLARQYLRSYKQLPMNFYQIQTKFRDEIRPRF-GVIRMREFIMKDAYSFHIDEASLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            + ++    +I+   G    +V   +       S      A++    +  + K+     I
Sbjct: 174 YEVMYKTYCNIFNRLGLNYRIVLADSGSIGGNTSHEFHVLADSGEDTICFSDKSDYAANI 233

Query: 464 N 464
            
Sbjct: 234 E 234



 Score = 69.4 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/181 (18%), Positives = 63/181 (34%), Gaps = 13/181 (7%)

Query: 475 YGPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           Y P  +   K  I R  + G I Q+     S   A  +    +     M    +   + R
Sbjct: 384 YSP--DGKGKLMIKRGIEVGHIFQLGTKYSSVMKANVIGESGKAVTTTMGCYGI--GVTR 439

Query: 534 FIGIMIENFKGNLPL----WLSPIQAIVTTITSSAVEYAQEIANLLK----SHHLSIETD 585
            I   IE    +  +     ++P Q ++  I  +     + +A+ L        + +  D
Sbjct: 440 IIAAFIEQNHDDKGIIFSQAIAPFQIVIVPINYNKSTRVKALADRLYQQFIKASIDVLLD 499

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
            R E +     +  +  IP  I+  D  A   S+  +    T   +V   DA+  +  + 
Sbjct: 500 DRKEHVGIMFADSELLGIPHRIVISDTHADNGSVEYKARNKTNKIEVKFDDALSFIQTKM 559

Query: 646 L 646
           +
Sbjct: 560 I 560


>gi|262044730|ref|ZP_06017778.1| proline-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
 gi|259037920|gb|EEW39143.1| proline-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
          Length = 572

 Score =  151 bits (382), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 52/249 (20%), Positives = 99/249 (39%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       +SE   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTLKETPADSEVISHQLMLRAGMIRKLA---SGLYTWLPTGVRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E+  P V    LWQ+SG W+ Y   +  +    D     R F L P +    
Sbjct: 60  EMNNAGAIEVLMPVVQPSELWQESGRWEQYGPELLRIADRGD-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLIRNELNSYKQLPLNFYQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHTSQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   G +   V+  T       S      A++    V+ +  +     I
Sbjct: 174 YDAMYAAYSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVIFSDSSDYAANI 233

Query: 464 NTGVLLGEG 472
                +   
Sbjct: 234 EFAEAVAPK 242



 Score = 84.1 bits (206), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 55/167 (32%), Gaps = 13/167 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE---- 540
           I R  + G I Q+         A             ++    +G  + R +   IE    
Sbjct: 405 IKRGIEVGHIFQLGTKYSEAMKAAVQGEDG---RNQILTMGCYGIGVTRVVAAAIEQNFD 461

Query: 541 NFKGNLPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +     P  ++P Q  +  +         E A+++   L +  + +  D R E       
Sbjct: 462 DRGIVWPDAIAPFQVAILPMNMHKSYRVQELAEKLYAELSAQGIEVLMDDRKERPGVMFA 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  +  IP  I+ GD+      I  +   +   Q +   D +  L K
Sbjct: 522 DMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVEYLVK 568


>gi|307262323|ref|ZP_07543971.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 12
           str. 1096]
 gi|306867986|gb|EFM99814.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 12
           str. 1096]
          Length = 571

 Score =  151 bits (381), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 54/263 (20%), Positives = 101/263 (38%), Gaps = 11/263 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q   +       +++   H+ + R   +  +A   SG+  W   G K+ + + + +R 
Sbjct: 3   TSQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMA---SGLYNWLPTGIKVLKKVENIIRE 59

Query: 286 KIKDD-YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LWQ+SG W+ Y A +             R F L P +    
Sbjct: 60  EMNKGGAIEVLMPVVQPAELWQESGRWNDYGAELLRFVDRGS-----RDFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP+ L +  + +R+E      G+MR R F   DA+ F   +    E 
Sbjct: 115 TDLVRREVSSYKQLPLNLYQIQTKFRDEVRPRF-GVMRSREFVMKDAYSFHVDKASLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++ +  +I+   G +   V+  T       S      A +    V+ + ++     I
Sbjct: 174 YDVMYQVYSNIFTRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVFSTESDFAANI 233

Query: 464 NTGVLLGEGAFYGPKFEYILKDA 486
                +  G    P  E  L D 
Sbjct: 234 ELAEAVAVGERQAPTAEMQLVDT 256



 Score = 92.2 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 63/168 (37%), Gaps = 14/168 (8%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           I R  + G I Q+         A       +   P+++    +G  + R +   IE +  
Sbjct: 403 IKRGIEVGHIFQLGTKYSEAMKATVQGEDGK---PLVMTMGCYGIGVTRVVAAAIEQHHD 459

Query: 544 GNLPLWL----SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
               +W     +P    +  +    + S  ++++E+   LK+  + +  D R E      
Sbjct: 460 ERGIIWPSDEIAPFTVAIVPMNMHKSESVQQFSEELYRTLKAQGVDVIFDDRKERPGVMF 519

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +  +  +P +++ G+K  +   I  +   +   Q ++    +  L +
Sbjct: 520 ADMELIGVPHMVVIGEKNLANGEIEYKNRRTGEKQMIAKDQLLAFLKE 567


>gi|85859447|ref|YP_461649.1| prolyl-tRNA synthetase [Syntrophus aciditrophicus SB]
 gi|85722538|gb|ABC77481.1| prolyl-tRNA synthetase [Syntrophus aciditrophicus SB]
          Length = 597

 Score =  151 bits (381), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 46/230 (20%), Positives = 89/230 (38%), Gaps = 11/230 (4%)

Query: 217 LSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIF 276
           +    G    ++  L        ++E   H+ + R   +  ++    G+  +   G+++ 
Sbjct: 13  IKNQGGQMRYSEMFLPTEREIPSDAEVVSHQLMLRAGMIRKLSA---GIYSYLPLGYRVL 69

Query: 277 QTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFA 335
           + +   +R ++     +E+  P V    LWQ+SG W+ Y   +   +   D     R + 
Sbjct: 70  RKVEQIIREEMNRAGAQEVYLPMVQPAELWQESGRWEHYGKELLRFRDRHD-----REYC 124

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC 395
           L P +      +  H +K+YR+LP  L +  + +R+E      G+MR R F   DA+ F 
Sbjct: 125 LGPTHEEVITDLVRHEIKTYRQLPKNLYQIQTKFRDEIRPRF-GVMRGREFGMKDAYSFD 183

Query: 396 TKEQMFNECL-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
             E+       K+      I+   G     V+  +       S      A
Sbjct: 184 ADEEGAEISYQKMFEAYKRIFARCGLRFRPVEADSGTIGGSFSHEFMVMA 233



 Score = 86.0 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/162 (17%), Positives = 64/162 (39%), Gaps = 8/162 (4%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G +  +         A Y++ + ++   +++     G+       + +N   N  
Sbjct: 424 RGIEVGHVFKLGTKYSKAMGASYLDKNGKEQI-MIMGCYGIGTGRTVAACIEQNHDENGI 482

Query: 548 LWLSPI---QAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W  PI   Q I+T +     +  E A+ +   L      +  D R+E    K ++  + 
Sbjct: 483 VWPMPISPYQVIITPVNMNDKALAETAERLYESLAGKGAEVLLDDRDERAGVKFKDADLI 542

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            IPI +  G K+ +E  + +R   +  T  V +     ++ +
Sbjct: 543 GIPIRVTVGPKKLAEGKVEVRLRDTGETSDVQVDSVEKMILR 584


>gi|329996732|ref|ZP_08302530.1| proline--tRNA ligase [Klebsiella sp. MS 92-3]
 gi|328539331|gb|EGF65355.1| proline--tRNA ligase [Klebsiella sp. MS 92-3]
          Length = 572

 Score =  151 bits (381), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 51/249 (20%), Positives = 99/249 (39%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGVRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E+  P V    LWQ+SG W+ Y   +  +    D     R F L P +    
Sbjct: 60  EMNNAGAIEVLMPVVQPSELWQESGRWEQYGPELLRIADRGD-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLIRNELNSYKQLPLNFYQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHTSQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   G +   V+  T       S      A++    V+ +  +     I
Sbjct: 174 YDAMYAAYSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVIFSDSSDYAANI 233

Query: 464 NTGVLLGEG 472
                +   
Sbjct: 234 EFAEAVAPK 242



 Score = 84.1 bits (206), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 55/167 (32%), Gaps = 13/167 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE---- 540
           I R  + G I Q+         A             ++    +G  + R +   IE    
Sbjct: 405 IKRGIEVGHIFQLGTKYSEAMKAAVQGEDG---RNQILTMGCYGIGVTRVVAAAIEQNFD 461

Query: 541 NFKGNLPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +     P  ++P Q  +  +         E A+++   L +  + +  D R E       
Sbjct: 462 DRGIVWPDAIAPFQVAILPMNMHKSYRVQELAEKLYAELSAQGIEVLMDDRKERPGVMFA 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  +  IP  I+ GD+      I  +   +   Q +   D +  L K
Sbjct: 522 DMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVEYLVK 568


>gi|298711240|emb|CBJ32460.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 147

 Score =  151 bits (381), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 40/122 (32%), Positives = 70/122 (57%)

Query: 522 MIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLS 581
           M+HRA+FGS+ERF GI++EN  G  PLWL+P Q  +  +T  A +Y  E+ +  K   L 
Sbjct: 1   MLHRAIFGSLERFFGILVENTAGTFPLWLAPEQMRLLPVTDVARDYCLEVQSKFKKAGLR 60

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           ++ D  +E +  +IR    ++IP++ + G+KE +  ++ +R  G      V + + I  +
Sbjct: 61  VKVDRGSERLAKQIRTAEKERIPVMSVVGEKEVAAGTLAVRSRGFGDMGDVPIDELIASM 120

Query: 642 TK 643
            +
Sbjct: 121 LE 122


>gi|260914628|ref|ZP_05921094.1| proline-tRNA ligase [Pasteurella dagmatis ATCC 43325]
 gi|260631227|gb|EEX49412.1| proline-tRNA ligase [Pasteurella dagmatis ATCC 43325]
          Length = 571

 Score =  151 bits (381), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 61/331 (18%), Positives = 116/331 (35%), Gaps = 16/331 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q   +       E+    H+ + R   +  +A   SG+  W   G ++   + + +R 
Sbjct: 3   TSQYLFSTLKETPAEASIVSHQLMLRAGMIRPLA---SGLYTWLPTGLRVLNKVENIIRE 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+         LWQ+SG W+ Y   +   K   D     R F + P N    
Sbjct: 60  EMDKSGALEVKMAVTQPAELWQESGRWEEYGPELLRFKDRGD-----RDFVIGPTNEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +      SY++LP+ L    + +R+E      G+MR R F   DA+ F T  +   + 
Sbjct: 115 TDLIRRECASYKQLPLNLYHIQTKFRDEVRPRF-GVMRSREFVMKDAYSFHTTHECLQKT 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++    +I+   G +   V+  T       S      A++    V+ + ++     I
Sbjct: 174 YDVMYETYSNIFNRLGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFSTESDFAANI 233

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
                +  G    P     L D          ++       +     V   +E+    ++
Sbjct: 234 ELAEAVALGERGAPTEALRLVDTPNAKTIAELVEQFNQPIEKTVKTLVVHATEESGHKLV 293

Query: 524 HRAVFGSIERFIGIMIENFKGNLPLWLSPIQ 554
              V G  E     + E     + +  SP+Q
Sbjct: 294 ALLVRGDHE-----LNEIKAEKVDIVASPLQ 319



 Score = 90.2 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 29/166 (17%), Positives = 62/166 (37%), Gaps = 13/166 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           I R  + G I Q+     +  NA           P  +    +G  + R I   IE +  
Sbjct: 404 IKRGIEVGHIFQLGTKYSAAMNATVQGEDG---RPQTMIMGCYGIGVTRVIAAAIEQHHD 460

Query: 544 GNLPLWL---SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
               +W    +P +  +  +    + S  ++A+E+   L +  + +  D R E       
Sbjct: 461 ERGIIWPENIAPFKVAIVPMNMHKSESVQQFAEELYRTLMAQGVEVIFDDRKERPGVMFA 520

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +  +  +P +I+ G+K   +  I  +   S   + ++    + +L 
Sbjct: 521 DMELIGVPHMIVIGEKNLEKGEIEYKNRRSGEKEMIAKEQLLDVLK 566


>gi|238893191|ref|YP_002917925.1| prolyl-tRNA synthetase [Klebsiella pneumoniae NTUH-K2044]
 gi|238545507|dbj|BAH61858.1| prolyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
          Length = 572

 Score =  151 bits (381), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 51/249 (20%), Positives = 99/249 (39%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGVRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E+  P V    LWQ+SG W+ Y   +  +    D     R F L P +    
Sbjct: 60  EMNNAGAIEVLMPVVQPSELWQESGRWEQYGPELLRIADRGD-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLIRNELNSYKQLPLNFYQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHTSQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   G +   V+  T       S      A++    V+ +  +     I
Sbjct: 174 YDAMYAAYSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVIFSDSSDYAANI 233

Query: 464 NTGVLLGEG 472
                +   
Sbjct: 234 EFAEAVAPK 242



 Score = 83.7 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 55/167 (32%), Gaps = 13/167 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE---- 540
           I R  + G I Q+         A             ++    +G  + R +   IE    
Sbjct: 405 IKRGIEVGHIFQLGTKYSEAMKAAVQGEDG---RNQILTMGCYGIGVTRVVAAAIEQNFD 461

Query: 541 NFKGNLPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +     P  ++P Q  +  +         E A+++   L +  + +  D R E       
Sbjct: 462 DRGIVWPDAIAPFQVAILPMNMHKSYRVQELAEKLYTELSAQGIEVLMDDRKERPGVMFA 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  +  IP  I+ GD+      I  +   +   Q +   D +  L K
Sbjct: 522 DMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVEYLVK 568


>gi|150015022|ref|YP_001307276.1| prolyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
 gi|189083493|sp|A6LPP0|SYP_CLOB8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|149901487|gb|ABR32320.1| prolyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
          Length = 570

 Score =  151 bits (381), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 55/248 (22%), Positives = 100/248 (40%), Gaps = 11/248 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +   ++       E+E   H+ + R   +  +A    GV  +   G K+ + +   +R +
Sbjct: 4   SNMLISTLREVPAEAEIDSHKLMLRAGMIRKMAA---GVYNYMPLGLKVLKKVEDIIREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E     ++   LWQ+SG WD+Y A MF +K   D     R F L P +     
Sbjct: 61  MNAAGAQEFLASAIIPAELWQESGRWDAYGAEMFRLKDRGD-----RDFCLGPTHEEVFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +  + +KSY++LP+ L +  + YR+E      G+MR R F   DA+ F   +   +   
Sbjct: 116 DIARNEIKSYKQLPLNLYQIQTKYRDERRPRF-GVMRSREFVMKDAYSFDKDQGGLDLAY 174

Query: 406 -KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            K+H+  + I+   G +   V   +       S      +E     V+   + +    I 
Sbjct: 175 DKMHDAYVKIFNRCGLDAKCVAADSGAIGGSNSAEFMVKSEVGEDDVVFCSECNYAANIE 234

Query: 465 TGVLLGEG 472
                 E 
Sbjct: 235 KASSPAEK 242



 Score = 87.5 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 57/163 (34%), Gaps = 10/163 (6%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I  +        NA +++    K  P ++     G       I+ ++   N  
Sbjct: 402 RGTEVGHIFKLGTKYSEAMNAKFIDEDG-KEKPFIMGCYGIGVTRTMASIIEQHHDENGI 460

Query: 548 LWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W    +P    V  +          A EI   L S  +    D RNE    K ++  + 
Sbjct: 461 VWPLSVAPYHVSVIPVNVKDEEQARIANEIYEKLTSAGIEALLDDRNERAGVKFKDSELM 520

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            IP+ I  G K  ++  I  +       + + + D   I+  E
Sbjct: 521 GIPMRITVGKK-INDGEIEFKLRDG-EMEVIKIEDVYNIIKGE 561


>gi|169806754|ref|XP_001828121.1| prolyl-tRNA synthetase [Enterocytozoon bieneusi H348]
 gi|161779249|gb|EDQ31273.1| prolyl-tRNA synthetase [Enterocytozoon bieneusi H348]
          Length = 501

 Score =  151 bits (381), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 67/435 (15%), Positives = 143/435 (32%), Gaps = 56/435 (12%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
              +        EE+    + ++  + +L     D  G          I++ + ++   +
Sbjct: 2   DNIQKFGMTVTKEENFYEWYTQIVLKGELVDY-YDIKGCFIIRPNAMGIWKQIQNWFNSE 60

Query: 287 IK-DDYEEINTPQ-VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++  + EE   P  +  +++ ++  H +++   +  +    +   D     ++P +    
Sbjct: 61  LEKRNIEECYFPLLITKKNMEKEKNHLNNFNPELAWITHCGNKKLDD-PVGIRPTSEAIM 119

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
              F   L ++R+LP++L ++ SV R E   +L   +R R F   + H            
Sbjct: 120 YPSFAKWLNTHRDLPLKLNQWCSVLRWEVKSTL-PFIRGREFLWQEGHTV---------Y 169

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            K  +    +         + +         G           +K   +T          
Sbjct: 170 HKQIDAQNEVKDILNLYSYVYEELLAVPVYKG-----------LKSKNETFG-------- 210

Query: 465 TGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIH 524
                  GA Y    E  + +  GR  Q  T     +  S+     VN          ++
Sbjct: 211 -------GAEYTLSLEAFIPET-GRGIQAATSHHLGDNFSKIFDIKVNDDKYPGSKSFVY 262

Query: 525 RAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVT----------TITSSAVEYAQE 570
           +  +G   R IGI       N     SP    IQ ++               S  +YA  
Sbjct: 263 QNSWGLTTRAIGIAAMIHSDNKGFVCSPRVAHIQVVIILCGIKKTHTPNEIDSLKKYANN 322

Query: 571 IANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           I   LK H++ +  D ++  ++ +K     +K +P+    G  + ++  +   R  +   
Sbjct: 323 IQYELKKHNIRVLIDDKDNQSVGFKFNNWELKGVPLRFEIGFNDMNKEEVCCVRRDTGEK 382

Query: 630 QKVSLLDAIPILTKE 644
           +       I +   E
Sbjct: 383 KSFHTSRIIELTQLE 397


>gi|152968789|ref|YP_001333898.1| prolyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
 gi|166980131|sp|A6T4Z7|SYP_KLEP7 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|150953638|gb|ABR75668.1| prolyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
          Length = 572

 Score =  151 bits (381), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 51/249 (20%), Positives = 99/249 (39%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGVRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E+  P V    LWQ+SG W+ Y   +  +    D     R F L P +    
Sbjct: 60  EMNNAGAIEVLMPVVQPSELWQESGRWEQYGPELLRIADRGD-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLIRNELNSYKQLPLNFYQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHTSQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   G +   V+  T       S      A++    V+ +  +     I
Sbjct: 174 YDAMYAAYSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVIFSDSSDYAANI 233

Query: 464 NTGVLLGEG 472
                +   
Sbjct: 234 EFAEAVAPK 242



 Score = 84.1 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 55/167 (32%), Gaps = 13/167 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE---- 540
           I R  + G I Q+         A             ++    +G  + R +   IE    
Sbjct: 405 IKRGIEVGHIFQLGTKYSEAMKAAVQGEDG---RNQILTMGCYGIGVTRVVAAAIEQNFD 461

Query: 541 NFKGNLPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +     P  ++P Q  +  +         E A+++   L +  + +  D R E       
Sbjct: 462 DRGIVWPDAIAPFQVAILPMNMHKSYRVQELAEKLYAELSAQGIEVLMDDRKERPGVMFA 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  +  IP  I+ GD+      I  +   +   Q +   D +  L K
Sbjct: 522 DMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVEYLVK 568


>gi|159036838|ref|YP_001536091.1| prolyl-tRNA synthetase [Salinispora arenicola CNS-205]
 gi|157915673|gb|ABV97100.1| prolyl-tRNA synthetase [Salinispora arenicola CNS-205]
          Length = 468

 Score =  151 bits (381), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 67/406 (16%), Positives = 138/406 (33%), Gaps = 53/406 (13%)

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
            R ++ L  +  L         ++     G+ I++ + + M  +IK    E    P  + 
Sbjct: 13  PRWYQDLIAKAKLADNGPVRGTMVI-RPAGYAIWERMQAEMDNRIKASGAENAYFPLFIP 71

Query: 302 QHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +   + ++ H + +   +  V              ++P +           + SYR+LP+
Sbjct: 72  EDHLKREAEHVEGFSPELAVVTHGGGKQL-AEPVVVRPTSETVIGEFMAKWIDSYRDLPL 130

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
            L ++ +V R E        +R   F   + H      Q      +              
Sbjct: 131 LLNQWANVVRWELRP--RIFLRTSEFLWQEGHTAHATRQDARAYARKI------------ 176

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
                              L +  E++M  VL       Q  + T      GA      E
Sbjct: 177 -------------------LHEAYEDLMVNVL---AIPVQVGLKTARERFAGATATYTLE 214

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNA-FYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
            ++ D  G+  Q GT      L   F+  F +N  S      +     +G+  R +G +I
Sbjct: 215 GMMGD--GKALQLGTSH---ELGQNFSLAFGINYTSATGGVELAWTTSWGTSTRMLGGLI 269

Query: 540 ----ENFKGNLPLWLSPIQAIVTTITSS--AVEYAQEIANLLKSHHLSIETDFRNETI-N 592
               ++    +P  L+P+QA V  +       E A  + + L+   + +  D R +T   
Sbjct: 270 MCHGDDNGLRVPPKLAPVQAYVMVVKDGEGVAEAAGRLHDGLRDAGVRVALDDRTDTPFG 329

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
            +  +  ++  P+ +  G ++ +  +  + R    +   V + D +
Sbjct: 330 RRAVDAELRGYPVRVEIGPRDLAAGNAVVVRRTDGSKSPVPVADVV 375


>gi|303252707|ref|ZP_07338869.1| prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|307248901|ref|ZP_07530912.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. S1536]
 gi|302648446|gb|EFL78640.1| prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|306854596|gb|EFM86788.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. S1536]
          Length = 571

 Score =  151 bits (381), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 64/329 (19%), Positives = 117/329 (35%), Gaps = 17/329 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q   +       +++   H+ + R   +  +A   SG+  W   G K+ + + + +R 
Sbjct: 3   TSQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMA---SGLYNWLPTGIKVLKKVENIIRE 59

Query: 286 KIKDD-YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LWQ+SG W+ Y A +             R F L P +    
Sbjct: 60  EMNKGGAIEVLMPVVQPAELWQESGRWNDYGAELLRFVDRGS-----RDFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP+ L +  + +R+E      G+MR R F   DA+ F   +    E 
Sbjct: 115 TDLVRREVSSYKQLPLNLYQIQTKFRDEVRPRF-GVMRSREFVMKDAYSFHVDKASLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++ +  +I+   G +   V+  T       S      A +    V+ + ++     I
Sbjct: 174 YDVMYQVYSNIFTRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVFSTESDFAANI 233

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
                +  G    P  E  L D          +   FNLP       +          ++
Sbjct: 234 ELAEAVAVGERQAPTAEMQLVDT-PNAKTINELVEQFNLPIEKTVKTLIVKGAIEEQPLV 292

Query: 524 HRAVFGSIERFIGIMIENFKGNLPLWLSP 552
              + G  E     + E      PL   P
Sbjct: 293 ALVLRGDHE-----LNEIKAQKHPLVADP 316



 Score = 90.2 bits (222), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 63/168 (37%), Gaps = 14/168 (8%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           I R  + G I Q+         A       +   P+++    +G  + R +   IE +  
Sbjct: 403 IKRGIEVGHIFQLGTKYSEAMKATVQGEDGK---PLVMTMGCYGIGVTRVVAAAIEQHHD 459

Query: 544 GNLPLWL----SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
               +W     +P    +  +    + S  ++++E+   LK+  + +  D R E      
Sbjct: 460 DRGIIWPSDEIAPFTVAIVPMNMHKSESVQQFSEELYRTLKAQDVDVIFDDRKERPGVMF 519

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +  +  +P +++ G+K  +   I  +   +   Q ++    +  L +
Sbjct: 520 ADMELIGVPHMVVIGEKNLANGEIEYKNRRTGEKQMIAKDQLLAFLKE 567


>gi|186680962|ref|YP_001864158.1| prolyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
 gi|226701314|sp|B2J707|SYP_NOSP7 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|186463414|gb|ACC79215.1| prolyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
          Length = 604

 Score =  151 bits (381), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 56/243 (23%), Positives = 96/243 (39%), Gaps = 8/243 (3%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q           ++E   H+ L R   +  I   GSG+  +    W++ Q +   +R +
Sbjct: 4   SQMLFVTLRDDPADAEIPSHKLLLRAGYIRRI---GSGLYAYLPLMWRVLQKVSQIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E   PQ+    LW++SG WD+Y      +    D  +  +   L P +     
Sbjct: 61  MNATGAQECLLPQLQPADLWKESGRWDTYTKAEGIMFSLID--RREQQLGLGPTHEEVIT 118

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           A+    ++SYR+LP+ L +  + +R+E      GLMR R F   D + F T E    E  
Sbjct: 119 AIARDMIRSYRQLPLHLYQIQTKFRDEIRPRF-GLMRGREFIMKDGYSFHTDEASLKETY 177

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
           + ++    +I +  G     V+  +      GS      AE     VL T        + 
Sbjct: 178 QDMYKAYSNILRRSGLAFRAVEADSGAIGGSGSTEFMILAEAGEDEVLYTEDGKYAANVE 237

Query: 465 TGV 467
             V
Sbjct: 238 KAV 240



 Score = 85.2 bits (209), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 34/181 (18%), Positives = 69/181 (38%), Gaps = 11/181 (6%)

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
            G+ A + P  E  L+ A G +      Q+         A Y N   E+  P+++     
Sbjct: 419 PGDRAIHNP--EQTLQSARGIE-AGHIFQLGTKYSQAMGATYTNEQGEEK-PLLMGCFGV 474

Query: 529 GSIERFIGIMIENFKGNLPLWL---SPIQAIV-TTITSS--AVEYAQEIANLLKSHHLSI 582
           G        + +++  +  +W    +P  AIV          VE AQ++   L    +  
Sbjct: 475 GVSRLAQAAVEQSYDNDGIIWPVAIAPYHAIVTIPNIKDAQQVEVAQKLYTELNQAGIET 534

Query: 583 ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             D R+E    K ++  +  IP  I+ G +  +   + +    +  +Q++ + +    L 
Sbjct: 535 LLDDRDERAGVKFKDADLIGIPYRIVTG-RAIANGKVEVVERATRKSQEIVIDEVTTTLQ 593

Query: 643 K 643
           +
Sbjct: 594 Q 594


>gi|33594237|ref|NP_881881.1| prolyl-tRNA synthetase [Bordetella pertussis Tohama I]
 gi|81836185|sp|Q7VTZ8|SYP_BORPE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|33564312|emb|CAE43613.1| prolyl-tRNA synthetase [Bordetella pertussis Tohama I]
 gi|332383651|gb|AEE68498.1| prolyl-tRNA synthetase [Bordetella pertussis CS]
          Length = 576

 Score =  151 bits (381), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 51/247 (20%), Positives = 93/247 (37%), Gaps = 11/247 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  L        E+E   H+ + R   +  +A    G+  +   G K+ + +   +R 
Sbjct: 3   ASKYHLNTLKEAPAEAEIASHQLMTRAGMIRKLA---GGIYTYMPLGLKVIRKIEGIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LW +SG W+ Y A +  +K      +  R F L+P +    
Sbjct: 60  EMNAAGAIELLMPVVQPAELWMESGRWEQYGAELLRIKD-----RHQRDFVLQPTSEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + ++SYR+LP+      + +R+E      GLMR R FT  DA+ F   E      
Sbjct: 115 TDIARNEIQSYRQLPLNFYHIQTKFRDERRPRF-GLMRGREFTMKDAYSFDRDEAGAQRS 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I++  G E   V   T       S      A+     ++   ++     I
Sbjct: 174 YDIMYAAYQRIFQRLGLEFRAVAADTGSIGGSRSHEFQVIADTGEDLIVYNPESDYAANI 233

Query: 464 NTGVLLG 470
                  
Sbjct: 234 ELAEAPA 240



 Score = 81.8 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 22/162 (13%), Positives = 62/162 (38%), Gaps = 13/162 (8%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN- 545
           R  + G +  +         A +++ + +   P ++    +G  + R +G  IE      
Sbjct: 410 RGIEVGHVFFLGTKYSEALKATFLDDNGK---PAVLQMGCYGIGVTRIVGAAIEQNHDAR 466

Query: 546 ---LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
               P  ++P + ++  +    + +  + A  +   L++  + +  D R+        E 
Sbjct: 467 GIIWPRAIAPYEVVICPVGWGKSETVRDTALALYEALRARGVDVMLDDRDSRPGVMFAEW 526

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
            +  +P+ +  G++  +E  + ++        KV +  A+  
Sbjct: 527 ELIGVPLRVTVGERGLNEGVVELQARREAEAAKVPVDQALAQ 568


>gi|33603207|ref|NP_890767.1| prolyl-tRNA synthetase [Bordetella bronchiseptica RB50]
 gi|81836865|sp|Q7WFN9|SYP_BORBR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|33568838|emb|CAE34596.1| prolyl-tRNA synthetase [Bordetella bronchiseptica RB50]
          Length = 576

 Score =  151 bits (381), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 51/247 (20%), Positives = 93/247 (37%), Gaps = 11/247 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  L        E+E   H+ + R   +  +A    G+  +   G K+ + +   +R 
Sbjct: 3   ASKYHLNTLKEAPAEAEIASHQLMTRAGMIRKLA---GGIYTYMPLGLKVIRKIEGIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LW +SG W+ Y A +  +K      +  R F L+P +    
Sbjct: 60  EMNAAGAIELLMPVVQPAELWMESGRWEQYGAELLRIKD-----RHQRDFVLQPTSEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + ++SYR+LP+      + +R+E      GLMR R FT  DA+ F   E      
Sbjct: 115 TDIARNEIQSYRQLPLNFYHIQTKFRDERRPRF-GLMRGREFTMKDAYSFDRDEAGAQRS 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I++  G E   V   T       S      A+     ++   ++     I
Sbjct: 174 YDIMYAAYQRIFQRLGLEFRAVAADTGSIGGSRSHEFQVIADTGEDLIVYNPESDYAANI 233

Query: 464 NTGVLLG 470
                  
Sbjct: 234 ELAEAPA 240



 Score = 81.8 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 22/162 (13%), Positives = 62/162 (38%), Gaps = 13/162 (8%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN- 545
           R  + G +  +         A +++ + +   P ++    +G  + R +G  IE      
Sbjct: 410 RGIEVGHVFFLGTKYSEALKATFLDDNGK---PAVLQMGCYGIGVTRIVGAAIEQNHDAR 466

Query: 546 ---LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
               P  ++P + ++  +    + +  + A  +   L++  + +  D R+        E 
Sbjct: 467 GIIWPRAIAPYEVVICPVGWGKSETVRDTALALYEALRARGVDVMLDDRDSRPGVMFAEW 526

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
            +  +P+ +  G++  +E  + ++        KV +  A+  
Sbjct: 527 ELIGVPLRVTVGERGLNEGVVELQARREAEAAKVPVDQALAQ 568


>gi|302667978|ref|XP_003025567.1| hypothetical protein TRV_00207 [Trichophyton verrucosum HKI 0517]
 gi|291189682|gb|EFE44956.1| hypothetical protein TRV_00207 [Trichophyton verrucosum HKI 0517]
          Length = 613

 Score =  151 bits (381), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 87/419 (20%), Positives = 160/419 (38%), Gaps = 68/419 (16%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHL-WQQSGHWDSYRAN 317
            D SG        + I++ + S+   KIK  + +  + P  + + +  ++  H + + A 
Sbjct: 116 YDVSGCFVLKPHSFFIWEQIQSWFDAKIKQMNVKNCSFPLFVSEDVLKKEKDHIEGFAAE 175

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           +  V  A ++  + +  A++P +       +   ++S+R+LP++L ++ SV R E     
Sbjct: 176 VAWVTHAGNSPLEKK-IAIRPTSETVMYPYYAKWIRSHRDLPLKLNQWNSVVRWEFKNP- 233

Query: 378 HGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
              +R R F   + H    T+E+   E L+I      +Y++     ++    T  EK  G
Sbjct: 234 QPFLRTREFLWQEGHTAHLTREEAHTEVLQILQHYAHVYEELLAVPVIQGQKTDKEKFAG 293

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
                                                 Y    E  +  A GR  Q GT 
Sbjct: 294 G------------------------------------LYTTTVEGYIP-ATGRGIQGGTS 316

Query: 497 Q-VDFNLPSRFNAFYVNSH---SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
             +  N    F     +      EK  P+ + +  +G   R IG+M+     N  L L P
Sbjct: 317 HGLGQNFSKMFGITVEDPSARPDEKKPPLHVWQNSWGLSTRTIGVMVMIHGDNRGLVLPP 376

Query: 553 ----IQAIVTTITSSA----VEYA------QEIANLLKSHHLSIETDFRNE-TINYKIRE 597
               IQ ++  +   A     E A      + IA +L +  + +E D R+  T  +K  +
Sbjct: 377 RVADIQTVIVPVGLGAKTPDEERAAIMAEIEAIATVLSAAGVRVEVDKRDGYTPGWKFND 436

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRF------GSTTTQKVSLLDAIPILTKESLPPDC 650
             +K IP+ +  G  E++   +   R       G ++ Q   L  A+P L  E++  D 
Sbjct: 437 WELKGIPLRLEFGPGESAGSFVTTSRRDIAGKEGKSSIQIKDLGTAVPALL-ETIQADL 494


>gi|91774775|ref|YP_544531.1| prolyl-tRNA synthetase [Methylobacillus flagellatus KT]
 gi|123254834|sp|Q1H497|SYP_METFK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|91708762|gb|ABE48690.1| prolyl-tRNA synthetase [Methylobacillus flagellatus KT]
          Length = 573

 Score =  151 bits (381), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 47/235 (20%), Positives = 96/235 (40%), Gaps = 12/235 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L       +E+E   H+ + R   +  +   GSG+  W   G ++ + + + +R 
Sbjct: 3   ASQFFLATQKEAPQEAELASHKLMLRAGLIKRL---GSGLYSWMPLGLRVLRKVETIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V  + LW+++G W  +   M  ++      +  R F   P +    
Sbjct: 60  EMNRAGALELLMPAVQPKELWEETGRWAVFGPQMLKIRD-----RHERDFCFGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
             +    ++SY++LP+   +  + +R+E      G+MR R F   D + F T  E +   
Sbjct: 115 TDIARREIRSYKQLPLNFYQIQTKFRDEIRPRF-GVMRAREFVMKDGYSFHTSLESLQQT 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNS 458
              ++    +I+   G +   V+  T      GS      A +  +  L   ++S
Sbjct: 174 YDTMYQAYSNIFNRLGLKFRAVRADTGAIGGDGSHEFHVLA-DSGEDALAYCEHS 227



 Score = 83.7 bits (205), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 30/165 (18%), Positives = 63/165 (38%), Gaps = 13/165 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN- 545
           R  + G I Q+         A Y++ + +K     +    +G  + R +G  IE      
Sbjct: 410 RGIEVGHIFQLRTKYTEAMEATYLDENGQKQ---FMEMGCYGIGVSRIVGAAIEQGNDER 466

Query: 546 ---LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
               P  ++P    +  I    + +    A  + + L +  + +  D R E       + 
Sbjct: 467 GIIFPAAMAPFSVAIAPIGYDKSEAVQSAAHALYDELSALGIDVLLDDRGERPGVMFADL 526

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +  IP  I+ GD+   E  +  +   + + + V+L D + I+ +
Sbjct: 527 ELIGIPHRIVIGDRGLKEGQVEYQARTAASAETVALADIVSIVRQ 571


>gi|167856063|ref|ZP_02478806.1| prolyl-tRNA synthetase [Haemophilus parasuis 29755]
 gi|219871797|ref|YP_002476172.1| prolyl-tRNA synthetase [Haemophilus parasuis SH0165]
 gi|254782903|sp|B8F7C2|SYP_HAEPS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|167852812|gb|EDS24083.1| prolyl-tRNA synthetase [Haemophilus parasuis 29755]
 gi|219692001|gb|ACL33224.1| prolyl-tRNA synthetase [Haemophilus parasuis SH0165]
          Length = 571

 Score =  151 bits (381), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 54/263 (20%), Positives = 101/263 (38%), Gaps = 11/263 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q   +       +++   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLFSTLKETPNDAQVVSHQLMLRAGMIRPLA---SGMYNWLPTGLRVLKKVENIIRE 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LW +S  W+ Y   +   K   D     R F L P +    
Sbjct: 60  EMNKSGALEVEMPVVQPADLWVESERWEDYGPELLRFKDRGD-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP+ L +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLVRREVSSYKQLPLNLYQIQTKFRDEVRPRF-GVMRGREFLMKDAYSFHTSKESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +H    +I+   G +   V   T       S      A++    V+ + ++     I
Sbjct: 174 YDVMHQTYSNIFTRLGLDFRPVAADTGSIGGSASHEFQVLAQSGEDDVVFSTESDYAANI 233

Query: 464 NTGVLLGEGAFYGPKFEYILKDA 486
                +  G    P  E  L D 
Sbjct: 234 ELAEAIAVGERQAPTAEMTLVDT 256



 Score = 90.6 bits (223), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 57/167 (34%), Gaps = 14/167 (8%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           I R  + G I Q+         A           P  +    +G  + R +   IE +  
Sbjct: 403 IKRGIEVGHIFQLGTKYSEAMKATVQGEDG---RPQTMIMGCYGIGVTRVVAAAIEQHHD 459

Query: 544 GNLPLWL----SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
               +W     +P    V  +    + S   +A+++   L+S  + +  D R E      
Sbjct: 460 ERGIIWPTDAIAPFTVAVVPMNMHKSESVQTFAEDLYKTLRSQGVDVIFDDRKERPGVMF 519

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +  +  +P +++ G+K      I  +   +   Q ++    +  L 
Sbjct: 520 ADMELIGVPHMLVIGEKNLENGEIEYKNRRTGEKQMIAKDQLLDFLK 566


>gi|322515550|ref|ZP_08068532.1| proline--tRNA ligase [Actinobacillus ureae ATCC 25976]
 gi|322118393|gb|EFX90656.1| proline--tRNA ligase [Actinobacillus ureae ATCC 25976]
          Length = 571

 Score =  151 bits (381), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 64/329 (19%), Positives = 118/329 (35%), Gaps = 17/329 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q   +       +++   H+ + R   +  +A   SG+  W   G K+ + + + +R 
Sbjct: 3   TSQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMA---SGLYNWLPTGIKVLKKVENIIRE 59

Query: 286 KIKDD-YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LWQ+SG W+ Y A +             R F L P +    
Sbjct: 60  EMNKGGAIEVLMPVVQPAELWQESGRWNDYGAELLRFVDRGS-----RDFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP+ L +  + +R+E      G+MR R F   DA+ F  ++    E 
Sbjct: 115 TDLVRREVSSYKQLPLNLYQIQTKFRDEVRPRF-GVMRSREFVMKDAYSFHVEKASLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++ +  +I+   G +   V+  T       S      A +    V+ + ++     I
Sbjct: 174 YDVMYQVYSNIFTRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVFSTESDFAANI 233

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
                +  G    P  E  L D          +   FNLP       +          ++
Sbjct: 234 ELAEAVAVGERQAPTAEMQLVDT-PNAKTINELVEQFNLPIEKTVKTLIVKGATEEQPLV 292

Query: 524 HRAVFGSIERFIGIMIENFKGNLPLWLSP 552
              + G  E     + E      PL   P
Sbjct: 293 ALVLRGDHE-----LNEIKAQKHPLVADP 316



 Score = 88.7 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 25/168 (14%), Positives = 61/168 (36%), Gaps = 14/168 (8%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           I R  + G I Q+         A       +   P+++    +G  + R +   IE +  
Sbjct: 403 IKRGIEVGHIFQLGTKYSEAMKATVQGEDGK---PLVMTMGCYGIGVTRVVAAAIEQHHD 459

Query: 544 GNLPLWL----SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
               +W     +P    +  +    + S  ++++E+   LK+  + +  D R E      
Sbjct: 460 DRGIIWPSDEIAPFTVAIVPMNMHKSESVQQFSEELYRSLKAQGVDVIFDDRKERPGVMF 519

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +  +  +P +++ G+K      I  +   +     ++    +  L +
Sbjct: 520 ADMELIGVPHMVVIGEKNLVNGEIEYKNRRTGEKSMITKDQLLAFLKE 567


>gi|307330032|ref|ZP_07609183.1| prolyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113]
 gi|306884293|gb|EFN15328.1| prolyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113]
          Length = 471

 Score =  151 bits (381), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 65/415 (15%), Positives = 156/415 (37%), Gaps = 56/415 (13%)

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
            R ++ +  + +L         ++     G+ +++ +   M  +IK    +    P  + 
Sbjct: 15  PRWYQDVINKAELADNGPVRGTMVI-RPYGYGLWERMQQDMDARIKAVGVQNAYFPLFIP 73

Query: 302 QHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           Q    +++ H + +   +  V        +     ++P +       F+  ++SYR+LP+
Sbjct: 74  QSYLAKEADHVEGFAPELAVVTHGGGKELE-EPVVVRPTSETIVNEYFSKWVQSYRDLPL 132

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
            + ++ +V R E    L   +R   F   + H                            
Sbjct: 133 LINQWANVVRWELRPRL--FLRTTEFLWQEGHTAHAS----------------------- 167

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
                + +     R+  +      E+++   +   + ++++R         GA      E
Sbjct: 168 ----YEDARDFAARIHREVYARFMEDVLAMDVVLGRKTARERF-------AGALNTLTLE 216

Query: 481 YILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
            ++ D  G+  Q GT   +  N    F+  Y++   E+    ++ +  +GS  R +G ++
Sbjct: 217 GMMGD--GKALQLGTSHELGQNFARAFHTSYLSKDGEQE---LVWQTSWGSTTRMVGALV 271

Query: 540 ----ENFKGNLPLWLSPIQAIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETI-N 592
               ++    +P  L+ IQ +V  I    + +   +EI  LL +  + +  D R +T   
Sbjct: 272 MMHGDDNGLRIPPRLASIQVVVLAIKGDDAVLAKVREIGELLSAAGVRVHVDDRTDTPFG 331

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRF--GSTTTQKVSLL-DAIPILTKE 644
            +  +  +K +P+ +  G ++    +  + R   G     +  LL + +P + +E
Sbjct: 332 RRAVDWELKGVPVRVEVGPRDLESGTAMVARRIPGGKEPVRAELLPELLPKVLEE 386


>gi|85711988|ref|ZP_01043042.1| Prolyl-tRNA synthetase [Idiomarina baltica OS145]
 gi|85694174|gb|EAQ32118.1| Prolyl-tRNA synthetase [Idiomarina baltica OS145]
          Length = 569

 Score =  151 bits (381), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 58/305 (19%), Positives = 116/305 (38%), Gaps = 14/305 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + +   +R +
Sbjct: 4   SQYLLSTLKETPSDAEIVSHQLMLRAGMIRKVA---SGLYTWTPTGLRVLKKVERVVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++  +  EI  P V    LWQ+SG W+ Y   +  +K      +  R F L P +     
Sbjct: 61  MERINALEILMPMVQPADLWQESGRWEDYGPELLRIKD-----RHERDFLLGPTHEEIIS 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNEC 404
            +    + SY++LP+ L +  + +R+E      G+MR R F   DA+ F  T E +    
Sbjct: 116 ELVRKEVSSYKQLPLTLFQIQTKFRDEIRPRF-GVMRAREFMMKDAYSFHLTDESLQQAY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            ++++    I++  G +   V   T       S      A +    +  +  +     + 
Sbjct: 175 DEMYDAYCRIFQRLGLDFRPVIADTGSIGGHASHEFHVLAGSGEDAIAFSDGSDYAANVE 234

Query: 465 TGVLLGEGAFYG-PKFEYILKDAIGRDWQ--CGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
               +        P  +  + D  G +       + VD     +      +   E    +
Sbjct: 235 MAEAIAPKKERSQPSQDKQVHDVTGHEVSAFLQPLAVDAQQAVQCTLVKASDEVEADAVM 294

Query: 522 MIHRA 526
           ++ RA
Sbjct: 295 LVWRA 299



 Score = 81.0 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 55/163 (33%), Gaps = 9/163 (5%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE----NFKG 544
           R  + G I       S      V S + K   + +     G   R +   IE    +   
Sbjct: 403 RGIEVGHIFQLGKKYSNAMKVGVLSETGKHETLTMGCYGIGVS-RVVAAAIEQFHDDRGI 461

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIAN----LLKSHHLSIETDFRNETINYKIREHSI 600
           N P  L+P +  +  +        Q++AN     L+     +  D R E       +  +
Sbjct: 462 NWPNELAPFEVAIVPMNMHKSARVQKVANELYQQLRDAGFDVLFDDRKERPGVMFTDMEL 521

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             +P  I+ G++   E  +  +       QK+ +   +  L +
Sbjct: 522 IGVPHQIVIGERNLDEEMVEYQSRSDRDKQKMPINSVLEFLNQ 564


>gi|224134713|ref|XP_002327471.1| predicted protein [Populus trichocarpa]
 gi|222836025|gb|EEE74446.1| predicted protein [Populus trichocarpa]
          Length = 448

 Score =  151 bits (381), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 64/371 (17%), Positives = 138/371 (37%), Gaps = 59/371 (15%)

Query: 270 RKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHL-WQQSGHWDSYRANMFAVKCADDT 327
             G+ I++ +  Y+  K K+  +  +  PQ +      +++ H + +   +  V      
Sbjct: 5   PYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPFSFIEKEASHVEGFSPELALVTIGGGK 64

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
             + +   ++P +      +F   + SYR+LP+ + ++ +V R E        +R   F 
Sbjct: 65  ELEEK-LVVRPTSETIVNHMFTQWIHSYRDLPLMVNQWANVTRWEMR--TKPFVRTLEFL 121

Query: 388 QDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
             + H      E+  NE L++ ++      +     ++    ++ E   G+D  +     
Sbjct: 122 WQEGHTAHANPEEAENEALQMIDVYTKFAYEQAAIPVIAGRKSKAETFAGADRTY----- 176

Query: 447 IMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSR 505
                                            E ++ D   +  Q GT   +  N    
Sbjct: 177 -------------------------------TIEAMMGDR--KALQAGTSHNLGQNFSRA 203

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTIT 561
           F   +++ + E+ H   + +  +    RFIG +I     +    LP  ++PIQ ++  I 
Sbjct: 204 FGTQFMDENGERQH---VWQTSWAVSTRFIGGIIMTHGDDSGLMLPPKIAPIQVVIVPIW 260

Query: 562 SSAVEY------AQEIANLLKSHHLSIETDFRN-ETINYKIREHSIKKIPIIIICGDKEA 614
               E       A  +  +L+S  + ++ D  +  T  +K     +K +P+ I  G ++ 
Sbjct: 261 KKEDEKTGVLNAASSVKKVLQSAGIKVKLDDTDQRTPGWKFNFWEMKGVPLRIEIGPRDV 320

Query: 615 SERSIGIRRFG 625
           S  S+ I R  
Sbjct: 321 SSASVVISRRD 331


>gi|163854968|ref|YP_001629266.1| prolyl-tRNA synthetase [Bordetella petrii DSM 12804]
 gi|226699121|sp|A9I4I5|SYP_BORPD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|163258696|emb|CAP40995.1| proS [Bordetella petrii]
          Length = 576

 Score =  151 bits (381), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 51/217 (23%), Positives = 90/217 (41%), Gaps = 11/217 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +   L        E+E   HR + R   +  +A    G+  +   G K+ + + + +R 
Sbjct: 3   ASTYHLNTLKEAPAEAEVASHRLMTRAGMIRKLA---GGIYTYMPLGLKVIRKIEAIVRA 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LWQ+SG W+ Y A +  +K      +  R F L+P +    
Sbjct: 60  EMDAAGAIELLMPVVQPAELWQESGRWEQYGAELLRIKD-----RHQRDFVLQPTSEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + + SYR+LP+      + +R+E      GLMR R FT  DA+ F   E    + 
Sbjct: 115 TDIARNEIHSYRQLPLNFYHIQTKFRDERRPRF-GLMRGREFTMKDAYSFDRDEAGAQQS 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
             K+++  + I++  G +   V   T       S   
Sbjct: 174 YDKMYDAYMRIFERLGLQFRAVAADTGSIGGSRSHEF 210



 Score = 73.7 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 60/170 (35%), Gaps = 12/170 (7%)

Query: 484 KDAIGRDWQCGTIQVDFNL---PSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMI 539
            D  GR      I+V            A       E   P ++    +G  I R  G  I
Sbjct: 400 PDGAGRLAIQRGIEVGHVFFLGTKYSEALKATFLDETGKPALLQMGCYGIGITRIAGAAI 459

Query: 540 ENFKGN----LPLWLSPIQAIVTTITSSAVEYAQ----EIANLLKSHHLSIETDFRNETI 591
           E          P  ++P + ++  +     E  +    ++ + L++  + +  D R+   
Sbjct: 460 EQNHDERGIIWPRAIAPFEVVICPVGWGKNETVRNESVKLYDALRARGVDVILDDRDARP 519

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
                E  +  +P+ +  G++  ++  + ++    +T  K+    A+  +
Sbjct: 520 GVMFAEWELIGVPLRVTVGERGLNDGVVELQARRESTAAKIPAGSALEQV 569


>gi|308190360|ref|YP_003923291.1| proline--tRNA ligase [Mycoplasma fermentans JER]
 gi|319777760|ref|YP_004137411.1| prolyl-tRNA synthetase [Mycoplasma fermentans M64]
 gi|307625102|gb|ADN69407.1| proline--tRNA ligase [Mycoplasma fermentans JER]
 gi|318038835|gb|ADV35034.1| Prolyl-tRNA synthetase [Mycoplasma fermentans M64]
          Length = 478

 Score =  151 bits (381), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 67/422 (15%), Positives = 149/422 (35%), Gaps = 61/422 (14%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
           LE+   + +  + ++ +L         ++F     + I++ +   +    ++   + +  
Sbjct: 10  LEQDFAKWYTDVVKQGNLIAYGPVKGTIVF-KPNSYGIWEQIQKNLNECFREKGVQNVYL 68

Query: 297 PQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P ++ + L+ ++  H   +   +  +    D   D + F ++P +      +F + ++SY
Sbjct: 69  PLLIPEKLFNKEKDHIAGFNPELATITKVGDKDLDEKVF-IRPTSEVLFADLFKNSIESY 127

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISI 414
           ++LP+   ++ +V R E   + +  +R R F   + H       +       + +     
Sbjct: 128 KDLPMIYNQWANVVRWEK--TTNPFLRSREFLWQEGHTCHSNPLEARKFTKGMISTYSKF 185

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            K+F     ++   T  EK  G                                    A 
Sbjct: 186 LKNFLAIPTIIGKKTPKEKFAG------------------------------------AC 209

Query: 475 YGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
                E ++KD  GR  Q GT      N   +F   +   ++E  +    ++  +G   R
Sbjct: 210 STYTVEAMMKD--GRALQAGTSHYLAQNFSKQFEIQFKTENNELDYA---YQTSWGVSTR 264

Query: 534 FIGIMIENFKGN----LPLWLSPIQAIVT----TITSSAVEYAQEIANLLKSHHLSIETD 585
            +G +I     N    +P  ++PIQ  V             Y   +   L S    +  D
Sbjct: 265 LLGAIIMTHGDNRGIIIPPRVAPIQIDVLELFANKNKEVHTYCDNLYKDL-SRKFRVRLD 323

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV---SLLDAIPILT 642
             ++   +K     I+ +P+ I  G K+   +S+ I R  +     +    + D +  L 
Sbjct: 324 SSDKGPGFKASNSEIQGVPLRIEVGPKDIENKSVTIVRRDTLEKINIKQSEVKDQVETLL 383

Query: 643 KE 644
            +
Sbjct: 384 NQ 385


>gi|302036852|ref|YP_003797174.1| prolyl-tRNA synthetase [Candidatus Nitrospira defluvii]
 gi|190343267|gb|ACE75655.1| prolyl-tRNA synthetase [Candidatus Nitrospira defluvii]
 gi|300604916|emb|CBK41249.1| Prolyl-tRNA synthetase [Candidatus Nitrospira defluvii]
          Length = 543

 Score =  151 bits (381), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 45/219 (20%), Positives = 87/219 (39%), Gaps = 9/219 (4%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  +G+  +   G ++ + +   +R ++     +E+  P      LW+++G WD Y  
Sbjct: 7   IRKVAAGIYTYLPLGLRVLRKIERIVREEMNRAGAQELLMPVASPAELWRETGRWDFYGK 66

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            +   K      +  R F L P +      +F   ++SYR++P+   +  + +R+E    
Sbjct: 67  ELLRFKD-----RHERDFCLGPTHEEVITDLFRREVRSYRQMPLNFYQIQTKFRDEIRPR 121

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFN-ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
             GLMR R F   DA+ F   E        K+++    I+   G     V+  T      
Sbjct: 122 F-GLMRGREFIMKDAYSFDRDEAGARLNYQKMYDAYNRIFTRCGLTFRPVEADTGLIGGT 180

Query: 436 GSDALWDDAENIMKGVLDTIKNSSQDRIN-TGVLLGEGA 473
            S      AE   + ++ +   +    +    VL  + A
Sbjct: 181 SSHEFMVLAETGEETIVYSEDGTYAANVERAEVLPPDTA 219



 Score = 81.0 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 67/173 (38%), Gaps = 9/173 (5%)

Query: 476 GPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
            P+ +  LK A G +   G +  +         A ++++  ++   VM      G     
Sbjct: 367 SPRKDGTLKTAKGIE--VGHVFMLGTKYSQAMKATFLDAQGQEQLAVM-GCYGIGVSRTA 423

Query: 535 IGIMIENFKGNLPLWL---SPIQAIVTTITSSA--VEYAQEIANLLKSHHLSIETDFRNE 589
              + +N       W    +P    +  ++ S    + A+ +   ++   + +  D R+E
Sbjct: 424 AASVEQNHDAKGIKWPVPIAPFHVTLLPLSQSQPVTQLAETLYRAMQEAGIEVLWDDRDE 483

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
               K  +  +   P  ++ G+K  ++  + ++   +  TQKV+    + +L+
Sbjct: 484 RAGVKFNDADLIGAPYHLVIGEKGLAQGQVELKLRHTGETQKVAPDQVVALLS 536


>gi|290559900|gb|EFD93222.1| prolyl-tRNA synthetase [Candidatus Parvarchaeum acidophilus
           ARMAN-5]
          Length = 477

 Score =  151 bits (381), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 74/426 (17%), Positives = 152/426 (35%), Gaps = 56/426 (13%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
                     E     + ++  + ++   +    G   +   G++I++  + Y+  K K 
Sbjct: 1   MAEGIDVKKGEDLISWYNQVVIKSEMVDFSAIK-GFAVYRPYGYEIWERSVQYLDSKFKS 59

Query: 290 -DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
                   P ++ + +  ++  H   +   +  V    DT  D R  AL+P +       
Sbjct: 60  VGVRNAYFPLLIPESILSKEKEHIKGFNPEVAWVTMGGDTKLDER-LALRPTSETIMYDS 118

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH-VFCTKEQMFNECLK 406
           ++  +KSYR+LP+ + ++ ++ R E       L+R R     + H VF T+E+  N   +
Sbjct: 119 YSKWIKSYRDLPLLINQWNTMVRWETK-ETRLLLRGREVLWQEGHCVFRTEEEADNNARE 177

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           I        ++     ++    +  EK  G                              
Sbjct: 178 ILQFYKQYMEEMLAIPVIAGRKSESEKFAG------------------------------ 207

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
                 A      E +L +            +  N    F+  +++ ++   +P    + 
Sbjct: 208 ------AVDTYTIEAVLSNNFMSQAATSHN-LGRNFSKPFDIKFLDENNNLQYPF---QT 257

Query: 527 VFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSH 578
            +G   R IGIM+    ++    LP  ++P Q  +  I        +EYA ++   L   
Sbjct: 258 SWGISMRSIGIMVLIHGDDKGLVLPPHIAPYQCAIIPILKDEKDKVLEYADKVNLKLNEL 317

Query: 579 HLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
            +      R++ +  +K+ +  +K IPI I  G KE    SI ++   S     ++  D 
Sbjct: 318 GIRTILFNRDDVSPGWKLNDSDMKGIPIKIQIGKKELESDSIFVKTRISNEASSIAFSD- 376

Query: 638 IPILTK 643
           I  +  
Sbjct: 377 ISKIKD 382


>gi|28212194|ref|NP_783138.1| prolyl-tRNA synthetase [Clostridium tetani E88]
 gi|81841121|sp|Q890M2|SYP_CLOTE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|28204638|gb|AAO37075.1| prolyl-tRNA synthetase [Clostridium tetani E88]
          Length = 570

 Score =  151 bits (380), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 52/249 (20%), Positives = 98/249 (39%), Gaps = 11/249 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +   ++       E+E   H+ + R   +  +A   SGV  +   G ++ + +   +R +
Sbjct: 4   SNMLVSTLREVPAEAEIPSHKLMLRAGMMRKMA---SGVYNFMPFGLRVIKKIEDIVREE 60

Query: 287 I-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E     +L   LW++SG WD +   MF ++  ++     R F L P +     
Sbjct: 61  MDNAGAQEFLASALLPSELWKESGRWDVFGPEMFRLQDRNN-----REFCLGPTHEEVFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +  + + SY++LP+ L +  + YR+E      GLMR R F   DA+ F    E +    
Sbjct: 116 DIARNEINSYKQLPLNLYQIQTKYRDERRPRF-GLMRSREFIMKDAYSFDKDYEDLDVSY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            K++    +I+   G E   V+  +      GS      +E     +           I 
Sbjct: 175 KKMYEAYHNIFIRCGLECNCVEADSGAMGGAGSAEFMVKSEVGEDEIAFCDSCGYGANIE 234

Query: 465 TGVLLGEGA 473
               + E  
Sbjct: 235 KAPAISEKF 243



 Score = 88.3 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 61/163 (37%), Gaps = 9/163 (5%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I  +         A +++   E   P+++     G        + +N   N  
Sbjct: 402 RGIEVGHIFKLGTKYSESMGANFLDEKGE-SRPLVMGCYGIGVSRTMAAAIEQNHDENGI 460

Query: 548 LWL---SPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W    +P   IV  +       ++ A+EI N LKS  + +  D R E    K ++  + 
Sbjct: 461 VWPLSIAPYHVIVVPVITKDEEQMKAAEEIYNKLKSMGVEVLLDDRAERPGVKFKDADLI 520

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            IPI +  G K   E  +  +       + +++      + +E
Sbjct: 521 GIPIRVTVGKK-IKEGKVEYKLRKEEDLEILNIEQVYDKVREE 562


>gi|256828741|ref|YP_003157469.1| prolyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
 gi|256577917|gb|ACU89053.1| prolyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
          Length = 580

 Score =  151 bits (380), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 48/221 (21%), Positives = 90/221 (40%), Gaps = 11/221 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  +        E+E   H+ L R   +  +    SG+  +   G +    + + +R 
Sbjct: 3   FSKFYVPTLKETPAEAEVISHKLLLRAGMIRKL---TSGIYTYMPLGLRAINKVANIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +EI+ P V    LWQ+SG WD Y   +  +K      +  R + L P +    
Sbjct: 60  EMNRAGAQEISMPMVQPADLWQESGRWDFYGKELLRLKD-----RHGRDYCLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    ++SYR+LP+ L +  + +R+E      GLMR R F   DA+ F   ++  N  
Sbjct: 115 TDLIRGEVRSYRQLPINLYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSFDKDDEGVNAS 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
            + +++    ++   G E   V   +       S      A
Sbjct: 174 YQAMYDAYTRVFTRLGLEFRAVSADSGAIGGSFSHEFMVLA 214



 Score = 79.1 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 22/146 (15%), Positives = 57/146 (39%), Gaps = 9/146 (6%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF----KGNLPLWLSPI 553
           +        NA +++ + ++   +++     G   R +   IE          P  ++P 
Sbjct: 418 LGTKYSKSMNATFLDENGKEQV-IIMGCYGIGVS-RVVAACIEQNNDANGMIFPPSIAPF 475

Query: 554 QAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           +  +  ++      +   +EI + L+S  +    D R+E    K  E  +   P+ I+ G
Sbjct: 476 EITILAMSTKDEKVMAKGREIHDWLESQGIDTLFDDRDERPGVKFNEADLLGSPMQIVIG 535

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLD 636
            K   +  + ++   +   +++ + D
Sbjct: 536 GKGLEKGVLEVKNRKTGEKRELPVAD 561


>gi|148264838|ref|YP_001231544.1| prolyl-tRNA synthetase [Geobacter uraniireducens Rf4]
 gi|146398338|gb|ABQ26971.1| prolyl-tRNA synthetase [Geobacter uraniireducens Rf4]
          Length = 585

 Score =  151 bits (380), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 53/249 (21%), Positives = 94/249 (37%), Gaps = 11/249 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  +        ++E   H+ + R   +  +A    GV  +   G +  + + + +R +
Sbjct: 18  SQYFIPTVKETPSDAEVISHQLMLRAGMIRKLAA---GVYNYLPLGLRSIRKVENIVREE 74

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P V    LWQ+SG W+ Y   +   K   DT      F + P +     
Sbjct: 75  MNRAGAIELLMPTVQPAELWQESGRWEQYGKELLRFKDRKDT-----EFCMGPTHEEVIT 129

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    +KSYR+LP+ L +    +R+E      GLMR R F   DA+ F   E+  +   
Sbjct: 130 DLVRREVKSYRQLPINLYQIQGKFRDEIRPRF-GLMRGREFIMKDAYSFDVNEKAADISY 188

Query: 406 -KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            K++     I++  G     V+  T       S      AE+    ++          + 
Sbjct: 189 DKMYQAYRRIFERCGLRFRAVEADTGSIGGSYSHEFMVLAESGEDAIVSCTACDYAANVE 248

Query: 465 TGVLLGEGA 473
                  GA
Sbjct: 249 KAEARQSGA 257



 Score = 90.2 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 67/163 (41%), Gaps = 12/163 (7%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGN 545
           R  + G +  +         A Y+++  ++    +I    +G  I R +   IE N   N
Sbjct: 417 RGIEVGHVFKLGTKYSKAMKATYLDADGKEQ---IIFMGCYGIGIGRTVAACIEQNHDDN 473

Query: 546 LPLWLSPIQAIVTTIT------SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
             ++  PI      I+          + ++ I   L +  + +  D R+E   +K ++  
Sbjct: 474 GIIFPLPIAPFHCIISALNMKEEPVRDSSEAIYAQLAAAGVEVLLDDRDERPGFKFKDAD 533

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +  IP+ I+ G K  ++  + ++   +   + +S+ DA+  + 
Sbjct: 534 LIGIPLRIVVGSKNLADGKVELKNRKTGDVELLSIADAVEKVK 576


>gi|315635289|ref|ZP_07890566.1| proline--tRNA ligase [Aggregatibacter segnis ATCC 33393]
 gi|315476035|gb|EFU66790.1| proline--tRNA ligase [Aggregatibacter segnis ATCC 33393]
          Length = 571

 Score =  151 bits (380), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 53/249 (21%), Positives = 99/249 (39%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  L+       E+    H+ + R   +  +A   SG+  W   GW++ Q + + +R 
Sbjct: 3   TSKYLLSTLKETPAEAAIVSHQLMLRAGMIRPLA---SGLYNWMPTGWRVLQKVENIIRE 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      EI  P V    LWQ+SG WD Y   +       +     R+F + P N    
Sbjct: 60  EMNKSGAIEIKMPVVQPAELWQESGRWDQYGPELLRFTDRGE-----RSFVIGPTNEEAI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SYR+LP+ L    + +R+E      G+MR R F   DA+ F   ++   + 
Sbjct: 115 TDLMRREVTSYRQLPLNLYHIQTKFRDEVRPRF-GVMRSREFIMKDAYSFHMDKESLQQT 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            + ++    +I+   G +   V+  T       S      A +    V+ + ++     I
Sbjct: 174 YEVMYQTYSNIFTRLGLDFRAVQADTGSIGGSASHEFQVLANSGEDDVIFSTESDYAANI 233

Query: 464 NTGVLLGEG 472
                +  G
Sbjct: 234 ELAEAVAVG 242



 Score = 89.8 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 62/169 (36%), Gaps = 14/169 (8%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           I R  + G I Q+     +  NA           P ++    +G  + R +   IE +  
Sbjct: 403 IKRGIEVGHIFQLGDKYSNAMNATVQGEDG---RPTVVTMGCYGIGVTRVVAAAIEQHHD 459

Query: 544 GNLPLW----LSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
               +W    ++P    +  +    + S   +A+E+   L +  + +  D R E      
Sbjct: 460 ERGIIWPSDAMAPFTVAIVPMNMHKSESVQAFAEELYRTLLAQGVEVIFDDRKERPGVMF 519

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            +  +  +P +++ G+K  +   I  +   S   Q ++    I  L  +
Sbjct: 520 ADMELIGVPHMVVIGEKNLANGEIEYKNRRSGEKQMIAKAQLIDFLKSQ 568


>gi|296101364|ref|YP_003611510.1| prolyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
 gi|295055823|gb|ADF60561.1| prolyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
          Length = 572

 Score =  151 bits (380), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 56/264 (21%), Positives = 103/264 (39%), Gaps = 12/264 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGVRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E++ P V    LWQ+SG W+ Y   +       +     R F L P +    
Sbjct: 60  EMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGE-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+   +  + +R+E      G+MR R F   DA+ F T  +   E 
Sbjct: 115 TDLIRNELSSYKQLPLNFFQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHTSHESLQET 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             K++     I+   G +   V+  T       S      A++    V+ +  +     I
Sbjct: 174 YDKMYEAYSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVIFSDSSDYAANI 233

Query: 464 NTGVLLGEGAFYGPKF-EYILKDA 486
                L      G    E  L D 
Sbjct: 234 EFAEALAPKEPRGAATQEMTLVDT 257



 Score = 85.2 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 33/176 (18%), Positives = 59/176 (33%), Gaps = 11/176 (6%)

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFI 535
           P  +      I R  + G I    +  SR  A       E     ++    +G  + R +
Sbjct: 395 PSPDGQGTLMIKRGIEVGHIFQLGDKYSR--ALNAAVQGEDGRNQILTMGCYGIGVTRVV 452

Query: 536 GIMIENFKGN----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDFR 587
              IE          P  ++P Q  +  +         E A+++   L++  + +  D R
Sbjct: 453 AAAIEQNYDERGIVWPDNIAPFQVAILPMNMHKSYRVQELAEKLYAELRAQGIEVLMDDR 512

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            E       +  +  IP  I+ GD+      I  +   S   Q +   D +  L K
Sbjct: 513 KERPGVMFADMELIGIPHTIVIGDRNLDSDEIEYKYRRSGEKQMIKTGDILDYLVK 568


>gi|94498868|ref|ZP_01305406.1| prolyl-tRNA synthetase [Oceanobacter sp. RED65]
 gi|94428500|gb|EAT13472.1| prolyl-tRNA synthetase [Oceanobacter sp. RED65]
          Length = 584

 Score =  151 bits (380), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 46/249 (18%), Positives = 93/249 (37%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  +        ++    H+ + R   +  +A   SG+  W   G K  + +   +R 
Sbjct: 3   ASQYLVATLKESPSDAVVVSHQLMLRAGMIRKLA---SGLYTWLPLGLKTLRKVEKVVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +E+  P V    LW++SG W  Y   +  +K      +  R F + P +    
Sbjct: 60  EMDAAGAQEVLMPAVQPAELWEESGRWFEYGGELLRLKD-----RHNRDFCVGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
             +  + L SY++LP    +  + +R+E      G+MR R F   DA+ F    + +   
Sbjct: 115 TDLARNELNSYKQLPSNFYQIQTKFRDETRPRF-GVMRSREFIMKDAYSFHIDGDSLQQT 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             ++H    +I+   G +   V   T       S      A++    +  +  +S    +
Sbjct: 174 YDRMHQAYTNIFTRLGLDFRPVAADTGSIGGAVSHEFHVLAQSGEDDIAFSNASSYAANV 233

Query: 464 NTGVLLGEG 472
                +   
Sbjct: 234 ELAEAVAPK 242



 Score = 72.1 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 25/157 (15%), Positives = 56/157 (35%), Gaps = 13/157 (8%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           I R  + G I Q+         A  ++ + ++   +M+     G   R +   IE    +
Sbjct: 412 IKRGIEVGHIFQLGTKYSEALGAKVLDENGKEKT-MMMGCYGIGVS-RVVAAAIEQNHDD 469

Query: 546 ----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNET--INYKI 595
                P  ++P Q  +  I    +   V+Y++E+   L +  + +  D R++      K 
Sbjct: 470 RGIIWPEAIAPFQVSIVQIDAQKSEDVVKYSEELYESLTALGVDVFLDDRDKKTSPGVKF 529

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
            +  +  IP  ++   +         +    +    V
Sbjct: 530 ADSELMGIPHRVVLSSRGLKAGKAEYKHRKDSKDGIV 566


>gi|224130834|ref|XP_002320936.1| predicted protein [Populus trichocarpa]
 gi|222861709|gb|EEE99251.1| predicted protein [Populus trichocarpa]
          Length = 508

 Score =  151 bits (380), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 77/414 (18%), Positives = 143/414 (34%), Gaps = 68/414 (16%)

Query: 255 LFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTP----QVLDQHLWQQSGH 310
           L     D SG          I++ +  +   +IK    +I        V    L ++  H
Sbjct: 36  LMIEYYDISGCYILRPWAMSIWEIMQVFFDAEIKK--MKIKNCYFPLFVSSSVLEKEKDH 93

Query: 311 WDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYR 370
            + +   +  V  +  +  ++   A++P +       F+  ++ +R+LP++L ++ +V R
Sbjct: 94  IEGFAPEVAWVTKSGKSDLEI-PIAIRPTSETVMYPYFSKWIRGHRDLPLKLNQWCNVVR 152

Query: 371 NEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
            E S      +R R F   + H  F TK++   E L+I  L   IY++F    I+    +
Sbjct: 153 WEFSNPT-PFIRYREFLWQEGHTAFATKQEADEEVLQILELYRRIYEEFLAIPIIKGKKS 211

Query: 430 RPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGR 489
             EK  G                                      Y    E  + +  GR
Sbjct: 212 EMEKFAGG------------------------------------LYTTSVEAFIPNT-GR 234

Query: 490 DWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW 549
             Q  T        ++   F +N  +EK    M  +  +    R IG+M+     +  L 
Sbjct: 235 GIQGATSHCLGQNFAK--MFEINFENEKGEKGMAWQNSWAYSTRTIGVMVMVHGDDKGLV 292

Query: 550 LSP----IQAIVTTI------TSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIREH 598
           L P    +Q IV  +      T    +      + L    +  E D+R N +  +K    
Sbjct: 293 LPPKVSSVQVIVVPVPFKDANTQGIFDACAATVDTLCEAGIRAEADYRENYSPGWKYSHW 352

Query: 599 SIKKIPIIIICGDKEASERSIG-------IR--RFGSTTTQKVSLLDAIPILTK 643
            +K +P+ I  G K+ +            +R  R  +     +S  +    +  
Sbjct: 353 EMKGVPLRIEIGPKDLANNQASIPSLHFTVRAVRRDNAAKVDISCDNLAEKVKD 406


>gi|182420015|ref|ZP_02951249.1| prolyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237666786|ref|ZP_04526771.1| proline--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262]
 gi|182376052|gb|EDT73639.1| prolyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237657985|gb|EEP55540.1| proline--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262]
          Length = 570

 Score =  151 bits (380), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 54/243 (22%), Positives = 100/243 (41%), Gaps = 11/243 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +   ++       E+E   H+ + R   +  +A    G+  +   G K+ + +   +R +
Sbjct: 4   SNMLISTLREVPAEAEIDSHKLMLRAGMIRKMAA---GIYNYMPLGLKVLKNVEDIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E     ++   LWQ+SG WD+Y A MF VK         R F L P +     
Sbjct: 61  MNAAGAQEFLASAMIPAELWQESGRWDAYGAEMFRVKDRG-----ARDFCLGPTHEEVFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +  + +KSY++LP+ L +  + YR+E      G+MR R F   DA+ F    + +    
Sbjct: 116 DIARNEIKSYKQLPLNLYQIQTKYRDERRPRF-GVMRSREFIMKDAYSFDKDQDGLDIVF 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            K+H+  + I+   G +   V+  +       S      +E     V+   + +    I 
Sbjct: 175 NKMHDAYVKIFNRCGLDAKCVEADSGAIGGSNSAEFMVKSEVGEDDVVFCSECNYAANIE 234

Query: 465 TGV 467
             V
Sbjct: 235 KAV 237



 Score = 82.9 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 61/163 (37%), Gaps = 10/163 (6%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I  +        NA +++    K  P ++     G       I+ ++   N  
Sbjct: 402 RGTEVGHIFKLGTKYSDAMNANFIDEDG-KEKPFVMGCYGIGVTRTMASIIEQHHDENGI 460

Query: 548 LWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W    +P    V  +       V+ A E+ + L S  + +  D RNE    K ++  + 
Sbjct: 461 IWPLSVAPYHISVIPVNVKDEEQVKIATELYDQLFSMGVEVLLDDRNERAGVKFKDSELM 520

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            IP+ +  G K  ++  +  +       + + + D   I+  E
Sbjct: 521 GIPMRVTVGKK-ITDGEVEFKLRDG-DMEVIKISDVCNIVKGE 561


>gi|75908528|ref|YP_322824.1| prolyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
 gi|114152169|sp|Q3MAQ7|SYP_ANAVT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|75702253|gb|ABA21929.1| Prolyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
          Length = 604

 Score =  151 bits (380), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 55/249 (22%), Positives = 97/249 (38%), Gaps = 8/249 (3%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q           ++E   H+ L R   +  I   GSG+  +    W++ Q +   +R +
Sbjct: 4   SQMLFVTLRDDPADAEIPSHKLLLRAGYIRRI---GSGIYAYLPLMWRVLQKVSQIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E   PQ+    LW++SG WD+Y      +    D  +  +   L P +     
Sbjct: 61  MNAAGAQECLLPQLQPSELWKESGRWDTYTKAEGIMFSLID--RREQQLGLGPTHEEVIT 118

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           A+    ++SYR+LP+ L +  + +R+E      GLMR R F   D + F   E    +  
Sbjct: 119 AIARDMIRSYRQLPLHLYQLQTKFRDEIRPRF-GLMRGREFIMKDGYSFHVDEDSLKKTY 177

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
           + ++    ++ +  G     V+  +      GS      AE     VL T        + 
Sbjct: 178 QDMYQAYSNMLRRAGLAFRPVEADSGAIGGSGSTEFMVLAEAGEDEVLYTDDGKYAANVE 237

Query: 465 TGVLLGEGA 473
             V L   A
Sbjct: 238 KAVSLPADA 246



 Score = 85.6 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 63/162 (38%), Gaps = 9/162 (5%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I Q+         A Y N   E+  P+++     G        + +++  +  
Sbjct: 435 RGIEVGHIFQLGTKYSQALGATYTNEQGEEK-PLVMGCYGVGVSRLAQSAVEQSYDKDGI 493

Query: 548 LWL---SPIQAIV-TTITSS--AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W    +P  AIV     +    VE A+ +   L    +    D RNE    K ++  + 
Sbjct: 494 IWPVAIAPYHAIVTIPNINDAQQVEIAERLYTELNQSGVETLLDDRNERAGVKFKDADLI 553

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            IP  I+ G +  +   + I    +  +Q++ + + I  L +
Sbjct: 554 GIPYRIVTG-RAITNGKVEIVERATRQSQEIPIDEVITTLQQ 594


>gi|261344716|ref|ZP_05972360.1| hypothetical protein PROVRUST_05973 [Providencia rustigianii DSM
           4541]
 gi|282567158|gb|EFB72693.1| proline--tRNA ligase [Providencia rustigianii DSM 4541]
          Length = 576

 Score =  151 bits (380), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 62/332 (18%), Positives = 122/332 (36%), Gaps = 17/332 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSKYLLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYDWLPTGVRVLRKVENIVRE 59

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E++ P V    LWQ+SG W+ Y   +       +     R F L P +    
Sbjct: 60  EMENAGAIEVSLPVVQPADLWQESGRWEQYGPELLRFVDRGE-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + + SY++LP+ L +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLVRNEITSYKQLPLNLFQIQTKFRDEVRPRF-GVMRSREFIMKDAYSFHTSQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   GF+   V   T       S      A++    V+ + ++     I
Sbjct: 174 YDAMYEAYSKIFTRIGFDFRAVLADTGSIGGNASHEFQVLAQSGEDDVVFSTESDFAANI 233

Query: 464 NTGVLLGEGAFY-GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
                +        P  E  L D          ++       +     +    +     +
Sbjct: 234 EFAEAVAPNVQRAAPSEEMHLVDTPNAKTIAELVEQFNLPIEKTVKTLIVHAKKDSGHTL 293

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQ 554
           +   + G  E     + E      PL  SP+Q
Sbjct: 294 VALLIRGDHE-----LNEIKAEKHPLVASPLQ 320



 Score = 92.5 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 59/174 (33%), Gaps = 10/174 (5%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           I R  + G I Q+         A   N        V +     G        + ++    
Sbjct: 405 IKRGIEVGHIFQLGTKYSEAMKASVQNEEGHNQI-VTMGCYGIGVTRIVAAAIEQSHDDR 463

Query: 546 LPLW---LSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
             +W   ++P Q  +  +         E A+++   LK+  + +  D R E       + 
Sbjct: 464 GIIWSDAIAPFQVAILPMNMHKSYRVKEVAEKLYADLKAQGIDVIFDDRKERPGVMFADM 523

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
            +  +P  I+ GD+      +  +   S     V L + +  L KE L  + +K
Sbjct: 524 ELIGVPYTIVIGDRNLDTNQVEYKSRRSDDKALVGLDNVVSFL-KEKLATNLRK 576


>gi|326481769|gb|EGE05779.1| prolyl-tRNA synthetase [Trichophyton equinum CBS 127.97]
          Length = 604

 Score =  151 bits (380), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 86/419 (20%), Positives = 160/419 (38%), Gaps = 68/419 (16%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHL-WQQSGHWDSYRAN 317
            D SG        + I++ + S+   KIK  + +  + P  + + +  ++  H + + A 
Sbjct: 117 YDVSGCFVLKPHSFFIWEQIQSWFDAKIKQMNVKNCSFPLFVSEDVLKKEKDHIEGFAAE 176

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           +  V  A ++  + +  A++P +       +   ++S+R+LP++L ++ SV R E     
Sbjct: 177 VAWVTHAGNSALEKK-IAIRPTSETVMYPYYAKWIRSHRDLPLKLNQWNSVVRWEFKNP- 234

Query: 378 HGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
              +R R F   + H    T+E+   E L+I      +Y++     ++    T  EK  G
Sbjct: 235 QPFLRTREFLWQEGHTAHLTREEAHTEVLQILQHYAHVYEELLAVPVIQGQKTDKEKFAG 294

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
                                                 Y    E  +  A GR  Q GT 
Sbjct: 295 G------------------------------------LYTTTVEGYIP-ATGRGIQGGTS 317

Query: 497 Q-VDFNLPSRFNAFYVNSH---SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
             +  N    F     +      EK  P+ + +  +G   R IG+M+     N  L L P
Sbjct: 318 HGLGQNFSKMFGITVEDPSARPDEKKPPLHVWQNSWGLSTRTIGVMVMIHGDNRGLVLPP 377

Query: 553 ----IQAIVTTITSSA----VEYA------QEIANLLKSHHLSIETDFRNE-TINYKIRE 597
               IQ ++  +   A     E A      + IA +L +  + +E D R+  T  +K  +
Sbjct: 378 RVADIQTVIVPVGLGAKTPDEERAAIMAEIEAIATVLSAAGVRVEVDKRDGYTPGWKFND 437

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRF---GSTTTQKVSLLD---AIPILTKESLPPDC 650
             +K IP+ +  G  E++   +   R    G      +++ D   A+P L  E++  D 
Sbjct: 438 WELKGIPLRLEFGPGESAGSFVTTSRRDIAGKEGKSSIAIKDLGTAVPTLL-ETIQADL 495


>gi|146329716|ref|YP_001210021.1| prolyl-tRNA synthetase [Dichelobacter nodosus VCS1703A]
 gi|166980118|sp|A5EXK9|SYP_DICNV RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|146233186|gb|ABQ14164.1| prolyl-tRNA synthetase [Dichelobacter nodosus VCS1703A]
          Length = 572

 Score =  151 bits (380), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 46/232 (19%), Positives = 82/232 (35%), Gaps = 11/232 (4%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E   H+ + R   +   A    G+  W   G ++   + + +R ++      E+  P 
Sbjct: 17  EAEVISHQLMLRAGMIRQTAV---GIYSWLPLGLRVLNKVSAIIREEMDRAGALEVVMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
                LWQ+SG W +Y   +          +  R + + P +      +    L SY++L
Sbjct: 74  AQPAELWQESGRWHAYGPELQRFID-----RHQRDYCIGPTHEEVVTDLVRRDLSSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKD 417
           PV L +  + +R+E      G+MR R F   D + F            K+++    I+  
Sbjct: 129 PVNLYQIQTKFRDEIRPRF-GVMRGREFVMKDGYSFDLDVAGMKNSYQKMYDAYCRIFDR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL 469
            G     V          GS      AE     +  +  +     I     L
Sbjct: 188 LGLNYRPVIADNGAIGGTGSHEFHVLAETGEDSIAFSNASDYAANIEKAEAL 239



 Score = 87.1 bits (214), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 34/178 (19%), Positives = 60/178 (33%), Gaps = 11/178 (6%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           P  +      I R  + G + Q+        N          C P+M    +   + R I
Sbjct: 395 PSPDGQGTLLIRRGIEVGHVFQLGEKYSKAMNLTVPLEDGTLCTPLMGCYGI--GVTRVI 452

Query: 536 GIMIE-NFKGNLPLW---LSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFR 587
              IE N   N  +W   L+P    +  I    + +  + A+ +        + +  D R
Sbjct: 453 AAAIEQNHDENGIIWSKELAPFSVAILPINADKSEAVRDAAEALYQKFLQAGVDVVLDDR 512

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           N        +  +  IP  I+  DK  +  S+  +R     T  +SL + +     E 
Sbjct: 513 NRRAGVMFADIDLIGIPARIVISDKTLATGSVEFKRRNEQETFHISLEEIVAQFCAEE 570


>gi|145505431|ref|XP_001438682.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124405854|emb|CAK71285.1| unnamed protein product [Paramecium tetraurelia]
          Length = 698

 Score =  151 bits (380), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 68/412 (16%), Positives = 145/412 (35%), Gaps = 62/412 (15%)

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-----RKIKDDYEEINTP 297
              ++++ R+ +L     D SG        + I++ +  Y        ++++ Y  +   
Sbjct: 213 SEWYQQVIRKAELIEY-YDVSGCYILRPWAYFIWEQIQRYFDDLIRTEEVENTYFPMFLS 271

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
               +HL ++  H + ++A +  V    ++       A++P +       F   ++S+R+
Sbjct: 272 A---KHLNKEKEHVEGFKAEVAWVTKYGESDL-NEPLAIRPTSETIMYPAFAKWVQSHRD 327

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYK 416
           LP+++ ++ ++ R E        +R R F   + H    T+E+   +   I +    +Y 
Sbjct: 328 LPLKVNQWTNIVRWEFKFPT-PFIRTREFLWQEGHTAHATREEAVKQVYTILDFYEQVYG 386

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           +     ++  + T  EK  G D                                    + 
Sbjct: 387 ELLAVPVIKGIKTESEKFAGGD------------------------------------FT 410

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
              E I+    GR  Q  T        S+   F +N   +K       +  +G   R IG
Sbjct: 411 TTVETIIP-QNGRGLQGATSHHLGQNFSK--MFEINFEDDKKQKAFAWQTSWGLTTRSIG 467

Query: 537 IMIENFKGNLPLWLSPI----QAIVTTITSSAV------EYAQEIANLLKSHHLSIETDF 586
            MI     +  L L P     Q ++  I    +      E  ++I  +L    L +  D 
Sbjct: 468 AMIMFHGDDKGLVLPPRIAKYQIVIIPIIHKDLDENQLNERCEQIRQILVKQKLRVHLDS 527

Query: 587 RNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
           R+  +  +K  +   K +P+ +  G  E     + + +       ++ L + 
Sbjct: 528 RDNYSPGWKFNKWEQKGVPVRLEIGPGEFKNNEVRVVQRFDNKKYQIKLEEL 579


>gi|325123334|gb|ADY82857.1| prolyl-tRNA synthetase [Acinetobacter calcoaceticus PHEA-2]
          Length = 571

 Score =  151 bits (380), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 74/428 (17%), Positives = 150/428 (35%), Gaps = 49/428 (11%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++           ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   ASRFLFATLRETPNDAEVISHQLMLRAGMIRKLA---SGLYTWLPMGTRVLKKVDAIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P      LW++SG ++ Y   +   K      +    F L P +    
Sbjct: 60  EMNRSGAMEVFMPVTQPASLWEESGRYEQYGPELLRFKD-----RHTNPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + LKSY++LPV   +  + +R+E      G+MR R F   DA+ F   ++   E 
Sbjct: 115 TDMARNELKSYKQLPVNFYQIQTKFRDEIRPRF-GVMRSREFIMKDAYSFHATQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +++    I+   G +   V+  T       S      A +    +  + ++     +
Sbjct: 174 YDVMYDTYSRIFTRLGLDFRPVQADTGSIGGSASHEFHVLAASGEDDIAFSTESDYAANV 233

Query: 464 N--TGVLLGEGAFYGPKFEYILKDAIGR---DWQCGTIQVDFNLPSRFNAFYVNSHSEKC 518
                VL+GE A   P  E+ L +   +   D  C  +  D     +       +  +  
Sbjct: 234 EMAEAVLVGERA--APTQEFKLVETPNQKTIDDVCQFLNADPKQSVKALLVQGIADEKGN 291

Query: 519 HPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP------IQAIVTTITSSAVEYAQEIA 572
            PV +   V G  E     + E      PL  +P       Q     +T+          
Sbjct: 292 VPV-VALFVRGDHE-----LNEIKAEKHPLVAAPLTFATEEQLQAFGLTAGFTGP----- 340

Query: 573 NLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR-RFGSTTTQK 631
             L    L++  D     ++               + G  EA + ++G+     +  ++ 
Sbjct: 341 QGLVEKGLTVIVDRAASVLSD-------------FVAGANEADKHAVGVNWERDAQISEV 387

Query: 632 VSLLDAIP 639
             L + + 
Sbjct: 388 FDLRNVVE 395



 Score = 89.1 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 59/167 (35%), Gaps = 13/167 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           I R  + G I Q+            +    +   P  +    +G  + R +   IE N+ 
Sbjct: 408 IKRGIEVGHIFQLGTKYSEALGCKVLGEDGK---PFTVTMGCYGIGVTRVVAAAIEQNYD 464

Query: 544 GNLPLWL---SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
               +W    +P +  +  +    +   +E A+ +   L++    +  D RNE    K  
Sbjct: 465 DKGIIWPQAIAPFEIAIVPMNAHKSPRTLEAAESLYAELQAQGFDVLLDDRNERPGVKFS 524

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  +  IP  I+ G+K     +   +         ++  + +  L +
Sbjct: 525 DLELMGIPHRIVIGEKGLDAGTFEYKGRRDAEASNLTKEELLAKLAR 571


>gi|209882409|ref|XP_002142641.1| prolyl-tRNA synthetase family protein [Cryptosporidium muris RN66]
 gi|209558247|gb|EEA08292.1| prolyl-tRNA synthetase family protein [Cryptosporidium muris RN66]
          Length = 687

 Score =  151 bits (380), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 89/468 (19%), Positives = 156/468 (33%), Gaps = 65/468 (13%)

Query: 202 KVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED 261
            V       +           +  + +  L           +   + + R   + +   D
Sbjct: 160 SVNWFNVENNITNKETIPQIVSPQSGENLLGITANKETCFAEWYSQVILRSEMIDY--YD 217

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ-VLDQHLWQQSGHWDSYRANMF 319
            SG        + I++T+ S    KIK+   +    P  V  Q L  +  H + +   + 
Sbjct: 218 VSGCYILRPWSYFIWETIKSKFDNKIKNYGVQNSYFPIFVTKQRLETEKSHVEGFSPEVA 277

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHG 379
            V  + ++       A++P +       +   ++S+R+LP++L ++ S  R E       
Sbjct: 278 WVTRSGESDL-AEPIAIRPTSETIIHPHYAKWIRSHRDLPLKLNQWTSAVRWEFKQPT-P 335

Query: 380 LMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD 438
            +R R F   + H    T E+       I +    IY+D                     
Sbjct: 336 FIRTREFLWQEGHTAHATNEEATEMVRTILDDYADIYQDL-------------------- 375

Query: 439 ALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
                           +       I +      GA      E  + +  GR  Q  T   
Sbjct: 376 ----------------LAVPIIKGIKSESEKFAGANETMTIEGFIPE-NGRAIQAATSH- 417

Query: 499 DFNLPSRF-NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPI 553
             NL   F + F +    EK     +++  +G   R IG+MI     N    LP  ++PI
Sbjct: 418 --NLGQNFSSMFGIEFEDEKGTKQFVYQTSWGLTTRSIGVMIMTHGDNNGIILPPKVAPI 475

Query: 554 QAIVTT------ITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPII 606
           Q ++        IT       +E+  LLK   + +  D R N T  +K     +K + I 
Sbjct: 476 QVVIIPIVFKSSITEEQKIMCEEVEKLLKEEGIRVHIDDRPNYTPGWKYNHWEVKGVCIR 535

Query: 607 IICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE--SLPPDCQK 652
              G K+   +S+ I    +   + +     I  L KE   L  D QK
Sbjct: 536 AEIGPKDIESKSVRIVIRDNRAKKDIP----ISCLQKEIPELLEDLQK 579


>gi|221133881|ref|ZP_03560186.1| prolyl-tRNA synthetase [Glaciecola sp. HTCC2999]
          Length = 570

 Score =  151 bits (380), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 49/248 (19%), Positives = 100/248 (40%), Gaps = 11/248 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  +   G ++   + + +R 
Sbjct: 3   TSQYLLSTQKETPADAEVVSHQLMLRSGMVRKVA---SGLYNYLPTGLRVLNKVANIVRE 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      EI  P V    LW++SG W+ Y   +  +K      +  R F L P +    
Sbjct: 60  EMNKAGAIEIQMPVVQPADLWEESGRWEEYGPELLRIKD-----RHQRDFVLGPTHEEVV 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNE 403
            A+  + + SY++LP+ L +  + +R+E      G+MR R F   DA+ F  +++ +   
Sbjct: 115 TALVRNEVSSYKQLPLNLYQIQTKFRDEVRPRF-GIMRGREFLMKDAYSFHLSQDCLQTT 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             K+     ++++  G E   V          GS      A++    +  +  +     +
Sbjct: 174 YDKMFQAYCNVFERIGLEYRPVIADNGSIGGSGSHEFHVLADSGEDDIAFSNGSDYAANV 233

Query: 464 NTGVLLGE 471
                L  
Sbjct: 234 EMAEALAP 241



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 24/163 (14%), Positives = 55/163 (33%), Gaps = 9/163 (5%)

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN- 545
           I R  + G I    N  S+     V + + K   + +     G   R +   IE      
Sbjct: 406 IKRGIEVGHIFQLGNKYSQAMNCGVLTETGKHETLTMGCYGIGVS-RIMAAAIEQNHDKY 464

Query: 546 ---LPLWLSPIQAIVTTITSSAVEYAQEIANLL----KSHHLSIETDFRNETINYKIREH 598
               P  ++P    +  +        +E+A  L     +  + +  D R E       + 
Sbjct: 465 GIKWPDAIAPFTIAIIPMNMHKSHRIKEVAEKLYEECLALGVEVLFDDRKERPGVMFNDM 524

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            +  +P  I+ G++    + +  +   +   + +++ D    +
Sbjct: 525 ELIGVPHSIVIGERNLDNQEVEYKNRRTGEKKMLNIADLSEFI 567


>gi|148235110|ref|NP_001079554.1| prolyl-tRNA synthetase 2, mitochondrial (putative) [Xenopus laevis]
 gi|28278090|gb|AAH44273.1| MGC53152 protein [Xenopus laevis]
          Length = 466

 Score =  151 bits (380), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 76/414 (18%), Positives = 149/414 (35%), Gaps = 50/414 (12%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I     G   +     +  + LI  + ++++D   ++I+ P +    LW+QSG WD    
Sbjct: 71  IRPSNPGCFHYLPYTVRAMEKLIRLIDKEMQDIGGQKIDMPTLGSAALWRQSGRWDLMGK 130

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL-KSYRELPVRLAEFGSVYRNEPSG 375
            +F +K      +  + + L P +      +       + +ELP+ L +    +R+E   
Sbjct: 131 ELFRLKD-----RHNQEYCLGPTHEELVTHLVASEGGINNKELPLLLYQITRKFRDEQRP 185

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              GL+R R F   D + F   E+   E  + + +   +I++  G   + V+  T     
Sbjct: 186 -CFGLLRGREFYMKDMYTFDISEESAYETYRNVCDAYSNIFRALGVHFVKVQADTGNIGG 244

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKD------AIG 488
             S      A            N  +DR+    L+     +    E +L D        G
Sbjct: 245 KMSHEFHLPA------------NIGEDRL----LVCGSCDFSANVELLLHDEKNCPVCTG 288

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHS---EKCHPVMIHRAVFGS-IERFIGIMIE---- 540
           +  +   I++           +V   +    +  P +     +G  + R +   +E    
Sbjct: 289 QLKETKGIEIGHTFYLGTKYSHVFKANCYDSQKTPFLAEMGCYGIGVSRLLAASLEVLSN 348

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEY-AQEIANLLKSH------HLSIE--TDFRNE-T 590
               + P  ++P Q  + +    + E  A  +A  L          L  E   D R+  T
Sbjct: 349 EDDIHWPGLIAPYQVCLISPKKGSKEIEAISVAETLYDDIIQSVCGLRDETVLDDRSYLT 408

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSI-GIRRFGSTTTQKVSLLDAIPILTK 643
           I  +++E  +   P +I+ G K     S+  +R   +     +S    I  L +
Sbjct: 409 IGKRVKEAHMMGYPYVIVIGKKALETPSLFEVRSHNTDEVHFLSREGVIDFLRR 462


>gi|317052052|ref|YP_004113168.1| prolyl-tRNA synthetase [Desulfurispirillum indicum S5]
 gi|316947136|gb|ADU66612.1| prolyl-tRNA synthetase [Desulfurispirillum indicum S5]
          Length = 572

 Score =  151 bits (380), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 56/285 (19%), Positives = 104/285 (36%), Gaps = 18/285 (6%)

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLF--HIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
              +Q   F  +    D   ++ ++ L   +I +  +G+  +    W++ + + + +R +
Sbjct: 1   MRYSQAFLFTAKETPSDAEVISHQLMLRGGYIKKTAAGIYSYLPLAWRVLRKIENIIREE 60

Query: 287 I-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           + ++  EE+  P  L   LW +SG W  Y   +   +      +  R F + P +     
Sbjct: 61  MTREGAEELMMPAALPAELWMESGRWQKYGPELLRFQD-----RHGRDFCIGPTHEEAIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNEC 404
            +  H + SYR LP  L +  + +R+E      GLMR R F   D + F    E      
Sbjct: 116 DIVRHAVSSYRHLPKNLYQIQTKFRDEIRPRF-GLMRGREFIMKDGYSFDVDDEASATTY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            K++    SI++  G     V+  +       S      A +   G+    K S    + 
Sbjct: 175 EKMYRAYSSIFRRCGLSFKAVEADSGQIGGSFSHEFMVLANSGEDGIASCSKCSYAANL- 233

Query: 465 TGVLLGEGAFYGPKFEYILK-DAIGRDWQCGTIQVDFNLPSRFNA 508
                 E AF G  ++   +    G       +     L   F  
Sbjct: 234 ------EKAFNGNTYQCTPRGSTTGERVSTPGLSSMEQLSEFFGL 272



 Score = 75.2 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 62/168 (36%), Gaps = 11/168 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G + ++         A Y++ +  K  P+++     G        + +N      
Sbjct: 402 RGIEVGHVFRLGTVYSQSMKATYLDRNG-KEQPMVMGCYGIGVGRTAAAAIEQNHDDKGI 460

Query: 548 LWL---SPIQAIVTTITSSAVEYAQEIANLL---KSHHLSIETDFRNETINYKIREHSIK 601
           +W    +P Q ++ T+  S  E ++  A+ L    +    +  D R+E    K  +  + 
Sbjct: 461 IWPMSIAPYQVVICTVNPSRDEQSRATADSLYERLAATCDVLYDDRDERPGVKFIDSELI 520

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL---DAIPILTKESL 646
            IP+ +    K   + S+ I    S       L    + +  L ++ +
Sbjct: 521 GIPLRLTISQKTLEQSSVEITIRKSGEKYLHPLETISEEVARLIQQQM 568


>gi|238810182|dbj|BAH69972.1| hypothetical protein [Mycoplasma fermentans PG18]
          Length = 482

 Score =  151 bits (380), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 67/422 (15%), Positives = 149/422 (35%), Gaps = 61/422 (14%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
           LE+   + +  + ++ +L         ++F     + I++ +   +    ++   + +  
Sbjct: 14  LEQDFAKWYTDVVKQGNLIAYGPVKGTIVF-KPNSYGIWEQIQKNLNECFREKGVQNVYL 72

Query: 297 PQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P ++ + L+ ++  H   +   +  +    D   D + F ++P +      +F + ++SY
Sbjct: 73  PLLIPEKLFNKEKDHIAGFNPELATITKVGDKDLDEKVF-IRPTSEVLFADLFKNSIESY 131

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISI 414
           ++LP+   ++ +V R E   + +  +R R F   + H       +       + +     
Sbjct: 132 KDLPMIYNQWANVVRWEK--TTNPFLRSREFLWQEGHTCHSNPLEARKFTKGMISTYSKF 189

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            K+F     ++   T  EK  G                                    A 
Sbjct: 190 LKNFLAIPTIIGKKTPKEKFAG------------------------------------AC 213

Query: 475 YGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
                E ++KD  GR  Q GT      N   +F   +   ++E  +    ++  +G   R
Sbjct: 214 STYTVEAMMKD--GRALQAGTSHYLAQNFSKQFEIQFKTENNELDYA---YQTSWGVSTR 268

Query: 534 FIGIMIENFKGN----LPLWLSPIQAIVT----TITSSAVEYAQEIANLLKSHHLSIETD 585
            +G +I     N    +P  ++PIQ  V             Y   +   L S    +  D
Sbjct: 269 LLGAIIMTHGDNRGIIIPPRVAPIQIDVLELFANKNKEVHTYCDNLYKDL-SRKFRVRLD 327

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV---SLLDAIPILT 642
             ++   +K     I+ +P+ I  G K+   +S+ I R  +     +    + D +  L 
Sbjct: 328 SSDKGPGFKASNSEIQGVPLRIEVGPKDIENKSVTIVRRDTLEKINIKQSEVKDQVETLL 387

Query: 643 KE 644
            +
Sbjct: 388 NQ 389


>gi|218199143|gb|EEC81570.1| hypothetical protein OsI_25016 [Oryza sativa Indica Group]
          Length = 448

 Score =  151 bits (380), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 63/371 (16%), Positives = 139/371 (37%), Gaps = 59/371 (15%)

Query: 270 RKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHL-WQQSGHWDSYRANMFAVKCADDT 327
             G+ I++ +  Y+  K K+  +  +  PQ +      +++ H + +   +  V      
Sbjct: 5   PYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGK 64

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
             + +   ++P +      +F   ++SYR+LP+ + ++ +V R E        +R   F 
Sbjct: 65  ELEEK-LVVRPTSETIVNHMFTKWIQSYRDLPLMINQWANVTRWEMR--TKPFIRTLEFL 121

Query: 388 QDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
             + H    T E+   E +++ ++      +     ++    +R E   G          
Sbjct: 122 WQEGHTAHATLEEAEKEAMQMIDVYTKFAYEQAAIPVIPGRKSRVETFAG---------- 171

Query: 447 IMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSR 505
                                     A      E ++ D   +  Q GT   +  N    
Sbjct: 172 --------------------------ANRTYTIEAMMGDR--KALQAGTSHNLGQNFSRA 203

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTI- 560
           F   +++ +S+  H   + +  +    RF+G +I     +    LP  ++PIQ ++  I 
Sbjct: 204 FGTQFMDENSQIEH---VWQTSWAISTRFVGGIIMTHGDDAGLMLPPNIAPIQVVIVPIW 260

Query: 561 -----TSSAVEYAQEIANLLKSHHLSIETDFRN-ETINYKIREHSIKKIPIIIICGDKEA 614
                 S+ +E    + N LK   + ++ D     T  +K   + +K +PI +  G ++ 
Sbjct: 261 KKGDEKSAVMEAVSSVQNTLKEAGIRVKVDDSELRTPGWKFNFYEMKGVPIRLEIGPRDV 320

Query: 615 SERSIGIRRFG 625
           + +S+ I R  
Sbjct: 321 TNKSVVISRRD 331


>gi|237704354|ref|ZP_04534835.1| prolyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
 gi|26106541|gb|AAN78727.1|AE016755_227 Prolyl-tRNA synthetase [Escherichia coli CFT073]
 gi|91070839|gb|ABE05720.1| prolyl-tRNA synthetase [Escherichia coli UTI89]
 gi|226902266|gb|EEH88525.1| prolyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
          Length = 590

 Score =  151 bits (380), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 51/249 (20%), Positives = 99/249 (39%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 21  TSQYLLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGVRVLKKVENIVRE 77

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E+  P V    LWQ+SG W+ Y   +  +    D     R F L P +    
Sbjct: 78  EMNNAGAIEVLMPVVQPSELWQESGRWEQYGPELLRIADRGD-----RPFVLGPTHEEVI 132

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 133 TDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHTSQESLQET 191

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   G +   V+  T       S      A++    V+ +  +     I
Sbjct: 192 YDAMYAAYSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFSDTSDYAANI 251

Query: 464 NTGVLLGEG 472
                +   
Sbjct: 252 ELAEAIAPK 260



 Score = 86.0 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 59/178 (33%), Gaps = 13/178 (7%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
           P  +      I R  + G I Q+         A             ++    +G  + R 
Sbjct: 413 PSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDG---RNQILTMGCYGIGVTRV 469

Query: 535 IGIMIENFKGN----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDF 586
           +   IE          P  ++P Q  +  +         E A+++ + L++  + +  D 
Sbjct: 470 VAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLLDD 529

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R E       +  +  IP  I+ GD+      I  +   +   Q +   D +  L K+
Sbjct: 530 RKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVDYLVKQ 587


>gi|237729500|ref|ZP_04559981.1| prolyl-tRNA synthetase [Citrobacter sp. 30_2]
 gi|226909229|gb|EEH95147.1| prolyl-tRNA synthetase [Citrobacter sp. 30_2]
          Length = 590

 Score =  150 bits (379), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 50/249 (20%), Positives = 100/249 (40%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 21  TSQYLLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGVRVLKKVENIVRE 77

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E+  P V    LW++SG W+ Y   +  +    D     R+F L P +    
Sbjct: 78  EMNNAGAIEVLMPVVQPSELWEESGRWEQYGPELLRIADRGD-----RSFVLGPTHEEVI 132

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 133 TDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHTSQESLQET 191

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   G +   V+  T       S      A++    V+ +  +     I
Sbjct: 192 YDAMYAAYSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVIFSDSSDYAANI 251

Query: 464 NTGVLLGEG 472
                +   
Sbjct: 252 EFAEAVAPK 260



 Score = 84.4 bits (207), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 28/166 (16%), Positives = 54/166 (32%), Gaps = 11/166 (6%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE----N 541
           I R  + G I Q+         A             M    +   + R +   IE    +
Sbjct: 423 IKRGIEVGHIFQLGTKYSEAMKAAVQGEDGRNQTLTMGCYGI--GVTRVVAAAIEQNFDD 480

Query: 542 FKGNLPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
                P  ++P Q  +  +         E A+++   L++  + +  D R E       +
Sbjct: 481 RGIVWPDAIAPFQVAILPMNMHKSYRVQELAEKLYAELRAQGIEVLMDDRKERPGVMFAD 540

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             +  IP  I+ GD+      I  +   +   + +   D +  L K
Sbjct: 541 MELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKELIKTGDIVDFLVK 586


>gi|323964912|gb|EGB60378.1| prolyl-tRNA synthetase [Escherichia coli M863]
 gi|327255174|gb|EGE66777.1| prolyl-tRNA synthetase [Escherichia coli STEC_7v]
          Length = 572

 Score =  150 bits (379), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 51/249 (20%), Positives = 99/249 (39%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGVRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E+  P V    LWQ+SG W+ Y   +  +    D     R F L P +    
Sbjct: 60  EMNNAGAIEVLMPVVQPSELWQESGRWEQYGPELLRIADRGD-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHTSQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   G +   V+  T       S      A++    V+ +  +     I
Sbjct: 174 YDAMYAAYSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFSDTSDYAANI 233

Query: 464 NTGVLLGEG 472
                +   
Sbjct: 234 ELAEAIAPK 242



 Score = 86.0 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 59/178 (33%), Gaps = 13/178 (7%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
           P  +      I R  + G I Q+         A             ++    +G  + R 
Sbjct: 395 PSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDG---RNQILTMGCYGIGVTRV 451

Query: 535 IGIMIENFKGN----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDF 586
           +   IE          P  ++P Q  +  +         E A+++ + L++  + +  D 
Sbjct: 452 VAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLLDD 511

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R E       +  +  IP  I+ GD+      I  +   +   Q +   D +  L K+
Sbjct: 512 RKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVDYLVKQ 569


>gi|260881838|ref|ZP_05893576.1| proline--tRNA ligase [Mitsuokella multacida DSM 20544]
 gi|260847809|gb|EEX67816.1| proline--tRNA ligase [Mitsuokella multacida DSM 20544]
          Length = 571

 Score =  150 bits (379), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 51/253 (20%), Positives = 91/253 (35%), Gaps = 16/253 (6%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +            E+E   H+ + R   +   A    G+  +    W+  + +   +R 
Sbjct: 3   ASNLYAPTLRNTPAEAEIASHQLMYRAGMIRKTA---GGMYTFLPLAWRTIRKIEQIIRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +EI  P +     WQ+SG W +Y   M  +K      +  R F L P +    
Sbjct: 60  EMDAAGGQEIMMPILQPAEFWQESGRWGAYGDEMMRIKD-----RHGRDFCLGPTHEEMI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
            A+    ++SY+ELP+ L +    +R+E      GLMR R F   D + F    E M   
Sbjct: 115 TALVRDEVRSYKELPLMLYQIQDKFRDERRPRF-GLMRSREFIMKDLYSFDKDVEGMNES 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL-----DTIKNS 458
             K+++   +I+   G E   V+          S      A+     +      D   + 
Sbjct: 174 YKKMYDAYTNIFTRMGLEFRPVEADNGAIGGGHSHEFTVLADAGESNIAVCTKCDYAASD 233

Query: 459 SQDRINTGVLLGE 471
            +  +       E
Sbjct: 234 EKAELKPVEAPAE 246



 Score = 73.7 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 24/161 (14%), Positives = 51/161 (31%), Gaps = 6/161 (3%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPL 548
           R  + G +       S+         + K  P+++     G        + +N      +
Sbjct: 406 RGIEAGQVFTLGTKYSKAMGATFLDENGKEQPLVMGCYGIGVGRTMAAAIEQNNDDQGIV 465

Query: 549 WLSPIQA------IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
           W   I         V       + YA+ I +  +   L +  D R E    K ++  +  
Sbjct: 466 WPRAIAPFEVVVVAVNAKKEEQLTYAEGIYDECRKAGLDVLLDDRKERAGVKFKDCDLIG 525

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            P+ +  G K   E  I ++   +      +  D +  + +
Sbjct: 526 YPVRVTIGPKAVDEDIIEVKVRKTGEVYNFTRADYLEKVQE 566


>gi|323701857|ref|ZP_08113527.1| prolyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
 gi|323533161|gb|EGB23030.1| prolyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
          Length = 568

 Score =  150 bits (379), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 47/250 (18%), Positives = 96/250 (38%), Gaps = 11/250 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  +        E+E   H+ L R      I +  SG+  +     ++ + +   +R 
Sbjct: 3   TSQMLMPTLREVPAEAEVVSHQLLLRAG---FIRKSASGIYTYLPLAQRVLKKIKEIVRE 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +E+  P V    +W +SG W  Y   +F +K      +  R F L P +    
Sbjct: 60  EMDKQGGQELLMPIVQPAEMWLESGRWHVYGPELFRLKD-----RHNRDFCLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    ++SY+++P+ L +  + +R+E      GLMR R F   D + F   E   +  
Sbjct: 115 TILVRGEVRSYKQMPLLLYQIQNKFRDERRPRF-GLMRGREFIMKDLYSFDRDEAGLDIS 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             K++    +++   G +   V+  +       +      A++    +L   +      I
Sbjct: 174 YQKMYQAYTNVFNRCGLKFRPVEADSGAIGGSDTHEFMVLADSGEAAILFCSQCDYAANI 233

Query: 464 NTGVLLGEGA 473
               +   GA
Sbjct: 234 EKAAVPAAGA 243



 Score = 96.8 bits (239), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 33/166 (19%), Positives = 66/166 (39%), Gaps = 9/166 (5%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I  +         A +++ +  K  P+++     G        + +N   +  
Sbjct: 403 RGIEVGQIFKLGTKYSKALGATFLDENG-KEKPIVMGCYGIGVSRTMAAAIEQNHDQDGI 461

Query: 548 LWLS---PIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W +   P  AIV  ++      ++ A+ + N L    +    D R E    K ++  + 
Sbjct: 462 IWPASIAPYHAIVIPVSAKDEKQMQLAESLYNKLNQIGVETVLDDRAERPGVKFKDADLI 521

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLP 647
             P+ I+ G+K  ++  + +R+  S  T  + L   IP   KE L 
Sbjct: 522 GYPLRIVVGNKAMTDGLVEVRQRKSGQTDLIPLDQ-IPEKVKEILA 566


>gi|294155892|ref|YP_003560276.1| proline--tRNA ligase [Mycoplasma crocodyli MP145]
 gi|291600080|gb|ADE19576.1| proline--tRNA ligase [Mycoplasma crocodyli MP145]
          Length = 478

 Score =  150 bits (379), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 60/420 (14%), Positives = 149/420 (35%), Gaps = 57/420 (13%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
           LE    + +  + ++ +L         +  +    + I++ +   + +  K+ D E +  
Sbjct: 10  LEVDFPKWYTDVVKQGNLIAYGPAKGTL-IFKPNSYGIWELIQENLNKIFKEKDVENVYL 68

Query: 297 PQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P ++ + L+  +  H + +   +  V    D       + ++P +      +F + ++SY
Sbjct: 69  PLLIPESLFNLERDHLEGFNPELATVTHVGDKEL-SEKYFIRPTSEVLFADLFKNSIESY 127

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISI 414
            +LP+   ++ +V R E   + +  +R R F   + H   +         + +       
Sbjct: 128 NDLPIIYNQWANVVRWEK--TTNPFLRSREFLWQEGHTCHSDPIEARRFTRGMITTYSKF 185

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            K+F     ++   T  EK  G                                    A 
Sbjct: 186 LKNFLAIPTIIGKKTPYEKFAG------------------------------------AC 209

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
                E ++KD  GR  Q GT        S+   + +   ++K     +++  +G   R 
Sbjct: 210 STYTIEAMMKD--GRALQAGTSHYLAQNFSK--PYSILFKNKKNEDEYVYQTSWGVSTRL 265

Query: 535 IGIMIENFKGN----LPLWLSPIQAIVTTITSSAVEYAQEIANLLKS---HHLSIETDFR 587
           +G +I     N    +P  ++P+Q  +  + ++     +E+++ L         +  D  
Sbjct: 266 LGAIIMTHGDNRGVIIPPRVAPVQIDLIELFAAKSPKVKEVSDELFELLRRKWRVRVDKS 325

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV---SLLDAIPILTKE 644
           ++   +K     I+ +P+ I  G ++     + + R  +     +    + + +  +  E
Sbjct: 326 DKQPGFKAANSEIQGVPLRIEIGPRDLENNQVTLVRRDTLEKIVMNYKEVKEKVQTILDE 385


>gi|165977268|ref|YP_001652861.1| prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
 gi|226731422|sp|B0BT03|SYP_ACTPJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|165877369|gb|ABY70417.1| prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
          Length = 571

 Score =  150 bits (379), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 64/329 (19%), Positives = 117/329 (35%), Gaps = 17/329 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q   +       +++   H+ + R   +  +A   SG+  W   G K+ + + + +R 
Sbjct: 3   TSQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMA---SGLYNWLPTGIKVLKKVENIIRE 59

Query: 286 KIKDD-YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LWQ+SG W+ Y A +             R F L P +    
Sbjct: 60  EMNKGGAIEVLMPVVQPAELWQESGRWNDYGAELLRFVDRGS-----RDFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP+ L +  + +R+E      G+MR R F   DA+ F   +    E 
Sbjct: 115 TDLVRREVSSYKQLPLNLYQTQTKFRDEVRPRF-GVMRSREFVMKDAYSFHVDKASLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++ +  +I+   G +   V+  T       S      A +    V+ + ++     I
Sbjct: 174 YDVMYQVYSNIFTRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVFSTESDFAANI 233

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
                +  G    P  E  L D          +   FNLP       +          ++
Sbjct: 234 ELAEAVAVGERQAPTAEMQLVDT-PNAKTINELVEQFNLPIEKTVKTLIVKGATEEQSLV 292

Query: 524 HRAVFGSIERFIGIMIENFKGNLPLWLSP 552
              + G  E     + E      PL   P
Sbjct: 293 ALVLRGDHE-----LNEIKAQKHPLVADP 316



 Score = 92.2 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 63/168 (37%), Gaps = 14/168 (8%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           I R  + G I Q+         A       +   P+++    +G  + R +   IE +  
Sbjct: 403 IKRGIEVGHIFQLGTKYSEAMKATVQGEDGK---PLVMTMGCYGIGVTRVVAAAIEQHHD 459

Query: 544 GNLPLWL----SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
               +W     +P    +  +    + S  ++++E+   LK+  + +  D R E      
Sbjct: 460 ERGIIWPSDEIAPFTVAIVPMNMHKSESVQQFSEELYRTLKAQGVDVIFDDRKERPGVMF 519

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +  +  +P +++ G+K  +   I  +   +   Q ++    +  L +
Sbjct: 520 ADMELIGVPHMVVIGEKNLANGEIEYKNRRTGEKQMIAKDQLLAFLKE 567


>gi|260596616|ref|YP_003209187.1| prolyl-tRNA synthetase [Cronobacter turicensis z3032]
 gi|260215793|emb|CBA28231.1| Prolyl-tRNA synthetase [Cronobacter turicensis z3032]
          Length = 572

 Score =  150 bits (379), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 48/223 (21%), Positives = 94/223 (42%), Gaps = 11/223 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGLRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E++ P V    LWQ+SG W+ Y   +       D     R F L P +    
Sbjct: 60  EMNNAGAIEVSMPVVQPAELWQESGRWEQYGPELLRFVDRGD-----RAFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   + 
Sbjct: 115 TDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHTTQESLQQT 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
              +++    I+   G +   V+  T       S      A++
Sbjct: 174 YDAMYDAYSKIFTRMGLDFRPVQADTGSIGGSASHEFQVLAQS 216



 Score = 83.7 bits (205), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 27/176 (15%), Positives = 56/176 (31%), Gaps = 13/176 (7%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
           P  +      I R  + G I Q+         A             ++    +G  + R 
Sbjct: 395 PSPDGQGTLLIKRGIEVGHIFQLGTKYSDALKASVQGEDG---RNQVLTMGCYGIGVTRV 451

Query: 535 IGIMIENFKGN----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDF 586
           +   IE    +     P  ++P Q  +  +         E A+++   L++  + +  D 
Sbjct: 452 VAAAIEQNHDDRGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYAELRAKGIDVLMDD 511

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           R E       +  +  IP  ++ GD+      I  +       + +   D +  L 
Sbjct: 512 RKERPGVMFADMELIGIPHTVVIGDRNLDNDEIEYKYRRDGEKKMIKTGDILDYLV 567


>gi|212710377|ref|ZP_03318505.1| hypothetical protein PROVALCAL_01437 [Providencia alcalifaciens DSM
           30120]
 gi|212686959|gb|EEB46487.1| hypothetical protein PROVALCAL_01437 [Providencia alcalifaciens DSM
           30120]
          Length = 572

 Score =  150 bits (379), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 62/332 (18%), Positives = 122/332 (36%), Gaps = 17/332 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSKYLLSTLKETPADAEVISHKLMLRAGMIRKLA---SGLYDWLPTGVRVLRKVENIVRE 59

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E++ P V    LWQ+SG W+ Y   +       +     R F L P +    
Sbjct: 60  EMENAGAIEVSLPVVQPADLWQESGRWEQYGPELLRFVDRGE-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + + SY++LP+ L +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLVRNEITSYKQLPLNLFQIQTKFRDEVRPRF-GVMRSREFIMKDAYSFHTSQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   GF+   V   T       S      A++    V+ + ++     I
Sbjct: 174 YDAMYEAYSKIFTRIGFDFRAVHADTGSIGGNASHEFQVLAQSGEDDVVFSTESDFAANI 233

Query: 464 NTGVLLGEGAFY-GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
                +        P  E  L D          ++       +     +    +     +
Sbjct: 234 EFAEAVAPNVQRAAPSQEMHLVDTPNAKTIAELVEQFNLPIEKTVKTLIVHAEKDSGHTL 293

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQ 554
           +   + G  E     + E      PL  SP+Q
Sbjct: 294 VALLIRGDHE-----LNEIKAEKHPLVASPLQ 320



 Score = 89.1 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 58/167 (34%), Gaps = 13/167 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           I R  + G I Q+         A   N      H  ++    +G  + R +   IE    
Sbjct: 405 IKRGIEVGHIFQLGTKYSEAMKASVQNEEG---HNQIVTMGCYGIGVTRIVAAAIEQSHD 461

Query: 545 N----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +     P  ++P    +  +         E A+++   LK+  + +  D R E       
Sbjct: 462 DRGIIWPDAIAPFHVAILPMNMHKSYRVKEVAEKLYADLKAQGIDVIFDDRKERPGVMFA 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  +  +P  I+ GD+      +  +   S   Q V L + +  L +
Sbjct: 522 DMELIGVPYTIVIGDRNLDTNQVEYKSRRSDDKQLVGLDNVVSFLKE 568


>gi|83647457|ref|YP_435892.1| prolyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
 gi|114152199|sp|Q2SD07|SYP_HAHCH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|83635500|gb|ABC31467.1| prolyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
          Length = 574

 Score =  150 bits (379), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 43/221 (19%), Positives = 89/221 (40%), Gaps = 11/221 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  +        ++E   H+ + R   +  +A    G+  W   G ++ + + + +R 
Sbjct: 3   ASRYLIATLKETPADAEVISHQLMLRAGMIRKLAA---GLYTWLPLGLRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +E+  P V    LW +SG W+ Y   +  +       +  R F + P +    
Sbjct: 60  EMDRSGAQEVLMPAVQPAELWIESGRWEQYGGELLRIHD-----RHNRDFCVGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNE 403
             +  + LKSY++LP    +    +R+E      G+MR R F   DA+ F   +E +   
Sbjct: 115 TDLIRNELKSYKQLPANFYQIQMKFRDERRPRF-GIMRAREFLMKDAYSFHVNQESLDET 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
            + +++    I+  FG +   V+  +       S      A
Sbjct: 174 YMVMYDAYTRIFTRFGLDFRPVQADSGSIGGSSSHEFHVLA 214



 Score = 82.9 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 22/137 (16%), Positives = 51/137 (37%), Gaps = 9/137 (6%)

Query: 516 EKCHPVMIHRAVFGS-IERFIGIMIE-NFKGNLPLW---LSPIQAIVTTI----TSSAVE 566
           E     ++    +G  + R +   IE        +W   L+P +  +  +    +    E
Sbjct: 434 ENGKATVMQMGCYGIGVSRVVAAAIEQGHDDKGIIWPDALAPFEVALVPLNMHKSDVVRE 493

Query: 567 YAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS 626
            A+ +   L    + +  D RNE    K  E  +  IP  ++  D+  +E  +  +    
Sbjct: 494 KAESLYAELLQAGVDVLLDDRNERPGVKFAEMELIGIPHRVVISDRGLAEGKVEYKGRRD 553

Query: 627 TTTQKVSLLDAIPILTK 643
           T +  +++   +  + +
Sbjct: 554 TDSTDMTVDTVVNFIKE 570


>gi|300813650|ref|ZP_07093972.1| proline--tRNA ligase [Peptoniphilus sp. oral taxon 836 str. F0141]
 gi|300512192|gb|EFK39370.1| proline--tRNA ligase [Peptoniphilus sp. oral taxon 836 str. F0141]
          Length = 570

 Score =  150 bits (379), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 45/222 (20%), Positives = 91/222 (40%), Gaps = 11/222 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +       +++E   H+ L R      I +  SG+  +   G+++ + + + +R +
Sbjct: 4   SKLYMPTLREDPQDAEIVSHKFLLRGG---FIRKSASGIYTYLTLGYRVVRKIENIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +EI    +  + +W+ SG W+ Y   MF +K   D     R F L P       
Sbjct: 61  MDRCGSQEILMSAIQPREIWEDSGRWEKYGPEMFKLKDRHD-----RDFCLGPTAEEYFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +    + SY++LP+ L +  + YR+E      G+ R R F+  DA+ F    E +    
Sbjct: 116 TLIKDEVNSYKDLPLNLYQIQTKYRDEKRPRF-GINRAREFSMKDAYTFDEDLEGLEKSY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
           + ++     ++        +V+         GS      AE+
Sbjct: 175 MNMYRAYEKVFDRLSLNYKIVEGDNGAMGGSGSHEFIALAES 216



 Score = 74.0 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 59/163 (36%), Gaps = 9/163 (5%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I Q+        NA Y++ + +  +  M    + G       I+ +N+  N  
Sbjct: 404 RGIEVGNIFQLGTKYSKSLNATYLDRNGKAQYFYMGSYGI-GITRTVAAIVEQNYDENGI 462

Query: 548 LWLSPIQA------IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W            ++        E  ++I   L+   + +  D R+     K ++  + 
Sbjct: 463 IWPVATAPYECIVTVINPNNEEQKELGEKIYKSLQEKGIEVLIDDRDLRAGVKFKDRDLI 522

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            IP+ I  G K AS+  +           ++S   AI    KE
Sbjct: 523 GIPVRITVGKK-ASDDVVEYSLRKEMKNSEISSQSAIESAIKE 564


>gi|282883093|ref|ZP_06291693.1| proline--tRNA ligase [Peptoniphilus lacrimalis 315-B]
 gi|281297070|gb|EFA89566.1| proline--tRNA ligase [Peptoniphilus lacrimalis 315-B]
          Length = 570

 Score =  150 bits (379), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 45/222 (20%), Positives = 91/222 (40%), Gaps = 11/222 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +       +++E   H+ L R      I +  SG+  +   G+++ + + + +R +
Sbjct: 4   SKLYMPTLREDPQDAEIVSHKFLLRGG---FIRKSASGIYTYLTLGYRVVRKIENIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +EI    +  + +W+ SG W+ Y   MF +K   D     R F L P       
Sbjct: 61  MDRCGSQEILMSAIQPREIWEDSGRWEKYGPEMFKLKDRHD-----RDFCLGPTAEEYFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +    + SY++LP+ L +  + YR+E      G+ R R F+  DA+ F    E +    
Sbjct: 116 TLIKDEVNSYKDLPLNLYQIQTKYRDEKRPRF-GINRAREFSMKDAYTFDEDLEGLEKSY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
           + ++     ++        +V+         GS      AE+
Sbjct: 175 MNMYRAYEKVFDRLSLNYKIVEGDNGAMGGSGSHEFIALAES 216



 Score = 73.7 bits (179), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 59/163 (36%), Gaps = 9/163 (5%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I Q+        NA Y++ + +  +  M    + G       I+ +N+  N  
Sbjct: 404 RGIEVGNIFQLGTKYSKSLNATYLDRNGKAQYFYMGSYGI-GITRTVAAIVEQNYDENGI 462

Query: 548 LWLSPIQA------IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W            ++        E  ++I   L+   + +  D R+     K ++  + 
Sbjct: 463 IWPVATAPYECIVTVINPNNEEQKELGEKIYKSLQEKGIEVLIDDRDLRAGVKFKDRDLI 522

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            IP+ I  G K AS+  +           ++S   AI    KE
Sbjct: 523 GIPVRITVGKK-ASDDVVEYSLRKEMKNSEISSQSAIESAIKE 564


>gi|213423623|ref|ZP_03356603.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E01-6750]
          Length = 322

 Score =  150 bits (379), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 49/248 (19%), Positives = 99/248 (39%), Gaps = 11/248 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGLRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E++ P V    LWQ+SG W+ Y   +       +     R F L P +    
Sbjct: 60  EMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGE-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLVRNELSSYKQLPLNFFQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHTSQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   G +   V+  T       S      A++    ++ +  +     I
Sbjct: 174 YDAMYAAYSRIFSRMGLDFRAVQADTGSIGGNASHEFQVLAQSGEDDIVFSDVSDYAANI 233

Query: 464 NTGVLLGE 471
                +  
Sbjct: 234 ELAEAIAP 241


>gi|157867949|ref|XP_001682528.1| bifunctional aminoacyl-trna synthetase; prolyl-trna synthetase
           [Leishmania major strain Friedlin]
 gi|68125982|emb|CAJ04056.1| putative prolyl-tRNA synthetase [Leishmania major strain Friedlin]
          Length = 731

 Score =  150 bits (379), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 78/408 (19%), Positives = 155/408 (37%), Gaps = 63/408 (15%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ-HLWQQSGHWDSYRAN 317
            D SG        + +++ +  ++  KI+    E+   P  + +  L ++  H + +   
Sbjct: 249 YDVSGCYIIRPWAYYVWKCVQRFLGGKIEKLGVEDCYFPMFVSRSCLEREKDHIEGFAPE 308

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           +  V  A DT  + +  A++P +       +   ++S+R+LPVRL  + +V R E S   
Sbjct: 309 VAWVTRAGDTELE-QPVAVRPTSETVMYPYYAKWIRSHRDLPVRLNMWNNVIRWEFSHPT 367

Query: 378 HGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
              +R R F   + H  +   E+   E L+I     S+Y+      ++    T  EK  G
Sbjct: 368 -PFIRTREFLWQEGHCAWAKAEECAKEVLEILECYASVYEQLLAVPVVRGRKTEKEKFAG 426

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
            D                                    Y    E  ++ A+GR  Q  T 
Sbjct: 427 GD------------------------------------YTTTVETFIE-AVGRGCQGATS 449

Query: 497 Q-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLS 551
             +  N    F+  + +  + +   ++  +  +G   R IG+MI    +N    +P  ++
Sbjct: 450 HNLGQNFGKMFDIRFQDPENNEQT-LIPWQNSWGLSTRVIGVMIMVHGDNRGMVMPPRVA 508

Query: 552 PIQAIVTT--ITSSAVEYAQE--------IANLLKSHHLSIETDFRNE-TINYKIREHSI 600
             Q I+    IT    E A++        + + L    +    D R+  +  ++     +
Sbjct: 509 STQVIIIPVGITKDTTEEARQELLASCWRLESELCEGGVRARCDLRDNYSPGWRFNHWEV 568

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL----DAIPILTKE 644
           K +P+ +  G +E +ERS+ +    S     V+       A+  L ++
Sbjct: 569 KGVPLRVELGPRELAERSLAVAVRHSGARHSVAWDAQTPAAVAALLED 616


>gi|227824508|ref|ZP_03989340.1| prolyl-tRNA synthetase [Acidaminococcus sp. D21]
 gi|226905007|gb|EEH90925.1| prolyl-tRNA synthetase [Acidaminococcus sp. D21]
          Length = 571

 Score =  150 bits (379), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 56/220 (25%), Positives = 89/220 (40%), Gaps = 11/220 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++           E+    H+ + R   +  IA    G+  +    WK  + +   +R +
Sbjct: 4   SKLYAPTLREVPAEAVLESHKLMLRAGYIRKIA---GGLYTYLPLAWKSIKKIERIIREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +   D +EI  P V    +W++SG WD Y A MF V+      +  R F L P +     
Sbjct: 61  MDAIDSQEIMMPIVQPSEIWKESGRWDVYGAEMFRVRD-----RHGREFCLGPTHEEMIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +  + L SYR+LP  L +  S +R+E      GLMR R F   DA+ F   E   +E  
Sbjct: 116 TLVKNELHSYRQLPTSLYQIQSKFRDEKRPRF-GLMRSREFIMKDAYTFDADEAGLDESY 174

Query: 406 -KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
            K+++    I+   G     V+         GS      A
Sbjct: 175 QKMYDAYARIFDRCGLNYRPVEADPGAIGGNGSHEFMGIA 214



 Score = 80.6 bits (197), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 63/170 (37%), Gaps = 11/170 (6%)

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            LK+A G +      ++        +A +++    K  P  +     G   R +  +IE 
Sbjct: 399 HLKEARGIEV-GQVFKLYTKYSEALHATFLDPEG-KEKPFYMGSYGIGV-GRTLAAVIEQ 455

Query: 542 FKGN----LPLWLSPIQAIVTTITSSAVE---YAQEIANLLKSHHLSIETDFRNETINYK 594
           +       +P  ++P + IV  +     E    A EI   L +  +    D R+E    K
Sbjct: 456 YHDANGAIMPKNIAPYEVIVLPVNVKDEESFAKAGEIYQALNAQGIDAILDDRDERAGVK 515

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL-DAIPILTK 643
            ++  +   P+ ++ G K     ++ ++   +     + L  D +  L  
Sbjct: 516 FKDADLIGYPVRVVVGPKTLQRGAMEVKVRYTGEMCDLPLDGDYVSALKD 565


>gi|218547650|ref|YP_002381441.1| prolyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
 gi|226701288|sp|B7LW79|SYP_ESCF3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|218355191|emb|CAQ87798.1| prolyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
 gi|323975637|gb|EGB70733.1| prolyl-tRNA synthetase [Escherichia coli TW10509]
          Length = 572

 Score =  150 bits (379), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 51/249 (20%), Positives = 99/249 (39%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGVRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E+  P V    LWQ+SG W+ Y   +  +    D     R F L P +    
Sbjct: 60  EMNNAGAIEVLMPVVQPSELWQESGRWEQYGPELLRIADRGD-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHTSQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   G +   V+  T       S      A++    V+ +  +     I
Sbjct: 174 YDAMYAAYSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFSDTSDYAANI 233

Query: 464 NTGVLLGEG 472
                +   
Sbjct: 234 ELAEAIAPK 242



 Score = 86.0 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 59/178 (33%), Gaps = 13/178 (7%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
           P  +      I R  + G I Q+         A             ++    +G  + R 
Sbjct: 395 PSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDG---RNQILTMGCYGIGVTRV 451

Query: 535 IGIMIENFKGN----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDF 586
           +   IE          P  ++P Q  +  +         E A+++ + L++  + +  D 
Sbjct: 452 VAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLLDD 511

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R E       +  +  IP  I+ GD+      I  +   +   Q +   D +  L K+
Sbjct: 512 RKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVDYLVKQ 569


>gi|157867947|ref|XP_001682527.1| bifunctional aminoacyl-trna synthetase; prolyl-trna synthetase
           [Leishmania major strain Friedlin]
 gi|68125981|emb|CAJ04054.1| putative prolyl-tRNA synthetase [Leishmania major strain Friedlin]
          Length = 731

 Score =  150 bits (379), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 78/408 (19%), Positives = 155/408 (37%), Gaps = 63/408 (15%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ-HLWQQSGHWDSYRAN 317
            D SG        + +++ +  ++  KI+    E+   P  + +  L ++  H + +   
Sbjct: 249 YDVSGCYIIRPWAYYVWKCVQRFLGGKIEKLGVEDCYFPMFVSRSCLEREKDHIEGFAPE 308

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           +  V  A DT  + +  A++P +       +   ++S+R+LPVRL  + +V R E S   
Sbjct: 309 VAWVTRAGDTELE-QPVAVRPTSETVMYPYYAKWIRSHRDLPVRLNMWNNVIRWEFSHPT 367

Query: 378 HGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
              +R R F   + H  +   E+   E L+I     S+Y+      ++    T  EK  G
Sbjct: 368 -PFIRTREFLWQEGHCAWAKAEECAKEVLEILECYASVYEQLLAVPVVRGRKTEKEKFAG 426

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
            D                                    Y    E  ++ A+GR  Q  T 
Sbjct: 427 GD------------------------------------YTTTVETFIE-AVGRGCQGATS 449

Query: 497 Q-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLS 551
             +  N    F+  + +  + +   ++  +  +G   R IG+MI    +N    +P  ++
Sbjct: 450 HNLGQNFGKMFDIRFQDPENNEQT-LIPWQNSWGLSTRVIGVMIMVHGDNRGMVMPPRVA 508

Query: 552 PIQAIVTT--ITSSAVEYAQE--------IANLLKSHHLSIETDFRNE-TINYKIREHSI 600
             Q I+    IT    E A++        + + L    +    D R+  +  ++     +
Sbjct: 509 STQVIIIPVGITKDTTEEARQELLASCWRLESELCEGGVRARCDLRDNYSPGWRFNHWEV 568

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL----DAIPILTKE 644
           K +P+ +  G +E +ERS+ +    S     V+       A+  L ++
Sbjct: 569 KGVPLRVELGPRELAERSLAVAVRHSGARHSVAWDAQTPAAVAALLED 616


>gi|262341274|ref|YP_003284129.1| proline-tRNA ligase [Blattabacterium sp. (Blattella germanica) str.
           Bge]
 gi|262272611|gb|ACY40519.1| proline-tRNA ligase [Blattabacterium sp. (Blattella germanica) str.
           Bge]
          Length = 488

 Score =  150 bits (379), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 74/437 (16%), Positives = 162/437 (37%), Gaps = 73/437 (16%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
              E   + + ++  +  L   +     +I     G+ +++ +   + + +K+  ++ + 
Sbjct: 6   KRREDYSKWYNEIVVKSGLAEFSGVRGFMIV-KPYGYSLWEKMKQELDKMLKNTGHKNVY 64

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAV------------KCADDTIKDLRTFALKPMNCPG 343
            P ++ + ++ +        +   AV               D   +      ++P +   
Sbjct: 65  FPLLIPKSVFSKEKEHTEIFSEGCAVVTHSRLKKNKEELIIDPESRLQEELVIRPTSESI 124

Query: 344 HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFN 402
               +   ++SYR+LPV L ++G+  R E        +R   F   + H    TK++   
Sbjct: 125 IWKTYKRWIQSYRDLPVLLNQWGNALRWEMR--TRLFLRTTEFLWQEGHTAHSTKKEAIE 182

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
           E  KI N+     ++F    ++  +    +K  GS+  +                     
Sbjct: 183 EANKILNIYTDFSENFMAIPVLQGIKPHMDKFYGSEKTY--------------------- 221

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPV 521
                            E +++D  G+  Q GT   +  N    F+  + N + +K +  
Sbjct: 222 ---------------CIEALMQD--GKALQIGTSHFLGQNFSKAFDVQFTNYNGKKEY-- 262

Query: 522 MIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTITSS------AVEYAQEI 571
            +    +G   R IG +I +   +    LP  ++PIQ ++  I  +        +  ++I
Sbjct: 263 -VWSTSWGVSTRLIGGLIMSHSDDKGLILPPKIAPIQIVIIPIYKNKEKFGIINDVVEKI 321

Query: 572 ANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
            N+L+   + ++ D R   T  +K  E+ +K +P+ I  G  E     + I R  +    
Sbjct: 322 LNVLEQERIRVKYDNRVTFTPGWKFHEYEMKGVPLRISIGSNEIKNEKVEIFRRDTYEKI 381

Query: 631 KVS---LLDAIPILTKE 644
            +S   L + IP L  +
Sbjct: 382 YISWINLKNLIPKLLDD 398


>gi|322616066|gb|EFY12983.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 315996572]
 gi|322620849|gb|EFY17709.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-1]
 gi|322623800|gb|EFY20637.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-3]
 gi|322627248|gb|EFY24039.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-4]
 gi|322630555|gb|EFY27319.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 515920-1]
 gi|322638227|gb|EFY34928.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 515920-2]
 gi|322645504|gb|EFY42031.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. NC_MB110209-0054]
 gi|322648203|gb|EFY44670.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. OH_2009072675]
 gi|322657523|gb|EFY53795.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 19N]
 gi|322663843|gb|EFY60043.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 81038-01]
 gi|322666676|gb|EFY62854.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MD_MDA09249507]
 gi|322672166|gb|EFY68278.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 414877]
 gi|322676523|gb|EFY72594.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 366867]
 gi|322679385|gb|EFY75430.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 413180]
 gi|323193468|gb|EFZ78676.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 609458-1]
 gi|323197510|gb|EFZ82645.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 556150-1]
 gi|323201221|gb|EFZ86290.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 609460]
 gi|323209616|gb|EFZ94549.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 507440-20]
 gi|323212132|gb|EFZ96956.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 556152]
 gi|323216437|gb|EGA01163.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB101509-0077]
 gi|323223373|gb|EGA07708.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB102109-0047]
 gi|323225934|gb|EGA10154.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB110209-0055]
 gi|323228525|gb|EGA12654.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB111609-0052]
 gi|323236862|gb|EGA20938.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 2009083312]
 gi|323239638|gb|EGA23685.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 2009085258]
 gi|323242315|gb|EGA26344.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 315731156]
 gi|323249977|gb|EGA33873.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2009159199]
 gi|323252407|gb|EGA36258.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008282]
 gi|323255690|gb|EGA39443.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008283]
 gi|323262873|gb|EGA46423.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008284]
 gi|323265359|gb|EGA48855.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008285]
 gi|323271854|gb|EGA55272.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008287]
          Length = 572

 Score =  150 bits (378), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 64/367 (17%), Positives = 130/367 (35%), Gaps = 33/367 (8%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGLRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E++ P V    LWQ+SG W+ Y   +       +     R F L P +    
Sbjct: 60  EMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGE-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLVRNELSSYKQLPLNFFQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHTSQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   G +   V+  T       S      A++    ++ +  +     I
Sbjct: 174 YDAMYAAYSRIFSRMGLDFRAVQADTGSIGGNASHEFQVLAQSGEDDIVFSDVSDYAANI 233

Query: 464 NTGVLLGEGAFYGPKF-EYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPV 521
                +           E  L D          + Q +  +        V +  +   P+
Sbjct: 234 ELAEAIAPQTPRAAATQEMTLVDTPNAKTIAELVEQFNLPIEKTVKTLLVKAAKDSKSPL 293

Query: 522 M--------------------IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT 561
           +                    +   +  + E  I  +I    G+L     PI  I+    
Sbjct: 294 VALLVRGDHELNEVKAEKLPHVASPLTFATEEEIRAVINAGPGSLGPVNMPIPVIIDRTV 353

Query: 562 SSAVEYA 568
            +  ++A
Sbjct: 354 DAMSDFA 360



 Score = 83.7 bits (205), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 57/177 (32%), Gaps = 13/177 (7%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
           P  +      I R  + G I Q+         A             ++    +G  + R 
Sbjct: 395 PSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDG---RNQILTMGCYGIGVTRV 451

Query: 535 IGIMIENF----KGNLPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDF 586
           +   IE          P  ++P Q  +  +         E A+++ + L++  + +  D 
Sbjct: 452 VAAAIEQNFDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLMDD 511

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           R E       +  +  IP  I+ GD+      I  +   S     +   D +  L K
Sbjct: 512 RKERPGVMFADMELIGIPHTIVIGDRNLDNDDIEYKYRRSGEKSLIKTGDIVDYLVK 568


>gi|326795786|ref|YP_004313606.1| prolyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
 gi|326546550|gb|ADZ91770.1| Prolyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
          Length = 577

 Score =  150 bits (378), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 44/247 (17%), Positives = 96/247 (38%), Gaps = 13/247 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +    +       ++    H+ + R   +  I++   G+  W   G ++ + + + +R 
Sbjct: 3   ASNYLFSTLRDAPTDAVVTSHQLMVRAGMIRQISK---GLYTWLPTGLRVLKKVENIVRD 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           +++     E+  P V    LW++SG W  Y   +  +K      +  R + L P +    
Sbjct: 60  EMEKAGALEVMMPGVQPAELWEESGRWQKYGPELLRMKD-----RHNRDYCLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+   +  + +R+E      G+MR R F   DA+ F +      + 
Sbjct: 115 TELARNELTSYKQLPINFFQIQTKFRDEVRPRF-GVMRSREFIMKDAYSFHSNSDSLRQT 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +H    +++   G +   V+  T       S      A++    +     +SS+   
Sbjct: 174 YDVMHQAYCNVFDRIGLDYRPVQADTGSIGGAYSHEFHVLAQSGEDDI--AFSDSSEFAA 231

Query: 464 NTGVLLG 470
           N  +   
Sbjct: 232 NVELAEA 238



 Score = 93.3 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 61/168 (36%), Gaps = 13/168 (7%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NF 542
            I R  + G I Q+         A  ++ + +      +    +G  + R +   IE NF
Sbjct: 408 VIKRGIEVGHIFQLGQQYSEALRASVLDENGKAQT---MWMGCYGIGVSRIVAAAIEQNF 464

Query: 543 KGNLPLWL---SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
                LW    +P    +  +    + +  +    + N LK   + +  D R E    K 
Sbjct: 465 DDKGILWPESITPFSVAIIAMNYDKSEAVRDECDHLYNELKQLGIDVLLDDRKERPGVKF 524

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +  +  IP  ++ GDK     S+  +   +   + V   +A+  + K
Sbjct: 525 ADCELLGIPHRLVVGDKGLKNNSLEYKYRKTGEGEDVPKDEAVKFIRK 572


>gi|269837371|ref|YP_003319599.1| prolyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
 gi|269786634|gb|ACZ38777.1| prolyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
          Length = 483

 Score =  150 bits (378), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 65/432 (15%), Positives = 163/432 (37%), Gaps = 56/432 (12%)

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR 284
            + +++  + L  +E+   R + ++ R  +L   +      +     G+ +++ + + + 
Sbjct: 1   MSDERKYVEELSDVEDDFDRWYVEVVRRAELADESPVRGTRVV-RPYGFALWENMQAELD 59

Query: 285 RKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
           R+IK+   +    P  + Q +   ++ H + +   +  V    +   +   +A++P +  
Sbjct: 60  RRIKETGVQNAYFPLFIPQSMLAREAEHVEGFAPEVAWVTRGGNKELE-EPWAVRPTSEA 118

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMF 401
               ++   ++SYR+LP+ + ++ SV R E        +R   F   + H    T E+  
Sbjct: 119 IICPMYARWVQSYRDLPILINQWNSVVRWEERP--RAFLRSLEFLWQEGHTAHATLEEAE 176

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
                +  +     +      ++    T  EK  G+   +          ++ +    + 
Sbjct: 177 ERTRLMLEVYRDFVETELAVPVIPGRKTESEKFAGALRTYT---------IEAMMGGKKW 227

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
            + +G     G            D  GR                F   +++ + E+ +  
Sbjct: 228 ALQSGTSHNLG------------DHFGRV---------------FGIEFLDRNGERRYAF 260

Query: 522 MIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI--TSSAVEYAQEIANLL 575
                 +G   R +G +I    ++    LP  ++PIQ ++  I    S  E  +   + +
Sbjct: 261 ---NTSWGLSFRMVGAVIMVHGDDRGLKLPPRVAPIQVVIVPIWRKESEREAVEAAVDRV 317

Query: 576 KSHH---LSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
           +        +  D R++ T  +K  E  +K +P+ +  G ++ +   + + R  +   Q 
Sbjct: 318 RDALLPVARVFVDRRDDKTPGWKFNEWELKGVPVRLEIGPRDVANDQVTLVRRDTHEKQA 377

Query: 632 VSLLDAIPILTK 643
           +S+ D    +T+
Sbjct: 378 ISITDLAGRITE 389


>gi|156083641|ref|XP_001609304.1| prolyl-tRNA synthetase [Babesia bovis T2Bo]
 gi|154796555|gb|EDO05736.1| prolyl-tRNA synthetase, putative [Babesia bovis]
          Length = 705

 Score =  150 bits (378), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 80/525 (15%), Positives = 172/525 (32%), Gaps = 66/525 (12%)

Query: 148 ELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGP-----HVRSTGQVKKFFKLMK 202
            +   K    KV + E I  ++ +  +       +C         +R       F     
Sbjct: 126 AVVNDKNNEVKVLLDERIKEQKEIMAHALHNTTSVCISTEDLLRFLRENNHEPTFVATCG 185

Query: 203 VAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDG 262
                 +  + +P +S+      + +  +       + +    + +      +     D 
Sbjct: 186 EETEV-QPSAAQPAVSQPATANADKEGHILGITVKKDTNFPEWYTQAIIRGGMVEY-YDI 243

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVL--DQHLWQQSGHWDSYRANMFA 320
           SG   +    + I++    +    IK +  E     +    Q L  +  H + +   +  
Sbjct: 244 SGCYIYLPSSYFIWEVFQQWFNENIKKEGVENCYFPMFVSKQKLETEKNHIEGFSPEVAW 303

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           V    D+   +   A++P +       F+  ++S+R+LP++L ++ SV R E        
Sbjct: 304 VTKYGDSDF-VEPIAIRPTSETIMYPEFSKWIRSHRDLPLKLNQWCSVVRWEFKQPT-PF 361

Query: 381 MRVRGFTQDDAHVFCTKEQMFNEC-LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDA 439
           +R R F   + H     E+      + +  L    Y++F    ++    +  E+  G   
Sbjct: 362 LRSREFLWQEGHTAHKSEEDAMNTVMTMLRLYQRFYEEFLAVPVIPGEKSVEERFAGG-- 419

Query: 440 LWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-V 498
               +   ++                         Y P          GR  Q  T   +
Sbjct: 420 ---KSTMTIEA------------------------YIP--------GSGRGIQAATSHLL 444

Query: 499 DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQ 554
             N    F+  + + +  K    + H+  +G   R IG+ I     +  L + P    +Q
Sbjct: 445 GTNFAKMFDIVFEDENGVKQ---LAHQTSWGFTTRSIGVSIMIHGDDQGLVIPPRVSKVQ 501

Query: 555 AIVTTIT------SSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIII 607
            ++  I          +  A+++   LK        D R   T  +K     ++ +P+ I
Sbjct: 502 IVIVPIIAKKELQKDIMAVAEDMYARLKKAGFRTHLDDRVGYTPGFKFNHWELRGVPLRI 561

Query: 608 ICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
             G ++   +S  +    +     V L + +     E+L  D Q+
Sbjct: 562 EIGARDIQTQSCRVCYRYNGHKTDVKL-ETLEQSIGEAL-EDIQR 604


>gi|306815206|ref|ZP_07449355.1| prolyl-tRNA synthetase [Escherichia coli NC101]
 gi|305850868|gb|EFM51323.1| prolyl-tRNA synthetase [Escherichia coli NC101]
          Length = 572

 Score =  150 bits (378), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 51/249 (20%), Positives = 99/249 (39%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGVRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E+  P V    LWQ+SG W+ Y   +  +    D     R F L P +    
Sbjct: 60  EMNNAGAIEVLMPVVQPSELWQESGRWEQYGPELLRIADRGD-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHTSQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   G +   V+  T       S      A++    V+ +  +     I
Sbjct: 174 YDAMYAAYSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFSDTSDYAANI 233

Query: 464 NTGVLLGEG 472
                +   
Sbjct: 234 ELAEAIAPK 242



 Score = 85.6 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 59/178 (33%), Gaps = 13/178 (7%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
           P  +      I R  + G I Q+         A             ++    +G  + R 
Sbjct: 395 PSPDGQGSLLIKRGIEVGHIFQLGTKYSEALKASVQGEDG---RNQILTMGCYGIGVTRV 451

Query: 535 IGIMIENFKGN----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDF 586
           +   IE          P  ++P Q  +  +         E A+++ + L++  + +  D 
Sbjct: 452 VAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLLDD 511

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R E       +  +  IP  I+ GD+      I  +   +   Q +   D +  L K+
Sbjct: 512 RKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVDYLVKQ 569


>gi|110640415|ref|YP_668143.1| prolyl-tRNA synthetase [Escherichia coli 536]
 gi|117622479|ref|YP_851392.1| prolyl-tRNA synthetase [Escherichia coli APEC O1]
 gi|161486316|ref|NP_752183.2| prolyl-tRNA synthetase [Escherichia coli CFT073]
 gi|162138494|ref|YP_539251.2| prolyl-tRNA synthetase [Escherichia coli UTI89]
 gi|170680577|ref|YP_001742323.1| prolyl-tRNA synthetase [Escherichia coli SMS-3-5]
 gi|191171415|ref|ZP_03032964.1| prolyl-tRNA synthetase [Escherichia coli F11]
 gi|215485356|ref|YP_002327787.1| prolyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69]
 gi|218557136|ref|YP_002390049.1| prolyl-tRNA synthetase [Escherichia coli S88]
 gi|218688070|ref|YP_002396282.1| prolyl-tRNA synthetase [Escherichia coli ED1a]
 gi|227884892|ref|ZP_04002697.1| proline--tRNA ligase [Escherichia coli 83972]
 gi|300977725|ref|ZP_07174019.1| prolyl-tRNA synthetase [Escherichia coli MS 45-1]
 gi|300990442|ref|ZP_07179210.1| prolyl-tRNA synthetase [Escherichia coli MS 200-1]
 gi|301046653|ref|ZP_07193784.1| prolyl-tRNA synthetase [Escherichia coli MS 185-1]
 gi|331661266|ref|ZP_08362198.1| proline--tRNA ligase [Escherichia coli TA206]
 gi|331681580|ref|ZP_08382217.1| proline--tRNA ligase [Escherichia coli H299]
 gi|114152192|sp|Q8FKZ4|SYP_ECOL6 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|114152193|sp|Q1RFZ4|SYP_ECOUT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|123148404|sp|Q0TLD7|SYP_ECOL5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|152112309|sp|A1A7N8|SYP_ECOK1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226699141|sp|B7MBH6|SYP_ECO45 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226701285|sp|B1LGZ7|SYP_ECOSM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|254782899|sp|B7UJ96|SYP_ECO27 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|254782901|sp|B7MP55|SYP_ECO81 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|110342007|gb|ABG68244.1| prolyl-tRNA synthetase [Escherichia coli 536]
 gi|115511603|gb|ABI99677.1| prolyl-tRNA synthetase [Escherichia coli APEC O1]
 gi|170518295|gb|ACB16473.1| prolyl-tRNA synthetase [Escherichia coli SMS-3-5]
 gi|190908349|gb|EDV67939.1| prolyl-tRNA synthetase [Escherichia coli F11]
 gi|215263428|emb|CAS07748.1| prolyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69]
 gi|218363905|emb|CAR01570.1| prolyl-tRNA synthetase [Escherichia coli S88]
 gi|218425634|emb|CAR06420.1| prolyl-tRNA synthetase [Escherichia coli ED1a]
 gi|222032025|emb|CAP74764.1| Prolyl-tRNA synthetase [Escherichia coli LF82]
 gi|227838141|gb|EEJ48607.1| proline--tRNA ligase [Escherichia coli 83972]
 gi|294489624|gb|ADE88380.1| prolyl-tRNA synthetase [Escherichia coli IHE3034]
 gi|300301388|gb|EFJ57773.1| prolyl-tRNA synthetase [Escherichia coli MS 185-1]
 gi|300305742|gb|EFJ60262.1| prolyl-tRNA synthetase [Escherichia coli MS 200-1]
 gi|300409810|gb|EFJ93348.1| prolyl-tRNA synthetase [Escherichia coli MS 45-1]
 gi|307552047|gb|ADN44822.1| prolyl-tRNA synthetase [Escherichia coli ABU 83972]
 gi|307629771|gb|ADN74075.1| prolyl-tRNA synthetase [Escherichia coli UM146]
 gi|312944803|gb|ADR25630.1| prolyl-tRNA synthetase [Escherichia coli O83:H1 str. NRG 857C]
 gi|315285273|gb|EFU44718.1| prolyl-tRNA synthetase [Escherichia coli MS 110-3]
 gi|315295532|gb|EFU54858.1| prolyl-tRNA synthetase [Escherichia coli MS 153-1]
 gi|315300667|gb|EFU59894.1| prolyl-tRNA synthetase [Escherichia coli MS 16-3]
 gi|323950806|gb|EGB46683.1| prolyl-tRNA synthetase [Escherichia coli H252]
 gi|323955077|gb|EGB50853.1| prolyl-tRNA synthetase [Escherichia coli H263]
 gi|324008226|gb|EGB77445.1| prolyl-tRNA synthetase [Escherichia coli MS 57-2]
 gi|324014120|gb|EGB83339.1| prolyl-tRNA synthetase [Escherichia coli MS 60-1]
 gi|324112394|gb|EGC06371.1| prolyl-tRNA synthetase [Escherichia fergusonii B253]
 gi|325496126|gb|EGC93985.1| prolyl-tRNA synthetase [Escherichia fergusonii ECD227]
 gi|331052308|gb|EGI24347.1| proline--tRNA ligase [Escherichia coli TA206]
 gi|331081801|gb|EGI52962.1| proline--tRNA ligase [Escherichia coli H299]
          Length = 572

 Score =  150 bits (378), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 51/249 (20%), Positives = 99/249 (39%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGVRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E+  P V    LWQ+SG W+ Y   +  +    D     R F L P +    
Sbjct: 60  EMNNAGAIEVLMPVVQPSELWQESGRWEQYGPELLRIADRGD-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHTSQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   G +   V+  T       S      A++    V+ +  +     I
Sbjct: 174 YDAMYAAYSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFSDTSDYAANI 233

Query: 464 NTGVLLGEG 472
                +   
Sbjct: 234 ELAEAIAPK 242



 Score = 86.0 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 59/178 (33%), Gaps = 13/178 (7%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
           P  +      I R  + G I Q+         A             ++    +G  + R 
Sbjct: 395 PSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDG---RNQILTMGCYGIGVTRV 451

Query: 535 IGIMIENFKGN----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDF 586
           +   IE          P  ++P Q  +  +         E A+++ + L++  + +  D 
Sbjct: 452 VAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLLDD 511

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R E       +  +  IP  I+ GD+      I  +   +   Q +   D +  L K+
Sbjct: 512 RKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVDYLVKQ 569


>gi|282899245|ref|ZP_06307218.1| Prolyl-tRNA synthetase [Cylindrospermopsis raciborskii CS-505]
 gi|281195881|gb|EFA70805.1| Prolyl-tRNA synthetase [Cylindrospermopsis raciborskii CS-505]
          Length = 603

 Score =  150 bits (378), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 58/249 (23%), Positives = 99/249 (39%), Gaps = 8/249 (3%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q+          ++E   H+ L R   +  I   GSGV  +    W++ Q +   +R +
Sbjct: 4   SQKLFVTLRDDPADAEIPSHKLLLRAGYIRRI---GSGVYAYLPLMWRVLQKISQIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     EE   PQ+    LW++SG WD+Y      +    D  +  +   L P +     
Sbjct: 61  MNATGAEECLLPQLQPAELWKESGRWDTYTKAEGIMFSLID--RREQHLGLGPTHEEVIT 118

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    ++SYR+LPV L +  + +R+E      GLMR R F   D + F T E+   +  
Sbjct: 119 TIGRDMIRSYRQLPVHLYQIQTKFRDEIRPRF-GLMRGREFIMKDGYSFHTDEESLKKTY 177

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
           + ++    +I +  G     V+  +      GS      A+     VL T        + 
Sbjct: 178 QDMYQAYSNILRRCGLAFRAVEADSGAIGGSGSTEFMVLADAGEDEVLYTQDGKYAANVE 237

Query: 465 TGVLLGEGA 473
             V L   A
Sbjct: 238 KAVSLPADA 246



 Score = 83.3 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 32/160 (20%), Positives = 64/160 (40%), Gaps = 9/160 (5%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I Q+         A Y N   E+  P+++     G        + +++ G+  
Sbjct: 435 RGIEAGHIFQLGTKYSLAMGATYTNEQGEEK-PLVMGCYGVGVSRLAQSAVEQSYDGDGI 493

Query: 548 LWL---SPIQAIV-TTITSS--AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W    +P  AI+          VE A++I   L    +    D RNE    K ++  + 
Sbjct: 494 IWPVAIAPYHAIISIPNIKDTHQVEIAEKIYTELNKVGIETLLDDRNERAGVKFKDADLI 553

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            IP  I+ G +  S   + +    +  +Q++++ + +  L
Sbjct: 554 GIPYRIVTG-RSISHGKVEVVTRATRESQEIAIENLVDTL 592


>gi|88705599|ref|ZP_01103309.1| prolyl-tRNA synthetase [Congregibacter litoralis KT71]
 gi|88700112|gb|EAQ97221.1| prolyl-tRNA synthetase [Congregibacter litoralis KT71]
          Length = 571

 Score =  150 bits (378), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 45/240 (18%), Positives = 93/240 (38%), Gaps = 11/240 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +T +     ++E   HR + R   +  ++   SG+  W   G ++ + +   +R +
Sbjct: 4   SEFLITTHKETPADAEIISHRLMLRAGLIRKLS---SGLYTWMPMGLRVLRKVERVVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P V    LW++SG W+ Y   +  ++      +  R F L P +     
Sbjct: 61  MDASGALELAMPMVQPAELWEESGRWEQYGPELLRIQD-----RHQRDFCLGPTHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +  + + SY++LP+ L +  +  R+E      G+MR R F   DA+ F           
Sbjct: 116 DIVRNEISSYKQLPLNLYQIQNKVRDEIRPRF-GVMRAREFLMKDAYSFHADATSLEATY 174

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
             +H     I++  G +   V   +       S      A++    +  +  +     I 
Sbjct: 175 GVMHGAYTRIFERLGLDFRPVMADSGSIGGNTSHEFHVLADSGEDAIAFSDGSDYAANIE 234



 Score = 86.0 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/168 (20%), Positives = 68/168 (40%), Gaps = 13/168 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           I R  + G I Q+        NA  ++        V +    +G  + R +   IE    
Sbjct: 402 IRRGIEVGHIFQLGTKYSEAMNARVLDETG---RNVTLSMGCYGIGVSRIVAAAIEQNHD 458

Query: 545 N----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +     P  ++P Q  +  +    +++  E A+ +     +  + +  D RNE    K  
Sbjct: 459 DRGIIWPSAMAPFQLAIVPLNMHKSAAVAEAAETLHQECLALGIEVLMDDRNERPGVKFA 518

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  +  IP  I+ GD+  +E  I  +      +Q+V+L +A+  +T +
Sbjct: 519 DMELLGIPHRIVIGDRSLAEGEIEYQGRRDADSQRVALTEAMSFITAQ 566


>gi|282896497|ref|ZP_06304517.1| Prolyl-tRNA synthetase [Raphidiopsis brookii D9]
 gi|281198603|gb|EFA73484.1| Prolyl-tRNA synthetase [Raphidiopsis brookii D9]
          Length = 604

 Score =  150 bits (378), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 58/249 (23%), Positives = 99/249 (39%), Gaps = 8/249 (3%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q+          ++E   H+ L R   +  I   GSGV  +    W++ Q +   +R +
Sbjct: 5   SQKLFVTLRDDPADAEIPSHKLLLRAGYIRRI---GSGVYAYLPLMWRVLQKISQIIREE 61

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     EE   PQ+    LW++SG WD+Y      +    D  +  +   L P +     
Sbjct: 62  MNATGAEECLLPQLQPAELWKESGRWDTYTKAEGIMFSLID--RREQHLGLGPTHEEVIT 119

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    ++SYR+LPV L +  + +R+E      GLMR R F   D + F T E+   +  
Sbjct: 120 TIGRDMIRSYRQLPVHLYQIQTKFRDEIRPRF-GLMRGREFIMKDGYSFHTDEESLKKTY 178

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
           + ++    +I +  G     V+  +      GS      A+     VL T        + 
Sbjct: 179 QDMYKAYSNILRRCGLAFRAVEADSGAIGGSGSTEFMVLADAGEDEVLYTQDGKYAANVE 238

Query: 465 TGVLLGEGA 473
             V L   A
Sbjct: 239 KAVSLPADA 247



 Score = 84.1 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 64/160 (40%), Gaps = 9/160 (5%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I Q+         A Y N   E+  P+++     G        + +++ G+  
Sbjct: 436 RGIEAGHIFQLGTKYSLAMGATYTNEQGEEK-PLVMGCYGVGVSRLAQSAVEQSYDGDGI 494

Query: 548 LWL---SPIQAIV-TTITSS--AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W    +P  AI+          VE A++I   L    +    D RNE    K ++  + 
Sbjct: 495 IWPVAIAPYHAIISIPNIKDSQQVEIAEKIYTELNKVGIETLLDDRNERAGVKFKDADLI 554

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            IP  I+ G +  +   + +    +  ++++++ D +  L
Sbjct: 555 GIPYRIVTG-RSITHGKVEVVTRATRESKEIAIEDLVNTL 593


>gi|114152232|sp|Q3IGT7|SYP_PSEHT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
          Length = 574

 Score =  150 bits (378), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 51/249 (20%), Positives = 98/249 (39%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L        ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYILATLKETPSDAEIVSHQLMLRAGMIRRVA---SGLYTWLPTGLRVLRKVENIVRE 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++   +  E+  P +    LW++SG WD +   +        T +  RTFAL P +    
Sbjct: 60  EMNKANAIEMLMPVIQPADLWEESGRWDEFGPELMRF-----TDRHNRTFALGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
                  + SY++LP+ L +  +  R+E      G+MR R FT  DA+ F   ++  +  
Sbjct: 115 TDFVRKEISSYKQLPISLYQIQTKVRDERRPRF-GVMRAREFTMKDAYSFHLSDECLDAT 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            + +H    +I++    +   V   T       S      AE+    +  +  +     I
Sbjct: 174 YQVMHKAYCNIFERLNLDYRPVIADTGSIGGSVSHEFHVLAESGEDAIAFSDGSDYAANI 233

Query: 464 NTGVLLGEG 472
                L   
Sbjct: 234 EKAEALAPS 242



 Score = 79.4 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/166 (16%), Positives = 55/166 (33%), Gaps = 13/166 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           I R  + G I Q+         A  +N   +     ++    +G  + R +   IE    
Sbjct: 407 IKRGIEVGHIFQLGTKYSQAMKAGVLNESGKNQ---IMTMGCYGIGVSRIVAAAIEQNND 463

Query: 545 NLPL-WLSPIQAIVTTITSSAV-------EYAQEIANLLKSHHLSIETDFRNETINYKIR 596
              + W  PI      I    +       + A  +   LK   L +  D R E       
Sbjct: 464 QYGIIWPQPIAPFDLAIVPMNMHKSHRIPDIATNLYQGLKDAGLDVLFDDRKERPGVMFN 523

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +  +  +P  ++ G++   E  + ++   +     + +  AI  + 
Sbjct: 524 DMELIGVPFTLVIGERNLDENKVELKNRRTGEKLMIDIDTAIDAIK 569


>gi|253995828|ref|YP_003047892.1| prolyl-tRNA synthetase [Methylotenera mobilis JLW8]
 gi|253982507|gb|ACT47365.1| prolyl-tRNA synthetase [Methylotenera mobilis JLW8]
          Length = 573

 Score =  150 bits (378), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 44/221 (19%), Positives = 88/221 (39%), Gaps = 11/221 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q           E+E + H  + R   +  +   GSG+  W   G ++ + +   +R 
Sbjct: 3   ASQFFFNTQKEAPNEAELQSHILMVRAGLIKRL---GSGLYSWMPLGLRVLRKVERVVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E+  P V  + LW+++G W  +   M  ++      +  R F   P +    
Sbjct: 60  EMNNAGALELLMPAVQPKELWEETGRWAVFGPQMLKIQD-----RHEREFCFGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    ++SY++LP+   +  + +R+E      G+MR R F   DA+ F T      + 
Sbjct: 115 TDIARKEIRSYKQLPLNFYQIQTKFRDEIRPRF-GVMRAREFMMKDAYSFHTDFASLEQT 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
              ++    +++   G +   VK  T      GS      A
Sbjct: 174 YDTMYQAYSNVFTRLGLKFRAVKADTGAIGGDGSHEFHVLA 214



 Score = 87.1 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 65/165 (39%), Gaps = 13/165 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN- 545
           R  + G I Q+        +A Y++ + +     ++    +G  + R +G  IE      
Sbjct: 410 RGIEVGHIFQLRTKYSEAMSATYLDENGQTQ---VMEMGCYGIGVSRIVGAAIEQGNDER 466

Query: 546 ---LPLWLSPIQAIVTTITSSAVEYAQ----EIANLLKSHHLSIETDFRNETINYKIREH 598
               P  ++P + ++  I     E  Q    ++ + L++  + +  D R E       E 
Sbjct: 467 GIIFPKSMAPFEVVICAIGYDKSEAVQAATKKLHDELQAAGVDVLLDDRGERPGVMFAEA 526

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +  IP  ++ G++  +E ++  +       Q V+L   +  + K
Sbjct: 527 DLMGIPHRLVIGERGLNEGNVEYKARTQADAQSVALASVVEFVQK 571


>gi|221485669|gb|EEE23950.1| threonyl-tRNA synthetase, putative [Toxoplasma gondii GT1]
          Length = 1151

 Score =  150 bits (378), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 86/270 (31%), Positives = 127/270 (47%), Gaps = 55/270 (20%)

Query: 356  RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
            R LP+R++EFG V+R E   +L GL R+R FTQDD H+ CT+EQ   E       I+ +Y
Sbjct: 904  RHLPLRISEFGRVFRRERRSALCGLFRLREFTQDDGHILCTREQAVEEIKVQLASILHLY 963

Query: 416  -KDFGFEKIMVKL---------STRPEKRVGSDA--LWDDAENIMKGVLDTIKNSSQDRI 463
             + FG     VK+         S R +    S+   LW  AE  +      +  ++    
Sbjct: 964  VQVFGISPECVKVSLGSRPAKASRRSDASADSEDEKLWTQAEAWLMEAAREVLPNAS--- 1020

Query: 464  NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
            +     G GAFYGPK ++ L D  GR WQ GT+Q                       V+I
Sbjct: 1021 SVETEEGGGAFYGPKLDFSLSDVQGRWWQTGTLQPL---------------------VLI 1059

Query: 524  HRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITS---SAVEYAQEIANLLKS--- 577
            HRA  GS+ERF+ +++E   G+LP+WL+P++A+V  ++       EYA+ +A +L+    
Sbjct: 1060 HRAAVGSLERFLALLLELRNGDLPVWLAPVKAVVCPVSVQSREIREYAERVATVLRESVA 1119

Query: 578  -HHLSIE------------TDFRNETINYK 594
                S E             D R   +N K
Sbjct: 1120 PSGFSAEKEGSEDTATGVFVDLRPLHLNTK 1149



 Score = 53.6 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 5/102 (4%)

Query: 242 EKRDHRKLAREMDLFHIAE---DGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           E++DHR+L REM LF +      G+    +  +G ++   L S + +  +   ++++ TP
Sbjct: 695 ERKDHRELGREMGLFVLPPASDVGAVGPVFLPEGRQLLANLKSVLAQHQRLLQFQQVETP 754

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVK-CADDTIKDLRTFALKP 338
            +    LW++SGHW  YR NM+ V     D  K+      KP
Sbjct: 755 SLAQSGLWRRSGHWTHYRENMWTVSASPRDEEKEKEESGDKP 796


>gi|320540052|ref|ZP_08039708.1| prolyl-tRNA synthetase [Serratia symbiotica str. Tucson]
 gi|320029901|gb|EFW11924.1| prolyl-tRNA synthetase [Serratia symbiotica str. Tucson]
          Length = 570

 Score =  150 bits (378), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 49/248 (19%), Positives = 97/248 (39%), Gaps = 11/248 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTLKENPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGLRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ + +  E++ P V    LWQ+SG W+ Y   +       D     R F L P +    
Sbjct: 60  EMNNANAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGD-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + + SY++LP+   +  + +R+E      G+MR R F   DA+ F T +      
Sbjct: 115 TDLIRNEISSYKQLPLNFFQIQTKFRDEVRPRF-GIMRSREFLMKDAYSFHTSQDSLQVT 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   G +   V   T       S      A++    ++ +  +     I
Sbjct: 174 YDAMYQAYNKIFSRMGLDFRPVHADTGSIGGSASHEFQVLADSGEDDIVFSTGSDYAANI 233

Query: 464 NTGVLLGE 471
                L  
Sbjct: 234 ELAEALAH 241



 Score = 83.7 bits (205), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 56/168 (33%), Gaps = 13/168 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           I R  + G I Q+         A             ++    +G  + R +   IE N  
Sbjct: 403 IKRGIEVGHIFQLGTKYSEAMKATVQGEDG---RNQVLTMGCYGIGVTRVVAAAIEQNHD 459

Query: 544 GNLPLWL---SPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
               +W    +P Q  +  +           A+++   L+SH + +  D R E       
Sbjct: 460 ERGIIWPDTIAPFQVAILPMNMHKSFRVQALAEDLYTTLRSHGIDVLLDDRKERPGVMFA 519

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  +  +P  I+ GD+      I  +       Q +   + +  L ++
Sbjct: 520 DMELIGVPHTIVIGDRNLDSEEIEYKNRRIGEKQMIKTEEIVNFLLRQ 567


>gi|294631964|ref|ZP_06710524.1| prolyl-tRNA synthetase [Streptomyces sp. e14]
 gi|292835297|gb|EFF93646.1| prolyl-tRNA synthetase [Streptomyces sp. e14]
          Length = 470

 Score =  150 bits (378), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 64/415 (15%), Positives = 152/415 (36%), Gaps = 56/415 (13%)

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLD 301
            R +++L  + +L         ++     G+ +++ +   M  R           P  + 
Sbjct: 15  PRWYQELINKAELADNGPVRGTMVI-RPYGYGLWERMQQEMDARIKDAGAANAYFPLFIP 73

Query: 302 QHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           Q    +++ H + +   +  V        +     ++P +       F+  ++SYR+LP+
Sbjct: 74  QSYLTREAEHVEGFAPELAVVTHGGGKELE-EPIVVRPTSETIVNEYFSKWVQSYRDLPL 132

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
            + ++ +V R E        +R   F   + H                            
Sbjct: 133 LINQWANVVRWEMRP--RVFLRTTEFLWQEGHTAHAT----------------------- 167

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
                + +     R+  D   D    ++   +   + + ++R         GA      E
Sbjct: 168 ----YEDARAYAARIHRDVYHDFMVGVLAIDVVLGRKTVRERF-------AGAINTLTLE 216

Query: 481 YILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
            ++ D  G+  Q GT   +  N    F+  Y++         ++ +  +G+  R +G +I
Sbjct: 217 GMMGD--GKALQMGTSHELGQNFAKAFHTQYLSKDG---RQELVWQTSWGTSTRMVGGLI 271

Query: 540 ENFKGN----LPLWLSPIQAIVTTITSSAVEYAQ--EIANLLKSHHLSIETDFRNETI-N 592
            +   +    +P  L+P+QA+V  +       A+  EI + LK+  + ++ D R +    
Sbjct: 272 MSHGDDSGLRVPPRLAPVQAVVLAVKDDDAVIAKVREIGDRLKAAGVRVQVDDRTDVPFG 331

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRF--GSTTTQKVSLLDA-IPILTKE 644
            +  +  +K +P+ I  G ++    +  + R   G     ++  ++A +P + +E
Sbjct: 332 RRAVDWELKGVPVRIEVGPRDLENGTAMLARRIPGGKAPVRIGEIEALLPKVLEE 386


>gi|156935287|ref|YP_001439203.1| prolyl-tRNA synthetase [Cronobacter sakazakii ATCC BAA-894]
 gi|166980122|sp|A7MI22|SYP_ENTS8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|156533541|gb|ABU78367.1| hypothetical protein ESA_03144 [Cronobacter sakazakii ATCC BAA-894]
          Length = 572

 Score =  150 bits (378), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 48/223 (21%), Positives = 93/223 (41%), Gaps = 11/223 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGLRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E++ P V    LWQ+SG W+ Y   +       D     R F L P +    
Sbjct: 60  EMNNAGAIEVSMPVVQPAELWQESGRWEQYGPELLRFVDRGD-----RAFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   + 
Sbjct: 115 TDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHTTQESLQQT 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
              ++     I+   G +   V+  T       S      A++
Sbjct: 174 YDAMYEAYSKIFTRMGLDFRPVQADTGSIGGSASHEFQVLAQS 216



 Score = 83.3 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 27/176 (15%), Positives = 55/176 (31%), Gaps = 13/176 (7%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
           P  +      I R  + G I Q+         A             ++    +G  + R 
Sbjct: 395 PSPDGQGTLLIKRGIEVGHIFQLGTKYSDALKASVQGEDG---RNQVLTMGCYGIGVTRV 451

Query: 535 IGIMIENFKGN----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDF 586
           +   IE          P  ++P Q  +  +         E A+++   L++  + +  D 
Sbjct: 452 VAAAIEQNHDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYAELRAKGIDVLMDD 511

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           R E       +  +  IP  ++ GD+      I  +       + +   D +  L 
Sbjct: 512 RKERPGVMFADMELIGIPHTVVIGDRNLDNDEIEYKYRRDGEKKMIKTGDILDYLV 567


>gi|300938604|ref|ZP_07153336.1| prolyl-tRNA synthetase [Escherichia coli MS 21-1]
 gi|331645338|ref|ZP_08346449.1| proline--tRNA ligase [Escherichia coli M605]
 gi|281177420|dbj|BAI53750.1| prolyl-tRNA synthetase [Escherichia coli SE15]
 gi|300456450|gb|EFK19943.1| prolyl-tRNA synthetase [Escherichia coli MS 21-1]
 gi|330910045|gb|EGH38555.1| prolyl-tRNA synthetase [Escherichia coli AA86]
 gi|331046095|gb|EGI18214.1| proline--tRNA ligase [Escherichia coli M605]
          Length = 572

 Score =  150 bits (378), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 50/249 (20%), Positives = 98/249 (39%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGVRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E+  P V    LWQ+SG W+ Y   +       +     R F L P +    
Sbjct: 60  EMNNAGAIEVLMPVVQPADLWQESGRWEQYGPELLRFVDRGE-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHTSQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   G +   V+  T       S      A++    V+ +  +     I
Sbjct: 174 YDAMYAAYSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFSDTSDYAANI 233

Query: 464 NTGVLLGEG 472
                +   
Sbjct: 234 ELAEAIAPK 242



 Score = 86.0 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 59/178 (33%), Gaps = 13/178 (7%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
           P  +      I R  + G I Q+         A             ++    +G  + R 
Sbjct: 395 PSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDG---RNQILTMGCYGIGVTRV 451

Query: 535 IGIMIENFKGN----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDF 586
           +   IE          P  ++P Q  +  +         E A+++ + L++  + +  D 
Sbjct: 452 VAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLLDD 511

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R E       +  +  IP  I+ GD+      I  +   +   Q +   D +  L K+
Sbjct: 512 RKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVDYLVKQ 569


>gi|213648168|ref|ZP_03378221.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. J185]
          Length = 306

 Score =  150 bits (378), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 49/248 (19%), Positives = 99/248 (39%), Gaps = 11/248 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGLRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E++ P V    LWQ+SG W+ Y   +       +     R F L P +    
Sbjct: 60  EMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGE-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLVRNELSSYKQLPLNFFQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHTSQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   G +   V+  T       S      A++    ++ +  +     I
Sbjct: 174 YDAMYAAYSRIFSRMGLDFRAVQADTGSIGGNASHEFQVLAQSGEDDIVFSDVSDYAANI 233

Query: 464 NTGVLLGE 471
                +  
Sbjct: 234 ELAEAIAP 241


>gi|41615004|ref|NP_963502.1| prolyl-tRNA synthetase [Nanoarchaeum equitans Kin4-M]
 gi|74580044|sp|Q74ND5|SYP_NANEQ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|40068728|gb|AAR39063.1| NEQ210 [Nanoarchaeum equitans Kin4-M]
          Length = 537

 Score =  150 bits (378), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 82/456 (17%), Positives = 176/456 (38%), Gaps = 44/456 (9%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
              E+ K  + ++ R+ ++   A    G+  +   G+K F+ L+S +  K++    E   
Sbjct: 3   KKSENPKEWYNEIVRKANIIDDAYPVKGMPVYKPYGYKAFKFLMSLLENKLESIGAEPAW 62

Query: 296 TPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
            P V+   +++ +S H   +   +F ++ A +  K      L+P +      +F   ++S
Sbjct: 63  FPIVIPYSIFKKESEHIKGFEEEVFWIERAGND-KLEDPLILRPTSETEMYYMFAKWIES 121

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIIS 413
           YR+LP+ +    +VYR E   S   L+R R    ++ H     E+   E + K   +   
Sbjct: 122 YRDLPLIIYMTNTVYRYETK-STKALIRGREVLWNETHSVHRSEEDAREHMAKAKEVYDY 180

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWD----DAENIMKGVLDTIKNSSQDRINTGVLL 469
           I+ D  +   +       +K  G +  +       +     V        +  I   +  
Sbjct: 181 IFWDVLYLPYIWVRRPEWDKFPGGEETYAADAIMPDGRFLQVGTIHLLGQKFAIPFEIKF 240

Query: 470 GEGAFYGPKF---EYILKDAIGRDWQCGTIQVDFNLPSR---------------FNAFYV 511
            +   +  K+      +KD  G +++    +  +    +               +    +
Sbjct: 241 LDYHPFYKKYGDPNIYIKDKNGNEYKVHAPKEFWEELEKGKLTKTYTIKIGDKEYTISSI 300

Query: 512 NSHSEKCHPV----MIHRAVFGSIERFIG----IMIENFKGNLPLWLSPIQAIVTTI--- 560
              +EK         + +  +G   R  G     + ++    +P  ++PIQ ++  I   
Sbjct: 301 EEINEKLKEYDFRKYVWQTSYGISMRAFGGALYWLGDDLGLVMPYKIAPIQIVIIPILGK 360

Query: 561 -TSSAVEYAQEIANLLKSHHLSIETDFRN-ETINYKIREHSIKKIPIIIICGDKEASERS 618
             +  +EY++++  L+K     +  D  + +T  YK   + +  +P+ I  G KE    S
Sbjct: 361 DDTKVIEYSKKVYELIKDK-YRVYLDSDDTKTPGYKYYYYDLIGVPLRIDIGLKEVENNS 419

Query: 619 IGIRRFGSTTTQKVSLLDA--IPILTKESLPPDCQK 652
           I I R  +     +SL +   I  + KE +  D ++
Sbjct: 420 ITIVRRDNKKKYTISLNELEKIDQIFKE-MEEDLKQ 454


>gi|167553343|ref|ZP_02347092.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA29]
 gi|238911308|ref|ZP_04655145.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Tennessee str. CDC07-0191]
 gi|205322190|gb|EDZ10029.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA29]
          Length = 572

 Score =  150 bits (378), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 49/248 (19%), Positives = 99/248 (39%), Gaps = 11/248 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGLRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E++ P V    LWQ+SG W+ Y   +       +     R F L P +    
Sbjct: 60  EMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGE-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLVRNELSSYKQLPLNFFQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHTSQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   G +   V+  T       S      A++    ++ +  +     I
Sbjct: 174 YDAMYAAYSRIFSRMGLDFRAVQADTGSIGGNASHEFQVLAQSGEDDIVFSDVSDYAANI 233

Query: 464 NTGVLLGE 471
                +  
Sbjct: 234 ELAEAIAP 241



 Score = 84.1 bits (206), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 57/177 (32%), Gaps = 13/177 (7%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
           P  +      I R  + G I Q+         A             ++    +G  + R 
Sbjct: 395 PSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDG---RNQILTMGCYGIGVTRV 451

Query: 535 IGIMIENF----KGNLPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDF 586
           +   IE          P  ++P Q  +  +         E A+++ + L++  + +  D 
Sbjct: 452 VAAAIEQNFDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLMDD 511

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           R E       +  +  IP  I+ GD+      I  +   S     +   D +  L K
Sbjct: 512 RKERPGVMFADMELIGIPHTIVIGDRNLDNDDIEYKYRRSGEKSLIKTGDIVDYLVK 568


>gi|118602380|ref|YP_903595.1| prolyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|152016598|sp|A1AW17|SYP_RUTMC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|118567319|gb|ABL02124.1| prolyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
          Length = 559

 Score =  150 bits (378), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 44/241 (18%), Positives = 94/241 (39%), Gaps = 11/241 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            T+  +        +++   H+ + R      I++  SG+  +   G ++   + + +R+
Sbjct: 3   TTKLLIPTQKEVPNDAQIISHQLMIRAG---LISKLASGLYSYLPMGVRVLHKVENIIRQ 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +E+  P V    LW+ SG WD Y   +        T +  R F L P +    
Sbjct: 60  EMNKSGAQEVFMPVVQPAELWKTSGRWDKYGTELLRF-----TDRHQREFCLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    L+SY++LP+   +  + +R+E      G+MR R F   DA+ F   +    + 
Sbjct: 115 THLAAQYLRSYKQLPMNFYQIQTKFRDEIRPRF-GVMRSREFIMKDAYSFHLDQYSLQQT 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++    +I+     +   V   +       S      AE+    +  + +++    I
Sbjct: 174 YDVMYQTYCNIFDRLSLDYHAVLADSGSIGGDASHEFHVLAESGEDTICFSDESNYAANI 233

Query: 464 N 464
            
Sbjct: 234 E 234



 Score = 71.4 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 28/177 (15%), Positives = 58/177 (32%), Gaps = 13/177 (7%)

Query: 475 YGPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           Y P  +   K  I R  + G I Q+     S      +    +     M    +   + R
Sbjct: 384 YSP--DGKGKLIIKRGIEVGHIFQLGTKYSSAMKVNVIGESGKAITTTMGCYGI--GVTR 439

Query: 534 FIGIMIENFKGN----LPLWLSPIQAIVTTITSSAVEYAQEIANLLKS----HHLSIETD 585
            I   IE    +     P  ++P Q ++  I  +     + +++ L        + +  D
Sbjct: 440 IIAASIEQNYDDKGIIFPQAIAPFQVVIVPINYNKSTRVKALSDKLYQQFIGAGIEVLLD 499

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            R E       +  +  IP  ++  D  A   ++  +        ++   DA+  + 
Sbjct: 500 DRKERAGIMFADSELLGIPHRMVISDTHADNGNVEYKARDKIDKMQMKFDDALSFIQ 556


>gi|161504638|ref|YP_001571750.1| prolyl-tRNA synthetase [Salmonella enterica subsp. arizonae serovar
           62:z4,z23:-- str. RSK2980]
 gi|189083510|sp|A9MPG5|SYP_SALAR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|160865985|gb|ABX22608.1| hypothetical protein SARI_02759 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 572

 Score =  150 bits (378), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 49/248 (19%), Positives = 99/248 (39%), Gaps = 11/248 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGLRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E++ P V    LWQ+SG W+ Y   +       +     R F L P +    
Sbjct: 60  EMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGE-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLVRNELSSYKQLPLNFFQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHTSQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   G +   V+  T       S      A++    ++ +  +     I
Sbjct: 174 YDAMYAAYSRIFSRMGLDFRAVQADTGSIGGNASHEFQVLAQSGEDDIVFSDVSDYAANI 233

Query: 464 NTGVLLGE 471
                +  
Sbjct: 234 ELAEAIAP 241



 Score = 84.1 bits (206), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 57/177 (32%), Gaps = 13/177 (7%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
           P  +      I R  + G I Q+         A             ++    +G  + R 
Sbjct: 395 PSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDG---RNQILTMGCYGIGVTRV 451

Query: 535 IGIMIENF----KGNLPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDF 586
           +   IE          P  ++P Q  +  +         E A+++ + L++  + +  D 
Sbjct: 452 VAAAIEQNFDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLMDD 511

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           R E       +  +  IP  I+ GD+      I  +   S     +   D +  L K
Sbjct: 512 RKERPGVMFADMELIGIPHTIVIGDRNLDNDDIEYKYRRSGEKSLIKTGDIVDYLVK 568


>gi|294508573|ref|YP_003572632.1| Prolyl-tRNA synthetase [Salinibacter ruber M8]
 gi|294344902|emb|CBH25680.1| Prolyl-tRNA synthetase [Salinibacter ruber M8]
          Length = 490

 Score =  150 bits (378), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 59/432 (13%), Positives = 148/432 (34%), Gaps = 69/432 (15%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
            +E   + ++ + R   L   +     +I     G  +++ +   + +  KD  ++    
Sbjct: 8   RDEDYSQWYQDVVRNGQLAENSPARGCMII-KPNGMALWENMRDQLDQMFKDTGHQNYYF 66

Query: 297 PQVLDQHLWQ-QSGHWDSYRANMFAVKC------------ADDTIKDLRTFALKPMNCPG 343
           P  + +   + ++ H + +      V               D   +    + ++P +   
Sbjct: 67  PLFIPERYMEREAEHVEGFAKECAVVTHSRLTQDEEGDLVPDPESELGENYIVRPTSETI 126

Query: 344 HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE 403
               ++  ++SYR+LP+   ++ +V R E    L   +R   F   + H   T      E
Sbjct: 127 IWDTYSKWIQSYRDLPLLYNQWANVVRWEMRPRL--FLRTAEFLWQEGH---TAHATETE 181

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            ++    ++ +Y  F                                  + +        
Sbjct: 182 AVEEAERMLDVYTTF--------------------------------AEEYMAMPVLQGR 209

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVM 522
            T      GA      E +++D  G+  Q GT   +  N    F+  + N  +E+ +   
Sbjct: 210 KTESERFPGAVDTYCIEAMMQD--GKALQAGTSHFLGQNFAKAFDCTFTNEDNEEEY--- 264

Query: 523 IHRAVFGSIERFIGIMIENFKGNL----PLWLSPIQAIVTTITSS------AVEYAQEIA 572
           +    +G   R IG +I     +     P  L+P Q ++  +          +E  + + 
Sbjct: 265 VWATSWGVSTRLIGGLIMTHSDDQGLVLPPKLAPHQVVIVPLFFDDDQEGPVMETCERLQ 324

Query: 573 NLLKSHHLSIETD-FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
             L+ + + ++ D    ++  ++  EH ++ +P+ +  G ++    ++ + R  +   + 
Sbjct: 325 ERLEDYGIRVKMDQNHTQSPGWRFSEHELRGVPLRLAIGPRDLENDNVEMARRDTQEKEV 384

Query: 632 VSLLDAIPILTK 643
           V        ++ 
Sbjct: 385 VPQDGIAERVSD 396


>gi|194443070|ref|YP_002039482.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. SL254]
 gi|197250542|ref|YP_002145247.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Agona str. SL483]
 gi|226701326|sp|B5F8V6|SYP_SALA4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226701335|sp|B4SV24|SYP_SALNS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|194401733|gb|ACF61955.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. SL254]
 gi|197214245|gb|ACH51642.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Agona str. SL483]
          Length = 572

 Score =  150 bits (378), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 49/248 (19%), Positives = 99/248 (39%), Gaps = 11/248 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGLRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E++ P V    LWQ+SG W+ Y   +       +     R F L P +    
Sbjct: 60  EMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGE-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLVRNELSSYKQLPLNFFQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHTSQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   G +   V+  T       S      A++    ++ +  +     I
Sbjct: 174 YDAMYAAYSRIFSRMGLDFRAVQADTGSIGGNASHEFQVLAQSGEDDIVFSDVSDYAANI 233

Query: 464 NTGVLLGE 471
                +  
Sbjct: 234 ELAEAIAP 241



 Score = 84.1 bits (206), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 57/177 (32%), Gaps = 13/177 (7%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
           P  +      I R  + G I Q+         A             ++    +G  + R 
Sbjct: 395 PSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDG---RNQILTMGCYGIGVTRV 451

Query: 535 IGIMIENF----KGNLPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDF 586
           +   IE          P  ++P Q  +  +         E A+++ + L++  + +  D 
Sbjct: 452 VAAAIEQNFDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLMDD 511

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           R E       +  +  IP  I+ GD+      I  +   S     +   D +  L K
Sbjct: 512 RKERPGVMFADMELIGIPHTIVIGDRNLDNDDIEYKYRRSGEKSLIKTGDIVDYLVK 568


>gi|162139614|ref|YP_215228.2| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|114152248|sp|Q57T14|SYP_SALCH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|322713265|gb|EFZ04836.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. A50]
          Length = 572

 Score =  150 bits (378), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 49/248 (19%), Positives = 99/248 (39%), Gaps = 11/248 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGLRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E++ P V    LWQ+SG W+ Y   +       +     R F L P +    
Sbjct: 60  EMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGE-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLVRNELSSYKQLPLNFFQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHTSQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   G +   V+  T       S      A++    ++ +  +     I
Sbjct: 174 YDAMYAAYSRIFSRMGLDFRAVQADTGSIGGNASHEFQVLAQSGEDDIVFSDVSDYAANI 233

Query: 464 NTGVLLGE 471
                +  
Sbjct: 234 ELAEAIAP 241



 Score = 82.9 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 57/177 (32%), Gaps = 13/177 (7%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
           P  +      I R  + G I Q+         A             ++    +G  + R 
Sbjct: 395 PSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDG---RNQILTMGCYGIGVTRV 451

Query: 535 IGIMIENF----KGNLPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDF 586
           +   IE          P  ++P Q  +  +         E A+++ + L++  + +  D 
Sbjct: 452 VAAAIEQNFDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLMDD 511

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           R E       +  +  IP  I+ GD+      I  +   S     +   D +  L K
Sbjct: 512 RKERPGVMFADMELIGIPHTIVIGDRNLDNDDIEYKYRRSGKKSLIKTGDIVDYLVK 568


>gi|332282869|ref|ZP_08395282.1| prolyl-tRNA synthetase [Shigella sp. D9]
 gi|332105221|gb|EGJ08567.1| prolyl-tRNA synthetase [Shigella sp. D9]
          Length = 590

 Score =  150 bits (378), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 50/249 (20%), Positives = 99/249 (39%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 21  TSQYLLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGVRVLKKVENIVRE 77

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E++ P V    LWQ+SG W+ Y   +       +     R F L P +    
Sbjct: 78  EMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGE-----RPFVLGPTHEEVI 132

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 133 TDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHTSQESLQET 191

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   G +   V+  T       S      A++    V+ +  +     I
Sbjct: 192 YDAMYAAYSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFSDTSDYAANI 251

Query: 464 NTGVLLGEG 472
                +   
Sbjct: 252 ELAEAIAPK 260



 Score = 86.8 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 59/178 (33%), Gaps = 13/178 (7%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
           P  +      I R  + G I Q+         A             ++    +G  + R 
Sbjct: 413 PSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDG---RNQILTMGCYGIGVTRV 469

Query: 535 IGIMIENFKGN----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDF 586
           +   IE          P  ++P Q  +  +         E A+++ + L++  + +  D 
Sbjct: 470 VAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLLDD 529

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R E       +  +  IP  I+ GD+      I  +   +   Q +   D +  L K+
Sbjct: 530 RKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVEYLVKQ 587


>gi|218698853|ref|YP_002406482.1| prolyl-tRNA synthetase [Escherichia coli IAI39]
 gi|226701079|sp|B7NKX8|SYP_ECO7I RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|218368839|emb|CAR16587.1| prolyl-tRNA synthetase [Escherichia coli IAI39]
          Length = 572

 Score =  150 bits (378), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 50/249 (20%), Positives = 98/249 (39%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGVRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E+  P V    LWQ+SG W+ Y   +       +     R F L P +    
Sbjct: 60  EMNNAGAIEVLMPVVQPADLWQESGRWEQYGPELLRFVDRGE-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHTSQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   G +   V+  T       S      A++    V+ +  +     I
Sbjct: 174 YDAMYAAYSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFSDTSDYAANI 233

Query: 464 NTGVLLGEG 472
                +   
Sbjct: 234 ELAEAIAPK 242



 Score = 86.0 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 59/178 (33%), Gaps = 13/178 (7%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
           P  +      I R  + G I Q+         A             ++    +G  + R 
Sbjct: 395 PSPDGQGTLQIKRGIEVGHIFQLGTKYSEALKASVQGEDG---RNQILTMGCYGIGVTRV 451

Query: 535 IGIMIENFKGN----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDF 586
           +   IE          P  ++P Q  +  +         E A+++ + L++  + +  D 
Sbjct: 452 VAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLLDD 511

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R E       +  +  IP  I+ GD+      I  +   +   Q +   D +  L K+
Sbjct: 512 RKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVDYLVKQ 569


>gi|300864298|ref|ZP_07109176.1| Prolyl-tRNA synthetase [Oscillatoria sp. PCC 6506]
 gi|300337687|emb|CBN54322.1| Prolyl-tRNA synthetase [Oscillatoria sp. PCC 6506]
          Length = 601

 Score =  149 bits (377), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 57/249 (22%), Positives = 96/249 (38%), Gaps = 8/249 (3%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q           E+E   H+ L R   +  I   GSGV  +    W++ + +   +R +
Sbjct: 4   SQMLFATLREEPAEAEIPSHKLLLRAGYIRRI---GSGVYVYLPLLWRVLKKVSQIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E   PQ+    LW++SG WD+Y      +     T +  R   L P +     
Sbjct: 61  MDATGAQECLLPQLQPAELWRESGRWDTYTKAEGIMFAL--TDRQNRELGLGPTHEEVIT 118

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    ++SYR+LP+ L +  + +R+E      GLMR R F   D + F   E+   +  
Sbjct: 119 TIAKDMIRSYRQLPLHLYQIQTKFRDEIRPRF-GLMRGREFIMKDGYSFHKDEESLKKTY 177

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
           + +     ++ +  G E   V   +      GS      AE     VL T        + 
Sbjct: 178 QDMAQAYSNMLRRCGLEFRGVDADSGAIGGSGSQEFMVLAEAGEDEVLYTEDGQYAANVE 237

Query: 465 TGVLLGEGA 473
             V L   A
Sbjct: 238 KAVSLPADA 246



 Score = 80.2 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 63/162 (38%), Gaps = 9/162 (5%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I Q+         A Y N   E+  P+++     G        + +++  +  
Sbjct: 435 RGIEVGHIFQLGTKYSQAMGATYTNEQGEEI-PLVMGCYGLGVSRLAQSAVEQSYDKDGI 493

Query: 548 LWL---SPIQAIV-TTITSS--AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W    +P Q I+     S    +E A+++   L    +    D R+E    K ++  + 
Sbjct: 494 IWPVAIAPYQVIISIPNISDAQQIEVAEKLYTELNQAGVETLLDDRDERAGVKFKDADLI 553

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            IP  I+ G +   +  + +    +  + ++++ D    L +
Sbjct: 554 GIPYRIVTG-RSLKQGKVEVVERAAHKSHEIAIDDVKSTLMQ 594


>gi|216264165|ref|ZP_03436157.1| prolyl-tRNA synthetase [Borrelia burgdorferi 156a]
 gi|215980638|gb|EEC21445.1| prolyl-tRNA synthetase [Borrelia burgdorferi 156a]
          Length = 488

 Score =  149 bits (377), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 75/431 (17%), Positives = 155/431 (35%), Gaps = 61/431 (14%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
           ++ ++   E+   + +  + ++  L   +     ++     G+ I+  + S + +K K+ 
Sbjct: 1   MSDFIASKEDDYSKWYLDIVQKAKLADYSPVKGCMVI-MPYGYSIWSKIQSILDKKFKET 59

Query: 290 DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
            +E    P ++     + +  H D +      +K A           L+P +      ++
Sbjct: 60  GHENAYFPMLIPYSFLEREKDHIDGFSPEFAIIKDAGGESL-AEPLVLRPTSETIIWNMY 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
           +  +KSYR+LP+++ ++ +V R E        +R   F   + H   T      E L+  
Sbjct: 119 SKWIKSYRDLPLKINQWANVVRWEKR--TRPFLRTTEFLWQEGH---TAHATEEEALEET 173

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
            LI+ +YK F                          E+ +   +   K S +++      
Sbjct: 174 LLILDVYKRF-------------------------IEDYLAIPVFCGKKSEKEKF----- 203

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAV 527
              GA      E +++D   +  Q  T      N    F+  + +   +  H   +  + 
Sbjct: 204 --AGAVSTYSIEALMQD--KKALQAATSHYLGLNFAKAFDVKFQDKDGKMRH---VFASS 256

Query: 528 FGSIERFIGIMIENFKGNLPLWL----SPIQAIVTT-------ITSSAVEYAQEIANLLK 576
           +G   R IG +I        L L    +PI+ IV         I    ++Y+  + + LK
Sbjct: 257 WGVSTRLIGALIMGHSDEKGLVLPPRIAPIEIIVIPIFKKEDEINKKILDYSDCVVDALK 316

Query: 577 SHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT--TQKVS 633
                +E D     +  ++      K IPI +  G  +    S+ I R         ++S
Sbjct: 317 KAEFRVEIDKDVRSSPGFRFSSAEFKGIPIRLEVGINDVLLNSVTISRRDKDRKFKYQIS 376

Query: 634 LLDAIPILTKE 644
           L   +  +  E
Sbjct: 377 LDSLVSKVKVE 387


>gi|304413226|ref|ZP_07394699.1| Prolyl-tRNA synthetase [Candidatus Regiella insecticola LSR1]
 gi|304284069|gb|EFL92462.1| Prolyl-tRNA synthetase [Candidatus Regiella insecticola LSR1]
          Length = 597

 Score =  149 bits (377), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 50/217 (23%), Positives = 91/217 (41%), Gaps = 11/217 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L        ++E   H+ + R      I +  SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLATQKEIPADAESISHKLMLRAGM---IQQVTSGLYTWLPTGLRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E++ P V    LWQ+SG WD Y   +          +  R F L P +    
Sbjct: 60  EMNNAGAIEVSMPMVQPADLWQESGRWDKYGLELLRFVD-----RHERHFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
            A+  + +KSY++LP+ L +  + +R+E      G+MR R F   DA+ F T ++   + 
Sbjct: 115 TALVRNQIKSYKQLPLNLFQIQTKFRDEVRPRF-GVMRAREFLMKDAYSFHTTQESLQKT 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
              +H     I+   G +   V+  T       S   
Sbjct: 174 YDTMHATYSKIFSRIGLDFRAVQADTGSIGGSRSHEF 210



 Score = 76.4 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 54/170 (31%), Gaps = 11/170 (6%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           + R  + G I Q+        NA   N    K   + +     G   R +   IE     
Sbjct: 410 LKRGIEVGHIFQLGTQYSKIMNATIENKEG-KKQAITMGCYGIGVS-RIVAAAIEQNYDE 467

Query: 546 ----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
                P  ++P Q  +  +         E A+ +   L  H + +  D R E       +
Sbjct: 468 DGILWPEAIAPFQVAILPMNMHKSFRVQEQAEALYKALSDHGVEVILDDRCERPGVMFTD 527

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLP 647
             +  +P  I+  ++    + +  +   S  TQ +     I  L  +   
Sbjct: 528 MELIGVPNSIVISERNHDNQEVEYKNRRSGETQMIKSDKIIDFLIAQITK 577


>gi|168235024|ref|ZP_02660082.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|194735941|ref|YP_002113265.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|204926680|ref|ZP_03217882.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Javiana str. GA_MM04042433]
 gi|226701337|sp|B4TYF5|SYP_SALSV RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|194711443|gb|ACF90664.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|197291887|gb|EDY31237.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|204323345|gb|EDZ08540.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Javiana str. GA_MM04042433]
          Length = 572

 Score =  149 bits (377), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 49/248 (19%), Positives = 99/248 (39%), Gaps = 11/248 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGLRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E++ P V    LWQ+SG W+ Y   +       +     R F L P +    
Sbjct: 60  EMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGE-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLVRNELSSYKQLPLNFFQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHTSQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   G +   V+  T       S      A++    ++ +  +     I
Sbjct: 174 YDAMYAAYSRIFSRMGLDFRAVQADTGSIGGNASHEFQVLAQSGEDDIVFSDVSDYAANI 233

Query: 464 NTGVLLGE 471
                +  
Sbjct: 234 ELAEAIAP 241



 Score = 83.7 bits (205), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 57/177 (32%), Gaps = 13/177 (7%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
           P  +      I R  + G I Q+         A             ++    +G  + R 
Sbjct: 395 PSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDG---RNQILTMGCYGIGVTRV 451

Query: 535 IGIMIENF----KGNLPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDF 586
           +   IE          P  ++P Q  +  +         E A+++ + L++  + +  D 
Sbjct: 452 VAAAIEQNFDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLMDD 511

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           R E       +  +  IP  I+ GD+      I  +   S     +   D +  L K
Sbjct: 512 RKERPGVMFADMELIGIPHTIVIGDRNLDNDDIEYKYRRSGEKSLIKTGDIVDYLVK 568


>gi|254037614|ref|ZP_04871691.1| prolyl-tRNA synthetase [Escherichia sp. 1_1_43]
 gi|226840720|gb|EEH72722.1| prolyl-tRNA synthetase [Escherichia sp. 1_1_43]
          Length = 590

 Score =  149 bits (377), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 50/249 (20%), Positives = 99/249 (39%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 21  TSQYLLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGVRVLKKVENIVRE 77

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E++ P V    LWQ+SG W+ Y   +       +     R F L P +    
Sbjct: 78  EMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGE-----RPFVLGPTHEEVI 132

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 133 TDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHTSQESLQET 191

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   G +   V+  T       S      A++    V+ +  +     I
Sbjct: 192 YDAMYAAYSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFSDTSDYAANI 251

Query: 464 NTGVLLGEG 472
                +   
Sbjct: 252 ELAEAIAPK 260



 Score = 86.8 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 59/178 (33%), Gaps = 13/178 (7%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
           P  +      I R  + G I Q+         A             ++    +G  + R 
Sbjct: 413 PSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDG---RNQILTMGCYGIGVTRV 469

Query: 535 IGIMIENFKGN----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDF 586
           +   IE          P  ++P Q  +  +         E A+++ + L++  + +  D 
Sbjct: 470 VAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLLDD 529

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R E       +  +  IP  I+ GD+      I  +   +   Q +   D +  L K+
Sbjct: 530 RKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVEYLVKQ 587


>gi|188533062|ref|YP_001906859.1| prolyl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
 gi|226701287|sp|B2VDZ9|SYP_ERWT9 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|188028104|emb|CAO95961.1| Prolyl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
          Length = 572

 Score =  149 bits (377), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 53/249 (21%), Positives = 99/249 (39%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            TQ  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TTQYLLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGLRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    EI+ P V    LWQ+SG W+ Y   +  +    D     R F L P +    
Sbjct: 60  EMNNAGAIEISMPVVQPADLWQESGRWEQYGPELLRLVDRSD-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+ L +  + +R+E      G+MR R F   DA+ F T +    E 
Sbjct: 115 TDLIRNELSSYKQLPLNLFQIQTKFRDEVRPRF-GVMRSREFIMKDAYSFHTSQGSLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++      +   G +   V+  T       S      A++    ++ +  +     I
Sbjct: 174 YDAMYRAYSQSFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDIVFSTGSDYAANI 233

Query: 464 NTGVLLGEG 472
                L   
Sbjct: 234 EMAEALPPA 242



 Score = 87.9 bits (216), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 28/167 (16%), Positives = 53/167 (31%), Gaps = 11/167 (6%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKG 544
           I R  + G I Q+         A             M    +   I R +   IE N   
Sbjct: 405 IKRGIEVGHIFQLGTKYSEAMKASVQGEDGRNQTLTMGCYGI--GITRIVAAAIEQNHDE 462

Query: 545 NLPLW---LSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
              +W   L+P Q  +  +         E A+ +   L++  + +  D R E       +
Sbjct: 463 RGIIWSPALAPFQVAILPMNMQKSFRVKELAEALYQQLRAKGIDVILDDRKERPGVMFAD 522

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
             +  +P  I+ G++      I  +       + +   + +  L  E
Sbjct: 523 MELIGVPHTIVIGERNLDNDEIEYKARRGGEKRLIKTDEIVDFLMAE 569


>gi|313678253|ref|YP_004055993.1| proline--tRNA ligase [Mycoplasma bovis PG45]
 gi|312950316|gb|ADR24911.1| proline--tRNA ligase [Mycoplasma bovis PG45]
          Length = 478

 Score =  149 bits (377), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 65/417 (15%), Positives = 150/417 (35%), Gaps = 56/417 (13%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
           LE    R +  + ++ +L         +  +    + I++ +   +         + +  
Sbjct: 10  LELDFARWYTDVVKQGNLIEYGPVKGTM-IFKPNSFGIWEQIQKALNGIFNSLKIQNVYL 68

Query: 297 PQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P  +   L  ++  H   +   +  +    D   + + + ++P +      +F   + S+
Sbjct: 69  PLFIPDRLLAKEKEHIAGFNPELATITKVGDKDLEQKIY-VRPTSEVLFADLFKKMIVSH 127

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           ++LP+   ++ +V R E   + +  +R R F   + H   T  +   E  K+   +I++Y
Sbjct: 128 KDLPILYNQWANVVRWEK--TTNPFLRNREFLWQEGH---TCHKSAIEARKLTRDMINVY 182

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
             F                             +K  L  I      +       G  + Y
Sbjct: 183 AKF-----------------------------LKNYL-AIPTIIGKKTPYEKFAGACSTY 212

Query: 476 GPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
               E ++KD  G+  Q GT      N   +F   + N  +E      +++  +G   R 
Sbjct: 213 T--VEAMMKD--GKALQAGTSHYLAQNFSKKFEISFKNDKNEDE---FVYQTSWGVSTRL 265

Query: 535 IGIMIENFKGN----LPLWLSPIQAIVTTIT----SSAVEYAQEIANLLKSHHLSIETDF 586
           +G +I     N    +P  ++P+Q  +  +         ++ QE+   L+     +  D 
Sbjct: 266 LGAIIMTHGDNRGIIIPPKVAPVQVDILELFANKQPRVHDFCQELVKQLERK-FRVRLDS 324

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +++  YK     I+ +P+ I  G K+   +++ I R  +     V + +    + +
Sbjct: 325 TDKSPGYKASNSEIQGVPLRIEVGPKDLENKTVTIVRRDTLEKTIVDISEVKSKVRE 381


>gi|168823087|ref|ZP_02835087.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Weltevreden str. HI_N05-537]
 gi|205340609|gb|EDZ27373.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Weltevreden str. HI_N05-537]
          Length = 572

 Score =  149 bits (377), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 49/248 (19%), Positives = 99/248 (39%), Gaps = 11/248 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGLRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E++ P V    LWQ+SG W+ Y   +       +     R F L P +    
Sbjct: 60  EMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGE-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLVRNELSSYKQLPLNFFQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHTSQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   G +   V+  T       S      A++    ++ +  +     I
Sbjct: 174 YDAMYAAYSRIFSRMGLDFRAVQADTGSIGGNASHEFQVLAQSGEDDIVFSDVSDYAANI 233

Query: 464 NTGVLLGE 471
                +  
Sbjct: 234 ELAEAIAP 241



 Score = 83.7 bits (205), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 57/177 (32%), Gaps = 13/177 (7%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
           P  +      I R  + G I Q+         A             ++    +G  + R 
Sbjct: 395 PSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDG---RNQILTMGCYGIGVTRV 451

Query: 535 IGIMIENF----KGNLPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDF 586
           +   IE          P  ++P Q  +  +         E A+++ + L++  + +  D 
Sbjct: 452 VAAAIEQNFDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLMDD 511

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           R E       +  +  IP  I+ GD+      I  +   S     +   D +  L K
Sbjct: 512 RKERPGVMFADMELIGIPHTIVIGDRNLDNDDIEYKYRRSGEKSLIKTGDIVDYLVK 568


>gi|255320540|ref|ZP_05361720.1| prolyl-tRNA synthetase [Acinetobacter radioresistens SK82]
 gi|262379097|ref|ZP_06072253.1| prolyl-tRNA synthetase [Acinetobacter radioresistens SH164]
 gi|255302390|gb|EET81627.1| prolyl-tRNA synthetase [Acinetobacter radioresistens SK82]
 gi|262298554|gb|EEY86467.1| prolyl-tRNA synthetase [Acinetobacter radioresistens SH164]
          Length = 571

 Score =  149 bits (377), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 65/371 (17%), Positives = 124/371 (33%), Gaps = 31/371 (8%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++           ++E   H+ + R   +  +A   SG+  W   G ++   + + +R 
Sbjct: 3   ASRFLFATLRETPNDAEVISHQLMLRAGMIRKLA---SGLYTWLPMGVRVLNKVEAIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E   P      LW++SG +  Y   +          +    F L P +    
Sbjct: 60  EMNRAGALETFMPVTQPASLWEESGRYVQYGPELLRFND-----RHTNPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + LKSY++LP+   +  + +R+E      G+MR R F   DA+ F   +    E 
Sbjct: 115 TDLARNELKSYKQLPINFYQIQTKFRDEVRPRF-GVMRSREFIMKDAYSFHVDQASLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   G +   V+  T      GS      A +    +  + ++     I
Sbjct: 174 YDVMYETYCRIFSRLGLDFRPVQADTGSIGGSGSHEFHVLASSGEDDIAFSTESDYAANI 233

Query: 464 N--TGVLLGEGAFYGPKFEYILKDAIGRDWQCGT-IQVDFNLPSRFNAFYVNSHSEKCHP 520
                +L+GE A      E +            T +  D     +       +  +   P
Sbjct: 234 EMAEAILVGERAAPTQALEIVDTPNQKTIADVSTFLNTDPAHSVKALLVQGIADEKGHSP 293

Query: 521 VMIHRAVFGSIERFIGIMIENFKGNLPLWLSP------IQAIVTTITSSAVEYAQEIANL 574
           V I   + G  E     + E      PL  +P       Q     +T+  +         
Sbjct: 294 V-IALFLRGDHE-----LNEIKAEKHPLIAAPLTFATEEQIAALGLTAGFIGP-----QG 342

Query: 575 LKSHHLSIETD 585
           L    L++  D
Sbjct: 343 LVEKGLTVIVD 353



 Score = 86.8 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 28/167 (16%), Positives = 59/167 (35%), Gaps = 13/167 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           I R  + G I Q+            +    +   P+ +    +G  + R I   IE    
Sbjct: 408 IKRGIEVGHIFQLGKKYSEALGCKVLGEDGK---PLTVTMGCYGIGVTRVIASAIEQNYD 464

Query: 545 N----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                 P  ++P +  +  +    +   +E A+ +   L++    +  D RNE    K  
Sbjct: 465 EKGIIWPAAIAPFEVAIVPMNAHKSPRTLEAAEALYIELQAQGFDVLLDDRNERPGVKFS 524

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  +  IP  I+ G+K     +   +      +  ++  + +  L K
Sbjct: 525 DLELTGIPHRIVIGEKGLDAGTFEYKGRTDIESVNINKDELLAKLAK 571


>gi|320084496|emb|CBY94289.1| Prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Weltevreden str. 2007-60-3289-1]
          Length = 572

 Score =  149 bits (377), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 49/248 (19%), Positives = 99/248 (39%), Gaps = 11/248 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGLRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E++ P V    LWQ+SG W+ Y   +       +     R F L P +    
Sbjct: 60  EMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGE-----RPFILGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLVRNELSSYKQLPLNFFQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHTSQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   G +   V+  T       S      A++    ++ +  +     I
Sbjct: 174 YDAMYAAYSRIFSRMGLDFRAVQADTGSIGGNASHEFQVLAQSGEDDIVFSDVSDYAANI 233

Query: 464 NTGVLLGE 471
                +  
Sbjct: 234 ELAEAIAP 241



 Score = 83.7 bits (205), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 57/177 (32%), Gaps = 13/177 (7%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
           P  +      I R  + G I Q+         A             ++    +G  + R 
Sbjct: 395 PSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDG---RNQILTMGCYGIGVTRV 451

Query: 535 IGIMIENF----KGNLPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDF 586
           +   IE          P  ++P Q  +  +         E A+++ + L++  + +  D 
Sbjct: 452 VAAAIEQNFDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLMDD 511

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           R E       +  +  IP  I+ GD+      I  +   S     +   D +  L K
Sbjct: 512 RKERPGVMFADMELIGIPHTIVIGDRNLDNDDIEYKYRRSGEKSLIKTGDIVDYLVK 568


>gi|261245474|emb|CBG23264.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. D23580]
          Length = 572

 Score =  149 bits (377), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 48/248 (19%), Positives = 99/248 (39%), Gaps = 11/248 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLVSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGLRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E++ P V    LWQ+SG W+ Y   +       +     R F L P +    
Sbjct: 60  EMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGE-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLVRNELSSYKQLPLNFFQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHTSQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   G +   V+  T       S      A++    ++ +  +     I
Sbjct: 174 YDAMYAAYSRIFSRMGLDFRAVQADTGSIGGNASHEFQVLAQSGEDDIVFSDVSDYAANI 233

Query: 464 NTGVLLGE 471
                +  
Sbjct: 234 ELAEAIAP 241



 Score = 83.7 bits (205), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 57/177 (32%), Gaps = 13/177 (7%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
           P  +      I R  + G I Q+         A             ++    +G  + R 
Sbjct: 395 PSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDG---RNQILTMGCYGIGVTRV 451

Query: 535 IGIMIENF----KGNLPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDF 586
           +   IE          P  ++P Q  +  +         E A+++ + L++  + +  D 
Sbjct: 452 VAAAIEQNFDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLMDD 511

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           R E       +  +  IP  I+ GD+      I  +   S     +   D +  L K
Sbjct: 512 RKERPGVMFADMELIGIPHTIVIGDRNLDNDDIEYKYRRSGEKSLIKTGDIVDYLVK 568


>gi|16759234|ref|NP_454851.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. CT18]
 gi|16763631|ref|NP_459246.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|29140783|ref|NP_804125.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. Ty2]
 gi|56412515|ref|YP_149590.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. ATCC 9150]
 gi|161612617|ref|YP_001586582.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi B str. SPB7]
 gi|167990131|ref|ZP_02571231.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|168230553|ref|ZP_02655611.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Kentucky str. CDC 191]
 gi|168245012|ref|ZP_02669944.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL486]
 gi|168264654|ref|ZP_02686627.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Hadar str. RI_05P066]
 gi|168464192|ref|ZP_02698095.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. SL317]
 gi|194449602|ref|YP_002044232.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|194472823|ref|ZP_03078807.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Kentucky str. CVM29188]
 gi|197264294|ref|ZP_03164368.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA23]
 gi|197361450|ref|YP_002141086.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. AKU_12601]
 gi|198242516|ref|YP_002214203.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Dublin str. CT_02021853]
 gi|200386929|ref|ZP_03213541.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Virchow str. SL491]
 gi|205351579|ref|YP_002225380.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 287/91]
 gi|207855760|ref|YP_002242411.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. P125109]
 gi|213051828|ref|ZP_03344706.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E00-7866]
 gi|213428490|ref|ZP_03361240.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E02-1180]
 gi|213580835|ref|ZP_03362661.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E98-0664]
 gi|213865222|ref|ZP_03387341.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. M223]
 gi|81821351|sp|Q5PD80|SYP_SALPA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|81832731|sp|Q7CR62|SYP_SALTY RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|81849080|sp|Q8XEY9|SYP_SALTI RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|189083511|sp|A9N0U7|SYP_SALPB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226701327|sp|B5FJ42|SYP_SALDC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226701328|sp|B5R434|SYP_SALEP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226701329|sp|B5R5J8|SYP_SALG2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226701334|sp|B4TK70|SYP_SALHS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226701336|sp|B5BAQ2|SYP_SALPK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|25293215|pir||AF0532 prolyl-tRNA synthetase [imported] - Salmonella enterica subsp.
           enterica serovar Typhi (strain CT18)
 gi|16418747|gb|AAL19205.1| proline tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|16501525|emb|CAD08702.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi]
 gi|29136407|gb|AAO67974.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. Ty2]
 gi|56126772|gb|AAV76278.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. ATCC 9150]
 gi|161361981|gb|ABX65749.1| hypothetical protein SPAB_00308 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194407906|gb|ACF68125.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|194459187|gb|EDX48026.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Kentucky str. CVM29188]
 gi|195632930|gb|EDX51384.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. SL317]
 gi|197092926|emb|CAR58355.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. AKU_12601]
 gi|197242549|gb|EDY25169.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA23]
 gi|197937032|gb|ACH74365.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Dublin str. CT_02021853]
 gi|199604027|gb|EDZ02572.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Virchow str. SL491]
 gi|205271360|emb|CAR36153.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 287/91]
 gi|205331403|gb|EDZ18167.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|205335202|gb|EDZ21966.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Kentucky str. CDC 191]
 gi|205336220|gb|EDZ22984.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL486]
 gi|205346928|gb|EDZ33559.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Hadar str. RI_05P066]
 gi|206707563|emb|CAR31837.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. P125109]
 gi|267991932|gb|ACY86817.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. 14028S]
 gi|301156869|emb|CBW16345.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. SL1344]
 gi|312911213|dbj|BAJ35187.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. T000240]
 gi|321225175|gb|EFX50235.1| Prolyl-tRNA synthetase ; Bacterial type [Salmonella enterica subsp.
           enterica serovar Typhimurium str. TN061786]
 gi|323128562|gb|ADX15992.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. 4/74]
 gi|326621946|gb|EGE28291.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Dublin str. 3246]
 gi|326626606|gb|EGE32949.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 9]
 gi|332987194|gb|AEF06177.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. UK-1]
          Length = 572

 Score =  149 bits (377), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 49/248 (19%), Positives = 99/248 (39%), Gaps = 11/248 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGLRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E++ P V    LWQ+SG W+ Y   +       +     R F L P +    
Sbjct: 60  EMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGE-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLVRNELSSYKQLPLNFFQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHTSQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   G +   V+  T       S      A++    ++ +  +     I
Sbjct: 174 YDAMYAAYSRIFSRMGLDFRAVQADTGSIGGNASHEFQVLAQSGEDDIVFSDVSDYAANI 233

Query: 464 NTGVLLGE 471
                +  
Sbjct: 234 ELAEAIAP 241



 Score = 83.7 bits (205), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 57/177 (32%), Gaps = 13/177 (7%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
           P  +      I R  + G I Q+         A             ++    +G  + R 
Sbjct: 395 PSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDG---RNQILTMGCYGIGVTRV 451

Query: 535 IGIMIENF----KGNLPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDF 586
           +   IE          P  ++P Q  +  +         E A+++ + L++  + +  D 
Sbjct: 452 VAAAIEQNFDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLMDD 511

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           R E       +  +  IP  I+ GD+      I  +   S     +   D +  L K
Sbjct: 512 RKERPGVMFADMELIGIPHTIVIGDRNLDNDDIEYKYRRSGEKSLIKTGDIVDYLVK 568


>gi|328876572|gb|EGG24935.1| prolyl-tRNA synthetase [Dictyostelium fasciculatum]
          Length = 615

 Score =  149 bits (377), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 76/436 (17%), Positives = 154/436 (35%), Gaps = 60/436 (13%)

Query: 228 QQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI 287
           + +L       EE     +  +    ++     D SG        + I++ +  +   +I
Sbjct: 99  KDKLNGAGVAKEEDFSEWYTNVITRAEMVDY-YDVSGCYILRPWSYSIWEQIQGFFDGEI 157

Query: 288 KD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           K    +    P  + +     +  H + +   +  V  +  +       A++P +     
Sbjct: 158 KKLGVQNAYFPLFVSEKALATEEDHIEGFAPEVAWVTKSGQSEL-SEPIAIRPTSETIMY 216

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNEC 404
             + + ++S+R+LP++L ++ +V R E    +   +R R F   + H  + TKE+   E 
Sbjct: 217 PAYANWIRSHRDLPLKLNQWVNVVRWEFKRPV-PFLRSREFLWQEGHTVYATKEEADKEV 275

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
             I  L   +Y+D                                     +     + I 
Sbjct: 276 FNILRLYKRVYEDL------------------------------------LAVPVVEGIK 299

Query: 465 TGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMI 523
           +      G  Y    E  +  + GR  Q  T   +  N    FN  + N+  +K    + 
Sbjct: 300 SEKEKFAGGLYTSTIEGFIP-SNGRAIQAATSHALGQNFSKMFNIEFENTDGKK---ALA 355

Query: 524 HRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTT------ITSSAVEYAQEIAN 573
            +  +G   R IG+M+    ++    LP  ++PIQ ++         +      A E+  
Sbjct: 356 WQNSWGLTTRSIGVMVMVHGDDNGLVLPPRIAPIQVVILPFYFKDTSSEEIDNKAAEVLA 415

Query: 574 LLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS-TTTQK 631
           LL++  +  + D R   +   K     +K +PI I  G K+   + +   R        K
Sbjct: 416 LLQAAGIRAQVDNRTGYSPRDKHVHWELKGVPIRIEIGPKDLVNKVVVFCRRDVPGKEGK 475

Query: 632 VSL-LDAIPILTKESL 646
            S+  + + + TK  L
Sbjct: 476 FSVPEEGLALKTKAVL 491


>gi|224582089|ref|YP_002635887.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi C strain RKS4594]
 gi|254782914|sp|C0Q6L7|SYP_SALPC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|224466616|gb|ACN44446.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi C strain RKS4594]
          Length = 572

 Score =  149 bits (377), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 49/248 (19%), Positives = 99/248 (39%), Gaps = 11/248 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGLRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E++ P V    LWQ+SG W+ Y   +       +     R F L P +    
Sbjct: 60  EMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGE-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLVRNELSSYKQLPLNFFQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHTSQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   G +   V+  T       S      A++    ++ +  +     I
Sbjct: 174 YDAMYAAYSRIFSRMGLDFRAVQADTGSIGGNASHEFQVLAQSGEDDIVFSDVSDYAANI 233

Query: 464 NTGVLLGE 471
                +  
Sbjct: 234 ELAEAIAP 241



 Score = 82.9 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 55/167 (32%), Gaps = 13/167 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENF-- 542
           I R  + G I Q+         A             ++    +G  + R +   IE    
Sbjct: 405 IKRGIEVGHIFQLGTKYSEALKASVQGEDG---RNQILTMGCYGIGVTRVVAAAIEQNFD 461

Query: 543 --KGNLPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                 P  ++P Q  +  +         E A+++ + L++  + +  D R E       
Sbjct: 462 ERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLMDDRKERPGVMFA 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  +  IP  I+ GD+      I  +   S     +   D +  L K
Sbjct: 522 DMELIGIPHTIVIGDRNLDNDDIEYKYRRSGKKSLIKTGDIVDYLVK 568


>gi|221502959|gb|EEE28669.1| threonyl-tRNA synthetase, putative [Toxoplasma gondii VEG]
          Length = 377

 Score =  149 bits (377), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 86/270 (31%), Positives = 126/270 (46%), Gaps = 55/270 (20%)

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           R LP+R++EFG V+R E   +L GL R+R FTQDD H+ CT+EQ   E       I+ +Y
Sbjct: 130 RHLPLRISEFGRVFRRERRSALCGLFRLREFTQDDGHILCTREQAVEEIKVQLASILHLY 189

Query: 416 -KDFGFEK---------IMVKLSTRPEKRVGSDA--LWDDAENIMKGVLDTIKNSSQDRI 463
            + FG               K S R +    S+   LW  AE  +   L+  +    +  
Sbjct: 190 VQVFGISPEGVKVSLGSRPAKASRRSDASADSEDEKLWTQAEAWL---LEAAREVLPNAS 246

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
           +     G GAFYGPK ++ L D  GR WQ GT+Q                       V+I
Sbjct: 247 SVETEEGGGAFYGPKLDFSLSDVQGRWWQTGTLQPL---------------------VLI 285

Query: 524 HRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITS---SAVEYAQEIANLLKS--- 577
           HRA  GS+ERF+ +++E   G+LP+WL+P++A+V  ++       EYA+ +A +L+    
Sbjct: 286 HRAAVGSLERFLALLLELRNGDLPVWLAPVKAVVCPVSVQSREIREYAERVATVLRESVA 345

Query: 578 -HHLSIE------------TDFRNETINYK 594
               S E             D R   +N K
Sbjct: 346 PSGFSAEKEGSEDTATGVFVDLRPLHLNSK 375


>gi|213405351|ref|XP_002173447.1| prolyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
 gi|212001494|gb|EEB07154.1| prolyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
          Length = 418

 Score =  149 bits (377), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 70/429 (16%), Positives = 146/429 (34%), Gaps = 41/429 (9%)

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYM 283
              +Q  L +        +      +    D  ++ +  SGV      G ++   + + +
Sbjct: 7   NRASQLLLKESGKNYVVPKNVSSLLI----DQGYVQQSSSGVFQLLPLGLRVMDNISNIV 62

Query: 284 RRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
            +++       ++   +  + +WQQS  W+   + M  ++      +  R + L P +  
Sbjct: 63  HQELAGLGAIRVSLASLSAKAVWQQSKRWEKMGSEMLHIRD-----RAQRDYCLCPTHEE 117

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMF 401
               +  +   S ++LP+ + + GS YR+E      GL+R + F   D + +  TKE   
Sbjct: 118 EMTRMVANVFHSSKQLPISVYQIGSKYRDEARPR-GGLLRAKEFLMMDLYTYDATKEAAE 176

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
               ++      I++  G    + +          S       E     VL   +     
Sbjct: 177 KTYERVFQSFHRIFRAIGLPYTVAEAQQGTMGGAYSHEFHYLNEVGEDVVLRCPQCLH-- 234

Query: 462 RINTGVLLGEGAFYGPKFEYILKDA----IGRDWQCGTIQVDFNLPSR-FNAFYVNSHSE 516
                      A++G   +  +         +  + G         +R F     N    
Sbjct: 235 ------AANTDAYHG-SIDKCVHCGGELLQQKCIEVGHTFNLGQTYTRPFQLCLSNGD-- 285

Query: 517 KCHPVMIHRAVFGS-IERFIGI---MIENFKG-NLPLWLSPIQAIVTTITSSAVEYAQEI 571
                 ++   +G  I R +     M  + KG   P  ++P + I+   + S +  A+ +
Sbjct: 286 -----ALYMNSYGIGISRLLAAVAHMTHDEKGLVWPTAIAPWKIIILPASDSKIPDAEAL 340

Query: 572 ANLL-KSHHL-SIETDFRNET-INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
            + L ++    +I  D R       KIR+  +   P II  G+    + S  +    S T
Sbjct: 341 YDSLAQTFGANNILLDDRGHKSYGRKIRDAELIGFPFIITVGESYTRDGSFDVLARASNT 400

Query: 629 TQKVSLLDA 637
             K+     
Sbjct: 401 RYKLKAAQL 409


>gi|238796636|ref|ZP_04640143.1| Prolyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
 gi|238719614|gb|EEQ11423.1| Prolyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
          Length = 572

 Score =  149 bits (377), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 67/387 (17%), Positives = 127/387 (32%), Gaps = 46/387 (11%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGVRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E++ P V    LWQ+SG W+ Y   +       +     R F L P +    
Sbjct: 60  EMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGE-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLIRGEINSYKQLPLNFFQIQTKFRDEVRPRF-GVMRAREFLMKDAYSFHTTQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I++        V   T       S      AE+    ++ +  +     I
Sbjct: 174 YDAMYAAYSKIFERMDLNFRAVLADTGSIGGSASHEFQVLAESGEDDIVFSTGSDYAANI 233

Query: 464 NTGVLLGEGAFYGPKFE-----------------YILKDAIGRDWQCGTIQVDFNLPSRF 506
                L      G   E                    K  I +  +   +        + 
Sbjct: 234 EFAEALAPTEPRGTATEELRIVDTPNAKTIAELVEQFKLPIEKTVKTLLVHAHEESGHKL 293

Query: 507 NAFYVNSHSE------KCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTI 560
            A  V    E      +  P +     F S E    I+     G  P  L P+   +  +
Sbjct: 294 VALLVRGDHELNEIKAEKLPQVAKPLTFASEEEIRAII-----GAGPGSLGPVNLQLPVV 348

Query: 561 TSSAVEYAQEIANLLKSHHLSIETDFR 587
                  A     ++         D +
Sbjct: 349 -------ADRSVAVMSDFGAGANIDDK 368



 Score = 85.6 bits (210), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 58/168 (34%), Gaps = 13/168 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           I R  + G I Q+         A             ++    +G  + R +   IE N+ 
Sbjct: 405 IKRGIEVGHIFQLGTKYSEAMKATVQGEDG---RNQVMTMGCYGIGVSRVVAAAIEQNYD 461

Query: 544 GNLPLWL---SPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
               +W    +P Q  +  +         E A+E+   L+SH + +  D R E       
Sbjct: 462 DRGIIWPDAIAPFQVAILPMNMHKSFRVKELAEELYATLRSHGIDVILDDRKERPGVMFA 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  +  +P  I+ GD+      +  +   +   Q +   + I  L  +
Sbjct: 522 DMELIGVPHNIVIGDRNLDSEEVEYKHRRAGEKQMIKTSEIIEFLLSQ 569


>gi|322789351|gb|EFZ14663.1| hypothetical protein SINV_09736 [Solenopsis invicta]
          Length = 1422

 Score =  149 bits (377), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 94/531 (17%), Positives = 175/531 (32%), Gaps = 82/531 (15%)

Query: 116  SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            + ++++ EK  +EI  +         S      + E       V+IL S+ +        
Sbjct: 825  NKDISKAEKICEEIKKQGDKVRNLKSSKADKSIIDEE------VKILVSLKSDYK---NM 875

Query: 176  QGEWFDLCRGPHVRSTGQVKKFFKLMK-VAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
             G+ +     P   S  Q K      K VA +    D +        G     ++    +
Sbjct: 876  TGQDWKPASLPETASKKQSKPEKMSEKEVAKSANSKDVDSSKTGTRLGLEAKKEENFNDW 935

Query: 235  LYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEE 293
                        + + +   +     D SG        + I++ +  Y+  +IK    EE
Sbjct: 936  Y----------SQVITKSGMI--EYYDVSGCYILRPWTFSIWKVIKEYIDDEIKSMGVEE 983

Query: 294  INTPQ-VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
               P  V    L ++  H + +   +  V    +        A++P +       +   L
Sbjct: 984  CYFPIFVTRSVLEKEKAHVEDFAPEVAWVTKYGENDL-AEPIAIRPTSETIMYPAYAKWL 1042

Query: 353  KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLI 411
            +S  ELP+RL ++ +V R E        +R R F   + H  F TK +   E L+I ++ 
Sbjct: 1043 RSDTELPLRLNQWNNVVRWEFKDP-KPFLRTREFLWQEGHTAFATKLEAEQEVLQILDMY 1101

Query: 412  ISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
              +Y++     ++    T  EK  G D                                 
Sbjct: 1102 ARVYENLLAVPVVRGRKTEKEKFAGGD--------------------------------- 1128

Query: 472  GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
               Y    E       GR  Q  T        S+   F +    +    + +++  +G  
Sbjct: 1129 ---YTTTVE-AFISTNGRAIQGATSHHLGQNFSK--MFNIQVEGKTNEKMFVYQNSWGLT 1182

Query: 532  ERFIGIMIENFKGNLPLWL----SPIQAIVTT----------ITSSAVEYAQEIANLLKS 577
             R IG+MI     +  L L    +PIQ +V                 +    ++   L  
Sbjct: 1183 TRTIGVMIMIHGDDQGLVLPPNVAPIQIVVIPCGIAASMSESKKHELLTECSKLVERLSK 1242

Query: 578  HH-LSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS 626
                 ++ DFR N T  ++     +K +PI I  G ++  +  + + R  +
Sbjct: 1243 EGKFRVKADFRENRTPGWRFNHWELKGVPIRIELGPRDLEKNQVTLVRRDT 1293


>gi|304396668|ref|ZP_07378549.1| prolyl-tRNA synthetase [Pantoea sp. aB]
 gi|304356177|gb|EFM20543.1| prolyl-tRNA synthetase [Pantoea sp. aB]
          Length = 572

 Score =  149 bits (377), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 53/249 (21%), Positives = 99/249 (39%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            TQ  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TTQYLLSTQKETPSDAEVISHQLMLRAGMIRKLA---SGLYTWLPTGVRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    EI  P V    LWQ+SG W+ Y   +  +       +  R F L P +    
Sbjct: 60  EMNNAGAVEILMPVVQPADLWQESGRWEEYGPELLRI-----ADRHERPFVLGPTHEEVV 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+ L +  + +R+E      G+MR R F   DA+ F T +    E 
Sbjct: 115 TDLIRNELSSYKQLPLNLYQIQTKFRDEVRPRF-GVMRSREFIMKDAYSFHTSQASLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   G +   V+  T       S      A++    V+ +  +     I
Sbjct: 174 YDAMYRAYSQIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVIFSTDSDYAANI 233

Query: 464 NTGVLLGEG 472
                +   
Sbjct: 234 ELAEAVAPA 242



 Score = 86.0 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 57/167 (34%), Gaps = 13/167 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           I R  + G I Q+         A             ++    +G  I R +   IE    
Sbjct: 405 IKRGIEVGHIFQLGTKYSDALKASVQGEDG---RNQVMSMGCYGIGITRVVAAAIEQNHD 461

Query: 545 N----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +     P  L+P +  +  +         E A+E+   L++  + +  D R E       
Sbjct: 462 DRGIIWPAALAPFEVAILPMNMQKSFRVKELAEELYATLRAKGVEVILDDRKERPGVMFA 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  +  +P  I+ GD+    + I  +   +   Q +   + +  L K
Sbjct: 522 DMELIGVPHTIVIGDRNLDNQEIEYKSRRAGEKQMIKQDEIVEFLLK 568


>gi|15594747|ref|NP_212536.1| prolyl-tRNA synthetase [Borrelia burgdorferi B31]
 gi|13633966|sp|O51363|SYP_BORBU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|2688299|gb|AAC66767.1| prolyl-tRNA synthetase (proS) [Borrelia burgdorferi B31]
          Length = 488

 Score =  149 bits (377), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 76/431 (17%), Positives = 157/431 (36%), Gaps = 61/431 (14%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
           ++ ++   E+   + +  + ++  L   +     ++     G+ I+  + S + +K K+ 
Sbjct: 1   MSDFIASKEDDYSKWYLDIVQKAKLADYSPVKGCMVI-MPYGYSIWSKIQSILDKKFKET 59

Query: 290 DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
            +E    P ++     + +  H D +      +K A           L+P +      ++
Sbjct: 60  GHENAYFPMLIPYSFLEREKDHIDGFSPEFAIIKDAGGESL-AEPLVLRPTSETIIWNMY 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
           +  +KSYR+LP+++ ++ +V R E        +R   F   + H   T      E L+  
Sbjct: 119 SKWIKSYRDLPLKINQWANVVRWEKR--TRPFLRTTEFLWQEGH---TAHATEEEALEET 173

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
            LI+ +YK F                          E+ +   +   K S +++      
Sbjct: 174 LLILDVYKRF-------------------------IEDYLAIPVFCGKKSEKEKF----- 203

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAV 527
              GA      E +++D   +  Q  T      N    F+  + +   +  H   +  + 
Sbjct: 204 --AGAVSTYSIEALMQD--KKALQAATSHYLGLNFAKAFDVKFQDKDGKMRH---VFASS 256

Query: 528 FGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTT-------ITSSAVEYAQEIANLLK 576
           +G   R IG +I    +     LP  ++PI+ IV         I    ++Y+  + + LK
Sbjct: 257 WGVSTRLIGALIMVHSDEKGLVLPPRIAPIEIIVIPIFKKEDEINKKILDYSDCVVDALK 316

Query: 577 SHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT--TQKVS 633
                +E D     +  ++      K IPI +  G  +    S+ I R         ++S
Sbjct: 317 KAEFRVEIDKDVRSSPGFRFSSAEFKGIPIRLEVGINDVLLNSVTISRRDKDRKFKYQIS 376

Query: 634 LLDAIPILTKE 644
           L   I  +  E
Sbjct: 377 LDSLISKVKVE 387


>gi|15799876|ref|NP_285888.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 EDL933]
 gi|15829450|ref|NP_308223.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
 gi|168752178|ref|ZP_02777200.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4113]
 gi|168765280|ref|ZP_02790287.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4501]
 gi|168769963|ref|ZP_02794970.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4486]
 gi|168777697|ref|ZP_02802704.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4196]
 gi|168782925|ref|ZP_02807932.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4076]
 gi|168789305|ref|ZP_02814312.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC869]
 gi|168802460|ref|ZP_02827467.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC508]
 gi|195939891|ref|ZP_03085273.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4024]
 gi|208809448|ref|ZP_03251785.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4206]
 gi|208812619|ref|ZP_03253948.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4045]
 gi|208821168|ref|ZP_03261488.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4042]
 gi|209398549|ref|YP_002268803.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4115]
 gi|217324314|ref|ZP_03440398.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14588]
 gi|254791327|ref|YP_003076164.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
 gi|261226949|ref|ZP_05941230.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK2000]
 gi|261255353|ref|ZP_05947886.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK966]
 gi|291281017|ref|YP_003497835.1| Prolyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
 gi|81848971|sp|Q8X8W2|SYP_ECO57 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226731431|sp|B5Z0H4|SYP_ECO5E RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|12512925|gb|AAG54496.1|AE005195_5 proline tRNA synthetase [Escherichia coli O157:H7 str. EDL933]
 gi|13359652|dbj|BAB33619.1| proline tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
 gi|187767123|gb|EDU30967.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4196]
 gi|188013912|gb|EDU52034.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4113]
 gi|188999651|gb|EDU68637.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4076]
 gi|189361055|gb|EDU79474.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4486]
 gi|189364925|gb|EDU83341.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4501]
 gi|189371068|gb|EDU89484.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC869]
 gi|189375548|gb|EDU93964.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC508]
 gi|208729249|gb|EDZ78850.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4206]
 gi|208733896|gb|EDZ82583.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4045]
 gi|208741291|gb|EDZ88973.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4042]
 gi|209159949|gb|ACI37382.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4115]
 gi|209745624|gb|ACI71119.1| proline tRNA synthetase [Escherichia coli]
 gi|209745626|gb|ACI71120.1| proline tRNA synthetase [Escherichia coli]
 gi|209745628|gb|ACI71121.1| proline tRNA synthetase [Escherichia coli]
 gi|209745630|gb|ACI71122.1| proline tRNA synthetase [Escherichia coli]
 gi|209745632|gb|ACI71123.1| proline tRNA synthetase [Escherichia coli]
 gi|217320535|gb|EEC28959.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14588]
 gi|254590727|gb|ACT70088.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
 gi|290760890|gb|ADD54851.1| Prolyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
 gi|320190279|gb|EFW64929.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC1212]
 gi|320640001|gb|EFX09586.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. G5101]
 gi|320644771|gb|EFX13815.1| prolyl-tRNA synthetase [Escherichia coli O157:H- str. 493-89]
 gi|320652927|gb|EFX21165.1| prolyl-tRNA synthetase [Escherichia coli O157:H- str. H 2687]
 gi|320658315|gb|EFX26044.1| prolyl-tRNA synthetase [Escherichia coli O55:H7 str. 3256-97 TW
           07815]
 gi|320663625|gb|EFX30909.1| prolyl-tRNA synthetase [Escherichia coli O55:H7 str. USDA 5905]
 gi|320668938|gb|EFX35733.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. LSU-61]
 gi|326339750|gb|EGD63558.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. 1044]
 gi|326345084|gb|EGD68827.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. 1125]
          Length = 572

 Score =  149 bits (377), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 50/249 (20%), Positives = 99/249 (39%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGVRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E++ P V    LWQ+SG W+ Y   +       +     R F L P +    
Sbjct: 60  EMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGE-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHTSQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   G +   V+  T       S      A++    V+ +  +     I
Sbjct: 174 YDAMYAAYSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFSDTSDYAANI 233

Query: 464 NTGVLLGEG 472
                +   
Sbjct: 234 ELAEAIAPK 242



 Score = 86.8 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 59/178 (33%), Gaps = 13/178 (7%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
           P  +      I R  + G I Q+         A             ++    +G  + R 
Sbjct: 395 PSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDG---RNQILTMGCYGIGVTRV 451

Query: 535 IGIMIENFKGN----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDF 586
           +   IE          P  ++P Q  +  +         E A+++ + L++  + +  D 
Sbjct: 452 VAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLLDD 511

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R E       +  +  IP  I+ GD+      I  +   +   Q +   D +  L K+
Sbjct: 512 RKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVEYLVKQ 569


>gi|167043404|gb|ABZ08106.1| putative tRNA synthetase class II core domain (G, H, P, S and T)
           [uncultured marine microorganism HF4000_APKG1C9]
          Length = 506

 Score =  149 bits (377), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 71/422 (16%), Positives = 150/422 (35%), Gaps = 78/422 (18%)

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
              +  +    DL        G+  W   GWK    +    R +++   +EE N P ++ 
Sbjct: 18  NAWYPAIVEIADLVDKRYPIKGMDVWKPYGWKAMTLIDGLTRSQMRRTGHEEYNFPLLVP 77

Query: 302 QHLWQQSGHWD-----------------------SYRANMFAVKCADDTIKDLRTFALKP 338
           + L  +                             ++  ++ VK   DT  ++  F L+P
Sbjct: 78  EDLLDKENQLVSHLKASRDTGIDASELRVDEEEAGFKKEVYWVKHGGDTELEVPMF-LRP 136

Query: 339 MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE 398
            +      +F+  ++S+ +LP++  +  + +R E        +RVR     +AH     +
Sbjct: 137 TSETPMYTMFSLWIRSHADLPLKTFQIVNTFRYETK-QTRSFIRVREIHFFEAHTVHADQ 195

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNS 458
                 +                                    +DAE I++ +L  +   
Sbjct: 196 DGATAQIA-----------------------------------EDAE-IVQRLLHELCFP 219

Query: 459 SQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSR-FNAFYVNSHSEK 517
           +            GA++    + ++ +  GR  Q  T     +  +R FN  Y + + E 
Sbjct: 220 AIVSKRPSWDTFPGAWHSTAVDAVMPN--GRTLQVATYHHYRDQWARAFNLTYEDRNGET 277

Query: 518 CHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI----TSSAVEYAQ 569
                 H+  FG  ER +G ++    ++    +P  ++PIQ I+  +      + +   +
Sbjct: 278 Q---FCHQTTFGMSERLLGAIVGMHGDDSGLIMPPSIAPIQVILMPVAAHSDENVIPRVE 334

Query: 570 EIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASER--SIGIRRFGST 627
            +A  L+     ++ D R+     K  +  IK +PI +  G ++ +    +I +R  G  
Sbjct: 335 ALALDLQDSGFRVQVDARDLRPGTKHYDWEIKGVPIRLEIGPRDLASSQCTITLRTGGKI 394

Query: 628 TT 629
            +
Sbjct: 395 ES 396


>gi|170578851|ref|XP_001894567.1| Bifunctional aminoacyl-tRNA synthetase  [Brugia malayi]
 gi|158598757|gb|EDP36588.1| Bifunctional aminoacyl-tRNA synthetase , putative [Brugia malayi]
          Length = 544

 Score =  149 bits (377), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 79/446 (17%), Positives = 157/446 (35%), Gaps = 62/446 (13%)

Query: 220 IYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTL 279
           + G     +Q         +E+    + ++  + ++     D SG        + I++ +
Sbjct: 37  MKGRGDVKKQTKLGIEVTKDENYCEWYVQVITKAEMIEY-YDISGCYVLRPWSYAIWEFI 95

Query: 280 ISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALK 337
             +   KIK    +    P  + Q   + +  H   +   +  +  A  +       A++
Sbjct: 96  QEWFDEKIKKLGVKNCYFPLFVSQSALEKEKTHISDFAPEVAWITRAGQSDL-AEAIAIR 154

Query: 338 PMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCT 396
           P +       +   ++S+R+LP++L ++ +V R E        +R R F   + H  F T
Sbjct: 155 PTSETVMYPSYAKWVQSHRDLPIKLNQWCNVVRWEFKHPT-PFLRTREFLWQEGHTAFQT 213

Query: 397 KEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIK 456
           K +  +E  KI +L   +Y D     ++    T  EK  G +                  
Sbjct: 214 KAEAEDEVFKILDLYAQVYTDLLAIPVIKGRKTEKEKFAGGE------------------ 255

Query: 457 NSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHS 515
                             +    E  +    GR  Q  T   +  N    FN  + + + 
Sbjct: 256 ------------------FTTTVEAYVP-INGRGIQGATSHHLGQNFSKMFNISFEDPNG 296

Query: 516 EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTTIT---------- 561
                V   +  +G   R IG ++     N  L L P    IQ ++  +           
Sbjct: 297 GGK--VYAWQNSWGLSTRTIGAVVMIHGDNYGLVLPPRIAAIQMVIVPVGITARTKDEQK 354

Query: 562 SSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIG 620
           ++ +E A+E+ N+L    +  E D R+  +  +K     +K +P+ I  G K+ +   I 
Sbjct: 355 TALIEKAKEVNNILLDVGIRTELDVRDNISPGWKFNHWELKGVPVRIEIGPKDLANSQIT 414

Query: 621 IRRFGSTTTQKVSLLDAIPILTKESL 646
                S   + + + D +    K+ L
Sbjct: 415 CVIRYSGEKRIIPI-DVLATKCKDML 439


>gi|324504606|gb|ADY41988.1| Bifunctional aminoacyl-tRNA synthetase [Ascaris suum]
          Length = 401

 Score =  149 bits (377), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 66/333 (19%), Positives = 117/333 (35%), Gaps = 60/333 (18%)

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
              A++P +       +   ++S+R+LP+RL ++ +V R E        +R R F   + 
Sbjct: 3   EPIAIRPTSETVMYPSYAKWVQSHRDLPIRLNQWCNVVRWEFKHPT-PFLRTREFLWQEG 61

Query: 392 HV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKG 450
           H  F T ++   E  +I +L   IY D     ++    +  EK  G D            
Sbjct: 62  HTAFHTAKEAETEVYQILDLYAQIYTDLLAIPVVKGRKSEKEKFAGGD------------ 109

Query: 451 VLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAF 509
                                   +    E  +    GR  Q  T   +  N    F+  
Sbjct: 110 ------------------------FTTTVEAYVP-VNGRSIQGATSHHLGQNFSKMFDIS 144

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTTITSSA- 564
           +      K       +  +G   R IG MI     +  L L P    IQ IV  +  +A 
Sbjct: 145 FEEPD--KGGKAYAWQNSWGLSTRTIGAMIMIHGDDNGLVLPPRVAAIQMIVVPVGVTAQ 202

Query: 565 ---------VEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEA 614
                    +  A+EI +LL S  +  E+D R+  +  +K     +K +P+ +  G ++ 
Sbjct: 203 TSEEQRKMLICKAEEITDLLVSVGIRAESDLRDNYSPGWKFNHWELKGVPVRVEVGPRDV 262

Query: 615 SERSIGIRRFGSTTTQKVS---LLDAIPILTKE 644
           +   +      S   + +    L +A   +  E
Sbjct: 263 ANNQVTCVIRLSGEKRAIPVSGLAEASKKMLNE 295


>gi|251788479|ref|YP_003003200.1| prolyl-tRNA synthetase [Dickeya zeae Ech1591]
 gi|247537100|gb|ACT05721.1| prolyl-tRNA synthetase [Dickeya zeae Ech1591]
          Length = 572

 Score =  149 bits (377), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 47/218 (21%), Positives = 89/218 (40%), Gaps = 12/218 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYMLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGLRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    EI+ P V    LWQ+SG W+ Y   +       D     R F L P +    
Sbjct: 60  EMNNAGAIEISMPVVQPADLWQESGRWEQYGPELLRFVDRGD-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + + SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++     
Sbjct: 115 TDLIRNEISSYKQLPLNFYQIQTKFRDEVRPRF-GVMRAREFLMKDAYSFHTTQESLQVT 173

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWD 442
                   S  K F    +  +        +G +A  +
Sbjct: 174 YDAMFAAYS--KIFSRMDLDFRPVQADTGSIGGNASHE 209



 Score = 86.4 bits (212), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 53/168 (31%), Gaps = 11/168 (6%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           I R  + G I Q+         A             M    +   + R I   IE    +
Sbjct: 405 IKRGIEVGHIFQLGKKYSEALKATVQGEDGRNQTLTMGCYGI--GVTRVIAAAIEQNHDD 462

Query: 546 ----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
                P  ++P Q  +  +         E A+ I   L+++ + +  D R E       +
Sbjct: 463 RGIIWPDAITPFQVAILPMNMHKSFRVQEVAEGIYQQLRANGIDVLLDDRKERPGVMFAD 522

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
             +  IP  I+ GD+      I  +       + +   D +  L  + 
Sbjct: 523 MELIGIPHTIVIGDRNLDNDEIEYKHRRKGEKEMIKAGDIVEFLLSQC 570


>gi|312128280|ref|YP_003993154.1| prolyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
 gi|311778299|gb|ADQ07785.1| prolyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
          Length = 572

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 49/262 (18%), Positives = 107/262 (40%), Gaps = 22/262 (8%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
           +        ++E   H+ + R   +  ++   SG+  +   G+++ + + + +R ++   
Sbjct: 8   MPTLKETPSDAEIESHKLMLRSGFMRQLS---SGIYVYLPLGYRVLRKIENIVREEMDRS 64

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
             +E++   ++ + LW++SG W  +   MF +K  ++     R + L P +      +  
Sbjct: 65  GAQEVHMSALMPKELWEESGRWAVFGPEMFRIKDRNE-----REYCLGPTHEEAFTYIVR 119

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIH 408
           + + SYR+LP  L +  + +R+E      G+MR R FT  DA+ F   E+  +    K++
Sbjct: 120 NEISSYRDLPKILYQIQTKFRDERRPRF-GVMRCREFTMKDAYSFDIDEKGLDISYQKMY 178

Query: 409 NLIISIYKDFGFEKIMVK-----------LSTRPEKRVGSDALWDDAENIMKGVLDTIKN 457
           +  + I+K  G +  +V+                   VG   +           L+  + 
Sbjct: 179 DAYVRIFKRCGLDVKIVEADTGAMGGASSHEFMVPSSVGEAEIAYCKACGYAANLEKAEC 238

Query: 458 SSQDRINTGVLLGEGAFYGPKF 479
             +   N   L  +   Y P  
Sbjct: 239 LDEPVENNEELKEKQEVYTPNV 260



 Score = 87.9 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 39/168 (23%), Positives = 66/168 (39%), Gaps = 14/168 (8%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G I  +       FN  Y +   EK   +M    +   I R    +IE       
Sbjct: 402 RGIEVGHIFKLGTKYTQAFNCVYTDEKGEKKLMIMGCYGI--GINRTAAAIIEQMHDEDG 459

Query: 546 --LPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              P+ ++P + IV  +     +  + A EI   L+ + + +  D R+E    K ++  +
Sbjct: 460 IIWPITVAPYEVIVVPVNVKDENQNKIAFEIYENLQKNGVEVLIDDRDERAGVKFKDADL 519

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI---LTKES 645
             IP  +  G K  SE  + IR   +  + +V +  AI     L KE 
Sbjct: 520 IGIPFRVTVGKK-ISEGKLEIRNRRTKESFEVEIEKAIEFVMNLIKEE 566


>gi|311103966|ref|YP_003976819.1| prolyl-tRNA synthetase [Achromobacter xylosoxidans A8]
 gi|310758655|gb|ADP14104.1| prolyl-tRNA synthetase [Achromobacter xylosoxidans A8]
          Length = 575

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 47/196 (23%), Positives = 83/196 (42%), Gaps = 11/196 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +   +        E+E   H+ + R   +  +A    G+  +   G K+ + + + +R 
Sbjct: 3   ASNYHINTLKEAPSEAEVASHQLMTRAGMIRKLA---GGIYTYMPLGLKVIRKVEAIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LWQ+SG W+ Y A +  +K      +  R F L+P +    
Sbjct: 60  EMNAAGAIELLMPVVQPAELWQESGRWEQYGAELLRIKD-----RHQRDFVLQPTSEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + + SYR+LPV      + +R+E      GLMR R FT  DA+ F   E      
Sbjct: 115 TDIARNEIHSYRQLPVNFYHIQTKFRDERRPRF-GLMRGREFTMKDAYSFDRDEAGAQAS 173

Query: 405 LK-IHNLIISIYKDFG 419
              ++N  + I+   G
Sbjct: 174 YDTMYNAYMRIFGRLG 189



 Score = 77.5 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 22/154 (14%), Positives = 57/154 (37%), Gaps = 9/154 (5%)

Query: 497 QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN----LPLWLS 551
            V +       A       E   P ++    +G  + R +G  IE          P  ++
Sbjct: 415 HVFYLGKKYSEALKATFLDETGKPAVLEMGCYGIGVTRIVGAAIEQNHDARGIIWPRAIA 474

Query: 552 PIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIII 607
           P + ++  +    + +  + AQ++   L +  + +  D R+        E  +   P+ +
Sbjct: 475 PFEVVICPVGWGKSETVRDTAQKLYESLLARGVDVILDDRDARPGVMFAEWELIGAPLRV 534

Query: 608 ICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
             G++  ++  + ++    T   K+ +  A+  +
Sbjct: 535 TVGERGLNDGVVELQARRETEAAKIPVESALEAV 568


>gi|297792591|ref|XP_002864180.1| hypothetical protein ARALYDRAFT_495320 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297310015|gb|EFH40439.1| hypothetical protein ARALYDRAFT_495320 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 542

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 59/402 (14%), Positives = 137/402 (34%), Gaps = 60/402 (14%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
            +    + +    +     +  +    +L         ++     G+ I++ +  Y+  K
Sbjct: 57  DRLRSDRAVTPRSQDFNAWYLDVIASAELADYGPVRGTMVI-RPYGYAIWEAIQEYLNVK 115

Query: 287 IKD-DYEEINTPQVLDQHL-WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
            K+  +  +  PQ +      +++ H + +   +  V        + +   ++P +    
Sbjct: 116 FKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTVGGGKELEEK-LVVRPTSETIV 174

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNE 403
             +F   + SYR+LP+ + ++ +V R E        +R   F   + H    T E+   E
Sbjct: 175 NHMFTQWIHSYRDLPLMINQWANVTRWEMR--TKPFIRTLEFLWQEGHTAHATPEEAEKE 232

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             ++  +      +     ++    ++ E   G+D                        I
Sbjct: 233 AKQMIEIYTRFAFEHTAIPVIPGRKSKLETFAGAD------------------------I 268

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVM 522
              +    G                +  Q GT   +  N    F   + + + E+ H   
Sbjct: 269 TYTIEAMMG--------------DRKALQAGTSHNLGQNFSRAFGTQFADENGERQH--- 311

Query: 523 IHRAVFGSIERFIGIMIENFKGNL----PLWLSPIQAIVTTI------TSSAVEYAQEIA 572
           + +  +    RFIG +I     +     P  ++PIQ ++  I       S  +  A  + 
Sbjct: 312 VWQTSWAVSTRFIGGIIMTHGDDTGLMLPPKIAPIQVVIVPIWKKDTEKSGVLCAASSVK 371

Query: 573 NLLKSHHLSIETDFRN-ETINYKIREHSIKKIPIIIICGDKE 613
             L++  + ++ D  +  T  +K     +K IP+ I  G ++
Sbjct: 372 EALQTAGVRVKLDDTDQRTPGWKFNFWEMKGIPLRIEIGPRD 413


>gi|320180897|gb|EFW55819.1| prolyl-tRNA synthetase [Shigella boydii ATCC 9905]
          Length = 572

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 50/249 (20%), Positives = 99/249 (39%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGVRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E++ P V    LWQ+SG W+ Y   +       +     R F L P +    
Sbjct: 60  EMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGE-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHTSQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   G +   V+  T       S      A++    V+ +  +     I
Sbjct: 174 YDAMYAAYSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFSDTSDYAANI 233

Query: 464 NTGVLLGEG 472
                +   
Sbjct: 234 ELAEAIAPK 242



 Score = 86.8 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 59/178 (33%), Gaps = 13/178 (7%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
           P  +      I R  + G I Q+         A             ++    +G  + R 
Sbjct: 395 PSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDG---RNQILTMGCYGIGVTRV 451

Query: 535 IGIMIENFKGN----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDF 586
           +   IE          P  ++P Q  +  +         E A+++ + L++  + +  D 
Sbjct: 452 VAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLLDD 511

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R E       +  +  IP  I+ GD+      I  +   +   Q +   D +  L K+
Sbjct: 512 RKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVEYLVKQ 569


>gi|309700402|emb|CBI99691.1| prolyl-tRNA synthetase [Escherichia coli ETEC H10407]
          Length = 572

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 50/249 (20%), Positives = 99/249 (39%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGVRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E++ P V    LWQ+SG W+ Y   +       +     R F L P +    
Sbjct: 60  EMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGE-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHTSQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   G +   V+  T       S      A++    V+ +  +     I
Sbjct: 174 YDAMYAAYSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFSDTSDYAANI 233

Query: 464 NTGVLLGEG 472
                +   
Sbjct: 234 ELAEAIAPK 242



 Score = 83.7 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 59/178 (33%), Gaps = 13/178 (7%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
           P  +      I R  + G I Q+         A             ++    +G  + R 
Sbjct: 395 PSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDG---RNQILTMGCYGIGVTRV 451

Query: 535 IGIMIENFKGN----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDF 586
           +   IE          P  ++P Q  +  +         E A+++ + L++  + +  D 
Sbjct: 452 VAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLLDD 511

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R E       +  +  IP  I+ GD+      I  +   +   Q +   D +  L K+
Sbjct: 512 RKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNCEKQLIKTGDIVDYLVKQ 569


>gi|294634711|ref|ZP_06713243.1| proline--tRNA ligase [Edwardsiella tarda ATCC 23685]
 gi|291091887|gb|EFE24448.1| proline--tRNA ligase [Edwardsiella tarda ATCC 23685]
          Length = 572

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 48/241 (19%), Positives = 96/241 (39%), Gaps = 11/241 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++   + + +R 
Sbjct: 3   TSQYLLSTLKETPADAEVVSHQLMLRAGMIRKLA---SGLYTWLPTGLRVLNKVENIVRE 59

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E++ P V    LWQ+SG W+ Y   +       +     R F L P +    
Sbjct: 60  EMNYAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGE-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + + SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLVRNEISSYKQLPLNFYQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHTTQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   G +   V+  T       S      A++    ++ +  +     I
Sbjct: 174 YDAMYAAYSRIFSRMGLDFRAVQADTGSIGGNASHEFQVLAQSGEDDIVFSTDSDYAANI 233

Query: 464 N 464
            
Sbjct: 234 E 234



 Score = 89.5 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 28/178 (15%), Positives = 56/178 (31%), Gaps = 13/178 (7%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
           P  +      I R  + G I Q+        NA             ++    +G  + R 
Sbjct: 395 PSPDGHGTLLIKRGIEVGHIFQLGTKYTEALNATVQGEDG---RNQLMTMGCYGIGVTRV 451

Query: 535 IGIMIENFKGN----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDF 586
           +   IE          P  ++P Q  +  +         + A+ + + L+   + +  D 
Sbjct: 452 VAAAIEQNHDERGIIWPDAIAPFQVAILPMNMHKSFRVKDVAERLYDALRLKGIEVLLDD 511

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R E       +  +  IP  I+ GD+      +  +         +SL +    L  +
Sbjct: 512 RKERPGVMFADMELIGIPYTIVIGDRNLDNNEVEYKYRRDGEKLMISLDEIEAFLLAQ 569


>gi|218703449|ref|YP_002410968.1| prolyl-tRNA synthetase [Escherichia coli UMN026]
 gi|293403264|ref|ZP_06647361.1| prolyl-tRNA synthetase [Escherichia coli FVEC1412]
 gi|293408287|ref|ZP_06652127.1| prolyl-tRNA synthetase [Escherichia coli B354]
 gi|298378800|ref|ZP_06988684.1| prolyl-tRNA synthetase [Escherichia coli FVEC1302]
 gi|300900763|ref|ZP_07118909.1| prolyl-tRNA synthetase [Escherichia coli MS 198-1]
 gi|301025919|ref|ZP_07189405.1| prolyl-tRNA synthetase [Escherichia coli MS 69-1]
 gi|331661569|ref|ZP_08362493.1| proline--tRNA ligase [Escherichia coli TA143]
 gi|226701283|sp|B7N862|SYP_ECOLU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|218430546|emb|CAR11412.1| prolyl-tRNA synthetase [Escherichia coli UMN026]
 gi|284919970|emb|CBG33025.1| prolyl-tRNA synthetase [Escherichia coli 042]
 gi|291430179|gb|EFF03193.1| prolyl-tRNA synthetase [Escherichia coli FVEC1412]
 gi|291472538|gb|EFF15020.1| prolyl-tRNA synthetase [Escherichia coli B354]
 gi|298281134|gb|EFI22635.1| prolyl-tRNA synthetase [Escherichia coli FVEC1302]
 gi|300355748|gb|EFJ71618.1| prolyl-tRNA synthetase [Escherichia coli MS 198-1]
 gi|300395774|gb|EFJ79312.1| prolyl-tRNA synthetase [Escherichia coli MS 69-1]
 gi|331061484|gb|EGI33447.1| proline--tRNA ligase [Escherichia coli TA143]
 gi|332341528|gb|AEE54862.1| prolyl-tRNA synthetase ProS [Escherichia coli UMNK88]
          Length = 572

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 50/249 (20%), Positives = 99/249 (39%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGVRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E++ P V    LWQ+SG W+ Y   +       +     R F L P +    
Sbjct: 60  EMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGE-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHTSQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   G +   V+  T       S      A++    V+ +  +     I
Sbjct: 174 YDAMYAAYSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFSDTSDYAANI 233

Query: 464 NTGVLLGEG 472
                +   
Sbjct: 234 ELAEAIAPK 242



 Score = 86.0 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 59/178 (33%), Gaps = 13/178 (7%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
           P  +      I R  + G I Q+         A             ++    +G  + R 
Sbjct: 395 PSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDG---RNQILTMGCYGIGVTRV 451

Query: 535 IGIMIENFKGN----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDF 586
           +   IE          P  ++P Q  +  +         E A+++ + L++  + +  D 
Sbjct: 452 VAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLLDD 511

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R E       +  +  IP  I+ GD+      I  +   +   Q +   D +  L K+
Sbjct: 512 RKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVDYLVKQ 569


>gi|218693660|ref|YP_002401327.1| prolyl-tRNA synthetase [Escherichia coli 55989]
 gi|256021628|ref|ZP_05435493.1| prolyl-tRNA synthetase [Shigella sp. D9]
 gi|293476853|ref|ZP_06665261.1| prolyl-tRNA synthetase [Escherichia coli B088]
 gi|300921804|ref|ZP_07137964.1| prolyl-tRNA synthetase [Escherichia coli MS 182-1]
 gi|301325160|ref|ZP_07218690.1| prolyl-tRNA synthetase [Escherichia coli MS 78-1]
 gi|254782900|sp|B7LHA4|SYP_ECO55 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|218350392|emb|CAU96077.1| prolyl-tRNA synthetase [Escherichia coli 55989]
 gi|291321306|gb|EFE60748.1| prolyl-tRNA synthetase [Escherichia coli B088]
 gi|300421799|gb|EFK05110.1| prolyl-tRNA synthetase [Escherichia coli MS 182-1]
 gi|300847966|gb|EFK75726.1| prolyl-tRNA synthetase [Escherichia coli MS 78-1]
 gi|323935035|gb|EGB31408.1| prolyl-tRNA synthetase [Escherichia coli E1520]
          Length = 572

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 50/249 (20%), Positives = 99/249 (39%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGVRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E++ P V    LWQ+SG W+ Y   +       +     R F L P +    
Sbjct: 60  EMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGE-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHTSQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   G +   V+  T       S      A++    V+ +  +     I
Sbjct: 174 YDAMYAAYSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFSDTSDYAANI 233

Query: 464 NTGVLLGEG 472
                +   
Sbjct: 234 ELAEAIAPK 242



 Score = 86.8 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 59/178 (33%), Gaps = 13/178 (7%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
           P  +      I R  + G I Q+         A             ++    +G  + R 
Sbjct: 395 PSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDG---RNQILTMGCYGIGVTRV 451

Query: 535 IGIMIENFKGN----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDF 586
           +   IE          P  ++P Q  +  +         E A+++ + L++  + +  D 
Sbjct: 452 VAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLLDD 511

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R E       +  +  IP  I+ GD+      I  +   +   Q +   D +  L K+
Sbjct: 512 RKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVEYLVKQ 569


>gi|82775586|ref|YP_401933.1| prolyl-tRNA synthetase [Shigella dysenteriae Sd197]
 gi|114152251|sp|Q32JR3|SYP_SHIDS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|81239734|gb|ABB60444.1| proline tRNA synthetase [Shigella dysenteriae Sd197]
          Length = 572

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 50/249 (20%), Positives = 99/249 (39%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGVRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E++ P V    LWQ+SG W+ Y   +       +     R F L P +    
Sbjct: 60  EMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGE-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHTSQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   G +   V+  T       S      A++    V+ +  +     I
Sbjct: 174 YDAMYAAYSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFSDTSDYAANI 233

Query: 464 NTGVLLGEG 472
                +   
Sbjct: 234 ELAEAIAPK 242



 Score = 86.8 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 59/178 (33%), Gaps = 13/178 (7%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
           P  +      I R  + G I Q+         A             ++    +G  + R 
Sbjct: 395 PSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDG---RNQILTMGCYGIGVTRV 451

Query: 535 IGIMIENFKGN----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDF 586
           +   IE          P  ++P Q  +  +         E A+++ + L++  + +  D 
Sbjct: 452 VAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLLDD 511

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R E       +  +  IP  I+ GD+      I  +   +   Q +   D +  L K+
Sbjct: 512 RKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVEYLVKQ 569


>gi|194428300|ref|ZP_03060842.1| prolyl-tRNA synthetase [Escherichia coli B171]
 gi|194413675|gb|EDX29955.1| prolyl-tRNA synthetase [Escherichia coli B171]
          Length = 572

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 50/249 (20%), Positives = 99/249 (39%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGVRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E++ P V    LWQ+SG W+ Y   +       +     R F L P +    
Sbjct: 60  EMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGE-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHTSQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   G +   V+  T       S      A++    V+ +  +     I
Sbjct: 174 YDAMYAAYSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFSDTSDYAANI 233

Query: 464 NTGVLLGEG 472
                +   
Sbjct: 234 ELAEAIAPK 242



 Score = 82.1 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 29/178 (16%), Positives = 58/178 (32%), Gaps = 13/178 (7%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
           P  +      I R  + G I Q+         A             ++    +G  + R 
Sbjct: 395 PSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDG---RNQILTMGCYGIGVTRV 451

Query: 535 IGIMIENFKGN----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDF 586
           +   IE          P  ++P Q  +  +         E A+++ + L++  + +  D 
Sbjct: 452 VAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLLDD 511

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R E       +  +  IP  I+  D+      I  +   +   Q +   D +  L K+
Sbjct: 512 RKERPGVMFADMELIGIPHTIVLSDRNLDNDDIEYKYRRNGEKQLIKTGDIVEYLVKQ 569


>gi|30061751|ref|NP_835922.1| prolyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|56479623|ref|NP_706140.2| prolyl-tRNA synthetase [Shigella flexneri 2a str. 301]
 gi|74310815|ref|YP_309234.1| prolyl-tRNA synthetase [Shigella sonnei Ss046]
 gi|82542793|ref|YP_406740.1| prolyl-tRNA synthetase [Shigella boydii Sb227]
 gi|157159661|ref|YP_001456979.1| prolyl-tRNA synthetase [Escherichia coli HS]
 gi|162139361|ref|YP_687766.2| prolyl-tRNA synthetase [Shigella flexneri 5 str. 8401]
 gi|170021452|ref|YP_001726406.1| prolyl-tRNA synthetase [Escherichia coli ATCC 8739]
 gi|187730943|ref|YP_001878997.1| prolyl-tRNA synthetase [Shigella boydii CDC 3083-94]
 gi|188494186|ref|ZP_03001456.1| prolyl-tRNA synthetase [Escherichia coli 53638]
 gi|193063143|ref|ZP_03044234.1| prolyl-tRNA synthetase [Escherichia coli E22]
 gi|193067639|ref|ZP_03048606.1| prolyl-tRNA synthetase [Escherichia coli E110019]
 gi|194439920|ref|ZP_03071982.1| prolyl-tRNA synthetase [Escherichia coli 101-1]
 gi|209917387|ref|YP_002291471.1| prolyl-tRNA synthetase [Escherichia coli SE11]
 gi|218552775|ref|YP_002385688.1| prolyl-tRNA synthetase [Escherichia coli IAI1]
 gi|253774778|ref|YP_003037609.1| prolyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|254160314|ref|YP_003043422.1| prolyl-tRNA synthetase [Escherichia coli B str. REL606]
 gi|256025507|ref|ZP_05439372.1| prolyl-tRNA synthetase [Escherichia sp. 4_1_40B]
 gi|260842426|ref|YP_003220204.1| prolyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009]
 gi|260853405|ref|YP_003227296.1| prolyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368]
 gi|293418080|ref|ZP_06660702.1| prolyl-tRNA synthetase [Escherichia coli B185]
 gi|297519907|ref|ZP_06938293.1| prolyl-tRNA synthetase [Escherichia coli OP50]
 gi|300820114|ref|ZP_07100286.1| prolyl-tRNA synthetase [Escherichia coli MS 107-1]
 gi|300825388|ref|ZP_07105464.1| prolyl-tRNA synthetase [Escherichia coli MS 119-7]
 gi|300932153|ref|ZP_07147436.1| prolyl-tRNA synthetase [Escherichia coli MS 187-1]
 gi|300949771|ref|ZP_07163746.1| prolyl-tRNA synthetase [Escherichia coli MS 116-1]
 gi|300956080|ref|ZP_07168404.1| prolyl-tRNA synthetase [Escherichia coli MS 175-1]
 gi|301028690|ref|ZP_07191910.1| prolyl-tRNA synthetase [Escherichia coli MS 196-1]
 gi|301646520|ref|ZP_07246394.1| prolyl-tRNA synthetase [Escherichia coli MS 146-1]
 gi|307136795|ref|ZP_07496151.1| prolyl-tRNA synthetase [Escherichia coli H736]
 gi|307311357|ref|ZP_07590999.1| prolyl-tRNA synthetase [Escherichia coli W]
 gi|331640649|ref|ZP_08341797.1| proline--tRNA ligase [Escherichia coli H736]
 gi|331666440|ref|ZP_08367321.1| proline--tRNA ligase [Escherichia coli TA271]
 gi|331680776|ref|ZP_08381435.1| proline--tRNA ligase [Escherichia coli H591]
 gi|81839318|sp|Q83MC8|SYP_SHIFL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|114152250|sp|Q325U6|SYP_SHIBS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|114152252|sp|Q3Z5G3|SYP_SHISS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|148887036|sp|Q0T815|SYP_SHIF8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|166980120|sp|A7ZWE2|SYP_ECOHS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|189083498|sp|B1IQE6|SYP_ECOLC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226701281|sp|B7M1Z9|SYP_ECO8A RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226701284|sp|B6HZR3|SYP_ECOSE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226701339|sp|B2U338|SYP_SHIB3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|30039993|gb|AAP15727.1| proline tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|56383174|gb|AAN41847.2| proline tRNA synthetase [Shigella flexneri 2a str. 301]
 gi|73854292|gb|AAZ86999.1| proline tRNA synthetase [Shigella sonnei Ss046]
 gi|81244204|gb|ABB64912.1| proline tRNA synthetase [Shigella boydii Sb227]
 gi|157065341|gb|ABV04596.1| prolyl-tRNA synthetase [Escherichia coli HS]
 gi|169756380|gb|ACA79079.1| prolyl-tRNA synthetase [Escherichia coli ATCC 8739]
 gi|187427935|gb|ACD07209.1| prolyl-tRNA synthetase [Shigella boydii CDC 3083-94]
 gi|188489385|gb|EDU64488.1| prolyl-tRNA synthetase [Escherichia coli 53638]
 gi|192931051|gb|EDV83654.1| prolyl-tRNA synthetase [Escherichia coli E22]
 gi|192959051|gb|EDV89487.1| prolyl-tRNA synthetase [Escherichia coli E110019]
 gi|194421166|gb|EDX37191.1| prolyl-tRNA synthetase [Escherichia coli 101-1]
 gi|209910646|dbj|BAG75720.1| prolyl-tRNA synthase [Escherichia coli SE11]
 gi|218359543|emb|CAQ97083.1| prolyl-tRNA synthetase [Escherichia coli IAI1]
 gi|242376026|emb|CAQ30709.1| prolyl-tRNA synthetase [Escherichia coli BL21(DE3)]
 gi|253325822|gb|ACT30424.1| prolyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253972215|gb|ACT37886.1| prolyl-tRNA synthetase [Escherichia coli B str. REL606]
 gi|253976424|gb|ACT42094.1| prolyl-tRNA synthetase [Escherichia coli BL21(DE3)]
 gi|257752054|dbj|BAI23556.1| prolyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368]
 gi|257757573|dbj|BAI29070.1| prolyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009]
 gi|281599550|gb|ADA72534.1| putative prolyl-tRNA synthetase [Shigella flexneri 2002017]
 gi|291430798|gb|EFF03796.1| prolyl-tRNA synthetase [Escherichia coli B185]
 gi|299878289|gb|EFI86500.1| prolyl-tRNA synthetase [Escherichia coli MS 196-1]
 gi|300317074|gb|EFJ66858.1| prolyl-tRNA synthetase [Escherichia coli MS 175-1]
 gi|300450836|gb|EFK14456.1| prolyl-tRNA synthetase [Escherichia coli MS 116-1]
 gi|300460090|gb|EFK23583.1| prolyl-tRNA synthetase [Escherichia coli MS 187-1]
 gi|300522148|gb|EFK43217.1| prolyl-tRNA synthetase [Escherichia coli MS 119-7]
 gi|300527328|gb|EFK48390.1| prolyl-tRNA synthetase [Escherichia coli MS 107-1]
 gi|301075273|gb|EFK90079.1| prolyl-tRNA synthetase [Escherichia coli MS 146-1]
 gi|306908336|gb|EFN38834.1| prolyl-tRNA synthetase [Escherichia coli W]
 gi|315059413|gb|ADT73740.1| prolyl-tRNA synthetase [Escherichia coli W]
 gi|315616320|gb|EFU96938.1| prolyl-tRNA synthetase [Escherichia coli 3431]
 gi|320173324|gb|EFW48527.1| prolyl-tRNA synthetase [Shigella dysenteriae CDC 74-1112]
 gi|320186617|gb|EFW61342.1| prolyl-tRNA synthetase [Shigella flexneri CDC 796-83]
 gi|320200278|gb|EFW74864.1| prolyl-tRNA synthetase [Escherichia coli EC4100B]
 gi|323157966|gb|EFZ44068.1| prolyl-tRNA synthetase [Escherichia coli EPECa14]
 gi|323165899|gb|EFZ51681.1| prolyl-tRNA synthetase [Shigella sonnei 53G]
 gi|323170987|gb|EFZ56636.1| prolyl-tRNA synthetase [Escherichia coli LT-68]
 gi|323380028|gb|ADX52296.1| prolyl-tRNA synthetase [Escherichia coli KO11]
 gi|323939929|gb|EGB36127.1| prolyl-tRNA synthetase [Escherichia coli E482]
 gi|323945673|gb|EGB41722.1| prolyl-tRNA synthetase [Escherichia coli H120]
 gi|323959956|gb|EGB55603.1| prolyl-tRNA synthetase [Escherichia coli H489]
 gi|323970674|gb|EGB65930.1| prolyl-tRNA synthetase [Escherichia coli TA007]
 gi|324019415|gb|EGB88634.1| prolyl-tRNA synthetase [Escherichia coli MS 117-3]
 gi|324118316|gb|EGC12211.1| prolyl-tRNA synthetase [Escherichia coli E1167]
 gi|331040395|gb|EGI12602.1| proline--tRNA ligase [Escherichia coli H736]
 gi|331066651|gb|EGI38528.1| proline--tRNA ligase [Escherichia coli TA271]
 gi|331072239|gb|EGI43575.1| proline--tRNA ligase [Escherichia coli H591]
 gi|332762067|gb|EGJ92338.1| prolyl-tRNA synthetase [Shigella flexneri 2747-71]
 gi|332765044|gb|EGJ95272.1| prolyl-tRNA synthetase [Shigella flexneri K-671]
 gi|332768698|gb|EGJ98878.1| prolyl-tRNA synthetase [Shigella flexneri 2930-71]
 gi|333009265|gb|EGK28721.1| prolyl-tRNA synthetase [Shigella flexneri K-218]
 gi|333010690|gb|EGK30123.1| prolyl-tRNA synthetase [Shigella flexneri VA-6]
 gi|333011036|gb|EGK30455.1| prolyl-tRNA synthetase [Shigella flexneri K-272]
 gi|333021831|gb|EGK41080.1| prolyl-tRNA synthetase [Shigella flexneri K-227]
 gi|333022223|gb|EGK41462.1| prolyl-tRNA synthetase [Shigella flexneri K-304]
          Length = 572

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 50/249 (20%), Positives = 99/249 (39%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGVRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E++ P V    LWQ+SG W+ Y   +       +     R F L P +    
Sbjct: 60  EMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGE-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHTSQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   G +   V+  T       S      A++    V+ +  +     I
Sbjct: 174 YDAMYAAYSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFSDTSDYAANI 233

Query: 464 NTGVLLGEG 472
                +   
Sbjct: 234 ELAEAIAPK 242



 Score = 86.8 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 59/178 (33%), Gaps = 13/178 (7%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
           P  +      I R  + G I Q+         A             ++    +G  + R 
Sbjct: 395 PSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDG---RNQILTMGCYGIGVTRV 451

Query: 535 IGIMIENFKGN----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDF 586
           +   IE          P  ++P Q  +  +         E A+++ + L++  + +  D 
Sbjct: 452 VAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLLDD 511

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R E       +  +  IP  I+ GD+      I  +   +   Q +   D +  L K+
Sbjct: 512 RKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVEYLVKQ 569


>gi|108758355|ref|YP_634772.1| prolyl-tRNA synthetase [Myxococcus xanthus DK 1622]
 gi|123073939|sp|Q1CXV1|SYP_MYXXD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|108462235|gb|ABF87420.1| prolyl-tRNA synthetase [Myxococcus xanthus DK 1622]
          Length = 483

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 66/415 (15%), Positives = 150/415 (36%), Gaps = 62/415 (14%)

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
              +  L ++  L   ++    ++     G+ +++ +   + +  KD  ++    P ++ 
Sbjct: 19  SEWYVDLVQKAKLADYSDVKGCMVI-RPNGYALWENMQRVLDKMFKDLGHKNAYFPLLIP 77

Query: 302 QH-LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +  L +++ H + +   +  V  A  + K    + ++P +       F   ++SYR+LP+
Sbjct: 78  ESYLKKEAEHVEGFNPQLAVVTHAGGS-KLEEPYVIRPTSETIINRSFAKWIQSYRDLPL 136

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFG 419
            L ++ +V R E        +R   F   + H    T+E    E  ++  +  +  +D+ 
Sbjct: 137 LLNQWANVMRWEMR--TRLFLRTTEFLWQEGHTCHETEEDAEKETRQMLEVYRTFAEDYM 194

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
              +M    +  E+  G                                    A      
Sbjct: 195 AMPVMTGQKSESERFAG------------------------------------ALRTYSI 218

Query: 480 EYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           E +++D   +  Q GT   +  N    F+  +     +  H   + +  +G   R IG +
Sbjct: 219 EAMMQD--KKALQAGTSHNLGQNFAKAFDTQFQGRDGKMHH---VWQTSWGVSTRLIGGL 273

Query: 539 IENFKGN----LPLWLSPIQAIVTTITSSAVEYAQ--------EIANLLKSHHLSIETDF 586
           I     +    +P  L+    ++  I   A +  +         +A  L+   L +  D 
Sbjct: 274 IMTHSDDAGLIVPPKLAATHVVIIPIFGKASDAEKAQVLEKTNALAADLRKAGLGVVLDD 333

Query: 587 RN-ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
            + ++  +K  EH +    + I  G K+ ++ S  + R      + VSL +A+  
Sbjct: 334 DDTKSPGFKYNEHELIGTCLRIELGPKDLAKNSCVMVRRDVRQKEFVSLDEAVSK 388


>gi|191167053|ref|ZP_03028875.1| prolyl-tRNA synthetase [Escherichia coli B7A]
 gi|309796373|ref|ZP_07690782.1| prolyl-tRNA synthetase [Escherichia coli MS 145-7]
 gi|190902946|gb|EDV62673.1| prolyl-tRNA synthetase [Escherichia coli B7A]
 gi|308120077|gb|EFO57339.1| prolyl-tRNA synthetase [Escherichia coli MS 145-7]
          Length = 572

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 50/249 (20%), Positives = 99/249 (39%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGVRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E++ P V    LWQ+SG W+ Y   +       +     R F L P +    
Sbjct: 60  EMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGE-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHTSQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   G +   V+  T       S      A++    V+ +  +     I
Sbjct: 174 YDAMYAAYSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFSDTSDYAANI 233

Query: 464 NTGVLLGEG 472
                +   
Sbjct: 234 ELAEAIAPK 242



 Score = 86.8 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 59/178 (33%), Gaps = 13/178 (7%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
           P  +      I R  + G I Q+         A             ++    +G  + R 
Sbjct: 395 PSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDG---RNQILTMGCYGIGVTRV 451

Query: 535 IGIMIENFKGN----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDF 586
           +   IE          P  ++P Q  +  +         E A+++ + L++  + +  D 
Sbjct: 452 VAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLLDD 511

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R E       +  +  IP  I+ GD+      I  +   +   Q +   D +  L K+
Sbjct: 512 RKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVEYLVKQ 569


>gi|312131710|ref|YP_003999050.1| prolyl-tRNA synthetase [Leadbetterella byssophila DSM 17132]
 gi|311908256|gb|ADQ18697.1| prolyl-tRNA synthetase [Leadbetterella byssophila DSM 17132]
          Length = 490

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 66/434 (15%), Positives = 153/434 (35%), Gaps = 72/434 (16%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
            EE+    + +L +  +L   +     ++     G+ I++ +   +    K+  +     
Sbjct: 8   REENYSEWYNELVKRANLAENSAVRGCMVI-KPYGYAIWEKMQRALDDMFKETGHTNAYF 66

Query: 297 PQVLDQHLW-QQSGHWDSYRANMFAVKCA-------------DDTIKDLRTFALKPMNCP 342
           P  + +    +++ H + +      V                D   K      ++P +  
Sbjct: 67  PLFIPKSFLSKEASHVEGFAKECAVVTHYRLKNDPDGKGVVVDPEAKLEEELIVRPTSET 126

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMF 401
                + + ++S+R+LP+ + ++ +V R E        +R   F   + H    T+E+  
Sbjct: 127 VIWNSYKNWVQSHRDLPILINQWANVVRWEMR--TRLFLRTAEFLWQEGHTAHATREEAV 184

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            E  ++  +                                 AE  M   +   + ++ +
Sbjct: 185 AETNQMLEVYAKF-----------------------------AEEWMAVPVVRGRKTANE 215

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHP 520
           R         GA      E +++D  G+  Q GT   +  N    F+  + +   ++   
Sbjct: 216 RF-------AGADDTLCIEALMQD--GKALQAGTSHFLGQNFAKAFDVKFQDKTGKQE-- 264

Query: 521 VMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTIT------SSAVEYAQE 570
             +    +G   R +G +I    ++    LP  L+PIQ ++  I       ++  E  + 
Sbjct: 265 -FVWGTSWGVSTRLMGALIMAHSDDLGLVLPPKLAPIQVVIVPIYKGEEQLNAIFERMEP 323

Query: 571 IANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
               LK   +S++ D  +     +K  E+ +K +P+ I  G ++     + + R  + + 
Sbjct: 324 TIKSLKVQGISVKFDDDDSARPGWKFAEYELKGVPVRIAVGARDLENHQVEVARRDTLSK 383

Query: 630 QKVSLLDAIPILTK 643
           + VS+      L  
Sbjct: 384 ESVSMDGLDQYLIN 397


>gi|312877991|ref|ZP_07737931.1| prolyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
 gi|311795226|gb|EFR11615.1| prolyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
          Length = 572

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 44/212 (20%), Positives = 97/212 (45%), Gaps = 11/212 (5%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
           +        ++E   H+ + R   +  ++   SG+  +   G+++ + + + +R ++   
Sbjct: 8   MPTLKETPSDAEIESHKLMLRSGFMRQLS---SGIYVYLPLGYRVLRKIENIVREEMDRS 64

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
             +E++   ++ + LW++SG W  +   MF +K  ++     R + L P +      +  
Sbjct: 65  GAQEVHMSALMPKELWEESGRWAVFGPEMFRIKDRNE-----REYCLGPTHEEAFTYIVR 119

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIH 408
           + + SYR+LP  L +  + +R+E      G+MR R FT  DA+ F   E+  +    K++
Sbjct: 120 NEITSYRDLPKILYQIQTKFRDERRPRF-GVMRCREFTMKDAYSFDIDEKGLDISYQKMY 178

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           +  + I+K  G +  +V+  T       S   
Sbjct: 179 DAYVRIFKRCGLDVKIVEADTGAMGGASSHEF 210



 Score = 89.8 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/163 (20%), Positives = 65/163 (39%), Gaps = 11/163 (6%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G I  +       FN  Y +   EK   +M    +   I R    +IE       
Sbjct: 402 RGIEVGHIFKLGTKYTQAFNCVYTDEKGEKKLMIMGCYGI--GINRTAAAIIEQMHDEDG 459

Query: 546 --LPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              P+ ++P + I+  +     +  + A EI   L+ + + +  D R+E    K ++  +
Sbjct: 460 IIWPITVAPYEVIIVPVNVKDEAQNKIAFEIYENLQKNGVEVLIDDRDERAGVKFKDADL 519

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             IP  +  G K  SE  + IR   +  + +V + +A+  +  
Sbjct: 520 IGIPFRVTVGKK-VSEGKLEIRNRRTKESFEVEIDNAVEFIIN 561


>gi|300920118|ref|ZP_07136571.1| prolyl-tRNA synthetase [Escherichia coli MS 115-1]
 gi|300412852|gb|EFJ96162.1| prolyl-tRNA synthetase [Escherichia coli MS 115-1]
          Length = 572

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 50/249 (20%), Positives = 99/249 (39%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGVRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E++ P V    LWQ+SG W+ Y   +       +     R F L P +    
Sbjct: 60  EMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGE-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHTSQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   G +   V+  T       S      A++    V+ +  +     I
Sbjct: 174 YDAMYAAYSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFSDTSDYAANI 233

Query: 464 NTGVLLGEG 472
                +   
Sbjct: 234 ELAEAIAPK 242



 Score = 86.8 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 59/178 (33%), Gaps = 13/178 (7%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
           P  +      I R  + G I Q+         A             ++    +G  + R 
Sbjct: 395 PSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDG---RNQILTMGCYGIGVTRV 451

Query: 535 IGIMIENFKGN----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDF 586
           +   IE          P  ++P Q  +  +         E A+++ + L++  + +  D 
Sbjct: 452 VAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLLDD 511

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R E       +  +  IP  I+ GD+      I  +   +   Q +   D +  L K+
Sbjct: 512 RKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVEYLVKQ 569


>gi|260866343|ref|YP_003232745.1| prolyl-tRNA synthetase [Escherichia coli O111:H- str. 11128]
 gi|257762699|dbj|BAI34194.1| prolyl-tRNA synthetase [Escherichia coli O111:H- str. 11128]
          Length = 572

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 50/249 (20%), Positives = 99/249 (39%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGVRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E++ P V    LWQ+SG W+ Y   +       +     R F L P +    
Sbjct: 60  EMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGE-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHTSQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   G +   V+  T       S      A++    V+ +  +     I
Sbjct: 174 YDAMYAAYSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFSDTSDYAANI 233

Query: 464 NTGVLLGEG 472
                +   
Sbjct: 234 ELAEAIAPK 242



 Score = 87.5 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 31/178 (17%), Positives = 59/178 (33%), Gaps = 13/178 (7%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
           P  +      I R  + G I Q+         A             ++    +G  + R 
Sbjct: 395 PSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDG---RNQILTMGCYGIGVTRV 451

Query: 535 IGIMIENFKGN----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDF 586
           +   IE          P  ++P Q  +  +         E A+++ + L++  + +  D 
Sbjct: 452 VAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLLDD 511

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R E       +  +  IP  I+ GD+      I  +   +   Q +   D I  L K+
Sbjct: 512 RKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIIEYLVKQ 569


>gi|194435019|ref|ZP_03067260.1| prolyl-tRNA synthetase [Shigella dysenteriae 1012]
 gi|300902015|ref|ZP_07120042.1| prolyl-tRNA synthetase [Escherichia coli MS 84-1]
 gi|301305332|ref|ZP_07211428.1| prolyl-tRNA synthetase [Escherichia coli MS 124-1]
 gi|331651100|ref|ZP_08352128.1| proline--tRNA ligase [Escherichia coli M718]
 gi|331671699|ref|ZP_08372497.1| proline--tRNA ligase [Escherichia coli TA280]
 gi|194416755|gb|EDX32883.1| prolyl-tRNA synthetase [Shigella dysenteriae 1012]
 gi|300405901|gb|EFJ89439.1| prolyl-tRNA synthetase [Escherichia coli MS 84-1]
 gi|300839437|gb|EFK67197.1| prolyl-tRNA synthetase [Escherichia coli MS 124-1]
 gi|315254998|gb|EFU34966.1| prolyl-tRNA synthetase [Escherichia coli MS 85-1]
 gi|331051554|gb|EGI23603.1| proline--tRNA ligase [Escherichia coli M718]
 gi|331071544|gb|EGI42901.1| proline--tRNA ligase [Escherichia coli TA280]
 gi|332095137|gb|EGJ00169.1| prolyl-tRNA synthetase [Shigella boydii 5216-82]
 gi|332097597|gb|EGJ02574.1| prolyl-tRNA synthetase [Shigella dysenteriae 155-74]
          Length = 572

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 50/249 (20%), Positives = 99/249 (39%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGVRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E++ P V    LWQ+SG W+ Y   +       +     R F L P +    
Sbjct: 60  EMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGE-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHTSQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   G +   V+  T       S      A++    V+ +  +     I
Sbjct: 174 YDAMYAAYSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFSDTSDYAANI 233

Query: 464 NTGVLLGEG 472
                +   
Sbjct: 234 ELAEAIAPK 242



 Score = 86.8 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 59/178 (33%), Gaps = 13/178 (7%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
           P  +      I R  + G I Q+         A             ++    +G  + R 
Sbjct: 395 PSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDG---RNQILTMGCYGIGVTRV 451

Query: 535 IGIMIENFKGN----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDF 586
           +   IE          P  ++P Q  +  +         E A+++ + L++  + +  D 
Sbjct: 452 VAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLLDD 511

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R E       +  +  IP  I+ GD+      I  +   +   Q +   D +  L K+
Sbjct: 512 RKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVEYLVKQ 569


>gi|187933014|ref|YP_001884453.1| prolyl-tRNA synthetase [Clostridium botulinum B str. Eklund 17B]
 gi|226699132|sp|B2TIF5|SYP_CLOBB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|187721167|gb|ACD22388.1| proline--tRNA ligase [Clostridium botulinum B str. Eklund 17B]
          Length = 570

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 54/240 (22%), Positives = 101/240 (42%), Gaps = 11/240 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +   ++       E+E   H+ + R   +  +A   SG+  +   G K  + +   +R +
Sbjct: 4   SNMLISTLREVPAEAEIDSHKLMLRSGMIRKMA---SGIYNYMPLGLKALKKVEDIIREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           + +   +E     ++   LWQ SG WD+Y A MF VK  ++     R F L P +     
Sbjct: 61  MNEAGAQEFLASAMIPAELWQSSGRWDAYGAEMFRVKDRNE-----RDFCLGPTHEEVFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +  + +KSY++LPV L +  + YR+E      G+MR R F   DA+ F   +Q  +   
Sbjct: 116 DIAKNEIKSYKQLPVNLYQIQTKYRDERRPRF-GVMRSREFVMKDAYSFDKDQQGLDLSY 174

Query: 406 -KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            K++   + I+   G +   V+  +       S      +E     ++   + +    I 
Sbjct: 175 NKMYEAYVKIFNRCGLDAKCVEADSGAIGGSNSAEFMVKSEVGEDDIVFCTECNYAANIE 234



 Score = 77.5 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 33/168 (19%), Positives = 61/168 (36%), Gaps = 10/168 (5%)

Query: 484 KDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           K  I R  + G I  +        +A ++  +  K  P ++     G       I+ ++ 
Sbjct: 397 KLTISRGTEVGHIFKLGTKYSEAMDAKFIAENG-KEAPFIMGCYGIGVTRTMASIIEQHN 455

Query: 543 KGNLPLWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
             N  +W    +P    V  +       V+ A ++   LKS  +    D RNE    K +
Sbjct: 456 DENGIVWPLAVAPYHVSVIAVNVKDEEQVKIATKLYEDLKSMGVEALLDDRNERAGVKFK 515

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  I  IP+ I  G K   +  +  +       + V + D   ++  E
Sbjct: 516 DSEIMGIPMRITVGKK-IVDGEVEFKLR-IGDMEVVKIEDVCQMVKGE 561


>gi|114152266|sp|Q2LTR7|SYP_SYNAS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
          Length = 578

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 45/220 (20%), Positives = 87/220 (39%), Gaps = 11/220 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  L        ++E   H+ + R   +  ++    G+  +   G+++ + +   +R +
Sbjct: 4   SEMFLPTEREIPSDAEVVSHQLMLRAGMIRKLSA---GIYSYLPLGYRVLRKVEQIIREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E+  P V    LWQ+SG W+ Y   +   +   D     R + L P +     
Sbjct: 61  MNRAGAQEVYLPMVQPAELWQESGRWEHYGKELLRFRDRHD-----REYCLGPTHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +  H +K+YR+LP  L +  + +R+E      G+MR R F   DA+ F   E+      
Sbjct: 116 DLVRHEIKTYRQLPKNLYQIQTKFRDEIRPRF-GVMRGREFGMKDAYSFDADEEGAEISY 174

Query: 406 -KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
            K+      I+   G     V+  +       S      A
Sbjct: 175 QKMFEAYKRIFARCGLRFRPVEADSGTIGGSFSHEFMVMA 214



 Score = 85.2 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 60/161 (37%), Gaps = 6/161 (3%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPL 548
           R  + G +       S+         + K   +++     G+       + +N   N  +
Sbjct: 405 RGIEVGHVFKLGTKYSKAMGASYLDKNGKEQIMIMGCYGIGTGRTVAACIEQNHDENGIV 464

Query: 549 WLSPI---QAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
           W  PI   Q I+T +     +  E A+ +   L      +  D R+E    K ++  +  
Sbjct: 465 WPMPISPYQVIITPVNMNDKALAETAERLYESLAGKGAEVLLDDRDERAGVKFKDADLIG 524

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           IPI +  G K+ +E  + +R   +  T  V +     ++ +
Sbjct: 525 IPIRVTVGPKKLAEGKVEVRLRDTGETSDVQVDSVEKMILR 565


>gi|302542211|ref|ZP_07294553.1| proline-tRNA ligase [Streptomyces hygroscopicus ATCC 53653]
 gi|302459829|gb|EFL22922.1| proline-tRNA ligase [Streptomyces himastatinicus ATCC 53653]
          Length = 471

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 63/415 (15%), Positives = 156/415 (37%), Gaps = 56/415 (13%)

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
            R ++ +  + +L         ++     G+ +++ +   +  +IK    +    P  + 
Sbjct: 15  PRWYQDVINKAELAENGPVRGTMVI-RPYGYGLWERMQGDLDARIKAVGVQNAYFPLFIP 73

Query: 302 QHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           Q    +++ H + +   +  V        +     ++P +       F+  ++SYR+LP+
Sbjct: 74  QSYLTREAEHVEGFAPELAVVTHGGGKELE-EPVVVRPTSETIVNEYFSKWVQSYRDLPL 132

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
            + ++ +V R E    L   +R   F   + H                            
Sbjct: 133 LINQWANVVRWELRPRL--FLRTTEFLWQEGHTAHAT----------------------- 167

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
                + +     R+  D   D  EN++   +   + ++++R         GA      E
Sbjct: 168 ----YEDAREFAARIHRDVYADFMENVLAMDVVLGRKTARERF-------AGAVNTLTLE 216

Query: 481 YILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
            ++ D  G+  Q GT   +  N    FN  Y++   E+    ++ +  +GS  R +G ++
Sbjct: 217 GMMGD--GKALQLGTSHELGQNFARAFNTRYLSRDGEQE---LVWQTSWGSTTRMVGALV 271

Query: 540 ----ENFKGNLPLWLSPIQAIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNE-TIN 592
               ++    LP  L+P+QA+V  +    + +   +E  + L +  + ++ D R +    
Sbjct: 272 MMHGDDDGLRLPPRLAPVQAVVLAVKGDDAVLAAVRETGDRLAAAGVRVQVDDRTDMPFG 331

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRF---GSTTTQKVSLLDAIPILTKE 644
            +  +  ++ +P+ +  G ++    +  + R    G    +   + + +P   +E
Sbjct: 332 RRAVDWELRGVPVRVEIGPRDLEAGTATLARRIPGGKEPVRTDLVAETVPKALEE 386


>gi|51597293|ref|YP_071484.1| prolyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
 gi|186896398|ref|YP_001873510.1| prolyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
 gi|81825738|sp|Q667L4|SYP_YERPS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226701360|sp|B2JZ09|SYP_YERPB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|51590575|emb|CAH22216.1| prolyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
 gi|186699424|gb|ACC90053.1| prolyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
          Length = 572

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 52/259 (20%), Positives = 98/259 (37%), Gaps = 15/259 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTQKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGVRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E++ P V    LWQ+SG W+ Y   +       +     R F L P +    
Sbjct: 60  EMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGE-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLIRGEINSYKQLPLNFFQIQTKFRDELRPRF-GVMRAREFLMKDAYSFHTTQESLQET 173

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG---SDALWDDAENIMKGVLDTIKNSSQD 461
                   S  K F    +  +        +G   S      AE+    ++ +  +    
Sbjct: 174 YDAMYTAYS--KIFSRMDLNFRAVLADTGSIGGSASHEFQVLAESGEDDIVFSTGSDYAA 231

Query: 462 RINTGVLLGEGAFYGPKFE 480
            I     L       P  E
Sbjct: 232 NIEFAEALAPTEPRAPATE 250



 Score = 85.6 bits (210), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 56/168 (33%), Gaps = 13/168 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           I R  + G I Q+         A             ++    +G  + R +   IE    
Sbjct: 405 IKRGIEVGHIFQLGTKYSEAMKATVQGEDG---RNQVMTMGCYGIGVSRVVAAAIEQNHD 461

Query: 545 N----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +     P  ++P Q  +  +         E A+E+   L+SH + +  D R E       
Sbjct: 462 DRGIIWPDAIAPFQVAILPMNMHKSFRVKELAEELYTTLRSHGIDVILDDRKERPGVMFA 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  +  +P  I+ GD+      +  +       Q +   + +  L  +
Sbjct: 522 DMELIGVPHNIVIGDRNLDSEEVEYKNRRVGEKQMIKTSEIVEFLLSQ 569


>gi|312623109|ref|YP_004024722.1| prolyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002]
 gi|312203576|gb|ADQ46903.1| prolyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002]
          Length = 572

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 50/262 (19%), Positives = 107/262 (40%), Gaps = 22/262 (8%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-D 289
           +        ++E   H+ + R   +  ++   SG+  +   G+++ + + + +R ++   
Sbjct: 8   MPTLKETPSDAEIESHKLMLRSGFMRQLS---SGIYVYLPLGYRVLRKIENIVREEMDKS 64

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
             +E++   ++ + LW++SG W  +   MF VK  ++     R + L P +      +  
Sbjct: 65  GAQEVHMSALMPKELWEESGRWAVFGPEMFRVKDRNE-----REYCLGPTHEEAFTYIVR 119

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIH 408
           + + SYR+LP  L +  + +R+E      G+MR R FT  DA+ F   E+  +    K++
Sbjct: 120 NEISSYRDLPKILYQIQTKFRDERRPRF-GVMRCREFTMKDAYSFDVDEKGLDISYKKMY 178

Query: 409 NLIISIYKDFGFEKIMVK-----------LSTRPEKRVGSDALWDDAENIMKGVLDTIKN 457
           +  + I+K  G +  +V+                   VG   +           L+  + 
Sbjct: 179 DAYVRIFKRCGLDVKIVEADTGAMGGASSHEFMVPSSVGEAEIAYCKACGYAANLEKAEC 238

Query: 458 SSQDRINTGVLLGEGAFYGPKF 479
             +   N   L  +   Y P  
Sbjct: 239 LDEPIENNEELKEKQEVYTPNV 260



 Score = 87.9 bits (216), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 64/163 (39%), Gaps = 11/163 (6%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G I  +       FN  Y +   EK   +M    +   I R    +IE       
Sbjct: 402 RGIEVGHIFKLGTKYTQAFNCVYTDEKGEKKLMIMGCYGI--GINRTAAAIIEQMHDEDG 459

Query: 546 --LPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              P+ ++P + I+  +     +    A EI   L+ + + +  D R+E    K ++  +
Sbjct: 460 IIWPITVAPYEVIIVPVNVKDENQNRIAFEIYENLQRNGVEVLIDDRDERAGVKFKDADL 519

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             IP  +  G K  SE  + IR   +  + +V +  AI ++  
Sbjct: 520 IGIPFRVTVGKK-ISEGKLEIRNRRTKESFEVEIEKAIEVVIN 561


>gi|293394735|ref|ZP_06639027.1| proline-tRNA ligase [Serratia odorifera DSM 4582]
 gi|291422861|gb|EFE96098.1| proline-tRNA ligase [Serratia odorifera DSM 4582]
          Length = 572

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 61/385 (15%), Positives = 126/385 (32%), Gaps = 46/385 (11%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGLRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ + +  E++ P V    LWQ+SG W+ Y   +       +     R F L P +    
Sbjct: 60  EMNNANAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGE-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + + SY++LP+   +  + +R+E      G+MR R F   D++ F T ++     
Sbjct: 115 TDLIRNEISSYKQLPLNFFQIQTKFRDEVRPRF-GVMRSREFLMKDSYSFHTTQESLQAT 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   G +   V+  T       S      A +    ++ +  +     I
Sbjct: 174 YDAMYQAYSKIFSRMGLDFRPVQADTGSIGGSASHEFQVLAASGEDDIVFSTGSDYAANI 233

Query: 464 NTGVLLGEGAFYGPKFEY-----------------ILKDAIGRDWQCGTIQVDFNLPSRF 506
                +          E                    +  + +  +   +        + 
Sbjct: 234 ELAEAVAPAQPRAAATEELRVVDTPNAKTIADLVDQFQLPVEKTVKTLLVHATEESGHKL 293

Query: 507 NAFYVNSHSE------KCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTI 560
            A  V    E      +  P +     F S E    I+     G  P  L PI   +  +
Sbjct: 294 VALLVRGDHELNEIKAEKLPQVAAPLTFASEEEIRAIV-----GAGPGSLGPINMPIPVV 348

Query: 561 TSSAVEYAQEIANLLKSHHLSIETD 585
              +          +         D
Sbjct: 349 IDRS-------VAAMSDFGAGANVD 366



 Score = 84.1 bits (206), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 56/168 (33%), Gaps = 13/168 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           I R  + G I Q+         A             +++   +G  + R +   IE    
Sbjct: 405 IKRGIEVGHIFQLGTKYSEAMKATVQGEDG---RNQLLNMGCYGIGVTRVVAAAIEQNHD 461

Query: 545 N----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +     P  ++P    +  +         E A+++   L+SH + +  D R E       
Sbjct: 462 DRGIIWPDAIAPFHVAILPMNMHKSFRVQELAEKLYAELRSHGIDVILDDRKERPGVMFA 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  +  +P  I+ GD+      I  +       Q +   D +  L  +
Sbjct: 522 DMELIGVPHSIVIGDRNLDSDEIEYKNRRVGEKQMIKTGDIVEYLLAQ 569


>gi|322490369|emb|CBZ25629.1| putative bifunctional aminoacyl-tRNA synthetase [Leishmania
           mexicana MHOM/GT/2001/U1103]
          Length = 727

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 75/392 (19%), Positives = 148/392 (37%), Gaps = 59/392 (15%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ-HLWQQSGHWDSYRAN 317
            D SG        + +++ +  ++  KI+    E+   P  + +  L ++  H + +   
Sbjct: 246 YDVSGCYIIRPWAYYVWKCVQRFLGGKIERLGVEDCYFPMFVSRSCLEREKDHIEGFAPE 305

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           +  V  A DT  + +  A++P +       +   ++S+R+LPVRL  + +V R E S   
Sbjct: 306 VAWVTRAGDTELE-QPVAVRPTSETVMYPYYAKWIRSHRDLPVRLNMWNNVIRWEFSHPT 364

Query: 378 HGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
              +R R F   + H  +   E+   E L I     S+Y+      ++    T  EK  G
Sbjct: 365 -PFIRTREFLWQEGHCAWAKAEECAKEVLDILECYASVYEQLLAVPVVRGRKTEKEKFAG 423

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
                                                 Y    E  ++ A+GR  Q  T 
Sbjct: 424 G------------------------------------HYTTTVETFIE-AVGRGCQGATS 446

Query: 497 Q-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLS 551
             +  N    F+  + +  + +   ++  +  +G   R IG+MI    +N    +P  ++
Sbjct: 447 HNLGQNFGKMFDIRFQDPENNEQT-LIPWQNSWGLSTRVIGVMIMVHGDNRGMVMPPRVA 505

Query: 552 PIQAIVTT--ITSSAVEYAQE--------IANLLKSHHLSIETDFRNE-TINYKIREHSI 600
             Q I+    IT    E A++        + + L    +  + D R+  +  ++     +
Sbjct: 506 STQVIIIPVGITKDTTEEARQGLLASCRRLESELCEGGVRAKCDLRDNYSPGWRFNHWEV 565

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
           K +P+ +  G +E +ERS+ +    S     V
Sbjct: 566 KGVPLRVELGPRELAERSLAVAVRHSGARHSV 597


>gi|147677598|ref|YP_001211813.1| prolyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
 gi|189083504|sp|A5D2U6|SYP_PELTS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|146273695|dbj|BAF59444.1| prolyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
          Length = 570

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 53/229 (23%), Positives = 91/229 (39%), Gaps = 11/229 (4%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E   H+ L R      I    +GV  +     ++ + +   +R ++     +E+  P 
Sbjct: 17  EAEVVSHQLLLRAG---FIRRAAAGVYTYLPLAMRVIKKIEQIVREEMDRQGGQELLMPI 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    +WQ+SG WD Y   +F +K   D     R FAL P +      +    + SY++L
Sbjct: 74  IQPAEIWQESGRWDVYGPELFRLKDRHD-----RDFALGPTHEEIITVLVRGEVSSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKD 417
           P+ L +  + YR+E      GLMR R F   D + F   E+  N    K++     +++ 
Sbjct: 129 PLLLYQIQNKYRDERRPRF-GLMRGREFIMKDLYSFDRDEEGLNVSYMKMYEAYTRVFQR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
            G     V+  +       +      AE+    VL    N      N  
Sbjct: 188 CGLHFRPVEADSGAIGGSDTHEFMVLAESGEATVLYCDGNGCDYAANVE 236



 Score = 94.5 bits (233), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 35/178 (19%), Positives = 64/178 (35%), Gaps = 11/178 (6%)

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
            P+    LK+A G +   G I    +  SR           +  PV++     G      
Sbjct: 394 CPRCGAGLKEAKGIE--VGQIFKLGDKYSRALGASYLDEKGQSRPVIMGCYGIGITRTMA 451

Query: 536 GIMIENFKGNLPLWLS---PIQAIVTTITSS---AVEYAQEIANLLKSHHLSIETDFRNE 589
             + +N   +  +W +   P   +V  +          A+E+ + L +  +    D R E
Sbjct: 452 AAIEQNHDRDGIIWPASIAPFHVVVIPVNVKDGGQYAMAEEVYSRLWAAGIEAVLDDRTE 511

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS---LLDAIPILTKE 644
               K ++  +   P+ I  G K   E+ + IR   +  T  V    L + +  + KE
Sbjct: 512 RAGVKFKDADLIGYPLRITIGAKAVEEKLVEIRIRKNGETVFVPMNELEEKVEDMLKE 569


>gi|294645076|ref|ZP_06722802.1| proline--tRNA ligase [Bacteroides ovatus SD CC 2a]
 gi|292639582|gb|EFF57874.1| proline--tRNA ligase [Bacteroides ovatus SD CC 2a]
          Length = 447

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 55/335 (16%), Positives = 125/335 (37%), Gaps = 57/335 (17%)

Query: 325 DDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVR 384
           D   K      ++P +       + + ++SYR+LP+   ++ +V+R E        +R  
Sbjct: 62  DPAAKLEEELIIRPTSETIIWNTYKNWIQSYRDLPILCNQWANVFRWEMR--TRLFLRTA 119

Query: 385 GFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
            F   + H   T      E  +    ++++Y +F                          
Sbjct: 120 EFLWQEGH---TAHATREEAEEEAIRMLNVYGEF-------------------------- 150

Query: 445 ENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLP 503
                     +       + +      GA      E +++D  G+  Q GT   +  N  
Sbjct: 151 ------AEKYMAVPVVKGVKSANERFAGALDTYTIEAMMQD--GKALQSGTSHFLGQNFA 202

Query: 504 SRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTT 559
             F+  +VN  ++  +   +    +G   R +G +I    ++    LP  L+PIQ ++  
Sbjct: 203 KAFDVQFVNKENKLEY---VWATSWGVSTRLMGALIMTHSDDNGLVLPPHLAPIQVVIVP 259

Query: 560 ITSSAVEY------AQEIANLLKSHHLSIETDF-RNETINYKIREHSIKKIPIIIICGDK 612
           I  +  +        + I   LK+  +S++ D   N+   +K  ++ +K +P+ ++ G +
Sbjct: 260 IYKNDEQLKQIDAKVEGIVAKLKALGISVKYDNADNKRPGFKFADYELKGVPVRLVMGGR 319

Query: 613 EASERSIGIRRFGSTTTQKVS---LLDAIPILTKE 644
           +    ++ + R  +   + V+   +   +  L +E
Sbjct: 320 DLENNTMEVMRRDTLEKETVTCEGIETYVQNLLEE 354


>gi|145507630|ref|XP_001439770.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124406965|emb|CAK72373.1| unnamed protein product [Paramecium tetraurelia]
          Length = 698

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 69/412 (16%), Positives = 145/412 (35%), Gaps = 62/412 (15%)

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-----RKIKDDYEEINTP 297
              ++++ R+ +L     D SG        + I++ +  Y        ++++ Y  +   
Sbjct: 213 SEWYQQVIRKAELIEY-YDVSGCYILRPWAYFIWEQIQRYFDDLIRTEEVENTYFPMFLS 271

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
               +HL ++  H + ++A +  V    ++       A++P +       F   ++S+R+
Sbjct: 272 A---KHLNKEKEHVEGFKAEVAWVTKYGESDL-NEPLAIRPTSETIMYPAFAKWVQSHRD 327

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYK 416
           LP+++ ++ ++ R E        +R R F   + H    T+E+   +   I +    +Y 
Sbjct: 328 LPLKVNQWTNIVRWEFKFPT-PFIRTREFLWQEGHTAHSTREEAVKQVYTILDFYEQVYG 386

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           +     ++  + T  EK  G D                                    + 
Sbjct: 387 ELLAVPVIKGIKTESEKFAGGD------------------------------------FT 410

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
              E I+    GR  Q  T        S+   F +N   +K       +  +G   R IG
Sbjct: 411 TTVETIIP-QNGRGLQGATSHHLGQNFSK--MFEINFEDDKKQKAFAWQTSWGLTTRSIG 467

Query: 537 IMIENFKGNLPLWLSPI----QAIVTTITSSAV------EYAQEIANLLKSHHLSIETDF 586
            MI     +  L L P     Q ++  I    +      E  ++I  LL    L +  D 
Sbjct: 468 AMIMFHGDDKGLVLPPRIAKYQIVIIPIIHKDLDEQQLNERCEQIRQLLVKQKLRVHLDS 527

Query: 587 RNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
           R+  +  +K  +   K +PI +  G  E     + + +       ++ + + 
Sbjct: 528 RDNYSPGWKFNKWEQKGVPIRLEIGPGEFKNNEVRVVQRFDNKKYQIKMEEL 579


>gi|85059898|ref|YP_455600.1| prolyl-tRNA synthetase [Sodalis glossinidius str. 'morsitans']
 gi|114152253|sp|Q2NRN0|SYP_SODGM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|84780418|dbj|BAE75195.1| prolyl-tRNA synthase [Sodalis glossinidius str. 'morsitans']
          Length = 574

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 48/241 (19%), Positives = 93/241 (38%), Gaps = 11/241 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTLKEVPADAEVVSHQLMLRAGMIRKLA---SGLYSWLPTGLRVLRKVENIVRE 59

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E++ P V    LWQ+SG W  Y   +             R F L P +    
Sbjct: 60  EMDNAGAIEVSMPVVQPADLWQESGRWVQYGPELLRFTDRG-----ARAFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + + SY++LP+   +  + +R+E      G+MR R F   DA+ F T +      
Sbjct: 115 TDLIRNEVSSYKQLPLNFYQIQTKFRDEVRPRF-GVMRSREFVMKDAYSFHTSQASLQAT 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++    +I+   G E   V+  T       S      A +    ++ +  +     I
Sbjct: 174 YDAMYQAYSAIFTRMGLEFRAVQADTGSIGGSASHEFQVLAGSGEDDIVFSTASDYAANI 233

Query: 464 N 464
            
Sbjct: 234 E 234



 Score = 87.9 bits (216), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 26/166 (15%), Positives = 53/166 (31%), Gaps = 9/166 (5%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           I R  + G I Q+         A            + +     G     +  + +N    
Sbjct: 405 IKRGIEVGHIFQLGTKYSEAMKATVQGEDGRNQT-LTMGCYGIGITRVVVAAIEQNHDDR 463

Query: 546 LPLW---LSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
             LW   L+P    +  +         E A+++   L++  + +  D R E       + 
Sbjct: 464 GILWPETLAPFNVAILPMNMHKSFRVKEVAEDLYQQLQARGIDVLLDDRKERPGVMFADM 523

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            +  +P  ++ GD+      I  +   S   + + L   +  L  E
Sbjct: 524 ELIGVPHQLVIGDRNLDTEEIEYKNRRSGEKRMIKLSAIVDFLVSE 569


>gi|225552331|ref|ZP_03773271.1| prolyl-tRNA synthetase [Borrelia sp. SV1]
 gi|225371329|gb|EEH00759.1| prolyl-tRNA synthetase [Borrelia sp. SV1]
          Length = 488

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 76/432 (17%), Positives = 158/432 (36%), Gaps = 63/432 (14%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
           ++ ++   ++   + +  + ++  L   +     ++     G+ I+  + S + +K K+ 
Sbjct: 1   MSDFIASKKDDYSKWYLDIVQKAKLADYSPVKGCMVI-MPYGYSIWSKIQSILDKKFKET 59

Query: 290 DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
            +E    P ++     + +  H D +      +K A           L+P +      ++
Sbjct: 60  GHENAYFPMLIPYSFLEREKDHVDGFSPEFAIIKDAGGESL-AEPLVLRPTSETIIWNMY 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
           +  +KSYR+LP+++ ++ +V R E        +R   F   + H   T      E L+  
Sbjct: 119 SKWIKSYRDLPLKINQWANVVRWEKR--TRPFLRTTEFLWQEGH---TAHATEEEALEET 173

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
            LI+ +YK F                          E  +   +   K S +++      
Sbjct: 174 LLILDVYKRF-------------------------IEEYLAIPVFCGKKSEKEKF----- 203

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAV 527
              GA      E +++D   +  Q  T      N    F+  + +   +  H   +  + 
Sbjct: 204 --AGAVSTYSIEALMQD--KKALQAATSHYLGLNFAKAFDVKFQDKDGKMRH---VFASS 256

Query: 528 FGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTT-------ITSSAVEYAQEIANLLK 576
           +G   R IG +I    +     LP  ++PI+ IV         I    ++Y+  + + LK
Sbjct: 257 WGVSTRLIGALIMVHSDEKGLVLPPRIAPIEIIVIPIFKKEDEINKKILDYSDCVVDTLK 316

Query: 577 SHHLSIET--DFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT--TQKV 632
                +E   D RN +  ++      K IPI +  G  +    S+ I R         ++
Sbjct: 317 KAEFRVEIDKDIRN-SPGFRFSSAEFKGIPIRLEVGINDVLLNSVTISRRDKDRKFKYQI 375

Query: 633 SLLDAIPILTKE 644
           SL   +  +  E
Sbjct: 376 SLDSLVSKVKVE 387


>gi|188587611|ref|YP_001919651.1| prolyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43]
 gi|226699131|sp|B2UY89|SYP_CLOBA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|188497892|gb|ACD51028.1| prolyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43]
          Length = 570

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 54/240 (22%), Positives = 100/240 (41%), Gaps = 11/240 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +   ++       E+E   H+ + R   +  +A   SG+  +   G K  + +   +R +
Sbjct: 4   SNMLISTLREVPAEAEIDSHKLMLRSGMIRKMA---SGIYNYMPLGLKALKKVEDIIREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           + +   +E     ++   LWQ SG WD+Y A MF VK  ++     R F L P +     
Sbjct: 61  MNEAGAQEFLASAMIPAELWQSSGRWDAYGAEMFRVKDRNE-----RDFCLGPTHEEVFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +  + +KSY++LPV L +  + YR+E      G+MR R F   DA+ F   +Q  +   
Sbjct: 116 DIAKNEIKSYKQLPVNLYQIQTKYRDERRPRF-GVMRSREFVMKDAYSFDKDQQGLDLSY 174

Query: 406 -KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            K++   + I+   G +   V+  +       S      +E     ++   +      I 
Sbjct: 175 NKMYEAYVKIFNRCGLDAKCVEADSGAIGGSNSAEFMVKSEVGEDDIVFCTECDYAANIE 234



 Score = 79.1 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/169 (21%), Positives = 63/169 (37%), Gaps = 12/169 (7%)

Query: 484 KDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           K  I R  + G I  +        +A ++  +  K  P ++     G   R +  +IE  
Sbjct: 397 KLTISRGTEVGHIFKLGTKYSEAMDAKFIAENG-KEAPFIMGCYGIGVT-RTMASIIEQH 454

Query: 543 KGN----LPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
                   PL ++P    V  +       V+ A ++   LKS  +    D RNE    K 
Sbjct: 455 NDESGIVWPLAVAPYHVSVIAVNVKDEEQVKIATKLYEDLKSIGVEALLDDRNERAGVKF 514

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           ++  I  IP+ I  G K   +  +  +   +   + V + D   I+  E
Sbjct: 515 KDSEIMGIPMRITVGKK-IVDGEVEFKLR-TGDMEVVKIEDVCQIVKGE 561


>gi|312149307|gb|ADQ29378.1| prolyl-tRNA synthetase [Borrelia burgdorferi N40]
          Length = 488

 Score =  149 bits (376), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 75/431 (17%), Positives = 157/431 (36%), Gaps = 61/431 (14%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
           ++ ++   E+   + +  + ++  L   +     ++     G+ I+  + S + +K K+ 
Sbjct: 1   MSDFIASKEDDYSKWYLDIVQKAKLADYSPVKGCMVI-MPYGYSIWSKIQSILDKKFKET 59

Query: 290 DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
            +E    P ++     + +  H D +      +K A           L+P +      ++
Sbjct: 60  GHENAYFPMLIPYSFLEREKDHIDGFSPEFAIIKDAGGESL-AEPLVLRPTSETIIWNMY 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
           +  +KSYR+LP+++ ++ +V R E        +R   F   + H   T      E L+  
Sbjct: 119 SKWIKSYRDLPLKINQWANVVRWEKR--TRPFLRTTEFLWQEGH---TAHATEEEALEET 173

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
            LI+ +YK F                          E+ +   +   K S +++      
Sbjct: 174 LLILDVYKRF-------------------------IEDYLAIPVFCGKKSEKEKF----- 203

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAV 527
              GA      E +++D   +  Q  T      N    F+  + +   +  H   +  + 
Sbjct: 204 --AGAVSTYSIEALMQD--KKALQAATSHYLGLNFAKAFDVKFQDKDGKMRH---VFASS 256

Query: 528 FGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTT-------ITSSAVEYAQEIANLLK 576
           +G   R IG +I    +     LP  ++PI+ IV         I    ++Y+  + + LK
Sbjct: 257 WGVSTRLIGALIMVHSDEKGLVLPPRIAPIEIIVIPIFKKGDEINKKILDYSDCVVDTLK 316

Query: 577 SHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT--TQKVS 633
                +E D     +  ++      K IPI +  G  +    S+ I R         ++S
Sbjct: 317 KAEFRVEIDKDVRSSPGFRFSSAEFKGIPIRLEVGINDVLLNSVTISRRDKDRKFKYQIS 376

Query: 634 LLDAIPILTKE 644
           L   +  +  E
Sbjct: 377 LDSLVSKVKVE 387


>gi|251778178|ref|ZP_04821098.1| proline--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
 gi|243082493|gb|EES48383.1| proline--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
          Length = 570

 Score =  149 bits (376), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 54/240 (22%), Positives = 100/240 (41%), Gaps = 11/240 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +   ++       E+E   H+ + R   +  +A   SG+  +   G K  + +   +R +
Sbjct: 4   SNMLISTLREVPAEAEIDSHKLMLRSGMIRKMA---SGIYNYMPLGLKALKKVEDIIREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           + +   +E     ++   LWQ SG WD+Y A MF VK  ++     R F L P +     
Sbjct: 61  MNEAGAQEFLASAMIPAELWQSSGRWDAYGAEMFRVKDRNE-----RDFCLGPTHEEVFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +  + +KSY++LPV L +  + YR+E      G+MR R F   DA+ F   +Q  +   
Sbjct: 116 DIAKNEIKSYKQLPVNLYQIQTKYRDERRPRF-GVMRSREFVMKDAYSFDKDQQGLDLSY 174

Query: 406 -KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            K++   + I+   G +   V+  +       S      +E     ++   +      I 
Sbjct: 175 NKMYEAYVKIFNRCGLDAKCVEADSGAIGGSNSAEFMVKSEVGEDDIVFCTECDYAANIE 234



 Score = 79.1 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/169 (21%), Positives = 63/169 (37%), Gaps = 12/169 (7%)

Query: 484 KDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           K  I R  + G I  +        +A ++  +  K  P ++     G   R +  +IE  
Sbjct: 397 KLTISRGTEVGHIFKLGTKYSEAMDAKFIAENG-KEAPFIMGCYGIGVT-RTMASIIEQH 454

Query: 543 KGN----LPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
                   PL ++P    V  +       V+ A ++   LKS  +    D RNE    K 
Sbjct: 455 NDESGIVWPLAVAPYHVSVIAVNVKDEEQVKIATKLYEDLKSIGVEALLDDRNERAGVKF 514

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           ++  I  IP+ I  G K   +  +  +   +   + V + D   I+  E
Sbjct: 515 KDSEIMGIPMRITVGKK-IVDGEVEFKLR-TGDMEVVKIEDVCQIVKGE 561


>gi|157156008|ref|YP_001461365.1| prolyl-tRNA synthetase [Escherichia coli E24377A]
 gi|166980119|sp|A7ZHT6|SYP_ECO24 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|157078038|gb|ABV17746.1| prolyl-tRNA synthetase [Escherichia coli E24377A]
          Length = 572

 Score =  149 bits (376), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 50/249 (20%), Positives = 99/249 (39%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGVRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E++ P V    LWQ+SG W+ Y   +       +     R F L P +    
Sbjct: 60  EMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGE-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHTSQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   G +   V+  T       S      A++    V+ +  +     I
Sbjct: 174 YDAMYAAYSKIFSRIGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFSDTSDYAANI 233

Query: 464 NTGVLLGEG 472
                +   
Sbjct: 234 ELAEAIAPK 242



 Score = 86.8 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 59/178 (33%), Gaps = 13/178 (7%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
           P  +      I R  + G I Q+         A             ++    +G  + R 
Sbjct: 395 PSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDG---RNQILTMGCYGIGVTRV 451

Query: 535 IGIMIENFKGN----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDF 586
           +   IE          P  ++P Q  +  +         E A+++ + L++  + +  D 
Sbjct: 452 VAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLLDD 511

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R E       +  +  IP  I+ GD+      I  +   +   Q +   D +  L K+
Sbjct: 512 RKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVEYLVKQ 569


>gi|330720665|gb|EGG98912.1| Prolyl-tRNA synthetase [gamma proteobacterium IMCC2047]
          Length = 576

 Score =  149 bits (376), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 46/250 (18%), Positives = 91/250 (36%), Gaps = 11/250 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            TQ  +        ++    H+ + R   +  +A    G+  W   G ++ +   + +R 
Sbjct: 3   ATQFPINTLKESPADAAVISHKLMLRAGMIRRLAA---GLYTWSPLGLRVLRKSENIIRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LW+++G W  +   +  VK      +  R F + P +    
Sbjct: 60  EMNRAGALELLMPAVQPAELWEETGRWGQFGDELLRVKD-----RHGREFCIGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
             +  + L SY++LPV   +  + +R+E      G+MR R F   DA+ F    E +   
Sbjct: 115 TDLARNELSSYKQLPVNFYQIQTKFRDERRPRF-GVMRSREFLMKDAYSFHLDAESLQQT 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     +++  G     V   +       S      AE+    +  +  +     I
Sbjct: 174 YDAMYRAYCRVFERMGLVFRAVDADSGSIGGSQSQEFHVLAESGEDLIAFSDSSDYAANI 233

Query: 464 NTGVLLGEGA 473
            T   L    
Sbjct: 234 ETAEALAPDF 243



 Score = 82.9 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 35/172 (20%), Positives = 64/172 (37%), Gaps = 15/172 (8%)

Query: 484 KDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE- 540
           K    R  + G I Q+     +  NA  +   +EK    ++    +G  + R +   IE 
Sbjct: 404 KLVFKRGIEVGHIFQLGQKYAAAMNATVL---NEKGQAQVMTMGCYGIGVTRVVAAAIEQ 460

Query: 541 NFKGNLPLW---LSPIQAIVTTITSSAVEYAQE----IANLLKSHHLSIETDFRNET--I 591
           N   N  +W   L+P Q  +  +     E  +E    +   LK   + +  D R++    
Sbjct: 461 NNDDNGIIWPAGLAPFQVGIVPMNYDKSEQVKETANRVYQELKELGIDVYMDDRDKKTSP 520

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             K  +  +  IP  I+  D+   E  I  +   S   Q ++    I  + +
Sbjct: 521 GVKFADMDLIGIPHRIVISDRGLKENQIEYQERRSQERQNLAADQVIAFIKE 572


>gi|317493988|ref|ZP_07952404.1| prolyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316917761|gb|EFV39104.1| prolyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 572

 Score =  149 bits (376), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 57/284 (20%), Positives = 111/284 (39%), Gaps = 15/284 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWMPTGLRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E++ P V    LWQ+SG W+ Y   +       +     R F L P +    
Sbjct: 60  EMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGE-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + + SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDMVRNEISSYKQLPLNFFQIQTKFRDEVRPRF-GVMRSREFVMKDAYSFHTSQESLQET 173

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
                +  +  K F    +  +        +G +A  +  + + +   D +  SS+    
Sbjct: 174 YD--KMFAAYSKIFSRMDLDFRPVQADTGSIGGNASHE-FQVLAQSGEDDVVFSSESDFA 230

Query: 465 TGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
             + L E     PK E        R       +    L  +FN 
Sbjct: 231 ANIELAEAV--APKGERAAPTEELRIVDTPNAKTIAELTEQFNL 272



 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 26/165 (15%), Positives = 54/165 (32%), Gaps = 16/165 (9%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           I R  + G I Q+         A             ++    +G  + R +   IE    
Sbjct: 405 IKRGIEVGHIFQLGTKYTEALKATVQGEDG---RNQLMTMGCYGIGVTRVVAAAIEQNHD 461

Query: 545 N----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                 P  ++P Q  +  +         + A+ + N L+S  + +  D R E       
Sbjct: 462 ERGIIWPDAIAPFQVAILPMNMHKSFRVKDLAESLYNSLRSKGIDVIMDDRKERPGVMFA 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV---SLLDAI 638
           +  +  +P  ++ GD+      I  +   +   Q +    + D +
Sbjct: 522 DMELIGVPHTVVIGDRNLDSDEIEYKNRRNGEKQMIKTGEIEDFL 566


>gi|16128187|ref|NP_414736.1| prolyl-tRNA synthetase [Escherichia coli str. K-12 substr. MG1655]
 gi|89107075|ref|AP_000855.1| prolyl-tRNA synthetase [Escherichia coli str. K-12 substr. W3110]
 gi|170079831|ref|YP_001729151.1| prolyl-tRNA synthetase [Escherichia coli str. K-12 substr. DH10B]
 gi|238899593|ref|YP_002925389.1| prolyl-tRNA synthetase [Escherichia coli BW2952]
 gi|34395980|sp|P16659|SYP_ECOLI RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Global RNA
           synthesis factor; AltName: Full=Proline--tRNA ligase;
           Short=ProRS
 gi|226701282|sp|B1XD64|SYP_ECODH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|259511593|sp|C4ZRT7|SYP_ECOBW RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|1552770|gb|AAB08622.1| proline-tRNA ligase [Escherichia coli]
 gi|1786392|gb|AAC73305.1| prolyl-tRNA synthetase [Escherichia coli str. K-12 substr. MG1655]
 gi|85674379|dbj|BAA77870.2| prolyl-tRNA synthetase [Escherichia coli str. K12 substr. W3110]
 gi|169887666|gb|ACB01373.1| prolyl-tRNA synthetase [Escherichia coli str. K-12 substr. DH10B]
 gi|238863283|gb|ACR65281.1| prolyl-tRNA synthetase [Escherichia coli BW2952]
 gi|260450602|gb|ACX41024.1| prolyl-tRNA synthetase [Escherichia coli DH1]
 gi|315134885|dbj|BAJ42044.1| prolyl-tRNA synthetase [Escherichia coli DH1]
          Length = 572

 Score =  149 bits (376), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 50/249 (20%), Positives = 99/249 (39%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGVRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E++ P V    LWQ+SG W+ Y   +       +     R F L P +    
Sbjct: 60  EMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGE-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHTSQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   G +   V+  T       S      A++    V+ +  +     I
Sbjct: 174 YDAMYAAYSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFSDTSDYAANI 233

Query: 464 NTGVLLGEG 472
                +   
Sbjct: 234 ELAEAIAPK 242



 Score = 87.5 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 60/178 (33%), Gaps = 13/178 (7%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
           P  +   +  I R  + G I Q+         A             ++    +G  + R 
Sbjct: 395 PSPDGQGRLLIKRGIEVGHIFQLGTKYSEALKASVQGEDG---RNQILTMGCYGIGVTRV 451

Query: 535 IGIMIENFKGN----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDF 586
           +   IE          P  ++P Q  +  +         E A+++ + L++  + +  D 
Sbjct: 452 VAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLLDD 511

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R E       +  +  IP  I+ GD+      I  +   +   Q +   D +  L K+
Sbjct: 512 RKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVEYLVKQ 569


>gi|222528589|ref|YP_002572471.1| prolyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
 gi|254782881|sp|B9MPD7|SYP_ANATD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|222455436|gb|ACM59698.1| prolyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
          Length = 572

 Score =  149 bits (375), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 48/262 (18%), Positives = 105/262 (40%), Gaps = 22/262 (8%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
           +        ++E   H+ + R   +  ++   SG+  +   G+++ + + + +R ++   
Sbjct: 8   MPTLKETPSDAEIESHKLMLRSGFMRQLS---SGIYVYLPLGYRVLRKIENIVREEMDRS 64

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
             +E++   ++ + LW++SG W  +   MF +K  ++     R + L P +      +  
Sbjct: 65  GAQEVHMSALMPKELWEESGRWAVFGPEMFRIKDRNE-----REYCLGPTHEEAFTYIVR 119

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIH 408
           + + SYR+LP  L +  + +R+E      G+MR R FT  DA+ F   E   +    K++
Sbjct: 120 NEISSYRDLPKILYQIQTKFRDERRPRF-GVMRCREFTMKDAYSFDIDENGLDISYQKMY 178

Query: 409 NLIISIYKDFGFEKIMVK-----------LSTRPEKRVGSDALWDDAENIMKGVLDTIKN 457
           +  + I+K  G +  +V+                   VG   +           L+  + 
Sbjct: 179 DAYVRIFKRCGLDVKIVEADTGAMGGASSHEFMVPSSVGEAEIAYCKACGYAANLEKAEC 238

Query: 458 SSQDRINTGVLLGEGAFYGPKF 479
             +   N      +   Y P  
Sbjct: 239 LDEPVENKEEPKEKQEVYTPNV 260



 Score = 87.1 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 65/163 (39%), Gaps = 11/163 (6%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G I  +       FN  Y +   EK   +M    +   I R    +IE       
Sbjct: 402 RGIEVGHIFKLGTKYTQAFNCVYTDEKGEKKLMIMGCYGI--GINRTAAAIIEQMHDEDG 459

Query: 546 --LPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              P+ ++P + I+  +     +  + A EI   L+ + + +  D R+E    K ++  +
Sbjct: 460 IIWPITVAPYEVIIVPVNVKDENQKKIAFEIYENLQRNGVEVLIDDRDERAGVKFKDADL 519

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             IP  +  G K  SE  + IR   +  + +V +  AI ++  
Sbjct: 520 IGIPFRVTVGKK-ISEGKLEIRNRRTKESFEVEIEKAIEVVIN 561


>gi|254284280|ref|ZP_04959248.1| prolyl-tRNA synthetase [gamma proteobacterium NOR51-B]
 gi|219680483|gb|EED36832.1| prolyl-tRNA synthetase [gamma proteobacterium NOR51-B]
          Length = 564

 Score =  149 bits (375), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 51/221 (23%), Positives = 90/221 (40%), Gaps = 11/221 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L        ++E   H+ + R   +  IA    G+  W   G ++ + + + +R 
Sbjct: 7   ASQFPLFTLKETPSDAEIISHQLMLRAGMIRRIAA---GIYTWMPLGLRVLRRVEAVVRE 63

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    EI  P V    LWQ+SG W+ Y   +  ++   D     R F L P +    
Sbjct: 64  EMNNAGALEITMPVVQPAELWQESGRWEQYGPELARLRDRHD-----REFCLGPTHEEVV 118

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
            A+    +KSY++LP+ L +  + +R+E      G+MR R F   DA+ F   +    E 
Sbjct: 119 SALARSEIKSYKQLPLNLYQIQTKFRDEVRPRF-GVMRSREFIMKDAYSFHVDQASQEET 177

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
             ++H+    I+         V+  T       S      A
Sbjct: 178 YWRMHDAYSRIFNRLSLAFRPVEADTGSIGGNHSHEFHVLA 218



 Score = 48.6 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/127 (13%), Positives = 44/127 (34%), Gaps = 13/127 (10%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN- 545
           R  + G I Q+         A  ++ + +      +    +G  I R +   IE    + 
Sbjct: 409 RGIEVGHIFQLGTKYSEAMGAEVLDENGKS---TAMAMGCYGIGITRIVAAAIEQNNDDN 465

Query: 546 ---LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
               P+ ++P    +  +    + +  +  +++ +      + +  D R++    K  E 
Sbjct: 466 GIIWPVSMAPFTVALVPLNMGKSQAVADATEDLYSACVEAGIDVFMDDRDQRPGVKFAEM 525

Query: 599 SIKKIPI 605
            +   P 
Sbjct: 526 ELIASPF 532


>gi|206895814|ref|YP_002247094.1| prolyl-tRNA synthetase [Coprothermobacter proteolyticus DSM 5265]
 gi|226699133|sp|B5Y8J7|SYP_COPPD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|206738431|gb|ACI17509.1| prolyl-tRNA synthetase [Coprothermobacter proteolyticus DSM 5265]
          Length = 558

 Score =  149 bits (375), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 54/278 (19%), Positives = 105/278 (37%), Gaps = 14/278 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++          +++E   H+ L R   +  IA   SGV  +   G K+ + + + +R 
Sbjct: 3   ASKFFYKTLREDPKDAEATSHKLLIRASMIKQIA---SGVYAFLPFGHKVLKKIETVVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +E+    ++   +W+++G W+ Y  +M   K   +     + F L P +    
Sbjct: 60  EMDRIGGQEMTMSIMMPAEMWKKTGRWELYGDDMIKFKDRKE-----QDFCLGPTHEEQI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP  + +  + +R+EP     GL+R+R F   DA+ F   E+     
Sbjct: 115 TTLAGQLISSYKQLPQLVYQIQTKFRDEPRPRF-GLIRLREFVMKDAYSFHDSEESLKTT 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV--LDTIKNSSQD 461
             ++ N    I +  G    +V           S      AE     V   D+    +  
Sbjct: 174 YDQVLNAYKRILERIGLNYEVVAADPGQIGGTLSHEFIVPAEVGESTVFKCDSCGYVATS 233

Query: 462 RINTGVLLGEGAFYGPKFE-YILKDAIGRDWQCGTIQV 498
            + T VL        P  E     D    +     +Q+
Sbjct: 234 EVATSVLPAPAFLEKPALEKVHTPDTSSIEDVAEFLQL 271



 Score = 86.8 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 57/153 (37%), Gaps = 9/153 (5%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPI 553
           +         AFY +   E+  P ++     G   R +  +IE    +     P  ++P 
Sbjct: 409 LGTRYSEPLEAFYHSEDGERK-PFIMGCYGIGVT-RLVSAVIEQHHDDFGIVWPWSVAPY 466

Query: 554 QAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
             ++  I        QE+ N L S  L +  D R+E    K  +  +   P+ ++   K 
Sbjct: 467 HVVIIPIGD-VEAQVQELENTLSSAGLDVFVDDRDERPGVKFVDADLIGFPVRLVVNAK- 524

Query: 614 ASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
             E  + I+   +  T  V   D +  + + ++
Sbjct: 525 -KEGKVEIKFRKTGETLLVGQEDVLDTVLRGAV 556


>gi|223888966|ref|ZP_03623557.1| prolyl-tRNA synthetase [Borrelia burgdorferi 64b]
 gi|223885782|gb|EEF56881.1| prolyl-tRNA synthetase [Borrelia burgdorferi 64b]
          Length = 488

 Score =  149 bits (375), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 75/431 (17%), Positives = 157/431 (36%), Gaps = 61/431 (14%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
           ++ ++   E+   + +  + ++  L   +     ++     G+ I+  + S + +K K+ 
Sbjct: 1   MSDFIASKEDDYSKWYLDIVQKAKLADYSPVKGCMVI-MPYGYSIWSKIQSILDKKFKET 59

Query: 290 DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
            +E    P ++     + +  H D +      +K A           L+P +      ++
Sbjct: 60  GHENAYFPMLIPYSFLEREKDHIDGFSPEFAIIKDAGGESL-AEPLVLRPTSETIIWNMY 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
           +  +KSYR+LP+++ ++ +V R E        +R   F   + H   T      E L+  
Sbjct: 119 SKWIKSYRDLPLKINQWANVVRWEKR--TRPFLRTTEFLWQEGH---TAHATEEEALEET 173

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
            LI+ +YK F                          E+ +   +   K S +++      
Sbjct: 174 LLILDVYKRF-------------------------IEDYLAIPVFCGKKSEKEKF----- 203

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAV 527
              GA      E +++D   +  Q  T      N    F+  + +   +  H   +  + 
Sbjct: 204 --AGAVSTYSIEALMQD--KKALQAATSHYLGLNFAKAFDVKFQDKDGKMRH---VFASS 256

Query: 528 FGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTT-------ITSSAVEYAQEIANLLK 576
           +G   R IG +I    +     LP  ++PI+ IV         I    ++Y+  + + LK
Sbjct: 257 WGVSTRLIGALIMVHSDEKGLVLPPRIAPIEIIVIPIFKKEDEINKKILDYSDCVVDALK 316

Query: 577 SHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT--TQKVS 633
                +E D     +  ++      K IPI +  G  +    S+ I R         ++S
Sbjct: 317 KAEFRVEIDKDVRSSPGFRFSSAEFKGIPIRLEVGINDVLLNSVTISRRDKDRKFKYQIS 376

Query: 634 LLDAIPILTKE 644
           L   +  +  E
Sbjct: 377 LDSLVSKVKVE 387


>gi|308463013|ref|XP_003093785.1| CRE-PARS-1 protein [Caenorhabditis remanei]
 gi|308249391|gb|EFO93343.1| CRE-PARS-1 protein [Caenorhabditis remanei]
          Length = 570

 Score =  149 bits (375), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 69/430 (16%), Positives = 144/430 (33%), Gaps = 54/430 (12%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
            +Q L       +++    + ++  + ++     D SG        + +++++  +   +
Sbjct: 73  KKQTLLGVGTRKDDNYSEWYSEVITKAEMIEY-YDVSGCYVLRPWSFAVWESIQEWFDSR 131

Query: 287 IKD-DYEEINTPQ-VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           IK    +    P  V +  L ++  H   +   +  V  A ++       A++P +    
Sbjct: 132 IKKLGVKNCYFPMFVSNAALEREKTHIADFAPEVAWVTRAGNSEM-AEPVAIRPTSETVM 190

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNE 403
              +   ++S+R+LP++L ++ +V R E        +R R F   + H  +        E
Sbjct: 191 YPSYKKWVQSHRDLPIKLNQWCNVVRWEFKHPT-PFLRTREFLWQEGHTAYANAADAEKE 249

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             +I +L   +Y D     ++    +  EK  G D                         
Sbjct: 250 VFQILDLYAGVYNDLLAIPVVKGRKSEKEKFAGGD------------------------- 284

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
                      +    E  +    GR  Q  T        S+         S +      
Sbjct: 285 -----------FTTTVEAYV-ACNGRGIQGATSHHLGQNFSKMFEISYEDPSREGERAYA 332

Query: 524 HRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTTIT------SSAVEYAQEIAN 573
            +  +G   R IG MI     +  L L P    +Q IV  +        S  +   ++  
Sbjct: 333 WQNSWGLSTRSIGAMIMVHGDDKGLVLPPRVAAVQVIVVPVGFKTSNKDSLFDAVDKVTK 392

Query: 574 LLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
            L +  +  E D R N    +K     +K +PI    G  + +++ +      +   Q+V
Sbjct: 393 DLVAGGVKAEHDLRENYNAGWKFNHWELKGVPIRFEVGPNDLAKKQVTAVIRHNGEKQQV 452

Query: 633 SLLDAIPILT 642
           S+   +  + 
Sbjct: 453 SMDGIVASVK 462


>gi|332705120|ref|ZP_08425202.1| prolyl-tRNA synthetase, family II [Lyngbya majuscula 3L]
 gi|332356070|gb|EGJ35528.1| prolyl-tRNA synthetase, family II [Lyngbya majuscula 3L]
          Length = 603

 Score =  149 bits (375), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 55/243 (22%), Positives = 96/243 (39%), Gaps = 8/243 (3%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  L        E+E   H+ L R   +  I   GSG+  +    W++ + +   +R +
Sbjct: 4   SQMLLVTLREDPVEAEIPSHKLLLRAGYIRRI---GSGIYAYLPMMWRVLKKVSQIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E   PQ+    LW++SG WD+Y      +    D  +  R   L P +     
Sbjct: 61  MDATGAQECLLPQLQPSELWKESGRWDTYTKAEGIMFALID--RQKRELGLGPTHEEVIT 118

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            V    ++SYR+LP+ L +  + +R+E      GLMR R F   DA+ F T  +   +  
Sbjct: 119 TVAKDMIRSYRQLPLNLYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSFHTDHESLKKTY 177

Query: 406 KIH-NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
           +       +++   G E   V+  +      GS      A+     +L T        + 
Sbjct: 178 QAMDQAYRNMFSRSGLEFRAVEADSGAIGGSGSQEFMVLADAGEDEILYTEDGKYSANVE 237

Query: 465 TGV 467
             V
Sbjct: 238 KAV 240



 Score = 83.3 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/162 (17%), Positives = 64/162 (39%), Gaps = 9/162 (5%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I Q+     S   A Y +   E+  P+ +     G        + +++  +  
Sbjct: 435 RGIEVGHIFQLGTKYSSAMGATYTSEQGEEI-PLCMGCYGVGVSRLAQAAVEQSYDKDGI 493

Query: 548 LWL---SPIQAIVT---TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W    +P   I+T      +  +  A+++   L    +    D RNE    K ++  + 
Sbjct: 494 IWPVAIAPYHVIITIPNVGDTQQMAAAEKLYTQLNEAGIETLLDDRNERAGVKFKDADLI 553

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            IP  I+ G +   +  + +    +  + ++SL + +P L +
Sbjct: 554 GIPYRIVTG-RSLKDGKVEVVERATHKSTELSLEEVLPTLKQ 594


>gi|307132338|ref|YP_003884354.1| prolyl-tRNA synthetase [Dickeya dadantii 3937]
 gi|306529867|gb|ADM99797.1| prolyl-tRNA synthetase [Dickeya dadantii 3937]
          Length = 572

 Score =  149 bits (375), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 46/218 (21%), Positives = 90/218 (41%), Gaps = 12/218 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYMLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGLRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    EI+ P V    LWQ+SG W+ Y   +       D     R F L P +    
Sbjct: 60  EMNNAGAIEISMPVVQPADLWQESGRWEQYGPELLRFVDRGD-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + + SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++     
Sbjct: 115 TDLIRNEISSYKQLPLNFYQIQTKFRDEVRPRF-GVMRAREFLMKDAYSFHTTQESLQVT 173

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWD 442
                +  +  K F    +  +        +G +A  +
Sbjct: 174 YDA--MYAAYSKIFSRMDLDFRPVQADTGSIGGNASHE 209



 Score = 86.4 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 53/168 (31%), Gaps = 11/168 (6%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           I R  + G I Q+         A             M    +   + R I   IE    +
Sbjct: 405 IKRGIEVGHIFQLGKKYSEALKATVQGEDGRNQTLTMGCYGI--GVTRVIAAAIEQNHDD 462

Query: 546 ----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
                P  ++P Q  +  +         E A+ I   L+++ + +  D R E       +
Sbjct: 463 RGIIWPDAIAPFQVAILPMNMHKSFRVQEVAEGIYQQLRANGVDVLLDDRKERPGVMFAD 522

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
             +  IP  I+ GD+      I  +       + +   D +  L  + 
Sbjct: 523 MELIGIPHTIVIGDRNLDNDEIEYKHRRKGEKEMIKAGDIVEFLLSQC 570


>gi|302871195|ref|YP_003839831.1| prolyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
 gi|302574054|gb|ADL41845.1| prolyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
          Length = 572

 Score =  149 bits (375), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 44/212 (20%), Positives = 97/212 (45%), Gaps = 11/212 (5%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
           +        ++E   H+ + R   +  ++   SG+  +   G+++ + + + +R ++   
Sbjct: 8   MPTLKETPSDAEIESHKLMLRSGFMRQLS---SGIYVYLPLGYRVLRKIENIVREEMDRS 64

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
             +E++   ++ + LW++SG W  +   MF +K  ++     R + L P +      +  
Sbjct: 65  GAQEVHMSALMPKELWEESGRWAIFGPEMFRIKDRNE-----REYCLGPTHEEAFTYIVR 119

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIH 408
           + + SYR+LP  L +  + +R+E      G+MR R FT  DA+ F   E+  +    K++
Sbjct: 120 NEISSYRDLPKILYQIQTKFRDERRPRF-GVMRCREFTMKDAYSFDIDEKGLDISYQKMY 178

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           +  + I+K  G +  +V+  T       S   
Sbjct: 179 DAYVRIFKRCGLDVKIVEADTGAMGGASSHEF 210



 Score = 88.3 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 34/163 (20%), Positives = 63/163 (38%), Gaps = 11/163 (6%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G I  +       F   Y +   EK   +M    +   I R    +IE       
Sbjct: 402 RGIEVGHIFKLGTKYTEAFGCVYTDEKGEKKFMIMGCYGI--GINRTAAAIIEQMHDEDG 459

Query: 546 --LPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              P+ ++P + IV  +     +  + A EI   L+ + + +  D R+E    K ++  +
Sbjct: 460 IIWPITVAPYEVIVVPVNVKDENQSKIAFEIYENLQKNGVEVLIDDRDERAGVKFKDADL 519

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             IP  +  G K  SE  I IR   +  + +  + +A+  +  
Sbjct: 520 IGIPFRVTVGKK-VSEGKIEIRNRRTKESFEFEIDNAVEFIIN 561


>gi|289830168|ref|ZP_06547590.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E98-3139]
          Length = 282

 Score =  149 bits (375), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 49/248 (19%), Positives = 99/248 (39%), Gaps = 11/248 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGLRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E++ P V    LWQ+SG W+ Y   +       +     R F L P +    
Sbjct: 60  EMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGE-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLVRNELSSYKQLPLNFFQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHTSQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   G +   V+  T       S      A++    ++ +  +     I
Sbjct: 174 YDAMYAAYSRIFSRMGLDFRAVQADTGSIGGNASHEFQVLAQSGEDDIVFSDVSDYAANI 233

Query: 464 NTGVLLGE 471
                +  
Sbjct: 234 ELAEAIAP 241


>gi|237746898|ref|ZP_04577378.1| prolyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
 gi|229378249|gb|EEO28340.1| prolyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
          Length = 578

 Score =  149 bits (375), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 53/250 (21%), Positives = 99/250 (39%), Gaps = 11/250 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       ++E   H+ + R   +  +   GSG+  +   G ++   + + +R 
Sbjct: 3   ASQFFISTLKEAPADAEIISHKLMVRAGMIRRL---GSGIYAYMPMGLRVIHKIENIIRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LWQ++G W  Y   +  VK   D     R F ++P +    
Sbjct: 60  EMNRAGAVELLMPLVQPAELWQETGRWQKYGPELLRVKDRHD-----RDFIIQPTSEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + +KSYR+LP+      + +R+E      GLMR R FT  DA+ F        + 
Sbjct: 115 TDIARNVIKSYRQLPINFYHIQTKFRDERRPRF-GLMRGREFTMKDAYSFDRDVAGLKKS 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            + + +  I I+  FG +   V          GS      A+     ++ +  +     +
Sbjct: 174 YQVMFDAYIKIFTRFGLKFRPVAADNGAIGGSGSHEFHVIADTGEDALVYSRDSDYAANM 233

Query: 464 NTGVLLGEGA 473
              V L   A
Sbjct: 234 EAAVALPPTA 243



 Score = 82.1 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 68/174 (39%), Gaps = 14/174 (8%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFK 543
           AI R  + G + Q+        +A Y++ + +   P ++    +G  + R +G  IE   
Sbjct: 409 AIQRGIEVGHVFQLGTRYSEDMHATYLDENGK---PQLMQMGCYGIGVTRIMGAAIEQNN 465

Query: 544 GN----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
                  P+ ++P + ++  +    +      A ++   LK+  L +  D R E      
Sbjct: 466 DERGIIWPVSIAPFEVVLCPLGYDRSEMVRNTADKLYGTLKNAGLDVLMDDRGERPGVMF 525

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPD 649
            +  +  IP  I+ G++   E  +  +         V++ D +    K+ L  +
Sbjct: 526 SDWELIGIPHRIVIGERGLKEGKLEYQGRRDKEATAVAIDD-MANFIKDKLASE 578


>gi|326471466|gb|EGD95475.1| prolyl-tRNA synthetase [Trichophyton tonsurans CBS 112818]
          Length = 604

 Score =  149 bits (375), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 87/419 (20%), Positives = 160/419 (38%), Gaps = 68/419 (16%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHL-WQQSGHWDSYRAN 317
            D SG        + I++ + S+   KIK  + +  + P  + + +  ++  H + + A 
Sbjct: 117 YDVSGCFVLKPHSFFIWEQIQSWFDAKIKQMNVKNCSFPLFVSEDVLKKEKDHIEGFAAE 176

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           +  V  A ++  + +  A++P +       +   ++S+R+LP++L ++ SV R E     
Sbjct: 177 VAWVTHAGNSALEKK-IAIRPTSETVMYPYYAKWIRSHRDLPLKLNQWNSVVRWEFKNP- 234

Query: 378 HGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
              +R R F   + H    T+E+   E L+I      +Y++     ++    T  EK  G
Sbjct: 235 QPFLRTREFLWQEGHTAHLTREEAHTEVLQILQHYAHVYEELLAVPVIQGQKTDKEKFAG 294

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
                                                 Y    E  +  A GR  Q GT 
Sbjct: 295 G------------------------------------LYTTTVEGYIP-ATGRGIQGGTS 317

Query: 497 Q-VDFNLPSRFNAFYVNSH---SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
             +  N    F     +      EK  P+ + +  +G   R IG+M+     N  L L P
Sbjct: 318 HGLGQNFSKMFGITVEDPSARPDEKKPPLHVWQNSWGLSTRTIGVMVMIHGDNRGLVLPP 377

Query: 553 ----IQAIVTTITSSA----VEYA------QEIANLLKSHHLSIETDFRNE-TINYKIRE 597
               IQ ++  +   A     E A      + IA +L +  + IE D R+  T  +K  +
Sbjct: 378 RVADIQTVIVPVGLGAKTPDEERAAIMAEIEAIATVLSAAGVRIEVDKRDGYTPGWKFND 437

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRF---GSTTTQKVSLLD---AIPILTKESLPPDC 650
             +K IP+ +  G  E++   +   R    G      +++ D   A+P L  E++  D 
Sbjct: 438 WELKGIPLRLEFGPGESAGSFVTTSRRDIAGKEGKSSIAIKDLGTAVPALL-ETIQADL 495


>gi|312794183|ref|YP_004027106.1| prolyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii 177R1B]
 gi|312181323|gb|ADQ41493.1| prolyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii 177R1B]
          Length = 572

 Score =  149 bits (375), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 44/212 (20%), Positives = 97/212 (45%), Gaps = 11/212 (5%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
           +        ++E   H+ + R   +  ++   SG+  +   G+++ + + + +R ++   
Sbjct: 8   MPTLKETPSDAEIESHKLMLRSGFMRQLS---SGIYVYLPLGYRVLRKIENIVREEMDRS 64

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
             +E++   ++ + LW++SG W  +   MF +K  ++     R + L P +      +  
Sbjct: 65  GAQEVHMSALMPKELWEESGRWAVFGPEMFRIKDRNE-----REYCLGPTHEEAFTYIVR 119

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIH 408
           + + SYR+LP  L +  + +R+E      G+MR R FT  DA+ F   E+  +    K++
Sbjct: 120 NEITSYRDLPKILYQIQTKFRDERRPRF-GVMRCREFTMKDAYSFDIDEKGLDISYQKMY 178

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           +  + I+K  G +  +V+  T       S   
Sbjct: 179 DAYVRIFKRCGLDVKIVEADTGAMGGASSHEF 210



 Score = 91.4 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 39/168 (23%), Positives = 66/168 (39%), Gaps = 14/168 (8%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G I  +       FN  Y +   EK   +M    +   I R    +IE       
Sbjct: 402 RGIEVGHIFKLGTKYTQAFNCVYTDEKGEKKLMIMGCYGI--GINRTAAAIIEQMHDEDG 459

Query: 546 --LPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              P+ ++P + IV  +     +  + A EI   L+ + + +  D R+E    K ++  +
Sbjct: 460 IIWPITVAPYEVIVVPVNVNDENQNKIAFEIYEKLQKNGVEVLIDDRDERAGVKFKDADL 519

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI---LTKES 645
             IP  +  G K  SE  + IR   +  + +V +  AI     L KE 
Sbjct: 520 IGIPFRVTVGKK-VSEGKLEIRNRRTKESFEVEIEKAIEFVINLIKEE 566


>gi|226320972|ref|ZP_03796518.1| prolyl-tRNA synthetase [Borrelia burgdorferi 29805]
 gi|226233623|gb|EEH32358.1| prolyl-tRNA synthetase [Borrelia burgdorferi 29805]
          Length = 488

 Score =  149 bits (375), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 75/431 (17%), Positives = 157/431 (36%), Gaps = 61/431 (14%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
           ++ ++   E+   + +  + ++  L   +     ++     G+ I+  + S + +K K+ 
Sbjct: 1   MSDFIASKEDDYSKWYLDIVQKAKLADYSPVKGCMVI-MPYGYSIWSKIQSILDKKFKET 59

Query: 290 DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
            +E    P ++     + +  H D +      +K A           L+P +      ++
Sbjct: 60  GHENAYFPMLIPYSFLEREKDHIDGFSPEFAIIKDAGGESL-AEPLVLRPTSETIIWNMY 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
           +  +KSYR+LP+++ ++ +V R E        +R   F   + H   T      E L+  
Sbjct: 119 SKWIKSYRDLPLKINQWANVVRWEKR--TRPFLRTTEFLWQEGH---TAHATEEEALEET 173

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
            LI+ +YK F                          E+ +   +   K S +++      
Sbjct: 174 LLILDVYKRF-------------------------IEDYLAIPVFCGKKSEKEKF----- 203

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAV 527
              GA      E +++D   +  Q  T      N    F+  + +   +  H   +  + 
Sbjct: 204 --AGAVSTYSIEALMQD--KKALQAATSHYLGLNFAKAFDVKFQDKDGKMRH---VFASS 256

Query: 528 FGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTT-------ITSSAVEYAQEIANLLK 576
           +G   R IG +I    +     LP  ++PI+ IV         I    ++Y+  + + LK
Sbjct: 257 WGVSTRLIGALIMVHSDEKGLVLPPRIAPIEIIVIPIFKKGDEINKKILDYSDCVVDTLK 316

Query: 577 SHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT--TQKVS 633
                +E D     +  ++      K IPI +  G  +    S+ I R         ++S
Sbjct: 317 KAEFRVEIDKDVRSSPGFRFSSAEFKGIPIRLEVGINDVLLNSVTISRRDKDRKFKYQIS 376

Query: 634 LLDAIPILTKE 644
           L   +  +  E
Sbjct: 377 LDSLVSKVKVE 387


>gi|15828654|ref|NP_326014.1| prolyl-tRNA synthetase [Mycoplasma pulmonis UAB CTIP]
 gi|14089596|emb|CAC13356.1| PROLYL-TRNA SYNTHETASE (PROLINE--TRNA LIGASE) [Mycoplasma pulmonis]
          Length = 501

 Score =  149 bits (375), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 62/432 (14%), Positives = 155/432 (35%), Gaps = 61/432 (14%)

Query: 229 QELTQYLYFLEESEKR--DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
            ++ +        E     +  + +  +L         +  +    + I++ +     + 
Sbjct: 24  WDMKKLEKITPLEENFAKWYTDVVKNGELIDYGPVKGTL-IFKPNSYGIWENIQLQFNKI 82

Query: 287 IKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           +K    + +  P ++ + L + +  H + +   +  +            + L+P +    
Sbjct: 83  LKAKGIKNVYLPLLIPESLMKAEFEHIEGFAPELATLTKVGSKNLSENIY-LRPTSEVLF 141

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH-VFCTKEQMFNE 403
              F   ++SY++LP    ++ +V R E   + +  +R   F   + H    +  +    
Sbjct: 142 QKFFKAEIESYKDLPKIYNQWANVIRWEK--TTNPFLRSTEFLWQEGHSSHESAIEARKF 199

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             ++        + F     ++   T  EK  G                           
Sbjct: 200 TREMLKTYCKFLRKFLAIPTIMGKKTPREKFSG--------------------------- 232

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVM 522
                    A+     E ++KD  G+  Q GT      N    ++  + +S ++K     
Sbjct: 233 ---------AYSTYTLEAMMKD--GKALQSGTTHYLAQNFSEAYDVNFKDSENKKQ---F 278

Query: 523 IHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVT----TITSSAVEYAQEIANL 574
           +++  +G   R IG +I     N    +P +++P Q  +       ++   ++  ++  +
Sbjct: 279 VYQTSWGLSTRLIGAIIMTHGDNRGIIIPPFVAPCQIDILAFNPRRSAEIEKFVNQVEKI 338

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           LK     +  D  ++T+ +K  +  I+ +P+ I  G ++     + + R  +   Q VS+
Sbjct: 339 LKKP-FRVNVDRSDKTLGFKASQSEIQGVPLRIEIGPRDFENNQVTLVRRDTLEKQSVSI 397

Query: 635 LDAIPILTKESL 646
            D I  +++E+L
Sbjct: 398 ND-IVKVSRETL 408


>gi|255513372|gb|EET89638.1| prolyl-tRNA synthetase [Candidatus Micrarchaeum acidiphilum
           ARMAN-2]
          Length = 484

 Score =  149 bits (375), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 69/384 (17%), Positives = 143/384 (37%), Gaps = 56/384 (14%)

Query: 256 FHIAEDGSGVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQ-QSGHWDS 313
           F      SGVI +   G+ ++  + +      IK   +    P  + +   + +  H   
Sbjct: 31  FVDYSAVSGVIVFRPDGYFVWDAIRNATNELFIKAGIQNAYFPLFIPEKFLEKEKEHVKG 90

Query: 314 YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP 373
           +   +  V  A D+  D R  A++P +       ++  ++S+R+LP+RL ++ +V R E 
Sbjct: 91  FTPEVAWVTHAGDSKLDER-LAVRPTSETIMYDSYSKWIRSWRDLPLRLNQWNNVVRWEF 149

Query: 374 SGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
                  +R R F  ++ H  F T+ +   E   I  +   + +++     +    T  E
Sbjct: 150 KHPT-PFLRSREFLWNEGHTAFATQAEADAERDVILGIYEKVLEEYLALPGIKGRKTNYE 208

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
           K  G                                    A      E+++ D  G+  Q
Sbjct: 209 KFAG------------------------------------ALRSYSIEHLMPD--GKAIQ 230

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPL 548
                 D    S+  AF +    ++     +++  F    R +G+++    ++    +P 
Sbjct: 231 GPDFHSDGQNFSK--AFEIKFLDKRGKMEYVYQNTFAISTRELGVLVATHSDDKGLIIPP 288

Query: 549 WLSPIQAIVTTIT-----SSAVEYAQEIANLLKSHHLSIETDFRN-ETINYKIREHSIKK 602
            L+ IQ ++  I       S ++Y ++I   L+     +  D  +  +  +K  E  +K 
Sbjct: 289 KLARIQVVIVPIYKTENRDSIIDYCKKIKKELEDS-FRVFLDDSDAYSPGWKFNEWELKG 347

Query: 603 IPIIIICGDKEASERSIGIRRFGS 626
           +P+ I  G+KE       + R  +
Sbjct: 348 VPVRIEIGEKETKLDEATLFRRDT 371


>gi|213619333|ref|ZP_03373159.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-2068]
          Length = 115

 Score =  149 bits (375), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 37/111 (33%), Positives = 61/111 (54%)

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           F G  P WL+P+Q +V  IT S  EY  E+   L++  + ++ D RNE I +KIREH+++
Sbjct: 2   FAGFFPTWLAPVQVVVMNITDSQSEYVNELTQKLQNAGIRVKADLRNEKIGFKIREHTLR 61

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           ++P +++CGDKE     + +R         + + D I  L +E      Q+
Sbjct: 62  RVPYMLVCGDKEVEAGKVAVRTRRGKDLGSLDVNDVIEKLQQEIRSRSLQQ 112


>gi|15237183|ref|NP_200065.1| OVA6 (OVULE ABORTION 6); ATP binding / aminoacyl-tRNA ligase/
           nucleotide binding / proline-tRNA ligase [Arabidopsis
           thaliana]
 gi|10177035|dbj|BAB10183.1| prolyl tRNA synthetase [Arabidopsis thaliana]
 gi|34365755|gb|AAQ65189.1| At5g52520 [Arabidopsis thaliana]
 gi|51970984|dbj|BAD44184.1| prolyl tRNA synthetase [Arabidopsis thaliana]
 gi|332008841|gb|AED96224.1| prolyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 543

 Score =  149 bits (375), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 58/402 (14%), Positives = 136/402 (33%), Gaps = 60/402 (14%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
            +    + +    +     +  +    +L         ++     G+ I++ +  Y+  K
Sbjct: 58  DRLRSDRAVTPRSQDFNAWYLDVIASAELADYGPVRGTMVI-RPYGYAIWEAIQDYLNVK 116

Query: 287 IKD-DYEEINTPQVLDQHL-WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
            K+  +  +  PQ +      +++ H + +   +  V        + +   ++P +    
Sbjct: 117 FKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTVGGGKELEEK-LVVRPTSETIV 175

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNE 403
             +F   + SYR+LP+ + ++ +V R E        +R   F   + H    T E+   E
Sbjct: 176 NHMFTQWIHSYRDLPLMINQWANVTRWEMR--TKPFIRTLEFLWQEGHTAHATPEEAEKE 233

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             ++  +      +     ++    ++ E   G+D                        I
Sbjct: 234 AKQMIEIYTRFAFEQTAIPVIPGRKSKLETFAGAD------------------------I 269

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVM 522
              +    G                +  Q GT   +  N    F   + + + E+ H   
Sbjct: 270 TYTIEAMMG--------------DRKALQAGTSHNLGQNFSRAFGTQFADENGERQH--- 312

Query: 523 IHRAVFGSIERFIGIMIENFKGNL----PLWLSPIQAIVTTITSSAVEY------AQEIA 572
           + +  +    RF+G +I     +     P  ++PIQ ++  I     E       A  + 
Sbjct: 313 VWQTSWAVSTRFVGGIIMTHGDDTGLMLPPKIAPIQVVIVPIWKKDTEKTGVLSAASSVK 372

Query: 573 NLLKSHHLSIETDFRN-ETINYKIREHSIKKIPIIIICGDKE 613
             L++  + ++ D  +  T  +K     +K IP+ I  G ++
Sbjct: 373 EALQTAGVRVKLDDTDQRTPGWKFNFWEMKGIPLRIEIGPRD 414


>gi|310764925|gb|ADP09875.1| prolyl-tRNA synthetase [Erwinia sp. Ejp617]
          Length = 572

 Score =  149 bits (375), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 52/241 (21%), Positives = 98/241 (40%), Gaps = 11/241 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            TQ  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TTQYLLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGLRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    EI+ P V    LWQ+SG W+ Y   +  +    D     R F L P +    
Sbjct: 60  EMNNAGAIEISMPVVQPADLWQESGRWEQYGPELLRLVDRSD-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+ L +  + +R+E      G+MR R F   DA+ F T +    E 
Sbjct: 115 TDLIRNELSSYKQLPLNLFQIQTKFRDEVRPRF-GVMRSREFIMKDAYSFHTSQGSLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++      +   G +   V+  T       S      A++    ++ +  +     I
Sbjct: 174 YDAMYRAYSQSFSRMGLDFRAVQADTGSIGGNASHEFQVLAQSGEDDIVFSTGSDYAANI 233

Query: 464 N 464
            
Sbjct: 234 E 234



 Score = 87.1 bits (214), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 58/168 (34%), Gaps = 13/168 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           I R  + G I Q+         A             ++    +G  I R +   IE N  
Sbjct: 405 IKRGIEVGHIFQLGTKYSEAMKASVQGEDG---RNQILTMGCYGIGITRIVAAAIEQNHD 461

Query: 544 GNLPLW---LSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
               +W   L+P Q  +  +         E A+E+ + L++  + +  D R E       
Sbjct: 462 ERGIIWSPALAPFQVAILPMNMQKSFRVKELAEELYHQLRAKGIDVILDDRKERPGVMFA 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  +  +P  ++ G++      I  +   +   + +   + +  L  E
Sbjct: 522 DMELIGVPHTVVIGERNLDSEEIEYKSRRAGEKRMMKTNEIVDFLVAE 569


>gi|259907567|ref|YP_002647923.1| prolyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
 gi|224963189|emb|CAX54673.1| Prolyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
 gi|283477409|emb|CAY73325.1| proS [Erwinia pyrifoliae DSM 12163]
          Length = 572

 Score =  149 bits (375), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 52/241 (21%), Positives = 98/241 (40%), Gaps = 11/241 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            TQ  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TTQYLLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGLRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    EI+ P V    LWQ+SG W+ Y   +  +    D     R F L P +    
Sbjct: 60  EMNNAGAIEISMPVVQPADLWQESGRWEQYGPELLRLVDRSD-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+ L +  + +R+E      G+MR R F   DA+ F T +    E 
Sbjct: 115 TDLIRNELSSYKQLPLNLFQIQTKFRDEVRPRF-GVMRSREFIMKDAYSFHTSQGSLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++      +   G +   V+  T       S      A++    ++ +  +     I
Sbjct: 174 YDAMYRAYSQSFSRMGLDFRAVQADTGSIGGNASHEFQVLAQSGEDDIVFSTGSDYAANI 233

Query: 464 N 464
            
Sbjct: 234 E 234



 Score = 88.3 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 58/168 (34%), Gaps = 13/168 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           I R  + G I Q+         A             ++    +G  I R +   IE N  
Sbjct: 405 IKRGIEVGHIFQLGTKYSEAMKASVQGEDG---RNQILTMGCYGIGITRIVAAAIEQNHD 461

Query: 544 GNLPLW---LSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
               +W   L+P Q  +  +         E A+E+ + L++  + +  D R E       
Sbjct: 462 ERGIIWSPALAPFQVAILPMNMQKSFRVKELAEELYHQLRAKGIDVILDDRKERPGVMFA 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  +  IP  ++ G++      +  +   +   + +   + +  L  E
Sbjct: 522 DMELIGIPHTVVIGERNLDSEEVEYKSRRAGEKRMMKTNEIVDFLVAE 569


>gi|194290784|ref|YP_002006691.1| prolyl-tRNA synthetase [Cupriavidus taiwanensis LMG 19424]
 gi|226699135|sp|B3R894|SYP_CUPTR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|193224619|emb|CAQ70630.1| prolyl-tRNA synthetase [Cupriavidus taiwanensis LMG 19424]
          Length = 573

 Score =  149 bits (375), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 46/222 (20%), Positives = 96/222 (43%), Gaps = 11/222 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       ++E   H+ + R   +  +   G+G+  +   G ++ + + + +R 
Sbjct: 3   ASQFFISTLKEAPADAEIVSHKLMMRAGMIKKL---GAGIYNYMPIGLRVIRKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E++ P +    LWQ++G WD     +  +K      +  R FA++P +    
Sbjct: 60  EMNRAGAVELSMPVIQPAELWQETGRWDKMGPELLRLKD-----RHERDFAVQPTSEEVV 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
             +    ++SY++LPV   +  + +R+E      G+MR R FT  DA+ F    + +   
Sbjct: 115 TDIARSEIRSYKQLPVNFYQIQTKFRDERRPRF-GIMRGREFTMKDAYSFDRDTDGLRKS 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
              +++  + I++ FG E   V          GS      AE
Sbjct: 174 YENMYDAYVRIFRRFGLEFRAVAADNGAIGGSGSHEFHVIAE 215



 Score = 82.9 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 30/169 (17%), Positives = 57/169 (33%), Gaps = 16/169 (9%)

Query: 484 KDAIGRDWQCGTIQVDFN------LPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
            D  G    C  I+V              NA +++ +  K  P+ +     G I R +G 
Sbjct: 398 PDGQGTLEICRGIEVGHVFMLGTRYSESMNATFLDENG-KTQPMQMGCYGIG-ITRILGA 455

Query: 538 MIENFKGN----LPLWLSPIQAIVTTITSSAVEY----AQEIANLLKSHHLSIETDFRNE 589
            IE          P  ++P   ++  +     E     A  I   L +  + +  D R E
Sbjct: 456 AIEQNFDERGIIWPAAIAPFAVVICPVGYDRSEAVKAEADRIHAELLAAGVDVILDDRGE 515

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
                  +  +  +P  ++ GD+   E  +  +         VS+ + +
Sbjct: 516 RPGVMFADWELIGVPHRVVVGDRGLKEGKVEYQGRRDAQATAVSVAEVV 564


>gi|145598925|ref|YP_001163001.1| prolyl-tRNA synthetase [Yersinia pestis Pestoides F]
 gi|166980173|sp|A4TL66|SYP_YERPP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|145210621|gb|ABP40028.1| prolyl-tRNA synthetase [Yersinia pestis Pestoides F]
          Length = 572

 Score =  149 bits (375), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 52/259 (20%), Positives = 98/259 (37%), Gaps = 15/259 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTQKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGVRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E++ P V    LWQ+SG W+ Y   +       +     R F L P +    
Sbjct: 60  EMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGE-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLIRGEINSYKQLPLNFFQIQTKFRDEVRPRF-GVMRAREFLMKDAYSFHTTQESLQET 173

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG---SDALWDDAENIMKGVLDTIKNSSQD 461
                   S  K F    +  +        +G   S      AE+    ++ +  +    
Sbjct: 174 YDAMYTAYS--KIFSRMDLNFRAVLADTGSIGGSASHEFQVLAESGEDDIVFSTGSDYAA 231

Query: 462 RINTGVLLGEGAFYGPKFE 480
            I     L       P  E
Sbjct: 232 NIEFAEALAPTEPRAPATE 250



 Score = 85.2 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 56/168 (33%), Gaps = 13/168 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           I R  + G I Q+         A             ++    +G  + R +   IE    
Sbjct: 405 IKRGIEVGHIFQLGTKYSEVMKATVQGEDG---RNQVMTMGCYGIGVSRVVAAAIEQNHD 461

Query: 545 N----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +     P  ++P Q  +  +         E A+E+   L+SH + +  D R E       
Sbjct: 462 DRGIIWPDAIAPFQVAILPMNMHKSFRVKELAEELYTTLRSHGIDVILDDRKERPGVMFA 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  +  +P  I+ GD+      +  +       Q +   + +  L  +
Sbjct: 522 DMELIGVPHNIVIGDRNLDSEEVEYKNRRVGEKQMIKTSEIVEFLLSQ 569


>gi|114152217|sp|Q98R27|SYP_MYCPU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
          Length = 476

 Score =  149 bits (375), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 64/421 (15%), Positives = 156/421 (37%), Gaps = 59/421 (14%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
           LEE+  + +  + +  +L         +  +    + I++ +     + +K    + +  
Sbjct: 10  LEENFAKWYTDVVKNGELIDYGPVKGTL-IFKPNSYGIWENIQLQFNKILKAKGIKNVYL 68

Query: 297 PQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P ++ + L + +  H + +   +  +            + L+P +       F   ++SY
Sbjct: 69  PLLIPESLMKAEFEHIEGFAPELATLTKVGSKNLSENIY-LRPTSEVLFQKFFKAEIESY 127

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISI 414
           ++LP    ++ +V R E   + +  +R   F   + H    +  +      ++       
Sbjct: 128 KDLPKIYNQWANVIRWEK--TTNPFLRSTEFLWQEGHSSHESAIEARKFTREMLKTYCKF 185

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            + F     ++   T  EK  G                                    A+
Sbjct: 186 LRKFLAIPTIMGKKTPREKFSG------------------------------------AY 209

Query: 475 YGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
                E ++KD  G+  Q GT      N    ++  + +S ++K     +++  +G   R
Sbjct: 210 STYTLEAMMKD--GKALQSGTTHYLAQNFSEAYDVNFKDSENKKQ---FVYQTSWGLSTR 264

Query: 534 FIGIMIENFKGN----LPLWLSPIQAIVT----TITSSAVEYAQEIANLLKSHHLSIETD 585
            IG +I     N    +P +++P Q  +       ++   ++  ++  +LK     +  D
Sbjct: 265 LIGAIIMTHGDNRGIIIPPFVAPCQIDILAFNPRRSAEIEKFVNQVEKILKKP-FRVNVD 323

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
             ++T+ +K  +  I+ +P+ I  G ++     + + R  +   Q VS+ D I  +++E+
Sbjct: 324 RSDKTLGFKASQSEIQGVPLRIEIGPRDFENNQVTLVRRDTLEKQSVSIND-IVKVSRET 382

Query: 646 L 646
           L
Sbjct: 383 L 383


>gi|153947724|ref|YP_001400022.1| prolyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
 gi|170023340|ref|YP_001719845.1| prolyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
 gi|166980172|sp|A7FFJ4|SYP_YERP3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226701362|sp|B1JQI5|SYP_YERPY RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|152959219|gb|ABS46680.1| prolyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
 gi|169749874|gb|ACA67392.1| prolyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
          Length = 572

 Score =  149 bits (375), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 52/259 (20%), Positives = 98/259 (37%), Gaps = 15/259 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTQKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGVRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E++ P V    LWQ+SG W+ Y   +       +     R F L P +    
Sbjct: 60  EMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGE-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLIRGEINSYKQLPLNFFQIQTKFRDEVRPRF-GVMRAREFLMKDAYSFHTTQESLQET 173

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG---SDALWDDAENIMKGVLDTIKNSSQD 461
                   S  K F    +  +        +G   S      AE+    ++ +  +    
Sbjct: 174 YDAMYTAYS--KIFSRMDLNFRAVLADTGSIGGSASHEFQVLAESGEDDIVFSTGSDYAA 231

Query: 462 RINTGVLLGEGAFYGPKFE 480
            I     L       P  E
Sbjct: 232 NIEFAEALAPTEPRAPATE 250



 Score = 85.6 bits (210), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 56/168 (33%), Gaps = 13/168 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           I R  + G I Q+         A             ++    +G  + R +   IE    
Sbjct: 405 IKRGIEVGHIFQLGTKYSEAMKATVQGEDG---RNQVMTMGCYGIGVSRVVAAAIEQNHD 461

Query: 545 N----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +     P  ++P Q  +  +         E A+E+   L+SH + +  D R E       
Sbjct: 462 DRGIIWPDAIAPFQVAILPMNMHKSFRVKELAEELYTTLRSHGIDVILDDRKERPGVMFA 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  +  +P  I+ GD+      +  +       Q +   + +  L  +
Sbjct: 522 DMELIGVPHNIVIGDRNLDSEEVEYKNRRVGEKQMIKTSEIVEFLLSQ 569


>gi|224533003|ref|ZP_03673610.1| proline--tRNA ligase [Borrelia burgdorferi WI91-23]
 gi|225549051|ref|ZP_03770026.1| prolyl-tRNA synthetase [Borrelia burgdorferi 94a]
 gi|225549517|ref|ZP_03770483.1| prolyl-tRNA synthetase [Borrelia burgdorferi 118a]
 gi|224512063|gb|EEF82457.1| proline--tRNA ligase [Borrelia burgdorferi WI91-23]
 gi|225369794|gb|EEG99241.1| prolyl-tRNA synthetase [Borrelia burgdorferi 118a]
 gi|225370277|gb|EEG99715.1| prolyl-tRNA synthetase [Borrelia burgdorferi 94a]
          Length = 488

 Score =  149 bits (375), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 75/431 (17%), Positives = 157/431 (36%), Gaps = 61/431 (14%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
           ++ ++   E+   + +  + ++  L   +     ++     G+ I+  + S + +K K+ 
Sbjct: 1   MSDFIASKEDDYSKWYLDIVQKAKLADYSPVKGCMVI-MPYGYSIWSKIQSILDKKFKET 59

Query: 290 DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
            +E    P ++     + +  H D +      +K A           L+P +      ++
Sbjct: 60  GHENAYFPMLIPYSFLEREKDHIDGFSPEFAIIKDAGGESL-AEPLVLRPTSETIIWNMY 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
           +  +KSYR+LP+++ ++ +V R E        +R   F   + H   T      E L+  
Sbjct: 119 SKWIKSYRDLPLKINQWANVVRWEKR--TRPFLRTTEFLWQEGH---TAHATEEEALEET 173

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
            LI+ +YK F                          E+ +   +   K S +++      
Sbjct: 174 LLILDVYKRF-------------------------IEDYLAIPVFCGKKSEKEKF----- 203

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAV 527
              GA      E +++D   +  Q  T      N    F+  + +   +  H   +  + 
Sbjct: 204 --AGAVSTYSIEALMQD--KKALQAATSHYLGLNFAKAFDVKFQDKDGKMRH---VFASS 256

Query: 528 FGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTT-------ITSSAVEYAQEIANLLK 576
           +G   R IG +I    +     LP  ++PI+ IV         I    ++Y+  + + LK
Sbjct: 257 WGVSTRLIGALIMVHSDEKGLVLPPRIAPIEIIVIPIFKKEDEINKKILDYSDCVVDALK 316

Query: 577 SHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT--TQKVS 633
                +E D     +  ++      K IPI +  G  +    S+ I R         ++S
Sbjct: 317 KAEFRVEIDKDVRSSPGFRFSSAEFKGIPIRLEVGINDVLLNSVTISRRDKDRKFKYQIS 376

Query: 634 LLDAIPILTKE 644
           L   +  +  E
Sbjct: 377 LDSLVSKVKVE 387


>gi|187930129|ref|YP_001900616.1| prolyl-tRNA synthetase [Ralstonia pickettii 12J]
 gi|226701322|sp|B2UCU9|SYP_RALPJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|187727019|gb|ACD28184.1| prolyl-tRNA synthetase [Ralstonia pickettii 12J]
          Length = 574

 Score =  149 bits (375), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 47/221 (21%), Positives = 91/221 (41%), Gaps = 11/221 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       ++E   H+ + R   +  +   G+G+  +   G ++ + +   +R 
Sbjct: 3   ASQFFISTLKEAPADAEIVSHKLMMRAGMIKKL---GAGLYTYMPVGLRVIRKVEQIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LWQ++G WD     +   K      +  R F ++P +    
Sbjct: 60  EMNAAGAVEVLMPVVQPGELWQETGRWDKMGDELLRFKD-----RHERDFVMQPTSEEVV 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
             +    ++SY++LPV   +  + +R+E      G+MR R FT  DA+ F    E +   
Sbjct: 115 TDIARTEIRSYKQLPVNFYQIQTKFRDERRPRF-GIMRGREFTMKDAYSFDRDAEGLKVS 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
             K+++    I++ FG E   V          GS      A
Sbjct: 174 YQKMYDAYTRIFQRFGLEFRAVAADNGAIGGSGSHEFHVIA 214



 Score = 89.8 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 68/198 (34%), Gaps = 19/198 (9%)

Query: 462 RINTGVLLGEGAFYGPKFEYI---LKDAIGRDWQCGTIQVDFN------LPSRFNAFYVN 512
            +N G  L E   Y  +         D  G    C  I+V              NA +++
Sbjct: 374 GVNWGRDLPEPEVYDLRNVVAGDASPDGKGTLAICRGIEVGHVFMLGTRYSEAMNATFLD 433

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTI----TSSA 564
            +  K  P+++     G I R +G  IE          P  ++P Q ++  +    + + 
Sbjct: 434 ENG-KTQPMVMGCYGIG-ITRILGAAIEQNYDARGIIWPASIAPFQVVICPVGYDRSDAV 491

Query: 565 VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRF 624
            E A  +   L +  + +  D R E       +  +  +P  ++ GD+   E  +  +  
Sbjct: 492 REEADRLHAELVAAGIDVMLDDRGERPGAMFADWELIGVPFRVVVGDRGLKEGKLEFQGR 551

Query: 625 GSTTTQKVSLLDAIPILT 642
                  V+  D +  L 
Sbjct: 552 RDEAATAVAPADVLATLK 569


>gi|238792729|ref|ZP_04636360.1| Prolyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
 gi|238727837|gb|EEQ19360.1| Prolyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
          Length = 572

 Score =  149 bits (375), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 64/385 (16%), Positives = 125/385 (32%), Gaps = 46/385 (11%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGVRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E++ P V    LWQ+SG W+ Y   +       +     R F L P +    
Sbjct: 60  EMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGE-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLIRGEINSYKQLPLNFFQIQTKFRDEVRPRF-GVMRAREFLMKDAYSFHTTQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     ++         V   T       S      AE+    ++ +  +     I
Sbjct: 174 YDAMYAAYSKVFSRMDLNFRAVLADTGSIGGSASHEFQVLAESGEDDIVFSTGSDYAANI 233

Query: 464 NTGVLLGEGAFYGPKFEY-----------------ILKDAIGRDWQCGTIQVDFNLPSRF 506
                +   A      E                    K  I +  +   +        + 
Sbjct: 234 EFAEAVAPSAPRAVATEKLRIIDTPNAKTIAELVEQFKLPIEKTVKTLMVHAHEESGHKL 293

Query: 507 NAFYVNSHSE------KCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTI 560
            A  V    E      +  P +     F S E    ++     G  P  L P+   +  +
Sbjct: 294 VALLVRGDHELNEIKAEKLPQVAKPLTFASEEEIRAVI-----GAGPGSLGPVNLQLPVV 348

Query: 561 TSSAVEYAQEIANLLKSHHLSIETD 585
                  A     ++         D
Sbjct: 349 -------ADRSVAVMSDFGAGANID 366



 Score = 86.0 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 55/165 (33%), Gaps = 13/165 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           I R  + G I Q+         A             ++    +G  + R +   IE    
Sbjct: 405 IKRGIEVGHIFQLGTKYSEAMKATVQGEDG---RNQVMTMGCYGIGVSRVVAAAIEQNHD 461

Query: 545 N----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +     P  ++P Q  +  +         E A+E+   L+SH + +  D R E       
Sbjct: 462 DRGIIWPDAIAPFQVAILPMNMHKSFRVKELAEELYATLRSHGIDVILDDRKERPGVMFA 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           +  +  +P  I+ GD+      +  +       Q +   + I  L
Sbjct: 522 DMELIGVPHNIVIGDRNLDSEEVEYKNRRVGEKQMIKTSEIIDFL 566


>gi|92111782|gb|ABE73635.1| threonyl-tRNA synthetase [Streptococcus salivarius]
 gi|92111784|gb|ABE73636.1| threonyl-tRNA synthetase [Streptococcus salivarius]
 gi|92111788|gb|ABE73638.1| threonyl-tRNA synthetase [Streptococcus salivarius]
 gi|92111790|gb|ABE73639.1| threonyl-tRNA synthetase [Streptococcus salivarius]
 gi|92111792|gb|ABE73640.1| threonyl-tRNA synthetase [Streptococcus salivarius]
 gi|92111794|gb|ABE73641.1| threonyl-tRNA synthetase [Streptococcus salivarius]
 gi|92111796|gb|ABE73642.1| threonyl-tRNA synthetase [Streptococcus salivarius]
 gi|92111798|gb|ABE73643.1| threonyl-tRNA synthetase [Streptococcus salivarius]
 gi|92111800|gb|ABE73644.1| threonyl-tRNA synthetase [Streptococcus salivarius]
 gi|92111802|gb|ABE73645.1| threonyl-tRNA synthetase [Streptococcus salivarius]
 gi|92111804|gb|ABE73646.1| threonyl-tRNA synthetase [Streptococcus salivarius]
 gi|92111806|gb|ABE73647.1| threonyl-tRNA synthetase [Streptococcus salivarius]
 gi|92111814|gb|ABE73651.1| threonyl-tRNA synthetase [Streptococcus salivarius]
 gi|92111816|gb|ABE73652.1| threonyl-tRNA synthetase [Streptococcus vestibularis]
 gi|92111818|gb|ABE73653.1| threonyl-tRNA synthetase [Streptococcus vestibularis]
 gi|92111820|gb|ABE73654.1| threonyl-tRNA synthetase [Streptococcus salivarius]
          Length = 165

 Score =  149 bits (375), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 75/167 (44%), Positives = 121/167 (72%), Gaps = 5/167 (2%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQIEKKMQE 128
           L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D E    S+++L +IE++M++
Sbjct: 1   LPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNEAGQISNEDLPRIEEEMKK 60

Query: 129 IIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKE-NVTLYRQGEWFDLCRGPH 187
           I+  + P +++ ++ ++ARE+F+   + YK+E++E     E  +T+YRQGE+ DLCRGPH
Sbjct: 61  IVKENFPSIREEVTKDEAREIFK--NDPYKLELIEEHSEDEGGLTIYRQGEYVDLCRGPH 118

Query: 188 VRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
           V STG+++ F  L  VAGAYWRG+S+  M+ RIYGTAW  +++L  Y
Sbjct: 119 VPSTGRIQVFHLL-NVAGAYWRGNSDNAMMQRIYGTAWFDKKDLKAY 164


>gi|300309711|ref|YP_003773803.1| prolyl-tRNA synthetase [Herbaspirillum seropedicae SmR1]
 gi|300072496|gb|ADJ61895.1| prolyl-tRNA synthetase [Herbaspirillum seropedicae SmR1]
          Length = 575

 Score =  149 bits (375), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 49/208 (23%), Positives = 89/208 (42%), Gaps = 11/208 (5%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
            ++E   H+ + R   +  +   G+G+  +   G ++ + + + +R ++      E+  P
Sbjct: 16  SDAEIVSHKLMMRAGMIKRL---GAGIYTYMPMGLRVIRKVEAIVREEMNRAGAVELLMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            V    LWQ++G W+   A +  VK      +  R FA++P +      V    L+SY++
Sbjct: 73  VVQPAELWQETGRWNKMGAELMRVKD-----RHGRDFAIQPTSEEVVTDVARSELRSYKQ 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYK 416
           LPV      + +R+E      GLMR R FT  DA+ F    + +      +++  + I+ 
Sbjct: 128 LPVNFYHIQTKFRDERRPRF-GLMRGREFTMKDAYSFDRDVDGLKKSYQAMYDAYVRIFT 186

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDA 444
            FG E   V          GS      A
Sbjct: 187 RFGLEFRAVAADNGAIGGSGSHEFHVVA 214



 Score = 88.7 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 29/166 (17%), Positives = 63/166 (37%), Gaps = 11/166 (6%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE---- 540
           AI R  + G + Q+         A Y++   +   P+++     G   R +G  IE    
Sbjct: 407 AIQRGIEVGHVFQLGTTYSEAMKATYLDEAGKPQ-PLVMGCYGIGVT-RILGAAIEQNFD 464

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQ----EIANLLKSHHLSIETDFRNETINYKIR 596
           +     P  ++P + ++  +     E  +    ++   L    + +  D R E       
Sbjct: 465 DRGIIWPTSIAPFEVVLCPMGYDRSEAVKTEIDKLYAQLSEAGVDVVLDDRGERPGAMFA 524

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +  +  +P  I+ GD+   + +I  +    T   +V L +A+  + 
Sbjct: 525 DWELIGVPHRIVVGDRGLKDGNIEYQGRRDTEATQVPLAEALAFIQ 570


>gi|322657154|gb|EFY53437.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. CASC_09SCPH15965]
 gi|322686289|gb|EFY82273.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 446600]
          Length = 277

 Score =  149 bits (375), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 49/248 (19%), Positives = 99/248 (39%), Gaps = 11/248 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGLRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E++ P V    LWQ+SG W+ Y   +       +     R F L P +    
Sbjct: 60  EMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGE-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLVRNELSSYKQLPLNFFQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHTSQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   G +   V+  T       S      A++    ++ +  +     I
Sbjct: 174 YDAMYAAYSRIFSRMGLDFRAVQADTGSIGGNASHEFQVLAQSGEDDIVFSDVSDYAANI 233

Query: 464 NTGVLLGE 471
                +  
Sbjct: 234 ELAEAIAP 241


>gi|313887818|ref|ZP_07821498.1| proline--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
 gi|312846161|gb|EFR33542.1| proline--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
          Length = 567

 Score =  149 bits (375), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 45/221 (20%), Positives = 92/221 (41%), Gaps = 11/221 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +       +++E   H+ L R   +    +  SGV  +   G++  + + + +R +
Sbjct: 4   SKLYMPTLREDPQDAEIASHKFLLRAGMIR---KSASGVYTYLPLGYRSIRKIENIVRDE 60

Query: 287 IK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      EI    +    +W++SG W+ +   MF ++  +D     R F L P       
Sbjct: 61  MDKAGAMEILMSAIQPAEIWKESGRWEKFGPEMFKLRDRND-----REFCLGPTAEEYFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT-KEQMFNEC 404
            +    +KSY++LP+ L +  + YR+E      G+ R R F+  DA+ F T  E +    
Sbjct: 116 TLIRDEVKSYKDLPLNLYQIQTKYRDEKRPRF-GINRAREFSMKDAYTFDTSPETLHTAY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
           + ++     I+     +  +V+         GS      +E
Sbjct: 175 MNMYEAYEKIFDRLELDYKIVEGDNGAMGGTGSHEFIALSE 215



 Score = 70.6 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 59/153 (38%), Gaps = 8/153 (5%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL---SPIQ 554
           +        NA Y++ + +  +   +     G       ++ +N   N  +W    +P +
Sbjct: 412 LGTKYSEALNATYLDENGKANY-FYMGSYGVGVTRSVTAVIEQNHDDNGIIWPISVAPYE 470

Query: 555 AIVTTITSSAVEYA---QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
           AIVT + +   E     ++I   L++  + +  D R E    K ++  +  IP+ I CG 
Sbjct: 471 AIVTIVNTKDEEQVALGEKIYKELEAKGVEVLLDDRKERPGVKFKDRDLIGIPLRITCGK 530

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K      +           ++S  +AI  +  E
Sbjct: 531 KSGES-IVEYSTRREMENSEISADEAIKNILSE 562


>gi|227122|prf||1614347A Pro-tRNA synthetase
          Length = 572

 Score =  149 bits (375), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 50/249 (20%), Positives = 99/249 (39%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTLKETPADAEVISHQLIVRAGMIRKLA---SGLYTWLPTGVRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E++ P V    LWQ+SG W+ Y   +       +     R F L P +    
Sbjct: 60  EMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGE-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHTSQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   G +   V+  T       S      A++    V+ +  +     I
Sbjct: 174 YDAMYAAYSKIFSRMGLDFRAVQADTGSIGGQASHEFQVLAQSGEDDVVFSDTSDYAANI 233

Query: 464 NTGVLLGEG 472
                +   
Sbjct: 234 ELAEAIAPK 242



 Score = 86.8 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 58/177 (32%), Gaps = 11/177 (6%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           P  +   +  I R  + G I Q+         A             M    +   + R +
Sbjct: 395 PSPDGQGRLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGCTGI--GVTRVV 452

Query: 536 GIMIENFKGN----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDFR 587
              IE          P  ++P Q  +  +         E A+++ + L++  + +  D R
Sbjct: 453 AAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLLDDR 512

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            E       +  +  IP  I+ GD+      I  +   +   Q +   D +  L K+
Sbjct: 513 KERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVEYLVKQ 569


>gi|22126985|ref|NP_670408.1| prolyl-tRNA synthetase [Yersinia pestis KIM 10]
 gi|45442549|ref|NP_994088.1| prolyl-tRNA synthetase [Yersinia pestis biovar Microtus str. 91001]
 gi|108806542|ref|YP_650458.1| prolyl-tRNA synthetase [Yersinia pestis Antiqua]
 gi|108813091|ref|YP_648858.1| prolyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|149366930|ref|ZP_01888963.1| prolyl-tRNA synthetase [Yersinia pestis CA88-4125]
 gi|162418775|ref|YP_001607747.1| prolyl-tRNA synthetase [Yersinia pestis Angola]
 gi|165927072|ref|ZP_02222904.1| prolyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165939831|ref|ZP_02228371.1| prolyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|166011913|ref|ZP_02232811.1| prolyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166211331|ref|ZP_02237366.1| prolyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167400131|ref|ZP_02305649.1| prolyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167419446|ref|ZP_02311199.1| prolyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167425324|ref|ZP_02317077.1| prolyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|167470133|ref|ZP_02334837.1| prolyl-tRNA synthetase [Yersinia pestis FV-1]
 gi|218928237|ref|YP_002346112.1| prolyl-tRNA synthetase [Yersinia pestis CO92]
 gi|229837776|ref|ZP_04457936.1| prolyl-tRNA synthetase [Yersinia pestis Pestoides A]
 gi|229840998|ref|ZP_04461157.1| prolyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229843099|ref|ZP_04463249.1| prolyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229903534|ref|ZP_04518647.1| prolyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|270487315|ref|ZP_06204389.1| proline--tRNA ligase [Yersinia pestis KIM D27]
 gi|294503084|ref|YP_003567146.1| prolyl-tRNA synthetase [Yersinia pestis Z176003]
 gi|116256081|sp|Q7CH25|SYP_YERPE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|123246276|sp|Q1CFH2|SYP_YERPN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|123372686|sp|Q1CAK9|SYP_YERPA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226701361|sp|A9R371|SYP_YERPG RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|21960030|gb|AAM86659.1|AE013912_3 proline tRNA synthetase [Yersinia pestis KIM 10]
 gi|45437414|gb|AAS62965.1| prolyl-tRNA synthetase [Yersinia pestis biovar Microtus str. 91001]
 gi|108776739|gb|ABG19258.1| prolyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|108778455|gb|ABG12513.1| prolyl-tRNA synthetase [Yersinia pestis Antiqua]
 gi|115346848|emb|CAL19734.1| prolyl-tRNA synthetase [Yersinia pestis CO92]
 gi|149290544|gb|EDM40620.1| prolyl-tRNA synthetase [Yersinia pestis CA88-4125]
 gi|162351590|gb|ABX85538.1| prolyl-tRNA synthetase [Yersinia pestis Angola]
 gi|165912234|gb|EDR30871.1| prolyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|165920968|gb|EDR38192.1| prolyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165989179|gb|EDR41480.1| prolyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166207102|gb|EDR51582.1| prolyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166962187|gb|EDR58208.1| prolyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167050839|gb|EDR62247.1| prolyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167055724|gb|EDR65508.1| prolyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|229679304|gb|EEO75407.1| prolyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|229689975|gb|EEO82034.1| prolyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229697364|gb|EEO87411.1| prolyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229704153|gb|EEO91165.1| prolyl-tRNA synthetase [Yersinia pestis Pestoides A]
 gi|262361122|gb|ACY57843.1| prolyl-tRNA synthetase [Yersinia pestis D106004]
 gi|262365363|gb|ACY61920.1| prolyl-tRNA synthetase [Yersinia pestis D182038]
 gi|270335819|gb|EFA46596.1| proline--tRNA ligase [Yersinia pestis KIM D27]
 gi|294353543|gb|ADE63884.1| prolyl-tRNA synthetase [Yersinia pestis Z176003]
 gi|320014203|gb|ADV97774.1| prolyl-tRNA synthetase [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 572

 Score =  149 bits (375), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 52/259 (20%), Positives = 98/259 (37%), Gaps = 15/259 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTQKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGVRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E++ P V    LWQ+SG W+ Y   +       +     R F L P +    
Sbjct: 60  EMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGE-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLIRGEINSYKQLPLNFFQIQTKFRDEVRPRF-GVMRAREFLMKDAYSFHTTQESLQET 173

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG---SDALWDDAENIMKGVLDTIKNSSQD 461
                   S  K F    +  +        +G   S      AE+    ++ +  +    
Sbjct: 174 YDAMYTAYS--KIFSRMDLNFRAVLADTGSIGGSASHEFQVLAESGEDDIVFSTGSDYAA 231

Query: 462 RINTGVLLGEGAFYGPKFE 480
            I     L       P  E
Sbjct: 232 NIEFAEALAPTEPRAPATE 250



 Score = 85.2 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 56/168 (33%), Gaps = 13/168 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           I R  + G I Q+         A             ++    +G  + R +   IE    
Sbjct: 405 IKRGIEVGHIFQLGTKYSEVMKATVQGEDG---RNQVMTMGCYGIGVSRVVAAAIEQNHD 461

Query: 545 N----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +     P  ++P Q  +  +         E A+E+   L+SH + +  D R E       
Sbjct: 462 DRGIIWPDAIAPFQVAILPMNMHKSFRVKELAEELYTTLRSHGIDVILDDRKERPGVMFA 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  +  +P  I+ GD+      +  +       Q +   + +  L  +
Sbjct: 522 DMELIGVPHNIVIGDRNLDSEEVEYKNRRVGEKQMIKTSEIVEFLLSQ 569


>gi|309783049|ref|ZP_07677768.1| proline--tRNA ligase [Ralstonia sp. 5_7_47FAA]
 gi|308918157|gb|EFP63835.1| proline--tRNA ligase [Ralstonia sp. 5_7_47FAA]
          Length = 574

 Score =  149 bits (375), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 47/221 (21%), Positives = 91/221 (41%), Gaps = 11/221 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       ++E   H+ + R   +  +   G+G+  +   G ++ + +   +R 
Sbjct: 3   ASQFFISTLKEAPADAEIVSHKLMMRAGMIKKL---GAGLYTYMPVGLRVIRKVEQIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LWQ++G WD     +   K      +  R F ++P +    
Sbjct: 60  EMNAAGAVEVLMPVVQPGELWQETGRWDKMGDELLRFKD-----RHERDFVMQPTSEEVV 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
             +    ++SY++LPV   +  + +R+E      G+MR R FT  DA+ F    E +   
Sbjct: 115 TDIARTEIRSYKQLPVNFYQIQTKFRDERRPRF-GIMRGREFTMKDAYSFDRDAEGLKVS 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
             K+++    I++ FG E   V          GS      A
Sbjct: 174 YQKMYDAYTRIFQRFGLEFRAVAADNGAIGGSGSHEFHVIA 214



 Score = 89.8 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 68/198 (34%), Gaps = 19/198 (9%)

Query: 462 RINTGVLLGEGAFYGPKFEY---ILKDAIGRDWQCGTIQVDFN------LPSRFNAFYVN 512
            +N G  L E   Y  +         D  G    C  I+V              NA +++
Sbjct: 374 GVNWGRDLPEPEVYDLRNVVAGDPSPDGKGTLAVCRGIEVGHVFMLGTRYSEAMNATFLD 433

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTI----TSSA 564
            +  K  P+++     G I R +G  IE          P  ++P Q ++  +    + + 
Sbjct: 434 ENG-KTQPMVMGCYGIG-ITRILGAAIEQNYDARGIIWPASIAPFQVVICPVGYDRSDAV 491

Query: 565 VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRF 624
            E A  +   L +  + +  D R E       +  +  +P  ++ GD+   E  +  +  
Sbjct: 492 REEADRLHAELVAAGIDVMLDDRGERPGAMFADWELIGVPFRVVVGDRGLKEGKLEFQGR 551

Query: 625 GSTTTQKVSLLDAIPILT 642
                  V+  D +  L 
Sbjct: 552 RDEAATAVAPADVLATLK 569


>gi|313665217|ref|YP_004047088.1| proline--tRNA ligase [Mycoplasma leachii PG50]
 gi|312949831|gb|ADR24427.1| proline--tRNA ligase [Mycoplasma leachii PG50]
          Length = 474

 Score =  149 bits (375), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 68/375 (18%), Positives = 140/375 (37%), Gaps = 52/375 (13%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAV 321
           G + +   G++I++ +  Y+  + K  + + +  P ++ + L+ ++  H D +   +  V
Sbjct: 36  GTMIFRPYGYRIWELIQKYLDEEFKKVNVDNVYFPLLIPESLFNKEKDHIDGFSPEIATV 95

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
                  K      ++P +    +  F++ + SYR+LP+   ++ +V R E   +    +
Sbjct: 96  TRVGQK-KLEENLFIRPTSEVLMMDYFSNEINSYRDLPLIYNQWCNVMRWEK--TTRPFL 152

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALW 441
           R   F   + H   +    +NE       I+ IY+ F                       
Sbjct: 153 RTIEFLWQEGHTVHS---SYNEAENFCLKILDIYEKF----------------------- 186

Query: 442 DDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFN 501
             A+ ++   +   K + +++         GA      E ++ D  G+  QCGT     +
Sbjct: 187 --AKEVLLLPVICGKKTEKEKF-------AGAKDTYTIESLMFD--GQALQCGTSHFFAD 235

Query: 502 LPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP------IQA 555
             ++   + +   +++      +   +G   R IG +I     +  L L        IQ 
Sbjct: 236 NFTK--VYDIKFQNKENKLEHAYSTSWGVSTRLIGALIMTHSDDNGLVLPSKIAPIQIQI 293

Query: 556 IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEAS 615
           I         +  + I   L      I+ D  +++  +KI E  IK IPI I  G ++  
Sbjct: 294 IQIKNIEQIDQVVENIKEKLSD--YRIDVDNSDKSFGFKISEAEIKGIPIRIEIGPRDLE 351

Query: 616 ERSIGIRRFGSTTTQ 630
              I I R      +
Sbjct: 352 NNQITISRRDQQENK 366


>gi|146295842|ref|YP_001179613.1| prolyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
 gi|166980111|sp|A4XHN7|SYP_CALS8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|145409418|gb|ABP66422.1| prolyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
          Length = 572

 Score =  149 bits (375), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 51/262 (19%), Positives = 109/262 (41%), Gaps = 22/262 (8%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
           +        ++E   H+ + R   +  ++   SG+  +   G+++ + + + +R ++   
Sbjct: 8   MPTMKETPSDAEIESHKLMLRSGFMRQLS---SGIYVYLPLGYRVLRKIENIVREEMDRA 64

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
             +E++   ++ + LW++SG W  +   MF +K  ++     R + L P +      +  
Sbjct: 65  GAQEVHMSALMPKELWEESGRWAVFGPEMFKIKDRNE-----REYCLGPTHEEAFTYIVR 119

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIH 408
           + + SYR+LP  L +  + +R+E      G+MR R FT  DA+ F   E+  +    K++
Sbjct: 120 NEVTSYRDLPKILYQIQTKFRDERRPRF-GVMRCREFTMKDAYSFDMNEEGLDISYKKMY 178

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALW-----DDAENIMKGV------LDTIKN 457
           +  + I+K  G +  +V+  T       S          +AE            L+  + 
Sbjct: 179 DAYVRIFKRCGLDVKIVEADTGAMGGSNSHEFMVPSSVGEAEIAYCKACGYAANLEKAEC 238

Query: 458 SSQDRINTGVLLGEGAFYGPKF 479
             +   NT  +      Y P  
Sbjct: 239 LDEPVENTEEIKQMQEVYTPNV 260



 Score = 87.5 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 62/161 (38%), Gaps = 11/161 (6%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G I  +       FN  Y +   EK   +M    +   I R    +IE       
Sbjct: 402 RGIEVGHIFKLGTKYTEAFNCVYTDEKGEKKLMIMGCYGI--GINRTAAAIIEQMHDEDG 459

Query: 546 --LPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              P+ ++P + IV  +        + A EI   L+   + +  D R+E    K ++  +
Sbjct: 460 IIWPITVAPYEVIVVPVNIKDEQQSKIAFEIYEDLQKKGVEVLIDDRDERAGVKFKDADL 519

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
             IP  +  G K  ++  I +R   +  + +V +  A+  +
Sbjct: 520 IGIPFRVTIGRK-IADGRIEVRNRRTKESVEVDIESAVEFI 559


>gi|304312891|ref|YP_003812489.1| Prolyl-tRNA synthetase [gamma proteobacterium HdN1]
 gi|301798624|emb|CBL46856.1| Prolyl-tRNA synthetase [gamma proteobacterium HdN1]
          Length = 574

 Score =  149 bits (375), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 56/304 (18%), Positives = 109/304 (35%), Gaps = 17/304 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L        ++E   H+ + R   +  +A    G+  W   G ++ + +   +R 
Sbjct: 3   ASQYLLATLREDPADAEVISHKLMLRAGMIRRLAA---GLYTWTPTGLRVLRKVERIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +E+  P      LWQ+SG + +Y   +   K      +  R F L P +    
Sbjct: 60  EMDRAGAQEVLMPVTQPAELWQESGRFQAYGPELLRFKD-----RHARDFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + ++SY++LP    +  + +R+E      G+MR R F   D++ F   E    E 
Sbjct: 115 SDLVRNNVQSYKQLPANFYQIQTKFRDETRPRF-GVMRAREFLMKDSYSFHMTEDCLRET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            + ++N   +I+   G E   V   T       S      A      +  + ++     I
Sbjct: 174 YQVMYNAYTAIFTRLGLEFRAVLADTGSIGGNNSHEFHVLASAGEDSIAFSNQSDYAANI 233

Query: 464 NTGVLL----GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
                        A      E    +A   D  C  +QV+ +   +     V+       
Sbjct: 234 EMAEATLIGNERPAPQEALTEVATPNARSIDEVCAQLQVNADQIVK--TLIVHGDGVDGK 291

Query: 520 PVMI 523
           P ++
Sbjct: 292 PNLV 295



 Score = 87.5 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 29/176 (16%), Positives = 59/176 (33%), Gaps = 13/176 (7%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
           P  +   +  I R  + G I Q+        N   ++ + +     ++    +G  + R 
Sbjct: 396 PSPDGKGEILIRRGIEVGHIFQLGTKYSKALNVTVLDENGKSQ---VLPMGCYGIGVSRV 452

Query: 535 IGIMIENFKGN----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDF 586
           +   IE          P  ++P    +  +    +      A+ +   LK     +  D 
Sbjct: 453 VAAAIEQNNDAQGIIWPDAIAPFHIALIPMNQHKSPRVHAAAEALYERLKQAGYEVFYDD 512

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           R E    K  +  +  IP  I+ GD+   ++ +  +      T  V L   +  L 
Sbjct: 513 RKERPGVKFADAELIGIPHRIVIGDRGLDQQQVEYKHRTDKETSDVGLDQLVEFLQ 568


>gi|224533738|ref|ZP_03674326.1| prolyl-tRNA synthetase [Borrelia burgdorferi CA-11.2a]
 gi|224513031|gb|EEF83394.1| prolyl-tRNA synthetase [Borrelia burgdorferi CA-11.2a]
          Length = 488

 Score =  149 bits (375), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 75/431 (17%), Positives = 157/431 (36%), Gaps = 61/431 (14%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
           ++ ++   E+   + +  + ++  L   +     ++     G+ I+  + S + +K K+ 
Sbjct: 1   MSDFIASKEDDYSKWYLDIVQKAKLADYSPVKGCMVI-MPYGYSIWSKIQSILDKKFKET 59

Query: 290 DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
            +E    P ++     + +  H D +      +K A           L+P +      ++
Sbjct: 60  GHENAYFPMLIPYSFLEREKDHIDGFSPEFAIIKDAGGESL-AEPLVLRPTSETIIWNMY 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
           +  +KSYR+LP+++ ++ +V R E        +R   F   + H   T      E L+  
Sbjct: 119 SKWIKSYRDLPLKINQWANVVRWEKR--TRPFLRTTEFLWQEGH---TAHATEEEALEET 173

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
            LI+ +YK F                          E+ +   +   K S +++      
Sbjct: 174 LLILDVYKRF-------------------------IEDYLAIPVFCGKKSEKEKF----- 203

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAV 527
              GA      E +++D   +  Q  T      N    F+  + +   +  H   +  + 
Sbjct: 204 --AGAVSTYSIEALMQD--KKALQAATSHYLGLNFAKAFDVKFQDKDGKMRH---VFASS 256

Query: 528 FGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTT-------ITSSAVEYAQEIANLLK 576
           +G   R IG +I    +     LP  ++PI+ IV         I    ++Y+  + + LK
Sbjct: 257 WGVSTRLIGALIMVHSDEKGLVLPPRIAPIEIIVIPIFKKEDEINKKILDYSDCVVDTLK 316

Query: 577 SHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT--TQKVS 633
                +E D     +  ++      K IPI +  G  +    S+ I R         ++S
Sbjct: 317 KAEFRVEIDKDVRSSPGFRFSSAEFKGIPIRLEVGINDVLLNSVTISRRDKDRKFKYQIS 376

Query: 634 LLDAIPILTKE 644
           L   +  +  E
Sbjct: 377 LDSLVSKVKVE 387


>gi|329905673|ref|ZP_08274169.1| Prolyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480]
 gi|327547550|gb|EGF32358.1| Prolyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480]
          Length = 578

 Score =  149 bits (375), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 49/207 (23%), Positives = 86/207 (41%), Gaps = 11/207 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ + R   +  +   GSG+  +   G ++ + + + +R ++      E+  P 
Sbjct: 17  DAEIVSHQLMMRAGMIKRL---GSGIYTYMPMGLRVIRKVEAIVREEMNRAGAVELLMPV 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    LWQ++G W  Y A +  VK      +  R F ++P +      +    +KSYR+L
Sbjct: 74  VQPAELWQETGRWQEYGAELMRVKD-----RHGRDFIIQPTSEEVITDIARTEIKSYRQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKD 417
           PV      + +R+E      GLMR R FT  DA+ F        +  + + +  + I+  
Sbjct: 129 PVNFYHVQTKFRDERRPRF-GLMRGREFTMKDAYSFDRDPAGMKQSYQIMFDAYVRIFTR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDA 444
           FG     V          GS      A
Sbjct: 188 FGLGFRPVAADNGAIGGSGSHEFHVIA 214



 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/151 (17%), Positives = 57/151 (37%), Gaps = 13/151 (8%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NF 542
           AI R  + G + Q+         A +++ + +   P ++    +G  + R +G  IE NF
Sbjct: 410 AIQRGIEVGHVFQLGTRYSEDMKATFLDENGK---PQLLQMGCYGIGVTRILGAAIEQNF 466

Query: 543 KGNLPLWL---SPIQAIVTTITSSAVEYAQEIANLLKS----HHLSIETDFRNETINYKI 595
                +W    +P + ++  +     E  +  A+ L +      +    D R E      
Sbjct: 467 DDKGIIWPVSIAPFEIVLCPMGYDRNEAVKTAADTLLADLLAAGIDAILDDRGERPGAMF 526

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGS 626
            +  +  +P  I+ GD+   +  +  +    
Sbjct: 527 ADWELIGVPHRIVIGDRGLKDGKLEYQGRRE 557


>gi|271501814|ref|YP_003334840.1| prolyl-tRNA synthetase [Dickeya dadantii Ech586]
 gi|270345369|gb|ACZ78134.1| prolyl-tRNA synthetase [Dickeya dadantii Ech586]
          Length = 572

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 46/218 (21%), Positives = 90/218 (41%), Gaps = 12/218 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYMLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGLRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    EI+ P V    LWQ+SG W+ Y   +       D     R F L P +    
Sbjct: 60  EMNNAGAIEISMPVVQPADLWQESGRWEQYGPELLRFVDRGD-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + + SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++     
Sbjct: 115 TDLIRNEISSYKQLPLNFYQIQTKFRDEVRPRF-GVMRAREFLMKDAYSFHTTQESLQVT 173

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWD 442
                +  +  K F    +  +        +G +A  +
Sbjct: 174 YDA--MYAAYGKIFSRMDLDFRPVQADTGSIGGNASHE 209



 Score = 86.4 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 53/168 (31%), Gaps = 11/168 (6%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           I R  + G I Q+         A             M    +   + R I   IE    +
Sbjct: 405 IKRGIEVGHIFQLGKKYSEALKATVQGEDGRNQTLTMGCYGI--GVTRVIAAAIEQNHDD 462

Query: 546 ----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
                P  ++P Q  +  +         E A+ I   L+++ + +  D R E       +
Sbjct: 463 RGIIWPDAIAPFQVAILPMNMHKSFRVQEVAEGIYQQLRANGIDVLLDDRKERPGVMFAD 522

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
             +  IP  I+ GD+      I  +       + +   D +  L  + 
Sbjct: 523 MELIGIPHTIVIGDRNLDNDEIEYKHRRKGEKEMIKAGDIVEFLLSQC 570


>gi|293390782|ref|ZP_06635116.1| prolyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D7S-1]
 gi|290951316|gb|EFE01435.1| prolyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D7S-1]
          Length = 571

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 51/249 (20%), Positives = 99/249 (39%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  L+       E+    H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSKYLLSTLKETPAEAAVVSHQLMLRAGMIRPLA---SGLYNWLPTGLRVLKKVENIIRD 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LWQ+SG W+ Y   +   +   +     R F L P +    
Sbjct: 60  EMNKSGAIEVEMPVVQPAELWQESGRWEQYGPELLRFEDRGN-----RNFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SYR+LP+ L +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLVRREVSSYRQLPLNLYQIQTKFRDEVRPRF-GVMRGREFLMKDAYSFHTSKESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++    +I+   G +   V+  T       S      A +    V+ + ++     I
Sbjct: 174 YDVMYQTYSNIFTRLGLDFRAVQADTGSIGGSASHEFQVLANSGEDDVIFSTESDYAANI 233

Query: 464 NTGVLLGEG 472
                +  G
Sbjct: 234 ELAEAVAVG 242



 Score = 90.6 bits (223), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 26/169 (15%), Positives = 63/169 (37%), Gaps = 14/169 (8%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           I R  + G I Q+        NA           P+++    +G  + R +   IE +  
Sbjct: 403 IKRGIEVGHIFQLGDKYSQAMNATVQGEDG---RPMVVTMGCYGIGVTRVVAAAIEQHHD 459

Query: 544 GNLPLWL----SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
               +W     +P    +  +    + S  ++A+++   L++  + +  D R E      
Sbjct: 460 ERGIIWPSDAIAPFTVAIVPMNMYKSESVQQFAEDLYRTLQAQGVEVIFDDRKERPGVMF 519

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            +  +  +P +++ G+K  +   I  +   +   Q ++    +  L  +
Sbjct: 520 ADMELIGVPHMVVIGEKNLANGEIEYKNRRTGEKQMIAKAQLLDFLKSQ 568


>gi|257125504|ref|YP_003163618.1| prolyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
 gi|257049443|gb|ACV38627.1| prolyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
          Length = 570

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 52/240 (21%), Positives = 101/240 (42%), Gaps = 11/240 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  L  Y    +E++   H+ + R    F I +   GV  +   G+++ + + +  R +
Sbjct: 4   SKAFLKTYKEAPKEAQIVSHQLMLRA---FMINQLTRGVYTYLPFGYRVLKKIENITREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E+  P +    LW++SG W +Y   +  +K  ++     R F+L P +     
Sbjct: 61  MDRAGAQELLMPVLQPASLWEESGRWFAYGPELMRLKDRNE-----REFSLGPTHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNEC 404
            V    + SY+ELP  + +  + +R+E      GLMR R F   D + F  T+E +  E 
Sbjct: 116 DVVRDSISSYKELPFNVYQIQTKFRDEMRPRF-GLMRGREFVMKDGYSFHLTQESLDEEY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
           L + +    I++  G     V+  T       S      AE+    +L +  +     + 
Sbjct: 175 LNMKDTYSRIFERMGLNYRAVEADTGSIGGDASHEFMVLAESGEDDILYSDSSDYAANVE 234



 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 59/162 (36%), Gaps = 9/162 (5%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN--- 545
           R  + G I       S+     V   + K   + +     G + R I   IE        
Sbjct: 407 RGIEVGHIFKLGEKYSKALNATVLDENGKQQFIKMGCYGMG-MSRIISAAIEQNHDEYGI 465

Query: 546 -LPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             P  ++P    V        + V   +++ N L  + +    D RNE   +K ++  + 
Sbjct: 466 IWPKAIAPYHVDVIIANMKDETQVNIGEKLYNELNQNKIETVLDDRNERAGFKFKDADLI 525

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             P+ I+ G K A++  + ++   +  +  V + + +  +  
Sbjct: 526 GFPLKIVVG-KGAADGIVEVKDRKTGESTDVKVEEVLNFVKN 566


>gi|300715419|ref|YP_003740222.1| Prolyl-tRNA synthetase [Erwinia billingiae Eb661]
 gi|299061255|emb|CAX58364.1| Prolyl-tRNA synthetase [Erwinia billingiae Eb661]
          Length = 572

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 51/249 (20%), Positives = 99/249 (39%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            TQ  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TTQYLLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGLRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    EI+ P V    LWQ+SG W+ Y   +       D     R F L P +    
Sbjct: 60  EMNNAGAIEISMPVVQPADLWQESGRWEQYGPELLRFVDRGD-----RPFVLGPTHEEVV 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+ + +  + +R+E      G+MR R F   DA+ F   ++     
Sbjct: 115 TDLIRNELSSYKQLPLNVFQIQTKFRDEVRPRF-GVMRSREFIMKDAYSFHASQESLQAT 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++      +K  G +   V+  T       S      A++    V+ + ++     I
Sbjct: 174 YDDMYRAYSQSFKRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVIFSTESDYAANI 233

Query: 464 NTGVLLGEG 472
                +   
Sbjct: 234 EFAEAVAPA 242



 Score = 88.7 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 54/168 (32%), Gaps = 13/168 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           I R  + G I Q+         A             ++    +G  I R +   IE    
Sbjct: 405 IKRGIEVGHIFQLGTKYSEAMKASVQGEDG---RNQILTMGCYGIGITRIVAASIEQNHD 461

Query: 545 N----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                 P  L+P Q  +  +         E A+E+   L++  + +  D R E       
Sbjct: 462 ERGIIWPAALAPFQVAILPMNMHKSFRVKELAEELYAQLRAKGIDVILDDRKERPGVMFA 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  +  +P  I+ GD+      +  +       + +   + +  L  E
Sbjct: 522 DMELIGVPHTIVIGDRNLDSEEVEYKSRREGEKRMIKTGEILDFLVSE 569


>gi|261867437|ref|YP_003255359.1| prolyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D11S-1]
 gi|261412769|gb|ACX82140.1| prolyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D11S-1]
          Length = 571

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 51/249 (20%), Positives = 99/249 (39%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  L+       E+    H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSKYLLSTLKETPAEAAVVSHQLMLRAGMIRPLA---SGLYNWLPTGLRVLKKVENIIRD 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LWQ+SG W+ Y   +   +   +     R F L P +    
Sbjct: 60  EMNKSGAIEVEMPVVQPAELWQESGRWEQYGPELLRFEDRGN-----RNFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SYR+LP+ L +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLVRREVSSYRQLPLNLYQIQTKFRDEVRPRF-GVMRGREFLMKDAYSFHTSKESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++    +I+   G +   V+  T       S      A +    V+ + ++     I
Sbjct: 174 YDVMYQTYSNIFTRLGLDFRAVQADTGSIGGSASHEFQVLANSGEDDVIFSTESDYAANI 233

Query: 464 NTGVLLGEG 472
                +  G
Sbjct: 234 ELAEAVAVG 242



 Score = 90.6 bits (223), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 26/169 (15%), Positives = 63/169 (37%), Gaps = 14/169 (8%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           I R  + G I Q+        NA           P+++    +G  + R +   IE +  
Sbjct: 403 IKRGIEVGHIFQLGDKYSQTMNATVQGEDG---RPMVVTMGCYGIGVTRVVAAAIEQHHD 459

Query: 544 GNLPLWL----SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
               +W     +P    +  +    + S  ++A+++   L++  + +  D R E      
Sbjct: 460 ERGIIWPSDAIAPFSVAIVPMNMYKSESVQQFAEDLYRTLQAQGVEVIFDDRKERPGVMF 519

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            +  +  +P +++ G+K  +   I  +   +   Q ++    +  L  +
Sbjct: 520 ADMELIGVPHMVVIGEKNLANGEIEYKNRRTGEKQMIAKAQLLDFLKSQ 568


>gi|221217681|ref|ZP_03589149.1| prolyl-tRNA synthetase [Borrelia burgdorferi 72a]
 gi|221192358|gb|EEE18577.1| prolyl-tRNA synthetase [Borrelia burgdorferi 72a]
          Length = 488

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 75/423 (17%), Positives = 153/423 (36%), Gaps = 61/423 (14%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           E+   + +  + ++  L   +     ++     G+ I+  + S + +K K+  +E    P
Sbjct: 9   EDDYSKWYLDIVQKAKLADYSPVKGCMVI-MPYGYSIWSKIQSILDKKFKETGHENAYFP 67

Query: 298 QVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
            ++     + +  H D +      +K A           L+P +      +++  +KSYR
Sbjct: 68  MLIPYSFLEREKDHIDGFSPEFAIIKDAGGESL-AEPLVLRPTSETIIWNMYSKWIKSYR 126

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +LP+++ ++ +V R E        +R   F   + H   T      E L+   LI+ +YK
Sbjct: 127 DLPLKINQWANVVRWEKR--TRPFLRTTEFLWQEGH---TAHATEEEALEETLLILDVYK 181

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
            F                          E+ +   +   K S +++         GA   
Sbjct: 182 RF-------------------------IEDYLAIPVFCGKKSEKEKF-------AGAVST 209

Query: 477 PKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
              E +++D   +  Q  T      N    F+  + +   +  H   +  + +G   R I
Sbjct: 210 YSIEALMQD--KKALQAATSHYLGLNFAKAFDVKFQDKDGKMRH---VFASSWGVSTRLI 264

Query: 536 GIMI----ENFKGNLPLWLSPIQAIVTT-------ITSSAVEYAQEIANLLKSHHLSIET 584
           G +I    +     LP  ++PI+ IV         I    ++Y+  + + LK     +E 
Sbjct: 265 GALIMVHSDEKGLVLPPRIAPIEIIVIPIFKKEDEINKKILDYSDCVVDALKKAEFRVEI 324

Query: 585 DFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT--TQKVSLLDAIPIL 641
           D     +  ++      K IPI +  G  +    S+ I R         ++SL   +  +
Sbjct: 325 DKDVRSSPGFRFSSAEFKGIPIRLEVGINDVLLNSVTISRRDKDRKFKYQISLDSLVSKV 384

Query: 642 TKE 644
             E
Sbjct: 385 KVE 387


>gi|52308170|gb|AAU38670.1| ProS protein [Mannheimia succiniciproducens MBEL55E]
          Length = 589

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 49/252 (19%), Positives = 100/252 (39%), Gaps = 13/252 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++   +       +++   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 21  TSKYLFSTLKETPNDAQVVSHQLMLRAGMIRPMA---SGLYNWLPSGIRVLEKVKNIIRE 77

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LWQ+SG W+ Y   +       +     R F L P +    
Sbjct: 78  EMNKSGAIEVLMPVVQPAELWQESGRWEQYGLELLRFNDRGN-----RDFVLGPTHEEVI 132

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP+ L +  + +R+E      G+MR R F   DA+ F T ++     
Sbjct: 133 TDLVRREVSSYKQLPLNLYQIQTKFRDEVRPRF-GVMRSREFIMKDAYSFHTTKESLQAT 191

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++    +I+   G +   V+  T       S      A +    V+ + ++     I
Sbjct: 192 YDVMYQTYSNIFTRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVFSTESDYAANI 251

Query: 464 N--TGVLLGEGA 473
                + +GE A
Sbjct: 252 ELAEAIAVGERA 263



 Score = 91.4 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 61/167 (36%), Gaps = 14/167 (8%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           I R  + G I Q+        NA       +   P+++    +G  + R +   IE +  
Sbjct: 421 IKRGIEVGHIFQLGQKYSEAMNATVQGEDGK---PLVMTMGCYGIGVTRVVASAIEQHHD 477

Query: 544 GNLPLWL----SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
               +W     +P    +  +    + S   YA+E+   L +  + +  D R E      
Sbjct: 478 ERGIIWPSDAIAPFTVAIVPMNMHKSESVQAYAEELYQTLLAQGVEVIFDDRKERPGVMF 537

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +  +  +P ++I G+K      I  +   ++  Q ++    +  L 
Sbjct: 538 ADMELIGVPHMVIIGEKNLENGEIEYKNRRTSEKQMIAKDQLLDFLK 584


>gi|145588388|ref|YP_001154985.1| prolyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|189083506|sp|A4SVA7|SYP_POLSQ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|145046794|gb|ABP33421.1| prolyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
          Length = 580

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 44/208 (21%), Positives = 85/208 (40%), Gaps = 11/208 (5%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
            ++E   H+ + R   +  I+    G+  +   G K+ + + + +R ++      E+  P
Sbjct: 16  SDAEVVSHKLMVRAGLIRKISA---GIYNYLPLGLKVIRKVENIIREEMNRAGAIELLMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LWQ++G W+     +  +K   D     R F ++P +      +  + ++SY++
Sbjct: 73  MIQPAELWQETGRWEKMGPELLRIKDRHD-----RDFLIQPTSEEVITDLARNEIRSYKQ 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYK 416
           LPV   +  + +R+E      G+MR R F+  DA+ F    E +      +      I+K
Sbjct: 128 LPVNFYQIQTKFRDERRPRF-GIMRGREFSMKDAYSFDRDTEGLKKSYQTMFEAYTQIFK 186

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDA 444
             G E   V          GS      A
Sbjct: 187 RMGLEFRAVTADNGAIGGSGSQEFHVIA 214



 Score = 88.3 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 24/162 (14%), Positives = 59/162 (36%), Gaps = 11/162 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G + Q+           Y++    K  P+++     G   R +G  IE       
Sbjct: 409 RGIEVGHVFQLGTRYSEAMGCTYLDQQG-KAQPMVMGCYGIGVT-RLLGAAIEQGHDERG 466

Query: 546 --LPLWLSPIQAIVTTITSSAVEY----AQEIANLLKSHHLSIETDFRNETINYKIREHS 599
              P+ ++P++ ++  +     E       ++ + L +  + +  D RNE       +  
Sbjct: 467 IIWPISMAPVEVVICPMGYEKSEPVKAACDQLHDELVAAGIDVILDDRNERPGAMFADWE 526

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           +   P  ++ GD+  ++  +  +      +Q + L      +
Sbjct: 527 LIGAPFRVVIGDRGLADSQVEFKGRTDADSQNIPLAQIKEKV 568


>gi|88860213|ref|ZP_01134852.1| prolyl-tRNA synthetase [Pseudoalteromonas tunicata D2]
 gi|88818207|gb|EAR28023.1| prolyl-tRNA synthetase [Pseudoalteromonas tunicata D2]
          Length = 573

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 51/245 (20%), Positives = 97/245 (39%), Gaps = 11/245 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L        ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYILATLKEVPSDAEIISHQLMLRAGMIRRLA---SGLYTWLPSGLRVLRKVEAIVRD 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           +++     E+  P +    LW +SG W+ +   +  +K      +  R FAL P +    
Sbjct: 60  EMEKAGAIEMLMPVIQPADLWIESGRWEQFGPELLRIKD-----RHNREFALGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNE 403
                  + SY++LP+ L +  +  R+E      G+MR R FT  DA+ F  + E + N 
Sbjct: 115 TEFVRKEVSSYKQLPLNLFQIQTKVRDEVRPRF-GVMRAREFTMKDAYSFHLSDECLANT 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +H    ++++  G E   V   T       S      AE+    +  +  +     I
Sbjct: 174 YAIMHQAYCNVFERIGLEYRPVIADTGSIGGSVSHEFHVLAESGEDAIAFSSGSDYAANI 233

Query: 464 NTGVL 468
                
Sbjct: 234 EKAEA 238



 Score = 71.7 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 55/170 (32%), Gaps = 16/170 (9%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENF- 542
           +I R  + G I Q+        +A      +E     ++    +G  + R +   IE   
Sbjct: 406 SIKRGIEVGHIFQLGTKYS---DAMKAGVLNETGKNQIMTMGCYGIGVSRIVAAAIEQNF 462

Query: 543 ---KGNLPLWLSPIQAIVTTITSSAVEY----AQEIANLLKSHHLSIETDFRNETINYKI 595
                  P  ++P Q  +  +           A+ I   LK+  + +  D R E      
Sbjct: 463 DAKGIVWPKAIAPFQIAIVPMNMHKSHRIPAVAERIYQELKAAGIEVLFDDRKERPGVMF 522

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ---KVSLLDAIPILT 642
            +  +  IP  ++ G++   +  +  +              + + I  + 
Sbjct: 523 NDMELIGIPHTLVIGERNLDDNCVEYKSRSGENAMYNLDTVVAELIAKIR 572


>gi|195942244|ref|ZP_03087626.1| prolyl-tRNA synthetase [Borrelia burgdorferi 80a]
          Length = 488

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 75/423 (17%), Positives = 153/423 (36%), Gaps = 61/423 (14%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           E+   + +  + ++  L   +     ++     G+ I+  + S + +K K+  +E    P
Sbjct: 9   EDDYSKWYLDIVQKAKLADYSPVKGCMVI-MPYGYSIWSKIQSILDKKFKETGHENAYFP 67

Query: 298 QVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
            ++     + +  H D +      +K A           L+P +      +++  +KSYR
Sbjct: 68  MLIPYSFLEREKDHIDGFSPEFAIIKDAGGESL-AEPLVLRPTSETIIWNMYSKWIKSYR 126

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +LP+++ ++ +V R E        +R   F   + H   T      E L+   LI+ +YK
Sbjct: 127 DLPLKINQWANVVRWEKR--TRPFLRTTEFLWQEGH---TAHATEEEALEETLLILDVYK 181

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
            F                          E+ +   +   K S +++         GA   
Sbjct: 182 RF-------------------------IEDYLAIPVFCGKKSEKEKF-------AGAVST 209

Query: 477 PKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
              E +++D   +  Q  T      N    F+  + +   +  H   +  + +G   R I
Sbjct: 210 YSIEALMQD--KKALQAATSHYLGLNFAKAFDVKFQDKDGKMRH---VFASSWGVSTRLI 264

Query: 536 GIMI----ENFKGNLPLWLSPIQAIVTT-------ITSSAVEYAQEIANLLKSHHLSIET 584
           G +I    +     LP  ++PI+ IV         I    ++Y+  + + LK     +E 
Sbjct: 265 GALIMVHSDEKGLVLPPRIAPIEIIVIPIFKKEDEINKKILDYSDCVVDALKKAEFRVEI 324

Query: 585 DFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT--TQKVSLLDAIPIL 641
           D     +  ++      K IPI +  G  +    S+ I R         ++SL   +  +
Sbjct: 325 DKDVRSSPGFRFSSAEFKGIPIRLEVGINDVLLNSVTISRRDKDRKFKYQISLDSLVSKV 384

Query: 642 TKE 644
             E
Sbjct: 385 KVE 387


>gi|251793646|ref|YP_003008376.1| prolyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
 gi|247535043|gb|ACS98289.1| hypothetical protein NT05HA_1971 [Aggregatibacter aphrophilus
           NJ8700]
          Length = 571

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 53/252 (21%), Positives = 101/252 (40%), Gaps = 13/252 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++   +       E+    H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSKYLFSTLKETPAEAAVVSHQLMLRAGMIRPLA---SGLYNWLPTGLRVLKKVENIIRD 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LWQ+SG W+ Y   +   +   +     R F L P +    
Sbjct: 60  EMNKSGAIEVEMPVVQPAELWQESGRWEQYGPELLRFEDRGN-----RNFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SYR+LP+ L +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLVRREVSSYRQLPLNLYQIQTKFRDEVRPRF-GVMRGREFLMKDAYSFHTSKESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++    +I+   G +   V+  T       S      A +    V+ + ++     I
Sbjct: 174 YDVMYQTYSNIFSRLGLDFRAVQADTGSIGGSASHEFQVLANSGEDDVIFSTESDYAANI 233

Query: 464 N--TGVLLGEGA 473
                V +GE A
Sbjct: 234 ELAEAVAIGERA 245



 Score = 90.2 bits (222), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 27/169 (15%), Positives = 63/169 (37%), Gaps = 14/169 (8%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           I R  + G I Q+        NA           P+++    +G  + R +   IE +  
Sbjct: 403 IKRGIEVGHIFQLGDKYSKAMNATVQGEDG---RPMVLTMGCYGIGVTRVVAAAIEQHHD 459

Query: 544 GNLPLW----LSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
               +W    ++P    +  +    + S  E+A+++   L +  + +  D R E      
Sbjct: 460 ERGIIWPCDEMAPFTVAIVPMNMHKSESVQEFAEDLYRTLLAQGVEVIFDDRKERPGVMF 519

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            +  +  +P +++ G+K  +   I  +   +   Q ++    +  L  +
Sbjct: 520 ADMELIGVPHMVVIGEKNLANGEIEYKNRRTGEKQMIAKDQLLDFLKSQ 568


>gi|48783|emb|CAA39134.1| ProRS [Escherichia coli]
 gi|147362|gb|AAA24420.1| prolyl-tRNA synthetase [Escherichia coli]
          Length = 572

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 50/249 (20%), Positives = 99/249 (39%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTLKETPADAEVISHQLIVRAGMIRKLA---SGLYTWLPTGVRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E++ P V    LWQ+SG W+ Y   +       +     R F L P +    
Sbjct: 60  EMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGE-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHTSQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   G +   V+  T       S      A++    V+ +  +     I
Sbjct: 174 YDAMYAAYSKIFSRMGLDFRAVQADTGSIGGQASHEFQVLAQSGEDDVVFSDTSDYAANI 233

Query: 464 NTGVLLGEG 472
                +   
Sbjct: 234 ELAEAIAPK 242



 Score = 87.1 bits (214), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 60/178 (33%), Gaps = 13/178 (7%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
           P  +   +  I R  + G I Q+         A             ++    +G  + R 
Sbjct: 395 PSPDGQGRLLIKRGIEVGHIFQLGTKYSEALKASVQGEDG---RNQILTMGCYGIGVTRV 451

Query: 535 IGIMIENFKGN----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDF 586
           +   IE          P  ++P Q  +  +         E A+++ + L++  + +  D 
Sbjct: 452 VAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLLDD 511

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R E       +  +  IP  I+ GD+      I  +   +   Q +   D +  L K+
Sbjct: 512 RKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVEYLVKQ 569


>gi|330839271|ref|YP_004413851.1| Prolyl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
 gi|329747035|gb|AEC00392.1| Prolyl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
          Length = 568

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 48/255 (18%), Positives = 92/255 (36%), Gaps = 16/255 (6%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++           ++E   HR + R   +    +   GV  +    W+  + +   +R 
Sbjct: 3   TSKLYAPTLREVPSDAEITSHRLMLRAGMIR---KAAGGVYTYLPLAWRTIKKIEQIIRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +E+  P +    +WQ+SG W  +   MF +K         R F L P +    
Sbjct: 60  EMDAAGGQELCMPIMQPAEIWQESGRWSVFGQEMFRLKDC-----HGREFCLGPTHEEMI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    ++SY++LP+ L +  + YR+E      GLMR R F   D + F   E   +  
Sbjct: 115 TTLVRDEVRSYKQLPLLLYQIQNKYRDEIRPRF-GLMRSREFIMKDLYSFDKDEAGADIS 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA-----ENIMKGVLDTIKNS 458
             K+++   +++   G +   V+          +      A     E       D   N 
Sbjct: 174 YKKMYDAYTNVFTRCGLKFRPVEADAGAIGGNHTHEFTVLAAAGESEIACCTACDYAANV 233

Query: 459 SQDRINTGVLLGEGA 473
            +  +       E A
Sbjct: 234 EKAELLPIDASEEEA 248



 Score = 82.9 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 28/198 (14%), Positives = 65/198 (32%), Gaps = 20/198 (10%)

Query: 465 TGVLLGEGAFYGPKFEYILKDAIGRDWQCGT-------------IQVDFNLPSRFNAFYV 511
           TGV            +  L  A      CG               ++         A ++
Sbjct: 367 TGVNPVRDFTDVLTADIRLMAAGDPCPHCGAPVEITRGIEAGQVFKLGTKYSEALGATFL 426

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL---SPIQAIVTTITSSAVEY- 567
           + +  K   + +     G        + ++   +  +W    +P + +V  + + A E  
Sbjct: 427 DENG-KEKALFMGCYGIGVGRTMAAAIEQHNDEHGIIWPRAIAPYEVVVVPVNAKASEQL 485

Query: 568 --AQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
             A+E+  +L +  +    D R +    K ++  +   P+ I  G K   E  I ++   
Sbjct: 486 ALAEEVYEMLLAAGVDAILDDRKDRAGVKFKDADLIGYPLRITIGPKALEEGKIELKVRR 545

Query: 626 STTTQKVSLLDAIPILTK 643
           S  +   +  + +  + +
Sbjct: 546 SGESCDCTKAECLAKVQE 563


>gi|307178487|gb|EFN67176.1| Bifunctional aminoacyl-tRNA synthetase [Camponotus floridanus]
          Length = 1504

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 77/401 (19%), Positives = 136/401 (33%), Gaps = 58/401 (14%)

Query: 260  EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRAN 317
             D SG        + I++ +  Y+ ++I     +E   P  + + + + +  H   +   
Sbjct: 1027 YDVSGCYILRPWSFAIWKIIKEYIDKEITALGVQECYFPIFVTRGVLEKEKTHITDFAPE 1086

Query: 318  MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
            +  V    ++       A++P +       +   L+S  ELP+RL ++ +V R E     
Sbjct: 1087 VAWVTKCGESDL-AEPVAIRPTSETVMYPAYAKWLRSDTELPLRLNQWNNVVRWEFKDP- 1144

Query: 378  HGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
               +R R F   + H  F TK +   E L I ++   +Y+D     ++    T  EK  G
Sbjct: 1145 KPFLRTREFLWQEGHSAFATKAEADEEVLIILDIYAKVYEDLLAVPVIKGRKTEKEKFPG 1204

Query: 437  SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
             D                                    Y    E  +  + GR  Q  T 
Sbjct: 1205 GD------------------------------------YTTTVEAFISTS-GRAIQGATS 1227

Query: 497  QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI--- 553
                   S+     V   +E      +++  +G   R IG+MI     +  L L P    
Sbjct: 1228 HHLGQNFSKMFNIQVEGIAEGDEKTFVYQNSWGLTTRTIGVMIMVHGDDKGLVLPPCIAS 1287

Query: 554  -QAIVTTITSS-----------AVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSI 600
             Q IV     +             E  + +  L K     ++ DFRN  T  +K     +
Sbjct: 1288 IQGIVIPCGITANMSTIEKELLQSECVKLVDELSKVSKFRVKGDFRNNRTPGWKFNHWEL 1347

Query: 601  KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            K +P+ I  G K+  +  +   R  +     V+       L
Sbjct: 1348 KGVPVRIELGPKDMKKNQVTFVRRDNLQRTTVNRDTVAASL 1388


>gi|120602767|ref|YP_967167.1| prolyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
 gi|152112308|sp|A1VE74|SYP_DESVV RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|120562996|gb|ABM28740.1| prolyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
          Length = 574

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 45/208 (21%), Positives = 85/208 (40%), Gaps = 11/208 (5%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
            ++E   H+ L R   +  +    SG+  +   G +    + + +R ++     +E+  P
Sbjct: 16  SDAEVVSHKLLVRAGMIRKL---TSGIYTFMPMGLRALNKVAAIVREEMNRAGAQEVLMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            V    LWQ++G W+ Y   +   +  +D     R + L P +      +    ++SYR+
Sbjct: 73  MVQPADLWQETGRWEFYGKELLRFRDRND-----RDYCLGPTHEEVITDLVRGEVRSYRQ 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYK 416
           LP+ L +  + +R+E      GLMR R F   DA+ F   +   +E  K ++     I+ 
Sbjct: 128 LPINLYQIQTKFRDEIRPRF-GLMRGREFVMKDAYSFDRDQAGCDESYKAMYTAYQRIFS 186

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDA 444
             G     V+  +       S      A
Sbjct: 187 RLGLRFRAVEADSGSIGGSFSHEFMVLA 214



 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 21/154 (13%), Positives = 53/154 (34%), Gaps = 11/154 (7%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE----NFKGNLPLWLSP 552
           +        NA +++ + ++    ++    +G  + R +   IE          P  ++P
Sbjct: 413 LGLKYSKSMNATFLDENGKEQ---VMVMGCYGIGVSRVVASCIEQNNDGDGIVFPPPIAP 469

Query: 553 IQAIVT---TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIIC 609
            +  +         A   A EI + L++    +  D R+E    K ++  +   P  ++ 
Sbjct: 470 YEVALLLLDPKNEEAAAKAAEIESFLEAEGHDVLLDDRDERPGVKFKDADLIGSPYQLVL 529

Query: 610 GDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           G K  +   +  +   S    ++ +         
Sbjct: 530 GGKGLARGVVEAKNRRSGEKTELPVEGFAEAFRD 563


>gi|161510954|ref|YP_089255.2| prolyl-tRNA synthetase [Mannheimia succiniciproducens MBEL55E]
 gi|114152209|sp|Q65QU0|SYP_MANSM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
          Length = 571

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 49/252 (19%), Positives = 100/252 (39%), Gaps = 13/252 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++   +       +++   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSKYLFSTLKETPNDAQVVSHQLMLRAGMIRPMA---SGLYNWLPSGIRVLEKVKNIIRE 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LWQ+SG W+ Y   +       +     R F L P +    
Sbjct: 60  EMNKSGAIEVLMPVVQPAELWQESGRWEQYGLELLRFNDRGN-----RDFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP+ L +  + +R+E      G+MR R F   DA+ F T ++     
Sbjct: 115 TDLVRREVSSYKQLPLNLYQIQTKFRDEVRPRF-GVMRSREFIMKDAYSFHTTKESLQAT 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++    +I+   G +   V+  T       S      A +    V+ + ++     I
Sbjct: 174 YDVMYQTYSNIFTRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVFSTESDYAANI 233

Query: 464 N--TGVLLGEGA 473
                + +GE A
Sbjct: 234 ELAEAIAVGERA 245



 Score = 91.0 bits (224), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 61/167 (36%), Gaps = 14/167 (8%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           I R  + G I Q+        NA       +   P+++    +G  + R +   IE +  
Sbjct: 403 IKRGIEVGHIFQLGQKYSEAMNATVQGEDGK---PLVMTMGCYGIGVTRVVASAIEQHHD 459

Query: 544 GNLPLWL----SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
               +W     +P    +  +    + S   YA+E+   L +  + +  D R E      
Sbjct: 460 ERGIIWPSDAIAPFTVAIVPMNMHKSESVQAYAEELYQTLLAQGVEVIFDDRKERPGVMF 519

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +  +  +P ++I G+K      I  +   ++  Q ++    +  L 
Sbjct: 520 ADMELIGVPHMVIIGEKNLENGEIEYKNRRTSEKQMIAKDQLLDFLK 566


>gi|253999985|ref|YP_003052048.1| prolyl-tRNA synthetase [Methylovorus sp. SIP3-4]
 gi|253986664|gb|ACT51521.1| prolyl-tRNA synthetase [Methylovorus sp. SIP3-4]
          Length = 574

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 51/250 (20%), Positives = 99/250 (39%), Gaps = 11/250 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  +       +E+E   HR + R   +  +   GSG+  W   G ++ + + + +R 
Sbjct: 3   ASQFFIATQKEAPQEAELPSHRLMLRAGLIKRL---GSGLYTWMPLGLRVLRKVETVVRD 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LWQ++G WD +   M  +     T +  R+F   P +    
Sbjct: 60  EMNKAGALELLMPAVQPAELWQETGRWDVFGPQMLKI-----TDRHERSFCFGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
             +    +KSY++LP+   +  + +R+E      G+MR R F   DA+ F T  E +   
Sbjct: 115 TDLARREIKSYKQLPLNFYQIQTKFRDEIRPRF-GVMRAREFVMKDAYSFHTSLESLEAT 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++    +++   G +   V+  T      GS      A++    +     +     +
Sbjct: 174 YASMYQAYSNVFNRLGLKFRAVRADTGAIGGDGSHEFHVLADSGEDALAYCPASDYAANV 233

Query: 464 NTGVLLGEGA 473
                L   A
Sbjct: 234 ELAEALPPAA 243



 Score = 88.7 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 30/165 (18%), Positives = 59/165 (35%), Gaps = 13/165 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN- 545
           R  + G I Q+        NA Y   + E     ++    +G  + R +G  IE      
Sbjct: 410 RGIEVGHIFQLRTKYAEAMNATYQAENGELK---IMEMGCYGIGVSRIVGAAIEQGNDAR 466

Query: 546 ---LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
               P  ++P    +  I    + +  + A  +   L+   + +  D R E       + 
Sbjct: 467 GIIFPAAMAPFSVAIAPIGMDRSDAVKDAALALYAELQQAGIDVLLDDRGERPGVMFADL 526

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +  IP  ++ GD+   E  +  +       Q V+L + +  L +
Sbjct: 527 ELIGIPHRVVIGDRGLKEGQVEYQARTDEQAQSVALSEIVSKLKQ 571


>gi|46579756|ref|YP_010564.1| prolyl-tRNA synthetase [Desulfovibrio vulgaris str. Hildenborough]
 gi|81830448|sp|Q72CD8|SYP_DESVH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|46449171|gb|AAS95823.1| prolyl-tRNA synthetase [Desulfovibrio vulgaris str. Hildenborough]
 gi|311233547|gb|ADP86401.1| prolyl-tRNA synthetase [Desulfovibrio vulgaris RCH1]
          Length = 574

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 45/208 (21%), Positives = 85/208 (40%), Gaps = 11/208 (5%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
            ++E   H+ L R   +  +    SG+  +   G +    + + +R ++     +E+  P
Sbjct: 16  SDAEVVSHKLLVRAGMIRKL---TSGIYTFMPMGLRALNKVAAIVREEMNRAGAQEVLMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            V    LWQ++G W+ Y   +   +  +D     R + L P +      +    ++SYR+
Sbjct: 73  MVQPADLWQETGRWEFYGKELLRFRDRND-----RDYCLGPTHEEVITDLVRGEVRSYRQ 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYK 416
           LP+ L +  + +R+E      GLMR R F   DA+ F   +   +E  K ++     I+ 
Sbjct: 128 LPINLYQIQTKFRDEIRPRF-GLMRGREFVMKDAYSFDRDQSGCDESYKAMYAAYQRIFS 186

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDA 444
             G     V+  +       S      A
Sbjct: 187 RLGLRFRAVEADSGSIGGSFSHEFMVLA 214



 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 21/154 (13%), Positives = 53/154 (34%), Gaps = 11/154 (7%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE----NFKGNLPLWLSP 552
           +        NA +++ + ++    ++    +G  + R +   IE          P  ++P
Sbjct: 413 LGLKYSKSMNATFLDENGKEQ---VMVMGCYGIGVSRVVASCIEQNNDGDGIVFPPPIAP 469

Query: 553 IQAIVT---TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIIC 609
            +  +         A   A EI + L++    +  D R+E    K ++  +   P  ++ 
Sbjct: 470 YEVALLLLDPKNEEAAAKAAEIESFLEAEGHDVLLDDRDERPGVKFKDADLIGSPYQLVL 529

Query: 610 GDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           G K  +   +  +   S    ++ +         
Sbjct: 530 GGKGLARGVVEAKNRRSGEKTELPVEGFAEAFRD 563


>gi|51102316|gb|AAT95871.1| prolyl-tRNA synthetase [Entamoeba invadens]
          Length = 458

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 67/398 (16%), Positives = 137/398 (34%), Gaps = 55/398 (13%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEI--NTPQVLDQHLWQQSGHWDSYRAN 317
            D SG        + +++ +  ++ ++IK    E       V    L ++    + +   
Sbjct: 13  YDISGCYILRPAAYGLWENIQQFIDKRIKRMGVENTYFPCFVSQAALKKEEDELNGFTPE 72

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           +  V  +  +       AL+P +       F + +  +R+LP+++ ++ +V R E S   
Sbjct: 73  VAWVTKSGSSDLQ-EPIALRPTSETVMYPAFKNWITGHRDLPLKVNQWCNVVRWEFS-HP 130

Query: 378 HGLMRVRGFTQDDAHVFCTKEQ-MFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
           +  +R R F   + H     +     EC +I  L  S+Y+D     ++    ++ E    
Sbjct: 131 YPFIRTREFLWQEGHTAYDNQPDCEKECRQILELYASVYEDLLAVPVIRGKKSKGETF-- 188

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
                                              GA+Y    E I+    GR  Q  T 
Sbjct: 189 ----------------------------------PGAYYSLTVECIIPT-NGRSVQAATS 213

Query: 497 QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI--- 553
                  S+         S+K   V   +  +G   R IG+ +     N  + L P    
Sbjct: 214 HHLGQTFSKLFNIQYEDDSKKKQFVF--QNSWGLSTRSIGVTVMTHGDNKGIILPPRAAG 271

Query: 554 -QAIVTT------ITSSAVEYAQEIANLLKSHHLSIETDFRN-ETINYKIREHSIKKIPI 605
            Q ++                A E+  LL  + +    D  +     +K  E+ ++ IP+
Sbjct: 272 KQVVIVPLHHKGSNNDEIDAKANELCELLLDNDIRAFADCNDMHNPGWKFTEYELRGIPL 331

Query: 606 IIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            I  G ++ + + + I R  +   ++    + +  + K
Sbjct: 332 RIELGPRDFAGKKVVIVRRDNGAKEECLWENLVATIKK 369


>gi|134095943|ref|YP_001101018.1| prolyl-tRNA synthetase [Herminiimonas arsenicoxydans]
 gi|166980129|sp|A4G8R0|SYP_HERAR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|133739846|emb|CAL62897.1| Prolyl-tRNA synthetase (Proline--tRNA ligase) (ProRS) (Global RNA
           synthesis factor) [Herminiimonas arsenicoxydans]
          Length = 577

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 60/311 (19%), Positives = 117/311 (37%), Gaps = 11/311 (3%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTP 297
            ++E   H+ + R   +  +   GSG+  +   G ++ + + + +R ++      E+  P
Sbjct: 16  SDAEIVSHKLMMRAGMIKRL---GSGIYTYMPIGLRVIRKVEAIVREEMNRAHAIELLMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            V    LWQ++G WD     +  VK      +  R +A++P +      V    +KSYR+
Sbjct: 73  LVQPAELWQETGRWDKMGPELMRVKD-----RHGREYAIQPTSEEVVTDVVRSEIKSYRQ 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYK 416
           LP+      + +R+E      GLMR R FT  DA+ F    E +      + +  + I+ 
Sbjct: 128 LPLNFYHIQTKFRDERRPRF-GLMRGREFTMKDAYSFDRDAEGLKRSYQIMFDAYVKIFN 186

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
            FG +   V          GS      A+     ++    +     +     +       
Sbjct: 187 RFGLQFRAVAADNGAIGGSGSHEFHVIADTGEDAIVYCPTSDYAANMEAAEAIAPAVPRA 246

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
              + + K A     +C  +    NLP       +    EK    ++ + ++  + R   
Sbjct: 247 AATQTLTKTATPGKAKCEDVAALLNLPLAQTVKSIVLTVEKEDKGVVSKEIWLLLLRGDH 306

Query: 537 IMIENFKGNLP 547
            + E     +P
Sbjct: 307 ELNEVKAAKIP 317



 Score = 85.6 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 64/167 (38%), Gaps = 13/167 (7%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE--- 540
           AI R  + G + Q+      +  A Y++ + +   P +I    +G  + R +G  IE   
Sbjct: 409 AIQRGIEVGHVFQLGTAYSEKMKATYLDENGK---PQLIQMGCYGIGVTRIVGAAIEQNF 465

Query: 541 -NFKGNLPLWLSPIQAIVTTITSSAVEYAQ----EIANLLKSHHLSIETDFRNETINYKI 595
            +     P  L+P + ++  +     E  +    ++   L +  + +  D R E      
Sbjct: 466 DDRGIIWPAALAPFEVVLCPMGYDRSESVKTETDKLYEALLAAGVDVILDDRGERPGAMF 525

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +  +   P  I+ G++   E ++  +         V+L D +  + 
Sbjct: 526 ADWELIGAPHRIVIGERGLKEGALEYKGRRDADATAVALDDMLAFVQ 572


>gi|302854330|ref|XP_002958674.1| hypothetical protein VOLCADRAFT_84558 [Volvox carteri f.
           nagariensis]
 gi|300255999|gb|EFJ40277.1| hypothetical protein VOLCADRAFT_84558 [Volvox carteri f.
           nagariensis]
          Length = 446

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 78/397 (19%), Positives = 149/397 (37%), Gaps = 66/397 (16%)

Query: 270 RKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHL-WQQSGHWDSYRANMFAVKCADDT 327
             G+ I++T+ SY+  + K+   +    PQ++      +++ H + +   +  V      
Sbjct: 5   PYGYAIWETIQSYLDGRFKELGVQNAYFPQLIPYSFITKEAEHVEGFAPELALVTKGGGK 64

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
             +     ++P +      +F   ++SYR+LP++L ++ +V+R E        +R   F 
Sbjct: 65  DLE-EPLVVRPTSETIINHMFAQWVQSYRDLPLQLNQWCNVHRWEMR--TRPFVRTLEFL 121

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENI 447
             +     T      E  +    +I +Y DF      + +    + R+ S A        
Sbjct: 122 WQEG---HTAHATAEEAEEEARRMIDVYTDFAINMAAMPVVPGRKSRIESFA-------- 170

Query: 448 MKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRF 506
                                   GA      E ++ D   R  Q GT   +  N    F
Sbjct: 171 ------------------------GANCTYTIEAMMGDR--RALQAGTSHNLGTNFAKAF 204

Query: 507 NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITS 562
              Y+N  S++     +H+  +G   R IG +I    ++    LP  L+P+QA++  I  
Sbjct: 205 GTQYLNRESKRH---FVHQTSWGVSTRVIGGIIMTHGDDKGLRLPPRLAPVQAVIIPIVK 261

Query: 563 S------AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASE 616
                    E AQ +A   K   + I++D R +T  +K     ++ +P+ +  G K+   
Sbjct: 262 KEEDRVPVNEAAQRLAEAAKVAGIRIDSDER-QTPGWKYNYWEMRGVPVRVEVGPKDVQS 320

Query: 617 RS-IGIRRF---GSTTTQKVSLLDA-----IPILTKE 644
            + +  RR           V +  A     I  L +E
Sbjct: 321 GTCVTARRDMPGKEGKQMGVPMESAAFVAHIKGLLEE 357


>gi|33152900|ref|NP_874253.1| prolyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
 gi|81836009|sp|Q7VKI5|SYP_HAEDU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|33149125|gb|AAP96642.1| prolyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
          Length = 571

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 50/249 (20%), Positives = 93/249 (37%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q   +       +++   H+ + R   +   A    G+  W   G KI + + + +R 
Sbjct: 3   TSQYLFSTLKETPNDAQVISHQLMLRAGMIRPTAA---GLYNWLPTGVKILKKVENIIRE 59

Query: 286 KIKDD-YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      EI  P V    LWQ+S  W+ Y   +             R F L P +    
Sbjct: 60  EMNKGGAIEILMPVVQPAELWQESSRWEQYGPELLRFADRG-----KRDFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNE 403
             +    L SY++LP+ L +  + +R+E      G+MR R F   DA+ F  T E +   
Sbjct: 115 TDLVRRELSSYKQLPLNLYQIQTKFRDEVRPRF-GVMRSREFVMKDAYSFHTTPESLQQT 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++ +   I+   G +   V+  T       S      A +    ++ + ++     I
Sbjct: 174 YEVMYQVYHRIFTRLGLDFRTVQADTGSIGGSASHEFQVLASSGEDDIVFSTESDFAANI 233

Query: 464 NTGVLLGEG 472
                +  G
Sbjct: 234 ELAEAVAMG 242



 Score = 90.2 bits (222), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 25/168 (14%), Positives = 62/168 (36%), Gaps = 14/168 (8%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           I R  + G I Q+     +  NA       +   P+++    +G  + R +   IE +  
Sbjct: 403 IKRGIEVGHIFQLGQKYSAAMNATVQGEDGK---PLVMTMGCYGIGVTRVVAAAIEQHHD 459

Query: 544 GNLPLWL----SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
               +W     +P    +  +    ++S   +A+++   L +  + +  D R E      
Sbjct: 460 ERGIIWPTDEIAPFTVAIVPMNMFKSASVQAFAEQLYTDLMAQGVDVILDDRKERPGVMF 519

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +  +  +P +I+ G+K      +  +   +     ++    +  L +
Sbjct: 520 ADMELIGVPHMIVIGEKNLENGEVEYKNRRTGEKTMIAKDQLLAYLAQ 567


>gi|172039373|ref|YP_001805874.1| prolyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
 gi|171700827|gb|ACB53808.1| prolyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
          Length = 623

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 56/243 (23%), Positives = 89/243 (36%), Gaps = 8/243 (3%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q           E+E   H+ L R   +  I   GSG+  +    W++ Q +   +R +
Sbjct: 24  SQMLFVTLREDPAEAEIPSHKLLLRAGYIRRI---GSGIYAYLPLMWRVLQKVSQIVREE 80

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E   PQ+    LW++SG W++Y      +    D  +  R   L P +     
Sbjct: 81  MNAAGAQECLLPQLQPSELWKESGRWETYTKAEGIMFSLID--RQDRELGLGPTHEEVIT 138

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            V    ++SYR+LPV L +  + +R+E      GLMR R F   DA+ F   E       
Sbjct: 139 TVAKDMIRSYRQLPVNLYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSFNEDEASLQRSY 197

Query: 406 KIH-NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
                   +I    G     V+  +       S      AE     VL T        + 
Sbjct: 198 DAMDQAYRNIISRCGLAYRAVEADSGAIGGSASQEFMILAEAGEDEVLYTEDGKYAANVE 257

Query: 465 TGV 467
             V
Sbjct: 258 KAV 260



 Score = 92.9 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 64/163 (39%), Gaps = 9/163 (5%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           A  R  + G I Q+         A + + + E+  P+++     G        + +++  
Sbjct: 452 ASARGIEVGHIFQLGTKYSEAMGATFTDENGEEK-PIVMGCYGVGVSRLAQAAVEQSYDK 510

Query: 545 NLPLWL---SPIQAIVTT---ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           +  +W    +P Q I+        + +E AQ + + L    +    D R+E    K ++ 
Sbjct: 511 DGIIWPVAIAPYQVIIIVPNINDQNQIEVAQNLYDKLNKMGVETLLDDRDERAGVKFKDA 570

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            +  IP  ++ G +      + +    S  +Q++ + + +  L
Sbjct: 571 DLIGIPYRVVTG-RSLKSGKVEVVTRKSKESQEIEVKNLVETL 612


>gi|157371993|ref|YP_001479982.1| prolyl-tRNA synthetase [Serratia proteamaculans 568]
 gi|166980154|sp|A8GIB4|SYP_SERP5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|157323757|gb|ABV42854.1| prolyl-tRNA synthetase [Serratia proteamaculans 568]
          Length = 572

 Score =  148 bits (374), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 48/249 (19%), Positives = 98/249 (39%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGLRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ + +  E+  P V    LWQ+SG W+ Y   +       D     R F L P +    
Sbjct: 60  EMNNANAIEVCMPVVQPADLWQESGRWEQYGPELLRFVDRGD-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + + SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++     
Sbjct: 115 TDLIRNEISSYKQLPLNFFQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHTSQESLQAT 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            + ++     I+   G +   V   T       S      A++    ++ +  +     I
Sbjct: 174 YEAMYEAYSKIFSRMGLDFRPVHADTGSIGGSASHEFQVLADSGEDDIVFSTGSDFAANI 233

Query: 464 NTGVLLGEG 472
                +   
Sbjct: 234 ELAEAVAPA 242



 Score = 83.3 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 30/165 (18%), Positives = 54/165 (32%), Gaps = 13/165 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           I R  + G I Q+         A             ++    +G  + R +   IE    
Sbjct: 405 IKRGIEVGHIFQLGTKYSEAMKATVQGEDG---RNQVLTMGCYGIGVTRVVAAAIEQNHD 461

Query: 545 N----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                 P  ++P Q  +  +           A+E+ N L+SH + +  D R E       
Sbjct: 462 ERGIIWPDAIAPFQVAILPMNMHKSFRVQALAEELYNTLRSHGIDVILDDRKERPGVMFA 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           +  +  +P  I+ GD+      I  +       Q +   + I  L
Sbjct: 522 DMELIGVPHSIVIGDRNLDSEEIEYKNRRVGEKQMIKTGEVIDFL 566


>gi|302342678|ref|YP_003807207.1| prolyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
 gi|301639291|gb|ADK84613.1| prolyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
          Length = 571

 Score =  148 bits (374), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 43/222 (19%), Positives = 88/222 (39%), Gaps = 11/222 (4%)

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR 284
             ++  +        ++E   H+ + R   +  +A    G+  W   G ++ + + + +R
Sbjct: 2   NFSRYLIPTLKENPSDAEVVSHQLMLRAGLIRKLA---GGIYTWLPMGLRVLRKVEAIVR 58

Query: 285 RKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPG 343
           +++     +E+  P V    LW++SG WD Y   +       D       + L P +   
Sbjct: 59  QEMNAAGAQELLMPGVQPAELWRESGRWDFYGRELLRFVDRHDN-----EYCLAPTHEEV 113

Query: 344 HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE 403
              +    ++SYR++P+ L +  + +R+E      G+MR R F   DA+ F   E    +
Sbjct: 114 ITDLARREIQSYRDMPLNLYQIQTKFRDEIRPRF-GVMRAREFLMKDAYSFDASEDAAAQ 172

Query: 404 CLKIH-NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
             +I     + I+   G    +V+  +       S      A
Sbjct: 173 SYQIMRQAYMRIFDRLGLRYGVVEADSGSIGGSFSHEFMVLA 214



 Score = 82.9 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 27/162 (16%), Positives = 64/162 (39%), Gaps = 9/162 (5%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G I ++         A Y++   +    +++     G   R +   IE       
Sbjct: 402 RGIEVGHIFRLGTKYSKALGATYLDVDGQAKT-IVMGCYGIGVS-RIVAAAIEQGNDEAG 459

Query: 546 --LPLWLSPIQAIVTTITSS--AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
              PL ++P+   V  + +   A+E AQ + + L +  +    D R+     K ++  + 
Sbjct: 460 IVFPLAIAPVSVAVLPMRAEGPAMEAAQRLHDELWALGVDCLLDDRDIRPGVKFKDSDLL 519

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +P+ ++ G K      + +++  +   + + +  A  I+ K
Sbjct: 520 GVPLRVVVGPKGLETGEVELKKRTAPQPEMIPMAQAATIIAK 561


>gi|268590504|ref|ZP_06124725.1| hypothetical protein PROVRETT_06701 [Providencia rettgeri DSM 1131]
 gi|291314090|gb|EFE54543.1| proline--tRNA ligase [Providencia rettgeri DSM 1131]
          Length = 572

 Score =  148 bits (374), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 63/330 (19%), Positives = 121/330 (36%), Gaps = 17/330 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSKYLLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYDWLPTGVRVLRKVETIVRE 59

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E++ P V    LWQ+SG W+ Y   +       +     R F L P +    
Sbjct: 60  EMENAGAIEVSLPVVQPADLWQESGRWEQYGPELLRFVDRGE-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + + SY++LP+ L +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLVRNEITSYKQLPLNLFQIQTKFRDEVRPRF-GVMRSREFIMKDAYSFHTSQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   GF+   V+  T       S      A+N    V+ + ++     I
Sbjct: 174 YDAMYEAYSKIFTRIGFDFRAVQADTGSIGGSASHEFQVLAKNGEDDVIFSTESDYAANI 233

Query: 464 NTGVLLGEGAFY-GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
                L        P  E  L D          ++       +     +    +     +
Sbjct: 234 EFAEALAPTTPRCAPTEEMRLVDTPNAKTIAELVEQFNLPVEKTVKTLIVHAKKDSGHTL 293

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
           +   + G  E     + E      PL  SP
Sbjct: 294 VALLIRGDHE-----LNEIKAEKHPLVASP 318



 Score = 91.8 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 32/166 (19%), Positives = 59/166 (35%), Gaps = 13/166 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           I R  + G I Q+         A   N      H  ++    +G  + R +   IE    
Sbjct: 405 IKRGIEVGHIFQLGTKYSEAMKASVQNEDG---HNQIVTMGCYGIGVTRIVAAAIEQSHD 461

Query: 545 N----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +     P  ++P Q  +  +         E A+++   LK++ + +  D R E       
Sbjct: 462 DRGIIWPDAIAPFQVAILPMNMHKSYRVKEVAEKLYADLKANGIDVIFDDRKERPGVMFA 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +  +  +P  I+ GD+      I  +   S   + V L + I  L 
Sbjct: 522 DMELIGVPYTIVIGDRNLDNNQIEYKSRRSDDKELVGLENVISFLK 567


>gi|149909734|ref|ZP_01898386.1| prolyl-tRNA synthetase [Moritella sp. PE36]
 gi|149807248|gb|EDM67203.1| prolyl-tRNA synthetase [Moritella sp. PE36]
          Length = 573

 Score =  148 bits (374), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 63/332 (18%), Positives = 122/332 (36%), Gaps = 21/332 (6%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +   L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R +
Sbjct: 4   SNYLLSTLKETPNDAEVISHQLMLRAGMVRRLA---SGLYTWLPTGLRVLRKVENIVREE 60

Query: 287 IK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E   P V    LWQ++G  D +   +  +       +  R+F L P +     
Sbjct: 61  MDKAGAVETLMPMVQPADLWQETGRIDKFGPELLRIND-----RHNRSFVLGPTHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNEC 404
            +    + SY++LP+ L +  + +R+E      G+MR R F   DA+ F  + E + +  
Sbjct: 116 DIARKEINSYKQLPLTLYQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHISDECLNDTY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            K+H    +I++  G E   V   T       S      AE+    ++ +  +     I 
Sbjct: 175 NKMHTAYCNIFERIGLEYRPVLADTGSIGGAVSHEFHVLAESGEDDIVFSDGSDYAANIE 234

Query: 465 TGVLLGEG----AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHP 520
               L       A           DA   +  C    +D +         V + +E+  P
Sbjct: 235 KAEALAPAGERPAATQTLTVVDTPDAHSIEDVCK--CLDVDATQTVKTLLVAAEAEEGQP 292

Query: 521 VMIHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
               + V   + R   ++ E     +    SP
Sbjct: 293 ----QGVIALVVRGDHVLNEVKAEKIAGVASP 320



 Score = 80.2 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 66/167 (39%), Gaps = 13/167 (7%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NF 542
           +I R  + G I Q+         A  +N   ++    ++    +G  + R +   IE N 
Sbjct: 406 SIKRGIEVGHIFQLGTQYAEAMKAGVLNMQGKQQ---IMTMGCYGIGVSRIVAAAIEQNH 462

Query: 543 KGNLPLW---LSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
             N  +W   ++P +  +  +    ++   E A++I   L++  + +  D R E      
Sbjct: 463 DENGIIWNESIAPYKVSIIPMNMHKSADVKEAAEKIYADLQAAGIEVFFDDRKERPGVMF 522

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +  +  IP  II GD+      +  +   +    +V++ D +  + 
Sbjct: 523 ADSELIGIPHNIIIGDRSLKNGLVEHKLRLTGDKTEVAVADIVAHVK 569


>gi|303248073|ref|ZP_07334338.1| prolyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
 gi|302490472|gb|EFL50380.1| prolyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
          Length = 575

 Score =  148 bits (373), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 48/221 (21%), Positives = 85/221 (38%), Gaps = 11/221 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++           E+E   H+ L R   +  +    +G+  +   G K    +   +R +
Sbjct: 4   SRYYAPTLKETPAEAEVVSHKLLLRAGMIRKL---TAGIYTYLPLGLKALNNVARIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      EI  P V    LW++SG W+ Y   +          +  R F L P +     
Sbjct: 61  MDRAGALEILMPAVQPADLWKESGRWEFYGRELLRFVD-----RHEREFCLGPTHEEVVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +  H ++SYR+LP+ L +  + +R+E      GLMR R F   DA+ F   +   +   
Sbjct: 116 DLVRHEIRSYRQLPINLYQIQTKFRDEIRPRF-GLMRGREFVMKDAYSFDKDDAGADASY 174

Query: 406 -KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
             ++   I I++  G +   V   +       S      AE
Sbjct: 175 WAMYKAYIRIFERLGLKFRAVSADSGAIGGSFSHEFMVLAE 215



 Score = 73.7 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 21/152 (13%), Positives = 52/152 (34%), Gaps = 9/152 (5%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPI 553
           +        NA +++   ++   +M    +   + R +   IE          P  ++P 
Sbjct: 413 LGLKYSKSLNATFLDEAGKEQFMIMGCYGI--GVSRIVAACIEQNNDASGIVFPPAIAPF 470

Query: 554 QAIVTTITSSAVE---YAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           +  +  + +   E    A E+ + L +  +    D R E    K ++  +   PI +  G
Sbjct: 471 EVALLNLNAKDAEASAKADELYDALTAAGIETLLDDREERPGSKFKDADLMGFPIQLTLG 530

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            K  +   +  +   +    ++ L   +    
Sbjct: 531 GKGLARGIVETKDRRTGEKGELPLDGFMDAFV 562


>gi|33598297|ref|NP_885940.1| prolyl-tRNA synthetase [Bordetella parapertussis 12822]
 gi|81836505|sp|Q7W481|SYP_BORPA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|33566855|emb|CAE39070.1| prolyl-tRNA synthetase [Bordetella parapertussis]
          Length = 576

 Score =  148 bits (373), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 46/212 (21%), Positives = 85/212 (40%), Gaps = 12/212 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  L        E+E   H+ + R   +  +A    G+  +   G K+ + +   +R 
Sbjct: 3   ASKYHLNTLKEAPAEAEIASHQLMTRAGMIRKLA---GGIYTYMPLGLKVIRKIEGIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LW +SG W+ Y A +  +K      +  R F L+P +    
Sbjct: 60  EMNAAGAIELLMPVVQPAELWMESGRWEQYGAELLRIKD-----RHQRDFVLQPTSEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + ++SYR+LP+      + +R+E      GLMR R FT  DA+ F   E      
Sbjct: 115 TDIARNEIQSYRQLPLNFYHIQTKFRDERRPRF-GLMRGREFTMKDAYSFDRDEAGAQRS 173

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
             I  +  +  + F    +  +        +G
Sbjct: 174 YDI--MYAAYQRIFQRLSLEFRAVAADTGSIG 203



 Score = 81.8 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 22/162 (13%), Positives = 62/162 (38%), Gaps = 13/162 (8%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN- 545
           R  + G +  +         A +++ + +   P ++    +G  + R +G  IE      
Sbjct: 410 RGIEVGHVFFLGTKYSEALKATFLDDNGK---PAVLQMGCYGIGVTRIVGAAIEQNHDAR 466

Query: 546 ---LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
               P  ++P + ++  +    + +  + A  +   L++  + +  D R+        E 
Sbjct: 467 GIIWPRAIAPYEVVICPVGWGKSETVRDTALALYEALRARGVDVMLDDRDSRPGVMFAEW 526

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
            +  +P+ +  G++  +E  + ++        KV +  A+  
Sbjct: 527 ELIGVPLRVTVGERGLNEGVVELQARREAEAAKVPVDQALAQ 568


>gi|71991342|ref|NP_001022777.1| Prolyl tRNA Synthetase family member (prs-1) [Caenorhabditis
           elegans]
 gi|459009|gb|AAA50660.1| Prolyl trna synthetase protein 1, isoform a [Caenorhabditis
           elegans]
          Length = 581

 Score =  148 bits (373), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 69/435 (15%), Positives = 144/435 (33%), Gaps = 57/435 (13%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
            +Q L       +++    + ++  + ++     D SG        + +++++  +    
Sbjct: 84  KKQTLLGVGTKKDDNYSEWYSEVITKAEMIEY-YDVSGCYVLRPWSFAVWESIQEWFDSG 142

Query: 287 IKD-DYEEINTPQ-VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           IK    +    P  V +  L ++  H   +   +  V  A ++       A++P +    
Sbjct: 143 IKKLGVKNCYFPMFVSNAALEREKTHIADFAPEVAWVTRAGNSEM-AEPIAIRPTSETVM 201

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNE 403
              +   ++S+R+LP++L ++ +V R E        +R R F   + H  F        E
Sbjct: 202 YPSYKKWVQSHRDLPIKLNQWCNVVRWEFKHPT-PFLRTREFLWQEGHTAFANPADAEKE 260

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             +I +L   +Y D     ++    +  EK  G D                         
Sbjct: 261 VFQILDLYAGVYTDLLAIPVVKGRKSEKEKFAGGD------------------------- 295

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
                      +    E  +    GR  Q  T        S+         +++      
Sbjct: 296 -----------FTTTVEAYV-ACNGRGIQGATSHHLGQNFSKMFDISYEDPAKEGERAFA 343

Query: 524 HRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTTIT------SSAVEYAQEIAN 573
            +  +G   R IG M+     +  L L P    +Q IV  +        S  +   ++  
Sbjct: 344 WQNSWGLSTRTIGAMVMIHGDDKGLVLPPRVAAVQVIVVPVGFKTENKQSLFDAVDKVTK 403

Query: 574 LLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
            L +  +  E D R N    +K     +K +PI    G  + ++  +      +   +++
Sbjct: 404 DLVADGVKAEHDLRENYNAGWKFNHWELKGVPIRFEVGPNDLAKNQVTAVIRHNGEKKQL 463

Query: 633 SLLDA---IPILTKE 644
           SL      +  L  E
Sbjct: 464 SLEGLSKTVKSLLDE 478


>gi|83589892|ref|YP_429901.1| prolyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
 gi|114152213|sp|Q2RJN1|SYP_MOOTA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|83572806|gb|ABC19358.1| prolyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
          Length = 573

 Score =  148 bits (373), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 48/249 (19%), Positives = 96/249 (38%), Gaps = 13/249 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++           E+E   H+ L R      I +  +G+  +   G ++   +   +R 
Sbjct: 3   ASELLAPTLRETPAEAEIVSHQLLLRGG---FIRKAAAGIYTYLPLGRRVLAKIEQIIRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +E+  P +    LWQ+SG W+ Y   MF ++      +  R F L P +    
Sbjct: 60  EMDRAGGQEVVLPIIQPAELWQESGRWEVYGEEMFRLQD-----RHRRQFCLGPTHEEII 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
            A+    + SY++LP+ L +  + YR+E      GL+R R F   D + F   ++  N+ 
Sbjct: 115 TALVRSEVTSYKQLPLLLYQIQNKYRDERRPRF-GLLRGREFIMKDLYSFDLDQEGLNQS 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             K++    ++++  G +   V+  +       S      A       L           
Sbjct: 174 YRKMYQAYSNVFRRCGLDFRPVQADSGAIGGNYSHEFMALATAG--EALLVYCRECDYAA 231

Query: 464 NTGVLLGEG 472
           N  + + + 
Sbjct: 232 NVEIAVAKA 240



 Score = 92.5 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 26/165 (15%), Positives = 61/165 (36%), Gaps = 10/165 (6%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           A  R  + G + Q+         A Y ++  +  HP+++     G   R +  ++E    
Sbjct: 400 AQARGIEVGQVFQLGTKYSGALGANYTDARGQ-EHPIVMGCYGIGVS-RTMAAIVEQCHD 457

Query: 545 N----LPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +     PL ++P Q ++   +       + A+ +   L +  + +  D R+E    K  E
Sbjct: 458 DQGIIWPLSVAPYQVVIIPASLKDDGQRQVAEGLYRELAAAGVEVVYDDRDERAGLKFVE 517

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             +   P+ I  G +  +  ++ ++         + L      + 
Sbjct: 518 ADLIGYPLRITVGKRTITSGTVDVKWRSRKEETPLPLEGLSAQIQ 562


>gi|119504253|ref|ZP_01626333.1| prolyl-tRNA synthetase [marine gamma proteobacterium HTCC2080]
 gi|119459761|gb|EAW40856.1| prolyl-tRNA synthetase [marine gamma proteobacterium HTCC2080]
          Length = 569

 Score =  148 bits (373), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 50/247 (20%), Positives = 98/247 (39%), Gaps = 13/247 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A    G+  W   G ++ + +   +R 
Sbjct: 3   ASQFLLSTLKETPADAEIISHQLMLRAGLIRRVAA---GIYNWMPLGLRVIRRVEKVVRE 59

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    EI+ P V    LW +SG W+ Y   +  ++      +  R F L P +    
Sbjct: 60  EMCRAGALEISMPVVQPAELWLESGRWEQYGPELARLQD-----RHNRDFCLGPTHEEII 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
            A+    +KSY++LP+   +  + +R+E      G+MR R F   DA+ F   +    + 
Sbjct: 115 TALGRSEIKSYKQLPLNFFQIQTKFRDEIRPRF-GVMRSREFIMKDAYSFHADQVSLEQT 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             ++H    +I+   G     V+  T       S      A++    +     +SS    
Sbjct: 174 YWRMHEAYTAIFTRLGLNFRSVEADTGSIGGSHSHEFHVLADSGEDAI--AFSDSSDYAA 231

Query: 464 NTGVLLG 470
           N  +   
Sbjct: 232 NVELAPA 238



 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/165 (18%), Positives = 60/165 (36%), Gaps = 11/165 (6%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           I R  + G I Q+         A  +N    K  P+ +     G   R +   IE    +
Sbjct: 401 IRRGIEVGHIFQLGTKYSEAMKAVVLNDEG-KSVPMAMGCYGIGVT-RIVAAAIEQNHDD 458

Query: 546 ----LPLWLSPIQAIVTTITSSAVEYA----QEIANLLKSHHLSIETDFRNETINYKIRE 597
                P  ++P +  +  +     E      + +   L +  + +  D R E    K  +
Sbjct: 459 QGIIWPDAMAPFEVALVPLNMDKSEAVATATEALYEQLLTMGVEVFMDDRKERPGVKFAQ 518

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             +  IP+ +  GD+  +E +I ++   S   Q + + +A   + 
Sbjct: 519 MELIGIPVRVTLGDRSLAEGNIELQERTSDQKQLIPVSEASKAIV 563


>gi|332289599|ref|YP_004420451.1| prolyl-tRNA synthetase [Gallibacterium anatis UMN179]
 gi|330432495|gb|AEC17554.1| prolyl-tRNA synthetase [Gallibacterium anatis UMN179]
          Length = 568

 Score =  148 bits (373), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 50/263 (19%), Positives = 99/263 (37%), Gaps = 11/263 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A    G+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTLKETPTDAEVVSHQLMLRAGMIRKLAA---GLYTWLPTGVRVLKKVENIVRE 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LWQ+S  W+ Y   +       D     R F L P +    
Sbjct: 60  EMNKSGAIEVVMPVVQPADLWQESQRWEQYGPELLRFTDRGD-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    L SY++LP+ L +  + +R+E      G+MR R F   D + F   ++   + 
Sbjct: 115 TDLARRELSSYKQLPINLYQIQTKFRDEVRPRF-GVMRSREFIMKDGYSFHLDKESLQQT 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +H    +I+   G +   V+         GS      A++    ++ + ++     I
Sbjct: 174 YDVMHQTYCNIFNRLGLDFRPVQADNGSIGGSGSHEFQVLADSGEDDIVFSTESDYAANI 233

Query: 464 NTGVLLGEGAFYGPKFEYILKDA 486
                +  G       E  + D 
Sbjct: 234 EMAEAVALGERQAATEELRIVDT 256



 Score = 92.9 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 30/165 (18%), Positives = 60/165 (36%), Gaps = 9/165 (5%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           I R  + G I Q+         A       +    +M+     G        + ++    
Sbjct: 402 IKRGIEVGHIFQLGKKYSEAMKATVQGEDGKPQT-MMMGCYGIGITRVVAAAIEQSHDER 460

Query: 546 LPLW---LSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
             +W   L+P Q  +  +    +++  +YA+E+   L +  + +  D R E       + 
Sbjct: 461 GIIWSDALAPFQVAIVPMNMHKSAAVQQYAEELYQTLLAQGIEVLFDDRKERPGVMFADM 520

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +  IP +II G+K   +  I  +   S   Q V     +  +T+
Sbjct: 521 ELIGIPHMIIIGEKNLEKGEIEYKSRRSGEKQMVDKQQLVKFITE 565


>gi|255994086|ref|ZP_05427221.1| proline--tRNA ligase [Eubacterium saphenum ATCC 49989]
 gi|255993754|gb|EEU03843.1| proline--tRNA ligase [Eubacterium saphenum ATCC 49989]
          Length = 582

 Score =  148 bits (373), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 50/228 (21%), Positives = 96/228 (42%), Gaps = 11/228 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++           E+E + H  L R   +  +A   SGV  +   G K  + + + +R +
Sbjct: 4   SKAYFKTLREVPAEAELKSHILLLRAGMIRKLA---SGVYGYMPMGLKALKKIENIIRNE 60

Query: 287 IK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +  +  +EI    +    LW++SG W++Y   M+ V    D     R F L P +     
Sbjct: 61  MDAEGCQEILMSALQPAELWKESGRWNAYGPEMWRVCDRHD-----REFCLGPTHEEVFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +  + + S+R+LP+ L +  + YR+E      GLMR R F   D++ F   E+  +   
Sbjct: 116 DIIRNDVDSHRKLPINLYQIQTKYRDEARPRF-GLMRSREFIMKDSYSFDKDEEGLDVSY 174

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
           + ++    +++K    + + V+  T      GS      A+     + 
Sbjct: 175 ENMYKRYENVFKRMELDVMPVEADTGAMGGNGSHEFIAKADAGESEIA 222



 Score = 80.2 bits (196), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 25/156 (16%), Positives = 56/156 (35%), Gaps = 8/156 (5%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIV 557
           +         A Y +        + +     G       ++ +N   N  +W  P+    
Sbjct: 419 LGTKYSEPMKAIYKDED-MNERLMYMGSYGIGVSRTLAAVIEQNSDENGIIWPLPVAPYH 477

Query: 558 TTIT------SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
             IT            A++I   L+  ++ +  D R+E    K ++  +  IP  I  G 
Sbjct: 478 VIITLINPSDKDQTALAEDIYEKLRKSNIDVILDDRDERPGVKFKDADLIGIPFRINVG- 536

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLP 647
           ++A++  +  +  GS     +   + + I + E++ 
Sbjct: 537 RDAADGKVEFKVRGSNYGMDMKKRETVVIDSNEAVK 572


>gi|227488647|ref|ZP_03918963.1| prolyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51867]
 gi|227543250|ref|ZP_03973299.1| prolyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51866]
 gi|227091541|gb|EEI26853.1| prolyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51867]
 gi|227181059|gb|EEI62031.1| prolyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51866]
          Length = 588

 Score =  148 bits (373), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 65/414 (15%), Positives = 140/414 (33%), Gaps = 43/414 (10%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +  +A    GV  W   G ++ + + + +R ++     +E+  P 
Sbjct: 19  DAEVPSHKLLVRAGYIRRVA---PGVYTWLPLGLRVLRKIENIVREEMNAIGGQELRFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++ +  W  Y  ++F +K      +      L P +      V      SY++ 
Sbjct: 76  LLPREPYELTQRWTEYGNSLFRLKD-----RKGNDMLLGPTHEEMFTQVVKDMYSSYKDF 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH-NLIISIYKD 417
           PV L +  + YR+E      G++R R F   D++ F   ++  +E  + H     +I+  
Sbjct: 131 PVLLYQIQTKYRDEERPR-AGILRGREFVMKDSYSFNMDDEGLDESYQNHRQAYQNIFNR 189

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
            G + ++ K ++       S+     +EN     + +   +    +   V         P
Sbjct: 190 LGLDYVICKATSGAMGGSASEEFLAVSENGEDTFVQSSDKTYAANVEAVVTPAAE----P 245

Query: 478 K-FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC---HPVMIHRAVFGSIER 533
           +  E   +  +    Q  TI+      +        +          +++  A  G+   
Sbjct: 246 RPIEGQPEAELHGTPQAETIEALVEWANSKGITIEGTDITAADTLKCIVVKVAKPGADPE 305

Query: 534 FIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIA-----NLLKSHHLSIET 584
              I++    E   G L   L P    + +      E +  +             L++  
Sbjct: 306 LTAILVPGDREVDMGRLEASLEPSTVELASD-EDFKETSFLVKGYVGPRSFNKQGLTVLA 364

Query: 585 DFRNETINYKIREHSIKKIPIIIICGDKEASERSI-GIRRFGSTTTQKVSLLDA 637
           D R       + E +        I G  E     +  +     T    +   + 
Sbjct: 365 DPR-------VAEGTS------WIIGADEHEHHMVGAVAGRDFTVDGSIEAAEV 405



 Score = 81.4 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 69/173 (39%), Gaps = 15/173 (8%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE---- 540
            + R  + G I Q+     +  +   ++ + ++  P M    +   + R + +++E    
Sbjct: 419 TLQRGIEIGHIFQLGRKYTTAMDVQILDENGKRSVPTMGSYGI--GVSRAMAVIVEQSYD 476

Query: 541 NFKGNLPLWLSP--IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIRE 597
           +     P  ++P  +  +V      A + A+++   L +  + +  D R + +   K ++
Sbjct: 477 DKGLVWPACVAPYHVHVVVANKDKEAQDAAEKLVADLDAAGIEVLFDDRPKVSPGVKFKD 536

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL---TKESLP 647
             +  IP  ++ G +   +  I  R      T  + +  A+  +    +E+L 
Sbjct: 537 AELLGIPYTVVLG-RAFKDGEIEFRVRAG-ETSTIPVDGALEHIVTTVREALA 587


>gi|312087334|ref|XP_003145431.1| hypothetical protein LOAG_09856 [Loa loa]
 gi|307759406|gb|EFO18640.1| hypothetical protein LOAG_09856 [Loa loa]
          Length = 528

 Score =  148 bits (373), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 81/445 (18%), Positives = 158/445 (35%), Gaps = 61/445 (13%)

Query: 210 GDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWH 269
            +S+    S + G     +Q         +E+    + ++  + ++     D SG     
Sbjct: 30  SNSHIGATSSMKGRGDVRKQTKLGIEVTKDENYCEWYVQVITKAEMIEY-YDISGCYVLR 88

Query: 270 RKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDT 327
              + I++ +  +   +IK    +    P  + Q   + +  H   +   +  V  A  +
Sbjct: 89  PWSYAIWEFIQEWFDEEIKKLGVKNCYFPLFVSQSALEREKTHISDFAPEVAWVTRAGQS 148

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
                  A++P +       +   ++S+R+LP++L ++ +V R E        +R R F 
Sbjct: 149 DL-AEAIAIRPTSETVMYPSYAKWVQSHRDLPIKLNQWCNVVRWEFKHPT-PFLRTREFL 206

Query: 388 QDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
             + H  F TK +  +E  KI +L   IY D     ++    T  EK  G +        
Sbjct: 207 WQEGHTAFQTKTEAEDEVFKILDLYAQIYTDLLAIPVIKGRKTEKEKFAGGE-------- 258

Query: 447 IMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI-QVDFNLPSR 505
                                       +    E  +    GR  Q  T   +  N    
Sbjct: 259 ----------------------------FTTTVEAYVP-INGRGIQGATSHHLGQNFSKM 289

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTTIT 561
           FN  + + +      V + +  +G   R IG ++     N  L L P    IQ I+  + 
Sbjct: 290 FNISFEDPNGSGK--VHVWQNSWGLSTRTIGALVMIHGDNYGLVLPPKVAAIQMIIVPVG 347

Query: 562 SSA----------VEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICG 610
            +A          +E A+EI ++L +  +  E D R+  +  +K     +K IP+ I  G
Sbjct: 348 ITAQTKDEQKVALIEKAKEINDVLVNASIRAELDVRDNISSGWKFNHWELKGIPVRIEIG 407

Query: 611 DKEASERSIGIRRFGSTTTQKVSLL 635
            K+ +   +      S   + + + 
Sbjct: 408 PKDLANSQVTCVIRYSGEKRIIPMD 432


>gi|298489744|ref|YP_003719921.1| prolyl-tRNA synthetase ['Nostoc azollae' 0708]
 gi|298231662|gb|ADI62798.1| prolyl-tRNA synthetase ['Nostoc azollae' 0708]
          Length = 597

 Score =  148 bits (373), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 58/253 (22%), Positives = 101/253 (39%), Gaps = 8/253 (3%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +  I   GSGV  +    W++ Q +   +R ++     EE   PQ
Sbjct: 17  DAEIPSHQLLLRAGYIRRI---GSGVYAYLPLMWRVLQKVSQIVREEMNATGAEECLLPQ 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW+ SG WD+Y      +    D  +  +   L P +      V    ++SYR+L
Sbjct: 74  LQPAELWKDSGRWDTYTKAEGIMFSLID--RREQQLGLGPTHEEVITTVARDMIRSYRQL 131

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKD 417
           P+ L +  + +R+E      GLMR R F   D + F T E+   +  + ++    ++ + 
Sbjct: 132 PLHLYQIQTKFRDEIRPRF-GLMRSREFIMKDGYSFHTDEESLKKTYQDMYQAYSNMLRR 190

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
            G     V+  +      GS      A+     VL T        +   V L   A   P
Sbjct: 191 AGLAFRAVEADSGAIGGSGSTEFMVLADAGEDEVLYTEDGKYAANVEKAVSLPAEAETSP 250

Query: 478 KFEYILKDAIGRD 490
              +  ++  G +
Sbjct: 251 FTRFEKRETPGTE 263



 Score = 89.5 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 27/162 (16%), Positives = 66/162 (40%), Gaps = 9/162 (5%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I Q+         A Y+N   EK  P+++     G        + +++  +  
Sbjct: 435 RGIEVGHIFQLGTKYSEAMGATYINEQGEKK-PLIMGCYGVGVSRLAQSAVEQSYDKDGI 493

Query: 548 LWL---SPIQAIV-TTITSS--AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W    +P  +I+          +E A+++   L    +    D R+E    K ++  + 
Sbjct: 494 IWPVAIAPYHSIITIPNIKDAQQIEVAEKLYTELNKAGVETLLDDRDERAGVKFKDADLI 553

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            IP  I+ G +  +   + + +  +  +Q++++ + +  L +
Sbjct: 554 GIPFRIVTG-RAIANGKVEVVKRANRESQQIAIEEVVNTLQQ 594


>gi|242793409|ref|XP_002482155.1| prolyl-tRNA synthetase [Talaromyces stipitatus ATCC 10500]
 gi|218718743|gb|EED18163.1| prolyl-tRNA synthetase [Talaromyces stipitatus ATCC 10500]
          Length = 593

 Score =  148 bits (373), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 87/410 (21%), Positives = 152/410 (37%), Gaps = 67/410 (16%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRAN 317
            D SG        + +++T+ ++   KIK       + P  + + + Q +  H + + A 
Sbjct: 106 YDVSGCFILKPASYFVWETIQNWFNDKIKKMGVRNCSFPLFVSEDVLQREKDHIEGFAAE 165

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           +  V  A  T  + R  A++P +       +   ++S+R+LP++L ++ SV R E     
Sbjct: 166 VAWVTHAGSTPLE-RKIAIRPTSETVMYPYYAKWIRSHRDLPLKLNQWNSVVRWEFKHP- 223

Query: 378 HGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
              +R R F   + H    T+E    E L+I +    +Y+D     ++    T  EK  G
Sbjct: 224 QPFLRTREFLWQEGHTAHLTEESAAEEVLQILDHYAHVYEDLLAVPVVRGKKTEKEKFAG 283

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
                                                +Y    E  +  A GR  Q GT 
Sbjct: 284 G------------------------------------YYTTTVEGYIP-ATGRGIQGGTS 306

Query: 497 QVDFNLPSRFNAFYVNSHSEKCHP----VMIHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
                  S+     V   + K       + + +  +G   R IG+M+     N  L L P
Sbjct: 307 HCLGQNFSKMFGITVEDPNAKGEDKGASLYVWQNSWGLSTRTIGVMVMIHSDNRGLVLPP 366

Query: 553 ----IQAIVTTI----TSSAVEYAQ------EIANLLKSHHLSIETDFRNE-TINYKIRE 597
               IQ I+  +     ++  E AQ      E+A+ L +  +  ETD R+  +  YK  +
Sbjct: 367 RVAEIQTIIVPVGITKNTTDEERAQIYKDCSELASKLAAVGVRTETDLRDGYSPGYKFND 426

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFG--STTTQKV----SLLDAIPIL 641
             ++ +P+ +  G  EA    I   R        +      SL  A+P L
Sbjct: 427 WELRGVPLRLEFGPGEAKGGFITASRRDIPGKDGKTTIPLNSLTTAVPEL 476


>gi|146310396|ref|YP_001175470.1| prolyl-tRNA synthetase [Enterobacter sp. 638]
 gi|166980121|sp|A4W6T9|SYP_ENT38 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|145317272|gb|ABP59419.1| prolyl-tRNA synthetase [Enterobacter sp. 638]
          Length = 572

 Score =  148 bits (373), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 49/244 (20%), Positives = 99/244 (40%), Gaps = 11/244 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGLRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E++ P V    LW +SG W+ Y   +       +     R+F L P +    
Sbjct: 60  EMNNAGAIEVSMPVVQPADLWVESGRWEQYGPELLRFVDRGE-----RSFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+   +  + +R+E      G+MR R F   D++ F T ++   E 
Sbjct: 115 TDLIRNELNSYKQLPLNFFQIQTKFRDEVRPRF-GVMRSREFLMKDSYSFHTSQESLQET 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             K++     I+   G +   V+  T       S      A++    V+ +  +     I
Sbjct: 174 YDKMYEAYSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVIFSDTSDYAANI 233

Query: 464 NTGV 467
               
Sbjct: 234 EFAE 237



 Score = 85.6 bits (210), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 59/177 (33%), Gaps = 13/177 (7%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
           P  +      I R  + G I Q+        NA             ++    +G  + R 
Sbjct: 395 PSPDGQGTLMIKRGIEVGHIFQLGTKYSEALNASVQGEDG---RNQILTMGCYGIGVTRV 451

Query: 535 IGIMIENFKGN----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDF 586
           +   IE          P  L+P Q  +  +         E A+++ + L++  + +  D 
Sbjct: 452 VAAAIEQNHDERGIVWPDNLAPFQVAILPMNMHKSYRVQELAEKLYSELRAQGIEVLMDD 511

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           R E       +  +  IP  ++ GD+      I  +   S   Q +   D +  L K
Sbjct: 512 RKERPGVMFADMELIGIPHTVVIGDRNLDSDDIEYKYRRSGEKQMIKTGDILDYLVK 568


>gi|258573385|ref|XP_002540874.1| prolyl-tRNA synthetase [Uncinocarpus reesii 1704]
 gi|237901140|gb|EEP75541.1| prolyl-tRNA synthetase [Uncinocarpus reesii 1704]
          Length = 586

 Score =  148 bits (373), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 81/451 (17%), Positives = 158/451 (35%), Gaps = 72/451 (15%)

Query: 228 QQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI 287
           + E         + +      +     +    ED     +     + I++ + ++   KI
Sbjct: 45  KSESKTSTAKAPKKKIEGAALIG----IDVAKEDDFAAWYQQPHSFFIWEEIQAWFNDKI 100

Query: 288 KD-DYEEINTPQVLDQHL-WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           K    +  + P  + + +  ++  H + + A +  V  A +   + +  A++P +     
Sbjct: 101 KKMGVKNCSFPLFVSEDVLKKEKDHIEGFAAEVAWVTHAGNNQLEKK-IAIRPTSETVMY 159

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN-EC 404
             +   ++S+R+LP++L ++ SV R E        +R R F   + H     E     E 
Sbjct: 160 PYYAKWIRSHRDLPLKLNQWNSVVRWEFKNP-QPFLRTREFLWQEGHTAHLTEAAAREEV 218

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
           L+I      +Y+      ++    T  EK  G                            
Sbjct: 219 LQILQHYAHVYEQLLAVPVIQGQKTDKEKFAGG--------------------------- 251

Query: 465 TGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHS---EKCHP 520
                     Y    E  +  A GR  Q GT   +  N    FN    +  S   EK  P
Sbjct: 252 ---------LYTTTVEGYIP-ATGRGIQGGTSHGLGQNFSKMFNITVEDPTSKPDEKKPP 301

Query: 521 VMIHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTTIT----------SSAVE 566
           + + +  +G   R +G+M+     N  L L P    IQ ++  +           SS   
Sbjct: 302 LYVWQNSWGLSTRTLGVMVMVHSDNRGLVLPPRVADIQTVIVPVGLTAKTPDDVRSSINA 361

Query: 567 YAQEIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
             + + ++L++  +  E D R   +  +K  +  +K IP+ +  G  E++   +   R  
Sbjct: 362 EIEHLRSVLEAAGVRAEVDKREGYSPGWKFNDWELKGIPLRLEFGPGESAGGFVTTSRRD 421

Query: 626 STTTQKVS------LLDAIPILTKESLPPDC 650
               +  S      L  A+P L  E++  D 
Sbjct: 422 IPGKEGKSSIPISELATAVPALL-ETIQADL 451


>gi|56752145|ref|YP_172846.1| prolyl-tRNA synthetase [Synechococcus elongatus PCC 6301]
 gi|81820564|sp|Q5N044|SYP_SYNP6 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|56687104|dbj|BAD80326.1| proline-tRNA ligase [Synechococcus elongatus PCC 6301]
          Length = 600

 Score =  148 bits (373), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 68/305 (22%), Positives = 115/305 (37%), Gaps = 15/305 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q           E+E   H+ L R   +  IA   SG+  +    W++ + +   +R +
Sbjct: 4   SQMLFVTLREDPAEAEIPSHKLLLRAGYIRRIA---SGIYAYLPLMWRVLRKVSQIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E   PQ+    LWQ+SG W++Y      +   DD  +  R   L P +     
Sbjct: 61  MDATGAQETLLPQLQPAELWQESGRWETYAKAEGIMFSLDD--RQQRQLGLGPTHEEVIT 118

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           AV    ++SYR+LP  L +  + +R+E      GLMR R F   DA+ F   E+   +  
Sbjct: 119 AVARDLIRSYRQLPQNLYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSFHADEESLRQTY 177

Query: 406 KIH-NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
                   +I++  G +   V+  +       S      A+     +L T        + 
Sbjct: 178 AAMDQAYRNIFRRCGLQFRAVEADSGAIGGSASQEFMILADAGEDEILYTEDGRYAANVE 237

Query: 465 TGV-LLGEG---AFYG-PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
             V L  E    AF    K E    D I     C  ++ D     +   +     + K  
Sbjct: 238 KAVSLPAEAIASAFTTFEKRETPGTDTI--ASLCEFLKADPTQVVKQVLYQAVFDNGKLL 295

Query: 520 PVMIH 524
           P++I 
Sbjct: 296 PILIS 300



 Score = 82.1 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 27/165 (16%), Positives = 62/165 (37%), Gaps = 9/165 (5%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           A  R  + G I Q+         A +   +  +  P+ +     G        + +++  
Sbjct: 431 ASARGIEAGHIFQLGLKYSQAMGATFTTENGTEE-PLWMGCYGIGVSRVAQAAVEQSYDK 489

Query: 545 NLPLWL---SPIQAIVTT---ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           +  +W    +P QA+V       +  V  A++I   L +  +    D R+E    K ++ 
Sbjct: 490 DGIIWPVAIAPYQAVVVIPNITDTEQVAAAEKIYADLTAAGIETLLDDRDERAGVKFKDA 549

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +  IP  I+ G +   E  + + +  S  +  +++   +  +  
Sbjct: 550 DLIGIPYRIVTG-RSLKEGKVEVVQRASKESSVIAVGSVVETVQD 593


>gi|312148113|gb|ADQ30772.1| prolyl-tRNA synthetase [Borrelia burgdorferi JD1]
          Length = 488

 Score =  148 bits (373), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 75/431 (17%), Positives = 157/431 (36%), Gaps = 61/431 (14%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
           ++ ++   E+   + +  + ++  L   +     ++     G+ I+  + S + +K K+ 
Sbjct: 1   MSDFIASKEDDYSKWYLDIVQKAKLADYSPVKGCMVI-MPYGYSIWSKIQSILDKKFKET 59

Query: 290 DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
            +E    P ++     + +  H D +      +K A           L+P +      ++
Sbjct: 60  GHENAYFPMLIPYSFLEREKDHIDGFSPEFAIIKDAGGESL-AEPLVLRPTSETIIWNMY 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
           +  +KSYR+LP+++ ++ +V R E        +R   F   + H   T      E L+  
Sbjct: 119 SKWIKSYRDLPLKINQWANVVRWEKR--TRPFLRTTEFLWQEGH---TAHATEEEALEET 173

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
            LI+ +YK F                          E+ +   +   K S +++      
Sbjct: 174 LLILDVYKRF-------------------------IEDYLAIPVFCGKKSEKEKF----- 203

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAV 527
              GA      E +++D   +  Q  T      N    F+  + +   +  H   +  + 
Sbjct: 204 --AGAVSTYSIEALMQD--KKALQAATSHYLGLNFAKAFDVKFQDKDGKMRH---VFASS 256

Query: 528 FGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTT-------ITSSAVEYAQEIANLLK 576
           +G   R IG +I    +     LP  ++PI+ IV         I    ++Y+  + + LK
Sbjct: 257 WGVSTRLIGALIMVHSDEKGLVLPPRIAPIEIIVIPIFKKEDEINKKILDYSDCVVDALK 316

Query: 577 SHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT--TQKVS 633
                +E D     +  ++      K IPI +  G  +    S+ I R         ++S
Sbjct: 317 KAEFRVEIDKDVRSSPGFRFSSAEFKGIPIRLEVGINDVLLNSVTISRRDKDRKFKYQIS 376

Query: 634 LLDAIPILTKE 644
           L   +  +  E
Sbjct: 377 LDSLVIKVKVE 387


>gi|328725988|ref|XP_003248697.1| PREDICTED: probable threonyl-tRNA synthetase 2, cytoplasmic-like
           [Acyrthosiphon pisum]
          Length = 180

 Score =  148 bits (373), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 71/182 (39%), Positives = 103/182 (56%), Gaps = 7/182 (3%)

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +A+F  + RNE  G+L GL  V+ F  DDAH+FCT E++  E +   + +  +Y  F F 
Sbjct: 5   MADFRVIQRNELLGALTGLTHVQRFQLDDAHIFCTTEEIGQEMMSSLDFLRHVYTVFRFT 64

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
               +LS RPEK +G   +  +AE  +   L+             +   +GAFYGPK + 
Sbjct: 65  -FQFRLSARPEKYLGELEMLKNAEKQLADSLNLFCKPW------TLNPVDGAFYGPKIDI 117

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            + DA+ R  QC TIQ+DF LP RFN  +++   EK   V+IHRA+FGS+ER I I+ E+
Sbjct: 118 TISDALKRQHQCATIQLDFQLPIRFNLNFISESGEKKRSVIIHRAIFGSVERMIAILTES 177

Query: 542 FK 543
           F 
Sbjct: 178 FA 179


>gi|292489201|ref|YP_003532088.1| prolyl-tRNA synthetase [Erwinia amylovora CFBP1430]
 gi|292898564|ref|YP_003537933.1| prolyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
 gi|291198412|emb|CBJ45519.1| prolyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
 gi|291554635|emb|CBA22316.1| Prolyl-tRNA synthetase [Erwinia amylovora CFBP1430]
          Length = 572

 Score =  148 bits (373), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 54/249 (21%), Positives = 100/249 (40%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            TQ  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TTQYLLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGLRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    EI+ P V    LWQ+SG W+ Y   +  +    D     R F L P +    
Sbjct: 60  EMNNAGAIEISMPVVQPADLWQESGRWEQYGPELLRLVDRSD-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+ L +  + +R+E      G+MR R F   DA+ F T +    E 
Sbjct: 115 TDLIRNELSSYKQLPLNLFQIQTKFRDEVRPRF-GVMRSREFIMKDAYSFHTSQGSLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +H      +   G +   V+  T       S      A++    ++ + ++     I
Sbjct: 174 YDAMHRAYSQSFSRMGLDFRAVQADTGSIGGNASHEFQVLAQSGEDDIVFSSESDYAANI 233

Query: 464 NTGVLLGEG 472
                L   
Sbjct: 234 EMAEALPPA 242



 Score = 87.1 bits (214), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 58/168 (34%), Gaps = 13/168 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           I R  + G I Q+         A             ++    +G  I R +   IE N  
Sbjct: 405 IKRGIEVGHIFQLGTKYSEAMKASVQGEDG---RNQILTMGCYGIGITRIVAAAIEQNHD 461

Query: 544 GNLPLW---LSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
               +W   L+P Q  +  +         E A+ + + L++  + +  D R E       
Sbjct: 462 ERGIIWSPALAPFQVAILPMNMQKSFRVKELAEALYHQLRAKGIDVILDDRKERPGVMFA 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  +  +P  I+ G++      +  +   +   + +   + I  L +E
Sbjct: 522 DMELIGVPHTIVVGERHLDSEEVEYKSRRAGEKRMIKTNEIIDFLVEE 569


>gi|126642843|ref|YP_001085827.1| prolyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978]
          Length = 546

 Score =  148 bits (373), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 70/396 (17%), Positives = 138/396 (34%), Gaps = 44/396 (11%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
            I +  SG+  W   G ++ + + + +R ++      E+  P      LW++SG ++ Y 
Sbjct: 6   MIRKLASGLYTWLPMGTRVLKKVDAIVREEMNRSGAMEVFMPVTQPASLWEESGRYEQYG 65

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
             +   K   D       F L P +      +  + LKSY++LPV   +  + +R+E   
Sbjct: 66  PELLRFKDRHDNP-----FVLGPTHEEVITDLARNELKSYKQLPVNFYQIQTKFRDEIRP 120

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              G+MR R F   DA+ F   ++   E    +++    I+   G +   V+  T     
Sbjct: 121 RF-GVMRSREFIMKDAYSFHATQESLQETYDVMYDTYSRIFTRLGLDFRPVQADTGSIGG 179

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRIN--TGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
             S      A +    +  + ++     +     VL+GE A   P  E+ L +   +   
Sbjct: 180 SASHEFHVLAASGEDDIAFSTESDYAANVEMAEAVLVGERA--APTQEFKLVETPNQKTI 237

Query: 493 CGTIQVDFNLPSRF--NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL 550
               Q     P +            EK +  ++   + G  E     + E      PL  
Sbjct: 238 ADVCQFLNADPKQSVKALLVQGVADEKGNVPVVALFLRGDHE-----LNEIKAEKHPLVA 292

Query: 551 SP------IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
           +P       Q     +T+            L    +++  D     ++            
Sbjct: 293 APLAFATEEQLQAFGLTAGFTGP-----QGLVEKGITVIVDRAASVLSD----------- 336

Query: 605 IIIICGDKEASERSIGIR-RFGSTTTQKVSLLDAIP 639
              + G  EA + ++G+     +  T+   L + + 
Sbjct: 337 --FVAGANEADKHAVGVNWERDAQITEVFDLRNVVE 370



 Score = 89.5 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 59/167 (35%), Gaps = 13/167 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           I R  + G I Q+            +    +   P  +    +G  + R +   IE N+ 
Sbjct: 383 IKRGIEVGHIFQLGTKYSEALGCKVLGEDGK---PFTVTMGCYGIGVTRVVAAAIEQNYD 439

Query: 544 GNLPLWL---SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
               +W    +P +  +  +    +   +E A+ +   L++    +  D RNE    K  
Sbjct: 440 DKGIIWPQAIAPFEIAIVPMNAHKSPRTLEAAEALYAELQAQGFDVLLDDRNERPGVKFS 499

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  +  IP  I+ G+K     +   +         ++  + +  L +
Sbjct: 500 DLELMGIPHRIVIGEKGLDAGTFEYKGRRDAEASNLTKEELLAKLAR 546


>gi|93355883|gb|ABF09972.1| prolyl-tRNA synthetase [Cupriavidus metallidurans CH34]
          Length = 614

 Score =  148 bits (372), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 45/221 (20%), Positives = 95/221 (42%), Gaps = 11/221 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       ++E   H+ + R   +  +   G+G+  +   G ++ + + + +R 
Sbjct: 44  ASQFFISTLKEAPADAEIVSHKLMMRAGMIKKL---GAGIYNYMPVGLRVIRKVENIVRE 100

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E++ P +    LWQ++G WD     +  +K      +  R FA++P +    
Sbjct: 101 EMNRAGAVELSMPVIQPAELWQETGRWDKMGPELLRLKD-----RHERDFAVQPTSEEVV 155

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
             +    ++SY++LPV   +  + +R+E      G+MR R FT  DA+ F    + +   
Sbjct: 156 TDIARTEIRSYKQLPVNFYQIQTKFRDERRPRF-GIMRGREFTMKDAYSFDRDIDGLKAS 214

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
              +++  + I++ FG E   V          GS      A
Sbjct: 215 YQNMYDAYVRIFQRFGLEFRAVAADNGAIGGSGSHEFHVIA 255



 Score = 76.7 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 53/151 (35%), Gaps = 12/151 (7%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G +  +        NA +++ +  K  P+ +     G   R +G  IE       
Sbjct: 449 RGIEVGHVFMLGTRYSESMNATFLDENG-KTQPMQMGCYGIGVT-RILGAAIEQNYDERG 506

Query: 546 --LPLWLSPIQAIVTTITSSAVEY----AQEIANLLKSHHLSIETDFRNETINYKIREHS 599
              P  ++P   +V  +     E     A  I   L +  + +  D R E       +  
Sbjct: 507 IIWPAAIAPFAVVVCPVGYDRNEAVKAEADRIHAELLAAGVDVILDDRGERPGVMFADWE 566

Query: 600 IKKIPIIIICGDKEASERSIGIR-RFGSTTT 629
           +  +P  ++ GD+   E  +  + R  +  T
Sbjct: 567 LIGVPHRVVVGDRGLKEGKVEYQGRRDAQAT 597


>gi|308185763|ref|YP_003929894.1| Prolyl-tRNA synthetase [Pantoea vagans C9-1]
 gi|308056273|gb|ADO08445.1| Prolyl-tRNA synthetase [Pantoea vagans C9-1]
          Length = 572

 Score =  148 bits (372), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 52/249 (20%), Positives = 100/249 (40%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            TQ  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TTQYLLSTQKETPSDAEVISHQLMLRAGMIRKLA---SGLYTWLPTGVRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    EI  P V    LWQ+SG W+ Y   +  +       +  R F L P +    
Sbjct: 60  EMNNAGAVEILMPVVQPADLWQESGRWEEYGPELLRI-----ADRHERPFVLGPTHEEVV 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNE 403
             +  + L SY++LP+ L +  + +R+E      G+MR R F   DA+ F  ++E +   
Sbjct: 115 TDLIRNELSSYKQLPLNLYQIQTKFRDEVRPRF-GVMRSREFIMKDAYSFHVSQESLQET 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   G +   V+  T       S      A++    V+ +  +     I
Sbjct: 174 YDAMYRAYSQIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVIFSTDSDYAANI 233

Query: 464 NTGVLLGEG 472
                +   
Sbjct: 234 ELAEAVAPA 242



 Score = 84.4 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 57/167 (34%), Gaps = 13/167 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           I R  + G I Q+         A             ++    +G  I R +   IE    
Sbjct: 405 IKRGIEVGHIFQLGTKYSDALKASVQGEDG---RNQVMSMGCYGIGITRVVAAAIEQNHD 461

Query: 545 N----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +     P  L+P +  +  +         E A+E+   L++  + +  D R E       
Sbjct: 462 DRGIIWPDALAPFEVAILPMNMQKSFRVKELAEELYATLRAKGVEVILDDRKERPGVMFA 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  +  +P  I+ GD+    + I  +   +   Q +   + +  L K
Sbjct: 522 DMELIGVPHTIVIGDRNLDNQEIEYKSRRAGEKQMIKQDEIVDFLLK 568


>gi|19112954|ref|NP_596162.1| cytoplasmic proline-tRNA ligase Prs1 (predicted)
           [Schizosaccharomyces pombe 972h-]
 gi|74582353|sp|O60155|YHY6_SCHPO RecName: Full=Putative prolyl-tRNA synthetase C19C7.06; AltName:
           Full=Proline--tRNA ligase; Short=ProRS
 gi|3218410|emb|CAA19574.1| cytoplasmic proline-tRNA ligase Prs1 (predicted)
           [Schizosaccharomyces pombe]
          Length = 716

 Score =  148 bits (372), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 74/427 (17%), Positives = 148/427 (34%), Gaps = 69/427 (16%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-----KDDY 291
             +      ++++  + D+     D SG        + I++ +  +  ++I     ++ Y
Sbjct: 210 RKDADFPNWYQQVLTKSDMIEY-YDISGCYILKPWSYSIWEAIQGWFDKEIKKLGVRNGY 268

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
                  V  + L ++  H + +   +  V  A  +  D    A++P +       +   
Sbjct: 269 ---FPLFVSSKVLEKEKDHVEGFAPEVAWVTRAGTSELD-EPIAIRPTSETVMYPYYAKW 324

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNL 410
           ++S+R+LP++L ++ SV R E        +R R F   + H    T E    E  +I +L
Sbjct: 325 IRSHRDLPLKLNQWNSVVRWEFKNP-QPFLRTREFLWQEGHTAHMTLEGATEEVHQILDL 383

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
              IY D     ++  + +  EK  G                          + T  + G
Sbjct: 384 YARIYTDLLAVPVIKGVKSENEKFAG-------------------------GMFTTTVEG 418

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHP------VMIH 524
               Y P          GR  Q  T        S+     V   + +  P      + + 
Sbjct: 419 ----YIPT--------TGRGIQGATSHCLGQNFSKMFNIVVEDPNAEIGPTGERPKLFVW 466

Query: 525 RAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTTIT----------SSAVEYAQE 570
           +  +G   R IG+ +     +  L L P    +Q++V              +    +  +
Sbjct: 467 QNSWGLSTRTIGVAVMVHGDDKGLKLPPAIALVQSVVVPCGITNKTTDQERNEIEGFCSK 526

Query: 571 IANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
           +A+ L +  +  E D R  T  YK     +K +P+ +  G  +A +  +   R  +    
Sbjct: 527 LADRLNAADIRTEADLRAYTPGYKFSHWEMKGVPLRLEYGPNDAKKNQVTAVRRDTFEKI 586

Query: 631 KVSLLDA 637
            V L + 
Sbjct: 587 PVPLNNL 593


>gi|258516344|ref|YP_003192566.1| prolyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
 gi|257780049|gb|ACV63943.1| prolyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
          Length = 572

 Score =  148 bits (372), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 51/223 (22%), Positives = 91/223 (40%), Gaps = 11/223 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  +        E+E   H+ L R   +       +GV  +     ++   +   +R 
Sbjct: 3   ASQLLIPTLRETPAEAEVISHKLLLRAGYIR---RSAAGVYTYLPLAQRVLSKIKRIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +EI  P +    LWQ+SG WD Y   +F +K      +  R FAL P +    
Sbjct: 60  EMDRQGGQEILMPIMQPAELWQESGRWDVYGPELFRLKD-----RHGRDFALGPTHEEII 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
            A+    L SY++LP+ L +  + YR+E      GL+R R F   D + F   E   +  
Sbjct: 115 TALVKSELSSYKQLPLLLYQIQNKYRDERRPRF-GLLRGREFIMKDLYSFDADEAGLDIT 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
             K+++  + I++  G     V+  +       +      AE+
Sbjct: 174 YRKMYDAYVRIFQRCGLRFRPVEADSGAIGGSDTHEFMVLAES 216



 Score = 64.4 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 14/130 (10%), Positives = 41/130 (31%), Gaps = 6/130 (4%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPL 548
           +  + G +    +  S+         + K    ++     G        + ++   N   
Sbjct: 404 KGIEVGQVFKLGDKYSKSLEATFQDENGKTRHYVMGCYGIGVSRTMAAAIEQHNDLNGIT 463

Query: 549 WLS---PIQAIVTTITSS---AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
           W +   P   ++  +       ++ ++ +        + +  D R E    K ++  +  
Sbjct: 464 WPAAIAPFHLVIVPVNVKDQALMDISEVLYRSFLESGVEVVLDDRPERPGVKFKDADLVG 523

Query: 603 IPIIIICGDK 612
            P+ +  G K
Sbjct: 524 YPLRLTVGKK 533


>gi|119482073|ref|XP_001261065.1| prolyl-tRNA synthetase [Neosartorya fischeri NRRL 181]
 gi|119409219|gb|EAW19168.1| prolyl-tRNA synthetase [Neosartorya fischeri NRRL 181]
          Length = 652

 Score =  148 bits (372), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 84/421 (19%), Positives = 158/421 (37%), Gaps = 68/421 (16%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRAN 317
            D SG        + I++ + ++   +IK    +  + P  + + + Q +  H + + A 
Sbjct: 114 YDVSGCFILKPASYFIWEEIQNWFNAEIKKVGVKNCSFPLFVSEDVLQREKDHIEGFAAE 173

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           +  V  A +T  + +  A++P +       +   ++S+R+LP++L ++ SV R E     
Sbjct: 174 VAWVTHAGNTPLEKK-IAIRPTSETVMYPYYAKWIRSHRDLPLKLNQWNSVVRWEFK-HP 231

Query: 378 HGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
              +R R F   + H    T+E    E L +  L   IY++     ++    T  EK  G
Sbjct: 232 QPFLRTREFLWQEGHTAHLTEEAAREEVLHMLGLYARIYEELLAVPVVKGQKTEKEKFAG 291

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
                                                 Y    E  +  A GR  Q GT 
Sbjct: 292 G------------------------------------LYTTTVEGYIP-ATGRGIQGGTS 314

Query: 497 Q-VDFNLPSRFNAFYVNSH---SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
             +  N    F     +      EK  P+ + +  +G   R +G+M+     N  L L P
Sbjct: 315 HGLGQNFSKMFGITVEDPSAKPDEKKPPLYVWQNSWGLSTRTLGVMVMIHSDNRGLVLPP 374

Query: 553 ----IQAIVTTI------TSSAVE--YAQ--EIANLLKSHHLSIETDFR-NETINYKIRE 597
                Q I+  +      +    E  YA+   + +LLK   +  ++D R   +  +K  +
Sbjct: 375 RVAETQTIIVPVGITAKTSDEEREKLYAEIDSLVSLLKVAGIRADSDKREGYSPGWKFND 434

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRF---GSTTTQKVSLLD---AIPILTKESLPPDCQ 651
             ++ +P+ I  G  E++ R +   R    G      + + +   A+P L  E++  D  
Sbjct: 435 WELRGVPLRIEFGPGESAGRYVTAARRDIPGKDGKSTIPIDELSTAVPALL-ETIHKDLY 493

Query: 652 K 652
           K
Sbjct: 494 K 494


>gi|239982632|ref|ZP_04705156.1| prolyl-tRNA synthetase [Streptomyces albus J1074]
 gi|291454473|ref|ZP_06593863.1| prolyl-tRNA synthetase 1 [Streptomyces albus J1074]
 gi|291357422|gb|EFE84324.1| prolyl-tRNA synthetase 1 [Streptomyces albus J1074]
          Length = 564

 Score =  148 bits (372), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 59/323 (18%), Positives = 119/323 (36%), Gaps = 21/323 (6%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++E   H+ L R   +   A    G+  W   G K+   +   +R +
Sbjct: 8   SRLMVKTLRDDPADAETISHKLLVRAGYVRRTAA---GIWSWLPLGKKVLDNISHIVREE 64

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E+  P +L +  ++ SG W+ Y   +F +K      +    + L P +     
Sbjct: 65  MDAIGAQEVLLPALLPKEPYEASGRWEEYGDLLFRLKD-----RKGADYLLGPTHEEIFT 119

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            V      SY++LPV L +  + YR+E      G++R R F   D++ F T ++   E  
Sbjct: 120 QVVKDQCTSYKDLPVMLYQIQTKYRDEARPR-SGVLRGREFQMKDSYSFDTTDEGLEESY 178

Query: 406 KIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA---ENIMKGVLDTIKNSSQD 461
           ++H      I+   G +  +V   +       S+     A   E+      +    ++ +
Sbjct: 179 QLHRAAYQKIFARLGLDYRIVSAVSGAMGGSASEEFLAPAPAGEDTFADCPNCSYAANTE 238

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
            +   +   EGA +GP  E  L        +     +     +      V    E     
Sbjct: 239 AVTFALAPVEGAEHGP-VEV-LDTPDTPTIETLAAHLGVPASATLKNLLVKVDGE----- 291

Query: 522 MIHRAVFGSIERFIGIMIENFKG 544
           ++   V G  +  +G + E+   
Sbjct: 292 IVAVGVPGHRDVDLGKLGEHLAP 314



 Score = 89.5 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 26/164 (15%), Positives = 66/164 (40%), Gaps = 12/164 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFK- 543
           + R  + G I Q+       F    +    ++  PV +    +G  + R +  + E    
Sbjct: 404 LDRAIEIGHIFQLGRKYADTFQLDVL---GQQGKPVRVTMGSYGIGVSRAVAALAEQTAD 460

Query: 544 GNLPLWLSPIQA----IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREH 598
           G    W + +      +V    +   E A E++  L +  + +  D R   +   K  + 
Sbjct: 461 GQGLCWPAEVAPADVHVVAAGKALQTELALEVSEKLNAAGVRVLVDDRAGVSPGVKFTDA 520

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +  +P I++ G + +++  + ++   +   +++ + +A+  LT
Sbjct: 521 ELIGVPKILVAGRR-SADGIVELKDRRTGEREELPVAEAVARLT 563


>gi|295399847|ref|ZP_06809828.1| prolyl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93]
 gi|294978250|gb|EFG53847.1| prolyl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93]
          Length = 567

 Score =  148 bits (372), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 55/244 (22%), Positives = 95/244 (38%), Gaps = 27/244 (11%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E + H+ L R      I +  SGV  +   G ++ Q + + +R ++      E+  P 
Sbjct: 17  DAEVKSHQLLLRAG---FIRQSASGVYTFLPLGQRVLQKVEAIIREEMNRAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQQSG W SY   +  +K      +  R FAL P +      +    +KSY+ L
Sbjct: 74  LQPAELWQQSGRWYSYGPELMRLKD-----RHERDFALGPTHEEMITTLVRDEVKSYKRL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKD 417
           P+ L +    +R+E      GL+R R F   DA+ F T  E +     K++    +I++ 
Sbjct: 129 PLTLYQIQVKFRDEKRPRF-GLLRGREFIMKDAYSFHTSQESLDETYNKMYEAYSNIFRR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
            G     V   +       +             VL  I   +       +   + + Y  
Sbjct: 188 CGLNFRAVIADSGAIGGKDTHEF---------MVLSEIGEDT-------IAYSDASDYAA 231

Query: 478 KFEY 481
             E 
Sbjct: 232 NIEM 235



 Score = 76.7 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 61/163 (37%), Gaps = 11/163 (6%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G +  +        NA Y++ +      +M    +   + R +  + E F     
Sbjct: 404 RGIEVGHVFKLGTRYSEALNATYLDENGRSQTMIMGCYGI--GVSRLVAAIAEQFADENG 461

Query: 546 --LPLWLSPIQAIVTT---ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              P+ ++P    + T    +    + A E    L+   L +  D R E    K  +  +
Sbjct: 462 LVWPVAVAPFHVHLITANAKSEEQRQLADEWYEKLRQAGLEVLYDDRPERAGVKFADSDL 521

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             IP+ +  G + A E  + ++   +  + +V + + I  + +
Sbjct: 522 IGIPVRVTVGKR-AGEGVVEVKVRQTGESVEVPVHELIDTIQR 563


>gi|312173361|emb|CBX81615.1| Prolyl-tRNA synthetase [Erwinia amylovora ATCC BAA-2158]
          Length = 572

 Score =  148 bits (372), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 54/249 (21%), Positives = 100/249 (40%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            TQ  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TTQYLLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGLRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    EI+ P V    LWQ+SG W+ Y   +  +    D     R F L P +    
Sbjct: 60  EMNNAGAIEISMPVVQPADLWQESGRWEQYGPELLRLVDRSD-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+ L +  + +R+E      G+MR R F   DA+ F T +    E 
Sbjct: 115 TDLIRNELSSYKQLPLNLFQIQTKFRDEVRPRF-GVMRSREFIMKDAYSFHTSQGSLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +H      +   G +   V+  T       S      A++    ++ + ++     I
Sbjct: 174 YDAMHRAYSQSFSRMGLDFRAVQADTGSIGGNASHEFQVLAQSGEDDIVFSSESDYAANI 233

Query: 464 NTGVLLGEG 472
                L   
Sbjct: 234 EMAEALPPA 242



 Score = 86.8 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 58/168 (34%), Gaps = 13/168 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           I R  + G I Q+         A             ++    +G  I R +   IE N  
Sbjct: 405 IKRGIEVGHIFQLGTKYSEAMKASVQGEDG---RNQILTMGCYGIGITRIVAAAIEQNHD 461

Query: 544 GNLPLW---LSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
               +W   L+P Q  +  +         E A+ + + L++  + +  D R E       
Sbjct: 462 ERGIIWSPALAPFQVAILPMNMQKSFRVKELAEALYHQLRAKGIDVILDDRKERPGVMFA 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  +  +P  I+ G++      +  +   +   + +   + I  L +E
Sbjct: 522 DMELIGVPHTIVVGERHLDSEEVEYKSRRAGEKRMIKTNEIIDFLVEE 569


>gi|227327749|ref|ZP_03831773.1| prolyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 572

 Score =  148 bits (372), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 46/251 (18%), Positives = 96/251 (38%), Gaps = 15/251 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYMLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGLRVLRKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E++ P V    LW +SG WD Y   +       +     R F L P +    
Sbjct: 60  EMNNAGAIEVSMPVVQPADLWVESGRWDQYGPELLRFVDRGE-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + + SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++     
Sbjct: 115 TDLIRNEVSSYKQLPLNFFQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHTSQESLQVT 173

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG---SDALWDDAENIMKGVLDTIKNSSQD 461
                +  +  K F    +  +        +G   S      A +    ++ + ++    
Sbjct: 174 YDA--MYAAYSKIFSRMDLDFRAVQADTGSIGGNASHEFQVLATSGEDDIVFSTESDYAA 231

Query: 462 RINTGVLLGEG 472
            I     +   
Sbjct: 232 NIELAEAVAPK 242



 Score = 85.6 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 50/164 (30%), Gaps = 11/164 (6%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           I R  + G I Q+         A             M    +   + R +   IE     
Sbjct: 405 IKRGIEVGHIFQLGSKYSEALKATVQGEDGRNQTLTMGCYGI--GVTRVVAAAIEQNHDE 462

Query: 546 ----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
                P  ++P    +  +         E A++I   L++  + +  D R E       +
Sbjct: 463 RGIIWPDAIAPFHVAILPMNMHKSFRVKEVAEDIYQQLRAKGIEVLLDDRKERPGVMFAD 522

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
             +  +P  I+ GD+      I  +       Q +   + I  L
Sbjct: 523 MELIGVPHTIVIGDRNLDSEEIEYKNRRGGEKQMIKTSEIIDFL 566


>gi|187918269|ref|YP_001883832.1| prolyl-tRNA synthetase [Borrelia hermsii DAH]
 gi|119861117|gb|AAX16912.1| prolyl-tRNA synthetase [Borrelia hermsii DAH]
          Length = 491

 Score =  148 bits (372), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 79/425 (18%), Positives = 152/425 (35%), Gaps = 65/425 (15%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE   + +  + ++  L   +     ++     G+ I++ + S +  K K+  +E    P
Sbjct: 12  EEEFSKWYLDIVQKAKLIDYSPVKGCMVI-MPYGYAIWERIKSILDDKFKETGHENAYFP 70

Query: 298 QVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
            ++     + +  H   +   +  +  A           L+P +      +++  +KSYR
Sbjct: 71  LLIPYEFLEREKEHVKGFSPELAVITTAGGEEL-AEPLVLRPTSETIIWNMYSKWIKSYR 129

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIY 415
           +LPV++ ++ ++ R E        +R   F   + H    T ++   E L I NL     
Sbjct: 130 DLPVKINQWANIIRWEKR--TRPFLRTTEFLWQEGHTAHETAKEALEETLFILNLYKRFV 187

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           +D+    +     T  EK  G                                    A  
Sbjct: 188 EDYLAIPVFCGQKTEREKFAG------------------------------------AVS 211

Query: 476 GPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
               E +++D   +  Q GT      N    F+  + N   E  +   +    +G   R 
Sbjct: 212 TYTIEALMQD--KKALQAGTSHYLGLNFAKAFDVKFQNKKGEMDY---VFATSWGVSTRL 266

Query: 535 IGIMI----ENFKGNLPLWLSPIQAIVTTI-------TSSAVEYAQEIANLLKSHHLSIE 583
           IG +I    +N    LP  ++PI+ I+  I           +EY+  I NLLK     +E
Sbjct: 267 IGALIMVHSDNKGLILPPKIAPIEIIIVPIFKRDGDANQKILEYSIIIFNLLKEAKFRVE 326

Query: 584 TDFRN--ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRF--GSTTTQKVSLLDAIP 639
            D R+   +  ++     +K IPI I  G  +     + + R      +  +VS+ +   
Sbjct: 327 LD-RDVKNSPGFRFAAAELKGIPIRIEIGSNDIFMNCVTVARRDKDKNSKYQVSVEELSS 385

Query: 640 ILTKE 644
            +  E
Sbjct: 386 KIRHE 390


>gi|261822741|ref|YP_003260847.1| prolyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
 gi|261606754|gb|ACX89240.1| prolyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
          Length = 572

 Score =  148 bits (372), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 46/251 (18%), Positives = 96/251 (38%), Gaps = 15/251 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYMLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGLRVLRKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E++ P V    LW +SG WD Y   +       +     R F L P +    
Sbjct: 60  EMNNAGAIEVSMPVVQPADLWVESGRWDQYGPELLRFVDRGE-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + + SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++     
Sbjct: 115 TDLIRNEVSSYKQLPLNFFQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHTSQESLQTT 173

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG---SDALWDDAENIMKGVLDTIKNSSQD 461
                +  +  K F    +  +        +G   S      A +    ++ + ++    
Sbjct: 174 YDA--MYAAYSKIFSRMDLDFRAVQADTGSIGGNASHEFQVLATSGEDDIVFSTESDYAA 231

Query: 462 RINTGVLLGEG 472
            I     +   
Sbjct: 232 NIELAEAVAPK 242



 Score = 82.1 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 50/164 (30%), Gaps = 11/164 (6%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           I R  + G I Q+         A             M    +   + R +   IE     
Sbjct: 405 IKRGIEVGHIFQLGSKYSEALKATVQGEDGRNQTLTMGCYGI--GVTRVVAAAIEQNHDE 462

Query: 546 ----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
                P  ++P    +  +         E A++I   L++  + +  D R E       +
Sbjct: 463 RGIIWPDAIAPFHVAILPMNMHKSFRVKEVAEDIYQQLRAKGIEVLLDDRKERPGVMFAD 522

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
             +  +P  I+ GD+      I  +       Q +   + I  L
Sbjct: 523 MELIGVPHTIVIGDRNLDSEEIEYKNRRIGEKQMIKTGEIIDFL 566


>gi|325982765|ref|YP_004295167.1| prolyl-tRNA synthetase [Nitrosomonas sp. AL212]
 gi|325532284|gb|ADZ27005.1| prolyl-tRNA synthetase [Nitrosomonas sp. AL212]
          Length = 569

 Score =  148 bits (372), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 49/220 (22%), Positives = 88/220 (40%), Gaps = 11/220 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  ++       E+E   H+ + R   +  +   GSG+  W   G ++ + + + +R +
Sbjct: 4   SQFFVSTLKEAPAEAELISHKLMLRAGLIKRL---GSGLYTWMPLGLRVLRKIENIIREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      EI  P +    LWQ++G WD +   M  +K      +    F   P +     
Sbjct: 61  MNSSGAVEILMPAIQPAELWQETGRWDVFGLQMLKIKD-----RHKHDFCFGPTHEEIIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
                 +KSYR+LP+   +  + +R+E      G+MR R F   DA+ F T E    +  
Sbjct: 116 DTVRKEIKSYRQLPLNFYQIQTKFRDEIRPRF-GVMRAREFIMKDAYSFHTNEDSLMQTY 174

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
           + ++     I+   G +   V   T      GS      A
Sbjct: 175 QLMYETYSRIFTRIGLQFRAVSADTGAIGGSGSHEFHVLA 214



 Score = 76.4 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 57/163 (34%), Gaps = 13/163 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGNL 546
           R  + G I Q+         A +++      +   +    +G  + R +   IE      
Sbjct: 403 RGIEVGHIFQLRTKYSKIMKATFLDESGSTQY---MEMGCYGIGVSRIVAAAIEQNHDEY 459

Query: 547 ----PLWLSPIQAIVTTITSSAVEYAQEIANLL----KSHHLSIETDFRNETINYKIREH 598
               P  ++P Q  +  I        +EI   L       H+ +  D R+E       + 
Sbjct: 460 GIIFPAAIAPFQLAIIPIGLQKNPQVKEIVEKLYQQFLDAHIEVLLDDRDERPGVMFADM 519

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            +  IP  I+ G++   + +I  +     + + + + +  P +
Sbjct: 520 ELMGIPHRIVIGERGLKQSTIEYQGRKDRSPEAIFIDEIFPFI 562


>gi|220961898|gb|ACL93386.1| threonyl-tRNA synthetase [Streptococcus thermophilus]
          Length = 165

 Score =  148 bits (372), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 73/167 (43%), Positives = 121/167 (72%), Gaps = 5/167 (2%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ-PFSSDELAQIEKKMQE 128
           L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D +    S+++L +IE++M++
Sbjct: 1   LPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNQSGQISNEDLPRIEEEMKK 60

Query: 129 IIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKE-NVTLYRQGEWFDLCRGPH 187
           I+  + P +++ ++ ++ARE+F+   + YK+E++E     +  +T+YRQGE+ DLCRGPH
Sbjct: 61  IVKENFPSIREEVTKDEAREIFK--NDPYKLELIEEHSEDDGGLTIYRQGEYVDLCRGPH 118

Query: 188 VRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
           V STG+++ F  L  VAGAYWRG+S+  M+ RIYGTAW  +++L  Y
Sbjct: 119 VPSTGRIQIFHLL-NVAGAYWRGNSDNAMMQRIYGTAWFDKKDLKAY 164


>gi|268576408|ref|XP_002643184.1| C. briggsae CBR-PRS-1 protein [Caenorhabditis briggsae]
 gi|187040442|emb|CAP20827.1| CBR-PARS-1 protein [Caenorhabditis briggsae AF16]
          Length = 579

 Score =  148 bits (372), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 70/435 (16%), Positives = 144/435 (33%), Gaps = 57/435 (13%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
            +Q L       +E+    + ++  + ++     D SG        + +++ + ++    
Sbjct: 82  KKQTLLGVGTKKDENYSEWYSEVITKAEMIEY-YDVSGCYVLRPWSFAVWEAIQAWFDSG 140

Query: 287 IKD-DYEEINTPQ-VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           IK    +    P  V +  L ++  H   +   +  V  A  +       A++P +    
Sbjct: 141 IKKLGVKNCYFPMFVSNAALEREKTHIADFAPEVAWVTRAGQSEM-AEPIAIRPTSETVM 199

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNE 403
              +   ++S+R+LP++L ++ +V R E        +R R F   + H  F        E
Sbjct: 200 YPSYKKWVQSHRDLPIKLNQWCNVVRWEFKHPT-PFLRTREFLWQEGHTAFANPSDAEKE 258

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             +I +L   +Y D     ++    +  EK  G D                         
Sbjct: 259 VFQILDLYAGVYNDLLAIPVVKGRKSEKEKFAGGD------------------------- 293

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
                      +    E  +    GR  Q  T        S+         +++      
Sbjct: 294 -----------FTTTVEAYV-ACNGRGIQGATSHHLGQNFSKMFDISYEDPAKEGERAFA 341

Query: 524 HRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTTITSSAV------EYAQEIAN 573
            +  +G   R IG M+     +  L L P    +Q IV  +           +   ++  
Sbjct: 342 WQNSWGLSTRTIGAMVMIHGDDKGLILPPRVAAVQVIVVPVGFKTENKEWLFDAVDKVTK 401

Query: 574 LLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
            L +  +  E D R N    +K     +K +PI    G  + ++  +      +   +++
Sbjct: 402 DLVAGGIKAEHDLRENYNAGWKFNHWELKGVPIRFEVGPNDLAKNQVTAVIRHNGEKRQM 461

Query: 633 SLL---DAIPILTKE 644
           SL    +A+  L  E
Sbjct: 462 SLDGLSEAVKTLLDE 476


>gi|160872889|ref|ZP_02063021.1| prolyl-tRNA synthetase [Rickettsiella grylli]
 gi|159121688|gb|EDP47026.1| prolyl-tRNA synthetase [Rickettsiella grylli]
          Length = 572

 Score =  148 bits (372), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 46/221 (20%), Positives = 94/221 (42%), Gaps = 11/221 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +   L        ++E + H+ + R   +  +A   SG+  W   G ++ + + + +R +
Sbjct: 4   SHFYLPTLKEAPADAEIKSHQLMLRAGMIRKVA---SGIYSWLPLGLRVLRKVETIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E+  P +    LWQ+S  W++Y   +  +     T +  R F L P +     
Sbjct: 61  MNRIHAQEVLLPILQPAELWQESERWEAYGPELLRL-----TDRHQRAFCLGPTHEEIIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           A+  H ++SY++LP+   +  + +R+E      G+MR R F   DA+ F   +   +E  
Sbjct: 116 ALVRHEVRSYKQLPLIFYQIQTKFRDEIRPRF-GVMRAREFMMKDAYSFHPDKTSLSETY 174

Query: 406 KIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
           ++ +     I+   G +  +V   T       S      A+
Sbjct: 175 QMMHASYCRIFTRLGLKFRVVLADTGNIGGSQSHEFQVLAQ 215



 Score = 79.4 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/170 (18%), Positives = 64/170 (37%), Gaps = 10/170 (5%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN--- 545
           R  + G I    N  +      + +   +  P+ +     G I R +G  IE    +   
Sbjct: 404 RGIEVGHIFQLGNKYACAMNARITTSHAREIPMEMGCYGIG-ISRVVGGAIEQCHDDQGI 462

Query: 546 -LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
             P  ++P Q ++  I      S  E A  +   L+   + +  D R E       ++ +
Sbjct: 463 IWPSAMAPFQVVIIPIAYHRNRSVKEAADTLYQQLQQARIDVLLDDRKERPGKLFADNDL 522

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL-TKESLPPD 649
             IP  ++  +K   E+++  +         V+L + +  L  K ++P D
Sbjct: 523 IGIPHRLVINEKMILEKTVAYKARIEKHEHPVNLENILNFLHQKINIPRD 572


>gi|92111786|gb|ABE73637.1| threonyl-tRNA synthetase [Streptococcus vestibularis]
 gi|92111810|gb|ABE73649.1| threonyl-tRNA synthetase [Streptococcus salivarius]
 gi|92111822|gb|ABE73655.1| threonyl-tRNA synthetase [Streptococcus vestibularis]
          Length = 165

 Score =  148 bits (372), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 74/167 (44%), Positives = 121/167 (72%), Gaps = 5/167 (2%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQIEKKMQE 128
           L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D +    S+++L +IE++M++
Sbjct: 1   LPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNQAGQISNEDLPRIEEEMKK 60

Query: 129 IIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKE-NVTLYRQGEWFDLCRGPH 187
           I+  + P +++ ++ ++ARE+F+   + YK+E++E     E  +T+YRQGE+ DLCRGPH
Sbjct: 61  IVKENFPSIREEVTKDEAREIFK--NDPYKLELIEEHSEDEGGLTIYRQGEYVDLCRGPH 118

Query: 188 VRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
           V STG+++ F  L  VAGAYWRG+S+  M+ RIYGTAW  +++L  Y
Sbjct: 119 VPSTGRIQVFHLL-NVAGAYWRGNSDNAMMQRIYGTAWFDKKDLKAY 164


>gi|302803187|ref|XP_002983347.1| hypothetical protein SELMODRAFT_118068 [Selaginella moellendorffii]
 gi|300149032|gb|EFJ15689.1| hypothetical protein SELMODRAFT_118068 [Selaginella moellendorffii]
          Length = 495

 Score =  148 bits (372), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 61/395 (15%), Positives = 137/395 (34%), Gaps = 61/395 (15%)

Query: 260 EDGSGVIFWHRKGWKIFQT-------LISYMRRKIKD-DYEEINTPQVLDQHLW-QQSGH 310
            D SG        + I+         L  ++  +IK+   E    P  + +     +  H
Sbjct: 49  YDISGCYILLPWSYAIWDVTLFLLSFLQRFLDGEIKNLGVENAYFPLFVSERALVTEKKH 108

Query: 311 WDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYR 370
            + +   +  V  + ++  ++   A++P +      +F   ++ +R+LP ++ ++ +V R
Sbjct: 109 VEGFAPEVAWVTKSGESALEV-PIAIRPTSETVMYPIFAKRIRGHRDLPFKINQWCNVVR 167

Query: 371 NEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
            E        +R R F   + H  + TKE+   E   + +L   +Y++            
Sbjct: 168 WEFKHPT-PFIRSREFLWQEGHTAYATKEEADEEVYAVLDLYRRVYEEL----------- 215

Query: 430 RPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGR 489
                                    +       + + V    G  Y    E  +    GR
Sbjct: 216 -------------------------LAIPVIKGVKSEVEKFAGGLYTTTVEAFIP-LTGR 249

Query: 490 DWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPL 548
             Q  T   +  N    F+  + +   E+     + +  +G   R IG+MI     +   
Sbjct: 250 GIQGATSHCLGQNFAEMFDIVFEDEKRERKK---VWQNSWGLTTRTIGVMIMVHGDDKVP 306

Query: 549 WLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIII 607
           +           T    + A   A  LK+  L ++ D R+  +  +K     +K +P+ +
Sbjct: 307 YKD-------VDTQKLFDAAASTARQLKAAGLRVKEDTRDNYSPGWKYSNWELKGVPLRV 359

Query: 608 ICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             G ++ +   + + R  +   + V +   +  ++
Sbjct: 360 EIGPRDLANSQVRVVRRDTGAKEDVPMDKIVDRIS 394


>gi|326390601|ref|ZP_08212157.1| phosphoribulokinase/uridine kinase [Thermoanaerobacter ethanolicus
           JW 200]
 gi|325993426|gb|EGD51862.1| phosphoribulokinase/uridine kinase [Thermoanaerobacter ethanolicus
           JW 200]
          Length = 547

 Score =  148 bits (372), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 46/204 (22%), Positives = 91/204 (44%), Gaps = 4/204 (1%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDP-VREGSIEIIT 63
           +K+T   G++  +P      ++A+          VA  ++ ++ DL+   +++ ++E + 
Sbjct: 1   MKITIL-GNVYEYPEGTKLENIAKDFEHRYNGIIVAAKVDNELRDLNYTVLKDSTVEFVD 59

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
                   + R S   +  +AV+ + P   V I   +  G Y +       ++  ++ I+
Sbjct: 60  TTIEEGTRIYRRSLTFVFIKAVKELLPGATVTIEHSLGKGLYCEIHG-YSLNNKIVSMIK 118

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           K+M+EII +D    ++ L  E+A +LFE +    KV++ +    K+ V +Y      D  
Sbjct: 119 KRMEEIIEKDLKIERKMLPKEEAIKLFEKEGLTEKVKLFKD-TDKDKVPVYYCDGTVDFF 177

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAY 207
             P V STG +K F       G  
Sbjct: 178 YSPCVPSTGYLKVFDIRFYFPGII 201


>gi|92111808|gb|ABE73648.1| threonyl-tRNA synthetase [Streptococcus salivarius]
          Length = 165

 Score =  148 bits (372), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 75/167 (44%), Positives = 122/167 (73%), Gaps = 5/167 (2%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQIEKKMQE 128
           L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D E    S+++L++IE++M++
Sbjct: 1   LPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNEAGQISNEDLSRIEEEMKK 60

Query: 129 IIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKE-NVTLYRQGEWFDLCRGPH 187
           I+  + P +++ ++ ++ARE+F+   + YK+E++E     E  +T+YRQGE+ DLCRGPH
Sbjct: 61  IVKENFPSIREEVTKDEAREIFK--NDPYKLELIEEHSEDEGGLTIYRQGEYVDLCRGPH 118

Query: 188 VRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
           V STG+++ F  L  VAGAYWRG+S+  M+ RIYGTAW  +++L  Y
Sbjct: 119 VPSTGRIQVFHLL-NVAGAYWRGNSDNAMMQRIYGTAWFDKKDLKAY 164


>gi|115898425|ref|XP_786677.2| PREDICTED: similar to glutamyl-prolyl-tRNA synthetase
            [Strongylocentrotus purpuratus]
 gi|115974011|ref|XP_001188946.1| PREDICTED: similar to glutamyl-prolyl-tRNA synthetase
            [Strongylocentrotus purpuratus]
          Length = 1621

 Score =  148 bits (372), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 70/436 (16%), Positives = 149/436 (34%), Gaps = 61/436 (13%)

Query: 227  TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
             +Q          E     + ++  + ++     D SG        + I++ ++++    
Sbjct: 1131 KKQTRLGLEAKKGEDLSEWYSQVITKSEMIEY-YDVSGCYVLRPWSYSIWEKIVAFFDAG 1189

Query: 287  IKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
            IK+   E    P  + Q   + +  H   +   +  V       +     A++P +    
Sbjct: 1190 IKELGVENTYFPIFVSQAALEREKEHIADFSPEVAWVT-RSGQSELAEPIAIRPTSETAM 1248

Query: 345  VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNE 403
               ++  ++S+R+LP++L ++ +V R E        +R R F   + H  +  +E+   E
Sbjct: 1249 YTSYSKWVQSHRDLPIKLNQWCNVVRWEFK-HPQPFLRTREFLWQEGHTAWANREECVEE 1307

Query: 404  CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
               I  L   +Y+      ++    T  EK  G D                         
Sbjct: 1308 VYTILELYAQVYEHLLAIPVVRGEKTLKEKFAGGD------------------------- 1342

Query: 464  NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVM 522
                       +    E  +K A GR  Q  T   +  N    F+  + +          
Sbjct: 1343 -----------FTTTVEAFIK-ASGRAIQGATSHHLGQNFAKMFDIKFEDPDPNAHK--Y 1388

Query: 523  IHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTT----------ITSSAVEYA 568
            + +  +G   R IG+M      +  L L P    +QAIV              +  ++  
Sbjct: 1389 VFQNSWGITTRTIGVMCMVHGDDQGLVLPPRVACVQAIVIPCGITAKTTDEQKNKLLDKC 1448

Query: 569  QEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGST 627
                 +LK+  +  ++D R+  +  +K     +K +P+ I  G ++ S++     R  + 
Sbjct: 1449 HNYVKILKAGGIRAQSDLRDNYSPGWKFNHWELKGVPVRIEIGPRDMSKQEFIACRRDNG 1508

Query: 628  TTQKVSLLDAIPILTK 643
                     ++  +T+
Sbjct: 1509 AKTTFPEAQSVAKVTE 1524


>gi|293611014|ref|ZP_06693313.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292826666|gb|EFF85032.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 571

 Score =  148 bits (372), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 74/428 (17%), Positives = 149/428 (34%), Gaps = 49/428 (11%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++           ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   ASRFLFATLRETPNDAEVISHQLMLRAGMIRKLA---SGLYTWLPMGTRVLKKVDAIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P      LW++SG ++ Y   +   K      +    F L P +    
Sbjct: 60  EMNRSGAMEVFMPVTQPASLWEESGRYEQYGPELLRFKD-----RHTNPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + LKSY++LPV   +  + +R+E      G+MR R F   DA+ F   ++   E 
Sbjct: 115 TDMARNELKSYKQLPVNFYQIQTKFRDEIRPRF-GVMRSREFIMKDAYSFHATQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +++    I+   G +   V+  T       S      A +    +  + ++     +
Sbjct: 174 YDVMYDTYSRIFTRLGLDFRPVQADTGSIGGSASHEFHVLAASGEDDIAFSTESDYAANV 233

Query: 464 N--TGVLLGEGAFYGPKFEYILKDAIGR---DWQCGTIQVDFNLPSRFNAFYVNSHSEKC 518
                VL+ E A   P  E+ L +   +   D  C  +  D     +       +  +  
Sbjct: 234 EMAEAVLVDERA--APTQEFKLVETPNQKTIDDVCQFLNADPKQSVKALLVQGIADEKGN 291

Query: 519 HPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP------IQAIVTTITSSAVEYAQEIA 572
            PV +   V G  E     + E      PL  SP       Q     +T+          
Sbjct: 292 VPV-VALFVRGDHE-----LNEIKAEKHPLVASPLTFATEEQLQAFGLTAGFTGP----- 340

Query: 573 NLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR-RFGSTTTQK 631
             L    L++  D     ++               + G  EA + ++G+     +  ++ 
Sbjct: 341 QGLVEKGLTVIVDRAASVLSD-------------FVAGANEADKHAVGVNWERDAQISEI 387

Query: 632 VSLLDAIP 639
             L + + 
Sbjct: 388 FDLRNVVE 395



 Score = 89.1 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 59/167 (35%), Gaps = 13/167 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           I R  + G I Q+            +    +   P  +    +G  + R +   IE N+ 
Sbjct: 408 IKRGIEVGHIFQLGTKYSEALGCKVLGEDGK---PFTVTMGCYGIGVTRVVAAAIEQNYD 464

Query: 544 GNLPLWL---SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
               +W    +P +  +  +    +   +E A+ +   L++    +  D RNE    K  
Sbjct: 465 DKGIIWPQAIAPFEIAIVPMNAHKSPRTLEAAESLYAELQAQGFDVLLDDRNERPGVKFS 524

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  +  IP  I+ G+K     +   +         ++  + +  L +
Sbjct: 525 DLELMGIPHRIVIGEKGLDAGTFEYKGRRDAEASNLTKEELLAKLAR 571


>gi|71906284|ref|YP_283871.1| prolyl-tRNA synthetase [Dechloromonas aromatica RCB]
 gi|114152186|sp|Q47ID0|SYP_DECAR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|71845905|gb|AAZ45401.1| Prolyl-tRNA synthetase, bacterial [Dechloromonas aromatica RCB]
          Length = 576

 Score =  148 bits (372), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 48/220 (21%), Positives = 91/220 (41%), Gaps = 10/220 (4%)

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLF--HIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
              +Q+ +   +    D   ++++M L   +I    +G+  W   G ++ + + + +R +
Sbjct: 1   MRTSQFFFTTLKEAPADAEVISQKMMLRAGYIKRAAAGIYTWMPLGLRVLRKVENIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           + +    E+  P V    LWQ+SG W+ Y   +   K      +  R F + P +     
Sbjct: 61  MNNAGALELLMPAVQPAELWQESGRWEQYGPELLRFKD-----RHQREFVIGPTHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            V    +KSYR+LP+ L +  + +R+E      G+MR R F   D + F    + +  E 
Sbjct: 116 DVVRRDVKSYRQLPIHLYQIQTKFRDEIRPRF-GVMRGREFLMKDGYSFHASFDDLKREY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
             +++    I+   G +   V   T      GS      A
Sbjct: 175 GNMYDTYSRIFSRLGLKFRAVAADTGSIGGTGSHEFHVLA 214



 Score = 72.1 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 60/164 (36%), Gaps = 13/164 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN- 545
           R  + G I Q+        N  Y++   +     ++    +G  + R +G  IE    + 
Sbjct: 410 RGIEVGHIFQLRQKYAEALNCVYLDDSGKSQ---IMEMGCYGIGVSRIVGAAIEQGNDDK 466

Query: 546 ---LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
              LP  ++P +  +  +    + +    A ++   LK   + +  D RNE       + 
Sbjct: 467 GIILPPAIAPFEVCIVPMGYHKSEAVKASADQLYADLKKIGVDVVLDDRNERPGVMFADM 526

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +  IP  ++ G++   +     +         V+  D + +L 
Sbjct: 527 ELIGIPHRVVIGERGLKDGLFEYKSRIDAEPTMVAQTDIVTLLQ 570


>gi|297661955|ref|XP_002809493.1| PREDICTED: bifunctional aminoacyl-tRNA synthetase [Pongo abelii]
          Length = 1462

 Score =  148 bits (372), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 77/450 (17%), Positives = 149/450 (33%), Gaps = 67/450 (14%)

Query: 226  NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
              +Q         EE+    + ++  + ++     D SG        + I++ +  +   
Sbjct: 953  PKKQTRLGLEAKKEENLADWYSQVITKSEMIEYH-DVSGCYILRPWAYAIWEAIKDFFDA 1011

Query: 286  KIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPG 343
            +IK    E    P  + Q   + +  H   +   +  V  +  T       A++P +   
Sbjct: 1012 EIKKLGVENCYFPMFVSQSALEKEKTHIADFAPEVAWVTRSGKTEL-AEPIAIRPTSETV 1070

Query: 344  HVA-VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMF 401
                V+   ++S+R+LP++L ++ +V R E        +R R F   + H  F T E+  
Sbjct: 1071 MYPGVWQKWVQSHRDLPIKLNQWCNVVRWEFKHP-QPFLRTREFLWQEGHSAFATMEEAA 1129

Query: 402  NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
             E L+I +L   +Y++     ++    T  EK  G D                       
Sbjct: 1130 EEVLQILDLYAQVYEELLAIPVVKGRKTEKEKFAGGD----------------------- 1166

Query: 462  RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
                         Y    E     A GR  Q GT        S+                
Sbjct: 1167 -------------YTTTIE-AFISASGRAIQGGTSHHLGQNFSKMFEIVFEDPKTPGEKQ 1212

Query: 522  MIHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTT-----------ITSSAVE 566
              ++  +G   R IG+M      N+ L L P    +Q ++                  + 
Sbjct: 1213 FAYQNSWGLTTRTIGVMTMVHGDNMGLVLPPRVACVQVVIIPCGITKCTFLKKTKKPLIA 1272

Query: 567  YAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKK---IPIIIICGDKEASERS-IGI 621
               +    L S ++ +  D R+  +  +K      +    IPI +  G ++      + +
Sbjct: 1273 KCNDYRRRLLSVNIRVRADLRDNYSPGWKFNHWGAQGKFLIPIRLEVGPRDMKSCQFVAV 1332

Query: 622  RRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
            R   +     V+  +A   L  +++  D Q
Sbjct: 1333 R-RDTGEKLTVAENEAETKL--QAILEDIQ 1359


>gi|227114059|ref|ZP_03827715.1| prolyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 572

 Score =  148 bits (372), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 46/251 (18%), Positives = 96/251 (38%), Gaps = 15/251 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYMLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGLRVLRKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E++ P V    LW +SG WD Y   +       +     R F L P +    
Sbjct: 60  EMNNAGAIEVSMPVVQPADLWVESGRWDQYGPELLRFVDRGE-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + + SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++     
Sbjct: 115 TDLIRNEVSSYKQLPLNFFQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHTSQESLQVT 173

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG---SDALWDDAENIMKGVLDTIKNSSQD 461
                +  +  K F    +  +        +G   S      A +    ++ + ++    
Sbjct: 174 YDA--MYAAYSKIFSRMDLDFRAVQADTGSIGGNASHEFQVLATSGEDDIVFSTESDYAA 231

Query: 462 RINTGVLLGEG 472
            I     +   
Sbjct: 232 NIELAEAVAPK 242



 Score = 83.3 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 50/164 (30%), Gaps = 11/164 (6%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           I R  + G I Q+         A             M    +   + R +   IE     
Sbjct: 405 IKRGIEVGHIFQLGSKYSEALKATVQGEDGRNQTLTMGCYGI--GVTRVVAAAIEQNHDE 462

Query: 546 ----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
                P  ++P    +  +         E A++I   L++  + +  D R E       +
Sbjct: 463 RGIIWPDAIAPFHVAILPMNMHKSFRVKEVAEDIYQQLRAKGIEVLLDDRKERPGVMFAD 522

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
             +  +P  I+ GD+      I  +       Q +   + I  L
Sbjct: 523 MELIGVPHTIVIGDRNLDSEEIEYKNRRVGEKQMIKTSEIIDFL 566


>gi|92111812|gb|ABE73650.1| threonyl-tRNA synthetase [Streptococcus salivarius]
          Length = 165

 Score =  148 bits (372), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 74/167 (44%), Positives = 120/167 (71%), Gaps = 5/167 (2%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQIEKKMQE 128
           L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D +    S+++L +IE++M++
Sbjct: 1   LPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNQAGQISNEDLPRIEEEMKK 60

Query: 129 IIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKE-NVTLYRQGEWFDLCRGPH 187
           I+  + P +++ ++ ++ARE+F+   + YK+E++E     E  +T+YRQGE+ DLCRGPH
Sbjct: 61  IVKENFPSIREEVTKDEAREIFK--NDPYKLELIEEHSEDEGGLTIYRQGEYVDLCRGPH 118

Query: 188 VRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
           V STG+++ F  L  VAGAYWRG+S   M+ RIYGTAW  +++L  Y
Sbjct: 119 VPSTGRIQVFHLL-NVAGAYWRGNSENAMMQRIYGTAWFDKKDLKSY 164


>gi|89093619|ref|ZP_01166566.1| prolyl-tRNA synthetase [Oceanospirillum sp. MED92]
 gi|89082015|gb|EAR61240.1| prolyl-tRNA synthetase [Oceanospirillum sp. MED92]
          Length = 574

 Score =  148 bits (372), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 51/264 (19%), Positives = 97/264 (36%), Gaps = 12/264 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       ++E   H+ + R   +  +A   SG+  W   G +  + +   +R 
Sbjct: 3   TSQYLISTVKETPSDAEVISHQLMLRAGLIRKVA---SGLYNWLPLGLRTLRKVERIVRE 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LW++SG W+ Y   +  V       +  R F + P +    
Sbjct: 60  EMDKSGAMEVLMPAVQPAELWEESGRWEQYGPELLRVND-----RHNREFCVGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    +KSY++LP    +  + +R+E      G+MR R F   DA+ F   +    E 
Sbjct: 115 TDLIRREIKSYKQLPANFYQIQTKFRDEIRPRF-GVMRSREFIMKDAYSFHVGQDSLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +H    +I+   G +   V   T       S      A++    +  +  +     +
Sbjct: 174 YDVMHQTYTNIFTRLGLDFRPVLADTGSIGGATSHEFHVLADSGEDDIAFSNVSDYAANV 233

Query: 464 NTGVLLG-EGAFYGPKFEYILKDA 486
                +  EG    P  E    D 
Sbjct: 234 ELAEAMAPEGDLAAPTVEMTTVDT 257



 Score = 81.0 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 25/169 (14%), Positives = 61/169 (36%), Gaps = 15/169 (8%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           I R  + G I Q+         A  ++ + +    V+++   +G  + R I   IE    
Sbjct: 405 IKRGIEVGHIFQLGQKYSEALKAEVLDQNGKS---VVMNMGCYGIGVTRVIAAAIEQNHD 461

Query: 545 N----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNET--INYK 594
           +     P  ++P    +  +    ++   E    +   L+     +  D R++      K
Sbjct: 462 DGGIIWPEAIAPFHIALIPLQYDKSAEVKELTDRLYQELQQAGYDVIVDDRDKKTSPGVK 521

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             +  +  IP  ++   +     ++  +       Q V + + +P+L +
Sbjct: 522 FADMDLMGIPHRVVISPRGNEAGTLEYKGRRDDEKQDVQIDEVLPLLAE 570


>gi|299143351|ref|ZP_07036431.1| proline--tRNA ligase [Peptoniphilus sp. oral taxon 386 str. F0131]
 gi|298517836|gb|EFI41575.1| proline--tRNA ligase [Peptoniphilus sp. oral taxon 386 str. F0131]
          Length = 584

 Score =  148 bits (372), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 47/221 (21%), Positives = 92/221 (41%), Gaps = 11/221 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++E   H+ L R      I +  SG+  +   G+K+ + +   +R +
Sbjct: 4   SKLYMPTLREVPADAEIASHQLLLRGA---FIRKSASGIYTYLPLGYKVIKKVEKIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +EI    +  + +W+ S  WD +   MF ++  +D     R F L P       
Sbjct: 61  MDRAGSQEILMSAIQPKEIWEASDRWDRFGPEMFKLRDRND-----REFCLGPTAEEYFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNEC 404
            +    +KSY++LP+ L +  + YR+E      G+ R R F+  DA+ F  T E M    
Sbjct: 116 TLIKDEVKSYKQLPLNLYQIQTKYRDEKRPRF-GINRAREFSMKDAYSFDTTPETMQVSY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
           ++++     I+   G +  +V+          S      +E
Sbjct: 175 MEMYRAYEKIFDRLGLDYKIVEGDNGAMGGKKSHEFIALSE 215



 Score = 79.4 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 38/163 (23%), Positives = 65/163 (39%), Gaps = 9/163 (5%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I Q+        NA Y++ + ++    M    V G       I+ +N+  N  
Sbjct: 404 RGIEVGNIFQLGTKYSEALNATYLDENGKEQLIWMGSYGV-GVTRTVTAIVEQNYDENGI 462

Query: 548 LWL---SPIQAIVTTITSS---AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W    +P   IVT +       +E  ++I N L      +  D RNE    K ++  + 
Sbjct: 463 IWPMSVAPYHVIVTVVNPKDEIQLELGEKIYNSLVELGHEVLLDDRNERAGVKFKDRDLI 522

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            IPI I  G + A E  +       T   ++   +AI  ++ E
Sbjct: 523 GIPIRITVGKRAAEE-IVEYSLRRETEKTEIFAKEAIEKVSGE 564


>gi|262197045|ref|YP_003268254.1| prolyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
 gi|262080392|gb|ACY16361.1| prolyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
          Length = 584

 Score =  148 bits (372), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 50/233 (21%), Positives = 88/233 (37%), Gaps = 16/233 (6%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
            H  + R   +  +A    GV  +   GW++ + + + +R ++     +E+  P  +   
Sbjct: 22  SHVYMVRGGYMRRLAA---GVYTFLPLGWRVIRKIENIVREEMDAAGAQEVLMPAAIPGE 78

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LWQ+SG W  Y   +   +      +    F   P +    V +     KSYRELP+ L 
Sbjct: 79  LWQESGRWSKYGPELLRFQD-----RKGADFCFGPTHEEVVVDMVRRDTKSYRELPLTLY 133

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFEK 422
           +  S +R+E      GLMR R F   DA+ F   E+        ++     I++  G + 
Sbjct: 134 QIQSKFRDELRPR-AGLMRGREFIMKDAYSFDVSEEAAMHSYTGMYQAYERIFRRCGLDF 192

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIM-----KGVLDTIKNSSQDRINTGVLLG 470
             V+  T       S      AE+           +   N  + ++      G
Sbjct: 193 RPVEADTGAIGGSRSHEFQVLAESGEDAIVSCDACEYAANVEEAKVPAPSEPG 245



 Score = 83.7 bits (205), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 22/135 (16%), Positives = 48/135 (35%), Gaps = 8/135 (5%)

Query: 516 EKCHPVMIHRAVFGS-IERFIGIMIENFKGN----LPLWLSPIQAIVTTITSSAVEYA-- 568
           E      +    +G  I R     IE          PL ++P +  +  +     + A  
Sbjct: 435 EAGQETAMEMGCYGIGITRIAAAAIEQNHDEGGIVWPLSIAPYEVAILPLQMKDEDVAAA 494

Query: 569 -QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGST 627
            + +   LK   + +  D R E    K ++  +  IP+ +  G +   +  + ++     
Sbjct: 495 GETLYAKLKECGIEVLLDDRAERPGAKFKDADLIGIPLRVAIGKRSLDDGKVEVKWRKGG 554

Query: 628 TTQKVSLLDAIPILT 642
             + V + DA+  + 
Sbjct: 555 DAELVPVADAVEHVA 569


>gi|218248302|ref|YP_002373673.1| prolyl-tRNA synthetase [Cyanothece sp. PCC 8801]
 gi|226699137|sp|B7K1H5|SYP_CYAP8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|218168780|gb|ACK67517.1| prolyl-tRNA synthetase [Cyanothece sp. PCC 8801]
          Length = 598

 Score =  147 bits (371), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 59/253 (23%), Positives = 94/253 (37%), Gaps = 8/253 (3%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q           E+E   H+ L R   +  I   GSG+  +    W++ Q +   +R +
Sbjct: 4   SQMLFVTLREDPAEAEIPSHKLLLRAGYIRRI---GSGIYAYLPLMWRVLQKVSQIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E   PQ+    LW++SG W++Y      +    D  +      L P +     
Sbjct: 61  MNAAGAQECLLPQLQPAELWRESGRWETYTKAEGIMFSLID--RRDTELGLGPTHEEVIT 118

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    ++SYR+LPV L +  S +R+E      GLMR R F   DA+ F   E    E  
Sbjct: 119 TIAKEMIRSYRQLPVNLYQIQSKFRDEIRPRF-GLMRGREFIMKDAYSFHASEDSLKETY 177

Query: 406 KIH-NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
           +       ++    G E   V+  +       S      AE     VL T        + 
Sbjct: 178 QAMDQAYRNMITRCGLEFRAVQADSGAIGGSASQEFMILAEAGEDEVLYTEDGKYAANVE 237

Query: 465 TGVLLGEGAFYGP 477
             V L   A   P
Sbjct: 238 KAVSLPPDAELSP 250



 Score = 88.3 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 27/162 (16%), Positives = 62/162 (38%), Gaps = 9/162 (5%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I Q+         A + N   E+  P+++     G        + +++  +  
Sbjct: 435 RGIEVGHIFQLGVKYSQAMGATFTNEQGEEK-PLIMGCYGVGVSRLAQAAVEQSYDKDGI 493

Query: 548 LWL---SPIQ-AIVTTITSS--AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W    +P    +V    +    VE A+++   L    +    D R+E    K ++  + 
Sbjct: 494 IWPVAIAPYHAVVVIPNINDAQQVEVAEKLYTELNKVGVETLLDDRDERAGVKFKDAELI 553

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            IP  I+ G +      + +    +  +Q++++   +  L K
Sbjct: 554 GIPYRIVTG-RSLQSGKVELVERSTKNSQEIAIDQVVETLKK 594


>gi|220961890|gb|ACL93382.1| threonyl-tRNA synthetase [Streptococcus thermophilus]
 gi|220961894|gb|ACL93384.1| threonyl-tRNA synthetase [Streptococcus thermophilus]
 gi|220961896|gb|ACL93385.1| threonyl-tRNA synthetase [Streptococcus thermophilus]
          Length = 165

 Score =  147 bits (371), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 73/167 (43%), Positives = 121/167 (72%), Gaps = 5/167 (2%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQIEKKMQE 128
           L ++RHS AH+ A+A + ++P++ + +GP IEDGFYYD D +    S+++L +IE++M++
Sbjct: 1   LPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNQAGQISNEDLPRIEEEMKK 60

Query: 129 IIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKE-NVTLYRQGEWFDLCRGPH 187
           I+  + P +++ ++ ++ARE+F+   + YK+E++E     +  +T+YRQGE+ DLCRGPH
Sbjct: 61  IVKENFPSIREEVTKDEAREIFK--NDPYKLELIEEHSEDDGGLTIYRQGEYVDLCRGPH 118

Query: 188 VRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
           V STG+++ F  L  VAGAYWRG+S+  M+ RIYGTAW  +++L  Y
Sbjct: 119 VPSTGRIQIFHLL-NVAGAYWRGNSDNAMMQRIYGTAWFDKKDLKAY 164


>gi|270264794|ref|ZP_06193058.1| prolyl-tRNA synthetase [Serratia odorifera 4Rx13]
 gi|270041092|gb|EFA14192.1| prolyl-tRNA synthetase [Serratia odorifera 4Rx13]
          Length = 572

 Score =  147 bits (371), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 47/249 (18%), Positives = 97/249 (38%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGLRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ + +  E+  P V    LWQ+SG W+ Y   +       +     R F L P +    
Sbjct: 60  EMNNANAIEVCMPVVQPADLWQESGRWEQYGPELLRFVDRGE-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + + SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++     
Sbjct: 115 TDLIRNEISSYKQLPLNFFQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHTSQESLQAT 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   G +   V   T       S      A++    ++ +  +     I
Sbjct: 174 YDAMYEAYSKIFSRMGLDFRPVHADTGSIGGSASHEFQVLADSGEDDIVFSTGSDFAANI 233

Query: 464 NTGVLLGEG 472
                +   
Sbjct: 234 ELAEAVAPA 242



 Score = 81.8 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 55/165 (33%), Gaps = 13/165 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           I R  + G I Q+         A             ++    +G  + R +   IE    
Sbjct: 405 IKRGIEVGHIFQLGTKYSEAMKATVQGEDG---RNQVLTMGCYGIGVTRVVAAAIEQNHD 461

Query: 545 N----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +     P  ++P Q  +  +           A+E+ N L+SH + +  D R E       
Sbjct: 462 DRGIIWPDAIAPFQVAILPMNMHKSFRVQALAEELYNTLRSHGIDVILDDRKERPGVMFA 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           +  +  +P  I+ GD+      I  +       Q +   + +  L
Sbjct: 522 DMELIGVPHSIVIGDRNLDSEEIEYKNRRVGEKQMIKTGEIVDFL 566


>gi|51102320|gb|AAT95873.1| prolyl-tRNA synthetase [Entamoeba terrapinae]
          Length = 410

 Score =  147 bits (371), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 68/398 (17%), Positives = 141/398 (35%), Gaps = 55/398 (13%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEI--NTPQVLDQHLWQQSGHWDSYRAN 317
            D SG        + I++ +  ++ ++IK    E       V    L ++    + +   
Sbjct: 13  YDISGCYILRPAAYGIWENIQQFIDKRIKRMGVENTYFPCFVSQAALKKEEDELNGFTPE 72

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           +  V  +  +       AL+P +       F + +  +R+LP+++ ++ +V R E S   
Sbjct: 73  VAWVTKSGSSDLQ-EPIALRPTSETVMYPAFKNWITGHRDLPLKVNQWCNVVRWEFSHP- 130

Query: 378 HGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
           +  +R R F   + H  +  +     EC +I  L  S+Y+D     ++    ++ E    
Sbjct: 131 YPFIRTREFLWQEGHTAYANQPDCEKECRQIMELYASVYEDLLAVPVIRGKKSKGETF-- 188

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
                                              GA+Y    E I+    GR  Q  T 
Sbjct: 189 ----------------------------------PGAYYSLTVECIIPT-NGRSVQAATS 213

Query: 497 QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI--- 553
                  S+         ++K    ++++  +G   R IG+ +     +  + + P    
Sbjct: 214 HHLGQTFSKLFGIEFEDINKKKQ--LVYQNSWGLSTRSIGVTVMTHGDDKGIVIPPRAAN 271

Query: 554 -QAIVTTI------TSSAVEYAQEIANLLKSHHLSIETDFRN-ETINYKIREHSIKKIPI 605
            Q ++ TI             A E+  +L  + +    D  +     +K  E+ ++ IPI
Sbjct: 272 KQVVIITIHHKGSPNDEMDAKANELTEMLLDNDIRAFADTNDMHNPGWKFSEYEMRGIPI 331

Query: 606 IIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            I  G ++ +   + I R  +    + S  D +  + K
Sbjct: 332 RIELGQRDYAGSKVVIVRRDNGAKCESSWTDLVATVRK 369


>gi|257060371|ref|YP_003138259.1| prolyl-tRNA synthetase [Cyanothece sp. PCC 8802]
 gi|256590537|gb|ACV01424.1| prolyl-tRNA synthetase [Cyanothece sp. PCC 8802]
          Length = 598

 Score =  147 bits (371), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 59/253 (23%), Positives = 94/253 (37%), Gaps = 8/253 (3%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q           E+E   H+ L R   +  I   GSG+  +    W++ Q +   +R +
Sbjct: 4   SQMLFVTLREDPAEAEIPSHKLLLRAGYIRRI---GSGIYAYLPLMWRVLQKVSQIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E   PQ+    LW++SG W++Y      +    D  +      L P +     
Sbjct: 61  MNAAGAQECLLPQLQPAELWRESGRWETYTKAEGIMFSLID--RRDTELGLGPTHEEVIT 118

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    ++SYR+LPV L +  S +R+E      GLMR R F   DA+ F   E    E  
Sbjct: 119 TIAKEMIRSYRQLPVNLYQIQSKFRDEIRPRF-GLMRGREFIMKDAYSFHASEDSLKETY 177

Query: 406 KIH-NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
           +       ++    G E   V+  +       S      AE     VL T        + 
Sbjct: 178 QAMDQAYRNMITRCGLEFRAVQADSGAIGGSASQEFMILAEAGEDEVLYTEDGKYAANVE 237

Query: 465 TGVLLGEGAFYGP 477
             V L   A   P
Sbjct: 238 KAVSLPPDAELSP 250



 Score = 88.3 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 27/162 (16%), Positives = 62/162 (38%), Gaps = 9/162 (5%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I Q+         A + N   E+  P+++     G        + +++  +  
Sbjct: 435 RGIEVGHIFQLGVKYSQAMGATFTNEQGEEK-PLIMGCYGVGVSRLAQAAVEQSYDKDGI 493

Query: 548 LWL---SPIQ-AIVTTITSS--AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W    +P    +V    +    VE A+++   L    +    D R+E    K ++  + 
Sbjct: 494 IWPVAIAPYHAVVVIPNINDAQQVEVAEKLYTELNKVGVETLLDDRDERAGVKFKDAELI 553

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            IP  I+ G +      + +    +  +Q++++   +  L K
Sbjct: 554 GIPYRIVTG-RSLQSGKVELVERSTKNSQEIAIDQVVETLKK 594


>gi|167630335|ref|YP_001680834.1| prolyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
 gi|226701294|sp|B0THP0|SYP_HELMI RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|167593075|gb|ABZ84823.1| prolyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
          Length = 575

 Score =  147 bits (371), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 56/239 (23%), Positives = 96/239 (40%), Gaps = 17/239 (7%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E   H+ L R      I    +GV  +   G ++ Q +++ +R ++     +E+  P 
Sbjct: 17  EAEVISHQLLLRAG---FIRRSSAGVYHYLPLGQRVLQRIMAIVREEMNAAGGQELLMPI 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    +W QSG W  Y   +F +K      +  R F L P +      +  + + SYR+L
Sbjct: 74  IQPAEIWLQSGRWHVYGDELFRLKD-----RHQRDFCLSPTHEESITDLVKNNVSSYRDL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKD 417
           P+ L    + YR+E      GLMR R F   D + F   E   +E   K++   ++I++ 
Sbjct: 129 PMLLYHITNKYRDERRPRF-GLMRGREFIMKDLYSFDRDEAGLHESYMKMYQAYVNIFRR 187

Query: 418 FGFEKIMVKLSTRPEKRV-GSDALWDDAEN-----IMKGVLDTIKNSSQDRINTGVLLG 470
            G     V+          GS      AE+     +     D   N+ +      V  G
Sbjct: 188 CGLTFRPVEADPGAIGGTGGSHEFMVLAESGEAEIVYCDACDYAANTEKAECKPQVTPG 246



 Score = 86.8 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 58/146 (39%), Gaps = 14/146 (9%)

Query: 516 EKCHPVMIHRAVFGS-IERFIGIMIENFKGN----LPLWLSPIQAIVTTITSS---AVEY 567
           EK    ++    +G  + R +   IE    +     P+ ++P Q +V  +++     +E 
Sbjct: 428 EKGQENLMVMGCYGVGVSRTMAAAIEQNHDDNGIVWPMAIAPFQVLVVPVSNKDAAQMEA 487

Query: 568 AQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGST 627
           A+ I   L +  +    D R E    K ++  +  IP+ I  G+K AS+  + ++     
Sbjct: 488 AEAIYKELIAKGVDTLLDDRPERAGVKFKDADLIGIPVRITVGNKLASDGVVEVKLRRGG 547

Query: 628 TTQKVSLLDAIPILTK------ESLP 647
                S  D +  +        E+ P
Sbjct: 548 EQFTASREDVVAQVQALIREQMEATP 573


>gi|145251301|ref|XP_001397164.1| prolyl-tRNA synthetase YHR020W [Aspergillus niger CBS 513.88]
 gi|134082695|emb|CAK42588.1| unnamed protein product [Aspergillus niger]
          Length = 604

 Score =  147 bits (371), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 81/421 (19%), Positives = 147/421 (34%), Gaps = 70/421 (16%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRAN 317
            D SG        + I++ +  +    IK    +  + P  + + + Q +  H + + A 
Sbjct: 115 YDVSGCFILKPASYFIWEEIQQWFNSYIKKMGVKNCSFPLFVSEDVLQREKDHIEGFAAE 174

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           +  V  A  T  + +  A++P +       +   ++S+R+LP++L ++ SV R E     
Sbjct: 175 VAWVTHAGSTPLEKK-IAIRPTSETVMYPYYAKWIRSHRDLPLKLNQWNSVVRWEFKHP- 232

Query: 378 HGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
              +R R F   + H    TKE    E + I +L   IY++     ++    T  EK  G
Sbjct: 233 QPFLRTREFLWQEGHTAHLTKEGAHEEVMTILDLYARIYEELLAVPVVKGQKTEKEKFAG 292

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
                                                 Y    E  +  A GR  Q GT 
Sbjct: 293 G------------------------------------LYTTTVEGYIP-ATGRGIQGGTS 315

Query: 497 Q-VDFNLPSRFNAFYVN-----SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL 550
             +  N    F     +        EK  P+ + +  +G   R +G+M+     N  L L
Sbjct: 316 HGLGQNFSKMFGITVEDPTAKSDDKEKAAPLHVWQNSWGLSTRTLGVMVMIHSDNRGLVL 375

Query: 551 SP----IQAIVTTIT----------SSAVEYAQEIANLLKSHHLSIETDFR-NETINYKI 595
            P     Q I+  +               +    + + L+   +  E+D R   +  +K 
Sbjct: 376 PPRVADTQTIIVPVGITAKTTDEERKKLYDEVDRLVSTLREAGVRAESDLREGYSPGWKF 435

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRF------GSTTTQKVSLLDAIPILTKESLPPD 649
            E  ++ +P+ +  G  E +   +   R       G    Q   L  A+P L  E++  D
Sbjct: 436 NEWELRGVPLRLEFGPGELAGGFVTAARRDVPGKDGKAPIQISELTTAVPALL-ETIQKD 494

Query: 650 C 650
            
Sbjct: 495 L 495


>gi|138894777|ref|YP_001125230.1| prolyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
 gi|166980126|sp|A4IMD1|SYP_GEOTN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|134266290|gb|ABO66485.1| Prolyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
          Length = 567

 Score =  147 bits (371), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 60/313 (19%), Positives = 111/313 (35%), Gaps = 38/313 (12%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E + H+ L R      + +  SGV  +   G ++ Q + + +R ++      E+  P 
Sbjct: 17  DAEVKSHQLLLRAG---FVRQSASGVYTFLPLGQRVLQKVEAIIREEMNRAGALELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQQSG W SY   +  +K      +  R F L P +      +    +K+Y+ L
Sbjct: 74  LQPAELWQQSGRWYSYGPELMRLKD-----RHERDFVLGPTHEEMITTIVRDEVKTYKRL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKD 417
           P+ L +  + +R+E      GL+R R F   DA+ F T  E +     K++    +I++ 
Sbjct: 129 PLILYQIQTKFRDEKRPRF-GLLRGREFIMKDAYSFHTSQESLDETYNKMYEAYANIFRR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
            G     V   +       +             VL  I   +       +   + + Y  
Sbjct: 188 CGLNFRAVIADSGAMGGKDTHEF---------MVLSDIGEDT-------IAYSDASDYAA 231

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
             E               +                +  E+     +   +  + ER I  
Sbjct: 232 NIEM-----------APVVTTYEKSSEPLVELKKVATPEQKTIAEVASYLQVAPERCIKS 280

Query: 538 MIENFKGNLPLWL 550
           ++ N  G   L L
Sbjct: 281 LLFNVDGRYVLVL 293



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 61/163 (37%), Gaps = 11/163 (6%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G +  +        NA Y++ +      +M    +   + R +  + E F     
Sbjct: 404 RGIEVGHVFKLGTKYSEAMNAVYLDENGRTQTMIMGCYGI--GVSRLVAAIAEQFADENG 461

Query: 546 --LPLWLSPIQAIVTTITSSAVEY---AQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              P+ ++P    + T  + + E    A+E    L      +  D R E    K  +  +
Sbjct: 462 LVWPVSVAPFHVHLLTANAKSDEQRMLAEEWYEKLGQAGFDVLYDDRPERAGVKFADSDL 521

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             IP+ +  G + ASE  + ++   +  T  V + + I  + +
Sbjct: 522 IGIPLRVTVGKR-ASEGVVEVKVRKTGETFDVPVGELIETVRR 563


>gi|50122450|ref|YP_051617.1| prolyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
 gi|81827028|sp|Q6D1B9|SYP_ERWCT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|49612976|emb|CAG76427.1| prolyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
          Length = 572

 Score =  147 bits (371), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 44/218 (20%), Positives = 89/218 (40%), Gaps = 12/218 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYMLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGLRVLRKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E++ P V    LW +SG WD Y   +       +     R F L P +    
Sbjct: 60  EMNNAGAIEVSMPVVQPADLWVESGRWDQYGPELLRFVDRGE-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + + SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++     
Sbjct: 115 TDLIRNEVSSYKQLPLNFFQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHTSQESLQAT 173

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWD 442
                +  +  K F    +  +        +G +A  +
Sbjct: 174 YDT--MYAAYSKIFSRMDLDFRAVQADTGSIGGNASHE 209



 Score = 82.9 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 50/164 (30%), Gaps = 11/164 (6%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           I R  + G I Q+         A             M    +   + R +   IE     
Sbjct: 405 IKRGIEVGHIFQLGSKYSEALKATVQGEDGRNQTLTMGCYGI--GVTRVVAAAIEQNNDE 462

Query: 546 ----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
                P  ++P    +  +         E A++I   L++  + +  D R E       +
Sbjct: 463 RGIIWPDAIAPFHVAILPMNMHKSFRVKEVAEDIYQQLRAKGIEVLLDDRKERPGVMFAD 522

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
             +  +P  I+ GD+      I  +       Q +   + I  L
Sbjct: 523 MELIGVPHTIVIGDRNLDSEEIEYKNRRVGEKQMIKTSEIIDFL 566


>gi|37524693|ref|NP_928037.1| prolyl-tRNA synthetase [Photorhabdus luminescens subsp. laumondii
           TTO1]
 gi|81834075|sp|Q7N8M7|SYP_PHOLL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|36784118|emb|CAE12987.1| prolyl-tRNA synthetase [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 572

 Score =  147 bits (371), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 53/264 (20%), Positives = 101/264 (38%), Gaps = 12/264 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + +   +R 
Sbjct: 3   TSQYLLSTLKETPADAEVVSHKLMLRAGMIRKLA---SGLYNWMPTGIRVLKKVEKIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    EI+ P V    LWQ+SG W+ Y   +       D     R F L P +    
Sbjct: 60  EMNNTGAIEISMPVVQPADLWQESGRWEQYGPELLRFVDRGD-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + + SY++LP+ L +  + +R+E      G+MR R F   DA+ F   +    E 
Sbjct: 115 TDLIRNEVSSYKQLPLTLFQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHATQTSLQET 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   G +   V   T       S      A +    ++ + +++    I
Sbjct: 174 YDNMYEAYSKIFTRIGLDFRAVLADTGSIGGSASHEFQVLAASGEDDIVFSTESNYAANI 233

Query: 464 NTGVLLGEGAFYG-PKFEYILKDA 486
                +        P  +  L D 
Sbjct: 234 ELAEAVAPAHDRAVPTEDMHLVDT 257



 Score = 88.7 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 59/168 (35%), Gaps = 13/168 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           I R  + G I Q+         A          H  ++    +G  + R +   IE    
Sbjct: 405 IKRGIEVGHIFQLGTKYSDAMKATVQGEDG---HNQIVTMGCYGIGVTRIVAAAIEQNHD 461

Query: 545 N----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +     P  ++P Q  +  +         E A+++   L++  + +  D R E       
Sbjct: 462 DRGIIWPDAIAPFQVAILPMNMHKSYRVKEVAEKLYADLRASGIDVIFDDRKERPGVMFA 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  +  +P  ++ GD+      +  +   +   Q + L + +  L ++
Sbjct: 522 DMELIGVPHTVVIGDRNLDNGEVEYKHRRNDEKQMLKLDNVVDYLKQQ 569


>gi|300724773|ref|YP_003714098.1| proline tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
 gi|297631315|emb|CBJ92010.1| proline tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
          Length = 573

 Score =  147 bits (371), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 65/330 (19%), Positives = 124/330 (37%), Gaps = 17/330 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTLKETPADAEVVSHKLMLRAGMIRKLA---SGLYNWMPTGVRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E++ P V    LW +SG W+ Y   +       +     R F L P +    
Sbjct: 60  EMNNAGAIEVSMPVVQPADLWLESGRWEQYGPELLRFVDRGE-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + + SY++LP+ L +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLVRNEVTSYKQLPLNLFQIQTKFRDEVRPRF-GVMRSREFIMKDAYSFHTSQESLQET 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             K++     I+   G +   V   T       S      AE+    ++ + +++    I
Sbjct: 174 YDKMYAAYSKIFTRIGLDFRPVLADTGSIGGSASHEFQVLAESGEDDIVFSTESNYAANI 233

Query: 464 NTGVLLGEGAFYG-PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
                +        P  E  L D          ++       +     +   +E+    +
Sbjct: 234 ELAEAVMPSQERTAPSEEMRLVDTPHAKTIAELVEQFNLPIEKTVKTLMVHAAEESEHKL 293

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
           I   V G  E     + E     LPL  SP
Sbjct: 294 IALLVRGDHE-----LNEIKAEKLPLVASP 318



 Score = 85.2 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 26/164 (15%), Positives = 53/164 (32%), Gaps = 9/164 (5%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           I R  + G I Q+         A   N        V +     G        + ++    
Sbjct: 405 IKRGIEVGHIFQLGTKYSDALKATVQNEDGHNQV-VTMGCYGIGVTRIVAAAIEQSHDDR 463

Query: 546 LPLW---LSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
             +W   ++P Q  +  +         E A+++   L++  + +  D R E       + 
Sbjct: 464 GIIWSDAIAPFQVAILPMNMHKSYRVKEVAEKLYADLRASGIDVIFDDRKERPGVMFADM 523

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +  +P  ++ GD+      I  +   +   Q + L   I  L 
Sbjct: 524 ELIGVPHTLVIGDRNLDNGEIEYKCRRTGDKQMLKLESIIEYLK 567


>gi|313201958|ref|YP_004040616.1| prolyl-tRNA synthetase [Methylovorus sp. MP688]
 gi|312441274|gb|ADQ85380.1| prolyl-tRNA synthetase [Methylovorus sp. MP688]
          Length = 574

 Score =  147 bits (371), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 51/235 (21%), Positives = 96/235 (40%), Gaps = 12/235 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  +       +E+E   HR + R   +  +   GSG+  W   G ++ + + + +R 
Sbjct: 3   ASQFFIATQKEAPQEAELPSHRLMLRAGLIKRL---GSGLYTWMPLGLRVLRKVETVVRD 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LWQ++G WD +   M  +     T +  R+F   P +    
Sbjct: 60  EMNKAGALELLMPAVQPAELWQETGRWDVFGPQMLKI-----TDRHERSFCFGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
             +    +KSY++LP+   +  + +R+E      G+MR R F   DA+ F T  E +   
Sbjct: 115 TDLARREIKSYKQLPLNFYQIQTKFRDEIRPRF-GVMRAREFVMKDAYSFHTSLESLEAT 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNS 458
              ++    +++   G +   V+  T      GS      A +  +  L     S
Sbjct: 174 YATMYQAYSNVFNRLGLKFRAVRADTGAIGGDGSHEFHVLA-DSGEDALAYCPAS 227



 Score = 87.1 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 58/165 (35%), Gaps = 13/165 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN- 545
           R  + G I Q+        NA Y   + E     ++    +G  + R +G  IE      
Sbjct: 410 RGIEVGHIFQLRTKYAEAMNATYQAENGELK---IMEMGCYGIGVSRIVGAAIEQGNDAR 466

Query: 546 ---LPLWLSPIQAIVTTITSSAVEYAQE----IANLLKSHHLSIETDFRNETINYKIREH 598
               P  ++P    +  I     +  ++    +   L+   + +  D R E       + 
Sbjct: 467 GIIFPAAMAPFSVAIAPIGMDRSDAVKDATLALYAELQQAGIDVLLDDRGERPGVMFADL 526

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +  IP  ++ GD+   E  +  +       Q V+L + +  L +
Sbjct: 527 ELIGIPHRVVIGDRGLKEGQVEYQARTDEQAQSVALSEIVSKLKQ 571


>gi|78357249|ref|YP_388698.1| prolyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|114152190|sp|Q30Z93|SYP_DESDG RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|78219654|gb|ABB39003.1| prolyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 574

 Score =  147 bits (371), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 47/222 (21%), Positives = 90/222 (40%), Gaps = 11/222 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +   +        ++E   H+ L R   +  +    SG+  +   G +  +   S +R+
Sbjct: 3   WSNFYIPTLKEAPADAEVVSHKLLIRAGMIRKL---TSGIYIYLPLGLRSIEKAASIVRQ 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +E+  P V    LWQ+SG WD Y   +  +     + +  R + L P +    
Sbjct: 60  EMNSAGAQELLMPMVQPADLWQESGRWDFYGKELLRI-----SDRHGRDYCLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    ++SYR+LP+ L +  + +R+E      GLMR R F   DA+ F    Q  +  
Sbjct: 115 TDLVRGEVRSYRQLPLNLYQIQTKFRDEIRPRF-GLMRGREFMMKDAYSFDRDAQGLDLS 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
            + ++   + I+   G +   V+  +       S      AE
Sbjct: 174 YRAMYEAYMKIFSRMGLKFRAVEADSGSIGGSFSHEFMVLAE 215



 Score = 77.9 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 17/163 (10%), Positives = 56/163 (34%), Gaps = 12/163 (7%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN- 545
           R  + G +  +           +++ + ++    ++    +G  + R +   IE      
Sbjct: 403 RGIEVGHVFKLGTKYSEAMGCKFLDENGKEQ---VMLMGCYGIGVSRVVAACIEQNSDEN 459

Query: 546 ---LPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
               P  ++P + ++  +            E+   +++    +  D RNE    K ++  
Sbjct: 460 GIVFPPPIAPFEVLLLNLDGKNDDVNARVDELYGAVQAAGCDVLMDDRNERPGVKFKDAD 519

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +  +P+ ++ G K  +   +  +   +    ++ +        
Sbjct: 520 LIGVPMQLVVGGKGLARGIVEAKDRRTGEKTELPVDGFAQAFA 562


>gi|269119306|ref|YP_003307483.1| prolyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
 gi|268613184|gb|ACZ07552.1| prolyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
          Length = 571

 Score =  147 bits (371), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 52/228 (22%), Positives = 100/228 (43%), Gaps = 11/228 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +  Y    +E+E   H+ + R   +  +A   SGV  +   G ++ + + + +R +
Sbjct: 4   SKAFVKTYKEAPKEAEVISHKLMLRASMIKRLA---SGVYSYLPLGNRVLKKVENIVREE 60

Query: 287 IK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E+  P +    LW++SG W +Y   +  +K      +  R FAL P +     
Sbjct: 61  MDKSGAQEVFMPVLQPADLWKESGRWIAYGPELMRMKD-----RHEREFALGPTHEEVVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +  + + SY++LP+ L +  + +R+E      GLMR R F   DA+ F T  E +  E 
Sbjct: 116 DIVRNEINSYKDLPMNLYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSFHTTHESLDEEY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
           L +     +I+   G +   V+  +       +      AE+    VL
Sbjct: 175 LNMKTTYENIFTRCGLDFRAVEADSGSIGGDVTHEFMVLAESGEDDVL 222



 Score = 70.6 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 30/161 (18%), Positives = 61/161 (37%), Gaps = 7/161 (4%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPL 548
           R  + G I       S      V   + K   + +     G        + +N+  N  +
Sbjct: 408 RGIEVGHIFELGTKYSEAMKANVLDENGKQATLKMGCYGIGVSRIMSAAIEQNYDENGII 467

Query: 549 WLS-----PIQAIVTTITS-SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
           W        +  I+  I     V  A+++  LLK H++ +  D R+E   +K ++  +  
Sbjct: 468 WPVNIAPYEVDVIIPNIKDKDQVRVAEDVYQLLKDHNIDVILDDRDERAGFKFKDADLIG 527

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            P+ II G K  +E  + ++   +  T+ V +   +  +  
Sbjct: 528 FPMKIITG-KSIAEGKVEVKDRKTGNTEIVEIGTLLDYVKN 567


>gi|161621298|ref|YP_585241.2| prolyl-tRNA synthetase [Cupriavidus metallidurans CH34]
 gi|114152237|sp|Q1LIQ4|SYP_RALME RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
          Length = 573

 Score =  147 bits (371), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 45/221 (20%), Positives = 95/221 (42%), Gaps = 11/221 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       ++E   H+ + R   +  +   G+G+  +   G ++ + + + +R 
Sbjct: 3   ASQFFISTLKEAPADAEIVSHKLMMRAGMIKKL---GAGIYNYMPVGLRVIRKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E++ P +    LWQ++G WD     +  +K      +  R FA++P +    
Sbjct: 60  EMNRAGAVELSMPVIQPAELWQETGRWDKMGPELLRLKD-----RHERDFAVQPTSEEVV 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
             +    ++SY++LPV   +  + +R+E      G+MR R FT  DA+ F    + +   
Sbjct: 115 TDIARTEIRSYKQLPVNFYQIQTKFRDERRPRF-GIMRGREFTMKDAYSFDRDIDGLKAS 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
              +++  + I++ FG E   V          GS      A
Sbjct: 174 YQNMYDAYVRIFQRFGLEFRAVAADNGAIGGSGSHEFHVIA 214



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 53/151 (35%), Gaps = 12/151 (7%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G +  +        NA +++ +  K  P+ +     G   R +G  IE       
Sbjct: 408 RGIEVGHVFMLGTRYSESMNATFLDENG-KTQPMQMGCYGIGVT-RILGAAIEQNYDERG 465

Query: 546 --LPLWLSPIQAIVTTITSSAVEY----AQEIANLLKSHHLSIETDFRNETINYKIREHS 599
              P  ++P   +V  +     E     A  I   L +  + +  D R E       +  
Sbjct: 466 IIWPAAIAPFAVVVCPVGYDRNEAVKAEADRIHAELLAAGVDVILDDRGERPGVMFADWE 525

Query: 600 IKKIPIIIICGDKEASERSIGIR-RFGSTTT 629
           +  +P  ++ GD+   E  +  + R  +  T
Sbjct: 526 LIGVPHRVVVGDRGLKEGKVEYQGRRDAQAT 556


>gi|161344091|ref|YP_400976.2| prolyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
 gi|114152269|sp|Q31LT0|SYP_SYNE7 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
          Length = 600

 Score =  147 bits (371), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 68/305 (22%), Positives = 115/305 (37%), Gaps = 15/305 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q           E+E   H+ L R   +  IA   SG+  +    W++ + +   +R +
Sbjct: 4   SQMLFVTLREDPAEAEIPSHKLLLRAGYIRRIA---SGIYAYLPLMWRVLRKVSQIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E   PQ+    LWQ+SG W++Y      +   DD  +  R   L P +     
Sbjct: 61  MDATGAQETLLPQLQPAELWQESGRWETYTKAEGIMFSLDD--RQQRQLGLGPTHEEVIT 118

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           AV    ++SYR+LP  L +  + +R+E      GLMR R F   DA+ F   E+   +  
Sbjct: 119 AVARDLIRSYRQLPQNLYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSFHADEESLRQTY 177

Query: 406 KIH-NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
                   +I++  G +   V+  +       S      A+     +L T        + 
Sbjct: 178 AAMDQAYRNIFRRCGLQFRAVEADSGAIGGSASQEFMILADAGEDEILYTEDGRYAANVE 237

Query: 465 TGV-LLGEG---AFYG-PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
             V L  E    AF    K E    D I     C  ++ D     +   +     + K  
Sbjct: 238 KAVSLPAEAIASAFTTFEKRETPGTDTI--ASLCEFLKADPTQVVKQVLYQAVFDNGKLL 295

Query: 520 PVMIH 524
           P++I 
Sbjct: 296 PILIS 300



 Score = 82.1 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 27/165 (16%), Positives = 62/165 (37%), Gaps = 9/165 (5%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           A  R  + G I Q+         A +   +  +  P+ +     G        + +++  
Sbjct: 431 ASARGIEAGHIFQLGLKYSQAMGATFTTENGTEE-PLWMGCYGIGVSRVAQAAVEQSYDK 489

Query: 545 NLPLWL---SPIQAIVTT---ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           +  +W    +P QA+V       +  V  A++I   L +  +    D R+E    K ++ 
Sbjct: 490 DGIIWPVAIAPYQAVVVIPNITDTEQVAAAEKIYADLTAAGIETLLDDRDERAGVKFKDA 549

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +  IP  I+ G +   E  + + +  S  +  +++   +  +  
Sbjct: 550 DLIGIPYRIVTG-RSLKEGKVEVVQRASKESSVIAVGSVVETVQD 593


>gi|81169649|gb|ABB57989.1| prolyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
          Length = 606

 Score =  147 bits (371), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 68/305 (22%), Positives = 115/305 (37%), Gaps = 15/305 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q           E+E   H+ L R   +  IA   SG+  +    W++ + +   +R +
Sbjct: 10  SQMLFVTLREDPAEAEIPSHKLLLRAGYIRRIA---SGIYAYLPLMWRVLRKVSQIVREE 66

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E   PQ+    LWQ+SG W++Y      +   DD  +  R   L P +     
Sbjct: 67  MDATGAQETLLPQLQPAELWQESGRWETYTKAEGIMFSLDD--RQQRQLGLGPTHEEVIT 124

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           AV    ++SYR+LP  L +  + +R+E      GLMR R F   DA+ F   E+   +  
Sbjct: 125 AVARDLIRSYRQLPQNLYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSFHADEESLRQTY 183

Query: 406 KIH-NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
                   +I++  G +   V+  +       S      A+     +L T        + 
Sbjct: 184 AAMDQAYRNIFRRCGLQFRAVEADSGAIGGSASQEFMILADAGEDEILYTEDGRYAANVE 243

Query: 465 TGV-LLGEG---AFYG-PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
             V L  E    AF    K E    D I     C  ++ D     +   +     + K  
Sbjct: 244 KAVSLPAEAIASAFTTFEKRETPGTDTI--ASLCEFLKADPTQVVKQVLYQAVFDNGKLL 301

Query: 520 PVMIH 524
           P++I 
Sbjct: 302 PILIS 306



 Score = 82.1 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 27/165 (16%), Positives = 62/165 (37%), Gaps = 9/165 (5%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           A  R  + G I Q+         A +   +  +  P+ +     G        + +++  
Sbjct: 437 ASARGIEAGHIFQLGLKYSQAMGATFTTENGTEE-PLWMGCYGIGVSRVAQAAVEQSYDK 495

Query: 545 NLPLWL---SPIQAIVTT---ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           +  +W    +P QA+V       +  V  A++I   L +  +    D R+E    K ++ 
Sbjct: 496 DGIIWPVAIAPYQAVVVIPNITDTEQVAAAEKIYADLTAAGIETLLDDRDERAGVKFKDA 555

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +  IP  I+ G +   E  + + +  S  +  +++   +  +  
Sbjct: 556 DLIGIPYRIVTG-RSLKEGKVEVVQRASKESSVIAVGSVVETVQD 599


>gi|163803792|ref|ZP_02197646.1| prolyl-tRNA synthetase [Vibrio sp. AND4]
 gi|159172411|gb|EDP57283.1| prolyl-tRNA synthetase [Vibrio sp. AND4]
          Length = 571

 Score =  147 bits (371), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 63/330 (19%), Positives = 115/330 (34%), Gaps = 17/330 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +   L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R+
Sbjct: 3   TSNYLLSTLKETPNDAEVVSHQLMLRAGMIRKLA---SGLYTWLPTGLRVLRKVENIVRQ 59

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           +I      E   P V    LW+++G  +     +        T +  R F L P      
Sbjct: 60  EIDNAGAVETLMPVVQPFELWEETGRSEKMGPELLRF-----TDRHTRPFVLSPTAEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
            ++  + + SY++LP+ L +  + +R+E      G+MR R F   DA+ F    E +   
Sbjct: 115 TSLVRNEVSSYKQLPLNLYQIQTKFRDERRPRF-GVMRAREFCMMDAYSFDIDKEGLEKS 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +H+     +   G E   V   +      GS      AE+    +  + ++     I
Sbjct: 174 YQAMHDAYCKAFDRMGLEYRPVLADSGAIGGSGSQEFHVLAESGEDLIAFSTESDYAANI 233

Query: 464 NTGVLLGEGAFYG-PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
                         P  E  L D          ++       +         SE+    +
Sbjct: 234 EKAEAAAPAFERAQPTQEMTLVDTPNAKTIAELVEQHGLSVEKTVKTLFVKASEEVDADI 293

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
           I   V G  E     + E    NLP   SP
Sbjct: 294 IALIVRGDHE-----LNEVKAENLPQVASP 318



 Score = 86.0 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 60/168 (35%), Gaps = 13/168 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           + R  + G I Q+        N   +    +    V++    +G  + R +   IE    
Sbjct: 405 LKRGIEVGHIFQLGNVYSQAMNCGVLGPDGKN---VILEMGCYGIGVSRVVASAIEQNHD 461

Query: 545 N----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                 P  L+P Q  +  +    +    E A+++   L +  + +  D R E       
Sbjct: 462 KYGIIWPDALAPFQVAIVPMNMHKSEEVKEAAEKLYAELTAMGVEVLFDDRKERPGVMFS 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  +  IP  I+ GD+   E +   +   S     V++ D +  +  +
Sbjct: 522 DMELIGIPHTIVIGDRSMKEGNFEYKNRRSGEKTAVAMTDIVEHVKAQ 569


>gi|152977868|ref|YP_001343497.1| prolyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
 gi|171472919|sp|A6VKR5|SYP_ACTSZ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|150839591|gb|ABR73562.1| prolyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
          Length = 571

 Score =  147 bits (371), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 49/249 (19%), Positives = 100/249 (40%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q   +       +++   H+ + R   +  +A   SG+  W   G K+ + + + +R 
Sbjct: 3   TSQYLFSTLKETPNDAQVVSHQLMLRAGMIRSMA---SGLYNWLPTGVKVLKKVENIIRE 59

Query: 286 KIKDD-YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LWQ+SG W+ Y   +       +     R F L P +    
Sbjct: 60  EMNKGGAIEVLMPVVQSAELWQESGRWEQYGPELLRFSDRGN-----RDFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP+ L +  + +R+E      G+MR R F   DA+ F T ++   + 
Sbjct: 115 TDLVRREVSSYKQLPLNLYQIQTKFRDEVRPRF-GVMRSREFVMKDAYSFHTTQESLQQT 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            + ++ +  +I+   G +   V+  T       S      A +    V+ + ++     I
Sbjct: 174 YEVMYQVYTNIFTRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVFSTESDFAANI 233

Query: 464 NTGVLLGEG 472
                +  G
Sbjct: 234 ELAEAIAVG 242



 Score = 90.2 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 63/168 (37%), Gaps = 14/168 (8%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           I R  + G I Q+        NA       +   P+++    +G  + R +   IE +  
Sbjct: 403 IKRGIEVGHIFQLGKKYSEAMNATVQGEDGK---PLVMTMGCYGIGVTRVVAAAIEQHHD 459

Query: 544 GNLPLWL----SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
               +W     +P    +  +    + S   +A+E+   LK+  + +  D R E      
Sbjct: 460 ERGIIWPTDEIAPFTVAIVPMNMHKSESVRAFAEELYQTLKAQGVDVIFDDRKERPGVMF 519

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +  +  +P +++ G+K   +  I  +   +   Q ++    +  L +
Sbjct: 520 ADMELIGVPHMVVIGEKNLDKGEIEYKNRRNGEKQMIAKDRLLAFLAE 567


>gi|89075398|ref|ZP_01161815.1| prolyl-tRNA synthetase [Photobacterium sp. SKA34]
 gi|89048814|gb|EAR54384.1| prolyl-tRNA synthetase [Photobacterium sp. SKA34]
          Length = 571

 Score =  147 bits (371), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 51/264 (19%), Positives = 98/264 (37%), Gaps = 12/264 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +   L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R+
Sbjct: 3   TSNYLLSTLKETPNDAEIISHQLMLRAGMIRKLA---SGLYAWLPTGLRVLRKVENIVRQ 59

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           +I      E   P V    LW+++G  +     +        T +  R F L P      
Sbjct: 60  EIDNAGAIETLMPVVQPFELWEETGRSEKMGPELLRF-----TDRHARPFVLSPTAEEVF 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
            ++  + + SY++LP+ L +  + +R+E      G+MR R F   DA+ F    E +   
Sbjct: 115 TSLVRNEVNSYKQLPLNLYQIQTKFRDERRPRF-GVMRAREFCMMDAYSFDIDKEGLQKS 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +H+     +   G E   V   +      GS      AE+    +  + ++     I
Sbjct: 174 YDAMHDAYCKAFDRMGLEYRPVLADSGAIGGSGSQEFHVLAESGEDLIAFSTESDYAANI 233

Query: 464 NTGVLLGEGAFYG-PKFEYILKDA 486
                L        P  E  + D 
Sbjct: 234 EKAEALAPAHNNAEPTVELSVIDT 257



 Score = 84.8 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 63/167 (37%), Gaps = 13/167 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           + R  + G I Q+      + N   ++++ +     ++    +G  + R +   IE    
Sbjct: 405 LKRGIEVGHIFQLGNAYSEKMNCGVLDANGKNA---ILEMGCYGIGVSRVVASAIEQNHD 461

Query: 545 N----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                 P  L+P    +  +    +    E A+++   L +  + +  D R E       
Sbjct: 462 ENGIIWPDALAPFHVSIVPMNMAKSEEVKEAAEKLYADLTAAGIEVLFDDRKERPGVMFA 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +H +  IP  I+ G++      +  +   +   + V++ D +  L +
Sbjct: 522 DHELLGIPHTIVIGNRSLENGEMEYKNRRTGIKEAVAVNDVVTFLKQ 568


>gi|253689709|ref|YP_003018899.1| prolyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|259511609|sp|C6DDF6|SYP_PECCP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|251756287|gb|ACT14363.1| prolyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 572

 Score =  147 bits (371), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 50/276 (18%), Positives = 102/276 (36%), Gaps = 27/276 (9%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYMLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGLRVLRKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E++ P V    LW +SG WD Y   +       +     R F L P +    
Sbjct: 60  EMNNAGAIEVSMPVVQPADLWVESGRWDQYGPELLRFVDRGE-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + + SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++     
Sbjct: 115 TDLIRNEISSYKQLPLNFFQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHTSQESLQVT 173

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
                +  +  + F    +  +        +G +A  +            +  S +D I 
Sbjct: 174 YDA--MYAAYSQIFSRMDLDFRAVQADTGSIGGNASHE---------FQVLAASGEDDIV 222

Query: 465 TGVLLGEGAFYGPKFEY--ILKDAIGRDWQCGTIQV 498
                     Y    E    +   +GR      + +
Sbjct: 223 FSTDSD----YAANIELAEAVAPKLGRAEAKEELHL 254



 Score = 81.0 bits (198), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 26/164 (15%), Positives = 50/164 (30%), Gaps = 11/164 (6%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           I R  + G I Q+         A             M    +   + R +   IE     
Sbjct: 405 IKRGIEVGHIFQLGSKYSEALKATVQGEDGRNQTLTMGCYGI--GVTRVVAAAIEQNHDE 462

Query: 546 ----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
                P  ++P    +  +         E A++I   L++  + +  D R E       +
Sbjct: 463 RGIIWPDAIAPFHVAILPMNMHKSFRVKEVAEDIYQQLRAKGIEVLLDDRKERPGVMFAD 522

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
             +  +P  I+ GD+      I  +       Q +   + +  L
Sbjct: 523 MELIGVPHTIVIGDRNLDSEEIEYKHRRIGEKQMIKTNEIVDFL 566


>gi|119484696|ref|ZP_01619178.1| prolyl-tRNA synthetase [Lyngbya sp. PCC 8106]
 gi|119457514|gb|EAW38638.1| prolyl-tRNA synthetase [Lyngbya sp. PCC 8106]
          Length = 604

 Score =  147 bits (370), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 60/249 (24%), Positives = 95/249 (38%), Gaps = 8/249 (3%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++           E+E   H+ L R   +  I   GSG+  +    W++ Q +   +R +
Sbjct: 4   SKMLFVTLREDPAEAEIPSHKLLVRAGYIRRI---GSGIYAYLPLMWRVLQKVSQIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     EE   PQV    LWQ+SG WD+Y      +    D  +  R  AL P +     
Sbjct: 61  MNATGAEECLLPQVQPAELWQESGRWDTYTKAEGIMFALRD--RRNRDLALGPTHEEVIT 118

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    ++SY++LP+ L +  + +R+E      GLMR R F   D + F   E+      
Sbjct: 119 TIAKEMIRSYQQLPLHLYQIQTKFRDEIRPRF-GLMRGREFIMKDGYSFHIDEESLKATY 177

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
           K +     +I    G     V+  +      GS      AE     VL T        + 
Sbjct: 178 KDMDRAYRNILTRSGLAFRAVEADSGAIGGSGSQEFMVLAEAGEDEVLYTEDGKYAANVE 237

Query: 465 TGVLLGEGA 473
             V L   A
Sbjct: 238 KAVSLPADA 246



 Score = 80.6 bits (197), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 63/162 (38%), Gaps = 9/162 (5%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I Q+         A   N   E+  P+++     G        + +++  +  
Sbjct: 435 RGIEVGHIFQLGTKYSQMMGATCTNEKGEEI-PLVMGCYGVGVSRLAQSAVEQSYDKDGI 493

Query: 548 LWL---SPIQAIV-TTITSS--AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W    +P  AI+     +    +E A+ +   L    +    D RNE    K ++  + 
Sbjct: 494 IWPVAIAPYHAIITIPNINDTQQLETAENLYTQLNQVGIETLLDDRNERAGVKFKDADLI 553

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            IP  I+ G +      + I    + T+Q+V++ D +  L K
Sbjct: 554 GIPYRIVTG-RSLKSGKVEIVERATHTSQEVAVEDVVSYLQK 594


>gi|113869200|ref|YP_727689.1| prolyl-tRNA synthetase [Ralstonia eutropha H16]
 gi|123133602|sp|Q0K6Q0|SYP_RALEH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|113527976|emb|CAJ94321.1| Prolyl-tRNA synthetase [Ralstonia eutropha H16]
          Length = 573

 Score =  147 bits (370), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 52/280 (18%), Positives = 112/280 (40%), Gaps = 11/280 (3%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       ++E   H+ + R   +  +   G+G+  +   G ++ + + + +R 
Sbjct: 3   ASQFFISTLKEAPADAEIVSHKLMMRAGMIKKL---GAGIYNYMPIGLRVIRKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E++ P +    LWQ++G WD     +  +K      +  R FA++P +    
Sbjct: 60  EMNRAGAVELSMPVIQPAELWQETGRWDKMGPELLRLKD-----RHERDFAVQPTSEEVV 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
             +    ++SY++LPV   +  + +R+E      G+MR R FT  DA+ F    + +   
Sbjct: 115 TDIARSEIRSYKQLPVNFYQIQTKFRDERRPRF-GIMRGREFTMKDAYSFDRDTDGLRKS 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +++  + I++ FG E   V          GS      A+     ++    +     +
Sbjct: 174 YENMYDAYVRIFRRFGLEFRAVAADNGAIGGSGSHEFHVIADTGEDAIVYCPTSDYAANM 233

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLP 503
                L   A      E ++K A     +C  +     +P
Sbjct: 234 EAAEALPLLASRAAPAEDLVKTATPEKAKCEHVAEFLGIP 273



 Score = 83.7 bits (205), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 30/169 (17%), Positives = 56/169 (33%), Gaps = 16/169 (9%)

Query: 484 KDAIGRDWQCGTIQVDFN------LPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
            D  G    C  I+V              NA +++ +  K  P+ +     G   R +G 
Sbjct: 398 PDGQGTLEICRGIEVGHVFMLGTRYSESMNATFLDENG-KTQPMQMGCYGIGVT-RILGA 455

Query: 538 MIENFKGN----LPLWLSPIQAIVTTITSSAVEY----AQEIANLLKSHHLSIETDFRNE 589
            IE          P  ++P   ++  +     E     A  I   L +  + +  D R E
Sbjct: 456 AIEQNFDERGIIWPAAIAPFAVVICPVGYDRSEAVKAEADRIHAELLAAGVDVILDDRGE 515

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
                  +  +  +P  ++ GD+   E  +  +         VS+ D +
Sbjct: 516 RPGVMFADWELIGVPHRVVVGDRGLKEGKVEYQGRRDAQATAVSVADVV 564


>gi|220961892|gb|ACL93383.1| threonyl-tRNA synthetase [Streptococcus thermophilus]
          Length = 165

 Score =  147 bits (370), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 73/167 (43%), Positives = 120/167 (71%), Gaps = 5/167 (2%)

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQIEKKMQE 128
           L ++RHS AH+ A+A + ++P++   +GP IEDGFYYD D +    S+++L +IE++M++
Sbjct: 1   LPILRHSAAHLFAQAARRLFPDIHFGVGPAIEDGFYYDTDNQAGQISNEDLPRIEEEMKK 60

Query: 129 IIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKE-NVTLYRQGEWFDLCRGPH 187
           I+  + P +++ ++ ++ARE+F+   + YK+E++E     +  +T+YRQGE+ DLCRGPH
Sbjct: 61  IVKENFPSIREEVTKDEAREIFK--NDPYKLELIEEHSEDDGGLTIYRQGEYVDLCRGPH 118

Query: 188 VRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
           V STG+++ F  L  VAGAYWRG+S+  M+ RIYGTAW  +++L  Y
Sbjct: 119 VPSTGRIQIFHLL-NVAGAYWRGNSDNAMMQRIYGTAWFDKKDLKAY 164


>gi|269467800|gb|EEZ79555.1| prolyl-tRNA synthetase [uncultured SUP05 cluster bacterium]
          Length = 560

 Score =  147 bits (370), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 42/241 (17%), Positives = 92/241 (38%), Gaps = 11/241 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            T   +        +++   H+ + R      I++  SG+  +   G ++ + + + +R 
Sbjct: 3   TTNLLIPTQKEAPNDAQIISHQLMIRAG---LISKLASGLYSYLPMGLRVLKKVEAIIRE 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +E+  P      LWQ+SG W+ Y   +          +  R F L P +    
Sbjct: 60  EMNKSGAQEVLMPVAQPAELWQESGRWEQYGPELLRFND-----RHNRKFCLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    ++SY++LP+   +  + +R+E      G+MR R F   DA+ F   +    + 
Sbjct: 115 THLAAQYIRSYKQLPMNFYQIQTKFRDEIRPRF-GVMRSREFIMKDAYSFHLDQNSLQQT 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +H    +I+   G +   V   +       S      A++    +  + ++     I
Sbjct: 174 FDVMHQTYCNIFNRLGLDYRPVLADSGSIGGDNSVEFHVLADSGEDAICFSDRSDYAANI 233

Query: 464 N 464
            
Sbjct: 234 E 234



 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 24/165 (14%), Positives = 54/165 (32%), Gaps = 11/165 (6%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           I R  + G I Q+         A  +    +     M    +   + R I   IE    +
Sbjct: 394 IKRGIEVGHIFQLGTKYSQAMKANVIGESGKAVTTTMGCYGI--GVTRVIAASIEQNHDD 451

Query: 546 ----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
                P  ++P Q ++  I    ++   + A ++        + +  D R E       +
Sbjct: 452 RGIIFPESIAPFQVVIVPINYNKSTRVKDLADQLYRQCLDAGIEVLLDDRKERAGIMFAD 511

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             +  IP  ++  D  A   ++  +   +    +V   + +  + 
Sbjct: 512 SELLGIPHRMVLSDTHADNGNVEYKARNNPDKVEVKFDEVLSFIQ 556


>gi|219669716|ref|YP_002460151.1| prolyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
 gi|254782897|sp|B8FR28|SYP_DESHD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|219539976|gb|ACL21715.1| prolyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
          Length = 575

 Score =  147 bits (370), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 43/195 (22%), Positives = 81/195 (41%), Gaps = 11/195 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q           E+E   H+ L R   +    +  +G+  +   G ++ + +   +R +
Sbjct: 4   SQILNPTLREVPAEAEVVSHQLLVRAGLIR---KSAAGIYTYLPLGLRVLRKIEQIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E+  P +    LW++SG WD Y   +  +       +  R F L P +     
Sbjct: 61  MDAKGGQEVLLPIIQPAELWRESGRWDLYGQELMRLND-----RHNREFCLGPTHEEIIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    ++SY++LP+ L +  + YR+E      GLMR R F   D + F   E    E  
Sbjct: 116 DLIRGEIRSYKQLPLLLYQIQNKYRDERRPRF-GLMRGREFIMKDLYSFDRDEAGLAESY 174

Query: 406 -KIHNLIISIYKDFG 419
            K+++    I+   G
Sbjct: 175 KKMYDAYTRIFTRCG 189



 Score = 90.6 bits (223), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 27/168 (16%), Positives = 60/168 (35%), Gaps = 11/168 (6%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G +  +        NA +++ +    HP ++     G        + +N   +  
Sbjct: 406 RGIEVGQVFKLGTKYSKALNAVFLDENGA-EHPCVMGCYGIGVSRTMAAAIEQNNDKDGI 464

Query: 548 LWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W    +P   IV  +        E  + +   L    +    D R+E    K ++  + 
Sbjct: 465 IWPIPIAPYHVIVVPVNMKDDQVRETGEALYQELLKLGVEAVLDDRDERPGVKFKDADLV 524

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA---IPILTKESL 646
             P+ +  G K  +   + +R   +   Q V + +    I  + +E+L
Sbjct: 525 GYPLRVTVGSKTLANGEVELRDRKTGEVQLVKVEELAGRIQGMIREAL 572


>gi|315918544|ref|ZP_07914784.1| prolyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
 gi|317059560|ref|ZP_07924045.1| prolyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|313685236|gb|EFS22071.1| prolyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|313692419|gb|EFS29254.1| prolyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
          Length = 569

 Score =  147 bits (370), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 54/244 (22%), Positives = 100/244 (40%), Gaps = 11/244 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  +       +E+E   H+ L R   +  +A   SG+  +   G++  + + + +R 
Sbjct: 3   FSKAYIKTLKETPKEAEIISHQLLLRAGMIKKLA---SGLYTYLPLGFRTLKKVENIIRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +E+  P +    LWQ+SG W+     M  +K      +  R F L P N    
Sbjct: 60  EMDRAGSQELLMPVLQPAELWQESGRWNVMGEEMVRLKD-----RHQRDFVLGPTNEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
             +  + + SY+ LP+ L    +  R+E      GLMR R F   DA+ F T  E +  E
Sbjct: 115 TDIVRNDISSYKSLPINLYHIQTKVRDERRPRF-GLMRSREFIMKDAYSFHTSQESLDEE 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              + N    I++  G +   V+  +      GS      AE+    ++ +   S    +
Sbjct: 174 FENMKNTYTRIFERCGLKFRPVEADSGAIGGSGSQEFHVLAESGEDEIIYSDGCSYAANV 233

Query: 464 NTGV 467
            T +
Sbjct: 234 ETAI 237



 Score = 82.9 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/162 (19%), Positives = 66/162 (40%), Gaps = 9/162 (5%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  +CG I  +         A Y++   E    +++     G        + +N+  +  
Sbjct: 405 RGIECGHIFKLGDKYSKALGASYLDEKGESKI-MLMGCYGIGVGRTMAAAIEQNYDEHGI 463

Query: 548 LW---LSPIQAIVTT---ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W   L+P    V       +  ++ A++I   L + HL    D R+E   +K ++  + 
Sbjct: 464 IWPSALAPYLVDVIPANIKNAEQMQLAEKIYEQLNAEHLDAMLDDRDERPGFKFKDADLI 523

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             P  +ICG K A+E  + ++   +  T ++ + + I  +  
Sbjct: 524 GFPFKVICGKK-AAENIVELKIRKTGETFEIPVDEIISKIKD 564


>gi|56459994|ref|YP_155275.1| prolyl-tRNA synthetase [Idiomarina loihiensis L2TR]
 gi|81821672|sp|Q5QW31|SYP_IDILO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|56179004|gb|AAV81726.1| Prolyl-tRNA synthetase [Idiomarina loihiensis L2TR]
          Length = 567

 Score =  147 bits (370), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 50/248 (20%), Positives = 98/248 (39%), Gaps = 11/248 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  L+       ++E   H+ + R   +  +A    G+  W   G ++ + + + +R +
Sbjct: 4   SKYLLSTLKETPSDAEIVSHQLMLRAGMIRKVAA---GLYTWTPTGLRVLRKVENVVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++  +  EI  P V    LWQ+SG WD Y   +  +K      ++ R F L P +     
Sbjct: 61  MEAINALEILMPMVQPADLWQESGRWDDYGPELLRIKD-----RNQRDFLLGPTHEEIIS 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNEC 404
            +    + SY++LP+ L +  + +R+E      G+MR R F   DA+ F  T E +    
Sbjct: 116 QLVRKEVSSYKQLPLTLFQIQTKFRDEIRPRF-GVMRAREFLMKDAYSFHLTDESLQKTY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
             ++     I++  G +   V   T       S      A +    +  +  +     + 
Sbjct: 175 DDMYKAYCRIFERLGLDYRPVIADTGSIGGSHSHEFHVLASSGEDAIAFSDSSDYAANVE 234

Query: 465 TGVLLGEG 472
               L   
Sbjct: 235 MAEALAPA 242



 Score = 89.5 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 63/173 (36%), Gaps = 12/173 (6%)

Query: 484 KDAIGRDWQCGTIQVDFNL---PSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMI 539
               G+      I+V           +A  V   SE      +    +G  + R +   I
Sbjct: 394 PCGQGKVKIARGIEVGHIFQLGKKYSDAMKVGVLSESGKHETLTMGCYGIGVSRIVAAAI 453

Query: 540 ENFKGN----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           E          P  L+P Q ++  +    ++   E A+++   LK+  + +  D R E  
Sbjct: 454 EQNNDERGICWPEALAPFQVVIVPMNMHKSARVQEAAEKLYTDLKAQGIDVLFDDRKERP 513

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
                +  +  IP  ++ G++   E  +  +       QK++L D I  + ++
Sbjct: 514 GVMFTDMELIGIPHQVVVGERNLDENQVEYQSRKGGEKQKINLDDCISFIQQQ 566


>gi|116515089|ref|YP_802718.1| prolyl-tRNA synthetase [Buchnera aphidicola str. Cc (Cinara cedri)]
 gi|116256943|gb|ABJ90625.1| prolyl-tRNA synthetase [Buchnera aphidicola str. Cc (Cinara cedri)]
          Length = 422

 Score =  147 bits (370), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 73/420 (17%), Positives = 155/420 (36%), Gaps = 25/420 (5%)

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR 284
           +  +  L+      +  E   H+ + R   +  ++   SG+  W   G++I + +   + 
Sbjct: 2   YTKKYLLSTLKEKPKNIESISHQLMLRSGMIRMLS---SGIYTWLPTGYRIIKKITKIIS 58

Query: 285 RKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPG 343
             + +    EI  P +  ++LW++SG    Y   +  +     T +  + + L P +   
Sbjct: 59  SILNNHGCMEICMPIIQPENLWKKSGRKKLYGEELIKI-----TDRRNKKYVLSPTHEEA 113

Query: 344 HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFN 402
              +    + SY++LP+   +    +R+E      G++R   F   DA+ F   K+ +  
Sbjct: 114 INYICQQEIHSYKQLPITFYQIQKKFRDEIRPRF-GVIRTIEFLMKDAYSFHINKDSLKK 172

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV--LDTIKNSSQ 460
               + N+ I I+K       +VK  ++      SD     +E     +  L     +  
Sbjct: 173 TYENMKNIYIKIFKKLKLNFKIVKAHSKIMGGSISDEFHAISEMGENKIIFLKKSNYAFN 232

Query: 461 DRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHP 520
                        +   K + ++K       + G I       S+   FY+     K   
Sbjct: 233 YNEFNEKKKKFKNYLLQKEKKLIK---KNSIEIGHIFQIEKKYSKNTNFYIQDKKNKKKL 289

Query: 521 VMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTITSSAVEYAQEIANLLK 576
           + +     G I R I  +IE          P  ++P Q  +  I     +  ++IA  L 
Sbjct: 290 LNMGCYGIG-INRIISSIIEQNHDKYGIIWPNCIAPFQVFILPINMYKNKKIKKIAKKLY 348

Query: 577 ----SHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
               + ++ +  D RNE++     + ++  IP  I+      + + + +      + +KV
Sbjct: 349 KKLINKNIDVLFDNRNESLGKMFADMNLIGIPFGILISKNTITSKKVELYSRKKNSKKKV 408


>gi|328885400|emb|CCA58639.1| Prolyl-tRNA synthetase [Streptomyces venezuelae ATCC 10712]
          Length = 566

 Score =  147 bits (370), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 56/325 (17%), Positives = 118/325 (36%), Gaps = 21/325 (6%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q           ++E   H+ L R   +   A    G+  W   G K+   +   +R +
Sbjct: 10  SQLMAKTLRDDPADAEVLSHKLLVRAGYVRRTAA---GIWSWLPLGKKVLSNIERIVREE 66

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E+  P +L +  ++ +G WD Y A +F ++      +    + L P +     
Sbjct: 67  MDAIGAQEVTLPALLPREPYEATGRWDEYGAELFRLQD-----RKGGDYLLGPTHEEIFT 121

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +      SY++LPV L +  + +R+E      G++R R F   D++ F T+++   +  
Sbjct: 122 LLVKDQCSSYKDLPVILYQIQNKFRDEARPR-AGILRGREFLMKDSYSFDTEDEGLAQSY 180

Query: 406 KIH-NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIK---NSSQD 461
            +H      +++  G +  +V  +        S+     AE       D       ++ +
Sbjct: 181 ALHRQAYQRVFERLGLDYRIVAATAGAMGGSKSEEFLAPAEAGEDTFADCPNCDFAANTE 240

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
            I+  +   +G+      E    D      +     +     +      V    E     
Sbjct: 241 AISYELQPVDGSAVPAAEEIPTPDT--PTIETLAASLGVPASATLKNLLVKVDGE----- 293

Query: 522 MIHRAVFGSIERFIGIMIENFKGNL 546
           ++   V G  E  +G + E+F    
Sbjct: 294 IVAVGVPGDREVDMGKVEEHFAPAT 318



 Score = 85.6 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/174 (16%), Positives = 67/174 (38%), Gaps = 12/174 (6%)

Query: 476 GPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
            PK    LK  + R  + G I Q+            +  + +     M    +   + R 
Sbjct: 397 CPKCGTGLK--LDRAIEIGHIFQLGRKYADALKLDVLGQNGKPVRVTMGSYGI--GVSRA 452

Query: 535 IGIMIENFKGNLPL-WLSPIQA----IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE 589
           +  + E       L W + +      +V    +   E A E+++ L +  L +  D R  
Sbjct: 453 VAALAEQTADEKGLCWPAEVAPADVHVVAAGKALQTELALEVSDKLSAAGLRVLVDDRAG 512

Query: 590 -TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +   K  +  +  +P I++ G + + E  + ++   +   +++++ +A+  LT
Sbjct: 513 VSPGVKFTDAELMGVPKILVAGRR-SGEGIVELKDRRTGDREELTVEEALTRLT 565


>gi|312111641|ref|YP_003989957.1| prolyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
 gi|311216742|gb|ADP75346.1| prolyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
          Length = 567

 Score =  147 bits (370), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 55/244 (22%), Positives = 95/244 (38%), Gaps = 27/244 (11%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E + H+ L R      I +  SGV  +   G ++ Q + + +R ++      E+  P 
Sbjct: 17  DAEVKSHQLLLRAG---FIRQSASGVYTFLPLGQRVLQKVEAIIREEMNRAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQQSG W SY   +  +K      +  R FAL P +      +    +KSY+ L
Sbjct: 74  LQPAELWQQSGRWYSYGPELMRLKD-----RHERNFALGPTHEEMITTLVRDEVKSYKRL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKD 417
           P+ L +    +R+E      GL+R R F   DA+ F T  E +     K++    +I++ 
Sbjct: 129 PLTLYQIQVKFRDEKRPRF-GLLRGREFIMKDAYSFHTSQESLDETYNKMYEAYSNIFRR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
            G     V   +       +             VL  I   +       +   + + Y  
Sbjct: 188 CGLNFRAVIADSGAIGGKDTHEF---------MVLSEIGEDT-------IAYSDASDYAA 231

Query: 478 KFEY 481
             E 
Sbjct: 232 NIEM 235



 Score = 77.1 bits (188), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 61/163 (37%), Gaps = 11/163 (6%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G +  +        NA Y++ +      +M    +   + R +  + E F     
Sbjct: 404 RGIEVGHVFKLGTRYSEALNATYLDENGRSQTMIMGCYGI--GVSRLVAAIAEQFADENG 461

Query: 546 --LPLWLSPIQAIVTT---ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              P+ ++P    + T    +    + A E    L+   L +  D R E    K  +  +
Sbjct: 462 LVWPVAVAPFHVHLITANAKSEEQRQLADEWYEKLRQAGLEVLYDDRPERAGVKFADSDL 521

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             IP+ +  G + A E  + ++   +  + +V + + I  + +
Sbjct: 522 IGIPVRVTVGKR-AGEGVVEVKVRQTGESVEVPVHELIDTIQR 563


>gi|89895282|ref|YP_518769.1| hypothetical protein DSY2536 [Desulfitobacterium hafniense Y51]
 gi|114152191|sp|Q24UG7|SYP_DESHY RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|89334730|dbj|BAE84325.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 575

 Score =  147 bits (370), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 43/195 (22%), Positives = 81/195 (41%), Gaps = 11/195 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q           E+E   H+ L R   +    +  +G+  +   G ++ + +   +R +
Sbjct: 4   SQILNPTLREVPAEAEVVSHQLLVRAGLIR---KSAAGIYTYLPLGLRVLRKIEQIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E+  P +    LW++SG WD Y   +  +       +  R F L P +     
Sbjct: 61  MDAKGGQEVLLPIIQPAELWRESGRWDLYGQELMRLND-----RHNREFCLGPTHEEIIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    ++SY++LP+ L +  + YR+E      GLMR R F   D + F   E    E  
Sbjct: 116 DLIRGEIRSYKQLPLLLYQIQNKYRDERRPRF-GLMRGREFIMKDLYSFDRDEAGLAESY 174

Query: 406 -KIHNLIISIYKDFG 419
            K+++    I+   G
Sbjct: 175 KKMYDAYTRIFTRCG 189



 Score = 90.6 bits (223), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 27/168 (16%), Positives = 60/168 (35%), Gaps = 11/168 (6%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G +  +        NA +++ +    HP ++     G        + +N   +  
Sbjct: 406 RGIEVGQVFKLGTKYSKALNAVFLDENGA-EHPCVMGCYGIGVSRTMAAAIEQNNDKDGI 464

Query: 548 LWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W    +P   IV  +        E  + +   L    +    D R+E    K ++  + 
Sbjct: 465 IWPIPIAPYHVIVVPVNMKDDQVRETGEALYQELLKLGVEAVLDDRDERPGVKFKDADLV 524

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA---IPILTKESL 646
             P+ +  G K  +   + +R   +   Q V + +    I  + +E+L
Sbjct: 525 GYPLRVTVGSKTLANGEVELRDRKTGEVQLVKVEELAGRIQGMIREAL 572


>gi|269101961|ref|ZP_06154658.1| prolyl-tRNA synthetase [Photobacterium damselae subsp. damselae CIP
           102761]
 gi|268161859|gb|EEZ40355.1| prolyl-tRNA synthetase [Photobacterium damselae subsp. damselae CIP
           102761]
          Length = 572

 Score =  147 bits (370), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 51/264 (19%), Positives = 98/264 (37%), Gaps = 12/264 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +   L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R+
Sbjct: 3   TSNYLLSTLKETPNDAEIISHQLMLRAGMIRKLA---SGLYTWLPTGLRVLRKVENIVRQ 59

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           +I      E   P V    LW+++G  +     +        T +  R F L P      
Sbjct: 60  EIDNAGAVETLMPVVQPFELWEETGRSEKMGPELLRF-----TDRHARPFVLSPTAEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
            ++  + + SY++LP+ L +  + +R+E      G+MR R F   DA+ F    E +   
Sbjct: 115 TSLVRNEVSSYKQLPLNLYQIQTKFRDERRPRF-GVMRAREFCMMDAYSFDIDKEGLQKS 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +H+     +   G E   V   +      GS      AE+    +  + ++     I
Sbjct: 174 YDAMHDAYCKAFDRMGLEYRPVWADSGAIGGNGSQEFHVLAESGEDLIAFSTESDYAANI 233

Query: 464 NTGVLLGEGAFY-GPKFEYILKDA 486
                L        P  E  + D 
Sbjct: 234 EKAEALAPAHDRAAPTVELSVIDT 257



 Score = 88.3 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 31/166 (18%), Positives = 68/166 (40%), Gaps = 13/166 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           + R  + G I Q+      + N   ++S+ +    V++    +G  + R +   IE N  
Sbjct: 405 LKRGIEVGHIFQLGTTYSEKMNCGVLDSNGKN---VILEMGCYGIGVSRVVASAIEQNND 461

Query: 544 GNLPLWL---SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
            N  +W    +P Q  +  +    +    E A+++   L +  + +  D R E       
Sbjct: 462 ENGIIWPDAIAPFQVSIVPMNMAKSEEVKEAAEKLYADLTAAGIDVLFDDRKERPGVMFA 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +H +  IP  I+ G++      +  +   + T + V++ D +  +T
Sbjct: 522 DHELIGIPHTIVIGNRSLENGEMEYKNRRTGTKENVAVTDIVAFVT 567


>gi|73542636|ref|YP_297156.1| prolyl-tRNA synthetase [Ralstonia eutropha JMP134]
 gi|114152236|sp|Q46X21|SYP_RALEJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|72120049|gb|AAZ62312.1| Prolyl-tRNA synthetase, bacterial [Ralstonia eutropha JMP134]
          Length = 573

 Score =  147 bits (370), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 46/221 (20%), Positives = 95/221 (42%), Gaps = 11/221 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       ++E   H+ + R   +  +   G+G+  +   G ++ + + + +R 
Sbjct: 3   ASQFFISTLKEAPADAEIVSHKLMMRAGMIKKL---GAGIYNYMPVGLRVIRKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E++ P +    LWQ++G WD     +  +K      +  R FA++P +    
Sbjct: 60  EMNRAGAVELSMPVIQPAELWQETGRWDKMGPELLRLKD-----RHERDFAVQPTSEEVV 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
             +    ++SY++LPV   +  + +R+E      G+MR R FT  DA+ F    E +   
Sbjct: 115 TDIARSEIRSYKQLPVNFYQIQTKFRDERRPRF-GIMRGREFTMKDAYSFDRDAEGLKKS 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
              +++  + I++ FG E   V          GS      A
Sbjct: 174 YENMYDAYVRIFQRFGLEFRAVAADNGAIGGSGSHEFHVIA 214



 Score = 81.8 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 26/159 (16%), Positives = 58/159 (36%), Gaps = 11/159 (6%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G +  +        NA +++ +  K  P+ +     G   R +G  IE       
Sbjct: 408 RGIEVGHVFMLGTRYSESMNATFLDENG-KTQPMQMGCYGIGVT-RILGAAIEQNFDERG 465

Query: 546 --LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
              P  ++P + +V  +    + +    A  I   L +  + +  D R E       +  
Sbjct: 466 IIWPAAIAPFEVVVCPVGYDRSEAVKAEADRIHAELLAAGVDVIIDDRGERPGVMFADWE 525

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           +  +P  ++ GD+   E  +  +        +V++ D +
Sbjct: 526 LIGVPHRVVVGDRGLKEGKVEYQGRRDAQATQVAVADVV 564


>gi|238021436|ref|ZP_04601862.1| hypothetical protein GCWU000324_01336 [Kingella oralis ATCC 51147]
 gi|237868416|gb|EEP69422.1| hypothetical protein GCWU000324_01336 [Kingella oralis ATCC 51147]
          Length = 611

 Score =  146 bits (369), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 47/255 (18%), Positives = 89/255 (34%), Gaps = 12/255 (4%)

Query: 190 STGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKL 249
             G    F      +      D    ++      A +T  + +Q+     +    +    
Sbjct: 8   WLGLAGAFCHFQAASTPRSARDF--AIIRPFRFIAQDTPMKASQFFISTLKEAPAEAVLA 65

Query: 250 AREMDLFH--IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ 306
           + ++ L    I  + SG+  W   G ++ + + + +R ++      E+  P V    LW+
Sbjct: 66  SHKLMLRAGLIKANASGLYTWMPMGLRVLRKVEAIVREEMNRAGAIELLMPVVQPADLWK 125

Query: 307 QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFG 366
           +SG WD Y   +  +    D       F   P        +    + SY++LP       
Sbjct: 126 ESGRWDFYGDELLRITDRHDNA-----FCFSPTCEELITDIVRKEINSYKQLPKNFYHIQ 180

Query: 367 SVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMV 425
           + +R+E      G+MR R F   DA+ F    E +      +++    I+   G +   V
Sbjct: 181 TKFRDERRPRF-GVMRAREFVMKDAYSFHADFESLKATYQTMYDAYCRIFNRLGLDYRPV 239

Query: 426 KLSTRPEKRVGSDAL 440
              T      GS   
Sbjct: 240 AADTGSIGGTGSHEF 254



 Score = 84.4 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 31/164 (18%), Positives = 69/164 (42%), Gaps = 13/164 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGN 545
           R  + G + Q+     +  NA +++S+ +     ++    +G  I R +   IE N    
Sbjct: 449 RGIEVGHVFQLRDKYSAALNASFLDSNGKSQ---IMEMGCYGIGITRIVAAAIEQNNDER 505

Query: 546 LPLW---LSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
             +W   ++P   ++  +    ++S  E A +I   L++  + +  D R+E     + + 
Sbjct: 506 GIIWTEAMAPFSVVIVPMNYKKSNSVREAADQIYADLQAAGVDVLLDDRDERAGVLLNDS 565

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +  IP  I+ GD+   E ++      S  +  V L + +  + 
Sbjct: 566 ELLGIPHRIVIGDRALKEGNVEYAERRSGESISVPLNEIVAKIC 609


>gi|269123109|ref|YP_003305686.1| prolyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
 gi|268314435|gb|ACZ00809.1| prolyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
          Length = 574

 Score =  146 bits (369), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 56/244 (22%), Positives = 104/244 (42%), Gaps = 11/244 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  +  Y    +E+E   H+ + R   +  +     GV  +   G K+ + + + +R 
Sbjct: 3   FSKSFIKTYKEVPKEAETISHQLMLRASMIKQL---TRGVYTYLPLGLKVLKKIENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++   + +EI  P +    LWQ+SG W SY A +  +   ++     R F L P +    
Sbjct: 60  ELNKINAQEILMPVLQPADLWQESGRWFSYGAELMRLHDRNN-----RDFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNE 403
           V +F + + SY++LP+ + +  + +R+E      GLMR R F   DA+ F  T+E +  E
Sbjct: 115 VDLFRNIVTSYKDLPLNVYQIQTKFRDERRPRF-GLMRGREFIMKDAYSFHLTQECLDRE 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             K+      I++  G     V   T       S      A +    +L + K+     +
Sbjct: 174 YNKVKEAYCKIFERCGLNFRAVDADTGSIGGSESHEFMVLASSGEDDILYSDKSDYAANV 233

Query: 464 NTGV 467
              V
Sbjct: 234 EKAV 237



 Score = 71.7 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 67/182 (36%), Gaps = 13/182 (7%)

Query: 468 LLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAV 527
             G+ A  G   +        R  + G I       S      V +       V++    
Sbjct: 395 QKGDKALDGGTLDIA------RGIEVGHIFKLGKKYSAAMNTKVLNDKGVAETVIMGCYG 448

Query: 528 FGSIERFIGIMIENFKGNLPLWLSPIQAIV--TTITSSAVEYAQEIANLLKS----HHLS 581
            G        + +NF     +W   I   +    + +   E A+E++  + S    +++ 
Sbjct: 449 IGVSRVAAAAIEQNFDDFGIIWPKSIAPYLVDLILVNVKDEIAKEVSEKIYSDMLLNNID 508

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           +  D R+E   +K ++  +  IP+ +I G K A    + I+    + + ++ + D I  +
Sbjct: 509 VIYDDRDEKAGFKFKDADLIGIPLKVIVG-KGAVNGMVEIKHRDGSFSGEIKVEDVISYI 567

Query: 642 TK 643
            +
Sbjct: 568 KE 569


>gi|307822387|ref|ZP_07652619.1| prolyl-tRNA synthetase [Methylobacter tundripaludum SV96]
 gi|307736953|gb|EFO07798.1| prolyl-tRNA synthetase [Methylobacter tundripaludum SV96]
          Length = 569

 Score =  146 bits (369), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 47/244 (19%), Positives = 92/244 (37%), Gaps = 11/244 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            TQ  L        ++E   H+ + R   +  +A    G+  W   G ++ + +    R 
Sbjct: 3   TTQFPLNTVKETPADAEIASHQLMIRAGLIRKLAA---GLYTWLPLGLRVMRKVEKITRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           +++     E+  P +    LWQ++G W+ Y   +  +K   D     R F L P +    
Sbjct: 60  EMEKTGALEVLMPGLQPAELWQETGRWEQYGPELARLKDRHD-----RDFCLGPTHEEII 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + +KSY++LP+   +  S +R+E      G+MR R F   DA+ F    +     
Sbjct: 115 TDLARNEIKSYKQLPITYYQIQSKFRDEIRPRF-GVMRSREFIMKDAYSFHLDHESLQVT 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            + +H    +I+   G     V   +       S      A++    +  +  +     +
Sbjct: 174 YEAMHQAYTNIFNHLGLNFRAVIADSGSIGGAVSHEFHVLADSGEDAIAFSTDSEYAANV 233

Query: 464 NTGV 467
               
Sbjct: 234 EKAE 237



 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 29/176 (16%), Positives = 61/176 (34%), Gaps = 13/176 (7%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
           P  +   +  + R  + G I Q+         A  +N   +     ++    +G  I R 
Sbjct: 393 PSPDGKGQITLARGIEVGHIFQLGTKYSEAMKAGVINEGGKNQ---IMTMGCYGIGISRV 449

Query: 535 IGIMIENFKGN----LPLWLSPIQAIVTTITSSAVEYAQEIANLL----KSHHLSIETDF 586
           +   IE    +     P  L+P Q  +  +     E  +E +  L     +  + +  D 
Sbjct: 450 VAAAIEQNHDDKGIIWPTNLAPFQVALCPMNMHKSERLKEASEKLYQDLLAAGIDVLFDD 509

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           R     +   +  +  IP  I+ GD+     ++  +   +   +++   D I  L 
Sbjct: 510 RKVRAGFMFSDMELIGIPHCIVVGDRGLDSGTVEYKARTAEANEEIPFADIIDFLK 565


>gi|297617181|ref|YP_003702340.1| prolyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
 gi|297145018|gb|ADI01775.1| prolyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
          Length = 567

 Score =  146 bits (369), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 50/212 (23%), Positives = 90/212 (42%), Gaps = 11/212 (5%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
                    E+E   HR L R   +   A    G+  +   G+++ + +++ +R ++   
Sbjct: 8   FPTLREDPAEAETVSHRLLFRAGMVRKTAA---GIYTYLPLGFRVIKKIMNIVREEMDRA 64

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
             +E+  P +  + LW QSG W+ Y   MF +K      +  R F L P +      V N
Sbjct: 65  GGQEVGLPIIQPRELWAQSGRWEVYGDEMFRLKD-----RHQRDFCLGPTHEEVITDVVN 119

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIH 408
           H + SYR+LP+ L +  + YR+E      GL+R R F   D + F   E        K++
Sbjct: 120 HEVHSYRDLPLLLYQIQNKYRDEIRPRF-GLLRGREFIMKDLYSFDVDEAGLEVSYQKMY 178

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           +    +++  G +  +V+  +       S   
Sbjct: 179 DAYCRVFERLGLQYRVVEADSGAIGGNVSHEF 210



 Score = 83.7 bits (205), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 24/154 (15%), Positives = 57/154 (37%), Gaps = 8/154 (5%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I  +      +  A +++ +  K   +++     G        + +N   N  
Sbjct: 402 RGIETGHIFKLGTKYSGKMGATFLDENG-KERLMVMGCYGIGISRTMAAAVEQNHDENGI 460

Query: 548 LWL---SPIQAIVTTITSS---AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W    +P Q I+  + S     +E   ++ + L      +  D R++    K ++  + 
Sbjct: 461 IWPLAIAPYQIIIVPVNSKDGQQMEIGMKLYHELVKQGYEVIIDDRDQRAGVKFKDADLI 520

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
            +P+ I  G K      + I++      + V + 
Sbjct: 521 GVPVRITIGPKLLKAGQVEIKKRWENEVKGVPIE 554


>gi|113461448|ref|YP_719517.1| prolyl-tRNA synthetase [Haemophilus somnus 129PT]
 gi|123031424|sp|Q0I4S8|SYP_HAES1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|112823491|gb|ABI25580.1| prolyl-tRNA synthetase [Haemophilus somnus 129PT]
          Length = 571

 Score =  146 bits (369), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 52/263 (19%), Positives = 103/263 (39%), Gaps = 11/263 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  L+       +++   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSKYLLSTLKETPNDAQVVSHQLMLRAGMIRPLA---SGLYNWLPTGLRVLKKVENIVRE 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LWQ+S  W+ Y   +       +     R F L P +    
Sbjct: 60  EMNKSGAIEVEMPVVQPAELWQESQRWEQYGPELLRFVDRGN-----RDFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT-KEQMFNE 403
             + +  + SY++LP+ L +  + +R+E      G+MR R F   DA+ F T KE + N 
Sbjct: 115 TDLVHREVSSYKQLPLNLYQIQTKFRDEVRPRF-GVMRGREFLMKDAYSFHTSKECLQNT 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++    +I+   G +   V+  T       S      A++    ++ +  +     I
Sbjct: 174 YDVMYRTYNNIFTRLGLDFRAVQADTGSIGGSASHEFQVLAKSGEDDIVFSSNSDYAANI 233

Query: 464 NTGVLLGEGAFYGPKFEYILKDA 486
                +  G    P     L D 
Sbjct: 234 ELAEAVAIGQRQAPSATMELVDT 256



 Score = 86.0 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 59/168 (35%), Gaps = 14/168 (8%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           I R  + G I Q+         A           P  +    +G  + R +   IE    
Sbjct: 403 IKRGIEVGHIFQLGTKYSEAMKATVQGEDG---RPQTMIMGCYGIGVSRVVAATIEQCHD 459

Query: 545 -NLPLW----LSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
               +W    ++P    +  +    + +   +A+E+   L + ++ +  D R E      
Sbjct: 460 EKGIIWSSDEIAPFTVAIIPMNMYKSKNVQIFAEELYQSLLNKNVDVIFDDRKERPGVMF 519

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +  +  +P +I+ G+K   +  I  +   +   Q ++    +  L +
Sbjct: 520 ADMELIGVPHMIVIGEKNLEKGEIEYKNRRTGEKQIIAKEQVLDFLAQ 567


>gi|332307477|ref|YP_004435328.1| prolyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332174806|gb|AEE24060.1| prolyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 571

 Score =  146 bits (369), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 52/248 (20%), Positives = 95/248 (38%), Gaps = 11/248 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++   +   +R 
Sbjct: 3   TSQYLLSTQKETPADAEVISHQLMLRAGLVRKLA---SGLYTWLPTGLRVLNKVAQIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      EI  P V    LWQ+SG WD Y   +  VK      +  R F L P +    
Sbjct: 60  EMDRAGSLEILMPVVQPADLWQESGRWDEYGPELLRVKD-----RHFRDFVLGPTHEEVV 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNE 403
            A+  + + SY++LP+ + +  + +R+E      G+MR R FT  DA+ F  + E +   
Sbjct: 115 TALVKNEVSSYKQLPLNVYQIQTKFRDEVRPRF-GVMRGREFTMKDAYSFHLSDECLNKT 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             ++      +++    E   V           S      AE+    +  +  +     I
Sbjct: 174 YDEMFAAYCRVFERINLEFRPVIADNGSIGGNASHEFHVLAESGEDDIAFSNASDYAANI 233

Query: 464 NTGVLLGE 471
                   
Sbjct: 234 EKAEAAAP 241



 Score = 82.1 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 61/168 (36%), Gaps = 16/168 (9%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           I R  + G I Q+        N   ++ + +     +++   +G  + R +   IE    
Sbjct: 407 IKRGIEVGHIFQLGSKYSEALNCGVLDENGKHQ---VLNMGCYGIGVSRIVAAAIEQNHD 463

Query: 545 N----LPLWLSPIQAIVTTITSSAVEYAQEIANL----LKSHHLSIETDFRNETINYKIR 596
                 P  ++P +  +  +        Q++A      LK+  + +  D R E       
Sbjct: 464 KYGIIWPDAIAPFKVAIVPMNMHKSHRIQQVAEQMYAQLKAAGIEVLFDDRKERPGVMFN 523

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS---LLDAIPIL 641
           +  +  +P  I+ G++   E+ +  +   S   Q +    + D I  L
Sbjct: 524 DMELVGVPHTIVIGERNLDEQKVEYKNRRSGEKQLIDIPQIADFIATL 571


>gi|297539468|ref|YP_003675237.1| prolyl-tRNA synthetase [Methylotenera sp. 301]
 gi|297258815|gb|ADI30660.1| prolyl-tRNA synthetase [Methylotenera sp. 301]
          Length = 573

 Score =  146 bits (369), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 44/221 (19%), Positives = 85/221 (38%), Gaps = 11/221 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q           ++E   H  + R   +  +   GSG+  W   G ++ + + + +R 
Sbjct: 3   ASQFFFNTQKEAPNDAELPSHILMVRAGLIKRL---GSGLYSWMPLGLRVLRKVETIVRD 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V  + LW ++G W  +   M  +     T +  R F   P +    
Sbjct: 60  EMNKAGALELLMPAVQPRELWDETGRWAVFGPQMLKI-----TDRHSREFCFGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    ++SY++LP+   +  + +R+E      G+MR R F   DA+ F T        
Sbjct: 115 TDIARSEVRSYKQLPLNFYQIQTKFRDEIRPRF-GVMRAREFMMKDAYSFHTDFASLETT 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
              ++    +++   G +   VK  T      GS      A
Sbjct: 174 YANMYQAYSNVFNRLGLKFRAVKADTGAIGGDGSHEFHVLA 214



 Score = 83.7 bits (205), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 64/168 (38%), Gaps = 13/168 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN- 545
           R  + G I Q+        NA Y++  S+     ++    +G  + R +G  IE      
Sbjct: 409 RGIEVGHIFQLRTKYSEAMNATYLDEASQTQ---VMEMGCYGIGVSRIVGAAIEQGNDAR 465

Query: 546 ---LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
               P  ++P    +  I    + +    A +I   L +  +    D R E       E 
Sbjct: 466 GIIFPKSMAPFTVTICPIGYDKSEAVSAAANKIYADLNAAGIEALLDDRGERPGVMFAEA 525

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
            +  IP  ++ G++  ++ ++  +       Q V+L + +  + K +L
Sbjct: 526 DLMGIPHRLVIGERGLADGTVEYKGRTDAEAQMVALKNVVEFMQKVAL 573


>gi|284008500|emb|CBA75007.1| prolyl-tRNA synthetase [Arsenophonus nasoniae]
          Length = 571

 Score =  146 bits (369), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 66/332 (19%), Positives = 124/332 (37%), Gaps = 21/332 (6%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTLKETPADAEVISHKLMLRAGMIRKLA---SGLYDWLPTGVRVLRKVENIIRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      EI+ P V    LWQ+SG W+ Y   +       +     R F L P +    
Sbjct: 60  EMNRAGAIEISMPIVQPADLWQESGRWEQYGPELLRFVDRGE-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + + SY++LP+ L +  + +R+E      G+MR R F   DA+ F T +    + 
Sbjct: 115 TDLIRNEVTSYKQLPLNLYQIQTKFRDEVRPRF-GVMRSREFIMKDAYSFHTDQDSLQQT 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++    +I+   GF    V+  T       S      A++    ++ +  +     I
Sbjct: 174 YDAMYAAYSAIFTRIGFNFRAVQADTGSIGGNASHEFQVLADSGEDNIVFSTASDYAANI 233

Query: 464 NTGV---LLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHP 520
                  L  E A   P  +  L D          ++       +     + S +++   
Sbjct: 234 ELAEAICLSNERA--APVEDMRLVDTPNAKTIAELVEQHDLPIEKTIKTLIVSAAKESGH 291

Query: 521 VMIHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
            +I   V G  E     + E      PL  SP
Sbjct: 292 QLIALLVRGDHE-----LNEVKAEKHPLVASP 318



 Score = 85.6 bits (210), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 55/164 (33%), Gaps = 11/164 (6%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           I R  + G I Q+         A   N        V +     G   R +   IE    +
Sbjct: 405 IKRGIEVGHIFQLGTKYSEAMKASVQNEDGHNQT-VTMGCYGIGVT-RIVAAAIEQSHDD 462

Query: 546 ----LPLWLSPIQAIVTTITSSAVEYAQEIANLL----KSHHLSIETDFRNETINYKIRE 597
                P  ++P Q  +  +        +E+A  L    ++  + +  D R E       +
Sbjct: 463 KGIIWPDAIAPFQVAILPMNMHKSYRVKEVAERLYRDLQAKGIDVLLDDRKERPGVMFAD 522

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
             +  IP  I+ GD+      +  ++  +   + +++   +  L
Sbjct: 523 MELIGIPHTIVIGDRNLDNNQVEYKQRRNNEKEYINIAGIVDFL 566


>gi|222055493|ref|YP_002537855.1| prolyl-tRNA synthetase [Geobacter sp. FRC-32]
 gi|254782902|sp|B9LZK1|SYP_GEOSF RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|221564782|gb|ACM20754.1| prolyl-tRNA synthetase [Geobacter sp. FRC-32]
          Length = 570

 Score =  146 bits (369), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 51/222 (22%), Positives = 90/222 (40%), Gaps = 11/222 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  +        ++E   H+ + R   +  +A    GV  +   G +  + + + +R +
Sbjct: 4   SQYFIPTVKETPSDAEVISHQLMLRGGMIRKLAA---GVYNYLPLGLRSIRKVENIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P V    LWQ+SG W+ Y   +   +   DT      F L P +     
Sbjct: 61  MNRAGAIELLMPTVQPAELWQESGRWEQYGKELLRFRDRKDT-----EFCLGPTHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    +KSYR+LP+ L +    +R+E      GLMR R F   DA+ F   E+  +   
Sbjct: 116 DLVRREVKSYRQLPINLYQIQGKFRDEIRPRF-GLMRGREFIMKDAYSFDVDEKAADISY 174

Query: 406 -KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
            K++     I++  G +   V+  T       S      AE+
Sbjct: 175 DKMYQAYRRIFERCGLKFRAVEADTGSIGGSWSHEFMVLAES 216



 Score = 86.8 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 67/163 (41%), Gaps = 12/163 (7%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGN 545
           R  + G +  +         A Y+++  ++    +I    +G  I R +   IE N   N
Sbjct: 403 RGIEVGHVFKLGTKYSKAMKATYLDADGKEQ---IIFMGCYGIGIGRTVAACIEQNHDEN 459

Query: 546 LPLWLSPIQAIVTTIT------SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
             ++  PI      I+          E ++ I   L +  + +  D R+E   +K ++  
Sbjct: 460 GIIFPLPIAPFHCIISALNMKEDVVREASEAIYGQLAAAGIEVLLDDRDERPGFKFKDAD 519

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +  IP+ I+ G K  ++  + ++   S   + +S+ DA+  + 
Sbjct: 520 LIGIPMRIVVGSKNLADGKVELKCRRSGEVELLSIADAVEKVK 562


>gi|312134482|ref|YP_004001820.1| prolyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
 gi|311774533|gb|ADQ04020.1| prolyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
          Length = 572

 Score =  146 bits (369), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 45/212 (21%), Positives = 97/212 (45%), Gaps = 11/212 (5%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
           +        ++E   H+ + R   +  ++   SG+  +   G+++ + + + +R ++   
Sbjct: 8   MPTLKETPSDAEIESHKLMLRSGFMRQLS---SGIYVYLPLGYRVLRKIENIVREEMDRS 64

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
             +E++   ++ + LW++SG W  +   MF +K  ++     R + L P +      +  
Sbjct: 65  GAQELHMSALMPKELWEESGRWAVFGPEMFRIKDRNE-----REYCLGPTHEEAFTYIVR 119

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIH 408
           + + SYRELP  L +  + +R+E      G+MR R FT  DA+ F   E+  +    K++
Sbjct: 120 NEITSYRELPKILYQIQTKFRDERRPRF-GVMRCREFTMKDAYSFDIDEKGLDISYQKMY 178

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           +  + I+K  G +  +V+  T       S   
Sbjct: 179 DAYVRIFKRCGLDVKIVEADTGAMGGASSHEF 210



 Score = 90.2 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 64/163 (39%), Gaps = 11/163 (6%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G I  +       F   Y +   EK   +M    +   I R    +IE       
Sbjct: 402 RGIEVGHIFKLGTKYTEAFGCVYTDEKGEKKLMIMGCYGI--GINRTAAAIIEQMHDEDG 459

Query: 546 --LPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              P+ ++P + IV  +     +  + A EI   L+ + + +  D R+E    K ++  +
Sbjct: 460 IIWPITVAPYEVIVVPVNIKDENQHKIAFEIYENLQKNGIEVLIDDRDERAGVKFKDADL 519

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             IP  +  G K  SE  + IR   +  T +V + +A+  +  
Sbjct: 520 IGIPFRVTVGKK-VSEGKLEIRNRRTKETFEVEIDNAVEFIMN 561


>gi|317060327|ref|ZP_07924812.1| prolyl-tRNA synthetase [Fusobacterium sp. D12]
 gi|313686003|gb|EFS22838.1| prolyl-tRNA synthetase [Fusobacterium sp. D12]
          Length = 569

 Score =  146 bits (369), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 54/244 (22%), Positives = 100/244 (40%), Gaps = 11/244 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  +       +E+E   H+ L R   +  +A   SG+  +   G++  + + + +R 
Sbjct: 3   FSKAYIKTLKETPKEAEIISHQLLLRAGMIKKLA---SGLYTYLPLGFRTLKKVENIIRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +E+  P +    LW++SG W+     M  +K      +  R F L P N    
Sbjct: 60  EMDRAGSQELLMPVLQPAELWRESGRWNVMGEEMVRLKD-----RHQRDFVLGPTNEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
             +  + + SY+ LP+ L    +  R+E      GLMR R F   DA+ F T  E +  E
Sbjct: 115 TDIVRNDISSYKSLPINLYHIQTKVRDERRPRF-GLMRSREFIMKDAYSFHTSQESLDEE 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              + N    I++  G +   V+  +      GS      AE+    ++ +   S    +
Sbjct: 174 FENMKNTYTRIFERCGLKFRPVEADSGAIGGSGSQEFHVLAESGEDEIIYSDGCSYAANV 233

Query: 464 NTGV 467
            T V
Sbjct: 234 ETAV 237



 Score = 84.4 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 37/162 (22%), Positives = 67/162 (41%), Gaps = 9/162 (5%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  +CG I  +         A Y++   E    +++     G        + +N+  N  
Sbjct: 405 RGIECGHIFKLGDKYSKALGASYLDEKGESKI-MLMGCYGIGVGRTMAAAIEQNYDENGI 463

Query: 548 LW---LSPIQAIVTT---ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W   L+P    V       +  ++ A+EI   L   HL    D R+E   +K ++  + 
Sbjct: 464 IWPTALAPYLVDVIPANIKNTEQMKLAEEIYENLNKEHLDAMIDDRDERPGFKFKDADLI 523

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             P  IICG K A+E  + ++   +  T +VS  + IP + +
Sbjct: 524 GFPFKIICGKK-AAENIVELKIRKTGETLEVSADEVIPTIKE 564


>gi|238784905|ref|ZP_04628905.1| Prolyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
 gi|238714222|gb|EEQ06234.1| Prolyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
          Length = 572

 Score =  146 bits (369), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 65/387 (16%), Positives = 125/387 (32%), Gaps = 46/387 (11%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGVRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E++ P V    LWQ+SG W+ Y   +       +     R F L P +    
Sbjct: 60  EMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGE-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLIRGEINSYKQLPLNFFQIQTKFRDEVRPRF-GVMRAREFLMKDAYSFHTTQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I++        V   T       S      AE+    ++ +  +     I
Sbjct: 174 YDAMYTAYSKIFERMDLNFRAVLADTGSIGGSASHEFQVLAESGEDDIVFSTDSDYAANI 233

Query: 464 NTGVLLGEGAFYGPKFE-----------------YILKDAIGRDWQCGTIQVDFNLPSRF 506
                L          E                    K  I +  +   +        + 
Sbjct: 234 EFAEALAPTEPRAAATEELRIIDTPNAKTIAQLVEQFKLPIEKTVKTLLVHAHEESGHKL 293

Query: 507 NAFYVNSHSE------KCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTI 560
            A  V    E      +  P +     F S E     +     G  P  L P+   +  +
Sbjct: 294 VALLVRGDHELNEIKAEKLPQVAKPLTFASEEEIRAAI-----GAGPGSLGPVNLPLLVV 348

Query: 561 TSSAVEYAQEIANLLKSHHLSIETDFR 587
                  A     ++         D +
Sbjct: 349 -------ADRSVAVMSDFGAGANIDDK 368



 Score = 83.7 bits (205), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 57/168 (33%), Gaps = 13/168 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           I R  + G I Q+         A             ++    +G  + R +   IE    
Sbjct: 405 IKRGIEVGHIFQLGTKYSEAMKATVQGEDG---RNQVMTMGCYGIGVSRVVAAAIEQNYD 461

Query: 545 N----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           N     P  ++P Q  +  +         E A+E+   L+SH + +  D R E       
Sbjct: 462 NRGIIWPDAIAPFQVAILPMNMHKSFRVKELAEELYVTLRSHGIDVILDDRKERPGVMFA 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  +  +P  I+ GD+      +  +   +   Q +   + I  L  +
Sbjct: 522 DMELIGVPHNIVIGDRNLDSEEVEYKHRRAGEKQMIKTSEIIDFLLSQ 569


>gi|302391162|ref|YP_003826982.1| prolyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
 gi|302203239|gb|ADL11917.1| prolyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
          Length = 569

 Score =  146 bits (369), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 44/220 (20%), Positives = 85/220 (38%), Gaps = 11/220 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q           ++E   H+ + R   +  +   GSG+      G+K+ Q +   +R +
Sbjct: 4   SQMYSPTLKETPADAEVVSHQLMLRAGLMRKL---GSGIYSHLPLGYKVIQKVEDIIREE 60

Query: 287 IK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E+  P +    LW++S  W  Y   +  ++      +  R F L P +     
Sbjct: 61  MNKAGAQEVLLPALQPAELWKESNRWADYGPELMRLED-----RHKRDFCLGPTHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +    ++SY++LP  L +  + +R+E       L R R F   DA+ F    E +    
Sbjct: 116 DLIKDEVRSYKDLPFNLYQIQTKFRDEIRPRFGVL-RSREFIMKDAYSFNPDKESLDESY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
            K+++  + I+   G +   V     P     S      A
Sbjct: 175 EKMYDSYVEIFDRCGLDFRTVVADNGPIGGTDSHEFMVLA 214



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/184 (13%), Positives = 60/184 (32%), Gaps = 12/184 (6%)

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIH 524
            +  GE     P  +   +  + R  + G +  +         A Y++ +  K   + + 
Sbjct: 386 EIKEGE-----PCIDCGAELTMTRGIEVGQVFKLGTKYSDSMKATYIDDNG-KSQSIFMG 439

Query: 525 RAVFGSIERFIGIMIENFKGNLPLWL---SPIQAIV--TTITSSAVEYAQEIANLLKSHH 579
               G        + +N      +W    +P    +            ++++   L    
Sbjct: 440 CYGIGVTRTVAAAIEQNHDDYGIIWPKSIAPYSVHIMQLGNDEEIKRVSEDLYTALNQTG 499

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
           L    D R+E    K  +  +   PI +I G     +  + I+   +    K++  + +P
Sbjct: 500 LEALYDDRSERAGVKFNDADLIGCPIQVIIGKNSLEDNKLEIKLRQTDEKLKINADNPVP 559

Query: 640 ILTK 643
            + +
Sbjct: 560 KIKE 563


>gi|297191728|ref|ZP_06909126.1| prolyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC 25486]
 gi|297151037|gb|EDY65325.2| prolyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC 25486]
          Length = 691

 Score =  146 bits (369), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 56/323 (17%), Positives = 123/323 (38%), Gaps = 21/323 (6%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++E   H+ L R   +     + +G+  W   G ++ + +   +R +
Sbjct: 135 SRLMVKTLRDDPADAETLSHKLLVRAGYVR---RNAAGIWSWLPLGKRVLENVTRVVREE 191

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E+  P +L +  ++ +G W+ Y A +F +K      +    + L P +     
Sbjct: 192 MDAIGAQEVLLPALLPKEPYEATGRWEEYGAELFRLKD-----RKGADYLLGPTHEEIFT 246

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +      SY++LPV L +  + YR+E      G++R R F   D++ F T ++   E  
Sbjct: 247 QLVKDQCTSYKDLPVILYQIQTKYRDEARPR-SGILRGREFQMKDSYSFDTSDEGLAESY 305

Query: 406 KIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA---ENIMKGVLDTIKNSSQD 461
            +H    + I++  G +  +V   +       S+     A   E+           ++ +
Sbjct: 306 ALHREAYVRIFERLGLKHKIVSAVSGAMGGSASEEFLAPAPAGEDTFVYCPSCDYAANTE 365

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
            +   +   EGA +GP  E    D      +     +     +      V    E     
Sbjct: 366 AVTFALAPVEGAEHGPVEELDTPDT--PTIETLADHLGVPASATLKNLLVKVDGE----- 418

Query: 522 MIHRAVFGSIERFIGIMIENFKG 544
           ++   V G+ E  +G + ++   
Sbjct: 419 IVAVGVPGNREVDLGKLGDHLAP 441



 Score = 84.8 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 63/164 (38%), Gaps = 12/164 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           + R  + G I Q+       F    +  + +   PV +    +G  + R +  + E    
Sbjct: 531 LDRAIEIGHIFQLGRKYADAFQLDVLGQNGK---PVRVTMGSYGVGVSRAVAALAEQTAD 587

Query: 545 NLPL-WL---SPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREH 598
              L W    +P    V     +   E A ++A  L +  L +  D R   +   K  + 
Sbjct: 588 EQGLCWPREIAPADVHVVAAGKALQTELALDVAEQLGAAGLRVLVDDRAGVSPGVKFTDA 647

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +  +P I++ G + A    + ++   +   +++++ DA+  L 
Sbjct: 648 ELIGVPKILVAGRRSAE-GVLELKDRRTGEREELTVADAVARLR 690


>gi|170718445|ref|YP_001783662.1| prolyl-tRNA synthetase [Haemophilus somnus 2336]
 gi|189083500|sp|B0UWK9|SYP_HAES2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|168826574|gb|ACA31945.1| prolyl-tRNA synthetase [Haemophilus somnus 2336]
          Length = 571

 Score =  146 bits (369), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 52/263 (19%), Positives = 103/263 (39%), Gaps = 11/263 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  L+       +++   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSKYLLSTLKETPNDAQVVSHQLMLRAGMIRPLA---SGLYNWLPTGLRVLKKVENIVRE 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LWQ+S  W+ Y   +       +     R F L P +    
Sbjct: 60  EMNKSGAIEVEMPVVQPAELWQESQRWEQYGPELLRFVDRGN-----RDFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT-KEQMFNE 403
             + +  + SY++LP+ L +  + +R+E      G+MR R F   DA+ F T KE + N 
Sbjct: 115 TDLVHREVSSYKQLPLNLYQIQTKFRDEVRPRF-GVMRGREFLMKDAYSFHTSKECLQNT 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++    +I+   G +   V+  T       S      A++    ++ +  +     I
Sbjct: 174 YDVMYRTYNNIFTRLGLDFRAVQADTGSIGGSASHEFQVLAKSGEDDIVFSSNSDYAANI 233

Query: 464 NTGVLLGEGAFYGPKFEYILKDA 486
                +  G    P     L D 
Sbjct: 234 ELAEAVAIGQRQAPSATMELVDT 256



 Score = 84.8 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 59/168 (35%), Gaps = 14/168 (8%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           I R  + G I Q+         A           P  +    +G  + R +   IE    
Sbjct: 403 IKRGIEVGHIFQLGTKYSEAMKATVQGEDG---RPQTMIMGCYGIGVSRVVAATIEQCHD 459

Query: 545 -NLPLW----LSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
               +W    ++P    +  +    + +   +A+E+   L + ++ +  D R E      
Sbjct: 460 EKGIIWSSDEIAPFTVAIIPMNMYKSKNVQIFAEELYQSLLNKNVDVIFDDRKERPGVMF 519

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +  +  +P +I+ G+K   +  I  +   +   Q ++    +  L +
Sbjct: 520 ADIELIGVPHMIVIGEKNLEKGEIEYKNRRTGEKQIIAKEQVLDFLAQ 567


>gi|319944615|ref|ZP_08018883.1| proline--tRNA ligase [Lautropia mirabilis ATCC 51599]
 gi|319742152|gb|EFV94571.1| proline--tRNA ligase [Lautropia mirabilis ATCC 51599]
          Length = 589

 Score =  146 bits (369), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 46/245 (18%), Positives = 91/245 (37%), Gaps = 11/245 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            T   L  +     ++E   H+ + R   +  +A    G+  +   G ++ + + + +R 
Sbjct: 3   ATALHLPTFKEAPADAEVVSHKLMTRAGMIRKLA---GGIYTYMPLGLRVIRRIEAIIRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P +    LW +SG W+ Y   +  ++      +  R F ++P +    
Sbjct: 60  EMDAAGAIELLMPVIQPAELWMESGRWEEYGPELLRIRD-----RHQRDFVIQPTSEEVV 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
             +    L+SYR+LP       + +R+E      G+MR R FT  DA+ F    E     
Sbjct: 115 TDLARQDLRSYRQLPKNFYHIQTKFRDERRPRF-GVMRGREFTMKDAYSFDRDSESALVS 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             K+ +    I+   G +   V   T       S      A+     ++ +  +     I
Sbjct: 174 YRKMFDAYHRIFDRLGLQYRAVAADTGSIGGSASHEFQVIADTGEDALVYSTGSDYAANI 233

Query: 464 NTGVL 468
                
Sbjct: 234 ELAEA 238



 Score = 86.4 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 34/176 (19%), Positives = 67/176 (38%), Gaps = 11/176 (6%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           P  +     AI R  + G +  +        NA +++ + +   P+ +     G   R +
Sbjct: 411 PSPDGQGTLAIQRGIEVGHVFYLGTKYSQAMNATFIDENGQSK-PLEMGCYGIGVT-RLL 468

Query: 536 GIMIE-NFKGNLPLWLS---PIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFR 587
           G  IE N      +W +   P + +V  +    + +  E    +A  L++  +    D R
Sbjct: 469 GAAIEQNHDDKGIIWPASIAPFEVVVCPMGLERSEAVREAVDRLAADLQAAGIRYVVDDR 528

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           NE       +  +  +P+ I  GD+   E  + +       T KV+  D +  + K
Sbjct: 529 NERPGVMFADWELIGVPLRITVGDRGLKEGLLELTVRRGMVTHKVAPADVLAEVQK 584


>gi|90580993|ref|ZP_01236794.1| prolyl-tRNA synthetase [Vibrio angustum S14]
 gi|90437871|gb|EAS63061.1| prolyl-tRNA synthetase [Vibrio angustum S14]
          Length = 571

 Score =  146 bits (369), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 51/264 (19%), Positives = 98/264 (37%), Gaps = 12/264 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +   L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R+
Sbjct: 3   TSNYLLSTLKETPNDAEVISHQLMLRAGMIRKLA---SGLYTWLPTGLRVLRKVENIVRQ 59

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           +I      E   P V    LW+++G  +     +        T +  R F L P      
Sbjct: 60  EIDNAGAIETLMPVVQPFELWEETGRSEKMGPELLRF-----TDRHTRPFVLSPTAEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
            ++  + + SY++LP+ L +  + +R+E      G+MR R F   DA+ F    E +   
Sbjct: 115 TSLVRNEVSSYKQLPLNLYQIQTKFRDERRPRF-GVMRAREFCMMDAYSFDIDKEGLQKS 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +H+     +   G E   V   +      GS      AE+    +  + ++     I
Sbjct: 174 YDAMHDAYCKAFDRMGLEYRPVWADSGAIGGNGSQEFHVLAESGEDLIAFSTESDYAANI 233

Query: 464 NTGVLLGEGAFYG-PKFEYILKDA 486
                L        P  E  + D 
Sbjct: 234 EKAEALAPAHDRAEPTIELSVIDT 257



 Score = 86.0 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 63/167 (37%), Gaps = 13/167 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           + R  + G I Q+      + N   ++++ +     ++    +G  + R +   IE    
Sbjct: 405 LKRGIEVGHIFQLGNAYSEKMNCGVLDANGKN---TILEMGCYGIGVSRVVASAIEQNHD 461

Query: 545 N----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                 P  L+P    +  +    +    E A+++   L +  + +  D R E       
Sbjct: 462 ENGIIWPDALAPFHVSIVPMNMAKSEEVKEAAEKLYADLTAAGIEVLFDDRKERPGVMFA 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +H +  +P  I+ G++      +  +   +   + V++ D +  L +
Sbjct: 522 DHELLGVPHTIVIGNRSLENGEMEYKNRRTGIKEAVAVNDVVAFLKQ 568


>gi|307609489|emb|CBW98986.1| prolyl-tRNA synthetase [Legionella pneumophila 130b]
          Length = 569

 Score =  146 bits (369), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 51/257 (19%), Positives = 99/257 (38%), Gaps = 27/257 (10%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L        ++E   H+ + R   +  +   GSG+  W   G ++ + + + +R 
Sbjct: 3   ASQWFLVTQKETPNDAEIASHQLMLRSGMIRKL---GSGLYTWMPLGLRVLRKVENIVRE 59

Query: 286 KIKDD-YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LWQ++G W+++   +  +K       + R +   P +    
Sbjct: 60  EMNKTHAMELLMPSVQPAELWQETGRWETFGGQLLTMKD-----SNQREYCFGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNE 403
             +  + L+SY++LPV   +  + +R+E      G+MR R F   DA+ F  + E +   
Sbjct: 115 TDIMRNELQSYKQLPVNFYQIQTKFRDEIRPRF-GVMRAREFIMKDAYSFHLSLESLQET 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   G +   V+  T       S      AE            S +D I
Sbjct: 174 YKDMYQAYCRIFDRMGLKYRAVEADTGAIGGSTSHEFQVLAE------------SGEDLI 221

Query: 464 NTGVLLGEGAFYGPKFE 480
                  + + Y    E
Sbjct: 222 FY----SDASDYAANIE 234



 Score = 85.2 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 65/163 (39%), Gaps = 9/163 (5%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G + Q+        NA  +N   +    +++     G        + ++   +  
Sbjct: 404 RGIEVGHVFQLGDKYAKAMNASVINEQGQLQT-MIMGCYGLGITRVVAAAIEQHHDEHGI 462

Query: 548 LW---LSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +W   L+P Q  +  +    + +  E A+ +   LKSH + +  D RNE       ++ +
Sbjct: 463 IWPQALAPFQVNIIPLNGARSQAVKEQAESLYQQLKSHGIDVLLDDRNERAGVLFADNDL 522

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             IP  ++  ++   +  I  +   S+ TQ ++L   +  + +
Sbjct: 523 IGIPHRLVVSERNLEQGCIEYKSRTSSETQLINLDKVVNFIIE 565


>gi|284048708|ref|YP_003399047.1| prolyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
 gi|283952929|gb|ADB47732.1| prolyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
          Length = 571

 Score =  146 bits (369), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 51/203 (25%), Positives = 84/203 (41%), Gaps = 11/203 (5%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQ 302
             H+ + R   +  +A    G+  +    W+  + +   +R ++     +EI  P V   
Sbjct: 21  ESHKLMLRAGYIRKVA---GGLYSYLPLAWRSLRKIEEIIREEMVPTGAQEIMMPIVQPS 77

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            +WQ+SG W +Y A MF +K      +  R F L P +      +    L+SYR+LPV L
Sbjct: 78  EIWQESGRWPAYGAEMFKLKD-----RHGRDFCLGPTHEELVTTLVRDDLRSYRQLPVTL 132

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFE 421
            +  S +R+E      GLMR R F   DA+ F    E +       ++    I+   G +
Sbjct: 133 YQIQSKFRDEKRPRF-GLMRSREFIMKDAYSFDKDAEGLDKSYQDEYDAYSRIFTRCGLD 191

Query: 422 KIMVKLSTRPEKRVGSDALWDDA 444
              V+  +      GS      A
Sbjct: 192 YRPVEADSGAIGGKGSHEFMALA 214



 Score = 78.7 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 34/176 (19%), Positives = 67/176 (38%), Gaps = 11/176 (6%)

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
            P  +  LK+A G +      +++       +A Y++    K HP+++     G   R +
Sbjct: 393 CPHCDGHLKEARGIEV-GQVFKLNTKYSEALHATYLDVDG-KEHPLVMGCYGIGV-GRTL 449

Query: 536 GIMIENFKGN----LPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRN 588
              IE         +P  ++P Q +V  +      + + A EI + L    +    D R+
Sbjct: 450 AAAIEQHHDKDGIIMPRNIAPYQVMVLAMNVKDEESWQKAVEIHDALNQAGIDTLLDDRD 509

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL-DAIPILTK 643
           E    K ++  +   P+ I+ G K     ++  +   +     VS   D I  +  
Sbjct: 510 ERAGVKFKDADLIGCPLRIVIGPKTMKRNAMETKLRCNGEMADVSFEGDWIQAIRD 565


>gi|195035421|ref|XP_001989176.1| GH11578 [Drosophila grimshawi]
 gi|193905176|gb|EDW04043.1| GH11578 [Drosophila grimshawi]
          Length = 245

 Score =  146 bits (369), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 46/133 (34%), Positives = 73/133 (54%), Gaps = 4/133 (3%)

Query: 5   IKLTFPDGS-IKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           IK+T PDG  +       T  DVA  IS+ LA   V   +NG+V DL   +  + S++++
Sbjct: 108 IKVTLPDGKQVDATAWETTPFDVASGISKGLADNTVISKVNGEVWDLDRVLEADCSLQLL 167

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQ 121
             +DP + AV  HS AHIM EA++ I+    +  GP IE GFYYD   + +  S+++   
Sbjct: 168 KFDDPDAQAVFWHSSAHIMGEAMERIYGGH-LCYGPPIESGFYYDMYLDGEGISTNDYGA 226

Query: 122 IEKKMQEIIARDS 134
           +E  +++I+    
Sbjct: 227 METLVKQIVKEKQ 239


>gi|67523387|ref|XP_659754.1| hypothetical protein AN2150.2 [Aspergillus nidulans FGSC A4]
 gi|40745038|gb|EAA64194.1| hypothetical protein AN2150.2 [Aspergillus nidulans FGSC A4]
 gi|259487529|tpe|CBF86275.1| TPA: prolyl-tRNA synthetase (AFU_orthologue; AFUA_2G16010)
           [Aspergillus nidulans FGSC A4]
          Length = 594

 Score =  146 bits (369), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 81/410 (19%), Positives = 150/410 (36%), Gaps = 67/410 (16%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRAN 317
            D SG        + I++ +  +  ++IK    +  + P  + + + Q +  H + + A 
Sbjct: 107 YDVSGCYILKPASYSIWEEIQQWFNQRIKKIGVKNCSFPLFVSEDVLQREKDHIEGFAAE 166

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           +  V  A  T  + +  A++P +       +   ++S+R+LP++L ++ SV R E     
Sbjct: 167 VAWVTHAGSTPLEKK-IAIRPTSETVMYPYYAKWIRSHRDLPLKLNQWNSVVRWEFK-HP 224

Query: 378 HGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
              +R R F   + H    TKE    E + I +L   IY++     ++    T  EK  G
Sbjct: 225 QPFLRTREFLWQEGHTAHLTKEAAHEEVMYILDLYAQIYEELLAVPVVKGQKTEKEKFAG 284

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
                                                 Y    E  +  A GR  Q GT 
Sbjct: 285 G------------------------------------LYTTTVEGYIP-ATGRGIQGGTS 307

Query: 497 Q-VDFNLPSRFNAFYVNSH---SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
             +  N    FN    +      EK  P+ + +  +G   R +G+M+     +  L L P
Sbjct: 308 HGLGQNFSKMFNITVEDPSAKGDEKKPPLHVWQNSWGLSTRTLGVMVMIHSDDNGLVLPP 367

Query: 553 I----QAIVTTIT--------SSAVEYAQ--EIANLLKSHHLSIETDFR-NETINYKIRE 597
                Q +V  +           A  YA+  +I   L +  +   +D R   +  +K  E
Sbjct: 368 RVAENQVVVVPVGITAKLTEEDRAKLYAEVDKITETLTAAGVRAISDKREGYSPGWKFNE 427

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRF---GSTTTQKVSLLD---AIPIL 641
             ++ +P+ I  G  E++   +   R    G      + + +   A+P L
Sbjct: 428 WELRGVPLRIEFGPGESAGNFVSTARRDIPGKDGKGTIPIPELSTAVPAL 477


>gi|330935397|ref|XP_003304947.1| hypothetical protein PTT_17681 [Pyrenophora teres f. teres 0-1]
 gi|311318137|gb|EFQ86884.1| hypothetical protein PTT_17681 [Pyrenophora teres f. teres 0-1]
          Length = 562

 Score =  146 bits (369), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 74/427 (17%), Positives = 146/427 (34%), Gaps = 67/427 (15%)

Query: 252 EMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSG 309
                    D +G        + I++ + ++   +IK         P  +     + +  
Sbjct: 67  TKGQMISYYDVAGCYILEPSSYAIWENIKTWFDAQIKTLKVRNAYFPIFISADNLEREKE 126

Query: 310 HWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVY 369
           H + + A +  V     +  +    A++P +       F   ++S+R+LP++L ++ +V 
Sbjct: 127 HVEGFAAEVAWVTKGGKSDLEK-PIAVRPTSETAMYPYFARKIQSHRDLPLKLNQWNNVV 185

Query: 370 RNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLS 428
           R E    +   +R R F   + H    T+E+   E L+I +    +Y++           
Sbjct: 186 RWEFKHPM-PFIRSREFLWQEGHTAHLTREEASAEVLQILDWYSDVYQNL---------- 234

Query: 429 TRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIG 488
                                     +         T      GA Y    E  +  A G
Sbjct: 235 --------------------------LAVPVVKGTKTVNEKFPGADYTTTIEGFIP-ATG 267

Query: 489 RDWQCGTIQVDFNLPSRFNAFYV----NSHSEKCHPVMIHRAVFGSIERFIGIMI----E 540
           R  Q  T        S+     V       + K   V + +  +G   R IG+MI    +
Sbjct: 268 RGIQAATSHCLGQHFSKMFNITVEDPTAKEAGKSEHVHVWQNSWGLTTRSIGVMILTHGD 327

Query: 541 NFKGNLPLWLSPIQAIVTTIT----------SSAVEYAQEIANLLKSHHLSIETDFR-NE 589
           N    +P  ++ IQ +V  +                  ++IA+ L    + +ETD+R   
Sbjct: 328 NRGLVIPPRVAEIQVVVIPVGVTAKMSAEAKEELYGKVKKIADDLTEAGVRVETDYREGY 387

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT----QKVSLLDAIPILTK-- 643
           +  +K  +  +K IP+ I  G K+A +  +   R            +++ +    + K  
Sbjct: 388 SPGWKFNDWELKGIPLRIEFGPKDAEKGVVTTSRRDIDDKDAARGTINVDNLANEVPKLL 447

Query: 644 ESLPPDC 650
           E +  D 
Sbjct: 448 EQIQEDM 454


>gi|54296718|ref|YP_123087.1| prolyl-tRNA synthetase [Legionella pneumophila str. Paris]
 gi|81822631|sp|Q5X756|SYP_LEGPA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|53750503|emb|CAH11897.1| Prolyl-tRNA synthetase (Proline--tRNA ligase)(ProRS)(Global RNA
           synthesis factor) [Legionella pneumophila str. Paris]
          Length = 569

 Score =  146 bits (369), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 51/257 (19%), Positives = 99/257 (38%), Gaps = 27/257 (10%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L        ++E   H+ + R   +  +   GSG+  W   G ++ + + + +R 
Sbjct: 3   ASQWFLVTQKETPNDAEIASHQLMLRSGMIRKL---GSGLYTWMPLGLRVLRKVENIVRE 59

Query: 286 KIKDD-YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LWQ++G W+++   +  +K       + R +   P +    
Sbjct: 60  EMNKTHAMELLMPSVQPAELWQETGRWETFGGQLLTMKD-----SNQREYCFGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNE 403
             +  + L+SY++LPV   +  + +R+E      G+MR R F   DA+ F  + E +   
Sbjct: 115 TDIMRNELQSYKQLPVNFYQIQTKFRDEIRPRF-GVMRAREFIMKDAYSFHLSLESLQET 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   G +   V+  T       S      AE            S +D I
Sbjct: 174 YKDMYQAYCRIFDRMGLKYRAVEADTGAIGGSASHEFQVLAE------------SGEDLI 221

Query: 464 NTGVLLGEGAFYGPKFE 480
                  + + Y    E
Sbjct: 222 FY----SDASDYAANIE 234



 Score = 84.8 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 65/163 (39%), Gaps = 9/163 (5%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G + Q+        NA  +N   +    +++     G        + ++   +  
Sbjct: 404 RGIEVGHVFQLGDKYAKAMNASVINEQGQLQT-MIMGCYGLGITRVVAAAIEQHHDEHGI 462

Query: 548 LW---LSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +W   L+P Q  +  +    + +  E A+ +   LKSH + +  D RNE       ++ +
Sbjct: 463 IWPQALAPFQVNIIPLNGARSQTVKEQAESLYQQLKSHGIDVLLDDRNERAGVLFADNDL 522

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             IP  ++  ++   +  I  +   S+ TQ ++L   +  + +
Sbjct: 523 IGIPHRLVVSERNLEQGCIEYKSRTSSETQLINLDKVVNFIIE 565


>gi|187479380|ref|YP_787405.1| prolyl-tRNA synthetase [Bordetella avium 197N]
 gi|114152173|sp|Q2KVA0|SYP_BORA1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|115423967|emb|CAJ50520.1| prolyl-tRNA synthetase [Bordetella avium 197N]
          Length = 576

 Score =  146 bits (369), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 46/217 (21%), Positives = 83/217 (38%), Gaps = 11/217 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +   +        ++E   H+ + R   +  +A    G+  +   G K+ + +   +R 
Sbjct: 3   ASNYHINTLKEAPADAEVASHQLMTRAGMIRKLA---GGIYSYMPLGLKVIRKVEHIIRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LWQ+SG W+ Y   +  +K      +  R F L+P +    
Sbjct: 60  EMNASGAIELLMPVVQPAELWQESGRWEQYGQELLRIKD-----RHQRDFVLQPTSEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + + SYR+LPV      + +R+E      G+MR R FT  DA+ F   E      
Sbjct: 115 TDIARNEIHSYRQLPVNFFHIQTKFRDERRPRF-GVMRGREFTMKDAYSFDRDEAGAGRS 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
              + +    I++  G     V   T       S   
Sbjct: 174 YDIMFDAYHRIFRRLGLAFRAVAADTGSIGGSRSHEF 210



 Score = 78.3 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 27/166 (16%), Positives = 67/166 (40%), Gaps = 13/166 (7%)

Query: 486 AIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFK 543
           AI R  + G +  +         A +++   +   P ++    +G  + R +G  IE   
Sbjct: 407 AIQRGIEVGHVFFLGTKYSEALKATFLDETGK---PALMQMGCYGIGVTRIVGAAIEQNF 463

Query: 544 GN----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            N     P  ++P + ++  +    + +    ++ +   L+   + +  D R+       
Sbjct: 464 DNRGIIWPRAIAPFEVVICPVGWGKSETVRNKSEALYQALREQGIDVILDDRDARPGVMF 523

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            E  +  +P+ +  GD+  ++  I ++    T T K+S+  A+  +
Sbjct: 524 AEWELIGVPLRVTIGDRGLNDGVIELQGRRDTETVKISVDSALKEI 569


>gi|54293678|ref|YP_126093.1| prolyl-tRNA synthetase [Legionella pneumophila str. Lens]
 gi|81822437|sp|Q5WYK5|SYP_LEGPL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|53753510|emb|CAH14965.1| Prolyl-tRNA synthetase (Proline--tRNA ligase)(ProRS)(Global RNA
           synthesis factor) [Legionella pneumophila str. Lens]
          Length = 569

 Score =  146 bits (369), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 51/257 (19%), Positives = 99/257 (38%), Gaps = 27/257 (10%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L        ++E   H+ + R   +  +   GSG+  W   G ++ + + + +R 
Sbjct: 3   ASQWFLVTQKETPNDAEIASHQLMLRSGMIRKL---GSGLYTWMPLGLRVLRKVENIVRE 59

Query: 286 KIKDD-YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LWQ++G W+++   +  +K       + R +   P +    
Sbjct: 60  EMNKTHAMELLMPSVQPAELWQETGRWETFGGQLLTMKD-----SNQREYCFGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNE 403
             +  + L+SY++LPV   +  + +R+E      G+MR R F   DA+ F  + E +   
Sbjct: 115 TDIMRNELQSYKQLPVNFYQIQTKFRDEIRPRF-GVMRAREFIMKDAYSFHLSLESLQET 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   G +   V+  T       S      AE            S +D I
Sbjct: 174 YKDMYQAYCRIFDRMGLKYRAVEADTGAIGGSASHEFQVLAE------------SGEDLI 221

Query: 464 NTGVLLGEGAFYGPKFE 480
                  + + Y    E
Sbjct: 222 FY----SDASDYAANIE 234



 Score = 84.8 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 65/163 (39%), Gaps = 9/163 (5%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G + Q+        NA  +N   +    +++     G        + ++   +  
Sbjct: 404 RGIEVGHVFQLGDKYAKAMNASVINEQGQLQT-MIMGCYGLGITRVVAAAIEQHHDEHGI 462

Query: 548 LW---LSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +W   L+P Q  +  +    + +  E A+ +   LKSH + +  D RNE       ++ +
Sbjct: 463 IWPQALAPFQVNIIPLNGARSHAVKEQAESLYQQLKSHGIDVLLDDRNERAGVLFADNDL 522

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             IP  ++  ++   +  I  +   S+ TQ ++L   +  + +
Sbjct: 523 IGIPHRLVVSERNLEQGCIEYKSRTSSETQLINLDKVVNFIIE 565


>gi|300783993|ref|YP_003764284.1| prolyl-tRNA synthetase [Amycolatopsis mediterranei U32]
 gi|299793507|gb|ADJ43882.1| prolyl-tRNA synthetase [Amycolatopsis mediterranei U32]
          Length = 582

 Score =  146 bits (369), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 64/363 (17%), Positives = 130/363 (35%), Gaps = 31/363 (8%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   HR L R   +  +A    G   W   G ++ + + + +R ++     +EI  P 
Sbjct: 19  DAEVPSHRLLVRAGYVRRVA---PGGYSWLPLGLRVLRRIEAVVREEMNAMGAQEIQFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++ +G W  Y   +F +K      +    + L P +             SYR+ 
Sbjct: 76  LLPREPYETTGRWTEYGDGLFRLKD-----RKGADYLLGPTHEELFALTVKGEYSSYRDY 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKD 417
           PV L +  + YR+E      G++R R F   D++ F   ++      + H    + ++  
Sbjct: 131 PVTLYQIQTKYRDEARPR-AGILRGREFVMKDSYSFDLDDEGLARSYQAHRDAYVKLFDR 189

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
            G E ++VK ++       S+     AE      + + ++     +   V     A   P
Sbjct: 190 LGLEYVVVKATSGAMGGSASEEFLAVAETGEDTYVRSTESGYAANVEAVVTPAPAAQ--P 247

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
             E   +  +       TI+   N  +        + ++    VM+     GS E  +  
Sbjct: 248 -IEGRPEAQVHHTPNTPTIESLVNFLNDAGLGRTFTAADTLKNVMLKTRQPGSAEWELVC 306

Query: 538 MI-----ENFKGNLPLWLSPIQAIVTTITSSAVEYAQE---IA-----NLLKSHHLSIET 584
           +      E     L   L P +  +        ++A+    +        L+ + +    
Sbjct: 307 VAVPGDREVDMKRLEASLEPAEVALL----DEADFAKNPFLVKGYIGPKALQDNGVRYLA 362

Query: 585 DFR 587
           D R
Sbjct: 363 DPR 365



 Score = 91.0 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 66/170 (38%), Gaps = 11/170 (6%)

Query: 484 KDAIGRDWQCGTIQVDFNLP---SRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMI 539
            D  G       I++           +AF V++      P+ I    +G  + R +G++ 
Sbjct: 410 PDGHGTLVAARGIEIGHIFQLGRKYTDAFEVDALGPDSKPIRITMGSYGVGVSRLVGVLA 469

Query: 540 ENFKGN----LPLWLSP--IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           E    +     P   SP  +  ++     +    A++IA  L +  + +  D R  T   
Sbjct: 470 EQNHDDLGLIWPRVASPFDVHIVIAGKDETIAAGAEKIAAELDAAGVEVILDDRKATPGV 529

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           K  +  +  +P I++ G +  +   + ++   S   +++++   +  L K
Sbjct: 530 KFADAELVGVPTILVVG-RGLANGVVEVKDRRSGEREEIAVEAVVEHLVK 578


>gi|262037473|ref|ZP_06010933.1| proline--tRNA ligase [Leptotrichia goodfellowii F0264]
 gi|261748508|gb|EEY35887.1| proline--tRNA ligase [Leptotrichia goodfellowii F0264]
          Length = 576

 Score =  146 bits (369), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 50/240 (20%), Positives = 104/240 (43%), Gaps = 11/240 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  L  Y    +E+E   H+ + R   +  +     GV  +   G+K+ + + + +R +
Sbjct: 10  SKAFLKTYKEAPKEAEIISHQLMLRASMIKQL---TRGVYSYLPLGYKVLRKIENIVREE 66

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +   + +EI+ P +    LW++SG W +Y   +  +K  ++     R FAL P +     
Sbjct: 67  MNRANAQEIHMPVLQPASLWEESGRWFAYGPELMRLKDRNE-----REFALGPTHEEVVT 121

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN-EC 404
            +  + + SY++LP  L +  + +R+E      GLMR R F   DA+ F   ++  + E 
Sbjct: 122 DIVRNMVSSYKDLPFNLYQIQTKFRDEMRPRF-GLMRGREFLMKDAYSFHIDQKSLDEEY 180

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
           L + +    ++   G +   V+  +       S      A++    +L +  +     I 
Sbjct: 181 LNMKSAYERVFIRCGLDFRAVEADSGSIGGDSSHEFMVLADSGEDDILYSDVSGYAANIE 240



 Score = 75.2 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 62/165 (37%), Gaps = 10/165 (6%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPL 548
           R  + G I    +  S+     V   + K   + +     G        + +N      +
Sbjct: 413 RGIEVGHIFKLGDKYSKALNATVLDENGKQQIIAMGCYGIGISRVMAAAIEQNHDEFGII 472

Query: 549 WL---SP--IQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
           W    +P  +  I+  I         +++   L  + +    D RNE   +K ++  +  
Sbjct: 473 WPKNIAPYLVDVIIANIKDEAQFSLGEKLYKELCDNGIETVLDDRNERAGFKFKDADLIG 532

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKV---SLLDAIPILTKE 644
           IP+ I+ G K A+E  + I+   +  +++V    + D +    +E
Sbjct: 533 IPLKIVVG-KGAAEGKVEIKDRRTGESREVKAEEVTDFVRRFIEE 576


>gi|313672947|ref|YP_004051058.1| prolyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM 19672]
 gi|312939703|gb|ADR18895.1| prolyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM 19672]
          Length = 572

 Score =  146 bits (368), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 46/221 (20%), Positives = 93/221 (42%), Gaps = 11/221 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++E   H+ + R   +  +A    G+  +   G ++ + + + +R+ 
Sbjct: 4   SKYFVPTLRENPSDAEVVSHKLMVRAGMIRKVAA---GIYNYLPMGLRVIRKVENIIRKY 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           + +    EI  P V+   LW++SG W+ Y   +   K   D     R F + P +     
Sbjct: 61  MNEAGAIEILMPAVVPAELWKESGRWNVYGKELLRFKDRHD-----RDFCMGPTHEEVVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +  + +KSY++LPV L +  + +R+E      GLMR R F   DA+ F   ++   +  
Sbjct: 116 DIVRNEIKSYKDLPVNLYQIQTKFRDEVRPRF-GLMRGREFIMKDAYSFDVDDEGAEKSY 174

Query: 406 KIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
            +       I++  G +  +V+  +       S      AE
Sbjct: 175 GLMRDAYCKIFESCGLKYKVVEADSGAIGGNFSHEFMVTAE 215



 Score = 80.2 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 22/152 (14%), Positives = 52/152 (34%), Gaps = 7/152 (4%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL---SPIQ 554
           +        NA Y++   ++ + +++     G        + +N      +W    +P +
Sbjct: 412 LGTKYSKSMNATYLDKDGKQQY-IVMGCYGIGVGRTAAAAIEQNHDEKGIIWPIQIAPFE 470

Query: 555 AIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
            ++  I       V  ++ +   L   ++ +  D RNE    K  +  +   PI +  G 
Sbjct: 471 VVIIPINTDDEDVVNLSETLYKKLLKKNVEVIIDDRNERAGVKFNDADLVGYPIRVNIGK 530

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           K      + I    +         DA+  + +
Sbjct: 531 KTLENGEVEIVIRKTGDKINCKKDDALSEILR 562


>gi|193216459|ref|YP_001999701.1| prolyl-tRNA synthetase [Mycoplasma arthritidis 158L3-1]
 gi|193001782|gb|ACF06997.1| prolyl-tRNA synthetase [Mycoplasma arthritidis 158L3-1]
          Length = 476

 Score =  146 bits (368), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 70/421 (16%), Positives = 145/421 (34%), Gaps = 59/421 (14%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
            +E   + +  + +  DL         +  +    + I+  +      K K+ D   +  
Sbjct: 10  QQEDFAKWYTDVIKNGDLMAYGSSKGAI-IFKPLSFGIWDNIRKIADEKFKEKDVANVYL 68

Query: 297 PQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P ++ + L  ++  H + +   +  V       K    F ++P +       F + ++S+
Sbjct: 69  PLLIPEGLLQKEKDHLEGFNPELATVTEVGGK-KLAEKFFIRPTSEVLFADFFRNEIESH 127

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE-CLKIHNLIISI 414
            +LP+   ++ +V R E   + +  +R R F   + H          +   ++ N+ I +
Sbjct: 128 NDLPLIYNQWVNVLRWEK--TTNPFLRTREFLWQEGHTMHANSAEAIKLTYEMLNVYIDL 185

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            +++    ++    T  EK  G+D                                    
Sbjct: 186 VQNYLAIPVIAGNKTEHEKFSGAD------------------------------------ 209

Query: 475 YGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           +    E ++KD  G+  Q GT      N    F   + N ++E+      +   +G   R
Sbjct: 210 FTLTIEAMMKD--GKALQSGTSHYLAQNFTKAFEIAFKNKNNEQE---FAYGTSWGISTR 264

Query: 534 FIGIMIENFKGN----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETD 585
            +G +I     +    +P  ++P+Q  +  I         E A EI   L     +++ D
Sbjct: 265 LLGALIMTHGDDRGIIIPPKIAPVQIDIIEILAKKDPKVHEVALEITKKLNKV-FAVKLD 323

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
             +++  +K     I   P+ I  G  +     +   R        V L D I    KE 
Sbjct: 324 DSDKSPGFKAANSEIHGTPLRIEVGPNDLINNQVTFVRRDKIEKISVPL-DKIEARAKEI 382

Query: 646 L 646
           L
Sbjct: 383 L 383


>gi|329925255|ref|ZP_08280198.1| proline--tRNA ligase [Paenibacillus sp. HGF5]
 gi|328940088|gb|EGG36421.1| proline--tRNA ligase [Paenibacillus sp. HGF5]
          Length = 575

 Score =  146 bits (368), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 49/213 (23%), Positives = 89/213 (41%), Gaps = 11/213 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  +T       E+E   H+ + R   +   A    G+  +   GW++ + + + +R++
Sbjct: 4   SQLLMTTMRDVPSEAEALSHQWMLRGGYIRQTAA---GIYSYLPLGWRVLRKIEAIIRQE 60

Query: 287 IK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E+  P V    LW++SG +D Y A +  +    D     R F L P +     
Sbjct: 61  MDSAGGQELLMPAVQPAELWKESGRYDVYGAELIRLHDRHD-----REFVLGPTHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           ++    + SYR+LPV L +  S YR+E      GL+R R F   DA+ F       +   
Sbjct: 116 SIVRQEISSYRKLPVNLYQIQSKYRDERRPRF-GLLRGREFLMKDAYSFDRDWGGLDASY 174

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGS 437
           + ++     I++  G     V+         G 
Sbjct: 175 RNMYETYERIFRRCGLMFRAVEADAGAIGGQGE 207



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 63/167 (37%), Gaps = 12/167 (7%)

Query: 487 IGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE----N 541
             R  + G +  +        N  Y+++   +  P+++     G   R +  + E    +
Sbjct: 408 FHRGIELGHVFKLGTKYSDAMNGKYLDADG-REKPLIMGCYGIGVS-RVMAAIAEQRISD 465

Query: 542 FKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
            +   P+ ++P +  +  +     + ++ A+ I   L    L    D R+E    K ++ 
Sbjct: 466 GRLVWPMSVAPFKVHIIPVAVKDETQMQLAEHIYRELSGAGLEPLLDDRDERAGVKFKDA 525

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
            +   P+ II G + A+   +            + + +AI    +E+
Sbjct: 526 DLAGAPLRIIVG-RGAASGEVEWMGEDGIKI-SLPVEEAIQRSREEA 570


>gi|257453020|ref|ZP_05618319.1| prolyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|257467420|ref|ZP_05631731.1| prolyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
          Length = 593

 Score =  146 bits (368), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 54/244 (22%), Positives = 100/244 (40%), Gaps = 11/244 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  +       +E+E   H+ L R   +  +A   SG+  +   G++  + + + +R 
Sbjct: 27  FSKAYIKTLKETPKEAEIISHQLLLRAGMIKKLA---SGLYTYLPLGFRTLKKVENIIRE 83

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +E+  P +    LWQ+SG W+     M  +K      +  R F L P N    
Sbjct: 84  EMDRAGSQELLMPVLQPAELWQESGRWNVMGEEMVRLKD-----RHQRDFVLGPTNEEVI 138

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
             +  + + SY+ LP+ L    +  R+E      GLMR R F   DA+ F T  E +  E
Sbjct: 139 TDIVRNDISSYKSLPINLYHIQTKVRDERRPRF-GLMRSREFIMKDAYSFHTSQESLDEE 197

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              + N    I++  G +   V+  +      GS      AE+    ++ +   S    +
Sbjct: 198 FENMKNTYTRIFERCGLKFRPVEADSGAIGGSGSQEFHVLAESGEDEIIYSDGCSYAANV 257

Query: 464 NTGV 467
            T +
Sbjct: 258 ETAI 261



 Score = 82.5 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/162 (19%), Positives = 66/162 (40%), Gaps = 9/162 (5%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  +CG I  +         A Y++   E    +++     G        + +N+  +  
Sbjct: 429 RGIECGHIFKLGDKYSKALGASYLDEKGESKI-MLMGCYGIGVGRTMAAAIEQNYDEHGI 487

Query: 548 LW---LSPIQAIVTT---ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W   L+P    V       +  ++ A++I   L + HL    D R+E   +K ++  + 
Sbjct: 488 IWPSALAPYLVDVIPANIKNAEQMQLAEKIYEQLNAEHLDAMLDDRDERPGFKFKDADLI 547

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             P  +ICG K A+E  + ++   +  T ++ + + I  +  
Sbjct: 548 GFPFKVICGKK-AAENIVELKIRKTGETFEIPVDEIISKIKD 588


>gi|238759923|ref|ZP_04621077.1| Prolyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
 gi|238701830|gb|EEP94393.1| Prolyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
          Length = 572

 Score =  146 bits (368), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 50/251 (19%), Positives = 97/251 (38%), Gaps = 15/251 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTQKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGVRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E++ P V    LWQ+SG W+ Y   +       +     R F L P +    
Sbjct: 60  EMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGE-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLIRGEINSYKQLPLNFFQIQTKFRDEVRPRF-GVMRAREFLMKDAYSFHTTQESLQET 173

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG---SDALWDDAENIMKGVLDTIKNSSQD 461
                   S  K F    +  +        +G   S      AE+    ++ + ++    
Sbjct: 174 YDAMYTAYS--KIFARMDLNFRAVLADTGSIGGSASHEFQVLAESGEDDIVFSTESDYAA 231

Query: 462 RINTGVLLGEG 472
            I     L   
Sbjct: 232 NIEFAEALAPS 242



 Score = 85.2 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 55/168 (32%), Gaps = 13/168 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           I R  + G I Q+         A             ++    +G  + R +   IE    
Sbjct: 405 IKRGIEVGHIFQLGTKYSEAMKATVQGEDG---RNQVMTMGCYGIGVSRVVAAAIEQNYD 461

Query: 545 N----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                 P  ++P Q  +  +         E A+E+   L+SH + +  D R E       
Sbjct: 462 ERGIIWPDAIAPFQVAILPMNMHKSFRVKELAEELYATLRSHGIDVILDDRKERPGVMFA 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  +  +P  I+ GD+      +  +       Q +   + I  L  +
Sbjct: 522 DMELIGVPHNIVIGDRNLDSEEVEYKNRRIGEKQMIKTSEIIEFLLSQ 569


>gi|119511594|ref|ZP_01630701.1| prolyl-tRNA synthetase [Nodularia spumigena CCY9414]
 gi|119463755|gb|EAW44685.1| prolyl-tRNA synthetase [Nodularia spumigena CCY9414]
          Length = 602

 Score =  146 bits (368), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 58/266 (21%), Positives = 103/266 (38%), Gaps = 8/266 (3%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q           ++E   H+ L R   +  I   GSG+  +    W++ Q +   +R +
Sbjct: 4   SQMLFVTLRDDPADAEIPSHKLLLRAGYIRRI---GSGIYAYLPLMWRVLQKVSQIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +   + +E   PQ+    LW++SG WD+Y      +    D  +  +   L P +     
Sbjct: 61  MNATNAQECLLPQLQPAELWKESGRWDTYTKAEGIMFSLID--RREQQLGLGPTHEEVIT 118

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            V    ++SYR+LP+ L +  + +R+E      GLMR R F   D + F   E    E  
Sbjct: 119 TVARDMIRSYRQLPLHLYQIQTKFRDEIRPRF-GLMRGREFIMKDGYSFHVDEVSLKETY 177

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
           + ++    ++ +  G     V+  +      GS      A+     VL T        + 
Sbjct: 178 QDMYQAYSNMLRRSGLAFRAVEADSGAIGGSGSTEFMVLADAGEDEVLYTEDGKYAANVE 237

Query: 465 TGVLLGEGAFYGPKFEYILKDAIGRD 490
             V L   A   P   Y  ++  G +
Sbjct: 238 KAVSLASDAEVSPFTSYEKRETPGTE 263



 Score = 89.5 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/181 (19%), Positives = 72/181 (39%), Gaps = 11/181 (6%)

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
            G+ A + P  E  L+ A G +      Q+        +A Y N   E  +P+ +     
Sbjct: 419 PGDRAVHDP--EQTLQTARGIEV-GHIFQLGTKYSQAMSATYTNEQGE-ENPLFMGCYGV 474

Query: 529 GSIERFIGIMIENFKGNLPLWL---SPIQAIV-TTITSS--AVEYAQEIANLLKSHHLSI 582
           G        + +++  +  +W    +P  AIV          VE AQ++   L    +  
Sbjct: 475 GVSRLAQSAVEQSYDKDGIIWPVAIAPYHAIVTIPNIKDAQQVEIAQKLYTQLNKAGVET 534

Query: 583 ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             D R+E    K ++  +  IP  I+ G +  +   + + +  +  TQ++++ + +  L 
Sbjct: 535 LLDDRDERAGVKFKDADLIGIPYRIVTG-RAINNGKVEVVKRATRETQEIAIEEVVNTLQ 593

Query: 643 K 643
           +
Sbjct: 594 Q 594


>gi|295696152|ref|YP_003589390.1| prolyl-tRNA synthetase [Bacillus tusciae DSM 2912]
 gi|295411754|gb|ADG06246.1| prolyl-tRNA synthetase [Bacillus tusciae DSM 2912]
          Length = 567

 Score =  146 bits (368), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 49/225 (21%), Positives = 93/225 (41%), Gaps = 12/225 (5%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
           +        E+E   HR + R   +  +    SGV  +   G+++ + + + +R ++   
Sbjct: 8   VQTLREVPAEAEVPSHRLMLRAGMIRQV---VSGVYSYLPLGYRVLRKIEAIVREEMDRA 64

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
             +E+  P V    LWQ+SG WD Y   +   +      +  R   L P +      +  
Sbjct: 65  GAQEVLLPAVQPASLWQESGRWDDYGKELLRFED-----RHQRMLVLGPTHEEVITDLVR 119

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IH 408
             ++SYR+LP+ L +  + +R+E      G+MR R F   DA+ F   E+  +   + ++
Sbjct: 120 TEVRSYRQLPMTLYQIQTKFRDEVRPRF-GVMRAREFIMKDAYSFDVDEEGLDRSYRAMY 178

Query: 409 NLIISIYKDFGFEKIMVKLSTR-PEKRVGSDALWDDAENIMKGVL 452
                I++  G E  +V+          GS      +E     +L
Sbjct: 179 QAYEQIFRRCGLEFRVVQADPGAIGGEGGSHEFMVLSEVGEDTIL 223



 Score = 87.9 bits (216), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 70/196 (35%), Gaps = 21/196 (10%)

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGT-------------IQVDFNLPSRFNAFYVNS 513
           V+ G    +  + +     A  R  +CG               ++        +A +++ 
Sbjct: 369 VVPGRDFNWDSRGDIRTARAGDRCVRCGAPLEEYRGIEVGHVFKLGTKYSEALSASFLDE 428

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL---SPIQAIVTTIT---SSAVEY 567
                 PV++     G        + ++      +W    +P    V  +    ++  + 
Sbjct: 429 RGV-QRPVIMGCYGIGVSRLIAAAVEQHHDDKGIMWPMPIAPFHVHVLPVNLKDAAQRDA 487

Query: 568 AQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGST 627
           A+++   L+   + +  D R+E    K  +  +  IPI +I G +  SE  + ++R  + 
Sbjct: 488 AEQLCTRLEDAGIEVLLDDRDERPGVKFNDADLMGIPIQLIVGKR-ISEGLVEMKRRKTG 546

Query: 628 TTQKVSLLDAIPILTK 643
               +S  +A+    +
Sbjct: 547 EVTLLSPDEAVRAAVE 562


>gi|221632630|ref|YP_002521851.1| prolyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
 gi|221156093|gb|ACM05220.1| prolyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
          Length = 484

 Score =  146 bits (368), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 64/435 (14%), Positives = 151/435 (34%), Gaps = 59/435 (13%)

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR 284
             T ++  + L   E+   R + ++ ++ +L   +      +     G+ +++ + + + 
Sbjct: 1   MTTDRKYVEELIEQEDDFDRWYVEVIQKAELADESPVRGTRVI-RPYGFALWENMQAELD 59

Query: 285 RKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
           R+IK    +    P  + +   + ++ H   +   +  V    D   +    A++P +  
Sbjct: 60  RRIKATGVQNAYFPLFIPKSFLEREAEHIKGFAPEVAWVTRGGDKELE-EWLAVRPTSES 118

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMF 401
               +F   ++SYR+LP+ + ++ SV R E        +R   F   + H    T E+  
Sbjct: 119 IICPMFARWVQSYRDLPILINQWCSVVRWEERP--RAFLRTLEFLWQEGHTVHATLEEAE 176

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
                +  +     +      ++    T  EK  G+   +          ++ +      
Sbjct: 177 ERARLMLEVYRDFVESELAIPVIPGQKTESEKFAGALRTYT---------IEAMMGGKHW 227

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
            + +      G  +G  F+    D  G+                                
Sbjct: 228 ALQSATSHNLGDHFGKVFDITFLDREGKRRYVFN-------------------------- 261

Query: 522 MIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSS------AVEYAQEI 571
                 +G   R IG M+    ++    LP  ++PIQ ++  I           E    +
Sbjct: 262 ----TSWGLSHRTIGAMVMVHGDDRGLKLPPRVAPIQVVIVPIWRKDEERRQVEETVDRV 317

Query: 572 ANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS-TTT 629
             +L+   + +  D R++ T  +K  +  +K +PI +  G ++ +   + + R       
Sbjct: 318 RAMLRRA-VRVHADLRDDKTPGWKFNDWDLKGVPIRLEIGPRDVASDQVTLVRRDVLGQR 376

Query: 630 QKVSLLDAIPILTKE 644
           Q V + + +  +  E
Sbjct: 377 QAVPIANLVGAVQSE 391


>gi|117925064|ref|YP_865681.1| prolyl-tRNA synthetase [Magnetococcus sp. MC-1]
 gi|152112926|sp|A0L8I2|SYP_MAGSM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|117608820|gb|ABK44275.1| prolyl-tRNA synthetase [Magnetococcus sp. MC-1]
          Length = 576

 Score =  146 bits (368), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 42/223 (18%), Positives = 89/223 (39%), Gaps = 11/223 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  +        E++   H+ + R   +  +   G+G+  W   G K+ + + + +R+
Sbjct: 3   FSQTLIPTLKEEPSEAQVISHKLMLRAGLIRQL---GAGIYTWLPMGLKVLRKVETIVRQ 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +E+  P +    LW++SG W  Y   +  +     T +  R+F   P +    
Sbjct: 60  EMDRAGAQEVLMPSIQPAELWEESGRWKMYGKELLRI-----TDRHNRSFCYGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP    +  + +R+E      G+MR R F   DA+ F   E   ++ 
Sbjct: 115 SDLVRREIHSYKQLPANFYQIQTKFRDEVRPRF-GIMRGREFLMKDAYSFDIDEAALDKS 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
            + +      I+     +   V+  T       S      A++
Sbjct: 174 YRLMFEAYNKIFNRLDLKFRPVEADTGAIGGASSHEFHVLAQS 216



 Score = 84.4 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 63/165 (38%), Gaps = 10/165 (6%)

Query: 487 IGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           + R  + G +  + +          ++    K  P+++     G   R +   IE     
Sbjct: 406 LSRGIEVGHVFKLGYKYSEAMGVKVLDEDG-KEKPLIMGCYGIGVS-RIVAAAIEQNHDE 463

Query: 546 ----LPLWLSPIQAIVTTITS---SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
                PL ++P +  V  +      A+E A+EI   L++  L +  D R+E    K ++ 
Sbjct: 464 NGIIWPLAIAPFEVEVVVMNPNESDAMEKAEEITAQLQAGQLEVLLDDRDERAGSKFKDA 523

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +   P  ++ G +   E    ++   S   +K+ +   +  L +
Sbjct: 524 DLLGAPYRVLVGGRAFKEGVCEVKNRRSGVVEKIPVESVVETLLQ 568


>gi|29829188|ref|NP_823822.1| prolyl-tRNA synthetase [Streptomyces avermitilis MA-4680]
 gi|81838431|sp|Q82JV8|SYP2_STRAW RecName: Full=Prolyl-tRNA synthetase 2; AltName: Full=Proline--tRNA
           ligase 2; Short=ProRS 2
 gi|29606294|dbj|BAC70357.1| putative prolyl-tRNA synthetase [Streptomyces avermitilis MA-4680]
          Length = 471

 Score =  146 bits (368), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 63/398 (15%), Positives = 148/398 (37%), Gaps = 55/398 (13%)

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
            R ++ L  + +L         ++     G+ +++ +   M  +IK+   +    P ++ 
Sbjct: 15  PRWYQDLINKAELADNGPVRGTMVI-RPYGYGLWERMQQEMDARIKETGTQNAYFPLLIP 73

Query: 302 QHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           Q    +++ H + +   +  V        +     ++P +       F+  ++SYR+LP+
Sbjct: 74  QSYLTKEADHVEGFAPELAVVTHGGGKELE-EPAVVRPTSEMIINDYFSKWVQSYRDLPL 132

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
            + ++ +V R E    L   +R   F   + H                       +DF  
Sbjct: 133 LINQWANVVRWELRPRL--FLRTTEFLWQEGHTAHAT--------------YEEARDFAA 176

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
                  +             D  EN++   +   + ++++R         GA      E
Sbjct: 177 HIHRHVYA-------------DFMENVLAMDVVLGRKTAKERF-------AGAVNTLTLE 216

Query: 481 YILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
            ++ D  G+  Q GT   +  N    F+  Y++   ++    ++ +  +GS  R IG ++
Sbjct: 217 GMMGD--GKALQMGTSHELGQNFARAFHTQYLSKEGKQE---LVWQTSWGSTTRMIGALV 271

Query: 540 ----ENFKGNLPLWLSPIQAIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETI-N 592
               ++    +P  L+  Q +V  I    + +   +E  + LK+  L ++ D R +    
Sbjct: 272 MMHGDDNGLRVPPRLAQTQVVVLAIKGDEAVLAKVRETGDRLKAAGLRVQVDDRTDVPFG 331

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRF--GSTT 628
            +  +  +K +P+ +  G ++    +  + R   G   
Sbjct: 332 RRAVDWELKGVPVRVEVGPRDLENGTAMVARRIPGGKE 369


>gi|310779485|ref|YP_003967818.1| prolyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
 gi|309748808|gb|ADO83470.1| prolyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
          Length = 570

 Score =  146 bits (368), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 53/252 (21%), Positives = 101/252 (40%), Gaps = 11/252 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +   +       +++E   H+ + R   +  +A   SGV  +   G+K  + +   +R 
Sbjct: 3   FSNLYVKTLKETPKDAEVISHKLMLRAGMIKKLA---SGVYTYLPLGYKALRKVEKIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           +++    +EI  P +    +WQ+SG WD+    M  +K   D     R F L P +    
Sbjct: 60  EMERAGSQEIFMPVLQPSEIWQESGRWDTMGPEMMRIKDRHD-----REFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNE 403
             +  + + SY+ LP+ L +  + +R+E      GLMR R F   DA+ F  ++E + NE
Sbjct: 115 TDIVRNDISSYKSLPMNLYQIQTKFRDERRPRF-GLMRSREFLMKDAYSFHASEECLDNE 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +      I++  G +   V+  +      GS      AE+    ++          +
Sbjct: 174 FENMKAAYTRIFERCGLKFRSVEADSGAIGGSGSQEFHVLAESGEDEIIYCDSCGYAANL 233

Query: 464 NTGVLLGEGAFY 475
                +     Y
Sbjct: 234 EKAESVAFIPEY 245



 Score = 71.7 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 63/174 (36%), Gaps = 9/174 (5%)

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
            P+    L  A G +      ++         A +++ +  K + +M+     G      
Sbjct: 395 CPRCSGTLSSARGIE-TGHVFKLGTKYSESMKATFLDVNG-KSNVMMMGCYGIGVSRTTA 452

Query: 536 GIMIENFKGNLPLWLSPIQAIVT------TITSSAVEYAQEIANLLKSHHLSIETDFRNE 589
             + +N+  N  +W S I   V             V   ++I   L    +    D RNE
Sbjct: 453 AAIEQNYDENGIIWPSAIAPYVVDVVPANMKNKDQVALGEKIYTELLEAGIDTVLDDRNE 512

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              +K ++  +   P  ++ G K+A+E  I I+   +  T  V   + +  + +
Sbjct: 513 RPGFKFKDADLIGFPFKVVSG-KQAAEGIIEIKIRKTGETLDVKSEEVVTTIKE 565


>gi|161723258|ref|YP_094730.2| prolyl-tRNA synthetase [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
 gi|114152207|sp|Q5ZXN7|SYP_LEGPH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
          Length = 569

 Score =  146 bits (368), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 51/257 (19%), Positives = 99/257 (38%), Gaps = 27/257 (10%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L        ++E   H+ + R   +  +   GSG+  W   G ++ + + + +R 
Sbjct: 3   ASQWFLVTQKETPNDAEIASHQLMLRSGMIRKL---GSGLYTWMPLGLRVLRKVENIVRE 59

Query: 286 KIKDD-YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LWQ++G W+++   +  +K       + R +   P +    
Sbjct: 60  EMNKTHAMELLMPSVQPAELWQETGRWETFGGQLLTMKD-----SNQREYCFGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNE 403
             +  + L+SY++LPV   +  + +R+E      G+MR R F   DA+ F  + E +   
Sbjct: 115 TDIMRNELQSYKQLPVNFYQIQTKFRDEIRPRF-GVMRAREFIMKDAYSFHLSLESLQET 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   G +   V+  T       S      AE            S +D I
Sbjct: 174 YKDMYQAYCRIFDRMGLKYRAVEADTGAIGGSASHEFQVLAE------------SGEDLI 221

Query: 464 NTGVLLGEGAFYGPKFE 480
                  + + Y    E
Sbjct: 222 FY----SDASDYAANIE 234



 Score = 85.2 bits (209), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 65/163 (39%), Gaps = 9/163 (5%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G + Q+        NA  +N   +    +++     G        + ++   +  
Sbjct: 404 RGIEVGHVFQLGDKYAKAMNASVINEQGQLQT-MIMGCYGLGITRVVAAAIEQHHDEHGI 462

Query: 548 LW---LSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +W   L+P Q  +  +    + +  E A+ +   LKSH + +  D RNE       ++ +
Sbjct: 463 IWPQALAPFQVNIIPLNGARSQAVKEQAESLYQQLKSHGIDVLLDDRNERAGVLFADNDL 522

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             IP  ++  ++   +  +  +   S+ TQ ++L   +  + +
Sbjct: 523 IGIPHRLVVSERNLEQGCVEYKARISSETQLINLDKVVNFIIE 565


>gi|123443459|ref|YP_001007432.1| prolyl-tRNA synthetase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|332160618|ref|YP_004297195.1| prolyl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica
           105.5R(r)]
 gi|152112962|sp|A1JP53|SYP_YERE8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|122090420|emb|CAL13288.1| prolyl-tRNA synthetase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|318606904|emb|CBY28402.1| prolyl-tRNA synthetase; Bacterial type [Yersinia enterocolitica
           subsp. palearctica Y11]
 gi|325664848|gb|ADZ41492.1| prolyl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica
           105.5R(r)]
 gi|330860908|emb|CBX71188.1| prolyl-tRNA synthetase [Yersinia enterocolitica W22703]
          Length = 572

 Score =  146 bits (368), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 49/250 (19%), Positives = 98/250 (39%), Gaps = 11/250 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGVRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E++ P V    LWQ+SG W+ Y   +       +     R F L P +    
Sbjct: 60  EMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGE-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLIRGEINSYKQLPLNFFQIQTKFRDEVRPRF-GVMRAREFLMKDAYSFHTTQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I++        V   T       S      A++    ++ + ++     I
Sbjct: 174 YDAMYAAYSKIFERMDLNFRAVLADTGSIGGSASHEFQVLADSGEDDIVFSTESDYAANI 233

Query: 464 NTGVLLGEGA 473
                L   A
Sbjct: 234 EFAEALAPSA 243



 Score = 85.2 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 55/168 (32%), Gaps = 13/168 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           I R  + G I Q+         A             ++    +G  + R +   IE    
Sbjct: 405 IKRGIEVGHIFQLGTKYSEAMKATVQGEDG---RNQVMTMGCYGIGVSRVVAAAIEQNHD 461

Query: 545 N----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                 P  ++P Q  +  +           A+E+   L+SH + +  D R E       
Sbjct: 462 ERGIIWPDAIAPFQVAILPMNMHKSFRVQALAEELYATLRSHGIDVILDDRKERPGVMFA 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  +  +P  I+ GD+      +  +   +   Q +   + I  L  +
Sbjct: 522 DMELIGVPHNIVIGDRNLDSEEVEYKNRRAGEKQMIKTSEIIDFLLSQ 569


>gi|124265710|ref|YP_001019714.1| prolyl-tRNA synthetase [Methylibium petroleiphilum PM1]
 gi|152112930|sp|A2SD40|SYP_METPP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|124258485|gb|ABM93479.1| prolyl-tRNA synthetase [Methylibium petroleiphilum PM1]
          Length = 581

 Score =  146 bits (368), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 61/326 (18%), Positives = 115/326 (35%), Gaps = 13/326 (3%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       ++E   H+ + R   +  +   G+G+  +   G ++ + + + +R 
Sbjct: 3   ASQFFVSTLKEAPADAEITSHKLMMRAGMIKRL---GAGIYSYMPMGLRVIRKVEAIIRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LWQ++G ++     +  VK   D     R F ++P +    
Sbjct: 60  EMNRAGAVELLMPVVQPAELWQETGRFEKMGPELMRVKDRHD-----RDFIIQPTSEEVV 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    L+SYR+LP       + +R+E      G+MR R FT  DA+ F   E      
Sbjct: 115 TDIARQELRSYRQLPKNFYHIQTKFRDERRPRF-GVMRGREFTMKDAYSFDRDEAAAGRS 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+  FG     V   T       S      AE     ++    +     I
Sbjct: 174 YDAMYAAYGRIFDRFGLSYRAVAADTGAIGGDRSHEFQVIAETGEDAIVYCPTSDYAANI 233

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLP--SRFNAFYVNSHSEKCHPV 521
                L   A      + + K        C  +    NLP      +  + +        
Sbjct: 234 ELAECLPLAAQRPVPIQPLTKTPTPGKATCADVAALLNLPLTQTVKSLVLATDDRNDGGD 293

Query: 522 MIHRAVFGSIERFIGIMIENFKGNLP 547
           ++   V+  + R    + E   G LP
Sbjct: 294 IVKTTVWLLLVRGDHELNEVKAGKLP 319



 Score = 80.6 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 23/155 (14%), Positives = 56/155 (36%), Gaps = 9/155 (5%)

Query: 497 QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN----LPLWLS 551
            V +       A       E   P ++    +G  + R +G  IE          P  ++
Sbjct: 422 HVFYLGTKYSAAMNATYLDETGKPRLMEMGCYGIGVTRILGAAIEQRHDARGIVWPTAIA 481

Query: 552 PIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIII 607
           P + ++  I    ++   + A  + + L++  + +  D R E       +  +  IP  +
Sbjct: 482 PFEVVICPIGYDRSAEVRQAADTLHDELQALGMDLMLDDRGERPGAMFADWELIGIPQRV 541

Query: 608 ICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +  D+   E  + ++        K+++ + +  L 
Sbjct: 542 VISDRGLKEGQVELQGRQEAEAGKLAVAEVVAQLR 576


>gi|88810462|ref|ZP_01125719.1| prolyl-tRNA synthetase [Nitrococcus mobilis Nb-231]
 gi|88792092|gb|EAR23202.1| prolyl-tRNA synthetase [Nitrococcus mobilis Nb-231]
          Length = 569

 Score =  146 bits (368), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 48/220 (21%), Positives = 85/220 (38%), Gaps = 11/220 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           T   L        ++E   H+ + R      IA  G+G+  W   G ++ + +   +R +
Sbjct: 4   TGFPLFTSREIPADAEIISHQLMLRAG---LIARLGAGLYTWLPLGLRVLRNVERVVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P V    LWQ+SG W+ Y   +  +K      +  R F   P +     
Sbjct: 61  MDRIGSLEVLMPAVQPAELWQESGRWEQYGPELLRLKD-----RHAREFCFGPTHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    + SYR+LPV   +  + +R+E      G+MR R F   DA+ F   +       
Sbjct: 116 DLVRREIHSYRQLPVTYYQIQTKFRDEIRPRF-GVMRAREFLMKDAYSFHLDQASLEATY 174

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
           + +H     I++    +   V+  T       S+     A
Sbjct: 175 RAMHAAYSRIFQRLNLDFRAVRADTGAIGGSVSEEFHVLA 214



 Score = 79.1 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 28/165 (16%), Positives = 60/165 (36%), Gaps = 9/165 (5%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           I R  + G + Q+        +A  +N H ++  P+++     G        + +N    
Sbjct: 401 IKRGIEVGHVFQLGAKYSESMDARVLNEHGDQV-PMIMGCYGIGVSRVVAAAIEQNHDER 459

Query: 546 LPLW---LSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
             +W   L+P Q  + +I    + +    A+ +   L +  L    D R      K  + 
Sbjct: 460 GIIWPTPLAPFQVAIVSINAHRSEAVHNEAERLHEALGAAGLEPLWDDREARPGVKFADM 519

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +  IP  ++  D+  S  ++  R     T++ +     +  L  
Sbjct: 520 ELIGIPHRLVISDRGLSAGTVEYRGRSEPTSRHLPCERVVEFLRD 564


>gi|86606966|ref|YP_475729.1| prolyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
 gi|114152267|sp|Q2JSB6|SYP_SYNJA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|86555508|gb|ABD00466.1| prolyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
          Length = 609

 Score =  146 bits (368), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 56/268 (20%), Positives = 101/268 (37%), Gaps = 10/268 (3%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q           E+E   H+ L R   +  ++    G+  +    W++ Q +   +R +
Sbjct: 8   SQMLFVTLREDPAEAELISHKLLLRGGFIRRLS---PGIYTYLPLLWRVLQKISDIVREE 64

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E   PQ+    +W++SG WD Y      +    D  +  R  AL P +     
Sbjct: 65  MNAIGAQECLLPQLQPAEIWRESGRWDVYTQAEGIMFALKD--RQGREQALGPTHEEVIT 122

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    ++SYR+LP  L +  + +R+E      GL+R R F   DA+ F   E+   +  
Sbjct: 123 LLARDLIRSYRQLPQILYQIQTKFRDEIRPRF-GLLRGREFLMKDAYSFHANEESLRQTY 181

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPE--KRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
           + ++     I +  G E  +V+            S      A      +L T   S    
Sbjct: 182 QDMYRAYGRILRRCGLEFCVVEADAGAIGGPSAASQEFMVLASAGEDEILYTPDGSYAAN 241

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRD 490
           +   V L   A   P   + + D  G +
Sbjct: 242 VEKAVSLPPPAADSPYTTFQVLDTPGTE 269



 Score = 72.1 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 20/162 (12%), Positives = 53/162 (32%), Gaps = 9/162 (5%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I Q+         A + +    +  P+ +     G        + ++   N  
Sbjct: 440 RGIEIGHIFQLGLKFSLPMRASFTDEQGSEQ-PLWMGCYGIGVSRLAQAAVEQSHDANGI 498

Query: 548 LWLSPIQAIVT------TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W   I                  + A+++   L +  +    D R+E    K ++  + 
Sbjct: 499 IWPVAIAPYHVVVVVPNVSDPEQTKVAEKLVQELAAAGIETLWDDRDERAGVKFKDADLI 558

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            IP  +  G +   +  + +    +    ++ + + +  L +
Sbjct: 559 GIPYRLTTG-RSLKQGKVELAERATGQAVEIPIEEVVATLKE 599


>gi|22298319|ref|NP_681566.1| prolyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
 gi|81844949|sp|Q8DKT0|SYP_THEEB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|22294498|dbj|BAC08328.1| proline-tRNA ligase [Thermosynechococcus elongatus BP-1]
          Length = 602

 Score =  146 bits (368), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 64/303 (21%), Positives = 109/303 (35%), Gaps = 11/303 (3%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q           E+E   H+ L R   +  IA   SG+  +    W++ Q + + +R +
Sbjct: 4   SQMLFVTLRDEPAEAEIPSHKLLLRAGYIRRIA---SGIYSYLPLMWRVLQKVSAIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E   PQ+    LWQ+SG WD+Y      +     T +  R   L P +     
Sbjct: 61  MNRSGALECLLPQLQPAELWQESGRWDTYTKAEGIMFSL--TDRAQRQLGLGPTHEEVIT 118

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           A+    ++SYR+LPV L +  + +R+E      GLMR R F   D + F        E  
Sbjct: 119 ALAKDLIRSYRQLPVHLYQIQTKFRDEIRPRF-GLMRGREFIMKDGYSFHADVASLKETY 177

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
           + +++    I +  G     V+  +      GS      A      VL T        + 
Sbjct: 178 QVMYDTYSRILQRCGLTFRAVEADSGAIGGSGSHEFMVLAAAGEDEVLYTADGQYAANVE 237

Query: 465 TGV-LLGEGAFYGPKFEYIL--KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
             V L  +      K    L   +A   D     +Q       +   +     + +   V
Sbjct: 238 KAVSLPPDAVPTTYKTVATLDTPNAATIDALVEQLQCHPTQIVKNVLYRAVFDNGRVGLV 297

Query: 522 MIH 524
           ++ 
Sbjct: 298 LVS 300



 Score = 92.5 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 62/163 (38%), Gaps = 9/163 (5%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I Q+         A Y N   E+  P+++     G        + ++      
Sbjct: 435 RGIEIGHIFQLGTKYSEAMKATYTNEQGEEV-PLVMGCYGIGISRLAQAAVEQHHDAQGI 493

Query: 548 LWL---SPIQAIVTT---ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W    +P Q I+       +  ++ A ++   L++  + +  D R+E    K ++  + 
Sbjct: 494 VWPLAIAPYQVIIVVPNIGDAQQMQAATDLYEQLQAAGIEVLLDDRDERAGVKFKDADLI 553

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            IP  ++ G +  +   + +    +     + L + +  L KE
Sbjct: 554 GIPYRLVTG-RAIANGEVELIIRATGAKSTLPLTEVVRYLQKE 595


>gi|52628042|gb|AAU26783.1| prolyl-tRNA synthase [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
          Length = 589

 Score =  146 bits (368), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 51/257 (19%), Positives = 99/257 (38%), Gaps = 27/257 (10%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L        ++E   H+ + R   +  +   GSG+  W   G ++ + + + +R 
Sbjct: 23  ASQWFLVTQKETPNDAEIASHQLMLRSGMIRKL---GSGLYTWMPLGLRVLRKVENIVRE 79

Query: 286 KIKDD-YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LWQ++G W+++   +  +K       + R +   P +    
Sbjct: 80  EMNKTHAMELLMPSVQPAELWQETGRWETFGGQLLTMKD-----SNQREYCFGPTHEEVI 134

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNE 403
             +  + L+SY++LPV   +  + +R+E      G+MR R F   DA+ F  + E +   
Sbjct: 135 TDIMRNELQSYKQLPVNFYQIQTKFRDEIRPRF-GVMRAREFIMKDAYSFHLSLESLQET 193

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   G +   V+  T       S      AE            S +D I
Sbjct: 194 YKDMYQAYCRIFDRMGLKYRAVEADTGAIGGSASHEFQVLAE------------SGEDLI 241

Query: 464 NTGVLLGEGAFYGPKFE 480
                  + + Y    E
Sbjct: 242 FY----SDASDYAANIE 254



 Score = 84.8 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 65/163 (39%), Gaps = 9/163 (5%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G + Q+        NA  +N   +    +++     G        + ++   +  
Sbjct: 424 RGIEVGHVFQLGDKYAKAMNASVINEQGQLQT-MIMGCYGLGITRVVAAAIEQHHDEHGI 482

Query: 548 LW---LSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +W   L+P Q  +  +    + +  E A+ +   LKSH + +  D RNE       ++ +
Sbjct: 483 IWPQALAPFQVNIIPLNGARSQAVKEQAESLYQQLKSHGIDVLLDDRNERAGVLFADNDL 542

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             IP  ++  ++   +  +  +   S+ TQ ++L   +  + +
Sbjct: 543 IGIPHRLVVSERNLEQGCVEYKARISSETQLINLDKVVNFIIE 585


>gi|291613215|ref|YP_003523372.1| prolyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1]
 gi|291583327|gb|ADE10985.1| prolyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1]
          Length = 566

 Score =  146 bits (368), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 50/254 (19%), Positives = 96/254 (37%), Gaps = 11/254 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  ++       E+E   HR + R   +  ++   SG+  W   G ++ + + + +R +
Sbjct: 4   SQFFISTLKEAPSEAELPSHRLMLRAGYIRKLS---SGLYTWMPLGLRVLRKVEAVVREE 60

Query: 287 IK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P V    LWQ++G WD +   M  +K   D +     F   P +     
Sbjct: 61  MNKSGGIELLMPAVQPAELWQETGRWDVFGPQMLKIKDRHDNL-----FCFGPTHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +    +KSYR+LP+   +  + +R+E      G+MR R F   DA+ F +  E +    
Sbjct: 116 DIARREVKSYRQLPLNFYQIQTKFRDEVRPRF-GVMRAREFVMKDAYSFHSSFESLEQTY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
             ++     I+   G +   V   T      GS      A++    +     +     + 
Sbjct: 175 RVMYETYTRIFTRLGLQFRAVAADTGAIGGSGSHEFHVLADSGEDALAFCPNSDYAANVE 234

Query: 465 TGVLLGEGAFYGPK 478
               +       P 
Sbjct: 235 LAEAVAPATARAPA 248



 Score = 91.8 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 63/164 (38%), Gaps = 13/164 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGNL 546
           R  + G I Q+         A Y++ + +     ++    +G  + R +   IE      
Sbjct: 403 RGIEVGHIFQLRTKYSEALQATYLDENGKAQ---VMEMGCYGIGVSRIVAAAIEQNFDER 459

Query: 547 PLWL----SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
            + L    +P Q  +  I    + +    A+++   L +  + +  D R+E       + 
Sbjct: 460 GIALPSGMAPFQVAIAPIGIKKSEAVRNAAEQLYAELTAAGVEVLLDDRDERPGVMFADL 519

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +  +P  I+ GD+   E  +  +     T Q + L DA+ ++ 
Sbjct: 520 ELIGVPHRIVIGDRGLKEGKVEYQGRKDETAQSIPLQDAVKLVQ 563


>gi|212213390|ref|YP_002304326.1| prolyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
 gi|212011800|gb|ACJ19181.1| prolyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
          Length = 566

 Score =  146 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 49/222 (22%), Positives = 86/222 (38%), Gaps = 11/222 (4%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
            H+ + R   L  +A   SG+  W   G ++ Q +   +R ++      E+  P V    
Sbjct: 24  SHQLMIRAGMLRKLA---SGLYTWLPLGLRVLQKVADVVREEMNRAGALELLMPIVQPAS 80

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LWQ+SG W++Y A +  +       +    F   P +      +    LKSY++LP+   
Sbjct: 81  LWQESGRWEAYGAELLRIMD-----RHQNGFCFGPTHEEVITDIARQELKSYKQLPLNFY 135

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFEK 422
           +  + +R+E      G+MR R F   DA+ F   E+       K+ +    I+   G   
Sbjct: 136 QIQTKFRDEIRPRF-GVMRSREFLMKDAYSFDLDEKGMQAAYEKMFDAYRRIFTRLGLNF 194

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
             V   T       S      A+     V+ + ++     I 
Sbjct: 195 RAVLADTGAIGGDYSHEFQVLADVGEDTVVYSDESDYAANIE 236



 Score = 68.7 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 22/161 (13%), Positives = 48/161 (29%), Gaps = 7/161 (4%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPL 548
           R  + G +    +  SR     V     K   + +     G        + +N      +
Sbjct: 406 RGIEVGQVFQLGDKYSRQMNATVVDELGKSRYLQMGCYGIGVSRTVAAAIEQNHDERGII 465

Query: 549 WLSPIQAIVTTITS-------SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           W +P+      +            E  +++ N L      +  D R E       +  + 
Sbjct: 466 WPTPMAPFFIALVPVNMHKSYRVREACEKLYNELIDAGYEVLWDDRKERPGVMFADMDLI 525

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            IP  ++  +       +  +   S   + VSL + + +  
Sbjct: 526 GIPHRLVISESGLDRGIVEYKARKSKEAENVSLENVLSVFR 566


>gi|167517909|ref|XP_001743295.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163778394|gb|EDQ92009.1| predicted protein [Monosiga brevicollis MX1]
          Length = 421

 Score =  146 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 72/399 (18%), Positives = 150/399 (37%), Gaps = 27/399 (6%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
           +IA+  SG+        ++   L + +R ++     +EI+   +  + LW  SG WD+  
Sbjct: 13  YIAQSSSGMYHMLPLAKRVLGKLENLVRAEMSAIGAQEISLSTLTGKDLWTHSGRWDTVS 72

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
           + +F V+      +    + L P +      +    ++S R +P+ L +    YR+E   
Sbjct: 73  SELFRVED-----RRGAVYCLAPTHEEAITTLAKSYVRSARNMPLYLYQLDRKYRDELRP 127

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              GL+R R F   D + F   EQ      + +     +++       + V+  T     
Sbjct: 128 R-SGLLRGREFYMKDLYTFDVDEQAARLTYESVVKAYHNLFTHLHVPYVAVEADTGAIGG 186

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
             S      A      V  T+ ++     N  V+ G  A   P       D    +   G
Sbjct: 187 SMSHEFQVLAPVGEDSV--TVCHTCDRAANLEVMPGSEAGTTP---VAPTDHCQFESHAG 241

Query: 495 T-IQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG-SIERFIGIMIE----NFKGNLPL 548
             +   F L  ++++ +  ++     P +     +G    R +  + E          PL
Sbjct: 242 IEVGHTFLLGHKYSSMFDVTYDSPSGPELAFMGCYGLGTSRILAAVTEALASENGLRWPL 301

Query: 549 WLSPIQAIVTTITSSAVEYAQEIA----NLLKSHHL-SIETDFR--NETINYKIREHSIK 601
            L+P +  V T+ +S  +  +  A      L       +  D R  + ++  KI    + 
Sbjct: 302 SLAPYRVAVITLGASRNDNIESAATCLTEQLNEAMPGDVLLDDRCVDLSLRQKIATMRLI 361

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
            +P +++ G +  + R + +    +   +K+++ D I +
Sbjct: 362 GVPYVVVVGSR-YNARQLEVYDSHNEAPRKIAVHDLIQL 399


>gi|189083494|sp|A9KGU5|SYP_COXBN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
          Length = 564

 Score =  146 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 49/222 (22%), Positives = 86/222 (38%), Gaps = 11/222 (4%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
            H+ + R   L  +A   SG+  W   G ++ Q +   +R ++      E+  P V    
Sbjct: 22  SHQLMIRAGMLRKLA---SGLYTWLPLGLRVLQKVADVVREEMNRAGALELLMPIVQPAS 78

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LWQ+SG W++Y A +  +       +    F   P +      +    LKSY++LP+   
Sbjct: 79  LWQESGRWEAYGAELLRIMD-----RHQNGFCFGPTHEEVITDIARQELKSYKQLPLNFY 133

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFEK 422
           +  + +R+E      G+MR R F   DA+ F   E+       K+ +    I+   G   
Sbjct: 134 QIQTKFRDEIRPRF-GVMRSREFLMKDAYSFDLDEKGMQAAYEKMFDAYRRIFTRLGLNF 192

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
             V   T       S      A+     V+ + ++     I 
Sbjct: 193 RAVLADTGAIGGDYSHEFQVLADVGEDTVVYSDESDYAANIE 234



 Score = 68.7 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 23/162 (14%), Positives = 51/162 (31%), Gaps = 9/162 (5%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G + Q+      + NA  V+   +  +  M      G        + +N      
Sbjct: 404 RGIEVGQVFQLGDKYSRKMNATVVDELGKSRYLQM-GCYGIGVSRTVAAAIEQNHDERGI 462

Query: 548 LWLSPIQAIVTTITS-------SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +W +P+      +            E  +++ N L      +  D R E       +  +
Sbjct: 463 IWPTPMAPFFIALVPVNMHKSYRVREACEKLYNELIDAGYEVLWDDRKERPGVMFADMDL 522

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             IP  ++  +       +  +   S   + VSL + + +  
Sbjct: 523 IGIPHRLVISESGLDRGIVEYKARKSKEAENVSLENVLSVFR 564


>gi|94265181|ref|ZP_01288943.1| Prolyl-tRNA synthetase [delta proteobacterium MLMS-1]
 gi|93454322|gb|EAT04629.1| Prolyl-tRNA synthetase [delta proteobacterium MLMS-1]
          Length = 572

 Score =  146 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 48/221 (21%), Positives = 83/221 (37%), Gaps = 11/221 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L        E+E   H+ + R   +  +    SGV  +   G    + +   +R+
Sbjct: 3   FSQLLLPTLKEDPAEAEVISHKLMLRAGMIRKL---TSGVYSYLPLGLAAIRKVEEIVRQ 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +E+  P V    LW++SG W+ Y   +   +      +  R   L P +    
Sbjct: 60  EMNRAGAQELLLPMVQPADLWRESGRWEKYGPELLRFQD-----RHQRESCLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SYR+LP+ L +  + +R+E      GLMR R F   D + F   E   +E 
Sbjct: 115 TDLVRLNVHSYRDLPLNLYQIQTKFRDEIRPRF-GLMRGREFIMKDGYSFDADEAAADET 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
             K+      I+   G     V+  T       S      A
Sbjct: 174 YRKMQAAYQRIFARCGLAFRAVEADTGSIGGSFSHEFMVLA 214



 Score = 90.2 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 44/172 (25%), Positives = 74/172 (43%), Gaps = 15/172 (8%)

Query: 489 RDWQCGTIQVDFNLPSR-FNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN- 545
           R  + G I    N  SR  NA +++   +  H +M     FG  + R +   IE      
Sbjct: 402 RGIEVGHIFKLGNEYSRALNATFLDKEGQSRHFIM---GCFGIGVSRTVAAAIEQNHDRD 458

Query: 546 ---LPLWLSPIQAIVTTITSSAVEY---AQEIANLLKSHHLSIETDFRNETINYKIREHS 599
               PL ++P Q I+  +T    E    AQ +   L +  L +  D RNE    K ++  
Sbjct: 459 GIIFPLPIAPFQVILLNLTPKDPEISAEAQRLYQELTAAGLEVLLDDRNERPGAKFKDAD 518

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK---ESLPP 648
           +  IPI ++ G + A E  + IR      + + +   A+ ++T+   + LPP
Sbjct: 519 LIGIPIRLMVGKRFAQEGLLEIRNRADGRSSEATPAAAVAVITEMVAQQLPP 570


>gi|325266259|ref|ZP_08132938.1| proline--tRNA ligase [Kingella denitrificans ATCC 33394]
 gi|324982221|gb|EGC17854.1| proline--tRNA ligase [Kingella denitrificans ATCC 33394]
          Length = 569

 Score =  146 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 44/223 (19%), Positives = 82/223 (36%), Gaps = 11/223 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       E+    H+ + R      I  + SG+  W   G ++ + + + +R 
Sbjct: 3   ASQFFISTLKEAPAEAALPSHKLMLRAG---LIKANASGLYTWMPMGLRVLRKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P +    LW++SG WD Y   +  +    D       F   P      
Sbjct: 60  EMNRAGAIELLMPVIQPADLWKESGRWDFYGDELLRITDRHDN-----EFCFSPTCEEMV 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP       + +R+E      G+MR R F   DA+ F        E 
Sbjct: 115 TDIVRKEVNSYKQLPKNFYHIQTKFRDERRPRF-GVMRAREFVMKDAYSFHADFASLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
            + +++    ++   G     V   T      GS      AE+
Sbjct: 174 YQAMYDAYCRVFGRLGLNFRPVAADTGSIGGTGSHEFQVLAES 216



 Score = 82.5 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/166 (18%), Positives = 69/166 (41%), Gaps = 13/166 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGN 545
           R  + G + Q+     +  NA +++++ +     ++    +G  I R +   IE N    
Sbjct: 405 RGIEVGHVFQLRDKYSAALNASFLDNNGKSQ---IMEMGCYGIGITRVVAAAIEQNHDER 461

Query: 546 LPLW---LSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
             +W   ++P  A++  +    + +  E A +I   L +  + +  D R+E     + + 
Sbjct: 462 GIIWTDTMAPFAAVIVPMNYKKSEAVREAADKIYADLLAAGVDVLLDDRDERAGVLLADS 521

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            +  IP  I+ GD+   E ++   R   +  Q V + D    +  +
Sbjct: 522 ELLGIPHRIVIGDRGLKEGNVEYARRTDSEAQSVPVGDIAAHVAAQ 567


>gi|304315915|ref|YP_003851060.1| prolyl-tRNA synthetase [Thermoanaerobacterium thermosaccharolyticum
           DSM 571]
 gi|302777417|gb|ADL67976.1| prolyl-tRNA synthetase [Thermoanaerobacterium thermosaccharolyticum
           DSM 571]
          Length = 570

 Score =  146 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 47/216 (21%), Positives = 93/216 (43%), Gaps = 11/216 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  +        E+E   H  + +   +  +A   SGV  +   G ++ + +   +R +
Sbjct: 4   SQLLIPTLREVPAEAEIPSHTLMLKAAMMRKLA---SGVYIYLPLGKRVLKKIEEIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E+  P ++   L ++SG WD +   MF +K  +D     R F L P +     
Sbjct: 61  MDRAGAQEVLMPAIIPAELLKESGRWDVFGPEMFKLKDRND-----REFCLGPTHEEVFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +  + +KSYR+LP+ + +  + YR+E      G+MR R F   DA+ F    + +    
Sbjct: 116 DLVRNEVKSYRQLPLTIYQIQTKYRDERRPRF-GVMRSREFIMKDAYSFDVDWDGLDASF 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            K+++    I+   G +  +V+  +       S   
Sbjct: 175 DKMYDAYCRIFDRCGLKYTVVEADSGAMGGKDSKEF 210



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/162 (16%), Positives = 61/162 (37%), Gaps = 9/162 (5%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I  +         A Y++ +  +  P+++     G        + +N      
Sbjct: 405 RGIEVGHIFKLGTKYSDALGANYIDENGNEK-PMIMGCYGIGLNRIAAAAIEQNHDDKGI 463

Query: 548 LWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W    +P  AIV  +     +    A++I + L    +    D R+     K  +  + 
Sbjct: 464 IWPMSIAPYHAIVVPVNVSNDAQRNLAEKIYDELSKAGIETLIDDRDLRAGVKFNDADLL 523

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            IPI I  G K AS+  + ++      + +++  + +  + +
Sbjct: 524 GIPIRITVGKK-ASDNIVELKLRRDENSIELNYDEVVNKVKE 564


>gi|320352952|ref|YP_004194291.1| prolyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
 gi|320121454|gb|ADW17000.1| prolyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
          Length = 570

 Score =  146 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 53/221 (23%), Positives = 88/221 (39%), Gaps = 11/221 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  L        E+E   H+ L R   +  +    SG+  +   G+   Q +   +R++
Sbjct: 4   SQMLLPTTKETPSEAEVVSHQLLVRGGFIRKL---TSGMYTYLPMGFLALQKVTEIVRQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +EI  P V    LW++SG W  Y   +   +   D     R + L P +     
Sbjct: 61  MNRAGAQEILMPMVQPGDLWEESGRWKKYGPELLRFRDRHD-----RDYCLGPTHEEVVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            V    L+SYR+LP+ L +  + +R+E      GLMR R F   DA+ F   +   +   
Sbjct: 116 DVARRELQSYRQLPINLYQIQTKFRDEIRPRF-GLMRGREFVMKDAYSFDVDDAGASRSY 174

Query: 406 KIH-NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
           +I       I++  G E   V+  +       S      AE
Sbjct: 175 EIMRQAYHRIFERCGLEFRAVEADSGAIGGSFSHEFMVLAE 215



 Score =  104 bits (258), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 33/153 (21%), Positives = 59/153 (38%), Gaps = 9/153 (5%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPI 553
           +         A + +S  ++  P ++     G   R +   IE          P+ L+P 
Sbjct: 413 LGTKYSEAMKANFQDSDGQEK-PFVMGCYGIGVS-RVVAAAIEQNHDAKGIIFPVPLAPF 470

Query: 554 QAIVTTITSSAVEY---AQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           Q IV  +      Y   A+++   L++  L +  D R+E    K  +  +  IP  +  G
Sbjct: 471 QVIVLNLGPKDEGYCTAAEDLYTQLRAQGLDVLLDDRDERPGSKFADADLLGIPYRLTVG 530

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
                E  + IR   +  TQ +SL +A   L +
Sbjct: 531 KTFEKEGKVEIRSRKTGETQVLSLEEATAYLAE 563


>gi|297530568|ref|YP_003671843.1| prolyl-tRNA synthetase [Geobacillus sp. C56-T3]
 gi|297253820|gb|ADI27266.1| prolyl-tRNA synthetase [Geobacillus sp. C56-T3]
          Length = 567

 Score =  146 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 55/244 (22%), Positives = 97/244 (39%), Gaps = 27/244 (11%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E + H+ L R      I +  SGV  +   G ++ Q + + +R ++      E+  P 
Sbjct: 17  DAEVKSHQLLLRAG---FIRQSASGVYTFLPLGQRVLQKVEAIIREEMNRIGAMELFMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQQSG W SY   +  +K      +  R FAL P +     A+    +K+Y+ L
Sbjct: 74  LQPAELWQQSGRWYSYGPELMRLKD-----RHERDFALGPTHEEMITAIVRDEVKTYKRL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT-KEQMFNECLKIHNLIISIYKD 417
           P+ L +  + +R+E      GL+R R F   DA+ F T KE +      ++    +I++ 
Sbjct: 129 PLVLYQIQTKFRDEKRPRF-GLLRGREFIMKDAYSFHTSKESLDETYNNMYEAYANIFRR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
            G     V   +       +             VL  I   +       +   + + Y  
Sbjct: 188 CGLNFRAVIADSGAIGGKDTHEF---------MVLSDIGEDT-------IAYSDASDYAA 231

Query: 478 KFEY 481
             E 
Sbjct: 232 NIEM 235



 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 25/159 (15%), Positives = 54/159 (33%), Gaps = 11/159 (6%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G +  +        NA Y++ + +    +M    +   + R +  + E F     
Sbjct: 404 RGIEVGHVFKLGTKYSEAMNAVYLDENGQTQTMIMGCYGI--GVSRLVAAIAEQFADEHG 461

Query: 548 L-WLSPIQAIVT------TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           L W + +             +      A+E    L      +  D R E    K  +  +
Sbjct: 462 LVWPASVAPFHIHLLTANAKSDEQHALAEEWYEKLGQAGFEVLYDDRPERAGVKFADSDL 521

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
             IP+ +  G + A E  + ++   +  T  V + + + 
Sbjct: 522 IGIPLRVTVGKR-AGEGVVEVKVRKTGETFDVPVSELVD 559


>gi|260889054|ref|ZP_05900317.1| proline--tRNA ligase [Leptotrichia hofstadii F0254]
 gi|260861114|gb|EEX75614.1| proline--tRNA ligase [Leptotrichia hofstadii F0254]
          Length = 570

 Score =  146 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 51/240 (21%), Positives = 101/240 (42%), Gaps = 11/240 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  L  Y    +E++   H+ + R    F I +   GV  +   G+++ + + +  R +
Sbjct: 4   SKAFLKTYKEAPKEAQIVSHQLMLRA---FMIKQLTRGVYTYLPFGYRVLKKIENITREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E+  P +    LW++SG W +Y   +  +K  ++     R F+L P +     
Sbjct: 61  MDRAGAQELLMPVLQPASLWEESGRWFAYGPELMRLKDRNE-----REFSLGPTHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNEC 404
            +    + SY+ELP  + +  + +R+E      GLMR R F   D + F  T+E +  E 
Sbjct: 116 DIVRDSISSYKELPFNVYQIQTKFRDEMRPRF-GLMRGREFVMKDGYSFHLTQESLDEEY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
           L + +    I++  G     V+  T       S      AE+    +L +  +     + 
Sbjct: 175 LNMKDTYSRIFERMGLNYRAVEADTGSIGGDVSHEFMVLAESGEDDILYSDSSDYAANVE 234



 Score = 72.1 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 64/164 (39%), Gaps = 13/164 (7%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN- 545
           R  + G I  +        NA  ++ + ++    ++    +G  + R I   IE      
Sbjct: 407 RGIEVGHIFKLGEKYSKALNATVLDENGKQ---AIMKMGCYGMGMSRIISAAIEQNHDEY 463

Query: 546 ---LPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
               P  ++P  A +        + V   +++ N L  + +    D RNE   +K ++  
Sbjct: 464 GIIWPKAIAPYHADIIIANMKDETQVNIGEKLYNELNQNKIEAVLDDRNERAGFKFKDAD 523

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +   P+ I+ G K A++  + I+   +  +  V + D +  +  
Sbjct: 524 LIGFPLKIVVG-KGAADGIVEIKDRKTGESTDVKVEDVLKFVNN 566


>gi|209364247|ref|YP_001425332.2| prolyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
 gi|207082180|gb|ABS76694.2| prolyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
          Length = 566

 Score =  146 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 49/222 (22%), Positives = 86/222 (38%), Gaps = 11/222 (4%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
            H+ + R   L  +A   SG+  W   G ++ Q +   +R ++      E+  P V    
Sbjct: 24  SHQLMIRAGMLRKLA---SGLYTWLPLGLRVLQKVADVVREEMNRAGALELLMPIVQPAS 80

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LWQ+SG W++Y A +  +       +    F   P +      +    LKSY++LP+   
Sbjct: 81  LWQESGRWEAYGAELLRIMD-----RHQNGFCFGPTHEEVITDIARQELKSYKQLPLNFY 135

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFEK 422
           +  + +R+E      G+MR R F   DA+ F   E+       K+ +    I+   G   
Sbjct: 136 QIQTKFRDEIRPRF-GVMRSREFLMKDAYSFDLDEKGMQAAYEKMFDAYRRIFTRLGLNF 194

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
             V   T       S      A+     V+ + ++     I 
Sbjct: 195 RAVLADTGAIGGDYSHEFQVLADVGEDTVVYSDESDYAANIE 236



 Score = 68.7 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 23/162 (14%), Positives = 51/162 (31%), Gaps = 9/162 (5%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G + Q+      + NA  V+   +  +  M      G        + +N      
Sbjct: 406 RGIEVGQVFQLGDKYSRKMNATVVDELGKSRYLQM-GCYGIGVSRTVAAAIEQNHDERGI 464

Query: 548 LWLSPIQAIVTTITS-------SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +W +P+      +            E  +++ N L      +  D R E       +  +
Sbjct: 465 IWPTPMAPFFIALVPVNMHKSYRVREACEKLYNELIDAGYEVLWDDRKERPGVMFADMDL 524

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             IP  ++  +       +  +   S   + VSL + + +  
Sbjct: 525 IGIPHRLVISESGLDRGIVEYKARKSKEAENVSLENVLSVFR 566


>gi|225174181|ref|ZP_03728180.1| phosphoribulokinase/uridine kinase [Dethiobacter alkaliphilus AHT
           1]
 gi|225169966|gb|EEG78761.1| phosphoribulokinase/uridine kinase [Dethiobacter alkaliphilus AHT
           1]
          Length = 559

 Score =  146 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 54/237 (22%), Positives = 100/237 (42%), Gaps = 2/237 (0%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           + +  PD  I   P + +  ++   ++       VA  ++ KV DL   V   S I+ + 
Sbjct: 10  VDILLPDNEIIELPGNRSLLEIRRDVAEHFPSTIVAALVDEKVRDLETVVDTPSVIKFLD 69

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
                   + + S   ++  A   ++P+ +V +   +  G Y + DK    ++DE+A IE
Sbjct: 70  LYTKEGARIYQRSLTFLLLYATHVLFPKAEVKVEHSLGKGLYCEIDKNSKLTADEVAAIE 129

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
           +KM E++ +D P +K  +  ++A E+F  +    KV + +  P KE +TLY    + D  
Sbjct: 130 QKMWEVVNQDLPIVKNKVPVDEAIEIFRKEGFEDKVRLYKRWP-KETLTLYGINSFHDSL 188

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
            G  V STG ++ F       G   R    +   S       N   ++ +       
Sbjct: 189 HGYMVPSTGVLQLFSLEYYEPGVILRFPDEKDPFSIPRFVEQNKLFDIFRESERWAR 245


>gi|71002510|ref|XP_755936.1| prolyl-tRNA synthetase [Aspergillus fumigatus Af293]
 gi|66853574|gb|EAL93898.1| prolyl-tRNA synthetase [Aspergillus fumigatus Af293]
 gi|159129993|gb|EDP55107.1| prolyl-tRNA synthetase [Aspergillus fumigatus A1163]
          Length = 637

 Score =  146 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 82/411 (19%), Positives = 156/411 (37%), Gaps = 68/411 (16%)

Query: 270 RKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDT 327
              + I++ + ++   +IK    +  + P  + + + Q +  H + + A +  V  A +T
Sbjct: 138 PASYFIWEEIQNWFNAEIKKVGVKNCSFPLFVSEDVLQREKDHIEGFAAEVAWVTHAGNT 197

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
             + +  A++P +       +   ++S+R+LP++L ++ SV R E        +R R F 
Sbjct: 198 PLEKK-IAIRPTSETVMYPYYAKWIRSHRDLPLKLNQWNSVVRWEFKHP-QPFLRTREFL 255

Query: 388 QDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
             + H    T+E    E L + NL   IY++     ++    T  EK  G          
Sbjct: 256 WQEGHTAHLTEEAAREEVLHMLNLYARIYEELLAVPVVKGQKTEKEKFAGG--------- 306

Query: 447 IMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSR 505
                                       Y    E  +  A GR  Q GT   +  N    
Sbjct: 307 ---------------------------LYTTTVEGYIP-ATGRGIQGGTSHGLGQNFSKM 338

Query: 506 FNAFYVNSH---SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVT 558
           F     +      EK  P+ + +  +G   R +G+M+     N  L L P     Q I+ 
Sbjct: 339 FGITVEDPSAKPDEKKPPLHVWQNSWGLSTRTLGVMVMIHSDNRGLVLPPRVAETQTIIV 398

Query: 559 TI------TSSAVE--YAQ--EIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIII 607
            +      +    E  YA+   + +LLK+  +  ++D R   +  +K  +  ++ +P+ I
Sbjct: 399 PVGITAKTSDEEREKLYAEIDSLVSLLKAAGIRADSDKREGYSPGWKFNDWELRGVPLRI 458

Query: 608 ICGDKEASERSIGIRRF---GSTTTQKVSLLD---AIPILTKESLPPDCQK 652
             G  E+  R +   R    G      + + +   A+P L  E++  D  K
Sbjct: 459 EFGPGESVGRYVTAARRDIPGKDGKSTIPIDELSTAVPALL-ETIHKDLYK 508


>gi|294631730|ref|ZP_06710290.1| prolyl-tRNA synthetase [Streptomyces sp. e14]
 gi|292835063|gb|EFF93412.1| prolyl-tRNA synthetase [Streptomyces sp. e14]
          Length = 567

 Score =  146 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 49/251 (19%), Positives = 95/251 (37%), Gaps = 14/251 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q           ++E   H+ L R   +   A    GV  W   G ++   +   +R +
Sbjct: 10  SQLMAKTLRDDPADAEVLSHKLLVRAGYVRRTAA---GVWSWLPLGRRVLANVERIVREE 66

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E+  P +L +  ++ +G WD Y   +F +K      +    + L P +     
Sbjct: 67  MDAIGAQEVLLPALLPKEPYEATGRWDEYGGELFRLKD-----RKGGDYLLGPTHEEIFT 121

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +      SY++LPV L +  S YR+E      G++R R F   D++ F T ++   E  
Sbjct: 122 LLVKDQASSYKDLPVILYQIQSKYRDEARPR-AGILRGREFLMKDSYSFDTADEGLAESY 180

Query: 406 KIH-NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIK---NSSQD 461
            +H      I++  G +  +   +        S+     AE       D       ++ +
Sbjct: 181 ALHRQAYQRIFERLGLDYRICAATAGAMGGSKSEEFLAPAEAGEDTFADCPNCDFAANTE 240

Query: 462 RINTGVLLGEG 472
            I   +   +G
Sbjct: 241 AITYELKPVDG 251



 Score = 83.3 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 28/174 (16%), Positives = 65/174 (37%), Gaps = 12/174 (6%)

Query: 476 GPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
            PK    LK  + R  + G I Q+            +  + +     M    +   + R 
Sbjct: 398 CPKCGTGLK--LDRAIEIGHIFQLGRKYTDALKLDVLGQNGKPVRVTMGSYGI--GVSRA 453

Query: 535 IGIMIENFKGN----LPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNE 589
           +  + E          P  ++P    V     +   E A +++  L +  + +  D R  
Sbjct: 454 VAALAEQHADEHGLVWPAEVAPADVHVVAAGKALQTEVALDVSQKLAAAGVRVLVDDRAG 513

Query: 590 -TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +   K  +  +  +P I++ G + A E  + ++   +   +++++ +A+  LT
Sbjct: 514 VSPGVKFTDAELIGVPQILVAGRR-AGEGVLELKNRRTGEREELTVEEALTRLT 566


>gi|148979813|ref|ZP_01815720.1| prolyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
 gi|145961607|gb|EDK26907.1| prolyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
          Length = 572

 Score =  146 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 64/332 (19%), Positives = 120/332 (36%), Gaps = 21/332 (6%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +   L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R+
Sbjct: 3   TSNYLLSTLKETPNDAEVISHQLMLRAGMIRKLA---SGLYTWLPTGLRVLRKVENIVRQ 59

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           +I      E   P V    LW+++G  +     +        T +  R F L P      
Sbjct: 60  EIDNAGAVETLMPVVQPFELWEETGRSEKMGPELLRF-----TDRHSRPFVLSPTAEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
            ++  + + SY++LP+ L +  + +R+E      G+MR R F+  DA+ F    E +   
Sbjct: 115 TSLVRNEVNSYKQLPLNLYQIQTKFRDERRPRF-GVMRAREFSMMDAYSFDIDKEGLEKS 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +H+   + +   G E   V   +      GS      AE+    +  + ++     I
Sbjct: 174 YQAMHDAYCNAFDRMGLEYRPVLADSGAIGGSGSQEFHVLAESGEDLIAFSTESDYAANI 233

Query: 464 NTGVLLG---EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHP 520
                L    E A   P  E  L D          ++       +         S++   
Sbjct: 234 EKAEALAPTEEAA--APTQEMELVDTPNAKTIAELVEQHGLAIEKTVKTLFVKASDEVDA 291

Query: 521 VMIHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
            +I   + G  E     + E    NLP   SP
Sbjct: 292 DIIALIIRGDHE-----LNEVKAENLPQVASP 318



 Score = 83.7 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 62/168 (36%), Gaps = 13/168 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           + R  + G I Q+        N   +    +    V++    +G  + R +   IE    
Sbjct: 405 LKRGIEVGHIFQLGNVYSQAMNCGVLGPDGKN---VILEMGCYGIGVSRVVASAIEQNHD 461

Query: 545 N----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                 P  L+P Q  +  +    +    E A+++   L +  + +  D R E       
Sbjct: 462 KYGIIWPDALAPFQVAIVPMNMHKSEEVKEAAEKLYAELTAMGIEVLFDDRKERPGVMFS 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  +  IP  I+ GD+   E +   +   + T + V++   +  +T +
Sbjct: 522 DIELIGIPHTIVIGDRSMKEGNFEYKNRRAGTKEAVAIDSIVEHVTSQ 569


>gi|94267977|ref|ZP_01291052.1| Prolyl-tRNA synthetase [delta proteobacterium MLMS-1]
 gi|93451782|gb|EAT02540.1| Prolyl-tRNA synthetase [delta proteobacterium MLMS-1]
          Length = 572

 Score =  146 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 48/221 (21%), Positives = 83/221 (37%), Gaps = 11/221 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L        E+E   H+ + R   +  +    SGV  +   G    + +   +R+
Sbjct: 3   FSQLLLPTLKEDPAEAEVISHKLMLRAGMIRKL---TSGVYSYLPLGLAAIRKVEEIVRQ 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +E+  P V    LW++SG W+ Y   +   +      +  R   L P +    
Sbjct: 60  EMNRAGAQELLLPMVQPADLWRESGRWEKYGPELLRFQD-----RHQRESCLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SYR+LP+ L +  + +R+E      GLMR R F   D + F   E   +E 
Sbjct: 115 TDLVRLNVHSYRDLPLNLYQIQTKFRDEIRPRF-GLMRGREFIMKDGYSFDADEAAADET 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
             K+      I+   G     V+  T       S      A
Sbjct: 174 YRKMQAAYQRIFARCGLAFRAVEADTGSIGGSFSHEFMVLA 214



 Score = 89.8 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 44/172 (25%), Positives = 74/172 (43%), Gaps = 15/172 (8%)

Query: 489 RDWQCGTIQVDFNLPSR-FNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN- 545
           R  + G I    N  SR  NA +++   +  H +M     FG  + R +   IE      
Sbjct: 402 RGIEVGHIFKLGNEYSRALNATFLDKEGQSRHFIM---GCFGIGVSRTVAAAIEQNHDRD 458

Query: 546 ---LPLWLSPIQAIVTTITSSAVEY---AQEIANLLKSHHLSIETDFRNETINYKIREHS 599
               PL ++P Q I+  +T    E    AQ +   L +  L +  D RNE    K ++  
Sbjct: 459 GIIFPLPIAPFQVILLNLTPKDPEISAEAQRLYRELTAAGLEVLLDDRNERPGAKFKDAD 518

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK---ESLPP 648
           +  IPI ++ G + A E  + IR      + + +   A+ ++T+   + LPP
Sbjct: 519 LIGIPIRLMVGKRFAQEGLLEIRNRADGRSSEATPAAAVAVITEMVAQQLPP 570


>gi|134299814|ref|YP_001113310.1| prolyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
 gi|172044305|sp|A4J5Y2|SYP_DESRM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|134052514|gb|ABO50485.1| prolyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
          Length = 569

 Score =  146 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 51/228 (22%), Positives = 91/228 (39%), Gaps = 11/228 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  +        E+E   H+ L R   +   A   SGV  +     ++ + L   +R +
Sbjct: 4   SQMLVPTLREVPAEAEVVSHQLLLRAGFIRKTA---SGVYTYLPLAQRVLKKLRQIIREE 60

Query: 287 IK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           I     +E+  P +    +W +SG W  Y   +F +K   D     R F L P +     
Sbjct: 61  IDKQGGQELLMPIIQPAEMWLESGRWHVYGPELFRLKDRHD-----RNFCLGPTHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    ++SY+++P+ L +  + YR+E      GL+R R F   D + F   E   +   
Sbjct: 116 ILIRGEVRSYKQMPLLLYQIQNKYRDERRPRF-GLLRGREFIMKDLYSFDRDEAGLDISY 174

Query: 406 -KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
            K+H    SI+   G +   V+  +       +      AE+    +L
Sbjct: 175 QKMHEAYTSIFSRCGVKFRPVEADSGAIGGSSTHEFMVLAESGEAAIL 222



 Score =  106 bits (265), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 38/175 (21%), Positives = 75/175 (42%), Gaps = 10/175 (5%)

Query: 476 GPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
            PK    L +A G +   G I  +         A +++ +  K  P+++     G     
Sbjct: 393 CPKCGAQLLEARGIE--VGQIFKLGTKYSKALGATFLDENG-KEQPIVMGCYGIGVSRTM 449

Query: 535 IGIMIENFKGNLPLWLS---PIQAIVTTITSS---AVEYAQEIANLLKSHHLSIETDFRN 588
              + +N+  +  +W +   P QAIV  +       ++ A+E+   L    +    D R+
Sbjct: 450 AAAIEQNYDKDGIIWPASIAPYQAIVIPVAPKDDNQMKIAEELYKALNQAGVETILDDRS 509

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           E    K ++  +   P+ I+ G+K  +E  + IR+  S  T  VS+ D++P + +
Sbjct: 510 ERPGVKFKDADLIGYPLRIVVGNKAVTEGVVEIRQRRSGQTDLVSVKDSVPKILE 564


>gi|219684697|ref|ZP_03539640.1| prolyl-tRNA synthetase [Borrelia garinii PBr]
 gi|219672059|gb|EED29113.1| prolyl-tRNA synthetase [Borrelia garinii PBr]
          Length = 488

 Score =  146 bits (367), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 76/431 (17%), Positives = 155/431 (35%), Gaps = 61/431 (14%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
           ++ ++   E+   + +  + ++  L   +     ++     G+ I+  + S + +K K+ 
Sbjct: 1   MSDFIASKEDDYSKWYLDIVQKAKLADYSPVKGCMVI-MPYGYSIWSKIQSILDKKFKES 59

Query: 290 DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
            +E    P ++     + +  H + +      +K A           L+P +      ++
Sbjct: 60  GHENAYFPMLIPYGFLEKEKDHIEGFSPEFAIIKDAGGESL-AEPLVLRPTSETIIWNMY 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
           +  +KSYR+LP+++ ++ +V R E        +R   F   + H   T      E L+  
Sbjct: 119 SKWIKSYRDLPLKINQWANVVRWEKR--TRPFLRTTEFLWQEGH---TAHATEEEALEET 173

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
            LI+ +YK F                          E+ +   +   K S +++      
Sbjct: 174 LLILDLYKRF-------------------------MEDYLAIPVFCGKKSEKEKF----- 203

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAV 527
              GA      E +++D   +  Q  T      N    F+  + +   +  H   +  + 
Sbjct: 204 --AGAVSTYSIEALMQD--KKALQAATSHYLGLNFAKAFDVKFQDKDGKMRH---VFASS 256

Query: 528 FGSIERFIGIMIENFKGN----LPLWLSPIQAIVTT-------ITSSAVEYAQEIANLLK 576
           +G   R IG +I          LP  ++PI+ IV         I    ++Y+  + N LK
Sbjct: 257 WGVSTRLIGALIMVHSDEKGLILPPRIAPIEIIVIPIFKKEDEINKKILDYSDCVVNALK 316

Query: 577 SHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT--TQKVS 633
                +E D     +  ++      K IPI I  G  +    S+ I R         ++S
Sbjct: 317 KAEFRVEVDKDVRSSPGFRFSSAEFKGIPIRIEVGINDVLLNSVTIVRRDKDRKFKYQIS 376

Query: 634 LLDAIPILTKE 644
           L      +  E
Sbjct: 377 LDSLASKVKIE 387


>gi|171463016|ref|YP_001797129.1| prolyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           necessarius STIR1]
 gi|226701317|sp|B1XT38|SYP_POLNS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|171192554|gb|ACB43515.1| prolyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           necessarius STIR1]
          Length = 580

 Score =  146 bits (367), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 44/208 (21%), Positives = 86/208 (41%), Gaps = 11/208 (5%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
            ++E   H+ + R   +  ++    GV  +   G K+ + + + +R ++      E+  P
Sbjct: 16  SDAEVVSHKLMVRAGLIRKLSA---GVYNYLPLGLKVIRKVENIIREEMNRAGAIELLMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LWQ++G W+     +  +K   D     R F ++P +      +  + +KSY++
Sbjct: 73  MIQPAELWQETGRWEKMGPELLRIKDRHD-----RDFLIQPTSEEVVTDLARNEIKSYKQ 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYK 416
           LPV   +  + +R+E      G+MR R F+  DA+ F    E +      + +    I+K
Sbjct: 128 LPVNFYQIQTKFRDERRPRF-GIMRGREFSMKDAYSFDRDTEGLKKSYQIMFDAYTRIFK 186

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDA 444
             G +   V          GS      A
Sbjct: 187 RMGLQFRAVTADNGAIGGSGSQEFHVIA 214



 Score = 82.1 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 24/167 (14%), Positives = 59/167 (35%), Gaps = 15/167 (8%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G + Q+           Y++    K  P+++     G   R +G  IE       
Sbjct: 409 RGIEVGHVFQLGTRYSEAMGCTYLDQQG-KAQPMVMGCYGIGVT-RLLGAAIEQGHDEKG 466

Query: 546 --LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
              P+ ++P + ++  +    + +      ++ + L +  + +  D RNE       +  
Sbjct: 467 IIWPISMAPCEVVICPMGYEKSEAVKAACDQLHDGLLAAGVDVILDDRNERPGAMFADWG 526

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL----LDAIPILT 642
           +   P  ++ GD+   +  +  +      +Q + L       I  + 
Sbjct: 527 LIGAPFRVVIGDRGLVDSQVEFKGRTDAESQNIPLTQIKEKVIAAIQ 573


>gi|78485419|ref|YP_391344.1| prolyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
 gi|114152273|sp|Q31GQ3|SYP_THICR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|78363705|gb|ABB41670.1| prolyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
          Length = 572

 Score =  146 bits (367), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 53/319 (16%), Positives = 109/319 (34%), Gaps = 15/319 (4%)

Query: 238 LEESEKRDHRKLAREMDLF--HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEI 294
                  D   ++ ++ L    I     G+  W   G ++ + + + +R ++     +E+
Sbjct: 10  TTRETPADAVVISHQLMLRAGIIRPLAGGLYNWLPLGVRVLRKVEAIIRDEMNKAQAQEL 69

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
             P V    LW++SG  ++Y   +   K      +  R FAL P +      +    ++S
Sbjct: 70  LMPVVQPMELWEESGRAEAYGPELLRFKD-----RHQREFALGPTHEEIITDLVRKEIRS 124

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIIS 413
           Y++LP    +  + +R+E      G+MR R F   DA+ F   +    +  + +++    
Sbjct: 125 YKQLPANFYQIQTKFRDEIRPRF-GVMRSREFIMKDAYSFHMDKDSLQKTYEDMYDTYNR 183

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           I+   G +   V+  T      GS      A++    +  +  +     I     L    
Sbjct: 184 IFTRLGLDFRPVQADTGSIGGEGSHEFHVLADSGEDDIAFSSDSDYAANIELAEALAPRG 243

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
                 E + K           +     L  +  A  +          ++   + G  + 
Sbjct: 244 ERAAATEELTKVETPNKHSIEDVCDFLQLKKKKVAKTLVVKGATEEHPVVALVIRGDHD- 302

Query: 534 FIGIMIENFKGNLPLWLSP 552
               + E     L L   P
Sbjct: 303 ----LNEIKAEKLDLVAEP 317



 Score = 80.2 bits (196), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 26/165 (15%), Positives = 55/165 (33%), Gaps = 7/165 (4%)

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           K  I R  + G I    N  S      V + + +   + +     G        + +N+ 
Sbjct: 401 KIEIRRGIEVGHIFQLGNKYSEALNATVLNENSRAQILEMGCYGIGVTRVVAAAIEQNYD 460

Query: 544 GNLPLWL---SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
               +W    +P Q  +  +    +    E    + N L +  + +  D R E       
Sbjct: 461 DKGIIWPEAIAPFQVCIVPMQMHKSPRVEEAVMTLYNELTAKGIEVLLDDRKERPGVMFN 520

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           +  +  IP  I+ G++   +  I  +      +Q +   + +  L
Sbjct: 521 DMELIGIPHRIVIGERGLDKGEIEYKHRRDEKSQDIPEAEFMEFL 565


>gi|146084156|ref|XP_001464941.1| bifunctional aminoacyl-trna synthetase [Leishmania infantum JPCM5]
 gi|134069036|emb|CAM67181.1| putative bifunctional aminoacyl-tRNA synthetase [Leishmania
           infantum JPCM5]
          Length = 722

 Score =  146 bits (367), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 77/408 (18%), Positives = 154/408 (37%), Gaps = 65/408 (15%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRAN 317
            D SG        + +++ +  ++  KI+    E+   P  + ++  + +  H + +   
Sbjct: 242 YDVSGCYIIRPWAYYVWKCVQRFLGGKIEKLGVEDCYFPMFVSRNCLEREKDHIEGFAPE 301

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           +  V  A DT  + +  A++P +       +   ++S+R+LPVRL  + +V R E S   
Sbjct: 302 VAWVTRAGDTELE-QPVAVRPTSETVMYPYYAKWIRSHRDLPVRLNMWNNVIRWEFSHPT 360

Query: 378 HGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
              +R R F   + H  +   E+   E L I     S+Y+      + V    + EK  G
Sbjct: 361 -PFIRTREFLWQEGHCAWAKAEECAKEVLDILECYASVYEQL--LAVPVVRGRKTEKFAG 417

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
            D                                    Y    E  ++ A+GR  Q  T 
Sbjct: 418 GD------------------------------------YTTTVETFIE-AVGRGCQGATS 440

Query: 497 Q-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLS 551
             +  N    F+  + +  + +   ++  +  +G   R IG+MI    +N    +P  ++
Sbjct: 441 HNLGQNFGKMFDIRFQDPENNEQT-LIPWQNSWGLSTRVIGVMIMVHGDNRGMVMPPRVA 499

Query: 552 PIQAIVTT--ITSSAVEYAQE--------IANLLKSHHLSIETDFRNE-TINYKIREHSI 600
             Q I+    IT    E A++        + + L    +  + D R+  +  ++     +
Sbjct: 500 STQVIIIPVGITKDTTEEARQELLASCRRLESELCEGGVRAKCDLRDNYSPGWRFNHWEV 559

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD----AIPILTKE 644
           K +P+ +  G +E +ERS+ +    S     V        A+  L ++
Sbjct: 560 KGVPLRVELGPRELAERSLAVAVRHSGARHSVVWDAQTPTAVAALLED 607


>gi|284992392|ref|YP_003410946.1| prolyl-tRNA synthetase [Geodermatophilus obscurus DSM 43160]
 gi|284065637|gb|ADB76575.1| prolyl-tRNA synthetase [Geodermatophilus obscurus DSM 43160]
          Length = 582

 Score =  146 bits (367), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 41/203 (20%), Positives = 84/203 (41%), Gaps = 11/203 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   HR L R   +        G   W   G+++F+ +   +R ++     +E++ P 
Sbjct: 19  DAEVPSHRLLVRAGYIR---RAAPGGFTWLPLGYRVFRNVERVVREEMDRMGAQEVHFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++ +  W  Y  N+F ++      +    F L P +      +      SY++L
Sbjct: 76  LLPREPYEATNRWTEYGPNLFRLQD-----RRGADFLLGPTHEEMFTLLVKDLYSSYKDL 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKD 417
           P+ L +  + YR+E      GL R R FT  D++ F   +   ++    H    I ++  
Sbjct: 131 PLSLYQIQTKYRDEARPR-AGLFRGREFTMKDSYSFDVDDAGLDKSYAAHRDAYIRVFDR 189

Query: 418 FGFEKIMVKLSTRPEKRVGSDAL 440
            G + ++V   +       S+  
Sbjct: 190 LGLDYVIVSAMSGAMGGSRSEEF 212



 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/161 (16%), Positives = 62/161 (38%), Gaps = 11/161 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I Q+        +   ++ + +     M    +   + R +  + E+    L 
Sbjct: 419 RGVEMGHIFQLGRKYAEALDLKVLDENGKLVTVTMGSYGI--GVSRAVAAIAESTHDELG 476

Query: 548 L-WL---SPIQAIVTTITSSAV--EYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSI 600
           L W    +P    V      A   E A+ +A  L +  L++  D R + +   K ++  +
Sbjct: 477 LVWPREVAPADVHVVATGKDAAVFETAEALAQELLAAGLTVLYDDRPKVSPGVKFKDAEL 536

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
             +P I+  G +  +E  + +R   +   ++V + +    +
Sbjct: 537 LGMPTIVTVG-RGLAEGVLELRDRATGEREEVPVGEVAARV 576


>gi|56419792|ref|YP_147110.1| prolyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
 gi|81819753|sp|Q5L0J4|SYP_GEOKA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|56379634|dbj|BAD75542.1| proline-tRNA synthetase [Geobacillus kaustophilus HTA426]
          Length = 567

 Score =  146 bits (367), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 55/244 (22%), Positives = 97/244 (39%), Gaps = 27/244 (11%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E + H+ L R      I +  SGV  +   G ++ Q + + +R ++      E+  P 
Sbjct: 17  DAEVKSHQLLLRAG---FIRQSASGVYTFLPLGQRVLQKVEAIIREEMNRIGAMELFMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQQSG W SY   +  +K      +  R FAL P +     A+    +K+Y+ L
Sbjct: 74  LQPAELWQQSGRWYSYGPELMRLKD-----RHERDFALGPTHEEMITAIVRDEVKTYKRL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT-KEQMFNECLKIHNLIISIYKD 417
           P+ L +  + +R+E      GL+R R F   DA+ F T KE +      ++    +I++ 
Sbjct: 129 PLVLYQIQTKFRDEKRPRF-GLLRGREFMMKDAYSFHTSKESLDETYNNMYEAYANIFRR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
            G     V   +       +             VL  I   +       +   + + Y  
Sbjct: 188 CGLNFRAVIADSGAIGGKDTHEF---------MVLSDIGEDT-------IAYSDASDYAA 231

Query: 478 KFEY 481
             E 
Sbjct: 232 NIEM 235



 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 25/159 (15%), Positives = 54/159 (33%), Gaps = 11/159 (6%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G +  +        NA Y++ + +    +M    +   + R +  + E F     
Sbjct: 404 RGIEVGHVFKLGTKYSEAMNAVYLDENGQTQTMIMGCYGI--GVSRLVAAIAEQFADEHG 461

Query: 548 L-WLSPIQAIVT------TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           L W + +             +      A+E    L      +  D R E    K  +  +
Sbjct: 462 LVWPASVAPFHIHLLTANAKSDEQRALAEEWYEKLGQAGFEVLYDDRPERAGVKFADSDL 521

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
             IP+ +  G + A E  + ++   +  T  V + + + 
Sbjct: 522 IGIPLRVTVGKR-AGEGVVEVKVRKTGETFDVPVSELVD 559


>gi|187607298|ref|NP_001120088.1| prolyl-tRNA synthetase 2, mitochondrial (putative) [Xenopus
           (Silurana) tropicalis]
 gi|165971208|gb|AAI58530.1| LOC100145097 protein [Xenopus (Silurana) tropicalis]
          Length = 466

 Score =  146 bits (367), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 75/494 (15%), Positives = 158/494 (31%), Gaps = 72/494 (14%)

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           C    +      +      K              L  +  +    +              
Sbjct: 8   CCRVLLPHIVTCRNHHVSAKGKRCLLSRLYQPRSLWEVKASETEAK----------PNEP 57

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
               +KL  +  L  I     G   +     +  + LI  + ++++D   ++I+ P +  
Sbjct: 58  TSKSQKLMIKAGL--IRPSSPGCFHYLPFTVRAMEKLIRLIDKEMQDIGGQKIDMPTLSS 115

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL-KSYRELPV 360
             LW+QSG WD     +F +       +  + + L P +      +       + +ELP+
Sbjct: 116 AALWRQSGRWDLMGKELFRLMD-----RHNQEYCLGPTHEEAVTHLVASEGGINNKELPL 170

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII-------- 412
            L +    +R+E      GL+R R F   D + F   ++   E  +              
Sbjct: 171 LLYQITRKFRDEQRP-CFGLLRGREFYMKDMYTFDISDESAYETYRNVCDAYTNIFRALG 229

Query: 413 ----SIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD------- 461
                +  D G     +         +G D L           ++ ++++ ++       
Sbjct: 230 VRFVKVQADTGNIGGKMSHEFHLPANIGEDRLLVCGSCDFSANVELLQHNEKNCPVCTGQ 289

Query: 462 -RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHP 520
            +   G+ +G   + G K+ ++ K        C   Q    +               C+ 
Sbjct: 290 LKETKGIEIGHTFYLGTKYSHVFKA------TCYDSQKTPFIAE-----------MGCYG 332

Query: 521 VMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVT----------TITSSAVEYAQE 570
           + + R +  S+E    ++ +    + P  ++P Q  +            IT S   Y + 
Sbjct: 333 IGVSRLLAASLE----VLSKEDDIHWPGLIAPYQVCLISPKKGSKESEAITISETLYDEI 388

Query: 571 IANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSI-GIRRFGSTTT 629
           I ++      ++  D    TI  +++E  +   P II+ G K     S+  +R   +   
Sbjct: 389 IQSVPWLRDETVLDDRSYLTIGKRVKEAHMTGYPYIIVVGKKALETPSLFEVRSHNTDEV 448

Query: 630 QKVSLLDAIPILTK 643
              S    I  L +
Sbjct: 449 HFFSREGVIDFLQR 462


>gi|148360654|ref|YP_001251861.1| prolyl-tRNA synthase [Legionella pneumophila str. Corby]
 gi|296106282|ref|YP_003617982.1| prolyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
 gi|166980133|sp|A5IGL5|SYP_LEGPC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|148282427|gb|ABQ56515.1| prolyl-tRNA synthase [Legionella pneumophila str. Corby]
 gi|295648183|gb|ADG24030.1| prolyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
          Length = 569

 Score =  146 bits (367), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 51/257 (19%), Positives = 98/257 (38%), Gaps = 27/257 (10%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L        ++E   H+ + R   +  +   GSG+  W   G ++ + + + +R 
Sbjct: 3   ASQWFLVTQKETPNDAEIASHQLMLRSGMIRKL---GSGLYTWMPLGLRVLRKVENIVRE 59

Query: 286 KIKDD-YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LWQ++G W+++   +  +K       + R +   P +    
Sbjct: 60  EMNKTHAMELLMPSVQPAELWQETGRWETFGGQLLTMKD-----SNQREYCFGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
             +  + L+SY++LPV   +  + +R+E      G+MR R F   DA+ F    E +   
Sbjct: 115 TDIMRNELQSYKQLPVNFYQIQTKFRDEIRPRF-GVMRAREFIMKDAYSFHLSIESLQET 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   G +   V+  T       S      AE            S +D I
Sbjct: 174 YKDMYQAYCRIFDRMGLKYRAVEADTGAIGGSASHEFQVLAE------------SGEDLI 221

Query: 464 NTGVLLGEGAFYGPKFE 480
                  + + Y    E
Sbjct: 222 FY----SDASDYAANIE 234



 Score = 84.4 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 65/163 (39%), Gaps = 9/163 (5%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G + Q+        NA  +N   +    +++     G        + ++   +  
Sbjct: 404 RGIEVGHVFQLGDKYAKAMNASVINEQGQLQT-MIMGCYGLGITRVVAAAIEQHHDEHGI 462

Query: 548 LW---LSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +W   L+P Q  +  +    + +  E A+ +   LKSH + +  D RNE       ++ +
Sbjct: 463 IWPQALAPFQVNIIPLNGARSQTVKEQAESLYQQLKSHGIDVLLDDRNERAGVLFADNDL 522

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             IP  ++  ++   +  I  +   S+ TQ ++L   +  + +
Sbjct: 523 IGIPHRLVVSERNLEQGCIEYKSRTSSETQLINLDKVVNFIIE 565


>gi|261419457|ref|YP_003253139.1| prolyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|319766272|ref|YP_004131773.1| prolyl-tRNA synthetase [Geobacillus sp. Y412MC52]
 gi|261375914|gb|ACX78657.1| prolyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|317111138|gb|ADU93630.1| prolyl-tRNA synthetase [Geobacillus sp. Y412MC52]
          Length = 567

 Score =  146 bits (367), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 55/244 (22%), Positives = 97/244 (39%), Gaps = 27/244 (11%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E + H+ L R      I +  SGV  +   G ++ Q + + +R ++      E+  P 
Sbjct: 17  DAEVKSHQLLLRAG---FIRQSASGVYTFLPLGQRVLQKVEAIIREEMNRIGAMELFMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQQSG W SY   +  +K      +  R FAL P +     A+    +K+Y+ L
Sbjct: 74  LQPAELWQQSGRWYSYGPELMRLKD-----RHERDFALGPTHEEMITAIVRDEVKTYKRL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT-KEQMFNECLKIHNLIISIYKD 417
           P+ L +  + +R+E      GL+R R F   DA+ F T KE +      ++    +I++ 
Sbjct: 129 PLVLYQIQTKFRDEKRPRF-GLLRGREFMMKDAYSFHTSKESLDETYNNMYEAYANIFRR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
            G     V   +       +             VL  I   +       +   + + Y  
Sbjct: 188 CGLNFRAVIADSGAIGGKDTHEF---------MVLSDIGEDT-------IAYSDASDYAA 231

Query: 478 KFEY 481
             E 
Sbjct: 232 NIEM 235



 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 25/159 (15%), Positives = 54/159 (33%), Gaps = 11/159 (6%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G +  +        NA Y++ + +    +M    +   + R +  + E F     
Sbjct: 404 RGIEVGHVFKLGTKYSEAMNAVYLDENGQTQTMIMGCYGI--GVSRLVAAIAEQFADEHG 461

Query: 548 L-WLSPIQAIVT------TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           L W + +             +      A+E    L      +  D R E    K  +  +
Sbjct: 462 LVWPASVAPFHIHLLTANAKSDEQRALAEEWYEKLGQAGFEVLYDDRPERAGVKFADSDL 521

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
             IP+ +  G + A E  + ++   +  T  V + + + 
Sbjct: 522 IGIPLRVTVGKR-AGEGVVEVKVRKTGETFDVPVSELVD 559


>gi|152981235|ref|YP_001354678.1| prolyl-tRNA synthetase [Janthinobacterium sp. Marseille]
 gi|166980130|sp|A6T2D1|SYP_JANMA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|151281312|gb|ABR89722.1| prolyl-tRNA synthetase [Janthinobacterium sp. Marseille]
          Length = 577

 Score =  146 bits (367), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 64/311 (20%), Positives = 119/311 (38%), Gaps = 11/311 (3%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEINTP 297
            ++E   H+ + R   +  I   GSG+  +   G ++ + + + +R ++ +    E+  P
Sbjct: 16  SDAEIVSHKLMMRAGMIKKI---GSGIYTYMPMGLRVIRKVEAIIREEMNNAHAIELLMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            V    LWQ++G WD   A +  VK      +  R FA++P +      V    +KSYR+
Sbjct: 73  LVQPAELWQETGRWDKMGAELMRVKD-----RHGREFAIQPTSEEVVTDVVRTEIKSYRQ 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYK 416
           LP+      + +R+E      GLMR R FT  DA+ F    + +      + +  + I+ 
Sbjct: 128 LPINFYHIQTKFRDERRPRF-GLMRGREFTMKDAYSFDRDIDGLKKSYQIMFDAYVKIFN 186

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
            FG +   V          GS      A+     ++    +     +     L   +   
Sbjct: 187 RFGLQFRAVAADNGAIGGSGSHEFHVIADTGEDALVYCPNSDYAANMEAAEALPLSSARA 246

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
              + + K A     +C  +    NLP       +    EK    +  + V+  + R   
Sbjct: 247 APTQALTKTATPGKAKCEDVAALLNLPLAQTVKSIVLTVEKEDKGVTSKQVWLLLLRGDH 306

Query: 537 IMIENFKGNLP 547
            + E     +P
Sbjct: 307 ELNEVKAAKIP 317



 Score = 85.2 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 34/193 (17%), Positives = 70/193 (36%), Gaps = 21/193 (10%)

Query: 462 RINTGVLLGEGAFYG--------PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVN 512
            +N G  L E   +         P  +     AI R  + G + Q+         A Y++
Sbjct: 377 GVNWGRDLPEAQVFDIRNVVEGDPSPDGKGTLAIQRGIEVGHVFQLGTAYSESMKATYLD 436

Query: 513 SHSEKCHPVMIHRAVFGS-IERFIGIMIE----NFKGNLPLWLSPIQAIVTTITSSAVEY 567
            + +   P +I    +G  + R +G  IE    +     P  L+P + ++  +     E 
Sbjct: 437 ENGK---PQLIQMGCYGIGVTRILGAAIEQNFDDKGIIWPTALAPFEVVLCPMGYDRSEG 493

Query: 568 AQ----EIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRR 623
            +    ++   L++  + +  D R E       +  +  +P  I+ GD+   E  +  + 
Sbjct: 494 VKAETDKLYEALQAAGVDVILDDRGERPGAMFADWELIGVPHRIVIGDRGLKEGKLEYQG 553

Query: 624 FGSTTTQKVSLLD 636
                   V+L +
Sbjct: 554 RRDAAATPVALEE 566


>gi|238787209|ref|ZP_04631008.1| Prolyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
 gi|238724471|gb|EEQ16112.1| Prolyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
          Length = 572

 Score =  146 bits (367), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 48/249 (19%), Positives = 96/249 (38%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGVRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E++ P V    LWQ+SG W+ Y   +       +     R F L P +    
Sbjct: 60  EMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGE-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLIRGEINSYKQLPLNFFQIQTKFRDEVRPRF-GVMRAREFLMKDAYSFHTTQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I++        V   T       S      AE+    ++ +  +     I
Sbjct: 174 YDAMYAAYSKIFERMDLNFRAVLADTGSIGGSASHEFQVLAESGEDDIVFSTGSDYAANI 233

Query: 464 NTGVLLGEG 472
                +   
Sbjct: 234 EFAEAMAPS 242



 Score = 87.5 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 57/168 (33%), Gaps = 13/168 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           I R  + G I Q+         A             ++    +G  + R +   IE    
Sbjct: 405 IKRGIEVGHIFQLGSKYSEAMKATVQGEDG---RNQVMTMGCYGIGVSRVVAAAIEQNHD 461

Query: 545 N----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +     P  ++P Q  +  +         E A+E+   L+SH + +  D R E       
Sbjct: 462 DRGIIWPDAIAPFQVAILPMNMHKSFRVKELAEELYATLRSHGIDVILDDRKERPGVMFA 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  +  +P  I+ GD+      +  +   +   Q +   + I  L  +
Sbjct: 522 DMELIGVPHNIVIGDRNLDSEEVEYKNRRAGEKQMIKTNEIIEFLLSQ 569


>gi|224025246|ref|ZP_03643612.1| hypothetical protein BACCOPRO_01980 [Bacteroides coprophilus DSM
           18228]
 gi|224018482|gb|EEF76480.1| hypothetical protein BACCOPRO_01980 [Bacteroides coprophilus DSM
           18228]
          Length = 554

 Score =  146 bits (367), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 50/233 (21%), Positives = 97/233 (41%), Gaps = 2/233 (0%)

Query: 11  DGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRS 69
           + S K+F   ++  D+ +  +  +    V+  +N KV  L   V     IE +    P  
Sbjct: 9   NNSTKDFAEGSSLLDIYKGFNLQMPYGPVSAKVNNKVESLDFRVYYNKDIEFLDITSPSG 68

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           +     S   I+ +AV+ ++P   +++   +  G++ D    +P   ++++ I+++MQE+
Sbjct: 69  MRTYVRSLCFILVKAVEELYPTGSISLEHPVSKGYFCDLHIGRPVKLEDVSAIKQRMQEL 128

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
           IA D PF +     EK   LF  +    K ++LE+   +      R G+  D   G  V 
Sbjct: 129 IAEDIPFQRIECHTEKVVHLFRERGMTDKAQLLET-SGQLYSYYNRLGDTVDYYYGSLVP 187

Query: 190 STGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           STG ++ F  +    G   R  + +               E+ Q  +   +  
Sbjct: 188 STGYIRLFDIVKYYDGLLLRIPNRQNPDHLEDVVKQEKMLEVFQEYHRWNQIM 240


>gi|203284314|ref|YP_002222054.1| prolyl-tRNA synthetase [Borrelia duttonii Ly]
 gi|201083757|gb|ACH93348.1| prolyl-tRNA synthetase [Borrelia duttonii Ly]
          Length = 491

 Score =  146 bits (367), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 75/434 (17%), Positives = 154/434 (35%), Gaps = 63/434 (14%)

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK 288
             ++ ++   EE   + +  + ++  L   +     ++     G+ I++ + S +  K K
Sbjct: 2   WFMSDFIASREEEFSKWYLDIVQKAKLVDYSPVKGCMVI-MPYGYAIWERIQSVIDDKFK 60

Query: 289 D-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA 346
           +  +E    P ++     + +  H   +   +  V  A           L+P +      
Sbjct: 61  ESGHENAYFPLLIPYEFLEREKEHVKGFSPELAVVTTAGGEEL-REPLVLRPTSETIIWN 119

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECL 405
           +++  +KSYR+LP+++ ++ ++ R E        +R   F   + H    T  +   E L
Sbjct: 120 MYSKWIKSYRDLPIKINQWANIIRWEKR--TKPFLRTTEFLWQEGHTAHETSNEAQEEAL 177

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
            I NL     +D+    +     T  EK  G                             
Sbjct: 178 FILNLYKKFVEDYLAIPVFYGKKTEREKFAG----------------------------- 208

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIH 524
                  A      E +++D   +  Q GT      N    F+  + N + E  +   + 
Sbjct: 209 -------AVSTYTIEALMQD--KKALQAGTSHYLGLNFAKAFDVKFQNKNGEMSY---VF 256

Query: 525 RAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI-------TSSAVEYAQEIAN 573
              +G   R IG +I    ++    LP  ++PI+ ++  I           +EYA  I +
Sbjct: 257 ATSWGVSTRLIGALIMVHSDSKGLILPPKIAPIEILIVPIFKKDDDVNKKILEYATTIFD 316

Query: 574 LLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGI--RRFGSTTTQ 630
           +L      +E D     +  ++      K IPI I  G  +     + +  R     +  
Sbjct: 317 ILVKEKFRVEIDKDFKNSPGFRFAASEFKGIPIRIEIGSNDILMDCVTVARRDRDKNSKY 376

Query: 631 KVSLLDAIPILTKE 644
           +VS  + +P + +E
Sbjct: 377 QVSFKELLPKIKEE 390


>gi|302554518|ref|ZP_07306860.1| prolyl-tRNA synthetase [Streptomyces viridochromogenes DSM 40736]
 gi|302472136|gb|EFL35229.1| prolyl-tRNA synthetase [Streptomyces viridochromogenes DSM 40736]
          Length = 566

 Score =  146 bits (367), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 45/265 (16%), Positives = 96/265 (36%), Gaps = 14/265 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q           ++E   H+ L R   +   A    G+  W   G K+   +   +R +
Sbjct: 10  SQLLAKTLRDDPADAEVLSHKLLVRAGYVRRTAA---GIWSWLPLGKKVLANVERIVREE 66

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E+  P +L +  ++ +G W+ Y   +F ++      +    + L P +     
Sbjct: 67  MDAVGAQEVLLPAILPREPYEATGRWEEYGPELFRLQD-----RKGGDYLLGPTHEEIFT 121

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +      SY++LPV L +  + YR+E      G++R R F   D++ F T ++   +  
Sbjct: 122 LLVKDQASSYKDLPVILYQIQNKYRDEARPR-AGILRGREFLMKDSYSFDTDDEGLAQSY 180

Query: 406 KIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIK---NSSQD 461
            +H      I+   G +  +   +        S+     AE       D       ++ +
Sbjct: 181 ALHREAYQKIFARLGLDYRICAATAGAMGGSKSEEFLAPAEAGEDTFADCPNCDFAANTE 240

Query: 462 RINTGVLLGEGAFYGPKFEYILKDA 486
            I   +   + +      +    D 
Sbjct: 241 AITYELKPVDASGVAAAEDIPTPDT 265



 Score = 83.3 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 24/164 (14%), Positives = 63/164 (38%), Gaps = 10/164 (6%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
            + R  + G I Q+            +  + +     M    +   + R +  + E    
Sbjct: 405 VLDRAIEIGHIFQLGRKYADALKLDVLGQNGKPVRVTMGSYGI--GVSRAVAALAEQSAD 462

Query: 545 NLPL-WLSPIQA----IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREH 598
           +  L W   +      +V    +   E A +I+  L +  + +  D R   +   K  + 
Sbjct: 463 DKGLCWPKEVAPADVHVVAAGKALQTELALDISGKLAAAGVRVLVDDRAGVSPGVKFTDS 522

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +  +P I++ G + A++  + ++   +   +++++ +A+  LT
Sbjct: 523 ELIGVPQILVAGRR-AADGVVELKDRRTGEREELTVEEAVARLT 565


>gi|161829880|ref|YP_001596051.1| prolyl-tRNA synthetase [Coxiella burnetii RSA 331]
 gi|189083495|sp|A9N9Z2|SYP_COXBR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|161761747|gb|ABX77389.1| prolyl-tRNA synthetase [Coxiella burnetii RSA 331]
          Length = 564

 Score =  146 bits (367), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 49/222 (22%), Positives = 86/222 (38%), Gaps = 11/222 (4%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
            H+ + R   L  +A   SG+  W   G ++ Q +   +R ++      E+  P V    
Sbjct: 22  SHQLMIRAGMLRKLA---SGLYTWLPLGLRVLQKVADVVREEMNRAGALELLMPIVQPAS 78

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LWQ+SG W++Y A +  +       +    F   P +      +    LKSY++LP+   
Sbjct: 79  LWQESGRWEAYGAELLRIMD-----RHQNGFCFGPTHEEVITDIARQELKSYKQLPLNFY 133

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFEK 422
           +  + +R+E      G+MR R F   DA+ F   E+       K+ +    I+   G   
Sbjct: 134 QIQTKFRDEIRPRF-GVMRSREFLMKDAYSFDLDEKGMQAAYEKMFDAYRRIFTRLGLNF 192

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
             V   T       S      A+     V+ + ++     I 
Sbjct: 193 RAVLADTGAIGGDYSHEFQVLADVGEDTVVYSDESDYAANIE 234



 Score = 68.3 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 23/162 (14%), Positives = 50/162 (30%), Gaps = 9/162 (5%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G + Q+      + NA  V+   +  +  M      G        + +N      
Sbjct: 404 RGIEVGQVFQLGDKYSRKMNATVVDELGKSRYLQM-GCYGIGVSRTVAAAIEQNHDERGI 462

Query: 548 LWLSPIQAIVTTITS-------SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +W  P+      +            E  +++ N L      +  D R E       +  +
Sbjct: 463 IWPMPMAPFFIALVPVNMHKSYRVREACEKLYNELIDAGYEVLWDDRKERPGVMFADMDL 522

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             IP  ++  +       +  +   S   + VSL + + +  
Sbjct: 523 IGIPHRLVISESGLDRGIVEYKARKSKEAENVSLENVLSVFR 564


>gi|256752738|ref|ZP_05493586.1| AAA ATPase [Thermoanaerobacter ethanolicus CCSD1]
 gi|256748376|gb|EEU61432.1| AAA ATPase [Thermoanaerobacter ethanolicus CCSD1]
          Length = 547

 Score =  145 bits (366), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 47/236 (19%), Positives = 91/236 (38%), Gaps = 3/236 (1%)

Query: 12  GSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDP-VREGSIEIITPEDPRSL 70
           G+I  +P      D+A+          VA  ++ ++ DL+   +++ ++E +        
Sbjct: 7   GNIYEYPEGTKLEDIAKDFEHVYNGIIVAAKVDNELRDLNYTVLKDSTVEFVDTTIEEGT 66

Query: 71  AVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEII 130
            + R S   +  +AV+ + P   V I   +  G Y +       ++  ++ I+K+M+EII
Sbjct: 67  RIYRRSLTFVFIKAVKELLPGATVTIEHSLGKGLYCEIHG-YSLNNKIVSMIKKRMEEII 125

Query: 131 ARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRS 190
            +D    ++ L  E+A +LFE +    KV++ +    K+ V +Y      D    P V S
Sbjct: 126 EKDLKIERKMLPKEEAIKLFEKEGLTEKVKLFKD-TDKDKVPVYYCDGTVDFFYSPCVPS 184

Query: 191 TGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDH 246
           TG +K F       G            S            + +            +
Sbjct: 185 TGYLKVFDIRFYFPGIILIAPDVYNPRSLPAFVDVPKLASIFKEAEDWASILNISY 240


>gi|203287850|ref|YP_002222865.1| prolyl-tRNA synthetase [Borrelia recurrentis A1]
 gi|201085070|gb|ACH94644.1| prolyl-tRNA synthetase [Borrelia recurrentis A1]
          Length = 491

 Score =  145 bits (366), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 75/434 (17%), Positives = 154/434 (35%), Gaps = 63/434 (14%)

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK 288
             ++ ++   EE   + +  + ++  L   +     ++     G+ I++ + S +  K K
Sbjct: 2   WFMSDFIASREEEFSKWYLDIVQKAKLVDYSPVKGCMVI-MPYGYAIWERIQSVIDDKFK 60

Query: 289 D-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA 346
           +  +E    P ++     + +  H   +   +  V  A           L+P +      
Sbjct: 61  ESGHENAYFPLLIPYEFLEREKEHVKGFSPELAVVTTAGGEEL-REPLVLRPTSETIIWN 119

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECL 405
           +++  +KSYR+LP+++ ++ ++ R E        +R   F   + H    T  +   E L
Sbjct: 120 MYSKWIKSYRDLPIKINQWANIIRWEKR--TKPFLRTTEFLWQEGHTAHETSNEAQEEAL 177

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
            I NL     +D+    +     T  EK  G                             
Sbjct: 178 FILNLYKKFVEDYLAIPVFYGKKTEREKFAG----------------------------- 208

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIH 524
                  A      E +++D   +  Q GT      N    F+  + N + E  +   + 
Sbjct: 209 -------AVSTYTIEALMQD--KKALQAGTSHYLGLNFAKAFDVKFQNKNGEMSY---VF 256

Query: 525 RAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI-------TSSAVEYAQEIAN 573
              +G   R IG +I    ++    LP  ++PI+ ++  I           +EYA  I +
Sbjct: 257 ATSWGVSTRLIGALIMVHSDSKGLILPPKIAPIEILIVPILKKDDDVNKKILEYATTIFD 316

Query: 574 LLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGI--RRFGSTTTQ 630
           +L      +E D     +  ++      K IPI I  G  +     + +  R     +  
Sbjct: 317 ILVKEKFRVEIDKDFKNSPGFRFAASEFKGIPIRIEIGSNDILMDCVTVARRDRDKNSKY 376

Query: 631 KVSLLDAIPILTKE 644
           +VS  + +P + +E
Sbjct: 377 QVSFKELLPKIKEE 390


>gi|54310060|ref|YP_131080.1| prolyl-tRNA synthetase [Photobacterium profundum SS9]
 gi|81828683|sp|Q6LN48|SYP_PHOPR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|46914499|emb|CAG21278.1| putative prolyl-tRNA synthetase [Photobacterium profundum SS9]
          Length = 571

 Score =  145 bits (366), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 50/250 (20%), Positives = 96/250 (38%), Gaps = 11/250 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +   L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R+
Sbjct: 3   TSNYLLSTLKETPNDAEVISHQLMLRAGMIRKLA---SGLYTWLPTGLRVLRKVENIVRQ 59

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           +I      EI  P V    LW+++G  +     +        T +  R F L P      
Sbjct: 60  EIDNAGAVEILMPVVQPFELWEETGRSEKMGPELLRF-----TDRHSRPFVLSPTAEEVV 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
            ++  + + SY++LP+ L +  + +R+E      G+MR R F+  DA+ F    E +   
Sbjct: 115 TSLVRNEISSYKQLPLNLYQIQTKFRDERRPRF-GVMRAREFSMMDAYSFDIDKEGLEKS 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +H+     +   G E   V   +      GS      AE+    +  +  +     I
Sbjct: 174 YQAMHDAYCKAFDRMGLEYRPVLADSGAIGGSGSQEFHVLAESGEDLIAFSSDSDYAANI 233

Query: 464 NTGVLLGEGA 473
                L   A
Sbjct: 234 EKAEALAPTA 243



 Score = 88.3 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 25/166 (15%), Positives = 56/166 (33%), Gaps = 11/166 (6%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           + R  + G I Q+  N   + N   +    +     M    +   + R +   IE     
Sbjct: 405 LKRGIEVGHIFQLGTNYSKKMNCNVLGPDGKSATLEMGCYGI--GVSRIVASAIEQNNDE 462

Query: 546 ----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
                P  L+P Q  +  +    +      A+ +   L +  + +  D R E      ++
Sbjct: 463 NGIIWPTALAPFQVAIVPMNMAKSEEVKAAAESLYAELTAAGIEVLFDDRKERPGVMFKD 522

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             +  IP  I+ G++      +  +         V + D + ++ +
Sbjct: 523 IELIGIPHTIVIGNRSLENGEMEYKDRRDGNKVAVPVADVVEMIKQ 568


>gi|254508639|ref|ZP_05120754.1| prolyl-tRNA synthetase [Vibrio parahaemolyticus 16]
 gi|219548396|gb|EED25406.1| prolyl-tRNA synthetase [Vibrio parahaemolyticus 16]
          Length = 571

 Score =  145 bits (366), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 60/330 (18%), Positives = 115/330 (34%), Gaps = 17/330 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +   L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R+
Sbjct: 3   TSNYLLSTLKETPNDAEVVSHQLMLRAGMIRKLA---SGLYTWLPTGLRVLRKVENIVRQ 59

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           +I      E   P V    LW+++G  +     +        T +  R F L P      
Sbjct: 60  EIDNAGAVETLMPVVQPFELWEETGRSEKMGPELLRF-----TDRHTRPFVLSPTAEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
            ++  + + SY++LP+ L +  + +R+E      G+MR R F   DA+ F    E +   
Sbjct: 115 TSLVRNEVSSYKQLPLNLYQIQTKFRDERRPRF-GVMRAREFCMMDAYSFDIDKEGLEKS 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +H+     +   G E   V   +      GS      AE+    +  + ++     I
Sbjct: 174 YQAMHDAYCKAFDRMGLEYRPVLADSGAIGGSGSQEFHVLAESGEDLIAFSTESDYAANI 233

Query: 464 NTGVLLGEGAFYG-PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
                         P  E  L D          ++       +         S++    +
Sbjct: 234 EKAEAAAPAGDRAEPTQEMTLVDTPNAKTIAELVEQFDMPIEKTVKTLFVKASDEVDADI 293

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
           I   + G  E     + E    NLP   +P
Sbjct: 294 IALIIRGDHE-----LNEVKAENLPQVAAP 318



 Score = 86.4 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 60/168 (35%), Gaps = 13/168 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           + R  + G I Q+        N   +    +    V++    +G  + R +   IE    
Sbjct: 405 LKRGIEVGHIFQLGNTYSEAMNCGVLGPDGKN---VILEMGCYGIGVSRVVASAIEQNHD 461

Query: 545 N----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                 P  L+P Q  +  +    +    E A+++   L +  + +  D R E       
Sbjct: 462 KYGIIWPDALAPFQVAIVPMNMHKSEEVKEAAEKLYAELTAMGIEVLFDDRKERPGVMFS 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  +  IP  I+ GD+   E +   +   S     V++ D +  +  +
Sbjct: 522 DMELIGIPHTIVIGDRSMKEGNFEYKNRRSGEKTAVAMADIVEHVKAQ 569


>gi|29653442|ref|NP_819134.1| prolyl-tRNA synthetase [Coxiella burnetii RSA 493]
 gi|81839111|sp|Q83F67|SYP_COXBU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|29540704|gb|AAO89648.1| prolyl-tRNA synthetase [Coxiella burnetii RSA 493]
          Length = 566

 Score =  145 bits (366), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 49/222 (22%), Positives = 86/222 (38%), Gaps = 11/222 (4%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
            H+ + R   L  +A   SG+  W   G ++ Q +   +R ++      E+  P V    
Sbjct: 24  SHQLMIRAGMLRKLA---SGLYTWLPLGLRVLQKVADVVREEMNRAGALELLMPIVQPAS 80

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LWQ+SG W++Y A +  +       +    F   P +      +    LKSY++LP+   
Sbjct: 81  LWQESGRWEAYGAELLRIMD-----RHQNGFCFGPTHEEVITDIARQELKSYKQLPLNFY 135

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFEK 422
           +  + +R+E      G+MR R F   DA+ F   E+       K+ +    I+   G   
Sbjct: 136 QIQTKFRDEIRPRF-GVMRSREFLMKDAYSFDLDEKGMQAAYEKMFDAYRRIFTRLGLNF 194

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
             V   T       S      A+     V+ + ++     I 
Sbjct: 195 RAVLADTGAIGGDYSHEFQVLADVGEDTVVYSDESDYAANIE 236



 Score = 68.3 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 23/162 (14%), Positives = 50/162 (30%), Gaps = 9/162 (5%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G + Q+      + NA  V+   +  +  M      G        + +N      
Sbjct: 406 RGIEVGQVFQLGDKYSRKMNATVVDELGKSRYLQM-GCYGIGVSRTVAAAIEQNHDERGI 464

Query: 548 LWLSPIQAIVTTITS-------SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +W  P+      +            E  +++ N L      +  D R E       +  +
Sbjct: 465 IWPMPMAPFFIALVPVNMHKSYRVREACEKLYNELIDAGYEVLWDDRKERPGVMFADMDL 524

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             IP  ++  +       +  +   S   + VSL + + +  
Sbjct: 525 IGIPHRLVISESGLDRGIVEYKARKSKEAENVSLENVLSVFR 566


>gi|312214020|emb|CBX94022.1| similar to prolyl-tRNA synthetase [Leptosphaeria maculans]
          Length = 561

 Score =  145 bits (366), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 76/422 (18%), Positives = 146/422 (34%), Gaps = 68/422 (16%)

Query: 252 EMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQ-QSG 309
                    D +G        + I++++ ++   KIK         P  +     + +  
Sbjct: 66  TKGQMISYYDVAGCYILEPSSYAIWESIKAWFDAKIKTRKTRNAYFPIFISADNLEREKE 125

Query: 310 HWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVY 369
           H + + A +  V     +  +    A++P +       F   ++S+R+LP++L ++ +V 
Sbjct: 126 HVEGFAAEVAWVTKGGKSDLEK-PVAVRPTSETAMYPYFARKIQSHRDLPLKLNQWNNVV 184

Query: 370 RNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLS 428
           R E    +   +R R F   + H    T+E+   E L+I +    +Y++           
Sbjct: 185 RWEFKHPM-PFIRSREFLWQEGHTAHLTEEEASAEVLQILDWYSDVYQNL---------- 233

Query: 429 TRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIG 488
                                     +         T      GA Y    E  +  A G
Sbjct: 234 --------------------------LAVPVVKGTKTVNEKFPGADYTTTIEGFIP-ATG 266

Query: 489 RDWQCGTIQVDFNLPSRFNAFYV----NSHSEKCHPVMIHRAVFGSIERFIGIMI----E 540
           R  Q  T        S+     V       + K   V + +  +G   R IG+MI    +
Sbjct: 267 RGIQAATSHCLGQHFSKMFNITVEDPTAKENGKSEHVHVWQTSWGLTTRSIGVMILTHGD 326

Query: 541 NFKGNLPLWLSPIQAIVTTIT--------SSAVEY--AQEIANLLKSHHLSIETDFR-NE 589
           N    +P  ++ IQ ++  +              Y   + IA+ L    + +ETD+R   
Sbjct: 327 NRGLVIPPRVAEIQVVLIPVGVTAKMSAEDKEALYSKVKNIADDLHEVGVRVETDYREGY 386

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT----QKVSLLDA---IPILT 642
           +  +K  +  +K IP+ I  G K+A +  +   R             S+ +    IP L 
Sbjct: 387 SPGWKFNDWELKGIPLRIEFGPKDAEKGVVTTSRRDIDDKDAARGTTSVDNIKTEIPKLL 446

Query: 643 KE 644
           ++
Sbjct: 447 EQ 448


>gi|257462679|ref|ZP_05627088.1| prolyl-tRNA synthetase [Fusobacterium sp. D12]
          Length = 593

 Score =  145 bits (366), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 54/244 (22%), Positives = 100/244 (40%), Gaps = 11/244 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  +       +E+E   H+ L R   +  +A   SG+  +   G++  + + + +R 
Sbjct: 27  FSKAYIKTLKETPKEAEIISHQLLLRAGMIKKLA---SGLYTYLPLGFRTLKKVENIIRE 83

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +E+  P +    LW++SG W+     M  +K      +  R F L P N    
Sbjct: 84  EMDRAGSQELLMPVLQPAELWRESGRWNVMGEEMVRLKD-----RHQRDFVLGPTNEEVI 138

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
             +  + + SY+ LP+ L    +  R+E      GLMR R F   DA+ F T  E +  E
Sbjct: 139 TDIVRNDISSYKSLPINLYHIQTKVRDERRPRF-GLMRSREFIMKDAYSFHTSQESLDEE 197

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              + N    I++  G +   V+  +      GS      AE+    ++ +   S    +
Sbjct: 198 FENMKNTYTRIFERCGLKFRPVEADSGAIGGSGSQEFHVLAESGEDEIIYSDGCSYAANV 257

Query: 464 NTGV 467
            T V
Sbjct: 258 ETAV 261



 Score = 84.1 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 37/162 (22%), Positives = 67/162 (41%), Gaps = 9/162 (5%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  +CG I  +         A Y++   E    +++     G        + +N+  N  
Sbjct: 429 RGIECGHIFKLGDKYSKALGASYLDEKGESKI-MLMGCYGIGVGRTMAAAIEQNYDENGI 487

Query: 548 LW---LSPIQAIVTT---ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W   L+P    V       +  ++ A+EI   L   HL    D R+E   +K ++  + 
Sbjct: 488 IWPTALAPYLVDVIPANIKNTEQMKLAEEIYENLNKEHLDAMIDDRDERPGFKFKDADLI 547

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             P  IICG K A+E  + ++   +  T +VS  + IP + +
Sbjct: 548 GFPFKIICGKK-AAENIVELKIRKTGETLEVSADEVIPTIKE 588


>gi|152996360|ref|YP_001341195.1| prolyl-tRNA synthetase [Marinomonas sp. MWYL1]
 gi|189083502|sp|A6VXT1|SYP_MARMS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|150837284|gb|ABR71260.1| prolyl-tRNA synthetase [Marinomonas sp. MWYL1]
          Length = 574

 Score =  145 bits (366), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 42/221 (19%), Positives = 87/221 (39%), Gaps = 11/221 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +    +       ++    H+ + R   +  +++   G+  W   G K+F+ + + +R 
Sbjct: 3   ASNYLFSTLRDAPTDAVVTSHQLMIRAGMIRQVSK---GLYTWLPTGLKVFRKIENIVRD 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           +++     E+  P V    LWQ++G W  Y   +  ++      +  R + L P +    
Sbjct: 60  EMEKAGSLEVMMPGVQPAELWQETGRWQKYGPELLRLQD-----RHGREYCLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT-KEQMFNE 403
             +  + L SY++LP+   +  + +R+E      G+MR R F   DA+ F    E +   
Sbjct: 115 TELARNELTSYKQLPMNFFQIQTKFRDEVRPRF-GVMRSREFCMKDAYSFHVGAESLQET 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
              +H    +++   G     V+  T       S      A
Sbjct: 174 YDIMHKAYCNVFDRIGLNYRPVRADTGSIGGAYSHEFHVLA 214



 Score = 94.8 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 32/175 (18%), Positives = 65/175 (37%), Gaps = 13/175 (7%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
           P  +      I R  + G I Q+         A  ++ + +     ++H   +G  + R 
Sbjct: 399 PSPDGQGTIVIKRGIEVGHIFQLGQQYAEALKATVLDENGKAQ---VMHMGCYGIGVSRI 455

Query: 535 IGIMIE-NFKGNLPLWL---SPIQAIVTTITSSAVEY----AQEIANLLKSHHLSIETDF 586
           +   IE NF     LW    +P    +  +     E        +   LK+  L +  D 
Sbjct: 456 VAAAIEQNFDEKGILWPESIAPFDIAIVAMNYDKSEAVRTECDRLYAELKAKGLDVLLDD 515

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           R E    K  +  +  IP  ++ GDK   + ++  +   +   + +++ DA+  +
Sbjct: 516 RKERPGVKFADCELLGIPHRLVVGDKGLEKGTLEYKYRKAGDNEDIAIADAVEFI 570


>gi|304317458|ref|YP_003852603.1| ATPase AAA [Thermoanaerobacterium thermosaccharolyticum DSM 571]
 gi|302778960|gb|ADL69519.1| AAA ATPase [Thermoanaerobacterium thermosaccharolyticum DSM 571]
          Length = 547

 Score =  145 bits (366), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 48/217 (22%), Positives = 91/217 (41%), Gaps = 3/217 (1%)

Query: 12  GSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSL 70
           G+ + FP + T  ++++    +     VA  ++  + DLS  V R+  I+ +       +
Sbjct: 7   GTTRFFPYNVTLLEISQHFKDNHKSTIVAAKVDNLMVDLSTKVDRDCEIQFVDMSTEEGM 66

Query: 71  AVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEII 130
            V R S   ++ +AV+ I P  +V I   +  G Y +       ++  +  I+ +M+EII
Sbjct: 67  MVYRRSLTFVLIKAVKDILPGSKVTIEHSLGKGLYCEIHG-STVNNKIVQTIKNRMKEII 125

Query: 131 ARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRS 190
             + P +K+Y+  ++A +LF  +    KV  L     ++ + +Y   +  D    P V S
Sbjct: 126 DANYPIVKKYMDKKEALDLFMKEGLKEKVC-LFKYSDRDEIPVYYCDDVVDFFYSPCVPS 184

Query: 191 TGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNT 227
           TG +K F  L+   G                      
Sbjct: 185 TGYLKLFDLLLYFPGVILLFPEPAKPDVLPTFVDVPK 221


>gi|253583421|ref|ZP_04860619.1| proline-tRNA ligase [Fusobacterium varium ATCC 27725]
 gi|251833993|gb|EES62556.1| proline-tRNA ligase [Fusobacterium varium ATCC 27725]
          Length = 569

 Score =  145 bits (366), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 58/259 (22%), Positives = 105/259 (40%), Gaps = 14/259 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  +       +E+E   H+ L R   +  +    SGV  +   G+K  + + + +R 
Sbjct: 3   FSKSYIKTLKETPKEAETASHKLLLRAGMIKKL---TSGVYTYLPLGYKALRKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +EI  P +    LW++SG WD     M  ++      ++ R F L P +    
Sbjct: 60  EMNRAGSQEILMPVLQPAELWKESGRWDVMGPLMMKLQD-----RNKRDFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNE 403
             +  + + SY+ LP+ L +  + +R+E      GLMR R F   D + F  T E +  E
Sbjct: 115 TDLIRNDISSYKSLPLSLYQIQTKFRDEIRPRF-GLMRGREFVMKDGYSFHATVESLDEE 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            L + +    I+   G +   V+  +      GS      A++    ++     S    +
Sbjct: 174 FLNMRDTYSRIFSRCGLKFRPVEADSGAIGGSGSQEFHVLADSGEDEIIYCDSCSYAANV 233

Query: 464 NTGVLLGEGAFYGPKFEYI 482
            T V   E A   PK E  
Sbjct: 234 ETAVSKVEAA---PKEEIK 249



 Score = 76.7 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 61/163 (37%), Gaps = 11/163 (6%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G I  +        NA +++   E    VMI       + R +   IE       
Sbjct: 405 RGIEVGHIFKLGDKYSKAMNATFLDDKGESK--VMIMGCYGIGVSRTLASAIEQNNDEFG 462

Query: 546 --LPLWLSPIQAIVTT---ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              P  L+P    V          V+ A+EI   L +  +    D R+E   +K ++  +
Sbjct: 463 IIWPTALAPYIVDVIPANIKNEEQVKVAEEIYEALLNDGIEAMIDDRDERPGFKFKDADL 522

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              P  ++ G K A E  + ++   +  T ++S  D +  + +
Sbjct: 523 IGFPFKVVSGKK-AGEGIVELKIRRTGETIELSKDDVVSTVRE 564


>gi|322490370|emb|CBZ25630.1| putative prolyl-tRNA synthetase, putative,bifunctional
           aminoacyl-tRNA synthetase [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 715

 Score =  145 bits (366), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 73/382 (19%), Positives = 145/382 (37%), Gaps = 50/382 (13%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ-HLWQQSGHWDSYRAN 317
            D SG        + +++ +  ++  KI+    E+   P  + +  L ++  H + +   
Sbjct: 245 YDVSGCYIIRPWAYYVWKCVQRFLGGKIERLGVEDCYFPMFVSRSCLEREKDHIEGFAPE 304

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           +  V  A DT  + +  A++P +       +   ++S+R+LPVRL  + +V R E S   
Sbjct: 305 VAWVTRAGDTELE-QPVAVRPTSETVMYPYYAKWIRSHRDLPVRLNMWNNVIRWEFSHPT 363

Query: 378 HGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
              +R R F   + H  +   E+   E L I     S+Y+      ++    T  EK  G
Sbjct: 364 -PFIRTREFLWQEGHCAWAKAEECAKEVLDILECYASVYEQLLAVPVVRGRKTEKEKFAG 422

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
                                                 Y    E  ++ A+GR  Q  T 
Sbjct: 423 G------------------------------------HYTTTVETFIE-AVGRGCQGATS 445

Query: 497 Q-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLS 551
             +  N    F+  + +  + +   ++  +  +G   R IG+MI    +N    +P  ++
Sbjct: 446 HNLGQNFGKMFDIRFQDPENNEQT-LIPWQNSWGLSTRVIGVMIMVHGDNRGMVMPPRVA 504

Query: 552 PIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICG 610
             Q I+  +  +  +  +E    L    L  + D R+  +  ++     +K +P+ +  G
Sbjct: 505 STQVIIIPVGIT-KDTTEEARQGLLCSCLRAKCDLRDNYSPGWRFNHWEVKGVPLRVELG 563

Query: 611 DKEASERSIGIRRFGSTTTQKV 632
            +E +ERS+ +    S     V
Sbjct: 564 PRELAERSLAVAVRHSGARHSV 585


>gi|270157462|ref|ZP_06186119.1| prolyl-tRNA synthetase [Legionella longbeachae D-4968]
 gi|289164147|ref|YP_003454285.1| Prolyl-tRNA synthetase (Proline--tRNA ligase)(ProRS)(Global RNA
           synthesis factor) [Legionella longbeachae NSW150]
 gi|269989487|gb|EEZ95741.1| prolyl-tRNA synthetase [Legionella longbeachae D-4968]
 gi|288857320|emb|CBJ11147.1| Prolyl-tRNA synthetase (Proline--tRNA ligase)(ProRS)(Global RNA
           synthesis factor) [Legionella longbeachae NSW150]
          Length = 569

 Score =  145 bits (366), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 47/217 (21%), Positives = 91/217 (41%), Gaps = 11/217 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L        ++E   H+ + R   +  +   GSG+  W   G K+ + +   +R 
Sbjct: 3   ASQWFLATLKETPNDAEIVSHQLMVRTGMIRKL---GSGLYTWMPLGLKVLRKIEQIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ + +  E+  P V    LWQ++G WD++   +  +K ++D     R +   P +    
Sbjct: 60  EMNNINSMEVLMPAVQPAELWQETGRWDTFGGQLLTMKDSND-----REYCFGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT-KEQMFNE 403
             +  H L+SY++LP    +  + +R+E      G+MR R F   DA+ F    E + + 
Sbjct: 115 TDIMRHELQSYKQLPASFYQIQTKFRDEIRPRF-GVMRAREFIMKDAYSFHLNLESLQDT 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
              ++     I+   G +   V+  T       S   
Sbjct: 174 YKDMYQAYCRIFDRLGLKYRAVEADTGAIGGSASHEF 210



 Score = 81.0 bits (198), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 60/173 (34%), Gaps = 14/173 (8%)

Query: 484 KDAIGRDWQCGTI------QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
            D  G  + C  I      Q+        NA  +N   +    +++     G        
Sbjct: 393 PDGKGTLYSCRGIEVGHVFQLGDKYAKAMNAVVINEQGQLET-MLMGCYGLGITRVVAAA 451

Query: 538 MIENFKGNLPLWL---SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNET 590
           + ++      +W    +P Q ++  +    +    + A  +    K+  + +  D RNE 
Sbjct: 452 IEQHHDEKGIIWPQNIAPFQLVIIPLNAHRSPEVKKQADRLYEQFKNLSIDVLIDDRNER 511

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
                 +H +  IP  ++  D+   +  +  +   +   Q+ +L  A+  + K
Sbjct: 512 AGVLFADHDLIGIPHRLVVSDRNIEQNCVEYKSRATGEMQQFNLDTAVDSVLK 564


>gi|269214916|ref|ZP_05987412.2| proline--tRNA ligase [Neisseria lactamica ATCC 23970]
 gi|269208774|gb|EEZ75229.1| proline--tRNA ligase [Neisseria lactamica ATCC 23970]
          Length = 625

 Score =  145 bits (366), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 47/223 (21%), Positives = 84/223 (37%), Gaps = 11/223 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       E+    H+ + R      I  + SG+  W   G ++ + + + +R 
Sbjct: 58  ASQFFISTLKEAPAEAALASHKLMIRAG---LIKANASGLYTWMPMGLRVLRKVENVVRE 114

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E+  P V    LWQ+SG W  Y   +  +K   D     R F + P      
Sbjct: 115 EMARAGSVELLMPVVQPAELWQESGRWKFYGKELLRLKDRHD-----RDFCMGPTCEEVI 169

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP       + +R+E      G+MR R F   DA+ F          
Sbjct: 170 ADIVRKEVNSYKQLPKNFYHIQTKFRDEVRPRF-GVMRAREFVMKDAYSFHADYASLQTT 228

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
            + +++    I+   G     V   T      GS      AE+
Sbjct: 229 YQDMYDAYCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAES 271



 Score = 86.4 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 27/171 (15%), Positives = 65/171 (38%), Gaps = 9/171 (5%)

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           +   +  + R  + G +    +  ++        ++ K   + +     G I R +   I
Sbjct: 451 DGQARLKLARGIEVGHVFQLRDKYTKAMNVSFLDNNGKSQIMEMGCYGIG-ITRVVAAAI 509

Query: 540 E-NFKGNLPLW---LSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           E N      +W   ++P + ++  +    + +  E A +I   L +    +  D R+E  
Sbjct: 510 EQNNDEKGIIWTKAMAPFEVVIVPMNYKKSDTVREAADKIYAELLAAGADVLLDDRDERA 569

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
              + +  +  IP  I+ GD+   E ++          Q V++ + +  +T
Sbjct: 570 GVLLNDSELLGIPHRIVIGDRALKEGNVEYAERRENEAQAVAIGEIVARVT 620


>gi|218438508|ref|YP_002376837.1| prolyl-tRNA synthetase [Cyanothece sp. PCC 7424]
 gi|226699136|sp|B7K9K1|SYP_CYAP7 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|218171236|gb|ACK69969.1| prolyl-tRNA synthetase [Cyanothece sp. PCC 7424]
          Length = 600

 Score =  145 bits (366), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 57/243 (23%), Positives = 95/243 (39%), Gaps = 8/243 (3%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q           E+E   H+ L R   +  I   GSG+  +    W++ Q +   +R++
Sbjct: 4   SQMLFVTLREDPAEAEIPSHKLLLRAGYIRRI---GSGIYAYLPLMWRVLQKVSQIVRQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E   PQ+    LW++SG WD+Y      +   +D  +  R   L P +     
Sbjct: 61  MNATGAQECLLPQLQPSELWKESGRWDTYTKAEGIMFALED--RQERELGLGPTHEEVIT 118

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT-KEQMFNEC 404
            +    ++SYR+LPV L +  + +R+E      GLMR R F   DA+ F T  E +    
Sbjct: 119 FIAREMIRSYRQLPVNLYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSFDTDPEGLKKTY 177

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
             +     +I +  G     V   +      GS      A+     VL T        + 
Sbjct: 178 QDMDKAYRNILRRCGLAFRAVDADSGAIGGSGSQEFMVLADAGEDEVLYTDDGKYAANVE 237

Query: 465 TGV 467
             V
Sbjct: 238 KAV 240



 Score = 81.8 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 29/162 (17%), Positives = 63/162 (38%), Gaps = 9/162 (5%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I Q+         A Y N   E+  P+++     G        + +++  +  
Sbjct: 435 RGIEVGHIFQLGTKYSHAMGATYTNEQGEEM-PLVMGCYGIGVSRLAQSAVEQSYDKDGI 493

Query: 548 LWL---SPIQAIVTT---ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W    +P  AIV          VE A+++   L +  +    D R+E    K ++  + 
Sbjct: 494 IWPVAIAPYHAIVVIPNINDPQQVEVAEKLYTELNAAGIETLLDDRDERAGVKFKDSELV 553

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            IP  I+ G +   E  + +    +  +Q + + + +  + +
Sbjct: 554 GIPYRIVTG-RSLKEGKLEVVERATKKSQDIPIDEVVSTIQQ 594


>gi|40063052|gb|AAR37908.1| prolyl-tRNA synthetase [uncultured marine bacterium 560]
          Length = 567

 Score =  145 bits (366), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 50/250 (20%), Positives = 100/250 (40%), Gaps = 10/250 (4%)

Query: 238 LEESEKRDHRKLAREMDLFH--IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD-YEEI 294
             +    D + ++ ++ +    +++  SG+  +   G ++ Q +   +R ++     +E+
Sbjct: 10  TIKEAPNDAQIISHQLMIRAGLVSKLASGLYSYLPIGLRVIQKVEKIIREEMNKSLAQEL 69

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
             P      LWQ+SG W+ Y   +   K      +  R F L P +      +    L+S
Sbjct: 70  LMPVAQPAELWQESGRWEEYGPELLRFKD-----RHERDFCLGPTHEEVITNIAKQYLRS 124

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIIS 413
           Y++LP+   +  + +R+E      G+MR R F   DA+ F   E    E  + +H    +
Sbjct: 125 YKQLPINFYQIQTKFRDEIRPRF-GVMRSREFIMKDAYSFHIDEASLGETYQVMHQTYCN 183

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           I+   G E  +V   +       S      A++    +  + K+     I+    L +G 
Sbjct: 184 IFDRLGLEYKVVLADSGAIGGDSSHEFHVLADSGEDAICFSNKSDYAANIDRAETLPQGE 243

Query: 474 FYGPKFEYIL 483
              PK    +
Sbjct: 244 PEPPKETITV 253



 Score = 71.0 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 32/175 (18%), Positives = 61/175 (34%), Gaps = 13/175 (7%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
           P  +   K  I R  + G I Q+        NA  +    +    V ++   +G  + R 
Sbjct: 391 PSPDGKGKLEIKRGIEVGHIFQLGTKYSDAMNANVIGEDGKA---VNMNMGCYGIGVTRI 447

Query: 535 IGIMIENFKGN----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDF 586
           +   IE    +     P  ++P Q ++  I    +S   + A E+     S  + +  D 
Sbjct: 448 VAASIEQNHDDKGIIFPESIAPFQLVIVPINYNKSSRVRKLADELYEQFLSQGVEVLLDN 507

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           R E       +  +  IP  ++  D  A   +I  +        ++    AI  +
Sbjct: 508 RKERPGIMFADSELLGIPHRLVISDTHADSGNIEYKSRNEVDKIEIEFKAAIDFI 562


>gi|261405336|ref|YP_003241577.1| prolyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
 gi|261281799|gb|ACX63770.1| prolyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
          Length = 575

 Score =  145 bits (366), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 50/213 (23%), Positives = 89/213 (41%), Gaps = 11/213 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  +T       E+E   H+ + R   +   A    G+  +   GW++ + + + +R++
Sbjct: 4   SQLLMTTMRDVPSEAEALSHQWMLRGGYIRQTAA---GIYSYLPLGWRVLRKIETIIRQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E+  P V    LW++SG +D Y A +  +    D     R F L P +     
Sbjct: 61  MDAAGGQELLMPAVQPAELWKESGRYDVYGAELIRLYDRHD-----REFVLGPTHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
           ++    + SYR+LPV L +  S YR+E      GL+R R F   DA+ F    E +    
Sbjct: 116 SIVRQEISSYRKLPVNLYQIQSKYRDERRPRF-GLLRGREFLMKDAYSFDRDWEGLDASY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGS 437
             +++    I+   G     V+         G 
Sbjct: 175 RNMYDAYERIFSRCGLMFRAVEADAGAIGGQGE 207



 Score = 71.7 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 63/168 (37%), Gaps = 12/168 (7%)

Query: 487 IGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE----N 541
             R  + G +  +        N  Y+++   +  P+++     G   R +  + E    +
Sbjct: 408 FHRGIELGHVFKLGTKYSDAMNGKYLDADG-REKPLIMGCYGIGVS-RVMAAIAEQRISD 465

Query: 542 FKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
            +   P+ ++P +  +  +     + ++ A+ I   L    L    D R+E    K ++ 
Sbjct: 466 ERLVWPMSVAPFRVHIIPVAVKDETQMQLAEHIYRELSGAGLEPLLDDRDERAGVKFKDA 525

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
            +   P+ II G + A+   +            +   +AI    +E++
Sbjct: 526 DLAGAPLRIIVG-RGAASGEVEWMGEDGIKI-SMPAEEAIQRSREEAV 571


>gi|121716703|ref|XP_001275886.1| prolyl-tRNA synthetase [Aspergillus clavatus NRRL 1]
 gi|119404043|gb|EAW14460.1| prolyl-tRNA synthetase [Aspergillus clavatus NRRL 1]
          Length = 608

 Score =  145 bits (366), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 78/410 (19%), Positives = 150/410 (36%), Gaps = 67/410 (16%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRAN 317
            D SG        + I++ +  +   +IK    +  + P  + + + Q +  H + + A 
Sbjct: 112 YDVSGCFILKPASYSIWEEIQQWFNAEIKKIGVKNCSFPLFVSEDVLQREKDHIEGFAAE 171

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           +  V  A  T  + +  A++P +       +   ++S+R+LP++L ++ SV R E     
Sbjct: 172 VAWVTHAGSTPLEKK-IAIRPTSETVMYPYYAKWIRSHRDLPLKLNQWNSVVRWEFK-HP 229

Query: 378 HGLMRVRGFTQDDAHVFCTKEQMFN-ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
              +R R F   + H     E     E L I +L   IY++     ++    T  EK  G
Sbjct: 230 QPFLRTREFLWQEGHTAHLTEGAAREEVLHILDLYARIYEELLAVPVVKGQKTEKEKFAG 289

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
                                                 Y    E  +  A GR  Q GT 
Sbjct: 290 G------------------------------------LYTTTVEGYIP-ATGRGIQGGTS 312

Query: 497 Q-VDFNLPSRFNAFYVNSH---SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
             +  N    F     +      EK  P+ + +  +G   R +G+M+     N  L L P
Sbjct: 313 HGLGQNFSKMFGITVEDPSAKPEEKKPPLHVWQNSWGLSTRTLGVMVMIHSDNRGLVLPP 372

Query: 553 ----IQAIVTTIT--------SSAVEYAQE--IANLLKSHHLSIETDFRNE-TINYKIRE 597
                Q I+  +              YA+   + ++LK+  +  ++D R+  +  +K  +
Sbjct: 373 RVAETQTIIVPVGITAKTTEEDREKLYAEIDGLVSVLKAAGVRADSDKRDGYSPGWKFND 432

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRF---GSTTTQKVSLLD---AIPIL 641
             ++ +P+ I  G  E++ + +   R    G      + + +   A+P L
Sbjct: 433 WELRGVPLRIEFGPGESAGQFVTAARRDIPGKDGKSTIPIAELSTAVPAL 482


>gi|197334450|ref|YP_002155444.1| prolyl-tRNA synthetase [Vibrio fischeri MJ11]
 gi|226701355|sp|B5FBD6|SYP_VIBFM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|197315940|gb|ACH65387.1| prolyl-tRNA synthetase [Vibrio fischeri MJ11]
          Length = 571

 Score =  145 bits (366), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 61/330 (18%), Positives = 117/330 (35%), Gaps = 17/330 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R+
Sbjct: 3   TSKYLLSTLKETPNDAEVVSHQLMLRAGMIRRLA---SGLYTWLPTGLRVLRKVENIVRQ 59

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           +I      E   P V    LW+++G  +     +        T + +R F L P      
Sbjct: 60  EIDNAGAIETLMPVVQPFELWEETGRSEKMGPELLRF-----TDRHVRPFVLSPTAEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
            ++  + + SY++LP+ L +  + +R+E      G+MR R F   DA+ F    E +   
Sbjct: 115 TSLVRNEVSSYKQLPLNLYQIQTKFRDERRPRF-GVMRAREFCMMDAYSFDIDKEGLQKS 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +H+     +   G E   V   +      GS      AE+    +  + ++     I
Sbjct: 174 YDAMHDAYCKAFDRMGLEYRPVLADSGAIGGSGSQEFHVLAESGEDLIAFSTESDYAANI 233

Query: 464 NTGVLLGEGAFY-GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
                +   A    P  E    D          ++       +         S+     +
Sbjct: 234 EKAEAVAPTAERAAPTQEMTTVDTPNAKTIAELVEQHGIAIEKTVKTLFVKASDDVDADI 293

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
           I   + G  E     + E    NLP   SP
Sbjct: 294 IALIIRGDHE-----LNEVKAENLPQVASP 318



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 64/168 (38%), Gaps = 13/168 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           + R  + G I Q+        N   ++++ +    V++    +G  + R +   IE    
Sbjct: 405 LKRGIEVGHIFQLGTAYSEAMNCGVLDANGKN---VILEMGCYGIGVSRVVASAIEQNND 461

Query: 545 N----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                 P  ++P    +  +    +    E A+++   L +  + +  D R E      +
Sbjct: 462 EYGIVWPEAIAPFTVAIVPMNMHKSERVKEAAEKLYAELTAMGIEVLFDDRKERPGVMFK 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  +  IP  I+ GD+   E +   +   + T + V + + +  +  +
Sbjct: 522 DIELIGIPHTIVIGDRSMDEGNFEYKNRRANTKEAVEMANIVEHIKAQ 569


>gi|229513024|ref|ZP_04402490.1| prolyl-tRNA synthetase [Vibrio cholerae TMA 21]
 gi|229349917|gb|EEO14871.1| prolyl-tRNA synthetase [Vibrio cholerae TMA 21]
          Length = 600

 Score =  145 bits (366), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 47/249 (18%), Positives = 95/249 (38%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R+
Sbjct: 3   TSKYLLSTLKETPNDAEVVSHKLMLRAGMIRKLA---SGLYTWLPTGLRVLRKVENIVRQ 59

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           +I      E   P V    LW+++G  +     +        T +  R F L P      
Sbjct: 60  EIDNAGAIETLMPVVQPFELWEETGRSEKMGPELLRF-----TDRHERPFVLSPTAEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
            A+  + + SY++LP+ L +  + +R+E      G+MR R F   DA+ F   +    + 
Sbjct: 115 TALVRNEVSSYKQLPLNLYQIQTKFRDERRPRF-GVMRAREFCMMDAYSFDIDKAGLEKS 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            + +H      +   G +   V   T      GS      AE+    +  + ++     I
Sbjct: 174 YEAMHVAYCKAFDRMGLDYRPVLADTGAIGGNGSHEFHVLAESGEDLIAFSTESDYAANI 233

Query: 464 NTGVLLGEG 472
                +   
Sbjct: 234 EKAEAVAPA 242



 Score = 86.8 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/166 (17%), Positives = 64/166 (38%), Gaps = 13/166 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           + R  + G I Q+  N   + N   ++S+ +    V++    +G  + R +   IE    
Sbjct: 405 LKRGIEVGHIFQLGTNYSEKMNCGVLDSNGKN---VILEMGCYGIGVSRVVAAAIEQNHD 461

Query: 545 N----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +     P  ++P Q  +  +    +    + A+++   L +  + +  D R E       
Sbjct: 462 DYGIIWPDAIAPFQVAIVPMNMHKSERVQQAAEKLYAELTAAGIEVLFDDRKERPGVMFS 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +  +  +P  II GD+   E     +   S   + V++   I  + 
Sbjct: 522 DMELIGVPHTIIIGDRSMDEGHFEYKNRRSGEKEAVAMASIIDFIQ 567


>gi|226951685|ref|ZP_03822149.1| prolyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
 gi|294651367|ref|ZP_06728686.1| proline--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
 gi|226837601|gb|EEH69984.1| prolyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
 gi|292822769|gb|EFF81653.1| proline--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
          Length = 571

 Score =  145 bits (366), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 48/252 (19%), Positives = 99/252 (39%), Gaps = 13/252 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++           ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   ASRFLFATLRETPNDAEVISHQLMLRAGMIRKLA---SGLYSWLPMGTRVLKKVDAIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P      LW++SG ++ Y   +   K      +    F L P +    
Sbjct: 60  EMNRSGALEVFMPVTQPAALWEESGRFEQYGPELLRFKD-----RHNNDFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + LKSY++LP+   +  + +R+E      G+MR R F   DA+ F   ++   E 
Sbjct: 115 TDLARNELKSYKQLPLNFYQIQTKFRDEIRPRF-GVMRSREFIMKDAYSFHANQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +++    I+   G +   V+  T       S      A +    +  + ++     +
Sbjct: 174 YDVMYDTYSRIFSRLGLDFRPVQADTGSIGGSASHEFHVLAASGEDDIAFSTESDYAANV 233

Query: 464 N--TGVLLGEGA 473
                VL+GE A
Sbjct: 234 EMAEAVLVGERA 245



 Score = 90.2 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 57/167 (34%), Gaps = 13/167 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           I R  + G I Q+            +    +   P  +    +G  + R +   IE NF 
Sbjct: 408 IKRGIEVGHIFQLGTKYSEALGCKVLGEDGK---PFTVTMGCYGIGVTRVVAAAIEQNFD 464

Query: 544 GNLPLWL---SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
               +W    +P    +  +    +   VE A+ +   L++    +  D RNE    K  
Sbjct: 465 DKGIIWPQAIAPFDVAIVPMNAHKSPRTVEAAEALYAELQAQGYDVLLDDRNERPGVKFS 524

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  +  IP  I+ G+K     +   +         ++  +    L +
Sbjct: 525 DLELMGIPHRIVIGEKGLDAGTFEYKGRRDAEASNLNKEELFAKLVR 571


>gi|297202727|ref|ZP_06920124.1| prolyl-tRNA synthetase [Streptomyces sviceus ATCC 29083]
 gi|197713306|gb|EDY57340.1| prolyl-tRNA synthetase [Streptomyces sviceus ATCC 29083]
          Length = 567

 Score =  145 bits (366), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 53/323 (16%), Positives = 110/323 (34%), Gaps = 21/323 (6%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q           ++E   H+ L R   +   A    G+  W   G K+   +   +R +
Sbjct: 10  SQLMAKTLRDDPADAEVLSHKLLVRAGYVRRTAA---GIWSWLPLGKKVLANVERIVREE 66

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E+  P +L +  ++ +G WD Y   +F ++      +    + L P +     
Sbjct: 67  MDAIGAQEVLLPAILPREPYEATGRWDEYGPELFRLQD-----RKGGDYLLGPTHEEIFT 121

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +      SY++LPV L +    YR+E      G++R R F   D++ F T+++      
Sbjct: 122 LLVKDQASSYKDLPVILYQIQHKYRDEARPR-AGILRGREFLMKDSYSFDTEDEGLARSY 180

Query: 406 KIH-NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIK---NSSQD 461
            +H      +++  G +  +   +        S+     AE       D       ++ +
Sbjct: 181 ALHRQAYQKVFERLGLDYRICAATAGAMGGSKSEEFLAPAEAGEDTFADCPNCDFAANTE 240

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
            I   +   +        E    D      +     +     +      V    E     
Sbjct: 241 AITYELKPVDADGVAALEEIPTPDT--PTIETLAAHLGVEASATLKNLLVKVDGE----- 293

Query: 522 MIHRAVFGSIERFIGIMIENFKG 544
           ++   V G  E  +G +  +F  
Sbjct: 294 IVAVGVPGDREVDLGKVEAHFAP 316



 Score = 84.8 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 29/174 (16%), Positives = 67/174 (38%), Gaps = 12/174 (6%)

Query: 476 GPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
            PK    LK  + R  + G I Q+            +  + +     M    +   + R 
Sbjct: 398 CPKCGTGLK--LDRAIEIGHIFQLGRKYADALKLDVLGQNGKPVRVTMGSYGI--GVSRA 453

Query: 535 IGIMIENFKGNLPL-WLSPIQA----IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE 589
           +  + E    +  L W + +      +V    +  +E A +++  L+   L +  D R  
Sbjct: 454 VAALAEQTADDKGLCWPAEVAPADVHVVAAGKALQIELALDVSEKLREAGLRVLVDDRAG 513

Query: 590 -TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +   K  +  +  +P I++ G + A    + ++   +   +++++ +AI  LT
Sbjct: 514 VSPGVKFTDSELIGVPKILVAGRRSAE-GVLELKDRRTGEREELTVDEAIARLT 566


>gi|292670562|ref|ZP_06603988.1| proline-tRNA ligase [Selenomonas noxia ATCC 43541]
 gi|292647728|gb|EFF65700.1| proline-tRNA ligase [Selenomonas noxia ATCC 43541]
          Length = 570

 Score =  145 bits (366), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 50/221 (22%), Positives = 89/221 (40%), Gaps = 11/221 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            T            E+E   HR + R   +    +   G+  +    W+  + +   +R 
Sbjct: 3   ATNLYAPTLRNTPAEAEIASHRLMYRAGLIR---KSAGGMYTYLPLAWRTIRKIEEIIRA 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           +++    +EI  P +    LW++SG W +Y A M  +K   D     R F + P +    
Sbjct: 60  EMEAVGGQEIMMPILQPSELWEESGRWGAYGAEMIRIKDRHD-----REFCMGPTHEEMI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
            A+    L+SY++LPV L +    +R+E      G+MR R F   D + F    E M   
Sbjct: 115 TALVRDELRSYKQLPVLLYQIQDKFRDERRPRF-GIMRSREFIMQDLYSFDEDIEGMNES 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
             K++    +I+   G +  +V+  +       S+     A
Sbjct: 174 YRKMYAAYSNIFTRCGLDFRVVEADSGAIGGGRSEEFTVLA 214



 Score = 77.9 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 26/151 (17%), Positives = 51/151 (33%), Gaps = 8/151 (5%)

Query: 486 AIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
            I R  + G I  +        +A ++++   K  P+ +     G        + +N   
Sbjct: 402 HISRGIEAGQIFALGTKYSEAMDATFLDAAG-KAQPLQMGCYGIGVGRTMAAAIEQNHDD 460

Query: 545 NLPLWLSPIQAI------VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           +  +W   I         V       + YA+E+   L++  +    D R E    K  + 
Sbjct: 461 SGIIWPRAIAPYEVVVVAVNAKVPEQLAYAEEVYEELRAAGVDALLDDRRERAGVKFNDC 520

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
            +   P+ I  G K     SI ++   +   
Sbjct: 521 DLIGYPVRIAVGPKTIESGSIEVKLRRTGEL 551


>gi|150388509|ref|YP_001318558.1| prolyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
 gi|166980095|sp|A6TL31|SYP_ALKMQ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|149948371|gb|ABR46899.1| prolyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
          Length = 570

 Score =  145 bits (366), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 43/217 (19%), Positives = 88/217 (40%), Gaps = 12/217 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        E+E   H+ L R   +  +    +GV  +   G++  + +   +R +
Sbjct: 4   SKLYMPTLREVPSEAELPSHQLLLRAGMIRKL---VAGVYSYLPLGYRTLKKVEQIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E     +  + LW+ +G W +    M  +K      +  R F L P +     
Sbjct: 61  MDRAGAQEALMSALQPKELWEATGRWQAIGPEMMRLKD-----RHNREFCLGPTHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +  + LKSY++LP+ L +  + YR+E      GLMR R F   DA+ F   E+   +  
Sbjct: 116 DLVKNELKSYKQLPLNLYQIQTKYRDEKRPRF-GLMRSREFIMKDAYSFDKDEEGMKKSY 174

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWD 442
           +  ++     + F   ++  K+       +G     +
Sbjct: 175 E--DMWKGYERVFDRCELKYKVVEGDAGAMGDSESHE 209



 Score = 90.6 bits (223), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 35/166 (21%), Positives = 71/166 (42%), Gaps = 11/166 (6%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG- 544
           + R  + G I Q+D       NA +++ + ++ +  M    +   I R +  +IE +   
Sbjct: 404 LDRGIEVGNIFQLDMKYSKGLNATFLDENGKEQYFYMGSYGI--GIGRTMAAVIEQYHDE 461

Query: 545 ---NLPLWLSPIQAIVT---TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
                PL L+P Q +VT          E  ++I + L S  + +  D R E+   K ++ 
Sbjct: 462 KGIKWPLALAPYQVVVTIVNPNKDEQRELGEKIYSKLLSKGVEVLLDDRKESPGVKFKDA 521

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            +  IPI ++ G K A E  +      +   ++V   + + ++  +
Sbjct: 522 ELIGIPIRVVAG-KNAGENIVEFALRATDEKKEVEADEVVEMVMDQ 566


>gi|258405882|ref|YP_003198624.1| prolyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
 gi|257798109|gb|ACV69046.1| prolyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
          Length = 579

 Score =  145 bits (366), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 45/220 (20%), Positives = 87/220 (39%), Gaps = 11/220 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +   +        E+E   H+ L R   +  +    SG+  +   G +    +   +R +
Sbjct: 4   SNAYIPTLKEEPAEAEVVSHKLLVRAGMIRKV---TSGIYTFLPLGLRALDKIAHVVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +EI  P V    LW+++G W+ Y   +  +K   D     R + L P +     
Sbjct: 61  MNRAGCQEIFMPMVQPGDLWKETGRWEYYGKELLRLKDRHD-----RDYCLGPTHEEVVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           ++    ++SYR+LP+ L +  + +R+E      GLMR R F   DA+ F   E    +  
Sbjct: 116 SLVRGEVRSYRQLPLNLYQIQTKFRDEIRPRF-GLMRCREFIMKDAYSFDRDEAGAQKSY 174

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
           + + +     ++  G +   V+  +       S      A
Sbjct: 175 QTMFDAYTRAFQRLGLQFRAVEADSGAIGGSVSHEFMVLA 214



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 18/137 (13%), Positives = 48/137 (35%), Gaps = 8/137 (5%)

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIENFKG----NLPLWLSPIQAIVTTITSSAVEY- 567
             + K   +++     G   R +   IE          P  ++P +  +  + +   E  
Sbjct: 428 DENGKEREMVMGCYGIGVS-RILAAAIEQNHDASGIMFPPSIAPYEIALLCLDTKNEEVR 486

Query: 568 --AQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
             A+     L+   + +  D R E   +K ++  +  +P+ ++ G K  +   + ++   
Sbjct: 487 TKAEAFYETLQEQGVDVLYDDRVERPGFKFKDADLMGLPLQVVFGGKGVARGIVEVKDRR 546

Query: 626 STTTQKVSLLDAIPILT 642
           +    ++ L        
Sbjct: 547 TGEKAELPLDGLAEAFA 563


>gi|196019376|ref|XP_002118967.1| hypothetical protein TRIADDRAFT_9363 [Trichoplax adhaerens]
 gi|190577501|gb|EDV18547.1| hypothetical protein TRIADDRAFT_9363 [Trichoplax adhaerens]
          Length = 408

 Score =  145 bits (366), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 79/416 (18%), Positives = 154/416 (37%), Gaps = 31/416 (7%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +   L        E++   H+ + +      I +  SGV  W   G  +   L + +R +
Sbjct: 4   SNYLLPTTKDISSEAKLMSHKLMLKSGM---IKQSSSGVYSWLPLGLNVLNKLANLIRVE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT--FALKPMNCPG 343
           +   +  EI  P +    +W++SG           +K     IKD +   + L P     
Sbjct: 61  LNKINCHEIVLPSLQLLSIWEKSGRAV----EDSDMKSQIFHIKDQKQTAYVLPPSGEEA 116

Query: 344 HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFN 402
              +F   + SY+++   L +    +R+E     HG+MR + F   DA+ F   KE+   
Sbjct: 117 VAELFKSSVHSYKDVSKILYQITWKFRDEIRPR-HGVMRAKEFLMKDAYSFDVNKEKALI 175

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD- 461
              KI    + ++K  G   I V   T       S      ++   +  +   +  +   
Sbjct: 176 SYEKIFKAYLEVFKKIGLRVIPVLAPTGAMGGNYSHEFHVLSDKNGESTIYYQEELNNYL 235

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIG-------RDWQCGTI-QVDFNLPSRFNAFYVNS 513
           + +   L G   FY  + E  + D          +  + G +  +        N  Y +S
Sbjct: 236 KDDEFSLKGYEKFYAKEEEKHVVDDCKTLKIIKSKSIEVGHLFYLGTKYSKSLNCTYQDS 295

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTITSS---AVE 566
           + E   P M    +   + R I  +IE+   +     P  +SP +  +  I +      E
Sbjct: 296 NGELQFPEMGCYGI--GVTRLIAAIIESCHDDKGIIWPDAISPFKLAIINIKAEDSVCRE 353

Query: 567 YAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           ++ ++   L      +  D  N++   K  +  +  I + II G K A+ + + ++
Sbjct: 354 FSDKLYANLSGK-YDVLYDDTNKSPGKKFADMDLIGINLEIIIGPKHAANKKVELK 408


>gi|115388031|ref|XP_001211521.1| hypothetical protein ATEG_02343 [Aspergillus terreus NIH2624]
 gi|114195605|gb|EAU37305.1| hypothetical protein ATEG_02343 [Aspergillus terreus NIH2624]
          Length = 592

 Score =  145 bits (366), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 80/419 (19%), Positives = 156/419 (37%), Gaps = 68/419 (16%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRAN 317
            D SG        + I++ +  +    IK    +  + P  + + + Q +  H + + A 
Sbjct: 105 YDVSGCFILKPASYSIWEEIQQWFNTHIKKIGVKNCSFPLFVSEDVLQREKDHIEGFAAE 164

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           +  V  A  T  + +  A++P +       ++  ++S+R+LP+RL ++ SV R E     
Sbjct: 165 VAWVTHAGSTPLEKK-IAIRPTSETVMYPYYSKWIRSHRDLPLRLNQWNSVVRWEFK-HP 222

Query: 378 HGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
              +R R F   + H    T++    E + I +L   IY++     ++    T  EK  G
Sbjct: 223 QPFLRTREFLWQEGHTAHLTQDAAHEEVMYILDLYAKIYEELLAVPVVKGQKTEKEKFAG 282

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
                                                 Y    E  +  A GR  Q  T 
Sbjct: 283 G------------------------------------LYTTTVEGYIP-ATGRGIQGATS 305

Query: 497 Q-VDFNLPSRFNAFYVNSH---SEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPL 548
             +  N    FN    +      EK  P+ + +  +G   R +G+M+    +N    LP 
Sbjct: 306 HGLGQNFSKMFNITVEDPSAKGDEKKPPIHVWQNSWGLSTRTLGVMVMIHSDNHGLVLPP 365

Query: 549 WLSPIQAIVTTI------TSSAVE--YAQE--IANLLKSHHLSIETDFR-NETINYKIRE 597
            ++  Q ++  +      +    E  YA+   +  +L +  +   +D R   +  +K  +
Sbjct: 366 RVAETQVVIVPVGITAKTSDEEREKLYAEIDGLTTVLTAAGVRATSDMREGYSPGWKFND 425

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRF------GSTTTQKVSLLDAIPILTKESLPPDC 650
             ++ +P+ +  G  E++   +   R       G +T Q   L  A+P L  E++  D 
Sbjct: 426 WELRGVPLRLEFGPGESAGHFVTAARRDIPGREGKSTIQISDLSTAVPALL-ETIQKDL 483


>gi|328861737|gb|EGG10840.1| hypothetical protein MELLADRAFT_42095 [Melampsora larici-populina
           98AG31]
          Length = 486

 Score =  145 bits (366), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 71/442 (16%), Positives = 147/442 (33%), Gaps = 48/442 (10%)

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK 288
             +              H  L R   L    +  +G+  +     ++ + +   +R +++
Sbjct: 38  PTIKTQAQSDTSISSPGHHLLLRAGFLR---QSSTGIWNFLPNAIRVLKKVEDIVREEME 94

Query: 289 D-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
                E++   +    LW+ SG W++    +F +    D         L P +      +
Sbjct: 95  RIGASEVSLSHLQTSSLWKASGRWNTAGKELFRLSDRKDAH-----LLLAPTHEEEITQL 149

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
               + S ++LPVRL   G  YR+E      GL+R R F   D + F        E    
Sbjct: 150 VKLDVNSSKQLPVRLFHIGRKYRDELRPR-AGLLRSREFIMKDLYTFDLDRTKALETYSA 208

Query: 408 HN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
                  I K  G   ++ +  +       S     ++ +    V+   K          
Sbjct: 209 VQGAYEKILKRIGIPFVVAEADSGAIGGSQSHEYQFESPSGEDTVIKCTKCDYIAN---- 264

Query: 467 VLLGEGAFYGPKFEYIL---KDAIGRDWQCGTIQ-------VDFNLPSRFNAFYVNSHSE 516
           V L +     P  +      +  +G                   +L + +      +  +
Sbjct: 265 VELAKSVLVPPLSDVNALRCRSPLGSSKAIEVAHTFYLGTKYSSSLSATYKISDPKTGLQ 324

Query: 517 KCHPVMIHRAVFGSIERFIGIMIE----NFKGNLPLWLSPIQA-IVTTITSSAVEYAQEI 571
           K +P+ +     G I R +G + E          P+ ++P +  I+  +  +    +  I
Sbjct: 325 KENPLEMGCFGIG-ISRLMGAIAECSHTETGLRWPINVAPFKVCIIIPMQENDAGSSDLI 383

Query: 572 ANLLKSHHLSIE--------------TDFRNETINYKIREHSIKKIPIIIICGDKEASER 617
            ++ +     +E               D R + I +K+ +  +   PI+I+ G++    +
Sbjct: 384 KSVAQIIGREVESIKTKVGELKGEVLIDDRIQRIGWKLMDADLVGYPILIVLGNRWIKNQ 443

Query: 618 SIGIRRFGST---TTQKVSLLD 636
            I IR   +      + V L+D
Sbjct: 444 VIEIRDVKNGKVIELENVGLVD 465


>gi|238754780|ref|ZP_04616131.1| Prolyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
 gi|238706940|gb|EEP99306.1| Prolyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
          Length = 572

 Score =  145 bits (366), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 51/257 (19%), Positives = 101/257 (39%), Gaps = 25/257 (9%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTLKETPADAEVISHQLMLRAGMVRKLA---SGLYTWLPTGIRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E++ P V    LWQ+SG W+ Y   +       +     R F L P +    
Sbjct: 60  EMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGE-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLVRGEINSYKQLPLNFFQIQTKFRDEVRPRF-GVMRAREFLMKDAYSFHTTQESLQET 173

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
                +  +  + F    +  +        +G DA  +            + +S +D I 
Sbjct: 174 YDA--MYEAYNRIFSRMGLDFRPVLADTGSIGGDASHE---------FQVLADSGEDDIV 222

Query: 465 TGVLLGEGAFYGPKFEY 481
                  G+ Y    E+
Sbjct: 223 F----STGSDYAANIEF 235



 Score = 86.4 bits (212), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 27/168 (16%), Positives = 56/168 (33%), Gaps = 13/168 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           I R  + G I Q+         A             ++    +G  + R +   IE    
Sbjct: 405 IKRGIEVGHIFQLGTKYSEAMKATVQGEDG---RNQVMAMGCYGIGVSRVVAAAIEQNHD 461

Query: 545 N----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +     P  ++P Q  +  +         E A+E+   L++  + +  D R E       
Sbjct: 462 DRGIIWPDAIAPFQVAILPMNMHKSFRVKELAEELYATLRTKGIEVILDDRKERPGVMFA 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  +  +P  I+ GD+      +  +   +   Q +   + I  L  +
Sbjct: 522 DMELIGVPHNIVIGDRNLDSEEVEYKNRRTGEKQMIKTSEIIEFLLSQ 569


>gi|237743345|ref|ZP_04573826.1| prolyl-tRNA synthetase [Fusobacterium sp. 7_1]
 gi|229433124|gb|EEO43336.1| prolyl-tRNA synthetase [Fusobacterium sp. 7_1]
          Length = 567

 Score =  145 bits (366), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 57/246 (23%), Positives = 99/246 (40%), Gaps = 11/246 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  +       +E+E   H+ + R   +  +A   SG+  +   G++  + + + +R 
Sbjct: 3   FSKAYIKTLKETPKEAEIASHKLMLRAGMIKKLA---SGIYAYLPLGYRTIRKIENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LWQ+SG WD     M  +K      +  R F L P      
Sbjct: 60  EMDRAGALELLMPVVQPAELWQESGRWDVMGPEMLRLKD-----RHERDFVLSPTQEEMI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
            A+    + SY+ LP+ L    + +R+E      GLMR R FT  DA+ F T  E +  E
Sbjct: 115 TAIVRSDISSYKSLPINLYHIQTKFRDERRPRF-GLMRGREFTMKDAYSFHTSQESLDEE 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            L + +    I+   G +   V   +      GS      AE+    ++ +  +     I
Sbjct: 174 FLNMRDAYTRIFTRCGLKFRPVDADSGNIGGSGSQEFQVLAESGEDEIIYSDGSEYAANI 233

Query: 464 NTGVLL 469
            T V  
Sbjct: 234 ETAVSE 239



 Score = 84.8 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 29/162 (17%), Positives = 65/162 (40%), Gaps = 9/162 (5%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  +CG I  +        NA Y++   +  + +++     G        + +    N  
Sbjct: 403 RGIECGQIFKLGDKYSKAMNATYLDEKGQSHY-MLMGCYGIGVTRTMAAAIEQYNDENGI 461

Query: 548 LWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W    +P    V  +     + V  A++I N L+   + +  D R+E   +K ++  + 
Sbjct: 462 IWPVSIAPYIVDVIPVNIKNEAQVNLAEKIYNNLQEEKIDVMLDDRDEKPGFKFKDADLI 521

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             P  ++ G K A E  + ++   +  T ++S  + I  + +
Sbjct: 522 GFPFKVVVGKK-AEEGIVELKIRKTGETFEISQNEIINKIKE 562


>gi|302754528|ref|XP_002960688.1| hypothetical protein SELMODRAFT_74713 [Selaginella moellendorffii]
 gi|300171627|gb|EFJ38227.1| hypothetical protein SELMODRAFT_74713 [Selaginella moellendorffii]
          Length = 495

 Score =  145 bits (366), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 60/395 (15%), Positives = 137/395 (34%), Gaps = 61/395 (15%)

Query: 260 EDGSGVIFWHRKGWKIFQT-------LISYMRRKIKD-DYEEINTPQVLDQHLW-QQSGH 310
            D SG        + I+         L  ++  +IK+   E    P  + +     +  H
Sbjct: 49  YDISGCYILLPWSYAIWDVTLFLLSFLQRFLDGEIKNLGVENAYFPLFVSERALVTEKKH 108

Query: 311 WDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYR 370
            + +   +  V  + ++  ++   A++P +      +F   ++ +R+LP ++ ++ +V R
Sbjct: 109 VEGFAPEVAWVTKSGESALEV-PIAIRPTSETVMYPIFAKRIRGHRDLPFKINQWCNVVR 167

Query: 371 NEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
            E        +R R F   + H  + TK++   E   + +L   +Y++            
Sbjct: 168 WEFKHPT-PFIRSREFLWQEGHTAYATKKEADEEVYAVLDLYRRVYEEL----------- 215

Query: 430 RPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGR 489
                                    +       + + V    G  Y    E  +    GR
Sbjct: 216 -------------------------LAIPVIKGVKSEVEKFAGGLYTTTVEAFIP-LTGR 249

Query: 490 DWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPL 548
             Q  T   +  N    F+  + +   E+     + +  +G   R IG+MI     +   
Sbjct: 250 GIQGATSHCLGQNFAEMFDIVFEDEKRERKK---VWQNSWGLTTRTIGVMIMVHGDDKVP 306

Query: 549 WLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIII 607
           +           T    + A   A  LK+  L ++ D R+  +  +K     +K +P+ +
Sbjct: 307 YKD-------VDTQKLFDAAASTARQLKAAGLRVKEDTRDNYSPGWKYSNWELKGVPLRV 359

Query: 608 ICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             G ++ +   + + R  +   + V +   +  ++
Sbjct: 360 EIGPRDLANSQVRVVRRDTGAKEDVPMDKIVDRIS 394


>gi|319788986|ref|YP_004150619.1| prolyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
 gi|317113488|gb|ADU95978.1| prolyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
          Length = 568

 Score =  145 bits (366), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 52/207 (25%), Positives = 85/207 (41%), Gaps = 11/207 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +  +A     +      G ++ + +   +R++++    +E+  P 
Sbjct: 17  DAEIPSHKLLVRAGFIRKVASGLYDI---LPLGARVIRKIEQVIRQEMERAGAQEVILPI 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG WD Y   M   K      +  R +AL P        +    +KSY+EL
Sbjct: 74  MHPAELWQESGRWDVYGKEMIKFKD-----RHERDYALGPTAEEMITDLVRKEVKSYKEL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKD 417
           P+ L + G  +R+E      GLMR R F   DA+ F  + E    E   +      I+K 
Sbjct: 129 PLNLYQIGRKFRDEIRPRF-GLMRSREFIMKDAYSFHASDEDAEREYWNMFETYSRIFKR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDA 444
            G E   V+  T       S      A
Sbjct: 188 LGLEFKAVEADTGEIGGSFSHEFMVIA 214



 Score = 92.9 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 61/163 (37%), Gaps = 9/163 (5%)

Query: 488 GRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNL 546
            R  + G I  +         A +V+    +  P+++     G        + +    N 
Sbjct: 403 KRGIEVGHIFKLGTKYSEAMGATFVDEQGNEK-PMVMGCYGIGVTRVMAAAVEQGHDENG 461

Query: 547 PLWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
            +W    +P + IV  +       VE A+ + + L      +  D RN    +K ++  +
Sbjct: 462 IIWPVEIAPFEVIVIPVNVKKEEIVEAAERVYSELMEAGFDVLLDDRNARPGFKFKDADL 521

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             IP  +I G K ASE  + ++   S    ++ +   +  L +
Sbjct: 522 IGIPYQVIVGKK-ASEGVVELKIRRSGERLELPVDGVVGKLRE 563


>gi|301065031|ref|ZP_07205376.1| proline--tRNA ligase [delta proteobacterium NaphS2]
 gi|300440880|gb|EFK05300.1| proline--tRNA ligase [delta proteobacterium NaphS2]
          Length = 575

 Score =  145 bits (366), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 45/243 (18%), Positives = 93/243 (38%), Gaps = 11/243 (4%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
           +        ++E   H+ + R   +  +    SG+  +   G K  + + + +R ++   
Sbjct: 8   IPTKKEIPADAEIISHQLMIRAGMIRKL---TSGIYTYLPVGLKSIRKVENIVREEMNRA 64

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
              E+  P V    LWQ+SG W+ Y   +   K   D     R   + P +      +  
Sbjct: 65  GAIEVLMPAVQPAELWQESGRWEYYGRELLRFKDRHD-----RDACMGPTHEEVITDLVR 119

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IH 408
             + SY+++P+ L +  + +R+E      G+MR R F   DA+ F   E   N   + ++
Sbjct: 120 KEIHSYKQMPINLYQIQTKFRDEIRPRF-GIMRGREFIMKDAYSFDVDEAGANRSYEAMY 178

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
                I++  G +   V+  +       S      A++    +++    S    +    +
Sbjct: 179 EAYERIFQRCGLKFRAVEADSGTIGGSYSHEFMVLADSGEDQIVNCATCSYAANLERAEV 238

Query: 469 LGE 471
             E
Sbjct: 239 KAE 241



 Score = 81.0 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 58/166 (34%), Gaps = 10/166 (6%)

Query: 486 AIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           + GR  + G +  +         A ++N    K  P+++     G I R +   IE    
Sbjct: 402 SFGRGIEVGHVFKLGVKYSEAMKALFLNEQG-KELPMIMGCYGIG-IGRTVAAAIEQNHD 459

Query: 545 N----LPLWLSPIQAIVTT---ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
                 P+ ++P +  +          V  A +I   L    +    D R+E    K  +
Sbjct: 460 ENGIVFPIPVAPFEVSILPLQMHNDHVVNAADKIYEELMKSGIDALLDDRDERAGVKFND 519

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             +  IP+ I  G +      + ++      +  V L +A   + K
Sbjct: 520 ADLLGIPVRITVGSRGLKNGEVEVKLRSEAESFTVPLDNAAIAIGK 565


>gi|281419389|ref|ZP_06250404.1| prolyl-tRNA synthetase [Clostridium thermocellum JW20]
 gi|281407009|gb|EFB37272.1| prolyl-tRNA synthetase [Clostridium thermocellum JW20]
          Length = 572

 Score =  145 bits (366), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 50/216 (23%), Positives = 90/216 (41%), Gaps = 11/216 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +            E+E   H+ + R   +  +A   SG+  +   G+++F+ +   +R +
Sbjct: 4   SNMFFQTLREVPAEAEIASHQLMLRAGLMRKLA---SGIYSFLPLGYRVFRKIEQIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E+    +L    +Q SG W+ + A MF +K      ++ R F L P +     
Sbjct: 61  MDRAGAQELIMSALLPAESYQASGRWEVFGAEMFRLKD-----RNGRDFCLGPTHEEIFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
                  +SYR LP+ L +  + YR+E      G+MR R F   DA+ F   E   +   
Sbjct: 116 ETVKSVTRSYRSLPLILYQIQTKYRDERRPRF-GVMRSREFVMKDAYSFDRDEAGLDISY 174

Query: 406 -KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            K+++    I+   G + I+V   T      GS   
Sbjct: 175 KKMYDAYCRIFDRLGLDYIIVDADTGAMGGSGSQEF 210



 Score = 91.0 bits (224), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 65/175 (37%), Gaps = 9/175 (5%)

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
            PK    +K   G +      ++        +  Y++    K  P+++     G      
Sbjct: 394 CPKCGAPVKVEFGIEV-GHIFKLGTKYSEALDCIYLDETG-KERPMIMGCYGIGINRSMA 451

Query: 536 GIMIENFKGNLPLWL---SPIQAIVTTITSS---AVEYAQEIANLLKSHHLSIETDFRNE 589
            ++ +N   N  +W    +P   IV  + ++    +E A++I   L    + +  D R+E
Sbjct: 452 AVIEQNNDENGIIWPISIAPYHVIVIPVNTTDSVQMELAEKIYTQLGEMGIEVLLDDRDE 511

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
               K ++  +  IPI I  G + A E  +  +         +   +AI    KE
Sbjct: 512 RPGVKFKDADLIGIPIRITVGKR-AGEGIVEYKLRREKDFAAIPYEEAIAKAKKE 565


>gi|256028463|ref|ZP_05442297.1| prolyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289766384|ref|ZP_06525762.1| prolyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289717939|gb|EFD81951.1| prolyl-tRNA synthetase [Fusobacterium sp. D11]
          Length = 567

 Score =  145 bits (366), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 57/246 (23%), Positives = 99/246 (40%), Gaps = 11/246 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  +       +E+E   H+ + R   +  +A   SG+  +   G++  + + + +R 
Sbjct: 3   FSKAYIKTLKETPKEAEIASHKLMLRAGMIKKLA---SGIYAYLPLGYRTIRKIENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LWQ+SG WD     M  +K      +  R F L P      
Sbjct: 60  EMDRAGALELLMPVVQPAELWQESGRWDVMGPEMLRLKD-----RHERDFVLSPTQEEMI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
            A+    + SY+ LP+ L    + +R+E      GLMR R FT  DA+ F T  E +  E
Sbjct: 115 TAIVRSDISSYKSLPINLYHIQTKFRDERRPRF-GLMRGREFTMKDAYSFHTSQESLDEE 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            L + +    I+   G +   V   +      GS      AE+    ++ +  +     I
Sbjct: 174 FLNMRDAYTRIFTRCGLKFRPVDADSGNIGGSGSQEFQVLAESGEDEIIYSDGSEYAANI 233

Query: 464 NTGVLL 469
            T V  
Sbjct: 234 ETAVSE 239



 Score = 84.8 bits (208), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 29/162 (17%), Positives = 65/162 (40%), Gaps = 9/162 (5%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  +CG I  +        NA Y++   +  + +++     G        + +    N  
Sbjct: 403 RGIECGQIFKLGDKYSKAMNATYLDEKGQSHY-MLMGCYGIGVTRTMAAAIEQYNDENGI 461

Query: 548 LWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W    +P    V  +     + V  A++I N L+   + +  D R+E   +K ++  + 
Sbjct: 462 IWPVSIAPYIVDVIPVNIKNEAQVNLAEKIYNNLQEEKIDVMLDDRDEKPGFKFKDADLI 521

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             P  ++ G K A E  + ++   +  T ++S  + I  + +
Sbjct: 522 GFPFKVVVGKK-AEEGIVELKIRKTGETFEISQNEIINKIKE 562


>gi|209694468|ref|YP_002262396.1| prolyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
 gi|226731423|sp|B6EHZ8|SYP_ALISL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|208008419|emb|CAQ78577.1| prolyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
          Length = 571

 Score =  145 bits (366), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 62/330 (18%), Positives = 117/330 (35%), Gaps = 17/330 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R+
Sbjct: 3   TSKYLLSTLKETPNDAEVVSHQLMLRAGMIRRLA---SGLYTWLPTGLRVLRKVENIVRQ 59

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           +I      E   P V    LW+++G  +     +        T +  R F L P      
Sbjct: 60  EIDNAGAIETLMPVVQPFELWEETGRSEEMGPELLRF-----TDRHARPFVLSPTAEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
            ++  + + SY++LP+ L +  + +R+E      G+MR R F   DA+ F    E +   
Sbjct: 115 TSLVRNEVNSYKQLPLNLYQIQTKFRDERRPRF-GVMRAREFCMMDAYSFDIDKEGLQKS 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +H+     +   G E   V   +      GS      AE+    +  + ++     I
Sbjct: 174 YDAMHDAYCRAFDRMGLEYRPVLADSGAIGGSGSQEFHVLAESGEDLIAFSTESDYAANI 233

Query: 464 NTGVLLGEGAFY-GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
                L        P  E    D          ++       +         S++    +
Sbjct: 234 EKAEALAPTTERAAPTQEMTTVDTPNAKTIAELVEQHGIAIEKTVKTLFVKASDEVDADI 293

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
           I   + G  E     + E    NLP  LSP
Sbjct: 294 IALIIRGDHE-----LNEVKAENLPHVLSP 318



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 23/168 (13%), Positives = 63/168 (37%), Gaps = 13/168 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           + R  + G I Q+        N   ++++ +     ++    +G  + R +   IE    
Sbjct: 405 LKRGIEVGHIFQLGTAYSEAMNCGVLDANGKNS---ILEMGCYGIGVSRVVASAIEQNND 461

Query: 545 N----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                 P  L+P    +  +    +    E A+++   L +  + +  D R E      +
Sbjct: 462 EYGIVWPEALAPFTVAIVPMNMYKSDRVKEAAEKLYAELTAMGIDVLFDDRKERPGVMFK 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  +  IP  ++ GD+   E +   +   + + + + + + +  +  +
Sbjct: 522 DIELIGIPHTVVIGDRSMDEGNFEYKNRRANSKEVIEIANIVEHIKAQ 569


>gi|238751425|ref|ZP_04612917.1| Prolyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
 gi|238710292|gb|EEQ02518.1| Prolyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
          Length = 572

 Score =  145 bits (366), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 49/248 (19%), Positives = 96/248 (38%), Gaps = 11/248 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGVRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E++ P V    LWQ+SG W+ Y   +       +     R F L P +    
Sbjct: 60  EMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGE-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLIRGEINSYKQLPLNFFQIQTKFRDEVRPRF-GVMRAREFLMKDAYSFHTTQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I++        V   T       S      AE+    ++ +  +     I
Sbjct: 174 YDAMYAAYSKIFERMDLNFRAVLADTGSIGGSASHEFQVLAESGEDDIVFSTDSDYAANI 233

Query: 464 NTGVLLGE 471
                L  
Sbjct: 234 EFAEALAP 241



 Score = 86.4 bits (212), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/165 (18%), Positives = 57/165 (34%), Gaps = 13/165 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           I R  + G I Q+         A             ++    +G  + R +   IE N+ 
Sbjct: 405 IKRGIEVGHIFQLGTKYSEAMKATVQGEDG---RNQVMTMGCYGIGVSRVVAAAIEQNYD 461

Query: 544 GNLPLWL---SPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
               +W    +P Q  +  +         E A+E+   L+SH + +  D R E       
Sbjct: 462 DRGIIWPDAIAPFQVAILPMNMHKSFRVKELAEELYATLRSHGIDVILDDRKERPGVMFA 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           +  +  +P  I+ GD+      +  +   +   Q +   + I  L
Sbjct: 522 DMELIGVPHNIVIGDRNLDSEEVEYKNRRAGEKQMIKTSEIIDFL 566


>gi|288575624|ref|ZP_05977335.2| proline--tRNA ligase [Neisseria mucosa ATCC 25996]
 gi|288567367|gb|EFC88927.1| proline--tRNA ligase [Neisseria mucosa ATCC 25996]
          Length = 581

 Score =  145 bits (366), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 46/229 (20%), Positives = 84/229 (36%), Gaps = 12/229 (5%)

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFH----IAEDGSGVIFWHRKGWKIFQTL 279
            +  +  +    +F+   ++           L      I  + SG+  W   G ++ + +
Sbjct: 5   FYTEKHTMKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMPMGLRVLRKV 64

Query: 280 ISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKP 338
            + +R ++ +    E+  P V    LWQ+SG W+ Y   +  +K   D     R F + P
Sbjct: 65  ENVVREEMARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHD-----RDFCMGP 119

Query: 339 MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE 398
                   +    + SY++LP       + +R+E      G+MR R F   DA+ F    
Sbjct: 120 TCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEVRPRF-GVMRAREFVMKDAYSFHADY 178

Query: 399 QMFNECLK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
                    +++    I+   G E   V   T      GS      AE+
Sbjct: 179 ASLQTTYDAMYDAYCRIFTRLGLEFRPVAADTGSIGGTGSHEFQVLAES 227



 Score = 82.9 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 32/165 (19%), Positives = 59/165 (35%), Gaps = 12/165 (7%)

Query: 484 KDAIGRDWQCGTIQVDFNLPSR---FNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMI 539
            D  GR      I+V      R     A  V+         ++    +G  I R +   I
Sbjct: 406 PDGQGRLKLARGIEVGHVFQLRDKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAI 465

Query: 540 E-NFKGNLPLW---LSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           E N      +W   ++P + ++  +    + +  E A +I   L +    +  D R+E  
Sbjct: 466 EQNNDEKGIIWTKAMAPFEVVIVPMNYKKSDAVREAADKIYAELLAAGADVLLDDRDERA 525

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
              + +  +  IP  I+ GD+   E ++          Q V L +
Sbjct: 526 GVLLNDSELLGIPHRIVIGDRALKEGNVEYAERRDNQAQTVGLNE 570


>gi|77360564|ref|YP_340139.1| prolyl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
 gi|76875475|emb|CAI86696.1| prolyl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
          Length = 544

 Score =  145 bits (366), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 46/218 (21%), Positives = 86/218 (39%), Gaps = 8/218 (3%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYR 315
            I    SG+  W   G ++ + + + +R ++   +  E+  P +    LW++SG WD + 
Sbjct: 1   MIRRVASGLYTWLPTGLRVLRKVENIVREEMNKANAIEMLMPVIQPADLWEESGRWDEFG 60

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
             +        T +  RTFAL P +           + SY++LP+ L +  +  R+E   
Sbjct: 61  PELMRF-----TDRHNRTFALGPTHEEVITDFVRKEISSYKQLPISLYQIQTKVRDERRP 115

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              G+MR R FT  DA+ F   ++  +   + +H    +I++    +   V   T     
Sbjct: 116 RF-GVMRAREFTMKDAYSFHLSDECLDATYQVMHKAYCNIFERLNLDYRPVIADTGSIGG 174

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
             S      AE+    +  +  +     I     L   
Sbjct: 175 SVSHEFHVLAESGEDAIAFSDGSDYAANIEKAEALAPS 212



 Score = 79.4 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/166 (16%), Positives = 55/166 (33%), Gaps = 13/166 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           I R  + G I Q+         A  +N   +     ++    +G  + R +   IE    
Sbjct: 377 IKRGIEVGHIFQLGTKYSQAMKAGVLNESGKNQ---IMTMGCYGIGVSRIVAAAIEQNND 433

Query: 545 NLPL-WLSPIQAIVTTITSSAV-------EYAQEIANLLKSHHLSIETDFRNETINYKIR 596
              + W  PI      I    +       + A  +   LK   L +  D R E       
Sbjct: 434 QYGIIWPQPIAPFDLAIVPMNMHKSHRIPDIATNLYQGLKDAGLDVLFDDRKERPGVMFN 493

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +  +  +P  ++ G++   E  + ++   +     + +  AI  + 
Sbjct: 494 DMELIGVPFTLVIGERNLDENKVELKNRRTGEKLMIDIDTAIDAIK 539


>gi|290473678|ref|YP_003466550.1| proline tRNA synthetase [Xenorhabdus bovienii SS-2004]
 gi|289172983|emb|CBJ79754.1| proline tRNA synthetase [Xenorhabdus bovienii SS-2004]
          Length = 573

 Score =  145 bits (366), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 61/330 (18%), Positives = 124/330 (37%), Gaps = 17/330 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R      +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTLKETPADAEVVSHKLMLRAGMTRKLA---SGLYNWMPTGVRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E++ P V    LWQ+SG W+ Y   +   +         R F L P +    
Sbjct: 60  EMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFEDRG-----ARPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + + SY++LP+ L +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLVRNEVTSYKQLPLNLFQIQTKFRDEVRPRF-GVMRSREFIMKDAYSFHTSQESLQET 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             K+++    I+   G +   V   T       S      A++    +  + +++    I
Sbjct: 174 YDKMYDAYSKIFTRIGLDFRAVLADTGSIGGSASHEFQVLADSGEDDIAFSTESNYAANI 233

Query: 464 NTGVLLGEGAFYG-PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
                +        P  +  L +          ++       +     +   +++    +
Sbjct: 234 ELAEAVMPSHERAVPSEDMHLVETPNAKTIAELVEQFNLPIEKTVKTLIVHAAKESSHQL 293

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
           +   V G  E     + E     LPL  SP
Sbjct: 294 VALLVRGDHE-----LNEIKAEKLPLVASP 318



 Score = 91.8 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 60/168 (35%), Gaps = 13/168 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           I R  + G I Q+         A   N      H  ++    +G  + R +   IE    
Sbjct: 405 IKRGIEVGHIFQLGTKYSDALKATVQNEDG---HNQVVSMGCYGIGVTRIVAAAIEQNHD 461

Query: 545 N----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +     P  ++P Q  +  +         E A+++   L+++ + +  D R E       
Sbjct: 462 DRGIIWPDAIAPFQVALLPMNMHKSYRVKEVAEKLYADLRANGIDVIFDDRKERPGVMFA 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  +  +P  ++ GD+      +  +   +   Q + L   I  L ++
Sbjct: 522 DMELIGVPHTLVIGDRNLDNGEVEYKYRRNGDKQMLKLEGIIEYLKEQ 569


>gi|309378830|emb|CBX22535.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 570

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 48/223 (21%), Positives = 85/223 (38%), Gaps = 11/223 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       E     H+ + R      I  + SG+  W   G ++ + + + +R 
Sbjct: 3   ASQFFISTLKEAPAEVALASHKLMIRAG---LIKANASGLYTWMPMGLRVLRKVENVVRE 59

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E+  P V    LWQ+SG W+ Y   +  +K   D     R F + P      
Sbjct: 60  EMARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHD-----RDFCMGPTCEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP       + +R+E      G+MR R F   DA+ F T        
Sbjct: 115 ADIVRKEVNSYKQLPKNFYHIQTKFRDEVRPRF-GVMRAREFVMKDAYSFHTDYASLQTT 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
            + +++    I+   G     V   T      GS      AE+
Sbjct: 174 YQDMYDAYCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAES 216



 Score = 85.2 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 63/171 (36%), Gaps = 12/171 (7%)

Query: 484 KDAIGRDWQCGTIQVDFNLPSR---FNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMI 539
            D  GR      I+V      R     A  V+         ++    +G  I R +   I
Sbjct: 395 PDGQGRLKLARGIEVGHVFQLRDKYTKAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAI 454

Query: 540 E-NFKGNLPLW---LSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           E N      +W   ++P + ++  +    + +  E A +I   L +    +  D R+E  
Sbjct: 455 EQNNDEKGIIWTKAMAPFEVVIVPMNYKKSDTVREAADKIYAELLAAGADVLLDDRDERA 514

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
              + +  +  IP  I+ GD+   E ++          Q V++ + +  +T
Sbjct: 515 GVLLNDSELLGIPHRIVIGDRALKEGNVEYAERRENEAQAVAIGEIVARVT 565


>gi|94676512|ref|YP_589036.1| prolyl-tRNA synthetase [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
 gi|114152171|sp|Q1LSM8|SYP_BAUCH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|94219662|gb|ABF13821.1| prolyl-tRNA synthetase [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
          Length = 557

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 47/212 (22%), Positives = 91/212 (42%), Gaps = 12/212 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G +I + + + +R 
Sbjct: 3   TSQYLLSTIKEIPLDAEVISHQLMLRAGIIRQLA---SGLYTWLPTGLRILRKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E++ P V   +LW +SG W  Y   +        T +  R F L P +    
Sbjct: 60  EMNNIGAIEVSMPIVQPANLWLESGRWGQYGPELLRF-----TDRSTRQFLLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + +KSY++LP+ L +  + +R+E     +G+MR R F   DA+ F T +Q     
Sbjct: 115 TDLIRNEVKSYKQLPLNLFQIKTKFRDEVRPR-YGVMRSREFIMKDAYSFHTSQQSLQAT 173

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
             +  +  +    F    + V+        +G
Sbjct: 174 YDL--MYYTYNTIFNRIGLDVRTVQADPGSIG 203



 Score = 45.9 bits (107), Expect = 0.019,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 61/195 (31%), Gaps = 18/195 (9%)

Query: 455 IKNSSQDRINTGV---LLGEGAFYGPKFEYILKDAIGR--DWQCGTI-QVDFNLPSRFNA 508
           I       IN      L                  + R    + G I Q+         A
Sbjct: 353 IDGKYFFGINWERDLSLPEVANLTNQNISVSQPQRLHRTNWIEVGHIFQLGSKYSKVMKA 412

Query: 509 FYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGNL----PLWLSPIQAIVTTITSS 563
                       +++    +G  I R +   I+ +        P+ ++P Q  +  I   
Sbjct: 413 TVQGEDGNN---MIMTMGCYGIGITRVVAAAIDKYNDKQGLLLPVSIAPFQVAIIPINLH 469

Query: 564 ----AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSI 619
                   A+++ N L    + +  D R E       +  +  IP III GD+  + + I
Sbjct: 470 KSLLVQTVAEQLYNQLSIRKIDVLLDDRKERPGVMFADIELIGIPHIIIIGDRNLAVQKI 529

Query: 620 GIRRFGSTTTQKVSL 634
             +   +   + ++L
Sbjct: 530 EYKNRSNGEKKLMNL 544


>gi|257792203|ref|YP_003182809.1| prolyl-tRNA synthetase [Eggerthella lenta DSM 2243]
 gi|257476100|gb|ACV56420.1| prolyl-tRNA synthetase [Eggerthella lenta DSM 2243]
          Length = 578

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 48/228 (21%), Positives = 87/228 (38%), Gaps = 11/228 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q           ++E   HR L R   +   A   SGV  +   G ++   + + +R +
Sbjct: 4   SQLYAPTLKEDPADAEIASHRLLLRAGFIRKTA---SGVYTFLPLGKRVLAKVENIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +EI  P +    LW +SG W+ Y   +  +    D     R F L P +     
Sbjct: 61  MDGIGAQEIMMPALQPGELWHESGRWNDYGPELMRLVDRHD-----REFCLGPTHEELIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           ++  + L+SY+ELP+ L +    +R+E      GL+R R F   DA+ F   ++   +  
Sbjct: 116 SLVRNELRSYKELPLSLYQIQVKFRDEIRPRF-GLLRSREFIMKDAYSFHADQESLQKTY 174

Query: 406 -KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
             +      I    G +   V+          +      AE     ++
Sbjct: 175 DDMSEAYGRICDRMGMDYRPVEADPGQIGGSVTCEFMALAEAGEAELV 222



 Score = 92.2 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 63/182 (34%), Gaps = 11/182 (6%)

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
           V  G+     P     L  A G +      Q+         A ++     +  P ++   
Sbjct: 381 VQPGDS---CPSCGLPLDGARGIEVS-QVFQLGDKYSKAMGATFMAEDGSEQ-PFLMGCY 435

Query: 527 VFGSIERFIGIMIENFKGNLPLWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHL 580
             G       I+ ++   N  +W    +P    V  +T         A+++A+ L    L
Sbjct: 436 GVGISRTMAAIVEQHNDENGIMWPLTVAPAHVCVIPLTVGDDEVQPAAEKLASDLAKLGL 495

Query: 581 SIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
            +  D R E    K  +  +   P+ +I G +  +E+ + I+R  +   + + L      
Sbjct: 496 EVVIDDRKERAGVKFADADLIGWPLQVIVGKRGLAEQKVEIKRRSTGARRDIPLAALTDA 555

Query: 641 LT 642
           L 
Sbjct: 556 LA 557


>gi|90413553|ref|ZP_01221544.1| prolyl-tRNA synthetase [Photobacterium profundum 3TCK]
 gi|90325485|gb|EAS41968.1| prolyl-tRNA synthetase [Photobacterium profundum 3TCK]
          Length = 571

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 49/248 (19%), Positives = 96/248 (38%), Gaps = 11/248 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +   L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R+
Sbjct: 3   TSNYLLSTLKETPNDAEVISHQLMLRAGMIRKLA---SGLYTWLPTGLRVLRKVENIVRQ 59

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           +I      EI  P V    LW+++G  +     +        T +  R F L P      
Sbjct: 60  EIDNAGAVEILMPVVQPFELWEETGRSEKMGPELLRF-----TDRHSRPFVLSPTAEEVV 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
            ++  + + SY++LP+ L +  + +R+E      G+MR R F+  DA+ F    E +   
Sbjct: 115 TSLVRNEISSYKQLPLNLYQIQTKFRDERRPRF-GVMRAREFSMMDAYSFDIDKEGLEKS 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +H+     +   G E   V   +      GS      AE+    +  + ++     I
Sbjct: 174 YQAMHDAYCKAFDRMGLEYRPVLADSGAIGGSGSQEFHVLAESGEDLIAFSSESDYAANI 233

Query: 464 NTGVLLGE 471
                L  
Sbjct: 234 EKAEALAP 241



 Score = 88.7 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 58/167 (34%), Gaps = 13/167 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           + R  + G I Q+  N   + N   +    +    V +    +G  + R +   IE    
Sbjct: 405 LKRGIEVGHIFQLGTNYSEKMNCNVLGPDGKS---VTLEMGCYGIGVSRVVASAIEQNYD 461

Query: 545 N----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                 P  L+P Q  +  +    +      A+ +   L +  + +  D R E      +
Sbjct: 462 ENGIIWPTALAPFQVAIVPMNMAKSEEVKAAAESLYAELTAAGIEVLFDDRKERPGVMFK 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  +  IP  I+ G++      +  +         V + D + ++ +
Sbjct: 522 DIELIGIPHTIVIGNRSLENGEMEYKDRRDGNKVAVPVTDVVEMIKQ 568


>gi|256005276|ref|ZP_05430242.1| prolyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|255990712|gb|EEU00828.1| prolyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|316939553|gb|ADU73587.1| prolyl-tRNA synthetase [Clostridium thermocellum DSM 1313]
          Length = 572

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 50/216 (23%), Positives = 90/216 (41%), Gaps = 11/216 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +            E+E   H+ + R   +  +A   SG+  +   G+++F+ +   +R +
Sbjct: 4   SNMFFQTLREVPAEAEIASHQLMLRAGLMRKLA---SGIYSFLPLGYRVFRKIEQIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E+    +L    +Q SG W+ + A MF +K      ++ R F L P +     
Sbjct: 61  MDRAGAQELIMSALLPAESYQASGRWEVFGAEMFRLKD-----RNGRDFCLGPTHEEIFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
                  +SYR LP+ L +  + YR+E      G+MR R F   DA+ F   E   +   
Sbjct: 116 ETVKSVTRSYRSLPLILYQIQTKYRDERRPRF-GVMRSREFVMKDAYSFDRDEAGLDISY 174

Query: 406 -KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            K+++    I+   G + I+V   T      GS   
Sbjct: 175 KKMYDAYCRIFDRLGLDYIIVDADTGAMGGSGSQEF 210



 Score = 90.6 bits (223), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 68/183 (37%), Gaps = 10/183 (5%)

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
            PK    +K   G +      ++        +  Y++    K  P+++     G      
Sbjct: 394 CPKCGAPVKVEFGIEV-GHIFKLGTKYSEALDCIYLDETG-KERPMIMGCYGIGINRSMA 451

Query: 536 GIMIENFKGNLPLWL---SPIQAIVTTITSS---AVEYAQEIANLLKSHHLSIETDFRNE 589
            ++ +N   N  +W    +P   IV  + ++    +E A++I   L    + +  D R+E
Sbjct: 452 AVIEQNNDENGIIWPISIAPYHVIVIPVNTTDSVQMELAEKIYTQLGEMGIEVLLDDRDE 511

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPD 649
               K ++  +  IPI I  G + A E  +  +         +   +AI    KE +   
Sbjct: 512 RPGVKFKDADLIGIPIRITVGKR-AGEGIVEYKLRREKDFAAIPYEEAIAK-AKEEVAEG 569

Query: 650 CQK 652
            +K
Sbjct: 570 LKK 572


>gi|332974215|gb|EGK11148.1| proline--tRNA ligase [Kingella kingae ATCC 23330]
          Length = 570

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 44/223 (19%), Positives = 83/223 (37%), Gaps = 11/223 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       E+    H+ + R      I  + SG+  W   G ++ + + + +R 
Sbjct: 3   ASQFFISTLKEAPAEASLASHKLMLRAG---LIKANASGLYTWMPMGLRVLRKVEAIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LW++SG WD Y   +  +     T +    F   P      
Sbjct: 60  EMNRAGAIELLMPVVQPADLWKESGRWDFYGDELLRI-----TDRHENPFCFSPTCEEMI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
             +    + SY++LP       + +R+E      G+MR R F   DA+ F    + +   
Sbjct: 115 TDIVRKEVNSYKQLPKNFYHINTKFRDERRPRF-GVMRAREFVMKDAYSFHADFDSLKET 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
              +++    ++   G     V   T      GS      AE+
Sbjct: 174 YQNMYDAYCRVFNRLGLNFRPVAADTGSIGGTGSHEFQVLAES 216



 Score = 87.5 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 28/164 (17%), Positives = 68/164 (41%), Gaps = 13/164 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGN 545
           R  + G + Q+        NA +++++ +     ++    +G  + R +   IE N    
Sbjct: 405 RGIEVGHVFQLRDKYSKAMNATFLDNNGKSQ---IMEMGCYGIGVTRIVAAAIEQNNDER 461

Query: 546 LPLW---LSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
             +W   +SP   ++  +    +      A +I   L++  + +  D R+E     + + 
Sbjct: 462 GIIWTDAMSPFTVVIVPMNYKKSDDVKAAADKIYAQLQAAGVDVLLDDRDERAGVLLNDS 521

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +  IP  ++ GD+   E ++   +   T +Q +S+ D +  + 
Sbjct: 522 ELLGIPHRVVIGDRALKEGNVEYAQRRDTESQAISVNDIVAKIV 565


>gi|320120274|gb|EFE27922.2| proline--tRNA ligase [Filifactor alocis ATCC 35896]
          Length = 596

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 46/235 (19%), Positives = 94/235 (40%), Gaps = 11/235 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  L        ++E   H+ L R   +  +    SGV  +   G ++   +   +R +
Sbjct: 27  SRMYLPTLREVPSDAEVISHQLLLRAGLIRKL---VSGVYSYLPLGKRVLAKIERVIREE 83

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +   + +E+    +    LW++SG W+++   MF +   ++     R F L P +     
Sbjct: 84  MDAANSQEVLMSAIQPSELWKESGRWENFGPEMFRLYDRNE-----REFCLGPTHEEIFT 138

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT-KEQMFNEC 404
           ++    LKSY++LP+ L +  + YR+E      G++R R F   DA+ F    + M    
Sbjct: 139 SLVRDELKSYKQLPLSLYQIQTKYRDEKRPRF-GVIRAREFIMKDAYTFDRDPDGMKQSY 197

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSS 459
            ++      I+     +  +V+  +       S      AE+    V+       
Sbjct: 198 QEMWEAYTKIFDRLHMKYRVVEGDSGAMGGSDSHEFTAMAESGESTVMYAEGCDY 252



 Score = 82.9 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 28/173 (16%), Positives = 60/173 (34%), Gaps = 11/173 (6%)

Query: 480 EYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           +  L+    R  + G I Q+        N  Y++   +     M    +   + R +  +
Sbjct: 421 DRRLRLKSDRGIEVGNIFQLGTKYSDSLNLTYLDQDGKSKKVWMGSHGI--GVSRTMAAI 478

Query: 539 IENFKGN----LPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           IE          PL ++P   ++T +       ++  +++          +  D RNE  
Sbjct: 479 IEQNYDEKGIIWPLVVAPYHILITVVNAKKEDQMQLGEQLYQEYTKLGYEVLFDDRNERA 538

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
             K  +  +  IPI I  G + A E  +          +++ + +    +  E
Sbjct: 539 GVKFNDADLIGIPIRINVGRR-AEEGIVEFSLRRGGEKEEIPVSEIAQKVKDE 590


>gi|304387349|ref|ZP_07369541.1| proline--tRNA ligase [Neisseria meningitidis ATCC 13091]
 gi|304338600|gb|EFM04718.1| proline--tRNA ligase [Neisseria meningitidis ATCC 13091]
          Length = 599

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 48/223 (21%), Positives = 85/223 (38%), Gaps = 11/223 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       E+    H+ + R      I  + SG+  W   G ++ + + + +R 
Sbjct: 32  ASQFFISTLKEAPAEAALASHKLMIRAG---LIKANASGLYTWMPMGLRVLRKVENVVRE 88

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E+  P V    LWQ+SG W+ Y   +  +K   D     R F + P      
Sbjct: 89  EMARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHD-----RDFCMGPTCEEVI 143

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP       + +R+E      G+MR R F   DA+ F          
Sbjct: 144 ADIVRKEINSYKQLPKNFYHIQTKFRDEVRPRF-GVMRAREFVMKDAYSFHADYASLQTT 202

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
              +++    I+   G E   V   T      GS      AE+
Sbjct: 203 YDAMYDAYCRIFTRLGLEFRPVAADTGSIGGTGSHEFQVLAES 245



 Score = 85.6 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 64/171 (37%), Gaps = 12/171 (7%)

Query: 484 KDAIGRDWQCGTIQVDFNLPSR---FNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMI 539
            D  GR      I+V      R     A  V+         ++    +G  I R +   I
Sbjct: 424 PDGQGRLKLARGIEVGHVFQLRDKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAI 483

Query: 540 E-NFKGNLPLW---LSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           E N      +W   ++P + ++  +    + +  E A +I   L +    +  D R+E  
Sbjct: 484 EQNNDEKGIIWTKAMAPFEVVIVPMNYKKSDTVREAADKIYAELLAAGADVLLDDRDERA 543

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
              + +  +  IP  I+ GD+   E ++      +   Q V++ + +  +T
Sbjct: 544 GVLLNDSELLGIPHRIVIGDRALKEGNVEYAERRNNEAQAVAIGEIVARVT 594


>gi|146293614|ref|YP_001184038.1| prolyl-tRNA synthetase [Shewanella putrefaciens CN-32]
 gi|166980158|sp|A4Y8F6|SYP_SHEPC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|145565304|gb|ABP76239.1| prolyl-tRNA synthetase [Shewanella putrefaciens CN-32]
          Length = 571

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 45/245 (18%), Positives = 89/245 (36%), Gaps = 11/245 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  L+        +E   H+ + R   +     + SG+  +   G ++ + + + +R +
Sbjct: 4   SKYLLSTQKETPANAEVISHQLMLRAGMIR---RNASGLYSYLPTGLRVLRKVEAIVREE 60

Query: 287 IK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      EI  P V    LW ++G WD +   +   K      +  R F L P +     
Sbjct: 61  MNKAGAIEILMPMVQPADLWVETGRWDKFGPELLRFKD-----RHNRDFVLGPTHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +    + SY++LP+ L +  + +R+E      G+MR R F   DA+ F    + M    
Sbjct: 116 DLIRKEVSSYKQLPLNLYQIQTKFRDEVRPRF-GMMRSREFLMKDAYSFHLDVDTMNETY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
             ++    +I    G     V   T       S      A++    +  +  +     I 
Sbjct: 175 EAMYTAYSNILSRMGLAFRPVLADTGSIGGSMSHEFHVLAQSGEDLIAYSTGSDYAANIE 234

Query: 465 TGVLL 469
                
Sbjct: 235 KAESP 239



 Score = 84.1 bits (206), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 25/168 (14%), Positives = 59/168 (35%), Gaps = 13/168 (7%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE--- 540
           A+ R  + G I Q+  N     NA  ++ + +     ++    +G  + R +   IE   
Sbjct: 403 AMARGIEVGHIFQLGTNYSKSMNATVLDENGKSQ---VLLMGCYGVGVSRIVAAAIEQNF 459

Query: 541 -NFKGNLPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            +     P  ++P    +  +    +    + A+++   L +  + +  D R E      
Sbjct: 460 DDRGIVWPEAIAPFSVGILPMNMHKSHRVTDIAEQLYKDLSAAGIEVLLDDRKERPGVMF 519

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +  +  IP  ++ GD+         +   +   Q +     +  L  
Sbjct: 520 ADMELIGIPHTVVIGDRNIDAGVFEYKNRRTGEKQDIPFDQLVDFLKN 567


>gi|166367159|ref|YP_001659432.1| prolyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
 gi|189083503|sp|B0JTD7|SYP_MICAN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|166089532|dbj|BAG04240.1| proline-tRNA ligase [Microcystis aeruginosa NIES-843]
          Length = 603

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 59/243 (24%), Positives = 98/243 (40%), Gaps = 8/243 (3%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +QQ          E+E   H+ L R   +  I   GSG+  +    W++ Q +   +R +
Sbjct: 4   SQQLFVTLREDPAEAEIPSHKCLVRAGYIRRI---GSGIYAYLPLMWRVLQKVSQIVREE 60

Query: 287 IK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E   PQ+    LWQ+SG WD+Y      +     T +  R   L P +     
Sbjct: 61  MNKAGAQECLLPQLQPAELWQESGRWDTYTKAEGIMFAL--TDRQNRELGLGPTHEEVIT 118

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           AV    ++SYR+LPV L +  + +R+E      GLMR R F   DA+ F   E+   +  
Sbjct: 119 AVARDLIRSYRQLPVNLYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSFNLDEECLKKTY 177

Query: 406 KIHNL-IISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
           +  ++   +I++  G     V+  +       S      A+     VL T        + 
Sbjct: 178 QAMDIAYRNIFRRCGLAFRAVEADSGAIGGSASQEFMVLADAGEDEVLFTADEKYAANVE 237

Query: 465 TGV 467
             V
Sbjct: 238 KAV 240



 Score = 86.0 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/161 (21%), Positives = 63/161 (39%), Gaps = 9/161 (5%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I Q+ +      NAFY N   E   P+ +     G        + +++  +  
Sbjct: 435 RGIEVGHIFQLGYKYSQAMNAFYTNEAGE-STPICMGCYGIGVSRLAQAAVEQSYDKDGI 493

Query: 548 LWL---SPIQAIVTT---ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W    +P QAIV       +  V+ A+ + N L    +    D R+E    K ++  + 
Sbjct: 494 IWPVAIAPYQAIVVIPNLADAEQVKTAESLYNELNQAGIETLLDDRDERAGVKFKDADLI 553

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            IP  I+ G K      + +    S    +V++ + +  L 
Sbjct: 554 GIPYRIVTG-KSLKSGKVELVERASKKASEVAINEVVSYLK 593


>gi|159030425|emb|CAO91326.1| proS [Microcystis aeruginosa PCC 7806]
          Length = 603

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 59/243 (24%), Positives = 98/243 (40%), Gaps = 8/243 (3%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +QQ          E+E   H+ L R   +  I   GSG+  +    W++ Q +   +R +
Sbjct: 4   SQQLFVTLREDPAEAEIPSHKCLVRAGYIRRI---GSGIYAYLPLMWRVLQKVSQIVREE 60

Query: 287 IK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E   PQ+    LWQ+SG WD+Y      +     T +  R   L P +     
Sbjct: 61  MNKAGAQECLLPQLQPAELWQESGRWDTYTKAEGIMFAL--TDRQNRELGLGPTHEEVIT 118

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           AV    ++SYR+LPV L +  + +R+E      GLMR R F   DA+ F   E+   +  
Sbjct: 119 AVARDLIRSYRQLPVNLYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSFNLDEECLKKTY 177

Query: 406 KIHNL-IISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
           +  ++   +I++  G     V+  +       S      A+     VL T        + 
Sbjct: 178 QAMDIAYRNIFRRCGLAFRAVEADSGAIGGSASQEFMVLADAGEDEVLFTADEKYAANVE 237

Query: 465 TGV 467
             V
Sbjct: 238 KAV 240



 Score = 86.4 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 35/161 (21%), Positives = 63/161 (39%), Gaps = 9/161 (5%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I Q+ +      NAFY N   E   P+ +     G        + +++  +  
Sbjct: 435 RGIEVGHIFQLGYKYSQAMNAFYTNEAGE-STPICMGCYGIGVSRLAQAAVEQSYDKDGI 493

Query: 548 LWL---SPIQAIVTT---ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W    +P QAIV       +  V+ A+ + N L    +    D RNE    K ++  + 
Sbjct: 494 IWPVAIAPYQAIVVIPNLADAEQVKTAESLYNELNQAGIETLLDDRNERAGVKFKDADLI 553

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            IP  I+ G K      + +    S    +V++ + +  L 
Sbjct: 554 GIPYRIVTG-KSLKSGKVELVERASKKASEVAINEVVSYLK 593


>gi|317490123|ref|ZP_07948612.1| prolyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA]
 gi|325833438|ref|ZP_08165887.1| proline--tRNA ligase [Eggerthella sp. HGA1]
 gi|316910828|gb|EFV32448.1| prolyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA]
 gi|325485362|gb|EGC87831.1| proline--tRNA ligase [Eggerthella sp. HGA1]
          Length = 584

 Score =  145 bits (365), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 48/228 (21%), Positives = 87/228 (38%), Gaps = 11/228 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q           ++E   HR L R   +   A   SGV  +   G ++   + + +R +
Sbjct: 10  SQLYAPTLKEDPADAEIASHRLLLRAGFIRKTA---SGVYTFLPLGKRVLAKVENIVREE 66

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +EI  P +    LW +SG W+ Y   +  +    D     R F L P +     
Sbjct: 67  MDGIGAQEIMMPALQPGELWHESGRWNDYGPELMRLVDRHD-----REFCLGPTHEELIT 121

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           ++  + L+SY+ELP+ L +    +R+E      GL+R R F   DA+ F   ++   +  
Sbjct: 122 SLVRNELRSYKELPLSLYQIQVKFRDEIRPRF-GLLRSREFIMKDAYSFHADQESLQKTY 180

Query: 406 -KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
             +      I    G +   V+          +      AE     ++
Sbjct: 181 DDMSEAYGRICDRMGMDYRPVEADPGQIGGSVTCEFMALAEAGEAELV 228



 Score = 92.2 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 63/182 (34%), Gaps = 11/182 (6%)

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
           V  G+     P     L  A G +      Q+         A ++     +  P ++   
Sbjct: 387 VQPGDS---CPSCGLPLDGARGIEVS-QVFQLGDKYSKAMGATFMAEDGSEQ-PFLMGCY 441

Query: 527 VFGSIERFIGIMIENFKGNLPLWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHL 580
             G       I+ ++   N  +W    +P    V  +T         A+++A+ L    L
Sbjct: 442 GVGISRTMAAIVEQHNDENGIMWPLTVAPAHVCVIPLTVGDDEVQPAAEKLASDLAKLGL 501

Query: 581 SIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
            +  D R E    K  +  +   P+ +I G +  +E+ + I+R  +   + + L      
Sbjct: 502 EVVIDDRKERAGVKFADADLIGWPLQVIVGKRGLAEQKVEIKRRSTGARRDIPLAALTDA 561

Query: 641 LT 642
           L 
Sbjct: 562 LA 563


>gi|154335629|ref|XP_001564053.1| bifunctional aminoacyl-trna synthetase [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134061084|emb|CAM38105.1| putative prolyl-tRNA synthetase [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 719

 Score =  145 bits (365), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 72/384 (18%), Positives = 145/384 (37%), Gaps = 61/384 (15%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ-HLWQQSGHWDSYRAN 317
            D SG        + +++ +  ++  +I+    E+   P  + +  L ++  H + +   
Sbjct: 238 YDVSGCYIIRPWAYYVWKCVQRFLGGRIERLGVEDCYFPMFVSRSCLEREKDHIEGFAPE 297

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           +  V  A DT  + +  A++P +       +   ++S+R+LPVRL  + +V R E S   
Sbjct: 298 VAWVTRAGDTELE-QPVAVRPTSETVMYPYYAKWIRSHRDLPVRLNMWNNVIRWEFSHPT 356

Query: 378 HGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
              +R R F   + H  +   E    E L I     ++Y+      ++    T  EK  G
Sbjct: 357 -PFIRTREFLWQEGHCAWAKAEDCAKEVLDILECYAAVYEQLLAVPVVRGRKTEKEKFAG 415

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
                                                 Y    E  ++ A+GR  Q  T 
Sbjct: 416 GS------------------------------------YTTTVETFIE-AVGRGCQGATS 438

Query: 497 Q-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLS 551
             +  N    F+  + +  + +   ++  +  +G   R IG+MI    +N    +P  ++
Sbjct: 439 HNLGQNFGKMFDIRFQDPENNEQT-LIPWQNSWGLSTRVIGVMIMVHGDNRGMVMPPRVA 497

Query: 552 PIQAIVTT--ITSSAVEYA--------QEIANLLKSHHLSIETDFRNE-TINYKIREHSI 600
             Q I+    IT    E A        +++   L    +  + D R+  +  ++     +
Sbjct: 498 STQVIIVPVGITKDTTEEARQALLASCRQLEGELCEGGVRAKCDLRDNYSPGWRFNHWEV 557

Query: 601 KKIPIIIICGDKEASERS--IGIR 622
           K +P+ +  G +E +ERS  + +R
Sbjct: 558 KGVPLRVELGPRELAERSLVVAVR 581


>gi|256370695|ref|YP_003108520.1| prolyl-tRNA synthetase [Candidatus Sulcia muelleri SMDSEM]
 gi|256009487|gb|ACU52847.1| prolyl-tRNA synthetase [Candidatus Sulcia muelleri SMDSEM]
          Length = 488

 Score =  145 bits (365), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 77/410 (18%), Positives = 152/410 (37%), Gaps = 71/410 (17%)

Query: 261 DGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANM 318
           D  G +     G+ I++ + S + R +K   +E +  P ++ +    ++  H   +    
Sbjct: 28  DVRGCMILKPYGFAIWEKIQSILDRILKSTGHENVYFPLLIPKSFLSKEFNHIKGFAKEC 87

Query: 319 FAVKCA------------DDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFG 366
             +               D +        ++P +       +   + SYR+LP+   ++ 
Sbjct: 88  AVITHYRLKNLNNKNLIVDQSSHLDEELIVRPTSETIIWNSYKRWINSYRDLPILFNQWA 147

Query: 367 SVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
           ++ R E        +R   F   + H    TK++  N   K+ N+  +  ++F    ++ 
Sbjct: 148 NIIRWEMRPRF--FLRTSEFLWQEGHTAHSTKKEAINHTKKMLNIYTNFVENFFSIPVIQ 205

Query: 426 KLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKD 485
            + T  EK  G++  +                                      E I++D
Sbjct: 206 GIKTSSEKFAGAEKTF------------------------------------CIESIMQD 229

Query: 486 AIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----EN 541
             G+  Q  T        S+  AF V   ++K     +    +G   R IG MI    ++
Sbjct: 230 --GKSIQIATSHFLGQNFSK--AFDVKYTTKKGKKKYVWATSWGISTRLIGAMIMTHSDD 285

Query: 542 FKGNLPLWLSPIQAIVTTI--TSSAVEYAQEIANLLKS----HHLSIETDFRNE-TINYK 594
               LP  ++PIQ ++  +  T   +   ++I   LK+      ++I+ D R   T  +K
Sbjct: 286 KGLILPPKIAPIQIVIIPVYKTQEQLHLIEKIVFPLKASIEKKGINIKYDKRTYYTPGWK 345

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS---LLDAIPIL 641
             E+ I+ IPI I  G K+    ++ + R  +   + +S   L   IP L
Sbjct: 346 FNEYEIQGIPIRITIGKKDLDRGTVEVVRRDTLEKKNISIKKLETFIPKL 395


>gi|182435611|ref|YP_001823330.1| prolyl-tRNA synthetase [Streptomyces griseus subsp. griseus NBRC
           13350]
 gi|226701340|sp|B1VYP2|SYP_STRGG RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|178464127|dbj|BAG18647.1| putative prolyl-tRNA synthetase [Streptomyces griseus subsp.
           griseus NBRC 13350]
          Length = 567

 Score =  145 bits (365), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 55/325 (16%), Positives = 120/325 (36%), Gaps = 21/325 (6%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++E   H+ L R   +     + +G+  W   G K+   + + +R +
Sbjct: 8   SRLMVKTLRDDPADAETLSHKLLVRAGYVR---RNAAGIWSWLPLGKKVLDNISNVVREE 64

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E+  P +L +  ++ SG W+ Y   +F +K      +    + L P +     
Sbjct: 65  MDAIGAQEVLLPALLPKEPYEASGRWEEYGDLLFRLKD-----RKGGDYLLGPTHEEIFT 119

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
                   SY++LPV L +  + YR+E      G++R R F   D++ F T ++      
Sbjct: 120 QTVKDQCTSYKDLPVMLYQIQTKYRDEARPR-SGVLRGREFQMKDSYSFDTTDEGLAHSY 178

Query: 406 KIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA---ENIMKGVLDTIKNSSQD 461
            +H    I I++  G +  +V   +       S+     A   E+      +    ++ +
Sbjct: 179 ALHRAAYIKIFERLGLDHRIVSAVSGAMGGSASEEFLAPAAAGEDTFADCPNCDYAANTE 238

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
            +   +   +G+ +G   E    D      +     +     +      V    E     
Sbjct: 239 AVTFALAPVDGSAHGAVEELDTPDT--PTIETLAAHLGVPASATLKNLLVKVDGE----- 291

Query: 522 MIHRAVFGSIERFIGIMIENFKGNL 546
           ++   V G  E  +G + E+    +
Sbjct: 292 IVAVGVPGHREVDLGKLGEHLAPAV 316



 Score = 86.0 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 68/167 (40%), Gaps = 12/167 (7%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFK 543
            + R  + G I Q+       F    +    ++  PV +    +G  + R +  + E   
Sbjct: 403 VLDRAIEIGHIFQLGRKYADTFQLDVL---GQQGKPVRVTMGSYGIGVSRAVAALTEQTA 459

Query: 544 GN----LPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNE-TINYKIRE 597
            +     P  ++P    V     +   E A +++  L +  L +  D R   +   K  +
Sbjct: 460 DDKGLCWPREIAPADVHVVAAGKALQTELALDVSEKLNAAGLRVLVDDRPGVSPGVKFTD 519

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
             +  +P I++ G + +++  + ++   +   +++++ +AI  LT +
Sbjct: 520 SELIGVPKILVAGRR-SADGVLELKDRRTGEREELTVDEAIARLTAD 565


>gi|332704074|ref|ZP_08424162.1| Prolyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay]
 gi|332554223|gb|EGJ51267.1| Prolyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay]
          Length = 576

 Score =  145 bits (365), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 46/220 (20%), Positives = 89/220 (40%), Gaps = 11/220 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  L        ++E   H+ L R   +  +    SG+  +   G +    +   +R++
Sbjct: 4   SRFYLPTLKEVPADAEVVSHKLLLRAGLIRQL---TSGIYTYLPMGLRALNKVADIVRQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +EI  P V    LW+++G W+ Y   +   K   D+      + L P +     
Sbjct: 61  MDRAGAQEILMPMVQPAELWKETGRWEFYGKELLRFKDRKDS-----DYCLGPTHEEVVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    ++SYR+LP+ L +  + +R+E      GLMR R F   DA+ F   E+  N+  
Sbjct: 116 NLVRGEVRSYRQLPLNLYQIQTKFRDEIRPRF-GLMRGREFVMKDAYSFDRDEEGANKSY 174

Query: 406 -KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
             ++     I++  G +   V+  +       S      A
Sbjct: 175 WSMYQAYAQIFRRLGLKFKAVEADSGAIGGSFSHEFMVLA 214



 Score = 82.5 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 25/162 (15%), Positives = 60/162 (37%), Gaps = 10/162 (6%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G +  + +      +A +++ + +    VM    +   + R I   IE    +  
Sbjct: 402 RGIEVGHVFKLGYKYSKAMHATFLDENGKDQTMVMGCYGI--GVSRIIASAIEQNHDDGG 459

Query: 546 --LPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              P  ++P +A + ++     +    A E+   L++  + +  D R E    K ++  +
Sbjct: 460 IIFPPSIAPYEAALISLGKSGDAVNAKAAELYESLRAEGIEVLFDDREERPGVKFKDADL 519

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
              P+ I+ G K      +  +   +    ++ L D      
Sbjct: 520 VGYPMQIVLGGKGLERGVVEAKDRRTGEKAELPLEDFTKAFK 561


>gi|284799796|ref|ZP_05984887.2| proline--tRNA ligase [Neisseria subflava NJ9703]
 gi|284796829|gb|EFC52176.1| proline--tRNA ligase [Neisseria subflava NJ9703]
          Length = 595

 Score =  145 bits (365), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 46/225 (20%), Positives = 84/225 (37%), Gaps = 12/225 (5%)

Query: 228 QQELTQYLYFLEESEKRDHRKLAREMDLFH----IAEDGSGVIFWHRKGWKIFQTLISYM 283
           +  +    +F+   ++           L      I  + SG+  W   G ++ + + + +
Sbjct: 23  KYAMKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENIV 82

Query: 284 RRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
           R ++ +    E+  P V    LWQ+SG W+ Y   +  +K   D     R F + P    
Sbjct: 83  REEMARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHD-----RDFCMGPTCEE 137

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN 402
               +    + SY++LP       + +R+E      G+MR R F   DA+ F        
Sbjct: 138 VIADIVRKEVNSYKQLPKNFYHIQTKFRDEVRPRF-GVMRAREFVMKDAYSFHADYASLQ 196

Query: 403 ECLK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
              + +++    I+   G E   V   T      GS      AE+
Sbjct: 197 TTYQDMYDAYCRIFTRLGLEFRPVAADTGSIGGTGSHEFQVLAES 241



 Score = 84.8 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 63/170 (37%), Gaps = 12/170 (7%)

Query: 484 KDAIGRDWQCGTIQVDFNLPSR---FNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMI 539
            D  GR      I+V      R     A  V+         ++    +G  I R +   I
Sbjct: 420 PDEQGRLKLARGIEVGHVFQLRDKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAI 479

Query: 540 E-NFKGNLPLW---LSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           E N      +W   ++P + ++  +    + +  E A +I   L +    +  D R+E  
Sbjct: 480 EQNNDEKGIVWTKAMAPFEVVIVPMNYKKSDAVREAADKIYAELLAAGADVLLDDRDERA 539

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
              + +  +  IP  I+ GD+   E ++      +   Q V++ + +  +
Sbjct: 540 GVLLNDSELLGIPHRIVIGDRALKEGNVEYAERRNNQAQAVAVSEVVAKV 589


>gi|117919846|ref|YP_869038.1| prolyl-tRNA synthetase [Shewanella sp. ANA-3]
 gi|152016600|sp|A0KV13|SYP_SHESA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|117612178|gb|ABK47632.1| prolyl-tRNA synthetase [Shewanella sp. ANA-3]
          Length = 570

 Score =  145 bits (365), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 45/245 (18%), Positives = 89/245 (36%), Gaps = 11/245 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  L+        +E   H+ + R   +     + SG+  +   G ++ + + + +R +
Sbjct: 4   SKYLLSTQKETPANAEVISHQLMLRAGMIR---RNASGLYSYLPTGLRVLRKVEAIVREE 60

Query: 287 IK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      EI  P V    LW ++G WD +   +   K      +  R F L P +     
Sbjct: 61  MNKAGAIEILMPMVQPADLWVETGRWDKFGPELLRFKD-----RHNRDFVLGPTHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +    + SY++LP+ L +  + +R+E      G+MR R F   DA+ F    + M    
Sbjct: 116 DLIRKEVSSYKQLPLNLYQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHLDVDTMNETY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
             ++    +I    G     V   T       S      A++    +  +  +     I 
Sbjct: 175 EAMYQAYSNILSRMGLAFRPVLADTGSIGGSMSHEFHVLAQSGEDLIAYSTGSDYAANIE 234

Query: 465 TGVLL 469
                
Sbjct: 235 KAESP 239



 Score = 82.5 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 59/168 (35%), Gaps = 13/168 (7%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE--- 540
           A+ R  + G I Q+  N     NA  ++ + +     ++    +G  + R +   IE   
Sbjct: 403 AMARGIEVGHIFQLGTNYSKSMNATVLDENGKSQ---VLLMGCYGVGVSRIVAAAIEQNF 459

Query: 541 -NFKGNLPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            +     P  ++P    +  +    +    + A+++   L +  + +  D R E      
Sbjct: 460 DDRGIVWPEAIAPFSVGILPMNMHKSHRVTDIAEQLYKDLSAVGIDVLLDDRKERPGVMF 519

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +  +  IP  ++ GD+         +   +   Q V     +  L  
Sbjct: 520 ADMELIGIPHTVVIGDRNIDAGVFEYKNRRTGEKQDVPFDQIVDFLKN 567


>gi|254517451|ref|ZP_05129507.1| prolyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
 gi|226911200|gb|EEH96401.1| prolyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
          Length = 570

 Score =  145 bits (365), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 52/221 (23%), Positives = 94/221 (42%), Gaps = 11/221 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +   ++       E+E   H+ + R   +  +A   SG+  +   G K+ + + + +R +
Sbjct: 4   SNMLISTLREVPAEAEIDSHKLMLRAGMIRKMA---SGIYNYMPLGLKVLKNVENIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           + +   +E     V    LWQ+SG WD Y A +  +K  ++     R F L P +     
Sbjct: 61  MNNAGAQEFLASAVQPAELWQESGRWDVYGAELIRLKDRNN-----REFCLGPTHEEVFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +  + +KSY++LPV L +  + YR+E      G+MR R F   DA+ F    E +    
Sbjct: 116 DIARNEIKSYKQLPVNLYQIQTKYRDERRPRF-GVMRSREFIMKDAYSFDKDQEGLDVSY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
            K+    I I+   G +   V+  +       S      +E
Sbjct: 175 NKMREAYIKIFNRCGIDAKPVEADSGAIGGSNSAEFMVRSE 215



 Score = 85.2 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 31/166 (18%), Positives = 65/166 (39%), Gaps = 10/166 (6%)

Query: 486 AIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
            I R  + G I  +        NA +++ +  K  P ++     G       I+ ++   
Sbjct: 399 TISRGTEVGHIFKLGTKYSEAMNANFIDENG-KEKPFIMGCYGIGVTRTMASIIEQHNDE 457

Query: 545 NLPLWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           N  +W    +P    +  +       ++ A EI   LKS  +    D RNE    K ++ 
Sbjct: 458 NGIVWPLSVAPYHVNIIPVNIKDEEQMKIANEIYEDLKSIGVDAILDDRNERAGVKFKDS 517

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            +  IP+ I  G K   +  +  +   ++  + + + +A+  + +E
Sbjct: 518 DLMGIPMRITVGKK-IVDGEVEFKLR-TSDMENIKIEEAVDRVREE 561


>gi|237739058|ref|ZP_04569539.1| prolyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
 gi|229423658|gb|EEO38705.1| prolyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
          Length = 567

 Score =  145 bits (365), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 55/246 (22%), Positives = 98/246 (39%), Gaps = 11/246 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  +       +E+E   H+ + R   +  +A   SG+  +   G++  + + + +R 
Sbjct: 3   FSKAYIKTLKETPKEAEIASHKLMLRAAMIKKLA---SGIYAYLPLGYRTIRKIENIIRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LWQ+SG WD   A M  +K      +  R F L P      
Sbjct: 60  EMDRAGALELLMPVVQPAELWQESGRWDVMGAEMLRLKD-----RHERDFVLSPTQEEMI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
            ++    + SY+ LP+ L    + +R+E      GLMR R FT  D + F T  E +  E
Sbjct: 115 TSIVRSDISSYKSLPLNLYHIQTKFRDERRPRF-GLMRGREFTMKDGYSFHTSQESLDEE 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            L + +    I+   G +   V   +      GS      AE+    ++ +  +     I
Sbjct: 174 FLNMRDAYTRIFTRCGLKFRPVDADSGNIGGSGSQEFQVLAESGEDEIIYSDGSEYAANI 233

Query: 464 NTGVLL 469
              V  
Sbjct: 234 EKAVSE 239



 Score = 88.3 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 66/162 (40%), Gaps = 9/162 (5%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  +CG I  +        NA Y++ + +  + +++     G        + +N   N  
Sbjct: 403 RGIECGQIFKLGDKYSKAMNATYLDENGKTQY-MLMGCYGIGVTRTMAAAIEQNNDENGI 461

Query: 548 LWLSPIQAIVTTI------TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W   I   +  +          V  A++I N L++  + +  D R+E   +K ++  + 
Sbjct: 462 IWPVSIAPYIVDVIPANIKNEGQVSLAEKIYNELQAEDIDVMLDDRDEKPGFKFKDADLI 521

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             P  ++ G + A E  + ++   +  T +VS  + +  + +
Sbjct: 522 GFPFKVVVGKR-ADEGIVEVKIRKTGETLEVSESEVVAKIKE 562


>gi|120598308|ref|YP_962882.1| prolyl-tRNA synthetase [Shewanella sp. W3-18-1]
 gi|152016601|sp|A1RI33|SYP_SHESW RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|120558401|gb|ABM24328.1| prolyl-tRNA synthetase [Shewanella sp. W3-18-1]
          Length = 571

 Score =  145 bits (365), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 45/245 (18%), Positives = 89/245 (36%), Gaps = 11/245 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  L+        +E   H+ + R   +     + SG+  +   G ++ + + + +R +
Sbjct: 4   SKYLLSTQKETPANAEVISHQLMLRAGMIR---RNASGLYSYLPTGLRVLRKVEAIVREE 60

Query: 287 IK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      EI  P V    LW ++G WD +   +   K      +  R F L P +     
Sbjct: 61  MNKAGAIEILMPMVQPADLWVETGRWDKFGPELLRFKD-----RHNRDFVLGPTHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +    + SY++LP+ L +  + +R+E      G+MR R F   DA+ F    + M    
Sbjct: 116 DLIRKEVSSYKQLPLNLYQIQTKFRDEVRPRF-GMMRSREFLMKDAYSFHLDVDTMNETY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
             ++    +I    G     V   T       S      A++    +  +  +     I 
Sbjct: 175 EAMYTAYSNILSRMGLAFRPVLADTGSIGGSMSHEFHVLAQSGEDLIAYSTGSDYAANIE 234

Query: 465 TGVLL 469
                
Sbjct: 235 KAESP 239



 Score = 84.1 bits (206), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 25/168 (14%), Positives = 59/168 (35%), Gaps = 13/168 (7%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE--- 540
           A+ R  + G I Q+  N     NA  ++ + +     ++    +G  + R +   IE   
Sbjct: 403 AMARGIEVGHIFQLGTNYSKSMNATVLDENGKSQ---VLLMGCYGVGVSRIVAAAIEQNF 459

Query: 541 -NFKGNLPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            +     P  ++P    +  +    +    + A+++   L +  + +  D R E      
Sbjct: 460 DDRGIVWPEAIAPFSVGILPMNMHKSHRVTDIAEQLYKDLSAAGIEVLLDDRKERPGVMF 519

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +  +  IP  ++ GD+         +   +   Q +     +  L  
Sbjct: 520 ADMELIGIPHTVVIGDRNIDAGVFEYKNRRTGEKQDIPFDQLVDFLKN 567


>gi|238763953|ref|ZP_04624909.1| Prolyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
 gi|238697770|gb|EEP90531.1| Prolyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
          Length = 572

 Score =  145 bits (365), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 51/257 (19%), Positives = 100/257 (38%), Gaps = 25/257 (9%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGVRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E++ P V    LWQ+SG W+ Y   +       +     R F L P +    
Sbjct: 60  EMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGE-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLIRGEINSYKQLPLNFFQIQTKFRDEVRPRF-GVMRAREFLMKDAYSFHTTQESLQET 173

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
                +  +  K F    +  +        +G  A  +            + +S +D I 
Sbjct: 174 YDA--MYAAYSKIFSRMDLNFRAVLADTGSIGGSASHE---------FQVLADSGEDDIV 222

Query: 465 TGVLLGEGAFYGPKFEY 481
                  G+ Y    E+
Sbjct: 223 F----STGSDYAANIEF 235



 Score = 84.8 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 56/168 (33%), Gaps = 13/168 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           I R  + G I Q+         A             ++    +G  + R +   IE    
Sbjct: 405 IKRGIEVGHIFQLGTKYSEAMKATVQGEDG---RNQVMTMGCYGIGVSRVVAAAIEQNHD 461

Query: 545 N----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +     P  ++P Q  +  +         E A+E+   L++H + +  D R E       
Sbjct: 462 DRGIIWPDAIAPFQVAILPMNMHKSFRVKELAEELYTTLRAHGIDVILDDRKERPGVMFA 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  +  +P  ++ GD+      +  +   +     +   + I  L  +
Sbjct: 522 DMELIGVPHNVVIGDRNLDSEEVEYKNRRAGEKHMIKTSEIIDFLLSQ 569


>gi|319426918|gb|ADV54992.1| prolyl-tRNA synthetase [Shewanella putrefaciens 200]
          Length = 571

 Score =  145 bits (365), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 45/245 (18%), Positives = 89/245 (36%), Gaps = 11/245 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  L+        +E   H+ + R   +     + SG+  +   G ++ + + + +R +
Sbjct: 4   SKYLLSTQKETPANAEVISHQLMLRAGMIR---RNASGLYSYLPTGLRVLRKVEAIVREE 60

Query: 287 IK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      EI  P V    LW ++G WD +   +   K      +  R F L P +     
Sbjct: 61  MNKAGAIEILMPMVQPADLWVETGRWDKFGPELLRFKD-----RHNRDFVLGPTHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +    + SY++LP+ L +  + +R+E      G+MR R F   DA+ F    + M    
Sbjct: 116 DLIRKEVSSYKQLPLNLYQIQTKFRDEVRPRF-GMMRSREFLMKDAYSFHLDVDTMNEAY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
             ++    +I    G     V   T       S      A++    +  +  +     I 
Sbjct: 175 EAMYTAYSNILSRMGLAFRPVLADTGSIGGSMSHEFHVLAQSGEDLIAYSTGSDYAANIE 234

Query: 465 TGVLL 469
                
Sbjct: 235 KAESP 239



 Score = 84.1 bits (206), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 25/168 (14%), Positives = 59/168 (35%), Gaps = 13/168 (7%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE--- 540
           A+ R  + G I Q+  N     NA  ++ + +     ++    +G  + R +   IE   
Sbjct: 403 AMARGIEVGHIFQLGTNYSKSMNATVLDENGKSQ---VLLMGCYGVGVSRIVAAAIEQNF 459

Query: 541 -NFKGNLPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            +     P  ++P    +  +    +    + A+++   L +  + +  D R E      
Sbjct: 460 DDRGIVWPEAIAPFSVGILPMNMHKSHRVTDIAEQLYKDLSAAGIEVLLDDRKERPGVMF 519

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +  +  IP  ++ GD+         +   +   Q +     +  L  
Sbjct: 520 ADMELIGIPHTVVIGDRNIDAGVFEYKNRRTGEKQDIPFDQLVDFLKN 567


>gi|325136158|gb|EGC58766.1| prolyl-tRNA synthetase [Neisseria meningitidis M0579]
          Length = 599

 Score =  145 bits (365), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 49/275 (17%), Positives = 93/275 (33%), Gaps = 27/275 (9%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       E+    H+ + R      I  + SG+  W   G ++ + + + +R 
Sbjct: 32  ASQFFISTLKEAPAEAALASHKLMIRAG---LIKANASGLYTWMPMGLRVLRKVENVVRE 88

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E+  P V    LWQ+SG W+ Y   +  +K   D     R F + P      
Sbjct: 89  EMARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHD-----RDFCMGPTCEEVI 143

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP       + +R+E      G+MR R F   DA+ F          
Sbjct: 144 ADIVRKEINSYKQLPKNFYHIQTKFRDEVRPRF-GVMRAREFVMKDAYSFHADYASLQTT 202

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +++    I+   G     V   T      GS      AE+                 
Sbjct: 203 YDAMYDAYCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAESG---------------- 246

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
              +   + + Y    E      +  +      ++
Sbjct: 247 EDVIAYSDTSDYAANIELAPTLPLKGERTAAQAEL 281



 Score = 85.6 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 64/171 (37%), Gaps = 12/171 (7%)

Query: 484 KDAIGRDWQCGTIQVDFNLPSR---FNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMI 539
            D  GR      I+V      R     A  V+         ++    +G  I R +   I
Sbjct: 424 PDGQGRLKLARGIEVGHVFQLRDKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAI 483

Query: 540 E-NFKGNLPLW---LSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           E N      +W   ++P + ++  +    + +  E A +I   L +    +  D R+E  
Sbjct: 484 EQNNDEKGIIWTKAMAPFEVVIVPMNYKKSDTVREAADKIYAELLAAGADVLLDDRDERA 543

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
              + +  +  IP  I+ GD+   E ++      +   Q V++ + +  +T
Sbjct: 544 GVLLNDSELLGIPHRIVIGDRALKEGNVEYAERRNNEAQAVAIGEIVARVT 594


>gi|255918003|pdb|3IAL|A Chain A, Giardia Lamblia Prolyl-Trna Synthetase In Complex With
           Prolyl-Adenylate
 gi|255918004|pdb|3IAL|B Chain B, Giardia Lamblia Prolyl-Trna Synthetase In Complex With
           Prolyl-Adenylate
          Length = 518

 Score =  145 bits (365), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 73/426 (17%), Positives = 152/426 (35%), Gaps = 65/426 (15%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
              ++       +    +L        G + +   G+ +   ++     +       +I 
Sbjct: 19  KTRDTFADWFDAIMDAAELVDRRYPVKGCVVFRPYGFFMENAIMRLCEEEYAKVGISQIL 78

Query: 296 TPQVLDQHL-WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
            P V+ +    ++S H   + A  F V+       + R  AL+P +     ++F+  ++S
Sbjct: 79  FPTVIPESFLKKESDHIKGFEAECFWVEKGGLQPLEER-LALRPTSETAIYSMFSKWVRS 137

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH-VFCTKEQMFNECLKIHNLIIS 413
           Y++LP+++ +  +++R+E   +   L+RVR    ++AH    T E   ++      +I  
Sbjct: 138 YKDLPLKIHQTCTIFRHETK-NTKPLIRVREIHWNEAHCCHATAEDAVSQLSDYWKVID- 195

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
               F  E        R          WD                             GA
Sbjct: 196 --TIFSDELCFKGQKLRRV-------CWDRF--------------------------PGA 220

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
            Y    + ++    GR  Q   I  +     S F+  Y N  +E  HP +      G   
Sbjct: 221 DYSEVSDVVMPC--GRVLQTAGIHNLGQRFSSTFDILYANKANESVHPYL---TCAGIST 275

Query: 533 RFIG----IMIENFKGNLPLWLSPIQAIVTTIT----------SSAVEYAQEIANLLKSH 578
           R +     I  ++    LP  ++PI  ++  I              +    EIA+ LKS 
Sbjct: 276 RVLACALSIHGDSGGLVLPPLIAPIHVVIIPIGCGKKNNQESDQQVLGKVNEIADTLKSK 335

Query: 579 -HLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERS--IGIRRFGSTTTQKVSL 634
             L +  D   ++++  K+  + +K +P+ I  G ++ +     +  R  G    + + +
Sbjct: 336 LGLRVSIDDDFSKSMGDKLYYYELKGVPLRIEVGQRDLANGQCIVVPRDVGKDQKRVIPI 395

Query: 635 LDAIPI 640
            + + +
Sbjct: 396 TEVMKV 401


>gi|319638108|ref|ZP_07992872.1| prolyl-tRNA synthetase [Neisseria mucosa C102]
 gi|317400753|gb|EFV81410.1| prolyl-tRNA synthetase [Neisseria mucosa C102]
          Length = 570

 Score =  145 bits (365), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 48/223 (21%), Positives = 86/223 (38%), Gaps = 11/223 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       E+    H+ + R      I  + SG+  W   G ++ + + + +R 
Sbjct: 3   ASQFFISTLKEAPAEAALASHKLMIRAG---LIKANASGLYTWMPMGLRVLRKVENIVRE 59

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E+  P V    LWQ+SG W+ Y   +  +K   D     R F + P      
Sbjct: 60  EMARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHD-----RDFCMGPTCEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP       + +R+E      G+MR R F   DA+ F          
Sbjct: 115 ADIVRKEVNSYKQLPKNFYHIQTKFRDEVRPRF-GVMRAREFVMKDAYSFHADYASLQTT 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
            + +++    I+   G E   V   T      GS      AE+
Sbjct: 174 YQDMYDAYCRIFTRLGLEFRPVAADTGSIGGTGSHEFQVLAES 216



 Score = 84.1 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 62/170 (36%), Gaps = 12/170 (7%)

Query: 484 KDAIGRDWQCGTIQVDFNLPSR---FNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMI 539
            D  GR      I+V      R     A  V+         ++    +G  I R +   I
Sbjct: 395 PDEQGRLKLARGIEVGHVFQLRDKYAKAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAI 454

Query: 540 E-NFKGNLPLW---LSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           E N      +W   ++P + ++  +    + +  E A +I   L +    +  D R+E  
Sbjct: 455 EQNNDEKGIIWTKAMAPFEVVIVPMNYKKSDAVREAADKIYAGLLAAGADVLLDDRDERA 514

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
              + +  +  IP  I+ GD+   E ++          Q V++ + +  +
Sbjct: 515 GVLLNDSELLGIPHRIVIGDRALKEGNVEYAERRDNQAQAVAVSEVVAKV 564


>gi|296329234|ref|ZP_06871735.1| proline--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum ATCC
           23726]
 gi|296153590|gb|EFG94407.1| proline--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum ATCC
           23726]
          Length = 567

 Score =  145 bits (365), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 56/246 (22%), Positives = 98/246 (39%), Gaps = 11/246 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  +       +E+E   H+ + R   +  +A   SG+  +   G++  + + + +R 
Sbjct: 3   FSKAYIKTLKETPKEAEIASHKLMLRAGMIKKLA---SGIYAYLPLGYRTIRKIENIIRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LWQ+SG WD     M  +K      +  R F L P      
Sbjct: 60  EMDRAGALELLMPVVQPAELWQESGRWDVMGPEMLRLKD-----RHERDFVLSPTQEEMI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
            A+    + SY+ LP+ L    + +R+E      GLMR R FT  DA+ F T  E +  E
Sbjct: 115 TAIIRSDISSYKSLPINLYHIQTKFRDERRPRF-GLMRGREFTMKDAYSFHTSQESLDEE 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            L + +    I+   G +   V   +      GS      AE+    ++ +  +     I
Sbjct: 174 FLNMRDTYTRIFTRCGLKFRPVDADSGNIGGSGSQEFQVLAESGEDEIIYSDGSEYAANI 233

Query: 464 NTGVLL 469
              V  
Sbjct: 234 EKAVSE 239



 Score = 81.8 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 61/161 (37%), Gaps = 7/161 (4%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPL 548
           R  +CG I    +  S+           K   +++     G        + +N   N  +
Sbjct: 403 RGIECGQIFKLGDKYSKAMNATYLDEKGKTQFMLMGCYGIGVTRTMAASIEQNNDENGII 462

Query: 549 WLSPIQAIVTTITSS------AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
           W   I   +  +  +       V  A++I N L+   + +  D R+E   +K ++  +  
Sbjct: 463 WPVSIAPYIVDVIPANIKNEVQVSLAEKIYNELQEEKIDVMLDDRDEKPGFKFKDADLIG 522

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            P  ++ G + A E  + ++   +  T +VS  + I  + +
Sbjct: 523 FPFKVVVGKR-ADEGIVELKIRRTGETLEVSQNEVIAKIKE 562


>gi|261749214|ref|YP_003256899.1| prolyl-tRNA synthetase [Blattabacterium sp. (Periplaneta americana)
           str. BPLAN]
 gi|261497306|gb|ACX83756.1| prolyl-tRNA synthetase [Blattabacterium sp. (Periplaneta americana)
           str. BPLAN]
          Length = 490

 Score =  145 bits (365), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 78/442 (17%), Positives = 158/442 (35%), Gaps = 75/442 (16%)

Query: 233 QYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DY 291
             L        + + ++     L   +     +I     G+ I++ + + + +  K+  +
Sbjct: 2   HQLTKRNVDYSKWYNEIIIRSGLAEFSGIRGFMII-KPYGFSIWEIIKNTLDKMFKETGH 60

Query: 292 EEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCA-------------DDTIKDLRTFALK 337
           + +  P ++ +  + ++  H  ++      V                D   K      ++
Sbjct: 61  KNVYFPMLIPKSSFSKEKKHIANFSKECAIVTHCKLKKNTDQEELTVDPKSKLQEELVIR 120

Query: 338 PMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK 397
           P +       F H + SYR+LP+ L ++G+  R E        +R   F   + H   + 
Sbjct: 121 PTSESIIWKTFRHWIHSYRDLPLLLNQWGNAIRWEMR--TRLFLRTSEFLWQEGHTAHST 178

Query: 398 EQMFN-ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIK 456
           E+    E  KI N+     +      ++  +    +K  GS+  +               
Sbjct: 179 EKEAIEETKKILNIYTDFSEKIMAIPVVQGMKPYMDKFSGSETTFS-------------- 224

Query: 457 NSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHS 515
                                  E +++D  G+  Q GT   +  N    F+  + N + 
Sbjct: 225 ----------------------LEAMMQD--GKALQIGTSHFLGQNFSKAFDVKFTNKNG 260

Query: 516 EKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTIT------SSAV 565
           +K +   +    +G   R IG ++    ++    LP  ++PIQ ++  I       S   
Sbjct: 261 KKEY---VWSTSWGVSTRLIGGIVMLHSDDHGLILPPKIAPIQIVIIPIYKNKQELSKIN 317

Query: 566 EYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRF 624
           E A+ I  ++K    S++ D R   T  +K  E+ +K IPI I  G  E  +    + R 
Sbjct: 318 EIAERIQKIIKEKGFSVKYDNREIFTPGWKFHEYEMKGIPIRINIGLDEIIKEKAEVFRR 377

Query: 625 GSTTTQKVS---LLDAIPILTK 643
            +     VS   ++  IP L +
Sbjct: 378 DTYEKVDVSWNQIITFIPKLLE 399


>gi|225680119|gb|EEH18403.1| prolyl-tRNA synthetase [Paracoccidioides brasiliensis Pb03]
          Length = 496

 Score =  145 bits (365), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 68/363 (18%), Positives = 126/363 (34%), Gaps = 64/363 (17%)

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
             ++          K  R  A++P +       +   ++S+R+LP+RL ++ SV R E  
Sbjct: 66  GIDVLKNDDFPGNSKLERKIAIRPTSETVMYPYYAKWIRSHRDLPLRLNQWNSVVRWEFK 125

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFN-ECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
                 +R R F   + H     E     E L+I      +Y++     ++    T  EK
Sbjct: 126 NP-QPFLRTREFLWQEGHTAHLTEAAAREEVLQILEHYAHVYEELLAVPVIRGQKTEKEK 184

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
             G                                      Y    E  +  A GR  Q 
Sbjct: 185 FAGG------------------------------------LYTTTVEGYIP-ATGRGIQG 207

Query: 494 GTIQ-VDFNLPSRFNAFYVNSH---SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW 549
           GT   +  N    F     +      EK   + + +  +G   R IGIM+     +  L 
Sbjct: 208 GTSHGLGQNFSKMFGITVEDPSAKPDEKKPALHVWQNSWGLSTRTIGIMVMVHGDDRGLV 267

Query: 550 LSP----IQAIVTTIT--------SSAVEYAQ--EIANLLKSHHLSIETDFRNETINYKI 595
           L P    +Q ++  +           A  YA+   +A +++   + +E D R+ +  +K 
Sbjct: 268 LPPRVADVQTVIIPVGITAKTTDKERASLYAEIDALAAVIEDAGVRVEVDKRDNSPGWKF 327

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRF---GSTTTQKVSLLDA---IPILTKESLPPD 649
            +  ++ IP+ +  G  E++   +   R    G      + + +    +P L  E++  D
Sbjct: 328 NDWELRGIPLRLEFGPGESTGHFVTTSRRDIPGKDGKSTIPISELKTQVPALL-ETIQAD 386

Query: 650 CQK 652
             K
Sbjct: 387 LYK 389


>gi|319410604|emb|CBY90973.1| prolyl-tRNA synthetase [Neisseria meningitidis WUE 2594]
          Length = 599

 Score =  145 bits (365), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 48/223 (21%), Positives = 85/223 (38%), Gaps = 11/223 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       E+    H+ + R      I  + SG+  W   G ++ + + + +R 
Sbjct: 32  ASQFFISTLKEAPAEAALASHKLMIRAG---LIKANASGLYTWMPMGLRVLRKVENVVRE 88

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E+  P V    LWQ+SG W+ Y   +  +K   D     R F + P      
Sbjct: 89  EMARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHD-----RDFCMGPTCEEVI 143

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP       + +R+E      G+MR R F   DA+ F          
Sbjct: 144 ADIVRKEINSYKQLPKNFYHIQTKFRDEVRPRF-GVMRAREFVMKDAYSFHADYASLQTT 202

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
              +++    I+   G E   V   T      GS      AE+
Sbjct: 203 YDAMYDAYCRIFTRLGLEFRPVAADTGSIGGTGSHEFQVLAES 245



 Score = 81.4 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 62/171 (36%), Gaps = 12/171 (7%)

Query: 484 KDAIGRDWQCGTIQVDFNLPSR---FNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMI 539
            D  GR      I+V      R     A  V+         ++    +G  I R +   I
Sbjct: 424 PDGQGRLKLARGIEVGHVFQLRDKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAI 483

Query: 540 E-NFKGNLPLW---LSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           E N      +W   ++  + ++  +    + +  E A +I   L +    +  D R+E  
Sbjct: 484 EQNNDEKGIIWTKAMASFEVVIVPMNYKKSDTVREAADKIYAELLAAGADVLLDDRDERA 543

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
              + +  +  IP  I+ GD+   E ++          Q +++ + +  +T
Sbjct: 544 GVLLNDSELLGIPHRIVIGDRALKEGNVEYAERRDNEAQAIAIGEIVARVT 594


>gi|330445168|ref|ZP_08308820.1| prolyl-tRNA synthetase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328489359|dbj|GAA03317.1| prolyl-tRNA synthetase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 571

 Score =  145 bits (365), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 51/264 (19%), Positives = 98/264 (37%), Gaps = 12/264 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +   L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R+
Sbjct: 3   TSNYLLSTLKETPNDAEVISHQLMLRAGMIRKLA---SGLYTWLPTGLRVLRKVENIVRQ 59

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           +I      E   P V    LW+++G  +     +        T +  R F L P      
Sbjct: 60  EIDNAGAIETLMPVVQPFELWEETGRSEKMGPELLRF-----TDRHTRPFVLSPTAEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
            ++  + + SY++LP+ L +  + +R+E      G+MR R F   DA+ F    E +   
Sbjct: 115 TSLVRNEVSSYKQLPLNLYQIQTKFRDERRPRF-GVMRAREFCMMDAYSFDIDKEGLQKS 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +H+     +   G E   V   +      GS      AE+    +  + ++     I
Sbjct: 174 YDAMHDAYCKAFDRMGLEYRPVWADSGAIGGNGSQEFHVLAESGEDLIAFSTESDYAANI 233

Query: 464 NTGVLLGEGAFY-GPKFEYILKDA 486
                L        P  E  + D 
Sbjct: 234 EKAEALAPSHDRAAPTVELSVIDT 257



 Score = 91.0 bits (224), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 66/167 (39%), Gaps = 13/167 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           + R  + G I Q+      + N   ++S+ +    V++    +G  + R +   IE    
Sbjct: 405 LKRGIEVGHIFQLGTTYSEKMNCGVLDSNGKN---VILEMGCYGIGVSRVVASAIEQNND 461

Query: 545 N----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                 P  ++P Q  +  +    +    E A+++   L +  + +  D R E       
Sbjct: 462 ENGIIWPDAIAPFQVSIVPMNMAKSEEVKEAAEKLYAELTAAGIDVLFDDRKERPGVMFA 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +H +  IP  I+ G++      +  +   + T + V++ D +  L +
Sbjct: 522 DHELIGIPHTIVIGNRSLENGEMEYKNRRAGTKEAVAVNDVVEFLKQ 568


>gi|153835582|ref|ZP_01988249.1| prolyl-tRNA synthetase [Vibrio harveyi HY01]
 gi|148867822|gb|EDL67058.1| prolyl-tRNA synthetase [Vibrio harveyi HY01]
          Length = 571

 Score =  145 bits (365), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 62/330 (18%), Positives = 115/330 (34%), Gaps = 17/330 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +   L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R+
Sbjct: 3   TSNYLLSTLKETPNDAEVVSHQLMLRAGMIRKLA---SGLYTWLPTGLRVLRKVENIVRQ 59

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           +I      E   P V    LW+++G  +     +        T +  R F L P      
Sbjct: 60  EIDNAGAVETLMPVVQPFELWEETGRSEKMGPELLRF-----TDRHTRPFVLSPTAEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
            ++  + + SY++LP+ L +  + +R+E      G+MR R F   DA+ F    E +   
Sbjct: 115 TSLVRNEVSSYKQLPLNLYQIQTKFRDERRPRF-GVMRAREFCMMDAYSFDIDKEGLEKS 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +H+     +   G E   V   +      GS      AE+    +  + ++     I
Sbjct: 174 YQAMHDAYCKAFDRMGLEYRPVLADSGAIGGSGSQEFHVLAESGEDLIAFSTESDYAANI 233

Query: 464 NTGVLLGEGAFYG-PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
                         P  E  L D          ++       +         S++    +
Sbjct: 234 EKAEAAAPAGERAEPTQEMTLVDTPNAKTIVELVEQHGLAIEKTVKTLFVKASDEVDADI 293

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
           I   V G  E     + E    NLP   SP
Sbjct: 294 IALIVRGDHE-----LNEVKAENLPQVASP 318



 Score = 86.8 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 60/168 (35%), Gaps = 13/168 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           + R  + G I Q+        N   +    +    V++    +G  + R +   IE    
Sbjct: 405 LKRGIEVGHIFQLGNVYSQAMNCGVLGPDGKN---VILEMGCYGIGVSRVVASAIEQNHD 461

Query: 545 N----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                 P  L+P Q  +  +    +    E A+++   L +  + +  D R E       
Sbjct: 462 KYGIIWPDALAPFQVAIVPMNMHKSEEVKEAAEKLYAELTAMGIEVLFDDRKERPGVMFS 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  +  IP  I+ GD+   E +   +   S     V++ D +  +  +
Sbjct: 522 DMELIGIPHTIVIGDRSMKEGNFEYKNRRSGEKTAVAMADIVEHVKAQ 569


>gi|238897616|ref|YP_002923295.1| proline tRNA synthetase [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
 gi|259511602|sp|C4K3K4|SYP_HAMD5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|229465373|gb|ACQ67147.1| proline tRNA synthetase [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
          Length = 579

 Score =  145 bits (365), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 48/246 (19%), Positives = 94/246 (38%), Gaps = 11/246 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            TQ  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TTQYLLSTLKELPADAEIISHQLMLRAGMIRKLA---SGLYTWLPTGTRVLKKIENIVRE 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LWQ+S  W+ Y   +       +     R F L P +    
Sbjct: 60  EMNKAGAIEVVMPIVQPADLWQESERWEHYGPELLRFADRSE-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNE 403
             +  + + SY++LP+   +  + +R+E      G+MR R F   DA+ F  T E +   
Sbjct: 115 TDLVRNEISSYKQLPLNFFQIQTKFRDEIRPRF-GIMRAREFLMKDAYSFHNTLESLQET 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I++        V+  T       S      A++    ++ +  +     I
Sbjct: 174 YQTMYQAYTKIFERMQLNFRAVQADTGSIGGSRSHEFQVLADSGEDEIVFSTVSDFAANI 233

Query: 464 NTGVLL 469
                L
Sbjct: 234 ELAEAL 239



 Score = 88.3 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 62/169 (36%), Gaps = 15/169 (8%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           I R  + G I Q+         A     +  +    M+    +G  + R +   IE +  
Sbjct: 405 IKRGIEVGHIFQLGTKYSQAMGAKVQGENGRQQ---MMIMGCYGIGVSRLVAAAIEQHHD 461

Query: 544 GNLPLWL---SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
            +  LW    +P Q  +  I    + +  + A+ +   L S  + +  D R E       
Sbjct: 462 QHGILWPEAIAPFQVAILPIHLKKSDAVRQEAERLYAELSSLGMDVIFDDRQERPGVMFA 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFG--STTTQKVSLLDAIPILTK 643
           +  +  IP  +I GD++     +  R  G      Q++ + D +  L +
Sbjct: 522 DMELIGIPHTLIIGDRDLENNELEYRYRGIDDHKKQQLKISDVVSFLLE 570


>gi|169621698|ref|XP_001804259.1| hypothetical protein SNOG_14060 [Phaeosphaeria nodorum SN15]
 gi|160704311|gb|EAT78685.2| hypothetical protein SNOG_14060 [Phaeosphaeria nodorum SN15]
          Length = 568

 Score =  145 bits (365), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 77/430 (17%), Positives = 151/430 (35%), Gaps = 68/430 (15%)

Query: 249 LAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ- 306
           +    D F      +G        + I++++ ++   +IK         P  +     + 
Sbjct: 71  MISYYDTFG-RILMTGSYILEPSSYAIWESIKAWFDNQIKTLKVRNAYFPIFISADNLER 129

Query: 307 QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFG 366
           +  H + + A +  V     +  +    A++P +       F   ++S+R+LP++L ++ 
Sbjct: 130 EKEHVEGFAAEVAWVTKGGKSDLEK-PVAVRPTSETAMYPYFARKIQSHRDLPLKLNQWN 188

Query: 367 SVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
           +V R E    +   +R R F   + H    TK++  +E L+I +    +Y+D        
Sbjct: 189 NVVRWEFKHPM-PFIRSREFLWQEGHTAHLTKKEASDEVLQILDWYSDVYQDL------- 240

Query: 426 KLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKD 485
                                        +         T      GA Y    E  +  
Sbjct: 241 -----------------------------LAVPVVKGTKTVNEKFPGADYTTTIEGFIP- 270

Query: 486 AIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC----HPVMIHRAVFGSIERFIGIMI-- 539
           A GR  Q  T        S+     V   + K       V + +  +G   R IG+MI  
Sbjct: 271 ATGRGIQAATSHCLGQHFSKMFNITVEDPNAKEAGKSEHVHVWQNSWGLTTRSIGVMILT 330

Query: 540 --ENFKGNLPLWLSPIQAIVTTIT----------SSAVEYAQEIANLLKSHHLSIETDFR 587
             +N    +P  ++ IQ +V  +            S     ++I+  L    + +ETD+R
Sbjct: 331 HGDNRGLVIPPRVAEIQVVVIPVGVSAKMSAEDKESLYSKVKKISEDLVEAGVRVETDYR 390

Query: 588 -NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT----QKVSLLDAIPILT 642
              +  +K  +  +K IP+ I  G K+A +  +   R   +        +++ D    + 
Sbjct: 391 EGYSPGWKFNDWELKGIPLRIEFGPKDAEKGVVTTSRRDISDKDAARGTINVDDLTKEVP 450

Query: 643 K--ESLPPDC 650
           K  E +  D 
Sbjct: 451 KLLEKIQKDM 460


>gi|160876111|ref|YP_001555427.1| prolyl-tRNA synthetase [Shewanella baltica OS195]
 gi|189083513|sp|A9KVR8|SYP_SHEB9 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|160861633|gb|ABX50167.1| prolyl-tRNA synthetase [Shewanella baltica OS195]
 gi|315268308|gb|ADT95161.1| prolyl-tRNA synthetase [Shewanella baltica OS678]
          Length = 571

 Score =  145 bits (365), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 45/245 (18%), Positives = 90/245 (36%), Gaps = 11/245 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  L+        +E   H+ + R   +     + SG+  +   G ++ + + + +R +
Sbjct: 4   SKYLLSTQKETPANAEVISHQLMLRAGMIR---RNASGLYSYLPTGLRVLRKVEAIVREE 60

Query: 287 IK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      EI  P V    LW ++G W+ +   +   K      +  R F L P +     
Sbjct: 61  MNKAGAIEILMPMVQPADLWVETGRWEKFGPELLRFKD-----RHNRDFVLGPTHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +    + SY++LP+ L +  + +R+E      G+MR R F   DA+ F    + M    
Sbjct: 116 DLIRKEVSSYKQLPLNLYQIQTKFRDEVRPRF-GMMRSREFLMKDAYSFHLDVDTMNETY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
             ++N   +I    G     V   T       S      A++    +  +  +     I 
Sbjct: 175 EAMYNAYSNILTRMGLAFRPVLADTGSIGGSMSHEFHVLAQSGEDLIAYSTGSDYAANIE 234

Query: 465 TGVLL 469
                
Sbjct: 235 KAESP 239



 Score = 83.3 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 25/166 (15%), Positives = 56/166 (33%), Gaps = 9/166 (5%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           A+ R  + G I Q+  N     NA  ++ +  K   +++     G        + +NF  
Sbjct: 403 AMARGIEVGHIFQLGTNYSKSMNATVLDENG-KSQVLLMGCYGVGVSRIVAAAIEQNFDD 461

Query: 545 NLPLWL---SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
              +W    +P    +  +    +    + A+++   L    + +  D R E       +
Sbjct: 462 RGIIWPEAIAPFSVGILPMNMHKSHRVTDIAEQLYKDLNEAGIDVLLDDRKERPGVMFAD 521

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             +  IP  ++ GD+         +   +   Q +     +  L  
Sbjct: 522 MELIGIPHTVVIGDRNIDAGVFEYKNRRTGEKQDIPFDQLLDFLKN 567


>gi|294056086|ref|YP_003549744.1| prolyl-tRNA synthetase [Coraliomargarita akajimensis DSM 45221]
 gi|293615419|gb|ADE55574.1| prolyl-tRNA synthetase [Coraliomargarita akajimensis DSM 45221]
          Length = 506

 Score =  145 bits (365), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 60/442 (13%), Positives = 151/442 (34%), Gaps = 75/442 (16%)

Query: 228 QQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI 287
           ++          E     ++++ +  DL   +     ++     G+ I++ +   + R+ 
Sbjct: 3   KKAQNAIAPTRAEDYPEWYQQVVKAADLAETSPVRGCMVI-KPWGYAIWENIQRELDRRF 61

Query: 288 KD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKD----------LRTFA 335
           K+  ++    P  +      +++ H + +      V  +     +               
Sbjct: 62  KETGHKNAYFPLFIPMSFLQKEADHVEGFAKECAVVTHSRLEADEDGKLQPAGPLEEPLI 121

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC 395
           ++P +      +F+  ++SYR+LP+ + ++ +V R E        +R   F   + H   
Sbjct: 122 VRPTSETIIGELFSKWVQSYRDLPLLINQWANVVRWEMR--TRLFLRTAEFLWQEGHTVH 179

Query: 396 -TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDT 454
            T E+   E  K+  +     + +    ++    T  E+  G+DA +             
Sbjct: 180 ATSEEAMEETRKMLEVYADFAESYMAMPVITGEKTEAERFPGADATF------------- 226

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNS 513
                                    E +++D   +  Q GT   +  N     +  Y+++
Sbjct: 227 -----------------------AIEAMMQDR--KALQAGTSHFLGQNFAKSSDIKYLSA 261

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSS------ 563
             ++ +        +G   R +G +I    ++    LP  ++P   ++  +T        
Sbjct: 262 EGKEEYA---WTTSWGVSTRLVGGLIMTHSDDDGLVLPPRIAPSHVVIIPVTPKEETRQQ 318

Query: 564 AVEYAQEIANLLKSH---HLSIET--DFRNETINYKIREHSIKKIPIIIICGDKEASERS 618
            ++Y  E+   L++       ++   D R+     K      K IP+ +  G ++    S
Sbjct: 319 VLDYCLELKQQLEAQSFLDGRVKVEFDDRDMRGGEKAWGWIKKGIPVRVEVGPRDMENGS 378

Query: 619 IGI--RRFGSTTTQKVSLLDAI 638
           + +  R       Q +   + +
Sbjct: 379 VFVGRRDRAPKDKQGIPRDEFV 400


>gi|161870212|ref|YP_001599382.1| prolyl-tRNA synthetase [Neisseria meningitidis 053442]
 gi|161595765|gb|ABX73425.1| prolyl-tRNA synthetase [Neisseria meningitidis 053442]
          Length = 599

 Score =  145 bits (365), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 47/223 (21%), Positives = 84/223 (37%), Gaps = 11/223 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       E+    H+ + R      I  + SG+  W   G ++ + + + +R 
Sbjct: 32  ASQFFISTLKEAPAEAALASHKLMIRAG---LIKANASGLYTWMPMGLRVLRKVENVVRE 88

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E+  P V    LWQ+SG W+ Y   +  +K   D     R F + P      
Sbjct: 89  EMARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHD-----RDFCMGPTCEEVI 143

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP       + +R+E      G+MR R F   DA+ F          
Sbjct: 144 ADIVRKEINSYKQLPKNFYHIQTKFRDEVRPRF-GVMRAREFVMKDAYSFHADYASLQTT 202

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
              +++    I+   G     V   T      GS      AE+
Sbjct: 203 YDAMYDSYCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAES 245



 Score = 86.0 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 64/171 (37%), Gaps = 12/171 (7%)

Query: 484 KDAIGRDWQCGTIQVDFNLPSR---FNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMI 539
            D  GR      I+V      R     A  V+         ++    +G  I R +   I
Sbjct: 424 PDGQGRLKLARGIEVGHVFQLRDKYTKAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAI 483

Query: 540 E-NFKGNLPLW---LSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           E N      +W   ++P + ++  +    + +  E A +I   L +    +  D R+E  
Sbjct: 484 EQNNDEKGIIWTKAMAPFEVVIVPMNYKKSDTVREAADKIYAELLAAGADVLLDDRDERA 543

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
              + +  +  IP  I+ GD+   E ++      +   Q V++ + +  +T
Sbjct: 544 GVLLNDSELLGIPHRIVIGDRALKEGNVEYAERRNNEAQAVAIGEIVARVT 594


>gi|220904224|ref|YP_002479536.1| prolyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|254782896|sp|B8IZD1|SYP_DESDA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|219868523|gb|ACL48858.1| prolyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 574

 Score =  144 bits (364), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 47/207 (22%), Positives = 87/207 (42%), Gaps = 11/207 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           ++E   H+ L R   +  +    SG+  +   G ++   +   +R +++   + E+  P 
Sbjct: 17  DAEVISHKLLLRAGMVRRL---TSGLYIYLPLGLRVINKIARTVREEMEKAGFRELLMPM 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    LW+++G W+ Y   +   K  ++     R + L P +      +    ++SYR+L
Sbjct: 74  VQPGDLWKETGRWEHYGKELLRFKDRNE-----REYCLGPTHEEVITDLVRGEVRSYRQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKD 417
           PVRL +  + +R+E      GLMR R F   D + F  T E        +++  +SI+  
Sbjct: 129 PVRLYQVQTKFRDEIRPRF-GLMRGREFMMKDGYSFDATAEGAEESYKIMYDAYMSIFSR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDA 444
            G     V+  T       S      A
Sbjct: 188 LGLRFRAVEADTGSIGGNFSHEFMVLA 214



 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 24/153 (15%), Positives = 55/153 (35%), Gaps = 10/153 (6%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G I  +        +A +++ +  K   +++     G   R     IE       
Sbjct: 402 RGIEVGHIFMLGLKYSEAMHAVFLDENG-KERTMIMGCYGIGVS-RVAAAAIEQNHDEHG 459

Query: 546 --LPLWLSPIQAIVT---TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              P  ++P + ++      +       +EI  LL+   + +  D R E    K ++  +
Sbjct: 460 IVFPPPVAPFECVLLNLDPRSEEVNAKVEEIYALLQGMGIEVLLDDREERPGVKFKDADL 519

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
             IP+ ++ G K      +  +   +    ++S
Sbjct: 520 LGIPMQLVVGGKGLGRGIVECKDRRTGEKGELS 552


>gi|164685792|ref|ZP_01945930.2| prolyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
 gi|165918393|ref|ZP_02218479.1| prolyl-tRNA synthetase [Coxiella burnetii RSA 334]
 gi|164601306|gb|EAX33436.2| prolyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
 gi|165917899|gb|EDR36503.1| prolyl-tRNA synthetase [Coxiella burnetii RSA 334]
          Length = 564

 Score =  144 bits (364), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 47/222 (21%), Positives = 84/222 (37%), Gaps = 11/222 (4%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
            H+ + R        +  SG+  W   G ++ Q +   +R ++      E+  P V    
Sbjct: 22  SHQLMIRAGM---FRKLASGLYTWLPLGLRVLQKVADVVREEMNRAGALELLMPIVQPAS 78

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LWQ+SG W++Y A +  +       +    F   P +      +    LKSY++LP+   
Sbjct: 79  LWQESGRWEAYGAELLRIMD-----RHQNGFCFGPTHEEVITDIARQELKSYKQLPLNFY 133

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFEK 422
           +  + +R+E      G+MR R F   DA+ F   E+       K+ +    I+   G   
Sbjct: 134 QIQTKFRDEIRPRF-GVMRSREFLMKDAYSFDLDEKGMQAAYEKMFDAYRRIFTRLGLNF 192

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
             V   T       S      A+     V+ + ++     I 
Sbjct: 193 RAVLADTGAIGGDYSHEFQVLADVGEDTVVYSDESDYAANIE 234



 Score = 68.3 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 23/162 (14%), Positives = 51/162 (31%), Gaps = 9/162 (5%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G + Q+      + NA  V+   +  +  M      G        + +N      
Sbjct: 404 RGIEVGQVFQLGDKYSRKMNATVVDELGKSRYLQM-GCYGIGVSRTVAAAIEQNHDERGI 462

Query: 548 LWLSPIQAIVTTITS-------SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +W +P+      +            E  +++ N L      +  D R E       +  +
Sbjct: 463 IWPTPMAPFFIALVPVNMHKSYRVREACEKLYNELIDAGYEVLWDDRKERPGVMFADMDL 522

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             IP  ++  +       +  +   S   + VSL + + +  
Sbjct: 523 IGIPHRLVISESGLDRGIVEYKARKSKEAENVSLENVLSVFR 564


>gi|126175060|ref|YP_001051209.1| prolyl-tRNA synthetase [Shewanella baltica OS155]
 gi|166980155|sp|A3D6H7|SYP_SHEB5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|125998265|gb|ABN62340.1| prolyl-tRNA synthetase [Shewanella baltica OS155]
          Length = 571

 Score =  144 bits (364), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 45/245 (18%), Positives = 90/245 (36%), Gaps = 11/245 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  L+        +E   H+ + R   +     + SG+  +   G ++ + + + +R +
Sbjct: 4   SKYLLSTQKETPANAEVISHQLMLRAGMIR---RNASGLYSYLPTGLRVLRKVEAIVREE 60

Query: 287 IK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      EI  P V    LW ++G W+ +   +   K      +  R F L P +     
Sbjct: 61  MNKAGAIEILMPMVQPADLWVETGRWEKFGPELLRFKD-----RHNRDFVLGPTHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +    + SY++LP+ L +  + +R+E      G+MR R F   DA+ F    + M    
Sbjct: 116 DLIRKEVSSYKQLPLNLYQIQTKFRDEVRPRF-GMMRSREFLMKDAYSFHLDVDTMNETY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
             ++N   +I    G     V   T       S      A++    +  +  +     I 
Sbjct: 175 EAMYNAYSNILTRMGLAFRPVLADTGSIGGSMSHEFHVLAQSGEDLIAYSTGSDYAANIE 234

Query: 465 TGVLL 469
                
Sbjct: 235 KAESP 239



 Score = 84.1 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 25/166 (15%), Positives = 57/166 (34%), Gaps = 9/166 (5%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           A+ R  + G I Q+  N     NA  ++ +  K   +++     G        + +NF  
Sbjct: 403 AMARGIEVGHIFQLGTNYSKSMNATVLDENG-KSQVLLMGCYGVGVSRIVAAAIEQNFDD 461

Query: 545 NLPLWL---SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
              +W    +P    +  +    +    + A+++   L    + +  D R E       +
Sbjct: 462 RGIIWPEAIAPFSVGILPMNMHKSHRVTDIAEQLYKDLNEAGIDVLLDDRKERPGVMFAD 521

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             +  IP  ++ GD+         +   +   Q +     + +L  
Sbjct: 522 MELIGIPHTVVIGDRNIDAGVFEYKNRRTGEKQDIPFDQLLDLLKN 567


>gi|325144523|gb|EGC66822.1| prolyl-tRNA synthetase [Neisseria meningitidis M01-240013]
 gi|325208298|gb|ADZ03750.1| prolyl-tRNA synthetase [Neisseria meningitidis NZ-05/33]
          Length = 599

 Score =  144 bits (364), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 47/223 (21%), Positives = 84/223 (37%), Gaps = 11/223 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       E+    H+ + R      I  + SG+  W   G ++ + + + +R 
Sbjct: 32  ASQFFISTLKEAPAEAALASHKLMIRAG---LIKANASGLYTWMPMGLRVLRKVENVVRE 88

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E+  P V    LWQ+SG W+ Y   +  +K   D     R F + P      
Sbjct: 89  EMARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHD-----RDFCMGPTCEEVI 143

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP       + +R+E      G+MR R F   DA+ F          
Sbjct: 144 ADIVRKEINSYKQLPKNFYHIQTKFRDEVRPRF-GVMRAREFVMKDAYSFHADYASLQTT 202

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
              +++    I+   G     V   T      GS      AE+
Sbjct: 203 YDAMYDAYCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAES 245



 Score = 86.0 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 64/171 (37%), Gaps = 12/171 (7%)

Query: 484 KDAIGRDWQCGTIQVDFNLPSR---FNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMI 539
            D  GR      I+V      R     A  V+         ++    +G  I R +   I
Sbjct: 424 PDGQGRLKLARGIEVGHVFQLRDKYTQAMNVSFLDNNGKSQVMEMGCYGIGITRVVAAAI 483

Query: 540 E-NFKGNLPLW---LSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           E N      +W   ++P + ++  +    + +  E A +I   L +    +  D R+E  
Sbjct: 484 EQNNDEKGIIWTKAMAPFEVVIVPMNYKKSDTVREAADKIYAELLAAGADVLLDDRDERA 543

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
              + +  +  IP  I+ GD+   E ++      +   Q V++ + +  +T
Sbjct: 544 GVLLNDSELLGIPHRIVIGDRALKEGNVEYAERRNNEAQAVAIGEIVARVT 594


>gi|302879510|ref|YP_003848074.1| prolyl-tRNA synthetase [Gallionella capsiferriformans ES-2]
 gi|302582299|gb|ADL56310.1| prolyl-tRNA synthetase [Gallionella capsiferriformans ES-2]
          Length = 569

 Score =  144 bits (364), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 49/235 (20%), Positives = 91/235 (38%), Gaps = 12/235 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  ++       E+E   H  + R   +  +A   SG+  W   G +  + + + +R +
Sbjct: 4   SQFFISTLKEAPSEAELPSHILMMRAGYIRKLA---SGLYTWMPLGLRALRKVEAIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           + +    E+  P V    LW ++G W+ +   M  +K      +    F   P +     
Sbjct: 61  MNNSGAIELLMPAVQPAELWDETGRWEVFGPQMLKIKD-----RHNNQFCFGPTHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +    ++SYR+LPV   +  + +R+E      G+MR R F   DA+ F    + +    
Sbjct: 116 DIARREIRSYRQLPVNFYQIQTKFRDEVRPRF-GVMRAREFLMKDAYSFHADFDSLEQTY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSS 459
             ++     I+   G +   V   T      GS      A +  +  L    NSS
Sbjct: 175 AVMYQTYSRIFTRLGLKFRAVAADTGAIGGSGSHEFHVLA-DSGEDALAYCPNSS 228



 Score = 77.1 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 61/163 (37%), Gaps = 11/163 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG--- 544
           R  + G I Q+     +   A ++++  +     M    +   + R +   IE       
Sbjct: 406 RGIEVGHIFQLRTKYAADMKATFLDAQGKAQTLEMGCYGI--GVSRIVAAAIEQNHDPRG 463

Query: 545 -NLPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
             LP  ++P Q  +  I    + +    A+++   LK+  + +  D R+E       +  
Sbjct: 464 ITLPAAIAPFQVALVPIGMNKSEAVRAAAEQLYAELKASDIEVLFDDRDERPGVMFADME 523

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +  IP  I+ GD+   E  I  +         + L +A+  + 
Sbjct: 524 LIGIPHRIVVGDRGLKEGLIEYQGRRDDAALSIPLQNALEFIQ 566


>gi|212219440|ref|YP_002306227.1| prolyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
 gi|212013702|gb|ACJ21082.1| prolyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
          Length = 566

 Score =  144 bits (364), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 47/222 (21%), Positives = 84/222 (37%), Gaps = 11/222 (4%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
            H+ + R        +  SG+  W   G ++ Q +   +R ++      E+  P V    
Sbjct: 24  SHQLMIRAGM---FRKLASGLYTWLPLGLRVLQKVADVVREEMNRAGALELLMPIVQPAS 80

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LWQ+SG W++Y A +  +       +    F   P +      +    LKSY++LP+   
Sbjct: 81  LWQESGRWEAYGAELLRIMD-----RHQNGFCFGPTHEEVITDIARQELKSYKQLPLNFY 135

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFEK 422
           +  + +R+E      G+MR R F   DA+ F   E+       K+ +    I+   G   
Sbjct: 136 QIQTKFRDEIRPRF-GVMRSREFLMKDAYSFDLDEKGMQAAYEKMFDAYRRIFTRLGLNF 194

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
             V   T       S      A+     V+ + ++     I 
Sbjct: 195 RAVLADTGAIGGDYSHEFQVLADVGEDTVVYSDESDYAANIE 236



 Score = 68.3 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 23/162 (14%), Positives = 51/162 (31%), Gaps = 9/162 (5%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G + Q+      + NA  V+   +  +  M      G        + +N      
Sbjct: 406 RGIEVGQVFQLGDKYSRKMNATVVDELGKSRYLQM-GCYGIGVSRTVAAAIEQNHDERGI 464

Query: 548 LWLSPIQAIVTTITS-------SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +W +P+      +            E  +++ N L      +  D R E       +  +
Sbjct: 465 IWPTPMAPFFIALVPVNMHKSYRVREACEKLYNELIDAGYEVLWDDRKERPGVMFADMDL 524

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             IP  ++  +       +  +   S   + VSL + + +  
Sbjct: 525 IGIPHRLVISESGLDRGIVEYKARKSKEAENVSLENVLSVFR 566


>gi|159110155|ref|XP_001705339.1| Prolyl-tRNA synthetase [Giardia lamblia ATCC 50803]
 gi|157433422|gb|EDO77665.1| Prolyl-tRNA synthetase [Giardia lamblia ATCC 50803]
          Length = 542

 Score =  144 bits (364), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 79/468 (16%), Positives = 165/468 (35%), Gaps = 71/468 (15%)

Query: 195 KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMD 254
           K    +++        D ++     I G       ++T  L    ++       +    +
Sbjct: 7   KDSHGIVRGKQCNTARDQSKQQKQAIRGG------DVTFSLTKTRDTFADWFDAIMDAAE 60

Query: 255 LFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHL-WQQSGHWD 312
           L        G + +   G+ +   ++     +       +I  P V+ +    ++S H  
Sbjct: 61  LVDRRYPVKGCVVFRPYGFFMENAIMRLCEEEYAKVGISQILFPTVIPESFLKKESDHIK 120

Query: 313 SYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE 372
            + A  F V+       + R  AL+P +     ++F+  ++SY++LP+++ +  +++R+E
Sbjct: 121 GFEAECFWVEKGGLQPLEER-LALRPTSETAIYSMFSKWVRSYKDLPLKIHQTCTIFRHE 179

Query: 373 PSGSLHGLMRVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP 431
              +   L+RVR    ++AH    T E   ++      +I      F  E        R 
Sbjct: 180 TK-NTKPLIRVREIHWNEAHCCHATAEDAVSQLSDYWKVID---TIFSDELCFKGQKLRR 235

Query: 432 EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDW 491
                    WD                             GA Y    + ++    GR  
Sbjct: 236 V-------CWDRF--------------------------PGADYSEVSDVVMPC--GRVL 260

Query: 492 QCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG----IMIENFKGNL 546
           Q   I  +     S F+  Y N  +E  HP +      G   R +     I  ++    L
Sbjct: 261 QTAGIHNLGQRFSSTFDILYANKANESVHPYL---TCAGISTRVLACALSIHGDSGGLVL 317

Query: 547 PLWLSPIQAIVTTIT----------SSAVEYAQEIANLLKSH-HLSIETDFR-NETINYK 594
           P  ++PI  ++  I              +    EIA+ LKS   L +  D   ++++  K
Sbjct: 318 PPLIAPIHVVIIPIGCGKKNNQESDQQVLGKVNEIADTLKSKLGLRVSIDDDFSKSMGDK 377

Query: 595 IREHSIKKIPIIIICGDKEASERS--IGIRRFGSTTTQKVSLLDAIPI 640
           +  + +K +P+ I  G ++ +     +  R  G    + + + + + +
Sbjct: 378 LYYYELKGVPLRIEVGQRDLANGQCIVVPRDVGKDQKRVIPITEVMKV 425


>gi|304440717|ref|ZP_07400601.1| proline--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
 gi|304370904|gb|EFM24526.1| proline--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
          Length = 582

 Score =  144 bits (364), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 39/217 (17%), Positives = 85/217 (39%), Gaps = 12/217 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           T+  +        ++E   H+ L R   +       +G+  +   G+++ + +   +R +
Sbjct: 4   TKLYMPTLREVPTDAEVESHKLLLRAAMIR---RSTTGIYSYLPLGYRVVRKIEQIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +EI    +    +W++SG WD +   MF +       ++ R F L P       
Sbjct: 61  MDRAGSQEILMSAIQPAEIWEESGRWDKFGPEMFKLVD-----RNGRDFCLGPTAEEYFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    + SY++LP+ + +  + YR+E      G+ R R F   DA+ F   E+   +  
Sbjct: 116 TLVKDEVSSYKQLPLNIYQIQTKYRDEKRPRF-GINRAREFLMKDAYSFDKDEEGLQKSY 174

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWD 442
            ++    +    F    +  K+       +G     +
Sbjct: 175 DMY--YKAYQNVFDRLSLDYKIVEGDNGAMGGHMSHE 209



 Score = 77.1 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 69/166 (41%), Gaps = 11/166 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G I Q+        +A +++ + +  + VM    +   + R +  ++E +  +  
Sbjct: 404 RGIEVGNIFQLGTKYSEALDATFLDENGKSQYFVMGSYGI--GVTRSVSAVVEQYHDDHG 461

Query: 546 --LPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              P+ ++P Q I+T +       +E  +++   L +    +  D RN     K  +  +
Sbjct: 462 IVWPMAIAPYQIIITVMNPKKEEQLELGEKLHAALVNMGYEVLLDDRNVGAGVKFNDRDL 521

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
             IP+ I  G K A +  +   R  +    +++  +AI  +  E +
Sbjct: 522 IGIPLRITVGKK-AQDSIVEFSRRDNRENIEMTSKEAIDRVVSEMI 566


>gi|219685452|ref|ZP_03540270.1| proline--tRNA ligase [Borrelia garinii Far04]
 gi|219673008|gb|EED30029.1| proline--tRNA ligase [Borrelia garinii Far04]
          Length = 488

 Score =  144 bits (364), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 76/431 (17%), Positives = 155/431 (35%), Gaps = 61/431 (14%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
           ++ ++   E+   + +  + ++  L   +     ++     G+ I+  + S + +K K+ 
Sbjct: 1   MSDFIASKEDDYSKWYLDIVQKAKLADYSPVKGCMVI-MPYGYSIWSKIQSILDKKFKET 59

Query: 290 DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
            +E    P ++     + +  H + +      +K A           L+P +      ++
Sbjct: 60  GHENAYFPMLIPYGFLEKEKDHIEGFSPEFAIIKEAGGESL-AEPLILRPTSETIIWNMY 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
           +  +KSYR+LP+++ ++ +V R E        +R   F   + H   T      E L+  
Sbjct: 119 SKWIKSYRDLPLKINQWANVVRWEKR--TRPFLRTTEFLWQEGH---TAHATEEEALEET 173

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
            LI+ +YK F                          E+ +   +   K S +++      
Sbjct: 174 LLILDLYKRF-------------------------MEDYLAIPVFCGKKSEKEKF----- 203

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAV 527
              GA      E +++D   +  Q  T      N    F+  + +   +  H   +  + 
Sbjct: 204 --AGAVSTYSIEALMQD--KKALQAATSHYLGLNFAKAFDVKFQDKDGKMRH---VFASS 256

Query: 528 FGSIERFIGIMIENFKGN----LPLWLSPIQAIVTT-------ITSSAVEYAQEIANLLK 576
           +G   R IG +I          LP  ++PI+ IV         I    ++Y+  + N LK
Sbjct: 257 WGVSTRLIGALIMVHSDEKGLILPPRIAPIEIIVIPIFKKEDEINKKILDYSDCVVNALK 316

Query: 577 SHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT--TQKVS 633
                +E D     +  ++      K IPI I  G  +    S+ I R         ++S
Sbjct: 317 KAEFRVEIDKDVRSSPGFRFSSAEFKGIPIRIEVGINDVLLNSVTIVRRDKDRKFKYQIS 376

Query: 634 LLDAIPILTKE 644
           L      +  E
Sbjct: 377 LDSLASKVKIE 387


>gi|291533302|emb|CBL06415.1| Threonyl-tRNA synthetase [Megamonas hypermegale ART12/1]
          Length = 133

 Score =  144 bits (364), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 48/120 (40%), Positives = 77/120 (64%), Gaps = 3/120 (2%)

Query: 6   KLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITP 64
            +T  DG+++      T  D  +S S SLAKKA+A  I+G+  DL   +  +  +EI+T 
Sbjct: 3   NITLKDGAVREVAEGTTVLDFVKSFSNSLAKKALACKIDGETKDLMTVIDGDHQVEILTF 62

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPE--VQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           ED      +RHS +HI+A+AV+ ++ +  V++AIGP I++GFYYDFD +   S+++LA+I
Sbjct: 63  EDEDGRWALRHSASHILAQAVKRLYGDKNVKLAIGPAIDNGFYYDFDMDHQLSTEDLAKI 122


>gi|325132465|gb|EGC55158.1| prolyl-tRNA synthetase [Neisseria meningitidis M6190]
          Length = 599

 Score =  144 bits (364), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 49/275 (17%), Positives = 93/275 (33%), Gaps = 27/275 (9%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       E+    H+ + R      I  + SG+  W   G ++ + + + +R 
Sbjct: 32  ASQFFISTLKEAPAEAALASHKLMIRAG---LIKANASGLYTWMPMGLRVLRKVENVVRE 88

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E+  P V    LWQ+SG W+ Y   +  +K   D     R F + P      
Sbjct: 89  EMARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHD-----RDFCMGPTCEEVI 143

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP       + +R+E      G+MR R F   DA+ F          
Sbjct: 144 ADIVRKEINSYKQLPKNFYHIQTKFRDEVRPRF-GVMRAREFVMKDAYSFHADYASLQTT 202

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +++    I+   G     V   T      GS      AE+                 
Sbjct: 203 YDAMYDAYCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAESG---------------- 246

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
              +   + + Y    E      +  +      ++
Sbjct: 247 EDVIAYSDTSDYAANIELAPTLPLKGERTAAQAEL 281



 Score = 86.0 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 64/171 (37%), Gaps = 12/171 (7%)

Query: 484 KDAIGRDWQCGTIQVDFNLPSR---FNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMI 539
            D  GR      I+V      R     A  V+         ++    +G  I R +   I
Sbjct: 424 PDGQGRLKLARGIEVGHVFQLRDKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAI 483

Query: 540 E-NFKGNLPLW---LSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           E N      +W   ++P + ++  +    + +  E A +I   L +    +  D R+E  
Sbjct: 484 EQNNDEKGIIWTKAMAPFEVVIVPMNYKKSDAVREAADKIYAELLAAGADVLLDDRDERA 543

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
              + +  +  IP  I+ GD+   E ++      +   Q V++ + +  +T
Sbjct: 544 GVLLNDSELLGIPHRIVIGDRALKEGNVEYAERRNNEAQAVAIGEIVARVT 594


>gi|294783936|ref|ZP_06749258.1| proline--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
 gi|294479748|gb|EFG27527.1| proline--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
          Length = 567

 Score =  144 bits (364), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 55/246 (22%), Positives = 98/246 (39%), Gaps = 11/246 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  +       +E+E   H+ + R   +  +A   SG+  +   G++  + + + +R 
Sbjct: 3   FSKAYIKTLKETPKEAEIVSHKLMLRAAMIKKLA---SGIYAYLPLGYRTIRKIENIIRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LWQ+SG WD   A M  +K      +  R F L P      
Sbjct: 60  EMDRAGALELLMPVVQPAELWQESGRWDVMGAEMLRLKD-----RHERDFVLSPTQEEMI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
            ++    + SY+ LP+ L    + +R+E      GLMR R FT  D + F T  E +  E
Sbjct: 115 TSIVRSDISSYKSLPLNLYHIQTKFRDERRPRF-GLMRGREFTMKDGYSFHTSQESLDEE 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            L + +    I+   G +   V   +      GS      AE+    ++ +  +     I
Sbjct: 174 FLNMRDAYTRIFTRCGLKFRPVDADSGNIGGSGSQEFQVLAESGEDEIIYSDGSEYAANI 233

Query: 464 NTGVLL 469
              V  
Sbjct: 234 EKAVSE 239



 Score = 88.3 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 27/162 (16%), Positives = 65/162 (40%), Gaps = 9/162 (5%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  +CG I  +        NA Y++ + +  + +++     G        + +N   N  
Sbjct: 403 RGIECGQIFKLGDKYSKAMNATYLDENGKTQY-MLMGCYGIGVTRTMAAAIEQNNDENGI 461

Query: 548 LWLSPIQAIVTTI------TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W   I   +  +          V  A++I N L++  + +  D R+E   +K ++  + 
Sbjct: 462 IWPVSIAPYIVDVIPANIKNEGQVSLAEKIYNELQAEDIDVMLDDRDEKPGFKFKDADLI 521

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             P  ++ G +   E  + ++   +  T +VS  + +  + +
Sbjct: 522 GFPFKVVVGKR-VDEGIVEVKIRRTGETLEVSESEVVAKIKE 562


>gi|149918430|ref|ZP_01906920.1| prolyl-tRNA synthetase [Plesiocystis pacifica SIR-1]
 gi|149820730|gb|EDM80140.1| prolyl-tRNA synthetase [Plesiocystis pacifica SIR-1]
          Length = 517

 Score =  144 bits (364), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 64/418 (15%), Positives = 143/418 (34%), Gaps = 67/418 (16%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
               +    E   + ++ + R  +L   A+   G +     G+ I++ +   +  + K+ 
Sbjct: 22  HELAITTRAEDYPKWYQDVVRFGELAEPAKVVKGCMVIRPHGYAIWEKIQRDLDARFKNT 81

Query: 290 DYEEINTPQVLDQHL-WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
            +     P ++ Q    +++ H + +   +  V  A     +   + ++P +       F
Sbjct: 82  GHRNAYFPLLVPQSFIMKEAEHIEGFAPELAVVTHAGGQELE-EPYVIRPTSETIIGHFF 140

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
              + S+R+LP+++ ++ +V R E        +R   F   + H   T      E ++  
Sbjct: 141 AKWIDSHRDLPLKINQWANVMRWELR--TRMFLRTTEFLWQEGH---TAHATHEEAIEET 195

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
             ++ +Y DF                                  + +       I T   
Sbjct: 196 LQMLHVYGDF--------------------------------AEEVLAVPVTRGIKTASE 223

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAV 527
              GA      E  ++D  G+  Q GT   +  N    F+  + N   +  H   + +  
Sbjct: 224 RFAGALETYCIEAWMQD--GKALQAGTSHDLGQNFGKAFDVKFQNEAGDLEH---VWQTS 278

Query: 528 FGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTIT------SSAVEYAQEIANLLKS 577
           +G   R IG ++    ++    LP  ++PI A +  I          +E A+ +   L +
Sbjct: 279 WGVSTRLIGGLVMTHSDDDGLVLPPRVAPIHAAIIPIFRKAHEKERVMEAAERLKEQLSA 338

Query: 578 -------HHLS----IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRF 624
                          +  D R+     K  +   + +P+ I  G K+  +  + ++  
Sbjct: 339 IDIAPERARYRDFLEVVIDDRDMRPGAKFYDWERRGVPMRIELGPKDLDKGQVCMKMR 396


>gi|47222174|emb|CAG11600.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 483

 Score =  144 bits (364), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 68/440 (15%), Positives = 139/440 (31%), Gaps = 34/440 (7%)

Query: 196 KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDL 255
                 K   +      +      +      +         FL        ++L ++  L
Sbjct: 27  HSTWAEKATVSASTNSRHMKPTLLVSRLYQPSNLRDVGQDSFLHGEMTCKSQRLMQQAGL 86

Query: 256 FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSY 314
             I     G  ++     +  + LI  + +++++   ++++ P +    LW+ S  WD  
Sbjct: 87  --IHPSNPGCYYYLPATVRSVEKLIRVIDQEMQEIGGQKLDMPSLCSAELWKASERWDLM 144

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL-KSYRELPVRLAEFGSVYRNEP 373
              +  +K      +    + L P +      +  H    SY++LP+ L +    +R+EP
Sbjct: 145 GKELLRLKD-----RHGGDYCLAPTHEEAVTTLVAHQTSLSYKQLPLLLYQITRKFRDEP 199

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDFGFEKIMVKLSTRPE 432
                GL+R R F   D + F   E+   +  + +      ++   G   + V+  T   
Sbjct: 200 KPRF-GLLRGREFYMKDMYSFDVSEEAAYQTYESVCQAYTRLFARLGLHCVQVQADTGNI 258

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
               S      A+     +L     S    I T                  +     + +
Sbjct: 259 GGKLSHEFQLPADIGEDRLLLCGNCSFAANIETVSSDRTDC-------PQCRTGTLVESK 311

Query: 493 CGTIQVDFNLPSRFN-AFYVNSHSEKCHPVMIHRAVFG-SIERFIGIMIENF----KGNL 546
              +   F L  +++  F     + +          FG  + R +   IE          
Sbjct: 312 GIEVGHTFYLGKKYSSVFNATFSNAQNKLAEAEMGCFGLGVTRILAAAIEVMSTEEGIRW 371

Query: 547 PLWLSPIQAIVTT-----ITSSAVEYAQEIANLL-----KSHHLSIETDFRNETINYKIR 596
           P  L+P Q  V           A   A+E+   L     +     +  D    TI  +++
Sbjct: 372 PGLLAPYQVCVVPPKKGSKVDKATIIAEELVQTLTVTLPRLRGEVVLDDRTQMTIGRRLK 431

Query: 597 EHSIKKIPIIIICGDKEASE 616
           + S    P +++ G     E
Sbjct: 432 DASKLGYPYVVVVGQGALEE 451


>gi|153001389|ref|YP_001367070.1| prolyl-tRNA synthetase [Shewanella baltica OS185]
 gi|166980156|sp|A6WQB8|SYP_SHEB8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|151366007|gb|ABS09007.1| prolyl-tRNA synthetase [Shewanella baltica OS185]
          Length = 571

 Score =  144 bits (364), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 45/245 (18%), Positives = 90/245 (36%), Gaps = 11/245 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  L+        +E   H+ + R   +     + SG+  +   G ++ + + + +R +
Sbjct: 4   SKYLLSTQKETPANAEVISHQLMLRAGMIR---RNASGLYSYLPTGLRVLRKVEAIVREE 60

Query: 287 IK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      EI  P V    LW ++G W+ +   +   K      +  R F L P +     
Sbjct: 61  MNKAGAIEILMPMVQPADLWVETGRWEKFGPELLRFKD-----RHNRDFVLGPTHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +    + SY++LP+ L +  + +R+E      G+MR R F   DA+ F    + M    
Sbjct: 116 DLIRKEVSSYKQLPLNLYQIQTKFRDEVRPRF-GMMRSREFLMKDAYSFHLDVDTMNETY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
             ++N   +I    G     V   T       S      A++    +  +  +     I 
Sbjct: 175 EAMYNAYSNILTRMGLAFRPVLADTGSIGGSMSHEFHVLAQSGEDLIAYSTGSDYAANIE 234

Query: 465 TGVLL 469
                
Sbjct: 235 KAESP 239



 Score = 83.3 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 25/166 (15%), Positives = 56/166 (33%), Gaps = 9/166 (5%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           A+ R  + G I Q+  N     NA  ++ +  K   +++     G        + +NF  
Sbjct: 403 AMARGIEVGHIFQLGTNYSKSMNATVLDENG-KSQVLLMGCYGVGVSRIVAAAIEQNFDD 461

Query: 545 NLPLWL---SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
              +W    +P    +  +    +    + A+++   L    + +  D R E       +
Sbjct: 462 RGIIWPEAIAPFSVGILPMNMHKSHRVTDIAEQLYKDLNEAGIDVLLDDRKERPGVMFAD 521

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             +  IP  ++ GD+         +   +   Q +     +  L  
Sbjct: 522 MELIGIPHTVVIGDRNIDAGVFEYKNRRTGEKQDIPFDQLLDFLKN 567


>gi|126659940|ref|ZP_01731064.1| prolyl-tRNA synthetase [Cyanothece sp. CCY0110]
 gi|126618804|gb|EAZ89549.1| prolyl-tRNA synthetase [Cyanothece sp. CCY0110]
          Length = 598

 Score =  144 bits (364), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 55/241 (22%), Positives = 88/241 (36%), Gaps = 8/241 (3%)

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK 288
                      E+E   H+ L R   +  I   GSG+  +    W++ Q +   +R ++ 
Sbjct: 1   MLFVTLREDPAEAEIPSHKLLLRAGYIRRI---GSGIYAYLPLMWRVLQKVSQIVREEMN 57

Query: 289 D-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
               +E   PQ+    LW++SG W++Y      +    D  +  R   L P +      V
Sbjct: 58  AAGAQECLLPQLQPSELWKESGRWETYTKAEGIMFSLID--RQERELGLGPTHEEVITTV 115

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
               ++SYR+LPV L +  + +R+E      GLMR R F   DA+ F   E    +    
Sbjct: 116 AKDMIRSYRQLPVNLYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSFNENEASLQKSYDA 174

Query: 408 H-NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
                 +I    G     V+  +       S      AE     VL T        +   
Sbjct: 175 MDQAYRNIISRCGLAYRAVEADSGAIGGSASQEFMILAEAGEDEVLYTEDGKYAANVEKA 234

Query: 467 V 467
           V
Sbjct: 235 V 235



 Score = 87.9 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 63/163 (38%), Gaps = 9/163 (5%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           A  R  + G I Q+         A + + + E+  P+++     G        + +++  
Sbjct: 427 ASARGIEVGHIFQLGTKYSEAMGATFTDENGEEK-PIVMGCYGVGVSRLAQAAVEQSYDK 485

Query: 545 NLPLWL---SPIQAIVTT---ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           +  +W    +P   I+        + +E A+ + N L    +    D R+E    K ++ 
Sbjct: 486 DGIIWPVAIAPYHVIIIVPNIKDKNQIEVAENLYNELNKIGIETMLDDRDERAGVKFKDA 545

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            +  IP  ++ G +      + +    S  +Q++ + + +  L
Sbjct: 546 DLIGIPYRVVTG-RSLKAGKVEVVTRKSKESQEIEVTNLVETL 587


>gi|217972680|ref|YP_002357431.1| prolyl-tRNA synthetase [Shewanella baltica OS223]
 gi|254782915|sp|B8EDD0|SYP_SHEB2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|217497815|gb|ACK46008.1| prolyl-tRNA synthetase [Shewanella baltica OS223]
          Length = 571

 Score =  144 bits (364), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 45/245 (18%), Positives = 90/245 (36%), Gaps = 11/245 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  L+        +E   H+ + R   +     + SG+  +   G ++ + + + +R +
Sbjct: 4   SKYLLSTQKETPANAEVISHQLMLRAGMIR---RNASGLYSYLPTGLRVLRKVEAIVREE 60

Query: 287 IK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      EI  P V    LW ++G W+ +   +   K      +  R F L P +     
Sbjct: 61  MNKAGAIEILMPMVQPADLWVETGRWEKFGPELLRFKD-----RHNRDFVLGPTHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +    + SY++LP+ L +  + +R+E      G+MR R F   DA+ F    + M    
Sbjct: 116 DLIRKEVSSYKQLPLNLYQIQTKFRDEVRPRF-GMMRSREFLMKDAYSFHLDVDTMNETY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
             ++N   +I    G     V   T       S      A++    +  +  +     I 
Sbjct: 175 EAMYNAYSNILTRMGLAFRPVLADTGSIGGSMSHEFHVLAQSGEDLIAYSTGSDYAANIE 234

Query: 465 TGVLL 469
                
Sbjct: 235 KAESP 239



 Score = 83.3 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 25/166 (15%), Positives = 56/166 (33%), Gaps = 9/166 (5%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           A+ R  + G I Q+  N     NA  ++ +  K   +++     G        + +NF  
Sbjct: 403 AMARGIEVGHIFQLGTNYSKSMNATVLDENG-KSQVLLMGCYGVGVSRIVAAAIEQNFDD 461

Query: 545 NLPLWL---SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
              +W    +P    +  +    +    + A+++   L    + +  D R E       +
Sbjct: 462 RGIIWPEAIAPFSVGILPMNMHKSHRVTDIAEQLYKDLNEAGIDVLLDDRKERPGVMFAD 521

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             +  IP  ++ GD+         +   +   Q +     +  L  
Sbjct: 522 MELIGIPHTVVIGDRNIDAGVFEYKNRRTGEKQDIPFDQLLDFLKN 567


>gi|225076521|ref|ZP_03719720.1| hypothetical protein NEIFLAOT_01569 [Neisseria flavescens
           NRL30031/H210]
 gi|224952200|gb|EEG33409.1| hypothetical protein NEIFLAOT_01569 [Neisseria flavescens
           NRL30031/H210]
          Length = 570

 Score =  144 bits (364), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 48/223 (21%), Positives = 86/223 (38%), Gaps = 11/223 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       E+    H+ + R      I  + SG+  W   G ++ + + + +R 
Sbjct: 3   ASQFFISTLKEAPAEAALASHKLMIRAG---LIKANASGLYTWMPMGLRVLRKVENIVRE 59

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E+  P V    LWQ+SG W+ Y   +  +K   D     R F + P      
Sbjct: 60  EMARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHD-----RDFCMGPTCEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP       + +R+E      G+MR R F   DA+ F          
Sbjct: 115 ADIVRKEVNSYKQLPKNFYHIQTKFRDEVRPRF-GVMRAREFVMKDAYSFHADYASLQTT 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
            + +++    I+   G E   V   T      GS      AE+
Sbjct: 174 YQDMYDAYCRIFARLGLEFRPVAADTGSIGGTGSHEFQVLAES 216



 Score = 84.4 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 62/170 (36%), Gaps = 12/170 (7%)

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFN---AFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMI 539
            D  GR      I+V      R     A  V+         ++    +G  I R +   I
Sbjct: 395 PDEQGRLKLARGIEVGHVFQLRNKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAI 454

Query: 540 E-NFKGNLPLW---LSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           E N      +W   ++P + ++  +    + +  E A +I   L +    +  D R+E  
Sbjct: 455 EQNNDEKGIVWTKAMAPFEVVIVPMNYKKSEAVREAADKIYAELLAAGADVLLDDRDERA 514

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
              + +  +  IP  I+ GD+   E ++          Q V++ + +  +
Sbjct: 515 GVLLNDSELLGIPHRIVIGDRALKEGNVEYAERRDNQAQAVAISEVVAKV 564


>gi|316984142|gb|EFV63120.1| prolyl-tRNA synthetase [Neisseria meningitidis H44/76]
          Length = 599

 Score =  144 bits (364), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 47/223 (21%), Positives = 85/223 (38%), Gaps = 11/223 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       E+    H+ + R      I  + SG+  W   G ++ + + + +R 
Sbjct: 32  ASQFFISTLKEAPAEAALASHKLMIRAG---LIKANASGLYTWMPMGLRVLRKVENVVRE 88

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E+  P V    LWQ+SG W+ Y   +  +K   D     R F + P      
Sbjct: 89  EMARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHD-----RDFCMGPTCEEVI 143

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP       + +R+E      G+MR R F   DA+ F          
Sbjct: 144 ADIVRKEINSYKQLPKNFYHIQTKFRDEVRPRF-GVMRAREFVMKDAYSFHADYASLQTT 202

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
            + +++    I+   G     V   T      GS      AE+
Sbjct: 203 YQDMYDAYCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAES 245



 Score = 85.2 bits (209), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 63/171 (36%), Gaps = 12/171 (7%)

Query: 484 KDAIGRDWQCGTIQVDFNLPSR---FNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMI 539
            D  GR      I+V      R     A  V+         ++    +G  I R +   I
Sbjct: 424 PDGQGRLKLARGIEVGHVFQLRDKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAI 483

Query: 540 E-NFKGNLPLW---LSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           E N      +W   ++P + ++  +    + +  E A +I   L +    +  D R+E  
Sbjct: 484 EQNNDEKGIIWTKAMAPFEVVIVPMNYKKSDTVREAADKIYAELLAAGADVLLDDRDERA 543

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
              + +  +  IP  I+ GD+   E ++          Q V++ + +  +T
Sbjct: 544 GVLLNDSELLGIPHRIVIGDRALKEGNVEYAERRDNEAQAVAIGEIVARVT 594


>gi|239826651|ref|YP_002949275.1| prolyl-tRNA synthetase [Geobacillus sp. WCH70]
 gi|259511599|sp|C5D9C3|SYP_GEOSW RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|239806944|gb|ACS24009.1| prolyl-tRNA synthetase [Geobacillus sp. WCH70]
          Length = 567

 Score =  144 bits (364), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 55/244 (22%), Positives = 96/244 (39%), Gaps = 27/244 (11%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E + H+ L R      I +  SGV  +   G ++ Q + + +R ++      E+  P 
Sbjct: 17  DAEVKSHQLLLRAG---FIRQSASGVYTFLPLGQRVLQKVEAIIREEMNRAGAIELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQQSG W SY   +  +K      +  R FAL P +     A+    +K+Y+ L
Sbjct: 74  LQPAELWQQSGRWYSYGPELMRLKD-----RHERDFALGPTHEEIITALVRDEVKTYKRL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKD 417
           P+ L +    +R+E      GL+R R F   DA+ F T  E +     K++    +I++ 
Sbjct: 129 PLTLYQIQVKFRDEKRPRF-GLLRGREFIMKDAYSFHTSQESLDETYNKMYEAYSNIFRR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
            G     V   +       +             VL  I   +       +   + + Y  
Sbjct: 188 CGLNFRAVIADSGAIGGKDTHEF---------MVLSEIGEDT-------IAYSDASDYAA 231

Query: 478 KFEY 481
             E 
Sbjct: 232 NIEM 235



 Score = 77.1 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 60/163 (36%), Gaps = 11/163 (6%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G +  +        NA Y++ +      +M    +   + R +  + E F     
Sbjct: 404 RGIEVGHVFKLGTRYSKAMNATYLDENGRSQTMIMGCYGI--GVSRLVAAIAEQFADENG 461

Query: 546 --LPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              P  ++P    + ++        + A E    L      +  D R E    K  +  +
Sbjct: 462 LVWPASVAPFHVHLISVNAKNEEQRQLADEWYEKLGQAGFEVLYDDRPERAGVKFADSDL 521

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             IPI +  G + A+E  + I+   +  + +VS+ + I  + +
Sbjct: 522 IGIPIRVTVGKR-ANEGIVEIKVRQTGESMEVSVDELIDTIRR 563


>gi|114046916|ref|YP_737466.1| prolyl-tRNA synthetase [Shewanella sp. MR-7]
 gi|122944801|sp|Q0HWU6|SYP_SHESR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|113888358|gb|ABI42409.1| prolyl-tRNA synthetase [Shewanella sp. MR-7]
          Length = 570

 Score =  144 bits (364), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 45/245 (18%), Positives = 89/245 (36%), Gaps = 11/245 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  L+        +E   H+ + R   +     + SG+  +   G ++ + + + +R +
Sbjct: 4   SKYLLSTQKETPANAEVISHQLMLRAGMIR---RNASGLYSYLPTGLRVLRKVEAIVREE 60

Query: 287 IK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      EI  P V    LW ++G WD +   +   K      +  R F L P +     
Sbjct: 61  MNKAGAIEILMPMVQPADLWVETGRWDKFGPELLRFKD-----RHNRDFVLGPTHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +    + SY++LP+ L +  + +R+E      G+MR R F   DA+ F    + M    
Sbjct: 116 DLIRKEVSSYKQLPLNLYQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHLDVDTMNETY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
             ++    +I    G     V   T       S      A++    +  +  +     I 
Sbjct: 175 EAMYQAYSNILSRMGLAFRPVLADTGSIGGSMSHEFHVLAQSGEDLIAYSTGSDYAANIE 234

Query: 465 TGVLL 469
                
Sbjct: 235 KAESP 239



 Score = 84.4 bits (207), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 59/168 (35%), Gaps = 13/168 (7%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE--- 540
           A+ R  + G I Q+  N     NA  ++ + +     ++    +G  + R +   IE   
Sbjct: 403 AMARGIEVGHIFQLGTNYSKSMNATVLDENGKSQ---VLLMGCYGVGVSRIVAAAIEQNF 459

Query: 541 -NFKGNLPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            +     P  ++P    +  +    +    + A+++   L +  + +  D R E      
Sbjct: 460 DDRGIVWPEAIAPFSVGILPMNMHKSHRVTDIAEQLYKDLSAAGIDVLLDDRKERPGVMF 519

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +  +  IP  ++ GD+         +   +   Q V     +  L  
Sbjct: 520 ADMELIGIPHTVVIGDRNIDAGVFEYKNRRTGEKQDVPFDQIVDFLKN 567


>gi|304409899|ref|ZP_07391518.1| prolyl-tRNA synthetase [Shewanella baltica OS183]
 gi|307302394|ref|ZP_07582152.1| prolyl-tRNA synthetase [Shewanella baltica BA175]
 gi|304351308|gb|EFM15707.1| prolyl-tRNA synthetase [Shewanella baltica OS183]
 gi|306914432|gb|EFN44853.1| prolyl-tRNA synthetase [Shewanella baltica BA175]
          Length = 571

 Score =  144 bits (364), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 45/245 (18%), Positives = 90/245 (36%), Gaps = 11/245 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  L+        +E   H+ + R   +     + SG+  +   G ++ + + + +R +
Sbjct: 4   SKYLLSTQKETPANAEVISHQLMLRAGMIR---RNASGLYSYLPTGLRVLRKVEAIVREE 60

Query: 287 IK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      EI  P V    LW ++G W+ +   +   K      +  R F L P +     
Sbjct: 61  MNKAGAIEILMPMVQPADLWVETGRWEKFGPELLRFKD-----RHNRDFVLGPTHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +    + SY++LP+ L +  + +R+E      G+MR R F   DA+ F    + M    
Sbjct: 116 DLIRKEVSSYKQLPLNLYQIQTKFRDEVRPRF-GMMRSREFLMKDAYSFHLDVDTMNETY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
             ++N   +I    G     V   T       S      A++    +  +  +     I 
Sbjct: 175 EAMYNAYSNILTRMGLAFRPVLADTGSIGGSMSHEFHVLAQSGEDLIAYSTGSDYAANIE 234

Query: 465 TGVLL 469
                
Sbjct: 235 KAESP 239



 Score = 83.3 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 25/166 (15%), Positives = 56/166 (33%), Gaps = 9/166 (5%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           A+ R  + G I Q+  N     NA  ++ +  K   +++     G        + +NF  
Sbjct: 403 AMARGIEVGHIFQLGTNYSKSMNATVLDENG-KSQVLLMGCYGVGVSRIVAAAIEQNFDD 461

Query: 545 NLPLWL---SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
              +W    +P    +  +    +    + A+++   L    + +  D R E       +
Sbjct: 462 RGIIWPEAIAPFSVGILPMNMHKSHRVTDIAEQLYKDLNEAGIDVLLDDRKERPGVMFAD 521

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             +  IP  ++ GD+         +   +   Q +     +  L  
Sbjct: 522 MELIGIPHTVVIGDRNIDAGVFEYKNRRTGEKQDIPFDQLLDFLKN 567


>gi|296160514|ref|ZP_06843330.1| prolyl-tRNA synthetase [Burkholderia sp. Ch1-1]
 gi|295889263|gb|EFG69065.1| prolyl-tRNA synthetase [Burkholderia sp. Ch1-1]
          Length = 578

 Score =  144 bits (364), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 55/287 (19%), Positives = 107/287 (37%), Gaps = 13/287 (4%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ + R   +  +A    G+  +   G +  + + + +R ++      E+  P 
Sbjct: 17  DAEIVSHKLMVRAGMIRRVA---GGIYNYLPIGLRSIRKVEAIVREEMNRAGAIELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    LWQ+SG W+ Y   +   K    +      F + P +      +  + +KSYR+L
Sbjct: 74  VQPAELWQESGRWEKYGPELLRFKDRKQS-----DFVIGPTHEEVVTDIARNQIKSYRQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKD 417
           PV   +  + +R+E      G+MR R F   DA+ F    + +     K+++  + I+  
Sbjct: 129 PVNFYQVQTKFRDEIRPRF-GVMRGREFIMKDAYSFDKDMDGLRESYRKMYDAYVRIFTR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
            G +   V          GS      AE     +     +     +     L   A    
Sbjct: 188 LGLDFRAVAADNGSIGGSGSHEFHVIAETGEDAIAYCPTSDFAANVEAAEALPLHAERAA 247

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLP--SRFNAFYVNSHSEKCHPVM 522
             E + K A     +C  +    N+P      +  + + +E   P +
Sbjct: 248 PAEEMKKTATPGKAKCEAVAELLNIPLERTIKSIILATENEGAEPTI 294



 Score = 80.6 bits (197), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 58/158 (36%), Gaps = 11/158 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNL 546
           R  + G + Q+        NA  ++   +   P+ +     G   R +G  IE NF    
Sbjct: 409 RGIEVGHVFQLGTKYSEAMNATCLDETGKP-RPMEMGCYGIGVT-RILGAAIEQNFDDRG 466

Query: 547 PLWL---SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
            +W    +P + ++  +    + +  E A ++   L    + +  D R E       +  
Sbjct: 467 IIWPESIAPFEVVLCPMGYDRSEAVREAADKLYATLVEAGIDVILDDRGERPGVMFADWE 526

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
           +  +P  ++ GD+   +  +  +         + + DA
Sbjct: 527 LIGVPHRLVIGDRGLKDGKLEYQGRRDAEATLLPVEDA 564


>gi|91785266|ref|YP_560472.1| prolyl-tRNA synthetase [Burkholderia xenovorans LB400]
 gi|123358448|sp|Q13U19|SYP_BURXL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|91689220|gb|ABE32420.1| Prolyl-tRNA synthetase [Burkholderia xenovorans LB400]
          Length = 578

 Score =  144 bits (364), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 55/287 (19%), Positives = 107/287 (37%), Gaps = 13/287 (4%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ + R   +  +A    G+  +   G +  + + + +R ++      E+  P 
Sbjct: 17  DAEIVSHKLMVRAGMIRRVA---GGIYNYLPIGLRSIRKVEAIVREEMNRAGAIELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    LWQ+SG W+ Y   +   K    +      F + P +      +  + +KSYR+L
Sbjct: 74  VQPAELWQESGRWEKYGPELLRFKDRKQS-----DFVIGPTHEEVVTDIARNQIKSYRQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKD 417
           PV   +  + +R+E      G+MR R F   DA+ F    + +     K+++  + I+  
Sbjct: 129 PVNFYQVQTKFRDEIRPRF-GVMRGREFIMKDAYSFDKDMDGLRESYRKMYDAYVRIFTR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
            G +   V          GS      AE     +     +     +     L   A    
Sbjct: 188 LGLDFRAVAADNGSIGGSGSHEFHVIAETGEDAIAYCPTSDFAANVEAAEALPLHAERAA 247

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLP--SRFNAFYVNSHSEKCHPVM 522
             E + K A     +C  +    N+P      +  + + +E   P +
Sbjct: 248 PAEEMKKTATPGKAKCEAVAELLNIPLERTIKSIILATENEGAEPTI 294



 Score = 81.0 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 58/158 (36%), Gaps = 11/158 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNL 546
           R  + G + Q+        NA  ++   +   P+ +     G   R +G  IE NF    
Sbjct: 409 RGIEVGHVFQLGTKYSEAMNATCLDETGKP-RPMEMGCYGIGVT-RILGAAIEQNFDDRG 466

Query: 547 PLWL---SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
            +W    +P + ++  +    + +  E A ++   L    + +  D R E       +  
Sbjct: 467 IIWPESIAPFEVVLCPMGYDRSEAVREAADKLYATLLEAGIDVILDDRGERPGVMFADWE 526

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
           +  +P  ++ GD+   +  +  +         + + DA
Sbjct: 527 LIGVPHRLVIGDRGLKDGKLEYQGRRDAEATLLPVEDA 564


>gi|224534632|ref|ZP_03675206.1| proline--tRNA ligase [Borrelia spielmanii A14S]
 gi|224514101|gb|EEF84421.1| proline--tRNA ligase [Borrelia spielmanii A14S]
          Length = 488

 Score =  144 bits (364), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 74/431 (17%), Positives = 156/431 (36%), Gaps = 61/431 (14%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
           ++ ++   E+   + +  + ++  L   +     ++     G+ I+  + S + +K K+ 
Sbjct: 1   MSDFIASKEDDYSKWYLDIVQKAKLADYSPVKGCMVI-MPYGYSIWSKIHSILDKKFKET 59

Query: 290 DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
            +E    P ++     + +  H D +      +K A           L+P +      ++
Sbjct: 60  GHENAYFPMLIPYGFLEKEKDHIDGFSPEFAIIKDAGGESL-AEPLVLRPTSETIIWNMY 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
           +  +KSYR+LP+++ ++ +V R E        +R   F   + H   T      E L+  
Sbjct: 119 SKWIKSYRDLPLKINQWANVIRWEKR--TRPFLRTTEFLWQEGH---TAHATEEEALEET 173

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
            LI+ +YK F                          E+ +   +   K S +++      
Sbjct: 174 LLILDVYKRF-------------------------IEDYLAIPVFCGKKSEKEKF----- 203

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAV 527
              GA      E +++D   +  Q  T      N    F+  + +   +  +   +  + 
Sbjct: 204 --AGAVSTYSVEALMQD--KKALQAATSHYLGLNFAKAFDVKFQDKDGKMRY---VFASS 256

Query: 528 FGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTT-------ITSSAVEYAQEIANLLK 576
           +G   R IG +I    +     LP  ++PI+ IV         I    ++Y+  +   LK
Sbjct: 257 WGVSTRLIGALIMVHSDERGLILPPRIAPIEIIVIPIFKKEDKINKKILDYSDCVVQALK 316

Query: 577 SHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT--TQKVS 633
                +E D     +  ++      K IPI +  G  +    S+ I R         ++S
Sbjct: 317 KAEFRVEIDKDIRSSPGFRFSSAEFKGIPIRLEIGINDILLNSVTIIRRDKDKKFKYQIS 376

Query: 634 LLDAIPILTKE 644
           L   +  +  E
Sbjct: 377 LDSLVSKVKAE 387


>gi|294784787|ref|ZP_06750075.1| proline--tRNA ligase [Fusobacterium sp. 3_1_27]
 gi|294486501|gb|EFG33863.1| proline--tRNA ligase [Fusobacterium sp. 3_1_27]
          Length = 567

 Score =  144 bits (364), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 57/246 (23%), Positives = 98/246 (39%), Gaps = 11/246 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  +       +E+E   H+ + R   +  +A   SG+  +   G++  + + + +R 
Sbjct: 3   FSKAYIKTLKETPKEAEIASHKLMLRAGMIKKLA---SGIYAYLPLGYRTIKKIENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LWQ+SG WD     M  +K      +  R F L P      
Sbjct: 60  EMDRAGALELLMPVVQPAELWQESGRWDVMGPEMLRLKD-----RHERDFVLSPTQEEMI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
            A+    + SY+ LP+ L    + +R+E      GLMR R FT  DA+ F T  E +  E
Sbjct: 115 TAIVRSDISSYKSLPINLYHIQTKFRDERRPRF-GLMRGREFTMKDAYSFHTSQESLDEE 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            L + N    I+   G +   V   +      GS      AE+    ++ +  +     I
Sbjct: 174 FLNMRNAYSRIFTRCGLKFRPVDADSGNIGGSGSQEFQVLAESGEDEIIYSDGSEYAANI 233

Query: 464 NTGVLL 469
              V  
Sbjct: 234 EKAVSE 239



 Score = 82.1 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 29/162 (17%), Positives = 63/162 (38%), Gaps = 9/162 (5%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  +CG I  +        NA Y++ + +  + +++     G        + +N   N  
Sbjct: 403 RGIECGQIFKLGDKYSKVMNATYLDENGKTQY-MLMGCYGIGVTRTMAAAIEQNNDENGI 461

Query: 548 LWL---SPIQAIVTT---ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W    +P    V          V  A++I N L+   +    D R+E   +K ++  + 
Sbjct: 462 IWPVSIAPYTVDVIPANIKNEVQVSLAEKIYNELEEEKIDAMLDDRDEKPGFKFKDADLI 521

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             P  I+ G + A E  + ++   +  T ++   + I  + +
Sbjct: 522 GFPFKIVVGKR-ADEGIVELKIRRTGETLELPQNEIIAKIKE 562


>gi|241760072|ref|ZP_04758170.1| proline--tRNA ligase [Neisseria flavescens SK114]
 gi|241319526|gb|EER55956.1| proline--tRNA ligase [Neisseria flavescens SK114]
          Length = 595

 Score =  144 bits (364), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 45/225 (20%), Positives = 84/225 (37%), Gaps = 12/225 (5%)

Query: 228 QQELTQYLYFLEESEKRDHRKLAREMDLFH----IAEDGSGVIFWHRKGWKIFQTLISYM 283
           +  +    +F+   ++           L      I  + SG+  W   G ++ + + + +
Sbjct: 23  KYAMKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENIV 82

Query: 284 RRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
           R ++ +    E+  P V    LWQ+SG W+ Y   +  +K   D     R F + P    
Sbjct: 83  REEMARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHD-----RDFCMGPTCEE 137

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN 402
               +    + SY++LP       + +R+E      G+MR R F   DA+ F        
Sbjct: 138 VIADIVRKEVNSYKQLPKNFYHIQTKFRDEVRPRF-GVMRAREFVMKDAYSFHADYASLQ 196

Query: 403 ECLK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
              + +++    I+   G +   V   T      GS      AE+
Sbjct: 197 TTYQNMYDAYCRIFTRLGLKFRPVAADTGSIGGTGSHEFQVLAES 241



 Score = 84.1 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 62/170 (36%), Gaps = 12/170 (7%)

Query: 484 KDAIGRDWQCGTIQVDFNLPSR---FNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMI 539
            D  GR      I+V      R     A  V+         ++    +G  I R +   I
Sbjct: 420 PDEQGRLKLARGIEVGHVFQLRDKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAI 479

Query: 540 E-NFKGNLPLW---LSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           E N      +W   ++P + ++  +    + +  E A +I   L +    +  D R+E  
Sbjct: 480 EQNNDEKGIVWTKAMAPFEVVIVPMNYKKSEAVREAADKIYAELLAAGADVLLDDRDERA 539

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
              + +  +  IP  I+ GD+   E ++          Q V++ + +  +
Sbjct: 540 GVLLNDSELLGIPHRIVIGDRALKEGNVEYAERRDNQAQAVAVSEVVAKV 589


>gi|212703017|ref|ZP_03311145.1| hypothetical protein DESPIG_01055 [Desulfovibrio piger ATCC 29098]
 gi|212673605|gb|EEB34088.1| hypothetical protein DESPIG_01055 [Desulfovibrio piger ATCC 29098]
          Length = 576

 Score =  144 bits (364), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 52/221 (23%), Positives = 92/221 (41%), Gaps = 11/221 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +   +        E+E   H+ L R   +  +    SGV  +   G K  + +   +R 
Sbjct: 3   FSSTYIPTLKESPSEAEVVSHKLLLRAGMVRKL---TSGVYIYLPLGLKALENVQRVVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++    + E+  P V+   LW+++G W+ Y   +   K  +D     R + L P +    
Sbjct: 60  EMDAAGFSELLMPMVIPGDLWKETGRWEYYGKELLRFKDRND-----RDYCLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    ++SYR+LPVRL +  + +R+E      GLMR R F   DA+ F + +   +E 
Sbjct: 115 TDLVRGEVRSYRQLPVRLYQIQTKFRDEIRPRF-GLMRGREFVMKDAYSFDSSDAGADES 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
            K +++    I+K  G     V+  T       S      A
Sbjct: 174 YKLMYDAYCRIFKRLGLRFRAVEADTGSIGGNFSHEFMVLA 214



 Score = 71.7 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 59/167 (35%), Gaps = 14/167 (8%)

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           G   E      +G  ++ GT   D       +       + K + +++     G I R +
Sbjct: 395 GGAIELPKGIEVGHIFKLGTKYSDAMHAVYLD------ENGKENVMIMGCYGIG-ISRVV 447

Query: 536 GIMIENFKGN----LPLWLSPIQAIVT---TITSSAVEYAQEIANLLKSHHLSIETDFRN 588
              IE          P  ++P++ I+             A+EI  +L    +++  D R 
Sbjct: 448 ASAIEQNHDEHGIIFPPTVAPVECILLNLDPGKEEVRAKAEEIYAMLCKAGVTVLLDDRE 507

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
           E    K ++  +   P+ ++ G K  S   +  +   +    ++ + 
Sbjct: 508 ERPGVKFKDADLIGAPMQLVLGGKGLSRGVLECKDRRTGEKGELPVD 554


>gi|269213497|ref|ZP_06158007.1| proline--tRNA ligase [Neisseria cinerea ATCC 14685]
 gi|269146261|gb|EEZ72679.1| proline--tRNA ligase [Neisseria cinerea ATCC 14685]
          Length = 594

 Score =  144 bits (364), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 48/223 (21%), Positives = 85/223 (38%), Gaps = 11/223 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       E+    H+ + R      I  + SG+  W   G ++ + + + +R 
Sbjct: 27  ASQFFISTLKEAPAEAALASHKLMIRAG---LIKANASGLYTWMPMGLRVLRKVENVVRE 83

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E+  P V    LWQ+SG W+ Y   +  +K   D     R F + P      
Sbjct: 84  EMARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHD-----RDFCMGPTCEEVI 138

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP       + +R+E      G+MR R F   DA+ F          
Sbjct: 139 ADIVRKEINSYKQLPKNFYHIQTKFRDEVRPRF-GVMRAREFVMKDAYSFHADYASLQTT 197

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
              +++    I+   G E   V   T      GS      AE+
Sbjct: 198 YDAMYDAYCRIFTRLGLEFRPVAADTGSIGGTGSHEFQVLAES 240



 Score = 86.4 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 32/172 (18%), Positives = 62/172 (36%), Gaps = 12/172 (6%)

Query: 484 KDAIGRDWQCGTIQVDFNLPSR---FNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMI 539
            D  GR      I+V      R     A  V+         ++    +G  I R +   I
Sbjct: 419 PDGQGRLKLARGIEVGHVFQLRDKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAI 478

Query: 540 E-NFKGNLPLW---LSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           E N      +W   ++P + ++  +    + +  E A +I   L +    +  D R+E  
Sbjct: 479 EQNNDEKGIIWTKAMAPFEVVIVPMNYKKSDAVREAADKIYAELLAAGADVLLDDRDERA 538

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              + +  +  IP  I+ GD+   E ++          Q V + + +  +T 
Sbjct: 539 GVLLNDSELLGIPHRIVIGDRALKEGNVEYAERRDNEAQSVPIGEIVARVTD 590


>gi|113969687|ref|YP_733480.1| prolyl-tRNA synthetase [Shewanella sp. MR-4]
 gi|123130574|sp|Q0HKJ4|SYP_SHESM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|113884371|gb|ABI38423.1| prolyl-tRNA synthetase [Shewanella sp. MR-4]
          Length = 570

 Score =  144 bits (364), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 45/245 (18%), Positives = 89/245 (36%), Gaps = 11/245 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  L+        +E   H+ + R   +     + SG+  +   G ++ + + + +R +
Sbjct: 4   SKYLLSTQKETPANAEVISHQLMLRAGMIR---RNASGLYSYLPTGLRVLRKVEAIVREE 60

Query: 287 IK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      EI  P V    LW ++G WD +   +   K      +  R F L P +     
Sbjct: 61  MNKAGAIEILMPMVQPADLWVETGRWDKFGPELLRFKD-----RHNRDFVLGPTHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +    + SY++LP+ L +  + +R+E      G+MR R F   DA+ F    + M    
Sbjct: 116 DLIRKEVSSYKQLPLNLYQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHLDVDTMNETY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
             ++    +I    G     V   T       S      A++    +  +  +     I 
Sbjct: 175 EAMYQAYSNILSRMGLAFRPVLADTGSIGGSMSHEFHVLAQSGEDLIAYSTGSDYAANIE 234

Query: 465 TGVLL 469
                
Sbjct: 235 KAESP 239



 Score = 84.1 bits (206), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 59/168 (35%), Gaps = 13/168 (7%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE--- 540
           A+ R  + G I Q+  N     NA  ++ + +     ++    +G  + R +   IE   
Sbjct: 403 AMARGIEVGHIFQLGTNYSKSMNATVLDENGKSQ---VLLMGCYGVGVSRIVAAAIEQNF 459

Query: 541 -NFKGNLPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            +     P  ++P    +  +    +    + A+++   L +  + +  D R E      
Sbjct: 460 DDRGIVWPEAIAPFSVGILPMNMHKSHRVTDIAEQLYKDLSAAGIDVLLDDRKERPGVMF 519

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +  +  IP  ++ GD+         +   +   Q V     +  L  
Sbjct: 520 ADMELIGIPHTVVIGDRNIDAGVFEYKNRRTGEKQDVPFDQIVDFLKN 567


>gi|297156817|gb|ADI06529.1| prolyl-tRNA synthetase [Streptomyces bingchenggensis BCW-1]
          Length = 566

 Score =  144 bits (364), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 63/341 (18%), Positives = 125/341 (36%), Gaps = 29/341 (8%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  L        ++E   H+ L R   +   +    G+  W   G K+ + +   +R +
Sbjct: 8   SRLMLKTLREDPADAETASHKLLVRAGYVRRTSA---GIWTWLPIGKKVLENVARIVREE 64

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E+  P +L +  ++ SG W+ Y   +F +K      +    + L P +     
Sbjct: 65  MDAIGAQEVLLPALLPREPYEASGRWEEYGDLLFRIKD-----RKGADYLLGPTHEEIFT 119

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
                   SY++LPV L +  + YR+E      G++R R F   D++ F T ++   E  
Sbjct: 120 QTVKDQCTSYKDLPVILYQIQTKYRDEARPR-SGVLRGREFQMKDSYSFDTTDEGLAESY 178

Query: 406 KIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA---ENIMKGVLDTIKNSSQD 461
           ++H      I++  G +  +V   +       S+     A   E+      +    ++ +
Sbjct: 179 RLHREAYQRIFERLGLDYRIVSAISGAMGGSASEEFLAPAAAGEDTFVDCPNCDYAANTE 238

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
            +   +   EGA +GP  E    D            ++    +      V    E     
Sbjct: 239 AVTLALTPVEGAEHGPVEELDTPDT--PTIDTLAEHLNIPASATLKNLLVKVDGE----- 291

Query: 522 MIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITS 562
           +    V G  E  +G + E+        L+P +  V T   
Sbjct: 292 ITAVGVPGDREVDLGKLAEH--------LAPAEVEVVTAED 324



 Score = 88.7 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 62/163 (38%), Gaps = 10/163 (6%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           + R  + G I Q+       F    +  + +     M    +   + R +  + E     
Sbjct: 406 LDRAIEIGHIFQLGRKYADTFQLDVLGQNGKPVRVTMGSYGI--GVSRAVAALAEQTHDE 463

Query: 546 ----LPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHS 599
                P  ++P    +     +   E A E+A+ L +  + +  D R   +   K  +  
Sbjct: 464 SGLCWPREVAPADVHIVAAGKALQTELALELADKLGTAGVRVMVDDRAGVSPGVKFTDAE 523

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +  +P I++ G + A +  + ++   +   +++ + +A+  LT
Sbjct: 524 LIGVPTILVVG-RGAKDGVVELKDRRTGEREELPVDEALSRLT 565


>gi|253988145|ref|YP_003039501.1| prolyl-tRNA synthetase [Photorhabdus asymbiotica subsp. asymbiotica
           ATCC 43949]
 gi|253779595|emb|CAQ82756.1| prolyl-tRNA synthetase [Photorhabdus asymbiotica]
          Length = 574

 Score =  144 bits (364), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 68/387 (17%), Positives = 133/387 (34%), Gaps = 46/387 (11%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + +   +R 
Sbjct: 3   TSQYLLSTLKETPADAEVVSHKLMLRAGMIRKLA---SGLYNWMPTGIRVLKKVEKIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    EI+ P V    LWQ+SG W+ Y   +       D     R F L P +    
Sbjct: 60  EMNNAGAIEISMPVVQPADLWQESGRWEQYGPELLRFADRGD-----RPFVLGPTHEEVV 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + + SY++LP+ L +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLIRNEVSSYKQLPLTLFQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHTTQESLQET 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   G +   V   T       S      A +    ++ + +++    I
Sbjct: 174 YDNMYEAYSKIFTRIGLDFRAVLADTGSIGGSASHEFQVLAASGEDDIVFSTESNYAANI 233

Query: 464 NTGVLLGEGAFY-GPKFEYILKD----------------AIGRDWQCGTIQVDFNLPSRF 506
                +        P  +  L D                 I +  +   +    +   + 
Sbjct: 234 ELAEAVAPAYDRAAPAEDMYLVDTPNAKTIAELVEQFNLPIEKTVKTLIVHAAEDTGHKL 293

Query: 507 NAFYVNSHSE------KCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTI 560
            A  V    E      +  P++     F + E    I+     G  P  L P+   +  I
Sbjct: 294 IALLVRGDHELNGIKAEKLPLVASPLTFATEEEIRTIV-----GAGPGSLGPVNLPMPVI 348

Query: 561 TSSAVEYAQEIANLLKSHHLSIETDFR 587
              +         ++         D +
Sbjct: 349 IDHS-------VAVMSDFGAGANIDDK 368



 Score = 84.4 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 57/168 (33%), Gaps = 13/168 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           I R  + G I Q+         A          H  +I    +G  + R +   IE    
Sbjct: 405 IKRGIEVGHIFQLGTKYSDAMKATVQGEDG---HNQIITMGCYGIGVTRIVAAAIEQNHD 461

Query: 545 N----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           N     P  ++P Q  +  +         E A+++   L++  + +  D R E       
Sbjct: 462 NRGIIWPDAIAPFQVAILPMNMHKSYRVKEIAEKLYADLRACGIDVIFDDRKERPGVMFA 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  +  +P  I+ GD+      +  +       Q + L   +  L ++
Sbjct: 522 DMELIGVPHTIVIGDRNLDSGEVEYKYRRCDDKQMLKLDCVVDHLKQQ 569


>gi|254673039|emb|CBA07634.1| Prolyl-tRNA synthetase [Neisseria meningitidis alpha275]
          Length = 599

 Score =  144 bits (364), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 47/223 (21%), Positives = 84/223 (37%), Gaps = 11/223 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       E+    H+ + R      I  + SG+  W   G ++ + + + +R 
Sbjct: 32  ASQFFISTLKEAPAEAALASHKLMIRAG---LIKANASGLYTWMPMGLRVLRKVENVVRE 88

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E+  P V    LWQ+SG W+ Y   +  +K   D     R F + P      
Sbjct: 89  EMARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHD-----RDFCMGPTCEEVI 143

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP       + +R+E      G+MR R F   DA+ F          
Sbjct: 144 ADIVRKEINSYKQLPKNFYHIQTKFRDEVRPRF-GVMRAREFVMKDAYSFHADYASLQTT 202

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
              +++    I+   G     V   T      GS      AE+
Sbjct: 203 YDAMYDAYCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAES 245



 Score = 86.0 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 64/171 (37%), Gaps = 12/171 (7%)

Query: 484 KDAIGRDWQCGTIQVDFNLPSR---FNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMI 539
            D  GR      I+V      R     A  V+         ++    +G  I R +   I
Sbjct: 424 PDGQGRLKLARGIEVGHVFQLRDKYTKAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAI 483

Query: 540 E-NFKGNLPLW---LSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           E N      +W   ++P + ++  +    + +  E A +I   L +    +  D R+E  
Sbjct: 484 EQNNDEKGIIWTKAMAPFEVVIVPMNYKKSDTVREAADKIYAELLAAGADVLLDDRDERA 543

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
              + +  +  IP  I+ GD+   E ++      +   Q V++ + +  +T
Sbjct: 544 GVLLNDSELLGIPHRIVIGDRALKEGNVEYAERRNNEAQAVAIGEIVARVT 594


>gi|145544571|ref|XP_001457970.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124425789|emb|CAK90573.1| unnamed protein product [Paramecium tetraurelia]
          Length = 702

 Score =  144 bits (364), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 72/409 (17%), Positives = 143/409 (34%), Gaps = 56/409 (13%)

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD 301
              ++++ R+ ++     D SG        + I++ +  Y    I+ +D E    P  L 
Sbjct: 217 SEWYQQVIRKAEMIEY-YDVSGCYILRPWSYFIWEQIQRYFDDLIRTEDVENTYFPMFLS 275

Query: 302 QHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
                ++  H + ++A +  V    ++       A++P +       F   ++S+R+LP+
Sbjct: 276 AQQLNKEKEHVEGFKAEVAWVTKYGESDL-NEHLAIRPTSETIMYPAFAKWVQSHRDLPL 334

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKDFG 419
           ++ ++ ++ R E        +R R F   + H    TKE+   +   I N    +Y +  
Sbjct: 335 KVNQWTNIVRWEFKYPT-PFIRTREFLWQEGHTAHFTKEEAVKQVYTILNFYEQVYGELL 393

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
              ++  + T  EK  G D                                    +    
Sbjct: 394 AVPVIKGIKTESEKFAGGD------------------------------------FTTTV 417

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           E I+    GR  Q  T        S+   F +    +K       +  +G   R IG MI
Sbjct: 418 ETIIP-QNGRGLQGATSHHLGQNFSK--MFEIKFEDDKRQKAFAWQTSWGLTTRSIGAMI 474

Query: 540 ENFKGNLPLWLSPI----QAIVTTITSSAV------EYAQEIANLLKSHHLSIETDFRNE 589
                +  L L P     Q ++  I +  +      E  +EI  +L    L +  D R+ 
Sbjct: 475 MFHGDDKGLVLPPRVAKYQIVIIPIINKDLDEKQLNEKCEEIKQILIKQRLRVHFDNRDN 534

Query: 590 -TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
            +  +K  +   K +PI +  G  E     + + +       ++ + D 
Sbjct: 535 YSPGWKFNKWEQKGVPIRLEIGPGEFKNNEVRVVQRFDNKKYQIKIEDL 583


>gi|91793895|ref|YP_563546.1| prolyl-tRNA synthetase [Shewanella denitrificans OS217]
 gi|123060765|sp|Q12L53|SYP_SHEDO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|91715897|gb|ABE55823.1| prolyl-tRNA synthetase [Shewanella denitrificans OS217]
          Length = 571

 Score =  144 bits (364), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 44/244 (18%), Positives = 90/244 (36%), Gaps = 11/244 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  L+        +E   H+ + R   +     + SG+  W   G ++ + + + +R +
Sbjct: 4   SKYLLSTQKETPANAEVISHQLMLRAGMIR---RNASGLYSWLPSGLRVLRKVEAIVREE 60

Query: 287 IK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      EI  P V    LW ++G W+ +   +   +      +  R F L P +     
Sbjct: 61  MNKAGAIEILMPLVQPADLWIETGRWEKFGPELLRFQD-----RHNRDFVLGPTHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    + SY++LP+ L +  + +R+E      G+MR R F   DA+ F   +   +E  
Sbjct: 116 DLVRKEVSSYKQLPLSLYQIQTKFRDEVRPRF-GVMRAREFLMKDAYSFHLDQGTMDETY 174

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
           + +     +I+   G     V   T       S      A +    +  +  +     I 
Sbjct: 175 QAMFTAYNNIFTRMGLAFRPVLADTGSIGGSLSHEFHVLANSGEDLIAYSTGSDYAANIE 234

Query: 465 TGVL 468
               
Sbjct: 235 KAEA 238



 Score = 84.4 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 61/167 (36%), Gaps = 13/167 (7%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE--- 540
           A+ R  + G I Q+  N     NA  ++ + +     ++    +G  + R +   IE   
Sbjct: 403 AMARGIEVGHIFQLGTNYSKAMNATVLDENGKSQ---VMLMGCYGVGVSRIVAAAIEQNH 459

Query: 541 -NFKGNLPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            +    LP  L+P    +  +    +    + A+++   L    + +  D R E      
Sbjct: 460 DDRGIMLPEALAPFTVGILPMNMHKSHRVADIAEKLYQDLNDAGIEVLLDDRKERPGVMF 519

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +  +  +P +++ GD+         +   +   Q + L   +  L 
Sbjct: 520 ADMELIGLPHVVVIGDRNIDAGVFEYKNRRTGEKQDIPLDQIVDFLK 566


>gi|237742688|ref|ZP_04573169.1| prolyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
 gi|229430336|gb|EEO40548.1| prolyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
          Length = 567

 Score =  144 bits (364), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 57/246 (23%), Positives = 98/246 (39%), Gaps = 11/246 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  +       +E+E   H+ + R   +  +A   SG+  +   G++  + + + +R 
Sbjct: 3   FSKAYIKTLKETPKEAEIASHKLMLRAGMIKKLA---SGIYAYLPLGYRTIKKIENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LWQ+SG WD     M  +K      +  R F L P      
Sbjct: 60  EMDRAGALELLMPVVQPAELWQESGRWDVMGPEMLRLKD-----RHERDFVLSPTQEEMI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
            A+    + SY+ LP+ L    + +R+E      GLMR R FT  DA+ F T  E +  E
Sbjct: 115 TAIVRSDISSYKSLPINLYHIQTKFRDERRPRF-GLMRGREFTMKDAYSFHTSQESLDEE 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            L + N    I+   G +   V   +      GS      AE+    ++ +  +     I
Sbjct: 174 FLNMRNAYSRIFTRCGLKFRPVDADSGNIGGSGSQEFQVLAESGEDEIIYSDGSEYAANI 233

Query: 464 NTGVLL 469
              V  
Sbjct: 234 EKAVSE 239



 Score = 83.7 bits (205), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 64/162 (39%), Gaps = 9/162 (5%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  +CG I  +        NA Y++ + +  + +++     G        + +N   N  
Sbjct: 403 RGIECGQIFKLGDKYSKVMNATYLDENGKTQY-MLMGCYGIGVTRTMAAAIEQNNDENGI 461

Query: 548 LWL---SPIQAIVTT---ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W    +P    V          V  A++I N L+   +    D R+E   +K ++  + 
Sbjct: 462 IWPVSIAPYTVDVIPANIKNEVQVSLAEKIYNELEEEKIDAMLDDRDEKPGFKFKDADLI 521

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             P  I+ G + A E  + ++   +  T ++S  + I  + +
Sbjct: 522 GFPFKIVVGKR-ADEGIVELKIRRTGETLEISQNEVIAKIKE 562


>gi|194098918|ref|YP_002001983.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae NCCP11945]
 gi|291043544|ref|ZP_06569260.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
 gi|293398861|ref|ZP_06643026.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae F62]
 gi|193934208|gb|ACF30032.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae NCCP11945]
 gi|291012007|gb|EFE03996.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
 gi|291610275|gb|EFF39385.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae F62]
          Length = 599

 Score =  144 bits (364), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 46/223 (20%), Positives = 84/223 (37%), Gaps = 11/223 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       E+    H+ + R      I  + SG+  W   G ++ + + + +R 
Sbjct: 32  ASQFFISTLKEAPAEAAFASHKLMIRAG---LIKANASGLYTWMPMGLRVLRKVENVVRE 88

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E+  P V    LWQ+SG W+ Y   +  +K      +  R F + P      
Sbjct: 89  EMARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKD-----RHERDFCMGPTCEEVI 143

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP       + +R+E      G+MR R F   DA+ F          
Sbjct: 144 ADIVRKEINSYKQLPKNFYHIQTKFRDEVRPRF-GVMRAREFVMKDAYSFHADYASLQAT 202

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
              +++    I+   G     V   T      GS      AE+
Sbjct: 203 YDAMYDAYCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAES 245



 Score = 84.8 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 62/171 (36%), Gaps = 12/171 (7%)

Query: 484 KDAIGRDWQCGTIQVDFNLPSR---FNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMI 539
            D  GR      I+V      R     A  V+         ++    +G  I R +   I
Sbjct: 424 PDGQGRLKLARGIEVGHVFQLRGKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAI 483

Query: 540 E-NFKGNLPLW---LSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           E N      +W   ++P + ++  +    + +  E A  I   L +    +  D R+E  
Sbjct: 484 EQNNDEKGIIWTKAMAPFEVVIVPMNYKKSDTVREAADRIYAELLAAGADVLLDDRDERA 543

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
              + +  +  IP  I+ GD+   E ++          Q V++ + +  +T
Sbjct: 544 GVLLNDSELLGIPHRIVIGDRALKEGNVEYAERRGNEAQAVAIGEIVARVT 594


>gi|257094575|ref|YP_003168216.1| prolyl-tRNA synthetase [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
 gi|257047099|gb|ACV36287.1| prolyl-tRNA synthetase [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
          Length = 574

 Score =  144 bits (364), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 49/222 (22%), Positives = 87/222 (39%), Gaps = 12/222 (5%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
            ++E   H+ + R   +  +A    G+  W   G ++ + +   +R ++      E++ P
Sbjct: 16  SDAEIISHQLMLRAGMIKRLA---GGIYTWMPIGLRVMRKVERIVREEMDRAGAIELSMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            V    LWQ+SG W+ Y   +   K      +  R F + P +      V    +KSYR+
Sbjct: 73  AVQPAELWQESGRWEKYGPELLRCKD-----RHQRDFVIGPTHEEVITDVVRKEVKSYRQ 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYK 416
           LP+   +    +R+E      G+MR R F   D + F +  E +  E   +      I+ 
Sbjct: 128 LPLHFYQVQVKFRDEIRPRF-GVMRGREFLMKDGYSFHSGFEDLQREYRNMFETYTRIFT 186

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNS 458
             G +   V   T      GS      A +  +  L    +S
Sbjct: 187 RLGLQFRAVAADTGAIGGTGSHEFHVLA-DSGEDALAYCPDS 227



 Score = 72.1 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 21/155 (13%), Positives = 56/155 (36%), Gaps = 13/155 (8%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN- 545
           R  + G I Q+           +++   +     ++    +G  + R +G  IE      
Sbjct: 408 RGIEVGHIFQLRTRYAEALKCTFLDESGQSR---VMEMGCYGIGVTRIVGAAIEQGHDER 464

Query: 546 ---LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
               P  ++P +  +  +    + +  + A  +   L    + +  D RNE       E 
Sbjct: 465 GIVFPAAIAPFEVCIVPMGYAKSQAVRDAADALYGELMREGIDVLLDDRNERPGVMFAEM 524

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            +  +P  ++ G++  ++  +  +    + +Q + 
Sbjct: 525 ELIGVPHRVVVGERGLAQGKLEYKGRVDSESQMLP 559


>gi|254496505|ref|ZP_05109377.1| prolyl-tRNA synthase [Legionella drancourtii LLAP12]
 gi|254354272|gb|EET12935.1| prolyl-tRNA synthase [Legionella drancourtii LLAP12]
          Length = 577

 Score =  144 bits (364), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 66/353 (18%), Positives = 126/353 (35%), Gaps = 38/353 (10%)

Query: 216 MLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKI 275
           M          +Q  L        ++E   H+ + R   +  +   GSG+  W   G K+
Sbjct: 1   MKLNSGAAMRASQWFLATLKETPNDAEIVSHQLMLRTGMIRKL---GSGLYTWMPLGLKV 57

Query: 276 FQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
            + +   +R ++   +  E+  P V    LWQ++G W+++   +  +K       + R +
Sbjct: 58  LRKVEHIVREEMNRINSVELLMPAVQPAELWQETGRWETFGGQLLTMKD-----SNGREY 112

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
              P +      +  + L+SY++LP    +  + +R+E      G+MR R F   DA+ F
Sbjct: 113 CYGPTHEEVITDIMRNELQSYKQLPRCFYQIQTKFRDEIRPRF-GVMRAREFIMKDAYSF 171

Query: 395 CT-KEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
               E + N    ++     I+   G +   V+  T       S                
Sbjct: 172 HLNLESLQNTYKDMYQAYCRIFDRMGLKYRAVEADTGAIGGSASHEF------------Q 219

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFE--YILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
            + +S +D I       + + Y    E    LK A   +    TI +  + P +     V
Sbjct: 220 VLADSGEDLIFY----SDASDYAANIEQAISLKPAKSTNQTTQTIAL-VDTPKQKTIAEV 274

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMI--------ENFKGNLPLWLSPIQAI 556
               +     M+   +    E  +  ++        E      PL  SP+Q +
Sbjct: 275 AQFMKIASSDMVKTLIVRGKEHPLVALVLRGDDELNEVKAIKHPLIHSPLQFV 327



 Score = 90.6 bits (223), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 24/172 (13%), Positives = 59/172 (34%), Gaps = 14/172 (8%)

Query: 484 KDAIGRDWQCGTI------QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
            D  G    C  I      Q+        NA  +N   +    +M+     G        
Sbjct: 402 PDGKGTLHSCRGIEVGHVFQLGDKYAKAMNAAVINEQGQLET-MMMGCYGLGITRVVAAA 460

Query: 538 MIENFKGNLPLWL---SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNET 590
           + ++      +W    +P Q ++  +    + +  + A  +    ++  + +  D RNE 
Sbjct: 461 IEQHHDEQGIIWPSNIAPFQVVIIPLNGHKSQAVKDQADVLYKQFRNAGIDVLLDDRNER 520

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
                 +H +  +P  ++  D+   +  +  +   +  T+ + L  A+  + 
Sbjct: 521 AGALFADHDLIGVPHRLVVSDRNLEQNCVEYKSRATGETKSLDLNTAVAEIV 572


>gi|325140439|gb|EGC62960.1| prolyl-tRNA synthetase [Neisseria meningitidis CU385]
          Length = 599

 Score =  144 bits (364), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 47/223 (21%), Positives = 85/223 (38%), Gaps = 11/223 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       E+    H+ + R      I  + SG+  W   G ++ + + + +R 
Sbjct: 32  ASQFFISTLKEAPAEAALASHKLMIRAG---LIKANASGLYTWMPMGLRVLRKVENVVRE 88

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E+  P V    LWQ+SG W+ Y   +  +K   D     R F + P      
Sbjct: 89  EMARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHD-----RDFCMGPTCEEVI 143

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP       + +R+E      G+MR R F   DA+ F          
Sbjct: 144 ADIVRKEINSYKQLPKNFYHIQTKFRDEVRPRF-GVMRAREFVMKDAYSFHADYASLQTT 202

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
            + +++    I+   G     V   T      GS      AE+
Sbjct: 203 YQDMYDAYCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAES 245



 Score = 86.4 bits (212), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 33/171 (19%), Positives = 64/171 (37%), Gaps = 12/171 (7%)

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFN---AFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMI 539
            D  GR      I+V      R     A  VN         ++    +G  I R +   I
Sbjct: 424 PDGQGRLKLTRGIEVGHVFQLRDKYTHAMNVNFLDNNGKSQIMEMGCYGIGITRVVAAAI 483

Query: 540 E-NFKGNLPLW---LSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           E N      +W   ++P + ++  +    + +  E A +I   L +    +  D R+E  
Sbjct: 484 EQNNDEKGIIWTKAMAPFEVVIVPMNYKKSDTVREAADKIYAELLAAGADVLLDDRDERA 543

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
              + +  +  IP  I+ GD+   E ++      +   Q V++ + +  +T
Sbjct: 544 GVLLNDSELLGIPHRIVIGDRALKEGNVEYAERRNNEAQAVAIGEIVARVT 594


>gi|10800405|gb|AAG23138.2|AF245446_1 prolyl-tRNA synthetase [Giardia intestinalis]
          Length = 542

 Score =  144 bits (364), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 79/468 (16%), Positives = 165/468 (35%), Gaps = 71/468 (15%)

Query: 195 KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMD 254
           K    +++        D ++     I G       ++T  L    ++       +    +
Sbjct: 7   KDSHGIVRGKQCNTARDQSKQQKQAIRGG------DVTFSLTKTRDTFADWFDAIMDAAE 60

Query: 255 LFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHL-WQQSGHWD 312
           L        G + +   G+ +   ++     +       +I  P V+ +    ++S H  
Sbjct: 61  LVDRRYPVKGCVVFRPYGFFMENAIMRLCEEEYAKVGISQILFPTVIPESFLKKESDHIK 120

Query: 313 SYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE 372
            + A  F V+       + R  AL+P +     ++F+  ++SY++LP+++ +  +++R+E
Sbjct: 121 GFEAECFWVEKGGLQPLEER-LALRPTSETAIYSMFSKWVRSYKDLPLKIHQTCTIFRHE 179

Query: 373 PSGSLHGLMRVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP 431
              +   L+RVR    ++AH    T E   ++      +I      F  E        R 
Sbjct: 180 TK-NTKPLIRVREIHWNEAHCCHATAEDAVSQLSDYWKVID---TIFSDELCFKGQKLRR 235

Query: 432 EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDW 491
                    WD                             GA Y    + ++    GR  
Sbjct: 236 V-------CWDRF--------------------------PGADYSEVSDVVMPC--GRVL 260

Query: 492 QCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG----IMIENFKGNL 546
           Q   I  +     S F+  Y N  +E  HP +      G   R +     I  ++    L
Sbjct: 261 QTAGIHNLGQRFSSTFDILYANKANESVHPYL---TCAGISTRVLACALSIHGDSGGLVL 317

Query: 547 PLWLSPIQAIVTTIT----------SSAVEYAQEIANLLKSH-HLSIETDFR-NETINYK 594
           P  ++PI  ++  I              +    EIA+ LKS   L +  D   ++++  K
Sbjct: 318 PPLIAPIHVVIIPIGCGKKNNQESDQQVLGKVNEIADTLKSKLGLRVSIDDDFSKSMGDK 377

Query: 595 IREHSIKKIPIIIICGDKEASERS--IGIRRFGSTTTQKVSLLDAIPI 640
           +  + +K +P+ I  G ++ +     +  R  G    + + + + + +
Sbjct: 378 LYYYELKGVPLRIEVGQRDLANGQCIVVPRDVGKDQKRVIPITEVMKV 425


>gi|326426858|gb|EGD72428.1| prolyl-tRNA synthetase [Salpingoeca sp. ATCC 50818]
          Length = 447

 Score =  144 bits (364), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 82/455 (18%), Positives = 168/455 (36%), Gaps = 53/455 (11%)

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISY 282
                +  +       + +    H+ L R   ++   + GSG+        ++ Q L S 
Sbjct: 6   FNSFDRLFVPLLKEVPKHAVAHSHQLLLRGGYIW---QAGSGLYALLPMANRVVQRLQSL 62

Query: 283 MRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           +R ++     +E   P + D+HLWQQSG W      +F ++           + L   + 
Sbjct: 63  VRAELNAIGSQECVLPAITDKHLWQQSGRWQEAGDELFRLEDRKGAA-----YCLAATHE 117

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
               A+ +  + S+R LP+ L +    YR+E     +GL+R R F   D + F + EQ  
Sbjct: 118 ETVTALVSSLVSSHRSLPLYLYQMQPKYRDEMRPR-YGLLRCREFMMKDMYTFDSSEQDA 176

Query: 402 NECL-KIHNLIISIYKDFGFEKIMVK-----------LSTRPEKRVGSDALW-----DDA 444
                K+      I +  G     V+              + +  +G D L      + A
Sbjct: 177 RATYAKVVECYQRILQRLGVPFAKVQADTGLIGGSLSHEFQIKAEIGEDELIFCDTCNQA 236

Query: 445 ENIMK--GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNL 502
            NI K  G++D   ++S     +         +       +    G  +  GT       
Sbjct: 237 ANIEKIDGLIDACPHASPSPSTSPRPPSASCSWTTSKGIEV----GHAFLLGT-----KY 287

Query: 503 PSRFNAFYVNSHSEKCHPVMIHRAVFG-SIERFIGIMIENFKGN----LPLWLSPIQAIV 557
            + F+A ++++ S++     IH   +G  + R +  + E          P+ ++P    +
Sbjct: 288 STVFDAAFLDADSQRQD---IHMGCYGLGLTRMLSAVAEAQHDAEGLIWPIAMAPFVVSI 344

Query: 558 TTITSSAVEYAQEIANLLKSHHLSIE------TDFRNETINYKIREHSIKKIPIIIICGD 611
            ++        ++   L +  +   E       D R+ +  +K+    +  IP  ++ GD
Sbjct: 345 ASVGRMNTFKDEKCRALYEVLNSRPELSDLIVLDTRDMSPRHKLANSRMVGIPFTVLVGD 404

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
                  + +    S   Q +S+ + + +L+  +L
Sbjct: 405 W-FDSEHLEVYARTSHDKQDMSVEEFVSLLSSPAL 438


>gi|284030961|ref|YP_003380892.1| prolyl-tRNA synthetase [Kribbella flavida DSM 17836]
 gi|283810254|gb|ADB32093.1| prolyl-tRNA synthetase [Kribbella flavida DSM 17836]
          Length = 587

 Score =  144 bits (364), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 43/209 (20%), Positives = 84/209 (40%), Gaps = 11/209 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +   A    G+  W   G ++ + +   +R ++     +E+  P 
Sbjct: 19  DAEVPSHKLLVRAGYIRRTA---PGMYTWLPLGLRVLRNVEKIVREEMDAIGAQELVFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++ +G W  Y  N+F +K      +      L P +             SY++L
Sbjct: 76  LLPREPYEATGRWTEYGPNLFRLKD-----RKGADMLLGPTHEEMFTLAVKDLYSSYKDL 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKD 417
           P+ + +  + YR+E       L R R F   D++ F   +        +H    I I+  
Sbjct: 131 PLSIYQIQNKYRDEARPRAGVL-RGREFVMKDSYSFDVDQAGLQASYDLHRKAYIRIFDR 189

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
            GF+ ++V+  +       S+     AEN
Sbjct: 190 LGFDYVIVQAMSGAMGGSASEEFLAVAEN 218



 Score = 82.1 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 63/163 (38%), Gaps = 11/163 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G I Q+        +   ++ + +     M    V   + R +  + E       
Sbjct: 424 RGIEMGHIFQLGQKYAEALDLKVLDQNGKLVTVTMGSYGV--GVTRAVAAIAEGNHDELG 481

Query: 546 --LPLWLSPIQAIVTTITSSAVEYAQ--EIANLLKSHHLSIETDFRNE-TINYKIREHSI 600
              P  ++P    +         +A+  E+A  L+S  L++  D R + +   K ++  +
Sbjct: 482 LIWPREITPADVHLVATGKETEVFAKAAELATELESRGLTVLYDDREKVSPGVKFKDAEL 541

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             IP I + G K  ++ +I ++   S     V++ + +  L +
Sbjct: 542 LGIPTIAVVG-KGLADGTIEVKDRRSGDRTDVAVTEVVDKLVE 583


>gi|127513524|ref|YP_001094721.1| prolyl-tRNA synthetase [Shewanella loihica PV-4]
 gi|166980157|sp|A3QG64|SYP_SHELP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|126638819|gb|ABO24462.1| prolyl-tRNA synthetase [Shewanella loihica PV-4]
          Length = 569

 Score =  144 bits (364), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 46/245 (18%), Positives = 91/245 (37%), Gaps = 11/245 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  L+        +E   H+ + R   +     + SG+  W   G ++ + + + +R +
Sbjct: 4   SKYLLSTQKETPANAEVVSHQLMLRAGMIR---RNASGLYSWLPSGLRVLRKVEAIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           + +    EI  P V    LW ++G WD +   +   +      +  R F L P +     
Sbjct: 61  MNNAGAVEILMPMVQPADLWVETGRWDKFGPELLRFQD-----RHNRDFVLGPTHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +    + SY++LP+ L +  + +R+E      G+MR R F   DA+ F    E M +  
Sbjct: 116 DIIRKEVSSYKQLPLNLYQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHLDQETMDDTY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
             ++    +I    G     V   T       S      A +    +  + ++     I 
Sbjct: 175 QAMYTAYSNILGRMGLAFRPVLADTGSIGGSMSHEFHVLANSGEDLIAYSTESDYAANIE 234

Query: 465 TGVLL 469
                
Sbjct: 235 KAEAP 239



 Score = 80.6 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 21/163 (12%), Positives = 59/163 (36%), Gaps = 11/163 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G I Q+  N      A  ++ + +    +++     G   R +   IE    +  
Sbjct: 406 RGIEVGHIFQLGTNYSKAMGASVLDENGKAQT-LLMGCYGVGVS-RIVAAAIEQNHDDRG 463

Query: 546 --LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
              P  ++P +  +  +    +    + A+++ + L    + +  D R E       +  
Sbjct: 464 IIWPAAIAPFKVGILPMNMHKSHRIKDMAEKLYSDLSDAGIEVLFDDRKERPGVMFADME 523

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +  +P +I+ G++         +   +   Q++   + +  + 
Sbjct: 524 LIGLPHVIVIGERNIDNGVFEYKNRRTGEKQEIPFEEIVDFIK 566


>gi|317125361|ref|YP_004099473.1| prolyl-tRNA synthetase [Intrasporangium calvum DSM 43043]
 gi|315589449|gb|ADU48746.1| prolyl-tRNA synthetase [Intrasporangium calvum DSM 43043]
          Length = 588

 Score =  144 bits (363), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 44/208 (21%), Positives = 85/208 (40%), Gaps = 11/208 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   HR L R   +  ++    GV  W   G ++ + +   +R ++     +E+  P 
Sbjct: 19  DAEVPSHRLLVRAGYIRRVS---PGVYTWLPLGLRVLRNVERIVREEMDAIGAQELLFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  +  SG W  Y  N+F ++      +      L P +             SY++L
Sbjct: 76  LLPREPFDASGRWAEYGDNIFRLQD-----RKGADHLLGPTHEEMFTLTVKDLYSSYKDL 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKD 417
           P+ + +  + YR+E      GL+R R F   D++ F   E   ++  + H    + I+  
Sbjct: 131 PLSIYQIQTKYRDEARPR-AGLLRGREFVMKDSYSFDIDEAGLDKSYQAHRDAYVRIFDR 189

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAE 445
            GF  ++V+          S+     AE
Sbjct: 190 LGFHYVIVEAMAGAMGGSKSEEFLATAE 217



 Score = 78.3 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 38/210 (18%), Positives = 81/210 (38%), Gaps = 14/210 (6%)

Query: 444 AENIMKGVLDTIKNSSQDRINTGVLLGEGAFY--GPKFEYILKDAIGRDWQCGTIQVDFN 501
           A    K VLD +     +  +  +   E  F    P  +++L+ A G +      Q+   
Sbjct: 380 ANEPGKHVLDLVAGRDFEG-DGAIEAAEVRFGDPCPNCDHVLEGARGIEM-GHVFQLGKK 437

Query: 502 LPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIV 557
                +   ++ + +    VM    V   + R +  ++E    +     P  L+P    +
Sbjct: 438 YAEALDLRVLDQNGKLTTVVMGSYGV--GVSRAVACVVEGNYDDSGIIWPRELTPADVHI 495

Query: 558 TTITSSAVEY--AQEIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEA 614
                    +  A +IA  L++H L+   D R   +   K ++  +  +P II+ G +  
Sbjct: 496 VAAGKDEPLFRAADDIARDLEAHGLTCIVDDRKGVSPGVKFKDSELIGVPTIIVVG-RGL 554

Query: 615 SERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           ++  + I+   S   ++V+L   +  +  E
Sbjct: 555 ADGKVEIKDRRSGERREVALDSVVESVLAE 584


>gi|297581262|ref|ZP_06943186.1| prolyl-tRNA synthetase [Vibrio cholerae RC385]
 gi|297534578|gb|EFH73415.1| prolyl-tRNA synthetase [Vibrio cholerae RC385]
          Length = 571

 Score =  144 bits (363), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 47/249 (18%), Positives = 95/249 (38%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R+
Sbjct: 3   TSKYLLSTLKETPNDAEVVSHKLMLRAGMIRKLA---SGLYTWLPTGLRVLRKVENIVRQ 59

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           +I      E   P V    LW+++G  +     +        T +  R F L P      
Sbjct: 60  EIDNAGAIETLMPVVQPFELWEETGRSEKMGPELLRF-----TDRHERPFVLSPTAEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
            A+  + + SY++LP+ L +  + +R+E      G+MR R F   DA+ F   +    + 
Sbjct: 115 TALVRNEVSSYKQLPLNLYQIQTKFRDERRPRF-GVMRAREFCMMDAYSFDIDKAGLEKS 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            + +H      +   G +   V   T      GS      AE+    +  + ++     I
Sbjct: 174 YEAMHVAYCKAFDRMGLDYRPVLADTGAIGGNGSHEFHVLAESGEDLIAFSTESDYAANI 233

Query: 464 NTGVLLGEG 472
                +   
Sbjct: 234 EKAEAVAPA 242



 Score = 86.4 bits (212), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/166 (17%), Positives = 64/166 (38%), Gaps = 13/166 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           + R  + G I Q+  N   + N   ++S+ +    V++    +G  + R +   IE    
Sbjct: 405 LKRGIEVGHIFQLGTNYSEKMNCGVLDSNGKN---VILEMGCYGIGVSRVVAAAIEQNHD 461

Query: 545 N----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +     P  ++P Q  +  +    +    + A+++   L +  + +  D R E       
Sbjct: 462 DYGIIWPDAIAPFQVAIVPMNMHKSERVQQAAEKLYAELTAAGIEVLFDDRKERPGVMFS 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +  +  +P  II GD+   E     +   S   + V++   I  + 
Sbjct: 522 DMELIGVPHTIIIGDRSMDEGHFEYKNRRSGEKEAVAMASIIDFIQ 567


>gi|183597570|ref|ZP_02959063.1| hypothetical protein PROSTU_00851 [Providencia stuartii ATCC 25827]
 gi|188023065|gb|EDU61105.1| hypothetical protein PROSTU_00851 [Providencia stuartii ATCC 25827]
          Length = 575

 Score =  144 bits (363), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 49/245 (20%), Positives = 99/245 (40%), Gaps = 11/245 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSKYLLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYDWLPTGVRVLRKVENIVRE 59

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E++ P V    LWQ+SG W+ Y   +       +     R F L P +    
Sbjct: 60  EMENAGSIEVSLPVVQPADLWQESGRWEQYGPELLRFADRGE-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + + SY++LP+ L +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLVRNEITSYKQLPLNLFQIQTKFRDEVRPRF-GIMRSREFIMKDAYSFHTSQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   GF+   V+  T       S      A++    ++ +  +     I
Sbjct: 174 YDAMYEAYSKIFTRIGFDFRAVQADTGSIGGSASHEFQVLAQSGEDDIVFSTGSDFAANI 233

Query: 464 NTGVL 468
                
Sbjct: 234 ELAEA 238



 Score = 87.5 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 56/167 (33%), Gaps = 13/167 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           I R  + G I Q+         A   N      H  ++    +G  + R +   IE    
Sbjct: 405 IKRGIEVGHIFQLGTKYSEAMKASVQNEEG---HNQIVTMGCYGIGVTRIVAAAIEQSHD 461

Query: 545 N----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                 P  ++P    +  +         E A+++   LK+  + +  D R E       
Sbjct: 462 ERGIIWPDAIAPFHVAILPMNMHKSYRVKEVAEKLYADLKAQGIDVIFDDRKERPGVMFA 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  +  +P  I+ GD+      +  +   +     + L + +  L +
Sbjct: 522 DMELIGVPYTIVIGDRNLDNNQVEYKARRNDEKALIGLDNVVSFLKE 568


>gi|229525492|ref|ZP_04414897.1| prolyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
 gi|229339073|gb|EEO04090.1| prolyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
 gi|327483617|gb|AEA78024.1| Prolyl-tRNA synthetase Bacterial type [Vibrio cholerae LMA3894-4]
          Length = 571

 Score =  144 bits (363), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 47/249 (18%), Positives = 95/249 (38%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R+
Sbjct: 3   TSKYLLSTLKETPNDAEVVSHKLMLRAGMIRKLA---SGLYTWLPTGLRVLRKVENIVRQ 59

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           +I      E   P V    LW+++G  +     +        T +  R F L P      
Sbjct: 60  EIDNAGAIETLMPVVQPFELWEETGRSEKMGPELLRF-----TDRHERPFVLSPTAEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
            A+  + + SY++LP+ L +  + +R+E      G+MR R F   DA+ F   +    + 
Sbjct: 115 TALVRNEVSSYKQLPLNLYQIQTKFRDERRPRF-GVMRAREFCMMDAYSFDIDKAGLEKS 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            + +H      +   G +   V   T      GS      AE+    +  + ++     I
Sbjct: 174 YEAMHVAYCKAFDRMGLDYRPVLADTGAIGGNGSHEFHVLAESGEDLIAFSTESDYAANI 233

Query: 464 NTGVLLGEG 472
                +   
Sbjct: 234 EKAEAVAPA 242



 Score = 86.4 bits (212), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/166 (17%), Positives = 64/166 (38%), Gaps = 13/166 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           + R  + G I Q+  N   + N   ++S+ +    V++    +G  + R +   IE    
Sbjct: 405 LKRGIEVGHIFQLGTNYSEKMNCGVLDSNGKN---VILEMGCYGIGVSRVVAAAIEQNHD 461

Query: 545 N----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +     P  ++P Q  +  +    +    + A+++   L +  + +  D R E       
Sbjct: 462 DYGIIWPDAIAPFQVAIVPMNMHKSERVQQAAEKLYAELTAAGIEVLFDDRKERPGVMFS 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +  +  +P  II GD+   E     +   S   + V++   I  + 
Sbjct: 522 DMELIGVPHTIIIGDRSMDEGHFEYKNRRSGEKEAVAMASIIDFIQ 567


>gi|317164487|gb|ADV08028.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 599

 Score =  144 bits (363), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 46/223 (20%), Positives = 84/223 (37%), Gaps = 11/223 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       E+    H+ + R      I  + SG+  W   G ++ + + + +R 
Sbjct: 32  ASQFFISTLKEAPAEAAFASHKLMIRAG---LIKANASGLYTWMPMGLRVLRKVENVVRE 88

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E+  P V    LWQ+SG W+ Y   +  +K      +  R F + P      
Sbjct: 89  EMARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKD-----RHERDFCMGPTCEEVI 143

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP       + +R+E      G+MR R F   DA+ F          
Sbjct: 144 ADIVRKEINSYKQLPKNFYHIQTKFRDEVRPRF-GVMRAREFVMKDAYSFHADYASLQAT 202

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
              +++    I+   G     V   T      GS      AE+
Sbjct: 203 YDAMYDAYCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAES 245



 Score = 84.1 bits (206), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 62/171 (36%), Gaps = 12/171 (7%)

Query: 484 KDAIGRDWQCGTIQVDFNLPSR---FNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMI 539
            D  GR      I+V      R     A  V+         ++    +G  I R +   I
Sbjct: 424 PDGQGRLKLARGIEVGHVFQLRGKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAI 483

Query: 540 E-NFKGNLPLW---LSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           E N      +W   ++P + ++  +    + +  E A  I   L +    +  D R+E  
Sbjct: 484 EQNNDEKGIIWTKAMAPFEVVIVPMNYKKSDTVREAADRIYAELLAAGADVLLDDRDERA 543

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
              + +  +  IP  I+ GD+   E ++          Q V++ + +  +T
Sbjct: 544 GVLLNDSELLGIPHRIVIGDRALKEGNVEYAERRDNEAQAVAIGEIVARVT 594


>gi|260495035|ref|ZP_05815164.1| prolyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
 gi|260197478|gb|EEW94996.1| prolyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
          Length = 567

 Score =  144 bits (363), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 57/246 (23%), Positives = 99/246 (40%), Gaps = 11/246 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  +       +E+E   H+ + R   +  +A   SG+  +   G++  + + + +R 
Sbjct: 3   FSKAYIKTLKETPKEAEIASHKLMLRAGMIKKLA---SGIYAYLPLGYRTIRKIENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LWQ+SG WD     M  +K      +  R F L P      
Sbjct: 60  EMDRAGALELLMPVVQPAELWQESGRWDVMGPEMLRLKD-----RHERGFVLSPTQEEMI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
            A+    + SY+ LP+ L    + +R+E      GLMR R FT  DA+ F T  E +  E
Sbjct: 115 TAIVRSDISSYKSLPINLYHIQTKFRDERRPRF-GLMRGREFTMKDAYSFHTSQESLDKE 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            L + +    I+   G +   V   +      GS      AE+    ++ +  +     I
Sbjct: 174 FLNMRDAYTRIFTRCGLKFRPVDADSGNIGGSGSQEFQVLAESGEDEIIYSDGSEYAANI 233

Query: 464 NTGVLL 469
            T V  
Sbjct: 234 ETAVSE 239



 Score = 85.2 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 29/162 (17%), Positives = 65/162 (40%), Gaps = 9/162 (5%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  +CG I  +        NA Y++   +  + +++     G        + +    N  
Sbjct: 403 RGIECGQIFKLGDKYSKAMNATYLDEKGQSHY-MLMGCYGIGVTRTMAAAIEQYNDENGI 461

Query: 548 LWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W    +P    V  +     + V  A++I N L+   + +  D R+E   +K ++  + 
Sbjct: 462 IWPVSIAPYIVDVIPVNIKNEAQVNLAEKIYNNLQEEKIDVMLDDRDEKPGFKFKDADLI 521

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             P  ++ G K A E  + ++   +  T ++S  + I  + +
Sbjct: 522 GFPFKVVVGKK-AEEGRVELKIRKTGETFEISQNEIINKIKE 562


>gi|254225105|ref|ZP_04918719.1| prolyl-tRNA synthetase [Vibrio cholerae V51]
 gi|125622492|gb|EAZ50812.1| prolyl-tRNA synthetase [Vibrio cholerae V51]
          Length = 571

 Score =  144 bits (363), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 47/249 (18%), Positives = 95/249 (38%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R+
Sbjct: 3   TSKYLLSTLKETPNDAEVVSHKLMLRAGMIRKLA---SGLYTWLPTGLRVLRKVENIVRQ 59

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           +I      E   P V    LW+++G  +     +        T +  R F L P      
Sbjct: 60  EIDNAGAIETLMPVVQPFELWEETGRSEKMGPELLRF-----TDRHERPFVLSPTAEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
            A+  + + SY++LP+ L +  + +R+E      G+MR R F   DA+ F   +    + 
Sbjct: 115 TALVRNEVSSYKQLPLNLYQIQTKFRDERRPRF-GVMRAREFCMMDAYSFDIDKAGLEKS 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            + +H      +   G +   V   T      GS      AE+    +  + ++     I
Sbjct: 174 YEAMHVAYCKAFDRMGLDYRPVLADTGAIGGNGSHEFHVLAESGEDLIAFSTESDYAANI 233

Query: 464 NTGVLLGEG 472
                +   
Sbjct: 234 EKAEAVAPA 242



 Score = 86.0 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 28/165 (16%), Positives = 64/165 (38%), Gaps = 13/165 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           + R  + G I Q+  N   + N   ++S+ +    V++    +G  + R +   IE    
Sbjct: 405 LKRGIEVGHIFQLGTNYSEKMNCGVLDSNGKN---VILEMGCYGIGVSRVVAAAIEQNHD 461

Query: 545 N----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +     P  ++P Q  +  +    +    + A+++   L +  + +  D R E       
Sbjct: 462 DYGIIWPDAIAPFQVAIVPMNMHKSERVQQAAEKLYAELTAAGIEVLFDDRKERPGVMFS 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           +  +  +P  +I GD+   E     +   S   + V++   I  +
Sbjct: 522 DMELIGVPHTLIIGDRSMDEGHFEYKNRRSGEKEAVAMASIIDFI 566


>gi|303326973|ref|ZP_07357415.1| proline--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
 gi|302862961|gb|EFL85893.1| proline--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
          Length = 580

 Score =  144 bits (363), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 51/207 (24%), Positives = 87/207 (42%), Gaps = 11/207 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +  +    SG+  +   G KI   +   +R +I    ++E+  P 
Sbjct: 17  DAEVVSHKLLLRAGMVRRL---TSGLYIYLPLGLKIIDKIARVVREEINASGFQELLMPM 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    LW+++G W+ Y   +   K  ++     R + L P +      +    ++SYR+L
Sbjct: 74  VQPADLWKETGRWEHYGKELLRFKDRNE-----RDYCLGPTHEEVITDLVRGEVRSYRQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKD 417
           PVRL +  S +R+E      GLMR R F   D + F        E  K +++    I+K 
Sbjct: 129 PVRLYQIQSKFRDEIRPRF-GLMRGREFMMKDGYSFDADIAGAEESYKLMYDAYTRIFKR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDA 444
            G +   V+  T       S      A
Sbjct: 188 LGLKFRAVEADTGSIGGNFSHEFMVLA 214



 Score = 72.1 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 22/143 (15%), Positives = 54/143 (37%), Gaps = 9/143 (6%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPI 553
           +        +A +++ + ++   +M    +   + R     IE          P  ++P 
Sbjct: 416 LGLKYSESMHAAFLDENGKEKLMIMGCYGI--GVSRVAAAAIEQNHDENGIVFPPPVAPF 473

Query: 554 QAIVTTITSSAVEY---AQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           + I+  +     E    A+EI  +L+   + +  D R E    K ++  +   P+ ++ G
Sbjct: 474 ECILLNLDPRNAEVTAKAEEIYAMLRDMGVDVLLDDREERPGVKFKDADLLGAPMQLVVG 533

Query: 611 DKEASERSIGIRRFGSTTTQKVS 633
            K  +   +  +   S    ++S
Sbjct: 534 GKGLARGIVECKDRRSGEKGELS 556


>gi|269960577|ref|ZP_06174949.1| prolyl-tRNA synthetase [Vibrio harveyi 1DA3]
 gi|269834654|gb|EEZ88741.1| prolyl-tRNA synthetase [Vibrio harveyi 1DA3]
          Length = 571

 Score =  144 bits (363), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 62/330 (18%), Positives = 115/330 (34%), Gaps = 17/330 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +   L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R+
Sbjct: 3   TSNYLLSTLKETPNDAEVVSHQLMLRAGMIRKLA---SGLYTWLPTGLRVLRKVENIVRQ 59

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           +I      E   P V    LW+++G  +     +        T +  R F L P      
Sbjct: 60  EIDNAGAVETLMPVVQPFELWEETGRSEKMGPELLRF-----TDRHTRPFVLSPTAEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
            ++  + + SY++LP+ L +  + +R+E      G+MR R F   DA+ F    E +   
Sbjct: 115 TSLVRNEVSSYKQLPLNLYQIQTKFRDERRPRF-GVMRAREFCMMDAYSFDIDKEGLEKS 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +H+     +   G E   V   +      GS      AE+    +  + ++     I
Sbjct: 174 YQAMHDAYCKAFDRMGLEYRPVLADSGAIGGSGSQEFHVLAESGEDLIAFSTESDYAANI 233

Query: 464 NTGVLLGEGAFYG-PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
                         P  E  L D          ++       +         S++    +
Sbjct: 234 EKAEAAAPAGERAEPTQEMTLVDTPNAKTIAELVEQHGLAIEKTVKTLFVKASDEVDADI 293

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
           I   V G  E     + E    NLP   SP
Sbjct: 294 IALIVRGDHE-----LNEVKAENLPQVASP 318



 Score = 86.8 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 60/168 (35%), Gaps = 13/168 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           + R  + G I Q+        N   +    +    V++    +G  + R +   IE    
Sbjct: 405 LKRGIEVGHIFQLGNVYSEAMNCGVLGPDGKN---VILEMGCYGIGVSRVVASAIEQNHD 461

Query: 545 N----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                 P  L+P Q  +  +    +    E A+++   L +  + +  D R E       
Sbjct: 462 KYGIIWPDALAPFQVAIVPMNMHKSEEVKEAAEKLYAELTAMGIEVLFDDRKERPGVMFS 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  +  IP  I+ GD+   E +   +   S     V++ D +  +  +
Sbjct: 522 DMELIGIPHTIVIGDRSMKEGNFEYKNRRSGEKTAVAMADIVEHVKAQ 569


>gi|256846083|ref|ZP_05551541.1| prolyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
 gi|256719642|gb|EEU33197.1| prolyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
          Length = 567

 Score =  144 bits (363), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 56/246 (22%), Positives = 98/246 (39%), Gaps = 11/246 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  +       +E+E   H+ + R   +  +A   SG+  +   G++  + + + +R 
Sbjct: 3   FSKAYIKTLKETPKEAEIASHKLMLRAGMIKKLA---SGIYAYLPLGYRTIKKIENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LWQ+SG WD     M  +K      +  R F L P      
Sbjct: 60  EMDRAGALELLMPVVQPAELWQESGRWDVMGPEMLRLKD-----RHERDFVLSPTQEEMI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
            A+    + SY+ LP+ L    + +R+E      GLMR R FT  DA+ F T  E +  E
Sbjct: 115 TAIVRSDISSYKSLPINLYHIQTKFRDERRPRF-GLMRGREFTMKDAYSFHTSQESLDEE 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            L + +    I+   G +   V   +      GS      AE+    ++ +  +     I
Sbjct: 174 FLNMRDTYSRIFTRCGLKFRPVDADSGNIGGSGSQEFQVLAESGEDEIIYSDGSEYAANI 233

Query: 464 NTGVLL 469
              V  
Sbjct: 234 EKAVSE 239



 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 63/162 (38%), Gaps = 9/162 (5%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  +CG I  +        NA Y++ + +  + +++     G        + +N   N  
Sbjct: 403 RGIECGQIFKLGDKYSKAMNATYLDENGKTQY-MLMGCYGIGVTRTMAAAIEQNNDENGI 461

Query: 548 LWL---SPIQAIVTT---ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W    +P    V          V  A++I N L+   +    D R+E   +K ++  + 
Sbjct: 462 IWPVSIAPYTVDVIPANIKNEVQVSLAEKIYNELEEEKIDTMLDDRDEKPGFKFKDADLI 521

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             P  ++ G + A E  + ++   +  T ++   + I  + +
Sbjct: 522 GFPFKVVVGKR-ADEGIVELKIRRTGETLELPQNEIIAKIKE 562


>gi|24374667|ref|NP_718710.1| prolyl-tRNA synthetase [Shewanella oneidensis MR-1]
 gi|81845788|sp|Q8ECI8|SYP_SHEON RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|24349306|gb|AAN56154.1|AE015752_11 prolyl-tRNA synthetase [Shewanella oneidensis MR-1]
          Length = 570

 Score =  144 bits (363), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 46/245 (18%), Positives = 90/245 (36%), Gaps = 11/245 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  L+        +E   H+ + R   +     + SG+  +   G ++ + + + +R +
Sbjct: 4   SKYLLSTQKETPANAEVISHQLMLRAGMIR---RNASGLYSYLPSGLRVLRKVEAIVREE 60

Query: 287 IK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      EI  P V    LW ++G WD +   +   K      +  R F L P +     
Sbjct: 61  MNKAGAIEILMPMVQPADLWVETGRWDKFGPELLRFKD-----RHNRDFVLGPTHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    + SY++LP+ L +  + +R+E      G+MR R F   DA+ F       NE  
Sbjct: 116 DLIRKEVSSYKQLPLNLYQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHLDMDTLNETY 174

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
           + ++    +I    G     V   T       S      A++    +  +  +     I 
Sbjct: 175 EAMYQAYSNILSRMGLAFRPVLADTGSIGGSMSHEFHVLAQSGEDLIAYSTGSDYAANIE 234

Query: 465 TGVLL 469
                
Sbjct: 235 KAESP 239



 Score = 84.4 bits (207), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 59/168 (35%), Gaps = 13/168 (7%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE--- 540
           A+ R  + G I Q+  N     NA  ++ + +     ++    +G  + R +   IE   
Sbjct: 403 AMARGIEVGHIFQLGTNYSKSMNATVLDENGKSQ---VLLMGCYGVGVSRIVAAAIEQNF 459

Query: 541 -NFKGNLPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            +     P  ++P    +  +    +    + A+++   L +  + +  D R E      
Sbjct: 460 DDRGIVWPEAIAPFSVGILPMNMHKSHRVTDIAEQLYKDLSAAGIDVLLDDRKERPGVMF 519

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +  +  IP  ++ GD+         +   +   Q V     +  L  
Sbjct: 520 ADMELIGIPHTVVIGDRNIDAGVFEYKNRRTGEKQDVPFDQIVDFLKN 567


>gi|325128468|gb|EGC51349.1| prolyl-tRNA synthetase [Neisseria meningitidis N1568]
          Length = 570

 Score =  144 bits (363), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 48/223 (21%), Positives = 85/223 (38%), Gaps = 11/223 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       E+    H+ + R      I  + SG+  W   G ++ + + + +R 
Sbjct: 3   ASQFFISTLKEAPAEAALASHKLMIRAG---LIKANASGLYTWMPMGLRVLRKVENVVRE 59

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E+  P V    LWQ+SG W+ Y   +  +K   D     R F + P      
Sbjct: 60  EMARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHD-----RDFCMGPTCEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP       + +R+E      G+MR R F   DA+ F          
Sbjct: 115 ADIVRKEINSYKQLPKNFYHIQTKFRDEVRPRF-GVMRAREFVMKDAYSFHADYASLQTT 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
              +++    I+   G E   V   T      GS      AE+
Sbjct: 174 YDAMYDAYCRIFTRLGLEFRPVAADTGSIGGTGSHEFQVLAES 216



 Score = 85.2 bits (209), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 64/171 (37%), Gaps = 12/171 (7%)

Query: 484 KDAIGRDWQCGTIQVDFNLPSR---FNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMI 539
            D  GR      I+V      R     A  V+         ++    +G  I R +   I
Sbjct: 395 PDGQGRLKLARGIEVGHVFQLRDKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAI 454

Query: 540 E-NFKGNLPLW---LSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           E N      +W   ++P + ++  +    + +  E A +I   L +    +  D R+E  
Sbjct: 455 EQNNDEKGIIWTKAMAPFEVVIVPMNYKKSDTVREAADKIYAELLAAGADVLLDDRDERA 514

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
              + +  +  IP  I+ GD+   E ++      +   Q V++ + +  +T
Sbjct: 515 GVLLNDSELLGIPHRIVIGDRALKEGNVEYAERRNNEAQAVAIGEIVARVT 565


>gi|171057265|ref|YP_001789614.1| prolyl-tRNA synthetase [Leptothrix cholodnii SP-6]
 gi|226701306|sp|B1XYW5|SYP_LEPCP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|170774710|gb|ACB32849.1| prolyl-tRNA synthetase [Leptothrix cholodnii SP-6]
          Length = 581

 Score =  144 bits (363), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 54/280 (19%), Positives = 101/280 (36%), Gaps = 11/280 (3%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  +        ++E + H+ + R   +  +   G+G+  +   G ++ + + + +R 
Sbjct: 3   ASQFFIATLKEAPADAEVKSHQLMMRAGMIKRL---GAGIYNYMPMGLRVIRKVEAIIRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LWQ++G +D     +  VK   D     R F ++P +    
Sbjct: 60  EMNRAGAVELLMPVVQPAELWQETGRFDKMGPELLRVKDRHD-----RDFIIQPTSEEVV 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    L+SY++LP       + +R+E      G+MR R FT  DA+ F          
Sbjct: 115 TDIARQELRSYKQLPKNFYHIQTKFRDERRPRF-GIMRGREFTMKDAYSFDRDAASAARS 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +      I+  FG +   V   T       S      A+     ++    +     I
Sbjct: 174 YDAMFAAYKRIFDRFGLQYRAVAADTGAIGGDLSHEFQVIADTGEDAIVYCPTSDYAANI 233

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLP 503
                +   A  G   E + K        C  +    NLP
Sbjct: 234 ELAEAVSLIAERGAATESMAKTPTPGKSTCADVAQLLNLP 273



 Score = 77.9 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 26/176 (14%), Positives = 59/176 (33%), Gaps = 13/176 (7%)

Query: 477 PKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
           P  +     AI R  + G +  +        NA Y++ + +   P  +    +G  + R 
Sbjct: 404 PSPDGQGVLAIQRGIEVGHVFFLGTKYSKAMNATYLDENGK---PQFMEMGCYGIGVTRI 460

Query: 535 IGIMIENFKGN----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDF 586
           +G  IE          P  ++P   +V  I    ++     A  + + L++  + +  D 
Sbjct: 461 LGAAIEQKHDARGILWPDAIAPFTVVVCPIGYDRSAEVKAAADALHDELQAAGIDVMLDD 520

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           R E       +  +  +P  ++  D+      +  +         V   +    + 
Sbjct: 521 RGERPGAMFADWELIGVPHRVVISDRGLKAGQVEYQGRCDEAASTVPAAEVAAFVK 576


>gi|15896426|ref|NP_349775.1| prolyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|81854743|sp|Q97ED5|SYP_CLOAB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|15026247|gb|AAK81115.1|AE007813_2 Prolyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|325510583|gb|ADZ22219.1| prolyl-tRNA synthetase [Clostridium acetobutylicum EA 2018]
          Length = 570

 Score =  144 bits (363), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 53/249 (21%), Positives = 96/249 (38%), Gaps = 11/249 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +   +        E+E   H+ + R   +  +A   SGV  +   G K  + + + +R +
Sbjct: 4   SNMLMLTLRESPAEAEIESHKLMLRSGMIRKMA---SGVYNYMPLGLKALKKVENIIREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E     +L   LW++SG W+ +   MF +K  ++     R F L P +     
Sbjct: 61  MNAAGAQEFLASALLPSELWKESGRWEVFGPEMFKLKDRNE-----REFCLGPTHEEVFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
                 +KSY++LPV L +  + YR+E      G++R R F   DA+ F    E +    
Sbjct: 116 DFARSEIKSYKQLPVNLYQIQTKYRDERRPRF-GMIRSREFVMKDAYSFDKDNEGLDVSY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            K++     I+K        V   +      GS      +E     +    + +    I 
Sbjct: 175 NKMYEAYTKIFKRCNVSCSAVAADSGAMGGSGSAEFMVKSEIGEDEIAFCTECNYAANIE 234

Query: 465 TGVLLGEGA 473
               + E A
Sbjct: 235 KAPAVPEKA 243



 Score = 93.3 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 34/175 (19%), Positives = 68/175 (38%), Gaps = 9/175 (5%)

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
            PK    L  A G +      ++         A++V+ + E   P+++     G      
Sbjct: 390 CPKCGKPLTIARGIEV-GHIFKLGTKYSEAMKAYFVDENGESK-PLIMGCYGIGVNRTMS 447

Query: 536 GIMIENFKGNLPLWL---SPIQAIVTT---ITSSAVEYAQEIANLLKSHHLSIETDFRNE 589
            ++ ++   N  +W    +P + IV      +   ++ A+++   LK   +    D RNE
Sbjct: 448 AVVEQHHDDNGIVWPLSVAPYEVIVVPAVFKSEEQMKEAEKLYTELKKIGVDALLDDRNE 507

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
               K ++  +  IP+ I  G K  SE  +  +   S   + + L   I  + +E
Sbjct: 508 RAGVKFKDADLIGIPMRITVGKK-ISEGKVEFKCRNSEEVEVIDLDKVIARVEEE 561


>gi|291242165|ref|XP_002740982.1| PREDICTED: prolyl-tRNA synthetase (mitochondrial)(putative)-like
           [Saccoglossus kowalevskii]
          Length = 443

 Score =  144 bits (363), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 67/386 (17%), Positives = 129/386 (33%), Gaps = 40/386 (10%)

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
               ++L  E  L  I +   GV        +  + LI  +  ++      +I+ P +  
Sbjct: 45  SCKSQRLMMEHGL--IRQSSPGVYHLLPLALRSLEKLIRLIDEEMHSIGGTKISMPCMTT 102

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPV 360
             LW+ +  W++    +F V+      +    + L P +      +     + S+++LP+
Sbjct: 103 SELWKATNRWETNGPELFKVED-----RHGIQYCLGPTHEEAVTDLIASQGRLSHKQLPL 157

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           R+ +    +R+E      GL+R R F   D + F    +   +  +  N         G 
Sbjct: 158 RIYQITRKFRDEKRPRF-GLLRGREFYMKDMYTFDANTENAIKTYEAVNQAYFSADT-GS 215

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
               +          G D LW           +     +   +   + +   +  G    
Sbjct: 216 IGGSMSHEYHLPADTGEDELW---------FCNRCGFGANKELG-DIDIEHCSHCGTTNS 265

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
             L+   G +       +       FNA Y +S+++     M      G   R +   IE
Sbjct: 266 --LESRQGIEV-GHAFYLGTKYSKVFNADYSDSNNQTRTTEM-GCYGLGVT-RILAAAIE 320

Query: 541 ----NFKGNLPLWLSPIQAIVTTITSSAVE---------YAQEIANLLKSHHLSIETDFR 587
               + +   P  L+P Q  +      + E            +I + L      I  D R
Sbjct: 321 VSSTDNEIRWPHLLAPYQIYIIPSKDGSKEAGAQPIAVGLYDQIVSHLPHLKHEIILDDR 380

Query: 588 NE-TINYKIREHSIKKIPIIIICGDK 612
           N  TI  +++E      P +I+ G K
Sbjct: 381 NHMTIGKRMKEAKSLGYPFVIVIGKK 406


>gi|254285550|ref|ZP_04960514.1| prolyl-tRNA synthetase [Vibrio cholerae AM-19226]
 gi|150424412|gb|EDN16349.1| prolyl-tRNA synthetase [Vibrio cholerae AM-19226]
          Length = 571

 Score =  144 bits (363), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 47/249 (18%), Positives = 95/249 (38%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R+
Sbjct: 3   TSKYLLSTLKETPNDAEVVSHKLMLRAGMIRKLA---SGLYTWLPTGLRVLRKVENIVRQ 59

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           +I      E   P V    LW+++G  +     +        T +  R F L P      
Sbjct: 60  EIDNAGAIETLMPVVQPFELWEETGRSEKMGPELLRF-----TDRHERPFVLSPTAEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
            A+  + + SY++LP+ L +  + +R+E      G+MR R F   DA+ F   +    + 
Sbjct: 115 TALVRNEVSSYKQLPLNLYQIQTKFRDERRPRF-GVMRAREFCMMDAYSFDIDKAGLEKS 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            + +H      +   G +   V   T      GS      AE+    +  + ++     I
Sbjct: 174 YEAMHVAYCKAFDRMGLDYRPVLADTGAIGGNGSHEFHVLAESGEDLIAFSTESDYAANI 233

Query: 464 NTGVLLGEG 472
                +   
Sbjct: 234 EKAEAVAPA 242



 Score = 86.0 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/166 (17%), Positives = 64/166 (38%), Gaps = 13/166 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           + R  + G I Q+  N   + N   ++S+ +    V++    +G  + R +   IE    
Sbjct: 405 LKRGIEVGHIFQLGTNYSEKMNCGVLDSNGKN---VILEMGCYGIGVSRVVAAAIEQNHD 461

Query: 545 N----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +     P  ++P Q  +  +    +    + A+++   L +  + +  D R E       
Sbjct: 462 DYGIIWPDAIAPFQVAIVPMNMHKSERVQQAAEKLYAELTAAGIEVLFDDRKERPGVMFS 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +  +  +P  II GD+   E     +   S   + V++   I  + 
Sbjct: 522 DMELIGVPHTIIIGDRSMDEGHFEYKNRRSGEKEAVAMASIIDFIQ 567


>gi|312966332|ref|ZP_07780558.1| prolyl-tRNA synthetase [Escherichia coli 2362-75]
 gi|312289575|gb|EFR17469.1| prolyl-tRNA synthetase [Escherichia coli 2362-75]
 gi|323190405|gb|EFZ75680.1| prolyl-tRNA synthetase [Escherichia coli RN587/1]
          Length = 547

 Score =  144 bits (363), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 46/218 (21%), Positives = 87/218 (39%), Gaps = 8/218 (3%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
            I +  SG+  W   G ++ + + + +R ++ +    E+  P V    LWQ+SG W+ Y 
Sbjct: 6   MIRKLASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVLMPVVQPSELWQESGRWEQYG 65

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
             +  +    D     R F L P +      +  + L SY++LP+   +  + +R+E   
Sbjct: 66  PELLRIADRGD-----RPFVLGPTHEEVITDLIRNELSSYKQLPLNFYQIQTKFRDEVRP 120

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              G+MR R F   DA+ F T ++   E    ++     I+   G +   V+  T     
Sbjct: 121 RF-GVMRSREFLMKDAYSFHTSQESLQETYDAMYAAYSKIFSRMGLDFRAVQADTGSIGG 179

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
             S      A++    V+ +  +     I     +   
Sbjct: 180 SASHEFQVLAQSGEDDVVFSDTSDYAANIELAEAIAPK 217



 Score = 86.0 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 59/178 (33%), Gaps = 13/178 (7%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
           P  +      I R  + G I Q+         A             ++    +G  + R 
Sbjct: 370 PSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDG---RNQILTMGCYGIGVTRV 426

Query: 535 IGIMIENFKGN----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDF 586
           +   IE          P  ++P Q  +  +         E A+++ + L++  + +  D 
Sbjct: 427 VAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLLDD 486

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R E       +  +  IP  I+ GD+      I  +   +   Q +   D +  L K+
Sbjct: 487 RKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVDYLVKQ 544


>gi|216263860|ref|ZP_03435854.1| prolyl-tRNA synthetase [Borrelia afzelii ACA-1]
 gi|215979904|gb|EEC20726.1| prolyl-tRNA synthetase [Borrelia afzelii ACA-1]
          Length = 488

 Score =  144 bits (363), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 75/431 (17%), Positives = 156/431 (36%), Gaps = 61/431 (14%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
           ++ ++   E+   + +  + ++  L   +     ++     G+ I+  + S + +K K+ 
Sbjct: 1   MSDFIASKEDDYSKWYLDIVQKAKLADYSPVKGCMVI-MPYGYSIWSKIQSILDKKFKET 59

Query: 290 DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
            +E    P ++     + +  H D +      +K A      +    L+P +      ++
Sbjct: 60  GHENAYFPMLIPYGFLEKEKDHIDGFSPEFAIIKDAGGESL-VEPLVLRPTSETIIWNMY 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
           +  +KSYR+LP+++ ++ +V R E        +R   F   + H   T      E L+  
Sbjct: 119 SKWIKSYRDLPLKINQWANVIRWEKR--TRPFLRTTEFLWQEGH---TAHATEEEALEET 173

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
            LI+ +YK F                          E+ +   +   K S  ++      
Sbjct: 174 LLILDVYKRF-------------------------MEDYLAIPVFCGKKSENEKF----- 203

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAV 527
              GA      E +++D   +  Q  T      N    F+  + +   +  H   +  + 
Sbjct: 204 --AGAVSTYSVEALMQD--KKALQAATSHYLGLNFAKAFDVKFQDKDGKMKH---VFASS 256

Query: 528 FGSIERFIGIMIENFKGN----LPLWLSPIQAIVTT-------ITSSAVEYAQEIANLLK 576
           +G   R IG +I          LP  ++P++ IV         I    ++Y+  + + LK
Sbjct: 257 WGVSTRLIGALIMVHSDEKGLILPPRIAPVEIIVIPIFKKEDEINKKILDYSDCVVHTLK 316

Query: 577 SHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT--TQKVS 633
                +E D     +  ++      K IPI I  G  +    S+ I R         ++S
Sbjct: 317 KAEFRVEIDKDVRSSPGFRFSSAEFKGIPIRIEVGINDILLNSVTIIRRDKDRKFKYQIS 376

Query: 634 LLDAIPILTKE 644
           L   +  +  E
Sbjct: 377 LDSLVSKVRVE 387


>gi|218768358|ref|YP_002342870.1| prolyl-tRNA synthetase [Neisseria meningitidis Z2491]
 gi|81857470|sp|Q9JU09|SYP_NEIMA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|121052366|emb|CAM08698.1| prolyl-tRNA synthetase [Neisseria meningitidis Z2491]
          Length = 570

 Score =  144 bits (363), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 48/223 (21%), Positives = 85/223 (38%), Gaps = 11/223 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       E+    H+ + R      I  + SG+  W   G ++ + + + +R 
Sbjct: 3   ASQFFISTLKEAPAEAALASHKLMIRAG---LIKANASGLYTWMPMGLRVLRKVENVVRE 59

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E+  P V    LWQ+SG W+ Y   +  +K   D     R F + P      
Sbjct: 60  EMARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHD-----RDFCMGPTCEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP       + +R+E      G+MR R F   DA+ F          
Sbjct: 115 ADIVRKEINSYKQLPKNFYHIQTKFRDEVRPRF-GVMRAREFVMKDAYSFHADYASLQTT 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
              +++    I+   G E   V   T      GS      AE+
Sbjct: 174 YDAMYDAYCRIFTRLGLEFRPVAADTGSIGGTGSHEFQVLAES 216



 Score = 81.0 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 62/171 (36%), Gaps = 12/171 (7%)

Query: 484 KDAIGRDWQCGTIQVDFNLPSR---FNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMI 539
            D  GR      I+V      R     A  V+         ++    +G  I R +   I
Sbjct: 395 PDGQGRLKLARGIEVGHVFQLRDKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAI 454

Query: 540 E-NFKGNLPLW---LSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           E N      +W   ++  + ++  +    + +  E A +I   L +    +  D R+E  
Sbjct: 455 EQNNDEKGIIWTKAMASFEVVIVPMNYKKSDTVREAADKIYAELLAAGADVLLDDRDERA 514

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
              + +  +  IP  I+ GD+   E ++          Q +++ + +  +T
Sbjct: 515 GVLLNDSELLGIPHRIVIGDRALKEGNVEYAERRDNEAQAIAIGEIVARVT 565


>gi|77918296|ref|YP_356111.1| prolyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
 gi|114152225|sp|Q3A6R6|SYP_PELCD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|77544379|gb|ABA87941.1| prolyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
          Length = 571

 Score =  144 bits (363), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 47/220 (21%), Positives = 85/220 (38%), Gaps = 11/220 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           T   L        ++E   H+ + R   +  +A    G+  +   G +  + +   +R +
Sbjct: 4   TDYLLPTLKETPSDAEVISHKLMLRAGMIRKLAA---GIYNYLPFGLRSIRKVEQIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P V+   LW++SG W+ Y   +       D       F L P +     
Sbjct: 61  MDRAGAMELLMPMVVPSELWEESGRWEHYGKELLRFTDRKDAS-----FCLGPTHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +  + ++SYR+LP+ L +    +R+E      GLMR R F   DA+ F   E   +   
Sbjct: 116 DLVRNTVRSYRQLPLNLYQIQGKFRDEIRPRF-GLMRGREFIMKDAYSFDIDEAGADVAY 174

Query: 406 -KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
            K++     I++  G +   V+  T       S      A
Sbjct: 175 EKMYQAYRRIFERCGLKFRAVEADTGNIGGSSSHEFMVLA 214



 Score = 83.3 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 62/171 (36%), Gaps = 9/171 (5%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPL 548
           R  + G +       S      V     +   + +     G + R +   IE       +
Sbjct: 403 RGIEVGHVFKLGTKYSAALGATVLDDQGQDRELFMGCYGIG-VGRTVAAAIEQNHDENGI 461

Query: 549 W----LSPIQAIVTTITSSAVEY---AQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
                ++P   +VT +     E    A+ +   L++  + +  D R+E    K ++  + 
Sbjct: 462 VFPMPIAPFHVLVTVVNPRQEEVLAAAENLYAELQALGVEVLLDDRDERPGSKFKDADLI 521

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
            IP+ +  G +   E ++ ++       + + L +A   L ++ +   C +
Sbjct: 522 GIPLRLTVGARGLKENAVELQERAGGERRMLPLAEA-AALVRDMVVEACGR 571


>gi|308389457|gb|ADO31777.1| prolyl-tRNA synthetase [Neisseria meningitidis alpha710]
 gi|325130423|gb|EGC53187.1| prolyl-tRNA synthetase [Neisseria meningitidis OX99.30304]
 gi|325201951|gb|ADY97405.1| prolyl-tRNA synthetase [Neisseria meningitidis M01-240149]
          Length = 570

 Score =  144 bits (363), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 49/275 (17%), Positives = 93/275 (33%), Gaps = 27/275 (9%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       E+    H+ + R      I  + SG+  W   G ++ + + + +R 
Sbjct: 3   ASQFFISTLKEAPAEAALASHKLMIRAG---LIKANASGLYTWMPMGLRVLRKVENVVRE 59

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E+  P V    LWQ+SG W+ Y   +  +K   D     R F + P      
Sbjct: 60  EMARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHD-----RDFCMGPTCEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP       + +R+E      G+MR R F   DA+ F          
Sbjct: 115 ADIVRKEINSYKQLPKNFYHIQTKFRDEVRPRF-GVMRAREFVMKDAYSFHADYASLQTT 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +++    I+   G     V   T      GS      AE+                 
Sbjct: 174 YDAMYDAYCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAESG---------------- 217

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
              +   + + Y    E      +  +      ++
Sbjct: 218 EDVIAYSDTSDYAANIELAPTLPLKGERTAAQAEL 252



 Score = 85.2 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 64/171 (37%), Gaps = 12/171 (7%)

Query: 484 KDAIGRDWQCGTIQVDFNLPSR---FNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMI 539
            D  GR      I+V      R     A  V+         ++    +G  I R +   I
Sbjct: 395 PDGQGRLKLARGIEVGHVFQLRDKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAI 454

Query: 540 E-NFKGNLPLW---LSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           E N      +W   ++P + ++  +    + +  E A +I   L +    +  D R+E  
Sbjct: 455 EQNNDEKGIIWTKAMAPFEVVIVPMNYKKSDTVREAADKIYAELLAAGADVLLDDRDERA 514

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
              + +  +  IP  I+ GD+   E ++      +   Q V++ + +  +T
Sbjct: 515 GVLLNDSELLGIPHRIVIGDRALKEGNVEYAERRNNEAQAVAIGEIVARVT 565


>gi|254805135|ref|YP_003083356.1| Prolyl-tRNA synthetase [Neisseria meningitidis alpha14]
 gi|254668677|emb|CBA06388.1| Prolyl-tRNA synthetase [Neisseria meningitidis alpha14]
          Length = 570

 Score =  144 bits (363), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 49/275 (17%), Positives = 93/275 (33%), Gaps = 27/275 (9%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       E+    H+ + R      I  + SG+  W   G ++ + + + +R 
Sbjct: 3   ASQFFISTLKEAPAEAALASHKLMIRAG---LIKANASGLYTWMPMGLRVLRKVENVVRE 59

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E+  P V    LWQ+SG W+ Y   +  +K   D     R F + P      
Sbjct: 60  EMARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHD-----RDFCMGPTCEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP       + +R+E      G+MR R F   DA+ F          
Sbjct: 115 ADIVRKEINSYKQLPKNFYHIQTKFRDEVRPRF-GVMRAREFVMKDAYSFHADYASLQTT 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +++    I+   G     V   T      GS      AE+                 
Sbjct: 174 YDAMYDAYCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAESG---------------- 217

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
              +   + + Y    E      +  +      ++
Sbjct: 218 EDVIAYSDTSDYAANIELAPTLPLKGERTAAQAEL 252



 Score = 85.2 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 64/171 (37%), Gaps = 12/171 (7%)

Query: 484 KDAIGRDWQCGTIQVDFNLPSR---FNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMI 539
            D  GR      I+V      R     A  V+         ++    +G  I R +   I
Sbjct: 395 PDGQGRLKLARGIEVGHVFQLRDKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAI 454

Query: 540 E-NFKGNLPLW---LSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           E N      +W   ++P + ++  +    + +  E A +I   L +    +  D R+E  
Sbjct: 455 EQNNDEKGIIWTKAMAPFEVVIVPMNYKKSDTVREAADKIYAELLAAGADVLLDDRDERA 514

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
              + +  +  IP  I+ GD+   E ++      +   Q V++ + +  +T
Sbjct: 515 GVLLNDSELLGIPHRIVIGDRALKEGNVEYAERRNNEAQAVAIGEIVARVT 565


>gi|156975521|ref|YP_001446428.1| prolyl-tRNA synthetase [Vibrio harveyi ATCC BAA-1116]
 gi|166980171|sp|A7N1W0|SYP_VIBHB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|156527115|gb|ABU72201.1| hypothetical protein VIBHAR_03253 [Vibrio harveyi ATCC BAA-1116]
          Length = 571

 Score =  144 bits (363), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 62/330 (18%), Positives = 115/330 (34%), Gaps = 17/330 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +   L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R+
Sbjct: 3   TSNYLLSTLKETPNDAEVVSHQLMLRAGMIRKLA---SGLYTWLPTGLRVLRKVENIVRQ 59

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           +I      E   P V    LW+++G  +     +        T +  R F L P      
Sbjct: 60  EIDNAGAVETLMPVVQPFELWEETGRSEKMGPELLRF-----TDRHTRPFVLSPTAEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
            ++  + + SY++LP+ L +  + +R+E      G+MR R F   DA+ F    E +   
Sbjct: 115 TSLVRNEVSSYKQLPLNLYQIQTKFRDERRPRF-GVMRAREFCMMDAYSFDIDKEGLEKS 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +H+     +   G E   V   +      GS      AE+    +  + ++     I
Sbjct: 174 YQAMHDAYCKAFDRMGLEYRPVLADSGAIGGSGSQEFHVLAESGEDLIAFSTESDYAANI 233

Query: 464 NTGVLLGEGAFYG-PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
                         P  E  L D          ++       +         S++    +
Sbjct: 234 EKAEAAAPAGERAEPTQEMTLVDTPNAKTIAELVEQHGLAIEKTVKTLFVKASDEVDADI 293

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
           I   V G  E     + E    NLP   SP
Sbjct: 294 IALIVRGDHE-----LNEVKAENLPQVASP 318



 Score = 86.8 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 60/168 (35%), Gaps = 13/168 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           + R  + G I Q+        N   +    +    V++    +G  + R +   IE    
Sbjct: 405 LKRGIEVGHIFQLGNVYSEAMNCGVLGPDGKN---VILEMGCYGIGVSRVVASAIEQNHD 461

Query: 545 N----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                 P  L+P Q  +  +    +    E A+++   L +  + +  D R E       
Sbjct: 462 KYGIIWPDALAPFQVAIVPMNMHKSEEVKEAAEKLYAELTAMGIEVLFDDRKERPGVMFS 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  +  IP  I+ GD+   E +   +   S     V++ D +  +  +
Sbjct: 522 DMELIGIPHTIVIGDRSMKEGNFEYKNRRSGEKTAVAMADIVEHVKAQ 569


>gi|255065704|ref|ZP_05317559.1| proline--tRNA ligase [Neisseria sicca ATCC 29256]
 gi|255050022|gb|EET45486.1| proline--tRNA ligase [Neisseria sicca ATCC 29256]
          Length = 570

 Score =  144 bits (363), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 48/223 (21%), Positives = 85/223 (38%), Gaps = 11/223 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       E+    H+ + R      I  + SG+  W   G ++ + + + +R 
Sbjct: 3   ASQFFISTLKEAPAEAALASHKLMIRAG---LIKANASGLYTWMPMGLRVLRKVENVVRE 59

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E+  P V    LWQ+SG W+ Y   +  +K   D     R F + P      
Sbjct: 60  EMARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHD-----RDFCMGPTCEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP       + +R+E      G+MR R F   DA+ F          
Sbjct: 115 ADIVRKEINSYKQLPKNFYHIQTKFRDEVRPRF-GVMRAREFVMKDAYSFHADYASLQTT 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
              +++    I+   G E   V   T      GS      AE+
Sbjct: 174 YDAMYDAYCRIFTRLGLEFRPVAADTGSIGGTGSHEFQVLAES 216



 Score = 84.8 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 32/165 (19%), Positives = 60/165 (36%), Gaps = 12/165 (7%)

Query: 484 KDAIGRDWQCGTIQVDFNLPSR---FNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMI 539
            D  GR      I+V      R     A  V+         ++    +G  I R +   I
Sbjct: 395 PDGQGRLKLARGIEVGHVFQLRDKYTKAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAI 454

Query: 540 E-NFKGNLPLW---LSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           E N      +W   ++P + ++  +    + +  + A +I   L +    +  D R+E  
Sbjct: 455 EQNNDEKGIIWTKAMAPFEVVIVPMNYKKSDAVRDAADKIYAELLAAGADVLLDDRDERA 514

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
              + +  +  IP  I+ GD+   E ++          Q VSL +
Sbjct: 515 GVLLNDSELLGIPHRIVIGDRALKEGNVEYAERRDNQAQTVSLNE 559


>gi|51598659|ref|YP_072847.1| prolyl-tRNA synthetase [Borrelia garinii PBi]
 gi|81825638|sp|Q661L6|SYP_BORGA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|51573230|gb|AAU07255.1| prolyl-tRNA synthetase [Borrelia garinii PBi]
          Length = 488

 Score =  144 bits (363), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 74/431 (17%), Positives = 155/431 (35%), Gaps = 61/431 (14%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
           ++ ++   E+   + +  + ++  L   +     ++     G+ I+  + S + +K K+ 
Sbjct: 1   MSDFIASKEDDYSKWYLDIVQKAKLADYSPVKGCMVI-MPYGYSIWSKIQSILDKKFKET 59

Query: 290 DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
            +E    P ++     + +  H + +      +K A           L+P +      ++
Sbjct: 60  GHENAYFPMLIPYGFLEKEKDHIEGFSPEFAIIKDAGGESL-AEPLVLRPTSETIIWNMY 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
           +  +KSYR+LP+++ ++ +V R E        +R   F   + H   T      E ++  
Sbjct: 119 SKWIKSYRDLPLKINQWANVVRWEKR--TRPFLRTTEFLWQEGH---TAHATEEEAVEET 173

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
            LI+ +YK F                          E+ +   +   K S +++      
Sbjct: 174 LLILDLYKRF-------------------------MEDYLAIPVFCGKKSEKEKF----- 203

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAV 527
              GA      E +++D   +  Q  T      N    F+  + +   +  H   +  + 
Sbjct: 204 --AGAVSTYSIEALMQD--KKALQAATSHYLGLNFAKAFDVKFQDKDGKMRH---VFASS 256

Query: 528 FGSIERFIGIMIENFKGN----LPLWLSPIQAIVTT-------ITSSAVEYAQEIANLLK 576
           +G   R IG +I          LP  ++PI+ IV         I    ++Y+  + + LK
Sbjct: 257 WGISTRLIGALIMVHSDEKGLILPPRIAPIEIIVIPIFKKEDEINKKILDYSDCVVHALK 316

Query: 577 SHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT--TQKVS 633
                +E D     +  ++      K IPI I  G  +    S+ I R         ++S
Sbjct: 317 KAEFRVEIDKDVRSSPGFRFSSAEFKGIPIRIEVGINDVLLNSVTIMRRDKDRKFKYQIS 376

Query: 634 LLDAIPILTKE 644
           L      +  E
Sbjct: 377 LDSLASKVKVE 387


>gi|153802043|ref|ZP_01956629.1| prolyl-tRNA synthetase [Vibrio cholerae MZO-3]
 gi|124122402|gb|EAY41145.1| prolyl-tRNA synthetase [Vibrio cholerae MZO-3]
          Length = 571

 Score =  144 bits (363), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 47/249 (18%), Positives = 95/249 (38%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R+
Sbjct: 3   TSKYLLSTLKETPNDAEVVSHKLMLRAGMIRKLA---SGLYTWLPTGLRVLRKVENIVRQ 59

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           +I      E   P V    LW+++G  +     +        T +  R F L P      
Sbjct: 60  EIDNAGAIETLMPVVQPFELWEETGRSEKMGPELLRF-----TDRHERPFVLSPTAEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
            A+  + + SY++LP+ L +  + +R+E      G+MR R F   DA+ F   +    + 
Sbjct: 115 TALVRNEVSSYKQLPLNLYQIQTKFRDERRPRF-GVMRAREFCMMDAYSFDIDKAGLEKS 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            + +H      +   G +   V   T      GS      AE+    +  + ++     I
Sbjct: 174 YEAMHVAYCKAFDRMGLDYRPVLADTGAIGGNGSHEFHVLAESGEDLIAFSTESDYAANI 233

Query: 464 NTGVLLGEG 472
                +   
Sbjct: 234 EKAEAVAPA 242



 Score = 86.0 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 28/166 (16%), Positives = 63/166 (37%), Gaps = 13/166 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           + R  + G I Q+  N   + N   ++S+ +    V++    +G  + R +   IE    
Sbjct: 405 LKRGIEVGHIFQLGTNYSEKMNCGVLDSNGKN---VILEMGCYGIGVSRVVAAAIEQNHD 461

Query: 545 N----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +     P  ++P Q  +  +    +    + A+++   L +  + +  D R E       
Sbjct: 462 DYGIIWPDAIAPFQVAIVPMNMHKSERVQQAAEKLYAELTAAGIEVLFDDRKERPGVMFS 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +  +  +P  II GD+   E     +       + V++   I  + 
Sbjct: 522 DMELIGVPHTIIIGDRSMDEGHFEYKNRRQGEKEAVAMESIIDFIQ 567


>gi|262065930|ref|ZP_06025542.1| proline--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
 gi|291380410|gb|EFE87928.1| proline--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
          Length = 567

 Score =  144 bits (363), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 54/246 (21%), Positives = 98/246 (39%), Gaps = 11/246 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  +       +E+E   H+ + R   +  +A   SG+  +   G++  + + + +R 
Sbjct: 3   FSKAYIKTLKETPKEAEIASHKLMLRAAMIKKLA---SGIYAYLPLGYRTIRKIENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LWQ+SG WD   A M  ++      +  R F L P      
Sbjct: 60  EMDRAGALELLMPVVQPAELWQESGRWDVMGAEMLRLQD-----RHERDFVLSPTQEEMI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
            ++    + SY+ LP+ L    + +R+E      GLMR R FT  D + F T  E +  E
Sbjct: 115 TSIVRSDISSYKSLPLNLYHIQTKFRDERRPRF-GLMRGREFTMKDGYSFHTSQESLDEE 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            L + +    I+   G +   V   +      GS      AE+    ++ +  +     I
Sbjct: 174 FLNMRDAYTRIFTRCGLKFRPVDADSGNIGGSGSQEFQVLAESGEDEIIYSDGSDYAANI 233

Query: 464 NTGVLL 469
              V  
Sbjct: 234 EKAVSE 239



 Score = 86.4 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 26/162 (16%), Positives = 67/162 (41%), Gaps = 9/162 (5%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  +CG I  +        NA Y++ + +  + +++     G        + +N   N  
Sbjct: 403 RGIECGQIFKLGDKYSKAMNATYLDENGKTQY-MLMGCYGIGVTRTMAAAIEQNNDENGI 461

Query: 548 LWLSPIQAIVTTI------TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W   I   +  +          V  A++I N L++ ++ +  D R+E   +K ++  + 
Sbjct: 462 IWPVSIAPYIVDVIPANIKNEGQVSLAEKIYNELQAENIDVMLDDRDEKPGFKFKDADLI 521

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             P  ++ G + A E  + ++   +  T +++  + +  + +
Sbjct: 522 GFPFKVVVGKR-ADEGIVEVKIRRTGETLELAQAEVVAKIKE 562


>gi|121635048|ref|YP_975293.1| prolyl-tRNA synthetase [Neisseria meningitidis FAM18]
 gi|152112936|sp|A1KUG4|SYP_NEIMF RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|120866754|emb|CAM10507.1| prolyl-tRNA synthetase [Neisseria meningitidis FAM18]
 gi|325138239|gb|EGC60808.1| prolyl-tRNA synthetase [Neisseria meningitidis ES14902]
          Length = 570

 Score =  144 bits (363), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 49/275 (17%), Positives = 93/275 (33%), Gaps = 27/275 (9%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       E+    H+ + R      I  + SG+  W   G ++ + + + +R 
Sbjct: 3   ASQFFISTLKEAPAEAALASHKLMIRAG---LIKANASGLYTWMPMGLRVLRKVENVVRE 59

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E+  P V    LWQ+SG W+ Y   +  +K   D     R F + P      
Sbjct: 60  EMARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHD-----RDFCMGPTCEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP       + +R+E      G+MR R F   DA+ F          
Sbjct: 115 ADIVRKEINSYKQLPKNFYHIQTKFRDEVRPRF-GVMRAREFVMKDAYSFHADYASLQTT 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +++    I+   G     V   T      GS      AE+                 
Sbjct: 174 YDAMYDAYCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAESG---------------- 217

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
              +   + + Y    E      +  +      ++
Sbjct: 218 EDVIAYSDTSDYAANIELAPTLPLKGERTAAQAEL 252



 Score = 85.6 bits (210), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 64/171 (37%), Gaps = 12/171 (7%)

Query: 484 KDAIGRDWQCGTIQVDFNLPSR---FNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMI 539
            D  GR      I+V      R     A  V+         ++    +G  I R +   I
Sbjct: 395 PDGQGRLKLARGIEVGHVFQLRDKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAI 454

Query: 540 E-NFKGNLPLW---LSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           E N      +W   ++P + ++  +    + +  E A +I   L +    +  D R+E  
Sbjct: 455 EQNNDEKGIIWTKAMAPFEVVIVPMNYKKSDAVREAADKIYAELLAAGADVLLDDRDERA 514

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
              + +  +  IP  I+ GD+   E ++      +   Q V++ + +  +T
Sbjct: 515 GVLLNDSELLGIPHRIVIGDRALKEGNVEYAERRNNEAQAVAIGEIVARVT 565


>gi|218710332|ref|YP_002417953.1| prolyl-tRNA synthetase [Vibrio splendidus LGP32]
 gi|254782926|sp|B7VIT2|SYP_VIBSL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|218323351|emb|CAV19528.1| prolyl-tRNA synthetase [Vibrio splendidus LGP32]
          Length = 571

 Score =  144 bits (363), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 49/248 (19%), Positives = 96/248 (38%), Gaps = 11/248 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +   L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R+
Sbjct: 3   TSNYLLSTLKETPNDAEVISHQLMLRAGMIRKLA---SGLYTWLPTGLRVLRKVENIVRQ 59

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           +I      EI  P V    LW+++G  +     +        T +  R F L P      
Sbjct: 60  EIDNAGAVEILMPVVQPFELWEETGRSEKMGPELLRF-----TDRHSRPFVLSPTAEEVV 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
            ++  + + SY++LP+ L +  + +R+E      G+MR R F+  DA+ F    E +   
Sbjct: 115 TSLVRNEISSYKQLPLNLYQIQTKFRDERRPRF-GVMRAREFSMMDAYSFDIDKEGLEKS 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +H+     +   G E   V   +      GS      AE+    +  + ++     I
Sbjct: 174 YQAMHDAYCKAFDRMGLEYRPVLADSGAIGGSGSQEFHVLAESGEDLIAFSSESDYAANI 233

Query: 464 NTGVLLGE 471
                L  
Sbjct: 234 EKAEALAP 241



 Score = 84.8 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 61/168 (36%), Gaps = 13/168 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           + R  + G I Q+        N   +    +    V++    +G  + R +   IE    
Sbjct: 405 LKRGIEVGHIFQLGNTYSKAMNCNVLGPDGKS---VILEMGCYGIGVSRVVASAIEQNHD 461

Query: 545 N----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                 P  L+P Q  +  +    +    E A+++   L +  + +  D R E      +
Sbjct: 462 KFGITWPDALAPFQVAIVPMNMHKSERVKEAAEKLYAELTAMGIEVLFDDRKERPGVMFK 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  +  IP  I+ GD+   E +   +   +   + +++   I  L  +
Sbjct: 522 DIELVGIPHTIVIGDRSMDEGNFEYKNRRTGDKEAIAMDTVIEHLKAQ 569


>gi|111115231|ref|YP_709849.1| prolyl-tRNA synthetase [Borrelia afzelii PKo]
 gi|123145721|sp|Q0SNA5|SYP_BORAP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|110890505|gb|ABH01673.1| prolyl-tRNA synthetase [Borrelia afzelii PKo]
          Length = 488

 Score =  144 bits (363), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 75/431 (17%), Positives = 156/431 (36%), Gaps = 61/431 (14%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
           ++ ++   E+   + +  + ++  L   +     ++     G+ I+  + S + +K K+ 
Sbjct: 1   MSDFIASKEDDYSKWYLDIVQKAKLADYSPVKGCMVI-MPYGYSIWSKIQSILDKKFKET 59

Query: 290 DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
            +E    P ++     + +  H D +      +K A      +    L+P +      ++
Sbjct: 60  GHENAYFPMLIPYGFLEKEKDHIDGFSPEFAIIKDAGGESL-VEPLVLRPTSETIIWNMY 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
           +  +KSYR+LP+++ ++ +V R E        +R   F   + H   T      E L+  
Sbjct: 119 SKWIKSYRDLPLKINQWANVIRWEKR--TRPFLRTTEFLWQEGH---TAHATEEEALEET 173

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
            LI+ +YK F                          E+ +   +   K S  ++      
Sbjct: 174 LLILDVYKRF-------------------------MEDYLAIPVFCGKKSENEKF----- 203

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAV 527
              GA      E +++D   +  Q  T      N    F+  + +   +  H   +  + 
Sbjct: 204 --AGAVSTYSVEALMQD--KKALQAATSHYLGLNFAKAFDVKFQDKDGKMKH---VFASS 256

Query: 528 FGSIERFIGIMIENFKGN----LPLWLSPIQAIVTT-------ITSSAVEYAQEIANLLK 576
           +G   R IG +I          LP  ++P++ IV         I    ++Y+  + + LK
Sbjct: 257 WGVSTRLIGALIMVHSDEKGLILPPRIAPVEIIVIPIFKKEDEINKKILDYSDCVVHTLK 316

Query: 577 SHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT--TQKVS 633
                +E D     +  ++      K IPI I  G  +    S+ I R         ++S
Sbjct: 317 KAEFRVEIDKDVRSSPGFRFSSAEFKGIPIRIEVGINDILLNSVTIIRRDKDRKFKYQIS 376

Query: 634 LLDAIPILTKE 644
           L   +  +  E
Sbjct: 377 LDSLVSKVRVE 387


>gi|283850295|ref|ZP_06367584.1| prolyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
 gi|283574321|gb|EFC22292.1| prolyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
          Length = 575

 Score =  144 bits (363), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 49/221 (22%), Positives = 83/221 (37%), Gaps = 11/221 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++           E+E   H+ L R   +  +    +G+  +   G +    +   +R +
Sbjct: 4   SRYYAPTLKESPAEAEVISHKLLLRAGMIRKL---TAGIYTYLPLGLRAVNNVARIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      EI  P V    LW++SG WD Y   +       D     R   L P +     
Sbjct: 61  MDRAGALEILMPAVQPADLWKESGRWDFYGRELLRFVDRHD-----RESCLGPTHEEVVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +  H ++SYR+LPV L +  + +R+E      GLMR R F   DA+ F   +   +   
Sbjct: 116 DLVRHEIRSYRQLPVNLYQVQTKFRDEIRPRF-GLMRGREFVMKDAYSFDKDDAGADASY 174

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
           K + +    I+   G +   V   +       S      AE
Sbjct: 175 KSMFDAYARIFTRLGLKFRAVSADSGAIGGSFSHEFMVLAE 215



 Score = 74.0 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 25/173 (14%), Positives = 60/173 (34%), Gaps = 14/173 (8%)

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           G   ++     +G  ++ G            +A +++   ++   +M    +   + R +
Sbjct: 396 GAALDFTKGIEVGHVFKLG-----LKYSKALSATFLDEAGKEQFMIMGCYGI--GVSRIV 448

Query: 536 GIMIENFKGN----LPLWLSPIQAIVTTITSS---AVEYAQEIANLLKSHHLSIETDFRN 588
              IE          P  ++P +A +  ++     A   A EI   L    +    D R+
Sbjct: 449 AACIEQNNDASGIVFPPPIAPFEAALINLSPKDETASAKADEIYAALTKAGVETLLDDRD 508

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           E    K ++  +  +PI +  G K  +   +  +   +    ++ L   +   
Sbjct: 509 ERPGVKFKDADLIGLPIQLTLGGKGLARGIVETKDRRTGEKGELPLEGFLEAF 561


>gi|325142550|gb|EGC64950.1| prolyl-tRNA synthetase [Neisseria meningitidis 961-5945]
 gi|325198486|gb|ADY93942.1| prolyl-tRNA synthetase [Neisseria meningitidis G2136]
          Length = 570

 Score =  144 bits (363), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 47/223 (21%), Positives = 84/223 (37%), Gaps = 11/223 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       E+    H+ + R      I  + SG+  W   G ++ + + + +R 
Sbjct: 3   ASQFFISTLKEAPAEAALASHKLMIRAG---LIKANASGLYTWMPMGLRVLRKVENVVRE 59

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E+  P V    LWQ+SG W+ Y   +  +K   D     R F + P      
Sbjct: 60  EMARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHD-----RDFCMGPTCEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP       + +R+E      G+MR R F   DA+ F          
Sbjct: 115 ADIVRKEINSYKQLPKNFYHIQTKFRDEVRPRF-GVMRAREFVMKDAYSFHADYASLQTT 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
              +++    I+   G     V   T      GS      AE+
Sbjct: 174 YDAMYDSYCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAES 216



 Score = 85.6 bits (210), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 64/171 (37%), Gaps = 12/171 (7%)

Query: 484 KDAIGRDWQCGTIQVDFNLPSR---FNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMI 539
            D  GR      I+V      R     A  V+         ++    +G  I R +   I
Sbjct: 395 PDGQGRLKLARGIEVGHVFQLRDKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAI 454

Query: 540 E-NFKGNLPLW---LSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           E N      +W   ++P + ++  +    + +  E A +I   L +    +  D R+E  
Sbjct: 455 EQNNDEKGIIWTKAMAPFEVVIVPMNYKKSDTVREAADKIYAELLAAGADVLLDDRDERA 514

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
              + +  +  IP  I+ GD+   E ++      +   Q V++ + +  +T
Sbjct: 515 GVLLNDSELLGIPHRIVIGDRALKEGNVEYAERRNNEAQAVAIGEIVARVT 565


>gi|312884352|ref|ZP_07744060.1| prolyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309367982|gb|EFP95526.1| prolyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 571

 Score =  144 bits (363), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 48/249 (19%), Positives = 95/249 (38%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +   L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R+
Sbjct: 3   TSNYLLSTLKETPNDAEVVSHQLMLRAGMIRKLA---SGLYTWLPSGLRVLRKVENIVRQ 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           +I +    E   P V    LW+++G  +   A +  +    D     R F L P      
Sbjct: 60  EINNAGAVETLMPVVQPFELWEETGRSEKMGAELLRLNDRHD-----RPFVLSPTAEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
            ++  + + SY++LP+ L +  + +R+E      G+MR R F+  DA+ F    + +   
Sbjct: 115 TSLVRNEVSSYKQLPLNLYQIQTKFRDERRPRF-GVMRSREFSMMDAYSFDIDKDGLQKS 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +H      +   G     V   T      GS      AE+    +  + ++     I
Sbjct: 174 YEAMHQAYCRAFDRMGLNYRPVLADTGAIGGNGSHEFHVLAESGEDLIAFSSESDYAANI 233

Query: 464 NTGVLLGEG 472
                L   
Sbjct: 234 EKAEALAPA 242



 Score = 86.0 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 25/168 (14%), Positives = 60/168 (35%), Gaps = 13/168 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           + R  + G I Q+  N   + N   +    +     ++    +G  + R +   IE    
Sbjct: 405 LKRGIEVGHIFQLGKNYSEKMNCGVLGPDGKN---TILEMGCYGIGVTRVVAAAIEQNHD 461

Query: 545 NLPLWL----SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
              + L    +P Q  +  +    +    + A+ +   L    + +  D R E       
Sbjct: 462 KFGISLPDAIAPFQVAIVPMNMHKSEEVQQAAENLYRELTDLGVEVLFDDRKERPGVMFS 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  +  IP  ++ GD+   E +   +   +   + +++ D +  L  +
Sbjct: 522 DMELIGIPHTVVIGDRSMKEGNFEYKNRRTGEKEAIAMADILGHLKNQ 569


>gi|167037133|ref|YP_001664711.1| phosphoribulokinase/uridine kinase [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|320115553|ref|YP_004185712.1| AAA ATPase [Thermoanaerobacter brockii subsp. finnii Ako-1]
 gi|166855967|gb|ABY94375.1| phosphoribulokinase/uridine kinase [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|319928644|gb|ADV79329.1| AAA ATPase [Thermoanaerobacter brockii subsp. finnii Ako-1]
          Length = 547

 Score =  144 bits (363), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 49/236 (20%), Positives = 90/236 (38%), Gaps = 3/236 (1%)

Query: 12  GSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSL 70
           G I  +P      D+A+          VA  +N ++ DL+  V ++ ++E +        
Sbjct: 7   GDIYEYPEGTKLEDIAKDFEHLYNGIIVAAKVNNELVDLNCTVSKDSTVEFVDTTIEEGT 66

Query: 71  AVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEII 130
            + R S   +  +AV+ + P   V I   +  G Y +       ++  ++ I+K+M+EII
Sbjct: 67  RIYRRSLTFVFIKAVKELLPGATVTIEHSLGKGLYCEIHG-YSLNNKIVSMIKKRMEEII 125

Query: 131 ARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRS 190
            +D    ++ L  E+A +LFE +    KV++ +    K+ V +Y      D    P V S
Sbjct: 126 EKDLKIERKMLPKEEAIKLFEKEGLTEKVKLFKD-TDKDKVPVYYCDGTVDFFYSPCVPS 184

Query: 191 TGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDH 246
           TG +K F       G            S            + +            +
Sbjct: 185 TGYLKVFDIRFYFPGVILIAPDVYNPRSLPVFVDVPKLASIFKEAEDWASILNISY 240


>gi|220906778|ref|YP_002482089.1| prolyl-tRNA synthetase [Cyanothece sp. PCC 7425]
 gi|254782895|sp|B8HNJ7|SYP_CYAP4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|219863389|gb|ACL43728.1| prolyl-tRNA synthetase [Cyanothece sp. PCC 7425]
          Length = 613

 Score =  144 bits (362), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 58/249 (23%), Positives = 96/249 (38%), Gaps = 8/249 (3%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q           E+E   H+ L R   +  I   GSGV  +    W++   +   +R++
Sbjct: 4   SQMLFVTLREDPAEAEIPSHKLLLRAGYIRRI---GSGVYAYLPLMWRVLGKVSQIVRQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E   PQ+    LWQ+SG WD+Y      +     T +  R   L P +     
Sbjct: 61  MNAAGAQECLLPQIQPAELWQESGRWDTYTKAEGIMFAL--TDRQDRQLGLGPTHEEVIT 118

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +    +++YR+LP  L +  + +R+E      GLMR R F   DA+ F    E +    
Sbjct: 119 TIARDLIRTYRQLPQNLYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSFDADVESLRVAY 177

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            K+H    +I +  G +   V   +      GS      A+     VL T        + 
Sbjct: 178 GKMHQAYCNILQRCGLKYRAVDADSGAIGGSGSQEFMVLADAGEDEVLYTEDGRYAANVE 237

Query: 465 TGVLLGEGA 473
             + L   A
Sbjct: 238 KAISLPVDA 246



 Score = 91.4 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 44/212 (20%), Positives = 84/212 (39%), Gaps = 17/212 (8%)

Query: 444 AENIMKGVLDTIKNSSQDRINTGVL------LGEGAFYGPKFEYILKDAIGRDWQCGTIQ 497
           A         T   S +  +  GV+       G+ A + P  E  LK A G +      Q
Sbjct: 399 ANWAEAKGKKTKAKSGEFALPDGVVDVRKARPGDRALHNP--EQTLKTARGIEI-GHIFQ 455

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL---SPIQ 554
           +         A Y N   E+  P+++     G        + +++  +  +W    +P Q
Sbjct: 456 LGTKYSQAMGATYTNEQGEEV-PLVMGCYGIGVSRLAQAAVEQSYDKDGIIWPVAIAPYQ 514

Query: 555 AIVTT---ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
           AIV       ++ VE A ++   L +  +    D RNE    K ++  +  IP  I+ G 
Sbjct: 515 AIVVIPNLNETTQVEAATQLYQDLNAAGIETLLDDRNERAGVKFKDADLIGIPYRIVTG- 573

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  ++  + + +  S ++ +++L   IP L +
Sbjct: 574 RSLAQGKVEVVQRASRSSTEIALDQVIPTLKE 605


>gi|212636240|ref|YP_002312765.1| prolyl-tRNA synthetase [Shewanella piezotolerans WP3]
 gi|212557724|gb|ACJ30178.1| Prolyl-tRNA synthetase, bacterial [Shewanella piezotolerans WP3]
          Length = 596

 Score =  144 bits (362), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 46/245 (18%), Positives = 90/245 (36%), Gaps = 11/245 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  L+        +E   H+ + R   +     + SG+  W   G ++ + + + +R +
Sbjct: 30  SKYLLSTQKETPANAEVISHQLMLRAGMIR---RNASGLYSWLPTGLRVLRKIEAIVREE 86

Query: 287 IK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      EI  P V    LWQ++G +D +   +   +      +  R F L P +     
Sbjct: 87  MNKAGSVEILMPMVQPADLWQETGRFDKFGPELLRFQD-----RHNRDFVLGPTHEEVIT 141

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNEC 404
            +    + SY++LP+ L +  + +R+E      G+MR R F   DA+ F   +E M    
Sbjct: 142 DIVRKEVNSYKQLPLNLYQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHLEQECMDETY 200

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
             +     +I    G     V   T       S      A +    +  + ++     I 
Sbjct: 201 EAMFQAYNNILTRLGLSFRPVMADTGSIGGSLSHEFHVLANSGEDLIAYSTESDYAANIE 260

Query: 465 TGVLL 469
                
Sbjct: 261 KCEAP 265



 Score = 84.4 bits (207), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 23/167 (13%), Positives = 58/167 (34%), Gaps = 9/167 (5%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           A+ R  + G I Q+  N     +A  ++ + +    +++     G        + +N   
Sbjct: 429 ALLRGIEVGHIFQLGSNYSEAMHANVLDQNGKSKT-LLMGCYGVGVSRMVAAAIEQNHDD 487

Query: 545 NLPLWL---SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
              +W    +P Q  +  +    +    + A+++   L    + +  D R E       +
Sbjct: 488 RGIIWPEAIAPFQVGILPMNMHKSHRVKDMAEQLYQDLTDAGMEVLFDDRKERAGVMFAD 547

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
             +  +P +++ GD+         +   +   Q V     +  L  +
Sbjct: 548 MELVGLPNVVVIGDRNIDNGVFEYKNRRTGEKQDVPFDQIVEFLKAQ 594


>gi|254382091|ref|ZP_04997453.1| prolyl-tRNA synthetase 1 [Streptomyces sp. Mg1]
 gi|194340998|gb|EDX21964.1| prolyl-tRNA synthetase 1 [Streptomyces sp. Mg1]
          Length = 565

 Score =  144 bits (362), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 56/325 (17%), Positives = 114/325 (35%), Gaps = 21/325 (6%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++           ++E   H+ L R   +       +GV  W   G ++   +   +R +
Sbjct: 10  SRLMAKTLREDPADAETLSHKLLVRAGYVR---RSSAGVWTWLPLGKRVLDNVSRVVREE 66

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E+  P +L +  ++ SG W  Y   +F +K      +    + L P +     
Sbjct: 67  MDAIGAQEVLLPALLPKEPYEVSGRWSEYGDLLFRLKD-----RKGADYLLGPTHEEIFT 121

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            V      SY++LPV L +  + YR+E      G++R R F   D++ F   ++   E  
Sbjct: 122 LVVKDQCTSYKDLPVMLYQIQTKYRDEARPR-SGVLRGREFQMKDSYSFDVSDEGLAESY 180

Query: 406 KIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA---ENIMKGVLDTIKNSSQD 461
            +H      I++  G +  +V   +       S+     A   E+           ++ +
Sbjct: 181 ALHRAAYRRIFERLGLDHRIVSAVSGAMGGSASEEFLAPAAAGEDTFVDCPSCDYAANTE 240

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
            +       +GA + P  E    D      +     +     +      V    E     
Sbjct: 241 AVTFAAPAVDGAGHAPAQEIPTPDT--PTIEALAAHLGVPASATLKNLLVKVDGE----- 293

Query: 522 MIHRAVFGSIERFIGIMIENFKGNL 546
           ++   V G  E  +G + E+    +
Sbjct: 294 IVAVGVPGDREVDLGKLGEHLAPAV 318



 Score = 67.1 bits (162), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 62/163 (38%), Gaps = 10/163 (6%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           + R  + G I Q+       F    +    +     M    +   + R +  + E     
Sbjct: 406 LDRAIEIGHIFQLGRKYADAFGLDVLGREGKPVRVTMGSYGI--GVSRAVAALAEQTADE 463

Query: 546 ----LPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFR-NETINYKIREHS 599
                P  ++P    V     +  +  A+  A  L +  L +  D R   +   K+ +  
Sbjct: 464 RGLCWPAEVAPADVHVVAAGKAVPLALAESAAAALSASGLRVLLDDRAGLSPGVKLTDAE 523

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +  +P I++ G + + +  + ++   + T ++++L +A+  LT
Sbjct: 524 LIGVPWILVAGRR-SGDGVVELQHRPTGTREELTLDEALARLT 565


>gi|224531964|ref|ZP_03672596.1| prolyl-tRNA synthetase [Borrelia valaisiana VS116]
 gi|224511429|gb|EEF81835.1| prolyl-tRNA synthetase [Borrelia valaisiana VS116]
          Length = 488

 Score =  144 bits (362), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 73/419 (17%), Positives = 150/419 (35%), Gaps = 61/419 (14%)

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
            + +  + ++  L   +     ++     G+ I+  + S + +K K+  +E    P ++ 
Sbjct: 13  SKWYLDIVQKAKLADYSPVKGCMVI-MPYGYSIWSKIQSILDKKFKETGHENAYFPMLIP 71

Query: 302 QHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
               + +  H D +      +K A      +    L+P +      +++  +KSYR+LP+
Sbjct: 72  YGFLEKEKDHIDGFSPEFAIIKNAGGESL-MEPLVLRPTSETIIWNMYSKWIKSYRDLPL 130

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           ++ ++ +V R E        +R   F   + H   T      E L+   LI+ +YK F  
Sbjct: 131 KINQWANVIRWEKR--TRPFLRTTEFLWQEGH---TAHATEEEALEETLLILDVYKRF-- 183

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
                                   E+ +   +   K S +++         GA      E
Sbjct: 184 -----------------------MEDYLAIPVFCGKKSEKEKF-------AGAVSTYSIE 213

Query: 481 YILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
            +++D   +  Q  T      N    F+  + +   +  H   +  + +G   R IG +I
Sbjct: 214 ALMQD--KKALQAATSHYLGLNFAKAFDVKFQDKDGKMKH---VFASSWGVSTRLIGALI 268

Query: 540 ENFKGN----LPLWLSPIQAIVTT-------ITSSAVEYAQEIANLLKSHHLSIETDFR- 587
                     LP  ++PI+ IV         I    ++Y+  +  +LK     +E D   
Sbjct: 269 MVHSDEKGLILPPRIAPIEIIVIPIFKKEDEINKKILDYSDCVMQILKKAEFRVEIDKDI 328

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT--TQKVSLLDAIPILTKE 644
             +  ++      K IPI +  G  +    S+ + R         ++SL      +  E
Sbjct: 329 RSSPGFRFSSAEFKGIPIRLEVGINDILLNSVTLVRRDKEKKFKYQISLDSLASKVKVE 387


>gi|322831614|ref|YP_004211641.1| prolyl-tRNA synthetase [Rahnella sp. Y9602]
 gi|321166815|gb|ADW72514.1| prolyl-tRNA synthetase [Rahnella sp. Y9602]
          Length = 572

 Score =  144 bits (362), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 50/244 (20%), Positives = 98/244 (40%), Gaps = 11/244 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            TQ  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TTQYLLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGLRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ + +  E++ P V    LWQ+SG W+ Y   +       +     R F L P +    
Sbjct: 60  EMNNANAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGE-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + + SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLIRNEVSSYKQLPLNFFQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHTTQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   G +   V   T       S      A++    V+ +  +     I
Sbjct: 174 YDAMYAAYSQIFNRMGLDFRAVLADTGSIGGSASHEFQVLAQSGEDDVVFSDSSDFAANI 233

Query: 464 NTGV 467
               
Sbjct: 234 EFAE 237



 Score = 87.5 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 28/178 (15%), Positives = 59/178 (33%), Gaps = 13/178 (7%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
           P  +      I R  + G I Q+        NA             ++    +G  + R 
Sbjct: 395 PSPDGQGTLVIKRGIEVGHIFQLGTKYSEAMNATVQGEDG---RNQLMTMGCYGIGVTRV 451

Query: 535 IGIMIENFKGN----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDF 586
           +   IE    +     P  ++P Q  +  +         + A+ +   L+SH + +  D 
Sbjct: 452 VAAAIEQNHDDRGIIWPDAIAPFQVAILPMNMHKSFRVKDAAEALYKELRSHGIDVILDD 511

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R E       +  +  +P  ++ GD+      +  +   +   Q +   D +  L  +
Sbjct: 512 RKERPGVMFADMELIGVPHQVVIGDRNLDAEELEYKNRRTGEKQMIKQSDIVEYLLSQ 569


>gi|149190039|ref|ZP_01868316.1| prolyl-tRNA synthetase [Vibrio shilonii AK1]
 gi|148836069|gb|EDL53029.1| prolyl-tRNA synthetase [Vibrio shilonii AK1]
          Length = 571

 Score =  144 bits (362), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 48/249 (19%), Positives = 95/249 (38%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +   L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R+
Sbjct: 3   TSNYLLSTLKETPNDAEVVSHQLMLRAGMIRKLA---SGLYTWLPTGLRVLRKVENIVRQ 59

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           +I      E   P V    LW+++G  +   A +        T +  R F L P      
Sbjct: 60  EIDNAGAVETLMPVVQPFELWEETGRSEKMGAELLRF-----TDRHTRPFVLSPTAEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
            ++  + + SY++LP+ L +  + +R+E      G+MR R F+  DA+ F    E +   
Sbjct: 115 TSLVRNEVSSYKQLPLNLYQIQTKFRDERRPRF-GVMRAREFSMMDAYSFDIDKEGLEKS 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +H      +   G +   V   T      GS      AE+    +  + ++     I
Sbjct: 174 YQAMHEAYCKAFDRMGLDYRPVLADTGAIGGNGSHEFHVLAESGEDLIAFSSESDYAANI 233

Query: 464 NTGVLLGEG 472
                +   
Sbjct: 234 EKAEAVAPA 242



 Score = 84.4 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 27/168 (16%), Positives = 61/168 (36%), Gaps = 13/168 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           + R  + G I Q+  N   + N   +    +     ++    +G  + R +   IE    
Sbjct: 405 LKRGIEVGHIFQLGKNYSEKMNCGVLGPDGKN---TILEMGCYGIGVSRVVASAIEQNND 461

Query: 545 N----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                 P  ++P Q  +  +    +    E A+++   L +  + +  D R E       
Sbjct: 462 KYGIIWPDAIAPFQVAIVPMNMHKSERVKEAAEKLYAELTAAGIEVLFDDRKERPGVMFS 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  +  IP  I+ GD+   E +   +   +     V++   +  +T +
Sbjct: 522 DIELIGIPHTIVIGDRSMDEGNFEYKNRRTGDKTPVAMEQIVAHVTSQ 569


>gi|167763729|ref|ZP_02435856.1| hypothetical protein BACSTE_02107 [Bacteroides stercoris ATCC
           43183]
 gi|167697845|gb|EDS14424.1| hypothetical protein BACSTE_02107 [Bacteroides stercoris ATCC
           43183]
          Length = 557

 Score =  144 bits (362), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 48/241 (19%), Positives = 100/241 (41%), Gaps = 3/241 (1%)

Query: 1   MPSDIKLTFPDGSI-KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-S 58
           M   +++   + +I K FP+ ++  D+    + +   + V+  +N +   L+  V     
Sbjct: 1   MKHMLQICCKNNNIYKEFPIGSSLLDIYYGFNLNFPYQVVSAKVNNRSEGLNFRVYNNKD 60

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           +E +   D   +     S   I+ +AV  ++PE ++ +   +  G++ +    +P   ++
Sbjct: 61  VEFLDVRDSSGMRTYVRSLCFILYKAVSELFPEGKLFVEHPVSKGYFCNLRIGRPIELED 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           ++ I+K+MQEIIA D PF +      +A  +F  +    KV++LE+         Y  G+
Sbjct: 121 VSAIKKRMQEIIAEDIPFRRTECHTTEAVRVFSERGMNDKVKLLET-SGSIYTYYYTLGD 179

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             D   G  + STG +K F  +    G   R  +                 ++ +     
Sbjct: 180 TVDYYYGNLLPSTGFIKLFDIVKYYDGLLLRIPNKENPTVLEEVVKQEKMLDVFKEHLHW 239

Query: 239 E 239
            
Sbjct: 240 N 240


>gi|15677205|ref|NP_274358.1| prolyl-tRNA synthetase [Neisseria meningitidis MC58]
 gi|81857571|sp|Q9JZ14|SYP_NEIMB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|7226583|gb|AAF41714.1| prolyl-tRNA synthetase [Neisseria meningitidis MC58]
 gi|325134423|gb|EGC57068.1| prolyl-tRNA synthetase [Neisseria meningitidis M13399]
 gi|325200038|gb|ADY95493.1| prolyl-tRNA synthetase [Neisseria meningitidis H44/76]
          Length = 570

 Score =  144 bits (362), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 47/223 (21%), Positives = 85/223 (38%), Gaps = 11/223 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       E+    H+ + R      I  + SG+  W   G ++ + + + +R 
Sbjct: 3   ASQFFISTLKEAPAEAALASHKLMIRAG---LIKANASGLYTWMPMGLRVLRKVENVVRE 59

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E+  P V    LWQ+SG W+ Y   +  +K   D     R F + P      
Sbjct: 60  EMARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHD-----RDFCMGPTCEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP       + +R+E      G+MR R F   DA+ F          
Sbjct: 115 ADIVRKEINSYKQLPKNFYHIQTKFRDEVRPRF-GVMRAREFVMKDAYSFHADYASLQTT 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
            + +++    I+   G     V   T      GS      AE+
Sbjct: 174 YQDMYDAYCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAES 216



 Score = 84.4 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 63/171 (36%), Gaps = 12/171 (7%)

Query: 484 KDAIGRDWQCGTIQVDFNLPSR---FNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMI 539
            D  GR      I+V      R     A  V+         ++    +G  I R +   I
Sbjct: 395 PDGQGRLKLARGIEVGHVFQLRDKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAI 454

Query: 540 E-NFKGNLPLW---LSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           E N      +W   ++P + ++  +    + +  E A +I   L +    +  D R+E  
Sbjct: 455 EQNNDEKGIIWTKAMAPFEVVIVPMNYKKSDTVREAADKIYAELLAAGADVLLDDRDERA 514

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
              + +  +  IP  I+ GD+   E ++          Q V++ + +  +T
Sbjct: 515 GVLLNDSELLGIPHRIVIGDRALKEGNVEYAERRDNEAQAVAIGEIVARVT 565


>gi|328861801|gb|EGG10903.1| hypothetical protein MELLADRAFT_74104 [Melampsora larici-populina
           98AG31]
          Length = 488

 Score =  144 bits (362), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 67/398 (16%), Positives = 134/398 (33%), Gaps = 70/398 (17%)

Query: 281 SYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKP 338
           ++   +IK    E    P  +   + + +  H + +   +  V  A  +  +    A++P
Sbjct: 23  NWFDERIKALGVENAYFPMFVSSRVLEREKDHIEGFAPEVAWVTRAGKSELE-EHIAIRP 81

Query: 339 MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTK 397
            +       +   ++SYR+LP+++ ++ SV R E        +R R F   + H    TK
Sbjct: 82  TSETVMYPYYAKWIQSYRDLPLKINQWNSVVRWEFKNP-QPFIRTREFLWQEGHTAHLTK 140

Query: 398 EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKN 457
            +   E  +I +L   +Y++                                     +  
Sbjct: 141 PEADTEVRQILDLYKGVYEEL------------------------------------LAV 164

Query: 458 SSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSH-- 514
                I +      G  Y    E  +  + GR  Q  T   +  N    FN    +    
Sbjct: 165 PVTPGIKSEKEKFAGGLYTTTVEGFIPTS-GRGIQGATSHCLGQNFSKMFNISVEDPAKP 223

Query: 515 -----SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI----QAIVTTIT---- 561
                  +   + + +  +G   R IG+M+     +  L L P     Q IV  +     
Sbjct: 224 VDSKLGVQAEKLFVWQNSWGLSTRTIGVMVMVHGDDKGLVLPPRVAQLQVIVIPVGIVAS 283

Query: 562 ------SSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEA 614
                     +  +E+A  L+   +  ++D R   T  +K     +K IP+ +  G K+ 
Sbjct: 284 TTQEGRKELYDKTEELAARLRKAGVRAKSDLREGYTPGWKFNSWEMKGIPLRLELGPKDL 343

Query: 615 SERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           + ++  + R  +      SL         E +P   ++
Sbjct: 344 ANQTTLVVRRDTGIKTPFSLDKL-----DEEIPELLER 376


>gi|325205891|gb|ADZ01344.1| prolyl-tRNA synthetase [Neisseria meningitidis M04-240196]
          Length = 570

 Score =  144 bits (362), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 47/223 (21%), Positives = 84/223 (37%), Gaps = 11/223 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       E+    H+ + R      I  + SG+  W   G ++ + + + +R 
Sbjct: 3   ASQFFISTLKEAPAEAALASHKLMIRAG---LIKANASGLYTWMPMGLRVLRKVENVVRE 59

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E+  P V    LWQ+SG W+ Y   +  +K   D     R F + P      
Sbjct: 60  EMARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHD-----RDFCMGPTCEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP       + +R+E      G+MR R F   DA+ F          
Sbjct: 115 ADIVRKEINSYKQLPKNFYHIQTKFRDEVRPRF-GVMRAREFVMKDAYSFHADYASLQTT 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
              +++    I+   G     V   T      GS      AE+
Sbjct: 174 YDAMYDAYCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAES 216



 Score = 85.2 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 64/171 (37%), Gaps = 12/171 (7%)

Query: 484 KDAIGRDWQCGTIQVDFNLPSR---FNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMI 539
            D  GR      I+V      R     A  V+         ++    +G  I R +   I
Sbjct: 395 PDGQGRLKLARGIEVGHVFQLRDKYTQAMNVSFLDNNGKSQVMEMGCYGIGITRVVAAAI 454

Query: 540 E-NFKGNLPLW---LSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           E N      +W   ++P + ++  +    + +  E A +I   L +    +  D R+E  
Sbjct: 455 EQNNDEKGIIWTKAMAPFEVVIVPMNYKKSDTVREAADKIYAELLAAGADVLLDDRDERA 514

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
              + +  +  IP  I+ GD+   E ++      +   Q V++ + +  +T
Sbjct: 515 GVLLNDSELLGIPHRIVIGDRALKEGNVEYAERRNNEAQAVAIGEIVARVT 565


>gi|317154070|ref|YP_004122118.1| prolyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
 gi|316944321|gb|ADU63372.1| prolyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
          Length = 579

 Score =  144 bits (362), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 44/218 (20%), Positives = 83/218 (38%), Gaps = 14/218 (6%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++E   H+ L R   +  +    SG+  +   G +    +   +R +
Sbjct: 4   SRYYIPTLKEDPADAEVVSHKLLMRAGMIRKL---TSGIYNYLPLGLRSINKVARIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E++ P V    LWQ++G WD Y   +  +K      +  R + L P +     
Sbjct: 61  MDRAGAMEVSMPMVQPADLWQETGRWDYYGKELLRLKD-----RHGRDYCLGPTHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQ-MFNEC 404
            +    +KSY++LP+ L +  + +R+E      GLMR R F   DA+ F   E       
Sbjct: 116 DLVRGEIKSYKQLPINLYQVQTKFRDEIRPRF-GLMRGREFIMKDAYSFDRDEAGAETSY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWD 442
             +     + +   G      K        +G D   +
Sbjct: 175 WAMFEAYKAAFSRIGL---RFKPVQADSGAIGGDFSHE 209



 Score = 76.0 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/174 (14%), Positives = 62/174 (35%), Gaps = 14/174 (8%)

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           G + E+     +G  ++ G          +  A +++ + +  + VM    +   + R +
Sbjct: 399 GSEIEFTKGIEVGHVFKLG-----LKYSKKMEATFLDENGKTQYMVMGCYGI--GVSRIV 451

Query: 536 GIMIENFKGN----LPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRN 588
              IE          P  ++P +A++ ++     +    A E+   L+   +    D R 
Sbjct: 452 ASAIEQNNDEAGCCFPPSIAPFEAVLISLGGKDEAVDAKAAELYEQLRVLGVDACFDDRK 511

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           E    K  E  +   P+ ++ G K  +   +  +   +    ++ +       T
Sbjct: 512 ERPGVKFAEADLIGYPMQLVLGGKGLASGIVEAKDRKTGEKIELPINGFAEAFT 565


>gi|149927159|ref|ZP_01915416.1| prolyl-tRNA synthetase [Limnobacter sp. MED105]
 gi|149824098|gb|EDM83319.1| prolyl-tRNA synthetase [Limnobacter sp. MED105]
          Length = 586

 Score =  144 bits (362), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 50/221 (22%), Positives = 87/221 (39%), Gaps = 11/221 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            TQ  L        ++E   H+ + R   +  +A    G+  +   G +  + + + +R 
Sbjct: 3   ATQFFLNTLKEAPADAEVISHQLMMRAGMIKRLA---GGIYTYMPVGLRSIRKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LWQ+SG W+ Y   +  +K   D     R + + P +    
Sbjct: 60  EMNRAGALELLMPAVQPAELWQESGRWEKYGPELLRMKDRHD-----RDYVIGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNE 403
             V    +KSYR+LP+ L +  + +R+E      G+MR R F   DA+ F  T+E     
Sbjct: 115 TDVVRKEVKSYRQLPLNLYQIQTKFRDEIRPRF-GVMRGREFVMKDAYSFDRTQEAALKT 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
              +++    I+   G     V   T       S      A
Sbjct: 174 YDVMYDAYRRIFTRLGLNFRAVNADTGSIGGNRSHEFHVIA 214



 Score = 86.4 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 60/174 (34%), Gaps = 13/174 (7%)

Query: 484 KDAIGRDWQCGTIQVDFNLP---SRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMI 539
            D  G    C  I+V            A       E   P +I    +G  + R +G  I
Sbjct: 405 PDGKGVLAMCRGIEVGHVFYLGTKYSEALQAKFLEENGKPAVIEMGCYGIGVTRILGAAI 464

Query: 540 E----NFKGNLPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           E    +     PL ++P + ++  I    +      A ++  +LK   + +  D R+E  
Sbjct: 465 EQNFDDRGIIWPLSIAPFEVVLCPIGYKKSDEVKAQADKLYQMLKDAGVDVMLDDRDERP 524

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGST-TTQKVSLLDAIPILTKE 644
                +  +  +P+ +  GD+   E  +  +        + V + +    L  E
Sbjct: 525 GVMFADWELIGVPLRVTLGDRGLKEGKVEFQSRDGKVEKRDVEVGEIFEQLCVE 578


>gi|312898748|ref|ZP_07758137.1| prolyl-tRNA synthetase [Megasphaera micronuciformis F0359]
 gi|310620179|gb|EFQ03750.1| prolyl-tRNA synthetase [Megasphaera micronuciformis F0359]
          Length = 574

 Score =  144 bits (362), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 51/244 (20%), Positives = 97/244 (39%), Gaps = 11/244 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++           E++   H+ + +   L    ++ +G+  +   G K+   + + +R+
Sbjct: 3   ASKLYAPTLRDDPAEADVASHKLMLKAGMLR---KNAAGLYSFLPLGRKVCLKVENIIRK 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +E+  P V    +W+++G WD Y   MF +K   D       + L P +    
Sbjct: 60  EMNRSGAQEVMMPIVQPAEIWRETGRWDVYGPEMFKLKDRHDN-----EYCLGPTHEELI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
             +  + L+SY++LPV L +  + YR+E      GLMR R F   DA+ F    E M   
Sbjct: 115 TTLVRNELRSYKQLPVNLWQMQNKYRDEIRPRF-GLMRSREFVMKDAYSFDVDREGMIKS 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +++    I+ + G E   V   +       S      A+     V+   K      +
Sbjct: 174 YESMYDAYSRIFTECGIEYRPVLADSGQIGGNYSHEFMALAKAGEADVVICTKCGFAANV 233

Query: 464 NTGV 467
              V
Sbjct: 234 EKAV 237



 Score = 68.7 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 66/162 (40%), Gaps = 12/162 (7%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPI 553
           +        NA +++    K  P ++     G   R +   IE    +     P+  +P 
Sbjct: 415 LGTKYSESLNATFLDKDG-KAKPFVMGCYGIGVT-RTVAATIEQLHDDKGIIWPVATAPF 472

Query: 554 QAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           +A+V  +     + V  A+++ + L    + +  D R+E    K  +  +   P+ +  G
Sbjct: 473 EAVVLPVNMKDEAIVSVAKKLYDELLDLDVDVLLDDRDERAGVKFNDADLIGYPVRLTVG 532

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
            K A++  + ++   +   ++V++  A   + +  L  D +K
Sbjct: 533 SK-AADGKVEVKIRRTDEEEEVTIEGAAEHVAR--LLRDLRK 571


>gi|302542146|ref|ZP_07294488.1| proline-tRNA ligase [Streptomyces hygroscopicus ATCC 53653]
 gi|302459764|gb|EFL22857.1| proline-tRNA ligase [Streptomyces himastatinicus ATCC 53653]
          Length = 569

 Score =  144 bits (362), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 60/320 (18%), Positives = 118/320 (36%), Gaps = 21/320 (6%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
            L        ++E   H+ L R   +       +G+  W   G K+ + +   +R ++  
Sbjct: 14  MLKTLREDPADAETASHKLLVRAGYVR---RASAGIWTWLPVGKKVLENVSRIVREEMDA 70

Query: 290 -DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
              +E+  P +L +  ++ SG W+ Y   +F +K      +    + L P +        
Sbjct: 71  IGAQEVLLPALLPKEPYEASGRWEEYGDLLFRLKD-----RKGGDYLLGPTHEEIFTQTV 125

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
                SY++LPV L +  + YR+E      G++R R F   D++ F T ++   E  ++H
Sbjct: 126 KDQCTSYKDLPVMLYQIQTKYRDEARPR-SGVLRGREFQMKDSYSFDTSDEGLAESYRLH 184

Query: 409 N-LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA---ENIMKGVLDTIKNSSQDRIN 464
                 I++  G +  +V   +       S+     A   E+      +    ++ + + 
Sbjct: 185 REAYQRIFERLGLDYRIVSAVSGAMGGSASEEFLAPAAAGEDTFVDCPNCDYAANTEAVT 244

Query: 465 TGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIH 524
           T V   EGA +GP  E    D      +     +     +      +    E     +  
Sbjct: 245 TAVPAVEGAEHGPVEELDTPDT--PTIETLAEHLGVPASATLKNLLIKVDGE-----ITA 297

Query: 525 RAVFGSIERFIGIMIENFKG 544
             V G  E  +G + E+   
Sbjct: 298 VGVPGDREVDLGKLGEHLAP 317



 Score = 88.7 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 63/164 (38%), Gaps = 10/164 (6%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE---- 540
           A+ R  + G I Q+       F    +  + +     M    +   + R +  + E    
Sbjct: 408 ALDRAIEIGHIFQLGRKYADTFQLDVLGQNGKPVRVTMGSYGI--GVSRVVAALAEQTFD 465

Query: 541 NFKGNLPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREH 598
           +     P  ++P    +     +   E A ++A  L +  + +  D R   +   K  + 
Sbjct: 466 DSGLCWPREVAPADVHIVAAGKALQTELALDLAEKLGTAGVRVMVDDRAGVSPGVKFTDA 525

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +  +P I++ G + A +  + ++   +   +++ + +A+  LT
Sbjct: 526 ELIGVPTILVVG-RGAKDGVVELKDRRTGDREELPIDEALSRLT 568


>gi|326776245|ref|ZP_08235510.1| prolyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1]
 gi|326656578|gb|EGE41424.1| prolyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1]
          Length = 567

 Score =  144 bits (362), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 55/325 (16%), Positives = 119/325 (36%), Gaps = 21/325 (6%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++E   H+ L R   +     + +G+  W   G K+   + + +R +
Sbjct: 8   SRLMVKTLRDDPADAETLSHKLLVRAGYVR---RNAAGIWSWLPLGKKVLDNISNVVREE 64

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E+  P +L +  ++ SG W+ Y   +F +K      +    + L P +     
Sbjct: 65  MDAIGAQEVLLPALLPKEPYEASGRWEEYGDLLFRLKD-----RKGGDYLLGPTHEEIFT 119

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
                   SY++LPV L +  + YR+E      G++R R F   D++ F T ++      
Sbjct: 120 QTVKDQCTSYKDLPVMLYQIQTKYRDEARPR-SGVLRGREFQMKDSYSFDTTDEGLAHSY 178

Query: 406 KIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA---ENIMKGVLDTIKNSSQD 461
            +H    I I++  G +  +V   +       S+     A   E+           ++ +
Sbjct: 179 ALHRAAYIKIFERLGLDHRIVSAVSGAMGGSASEEFLAPAAAGEDTFADCPHCDYAANTE 238

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
            +   +   +G+ +G   E    D      +     +     +      V    E     
Sbjct: 239 AVTFALAPVDGSAHGAVEELDTPDT--PTIETLAAHLGVPASATLKNLLVKVDGE----- 291

Query: 522 MIHRAVFGSIERFIGIMIENFKGNL 546
           ++   V G  E  +G + E+    +
Sbjct: 292 IVAVGVPGHREVDLGKLGEHLAPAV 316



 Score = 86.0 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 68/167 (40%), Gaps = 12/167 (7%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFK 543
            + R  + G I Q+       F    +    ++  PV +    +G  + R +  + E   
Sbjct: 403 VLDRAIEIGHIFQLGRKYADTFQLDVL---GQQGKPVRVTMGSYGIGVSRAVAALTEQTA 459

Query: 544 GN----LPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNE-TINYKIRE 597
            +     P  ++P    V     +   E A +++  L +  L +  D R   +   K  +
Sbjct: 460 DDKGLCWPREIAPADVHVVAAGKALQTELALDVSEKLNAAGLRVLVDDRPGVSPGVKFTD 519

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
             +  +P I++ G + +++  + ++   +   +++++ +AI  LT +
Sbjct: 520 SELIGVPKILVAGRR-SADGVLELKDRRTGEREELTVDEAIARLTAD 565


>gi|261392382|emb|CAX49924.1| prolyl-tRNA synthetase (proline--tRNA ligase; ProRS; global RNA
           synthesis factor) [Neisseria meningitidis 8013]
          Length = 570

 Score =  144 bits (362), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 47/223 (21%), Positives = 84/223 (37%), Gaps = 11/223 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       E+    H+ + R      I  + SG+  W   G ++ + + + +R 
Sbjct: 3   ASQFFISTLKEAPAEAALASHKLMIRAG---LIKANASGLYTWMPMGLRVLRKVENVVRE 59

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E+  P V    LWQ+SG W+ Y   +  +K   D     R F + P      
Sbjct: 60  EMARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHD-----RDFCMGPTCEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP       + +R+E      G+MR R F   DA+ F          
Sbjct: 115 ADIVRKEINSYKQLPKNFYHIQTKFRDEVRPRF-GVMRAREFVMKDAYSFHADYASLQTT 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
              +++    I+   G     V   T      GS      AE+
Sbjct: 174 YDAMYDAYCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAES 216



 Score = 82.9 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 64/171 (37%), Gaps = 12/171 (7%)

Query: 484 KDAIGRDWQCGTIQVDFNLPSR---FNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMI 539
            D  GR      I+V      R     A  V+         ++    +G  I R +   I
Sbjct: 395 PDGQGRLKLARGIEVGHVFQLRDKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAI 454

Query: 540 E-NFKGNLPLW---LSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           E N      +W   ++P + ++  +    + +  E A +I   L +    +  D R+E  
Sbjct: 455 EQNNDEKGIIWTKAMAPFEVVIVPMNYKKSDTVREAADKIYAELLAAGADVLLDDRDERA 514

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
              + +  +  IP  I+ GD+   E ++      +   Q V++ + +  +T
Sbjct: 515 GVLLNDSELLGIPHRIVIGDRALKESNVEYAERRNNEAQAVAIGEIVARVT 565


>gi|258652410|ref|YP_003201566.1| prolyl-tRNA synthetase [Nakamurella multipartita DSM 44233]
 gi|258555635|gb|ACV78577.1| prolyl-tRNA synthetase [Nakamurella multipartita DSM 44233]
          Length = 585

 Score =  144 bits (362), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 39/203 (19%), Positives = 81/203 (39%), Gaps = 11/203 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   HR L R   +        G+  W   G+++ + +   +R ++     +E++ P 
Sbjct: 19  DAEVPSHRLLVRAGYIR---RAAPGIYTWLPLGYRVLRNVERIVREEMDAIGAQEVHFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++ +G W  Y  N+F ++           + L P +      +      SY+ L
Sbjct: 76  LLPREPYEATGRWTEYGDNLFRLQDRKQG-----DYLLGPTHEEMFTLLVKDMYSSYKGL 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKD 417
           P+ L +  + YR+E      G++R R F   D++ F   +       + H    I I+  
Sbjct: 131 PLSLYQIQTKYRDEARPR-AGILRGREFVMKDSYSFDLDDAGLAASYQRHRDAYIRIFDR 189

Query: 418 FGFEKIMVKLSTRPEKRVGSDAL 440
            G   ++V   +       S+  
Sbjct: 190 LGLRYVIVAAMSGAMGGSASEEF 212



 Score = 94.1 bits (232), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 26/160 (16%), Positives = 62/160 (38%), Gaps = 8/160 (5%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I Q+            ++ + +    V +     G       I   ++     
Sbjct: 423 RGIEMGHIFQLGRKYAQALGLQVLDENGKLVT-VTMGSYGIGVSRAVAAIAESSYDDKGL 481

Query: 548 LWL---SP--IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
           +W    +P  +  ++   ++  V+ A+ IA  L +  +++  D RN ++  K  +  +  
Sbjct: 482 IWPREVAPADVHVVIAGKSAEIVDTAELIAAGLDAAGITVMLDDRNASVGVKFADAELIG 541

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +P I + G +  +   + +R   S    +V L++ +  L 
Sbjct: 542 VPTICVVG-RGVANGVVEVRDRASGDKTEVPLVEVVEQLR 580


>gi|308160413|gb|EFO62904.1| Prolyl-tRNA synthetase [Giardia lamblia P15]
          Length = 542

 Score =  144 bits (362), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 81/468 (17%), Positives = 163/468 (34%), Gaps = 71/468 (15%)

Query: 195 KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMD 254
           K    + K        D ++     I G       ++T  L    ++       +    +
Sbjct: 7   KDNHGIAKGKQCNAARDQSKQQKQAIRGG------DVTFSLTKTRDTFADWFDAIMDAAE 60

Query: 255 LFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSG-HWD 312
           L        G + +   G+ +   ++     +       +   P V+ +   ++ G H  
Sbjct: 61  LVDRRYPVKGCVVFRPYGFFMENAIMKLCEEEYAKIGISQALFPTVIPESFLKKEGDHIK 120

Query: 313 SYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE 372
            + A  F V+       + R  AL+P +     ++F+  ++SY++LP+++ +  +++R+E
Sbjct: 121 GFEAECFWVEKGGLQPLEER-LALRPTSETAIYSMFSKWVRSYKDLPLKIHQTCTIFRHE 179

Query: 373 PSGSLHGLMRVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP 431
              +   L+RVR    ++AH    T E   ++      +I      F  E        R 
Sbjct: 180 TK-NTKPLIRVREIHWNEAHCCHATAEDAVSQLSDYWKVID---TIFSDELCFKGQKLRR 235

Query: 432 EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDW 491
                    WD                             GA Y    + ++    GR  
Sbjct: 236 V-------CWDKF--------------------------AGADYSEVSDVVMPC--GRVL 260

Query: 492 QCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG----IMIENFKGNL 546
           Q   I  +     S F+  Y N  +E  HP +      G   R +     I  ++    L
Sbjct: 261 QTAGIHNLGQRFSSTFDILYANRANENVHPYL---TCAGISTRVLACALSIHGDSGGLVL 317

Query: 547 PLWLSPIQAIVTTITSS----------AVEYAQEIANLLKSH-HLSIETDFR-NETINYK 594
           P  ++PI  ++  I              +E   EIA+ LKS   L +  D   + ++  K
Sbjct: 318 PPLIAPIHVVIIPIGCGKKNNQESDRQVLEKVNEIADTLKSKLGLRVSVDDDFSRSMGDK 377

Query: 595 IREHSIKKIPIIIICGDKEASERS--IGIRRFGSTTTQKVSLLDAIPI 640
           +  + +K +P+ I  G ++ +     +  R  G    + + + + I +
Sbjct: 378 LYYYELKGVPLRIEIGQRDLTNNQCIVVPRDVGKDQKRVIPITEVIKV 425


>gi|157363113|ref|YP_001469880.1| prolyl-tRNA synthetase [Thermotoga lettingae TMO]
 gi|166980167|sp|A8F3T2|SYP_THELT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|157313717|gb|ABV32816.1| prolyl-tRNA synthetase [Thermotoga lettingae TMO]
          Length = 575

 Score =  144 bits (362), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 54/252 (21%), Positives = 97/252 (38%), Gaps = 13/252 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q           ++E   H  L R   +  IA    GV  +     +    + + +R+
Sbjct: 3   FSQLYAPTLKEAPADAEVISHALLYRAGFIRKIAA---GVYSYLPLAKRTLSKIEAIVRK 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +   +E++ P +    LW+ +G WD Y   M  +K      +  R F L P +    
Sbjct: 60  EMNEIGAQEVSMPVIQPAELWKTTGRWDDYGPEMMKLKD-----RHERDFTLGPTHEEVF 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    L+SY++LP+ L + G  YR+E      GL+R R F   D + F   +Q  NE 
Sbjct: 115 THMVKDELRSYKQLPLFLYQIGPKYRDEIRPRF-GLLRAREFIMKDGYSFHDSDQSLNET 173

Query: 405 LKIH-NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            +   N    I +  G + I+++ ++       S      A      +L   K       
Sbjct: 174 YEACKNAYRKITEKIGLKYIIIEAASGAIGGNESHEFVSFAPVGETNLLKCEKCGYSS-- 231

Query: 464 NTGVLLGEGAFY 475
           N       G ++
Sbjct: 232 NDEQAPYRGKYH 243



 Score = 65.2 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/144 (20%), Positives = 59/144 (40%), Gaps = 8/144 (5%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL---SPIQ 554
           +        NA Y++   E   P ++    +G       I+ +    +  LW    +P +
Sbjct: 413 LGTKYSKAMNALYMDDKGEVK-PFIMGCYGWGISRTMAAIVEQLHDEDGILWPRSVAPFE 471

Query: 555 AIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
            I+T ++        +AQ++ N L S  + +  D R+ +   K ++  +   P+ I  G 
Sbjct: 472 LIITVVSAQDQDQRIFAQKLYNSLLSSEIDVLLDDRDISPGMKFKDADLIGFPLRITVG- 530

Query: 612 KEASERSIGIRRFGSTTTQKVSLL 635
           K   E  + ++   S+ + KVS  
Sbjct: 531 KSLKEGMVELKSRNSSKSIKVSAE 554


>gi|313668476|ref|YP_004048760.1| prolyl-tRNA synthetase [Neisseria lactamica ST-640]
 gi|313005938|emb|CBN87395.1| prolyl-tRNA synthetase [Neisseria lactamica 020-06]
          Length = 570

 Score =  144 bits (362), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 47/223 (21%), Positives = 85/223 (38%), Gaps = 11/223 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       E+    H+ + R      I  + SG+  W   G ++ + + + +R 
Sbjct: 3   ASQFFISTLKEAPAEAALASHKLMIRAG---LIKANASGLYTWMPMGLRVLRKVENVVRE 59

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E+  P V    LWQ+SG W+ Y   +  +K   D     R F + P      
Sbjct: 60  EMARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHD-----RDFCMGPTCEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP       + +R+E      G+MR R F   DA+ F          
Sbjct: 115 ADIVRKEINSYKQLPKNFYHIQTKFRDEVRPRF-GVMRAREFVMKDAYSFHADYASLQTT 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
            + +++    I+   G     V   T      GS      AE+
Sbjct: 174 YQDMYDAYCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAES 216



 Score = 84.8 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 63/171 (36%), Gaps = 12/171 (7%)

Query: 484 KDAIGRDWQCGTIQVDFNLPSR---FNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMI 539
            D  GR      I+V      R     A  V+         ++    +G  I R +   I
Sbjct: 395 PDGQGRLKLARGIEVGHVFQLRDKYTKAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAI 454

Query: 540 E-NFKGNLPLW---LSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           E N      +W   ++P + ++  +    + +  E A +I   L +    +  D R+E  
Sbjct: 455 EQNNDEKGIIWAKAMAPFEVVIVPMNYKKSDTVREAADKIYAELLAAGADVLLDDRDERA 514

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
              + +  +  IP  I+ GD+   E ++          Q V++ + +  +T
Sbjct: 515 GVLLNDSELLGIPHRIVIGDRALKEGNVEYAERRENEAQAVAIGEIVARVT 565


>gi|254669934|emb|CBA04522.1| Prolyl-tRNA synthetase [Neisseria meningitidis alpha153]
          Length = 570

 Score =  144 bits (362), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 48/223 (21%), Positives = 85/223 (38%), Gaps = 11/223 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       E+    H+ + R      I  + SG+  W   G ++ + + + +R 
Sbjct: 3   ASQFFISTLKEAPAEAALASHKLMIRAG---LIKANASGLYTWMPMGLRVLRKVENVVRE 59

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E+  P V    LWQ+SG W+ Y   +  +K   D     R F + P      
Sbjct: 60  EMARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHD-----RDFCMGPTCEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP       + +R+E      G+MR R F   DA+ F          
Sbjct: 115 ADIVRKEINSYKQLPKNFYHIQTKFRDEVRPRF-GVMRAREFVMKDAYSFHADYASLQTT 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
              +++    I+   G E   V   T      GS      AE+
Sbjct: 174 YDAMYDAYCRIFTRLGLEFRPVAADTGSIGGTGSHEFQVLAES 216



 Score = 84.1 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 31/171 (18%), Positives = 63/171 (36%), Gaps = 12/171 (7%)

Query: 484 KDAIGRDWQCGTIQVDFNLPSR---FNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMI 539
            D  GR      I+V      R     A  V+         ++    +G  I R +   I
Sbjct: 395 PDGQGRLKLARGIEVGHVFQLRDKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAI 454

Query: 540 E-NFKGNLPLW---LSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           E N      +W   ++P + ++  +    + +  E A +I   L +    +  D R+E  
Sbjct: 455 EQNNDEKGIIWTKAMAPFEVVIVPMNYKKSDTVREAADKIYAELLAAGADVLLDDRDERA 514

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
              + +  +  IP  I+ GD+   E ++          Q +++ + +  +T
Sbjct: 515 GVLLNDSELLGIPHRIVIGDRALKEGNVEYAERRDNEAQAIAIGEIVARVT 565


>gi|240013893|ref|ZP_04720806.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae DGI18]
 gi|240016334|ref|ZP_04722874.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae FA6140]
 gi|240121462|ref|ZP_04734424.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae PID24-1]
 gi|260440251|ref|ZP_05794067.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
          Length = 570

 Score =  144 bits (362), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 46/223 (20%), Positives = 84/223 (37%), Gaps = 11/223 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       E+    H+ + R      I  + SG+  W   G ++ + + + +R 
Sbjct: 3   ASQFFISTLKEAPAEAAFASHKLMIRAG---LIKANASGLYTWMPMGLRVLRKVENVVRE 59

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E+  P V    LWQ+SG W+ Y   +  +K      +  R F + P      
Sbjct: 60  EMARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKD-----RHERDFCMGPTCEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP       + +R+E      G+MR R F   DA+ F          
Sbjct: 115 ADIVRKEINSYKQLPKNFYHIQTKFRDEVRPRF-GVMRAREFVMKDAYSFHADYASLQAT 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
              +++    I+   G     V   T      GS      AE+
Sbjct: 174 YDAMYDAYCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAES 216



 Score = 84.4 bits (207), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 62/171 (36%), Gaps = 12/171 (7%)

Query: 484 KDAIGRDWQCGTIQVDFNLPSR---FNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMI 539
            D  GR      I+V      R     A  V+         ++    +G  I R +   I
Sbjct: 395 PDGQGRLKLARGIEVGHVFQLRGKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAI 454

Query: 540 E-NFKGNLPLW---LSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           E N      +W   ++P + ++  +    + +  E A  I   L +    +  D R+E  
Sbjct: 455 EQNNDEKGIIWTKAMAPFEVVIVPMNYKKSDTVREAADRIYAELLAAGADVLLDDRDERA 514

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
              + +  +  IP  I+ GD+   E ++          Q V++ + +  +T
Sbjct: 515 GVLLNDSELLGIPHRIVIGDRALKEGNVEYAERRGNEAQAVAIGEIVARVT 565


>gi|62126444|gb|AAX64147.1| proline tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
          Length = 547

 Score =  144 bits (362), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 44/217 (20%), Positives = 87/217 (40%), Gaps = 8/217 (3%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
            I +  SG+  W   G ++ + + + +R ++ +    E++ P V    LWQ+SG W+ Y 
Sbjct: 6   MIRKLASGLYTWLPTGLRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGRWEQYG 65

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
             +       +     R F L P +      +  + L SY++LP+   +  + +R+E   
Sbjct: 66  PELLRFVDRGE-----RPFVLGPTHEEVITDLVRNELSSYKQLPLNFFQIQTKFRDEVRP 120

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              G+MR R F   DA+ F T ++   E    ++     I+   G +   V+  T     
Sbjct: 121 RF-GVMRSREFLMKDAYSFHTSQESLQETYDAMYAAYSRIFSRMGLDFRAVQADTGSIGG 179

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
             S      A++    ++ +  +     I     +  
Sbjct: 180 NASHEFQVLAQSGEDDIVFSDVSDYAANIELAEAIAP 216



 Score = 82.9 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 57/177 (32%), Gaps = 13/177 (7%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
           P  +      I R  + G I Q+         A             ++    +G  + R 
Sbjct: 370 PSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDG---RNQILTMGCYGIGVTRV 426

Query: 535 IGIMIENF----KGNLPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDF 586
           +   IE          P  ++P Q  +  +         E A+++ + L++  + +  D 
Sbjct: 427 VAAAIEQNFDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLMDD 486

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           R E       +  +  IP  I+ GD+      I  +   S     +   D +  L K
Sbjct: 487 RKERPGVMFADMELIGIPHTIVIGDRNLDNDDIEYKYRRSGKKSLIKTGDIVDYLVK 543


>gi|167039934|ref|YP_001662919.1| phosphoribulokinase/uridine kinase [Thermoanaerobacter sp. X514]
 gi|300915352|ref|ZP_07132666.1| phosphoribulokinase/uridine kinase [Thermoanaerobacter sp. X561]
 gi|307724741|ref|YP_003904492.1| AAA ATPase [Thermoanaerobacter sp. X513]
 gi|166854174|gb|ABY92583.1| phosphoribulokinase/uridine kinase [Thermoanaerobacter sp. X514]
 gi|300888628|gb|EFK83776.1| phosphoribulokinase/uridine kinase [Thermoanaerobacter sp. X561]
 gi|307581802|gb|ADN55201.1| AAA ATPase [Thermoanaerobacter sp. X513]
          Length = 547

 Score =  144 bits (362), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 47/236 (19%), Positives = 91/236 (38%), Gaps = 3/236 (1%)

Query: 12  GSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSL 70
           G I  +P      D+A+          VA  ++ ++ DL+  V ++ ++E +        
Sbjct: 7   GDIYEYPEGTKLEDIAKDFEHLYNGIIVAAKVDNELKDLNCTVSKDSTVEFVDTTIEEGT 66

Query: 71  AVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEII 130
            + R S   +  +AV+ + P   V I   +  G Y +       ++  ++ I+K+M+EII
Sbjct: 67  RIYRRSLTFVFIKAVKELLPGATVTIEHSLGKGLYCEIHG-YSLNNKIVSMIKKRMEEII 125

Query: 131 ARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRS 190
            +D    ++ L  E+A +LF+ +    K+++ +    KE V++Y      D    P V S
Sbjct: 126 KKDFKIERKMLPKEEAIKLFKKEGLTEKIKLFKD-TDKEKVSVYYCDGTVDFFYSPCVPS 184

Query: 191 TGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDH 246
           TG +K F       G            S            + +            +
Sbjct: 185 TGYLKVFDIRFYFPGIILIAPDVYNPRSLPVFVDVPKLASIFKEAEDWASILNISY 240


>gi|268595028|ref|ZP_06129195.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|268599257|ref|ZP_06133424.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|268686874|ref|ZP_06153736.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
 gi|268548417|gb|EEZ43835.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|268583388|gb|EEZ48064.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|268627158|gb|EEZ59558.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
          Length = 580

 Score =  144 bits (362), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 46/223 (20%), Positives = 84/223 (37%), Gaps = 11/223 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       E+    H+ + R      I  + SG+  W   G ++ + + + +R 
Sbjct: 13  ASQFFISTLKEAPAEAAFASHKLMIRAG---LIKANASGLYTWMPMGLRVLRKVENVVRE 69

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E+  P V    LWQ+SG W+ Y   +  +K      +  R F + P      
Sbjct: 70  EMARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKD-----RHERDFCMGPTCEEVI 124

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP       + +R+E      G+MR R F   DA+ F          
Sbjct: 125 ADIVRKEINSYKQLPKNFYHIQTKFRDEVRPRF-GVMRAREFVMKDAYSFHADYASLQAT 183

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
              +++    I+   G     V   T      GS      AE+
Sbjct: 184 YDAMYDAYCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAES 226



 Score = 83.7 bits (205), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 62/171 (36%), Gaps = 12/171 (7%)

Query: 484 KDAIGRDWQCGTIQVDFNLPSR---FNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMI 539
            D  GR      I+V      R     A  V+         ++    +G  I R +   I
Sbjct: 405 PDGQGRLKLARGIEVGHVFQLRGKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAI 464

Query: 540 E-NFKGNLPLW---LSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           E N      +W   ++P + ++  +    + +  E A  I   L +    +  D R+E  
Sbjct: 465 EQNNDEKGIIWTKAMAPFEVVIVPMNYKKSDTVREAADRIYAELLAAGADVLLDDRDERA 524

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
              + +  +  IP  I+ GD+   E ++          Q V++ + +  +T
Sbjct: 525 GVLLNDSELLGIPHRIVIGDRALKEGNVEYAERRDNEAQAVAIGEIVARVT 575


>gi|239944683|ref|ZP_04696620.1| prolyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
 gi|239991146|ref|ZP_04711810.1| prolyl-tRNA synthetase [Streptomyces roseosporus NRRL 11379]
 gi|291448145|ref|ZP_06587535.1| prolyl-tRNA synthetase 1 [Streptomyces roseosporus NRRL 15998]
 gi|291351092|gb|EFE77996.1| prolyl-tRNA synthetase 1 [Streptomyces roseosporus NRRL 15998]
          Length = 567

 Score =  144 bits (362), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 55/325 (16%), Positives = 120/325 (36%), Gaps = 21/325 (6%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++E   H+ L R   +     + +G+  W   G K+   + + +R +
Sbjct: 8   SRLMIKTLRDDPADAETLSHKLLVRAGYVR---RNAAGIWTWLPLGKKVLDNISNVVREE 64

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E+  P +L +  ++ SG W+ Y   +F +K      +    + L P +     
Sbjct: 65  MDAIGAQEVLLPALLPKEPYEASGRWEEYGDLLFRLKD-----RKGGDYLLGPTHEEIFT 119

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
                   SY++LPV L +  + YR+E      G++R R F   D++ F T ++      
Sbjct: 120 QTVKDQCTSYKDLPVMLYQIQTKYRDEARPR-SGVLRGREFQMKDSYSFDTTDEGLAHSY 178

Query: 406 KIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA---ENIMKGVLDTIKNSSQD 461
            +H    I I++  G +  +V   +       S+     A   E+      +    ++ +
Sbjct: 179 ALHRAAYIKIFERLGLDHRIVSAVSGAMGGSASEEFLAPAAAGEDTFADCPNCDYAANTE 238

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
            +   +   +G+ +G   E    D      +     +     +      V    E     
Sbjct: 239 AVTFALAPVDGSAHGAVEELDTPDT--PTIETLAEHLGVPASATLKNLLVKVDGE----- 291

Query: 522 MIHRAVFGSIERFIGIMIENFKGNL 546
           ++   V G  E  +G + E+    +
Sbjct: 292 IVAVGVPGHREVDLGKLGEHLAPAV 316



 Score = 86.0 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 68/167 (40%), Gaps = 12/167 (7%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFK 543
            + R  + G I Q+       F    +    ++  PV +    +G  + R +  + E   
Sbjct: 403 VLDRAIEIGHIFQLGRKYADTFQLDVL---GQQGKPVRVTMGSYGIGVSRAVAALTEQTA 459

Query: 544 GN----LPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNE-TINYKIRE 597
            +     P  ++P    V     +   E A +++  L +  L +  D R   +   K  +
Sbjct: 460 DDKGLCWPREIAPADVHVVAAGKALQTELALDVSEKLNAAGLRVLVDDRAGVSPGVKFTD 519

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
             +  +P I++ G + +++  + ++   +   +++++ +AI  LT +
Sbjct: 520 SELIGVPKILVAGRR-SADGVLELKDRRTGEREELTVDEAIARLTAD 565


>gi|268596592|ref|ZP_06130759.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|268601604|ref|ZP_06135771.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|268550380|gb|EEZ45399.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|268585735|gb|EEZ50411.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
          Length = 580

 Score =  144 bits (362), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 46/223 (20%), Positives = 84/223 (37%), Gaps = 11/223 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       E+    H+ + R      I  + SG+  W   G ++ + + + +R 
Sbjct: 13  ASQFFISTLKEAPAEAAFASHKLMIRAG---LIKANASGLYTWMPMGLRVLRKVENVVRE 69

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E+  P V    LWQ+SG W+ Y   +  +K      +  R F + P      
Sbjct: 70  EMARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKD-----RHERDFCMGPTCEEVI 124

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP       + +R+E      G+MR R F   DA+ F          
Sbjct: 125 ADIVRKEINSYKQLPKNFYHIQTKFRDEVRPRF-GVMRAREFVMKDAYSFHADYASLQAT 183

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
              +++    I+   G     V   T      GS      AE+
Sbjct: 184 YDAMYDAYCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAES 226



 Score = 83.7 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 62/171 (36%), Gaps = 12/171 (7%)

Query: 484 KDAIGRDWQCGTIQVDFNLPSR---FNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMI 539
            D  GR      I+V      R     A  V+         ++    +G  I R +   I
Sbjct: 405 PDGQGRLKLARGIEVGHVFQLRGKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAI 464

Query: 540 E-NFKGNLPLW---LSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           E N      +W   ++P + ++  +    + +  E A  I   L +    +  D R+E  
Sbjct: 465 EQNNDEKGIIWTKAMAPFEVVIVPMNYKKSDTVREAADRIYAELLAAGADVLLDDRDERA 524

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
              + +  +  IP  I+ GD+   E ++          Q V++ + +  +T
Sbjct: 525 GVLLNDSELLGIPHRIVIGDRALKEGNVEYAERRDNEAQAVAIGEIVARVT 575


>gi|19704979|ref|NP_602474.1| prolyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|81848323|sp|Q8RIE2|SYP_FUSNN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|19712883|gb|AAL93773.1| Prolyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
          Length = 567

 Score =  144 bits (362), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 56/246 (22%), Positives = 98/246 (39%), Gaps = 11/246 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  +       +E+E   H+ + R   +  +A   SG+  +   G++  + + + +R 
Sbjct: 3   FSKAYIKTLKETPKEAEIASHKLMLRAGMIKKLA---SGIYAYLPLGYRTIKKIENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LWQ+SG WD     M  +K      +  R F L P      
Sbjct: 60  EMDRAGALELLMPVVQPAELWQESGRWDVMGPEMLRLKD-----RHERDFVLSPTQEEMI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
            A+    + SY+ LP+ L    + +R+E      GLMR R FT  DA+ F T  E +  E
Sbjct: 115 TAIIRSDISSYKSLPINLYHIQTKFRDERRPRF-GLMRGREFTMKDAYSFHTSQESLDEE 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            L + +    I+   G +   V   +      GS      AE+    ++ +  +     I
Sbjct: 174 FLNMRDTYTRIFTRCGLKFRPVDADSGNIGGSGSQEFQVLAESGEDEIIYSDGSEYAANI 233

Query: 464 NTGVLL 469
              V  
Sbjct: 234 EKAVSE 239



 Score = 81.8 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 61/161 (37%), Gaps = 7/161 (4%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPL 548
           R  +CG I    +  S+           K   +++     G        + +N   N  +
Sbjct: 403 RGIECGQIFKLGDKYSKAMNATYLDEKGKTQFMLMGCYGIGVTRTMAASIEQNNDENGII 462

Query: 549 WLSPIQAIVTTITSS------AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
           W   I   +  +  +       V  A++I N L+   + +  D R+E   +K ++  +  
Sbjct: 463 WPVSIAPYIVDVIPANIKNEVQVSLAEKIYNELQEEKIDVMLDDRDEKPGFKFKDADLIG 522

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            P  ++ G + A E  + ++   +  T +VS  + I  + +
Sbjct: 523 FPFKVVVGKR-ADEGIVELKIRRTGETLEVSQNEVIAKIKE 562


>gi|297568238|ref|YP_003689582.1| prolyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
 gi|296924153|gb|ADH84963.1| prolyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
          Length = 576

 Score =  144 bits (362), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 48/221 (21%), Positives = 82/221 (37%), Gaps = 11/221 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L        E+E   H+ + R   +  +    +GV  +   G    + +   +R 
Sbjct: 3   FSQLLLPTLKEDPAEAEVISHKLMLRGGFIRKL---TAGVYSYLPLGLAAIRKVEQIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +E+  P V    LW++SG W+ Y   +   K      +  R   L P +    
Sbjct: 60  EMNRAGAQELLLPMVQPADLWRESGRWEKYGPELLRFKD-----RHQRESCLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SYR+LPV L +  + +R+E      GLMR R F   D + F   E      
Sbjct: 115 TDLVRMNIHSYRQLPVNLYQVQTKFRDEIRPRF-GLMRGREFIMKDGYSFDLDEAGAELT 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
             K+++    I+   G     V+  T       S      A
Sbjct: 174 YRKMYDAYQRIFSRCGLAFRAVEADTGTIGGSFSHEFMVLA 214



 Score = 82.1 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 35/167 (20%), Positives = 68/167 (40%), Gaps = 12/167 (7%)

Query: 486 AIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENF- 542
           A+ R  + G I  +  N     NA +++   +  H VM     FG  + R +   IE   
Sbjct: 399 ALTRGIEVGHIFKLGTNYSEALNATFLDDQGQSRHFVM---GCFGIGVSRTVAAAIEQNH 455

Query: 543 ---KGNLPLWLSPIQAIVTTITSS---AVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                  PL ++P Q I+  +T         A+ +   L +  + +  D R+E    K +
Sbjct: 456 DRDGMIFPLPIAPFQVILLNLTPKDEVISAEAERLYQALTADGIEVLLDDRDERPGSKFK 515

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  +  IPI ++ G +  ++  + IR      T + +   A  ++ +
Sbjct: 516 DADLIGIPIRLMVGKRFKNDGLLEIRTRADGQTSEATPAAAEAVIKE 562


>gi|297544993|ref|YP_003677295.1| phosphoribulokinase/uridine kinase [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
 gi|296842768|gb|ADH61284.1| phosphoribulokinase/uridine kinase [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
          Length = 547

 Score =  143 bits (361), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 49/236 (20%), Positives = 90/236 (38%), Gaps = 3/236 (1%)

Query: 12  GSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSL 70
           G+I  +P      D+A+          VA  ++ ++ DL+  V ++ ++E +        
Sbjct: 7   GNIYEYPEGTKLEDIAKDFEHVYNGIIVAAKVDNELKDLNCTVSKDSTVEFVDTTIEEGT 66

Query: 71  AVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEII 130
            + R S   +  +AV+ + P   V I   +  G Y +       ++  ++ I+K+M+EII
Sbjct: 67  RIYRRSLTFVFIKAVKELLPGATVTIEHSLGKGLYCEIHG-YSLNNKIVSMIKKRMEEII 125

Query: 131 ARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRS 190
            +D    ++ L  E+A +LFE +    KV + +    KE V +Y      D    P V S
Sbjct: 126 EKDFKIERKMLPKEEAIKLFEKEGLTEKVRLFKD-TNKEKVPVYYCDGTVDFFYSPCVPS 184

Query: 191 TGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDH 246
           TG +K F       G            S            + +            +
Sbjct: 185 TGYLKVFDIRFYFPGVILIAPDVYNPRSLPVFVDVPKLASIFKEAEDWASILNISY 240


>gi|239999200|ref|ZP_04719124.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|240080454|ref|ZP_04724997.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|240113176|ref|ZP_04727666.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|240115935|ref|ZP_04729997.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|240118232|ref|ZP_04732294.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
 gi|240123781|ref|ZP_04736737.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|240125970|ref|ZP_04738856.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
 gi|240128484|ref|ZP_04741145.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
 gi|254493969|ref|ZP_05107140.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
 gi|268603943|ref|ZP_06138110.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
 gi|268682406|ref|ZP_06149268.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|268684564|ref|ZP_06151426.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
 gi|226513009|gb|EEH62354.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
 gi|268588074|gb|EEZ52750.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
 gi|268622690|gb|EEZ55090.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|268624848|gb|EEZ57248.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
          Length = 570

 Score =  143 bits (361), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 46/223 (20%), Positives = 84/223 (37%), Gaps = 11/223 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       E+    H+ + R      I  + SG+  W   G ++ + + + +R 
Sbjct: 3   ASQFFISTLKEAPAEAAFASHKLMIRAG---LIKANASGLYTWMPMGLRVLRKVENVVRE 59

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E+  P V    LWQ+SG W+ Y   +  +K      +  R F + P      
Sbjct: 60  EMARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKD-----RHERDFCMGPTCEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP       + +R+E      G+MR R F   DA+ F          
Sbjct: 115 ADIVRKEINSYKQLPKNFYHIQTKFRDEVRPRF-GVMRAREFVMKDAYSFHADYASLQAT 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
              +++    I+   G     V   T      GS      AE+
Sbjct: 174 YDAMYDAYCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAES 216



 Score = 83.7 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 62/171 (36%), Gaps = 12/171 (7%)

Query: 484 KDAIGRDWQCGTIQVDFNLPSR---FNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMI 539
            D  GR      I+V      R     A  V+         ++    +G  I R +   I
Sbjct: 395 PDGQGRLKLARGIEVGHVFQLRGKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAI 454

Query: 540 E-NFKGNLPLW---LSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           E N      +W   ++P + ++  +    + +  E A  I   L +    +  D R+E  
Sbjct: 455 EQNNDEKGIIWTKAMAPFEVVIVPMNYKKSDTVREAADRIYAELLAAGADVLLDDRDERA 514

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
              + +  +  IP  I+ GD+   E ++          Q V++ + +  +T
Sbjct: 515 GVLLNDSELLGIPHRIVIGDRALKEGNVEYAERRDNEAQAVAIGEIVARVT 565


>gi|74318130|ref|YP_315870.1| prolyl-tRNA synthetase [Thiobacillus denitrificans ATCC 25259]
 gi|74057625|gb|AAZ98065.1| prolyl-tRNA synthetase [Thiobacillus denitrificans ATCC 25259]
          Length = 579

 Score =  143 bits (361), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 50/224 (22%), Positives = 87/224 (38%), Gaps = 11/224 (4%)

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISY 282
           T   TQ  L+       E+E   H+ + R   +  +   GSG+  W   G ++ + + + 
Sbjct: 3   TMRTTQFFLSTTKEAPSEAELVSHKLMLRAGLIKRL---GSGLYTWMPLGLRVLRRVEAV 59

Query: 283 MRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           +R ++      E+  P V    LWQ++G W  +   M  +K      +  R F   P + 
Sbjct: 60  VREEMNRAGAIELLMPAVQPAELWQETGRWAQFGPQMLKIKD-----RHEREFCFGPTHE 114

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQM 400
                +    +KSYR+LP+   +  + +R+E      G+MR R F   DA+ F    E +
Sbjct: 115 EVITDLARREIKSYRQLPLNFYQIQTKFRDEIRPRF-GVMRAREFLMKDAYSFHASRESL 173

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
                 +++    I+   G     V   T       S      A
Sbjct: 174 AATYQAMYDAYGRIFTRLGLRFRAVAADTGAIGGSASHEFHVLA 217



 Score = 67.9 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 26/166 (15%), Positives = 60/166 (36%), Gaps = 14/166 (8%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G + Q+        NA Y++    K   + +     G        + +N  G   
Sbjct: 409 RGIEVGHVFQLGNKYSQAMNATYLDEAG-KAQAMEMGCYGIGVSRIVAAAVEQNHDGKGI 467

Query: 548 LW---LSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +W   ++P   ++  I    ++S    A  +   L +  + +  D R+E       +  +
Sbjct: 468 VWPASMAPFSVVIVAIGYGKSASVKNAADTLYADLMAVGVEVLLDDRDERPGVMFADAEL 527

Query: 601 KKIPIIIICGDKEASERSIGIRRFG-----STTTQKVSLLDAIPIL 641
             IP  +  G++  +E  +  +            +K+++ +A   L
Sbjct: 528 VGIPHRVTLGERGLNEGVVEYQPRRAAPEQGADARKIAVAEAKAFL 573


>gi|296314467|ref|ZP_06864408.1| proline--tRNA ligase [Neisseria polysaccharea ATCC 43768]
 gi|296838764|gb|EFH22702.1| proline--tRNA ligase [Neisseria polysaccharea ATCC 43768]
          Length = 570

 Score =  143 bits (361), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 47/223 (21%), Positives = 85/223 (38%), Gaps = 11/223 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       E+    H+ + R      I  + SG+  W   G ++ + + + +R 
Sbjct: 3   ASQFFISTLKEAPAEAALASHKLMIRAG---LIKANASGLYTWMPMGLRVLRKVENVVRE 59

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E+  P V    LWQ+SG W+ Y   +  +K   D     R F + P      
Sbjct: 60  EMARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHD-----RDFCMGPTCEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP       + +R+E      G+MR R F   DA+ F          
Sbjct: 115 ADIVRKEINSYKQLPKNFYHIQTKFRDEVRPRF-GVMRAREFVMKDAYSFHADYASLQTA 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
            + +++    I+   G     V   T      GS      AE+
Sbjct: 174 YQDMYDAYCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAES 216



 Score = 82.9 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/171 (18%), Positives = 62/171 (36%), Gaps = 12/171 (7%)

Query: 484 KDAIGRDWQCGTIQVDFNLPSR---FNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMI 539
            D  GR      I+V      R     A  V+         ++    +G  I R +   I
Sbjct: 395 PDEQGRLKLARGIEVGHVFQLRDKYTKAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAI 454

Query: 540 E-NFKGNLPLW---LSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           E N      +W   ++P + ++  +    + +  E   +I   L +    +  D R+E  
Sbjct: 455 EQNNDEKGIIWTKTMAPFEVVIVPMNYKKSDAVREATDKIYAELLAAGADVLLDDRDERA 514

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
              + +  +  IP  I+ GD+   E ++          Q V++ + +  +T
Sbjct: 515 GVLLNDSELLGIPHRIVIGDRALKEGNVEYAERRDNEVQAVAIGEIVARVT 565


>gi|219110281|ref|XP_002176892.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217411427|gb|EEC51355.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 671

 Score =  143 bits (361), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 61/435 (14%), Positives = 139/435 (31%), Gaps = 76/435 (17%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
            E    + +  + R   L   +     ++     G  ++  + + +  KI+    E    
Sbjct: 171 REVDYSKWYNDIVRVTGLAETSPVRGCMVI-KPWGMSLWDRVRTELDAKIQAHGAENAYF 229

Query: 297 PQVLDQHLW-QQSGHWDSYRANMFAVKCA-------------DDTIKDLRTFALKPMNCP 342
           P ++ Q    +++ H D +      V                D          ++P +  
Sbjct: 230 PLLIPQSFLSKEAEHVDGFAKECAVVTHHRLTTNPDGSGLMVDPEAALEDPLIVRPTSET 289

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMF 401
               +F   + S+R+LP+++ ++ +V R E        +R   F   + H    T++   
Sbjct: 290 MIWYMFRKWIVSHRDLPLKINQWANVMRWEMR--TRPFLRTSEFLWQEGHTAHATRDGAI 347

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
            +   + +   ++ +D     ++  + +  E+  G++  +            TI+   Q+
Sbjct: 348 ADAQAMLDNYATLCEDLLAMPVVRGVKSPSERFAGAEDTY------------TIEALMQN 395

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
                +  G   F                       +  +    FN  + + +  +    
Sbjct: 396 G--WALQSGTSHF-----------------------LGQSFGKAFNVTFQDENGTQQD-- 428

Query: 522 MIHRAVFGSIERFIGIMIENFKGNLPLWL----SPIQAIVTTITSSAVEY---------A 568
            +    +G+  R IG +I     +  L L    +P Q I+  I     +           
Sbjct: 429 -VWGTSWGASTRLIGALIMTHSDDAGLVLPPKVAPAQVIIVPIPPKKDDAETKQAMDIAM 487

Query: 569 QEIANLLKSHHLSIETDFRN-ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGST 627
            ++   LK+  L  + D R+      K  E   K +P+ I  G ++        +     
Sbjct: 488 NQLTASLKAEGLRFKVDDRDFVRSGAKFFEWERKGVPLRIEIGPRDVRNNVCVFKYRAGE 547

Query: 628 ---TTQKVSLLDAIP 639
                Q + L +A  
Sbjct: 548 NADEKQTIPLSEAAA 562


>gi|269219602|ref|ZP_06163456.1| proline--tRNA ligase [Actinomyces sp. oral taxon 848 str. F0332]
 gi|269210844|gb|EEZ77184.1| proline--tRNA ligase [Actinomyces sp. oral taxon 848 str. F0332]
          Length = 594

 Score =  143 bits (361), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 39/212 (18%), Positives = 83/212 (39%), Gaps = 11/212 (5%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
           +        ++E   HR L R   +        G+  W   G ++ + +   +R +++  
Sbjct: 6   VRTLREDPADAEVASHRLLVRAGYIR---RAAPGIYTWLPLGLRVLRKIERIVREEMEAA 62

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
             +E++ P +L +  ++ SG W  Y   +F +K   ++      + L P +      +  
Sbjct: 63  GSQEVHFPALLPREPYEASGRWSDYGPTLFKLKDRKES-----DYLLAPTHEELFTLLVK 117

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIH 408
               SY++LP+ L +  + YR+E      G++R R F   DA+ F   E   +     + 
Sbjct: 118 DMYSSYKDLPLSLYQIQTKYRDEARPR-AGVIRSREFVMKDAYSFDVDEAGLDASYAAMR 176

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           +    I+   G   ++    +       S+  
Sbjct: 177 SAYQRIFARLGLPFVICSAVSGAMGGSRSEEF 208



 Score = 74.8 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 60/163 (36%), Gaps = 12/163 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNL 546
           +  + G I Q+            ++ + +     M    +   I R +  + E N  G  
Sbjct: 426 KGIEVGHIFQLGRKYAKALGLSVLDENGKSRTVTMGSYGI--GITRVLAALAEENHDGRG 483

Query: 547 PLWL---SPIQAIVTTITSSAVEY--AQEIANLLKSHHLSIETDFRNE-TINYKIREHSI 600
            +W    +P    +         Y  A+EIA  L++  + +  D R + +   K  ++ +
Sbjct: 484 LMWPASVAPAHVHIVAAGKDDALYAAAEEIAAGLEADGVEVLLDDRRKVSAGVKFADYEL 543

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             +P  ++ G +  +E  + IR     T +   +  A   + +
Sbjct: 544 LGVPFGVVVG-RGLAEGLVEIRDRAGETIEA-PVEQARERIGE 584


>gi|119774298|ref|YP_927038.1| prolyl-tRNA synthetase [Shewanella amazonensis SB2B]
 gi|152016599|sp|A1S4R2|SYP_SHEAM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|119766798|gb|ABL99368.1| prolyl-tRNA synthetase [Shewanella amazonensis SB2B]
          Length = 572

 Score =  143 bits (361), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 46/245 (18%), Positives = 92/245 (37%), Gaps = 11/245 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  L+        +E   H+ + R   +     + SG+  +   G ++ + + + +R +
Sbjct: 4   SKYLLSTQKETPANAEVVSHQLMLRAGMIR---RNASGLYSYLPTGLRVLRKVEAIVREE 60

Query: 287 IK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      EI  P V    LW ++G WD +   +        T +  R F L P +     
Sbjct: 61  MNKAGAIEILMPMVQPGDLWVETGRWDQFGPELLRF-----TDRHNRDFVLGPTHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNEC 404
            +    + SY++LP+ L +  + +R+E      G+MR R F   DA+ F  T+E +    
Sbjct: 116 DLIRKEVSSYKQLPLNLYQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHLTQETLDETY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
             ++    +I+   G     V   T       S      A++    +  +  +     I 
Sbjct: 175 QAMYTAYSNIFSRMGLAFRPVLADTGSIGGSVSHEFHVLAQSGEDLIAYSTGSDYAANIE 234

Query: 465 TGVLL 469
                
Sbjct: 235 KAEAP 239



 Score = 81.0 bits (198), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 29/211 (13%), Positives = 62/211 (29%), Gaps = 35/211 (16%)

Query: 466 GVLLGEGAFYGPKFEYILKDAIG----------------------RDWQCGTI-QVDFNL 502
           G       F+G  +E  L    G                      R  + G I Q+    
Sbjct: 361 GANEDGKHFFGINWERDLPLVQGADIRNVVEGEATPDGKGTYAFARGIEVGHIFQLGNKY 420

Query: 503 PSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN----LPLWLSPIQAIV 557
               NA  ++ + +     ++    +G  + R +   IE          P  ++P    +
Sbjct: 421 SEAMNATVLDENGKSQ---IMLMGCYGVGVSRIVAAAIEQNNDERGIVWPEAIAPFTVGI 477

Query: 558 TTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
             +    +    + A+ +   L      +  D R E       +  +  IP  ++ GD+ 
Sbjct: 478 LPMNMHKSHRVTDTAEALYKELTEAGFEVLFDDRKERPGVMFADMELLGIPHTVVIGDRN 537

Query: 614 ASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
                   +   +    +V   + +  L  +
Sbjct: 538 IDTGVYEYKNRRTGEKTEVPFAELVSFLKAQ 568


>gi|257453930|ref|ZP_05619207.1| prolyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
 gi|257448702|gb|EEV23668.1| prolyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
          Length = 586

 Score =  143 bits (361), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 51/248 (20%), Positives = 98/248 (39%), Gaps = 10/248 (4%)

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLF--HIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
              +Q+ +   +    D   ++ ++ L    I +  SG+  W   G K  Q +   +R +
Sbjct: 1   MRASQFTFATLKETPSDADIISSQLMLRAGMIRKSASGLYTWLPMGLKTLQKVKKIIREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +   + +E+  P V    LWQ+SG W++Y   +   K      +  R F L P +     
Sbjct: 61  MDAINCQELLMPVVQSAELWQESGRWEAYGPELLRFKD-----RHQRDFVLGPTHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +  + LKSY++LPV   +  + +R+E      G+MR R F   DA+ F   +       
Sbjct: 116 DIARNLLKSYKQLPVSYYQVQTKFRDEIRPRF-GVMRSREFIMKDAYSFHIDQPSLQRTY 174

Query: 406 -KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
             ++    +I+   G +   V+  T       S      A +    ++ +  ++    I 
Sbjct: 175 DDMYRAYHNIFTRLGLDFRAVQADTGSIGGFASHEFQVLAGSGEDDIVFSDSSAYAANIE 234

Query: 465 TGVLLGEG 472
               +  G
Sbjct: 235 LAEAVTLG 242



 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 62/190 (32%), Gaps = 26/190 (13%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
           P  +      I R  + G I Q+        N   +    E+  PV+     +G  + R 
Sbjct: 395 PSPDGQGTLQIRRGIEVGHIFQLGDKYAKALNCAVM---GEQGKPVITMMGCYGIGVTRI 451

Query: 535 IGIMIE-NFKGNLPLW--------LSPIQAIVTTI---------TSSAVEYAQEIANLLK 576
           +   IE N   N  +W        L+P    +  +         T  A++ A+ +   LK
Sbjct: 452 VAAAIEQNHDDNGIIWKTSSTGESLAPFTVAIVPMIKGKMKDAATDKAMQLAEALYTELK 511

Query: 577 SHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA-SERSI--GIRRFGSTTTQKVS 633
           +  + +  D R+E    K  +  +  IP  I+  +K       +            Q ++
Sbjct: 512 AQGVDVLLDDRDERAGVKFADLELIGIPHRIVISEKNISETGEVKYEYVNRQDGEKQLLT 571

Query: 634 LLDAIPILTK 643
                 +   
Sbjct: 572 AAQLNQLFKD 581


>gi|182414055|ref|YP_001819121.1| phosphoribulokinase/uridine kinase [Opitutus terrae PB90-1]
 gi|177841269|gb|ACB75521.1| phosphoribulokinase/uridine kinase [Opitutus terrae PB90-1]
          Length = 567

 Score =  143 bits (361), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 57/214 (26%), Positives = 99/214 (46%), Gaps = 3/214 (1%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           +I++  PDG     P  AT + +   I+  L    V V +NG++ DL+  +  E  +  +
Sbjct: 12  EIEVHLPDGRTLRGPRGATAAVLLAPIADDLPAPLVGVVVNGELFDLAHAIDLEARVRPV 71

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFSSDELAQ 121
           T  D     + R S  +++  A   ++PE  + I   +   G++ +     P +S ELA 
Sbjct: 72  TMADADGARIYRRSLTYLLDYAFSRLYPEATLLIDHSLASGGYFCNIRGRAPLTSAELAA 131

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +E  M+ I+  + PF +  ++  +A   F+ +K+A K  ++     K  +TLY+ GE FD
Sbjct: 132 LEADMRRIVGENLPFNRHEVTLAEAIAHFDRQKQADKSRLM-RHRRKPTITLYQLGERFD 190

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRP 215
              G  V STG +K F  +    G   R      
Sbjct: 191 DRHGYMVPSTGYLKWFDVVAINGGFALRYPRQHT 224


>gi|323495331|ref|ZP_08100409.1| prolyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
 gi|323310402|gb|EGA63588.1| prolyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
          Length = 571

 Score =  143 bits (361), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 59/330 (17%), Positives = 116/330 (35%), Gaps = 17/330 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +   L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R+
Sbjct: 3   TSNYLLSTLKETPNDAEVVSHQLMLRAGMIRKLA---SGLYTWLPTGLRVLRKVENIVRQ 59

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           +I      E   P V    LW+++G  +     +        T +  R F L P      
Sbjct: 60  EIDNAGAVETLMPVVQPFELWEETGRSEKMGPELLRF-----TDRHTRPFVLSPTAEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
            ++  + + SY++LP+ L +  + +R+E      G+MR R F   DA+ F   +    + 
Sbjct: 115 TSLVRNEVSSYKQLPLNLYQIQTKFRDERRPRF-GVMRAREFCMMDAYSFDIDKAGLEKS 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            + +H+     +   G E   V   +      GS      AE+    +  + ++     I
Sbjct: 174 YQAMHDAYCKAFDRMGLEYRPVLADSGAIGGSGSQEFHVLAESGEDLIAFSTESDYAANI 233

Query: 464 NTGVLLGEGAFYG-PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
                         P  E  L D          ++       +         S++    +
Sbjct: 234 EKAEAAAPAGDRAEPTQEMTLVDTPNAKTIAELVEQFDLPIEKTVKTLFVKASDEVDADI 293

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
           I   + G  E     + E    NLP   +P
Sbjct: 294 IALIIRGDHE-----LNEVKAENLPQVAAP 318



 Score = 86.8 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 60/168 (35%), Gaps = 13/168 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           + R  + G I Q+        N   +    +    V++    +G  + R +   IE    
Sbjct: 405 LKRGIEVGHIFQLGNTYSEAMNCGVLGPDGKN---VILEMGCYGIGVSRVVASAIEQNHD 461

Query: 545 N----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                 P  L+P Q  +  +    +    E A+++   L +  + +  D R E       
Sbjct: 462 KYGIIWPDALAPFQVAIVPMNMHKSEEVKEAAEKLYAELTAMGIEVLFDDRKERPGVMFS 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  +  +P  I+ GD+   E +   +   S     V++ D +  +  +
Sbjct: 522 DMELIGVPHTIVIGDRSMKEGNFEYKNRRSGEKTAVAMADIVEHVKAQ 569


>gi|95930704|ref|ZP_01313437.1| prolyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
 gi|95133184|gb|EAT14850.1| prolyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
          Length = 571

 Score =  143 bits (361), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 50/222 (22%), Positives = 91/222 (40%), Gaps = 11/222 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           T+  L        ++E   H+ + R   +  +A    G+  +   G +  + +   +R +
Sbjct: 4   TEYLLPTLKENPADAEIVSHQLMMRAGMIRKVAA---GIYTYLPLGLRSIRKVEQIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P V+   LW++SG W+ Y   +  ++   DT      F L P +     
Sbjct: 61  MDRAGAMELLMPMVVPAGLWEESGRWEQYGKELLRIRDRKDT-----EFCLGPTHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            V    ++SYR+LP+ L +    +R+E      GLMR R F   DA+ F  ++   +   
Sbjct: 116 DVVRGTVRSYRQLPLNLYQIQGKFRDEIRPRF-GLMRGREFIMKDAYSFDLEDAGADTAY 174

Query: 406 -KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
            K++     I+K  G +   V+  T       S      AE+
Sbjct: 175 EKMYQAYQRIFKRCGLKFRAVEADTGNIGGSSSHEFMVLAES 216



 Score = 84.8 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 64/164 (39%), Gaps = 10/164 (6%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G +  +         A  +N+   K  P+++     G I R +   IE    +  
Sbjct: 403 RGIEVGHVFKLGTKYSEALGATVLNAEG-KEAPLVMGCYGIG-IGRTVAAAIEQNHDDQG 460

Query: 546 --LPLWLSPIQAIVTTITSSAVEYAQ---EIANLLKSHHLSIETDFRNETINYKIREHSI 600
              P+ ++P Q I+T +     +  Q   E+   L    + +  D R+E    K ++  +
Sbjct: 461 VIFPMPIAPFQVIITLLNPKDEQVMQAGSELYQQLMDAGVEVLLDDRDERPGSKFKDAEL 520

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
             IPI +  G++   E +  +++        + + + +  L  E
Sbjct: 521 IGIPIRVTVGNRALKEGAFEVQKRLEGERMMMPVAETLSWLVDE 564


>gi|254303428|ref|ZP_04970786.1| proline--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
 gi|148323620|gb|EDK88870.1| proline--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
          Length = 567

 Score =  143 bits (361), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 57/246 (23%), Positives = 99/246 (40%), Gaps = 11/246 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  +       +E+E   H+ + R   +  +A   SG+  +   G++  + + + +R 
Sbjct: 3   FSKAYIKTLKETPKEAEIASHKLMLRAGMIKKLA---SGIYAYLPLGYRTIKKIENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LWQ+SG WD   A M  +K      +  R F L P      
Sbjct: 60  EMDRAGALELLMPVVQPAELWQESGRWDVMGAEMLRLKD-----RHERDFVLSPTQEEMI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
            A+    + SY+ LP+ L    + +R+E      GLMR R FT  DA+ F T  E +  E
Sbjct: 115 TAIIRSDISSYKSLPINLYHIQTKFRDERRPRF-GLMRGREFTMKDAYSFHTSQESLDEE 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            L + +    I+   G +   V   +      GS      AE+    ++ +  +     I
Sbjct: 174 FLNMRDAYTRIFTRCGLKFRPVDADSGNIGGSGSQEFQVLAESGEDEIIYSDGSEYAANI 233

Query: 464 NTGVLL 469
              V  
Sbjct: 234 EKAVSE 239



 Score = 82.9 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 29/162 (17%), Positives = 65/162 (40%), Gaps = 9/162 (5%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  +CG I  +        NA Y++ + +  + +++     G        + +N   N  
Sbjct: 403 RGIECGQIFKLGDKYSKAMNATYLDENGKTQY-MLMGCYGIGVTRTMAAAIEQNNDENGI 461

Query: 548 LWLSPIQAIVTTITSS------AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W   I   +  +  +       V  A++I N L+   +    D R+E   +K ++  + 
Sbjct: 462 IWPVSIAPYIVDVIPANIKNEVQVNLAEKIYNELEEEKIDSMLDDRDEKPGFKFKDADLI 521

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             P  ++ G + A E  + ++   +  T +VS  + I  + +
Sbjct: 522 GFPFKVVVGKR-ADEGIVELKIRRTGETLEVSENEVIAKIKE 562


>gi|145803|gb|AAA23710.1| RNA synthesis factor (drpA) [Escherichia coli]
          Length = 516

 Score =  143 bits (361), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 43/198 (21%), Positives = 85/198 (42%), Gaps = 11/198 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGVRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E++ P V    LWQ+SG W+ Y   +       +     R F L P +    
Sbjct: 60  EMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGE-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY+ +P+   +  + +R+E      G+MR R F   DA+ F T ++   E 
Sbjct: 115 TDLIRNELSSYKHVPLNFYQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHTSQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFE 421
              ++     I+   G +
Sbjct: 174 YDAMYAAYSKIFSRMGLD 191



 Score = 51.7 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 20/124 (16%), Positives = 41/124 (33%), Gaps = 13/124 (10%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
           P  +   +  I R  + G I Q+         A             ++    +G  + R 
Sbjct: 394 PSPDGQGRLLIKRGIEVGHIFQLGTKYSEALKASVQGEDG---RNQILTMGCYGIGVTRV 450

Query: 535 IGIMIENFKGN----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDF 586
           +   IE          P  ++P Q  +  +         E A+++ + L++  + +  D 
Sbjct: 451 VAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLLDD 510

Query: 587 RNET 590
           R E 
Sbjct: 511 RKER 514


>gi|257065041|ref|YP_003144713.1| prolyl-tRNA synthetase, family II [Slackia heliotrinireducens DSM
           20476]
 gi|256792694|gb|ACV23364.1| prolyl-tRNA synthetase, family II [Slackia heliotrinireducens DSM
           20476]
          Length = 570

 Score =  143 bits (361), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 43/198 (21%), Positives = 81/198 (40%), Gaps = 8/198 (4%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYR 315
            I ++ +G+  +   G ++ + + + +R ++     EE+  P V    LW+QSG W +Y 
Sbjct: 40  MIRKEAAGLYSFLPLGLRVLRKIENIVREEMDSHGGEELLMPFVQSADLWRQSGRWGAYG 99

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
             M  ++   D       F L P        +  + L+SY++LP  L      +R+E   
Sbjct: 100 EEMMTMRDRHDN-----EFCLGPTAEEVITDLVKNELRSYKDLPKNLYHIQLKFRDERRP 154

Query: 376 SLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              GL+R R F   DA+ F    E +      + +    + +  G E  +V+        
Sbjct: 155 RF-GLLRSREFIMKDAYSFDKDQEGLEVNYQLMRDAYSRMCERMGMEYRIVQADPGEIGG 213

Query: 435 VGSDALWDDAENIMKGVL 452
            G++     AE     ++
Sbjct: 214 NGTEEFMTLAETGEAELV 231



 Score = 97.2 bits (240), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 22/160 (13%), Positives = 59/160 (36%), Gaps = 8/160 (5%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I  +         A +++    +  P ++     G        + ++      
Sbjct: 408 RGIEVGQIFKLGTKYSEAMGALFMDEDGTEK-PFIMGCYGVGVSRCMAAAVEQSHDDMGI 466

Query: 548 LWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W    +P    V  ++       E A+++A  L +  L +  D R+E    K  ++ + 
Sbjct: 467 IWPVGIAPAHVAVIPLSTKPDEVTEAAEDVAAKLAAAGLEVCIDDRDERAGVKFADNDLI 526

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
             P  ++ G +  +  ++ ++   +     V++ D +  +
Sbjct: 527 GWPAQVVIGKRGLAAGTVEVKNRKTGEKTDVAVDDVVSFV 566


>gi|229523326|ref|ZP_04412733.1| prolyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
 gi|229339689|gb|EEO04704.1| prolyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
          Length = 571

 Score =  143 bits (361), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 47/249 (18%), Positives = 94/249 (37%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +   L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R+
Sbjct: 3   TSNYLLSTLKETPNDAEVVSHKLMLRAGMIRKLA---SGLYTWLPTGLRVLRKVENIVRQ 59

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           +I      E   P V    LW+++G  +     +        T +  R F L P      
Sbjct: 60  EIDNAGAIETLMPVVQPFELWEETGRSEKMGPELLRF-----TDRHERPFVLSPTAEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
            A+  + + SY++LP+ L +  + +R+E      G+MR R F   DA+ F   +    + 
Sbjct: 115 TALVRNEVSSYKQLPLNLYQIQTKFRDERRPRF-GVMRAREFCMMDAYSFDIDKTGLEKS 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            + +H      +   G +   V   T      GS      AE+    +  + ++     I
Sbjct: 174 YEAMHVAYCKAFDRMGLDYRPVLADTGAIGGNGSHEFHVLAESGEDLIAFSTESDYAANI 233

Query: 464 NTGVLLGEG 472
                +   
Sbjct: 234 EKAEAVAPA 242



 Score = 86.4 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/166 (17%), Positives = 64/166 (38%), Gaps = 13/166 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           + R  + G I Q+  N   + N   ++S+ +    V++    +G  + R +   IE    
Sbjct: 405 LKRGIEVGHIFQLGTNYSEKMNCGVLDSNGKN---VILEMGCYGIGVSRVVAAAIEQNHD 461

Query: 545 N----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +     P  ++P Q  +  +    +    + A+++   L +  + +  D R E       
Sbjct: 462 DYGIIWPDAIAPFQVAIVPMNMHKSERVQQAAEKLYAELTAAGIEVLFDDRKERPGVMFS 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +  +  +P  II GD+   E     +   S   + V++   I  + 
Sbjct: 522 DMELIGVPHTIIIGDRSMDEGHFEYKNRRSGEKEAVAMASIIDFIQ 567


>gi|261253697|ref|ZP_05946270.1| prolyl-tRNA synthetase [Vibrio orientalis CIP 102891]
 gi|260937088|gb|EEX93077.1| prolyl-tRNA synthetase [Vibrio orientalis CIP 102891]
          Length = 571

 Score =  143 bits (361), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 46/249 (18%), Positives = 94/249 (37%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +   L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R+
Sbjct: 3   TSNYLLSTLKETPNDAEVVSHQLMLRAGMIRKLA---SGLYTWLPTGLRVLRKVENIVRQ 59

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           +I      E   P V    LW+++G  +     +        T +  R F L P      
Sbjct: 60  EIDNAGAVETLMPVVQPFELWEETGRSEKMGPELLRF-----TDRHTRPFVLSPTAEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
            ++  + + SY++LP+ L +  + +R+E      G+MR R F   DA+ F   +    + 
Sbjct: 115 TSLVRNEVSSYKQLPLNLYQIQTKFRDERRPRF-GVMRAREFCMMDAYSFDIDKSGLEKS 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            + +H+     +   G E   V   +      GS      AE+    +  + ++     I
Sbjct: 174 YQAMHDAYCKAFDRMGLEYRPVLADSGAIGGSGSQEFHVLAESGEDLIAFSTESDYAANI 233

Query: 464 NTGVLLGEG 472
                    
Sbjct: 234 EKAEAAAPA 242



 Score = 87.5 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 60/168 (35%), Gaps = 13/168 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           + R  + G I Q+        N   +    +    V++    +G  + R +   IE    
Sbjct: 405 LKRGIEVGHIFQLGNTYSQAMNCGVLGPDGKN---VILEMGCYGIGVSRVVASAIEQNHD 461

Query: 545 N----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                 P  L+P Q  +  +    +    E A+++   L +  + +  D R E       
Sbjct: 462 KYGIIWPDALAPFQVAIVPMNMHKSEEVKEAAEKLYAELTAMGIEVLFDDRKERPGVMFS 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  +  IP  I+ GD+   E +   +   +     V++ D +  +  +
Sbjct: 522 DMELIGIPHTIVIGDRSMKEGNFEYKNRRNGEKTAVAMADIVEHIKAQ 569


>gi|323181612|gb|EFZ67027.1| prolyl-tRNA synthetase [Escherichia coli 1357]
          Length = 547

 Score =  143 bits (361), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 45/218 (20%), Positives = 87/218 (39%), Gaps = 8/218 (3%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
            I +  SG+  W   G ++ + + + +R ++ +    E++ P V    LWQ+SG W+ Y 
Sbjct: 6   MIRKLASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGRWEQYG 65

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
             +       +     R F L P +      +  + L SY++LP+   +  + +R+E   
Sbjct: 66  PELLRFVDRGE-----RPFVLGPTHEEVITDLIRNELSSYKQLPLNFYQIQTKFRDEVRP 120

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              G+MR R F   DA+ F T ++   E    ++     I+   G +   V+  T     
Sbjct: 121 RF-GVMRSREFLMKDAYSFHTSQESLQETYDAMYAAYSKIFSRMGLDFRAVQADTGSIGG 179

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
             S      A++    V+ +  +     I     +   
Sbjct: 180 SASHEFQVLAQSGEDDVVFSDTSDYAANIELAEAIAPK 217



 Score = 86.4 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 59/178 (33%), Gaps = 13/178 (7%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
           P  +      I R  + G I Q+         A             ++    +G  + R 
Sbjct: 370 PSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDG---RNQILTMGCYGIGVTRV 426

Query: 535 IGIMIENFKGN----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDF 586
           +   IE          P  ++P Q  +  +         E A+++ + L++  + +  D 
Sbjct: 427 VAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLLDD 486

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R E       +  +  IP  I+ GD+      I  +   +   Q +   D +  L K+
Sbjct: 487 RKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVEYLVKQ 544


>gi|238926724|ref|ZP_04658484.1| proline--tRNA ligase [Selenomonas flueggei ATCC 43531]
 gi|238885256|gb|EEQ48894.1| proline--tRNA ligase [Selenomonas flueggei ATCC 43531]
          Length = 570

 Score =  143 bits (361), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 47/221 (21%), Positives = 85/221 (38%), Gaps = 11/221 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            T            E+E   H+ + R   +    +   G+  +    W+  + +   +R 
Sbjct: 3   ATNLYAPTLRNTPAEAEIASHQLMYRAGLIR---KSAGGMYTYLPLAWRTIRKIEQIIRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +EI  P +    LW++SG W +Y A M  VK      +  R F + P +    
Sbjct: 60  EMDAAGGQEIMMPILQPSELWEESGRWGAYGAEMIRVKD-----RHGREFCMGPTHEEMI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
            A+    ++SY++LP+ L +    +R+E      G+MR R F   D + F       NE 
Sbjct: 115 TALVRDEVRSYKQLPLMLYQIQDKFRDERRPRF-GVMRSREFIMKDLYSFDKDIAGMNES 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
             K+     +I+   G     V+  +       S+     A
Sbjct: 174 YRKMSVAYTNIFTRCGLNFRAVEADSGAIGGGHSEEFTVLA 214



 Score = 82.1 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 27/150 (18%), Positives = 49/150 (32%), Gaps = 6/150 (4%)

Query: 486 AIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
            IGR  + G I       S+         + K  P+ +     G        + +N   +
Sbjct: 402 HIGRGIEAGQIFALGTKYSKAMGATFLDEAGKTQPLQMGCYGIGVGRTMAAAIEQNHDEH 461

Query: 546 LPLWLSPIQAI------VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
             +W   I         V       + YA+E+   L++  + +  D R E    K  +  
Sbjct: 462 GIIWPRAIAPYEVVVVAVNAKAEEQLAYAEEVYEELRAAGVDVLLDDRRERAGVKFNDCD 521

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           +   P+ I  G K     +I ++   S   
Sbjct: 522 LIGYPVRIAIGPKTIENGTIEVKIRKSGAL 551


>gi|329956635|ref|ZP_08297208.1| phosphoribulokinase/uridine kinase family protein [Bacteroides
           clarus YIT 12056]
 gi|328524007|gb|EGF51083.1| phosphoribulokinase/uridine kinase family protein [Bacteroides
           clarus YIT 12056]
          Length = 557

 Score =  143 bits (361), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 47/241 (19%), Positives = 98/241 (40%), Gaps = 3/241 (1%)

Query: 1   MPSDIKLTFPDGSI-KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-S 58
           M   +++   + +I K FP+ ++  D+    + +     V+  +N +   L+  V     
Sbjct: 1   MKHMLQICCKNNNISKEFPIGSSLLDIYYGFNLNFPYPVVSAKVNNRSEGLNFRVYNNKD 60

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           +E +   D   +     S   I+ +AV  ++PE ++ +   +  G++ +    +P   ++
Sbjct: 61  VEFLDVRDSSGMRTYVRSLCFILYKAVSELFPEGKLFVEHPVSKGYFCNLRIGRPIELED 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           ++ I+K+MQEIIA D PF +      +A  +F  +    KV++LE+         Y  G+
Sbjct: 121 VSAIKKRMQEIIAEDIPFRRTECHTTEAVRVFSERGMNDKVKLLET-SGSLYTYYYTLGD 179

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             D   G  +  TG +K F  +    G   R  +                 ++ +     
Sbjct: 180 TVDYYYGNLLPGTGFIKLFDIVKYYDGLLLRIPNKENPTVLEEVVKQEKMLDVFKEHLRW 239

Query: 239 E 239
            
Sbjct: 240 N 240


>gi|309787126|ref|ZP_07681738.1| prolyl-tRNA synthetase [Shigella dysenteriae 1617]
 gi|308924704|gb|EFP70199.1| prolyl-tRNA synthetase [Shigella dysenteriae 1617]
          Length = 547

 Score =  143 bits (361), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 45/218 (20%), Positives = 87/218 (39%), Gaps = 8/218 (3%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
            I +  SG+  W   G ++ + + + +R ++ +    E++ P V    LWQ+SG W+ Y 
Sbjct: 6   MIRKLASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGRWEQYG 65

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
             +       +     R F L P +      +  + L SY++LP+   +  + +R+E   
Sbjct: 66  PELLRFVDRGE-----RPFVLGPTHEEVITDLIRNELSSYKQLPLNFYQIQTKFRDEVRP 120

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              G+MR R F   DA+ F T ++   E    ++     I+   G +   V+  T     
Sbjct: 121 RF-GVMRSREFLMKDAYSFHTSQESLQETYDAMYAAYSKIFSRMGLDFRAVQADTGSIGG 179

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
             S      A++    V+ +  +     I     +   
Sbjct: 180 SASHEFQVLAQSGEDDVVFSDTSDYAANIELAEAIAPK 217



 Score = 86.4 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 59/178 (33%), Gaps = 13/178 (7%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
           P  +      I R  + G I Q+         A             ++    +G  + R 
Sbjct: 370 PSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDG---RNQILTMGCYGIGVTRV 426

Query: 535 IGIMIENFKGN----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDF 586
           +   IE          P  ++P Q  +  +         E A+++ + L++  + +  D 
Sbjct: 427 VAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLLDD 486

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R E       +  +  IP  I+ GD+      I  +   +   Q +   D +  L K+
Sbjct: 487 RKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVEYLVKQ 544


>gi|194246824|ref|YP_002004463.1| prolyl-tRNA synthetase [Candidatus Phytoplasma mali]
 gi|193807181|emb|CAP18622.1| Prolyl-tRNA synthetase [Candidatus Phytoplasma mali]
          Length = 473

 Score =  143 bits (361), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 64/408 (15%), Positives = 158/408 (38%), Gaps = 55/408 (13%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           + +  +  + +L   + D  G I +   G+ +++ +  +  ++++  +++ +  P +  +
Sbjct: 18  KWYTDVCVKGELIAYS-DVKGFIIYLPDGYFLWEQIQKFFNKELQKTNHQNVYFPLLFTE 76

Query: 303 HLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
           +L++ +  H   ++     V  A D         L+P +       +   + SYR+LP  
Sbjct: 77  NLFKKEKKHIQGFQPETAFVTFAGDKNL-SEKLILRPTSEVLFSQHYEKTITSYRDLPKL 135

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGF 420
             ++ +V R E S      +R + F   + H      ++  +E L I  L   + K+   
Sbjct: 136 YNQWCNVIRWEKS--TRPFLRGKEFLWQEGHTAHANAQEAMSETLSIIKLYQKLGKELLA 193

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
              ++   T  EK  G+   +          ++++    Q      +  G   F G KF 
Sbjct: 194 IPFVIGKKTELEKFAGAIETYS---------IESLMPDGQ-----SLQSGTSHFLGTKFS 239

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI- 539
                                    FN  + +  ++      +++  +G   R +G ++ 
Sbjct: 240 -----------------------EAFNIKFQDLDNKIK---FVYQTSWGISTRLLGALVM 273

Query: 540 ---ENFKGNLPLWLSPIQAIVTTITSS---AVEYAQEIANLLKSHHLSIETDFRNETINY 593
              ++     P +++P+Q I+  +       ++++ EI  +LK+    ++ D +N+   +
Sbjct: 274 VHGDDEGLVFPPYIAPLQIIIIPLQPKDANVIKFSNEIFEVLKNK-YRVKLDVQNKNTGW 332

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           K  ++ +K IP+ I  G     +  I +    +   Q+    D +  +
Sbjct: 333 KFSQYEMKGIPLRIEVGKHGLEKDEITVFTRYNFLKQQFKKDDLLTKI 380


>gi|65317824|ref|ZP_00390783.1| COG0442: Prolyl-tRNA synthetase [Bacillus anthracis str. A2012]
          Length = 383

 Score =  143 bits (361), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 64/304 (21%), Positives = 120/304 (39%), Gaps = 56/304 (18%)

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH-VFCTKEQMFNECLKIHNLI 411
           +SY +LP    ++ SV R E   +    +R   F   + H +  T E+   E L I NL 
Sbjct: 2   QSYNDLPKLYNQWCSVVRWEK--TTRPFLRTTEFLWQEGHTIHETAEESQAETLNILNLY 59

Query: 412 ISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
            S  +D+    ++    T  EK  G+ A +                              
Sbjct: 60  ASFCEDYLAIPVIKGQKTEKEKFAGAKATY------------------------------ 89

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
                   E ++ D  G+  Q GT      N    F+  +++ + +  +   +H+  +G 
Sbjct: 90  ------TIESLMHD--GKALQTGTSHNFGTNFSEAFDIKFLDRNGKWQY---VHQTSWGV 138

Query: 531 IERFIGIMI----ENFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIE 583
             R IG +I    +N    +P  ++P+Q ++  I       +  A E+   ++     ++
Sbjct: 139 STRMIGGLIMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLAKATELQGHIQKV-ARVK 197

Query: 584 TDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS---LLDAIPI 640
            D  N+T  +K  E+ +K IPI +  G K+  +  + + R  +   + +S   L + IP 
Sbjct: 198 IDASNKTPGWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRRDTKEKEFISMDQLEERIPA 257

Query: 641 LTKE 644
           L +E
Sbjct: 258 LLEE 261


>gi|50751644|ref|XP_422493.1| PREDICTED: similar to Prolyl-tRNA synthetase
           (mitochondrial)(putative) [Gallus gallus]
          Length = 470

 Score =  143 bits (361), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 78/422 (18%), Positives = 147/422 (34%), Gaps = 33/422 (7%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           R HR + +      I     G         +  + LI  +   +++   +++N P +   
Sbjct: 64  RSHRLMLQGG---LIHPASPGCYHLLPPAVRSMEKLIRLIDGAMRNIGGQKVNMPSLSSA 120

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN-HGLKSYRELPVR 361
            LW+ SG W+     +F +       +  + + L P +      +   H   SYR+LP+R
Sbjct: 121 ELWRTSGRWEQMGPELFRL-----ADRHGKEYCLGPTHEEAVTELVAAHSNLSYRQLPLR 175

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKDFGF 420
           L +    +R+EP     GL+R R F   D + F   E+      ++      S++K  G 
Sbjct: 176 LYQVTRKFRDEPKPRF-GLLRSREFYMKDMYTFDASEEAARHTYELVCTAYRSLFKRLGL 234

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
             + V+ +T       S      A +I +  L              V   + A   P   
Sbjct: 235 RCVQVRAATGTIGGTASHEFQLPA-DIGEDRLVLCPAGHFAANVEMVDEEQTA--CPACG 291

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
             L  + G +    T  +     S  NA +    ++     M      G   R +   IE
Sbjct: 292 EKLTQSRGIEV-GHTFYLGTKYSSVHNAAFYTPENKLQLAEM-GCYGLGVT-RILAASIE 348

Query: 541 ----NFKGNLPLWLSPIQAIVTTITSSAVE---------YAQEIANLLKSHHLSIETDFR 587
                     P  ++P Q         + E            ++A  L      +  D R
Sbjct: 349 VLSTEDSIRWPSLIAPYQVCFIPPKKGSREERGAALLEHLYDDVAEALPRLAGDVVLDDR 408

Query: 588 NE-TINYKIREHSIKKIPIIIICGDKEASERSI-GIRRFGSTTTQKVSLLDAIPILTKES 645
            + TI  ++++ +    P +++ G +   +  +  +    S T   ++    I +L+K  
Sbjct: 409 TQMTIGKRLKDANKLGYPYVVVAGRRVCEDPPVFEVWDQSSGTVLYLTKEGVIELLSKVQ 468

Query: 646 LP 647
           LP
Sbjct: 469 LP 470


>gi|262165127|ref|ZP_06032864.1| prolyl-tRNA synthetase [Vibrio mimicus VM223]
 gi|262172111|ref|ZP_06039789.1| prolyl-tRNA synthetase [Vibrio mimicus MB-451]
 gi|261893187|gb|EEY39173.1| prolyl-tRNA synthetase [Vibrio mimicus MB-451]
 gi|262024843|gb|EEY43511.1| prolyl-tRNA synthetase [Vibrio mimicus VM223]
          Length = 571

 Score =  143 bits (361), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 47/241 (19%), Positives = 95/241 (39%), Gaps = 11/241 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R+
Sbjct: 3   TSKYLLSTLKETPNDAEVVSHKLMLRAGMIRKLA---SGLYTWLPTGLRVLRKVENIVRQ 59

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           +I      E   P V    LW+++G  +     +        T +  R F L P      
Sbjct: 60  EIDNAGAIETLMPVVQPFELWEETGRSEKMGPELLRF-----TDRHERPFVLSPTAEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
            A+  + + SY++LP+ L +  + +R+E      G+MR R F+  DA+ F    E +   
Sbjct: 115 TALVRNEVSSYKQLPLNLYQIQTKFRDERRPRF-GVMRAREFSMMDAYSFDIDKEGLQKS 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +H      +   G +   V   +      GS      AE+    ++ + ++     I
Sbjct: 174 YDAMHAAYCKAFDRMGLDYRPVLADSGAIGGNGSQEFHVLAESGEDLIVFSTESDYAANI 233

Query: 464 N 464
            
Sbjct: 234 E 234



 Score = 86.4 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 28/166 (16%), Positives = 65/166 (39%), Gaps = 13/166 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           + R  + G I Q+  N  ++ N   ++S+ +    V++    +G  + R +   IE    
Sbjct: 405 LKRGIEVGHIFQLGTNYSAKMNCGVLDSNGKN---VILEMGCYGIGVSRVVAAAIEQNHD 461

Query: 545 N----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +     P  ++P Q  +  +    +    E A+++   L +  + +  D R E       
Sbjct: 462 DYGIIWPDAIAPFQVAIVPMNMHKSERVQEAAEKLYAELTAAGIEVLFDDRKERPGVMFS 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +  +  +P  +I GD+   E     +   +   + V++   I  + 
Sbjct: 522 DMELIGVPHTVIIGDRSMDEGHFEYKNRRNGEKEAVAMESIIDFIQ 567


>gi|312970296|ref|ZP_07784478.1| prolyl-tRNA synthetase [Escherichia coli 1827-70]
 gi|110613794|gb|ABF02461.1| proline tRNA synthetase [Shigella flexneri 5 str. 8401]
 gi|310337794|gb|EFQ02905.1| prolyl-tRNA synthetase [Escherichia coli 1827-70]
 gi|313646744|gb|EFS11203.1| prolyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|323160236|gb|EFZ46194.1| prolyl-tRNA synthetase [Escherichia coli E128010]
 gi|332098769|gb|EGJ03729.1| prolyl-tRNA synthetase [Shigella boydii 3594-74]
 gi|332762199|gb|EGJ92468.1| prolyl-tRNA synthetase [Shigella flexneri 4343-70]
          Length = 547

 Score =  143 bits (361), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 45/218 (20%), Positives = 87/218 (39%), Gaps = 8/218 (3%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
            I +  SG+  W   G ++ + + + +R ++ +    E++ P V    LWQ+SG W+ Y 
Sbjct: 6   MIRKLASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGRWEQYG 65

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
             +       +     R F L P +      +  + L SY++LP+   +  + +R+E   
Sbjct: 66  PELLRFVDRGE-----RPFVLGPTHEEVITDLIRNELSSYKQLPLNFYQIQTKFRDEVRP 120

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              G+MR R F   DA+ F T ++   E    ++     I+   G +   V+  T     
Sbjct: 121 RF-GVMRSREFLMKDAYSFHTSQESLQETYDAMYAAYSKIFSRMGLDFRAVQADTGSIGG 179

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
             S      A++    V+ +  +     I     +   
Sbjct: 180 SASHEFQVLAQSGEDDVVFSDTSDYAANIELAEAIAPK 217



 Score = 86.4 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 59/178 (33%), Gaps = 13/178 (7%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
           P  +      I R  + G I Q+         A             ++    +G  + R 
Sbjct: 370 PSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDG---RNQILTMGCYGIGVTRV 426

Query: 535 IGIMIENFKGN----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDF 586
           +   IE          P  ++P Q  +  +         E A+++ + L++  + +  D 
Sbjct: 427 VAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLLDD 486

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R E       +  +  IP  I+ GD+      I  +   +   Q +   D +  L K+
Sbjct: 487 RKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVEYLVKQ 544


>gi|320155572|ref|YP_004187951.1| prolyl-tRNA synthetase [Vibrio vulnificus MO6-24/O]
 gi|319930884|gb|ADV85748.1| prolyl-tRNA synthetase [Vibrio vulnificus MO6-24/O]
          Length = 571

 Score =  143 bits (361), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 55/301 (18%), Positives = 111/301 (36%), Gaps = 13/301 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R+
Sbjct: 3   TSKYLLSTLKETPNDAEVVSHQLMLRAGMIRKLA---SGLYTWLPTGLRVLRKVENIVRQ 59

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           +I      E   P V    LW+++G  +     +        T + +R F L P      
Sbjct: 60  EIDNAGAIETLMPVVQPFELWEETGRSEKMGPELLRF-----TDRHVRPFVLSPTAEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
            A+  + + SY++LP+ L +  + +R+E      G+MR R F   DA+ F   +    + 
Sbjct: 115 TALVRNEVSSYKQLPINLYQIQTKFRDERRPRF-GVMRAREFCMMDAYSFDIDKAGLEKS 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            + +H+     +   G E   V   +      GS      AE+    +  + ++     I
Sbjct: 174 YQAMHDAYCKAFDRMGLEYRPVLADSGAIGGNGSQEFHVLAESGEDLIAFSTESDYAANI 233

Query: 464 NTGVLLGEGAFY-GPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPV 521
                +        P  E  L D          + Q    +       +V +  E   P+
Sbjct: 234 EKAEAVAPAVERAAPTQEMTLVDTPNAKTIAELVEQHGIAIEKTVKTLFVKASDEIDAPI 293

Query: 522 M 522
           +
Sbjct: 294 V 294



 Score = 85.2 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 62/168 (36%), Gaps = 13/168 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           + R  + G I Q+        N   ++S+ +    V++    +G  + R +   IE    
Sbjct: 405 LKRGIEVGHIFQLGNVYSEAMNCGVLDSNGKN---VILEMGCYGIGVSRVVAAAIEQNND 461

Query: 545 N----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                 P  L+P Q  +  +    +    E A+++   L +  + +  D R E       
Sbjct: 462 KYGIIWPDALAPFQVAIVPMNMHKSERVQEAAEKLYAELTAMGIEVLFDDRKERPGVMFS 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  +  IP  I+ GD+   E     +   S     V++ D +  +  +
Sbjct: 522 DMELIGIPHTIVIGDRSMDEGHFEYKNRRSGEKTPVAMADIVEHIKAQ 569


>gi|289578756|ref|YP_003477383.1| phosphoribulokinase/uridine kinase [Thermoanaerobacter italicus
           Ab9]
 gi|289528469|gb|ADD02821.1| phosphoribulokinase/uridine kinase [Thermoanaerobacter italicus
           Ab9]
          Length = 547

 Score =  143 bits (361), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 49/236 (20%), Positives = 90/236 (38%), Gaps = 3/236 (1%)

Query: 12  GSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSL 70
           G+I  +P      D+A+          VA  ++ ++ DL+  V ++ ++E +        
Sbjct: 7   GNIYEYPEGTKLEDIAKDFEHVYNGIIVAAKVDNELKDLNCTVSKDSTVEFVDTTIEEGT 66

Query: 71  AVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEII 130
            + R S   +  +AV+ + P   V I   +  G Y +       ++  ++ I+K+M+EII
Sbjct: 67  RIYRRSLTFVFIKAVKELLPGATVTIEHSLGKGLYCEIHG-YSLNNKIVSMIKKRMEEII 125

Query: 131 ARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRS 190
            +D    ++ L  E+A +LFE +    KV + +    KE V +Y      D    P V S
Sbjct: 126 EKDFKIERKMLPKEEAIKLFEKEGLTEKVRLFKD-TNKEKVPVYYCDGTVDFFYSPCVPS 184

Query: 191 TGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDH 246
           TG +K F       G            S            + +            +
Sbjct: 185 TGYLKVFDIRFYFPGVILIAPDVYNPRSLPVFVDVPKLAYIFKEAEDWASILNISY 240


>gi|153216557|ref|ZP_01950520.1| prolyl-tRNA synthetase [Vibrio cholerae 1587]
 gi|153830554|ref|ZP_01983221.1| prolyl-tRNA synthetase [Vibrio cholerae 623-39]
 gi|124114232|gb|EAY33052.1| prolyl-tRNA synthetase [Vibrio cholerae 1587]
 gi|148873952|gb|EDL72087.1| prolyl-tRNA synthetase [Vibrio cholerae 623-39]
          Length = 571

 Score =  143 bits (361), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 47/249 (18%), Positives = 94/249 (37%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +   L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R+
Sbjct: 3   TSNYLLSTLKETPNDAEVVSHKLMLRAGMIRKLA---SGLYTWLPTGLRVLRKVENIVRQ 59

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           +I      E   P V    LW+++G  +     +        T +  R F L P      
Sbjct: 60  EIDNAGAIETLMPVVQPFELWEETGRSEKMGPELLRF-----TDRHERPFVLSPTAEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
            A+  + + SY++LP+ L +  + +R+E      G+MR R F   DA+ F   +    + 
Sbjct: 115 TALVRNEVSSYKQLPLNLYQIQTKFRDERRPRF-GVMRAREFCMMDAYSFDIDKAGLEKS 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            + +H      +   G +   V   T      GS      AE+    +  + ++     I
Sbjct: 174 YEAMHVAYCKAFDRMGLDYRPVLADTGAIGGNGSHEFHVLAESGEDLIAFSTESDYAANI 233

Query: 464 NTGVLLGEG 472
                +   
Sbjct: 234 EKAEAVAPA 242



 Score = 86.4 bits (212), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/166 (17%), Positives = 64/166 (38%), Gaps = 13/166 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           + R  + G I Q+  N   + N   ++S+ +    V++    +G  + R +   IE    
Sbjct: 405 LKRGIEVGHIFQLGTNYSEKMNCGVLDSNGKN---VILEMGCYGIGVSRVVAAAIEQNHD 461

Query: 545 N----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +     P  ++P Q  +  +    +    + A+++   L +  + +  D R E       
Sbjct: 462 DYGIIWPDAIAPFQVAIVPMNMHKSERVQQAAEKLYAELTAAGIEVLFDDRKERPGVMFS 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +  +  +P  II GD+   E     +   S   + V++   I  + 
Sbjct: 522 DMELIGVPHTIIIGDRSMDEGHFEYKNRRSGEKEAVAMASIIDFIQ 567


>gi|258625204|ref|ZP_05720117.1| prolyl-tRNA synthetase [Vibrio mimicus VM603]
 gi|258582494|gb|EEW07330.1| prolyl-tRNA synthetase [Vibrio mimicus VM603]
          Length = 571

 Score =  143 bits (361), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 47/241 (19%), Positives = 95/241 (39%), Gaps = 11/241 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R+
Sbjct: 3   TSKYLLSTLKETPNDAEVVSHKLMLRAGMIRKLA---SGLYTWLPTGLRVLRKVENIVRQ 59

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           +I      E   P V    LW+++G  +     +        T +  R F L P      
Sbjct: 60  EIDNAGAIETLMPVVQPFELWEETGRSEKMGPELLRF-----TDRHERPFVLSPTAEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
            A+  + + SY++LP+ L +  + +R+E      G+MR R F+  DA+ F    E +   
Sbjct: 115 TALVRNEVSSYKQLPLNLYQIQTKFRDERRPRF-GVMRAREFSMMDAYSFDIDKEGLQKS 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +H      +   G +   V   +      GS      AE+    ++ + ++     I
Sbjct: 174 YDAMHAAYCKAFDRMGLDYRPVLADSGAIGGNGSQEFHVLAESGEDLIVFSTESDYAANI 233

Query: 464 N 464
            
Sbjct: 234 E 234



 Score = 85.2 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 27/166 (16%), Positives = 64/166 (38%), Gaps = 13/166 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           + R  + G I Q+  N  ++ N   ++S+ +     ++    +G  + R +   IE    
Sbjct: 405 LKRGIEVGHIFQLGTNYSAKMNCGVLDSNGKNA---ILEMGCYGIGVSRVVAAAIEQNHD 461

Query: 545 N----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +     P  ++P Q  +  +    +    E A+++   L +  + +  D R E       
Sbjct: 462 DYGIIWPDAIAPFQVAIVPMNMHKSERVQEAAEKLYAELTAAGIEVLFDDRKERPGVMFS 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +  +  +P  +I GD+   E     +   +   + V++   I  + 
Sbjct: 522 DMELIGVPHTVIIGDRSMDEGHFEYKNRRNGEKEAVAMESIIDFIQ 567


>gi|114152274|sp|Q3SH24|SYP_THIDA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
          Length = 576

 Score =  143 bits (361), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 49/221 (22%), Positives = 86/221 (38%), Gaps = 11/221 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            TQ  L+       E+E   H+ + R   +  +   GSG+  W   G ++ + + + +R 
Sbjct: 3   TTQFFLSTTKEAPSEAELVSHKLMLRAGLIKRL---GSGLYTWMPLGLRVLRRVEAVVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LWQ++G W  +   M  +K      +  R F   P +    
Sbjct: 60  EMNRAGAIELLMPAVQPAELWQETGRWAQFGPQMLKIKD-----RHEREFCFGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
             +    +KSYR+LP+   +  + +R+E      G+MR R F   DA+ F    E +   
Sbjct: 115 TDLARREIKSYRQLPLNFYQIQTKFRDEIRPRF-GVMRAREFLMKDAYSFHASRESLAAT 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
              +++    I+   G     V   T       S      A
Sbjct: 174 YQAMYDAYGRIFTRLGLRFRAVAADTGAIGGSASHEFHVLA 214



 Score = 67.9 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 26/166 (15%), Positives = 60/166 (36%), Gaps = 14/166 (8%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G + Q+        NA Y++    K   + +     G        + +N  G   
Sbjct: 406 RGIEVGHVFQLGNKYSQAMNATYLDEAG-KAQAMEMGCYGIGVSRIVAAAVEQNHDGKGI 464

Query: 548 LW---LSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +W   ++P   ++  I    ++S    A  +   L +  + +  D R+E       +  +
Sbjct: 465 VWPASMAPFSVVIVAIGYGKSASVKNAADTLYADLMAVGVEVLLDDRDERPGVMFADAEL 524

Query: 601 KKIPIIIICGDKEASERSIGIRRFG-----STTTQKVSLLDAIPIL 641
             IP  +  G++  +E  +  +            +K+++ +A   L
Sbjct: 525 VGIPHRVTLGERGLNEGVVEYQPRRAAPEQGADARKIAVAEAKAFL 570


>gi|302558076|ref|ZP_07310418.1| prolyl-tRNA synthetase [Streptomyces griseoflavus Tu4000]
 gi|302475694|gb|EFL38787.1| prolyl-tRNA synthetase [Streptomyces griseoflavus Tu4000]
          Length = 566

 Score =  143 bits (361), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 45/265 (16%), Positives = 97/265 (36%), Gaps = 14/265 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q           ++E   H+ L R   +   A    G+  W   G K+   +   +R +
Sbjct: 10  SQLMAKTLRDDPADAEVLSHKLLVRAGYVRRTAA---GIWTWLPLGKKVLANVERIVREE 66

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E+  P +L +  ++ +G WD Y   +F ++      +    + L P +     
Sbjct: 67  MDAIGAQEVLLPALLPREPYEATGRWDEYGPELFRLQD-----RKGGDYLLGPTHEEIFT 121

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +      SY++LPV L +  S YR+E      G++R R F   D++ F  +++   +  
Sbjct: 122 LMVKDQASSYKDLPVILYQIQSKYRDEARPR-AGILRGREFLMKDSYSFDLEDEGLAKSY 180

Query: 406 KIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIK---NSSQD 461
            +H      +++  G +  +   +        S+     AE       D       ++ +
Sbjct: 181 ALHRAAYQKVFERLGLDYRICAATAGAMGGSKSEEFLAPAEAGEDTFADCPNCDFAANTE 240

Query: 462 RINTGVLLGEGAFYGPKFEYILKDA 486
            I+  +   +        +    D 
Sbjct: 241 AISYELKPVDATAVPAAEDIPTPDT 265



 Score = 85.6 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 64/163 (39%), Gaps = 10/163 (6%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           + R  + G I Q+            +  + +     M    +   + R +  + E    +
Sbjct: 406 LDRAIEIGHIFQLGRKYADALKLDVLGQNGKPVRVTMGSYGI--GVSRAVAALAEQTADD 463

Query: 546 LPL-WLSPIQA----IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHS 599
             L W + +      +V    +   E A E++  L +  L +  D R   +   K  +  
Sbjct: 464 KGLCWPAEVAPADVHVVAAGKALQTELALEVSEKLSAAGLRVLVDDRPGVSPGVKFTDSE 523

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +  +P I++ G + A+E  + ++   +   +++++ +A+  LT
Sbjct: 524 LIGVPQILVAGRR-AAEGVVELKDRRTGEREELTIEEALTRLT 565


>gi|323176512|gb|EFZ62104.1| prolyl-tRNA synthetase [Escherichia coli 1180]
          Length = 547

 Score =  143 bits (360), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 45/218 (20%), Positives = 87/218 (39%), Gaps = 8/218 (3%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
            I +  SG+  W   G ++ + + + +R ++ +    E++ P V    LWQ+SG W+ Y 
Sbjct: 6   MIRKLASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGRWEQYG 65

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
             +       +     R F L P +      +  + L SY++LP+   +  + +R+E   
Sbjct: 66  PELLRFVDRGE-----RPFVLGPTHEEVITDLIRNELSSYKQLPLNFYQIQTKFRDEVRP 120

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              G+MR R F   DA+ F T ++   E    ++     I+   G +   V+  T     
Sbjct: 121 RF-GVMRSREFLMKDAYSFHTSQESLQETYDAMYAAYSKIFSRMGLDFRAVQADTGSIGG 179

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
             S      A++    V+ +  +     I     +   
Sbjct: 180 SASHEFQVLAQSGEDDVVFSDTSDYAANIELAEAIAPK 217



 Score = 87.1 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 31/178 (17%), Positives = 59/178 (33%), Gaps = 13/178 (7%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
           P  +      I R  + G I Q+         A             ++    +G  + R 
Sbjct: 370 PSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDG---RNQILTMGCYGIGVTRV 426

Query: 535 IGIMIENFKGN----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDF 586
           +   IE          P  ++P Q  +  +         E A+++ + L++  + +  D 
Sbjct: 427 VAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLLDD 486

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           R E       +  +  IP  I+ GD+      I  +   +   Q +   D I  L K+
Sbjct: 487 RKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIIEYLVKQ 544


>gi|262371768|ref|ZP_06065047.1| prolyl-tRNA synthetase [Acinetobacter junii SH205]
 gi|262311793|gb|EEY92878.1| prolyl-tRNA synthetase [Acinetobacter junii SH205]
          Length = 571

 Score =  143 bits (360), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 47/250 (18%), Positives = 98/250 (39%), Gaps = 13/250 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++           ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   ASRFLFATLRETPNDAEVISHQLMLRAGMIRKLA---SGLYSWLPMGTRVLKKVDAIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P      LW++SG ++ Y   +   K      +    F L P +    
Sbjct: 60  EMNRSGALEVFMPVTQPAALWEESGRFEQYGPELLRFKD-----RHTNDFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + LKSY++LP+   +  + +R+E      G+MR R F   DA+ F   ++   E 
Sbjct: 115 TDLARNELKSYKQLPLNFYQIQTKFRDEIRPRF-GVMRSREFIMKDAYSFHANQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +++    I+   G +   V+  T       S      A +    +  + ++     +
Sbjct: 174 YDVMYDTYSRIFTRLGLDFRPVQADTGSIGGSASHEFHVLASSGEDDIAFSTESDYAANV 233

Query: 464 N--TGVLLGE 471
                VL+GE
Sbjct: 234 EMAEAVLVGE 243



 Score = 94.5 bits (233), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 59/166 (35%), Gaps = 13/166 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           I R  + G I Q+            +    +   P  +    +G  + R +   IE NF 
Sbjct: 408 IKRGIEVGHIFQLGTKYSEALGCKVLGEDGK---PFTVTMGCYGIGVTRVVAAAIEQNFD 464

Query: 544 GNLPLWL---SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
               +W    +P +  +  +    +   +E A+ +   L++    +  D RNE    K  
Sbjct: 465 DKGIIWPQAIAPFEVAIVPMNAHKSPRTLEAAEALYAELQAQGYDVLLDDRNERPGVKFS 524

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +  +  IP  I+ G+K     +   +      +  +S  + I  L 
Sbjct: 525 DLELMGIPHRIVIGEKGLDAGTFEYKGRRDEESTNLSKEELIKKLA 570


>gi|114777677|ref|ZP_01452637.1| prolyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1]
 gi|114551893|gb|EAU54427.1| prolyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1]
          Length = 572

 Score =  143 bits (360), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 42/207 (20%), Positives = 82/207 (39%), Gaps = 11/207 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +  +    SGV  +     ++ + + + +R +++    +E+  P 
Sbjct: 17  DAEVISHQLLLRAGYIRRV---TSGVYDYLPLALRVLRRIEAIIREEMERAGAQELLMPM 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    LW++SG    Y   +   +      +      L P +      + +  L+SY++L
Sbjct: 74  VQPTELWEKSGRLAKYGPELLRFED-----RHAHQSCLGPTHEEVICDLMSRELRSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN-ECLKIHNLIISIYKD 417
           P+ L +  + +R+E      GLMR R F   DA+ F   ++    E   + +    I+  
Sbjct: 129 PLNLYQIQNKFRDEIRPRF-GLMRGREFVMKDAYSFHADDESLMAEYRNMFDTYTRIFDR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDA 444
            G     V+  T       S      A
Sbjct: 188 LGLRFRPVEADTGSIGGSDSHEFHVLA 214



 Score = 88.3 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 64/143 (44%), Gaps = 8/143 (5%)

Query: 509 FYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN----LPLWLSPIQAIVTTI--T 561
             V   +++    +     +G  + R +  ++E    +     P  L+P   I+ ++  +
Sbjct: 422 MEVVFQNQQGKREVATMGCYGIGVSRLMAAVVEQCHDDGGIAWPDVLAPFPVILVSMGKS 481

Query: 562 SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
            + +E + EI   L++  + +  D RNE    K ++  +  IP+ I+ GD+   E     
Sbjct: 482 DAVLEASGEIYKQLQTAGIDVLWDERNERPGVKFKDAELIGIPLQIVIGDRGLKEGVAEF 541

Query: 622 RRFGSTTTQKVSLLDAIPILTKE 644
            R GS   ++V++ D + + T E
Sbjct: 542 GRRGS-DRREVAIADVVAMATTE 563


>gi|229530020|ref|ZP_04419410.1| prolyl-tRNA synthetase [Vibrio cholerae 12129(1)]
 gi|229333794|gb|EEN99280.1| prolyl-tRNA synthetase [Vibrio cholerae 12129(1)]
          Length = 571

 Score =  143 bits (360), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 47/249 (18%), Positives = 95/249 (38%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R+
Sbjct: 3   TSKYLLSTLKETPNDAEVVSHKLMLRAGMIRKLA---SGLYTWLPTGLRVLRKVENIVRQ 59

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           +I      E   P V    LW+++G  +     +        T +  R F L P      
Sbjct: 60  EIDNAGAIETLMPVVQPFQLWEETGRSEKMGPELLRF-----TDRHERPFVLSPTAEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
            A+  + + SY++LP+ L +  + +R+E      G+MR R F   DA+ F   +    + 
Sbjct: 115 TALVRNEVSSYKQLPLNLYQIQTKFRDERRPRF-GVMRAREFCMMDAYSFDIDKAGLEKS 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            + +H      +   G +   V   T      GS      AE+    +  + ++     I
Sbjct: 174 YEAMHVAYCKAFDRMGLDYRPVLADTGAIGGNGSHEFHVLAESGEDLIAFSTESDYAANI 233

Query: 464 NTGVLLGEG 472
                +   
Sbjct: 234 EKAEAVAPA 242



 Score = 86.4 bits (212), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 28/166 (16%), Positives = 63/166 (37%), Gaps = 13/166 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           + R  + G I Q+  N   + N   ++S+ +    V++    +G  + R +   IE    
Sbjct: 405 LKRGIEVGHIFQLGTNYSEKMNCGVLDSNGKN---VILEMGCYGIGVSRVVAAAIEQNHD 461

Query: 545 N----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +     P  ++P Q  +  +    +    + A+++   L +  + +  D R E       
Sbjct: 462 DYGIIWPDAIAPFQVAIVPMNMHKSERVQQAAEKLYAELTAAGIEVLFDDRKERPGVMFS 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +  +  +P  II GD+   E     +       + V++   I  + 
Sbjct: 522 DMELIGVPHTIIIGDRSMDEGHFEYKNRRQGEKEAVAMESIIDFIQ 567


>gi|320529253|ref|ZP_08030345.1| prolyl-tRNA synthetase [Selenomonas artemidis F0399]
 gi|320138883|gb|EFW30773.1| prolyl-tRNA synthetase [Selenomonas artemidis F0399]
          Length = 570

 Score =  143 bits (360), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 49/221 (22%), Positives = 85/221 (38%), Gaps = 11/221 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            T            E+E   HR L R   +    +   G+  +    W+  + +   +R 
Sbjct: 3   ATNLYAPTLRNTPAEAEIASHRLLYRAGLIR---KSAGGMYTYLPLAWRTLRKIEQIIRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +EI  P +    LW++SG W +Y A M  ++      +  R F L P +    
Sbjct: 60  EMDAAGGQEIMMPILQPAELWEESGRWGAYGAEMMRIQD-----RHERAFCLGPTHEEMI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
            A+    L+SY++LPV L +    +R+E      G+MR R F   D + F    E M   
Sbjct: 115 TALVRDELRSYKQLPVMLYQIQDKFRDERRPRF-GVMRSREFIMQDLYSFDKDVEGMHES 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
             K++    +++   G     V+          S+     A
Sbjct: 174 YRKMYEAYTNVFTRCGLNFRAVEADCGAIGGGRSEEFTVLA 214



 Score = 78.3 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 50/151 (33%), Gaps = 8/151 (5%)

Query: 486 AIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
            I R  + G I  +         A +++    K  P+ +     G        + +N   
Sbjct: 402 HISRGIEAGQIFALGTKYSEAMQANFLDVDG-KLKPLQMGCYGIGVGRTMAAAIEQNHDE 460

Query: 545 NLPLWLSPIQAI------VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           +  +W   I         V       + YA+EI   L++  + +  D R E    K  + 
Sbjct: 461 HGIIWPRAIAPYEVVVVAVNAKVEEQLAYAEEIYEELRAAGIDVLLDDRRERAGVKFNDC 520

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
            +   P+ I  G K     SI ++   +   
Sbjct: 521 DLIGYPVRIAIGPKTIENGSIEVKLRRTGEL 551


>gi|153824641|ref|ZP_01977308.1| prolyl-tRNA synthetase [Vibrio cholerae MZO-2]
 gi|149741859|gb|EDM55888.1| prolyl-tRNA synthetase [Vibrio cholerae MZO-2]
          Length = 571

 Score =  143 bits (360), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 47/249 (18%), Positives = 94/249 (37%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +   L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R+
Sbjct: 3   TSNYLLSTLKETPNDAEVVSHKLMLRAGMIRKLA---SGLYTWLPTGLRVLRKVENIVRQ 59

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           +I      E   P V    LW+++G  +     +        T +  R F L P      
Sbjct: 60  EIDNAGAIETLMPVVQPFELWEETGRSEKMGPELLRF-----TDRHERPFVLSPTAEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
            A+  + + SY++LP+ L +  + +R+E      G+MR R F   DA+ F   +    + 
Sbjct: 115 TALVRNEVSSYKQLPLNLYQIQTKFRDERRPRF-GVMRAREFCMMDAYSFDIDKAGLEKS 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            + +H      +   G +   V   T      GS      AE+    +  + ++     I
Sbjct: 174 YEAMHVAYCKAFDRMGLDYRPVLADTGAIGGNGSHEFHVLAESGEDLIAFSTESDYAANI 233

Query: 464 NTGVLLGEG 472
                +   
Sbjct: 234 EKAEAVAPA 242



 Score = 85.6 bits (210), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 64/165 (38%), Gaps = 13/165 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           + R  + G I Q+  N   + N   ++S+ +    V++    +G  + R +   IE    
Sbjct: 405 LKRGIEVGHIFQLGTNYSEKMNCGVLDSNGKN---VILEMGCYGIGVSRVVAAAIEQNHD 461

Query: 545 N----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +     P  ++P Q  +  +    +    + A+++   L +  + +  D R E       
Sbjct: 462 DYGIIWPDAIAPFQVAIVPMNMHKSERVQQAAEQLYAELTAAGIEVLFDDRKERPGVMFS 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           +  +  +P  II GD+   E     +   S   + V++   I  +
Sbjct: 522 DMELIGVPHTIIIGDRSMDEGHFEYKNRRSGEKEAVAMASIIDFI 566


>gi|262376731|ref|ZP_06069959.1| prolyl-tRNA synthetase [Acinetobacter lwoffii SH145]
 gi|262308441|gb|EEY89576.1| prolyl-tRNA synthetase [Acinetobacter lwoffii SH145]
          Length = 572

 Score =  143 bits (360), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 47/252 (18%), Positives = 94/252 (37%), Gaps = 13/252 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++           ++E   H+ + R   +  +A   SG+  W   G ++   + + +R 
Sbjct: 3   ASRFLFATLRETPNDAEVISHQLMLRAGMIRKLA---SGLYTWLPMGVRVLNKVEAIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      ++  P      LW++SG +  Y   +          +    F L P +    
Sbjct: 60  EMDKVGSLQVYMPVTQPASLWEESGRYVQYGPELLRFND-----RHGNPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + LKSY++LP    +  + +R+E      G+MR R F   DA+ F   ++   + 
Sbjct: 115 TDLARNELKSYKQLPANFYQVQTKFRDEIRPRF-GVMRSREFIMKDAYSFHANQESLQQT 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   G     V+  T      GS      A +    +  + ++     I
Sbjct: 174 YDDMYAAYCKIFTRLGLNFRPVQADTGSIGGSGSHEFHVLASSGEDDIAFSTESDYAANI 233

Query: 464 N--TGVLLGEGA 473
                VL+GE A
Sbjct: 234 EMAEAVLVGERA 245



 Score = 92.5 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 58/167 (34%), Gaps = 13/167 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           I R  + G I Q+            +    +   P  +    +G  + R +   IE    
Sbjct: 409 IKRGIEVGHIFQLGQKYSEALGCKVLGEDGK---PFTVTMGCYGIGVTRVVASAIEQNFD 465

Query: 545 N----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                 P  ++P +  +  +    +   +E A+ +   L++    +  D RNE    K  
Sbjct: 466 EKGIIWPTAIAPFEVAIVPMNAHKSPRTMEAAEALYAELQAAGFDVLLDDRNERPGVKFS 525

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  +  IP  I+ G+K     +   +      +  +S  + +  + K
Sbjct: 526 DLELTGIPHRIVIGEKGLDAGTFEYKGRRDAESVNISKEELLAKIAK 572


>gi|256827500|ref|YP_003151459.1| prolyl-tRNA synthetase, family II [Cryptobacterium curtum DSM
           15641]
 gi|256583643|gb|ACU94777.1| prolyl-tRNA synthetase, family II [Cryptobacterium curtum DSM
           15641]
          Length = 588

 Score =  143 bits (360), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 42/180 (23%), Positives = 76/180 (42%), Gaps = 11/180 (6%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
            H+ L R   +    +  +G   +   GW++ + +   +R ++     +EI  P +    
Sbjct: 26  SHQLLLRAGMMR---KSATGAYTYLPLGWRVIRKIERIVREEMDAIGSQEIMMPVIQPAE 82

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW +SG W+ Y   +  +       +      L P +     A+  + L+SY++LPV L 
Sbjct: 83  LWHESGRWNDYGPELMRMDD-----RHGHGLCLGPTHEELITALVRNELRSYKQLPVILY 137

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKDFGFEK 422
           +  S +R+E      GLMR R F   DA+ F  +KE +     ++      I +  G   
Sbjct: 138 QIQSKFRDEIRPRF-GLMRSREFIMKDAYSFHASKESLQKTYDEMSAAYARICERVGLVY 196



 Score = 84.1 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 59/171 (34%), Gaps = 8/171 (4%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN---FKG 544
           R  + G + Q+         A ++     +  P ++     G       ++ ++   +  
Sbjct: 403 RGIEVGQVFQLGDKYSRAMGATFMAEDGSEQ-PFLMGCYGVGVSRTMAAVVEQHNDEYGI 461

Query: 545 NLPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             PL ++P Q  +  +          A+ +A+ L    L +  D R E    K  E  + 
Sbjct: 462 KWPLSVAPAQVCILPLAVGDEEVEPAAEALAHELAGMGLEVVIDDRKERPGVKFAEADLL 521

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
             P+ II G +        ++   +   + +++ +    L      PD  +
Sbjct: 522 GWPLQIIIGKRGLDAGEYELKNRSTGAKRTIAIDEFNAALAMVKSMPDVAR 572


>gi|27365189|ref|NP_760717.1| prolyl-tRNA synthetase [Vibrio vulnificus CMCP6]
 gi|81844691|sp|Q8DBH9|SYP_VIBVU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|27361336|gb|AAO10244.1| prolyl-tRNA synthetase [Vibrio vulnificus CMCP6]
          Length = 571

 Score =  143 bits (360), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 47/249 (18%), Positives = 97/249 (38%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R+
Sbjct: 3   TSKYLLSTLKETPNDAEVVSHQLMLRAGMIRKLA---SGLYTWLPTGLRVLRKVENIVRQ 59

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           +I      E   P V    LW+++G  +     +        T + +R F L P      
Sbjct: 60  EIDNAGAIETLMPVVQPFELWEETGRSEKMGPELLRF-----TDRHVRPFVLSPTAEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
            A+  + + SY++LP+ L +  + +R+E      G+MR R F   DA+ F   +    + 
Sbjct: 115 TALVRNEVSSYKQLPINLYQIQTKFRDERRPRF-GVMRAREFCMMDAYSFDIDKAGLEKS 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            + +H+     +   G E   V   +      GS      AE+    +  + ++     I
Sbjct: 174 YQAMHDAYCKAFDRMGLEYRPVLADSGAIGGNGSQEFHVLAESGEDLIAFSTESDYAANI 233

Query: 464 NTGVLLGEG 472
                +   
Sbjct: 234 EKAEAVAPA 242



 Score = 85.2 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 62/168 (36%), Gaps = 13/168 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           + R  + G I Q+        N   ++S+ +    V++    +G  + R +   IE    
Sbjct: 405 LKRGIEVGHIFQLGNVYSEAMNCGVLDSNGKN---VILEMGCYGIGVSRVVAAAIEQNND 461

Query: 545 N----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                 P  L+P Q  +  +    +    E A+++   L +  + +  D R E       
Sbjct: 462 KYGIIWPDALAPFQVAIVPMNMHKSERVQEAAEKLYAELTAMGIEVLFDDRKERPGVMFS 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  +  IP  I+ GD+   E     +   S     V++ D +  +  +
Sbjct: 522 DMELIGIPHTIVIGDRSMDEGHFEYKNRRSGEKTPVAMADIVEHIKAQ 569


>gi|37680756|ref|NP_935365.1| prolyl-tRNA synthetase [Vibrio vulnificus YJ016]
 gi|81859846|sp|Q7MIE5|SYP_VIBVY RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|37199505|dbj|BAC95336.1| prolyl-tRNA synthetase [Vibrio vulnificus YJ016]
          Length = 571

 Score =  143 bits (360), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 47/249 (18%), Positives = 97/249 (38%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R+
Sbjct: 3   TSKYLLSTLKETPNDAEVVSHQLMLRAGMIRKLA---SGLYTWLPTGLRVLRKVENIVRQ 59

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           +I      E   P V    LW+++G  +     +        T + +R F L P      
Sbjct: 60  EIDNAGAIETLMPVVQPFELWEETGRSEKMGPELLRF-----TDRHVRPFVLSPTAEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
            A+  + + SY++LP+ L +  + +R+E      G+MR R F   DA+ F   +    + 
Sbjct: 115 TALVRNEVSSYKQLPINLYQIQTKFRDERRPRF-GVMRAREFCMMDAYSFDIDKAGLEKS 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            + +H+     +   G E   V   +      GS      AE+    +  + ++     I
Sbjct: 174 YQAMHDAYCKAFDRMGLEYRPVLADSGAIGGNGSQEFHVLAESGEDLIAFSTESDYAANI 233

Query: 464 NTGVLLGEG 472
                +   
Sbjct: 234 EKAEAVAPA 242



 Score = 85.2 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 62/168 (36%), Gaps = 13/168 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           + R  + G I Q+        N   ++S+ +    V++    +G  + R +   IE    
Sbjct: 405 LKRGIEVGHIFQLGNVYSEAMNCGVLDSNGKN---VILEMGCYGIGVSRVVAAAIEQNND 461

Query: 545 N----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                 P  L+P Q  +  +    +    E A+++   L +  + +  D R E       
Sbjct: 462 KYGIIWPDALAPFQVAIVPMNMHKSERVQEAAEKLYAELTAMGIEVLFDDRKERPGVMFS 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  +  IP  I+ GD+   E     +   S     V++ D +  +  +
Sbjct: 522 DMELIGIPHTIVIGDRSMDEGHFEYKNRRSGEKTPVAMADIVEYIKAQ 569


>gi|302384826|ref|YP_003820648.1| prolyl-tRNA synthetase [Clostridium saccharolyticum WM1]
 gi|302195454|gb|ADL03025.1| prolyl-tRNA synthetase [Clostridium saccharolyticum WM1]
          Length = 477

 Score =  143 bits (360), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 65/417 (15%), Positives = 147/417 (35%), Gaps = 58/417 (13%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
           ++    + +  + ++ +L   +     +      G+ I++ + S + R+ K+   E +  
Sbjct: 14  MDVDFAQWYTDVVKKAELIDYSSVKGCMAI-KPAGYAIWENIQSELDRRFKEVGVENVYM 72

Query: 297 PQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P  + + L  ++  H + +   +  V          R   ++P +       ++  ++SY
Sbjct: 73  PMFIPESLLQKEKDHVEGFAPEVAWVTHGGLEPLQER-LCVRPTSETLFCDFYSREIQSY 131

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA-HVFCTKEQMFNECLKIHNLIISI 414
           R+LP    ++ SV R E   +    +R R F   +      T E+      ++ +L    
Sbjct: 132 RDLPKLYNQWCSVVRWEK--TTRPFLRSREFLWQEGHTAHATAEEAEARTEQMLHLYADF 189

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            ++     ++    T  EK  G++A +                                 
Sbjct: 190 CEEVLAMPVVRGQKTDKEKFAGAEATY--------------------------------- 216

Query: 475 YGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
                E ++ D  G+  Q GT           F   Y +  ++  +   +H+  +G   R
Sbjct: 217 ---TIEALMHD--GKALQSGTSHNFGSGFAKAFEIQYSDKENKLQY---VHQTSWGMTTR 268

Query: 534 FIGIMIENFKGNLPLWLSPIQAIV-------TTITSSAVEYAQEIANLLKSHHLSIETDF 586
            IG +I     +  L L P  A                +E A E+  +L +    ++ D 
Sbjct: 269 LIGAIIMVHGDDNGLVLPPRIAPTQVIVVPVQQQKEGVLEKAFELKQVLSN--YKVKVDD 326

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +++  +K  E  ++ IP+ +  G ++  E    + R  +     VS+      + +
Sbjct: 327 SDKSPGWKFSESEMRGIPVRVEIGPRDILENQAVLVRRDTHEKITVSIDQLNAKVGE 383


>gi|239907072|ref|YP_002953813.1| prolyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
 gi|259511592|sp|C4XTD0|SYP_DESMR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|239796938|dbj|BAH75927.1| prolyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
          Length = 575

 Score =  143 bits (360), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 49/220 (22%), Positives = 82/220 (37%), Gaps = 11/220 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++           E+E   H+ L R   +  +    +G+  +   G K    +   +R +
Sbjct: 4   SRYYAPTLKETPAEAEVISHKLLLRAGMIRKL---TAGIYTYLPLGLKALNNVAKIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      EI  P V    LW++SG WD Y   +       D     R   L P +     
Sbjct: 61  MDRAGALEILMPAVQPADLWKESGRWDFYGRELLRFVDRHD-----RESCLGPTHEEVVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +  H ++SYR+LPV L +  + +R+E      GLMR R F   DA+ F   +   +   
Sbjct: 116 DLVRHEIRSYRQLPVNLYQIQTKFRDEIRPRF-GLMRGREFVMKDAYSFDKDDSGADASY 174

Query: 406 -KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
             ++     I+K  G +   V   +       S      A
Sbjct: 175 WGMYEAYARIFKRLGLKFRAVAADSGAIGGSFSHEFMVLA 214



 Score = 75.2 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 60/174 (34%), Gaps = 14/174 (8%)

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           G   ++     +G  ++ G            NA +++   ++   +M    +   + R +
Sbjct: 396 GALLDFTKGIEVGHVFKLG-----LKYSKALNATFLDEAGKEQFMIMGCYGI--GVSRIV 448

Query: 536 GIMIENFKGN----LPLWLSPIQAIVTTITSS---AVEYAQEIANLLKSHHLSIETDFRN 588
              IE    +     P  ++P +A +  ++     A   A EI   L +  +    D R+
Sbjct: 449 ASAIEQNHDDGGIVFPPTIAPFEAALINLSPKDETACAKADEIYAALTAAGIETLLDDRD 508

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           E    K ++  +   PI +  G K  +   +  +   +    ++ L        
Sbjct: 509 ERPGVKFKDADLMGHPIQLTLGGKGLARGIVETKDRRTGEKGELPLEGFFEAFA 562


>gi|218885229|ref|YP_002434550.1| prolyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|226699140|sp|B8DNM5|SYP_DESVM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|218756183|gb|ACL07082.1| prolyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 575

 Score =  143 bits (360), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 45/221 (20%), Positives = 88/221 (39%), Gaps = 11/221 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +   +        ++E   H+ L R   +  +    SG+  +   G K  +   + +R 
Sbjct: 3   WSNCYIPTLKEAPADAEVVSHKLLTRAGMIRKL---TSGIYIYMPLGLKAIEKTAAIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E++ P V    LWQ+SG W+ Y   +   +      ++ R + L P +    
Sbjct: 60  EMNRAGALELSMPMVQPADLWQESGRWEFYGKELLRFQD-----RNGRDYCLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    ++SYR+LP+ L +  + +R+E      GLMR R F   DA+ F   E   ++ 
Sbjct: 115 TDLVRGEVRSYRQLPINLYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSFDRDEAGADKS 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
              ++    +++K  G     V+  +       S      A
Sbjct: 174 YWAMYEAYQNVFKRLGLRFRAVEADSGSIGGSFSHEFMVLA 214



 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 21/163 (12%), Positives = 59/163 (36%), Gaps = 12/163 (7%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN- 545
           R  + G +  +           +++   ++    ++    +G  + R +   IE      
Sbjct: 404 RGIEVGHVFKLGTKYSEPLKCTFLDEDGKEK---VMVMGCYGIGVSRVVASCIEQNHDAD 460

Query: 546 ---LPLWLSPIQAIVTTITSSAVE---YAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
               P  ++P +A++  +     E    A+E    LK+  + +  D R+E    K ++  
Sbjct: 461 GIVFPPPIAPFEAVLCCLDPKNGETLGKAEEFYAELKAQGVDVILDDRDERPGVKFKDAD 520

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +  +P+ ++ G K  +   +  +   +    ++ +        
Sbjct: 521 LVGMPLQLVVGGKGLARGIVEAKDRRTGEKTELPVEGFAEAFR 563


>gi|78212243|ref|YP_381022.1| prolyl-tRNA synthetase [Synechococcus sp. CC9605]
 gi|114152271|sp|Q3ALR5|SYP_SYNSC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|78196702|gb|ABB34467.1| prolyl-tRNA synthetase [Synechococcus sp. CC9605]
          Length = 593

 Score =  143 bits (360), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 63/290 (21%), Positives = 110/290 (37%), Gaps = 11/290 (3%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E   H+ L R   +  +   GSG+  +    W++ Q + + +R ++     +E   PQ
Sbjct: 17  EAEITSHQLLLRAGYIRRV---GSGIYAYLPLMWRVLQKITAVVREEMNRAGAQETLLPQ 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W  Y A    +   +D  +  R   L P +     ++    L+SYR+L
Sbjct: 74  LHPAELWQKSGRWQGYTAGEGIMFHLED--RQGRELGLGPTHEEVITSLAGELLRSYRQL 131

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKD 417
           PV L +  + +R+E      GLMR R F   DA+ F   E    E    +      I++ 
Sbjct: 132 PVNLYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSFHASEADLRETYGAMDQAYRRIFER 190

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA---F 474
            G + + V   +       S      A+     +L +        +   V +   A    
Sbjct: 191 CGLDAVPVDADSGAIGGAASQEFMVTADAGEDLILISDDGQYAANLEKAVSIPSAASPLP 250

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIH 524
            GP+           +  C T   D +   +   F      E   P+++ 
Sbjct: 251 DGPEESIPTPGLGSIESLCDTKCWDPSQVVKVLLFVATLDDETLQPLLVS 300



 Score = 84.4 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 32/167 (19%), Positives = 64/167 (38%), Gaps = 9/167 (5%)

Query: 488 GRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNL 546
            R  + G I Q+         + + N +  K  P  +     G        + ++   + 
Sbjct: 429 KRGIEVGHIFQLGRKYSEAMESGFTNENG-KTEPFWMGCYGIGVSRLAQAAVEQHHDDSG 487

Query: 547 PLWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
             W    +P +AIV        +  +  + +   L++  + +  D R E    K ++  +
Sbjct: 488 ICWPTAIAPFEAIVVVANIQDDTQGQLGEALYAELQAADVDVLLDDRKERAGVKFKDADL 547

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLP 647
             IP  I+ G ++ASE  + + R  S   +K+   +A+  L K   P
Sbjct: 548 IGIPWRIVVG-RDASEGIVELVRRSSREVRKLPHAEAVSCLIKALHP 593


>gi|86608604|ref|YP_477366.1| prolyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|114152268|sp|Q2JMD8|SYP_SYNJB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|86557146|gb|ABD02103.1| prolyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 609

 Score =  143 bits (360), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 55/268 (20%), Positives = 101/268 (37%), Gaps = 10/268 (3%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q           E+E   H+ L R   +  ++    G+  +    W++ Q +   +R++
Sbjct: 8   SQMLFVTLREDPVEAELPSHKLLLRGCFIRRLS---PGIYTYLPLLWRVLQKISEIVRQE 64

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E   PQ+    +W++SG WD Y      +    D  +  R  +L P +     
Sbjct: 65  MNAIGGQECLLPQLQPAEIWRESGRWDVYTQAEGIMFALKD--RQGREQSLGPTHEEVIT 122

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    ++SYR+LP  L +  + +R+E      GLMR R F   DA+ F   E+   +  
Sbjct: 123 LLARDLIRSYRQLPQTLYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSFHANEESLRQTY 181

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPE--KRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
           + ++     I +  G E  +V             S      A      +L T   S    
Sbjct: 182 QDMYRAYSRILRRCGLEFRVVDADAGAIGGPSAASQEFMVLASAGEDEILYTPDGSYAAN 241

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRD 490
           +   V +   A   P   + + D  G +
Sbjct: 242 VEKAVSIPPPAAESPYTAFQVLDTPGTE 269



 Score = 73.7 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 23/162 (14%), Positives = 56/162 (34%), Gaps = 9/162 (5%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I Q+         A + +    +  P+ +     G        + ++   N  
Sbjct: 440 RGIEIGHIFQLGLKFSLPMRATFTDEQGSEQ-PLWMGCYGIGVSRLAQAAVEQSHDANGI 498

Query: 548 LWL---SPIQAIVTT---ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W    +P   +V          +  A+++   L +  +    D R+E    K ++  + 
Sbjct: 499 IWPVAIAPYHVVVVVPNISDPEQMSVAEKLVQDLATAGIETLWDDRDERAGVKFKDADLI 558

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            IP  I  G +   +  + +    S    ++ + + +  L +
Sbjct: 559 GIPYRITTG-RSLKQGKVELTERASGQATEIPIEEVVTTLKE 599


>gi|187925415|ref|YP_001897057.1| prolyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
 gi|226699128|sp|B2SYU8|SYP_BURPP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|187716609|gb|ACD17833.1| prolyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
          Length = 578

 Score =  143 bits (360), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 54/287 (18%), Positives = 106/287 (36%), Gaps = 13/287 (4%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ + R   +  +A    G+  +   G +  + + + +R ++      E+  P 
Sbjct: 17  DAEIVSHKLMVRAGMIRRVA---GGIYNYLPVGLRSIRKVEAIVREEMNRAGGIELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    LWQ+SG W+ Y   +   K      +    F + P +      +  + +KSYR+L
Sbjct: 74  VQPAELWQESGRWEKYGPELLRFKD-----RRQSDFVIGPTHEEVVTDIARNQIKSYRQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKD 417
           PV   +  + +R+E      G+MR R F   DA+ F    + +     K+++  + I+  
Sbjct: 129 PVNFYQIQTKFRDEIRPRF-GVMRGREFIMKDAYSFDKDMDGLRESYRKMYDAYVRIFTR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
            G +   V          GS      AE     +     +     +     L   A    
Sbjct: 188 LGLDFRAVAADNGSIGGSGSHEFHVIAETGEDAIAYCPTSDFAANVEAAEALPLYAERAA 247

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLP--SRFNAFYVNSHSEKCHPVM 522
             E + K       +C  +    N+P      +  + + +E   P +
Sbjct: 248 PTEEMKKTPTPGKAKCEAVAELLNIPLERTIKSIILATENEGAEPTI 294



 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 25/158 (15%), Positives = 56/158 (35%), Gaps = 11/158 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNL 546
           R  + G + Q+         A  ++   +   P+ +     G   R +G  IE NF    
Sbjct: 409 RGIEVGHVFQLGTKYSEAMGATCLDETGKP-RPMEMGCYGIGVT-RILGAAIEQNFDDKG 466

Query: 547 PLWL---SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
            +W    +P + ++  +    + +    A ++   L    + +  D R E       +  
Sbjct: 467 IIWPESIAPFEVVLCPMGYDRSEAVRAEADKLYAALVEAGIDVILDDRGERPGVMFADWE 526

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
           +  +P  ++ GD+   E  +  +         + + DA
Sbjct: 527 LIGVPHRLVIGDRGLKEGKLEYQGRRDAEATLLPVEDA 564


>gi|109897601|ref|YP_660856.1| prolyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
 gi|123171506|sp|Q15WD6|SYP_PSEA6 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|109699882|gb|ABG39802.1| prolyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
          Length = 571

 Score =  143 bits (360), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 51/248 (20%), Positives = 95/248 (38%), Gaps = 11/248 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++   +   +R 
Sbjct: 3   TSQYLLSTQKETPADAEVISHQLMLRAGLVRKLA---SGLYTWLPTGLRVLNKVAQIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      EI  P V    LWQ+SG WD Y   +  +K      +  R F L P +    
Sbjct: 60  EMDRAGSLEILMPVVQPADLWQESGRWDEYGPELLRIKD-----RHYRDFVLGPTHEEVV 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNE 403
            A+  + + SY++LP+ + +  + +R+E      G+MR R FT  DA+ F  + E +   
Sbjct: 115 TALVKNEVSSYKQLPLNVYQVQTKFRDEVRPRF-GVMRGREFTMKDAYSFHLSDECLNKT 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +      +++    E   V           S      A++    +  +  +     I
Sbjct: 174 YDDMFAAYCRVFERINLEFRPVIADNGSIGGNASHEFHVLADSGEDDIAFSNASDYAANI 233

Query: 464 NTGVLLGE 471
                L  
Sbjct: 234 EKAEALAP 241



 Score = 81.8 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 27/178 (15%), Positives = 65/178 (36%), Gaps = 16/178 (8%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
           P  +      I R  + G I Q+        N   ++ + +     +++   +G  + R 
Sbjct: 397 PSPDGQGTLEIKRGIEVGHIFQLGSKYSEALNCGVLDENGKHQ---VLNMGCYGIGVSRI 453

Query: 535 IGIMIENFKGN----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDF 586
           +   IE          P  ++P +  +  +    +    + A+++   LK+  + +  D 
Sbjct: 454 VAAAIEQNHDKYGIIWPDAIAPFKVAIVPMNMHKSHRIQQVAEDLYAQLKAAGVEVLFDD 513

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS---LLDAIPIL 641
           R E       +  +  +P  I+ G++   E+ +  +   S   Q +    L + +  L
Sbjct: 514 RKERPGVMFNDMELVGVPHTIVIGERNLDEQKVEYKNRRSGEKQLIDIPQLAEFVSTL 571


>gi|125975428|ref|YP_001039338.1| prolyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|152016597|sp|A3DJL6|SYP_CLOTH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|125715653|gb|ABN54145.1| prolyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
          Length = 572

 Score =  143 bits (360), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 49/216 (22%), Positives = 89/216 (41%), Gaps = 11/216 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +            E+E   H+ + R   +  +A   SG+  +   G+++F+ +   +R +
Sbjct: 4   SNMFFQTLREVPAEAEIASHQLMLRAGLMRKLA---SGIYSFLPLGYRVFRKIEQIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E+    +L    +Q SG W+ + A MF +K      ++ R F L P +     
Sbjct: 61  MDRAGAQELIMSALLPAESYQASGRWEVFGAEMFRLKD-----RNGRDFCLGPTHEEIFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
                  +SYR LP+ L +  + YR+E      G+MR R F   DA+ F   E   +   
Sbjct: 116 ETVKSVTRSYRSLPLILYQIQTKYRDERRPRF-GVMRSREFVMKDAYSFDRDEAGLDISY 174

Query: 406 -KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            K+++    I+   G + I+V   T       S   
Sbjct: 175 KKMYDAYCRIFDRLGLDYIIVDADTGAMGGSDSQEF 210



 Score = 91.0 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 65/175 (37%), Gaps = 9/175 (5%)

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
            PK    +K   G +      ++        +  Y++    K  P+++     G      
Sbjct: 394 CPKCGAPVKVEFGIEV-GHIFKLGTKYSEALDCIYLDETG-KERPMIMGCYGIGINRSMA 451

Query: 536 GIMIENFKGNLPLWL---SPIQAIVTTITSS---AVEYAQEIANLLKSHHLSIETDFRNE 589
            ++ +N   N  +W    +P   IV  + ++    +E A++I   L    + +  D R+E
Sbjct: 452 AVIEQNNDENGIIWPISIAPYHVIVIPVNTTDSVQMELAEKIYTQLGEMGIEVLLDDRDE 511

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
               K ++  +  IPI I  G + A E  +  +         +   +AI    KE
Sbjct: 512 RPGVKFKDADLIGIPIRITVGKR-AGEGIVEYKLRREKDFAAIPYEEAIAKAKKE 565


>gi|307331523|ref|ZP_07610636.1| prolyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113]
 gi|306882840|gb|EFN13913.1| prolyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113]
          Length = 573

 Score =  143 bits (360), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 61/322 (18%), Positives = 118/322 (36%), Gaps = 21/322 (6%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
            L        ++E   H+ L R   +       +G+  W   G K+ + +   +R ++  
Sbjct: 14  MLKTLREDPADAETASHKLLVRAGYVR---RAAAGIWTWLPIGKKVLENVARIVREEMDA 70

Query: 290 -DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
              +E+  P +L +  ++ SG WD Y   +F +K      +    + L P +        
Sbjct: 71  IGAQEVLLPALLPREPYEVSGRWDEYGDLLFRIKD-----RKGADYLLGPTHEEIFTLTV 125

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
                SY++LPV L +  + YR+E      G++R R F   D++ F T ++   E  ++H
Sbjct: 126 KDQCTSYKDLPVMLYQIQTKYRDEARPR-SGVLRGREFLMKDSYSFDTTDEGLAESYRLH 184

Query: 409 N-LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA---ENIMKGVLDTIKNSSQDRIN 464
                 I++  G +  +V   +       S+     A   E+      +    ++ + + 
Sbjct: 185 REAYQRIFQRLGLDYRIVSAVSGAMGGSASEEFLAPAAAGEDTFVDCPNCDYAANTEAVT 244

Query: 465 TGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIH 524
             V   EGA +GP  E    D      +     +     +      V    E     +  
Sbjct: 245 VAVSPVEGAEHGPLEELDTPDT--PTIETLADYLGVPASATLKNLLVKIDGE-----ITA 297

Query: 525 RAVFGSIERFIGIMIENFKGNL 546
             V G  E  +G + E+    +
Sbjct: 298 VGVPGDREVDLGKLGEHLAPAV 319



 Score = 89.8 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 27/168 (16%), Positives = 62/168 (36%), Gaps = 10/168 (5%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           + R  + G I Q+       F    +  + +     M    V   + R +  + E     
Sbjct: 409 LDRAIEIGHIFQLGRKYADAFQLDVLGQNGKPARVTMGSYGV--GVSRAVAALAEQTHDE 466

Query: 546 ----LPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHS 599
                P  ++P    +     +   E A +IA  L +  + +  D R   +   K  +  
Sbjct: 467 SGLCWPREVAPADVHIVAAGKALQTELALDIAEKLGTAGVRVMVDDRAGVSPGVKFTDAE 526

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLP 647
           +  +P I++ G + A +  + ++   +   +++ + +AI  LT  +  
Sbjct: 527 LIGVPTILVVG-RGAKDGVVELKDRRTGEREELPIDEAISRLTATATA 573


>gi|294140027|ref|YP_003556005.1| prolyl-tRNA synthetase [Shewanella violacea DSS12]
 gi|293326496|dbj|BAJ01227.1| prolyl-tRNA synthetase [Shewanella violacea DSS12]
          Length = 569

 Score =  143 bits (360), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 45/245 (18%), Positives = 92/245 (37%), Gaps = 11/245 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  L+       ++E   H+ + R   +     + SG+  W   G ++ + + + +R +
Sbjct: 4   SKYLLSTQKETPADAEVVSHQLMLRAGMVR---RNASGLYSWLPTGLRVLRKVEAIVREE 60

Query: 287 IK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      EI  P V    LW ++G W+ +   +   +      +  R F L P +     
Sbjct: 61  MNKAGAVEILMPMVQPADLWIETGRWEKFGPELLRFQD-----RHNRDFVLGPTHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +    + SY++LP+ L +  + +R+E      G+MR R F   DA+ F    E M    
Sbjct: 116 DIIRKEINSYKQLPLTLYQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHLDQESMDVTY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
             +     +I++  G     V   T       S      A++    +  + ++     I 
Sbjct: 175 DAMFQAYNNIFERMGLSFRPVLADTGSIGGSMSHEFHVLADSGEDLIAYSTESDYAANIE 234

Query: 465 TGVLL 469
                
Sbjct: 235 KAEAP 239



 Score = 79.4 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 21/165 (12%), Positives = 57/165 (34%), Gaps = 9/165 (5%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           A+ R  + G I Q+  N     +A  ++ + +    +++     G        + +N   
Sbjct: 403 ALLRGIEVGHIFQLGTNYSESMHANVLDQNGKSKT-LLMGCYGVGVSRIVAAAIEQNHDD 461

Query: 545 NLPLWL---SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
              +W    +P    +  +    +    + A+++   L    + +  D R E       +
Sbjct: 462 RGIIWPKAIAPFTVGILPMNMHKSHRVKDIAEKLYQDLNDAGIEVLFDDRKERPGVMFAD 521

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             +  +P +++ GD+         +   +   Q++     +  L 
Sbjct: 522 MELVGLPHVVVIGDRNIDNGVFEYKNRRTGEKQEIPFDQLLDFLK 566


>gi|15640891|ref|NP_230522.1| prolyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121585725|ref|ZP_01675520.1| prolyl-tRNA synthetase [Vibrio cholerae 2740-80]
 gi|121728341|ref|ZP_01681371.1| prolyl-tRNA synthetase [Vibrio cholerae V52]
 gi|147673158|ref|YP_001216355.1| prolyl-tRNA synthetase [Vibrio cholerae O395]
 gi|153819016|ref|ZP_01971683.1| prolyl-tRNA synthetase [Vibrio cholerae NCTC 8457]
 gi|153823083|ref|ZP_01975750.1| prolyl-tRNA synthetase [Vibrio cholerae B33]
 gi|227081051|ref|YP_002809602.1| prolyl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|229505518|ref|ZP_04395028.1| prolyl-tRNA synthetase [Vibrio cholerae BX 330286]
 gi|229510812|ref|ZP_04400291.1| prolyl-tRNA synthetase [Vibrio cholerae B33]
 gi|229517932|ref|ZP_04407376.1| prolyl-tRNA synthetase [Vibrio cholerae RC9]
 gi|229608537|ref|YP_002879185.1| prolyl-tRNA synthetase [Vibrio cholerae MJ-1236]
 gi|254848011|ref|ZP_05237361.1| prolyl-tRNA synthetase [Vibrio cholerae MO10]
 gi|255744669|ref|ZP_05418620.1| prolyl-tRNA synthetase [Vibrio cholera CIRS 101]
 gi|262161198|ref|ZP_06030309.1| prolyl-tRNA synthetase [Vibrio cholerae INDRE 91/1]
 gi|262168701|ref|ZP_06036396.1| prolyl-tRNA synthetase [Vibrio cholerae RC27]
 gi|81858145|sp|Q9KTM7|SYP_VIBCH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|172047427|sp|A5F340|SYP_VIBC3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|254782925|sp|C3LTC5|SYP_VIBCM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|9655329|gb|AAF94037.1| prolyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121550088|gb|EAX60104.1| prolyl-tRNA synthetase [Vibrio cholerae 2740-80]
 gi|121629396|gb|EAX61826.1| prolyl-tRNA synthetase [Vibrio cholerae V52]
 gi|126510449|gb|EAZ73043.1| prolyl-tRNA synthetase [Vibrio cholerae NCTC 8457]
 gi|126519409|gb|EAZ76632.1| prolyl-tRNA synthetase [Vibrio cholerae B33]
 gi|146315041|gb|ABQ19580.1| prolyl-tRNA synthetase [Vibrio cholerae O395]
 gi|227008939|gb|ACP05151.1| prolyl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|227012695|gb|ACP08905.1| prolyl-tRNA synthetase [Vibrio cholerae O395]
 gi|229344647|gb|EEO09621.1| prolyl-tRNA synthetase [Vibrio cholerae RC9]
 gi|229350777|gb|EEO15718.1| prolyl-tRNA synthetase [Vibrio cholerae B33]
 gi|229357741|gb|EEO22658.1| prolyl-tRNA synthetase [Vibrio cholerae BX 330286]
 gi|229371192|gb|ACQ61615.1| prolyl-tRNA synthetase [Vibrio cholerae MJ-1236]
 gi|254843716|gb|EET22130.1| prolyl-tRNA synthetase [Vibrio cholerae MO10]
 gi|255737700|gb|EET93094.1| prolyl-tRNA synthetase [Vibrio cholera CIRS 101]
 gi|262022819|gb|EEY41525.1| prolyl-tRNA synthetase [Vibrio cholerae RC27]
 gi|262028948|gb|EEY47601.1| prolyl-tRNA synthetase [Vibrio cholerae INDRE 91/1]
          Length = 571

 Score =  143 bits (360), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 47/249 (18%), Positives = 94/249 (37%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +   L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R+
Sbjct: 3   TSNYLLSTLKETPNDAEVVSHKLMLRAGMIRKLA---SGLYTWLPTGLRVLRKVENIVRQ 59

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           +I      E   P V    LW+++G  +     +        T +  R F L P      
Sbjct: 60  EIDNAGAIETLMPVVQPFELWEETGRSEKMGPELLRF-----TDRHERPFVLSPTAEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
            A+  + + SY++LP+ L +  + +R+E      G+MR R F   DA+ F   +    + 
Sbjct: 115 TALVRNEVSSYKQLPLNLYQIQTKFRDERRPRF-GVMRAREFCMMDAYSFDIDKAGLEKS 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            + +H      +   G +   V   T      GS      AE+    +  + ++     I
Sbjct: 174 YEAMHVAYCKAFDRMGLDYRPVLADTGAIGGNGSHEFHVLAESGEDLIAFSTESDYAANI 233

Query: 464 NTGVLLGEG 472
                +   
Sbjct: 234 EKAEAVAPA 242



 Score = 86.4 bits (212), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 28/166 (16%), Positives = 63/166 (37%), Gaps = 13/166 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           + R  + G I Q+  N   + N   ++S+ +    V++    +G  + R +   IE    
Sbjct: 405 LKRGIEVGHIFQLGTNYSEKMNCGVLDSNGKN---VILEMGCYGIGVSRVVAAAIEQNHD 461

Query: 545 N----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +     P  ++P Q  +  +    +    + A+++   L +  + +  D R E       
Sbjct: 462 DYGIIWPDAIAPFQVAIVPMNMHKSERVQQAAEKLYAELTAAGIEVLFDDRKERPGVMFS 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +  +  +P  II GD+   E     +       + V++   I  + 
Sbjct: 522 DMELIGVPHTIIIGDRSMDEGHFEYKNRRQGEKEAVAMESIIDFIQ 567


>gi|323700409|ref|ZP_08112321.1| prolyl-tRNA synthetase [Desulfovibrio sp. ND132]
 gi|323460341|gb|EGB16206.1| prolyl-tRNA synthetase [Desulfovibrio desulfuricans ND132]
          Length = 580

 Score =  143 bits (360), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 46/221 (20%), Positives = 83/221 (37%), Gaps = 11/221 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++E   H+ L R   +  +    SG+  +   G +    +   +R +
Sbjct: 4   SRYYIPTLKEDPADAEVVSHKLLMRAGMIRKL---TSGIYNYLPLGLRAINKVAQIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P V    LW+++G WD Y   +   K  +D     R + L P +     
Sbjct: 61  MNRAGALEVLLPTVQPADLWRETGRWDYYGKELLRFKDRND-----RDYCLGPTHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQ-MFNEC 404
            +    +KSY++LPV L +  + +R+E      GLMR R F   D + F   E       
Sbjct: 116 DLVRGEIKSYKQLPVNLYQVQTKFRDEIRPRF-GLMRGREFIMKDGYSFDKDEAGAEQSY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
             + N   + +   G     V+  +       S      AE
Sbjct: 175 WDMFNAYKAAFTRIGLRFKPVQADSGAIGGSFSHEFMVLAE 215



 Score = 82.9 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 24/175 (13%), Positives = 58/175 (33%), Gaps = 14/175 (8%)

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           G   E+     +G  ++ G          +  A +++ + +  + +M    +   + R +
Sbjct: 399 GGAIEFTKGIEVGHVFKLG-----LKYSKKMEATFLDENGKSQYMIMGCYGI--GVSRIV 451

Query: 536 GIMIENFKGN----LPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRN 588
              IE          P  ++P +  + ++        + A+E+   L    + +  D R 
Sbjct: 452 ASAIEQNFDENGCCFPPSIAPFEVCLISLGGKDQDVADKAEELYAELMKLGVDVAFDDRG 511

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           E    K  E  +   P+ ++ G K      I  +   +    ++ L         
Sbjct: 512 ERPGVKFAEADLIGYPMQLVLGGKGLKNGIIEAKDRKTGEKVELPLDTFAASFAD 566


>gi|304436529|ref|ZP_07396502.1| proline--tRNA ligase [Selenomonas sp. oral taxon 149 str. 67H29BP]
 gi|304370472|gb|EFM24124.1| proline--tRNA ligase [Selenomonas sp. oral taxon 149 str. 67H29BP]
          Length = 569

 Score =  143 bits (360), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 47/221 (21%), Positives = 85/221 (38%), Gaps = 11/221 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            T            E+E   H+ + R   +    +   G+  +    W+  + +   +R 
Sbjct: 3   ATNLYAPTLRNTPAEAEIASHQLMYRAGLIR---KSAGGMYTYLPLAWRTIRKIEQIIRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +EI  P +    LW++SG W +Y A M  VK      +  R F + P +    
Sbjct: 60  EMDAAGGQEIMMPILQPSELWEESGRWGAYGAEMICVKD-----RHGREFCMGPTHEEMI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
            A+    ++SY++LP+ L +    +R+E      G+MR R F   D + F       NE 
Sbjct: 115 TALVRDEVRSYKQLPLMLYQIQDKFRDERRPRF-GVMRSREFIMKDLYSFDKDIAGMNES 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
             K+     +I+   G     V+  +       S+     A
Sbjct: 174 YRKMAVAYTNIFTRCGLNFRAVEADSGAIGGGHSEEFTVLA 214



 Score = 81.8 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 51/151 (33%), Gaps = 8/151 (5%)

Query: 486 AIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
            IGR  + G I  +         A +++    K  P+ +     G        + +N   
Sbjct: 401 HIGRGIEAGQIFALGTKYSEAMGATFLDESG-KTQPLQMGCYGIGVGRTMAAAIEQNHDA 459

Query: 545 NLPLWLSPIQAI------VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           +  +W   I         V       + YA+EI   L++  + +  D R E    K  + 
Sbjct: 460 HGIIWPRAIAPYEVVVVAVNAKVEEQLAYAEEIYEELRAAGVDVLLDDRRERAGVKFNDC 519

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
            +   P+ I  G K     +I ++   S   
Sbjct: 520 DLIGYPVRIAIGPKTIENGTIEVKIRQSGEL 550


>gi|47458979|ref|YP_015841.1| prolyl-tRNA synthetase [Mycoplasma mobile 163K]
 gi|81828486|sp|Q6KIE6|SYP_MYCMO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|47458307|gb|AAT27630.1| prolyl-tRNA synthetase [Mycoplasma mobile 163K]
          Length = 476

 Score =  143 bits (360), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 66/386 (17%), Positives = 147/386 (38%), Gaps = 57/386 (14%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH-LWQQSGHWDSYRANMFAV 321
           G I +    + I++ + S   + IK+ + + +  P ++ +  +  +  H   +   +  V
Sbjct: 37  GNIVFMPNSYGIWENVQSNFNKIIKELNVKNLYLPTLIPESLINSEKDHVQGFAPELITV 96

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           +   D + + + F L+P +       F   L SY +LP+ L ++ +V+R E   +    +
Sbjct: 97  EKVGDKVLNEKLF-LRPTSEVLFAEYFKTQLNSYNDLPLLLNQWANVFRWEK--TTSPFL 153

Query: 382 RVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           R   F   + H    ++E+      K+  +  + +++F    +++   T  EK  G    
Sbjct: 154 RNSEFLWQEGHTSHYSEEEAHQFSKKMIQIYANFFEEFLAIPVIIGQKTESEKFAG---- 209

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV-D 499
                                           A      E ++KD  GR  Q GT     
Sbjct: 210 --------------------------------AHTTYTIEAMMKD--GRALQSGTSHYLG 235

Query: 500 FNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQA 555
            N    F+  + +  + K     +++  +G   R IG +I     N    +P  ++  Q 
Sbjct: 236 QNFAKAFDISFKDKDNSKS---FVYQTSWGISTRLIGAIIMVHGDNRGIIMPPKIATNQV 292

Query: 556 IVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
            + T+        ++ A ++   LK +   +  +  N+++ +K  +  I+  PI I  G 
Sbjct: 293 DIITVFANKNPEVLQKANDLFKTLK-NDFRVRINDSNKSVGFKAAQSEIEGTPIRIEIGP 351

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDA 637
           ++  +  + + R  +     V + + 
Sbjct: 352 EDLKQNKVILIRRDTQEKIDVKIDEL 377


>gi|298499001|ref|ZP_07008808.1| prolyl-tRNA synthetase [Vibrio cholerae MAK 757]
 gi|297543334|gb|EFH79384.1| prolyl-tRNA synthetase [Vibrio cholerae MAK 757]
          Length = 571

 Score =  143 bits (360), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 47/249 (18%), Positives = 94/249 (37%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +   L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R+
Sbjct: 3   TSNYLLSTLKETPNDAEVVSHKLMLRAGMIRKLA---SGLYTWLPTGLRVLRKVENIVRQ 59

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           +I      E   P V    LW+++G  +     +        T +  R F L P      
Sbjct: 60  EIDNAGAIETLMPVVQPFELWEETGRSEKMGPELLRF-----TDRHERPFVLSPTAEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
            A+  + + SY++LP+ L +  + +R+E      G+MR R F   DA+ F   +    + 
Sbjct: 115 TALVRNEVSSYKQLPLNLYQIQTKFRDERRPRF-GVMRAREFCMMDAYSFDIDKAGLEKS 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            + +H      +   G +   V   T      GS      AE+    +  + ++     I
Sbjct: 174 YEAMHVAYCKAFDRMGLDYRPVLADTGAIGGNGSHEFHVLAESGEDLIAFSTESDYAANI 233

Query: 464 NTGVLLGEG 472
                +   
Sbjct: 234 EKAEAVAPA 242



 Score = 86.0 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 28/166 (16%), Positives = 63/166 (37%), Gaps = 13/166 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           + R  + G I Q+  N   + N   ++S+ +    V++    +G  + R +   IE    
Sbjct: 405 LKRGIEVGHIFQLGTNYSEKMNCGVLDSNGKN---VILEMGCYGIGVSRVVAAAIEKNHD 461

Query: 545 N----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +     P  ++P Q  +  +    +    + A+++   L +  + +  D R E       
Sbjct: 462 DYGIIWPDAIAPFQVAIVPMNMHKSERVQQAAEKLYAELTAAGIEVLFDDRKERPGVMFS 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +  +  +P  II GD+   E     +       + V++   I  + 
Sbjct: 522 DMELIGVPHTIIIGDRSMDEGHFEYKNRRQGEKEAVAMESIIDFIQ 567


>gi|260886940|ref|ZP_05898203.1| proline--tRNA ligase [Selenomonas sputigena ATCC 35185]
 gi|260863002|gb|EEX77502.1| proline--tRNA ligase [Selenomonas sputigena ATCC 35185]
          Length = 543

 Score =  143 bits (360), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 45/224 (20%), Positives = 83/224 (37%), Gaps = 13/224 (5%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
            I +   GV  +    W+  + +   +R ++     +E+  P +    +WQ+SG W  + 
Sbjct: 6   MIRKAAGGVYTYLPLAWRTIKKIEQIIREEMDAAGGQELCMPIMQPAEIWQESGRWSVFG 65

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
             MF +K         R F L P +      +    ++SY++LP+ L +  + YR+E   
Sbjct: 66  QEMFRLKDC-----HGREFCLGPTHEEMITTLVRDEVRSYKQLPLLLYQIQNKYRDEIRP 120

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              GLMR R F   D + F   E   +    K+++   +++   G +   V+        
Sbjct: 121 RF-GLMRSREFIMKDLYSFDKDEAGADISYKKMYDAYTNVFTRCGLKFRPVEADAGAIGG 179

Query: 435 VGSDALWDDA-----ENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
             +      A     E       D   N  +  +       E A
Sbjct: 180 NHTHEFTVLAAAGESEIACCTACDYAANVEKAELLPIDASEEEA 223



 Score = 82.9 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 28/198 (14%), Positives = 65/198 (32%), Gaps = 20/198 (10%)

Query: 465 TGVLLGEGAFYGPKFEYILKDAIGRDWQCGT-------------IQVDFNLPSRFNAFYV 511
           TGV            +  L  A      CG               ++         A ++
Sbjct: 342 TGVNPVRDFTDVLTADIRLMAAGDPCPHCGAPVEITRGIEAGQVFKLGTKYSEALGATFL 401

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL---SPIQAIVTTITSSAVEY- 567
           + +  K   + +     G        + ++   +  +W    +P + +V  + + A E  
Sbjct: 402 DENG-KEKALFMGCYGIGVGRTMAAAIEQHNDEHGIIWPRAIAPYEVVVVPVNAKASEQL 460

Query: 568 --AQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
             A+E+  +L +  +    D R +    K ++  +   P+ I  G K   E  I ++   
Sbjct: 461 ALAEEVYEMLLAAGVDAILDDRKDRAGVKFKDADLIGYPLRITIGPKALEEGKIELKVRR 520

Query: 626 STTTQKVSLLDAIPILTK 643
           S  +   +  + +  + +
Sbjct: 521 SGESCDCTKAECLAKVQE 538


>gi|20808197|ref|NP_623368.1| uridine kinase [Thermoanaerobacter tengcongensis MB4]
 gi|20516791|gb|AAM24972.1| Uridine kinase [Thermoanaerobacter tengcongensis MB4]
          Length = 547

 Score =  143 bits (360), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 51/243 (20%), Positives = 89/243 (36%), Gaps = 4/243 (1%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI-EIIT 63
           +K+   D     +P +    D+A           VA  +N ++ DL+  + E S+ E + 
Sbjct: 1   MKIIVKD-REYEYPENTRLEDIARDFEHLYNGIIVAAKVNNELRDLNCTISEDSVVEFVD 59

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
                   + R S   +  +AV+ + P   V I   +  G Y +       ++  +A I+
Sbjct: 60  TTVEEGTRIYRRSLTFVFIKAVKELLPGATVTIEHSLGKGLYCEIHG-YSINNKIVASIK 118

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            KM+EII ++    ++ L  E+A  LFE +    KV + +    KE V +Y      D  
Sbjct: 119 DKMKEIIDKNLKIERKMLPREEAIRLFEKEGLMEKVRLFKD-TDKEKVPVYYCDGTVDFF 177

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
             P V STG +K F       G            S            + +          
Sbjct: 178 YSPCVPSTGYLKVFDIRFYFPGVILIAPDIYNPRSLPVFVDVPKLASIFKEAEEWAHILD 237

Query: 244 RDH 246
            ++
Sbjct: 238 INY 240


>gi|254479305|ref|ZP_05092645.1| Phosphoribulokinase / Uridine kinase family protein
           [Carboxydibrachium pacificum DSM 12653]
 gi|214034753|gb|EEB75487.1| Phosphoribulokinase / Uridine kinase family protein
           [Carboxydibrachium pacificum DSM 12653]
          Length = 547

 Score =  143 bits (360), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 51/243 (20%), Positives = 89/243 (36%), Gaps = 4/243 (1%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI-EIIT 63
           +K+   D     +P +    D+A           VA  +N ++ DL+  + E S+ E + 
Sbjct: 1   MKIIVKD-REYEYPENTRLEDIARDFEHLYNGIIVAAKVNNELRDLNCTISEDSVVEFVD 59

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
                   + R S   +  +AV+ + P   V I   +  G Y +       ++  +A I+
Sbjct: 60  TTVEEGTRIYRRSLTFVFIKAVKELLPGATVTIEHSLGKGLYCEIHG-YSINNKIVASIK 118

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            KM+EII ++    ++ L  E+A  LFE +    KV + +    KE V +Y      D  
Sbjct: 119 DKMKEIIDKNLKIERKMLPREEAIRLFEKEGLMEKVRLFKD-TDKEKVPVYYCDGTVDFF 177

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK 243
             P V STG +K F       G            S            + +          
Sbjct: 178 YSPCVPSTGYLKVFDIRFYFPGVILIAPDIYNPRSLPVFVDVPKLASIFKEAEEWAHILD 237

Query: 244 RDH 246
            ++
Sbjct: 238 INY 240


>gi|82701584|ref|YP_411150.1| prolyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
 gi|114152221|sp|Q2YBW3|SYP_NITMU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|82409649|gb|ABB73758.1| prolyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
          Length = 569

 Score =  143 bits (360), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 50/207 (24%), Positives = 84/207 (40%), Gaps = 11/207 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E   H+ + R      I   GSG+  W   G K+ + + + +R ++      E+  P 
Sbjct: 17  EAELISHKLMLRAG---IIRRLGSGLYTWMPLGLKVLRKVENIVREEMDAAGALELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    LW+++G WD +   M  ++      +  R F   P +      +    +KSYR+L
Sbjct: 74  VQPAELWRETGRWDVFGPQMLKIRD-----RHERDFCFGPTHEEVITDIARREIKSYRQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKD 417
           P+   +  + +R+E      G+MR R F   DA+ F T      E  + +H     I+  
Sbjct: 129 PLNFYQIQTKFRDEVRPRF-GVMRAREFVMKDAYSFHTDIPSLEETYQAMHVAYCRIFDR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDA 444
            G +   VK  T       S      A
Sbjct: 188 LGLKFRPVKADTGAIGGSSSHEFHVLA 214



 Score = 84.1 bits (206), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 28/173 (16%), Positives = 59/173 (34%), Gaps = 16/173 (9%)

Query: 484 KDAIGRDWQCGTI------QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
            D  G+   C  I      Q+         A Y++   +   P+ +     G   R +  
Sbjct: 393 PDGKGKLEICRGIEVGHIFQLLTKYSEAMKANYLDESGQ-ARPMEMGCYGIGVS-RIVAA 450

Query: 538 MIENFKGN----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNE 589
            IE          P  ++P Q ++  I     +     A+++   L S  + +  D R++
Sbjct: 451 AIEQNHDERGIIFPAAMAPFQVVIIPIGLKKNAEVRAEAEKLYATLSSVGIEVLLDDRDD 510

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
                  +  +  IP  ++ G++   E +   R      ++ V L +    + 
Sbjct: 511 RPGVMFADMELIGIPHRVVVGERGLKEGNAEYRGRRDEKSEVVPLPEIADFIK 563


>gi|297584075|ref|YP_003699855.1| prolyl-tRNA synthetase [Bacillus selenitireducens MLS10]
 gi|297142532|gb|ADH99289.1| prolyl-tRNA synthetase [Bacillus selenitireducens MLS10]
          Length = 567

 Score =  142 bits (359), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 44/198 (22%), Positives = 81/198 (40%), Gaps = 11/198 (5%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
            H+ + R   +    +  SGV  +   G+K+ Q + + +R ++     +E+  P +    
Sbjct: 22  SHQLMLRAGLIR---QSTSGVYSFLPLGYKVLQKVEAIVREEMDRAGAQEMFMPSIQPAE 78

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LWQ+SG WD Y A +   K      +  R FAL P +     A+    ++SY+ELP+ L 
Sbjct: 79  LWQESGRWDDYGAELMRFKD-----RHQREFALGPTHEEVITAIVRDDIRSYKELPMTLY 133

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEK 422
           +  + +R+E       L R R F   DA+ F    E +     +++     ++       
Sbjct: 134 QIQTKFRDERRPRFGVL-RGREFLMKDAYSFDVDFEGLDQSYDQMYEAYKKVFTRCDLNF 192

Query: 423 IMVKLSTRPEKRVGSDAL 440
             V   +       +   
Sbjct: 193 RAVVADSGAMGGKDTHEF 210



 Score = 79.1 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 53/140 (37%), Gaps = 7/140 (5%)

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL---SPIQAIVTTITSSAVE 566
            V     K  P+++     G       I+ E+   +  +W    +P QA +  +     E
Sbjct: 425 TVLDDQGKARPIVMGSYGIGVSRTVAAIIEEHHDEDGIIWPLSVAPFQAHLIPVNIKQDE 484

Query: 567 Y---AQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRR 623
               A+ +   L+   L I  D R E    K ++  +  +PI +  G K A E  + ++ 
Sbjct: 485 QKALAESLYTELQESGLDILFDDRQERPGVKFKDSDLLGLPIRVTIGKK-AGEGIVEVKY 543

Query: 624 FGSTTTQKVSLLDAIPILTK 643
             S  T +V   D    + +
Sbjct: 544 RKSGETVEVHRDDLKNTILE 563


>gi|313896347|ref|ZP_07829900.1| proline--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430]
 gi|312975146|gb|EFR40608.1| proline--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430]
          Length = 570

 Score =  142 bits (359), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 48/221 (21%), Positives = 85/221 (38%), Gaps = 11/221 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            T            E+E   HR + R   +    +   G+  +    W+  + +   +R 
Sbjct: 3   ATNLYAPTLRNTPAEAEIASHRLMYRAGLIR---KSAGGMYTYLPLAWRTLRKIEQIIRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +EI  P +    LW++SG W +Y A M  ++      +  R F L P +    
Sbjct: 60  EMDAAGGQEIMMPILQPAELWEESGRWGAYGAEMMRIQD-----RHERAFCLGPTHEEMI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
            A+    L+SY++LPV L +    +R+E      G+MR R F   D + F    E M   
Sbjct: 115 TALVRDELRSYKQLPVMLYQIQDKFRDERRPRF-GVMRSREFIMQDLYSFDKDVEGMHES 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
             K++    +++   G     V+          S+     A
Sbjct: 174 YRKMYEAYTNVFTRCGLNFRAVEADCGAIGGGRSEEFTVLA 214



 Score = 77.9 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 50/151 (33%), Gaps = 8/151 (5%)

Query: 486 AIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
            I R  + G I  +         A +++    K  P+ +     G        + +N   
Sbjct: 402 HISRGIEAGQIFALGTKYSEAMQANFLDVDG-KLKPLQMGCYGIGVGRTMAAAIEQNHDE 460

Query: 545 NLPLWLSPIQAI------VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           +  +W   I         V       + YA+EI   L++  + +  D R E    K  + 
Sbjct: 461 HGIIWPRAIAPYEVVVVAVNAKVEEQLAYAEEIYEELRAAGIDVLLDDRRERAGVKFNDC 520

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
            +   P+ I  G K     SI ++   +   
Sbjct: 521 DLIGYPVRIAIGPKTIENGSIEVKLRRTGEL 551


>gi|290957026|ref|YP_003488208.1| prolyl tRNA synthetase [Streptomyces scabiei 87.22]
 gi|260646552|emb|CBG69649.1| prolyl tRNA synthetase [Streptomyces scabiei 87.22]
          Length = 567

 Score =  142 bits (359), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 41/216 (18%), Positives = 86/216 (39%), Gaps = 11/216 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q           ++E   H+ L R   +   A    GV  W   G K+   +   +R +
Sbjct: 10  SQLMAKTLRDDPADAEVLSHKLLVRAGYVRRTAA---GVWTWLPLGKKVLANVERIVREE 66

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E+  P +L +  ++ +G WD Y   +F +K      +    + L P +     
Sbjct: 67  MDAIGAQEVLLPALLPKEPYEATGRWDEYGPELFRLKD-----RKGGDYLLGPTHEEIFT 121

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +      SY++LPV L +  + +R+E      G++R R F   D++ F T+++   +  
Sbjct: 122 LIVKDQASSYKDLPVILYQIQTKFRDEARPR-AGILRGREFLMKDSYSFDTEDEGLAQSY 180

Query: 406 KIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            +H      +++  G +  +   +        S+  
Sbjct: 181 ALHRAAYQKVFERLGLDYRICAATAGAMGGSKSEEF 216



 Score = 84.1 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 63/163 (38%), Gaps = 10/163 (6%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           + R  + G I Q+            +  H +     M    +   + R +  + E    +
Sbjct: 407 LDRAIEIGHIFQLGRKYADALKLDVLGQHGKPVRVTMGSYGI--GVSRAVAALAEQSADD 464

Query: 546 LPL-WLSPIQA----IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHS 599
             L W + +      +V    +   E A +++  L++  L +  D R   +   K  +  
Sbjct: 465 KGLCWPAEVAPADVHVVAAGKALQTELALDVSEKLRAAGLRVLVDDRAGVSPGVKFTDSE 524

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +  +P I++ G + A    + ++   +   +++++ +AI  LT
Sbjct: 525 LIGVPKILVAGRRSAE-GVLELKDRRTGEREELTVDEAIARLT 566


>gi|59800999|ref|YP_207711.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090]
 gi|81311217|sp|Q5F938|SYP_NEIG1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|59717894|gb|AAW89299.1| putative prolyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090]
          Length = 570

 Score =  142 bits (359), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 46/223 (20%), Positives = 84/223 (37%), Gaps = 11/223 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       E+    H+ + R      I  + SG+  W   G ++ + + + +R 
Sbjct: 3   ASQFFISTLKEAPAEAAFASHKLMIRAG---LIKANASGLYTWMPMGLRVLRKVENVVRE 59

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E+  P V    LWQ+SG W+ Y   +  +K      +  R F + P      
Sbjct: 60  EMARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKD-----RHERDFCMGPTCEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP       + +R+E      G+MR R F   DA+ F          
Sbjct: 115 ADIVRKEINSYKQLPKNFYHIQTKFRDEVRPRF-GVMRAREFVMKDAYSFHADYASLQAT 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
              +++    I+   G     V   T      GS      AE+
Sbjct: 174 YDAMYDAHCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAES 216



 Score = 84.1 bits (206), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 62/171 (36%), Gaps = 12/171 (7%)

Query: 484 KDAIGRDWQCGTIQVDFNLPSR---FNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMI 539
            D  GR      I+V      R     A  V+         ++    +G  I R +   I
Sbjct: 395 PDGQGRLKLARGIEVGHVFQLRGKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAI 454

Query: 540 E-NFKGNLPLW---LSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           E N      +W   ++P + ++  +    + +  E A  I   L +    +  D R+E  
Sbjct: 455 EQNNDEKGIIWTKAMAPFEVVIVPMNYKKSDTVREAADRIYAELLAAGADVLLDDRDERA 514

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
              + +  +  IP  I+ GD+   E ++          Q V++ + +  +T
Sbjct: 515 GVLLNDSELLGIPHRIVIGDRALKEGNVEYAERRGNEAQAVAIGEIVARVT 565


>gi|153806069|ref|ZP_01958737.1| hypothetical protein BACCAC_00320 [Bacteroides caccae ATCC 43185]
 gi|149130746|gb|EDM21952.1| hypothetical protein BACCAC_00320 [Bacteroides caccae ATCC 43185]
          Length = 557

 Score =  142 bits (359), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 46/217 (21%), Positives = 96/217 (44%), Gaps = 3/217 (1%)

Query: 1   MPSDIKLTFPDGSI-KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-S 58
           M   +++   + +I K FP+ ++  D+    + +   + V+  +N +   L+  V     
Sbjct: 1   MKQMLQICCKNNNISKEFPIGSSLLDIYYGFNLNFPYQVVSAKVNNRSEGLNFRVYNNKD 60

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           IE +   D   +     S   ++ +AV  ++PE ++ +   +  G++ +    +P   ++
Sbjct: 61  IEFLDVRDQSGMRTYVRSLCFVLFKAVTELFPEGKLFVEHPVSKGYFCNLRIGRPIELED 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           + +I+++MQEIIA + P+ +      +A  +F  +    KV +LE+         Y  G+
Sbjct: 121 VKRIKQRMQEIIAENIPYHRIECHTAEAVRIFSERGMNDKVRLLET-SGSLYTYYYTLGD 179

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRP 215
             D   G  + STG +K F  +    G   R  S   
Sbjct: 180 TVDYYYGNLLPSTGYLKLFDIVKYYDGLLLRIPSREN 216


>gi|114563918|ref|YP_751432.1| prolyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
 gi|122299171|sp|Q07ZH1|SYP_SHEFN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|114335211|gb|ABI72593.1| prolyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
          Length = 571

 Score =  142 bits (359), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 49/245 (20%), Positives = 90/245 (36%), Gaps = 11/245 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  L+        +E   H+ + R   +     + SG+  W   G ++ + + + +R +
Sbjct: 4   SKYLLSTQKETPANAEVISHQLMLRAGMIR---RNASGLYTWLPSGLRVLRKVEAIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      EI  P V    LW ++G WD +   +   +  ++     R F L P +     
Sbjct: 61  MNKTGAIEILMPLVQPADLWVETGRWDKFGPELLRFQDRNN-----RDFVLGPTHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +    L SY++LP+ L +  + +R+E      G+MR R F   DA+ F    E M N  
Sbjct: 116 DLVRKELSSYKQLPLTLYQVQTKFRDEVRPRF-GVMRAREFLMKDAYSFHLDQETMDNTY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
             +H    +I    G     V   T       S      A +    +  +  +     I 
Sbjct: 175 HAMHTAYSNILTRMGLSFRPVLADTGSIGGSMSHEFHVLANSGEDLIAYSTGSDYAANIE 234

Query: 465 TGVLL 469
                
Sbjct: 235 KAESP 239



 Score = 82.9 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 24/170 (14%), Positives = 62/170 (36%), Gaps = 13/170 (7%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE--- 540
           A+ R  + G I Q+  +     NA  ++ + +     ++    +G  + R +   IE   
Sbjct: 403 AMARGIEVGHIFQLGTSYSKSMNATVLDENGKAQ---VLLMGCYGVGVSRIVAAAIEQNN 459

Query: 541 -NFKGNLPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            +     P  ++P    +  +    +    + A+++   L    + +  D R E      
Sbjct: 460 DDRGITWPEAIAPFTVGILPMNMHKSHRVADIAEKLYQDLADAGVEVLMDDRKERPGVMF 519

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
            +  +  +P +++ GD+         +   +   Q +   + +  LT  +
Sbjct: 520 ADMELIGLPHVVVIGDRNIDAGVFEYKNRRTGEKQDIPFDEIVAFLTNAA 569


>gi|196247600|ref|ZP_03146302.1| Proline--tRNA ligase [Geobacillus sp. G11MC16]
 gi|196212384|gb|EDY07141.1| Proline--tRNA ligase [Geobacillus sp. G11MC16]
          Length = 271

 Score =  142 bits (359), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 53/257 (20%), Positives = 99/257 (38%), Gaps = 27/257 (10%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  +  +     ++E + H+ L R      + +  SGV  +   G ++ Q + + +R +
Sbjct: 4   SQGFIPTFREVPADAEVKSHQLLLRAG---FVRQSASGVYTFLPLGQRVLQKVEAIIREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P +    LWQQSG W SY   +  +K      +  R F L P +     
Sbjct: 61  MNRAGALELLMPALQPAELWQQSGRWYSYGPELMRLKD-----RHERDFVLGPTHEEMIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +    +K+Y+ LP+ L +  + +R+E      GL+R R F   DA+ F T  E +    
Sbjct: 116 TIVRDEVKTYKRLPLILYQIQTKFRDEKRPRF-GLLRGREFIMKDAYSFHTSQESLDETY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            K++    +I++  G     V   +       +             VL  I   +     
Sbjct: 175 NKMYEAYANIFRRCGLNFRAVIADSGAMGGKDTHEF---------MVLSDIGEDT----- 220

Query: 465 TGVLLGEGAFYGPKFEY 481
             +   + + Y    E 
Sbjct: 221 --IAYSDASDYAANIEM 235


>gi|329118470|ref|ZP_08247175.1| proline--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
 gi|327465411|gb|EGF11691.1| proline--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
          Length = 571

 Score =  142 bits (359), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 46/239 (19%), Positives = 83/239 (34%), Gaps = 28/239 (11%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
            H+ + R      I  + SG+  W   G ++ + +   +R +++     E+  P V    
Sbjct: 22  SHKLMIRAG---LIKANASGLYTWMPMGLRVLRKVERVVREEMERAGSVELLMPVVQPAE 78

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LWQ+SG W+ Y   +  +K      +  R F + P        +    + SY++LP    
Sbjct: 79  LWQESGRWEFYGKELLRLKD-----RHERDFCMGPTCEEVITDIVRKEITSYKQLPKNFY 133

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE--CLKIHNLIISIYKDFGFE 421
              + +R+E      G+MR R F   DA+ F    +         +++    I+   G  
Sbjct: 134 HIQTKFRDEVRPRF-GVMRAREFVMKDAYSFHADYESLVRDGYQPMYDAYCRIFDRLGLN 192

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
              V   T      GS      AE+                    +   + + Y    E
Sbjct: 193 YRPVAADTGSIGGTGSHEFQVLAESG----------------EDVIAYSDASDYAANIE 235



 Score = 91.4 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 34/163 (20%), Positives = 70/163 (42%), Gaps = 13/163 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGN 545
           R  + G + Q+     +  NA +++S+ +     ++    +G  I R +   IE N  G 
Sbjct: 406 RGIEVGHVFQLRDKYSAAMNAAFLDSNGKSQ---IMEMGCYGIGITRIVAAAIEQNNDGR 462

Query: 546 LPLW---LSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
             +W   ++P QA++  +    + +  E A +I   L +    +  D R+E     + + 
Sbjct: 463 GIIWTDAMAPFQAVIVPMNYKKSDAVREAADKIYAELCAAGADVLLDDRDERAGVLLADS 522

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            +  IP  I+ GD+   E  +   R   +  Q V++ +A   +
Sbjct: 523 ELLGIPHRIVIGDRGLKEGKVEYARRTDSEAQSVAVEEAAAKV 565


>gi|323705637|ref|ZP_08117211.1| prolyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum LX-11]
 gi|323535114|gb|EGB24891.1| prolyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum LX-11]
          Length = 570

 Score =  142 bits (359), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 47/216 (21%), Positives = 92/216 (42%), Gaps = 11/216 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  +        E+E   H  + +   +  +A   SGV  +   G ++ + +   +R +
Sbjct: 4   SQLFIPTMREVPAEAEIPSHILMLKAAMMRKLA---SGVYIYLPLGKRVLKKIEEIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E+    ++   L ++SG WD +   MF +K  +D     R F L P +     
Sbjct: 61  MDRAGAQEVLMSAIIPAELLKESGRWDVFGPEMFKLKDRND-----REFCLGPTHEEVFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +  + +KSYR+LP+ + +  + YR+E      G+MR R F   DA+ F    + +    
Sbjct: 116 DLIRNDVKSYRQLPLTIYQIQTKYRDERRPRF-GVMRSREFIMKDAYSFDVDWDGLDVSF 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            K+++    I+   G +  +V+  T       S   
Sbjct: 175 DKMYDAYCRIFDRCGLKYTVVEADTGAMGGKDSKEF 210



 Score = 81.8 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 63/175 (36%), Gaps = 11/175 (6%)

Query: 476 GPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
            PK    LK  + R  + G I  +         A Y++ +  +  P+++     G     
Sbjct: 394 CPKCGSPLK--LDRGIEVGHIFKLGTKYSDALGANYIDENGNEK-PIIMGCYGIGLNRIA 450

Query: 535 IGIMIENFKGNLPLWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRN 588
              + +N      +W    +P   I+  +        + A+++ + L    + +  D R+
Sbjct: 451 AAAIEQNHDDKGIIWPMSIAPYHVIIVPVNVSNDVQRDLAEKLYDELSKAGIEVLIDDRD 510

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
                K  +  +  IPI I  G K A +  + ++        ++   + +  + +
Sbjct: 511 LRAGVKFNDADLLGIPIRITVGKK-AEDNIVELKLRREEKPIELKYDEVLGKVKE 564


>gi|295106076|emb|CBL03619.1| prolyl-tRNA synthetase, family II [Gordonibacter pamelaeae
           7-10-1-b]
          Length = 585

 Score =  142 bits (359), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 43/211 (20%), Positives = 85/211 (40%), Gaps = 12/211 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++E   H+ L R   +   A   SGV  +   G ++   +   +R +
Sbjct: 10  SELCVPTLKEDPTDAEIASHKLLLRAGMIRKTA---SGVYTFLPLGKRVLAKVERIVREE 66

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +EI  P +    LW +SG W+ Y   +  +    D     R F L P +     
Sbjct: 67  MDAIGSQEIMMPALQPGELWHESGRWNDYGPELMRLVDRHD-----REFCLGPTHEELIT 121

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           A+  + L+SY+ELP+ L +    +R+E      GL+R R F   DA+ F   ++   +  
Sbjct: 122 ALVRNELRSYKELPLTLYQIQVKFRDEIRPRF-GLLRSREFIMKDAYSFHASQESLQKTY 180

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
              ++  +  +      +  +       ++G
Sbjct: 181 D--DMSAAYGRICERMDMDYRPVEADSGQIG 209



 Score = 92.9 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 65/182 (35%), Gaps = 14/182 (7%)

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
           V  G+     PK    L+ A G +      Q+         A ++     +  P ++   
Sbjct: 388 VQPGDS---CPKCGLPLEGARGIEVS-QVFQLGDKYSKAMGATFMAEDGSEQ-PFLMGCY 442

Query: 527 VFGSIERFIGIMIENFKGNLPLWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHL 580
             G       I+ ++   N   W    +P    V  +T         A+++A  L    L
Sbjct: 443 GVGVSRTMAAIVEQHNDENGIAWPFSVAPAHVCVLPLTVGDDEVQPAAEKLAGDLAKLGL 502

Query: 581 SIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL---DA 637
            +  D R E    K  +  +   P+ ++ G +  +E  + I+   +   + +SL+   DA
Sbjct: 503 EVVIDDRKERAGVKFADADLVGWPLQVVVGKRGLAEGKVEIKHRKTGARRDISLMALTDA 562

Query: 638 IP 639
           + 
Sbjct: 563 VA 564


>gi|262368848|ref|ZP_06062177.1| prolyl-tRNA synthetase [Acinetobacter johnsonii SH046]
 gi|262316526|gb|EEY97564.1| prolyl-tRNA synthetase [Acinetobacter johnsonii SH046]
          Length = 572

 Score =  142 bits (359), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 47/250 (18%), Positives = 97/250 (38%), Gaps = 13/250 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++           ++E   H+ + R   +  +A   SG+  W   G ++   + + +  
Sbjct: 3   ASRFLFATLRETPNDAEVISHQLMLRAGMIRKLA---SGLYTWLPMGVRVLNKVAAIVHE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E+  P      LW++SG +  Y   +   K      +    F L P +    
Sbjct: 60  EMNNAGSLEVLMPVTQPASLWEESGRYVQYGPELLRFKD-----RHGNPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + LKSY++LP    +  + +R+E      G+MR R F   DA+ F + ++   E 
Sbjct: 115 TDLARNELKSYKQLPANFYQVQTKFRDEIRPRF-GVMRSREFIMKDAYSFHSNQESLQET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +++    I+   G +   V+  T      GS      A +    +  + ++     +
Sbjct: 174 YDIMYDAYCKIFTRLGLDFRPVQADTGSIGGSGSHEFHVLASSGEDDIAFSTESDYAANV 233

Query: 464 N--TGVLLGE 471
                VL+GE
Sbjct: 234 EMAEAVLVGE 243



 Score = 90.6 bits (223), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 60/167 (35%), Gaps = 13/167 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           I R  + G I Q+            +    +   P  +    +G  + R +   IE NF 
Sbjct: 409 IKRGIEVGHIFQLGQKYSEALGCKVLGEDGK---PFTVTMGCYGIGVTRVVASAIEQNFD 465

Query: 544 GNLPLWLS---PIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
               +W +   P +  +  +    +  ++E A+ +   L +    +  D RNE    K  
Sbjct: 466 EKGIIWPAAIAPFEVAIVPMNAHKSPRSLEAAEALYAELTTAGYDVLLDDRNERPGVKFS 525

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  +  IP  I+ G+K     +   +      +  +S  + +  + K
Sbjct: 526 DLELTGIPHRIVIGEKGLDAGTFEYKGRRDAESVNISKDELLAKIAK 572


>gi|323144099|ref|ZP_08078739.1| proline--tRNA ligase [Succinatimonas hippei YIT 12066]
 gi|322416114|gb|EFY06808.1| proline--tRNA ligase [Succinatimonas hippei YIT 12066]
          Length = 593

 Score =  142 bits (359), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 51/249 (20%), Positives = 95/249 (38%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  L+       E+    HR + R   +  IA   SG+  W   G ++ Q +   +R 
Sbjct: 24  TSKYLLSTLKENPVEAAVVSHRLMLRAGLIRQIA---SGIYVWLPTGMRVLQKVEKIIRE 80

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LW++SG ++ Y   +  +K      +    F L P +    
Sbjct: 81  ELNRAGAIELFMPFVQPADLWKESGRYEKYGPELCRLKD-----RKKNEFVLGPTHEEVI 135

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
            A+    +KS R+LP+ L +  + +R+E      G+MR R F   DA+ F        + 
Sbjct: 136 TAIARREIKSARQLPINLYQIQTKFRDEIRPRF-GVMRGREFIMKDAYSFHIDHASLEKT 194

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            K +++    I+   G +   V+          S      A+     ++ + K+     I
Sbjct: 195 YKDMYDAYSRIFTRLGLDFRPVEADNGSIGGSSSHEFQVLADAGEDTIVFSDKSDYAANI 254

Query: 464 NTGVLLGEG 472
                L   
Sbjct: 255 EMAEALAPA 263



 Score = 92.9 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 60/155 (38%), Gaps = 9/155 (5%)

Query: 497 QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGNLPLW---LS 551
           QV         +       E   P+ +    +G  + R I   IE +      +W   ++
Sbjct: 436 QVFMLGTKYSESMGATVLGEDGKPINMQMGCYGIGVTRVIAAAIEQHHDDKGIIWPDSMA 495

Query: 552 PIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIII 607
           P Q  +  I    + +  E A+++   L++  + +  D R+E       +  +  IP +I
Sbjct: 496 PFQVAIVAIKPNKSQAVREAAEKLYAELEAKGVEVLYDDRDERPGVMFADMELIGIPHVI 555

Query: 608 ICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             GD+  +  S+  +   +   ++VS+   +  + 
Sbjct: 556 TIGDRGLAAGSVEYKSRKTGQKEEVSVDKILDFVC 590


>gi|116620962|ref|YP_823118.1| prolyl-tRNA synthetase [Candidatus Solibacter usitatus Ellin6076]
 gi|122255000|sp|Q027I0|SYP_SOLUE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|116224124|gb|ABJ82833.1| prolyl-tRNA synthetase [Candidatus Solibacter usitatus Ellin6076]
          Length = 480

 Score =  142 bits (359), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 66/418 (15%), Positives = 159/418 (38%), Gaps = 56/418 (13%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
            ++ +  + D+   AE   G +     G+ +++ L   +  + K  +++ +  P ++ Q 
Sbjct: 16  WYQDVVLQGDMAEPAEIVKGCMVIKANGYAVWEVLQRELDDRFKATNHQNVYFPLLIPQS 75

Query: 304 L-WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
              +++ H + +   +  V  A     +   + ++P +       F+  + SYR+LP+  
Sbjct: 76  FLKKEAEHVEGFAPELAVVTVAGGKELE-EPYVIRPTSETIIGHFFSKWIHSYRDLPLLY 134

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFE 421
            ++ +V R E        +R   F   + H   +  E+   E L+I +L   + +D    
Sbjct: 135 NQWANVIRWELR--TRMFLRTTEFLWQEGHTAHSNHEEAVEEVLRILDLYAQVAEDIMAM 192

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            ++  + T  EK  G           +K                              E 
Sbjct: 193 PVIKGVKTHAEKFAG----------ALKS--------------------------YSIEA 216

Query: 482 ILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI- 539
           ++++  G   Q GT   +  N    F+  + +   +  +   + +  +G   R IG +I 
Sbjct: 217 MMQN--GLALQAGTSHDLGQNFGKAFDVQFQSKEGQLEY---VWQTSWGVSTRLIGGLIM 271

Query: 540 ---ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLK-SHHLSIETDFR-NETINYK 594
              ++    LP  L+P+++++  I     E A  +    + +  +  + D R  ++   K
Sbjct: 272 THSDDKGLVLPPKLAPVKSVIVPIYRKEEERAAVLEAAHRIAKEIGAKVDDREGQSPGAK 331

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
                 + +P+++  G ++ +   I ++R  + T + +   +    +   +   D QK
Sbjct: 332 FFHWERRGVPVVLELGPRDLASGKIVLKRRDTGTKEPIDQSEVGAKVA--AALEDMQK 387


>gi|114152276|sp|Q5E719|SYP_VIBF1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
          Length = 571

 Score =  142 bits (359), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 48/248 (19%), Positives = 97/248 (39%), Gaps = 11/248 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R+
Sbjct: 3   TSKYLLSTLKETPNDAEVVSHQLMLRAGMIRRLA---SGLYTWLPTGLRVLRKVENIVRQ 59

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           +I      E   P V    LW+++G  +     +        T + +R F L P      
Sbjct: 60  EIDNAGAIETLMPVVQPFELWEETGRSEKMGPELLRF-----TDRHVRPFVLSPTAEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNE 403
            ++  + + SY++LP+ L +  + +R+E      G+MR R F   DA+ F   KE +   
Sbjct: 115 TSLVRNEVSSYKQLPLNLYQIQTKFRDERRPRF-GVMRAREFCMMDAYSFDINKEGLQKS 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +H+     +   G E   V   +      GS      AE+    +  + ++     I
Sbjct: 174 YDAMHDAYCKAFDRMGLEYRPVLADSGAIGGSGSQEFHVLAESGEDLIAFSTESDYAANI 233

Query: 464 NTGVLLGE 471
                +  
Sbjct: 234 EKAEAVAP 241



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 63/168 (37%), Gaps = 13/168 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           + R  + G I Q+        N   ++++ +    V++    +G  + R +   IE    
Sbjct: 405 LKRGIEVGHIFQLGTAYSEAMNCGVLDANGKN---VILEMGCYGIGVSRVVASAIEQNND 461

Query: 545 N----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                 P  ++P    +  +    +    E A+++   L +  + +  D R E      +
Sbjct: 462 EYGIVWPEAIAPFTVAIVPMNMHKSERVKEAAEKLYAELTAMGIEVLFDDRKERPGVMFK 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  +  IP  I+ GD+   E     +   + T + V + + +  +  +
Sbjct: 522 DIELIGIPHTIVIGDRSMDEGHFEYKNRRANTKEAVEMANIVEHIKAQ 569


>gi|310818519|ref|YP_003950877.1| prolyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|309391591|gb|ADO69050.1| Prolyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
          Length = 477

 Score =  142 bits (359), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 68/396 (17%), Positives = 146/396 (36%), Gaps = 59/396 (14%)

Query: 261 DGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH-LWQQSGHWDSYRANM 318
           D  G +     G+ +++ +   + +  KD  ++    P ++ +  L +++ H + +   +
Sbjct: 30  DVKGCMVIRPNGYALWENMQRVLDKMFKDLGHKNAYFPLLIPESYLKKEAEHVEGFNPQL 89

Query: 319 FAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLH 378
             V  A    K      ++P +       F   ++SYR+LP+ + ++ +V R E      
Sbjct: 90  AVVTHAGG-AKLEEPLVIRPTSETIINRSFAKWIQSYRDLPLLINQWANVMRWEMR--TR 146

Query: 379 GLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD 438
             +R   F   + H     E       K    ++ +Y+ F                    
Sbjct: 147 LFLRTTEFLWQEGHTCHETEADAE---KETLQMLEVYRTF-------------------- 183

Query: 439 ALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ- 497
                AE+ M   + T + S  +R         GA      E +++D   +  Q GT   
Sbjct: 184 -----AEDYMAMPVLTGRKSETERF-------AGALRTYSIEAMMQD--KKALQAGTSHN 229

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPI 553
           +  N    F+  +     ++ H   + +  +G   R IG +I    ++    +P  L+P 
Sbjct: 230 LGQNFAKAFDTQFQGRDGKQHH---VWQTSWGVSTRLIGGLIMTHSDDAGLVVPPRLAPT 286

Query: 554 QAIVTTI--------TSSAVEYAQEIANLLKSHHLSIETDFRN-ETINYKIREHSIKKIP 604
             ++  I         +  +E    +A  L+   L++  D  + ++  +K  EH +    
Sbjct: 287 HVVIIPILGKAADAEKTQVLEKVHAMAADLRRAGLNVLVDDDDTKSPGFKYNEHEVVGTC 346

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
           + +  G K+ ++ S  + R      + V L  A+  
Sbjct: 347 LRVELGPKDLAKDSCVMVRRDVRQKEFVPLAQAVEK 382


>gi|260892490|ref|YP_003238587.1| prolyl-tRNA synthetase [Ammonifex degensii KC4]
 gi|260864631|gb|ACX51737.1| prolyl-tRNA synthetase [Ammonifex degensii KC4]
          Length = 574

 Score =  142 bits (359), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 51/220 (23%), Positives = 86/220 (39%), Gaps = 11/220 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           T   +        E+E   HR L R   +  +A    G+      G ++   + S +R +
Sbjct: 4   TTWLVPTLREVPAEAEVASHRLLLRAGFIRRVAA---GIYTLLPLGKRVLAKIESIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +EI  P +    LW +SG W+ Y   +F +K      +  R F L P +     
Sbjct: 61  MNRAGGQEILMPILQPAELWHRSGRWEVYGPELFRLKD-----RHGRDFCLGPTHEEMIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           A+    ++SY++LP+ L + G+ YR+E      GL+R R F   D + F        E  
Sbjct: 116 ALVAAEVRSYKQLPLLLYQIGNKYRDERRPRF-GLLRGREFIMKDLYSFDRDWAGLEESY 174

Query: 406 -KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
            K++     ++   G     V+  T       S      A
Sbjct: 175 RKMYEAYTRVFTRVGLNFRAVEADTGAIGGSVSHEFMALA 214



 Score = 95.2 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 66/161 (40%), Gaps = 9/161 (5%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I Q+        NA+Y++   EK  P+++     G       ++ ++      
Sbjct: 403 RGIEVGQIFQLGDKYSRALNAYYLDEKGEK-RPIIMGCYGIGITRTMAAVVEQHHDEEGI 461

Query: 548 LWL---SPIQAIVTTITSS---AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W    +P Q +V  +        E A+EI NLL+   + +  D R E    K ++  + 
Sbjct: 462 IWPLAVAPFQVLVLPVNYEEVPQREVAEEIYNLLREKGIEVLLDDREERPGVKFKDADLV 521

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             P+ I  G + A+E  + ++   +  T  V   + +  + 
Sbjct: 522 GYPLRITVG-RHAAEGKVELKLRRTGETWLVDKDEVLEKVA 561


>gi|163750377|ref|ZP_02157617.1| prolyl-tRNA synthetase [Shewanella benthica KT99]
 gi|161329867|gb|EDQ00853.1| prolyl-tRNA synthetase [Shewanella benthica KT99]
          Length = 569

 Score =  142 bits (359), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 44/245 (17%), Positives = 93/245 (37%), Gaps = 11/245 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  L+       ++E   H+ + R   +     + SG+  W   G ++ + + + +R +
Sbjct: 4   SKYLLSTQKETPADAEVVSHQLMLRAGMVR---RNASGLYSWLPTGLRVLRKVEAIVREE 60

Query: 287 IK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      EI  P V    LW ++G W+ +   +   K      +  R F L P +     
Sbjct: 61  MNKAGAIEILMPMVQPADLWIETGRWEKFGPELLRFKD-----RHNRDFVLGPTHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    + SY++LP+ L +  + +R+E      G+MR R F   DA+ F   ++  +   
Sbjct: 116 DIIRKEINSYKQLPLTLYQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHLDQESMDVTY 174

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
             +     +I++  G     V   T       S      A++    +  + ++     I 
Sbjct: 175 DTMFQAYNNIFERMGLSFRPVLADTGSIGGSMSHEFHVLADSGEDLIAYSTESDYAANIE 234

Query: 465 TGVLL 469
                
Sbjct: 235 KAEAP 239



 Score = 78.7 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 22/166 (13%), Positives = 59/166 (35%), Gaps = 11/166 (6%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           A+ R  + G I Q+  N     +A  ++ + +    +++     G   R +   IE    
Sbjct: 403 ALLRGIEVGHIFQLGTNYSESMHANVLDKNGKSKT-LLMGCYGVGVS-RIVAAAIEQNHD 460

Query: 545 N----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +     P  ++P +  +  +    +    + A+++   L    + +  D R E       
Sbjct: 461 DRGIIWPAAIAPFKVGILPMNMHKSHRVKDMAEKLYQDLNDAGIEVLFDDRKERPGVMFA 520

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +  +  +P +++ GD+         +   +   + +     +  L 
Sbjct: 521 DMELVGLPHVVVIGDRNIDNGVFEYKNRRTGEKRDIPFDQLLDFLK 566


>gi|167586051|ref|ZP_02378439.1| prolyl-tRNA synthetase [Burkholderia ubonensis Bu]
          Length = 578

 Score =  142 bits (359), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 53/287 (18%), Positives = 106/287 (36%), Gaps = 13/287 (4%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ + R   +  +A    G+  +   G +  + + + +R ++      E+  P 
Sbjct: 17  DAEIVSHKLMVRAGMIRRVA---GGIYNYLPIGLRSIRKVEAIVREEMNRAGAIELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    LWQ+SG W+ Y   +   K   D       F + P +      +  + ++SYR++
Sbjct: 74  VQPAELWQESGRWEQYGPELLRFKDRKDN-----EFVIGPTHEEVITDIARNQIRSYRQM 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKD 417
           PV   +  + +R+E      G+MR R F   DA+ F    + +     K+++  + I+  
Sbjct: 129 PVNFYQIQTKFRDEIRPRF-GVMRGREFIMKDAYSFDKDADGLAESYRKMYDAYVRIFTR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
            G E   V   +       S      A+     +     +     I     L   A    
Sbjct: 188 LGLEFRPVAADSGSIGGNFSHEFHVIADTGEDAIAYCPSSDFAANIEAAEALPLIAERAA 247

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLP--SRFNAFYVNSHSEKCHPVM 522
             E + K A     +C  +     +P      +  + + +E   P +
Sbjct: 248 AAEPMAKVATPGKAKCEAVAELMGIPLARTIKSIVLATDNEGAEPTI 294



 Score = 79.1 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 24/164 (14%), Positives = 60/164 (36%), Gaps = 11/164 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNL 546
           R  + G + Q+         A +++   +   P+++     G I R +G  IE NF    
Sbjct: 409 RGIEVGHVFQLGTKYSEAMGATFIDESGKPQ-PMLMGCYGVG-ITRILGAAIEQNFDDRG 466

Query: 547 PLWL---SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
            +W    +P + ++  +    + +  E   ++   L +  + +  D R E       +  
Sbjct: 467 IIWPESIAPFEVVLCPMGYDRSDAVREATDKLYAELAAAGIDVILDDRGERPGVMFADWE 526

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  +P  ++ G++   E  +  +         +    A   + +
Sbjct: 527 LIGVPHRLVIGERGLKEGKLEYQGRRDAEATLLPADTAAATVVE 570


>gi|328724240|ref|XP_001946260.2| PREDICTED: bifunctional aminoacyl-tRNA synthetase-like [Acyrthosiphon
            pisum]
          Length = 1657

 Score =  142 bits (359), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 72/419 (17%), Positives = 140/419 (33%), Gaps = 85/419 (20%)

Query: 260  EDGSGVIFWHRKGWKIFQTLISYMRRKIKD---DYEEINTPQVLDQHLWQ-QSGHWDSYR 315
             D SG        ++I++ +  +   +IK    +      P  + Q   + +  H   + 
Sbjct: 1149 YDVSGCYVLRPWAYRIWELIQEWFDARIKRKPLNIRNCYFPMFVSQGALEREKEHIADFA 1208

Query: 316  ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
              +  V  + +T       A++P +  G    F   ++SYR+LP++L ++ SV R E   
Sbjct: 1209 PEVAWVTKSGETDL-AEPIAIRPTSETGMYPAFAKWIQSYRDLPLKLNQWNSVVRWEFKH 1267

Query: 376  SLHGLMRVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
                 +R R F   + H  + T+E+   + L        +YK+     ++    T  EK 
Sbjct: 1268 P-QPFLRTREFLWQEGHNAYATREEAERDVLITLGYYEYVYKNMLAVPVIKGKKTEKEKF 1326

Query: 435  VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
             G                                      +    E  +  + GR  Q  
Sbjct: 1327 AGGI------------------------------------FTTTCEAYV-ASSGRAIQGA 1349

Query: 495  TIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP- 552
            T      N    F+  + +  + +     +H+  FG   R IG+M+     +  L L P 
Sbjct: 1350 TSHYLGTNFAKMFDVHFEHPDTHEKS--FVHQISFGMTTRTIGVMVMVHGDDRGLVLPPR 1407

Query: 553  ---IQAIVTT----------ITSSAVEYAQEIANLLK---------------------SH 578
               IQ I+            +  + +    ++ N LK                     S 
Sbjct: 1408 IASIQVIIVPCGVGVSTANEVKDNLIRTCLDVCNRLKGDSLIETDDENDNSVIQHRNSSL 1467

Query: 579  HLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERS-IGIRRFGSTTTQKVSLL 635
             +  +TD R+  +  +K     +K +P+ +  G K+      + +R   +     + L 
Sbjct: 1468 MIRADTDLRDNYSPGWKFNHWELKGVPLRLEIGPKDLDRNQMVAVR-RDNGDKLTIPLE 1525


>gi|297626631|ref|YP_003688394.1| Prolyl-tRNA synthetase (Proline--tRNA ligase) (ProRS)
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
 gi|296922396|emb|CBL56968.1| Prolyl-tRNA synthetase (Proline--tRNA ligase) (ProRS)
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
          Length = 588

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 50/222 (22%), Positives = 91/222 (40%), Gaps = 11/222 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +         +E   HR L R   +  +A    G+  W   G K+ Q + + +R +
Sbjct: 2   SKLFVRTLRDDPAAAEIPSHRFLVRAGYIRRVA---PGIYSWLPLGLKVLQRVENIVREE 58

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E+  P +L +  ++ S  W  Y  N+F +       +      L P +     
Sbjct: 59  MDAMGGQEVLLPALLPREPYEISNRWAEYGPNLFRLVD-----RKGADMLLGPTHEEMFT 113

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNEC 404
            +      SY++LPV L +  + YR+E      G++R R F   D++ F    E +    
Sbjct: 114 LLVKDLYSSYKDLPVILYQIQTKYRDEARPR-AGILRGREFVMKDSYSFDVDDEGLDASY 172

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
           LK  +  I I+   GFE ++VK +        S+     +EN
Sbjct: 173 LKHRDAYIRIFDRLGFEYVIVKANAGAMGGSASEEFLALSEN 214



 Score = 86.4 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 25/160 (15%), Positives = 64/160 (40%), Gaps = 10/160 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE----NFK 543
           R  + G I Q+        +   ++ + +     M    +   + R +G++ E    +  
Sbjct: 424 RGVEMGHIFQLGRKYAESLDLKVLDKNGKLVTVTMGSYGI--GVSRAVGMIAESTCDDKG 481

Query: 544 GNLPLWLSPIQAIVTTITS--SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
              P  ++P Q  +         +E A  IA  L +  + +  D R  +   K  +  + 
Sbjct: 482 LCWPAEVAPFQVQIVATGKGGEILEAATRIAEQLDAAGVRVLLDDRKASPGVKFTDAELL 541

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            +P  ++ G +  ++  + +R   + + ++VS+ +A+  +
Sbjct: 542 GMPTSLVVG-RGLADGVVELRDRKTGSKREVSVEEAVDEV 580


>gi|317476420|ref|ZP_07935669.1| uridine kinase [Bacteroides eggerthii 1_2_48FAA]
 gi|316907446|gb|EFV29151.1| uridine kinase [Bacteroides eggerthii 1_2_48FAA]
          Length = 557

 Score =  142 bits (358), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 46/241 (19%), Positives = 100/241 (41%), Gaps = 3/241 (1%)

Query: 1   MPSDIKLTFPDGSI-KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-S 58
           M   +++   + +I K FP+ ++  D+    + +   + V+  +N +   L+  V     
Sbjct: 1   MKHMLQICCKNNNIYKEFPIGSSLLDIYYGFNLNFPYQVVSAKVNNRSEGLNFRVYNNKD 60

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           +E +   D   +     S   I+ +AV  ++P+ ++ +   +  G++ +    +P   ++
Sbjct: 61  VEFLDVRDSSGMRTYVRSLCFILYKAVNELFPDGKLFVEHPVSKGYFCNLRIGRPIELED 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           ++ I+++MQEIIA D PF +      +A  +F  +    KV++LE+         Y  G+
Sbjct: 121 VSAIKRRMQEIIAEDIPFRRTECHTTEAVRVFSERGMNDKVKLLET-SGSIYTYYYTLGD 179

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             D   G  + STG +K F  +    G   R  +                 ++ +     
Sbjct: 180 TVDYYYGNLLPSTGFIKLFDIVKYYDGLLLRIPNKENPAVLEDVVKQEKMLDVFKEHLRW 239

Query: 239 E 239
            
Sbjct: 240 N 240


>gi|172087674|ref|YP_204065.3| prolyl-tRNA synthetase [Vibrio fischeri ES114]
 gi|59479390|gb|AAW85177.1| prolyl-tRNA synthetase [Vibrio fischeri ES114]
          Length = 575

 Score =  142 bits (358), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 48/248 (19%), Positives = 97/248 (39%), Gaps = 11/248 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R+
Sbjct: 7   TSKYLLSTLKETPNDAEVVSHQLMLRAGMIRRLA---SGLYTWLPTGLRVLRKVENIVRQ 63

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           +I      E   P V    LW+++G  +     +        T + +R F L P      
Sbjct: 64  EIDNAGAIETLMPVVQPFELWEETGRSEKMGPELLRF-----TDRHVRPFVLSPTAEEVI 118

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNE 403
            ++  + + SY++LP+ L +  + +R+E      G+MR R F   DA+ F   KE +   
Sbjct: 119 TSLVRNEVSSYKQLPLNLYQIQTKFRDERRPRF-GVMRAREFCMMDAYSFDINKEGLQKS 177

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +H+     +   G E   V   +      GS      AE+    +  + ++     I
Sbjct: 178 YDAMHDAYCKAFDRMGLEYRPVLADSGAIGGSGSQEFHVLAESGEDLIAFSTESDYAANI 237

Query: 464 NTGVLLGE 471
                +  
Sbjct: 238 EKAEAVAP 245



 Score = 76.4 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 63/168 (37%), Gaps = 13/168 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           + R  + G I Q+        N   ++++ +    V++    +G  + R +   IE    
Sbjct: 409 LKRGIEVGHIFQLGTAYSEAMNCGVLDANGKN---VILEMGCYGIGVSRVVASAIEQNND 465

Query: 545 N----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                 P  ++P    +  +    +    E A+++   L +  + +  D R E      +
Sbjct: 466 EYGIVWPEAIAPFTVAIVPMNMHKSERVKEAAEKLYAELTAMGIEVLFDDRKERPGVMFK 525

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  +  IP  I+ GD+   E     +   + T + V + + +  +  +
Sbjct: 526 DIELIGIPHTIVIGDRSMDEGHFEYKNRRANTKEAVEMANIVEHIKAQ 573


>gi|169836558|ref|ZP_02869746.1| prolyl-tRNA synthetase [candidate division TM7 single-cell isolate
           TM7a]
          Length = 282

 Score =  142 bits (358), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 56/240 (23%), Positives = 103/240 (42%), Gaps = 11/240 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  L  Y    +E+E   H+ + R   +  +     GV  +   G+K+ + + + +R +
Sbjct: 4   SKAFLKTYKEAPKEAEVISHKLMLRASMIRQL---TRGVYSYLPLGYKVLKKIENIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +EI  P +    LW++SG W +Y + +  +K  ++     R FAL P +     
Sbjct: 61  MDRAGSQEILMPVLQPASLWEESGRWFAYGSELMRMKDRNE-----REFALGPTHEEVVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNEC 404
            +  + + SY+ELP  L +  + +R+E      GLMR R F   DA+ F  TKE +  E 
Sbjct: 116 DIVRNTITSYKELPFNLYQIQTKFRDEMRPRF-GLMRGREFLMKDAYSFHLTKESLDEEF 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
           L + N    I +    +   V   +       S+     AEN    +L +  +     + 
Sbjct: 175 LNMKNAYSRILERMELKFRAVDADSGSIGGDASNEFMVLAENGEDDILYSDSSDYAANVE 234


>gi|160891492|ref|ZP_02072495.1| hypothetical protein BACUNI_03943 [Bacteroides uniformis ATCC 8492]
 gi|317478402|ref|ZP_07937565.1| uridine kinase [Bacteroides sp. 4_1_36]
 gi|156858899|gb|EDO52330.1| hypothetical protein BACUNI_03943 [Bacteroides uniformis ATCC 8492]
 gi|316905438|gb|EFV27229.1| uridine kinase [Bacteroides sp. 4_1_36]
          Length = 557

 Score =  142 bits (358), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 45/207 (21%), Positives = 94/207 (45%), Gaps = 3/207 (1%)

Query: 1   MPSDIKLTFPDGSI-KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-S 58
           M   +++   + +I K FP+ ++  D+    + +   + V+  +N +   L+  V     
Sbjct: 1   MKHMLQICCKNNNISKEFPIGSSLLDIYYGFNLNFPYQVVSAKVNNRSEGLNFRVYNNKD 60

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           +E +   D   +     S   I+ +AV  ++PE ++ +   +  G++ +    +P   ++
Sbjct: 61  VEFLDIRDSSGMRTYVRSLCFILYKAVSELFPEGKLFVEHPVSKGYFCNLRIGRPIELED 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           +A I+K+MQEIIA + P+ +      +A  +F  +    KV++LE+         Y  G+
Sbjct: 121 VAAIKKRMQEIIAENIPYHRVECHTTEAVRIFNERGMNDKVKLLET-SGSLYTYYYTLGD 179

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAG 205
             D   G  + STG +  F  +    G
Sbjct: 180 TVDYYYGNLLPSTGYIWLFDIVKYYDG 206


>gi|71064999|ref|YP_263726.1| prolyl-tRNA synthetase [Psychrobacter arcticus 273-4]
 gi|114152234|sp|Q4FUL6|SYP_PSYA2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|71037984|gb|AAZ18292.1| prolyl-tRNA synthetase, class IIa [Psychrobacter arcticus 273-4]
          Length = 572

 Score =  142 bits (358), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 48/246 (19%), Positives = 96/246 (39%), Gaps = 13/246 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q           +++    + + R   +  IA   SG+  W   G ++ Q +   +R 
Sbjct: 3   ASQFLFATLKETPSDADIASSQLMVRAGLIRKIA---SGLYIWLPMGLRVLQKVERIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++++   +E+  P      LWQ +G ++ Y   +   K   D     R F L P +    
Sbjct: 60  EMQNIGAQEVLMPMTQPAELWQMTGRFNDYGPELLRFKDRHD-----RDFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    L+SY++LP+   +  + +R+E      G+MR R FT  DA+ F   +    + 
Sbjct: 115 TNLAQGELRSYKQLPITFFQIQNKFRDEIRPRF-GVMRAREFTMKDAYSFHVDQASLAKT 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +++    I+   G +   V+  T       S      A++    +     +SS+   
Sbjct: 174 YDDMYDAYTRIFTRLGLDFRAVQADTGSIGGFASHEFHVLADSGEDDI--AFSDSSEYAA 231

Query: 464 NTGVLL 469
           N  +  
Sbjct: 232 NVELAE 237



 Score = 80.2 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 64/171 (37%), Gaps = 18/171 (10%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           I R  + G I Q+        N        +   PV +    +G  + R I   IE N  
Sbjct: 403 IKRGIEVGHIFQLGNKYSQAMNCTVSGDDGK---PVTLMMGCYGIGVSRIIAAAIEQNND 459

Query: 544 GNLPLW---------LSPIQAIVTTITSS---AVEYAQEIANLLKSHHLSIETDFRNETI 591
            N  +W         L+P +  +  + S     ++ A  + + LK+  +++  D RNE  
Sbjct: 460 ENGIMWPLTPNISDSLAPFEVAIVPMKSKEETVMQTATALYDELKALGVNVLLDDRNERP 519

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             K  +  +  IP  I+  D+  +E          T  Q +S  + +  ++
Sbjct: 520 GVKFADLELIGIPHRIVVSDRNLAEDKYEYINRRDTEKQLLSRDEVLAKVS 570


>gi|330815470|ref|YP_004359175.1| Prolyl-tRNA synthetase [Burkholderia gladioli BSR3]
 gi|327367863|gb|AEA59219.1| Prolyl-tRNA synthetase [Burkholderia gladioli BSR3]
          Length = 578

 Score =  142 bits (358), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 56/287 (19%), Positives = 108/287 (37%), Gaps = 13/287 (4%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ + R   +  +A    G+  +   G +  + + + +R ++      E+  P 
Sbjct: 17  DAEIVSHKLMVRAGMIRRVA---GGIYNYLPVGLRSIRKVEAIVREEMNRAGAIELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    LWQ+SG W+ Y   +  +K   D       F + P +      +  + +KSYR++
Sbjct: 74  VQPAELWQESGRWEQYGPELLRIKDRKDN-----DFVIGPTHEEVITDIARNQIKSYRQM 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKD 417
           PV   +  + +R+E      G+MR R F   DA+ F   +    E   K+++  + ++  
Sbjct: 129 PVNFYQIQTKFRDEIRPRF-GVMRGREFIMKDAYSFDKDQAGLKESYRKMYDAYVRVFTR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
            G E   V          GS      A+     +     +     +     L   A    
Sbjct: 188 IGLEFRAVAADNGSIGGSGSHEFHVIADTGEDAIAYCPSSEFAANVEAAEALPLIASRAA 247

Query: 478 KFEYILKDAIGRDWQCGTIQ--VDFNLPSRFNAFYVNSHSEKCHPVM 522
             E + K A     +C  +   +D  L     +  V + +E   P +
Sbjct: 248 PAEAMAKVATPGKAKCEAVAELLDIPLARTIKSIIVATENEGAEPTI 294



 Score = 75.2 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 26/157 (16%), Positives = 53/157 (33%), Gaps = 9/157 (5%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNLP 547
           R  + G +       S+           K  P+ +     G I R +G  IE NF     
Sbjct: 409 RGIEVGHVFQLGTKYSKAMGSTFLDEGGKPQPMEMGCYGIG-ITRILGAAIEQNFDDKGI 467

Query: 548 LWL---SPIQAIVTTITSSAVEYAQEIANLLKS----HHLSIETDFRNETINYKIREHSI 600
           +W    +P + ++  +     E  +  A+ L +      + +  D R E       +  +
Sbjct: 468 IWPESIAPFEVVLCPMGYDRSEAVRNAADQLHADLLAAGIDVILDDRGERPGVMFADWEL 527

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
             +P  ++ G++   +  I  +    T    +    A
Sbjct: 528 IGVPHRLVIGERGLKDGKIEYQGRRDTEASLLPAEGA 564


>gi|297243824|ref|ZP_06927754.1| prolyl-tRNA synthetase [Gardnerella vaginalis AMD]
 gi|296888245|gb|EFH26987.1| prolyl-tRNA synthetase [Gardnerella vaginalis AMD]
          Length = 604

 Score =  142 bits (358), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 50/290 (17%), Positives = 100/290 (34%), Gaps = 23/290 (7%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
           +I +   GV  W   G K+   + + +R +I     +E++ P +L +  ++ +  W+ Y 
Sbjct: 29  YIRKSAPGVWTWLPLGLKVLNKVQAIIREEINGIGAQEVHFPALLPREPYEATNRWEEYG 88

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            N+F +K      +    + L P +      +      SY++LPV L +  + YR+E   
Sbjct: 89  DNIFRLKD-----RHEADYLLAPTHEEVFTLLVKDMYSSYKDLPVTLYQIQTKYRDEFRP 143

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              GL+R R F   D + F   E        +       I+   G + ++V   + P   
Sbjct: 144 R-AGLIRGREFIMQDGYSFSIDEDGLKSAYVEERAAYARIFNRLGIKYVIVHAVSGPMGG 202

Query: 435 VGSDAL----------WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP---KFE- 480
             S+            +  A +     ++ +       ++        A   P     E 
Sbjct: 203 SDSEEFLAPMPIGEDTFALAPSGKAWNVEALTTPEMSDVDYSATPAAEALETPDAKTIEA 262

Query: 481 -YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG 529
              + + +         Q D  L +   A    + +E        R +  
Sbjct: 263 LVKVSNDLHPRKDGREWQADDTLKNLIIAVKHPADAEGGEHEEPWREIVA 312



 Score = 94.1 bits (232), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 28/164 (17%), Positives = 63/164 (38%), Gaps = 12/164 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN- 545
           R  + G + Q+            +N + +    V +    +G  + R I  + E    + 
Sbjct: 436 RGVEIGQVFQLGLKYSKALGLSVLNENGKA---VPVWMGCYGIGVSRVIACLAETHHDDA 492

Query: 546 ---LPLWLSPIQAIVTTITSSAVEY--AQEIANLLKSHHLSIETDFRNE-TINYKIREHS 599
               P+ ++P Q  V       V +  A+++   L    + +  D R + +   K ++  
Sbjct: 493 GLAWPMAIAPAQVHVVATGKDQVAFDAAEKVVEELSKQGIEVIFDDRPKVSPGVKFKDAE 552

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  +P+I + G    +  +I IR    +  + V + +A   + K
Sbjct: 553 LVGVPLIAVAGRDTVNNGTIEIRDRNGSNVEAVPVDEAASRIVK 596


>gi|297280760|ref|XP_002808297.1| PREDICTED: LOW QUALITY PROTEIN: bifunctional aminoacyl-tRNA
            synthetase-like [Macaca mulatta]
          Length = 1527

 Score =  142 bits (358), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 72/443 (16%), Positives = 142/443 (32%), Gaps = 66/443 (14%)

Query: 226  NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
              +Q         EE+    + ++  + ++     D SG        + I++ +  +   
Sbjct: 1015 PKKQTRLGLEAKKEENLADWYSQVITKSEMIEYH-DVSGCYILRPWAYAIWEAIKDFFDA 1073

Query: 286  KIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPM---- 339
             IK    E    P  + Q   + +  H   +   +  +      +       +KP     
Sbjct: 1074 GIKKLGVENCYFPMFVSQGALEKEKTHIADFAPEVSELLFYFFAVTYSLKGEIKPXMTVS 1133

Query: 340  --NCP-GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FC 395
               C       +   ++S+R+LP++L ++ +V R E        +R R F   + H  F 
Sbjct: 1134 IFPCLSVMYPAYAKWVQSHRDLPIKLNQWCNVVRWEFKHP-QPFLRTREFLWQEGHSAFA 1192

Query: 396  TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTI 455
            T E+   E L+I +L   +Y++     ++    T  EK  G D                 
Sbjct: 1193 TMEEAAEEVLQILDLYAQVYEELLAIPVVRGRKTEKEKFAGGD----------------- 1235

Query: 456  KNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS 515
                               Y    E     A GR  Q GT        S+          
Sbjct: 1236 -------------------YTTTVE-AFISASGRAIQGGTSHHLGQNFSKMFEIVFEDPK 1275

Query: 516  EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTT----------IT 561
                    ++  +G   R IG+M      N+ L L P    +Q ++              
Sbjct: 1276 TPGEKQFAYQNSWGLTTRTIGVMTMVHGDNMGLVLPPRVACVQVVIIPCGITNALSEEDK 1335

Query: 562  SSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERS-I 619
             + +    +    L + ++ +  D R+  +  +K     +K +PI +  G ++      +
Sbjct: 1336 EALIAKCNDYRRRLLNVNIRVRADLRDNYSPGWKFNHWELKGVPIRLEVGPRDMKSCQFV 1395

Query: 620  GIRRFGSTTTQKVSLLDAIPILT 642
             +R   +     V+  +A   L 
Sbjct: 1396 AVR-RDTGEKLTVAENEAETKLQ 1417


>gi|197286110|ref|YP_002151982.1| prolyl-tRNA synthetase [Proteus mirabilis HI4320]
 gi|227357229|ref|ZP_03841586.1| prolyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
 gi|226701319|sp|B4F249|SYP_PROMH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|194683597|emb|CAR44486.1| prolyl-tRNA synthetase [Proteus mirabilis HI4320]
 gi|227162492|gb|EEI47481.1| prolyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
          Length = 571

 Score =  142 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 50/257 (19%), Positives = 100/257 (38%), Gaps = 11/257 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +   L+       ++E   H+ + R   +  +A   SG+  W   G ++ + +   +R 
Sbjct: 3   TSHYLLSTLKETPADAEIVSHQLMLRAGMIRKLA---SGLYDWMPTGVRVLRKIEKIVRE 59

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      EI+ P V    LWQ+SG W+ Y   +       +     R F L P +    
Sbjct: 60  EMDNAGSLEISMPVVQPADLWQESGRWEQYGPELLRFTDRGE-----RPFVLGPTHEEVV 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNE 403
             +  + + SY++LP+ L +  + +R+E      G+MR R F   DA+ F  ++E +   
Sbjct: 115 TDIVRNEITSYKQLPLNLYQIQTKFRDEVRPRF-GVMRSREFIMKDAYSFHISQESLQET 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             +++    +I+   G +   V   T       S      A++    ++ +  +     I
Sbjct: 174 YDRMYQAYSNIFTRIGLDFRPVLADTGSIGGSASHEFQVLADSGEDDIVFSTASDYAANI 233

Query: 464 NTGVLLGEGAFYGPKFE 480
                +       P  E
Sbjct: 234 ELAEAVMPATPRSPATE 250



 Score = 86.8 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 59/168 (35%), Gaps = 13/168 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           I R  + G I Q+         A   N      H  ++    +G  I R +   IE    
Sbjct: 405 IKRGIEVGHIFQLGKKYSEALKATVQNEEG---HNQVVTMGCYGIGITRIVAAAIEQNHD 461

Query: 545 N----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                 P  ++P Q  +  +         E A+++   L++  + +  D R E       
Sbjct: 462 ARGIIWPDAIAPFQVAILPMNMHRSYRVKEVAEKLYADLRAQGIDVLFDDRKERPGVMFA 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  +  +P  I+ GD+      +  +   S     V++ D +  + ++
Sbjct: 522 DMELIGVPHTIVIGDRNLDNEQVEYKARRSDDKSLVNVNDVVAFIKEQ 569


>gi|189465317|ref|ZP_03014102.1| hypothetical protein BACINT_01665 [Bacteroides intestinalis DSM
           17393]
 gi|189437591|gb|EDV06576.1| hypothetical protein BACINT_01665 [Bacteroides intestinalis DSM
           17393]
          Length = 557

 Score =  142 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 41/207 (19%), Positives = 93/207 (44%), Gaps = 3/207 (1%)

Query: 1   MPSDIKLTFPDGSI-KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-S 58
           M   +++   + +I K FP+ ++  D+    + +   + V+  +N +   L+  V     
Sbjct: 1   MKHMLQICCKNNNISKEFPIGSSLLDIYYGFNLNFPYQVVSAKVNNRSEGLNFRVYNNKD 60

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           +E +   D   L     S   ++ +AV  ++P+ ++ +   +  G++ +    +P + ++
Sbjct: 61  VEFLDIRDSSGLRTYVRSLCFVLYKAVSELFPDGKLFVEHPVSKGYFCNLRIGRPITLED 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           ++ I+K+MQEII  +  + +      +A  +F  +    KV++LE+         Y  G+
Sbjct: 121 VSAIKKRMQEIIDENITYRRTECHTTEAVRIFNERGMTDKVKLLET-SGSIYTYYYSLGD 179

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAG 205
             D   G  + STG +  F  +    G
Sbjct: 180 TIDYYYGNLLPSTGFIWLFDIVKYYDG 206


>gi|91786735|ref|YP_547687.1| prolyl-tRNA synthetase [Polaromonas sp. JS666]
 gi|123356060|sp|Q12FA3|SYP_POLSJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|91695960|gb|ABE42789.1| prolyl-tRNA synthetase [Polaromonas sp. JS666]
          Length = 580

 Score =  142 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 54/326 (16%), Positives = 117/326 (35%), Gaps = 13/326 (3%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       ++E   H+ + R   +  +   G+G+  +   G ++ + + + +R 
Sbjct: 3   ASQFFISTLKEAPADAEIVSHQLMMRAGMIKKL---GAGIYSYMPMGLRVIRKVEAIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P +     WQ++G ++     +  +K      +  R F ++P +    
Sbjct: 60  EMNRAGAVEMTMPVIQPAEFWQETGRFEKMGPELLRIKD-----RHGRDFVVQPTSEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             V    +KSY++LP  L +  + +R+E      GLMR R FT  DA+ F   +      
Sbjct: 115 TDVMRQDIKSYKQLPKNLYQIQTKFRDERRPRF-GLMRGREFTMKDAYSFDRDQASAKAS 173

Query: 405 LKIH-NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            +I       I+  FG     V   +       S+     A      ++    +     +
Sbjct: 174 YQIMAQAYRRIFDRFGLTYRAVAADSGAIGGDLSEEFQVIAATGEDAIVYCPGSDYAANM 233

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLP--SRFNAFYVNSHSEKCHPV 521
                L          + ++K A      C  +     +P  +   +  + +        
Sbjct: 234 EKAEALPPQCDRKAASQAMVKTATPDKATCADVAQLLGIPLETTVKSLVLATDQTDEAGK 293

Query: 522 MIHRAVFGSIERFIGIMIENFKGNLP 547
           +I   ++  + R    M E   G +P
Sbjct: 294 IIKTQIWLLLLRGDHDMNEVKVGKVP 319



 Score = 77.5 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 28/167 (16%), Positives = 57/167 (34%), Gaps = 13/167 (7%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFK 543
           AI R  + G +  +        NA +++ + +   P  +    +G  I R     IE   
Sbjct: 412 AIERGIEVGHVFYLGTKYSQAMNATFLDENGK---PQFLEMGCYGIGITRLPAAAIEQNH 468

Query: 544 GN----LPLWLSPIQAIVTTITSS----AVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
                  P  ++P   ++  I+          A ++   L +  + +  D R E      
Sbjct: 469 DERGIIWPDAIAPFTVVICPISPDRFADVKAAADKLYGELLAAGVDVILDDRGERPGAMF 528

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +  +  +P  +  GD+   E  +  +      + KV    A+  L 
Sbjct: 529 ADWELIGVPHRVTIGDRGLKEGQLEYQHRRDAASSKVDAATALDFLK 575


>gi|269125121|ref|YP_003298491.1| prolyl-tRNA synthetase [Thermomonospora curvata DSM 43183]
 gi|268310079|gb|ACY96453.1| prolyl-tRNA synthetase [Thermomonospora curvata DSM 43183]
          Length = 477

 Score =  142 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 61/390 (15%), Positives = 125/390 (32%), Gaps = 61/390 (15%)

Query: 270 RKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHLW--QQSGHWDSYRANMFAVKCADDT 327
             G++I++ L + + R+IK+   +     +     +  +++ H + +   +  V  A   
Sbjct: 35  PYGYRIWELLQADLDRRIKEAGHDNACFPMFIPESYLRREAEHVEGFSPELAVVTVAGGK 94

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
             +     ++P +           + S+R+LP+ L ++ +V R E    +   +R   F 
Sbjct: 95  ELE-EPLVVRPTSETVIGEYMAKWIDSHRDLPLLLNQWANVVRWELRPRM--FLRTTEFL 151

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENI 447
             + H     E       +     +  Y                                
Sbjct: 152 WQEGHTAHIDEADAM---RETEWALDTYAAV----------------------------- 179

Query: 448 MKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRF 506
                +           T      GA      E +++D  GR  Q GT      N    F
Sbjct: 180 ---ARELAAMPVVPGEKTAGERFAGAVRTYTIEGMMRD--GRALQAGTSHYLGTNFAKAF 234

Query: 507 NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTI-- 560
           N  Y +      +    H   +G   R IG +I     +    LP  L+P Q ++  I  
Sbjct: 235 NIQYQDEEGALQYA---HTTSWGMSTRMIGGVIMTHGDDKGLVLPPRLAPYQVVIVPIGR 291

Query: 561 ---TSSAVEYAQEIANLLKSHHLSIETDFR--NETINYKIREHSIKKIPIIIICGDKEAS 615
                +    A+ +   +KS  + +  D      +  +K  +  ++ +PI I  G ++ +
Sbjct: 292 KEQGEATAAEARRLGAAIKSMGIRVHVDDNRPQLSPGFKFNDWEMRGVPIRIEIGPRDLA 351

Query: 616 ERSIGIRRF----GSTTTQKVSLLDAIPIL 641
           +    + R          + + L      L
Sbjct: 352 DGVGTLARRLPTAEGQGKETIPLARLPEEL 381


>gi|94986834|ref|YP_594767.1| prolyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00]
 gi|114152206|sp|Q1MRD0|SYP_LAWIP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|94731083|emb|CAJ54446.1| Prolyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00]
          Length = 575

 Score =  142 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 49/218 (22%), Positives = 86/218 (39%), Gaps = 12/218 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  +        ++E   H+ L R   +  +    SG+  W   G K     IS +R 
Sbjct: 3   WSQCYIPTLKEAPGDAELLSHKLLIRAGMIRKL---TSGIYTWLPLGLKTLNKAISIIRS 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     EEI  P V    LW++SG WD Y   +  +K   D     R + L P +    
Sbjct: 60  EMNRIGAEEILMPMVQPADLWKESGRWDQYGKELLRIKDRHD-----REYCLGPTHEEVV 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    ++SYR+LP+ + +  + +R+E      GLMR R F   DA+ F    +  +  
Sbjct: 115 THLLRGEVRSYRQLPINVYQIQTKFRDEIRPRF-GLMRAREFLMKDAYSFDQDNEGADIS 173

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWD 442
              H +  +    F    +  +        +G +   +
Sbjct: 174 Y--HTMFDAYKAIFTCMALDFRAVEADSGSIGGNFSHE 209



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/149 (20%), Positives = 53/149 (35%), Gaps = 11/149 (7%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGNL----PLWLSP 552
           +        NAF+++ + E+    ++    +G  + R I   IE          P  L+P
Sbjct: 413 LGTKYSKSMNAFFLDENGEEQ---LMVMGCYGIGVSRVIAACIEQNNDKYGIIFPPPLAP 469

Query: 553 IQAIVT---TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIIC 609
            + ++        S V  A EI     S  + +  D R E    K  +  +   PI +I 
Sbjct: 470 FEIMLINLDPRDESVVMKASEIYQFFLSEGIEVFLDDREERPGIKFNDADLLGFPIQVII 529

Query: 610 GDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           G K  +   I ++   +      SL    
Sbjct: 530 GAKSLANGIIEVKNRKTGEKSSFSLERFF 558


>gi|326925418|ref|XP_003208912.1| PREDICTED: probable prolyl-tRNA synthetase, mitochondrial-like
           [Meleagris gallopavo]
          Length = 470

 Score =  142 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 80/428 (18%), Positives = 147/428 (34%), Gaps = 34/428 (7%)

Query: 242 EKRDHRKLAREMDLFH----IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
           E +      R   L      I     G         +  + LI  +   +++   +++N 
Sbjct: 55  ESQAAELSCRSHRLMLQGGLIHPASPGCYHLLPPAVRSMEKLIRLIDGAMRNIGGQKVNM 114

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN-HGLKSY 355
           P +    LW+ SG W+     +F +       +  + + L P +      +   H   SY
Sbjct: 115 PSLSSAELWRASGRWEQMGPELFRL-----ADRHSKEYCLGPTHEEAVTELVAAHSNLSY 169

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISI 414
           R LP+RL +    +R+EP     GL+R R F   D + F T E+      ++      S+
Sbjct: 170 RHLPLRLYQVTRKFRDEPKPRF-GLLRSREFYMKDMYTFDTSEEAARHTYELVCRAYRSL 228

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           +K  G   + V+ +T       S      A +I +  L              V   + A 
Sbjct: 229 FKHLGLRCVQVRAATGTIGGTASHEFQLPA-DIGEDRLVLCPAGHFAANVEMVDEEQTA- 286

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
             P     L  + G +    T  +     S  NA +    ++     M      G   R 
Sbjct: 287 -CPTCGEKLTQSRGIEV-GHTFYLGTKYSSVHNAVFYTPENKLQLAEM-GCYGLGVT-RI 342

Query: 535 IGIMIE----NFKGNLPLWLSPIQAIVTTITSSAVE---------YAQEIANLLKSHHLS 581
           +   IE          P  ++P QA        + E            ++A  L      
Sbjct: 343 LAASIEVLSTEDSIRWPSLIAPFQACFIPPKKGSKEEEGAVLLEQLYDDVAEALPCLVGD 402

Query: 582 IETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSI-GIRRFGSTTTQKVSLLDAIP 639
           +  D R + TI  ++++ +    P ++I G +   +  +  +    + T   ++    I 
Sbjct: 403 VVLDDRTQMTIGKRLKDANKLGYPYVVIAGRRACEDPPVFEVWDQSTGTVLYLTKEGVIE 462

Query: 640 ILTKESLP 647
           +L+K  LP
Sbjct: 463 LLSKVQLP 470


>gi|262402773|ref|ZP_06079334.1| prolyl-tRNA synthetase [Vibrio sp. RC586]
 gi|262351555|gb|EEZ00688.1| prolyl-tRNA synthetase [Vibrio sp. RC586]
          Length = 571

 Score =  142 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 46/241 (19%), Positives = 95/241 (39%), Gaps = 11/241 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R+
Sbjct: 3   TSKYLLSTLKETPNDAEVVSHKLMLRAGMIRKLA---SGLYTWLPTGLRVLRKVETIVRQ 59

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           +I      E   P V    LW+++G  +     +        T +  R F L P      
Sbjct: 60  EIDNAGAIETLMPVVQPFELWEETGRSEKMGPELLRF-----TDRHERPFVLSPTAEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
            A+  + + SY++LP+ L +  + +R+E      G+MR R F+  DA+ F    + +   
Sbjct: 115 TALVRNEVNSYKQLPLNLYQIQTKFRDERRPRF-GVMRAREFSMMDAYSFDIDKDGLQKS 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +H      +   G +   V   +      GS      AE+    ++ + ++     I
Sbjct: 174 YDAMHAAYCKAFDRMGLDYRPVLADSGAIGGNGSQEFHVLAESGEDLIVFSTESDYAANI 233

Query: 464 N 464
            
Sbjct: 234 E 234



 Score = 88.3 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 63/166 (37%), Gaps = 13/166 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           + R  + G I Q+  N   + N   ++S+ +    V++    +G  + R +   IE    
Sbjct: 405 LKRGIEVGHIFQLGTNYSEKMNCGVLDSNGKN---VILEMGCYGIGVSRVVAAAIEQNHD 461

Query: 545 N----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +     P  L+P Q  +  +    +    E A+++   L +  + +  D R E       
Sbjct: 462 DYGIIWPDALAPFQVAIVPMNMHKSERVQEAAEKLYAELTAAGIEVLFDDRKERPGVMFS 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +  +  +P  II GD+   E     +       + V++   I  + 
Sbjct: 522 DMELIGVPHTIIIGDRSMDEGHFEYKNRRQGEKEAVAMESIIDFIQ 567


>gi|229544430|ref|ZP_04433488.1| prolyl-tRNA synthetase [Bacillus coagulans 36D1]
 gi|229324915|gb|EEN90592.1| prolyl-tRNA synthetase [Bacillus coagulans 36D1]
          Length = 569

 Score =  142 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 70/392 (17%), Positives = 135/392 (34%), Gaps = 39/392 (9%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        E+E + H+ L R   +  IA   SGV  +     K+   + + +R +
Sbjct: 4   SKLFIPTLRDVPAEAEVKSHQLLLRAGYIRQIA---SGVYTYLPLAKKVLHKIEAIIREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++     E+  P +    LWQ+SG W SY  ++  +K      +  R FAL P +     
Sbjct: 61  LEAIGSMELLMPSLQPAELWQESGRWYSYGPDLMRLKD-----RHERDFALGPTHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC----TKEQMF 401
           ++  + +KSY+ LP+ L +  + +R+E      GL+R R F   DA+ F     + ++ +
Sbjct: 116 SLIRNEVKSYKRLPLSLYQIQTKFRDEKRPRF-GLLRGREFIMKDAYSFHANKESLDETY 174

Query: 402 NECLKIHNLIISIYK--------DFGFEKIMVKLSTRPEKRVGSDALWDD------AENI 447
            +  + +  I S  K        D G               +G D +         A   
Sbjct: 175 KDMYRAYTNIFSRCKLDFRAVLADSGAIGGKDTQEFMVLSEIGEDTIAYSDSSDYAANIE 234

Query: 448 MKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFN 507
           M  V        +       +   G     +    LK    +  +   ++ D        
Sbjct: 235 MAEVKTVYTKPDEAEKPLEKIPTPGQRTIAQIADFLKADPEKCLKTLVLKADDEYVIVLV 294

Query: 508 AFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITS----- 562
               + +  K   ++    +  +    I  ++    G+L    +P Q  +    +     
Sbjct: 295 RGDHDVNEVKVKHLLGSETIEMADPEAIKSIMGADPGSLGPVGAPEQIRILADHAVRYVV 354

Query: 563 ----SAVEYAQEIANLLKSHHLSIET--DFRN 588
                A E      N        ++   D RN
Sbjct: 355 NGICGANENDFHYVNANPERDYRVDLYGDLRN 386



 Score = 67.1 bits (162), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 22/162 (13%), Positives = 58/162 (35%), Gaps = 10/162 (6%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I  +        +A +++ +  +   +++     G       +  ++      
Sbjct: 404 RGIEVGHIFKLGTKYSEAMHAAFLDENG-REQVMLMGCYGIGVSRTLTAVCEQHNDDKGL 462

Query: 548 LW---LSPIQAIVTTITSS---AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W   L+P    +  +          A+ +   L+    ++  D RNE    K  +  + 
Sbjct: 463 VWPVNLAPFDVHLVPVNMKDAQQSALAESLHAELEKQ-FTVLMDDRNERPGVKFADSDLI 521

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +P+ +  G K A+E  + ++   +    +V   D    ++ 
Sbjct: 522 GLPVRVTVGKK-AAEGIVEVKIRKTGEVLEVKKEDLAETISN 562


>gi|239928618|ref|ZP_04685571.1| prolyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
 gi|291436943|ref|ZP_06576333.1| prolyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
 gi|291339838|gb|EFE66794.1| prolyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
          Length = 567

 Score =  142 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 43/265 (16%), Positives = 96/265 (36%), Gaps = 14/265 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q           ++E   H+ L R   +   A    G+  W   G K+   +   +R +
Sbjct: 10  SQLMAKTLRDDPADAEVLSHKLLVRAGYVRRTAA---GIWTWLPLGKKVLANVERIVREE 66

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E+  P +L +  ++ +G WD Y   +F ++      +    + L P +     
Sbjct: 67  MDAIGAQEVLLPALLPREPYEATGRWDEYGPELFRLQD-----RKGGDYLLGPTHEEIFT 121

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +      SY++LPV L +  + +R+E      G++R R F   D++ F  +++      
Sbjct: 122 LLVKDQASSYKDLPVILYQIQTKFRDEARPR-AGILRGREFLMKDSYSFDLEDEGLARSY 180

Query: 406 KIH-NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIK---NSSQD 461
            +H      +++  G +  +   +        S+     AE       D       ++ +
Sbjct: 181 ALHRQAYQKVFERLGLDYRICAATAGAMGGSKSEEFLAPAEAGEDTFADCPNCDFAANTE 240

Query: 462 RINTGVLLGEGAFYGPKFEYILKDA 486
            I   +   + +      +    D 
Sbjct: 241 AIAYELKPVDASGAPAAEDIPTPDT 265



 Score = 85.6 bits (210), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 63/163 (38%), Gaps = 10/163 (6%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           + R  + G I Q+            +  + +     M    +   + R +  + E    +
Sbjct: 406 LDRAIEIGHIFQLGRKYTDALKLDVLGQNGKPVRVTMGSYGI--GVSRAVAALAEQTADD 463

Query: 546 LPL-WL---SPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHS 599
             L W    +P    V     +   E A +++  L +  + +  D R   +   K  +  
Sbjct: 464 KGLCWPQEVAPADVHVVAAGKALQTELALDVSEKLAAAGVRVLVDDRPGVSPGVKFTDSE 523

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +  +P I++ G + A+E  + ++   +   +++++ +AI  LT
Sbjct: 524 LIGVPRILVAGRR-AAEGVVELKDRRTGEREELTVEEAIARLT 565


>gi|223943839|gb|ACN26003.1| unknown [Zea mays]
          Length = 419

 Score =  142 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 56/346 (16%), Positives = 124/346 (35%), Gaps = 58/346 (16%)

Query: 294 INTPQVLDQHL-WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           +  PQ +      +++ H + +   +  V        + +   ++P +      +F   +
Sbjct: 1   MYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEK-LVVRPTSETIVNHMFTKWI 59

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLI 411
           +SYR+LP+ + ++ +V R E        +R   F   + H    T E+   E +++ ++ 
Sbjct: 60  QSYRDLPLMINQWANVTRWEMR--TKPFIRTLEFLWQEGHTAHATLEEAEKEAMQMIDVY 117

Query: 412 ISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
                +     ++    +R E   G                                   
Sbjct: 118 TKFAFEHAAIPVIPGRKSRVETFAG----------------------------------- 142

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
            A      E ++ D   +  Q GT   +  N    F   +++ + +  H   + +  +  
Sbjct: 143 -ANRTYTIEAMMGD--KKALQAGTSHNLGQNFSRAFGTQFMDENGQIEH---VWQTSWAI 196

Query: 531 IERFIGIMIENFKGN----LPLWLSPIQAIVTTITSS------AVEYAQEIANLLKSHHL 580
             RF+G +I     +    LP  ++PIQ I+  I          VE    +  +LK   +
Sbjct: 197 STRFVGGIIMTHGDDAGLMLPPRIAPIQVIIVPIWKKGDEKAVVVEAVDSVQKILKEAGI 256

Query: 581 SIETDFRN-ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
            ++ D     T  +K   + +K +P+ I  G ++ + +S+ + R  
Sbjct: 257 RVKVDDSELRTPGWKFNHYEMKGVPVRIEIGPRDVTNKSVVVSRRD 302


>gi|119717421|ref|YP_924386.1| prolyl-tRNA synthetase [Nocardioides sp. JS614]
 gi|152112937|sp|A1SLL4|SYP_NOCSJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|119538082|gb|ABL82699.1| prolyl-tRNA synthetase [Nocardioides sp. JS614]
          Length = 589

 Score =  142 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 40/216 (18%), Positives = 86/216 (39%), Gaps = 11/216 (5%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
           +        ++E   HR L R   +        G+  W   G ++ + + + +R ++   
Sbjct: 10  VRTLREDPADAEVPSHRLLVRAGYIR---RAAPGIYTWLPLGLRVLRKIENVIREEMDAI 66

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
             +E+  P +L +  ++ +  W  Y   +F ++      +    + L P +      V  
Sbjct: 67  GAQEMLFPALLPREPYEATNRWTEYGDGIFRLQD-----RKGADYLLGPTHEEMFTLVVK 121

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
               SY++LP+ + +  + YR+E      GL+R R F   D++ F   +   +   + H 
Sbjct: 122 DLYSSYKDLPLSIYQIQTKYRDEARPR-AGLLRGREFVMKDSYSFDVDDAGLDVSYQKHR 180

Query: 410 -LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
              + I+   GFE ++V+  +       S+     A
Sbjct: 181 DAYVRIFDRLGFEYVIVEAMSGAMGGSKSEEFLAKA 216



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 25/161 (15%), Positives = 56/161 (34%), Gaps = 11/161 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I Q+        +   ++   +     M    +     R +  + E     L 
Sbjct: 426 RGIEMGHIFQLGRKYADALDLKVLDEQGKLVTVTMGSYGI--GPSRAVAAIAEGTHDELG 483

Query: 548 L-WL---SPIQAIVTTITSSAVEYA--QEIANLLKSHHLSIETDFRNE-TINYKIREHSI 600
           L W    +P    +         +A  + IA+ L    + +  D R + +   K ++  +
Sbjct: 484 LAWPREVAPADVHIVATGKDEHVFAAAERIAHELDKQGVEVLYDDRPKVSPGVKFKDAEL 543

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
             +P I++ G K  +  +I ++   +   Q V     +  +
Sbjct: 544 IGVPTIVVVG-KGLAAGTIEVKDRRTGQRQDVPADHLVDRV 583


>gi|254421628|ref|ZP_05035346.1| prolyl-tRNA synthetase [Synechococcus sp. PCC 7335]
 gi|196189117|gb|EDX84081.1| prolyl-tRNA synthetase [Synechococcus sp. PCC 7335]
          Length = 597

 Score =  142 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 55/247 (22%), Positives = 96/247 (38%), Gaps = 8/247 (3%)

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK 288
                      E+E   H+ L R   +  IA   SG+  +     ++   + + +R ++ 
Sbjct: 1   MLFVTLREDPAEAEIPSHKLLLRAGYMRRIA---SGLYAYLPLLQRVLDKVSAIVREEMN 57

Query: 289 D-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
               +E   PQ+    LW++SG WD+Y      +    D  +  +  AL P +     A+
Sbjct: 58  ATGAQECLLPQLQPASLWKESGRWDTYTKAEGIMFSLGD--RRDQELALGPTHEEVITAI 115

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLK 406
               ++SY++LP+ L +  + +R+E      GLMR R F   D + F T  E +     +
Sbjct: 116 ARDMIRSYKQLPLHLYQIQTKFRDEIRPRF-GLMRGREFIMKDGYSFHTDAESLKATYDQ 174

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           ++    +I +  G     V+  +      GS      AE     VL T        +   
Sbjct: 175 MYRTYSNILRRTGLAFRAVEADSGAIGGSGSTEFMVLAEAGEDEVLYTEDGHYSANVEKA 234

Query: 467 VLLGEGA 473
           V L   A
Sbjct: 235 VSLPPDA 241



 Score = 84.8 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 27/161 (16%), Positives = 62/161 (38%), Gaps = 9/161 (5%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I Q+         A Y +    K  P+ +     G        + +++  N  
Sbjct: 430 RGIEIGHIFQLGHKYSEALGATYTSEQG-KEVPLEMGCYGVGVSRLAQAAVEQSYDKNGI 488

Query: 548 LWL---SPIQAIVTT---ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W    +P  AIV          +  A+++ + L S  +    D R E    K ++  + 
Sbjct: 489 IWPVAIAPYHAIVVVPNIGDDDQMAAAKQLYDDLNSAGVETLLDDRKERAGVKFKDAELV 548

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            IP  ++ G +   +  + + +  +   ++++L +A+  + 
Sbjct: 549 GIPFRVVTG-RSLKQGKVEVAKRANGEVEEIALDEAVHTIK 588


>gi|26554256|ref|NP_758190.1| prolyl-tRNA synthetase [Mycoplasma penetrans HF-2]
 gi|81846191|sp|Q8EUW7|SYP_MYCPE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|26454265|dbj|BAC44594.1| prolyl aminoacyl-tRNA synthetase [Mycoplasma penetrans HF-2]
          Length = 470

 Score =  142 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 78/421 (18%), Positives = 158/421 (37%), Gaps = 59/421 (14%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
             EE+  + +  +    +L         ++F    G+ I++ +     + +   +  E+ 
Sbjct: 6   KQEENFSKWYTSIIENANLVDYGLVKGTIMF-KPYGFAIWKRIQEEFNKILVSLNTAEVC 64

Query: 296 TPQVLD-QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
            P ++      ++  H + +   +F V    +   +     ++P +       F   +KS
Sbjct: 65  FPMLIPYSEFMKEKEHVEGFNPELFKVSHLGEKKLED-ELVIRPTSEISFCNYFKKNIKS 123

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH-VFCTKEQMFNECLKIHNLIIS 413
           Y +LP  L ++GSV+R E   +    +R   F   + H VF  K++ F+  + + N    
Sbjct: 124 YNDLPCILNQWGSVFRVEK--NTRPFLRTSEFLWQEQHAVFADKKEAFDFSITMVNEYKK 181

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
              D+    +++   T  E+  G+D  +                                
Sbjct: 182 FVNDYLSIAVLMGEKTENERFAGADNTF-------------------------------- 209

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
                 E ++ D  G+  Q  T      N    ++  Y   ++      ++ +   G   
Sbjct: 210 ----TIEALMPD--GQVLQSATSHYLGTNFAKSYDLKYQTKNNNYD---LMFQTSAGLST 260

Query: 533 RFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKS-HHLSIETDFR 587
           R IG +I    +N    LP  ++PIQ  + T      + + E+  + K+      +T F 
Sbjct: 261 RIIGAIIMSHSDNNGLVLPFKIAPIQFAIVTSNEVNKD-SDELKAIYKNLFGYKYQTYFV 319

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD----AIPILTK 643
            +++  +++E+ IK IP  +I G KE    +I I R  +   Q +S  +     I  L K
Sbjct: 320 EKSLGLQLQENEIKGIPFQLILGKKEIENNTITIYRRDTREKQNISFKEFNQNFIENLIK 379

Query: 644 E 644
           E
Sbjct: 380 E 380


>gi|323498007|ref|ZP_08103016.1| prolyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
 gi|323317052|gb|EGA70054.1| prolyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
          Length = 571

 Score =  142 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 46/248 (18%), Positives = 93/248 (37%), Gaps = 11/248 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +   L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R+
Sbjct: 3   TSNYLLSTLKETPNDAEVVSHQLMLRAGMIRKLA---SGLYTWLPTGLRVLRKVENIVRQ 59

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           +I      E   P V    LW+++G  +     +        T +  R F L P      
Sbjct: 60  EIDNAGAVETLMPVVQPFELWEETGRSEKMGPELLRF-----TDRHTRPFVLSPTAEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
            ++  + + SY++LP+ L +  + +R+E      G+MR R F   DA+ F    + +   
Sbjct: 115 TSLVRNEVSSYKQLPLNLYQIQTKFRDERRPRF-GVMRAREFCMMDAYSFDIDKDGLQKS 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +H+     +   G E   V   +      GS      AE+    +  + ++     I
Sbjct: 174 YDAMHDAYCKAFDRMGLEYRPVLADSGAIGGSGSQEFHVLAESGEDLIAFSTESDYAANI 233

Query: 464 NTGVLLGE 471
                   
Sbjct: 234 EKAEAAAP 241



 Score = 86.4 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 60/168 (35%), Gaps = 13/168 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           + R  + G I Q+        N   +    +    V++    +G  + R +   IE    
Sbjct: 405 LKRGIEVGHIFQLGKAYSEAMNCGVLGPDGKN---VILEMGCYGIGVSRVVASAIEQNHD 461

Query: 545 N----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                 P  L+P Q  +  +    +    E A+++   L +  + +  D R E       
Sbjct: 462 KYGIIWPDALAPFQVAIVPMNMHKSEEVKEAAEKLYAELTAMGIEVLFDDRKERPGVMFS 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  +  IP  I+ GD+   E +   +   S     V++ D +  +  +
Sbjct: 522 DMELIGIPHTIVIGDRSMKEGNFEYKNRRSGEKTAVAMTDIVEHVKAQ 569


>gi|260775255|ref|ZP_05884152.1| prolyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
 gi|260608436|gb|EEX34601.1| prolyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
          Length = 571

 Score =  142 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 47/241 (19%), Positives = 93/241 (38%), Gaps = 11/241 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +   L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R+
Sbjct: 3   TSNYLLSTLKETPNDAEVVSHQLMLRAGMIRKLA---SGLYTWLPTGLRVLRKVENIVRQ 59

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           +I      E   P V    LW+++G  +     +        T +  R F L P      
Sbjct: 60  EIDNAGAVETLMPVVQPFELWEETGRSEKMGPELLRF-----TDRHTRPFVLSPTAEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
            ++  + + SY++LP+ L +  + +R+E      G+MR R F   DA+ F    E +   
Sbjct: 115 TSLVRNEVSSYKQLPLNLYQIQTKFRDERRPRF-GVMRAREFCMMDAYSFDIDKEGLQKS 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +H+     +   G E   V   +      GS      AE+    +  + ++     I
Sbjct: 174 YDAMHDAYCKAFDRMGLEYRPVLADSGAIGGSGSQEFHVLAESGEDLIAFSTESDYAANI 233

Query: 464 N 464
            
Sbjct: 234 E 234



 Score = 87.9 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 61/169 (36%), Gaps = 13/169 (7%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFK 543
           A+ R  + G I Q+        N   +    +    V++    +G  + R +   IE   
Sbjct: 404 ALKRGIEVGHIFQLGNVYSQAMNCGVLGPDGKN---VILEMGCYGIGVSRVVASAIEQNH 460

Query: 544 GN----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
                  P  L+P Q  +  +    +    E A+++   L +  + +  D R E      
Sbjct: 461 DKYGIIWPDALAPFQVAIVPMNMHKSEEVKEAAEKLYAELTAMGIEVLFDDRKERPGVMF 520

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            +  +  IP  I+ GD+   E +   +   +     V++ D +  +  +
Sbjct: 521 SDMELIGIPHTIVIGDRSMKEGNFEYKNRRTGDKTPVAMADIVEHIKAQ 569


>gi|294668560|ref|ZP_06733657.1| proline--tRNA ligase [Neisseria elongata subsp. glycolytica ATCC
           29315]
 gi|291309523|gb|EFE50766.1| proline--tRNA ligase [Neisseria elongata subsp. glycolytica ATCC
           29315]
          Length = 569

 Score =  142 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 47/223 (21%), Positives = 84/223 (37%), Gaps = 11/223 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       E+    H+ + R      I  + SG+  W   G ++ + + + +R 
Sbjct: 3   ASQFFISTLKEAPAEAALASHKLMIRAG---LIKANASGLYTWMPMGLRVLRKVENVVRE 59

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E+  P V    LWQ+SG W+ Y   +  +K   D     R F + P      
Sbjct: 60  EMARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHD-----RDFCMGPTCEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP       + +R+E      G+MR R F   DA+ F          
Sbjct: 115 ADIVRKEINSYKQLPKNFYHIQTKFRDEVRPRF-GVMRAREFVMKDAYSFHADYASLQTT 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
              +++    I+     E   V   T      GS      AE+
Sbjct: 174 YDAMYDAYCRIFTRLDLEFRPVAADTGSIGGTGSHEFQVLAES 216



 Score = 82.5 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 60/170 (35%), Gaps = 12/170 (7%)

Query: 484 KDAIGRDWQCGTIQVDFNLPSR---FNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMI 539
            D  GR      I+V      R     A  V+         ++    +G  I R +   I
Sbjct: 395 PDGQGRLKLTRGIEVGHVFQLRDKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAI 454

Query: 540 E-NFKGNLPLW---LSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           E N      +W   ++P + ++  +    + +  E A +I   L +    +  D R+E  
Sbjct: 455 EQNNDEKGIIWTKAMAPFEVVIVPMNYKKSDAVREAADKIYAELLAAGADVLLDDRDERA 514

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
              + +  +  IP  I+ GD+   E ++      +   Q V   +    +
Sbjct: 515 GVLLNDSELLGIPHRIVIGDRALKEGNVEYAERRNNEAQTVPTGEIAAKV 564


>gi|161344762|ref|NP_441328.2| prolyl-tRNA synthetase [Synechocystis sp. PCC 6803]
 gi|114152887|sp|P73942|SYP_SYNY3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
          Length = 603

 Score =  142 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 54/249 (21%), Positives = 96/249 (38%), Gaps = 8/249 (3%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q           ++E   H+ L R   +  +   GSG+  +    W++ + +   ++ +
Sbjct: 4   SQMLFVTLRDDPADAEIPSHKLLVRAGFIRRL---GSGLYAYLPLIWRVLEKVKRIVQEE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E   PQ+    LW+ SG WD+Y  +   +    D  +  R   L P +     
Sbjct: 61  MNRTGAQECLLPQLQPSELWKMSGRWDTYTESEGIMFALRD--RLERELGLGPTHEEVIT 118

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           A+    ++SYR+LPV L +  + +R+E      GLMR R F   DA+ F + E       
Sbjct: 119 AIAKEMIRSYRQLPVNLYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSFHSDEASLKATY 177

Query: 406 -KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
             +     +I+   G +   V   +      GS      A+     +L T        + 
Sbjct: 178 GAMDQAYRNIFSRCGLDFRPVDADSGAIGGSGSQEFMVLADAGEDEILYTEDGLYSANVE 237

Query: 465 TGVLLGEGA 473
             V L   A
Sbjct: 238 KAVSLAPDA 246



 Score = 86.0 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 69/175 (39%), Gaps = 14/175 (8%)

Query: 480 EYILKDAIG-----RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           +  + D  G     R  + G I Q+         A + N   E+  P+++     G    
Sbjct: 421 DRPVHDPTGELKTARGIEVGHIFQLGTKYSQAMGATFTNEQGEEK-PLVMGCYGIGVSRL 479

Query: 534 FIGIMIENFKGNLPLWL---SPIQAIVTT---ITSSAVEYAQEIANLLKSHHLSIETDFR 587
               + +++  +  +W    +P + ++          ++ A++I    ++  + +  D R
Sbjct: 480 AQAAVEQSYDKDGIIWPTAIAPYEVVIVVPNVGDEEQMQVAEQIYTEFQAAEVDVLLDDR 539

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           NE    K ++  +  IP  ++ G K   +  + + +    + Q +++   +P LT
Sbjct: 540 NERAGVKFKDSELIGIPYRVVTG-KSLKQGQLEVVKRADKSVQNLAIAAVVPTLT 593


>gi|1653092|dbj|BAA18008.1| proline-tRNA ligase [Synechocystis sp. PCC 6803]
          Length = 617

 Score =  142 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 54/249 (21%), Positives = 96/249 (38%), Gaps = 8/249 (3%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q           ++E   H+ L R   +  +   GSG+  +    W++ + +   ++ +
Sbjct: 18  SQMLFVTLRDDPADAEIPSHKLLVRAGFIRRL---GSGLYAYLPLIWRVLEKVKRIVQEE 74

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E   PQ+    LW+ SG WD+Y  +   +    D  +  R   L P +     
Sbjct: 75  MNRTGAQECLLPQLQPSELWKMSGRWDTYTESEGIMFALRD--RLERELGLGPTHEEVIT 132

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           A+    ++SYR+LPV L +  + +R+E      GLMR R F   DA+ F + E       
Sbjct: 133 AIAKEMIRSYRQLPVNLYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSFHSDEASLKATY 191

Query: 406 -KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
             +     +I+   G +   V   +      GS      A+     +L T        + 
Sbjct: 192 GAMDQAYRNIFSRCGLDFRPVDADSGAIGGSGSQEFMVLADAGEDEILYTEDGLYSANVE 251

Query: 465 TGVLLGEGA 473
             V L   A
Sbjct: 252 KAVSLAPDA 260



 Score = 86.0 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 69/175 (39%), Gaps = 14/175 (8%)

Query: 480 EYILKDAIG-----RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           +  + D  G     R  + G I Q+         A + N   E+  P+++     G    
Sbjct: 435 DRPVHDPTGELKTARGIEVGHIFQLGTKYSQAMGATFTNEQGEEK-PLVMGCYGIGVSRL 493

Query: 534 FIGIMIENFKGNLPLWL---SPIQAIVTT---ITSSAVEYAQEIANLLKSHHLSIETDFR 587
               + +++  +  +W    +P + ++          ++ A++I    ++  + +  D R
Sbjct: 494 AQAAVEQSYDKDGIIWPTAIAPYEVVIVVPNVGDEEQMQVAEQIYTEFQAAEVDVLLDDR 553

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           NE    K ++  +  IP  ++ G K   +  + + +    + Q +++   +P LT
Sbjct: 554 NERAGVKFKDSELIGIPYRVVTG-KSLKQGQLEVVKRADKSVQNLAIAAVVPTLT 607


>gi|329960342|ref|ZP_08298767.1| phosphoribulokinase/uridine kinase family protein [Bacteroides
           fluxus YIT 12057]
 gi|328532780|gb|EGF59562.1| phosphoribulokinase/uridine kinase family protein [Bacteroides
           fluxus YIT 12057]
          Length = 557

 Score =  142 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 49/207 (23%), Positives = 94/207 (45%), Gaps = 3/207 (1%)

Query: 1   MPSDIKLTFPDGSI-KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-S 58
           M   +++   + +I K FP+ ++  D+    + +   + V+  +N +   L+  V     
Sbjct: 1   MKHMLQICCKNNNISKEFPIGSSLLDIYYGFNLNFPYQVVSAKVNNRSEGLNFRVYNNKD 60

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           IE +   D   +     S   I+ +AV  ++PE ++ +   +  G++ +    +P   ++
Sbjct: 61  IEFLDVRDSSGMRTYVRSLCFILYKAVSELFPEGKLFVEHPVSKGYFCNLRIGRPIELED 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           +A I+K+MQEIIA D PF +      +A  +F  +    KV++LE+         Y  G+
Sbjct: 121 VAAIKKRMQEIIAGDIPFHRVECHTTEAVRIFSERGMNDKVKLLET-SGSLYTYYYTLGD 179

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAG 205
             D   G  + S G VK F  +    G
Sbjct: 180 TVDYYYGNLLPSAGFVKLFDIVKYYDG 206


>gi|193661987|ref|XP_001946406.1| PREDICTED: probable prolyl-tRNA synthetase, mitochondrial-like
           [Acyrthosiphon pisum]
          Length = 433

 Score =  142 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 70/410 (17%), Positives = 144/410 (35%), Gaps = 29/410 (7%)

Query: 217 LSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIF 276
           ++ +      T+       +  +E      + +    +L  I +  +G+        +  
Sbjct: 1   MNSLKNMFRPTKPISKNVSFKPDELISNSQKLML---ELGIIRQSANGLYHLLPLAQRSL 57

Query: 277 QTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFA 335
             LI  + + + D   ++I+ P ++  +LW+++G  +    +++ V       +  + F 
Sbjct: 58  DKLIFIINKNMMDIGAQKISMPVLIHSNLWKKTGRLNKNIEDLYLVND-----RKSKEFL 112

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC 395
           L P +      +F+   K+Y++LP+ L + G+ +R+E    L G++R + F   D + F 
Sbjct: 113 LSPTHEEVVTDLFSSDPKTYKQLPLMLYQVGTKFRDEIRPKL-GIIRSKEFLMKDLYSFD 171

Query: 396 TKEQMFNECL-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDT 454
             +        K+      I+K  G + I V+ ++       S      AE     +L  
Sbjct: 172 RDQTSATFTYNKVCQAYEKIFKHIGVKFIRVEGASGMMGGNQSHEFHYPAEVGDDTLLQC 231

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH 514
            K      +N  +         PK      +         T  +     S  +A Y ++ 
Sbjct: 232 KKCGF--GMNKEMSPESVQ--CPKCSSTDIEFTKAIEVGHTFHLGTFYSSALSATYSDTD 287

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIE----NFKGNLPLWLSPIQAIVTTITSSAVE---- 566
                P M    +   + R IG  +E          P  +SP    +      ++E    
Sbjct: 288 GTMKPPYMCSYGL--GVSRIIGASVECLSTQDVIQWPRSISPFTICIIPAKEGSIEENAS 345

Query: 567 --YAQEIANLLKS-HHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDK 612
                 + N         I  D R   TI  ++ E      P +++ G K
Sbjct: 346 LNNVHSLYNHFTEIFGDDIIVDDRTHMTIGKRLIEAKKLGFPFVVVMGKK 395


>gi|326428221|gb|EGD73791.1| bifunctional aminoacyl-tRNA synthetase [Salpingoeca sp. ATCC 50818]
          Length = 1489

 Score =  142 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 74/441 (16%), Positives = 144/441 (32%), Gaps = 62/441 (14%)

Query: 225  WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR 284
                Q         EE     + ++  + +L     D SG        + +++ +  +  
Sbjct: 982  PAKGQTRLGIEAKKEEDFPEWYSQVLTKSELIEY-YDVSGCFVLLPWAYFMWEQIQEFFN 1040

Query: 285  RKIKD-DYEEINTPQ-VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
              ++         P  V    L ++  H   +   +  V  A D+  +    A++P +  
Sbjct: 1041 GHLRRLGVSNCYFPMFVTMDRLQKEKDHIADFAPEVAWVTHAGDSPMEK-PIAIRPTSET 1099

Query: 343  GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMF 401
                 +   ++S+R+LP+R+ ++ +V R E   +    +R R F   + H  +  +    
Sbjct: 1100 IMYPYYAKKVQSHRDLPIRMNQWSNVVRWEFKQAT-PFLRTREFLWQEGHTAYANQADAE 1158

Query: 402  NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
             E  +I +L  +IY+D     ++    T  EK  G                         
Sbjct: 1159 AEVYEILDLYRAIYEDLLAIPVIPGRKTEKEKFAGG------------------------ 1194

Query: 462  RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
                         Y    E  +    GR  Q  T        S+          +     
Sbjct: 1195 ------------VYTTTVEGFIP-QTGRGIQGATSHHLGQNFSKMFEIKYQDPQDASKDC 1241

Query: 522  MIHRAVFGSIERFIGIMIENFKGN-----LPLWLSPIQAIVTTIT----------SSAVE 566
              ++  +G   R +G+MI     N     LP  ++ IQ  V                 + 
Sbjct: 1242 FAYQNSWGLTTRTLGVMIMVHSDNKVGLVLPPRVACIQVAVIPTGLSAKLGDDKRDKLLA 1301

Query: 567  YAQEIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSI--GIRR 623
             A+ I + LK   +    D   + +  +K   + +K +P+ I  G ++     +   +R 
Sbjct: 1302 EARAIEDELKRAGIRAHADLDLHVSPPWKYNHYELKGVPLRIEVGPRDMESNQVVAVVRC 1361

Query: 624  FGST-TTQKVSLLDAIPILTK 643
             G   T  + +L  AIP   K
Sbjct: 1362 TGDKLTLARDTLATAIPATLK 1382


>gi|322420273|ref|YP_004199496.1| prolyl-tRNA synthetase [Geobacter sp. M18]
 gi|320126660|gb|ADW14220.1| prolyl-tRNA synthetase [Geobacter sp. M18]
          Length = 573

 Score =  142 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 46/220 (20%), Positives = 85/220 (38%), Gaps = 11/220 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  +        ++E   H+ + R   +  +A    G+  +   G +  + +   +R +
Sbjct: 4   SQYFIPTVKETPSDAEVISHKLMLRAGMIRKLAA---GIYNYLPLGLRSIRKVEQIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P V    LW++SG WD Y   +   K   D       F + P +     
Sbjct: 61  MNRAGAIELLMPAVQPAELWKESGRWDFYGKELLRFKDRKDA-----EFCMGPTHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    ++SYR++P+ L +    +R+E      GLMR R F   DA+ F   E   +   
Sbjct: 116 DLIRKEIRSYRQMPINLYQIQGKFRDEIRPRF-GLMRGREFIMKDAYSFDVNEAGADVSY 174

Query: 406 -KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
            K++     I++  G +   V+  T       S      A
Sbjct: 175 EKMYKAYRRIFERCGLKFRAVEADTGTIGGNYSHEFMVLA 214



 Score = 76.4 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/155 (16%), Positives = 63/155 (40%), Gaps = 12/155 (7%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGN 545
           R  + G +  +        NA +++++ ++    +I    +G  I R +   IE N   N
Sbjct: 405 RGIEVGHVFKLGTKYSKALNASFLDANGKEQ---IIFMGCYGIGIGRTVAACIEQNHDEN 461

Query: 546 LPLWLSPIQAIVTTIT------SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
             ++  PI      ++            +++I + L    + +  D R+E   +K ++  
Sbjct: 462 GIIFPIPIAPFHCIVSALSAKEDEVKAASEQIYSELLEAGVEVLLDDRDERPGFKFKDAD 521

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           +  IP+ ++ G K   +  + ++   S   + + +
Sbjct: 522 LIGIPLRLVVGAKNLVDGKVELKERRSGEVEILPI 556


>gi|318056620|ref|ZP_07975343.1| prolyl-tRNA synthetase [Streptomyces sp. SA3_actG]
 gi|318080757|ref|ZP_07988089.1| prolyl-tRNA synthetase [Streptomyces sp. SA3_actF]
          Length = 563

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 59/325 (18%), Positives = 118/325 (36%), Gaps = 21/325 (6%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++E   H+ L R   +   A    G+  W   G K+   +   +R +
Sbjct: 8   SRLMVKTLRDDPADAETLSHKLLVRAGYVRRTAA---GIWSWLPLGKKVLDNISQIVREE 64

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E+  P +L +  ++ SG W+ Y   +F +K      +    + L P +     
Sbjct: 65  MDAIGAQEVLLPALLPREPYEASGRWEEYGDLLFRLKD-----RKGADYLLGPTHEEIFT 119

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            V      SY++LPV L +  + YR+E      G++R R F   D++ F T E+   E  
Sbjct: 120 QVVKDQCTSYKDLPVMLYQVQTKYRDEARPR-SGVLRGREFVMKDSYSFDTTEEGLAESY 178

Query: 406 KIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA---ENIMKGVLDTIKNSSQD 461
            +H      I+   G +  +V   +       S+     A   E+      +    ++ +
Sbjct: 179 ALHREAYRKIFARLGLDYRIVSAVSGAMGGSASEEFLAPAAAGEDTFADCPNCGFAANTE 238

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
            +       +G+ +GP  E    D      +     +     +      V    E     
Sbjct: 239 AVTFKGAEVDGSAHGPVEELDTPDT--PTIESLAEHLGVPASATLKNLLVKVDGE----- 291

Query: 522 MIHRAVFGSIERFIGIMIENFKGNL 546
           ++   V G  E  +G + E+    +
Sbjct: 292 IVAVGVPGDREVDLGKLGEHLAPAV 316



 Score = 87.1 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 28/164 (17%), Positives = 61/164 (37%), Gaps = 10/164 (6%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
            + R  + G I Q+       F    +  + +     M    +   + R +  + E    
Sbjct: 402 HLDRAIEIGHIFQLGRKYADTFQLDVLGQNGKPVRVTMGSYGI--GVSRAVAALAEQTAD 459

Query: 545 NLPL-WLSPIQA----IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREH 598
           +  L W + +      +V        E A EIA+ L +    +  D R   +   K  + 
Sbjct: 460 DKGLCWPAEVSPADVHVVAAGKVLQTELALEIADKLAAAGARVLVDDRAGVSPGVKFTDA 519

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +  +P  +I G + A    + ++   +   +++S+ +A+  LT
Sbjct: 520 ELIGVPKTVIAGRRSAE-GIVELKDRRTGEREELSVEEAVARLT 562


>gi|298368808|ref|ZP_06980126.1| proline--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
 gi|298282811|gb|EFI24298.1| proline--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
          Length = 569

 Score =  141 bits (356), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 47/223 (21%), Positives = 84/223 (37%), Gaps = 11/223 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       E+    H+ + R      I  + SG+  W   G ++ + + + +R 
Sbjct: 3   ASQFFISTLKEAPAEAALASHKLMIRAG---LIKANASGLYTWMPMGLRVLRKVENVVRE 59

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E+  P V    LWQ+SG W+ Y   +  +K   D     R F + P      
Sbjct: 60  EMARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHD-----RDFCMGPTCEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP       + +R+E      G+MR R F   DA+ F          
Sbjct: 115 ADIVRKEINSYKQLPKNFYHIQTKFRDEVRPRF-GVMRAREFVMKDAYSFHADYASLQTT 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
              +++    I+   G E   V   T       S      AE+
Sbjct: 174 YDAMYDAYCRIFTRLGLEFRPVAADTGSIGGTDSHEFQVLAES 216



 Score = 83.7 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 59/170 (34%), Gaps = 12/170 (7%)

Query: 484 KDAIGRDWQCGTIQVDFNLPSR---FNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMI 539
            D  GR      I+V      R     A  V+         ++    +G  I R +   I
Sbjct: 395 PDGQGRLKLARGIEVGHVFQLRDKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAI 454

Query: 540 E-NFKGNLPLW---LSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           E N      +W   ++P + ++  +    + +  E A +I   L +    +  D R+E  
Sbjct: 455 EQNNDEKGIIWTKAMAPFEVVIVPMNYKKSDAVREAADKIYTELLAAGADVLLDDRDERA 514

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
              + +  +  IP  I+ GD+   E ++          Q V   +    +
Sbjct: 515 GVLLNDSELLGIPHRIVIGDRALKEGNVEYAERRDNEAQTVPTDEIAAKV 564


>gi|325204335|gb|ADY99788.1| prolyl-tRNA synthetase [Neisseria meningitidis M01-240355]
          Length = 570

 Score =  141 bits (356), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 47/223 (21%), Positives = 84/223 (37%), Gaps = 11/223 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       E+    H+ + R      I  + SG+  W   G ++ + + + +R 
Sbjct: 3   ASQFFISTLKEAPAEAALASHKLMIRAG---LIKANASGLYTWMPMGLRVLRKVENVVRE 59

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E+  P V    LWQ+SG W+ Y   +  +K   D     R F + P      
Sbjct: 60  EMARAGSVELLMPVVQPAELWQESGRWEFYXKELLRLKDRHD-----RDFCMGPTCEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LP       + +R+E      G+MR R F   DA+ F          
Sbjct: 115 ADIVRKEINSYKQLPKNFYHIQTKFRDEVRPRF-GVMRAREFVMKDAYSFHADYASLQTT 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
              +++    I+   G     V   T      GS      AE+
Sbjct: 174 YDAMYDAYCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAES 216



 Score = 85.2 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 64/171 (37%), Gaps = 12/171 (7%)

Query: 484 KDAIGRDWQCGTIQVDFNLPSR---FNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMI 539
            D  GR      I+V      R     A  V+         ++    +G  I R +   I
Sbjct: 395 PDGQGRLKLARGIEVGHVFQLRDKYTKAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAI 454

Query: 540 E-NFKGNLPLW---LSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           E N      +W   ++P + ++  +    + +  E A +I   L +    +  D R+E  
Sbjct: 455 EQNNDEKGIIWTKAMAPFEVVIVPMNYKKSDTVREAADKIYAELLAAGADVLLDDRDERA 514

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
              + +  +  IP  I+ GD+   E ++      +   Q V++ + +  +T
Sbjct: 515 GVLLNDSELLGIPHRIVIGDRALKEGNVEYAERRNNEAQAVAIGEIVARVT 565


>gi|238026159|ref|YP_002910390.1| prolyl-tRNA synthetase [Burkholderia glumae BGR1]
 gi|237875353|gb|ACR27686.1| Prolyl-tRNA synthetase [Burkholderia glumae BGR1]
          Length = 578

 Score =  141 bits (356), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 56/287 (19%), Positives = 107/287 (37%), Gaps = 13/287 (4%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ + R   +  IA    G+  +   G +  + + + +R ++      E+  P 
Sbjct: 17  DAEIVSHKLMVRAGMIRRIA---GGIYNYLPIGLRSIRKVEAIVREEMNRAGAIELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    LWQ+SG W+ Y   +   K   D       F + P +      +  + +KSYR++
Sbjct: 74  VQPAELWQESGRWEQYGPELLRFKDRKDN-----DFVIGPTHEEVVTDIARNQIKSYRQM 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKD 417
           PV   +  + +R+E      G+MR R F   DA+ F   +    E   K+++  + ++  
Sbjct: 129 PVNFYQIQTKFRDEIRPRF-GVMRGREFIMKDAYSFDKDQAGLKESYRKMYDAYVRVFTR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
            G E   V          GS      A+     +     +     +     L   A    
Sbjct: 188 IGLEFRAVAADNGSIGGSGSHEFHVIADTGEDAIAYCPTSDFAANVEAAEALPLLASRAA 247

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLP--SRFNAFYVNSHSEKCHPVM 522
             E + K A     +C  +    N+P      +  + + +E   P +
Sbjct: 248 PAEAMAKVATPGKAKCEAVAELLNIPLERTIKSIVLATENEGAEPTI 294



 Score = 79.4 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 23/164 (14%), Positives = 57/164 (34%), Gaps = 11/164 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE----NFK 543
           R  + G + Q+         A +++   +   P+ +     G   R +G  IE    +  
Sbjct: 409 RGIEVGHVFQLGTKYSKALGATFLDEGGKPQ-PMEMGCYGIGVT-RILGAAIEQNFDDRG 466

Query: 544 GNLPLWLSPIQAIVTTITSS----AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
              P  ++P + ++  +         E A ++   L +  + +  D R E       +  
Sbjct: 467 IIWPEAIAPFEVVLCPMGYDRSELVRETADQLYAALSAAGIDVILDDRGERPGVMFADWE 526

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  +P  ++ G++   +  I  +    T    +    A   + +
Sbjct: 527 LIGVPHRLVIGERGLKDGKIEYQGRRDTEATLLPADGAAATVIE 570


>gi|328715866|ref|XP_001943193.2| PREDICTED: bifunctional aminoacyl-tRNA synthetase-like [Acyrthosiphon
            pisum]
          Length = 1143

 Score =  141 bits (356), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 75/418 (17%), Positives = 140/418 (33%), Gaps = 83/418 (19%)

Query: 260  EDGSGVIFWHRKGWKIFQTLISYMRRKIKD---DYEEINTPQVLDQHLWQ-QSGHWDSYR 315
             D SG        ++I++ +  +   +IK    + +    P  + Q   + +  H   + 
Sbjct: 634  YDVSGCYVLRPWAYRIWELIQEWFDARIKRKPLNIQNCYFPMFVSQGALEREKEHIADFA 693

Query: 316  ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
              +  V  + +T       A++P +  G    F   ++SYR+LP++L ++ SV R E   
Sbjct: 694  PEVAWVTKSGETDL-AEPIAIRPTSETGMYPAFAKWIQSYRDLPLKLNQWNSVVRWEFK- 751

Query: 376  SLHGLMRVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
                 +R R F   + H  + T+E+   + L        +YK+     ++    T  EK 
Sbjct: 752  HPQPFLRTREFLWQEGHNAYATREEAERDVLITLGYYEYVYKNMLAVPVIKGKKTEKEKF 811

Query: 435  VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
             G                                      +    E  +  + GR  Q  
Sbjct: 812  AGGI------------------------------------FTTTCEAYV-ASSGRAIQGA 834

Query: 495  TIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP- 552
            T      N    F+  + +  + K     +H+  FG   R IG+M+     +  L L P 
Sbjct: 835  TSHYLGTNFAKMFDVHFEHPDTHKKS--FVHQISFGMTTRTIGVMVMVHGDDRGLVLPPR 892

Query: 553  ---IQAIVTT----------ITSSAVEYAQEIANLLK---------------------SH 578
               IQ I+            +  +      ++ N LK                     S 
Sbjct: 893  IASIQVIIVPCGVGVKTSNEVKDNLTRTCLDVCNRLKGDSLIESDDENDNSVIQHRNSSL 952

Query: 579  HLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
             +  +TD R+  +  +K     +K +P+ +  G K+ S   I   R  +     + L 
Sbjct: 953  IIRADTDLRDNYSPGWKFNHWELKGVPLRLEIGPKDLSRNQIIAVRRDNGDKLTIPLE 1010


>gi|254392125|ref|ZP_05007314.1| prolyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|294815425|ref|ZP_06774068.1| Prolyl-tRNA synthetase 1 [Streptomyces clavuligerus ATCC 27064]
 gi|326443777|ref|ZP_08218511.1| prolyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|197705801|gb|EDY51613.1| prolyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|294328024|gb|EFG09667.1| Prolyl-tRNA synthetase 1 [Streptomyces clavuligerus ATCC 27064]
          Length = 566

 Score =  141 bits (356), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 60/341 (17%), Positives = 125/341 (36%), Gaps = 29/341 (8%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++E   H+ L R   +     + +G+  W   G K+ + +   +R +
Sbjct: 9   SRLMVKTLRDDPADAETLSHKLLVRAGYVR---RNAAGIWSWLPLGKKVLENVTRVVREE 65

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E+  P +L +  ++ +G WD Y A +F +K      +    + L P +     
Sbjct: 66  MDAIGAQEVLLPALLPKEPYEITGRWDEYGAELFRLKD-----RKGAEYLLGPTHEEIFT 120

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +      SY++LPV L +  + YR+E      G++R R F   D++ F T ++   E  
Sbjct: 121 QLVKDQCSSYKDLPVILYQIQTKYRDEARPR-SGILRGREFQMKDSYSFDTTDEGLAESY 179

Query: 406 KIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA---ENIMKGVLDTIKNSSQD 461
            +H    I I++  G +  +V   +       S+     A   E+           ++ +
Sbjct: 180 ALHREAYIRIFRRLGLDHRIVSAVSGAMGGSASEEFLAPAAAGEDTFVHCPSCDYAANTE 239

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
            +       E   + P  E +L        +     +     +      V    E     
Sbjct: 240 AVTYVAAAPEAVDH-PAVE-LLDTPDTPTIETLAEHLGVPASATLKNLLVKVDGE----- 292

Query: 522 MIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITS 562
           ++   V G  E  +G + ++        L+P Q  + T   
Sbjct: 293 IVAVGVPGDREVDLGKLADH--------LAPAQVELVTAED 325



 Score = 90.6 bits (223), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 65/174 (37%), Gaps = 12/174 (6%)

Query: 476 GPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
            PK    LK  + R  + G I Q+       F    +  + +     M    +   + R 
Sbjct: 396 CPKCGTGLK--LDRAIEIGHIFQLGRKYADAFQLDVLGQNGKPTRVTMGSYGI--GVSRA 451

Query: 535 IGIMIENFKGN----LPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNE 589
           +  + E          P  ++P    V     +  +E A E+A+ L +  L +  D R  
Sbjct: 452 VAALAEQTADEKGLCWPAEIAPADVHVVAAGKAVQIELALEVADQLAAAGLRVLVDERPG 511

Query: 590 -TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +   K  +  +  +P I++ G + A    + ++   +   +++ + +A+  L 
Sbjct: 512 VSPGVKFTDAELIGVPTILVAGRRSAE-GVVELKDRRTGEREELPVAEAVARLR 564


>gi|323527403|ref|YP_004229556.1| prolyl-tRNA synthetase [Burkholderia sp. CCGE1001]
 gi|323384405|gb|ADX56496.1| prolyl-tRNA synthetase [Burkholderia sp. CCGE1001]
          Length = 578

 Score =  141 bits (356), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 55/287 (19%), Positives = 104/287 (36%), Gaps = 13/287 (4%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ + R   +  +A    G+  +   G +  + + + +R ++      E+  P 
Sbjct: 17  DAEIVSHKLMVRAGMIRRVA---GGIYNYLPIGLRSIRKVEAIVREEMNRAGAIELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    LWQ+SG W+ Y   +   K    +      F + P +      +    +KSYR+L
Sbjct: 74  VQPAELWQESGRWEKYGPELLRFKDRKQS-----DFVIGPTHEEVVTDIARGQIKSYRQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKD 417
           PV   +  + +R+E      G+MR R F   DA+ F        E   K+++  + I+  
Sbjct: 129 PVNFYQIQTKFRDEIRPRF-GVMRGREFIMKDAYSFDKDAAGLRESYRKMYDAYVRIFTR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
            G +   V          GS      AE     +     +     +     L   A    
Sbjct: 188 LGLDFRAVAADNGSIGGSGSHEFHVIAETGEDAIAYCPTSDFAANVEAAEALPLCAERAA 247

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLP--SRFNAFYVNSHSEKCHPVM 522
             E + K       +C  +    N+P      +  + + +E   P +
Sbjct: 248 PAEELKKTPTPGKAKCEAVAEYLNIPLERTIKSIVLATENEGAEPTI 294



 Score = 83.3 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 27/159 (16%), Positives = 60/159 (37%), Gaps = 13/159 (8%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGN 545
           R  + G + Q+        NA  ++ + +   P  +    +G  I R +G  IE NF   
Sbjct: 409 RGIEVGHVFQLGTKYSEAMNATCLDENGK---PQPMEMGCYGVGITRILGAAIEQNFDEK 465

Query: 546 LPLWL---SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
             +W    +P + ++  +    + +  E A ++   L    + +  D R E       + 
Sbjct: 466 GIIWPESIAPFEVVLCPMGYDRSEAVREQADKLYAELVDAGIDVILDDRGERPGVMFADW 525

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
            +  +P  ++ GD+   E  +  +         + + +A
Sbjct: 526 ELIGVPHRLVIGDRGLKEGKLEYQGRRDAEATLLPVDEA 564


>gi|170695316|ref|ZP_02886462.1| prolyl-tRNA synthetase [Burkholderia graminis C4D1M]
 gi|170139716|gb|EDT07898.1| prolyl-tRNA synthetase [Burkholderia graminis C4D1M]
          Length = 578

 Score =  141 bits (356), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 55/287 (19%), Positives = 104/287 (36%), Gaps = 13/287 (4%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ + R   +  +A    G+  +   G +  + + + +R ++      E+  P 
Sbjct: 17  DAEIVSHKLMVRAGMIRRVA---GGIYNYLPIGLRSIRKVEAIVREEMNRAGAIELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    LWQ+SG W+ Y   +   K    +      F + P +      +    +KSYR+L
Sbjct: 74  VQPAELWQESGRWEKYGPELLRFKDRKQS-----DFVIGPTHEEVVTDIARGQIKSYRQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKD 417
           PV   +  + +R+E      G+MR R F   DA+ F        E   K+++  + I+  
Sbjct: 129 PVNFYQIQTKFRDEIRPRF-GVMRGREFIMKDAYSFDKDAAGLRESYRKMYDAYVRIFTR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
            G +   V          GS      AE     +     +     +     L   A    
Sbjct: 188 LGLDFRAVAADNGSIGGSGSHEFHVIAETGEDAIAYCPTSDFAANVEAAEALPLYAQRAA 247

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLP--SRFNAFYVNSHSEKCHPVM 522
             E + K       +C  +    N+P      +  + + +E   P +
Sbjct: 248 PAEELKKTPTPGKAKCEAVAEYLNIPLERTIKSIVLATENEGAEPTI 294



 Score = 83.7 bits (205), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 27/159 (16%), Positives = 60/159 (37%), Gaps = 13/159 (8%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGN 545
           R  + G + Q+        NA  ++ + +   P  +    +G  I R +G  IE NF   
Sbjct: 409 RGIEVGHVFQLGTKYSEAMNATCLDENGK---PQPMEMGCYGVGITRILGAAIEQNFDDK 465

Query: 546 LPLWL---SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
             +W    +P + ++  +    + +  E A ++   L    + +  D R E       + 
Sbjct: 466 GIIWPESIAPFEVVLCPMGYDRSEAVREQADKLYAELVEAGIDVILDDRGERPGVMFADW 525

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
            +  +P  ++ GD+   E  +  +         + + +A
Sbjct: 526 ELIGVPHRLVIGDRGLKEGKLEYQGRRDAEATLLPVDEA 564


>gi|167564170|ref|ZP_02357086.1| prolyl-tRNA synthetase [Burkholderia oklahomensis EO147]
 gi|167571291|ref|ZP_02364165.1| prolyl-tRNA synthetase [Burkholderia oklahomensis C6786]
          Length = 578

 Score =  141 bits (356), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 44/207 (21%), Positives = 84/207 (40%), Gaps = 11/207 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ + R   +  +A    G+  +   G +  + + + +R ++      E+  P 
Sbjct: 17  DAEIVSHKLMVRAGMIRRVA---GGIYNYLPIGLRSIRKVEAIVREEMNRAGAIELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    LWQ+SG W+ Y   +   K      +    F + P +      +  + +KSYR++
Sbjct: 74  VQPAELWQESGRWEQYGPELLRFKD-----RKQNDFVIGPTHEEVITDIARNQIKSYRQM 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKD 417
           PV   +  + +R+E      G+MR R F   DA+ F    E +     K+++  + ++  
Sbjct: 129 PVNFYQIQTKFRDEIRPRF-GVMRGREFLMKDAYSFDRDHEGLKESYKKMYDAYVRVFTR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDA 444
            G E   V          GS      A
Sbjct: 188 IGLEFRPVAADNGSIGGSGSHEFHVIA 214



 Score = 85.6 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 62/164 (37%), Gaps = 11/164 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNL 546
           R  + G + Q+         A +++    K  P+++     G I R +G  IE NF    
Sbjct: 409 RGIEVGHVFQLGTKYSEAMGATFIDESG-KAQPMVMGCYGIG-ITRILGAAIEQNFDDKG 466

Query: 547 PLWL---SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
            +W    +P + ++  +    + +  E A ++   L +  + +  D R E       +  
Sbjct: 467 IIWPEAIAPFEVVLCPMGYDRSDAVREAADQLYAALAAAGVDVILDDRGERPGVMFADWE 526

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  +P  ++ G++   +  +  +         +    A  ++ +
Sbjct: 527 LIGVPHRLVIGERGLKDGKVEYQGRRDAEATLLPADSAAAVIVE 570


>gi|160902700|ref|YP_001568281.1| prolyl-tRNA synthetase [Petrotoga mobilis SJ95]
 gi|189083505|sp|A9BGA8|SYP_PETMO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|160360344|gb|ABX31958.1| prolyl-tRNA synthetase [Petrotoga mobilis SJ95]
          Length = 582

 Score =  141 bits (356), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 57/269 (21%), Positives = 101/269 (37%), Gaps = 24/269 (8%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++           +S+ + +  L R   +  I+   SGV  +   GWK+ + +   +R 
Sbjct: 3   FSKLYAPTLKETPSDSDIKSYELLIRGGFIRKIS---SGVYSYLPLGWKVIRKIEQIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           +++    +EI  P +    LW+ +G W+ Y   +  +K   D     R F L P +    
Sbjct: 60  EMEKIGSQEIMLPIIHPAELWKMTGRWEDYGPELMKLKDRHD-----REFTLGPTHEEIV 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L+SY++ PV L +  + +R+E       L R R F   DA+ F T     +E 
Sbjct: 115 TFLMKNELRSYKQFPVNLFQIATKFRDEIRPRFGVL-RAREFIMKDAYTFHTDYNSLHES 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA----------ENIMKGVLD 453
            +  +N   +I K  G + ++V+  T       S      A          E       D
Sbjct: 174 YQHFYNAYENIIKRIGLKYVVVEADTGAIGGSFSHEFHVLAQNGEGEIFYCEKCGYAASD 233

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
               S +D     V   E      K +  
Sbjct: 234 EKARSGED---FSVDENEAFKEMEKVDTQ 259



 Score = 67.5 bits (163), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 27/147 (18%), Positives = 60/147 (40%), Gaps = 9/147 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I ++     S+ NA + + + E+  P ++    +G       I+ +    N  
Sbjct: 407 RGIEVGQIFELGDKYSSKMNAVFTDENGEQK-PYIMGCYGWGVSRTLGAIVEQLNDENGI 465

Query: 548 LWL---SPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W    +P +  +  +     + V  +QEI +      + +  D R  +  +K ++  + 
Sbjct: 466 IWPKSVAPFEVAIIPVAMNDEAIVSTSQEIYDYFLKEGIDVIIDDREVSAGFKFKDIDLI 525

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTT 628
            +PI II G +   E  I +++     
Sbjct: 526 GVPIKIIIGKR-LKEGKIELKQRDKEE 551


>gi|295677734|ref|YP_003606258.1| prolyl-tRNA synthetase [Burkholderia sp. CCGE1002]
 gi|295437577|gb|ADG16747.1| prolyl-tRNA synthetase [Burkholderia sp. CCGE1002]
          Length = 578

 Score =  141 bits (356), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 57/287 (19%), Positives = 107/287 (37%), Gaps = 13/287 (4%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ + R   +  +A    G+  +   G +  + + + +R ++      E+  P 
Sbjct: 17  DAEIISHKLMVRAGMIRRVA---GGIYNYLPVGLRSIRKVEAIVREEMNRAGAIELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    LWQ+SG W+ Y   +   K      +    F L P +      +  + +KSYR+L
Sbjct: 74  VQPAELWQESGRWEKYGPELLRFKD-----RRQGDFVLGPTHEEVVTDIARNQIKSYRQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKD 417
           PV   +  + +R+E      G+MR R F   DA+ F    E +     K+++  + I+  
Sbjct: 129 PVNFYQIQTKFRDEIRPRF-GVMRGREFIMKDAYSFDKDAEGLRESYRKMYDAYVRIFTR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
            G E   V          GS      A+     +     +     +     L   A    
Sbjct: 188 LGLEFRAVAADNGSIGGSGSHEFHVIADTGEDAIAYCPSSDFAANVEAADALPLIAQRAA 247

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLP--SRFNAFYVNSHSEKCHPVM 522
             E + K A     +C  +    N+P      +  + + +E   P +
Sbjct: 248 PAEDMKKTATPGKAKCEAVAELLNIPLERTIKSVILATENEGAEPTI 294



 Score = 83.3 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 59/158 (37%), Gaps = 11/158 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNL 546
           R  + G + Q+        NA  ++   +   P+ +     G   R +G  IE NF    
Sbjct: 409 RGIEVGHVFQLGTKYSEAMNATCLDETGKPQ-PMEMGCYGIGVT-RILGAAIEQNFDDKG 466

Query: 547 PLWL---SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
            +W    +P + ++  +    + +  E A ++   L +  + +  D R E       +  
Sbjct: 467 IIWPESIAPFEVVLCPMGYDRSDAVREQADKLYAELAAAGIDVILDDRGERPGVMFADWE 526

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
           +  +P  ++ GD+   +  I  +         + + DA
Sbjct: 527 LIGVPHRLVIGDRGLKDGKIEYQGRRDAEATLLPVADA 564


>gi|161833740|ref|YP_001597936.1| prolyl-tRNA synthetase [Candidatus Sulcia muelleri GWSS]
 gi|152206230|gb|ABS30540.1| prolyl-tRNA synthetase [Candidatus Sulcia muelleri GWSS]
          Length = 489

 Score =  141 bits (356), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 69/402 (17%), Positives = 146/402 (36%), Gaps = 73/402 (18%)

Query: 270 RKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCA--- 324
             G+ I++ +   + + +K   ++ +  P ++ +  + ++  H   +      +      
Sbjct: 38  PYGFSIWEKIKFILDKILKSTGHKNVYFPLLIPKSYFSKEYNHIKGFAKECAVITHYRLK 97

Query: 325 ---------DDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
                    D   K      ++P +       +   + SYR+LP+R  ++ ++ R E   
Sbjct: 98  NFNNKNIIVDKNSKLEDELIVRPTSETIIWNSYKRWINSYRDLPIRFNQWANIIRWERR- 156

Query: 376 SLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
                +R   F   + H    TK++  N+  KI N+  +  ++F    ++  + T  EK 
Sbjct: 157 -TRFFLRTSEFLWQEGHTAHSTKKEAINQAKKIINIYTNFLENFIAIPVIQGIKTYSEKF 215

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
            G++  +                                      E I++D  G+  Q  
Sbjct: 216 AGAEETY------------------------------------CIESIMQD--GKSLQIA 237

Query: 495 TIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLW 549
           T   +  N    F+  Y      K +   +    +G   R IG +I    ++    LP  
Sbjct: 238 TSHFLGQNFSKAFDVRYTTEKGNKEY---VWATSWGISTRLIGAIIMTHSDDNGLILPPK 294

Query: 550 LSPIQAIVTTITSSAVEY------AQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKK 602
           ++P+Q ++  +  +  +          +   L+   +SI+ D R   T  +K  E+ IK 
Sbjct: 295 IAPLQIVIIPVYKTQEQLNLIEKLVLPLKESLEKRGISIKYDKRTYYTPGWKFNEYEIKG 354

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKV---SLLDAIPIL 641
           IPI I  G K+    ++ + R  +   + +    L   IP +
Sbjct: 355 IPIRITIGKKDIDRGTVEVVRRDTLEKKDIIINKLEFLIPKI 396


>gi|84394652|ref|ZP_00993343.1| prolyl-tRNA synthetase [Vibrio splendidus 12B01]
 gi|84374725|gb|EAP91681.1| prolyl-tRNA synthetase [Vibrio splendidus 12B01]
          Length = 551

 Score =  141 bits (356), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 47/229 (20%), Positives = 90/229 (39%), Gaps = 11/229 (4%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQH 303
            H+ + R   +  +A   SG+  W   G ++ + + + +R++I      EI  P V    
Sbjct: 2   SHQLMLRAGMIRKLA---SGLYTWLPTGLRVLRKVENIVRQEIDNAGAVEILMPVVQPFE 58

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++G  +     +        T +  R F L P       ++  + + SY++LP+ L 
Sbjct: 59  LWEETGRSEKMGPELLRF-----TDRHSRPFVLSPTAEEVVTSLVRNEISSYKQLPLNLY 113

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEK 422
           +  + +R+E      G+MR R F+  DA+ F    E +      +H+     +   G E 
Sbjct: 114 QIQTKFRDERRPRF-GVMRAREFSMMDAYSFDIDKEGLEKSYQAMHDAYCKAFDRMGLEY 172

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
             V   +      GS      AE+    +  + ++     I     L  
Sbjct: 173 RPVLADSGAIGGSGSQEFHVLAESGEDLIAFSSESDYAANIEKAEALAP 221



 Score = 85.6 bits (210), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 61/168 (36%), Gaps = 13/168 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           + R  + G I Q+        N   +    +    V++    +G  + R +   IE    
Sbjct: 385 LKRGIEVGHIFQLGNTYSKAMNCNVLGPDGKS---VILEMGCYGIGVSRVVASAIEQNHD 441

Query: 545 N----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                 P  L+P Q  +  +    +    E A+++   L +  + +  D R E      +
Sbjct: 442 KFGITWPDALAPFQVAIIPMNMHKSERVKEAAEKLYAELTAMGIEVLFDDRKERPGVMFK 501

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  +  IP  I+ GD+   E +   +   +   + +++   I  L  +
Sbjct: 502 DIELVGIPHTIVIGDRSMDEGNFEYKNRRTGDKEVIAMDTVIEHLKAQ 549


>gi|300023435|ref|YP_003756046.1| prolyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888]
 gi|299525256|gb|ADJ23725.1| prolyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888]
          Length = 510

 Score =  141 bits (355), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 77/441 (17%), Positives = 157/441 (35%), Gaps = 78/441 (17%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
            EE+    ++ + R+ D+   +     +I     GW +++ L + +  +IKD  ++    
Sbjct: 10  REENFPDWYQAIVRDGDMAETSPVRGCMII-KPWGWGVWERLQAELDARIKDTGHDNCYF 68

Query: 297 PQVLDQHL-WQQSGHWDSYRANMFAVKCA-----------DDTIKDLRTFALKPMNCPGH 344
           P  +      +++ H + +   M  V              D   K      ++P +    
Sbjct: 69  PLFIPMSFIAKEAEHVEGFAKEMAVVTHHRLKNEGGKLVVDPDAKLEEPLIVRPTSETII 128

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
              F   +KSYR+LP+ + ++ +V R E        +R   F   + H      +    E
Sbjct: 129 GDAFQRWIKSYRDLPLLVNQWANVVRWEMR--TRLFLRTAEFLWQEGHTAHADKDDAVAE 186

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            LK+      +Y+ F                         AE+++   +   +  + +R 
Sbjct: 187 TLKML----EVYRTF-------------------------AEDVLAMPVIAGEKPANERF 217

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVM 522
                   GA      E +++D  G+  Q GT      +     N  + N+  +  +   
Sbjct: 218 P-------GADNTYSIEAMMQD--GKALQAGTSHYLGTHFAEAQNIQFQNADGKLTY--- 265

Query: 523 IHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI------TSSAVEYAQEIA 572
            H   +G   R IG +I    ++    LP  ++P Q ++  +       ++ +EY   + 
Sbjct: 266 CHTTSWGVSTRLIGGVIMTHGDDDGLRLPPAIAPRQIVIVPMLREKPEDAALIEYCAALE 325

Query: 573 NLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT---- 628
             LK+  +    D +      K      +  P+I+  G ++AS  ++   R         
Sbjct: 326 KDLKAAGIRTLVDAKAVKSAEKRWNWVRRGAPVIVEIGGRDASGGNVTFMRRDKLRDGDK 385

Query: 629 --TQKVSLLDAI---PILTKE 644
             +Q +   D +   P L KE
Sbjct: 386 VISQTLPRADFVSQAPALLKE 406


>gi|167624874|ref|YP_001675168.1| prolyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
 gi|189083514|sp|B0TNJ5|SYP_SHEHH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|167354896|gb|ABZ77509.1| prolyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
          Length = 570

 Score =  141 bits (355), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 44/245 (17%), Positives = 88/245 (35%), Gaps = 11/245 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  L+        +E   H+ + R   +     + SG+  W   G ++ + + + +R +
Sbjct: 4   SKYLLSTQKETPANAEVVSHQLMLRAGMIR---RNASGLYSWLPTGLRVLRKIEAIVREE 60

Query: 287 IK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      EI  P V    LW ++G ++ +   +   +      +  R F L P +     
Sbjct: 61  MNKAGSVEILMPMVQPADLWVETGRFEKFGPELLRFQD-----RHNRDFVLGPTHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +    + SY++LP+ L +  + +R+E      G+MR R F   DA+ F    E M    
Sbjct: 116 DIVRKEVNSYKQLPLNLYQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHIDQETMDETY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
             +     +I    G     V   T       S      A +    +  + ++     I 
Sbjct: 175 EAMFQAYNNILTRLGLSFRPVMADTGSIGGSMSHEFHVLANSGEDLIAYSTESDYAANIE 234

Query: 465 TGVLL 469
                
Sbjct: 235 KCEAP 239



 Score = 87.5 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 67/199 (33%), Gaps = 17/199 (8%)

Query: 462 RINTGVLLGEGAFYGPKFEYILKD--------AIGRDWQCGTI-QVDFNLPSRFNAFYVN 512
            IN    L E A +  +     +         A+ R  + G I Q+  N     NA  ++
Sbjct: 371 GINWERDLPEAAAFDLRNIIEGEPSPCGKGVIALLRGIEVGHIFQLGTNYSEAMNANVLD 430

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL---SPIQAIVTTI----TSSAV 565
            + +    +++     G        + +N      +W    +P    +  +    +    
Sbjct: 431 QNGKSKT-LLMGCYGVGVSRMVAAAIEQNNDDRGIIWPDAIAPFTVGILPMNMHKSHRVK 489

Query: 566 EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
           + A+++   L    + +  D R E       +  +  IP +++ GD+         +   
Sbjct: 490 DIAEQLYQDLNDAGIEVMFDDRKERPGVMFADMELIGIPHVVVIGDRNIDNGMFEYKNRR 549

Query: 626 STTTQKVSLLDAIPILTKE 644
           +   Q + L D +  L  +
Sbjct: 550 TGEKQDIPLGDIVEFLKAQ 568


>gi|325290366|ref|YP_004266547.1| Prolyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
 gi|324965767|gb|ADY56546.1| Prolyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
          Length = 571

 Score =  141 bits (355), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 45/195 (23%), Positives = 79/195 (40%), Gaps = 11/195 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q           E+E   H+ + R   +  +A    GV  +     ++ + +   +R +
Sbjct: 4   SQLLNPTLREVPAEAEIVSHQLMLRAGFIRKVA---GGVYTYLPLALRVLRKIEQIIREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E+  P V    LW+++  WD Y   MF +K   D     R F L P +     
Sbjct: 61  MNAKGGQELLLPIVQPSELWKETKRWDIYGPEMFRLKDRHD-----REFCLGPTHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +    ++SY++LP+ L +  + YR+E      GLMR R F   D + F    E      
Sbjct: 116 DLVRGEVRSYKQLPLLLYQIQNKYRDERRPRF-GLMRGREFIMKDLYSFDRDAEAGAESY 174

Query: 405 LKIHNLIISIYKDFG 419
            K++     I+   G
Sbjct: 175 RKMYEAYTKIFSRCG 189



 Score = 82.5 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 65/173 (37%), Gaps = 10/173 (5%)

Query: 476 GPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
            P     L++A G +   G +  +         A Y++   ++    M      G     
Sbjct: 395 CPCCGVPLQEARGIE--VGQVFNLGTKYSEALKATYLDEKGQEKLCYM-GCYGIGVSRTM 451

Query: 535 IGIMIENFKGNLPLWLSPIQA---IVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRN 588
              + +N   N  +W  PI     I+  ++    + VE ++++   +    + +  D R+
Sbjct: 452 AAAIEQNHDTNGVIWPIPIAPFECIIVPVSLKSEAVVETSEKLYAQMLEAGIEVIIDDRD 511

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           E    K ++  +   P+ I  G+K  +E  + + R  +   + + +   +  +
Sbjct: 512 ERPGVKFKDADLIGYPLRINIGEKSLAEGKVELFRRKTGQMELLDIEQVMTTV 564


>gi|170078264|ref|YP_001734902.1| prolyl-tRNA synthetase [Synechococcus sp. PCC 7002]
 gi|226701348|sp|B1XP53|SYP_SYNP2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|169885933|gb|ACA99646.1| prolyl-tRNA synthetase [Synechococcus sp. PCC 7002]
          Length = 601

 Score =  141 bits (355), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 49/254 (19%), Positives = 96/254 (37%), Gaps = 12/254 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q           ++E   H+ L R   +  I   G G+  +    W++ Q +   +R +
Sbjct: 4   SQSLFVTLREDPADAEIPSHKLLLRAGYIRRI---GRGIYAYLPLMWRVLQKVSQIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E   PQ+    +WQ+SG WD+Y      +    D  +      L P +     
Sbjct: 61  MNATGAQETLLPQLQPAEIWQESGRWDTYTQAEGIMFSLRD--RLDGELGLGPTHEEVIT 118

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    ++SYR+LP  L +  + +R+E      GLMR R F   D + F   E+   +  
Sbjct: 119 TIAKDMIRSYRQLPQHLYQIQTKFRDEIRPRF-GLMRGREFIMKDGYSFHASEECLKKTY 177

Query: 406 -KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL----DTIKNSSQ 460
             +     ++ +  G +   V+  +      GS      A+     +L    +    +++
Sbjct: 178 ADMDQAYRNMLRRCGLQFRAVEADSGAIGGSGSQEFMILADAGEDEILYTEDEKYAANTE 237

Query: 461 DRINTGVLLGEGAF 474
             ++  V      F
Sbjct: 238 KAVSLPVEAIASPF 251



 Score = 93.7 bits (231), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 29/162 (17%), Positives = 61/162 (37%), Gaps = 9/162 (5%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I Q+         A + + +  K HP+++     G        + +++  N  
Sbjct: 435 RGIEAGHIFQLGTKYSEAMGATFTDENG-KEHPLVMGCYGVGVSRLAQAAVEQSYDENGI 493

Query: 548 LWL---SPIQAIVTT---ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W    +P  A+V      +   +  A+++   L +  +    D RNE    K ++  + 
Sbjct: 494 IWPVAIAPYHAVVVVPNVKSEEQMAAAEKLYADLNAAGVETILDDRNERAGVKFKDAELI 553

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            IP  ++ G K   +  + + R      Q + L   +  L  
Sbjct: 554 GIPFRVVTG-KSLKDGKVEVVRRKEGDRQDLDLDAVVATLKN 594


>gi|157376262|ref|YP_001474862.1| prolyl-tRNA synthetase [Shewanella sediminis HAW-EB3]
 gi|157318636|gb|ABV37734.1| prolyl-tRNA synthetase [Shewanella sediminis HAW-EB3]
          Length = 584

 Score =  141 bits (355), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 55/329 (16%), Positives = 112/329 (34%), Gaps = 18/329 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  L+       ++E   H+ + R   +     + SG+  W   G ++ + + + +R +
Sbjct: 19  SKYLLSTQKETPADAEVISHQLMLRAGMIR---RNASGLYSWLPTGLRVLRKVEAIVREE 75

Query: 287 IK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      EI  P V    LW ++G ++ +   +   +      +  R F L P +     
Sbjct: 76  MNKAGSVEILMPMVQPADLWVETGRFEKFGPELLRFQD-----RHNRDFVLGPTHEEVIT 130

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +    + SY++LP+ L +  + +R+E      G+MR R F   DA+ F    E M    
Sbjct: 131 DIVRKEVNSYKQLPLNLFQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHLDQETMDETY 189

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
             +     +I    G     V   T       S      A +    +  + ++     I 
Sbjct: 190 ETMFQAYNNILTRLGLAFRPVMADTGSIGGSMSHEFHVLANSGEDLIAYSTESDYAANIE 249

Query: 465 TGVLLGEGAFY-GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
                        P  E  L +          ++       +     +   + +  P ++
Sbjct: 250 KAEAPMPTETRQAPALEMSLVNTPKAKTIAELVEHHGIAIEKTVKTLIVKGATEETP-LV 308

Query: 524 HRAVFGSIERFIGIMIENFKGNLPLWLSP 552
              V G  E     + E     +P  L+P
Sbjct: 309 ALVVRGDHE-----LNEVKAEKIPAVLAP 332



 Score = 78.7 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 24/166 (14%), Positives = 60/166 (36%), Gaps = 11/166 (6%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           A+ R  + G I Q+  N     NA  ++ + +    +++     G   R +   IE    
Sbjct: 418 ALLRGIEVGHIFQLGKNYSEAMNANVLDHNGKAQT-LLMGCYGVGVS-RMVAAAIEQNHD 475

Query: 545 N----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +     P  ++P +  +  +    +    + A+++   ++     +  D R E       
Sbjct: 476 DRGITWPDAIAPFRVGILPMNMHKSHRVKDMAEKLYQDMQDAGFEVLFDDRKERAGVMFA 535

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +  +  +P +++ GD+         +   +   Q++     I  L 
Sbjct: 536 DMELVGLPHVVVIGDRNIDNGVFEYKNRRTGEKQEIPFDQIIDFLK 581


>gi|51245016|ref|YP_064900.1| prolyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
 gi|81826866|sp|Q6AP31|SYP_DESPS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|50876053|emb|CAG35893.1| probable prolyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
          Length = 570

 Score =  141 bits (355), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 45/221 (20%), Positives = 88/221 (39%), Gaps = 11/221 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  +        E+E   H+ + R   +  ++   SGV  +   G    + + + +R +
Sbjct: 4   SQSFIPTKKETPAEAEVASHQLMLRAGFMRKLS---SGVYSYLPYGLAAIRKVENIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E+  P V    LW+++G ++ Y   +      ++     R   L P +     
Sbjct: 61  MNRAGAQEMLMPMVQPADLWKETGRYEKYGPELLRFFDRNN-----RESCLGPTHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +  + L SYR+LP+ L +  + +R+E      GLMR R F   DA+ F   ++  N   
Sbjct: 116 DIVRNELSSYRDLPINLYQIQTKFRDEIRPRF-GLMRGREFVMKDAYSFDVDDEQANLSY 174

Query: 406 -KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
            K+      I+   G +   V+  +       S      A+
Sbjct: 175 DKMFEAYKRIFTRCGLQFRPVQADSGAIGGSHSHEFMVLAK 215



 Score = 85.2 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 57/153 (37%), Gaps = 9/153 (5%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPI 553
           +        NA + +   ++  P ++     G   R +   IE          P+ L+P 
Sbjct: 412 LGTGYSESMNARFQDGTGDEK-PFVMGCYGIGVS-RVVAAAIEQNHDKDGIIFPVPLAPY 469

Query: 554 QAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
              V  +          A+++   L++  LS+  D R+E    K ++  +  IP  +  G
Sbjct: 470 TVTVLNLGLKDPEITAAAEKLYAELQAAGLSVLLDDRDERPGAKFKDADLLGIPYRLTVG 529

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              A    + +RR     T++++   A   L +
Sbjct: 530 KGLAKNGMVEVRRRRDGHTEEMTPEVAADFLAR 562


>gi|302876555|ref|YP_003845188.1| prolyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|307687227|ref|ZP_07629673.1| prolyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|302579412|gb|ADL53424.1| prolyl-tRNA synthetase [Clostridium cellulovorans 743B]
          Length = 566

 Score =  141 bits (355), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 49/221 (22%), Positives = 91/221 (41%), Gaps = 11/221 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        E+E   H+ + R   +  +A   SGV  +   G K  + +   +R +
Sbjct: 4   SKALMLTMREVPAEAEISSHQLMLRAGLMRKMA---SGVYNYMPMGLKALKKVEDIIRDE 60

Query: 287 IK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E     ++   LW++SG WD+    MF +K  +D     R F L P +     
Sbjct: 61  MDKAGAQEFLASALIPAELWKESGRWDTMGPEMFRLKDRND-----RDFCLGPTHEEVFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +  + +KSY++LP+ L +  + YR+E      G+MR R F   DA+ F    E +    
Sbjct: 116 DIARNEIKSYKQLPITLYQIQTKYRDERRPRF-GVMRSREFVMKDAYSFDKDSEGLDISY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
             ++    +I+     E    +  +      GS      +E
Sbjct: 175 NAMYEAYKNIFFRCDIECKAAEADSGAMGGSGSAEFMVKSE 215



 Score = 91.8 bits (226), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 32/175 (18%), Positives = 67/175 (38%), Gaps = 9/175 (5%)

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
            PK    +  A G +      ++        NA + +    +  P ++     G      
Sbjct: 391 CPKCGAPINIARGIEV-GHIFKLGTKYSESMNAVFTDQDGTQK-PFIMGCYGIGVNRTLA 448

Query: 536 GIMIENFKGNLPLWL---SPIQAIVTT---ITSSAVEYAQEIANLLKSHHLSIETDFRNE 589
            ++ ++   N  +W    +P Q IV          ++ A+E+ + LK+  + +  D RNE
Sbjct: 449 AVIEQHNDENGIIWPLEVAPYQVIVVPAVFKDEVQMKKAEELYDALKAIGVDVILDDRNE 508

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
               K ++  +  IP+ I  G K  +E  +  +   S   + ++    I  + +E
Sbjct: 509 RAGIKFKDADLLGIPMRITVGKK-IAEGEVEFKLRSSADLEVIAYDKVIDRVKEE 562


>gi|296269038|ref|YP_003651670.1| prolyl-tRNA synthetase [Thermobispora bispora DSM 43833]
 gi|296091825|gb|ADG87777.1| prolyl-tRNA synthetase [Thermobispora bispora DSM 43833]
          Length = 580

 Score =  141 bits (355), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 41/203 (20%), Positives = 80/203 (39%), Gaps = 11/203 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +  +A    GV  W   G  + + +   +R ++     +E+  P 
Sbjct: 19  DAELPSHKLLVRAGYIRRVA---PGVYSWLPLGKIVLENIARVVREEMDRMGAQEVLFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++ +G W  Y   +F +K      +    + L P +      +    L SY++ 
Sbjct: 76  LLPREYYEATGRWTEYGDTLFRLKD-----RKGADYLLGPTHEEMFTDMVKGELSSYKDF 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKD 417
           PV L +  + YR+E      GL+R R F   D++ F   +       + H    I I+  
Sbjct: 131 PVTLYQIQTKYRDEARPR-AGLLRAREFVMKDSYSFDLDDDGLKRSYEAHRETYIRIFDR 189

Query: 418 FGFEKIMVKLSTRPEKRVGSDAL 440
            G +  +    +       S+  
Sbjct: 190 LGLDYRICFAVSGAMGGSASEEF 212



 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/165 (19%), Positives = 64/165 (38%), Gaps = 12/165 (7%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFK 543
           +I R  + G I Q+            +    +   P+ I    +G  + R + ++ E   
Sbjct: 415 SIDRGIEIGHIFQLGRKYSDAAGLDALGPDGK---PIRITMGSYGIGVSRLVAVIAEQRH 471

Query: 544 GNLPL-WL---SPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNE-TINYKIRE 597
             L L W    +P    +        +E A E+A  L+S  L +  D R   +   K ++
Sbjct: 472 DELGLVWPREVAPADVHIVGTGKENQIEVAVELAETLESRGLRVLVDDRPGVSPGVKFKD 531

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             +  +P I+I G +  +   + +R   S   +++ L +A   + 
Sbjct: 532 AELLGMPTIVIVG-RGLANGVLELRDRASGAREEIPLGEAADRIV 575


>gi|91223451|ref|ZP_01258716.1| prolyl-tRNA synthetase [Vibrio alginolyticus 12G01]
 gi|269966231|ref|ZP_06180320.1| prolyl-tRNA synthetase [Vibrio alginolyticus 40B]
 gi|91191537|gb|EAS77801.1| prolyl-tRNA synthetase [Vibrio alginolyticus 12G01]
 gi|269829146|gb|EEZ83391.1| prolyl-tRNA synthetase [Vibrio alginolyticus 40B]
          Length = 571

 Score =  141 bits (355), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 45/241 (18%), Positives = 95/241 (39%), Gaps = 11/241 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +   L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R+
Sbjct: 3   TSNYLLSTLKETPNDAEVVSHQLMLRAGMIRKLA---SGLYTWLPTGLRVLRKVENIVRQ 59

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           +I      E   P V    LW+++G  +     +        T + +R F L P      
Sbjct: 60  EIDNAGAVETLMPVVQPFELWEETGRSEKMGPELLRF-----TDRHVRPFVLSPTAEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
            ++  + + SY++LP+ L +  + +R+E      G+MR R F+  DA+ F    + +   
Sbjct: 115 TSLVRNEVSSYKQLPLNLYQIQTKFRDERRPRF-GVMRSREFSMMDAYSFDIDKDGLQKS 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +H+     +   G +   V   +      GS      AE+    +  + ++     I
Sbjct: 174 YDAMHDAYCKAFDRMGLDYRPVLADSGAIGGSGSQEFHVLAESGEDIIAFSSESDYAANI 233

Query: 464 N 464
            
Sbjct: 234 E 234



 Score = 84.1 bits (206), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 61/168 (36%), Gaps = 13/168 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           + R  + G I Q+     +  N   +    +    V++    +G  I R +   IE    
Sbjct: 405 LKRGIEVGHIFQLGNAYSAAMNCGVLGPDGKN---VILEMGCYGIGITRVVAAAIEQNHD 461

Query: 545 N----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                 P  ++P Q  +  +    +    E A+++   L +  + +  D R E       
Sbjct: 462 KYGIIWPDAIAPFQVAIVPMNMHKSEEVKEAAEKLYAELTAMGIEVLFDDRKERPGVMFS 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  +  +P  II GD+   E +   +   +     V++ D +  +  +
Sbjct: 522 DMELIGVPHTIIIGDRSMKEGNFEYKNRATGEKTAVAMTDIVEHVKAQ 569


>gi|254229498|ref|ZP_04922912.1| prolyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|262393498|ref|YP_003285352.1| prolyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|151937963|gb|EDN56807.1| prolyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|262337092|gb|ACY50887.1| prolyl-tRNA synthetase [Vibrio sp. Ex25]
          Length = 571

 Score =  141 bits (355), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 45/241 (18%), Positives = 95/241 (39%), Gaps = 11/241 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +   L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R+
Sbjct: 3   TSNYLLSTLKETPNDAEVVSHQLMLRAGMIRKLA---SGLYTWLPTGLRVLRKVENIVRQ 59

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           +I      E   P V    LW+++G  +     +        T + +R F L P      
Sbjct: 60  EIDNAGAVETLMPVVQPFELWEETGRSEKMGPELLRF-----TDRHVRPFVLSPTAEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
            ++  + + SY++LP+ L +  + +R+E      G+MR R F+  DA+ F    + +   
Sbjct: 115 TSLVRNEVSSYKQLPLNLYQIQTKFRDERRPRF-GVMRSREFSMMDAYSFDIDKDGLQKS 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +H+     +   G +   V   +      GS      AE+    +  + ++     I
Sbjct: 174 YDAMHDAYCKAFDRMGLDYRPVLADSGAIGGSGSQEFHVLAESGEDIIAFSTESDYAANI 233

Query: 464 N 464
            
Sbjct: 234 E 234



 Score = 84.4 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 61/168 (36%), Gaps = 13/168 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           + R  + G I Q+     +  N   +    +    V++    +G  I R +   IE    
Sbjct: 405 LKRGIEVGHIFQLGNAYSAAMNCGVLGPDGKN---VILEMGCYGIGITRVVAAAIEQNHD 461

Query: 545 N----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                 P  ++P Q  +  +    +    E A+++   L +  + +  D R E       
Sbjct: 462 KYGIIWPDAIAPFQVAIVPMNMHKSEEVKEAAEKLYAELTAMGIEVLFDDRKERPGVMFS 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  +  +P  II GD+   E +   +   +     V++ D I  +  +
Sbjct: 522 DMELIGVPHTIIIGDRSMKEGNFEYKNRATGEKTPVAMTDIIEHVKAQ 569


>gi|93005293|ref|YP_579730.1| prolyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
 gi|114152235|sp|Q1QDK7|SYP_PSYCK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|92392971|gb|ABE74246.1| prolyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
          Length = 572

 Score =  141 bits (355), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 48/246 (19%), Positives = 97/246 (39%), Gaps = 13/246 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q           +++    + + R   +  IA   SG+  W   G ++ Q +   +R 
Sbjct: 3   ASQFLFATLKETPSDADIASSQLMVRAGLIRKIA---SGLYIWLPMGLRVLQKVERIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++++   +E+  P      LWQ +G ++ Y   +   K   D     R F L P +    
Sbjct: 60  EMQNIGAQEVLMPMTQPAELWQLTGRFNDYGPELLRFKDRHD-----RDFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    L+SY++LP+   +  + +R+E      G+MR R FT  DA+ F   +    + 
Sbjct: 115 TNLAQGELRSYKQLPITFFQIQNKFRDEIRPRF-GVMRAREFTMKDAYSFHVDQASLAKT 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             ++++    I+   G +   V+  T       S      A++    +     +SS+   
Sbjct: 174 YDEMYDAYTRIFTRLGLDFRAVQADTGSIGGFASHEFHVLADSGEDDI--AFSDSSEYAA 231

Query: 464 NTGVLL 469
           N  +  
Sbjct: 232 NVELAE 237



 Score = 84.4 bits (207), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 63/171 (36%), Gaps = 18/171 (10%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           I R  + G I Q+        N        +   PV +    +G  + R I   IE N  
Sbjct: 403 IKRGIEVGHIFQLGDKYSQAMNCTVSGEDGK---PVTLMMGCYGIGVSRIIAAAIEQNND 459

Query: 544 GNLPLW---------LSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETI 591
            N  +W         L+P +  +  +     + +E A  +   LK+  +++  D RNE  
Sbjct: 460 ENGIMWPSTPDISDSLAPFEVAIVPMKSKEDTVMETATALYEELKALGINVLLDDRNERP 519

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             K  +  +  IP  I+  D+  +E          +  Q +S  + I  ++
Sbjct: 520 GVKFADLELIGIPHRIVVSDRNLAEDKYEYVNRRDSEKQLLSRDEVIAKVS 570


>gi|327398599|ref|YP_004339468.1| Prolyl-tRNA synthetase [Hippea maritima DSM 10411]
 gi|327181228|gb|AEA33409.1| Prolyl-tRNA synthetase [Hippea maritima DSM 10411]
          Length = 578

 Score =  141 bits (355), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 58/287 (20%), Positives = 112/287 (39%), Gaps = 19/287 (6%)

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEI 294
              +E+    H  L R      I +  SG+  +   G ++ + +   +R ++     +EI
Sbjct: 13  EDQKEAAIVSHNLLLRGG---FILKLASGIYNYLPLGLRVIRKVSDIVREEMNKAGAQEI 69

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
               +    LW++SG W+ Y   +  +K   D     R F   P +      +    +KS
Sbjct: 70  LMAAIQPAELWKESGRWNDYGKELLRIKDRGD-----RDFVFGPTHEEVVTDIVRRFVKS 124

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIIS 413
           Y+++P+ L +  + +R+E      GLMR R F   DA+ F   E   +    K++    +
Sbjct: 125 YKQMPLNLYQIQTKFRDELRPRF-GLMRGREFIMKDAYSFDKDEAGMDVSYEKMNIAYHN 183

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL--DTIKNSSQDRINTGVLLGE 471
           I++  G     V+  T       S+     ++     ++  D+ + +S     T ++  E
Sbjct: 184 IFRRCGLAFRSVEADTGSIGGKDSEEFMVLSQTGEDEIVICDSCEYASNVERATSIVEDE 243

Query: 472 GAFYGPKFEYILKD-AIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK 517
                P  E  LK+ A         +        +F+A  +   +EK
Sbjct: 244 -----PAQEIELKEVATPGKQTIKDVCEFLGSDPKFSAKALVYKNEK 285



 Score = 78.3 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 24/161 (14%), Positives = 53/161 (32%), Gaps = 6/161 (3%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPL 548
           R  + G I       S+         + +  P  +     G        + +N      +
Sbjct: 403 RGIEVGHIFKLGQKYSKAMNATFLDENGRSVPYYMGCYGIGIGRTAQAAIEQNHDEYGII 462

Query: 549 WL---SPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
           W    +P +  + ++       VE+   +   +K     +  D R+E    K+ +  +  
Sbjct: 463 WPISIAPFEIEIVSLDTRNKELVEFCDILYEQMKKEGFDVLYDDRDERAGIKLNDMDLIG 522

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           IPI +I G K   +  + +        Q V   + +  + +
Sbjct: 523 IPIRVIVGKKAFEKGEVEVSLRRDRQKQSVEKDEVLEKVKE 563


>gi|78222566|ref|YP_384313.1| prolyl-tRNA synthetase [Geobacter metallireducens GS-15]
 gi|114152198|sp|Q39VY6|SYP_GEOMG RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|78193821|gb|ABB31588.1| Prolyl-tRNA synthetase [Geobacter metallireducens GS-15]
          Length = 570

 Score =  141 bits (355), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 52/252 (20%), Positives = 95/252 (37%), Gaps = 14/252 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  +        ++E   H+ + R   +  +A    G+  +   G +  + +   +R +
Sbjct: 4   SQYFIPTVKETPSDAEVVSHKLMLRAGMIRKLAA---GIYNYLPLGLRSIRKVEQIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P V    LWQ+S  W+ Y   +   K   D       F L P +     
Sbjct: 61  MNRAGAIELLMPSVQPAELWQESKRWEQYGKELLRFKDRKDA-----EFCLGPTHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNEC 404
            +    +KSYR+LP+ L +  S +R+E      GLMR R F   DA+ F  + E      
Sbjct: 116 DLVRREVKSYRQLPLNLYQVQSKFRDEIRPRF-GLMRGREFIMKDAYSFDVSSEAADTSY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALW---DDAENIMKGVLDTIKNSSQD 461
            K++     I++  G +   V+  T       S       D  E+ +         ++ +
Sbjct: 175 DKMYQAYRRIFQRCGLKFRAVEADTGSIGGSSSHEFMVLADSGEDAIVSCTACEYAANVE 234

Query: 462 RINTGVLLGEGA 473
           +    +   E A
Sbjct: 235 KAEARLFPSEHA 246



 Score = 84.8 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 65/163 (39%), Gaps = 12/163 (7%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN- 545
           R  + G +  +         A ++++  ++    +I    +G  I R +   IE      
Sbjct: 402 RGIEVGHVFKLGTKYSESLRATFLDADGKEQ---VIFMGCYGIGISRTVAACIEQNHDAD 458

Query: 546 ---LPLWLSPIQAIVTTITSSAVEY---AQEIANLLKSHHLSIETDFRNETINYKIREHS 599
               P+ ++P   I++ +++   E      E+   L +  + +  D R+E    K ++  
Sbjct: 459 GIIFPIPIAPFHCIISAVSTKDAEVVAACDELYRALTAVGVEVLFDDRDERPGSKFKDAD 518

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +  IP+ I+ G K  +E  + ++         + L +A+  + 
Sbjct: 519 LIGIPLRIVVGSKNLAEGKVELKSRKGGEVSLLPLAEAVETVK 561


>gi|88855365|ref|ZP_01130029.1| prolyl-tRNA synthetase [marine actinobacterium PHSC20C1]
 gi|88815272|gb|EAR25130.1| prolyl-tRNA synthetase [marine actinobacterium PHSC20C1]
          Length = 593

 Score =  141 bits (355), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 44/216 (20%), Positives = 85/216 (39%), Gaps = 11/216 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  +        ++E   HR L R   +        GV  W   G K+ + + + +R +
Sbjct: 6   SQLFVRTLREDPVDAEVASHRLLVRAGYIR---RQAPGVFAWLPLGLKVRRKIEAIIREE 62

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++    +E+  P +L +  ++ +G W  Y   +F +K   D       + L P +     
Sbjct: 63  LESFGAQEVLFPALLPREPYELTGRWTEYGDGIFRLKDRKDA-----DYLLAPTHEEVFT 117

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +      SY++LP+ L +    YR+E      GL+R R F+  D++ F   +   +   
Sbjct: 118 LLVKDLYSSYKDLPLSLYQIQDKYRDEARPR-AGLLRGREFSMKDSYSFDYTDAGLDLSY 176

Query: 406 KIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           + H      I+   G E ++V           S+  
Sbjct: 177 QQHRDAYERIFTRLGLEYVVVSADAGAMGGSKSEEF 212



 Score = 69.4 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 58/161 (36%), Gaps = 11/161 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN-FKGNL 546
           R  + G + Q+            ++ + +     M    +   + R +  + E    G  
Sbjct: 434 RGMEIGHVFQLGRKYAEVLGLKVLDENGKLVTVTMGSYGI--GVTRLMAAIAETTNDGKG 491

Query: 547 PLWL---SPIQAIVTTITSSAV--EYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSI 600
            LW    SP    +      AV  E A+ +   L+S  L +  D R + +   K  +  +
Sbjct: 492 LLWPKNISPFDVHIVAAGKDAVVFETAESLVTTLESAGLDVLFDDRVKVSPGVKFGDAEL 551

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
             +P I+I G ++A+   + +    +      ++ D    L
Sbjct: 552 LGVPKIVIVG-RDAANGMVEVWDRVTNERTSTAIADVGAAL 591


>gi|242278211|ref|YP_002990340.1| prolyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
 gi|259511591|sp|C6BYX7|SYP_DESAD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|242121105|gb|ACS78801.1| prolyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
          Length = 580

 Score =  141 bits (355), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 48/220 (21%), Positives = 84/220 (38%), Gaps = 11/220 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        E+E   H+ L R   +  +    SG+  +   G K    + + +R +
Sbjct: 4   SRYYIPTLKEDPSEAEVVSHKLLMRAGMIRKL---TSGIYNYLPLGLKSVNKVAAIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P V    LWQ++G WD Y   +  VK      +  R + L P +     
Sbjct: 61  MNRAGALEVLMPMVQPGDLWQETGRWDYYGKELLRVKD-----RHGRDYCLGPTHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    +KSY++LP+ L +  + +R+E      GLMR R F   DA+ F   E    E  
Sbjct: 116 DLVRGEVKSYKQLPLNLYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSFDKDEAGAEESY 174

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
           + +       +   G     V+  +       S      A
Sbjct: 175 RGMFEAYKKAFSRIGLNFRPVQADSGAIGGDFSHEFHVLA 214



 Score = 82.9 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 58/174 (33%), Gaps = 14/174 (8%)

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           G   E+     +G  ++ G+            A +++ +  K  P+++     G   R +
Sbjct: 400 GAAIEFTKGIEVGHVFKLGS-----KYSKSMEATFLDENG-KTQPMVMGCYGIGVS-RIV 452

Query: 536 GIMIENFKGN----LPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRN 588
              IE          P  ++P +  V ++     +  E A+E  N L    +    D R 
Sbjct: 453 ASAIEQNNDENGAIFPPTIAPFELCVISLGGKDEAVNEKAEEFYNELMEMGIDAAYDDRK 512

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           E    K  +  +   P+ ++ G K      +  +   +    ++ L        
Sbjct: 513 ERPGVKFADADLIGYPMQLVIGGKGLKNGIVEAKNRKTGEKIELPLEGFTEAFK 566


>gi|254413846|ref|ZP_05027615.1| prolyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420]
 gi|196179443|gb|EDX74438.1| prolyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420]
          Length = 596

 Score =  141 bits (355), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 50/227 (22%), Positives = 90/227 (39%), Gaps = 8/227 (3%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E   H+ L R   +  I   GSG+  +    W++ Q +   +R ++     +E   PQ
Sbjct: 12  EAEIPSHKLLVRAGYIRRI---GSGIYAYLPLMWRVLQKVSQIVREEMNATGAQECLLPQ 68

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW++SG WD+Y      +    D  +  R   L P +      +    ++SYR+L
Sbjct: 69  LQPSDLWRESGRWDTYTKAEGIMFALSD--RQNRELGLGPTHEEVITTIAREMIRSYRQL 126

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKD 417
           P+ L +  + +R+E      GLMR R F   D + F   E    +  + +     ++   
Sbjct: 127 PLHLYQIQTKFRDEIRPRF-GLMRGREFIMKDGYSFHVNEDSLKKTYQDMDQAYRNMISR 185

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            G     V+  +      GS      A+     +L T   +    + 
Sbjct: 186 CGLAFRAVEADSGAIGGSGSQEFMVLADIGEDEILYTEDGNYSANVE 232



 Score = 83.3 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 63/162 (38%), Gaps = 9/162 (5%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I Q+         A Y N   E  +P+ +     G        + +++  +  
Sbjct: 430 RGIEAGHIFQLGTKYSKAMGATYTNEAGE-ENPLYMGCYGVGVSRLAQAAVEQSYDKDGI 488

Query: 548 LW---LSPIQAIVTT---ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W   ++P  AI+T      +  +E A+ +   L    +    D RNE    K ++  + 
Sbjct: 489 IWAPAIAPYHAIITVPNISDTKQMEAAETLYQQLWQAGVETLLDDRNERAGVKFKDADLI 548

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            IP  I+ G +   +  + +    +  +Q++ L   +  L +
Sbjct: 549 GIPYRIVTG-RSLKQGKVEVAVRATHQSQELPLDQVVSTLKQ 589


>gi|269217138|ref|ZP_06160992.1| proline--tRNA ligase [Slackia exigua ATCC 700122]
 gi|269129275|gb|EEZ60360.1| proline--tRNA ligase [Slackia exigua ATCC 700122]
          Length = 569

 Score =  141 bits (354), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 44/215 (20%), Positives = 83/215 (38%), Gaps = 11/215 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++    + L R   L    ++ SG+  +   G ++   L S +R +
Sbjct: 2   SELYMPTIKEDPADADVTSAKLLYRAGMLR---KEASGLYSFLPLGMRVLNKLESIIREE 58

Query: 287 IK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +EI  P V    LW++SG W +Y   M  +       +    F L P +     
Sbjct: 59  MDSHGAQEILMPFVQSSDLWRESGRWGAYGEEMLRM-----ADRHGNEFCLGPTHEEVVT 113

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +  + L+SY++LP  L +    +R+E      GL+R R F   DA+ F    E +    
Sbjct: 114 DLVKNELRSYKDLPRNLYQIQLKFRDERRPRF-GLLRSREFIMKDAYSFDADREGLDASY 172

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDA 439
            ++     ++    G E  +V          G   
Sbjct: 173 ERMREAYENVCDRMGLEYRVVVADAGQIGGDGGTE 207



 Score = 80.2 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 24/162 (14%), Positives = 60/162 (37%), Gaps = 8/162 (4%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I  +         A ++++   +  P ++     G        + +    +  
Sbjct: 406 RGIEVGQIFKLGDKYSRAMGATFMDADGSEK-PFIMGCYGIGVSRAMAAAVEQRNDEHGI 464

Query: 548 LWLS---PIQAIVTTITSSAVE---YAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W +   P    V  ++    E    A+E+A  L    L +  D R+E    K  ++ + 
Sbjct: 465 IWPAAIAPAHVAVIPLSPKPDEVTAAAEELAGALADAGLEVVIDDRDERAGVKFNDNDLI 524

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             P+ ++ G +   E  + ++   +   + V+L   +  + +
Sbjct: 525 GWPVQVVVGKRGLKEGVVEVKDRATGEKESVALDQVLSAVER 566


>gi|157962683|ref|YP_001502717.1| prolyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
 gi|189083515|sp|A8H6J5|SYP_SHEPA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|157847683|gb|ABV88182.1| prolyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
          Length = 570

 Score =  141 bits (354), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 44/245 (17%), Positives = 88/245 (35%), Gaps = 11/245 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  L+        +E   H+ + R   +     + SG+  W   G ++ + + + +R +
Sbjct: 4   SKYLLSTQKETPANAEVVSHQLMLRAGMIR---RNASGLYSWLPTGLRVLRKIEAIVREE 60

Query: 287 IK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      EI  P V    LW ++G ++ +   +   +      +  R F L P +     
Sbjct: 61  MNKAGSVEILMPMVQPADLWVETGRFEKFGPELLRFQD-----RHNRDFVLGPTHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +    + SY++LP+ L +  + +R+E      G+MR R F   DA+ F    E M    
Sbjct: 116 DIVRKEVNSYKQLPLNLYQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHIDQETMDETY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
             +     +I    G     V   T       S      A +    +  + ++     I 
Sbjct: 175 EAMFQAYSNILTRLGLAFRPVMADTGSIGGSMSHEFHVLANSGEDLIAYSTESDYAANIE 234

Query: 465 TGVLL 469
                
Sbjct: 235 KCEAP 239



 Score = 85.6 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 24/167 (14%), Positives = 58/167 (34%), Gaps = 9/167 (5%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           A+ R  + G I Q+  N     NA  ++ + +    +++     G        + +N   
Sbjct: 403 ALLRGIEVGHIFQLGTNYSEAMNANVLDQNGKSQT-LLMGCYGVGVSRMVAAAIEQNNDD 461

Query: 545 NLPLWL---SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
              +W    +P    +  +    +    + A+++   L    + +  D R E       +
Sbjct: 462 RGIIWPEAIAPFTVGILPMNMHKSHRVKDIAEQLYQDLNDAGIEVMFDDRKERPGVMFAD 521

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
             +  IP +++ GD+         +   +   Q + L   +  L  +
Sbjct: 522 MELIGIPHVVVIGDRNIDNGMFEYKNRRTGEKQDIPLDQIVEFLKAQ 568


>gi|295111084|emb|CBL27834.1| prolyl-tRNA synthetase [Synergistetes bacterium SGP1]
          Length = 479

 Score =  141 bits (354), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 65/431 (15%), Positives = 151/431 (35%), Gaps = 63/431 (14%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
           + + +        + +  + +  +L   A     ++     G+ I++ +  Y     K  
Sbjct: 1   MARNITARSVDYSQWYLDVIKAAELADYAPVRGCMVI-RPTGYSIWENVQRYFDDAFKRT 59

Query: 290 DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
            +     P ++      +++ H + +      V  A     +   FA++P +      ++
Sbjct: 60  GHVNAYFPLLIPNSFLQKEAEHVEGFAPECAMVTHAGGEELE-EPFAVRPTSETVIGHMY 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN-ECLKI 407
           +  ++S+R+LPV + ++ +V R E    L   +R   F   + H     EQ    E L++
Sbjct: 119 SRWIQSWRDLPVLINQWCNVMRWEKRPRL--FLRTSEFLWQEGHTAHATEQEAREETLRM 176

Query: 408 HNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGV 467
             +   +                              E  +   + T + ++ +R     
Sbjct: 177 LEVYRKVM-----------------------------EEELALPVITGEKTAGERFP--- 204

Query: 468 LLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
               GA      E ++ DA  +  Q GT   +  N    F   + +   E          
Sbjct: 205 ----GAVATYTCEAMMSDA--KALQAGTSHFLGQNFARAFEIRFQDRDGELAT---CWTT 255

Query: 527 VFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSA-------VEYAQEIANLL 575
            +G   R IG +I    ++    LP  ++P++ ++  I+          +  A+E++  L
Sbjct: 256 SWGISTRLIGAIIMTHSDDDGLVLPPHIAPVKVVLLPISKDERQAEGVLLPMARELSGQL 315

Query: 576 KSH--HLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
                 L    D + +     +   H  + +P+ +  G+K+    ++ + R  +     +
Sbjct: 316 DEALGGLYTAVDTQFHMRPGDRFFTHLQRGVPLRLELGEKDVQSGTVRVVRRDTGEKADL 375

Query: 633 SLLDAIPILTK 643
           S    +P + K
Sbjct: 376 SRDALVPAVQK 386


>gi|253744932|gb|EET01065.1| Prolyl-tRNA synthetase [Giardia intestinalis ATCC 50581]
          Length = 534

 Score =  141 bits (354), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 73/425 (17%), Positives = 152/425 (35%), Gaps = 63/425 (14%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
              ++       +    +L        G + +   G+ +   ++     +       +  
Sbjct: 35  KTRDTFADWFDAIMDAAELVDRRYPVKGCVVFRPYGFFMENAIMKLCEEEYAKIGISQAL 94

Query: 296 TPQVLDQHLWQQSG-HWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
            P V+ +   ++ G H   + A  F V+       + R  AL+P +     ++F+  ++S
Sbjct: 95  FPTVIPESFLKKEGDHIKGFEAECFWVEKGGLQPLEER-LALRPTSETAIYSMFSKWVRS 153

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           Y++LP+++ +  +++R+E   +   L+RVR    ++AH      +     L  +  ++ I
Sbjct: 154 YKDLPLKIHQTCTIFRHETK-NTKPLIRVREIHWNEAHCCHATAEDAVSQLSDYWKVVDI 212

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
              F  E        R          WD                             GA 
Sbjct: 213 --IFSDELCFKGQKLRRV-------CWDKF--------------------------AGAD 237

Query: 475 YGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           Y    + ++    GR  Q   I  +     S F+  Y N  +E  HP +      G   R
Sbjct: 238 YSEVSDVVMPC--GRVLQTAGIHNLGQRFSSTFDILYANKANENVHPYL---TCAGISTR 292

Query: 534 FIG----IMIENFKGNLPLWLSPIQAIVTTITSS----------AVEYAQEIANLLK-SH 578
            +     I  ++    LP  ++PI  ++  I              +E   EIA+ LK   
Sbjct: 293 VLACALSIHGDSRGLVLPPLIAPIHVVIIPIGCGKKNNQESDRQVMEKVNEIADTLKLKL 352

Query: 579 HLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERS--IGIRRFGSTTTQKVSLL 635
            L +  D   ++++  K+  + +K +P+ I  G ++ +     +  R  G    + +S+ 
Sbjct: 353 GLRVSIDDDFSKSMGDKLYYYELKGVPLRIEIGQRDLANNQCIVVPRDMGKDKKKAISIT 412

Query: 636 DAIPI 640
           D + +
Sbjct: 413 DILKV 417


>gi|73662814|ref|YP_301595.1| prolyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|114152258|sp|Q49X48|SYP_STAS1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|72495329|dbj|BAE18650.1| prolyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 566

 Score =  141 bits (354), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 49/221 (22%), Positives = 92/221 (41%), Gaps = 11/221 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +         +E   HR L +      I +  SG+  +     ++   + + +R +
Sbjct: 4   SKVFIPTMKEVPAGAEALSHRLLLKAG---LIKQSTSGIYSYLPLAARVLNNIEAIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++  D  EI  P +    LW++SG W +Y   +  ++      ++ R FAL P +     
Sbjct: 61  MERIDAVEILMPALQQAELWEESGRWSAYGPELMRLQD-----RNGREFALGPTHEEVVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           ++    LKSY++LP+ L +  S YR+E      GL+R R F   DA+ F   E   +   
Sbjct: 116 SIVRDELKSYKQLPLTLFQIQSKYRDEKRPRF-GLLRGREFIMKDAYSFHADEDSLDASY 174

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
           + ++N    I+K  G     V   +       +      +E
Sbjct: 175 QDMYNAYGRIFKRVGINARPVVADSGAIGGSHTHEFMALSE 215



 Score = 78.7 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 25/151 (16%), Positives = 58/151 (38%), Gaps = 9/151 (5%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQA-- 555
           +        NA ++++   K  P+++     G       I+ +N   N  +W   +    
Sbjct: 413 LGTKYSESMNATFLDNQG-KAQPLLMGCYGIGVSRTLSAIVEQNNDENGIIWPKSVTPFD 471

Query: 556 ----IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
                +        E A ++   LK +   +  D R E    K  +  +  +P+ ++ G 
Sbjct: 472 LHLITINPKKDDQRELADQLYTQLKEN-YDVLYDDRKERAGVKFNDADLIGLPVRVVVG- 529

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           K A+E  + ++R  +  ++ V + + I  + 
Sbjct: 530 KNAAEGIVEVKRRDTGESEDVHVDNLINYVN 560


>gi|295836236|ref|ZP_06823169.1| proline-tRNA ligase [Streptomyces sp. SPB74]
 gi|295825921|gb|EFG64555.1| proline-tRNA ligase [Streptomyces sp. SPB74]
          Length = 563

 Score =  141 bits (354), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 58/325 (17%), Positives = 118/325 (36%), Gaps = 21/325 (6%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++E   H+ L R   +   A    GV  W   G K+   +   +R +
Sbjct: 8   SRLMVKTLRDDPADAETLSHKLLVRAGYVRRTAA---GVWSWLPLGKKVLDNISQIVREE 64

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E+  P +L +  ++ +G W+ Y   +F +K      +    + L P +     
Sbjct: 65  LDAIGAQEVLLPALLPREPYEATGRWEEYGDLLFRLKD-----RKGADYLLGPTHEEIFT 119

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            V      SY++LPV L +  + YR+E      G++R R F   D++ F T ++   E  
Sbjct: 120 QVVKDQCTSYKDLPVMLYQIQTKYRDEARPR-SGVLRGREFLMKDSYSFDTTDEGLAESY 178

Query: 406 KIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA---ENIMKGVLDTIKNSSQD 461
            +H      I+   G +  +V   +       S+     A   E+      +    ++ +
Sbjct: 179 ALHREAYRKIFARLGLDYRIVSAVSGAMGGSASEEFLAPAAAGEDTFADCPNCGFAANTE 238

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
            +       +G+ +GP  E    D      +     +     +      V    E     
Sbjct: 239 AVTFKGAAVDGSAHGPVEELDTPDT--PTIETLAEHLGVPASATLKNLLVKVDGE----- 291

Query: 522 MIHRAVFGSIERFIGIMIENFKGNL 546
           ++   V G  E  +G + E+    +
Sbjct: 292 IVAIGVPGDREVDLGKLGEHLAPAV 316



 Score = 90.2 bits (222), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 62/164 (37%), Gaps = 10/164 (6%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
            + R  + G I Q+       F    +  + +     M    +   + R +  + E    
Sbjct: 402 HLDRAIEIGHIFQLGRKYADTFQLDVLGQNGKPVRVTMGSYGI--GVSRAVAALAEQTAD 459

Query: 545 NLPL-WLSPIQA----IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREH 598
           +  L W + +      +V        E A E+A+ L +    +  D R   +   K  + 
Sbjct: 460 DKGLCWPAEVAPADVHVVAAGKVLQTELALEVADKLAAAGARVLVDDRAGVSPGVKFTDA 519

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +  +P  +I G + A+E  + ++   +   +++ + +A+  LT
Sbjct: 520 ELIGVPKTVIAGRR-AAEGIVELKDRRTGEREELPVEEAVARLT 562


>gi|220931621|ref|YP_002508529.1| prolyl-tRNA synthetase [Halothermothrix orenii H 168]
 gi|254782904|sp|B8CW65|SYP_HALOH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|219992931|gb|ACL69534.1| prolyl-tRNA synthetase [Halothermothrix orenii H 168]
          Length = 568

 Score =  141 bits (354), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 43/222 (19%), Positives = 91/222 (40%), Gaps = 11/222 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +   +       +E+E   H+ + R   + ++    +GV  +   G+++ + +   +R+ 
Sbjct: 4   SNLYIPTLKEVPKEAEVVSHQLMLRAGLIRNL---TAGVYSFLPLGYRVIKKIEGIIRKV 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           + +   +E+  P +    LW++SG W+ +   M   +      +  R + L P +     
Sbjct: 61  MDESGAQEVLMPVIHTSDLWKESGRWEKFGPLMIKFED-----RKGREYCLGPTHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +    ++SY++LP+ L +  +  R+E      GLMR R F   DA+ F    E +    
Sbjct: 116 DLVRDEIRSYKDLPLNLYQIQTKVRDEIRPRF-GLMRSREFIMKDAYSFDRDYEGLDKSY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
             ++     ++   G E   V+  T       S      AE+
Sbjct: 175 QVMYGAYTEVFNRCGLEVRAVEADTGAMGGKDSHEFMVLAES 216



 Score = 94.1 bits (232), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 62/151 (41%), Gaps = 6/151 (3%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL---SPIQ 554
           +         A Y++ +  K  P+++     G        + +N   +  +W    +P Q
Sbjct: 413 LGTKYSESMGATYLDENG-KEQPIVMGSYGIGVTRLVAAAIEQNHDEHGIIWPKAIAPYQ 471

Query: 555 AIVTTIT--SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
            I+  +       + A+E+   LK +++ +  D RNE    K  +  +  IP+ +  G +
Sbjct: 472 VIILPLGKGDEVNKRAEELYLELKDNNIEVLLDDRNERAGVKFNDADLIGIPLRLTIGSR 531

Query: 613 EASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              +  I  R  G+    ++S+ DAI  + K
Sbjct: 532 SLDKGVIEARVRGTGQDYEISVEDAIKDIKK 562


>gi|198277462|ref|ZP_03209993.1| hypothetical protein BACPLE_03684 [Bacteroides plebeius DSM 17135]
 gi|198269960|gb|EDY94230.1| hypothetical protein BACPLE_03684 [Bacteroides plebeius DSM 17135]
          Length = 554

 Score =  141 bits (354), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 49/231 (21%), Positives = 95/231 (41%), Gaps = 2/231 (0%)

Query: 11  DGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRS 69
           + S + FP  ++  D+    + ++    V+  +N KV  L   V     IE +       
Sbjct: 9   NNSTREFPEGSSLLDIYNGFNLAMPYGPVSAKVNNKVESLDFRVYYNKDIEFLDITSSSG 68

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           +     S   I+ +AV+ ++P+  +++   I  G++     ++    D++ +I++KMQEI
Sbjct: 69  MRTYVRSLFFILVKAVEELYPQGSISLEHPISKGYFCKLHIDRTIGLDDVQRIKQKMQEI 128

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
           IA D P+ +     E+   LFE +    K  +L++   +     Y+ G+  D      V 
Sbjct: 129 IAADIPYTRTESHTEEVVRLFEKRGMMDKARLLDTY-GQLYSYYYQLGDTVDCYYSSLVP 187

Query: 190 STGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           STG ++ F  +    G   R  S                 E+ Q  +   +
Sbjct: 188 STGYIRLFDIVKYYDGLLLRIPSRENPTKLEEVVKQEKMLEVFQEYHRWNQ 238


>gi|21224048|ref|NP_629827.1| prolyl-tRNA synthetase [Streptomyces coelicolor A3(2)]
 gi|256784874|ref|ZP_05523305.1| prolyl-tRNA synthetase [Streptomyces lividans TK24]
 gi|289768768|ref|ZP_06528146.1| prolyl-tRNA synthetase [Streptomyces lividans TK24]
 gi|15214317|sp|Q9KYR6|SYP_STRCO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|7801271|emb|CAB91135.1| prolyl tRNA synthetase [Streptomyces coelicolor A3(2)]
 gi|289698967|gb|EFD66396.1| prolyl-tRNA synthetase [Streptomyces lividans TK24]
          Length = 567

 Score =  141 bits (354), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 42/222 (18%), Positives = 86/222 (38%), Gaps = 11/222 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++           ++E   H+ L R   +   A    G+  W   G K+   +   +R +
Sbjct: 10  SKLMAKTLRDDPADAEVLSHKLLVRAGYVRRTAA---GLWSWLPLGKKVLGNIERIVREE 66

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E+  P +L +  ++ +G W  Y   +F ++      +    + L P +     
Sbjct: 67  MDAIGAQEVQLPALLPREPYEATGRWQEYGPELFRLQD-----RKGGDYLLGPTHEEIFT 121

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +      SY++LPV L +  + YR+E      G++R R F   D++ F   ++   E  
Sbjct: 122 LLVKDQASSYKDLPVILYQIQNKYRDEARPR-AGILRGREFLMKDSYSFDVADEGLAESY 180

Query: 406 KIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
            +H      I++  G +  +V  +        S+     AE 
Sbjct: 181 ALHRAAYQRIFERLGLDYRIVAATAGAMGGSKSEEFLAPAEA 222



 Score = 85.2 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 64/163 (39%), Gaps = 10/163 (6%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           + R  + G I Q+            +  + +     M    +   + R +  + E    +
Sbjct: 407 LDRAIEIGHIFQLGRKYADALKLDVLGQNGKPARVTMGSYGI--GVSRAVAALAEQHADD 464

Query: 546 LPL-W---LSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHS 599
             L W   ++P    V     +   E A E+++ L +  + +  D R   +   K  +  
Sbjct: 465 KGLVWSKEVAPADVHVVAAGKALQTELALEVSDKLAAAGVRVLVDDRAGVSPGVKFTDAE 524

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +  +P I++ G + + E  + ++   +   ++V++ +A+  LT
Sbjct: 525 LIGVPQILVAGRR-SGEGVVELKDRRTGEREEVTVEEALTRLT 566


>gi|332526531|ref|ZP_08402643.1| prolyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2]
 gi|332110799|gb|EGJ10976.1| prolyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2]
          Length = 582

 Score =  141 bits (354), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 55/326 (16%), Positives = 117/326 (35%), Gaps = 13/326 (3%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       ++E   H+ + R   +  +   G+G+  +   G ++ + + + +R 
Sbjct: 3   ASQTFISTLKEAPADAEIVSHKLMMRAGMIKRL---GAGIYNYMPMGLRVIRKVEAIIRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LW ++G + +Y   +  VK   D     R F ++P +    
Sbjct: 60  EMNRAGAVELLMPVVQPAELWMETGRFQAYGPELLRVKDRHD-----RDFVIQPTSEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    L+SY++LP       + +R+E      G+MR R FT  DA+ F   +    + 
Sbjct: 115 TDIARQELRSYKQLPRTFYHVQTKFRDERRPRF-GVMRGREFTMKDAYSFDRDKASALKS 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++    +I+  FG     V   T       S      A+     ++    +     I
Sbjct: 174 YDTMYRAYCAIFDRFGLTYRAVAADTGAIGGDASHEFQVIADTGEDAIVYCPTSDYAANI 233

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ--VDFNLPSRFNAFYVNSHSEKCHPV 521
                +   A      + + K        C  +       L +   +  + +  +     
Sbjct: 234 ELAEAVSLIAERAAPTQTMAKTPTPGKSTCEDVAALFGIALQNTVKSLVLATDEKDEAGD 293

Query: 522 MIHRAVFGSIERFIGIMIENFKGNLP 547
           ++   V+  + R    + E   G LP
Sbjct: 294 IVKTTVWLLLVRGDHALNEIKAGKLP 319



 Score = 85.6 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 60/176 (34%), Gaps = 12/176 (6%)

Query: 477 PKFEYILKDAIGRDWQCGTIQV--DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           P  +     AI R  + G +             A Y++ + +   P  +     G   R 
Sbjct: 404 PSPDGQGVLAIQRGIEVGHVFYLGTKKYSEPMGATYLDENGKPQ-PFEMGCYGIGVT-RI 461

Query: 535 IGIMIENFKGN----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDF 586
           +G  IE          P  ++P    V  I    ++     A ++ + L +  + +  D 
Sbjct: 462 LGAAIEQNHDERGIIWPDAIAPFTVAVCPIGYDRSADVKAAADQLHDELAALGIDVVLDD 521

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           R E       +  +  +P  ++  D+     ++ ++    T    V L +A+  + 
Sbjct: 522 RGERPGAMFADWELIGVPHRVVVSDRGLKAGTVEVQGRRETAAHTVPLAEAVAFVK 577


>gi|110801651|ref|YP_699687.1| prolyl-tRNA synthetase [Clostridium perfringens SM101]
 gi|123341520|sp|Q0SQC0|SYP_CLOPS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|110682152|gb|ABG85522.1| prolyl-tRNA synthetase [Clostridium perfringens SM101]
          Length = 570

 Score =  141 bits (354), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 54/249 (21%), Positives = 99/249 (39%), Gaps = 11/249 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +   +        E+E   H+ + R   +  +A    G+  +   G K+ + + + +R +
Sbjct: 4   SNMLVGTLREVPAEAEIESHKLMLRAGLMRKMAA---GIYNYMPLGLKVIENVKNIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           + +   +E     ++   LWQ+SG WD+Y A MF +K      +  R F L P +     
Sbjct: 61  MNNAGAQEFLASALIPAELWQESGRWDAYGAEMFRLKD-----RHNRDFCLGPTHEEVFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +  + +KSY++LP+ L +  + YR+E      G+MR R F   D + F    E +    
Sbjct: 116 DIVRNEIKSYKQLPLNLYQIQTKYRDERRPRF-GVMRSREFIMKDGYSFDKDQEGLDLAY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            K+    ++I+   G +   V   +      GS      +E     V+          I 
Sbjct: 175 EKMRKAYVNIFNRCGLDAKAVAADSGAIGGSGSAEFMVKSEVGEDDVVFCTACDYAANIE 234

Query: 465 TGVLLGEGA 473
                 E A
Sbjct: 235 KAPSTPEHA 243



 Score = 87.5 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 33/172 (19%), Positives = 60/172 (34%), Gaps = 9/172 (5%)

Query: 480 EYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           E   +  I R  + G I  +         A +++    K  P ++     G       I+
Sbjct: 393 ECGKEITISRGTEVGHIFKLGTKYSESMGATFIDEDG-KAKPFIMGCYGIGVTRTVASII 451

Query: 539 IENFKGNLPLWL---SPIQAIVTTITSSAVEYA---QEIANLLKSHHLSIETDFRNETIN 592
            ++   N  +W    +P    V        E A   +EI N L+   +    D R E   
Sbjct: 452 EQHNDENGIIWPLEVAPYHVSVIPANVKNEEQATKAEEIYNELRKMGVEALLDDRKERAG 511

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            K ++  +  IP+ I  G K   E  +  +       + +S+ +    + KE
Sbjct: 512 VKFKDSELMGIPMRITVG-KMIGEGQVEFKLRNGGEVETLSIEEVYNRVRKE 562


>gi|110799310|ref|YP_697117.1| prolyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
 gi|168211250|ref|ZP_02636875.1| prolyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626]
 gi|123049576|sp|Q0TMM3|SYP_CLOP1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|110673957|gb|ABG82944.1| prolyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
 gi|170710790|gb|EDT22972.1| prolyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626]
          Length = 570

 Score =  141 bits (354), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 54/249 (21%), Positives = 99/249 (39%), Gaps = 11/249 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +   +        E+E   H+ + R   +  +A    G+  +   G K+ + + + +R +
Sbjct: 4   SNMLVGTLREVPAEAEIESHKLMLRAGLMRKMAA---GIYNYMPLGLKVIENVKNIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           + +   +E     ++   LWQ+SG WD+Y A MF +K      +  R F L P +     
Sbjct: 61  MNNAGAQEFLASALIPAELWQESGRWDAYGAEMFRLKD-----RHNRDFCLGPTHEEVFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +  + +KSY++LP+ L +  + YR+E      G+MR R F   D + F    E +    
Sbjct: 116 DIVRNEIKSYKQLPLNLYQIQTKYRDERRPRF-GVMRSREFIMKDGYSFDKDQEGLDLAY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            K+    ++I+   G +   V   +      GS      +E     V+          I 
Sbjct: 175 EKMRKAYVNIFNRCGLDAKAVAADSGAIGGSGSAEFMVKSEVGEDDVVFCTACDYAANIE 234

Query: 465 TGVLLGEGA 473
                 E A
Sbjct: 235 KAPSTPEHA 243



 Score = 86.8 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 32/172 (18%), Positives = 60/172 (34%), Gaps = 9/172 (5%)

Query: 480 EYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           E   +  I R  + G I  +         A +++    K  P ++     G       I+
Sbjct: 393 ECGKEITISRGTEVGHIFKLGTKYSESMGATFIDEDG-KAKPFIMGCYGIGVTRTVASII 451

Query: 539 IENFKGNLPLWL---SPIQAIVTTITSSAVEYA---QEIANLLKSHHLSIETDFRNETIN 592
            ++   N  +W    +P    V        E A   +EI N L+   +    D R E   
Sbjct: 452 EQHNDENGIIWPLEVAPYHVSVIPANVKNEEQATKAEEIYNELRKMGVEALLDDRKERAG 511

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            K ++  +  IP+ I  G K   E  +  +       + +S+ +    + +E
Sbjct: 512 VKFKDSELMGIPMRITVG-KMIGEGQVEFKLRNGGEVETLSIEEVYNRVREE 562


>gi|71894504|ref|YP_278612.1| prolyl-tRNA synthetase [Mycoplasma synoviae 53]
 gi|114152218|sp|Q4A5S0|SYP_MYCS5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|71851292|gb|AAZ43901.1| prolyl-tRNA synthetase [Mycoplasma synoviae 53]
          Length = 482

 Score =  141 bits (354), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 67/385 (17%), Positives = 133/385 (34%), Gaps = 55/385 (14%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAV 321
           G I +    + I++ +   +    K    E I  P  + + L++ +  H   +   +  V
Sbjct: 35  GTIIYKPNSYGIWENIQKTLNEVFKKHGVENIYAPLFIPESLFKIEKEHVQGFNPELATV 94

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
               +  K      ++P +      +F   + SY +LP    ++ +V R E        +
Sbjct: 95  TQVGNK-KLSEKLIVRPTSEVIFANLFKEDINSYNDLPKIYNQWANVVRWEK--VTKPFL 151

Query: 382 RVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           R R F   + H    + E+  +  +K+                                 
Sbjct: 152 RTREFLWQEGHTSHSSAEEARSFTVKMIKEY----------------------------- 182

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDF 500
               E  +K  L     S +   N       GA      E ++KD  G+  Q GT     
Sbjct: 183 ----EKFLKNYLAIPVVSGKKTCNEKFA---GAVSTYTVEAMMKD--GKALQTGTSHYLG 233

Query: 501 NLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAI 556
              SR   + ++  ++      +++  +G   R +G +I     N    +P  ++PI+  
Sbjct: 234 QKFSR--PYGISFKNKNNEEDFVYQTSWGVSTRLLGAIIMVHGDNRGVIIPPKIAPIKVD 291

Query: 557 VTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
           +  I         + A +I   L    LS+  D  N++  +K  +  I+ +P+ I  G +
Sbjct: 292 ILEILADKNPEVSKVANKIYKELSKK-LSVRLDASNKSPGFKASQSEIEGVPLRIEVGPR 350

Query: 613 EASERSIGIRRFGSTTTQKVSLLDA 637
           +     +   R  +    KV L + 
Sbjct: 351 DLENNCVTFVRRDTLEKTKVDLENV 375


>gi|114331243|ref|YP_747465.1| prolyl-tRNA synthetase [Nitrosomonas eutropha C91]
 gi|123026746|sp|Q0AGN2|SYP_NITEC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|114308257|gb|ABI59500.1| prolyl-tRNA synthetase [Nitrosomonas eutropha C91]
          Length = 568

 Score =  141 bits (354), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 54/248 (21%), Positives = 93/248 (37%), Gaps = 11/248 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  L+       E+E   HR + R   +  +   GSG+  W   G +I   +   +R +
Sbjct: 4   SQFFLSTLKEAPAEAELASHRLMLRAGLIKRL---GSGLYTWMPLGLRILHKIEHIIREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P V    LWQ+SG WD +   M  ++      +    F   P +    V
Sbjct: 61  MNSSGALELLMPAVHPAELWQESGRWDVFGPQMLKIQD-----RHQHDFCFGPTHEEVIV 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    +KSYR+LP+   +  + +R+E      G+MR R F   DA+ F        +  
Sbjct: 116 DIARREIKSYRQLPINFYQIQTKFRDEIRPRF-GVMRAREFIMKDAYSFHADLGSLEQTY 174

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
           + +H     I+   G +   V   T      GS      A++    +     +     I 
Sbjct: 175 QLMHETYSRIFTRIGLKFRAVAADTGAIGGSGSHEFHVLADSGEDAIAFCPDSDYAANIE 234

Query: 465 TGVLLGEG 472
               +  G
Sbjct: 235 LAEAISHG 242



 Score = 78.3 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 26/165 (15%), Positives = 63/165 (38%), Gaps = 13/165 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENF---- 542
           R  + G I Q+      +  A Y++   +     ++    +G  + R +   IE      
Sbjct: 403 RGIEVGHIFQLRTKYSEKMKATYLDESGQTQ---ILEMGCYGIGVSRIVAAAIEQNCDER 459

Query: 543 KGNLPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
               P+ ++P Q  +  I            +++    ++  + +  D R E       + 
Sbjct: 460 GIIFPVAIAPFQLSIIPIGYHKNLQIQAEVEKLYRACRAAGIEVLLDDREERPGVMFADQ 519

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +  IP  I+ G++   +  +  +     T++ +SL + IP++ +
Sbjct: 520 ELIGIPHRIVIGERNLRDGMVEYQGRLDKTSRLLSLQEVIPVIRE 564


>gi|289674658|ref|ZP_06495548.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. syringae FF5]
          Length = 172

 Score =  141 bits (354), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 41/178 (23%), Positives = 75/178 (42%), Gaps = 10/178 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L        ++    H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQFLLATQKETPSDAVVVSHQLMLRAGMIRKLA---SGLYTWLPMGLRVLRKVEAIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      EI  P +    LWQ+SG W+ Y   +  +       +  R F L P +    
Sbjct: 60  EMDAAGALEILMPGIQPAELWQESGRWEQYGPELMRLVD-----RHNREFCLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN 402
             +  + L SY++LP+ L +  + +R+E      GLMR R F   DA+ F    +   
Sbjct: 115 TDLARNELNSYKQLPINLYQIQTKFRDEIRPRF-GLMRGREFVMKDAYSFHADHESLQ 171


>gi|281411733|ref|YP_003345812.1| prolyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
 gi|281372836|gb|ADA66398.1| prolyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
          Length = 577

 Score =  141 bits (354), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 54/235 (22%), Positives = 92/235 (39%), Gaps = 11/235 (4%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
            + E   H  L R   +  +A    G+  +   G ++   + + +R ++     +EI  P
Sbjct: 16  SDVETVSHEYLLRGGFIRKVAA---GIYTYLPLGRRVLLKIENIVREEMNRIGAQEILMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW+QSG WD Y   M  +K      +  R F L P +      +  + L+SY++
Sbjct: 73  ILQPAELWKQSGRWDDYGPEMMKLKD-----RHERDFTLGPTHEEIVTDLVKNELRSYKQ 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH-NLIISIYK 416
           LP+ L +  + YR+E      GL+R R F   DA+ F    +  +E  +        I +
Sbjct: 128 LPLTLYQIANKYRDEIRPRF-GLLRAREFIMKDAYSFHASWESLDETYEQFKKAYSRIME 186

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
             G   ++++  T       S      A+     VL   K   Q         GE
Sbjct: 187 RLGVRYMIIEAETGTIGGNASHEFVVPAKIGETNVLFCEKCGYQASDEKAEYKGE 241



 Score = 71.4 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 28/169 (16%), Positives = 66/169 (39%), Gaps = 17/169 (10%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF----KGNLPLWLSPI 553
           +         A++++ + E   P ++    +G   R +  ++E+F        PL ++P 
Sbjct: 412 LGTKYSEAMKAYFMDENGEMK-PFIMGCYGWGVS-RTMAAVVEHFHDENGMIWPLSIAPY 469

Query: 554 QAIV---TTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
             +V       +   +  + I  +L      +  D R  +  +K ++  +   PI I  G
Sbjct: 470 TVVVDILNMNDAEQKQIGELIYQVLSEKGEEVVLDDREVSPGFKFKDADLIGFPIRINVG 529

Query: 611 DKEASERSIGIRRFGSTTTQKV-------SLLDAIPILTKESLPPDCQK 652
            +   E  + +++  S    KV       +LL+ +  + +E  P +  +
Sbjct: 530 -RSLKEGVVELKKRYSKELVKVNIKNGFGALLETLEKMKREYDPKEAAR 577


>gi|326566943|gb|EGE17081.1| prolyl-tRNA synthetase [Moraxella catarrhalis 12P80B1]
          Length = 572

 Score =  141 bits (354), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 49/220 (22%), Positives = 92/220 (41%), Gaps = 10/220 (4%)

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLFH--IAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
            + +Q+++   +    D    + ++ L    I +  SG+  W   G ++ + +   +R +
Sbjct: 1   MKASQFIFATLKETPNDADIASSQLMLRAGLIRKLASGLYVWMPMGLRVLKRVERIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++  D +E+  P      LW +SG W+ Y A +   K      +  R F L P +     
Sbjct: 61  MEKIDSQELLMPVTQPGELWHESGRWEDYGAELLRFKD-----RHSRDFVLGPTHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +  + LKSY++LP+   +  + +R+E      G+MR R FT  DA+ F    E + N  
Sbjct: 116 DIARNELKSYKQLPITFYQIQTKFRDEIRPRF-GVMRAREFTMKDAYSFHIDKESLANTY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
             +++    I+   G     V+  T       S      A
Sbjct: 175 QDMYDAYNRIFTRLGLNFRAVQADTGSIGGFASHEFHVLA 214



 Score = 82.1 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 34/171 (19%), Positives = 61/171 (35%), Gaps = 18/171 (10%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NF 542
           +I R  + G I Q+        N   +    +   PV +    +G  + R I   IE N 
Sbjct: 405 SIKRGIEVGHIFQLGDKYSKALNCSVLGKEGK---PVTLMMGCYGIGVSRIIAAAIEQNH 461

Query: 543 KGNLPLWLSPIQ---------AIVTTITS---SAVEYAQEIANLLKSHHLSIETDFRNET 590
             N  +W  P             +  + S    A   AQ +   LK+  +++  D R+E 
Sbjct: 462 DDNGIIWAEPEDKADSIAPFYVAIVPMKSKDGDAEAKAQSLYQTLKARGINVLLDDRDER 521

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
              K  +  +  IP  I+   +  +E         +   Q +SL + + + 
Sbjct: 522 AGVKFADLELIGIPHRIVVSQRNLAENKYEYTNRATGDQQMLSLDELLALF 572


>gi|290968110|ref|ZP_06559655.1| proline--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
 gi|290781785|gb|EFD94368.1| proline--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
          Length = 575

 Score =  141 bits (354), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 46/241 (19%), Positives = 90/241 (37%), Gaps = 11/241 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++           E+E   H+ + +   +    ++ SG   +     +    +   +R 
Sbjct: 3   ASKLYCPTLRDDPAEAEVASHKYMLKAGMIR---KNASGFYSFLPLARRSVLKIEKIIRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +EI  P V    +WQ+SG WD Y   MF +       +    + L P +    
Sbjct: 60  EMDKTGAQEIMMPIVQPAEIWQESGRWDVYGKEMFKL-----ADRHGNEYCLAPTHEELI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
             +  + L+SY++LPV L +  + YR+E      GLMR R F   D++ F T  E +   
Sbjct: 115 TTLVRNELRSYKQLPVNLYQIQNKYRDEIRPRF-GLMRSREFVMQDSYSFDTDQEGLEKS 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   G +   V   +       S      A +    ++   + +    +
Sbjct: 174 YQAMYEAYSRIFTRCGLQYRTVLADSGQIGGKHSHEFMALAASGEADIVTCTQCAYAADV 233

Query: 464 N 464
            
Sbjct: 234 E 234



 Score = 81.8 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 62/162 (38%), Gaps = 10/162 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G + Q+         A +++    K  P ++     G   R +   IE +     
Sbjct: 405 RGIEVGQVFQLGTKYSEALQASFLDKDG-KAKPFVMGCYGIGVT-RTMAAAIEQYHDERG 462

Query: 546 --LPLWLSPIQAIVTTITSS---AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              P+ ++P +A++  +       V  A+E+   L +    I  D R E    K  +  +
Sbjct: 463 ILWPVAIAPYEAVILPLNMKDEVMVTAARELYTQLSADSSEIVLDDRPERAGVKFNDADL 522

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
              P+ I+ G    ++ ++ I+   +   + V +  A+  + 
Sbjct: 523 IGYPVQIVVGKDTKTKGTVEIKVRRTGAKEAVPVRTAVGRVQ 564


>gi|229820980|ref|YP_002882506.1| prolyl-tRNA synthetase [Beutenbergia cavernae DSM 12333]
 gi|229566893|gb|ACQ80744.1| prolyl-tRNA synthetase [Beutenbergia cavernae DSM 12333]
          Length = 586

 Score =  141 bits (354), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 49/262 (18%), Positives = 96/262 (36%), Gaps = 24/262 (9%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   HR L R   +        G+  W   G ++   + + +R ++     +E++ P 
Sbjct: 15  DAEVDSHRLLVRAGYIR---RAAPGIYTWLPLGLRVLARVEAIVREEMDAAGAQEVHFPA 71

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++ SG W +Y   +F +K   +       + L P +      +      SY++L
Sbjct: 72  LLPREPYEASGRWTTYGQGIFRLKDRREG-----DYLLAPTHEEMFTLLVKDLYSSYKDL 126

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH-NLIISIYKD 417
           P+ L +  + YR+E      GL+R R F   DA+ F      F        +    I+  
Sbjct: 127 PLTLYQIQTKYRDEARPR-AGLLRGREFIMKDAYSFDVDLARFERSYDAQRHAYQRIFDR 185

Query: 418 FGFEKIMVKLSTRPEKRVGSDAL----------WDDAENIMKGVLDTIKNSSQDRINTGV 467
            G E ++VK S+       S+            +  +       ++ +     + I    
Sbjct: 186 LGLEYVIVKASSGLMGGTRSEEFLSPCAIGEDTFVRSPGGYAANVEAVTTPVPEAIPYED 245

Query: 468 LLG---EGAFYGPKFEYILKDA 486
                 E     P  E ++  A
Sbjct: 246 APPAHVEDTPDTPTIETLVAHA 267



 Score = 62.9 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/163 (14%), Positives = 55/163 (33%), Gaps = 11/163 (6%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G I  +            ++ + +   P M    V   + R +  + E       
Sbjct: 419 RGIEIGHIFDLGTTFSDALGLTVLDENGKAIVPTMGSYGV--GVSRAVAALAETHHDERG 476

Query: 546 --LPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIET---DFRNETINYKIREHSI 600
              P+ ++P Q  +         +A             I+    D R  +   K  +  +
Sbjct: 477 LTWPVHVAPAQVHIVATGKDDAVFAAAEELGAALTARRIDVLLDDRRKVSAGVKFADGEL 536

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             +P+I++ G +  ++ +I +R   S   + V +  A   + +
Sbjct: 537 LGMPVIVVVG-RGLADGTIEVRLRASDLREDVEVARAADHVAE 578


>gi|207109770|ref|ZP_03243932.1| threonyl-tRNA synthetase [Helicobacter pylori HPKX_438_CA4C1]
          Length = 145

 Score =  141 bits (354), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 42/136 (30%), Positives = 73/136 (53%)

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAV 565
           F   + N  +    PVMIHRA+ GS ERFI I+ E+F GN P +++P Q  +  I     
Sbjct: 1   FKLAFTNERNHAEQPVMIHRAILGSFERFIAILSEHFGGNFPFFVAPTQIALIPINEEHH 60

Query: 566 EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
            +A ++   LK   + +E   +N+++N K+R    +KIP+I++ G++E     + IR   
Sbjct: 61  VFALKLKEALKKRDIFVEVLDKNDSLNKKVRLAEKQKIPMILVLGNEEMETEILSIRDRE 120

Query: 626 STTTQKVSLLDAIPIL 641
                K+ L + + ++
Sbjct: 121 KQAQYKMPLKEFLNMV 136


>gi|333029615|ref|ZP_08457676.1| phosphoribulokinase/uridine kinase [Bacteroides coprosuis DSM
           18011]
 gi|332740212|gb|EGJ70694.1| phosphoribulokinase/uridine kinase [Bacteroides coprosuis DSM
           18011]
          Length = 557

 Score =  141 bits (354), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 39/217 (17%), Positives = 95/217 (43%), Gaps = 3/217 (1%)

Query: 1   MPSDIKLTFPDGSI-KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-S 58
           M   +++   + +I ++FP+ +T  ++ +        + V+  +N ++  L   V     
Sbjct: 1   MKQSVQIYCKNNNIYRDFPIGSTLLEIYKGFKLDFKHQVVSAKVNNRIEGLRYKVYNNKD 60

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           +E +   D  ++     S   ++ +A + ++P  ++ +   +  G++ + +  +  + ++
Sbjct: 61  VEFLDVRDSSAMRTYVRSLCFVLYKAARELFPSSKLYVEHPVSKGYFCNLEIGREITLED 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           +  ++K+MQEII  D P+ ++    + A +LF  +    KV +LE+         Y  G 
Sbjct: 121 IDLLKKRMQEIIDADIPYYRKECRTKDAMKLFAEEGMTDKVRLLET-SGSIYTYYYELGG 179

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRP 215
             D   G  + S+G +  F  +    G   R  +   
Sbjct: 180 TIDYYYGNLLPSSGFINVFDIMKYYDGILLRIPNKNN 216


>gi|251797797|ref|YP_003012528.1| prolyl-tRNA synthetase [Paenibacillus sp. JDR-2]
 gi|247545423|gb|ACT02442.1| prolyl-tRNA synthetase [Paenibacillus sp. JDR-2]
          Length = 571

 Score =  141 bits (354), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 52/251 (20%), Positives = 100/251 (39%), Gaps = 15/251 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  L        E+E   H+ + R   +  +A    G+  +   G  + + L   +R +
Sbjct: 4   SQLLLPTLREAPSEAEAVSHQLMLRAGLIRQLAA---GIYTYLPAGRLVLRKLEKIIREE 60

Query: 287 I-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E+  P +    LW+QSG ++ Y   +  +K   D     R FAL P +     
Sbjct: 61  MDNAGCQEVFMPAMQPADLWRQSGRYEKYGPELVRLKDRHD-----REFALGPTHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +    + SYR+LPV L +  + +R+E     +GL+R R F   DA+ F    E +    
Sbjct: 116 DLVRGEVNSYRQLPVTLYQIQTKFRDEKRPR-YGLLRGREFMMKDAYSFDADWEGLNESY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVK-LSTRPEKRVGSDALWDDA---ENIMKGVLDTIKNSSQ 460
            ++++    I+   G     V+  +       G+      A   E+ +         ++ 
Sbjct: 175 QRMYDAYHRIFSRCGLHFRPVEADAGTIGGEGGTHEFMALADIGEDTIAACDHCRYAANL 234

Query: 461 DRINTGVLLGE 471
           ++    +  GE
Sbjct: 235 EKAGYRIPEGE 245



 Score = 84.4 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 27/152 (17%), Positives = 65/152 (42%), Gaps = 10/152 (6%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG----NLPLWLSPI 553
           +         A Y+++   +  P+++     G I R +  ++E          PL L+P 
Sbjct: 418 LGTKYSEVMQANYLDATGSEK-PIIMGCYGIG-ISRVMSAVVEQHHDEQGIRWPLELAPY 475

Query: 554 QAIVTTITSS---AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           Q  V  +++     ++ A ++   L S    +  D R+E    K ++  +  IP+ I+ G
Sbjct: 476 QVHVVPVSAKDGQQMDVAGKLYRELMSAGFEVLLDDRDERPGVKFKDSDLIGIPVRIVVG 535

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            + A++  + ++        + +  +A+ ++T
Sbjct: 536 RQ-AADGVVELKYRNEGEVLQATTEEALGLVT 566


>gi|326572669|gb|EGE22658.1| prolyl-tRNA synthetase [Moraxella catarrhalis CO72]
          Length = 572

 Score =  141 bits (354), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 49/220 (22%), Positives = 92/220 (41%), Gaps = 10/220 (4%)

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLFH--IAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
            + +Q+++   +    D    + ++ L    I +  SG+  W   G ++ + +   +R +
Sbjct: 1   MKASQFIFATLKETPNDADIASSQLMLRAGLIRKLASGLYVWMPMGLRVLKRVERIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++  D +E+  P      LW +SG W+ Y A +   K      +  R F L P +     
Sbjct: 61  MEKIDSQELLMPVTQPGELWHESGRWEDYGAELLRFKD-----RHSRDFVLGPTHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +  + LKSY++LP+   +  + +R+E      G+MR R FT  DA+ F    E + N  
Sbjct: 116 DIARNELKSYKQLPITFYQIQTKFRDEIRPRF-GVMRAREFTMKDAYSFHIDKESLANTY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
             +++    I+   G     V+  T       S      A
Sbjct: 175 QDMYDAYNRIFTRLGLNFRAVQADTGSIGGFASHEFHVLA 214



 Score = 82.1 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 34/171 (19%), Positives = 61/171 (35%), Gaps = 18/171 (10%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NF 542
           +I R  + G I Q+        N   +    +   PV +    +G  + R I   IE N 
Sbjct: 405 SIKRGIEVGHIFQLGDKYSKALNCSVLGKEGK---PVTLMMGCYGIGVSRIIAAAIEQNH 461

Query: 543 KGNLPLWLSPIQ---------AIVTTITS---SAVEYAQEIANLLKSHHLSIETDFRNET 590
             N  +W  P             +  + S    A   AQ +   LK+  +++  D R+E 
Sbjct: 462 DDNGIIWAEPEDKADSIAPFYVAIVPMKSKDGDAEAKAQSLYQTLKARGINVLLDDRDER 521

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
              K  +  +  IP  I+   +  +E         +   Q +SL + + + 
Sbjct: 522 AGVKFADLELIGIPHRIVVSQRNLAENKYEYTNRATGDQQMLSLDELLALF 572


>gi|296113641|ref|YP_003627579.1| prolyl-tRNA synthetase [Moraxella catarrhalis RH4]
 gi|295921335|gb|ADG61686.1| prolyl-tRNA synthetase [Moraxella catarrhalis RH4]
 gi|326568678|gb|EGE18749.1| prolyl-tRNA synthetase [Moraxella catarrhalis BC7]
          Length = 572

 Score =  141 bits (354), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 49/220 (22%), Positives = 92/220 (41%), Gaps = 10/220 (4%)

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLFH--IAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
            + +Q+++   +    D    + ++ L    I +  SG+  W   G ++ + +   +R +
Sbjct: 1   MKASQFIFATLKETPNDADIASSQLMLRAGLIRKLASGLYVWMPMGLRVLKRVERIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++  D +E+  P      LW +SG W+ Y A +   K      +  R F L P +     
Sbjct: 61  MEKIDSQELLMPVTQPGELWHESGRWEDYGAELLRFKD-----RHSRDFVLGPTHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +  + LKSY++LP+   +  + +R+E      G+MR R FT  DA+ F    E + N  
Sbjct: 116 DIARNELKSYKQLPITFYQIQTKFRDEIRPRF-GVMRAREFTMKDAYSFHIDKESLANTY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
             +++    I+   G     V+  T       S      A
Sbjct: 175 QDMYDAYNRIFTRLGLNFRAVQADTGSIGGFASHEFHVLA 214



 Score = 82.1 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 34/171 (19%), Positives = 61/171 (35%), Gaps = 18/171 (10%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NF 542
           +I R  + G I Q+        N   +    +   PV +    +G  + R I   IE N 
Sbjct: 405 SIKRGIEVGHIFQLGDKYSKALNCSVLGKEGK---PVTLMMGCYGIGVSRIIAAAIEQNH 461

Query: 543 KGNLPLWLSPIQ---------AIVTTITS---SAVEYAQEIANLLKSHHLSIETDFRNET 590
             N  +W  P             +  + S    A   AQ +   LK+  +++  D R+E 
Sbjct: 462 DDNGIIWAEPEDKADSIAPFYVAIVPMKSKDGDAEAKAQSLYQTLKARGINVLLDDRDER 521

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
              K  +  +  IP  I+   +  +E         +   Q +SL + + + 
Sbjct: 522 AGVKFADLELIGIPHRIVVSQRNLAENKYEYTNRATGDQQMLSLDELLALF 572


>gi|189205755|ref|XP_001939212.1| prolyl-tRNA synthetase 2 [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187975305|gb|EDU41931.1| prolyl-tRNA synthetase 2 [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 562

 Score =  141 bits (354), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 71/423 (16%), Positives = 147/423 (34%), Gaps = 59/423 (13%)

Query: 252 EMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSG 309
                    D +G        + I++ +  +   KIK         P  +     + +  
Sbjct: 67  TKGQMISYYDVAGCYILEPASYAIWENIQKWFDAKIKTLKVRNAYFPIFISADNLEREKE 126

Query: 310 HWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVY 369
           H + + A +  V     +  +    A++P +       F   ++S+R+LP++L ++ SV 
Sbjct: 127 HVEGFAAEVAWVTKGGKSDLEK-PIAVRPTSETAMYPYFARKIQSHRDLPLKLNQWNSVV 185

Query: 370 RNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLS 428
           R E    +   +R R F   + H    T+E+   E L+I +    +++      ++  + 
Sbjct: 186 RWEFKHPM-PFIRTREFLWQEGHTAHLTREEASAEVLQILDWYSDVFQKLLAVPVVKGMK 244

Query: 429 TRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIG 488
           T  EK  G+D             ++    ++   +        G  +   F+  ++D   
Sbjct: 245 TINEKFPGADYTTT---------VEGFIPATGRGVQAATSHCLGQHFSKMFDIKVEDPTA 295

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPL 548
           ++                          K   V + +  +G   R IG+MI     N  L
Sbjct: 296 KEA------------------------GKSEHVHVWQNSWGLTTRSIGVMILTHGDNRGL 331

Query: 549 WLSPIQA--------------IVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINY 593
            + P  A              +            ++IA+ L    + +ETD+R   +  +
Sbjct: 332 VIPPRVAEVQVVVIPVGVTAKMSAEAKEELYSKVKKIADDLIEAGVRVETDYREGYSPGW 391

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT----QKVSLLDAIPILTK--ESLP 647
           K  +  +K IP+ I  G K+A +  +   R            +S+ + +  + K  E + 
Sbjct: 392 KFNDWELKGIPLRIEFGPKDAEKGVVTTSRRDIDDKDAARGTISVDNLVEEVPKLLEQIQ 451

Query: 648 PDC 650
            D 
Sbjct: 452 EDM 454


>gi|170727590|ref|YP_001761616.1| prolyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
 gi|226701338|sp|B1KNR3|SYP_SHEWM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|169812937|gb|ACA87521.1| prolyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
          Length = 569

 Score =  141 bits (354), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 44/245 (17%), Positives = 88/245 (35%), Gaps = 11/245 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  L+       ++E   H+ + R   +     + SG+  W   G ++ + + + +R +
Sbjct: 4   SKYLLSTQKETPADAEVISHQLMLRAGMIR---RNASGLYSWLPTGLRVLRKIEAIVREE 60

Query: 287 IK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      EI  P V    LW ++G ++ +   +   +      +  R F L P +     
Sbjct: 61  MNKAGSVEILMPMVQPADLWVETGRFEKFGPELLRFQD-----RHNRDFVLGPTHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +    + SY++LP+ L +  + +R+E      G+MR R F   DA+ F    E M    
Sbjct: 116 DIVRKEVNSYKQLPLNLFQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHLDQETMDETY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
             +     +I    G     V   T       S      A +    +  +  +     I 
Sbjct: 175 ESMFQAYSNILTRLGLAFRPVIADTGSIGGSMSHEFHVLANSGEDLIAYSTGSDYAANIE 234

Query: 465 TGVLL 469
                
Sbjct: 235 KAESP 239



 Score = 81.4 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 23/165 (13%), Positives = 58/165 (35%), Gaps = 9/165 (5%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           A+ R  + G I Q+  N     NA  ++ + +    +++     G        + +N   
Sbjct: 403 ALLRGIEVGHIFQLGKNYSEAMNANVLDQNGKAQT-LLMGCYGVGVSRMVAAAIEQNHDD 461

Query: 545 NLPLWL---SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
              +W    +P +  +  +    +    + A+++   L    + +  D R E       +
Sbjct: 462 RGIIWPDAIAPFRVGILPMNMHKSHRVQDMAEQLYKDLSDAGIEVLFDDRKERAGVMFAD 521

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             +  +P +++ GD+         +   +   Q+V     +  L 
Sbjct: 522 MELIGLPHVVVIGDRNIDAGVFEYKNRRTGEKQEVPFDQIVEFLK 566


>gi|160883649|ref|ZP_02064652.1| hypothetical protein BACOVA_01621 [Bacteroides ovatus ATCC 8483]
 gi|237722870|ref|ZP_04553351.1| uridine kinase [Bacteroides sp. 2_2_4]
 gi|293373430|ref|ZP_06619785.1| phosphoribulokinase/uridine kinase family protein [Bacteroides
           ovatus SD CMC 3f]
 gi|299147561|ref|ZP_07040625.1| phosphoribulokinase family protein [Bacteroides sp. 3_1_23]
 gi|156111062|gb|EDO12807.1| hypothetical protein BACOVA_01621 [Bacteroides ovatus ATCC 8483]
 gi|229447392|gb|EEO53183.1| uridine kinase [Bacteroides sp. 2_2_4]
 gi|292631568|gb|EFF50191.1| phosphoribulokinase/uridine kinase family protein [Bacteroides
           ovatus SD CMC 3f]
 gi|298514348|gb|EFI38233.1| phosphoribulokinase family protein [Bacteroides sp. 3_1_23]
          Length = 557

 Score =  141 bits (354), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 43/206 (20%), Positives = 91/206 (44%), Gaps = 2/206 (0%)

Query: 11  DGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRS 69
           + + K FP+ ++  D+    + +   + V+  +N +   L+  V     +E +   D   
Sbjct: 12  NNNSKEFPIGSSLLDIYYGFNLNFPYQVVSAKVNNRSEGLNFRVYNNKDVEFLDVRDQSG 71

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           +     S   ++ +AV  ++PE ++ +   +  G++ +    +P   +++ +I+++MQEI
Sbjct: 72  MRTYVRSLCFVLFKAVTELFPEGKLFVEHPVSKGYFCNLRIGRPIELEDVTRIKQRMQEI 131

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
           IA + P+ +      +A  +F  +    KV +LE+         Y  G+  D   G  + 
Sbjct: 132 IAENIPYHRIECHTAEAVRVFSERGMNDKVRLLET-SGSLYTYYYTLGDTIDYYYGNLLP 190

Query: 190 STGQVKKFFKLMKVAGAYWRGDSNRP 215
           STG +K F  +    G   R  S   
Sbjct: 191 STGYLKLFDIVKYYDGLLLRIPSREN 216


>gi|295706249|ref|YP_003599324.1| prolyl-tRNA synthetase [Bacillus megaterium DSM 319]
 gi|294803908|gb|ADF40974.1| prolyl-tRNA synthetase [Bacillus megaterium DSM 319]
          Length = 565

 Score =  140 bits (353), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 46/204 (22%), Positives = 84/204 (41%), Gaps = 11/204 (5%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           + H+ L R   +   +   SGV  +   G ++ Q +   +R ++      E+  P +   
Sbjct: 21  KSHQLLLRAGYMRQNS---SGVYSFLPLGKRVLQKVEQIVREEMDRAGSVELLMPALQQA 77

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LWQ+SG W SY   +  +K      +  R FAL   +     ++    +KSY+ LP+ L
Sbjct: 78  ELWQESGRWYSYGPELMRMKD-----RHGREFALGATHEEVITSLLRDEVKSYKRLPLNL 132

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFE 421
            +  + +R+E      GL+R R F   DA+ F   ++  +E   K+      I++  G  
Sbjct: 133 YQIQTKFRDEKRPRF-GLLRGREFIMKDAYSFHASQESLDEVYDKMFAAYSRIFERCGLN 191

Query: 422 KIMVKLSTRPEKRVGSDALWDDAE 445
              V   +       +      +E
Sbjct: 192 FRAVIADSGAMGGKDTHEFMVLSE 215



 Score = 78.3 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 25/153 (16%), Positives = 60/153 (39%), Gaps = 10/153 (6%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPI 553
           +         A Y++ +  +  P+++     G   R +  + E F        P  ++P 
Sbjct: 412 LGTRYSEAMGATYLDENG-RSQPMIMGCYGIGVS-RTVAAIAEQFNDENGLLWPEAVTPY 469

Query: 554 QAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           Q  V  +        E  +++ N L  +   +  D R E    K  +  +  +P+ +  G
Sbjct: 470 QVHVIPVNVKNDEQRELGEKLYNELLDNRFEVLLDDRQERAGVKFADSDLIGLPVRVTVG 529

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            + ASE  + ++   +  + +VS+ + +  + +
Sbjct: 530 KR-ASEGIVEVKVRKTGESLEVSVDNLVSTVKE 561


>gi|326559635|gb|EGE10049.1| prolyl-tRNA synthetase [Moraxella catarrhalis 7169]
 gi|326560025|gb|EGE10420.1| prolyl-tRNA synthetase [Moraxella catarrhalis 46P47B1]
 gi|326562507|gb|EGE12824.1| prolyl-tRNA synthetase [Moraxella catarrhalis 103P14B1]
 gi|326567687|gb|EGE17793.1| prolyl-tRNA synthetase [Moraxella catarrhalis BC1]
 gi|326574268|gb|EGE24216.1| prolyl-tRNA synthetase [Moraxella catarrhalis 101P30B1]
 gi|326575054|gb|EGE24983.1| prolyl-tRNA synthetase [Moraxella catarrhalis O35E]
          Length = 572

 Score =  140 bits (353), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 49/220 (22%), Positives = 92/220 (41%), Gaps = 10/220 (4%)

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLFH--IAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
            + +Q+++   +    D    + ++ L    I +  SG+  W   G ++ + +   +R +
Sbjct: 1   MKASQFIFATLKETPNDADIASSQLMLRAGLIRKLASGLYVWMPMGLRVLKRVERIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++  D +E+  P      LW +SG W+ Y A +   K      +  R F L P +     
Sbjct: 61  MEKIDSQELLMPVTQPGELWHESGRWEDYGAELLRFKD-----RHSRDFVLGPTHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +  + LKSY++LP+   +  + +R+E      G+MR R FT  DA+ F    E + N  
Sbjct: 116 DIARNELKSYKQLPITFYQIQTKFRDEIRPRF-GVMRAREFTMKDAYSFHIDKESLANTY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
             +++    I+   G     V+  T       S      A
Sbjct: 175 QDMYDAYNRIFTRLGLNFRAVQADTGSIGGFASHEFHVLA 214



 Score = 82.1 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 34/171 (19%), Positives = 61/171 (35%), Gaps = 18/171 (10%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NF 542
           +I R  + G I Q+        N   +    +   PV +    +G  + R I   IE N 
Sbjct: 405 SIKRGIEVGHIFQLGDKYSKALNCSVLGKEGK---PVTLMMGCYGIGVSRIIAAAIEQNH 461

Query: 543 KGNLPLWLSPIQ---------AIVTTITS---SAVEYAQEIANLLKSHHLSIETDFRNET 590
             N  +W  P             +  + S    A   AQ +   LK+  +++  D R+E 
Sbjct: 462 DDNGIIWAEPEDKADSIAPFYVAIVPMKSKDGDAEAKAQSLYQTLKARGINVLLDDRDER 521

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
              K  +  +  IP  I+   +  +E         +   Q +SL + + + 
Sbjct: 522 AGVKFADLELIGIPHRIVVSQRNLAENKYEYTNRATGDQQMLSLDELLALF 572


>gi|260175185|ref|ZP_05761597.1| uridine kinase (uridine monophosphokinase) [Bacteroides sp. D2]
 gi|315923417|ref|ZP_07919657.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313697292|gb|EFS34127.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 557

 Score =  140 bits (353), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 43/206 (20%), Positives = 91/206 (44%), Gaps = 2/206 (0%)

Query: 11  DGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRS 69
           + + K FP+ ++  D+    + +   + V+  +N +   L+  V     +E +   D   
Sbjct: 12  NNNSKEFPIGSSLLDIYYGFNLNFPYQVVSAKVNNRSEGLNFRVYNNKDVEFLDVRDQSG 71

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           +     S   ++ +AV  ++PE ++ +   +  G++ +    +P   +++ +I+++MQEI
Sbjct: 72  MRTYVRSLCFVLFKAVTELFPEGKLFVEHPVSKGYFCNLRIGRPIELEDVTRIKQRMQEI 131

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
           IA + P+ +      +A  +F  +    KV +LE+         Y  G+  D   G  + 
Sbjct: 132 IAENIPYHRIECHTAEAVRVFSERGMNDKVRLLET-SGSLYTYYYTLGDTIDYYYGNLLP 190

Query: 190 STGQVKKFFKLMKVAGAYWRGDSNRP 215
           STG +K F  +    G   R  S   
Sbjct: 191 STGYLKLFDIVKYYDGLLLRIPSREN 216


>gi|28899107|ref|NP_798712.1| prolyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|260364768|ref|ZP_05777355.1| proline--tRNA ligase [Vibrio parahaemolyticus K5030]
 gi|260876810|ref|ZP_05889165.1| proline--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|260895895|ref|ZP_05904391.1| proline--tRNA ligase [Vibrio parahaemolyticus Peru-466]
 gi|81839761|sp|Q87MC3|SYP_VIBPA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|28807331|dbj|BAC60596.1| prolyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|308089375|gb|EFO39070.1| proline--tRNA ligase [Vibrio parahaemolyticus Peru-466]
 gi|308091476|gb|EFO41171.1| proline--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|308115298|gb|EFO52838.1| proline--tRNA ligase [Vibrio parahaemolyticus K5030]
 gi|328474355|gb|EGF45160.1| prolyl-tRNA synthetase [Vibrio parahaemolyticus 10329]
          Length = 571

 Score =  140 bits (353), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 46/249 (18%), Positives = 96/249 (38%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +   L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R+
Sbjct: 3   TSNYLLSTLKETPNDAEVVSHQLMLRAGMIRKLA---SGLYTWLPTGLRVLRKVENIVRQ 59

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           +I      E   P V    LW+++G  +     +        T + +R F L P      
Sbjct: 60  EIDNAGAVETLMPVVQPFELWEETGRSEKMGPELLRF-----TDRHVRPFVLSPTAEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
            ++  + + SY++LP+ L +  + +R+E      G+MR R F   DA+ F   +    + 
Sbjct: 115 TSLVRNEVSSYKQLPLNLYQIQTKFRDERRPRF-GVMRAREFCMMDAYSFDIDKAGLEKS 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            + +H+     +   G E   V   +      GS      A++    +  + ++     I
Sbjct: 174 YQAMHDAYCKAFDRMGLEYRPVLADSGAIGGSGSQEFHVLADSGEDLIAFSTESDYAANI 233

Query: 464 NTGVLLGEG 472
                L   
Sbjct: 234 EKAEALAPA 242



 Score = 83.3 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 27/168 (16%), Positives = 60/168 (35%), Gaps = 13/168 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           + R  + G I Q+        N   +    +    V++    +G  + R +   IE    
Sbjct: 405 LKRGIEVGHIFQLGNVYSEAMNCSVLGPDGKN---VILEMGCYGIGVSRVVASAIEQNHD 461

Query: 545 N----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                 P  ++P Q  +  +    +    E A+++   L +  + +  D R E       
Sbjct: 462 KYGIIWPDAIAPFQVAIVPMNMHKSERVKEAAEKLYAELTAMGIEVLFDDRKERPGVMFS 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  +  IP  I+ GD+   E +   +   +     V++ D +  +  +
Sbjct: 522 DIELIGIPHTIVIGDRSMDEGNFEYKNRRTGEKTPVAMADIVEHVKSQ 569


>gi|326568855|gb|EGE18925.1| prolyl-tRNA synthetase [Moraxella catarrhalis BC8]
          Length = 572

 Score =  140 bits (353), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 49/220 (22%), Positives = 92/220 (41%), Gaps = 10/220 (4%)

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLFH--IAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
            + +Q+++   +    D    + ++ L    I +  SG+  W   G ++ + +   +R +
Sbjct: 1   MKASQFIFATLKETPNDADIASSQLMLRAGLIRKLASGLYVWMPMGLRVLKRVERIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++  D +E+  P      LW +SG W+ Y A +   K      +  R F L P +     
Sbjct: 61  MEKIDSQELLMPVTQPGELWHESGRWEDYGAELLRFKD-----RHSRDFVLGPTHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +  + LKSY++LP+   +  + +R+E      G+MR R FT  DA+ F    E + N  
Sbjct: 116 DIARNELKSYKQLPITFYQIQTKFRDEIRPRF-GVMRAREFTMKDAYSFHIDKESLANTY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
             +++    I+   G     V+  T       S      A
Sbjct: 175 QDMYDAYNRIFTRLGLNFRAVQADTGSIGGFASHEFHVLA 214



 Score = 82.1 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 34/171 (19%), Positives = 61/171 (35%), Gaps = 18/171 (10%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NF 542
           +I R  + G I Q+        N   +    +   PV +    +G  + R I   IE N 
Sbjct: 405 SIKRGIEVGHIFQLGDKYSKALNCSVLGKEGK---PVTLMMGCYGIGVSRIIAAAIEQNH 461

Query: 543 KGNLPLWLSPIQ---------AIVTTITS---SAVEYAQEIANLLKSHHLSIETDFRNET 590
             N  +W  P             +  + S    A   AQ +   LK+  +++  D R+E 
Sbjct: 462 DDNGIIWAEPEDKADSIAPFYVAIVPMKSKDGDAEAKAQSLYQTLKARGINVLLDDRDER 521

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
              K  +  +  IP  I+   +  +E         +   Q +SL + + + 
Sbjct: 522 AGVKFADLELIGIPHRIVVSQRNLAENKYEYTNRATGDQQMLSLDELLALF 572


>gi|300743963|ref|ZP_07072983.1| proline--tRNA ligase [Rothia dentocariosa M567]
 gi|300380324|gb|EFJ76887.1| proline--tRNA ligase [Rothia dentocariosa M567]
          Length = 605

 Score =  140 bits (353), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 40/203 (19%), Positives = 84/203 (41%), Gaps = 11/203 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +        GV  W   G K+ + + + +R ++     +E+  P 
Sbjct: 19  DAEVASHKLLVRAGYIR---RAAPGVYTWLPLGLKVLRKVENIVREEMNAIGAQEVLFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++ +  W+ Y  N+F ++      +      L P +      +      SY++L
Sbjct: 76  LLPREPYEATNRWEEYGDNLFRLQD-----RKGADMLLAPTHEEMFTLLVKDLYSSYKDL 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKD 417
           P+ + +  + YR+E      GL+R R F   D++ F   ++  NE  + H      I+  
Sbjct: 131 PLYIYQIQNKYRDEARPR-AGLLRGREFVMKDSYSFTVDDEGLNEAYEAHRAAYQRIFNR 189

Query: 418 FGFEKIMVKLSTRPEKRVGSDAL 440
            G + ++V   +       S+  
Sbjct: 190 LGLDTVIVTAQSGAMGGSRSEEF 212



 Score = 81.4 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 26/164 (15%), Positives = 62/164 (37%), Gaps = 11/164 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G I Q+            ++ + +     M    +   + R +  + E       
Sbjct: 442 RGIEMGHIFQLGRKYAEALGLKVLDQNGKLQTVTMGSYGI--GVTRALAAIAEGNHDEKG 499

Query: 546 --LPLWLSPIQAIVTTITSSA--VEYAQEIANLLKSHHLSIETDFRNET-INYKIREHSI 600
              P  L+P    +      A   EYA+ ++  L+   + +  D R +T    K  +  +
Sbjct: 500 LIWPRNLAPADVHIVITNKDAQSHEYAETLSAELEGAGVQVLLDDRLKTSPGVKFGDAEL 559

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
             +P I++ G +   + ++ ++   S   + +++ DA+  +  E
Sbjct: 560 LGVPTILVIG-RGFKDGTLELKDRRSGEARDIAVSDAVREILAE 602


>gi|311113213|ref|YP_003984435.1| proline--tRNA ligase [Rothia dentocariosa ATCC 17931]
 gi|310944707|gb|ADP41001.1| proline--tRNA ligase [Rothia dentocariosa ATCC 17931]
          Length = 605

 Score =  140 bits (353), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 40/203 (19%), Positives = 84/203 (41%), Gaps = 11/203 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +        GV  W   G K+ + + + +R ++     +E+  P 
Sbjct: 19  DAEVASHKLLVRAGYIR---RAAPGVYTWLPLGLKVLRKVENIVREEMNAIGAQEVLFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++ +  W+ Y  N+F ++      +      L P +      +      SY++L
Sbjct: 76  LLPREPYEATNRWEEYGDNLFRLQD-----RKGADMLLAPTHEEMFTLLVKDLYSSYKDL 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKD 417
           P+ + +  + YR+E      GL+R R F   D++ F   ++  NE  + H      I+  
Sbjct: 131 PLYIYQIQNKYRDEARPR-AGLLRGREFVMKDSYSFTVDDEGLNEAYEAHRAAYQRIFNR 189

Query: 418 FGFEKIMVKLSTRPEKRVGSDAL 440
            G + ++V   +       S+  
Sbjct: 190 LGLDTVIVTAQSGAMGGSRSEEF 212



 Score = 81.8 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 62/164 (37%), Gaps = 11/164 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G I Q+            ++ + +     M    +   + R +  + E       
Sbjct: 442 RGIEMGHIFQLGRKYAEALGLKVLDQNGKLQTVTMGSYGI--GVTRALAAIAEGNHDEKG 499

Query: 546 --LPLWLSPIQAIVTTITSSA--VEYAQEIANLLKSHHLSIETDFRNET-INYKIREHSI 600
              P  L+P    +      A   EYA+ ++  L+   + +  D R +T    K  +  +
Sbjct: 500 LIWPRNLAPADVHIVITNKDAQSHEYAETLSAELEGAGVQVLLDDRLKTSPGVKFGDAEL 559

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
             +P I++ G +   + ++ ++   +   + +++ DA+  +  E
Sbjct: 560 LGVPTILVIG-RGFKDGTLELKDRRNGEARDIAVSDAVREILAE 602


>gi|283458510|ref|YP_003363138.1| prolyl-tRNA synthetase [Rothia mucilaginosa DY-18]
 gi|283134553|dbj|BAI65318.1| prolyl-tRNA synthetase [Rothia mucilaginosa DY-18]
          Length = 624

 Score =  140 bits (353), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 85/203 (41%), Gaps = 11/203 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +        GV  W   G K+ + + + +R ++     +E++ P 
Sbjct: 33  DAEVASHKLLVRAGYIR---RAAPGVYTWLPLGLKVLRKVENIIREEMDAIGAQEVHFPA 89

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++ +  WD Y  N+F +K      +      L P +      +      SY++L
Sbjct: 90  LLPREPYEATNRWDEYGDNLFRLKD-----RKGADMLLAPTHEEMFTLLVKDLYSSYKDL 144

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKD 417
           PV L +  + YR+E      GL+R R F   D++ F   ++  NE    H      I++ 
Sbjct: 145 PVYLYQIQTKYRDEARPR-AGLLRGREFVMKDSYSFNIDDEGLNEAYMAHRAAYQRIFER 203

Query: 418 FGFEKIMVKLSTRPEKRVGSDAL 440
            G E ++V   +       S+  
Sbjct: 204 LGLEIVIVTAQSGAMGGSRSEEF 226



 Score = 80.6 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 62/163 (38%), Gaps = 9/163 (5%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I  +            ++ + +    V +     G       I   N      
Sbjct: 460 RGIEMGHIFALGRKYAEALGLKVLDQNGKLQT-VTMGSYGVGVTRALAAIAEGNHDEKGL 518

Query: 548 LW---LSPIQAIVTTITSSA--VEYAQEIANLLKSHHLSIETDFRNET-INYKIREHSIK 601
           +W   L+P    +      A   EYA+E++  L+S  L +  D R +T    K  +  + 
Sbjct: 519 IWPRNLAPADVHIVITGKDAASHEYAEELSASLESAGLQVMLDDRPKTSPGVKFGDAELL 578

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            +P I++ G +   +  + ++   S   ++VS+ +A+  +  E
Sbjct: 579 GVPTILVIG-RGFKDGVLELKDRRSGEAREVSVENAVAEVIAE 620


>gi|255326388|ref|ZP_05367472.1| proline--tRNA ligase [Rothia mucilaginosa ATCC 25296]
 gi|255296605|gb|EET75938.1| proline--tRNA ligase [Rothia mucilaginosa ATCC 25296]
          Length = 610

 Score =  140 bits (353), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 85/203 (41%), Gaps = 11/203 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +        GV  W   G K+ + + + +R ++     +E++ P 
Sbjct: 19  DAEVASHKLLVRAGYIR---RAAPGVYTWLPLGLKVLRKVENIIREEMDAIGAQEVHFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++ +  WD Y  N+F +K      +      L P +      +      SY++L
Sbjct: 76  LLPREPYEATNRWDEYGDNLFRLKD-----RKGADMLLAPTHEEMFTLLVKDLYSSYKDL 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKD 417
           PV L +  + YR+E      GL+R R F   D++ F   ++  NE    H      I++ 
Sbjct: 131 PVYLYQIQTKYRDEARPR-AGLLRGREFVMKDSYSFNIDDEGLNEAYMAHRAAYQRIFER 189

Query: 418 FGFEKIMVKLSTRPEKRVGSDAL 440
            G E ++V   +       S+  
Sbjct: 190 LGLEIVIVTAQSGAMGGSRSEEF 212



 Score = 80.6 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 62/163 (38%), Gaps = 9/163 (5%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I  +            ++ + +    V +     G       I   N      
Sbjct: 446 RGIEMGHIFALGRKYAEALGLKVLDQNGKLQT-VTMGSYGVGVTRALAAIAEGNHDEKGL 504

Query: 548 LW---LSPIQAIVTTITSSA--VEYAQEIANLLKSHHLSIETDFRNET-INYKIREHSIK 601
           +W   L+P    +      A   EYA+E++  L+S  L +  D R +T    K  +  + 
Sbjct: 505 IWPRNLAPADVHIVITGKEAASHEYAEELSASLESAGLQVMLDDRPKTSPGVKFGDAELL 564

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            +P I++ G +   +  + ++   S   ++VS+ +A+  +  E
Sbjct: 565 GVPTILVIG-RGFKDGVLELKDRRSGEAREVSVENAVAEVIAE 606


>gi|307198619|gb|EFN79469.1| Probable prolyl-tRNA synthetase, mitochondrial [Harpegnathos
           saltator]
          Length = 434

 Score =  140 bits (353), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 68/368 (18%), Positives = 134/368 (36%), Gaps = 31/368 (8%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I    +G+      G ++   LI  + +++ D   E+I  P +    LW++S  ++S + 
Sbjct: 46  IKSVSTGMYSILPLGMRVLNKLIKIIDKEMTDLGAEKIMLPALTSAKLWKKSNRYNSNKT 105

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            +F V    D     + + L P        + +      + LP+RL +  S +R+E    
Sbjct: 106 ELFTVTDRHD-----KEYILSPTYEEAICDLVSATYLPEKSLPLRLYQISSKWRDEMKPR 160

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK-DFGFEKIMVKLSTRPEKRV 435
           L G +R R F   D + F   +   N+    +NL+   Y   F    I    +      +
Sbjct: 161 L-GFIRSREFIMKDLYTF---DTTLNKAQDTYNLVCESYSNIFKQIGIDHMKAVGDVGTI 216

Query: 436 GSDALWDDA--ENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
           G  +  +     +I + V+    +S    IN  +            E   +       + 
Sbjct: 217 GGLSSHEYHYISDIGEDVILWC-SSCNYTINEIISKI-----TTCPECKGELQRHNSVEI 270

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE----NFKGNLPLW 549
           G   +  N         +   + K  P+++     G   R   +++E    N +   P  
Sbjct: 271 GHTFL-LNTKYSQPLNAMYIENNKLKPMIMGCYGLGVS-RIFALIVEILSTNNEMRWPTK 328

Query: 550 LSPIQAIVTTITSSAVE-----YAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKI 603
           L+P  A +    + + E     Y +++  +L+   +    D R + TI  ++        
Sbjct: 329 LAPYTACIIPPKTGSKEEYISAYIEQLFEILQKRDIDTILDDRTQFTIGKRLVYARAIGY 388

Query: 604 PIIIICGD 611
           P II+ G 
Sbjct: 389 PYIIVIGK 396


>gi|291280439|ref|YP_003497274.1| prolyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
 gi|290755141|dbj|BAI81518.1| prolyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
          Length = 573

 Score =  140 bits (353), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 54/248 (21%), Positives = 101/248 (40%), Gaps = 11/248 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  L        E+E   H+ + R   +  +A    G+  +   G K+ + + + +R+ 
Sbjct: 4   SQYFLPTLREDPSEAEVVSHKFMLRAGMIRKVAA---GIYNYLPAGLKVIKKVENIVRKY 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           + +    E+  P V+   LW +SG W+ Y   +  +K   D     R F + P +     
Sbjct: 61  MNEAGAIELLMPAVVPAELWIESGRWNVYGKELLRLKDRHD-----RDFCIGPTHEEVVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNEC 404
            +  + +KSY++LP+ L +  + +R+E      GLMR R F   DA+ F    E      
Sbjct: 116 DIVRNEVKSYKQLPLNLYQIQTKFRDEVRPRF-GLMRGREFIMKDAYSFDVDDEGAEKSY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
           + ++     I++  G E ++V+  +       S      A+     V+          I 
Sbjct: 175 MLMYEAYCKIFEACGLEYVVVEADSGAIGGNFSHEFMVTADTGEDFVISCTNCDFAANIE 234

Query: 465 TGVLLGEG 472
              +L EG
Sbjct: 235 KAPILDEG 242



 Score = 84.1 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 36/253 (14%), Positives = 82/253 (32%), Gaps = 30/253 (11%)

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
           F   + +       + +        G  +           R      + D  N + G   
Sbjct: 332 FSGPKGLDIPVYADYEIKYMKNFVLGVNEKDKHQINSNLGRDFEVDGFGDFRNAVPGDKC 391

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS 513
                 + +I  G+ +G     G K+                           NA+Y++ 
Sbjct: 392 ARCKKGEYKITKGIEVGHIFKLGTKYS-----------------------KAMNAYYLDK 428

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL---SPIQAIVTTI---TSSAVEY 567
             ++   +++     G        + +N      +W    +P + ++  I   +   V  
Sbjct: 429 DGKQKL-MVMGCYGIGIGRTAAAAIEQNHDEKGIIWPVQIAPFEVVIVPINTNSEDVVNL 487

Query: 568 AQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGST 627
           ++ +   LK++++ +  D R+E    K  +  +   P+ I  G K  ++ ++ I    + 
Sbjct: 488 SETLYLKLKNNNVDVLIDDRDERAGVKFNDADLVGYPLRINVGAKALAKGNVEIFIRKTK 547

Query: 628 TTQKVSLLDAIPI 640
            T +V   DAI  
Sbjct: 548 ETVEVKKEDAIAK 560


>gi|197119263|ref|YP_002139690.1| prolyl-tRNA synthetase [Geobacter bemidjiensis Bem]
 gi|226701292|sp|B5EIT9|SYP_GEOBB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|197088623|gb|ACH39894.1| prolyl-tRNA synthetase [Geobacter bemidjiensis Bem]
          Length = 573

 Score =  140 bits (353), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 45/220 (20%), Positives = 85/220 (38%), Gaps = 11/220 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  +        ++E   H+ + R   +  +A    G+  +   G +  + + + +R +
Sbjct: 4   SQYFIPTVKETPSDAEVISHKLMLRAGMIRKLAA---GIYNYLPFGLRSIRKVEAIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P V    LW++SG W+ Y   +       D       F + P +     
Sbjct: 61  MNRAGAIELLMPAVQPAELWKESGRWEFYGKELLRFNDRKDA-----EFCMGPTHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    ++SYR+LP+ L +    +R+E      GLMR R F   DA+ F   E   +   
Sbjct: 116 DLIRKEVRSYRQLPINLYQIQGKFRDEIRPRF-GLMRGREFIMKDAYSFDVNEAGADVSY 174

Query: 406 -KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
            K++     I++  G +   V+  T       S      A
Sbjct: 175 EKMYKAYRRIFERCGLKFRAVEADTGTIGGSYSHEFMVLA 214



 Score = 91.8 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 74/170 (43%), Gaps = 15/170 (8%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN- 545
           R  + G +  +         A ++++  ++    +I    +G  + R +   IE      
Sbjct: 405 RGIEVGHVFKLGTKYSKALKATFLDADGKEQ---IIFMGCYGIGVGRTVAACIEQNHDEN 461

Query: 546 ---LPLWLSPIQAIVTTITSSAVEY---AQEIANLLKSHHLSIETDFRNETINYKIREHS 599
               P+ ++P Q I++++++   E    ++ I   L    + +  D R+E   +K ++  
Sbjct: 462 GIIFPIPIAPFQCIISSLSAKEDEVKAASESIYQELLEAGIEVLLDDRDERPGFKFKDAD 521

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT---KESL 646
           +  IP+ I+ G K  +E  + ++   S   + + + +AI  +    KE+L
Sbjct: 522 LIGIPLRIVVGAKALAEGKVELKERRSGEVEVLPIAEAIAKVKAAVKEAL 571


>gi|333024111|ref|ZP_08452175.1| putative prolyl-tRNA synthetase [Streptomyces sp. Tu6071]
 gi|332743963|gb|EGJ74404.1| putative prolyl-tRNA synthetase [Streptomyces sp. Tu6071]
          Length = 563

 Score =  140 bits (353), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 58/325 (17%), Positives = 118/325 (36%), Gaps = 21/325 (6%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++E   H+ L R   +   A    G+  W   G K+   +   +R +
Sbjct: 8   SRLMVKTLRDDPADAETLSHKLLVRAGYVRRTAA---GIWSWLPLGKKVLDNISQIVREE 64

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E+  P +L +  ++ SG W+ Y   +F +K      +    + L P +     
Sbjct: 65  MDAIGAQEVLLPALLPREPYEASGRWEEYGDLLFRLKD-----RKGADYLLGPTHEEIFT 119

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            V      SY++LPV L +  + YR+E      G++R R F   D++ F T ++   E  
Sbjct: 120 QVVKDQCTSYKDLPVMLYQVQTKYRDEARPR-SGVLRGREFVMKDSYSFDTTDEGLAESY 178

Query: 406 KIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA---ENIMKGVLDTIKNSSQD 461
            +H      I+   G +  +V   +       S+     A   E+      +    ++ +
Sbjct: 179 ALHREAYRKIFARLGLDYRIVSAVSGAMGGSASEEFLAPAAAGEDTFADCPNCGFAANTE 238

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
            +       +G+ +GP  E    D      +     +     +      V    E     
Sbjct: 239 AVTFKGAAMDGSAHGPVEELDTPDT--PTIESLAEHLGVPASATLKNLLVKVDGE----- 291

Query: 522 MIHRAVFGSIERFIGIMIENFKGNL 546
           ++   V G  E  +G + E+    +
Sbjct: 292 IVAVGVPGDREVDLGKLGEHLAPAV 316



 Score = 88.7 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 28/164 (17%), Positives = 61/164 (37%), Gaps = 10/164 (6%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
            + R  + G I Q+       F    +  + +     M    +   + R +  + E    
Sbjct: 402 HLDRAIEIGHIFQLGRKYADTFQLDVLGQNGKPVRVTMGSYGI--GVSRAVAALAEQTAD 459

Query: 545 NLPL-WLSPIQA----IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREH 598
           +  L W + +      +V        E A EIA+ L +    +  D R   +   K  + 
Sbjct: 460 DKGLCWPAEVAPADVHVVAAGKVLQTELALEIADKLAAAGARVLVDDRAGVSPGVKFTDA 519

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +  +P  +I G + A    + ++   +   +++S+ +A+  LT
Sbjct: 520 ELIGVPKTVIAGRRSAE-GIVELKDRRTGEREELSVEEAVARLT 562


>gi|37522094|ref|NP_925471.1| prolyl-tRNA synthetase [Gloeobacter violaceus PCC 7421]
 gi|81834313|sp|Q7NHL0|SYP_GLOVI RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|35213093|dbj|BAC90466.1| prolyl-tRNA synthetase [Gloeobacter violaceus PCC 7421]
          Length = 589

 Score =  140 bits (353), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 47/253 (18%), Positives = 88/253 (34%), Gaps = 20/253 (7%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
            H+ L R   +  +A    G+  +     ++ Q +   +R ++     +E    Q+    
Sbjct: 23  SHKLLLRAGFIRPLAGTA-GLYAYGPLMQRVLQKVGRIVREEMDATGAQEALFCQLQPAE 81

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           +W++SG W  Y  +       D   +  R + L P +           L SY++LP  L 
Sbjct: 82  IWKESGRWTVYTQDGTMFTLKDGQGEQAREYGLGPTHEEAVCDFVRASLNSYKQLPFHLY 141

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKDFGFEK 422
           +  + +RNE      GLMR R F   D + F  T E +      ++    ++++  G + 
Sbjct: 142 QVQTKFRNEKRPRF-GLMRGREFIMKDGYSFHATPESLDETYRAMYRAYTNMFRRCGLDF 200

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
             V+  +      GS              L  I   +       +L  + A Y    E  
Sbjct: 201 RAVEADSGAIGGSGSHEF---------MALCDIGEDT-------ILYCDAAGYAANVEKA 244

Query: 483 LKDAIGRDWQCGT 495
           +      +     
Sbjct: 245 VSLVSDPEAIGPG 257



 Score = 91.0 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 60/161 (37%), Gaps = 9/161 (5%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN--- 545
           R  + G I       SR         + +  P ++     G   R    ++E    N   
Sbjct: 418 RGVELGHIFKLGTKYSRPMQVLFADEAGELQPALMGCYGVGVS-RLPAAVVEQSHDNDGI 476

Query: 546 -LPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             P+ ++P Q ++        +  + A+E+   L +  +    D R E    K ++  + 
Sbjct: 477 LWPIAIAPYQVVLVPANVAVEAQRQAAEELYRSLTAAGIDTLLDDRPERAGVKFKDADLI 536

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            IP+ +  G ++     + I+  G    +KV L +A+  + 
Sbjct: 537 GIPLRVTLG-RDLEAGLVEIKVRGGGAAEKVPLAEALAQIK 576


>gi|302522218|ref|ZP_07274560.1| prolyl-tRNA synthetase [Streptomyces sp. SPB78]
 gi|302431113|gb|EFL02929.1| prolyl-tRNA synthetase [Streptomyces sp. SPB78]
          Length = 563

 Score =  140 bits (353), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 58/325 (17%), Positives = 118/325 (36%), Gaps = 21/325 (6%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++E   H+ L R   +   A    G+  W   G K+   +   +R +
Sbjct: 8   SRLMVKTLRDDPADAETLSHKLLVRAGYVRRTAA---GIWSWLPLGKKVLDNISQIVREE 64

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E+  P +L +  ++ SG W+ Y   +F +K      +    + L P +     
Sbjct: 65  MDAIGAQEVLLPALLPREPYEASGRWEEYGDLLFRLKD-----RKGADYLLGPTHEEIFT 119

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            V      SY++LPV L +  + YR+E      G++R R F   D++ F T ++   E  
Sbjct: 120 QVVKDQCTSYKDLPVMLYQVQTKYRDEARPR-SGVLRGREFVMKDSYSFDTTDEGLAESY 178

Query: 406 KIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA---ENIMKGVLDTIKNSSQD 461
            +H      I+   G +  +V   +       S+     A   E+      +    ++ +
Sbjct: 179 ALHREAYRKIFARLGLDYRIVSAVSGAMGGSASEEFLAPAAAGEDTFADCPNCGFAANTE 238

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
            +       +G+ +GP  E    D      +     +     +      V    E     
Sbjct: 239 AVTFKGAAVDGSAHGPVEELDTPDT--PTIESLAEHLGVPASATLKNLLVKVDGE----- 291

Query: 522 MIHRAVFGSIERFIGIMIENFKGNL 546
           ++   V G  E  +G + E+    +
Sbjct: 292 IVAVGVPGDREVDLGKLGEHLAPAV 316



 Score = 87.1 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 28/164 (17%), Positives = 61/164 (37%), Gaps = 10/164 (6%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
            + R  + G I Q+       F    +  + +     M    +   + R +  + E    
Sbjct: 402 HLDRAIEIGHIFQLGRKYADTFQLDVLGQNGKPVRVTMGSYGI--GVSRAVAALAEQTAD 459

Query: 545 NLPL-WLSPIQA----IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREH 598
           +  L W + +      +V        E A EIA+ L +    +  D R   +   K  + 
Sbjct: 460 DKGLCWPAEVSPADVHVVAAGKVLQTELALEIADKLAAAGARVLVDDRAGVSPGVKFTDA 519

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +  +P  +I G + A    + ++   +   +++S+ +A+  LT
Sbjct: 520 ELIGVPKTVIAGRRSAE-GIVELKDRRTGEREELSVEEAVARLT 562


>gi|255953035|ref|XP_002567270.1| Pc21g02050 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211588981|emb|CAP95102.1| Pc21g02050 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 621

 Score =  140 bits (353), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 77/419 (18%), Positives = 149/419 (35%), Gaps = 68/419 (16%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRAN 317
            D SG        + I++ +  Y  + IK    +  + P  + + + Q +  H + + A 
Sbjct: 111 YDVSGCFILKPALFFIWEEIQEYFNKAIKGMGVKNCSFPLFVSEDVLQREKDHIEGFAAE 170

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGS-VYRNEPSGS 376
           +  V  A  T  + +  A++P +       +   ++S+R+LP+RL ++ S V R E    
Sbjct: 171 VAWVTHAGSTPLEKK-IAIRPTSETVMYPYYAKWIRSHRDLPLRLNQWNSVVVRWEFK-H 228

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFN-ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
              L+R R F   + H     E     E L I +    IY++     ++    T  EK  
Sbjct: 229 PQPLLRSREFLWQEGHTAHLTEGAAREEVLSILDYYAKIYEELLAVPVVKGQKTEKEKFA 288

Query: 436 GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGT 495
           G +                                    Y    E  +  A GR  Q GT
Sbjct: 289 GGN------------------------------------YTTTVEGYIP-ATGRGIQGGT 311

Query: 496 IQ-VDFNLPSRFNAFYVNSHS---EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLS 551
              +  N    F     +  S   EK  P+ + +  +G   R +G+M+     N  L L 
Sbjct: 312 SHGLGQNFSKMFGITVEDPTSTVDEKKPPLHVWQNSWGLSTRSLGVMVMIHSDNKGLVLP 371

Query: 552 PI----QAIVTTIT----------SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           P     Q I+  +                    +  +L +  +  ++D  + +  +K  +
Sbjct: 372 PRVAELQVIIVPVGLTAKTTEEEREKLNAEVDGLVAVLVAAGVRADSDKSSYSPGWKFNQ 431

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRF---GSTTTQKVSLLDA---IPILTKESLPPDC 650
           + ++ +P+ +  G  E++   +   R    G      + + +    +P L  E++  D 
Sbjct: 432 YELRGVPLRLEFGPGESAGHFVTTARRDIPGKDGKGSLPIPELATGVPALL-ETIQSDL 489


>gi|86146905|ref|ZP_01065224.1| prolyl-tRNA synthetase [Vibrio sp. MED222]
 gi|85835357|gb|EAQ53496.1| prolyl-tRNA synthetase [Vibrio sp. MED222]
          Length = 546

 Score =  140 bits (353), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 60/301 (19%), Positives = 110/301 (36%), Gaps = 18/301 (5%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYR 315
            I +  SG+  W   G ++ + + + +R++I      EI  P V    LW+++G  +   
Sbjct: 6   MIRKLASGLYTWLPTGLRVLRKVENIVRQEIDNAGAVEILMPVVQPFELWEETGRSEKMG 65

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
             +        T +  R F L P       ++  + + SY++LP+ L +  + +R+E   
Sbjct: 66  PELLRF-----TDRHSRPFVLSPTAEEVVTSLVRNEISSYKQLPLNLYQIQTKFRDERRP 120

Query: 376 SLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              G+MR R F+  DA+ F    E +      +H+     +   G E   V   +     
Sbjct: 121 RF-GVMRAREFSMMDAYSFDIDKEGLEKSYQAMHDAYCKAFDRMGLEYRPVLADSGAIGG 179

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG---EGAFYGPKFEYILKDAIGRDW 491
            GS      AE+    +  + ++     I     L    E A   P  E  L D      
Sbjct: 180 SGSQEFHVLAESGEDLIAFSSESDYAANIEKAEALAPTTEAA--APTQEMELVDTPNAKT 237

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLS 551
               ++       +         S++ +  +I   + G  E     + E    NLP   +
Sbjct: 238 IAELVEQHGLAIEKTVKTLFVKASDEVNADIIALIIRGDHE-----LNEVKAENLPQVAT 292

Query: 552 P 552
           P
Sbjct: 293 P 293



 Score = 85.2 bits (209), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 62/168 (36%), Gaps = 13/168 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           + R  + G I Q+        N   +    +    V++    +G  + R +   IE    
Sbjct: 380 LKRGIEVGHIFQLGNTYSKAMNCNVLGPDGKS---VILEMGCYGIGVSRVVASAIEQNHD 436

Query: 545 N----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                 P  L+P Q  +  +    +    E A+++   L +  + +  D R E      +
Sbjct: 437 KFGITWPDALAPFQVAIVPMNMHKSERVKEAAEKLYAELTAMGIEVLFDDRKERPGVMFK 496

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  +  IP  I+ GD+   E +   +   +   + +++   I  LT +
Sbjct: 497 DIELVGIPHTIVIGDRSMDEGNFEYKNRRTGDKEAIAMDTVIEHLTAQ 544


>gi|294500903|ref|YP_003564603.1| prolyl-tRNA synthetase [Bacillus megaterium QM B1551]
 gi|294350840|gb|ADE71169.1| prolyl-tRNA synthetase [Bacillus megaterium QM B1551]
          Length = 565

 Score =  140 bits (353), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 46/204 (22%), Positives = 85/204 (41%), Gaps = 11/204 (5%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           + H+ L R   +    ++ SGV  +   G ++ Q +   +R ++      E+  P +   
Sbjct: 21  KSHQLLLRAGYMR---QNASGVYSFLPLGKRVLQKVEQIVREEMDRAGSVELLMPALQQA 77

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LWQ+SG W SY   +  +K      +  R FAL   +     ++    +KSY+ LP+ L
Sbjct: 78  ELWQESGRWYSYGPELMRMKD-----RHGREFALGATHEEVITSLLRDEVKSYKRLPLNL 132

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFE 421
            +  + +R+E      GL+R R F   DA+ F   ++  +E   K+      I++  G  
Sbjct: 133 YQIQTKFRDEKRPRF-GLLRGREFIMKDAYSFHASQESLDEVYDKMFAAYSRIFERCGLN 191

Query: 422 KIMVKLSTRPEKRVGSDALWDDAE 445
              V   +       +      +E
Sbjct: 192 FRAVIADSGAMGGKDTHEFMVLSE 215



 Score = 78.3 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 25/153 (16%), Positives = 60/153 (39%), Gaps = 10/153 (6%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPI 553
           +         A Y++ +  +  P+++     G   R +  + E F        P  ++P 
Sbjct: 412 LGTRYSEAMGATYLDENG-RNQPMIMGCYGIGVS-RTVAAIAEQFNDENGLLWPEAVTPY 469

Query: 554 QAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           Q  V  +        E  +++ N L  +   +  D R E    K  +  +  +P+ +  G
Sbjct: 470 QVHVIPVNVKNDEQRELGEKLYNELLDNRFEVLLDDRQERAGVKFADSDLIGLPVRVTVG 529

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            + ASE  + ++   +  + +VS+ + +  + +
Sbjct: 530 KR-ASEGIVEVKVRKTGESLEVSVDNLVSTVKE 561


>gi|257467949|ref|ZP_05632045.1| prolyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
 gi|317062235|ref|ZP_07926720.1| prolyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
 gi|313687911|gb|EFS24746.1| prolyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
          Length = 569

 Score =  140 bits (353), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 55/249 (22%), Positives = 102/249 (40%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  +       +E+E   H+ L R   +  +    SGV  +   G+K  + + + +R 
Sbjct: 3   FSKSYIKTLKETPKEAETASHKLLLRASMIKKL---TSGVYTYLPLGYKALKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +EI  P +    LW++SG WD     M  ++      ++ R F L P +    
Sbjct: 60  EMDRAGSQEILMPVLQPAELWKESGRWDVMGPLMMKLQD-----RNKRDFVLGPTHEEVV 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNE 403
             +  + + SY+ LP+ L +  + +R+E      GLMR R F   DA+ F  T E +  E
Sbjct: 115 TDLIRNDISSYKALPLSLYQIQTKFRDEIRPRF-GLMRGREFVMKDAYSFHATAESLDEE 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            L + +    I+   G +   V+  +      GS      A++    ++     S    +
Sbjct: 174 FLNMRDTYSRIFSRCGLKFRPVEADSGAIGGSGSQEFHVLADSGEDEIIYCDSCSYAANV 233

Query: 464 NTGVLLGEG 472
            T V   E 
Sbjct: 234 ETAVSRVEA 242



 Score = 75.2 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 62/164 (37%), Gaps = 13/164 (7%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN- 545
           R  + G I  +        NA +++   E     ++    +G  + R +   IE      
Sbjct: 405 RGIEVGHIFKLGDKYSKALNATFLDDKGESK---VMLMGCYGIGVSRTLASAIEQNNDEF 461

Query: 546 ---LPLWLSPIQAIVTT---ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
               P  L+P    V          V+ A+EI   L +  +    D R+E   +K ++  
Sbjct: 462 GIIWPTALAPYIVDVIPANVKNEEQVKVAEEIYEALLNDGIDSMIDDRDERPGFKFKDAD 521

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +   P  ++ G + A E  + ++   +  T ++S  D +  + +
Sbjct: 522 LIGFPFKVVSGKR-AGEGIVELKIRRTGETLEISKDDVVSTVRE 564


>gi|153836755|ref|ZP_01989422.1| prolyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
 gi|260900371|ref|ZP_05908766.1| proline--tRNA ligase [Vibrio parahaemolyticus AQ4037]
 gi|149749901|gb|EDM60646.1| prolyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
 gi|308108556|gb|EFO46096.1| proline--tRNA ligase [Vibrio parahaemolyticus AQ4037]
          Length = 571

 Score =  140 bits (353), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 46/249 (18%), Positives = 96/249 (38%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +   L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R+
Sbjct: 3   TSNYLLSTLKETPNDAEVVSHQLMLRAGMIRKLA---SGLYTWLPTGLRVLRKVENIVRQ 59

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           +I      E   P V    LW+++G  +     +        T + +R F L P      
Sbjct: 60  EIDNAGAVETLMPVVQPFELWEETGRSEKMGPELLRF-----TDRHVRPFVLSPTAEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
            ++  + + SY++LP+ L +  + +R+E      G+MR R F   DA+ F   +    + 
Sbjct: 115 TSLVRNEVSSYKQLPLNLYQIQTKFRDERRPRF-GVMRAREFCMMDAYSFDIDKAGLEKS 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            + +H+     +   G E   V   +      GS      A++    +  + ++     I
Sbjct: 174 YQAMHDAYCKAFDRMGLEYRPVLADSGAIGGSGSQEFHVLADSGEDLIAFSTESDYAANI 233

Query: 464 NTGVLLGEG 472
                L   
Sbjct: 234 EKAEALAPA 242



 Score = 82.9 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 27/168 (16%), Positives = 60/168 (35%), Gaps = 13/168 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           + R  + G I Q+        N   +    +    V++    +G  + R +   IE    
Sbjct: 405 LKRGIEVGHIFQLGNVYSEAMNCSVLGPDGKN---VILEMGCYGIGVSRVVASAIEQNHD 461

Query: 545 N----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                 P  ++P Q  +  +    +    E A+++   L +  + +  D R E       
Sbjct: 462 KYGIIWPDAIAPFQVAIVPMNMHKSERVKEEAEKLYAELTAMGIEVLFDDRKERPGVMFS 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  +  IP  I+ GD+   E +   +   +     V++ D +  +  +
Sbjct: 522 DIELIGIPHTIVIGDRSMDEGNFEYKNRRTGEKTPVAMADIVEHVKSQ 569


>gi|169344114|ref|ZP_02865097.1| prolyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
 gi|169297725|gb|EDS79824.1| prolyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
          Length = 570

 Score =  140 bits (353), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 53/240 (22%), Positives = 98/240 (40%), Gaps = 11/240 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +   +        E+E   H+ + R   +  +A    G+  +   G K+ + + + +R +
Sbjct: 4   SNMLVGTLREVPAEAEIESHKLMLRAGLMRKMAA---GIYNYMPLGLKVIENVKNIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           + +   +E   P ++   LWQ+SG WD+Y A MF +K      +  R F L P +     
Sbjct: 61  MNNAGAQEFLAPALIPAELWQESGRWDAYGAEMFRLKD-----RHNRDFCLGPTHEEVFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +  + +KSY++LP+ L +  + YR+E      G+MR R F   D + F    E +    
Sbjct: 116 DIVRNEIKSYKQLPLNLYQIQTKYRDERRPRF-GVMRSREFIMKDGYSFDKDQEGLDLAY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            K+    ++I+   G +   V   +      GS      +E     V+          I 
Sbjct: 175 EKMRKAYVNIFNRCGLDAKTVAADSGAIGGSGSAEFMVKSEVGEDDVVFCTACDYAANIE 234



 Score = 86.8 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 32/172 (18%), Positives = 60/172 (34%), Gaps = 9/172 (5%)

Query: 480 EYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           E   +  I R  + G I  +         A +++    K  P ++     G       I+
Sbjct: 393 ECGKEITISRGTEVGHIFKLGTKYSESMGATFIDEDG-KAKPFIMGCYGIGVTRTVASII 451

Query: 539 IENFKGNLPLWL---SPIQAIVTTITSSAVEYA---QEIANLLKSHHLSIETDFRNETIN 592
            ++   N  +W    +P    V        E A   +EI N L+   +    D R E   
Sbjct: 452 EQHNDENGIIWPLEVAPYHVSVIPANVKNEEQATKAEEIYNELRKMGVEALLDDRKERAG 511

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            K ++  +  IP+ I  G K   E  +  +       + +S+ +    + +E
Sbjct: 512 VKFKDSELMGIPMRITVG-KMIGEGQVEFKLRNGGEVETLSIEEVYNRVREE 562


>gi|315444957|ref|YP_004077836.1| prolyl-tRNA synthetase, family II [Mycobacterium sp. Spyr1]
 gi|315263260|gb|ADU00002.1| prolyl-tRNA synthetase, family II [Mycobacterium sp. Spyr1]
          Length = 584

 Score =  140 bits (353), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 46/251 (18%), Positives = 88/251 (35%), Gaps = 22/251 (8%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +  +   G G+  W   G K+ + +   +R ++     +EI  P 
Sbjct: 15  DAEVPSHKLLIRAGYVRPV---GPGLYSWLPLGLKVLRKIEHIVRSEMDAIGGQEILFPA 71

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++ +  W  Y   +F ++   D       + L P +             SY++ 
Sbjct: 72  LLPRAPYETTNRWTEYGDTLFRLQDRRDN-----DYLLGPTHEEMFTLTVKGEYSSYKDF 126

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RL +  + YR+E      G++R R F   D++ F   +         H        D 
Sbjct: 127 PLRLYQIQNKYRDEARPR-AGILRGREFLMKDSYSFDVDDDGLKNAYHAHREAYQRIFDR 185

Query: 419 ------------GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
                       G            E  VG D     A++     ++ +  ++ D I   
Sbjct: 186 LKVRYVIVSAVSGAMGGSASEEFLAESEVGEDTFVRCAQSGYAANVEAVVTTAPDPIPLD 245

Query: 467 VLLGEGAFYGP 477
            L     +  P
Sbjct: 246 GLPEAVVYDTP 256



 Score = 82.9 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 26/153 (16%), Positives = 60/153 (39%), Gaps = 10/153 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G + Q+       FNA  +  + +     M    +   + R + ++ E     L 
Sbjct: 419 RGIEIGHVFQLGRKYADAFNADVLGENGKPVRLTMGSYGI--GVSRLVAVIAEQHHDELG 476

Query: 548 L-WL---SP--IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           L W    +P  +  ++    + A   A E+A  L      +  D R  +   K ++  + 
Sbjct: 477 LRWPGSVAPFAVHVVIANKDAEARAGATELATALDRAGADVLLDDRTASPGVKFKDAELL 536

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
            +P I++ G +  ++  + +R   S   +++ +
Sbjct: 537 GVPWIVVVG-RGWADGVVELRDRFSGEKREIPV 568


>gi|260436778|ref|ZP_05790748.1| prolyl-tRNA synthetase [Synechococcus sp. WH 8109]
 gi|260414652|gb|EEX07948.1| prolyl-tRNA synthetase [Synechococcus sp. WH 8109]
          Length = 597

 Score =  140 bits (353), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 61/290 (21%), Positives = 108/290 (37%), Gaps = 11/290 (3%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E   H+ L R   +  +   GSG+  +    W++ Q + + +R ++     +E   PQ
Sbjct: 21  EAEITSHQLLLRAGYIRRV---GSGIYAYLPLMWRVLQKITAVVREEMNRAGAQETLLPQ 77

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W  Y A    +   +D  +  R   + P +     ++    L+SYR+L
Sbjct: 78  LHPAELWQKSGRWQGYTAGEGIMFHLED--RQGRELGIGPTHEEVITSLAGELLRSYRQL 135

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKD 417
           PV L +  + +R+E      GLMR R F   DA+ F   E    E    +      I++ 
Sbjct: 136 PVNLYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSFHASEADLRETYGAMDQAYRRIFER 194

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA---F 474
            G + + V   +       S      A+     +L +            V +   A    
Sbjct: 195 CGLDAVPVDADSGAIGGAASQEFMVTADAGEDLILISDDGQYAANQEKAVSIPSAASPLP 254

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIH 524
            GP+           +  C     D +   +   F      E   P+++ 
Sbjct: 255 DGPEESIPTPGLGSIESLCNAKGWDPSQVVKVLLFVATLDDETLQPLLVS 304



 Score = 86.8 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 31/166 (18%), Positives = 61/166 (36%), Gaps = 7/166 (4%)

Query: 488 GRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
            R  + G I       S+       + + K  P  +     G        + ++   +  
Sbjct: 433 KRGIEVGHIFQLGRKYSQAMESRFTNENGKTEPFWMGCYGIGVSRLAQAAVEQHHDDSGI 492

Query: 548 LWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            W    +P +AIV           +  + +   L++  + +  D R E    K ++  + 
Sbjct: 493 CWPTAIAPFEAIVVVANIQDDIQAQLGEALYAELQAAGVDVLLDDRKERAGVKFKDADLI 552

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLP 647
            IP  I+ G ++ASE ++ +    S   QK+   +A+  L K   P
Sbjct: 553 GIPWRIVVG-RDASEGTVELVCRSSREVQKLPHAEAVTCLIKALHP 597


>gi|145224625|ref|YP_001135303.1| prolyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
 gi|145217111|gb|ABP46515.1| prolyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
          Length = 588

 Score =  140 bits (353), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 46/251 (18%), Positives = 88/251 (35%), Gaps = 22/251 (8%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +  +   G G+  W   G K+ + +   +R ++     +EI  P 
Sbjct: 19  DAEVPSHKLLIRAGYVRPV---GPGLYSWLPLGLKVLRKIEHIVRSEMDAIGGQEILFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++ +  W  Y   +F ++   D       + L P +             SY++ 
Sbjct: 76  LLPRAPYETTNRWTEYGDTLFRLQDRRDN-----DYLLGPTHEEMFTLTVKGEYSSYKDF 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RL +  + YR+E      G++R R F   D++ F   +         H        D 
Sbjct: 131 PLRLYQIQNKYRDEARPR-AGILRGREFLMKDSYSFDVDDDGLKNAYHAHREAYQRIFDR 189

Query: 419 ------------GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
                       G            E  VG D     A++     ++ +  ++ D I   
Sbjct: 190 LKVRYVIVSAVSGAMGGSASEEFLAESEVGEDTFVRCAQSGYAANVEAVVTTAPDPIPLD 249

Query: 467 VLLGEGAFYGP 477
            L     +  P
Sbjct: 250 GLPEAVVYDTP 260



 Score = 82.9 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 26/153 (16%), Positives = 60/153 (39%), Gaps = 10/153 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G + Q+       FNA  +  + +     M    +   + R + ++ E     L 
Sbjct: 423 RGIEIGHVFQLGRKYADAFNADVLGENGKPVRLTMGSYGI--GVSRLVAVIAEQHHDELG 480

Query: 548 L-WL---SP--IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           L W    +P  +  ++    + A   A E+A  L      +  D R  +   K ++  + 
Sbjct: 481 LRWPGSVAPFAVHVVIANKDAEARAGATELATALDRAGADVLLDDRTASPGVKFKDAELL 540

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
            +P I++ G +  ++  + +R   S   +++ +
Sbjct: 541 GVPWIVVVG-RGWADGVVELRDRFSGEKREIPV 572


>gi|212639527|ref|YP_002316047.1| prolyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
 gi|212561007|gb|ACJ34062.1| Prolyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
          Length = 568

 Score =  140 bits (353), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 47/203 (23%), Positives = 89/203 (43%), Gaps = 11/203 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E + H+ L R      I ++ SGV  +   G ++ Q + + +R +++     E+  P 
Sbjct: 21  DAEIKSHQLLLRAG---FIRQNASGVYSFLPLGKRVLQKIEAIIREEMERAGAVELLMPA 77

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY   +  +K      +  R FAL   +     A+    +KSY+ L
Sbjct: 78  LQQAELWQESGRWYSYGPELMRLKD-----RHERDFALGATHEEVITALVRDEVKSYKRL 132

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKD 417
           P+ L +  + +R+E      GL+R R F   DA+ F    +  +E   K++    ++++ 
Sbjct: 133 PLTLYQIQTKFRDEKRPRF-GLLRGREFIMKDAYSFHASHESLDEVYNKMYEAYANVFRR 191

Query: 418 FGFEKIMVKLSTRPEKRVGSDAL 440
            G     V   +       +   
Sbjct: 192 CGLNFRAVIADSGAMGGKDTHEF 214



 Score = 76.7 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 62/163 (38%), Gaps = 11/163 (6%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G +  +        NA Y++ +  +  P+++     G   R +  + E +     
Sbjct: 407 RGIEVGHVFKLGTRYSEAMNATYLDENG-RTQPMIMGCYGIGVS-RTLAAIAEQYNDEHG 464

Query: 546 --LPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              P  ++P    + ++        E A E    L+     +  D R E    K  +  +
Sbjct: 465 LIWPTAVAPFHVHLISVNPKVDEQRELADEWYVQLQQEGFEVLYDDRAERPGVKFADSDL 524

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             +P+ +  G + ASE  + ++   +  T++V +   +  L +
Sbjct: 525 IGLPVRVTVGKR-ASEGIVEVKVRKTGETEEVHVSQLVETLRR 566


>gi|15643280|ref|NP_228324.1| prolyl-tRNA synthetase [Thermotoga maritima MSB8]
 gi|81859132|sp|Q9WYY4|SYP_THEMA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|4981026|gb|AAD35599.1|AE001727_11 prolyl-tRNA synthetase [Thermotoga maritima MSB8]
          Length = 577

 Score =  140 bits (353), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 54/235 (22%), Positives = 92/235 (39%), Gaps = 11/235 (4%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
            + E   H  L R   +  +A    G+  +   G ++   + + +R ++     +EI  P
Sbjct: 16  SDVETVSHEYLLRGGFIRKVAA---GIYTYLPLGRRVLLKIENIVREEMNRIGAQEILMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW+QSG WD Y   M  +K      +  R F L P +      +  + L+SY++
Sbjct: 73  ILQPAELWKQSGRWDDYGPEMMKLKD-----RHERDFTLGPTHEEIVTDLVKNELRSYKQ 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH-NLIISIYK 416
           LP+ L +  + YR+E      GL+R R F   DA+ F    +  +E  +        I +
Sbjct: 128 LPLTLYQIANKYRDEIRPRF-GLLRAREFIMKDAYSFHASWESLDETYEQFKKAYSRIME 186

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
             G   ++++  T       S      A+     VL   K   Q         GE
Sbjct: 187 RLGVRYMIIEAETGAIGGNASHEFVVPAKIGETNVLFCEKCGYQASDEKAEYKGE 241



 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/169 (16%), Positives = 67/169 (39%), Gaps = 17/169 (10%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF----KGNLPLWLSPI 553
           +         A++++ + E   P ++    +G   R +  ++E+F        PL ++P 
Sbjct: 412 LGTKYSEAMKAYFMDENGEMK-PFIMGCYGWGVS-RTMAAVVEHFHDENGMIWPLSIAPY 469

Query: 554 QAIV---TTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
             +V       +   +  ++I  +L      +  D R  +  +K ++  +   PI I  G
Sbjct: 470 TVVVDILNMNDAEQKQVGEKIYQVLSEKGEEVVLDDREVSPGFKFKDADLIGFPIRINVG 529

Query: 611 DKEASERSIGIRRFGSTTTQKV-------SLLDAIPILTKESLPPDCQK 652
            +   E  + +++  S    KV       +LL+ +  + +E  P +  +
Sbjct: 530 -RSLKEGVVELKKRYSKELVKVNIKNGFGALLETLEKMKREYDPKEAVR 577


>gi|293977850|ref|YP_003543280.1| prolyl-tRNA synthetase [Candidatus Sulcia muelleri DMIN]
 gi|292667781|gb|ADE35416.1| prolyl-tRNA synthetase [Candidatus Sulcia muelleri DMIN]
          Length = 489

 Score =  140 bits (353), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 69/402 (17%), Positives = 146/402 (36%), Gaps = 73/402 (18%)

Query: 270 RKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCA--- 324
             G+ I++ +   + + +K   ++ +  P ++ +  + ++  H   +      +      
Sbjct: 38  PYGFSIWEKIKFILDKILKSTGHKNVYFPLLIPKSYFSKEYNHIKGFAKECAVITHYRLK 97

Query: 325 ---------DDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
                    D   K      ++P +       +   + SYR+LP+R  ++ ++ R E   
Sbjct: 98  NFNNKNIIVDKNSKLEDELIVRPTSETIIWNSYKRWINSYRDLPIRFNQWANIIRWERR- 156

Query: 376 SLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
                +R   F   + H    TK++  N+  KI N+  +  ++F    ++  + T  EK 
Sbjct: 157 -TRFFLRTSEFLWQEGHTAHSTKKEAINQAKKIINIYTNFLENFIAIPVIQGIKTYSEKF 215

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
            G++  +                                      E I++D  G+  Q  
Sbjct: 216 AGAEETY------------------------------------CIESIMQD--GKSLQIA 237

Query: 495 TIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLW 549
           T   +  N    F+  Y      K +   +    +G   R IG +I    ++    LP  
Sbjct: 238 TSHFLGQNFSKAFDVRYTTEKGNKEY---VWATSWGISTRLIGAIIMTHSDDNGLILPPK 294

Query: 550 LSPIQAIVTTITSSAVEY------AQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKK 602
           ++P+Q ++  +  +  +          +   L+   +SI+ D R   T  +K  E+ IK 
Sbjct: 295 IAPLQIVIIPVYKTQEQLNLIEKLVLPLKESLEKRGISIKYDKRTYYTPGWKFNEYEIKG 354

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKV---SLLDAIPIL 641
           IPI I  G K+    ++ + R  +   + +    L   IP +
Sbjct: 355 IPIRITIGKKDIDRGTVEVVRRDTLEKKYIIINKLEFLIPKI 396


>gi|225023763|ref|ZP_03712955.1| hypothetical protein EIKCOROL_00627 [Eikenella corrodens ATCC
           23834]
 gi|224943457|gb|EEG24666.1| hypothetical protein EIKCOROL_00627 [Eikenella corrodens ATCC
           23834]
          Length = 570

 Score =  140 bits (353), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 44/224 (19%), Positives = 82/224 (36%), Gaps = 12/224 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       E+    H+ + R      I  + SG+  W   G ++ + + + +R 
Sbjct: 3   ASQFFISTLKEAPAEAALASHKLMLRAG---LIKANASGLYTWMPMGLRVLRKVEAVVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P +    LW++SG WD Y   +  +    D       F   P      
Sbjct: 60  EMNRAGAIELLMPVIQPADLWKESGRWDFYGDELLRITDRHDNT-----FCFSPTCEELI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE- 403
             +    + SY++LP       + +R+E      G+MR R F   DA+ F    +     
Sbjct: 115 TDIVRKEITSYKQLPKNFYHIQTKFRDERRPRF-GVMRAREFVMKDAYSFHADYESLVRE 173

Query: 404 -CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
               ++N    ++   G +   V   T      GS      AE+
Sbjct: 174 GYQPMYNAYCRVFDRLGLDYRPVAADTGSIGGTGSHEFQVLAES 217



 Score = 81.8 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 32/164 (19%), Positives = 67/164 (40%), Gaps = 13/164 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGN 545
           R  + G + Q+     +  NA +++++ +     ++    +G  I R +   IE N    
Sbjct: 406 RGIEVGHVFQLRDKYSAALNASFLDNNGKSQ---IMEMGCYGIGITRIVAAAIEQNNDER 462

Query: 546 LPLW---LSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
             +W   ++P QA++  +    + +  E A +I   L +  + +  D R+E     + + 
Sbjct: 463 GIIWTNAMAPFQAVIVPMNYKKSEAVREAADKIYAELTAAGVDVLLDDRDERAGVLLADS 522

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +  IP  I  GD+   E  +      S  T+ V+  +    L 
Sbjct: 523 ELLGIPHRIAIGDRGLKEGKVEYTERRSGETELVAAGEIAAKLK 566


>gi|270295408|ref|ZP_06201609.1| uridine kinase [Bacteroides sp. D20]
 gi|270274655|gb|EFA20516.1| uridine kinase [Bacteroides sp. D20]
          Length = 557

 Score =  140 bits (353), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 43/207 (20%), Positives = 92/207 (44%), Gaps = 3/207 (1%)

Query: 1   MPSDIKLTFPDGSI-KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-S 58
           M   +++   + +I K FP+ ++  D+    + +   + V+  +N +   L+  V     
Sbjct: 1   MKHMLQICCKNNNISKEFPIGSSLLDIYYGFNLNFPYQVVSAKVNNRSEGLNFRVYNNKD 60

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           +E +   D   +     S   I+ +AV  ++PE ++ +   +  G++ +    +    ++
Sbjct: 61  VEFLDIRDSSGMRTYVRSLCFILYKAVSELFPEGKLFVEHPVSKGYFCNLRIGRSIELED 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           +  I+K+MQEIIA + P+ +      +A  +F  +    KV++LE+         Y  G+
Sbjct: 121 VTAIKKRMQEIIAENIPYHRVECHTTEAVRIFSERGMNDKVKLLET-SGSLYTYYYTLGD 179

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAG 205
             D   G  + STG +  F  +    G
Sbjct: 180 TVDYYYGNLLPSTGFIWLFDIVKYYDG 206


>gi|253699963|ref|YP_003021152.1| prolyl-tRNA synthetase [Geobacter sp. M21]
 gi|259511598|sp|C6E496|SYP_GEOSM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|251774813|gb|ACT17394.1| prolyl-tRNA synthetase [Geobacter sp. M21]
          Length = 573

 Score =  140 bits (352), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 45/220 (20%), Positives = 85/220 (38%), Gaps = 11/220 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  +        ++E   H+ + R   +  +A    G+  +   G +  + + + +R +
Sbjct: 4   SQYFIPTVKETPSDAEVISHKLMLRAGMIRKLAA---GIYNYLPFGLRSIRKVEAIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P V    LW++SG W+ Y   +       D       F + P +     
Sbjct: 61  MNRAGAIELLMPAVQPAELWKESGRWEFYGKELLRFNDRKDA-----EFCMGPTHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    ++SYR+LP+ L +    +R+E      GLMR R F   DA+ F   E   +   
Sbjct: 116 DLIRKEVRSYRQLPINLYQIQGKFRDEIRPRF-GLMRGREFIMKDAYSFDVNEAGADVSY 174

Query: 406 -KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
            K++     I++  G +   V+  T       S      A
Sbjct: 175 EKMYKAYRRIFERCGLKFRAVEADTGTIGGNYSHEFMVLA 214



 Score = 92.5 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 70/169 (41%), Gaps = 13/169 (7%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G +  +         A ++++  ++   + +     G   R +   IE       
Sbjct: 405 RGIEVGHVFKLGTKYSKALKATFLDADGKEQT-IFMGCYGIGV-GRTVAACIEQNHDENG 462

Query: 546 --LPLWLSPIQAIV--TTITSSAVEYAQE-IANLLKSHHLSIETDFRNETINYKIREHSI 600
              P+ ++P Q I+   ++    V+ A E I   L    + +  D R+E   +K ++  +
Sbjct: 463 IIFPIPIAPFQCIISSLSVKEDEVKAASESIYQELLEAGIEVLLDDRDERPGFKFKDADL 522

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT---KESL 646
             IP+ I+ G K  +E  + ++   S   + + + +AI  +    KE+L
Sbjct: 523 IGIPLRIVVGAKALAEGKVELKERRSGEVEVLPIAEAIAKVKAAVKEAL 571


>gi|299739951|ref|XP_001840374.2| proline-tRNA ligase [Coprinopsis cinerea okayama7#130]
 gi|298404017|gb|EAU81430.2| proline-tRNA ligase [Coprinopsis cinerea okayama7#130]
          Length = 718

 Score =  140 bits (352), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 69/414 (16%), Positives = 139/414 (33%), Gaps = 72/414 (17%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRAN 317
              SG        + I++ + ++   +IK    +    P  + Q + + +  H + +   
Sbjct: 234 YSVSGCYILKPWSYSIWEEIQTWFNAEIKKLGVQNSYFPMFVSQSVLEREKDHIEGFSPE 293

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAV--------FNHGLKSYRELPVRLAEFGSVY 369
           +  V  A  +  +    A++P +      +        +   ++S+R+LP++L ++ SV 
Sbjct: 294 VAWVTRAGQSDLE-EPIAIRPTSETAMYPLSPSNPPPDYAKWIRSHRDLPLKLNQWNSVV 352

Query: 370 RNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLS 428
           R E        +R R F   + H  F TKE+   E  +I +L   +Y+D           
Sbjct: 353 RWEFKNP-QPFLRTREFLWQEGHTAFLTKEEADTEVRQILDLYRQVYEDL---------- 401

Query: 429 TRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIG 488
                                     +       I +      G  Y    E  +  + G
Sbjct: 402 --------------------------LAVPVIPGIKSEKEKFAGGLYTTTLEGFIPTS-G 434

Query: 489 RDWQCGTIQVDFNL---PSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           R  Q  T          P  FN F  +  +       + +  +G   R IG+ +     N
Sbjct: 435 RGIQAATSHCLGQNFSRPEMFNIFVEDPENPGKK--YVWQNSWGLSTRAIGVCVMVHGDN 492

Query: 546 LPLWLSPI---------QAIVTTITSS-----AVEYAQEIANLLKSHHLSIETDFRNE-T 590
             L L P             +T  TS        +  + +A+ L+   +  + D R+  T
Sbjct: 493 QGLVLPPRVASVQVVVVPCGITAKTSDEERKRINDACEALASKLREGDIRAKADLRDGYT 552

Query: 591 INYKIREHSIKKIPIIIICGDKEASER-SIGIRRFGSTTTQKVSLLDAIPILTK 643
             +K  E   K +P+ +  G ++  +  ++ +R   +     + L      +  
Sbjct: 553 PGWKFNEWEQKGVPVRLEIGPQDIKKNQTLSVR-RDTGVKAPLPLDGITATVQD 605


>gi|288928843|ref|ZP_06422689.1| phosphoribulokinase family protein [Prevotella sp. oral taxon 317
           str. F0108]
 gi|288329827|gb|EFC68412.1| phosphoribulokinase family protein [Prevotella sp. oral taxon 317
           str. F0108]
          Length = 553

 Score =  140 bits (352), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 45/242 (18%), Positives = 95/242 (39%), Gaps = 3/242 (1%)

Query: 1   MPSDIKLTFPDGSIKN-FPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-S 58
           M   I++   +        + +T  DV   +  ++    V   +N K+  +   +     
Sbjct: 1   MKQSIQIRCKNNKKTAKVEIGSTLYDVFHELKLNMPYGPVNAKVNNKIEGMHYRLYHNKD 60

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           +E +    P +L     +   ++ +AV  ++P   V I   + +G+Y D D ++P +  +
Sbjct: 61  VEFLDLHSPSALRAYTRTLFFVLCKAVHDLYPHSNVVIDIPVSNGYYVDLDIQRPITPQD 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
              I ++MQEIIA   P  +   + + A  +F+   +  KV +LE++      T Y    
Sbjct: 121 ADAIRRRMQEIIAARLPISRHETTTDAAIAMFKKVGDESKVRLLETV-GTLYTTYYELDR 179

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D   G  + +T ++  F       G   R  S             +   E+ +  +  
Sbjct: 180 YVDYYYGSLLTNTRELHLFGLEPYYDGLLLRVPSTHNPAQLGELVRQDKMFEIFKEHHRW 239

Query: 239 EE 240
           ++
Sbjct: 240 QQ 241


>gi|113475053|ref|YP_721114.1| prolyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
 gi|123161090|sp|Q116D3|SYP_TRIEI RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|110166101|gb|ABG50641.1| prolyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
          Length = 601

 Score =  140 bits (352), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 56/296 (18%), Positives = 108/296 (36%), Gaps = 15/296 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  L        E+E   H+ L R   +  I   G+G+  +     ++   + + +R +
Sbjct: 4   SQMLLVTLRDDPAEAEIPSHKLLIRAGYIRRI---GNGIYAYLPLMLRVINKVSTIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E   PQ+    LWQ+SG WD+Y      +    D  +  R   L P +     
Sbjct: 61  MNATGAQECLLPQLQPAELWQESGRWDTYTQAEGIMFSLID--RQNRELGLGPTHEEVIT 118

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    ++SYR+LP+ L +  + +R+E      GLMR R F   D + F   E+   +  
Sbjct: 119 TIAKDIIRSYRQLPIHLYQLQTKFRDEIRPRF-GLMRGREFIMKDGYSFHADEESLKKTY 177

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDT----IKNSSQ 460
           + +     ++ +  G +   V   +       S      A+     +L T       + +
Sbjct: 178 QDMDKAYRNMLRRSGLQFRAVDADSGAIGGSASQEFMVLADAGEDEILYTQDGKYAANME 237

Query: 461 DRINTGVLLGEGAFYGP-KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS 515
             I+  V +    F    K E    + I  +  C  +        +   +     +
Sbjct: 238 KAISLPVDVEASPFDTYDKLETPGTETI--EKMCEFLHCSATNIVKNVLYQAVYDN 291



 Score = 76.0 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 24/162 (14%), Positives = 56/162 (34%), Gaps = 9/162 (5%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I Q+         A Y N   ++  P+++     G        + +++  +  
Sbjct: 435 RGIEVGHIFQLGTKYSEAMGATYTNEQGQEV-PLLMGCYGVGVSRLAQAAVEQSYDKDGI 493

Query: 548 LWL---SPIQAIV-TTITSS--AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W    +P   ++          +E A  +   L    +    D R+E    K ++  + 
Sbjct: 494 IWPVAIAPYHVVICIPNIKDTQQIEVAGNLYKELNEAGIDTILDDRDERAGVKFKDADLI 553

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            IP  I+ G +      + +    +   Q++ +   +  L  
Sbjct: 554 GIPYRIVTG-RSLKSGKVELIERSTHQCQEIVVAQVLSTLKD 594


>gi|226327022|ref|ZP_03802540.1| hypothetical protein PROPEN_00883 [Proteus penneri ATCC 35198]
 gi|225204240|gb|EEG86594.1| hypothetical protein PROPEN_00883 [Proteus penneri ATCC 35198]
          Length = 571

 Score =  140 bits (352), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 47/245 (19%), Positives = 95/245 (38%), Gaps = 11/245 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +   L+       ++E   H+ + R   +  +A   SG+  W   G ++ + +   +R 
Sbjct: 3   TSHYLLSTLKETPADAEIVSHQLMLRAGMIRKLA---SGLYDWMPTGVRVLRKIEKIVRE 59

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      EI+ P V    LW +SG W+ Y   +       +     R F L P +    
Sbjct: 60  EMDNAGSLEISMPVVQPADLWLESGRWEQYGPELLRFSDRGE-----RPFVLGPTHEEVV 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNE 403
             +  + + SY++LP+ L +  + +R+E      G+MR R F   DA+ F  ++E +   
Sbjct: 115 TDIVRNEITSYKQLPLNLYQIQTKFRDEVRPRF-GVMRSREFIMKDAYSFHISQESLQET 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             +++     I+   G +   V   T       S      A++    ++ +  +     I
Sbjct: 174 YDRMYEAYSKIFSRIGLDFRPVLADTGSIGGNASHEFQVLADSGEDDIVFSTGSDYAANI 233

Query: 464 NTGVL 468
                
Sbjct: 234 ELAEA 238



 Score = 88.7 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 58/168 (34%), Gaps = 13/168 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           I R  + G I Q+         A   N      H  ++    +G  I R +   IE    
Sbjct: 405 IKRGIEVGHIFQLGTKYSEALKATVQNEEG---HNQIVTMGCYGIGITRIVAAAIEQNHD 461

Query: 545 N----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                 P  ++P Q  +  +         E A  + N L++  + +  D R E       
Sbjct: 462 ARGIIWPDAIAPFQVAILPMNMHRSYRVKEVADRLYNELRAQGIDVLFDDRKERPGVMFA 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  +  IP  I+ GD+      I  +   S     V++ D +  + ++
Sbjct: 522 DMELIGIPHTIVIGDRNLDNNQIEYKARRSDDKSLVNVDDVVAFIKEQ 569


>gi|332983243|ref|YP_004464684.1| prolyl-tRNA synthetase [Mahella australiensis 50-1 BON]
 gi|332700921|gb|AEE97862.1| prolyl-tRNA synthetase [Mahella australiensis 50-1 BON]
          Length = 569

 Score =  140 bits (352), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 49/240 (20%), Positives = 98/240 (40%), Gaps = 11/240 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++   T       E+E   H+ + R   +  +A   SG+  +   G ++ + +   +R +
Sbjct: 4   SEMFFTTLRETPSEAEIPSHQLMLRAGLMRKLA---SGIYNYLPLGKRVLKKVEEIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +EI    +L   LW+++G WD +   MF +K  ++     R F L P +     
Sbjct: 61  MDKTGAQEILASALLPAELWKETGRWDVFGPEMFKLKDRNE-----REFCLGPTHEEIFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +  + +KSY++LP  L +  + YR+E      G+MR R F   DA+ F    + +    
Sbjct: 116 DIVRNEIKSYKQLPFNLYQIQTKYRDEKRPRF-GVMRSREFIMKDAYSFDKDWDGLDISY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            K+++   +I+     +  +V   T       S+     ++     V    +      I 
Sbjct: 175 KKMYDAYCAIFDRCDLKYWVVDADTGAMGGKDSNEFMVSSDVGEAEVAYCDECGYAANIE 234



 Score = 89.1 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 65/175 (37%), Gaps = 9/175 (5%)

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
            PK    +  A G +      ++         A Y++ + ++  P+++     G      
Sbjct: 392 CPKCGKPINIARGIEV-GHIFKLGTKYTEALGATYLDENGQEQ-PIIMGCYGIGINRTVA 449

Query: 536 GIMIENFKGNLPLWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNE 589
            I+ ++      +W    +P   I+   +      ++ A++I   L S  + +  D R+E
Sbjct: 450 AIIEQHHDDRGIIWPMSVTPYHVIIVVASNYQPEQIQAAEKIHYELVSRGIEVLLDDRDE 509

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
               K  +  +  IPI I  G K  S   +  +R     +  + + D +  +  E
Sbjct: 510 RAGVKFNDADLIGIPIRITVGKK-ISAGMVEFKRRDKADSIDIPVSDIVDKVIAE 563


>gi|257068210|ref|YP_003154465.1| prolyl-tRNA synthetase [Brachybacterium faecium DSM 4810]
 gi|256559028|gb|ACU84875.1| prolyl-tRNA synthetase, family II [Brachybacterium faecium DSM
           4810]
          Length = 594

 Score =  140 bits (352), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 37/212 (17%), Positives = 78/212 (36%), Gaps = 11/212 (5%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
           +        ++E   H+ L R   +       +GV  W   G K+ + +   +R +    
Sbjct: 9   IRTLREDPADAEVASHKLLVRAGYIR---RSAAGVYTWLPLGLKVLRKVEQIVREEQDAI 65

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
             +E+    +  +  ++ +G W+ Y  N+F ++           + L P +         
Sbjct: 66  GGQEVLFSALQPREPYEATGRWEDYGPNLFRLQDRKQD-----DYLLAPTHEEMFTLTVK 120

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
               SY++LP  L +  + YR+E      GL+R R F   DA+ F   ++  +   +   
Sbjct: 121 DLFSSYKDLPTMLYQIQAKYRDEARPR-AGLLRTREFLMKDAYSFDVDDEGLDASYEKQR 179

Query: 410 L-IISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           L     ++  G   ++ +          S+  
Sbjct: 180 LAYQRTFERLGLPTVICRADAGAMGGSRSEEF 211



 Score = 81.0 bits (198), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 27/165 (16%), Positives = 62/165 (37%), Gaps = 13/165 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN- 545
           R  + G I Q+            ++ + +    V++    +G  + R I  + E      
Sbjct: 430 RGMEMGHIFQLGRTYAEALGLKVLDENGKS---VVVTMGSYGIGVTRAIAAVAELCHDEK 486

Query: 546 ---LPLWLSPIQAIVTTITSSAVEYAQE--IANLLKSHHLSIETDFRNE-TINYKIREHS 599
               P  L+P    +         +A+   IA  L++  L +  D R + +   K ++  
Sbjct: 487 GLCWPRQLAPADVHIVATGKDPAIFAEAERIAGALEARGLEVLYDDRPKVSPGVKFKDSE 546

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  +P  ++ G +  +   + +R       ++VS  + +  +T E
Sbjct: 547 LLGVPTSVVVG-RGLATGVVEVRDRAGGEIREVSPEEVVDAVTAE 590


>gi|294788637|ref|ZP_06753879.1| proline--tRNA ligase [Simonsiella muelleri ATCC 29453]
 gi|294483514|gb|EFG31199.1| proline--tRNA ligase [Simonsiella muelleri ATCC 29453]
          Length = 571

 Score =  140 bits (352), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 42/218 (19%), Positives = 80/218 (36%), Gaps = 12/218 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       E+    H+ + R      I  + SG+  W   G ++ + + + +R 
Sbjct: 3   ASQFFISTLKEAPAEATLASHKLMLRAG---LIKANASGLYTWMPMGLRVLRKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P +    LW++SG W  Y   +  +    D       F   P      
Sbjct: 60  EMNRVGCVELLMPVIQSADLWKESGRWQFYGDELLRITDRHDN-----EFCFSPTCEEMI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
             +    + SY++LP       + +R+E      G+MR R F   DA+ F    E +  +
Sbjct: 115 TDIVRKEINSYKQLPKNFYHINTKFRDERRPRF-GVMRAREFVMKDAYSFHADFESLVRD 173

Query: 404 CLK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
             + +++    I+   G     V   T      GS   
Sbjct: 174 GYQPMYDAYCRIFNRLGLNFRPVAADTGSIGGTGSHEF 211



 Score = 83.3 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 25/165 (15%), Positives = 66/165 (40%), Gaps = 13/165 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGN 545
           R  + G + Q+        NA +++++ +     ++    +G  + R +   IE N    
Sbjct: 406 RGIEVGHVFQLRTKYSEAMNATFLDNNGKSQ---IMEMGCYGIGVTRVVAAAIEQNNDEK 462

Query: 546 LPLW---LSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
             +W   ++P   ++  +    ++     A +I   L +  + +  D R+E     + + 
Sbjct: 463 GIIWTDAMAPFTVVIVPMNYKKSADVKAAADKIHAELLAQGVDVLLDDRDERAGVLLADS 522

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +  IP  I+ GD+   E ++         +Q +++ + +  +  
Sbjct: 523 ELLGIPHRIVIGDRALKEGNVEYAERKVGESQSIAVNEIVGKIKN 567


>gi|326333619|ref|ZP_08199856.1| proline--tRNA ligase [Nocardioidaceae bacterium Broad-1]
 gi|325948525|gb|EGD40628.1| proline--tRNA ligase [Nocardioidaceae bacterium Broad-1]
          Length = 582

 Score =  140 bits (352), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 98/259 (37%), Gaps = 21/259 (8%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
           +        ++E   H+ L R   +        G+  W   G ++   +   +R ++   
Sbjct: 6   VRTLREDPADAEVASHKLLVRAGYIR---RAAPGIYSWLPLGLRVLGKVEQIIREEMASI 62

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
             +E++ P +L +  ++ +G W  Y   +F +K   +       + L P +      +  
Sbjct: 63  GSQEVHFPALLPREPYEATGRWTEYGDGIFRLKDRKEA-----DYLLGPTHEEMFTLLVK 117

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
               SY++LP+ + +  + YR+E      GL+R R F   D++ F   ++      + H 
Sbjct: 118 DLYGSYKDLPLSIYQIQTKYRDEARPR-AGLLRGREFIMKDSYSFDVTDEGLEAAYQAHR 176

Query: 410 -LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN----------IMKGVLDTIKNS 458
              + ++   GFE ++VK ++       S+     +E                ++ +   
Sbjct: 177 DAYVRVFDRLGFEYVIVKATSGAMGGSASEEFLAVSEAGEDTFVRSPGGYAANVEAVTTL 236

Query: 459 SQDRINTGVLLGEGAFYGP 477
           + + I+   +    A   P
Sbjct: 237 APEPISYEGVPAAHAEDTP 255



 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 39/247 (15%), Positives = 87/247 (35%), Gaps = 32/247 (12%)

Query: 426 KLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI-------NTGVLLGEGAFYGP- 477
           K ++  +  +G + L + +E+ ++ ++D    +    +          + L  G  + P 
Sbjct: 335 KHASLVKGYIGPEVLGEKSESGIRYLVDPRVVTGTRWVTGANVEGKHVIDLVAGRDFTPD 394

Query: 478 -KFEY-------ILKDAIG-----RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMI 523
              E           D  G     R  + G + Q+            ++ + +     M 
Sbjct: 395 GTIEAAEVREGDPAPDGSGPLTLARGIEMGHVFQLGRKYADALGLQVLDENGKLVTVTMG 454

Query: 524 HRAVFGSIERFIGIMIENF----KGNLPLWLSPIQAIVTTITSS--AVEYAQEIANLLKS 577
              +   + R +  + E          P  ++P    +          E A  +A  L++
Sbjct: 455 SYGI--GVTRAVAAIAEGTLDEIGLAWPRNVAPYDVHLVATGKDSAVFEAAATLAEELEA 512

Query: 578 HHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
             + +  D R + +   K ++  +  +P I+  G K   E  I ++   S    +V+L D
Sbjct: 513 AGIDVLYDDRPKVSPGVKFKDAELIGVPTIVTVG-KGLVEGKIEVKDRKSGEKTEVALAD 571

Query: 637 AIPILTK 643
           A+  LT+
Sbjct: 572 AVAHLTE 578


>gi|29347937|ref|NP_811440.1| uridine kinase [Bacteroides thetaiotaomicron VPI-5482]
 gi|253572528|ref|ZP_04849930.1| uridine kinase [Bacteroides sp. 1_1_6]
 gi|298387819|ref|ZP_06997369.1| phosphoribulokinase family protein [Bacteroides sp. 1_1_14]
 gi|29339839|gb|AAO77634.1| uridine kinase (uridine monophosphokinase) [Bacteroides
           thetaiotaomicron VPI-5482]
 gi|251837943|gb|EES66032.1| uridine kinase [Bacteroides sp. 1_1_6]
 gi|298259424|gb|EFI02298.1| phosphoribulokinase family protein [Bacteroides sp. 1_1_14]
          Length = 557

 Score =  140 bits (352), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 43/207 (20%), Positives = 94/207 (45%), Gaps = 3/207 (1%)

Query: 1   MPSDIKLTFPDGSI-KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-S 58
           M   +++   + +I K FP+ ++  D+    + +   + V+  +N +   L+  V     
Sbjct: 1   MKQMLQICCKNNNIYKEFPIGSSLLDIYYGFNLNFPYQVVSAKVNNRSEGLNFKVYNNKD 60

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           IE +   D   +     S   ++ +AV  ++PE ++ +   +  G++ +    +P + ++
Sbjct: 61  IEFLDVRDSSGMRTYVRSLCFVLFKAVSELFPEGKLFVEHPVSKGYFCNLRIGRPITLED 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           + +I+++MQEIIA +  + +      +A  +F  +    KV +LE+         Y  G+
Sbjct: 121 VTRIKQRMQEIIAENISYHRIECHTAEAVRVFSERGMNDKVRLLET-SGSLYTYYYTLGD 179

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAG 205
             D   G  + STG +K F  +    G
Sbjct: 180 TVDYYYGNLLPSTGYIKLFDIVKYYDG 206


>gi|312795091|ref|YP_004028013.1| Prolyl-tRNA synthetase [Burkholderia rhizoxinica HKI 454]
 gi|312166866|emb|CBW73869.1| Prolyl-tRNA synthetase (EC 6.1.1.15) [Burkholderia rhizoxinica HKI
           454]
          Length = 589

 Score =  140 bits (352), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 46/207 (22%), Positives = 82/207 (39%), Gaps = 11/207 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ + R   +  +A    G+  +   G +  + + + +R ++      E+  P 
Sbjct: 28  DAEIVSHQLMVRAGMIRRVA---GGIYNYMPIGLRSIRKVEAIVREEMNRAGAVELLMPA 84

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    LWQ+S  W+ Y   +  VK   D     R F + P +      +    +KSYR++
Sbjct: 85  VQPAELWQESSRWEQYGPELLRVKDRHD-----RDFVVGPTHEEVVTDIARKEIKSYRQM 139

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKD 417
           PV   +  + +R+E      G+MR R F   DA+ F            K+++  + I+  
Sbjct: 140 PVNFYQVQTKFRDEIRPRF-GVMRGREFIMKDAYSFDRDRAGLQLSYQKMYDAYVRIFTR 198

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDA 444
            G E   V          GS      A
Sbjct: 199 LGLEFRAVAADNGAIGGTGSHEFHVIA 225



 Score = 83.7 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 26/164 (15%), Positives = 60/164 (36%), Gaps = 11/164 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G + Q+         A +++ + +   P+M+     G I R +G  IE       
Sbjct: 420 RGIEVGHVFQLGTKYSEAMGATFLDENGKPA-PMMMGCYGIG-ITRILGAAIEQNFDERG 477

Query: 546 --LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
              P  ++P   ++  +    + +  E A ++ + L    + +  D R E       +  
Sbjct: 478 IIWPEAIAPFHLVLCPMGYERSDAVREQAHKLYDELLGAGMDVILDDRGERPGVMFADWE 537

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  +P  ++ G++   E  I  +         + L  A   + +
Sbjct: 538 LIGVPHRLVIGERGLKEGKIEYQGRRDVEPTLLPLEQAAAWVVE 581


>gi|118580173|ref|YP_901423.1| prolyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
 gi|166980138|sp|A1APU5|SYP_PELPD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|118502883|gb|ABK99365.1| prolyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
          Length = 576

 Score =  140 bits (352), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 42/220 (19%), Positives = 82/220 (37%), Gaps = 11/220 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++E   H+ + R   +  +A    G+  +   G +  +   + +R +
Sbjct: 4   SRYFIPTIKETPSDAEVVSHQLMLRAGMIRKLAA---GIYNYLPLGLRSIRKFEAIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P V    LW++SG W  Y   +   +   D       F + P +     
Sbjct: 61  MNRAGAIEMLMPSVQPAELWEESGRWSFYGKELLRFRDRKDG-----EFCMGPTHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    +KSYR++PV   +  + +R+E      GLMR R F   DA+ F       +   
Sbjct: 116 DMVRREIKSYRQMPVNFYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSFDVDSAAADGSY 174

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
           + +    + I++  G     V+  T       S      A
Sbjct: 175 ELMFQAYMRIFERCGLNFRAVEADTGTIGGSSSHEFMVLA 214



 Score = 80.2 bits (196), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 32/164 (19%), Positives = 68/164 (41%), Gaps = 12/164 (7%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN- 545
           R  + G +  +         A Y+++  ++    +I    +G  I R +   IE    + 
Sbjct: 406 RGIEVGHVFKLGTKYSQALGATYLDADGKEQ---VIFMGCYGIGIGRTVAAAIEQNHDDN 462

Query: 546 ---LPLWLSPIQAIVTTITSS---AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
               PL L+P    V  + +     +  A+E+   L+   + +  D R+E    K +++ 
Sbjct: 463 GIIFPLPLAPFHCSVVALNTKDKGVMAAAEEMYFRLEQQGIEVLFDDRDERPGVKFKDND 522

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  IP+ I+ G K  SE  + ++   S     +S  +A+  + +
Sbjct: 523 LIGIPLRIVVGSKGLSEGKVEVKIRASGEMLLLSPDEAVETIVR 566


>gi|227833360|ref|YP_002835067.1| Prolyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
 gi|262184346|ref|ZP_06043767.1| prolyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
 gi|254782894|sp|C3PH25|SYP_CORA7 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|227454376|gb|ACP33129.1| Prolyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
          Length = 589

 Score =  140 bits (352), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 49/254 (19%), Positives = 94/254 (37%), Gaps = 22/254 (8%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +  +A    GV  W   G +  + +   +R+++     +E+  P 
Sbjct: 19  DAEVPSHKLLVRAGYVRRVA---PGVYTWLPLGLRAMRKIEDVIRQEMNAIGGQEMLFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  +++S  W  Y  N+F +K      +      L P +             SY++ 
Sbjct: 76  LLPREPYEESNRWTEYGDNLFRLKD-----RKGADMLLGPTHEEMFTTAVKDMYSSYKDF 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKD 417
           PV L +  + YR+E       L R R FT  D++ F   ++  +E    H     +I+  
Sbjct: 131 PVTLYQIQTKYRDEERPRAGVL-RGREFTMKDSYSFDMTDEGLDESYARHRKAYQNIFDR 189

Query: 418 FGFEKIMVKLSTRPE-----------KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
              +  + K ++                VG D      E      ++ +   + + I+  
Sbjct: 190 LEIDYAICKATSGAMGGSASEEFLAVSEVGEDTFVRATEGEYAANVEAVVTQAPEEISFE 249

Query: 467 VLLGEGAFYGPKFE 480
            L        PK E
Sbjct: 250 GLPEAQEHETPKSE 263



 Score = 82.9 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 67/163 (41%), Gaps = 12/163 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG--- 544
           R  + G I Q+       F+   ++ + ++  P M    +   + R + ++ E       
Sbjct: 427 RGIELGHIFQLGRKYTEAFDVQILDENGKRAVPTMGSYGI--GVTRMLAVLAEQRHDEKG 484

Query: 545 -NLPLWLSPIQAIVTTITSSA--VEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSI 600
            N P+ ++P Q  V      A  +E  Q++   L    + +  D R + +   K ++  +
Sbjct: 485 LNWPVAVAPYQVHVAVANKDAAALEAGQKLVEDLDRAGIEVLYDDRPKVSPGVKFKDAEL 544

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             +P I I G +  ++  I +R  G   T++V     +  LT+
Sbjct: 545 LGMPFIAILG-RAFADGIIELRIRGG-ETREVPADSIVDTLTE 585


>gi|222099131|ref|YP_002533699.1| Prolyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
 gi|254782923|sp|B9KBD7|SYP_THENN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|221571521|gb|ACM22333.1| Prolyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
          Length = 577

 Score =  140 bits (352), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 52/236 (22%), Positives = 94/236 (39%), Gaps = 11/236 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
            Q           + E   H  L R   +  +A    G+  +   G ++   + + +R +
Sbjct: 4   KQLYAPTLKETPSDVETVSHEYLLRGGFIRKVAA---GIYTYLPLGRRVLLKIENIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +EI  P +    LW++SG WD Y   M  +K      +  R F L P +     
Sbjct: 61  MNRIGAQEILMPILQPAELWKRSGRWDDYGPEMMKLKD-----RHERDFTLGPTHEEIVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +  + L+SYR+LP+ + +  + YR+E      GL+R R F   DA+ F +  +  +E  
Sbjct: 116 DLVKNELRSYRQLPLVVYQVANKYRDEIRPRF-GLLRAREFIMKDAYSFHSSWESLDETY 174

Query: 406 KIH-NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQ 460
           ++       I +  G + ++++  T       S      A+     VL   K   Q
Sbjct: 175 ELFKEAYSRIMERLGVKYMVIEAETGAIGGNASHEFVVPAKIGETNVLYCEKCGYQ 230



 Score = 70.6 bits (171), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 62/167 (37%), Gaps = 17/167 (10%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF----KGNLPLWLSPI 553
           +         A++++ + E   P ++    +G   R +  ++E+F        PL ++P 
Sbjct: 412 LGTKYSEAMEAYFMDENGEMK-PFIMGCYGWGVS-RTMAAVVEHFHDENGMIWPLSIAPY 469

Query: 554 QAIV---TTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
             IV              +EI   L      +  D R  +  +K ++  +   PI I  G
Sbjct: 470 TVIVDILNMNDPDQKRVGEEIYRALLEKGEEVVLDDREVSPGFKFKDADLIGFPIRINVG 529

Query: 611 DKEASERSIGIRRFGSTTTQKVSLL-------DAIPILTKESLPPDC 650
            +   +  I +++  S    KVS+        +A+  +  E  P + 
Sbjct: 530 -RSLKDGVIELKKRYSKELVKVSIQNGLGSLFEALNRMKAEYDPREA 575


>gi|209521097|ref|ZP_03269827.1| prolyl-tRNA synthetase [Burkholderia sp. H160]
 gi|209498480|gb|EDZ98605.1| prolyl-tRNA synthetase [Burkholderia sp. H160]
          Length = 578

 Score =  140 bits (352), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 45/207 (21%), Positives = 84/207 (40%), Gaps = 11/207 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ + R   +  +A    G+  +   G +  + + + +R ++      E+  P 
Sbjct: 17  DAEIISHKLMVRAGMIRRVA---GGIYNYLPVGLRSIRKVEAIVREEMNRAGGIELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    LWQ+SG W+ Y   +   K      +    F + P +      +  + +KSYR+L
Sbjct: 74  VQPAELWQESGRWEKYGPELLRFKD-----RKQADFVMGPTHEEVVTDIARNQIKSYRQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKD 417
           PV   +  + +R+E      G+MR R F   D++ F    E +     K+++  + I+  
Sbjct: 129 PVNFYQIQTKFRDEIRPRF-GVMRGREFIMKDSYSFDKDAEGLRESYRKMYDAYVRIFTR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDA 444
            G E   V          GS      A
Sbjct: 188 LGLEFRAVAADNGSIGGSGSHEFHVIA 214



 Score = 83.7 bits (205), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 29/158 (18%), Positives = 61/158 (38%), Gaps = 11/158 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNL 546
           R  + G + Q+        NA  ++   +   P+ +     G I R +G  IE NF    
Sbjct: 409 RGIEVGHVFQLGTKYSEAMNATCLDETGKP-RPMEMGCYGIG-ITRILGAAIEQNFDEKG 466

Query: 547 PLWL---SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
            +W    +P + ++  +    + +  E A ++   L +  + +  D R E       +  
Sbjct: 467 IIWPESIAPFEVVLCPMGYDRSDAVREQADKLYAELVAAGIDVILDDRGERPGVMFADWE 526

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
           +  +P  ++ GD+   +  I  +    T    + + DA
Sbjct: 527 LIGVPHRLVIGDRGLKDGKIEYQGRRDTEATLLPVEDA 564


>gi|319900832|ref|YP_004160560.1| uridine kinase [Bacteroides helcogenes P 36-108]
 gi|319415863|gb|ADV42974.1| uridine kinase [Bacteroides helcogenes P 36-108]
          Length = 557

 Score =  140 bits (352), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 46/207 (22%), Positives = 94/207 (45%), Gaps = 3/207 (1%)

Query: 1   MPSDIKLTFPDGSI-KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-S 58
           M   +++   + +I K F + ++  ++    + +   + V+  +N +   L+  V     
Sbjct: 1   MKHMLQICCKNNNISKEFTIGSSLLEIYYGFNLNFPYQVVSAKVNNRSEGLNFRVYNNKD 60

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           +E +   D   +     S   I+ +AV  ++PE ++ +   +  G++ +    +P   ++
Sbjct: 61  VEFLDVRDSSGMRTYVRSLCFILYKAVNELFPEGKLFVEHPVSKGYFCNLRLGRPIELED 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           +A I+K+MQEIIA D P+ +      +A  +F  +    KV++LE+         Y  G+
Sbjct: 121 VAAIKKRMQEIIAEDIPYHRVECHTAEAVRIFSERGMNDKVKLLET-SGSLYTYYYMLGD 179

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAG 205
             D   G  + STG VK F  +    G
Sbjct: 180 TVDYYYGNLLPSTGFVKMFDIVKYYGG 206


>gi|189424968|ref|YP_001952145.1| prolyl-tRNA synthetase [Geobacter lovleyi SZ]
 gi|226701293|sp|B3E1X5|SYP_GEOLS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|189421227|gb|ACD95625.1| prolyl-tRNA synthetase [Geobacter lovleyi SZ]
          Length = 576

 Score =  140 bits (352), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 46/220 (20%), Positives = 79/220 (35%), Gaps = 11/220 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           TQ  +        ++E   H+ + R   +  IA    G+  +   G +  +     +R +
Sbjct: 4   TQFFIPTLKETPSDAEVVSHQLMMRSGMIRKIAA---GIYTYMPLGLRSIRKFEQIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P V    LW +S  W  Y   +   K   D       F + P +     
Sbjct: 61  MNRAGAIELLMPGVQPAELWIESKRWAQYGKELLRFKDRKDN-----EFCMGPTHEEIIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    +KSYR++PV   +  + +R+E      GLMR R F   DA+ F       +   
Sbjct: 116 DIARREVKSYRQMPVNFYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSFDVDSSAADLSY 174

Query: 406 -KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
            K++     I++  G     V+  T       S      A
Sbjct: 175 DKMYQAYNRIFERCGLNFRAVEADTGSIGGSASHEFMVLA 214



 Score = 87.1 bits (214), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 36/163 (22%), Positives = 69/163 (42%), Gaps = 13/163 (7%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN- 545
           R  + G +  +     S  NA Y++   ++    +I    +G  I R +   IE      
Sbjct: 405 RGIEVGHVFKLGTKYSSSMNATYLDKDGKEQ---IIFMGCYGIGIGRTVAASIEQNHDEN 461

Query: 546 ---LPLWLSPIQAIVTTIT----SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
               PL L+P    V  I      + +  AQ+I + L++  + +  D R+E    K ++H
Sbjct: 462 GVIWPLPLAPFHCSVVAINAQKDEAVMAAAQDIHDRLEAAGVEVLLDDRDERPGVKFKDH 521

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            +  IP+ I+ G K  +E ++  ++      Q ++   AI  +
Sbjct: 522 DLIGIPLRIVVGGKNLAEGNVEFKQRAGGEMQLLAPEQAIESV 564


>gi|329936661|ref|ZP_08286368.1| prolyl-tRNA synthetase [Streptomyces griseoaurantiacus M045]
 gi|329303891|gb|EGG47774.1| prolyl-tRNA synthetase [Streptomyces griseoaurantiacus M045]
          Length = 564

 Score =  139 bits (351), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 56/325 (17%), Positives = 122/325 (37%), Gaps = 21/325 (6%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++E   H+ L R   +     + +G+  W   G K+   +   +R +
Sbjct: 8   SRLLVKTLRDDPADAETLSHKLLVRAGYVR---RNSAGIWSWLPLGKKVLDNVSRVVREE 64

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E+  P +L +  ++ S  W+ Y   +F +K      +    + L P +     
Sbjct: 65  MDAIGAQEVLLPALLPKEPYEASARWEEYGDLLFRLKD-----RKGGEYLLGPTHEEIFT 119

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            V    + SY++LPV L +  + YR+E      G++R R F   D++ F T ++   E  
Sbjct: 120 LVVKDQVSSYKDLPVMLYQIQTKYRDEARPR-SGVLRGREFQMKDSYSFDTTDEGLAESY 178

Query: 406 KIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA---ENIMKGVLDTIKNSSQD 461
           ++H      I+   G +  +V   +       S+     A   E+      +    ++ +
Sbjct: 179 RLHREAYQKIFARLGLDYRIVSAVSGAMGGSASEEFLAPAAAGEDTFVDCPNCDYAANTE 238

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
            +   +   EGA +    E    D    +     + V  +   +     V+         
Sbjct: 239 AVTFALTPVEGAAHPAAEELDTPDTPTIESLAELLGVPASATLKNLLVKVDGE------- 291

Query: 522 MIHRAVFGSIERFIGIMIENFKGNL 546
           ++   V G+ E  +G + E+    +
Sbjct: 292 IVAVGVPGNREVDLGKLGEHLAPAV 316



 Score = 88.7 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 67/174 (38%), Gaps = 12/174 (6%)

Query: 476 GPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
            PK    LK  + R  + G I Q+       F    +  + +     M    +   + R 
Sbjct: 395 CPKCGTGLK--LDRAIEIGHIFQLGRKYADTFQLDVLGQNGKPVRVTMGSYGI--GVSRA 450

Query: 535 IGIMIENFKGNLPL-WL---SPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNE 589
           +  + E       L W    +P    V     +   E A +++  L +  + +  D R+ 
Sbjct: 451 VAALAEQHADEQGLYWPKEIAPADVHVVAAGKALQTELALDVSEKLAAAGVRVLVDERSG 510

Query: 590 -TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +   K  +  +  +P I++ G + + E  + ++   +   +++++ +AI  LT
Sbjct: 511 VSPGVKFTDAELIGVPQILVAGRR-SGEGVVELKDRRTGEREELTVEEAIARLT 563


>gi|302379784|ref|ZP_07268268.1| proline--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
 gi|302312372|gb|EFK94369.1| proline--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
          Length = 576

 Score =  139 bits (351), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 86/198 (43%), Gaps = 11/198 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
            +  +       +++E   H+ L R   +   A    G+  +   G++I + + + +R +
Sbjct: 4   NKFYMPTLREDPQDAEIASHKLLLRAGMIRKTAA---GLYSYLPLGYRIVRKVENIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           + +   +EI+ P    + +W++SG W ++   MF +K  ++     R F L P       
Sbjct: 61  MDNYGSQEIHMPITQPREIWEESGRWKTFGPEMFKLKDRNN-----REFCLGPTAEEYFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    +KSY++LP+ + +  + YR+E      G+ R R F   DA+ F   E+   E  
Sbjct: 116 DLVKGEIKSYKQLPLNIYQIQTKYRDEKRPRF-GINRSREFLMQDAYTFDVDEEAMGEAY 174

Query: 406 -KIHNLIISIYKDFGFEK 422
             +      ++   G E 
Sbjct: 175 MNMWRAYEVVFNRLGLEY 192



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 59/164 (35%), Gaps = 9/164 (5%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
             R  + G I Q+        NA +++ + ++    M    + G       I+ +N    
Sbjct: 401 FKRGIEVGNIFQLGQKYSKSMNATFLDENGKEQFFWMGSYGI-GVTRSVSAIVEQNHDDK 459

Query: 546 LPLWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
             +W    +P   I+T +          A+++   L    + +  D R E    K  +  
Sbjct: 460 GMIWPLVVAPYHVIITIVNTKDEEQNTLAEKLYEKLLLQGVEVLLDDRKERAGVKFNDRD 519

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  IP+ I  G K A E  +      +    ++S  +A   + +
Sbjct: 520 LIGIPLRITVGKKAAEE-IVEFSERRTLENVEMSSTEAYDKVME 562


>gi|188997600|ref|YP_001931851.1| prolyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
 gi|226701347|sp|B2V6W5|SYP_SULSY RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|188932667|gb|ACD67297.1| prolyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 564

 Score =  139 bits (351), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 42/217 (19%), Positives = 89/217 (41%), Gaps = 11/217 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  +        ++    H  L R   +  ++    G+  +   G K+ + + + +R+
Sbjct: 3   ASKFFMPTLKENPSDAVVPSHIYLVRGGFIRSLSA---GIYEYLPLGLKVLRKIENIIRK 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
            + D    E+  P +    LW+++G W  Y   +F +K   D       FAL P +    
Sbjct: 60  HMDDSGALEVLLPILTPAELWKETGRWHVYGKELFRLKDRKDA-----EFALGPTHEETI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    ++SY++LP+   +  + +R+E     +GL+R R F   D + F   E+   + 
Sbjct: 115 TDLVRKNVRSYKDLPLNFYQIQTKFRDEARPR-YGLIRGREFIMKDGYSFDVSEEDAKKT 173

Query: 405 LKIH-NLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            ++       I+K+ G + +MV+          S   
Sbjct: 174 YEVMKEAYHKIFKELGLDYLMVEADVGAIGGKFSHEF 210



 Score = 77.9 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 25/150 (16%), Positives = 54/150 (36%), Gaps = 8/150 (5%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW---LSPIQ 554
           +         A++V+   ++   +++     G       I+ +       +W   L+P  
Sbjct: 411 LGTKYSESMKAYFVDKDGKEKS-IIMGCYGIGVSRLISAIVEQYHDDKGIIWPENLAPFN 469

Query: 555 AIVTTITSSAVEYAQ---EIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
             +  +     E      +I   LK   L +  D R+E+   K ++  +  IP  I+ G 
Sbjct: 470 VHILVLNPKDQESLNVGFDIYKKLKEKGLDVLLDERDESAGAKFKDADLIGIPHRIVIG- 528

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           K   E  +  ++   +  + V +   I  L
Sbjct: 529 KALKEGKVEYQKRDGSIKELVDVKLIINKL 558


>gi|311030092|ref|ZP_07708182.1| prolyl-tRNA synthetase [Bacillus sp. m3-13]
          Length = 561

 Score =  139 bits (351), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 43/216 (19%), Positives = 85/216 (39%), Gaps = 11/216 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +   +        ++E + H+ L R   +    ++ SG+  +   G K+ + +   +R +
Sbjct: 4   SNMLIPTLREVPADAEVKSHQLLLRAGYIR---QNTSGIYSFLPLGKKVLKKVEDVVREE 60

Query: 287 I-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P +    LW++SG W SY   +  +       +  R FAL   +     
Sbjct: 61  MENAGAVELLMPAMQAAELWKESGRWYSYGPELMRLND-----RHNREFALGATHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT-KEQMFNEC 404
            +    +KSY++LP+ L +  + +R+E      GL+R R F   DA+ F    E +    
Sbjct: 116 TLVRDEVKSYKKLPLSLYQIQTKFRDEKRPRF-GLLRGREFLMKDAYSFHANAESLDETY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            K+     +I+   G     V   +       +   
Sbjct: 175 EKMFTAYSNIFTRLGLNFRAVIADSGAMGGKDTHEF 210



 Score = 84.4 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 27/152 (17%), Positives = 63/152 (41%), Gaps = 10/152 (6%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPI 553
           +         A +++ +  +  P+++     G   R +  ++E +        P  ++P 
Sbjct: 413 LGTRYSEAMGANFLDENG-RNQPMIMGCYGIGVS-RVLAAIVEQYHDENGIVWPKAVTPF 470

Query: 554 QAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
              V  +     +    A+EI + LK+  L++  D R E    K  +  +  +P+ +  G
Sbjct: 471 DVHVIPVNIKNEAQASLAEEIYSELKNSGLAVLMDDRQERPGVKFADADLIGLPVRVTVG 530

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            K A ER + ++   +   +++S+ + I  L 
Sbjct: 531 KK-AEERIVEVKWRETGDMEELSVEELIQKLR 561


>gi|18311410|ref|NP_563344.1| prolyl-tRNA synthetase [Clostridium perfringens str. 13]
 gi|168206822|ref|ZP_02632827.1| prolyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
 gi|168214717|ref|ZP_02640342.1| prolyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
 gi|168217921|ref|ZP_02643546.1| prolyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
 gi|182626988|ref|ZP_02954718.1| prolyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
 gi|81849146|sp|Q8XHQ4|SYP_CLOPE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|18146094|dbj|BAB82134.1| proline-tRNA ligase [Clostridium perfringens str. 13]
 gi|170661763|gb|EDT14446.1| prolyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
 gi|170713833|gb|EDT26015.1| prolyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
 gi|177907658|gb|EDT70282.1| prolyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
 gi|182380028|gb|EDT77507.1| prolyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
          Length = 570

 Score =  139 bits (351), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 52/240 (21%), Positives = 97/240 (40%), Gaps = 11/240 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +   +        E+E   H+ + R   +  +A    G+  +   G K+ + + + +R +
Sbjct: 4   SNMLVGTLREVPAEAEIESHKLMLRAGLMRKMAA---GIYNYMPLGLKVIENVKNIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           + +   +E     ++   LWQ+SG WD+Y A MF +K      +  R F L P +     
Sbjct: 61  MNNAGAQEFLASALIPAELWQESGRWDAYGAEMFRLKD-----RHNRDFCLGPTHEEVFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +  + +KSY++LP+ L +  + YR+E      G+MR R F   D + F    E +    
Sbjct: 116 DIVRNEIKSYKQLPLNLYQIQTKYRDERRPRF-GVMRSREFIMKDGYSFDKDQEGLDLAY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            K+    ++I+   G +   V   +      GS      +E     V+          I 
Sbjct: 175 EKMRKAYVNIFNRCGLDAKAVAADSGAIGGSGSAEFMVKSEVGEDDVVFCTACDYAANIE 234



 Score = 86.8 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 32/172 (18%), Positives = 60/172 (34%), Gaps = 9/172 (5%)

Query: 480 EYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           E   +  I R  + G I  +         A +++    K  P ++     G       I+
Sbjct: 393 ECGKEITISRGTEVGHIFKLGTKYSESMGATFIDEDG-KAKPFIMGCYGIGVTRTVASII 451

Query: 539 IENFKGNLPLWL---SPIQAIVTTITSSAVEYA---QEIANLLKSHHLSIETDFRNETIN 592
            ++   N  +W    +P    V        E A   +EI N L+   +    D R E   
Sbjct: 452 EQHNDENGIIWPLEVAPYHVSVIPANVKNEEQATKAEEIYNELRKMGVEALLDDRKERAG 511

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            K ++  +  IP+ I  G K   E  +  +       + +S+ +    + +E
Sbjct: 512 VKFKDSELMGIPMRITVG-KMIGEGQVEFKLRNGGEVETLSIEEVYNRVREE 562


>gi|169630222|ref|YP_001703871.1| prolyl-tRNA synthetase [Mycobacterium abscessus ATCC 19977]
 gi|226701313|sp|B1MD96|SYP_MYCA9 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|169242189|emb|CAM63217.1| Prolyl-tRNA synthetase ProS [Mycobacterium abscessus]
          Length = 580

 Score =  139 bits (351), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 58/361 (16%), Positives = 126/361 (34%), Gaps = 28/361 (7%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +  +A    GV  W   G ++ + + + +R ++     +EI  P 
Sbjct: 19  DAEVPSHKLLIRAGYVRPVA---PGVYSWLPLGLRVLRKIENIVREEMNAIGGQEILLPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++ +  W  Y  ++F +K   D         L P +             SY++ 
Sbjct: 76  LLPRAPYETTNRWTEYGDSLFRLKDRRDN-----DMMLGPTHEELFALTVKGEYSSYKDF 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKD 417
           PV L +  + YR+E      G++R R F   D++ F T +         H      I+  
Sbjct: 131 PVILYQVQTKYRDEARPR-AGILRGREFVMKDSYSFDTSDDGLKAAYHAHRDAYQRIFGR 189

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
            G + ++V  ++       S+    ++       +  +++     +   +     A   P
Sbjct: 190 LGLDYVIVAATSGAMGGSASEEFLAESPTGEDTFVRCVESGYAANVEAVITPAPPA--RP 247

Query: 478 KFEYILKDAIGRDWQCGTIQ--VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
             E + +  +       TI   VD+   +        + + K   + + +   G     +
Sbjct: 248 -IEGLAEAVVHETGDTPTIATLVDWANSAGLGRTVTAADTLKNILLKVRQP--GGDWELL 304

Query: 536 GIMI----ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIA-----NLLKSHHLSIETDF 586
            + +    E     L   L P +  +        +Y   +        L ++ +    D 
Sbjct: 305 AVGVPGDREVDDKRLGAALEPAEYELLGDAD-FAKYPFLVRGYIGPKALLANGVRYLVDP 363

Query: 587 R 587
           R
Sbjct: 364 R 364



 Score = 92.9 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 72/170 (42%), Gaps = 11/170 (6%)

Query: 484 KDAIGRDWQCGTIQVDFNLP---SRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMI 539
            D  G+      I++           +AF V+   E   PV + +  +G  + R + ++ 
Sbjct: 409 PDGAGQLVSARGIEIGHIFQLGRKYTDAFTVDVLGENGKPVRLTQGSYGIGVSRLVAVVA 468

Query: 540 EN----FKGNLPLWLSP--IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           E          P  +SP  +  ++     +A   A+E+A  L      +  D R  +   
Sbjct: 469 EQQHDELGLRWPSAVSPFDVHVVIANKDDAARAGAEELAAELDRLGHEVLLDDRTASPGV 528

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           K ++  +  +P I++ G +  ++ +I +R   +  TQ +++ DA+  +T+
Sbjct: 529 KFKDAELLGVPWIVVIG-RGWADGTIELRNRFTGETQPIAVTDAVASVTQ 577


>gi|167842004|ref|ZP_02468688.1| prolyl-tRNA synthetase [Burkholderia thailandensis MSMB43]
          Length = 578

 Score =  139 bits (351), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 45/207 (21%), Positives = 84/207 (40%), Gaps = 11/207 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ + R   +  +A    G+  +   G +  + + + +R ++      E+  P 
Sbjct: 17  DAEIVSHKLMVRAGMIRRVA---GGIYNYLPVGLRSIRKVEAIVREEMNRAGAIELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    LWQ+SG W+ Y   +   K      +    F + P +      +  + +KSYR++
Sbjct: 74  VQPAELWQESGRWEQYGPELLRFKD-----RKQNEFVIGPTHEEVVTDIARNQIKSYRQM 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKD 417
           PV   +  + +R+E      G+MR R F   DA+ F    +   E   K+++  + I+  
Sbjct: 129 PVNFYQIQTKFRDEIRPRF-GVMRGREFIMKDAYSFDKDHESLKESYKKMYDAYVRIFSR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDA 444
            G E   V          GS      A
Sbjct: 188 IGLEFRPVAADNGSIGGSGSHEFHVIA 214



 Score = 77.5 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 24/164 (14%), Positives = 59/164 (35%), Gaps = 11/164 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE----NFK 543
           R  + G + Q+         A +++    K  P+++     G I R +G  IE    +  
Sbjct: 409 RGIEVGHVFQLGTKYSDAMGATFIDESG-KTQPMVMGCYGIG-ITRILGAAIEQNFDDKG 466

Query: 544 GNLPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
              P  ++P + ++  +    + +  E A  +   L +  + +  D R E       +  
Sbjct: 467 IVWPEAIAPFEVVLCPMGYDRSDAVREAADTLYADLVAAGVDVILDDRGERPGVMFADWE 526

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  +P  ++ G++   +  I  +         +    A   + +
Sbjct: 527 LIGVPHRLVIGERGLKDGKIEYQGRRDAEATLLPADSAATAVAE 570


>gi|148269548|ref|YP_001244008.1| prolyl-tRNA synthetase [Thermotoga petrophila RKU-1]
 gi|166980169|sp|A5IJQ9|SYP_THEP1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|147735092|gb|ABQ46432.1| prolyl-tRNA synthetase [Thermotoga petrophila RKU-1]
          Length = 577

 Score =  139 bits (351), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 54/235 (22%), Positives = 92/235 (39%), Gaps = 11/235 (4%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
            + E   H  L R   +  +A    G+  +   G ++   + + +R ++     +EI  P
Sbjct: 16  SDVETVSHEYLLRGGFIRKVAA---GIYTYLPLGRRVLLKIENIVREEMNRIGAQEILMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW+QSG WD Y   M  +K      +  R F L P +      +  + L+SY++
Sbjct: 73  ILQPAELWKQSGRWDDYGPEMMKLKD-----RHERDFTLGPTHEEIVTDLVKNELRSYKQ 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYK 416
           LP+ L +  + YR+E      GL+R R F   DA+ F  + E +     +       I +
Sbjct: 128 LPLTLYQIANKYRDEIRPRF-GLLRAREFIMKDAYSFHASWESLDETYEEFKKAYSRIME 186

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
             G   ++++  T       S      A+     VL   K   Q         GE
Sbjct: 187 RLGVRYMIIEAETGAIGGNASHEFVVPAKIGETNVLFCEKCGYQASDEKAEYRGE 241



 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 28/169 (16%), Positives = 67/169 (39%), Gaps = 17/169 (10%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF----KGNLPLWLSPI 553
           +         A++++ + E   P ++    +G   R +  ++E+F        PL ++P 
Sbjct: 412 LGTKYSEAMKAYFMDENGEMK-PFIMGCYGWGVS-RTMAAVVEHFHDENGMIWPLSIAPY 469

Query: 554 QAIV---TTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
             +V       +   +  ++I  +L      +  D R  +  +K ++  +   PI I  G
Sbjct: 470 TVVVDILNMNDAEQKQVGEKIYQVLSEKGEEVVLDDREVSPGFKFKDADLIGFPIRINVG 529

Query: 611 DKEASERSIGIRRFGSTTTQKV-------SLLDAIPILTKESLPPDCQK 652
            +   E  + +++  S    KV       +LL+ +  + +E  P +  +
Sbjct: 530 -RSLKEGVVELKKRYSKELVKVNIKNGFGTLLETLEKMKREYDPKEAAR 577


>gi|299534746|ref|ZP_07048076.1| prolyl-tRNA synthetase 1 [Lysinibacillus fusiformis ZC1]
 gi|298729834|gb|EFI70379.1| prolyl-tRNA synthetase 1 [Lysinibacillus fusiformis ZC1]
          Length = 568

 Score =  139 bits (351), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 47/221 (21%), Positives = 92/221 (41%), Gaps = 11/221 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++E + H++L R      I ++ SGV  +     ++   + + +R +
Sbjct: 4   SKTFIPTLREVPADAEVKSHKQLLRAG---FIRQNTSGVYSYLPLAKRVLTKIETIIREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++  +  E+  P +    LWQ+SG W+ Y   +  +K   D     R FAL P +     
Sbjct: 61  MEAINSIELLMPSLQSAELWQESGRWEKYGPELMRLKDRHD-----RDFALGPTHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +    +KSY++LP+ L +  + +R+E      GL+R R F   DA+ F    E +    
Sbjct: 116 TLVRDEIKSYKKLPLTLYQIQTKFRDEKRPRF-GLLRGREFIMKDAYSFHASRESLDETY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
             ++    +I+   G     V          G+      +E
Sbjct: 175 EDMYRAYSNIFSRLGLNYRAVIADAGSIGGKGTHEFMVLSE 215



 Score = 76.0 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 63/153 (41%), Gaps = 10/153 (6%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPI 553
           +     ++ N  +++    K  P ++     G   R +  + E+F+ +     P  L+P 
Sbjct: 414 LGTTYSAKMNGTFLDEQG-KAQPFIMGCYGIGVS-RILAAVAEHFQDDNGFTWPTQLAPY 471

Query: 554 QAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
              V  +     + V  A+E+  LLKS+   +  D R E    K  +  +  +P+ +  G
Sbjct: 472 DIHVVPVNTKDEAQVALAEELYGLLKSYRYDVLLDDRPERAGVKFADADLIGLPVRVTVG 531

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            K A+E  + ++   +  T +    + I  L +
Sbjct: 532 KK-ATEGIVEVKFRQTGETFEWKKEEVIDRLNE 563


>gi|119953193|ref|YP_945402.1| prolyl-tRNA synthetase [Borrelia turicatae 91E135]
 gi|119861964|gb|AAX17732.1| prolyl-tRNA synthetase [Borrelia turicatae 91E135]
          Length = 501

 Score =  139 bits (351), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 78/425 (18%), Positives = 151/425 (35%), Gaps = 65/425 (15%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           EE   + +  + ++  L   +     ++     G+ I++ + S +  K K+  +E    P
Sbjct: 22  EEEFSKWYLDIVQKAKLVDYSPIKGCMVI-MPYGYAIWEQIKSILDNKFKETGHENAYFP 80

Query: 298 QVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
            ++     + +  H   +   +  +  A           L+P +      +++  +KSYR
Sbjct: 81  LLIPYEFLEREKEHVKGFSPELAVITTAGGEEL-AEPLVLRPTSETIIWNMYSKWIKSYR 139

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIY 415
           +LPV++ ++ ++ R E        +R   F   + H    T  +   E L I NL     
Sbjct: 140 DLPVKINQWANIVRWEKR--TRPFLRTTEFLWQEGHTAHETAGEALEETLFILNLYKRFI 197

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           +D+    +     T  EK  G                                    A  
Sbjct: 198 EDYLAIPVFCGQKTEREKFAG------------------------------------AVS 221

Query: 476 GPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
               E +++D   +  Q GT      N    F+  + N   E  +   +    +G   R 
Sbjct: 222 TYTIEALMQD--KKALQAGTSHYLGLNFAKAFDVKFQNKKGEMDY---VFATSWGVSTRL 276

Query: 535 IGIMI----ENFKGNLPLWLSPIQAIVTTI-------TSSAVEYAQEIANLLKSHHLSIE 583
           IG +I    ++    LP  ++PI+ I+  I           +EYA  I N+LK     +E
Sbjct: 277 IGALIMVHSDSKGLILPPKIAPIEIIIVPIFKRDDEVNKKIIEYATTIFNILKEAKFRVE 336

Query: 584 TDFRN--ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRF--GSTTTQKVSLLDAIP 639
            D R+   +  ++     +K IPI I  G  +     + + R      +  +VS+ +   
Sbjct: 337 LD-RDIKNSPGFRFAAVELKGIPIRIEVGSNDILMDCVTVARRDQDKNSKYQVSVKELPS 395

Query: 640 ILTKE 644
            +  E
Sbjct: 396 KMRHE 400


>gi|53715632|ref|YP_101624.1| uridine kinase [Bacteroides fragilis YCH46]
 gi|253566555|ref|ZP_04844008.1| uridine kinase [Bacteroides sp. 3_2_5]
 gi|265767423|ref|ZP_06095089.1| uridine kinase [Bacteroides sp. 2_1_16]
 gi|52218497|dbj|BAD51090.1| uridine kinase [Bacteroides fragilis YCH46]
 gi|251944727|gb|EES85202.1| uridine kinase [Bacteroides sp. 3_2_5]
 gi|263252728|gb|EEZ24240.1| uridine kinase [Bacteroides sp. 2_1_16]
 gi|301165088|emb|CBW24656.1| putative phosphoribulose/uridine kinase [Bacteroides fragilis 638R]
          Length = 557

 Score =  139 bits (351), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 45/241 (18%), Positives = 98/241 (40%), Gaps = 3/241 (1%)

Query: 1   MPSDIKLTFPDGSI-KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-S 58
           M   +++   + +I K FP+ ++  D+    + +   + V+  +N +   L+  V     
Sbjct: 1   MKQMLQIYCKNNNISKEFPIGSSLLDIYYGFNLNFPYQVVSAKVNNRSEGLNFRVYNNKD 60

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           +E +   D   +     S   ++ +AV  ++P  ++ +   +  G++ +    +P + ++
Sbjct: 61  VEFLDVRDSSGMRTYVRSLCFVLYKAVSELFPNGKLFVEHPVSKGYFCNLRIGRPVTLED 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           ++QI+K+MQEIIA D  + +      +A  +F  +    KV++LES         Y  G 
Sbjct: 121 VSQIKKRMQEIIAEDITYHRIECHTTEAVRVFSERGMNDKVKLLES-SGSIYTYYYTLGG 179

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             D   G  + STG +  F  +    G   R  +                 ++ +     
Sbjct: 180 TADYYYGNLLPSTGFIHLFDLVKYYDGLLLRIPNKENPSVLEDVVKQEKMLDVFKEHLRW 239

Query: 239 E 239
            
Sbjct: 240 N 240


>gi|296132879|ref|YP_003640126.1| prolyl-tRNA synthetase [Thermincola sp. JR]
 gi|296031457|gb|ADG82225.1| prolyl-tRNA synthetase [Thermincola potens JR]
          Length = 579

 Score =  139 bits (351), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 47/245 (19%), Positives = 96/245 (39%), Gaps = 11/245 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++           E+E   H  + R      I +  SG+  +     ++ + +   +R 
Sbjct: 3   ASEILAPTLREVPAEAEVISHILMLRAG---FIRKSASGIYTYLPLANRVIKKVSQIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +E+  P +    LWQ+SG WD Y   +F +K      +  R+FAL P +    
Sbjct: 60  EMDRKGGQELILPIMQPAELWQESGRWDVYGDELFRLKD-----RHGRSFALGPTHEEII 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + ++SY+++P+ L +  + YR+E      GLMR R F   D + F   E   +E 
Sbjct: 115 TDLVRNEIRSYKQMPMLLYQIQNKYRDERRPRF-GLMRGREFIMKDLYSFDRDEAGLDES 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             K+ +    ++   G +   V+  +       +      AE+    ++   +      +
Sbjct: 174 YNKMFDAYTRVFSRCGLKFRPVEADSGAIGGSSTHEFMVLAESGEAAIVYCTECEYAANV 233

Query: 464 NTGVL 468
                
Sbjct: 234 EKAEA 238



 Score =  102 bits (253), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 30/165 (18%), Positives = 68/165 (41%), Gaps = 8/165 (4%)

Query: 486 AIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           A+ R  + G I  +         A +++ + ++ + +++     G        + +N   
Sbjct: 400 AMARGIEVGQIFKLGTKYSKALGAKFLDENGKEQY-IVMGCYGIGITRTVAAAIEQNHDQ 458

Query: 545 NLPLWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           +  +W    +P Q IV  ++   S  VE A+ I + L    + +  D RNE    K ++ 
Sbjct: 459 DGIIWPMSIAPFQVIVVPVSAKSSEQVELAERIYSQLLEAGIEVIIDDRNERPGVKFKDA 518

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +   PI +  G+K   E  + +R   +  T+ + + + +  +  
Sbjct: 519 DLIGYPIRVTVGNKAVDEGRVEVRLRKTGDTRDLPVEEVVTYVKN 563


>gi|254468329|ref|ZP_05081735.1| prolyl-tRNA synthetase [beta proteobacterium KB13]
 gi|207087139|gb|EDZ64422.1| prolyl-tRNA synthetase [beta proteobacterium KB13]
          Length = 561

 Score =  139 bits (351), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 43/219 (19%), Positives = 89/219 (40%), Gaps = 14/219 (6%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++      +++E + H+ + R   +  ++   SG+  W   G ++ + + S +R 
Sbjct: 3   TSQFFISTLKEAPQDAELKSHQLMVRAGYVKRLS---SGLYTWMPIGLRVLRKIESIIRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P +    LWQ++G W  +   M  +       +    F   P +    
Sbjct: 60  EMNASGAVELLMPAIQPAELWQETGRWQQFGPQMLKIND-----RHQNEFCFGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    L SY++LP+   +  + +R+E      G+MR R F   DA+ F   E      
Sbjct: 115 TDIARKELNSYKQLPINFYQIQTKFRDEIRPRF-GVMRAREFLMKDAYSFHANENCLQ-- 171

Query: 405 LKIHNLIISIY-KDFGFEKIMVKLSTRPEKRVGSDALWD 442
            K++ L+   Y + F    +  +        +G DA  +
Sbjct: 172 -KMYELMFETYNRIFSRIGLQFRSVAADSGAIGGDASHE 209



 Score = 67.5 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 29/173 (16%), Positives = 57/173 (32%), Gaps = 16/173 (9%)

Query: 484 KDAIGRDWQCGTI------QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
            D  G+   C  I      Q+         A  +N   +     M    +   + R +  
Sbjct: 388 PDESGKLKFCRGIEVGHIFQLGKKYSESMQASILNEEGKSQTMTMGCYGI--GVSRIVAA 445

Query: 538 MIENF----KGNLPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNE 589
            IE         LP  ++P + I+  I           A +I   L    + +  D R  
Sbjct: 446 AIEQNNDENGMILPKSIAPFELIIVPIGYHKNDKVRAQANKIYADLLKSGIDVILDDRVA 505

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
                  E  +  IP  ++ G+K  +E  +  +    + ++ +++ D I  + 
Sbjct: 506 RPGIMFAESDLIGIPNRLVIGEKSLNENKVEFKSRSESNSEMINISDLIHFIK 558


>gi|253576294|ref|ZP_04853624.1| prolyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14]
 gi|251844187|gb|EES72205.1| prolyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14]
          Length = 571

 Score =  139 bits (351), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 45/221 (20%), Positives = 88/221 (39%), Gaps = 12/221 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++           ++E   H+ L R   +  +A    G+  +   G K+   +   +R +
Sbjct: 4   SRLLSPTLREAPSDAEAASHQHLLRAGYIRQLAA---GIYSYLPLGRKVLLRIEQIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E+  P +    LWQ+SG ++ Y   +   K   D     R FAL P +     
Sbjct: 61  MNRAGAQELLLPAMQPAELWQRSGRYERYGPELIRFKDRHD-----REFALGPTHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           ++    + SYR+LP+ + +  + +R+E      GL+R R F   DA+ F T     +   
Sbjct: 116 SLLRDEVNSYRQLPLTVYQIQTKFRDERRPRF-GLLRGREFLMKDAYSFDTDWTGLDRAY 174

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPE-KRVGSDALWDDA 444
           + + +    I++  G +   V+          G+      A
Sbjct: 175 QSMVSAYEKIFRRCGLKFRAVEADPGTIGGEGGTHEFMALA 215



 Score = 91.8 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 61/160 (38%), Gaps = 9/160 (5%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G +  +      +  A ++++   +  P+++     G       I  ++   +  
Sbjct: 408 RGIEVGHVFKLGTRYSEQLGAVFLDAQGHQQ-PMIMGCYGIGLSRLMSAIAEQHHDEHGL 466

Query: 548 LWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W    +P Q  +  I+      +E A ++   L    + +  D R+E    K  +  + 
Sbjct: 467 IWPVSIAPYQVHIIPISVTNPLQMELALQLYEKLTQAGIDVLLDDRDERPGSKFHDADLI 526

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            IP  +I G K A +  +          + +SL +AI  +
Sbjct: 527 GIPYRVIIG-KSAEQGQVEWVERNIMKRELISLEEAIQRI 565


>gi|330997135|ref|ZP_08320988.1| phosphoribulokinase/uridine kinase family protein [Paraprevotella
           xylaniphila YIT 11841]
 gi|329570930|gb|EGG52637.1| phosphoribulokinase/uridine kinase family protein [Paraprevotella
           xylaniphila YIT 11841]
          Length = 553

 Score =  139 bits (351), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 52/242 (21%), Positives = 97/242 (40%), Gaps = 3/242 (1%)

Query: 1   MPSDIKLTFPDGSI-KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGS 58
           M  +IK+   +       P+ +T  D   +++  +    V+  +N KV  L      +  
Sbjct: 1   MVQEIKIRCKNNKKTLQLPIGSTLWDAYHALNLQMPYGPVSAKVNNKVEGLHYRFYNDKD 60

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           +E +       +     S   ++ +AV+ ++P   + I   +  G+Y D    +P   D+
Sbjct: 61  VEFLDVTSSSGMRTYTRSLFFVLVKAVKDLFPGCVLRIETPVSRGYYCDLRIGRPIEEDD 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           +  I ++M+EI+  D PF +     E A E+F  +    KV +LES  A      Y+  +
Sbjct: 121 VTAIWRRMREIVDADIPFHRIQSPTEDAIEMFRRQGMTSKVRLLESYGAIYTH-YYQLDQ 179

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             D   G  + STG +K F  +    G   R  S +               E+ +  +  
Sbjct: 180 TVDYFYGSLLTSTGGLKVFDVMKYYDGLLLRIPSRKNPEELEEMVHQEKMLEIFREHHRW 239

Query: 239 EE 240
           +E
Sbjct: 240 QE 241


>gi|148652560|ref|YP_001279653.1| prolyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
 gi|172048509|sp|A5WDG2|SYP_PSYWF RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|148571644|gb|ABQ93703.1| prolyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
          Length = 576

 Score =  139 bits (351), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 52/284 (18%), Positives = 103/284 (36%), Gaps = 17/284 (5%)

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLFH--IAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
              +Q+L+   +    D   ++ ++ L    I +  SG+  W   G K+ Q +   +R +
Sbjct: 1   MRASQFLFATLKETPSDADIVSSQLMLRAGLIRKLASGLYVWLPMGLKVLQKVEKIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +++   +E+  P      LWQ+SG ++ Y   +        T +  R F L P +     
Sbjct: 61  MQNIGGQEVLMPMTQPAELWQESGRFEDYGPELLRF-----TDRHNRDFVLGPTHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    L+SY++LPV   +    +R+E      G+MR R FT  DA+ F   +       
Sbjct: 116 DLARGELRSYKQLPVTFFQIQGKFRDEIRPRF-GIMRAREFTMKDAYSFHVDQASLEVTY 174

Query: 406 -KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            ++++    I++  G     V   T       S      A +    +  +  +     + 
Sbjct: 175 QQMYDAYTRIFQRLGLNFRAVLADTGSIGGSASHEFHVLAGSGEDAIAFSDGSDYAANVE 234

Query: 465 TGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
               +          E        ++     IQ +  L    + 
Sbjct: 235 LAEAICTD-------ERAAPTQDKQNVSTPKIQTNEELAKFLDI 271



 Score = 82.5 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 33/172 (19%), Positives = 64/172 (37%), Gaps = 18/172 (10%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NF 542
           +I R  + G I Q+        N   +    +   PV +    +G  + R I   IE N 
Sbjct: 407 SIKRGIEVGHIFQLGDKYSKALNCTVMGEDGK---PVTLMMGCYGIGVSRIIAAAIEQNH 463

Query: 543 KGNLPLW---------LSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNET 590
             N  +W         ++P    +  +     + ++ A+ +   LK+  L++  D RNE 
Sbjct: 464 DDNGIIWAKTPDIKDSIAPFDIAIVPMKSKEDTVMQTAEALYEELKARGLNVILDDRNER 523

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
              K  +  +  IP  I+  D+  +E             Q +S  + +  ++
Sbjct: 524 PGVKFADLELIGIPHRIVVSDRNLAEDKYEYVDRRDGEKQLLSREELLAKVS 575


>gi|78042796|ref|YP_360595.1| prolyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901]
 gi|114152179|sp|Q3AB89|SYP_CARHZ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|77994911|gb|ABB13810.1| prolyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901]
          Length = 569

 Score =  139 bits (351), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 46/220 (20%), Positives = 87/220 (39%), Gaps = 11/220 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  +        E+E   H+ L R      I +  SGV  +     ++ + ++  +R +
Sbjct: 4   SQYFMPTLRENPAEAEVISHKLLLRAG---FIRKSASGVYTYLPLAQRVLKKIMQIIREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E+  P +    LW ++G W  Y   +F +K      +  R F L P +     
Sbjct: 61  MDRQGGQELMLPILQPAELWLETGRWHVYGPELFKLKD-----RHNRDFCLGPTHEEIIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    ++SY+ELP+ L +  + YR+E      GLMR R F   D + F   E+      
Sbjct: 116 DLVRREVRSYKELPLLLYQIQNKYRDEKRPRF-GLMRGREFIMKDLYSFDRDEEGLEISY 174

Query: 406 -KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
            K++    +++   G +   V+          +      A
Sbjct: 175 RKMYEAYTNVFTRCGLKFRAVEADAGAIGGSTTHEFMVLA 214



 Score = 93.3 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 64/161 (39%), Gaps = 6/161 (3%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPL 548
           R  + G I    +  SR    +    + +  P+++     G        + +N   +  +
Sbjct: 404 RGIEVGQIFKLKDKYSRKMGAFYLDENGQQKPIIMGCYGIGVTRTMAAAVEQNHDEDGII 463

Query: 549 WLS---PIQAIVTTITSS---AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
           W +   P + IV  +++     ++ A+E+ NLL +    +  D R+E    K ++  +  
Sbjct: 464 WPAAIAPFEVIVVPVSNKDEQQMKMAEEVYNLLLNAGFEVVIDDRDERPGVKFKDADLIG 523

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           IP+ I  G +  SE    ++   +   +     + +  L +
Sbjct: 524 IPLRITVGKRTVSEGVYEVKIRRTREEKVFQKEELVDGLRQ 564


>gi|297545340|ref|YP_003677642.1| prolyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|296843115|gb|ADH61631.1| prolyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 570

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 46/216 (21%), Positives = 92/216 (42%), Gaps = 11/216 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  +        E+E   H  + +   +  +A   SGV  +   G ++ + +   +R +
Sbjct: 4   SQLLVPTLREIPAEAEIPSHILMLKAALMRKLA---SGVYIYLPLGQRVLRKVEQIIREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E+    ++   L ++SG WD +   MF +K  ++     R F L P +     
Sbjct: 61  MDRAGSQEVLMSALIPAELLKESGRWDVFGPEMFKLKDRNE-----RDFCLGPTHEEVFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +  + +KSYR+LP+ L +  + +R+E      G+MR R F   DA+ F    E +    
Sbjct: 116 DLIRNEVKSYRQLPLILYQIQTKFRDERRPRF-GVMRSREFIMKDAYSFDVDWEGLDKSF 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            K++     I+   G + ++V+  +       S   
Sbjct: 175 EKMYEAYCRIFDRCGLKYLVVEADSGAMGGKDSKEF 210



 Score = 89.5 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 32/170 (18%), Positives = 64/170 (37%), Gaps = 12/170 (7%)

Query: 487 IGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           I R  + G I  +         A YV+    +  P+++     G       I+ +N    
Sbjct: 403 IDRGIEVGHIFKLGTKYSDALGAKYVDEEGNEK-PIVMGCYGIGINRTVAAIIEQNHDDK 461

Query: 546 LPLWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
             +W    +P   I+  +     +    A++I   L+   + +  D R+     K  +  
Sbjct: 462 GIIWPMSVAPYHVIIVPVNVSNEAQNGVAEDIYAALQKEGIEVLIDDRDLRAGVKFNDAD 521

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT---KESL 646
           +  IPI I  G K  S+  + I+   +   ++V + D +  +    KE +
Sbjct: 522 LLGIPIRITVGKK-VSDGIVEIKLRENEEAEEVKISDVVEKVKNIIKEKM 570


>gi|262043501|ref|ZP_06016622.1| tetraacyldisaccharide 4'-kinase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259039164|gb|EEW40314.1| tetraacyldisaccharide 4'-kinase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 123

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 44/119 (36%), Positives = 67/119 (56%)

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           ERF GI++E++ G LP WLSP+QA+V TIT     YA+++   L+   L  E D RNE I
Sbjct: 2   ERFTGILLEHYVGKLPAWLSPVQAVVMTITDKQHHYAEQVLKALRKKGLRCEADLRNEKI 61

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDC 650
            +KIRE ++ +IP ++I GD E +   + +R         + L +A   +     PP+ 
Sbjct: 62  GFKIREQTLARIPFLLIVGDAEENAARVTVRDRTGRCMGTLLLNEAADAIKICCQPPEV 120


>gi|68536224|ref|YP_250929.1| prolyl-tRNA synthetase [Corynebacterium jeikeium K411]
 gi|260578924|ref|ZP_05846827.1| proline--tRNA ligase [Corynebacterium jeikeium ATCC 43734]
 gi|114152185|sp|Q4JV46|SYP_CORJK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|68263823|emb|CAI37311.1| proS [Corynebacterium jeikeium K411]
 gi|258602898|gb|EEW16172.1| proline--tRNA ligase [Corynebacterium jeikeium ATCC 43734]
          Length = 596

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 66/399 (16%), Positives = 134/399 (33%), Gaps = 65/399 (16%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +  +A    GV  W   G ++ + + + +R ++     +EI+ P 
Sbjct: 19  DAEVPSHKLLVRAGYIRRVA---PGVYSWLPLGLRVLRNIEAVVREEMNAIGAQEISFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  +  +G W  Y   +F +K   +       + L P +     +V      SY++ 
Sbjct: 76  LLPREPYDTTGRWVEYGDALFRLKDRKNA-----DYLLGPTHEEMFTSVVKSEYNSYKDF 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKD 417
           PV L +  + YR+E      G++R R F   D++ F   ++   E  ++H     +I+  
Sbjct: 131 PVILYQVQTKYRDEERPR-AGILRGREFIMKDSYSFNMDDEGLEESYQLHRKAYQNIFDR 189

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
            G +  +   ++       S+     A N      DT   S++            + Y  
Sbjct: 190 LGIKYAICSATSGAMGGSASEEFLAVAANGE----DTFVRSTE------------SDYAA 233

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG-------- 529
             E ++        Q    Q     P      Y    SE    ++      G        
Sbjct: 234 NVEAVVT-------QVPPAQPIEGQPE--AKEYETPDSETIEALVEWANSEGITIDGRAV 284

Query: 530 -SIERFIGIMIENFKGNLPLWLSPI----QAIVTTITSSAVEYAQEIANLLKSHHLSIET 584
            + +    I+I+     L     P       ++                 L++     + 
Sbjct: 285 EAADTLKCIVIKVNDPTLDEEGKPRGESLAGVLVPGNREVD------MKRLEASMEPAQV 338

Query: 585 DFRNETINYKIREHSIKKIPIII--ICGDKEASERSIGI 621
           +  +E           KK P ++    G K  +   + +
Sbjct: 339 ELADE--------ADFKKNPFLVKGYVGPKGLAANGVRV 369



 Score = 80.6 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 38/194 (19%), Positives = 83/194 (42%), Gaps = 20/194 (10%)

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIH 524
            VL G+     P  +     A+ R  + G I Q+       F+   ++   ++  P M  
Sbjct: 411 EVLEGD-----PSPDGKGTLALARGIEIGHIFQLGRKYTEAFDVKILDESGKRSVPTMGS 465

Query: 525 RAVFGSIERFIGI----MIENFKGNLPLWLSP--IQAIVTTITSSAVEYAQEIANLLKSH 578
             V   + R +G+    M+++     P  ++P  +  ++    ++A E A E+   L + 
Sbjct: 466 YGV--GVSRLVGVIAEQMLDDSGLRWPASVAPFDVHVVIANKDAAAGEAAVELVETLSND 523

Query: 579 HLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
            L +  D R + +   K ++  +  +P++++ G +  ++  + +R   +  T +V   DA
Sbjct: 524 GLEVLFDDRPKVSPGVKFKDSELLGMPLVVVVG-RGFADGKVELRNRLTGETYEVDYTDA 582

Query: 638 IP----ILTKESLP 647
           +P     L  E+ P
Sbjct: 583 LPEAKRALRGEARP 596


>gi|281421522|ref|ZP_06252521.1| phosphoribulokinase family protein [Prevotella copri DSM 18205]
 gi|281404594|gb|EFB35274.1| phosphoribulokinase family protein [Prevotella copri DSM 18205]
          Length = 553

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 50/242 (20%), Positives = 97/242 (40%), Gaps = 3/242 (1%)

Query: 1   MPSDIKLTFPDGSIKN-FPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-S 58
           M   I++   +        + +T  D+  +    +    V+  +N KV  +   V     
Sbjct: 1   MKQVIQIRCKNNKKSQKVEIGSTLFDIFSAFDLKMTHGPVSARVNNKVEGMHYRVYNSKD 60

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           +E +             +   ++ +AVQ I+P   V I   + +GFY D    +P   ++
Sbjct: 61  VEFLDMTSSSGSRTYTRTLFFVLCKAVQDIYPATDVVIDIPVSNGFYVDIRLGRPVVDED 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           +  I ++MQEII    P  +  +  E+A  LF+ K +  KV++L++       T Y+ G+
Sbjct: 121 VNIIRRRMQEIIDARMPIRRFTVPTEEAVALFQEKGDVEKVKLLKT-SGAIYTTYYKIGD 179

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D   G  + +T Q+  F       G   R  S +        T  +   E+ +  +  
Sbjct: 180 YVDYYYGTLLTNTSQLYLFGLEKYYDGMLLRIPSLKNPDVLGEMTRQDKMFEIFKEHHRW 239

Query: 239 EE 240
           + 
Sbjct: 240 QS 241


>gi|314923910|gb|EFS87741.1| prolyl-tRNA synthetase [Propionibacterium acnes HL001PA1]
 gi|314966030|gb|EFT10129.1| prolyl-tRNA synthetase [Propionibacterium acnes HL082PA2]
 gi|314981915|gb|EFT26008.1| prolyl-tRNA synthetase [Propionibacterium acnes HL110PA3]
 gi|315090730|gb|EFT62706.1| prolyl-tRNA synthetase [Propionibacterium acnes HL110PA4]
 gi|315094978|gb|EFT66954.1| prolyl-tRNA synthetase [Propionibacterium acnes HL060PA1]
 gi|315104203|gb|EFT76179.1| prolyl-tRNA synthetase [Propionibacterium acnes HL050PA2]
 gi|327328087|gb|EGE69856.1| proline--tRNA ligase [Propionibacterium acnes HL103PA1]
          Length = 581

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 48/220 (21%), Positives = 93/220 (42%), Gaps = 11/220 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  +        ++E   HR L R   +  +A    GV  W   G ++ + + +  R +
Sbjct: 2   SQLFVRTLREDPADAEVPSHRWLVRAGYIRRVA---PGVYSWLPLGLRVMRRIEAICREE 58

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           + +   +E++ P +L    ++++G W  Y  N+F +K      +      L P +     
Sbjct: 59  MANIGAQEVSFPALLASDPYKETGRWVEYGDNLFRLKD-----RKGVDMLLGPTHEEMFT 113

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +      SY++LP+ L +  + YR+E      G++R R F   DA+ F   ++  +E  
Sbjct: 114 LMVKDLYSSYKDLPLCLYQIQNKYRDEARPR-AGILRGREFVMMDAYSFDVAQEGLDEAY 172

Query: 406 KIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
           +      I I+   GF+  +VK  + P     S+     A
Sbjct: 173 QAQRDAYIRIFNRLGFDYAIVKAMSGPMGGSRSEEFLAVA 212



 Score = 74.4 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 59/162 (36%), Gaps = 8/162 (4%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I Q+            ++ + +    V +     G       I          
Sbjct: 419 RGIEIGHIFQLGKKYADALGLKVLDHNGKLVT-VTMGSYGLGVSRAVAAIAEGTCDEKGL 477

Query: 548 LWL---SP--IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            W    +P  +Q + T   +  ++ A  IA+ L    L +  D R  +   K  +  I  
Sbjct: 478 CWPREVAPYDVQVLATGKGTEILDEATRIASELAEAGLEVLLDDRKASPGVKFADSEILG 537

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P  ++ G +   +  + +R   +   ++VS+ +A+  + KE
Sbjct: 538 MPTSVVVG-RGLKDGLVEVRDRSTGENRQVSVAEAVCAVLKE 578


>gi|289579170|ref|YP_003477797.1| prolyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
 gi|289528883|gb|ADD03235.1| prolyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
          Length = 570

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 46/216 (21%), Positives = 92/216 (42%), Gaps = 11/216 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  +        E+E   H  + +   +  +A   SGV  +   G ++ + +   +R +
Sbjct: 4   SQLLVPTLREIPAEAEIPSHILMLKAALMRKLA---SGVYIYLPLGQRVLRKVEQIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E+    ++   L ++SG WD +   MF +K  ++     R F L P +     
Sbjct: 61  MDRAGSQEVLMSALIPAELLKESGRWDVFGPEMFKLKDRNE-----RDFCLGPTHEEVFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +  + +KSYR+LP+ L +  + +R+E      G+MR R F   DA+ F    E +    
Sbjct: 116 DLIRNEVKSYRQLPLILYQIQTKFRDERRPRF-GVMRSREFIMKDAYSFDVDWEGLDKSF 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            K++     I+   G + ++V+  +       S   
Sbjct: 175 EKMYEAYCRIFDRCGLKYLVVEADSGAMGGKDSKEF 210



 Score = 89.1 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 63/170 (37%), Gaps = 12/170 (7%)

Query: 487 IGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           I R  + G I  +         A YV+    +  P+++     G       I+ +N    
Sbjct: 403 IDRGIEVGHIFKLGTKYSDALGAKYVDEEGNEK-PIVMGCYGIGINRTVAAIIEQNHDDK 461

Query: 546 LPLWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
             +W    +P   I+  +     +    A++I   L+   + +  D R+     K  +  
Sbjct: 462 GIIWPMSVAPYHVIIVPVNVSNEAQNGVAEDIYAALQKEGIEVLIDDRDLRAGVKFNDAD 521

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT---KESL 646
           +  IPI I  G K   +  + I+   +   ++V + D +  +    KE +
Sbjct: 522 LLGIPIRITVGKK-VGDGIVEIKLRENEEAEEVKISDVVEKVKNIIKEKM 570


>gi|282854645|ref|ZP_06263980.1| proline--tRNA ligase [Propionibacterium acnes J139]
 gi|282582227|gb|EFB87609.1| proline--tRNA ligase [Propionibacterium acnes J139]
          Length = 585

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 48/220 (21%), Positives = 93/220 (42%), Gaps = 11/220 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  +        ++E   HR L R   +  +A    GV  W   G ++ + + +  R +
Sbjct: 6   SQLFVRTLREDPADAEVPSHRWLVRAGYIRRVA---PGVYSWLPLGLRVMRRIEAICREE 62

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           + +   +E++ P +L    ++++G W  Y  N+F +K      +      L P +     
Sbjct: 63  MANIGAQEVSFPALLASDPYKETGRWVEYGDNLFRLKD-----RKGVDMLLGPTHEEMFT 117

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +      SY++LP+ L +  + YR+E      G++R R F   DA+ F   ++  +E  
Sbjct: 118 LMVKDLYSSYKDLPLCLYQIQNKYRDEARPR-AGILRGREFVMMDAYSFDVAQEGLDEAY 176

Query: 406 KIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
           +      I I+   GF+  +VK  + P     S+     A
Sbjct: 177 QAQRDAYIRIFNRLGFDYAIVKAMSGPMGGSRSEEFLAVA 216



 Score = 74.4 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 59/162 (36%), Gaps = 8/162 (4%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I Q+            ++ + +    V +     G       I          
Sbjct: 423 RGIEIGHIFQLGKKYADALGLKVLDHNGKLVT-VTMGSYGLGVSRAVAAIAEGTCDEKGL 481

Query: 548 LWL---SP--IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            W    +P  +Q + T   +  ++ A  IA+ L    L +  D R  +   K  +  I  
Sbjct: 482 CWPREVAPYDVQVLATGKGTEILDEATRIASELAEAGLEVLLDDRKASPGVKFADSEILG 541

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P  ++ G +   +  + +R   +   ++VS+ +A+  + KE
Sbjct: 542 MPTSVVVG-RGLKDGLVEVRDRSTGENRQVSVAEAVCAVLKE 582


>gi|169830802|ref|YP_001716784.1| prolyl-tRNA synthetase [Candidatus Desulforudis audaxviator MP104C]
 gi|226699139|sp|B1I2J1|SYP_DESAP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|169637646|gb|ACA59152.1| prolyl-tRNA synthetase [Candidatus Desulforudis audaxviator MP104C]
          Length = 566

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 49/249 (19%), Positives = 92/249 (36%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  +        E+E   HR L +      I +  SGV        ++ + ++  +R 
Sbjct: 3   ASEYLIPTLREIPAEAEVVSHRLLLKAG---FIRKAASGVYTLLPLAHRVLRKIMRIIRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +EI  P +    LW +SG W  Y   +F +K      +  R F L P +    
Sbjct: 60  EMDRQGGQEILLPIMQPAELWLRSGRWHVYGPELFRLKD-----RHGRDFCLGPTHEEII 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    ++S+++LP+ L +  + YR+E      GL+R R F   D + F   E      
Sbjct: 115 TELVMGDVRSHKQLPLLLYQIQNKYRDERRPRF-GLLRGREFIMKDLYSFDRDEAGLEVS 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             K+      ++   G E   V+  + P     S      A +    V+   +++     
Sbjct: 174 YRKMFEAYQRVFSRCGLEFRPVEADSGPIGGSVSHEFMVLAGSGEALVVYCPEDACGYAA 233

Query: 464 NTGVLLGEG 472
           N        
Sbjct: 234 NVEKAESRA 242



 Score = 75.6 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 24/161 (14%), Positives = 54/161 (33%), Gaps = 9/161 (5%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G +  +           Y++ H     PV++     G        + +N      
Sbjct: 405 RGIEVGQVFKLGTKYSEVMGLTYLDEHGT-ERPVVMGCYGIGVTRTLAAAVEQNHDEQGI 463

Query: 548 LWLSPIQA------IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W + I         V          A++   +L    + +  D R E    K ++  + 
Sbjct: 464 IWPTAIAPFAVVVVPVNVRDEVQSALAEKAYTVLSEAGVEVLLDDRPERPGVKFKDADLV 523

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             P+ +  G K A +  + +R   +  T+ V + + +  + 
Sbjct: 524 GYPLRVTVG-KTAVDGLVELRLRKNGDTRLVGIGELVDTVR 563


>gi|325847870|ref|ZP_08170092.1| proline--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
 gi|325480888|gb|EGC83941.1| proline--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
          Length = 572

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 46/221 (20%), Positives = 95/221 (42%), Gaps = 11/221 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +   +       +++E + H+ L R   +   +   SGV  +   G ++   + + +R+ 
Sbjct: 4   SNYYMPTLRDDPQDAETQSHKLLVRGAFIRKTS---SGVYSYLPLGMRVINKIENIVRKS 60

Query: 287 IK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++  D  E++T  +  + +W++SG W ++   MF +K   D     R + L P       
Sbjct: 61  MEKYDSIEVSTSVLQSKDIWEKSGRWQNFGPEMFKIKDRHD-----REYCLGPTAEEQFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
           ++    L SY++LP+ L +  S +R+E      G+ R R F   DA+ F    E +    
Sbjct: 116 SLIKDELNSYKQLPLNLYQIVSKFRDEKRPRF-GINRSRDFIMKDAYSFDVDMEGLEKSY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
            K+ +  + ++   G +  +V+  +       S      AE
Sbjct: 175 QKMWDAYVEVFDALGLDYKIVEGDSGAMGGNTSHEFMALAE 215



 Score = 78.7 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 63/169 (37%), Gaps = 10/169 (5%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I Q+         A++++ +  K  P ++     G       I+ +N+  N  
Sbjct: 405 RGIEVGNIFQLGTKYSESLEAYFLDENG-KQKPFIMGSYGIGITRSISAIIEQNYDDNGI 463

Query: 548 LWLSPIQA------IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W + +        +V        + A++I   L    + +  D R E    K  +  + 
Sbjct: 464 IWPTKVAPFEAWITLVNKNKEDQKQLAEKIYESLLDQGIEVMLDDRKERAGVKFNDRDLV 523

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDC 650
             P  I  G K+AS+  +   +       K+S  +AI  +   S+  D 
Sbjct: 524 GCPYRITVG-KDASDDIVEFSKRSDMENLKMSSDEAIEKIVT-SIKEDL 570


>gi|288553027|ref|YP_003424962.1| prolyl-tRNA synthetase [Bacillus pseudofirmus OF4]
 gi|288544187|gb|ADC48070.1| prolyl-tRNA synthetase [Bacillus pseudofirmus OF4]
          Length = 572

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 46/222 (20%), Positives = 88/222 (39%), Gaps = 11/222 (4%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
            H+ + R   +  IA    GV  +     ++   + S +R ++     +E+  P +    
Sbjct: 22  SHQLMLRAGMIRQIAA---GVYSYLPLAKRVLHKVESIVREEMDAAGAQELTMPTMHPAE 78

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LWQ++G WD     +  +K   D     R FAL P +     ++    + SY++LPV L 
Sbjct: 79  LWQETGRWDKMGGELMRLKDRHD-----RDFALGPTHEEVITSILRDSISSYKKLPVNLY 133

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKDFGFEK 422
           +  + +R+E      GL+R R F   DA+ F  T E +     ++++    I+   G   
Sbjct: 134 QIQTKFRDERRPRF-GLLRGREFMMKDAYSFHATPESLDEAYKEMYDAYSRIFSRAGLTF 192

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
             V   +       +      A+     +  + ++     I 
Sbjct: 193 RPVIADSGAIGGKDTHEFMALADVGEDTIAYSDESDYAANIE 234



 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 61/153 (39%), Gaps = 8/153 (5%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL---SPIQ 554
           +        NA  ++ +  K  P+++     G       I+ ++   N  +W    +P  
Sbjct: 413 LGTVYSEAMNATILDENG-KTQPMIMGCYGVGVSRTVAAIIEQHHDENGIVWPPSVAPYD 471

Query: 555 AIVTTITS---SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
             + T+ S      E ++E+   LK     +  D R E    K ++  +  IP+ +  G 
Sbjct: 472 VHLLTLNSKNAEQSELSEELYQSLKKTGFDVLYDDRPERAGVKFKDSDLIGIPLRVSVGK 531

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           + A+E  + ++   S    +V++ D   +L  +
Sbjct: 532 R-AAEGIVEVKIRKSGEVIEVAVADLAEVLKTQ 563


>gi|126654116|ref|ZP_01725934.1| prolyl-tRNA synthetase [Bacillus sp. B14905]
 gi|126589396|gb|EAZ83546.1| prolyl-tRNA synthetase [Bacillus sp. B14905]
          Length = 568

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 47/221 (21%), Positives = 92/221 (41%), Gaps = 11/221 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++E + H++L R      I ++ SGV  +     ++   + + +R +
Sbjct: 4   SKTFIPTLREVPADAEVKSHKQLLRAG---FIRQNTSGVYSYLPLAKRVLSKIETIIREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++  +  E+  P +    LWQ+SG W+ Y   +  +K   D     R FAL P +     
Sbjct: 61  MEAINSIELLMPSLQSAELWQESGRWEKYGPELMRLKDRHD-----RDFALGPTHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +    +KSY++LP+ L +  + +R+E      GL+R R F   DA+ F    E +    
Sbjct: 116 TLVRDEIKSYKKLPLTLYQIQTKFRDEKRPRF-GLLRGREFIMKDAYSFHASRESLDETY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
             ++    +I+   G     V          G+      +E
Sbjct: 175 DDMYRAYSNIFSRLGLNYRAVIADAGSIGGKGTHEFMVLSE 215



 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 58/153 (37%), Gaps = 10/153 (6%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPI 553
           +     ++ N  +++    K  P ++     G   R +  + E+F+       P  L+P 
Sbjct: 414 LGTTYSAKMNGTFLDEQG-KSQPFIMGCYGIGVS-RILAAVAEHFQDENGFTWPTQLAPY 471

Query: 554 QAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
              V  +     + V  A E+  LLKS+   +  D R E    K  +  +  +P+ +  G
Sbjct: 472 DIHVVPVNTKDEAQVALADELYGLLKSYRYDVLLDDRAERAGVKFADADLIGLPVRVTVG 531

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            K      + ++   +  T +    + I  L +
Sbjct: 532 KKAIE-GIVEVKFRQTGETFEWKKEEVIDHLNE 563


>gi|224058287|ref|XP_002194154.1| PREDICTED: prolyl-tRNA synthetase 2, mitochondrial (putative)
           [Taeniopygia guttata]
          Length = 470

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 70/410 (17%), Positives = 145/410 (35%), Gaps = 33/410 (8%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I     G   +     +  + LI  M  +++    +++N P +    LW+ SG WD    
Sbjct: 74  IHPTSPGCYCYLPPTVRAMEKLIQLMDEEMQAVGGQKLNLPSLCSAELWRASGRWDQMGP 133

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL-KSYRELPVRLAEFGSVYRNEPSG 375
            +F +    D       + L P +     A+       SY++LP+RL +    +R+EP  
Sbjct: 134 ELFRLVDRHDHG-----YCLGPTHEEVVTALVASQTGLSYKQLPLRLYQVTRKFRDEPKP 188

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              GL+R R F   D + F + E+       ++     S++   G   + V+ +T     
Sbjct: 189 RF-GLLRSREFYMKDMYTFDSSEEAARRTYEQVCAAYCSLFARLGLPFVKVQAATGSIGG 247

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
             S      A+     +L   +     ++ T       A   P     L +  G +    
Sbjct: 248 STSHEFQLPADIGEDRLLLCPQGHFAAKVETLNREQPRA---PTCGEKLTETKGIEV-GH 303

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG-SIERFIGIMIE----NFKGNLPLW 549
           T  +     S  NA + ++ ++   P +     +G  + R +   IE          P  
Sbjct: 304 TFYLGTKYSSVANAVFSSAENK---PQLAEMGCYGLGVTRILAASIEVLSTEDSIRWPSL 360

Query: 550 LSPIQAIVTT------ITSSAVEYAQEIANLLKSH-----HLSIETDFRNETINYKIREH 598
           ++P Q                    + + + L+         S+  D    TI  ++++ 
Sbjct: 361 IAPYQLCFIPPKRGSKEEEEGAALLERVYDELEEALPHLAGDSVLDDRSQLTIGKRLKDA 420

Query: 599 SIKKIPIIIICGDKEASERSI-GIRRFGSTTTQKVSLLDAIPILTKESLP 647
                P +++ G +   +  +  +    ++    ++    I +L+K  +P
Sbjct: 421 KRLGYPYVVVAGKRVCEDPPVFEVWNQNASEVLFLTKEGVIELLSKVQVP 470


>gi|169827162|ref|YP_001697320.1| prolyl-tRNA synthetase 1 [Lysinibacillus sphaericus C3-41]
 gi|226701308|sp|B1HQZ9|SYP_LYSSC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|168991650|gb|ACA39190.1| Prolyl-tRNA synthetase 1 [Lysinibacillus sphaericus C3-41]
          Length = 568

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 47/221 (21%), Positives = 92/221 (41%), Gaps = 11/221 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++E + H++L R      I ++ SGV  +     ++   + + +R +
Sbjct: 4   SKTFIPTLREVPADAEVKSHKQLLRAG---FIRQNTSGVYSYLPLAKRVLSKIETIIREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++  +  E+  P +    LWQ+SG W+ Y   +  +K   D     R FAL P +     
Sbjct: 61  MEAINSIELLMPSLQSAELWQESGRWEKYGPELMRLKDRHD-----RDFALGPTHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +    +KSY++LP+ L +  + +R+E      GL+R R F   DA+ F    E +    
Sbjct: 116 TLVRDEIKSYKKLPLTLYQIQTKFRDEKRPRF-GLLRGREFIMKDAYSFHASRESLDETY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
             ++    +I+   G     V          G+      +E
Sbjct: 175 DDMYRAYSNIFSRLGLNYRAVIADAGSIGGKGTHEFMVLSE 215



 Score = 74.4 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 61/153 (39%), Gaps = 10/153 (6%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPI 553
           +     ++ N  +++    K  P ++     G   R +  + E+F+       P  L+P 
Sbjct: 414 LGTTYSAKMNGTFLDEQG-KSQPFIMGCYGIGVS-RILAAVAEHFQDENGFTWPTQLAPY 471

Query: 554 QAIVTTITSS---AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
              V  + +     V  A E+  LLKS+   +  D R E    K  +  +  +P+ +  G
Sbjct: 472 DIHVVPVNTKDEVQVALADELYGLLKSYRYDVLLDDRAERAGVKFADADLIGLPVRVTVG 531

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            K A+E  + ++   +  T +    + I  L +
Sbjct: 532 KK-ATEGIVEVKFRQTGETFEWKKEEVIDRLNE 563


>gi|220928860|ref|YP_002505769.1| ATPase AAA [Clostridium cellulolyticum H10]
 gi|219999188|gb|ACL75789.1| AAA ATPase [Clostridium cellulolyticum H10]
          Length = 552

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 54/217 (24%), Positives = 96/217 (44%), Gaps = 4/217 (1%)

Query: 1   MPS-DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GS 58
           M +  I +T  +          T  ++++   +      VA  +N  + +LS  ++E   
Sbjct: 1   MSNNQIFVTI-NNQRYELEDSTTLLELSKRFEKEYVSTIVAARVNNDIKELSFEIKENAE 59

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           I  +   D   + + R S   I   AVQ ++P+ +  I   + +G Y + + +   S D+
Sbjct: 60  ISFLDLTDEDGMRIYRRSLYFIFIMAVQDVFPDRKAVISHPMSNGVYCEINGKDELSEDD 119

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           +  +EK+M+EI A   PF K+ +S E AR+L++   +  K E+LE    K  VT Y  G 
Sbjct: 120 VELVEKRMREIAAGKMPFEKKEISTESARKLYKESGKLDKYEVLEH-RQKPYVTFYNCGG 178

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRP 215
           + +   G  V  TG +  F       G   +  S + 
Sbjct: 179 YENYYYGYMVPDTGYINCFALKFHKPGVVIQFPSRKE 215


>gi|300933077|ref|ZP_07148333.1| prolyl-tRNA synthetase [Corynebacterium resistens DSM 45100]
          Length = 592

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 41/230 (17%), Positives = 88/230 (38%), Gaps = 11/230 (4%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +        GV  W   G ++ + + + +R ++     +E++ P 
Sbjct: 19  DAEVPSHKLLVRAGYIR---RAAPGVYSWLPLGLRVLRKVENVVRNEMDAIGAQELSFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++ +G W  Y   +  +K      +    + L P +     +V      SY++ 
Sbjct: 76  LLPREPYETTGRWTEYGDALLRLKD-----RKGADYLLGPTHEEMFTSVVKGEYNSYKDF 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKD 417
           PV L +  + YR+E      G++R R F   D++ F   ++        H      I+  
Sbjct: 131 PVTLYQIQNKYRDEERPR-AGILRGREFIMKDSYSFDMDDEGLERSYHKHREAYQKIFDT 189

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGV 467
            G +  +   ++       S+     AEN     + +  +     +   V
Sbjct: 190 LGVQYAICAATSGAMGGSASEEFLAVAENGEDTFVRSTGSDYAANVEAVV 239



 Score = 81.4 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 28/167 (16%), Positives = 73/167 (43%), Gaps = 11/167 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG--- 544
           R  + G I Q+       F+   ++ + ++  P M    +   + R + ++ E       
Sbjct: 429 RGIEIGHIFQLGRKYTEAFDVQILDENGKRAVPTMGSYGI--GVSRLVAVLAEQMHDEYG 486

Query: 545 -NLPLWLSP--IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSI 600
              P+ ++P  +  ++    ++A E A+++   L S  L +  D R + +   K ++  +
Sbjct: 487 LRWPVAVAPYDVHVVIANKDAAAAEAAEKLTTELSSTGLDVLIDDRPKVSPGVKFKDSEL 546

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLP 647
             +P++++ G +  +E  + +R   S    +V+  DA+  + ++   
Sbjct: 547 LGMPLVVVVG-RGFAEGKVELRNRLSGDKLEVAYEDAVSAVQQQLTA 592


>gi|83720100|ref|YP_441693.1| prolyl-tRNA synthetase [Burkholderia thailandensis E264]
 gi|167618612|ref|ZP_02387243.1| prolyl-tRNA synthetase [Burkholderia thailandensis Bt4]
 gi|257137862|ref|ZP_05586124.1| prolyl-tRNA synthetase [Burkholderia thailandensis E264]
 gi|114152178|sp|Q2SZF6|SYP_BURTA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|83653925|gb|ABC37988.1| prolyl-tRNA synthetase [Burkholderia thailandensis E264]
          Length = 578

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 45/207 (21%), Positives = 84/207 (40%), Gaps = 11/207 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ + R   +  +A    G+  +   G +  + + + +R ++      E+  P 
Sbjct: 17  DAEIVSHKLMVRAGMIRRVA---GGIYNYLPVGLRSIRKVEAIVREEMNRAGAIELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    LWQ+SG W+ Y   +   K      +    F + P +      +  + +KSYR++
Sbjct: 74  VQPAELWQESGRWEQYGPELLRFKD-----RKQNEFVIGPTHEEVVTDIARNQIKSYRQM 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKD 417
           PV   +  + +R+E      G+MR R F   DA+ F    +   E   K+++  + I+  
Sbjct: 129 PVNFYQIQTKFRDEIRPRF-GVMRGREFIMKDAYSFDKDHESLKESYKKMYDAYVRIFTR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDA 444
            G E   V          GS      A
Sbjct: 188 IGLEFRPVAADNGSIGGSGSHEFHVIA 214



 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 60/164 (36%), Gaps = 11/164 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNL 546
           R  + G + Q+         A +++    K  P+++     G   R +G  IE NF    
Sbjct: 409 RGIEVGHVFQLGTKYSDAMGATFIDESG-KAQPMVMGCYGIGVT-RILGAAIEQNFDDKG 466

Query: 547 PLWL---SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
            +W    +P + ++  +    + +  E A ++   L +  + +  D R E       +  
Sbjct: 467 IIWPEAIAPFEVVLCPMGYDRSDAVREAADKLYADLAAAGIDVILDDRGERPGVMFADWE 526

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  +P  ++ G++   +  I  +         +    A   + +
Sbjct: 527 LIGVPHRLVIGERGLKDGKIEYQGRRDAEATLLPADSAATAVAE 570


>gi|262276504|ref|ZP_06054313.1| prolyl-tRNA synthetase [Grimontia hollisae CIP 101886]
 gi|262220312|gb|EEY71628.1| prolyl-tRNA synthetase [Grimontia hollisae CIP 101886]
          Length = 571

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 54/266 (20%), Positives = 104/266 (39%), Gaps = 16/266 (6%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  L+       ++E   H+ + R   +  +A   SG+  W   G ++ Q + + +R+
Sbjct: 3   TSKYLLSTLKETPNDAEVVSHQLMLRAGMIRKLA---SGLYTWLPTGLRVLQKVENIVRQ 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           +I +    E   P V    LW+++G  +     +        T +  R F L P      
Sbjct: 60  EINNAGAIETLMPVVQPFELWEETGRSEKMGPELLRF-----TDRHERPFVLSPTAEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
            ++  + + SY++LP+ L +  + +R+E      G+MR R F+  DA+ F    E +   
Sbjct: 115 TSLVRNEVNSYKQLPLNLYQIQTKFRDEVRPRF-GVMRAREFSMMDAYSFDLDKEGLQKS 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA---ENIMKGVLDTIKNSSQ 460
              +H    + +   G +   V   T       S      A   E+I+    ++   ++ 
Sbjct: 174 YEAMHTAYCAAFDRMGLDYRPVLADTGAIGGSASHEFHVLANSGEDIIAFSSESDYAANI 233

Query: 461 DRINTGVLLGEGAFYGPKFEYILKDA 486
           +        GE A   P  E  L D 
Sbjct: 234 EMAEAVAPAGERA--APTQEMTLVDT 257



 Score = 82.5 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 26/166 (15%), Positives = 59/166 (35%), Gaps = 13/166 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           + R  + G I Q+  N   +     + +  +    V++    +G  + R +   IE N  
Sbjct: 405 LKRGIEVGHIFQLGTNYSEKMGCGVLGADGKN---VILEMGCYGIGVSRVVAAAIEQNHD 461

Query: 544 GNLPLWL---SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
            N  +W    +P    +  +    +    + A+++   L +  + +  D R E       
Sbjct: 462 ENGIIWPDAIAPFTVAIVPMNMHKSERVKDAAEKLYAELTAAGIEVLFDDRKERPGVMFS 521

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +  +  IP  II G++         +   +     V + + +  L 
Sbjct: 522 DMELIGIPHTIIIGERSMDNGVFEYKHRRNGEKVPVDMENMVEFLK 567


>gi|294675236|ref|YP_003575852.1| phosphoribulokinase/uridine kinase family protein [Prevotella
           ruminicola 23]
 gi|294473660|gb|ADE83049.1| phosphoribulokinase/uridine kinase family protein [Prevotella
           ruminicola 23]
          Length = 561

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 45/249 (18%), Positives = 100/249 (40%), Gaps = 7/249 (2%)

Query: 4   DIKLTFPDGSI-KNFPVHATGSDVAESISRSL--AKKAVAVAINGKVCDLSDPVREG-SI 59
            + +   + +I K+FP   + +DV ++ +  L      V+  +N     L   + +   +
Sbjct: 1   MLHIRCKNNNITKSFPEGTSLADVYQAFASELNFKYPVVSAKVNNASQGLKFRLYQNRDV 60

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF--DKEQPFSSD 117
           E +         V   S   ++ +A   ++P  ++ +   I +G+Y +F     +P + +
Sbjct: 61  EFLDARSGSGRRVYTRSLCFVLYKATSDVFPGSKLYMEHPISNGYYCNFKKKNNEPLTDE 120

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           ++ +I ++M+EI+  D PF +   + ++A  +F  +  A KV+++E+   +     Y  G
Sbjct: 121 DVQKICQRMKEIVDLDLPFRRTEATTDEAVRVFSERGFADKVKLIET-SGQIYTDYYMLG 179

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           +  D   GP V S G +K +       G   R                    E+      
Sbjct: 180 DTVDYYYGPLVPSAGFLKVWGLERYHDGLLLRVPDKNDPTKLAEKVDMPRTFEVFAEKVR 239

Query: 238 LEESEKRDH 246
            +   +  +
Sbjct: 240 WDIIMRLSN 248


>gi|186477394|ref|YP_001858864.1| prolyl-tRNA synthetase [Burkholderia phymatum STM815]
 gi|226699127|sp|B2JHD3|SYP_BURP8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|184193853|gb|ACC71818.1| prolyl-tRNA synthetase [Burkholderia phymatum STM815]
          Length = 578

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 53/287 (18%), Positives = 105/287 (36%), Gaps = 13/287 (4%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ + R   +  +A    G+  +   G +  + + + +R ++      E+  P 
Sbjct: 17  DAEIVSHKLMVRAGMIRRVA---GGIYNYLPIGLRSIRKVEAIVREEMNRAGAIELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    LWQ+SG W+ Y   +   K    +      F + P +      +    +KSYR+L
Sbjct: 74  VQPAELWQESGRWEKYGPELLRFKDRKQS-----DFVIGPTHEEVVTDIARGQIKSYRQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKD 417
           PV   +  + +R+E      G+MR R F   DA+ F    + +     K+++  + I+  
Sbjct: 129 PVNFYQVQTKFRDEIRPRF-GVMRGREFIMKDAYSFDKDMDGLRESYRKMYDAYVRIFTR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY-G 476
            G +   V          GS      A+     +     +     +     L   A    
Sbjct: 188 LGLDFRAVAADNGSIGGSGSHEFHVIADTGEDDIAYCPTSDFASNVEAAEALPLIAERAA 247

Query: 477 PKFEYILKDAIGR-DWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
           PK E       G+   +     ++  L     +  + + +E   P +
Sbjct: 248 PKEELRKTSTPGKAKCEAVAEHLNIPLEKTIKSIILATENEGAEPTI 294



 Score = 82.1 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 26/165 (15%), Positives = 62/165 (37%), Gaps = 13/165 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGN 545
           R  + G + Q+        NA +++   +   P  +    +G  I R +G  IE NF   
Sbjct: 409 RGIEVGHVFQLGTKYSEAMNATFLDESGK---PQPMQMGCYGIGITRILGAAIEQNFDDK 465

Query: 546 LPLWL---SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
             +W    +P + ++  +    + +  E A ++ + L +  + +  D R E       + 
Sbjct: 466 GIIWPESIAPFEVVLCPMGYDRSDAVREQADKLHDELTAAGIDVILDDRGERPGVMFADW 525

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +  +P  ++ G++   +  I  +         + +  A   +  
Sbjct: 526 ELIGVPHRLVIGERGLKDGKIEYQGRRDAEATLLPVEAAAQAVID 570


>gi|295396369|ref|ZP_06806535.1| proline--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030]
 gi|294970809|gb|EFG46718.1| proline--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030]
          Length = 609

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 40/199 (20%), Positives = 84/199 (42%), Gaps = 11/199 (5%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQ 302
           + H+ L R   +        G+  W   G ++   + + +R ++ K   +E++ P +L  
Sbjct: 23  KSHKLLHRASYIR---RSAPGIYTWLPLGLRVLDKVEAIVRDEMSKAGSQEVHFPALLPA 79

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             +++SG W+++   +F ++      +    + L P +      +      SY++LP  L
Sbjct: 80  EPYEKSGRWEAFGEGIFRLQD-----RKKADYLLAPTHEEVFTLLVKDLYSSYKDLPASL 134

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFE 421
            +  + YR+E      GL+R R F   DA+ F T +   +    K+    I++Y      
Sbjct: 135 YQIQTKYRDEARPR-AGLLRGREFIMKDAYSFDTDDAGLDAAYEKMRKAYINVYNRLQLP 193

Query: 422 KIMVKLSTRPEKRVGSDAL 440
            +MV+ +       G+   
Sbjct: 194 FVMVEATPGAMGGSGTHEF 212



 Score = 70.6 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 25/181 (13%), Positives = 61/181 (33%), Gaps = 9/181 (4%)

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVM 522
           +  +   E     P  +   +  + R  + G I  +            ++ +  K   V 
Sbjct: 408 DEFIEAAEVVAGDPAPDGSGELQLARGVEIGQIFKLGTRYAEALGLSVLDENG-KARVVT 466

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLW---LSPIQAIVTTITSSAV--EYAQEIANLLKS 577
           +     G       I  E+      +W   L+P    +      A   + A+E+   ++ 
Sbjct: 467 MGSYGIGVSRVLACIAEEHADDKGLVWPANLAPADVHIVATGKDAQVFDVAEELTAEVEK 526

Query: 578 HHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
              ++  D R + +   K  +  +  +P I++ G +   +  + +R   +  T  + +  
Sbjct: 527 AGYTVLLDDRPKVSPGMKFGDAELLGMPTIVVVG-RGLKDGVVELRDRATGETTNLPVDT 585

Query: 637 A 637
           A
Sbjct: 586 A 586


>gi|237813889|ref|YP_002898340.1| proline--tRNA ligase [Burkholderia pseudomallei MSHR346]
 gi|237505775|gb|ACQ98093.1| proline--tRNA ligase [Burkholderia pseudomallei MSHR346]
          Length = 578

 Score =  139 bits (350), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 54/287 (18%), Positives = 106/287 (36%), Gaps = 13/287 (4%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ + R   +  +A    G+  +   G +  + + + +R ++      E+  P 
Sbjct: 17  DAEIVSHKLMVRAGMIRRVA---GGIYNYLPVGLRSIRKVEAIVREEMNRAGAIELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    LWQ+SG W+ Y   +   K      +    F + P +      +  + +KSYR++
Sbjct: 74  VQPAELWQESGRWEQYGPELLRFKD-----RKQNEFVIGPTHEEVVTDIARNQIKSYRQM 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKD 417
           PV   +  + +R+E      G+MR R F   DA+ F    +   E   K+++  + I+  
Sbjct: 129 PVNFYQIQTKFRDEIRPRF-GVMRGREFIMKDAYSFDKDHESLKESYKKMYDAYVRIFTR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
            G E   V          GS      A+     +     +     +     L   A    
Sbjct: 188 IGLEFRPVAADNGSIGGSGSHEFHVIADTGEDAIAYCPTSDFAANVEAAEALPLLASRAA 247

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLP--SRFNAFYVNSHSEKCHPVM 522
             E + K A     +C  +     +P      +  + + +E   P +
Sbjct: 248 PAEVMQKVATPGKAKCEAVAELMGIPLERTIKSIVLATDNEGAEPTI 294



 Score = 76.7 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 23/154 (14%), Positives = 57/154 (37%), Gaps = 11/154 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE----NFK 543
           R  + G + Q+         A +++    K  P+++     G I R +G  IE    +  
Sbjct: 409 RGIEVGHVFQLGTKYSDAMGATFIDESG-KAQPMVMGCYGIG-ITRILGAAIEQNFDDKG 466

Query: 544 GNLPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
              P  ++P + ++  +    + +  E A ++   L +  + +  D R E       +  
Sbjct: 467 IVWPEAIAPFEVVLCPMGYDRSDAVREAADKLYADLAAAGIDVILDDRGERPGVMFADWE 526

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
           +  +P  ++ G++   +  I  +         + 
Sbjct: 527 LIGVPHRLVIGERGLKDGKIEYQGRRDAEATLLP 560


>gi|167036776|ref|YP_001664354.1| prolyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|320115198|ref|YP_004185357.1| prolyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
 gi|226701349|sp|B0KCH5|SYP_THEP3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|166855610|gb|ABY94018.1| prolyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|319928289|gb|ADV78974.1| prolyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
          Length = 570

 Score =  139 bits (350), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 46/216 (21%), Positives = 92/216 (42%), Gaps = 11/216 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  +        E+E   H  + +   +  +A   SGV  +   G ++ + +   +R +
Sbjct: 4   SQLLVPTLREIPAEAEIPSHILMLKAALMRKLA---SGVYIYLPLGQRVLRKVEQIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E+    ++   L ++SG WD +   MF +K  ++     R F L P +     
Sbjct: 61  MDRAGSQEVLMSALIPAELLKESGRWDVFGPEMFKLKDRNE-----RDFCLGPTHEEVFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +  + +KSYR+LP+ L +  + +R+E      G+MR R F   DA+ F    E +    
Sbjct: 116 DLIRNEVKSYRQLPLILYQIQTKFRDERRPRF-GVMRSREFIMKDAYSFDMDWEGLDKSF 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            K++     I+   G + ++V+  +       S   
Sbjct: 175 NKMYEAYCRIFDRCGLKYLVVEADSGAMGGKDSKEF 210



 Score = 89.5 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 28/164 (17%), Positives = 60/164 (36%), Gaps = 9/164 (5%)

Query: 487 IGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           I R  + G I  +         A YV+    +  P+++     G       I+ ++    
Sbjct: 403 IDRGIEVGHIFKLGTKYSDALGAKYVDEEGNEK-PIIMGCYGIGINRTVAAIIEQHHDEK 461

Query: 546 LPLWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
             +W    +P   I+  +     +    A++I   L+   + +  D R+     K  +  
Sbjct: 462 GIIWPMSVAPYHVIIVPVNVSNEAQNRVAEDIYAALQKEGIEVLIDDRDLRAGVKFNDAD 521

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  IPI I  G K   +  + I+   +   ++V + D +  +  
Sbjct: 522 LLGIPIRITVGKK-VDDGIVEIKLRENEEAEEVKISDVVEKVKN 564


>gi|299823039|ref|ZP_07054925.1| proline--tRNA ligase [Listeria grayi DSM 20601]
 gi|299816568|gb|EFI83806.1| proline--tRNA ligase [Listeria grayi DSM 20601]
          Length = 566

 Score =  139 bits (350), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 49/244 (20%), Positives = 92/244 (37%), Gaps = 27/244 (11%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E ++H+ L R   +   A   SGV  +        + +   +R ++      EI  P 
Sbjct: 17  DAEVKNHQLLLRAGFIRQTA---SGVYSYLPLATLTLRNIERIIREELNKVGASEILMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW++SG W  Y   +  +K  ++     R FAL P +     A+    +KSY+ L
Sbjct: 74  LQPAELWEESGRWADYGPELMRLKDRNN-----RDFALGPTHEEVITALLRDEIKSYKRL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKD 417
           P+ L +  + +R+E      GL+R R F   DA+ F    E +      ++    +I+  
Sbjct: 129 PLTLYQIQTKFRDEKRPRF-GLLRGREFIMKDAYSFHADLESLDKTYQDMYTAYSNIFTR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
            G +    +        +G     +         L  I   +       +   + + Y  
Sbjct: 188 CGLD---FRAVIADSGSIGGKETKEFM------ALSAIGEDT-------IAYSDTSDYAA 231

Query: 478 KFEY 481
             E 
Sbjct: 232 NIEM 235



 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 24/135 (17%), Positives = 51/135 (37%), Gaps = 7/135 (5%)

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW---LSPIQAIVTTIT---SSAVE 566
             + + +P+++     G       I  +N   N  +W   +SP    +  +         
Sbjct: 428 DENGRANPIIMGCYGIGVSRVLSAIAEQNADENGLVWDREISPFDLHLIPVNMKNEEQAS 487

Query: 567 YAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS 626
           +A+E+   L+    ++  D R E    K  +  +  +PI I  G K A E  + ++   +
Sbjct: 488 FAEELYVSLQESGFTVLFDDRAERAGVKFADADLIGLPIRITVGKK-ADEGIVEVKIRKT 546

Query: 627 TTTQKVSLLDAIPIL 641
               +V   + +  L
Sbjct: 547 GEMIEVKKEELLNTL 561


>gi|237713934|ref|ZP_04544415.1| uridine kinase [Bacteroides sp. D1]
 gi|262409158|ref|ZP_06085702.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|294806523|ref|ZP_06765363.1| phosphoribulokinase/uridine kinase family protein [Bacteroides
           xylanisolvens SD CC 1b]
 gi|298482250|ref|ZP_07000437.1| phosphoribulokinase family protein [Bacteroides sp. D22]
 gi|229446090|gb|EEO51881.1| uridine kinase [Bacteroides sp. D1]
 gi|262352905|gb|EEZ02001.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|294446281|gb|EFG14908.1| phosphoribulokinase/uridine kinase family protein [Bacteroides
           xylanisolvens SD CC 1b]
 gi|295085281|emb|CBK66804.1| Uridine kinase [Bacteroides xylanisolvens XB1A]
 gi|298271537|gb|EFI13111.1| phosphoribulokinase family protein [Bacteroides sp. D22]
          Length = 557

 Score =  139 bits (350), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 43/217 (19%), Positives = 95/217 (43%), Gaps = 3/217 (1%)

Query: 1   MPSDIKLTFPDGSI-KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-S 58
           M   +++   + +I K FP+ ++  D+    + +   + V+  +N +   L+  V     
Sbjct: 1   MKQMLQICCKNNNISKEFPIGSSLLDIYYGFNLNFPYQVVSAKVNNRSEGLNFRVYNNKD 60

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           +E +   D   +     S   ++ +AV  ++P+ ++ +   +  G++ +    +P   ++
Sbjct: 61  VEFLDVRDQSGMRTYVRSLCFVLFKAVTELFPDGKLFVEHPVSKGYFCNLRIGRPIELED 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           + +I+++MQEIIA +  + +      +A  +F  +    KV +LE+         Y  G+
Sbjct: 121 VTRIKQRMQEIIAENISYHRIECHTAEAVRVFSERGMNDKVRLLET-SGSLYTYYYTLGD 179

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRP 215
             D   G  + STG +K F  +    G   R  S   
Sbjct: 180 TIDYYYGNLLPSTGYLKLFDIVKYYDGLLLRIPSREN 216


>gi|167580503|ref|ZP_02373377.1| prolyl-tRNA synthetase [Burkholderia thailandensis TXDOH]
          Length = 578

 Score =  139 bits (350), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 45/207 (21%), Positives = 84/207 (40%), Gaps = 11/207 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ + R   +  +A    G+  +   G +  + + + +R ++      E+  P 
Sbjct: 17  DAEIVSHKLMVRAGMIRRVA---GGIYNYLPVGLRSIRKVEAIVREEMNRAGAIELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    LWQ+SG W+ Y   +   K      +    F + P +      +  + +KSYR++
Sbjct: 74  VQPAELWQESGRWEQYGPELLRFKD-----RKQNEFVIGPTHEEVVTDIARNQIKSYRQM 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKD 417
           PV   +  + +R+E      G+MR R F   DA+ F    +   E   K+++  + I+  
Sbjct: 129 PVNFYQIQTKFRDEIRPRF-GVMRGREFIMKDAYSFDKDHESLKESYKKMYDAYVRIFTR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDA 444
            G E   V          GS      A
Sbjct: 188 IGLEFRPVAADNGSIGGSGSHEFHVIA 214



 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 60/164 (36%), Gaps = 11/164 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNL 546
           R  + G + Q+         A +++    K  P+++     G   R +G  IE NF    
Sbjct: 409 RGIEVGHVFQLGTKYSDAMGATFIDESG-KAQPMVMGCYGIGVT-RILGAAIEQNFDDKG 466

Query: 547 PLWL---SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
            +W    +P + ++  +    + +  E A ++   L +  + +  D R E       +  
Sbjct: 467 IIWPEAIAPFEVVLCPMGYDRSDAVREAADKLYADLAAAGIDVILDDRGERPGVMFADWE 526

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  +P  ++ G++   +  I  +         +    A   + +
Sbjct: 527 LIGVPHRLVIGERGLKDGKIEYQGRRDAEATLLPADSAATAVAE 570


>gi|332881459|ref|ZP_08449108.1| phosphoribulokinase/uridine kinase family protein [Capnocytophaga
           sp. oral taxon 329 str. F0087]
 gi|332680457|gb|EGJ53405.1| phosphoribulokinase/uridine kinase family protein [Capnocytophaga
           sp. oral taxon 329 str. F0087]
          Length = 553

 Score =  139 bits (350), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 53/242 (21%), Positives = 98/242 (40%), Gaps = 3/242 (1%)

Query: 1   MPSDIKLTFPDGSI-KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGS 58
           M  +IK+   +       P+ +T  D   +++  +    V+  +N KV  L      +  
Sbjct: 1   MVQEIKIRCKNNKKTLQLPIGSTLWDAYHALNLQMPYGPVSAKVNNKVEGLHYRFYNDKD 60

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           +E +       +     S   ++ +AV+ ++PE  + I   +  G+Y D    +P   D+
Sbjct: 61  VEFLDVTSSSGMRTYTRSLFFVLVKAVKDLFPECVLRIETPVSRGYYCDLRIGRPIEEDD 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           +  I ++M+EI+  D PF +     E A E+F  +    KV +LES  A      Y+  +
Sbjct: 121 VTAIWRRMREIVDADIPFHRIQSPTEDAIEMFRRQGMTSKVRLLESYGAIYTH-YYQLDQ 179

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             D   G  + STG +K F  +    G   R  S +               E+ +  +  
Sbjct: 180 TVDYFYGSLLTSTGGLKVFDVMKYYDGLLLRIPSRKNPEKLEEMVHQEKMLEIFREHHRW 239

Query: 239 EE 240
           +E
Sbjct: 240 QE 241


>gi|323457093|gb|EGB12959.1| hypothetical protein AURANDRAFT_18779 [Aureococcus anophagefferens]
          Length = 606

 Score =  139 bits (350), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 58/418 (13%), Positives = 132/418 (31%), Gaps = 73/418 (17%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
            +  + R  DL   +     ++     G  ++  L   +  +IK    E    P ++ + 
Sbjct: 124 WYADVIRGADLVDASPVKGCMVI-KPWGMAVWDRLRDELDGRIKASGAENAYFPLLIPRS 182

Query: 304 LWQQSG---HWDSYRANMFAVKC------------ADDTIKDLRTFALKPMNCPGHVAVF 348
              +     H + +      V               D   +      ++P +      +F
Sbjct: 183 FLAKEAEHCHVEGFAKECAVVTHHRLAADGKGGLEPDPAAELDEPLIIRPTSETMIWHMF 242

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKI 407
              + S+R+LP+++ ++ +V R E        +R   F   + H    T+++      ++
Sbjct: 243 GKWINSHRDLPLKINQWANVVRWEMR--TRPFLRSSEFLWQEGHTAHATRDEALATAEEM 300

Query: 408 HNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGV 467
            ++   + + F    ++    +  E+  G+D  +                          
Sbjct: 301 LDVYAEVVEHFLAVPVVRGAKSAIERFAGADETY-------------------------- 334

Query: 468 LLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAV 527
                       E ++ +      Q GT        +R  AF V   ++     ++    
Sbjct: 335 ----------TIEALMPNGW--ALQSGTSHFLGQNFAR--AFDVQFQNKDAKRELVWATS 380

Query: 528 FGSIERFIGIMIENFKGNLPLWLSPIQAIVTTI------------TSSAVEYAQEIANLL 575
           +G   R +G ++     +  L L P  A V               T +       +    
Sbjct: 381 WGVSTRLLGALVMTHSDDAGLVLPPRVAPVQVAVVPITRKNDDAGTEAVDALVDGLVAEC 440

Query: 576 KSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
           K+  + ++ D R N     K  E   K +P+ +  G ++A+E  + +        + V
Sbjct: 441 KALGVRVKVDERPNMRPGAKFFEWERKGVPLRVEVGPRDAAEGVVVVASRLGGEKRSV 498


>gi|53726087|ref|YP_104063.1| prolyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
 gi|238561266|ref|ZP_00442346.2| proline--tRNA ligase [Burkholderia mallei GB8 horse 4]
 gi|254202783|ref|ZP_04909146.1| prolyl-tRNA synthetase [Burkholderia mallei FMH]
 gi|254208125|ref|ZP_04914475.1| prolyl-tRNA synthetase [Burkholderia mallei JHU]
 gi|81823924|sp|Q62GV8|SYP_BURMA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|52429510|gb|AAU50103.1| prolyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
 gi|147747030|gb|EDK54107.1| prolyl-tRNA synthetase [Burkholderia mallei FMH]
 gi|147752019|gb|EDK59086.1| prolyl-tRNA synthetase [Burkholderia mallei JHU]
 gi|238524974|gb|EEP88404.1| proline--tRNA ligase [Burkholderia mallei GB8 horse 4]
          Length = 578

 Score =  139 bits (350), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 46/207 (22%), Positives = 85/207 (41%), Gaps = 11/207 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ + R   +  +A    G+  +   G +  + + + +R ++      E+  P 
Sbjct: 17  DAEIVSHKLMVRAGMIRRVA---GGIYNYLPVGLRSIRKVEAIVREEMNRAGAIELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    LWQ+SG W+ Y   +   K      +    F + P +      +  + +KSYR++
Sbjct: 74  VQPAELWQESGRWEQYGPELLRFKD-----RKQNEFVIGPTHEEVVTDIARNQIKSYRQM 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKD 417
           PV   +  + +R+E      G+MR R F   DA+ F    +   E   K+++  + I+  
Sbjct: 129 PVNFYQIQTKFRDEIRPRF-GVMRGREFIMKDAYSFDKDHESLKESYKKMYDAYVRIFTR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDA 444
            GFE   V          GS      A
Sbjct: 188 IGFEFRPVAADNGSIGGSGSHEFHVIA 214



 Score = 76.7 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 23/154 (14%), Positives = 57/154 (37%), Gaps = 11/154 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE----NFK 543
           R  + G + Q+         A +++    K  P+++     G I R +G  IE    +  
Sbjct: 409 RGIEVGHVFQLGTKYSDAMGATFIDESG-KAQPMVMGCYGIG-ITRILGAAIEQNFDDKG 466

Query: 544 GNLPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
              P  ++P + ++  +    + +  E A ++   L +  + +  D R E       +  
Sbjct: 467 IVWPEAIAPFEVVLCPMGYDRSDAVREAADKLYADLAAAGIDVILDDRGERPGVMFADWE 526

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
           +  +P  ++ G++   +  I  +         + 
Sbjct: 527 LIGVPHRLVIGERGLKDGKIEYQGRRDAEATLLP 560


>gi|27467857|ref|NP_764494.1| prolyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
 gi|57866745|ref|YP_188412.1| prolyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|251810694|ref|ZP_04825167.1| prolyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
 gi|282876305|ref|ZP_06285172.1| proline--tRNA ligase [Staphylococcus epidermidis SK135]
 gi|293366773|ref|ZP_06613449.1| proline-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|81175026|sp|Q8CST7|SYP_STAES RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|81175027|sp|Q5HPS8|SYP_STAEQ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|27315402|gb|AAO04536.1|AE016747_33 proline-tRNA ligase [Staphylococcus epidermidis ATCC 12228]
 gi|57637403|gb|AAW54191.1| prolyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|251805854|gb|EES58511.1| prolyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
 gi|281295330|gb|EFA87857.1| proline--tRNA ligase [Staphylococcus epidermidis SK135]
 gi|291319074|gb|EFE59444.1| proline-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|329736329|gb|EGG72601.1| proline--tRNA ligase [Staphylococcus epidermidis VCU028]
 gi|329736632|gb|EGG72898.1| proline--tRNA ligase [Staphylococcus epidermidis VCU045]
          Length = 567

 Score =  139 bits (350), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 51/243 (20%), Positives = 98/243 (40%), Gaps = 11/243 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        E+E   HR L +      I +  SG+  +     ++   +   +R +
Sbjct: 4   SKVFIPTMREVPAEAEALSHRLLLKAG---LIKQSTSGIYSYLPLATRVLNNISKIIREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++  D  EI  P +    LW++SG W +Y   +  +K      ++ R FAL P +     
Sbjct: 61  MESIDAVEILMPALQQAELWEESGRWSAYGPELMRLKD-----RNGREFALGPTHEEVVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           ++    LKSY++LP+ L +  S YR+E      GL+R R F   DA+ F + E   +   
Sbjct: 116 SLVRDELKSYKQLPLTLFQIQSKYRDEKRPRF-GLLRGREFLMKDAYSFHSDEASLDATY 174

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
           + ++     I+K  G     V   +       +      +E     ++ + ++     I 
Sbjct: 175 QDMYQAYSRIFKRVGINARPVVADSGAIGGSHTHEFMALSEIGEDTIVYSNESDYAANIE 234

Query: 465 TGV 467
              
Sbjct: 235 KAE 237



 Score = 64.0 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 20/152 (13%), Positives = 54/152 (35%), Gaps = 9/152 (5%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQA-- 555
           +        NA ++++   K  P+++     G       I+ +N   N  +W   +    
Sbjct: 413 LGTKYSESMNATFLDNQG-KAQPLIMGCYGIGVSRTLSAIVEQNNDENGIIWPKSVTPFD 471

Query: 556 ----IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
                +            ++   L      +  D R E    K  +  +  +P+ ++ G 
Sbjct: 472 IHLITINPKKDDQRTLGDQLYQKLMDS-YDVLYDDRKERAGVKFNDSDLIGLPVRVVVGK 530

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           + A E  + +++  +  +++V + +    L +
Sbjct: 531 R-AEEGIVEVKQRINGLSEEVQIDELEYYLQE 561


>gi|255654136|ref|ZP_05399545.1| prolyl-tRNA synthetase [Clostridium difficile QCD-23m63]
 gi|296449825|ref|ZP_06891592.1| proline--tRNA ligase [Clostridium difficile NAP08]
 gi|296877889|ref|ZP_06901909.1| proline--tRNA ligase [Clostridium difficile NAP07]
 gi|296261312|gb|EFH08140.1| proline--tRNA ligase [Clostridium difficile NAP08]
 gi|296431086|gb|EFH16913.1| proline--tRNA ligase [Clostridium difficile NAP07]
          Length = 571

 Score =  139 bits (349), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 48/240 (20%), Positives = 97/240 (40%), Gaps = 11/240 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++E   H+ + R   +  +    SGV      G ++F+ +   +R +
Sbjct: 4   SKMFMPTLKEVPADAEITSHQLMVRSGMIKKM---TSGVYNQLPMGLRVFKKIEQIIREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +   D +EI    +L   LW++SG W +    MF +K      +  R + L P +     
Sbjct: 61  LNKKDCQEILCAALLPSELWKESGRWTAMGEEMFRLKD-----RTEREYCLGPTHEEAFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    + SY++LP+ L +    YR+E      G+MR + FT  DA+ F   ++  ++  
Sbjct: 116 DIIRQEITSYKQLPLNLYQIQVKYRDERRPRF-GVMRTKTFTMKDAYSFDVDDKGLDKSY 174

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
           + + +  +SI+   G E   V+  +       S      +E     V+          + 
Sbjct: 175 QDMFDAYVSIFDRCGLENSPVQADSGAIGGSTSTEFMVKSEVGEDEVVFCSGCDYAANVE 234



 Score = 81.4 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 27/170 (15%), Positives = 64/170 (37%), Gaps = 9/170 (5%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I  +        NA +++    K  P+++     G       I+ ++      
Sbjct: 402 RGVEVGHIFKLGTKYSESMNANFIDRDG-KSKPIVMGCYGIGVERTAAAIIEQHNDEKGI 460

Query: 548 LWL---SPIQAIVTT---ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W    +P   ++          +  A++I N L++  + +  D R+E I  K  +  + 
Sbjct: 461 IWPLSVAPYHVVIVPANMKNEEQISIAEKIYNDLQAMGVEVLLDDRDERIGVKFNDSELI 520

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
            IP+ I  G K  +E  +  +       + + + +    +  E +  + +
Sbjct: 521 GIPMRITVG-KNINEGKVEFKFRHKEDKEIIDIEEINEKVKAEFIRNNVR 569


>gi|329724323|gb|EGG60835.1| proline--tRNA ligase [Staphylococcus epidermidis VCU144]
          Length = 567

 Score =  139 bits (349), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 51/243 (20%), Positives = 98/243 (40%), Gaps = 11/243 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        E+E   HR L +      I +  SG+  +     ++   +   +R +
Sbjct: 4   SKVFIPTMREVPAEAEALSHRLLLKAG---LIKQSTSGIYSYLPLATRVLNNISKIIREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++  D  EI  P +    LW++SG W +Y   +  +K      ++ R FAL P +     
Sbjct: 61  MESIDAVEILMPALQQAELWEESGRWSAYGPELMRLKD-----RNGREFALGPTHEEVVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           ++    LKSY++LP+ L +  S YR+E      GL+R R F   DA+ F + E   +   
Sbjct: 116 SLVRDELKSYKQLPLTLFQIQSKYRDEKRPRF-GLLRGREFLMKDAYSFHSDEASLDATY 174

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
           + ++     I+K  G     V   +       +      +E     ++ + ++     I 
Sbjct: 175 QDMYQAYSRIFKRVGINARPVVADSGAIGGSHTHEFMALSEIGEDTIVYSNESDYAANIE 234

Query: 465 TGV 467
              
Sbjct: 235 KAE 237



 Score = 63.6 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/146 (13%), Positives = 52/146 (35%), Gaps = 9/146 (6%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQA-- 555
           +        NA ++++   K  P+++     G       I+ +N   N  +W   +    
Sbjct: 413 LGTKYSESMNATFLDNQG-KAQPLIMGCYGIGVSRTLSAIVEQNNDENGIIWPKSVTPFD 471

Query: 556 ----IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
                +            ++   L      +  D R E    K  +  +  +P+ ++ G 
Sbjct: 472 IHLITINPKKDDQRTLGDQLYQKLMDS-YDVLYDDRKERAGVKFNDSDLIGLPVRVVVGK 530

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDA 637
           + A E  + +++  +  +++V + + 
Sbjct: 531 R-AEEGIVEVKQRINGLSEEVQIDEL 555


>gi|296129352|ref|YP_003636602.1| prolyl-tRNA synthetase [Cellulomonas flavigena DSM 20109]
 gi|296021167|gb|ADG74403.1| prolyl-tRNA synthetase [Cellulomonas flavigena DSM 20109]
          Length = 597

 Score =  139 bits (349), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 41/212 (19%), Positives = 82/212 (38%), Gaps = 11/212 (5%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
           +        ++E   HR L R   +        G+  W   G ++   +   +R ++   
Sbjct: 10  VRTLREDPADAEVASHRLLVRAGYIR---RAAPGIYTWLPLGLRVLAKVEQVVREEMAAI 66

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
             +E++ P +L +  ++ +G W  Y  N+F +K      +    + L P +      +  
Sbjct: 67  GAQEVHFPALLPKEPYEATGRWTEYGPNIFRLKD-----RKGGDYLLAPTHEEMFTLLVK 121

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
               SY++LP+ L +  + YR+E      GL+R R F   DA+ F   +       +   
Sbjct: 122 DLYSSYKDLPLALYQIQTKYRDEARPR-AGLIRGREFVMKDAYSFDVDDAGLAASYEAQR 180

Query: 410 -LIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
                I+   G E ++V  ++       S+  
Sbjct: 181 AAYQRIFDRLGLEYVIVAATSGAMGGSRSEEF 212



 Score = 54.8 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 61/167 (36%), Gaps = 14/167 (8%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNL 546
           R  + G I Q+            ++ + +     M    +   + R +  + E N     
Sbjct: 430 RGIEIGHIFQLGRKYAQALGLTVLDQNGKAQVVTMGSYGI--GVTRVLAALAEANHDERG 487

Query: 547 PLWL---SPIQAIVTTITSSAV--EYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSI 600
             W    +P    V      A   E A+ +A  L +  + +  D R + +   K  +  +
Sbjct: 488 LAWPADVAPAHVHVLATGKDAAVFEAAEALATTLSARGVEVLYDDRPKVSPGVKFADAEL 547

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL---LDAIPILTKE 644
             +P++++   +  ++  + +R     T+++V +    D +  L  E
Sbjct: 548 LGVPLVVVV-GRGLADGVVEVRPRAGGTSEQVPVATAADRVAELVDE 593


>gi|319441431|ref|ZP_07990587.1| prolyl-tRNA synthetase [Corynebacterium variabile DSM 44702]
          Length = 585

 Score =  139 bits (349), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 40/235 (17%), Positives = 87/235 (37%), Gaps = 11/235 (4%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +  +     GV  W   G ++   + + +RR++     +EI  P 
Sbjct: 19  DAEVPSHKLLVRAGYIRRV---TPGVYSWLPLGLRVLHNIEAIVRREMNAIGAQEIRLPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  +++S  W  Y  ++  +K      +    + L P +      +      SY++ 
Sbjct: 76  LLPREPYERSNRWTEYGDSLLRLKD-----RKGADYLLGPTHEEMFTDLVKGEYSSYKDF 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKD 417
           PV L +  + YR+E      G++R R F   D++ F   +   +E  + H      I+  
Sbjct: 131 PVTLYQIQTKYRDEERPR-AGILRGREFIMKDSYSFTMDDAGLDEAYQAHRVAYQRIFDS 189

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
            G E  +   ++       S+     + +     +          +   +     
Sbjct: 190 LGVEYAICAATSGAMGGSASEEFLAVSASGEDTFVRATDGDYAANVEAVITPAPA 244



 Score = 82.5 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 71/163 (43%), Gaps = 11/163 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE----NFK 543
           R  + G I Q+       F+   ++ + ++  P M    +   + R I ++ E    +  
Sbjct: 422 RGIEIGHIFQLGRKYTEAFDVKILDENGKRSVPTMGSYGL--GVSRLIAVLAEQMHDDKG 479

Query: 544 GNLPLWLSP--IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET-INYKIREHSI 600
              P  ++P  +  ++    ++A E A  +A  L +  L +  D R +     K ++  +
Sbjct: 480 LRWPTTVAPFDVHVVIANKDAAAGEAAGSLAGELDAAGLEVIFDERPKVGPGVKFKDAEL 539

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             +P+++I G +  +E ++ +R   +  T  ++  DA+  + +
Sbjct: 540 LGMPLVVIVG-RGFAEGTVELRNRLTGETTNIAYGDAVATIRE 581


>gi|260905197|ref|ZP_05913519.1| prolyl-tRNA synthetase [Brevibacterium linens BL2]
          Length = 615

 Score =  139 bits (349), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 39/206 (18%), Positives = 86/206 (41%), Gaps = 11/206 (5%)

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVL 300
           E   H+ L R   +        G+  W   G ++   + + +R ++ +   +E++ P +L
Sbjct: 21  EVASHKLLHRAGYIR---RSAPGIYTWLPLGLQVLGKIEAIVREEMARAGSQEVHFPGLL 77

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
               +++SG W+++  ++F +K   D       + L P +      +      SY++LP+
Sbjct: 78  PADPYRKSGRWEAFGPDLFHLKDRKDN-----DYILAPTHEEVFTLLVKDLYSSYKDLPL 132

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDFG 419
            + +  + YR+E      GL+R R F   DA+ F   +   +   + +    +  +   G
Sbjct: 133 SIYQVQTKYRDEARPR-AGLLRGREFIMKDAYSFDIDDAGLDASYEAMRVAYLRAFARLG 191

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAE 445
              + VK +       G++     +E
Sbjct: 192 VPCLPVKATPGAMGGSGTEEFIYPSE 217



 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 59/158 (37%), Gaps = 9/158 (5%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I  +        +   ++ +  K   V +     G       I  E       
Sbjct: 433 RGVEIGQIFKLGRKYAEALDLKVLDQNG-KATTVTMGSYGLGVTRVMACIAEEYHSEGGL 491

Query: 548 LW---LSPIQAIVTT--ITSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIK 601
           LW   L+P    +          E A+++   L+S  +S+  D R + +  +K  +  + 
Sbjct: 492 LWPQHLAPADVHIIAAGKGEEIAEAAEKLTAELESEGVSVLLDDRLKVSPGFKFADAELI 551

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
            IP +I+ G +  ++  + +R   +   Q+V + + + 
Sbjct: 552 GIPTVIVVG-RGLADGVVEVRNRLADEKQEVPVAEVVA 588


>gi|302537254|ref|ZP_07289596.1| prolyl-tRNA synthetase [Streptomyces sp. C]
 gi|302446149|gb|EFL17965.1| prolyl-tRNA synthetase [Streptomyces sp. C]
          Length = 570

 Score =  139 bits (349), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 57/325 (17%), Positives = 114/325 (35%), Gaps = 21/325 (6%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++           ++E   HR L R   +       +GV  W   G K+   +   +R +
Sbjct: 15  SRLMAKTLREDPADAETLSHRLLVRAGYVR---RSSAGVWTWLPLGKKVLDNVSRIVREE 71

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E+  P +L +  ++ SG W  Y   +F +K      +    + L P +     
Sbjct: 72  MDAIGAQEVLLPALLPKEPYEVSGRWSEYGDLLFRLKD-----RKGADYLLGPTHEEIFT 126

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            V      SY++LPV L +  + YR+E      G++R R F   D++ F   ++   E  
Sbjct: 127 LVVKDQCTSYKDLPVMLYQIQTKYRDEARPR-SGVLRGREFQMKDSYSFDVSDEGLAESY 185

Query: 406 KIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA---ENIMKGVLDTIKNSSQD 461
           ++H    + I++  G +  +V   +       S+     A   E+           ++ +
Sbjct: 186 RLHREAYVRIFERLGLDHRIVSAVSGAMGGSASEEFLAPAGAGEDTFADCPSCDYAANTE 245

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
            +   +   EG  +    E    D      +     +     +      V    E     
Sbjct: 246 AVTFALKAVEGDAHPALEEIPTPDT--PTIETLAAHLGVPASATLKNLLVKVDGE----- 298

Query: 522 MIHRAVFGSIERFIGIMIENFKGNL 546
           +    V G  E  +G + E+    +
Sbjct: 299 ITAVGVPGDREVDLGKLGEHLAPAV 323



 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 59/163 (36%), Gaps = 10/163 (6%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG- 544
           + R  + G I Q+       F    +    +     M    +   + R +  + E     
Sbjct: 411 LDRAIEIGHIFQLGRKYADAFGLDVLGKEGKPVRVTMGSYGI--GVSRAVAALAEQTADE 468

Query: 545 ---NLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHS 599
                P  ++P    V     +  +  A+E A  L +    +  D R   +   K+ +  
Sbjct: 469 RGLRWPAAVAPADVHVVAAGKAVPLALAEEAAAALAAAGRRVLLDDRPGLSPGVKLTDAE 528

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +  +P I++ G + A    + ++   + T +++ L +A+  L 
Sbjct: 529 LIGVPWILVAGRRSAE-GVVELQDRAAGTREELPLTEALARLV 570


>gi|183221968|ref|YP_001839964.1| prolyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
 gi|189912036|ref|YP_001963591.1| prolyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|226701304|sp|B0SDM9|SYP_LEPBA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226701305|sp|B0SM58|SYP_LEPBP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|167776712|gb|ABZ95013.1| Prolyl-tRNA ligase [Leptospira biflexa serovar Patoc strain 'Patoc
           1 (Ames)']
 gi|167780390|gb|ABZ98688.1| Prolyl-tRNA synthetase (Proline--tRNA ligase; ProRS) [Leptospira
           biflexa serovar Patoc strain 'Patoc 1 (Paris)']
          Length = 586

 Score =  139 bits (349), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 82/198 (41%), Gaps = 11/198 (5%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQH 303
            H+ + R   +    +  +G+  +   G ++ + +   +R+++      E   P +    
Sbjct: 22  SHKLMMRAGLIR---KSAAGLYSYLPLGLRVLRKIEGIVRKEMDKAGGLEFQLPILTPSE 78

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           +W++SG WD     MF +K   D         L P +      +    ++SY++LP+ + 
Sbjct: 79  IWKESGRWDKMGKEMFRLKDRHDN-----ESCLGPTHEESFCVLVKPMVRSYKDLPINVY 133

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDFGFEK 422
           +  + +R+E      G++R R FT  DA+ F   ++  ++  + +      I+   G   
Sbjct: 134 QIHTKFRDEIRPRF-GVIRSREFTMKDAYSFHLDDESLDKTYQTMRKTYRRIFAGMGLTT 192

Query: 423 IMVKLSTRPEKRVGSDAL 440
           I V+  +       S+  
Sbjct: 193 IPVQADSGNMGGSASEEF 210



 Score = 57.1 bits (136), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 25/144 (17%), Positives = 49/144 (34%), Gaps = 7/144 (4%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN--- 545
           +  + G I       S+     V +   K     +     G + R +  +IE        
Sbjct: 406 KGIEVGHIFKLGQKYSKAFDITVLNDKGKATTTTMGCYGIG-VNRCMATVIEQCNDEKGI 464

Query: 546 -LPLWLSPIQAIVTTITSSAVEYAQE--IANLLKSHHLSIETDFRNETINYKIREHSIKK 602
             P+ ++P    + +I  +  + A+   I   L    + +  D R+    +K ++  +  
Sbjct: 465 FWPVSIAPFTVCLVSIAKNPDDIAKIETIYKSLVESGIEVLWDDRDLGPGFKFKDSELIG 524

Query: 603 IPIIIICGDKEASERSIGIRRFGS 626
            PI I  G     +  I I    S
Sbjct: 525 FPIRITLGKGFLEKNEITILDRKS 548


>gi|283783528|ref|YP_003374282.1| proline--tRNA ligase [Gardnerella vaginalis 409-05]
 gi|283441181|gb|ADB13647.1| proline--tRNA ligase [Gardnerella vaginalis 409-05]
          Length = 610

 Score =  139 bits (349), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 49/290 (16%), Positives = 100/290 (34%), Gaps = 23/290 (7%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
           +I +   GV  W   G K+   + + +R +I     +E++ P +L +  ++ +  W+ Y 
Sbjct: 36  YIRKSAPGVWTWLPLGLKVLNKVQAIIRDEINGIGAQEVHFPALLPREPYEATNRWEEYG 95

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            N+F +K      +    + L P +      +      SY++LPV L +  + YR+E   
Sbjct: 96  DNIFRLKD-----RHQADYLLAPTHEEVFTLLVKDMYSSYKDLPVTLYQIQTKYRDEFRP 150

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              GL+R R F   D + F   E        +       I+   G + ++V   + P   
Sbjct: 151 R-AGLIRGREFIMQDGYSFSIDEDGLKSAYVEERAAYARIFDRLGIKYVIVHAVSGPMGG 209

Query: 435 VGSDAL----------WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP---KFE- 480
             S+            +  A +     ++ +       ++        +   P     E 
Sbjct: 210 SDSEEFLAPMPIGEDTFALAPSGKAWNVEALTTPEMQDVDYSATPAAQSLETPDAKTIEA 269

Query: 481 -YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG 529
              + + +         Q D  L +   A    + +E        R +  
Sbjct: 270 LVKVSNDLHPRKDGREWQADDTLKNLIIAVKHPADAEGGEHEEPWREIVA 319



 Score = 94.1 bits (232), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 63/164 (38%), Gaps = 12/164 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN- 545
           R  + G + Q+            +N + +    V +    +G  + R I  + E    + 
Sbjct: 443 RGVEIGQVFQLGLKYSKALGLSVLNENGKA---VPVWMGCYGIGVSRVIACLAETHHDDA 499

Query: 546 ---LPLWLSPIQAIVTTITSSAVEY--AQEIANLLKSHHLSIETDFRNE-TINYKIREHS 599
               P+ ++P Q  V       V +  A+++   L    + +  D R + +   K ++  
Sbjct: 500 GLAWPMAIAPAQVHVVATGKDQVAFDAAEKVVEELSKQGIEVIFDDRPKVSPGVKFKDAE 559

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  +P+I + G    +  +I IR    +  + V + +A   + +
Sbjct: 560 LVGVPLIAVAGRDTVNNGTIEIRDRNGSNVEAVPVDEAAARIVE 603


>gi|152965404|ref|YP_001361188.1| prolyl-tRNA synthetase [Kineococcus radiotolerans SRS30216]
 gi|189083501|sp|A6W7Y5|SYP_KINRD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|151359921|gb|ABS02924.1| prolyl-tRNA synthetase [Kineococcus radiotolerans SRS30216]
          Length = 586

 Score =  139 bits (349), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 38/203 (18%), Positives = 84/203 (41%), Gaps = 11/203 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E   H+ L R   +        G+  W   G K+ + +   +R ++     +E++ P 
Sbjct: 19  EAEVASHKLLVRAGYVR---RAAPGIYTWLPLGLKVLRKVEQVVREEMDAAGAQEVHFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++ +  W  Y   +F +K      +    + L P +      +      SY++L
Sbjct: 76  LLPREPYEATNRWSDYGDGIFKLKD-----RKGADYLLAPTHEEMFTLLVKDLYSSYKDL 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH-NLIISIYKD 417
           P+ + +  + YR+E      G++R R FT  D++ F   +       ++H    + I++ 
Sbjct: 131 PLSIYQIQTKYRDEARPR-AGIIRGREFTMKDSYSFDVDDAGLERSYELHRQAYVRIFER 189

Query: 418 FGFEKIMVKLSTRPEKRVGSDAL 440
            G + ++V   +       S+  
Sbjct: 190 LGLDFVIVSAVSGAMGGSRSEEF 212



 Score = 79.1 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 25/153 (16%), Positives = 62/153 (40%), Gaps = 12/153 (7%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN----LPLWLSP 552
           +        +   ++ + ++   V++    +G  + R +  + E          P  L+P
Sbjct: 433 LGRRFAQALDLKVLDENGKQ---VVVTMGSYGVGVTRALACVAEGNHDEKGLVWPRALAP 489

Query: 553 IQAIVTTITSSAVEYA--QEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIIC 609
               V         +A  + +A  L +  L +  D R + +   K ++  +  +P I++ 
Sbjct: 490 ADVHVVATGKDPEIFATAERLAGELVAQGLEVLYDDRPKVSPGVKFKDAELIGVPTILVV 549

Query: 610 GDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           G K  +E  + ++   S  +++V+L DA+  + 
Sbjct: 550 G-KGLAEGLVELKDRRSGDSEQVALDDAVSRVA 581


>gi|239618079|ref|YP_002941401.1| prolyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
 gi|259511603|sp|C5CFP9|SYP_KOSOT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|239506910|gb|ACR80397.1| prolyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
          Length = 581

 Score =  139 bits (349), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 45/188 (23%), Positives = 84/188 (44%), Gaps = 11/188 (5%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
            + ++ +GV  +   G ++ + +   +R ++     +EI  P +    LW +SG WD Y 
Sbjct: 31  FVRKNAAGVYTYLPLGLRVLKKVEQIVREEMAAIGCQEILMPIIQPAELWFESGRWDDYG 90

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
             M   K      +  R F L P +     ++  + L+SYR+ P+ L +  + YR+E   
Sbjct: 91  PEMMKFKD-----RHERDFTLGPTHEELLTSIVRNELRSYRQFPLSLFQIANKYRDEIRP 145

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              GL+R R F   DA+ F T  +  ++  K  +     I +  G + ++V+  T     
Sbjct: 146 RF-GLIRAREFLMKDAYSFHTDWESLDKAYKDFYKAYGRIMERIGLKYLVVEADTGA--- 201

Query: 435 VGSDALWD 442
           +G D   +
Sbjct: 202 IGGDESHE 209



 Score = 70.6 bits (171), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 72/186 (38%), Gaps = 17/186 (9%)

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
            PK    +K   G +      ++      + N ++ + + E  HP ++    +G      
Sbjct: 394 CPKCGKPMKMTKGIEL-GHIFKLGTKYSEKMNGYFTDENGEN-HPYIMGCYGWGISRTMS 451

Query: 536 GIMIENFKGNLPLWL---SPIQAIVTTITSSAVEYAQ---EIANLLKSHHLSIETDFRNE 589
            ++ +    +  +W    +P   I+T +  S  + ++   E+  LLK     +  D R  
Sbjct: 452 AVVEQMHDEHGMIWPLSIAPFHIIITMVNPSQEQISKVGEELYELLKEK-YEVLLDDRQA 510

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV-------SLLDAIPILT 642
           +   K ++  +  IP+ I  G K  ++  I ++        +V       S+L+ +  L 
Sbjct: 511 SPGVKFKDADLIGIPLRITVGKK-LTKGLIELKLRTEKQLVEVSISEGYDSVLETVEKLL 569

Query: 643 KESLPP 648
           K+  P 
Sbjct: 570 KKYDPA 575


>gi|167825898|ref|ZP_02457369.1| prolyl-tRNA synthetase [Burkholderia pseudomallei 9]
 gi|226196858|ref|ZP_03792437.1| proline--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
 gi|254299336|ref|ZP_04966786.1| prolyl-tRNA synthetase [Burkholderia pseudomallei 406e]
 gi|157809003|gb|EDO86173.1| prolyl-tRNA synthetase [Burkholderia pseudomallei 406e]
 gi|225931118|gb|EEH27126.1| proline--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
          Length = 578

 Score =  139 bits (349), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 45/207 (21%), Positives = 84/207 (40%), Gaps = 11/207 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ + R   +  +A    G+  +   G +  + + + +R ++      E+  P 
Sbjct: 17  DAEIVSHKLMVRAGMIRRVA---GGIYNYLPVGLRSIRKVEAIVREEMNRAGAIELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    LWQ+SG W+ Y   +   K      +    F + P +      +  + +KSYR++
Sbjct: 74  VQPAELWQESGRWEQYGPELLRFKD-----RKQNEFVIGPTHEEVVTDIARNQIKSYRQM 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKD 417
           PV   +  + +R+E      G+MR R F   DA+ F    +   E   K+++  + I+  
Sbjct: 129 PVNFYQIQTKFRDEIRPRF-GVMRGREFIMKDAYSFDKDHESLKESYKKMYDAYVRIFTR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDA 444
            G E   V          GS      A
Sbjct: 188 IGLEFRPVAADNGSIGGSGSHEFHVIA 214



 Score = 76.7 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 23/154 (14%), Positives = 57/154 (37%), Gaps = 11/154 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE----NFK 543
           R  + G + Q+         A +++    K  P+++     G I R +G  IE    +  
Sbjct: 409 RGIEVGHVFQLGTKYSDAMGATFIDESG-KAQPMVMGCYGIG-ITRILGAAIEQNFDDKG 466

Query: 544 GNLPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
              P  ++P + ++  +    + +  E A ++   L +  + +  D R E       +  
Sbjct: 467 IVWPEAIAPFEVVLCPMGYDRSDAVREAADKLYADLAAAGIDVILDDRGERPGVMFADWE 526

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
           +  +P  ++ G++   +  I  +         + 
Sbjct: 527 LIGVPHRLVIGERGLKDGKIEYQGRRDAEATLLP 560


>gi|167740276|ref|ZP_02413050.1| prolyl-tRNA synthetase [Burkholderia pseudomallei 14]
          Length = 568

 Score =  139 bits (349), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 45/213 (21%), Positives = 84/213 (39%), Gaps = 11/213 (5%)

Query: 234 YLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYE 292
                 ++E   H+ + R   +  +A    G+  +   G +  + + + +R ++      
Sbjct: 1   MKEAPADAEIVSHKLMVRAGMIRRVA---GGIYNYLPVGLRSIRKVEAIVREEMNRAGAI 57

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P V    LWQ+SG W+ Y   +   K      +    F + P +      +  + +
Sbjct: 58  ELLMPAVQPAELWQESGRWEQYGPELLRFKD-----RKQNEFVIGPTHEEVVTDIARNQI 112

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLI 411
           KSYR++PV   +  + +R+E      G+MR R F   DA+ F    +   E   K+++  
Sbjct: 113 KSYRQMPVNFYQIQTKFRDEIRPRF-GVMRGREFIMKDAYSFDKDHESLKESYKKMYDAY 171

Query: 412 ISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
           + I+   G E   V          GS      A
Sbjct: 172 VRIFTRIGLEFRPVAADNGSIGGSGSHEFHVIA 204



 Score = 76.0 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 59/154 (38%), Gaps = 11/154 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNL 546
           R  + G + Q+         A +++    K  P+++     G I R +G  IE NF    
Sbjct: 399 RGIEVGHVFQLGTKYSDAMGATFIDESG-KAQPMVMGCYGIG-ITRILGAAIEQNFDDKG 456

Query: 547 PLW---LSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
            +W   ++P + ++  +    + +  E A ++   L +  + +  D R E       +  
Sbjct: 457 IVWAEAIAPFEVVLCPMGYDRSDAVREAADKLYADLAAAGIDVILDDRGERPGVMFADWE 516

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
           +  +P  ++ G++   +  I  +         + 
Sbjct: 517 LIGVPHRLVIGERGLKDGKIEYQGRRDAEATLLP 550


>gi|323704700|ref|ZP_08116278.1| phosphoribulokinase/uridine kinase [Thermoanaerobacterium
           xylanolyticum LX-11]
 gi|323536162|gb|EGB25935.1| phosphoribulokinase/uridine kinase [Thermoanaerobacterium
           xylanolyticum LX-11]
          Length = 547

 Score =  139 bits (349), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 52/205 (25%), Positives = 91/205 (44%), Gaps = 3/205 (1%)

Query: 12  GSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSL 70
           G++  FP H T  +++E    +   + VA  ++  + DLS  + R+  I+ +       +
Sbjct: 7   GAVCTFPDHVTLEEISEQFKDNHKYRIVAAKVDNLMVDLSTKIDRDCEIQFVDMSTEEGM 66

Query: 71  AVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEII 130
            V R S   ++ +AV+ I P  +V I   +  G Y +       ++  +  I+++M+EII
Sbjct: 67  MVYRRSLTFVLIKAVKDILPTSKVTIEHSLGKGLYCEIHG-STVNNKIVHDIKRRMREII 125

Query: 131 ARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRS 190
             D P +K+YL  E A  LF  +    KV  L     K  + +Y   +  D    P V S
Sbjct: 126 DADYPIIKKYLDKESAVNLFSKEGLEEKVS-LFKYSDKAKIPVYFCEDVVDFFYSPCVPS 184

Query: 191 TGQVKKFFKLMKVAGAYWRGDSNRP 215
           TG +K F  ++   G        + 
Sbjct: 185 TGYLKLFDLILYFPGVILLFPEPKS 209


>gi|308811795|ref|XP_003083205.1| putative prolyl-tRNA synthetase [Oryza sativa (ISS) [Ostreococcus
           tauri]
 gi|116055084|emb|CAL57480.1| putative prolyl-tRNA synthetase [Oryza sativa (ISS) [Ostreococcus
           tauri]
          Length = 553

 Score =  139 bits (349), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 73/410 (17%), Positives = 148/410 (36%), Gaps = 62/410 (15%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           R +    RE  L         ++     G+ I++ +  YM  + K+   +    PQ++  
Sbjct: 85  RWYLDCVRECQLADYGPARGTMVI-RPYGYAIWEGIQKYMDARFKETGVQNAYFPQLIPY 143

Query: 303 HL-WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
               +++ H + +   +  V        +     ++P +      + +  ++SYR+LP+ 
Sbjct: 144 SFITKEASHVEGFSPELALVTKGGGKDLE-EPLVVRPTSETIVNNMMSQWIQSYRDLPML 202

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           L ++ +V+R E        +R   F   +     T      E       +I +Y DF   
Sbjct: 203 LNQWCNVHRWEMR--TRPFIRTLEFLWQEG---HTAHATAEEAEAKAMEMIRVYADFAVT 257

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
           +  + +    + RV S A                                GA      E 
Sbjct: 258 QAAMPVIPGRKSRVESFA--------------------------------GANVTYTIEA 285

Query: 482 ILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           ++ D   +  Q GT   +  N    F+  ++N   E  +   +H++ +G   R +G +I 
Sbjct: 286 MMGD--KKALQAGTSHNLGDNFAKAFDTTFLNDQGETKY---VHQSSWGVSTRLVGGIIM 340

Query: 541 NFKGN----LPLWLSPIQAIVTTI------TSSAVEYAQEIANLLKSHHLSIETD-FRNE 589
               +    LP  L+PIQ +V  I          +     I + L+   +    D  +++
Sbjct: 341 THGDDAGLTLPPKLAPIQVVVVPIWKKDAEKDEVMASVDGIISTLEGAGVRTHLDADQSK 400

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG----STTTQKVSLL 635
           +  +K  ++ +K +PI I  G K+ ++ +  I R            VS+ 
Sbjct: 401 SPGWKFNQYEMKGVPIRIEVGPKDVAKGACVIARRDVPGKEGKEFGVSVE 450


>gi|161525965|ref|YP_001580977.1| prolyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|189349316|ref|YP_001944944.1| prolyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|221202408|ref|ZP_03575440.1| prolyl-tRNA synthetase [Burkholderia multivorans CGD2M]
 gi|221208132|ref|ZP_03581137.1| prolyl-tRNA synthetase [Burkholderia multivorans CGD2]
 gi|221213248|ref|ZP_03586223.1| prolyl-tRNA synthetase [Burkholderia multivorans CGD1]
 gi|226699126|sp|A9AI56|SYP_BURM1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|160343394|gb|ABX16480.1| prolyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|189333338|dbj|BAG42408.1| prolyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|221166700|gb|EED99171.1| prolyl-tRNA synthetase [Burkholderia multivorans CGD1]
 gi|221172035|gb|EEE04477.1| prolyl-tRNA synthetase [Burkholderia multivorans CGD2]
 gi|221177685|gb|EEE10100.1| prolyl-tRNA synthetase [Burkholderia multivorans CGD2M]
          Length = 578

 Score =  139 bits (349), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 55/287 (19%), Positives = 107/287 (37%), Gaps = 13/287 (4%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ + R   +  +A    G+  +   G +  + + + +R ++      E+  P 
Sbjct: 17  DAEIVSHKLMVRAGMIRRVA---GGIYNYLPIGLRSIRKVEAIVREEMNRAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    LWQ+SG W+ Y   +   K   D       F + P +      +  + +KSYR++
Sbjct: 74  VQPAELWQESGRWEQYGPELLRFKDRKDN-----DFVIGPTHEEVVTDIARNQIKSYRQM 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKD 417
           PV   +  + +R+E      G+MR R F   DA+ F    E +     K+++  + I+  
Sbjct: 129 PVNFYQIQTKFRDEIRPRF-GVMRGREFIMKDAYSFDKDAEGLRESYRKMYDAYVRIFTR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
            G E   V   +       S      A+     +     +     +     L   A    
Sbjct: 188 LGLEFRAVAADSGSIGGNFSHEFHVIADTGEDAIAYCPSSEFAANVEAAEALPLIAERAA 247

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLP--SRFNAFYVNSHSEKCHPVM 522
             E + K A     +C  +    N+P      +  + + +E   P +
Sbjct: 248 PAEALTKVATPGKAKCEAVAELLNIPLERTIKSIVLATDNEGAEPTI 294



 Score = 82.5 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 62/164 (37%), Gaps = 11/164 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNL 546
           R  + G + Q+         A +++   +   P+++     G   R +G  IE NF    
Sbjct: 409 RGIEVGHVFQLGTKYSEAMGATFLDESGKPQ-PMLMGCYGIGVT-RILGAAIEQNFDDKG 466

Query: 547 PLWL---SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
            +W    +P + ++  +    + +  E A ++   L +  + +  D R E       +  
Sbjct: 467 IIWPESIAPFEVVLCPMGYDRSDAVREAADKLYAELTAAGIDVILDDRGERPGVMFADWE 526

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  +P  ++ G++   +  I  +    T    +   +A   + +
Sbjct: 527 LIGVPHRLVIGERGLKDGKIEYQGRRDTEATLLPAGEAAATVAE 570


>gi|53720607|ref|YP_109593.1| prolyl-tRNA synthetase [Burkholderia pseudomallei K96243]
 gi|76808687|ref|YP_334889.1| prolyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
 gi|121599492|ref|YP_991789.1| prolyl-tRNA synthetase [Burkholderia mallei SAVP1]
 gi|124386640|ref|YP_001027282.1| prolyl-tRNA synthetase [Burkholderia mallei NCTC 10229]
 gi|126449387|ref|YP_001082781.1| prolyl-tRNA synthetase [Burkholderia mallei NCTC 10247]
 gi|126455301|ref|YP_001067757.1| prolyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|134280246|ref|ZP_01766957.1| prolyl-tRNA synthetase [Burkholderia pseudomallei 305]
 gi|167920563|ref|ZP_02507654.1| prolyl-tRNA synthetase [Burkholderia pseudomallei BCC215]
 gi|217421246|ref|ZP_03452751.1| proline--tRNA ligase [Burkholderia pseudomallei 576]
 gi|242316379|ref|ZP_04815395.1| proline--tRNA ligase [Burkholderia pseudomallei 1106b]
 gi|251766621|ref|ZP_02264460.2| proline--tRNA ligase [Burkholderia mallei PRL-20]
 gi|254178869|ref|ZP_04885523.1| prolyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
 gi|254180577|ref|ZP_04887175.1| prolyl-tRNA synthetase [Burkholderia pseudomallei 1655]
 gi|254190985|ref|ZP_04897491.1| prolyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
 gi|254199071|ref|ZP_04905486.1| prolyl-tRNA synthetase [Burkholderia pseudomallei S13]
 gi|254258028|ref|ZP_04949082.1| proline--tRNA ligase [Burkholderia pseudomallei 1710a]
 gi|81824656|sp|Q63QM5|SYP_BURPS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|114152176|sp|Q3JNG4|SYP_BURP1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|166980105|sp|A3MR95|SYP_BURM7 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|166980106|sp|A2S5R3|SYP_BURM9 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|166980107|sp|A1V0N6|SYP_BURMS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|166980108|sp|A3NZI6|SYP_BURP0 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|52211021|emb|CAH37009.1| prolyl-tRNA synthetase [Burkholderia pseudomallei K96243]
 gi|76578140|gb|ABA47615.1| prolyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
 gi|121228302|gb|ABM50820.1| prolyl-tRNA synthetase [Burkholderia mallei SAVP1]
 gi|124294660|gb|ABN03929.1| proline--tRNA ligase [Burkholderia mallei NCTC 10229]
 gi|126228943|gb|ABN92483.1| prolyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|126242257|gb|ABO05350.1| proline--tRNA ligase [Burkholderia mallei NCTC 10247]
 gi|134248253|gb|EBA48336.1| prolyl-tRNA synthetase [Burkholderia pseudomallei 305]
 gi|157938659|gb|EDO94329.1| prolyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
 gi|160694783|gb|EDP84791.1| prolyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
 gi|169656901|gb|EDS88298.1| prolyl-tRNA synthetase [Burkholderia pseudomallei S13]
 gi|184211116|gb|EDU08159.1| prolyl-tRNA synthetase [Burkholderia pseudomallei 1655]
 gi|217396658|gb|EEC36675.1| proline--tRNA ligase [Burkholderia pseudomallei 576]
 gi|242139618|gb|EES26020.1| proline--tRNA ligase [Burkholderia pseudomallei 1106b]
 gi|243065285|gb|EES47471.1| proline--tRNA ligase [Burkholderia mallei PRL-20]
 gi|254216717|gb|EET06101.1| proline--tRNA ligase [Burkholderia pseudomallei 1710a]
          Length = 578

 Score =  139 bits (349), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 45/207 (21%), Positives = 84/207 (40%), Gaps = 11/207 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ + R   +  +A    G+  +   G +  + + + +R ++      E+  P 
Sbjct: 17  DAEIVSHKLMVRAGMIRRVA---GGIYNYLPVGLRSIRKVEAIVREEMNRAGAIELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    LWQ+SG W+ Y   +   K      +    F + P +      +  + +KSYR++
Sbjct: 74  VQPAELWQESGRWEQYGPELLRFKD-----RKQNEFVIGPTHEEVVTDIARNQIKSYRQM 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKD 417
           PV   +  + +R+E      G+MR R F   DA+ F    +   E   K+++  + I+  
Sbjct: 129 PVNFYQIQTKFRDEIRPRF-GVMRGREFIMKDAYSFDKDHESLKESYKKMYDAYVRIFTR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDA 444
            G E   V          GS      A
Sbjct: 188 IGLEFRPVAADNGSIGGSGSHEFHVIA 214



 Score = 76.7 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 23/154 (14%), Positives = 57/154 (37%), Gaps = 11/154 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE----NFK 543
           R  + G + Q+         A +++    K  P+++     G I R +G  IE    +  
Sbjct: 409 RGIEVGHVFQLGTKYSDAMGATFIDESG-KAQPMVMGCYGIG-ITRILGAAIEQNFDDKG 466

Query: 544 GNLPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
              P  ++P + ++  +    + +  E A ++   L +  + +  D R E       +  
Sbjct: 467 IVWPEAIAPFEVVLCPMGYDRSDAVREAADKLYADLAAAGIDVILDDRGERPGVMFADWE 526

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
           +  +P  ++ G++   +  I  +         + 
Sbjct: 527 LIGVPHRLVIGERGLKDGKIEYQGRRDAEATLLP 560


>gi|332978157|gb|EGK14892.1| proline--tRNA ligase [Psychrobacter sp. 1501(2011)]
          Length = 576

 Score =  139 bits (349), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 51/285 (17%), Positives = 101/285 (35%), Gaps = 18/285 (6%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q           +++    + + R   +  +A   SG+  W   G K+ Q +   +R 
Sbjct: 3   ASQFLFATLKETPSDADIVSSQLMVRAGLIRKLA---SGLYVWLPMGLKVLQKVEKIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++++   +E+  P      LWQ+SG ++ Y   +        T +  R F L P +    
Sbjct: 60  EMQNIGAQEVLMPMTQPAELWQESGRFEDYGPELLRF-----TDRHNRDFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    L+SY++LPV   +    +R+E      G+MR R FT  DA+ F   +      
Sbjct: 115 TDLARGELRSYKQLPVTFFQIQGKFRDEIRPRF-GIMRAREFTMKDAYSFHVDQASLEIT 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             ++++    I++  G     V   T       S      A +    +  +  +     +
Sbjct: 174 YQQMYDAYTRIFQRLGLTFRAVLADTGSIGGSASHEFHVLAGSGEDAIAFSDGSDYAANV 233

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
                +          E        +D     IQ + +L    + 
Sbjct: 234 ELAEAVC-------NDERAAPTQDRQDVATPKIQTNEDLAKFLDI 271



 Score = 83.3 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/173 (19%), Positives = 65/173 (37%), Gaps = 18/173 (10%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NF 542
           +I R  + G I Q+        N   +    +   PV +    +G  + R I   IE N 
Sbjct: 407 SIKRGIEVGHIFQLGDKYSKALNCTVMGEDGK---PVTLMMGCYGIGVSRIIAAAIEQNH 463

Query: 543 KGNLPLW---------LSPIQAIVTTITSS---AVEYAQEIANLLKSHHLSIETDFRNET 590
             N  +W         ++P    +  + S     ++ A+ +   LK+  L++  D RNE 
Sbjct: 464 DDNGIIWAKTPNVNDSIAPFDIAIVPMKSKEETVMQTAEALYQELKAKGLNVLLDDRNER 523

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              K  +  +  IP  I+  D+  +E             Q +S  + +  +++
Sbjct: 524 PGVKFADLELIGIPHRIVVSDRNLAEEKYEYVDRRDGEKQLLSREEVLAKVSQ 576


>gi|291286279|ref|YP_003503095.1| prolyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
 gi|290883439|gb|ADD67139.1| prolyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
          Length = 570

 Score =  139 bits (349), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 49/220 (22%), Positives = 89/220 (40%), Gaps = 11/220 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++E   H+ +AR   +  +A   SG+  +   G  + + +   +R+ 
Sbjct: 4   SKYFIPTLREVPADAEVVSHKLMARAGMIKKVA---SGIYSYLPLGLVVIKKVEDIVRKC 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           + + D  E+  P V    LWQ+SG WD Y   +  +K      +  R F   P +     
Sbjct: 61  MNEADAVELMMPSVQPAELWQESGRWDFYGKELLRIKD-----RHNREFCYGPTHEEVTT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    + SY+ LPV L +  + +R+E      GLMR R F   DA+ F   +   N   
Sbjct: 116 DIIRSYINSYKALPVNLYQIQTKFRDEVRPRF-GLMRGREFIMKDAYSFDMDDAGANISY 174

Query: 406 -KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
            K+++    I++  G    +V   +       S      A
Sbjct: 175 QKMYDAYRRIFEMCGLRYKVVDADSGAIGGSFSHEFMVLA 214



 Score = 87.1 bits (214), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 35/175 (20%), Positives = 69/175 (39%), Gaps = 14/175 (8%)

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           G  +E      +G  ++ GT        S  NA Y++   ++  P ++     G I R +
Sbjct: 395 GGTYEITKGIEVGHIFKLGT-----KYSSSMNAMYLDKDGKRK-PFVMGCYGIG-ITRVV 447

Query: 536 GIMIENFKGN----LPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRN 588
              IE          P+ L+P +  V  +        E A+ I   L +  + +  D R+
Sbjct: 448 AAAIEQNHDEKGIVWPVNLAPFKICVLPLAMKDQEVSETAENIYKDLINKGVEVLLDDRD 507

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           E    K  +  +  IP+ ++ G K  ++  I +    S  + +V +   + +L +
Sbjct: 508 ERPGVKFNDAELIGIPLRVVIGKKTLAQGKIEVTVRASGESYEVDVEGCVDVLLQ 562


>gi|53803705|ref|YP_114445.1| prolyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
 gi|81823621|sp|Q606K3|SYP_METCA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|53757466|gb|AAU91757.1| prolyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
          Length = 583

 Score =  139 bits (349), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 53/250 (21%), Positives = 93/250 (37%), Gaps = 11/250 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L        ++E   H+ + R   +  +A    G+  W   G K+ + +   +R 
Sbjct: 3   TSQFPLNTLKEIPSDAEIVSHQLMLRAGLIRKLAA---GLYTWLPLGLKVLRRVERVVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LWQ+SG W+ Y   +  +    D     R F L P +    
Sbjct: 60  EMDRAGALEVLMPVVQPAELWQESGRWEQYGPELARLHDRHD-----RAFCLGPTHEEII 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
             +  + LKSYR+LPV   +  + +R+E      G+MR R F   DA+ F    E +   
Sbjct: 115 TDLARNELKSYRQLPVNFYQIQTKFRDEIRPRF-GVMRAREFVMKDAYSFHLDQESLAQT 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++    +I+   G     V   T       S      A++    +  +  +     +
Sbjct: 174 YDAMYVAYSNIFSRLGLRFRPVLADTGAIGGSHSHEFHVLADSGEDAIAFSTVSDYAANV 233

Query: 464 NTGVLLGEGA 473
                L   A
Sbjct: 234 EQAEALAPTA 243



 Score = 75.2 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 55/167 (32%), Gaps = 13/167 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN- 545
           R  + G I Q+     +  NA  +N         ++    +G  + R +   IE      
Sbjct: 417 RGIEVGHIFQLGTKYSAALNATVLNEEG---RSQVMLMGCYGIGVSRVVAAAIEQNHDER 473

Query: 546 ---LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
               P  L+P Q  +  I    ++     A+ +   L +    +  D R         + 
Sbjct: 474 GIVWPEALAPFQVALCPINMQTSARVRTTAERLYAELSAAGFEVLYDDRKVRPGVMFADM 533

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
            +  IP  I+  ++     ++  +       Q + +   I  L + S
Sbjct: 534 ELIGIPHRIVISERGLDSGALEYKGRRDADNQSIGIDGVIEFLRERS 580


>gi|297587908|ref|ZP_06946552.1| proline--tRNA ligase [Finegoldia magna ATCC 53516]
 gi|297574597|gb|EFH93317.1| proline--tRNA ligase [Finegoldia magna ATCC 53516]
          Length = 576

 Score =  139 bits (349), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 40/198 (20%), Positives = 87/198 (43%), Gaps = 11/198 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
            +  +       +++E   H+ L R   +   A    G+  +   G++I + + + +R +
Sbjct: 4   NKFYMPTLREDPQDAEIASHKLLLRAGMIRKTAA---GLYSYLPLGYRIVRKVENIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           + +   +EI+ P    + +W++SG W ++   MF ++  ++     R F L P       
Sbjct: 61  MDNYGSQEIHMPVTQPREIWEESGRWKTFGPEMFKLQDRNN-----REFCLGPTAEEYFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    +KSY++LP+ + +  + YR+E      G+ R R F  +D++ F   E+   E  
Sbjct: 116 DLVKGEIKSYKQLPLNIYQIQTKYRDEKRPRF-GINRSREFLMEDSYTFDVDEEAMREAY 174

Query: 406 -KIHNLIISIYKDFGFEK 422
             +      ++   G E 
Sbjct: 175 MNMWRAYEVVFNRLGLEY 192



 Score = 75.6 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 62/164 (37%), Gaps = 9/164 (5%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
             R  + G I Q+        NA +++ + ++    M    + G       I+ +N    
Sbjct: 401 FKRGIEVGNIFQLGQKYSKSMNATFLDENGKEQFFWMGSYGI-GVTRSVSAIVEQNHDDK 459

Query: 546 LPLWL---SPIQAIVTTITSSAVEY---AQEIANLLKSHHLSIETDFRNETINYKIREHS 599
             +W    +P   I+T + +   E    A+++   L    + +  D R E +  K  +  
Sbjct: 460 GMIWPLVVAPYHVIITIVNTKNDEQNTLAEKLYEKLLLQGVEVLLDDRKERVGVKFNDRD 519

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  IP+ I  G K A E  +      +    ++S  +A   + +
Sbjct: 520 LIGIPLRITVGKK-ADEDIVEFSERKTLENVEMSSQEAYEKVME 562


>gi|254973700|ref|ZP_05270172.1| prolyl-tRNA synthetase [Clostridium difficile QCD-66c26]
 gi|255091090|ref|ZP_05320568.1| prolyl-tRNA synthetase [Clostridium difficile CIP 107932]
 gi|255312745|ref|ZP_05354328.1| prolyl-tRNA synthetase [Clostridium difficile QCD-76w55]
 gi|255515506|ref|ZP_05383182.1| prolyl-tRNA synthetase [Clostridium difficile QCD-97b34]
 gi|255648598|ref|ZP_05395500.1| prolyl-tRNA synthetase [Clostridium difficile QCD-37x79]
 gi|260681818|ref|YP_003213103.1| prolyl-tRNA synthetase [Clostridium difficile CD196]
 gi|260685415|ref|YP_003216548.1| prolyl-tRNA synthetase [Clostridium difficile R20291]
 gi|306518722|ref|ZP_07405069.1| prolyl-tRNA synthetase [Clostridium difficile QCD-32g58]
 gi|260207981|emb|CBA60132.1| prolyl-tRNA synthetase [Clostridium difficile CD196]
 gi|260211431|emb|CBE01529.1| prolyl-tRNA synthetase [Clostridium difficile R20291]
          Length = 571

 Score =  139 bits (349), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 48/240 (20%), Positives = 97/240 (40%), Gaps = 11/240 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++E   H+ + R   +  +    SGV      G ++F+ +   +R +
Sbjct: 4   SKMFMPTLKEIPADAEITSHQLMVRSGMIKKM---TSGVYNQLPMGLRVFKKIEQIIREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +   D +EI    +L   LW++SG W +    MF +K      +  R + L P +     
Sbjct: 61  LNKKDCQEILCAALLPSELWKESGRWTAMGEEMFRLKD-----RTEREYCLGPTHEEAFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    + SY++LP+ L +    YR+E      G+MR + FT  DA+ F   ++  ++  
Sbjct: 116 DIIRQEITSYKQLPLNLYQIQVKYRDERRPRF-GVMRTKTFTMKDAYSFDVDDKGLDKSY 174

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
           + + +  +SI+   G E   V+  +       S      +E     V+          + 
Sbjct: 175 QDMFDAYVSIFDRCGLENSPVQADSGAIGGSTSAEFMVKSEVGEDEVVFCSGCDYAANVE 234



 Score = 80.6 bits (197), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 27/170 (15%), Positives = 63/170 (37%), Gaps = 9/170 (5%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I  +        NA +++    K  P+++     G       I+ ++      
Sbjct: 402 RGVEVGHIFKLGTKYSESMNANFIDKDG-KSKPIVMGCYGIGVERTAAAIIEQHNDEKGI 460

Query: 548 LWL---SPIQAIVTT---ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W    +P   ++          +  A+ I N L++  + +  D R+E I  K  +  + 
Sbjct: 461 IWPLSVAPYHVVIVPANMKNEEQISIAENIYNDLQAMGVEVLLDDRDERIGVKFNDSELI 520

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
            IP+ I  G K  +E  +  +       + + + +    +  E +  + +
Sbjct: 521 GIPMRITVG-KNINEGKVEFKLRHKEDKEIIDIEEINEKVKAEFIRNNVR 569


>gi|167817496|ref|ZP_02449176.1| prolyl-tRNA synthetase [Burkholderia pseudomallei 91]
 gi|167847384|ref|ZP_02472892.1| prolyl-tRNA synthetase [Burkholderia pseudomallei B7210]
 gi|167904356|ref|ZP_02491561.1| prolyl-tRNA synthetase [Burkholderia pseudomallei NCTC 13177]
 gi|167912616|ref|ZP_02499707.1| prolyl-tRNA synthetase [Burkholderia pseudomallei 112]
          Length = 568

 Score =  139 bits (349), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 45/213 (21%), Positives = 84/213 (39%), Gaps = 11/213 (5%)

Query: 234 YLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYE 292
                 ++E   H+ + R   +  +A    G+  +   G +  + + + +R ++      
Sbjct: 1   MKEAPADAEIVSHKLMVRAGMIRRVA---GGIYNYLPVGLRSIRKVEAIVREEMNRAGAI 57

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P V    LWQ+SG W+ Y   +   K      +    F + P +      +  + +
Sbjct: 58  ELLMPAVQPAELWQESGRWEQYGPELLRFKD-----RKQNEFVIGPTHEEVVTDIARNQI 112

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLI 411
           KSYR++PV   +  + +R+E      G+MR R F   DA+ F    +   E   K+++  
Sbjct: 113 KSYRQMPVNFYQIQTKFRDEIRPRF-GVMRGREFIMKDAYSFDKDHESLKESYKKMYDAY 171

Query: 412 ISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
           + I+   G E   V          GS      A
Sbjct: 172 VRIFTRIGLEFRPVAADNGSIGGSGSHEFHVIA 204



 Score = 76.7 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 23/154 (14%), Positives = 57/154 (37%), Gaps = 11/154 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE----NFK 543
           R  + G + Q+         A +++    K  P+++     G I R +G  IE    +  
Sbjct: 399 RGIEVGHVFQLGTKYSDAMGATFIDESG-KAQPMVMGCYGIG-ITRILGAAIEQNFDDKG 456

Query: 544 GNLPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
              P  ++P + ++  +    + +  E A ++   L +  + +  D R E       +  
Sbjct: 457 IVWPEAIAPFEVVLCPMGYDRSDAVREAADKLYADLAAAGIDVILDDRGERPGVMFADWE 516

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
           +  +P  ++ G++   +  I  +         + 
Sbjct: 517 LIGVPHRLVIGERGLKDGKIEYQGRRDAEATLLP 550


>gi|307128623|ref|YP_003880653.1| prolyl-tRNA synthetase [Candidatus Sulcia muelleri CARI]
 gi|306483085|gb|ADM89955.1| prolyl-tRNA synthetase [Candidatus Sulcia muelleri CARI]
          Length = 489

 Score =  139 bits (349), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 73/403 (18%), Positives = 151/403 (37%), Gaps = 68/403 (16%)

Query: 261 DGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLW-----------QQS 308
           D  G +     G+ I++ + S +   +K   +E +  P ++ +  +           ++ 
Sbjct: 29  DVRGCMIIKPYGFSIWEKIKSILDNILKYTGHENVYFPLLIPKSYFSKEYNHIKGFAKEC 88

Query: 309 GHWDSYRANMFAVK--CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFG 366
                YR   +  K    D + K      ++P +       +   + SYR+LP+   ++ 
Sbjct: 89  AIISHYRLKNYKNKNIIVDKSSKLEDELIVRPTSETIIWNSYKRWINSYRDLPILFNQWA 148

Query: 367 SVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
           ++ R E        +R   F   + H    TK++  N+  KI N+  ++ ++F    ++ 
Sbjct: 149 NIIRWERR--TRFFLRTSEFLWQEGHTAHSTKKEAINQAKKILNIYTNVLENFIAIPVIQ 206

Query: 426 KLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKD 485
            + T  EK  G++  +                                      E I++D
Sbjct: 207 GIKTYSEKFAGAEKTY------------------------------------CIESIMQD 230

Query: 486 AIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----EN 541
             G+  Q  T        S+  AF V   +EK +   +    +G   R IG +I    ++
Sbjct: 231 --GKSLQIATSHFLGQNFSK--AFDVRYSTEKGNKEYVWATSWGISTRLIGAIIMTHSDD 286

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEY------AQEIANLLKSHHLSIETDFRNE-TINYK 594
               LP  ++PIQ ++  +  +  +          +   L+   ++I+ D R   T  +K
Sbjct: 287 NGLILPPKIAPIQIVIIPVYKTQEQLNLIEKLVFPLKKFLEKRGINIKYDKRIYYTPGWK 346

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
             E+ IK IP+ I  G K+    ++ + R  +   + +S+   
Sbjct: 347 FNEYEIKGIPLRITIGKKDIDRGTVEVVRRDTLEKKYISINKL 389


>gi|242242546|ref|ZP_04796991.1| prolyl-tRNA synthetase [Staphylococcus epidermidis W23144]
 gi|242233973|gb|EES36285.1| prolyl-tRNA synthetase [Staphylococcus epidermidis W23144]
          Length = 567

 Score =  139 bits (349), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 51/243 (20%), Positives = 98/243 (40%), Gaps = 11/243 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        E+E   HR L +      I +  SG+  +     ++   +   +R +
Sbjct: 4   SKVFIPTMREVPAEAEALSHRLLLKAG---LIKQSTSGIYSYLPLATRVLNNISKIIREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++  D  EI  P +    LW++SG W +Y   +  +K      ++ R FAL P +     
Sbjct: 61  MESIDAVEILMPALQQAELWEESGRWSAYGPELMRLKD-----RNGREFALGPTHEEVVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           ++    LKSY++LP+ L +  S YR+E      GL+R R F   DA+ F + E   +   
Sbjct: 116 SLVRDELKSYKQLPLTLFQIQSKYRDEKRPRF-GLLRGREFLMKDAYSFHSDEASLDATY 174

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
           + ++     I+K  G     V   +       +      +E     ++ + ++     I 
Sbjct: 175 QDMYQAYSRIFKRVGINARPVVADSGAIGGSHTHEFMALSEIGEDTIVYSNESDYAANIE 234

Query: 465 TGV 467
              
Sbjct: 235 KAE 237



 Score = 61.7 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 24/152 (15%), Positives = 57/152 (37%), Gaps = 9/152 (5%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL---SPIQ 554
           +        NA ++++   K  P+++     G       I+ +N   N  +W    +P  
Sbjct: 413 LGTKYSESMNATFLDNQG-KAQPLIMGCYGIGVSRTLSAIVEQNNDENGIIWPKSVTPFD 471

Query: 555 AIVTTITSSAVEY---AQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
             + TI     +      ++   L      I  D R E    K  +  +  +P+ ++ G 
Sbjct: 472 IHLITINPKKEDQRTLGDQLYQKLMDS-YDILYDDRKERAGVKFNDSDLIGLPVRVVVGK 530

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           + A E  + +++  +  +++V + +    L  
Sbjct: 531 R-AEEGIVEVKQRFNGLSEEVQIDELETYLQD 561


>gi|313793980|gb|EFS42004.1| prolyl-tRNA synthetase [Propionibacterium acnes HL110PA1]
 gi|313801367|gb|EFS42618.1| prolyl-tRNA synthetase [Propionibacterium acnes HL110PA2]
 gi|313839912|gb|EFS77626.1| prolyl-tRNA synthetase [Propionibacterium acnes HL086PA1]
 gi|314963668|gb|EFT07768.1| prolyl-tRNA synthetase [Propionibacterium acnes HL082PA1]
 gi|315079518|gb|EFT51511.1| prolyl-tRNA synthetase [Propionibacterium acnes HL053PA2]
 gi|327451998|gb|EGE98652.1| prolyl-tRNA synthetase [Propionibacterium acnes HL092PA1]
          Length = 581

 Score =  139 bits (349), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 48/220 (21%), Positives = 92/220 (41%), Gaps = 11/220 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  +        ++E   HR L R   +  +A    GV  W   G ++ + + +  R +
Sbjct: 2   SQLFVRTLREDPADAEVPSHRWLVRAGYIRRVA---PGVYSWLPLGLRVMRRIEAICREE 58

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E++ P +L    ++++G W  Y  N+F +K      +      L P +     
Sbjct: 59  MASIGAQEVSFPALLASDPYKETGRWVEYGDNLFRLKD-----RKGVDMLLGPTHEEMFT 113

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +      SY++LP+ L +  + YR+E      G++R R F   DA+ F   ++  +E  
Sbjct: 114 LMVKDLYSSYKDLPLCLYQIQNKYRDEARPR-AGILRGREFVMMDAYSFDVAQEGLDEAY 172

Query: 406 KIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
           +      I I+   GF+  +VK  + P     S+     A
Sbjct: 173 QAQRDAYIRIFNRLGFDYAIVKAMSGPMGGSRSEEFLAVA 212



 Score = 74.4 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 59/162 (36%), Gaps = 8/162 (4%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I Q+            ++ + +    V +     G       I          
Sbjct: 419 RGIEIGHIFQLGKKYADALGLKVLDHNGKLVT-VTMGSYGLGVSRAVAAIAEGTCDEKGL 477

Query: 548 LWL---SP--IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            W    +P  +Q + T   +  ++ A  IA+ L    L +  D R  +   K  +  I  
Sbjct: 478 CWPREVAPYDVQVLATGKGTEILDEATRIASELAEAGLEVLLDDRKASPGVKFADSEILG 537

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P  ++ G +   +  + +R   +   ++VS+ +A+  + KE
Sbjct: 538 MPTSVVVG-RGLKDGLVEVRDRSTGENRQVSVAEAVCAVLKE 578


>gi|307731045|ref|YP_003908269.1| prolyl-tRNA synthetase [Burkholderia sp. CCGE1003]
 gi|307585580|gb|ADN58978.1| prolyl-tRNA synthetase [Burkholderia sp. CCGE1003]
          Length = 578

 Score =  139 bits (349), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 54/287 (18%), Positives = 103/287 (35%), Gaps = 13/287 (4%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ + R   +  +A    G+  +   G +  + + + +R ++      E+  P 
Sbjct: 17  DAEIVSHKLMVRAGMIRRVA---GGIYNYLPIGLRSIRKVEAIVREEMNRAGAIELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    LWQ+SG W+ Y   +   K    +      F + P +      +    +KSYR+L
Sbjct: 74  VQPAELWQESGRWEKYGPELLRFKDRKQS-----DFVIGPTHEEVVTDIARGQIKSYRQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKD 417
           PV   +  + +R+E      G+MR R F   DA+ F        E   K++   + I+  
Sbjct: 129 PVNFYQIQTKFRDEIRPRF-GVMRGREFIMKDAYSFDKDAAGLRESYRKMYEAYVRIFTR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
            G +   V          GS      A+     +     +     +     L   A    
Sbjct: 188 LGLDFRAVAADNGSIGGSGSHEFHVIADTGEDAIAYCPTSDFAANVEAAEALPLYAERAA 247

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLP--SRFNAFYVNSHSEKCHPVM 522
             E + K       +C  +    N+P      +  + + +E   P +
Sbjct: 248 PTEQLKKTPTPGKAKCEAVAELLNIPLERTIKSIVLATENEGAEPTI 294



 Score = 82.5 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 60/158 (37%), Gaps = 11/158 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNL 546
           R  + G + Q+        NA  ++ + +   P+ +     G I R +G  IE NF    
Sbjct: 409 RGIEVGHVFQLGTKYSEAMNATCLDENGKPQ-PMEMGCYGIG-ITRILGAAIEQNFDEKG 466

Query: 547 PLWL---SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
            +W    +P + ++  +    + +  E A ++   L    + +  D R E       +  
Sbjct: 467 IIWPESIAPFEVVLCPMGYDRSEAVREQADKLYTQLVDAGIDVILDDRGERPGVMFADWE 526

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
           +  +P  ++ GD+   +  +  +         + + +A
Sbjct: 527 LIGVPHRLVIGDRGLKDGKLEYQGRRDAEATLLPVDEA 564


>gi|126440120|ref|YP_001060493.1| prolyl-tRNA synthetase [Burkholderia pseudomallei 668]
 gi|166980109|sp|A3NDS2|SYP_BURP6 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|126219613|gb|ABN83119.1| proline--tRNA ligase [Burkholderia pseudomallei 668]
          Length = 578

 Score =  139 bits (349), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 45/207 (21%), Positives = 84/207 (40%), Gaps = 11/207 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ + R   +  +A    G+  +   G +  + + + +R ++      E+  P 
Sbjct: 17  DAEIVSHKLMVRAGMIRRVA---GGIYNYLPVGLRSIRKVEAIVREEMNRAGAIELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    LWQ+SG W+ Y   +   K      +    F + P +      +  + +KSYR++
Sbjct: 74  VQPAELWQESGRWEQYGPELLRFKD-----RKQNEFVIGPTHEEVVTDIARNQIKSYRQM 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKD 417
           PV   +  + +R+E      G+MR R F   DA+ F    +   E   K+++  + I+  
Sbjct: 129 PVNFYQIQTKFRDEIRPRF-GVMRGREFIMKDAYSFDKDHESLKESYKKMYDAYVRIFTR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDA 444
            G E   V          GS      A
Sbjct: 188 IGLEFRPVAADNGSIGGSGSHEFHVIA 214



 Score = 78.3 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 23/154 (14%), Positives = 57/154 (37%), Gaps = 11/154 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE----NFK 543
           R  + G + Q+         A +++    K  P+++     G I R +G  IE    +  
Sbjct: 409 RGIEVGHVFQLGTKYSDAMGATFIDESG-KAQPMVMGCYGIG-ITRILGAAIEQNFDDKG 466

Query: 544 GNLPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
              P  ++P + ++  +    + +  E A ++   L +  + +  D R E       +  
Sbjct: 467 IVWPEAIAPFEVVLCPMGYDRSDAVREAADKLYAELAAAGIDVILDDRGERPGVMFADWE 526

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
           +  +P  ++ G++   +  I  +         + 
Sbjct: 527 LIGVPHRLVIGERGLKDGKIEYQGRRDAEATLLP 560


>gi|154249367|ref|YP_001410192.1| prolyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
 gi|171769336|sp|A7HKV2|SYP_FERNB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|154153303|gb|ABS60535.1| prolyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
          Length = 574

 Score =  139 bits (349), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 57/266 (21%), Positives = 98/266 (36%), Gaps = 21/266 (7%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q           ++E      L R   +  IA    GV  +   G ++   +   +R 
Sbjct: 3   FSQFYAPTLKEAPADAEVPSQELLTRAGFIRKIAA---GVYTYLPLGRRVLLKIEKIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    EI  P +    LW+QSG W+ Y   M  +K      +  R F L P +    
Sbjct: 60  EMDNIGANEILMPIIQPAELWKQSGRWEDYGPEMMKLKD-----RHGRDFTLGPTHEELV 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+ L +  + YR+E       L R R F   D + F +  +  +E 
Sbjct: 115 TFLVQNELNSYKQLPITLYQMANKYRDEIRPRFGVL-RAREFIMKDGYSFHSDWESLDET 173

Query: 405 LKIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL--DTIKNSSQD 461
            K H     +I +  G +  +V+ S+       S      A+     VL  +     + +
Sbjct: 174 YKAHRKAYSNIMERIGLKYAVVEASSGAIGGNESHEFVAFADTGESNVLFCECGYAGNDE 233

Query: 462 RINT--------GVLLGEGAFYGPKF 479
           R+            L G    Y P  
Sbjct: 234 RVPYTGEIIYDNEELKGMEKVYTPNV 259



 Score = 74.4 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 62/153 (40%), Gaps = 10/153 (6%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPI 553
           +         + Y++   +   P ++    +G   R +G ++E          PL ++P 
Sbjct: 412 LGTKYSEAMGSKYMDKDGQLK-PFIMGCYGWGVS-RTLGAIVEQLHDEKGIIWPLSVAPF 469

Query: 554 QAIVTTIT--SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
             ++T ++   + +++++E+ N L      +  D RN +   K  +  +  IP  +  G 
Sbjct: 470 AVVITPVSNNENLMKFSEELYNFLVEKGEEVLLDDRNISPGMKFNDADLIGIPFRVTVG- 528

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAI-PILTK 643
           K  SE  + I+       +  + L+ I   L K
Sbjct: 529 KALSEGMVEIKWRTGQQFKVKATLEEIYEFLQK 561


>gi|167895971|ref|ZP_02483373.1| prolyl-tRNA synthetase [Burkholderia pseudomallei 7894]
          Length = 568

 Score =  139 bits (349), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 45/213 (21%), Positives = 84/213 (39%), Gaps = 11/213 (5%)

Query: 234 YLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYE 292
                 ++E   H+ + R   +  +A    G+  +   G +  + + + +R ++      
Sbjct: 1   MKEAPADAEIVSHKLMVRAGMIRRVA---GGIYNYLPVGLRSIRKVEAIVREEMNRAGAI 57

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P V    LWQ+SG W+ Y   +   K      +    F + P +      +  + +
Sbjct: 58  ELLMPAVQPAELWQESGRWEQYGPELLRFKD-----RKQNEFVIGPTHEEVVTDIARNQI 112

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLI 411
           KSYR++PV   +  + +R+E      G+MR R F   DA+ F    +   E   K+++  
Sbjct: 113 KSYRQMPVNFYQIQTKFRDEIRPRF-GVMRGREFIMKDAYSFDKDHESLKESYKKMYDAY 171

Query: 412 ISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
           + I+   G E   V          GS      A
Sbjct: 172 VRIFTRIGLEFRPVAADNGSIGGSGSHEFHVIA 204



 Score = 80.2 bits (196), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 24/154 (15%), Positives = 57/154 (37%), Gaps = 11/154 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE----NFK 543
           R  + G + Q+         A +++    K  P+++     G I R +G  IE    +  
Sbjct: 399 RGIEVGHVFQLGTKYSDAMGATFIDESG-KAQPMVMGCYGIG-ITRILGAAIEQNFDDKG 456

Query: 544 GNLPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
              P  ++P + ++  +    + +  E A ++   L +  + +  D R E       +  
Sbjct: 457 IVWPEAIAPFEVVLCPMGYDRSDAVREAADKLYADLAAAGIDVILDDRGERPGVMFADWE 516

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
           +  +P  ++ G++   +  I  R         + 
Sbjct: 517 LIGVPHRLVIGERGLKDGKIEYRGRRDAEATLLP 550


>gi|327334245|gb|EGE75959.1| proline--tRNA ligase [Propionibacterium acnes HL097PA1]
          Length = 581

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 48/220 (21%), Positives = 92/220 (41%), Gaps = 11/220 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  +        ++E   HR L R   +  +A    GV  W   G ++ + + +  R +
Sbjct: 2   SQLFVRTLREDPADAEVPSHRWLVRAGYIRRVA---PGVYSWLPLGLRVMRRIEAICREE 58

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E++ P +L    ++++G W  Y  N+F +K      +      L P +     
Sbjct: 59  MASIGAQEVSFPALLASDPYKETGRWVEYGDNLFRLKD-----RKGVDMLLGPTHEEMFT 113

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +      SY++LP+ L +  + YR+E      G++R R F   DA+ F   ++  +E  
Sbjct: 114 LMVKDLYSSYKDLPLCLYQIQNKYRDEARPR-AGILRGREFVMMDAYSFDVAQEGLDEAY 172

Query: 406 KIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
           +      I I+   GF+  +VK  + P     S+     A
Sbjct: 173 QAQRDAYIRIFNRLGFDYAIVKAMSGPMGGSRSEEFLAVA 212



 Score = 74.4 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 59/162 (36%), Gaps = 8/162 (4%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I Q+            ++ + +    V +     G       I          
Sbjct: 419 RGIEIGHIFQLGKKYADALGLKVLDHNGKLVT-VTMGSYGLGVSRAVAAIAEGTCDEKGL 477

Query: 548 LWL---SP--IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            W    +P  +Q + T   +  ++ A  IA+ L    L +  D R  +   K  +  I  
Sbjct: 478 CWPREVAPYDVQVLATGKGTEILDEATRIASELAEAGLEVLLDDRKASPGVKFADSEILG 537

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P  ++ G +   +  + +R   +   ++VS+ +A+  + KE
Sbjct: 538 MPTSVVVG-RGLKDGLVEVRDRSTGENRQVSVAEAVCAVLKE 578


>gi|289426352|ref|ZP_06428095.1| proline--tRNA ligase [Propionibacterium acnes SK187]
 gi|289153080|gb|EFD01798.1| proline--tRNA ligase [Propionibacterium acnes SK187]
          Length = 585

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 48/220 (21%), Positives = 92/220 (41%), Gaps = 11/220 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  +        ++E   HR L R   +  +A    GV  W   G ++ + + +  R +
Sbjct: 6   SQLFVRTLREDPADAEVPSHRWLVRAGYIRRVA---PGVYSWLPLGLRVMRRIEAICREE 62

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E++ P +L    ++++G W  Y  N+F +K      +      L P +     
Sbjct: 63  MASIGAQEVSFPALLASDPYKETGRWVEYGDNLFRLKD-----RKGVDMLLGPTHEEMFT 117

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +      SY++LP+ L +  + YR+E      G++R R F   DA+ F   ++  +E  
Sbjct: 118 LMVKDLYSSYKDLPLCLYQIQNKYRDEARPR-AGILRGREFVMMDAYSFDVAQEGLDEAY 176

Query: 406 KIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
           +      I I+   GF+  +VK  + P     S+     A
Sbjct: 177 QAQRDAYIRIFNRLGFDYAIVKAMSGPMGGSRSEEFLAVA 216



 Score = 74.4 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 59/162 (36%), Gaps = 8/162 (4%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I Q+            ++ + +    V +     G       I          
Sbjct: 423 RGIEIGHIFQLGKKYADALGLKVLDHNGKLVT-VTMGSYGLGVSRAVAAIAEGTCDEKGL 481

Query: 548 LWL---SP--IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            W    +P  +Q + T   +  ++ A  IA+ L    L +  D R  +   K  +  I  
Sbjct: 482 CWPREVAPYDVQVLATGKGTEILDEATRIASELAEAGLEVLLDDRKASPGVKFADSEILG 541

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P  ++ G +   +  + +R   +   ++VS+ +A+  + KE
Sbjct: 542 MPTSVVVG-RGLKDGLVEVRDRSTGENRQVSVAEAVCAVLKE 582


>gi|126697615|ref|YP_001086512.1| prolyl-tRNA synthetase [Clostridium difficile 630]
 gi|255099207|ref|ZP_05328184.1| prolyl-tRNA synthetase [Clostridium difficile QCD-63q42]
 gi|255304990|ref|ZP_05349162.1| prolyl-tRNA synthetase [Clostridium difficile ATCC 43255]
 gi|123174666|sp|Q18CD2|SYP1_CLOD6 RecName: Full=Prolyl-tRNA synthetase 1; AltName: Full=Proline--tRNA
           ligase 1; Short=ProRS 1
 gi|115249052|emb|CAJ66863.1| Prolyl-tRNA synthetase [Clostridium difficile]
          Length = 571

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 48/240 (20%), Positives = 97/240 (40%), Gaps = 11/240 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++E   H+ + R   +  +    SGV      G ++F+ +   +R +
Sbjct: 4   SKMFMPTLKEIPADAEITSHQLMVRSGMIKKM---TSGVYNQLPMGLRVFKKIEQIIREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +   D +EI    +L   LW++SG W +    MF +K      +  R + L P +     
Sbjct: 61  LNKKDCQEILCAALLPSELWKESGRWTAMGEEMFRLKD-----RTEREYCLGPTHEEAFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    + SY++LP+ L +    YR+E      G+MR + FT  DA+ F   ++  ++  
Sbjct: 116 DIIRQEITSYKQLPLNLYQIQVKYRDERRPRF-GVMRTKTFTMKDAYSFDVDDKGLDKSY 174

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
           + + +  +SI+   G E   V+  +       S      +E     V+          + 
Sbjct: 175 QDMFDAYVSIFDRCGLENSPVQADSGAIGGSTSAEFMVKSEVGEDEVVFCSGCDYAANVE 234



 Score = 80.2 bits (196), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 27/170 (15%), Positives = 63/170 (37%), Gaps = 9/170 (5%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I  +        NA +++    K  P+++     G       I+ ++      
Sbjct: 402 RGVEVGHIFKLGTKYSESMNANFIDKDG-KSKPIVMGCYGIGVERTAAAIIEQHNDEKGI 460

Query: 548 LWL---SPIQAIVTT---ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W    +P   ++          +  A+ I N L++  + +  D R+E I  K  +  + 
Sbjct: 461 IWPLSVAPYHVVIVPANMKNEEQISIAENIYNDLQAMGVEVLLDDRDERIGVKFNDSELI 520

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
            IP+ I  G K  +E  +  +       + + + +    +  E +  + +
Sbjct: 521 GIPMRITVG-KNINEGKVEFKLRHKEDKEIIDIEEINEKVKAEFIRNNVR 569


>gi|30249296|ref|NP_841366.1| prolyl-tRNA synthetase [Nitrosomonas europaea ATCC 19718]
 gi|81838727|sp|Q82UZ8|SYP_NITEU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|30180615|emb|CAD85228.1| Prolyl-tRNA synthetase [Nitrosomonas europaea ATCC 19718]
          Length = 568

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 50/235 (21%), Positives = 89/235 (37%), Gaps = 11/235 (4%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E   HR + R   +  +   GSG+  W   G +I   +   +R ++ +    E+  P 
Sbjct: 17  EAELISHRLMLRAGLIKRL---GSGLYTWMPLGLRILHKIEHIIREEMNNSGALELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    LWQ++G WD +   M  ++      +    F   P +    V +    +KSYR+L
Sbjct: 74  VHPAELWQETGRWDVFGPQMLKIQD-----RHKHDFCFGPTHEEVIVDIARREIKSYRQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKD 417
           P+   +  + +R+E      G+MR R F   DA+ F        +  ++       I+  
Sbjct: 129 PINFYQIQTKFRDEIRPRF-GVMRAREFIMKDAYSFHADVDSLEQTYRLMQETYSRIFTR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
            G +   V   T      GS      A++    +     +     I     +  G
Sbjct: 188 IGLKFRAVAADTGAIGGSGSHEFHVLADSGEDAIAFCPASDYAANIELAEAVPHG 242



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 63/165 (38%), Gaps = 13/165 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN- 545
           R  + G + Q+      +  A Y++   +     ++    +G  + R +   IE      
Sbjct: 403 RGIEVGHVFQLRTKYSEKMKATYLDESGQTR---IMEMGCYGIGVSRIVAAAIEQNYDER 459

Query: 546 ---LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
               P  ++P Q  +  +    +      A+++    +S  + +  D R E       + 
Sbjct: 460 GIIFPQTIAPFQLSIIPVGYHKSQQVRTEAEKLYQACRSAGIEVLLDDREERPGVMFADQ 519

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +  IP  I+ G++   E  +  +     T Q +SL +A  I++K
Sbjct: 520 ELIGIPHRIVIGERNLREGMVEYQGRLDKTPQMLSLSEAASIISK 564


>gi|327270906|ref|XP_003220229.1| PREDICTED: probable prolyl-tRNA synthetase, mitochondrial-like
           [Anolis carolinensis]
          Length = 472

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 68/446 (15%), Positives = 142/446 (31%), Gaps = 75/446 (16%)

Query: 206 AYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGV 265
            ++     +      +  + N ++E                ++L     L  I     G 
Sbjct: 27  RFYCNLQTKRKHVSQHFQSMNLREESMGSKEGKSVEMTCKSQRLMLLGGL--ICPASPGC 84

Query: 266 IFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCA 324
             +     +  + LI  + ++++    +++N P +    LW+ SG W+     +  +K  
Sbjct: 85  YHYMPYAVRAMEKLIKVIDQEMQAIGGQKMNMPTLCSAKLWRDSGRWELMGKELLRMKD- 143

Query: 325 DDTIKDLRTFALKPMNCPGHVAVFNHG-LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRV 383
               +  + + L P +      +       SY++LP+ L +    +R+EP     GL+R 
Sbjct: 144 ----RHGQEYCLGPTHEEAITDLIASQGCLSYKQLPLLLYQVTRKFRDEPKPRF-GLLRG 198

Query: 384 RGFTQDDAHVFCTKEQMFNECLKIHNLII------------SIYKDFGFEKIMVKLSTRP 431
           R F   D + F   ++   +  +  +                +    G     +    + 
Sbjct: 199 REFYMKDMYTFDASKEAALQTYECVSNAYSNIFNNLGLQFIKVQAATGSIGGTMSHEFQL 258

Query: 432 EKRVGSDALWDDAENIMKGVLDTIKNSS-------QDRIN-TGVLLGEGAFYGPKFEYIL 483
              VG D L   A       ++T+ ++           I   G+ +G   F G K+    
Sbjct: 259 PAEVGEDQLMMCANCDFSANVETMNSNEMGCPVCKGKLIESKGIEVGHTFFLGTKYS--- 315

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG-SIERFIGIMIE-- 540
                                  + F    H+ +  PV      +G  + R +   IE  
Sbjct: 316 -----------------------SVFNATVHTAQNKPVSAEMGCYGLGVSRILAASIEVL 352

Query: 541 --NFKGNLPLWLSPIQAIVTT------------ITSSAVEYAQEIANLLKSHHLSIETDF 586
                   P  ++P Q  +              +     ++  E    LK+    +  D 
Sbjct: 353 STEDAIRWPDLIAPYQVCLIPPKKGSNEEKGAILLEELYDFISETVPRLKNE--MVLDDR 410

Query: 587 RNETINYKIREHSIKKIPIIIICGDK 612
              TI  ++++ +    P +II G K
Sbjct: 411 TRLTIGKRLKDANKLGYPYVIIGGKK 436


>gi|303234780|ref|ZP_07321406.1| proline--tRNA ligase [Finegoldia magna BVS033A4]
 gi|302494121|gb|EFL53901.1| proline--tRNA ligase [Finegoldia magna BVS033A4]
          Length = 576

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 86/198 (43%), Gaps = 11/198 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
            +  +       +++E   H+ L R   +   A    G+  +   G++I + + + +R +
Sbjct: 4   NKFYMPTLREDPQDAEIASHKLLLRAGMIRKTAA---GLYSYLPLGYRIVRKVENIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           + +   +EI+ P    + +W++SG W ++   MF +K  ++     R F L P       
Sbjct: 61  MDNYGSQEIHMPVTQPREIWEESGRWKTFGPEMFKLKDRNN-----REFCLGPTAEEYFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    +KSY++LP+ + +  + YR+E      G+ R R F   DA+ F   E+   E  
Sbjct: 116 DLVKGEIKSYKQLPLNIYQIQTKYRDEKRPRF-GINRSREFLMQDAYTFDVNEEAMGEAY 174

Query: 406 -KIHNLIISIYKDFGFEK 422
             +      ++   G E 
Sbjct: 175 MNMWRAYEVVFNRLGLEY 192



 Score = 75.6 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 61/164 (37%), Gaps = 9/164 (5%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
             R  + G I Q+        NA +++ + ++    M    + G       I+ +N    
Sbjct: 401 FKRGIEVGNIFQLGQKYSKSMNATFLDENGKEQFFWMGSYGI-GVTRSVSAIVEQNHDDK 459

Query: 546 LPLWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
             +W    +P   I+T +          A+++   L    + +  D R E +  K  +  
Sbjct: 460 GMIWPLVVAPYHVIITIVNTKDEEQNTLAEKLYEKLLLQGVEVLLDDRKERVGVKFNDRD 519

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  IP+ I  G K A+E  +      +    ++S  +A   + +
Sbjct: 520 LIGIPLRITVGKK-AAEDIVEFSERRTLENVEMSSTEAYEKVME 562


>gi|84498663|ref|ZP_00997420.1| prolyl-tRNA synthetase [Janibacter sp. HTCC2649]
 gi|84381060|gb|EAP96946.1| prolyl-tRNA synthetase [Janibacter sp. HTCC2649]
          Length = 593

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 42/203 (20%), Positives = 83/203 (40%), Gaps = 11/203 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   HR L R   +        G+  W   G ++ + + + +R ++     +E+  P 
Sbjct: 17  DAELPGHRLLVRAGYVR---RAAPGIYTWLPLGLRVLRKVEAIVREEMDAIGAQELTFPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++ +  W  Y  N+F +K      +    + L P +             SY++L
Sbjct: 74  LLPREPYEATNRWTEYGDNIFRLKD-----RKGGDYLLGPTHEEMFTLAVKDMFSSYKDL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKD 417
           P+ L +  + YR+E      GL+R R F   D++ F   ++      + H    I I+  
Sbjct: 129 PLSLYQIQNKYRDEARPR-AGLLRGREFVMKDSYSFDVSDEGLEASYQAHRAAYIKIFDR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDAL 440
            GFE ++V   +       S+  
Sbjct: 188 LGFEYVIVSAMSGAMGGSASEEF 210



 Score = 76.0 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 58/167 (34%), Gaps = 13/167 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I Q+        +   ++ + +    V +     G       I  +N      
Sbjct: 423 RGIEMGHIFQLGRKFAEALDLKVLDENGKLVT-VTMGSYGVGVSRAVAAIAEDNLDDLGL 481

Query: 548 LWL---SPIQAIVTTITS------SAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIRE 597
           +W    +P    V                A EI   L++  +S+  D R + +   K ++
Sbjct: 482 IWPRAVTPADVHVVATGKNRDRDGDVFAKADEITASLEAQGISVLYDDREKVSPGVKFKD 541

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
             +  IP I++ G K      I I+   S   ++V++   I  +  E
Sbjct: 542 SELIGIPTIVVVG-KSLENGVIEIKDRRSGERREVAVDSVIDEVLAE 587


>gi|326382934|ref|ZP_08204624.1| prolyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
 gi|326198524|gb|EGD55708.1| prolyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
          Length = 576

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 45/235 (19%), Positives = 89/235 (37%), Gaps = 11/235 (4%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +        G+  W   G K+F+ + + +R ++     +EI  P 
Sbjct: 15  DAEVPSHKLLVRAGYIR---RAAPGIYEWLPLGLKVFRAVENLVREEMDAMGAQEILLPA 71

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++ +G W  Y   +F VK      +      L P +      +      SY++L
Sbjct: 72  LLPRDPYETTGRWTEYGPALFRVKD-----RKGADMMLGPTHEEIFTQLVKGEYSSYKDL 126

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKD 417
           PV L +  + YR+E      GL+R R F   D++ F   +         H      I+  
Sbjct: 127 PVTLYQIQTKYRDEERPR-AGLLRGREFVMKDSYSFDIDDAGLQASYDAHRAAYQRIFDR 185

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
            G + ++V  ++       S+    + E      + + ++     +   V     
Sbjct: 186 LGVKYVIVAATSGAMGGSASEEFLAECEVGEDTFVRSTESGYAANVEAVVTPAPA 240



 Score = 81.4 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 28/164 (17%), Positives = 66/164 (40%), Gaps = 10/164 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN----FK 543
           +  + G I Q+       F    +  + +   P M    +   + R + ++ E       
Sbjct: 414 KGIEIGHIFQLGRKYTDAFAFDVLGENGKPVRPTMGSYGL--GVSRMVAVLAEQLHDEKG 471

Query: 544 GNLPLWLSP--IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
              P  ++P  +  ++     +AV  AQ +A  L +  +S+  D R  +   K ++  + 
Sbjct: 472 LRWPREVAPFDVHLVIANKDEAAVAGAQRLAADLDAAGVSVLFDDRKASPGVKFKDAELL 531

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
            +P++++ G +  ++ +I IR   S  T    +  A+  +   +
Sbjct: 532 GMPVVVVVG-RGWADGTIEIRDRLSGETTAAPVDGAVDAVIAAA 574


>gi|255011540|ref|ZP_05283666.1| uridine kinase [Bacteroides fragilis 3_1_12]
 gi|313149366|ref|ZP_07811559.1| uridine kinase [Bacteroides fragilis 3_1_12]
 gi|313138133|gb|EFR55493.1| uridine kinase [Bacteroides fragilis 3_1_12]
          Length = 557

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 42/241 (17%), Positives = 96/241 (39%), Gaps = 3/241 (1%)

Query: 1   MPSDIKLTFPDGSI-KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-S 58
           M   +++   + +I K FP+ ++  D+    + +   + V+  +N +   L+  V     
Sbjct: 1   MKQMLQIYCKNNNISKEFPIGSSLLDIYYGFNLNFPYQVVSAKVNNRSEGLNFRVYNNKD 60

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           +E +   D   +     S   ++ +AV  ++P  ++ +   +  G++ +    +  + ++
Sbjct: 61  VEFLDVRDSSGMRTYVRSLCFVLYKAVSELFPNGKLFVEHPVSKGYFCNLRIGRAITLED 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           ++QI+K+MQEII  +  + +      +A  +F  +    KV++LES         Y  G 
Sbjct: 121 VSQIKKRMQEIITENITYHRIECHTTEAVRVFSERGMNDKVKLLES-SGSIYTYYYTLGG 179

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             D   G  + STG +  F  +    G   R  +                 ++ +     
Sbjct: 180 TADYYYGNLLPSTGFIHLFDLVKYYDGLLLRIPNKENPTVLEEVVKQEKMLDVFKEHLRW 239

Query: 239 E 239
            
Sbjct: 240 N 240


>gi|327446413|gb|EGE93067.1| prolyl-tRNA synthetase [Propionibacterium acnes HL013PA2]
          Length = 581

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 48/220 (21%), Positives = 92/220 (41%), Gaps = 11/220 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  +        ++E   HR L R   +  +A    GV  W   G ++ + + +  R +
Sbjct: 2   SQLFVRTLREDPADAEVPSHRWLVRAGYIRRVA---PGVYSWLPLGLRVMRRIEAICREE 58

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E++ P +L    ++++G W  Y  N+F +K      +      L P +     
Sbjct: 59  MASIGAQEVSFPALLASDPYKETGRWVEYGDNLFRLKD-----RKGVDMLLGPTHEEMFT 113

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +      SY++LP+ L +  + YR+E      G++R R F   DA+ F   ++  +E  
Sbjct: 114 LMVKDLYSSYKDLPLCLYQIQNKYRDEARPR-AGILRGREFVMMDAYSFDVAQEGLDEAY 172

Query: 406 KIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
           +      I I+   GF+  +VK  + P     S+     A
Sbjct: 173 QAQRDAYIRIFNRLGFDYAIVKAMSGPMGGSRSEEFLAVA 212



 Score = 74.4 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 59/162 (36%), Gaps = 8/162 (4%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I Q+            ++ + +    V +     G       I          
Sbjct: 419 RGIEIGHIFQLGKKYADALGLKVLDHNGKLVT-VTMGSYGLGVSRAVAAIAEGTCDEKGL 477

Query: 548 LWL---SP--IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            W    +P  +Q + T   +  ++ A  IA+ L    L +  D R  +   K  +  I  
Sbjct: 478 CWPREVAPYDVQVLATGKGTEILDEATRIASELAEAGLEVLLDDRKASPGVKFADSEILG 537

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P  ++ G +   +  + +R   +   ++VS+ +A+  + KE
Sbjct: 538 MPTSVVVG-RGLKDGLVEVRDRSTGENRQVSVAEAVCAVLKE 578


>gi|313813363|gb|EFS51077.1| prolyl-tRNA synthetase [Propionibacterium acnes HL025PA1]
          Length = 581

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 48/220 (21%), Positives = 92/220 (41%), Gaps = 11/220 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  +        ++E   HR L R   +  +A    GV  W   G ++ + + +  R +
Sbjct: 2   SQLFVRTLREDPADAEVPSHRWLVRAGYIRRVA---PGVYSWLPLGLRVMRRIEAICREE 58

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E++ P +L    ++++G W  Y  N+F +K      +      L P +     
Sbjct: 59  MASIGAQEVSFPALLASDPYKETGRWVEYGDNLFRLKD-----RKGVDMLLGPTHEEMFT 113

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +      SY++LP+ L +  + YR+E      G++R R F   DA+ F   ++  +E  
Sbjct: 114 LMVKDLYSSYKDLPLCLYQIQNKYRDEARPR-AGILRGREFVMMDAYSFDVAQEGLDEAY 172

Query: 406 KIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
           +      I I+   GF+  +VK  + P     S+     A
Sbjct: 173 QAQRDAYIRIFNRLGFDYAIVKAMSGPMGGSRSEEFLAVA 212



 Score = 74.4 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 59/162 (36%), Gaps = 8/162 (4%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I Q+            ++ + +    V +     G       I          
Sbjct: 419 RGIEIGHIFQLGKKYADALGLKVLDHNGKLVT-VTMGSYGLGVSRAVAAIAEGTCDEKGL 477

Query: 548 LWL---SP--IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            W    +P  +Q + T   +  ++ A  IA+ L    L +  D R  +   K  +  I  
Sbjct: 478 CWPREVAPYDVQVLATGKGTEILDEATRIASELAEAGLEVLLDDRKASPGVKFADSEILG 537

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P  ++ G +   +  + +R   +   ++VS+ +A+  + KE
Sbjct: 538 MPTSVVVG-RGLKDGLVEVRDRSTGENRQVSVAEAVCAVLKE 578


>gi|307267271|ref|ZP_07548772.1| phosphoribulokinase/uridine kinase [Thermoanaerobacter wiegelii
           Rt8.B1]
 gi|306917699|gb|EFN47972.1| phosphoribulokinase/uridine kinase [Thermoanaerobacter wiegelii
           Rt8.B1]
          Length = 547

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 47/236 (19%), Positives = 91/236 (38%), Gaps = 3/236 (1%)

Query: 12  GSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSL 70
           G+I  +P      ++A+          VA  ++ ++ DL+  V ++ ++E +        
Sbjct: 7   GNIYKYPGGTKLENIAKKFEHLYNGIIVAAKVDNELVDLNCTVSKDSTVEFVDTTIEEGT 66

Query: 71  AVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEII 130
            + R S   +  +AV+ + P   V I   +  G Y +       ++  ++ I+K+M+EII
Sbjct: 67  RIYRRSLTFVFIKAVKELLPGATVTIEHSLGKGLYCEIHG-YSLNNKIVSMIKKRMEEII 125

Query: 131 ARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRS 190
            +D    ++ L  E+A +LFE +    KV++ +    K+ V +Y      D    P V S
Sbjct: 126 EKDLKIERKMLPKEEAIKLFEKEGLTEKVKLFKD-TDKDKVPVYYCDGTVDFFYSPCVPS 184

Query: 191 TGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDH 246
           TG +K F       G            S            + +            +
Sbjct: 185 TGYLKVFDIRFYFPGIILIAPDVYNPRSLPAFVDVPKLASIFKETEEWASILNISY 240


>gi|319779147|ref|YP_004130060.1| Prolyl-tRNA synthetase [Taylorella equigenitalis MCE9]
 gi|317109171|gb|ADU91917.1| Prolyl-tRNA synthetase [Taylorella equigenitalis MCE9]
          Length = 582

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 44/222 (19%), Positives = 91/222 (40%), Gaps = 11/222 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  +        E+E   H+ + R   +  +   G+G+  +   G+K+ + + + +R 
Sbjct: 3   ASKYHINTLKEAPAEAEVVSHKYMLRAGMIRKL---GAGIYTYMPLGFKVLKKVEAIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LW ++  W++Y   +   K      +  R F ++P +    
Sbjct: 60  EMNRAGAIELLMPIVQPAELWMKTERWNAYGPELLRFKD-----RHSRDFIIQPTSEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + + S+R+LP+      + +R+E      GLMR R F   DA+ F   E+  N  
Sbjct: 115 TDIVANEVHSWRQLPLNFYHIQTKFRDERRPRF-GLMRGREFLMKDAYSFDRTEEEANIS 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
             K+++  + I+   G +   V   T       S      A+
Sbjct: 174 YQKMYDAYVRIFTRLGLKFRAVNADTGSIGGSRSHEFQVIAQ 215



 Score = 79.1 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/167 (19%), Positives = 69/167 (41%), Gaps = 13/167 (7%)

Query: 486 AIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NF 542
           AI R  + G +  +     S+  A Y++ + ++    +I    +G  + R +   IE N 
Sbjct: 409 AIDRGIEVGHVFFLGDKYSSKLRAVYLDENGKEA---VIQMGCYGIGVSRIVAAAIEQNH 465

Query: 543 KGNLPLW---LSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
             N  +W   ++P + ++  I    +      + E+   LK+    +  D R+       
Sbjct: 466 DENGIIWPLPMAPYEIVICPIGWSKSEEVKNKSLELYEQLKAEGYDVILDDRDLRTGVMF 525

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            E  +  +PI I  GD+   +  I +++      +K+SL + I  + 
Sbjct: 526 TEWELIGVPIRITVGDRGLKDGVIEVQKRTEKEAKKLSLNEVINYVK 572


>gi|313763586|gb|EFS34950.1| prolyl-tRNA synthetase [Propionibacterium acnes HL013PA1]
 gi|313807954|gb|EFS46435.1| prolyl-tRNA synthetase [Propionibacterium acnes HL087PA2]
 gi|313822153|gb|EFS59867.1| prolyl-tRNA synthetase [Propionibacterium acnes HL036PA1]
 gi|313823613|gb|EFS61327.1| prolyl-tRNA synthetase [Propionibacterium acnes HL036PA2]
 gi|313825936|gb|EFS63650.1| prolyl-tRNA synthetase [Propionibacterium acnes HL063PA1]
 gi|314914740|gb|EFS78571.1| prolyl-tRNA synthetase [Propionibacterium acnes HL005PA4]
 gi|314919298|gb|EFS83129.1| prolyl-tRNA synthetase [Propionibacterium acnes HL050PA1]
 gi|314920792|gb|EFS84623.1| prolyl-tRNA synthetase [Propionibacterium acnes HL050PA3]
 gi|314924644|gb|EFS88475.1| prolyl-tRNA synthetase [Propionibacterium acnes HL036PA3]
 gi|314930471|gb|EFS94302.1| prolyl-tRNA synthetase [Propionibacterium acnes HL067PA1]
 gi|314954371|gb|EFS98777.1| prolyl-tRNA synthetase [Propionibacterium acnes HL027PA1]
 gi|314957443|gb|EFT01546.1| prolyl-tRNA synthetase [Propionibacterium acnes HL002PA1]
 gi|314962089|gb|EFT06190.1| prolyl-tRNA synthetase [Propionibacterium acnes HL002PA2]
 gi|314968504|gb|EFT12602.1| prolyl-tRNA synthetase [Propionibacterium acnes HL037PA1]
 gi|314978817|gb|EFT22911.1| prolyl-tRNA synthetase [Propionibacterium acnes HL072PA2]
 gi|314986526|gb|EFT30618.1| prolyl-tRNA synthetase [Propionibacterium acnes HL005PA2]
 gi|314990885|gb|EFT34976.1| prolyl-tRNA synthetase [Propionibacterium acnes HL005PA3]
 gi|315081252|gb|EFT53228.1| prolyl-tRNA synthetase [Propionibacterium acnes HL078PA1]
 gi|315083450|gb|EFT55426.1| prolyl-tRNA synthetase [Propionibacterium acnes HL027PA2]
 gi|315087136|gb|EFT59112.1| prolyl-tRNA synthetase [Propionibacterium acnes HL002PA3]
 gi|315089308|gb|EFT61284.1| prolyl-tRNA synthetase [Propionibacterium acnes HL072PA1]
 gi|315099214|gb|EFT71190.1| prolyl-tRNA synthetase [Propionibacterium acnes HL059PA2]
 gi|315100435|gb|EFT72411.1| prolyl-tRNA synthetase [Propionibacterium acnes HL046PA1]
 gi|315106771|gb|EFT78747.1| prolyl-tRNA synthetase [Propionibacterium acnes HL030PA1]
 gi|315109012|gb|EFT80988.1| prolyl-tRNA synthetase [Propionibacterium acnes HL030PA2]
 gi|327329728|gb|EGE71484.1| proline--tRNA ligase [Propionibacterium acnes HL096PA3]
 gi|327454965|gb|EGF01620.1| prolyl-tRNA synthetase [Propionibacterium acnes HL087PA3]
 gi|327457749|gb|EGF04404.1| prolyl-tRNA synthetase [Propionibacterium acnes HL083PA2]
 gi|328752168|gb|EGF65784.1| prolyl-tRNA synthetase [Propionibacterium acnes HL020PA1]
 gi|328755200|gb|EGF68816.1| prolyl-tRNA synthetase [Propionibacterium acnes HL087PA1]
 gi|328758320|gb|EGF71936.1| prolyl-tRNA synthetase [Propionibacterium acnes HL025PA2]
          Length = 581

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 48/220 (21%), Positives = 92/220 (41%), Gaps = 11/220 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  +        ++E   HR L R   +  +A    GV  W   G ++ + + +  R +
Sbjct: 2   SQLFVRTLREDPADAEVPSHRWLVRAGYIRRVA---PGVYSWLPLGLRVMRRIEAICREE 58

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E++ P +L    ++++G W  Y  N+F +K      +      L P +     
Sbjct: 59  MASIGAQEVSFPALLASDPYKETGRWVEYGDNLFRLKD-----RKGVDMLLGPTHEEMFT 113

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +      SY++LP+ L +  + YR+E      G++R R F   DA+ F   ++  +E  
Sbjct: 114 LMVKDLYSSYKDLPLCLYQIQNKYRDEARPR-AGILRGREFVMMDAYSFDVAQEGLDEAY 172

Query: 406 KIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
           +      I I+   GF+  +VK  + P     S+     A
Sbjct: 173 QAQRDAYIRIFNRLGFDYAIVKAMSGPMGGSRSEEFLAVA 212



 Score = 74.4 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 59/162 (36%), Gaps = 8/162 (4%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I Q+            ++ + +    V +     G       I          
Sbjct: 419 RGIEIGHIFQLGKKYADALGLKVLDHNGKLVT-VTMGSYGLGVSRAVAAIAEGTCDEKGL 477

Query: 548 LWL---SP--IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            W    +P  +Q + T   +  ++ A  IA+ L    L +  D R  +   K  +  I  
Sbjct: 478 CWPREVAPYDVQVLATGKGTEILDEATRIASELAEAGLEVLLDDRKASPGVKFADSEILG 537

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P  ++ G +   +  + +R   +   ++VS+ +A+  + KE
Sbjct: 538 MPTSVVVG-RGLKDGLVEVRDRSTGENRQVSVAEAVCAVLKE 578


>gi|313836817|gb|EFS74531.1| prolyl-tRNA synthetase [Propionibacterium acnes HL037PA2]
 gi|314929774|gb|EFS93605.1| prolyl-tRNA synthetase [Propionibacterium acnes HL044PA1]
 gi|314972203|gb|EFT16300.1| prolyl-tRNA synthetase [Propionibacterium acnes HL037PA3]
          Length = 581

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 47/220 (21%), Positives = 92/220 (41%), Gaps = 11/220 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  +        ++E   HR L R   +  +A    GV  W   G ++ + + +  R +
Sbjct: 2   SQLFVRTLREDPADAEVPSHRWLVRAGYIRRVA---PGVYSWLPLGLRVLRRIEAICREE 58

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E++ P +L    ++++G W  Y  N+F +K      +      L P +     
Sbjct: 59  MAGIGAQEVSFPALLASDPYKETGRWAEYGDNLFRLKD-----RKGVDMLLGPTHEEMFT 113

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +      SY++LP+ L +  + YR+E      G++R R F   DA+ F   ++  ++  
Sbjct: 114 LMVKDLYSSYKDLPLCLYQIQNKYRDEARPR-AGILRGREFVMMDAYSFDVAQEGLDDAY 172

Query: 406 KIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
           +      I I+   GF+  +VK  + P     S+     A
Sbjct: 173 QAQRDAYIRIFNRLGFDYAIVKAMSGPMGGSRSEEFLAVA 212



 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/160 (15%), Positives = 54/160 (33%), Gaps = 8/160 (5%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           P  +   +  + R  + G I Q+            ++ + +    V +     G      
Sbjct: 407 PAPDGSGELHLSRGIEIGHIFQLGKKYADALGLKVLDHNGKLVT-VTMGSYGLGVSRAVA 465

Query: 536 GIMIENFKGNLPLWL---SP--IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
            I          +W    +P  +Q + T   +  ++ A  IA+ L    L +  D R  +
Sbjct: 466 AIAEGTCDEKGLVWPREVAPFDVQVLATGKGTDILDEATRIASELAEVGLEVLLDDRKAS 525

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
              K  +  I  +P  ++ G +   +  + +R   +   +
Sbjct: 526 PGVKFADSEILGVPTSVVVG-RGLKDGLVEVRDRATGEAR 564


>gi|169823842|ref|YP_001691453.1| prolyl-tRNA synthetase [Finegoldia magna ATCC 29328]
 gi|226701290|sp|B0RZJ0|SYP_FINM2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|167830647|dbj|BAG07563.1| prolyl-tRNA synthetase [Finegoldia magna ATCC 29328]
          Length = 576

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 86/198 (43%), Gaps = 11/198 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
            +  +       +++E   H+ L R   +   A    G+  +   G++I + + + +R +
Sbjct: 4   NKFYMPTLREDPQDAEIASHKLLLRAGMIRKTAA---GLYSYLPLGYRIVRKVENIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           + +   +EI+ P    + +W++SG W ++   MF +K  ++     R F L P       
Sbjct: 61  MDNYGSQEIHMPITQPREIWEESGRWKTFGPEMFKLKDRNN-----REFCLGPTAEEYFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    +KSY++LP+ + +  + YR+E      G+ R R F   DA+ F   E+   E  
Sbjct: 116 DLVKGEIKSYKQLPLNIYQIQTKYRDEKRPRF-GINRSREFLMQDAYTFDVNEEAMGEAY 174

Query: 406 -KIHNLIISIYKDFGFEK 422
             +      ++   G E 
Sbjct: 175 MNMWRAYEVVFNRLGLEY 192



 Score = 75.2 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 61/164 (37%), Gaps = 9/164 (5%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
             R  + G I Q+        NA +++ + ++    M    + G       I+ +N    
Sbjct: 401 FKRGIEVGNIFQLGQKYSKSMNATFLDENGKEQFFWMGSYGI-GVTRSVSAIVEQNHDDK 459

Query: 546 LPLWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
             +W    +P   I+T +          A+++   L    + +  D R E +  K  +  
Sbjct: 460 GMIWPLVVAPYHVIITIVNTKDEEQNTLAEKLYEKLLLQGVEVLLDDRKERVGVKFNDRD 519

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  IP+ I  G K A+E  +      +    ++S  +A   + +
Sbjct: 520 LIGIPLRITVGKK-AAEDIVEFSERRTLENVEMSSTEAYEKVME 562


>gi|237738009|ref|ZP_04568490.1| prolyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
 gi|229419889|gb|EEO34936.1| prolyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
          Length = 569

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 70/369 (18%), Positives = 132/369 (35%), Gaps = 46/369 (12%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  +       +E+E   H+ L R   +  +    SGV  +   G K  + + + +RR
Sbjct: 3   FSKSYIKTLKETPKEAEIASHKLLLRAGMIKKL---TSGVYTYLPLGLKALKKVENIVRR 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +EI  P +    LW++SG W+     M  ++      +  R F L P +    
Sbjct: 60  EMDRAGAQEIFMPVLQPAELWKESGRWEVMGPLMMKLQD-----RAKRDFVLGPTHEEVV 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNE 403
             V  + + SY++LP+ L +  + +R+E      GLMR R F   DA+ F  T+E +  E
Sbjct: 115 TDVIRNDVASYKQLPLNLYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSFHATRESLDEE 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +      I+   G +   V+  +      GS      A            +S +D I
Sbjct: 174 FDNMEATYKRIFSSCGLKFRPVEADSGAIGGSGSKEFHVLA------------DSGEDEI 221

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
                  E   Y    E  +      + +        + P+      V  + +    V +
Sbjct: 222 IY----CESCDYAANVETAVSKVFHAEKEELKAVELVDTPNVSKIEDVVEYLK----VPV 273

Query: 524 HRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIE 583
            R V   + R +G                 Q  +  I         ++ N + +  + + 
Sbjct: 274 ERTVKAMMYRDMGT---------------DQVYMVLIRGDYEVNETKLKNAVDAIEVELL 318

Query: 584 TDFRNETIN 592
           TD + E + 
Sbjct: 319 TDEQLEKLG 327



 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/165 (19%), Positives = 64/165 (38%), Gaps = 9/165 (5%)

Query: 486 AIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           A  R  + G I  +      +  A +++      HP+++     G        + +N   
Sbjct: 402 ASARGIEVGHIFKLGTKYSEKLEATFIDEKGV-THPIIMGCYGIGVSRTLASAIEQNNDE 460

Query: 545 NLPLWLSPIQAIVTTITS------SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
              +W S I   V  +          V  A+E+ N L    +    D R+E   +K ++ 
Sbjct: 461 FGIVWPSAIAPYVVDVIPANMKDAEQVALAEELYNSLLDEGIDTILDDRDERPGFKFKDA 520

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +   P  +ICG K A+E  + ++   +  T ++S  + I  + +
Sbjct: 521 DLIGFPFKVICGKK-AAEGIVELKIRKTGETFEISKDEVIYKVRE 564


>gi|167039496|ref|YP_001662481.1| prolyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|300915254|ref|ZP_07132569.1| prolyl-tRNA synthetase [Thermoanaerobacter sp. X561]
 gi|307725178|ref|YP_003904929.1| prolyl-tRNA synthetase [Thermoanaerobacter sp. X513]
 gi|226701350|sp|B0K5F2|SYP_THEPX RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|166853736|gb|ABY92145.1| prolyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|300888978|gb|EFK84125.1| prolyl-tRNA synthetase [Thermoanaerobacter sp. X561]
 gi|307582239|gb|ADN55638.1| prolyl-tRNA synthetase [Thermoanaerobacter sp. X513]
          Length = 570

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 46/216 (21%), Positives = 92/216 (42%), Gaps = 11/216 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  +        E+E   H  + +   +  +A   SGV  +   G ++ + +   +R +
Sbjct: 4   SQLLVPTLREIPAEAEIPSHILMLKAALMRKLA---SGVYIYLPLGQRVLRKVEQIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E+    ++   L ++SG WD +   MF +K  ++     R F L P +     
Sbjct: 61  MDRAGSQEVLMSALIPAELLKESGRWDVFGPEMFKLKDRNE-----RDFCLGPTHEEVFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +  + +KSYR+LP+ L +  + +R+E      G+MR R F   DA+ F    E +    
Sbjct: 116 DLIRNEVKSYRQLPLILYQIQTKFRDERRPRF-GVMRSREFIMKDAYSFDVDWEGLDKSF 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            K++     I+   G + ++V+  +       S   
Sbjct: 175 NKMYEAYCRIFDRCGLKYLVVEADSGAMGGKDSKEF 210



 Score = 89.5 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 28/164 (17%), Positives = 60/164 (36%), Gaps = 9/164 (5%)

Query: 487 IGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           I R  + G I  +         A YV+    +  P+++     G       I+ ++    
Sbjct: 403 IDRGIEVGHIFKLGTKYSDALGAKYVDEEGNEK-PIIMGCYGIGINRTVAAIIEQHHDEK 461

Query: 546 LPLWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
             +W    +P   I+  +     +    A++I   L+   + +  D R+     K  +  
Sbjct: 462 GIIWPMSVAPYHVIIVPVNVSNEAQNRVAEDIYAALQKEGIEVLIDDRDLRAGVKFNDAD 521

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  IPI I  G K   +  + I+   +   ++V + D +  +  
Sbjct: 522 LLGIPIRITVGKK-VDDGIVEIKLRENEEAEEVKISDVVEKVKN 564


>gi|50842977|ref|YP_056204.1| prolyl-tRNA synthetase [Propionibacterium acnes KPA171202]
 gi|289428734|ref|ZP_06430417.1| proline--tRNA ligase [Propionibacterium acnes J165]
 gi|295131048|ref|YP_003581711.1| proline--tRNA ligase [Propionibacterium acnes SK137]
 gi|81826419|sp|Q6A7L9|SYP_PROAC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|50840579|gb|AAT83246.1| prolyl-tRNA synthetase [Propionibacterium acnes KPA171202]
 gi|289158132|gb|EFD06352.1| proline--tRNA ligase [Propionibacterium acnes J165]
 gi|291375052|gb|ADD98906.1| proline--tRNA ligase [Propionibacterium acnes SK137]
 gi|332675928|gb|AEE72744.1| proline--tRNA ligase [Propionibacterium acnes 266]
          Length = 585

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 48/220 (21%), Positives = 92/220 (41%), Gaps = 11/220 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  +        ++E   HR L R   +  +A    GV  W   G ++ + + +  R +
Sbjct: 6   SQLFVRTLREDPADAEVPSHRWLVRAGYIRRVA---PGVYSWLPLGLRVMRRIEAICREE 62

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E++ P +L    ++++G W  Y  N+F +K      +      L P +     
Sbjct: 63  MASIGAQEVSFPALLASDPYKETGRWVEYGDNLFRLKD-----RKGVDMLLGPTHEEMFT 117

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +      SY++LP+ L +  + YR+E      G++R R F   DA+ F   ++  +E  
Sbjct: 118 LMVKDLYSSYKDLPLCLYQIQNKYRDEARPR-AGILRGREFVMMDAYSFDVAQEGLDEAY 176

Query: 406 KIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
           +      I I+   GF+  +VK  + P     S+     A
Sbjct: 177 QAQRDAYIRIFNRLGFDYAIVKAMSGPMGGSRSEEFLAVA 216



 Score = 74.4 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 59/162 (36%), Gaps = 8/162 (4%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I Q+            ++ + +    V +     G       I          
Sbjct: 423 RGIEIGHIFQLGKKYADALGLKVLDHNGKLVT-VTMGSYGLGVSRAVAAIAEGTCDEKGL 481

Query: 548 LWL---SP--IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            W    +P  +Q + T   +  ++ A  IA+ L    L +  D R  +   K  +  I  
Sbjct: 482 CWPREVAPYDVQVLATGKGTEILDEATRIASELAEAGLEVLLDDRKASPGVKFADSEILG 541

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P  ++ G +   +  + +R   +   ++VS+ +A+  + KE
Sbjct: 542 MPTSVVVG-RGLKDGLVEVRDRSTGENRQVSVAEAVCAVLKE 582


>gi|328907631|gb|EGG27395.1| proline--tRNA ligase [Propionibacterium sp. P08]
          Length = 585

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 47/220 (21%), Positives = 92/220 (41%), Gaps = 11/220 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  +        ++E   HR L R   +  +A    GV  W   G ++ + + +  R +
Sbjct: 6   SQLFVRTLREDPADAEVPSHRWLVRAGYIRRVA---PGVYSWLPLGLRVLRRIEAICREE 62

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E++ P +L    ++++G W  Y  N+F +K      +      L P +     
Sbjct: 63  MAGIGAQEVSFPALLASDPYKETGRWAEYGDNLFRLKD-----RKGVDMLLGPTHEEMFT 117

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +      SY++LP+ L +  + YR+E      G++R R F   DA+ F   ++  ++  
Sbjct: 118 LMVKDLYSSYKDLPLCLYQIQNKYRDEARPR-AGILRGREFVMMDAYSFDVAQEGLDDAY 176

Query: 406 KIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
           +      I I+   GF+  +VK  + P     S+     A
Sbjct: 177 QAQRDAYIRIFNRLGFDYAIVKAMSGPMGGSRSEEFLAVA 216



 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/160 (15%), Positives = 54/160 (33%), Gaps = 8/160 (5%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           P  +   +  + R  + G I Q+            ++ + +    V +     G      
Sbjct: 411 PAPDGSGELHLSRGIEIGHIFQLGKKYADALGLKVLDHNGKLVT-VTMGSYGLGVSRAVA 469

Query: 536 GIMIENFKGNLPLWL---SP--IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
            I          +W    +P  +Q + T   +  ++ A  IA+ L    L +  D R  +
Sbjct: 470 AIAEGTCDEKGLVWPREVAPFDVQVLATGKGTDILDEATRIASELAEVGLEVLLDDRKAS 529

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
              K  +  I  +P  ++ G +   +  + +R   +   +
Sbjct: 530 PGVKFADSEILGVPTSVVVG-RGLKDGLVEVRDRATGEAR 568


>gi|313773524|gb|EFS39490.1| prolyl-tRNA synthetase [Propionibacterium acnes HL074PA1]
 gi|313831317|gb|EFS69031.1| prolyl-tRNA synthetase [Propionibacterium acnes HL007PA1]
 gi|313834927|gb|EFS72641.1| prolyl-tRNA synthetase [Propionibacterium acnes HL056PA1]
 gi|314974192|gb|EFT18288.1| prolyl-tRNA synthetase [Propionibacterium acnes HL053PA1]
 gi|314976699|gb|EFT20794.1| prolyl-tRNA synthetase [Propionibacterium acnes HL045PA1]
 gi|314984337|gb|EFT28429.1| prolyl-tRNA synthetase [Propionibacterium acnes HL005PA1]
 gi|315095331|gb|EFT67307.1| prolyl-tRNA synthetase [Propionibacterium acnes HL038PA1]
 gi|327328406|gb|EGE70168.1| proline--tRNA ligase [Propionibacterium acnes HL096PA2]
 gi|327444193|gb|EGE90847.1| prolyl-tRNA synthetase [Propionibacterium acnes HL043PA2]
 gi|327444928|gb|EGE91582.1| prolyl-tRNA synthetase [Propionibacterium acnes HL043PA1]
 gi|328760064|gb|EGF73644.1| proline--tRNA ligase [Propionibacterium acnes HL099PA1]
          Length = 581

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 48/220 (21%), Positives = 92/220 (41%), Gaps = 11/220 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  +        ++E   HR L R   +  +A    GV  W   G ++ + + +  R +
Sbjct: 2   SQLFVRTLREDPADAEVPSHRWLVRAGYIRRVA---PGVYSWLPLGLRVMRRIEAICREE 58

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E++ P +L    ++++G W  Y  N+F +K      +      L P +     
Sbjct: 59  MASIGAQEVSFPALLASDPYKETGRWVEYGDNLFRLKD-----RKGVDMLLGPTHEEMFT 113

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +      SY++LP+ L +  + YR+E      G++R R F   DA+ F   ++  +E  
Sbjct: 114 LMVKDLYSSYKDLPLCLYQIQNKYRDEARPR-AGILRGREFVMMDAYSFDVAQEGLDEAY 172

Query: 406 KIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
           +      I I+   GF+  +VK  + P     S+     A
Sbjct: 173 QAQRDAYIRIFNRLGFDYAIVKAMSGPMGGSRSEEFLAVA 212



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 59/162 (36%), Gaps = 8/162 (4%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I Q+            ++ + +    V +     G       I          
Sbjct: 419 RGIEIGHIFQLGKKYADALGLKVLDHNGKLVT-VTMGSYGLGVSRAVAAIAEGTCDEKGL 477

Query: 548 LWL---SP--IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            W    +P  +Q + T   +  ++ A  IA+ L    L +  D R  +   K  +  I  
Sbjct: 478 CWPREVAPYDVQVLATGKGTEILDEATRIASELAEAGLEVLLDDRKASPGVKFADSEILG 537

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P  ++ G +   +  + +R   +   ++VS+ +A+  + KE
Sbjct: 538 MPTSVVVGRR-LKDGLVEVRDRSTGENRQVSVAEAVCAVLKE 578


>gi|170288224|ref|YP_001738462.1| prolyl-tRNA synthetase [Thermotoga sp. RQ2]
 gi|226701351|sp|B1L8Y1|SYP_THESQ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|170175727|gb|ACB08779.1| prolyl-tRNA synthetase [Thermotoga sp. RQ2]
          Length = 577

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 54/235 (22%), Positives = 94/235 (40%), Gaps = 11/235 (4%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
            + E   H  L R   +   A    G+  +   G ++   + + +R ++     +EI  P
Sbjct: 16  SDVETVSHEYLLRGGFIRKTAA---GIYTYLPLGRRVLLKIENIVREEMNRIGAQEILMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW+QSG WD Y   M  +K      +  R F L P +      +  + L+SYR+
Sbjct: 73  ILQPAELWKQSGRWDDYGPEMMKLKD-----RHERDFTLGPTHEEIVTDLVKNELRSYRQ 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH-NLIISIYK 416
           LP+ + +  + YR+E      GL+R R F   DA+ F +  +  +E  ++       I +
Sbjct: 128 LPLVVYQVANKYRDEIRPRF-GLLRAREFIMKDAYSFHSSWESLDETYELFKEAYSRIME 186

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
             G + ++++  T       S      A+     VL   K   Q         GE
Sbjct: 187 RLGVKYMVIEAETGAIGGNASHEFVVPAKIGETNVLFCEKCGYQASDEKAEYKGE 241



 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 28/169 (16%), Positives = 67/169 (39%), Gaps = 17/169 (10%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF----KGNLPLWLSPI 553
           +         A++++ + E   P ++    +G   R +  ++E+F        PL ++P 
Sbjct: 412 LGTKYSEAMKAYFMDENGEMK-PFIMGCYGWGVS-RTMAAVVEHFHDENGMIWPLSIAPY 469

Query: 554 QAIV---TTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
             +V       +   +  ++I  +L      +  D R  +  +K ++  +   PI I  G
Sbjct: 470 TVVVDILNMNDAEQKQVGEKIYQVLSEKGEEVVLDDREVSPGFKFKDADLIGFPIRINVG 529

Query: 611 DKEASERSIGIRRFGSTTTQKV-------SLLDAIPILTKESLPPDCQK 652
            +   E  + +++  S    KV       +LL+ +  + +E  P +  +
Sbjct: 530 -RSLKEGVVELKKRYSKELVKVNIKNGFGTLLETLEKMKREYDPKEAAR 577


>gi|184201256|ref|YP_001855463.1| prolyl-tRNA synthetase [Kocuria rhizophila DC2201]
 gi|226701301|sp|B2GKS1|SYP_KOCRD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|183581486|dbj|BAG29957.1| prolyl-tRNA synthetase [Kocuria rhizophila DC2201]
          Length = 606

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 38/199 (19%), Positives = 79/199 (39%), Gaps = 11/199 (5%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
             H+ L R   +        G+  W   G  + + +   +R ++     +E++ P +L +
Sbjct: 23  DSHKLLVRAGYIR---RAAPGIYTWLPLGLAVLRRVEGIVREEMDAIGAQEVHFPALLPR 79

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             ++ S  W  Y  N+F ++      +    + L P +      +      SY++LPV L
Sbjct: 80  EPYEASNRWTEYGENLFRLQD-----RKGADYLLAPTHEEMFTLLVKDMYSSYKDLPVML 134

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKDFGFE 421
            +  + YR+E      GL+R R F   D++ F   +   ++    H    + I++  G  
Sbjct: 135 YQIQTKYRDEARPR-AGLLRGREFIMKDSYSFDVDDAGLDDAYAKHRAAYVRIFERLGLP 193

Query: 422 KIMVKLSTRPEKRVGSDAL 440
            + V  ++       S+  
Sbjct: 194 VVAVSATSGAMGGSRSEEF 212



 Score = 79.1 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 67/164 (40%), Gaps = 11/164 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE----NFK 543
           R  + G + Q+            ++++ +     M    +   + R +  + E       
Sbjct: 436 RGMEMGHVFQLGRKYAEALGLKVLDNNGKLVTVTMGSYGI--GVTRALAAVAEFYHDEHG 493

Query: 544 GNLPLWLSP--IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSI 600
              P  LSP  +  + T      +E A+EI   L++  +S+  D R + +   K R+  +
Sbjct: 494 LLWPRNLSPADVHVVATGKGPEVLEAAEEIVAHLEAAGVSVLFDDRPKVSPGVKFRDAEL 553

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
             +P +++ G +  ++  + ++   S T++ ++    +  +T E
Sbjct: 554 LGVPTVLVVG-RGLADGVLELKDRRSGTSRDIARDRVVAEITAE 596


>gi|224476386|ref|YP_002633992.1| prolyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus
           TM300]
 gi|222420993|emb|CAL27807.1| putative prolyl-tRNA synthetase [Staphylococcus carnosus subsp.
           carnosus TM300]
          Length = 566

 Score =  138 bits (348), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 51/221 (23%), Positives = 96/221 (43%), Gaps = 11/221 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        E+E   HR L +      I +  SGV  +     ++   + + +R +
Sbjct: 4   SKVFIPTMREVPAEAEALSHRLLLKAG---LIKQSTSGVYSYLPLATRVLNKITAIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++  D  EI  P +    LW++SG WD+Y + +  +     T ++ R FAL P +     
Sbjct: 61  MESIDAVEILMPALQPSELWEESGRWDAYGSELMRL-----TDRNGRQFALGPTHEEVVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           ++    +KSY++LP+ L +  S +R+E      GL+R R F   DA+ F   E   +E  
Sbjct: 116 SLVRDEVKSYKQLPLTLFQIQSKFRDEKRPRF-GLLRGREFIMKDAYSFHADEASLDETY 174

Query: 406 -KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
            ++++    I+K  G     V   +       +      +E
Sbjct: 175 NQMYDAYSRIFKRAGINARPVVADSGAIGGSHTHEFMALSE 215



 Score = 71.7 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 24/150 (16%), Positives = 55/150 (36%), Gaps = 9/150 (6%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQA-- 555
           +        NA ++++   K  P+++     G       I+ +N   N  +W   +    
Sbjct: 413 LGTKYSETMNATFLDNQG-KAKPLIMGCYGIGVSRTLSAIVEQNSDENGIVWPKSVTPFD 471

Query: 556 ----IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
                +        E   +I   L+     +  D R E    K  +  +  +PI I+ G 
Sbjct: 472 LHLITINPKKDDQRELGDQIYAELQQS-YEVLYDDRKERAGVKFNDADLIGLPIRIVVGK 530

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           + A E  + ++R  +  +++V + +    +
Sbjct: 531 R-ADEGIVEVKRRDNGESEEVEVSNLASYI 559


>gi|313811577|gb|EFS49291.1| prolyl-tRNA synthetase [Propionibacterium acnes HL083PA1]
          Length = 581

 Score =  138 bits (348), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 48/220 (21%), Positives = 92/220 (41%), Gaps = 11/220 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  +        ++E   HR L R   +  +A    GV  W   G ++ + + +  R +
Sbjct: 2   SQLFVRTLREDPADAEVPSHRWLVRAGYIRRVA---PGVYSWLPLGLRVMRRIEAICREE 58

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E++ P +L    ++++G W  Y  N+F +K      +      L P +     
Sbjct: 59  MASIGAQEVSFPALLASDPYKETGRWVEYGDNLFRLKD-----RKGVDMLLGPTHEEMFT 113

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +      SY++LP+ L +  + YR+E      G++R R F   DA+ F   ++  +E  
Sbjct: 114 LMVKDLYSSYKDLPLCLYQIQNKYRDEARPR-AGILRGREFVMMDAYSFDVAQEGLDEAY 172

Query: 406 KIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
           +      I I+   GF+  +VK  + P     S+     A
Sbjct: 173 QAQRDAYIRIFNRLGFDYAIVKAMSGPMGGSRSEEFLAVA 212



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 59/162 (36%), Gaps = 8/162 (4%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I Q+            ++ + +    V +     G       I          
Sbjct: 419 RGIEIGHIFQLGKKYADALGLKVLDHNGKLVT-VTMGSYGLGVSRAVAAIAEGTCDEKGL 477

Query: 548 LWL---SP--IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            W    +P  +Q + T   +  ++ A  IA+ L    L +  D R  +   K  +  I  
Sbjct: 478 CWPREVAPYDVQVLATGKGTEILDEATRIASELAEAGLEVLLDDRKASPGVKFADSEILG 537

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P  ++ G +   +  + +R   +   ++VS+ +A+  + KE
Sbjct: 538 MPTSVVVGRR-LKDGLVEVRDRSTGENRQVSVAEAVCAVLKE 578


>gi|212697111|ref|ZP_03305239.1| hypothetical protein ANHYDRO_01677 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212675886|gb|EEB35493.1| hypothetical protein ANHYDRO_01677 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 447

 Score =  138 bits (348), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 46/209 (22%), Positives = 93/209 (44%), Gaps = 11/209 (5%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
           +++E + H+ L R   +   +   SGV  +   G ++   + + +R+ ++  D  E++T 
Sbjct: 9   QDAETQSHKLLVRGAFIRKTS---SGVYSYLPLGMRVINKIENIVRKSMEKYDSIEVSTS 65

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +  + +W++SG W ++   MF +K   D     R + L P       ++    L SY++
Sbjct: 66  VLQSKDIWEKSGRWQNFGPEMFKIKDRHD-----REYCLGPTAEEQFTSLIKDELNSYKQ 120

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYK 416
           LP+ L +  S +R+E      G+ R R F   DA+ F    E +     K+ +  + ++ 
Sbjct: 121 LPLNLYQIVSKFRDEKRPRF-GINRSRDFIMKDAYSFDVDMEGLEKSYQKMWDAYVEVFD 179

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
             G +  +V+  +       S      AE
Sbjct: 180 ALGLDYKIVEGDSGAMGGNTSHEFMALAE 208


>gi|256752497|ref|ZP_05493354.1| prolyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
 gi|256748632|gb|EEU61679.1| prolyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
          Length = 570

 Score =  138 bits (348), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 46/216 (21%), Positives = 92/216 (42%), Gaps = 11/216 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  +        E+E   H  + +   +  +A   SGV  +   G ++ + +   +R +
Sbjct: 4   SQLLVPTLREIPAEAEIPSHILMLKAALMRKLA---SGVYIYLPLGQRVLRKVEQIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E+    ++   L ++SG WD +   MF +K  ++     R F L P +     
Sbjct: 61  MDRAGSQEVLMSALIPAELLKESGRWDVFGPEMFKLKDRNE-----RDFCLGPTHEEVFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +  + +KSYR+LP+ L +  + +R+E      G+MR R F   DA+ F    E +    
Sbjct: 116 DLIRNEVKSYRQLPLILYQIQTKFRDERRPRF-GVMRSREFIMKDAYSFDVDWEGLDKSF 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            K++     I+   G + ++V+  +       S   
Sbjct: 175 NKMYEAYCRIFDRCGLKYLVVEADSGAMGGKDSKEF 210



 Score = 89.5 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 28/164 (17%), Positives = 60/164 (36%), Gaps = 9/164 (5%)

Query: 487 IGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           I R  + G I  +         A YV+    +  P+++     G       I+ ++    
Sbjct: 403 IDRGIEVGHIFKLGTKYSDALGAKYVDEEGNEK-PIIMGCYGIGINRTVAAIIEQHHDEK 461

Query: 546 LPLWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
             +W    +P   I+  +     +    A++I   L+   + +  D R+     K  +  
Sbjct: 462 GIIWPMSVAPYHVIIVPVNVSNEAQNRVAEDIYAALQKEGIEVLIDDRDLRAGVKFNDAD 521

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  IPI I  G K   +  + I+   +   ++V + D +  +  
Sbjct: 522 LLGIPIRITVGKK-VDDGIVEIKLRENEEAEEVKISDVVEKVKN 564


>gi|255693100|ref|ZP_05416775.1| phosphoribulokinase family protein [Bacteroides finegoldii DSM
           17565]
 gi|260621142|gb|EEX44013.1| phosphoribulokinase family protein [Bacteroides finegoldii DSM
           17565]
          Length = 557

 Score =  138 bits (348), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 46/217 (21%), Positives = 95/217 (43%), Gaps = 3/217 (1%)

Query: 1   MPSDIKLTFPDGSI-KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-S 58
           M   +++   + +I K FP+ ++  D+    + +   + V+  +N +   L+  V     
Sbjct: 1   MKQMLQICCKNNNISKEFPIGSSLLDIYYGFNLNFPYQVVSAKVNNRSEGLNFRVYNNKD 60

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           IE +   D   +     S   ++ +AV  ++PE ++ +   +  G++ +    +P   ++
Sbjct: 61  IEFLDVRDQSGMRTYVRSLCFVLFKAVTELFPEGKLFVEHPVSKGYFCNLRIGRPVELED 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           + +I+++MQEIIA D  + +      +A  +F  +    KV +LE+         Y  G+
Sbjct: 121 VMRIKQRMQEIIAEDISYHRIECHTTEAVRIFSERGMNDKVRLLET-SGSLYTYYYTLGD 179

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRP 215
             D   G  + STG +K F  +    G   R  S   
Sbjct: 180 TVDYYYGNLLPSTGYLKLFDIVKYYDGLLLRIPSREN 216


>gi|164686598|ref|ZP_02210626.1| hypothetical protein CLOBAR_00190 [Clostridium bartlettii DSM
           16795]
 gi|164604327|gb|EDQ97792.1| hypothetical protein CLOBAR_00190 [Clostridium bartlettii DSM
           16795]
          Length = 566

 Score =  138 bits (348), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 45/238 (18%), Positives = 95/238 (39%), Gaps = 11/238 (4%)

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK 288
             +        ++E   H+ + R   +  +A   SG+      G ++F+ +   +R ++ 
Sbjct: 1   MLMPTLKEVPSDAEITSHQLMLRAGMIRKMA---SGIYNQLPMGIRVFRKVEDIIREEMN 57

Query: 289 D-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
               +EI+   ++   LWQ+SG WD     MF +K      ++ R + L P +      +
Sbjct: 58  AKGAQEISCALLVPAELWQESGRWDVMGPEMFRLKD-----RNGRDYCLGPTHEETFTHI 112

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-K 406
             + + SY++LP+ L +  + +R+E      G+MR R FT  DA+ F   ++  ++    
Sbjct: 113 VRNEITSYKQLPLNLYQIETKFRDERRPRF-GVMRTRNFTMKDAYSFDADQEGLDKSYDD 171

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
           + +    I+     +   V+  +       S      +E     ++          I 
Sbjct: 172 MFDAYTRIFARCELDNSPVQADSGAMGGSASAEFMVKSEVGEDEIVFCSGCDYAANIE 229



 Score = 91.4 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 31/166 (18%), Positives = 67/166 (40%), Gaps = 11/166 (6%)

Query: 487 IGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKG 544
           I R  + G I  +         A +++ +  K  P+++     G  ER +  +IE +   
Sbjct: 395 IMRGVEVGHIFKLGTKYSESMGATFLDQNG-KSQPIIMGCYGIGV-ERTVAAVIEQHHDE 452

Query: 545 NLPLWLSPIQAIVTTI------TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           N  +W   I      +          +E A++I   L++  + +  D RNE   +K ++ 
Sbjct: 453 NGIIWPLAIAPYHVVVVPVNVKKEEHLENAEKIYKELEAAGVEVLLDDRNERAGFKFKDS 512

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            +  IP+ I  G K+  +  +  +       + +S+ + +  +  E
Sbjct: 513 DLLGIPMRITVG-KDIVDGKVEFKLRKEADKEIISVDEVLDRVKAE 557


>gi|167721308|ref|ZP_02404544.1| prolyl-tRNA synthetase [Burkholderia pseudomallei DM98]
          Length = 568

 Score =  138 bits (348), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 45/213 (21%), Positives = 85/213 (39%), Gaps = 11/213 (5%)

Query: 234 YLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYE 292
                 ++E   H+ + R   +  +A    G+  +   G +  + + + +R ++      
Sbjct: 1   MKEAPADAEIVSHKLMVRAGMIRRVA---GGIYNYLPVGLRSIRKVEAIVREEMNRAGAI 57

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P V    LWQ+SG W+ Y   +  +K      +    F + P +      +  + +
Sbjct: 58  ELLMPAVQPAELWQESGRWEQYGPELLRIKD-----RKQNEFVIGPTHEEVVTDIARNQI 112

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLI 411
           KSYR++PV   +  + +R+E      G+MR R F   DA+ F    +   E   K+++  
Sbjct: 113 KSYRQMPVNFYQIQTKFRDEIRPRF-GVMRGREFIMKDAYSFDKDHESLKESYKKMYDAY 171

Query: 412 ISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
           + I+   G E   V          GS      A
Sbjct: 172 VRIFTRIGLEFRPVAADNGSIGGSGSHEFHVIA 204



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 23/154 (14%), Positives = 57/154 (37%), Gaps = 11/154 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE----NFK 543
           R  + G + Q+         A +++    K  P+++     G I R +G  IE    +  
Sbjct: 399 RGIEVGHVFQLGTKYSDAMGATFIDESG-KAQPMVMGCYGIG-ITRILGAAIEQNFDDKG 456

Query: 544 GNLPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
              P  ++P + ++  +    + +  E A ++   L +  + +  D R E       +  
Sbjct: 457 IVWPEAIAPFEVVLCPMGYDRSDAVREAADKLYANLAAAGIDVILDDRGERPGVMFADWE 516

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
           +  +P  ++ G++   +  I  +         + 
Sbjct: 517 LIGVPHRLVIGERGLKDGKIEYQGRRDAEATLLP 550


>gi|313829616|gb|EFS67330.1| prolyl-tRNA synthetase [Propionibacterium acnes HL063PA2]
          Length = 581

 Score =  138 bits (348), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 47/207 (22%), Positives = 89/207 (42%), Gaps = 11/207 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   HR L R   +  +A    GV  W   G ++ + + +  R ++     +E++ P 
Sbjct: 15  DAEVPSHRWLVRAGYIRRVA---PGVYSWLPLGLRVMRRIEAICREEMASIGAQEVSFPA 71

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L    ++++G W  Y  N+F +K      +      L P +      +      SY++L
Sbjct: 72  LLASDPYKETGRWVEYGDNLFRLKD-----RKGVDMLLGPTHEEMFTLMVKDLYSSYKDL 126

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKD 417
           P+ L +  + YR+E      G++R R F   DA+ F   ++  +E  +      I I+  
Sbjct: 127 PLCLYQIQNKYRDEARPR-AGILRGREFVMMDAYSFDVAQEGLDEAYQAQRDAYIRIFNR 185

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDA 444
            GF+  +VK  + P     S+     A
Sbjct: 186 LGFDYAIVKAMSGPMGGSRSEEFLAVA 212



 Score = 74.4 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 59/162 (36%), Gaps = 8/162 (4%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I Q+            ++ + +    V +     G       I          
Sbjct: 419 RGIEIGHIFQLGKKYADALGLKVLDHNGKLVT-VTMGSYGLGVSRAVAAIAEGTCDEKGL 477

Query: 548 LWL---SP--IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            W    +P  +Q + T   +  ++ A  IA+ L    L +  D R  +   K  +  I  
Sbjct: 478 CWPREVAPYDVQVLATGKGTEILDEATRIASELAEAGLEVLLDDRKASPGVKFADSEILG 537

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P  ++ G +   +  + +R   +   ++VS+ +A+  + KE
Sbjct: 538 MPTSVVVG-RGLKDGLVEVRDRSTGENRQVSVAEAVCAVLKE 578


>gi|87123890|ref|ZP_01079740.1| tRNA synthetases, class-II (G, H, P and S):Prolyl-tRNA synthetase
           [Synechococcus sp. RS9917]
 gi|86168459|gb|EAQ69716.1| tRNA synthetases, class-II (G, H, P and S):Prolyl-tRNA synthetase
           [Synechococcus sp. RS9917]
          Length = 594

 Score =  138 bits (348), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 66/288 (22%), Positives = 112/288 (38%), Gaps = 11/288 (3%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +  +   GSG+  +    W++ Q + + +R ++      E   PQ
Sbjct: 17  DAEIASHQLLLRGGFIRRV---GSGIYAYLPLMWRVLQRINAIVREEMNALGALETLLPQ 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW++SG W  Y A    +   DD  +  R   L P +     ++    L+SYR+L
Sbjct: 74  LQPAELWERSGRWQGYTAGEGIMFHLDD--RQGRQLGLGPTHEEVITSLAGELLRSYRQL 131

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKD 417
           PV L +  S +R+E      GLMR R F   DA+ F         C    +     I+  
Sbjct: 132 PVTLYQIQSKFRDEIRPRF-GLMRGREFIMKDAYSFHADASDLQACYGAMDGAYRRIFDR 190

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
            G + + V+  +       S      AE     +L +   S    +   V +   A   P
Sbjct: 191 CGLQTVAVEADSGAIGGAASQEFMVTAEAGEDLILMSESGSYAANLEKAVSIAPDAIPLP 250

Query: 478 KFEYILKDAIGR---DWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
           + +    D  G+   +  C   Q+D +   +  A      S    PV+
Sbjct: 251 EGDSRSIDTPGQHTIEALCRAQQLDPSQVVKVLALIARMASGSERPVL 298



 Score = 81.0 bits (198), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 26/162 (16%), Positives = 61/162 (37%), Gaps = 13/162 (8%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN- 545
           R  + G I Q+        +A + N+   +     +    +G  + R     +E    + 
Sbjct: 430 RGIEVGHIFQLGRKYSQAMDASFTNADGGQEA---LWMGCYGIGVSRLAQAAVEQHHDDA 486

Query: 546 ---LPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
               PL ++P Q IV       ++     +++   L +  +    D R E    K ++  
Sbjct: 487 GICWPLAIAPFQVIVVVANLQEATQRSLGEDLYARLMAQGVDALLDDRQERAGVKFKDAD 546

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           +  IP  I+ G + A++  + +    +     +++  A+  +
Sbjct: 547 LIGIPWRIVVG-RAAADGQVELVERATRQADVLTVDAALERV 587


>gi|229086371|ref|ZP_04218548.1| Prolyl-tRNA synthetase [Bacillus cereus Rock3-44]
 gi|228696983|gb|EEL49791.1| Prolyl-tRNA synthetase [Bacillus cereus Rock3-44]
          Length = 566

 Score =  138 bits (348), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 46/203 (22%), Positives = 89/203 (43%), Gaps = 11/203 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R +++     E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPLGLKVLHKVERIVREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K  +D     R FAL   +      +    +KSY++L
Sbjct: 74  LQAAELWQESGRWYSYGSELMRMKDRND-----REFALGATHEEVITDLVRDEIKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKD 417
           P+ L +  + +R+E      GL+R R F   DA+ F  T+E +     +++    +I+  
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEVYSRLYQAYSNIFSR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDAL 440
            G     V   +       +   
Sbjct: 188 CGLNFRAVIADSGAMGGKDTHEF 210



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/157 (15%), Positives = 60/157 (38%), Gaps = 11/157 (7%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G +  +        NA +++ + +   P+++     G   R +  + E F     
Sbjct: 404 RGIEVGHVFKLGTRYSEAMNATFLDENGKMK-PLIMGCYGIGVS-RTVAAIAEQFNDENG 461

Query: 546 --LPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              P  ++P    V  +   + +  E  + I + L+     +  D R E    K  +  +
Sbjct: 462 LVWPKAVAPFHVHVIPVNMKSDAQREVGETIYSSLQEQGYEVLLDDRTERAGVKFADADL 521

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
             +P+ +  G K A E  + ++   +  + +V + + 
Sbjct: 522 FGLPVRVTVGKK-ADEGIVEVKVRATNESAEVKVEEL 557


>gi|91078076|ref|XP_971952.1| PREDICTED: similar to prolyl-tRNA synthetase [Tribolium castaneum]
          Length = 448

 Score =  138 bits (348), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 82/447 (18%), Positives = 156/447 (34%), Gaps = 38/447 (8%)

Query: 217 LSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIF 276
           L R+                   +   +  R +    +L  I +   G   +   G K  
Sbjct: 6   LHRLSRLFQPVSVVPKNAEVKRHDITSKSQRLML---ELGIIRQASPGCFHFLPLGVKSL 62

Query: 277 QTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFA 335
           + L   +  ++K    ++I  P + +  LW+++G  ++  + +F +K   D     +++ 
Sbjct: 63  EKLTRLVDEEMKKIGGQKIIFPTLTNAKLWEKTGRLETVSSELFQIKDRHD-----QSYI 117

Query: 336 LKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           L P +      +       SY+ LP++L +  S YR+E      GLMR + F   D + F
Sbjct: 118 LSPTHEEAASNLLASLAPISYKHLPLKLYQITSKYRDEMKPRF-GLMRGKQFLMKDMYSF 176

Query: 395 CTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
            T  E   +   +I      I++  G + + V   +       S      A+     +L 
Sbjct: 177 DTDLETAKHTYDEICKSYDRIFRRIGIDFVKVVGCSGHMGGELSHEYHYKADVGEDKILT 236

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS 513
             K +     NT V   E           +   +G +    T  +        NA ++N+
Sbjct: 237 CNKCNYSA--NTEVSGEEKCPNCGNTSVKI--HLGIEV-GHTFLLGEKYSKPLNATFLNN 291

Query: 514 HSEKCHPVMIHRAVFG-SIERFIGIMIENF----KGNLPLWLSPIQAIVTTITSSAVE-- 566
           H +   P ++    +G  + R +  +IE      +   P  LSP   I+    S + E  
Sbjct: 292 HGK---PDVLQMGSYGLGLSRILAAVIEVMSSEQEIRWPQILSPYSVIILPPKSGSKEET 348

Query: 567 ------YAQEIANLLK---SHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASE 616
                     +   ++   +   ++  D R   TI  +  E      P I+  G K    
Sbjct: 349 HIKDSGLVDSLYEKIETTCNLQDNVLIDDRTNFTIGRRFLEAKKNGYPFIVTLGKKIVEN 408

Query: 617 RSI-GIRRFGSTTTQKVSLLDAIPILT 642
             +  I    +  T  +S  D +  L 
Sbjct: 409 PLLYEITNLKTNETLFLSENDLMNYLR 435


>gi|194014474|ref|ZP_03053091.1| prolyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
 gi|194013500|gb|EDW23065.1| prolyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
          Length = 565

 Score =  138 bits (347), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 50/235 (21%), Positives = 99/235 (42%), Gaps = 11/235 (4%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           ++E + H+ L R      I ++ SG+  +     K+ Q + S +R++++     E+  P 
Sbjct: 17  DAEAKSHQLLVRAG---FIRQNTSGIYHYLPLAHKVIQHIQSIVRKEMEKAGAAELLMPV 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    +WQ+SG W +Y   +  +K      +  R FAL P +     ++    +KSY++L
Sbjct: 74  LQQAEMWQESGRWYTYGPELMRMKD-----RHGREFALGPTHEEVITSLVRSEVKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKD 417
           P+ L +  S +R+E      GL+R R F   DA+ F  + E + +   K+     +++  
Sbjct: 129 PLTLYQIQSKFRDEQRPRF-GLLRGREFIMKDAYSFHSSPESLDDTYNKMFTAYSNVFSK 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
            G     V   +       +      +E     +  +  +S    I     +  G
Sbjct: 188 VGLNFRPVIADSGAMGGKDTHEFMALSEVGEDTIAYSDTSSYAANIEMAEAVYRG 242



 Score = 80.6 bits (197), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 23/152 (15%), Positives = 57/152 (37%), Gaps = 8/152 (5%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI- 556
           +        +A Y++ +  +  P+++     G       I+ ++      +W   +    
Sbjct: 415 LGTRYSESMDATYLDENG-RAQPMIMGCYGIGISRTLSAIVEQHHDEKGIIWPEAVAPYD 473

Query: 557 -----VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
                +     +  E A+ +   L+     +  D R E    K  +  +  +PI I CG 
Sbjct: 474 LHLLALNMKNDAQKELAETLYERLEDEGFDVLFDDRQERAGVKFADSDLIGLPIRISCGK 533

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           + + E  + ++   S  + +VS+ + I  + +
Sbjct: 534 R-SEEGIVEVKFRKSGESHEVSVDELISFIRQ 564


>gi|326391122|ref|ZP_08212668.1| prolyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
 gi|325992821|gb|EGD51267.1| prolyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
          Length = 570

 Score =  138 bits (347), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 46/216 (21%), Positives = 92/216 (42%), Gaps = 11/216 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  +        E+E   H  + +   +  +A   SGV  +   G ++ + +   +R +
Sbjct: 4   SQLLVPTLREIPAEAEIPSHILMLKAALMRKLA---SGVYIYLPLGQRVLRKVEQIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E+    ++   L ++SG WD +   MF +K  ++     R F L P +     
Sbjct: 61  MDRAGSQEVLMSALIPAELLKESGRWDVFGPEMFKLKDRNE-----RDFCLGPTHEEVFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +  + +KSYR+LP+ L +  + +R+E      G+MR R F   DA+ F    E +    
Sbjct: 116 DLIRNEVKSYRQLPLILYQIQTKFRDERRPRF-GVMRSREFIMKDAYSFDVDWEGLDKSF 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            K++     I+   G + ++V+  +       S   
Sbjct: 175 NKMYEAYCRIFDRCGLKYLVVEADSGAMGGKDSKEF 210



 Score = 88.7 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 28/164 (17%), Positives = 59/164 (35%), Gaps = 9/164 (5%)

Query: 487 IGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           I R  + G I  +         A YV+    +  P+++     G       I+ ++    
Sbjct: 403 IDRGIEVGHIFKLGTKYSDALGAKYVDEEGNEK-PIIMGCYGIGINRTVAAIIEQHHDEK 461

Query: 546 LPLWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
             +W    +P   I+  +     +    A++I   L+   + +  D R+     K  +  
Sbjct: 462 GIIWPMSVAPYHVIIVPVNVSNEAQNRVAEDIYAALQKEGIEVLIDDRDLRAGVKFNDAD 521

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  IPI I  G K   +  + I+       ++V + D +  +  
Sbjct: 522 LLGIPIRITVGKK-VDDGIVEIKLREKEEAEEVKISDVVEKVKN 564


>gi|224537666|ref|ZP_03678205.1| hypothetical protein BACCELL_02548 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224520725|gb|EEF89830.1| hypothetical protein BACCELL_02548 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 557

 Score =  138 bits (347), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 40/241 (16%), Positives = 98/241 (40%), Gaps = 3/241 (1%)

Query: 1   MPSDIKLTFPDGSI-KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-S 58
           M   +++   + +I K FP+ ++  D+    + +   + V+  +N +   L+  V     
Sbjct: 1   MKHMLQICCKNNNISKEFPIGSSLLDIYYGFNLNFPYQVVSAKVNNRSEGLNFRVYNNKD 60

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           +E +   D   L     S   ++ +AV  ++P+ ++ +   +  G++ +    +  + ++
Sbjct: 61  VEFLDIRDSSGLRTYVRSLCFVLYKAVNELFPDGKLFVEHPVSKGYFCNLRIGRTITLED 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           ++ I+K+MQEII ++  + +      +A  +F  +    KV++LE+         Y   +
Sbjct: 121 VSAIKKRMQEIIDKNITYRRTECHTTEAVRIFNERGMTDKVKLLET-SGSIYTYYYSLED 179

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             D   G  + STG +  F  +    G   R  + +               ++ +     
Sbjct: 180 TIDYYYGNLLPSTGFIWLFDIVKYYDGLLLRIPNRQNPNVLEEVVKQEKMLDVFKEHLRW 239

Query: 239 E 239
            
Sbjct: 240 N 240


>gi|239917224|ref|YP_002956782.1| prolyl-tRNA synthetase, family II [Micrococcus luteus NCTC 2665]
 gi|281414302|ref|ZP_06246044.1| prolyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
 gi|259511606|sp|C5C9S6|SYP_MICLC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|239838431|gb|ACS30228.1| prolyl-tRNA synthetase, family II [Micrococcus luteus NCTC 2665]
          Length = 608

 Score =  138 bits (347), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 42/203 (20%), Positives = 83/203 (40%), Gaps = 11/203 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E   HR L R   +        G+  W   G K+   +   +R ++     +E++ P 
Sbjct: 19  EAEVASHRLLVRAGYIR---RAAPGIYSWLPLGLKVLAKVERIVREEMDAIGAQEVHFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++ +G WD Y   +F ++      +    + L P +      +      SY++L
Sbjct: 76  LLPREPYEATGRWDEYGDGLFRLQD-----RRGNDYLLAPTHEEMFTLLVKDLYSSYKDL 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKD 417
           P  L +  + YR+E      GL+R R F   D++ F   +   +   + H    + I+  
Sbjct: 131 PAYLYQIQTKYRDEARPR-AGLLRGREFIMKDSYSFTVDDAGLDAAYEAHRAAYLRIFDR 189

Query: 418 FGFEKIMVKLSTRPEKRVGSDAL 440
            G E + V+ ++       S+  
Sbjct: 190 LGLEVVPVRATSGAMGGSRSEEF 212



 Score = 79.1 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 26/165 (15%), Positives = 69/165 (41%), Gaps = 13/165 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE----NF 542
           R  + G I Q+        +   ++ H ++   V++    +G  I R +  + E    + 
Sbjct: 443 RGMEMGHIFQLGRKYAEALDLKVLDVHGKQ---VVVTMGSYGIGITRAVAAIAERYHDDK 499

Query: 543 KGNLPLWLSP--IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHS 599
               P  ++P  +  +V T     +  A+ +A  L++  L++  D R + +   K ++  
Sbjct: 500 GLAWPRAVAPADVHVVVATKGEDGLAAAETLAASLEAEGLTVLVDDRPKVSPGVKFKDAE 559

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  +P  ++ G +  ++  + ++   +   + V +  A+  +  E
Sbjct: 560 LIGVPTTVVIG-RGLADGELELKDRATGEARPVPVDGAVAAVLAE 603


>gi|171910276|ref|ZP_02925746.1| prolyl-tRNA synthetase [Verrucomicrobium spinosum DSM 4136]
          Length = 510

 Score =  138 bits (347), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 73/450 (16%), Positives = 160/450 (35%), Gaps = 81/450 (18%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
             ++    ++++ R  DL   +E    ++     G+ I++ +  ++  K K+  ++    
Sbjct: 11  RADNFPEWYQQVVRAADLAENSEVRGCMVI-KPWGYGIWELIQKHLDAKFKETGHQNAYF 69

Query: 297 PQVLD-QHLWQQSGHWDSYRANMFAVKC--------------ADDTIKDLRTFALKPMNC 341
           P ++   +L +++ H + +      V                 + T K    F ++P + 
Sbjct: 70  PLLIPLSYLEKEAQHAEGFATECAVVTHHRLEAVKQPDGTVKMEPTGKLEEPFVIRPTSE 129

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQM 400
               A F   ++SYR+LP+ + ++ +V R E    L   +R   F   + H    T E+ 
Sbjct: 130 TIIGAAFARWVESYRDLPLLINQWANVMRWEMRPRL--FLRTAEFLWQEGHTAHETSEEA 187

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQ 460
             E   +H +                                  E+ ++  L       +
Sbjct: 188 MKEAKLMHGVY---------------------------------EDFLRNYLAIPAIPGE 214

Query: 461 DRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCH 519
               T      GA      E +++D   +  Q GT   +  N     N  ++   + + H
Sbjct: 215 K---TERERFPGALNTFTVEAMVQDR--KAIQAGTSHFLGQNFAKAANIEFLGRDNLRHH 269

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTIT------SSAVEYAQ 569
                   +G   R IG ++     +    LP  ++P Q ++  +T       + ++  +
Sbjct: 270 A---WTTSWGVSTRLIGTLLMAHADDDGAVLPPRIAPTQIVILPVTPKPDTKDAVIDACE 326

Query: 570 EIANLLKSHHL-----SIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI--R 622
            +A  L++H        +  D R+     +  E   K +P+ +  G ++ + RS+ +  R
Sbjct: 327 ALATTLRAHAFHGEPLRVHVDKRDIAGGARNWEWIKKGVPLRVEIGPRDITSRSVAVARR 386

Query: 623 RFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
             G    + +     I  +    +  D QK
Sbjct: 387 DRGPKEKEFIPKEQFIQDVGD--ILADIQK 414


>gi|307266366|ref|ZP_07547904.1| prolyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306918602|gb|EFN48838.1| prolyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 570

 Score =  138 bits (347), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 46/216 (21%), Positives = 92/216 (42%), Gaps = 11/216 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  +        E+E   H  + +   +  +A   SGV  +   G ++ + +   +R +
Sbjct: 4   SQLLVPTLREIPAEAEIPSHILMLKAALMRKLA---SGVYIYLPLGQRVLRKVEQIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E+    ++   L ++SG WD +   MF +K  ++     R F L P +     
Sbjct: 61  MDRAGSQEVLMSALIPAELLKESGRWDVFGPEMFKLKDRNE-----RDFCLGPTHEEVFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +  + +KSYR+LP+ L +  + +R+E      G+MR R F   DA+ F    E +    
Sbjct: 116 DLIRNEVKSYRQLPLILYQIQTKFRDERRPRF-GVMRSREFIMKDAYSFDVDWEGLDKSF 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            K++     I+   G + ++V+  +       S   
Sbjct: 175 NKMYEAYCRIFDRCGLKYLVVEADSGAMGGKDSKEF 210



 Score = 88.7 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 28/164 (17%), Positives = 59/164 (35%), Gaps = 9/164 (5%)

Query: 487 IGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           I R  + G I  +         A YV+    +  P+++     G       I+ ++    
Sbjct: 403 IDRGIEVGHIFKLGTKYSDALGAKYVDEEGNEK-PIIMGCYGIGINRTVAAIIEQHHDEK 461

Query: 546 LPLWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
             +W    +P   I+  +     +    A++I   L+   + +  D R+     K  +  
Sbjct: 462 GIIWPMSVAPYHVIIVPVNVSNEAQNRVAEDIYAALQKEGIEVLIDDRDLRAGVKFNDAD 521

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  IPI I  G K   +  + I+       ++V + D +  +  
Sbjct: 522 LLGIPIRITVGKK-VDDGIVEIKLREKEEAEEVKISDVVEKVKN 564


>gi|157692336|ref|YP_001486798.1| prolyl-tRNA synthetase [Bacillus pumilus SAFR-032]
 gi|166980100|sp|A8FDC1|SYP_BACP2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|157681094|gb|ABV62238.1| proline--tRNA ligase [Bacillus pumilus SAFR-032]
          Length = 565

 Score =  138 bits (347), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 50/235 (21%), Positives = 100/235 (42%), Gaps = 11/235 (4%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           ++E + H+ L R      I ++ SG+  +     K+ Q + S +R++++     E+  P 
Sbjct: 17  DAEAKSHQLLVRAG---FIRQNTSGIYHYLPLAHKVIQHIQSIVRKEMEKAGAAELLMPV 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    +WQ+SG W +Y   +  +K      +  R FAL P +     ++    +KSY++L
Sbjct: 74  LQQAEMWQESGRWYTYGPELMRMKD-----RHGREFALGPTHEEVITSLVRSEVKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKD 417
           P+ L +  S +R+E      GL+R R F   DA+ F  + E + +   K+     +++  
Sbjct: 129 PLTLYQIQSKFRDEQRPRF-GLLRGREFIMKDAYSFHSSPESLDDTYNKMFTAYSNVFSK 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
            G     V   +       +      +E     +  +  +S    I     + +G
Sbjct: 188 VGLNFRPVIADSGAMGGKDTHEFMALSEVGEDTIAYSDTSSYAANIEMAEAVYQG 242



 Score = 80.6 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 23/152 (15%), Positives = 58/152 (38%), Gaps = 8/152 (5%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI- 556
           +        +A Y++ +  +  P+++     G       I+ ++      +W   +    
Sbjct: 415 LGTRYSESMDATYLDENG-RAQPMIMGCYGIGISRTLSAIVEQHHDEKGIIWPEAVAPYD 473

Query: 557 -----VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
                +     +  E A+ +   L++    +  D R E    K  +  +  +PI I CG 
Sbjct: 474 LHLLALNMKNDAQKELAETLYERLENEGFDVLFDDRQERAGVKFADSDLIGLPIRISCGK 533

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           + + E  + ++   S  + +VS+ + I  + +
Sbjct: 534 R-SEEGIVEVKFRKSGESHEVSVDELISFIRQ 564


>gi|332295560|ref|YP_004437483.1| Prolyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
 gi|332178663|gb|AEE14352.1| Prolyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
          Length = 572

 Score =  138 bits (347), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 40/216 (18%), Positives = 86/216 (39%), Gaps = 11/216 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++           ++E   H  L R   +  ++   SG+  +     ++   + + +R +
Sbjct: 4   SKLFFKTLKEVPGDAEAISHVLLLRAGYIRRLS---SGIYTYLPLAKRVLLKIENIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           + + + +E+  P +  + +W+ SG W  Y   +   K   D     + +AL P +     
Sbjct: 61  MININSQELLLPALQPREIWEISGRWKKYGLELMRFKDRHD-----KDYALGPTHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            + N  + SY++LP+ + +  + +R+E      GLMR R F   DA+ F   E+  ++  
Sbjct: 116 DLINREVNSYKQLPISVFQIQTKFRDEIRPRF-GLMRTREFIMKDAYSFHRNEEDLDKTY 174

Query: 406 -KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
             + +    I    G     V+  +       S   
Sbjct: 175 WDMFHAYEKILTRMGLNFKSVEADSGAIGGSVSHEF 210



 Score = 77.1 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 56/147 (38%), Gaps = 9/147 (6%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPL-WL---SPI 553
           +         A++ +    K  P  +     G I R + I++E       + W    SP 
Sbjct: 416 LGTKYSEPMKAYFKDEDG-KEKPFEMGCYGIG-ISRLLAIVVEQHHDEFGIIWPNSISPY 473

Query: 554 QAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           Q I+        + +  ++ I   LK   +S+  D R+E    K ++  +  IPI II G
Sbjct: 474 QVIIIPTNINDKNQLTTSEMIFYELKERGISVLFDDRDERAGVKFKDADLLGIPIKIIIG 533

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDA 637
              +    + I+     ++  V   +A
Sbjct: 534 SHFSKSGLVEIKVRRDGSSNLVPPDEA 560


>gi|314936576|ref|ZP_07843923.1| proline--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
 gi|313655195|gb|EFS18940.1| proline--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
          Length = 566

 Score =  138 bits (347), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 55/251 (21%), Positives = 102/251 (40%), Gaps = 15/251 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        E+E   H+ L +      I +  SG+  +     ++   +   +R +
Sbjct: 4   SKVFIPTMREVPSEAEALSHQLLLKAG---LIKQSTSGIYSYLPLATRVLNHISRIIREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +++ D  EI  P +    LW++SG W +Y   +  +K      ++ R FAL P +     
Sbjct: 61  MENIDAVEILMPALQQAELWEESGRWGAYGPELMRLKD-----RNGREFALGPTHEEVVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           ++    LKSY++LP+ L +  S +R+E      GL+R R F   DA+ F   E   ++  
Sbjct: 116 SIVRDELKSYKQLPLTLFQIQSKFRDEKRPRF-GLLRGREFIMKDAYSFHADEASLDQTY 174

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
           + ++N    I+K  G     V   +       +      +E       DTI  S      
Sbjct: 175 QEMYNAYSRIFKRVGINARPVVADSGAIGGHHTHEFMALSEIGE----DTIVYSENSDYA 230

Query: 465 TGVLLGEGAFY 475
             +   E  +Y
Sbjct: 231 ANIEKAEVKYY 241



 Score = 67.1 bits (162), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 25/146 (17%), Positives = 57/146 (39%), Gaps = 9/146 (6%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQA-- 555
           +        NA ++++   K  P+++     G       I+ +N   N  +W   +    
Sbjct: 413 LGTKYSEAMNAKFLDNQG-KAQPLIMGCYGIGVSRTLSAIVEQNNDENGIIWPKSVTPFD 471

Query: 556 ----IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
                +       +E   ++ + L+S    +  D R E    K  +  +  +PI I+ G 
Sbjct: 472 LHLITINPKKEEQLELGDKLYSELQSK-YDVLYDDRKERAGVKFNDADLIGLPIRIVVG- 529

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDA 637
           K ASE  + ++   +  +++V + + 
Sbjct: 530 KNASEGIVEVKVRQTGESEEVHINEL 555


>gi|297571190|ref|YP_003696964.1| prolyl-tRNA synthetase [Arcanobacterium haemolyticum DSM 20595]
 gi|296931537|gb|ADH92345.1| prolyl-tRNA synthetase [Arcanobacterium haemolyticum DSM 20595]
          Length = 595

 Score =  138 bits (347), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 40/203 (19%), Positives = 82/203 (40%), Gaps = 11/203 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E R H+ L R   +        G+  W   G K+ + + + +R ++     +E++ P 
Sbjct: 15  DAEVRSHKLLVRAGYVR---RAAPGIYTWLPLGLKVLRKVEAVVREEMDAAGSQEMHFPA 71

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++ +  W+ Y  N+F +K      +    + L P +             SY++L
Sbjct: 72  LLPREPYEATNRWEEYGPNLFRLKD-----RRENDYLLAPTHEEMFTLAVKDMYSSYKDL 126

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKD 417
           PV L +    YR+E      G++R R F   DA+ F   +   +   + + N    I+  
Sbjct: 127 PVSLYQIQHKYRDEARPR-AGIIRTREFIMKDAYSFDIDDSGLDHSYETMRNAYQRIFTR 185

Query: 418 FGFEKIMVKLSTRPEKRVGSDAL 440
            G   ++    +       S+  
Sbjct: 186 LGVPFVICSAQSGAMGGSRSEEF 208



 Score = 81.0 bits (198), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 62/174 (35%), Gaps = 18/174 (10%)

Query: 482 ILKDAIG-----RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
              D  G     R  + G I Q+        +   ++ + +    V++    +G  + R 
Sbjct: 418 QAPDGSGPLSIERGIEIGHIFQLGRKYAKALDLKVLDQNGKA---VVVTMGSYGIGVSRV 474

Query: 535 IGIMIE----NFKGNLPLWLSPIQAIVTTIT--SSAVEYAQEIANLLKSHHLSIETDFRN 588
           +  + E    +     P  L+P    V       +  + A   A  L    + +  D R 
Sbjct: 475 MAALAELNSDDKGLAWPAHLAPATVHVIATGKDDAVFDTASRFAAELSEQGVEVIYDDRV 534

Query: 589 E-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           + +   K  ++ +  +P  I+ G +   +  + IR   S    +V + DA+  L
Sbjct: 535 KVSAGVKFADYELIGVPFAIVVG-RGLKDGKVEIRDRRSGENVEVPVGDALATL 587


>gi|298709965|emb|CBJ31687.1| Proline--tRNA ligase, central part [Ectocarpus siliculosus]
          Length = 492

 Score =  138 bits (347), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 66/390 (16%), Positives = 136/390 (34%), Gaps = 70/390 (17%)

Query: 270 RKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKC---- 323
             G  I+      M ++IK  D +    P ++ Q    +++ H D +      V      
Sbjct: 129 PWGMAIWDAFKDDMDKRIKTYDVDNAYFPLLIPQSFLTKEAEHVDGFAKECAVVTHHRLC 188

Query: 324 --------ADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
                    D   K      ++P +      ++   + SYR+LP++L ++ +V R E   
Sbjct: 189 KSDDGTLIPDPEAKLEEPLVVRPTSETVIWTMYRKWIDSYRDLPLKLNQWANVVRWEMR- 247

Query: 376 SLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
               L+R   F   + H    TKE+  +   ++     +  ++      ++ + +  E+ 
Sbjct: 248 -TRPLLRSAEFLWQEGHTAHATKEEALSCAQEMLVEYSTACRETLALPTVMGVKSPKERF 306

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
            G+D  +            TI+   Q+     +  G   F                    
Sbjct: 307 AGADETY------------TIEALMQNG--WALQSGTSHF-------------------- 332

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWL 550
              +  N    F  +Y     ++    ++    +G   R +G M+    ++F   LP  +
Sbjct: 333 ---LGQNFARAFEVYYQTPDEKRE---LVWATSWGVTTRLMGAMVMTHSDDFGLRLPPAV 386

Query: 551 SPIQAIVTTITSSAVE-------YAQEIANLLKSHHLSIETDFR-NETINYKIREHSIKK 602
           +P Q ++  IT    E           + + LK+  + ++ D R N     K  +   K 
Sbjct: 387 APKQVVIVPITKGPGEDTDLVNKAVDGVVDQLKAAGVRVKVDERPNMRPGAKYFQWEAKG 446

Query: 603 IPIIIICGDKEASER-SIGIRRFGSTTTQK 631
           +P+ +  G K      +I +++ G    Q 
Sbjct: 447 VPLPVELGPKNPKAGVAIVLKKKGGGGRQS 476


>gi|228474993|ref|ZP_04059721.1| proline--tRNA ligase [Staphylococcus hominis SK119]
 gi|228270978|gb|EEK12366.1| proline--tRNA ligase [Staphylococcus hominis SK119]
          Length = 566

 Score =  138 bits (347), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 55/251 (21%), Positives = 102/251 (40%), Gaps = 15/251 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        E+E   H+ L +      I +  SG+  +     ++   +   +R +
Sbjct: 4   SKVFIPTMREVPSEAEALSHQLLLKAG---LIKQSTSGIYSYLPLATRVLNHISRIIREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +++ D  EI  P +    LW++SG W +Y   +  +K      ++ R FAL P +     
Sbjct: 61  MENIDAVEILMPALQQAELWEESGRWGAYGPELMRLKD-----RNGREFALGPTHEEVVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           ++    LKSY++LP+ L +  S +R+E      GL+R R F   DA+ F   E   ++  
Sbjct: 116 SIVRDELKSYKQLPLTLFQIQSKFRDEKRPRF-GLLRGREFIMKDAYSFHADEASLDQTY 174

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
           + ++N    I+K  G     V   +       +      +E       DTI  S      
Sbjct: 175 QEMYNAYSRIFKRVGINARPVVADSGAIGGHHTHEFMALSEIGE----DTIVYSENSDYA 230

Query: 465 TGVLLGEGAFY 475
             +   E  +Y
Sbjct: 231 ANIEKAEVKYY 241



 Score = 68.3 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 25/146 (17%), Positives = 57/146 (39%), Gaps = 9/146 (6%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQA-- 555
           +        NA ++++   K  P+++     G       I+ +N   N  +W   +    
Sbjct: 413 LGTKYSEAMNAKFIDNQG-KAQPLIMGCYGIGVSRTLSAIVEQNNDENGIIWPKSVTPFD 471

Query: 556 ----IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
                +       +E   ++ + L+S    +  D R E    K  +  +  +PI I+ G 
Sbjct: 472 LHLITINPKKEEQLELGDKLYSELQSK-YDVLYDDRKERAGVKFNDADLIGLPIRIVVG- 529

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDA 637
           K ASE  + ++   +  +++V + + 
Sbjct: 530 KNASEGIVEVKVRQTGESEEVHINEL 555


>gi|41409011|ref|NP_961847.1| prolyl-tRNA synthetase [Mycobacterium avium subsp. paratuberculosis
           K-10]
 gi|81831677|sp|Q73VU8|SYP_MYCPA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|41397370|gb|AAS05230.1| ProS [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 582

 Score =  138 bits (347), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 55/360 (15%), Positives = 121/360 (33%), Gaps = 26/360 (7%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +  +A    G+  W   G ++ + +   +R ++     +EI  P 
Sbjct: 19  DAEVPSHKLLIRAGYIRPVA---PGLYSWLPLGLRVLRRIEHIVREEMNAIGGQEILFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++ +  W  Y  ++F ++      +    + L P +             SY++ 
Sbjct: 76  LLPRAPYEATNRWTEYGDSVFRLQD-----RRGNDYLLGPTHEELFTLTVKGEYSSYKDF 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKD 417
           PV L +  + YR+E      G++RVR F   D++ F   +         H      I+  
Sbjct: 131 PVLLYQIQNKYRDEARPR-AGILRVREFVMKDSYSFDIDDAGLKAAYHAHREAYQRIFAR 189

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
                ++V   +       S+    ++       +  +++     +   +         P
Sbjct: 190 LQVRYVIVSAVSGAMGGSASEEFLAESPVGEDTFVRCLESGYAANVEAVITARPD----P 245

Query: 478 K-FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           +  E + +  +       TI    +  +R       + ++    V++     G     + 
Sbjct: 246 QPVEGLPEAVVHDTGDTPTIATLVDWANRAGLGRAVTAADTLKNVLLKVRQPGGDWELLA 305

Query: 537 IMI----ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIA-----NLLKSHHLSIETDFR 587
           I +    E     L   L P    V    +    Y   +        LK + +    D R
Sbjct: 306 IGLPGDREVDDKRLGAALEP-AEYVLLDDADFARYPFLVKGYIGPKALKDNGVRYLVDPR 364



 Score = 74.0 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 26/160 (16%), Positives = 61/160 (38%), Gaps = 11/160 (6%)

Query: 484 KDAIGRDWQCGTI---QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG-SIERFIGIMI 539
            D  G       I    +        +AF  +   E   PV +    +G  + R + ++ 
Sbjct: 409 PDGAGPLVSARGIEVAHIFQLGRKYTDAFTADVLGEDGKPVRLTMGSYGLGVSRMVAVIA 468

Query: 540 ENFKGNLPL-WLSPIQA-----IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           E     L L W + +       ++    + A   A  +A+ L    + +  D R  +   
Sbjct: 469 EQHHDELGLRWPASVAPFDVHLVIANKDAQARAGATALADDLDRLGVEVLLDDRQASPGV 528

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
           K ++  +  +P I++ G +  ++  + +R   +  T++++
Sbjct: 529 KFKDAELLGVPWIVVVG-RGWADGVVELRDRFAGQTRELA 567


>gi|119963667|ref|YP_947320.1| prolyl-tRNA synthetase [Arthrobacter aurescens TC1]
 gi|152074745|sp|A1R508|SYP_ARTAT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|119950526|gb|ABM09437.1| prolyl-tRNA synthetase [Arthrobacter aurescens TC1]
          Length = 603

 Score =  138 bits (347), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 40/216 (18%), Positives = 84/216 (38%), Gaps = 11/216 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  L        ++E   H+ L R   +        G+  W   G  + + +   +R++
Sbjct: 6   SQLFLRTLREDPVDAEVDSHKLLVRAGYIR---RAAPGIYTWLPLGLSVLRKVEDIIRQE 62

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E++ P +L +  ++ +  W  Y   +F ++      +    + L P +     
Sbjct: 63  MSAIGAQEVHFPALLPREPYEATNRWTEYGEGLFRLQD-----RKGADYLLAPTHEEMFT 117

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +      SY++LP+ L +  + YR+E      GL+R R F   D++ F   +   +   
Sbjct: 118 LLVKDLYSSYKDLPLSLYQIQNKYRDEARPR-AGLLRGREFIMKDSYSFDIDDAGLDASY 176

Query: 406 KIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
             H    + I++  G E I V  +        S+  
Sbjct: 177 AAHRAAYLKIFERLGLEVIPVAATAGAMGGSKSEEF 212



 Score = 75.2 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 24/163 (14%), Positives = 62/163 (38%), Gaps = 11/163 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE----NFK 543
           R  + G I Q+        +   ++ + ++    M    V   + R +  + E    +  
Sbjct: 439 RGIEMGHIFQLGRKYAEALDLKVLDQNGKQQVVTMGSYGV--GVTRAVAALAEANNDDRG 496

Query: 544 GNLPLWLSP--IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSI 600
              P  ++P  +  +         E A++++  L++  L +  D R + +   K  +  +
Sbjct: 497 LVWPRSVAPADVHVVAVGRGDEIFEAAEKLSLELEAAGLDVIFDDRPKVSPGVKFGDAEL 556

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             +P I+  G +   +  + I+   S   + +S+  A+  +  
Sbjct: 557 VGVPTILAVG-RGLVDGVVEIKDRRSGEAENISVDKAVDYVVN 598


>gi|325962798|ref|YP_004240704.1| prolyl-tRNA synthetase, family II [Arthrobacter phenanthrenivorans
           Sphe3]
 gi|323468885|gb|ADX72570.1| prolyl-tRNA synthetase, family II [Arthrobacter phenanthrenivorans
           Sphe3]
          Length = 603

 Score =  138 bits (347), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 41/216 (18%), Positives = 84/216 (38%), Gaps = 11/216 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  L        ++E   HR L R   +        G+  W   G  + + + + +R +
Sbjct: 6   SQLFLRTLREDPVDAEVASHRLLVRAGYIR---RAAPGIYTWLPLGLSVLRKVEAVIREE 62

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E++ P +L +  ++ +  W  Y   +F ++      +    + L P +     
Sbjct: 63  MAAIGAQEVHFPALLPREPYEATNRWTEYGEGLFRLQD-----RKGADYLLAPTHEEMFT 117

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +      SY++LP+ L +  + YR+E      GL+R R F   D++ F   +   +   
Sbjct: 118 LLVKDLYSSYKDLPLSLYQIQNKYRDEARPR-AGLLRGREFIMKDSYSFDVDDAGLDASY 176

Query: 406 KIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
             H    + I++  G E I V  +        S+  
Sbjct: 177 AAHRGAYLRIFERLGLEVIPVTATAGAMGGSKSEEF 212



 Score = 75.2 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 24/163 (14%), Positives = 59/163 (36%), Gaps = 11/163 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G I Q+            ++ + ++    M    V   + R +  + E+      
Sbjct: 439 RGIEMGHIFQLGRKYAEALELKVLDQNGKQVTVTMGSYGV--GVTRAVAALAESNHDARG 496

Query: 546 --LPLWLSP--IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSI 600
              P  ++P  +  +           A+ +A  L++  L +  D R + +   K  +  +
Sbjct: 497 LVWPRAVAPADVHVVAVGKGEEIFATAERLAAELEAAGLDVLLDDRPKVSPGVKFGDAEL 556

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             +P I+  G +   +  + I+   S   + V++  A+  +  
Sbjct: 557 VGVPTILAVG-RGLVDGVVEIKDRRSGEAENVAVDKAVDYVVN 598


>gi|71279026|ref|YP_269920.1| prolyl-tRNA synthetase [Colwellia psychrerythraea 34H]
 gi|114152184|sp|Q47Z50|SYP_COLP3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|71144766|gb|AAZ25239.1| prolyl-tRNA synthetase [Colwellia psychrerythraea 34H]
          Length = 569

 Score =  138 bits (347), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 49/251 (19%), Positives = 99/251 (39%), Gaps = 15/251 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+        +E   H+ + R   + ++A   SG+  W   G ++ + +   +R 
Sbjct: 3   TSQYLLSTLKETPANAEVISHQLMLRAGLVRNLA---SGLYTWLPTGLRVLKKVEQIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           +++     EI  P V    LWQ+SG  D Y   +  +       +  R F L P +    
Sbjct: 60  EMQRAGGNEILMPMVQPADLWQESGRLDDYGPELLRIND-----RHKRPFVLGPTHEEVV 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LP+ + +  S +R+E      G+MR R F   DA+ F  +++   + 
Sbjct: 115 TKLVANELSSYKQLPLNVFQIQSKFRDEIRPRF-GVMRGREFLMKDAYSFHLEDECLEKT 173

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG---SDALWDDAENIMKGVLDTIKNSSQD 461
            +I  +  +  + F   ++  +        +G   S      A++    +  +  +    
Sbjct: 174 YQI--MFDAYCRIFERLELNFRPVLADTGSIGGEKSHEFHVLADSGEDDIAFSDASDFAA 231

Query: 462 RINTGVLLGEG 472
            I     L   
Sbjct: 232 NIEKAEALAPA 242



 Score = 81.4 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 25/165 (15%), Positives = 58/165 (35%), Gaps = 11/165 (6%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           I R  + G I Q+        N   +N   +     M    +   + R +   IE     
Sbjct: 407 IKRGIEVGHIFQLGRKYAEAMNCAVLNEGGKNQTLTMGCYGI--GVSRIVAAAIEQNHDK 464

Query: 546 LPL-WL---SPIQAIVTTITSS----AVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
             + W    +P Q  +  +  +      E A+ +   L    + +  D R E       +
Sbjct: 465 YGIKWPKAIAPFQVAIVPMNMAKSARVKETAEALYESLNQAGIEVLFDDRKERPGVMFAD 524

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           H +   P+++I G++    + I ++   +     +++ + + +  
Sbjct: 525 HELMGTPLLLIIGERNLDAQQIELKNRITGEKSLIAIDEVMSLFN 569


>gi|118463800|ref|YP_882877.1| prolyl-tRNA synthetase [Mycobacterium avium 104]
 gi|152112931|sp|A0QIY9|SYP_MYCA1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|118165087|gb|ABK65984.1| prolyl-tRNA synthetase [Mycobacterium avium 104]
          Length = 582

 Score =  138 bits (347), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 54/359 (15%), Positives = 118/359 (32%), Gaps = 24/359 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +  +A    G+  W   G ++ + +   +R ++     +EI  P 
Sbjct: 19  DAEVPSHKLLIRAGYIRPVA---PGLYSWLPLGLRVLRRIEHIVREEMNAIGGQEILFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++ +  W  Y  ++F ++      +    + L P +             SY++ 
Sbjct: 76  LLPRAPYEATNRWTEYGDSVFRLQD-----RRGNDYLLGPTHEELFTLTVKGEYSSYKDF 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKD 417
           PV L +  + YR+E      G++RVR F   D++ F   +         H      I+  
Sbjct: 131 PVLLYQIQNKYRDEARPR-AGILRVREFVMKDSYSFDIDDAGLKAAYHAHREAYQRIFAR 189

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
                ++V   +       S+    ++       +  +++     +   +          
Sbjct: 190 LQVRYVIVSAVSGAMGGSASEEFLAESPVGEDTFVRCLESGYAANVEAVITARPDPQPVE 249

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
                +    G      T+ VD+   +        + + K   + + +   G     + I
Sbjct: 250 GLPEAVVHDTGDTPTIATL-VDWANRAGLGRTVTAADTLKNVLLKVRQP--GGDWELLAI 306

Query: 538 MI----ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIA-----NLLKSHHLSIETDFR 587
            +    E     L   L P    V    +    Y   +        LK + +    D R
Sbjct: 307 GLPGDREVDDKRLGAALEP-AEYVLLDDADFARYPFLVKGYIGPKALKDNGVRYLVDPR 364



 Score = 74.0 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 26/160 (16%), Positives = 61/160 (38%), Gaps = 11/160 (6%)

Query: 484 KDAIGRDWQCGTI---QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG-SIERFIGIMI 539
            D  G       I    +        +AF  +   E   PV +    +G  + R + ++ 
Sbjct: 409 PDGAGPLVSARGIEVAHIFQLGRKYTDAFTADVLGEDGKPVRLTMGSYGLGVSRMVAVIA 468

Query: 540 ENFKGNLPL-WLSPIQA-----IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           E     L L W + +       ++    + A   A  +A+ L    + +  D R  +   
Sbjct: 469 EQHHDELGLRWPASVAPFDVHLVIANKDAQARAGATALADDLDRLGVEVLLDDRQASPGV 528

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
           K ++  +  +P I++ G +  ++  + +R   +  T++++
Sbjct: 529 KFKDAELLGVPWIVVVG-RGWADGVVELRDRFAGQTRELA 567


>gi|118444126|ref|YP_877464.1| phosphoribulokinase family protein [Clostridium novyi NT]
 gi|118134582|gb|ABK61626.1| phosphoribulokinase family protein [Clostridium novyi NT]
          Length = 552

 Score =  138 bits (347), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 56/238 (23%), Positives = 103/238 (43%), Gaps = 2/238 (0%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
           +I +TF D    +        ++++       K  +    NGK+ +L+  V  +G+ EI+
Sbjct: 3   NINITFKDNKKISVSKGTNLYEISKFFHVPDKKVPILAWFNGKIYELNHKVYEDGNFEIV 62

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
            P+   S+     +   I+ ++V+ ++P V+V I   +  G + +  KE P + +++  I
Sbjct: 63  DPKRKISVLAYMRTLQFILIKSVRDLYPGVKVRIEHSLSKGIFGEVSKETPLTQEDVKNI 122

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           + +MQEII +D    K  +  EKA E+F+      K+ +   +  K NVTLY     +D 
Sbjct: 123 KNRMQEIIDKDIVIHKLSVPKEKAIEIFKEYDMDAKLRMFAHVDNK-NVTLYELDGMYDY 181

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
             GP   STG V+ F  +    G   RG +                 ++        +
Sbjct: 182 FYGPMAYSTGHVRLFDLMYYEPGFILRGPTIDNCDKLPKFIEQKKLAKIFYESEKWAQ 239


>gi|222151097|ref|YP_002560251.1| proline-tRNA ligase [Macrococcus caseolyticus JCSC5402]
 gi|254782906|sp|B9EBE4|SYP_MACCJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|222120220|dbj|BAH17555.1| proline-tRNA ligase [Macrococcus caseolyticus JCSC5402]
          Length = 568

 Score =  138 bits (347), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 53/243 (21%), Positives = 98/243 (40%), Gaps = 11/243 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++ + H+ L +   +  +A   SGV  +     ++   + S +R +
Sbjct: 4   SKMFIPTLREVPSDADSKSHQLLLKAGMIKQVA---SGVYSYLPIAKRVLNKIESIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++  D  EI  P +    LW +SG W SY A +  +     T +  R FAL P +     
Sbjct: 61  MEAIDGVEILMPALQPSELWSESGRWQSYGAELMRM-----TDRHGREFALGPTHEEIIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           ++    LKSY++LPV L +  + +R+E      GL+R R F   DA+ F   E   +E  
Sbjct: 116 SLVRDELKSYKKLPVTLFQIQNKFRDEKRPRF-GLLRGREFIMKDAYSFHATEASLDETY 174

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
           + ++N    I+     +   V   +       +      AE     +  T  +     I 
Sbjct: 175 QDMYNAYSKIFSRLNLQFRPVIADSGAIGGSHTHEFMALAEIGEDTICYTDGSDYAANIE 234

Query: 465 TGV 467
              
Sbjct: 235 KAE 237



 Score = 71.4 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 20/151 (13%), Positives = 57/151 (37%), Gaps = 9/151 (5%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLS---PIQ 554
           +        NA ++N    +  P+++     G       ++ ++      +W +   P +
Sbjct: 413 LGTKYSESMNATFLNDQG-RAEPMIMGCYGIGVSRTLSAVIEQHNDDKGIIWPTAITPYE 471

Query: 555 AIVTTITSSAVEYAQEIANLLKSH---HLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
             + ++     E  + +A+ L         +  D R E    K  +  +  IP+ ++ G 
Sbjct: 472 VHIISVNPKQ-EVQKNLADQLYDTYRTQYEVLYDDRAERAGVKFNDADLIGIPVRVVVG- 529

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           K+A++  + ++   +    +V + +    + 
Sbjct: 530 KQAADGIVEVKNRRTGDAVEVHIDNLQETIQ 560


>gi|308176793|ref|YP_003916199.1| proline--tRNA ligase [Arthrobacter arilaitensis Re117]
 gi|307744256|emb|CBT75228.1| proline--tRNA ligase [Arthrobacter arilaitensis Re117]
          Length = 595

 Score =  138 bits (347), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 84/203 (41%), Gaps = 11/203 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +        G+  W   G K+   + + +R ++     +E++ P 
Sbjct: 19  DAEVASHKLLVRAGYIR---RAAPGIYTWLPLGLKVLARVEAIVREEMNAIGAQEVHFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++Q+G W  Y   +F +K   D       + L P +      +      SY++L
Sbjct: 76  LLPREPYEQTGRWAEYGDGLFRLKDRKDA-----DYLLAPTHEEMFTLLVKDLYNSYKDL 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKD 417
           PV L +  + YR+E      GL+R R F   D++ F   ++  +E    H    + I++ 
Sbjct: 131 PVYLYQIQNKYRDEARPR-AGLLRGREFIMKDSYSFNIDDEGLDEAYMAHRGAYLKIFER 189

Query: 418 FGFEKIMVKLSTRPEKRVGSDAL 440
            G E + V           S+  
Sbjct: 190 LGLEVVPVFAQAGAMGGSKSEEF 212



 Score = 79.4 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 25/162 (15%), Positives = 64/162 (39%), Gaps = 11/162 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I Q+        N   ++ + ++    M    +   + R +  + E +     
Sbjct: 436 RGIEMGHIFQLGRKYAEALNLKVLDQNGKQTVVTMGSYGI--GVTRAVAALAEAYHDENG 493

Query: 548 L-WLSPI-----QAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSI 600
           L W   +       +VT      +E A+++A   ++    +  D R + +   K  +  +
Sbjct: 494 LAWPKQVAPADIHIVVTGKGPELLEAAEKLAGQFEAAGKEVILDDRPKVSAGVKFSDAEL 553

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             IP I++ G +  ++  + ++   +   + V++ + +  LT
Sbjct: 554 IGIPTIVVVG-RGLADGVVEVKDRATGERRDVNVENVVAELT 594


>gi|254776130|ref|ZP_05217646.1| prolyl-tRNA synthetase [Mycobacterium avium subsp. avium ATCC
           25291]
          Length = 582

 Score =  138 bits (347), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 54/359 (15%), Positives = 118/359 (32%), Gaps = 24/359 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +  +A    G+  W   G ++ + +   +R ++     +EI  P 
Sbjct: 19  DAEVPSHKLLIRAGYIRPVA---PGLYSWLPLGLRVLRRIEHIVREEMNAIGGQEILFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++ +  W  Y  ++F ++      +    + L P +             SY++ 
Sbjct: 76  LLPRAPYEATNRWTEYGDSVFRLQD-----RRGNDYLLGPTHEELFTLTVKGEYSSYKDF 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKD 417
           PV L +  + YR+E      G++RVR F   D++ F   +         H      I+  
Sbjct: 131 PVLLYQIQNKYRDEARPR-AGILRVREFVMKDSYSFDIDDAGLKAAYHAHREAYQRIFAR 189

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
                ++V   +       S+    ++       +  +++     +   +          
Sbjct: 190 LQVRYVIVSAVSGAMGGSASEEFLAESPVGEDTFVRCLESGYAANVEAVITARPDPQPVE 249

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
                +    G      T+ VD+   +        + + K   + + +   G     + I
Sbjct: 250 GLPEAVVHDTGDTPTIATL-VDWANRAGLGRTVTAADTLKNVLLKVRQP--GGEWELLAI 306

Query: 538 MI----ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIA-----NLLKSHHLSIETDFR 587
            +    E     L   L P    V    +    Y   +        LK + +    D R
Sbjct: 307 GLPGDREVDDKRLGAALEP-AEYVLLDDADFARYPFLVKGYIGPKALKDNGVRYLVDPR 364



 Score = 74.0 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 26/160 (16%), Positives = 61/160 (38%), Gaps = 11/160 (6%)

Query: 484 KDAIGRDWQCGTI---QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG-SIERFIGIMI 539
            D  G       I    +        +AF  +   E   PV +    +G  + R + ++ 
Sbjct: 409 PDGAGPLVSARGIEVAHIFQLGRKYTDAFTADVLGEDGKPVRLTMGSYGLGVSRMVAVIA 468

Query: 540 ENFKGNLPL-WLSPIQA-----IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           E     L L W + +       ++    + A   A  +A+ L    + +  D R  +   
Sbjct: 469 EQHHDELGLRWPASVAPFDVHLVIANKDAQARAGATALADDLDRLGVEVLLDDRQASPGV 528

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
           K ++  +  +P I++ G +  ++  + +R   +  T++++
Sbjct: 529 KFKDAELLGVPWIVVVG-RGWADGVVELRDRFAGQTRELA 567


>gi|260773310|ref|ZP_05882226.1| prolyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
 gi|260612449|gb|EEX37652.1| prolyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
          Length = 548

 Score =  137 bits (346), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 42/218 (19%), Positives = 84/218 (38%), Gaps = 8/218 (3%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYR 315
            I +  SG+  W   G ++ + + + +R++I      E   P V    LW+++G  +   
Sbjct: 6   MIRKLASGLYTWLPTGLRVLRKVENIVRQEIDNAGAIETLMPVVQPFELWEETGRSEKMG 65

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
             +        T +  R F L P       ++  + + SY++LP+ L +  + +R+E   
Sbjct: 66  PELLRF-----TDRHTRPFVLSPTAEEVITSLVRNEVSSYKQLPLNLYQIQTKFRDERRP 120

Query: 376 SLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              G+MR R F+  DA+ F    + +      +H+     +   G +   V   T     
Sbjct: 121 RF-GVMRAREFSMMDAYSFDIDKDGLEKSYQAMHDAYCKAFDRMGLDYRPVLADTGAIGG 179

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
            GS      AE+    +  + ++     I     +   
Sbjct: 180 NGSHEFHVLAESGEDIIAFSTESDYAANIEKAEAVAPA 217



 Score = 81.8 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 63/168 (37%), Gaps = 13/168 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           + R  + G I Q+  N   + N   ++S+ +     ++    +G  + R +   IE    
Sbjct: 380 LKRGIEVGHIFQLGTNYSEKMNCGVLDSNGK---HTILEMGCYGIGVSRVVASAIEQNHD 436

Query: 545 N----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                 P  L+P Q  +  +    +    + A+ +   L +  + +  D R E       
Sbjct: 437 KYGIIWPDALAPFQVAIVPMNMHKSERVQQAAETLYAELTAAGIEVLFDDRKERPGVMFS 496

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  +  IP  II GD+   E +   +   S     V + + +  + ++
Sbjct: 497 DMELIGIPHTIIIGDRSMDEGNFEYKHRRSGEKSAVPMANMVSFIHEQ 544


>gi|194364305|ref|YP_002026915.1| prolyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3]
 gi|226701341|sp|B4SJ64|SYP_STRM5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|194347109|gb|ACF50232.1| prolyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3]
          Length = 567

 Score =  137 bits (346), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 49/227 (21%), Positives = 88/227 (38%), Gaps = 14/227 (6%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  L        ++E   HR + R   +  +A   SG+  W   G ++ + +   +R +
Sbjct: 4   SQFHLHTTKETPSDAELTSHRLMLRAGMIRKLA---SGLYTWSPLGLRVLRKVERIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E   P +  + LW+Q+G W  +   +  +K   D     +TF   P       
Sbjct: 61  MDRAGAVEFQIPTIQPKELWEQTGRWQKFGPQLLKIKDRKD-----QTFCYSPTAEEAAC 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT-KEQMFNEC 404
                 L SY++LPV   +  + +R+E      G+MR R F   DA+ F    E +  E 
Sbjct: 116 DFARSELSSYKQLPVNFYQIQTKFRDEIRPRF-GVMRSREFLMKDAYSFHLHDECLVREY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALW---DDAENIM 448
             + +    I+   G +  MV+  +       S       D  E+ +
Sbjct: 175 ENMKSAYSRIFTRLGLDFRMVQADSGAIGGDASQEFHVIADSGEDAL 221



 Score = 81.0 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 23/164 (14%), Positives = 55/164 (33%), Gaps = 13/164 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN- 545
           R  + G + Q+        +A  ++ + +     ++    +G  I R +   IE    + 
Sbjct: 406 RGIEVGHVFQLGRTYARALDATVLDENGKA---AVMAMGCYGIGISRVVAAAIEQNHDDA 462

Query: 546 ---LPLWLSPIQAIVTTITSS----AVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
               P  ++P Q +V  I         + A  +   L+   L    D R         + 
Sbjct: 463 GIIWPDAMAPWQVVVCVINPKGDAAVADAATNLLQELRDAGLDAALDDRGLRPGAMFADM 522

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +  IP  ++  ++  +  +   R   ++  + +     +  L 
Sbjct: 523 ELIGIPHRVVVSERGLAAGTYEYRSRRASEAESLDKATLLQRLQ 566


>gi|42527791|ref|NP_972889.1| phosphoribulokinase/uridine kinase family protein [Treponema
           denticola ATCC 35405]
 gi|41818619|gb|AAS12808.1| phosphoribulokinase/uridine kinase family protein [Treponema
           denticola ATCC 35405]
          Length = 550

 Score =  137 bits (346), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 54/239 (22%), Positives = 105/239 (43%), Gaps = 4/239 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           +  K+TFPDG+ K F    +  ++ +    +     V + +N  V  L+  +  + +IE 
Sbjct: 2   ASFKITFPDGTQKEFVNPVSARELVQYF-PACPAPIVGIKVNNLVVPLNKTIDVQSNIEP 60

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +T  D       R +   I+A A + ++P +++ +G  ++ G+YY  + +   S  +   
Sbjct: 61  VTLADREGSNFYRRTLCLILAAAAKELYPGLRLLMGHSLDYGYYYTLEGKNS-SKVDFKA 119

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           I+ KM E++A+D P   ++LS+E+A E FE   +     +L +  +K  + + R G + D
Sbjct: 120 IKAKMDEMVAQDMPIDTRWLSYEEALEKFEHSNQPETHRLL-NYTSKPRILINRLGSYED 178

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           L   P +   G+VK F  +    G   R                    E+ +      +
Sbjct: 179 LYFQPLMDRIGEVKVFDVMPYEDGFLLRFPRTSSPTKLSEFKDIPHLFEIYKEYKQWGK 237


>gi|255030222|ref|ZP_05302173.1| prolyl-tRNA synthetase [Listeria monocytogenes LO28]
          Length = 505

 Score =  137 bits (346), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 46/184 (25%), Positives = 83/184 (45%), Gaps = 11/184 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E + H+ L R   +   A   SG+  +      + + + + +R +++     E+  P 
Sbjct: 17  DAEVKSHQLLLRAGFIRQTA---SGIYSYLPLATLMLRKIETIIREELEAIGAAELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W+ Y   +  +K      +  R FAL P +     A+    +KSY+ L
Sbjct: 74  LQPAELWQESGRWNDYGPELMRLKD-----RASRDFALGPTHEEVITALLRDEVKSYKRL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKD 417
           P+ L +  + +R+E      GL+R R F   DA+ F  T E +      +H    +I+  
Sbjct: 129 PLTLYQIQTKFRDEKRPRF-GLLRGREFIMKDAYSFHATSESLDEVYNLMHQAYSNIFTR 187

Query: 418 FGFE 421
            G E
Sbjct: 188 CGLE 191


>gi|114566427|ref|YP_753581.1| prolyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|122318501|sp|Q0AYJ4|SYP_SYNWW RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|114337362|gb|ABI68210.1| prolyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 570

 Score =  137 bits (346), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 50/224 (22%), Positives = 93/224 (41%), Gaps = 11/224 (4%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
                    E+E   H+ L R      I +  +GV  +     ++ + +++ +R ++   
Sbjct: 8   FPTLREVPSEAEVLSHQLLLRAG---FIRKATAGVYSYLPLANRVLKKIMNIVREEMDRA 64

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
             +E+  P +    LW++SG W+ Y   MF +K      +  R FAL P +      + +
Sbjct: 65  GGQEVILPIIQPAELWKKSGRWEVYGDEMFRLKD-----RHNRDFALGPTHEEIITTLVD 119

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIH 408
             + SYR LP+ L +  + YR+E      GLMR R F   D + F   E+  +    K++
Sbjct: 120 ADVHSYRHLPLLLYQIQNKYRDEIRPRF-GLMRGREFIMKDLYSFDIDEEGLDISYHKMY 178

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
                I++    +  +V+  +       S      AEN    ++
Sbjct: 179 EAYNRIFQRLKLQYRVVEADSGAIGGNESHEFMVLAENGEAEIV 222



 Score = 82.9 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 27/168 (16%), Positives = 62/168 (36%), Gaps = 11/168 (6%)

Query: 487 IGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
             R  + G I  +         A Y++   ++  P+++     G        + ++   N
Sbjct: 401 SMRGIEVGHIFKLGTKYSEVLEANYLDQKGQEK-PMVMGCYGIGISRTMAAAVEQSADEN 459

Query: 546 LPLWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
             +W    +P + I+  +       ++ A  +    K   L    D R+E    K ++  
Sbjct: 460 GIVWPLPITPFEVIIVPVNSKNEEQMQAAWSLYEEFKQEGLETIVDDRDERAGVKFKDAD 519

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA---IPILTKE 644
           +  IP+ I  G +   E+ + +++      + V L      + ++ KE
Sbjct: 520 LIGIPLRITIGPRSLQEKQVEVKKRSDKDIELVPLDAVSSRVKLMLKE 567


>gi|296117670|ref|ZP_06836254.1| proline--tRNA ligase [Corynebacterium ammoniagenes DSM 20306]
 gi|295969401|gb|EFG82642.1| proline--tRNA ligase [Corynebacterium ammoniagenes DSM 20306]
          Length = 585

 Score =  137 bits (346), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 55/321 (17%), Positives = 109/321 (33%), Gaps = 33/321 (10%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E   H+ L R   L        G+  W   G +  + +   +R ++     +E+  P 
Sbjct: 19  EAEVPSHKLLVRAGYLR---RAAPGIYSWLPLGLRTLRKIEDVVREEMNAIGGQELLFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++ +  W  Y  N+F +K      +      L P +             SY++ 
Sbjct: 76  LLPREPYELTDRWTEYGDNLFRLKD-----RKGADMLLGPTHEEMFAQTVKDLYSSYKDF 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKD 417
           PV L +  + YR+E      G++R R F   D++ F   ++  ++    H      I+  
Sbjct: 131 PVTLYQIQTKYRDEERPR-AGILRGREFIMKDSYSFDMSDEGLDKSYARHRKAYQKIFDR 189

Query: 418 FGFEKIMVKLSTRPE-----------KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
            G E  + + ++                VG D      +      ++ +       I+  
Sbjct: 190 LGIEYAICQATSGAMGGSASEEFLAVSEVGEDTFVRATDGDYAANVEAVVTPVPAEIDYS 249

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
            L     +  P  +    D +    +   I +D       +       + KC  V I + 
Sbjct: 250 NLPEAKEYDTP--DSETIDTLVEWARSEGITID-------DREVTAEDTLKCMMVKIAQP 300

Query: 527 VFGSIERFIGIMIENFKGNLP 547
             G      G++I   +   P
Sbjct: 301 --GEEPELAGVLIPGSRALAP 319



 Score = 84.4 bits (207), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 70/197 (35%), Gaps = 12/197 (6%)

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNS 513
           +      +I+  V   E     P  E      + R  + G I Q+       F+   ++ 
Sbjct: 388 LVAGRDFQIDEFVEASEVHEGDPAPEGQGTLTLKRGIELGHIFQLGRKYTQAFDVQILDE 447

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIMIENFKG----NLPLWLSPIQAIVTTIT--SSAVEY 567
           + ++  P M    +   + R + ++ E        N PL ++P Q  V        A + 
Sbjct: 448 NGKRAIPTMGSYGI--GVSRMMAVLAEQRHDEKGLNWPLDVAPYQVHVAVANKDEDATKA 505

Query: 568 AQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS 626
             E+   L    + +  D R + +   K ++  +  +P   I G +   +  I +R  G 
Sbjct: 506 GNELVEALDKAGVEVLFDDRPKVSPGVKFKDAELLGMPYCAILG-RSFKDGIIELRIRGG 564

Query: 627 TTTQKVSLLDAIPILTK 643
            T + V     +  L +
Sbjct: 565 ETLE-VPAESIVDELLQ 580


>gi|311744140|ref|ZP_07717946.1| proline--tRNA ligase [Aeromicrobium marinum DSM 15272]
 gi|311313270|gb|EFQ83181.1| proline--tRNA ligase [Aeromicrobium marinum DSM 15272]
          Length = 593

 Score =  137 bits (346), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 42/203 (20%), Positives = 84/203 (41%), Gaps = 11/203 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   HR L R   +  +A    G+  W   G K+   + + +R +++    +E+  P 
Sbjct: 17  DAEVPSHRLLVRAGYVRRVA---PGIYSWLPLGLKVLARVEAIVREEMEAIGAQEVRFPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++ S  W  Y  N+F +     T +      L P +      +      SY++L
Sbjct: 74  LLPREPYEASNRWTEYGPNLFRL-----TDRKGADLLLGPTHEELFTLLVKDLYGSYKDL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKD 417
           P+ + +  + YR+E      G++R R F   D++ F   +       + H    + I+  
Sbjct: 129 PLSIYQIQTKYRDEARPR-AGILRGREFIMKDSYSFDVDDAGLEASYQAHRAAYVRIFDR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDAL 440
            GFE ++V   +       S+  
Sbjct: 188 LGFEYVVVHADSGAMGGSASEEF 210



 Score = 82.5 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 24/163 (14%), Positives = 62/163 (38%), Gaps = 12/163 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G I Q+        +   ++ + +     M    V   + R +  ++E+   +  
Sbjct: 421 RGIEMGHIFQLGRKYAEVLDLKVLDENGKLVTVTMGSYGV--GVSRAVAAVVESSHDDLG 478

Query: 546 --LPLWLSPIQAIVTTITSSAVEY--AQEIANLLKSHHLSIETDFRNET--INYKIREHS 599
              P  L+P    +         +  A  + + L++  L +  D R     +  K ++  
Sbjct: 479 IVWPRALAPYDVHLIAAGKDEAVHLGAARLYDELRAAGLDVLFDDRPGKISLGVKFKDAE 538

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +  +P I++ G K  ++  + ++   +     V + D + +L+
Sbjct: 539 LLGMPTIVVVG-KGFADGVVEVKDRATGDRSDVPVDDLVELLS 580


>gi|319941771|ref|ZP_08016093.1| prolyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
 gi|319804704|gb|EFW01571.1| prolyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
          Length = 582

 Score =  137 bits (346), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 45/216 (20%), Positives = 86/216 (39%), Gaps = 10/216 (4%)

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLF--HIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
                +     +    D   ++++  +    I +  +GV  +   G ++ + + + +R +
Sbjct: 1   MRARSFFISTLKEAPADADVISQQYMIRSGMIKKLAAGVYTYMPLGLRVIRKIENIIRDE 60

Query: 287 I-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           + +    E+  P V    LWQ++G W+ Y   +  +K      + +R F L+P +     
Sbjct: 61  MVRAGSIELLMPMVQPAELWQETGRWEKYGPELLRIKD-----RHMRDFVLQPTSEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            V    +KS+R+LPV      + +R+E      G+MR R FT  DA+ F   E       
Sbjct: 116 DVARQEIKSWRQLPVNFFHIQTKFRDERRPRF-GVMRGREFTMKDAYSFDRDEAGAGLSY 174

Query: 406 -KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            K++     I+   G     V+  T       S   
Sbjct: 175 DKMYAAYQRIFTRIGLVFRAVRADTGSIGGSRSHEF 210



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 23/165 (13%), Positives = 59/165 (35%), Gaps = 14/165 (8%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE----NF 542
           R  + G +  +        +A +++ + +   P  +    +G  + R  G  IE    + 
Sbjct: 415 RGIEVGHVFFLGTRYSEPMHATFLDENGQ---PKPMQMGCYGIGVTRVAGAAIEQRHDDK 471

Query: 543 KGNLPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
               P  ++P + ++  +    +    + A  +   LK+  + +  D R+        E 
Sbjct: 472 GIQWPDAIAPFEVVICPMNYAKSEDVRKAADALYEDLKARGVDVILDDRDMRPGVMFAEW 531

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV-SLLDAIPILT 642
            +  +P  ++ GD+      I      +   + +  + DA   + 
Sbjct: 532 ELIGVPHRVVIGDRGLKNGEIEYAERTNLAEKTMVPVADAAAFIV 576


>gi|145353842|ref|XP_001421209.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144581446|gb|ABO99502.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 448

 Score =  137 bits (346), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 60/371 (16%), Positives = 135/371 (36%), Gaps = 59/371 (15%)

Query: 270 RKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHL-WQQSGHWDSYRANMFAVKCADDT 327
             G+ I++ +  YM  K K    +    PQ++      +++ H + +   +  V      
Sbjct: 5   PYGYAIWEGIQKYMDAKFKATGVQNAYFPQLIPYSFITKEASHVEGFAPELALVT-RGGG 63

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
            +      ++P +      + +  ++SYR+LP+ L ++ +V+R E        +R   F 
Sbjct: 64  KELEEPLVVRPTSETIVNNMLSQWIQSYRDLPMLLNQWCNVHRWEMR--TRPFIRTLEFL 121

Query: 388 QDDA-HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
             +      T E+     +++  +     +      ++    +R E   G          
Sbjct: 122 WQEGHTAHATAEEAEERAMQMIRVYAEFAQTQAAMPVIPGRKSRVESFAG---------- 171

Query: 447 IMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSR 505
                                     A      E ++ D   +  Q GT   +  N    
Sbjct: 172 --------------------------ANVTYTIEAMMGD--KKALQAGTSHNLGDNFAKA 203

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTI- 560
           F+  +++   E  +   +H++ +G   R IG ++     +    LP  L+PIQ +V  I 
Sbjct: 204 FDTTFLDDKGETQY---VHQSSWGVSTRLIGGILMTHGDDSGLILPPRLAPIQVVVVPIW 260

Query: 561 -----TSSAVEYAQEIANLLKSHHLSIETD-FRNETINYKIREHSIKKIPIIIICGDKEA 614
                  + +     I + L +  +    D  ++++  +K  ++ +K +PI I  G K+ 
Sbjct: 261 KKDEEKEAVMASVDSIISSLSNAGVRTHLDADQSKSPGWKFNQYEMKGVPIRIEVGPKDV 320

Query: 615 SERSIGIRRFG 625
           ++ +  + R  
Sbjct: 321 AKGACVVARRD 331


>gi|116669968|ref|YP_830901.1| prolyl-tRNA synthetase [Arthrobacter sp. FB24]
 gi|152074746|sp|A0JUT1|SYP_ARTS2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|116610077|gb|ABK02801.1| prolyl-tRNA synthetase [Arthrobacter sp. FB24]
          Length = 603

 Score =  137 bits (346), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 40/216 (18%), Positives = 83/216 (38%), Gaps = 11/216 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  L        ++E   HR L R   +        G+  W   G  + + +   +R +
Sbjct: 6   SKLFLRTLREDPADAEVASHRLLVRAGYIR---RAAPGIYTWLPLGLSVLRKVEKVIREE 62

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E++ P +L +  ++ +  W  Y   +F +K      +    + L P +     
Sbjct: 63  MAAIGAQEVHFPALLPKEPYEATNRWTEYGEGIFRLKD-----RKGGDYLLAPTHEEMFT 117

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +      SY++LP+ + +  + YR+E      GL+R R F   D++ F   +   +   
Sbjct: 118 LLVKDLYSSYKDLPLSIYQIQNKYRDEARPR-AGLLRGREFIMKDSYSFDVDDAGLDASY 176

Query: 406 KIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
             H    + I++  G E I V  +        S+  
Sbjct: 177 NAHRAAYLKIFERLGLEVIPVAATAGAMGGSRSEEF 212



 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 23/164 (14%), Positives = 63/164 (38%), Gaps = 13/164 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN- 545
           R  + G I Q+            ++ + ++   V++    +G  + R +  + E+     
Sbjct: 439 RGIEMGHIFQLGRKYAEALELKVLDQNGKQ---VVVTMGSYGVGVTRAVAALAESNHDAK 495

Query: 546 ---LPLWLSP--IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHS 599
               P  ++P  +  +           A++++  L++  L +  D R + +   K  +  
Sbjct: 496 GLVWPRAVAPADVHVVAVGRGEEIFAAAEQLSLELEAAGLEVIYDDRPKVSPGVKFGDAE 555

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  +P I+  G +   +  + I+   S   + V++  A+  +  
Sbjct: 556 LIGVPTILAVG-RGLVDGVVEIKDRRSGEAENVAVEKAVDYVVN 598


>gi|220912189|ref|YP_002487498.1| prolyl-tRNA synthetase [Arthrobacter chlorophenolicus A6]
 gi|219859067|gb|ACL39409.1| prolyl-tRNA synthetase [Arthrobacter chlorophenolicus A6]
          Length = 599

 Score =  137 bits (346), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 38/216 (17%), Positives = 83/216 (38%), Gaps = 11/216 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  L        ++E   H+ L R   +        G+  W   G  + + +   +R +
Sbjct: 2   SQLFLRTLREDPVDAEVASHKLLVRAGYIR---RAAPGIYTWLPLGLSVLRKVEQVIREE 58

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E++ P +L +  ++ +  W  Y   +F ++      +    + L P +     
Sbjct: 59  MAAIGAQEVHFPALLPREPYEATNRWTEYGEGLFRLQD-----RKGADYLLAPTHEEMFT 113

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +      SY++LP+ L +  + YR+E      GL+R R F   D++ F   +   +   
Sbjct: 114 LLVKDLYSSYKDLPLSLYQIQNKYRDEARPR-AGLLRGREFIMKDSYSFDVDDAGLDASY 172

Query: 406 KIHNL-IISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
             H    + I++  G + + V  +        S+  
Sbjct: 173 AAHRSAYLKIFERLGLDVVPVAATAGAMGGSRSEEF 208



 Score = 68.3 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 22/163 (13%), Positives = 61/163 (37%), Gaps = 11/163 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G I Q+     +  +   ++ + ++    M    V   + R +  + E       
Sbjct: 435 RGIEMGHIFQLGRKYAAALDLKVLDQNGKQVTVTMGSYGV--GVTRAVAALAEANHDAKG 492

Query: 546 --LPLWLSP--IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSI 600
              P  ++P  +  +           A++++  L++  L +  D R + +   K  +  +
Sbjct: 493 LTWPRAVAPADVHVVAVGKGEDIFAAAEQLSVGLEAAGLDVIYDDRFKVSPGVKFGDAEL 552

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             +P I+  G +   +  + I+   +   + V++  A+  +  
Sbjct: 553 LGVPTILAVG-RGLVDGVVEIKDRRTGEAENVAVDKAVDYVVN 594


>gi|20808685|ref|NP_623856.1| prolyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
 gi|81848077|sp|Q8R7S9|SYP_THETN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|20517322|gb|AAM25460.1| Prolyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
          Length = 573

 Score =  137 bits (346), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 42/216 (19%), Positives = 93/216 (43%), Gaps = 11/216 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  +        ++E   H  + +   +  +A    G+  +   G ++ + +   +R +
Sbjct: 4   SQLLMPTLREVPADAEIPSHVLMLKAGLMRKLAA---GIYVYLPLGKRVLKKVEEIVREE 60

Query: 287 I-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           + ++  +E+    ++   L++++G WD +   MF +K  ++     R F L P +     
Sbjct: 61  MDREGSQEVLMSALIPAELFKETGRWDVFGPEMFKLKDRNE-----RDFCLGPTHEEVFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +  + +KSYR+LP+ L +  + +R+E      G+MR R F   DA+ F    E +    
Sbjct: 116 DLVRNEVKSYRQLPLILYQIQTKFRDERRPRF-GVMRSREFIMKDAYSFDADWEGLDESF 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            K++     I+   G + ++V+          S   
Sbjct: 175 NKMYRAYCRIFDRCGLKYLVVEADPGAMGGRDSKEF 210



 Score = 74.8 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 26/141 (18%), Positives = 50/141 (35%), Gaps = 9/141 (6%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I  +         A Y +    +  P+++     G       I+ ++      
Sbjct: 404 RGIEVGHIFKLGTKYSEALGATYTDEEGNEK-PIVMGCYGIGINRTVAAIIEQHHDEKGI 462

Query: 548 LWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W    +P   IV  +        + A++I N L    L +  D R+     K  +  + 
Sbjct: 463 IWPMSVAPYHVIVVPVNVSDEEQKQIAEKIYNKLLEEKLEVLIDDRDVRAGVKFNDADLI 522

Query: 602 KIPIIIICGDKEASERSIGIR 622
            IP+ +  G K   E  + I+
Sbjct: 523 GIPVRVTIGKK-VKEGIVEIK 542


>gi|291457352|ref|ZP_06596742.1| proline--tRNA ligase [Bifidobacterium breve DSM 20213]
 gi|291381187|gb|EFE88705.1| proline--tRNA ligase [Bifidobacterium breve DSM 20213]
          Length = 597

 Score =  137 bits (346), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 51/282 (18%), Positives = 96/282 (34%), Gaps = 23/282 (8%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
           +I +   G+  W   G K+   +   +R +I     +E++ P +L +  ++ +  W+ Y 
Sbjct: 29  YIRKAAPGIWTWLPLGLKVLNKIEDIIREEINGIGAQEVHFPALLPREPYEATHRWEEYG 88

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            N+F +K      +    + L P +      +      SY++LPV L +  + YR+E   
Sbjct: 89  DNIFRLKD-----RHEADYLLAPTHEEMFTLLVKDMYSSYKDLPVTLYQIQTKYRDEFRP 143

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNE-CLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              GL+R R F   DA+ F   E+   +           I++    + + V   + P   
Sbjct: 144 R-AGLIRGREFIMKDAYSFTIDEEGMRKAYYDERGAYERIFQRLDLKYVPVFAMSGPMGG 202

Query: 435 VGSDALWD-------------DAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
             S+                   +      L T +    D  NT     E A      + 
Sbjct: 203 SASEEFLAPMPIGEDTFALAPSGKAWNVEALTTPELPEVDASNTPAASKEAAPDAKTIDN 262

Query: 482 ILK--DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
           +++  +A          Q    L +           E   P 
Sbjct: 263 MIERANADHPRTDGREWQASDILKNVVITVKHPEDEEHDEPW 304



 Score = 79.4 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 26/164 (15%), Positives = 60/164 (36%), Gaps = 12/164 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN- 545
           R  + G + Q+        +   ++ + +    V +    +G  + R +  + E      
Sbjct: 431 RGVEIGQVFQLGLKYSKALDLKVLDQNGKA---VPVWMGCYGIGVSRVLACIAETHHDEA 487

Query: 546 ---LPLWLSPIQAIVTTIT--SSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHS 599
               P  ++P    V        A E A+++   L++  L +  D R + +   K ++  
Sbjct: 488 GLAWPSVIAPAAVHVVATGKDEKAFEGAEKLVAELEAKGLEVIYDDRKKVSPGVKFKDAE 547

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  +P++ + G    ++ +I IR         V   +A   L  
Sbjct: 548 LIGVPLVAVVGRDYVNDGTIEIRDRNGENKVAVPAAEAAGTLAD 591


>gi|294786669|ref|ZP_06751923.1| proline--tRNA ligase [Parascardovia denticolens F0305]
 gi|294485502|gb|EFG33136.1| proline--tRNA ligase [Parascardovia denticolens F0305]
          Length = 601

 Score =  137 bits (346), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 38/163 (23%), Positives = 68/163 (41%), Gaps = 10/163 (6%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
              + L R   +  I   G G+  W   G K+   + + +R +I     +E++ P ++ +
Sbjct: 30  DSAKLLIRAGYIRKI---GPGLYSWLPLGLKVLNKIEAIIREEINALGAQEVHFPAMMPR 86

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             +Q S  W+ Y  N+F  K      +    + L P +      +      SY++LPV L
Sbjct: 87  EPYQMSNRWEEYGDNIFRFKD-----RHGADYLLAPTHEEMFTLMVKDMYTSYKDLPVTL 141

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    YR+E      G++R R F   DA+ F   E+   +  
Sbjct: 142 YQIQGKYRDEFRPR-AGMIRGRQFVMKDAYSFDIDEEGLKKSY 183



 Score = 83.3 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 27/162 (16%), Positives = 56/162 (34%), Gaps = 8/162 (4%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G + Q+            +N +  K  PV +     G       I   +      
Sbjct: 436 RGVEIGQVFQLGLKYSKAMGLNVLNQNG-KAVPVWMGCYGIGVSRVMSCIAEAHHDDKGL 494

Query: 548 LWL---SPIQAIVTTITSSAVEY--AQEIANLLKSHHLSIETDFRNE-TINYKIREHSIK 601
           +W    +P Q  +         Y  A+ +   L+   + +  D R + +   K ++  + 
Sbjct: 495 IWPLSVAPAQVHLIATGKDQKAYDLAESLLGDLEKADVEVLYDDRAKMSPGVKFKDSELL 554

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +P+I++ G    S+ ++ IR   +     V L  A   +  
Sbjct: 555 GLPMIVVVGRDTLSDGTVEIRNRATGEKDVVPLDQAAQAVQD 596


>gi|320160514|ref|YP_004173738.1| phosphoribulokinase/uridine kinase family protein [Anaerolinea
           thermophila UNI-1]
 gi|319994367|dbj|BAJ63138.1| phosphoribulokinase/uridine kinase family protein [Anaerolinea
           thermophila UNI-1]
          Length = 586

 Score =  137 bits (346), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 46/216 (21%), Positives = 99/216 (45%), Gaps = 3/216 (1%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIE 60
             ++ +  PDG + +           + +        V   +N ++ +LS  + RE  + 
Sbjct: 26  SDEVLIHLPDGRVLSGKRGTELEAFMQRLENWRDPLVVGAIVNRELRELSFKIWRESDVT 85

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDEL 119
            +T +D     + R S   ++  A +  +P+V + +   ++  G++      +P + +EL
Sbjct: 86  PVTLKDTDGARIYRRSLVFLLETAFEEQFPDVHLTVDHSVVSGGYFCQVRGREPLTVEEL 145

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +++++M+E++ +D  F +  +S ++A ELFE + ++ KV +L+  P  + V LY  G  
Sbjct: 146 KRLKQRMKELVRQDLRFERFVISKQEAIELFEQQNKSDKVRLLKYRPKDQLV-LYSLGHH 204

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRP 215
            D   G  V STG ++ F    +  G   +      
Sbjct: 205 KDYHHGYMVPSTGYLQWFDLKAQPGGFVLQFPRRHS 240


>gi|326201774|ref|ZP_08191645.1| AAA ATPase [Clostridium papyrosolvens DSM 2782]
 gi|325988374|gb|EGD49199.1| AAA ATPase [Clostridium papyrosolvens DSM 2782]
          Length = 552

 Score =  137 bits (346), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 54/257 (21%), Positives = 103/257 (40%), Gaps = 6/257 (2%)

Query: 1   MP-SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGS 58
           M  S I +T  +          T  +++E   +      VA  +N  + +LS  +  +  
Sbjct: 1   MSDSQIFITIKN-QKYELEDSTTLLELSERFKKEYLSTIVAARVNNDIKELSFRIKEDAE 59

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           I  I   D   + + R S   I   AV  ++P+ +  I   + +G Y + + E   + D+
Sbjct: 60  IGFIDLTDEDGMRIYRRSLYFIFIMAVHDVFPDRKAVITHPMSNGVYCEINGEDELTEDD 119

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           +  ++K+M+EI++   PF K+ +S E AR  ++   +  K E+LE    K  VT Y  G 
Sbjct: 120 IELVDKRMREIVSMKIPFEKKEISTESARRQYKDSGKLDKYEVLEH-RQKPYVTSYNCGG 178

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D   G  V  TG +  F       G   +  +          T    ++    ++ + 
Sbjct: 179 YEDYYYGYMVPDTGYINCFALKFHKPGVVIQYPAKTDPCKLQ--TFTEQKKLFNVFIEYK 236

Query: 239 EESEKRDHRKLAREMDL 255
           +     D   +    ++
Sbjct: 237 KWVRILDVENIGSLNEI 253


>gi|290893569|ref|ZP_06556552.1| prolyl-tRNA synthetase [Listeria monocytogenes FSL J2-071]
 gi|290556914|gb|EFD90445.1| prolyl-tRNA synthetase [Listeria monocytogenes FSL J2-071]
          Length = 568

 Score =  137 bits (346), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 46/184 (25%), Positives = 83/184 (45%), Gaps = 11/184 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E + H+ L R   +   A   SG+  +      + + + + +R +++     E+  P 
Sbjct: 17  DAEVKSHQLLLRAGFIRQTA---SGIYSYLPLATLMLRKIETIIREELEAIGAAELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W+ Y   +  +K      +  R FAL P +     A+    +KSY+ L
Sbjct: 74  LQPAELWQESGRWNDYGPELMRLKD-----RASRDFALGPTHEEVITALLRDEVKSYKRL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKD 417
           P+ L +  + +R+E      GL+R R F   DA+ F  T E +      +H    +I+  
Sbjct: 129 PLTLYQIQTKFRDEKRPRF-GLLRGREFIMKDAYSFHATSESLDEVYNLMHQAYSNIFTR 187

Query: 418 FGFE 421
            G E
Sbjct: 188 CGLE 191



 Score = 74.4 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 27/156 (17%), Positives = 58/156 (37%), Gaps = 7/156 (4%)

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW-- 549
           + G I       S+     +   + +  P+++     G       I  ++   N  +W  
Sbjct: 407 EVGHIFKLGTKYSQAMNATILDENGRAQPIIMGCYGIGVSRILSAIAEQSNDENGFVWDK 466

Query: 550 -LSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPI 605
            +SP    +  +   +   V +A+ +   L+    S+  D R E    K  +  +  +PI
Sbjct: 467 QISPFDLHLIPVNMKSEEQVAFAETLYTSLQGAGFSVLIDDRAERAGVKFADADLIGLPI 526

Query: 606 IIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            I  G K A+E  + ++   +    +V   + +  L
Sbjct: 527 RITVGKK-AAEGVVEVKIRKTGEMIEVRQDELLNTL 561


>gi|217964534|ref|YP_002350212.1| prolyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|254782905|sp|B8DG08|SYP_LISMH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|217333804|gb|ACK39598.1| prolyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|307570900|emb|CAR84079.1| proS [Listeria monocytogenes L99]
          Length = 568

 Score =  137 bits (346), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 46/184 (25%), Positives = 83/184 (45%), Gaps = 11/184 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E + H+ L R   +   A   SG+  +      + + + + +R +++     E+  P 
Sbjct: 17  DAEVKSHQLLLRAGFIRQTA---SGIYSYLPLATLMLRKIETIIREELEAIGAAELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W+ Y   +  +K      +  R FAL P +     A+    +KSY+ L
Sbjct: 74  LQPAELWQESGRWNDYGPELMRLKD-----RASRDFALGPTHEEVITALLRDEVKSYKRL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKD 417
           P+ L +  + +R+E      GL+R R F   DA+ F  T E +      +H    +I+  
Sbjct: 129 PLTLYQIQTKFRDEKRPRF-GLLRGREFIMKDAYSFHATSESLDEVYNLMHQAYSNIFTR 187

Query: 418 FGFE 421
            G E
Sbjct: 188 CGLE 191



 Score = 74.0 bits (180), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 27/156 (17%), Positives = 58/156 (37%), Gaps = 7/156 (4%)

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW-- 549
           + G I       S+     +   + +  P+++     G       I  ++   N  +W  
Sbjct: 407 EVGHIFKLGTKYSQAMNATILDENGRAQPIIMGCYGIGVSRILSAIAEQSNDENGFVWDK 466

Query: 550 -LSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPI 605
            +SP    +  +   +   V +A+ +   L+    S+  D R E    K  +  +  +PI
Sbjct: 467 QISPFDLHLIPVNMKSEEQVAFAETLYTSLQGAGFSVLIDDRAERAGVKFADADLIGLPI 526

Query: 606 IIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            I  G K A+E  + ++   +    +V   + +  L
Sbjct: 527 RITVGKK-AAEGVVEVKIRKTGEMIEVRQDELLNTL 561


>gi|13358015|ref|NP_078289.1| prolyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|170762025|ref|YP_001752537.1| prolyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           27815]
 gi|171920192|ref|ZP_02931576.1| prolyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC
           27813]
 gi|183508558|ref|ZP_02958076.1| prolyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC
           33697]
 gi|186701893|ref|ZP_02971547.1| prolyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC
           27818]
 gi|81858603|sp|Q9PQ38|SYP_UREPA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|259511629|sp|B1AJ93|SYP_UREP2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|11279770|pir||B82890 prolyl aminoacyl-tRNA synthetase UU452 [imported] - Ureaplasma
           urealyticum
 gi|6899444|gb|AAF30864.1|AE002141_10 prolyl aminoacyl-tRNA synthetase [Ureaplasma parvum serovar 3 str.
           ATCC 700970]
 gi|168827602|gb|ACA32864.1| prolyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           27815]
 gi|171902571|gb|EDT48860.1| prolyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC
           27813]
 gi|182676000|gb|EDT87905.1| prolyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC
           33697]
 gi|186701201|gb|EDU19483.1| prolyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC
           27818]
          Length = 472

 Score =  137 bits (346), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 74/401 (18%), Positives = 147/401 (36%), Gaps = 54/401 (13%)

Query: 261 DGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD-QHLWQQSGHWDSYRANM 318
           D  G++ +    W I++ + + +  + K      +  P ++      ++  H + +   +
Sbjct: 33  DIKGMMVFQPNAWAIWEAIKNQIDVEFKKHGVRNLAMPTLIPLSEFQKEKDHIEGFAPEL 92

Query: 319 FAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLH 378
           F V    D   D  ++A++P +       F + + SY +LP++  ++ SV R E   +  
Sbjct: 93  FMVNQIGDKKLDN-SYAIRPTSEILFCNYFKNIVNSYNDLPIKNNQWCSVMRAEK--TTR 149

Query: 379 GLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD 438
             +R   F   + H     E   +   K+   I+ +Y DF                    
Sbjct: 150 PFLRNAEFHWQELHAIFASENEADSFAKV---ILDVYTDF-------------------- 186

Query: 439 ALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
                       V + +       + T      GA      E +++D  G+  Q  T   
Sbjct: 187 ------------VQNYLCIPVIKGLKTPWERFAGAQKTYTIEAMMQD--GQALQSATSHY 232

Query: 499 -DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI---- 553
                   ++  +    ++  +   +H+   G   R IG +I     +  L L P     
Sbjct: 233 LGQFFAKAYDIKFQGQDNQMHY---VHQMSAGLSTRIIGALIMVHADDQGLILPPDIAFN 289

Query: 554 QAIVTTITSSAVEYAQEIANLLKS--HHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
           Q  + TI S+      +I+  +    ++  +  D  ++ I YK+ +  I+  PI I+ G 
Sbjct: 290 QIAILTIFSNKNPQLLKISQQICEQLNNYRLFEDHSDKGIGYKLAQQEIEGTPICILVGA 349

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           KE   + + I R  +     V L D   I+ K  L  D ++
Sbjct: 350 KELVNQQVVIVRRDTHEKINVDLTDLKLIIPK--LLADIKR 388


>gi|16803359|ref|NP_464844.1| prolyl-tRNA synthetase [Listeria monocytogenes EGD-e]
 gi|224501738|ref|ZP_03670045.1| prolyl-tRNA synthetase [Listeria monocytogenes FSL R2-561]
 gi|81849855|sp|Q8Y7G2|SYP_LISMO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|16410735|emb|CAC99397.1| prolyl-tRNA synthetase [Listeria monocytogenes EGD-e]
          Length = 568

 Score =  137 bits (346), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 46/184 (25%), Positives = 83/184 (45%), Gaps = 11/184 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E + H+ L R   +   A   SG+  +      + + + + +R +++     E+  P 
Sbjct: 17  DAEVKSHQLLLRAGFIRQTA---SGIYSYLPLATLMLRKIETIIREELEAIGAAELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W+ Y   +  +K      +  R FAL P +     A+    +KSY+ L
Sbjct: 74  LQPAELWQESGRWNDYGPELMRLKD-----RASRDFALGPTHEEVITALLRDEVKSYKRL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKD 417
           P+ L +  + +R+E      GL+R R F   DA+ F  T E +      +H    +I+  
Sbjct: 129 PLTLYQIQTKFRDEKRPRF-GLLRGREFIMKDAYSFHATSESLDEVYNLMHQAYSNIFTR 187

Query: 418 FGFE 421
            G E
Sbjct: 188 CGLE 191



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/218 (16%), Positives = 80/218 (36%), Gaps = 22/218 (10%)

Query: 444 AENIMKGVLDTIKNSSQDRINT-GVLLGEGAFYGPKFEYIL-------KDAIG-----RD 490
           A+N +K +++ +  +++D  +   V           F+  +        D  G       
Sbjct: 346 ADNAVKDIVNAVVGANEDGFHYINVNPDRDFSVTSYFDLRMIQVGDLSPDGQGVIKFAEG 405

Query: 491 WQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW 549
            + G I  +        NA  ++ +  +  P+++     G       I  ++   N  +W
Sbjct: 406 IEVGHIFKLGTKYSEAMNATILDENG-RAQPIIMGCYGIGVSRILSAIAEQSNDENGFVW 464

Query: 550 ---LSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
              +SP    +  +   +   V +A+ +   L+    S+  D R E    K  +  +  +
Sbjct: 465 DKQISPFDLHLIPVNMKSEEQVAFAETLYTSLQDAGFSVLIDDRAERAGVKFADADLIGL 524

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           PI I  G K A+E  + ++   +    +V   + +  L
Sbjct: 525 PIRITVGKK-AAEGVVEVKIRKTGEMIEVRQDELLNTL 561


>gi|315302972|ref|ZP_07873693.1| prolyl-tRNA synthetase [Listeria ivanovii FSL F6-596]
 gi|313628661|gb|EFR97073.1| prolyl-tRNA synthetase [Listeria ivanovii FSL F6-596]
          Length = 538

 Score =  137 bits (345), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 48/243 (19%), Positives = 91/243 (37%), Gaps = 25/243 (10%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E + H+ L R   +   A   SG+  +        + + + +R +++     E+  P 
Sbjct: 17  DAEVKSHQLLLRAGFIRQTA---SGIYSYLPLATLTLRKIEAIIREELEAVGAAELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W  Y   +  +K      +  R FAL P +     A+    +KSY+ L
Sbjct: 74  LQPAELWQESGRWSDYGPELMRLKD-----RAARDFALGPTHEEVITALLRDEIKSYKRL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+ L +  + +R+E      GL+R R F   DA+ F    +  +E   + +   S    F
Sbjct: 129 PLTLYQIQTKFRDEKRPRF-GLLRGREFIMKDAYSFHASNESLDEVYDLMHQAYS--NIF 185

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
               +  +        +G     +         L  I   +       +   + + Y   
Sbjct: 186 SRCGLEFRSVIADSGSIGGKETKEFM------ALSEIGEDT-------IAYSDASDYAAN 232

Query: 479 FEY 481
            E 
Sbjct: 233 VEM 235



 Score = 66.3 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 67/191 (35%), Gaps = 19/191 (9%)

Query: 444 AENIMKGVLDTIKNSSQDRINTG-VLLGEGAFYGPKFEYIL-------KDAIG-----RD 490
           A+N +K +++ +  +++D  +   V           F+  +        D  G       
Sbjct: 346 ADNAVKDIVNAVAGANEDGFHYVNVNPTRDFEVTSYFDLRMIQVGDLSPDGQGVIKFAEG 405

Query: 491 WQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW- 549
            + G I       S+     +   + +  P+++     G       I  ++   N  +W 
Sbjct: 406 IEVGHIFKLGTKYSQAMNATILDENGRAQPIIMGCYGIGVSRILSAIAEQSNDENGLVWD 465

Query: 550 --LSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             +SP    +  +   +   V +A+ +   L+    S+  D R E    K  +  +  +P
Sbjct: 466 KKISPFDLHLIPVNMKSEEQVAFAETLYVSLQQAGYSVLIDDRGERAGVKFADADLIGLP 525

Query: 605 IIIICGDKEAS 615
           + I  G K A 
Sbjct: 526 LRITVGKKAAE 536


>gi|294790672|ref|ZP_06755830.1| proline--tRNA ligase [Scardovia inopinata F0304]
 gi|294458569|gb|EFG26922.1| proline--tRNA ligase [Scardovia inopinata F0304]
          Length = 598

 Score =  137 bits (345), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 41/199 (20%), Positives = 78/199 (39%), Gaps = 11/199 (5%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
              + L R   +  I   G G+  W   G ++   + + +R +I     +E++ P ++ +
Sbjct: 26  DSAKLLIRAGYIRKI---GPGLYSWLPLGLRVLNKIEAIIREEINAIGAQEVHFPAMMPR 82

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             +Q S  W+ Y  N+F  K      +    + L P +      +      SY++LPV L
Sbjct: 83  EPYQMSNRWEEYGDNIFRFKD-----RHGADYLLAPTHEEMFTLMVKDMYTSYKDLPVTL 137

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFE 421
            +    YR+E      G++R R F   DA+ F   E+   +   +       I+      
Sbjct: 138 YQIQGKYRDEFRPR-AGMIRGRQFVMKDAYSFDIDEEGLKKAYLQERGAYERIFHRLDLN 196

Query: 422 KIMVKLSTRPEKRVGSDAL 440
            ++V   + P     S+  
Sbjct: 197 YVIVHAVSGPMGGSESEEF 215



 Score = 81.0 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 26/162 (16%), Positives = 58/162 (35%), Gaps = 8/162 (4%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G + Q+            +N + +   PV +     G       I   +      
Sbjct: 432 RGVEIGQVFQLGLKYSHAMGLKVLNKNGQAV-PVWMGCYGIGVSRVMSCIAETHHDDKGL 490

Query: 548 LWLS---PIQAIVTTIT--SSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIK 601
           +W +   P Q  +        A   A ++ + L+   + +  D R + +   K ++  + 
Sbjct: 491 IWPAAIAPAQVHLVATGKDDRAFHIADDLLHQLEGEGIEVLYDDRLKVSPGVKFKDSELL 550

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +P++++ G    +  ++ IR   S   Q V L  A   + +
Sbjct: 551 GMPLVLVVGRDAVNNGTVEIRNRRSGQVQIVPLEQAFHTVKE 592


>gi|229918663|ref|YP_002887309.1| prolyl-tRNA synthetase [Exiguobacterium sp. AT1b]
 gi|229470092|gb|ACQ71864.1| prolyl-tRNA synthetase [Exiguobacterium sp. AT1b]
          Length = 569

 Score =  137 bits (345), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 46/220 (20%), Positives = 90/220 (40%), Gaps = 11/220 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++E   H+ L R      I ++ +G+  +   G K+   + + +R +
Sbjct: 7   SRLLMPTLREVPADAEAVSHQLLVRGG---FIRQNAAGIYSYLPLGHKVLHNIQTIIREE 63

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E+  P +    LW+++G W  Y   +  +    D     R FAL   +     
Sbjct: 64  MNRAGAQELLMPAIQPAELWEETGRWGIYGPELMRLTDRHD-----RRFALGATHEELIT 118

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNEC 404
           ++    L SY++LP+ L +  + YR+E      GL+R R F   DA+ F  T+E +  E 
Sbjct: 119 SIVRDELNSYKKLPMNLYQIQTKYRDERRPRF-GLLRGREFLMKDAYSFHATQEDLDEEY 177

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
             ++N    I+   G +   V   +       +      A
Sbjct: 178 TNMYNAYSRIFDRTGLKYRPVVADSGAIGGKDTHEFQALA 217



 Score = 66.3 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 64/196 (32%), Gaps = 18/196 (9%)

Query: 462 RINTGVLLGEGAFYGPKFEYI---LKDAIGRDWQCGTIQVDFNLP------SRFNAFYVN 512
            +N    L E  ++  +F        D  G       I+V               A ++N
Sbjct: 370 GVNAARDLAEMTYHDLRFVVEGDLAPDESGPVRFARGIEVGQVFKLGTRYSEAMGATFLN 429

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL---SPIQAIVTTIT---SSAVE 566
               +  P+++     G       I+ ++      +W    +P    +  I     + VE
Sbjct: 430 EEG-RAEPLIMGCYGIGVSRTLSAIVEQHHDDRGIVWPRNVAPFDLHLIAINAKDETQVE 488

Query: 567 YAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS 626
            A  +   L      +  D R E    K  +  +  +PI +  G K A E  + ++   +
Sbjct: 489 LANRLYEEL-GQTYDVLFDDRKERAGVKFADADLIGLPIRVNVGKK-AGEGIVEVKVRAT 546

Query: 627 TTTQKVSLLDAIPILT 642
               + S+ +   ++ 
Sbjct: 547 GEVIETSIDELKEVIA 562


>gi|226313026|ref|YP_002772920.1| prolyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
 gi|254782888|sp|C0ZF57|SYP_BREBN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226095974|dbj|BAH44416.1| prolyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
          Length = 581

 Score =  137 bits (345), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 44/216 (20%), Positives = 88/216 (40%), Gaps = 11/216 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  +        ++E   H+ L R      +A   SG+  +     +    + + +R +
Sbjct: 4   SQMLIPTLREVPSDAEIASHKLLLRAGMARQLA---SGIYTYLPLALRSLHKIQAIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           + +   +E+  P +    LW Q+G WD Y   +  ++   D     R FAL P +     
Sbjct: 61  MNNAGGQELLMPAMQPAELWHQTGRWDVYGPELVRLRDRHD-----RPFALGPTHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
           ++    + SY++LP+ L +  + +R+E      GL+R R F   DA+ F T  + +    
Sbjct: 116 SLVRDEINSYKKLPINLYQIQTKFRDEVRPRF-GLIRCREFIMKDAYSFDTSQDGLDRNF 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
             +++   +I+   G     V+         G+   
Sbjct: 175 QAMYDAYTNIFTRVGLNFRAVEADAGAIGGKGTYEF 210



 Score = 92.5 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 63/162 (38%), Gaps = 10/162 (6%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G +  +     +   A Y++ +  +  P+++     G   R I  +IE       
Sbjct: 406 RGVEVGHVFKLGTKYSTAMGATYLDENG-RSQPMIMGCYGIGVS-RTIAAVIEQNNDENG 463

Query: 546 --LPLWLSPIQAIVTTITSSAVEY---AQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              P+ ++P    V  +     E    +++I   L+   + +  D R E    K ++  +
Sbjct: 464 IIWPVSVAPFHVHVIPVNVKVEEQRQASEQITEALRKAGIEVLFDDRPERAGVKFKDADL 523

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             +P+ I   DK A E ++ +R   +  T  V L   +  + 
Sbjct: 524 IGLPLRITVSDKAAQEGTVEVRIRKNGETHDVKLDQLVDEVK 565


>gi|47096944|ref|ZP_00234521.1| prolyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
 gi|47014704|gb|EAL05660.1| prolyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
          Length = 502

 Score =  137 bits (345), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 46/184 (25%), Positives = 83/184 (45%), Gaps = 11/184 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E + H+ L R   +   A   SG+  +      + + + + +R +++     E+  P 
Sbjct: 17  DAEVKSHQLLLRAGFIRQTA---SGIYSYLPLATLMLRKIETIIREELEAIGAAELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W+ Y   +  +K      +  R FAL P +     A+    +KSY+ L
Sbjct: 74  LQPAELWQESGRWNDYGPELMRLKD-----RASRDFALGPTHEEVITALLRDEVKSYKRL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKD 417
           P+ L +  + +R+E      GL+R R F   DA+ F  T E +      +H    +I+  
Sbjct: 129 PLTLYQIQTKFRDEKRPRF-GLLRGREFIMKDAYSFHATSESLDEVYNLMHQAYSNIFTR 187

Query: 418 FGFE 421
            G E
Sbjct: 188 CGLE 191


>gi|282861434|ref|ZP_06270499.1| prolyl-tRNA synthetase [Streptomyces sp. ACTE]
 gi|282564092|gb|EFB69629.1| prolyl-tRNA synthetase [Streptomyces sp. ACTE]
          Length = 566

 Score =  137 bits (345), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 58/323 (17%), Positives = 117/323 (36%), Gaps = 21/323 (6%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++E  +H+ L R   +   A    G+  W   G K+ + +   +R +
Sbjct: 8   SRLMIKTLRDDPADAETLNHKLLVRAGYVRRTAA---GLWSWLPLGKKVLENVSRVVREE 64

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E+  P +L +  ++ SG +D Y   +F ++      +    + L P +     
Sbjct: 65  MDAIGGQEVLLPALLPKEPYEASGRYDEYGDLLFRLRD-----RKGAEYLLGPTHEEIFT 119

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            V      SY++LPV L +  + YR+E       L R R F   D++ F T ++   E  
Sbjct: 120 QVVKDMCSSYKDLPVILYQIQTKYRDEARPRAGVL-RGREFQMKDSYSFDTTDEGLAESY 178

Query: 406 KIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA---ENIMKGVLDTIKNSSQD 461
           ++H    I I++  G +  +V   +       S+     A   E+      +    ++ +
Sbjct: 179 QLHRAAYIRIFERLGLDHRIVSAVSGAMGGSASEEFLAPAPAGEDTFVDCPNCDYAANTE 238

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
            +       E    GP  E    D      +     +     +      V    E     
Sbjct: 239 AVTYVATPAEAPAAGPVEELDTPDT--PTIESLADFLGVPASATLKNLLVKVDGE----- 291

Query: 522 MIHRAVFGSIERFIGIMIENFKG 544
           ++   V G  E  +G + E+   
Sbjct: 292 IVAVGVPGDREVDLGKLGEHLAP 314



 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 28/166 (16%), Positives = 67/166 (40%), Gaps = 12/166 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           + R  + G I Q+       F+   +    ++  PV +    +G  + R +  + E    
Sbjct: 404 VDRAIEIGHIFQLGRKYADIFSLDVL---GQQGKPVRVTMGSYGIGVSRAVAALAEQTAD 460

Query: 545 NLPL-WL---SPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREH 598
           +  L W    +P    V     +   E A +++  L +  L +  D R   +   K  + 
Sbjct: 461 DKGLCWPREVAPADVHVVAAGKALQTELALDVSEKLGAAGLRVIVDDRAGVSPGVKFTDS 520

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            +  +P I++ G + A    + ++   +   +++++ +A+  LT +
Sbjct: 521 ELIGVPKILVAGRRSAE-GVLELKDRRTGEREELTVDEALARLTDQ 565


>gi|262202081|ref|YP_003273289.1| prolyl-tRNA synthetase [Gordonia bronchialis DSM 43247]
 gi|262085428|gb|ACY21396.1| prolyl-tRNA synthetase [Gordonia bronchialis DSM 43247]
          Length = 576

 Score =  137 bits (345), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 41/234 (17%), Positives = 90/234 (38%), Gaps = 11/234 (4%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +        GV  W   G ++ + + + +R ++     +EI  P 
Sbjct: 15  DAEVPSHKLLVRGGYVR---RAAPGVYTWLPLGLRVLKAIENVVREEMDAIGAQEILLPA 71

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++ +G W  Y   +F +K      +      L P +      +      SY++L
Sbjct: 72  LLPRDPYETTGRWTEYGDALFRLKD-----RKGADMLLGPTHEELFANLVKGEYSSYKDL 126

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKD 417
           PV L +  + YR+E      G++R R F   DA+ F   +       + H      ++  
Sbjct: 127 PVILYQIQTKYRDEERPR-AGILRGREFVMKDAYSFDLDDDGLKVSYQAHREAYQRLFAR 185

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
            G + ++V  ++       S+    ++E      +  +++     +   +    
Sbjct: 186 LGVKYVIVAATSGAMGGSASEEFLAESEVGEDTFVRCLESGYAANVEAVITPAP 239



 Score = 82.1 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 34/169 (20%), Positives = 72/169 (42%), Gaps = 11/169 (6%)

Query: 484 KDAIGRDWQCGTIQVDF--NLPSRF-NAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMI 539
            D  G       I++     L  ++ +AF V+   E   PV +    +G  + R + ++ 
Sbjct: 404 PDGKGPLVSAKGIEIGHIFQLGQKYTDAFEVDVLGESGKPVRLTMGSYGVGVSRLVAVIA 463

Query: 540 ENFKGNLPL-WL---SPIQA--IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           E    +  L W    +P     ++     +AV  A E+A  L +  +S+  D R  +   
Sbjct: 464 EQCHDDKGLRWPREVAPFAVHLVIANKDDAAVTGAGELAEDLDAAGVSVLLDDRKASPGV 523

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           K ++  +  +P +++ G +  +  +I IR   +  T +V++  A+  + 
Sbjct: 524 KFKDAELLGMPTVVVVG-RGYANGTIEIRDRFTGETTEVAVDSAVDAIV 571


>gi|315226277|ref|ZP_07868065.1| proline--tRNA ligase [Parascardovia denticolens DSM 10105]
 gi|315120409|gb|EFT83541.1| proline--tRNA ligase [Parascardovia denticolens DSM 10105]
          Length = 590

 Score =  137 bits (345), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 38/163 (23%), Positives = 68/163 (41%), Gaps = 10/163 (6%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
              + L R   +  I   G G+  W   G K+   + + +R +I     +E++ P ++ +
Sbjct: 19  DSAKLLIRAGYIRKI---GPGLYSWLPLGLKVLNKIEAIIREEINALGAQEVHFPAMMPR 75

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             +Q S  W+ Y  N+F  K      +    + L P +      +      SY++LPV L
Sbjct: 76  EPYQMSNRWEEYGDNIFRFKD-----RHGADYLLAPTHEEMFTLMVKDMYTSYKDLPVTL 130

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    YR+E      G++R R F   DA+ F   E+   +  
Sbjct: 131 YQIQGKYRDEFRPR-AGMIRGRQFVMKDAYSFDIDEEGLKKSY 172



 Score = 82.9 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 27/162 (16%), Positives = 56/162 (34%), Gaps = 8/162 (4%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G + Q+            +N +  K  PV +     G       I   +      
Sbjct: 425 RGVEIGQVFQLGLKYSKAMGLNVLNQNG-KAVPVWMGCYGIGVSRVMSCIAEAHHDDKGL 483

Query: 548 LWL---SPIQAIVTTITSSAVEY--AQEIANLLKSHHLSIETDFRNE-TINYKIREHSIK 601
           +W    +P Q  +         Y  A+ +   L+   + +  D R + +   K ++  + 
Sbjct: 484 IWPLSVAPAQVHLIATGKDQKAYDLAESLLGDLEKADVEVLYDDRAKMSPGVKFKDSELL 543

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +P+I++ G    S+ ++ IR   +     V L  A   +  
Sbjct: 544 GLPMIVVVGRDTLSDGTVEIRNRATGEKDVVPLDQAAQAVQD 585


>gi|187251094|ref|YP_001875576.1| prolyl-tRNA synthetase [Elusimicrobium minutum Pei191]
 gi|226701286|sp|B2KCB2|SYP_ELUMP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|186971254|gb|ACC98239.1| Prolyl-tRNA synthetase [Elusimicrobium minutum Pei191]
          Length = 573

 Score =  137 bits (345), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 55/229 (24%), Positives = 92/229 (40%), Gaps = 10/229 (4%)

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLFH--IAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
            +LTQY     +   +D   ++ ++ L    I +  SG+  W   G K+ + +   +R +
Sbjct: 1   MKLTQYYLPTLKEAPKDADTISAKLMLRAGLIRKTASGIYEWLPLGLKVLKKVEQIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P +  + LW++SG W  Y   +  +K      +    F   P       
Sbjct: 61  MDAAGAHEVWLPLIQPKELWEESGRWTYYGKELLRIKD-----RKGAEFCFAPTAEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE-C 404
            V    + SY++LPV L +F S +R+E      G+MR R F   DA+ F   E+  NE  
Sbjct: 116 DVVRRDVTSYKQLPVALYQFASKFRDEIRPRF-GVMRAREFYMKDAYSFHATEESINEWY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
           LK       +    GF+   V+  T       S      A+     + D
Sbjct: 175 LKFFEAYKKVCTRCGFKFKAVEADTGAIGGNFSHEFMVLADTGENEIAD 223



 Score = 74.8 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 29/175 (16%), Positives = 61/175 (34%), Gaps = 13/175 (7%)

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           G KF +     +G  ++ GT           +       ++K HP ++     G      
Sbjct: 400 GKKFNFTRGIEVGHTFKLGTKYSQSMKAEFLD------ENQKSHPFLMGCYGIGISRIVA 453

Query: 536 GIMIENFKGNLPLWLSPIQA---IVTTITSSAVEYAQE----IANLLKSHHLSIETDFRN 588
             + ++   N  +W +P+      + +I +      +E    I N L    L++  D RN
Sbjct: 454 AAIEQSHDENGIIWPAPLAPFDIYLVSIDTDINPKVKEETDSIYNQLTQAGLNVLLDDRN 513

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           E    K ++  +  +P  I+   +         ++  S    +  L D    + +
Sbjct: 514 ERPGIKFKDADLIGLPHRIVISSRTVETGEYEYKQRTSKEAIRRKLADISEQIKE 568


>gi|254932366|ref|ZP_05265725.1| prolyl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|293583922|gb|EFF95954.1| prolyl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|328475041|gb|EGF45829.1| prolyl-tRNA synthetase [Listeria monocytogenes 220]
 gi|332311762|gb|EGJ24857.1| Prolyl-tRNA synthetase [Listeria monocytogenes str. Scott A]
          Length = 568

 Score =  137 bits (345), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 46/184 (25%), Positives = 83/184 (45%), Gaps = 11/184 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E + H+ L R   +   A   SG+  +      + + + + +R +++     E+  P 
Sbjct: 17  DAEVKSHQLLLRAGFIRQTA---SGIYSYLPLATLMLRKIETIIREELEAIGAAELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W+ Y   +  +K      +  R FAL P +     A+    +KSY+ L
Sbjct: 74  LQPAELWQESGRWNDYGPELMRLKD-----RASRDFALGPTHEEVITALLRDEVKSYKRL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKD 417
           P+ L +  + +R+E      GL+R R F   DA+ F  T E +      +H    +I+  
Sbjct: 129 PLTLYQIQTKFRDEKRPRF-GLLRGREFIMKDAYSFHATSESLDEVYNLMHQAYSNIFTR 187

Query: 418 FGFE 421
            G E
Sbjct: 188 CGLE 191



 Score = 75.6 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 36/218 (16%), Positives = 81/218 (37%), Gaps = 22/218 (10%)

Query: 444 AENIMKGVLDTIKNSSQDRINT-GVLLGEGAFYGPKFEYIL-------KDAIG-----RD 490
           A+N +K +++ +  +++D  +   V           F+  +        D  G       
Sbjct: 346 ADNAVKDIVNAVVGANEDGFHYINVNPDRDFSVTSYFDLRMIQVGDLSPDGQGVIKFAEG 405

Query: 491 WQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW 549
            + G I  +        NA  ++ +  +  P+++     G       I  ++   N  +W
Sbjct: 406 IEVGHIFKLGTKYSEAMNATILDENG-RAQPIIMGCYGIGVSRILSAIAEQSNDENGFVW 464

Query: 550 ---LSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
              +SP    +  +   +   V +A+ + + L+    S+  D R E    K  +  +  +
Sbjct: 465 DKQISPFDLHLIPVNVKSEEQVAFAETLYSSLQDAGFSVLIDDRAERAGVKFADADLIGL 524

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           PI I  G K A+E  + ++   +    +V   + +  L
Sbjct: 525 PIRITVGKK-AAEGVVEVKIRKTGEMIEVRQDELLNTL 561


>gi|117928726|ref|YP_873277.1| prolyl-tRNA synthetase [Acidothermus cellulolyticus 11B]
 gi|152074742|sp|A0LV31|SYP_ACIC1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|117649189|gb|ABK53291.1| prolyl-tRNA synthetase [Acidothermus cellulolyticus 11B]
          Length = 583

 Score =  137 bits (345), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 40/221 (18%), Positives = 86/221 (38%), Gaps = 11/221 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++E   HR L R   +  +A    G+  W   G+ + + +   +R++
Sbjct: 6   SKLFVRTLREDPADAEVPSHRLLVRAGYIRRVA---PGIYSWLPLGYAVLRKIEEIVRQE 62

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E++ P ++ + +++ SG W+ Y   +F +K      +    + L P +     
Sbjct: 63  MLHIGGQEVHFPALIPREIYEASGRWNEYGDTLFRLKD-----RKGADYLLGPTHEELFT 117

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +      SY++ PV L +  + YR+E      G++R R F   D++ F   +       
Sbjct: 118 LLVKGEYSSYKDYPVILFQIQTKYRDEARPR-AGILRGREFVMKDSYSFDLDDAGLAASY 176

Query: 406 KIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
             H      I+   G    +V   +       S+      E
Sbjct: 177 TAHREAYRRIFDRLGLRYRIVSAVSGAMGGSASEEFLAVTE 217



 Score = 86.8 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 33/159 (20%), Positives = 62/159 (38%), Gaps = 12/159 (7%)

Query: 492 QCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN---- 545
           + G I Q+       F    +        P+ I    +G  + R +  + E    +    
Sbjct: 423 EIGHIFQLGRKYTDAFELDALGPDG---RPIRITMGSYGIGVSRAVAAIAEQCHDDAGLI 479

Query: 546 LPLWLSPIQA-IVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIREHSIKKI 603
            P  +SP    +V        + A+E A  L +  L +  D R + +   K  +  +  I
Sbjct: 480 WPRSVSPADVHVVIAGKGEQEKLAEEFAAALDTAGLDVLLDDRVDASAGVKFADAELIGI 539

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           P I + G + A+   + +R  GS   ++++L DA+  L 
Sbjct: 540 PSIAVVG-RGAARGVVEVRDRGSGERRELALTDAVAELR 577


>gi|223044242|ref|ZP_03614279.1| prolyl-tRNA synthetase [Staphylococcus capitis SK14]
 gi|222442392|gb|EEE48500.1| prolyl-tRNA synthetase [Staphylococcus capitis SK14]
          Length = 567

 Score =  137 bits (345), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 52/243 (21%), Positives = 99/243 (40%), Gaps = 11/243 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        E+E   HR L +      I +  SG+  +     ++   + + +R +
Sbjct: 4   SKVFIPTMREVPAEAEALSHRLLLKAG---LIKQSTSGIYSYLPLATRVLNNISNIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++  D  EI  P +    LW++SG W +Y   +  +K      ++ R FAL P +     
Sbjct: 61  MESIDAVEILMPALQQAELWEESGRWGAYGPELMRLKD-----RNGREFALGPTHEEVVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           ++    LKSY+ LP+ L +  S YR+E      GL+R R F   DA+ F   E+  +   
Sbjct: 116 SLVRDELKSYKRLPLTLFQIQSKYRDEKRPRF-GLLRGREFIMKDAYSFHADEESLDATY 174

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
           + ++N    I+K  G     V   +       +      +E     ++ + ++     I 
Sbjct: 175 QDMYNAYSKIFKRVGINARPVVADSGAIGGNHTHEFMALSEIGEDTIVYSNESDYAANIE 234

Query: 465 TGV 467
              
Sbjct: 235 KAE 237



 Score = 68.7 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 62/174 (35%), Gaps = 15/174 (8%)

Query: 482 ILKDAIGRDWQCGTIQ------VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           +L D  G+      I+      +        NA ++++   K  P+++     G      
Sbjct: 391 MLSDGSGKAQFAEGIEVGQVFKLGTKYSEAMNATFLDNQG-KAQPLIMGCYGIGISRTLS 449

Query: 536 GIMIENFKGNLPLWLSPIQA------IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE 589
            I+ +N   N  +W   +         +        E   ++ + L      I  D R E
Sbjct: 450 AIVEQNNDDNGIIWPKSVTPFDLHLITINPKKDDQRELGDQLYDQLNGK-FDILYDDRKE 508

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
               K  +  +  +P+ ++ G + A E  + +++  S  ++++ + D    L  
Sbjct: 509 RAGVKFNDADLIGLPMRVVVGKR-AEEGIVEVKQRLSGESEEIHVNDLENYLKD 561


>gi|291004232|ref|ZP_06562205.1| prolyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
          Length = 581

 Score =  137 bits (345), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 55/362 (15%), Positives = 125/362 (34%), Gaps = 30/362 (8%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   HR L R   +  I   G G+  W   G ++ + +   +R+++     +EI+ P 
Sbjct: 19  DAEVPSHRLLVRAGYVRRI---GPGIYSWLPLGLRVLRNIEEIVRQEMDAIGAQEIHFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++ +  W  Y  N+F +K      +    + L P +             SY++ 
Sbjct: 76  LLPKEPYEATNRWTEYGPNLFRLKD-----RKGGDYLLGPTHEELFTLTVKGEYSSYKDY 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKD 417
           PV L +  + YR+E      G++R R F   D++ F   ++      ++H    I I+  
Sbjct: 131 PVILYQIQTKYRDEERPR-AGILRGREFVMKDSYSFDLDDEGLTNSYRLHRDAYIRIFDR 189

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDA----ENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
            G   ++V  ++       S+    +A    +  ++        + +  +          
Sbjct: 190 VGLRYVIVAATSGAMGGSASEEFLAEAPTGEDTFVRSTSSGFAANVEAVVTPVPEPEP-- 247

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
                 E      +       TI+   +  +        +     + ++  R        
Sbjct: 248 -----IEDKPAAQVHHTPDTPTIETLVDFLNAHGDRKFTAADTLKNVLVKTRQPGAREWE 302

Query: 534 FIGIMI----ENFKGNLPLWLSPIQAIVTTITS-SAVEYAQEIA---NLLKSHHLSIETD 585
            + + +    E     L   L P +  +   +  +A  +  +       L+ + +    D
Sbjct: 303 LLAVAVPGDREVDLKRLEASLEPAEVALLEESDFAANPFLVKGYIGPKALQDNGIRYLVD 362

Query: 586 FR 587
            R
Sbjct: 363 PR 364



 Score = 98.7 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 30/161 (18%), Positives = 62/161 (38%), Gaps = 10/161 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I Q+       F+   +    +     M    V   + R +  + E     L 
Sbjct: 419 RGIEIGHIFQLGRKYADAFSLDALGQDGKPKRITMGSYGV--GVSRMVAAIAEQSHDELG 476

Query: 548 L-WL---SP--IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           L W    +P  +  ++     S  E A+ +A  L +  + +  D RN +   K  +  + 
Sbjct: 477 LVWPREVAPADVHVVIAGKDESVREGAERLAADLDAAGVRVLLDDRNASPGVKFADAELV 536

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +P I++ G K  ++  + ++   S   ++V +  A+  L 
Sbjct: 537 GVPTILVVG-KGLAKGVVEVKDRRSGDREEVPVDGAVEHLV 576


>gi|254828679|ref|ZP_05233366.1| prolyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
 gi|254829924|ref|ZP_05234579.1| prolyl-tRNA synthetase [Listeria monocytogenes 10403S]
 gi|254898516|ref|ZP_05258440.1| prolyl-tRNA synthetase [Listeria monocytogenes J0161]
 gi|254911993|ref|ZP_05262005.1| prolyl-tRNA synthetase [Listeria monocytogenes J2818]
 gi|254936320|ref|ZP_05268017.1| prolyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|284801704|ref|YP_003413569.1| prolyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284994846|ref|YP_003416614.1| prolyl-tRNA synthetase [Listeria monocytogenes 08-5923]
 gi|258601083|gb|EEW14408.1| prolyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
 gi|258608910|gb|EEW21518.1| prolyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|284057266|gb|ADB68207.1| prolyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284060313|gb|ADB71252.1| prolyl-tRNA synthetase [Listeria monocytogenes 08-5923]
 gi|293589957|gb|EFF98291.1| prolyl-tRNA synthetase [Listeria monocytogenes J2818]
          Length = 568

 Score =  137 bits (345), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 46/184 (25%), Positives = 83/184 (45%), Gaps = 11/184 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E + H+ L R   +   A   SG+  +      + + + + +R +++     E+  P 
Sbjct: 17  DAEVKSHQLLLRAGFIRQTA---SGIYSYLPLATLMLRKIETIIREELEAIGAAELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W+ Y   +  +K      +  R FAL P +     A+    +KSY+ L
Sbjct: 74  LQPAELWQESGRWNDYGPELMRLKD-----RASRDFALGPTHEEVITALLRDEVKSYKRL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKD 417
           P+ L +  + +R+E      GL+R R F   DA+ F  T E +      +H    +I+  
Sbjct: 129 PLTLYQIQTKFRDEKRPRF-GLLRGREFIMKDAYSFHATSESLDEVYNLMHQAYSNIFTR 187

Query: 418 FGFE 421
            G E
Sbjct: 188 CGLE 191



 Score = 75.2 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 36/218 (16%), Positives = 80/218 (36%), Gaps = 22/218 (10%)

Query: 444 AENIMKGVLDTIKNSSQDRINT-GVLLGEGAFYGPKFEYIL-------KDAIG-----RD 490
           A+N +K +++ +  +++D  +   V           F+  +        D  G       
Sbjct: 346 ADNAVKDIVNAVVGANEDGFHYINVNPDRDFSVTSYFDLRMIQVGDLSPDGQGVIKFAEG 405

Query: 491 WQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW 549
            + G I  +        NA  ++ +  +  P+++     G       I  ++   N  +W
Sbjct: 406 IEVGHIFKLGTKYSEAMNATILDENG-RAQPIIMGCYGIGVSRILSAIAEQSNDENGFVW 464

Query: 550 ---LSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
              +SP    +  +   +   V +A+ +   L+    S+  D R E    K  +  +  +
Sbjct: 465 DKQISPFDLHLIPVNMKSEEQVAFAETLYTSLQDAGFSVLIDDRAERAGVKFADADLIGL 524

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           PI I  G K A+E  + ++   +    +V   + +  L
Sbjct: 525 PIRITVGKK-AAEGVVEVKIRKTGEMIEVRQDELLNTL 561


>gi|88798124|ref|ZP_01113711.1| prolyl-tRNA synthetase [Reinekea sp. MED297]
 gi|88779321|gb|EAR10509.1| prolyl-tRNA synthetase [Reinekea sp. MED297]
          Length = 573

 Score =  137 bits (345), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 44/246 (17%), Positives = 91/246 (36%), Gaps = 11/246 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  L        ++    H+ + R   +  +A   SG+  W   G ++   + + +R 
Sbjct: 3   ASRYLLATVKETPADAVIVSHKLMLRAGLVRKLA---SGLYNWLPTGRRVLNKIETIIRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +E+  P +    LW++SG  D     M  ++      +  R F   P +    
Sbjct: 60  ELDRSGAQEVLMPTIQPAELWEESGRIDKMEGQMLKMQD-----RHQRDFVYGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
             +  + L SY++LP+   +  + +R+E      G+MR R F   D + F    E +  E
Sbjct: 115 TDIARNELTSYKQLPMNFYQIQNKFRDEFRPRF-GVMRSREFVMKDGYSFHVDQECLNKE 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I+   G +   V   T       S      A++    ++ +  +S    I
Sbjct: 174 YDNMYQAYCRIFDRLGLDYRPVLADTGAMGGSASHEFQVLADSGEDYIVYSTDSSYAANI 233

Query: 464 NTGVLL 469
                 
Sbjct: 234 EQAEAP 239



 Score = 83.3 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 24/169 (14%), Positives = 68/169 (40%), Gaps = 15/169 (8%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGN 545
           +  + G I Q+         A  ++ + +      +    +G  + R +   IE N   N
Sbjct: 407 KGIEVGHIFQLGDTYSKSLKAEVLDQNGKSQA---MQMGCYGIGVTRIVAAAIEQNHDEN 463

Query: 546 LPLWL---SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNET--INYKIR 596
             +W    +P    +  +    +   +E A+++   L++    +  D R++      K  
Sbjct: 464 GIIWPDAIAPFHVGIVPLNAHKSPEVMEVAEKLYADLQAAGYDVLLDDRDKKTSPGVKFA 523

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           +  +  +P  I+  D+  ++  +  +   ++  ++++L D +  + ++S
Sbjct: 524 DMELVGVPHRIVVSDRGLADGKVEYKARRASDKEEIALTDILAHIQQQS 572


>gi|46907545|ref|YP_013934.1| prolyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|47093943|ref|ZP_00231680.1| prolyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
 gi|254824622|ref|ZP_05229623.1| prolyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
 gi|254852630|ref|ZP_05241978.1| prolyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|255522074|ref|ZP_05389311.1| prolyl-tRNA synthetase [Listeria monocytogenes FSL J1-175]
 gi|300765441|ref|ZP_07075423.1| prolyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
 gi|81830231|sp|Q720A3|SYP_LISMF RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|46880813|gb|AAT04111.1| prolyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|47017681|gb|EAL08477.1| prolyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
 gi|258605946|gb|EEW18554.1| prolyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|293593860|gb|EFG01621.1| prolyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
 gi|300513878|gb|EFK40943.1| prolyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
 gi|328468602|gb|EGF39602.1| prolyl-tRNA synthetase [Listeria monocytogenes 1816]
          Length = 568

 Score =  137 bits (345), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 46/184 (25%), Positives = 83/184 (45%), Gaps = 11/184 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E + H+ L R   +   A   SG+  +      + + + + +R +++     E+  P 
Sbjct: 17  DAEVKSHQLLLRAGFIRQTA---SGIYSYLPLATLMLRKIETIIREELEAIGAAELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W+ Y   +  +K      +  R FAL P +     A+    +KSY+ L
Sbjct: 74  LQPAELWQESGRWNDYGPELMRLKD-----RASRDFALGPTHEEVITALLRDEVKSYKRL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKD 417
           P+ L +  + +R+E      GL+R R F   DA+ F  T E +      +H    +I+  
Sbjct: 129 PLTLYQIQTKFRDEKRPRF-GLLRGREFIMKDAYSFHATSESLDEVYNLMHQAYSNIFTR 187

Query: 418 FGFE 421
            G E
Sbjct: 188 CGLE 191



 Score = 75.6 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 36/218 (16%), Positives = 81/218 (37%), Gaps = 22/218 (10%)

Query: 444 AENIMKGVLDTIKNSSQDRINT-GVLLGEGAFYGPKFEYIL-------KDAIG-----RD 490
           A+N +K +++ +  +++D  +   V           F+  +        D  G       
Sbjct: 346 ADNAVKDIVNAVVGANEDGFHYINVNPDRDFSVTSYFDLRMIQVGDLSPDGQGVIKFAEG 405

Query: 491 WQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW 549
            + G I  +        NA  ++ +  +  P+++     G       I  ++   N  +W
Sbjct: 406 IEVGHIFKLGTKYSEAMNATILDENG-RAQPIIMGCYGIGVSRILSAIAEQSNDENGFVW 464

Query: 550 ---LSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
              +SP    +  +   +   V +A+ + + L+    S+  D R E    K  +  +  +
Sbjct: 465 DKQISPFDLHLIPVNMKSEEQVAFAETLYSSLQDAGFSVLIDDRAERAGVKFADADLIGL 524

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           PI I  G K A+E  + ++   +    +V   + +  L
Sbjct: 525 PIRITVGKK-AAEGVVEVKIRKTGEMIEVRQDELLNTL 561


>gi|319401447|gb|EFV89657.1| prolyl-tRNA synthetase [Staphylococcus epidermidis FRI909]
          Length = 567

 Score =  137 bits (345), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 51/243 (20%), Positives = 97/243 (39%), Gaps = 11/243 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        E+E   HR L +      I +  SG+  +     ++   +   +R +
Sbjct: 4   SKVFIPTMREVPAEAEALSHRLLLKAG---LIKQSTSGIYSYLPLATRVLNNISKIIREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++  D  EI  P +    LW++SG W +Y   +  +K      ++ R FAL P +     
Sbjct: 61  MESIDAVEILMPALQQAELWEESGRWSAYGPELMRLKD-----RNGREFALGPTHEEVVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           ++    LKSY++LP+ L +  S YR+E      GL+R R F   DA+ F   E   +   
Sbjct: 116 SLVRDELKSYKQLPLTLFQIQSKYRDEKRPRF-GLLRGREFLMKDAYSFHFDEASLDATY 174

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
           + ++     I+K  G     V   +       +      +E     ++ + ++     I 
Sbjct: 175 QDMYQAYSRIFKRVGINARPVVADSGAIGGSHTHEFMALSEIGEDTIVYSNESDYAANIE 234

Query: 465 TGV 467
              
Sbjct: 235 KAE 237



 Score = 64.8 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 20/152 (13%), Positives = 54/152 (35%), Gaps = 9/152 (5%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQA-- 555
           +        NA ++++   K  P+++     G       I+ +N   N  +W   +    
Sbjct: 413 LGTKYSESMNATFLDNQG-KAQPLIMGCYGIGVSRTLSAIVEQNNDENGIIWPKSVTPFD 471

Query: 556 ----IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
                +            ++   L      +  D R E    K  +  +  +P+ ++ G 
Sbjct: 472 IHLITINPKKDDQRTLGDQLYQKLMDS-YDVLYDDRKERAGVKFNDSDLIGLPVRVVVGK 530

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           + A E  + +++  +  +++V + +    L +
Sbjct: 531 R-AEEGIVEVKQRINGLSEEVQVDELETYLQE 561


>gi|294647483|ref|ZP_06725066.1| phosphoribulokinase/uridine kinase family protein [Bacteroides
           ovatus SD CC 2a]
 gi|292637193|gb|EFF55628.1| phosphoribulokinase/uridine kinase family protein [Bacteroides
           ovatus SD CC 2a]
          Length = 554

 Score =  137 bits (345), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 41/202 (20%), Positives = 88/202 (43%), Gaps = 2/202 (0%)

Query: 15  KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVI 73
           K FP+ ++  D+    + +   + V+  +N +   L+  V     +E +   D   +   
Sbjct: 13  KEFPIGSSLLDIYYGFNLNFPYQVVSAKVNNRSEGLNFRVYNNKDVEFLDVRDQSGMRTY 72

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
             S   ++ +AV  ++P+ ++ +   +  G++ +    +P   +++ +I+++MQEIIA +
Sbjct: 73  VRSLCFVLFKAVTELFPDGKLFVEHPVSKGYFCNLRIGRPIELEDVTRIKQRMQEIIAEN 132

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQ 193
             + +      +A  +F  +    KV +LE+         Y  G+  D   G  + STG 
Sbjct: 133 ISYHRIECHTAEAVRVFSERGMNDKVRLLET-SGSLYTYYYTLGDTIDYYYGNLLPSTGY 191

Query: 194 VKKFFKLMKVAGAYWRGDSNRP 215
           +K F  +    G   R  S   
Sbjct: 192 LKLFDIVKYYDGLLLRIPSREN 213


>gi|224499901|ref|ZP_03668250.1| prolyl-tRNA synthetase [Listeria monocytogenes Finland 1988]
          Length = 568

 Score =  137 bits (345), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 46/184 (25%), Positives = 83/184 (45%), Gaps = 11/184 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E + H+ L R   +   A   SG+  +      + + + + +R +++     E+  P 
Sbjct: 17  DAEVKSHQLLLRAGFIRQTA---SGIYSYLPLATLMLRKIETIIREELEAIGAAELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W+ Y   +  +K      +  R FAL P +     A+    +KSY+ L
Sbjct: 74  LQPAELWQESGRWNDYGPELMRLKD-----RASRDFALGPTHEEVITALLRDEVKSYKRL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKD 417
           P+ L +  + +R+E      GL+R R F   DA+ F  T E +      +H    +I+  
Sbjct: 129 PLTLYQIQTKFRDEKRPRF-GLLRGREFIMKDAYSFHATSESLDEVYNLMHQAYSNIFTR 187

Query: 418 FGFE 421
            G E
Sbjct: 188 CGLE 191



 Score = 75.2 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 36/218 (16%), Positives = 80/218 (36%), Gaps = 22/218 (10%)

Query: 444 AENIMKGVLDTIKNSSQDRINT-GVLLGEGAFYGPKFEYIL-------KDAIG-----RD 490
           A+N +K +++ +  +++D  +   V           F+  +        D  G       
Sbjct: 346 ADNAVKDIVNAVVGANEDGFHYINVNPDRDFSVTSYFDLRMIQVGDLSPDGQGVIKFAEG 405

Query: 491 WQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW 549
            + G I  +        NA  ++ +  +  P+++     G       I  ++   N  +W
Sbjct: 406 IEVGHIFKLGTKYSEAMNATILDENG-RAQPIIMGCYGIGVSRILSAIAEQSNDENGFVW 464

Query: 550 ---LSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
              +SP    +  +   +   V +A+ +   L+    S+  D R E    K  +  +  +
Sbjct: 465 DKQISPFDLHLIPVNMKSEEQVAFAETLYTSLQDAGFSVLIDDRAERAGVKFADADLIGL 524

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           PI I  G K A+E  + ++   +    +V   + +  L
Sbjct: 525 PIRITVGKK-AAEGVVEVKIRKTGEMIEVRQDELLNTL 561


>gi|298252610|ref|ZP_06976404.1| prolyl-tRNA synthetase [Gardnerella vaginalis 5-1]
 gi|297532974|gb|EFH71858.1| prolyl-tRNA synthetase [Gardnerella vaginalis 5-1]
          Length = 603

 Score =  137 bits (345), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 49/290 (16%), Positives = 100/290 (34%), Gaps = 23/290 (7%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
           +I +   GV  W   G K+   + + +R +I     +E++ P +L +  ++ +  W+ Y 
Sbjct: 29  YIRKSAPGVWTWLPLGLKVLNKVQAIIRDEINGIGAQEVHFPALLPREPYEATNRWEEYG 88

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            N+F +K      +    + L P +      +      SY++LPV L +  + YR+E   
Sbjct: 89  DNIFRLKD-----RHQADYLLAPTHEEVFTLLVKDMYSSYKDLPVTLYQIQTKYRDEFRP 143

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              GL+R R F   DA+ F   E        +       I+   G + ++V   + P   
Sbjct: 144 R-AGLIRGREFIMQDAYSFSIDEDGLKSAYVEERAAYARIFDRLGIKYVIVHAVSGPMGG 202

Query: 435 VGSDAL----------WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP---KFE- 480
             S+            +  A +     ++ +       ++        +   P     E 
Sbjct: 203 SDSEEFLAPMPIGEDTFALAPSGKAWNVEALTTPEMQDVDYSATPAAQSLETPDAKTIEA 262

Query: 481 -YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG 529
              + + +         Q    L +   A    + +E        R +  
Sbjct: 263 LVKVSNDLHPRKDGREWQASDTLKNLIIAVKHPADAEGGEHEEPWREIVA 312



 Score = 95.6 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 62/163 (38%), Gaps = 12/163 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN- 545
           R  + G + Q+            +N + +    V +    +G  + R I  + E    + 
Sbjct: 436 RGVEIGQVFQLGLKYSKALGLSVLNENGKA---VPVWMGCYGIGVSRVIACLAETHHDDA 492

Query: 546 ---LPLWLSPIQAIVTTITSSAVEY--AQEIANLLKSHHLSIETDFRNE-TINYKIREHS 599
               P+ ++P Q  V       V +  A+++   L    + +  D R + +   K ++  
Sbjct: 493 GLAWPMAIAPAQVHVVATGKDQVAFDAAEKVVEELSKQGIEVIFDDRPKVSPGVKFKDAE 552

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +  +P+I + G    +  +I IR    +  + V + +A   + 
Sbjct: 553 LVGVPLIAVAGRDTVNNGTIEIRNRDGSNVEAVPVDEAAARIV 595


>gi|242373554|ref|ZP_04819128.1| prolyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
 gi|242348917|gb|EES40519.1| prolyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
          Length = 567

 Score =  137 bits (345), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 51/243 (20%), Positives = 97/243 (39%), Gaps = 11/243 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        E+E   HR L +      I +  SG+  +     ++   +   +R +
Sbjct: 4   SKVFIPTMREVPAEAEALSHRLLLKAG---LIKQSTSGIYSYLPLATRVLNNISKIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++  D  EI  P +    LW++SG W +Y   +  +K      ++ R FAL P +     
Sbjct: 61  MESIDAVEILMPALQQAELWEESGRWGAYGPELMRLKD-----RNGREFALGPTHEEVVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           ++    LKSY+ LP+ L +  S +R+E      GL+R R F   DA+ F   E   +   
Sbjct: 116 SLVRDELKSYKRLPLTLFQIQSKFRDEKRPRF-GLLRGREFIMKDAYSFHADEASLDATY 174

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
           + ++N    I+K  G     V   +       +      +E     ++ + ++     I 
Sbjct: 175 QDMYNAYSRIFKRVGINARPVVADSGAIGGNHTHEFMALSEIGEDTIVYSNESEYAANIE 234

Query: 465 TGV 467
              
Sbjct: 235 KAE 237



 Score = 67.5 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 22/151 (14%), Positives = 54/151 (35%), Gaps = 9/151 (5%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQA-- 555
           +        NA ++++   K  P+++     G       I+ +N   N  +W   +    
Sbjct: 413 LGTKYSEAMNATFLDNQG-KAQPLIMGCYGIGISRTLSAIVEQNNDENGIIWPKSVTPFE 471

Query: 556 ----IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
                +        E   ++ + L      +  D R E    K  +  +  +P+ ++ G 
Sbjct: 472 LHLITINPKKDEQRELGNQLYSQLNGR-YDVLYDDRQERAGVKFNDADLIGLPLRVVVGK 530

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           + A E  + +++  +  ++ V + D    L 
Sbjct: 531 R-AGEGIVEVKQRLNGESEDVHIDDLENYLK 560


>gi|314933442|ref|ZP_07840807.1| proline--tRNA ligase [Staphylococcus caprae C87]
 gi|313653592|gb|EFS17349.1| proline--tRNA ligase [Staphylococcus caprae C87]
          Length = 567

 Score =  137 bits (345), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 57/251 (22%), Positives = 102/251 (40%), Gaps = 15/251 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        E+E   HR L +      I +  SG+  +     ++   +   +R +
Sbjct: 4   SKVFIPTMREVPAEAEALSHRLLLKAG---LIKQSTSGIYSYLPLATRVLNNISKIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++  D  EI  P +    LW++SG W +Y   +  +K      ++ R FAL P +     
Sbjct: 61  MESIDAVEILMPALQQAELWEESGRWGAYGPELMRLKD-----RNGREFALGPTHEEVVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           ++    LKSY+ LP+ L +  S YR+E      GL+R R F   DA+ F   E+  +   
Sbjct: 116 SLVRDELKSYKRLPLTLFQIQSKYRDEKRPRF-GLLRGREFIMKDAYSFHADEESLDATY 174

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
           + ++N    I+K  G     V   +       +      +E       DTI  S++    
Sbjct: 175 QDMYNAYSRIFKRVGINARPVVADSGAIGGNHTHEFMALSEIGE----DTIVYSNESDYA 230

Query: 465 TGVLLGEGAFY 475
             +   E  +Y
Sbjct: 231 ANIEKAEVIYY 241



 Score = 71.0 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 25/174 (14%), Positives = 61/174 (35%), Gaps = 15/174 (8%)

Query: 482 ILKDAIGRDWQCGTIQ------VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           +L D  G+      I+      +        NA ++++   K  P+++     G      
Sbjct: 391 MLSDGSGKAQFAEGIEVGQVFKLGTKYSEAMNATFLDNQG-KAQPLIMGCYGIGISRTLS 449

Query: 536 GIMIENFKGNLPLWLSPIQA------IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE 589
            I+ +N   N  +W   +         +        E   ++   L      +  D R E
Sbjct: 450 AIVEQNNDENGIIWPKSVTPFDLHLITINPKKDDQRELGDQLYAQLNDK-FDVLYDDRKE 508

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
               K  +  +  +P+ ++ G + A E  + +++  +  ++++ + D    L  
Sbjct: 509 RAGVKFNDADLIGLPLRVVVGKR-AEEGVVEVKQRLNGESEEIHVNDLENYLKD 561


>gi|254730106|ref|ZP_05188684.1| prolyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
          Length = 213

 Score =  137 bits (345), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 45/207 (21%), Positives = 82/207 (39%), Gaps = 11/207 (5%)

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEI 294
              +E+E   HR + R   +    +  +G+  W   G K+   + + +R +       EI
Sbjct: 16  ENPKEAEIVSHRLMLRSGMIR---QQSAGIYSWLPIGLKVLNKVCTIIREEQNRAGANEI 72

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
             P +    LW++SG +D+Y   M  ++      +  R     P N      +F   ++S
Sbjct: 73  LMPTIQSADLWRESGRYDAYGKEMLRIQD-----RQKREMLFGPTNEEMVTDIFRSYVRS 127

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIIS 413
           Y++LP+ L      +R+E      G+MR R F   DA+ F    E       ++    + 
Sbjct: 128 YKDLPLNLYHIQWKFRDEVRPRF-GVMRSREFLMKDAYSFDLDYEGAKMAYYRMFVSYLR 186

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            +   G + I ++  T P     S   
Sbjct: 187 TFARVGLQAIPMRADTGPIGGDLSHEF 213


>gi|317129168|ref|YP_004095450.1| prolyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
 gi|315474116|gb|ADU30719.1| prolyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
          Length = 566

 Score =  137 bits (345), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 44/209 (21%), Positives = 86/209 (41%), Gaps = 11/209 (5%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
            ++E   H+ + R   +    +  SGV      G K  + + + +R ++     +E+  P
Sbjct: 16  SDAEVTSHQLMLRAGLIR---QSTSGVYSLLPLGLKALKKVEAIVREEMNRAGAQEMLMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW++SG W++Y   +  +       +  R FAL P +      V    +K+Y++
Sbjct: 73  AIQQSELWKESGRWEAYGPELMRLHD-----RHGREFALGPTHEEVITTVVRDDVKTYKK 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYK 416
           LP+ L +  + +R+E       L R R F   DA+ F T  E +     K++    +I+ 
Sbjct: 128 LPMTLYQIQTKFRDERRPRFGVL-RSREFLMKDAYSFDTSQEGLDESYNKMYEAYTNIFT 186

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
             G +   V   +       +      +E
Sbjct: 187 RCGLDFRAVVADSGAMGGKDTHEFMVLSE 215



 Score = 79.1 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 59/153 (38%), Gaps = 10/153 (6%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPI 553
           +         A Y++ + +   P+++     G   R +  +IE F        P  ++P 
Sbjct: 414 LGTRYSEAMGAMYLDENGKNK-PMIMGCYGIGVT-RTLAAIIEQFHDESGIIWPTSVTPF 471

Query: 554 QAIVTTITSSAVEY---AQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
              +  I     E    A+E+ N L    L +  D R E    K ++  +   P+ +  G
Sbjct: 472 DVHIVPINMKQEEQKQLAEELYNELTEERLEVLIDDRPERPGVKFKDADLYGFPVRVTVG 531

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            K A+E  + ++   +  T +V   D +  + +
Sbjct: 532 KK-ANEGVVELKVRKTGETLEVHKKDLLRTMKE 563


>gi|332670041|ref|YP_004453049.1| prolyl-tRNA synthetase [Cellulomonas fimi ATCC 484]
 gi|332339079|gb|AEE45662.1| prolyl-tRNA synthetase [Cellulomonas fimi ATCC 484]
          Length = 597

 Score =  137 bits (344), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 39/212 (18%), Positives = 84/212 (39%), Gaps = 11/212 (5%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
           +        ++E   H+ L R   +        G+  W   G ++   + + +R ++   
Sbjct: 10  VRTLREDPADAEVASHKLLVRAGYIR---RAAPGIYTWLPLGLRVLAKVEAVVREEMAAA 66

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
             +E++ P +L +  ++ +G W  Y  N+F +K      +    + L P +      +  
Sbjct: 67  GAQEVHFPALLPKEPYEATGRWTEYGPNIFRLKD-----RKGGDYLLAPTHEELFTLLVK 121

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
               SY++LP+ L +  + YR+E      GL+R R F   DA+ F   +   +       
Sbjct: 122 DLYSSYKDLPLTLFQIQTKYRDEARPR-AGLIRGREFVMKDAYSFDVDDAGLDASYAAQR 180

Query: 410 -LIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
                +++  G E ++V  ++       S+  
Sbjct: 181 AAYQRVFERLGLEYVIVSATSGAMGGSRSEEF 212



 Score = 85.2 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 24/162 (14%), Positives = 60/162 (37%), Gaps = 11/162 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE----NFK 543
           R  + G I Q+            ++ + +     M    +   + R +  + E    +  
Sbjct: 430 RGIEIGHIFQLGRKYAQALGLTVLDQNGKSQVVTMGSYGI--GVTRVLAALAEANHDDRG 487

Query: 544 GNLPLWLSPIQAIVTTITSSAV--EYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSI 600
              P  ++P    V      A   E A+++A  L +  + +  D R + +   K  +  +
Sbjct: 488 LAWPAHVAPAHVHVVATGKDASVFEAAEDVAAQLVARGVEVLYDDRPKVSPGVKFADAEL 547

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             +P++++ G +  +E  + +R        +V + D +  + 
Sbjct: 548 FGVPLVVVVG-RGLAEGLVEVRPRVGGEPVQVPVADVVEHVA 588


>gi|260757796|ref|ZP_05870144.1| prolyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
 gi|260668114|gb|EEX55054.1| prolyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
          Length = 210

 Score =  137 bits (344), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 45/207 (21%), Positives = 82/207 (39%), Gaps = 11/207 (5%)

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEI 294
              +E+E   HR + R   +    +  +G+  W   G K+   + + +R +       EI
Sbjct: 13  ENPKEAEIVSHRLMLRSGMIR---QQSAGIYSWLPIGLKVLNKVCTIIREEQNRAGANEI 69

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
             P +    LW++SG +D+Y   M  ++      +  R     P N      +F   ++S
Sbjct: 70  LMPTIQSADLWRESGRYDAYGKEMLRIQD-----RQKREMLFGPTNEEMVTDIFRSYVRS 124

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIIS 413
           Y++LP+ L      +R+E      G+MR R F   DA+ F    E       ++    + 
Sbjct: 125 YKDLPLNLYHIQWKFRDEVRPRF-GVMRSREFLMKDAYSFDLDYEGAKMAYYRMFVSYLR 183

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            +   G + I ++  T P     S   
Sbjct: 184 TFARVGLQAIPMRADTGPIGGDLSHEF 210


>gi|294339022|emb|CAZ87369.1| proline tRNA synthetase [Thiomonas sp. 3As]
          Length = 576

 Score =  137 bits (344), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 47/249 (18%), Positives = 91/249 (36%), Gaps = 12/249 (4%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLF----HIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +    +F+   +        R   L      I +  +G+  +   G +  + + + +R +
Sbjct: 1   MKISRFFISTQKDDPADADVRSQALMLRAGMIKKHAAGLYSYLPLGLRSIRKVEAIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P V    LWQ++G  D +   +  +K   D     R F ++P +     
Sbjct: 61  MNRAGAIELLMPVVQPAELWQETGRLDQFGPELLRIKDRHD-----RDFVIQPTSEEVVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +    ++S+R+LP+      + +R+E      G+MR R FT  DA+ F    E      
Sbjct: 116 DLVRSEVRSWRQLPLNFYHIQTKFRDERRPRF-GVMRAREFTMKDAYSFDRDFEAAQISY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
             + +  + I++ FGFE   V   +       S      A+     +     +     I 
Sbjct: 175 RVMFDAYVRIFQRFGFEFRAVAADSGAIGGSLSHEFHVIADTGEDAIAYCEGSDFAANIE 234

Query: 465 TGVLLGEGA 473
               L   A
Sbjct: 235 KAEALPLIA 243



 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 28/171 (16%), Positives = 58/171 (33%), Gaps = 12/171 (7%)

Query: 484 KDAIGRDWQCGTIQVDFNLP---SRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMI 539
            D  G    C  I+V            A       +K     +    +G  I R +G  I
Sbjct: 401 PDGKGVLSICRGIEVGHVFYLGTKYSAAMGATFLDDKGKSQTLEMGCYGIGITRILGACI 460

Query: 540 E-NFKGNLPLWL---SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           E N      +W    +P  A++  I    + +  + A  +   L +  + +  D R E  
Sbjct: 461 EQNHDAKGMIWPDAIAPFTAVICPIGYDRSEAVRQAADALYAELIAAGVDVALDDRGERP 520

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
              + +  +  +P  ++  D+  +  ++  +    +    + L +A   L 
Sbjct: 521 GVMLGDWELIGVPHRMVISDRGLAAGTVEYQHRRESAPTVLPLAEASAQLQ 571


>gi|296135005|ref|YP_003642247.1| prolyl-tRNA synthetase [Thiomonas intermedia K12]
 gi|295795127|gb|ADG29917.1| prolyl-tRNA synthetase [Thiomonas intermedia K12]
          Length = 576

 Score =  137 bits (344), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 47/249 (18%), Positives = 91/249 (36%), Gaps = 12/249 (4%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLF----HIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +    +F+   +        R   L      I +  +G+  +   G +  + + + +R +
Sbjct: 1   MKISRFFISTQKDDPADADVRSQALMLRAGMIKKHAAGLYSYLPLGLRSIRKVEAIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P V    LWQ++G  D +   +  +K   D     R F ++P +     
Sbjct: 61  MNRAGAIELLMPVVQPAELWQETGRLDQFGPELLRIKDRHD-----RDFVIQPTSEEVVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +    ++S+R+LP+      + +R+E      G+MR R FT  DA+ F    E      
Sbjct: 116 DLVRSEVRSWRQLPLNFYHIQTKFRDERRPRF-GVMRAREFTMKDAYSFDRDFEAAQISY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
             + +  + I++ FGFE   V   +       S      A+     +     +     I 
Sbjct: 175 RVMFDAYVRIFQRFGFEFRAVAADSGAIGGSLSHEFHVIADTGEDAIAYCEGSDFAANIE 234

Query: 465 TGVLLGEGA 473
               L   A
Sbjct: 235 KAEALPLIA 243



 Score = 74.4 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 58/171 (33%), Gaps = 12/171 (7%)

Query: 484 KDAIGRDWQCGTIQVDFNLP---SRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMI 539
            D  G    C  I+V            A       +K     +    +G  I R +G  I
Sbjct: 401 PDGKGVLSICRGIEVGHVFYLGTKYSAAMGATFLDDKGKSQTLEMGCYGIGITRILGACI 460

Query: 540 E-NFKGNLPLWL---SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           E N      +W    +P  A++  I    + +  + A  +   L +  + +  D R E  
Sbjct: 461 EQNHDAKGMIWPDAIAPFTAVICPIGYDRSEAVRQAADALYAELIAAGVDVALDDRGERP 520

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
              + +  +  +P  ++  D+  +  ++  +    +    + L DA   L 
Sbjct: 521 GVMLGDWELIGVPHRMVISDRGLAAGTVEYQHRRESAPTVLPLADACAQLQ 571


>gi|255031032|ref|ZP_05302983.1| threonyl-tRNA synthetase [Listeria monocytogenes LO28]
          Length = 160

 Score =  137 bits (344), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 71/161 (44%), Positives = 108/161 (67%), Gaps = 3/161 (1%)

Query: 139 QYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFF 198
           + +S E+A + F++  + YK+E++E+IP  E VT+Y QGE+FDLCRG HV STG+++ F 
Sbjct: 1   EVVSREEAIKRFKAIGDQYKLELIEAIPEDETVTIYTQGEFFDLCRGVHVPSTGKIQVF- 59

Query: 199 KLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI 258
           KL+ VAGAYWRGDSN  ML RIYGTA+  +  L +++   +E+++RDHRKL +E++LF  
Sbjct: 60  KLLSVAGAYWRGDSNNKMLQRIYGTAFFDKNGLKEFIQMQKEAKERDHRKLGKELELFTN 119

Query: 259 AEDGS-GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           + +   G+  W  KG  I + +  Y+  K +   Y  + TP
Sbjct: 120 SIEVGQGLPLWLPKGATIRRVIERYIVDKEERLGYNHVYTP 160


>gi|226223920|ref|YP_002758027.1| prolyl-tRNA synthetase [Listeria monocytogenes Clip81459]
 gi|259511604|sp|C1L2M5|SYP_LISMC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|225876382|emb|CAS05091.1| prolyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           CLIP 80459]
          Length = 568

 Score =  137 bits (344), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 46/184 (25%), Positives = 83/184 (45%), Gaps = 11/184 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E + H+ L R   +   A   SG+  +      + + + + +R +++     E+  P 
Sbjct: 17  DAEVKSHQLLLRAGFIRQTA---SGIYSYLPLATLMLRKIETIIREELEAIGAAELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W+ Y   +  +K      +  R FAL P +     A+    +KSY+ L
Sbjct: 74  LQPAELWQESGRWNDYGPELMRLKD-----RASRDFALGPTHEEVITALLRDEVKSYKRL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKD 417
           P+ L +  + +R+E      GL+R R F   DA+ F  T E +      +H    +I+  
Sbjct: 129 PLTLYQIQTKFRDEKRPRF-GLLRGREFIMKDAYSFHATSESLDEVYNLMHQAYSNIFTR 187

Query: 418 FGFE 421
            G E
Sbjct: 188 CGLE 191



 Score = 75.2 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 26/150 (17%), Positives = 58/150 (38%), Gaps = 8/150 (5%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW---LSPIQ 554
           +        NA  ++ +  +  P+++     G       I  ++   N  +W   +SP  
Sbjct: 414 LGTKYSEAMNATILDENG-RAQPIIMGCYGIGVSRILSAIAEQSNDENGFVWDKQISPFD 472

Query: 555 AIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
             +  +   +   V +A+ + + L+    S+  D R E    K  +  +  +PI I  G 
Sbjct: 473 LHLIPVNMKSEEQVAFAETLYSSLQDAGFSVLIDDRAERAGVKFADADLIGLPIRITVGK 532

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           K A+E  + ++   +    +V   + +  L
Sbjct: 533 K-AAEGVVEVKIRKTGEMIEVRQDELLNTL 561


>gi|134102383|ref|YP_001108044.1| prolyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
 gi|133915006|emb|CAM05119.1| prolyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
          Length = 574

 Score =  137 bits (344), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 55/362 (15%), Positives = 125/362 (34%), Gaps = 30/362 (8%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   HR L R   +  I   G G+  W   G ++ + +   +R+++     +EI+ P 
Sbjct: 12  DAEVPSHRLLVRAGYVRRI---GPGIYSWLPLGLRVLRNIEEIVRQEMDAIGAQEIHFPA 68

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++ +  W  Y  N+F +K      +    + L P +             SY++ 
Sbjct: 69  LLPKEPYEATNRWTEYGPNLFRLKD-----RKGGDYLLGPTHEELFTLTVKGEYSSYKDY 123

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKD 417
           PV L +  + YR+E      G++R R F   D++ F   ++      ++H    I I+  
Sbjct: 124 PVILYQIQTKYRDEERPR-AGILRGREFVMKDSYSFDLDDEGLTNSYRLHRDAYIRIFDR 182

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDA----ENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
            G   ++V  ++       S+    +A    +  ++        + +  +          
Sbjct: 183 VGLRYVIVAATSGAMGGSASEEFLAEAPTGEDTFVRSTSSGFAANVEAVVTPVPEPEP-- 240

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
                 E      +       TI+   +  +        +     + ++  R        
Sbjct: 241 -----IEDKPAAQVHHTPDTPTIETLVDFLNAHGDRKFTAADTLKNVLVKTRQPGAREWE 295

Query: 534 FIGIMI----ENFKGNLPLWLSPIQAIVTTITS-SAVEYAQEIA---NLLKSHHLSIETD 585
            + + +    E     L   L P +  +   +  +A  +  +       L+ + +    D
Sbjct: 296 LLAVAVPGDREVDLKRLEASLEPAEVALLEESDFAANPFLVKGYIGPKALQDNGIRYLVD 355

Query: 586 FR 587
            R
Sbjct: 356 PR 357



 Score = 98.7 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 30/161 (18%), Positives = 62/161 (38%), Gaps = 10/161 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I Q+       F+   +    +     M    V   + R +  + E     L 
Sbjct: 412 RGIEIGHIFQLGRKYADAFSLDALGQDGKPKRITMGSYGV--GVSRMVAAIAEQSHDELG 469

Query: 548 L-WL---SP--IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           L W    +P  +  ++     S  E A+ +A  L +  + +  D RN +   K  +  + 
Sbjct: 470 LVWPREVAPADVHVVIAGKDESVREGAERLAADLDAAGVRVLLDDRNASPGVKFADAELV 529

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +P I++ G K  ++  + ++   S   ++V +  A+  L 
Sbjct: 530 GVPTILVVG-KGLAKGVVEVKDRRSGDREEVPVDGAVEHLV 569


>gi|320593705|gb|EFX06114.1| prolyl-tRNA synthetase [Grosmannia clavigera kw1407]
          Length = 495

 Score =  137 bits (344), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 67/430 (15%), Positives = 139/430 (32%), Gaps = 40/430 (9%)

Query: 203 VAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDG 262
           ++G     D    +           Q  L           +  H KL R        +  
Sbjct: 33  ISGRQLHVDHRNRLTQF---WVPPPQVALKDAKQN-----EESHAKLVRAG---FFRQAH 81

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SGV      G ++   + + + + ++      +    +    LW++SG   S +  +F  
Sbjct: 82  SGVFHMLPLGLRVQDKIEALVDKHMRSIGASRVALSSITSAGLWERSGRLGSVKPELFQF 141

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           +      +    F L P +      +    + SYR+LP+RL +    YR+E     +G++
Sbjct: 142 ED-----RKQAKFLLAPTHEEEITELVAQSVHSYRDLPLRLYQITRKYRDEMRPR-YGIL 195

Query: 382 RVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           R R F   D + F T  E       ++     +I+ +      + + S+       S   
Sbjct: 196 RSREFIMKDLYTFDTTVEAALATYEQVRAAYAAIFAELRVPVRVARASSGDMGGDLSHEY 255

Query: 441 WDDA---ENIMKG--VLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGT 495
              A   E+ +          N+    I             P         + R  + G 
Sbjct: 256 HLAASLGEDDVASCRACGFAGNTEITHIGPDSRPARSGDDCPDCGAAGSLQVERAIELGH 315

Query: 496 -IQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI----ERFIGIMIENFKG----NL 546
              +        N       +      +    + G       R +G + ++         
Sbjct: 316 TFYLGTRYSEPLNVRVQGDQNTPATSTI--TPLMGCYGIGISRILGAVADHLADPTGLRW 373

Query: 547 PLWLSPIQAIVTTITSSAV-EYAQEIANLLKSH---HLSIETDFRN-ETINYKIREHSIK 601
           P  ++P +  V     S + + A+ + + L ++    L    D R   ++ YK+++  + 
Sbjct: 374 PRAIAPFEVAVVAAGGSPLAQVAERVYDELTANTETRLDALLDDRPAASLPYKLKDADLT 433

Query: 602 KIPIIIICGD 611
             P+++I G 
Sbjct: 434 GYPVVVIVGA 443


>gi|254992869|ref|ZP_05275059.1| prolyl-tRNA synthetase [Listeria monocytogenes FSL J2-064]
          Length = 568

 Score =  137 bits (344), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 46/184 (25%), Positives = 83/184 (45%), Gaps = 11/184 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E + H+ L R   +   A   SG+  +      + + + + +R +++     E+  P 
Sbjct: 17  DAEVKSHQLLLRAGFIRQTA---SGIYSYLPLATLMLRKIETIIREELEAIGAAELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W+ Y   +  +K      +  R FAL P +     A+    +KSY+ L
Sbjct: 74  LQPAELWQESGRWNDYGPELMRLKD-----RASRDFALGPTHEEVITALLRDEVKSYKRL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKD 417
           P+ L +  + +R+E      GL+R R F   DA+ F  T E +      +H    +I+  
Sbjct: 129 PLTLYQIQTKFRDEKRPRF-GLLRGREFIMKDAYSFHATSESLDEVYNLMHQAYSNIFTR 187

Query: 418 FGFE 421
            G E
Sbjct: 188 CGLE 191



 Score = 75.2 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 26/150 (17%), Positives = 58/150 (38%), Gaps = 8/150 (5%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW---LSPIQ 554
           +        NA  ++ +  +  P+++     G       I  ++   N  +W   +SP  
Sbjct: 414 LGTKYSEAMNATILDENG-RAQPIIMGCYGIGVSRILSAIAEQSNDENGFVWDKQISPFD 472

Query: 555 AIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
             +  +   +   V +A+ + + L+    S+  D R E    K  +  +  +PI I  G 
Sbjct: 473 LHLIPVNMKSEEQVAFAETLYSSLQDAGFSVLIDDRAERAGVKFADADLIGLPIRITVGK 532

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           K A+E  + ++   +    +V   + +  L
Sbjct: 533 K-AAEGVVEVKIRKTGEMIEVRQDELLNTL 561


>gi|303236847|ref|ZP_07323426.1| phosphoribulokinase/uridine kinase family protein [Prevotella
           disiens FB035-09AN]
 gi|302483015|gb|EFL46031.1| phosphoribulokinase/uridine kinase family protein [Prevotella
           disiens FB035-09AN]
          Length = 553

 Score =  137 bits (344), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 44/242 (18%), Positives = 97/242 (40%), Gaps = 3/242 (1%)

Query: 1   MPSDIKLTFPDGSI-KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGS 58
           M   +++   +     + P+ ++  DV  + +  +    V+  +N KV  L+  V     
Sbjct: 1   MKQVLQIRCKNNKKTLDVPIGSSLYDVYSAFNLKMEYGPVSAKVNNKVEGLNYRVFHNKD 60

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           +E +       +     S   ++ +AV  ++P+ +V I   + +G+Y + +  +  + D+
Sbjct: 61  VEFLDLHSSSGVRTYTRSLFMVLCKAVHDLYPKSKVIIDIPVSNGYYCNLNIGREVTEDD 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           + +I K MQ II    P  +   + E A ++F    +  KV++LES         Y+  +
Sbjct: 121 VNKIRKCMQSIIDAQKPISRFETTTEDAIKMFRKLGDEAKVKLLES-TGSLYTFYYKLDD 179

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D   G  + +T  +K F       G   R                +   E+ +  +  
Sbjct: 180 YVDYYYGSMLTNTSLIKLFGVEKFFDGLLLRIPDTDNPGKLSENINQDKMFEVFKIHHRW 239

Query: 239 EE 240
           ++
Sbjct: 240 QQ 241


>gi|325474977|gb|EGC78163.1| hypothetical protein HMPREF9353_01010 [Treponema denticola F0402]
          Length = 301

 Score =  137 bits (344), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 52/205 (25%), Positives = 102/205 (49%), Gaps = 4/205 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           +  K+TFPDG+ K F    +  ++ + +  +L    V + +N  V  L+  +  + +IE 
Sbjct: 2   ASFKITFPDGTQKEFVHPVSARELIQYL-PALPSPIVGIKVNNLVVPLNKTIDVQSNIEP 60

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +T  D       R +   I+A A + ++P++++ +G  ++ G+YY  + +      +   
Sbjct: 61  VTLADREGSNFYRRTLCLILAAAAKELYPDLRLLMGHSLDYGYYYTLEGKNSGKV-DFKA 119

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           I+ KM E++A+D P   ++LS+E+A E FE   +     +L +  +K  + + R G + D
Sbjct: 120 IKAKMDEMVAQDMPIDTRWLSYEEALEKFEHSNQPETHRLL-NYTSKPRILINRLGNYED 178

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGA 206
           L   P +   G+VK F  +    G 
Sbjct: 179 LYFQPLMDRIGEVKVFDVMPYEDGF 203


>gi|315180910|gb|ADT87824.1| prolyl-tRNA synthetase [Vibrio furnissii NCTC 11218]
          Length = 546

 Score =  137 bits (344), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 43/210 (20%), Positives = 85/210 (40%), Gaps = 8/210 (3%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
            I +  SG+  W   G ++ + + + +R++I      E   P V    LW+++G  +   
Sbjct: 6   MIRKLASGLYTWLPTGLRVLRKVENIVRQEIDRAGAIETLMPVVQPFELWEETGRSEKMG 65

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
             +        T + +R F L P       A+  + + SY++LP+ L +  + +R+E   
Sbjct: 66  PELLRF-----TDRHVRPFVLSPTAEEVITALVRNEVSSYKQLPLNLYQIQTKFRDERRP 120

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              G+MR R F+  DA+ F   +Q   +    +H      +   G +   V   +     
Sbjct: 121 RF-GVMRAREFSMMDAYSFDLDKQGLQKSYDAMHAAYCKAFDRMGLDYRPVLADSGAIGG 179

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            GS      AE+    ++ + ++     I 
Sbjct: 180 NGSQEFHVLAESGEDLIVFSTESDYAANIE 209



 Score = 91.8 bits (226), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 24/168 (14%), Positives = 61/168 (36%), Gaps = 13/168 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           + R  + G I Q+  N   + N   +    +    V++    +G  + R +   IE    
Sbjct: 380 LKRGIEVGHIFQLGTNYSEKMNCSVLGPDGKN---VILEMGCYGIGVSRVVAAAIEQNND 436

Query: 545 N----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                 P  ++P Q  +  +    +    + A+++   L +  + +  D R E       
Sbjct: 437 KYGIIWPDAIAPFQVAIVPMNMHKSERVQQAAEKLYAELSAAGIDVLFDDRKERPGVMFS 496

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  +  +P  I+ GD+   E +   +   +     +++   +  +  +
Sbjct: 497 DMELIGVPHTIVIGDRSMDEGNFEYKNRRNGEKTAIAIDQIVEHIKAQ 544


>gi|313816766|gb|EFS54480.1| prolyl-tRNA synthetase [Propionibacterium acnes HL059PA1]
          Length = 581

 Score =  137 bits (344), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 48/220 (21%), Positives = 91/220 (41%), Gaps = 11/220 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  +        ++E   HR L R   +  +A    GV  W   G ++ + + +  R +
Sbjct: 2   SQLFVRTLREAPADAEVPSHRWLVRAGYIRRVA---PGVYSWLPLGLRVMRRIEAICREE 58

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E++ P +L    ++++G W  Y  N+F +K      +      L P +     
Sbjct: 59  MASIGAQEVSFPALLASDPYKETGRWVEYGDNLFRLKD-----RKGVDMLLGPTHEEMFT 113

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +      SY+ LP+ L +  + YR+E      G++R R F   DA+ F   ++  +E  
Sbjct: 114 LMVKDLYSSYKALPLCLYQIQNKYRDEARPR-AGILRGREFVMMDAYSFDVAQEGLDEAY 172

Query: 406 KIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
           +      I I+   GF+  +VK  + P     S+     A
Sbjct: 173 QAQRDAYIRIFNRLGFDYAIVKAMSGPMGGSRSEEFLAVA 212



 Score = 74.4 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 59/162 (36%), Gaps = 8/162 (4%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I Q+            ++ + +    V +     G       I          
Sbjct: 419 RGIEIGHIFQLGKKYADALGLKVLDHNGKLVT-VTMGSYGLGVSRAVAAIAEGTCDEKGL 477

Query: 548 LWL---SP--IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            W    +P  +Q + T   +  ++ A  IA+ L    L +  D R  +   K  +  I  
Sbjct: 478 CWPREVAPYDVQVLATGKGTEILDEATRIASELAEAGLEVLLDDRKASPGVKFADSEILG 537

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P  ++ G +   +  + +R   +   ++VS+ +A+  + KE
Sbjct: 538 MPTSVVVG-RGLKDGLVEVRDRSTGENRQVSVAEAVCAVLKE 578


>gi|160946442|ref|ZP_02093651.1| hypothetical protein PEPMIC_00402 [Parvimonas micra ATCC 33270]
 gi|158447558|gb|EDP24553.1| hypothetical protein PEPMIC_00402 [Parvimonas micra ATCC 33270]
          Length = 567

 Score =  137 bits (344), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 40/198 (20%), Positives = 85/198 (42%), Gaps = 11/198 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
            +  +       +E+E   H+ L R   +    +  +G+  +   G++  + + + +R +
Sbjct: 4   KRYYMPTLREDPQEAEIISHKLLLRAGMIR---KSAAGIYSYLPLGYRTIRKVENIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      EI    +  + +W++SG W ++   MF VK  ++     R F L P       
Sbjct: 61  MDRMGGYEILMSALQPKEIWEESGRWQTFGPEMFKVKDRNE-----REFCLGPTAEEYFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNEC 404
            + +  +KSY++LP+ + +  + YR+E      G+ R R F+  DA+ F  + E M    
Sbjct: 116 TLISGEIKSYKQLPLNIYQIQTKYRDEKRPRF-GINRAREFSMKDAYTFDVSPEMMMESY 174

Query: 405 LKIHNLIISIYKDFGFEK 422
            ++      ++   G   
Sbjct: 175 KEMWKAYEKVFNRLGLNY 192



 Score = 82.1 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 37/163 (22%), Positives = 67/163 (41%), Gaps = 9/163 (5%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I Q+        NA +++ +    +  M    + G       I+ +N      
Sbjct: 402 RGIEVGNIFQLGTKYSKALNATFLDENGVSQYFWMGSHGI-GITRSITAIIEQNNDEKGI 460

Query: 548 LWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W    +P  AIVT +       ++  ++I + L++  + +  D R E I  K  +  + 
Sbjct: 461 IWPIQVAPYHAIVTVVNINDEEQMKLGEKIHDELEAQGVEVMLDDRKERIGVKFNDRDLI 520

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            IP+ I  G K A+E  I           ++S  DAI I+ +E
Sbjct: 521 GIPLRITVGKK-ANENIIEFSTRREMENVEMSSEDAINIVVEE 562


>gi|260771311|ref|ZP_05880237.1| prolyl-tRNA synthetase [Vibrio furnissii CIP 102972]
 gi|260613627|gb|EEX38820.1| prolyl-tRNA synthetase [Vibrio furnissii CIP 102972]
          Length = 541

 Score =  137 bits (344), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 43/210 (20%), Positives = 85/210 (40%), Gaps = 8/210 (3%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
            I +  SG+  W   G ++ + + + +R++I      E   P V    LW+++G  +   
Sbjct: 1   MIRKLASGLYTWLPTGLRVLRKVENIVRQEIDRAGAIETLMPVVQPFELWEETGRSEKMG 60

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
             +        T + +R F L P       A+  + + SY++LP+ L +  + +R+E   
Sbjct: 61  PELLRF-----TDRHVRPFVLSPTAEEVITALVRNEVSSYKQLPLNLYQIQTKFRDERRP 115

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              G+MR R F+  DA+ F   +Q   +    +H      +   G +   V   +     
Sbjct: 116 RF-GVMRAREFSMMDAYSFDLDKQGLQKSYDAMHAAYCKAFDRMGLDYRPVLADSGAIGG 174

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            GS      AE+    ++ + ++     I 
Sbjct: 175 NGSQEFHVLAESGEDLIVFSTESDYAANIE 204



 Score = 91.4 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 24/168 (14%), Positives = 61/168 (36%), Gaps = 13/168 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           + R  + G I Q+  N   + N   +    +    V++    +G  + R +   IE    
Sbjct: 375 LKRGIEVGHIFQLGTNYSEKMNCSVLGPDGKN---VILEMGCYGIGVSRVVAAAIEQNND 431

Query: 545 N----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                 P  ++P Q  +  +    +    + A+++   L +  + +  D R E       
Sbjct: 432 KYGIIWPDAIAPFQVAIVPMNMHKSERVQQAAEKLYAELSAAGIDVLFDDRKERPGVMFS 491

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  +  +P  I+ GD+   E +   +   +     +++   +  +  +
Sbjct: 492 DMELIGVPHTIVIGDRSMDEGNFEYKNRRNGEKTAIAIDQIVEHIKAQ 539


>gi|269956006|ref|YP_003325795.1| prolyl-tRNA synthetase [Xylanimonas cellulosilytica DSM 15894]
 gi|269304687|gb|ACZ30237.1| prolyl-tRNA synthetase [Xylanimonas cellulosilytica DSM 15894]
          Length = 607

 Score =  137 bits (344), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 40/212 (18%), Positives = 85/212 (40%), Gaps = 11/212 (5%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
           +        ++E   HR L R   +        G+  W   G ++   + + +R ++   
Sbjct: 18  VRTLREDPADAEVASHRLLIRAGYIR---RAAPGIYTWLPLGLRVLAKVEAIVREEMAAI 74

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
             +E++ P +L +  ++ +G W+ Y  N+F ++           + L P +      +  
Sbjct: 75  GGQEVHFPALLPREPYEATGRWEEYGPNLFRLQDRKRA-----DYLLAPTHEEMFTLLVK 129

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
               SY++LP+ L +  + YR+E      GL+R R F   D++ F   +   +E  + H 
Sbjct: 130 DLYSSYKDLPLTLFQIQTKYRDEARPR-AGLIRGREFVMKDSYSFDHTDAGLDEAYQRHR 188

Query: 410 -LIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
                I+   G + ++V   +       S+  
Sbjct: 189 DAYERIFTRLGLDYVIVSAMSGAMGGSRSEEF 220



 Score = 47.5 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 18/119 (15%), Positives = 39/119 (32%), Gaps = 10/119 (8%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNL 546
           R  + G I Q+            ++ + +     M    +   + R +  + E N     
Sbjct: 442 RGIEMGHIFQLGRKYAEALGLKVLDENGKAVTVTMGSYGI--GVTRALAALAEANHDERG 499

Query: 547 PLWL---SPIQAIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHS 599
             W    +P    V      +   + A E+A  L ++ + +  D R + +   K  +  
Sbjct: 500 LAWPAHVAPAHVHVVATGRGAEVFDAAAELAEGLVANGVEVVYDDRPKVSPGVKFADAE 558


>gi|228992547|ref|ZP_04152474.1| Prolyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
 gi|228998595|ref|ZP_04158182.1| Prolyl-tRNA synthetase [Bacillus mycoides Rock3-17]
 gi|228761063|gb|EEM10022.1| Prolyl-tRNA synthetase [Bacillus mycoides Rock3-17]
 gi|228767181|gb|EEM15817.1| Prolyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
          Length = 566

 Score =  137 bits (344), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 46/203 (22%), Positives = 88/203 (43%), Gaps = 11/203 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R +++     E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPLGLKVLHKVERIVREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K  +D     R FAL   +      +    +KSY++L
Sbjct: 74  LQAAELWQESGRWYSYGSELMRMKDRND-----REFALGATHEEVITDLVRDEIKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKD 417
           P+ L +  + +R+E      GL+R R F   DA+ F  T+E +      ++    +I+  
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEVYSGLYQAYSNIFAR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDAL 440
            G     V   +       +   
Sbjct: 188 CGLNFRAVIADSGAMGGKDTHEF 210



 Score = 76.7 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 60/157 (38%), Gaps = 11/157 (7%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G +  +        NA +++ +  K  P+++     G   R +  + E F     
Sbjct: 404 RGIEVGHVFKLGTRYSEAMNATFLDENG-KTKPLIMGCYGIGVS-RTVAAVAEQFNDENG 461

Query: 546 --LPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              P  ++P    V  +   + +  E  + I N L+     +  D R E    K  +  +
Sbjct: 462 LVWPKAVAPFHVHVIPVNMKSDAQREVGETIYNSLQEQGYEVLLDDRAERAGVKFADADL 521

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
             +P+ +  G K A E  + ++   +  + +V + + 
Sbjct: 522 FGLPVRVTVGKK-ADEGIVEVKVRATNESAEVKVEEL 557


>gi|257055068|ref|YP_003132900.1| prolyl-tRNA synthetase [Saccharomonospora viridis DSM 43017]
 gi|256584940|gb|ACU96073.1| prolyl-tRNA synthetase, family II [Saccharomonospora viridis DSM
           43017]
          Length = 586

 Score =  137 bits (344), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 59/361 (16%), Positives = 136/361 (37%), Gaps = 27/361 (7%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +  +A    G   W   G ++ + + + +R ++     +EI  P 
Sbjct: 19  DAEVPSHKLLVRAGYVRRVA---PGGYSWLPLGLRVLRNVEAIVREEMDAIGAQEIQFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++ +G W  Y  ++F +       +    + L P +             SY++ 
Sbjct: 76  LLPKEPYETTGRWTEYGPSLFRLVD-----RKGADYLLGPTHEELFALTVKGEYSSYKDY 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH-NLIISIYKD 417
           PV L +  + YR+E      G++R R F   D++ F   ++      ++H N  + I+  
Sbjct: 131 PVILYQIQTKYRDEARPR-AGILRGREFIMKDSYSFDLDDEGLARSYELHRNAYLRIFDR 189

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
            G + ++V  ++       S+     AE      + + ++     +   V         P
Sbjct: 190 LGLDYVVVAATSGAMGGSASEEFLAVAETGEDTYVRSTESEYAANVEAVVTPAP-----P 244

Query: 478 KFEYILKDAIGRDWQ--CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER-F 534
           +     K A    +     TI+   +  +  +     + ++    V++   + G  +   
Sbjct: 245 EQSVEDKPAAQVHYTPNTPTIETLVDFLNAADLGRTFTAADTLKNVLVKTRMPGEEDWKL 304

Query: 535 IGIMI----ENFKGNLPLWLSPIQAIVTTITS-SAVEYAQEIA---NLLKSHHLSIETDF 586
           +GI +    E     L   L+P +  +   +  +A  +  +       L+++ +    D 
Sbjct: 305 LGIGVPGDREVDMKRLEASLAPAEVALLEDSDFAANPFLVKGYIGPGALQANGVRYLVDP 364

Query: 587 R 587
           R
Sbjct: 365 R 365



 Score = 87.5 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 62/170 (36%), Gaps = 11/170 (6%)

Query: 484 KDAIGRDWQCGTIQVDFNLP---SRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMI 539
            D  G       I++           +AF V++      P+ I    +G  + R +  + 
Sbjct: 410 PDGRGTLVTARGIEIGHIFQLGRKYTDAFEVDALGPDSKPIRITMGSYGIGVSRVVAAIA 469

Query: 540 ENFKGN----LPLWLSP--IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           E          P  ++P  +  ++     +  E  + +A  L    + +  D R  T   
Sbjct: 470 EQHHDELGLVWPRSVAPADVHVVIAGKDDAVTEGGERLAAQLAERGVRVLLDDRKATPGV 529

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           K  +  +  +P I++ G +  ++  + ++   +    +V++  A+  L  
Sbjct: 530 KFADAELIGVPTIVVVG-RGLAKGVVEVKDRATGERTEVAVDSAVGHLVD 578


>gi|289705162|ref|ZP_06501565.1| proline--tRNA ligase [Micrococcus luteus SK58]
 gi|289558106|gb|EFD51394.1| proline--tRNA ligase [Micrococcus luteus SK58]
          Length = 608

 Score =  137 bits (344), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 42/203 (20%), Positives = 83/203 (40%), Gaps = 11/203 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E   HR L R   +        G+  W   G K+   +   +R ++     +E++ P 
Sbjct: 19  EAEVASHRLLVRAGYIR---RAAPGIYSWLPLGLKVLAQVERIVREEMDAIGAQEVHFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++ +G WD Y   +F ++      +    + L P +      +      SY++L
Sbjct: 76  LLPREPYEATGRWDEYGDGLFRLQD-----RRGNDYLLAPTHEEMFTLLVKDLYSSYKDL 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKD 417
           P  L +  + YR+E      GL+R R F   D++ F   +   +   + H    + I+  
Sbjct: 131 PAYLYQIQTKYRDEARPR-AGLLRGREFIMKDSYSFTVDDAGLDAAYEAHRAAYLRIFDR 189

Query: 418 FGFEKIMVKLSTRPEKRVGSDAL 440
            G E + V+ ++       S+  
Sbjct: 190 LGLEVVPVRATSGAMGGSRSEEF 212



 Score = 77.9 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 26/165 (15%), Positives = 69/165 (41%), Gaps = 13/165 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE----NF 542
           R  + G I Q+        +   ++ H ++   V++    +G  I R +  + E    + 
Sbjct: 443 RGMEMGHIFQLGRKYAEALDLKVLDVHGKQ---VVVTMGSYGIGITRAVAAIAERYHDDK 499

Query: 543 KGNLPLWLSP--IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHS 599
               P  ++P  +  +V T     +  A+ +A  L++  L++  D R + +   K ++  
Sbjct: 500 GLAWPRAVAPADVHVVVATKGEDGLAAAETLAAGLEAEGLTVLVDDRPKVSPGVKFKDAE 559

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  +P  ++ G +  ++  + ++   +   + V +  A+  +  E
Sbjct: 560 LIGVPTAVVVG-RGLADGELELKDRATGEARPVPVDGAVAAVLAE 603


>gi|269795644|ref|YP_003315099.1| prolyl-tRNA synthetase, family II [Sanguibacter keddieii DSM 10542]
 gi|269097829|gb|ACZ22265.1| prolyl-tRNA synthetase, family II [Sanguibacter keddieii DSM 10542]
          Length = 591

 Score =  137 bits (344), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 43/212 (20%), Positives = 84/212 (39%), Gaps = 11/212 (5%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
           +        ++E   HR L R   +        G+  W   G ++   + + +R +++  
Sbjct: 10  VRTLREDPADAEVASHRLLVRAGYIR---RAAPGIYTWLPLGLRVLAKVEAVVREEMQAA 66

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
             +E++ P +L +  ++ +G W  Y  N+F +K   D       + L P +      +  
Sbjct: 67  GAQEVHFPALLPREPYEATGRWTEYGPNLFRLKDRRDN-----DYLLAPTHEEMFTLLVK 121

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
               SY++LPV L +  + YR+E      GL+R R F   DA+ F   +        +  
Sbjct: 122 DLYSSYKDLPVTLFQVQTKYRDEARPR-AGLIRGREFVMKDAYSFDVDDAGLEASYLVQR 180

Query: 410 -LIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
                I+   G E ++V  ++       S+  
Sbjct: 181 AAYEKIFTRLGLEYVVVAATSGAMGGSRSEEF 212



 Score = 49.8 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/163 (13%), Positives = 57/163 (34%), Gaps = 11/163 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNL 546
           R  + G I Q+            ++ + ++    M    +   + R +  + E N     
Sbjct: 427 RGIEIGHIFQLGRKYADALGLKVLDVNGKQVTVTMGSYGI--GVTRALAALAEANHDEKG 484

Query: 547 PLWL---SPIQAIVTTITSSAVEY--AQEIANLLKSHHLSIETDFRNE-TINYKIREHSI 600
             W    +P    V         +  A+ IA  L +  + +  D R + +   K  +  +
Sbjct: 485 LAWPAHVAPAHVHVVATGKDPAVFAAAETIAQELSAQRVEVLYDDRPKVSPGVKFADAEL 544

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             +P++++   +  ++  + +R         V + +A   + +
Sbjct: 545 LGVPLVVVV-GRGLADGVVEVRPRVGGEAVSVPVAEAAQRVVE 586


>gi|229006095|ref|ZP_04163783.1| Prolyl-tRNA synthetase [Bacillus mycoides Rock1-4]
 gi|228755171|gb|EEM04528.1| Prolyl-tRNA synthetase [Bacillus mycoides Rock1-4]
          Length = 566

 Score =  137 bits (344), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 46/203 (22%), Positives = 88/203 (43%), Gaps = 11/203 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R +++     E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPLGLKVLHKVERIVREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K  +D     R FAL   +      +    +KSY++L
Sbjct: 74  LQAAELWQESGRWYSYGSELMRMKDRND-----REFALGATHEEVITDLVRDEIKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKD 417
           P+ L +  + +R+E      GL+R R F   DA+ F  T+E +      ++    +I+  
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEVYSGLYQAYSNIFAR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDAL 440
            G     V   +       +   
Sbjct: 188 CGLNFRAVIADSGAMGGKDTHEF 210



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 60/157 (38%), Gaps = 11/157 (7%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G +  +        NA +++ +  K  P+++     G   R +  + E F     
Sbjct: 404 RGIEVGHVFKLGTRYSEAMNATFLDENG-KTKPLIMGCYGIGVS-RTVAAVAEQFNDENG 461

Query: 546 --LPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              P  ++P    V  +   + +  E  + I N L+     +  D R E    K  +  +
Sbjct: 462 LVWPKAVAPFHVHVIPVNMKSDAQREVGETIYNSLQEQGYEVLLDDRAERAGVKFADADL 521

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
             +P+ +  G K A E  + ++   +  + +V + + 
Sbjct: 522 FGLPVRVTVGKK-ADEGIVEVKVRATNESAEVKVEEL 557


>gi|254253311|ref|ZP_04946629.1| Prolyl-tRNA synthetase [Burkholderia dolosa AUO158]
 gi|124895920|gb|EAY69800.1| Prolyl-tRNA synthetase [Burkholderia dolosa AUO158]
          Length = 578

 Score =  137 bits (344), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 55/287 (19%), Positives = 107/287 (37%), Gaps = 13/287 (4%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ + R   +  +A    G+  +   G +  + + + +R ++      E+  P 
Sbjct: 17  DAEIVSHKLMVRAGMIRRVA---GGIYNYLPIGLRSIRKVEAIVREEMNRAGAIELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    LWQ+SG W+ Y   +   K   D       F + P +      +  + +KSYR++
Sbjct: 74  VQPAELWQESGRWEQYGPELLRFKDRKDN-----DFVIGPTHEEVVTDIARNQIKSYRQM 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKD 417
           PV   +  + +R+E      G+MR R F   DA+ F       +E   K+++  + I+  
Sbjct: 129 PVNFYQIQTKFRDEIRPRF-GVMRGREFIMKDAYSFDKDAAGLDESYRKMYDAYVRIFTR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
            G E   V   +       S      A+     +     +     +     L   A    
Sbjct: 188 LGLEFRAVAADSGSIGGNFSHEFHVIADTGEDAIAYCPTSDFAANVEAAEALPLIAERAA 247

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLP--SRFNAFYVNSHSEKCHPVM 522
             E + K A     +C  +    N+P      +  + + +E   P +
Sbjct: 248 PVEALQKVATPGKAKCEAVAELLNIPLERTIKSIVLATDNEGTEPTI 294



 Score = 78.3 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 26/154 (16%), Positives = 59/154 (38%), Gaps = 11/154 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNL 546
           R  + G + Q+         A +++   +   P+++     G I R +G  IE NF    
Sbjct: 409 RGIEVGHVFQLGTKYSEAMGATFLDESGKPQ-PMLMGCYGVG-ITRILGAAIEQNFDDKG 466

Query: 547 PLWL---SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
            +W    +P + ++  +    + +  E A ++   L +  + +  D R E       +  
Sbjct: 467 IIWPESIAPFEVVLCPMGYDRSDAVREAADKLYAELVAAGIDVILDDRGERPGVMFADWE 526

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
           +  +P  ++ G++   E  I  +    T    + 
Sbjct: 527 LIGVPHRVVIGERGLKEGKIEYQGRRDTEATLLP 560


>gi|134294675|ref|YP_001118410.1| prolyl-tRNA synthetase [Burkholderia vietnamiensis G4]
 gi|166980110|sp|A4JBC2|SYP_BURVG RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|134137832|gb|ABO53575.1| prolyl-tRNA synthetase [Burkholderia vietnamiensis G4]
          Length = 578

 Score =  137 bits (344), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 46/207 (22%), Positives = 84/207 (40%), Gaps = 11/207 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ + R   +  +A    G+  +   G +  + + + +R ++      E+  P 
Sbjct: 17  DAEIVSHKLMVRAGMIRRVA---GGIYNYLPIGLRSIRKVEAIVREEMNRAGALELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    LWQ+SG W+ Y   +   K   D       F + P +      +  + +KSYR++
Sbjct: 74  VQPAELWQESGRWEQYGPELLRFKDRKDN-----DFVIGPTHEEVITDIARNQIKSYRQM 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKD 417
           PV   +  + +R+E      G+MR R F   DA+ F       NE   K+++  + I+  
Sbjct: 129 PVNFYQIQTKFRDEIRPRF-GVMRGREFLMKDAYSFDKDAAGLNESYRKMYDAYVRIFTR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDA 444
            G E   V   +       S      A
Sbjct: 188 LGLEFRAVAADSGSIGGNFSHEFHVIA 214



 Score = 81.4 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 24/164 (14%), Positives = 60/164 (36%), Gaps = 11/164 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNL 546
           R  + G + Q+         A +++   +   P+++     G   R +G  IE NF    
Sbjct: 409 RGIEVGHVFQLGTKYSEAMGATFLDESGKPQ-PMLMGCYGVGVT-RILGAAIEQNFDDKG 466

Query: 547 PLWL---SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
            +W    +P + ++  +    +    E A ++   L +  + +  D R E       +  
Sbjct: 467 IIWPESIAPFELVLCPMGYDRSEMVREAADKLYAELTAAGVDVILDDRGERPGVMFADWE 526

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  +P  ++ G++   +  +  +         +    A   +T+
Sbjct: 527 LIGVPHRLVIGERGLKDGKVEYQGRRDAEATLLPADAAAATVTE 570


>gi|313819523|gb|EFS57237.1| prolyl-tRNA synthetase [Propionibacterium acnes HL046PA2]
          Length = 581

 Score =  137 bits (344), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 48/220 (21%), Positives = 91/220 (41%), Gaps = 11/220 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  +        ++E   HR L R   +  +A    GV  W   G ++ + + +  R +
Sbjct: 2   SQLFVRTLREDPADAEVPSHRWLVRAGYIRRVA---PGVYSWLPLGLRVMRRIEAICREE 58

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E++ P +L    ++++G W  Y  N+F +K      +      L P +     
Sbjct: 59  MASIGAQEVSFPALLASDPYKETGRWVEYGDNLFRLKD-----RKGVDMLLGPTHEEMFT 113

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +      SY+ LP+ L +  + YR+E      G++R R F   DA+ F   ++  +E  
Sbjct: 114 LMVKDLYSSYKALPLCLYQIQNKYRDEARPR-AGILRGREFVMMDAYSFDVAQEGLDEAY 172

Query: 406 KIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
           +      I I+   GF+  +VK  + P     S+     A
Sbjct: 173 QAQRDAYIRIFNRLGFDYAIVKAMSGPMGGSRSEEFLAVA 212



 Score = 74.4 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 59/162 (36%), Gaps = 8/162 (4%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I Q+            ++ + +    V +     G       I          
Sbjct: 419 RGIEIGHIFQLGKKYADALGLKVLDHNGKLVT-VTMGSYGLGVSRAVAAIAEGTCDEKGL 477

Query: 548 LWL---SP--IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            W    +P  +Q + T   +  ++ A  IA+ L    L +  D R  +   K  +  I  
Sbjct: 478 CWPREVAPYDVQVLATGKGTEILDEATRIASELAEAGLEVLLDDRKASPGVKFADSEILG 537

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +P  ++ G +   +  + +R   +   ++VS+ +A+  + KE
Sbjct: 538 MPTSVVVG-RGLKDGLVEVRDRSTGENRQVSVAEAVCAVLKE 578


>gi|328944057|ref|ZP_08241522.1| proline--tRNA ligase [Atopobium vaginae DSM 15829]
 gi|327492026|gb|EGF23800.1| proline--tRNA ligase [Atopobium vaginae DSM 15829]
          Length = 616

 Score =  137 bits (344), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 44/181 (24%), Positives = 80/181 (44%), Gaps = 10/181 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++           +++   H+ L R   +    +  +G+  +    W+  Q + S +R +
Sbjct: 49  SKLYAPTLKEDPTDADIASHKLLVRAGMIR---KAAAGLYSYLPLAWRSIQKIESIIREE 105

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++  D +E+  P + D  LW QSG W +Y   +  +    D       +AL P +     
Sbjct: 106 MEAIDAQEMLAPILTDAELWHQSGRWGAYGPELMRLTDRHDH-----EYALGPTHEETFT 160

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +  + LKSY++LPV L      +R+E      GLMR R F   D + FC  ++  +EC 
Sbjct: 161 DLIRNELKSYKDLPVTLYHIQDKFRDERRPRF-GLMRGREFIMKDGYSFCANQESLHECY 219

Query: 406 K 406
           +
Sbjct: 220 E 220



 Score =  101 bits (252), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 28/178 (15%), Positives = 62/178 (34%), Gaps = 8/178 (4%)

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
            P     LK A G +      Q+         A +++    +  P ++     G      
Sbjct: 434 CPCCSAALKSARGIEIS-QVFQLGTKYSKAMGATFMDEDGTEK-PFIMGCYGIGVSRTLA 491

Query: 536 GIMIENFKGNLPLWL---SPIQAIVTT---ITSSAVEYAQEIANLLKSHHLSIETDFRNE 589
            ++ ++   +  +W    +P +  V        +    AQ +A  L    + +  D R E
Sbjct: 492 AVVEQSHDEHGIIWPVSVAPYEVAVIPLDVHDETVWPVAQRLAEGLIKAGIEVIVDDRGE 551

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLP 647
               K  +  +   P  ++CG K  +   + ++   +    +V + + +  L  E +P
Sbjct: 552 RPGIKFNDADLMGFPYQVVCGKKALAHACVEVKNRATGERTEVPVDEVVDHLVHEIVP 609


>gi|116872750|ref|YP_849531.1| prolyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|123463747|sp|A0AIC0|SYP_LISW6 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|116741628|emb|CAK20752.1| prolyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
          Length = 568

 Score =  137 bits (344), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 11/208 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E + H+ L R   +   A   SG+  +      + + + + +R +++     E+  P 
Sbjct: 17  DAEVKSHQLLLRAGFIRQTA---SGIYSYLPLATLMLRKIEAIIREELEAIGAAELLLPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W+ Y   +  +K      +  R FAL P +     A+    +KSY+ L
Sbjct: 74  LQPAELWQESGRWNDYGPELMRLKD-----RASRDFALGPTHEEVITALLRDEVKSYKRL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKD 417
           P+ L +  + +R+E      GL+R R F   DA+ F  T E +      +H    +I+  
Sbjct: 129 PLTLYQIQTKFRDEKRPRF-GLLRGREFIMKDAYSFHATSESLDEVYKLMHQAYSNIFTR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAE 445
            G E   V   +       S      +E
Sbjct: 188 CGLEFRSVIADSGSIGGNESKEFMALSE 215



 Score = 77.1 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 26/150 (17%), Positives = 58/150 (38%), Gaps = 8/150 (5%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW---LSPIQ 554
           +        NA  ++ +  +  P+++     G       I  ++   N  +W   +SP  
Sbjct: 414 LGTKYSEAMNATILDENG-RAQPIIMGCYGIGVSRILSAIAEQSNDENGLVWDKQISPFD 472

Query: 555 AIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
             +  +   +   V +A+ + + L+    S+  D R E    K  +  +  +PI I  G 
Sbjct: 473 LHLIPVNMKSEEQVAFAESLYDSLQKAGFSVLIDDRAERAGVKFADADLIGLPIRITVGK 532

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           K A+E  + ++   +    +V   + +  L
Sbjct: 533 K-AAEGIVEVKIRKTGEMIEVRQDELLNTL 561


>gi|210633121|ref|ZP_03297688.1| hypothetical protein COLSTE_01601 [Collinsella stercoris DSM 13279]
 gi|210159275|gb|EEA90246.1| hypothetical protein COLSTE_01601 [Collinsella stercoris DSM 13279]
          Length = 569

 Score =  137 bits (344), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 46/235 (19%), Positives = 93/235 (39%), Gaps = 12/235 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++           E+E   HR + R   +    +  +G+  +    W+  + +   +R +
Sbjct: 4   SKLYAPTLKEDPAEAELASHRLMLRAGLIR---KQAAGLYSYLPLAWRSLRKIEDIVRDE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E+  P ++D  +W++SG +++Y   +  +    D     R F L P +     
Sbjct: 61  MDAAGAQELLMPIMVDAQVWRESGRYNAYGPELMRIDDRHD-----REFVLGPTHEETVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNEC 404
            +  + LKSY++LPV L +    +R+E      GLMR R F   D + F  T+E +    
Sbjct: 116 DLIKNELKSYKQLPVNLYQIQDKFRDEMRPRF-GLMRGREFIMKDGYSFNATQESLQETY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSS 459
            ++     +I +  G + + V   +       S      A +  +  L       
Sbjct: 175 DEMKQAYANICERCGLKALPVVADSGQIGGDTSVEFMALA-DAGEAALVYCDACG 228



 Score = 97.5 bits (241), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 19/153 (12%), Positives = 57/153 (37%), Gaps = 7/153 (4%)

Query: 497 QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL---SPI 553
           Q+         A + + + E+  P ++     G        + ++  G+  +W    +P 
Sbjct: 411 QLGTKYSEAMGATFADENGEEK-PFLMGCYGVGVSRTLAASVEQHHDGHGIIWPVSIAPY 469

Query: 554 QAIVTTITSSAVEYAQEIA---NLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           +  +  +  +  E A+  A   + L +  + +  D R+     K  ++ +   P  I+ G
Sbjct: 470 EVSIMPLDPTIEECAEVCARLTDELCAAGIEVIVDDRDIRPGVKFADNDLMGFPYQIVLG 529

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +     ++ ++   +   + V++ +    +  
Sbjct: 530 KRGLKNGTVELKDRATGEREDVAIDEVAAKVAD 562


>gi|254819680|ref|ZP_05224681.1| prolyl-tRNA synthetase [Mycobacterium intracellulare ATCC 13950]
          Length = 583

 Score =  137 bits (344), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 54/359 (15%), Positives = 121/359 (33%), Gaps = 24/359 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +  +A    G+  W   G ++ + +   +R ++     +EI  P 
Sbjct: 19  DAEVASHKLLIRAGYIRPVA---PGLYSWLPLGLRVLRRIEGIVREEMNAIGGQEILFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++ +  W  Y  ++F +K      +    + L P +             SY++ 
Sbjct: 76  LLPRAPYEATNRWTEYGDSVFRLKD-----RRGSDYLLGPTHEELFTLTVKGEYSSYKDF 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKD 417
           PV L +  + YR+E      G++RVR F   D++ F   +         H      I+  
Sbjct: 131 PVLLYQIQNKYRDEARPR-AGILRVREFLMKDSYSFDVDDAGLKAAYHAHREAYQRIFAR 189

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
                ++V   +       S+    ++       +  +++     +   V     A   P
Sbjct: 190 LQVRYVIVSAVSGAMGGSASEEFLAESPVGEDTFVRCLESGYAANVEAVVTSRPEAQ--P 247

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
             + + +  +       TI    +  +  +     + ++    V++     G     + I
Sbjct: 248 -IDGLPEAVVHDTGDTPTIATLVDWANTADLGRTVTAADTLKNVLLKVREPGGDWELLAI 306

Query: 538 MI----ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIA-----NLLKSHHLSIETDFR 587
            +    E     L   L P         +   +Y   +        L+ + +    D R
Sbjct: 307 GLPGDREVDDKRLGAALEP-AEYAMLDDADFAKYPFLVKGYIGPKALRDNGVRYLVDPR 364



 Score = 77.9 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 59/160 (36%), Gaps = 11/160 (6%)

Query: 484 KDAIGRDWQCGTI---QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG-SIERFIGIMI 539
            D  G       I    +        +AF  +   E   PV +    +G  + R + ++ 
Sbjct: 409 PDGAGPLVSARGIEVAHIFQLGRKYTDAFTADVLGEDGKPVRLTMGSYGLGVSRMVAVIA 468

Query: 540 ENFKGNLPL-WLSPIQA-----IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           E     L L W S +       ++      A   A E+A  L    + +  D R  +   
Sbjct: 469 EQHHDELGLRWPSSVAPFDVHLVIANKDDRARTGATELAGELDRLGVDVLLDDRQASPGV 528

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
           K ++  +  +P I++ G +  ++  + +R      T++++
Sbjct: 529 KFKDAELLGVPWIVVVG-RGWADGVVELRDRFGGQTRELA 567


>gi|260220337|emb|CBA27773.1| Prolyl-tRNA synthetase [Curvibacter putative symbiont of Hydra
           magnipapillata]
          Length = 580

 Score =  137 bits (344), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 38/199 (19%), Positives = 83/199 (41%), Gaps = 11/199 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       ++E   H+ + R   +  +   G+G+  +   G ++ + + + +R 
Sbjct: 3   ASQFLISTLKEAPTDAEVVSHKLMMRAGMIKKL---GAGIYNYMPMGLRVIRKVEAIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P +    LWQ++G +D     +  +K      +  R + ++P +    
Sbjct: 60  EMNRAGAVELTMPVIQPAELWQETGRFDKMGPELLRIKD-----RHERDYVVQPTSEEVV 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    +KSY++LP  L +  + +R+E      GLMR R F   DA+ F   +      
Sbjct: 115 TDIARQEIKSYKQLPKNLYQIQTKFRDERRPRF-GLMRGREFIMKDAYSFDRDQDSAKAS 173

Query: 405 LKIH-NLIISIYKDFGFEK 422
            ++       I+  FG   
Sbjct: 174 YQVMAKAYRRIFDRFGLTY 192



 Score = 80.6 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 59/166 (35%), Gaps = 13/166 (7%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NF 542
           AI R  + G +  +        NA +++ + +   P  +    +G  I R     IE N 
Sbjct: 412 AIERGIEVGHVFYLGTKYSKAMNATFLDVNGK---PQFMEMGCYGIGITRLPAAAIEQNH 468

Query: 543 KGNLPLW---LSPIQAIVTTITSS----AVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
                +W   L+P   ++  I           A ++   L S  + +  D RNE      
Sbjct: 469 DDKGIIWPDALAPFTVVLCPINPDRFPDVKAAADKLYEELLSAGVDVILDDRNERPGAMF 528

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            +  +  +P  +  GD+   E  +  +    +    V + +   +L
Sbjct: 529 ADWELIGVPHRVNIGDRGLKEGVVEYQHRRESAATSVPVAEIASLL 574


>gi|308235415|ref|ZP_07666152.1| prolyl-tRNA synthetase [Gardnerella vaginalis ATCC 14018]
 gi|311114822|ref|YP_003986043.1| proline--tRNA ligase [Gardnerella vaginalis ATCC 14019]
 gi|310946316|gb|ADP39020.1| proline--tRNA ligase [Gardnerella vaginalis ATCC 14019]
          Length = 602

 Score =  137 bits (344), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 52/290 (17%), Positives = 99/290 (34%), Gaps = 23/290 (7%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
           +I +   GV  W   G K+   + + +R +I     +E++ P +L +  ++ +  W+ Y 
Sbjct: 29  YIRKSAPGVWTWLPLGLKVLNKVQAIIREEINGIGAQEVHFPALLPREPYEATNRWEEYG 88

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            N+F +K      +    + L P +      +      SY++LPV L +  + YR+E   
Sbjct: 89  DNIFRLKD-----RHEADYLLAPTHEEVFTLLVKDMYSSYKDLPVTLYQIQTKYRDEFRP 143

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              GL+R R F   DA+ F   E        +       I+   G + ++V   + P   
Sbjct: 144 R-AGLIRGREFIMQDAYSFSIDEDGLKSAYVEERAAYARIFDRLGIKYVIVHAVSGPMGG 202

Query: 435 VGSDALWD-DAENIMKGVLDTIKNSSQ-DRINTGVLLGEGAFYGPKFE------------ 480
             S+      A       L     +   + + T  +        PK E            
Sbjct: 203 SDSEEFLAPMAIGEDTFALAPSGKAWNVEALTTPEMQDVDCSATPKMETLDTPDAKTIEA 262

Query: 481 -YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG 529
              + + +         Q    L +   A    + +E        R +  
Sbjct: 263 LVKVSNDLHPREDGREWQASDTLKNLIIAVKHPADAEGGEHEEPWREIVA 312



 Score = 92.9 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 26/164 (15%), Positives = 63/164 (38%), Gaps = 12/164 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN- 545
           R  + G + Q+            +N + +    V +    +G  + R I  + E    + 
Sbjct: 436 RGVEIGQVFQLGLKYSKALGLSVLNENGKA---VPVWMGCYGIGVSRVIACLAETHHDDA 492

Query: 546 ---LPLWLSPIQAIVTTITSSAVEY--AQEIANLLKSHHLSIETDFRNE-TINYKIREHS 599
               P+ ++P Q  V       V +  A+++   L    + +  D R + +   K ++  
Sbjct: 493 GLAWPMAIAPAQVHVVATGKDQVAFDAAEKVVEELSKQGIEVIFDDRPKVSPGVKFKDAE 552

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  +P+I + G    +  +I IR    +  + + + +A   + +
Sbjct: 553 LVGVPLIAVAGRDTVNNGTIEIRDRNGSNVEAIPVDEAAARIVE 596


>gi|261879036|ref|ZP_06005463.1| phosphoribulokinase [Prevotella bergensis DSM 17361]
 gi|270334317|gb|EFA45103.1| phosphoribulokinase [Prevotella bergensis DSM 17361]
          Length = 553

 Score =  136 bits (343), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 49/244 (20%), Positives = 94/244 (38%), Gaps = 3/244 (1%)

Query: 1   MPSDIKLTFPD-GSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-S 58
           M   I +   + G     PV  T S+    +  ++    +   +N KV  +   V     
Sbjct: 1   MEQKITIRCKNNGQSIKVPVGTTLSETFRHLDLNMKYGPICARVNNKVEGMHYRVYHNKD 60

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           +E +             S   ++ +AV  ++    ++I   + +G+Y +    +P   ++
Sbjct: 61  VEYLDMTSGSGSRNYTRSLFFVLCKAVHDLYSGTDLSIDIPVSNGYYVNLQIGRPIEQED 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           +  I K+MQEII    P  + ++  E A  +FE K +  KV++L+SI      T Y+  +
Sbjct: 121 VDNIRKRMQEIIDAKLPITRYHVPTEDAIRMFEEKGDEAKVKLLKSI-GTIYTTYYKIDD 179

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D   G  + +T ++  F       G   R    R        T      E+ Q  +  
Sbjct: 180 YVDYYYGSLLTNTSKLYLFGLEKYFDGLLLRIPDLRNPGVLPEMTRQEKMFEIFQEHHHW 239

Query: 239 EESE 242
           +   
Sbjct: 240 QSIM 243


>gi|227495079|ref|ZP_03925395.1| proline--tRNA ligase [Actinomyces coleocanis DSM 15436]
 gi|226831531|gb|EEH63914.1| proline--tRNA ligase [Actinomyces coleocanis DSM 15436]
          Length = 603

 Score =  136 bits (343), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 40/212 (18%), Positives = 84/212 (39%), Gaps = 11/212 (5%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
           +        ++E   H+ L R   +   A    G+  W   G ++ + +   +R ++   
Sbjct: 10  VRTLREDPADAEVTSHKLLVRAGYIRRTA---PGIYTWLPLGLQVLKRIEKVVREEMDAV 66

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
             +E++ P +L    +Q++  W+ Y   +F ++      +    + L P +      +  
Sbjct: 67  GAQEVHFPALLPAEPYQKTNRWEEYGPTLFKLRD-----RKAADYLLAPTHEEMFTLLVK 121

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH- 408
               SY++LPV L +  + YR+E      GL+R R F   DA+ F   ++  N    +  
Sbjct: 122 DMYSSYKDLPVTLYQIQTKYRDEARPR-AGLIRGREFVMKDAYSFDIDQEGLNTSYDLQR 180

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
                I++  G E ++    +       S+  
Sbjct: 181 QAYQRIFERLGLEYVICSAMSGAMGGSRSEEF 212



 Score = 78.3 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 61/163 (37%), Gaps = 11/163 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF----K 543
           R  + G I Q+        +   ++ + +     M    V   + R +  + E+      
Sbjct: 434 RGIEIGHIFQLGKKYAEALDLKVLDQNGKTQVVTMGSYGV--GVSRVLAALAESCNDENG 491

Query: 544 GNLPLWLSP--IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSI 600
              P+ L+P  +Q + T       E A  IA  +      +  D R + +   K  +  +
Sbjct: 492 LAWPMILAPFHLQVLATGKGEELFETAGSIAKAVSDAGFDVLYDDRPKVSAGVKFADAEL 551

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             +P +++ G +   +  + +R   + T  ++ + +A   + +
Sbjct: 552 LGMPYVLVVG-RGLKDGVVELRDRRNGTAVELPVAEASAEILR 593


>gi|303258207|ref|ZP_07344214.1| proline--tRNA ligase [Burkholderiales bacterium 1_1_47]
 gi|302858960|gb|EFL82044.1| proline--tRNA ligase [Burkholderiales bacterium 1_1_47]
          Length = 582

 Score =  136 bits (343), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 47/216 (21%), Positives = 85/216 (39%), Gaps = 10/216 (4%)

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLF--HIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
               Q+    ++    D   +++++ L    I +  +GV  +   G +  + +   +R +
Sbjct: 1   MRAKQFFISTQKEAPADAEIVSQKLMLRAGMIRKLAAGVYNYMPMGLRSLKKIERIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P V    LWQ++G W  Y A +   K   D     R F L+P +     
Sbjct: 61  MDRAGAIELLMPIVQPAELWQETGRWQKYGAELLRFKDRHD-----RDFVLQPTSEEVVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNEC 404
            +    +KS+R+LPV   +  + +R+E      G+MR R F   DA+ F  T E      
Sbjct: 116 DIARQEIKSWRQLPVNFYQIQTKFRDERRPRF-GVMRGRDFVMKDAYSFDRTAEDAGKSY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            K+ +    I+   G     V+  +       S   
Sbjct: 175 DKMFDAYCRIFDRLGLVYRAVRADSGSIGGSRSQEF 210



 Score = 78.7 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 22/135 (16%), Positives = 44/135 (32%), Gaps = 9/135 (6%)

Query: 516 EKCHPVMIHRAVFGS-IERFIGIMIE-NFKGNLPLWL---SPIQAIVTTITSSAVEYAQ- 569
           E   P ++    +G  I R +G  IE        +W    +P   ++  +     E  Q 
Sbjct: 441 ENGKPQLLQMGCYGIGISRLLGAAIEQGHDDKGIIWPDSIAPFTVVICPVGYDKSEEVQK 500

Query: 570 ---EIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS 626
              E+   L+   + +  D R         +  +  +P  +  GD+      +     G 
Sbjct: 501 ASNELYGRLREAGIDVILDDRGLRPGVMFADWELIGVPHRVTIGDRGLKNGEVEYAHRGD 560

Query: 627 TTTQKVSLLDAIPIL 641
              + V + +    L
Sbjct: 561 LQNENVPVSEIADKL 575


>gi|227497547|ref|ZP_03927775.1| proline--tRNA ligase [Actinomyces urogenitalis DSM 15434]
 gi|226833001|gb|EEH65384.1| proline--tRNA ligase [Actinomyces urogenitalis DSM 15434]
          Length = 614

 Score =  136 bits (343), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 39/212 (18%), Positives = 81/212 (38%), Gaps = 11/212 (5%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
           +        ++E   H+ L R   +   A    G+  W   G  + + + + +R ++   
Sbjct: 10  IRTLREDPADAEVASHKLLVRASYIRRTA---PGIYTWLPLGLAVVRKIEAIVREEMNRM 66

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
             +E++ P +L    ++ +  WD Y   +F ++      +    + L P +      +  
Sbjct: 67  GGQEVHFPALLPAEPYKATQRWDEYGPTLFTLQD-----RKGGDYLLAPTHEEMFTLLAK 121

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
               SY++LP  L +  + YR+E      GL+R R F   D++ F   +   +   + H 
Sbjct: 122 DMFSSYKDLPATLYQIQTKYRDEARPR-AGLIRGREFIMKDSYSFDVDDAGLDASYQRHR 180

Query: 410 -LIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
                I++  G E + V           S+  
Sbjct: 181 DAYERIFRRLGLEYVPVNAMAGAMGGSHSEEF 212



 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 63/200 (31%), Gaps = 8/200 (4%)

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDF 500
           W    N +K  +  +        +  +   E        +      + R  + G I    
Sbjct: 391 WVTGANELKKHVLHLVKGRDFEADGTIEAAEVREGDLAPDGSGPLHLERGIEVGHIFALG 450

Query: 501 NLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAI 556
              ++   F V   + K   V +     G   R +  + E          P+ ++P    
Sbjct: 451 RKYAQALGFTVLDENGKARVVTMGSYGIGVS-RVMAALAEANHDERGLAWPIQVAPYHVQ 509

Query: 557 VTTITSSAVEYA--QEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKE 613
           V         +A    +A  L +  L +  D R + +   K  +  +  +P  ++ G   
Sbjct: 510 VLATGKDEQVFATAHALARELDAAGLEVLYDDRRKVSAGVKFADSELLGVPFTVVVGRDL 569

Query: 614 ASERSIGIRRFGSTTTQKVS 633
           A E ++ IR   S   + V 
Sbjct: 570 AKEGTVEIRDRRSGERRSVP 589


>gi|134297920|ref|YP_001111416.1| phosphoribulokinase/uridine kinase [Desulfotomaculum reducens MI-1]
 gi|134050620|gb|ABO48591.1| phosphoribulokinase/uridine kinase [Desulfotomaculum reducens MI-1]
          Length = 554

 Score =  136 bits (343), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 50/207 (24%), Positives = 89/207 (42%), Gaps = 2/207 (0%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           +IK+                 ++ +   +  +   VA  I+  + DL  P+  +  +  +
Sbjct: 2   EIKVLLEGDQSFEVSQGTPVMELLKIRHKEGSVPVVAAFIDNVLKDLRTPLTSDCHVRFV 61

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
               P  + V R S   ++  A+  I P     I   + +G Y +   ++P    ++A+I
Sbjct: 62  DLTMPEGVRVYRRSVTALLMRAISEILPGSNAVIQHSLGNGIYGEIHYDRPLKDKDIARI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E++M  II  D P++   L  E A  L     +  K+++L  +P KE + LY  G ++DL
Sbjct: 122 ERQMHYIIEADEPWVLMNLKKEDAERLLTEAGQTEKIQLLHYLP-KEEIELYSCGGYYDL 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWR 209
           C G  V STG +K F     + G    
Sbjct: 181 CHGALVPSTGILKNFRLRFYLPGFILE 207


>gi|331000280|ref|ZP_08323964.1| proline--tRNA ligase [Parasutterella excrementihominis YIT 11859]
 gi|329572446|gb|EGG54099.1| proline--tRNA ligase [Parasutterella excrementihominis YIT 11859]
          Length = 582

 Score =  136 bits (343), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 46/216 (21%), Positives = 84/216 (38%), Gaps = 10/216 (4%)

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLF--HIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
               Q+    ++    D   +++++ L    I +  +GV  +   G +  + +   +R +
Sbjct: 1   MRAKQFFISTQKEAPADAEIVSQKLMLRAGMIRKLAAGVYNYMPMGLRSLKKIERIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P V    LWQ++G W  Y + +   K   D     R F L+P +     
Sbjct: 61  MDRAGAIELLMPIVQPAELWQETGRWQKYGSELLRFKDRHD-----RDFVLQPTSEEVVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNEC 404
            +    +KS+R+LPV   +  + +R+E      G+MR R F   DA+ F  T E      
Sbjct: 116 DIARQEIKSWRQLPVNFYQIQTKFRDERRPRF-GVMRGRDFVMKDAYSFDRTAEDAGKSY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            K+      I+   G     V+  +       S   
Sbjct: 175 DKMFEAYCRIFDRLGLVYRAVRADSGSIGGSRSQEF 210



 Score = 78.7 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 22/135 (16%), Positives = 44/135 (32%), Gaps = 9/135 (6%)

Query: 516 EKCHPVMIHRAVFGS-IERFIGIMIE-NFKGNLPLWL---SPIQAIVTTITSSAVEYAQ- 569
           E   P ++    +G  I R +G  IE        +W    +P   ++  +     E  Q 
Sbjct: 441 ENGKPQLLQMGCYGIGISRLLGAAIEQGHDDKGIIWPDSIAPFTVVICPVGYDKSEEVQK 500

Query: 570 ---EIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS 626
              E+   L+   + +  D R         +  +  +P  +  GD+      +     G 
Sbjct: 501 ASNELYGRLREAGIDVILDDRGLRPGVMFADWELIGVPHRVTIGDRGLKNGEVEYAHRGD 560

Query: 627 TTTQKVSLLDAIPIL 641
              + V + +    L
Sbjct: 561 LQNENVPVTEIADKL 575


>gi|328955488|ref|YP_004372821.1| prolyl-tRNA synthetase [Coriobacterium glomerans PW2]
 gi|328455812|gb|AEB07006.1| prolyl-tRNA synthetase [Coriobacterium glomerans PW2]
          Length = 576

 Score =  136 bits (343), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 56/238 (23%), Positives = 98/238 (41%), Gaps = 18/238 (7%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
            HR L R   +  +A   SG+  +    W+  + +   +R ++     +E   P + D  
Sbjct: 26  SHRLLLRAGMIRKMA---SGIYSYLPLAWRSLKKIEEIVRDEMDAIGAQECLLPILTDAE 82

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+ SG WD+Y   +  +       +  R FAL P +      +  + L SYR+LPV L 
Sbjct: 83  LWRLSGRWDAYGPELMRIVD-----RHQRQFALGPTHEETVTDLVKNELASYRQLPVSLY 137

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDFGFEK 422
           +  + +R+E      GLMR R F   DA+ F   +    EC + +      I +  G   
Sbjct: 138 QIQTKFRDEMRPRF-GLMRGREFIMKDAYSFSATQASLQECYEDMKAAYGRICERCGLAA 196

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVL--DTIKNSSQD-----RINTGVLLGEGA 473
           + V   +       S      A++    ++  D+   ++ D     R++     G+GA
Sbjct: 197 LPVAADSGQIGGDTSVEYMALADSGEASLVYCDSCGFAADDEAASTRVSVTEGPGDGA 254



 Score = 83.7 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 21/147 (14%), Positives = 52/147 (35%), Gaps = 7/147 (4%)

Query: 497 QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL---SPI 553
           Q+         A + +    +  P+++     G       ++ ++      +W    +P 
Sbjct: 414 QLGTKYSLPMGATFTDEAG-RTQPMLMGCYGVGISRTLAAVVEQHHDEAGIIWPVSVAPY 472

Query: 554 QAIVTTITSSAVEYA---QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           +  +  + +           +A  L +  + +  D R E    K  ++ +   P  II G
Sbjct: 473 EVSIVLLDTKLQACVAAGDRLAFELSAGGIDVVLDDRAERPGVKFADNDLMGFPYQIIVG 532

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDA 637
            +  +  ++ I+   +     V+L DA
Sbjct: 533 KRGIAAGTVEIKDRATGERVDVALDDA 559


>gi|60683574|ref|YP_213718.1| putative phosphoribulose/uridine kinase [Bacteroides fragilis NCTC
           9343]
 gi|60495008|emb|CAH09826.1| putative phosphoribulose/uridine kinase [Bacteroides fragilis NCTC
           9343]
          Length = 554

 Score =  136 bits (343), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 44/238 (18%), Positives = 97/238 (40%), Gaps = 3/238 (1%)

Query: 4   DIKLTFPDGSI-KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEI 61
            +++   + +I K FP+ ++  D+    + +   + V+  +N +   L+  V     +E 
Sbjct: 1   MLQIYCKNNNISKEFPIGSSLLDIYYGFNLNFPYQVVSAKVNNRSEGLNFRVYNNKDVEF 60

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +   D   +     S   ++ +AV  ++P  ++ +   +  G++ +    +P + ++++Q
Sbjct: 61  LDVRDSSGMRTYVRSLCFVLYKAVSELFPNGKLFVEHPVSKGYFCNLRIGRPVTLEDVSQ 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           I+K+MQEIIA D  + +      +A  +F  +    KV++LES         Y  G   D
Sbjct: 121 IKKRMQEIIAEDITYHRIECHTTEAVRVFSERGMNDKVKLLES-SGSIYTYYYTLGGTAD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
              G  + STG +  F  +    G   R  +                 ++ +      
Sbjct: 180 YYYGNLLPSTGFIHLFDLVKYYDGLLLRIPNKENPSVLEDVVKQEKMLDVFKEHLRWN 237


>gi|70726652|ref|YP_253566.1| prolyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
 gi|114152257|sp|Q4L5W5|SYP_STAHJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|68447376|dbj|BAE04960.1| proline-tRNA ligase [Staphylococcus haemolyticus JCSC1435]
          Length = 566

 Score =  136 bits (343), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 50/221 (22%), Positives = 93/221 (42%), Gaps = 11/221 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        E+E   H+ L +      I +  SG+  +     ++   +   +R +
Sbjct: 4   SKVFIPTRRDVPAEAEALSHQLLLKAG---LIKQSTSGIYSYLPLASRVLNNISKIIREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++  D  EI  P +    LW++SG W +Y   +  +K      ++ R FAL P +     
Sbjct: 61  MESIDAVEILMPALQQAELWEESGRWGAYGPELMRLKD-----RNGREFALGPTHEEVVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           ++    LKSY++LP+ L +  S +R+E      GL+R R F   DA+ F   E   +E  
Sbjct: 116 SIVRDELKSYKQLPLTLFQIQSKFRDEKRPRF-GLLRGREFIMKDAYSFHADEASLDETY 174

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
           + ++N    I+K  G     V   +       +      +E
Sbjct: 175 QDMYNAYDRIFKRVGINARPVVADSGAIGGNHTHEFMALSE 215



 Score = 68.3 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 24/146 (16%), Positives = 55/146 (37%), Gaps = 9/146 (6%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQA-- 555
           +        NA ++++   K  P+++     G       I+ +N   N  +W   +    
Sbjct: 413 LGTKYSEAMNATFLDNQG-KAKPLIMGCYGIGVSRTLSAIVEQNNDENGIIWPKSVTPFD 471

Query: 556 ----IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
                +       +E   ++   L+     +  D R +    K  +  +  +PI I+ G 
Sbjct: 472 LHLITINPKKDEQLELGDQLYKELQQQ-YDVLYDDRKDRAGVKFNDADLIGLPIRIVVG- 529

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDA 637
           K ASE  + ++   +  +++V + D 
Sbjct: 530 KNASEGIVEVKVRQTGESEEVHINDL 555


>gi|319760426|ref|YP_004124364.1| prolyl-tRNA synthetase [Candidatus Blochmannia vafer str. BVAF]
 gi|318039140|gb|ADV33690.1| prolyl-tRNA synthetase [Candidatus Blochmannia vafer str. BVAF]
          Length = 595

 Score =  136 bits (343), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 47/217 (21%), Positives = 91/217 (41%), Gaps = 11/217 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            TQ  LT      +  E   H+ + R   +  I+   +G+  W   G ++ + + + +R 
Sbjct: 3   ATQYLLTTLKEIPKNCETISHQLMLRSGMIRQIS---TGLYTWLPIGLRVLRKVENIVRD 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +  + EI+ P +   +LW+QSG W  Y   +   K   +     + F L P +    
Sbjct: 60  EMNNISFIEISMPIIQPANLWKQSGRWSEYGPELLRFKNRVN-----QEFVLGPTHEEMI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++ P++L +  + YR+E      GL+R + FT  D + F T  +     
Sbjct: 115 SNLICKEIISYKQFPIKLYQMNTKYRDEIRPRF-GLIRAKEFTMKDGYSFHTNNKCLQNT 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
              I++   +I+   G    +V+  T       S   
Sbjct: 174 YNNIYHQYHTIFNRIGLNFHVVQADTGNTGGTLSHEF 210



 Score = 56.3 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/162 (13%), Positives = 53/162 (32%), Gaps = 8/162 (4%)

Query: 490 DWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW 549
             + G I    +  SR     +  +++    +++     G       I+ +N+     +W
Sbjct: 429 KIEIGHIFQLGDKYSRSIYSCIQKYNKFNIKIIMGCYGIGITRIIPTIIEQNYDQYGIIW 488

Query: 550 L---SPIQAIVTTITSSAVEYAQEIANLLKSH-----HLSIETDFRNETINYKIREHSIK 601
               +P +  +  I        +     L +         +    R E       +  + 
Sbjct: 489 PDSIAPFKLAIIPINMHVSVNVRNTTEELYTQFKSIIGSDVFIYDRKENPGIMFADIDLI 548

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            IP I++  D+  + + +  +   + TT K+ L   +  L  
Sbjct: 549 GIPHILVISDRNLNNQEVEYKHRKTRTTTKIKLDVILQFLIN 590


>gi|254521784|ref|ZP_05133839.1| prolyl-tRNA synthetase [Stenotrophomonas sp. SKA14]
 gi|219719375|gb|EED37900.1| prolyl-tRNA synthetase [Stenotrophomonas sp. SKA14]
          Length = 567

 Score =  136 bits (343), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 48/227 (21%), Positives = 87/227 (38%), Gaps = 14/227 (6%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  L        ++E   HR + R   +  +A   SG+  W   G ++ + +   +R +
Sbjct: 4   SQFHLHTTKETPSDAELTSHRLMLRAGMIRKLA---SGLYTWSPLGLRVLRKVERIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E   P +  + LW+Q+G W  +   +  +K   D     + F   P       
Sbjct: 61  MDRAGAVEFQIPTIQPKELWEQTGRWQKFGPQLLKIKDRKD-----QVFCYSPTAEEAAC 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT-KEQMFNEC 404
                 L SY++LPV   +  + +R+E      G+MR R F   DA+ F    E +  E 
Sbjct: 116 DFARSELSSYKQLPVNFYQVQTKFRDEIRPRF-GVMRSREFLMKDAYSFHLHDECLVREY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALW---DDAENIM 448
             + +    I+   G +  MV+  +       S       D  E+ +
Sbjct: 175 ENMKSAYSRIFTRLGLDFRMVQADSGAIGGDASQEFHVIADSGEDAL 221



 Score = 76.7 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 23/164 (14%), Positives = 55/164 (33%), Gaps = 13/164 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN- 545
           R  + G + Q+        +A  ++ + +     ++    +G  I R +   IE    + 
Sbjct: 406 RGIEVGHVFQLGRTYAKALDATVLDENGKA---AVMAMGCYGIGISRVVAAAIEQNHDDA 462

Query: 546 ---LPLWLSPIQAIVTTITSS----AVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
               P  ++P Q +V  I         + A  +   L+   L    D R         + 
Sbjct: 463 GIIWPDAMAPWQVVVCVINPKGDAAVADAAASLLQELRDAGLDAALDDRGLRPGAMFADM 522

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +  IP  ++  ++  +  +   R   ++  + +     +  L 
Sbjct: 523 ELIGIPHRVVVSERGLAAGTYEYRSRRASEAESLDKATLLQRLQ 566


>gi|317504468|ref|ZP_07962446.1| phosphoribulokinase [Prevotella salivae DSM 15606]
 gi|315664411|gb|EFV04100.1| phosphoribulokinase [Prevotella salivae DSM 15606]
          Length = 553

 Score =  136 bits (343), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 44/242 (18%), Positives = 96/242 (39%), Gaps = 3/242 (1%)

Query: 1   MPSDIKLTFPDGSIKN-FPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-S 58
           M  ++++   +        + +T SDV      +L    +   +N KV  +   V     
Sbjct: 1   MKQEVQIRCKNNKKTEKVAIGSTLSDVFSQFKLTLPYGPICAKVNNKVEGMHYRVYHSKD 60

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           +E +  + P +      +   ++ +AV  ++P+  V I   + +G+Y +     P +  +
Sbjct: 61  VEFLNMQAPSASRNYTRTLFFVLCKAVHDLYPKSYVIIDIPVSNGYYVNLQLGHPVTPTD 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           +  I +++QEII    P  +  +  E+A  +F  + +  K ++LES   +   T Y   +
Sbjct: 121 VECIHQRIQEIIDAHLPIKRFEVPTEQAITMFRERGDEAKAKLLES-AGRLYTTYYEIDD 179

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D   G  + +T ++  F       G   R  S             +   E+ +  +  
Sbjct: 180 YIDFYYGSLLTNTKKLYLFGLDKYYDGLLLRVPSIENPAVLPDIIPQDKMFEIFKEHHKW 239

Query: 239 EE 240
           +E
Sbjct: 240 QE 241


>gi|298528346|ref|ZP_07015750.1| prolyl-tRNA synthetase [Desulfonatronospira thiodismutans ASO3-1]
 gi|298511998|gb|EFI35900.1| prolyl-tRNA synthetase [Desulfonatronospira thiodismutans ASO3-1]
          Length = 577

 Score =  136 bits (343), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 85/198 (42%), Gaps = 11/198 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  +        E+E   H+ + R   +  +    +G+  +   GW+  Q +   +R 
Sbjct: 3   WSRYFMPTLKEEPAEAEVVSHKLMLRAGMIRKL---TAGIYTYLPAGWRALQKISEVIRG 59

Query: 286 KIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++   Y  E+  P V    LW+++G W++Y   +   +   D     R + + P +    
Sbjct: 60  EMNRFYAIELLMPAVQPGDLWKETGRWEAYGKELLRFRDRHD-----RDYCIGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SYR+LP+ L +  + +R+E      GLMR R F   DA+ F   E    + 
Sbjct: 115 TDLIRREVSSYRQLPLNLYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSFDKDEAGAAQS 173

Query: 405 LK-IHNLIISIYKDFGFE 421
            + +    +SI++  G +
Sbjct: 174 YEWMRQAYVSIFEKLGLQ 191



 Score = 75.6 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 24/147 (16%), Positives = 55/147 (37%), Gaps = 9/147 (6%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPI 553
           +        NA Y++ H  +  P+++     G   R +   IE             ++P 
Sbjct: 413 LGAKYSQSMNAAYLDEHGAEK-PLIMGCYGIGV-GRVLAACIEQNHDENGIIFTPAIAPF 470

Query: 554 QAIVT---TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           +  +            +++ + N L S ++ +  D R+E   +K ++  +   P+ +I G
Sbjct: 471 EVTIIALNPKDEMVRNHSESLYNELCSQNVDVLLDDRDERPGFKFKDCDLVGSPLQVIVG 530

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDA 637
            K      + ++   S    ++ L D 
Sbjct: 531 AKGIKNGVLEVKERHSGHRHELPLEDF 557


>gi|217969648|ref|YP_002354882.1| prolyl-tRNA synthetase [Thauera sp. MZ1T]
 gi|217506975|gb|ACK53986.1| prolyl-tRNA synthetase [Thauera sp. MZ1T]
          Length = 582

 Score =  136 bits (343), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 44/198 (22%), Positives = 81/198 (40%), Gaps = 10/198 (5%)

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLF--HIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
              +Q+  F  +    D   +++++ L    I +  +G+  +   G +  + + + +R +
Sbjct: 1   MRASQFHLFTLKEAPSDAEVVSQKLMLRAGMIRKVAAGIYSYMPMGLRAIRKVEAIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P V    LW ++G WD     +   K      +  R FAL+P +     
Sbjct: 61  MDRAGAMELIMPMVQPAELWDETGRWDKMGDELLRFKD-----RHERDFALQPTSEEVVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    LKSYR+LP    +  + +R+E      G+MR R FT  DA+ F   E+      
Sbjct: 116 DIARQELKSYRQLPKNFYQIQTKFRDERRPRF-GVMRGREFTMKDAYSFDRSEEAAGRSY 174

Query: 406 K-IHNLIISIYKDFGFEK 422
             +      I+   G E 
Sbjct: 175 DIMFAAYKRIFDRLGLEY 192



 Score = 74.4 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 27/162 (16%), Positives = 60/162 (37%), Gaps = 11/162 (6%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           AI R  + G +  +        NA +++   +  H  M    +   + R +G  IE    
Sbjct: 413 AIQRGIEVGHVFYLGTKYSKAMNATFLDEDGKPKHFEMGCYGI--GVTRILGAAIEQNHD 470

Query: 545 N----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                 P  ++P + +V  +    + +  + AQ++ + L +  +    D R+E       
Sbjct: 471 ARGIVWPRAIAPFEVVVCPVGWGKSQAVRDEAQKLYDALVATGVDAILDDRDERPGVMFA 530

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           +  +  +P  +  GD+   E  I  +        K+   + +
Sbjct: 531 DWELIGVPHRVTIGDRGLKEGVIEYQGRRDAEAAKLPAGEVL 572


>gi|238488527|ref|XP_002375501.1| prolyl-tRNA synthetase [Aspergillus flavus NRRL3357]
 gi|220697889|gb|EED54229.1| prolyl-tRNA synthetase [Aspergillus flavus NRRL3357]
          Length = 603

 Score =  136 bits (343), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 79/413 (19%), Positives = 155/413 (37%), Gaps = 67/413 (16%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRAN 317
            D SG        + I++ +  +   +IK    +  + P  + + +  ++  H + + A 
Sbjct: 116 YDVSGCFILKPASYFIWEEIQEWFNARIKKIGVKNCSFPLFVSEDVLNREKDHIEGFAAE 175

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           +  V  A  +  + +  A++P +       ++  ++S+R+LP++L ++ SV R E     
Sbjct: 176 VAWVTHAGSSPLEKK-IAIRPTSETVMYPYYSKWIRSHRDLPLKLNQWNSVVRWEFKNP- 233

Query: 378 HGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
              +R R F   + H    TK+   +E + I +L   IY++     ++    T  EK  G
Sbjct: 234 QPFLRTREFLWQEGHTAHLTKDGAHDEVMHILDLYAQIYEELLAVPVVKGQKTEKEKFAG 293

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
                                                 Y    E  +  A GR  Q GT 
Sbjct: 294 G------------------------------------LYTTTVEGYIP-ATGRGIQGGTS 316

Query: 497 Q-VDFNLPSRFNAFYVNSH---SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
             +  N    FN    +      EK  P+ + +  +G   R +G+M+     N  L L P
Sbjct: 317 HGLGQNFSKMFNITVEDPSTKPDEKKPPLHVWQNSWGLSTRTLGVMVMIHSDNRGLVLPP 376

Query: 553 ----IQAIVTTI------TSSAVE--YAQE--IANLLKSHHLSIETDFR-NETINYKIRE 597
                Q ++  +      +    E  YA+   + N+L    +   +D R   +  +K  +
Sbjct: 377 RVADTQTVIVPVGITAKTSDEEREKLYAEIDGLVNILTGAGVRAISDKREGYSPGWKFND 436

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRF------GSTTTQKVSLLDAIPILTKE 644
             ++ +P+ I  G  E+  + +   R       G ++ Q   L  A+P L ++
Sbjct: 437 WELRGVPLRIEFGPGESVGQFVTAARRDIPGKDGKSSIQISELSTAVPALLEQ 489


>gi|71991346|ref|NP_001022778.1| Prolyl tRNA Synthetase family member (prs-1) [Caenorhabditis
           elegans]
 gi|51988138|gb|AAU20840.1| Prolyl trna synthetase protein 1, isoform b [Caenorhabditis
           elegans]
          Length = 454

 Score =  136 bits (343), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 65/406 (16%), Positives = 134/406 (33%), Gaps = 54/406 (13%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
            +Q L       +++    + ++  + ++     D SG        + +++++  +    
Sbjct: 84  KKQTLLGVGTKKDDNYSEWYSEVITKAEMIEY-YDVSGCYVLRPWSFAVWESIQEWFDSG 142

Query: 287 IKD-DYEEINTPQ-VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           IK    +    P  V +  L ++  H   +   +  V  A ++       A++P +    
Sbjct: 143 IKKLGVKNCYFPMFVSNAALEREKTHIADFAPEVAWVTRAGNSEM-AEPIAIRPTSETVM 201

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNE 403
              +   ++S+R+LP++L ++ +V R E        +R R F   + H  F        E
Sbjct: 202 YPSYKKWVQSHRDLPIKLNQWCNVVRWEFKHPT-PFLRTREFLWQEGHTAFANPADAEKE 260

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             +I +L   +Y D     ++    +  EK  G D                         
Sbjct: 261 VFQILDLYAGVYTDLLAIPVVKGRKSEKEKFAGGD------------------------- 295

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
                      +    E  +    GR  Q  T        S+         +++      
Sbjct: 296 -----------FTTTVEAYV-ACNGRGIQGATSHHLGQNFSKMFDISYEDPAKEGERAFA 343

Query: 524 HRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTTIT------SSAVEYAQEIAN 573
            +  +G   R IG M+     +  L L P    +Q IV  +        S  +   ++  
Sbjct: 344 WQNSWGLSTRTIGAMVMIHGDDKGLVLPPRVAAVQVIVVPVGFKTENKQSLFDAVDKVTK 403

Query: 574 LLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERS 618
            L +  +  E D R N    +K     +K +PI    G  + ++  
Sbjct: 404 DLVADGVKAEHDLRENYNAGWKFNHWELKGVPIRFEVGPNDLAKNQ 449


>gi|228922573|ref|ZP_04085873.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228837002|gb|EEM82343.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 566

 Score =  136 bits (343), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 46/208 (22%), Positives = 91/208 (43%), Gaps = 11/208 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R +++     E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K      ++ R FAL   +      +    +KSY++L
Sbjct: 74  MQAAELWQESGRWYSYGSELMRMKD-----RNAREFALGATHEEVITDLVRDEVKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKD 417
           P+ L +  + +R+E      GL+R R F   DA+ F  T+E +     +++    +I+  
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEVYDRLYKAYSNIFAR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAE 445
            G     V   +       +      +E
Sbjct: 188 CGLNFRAVIADSGAMGGKDTHEFMVLSE 215



 Score = 79.4 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 61/157 (38%), Gaps = 11/157 (7%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G +  +        NA +++ +  K  P+++     G   R +  + E F     
Sbjct: 404 RGIEVGHVFKLGTRYSEAMNATFLDENG-KTQPLIMGCYGIGVS-RTVAAIAEQFNDENG 461

Query: 546 --LPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              P  ++P    V  +   + +  E  + I N L+     +  D R E    K  +  +
Sbjct: 462 LVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERAGVKFADADL 521

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
             +P+ +  G K A E  + ++   +  +++V + + 
Sbjct: 522 FGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEEL 557


>gi|308068985|ref|YP_003870590.1| Prolyl-tRNA synthetase class II (Proline--tRNA ligase class II)
           [Paenibacillus polymyxa E681]
 gi|305858264|gb|ADM70052.1| Prolyl-tRNA synthetase class II (Proline--tRNA ligase class II)
           [Paenibacillus polymyxa E681]
          Length = 579

 Score =  136 bits (343), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 55/284 (19%), Positives = 102/284 (35%), Gaps = 19/284 (6%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  LT       E+E   H+ + R   +  +A    G+  +   G ++ + +   +R +
Sbjct: 4   SQLLLTTLREAPAEAEVISHQLMLRGGFIRQLAA---GMYTYMPLGRRVLRKVEQIVRDE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P +    LWQ+SG +D Y   +  ++   D     R FAL P +     
Sbjct: 61  MDRAGAGELLMPVLQPTELWQESGRYDVYGPELMRLQDRHD-----REFALGPTHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT-KEQMFNEC 404
           ++  + + SYR+LPV L +  + +R+E      GL+R R F   DA+ F    E + +  
Sbjct: 116 SLIRNEVNSYRKLPVTLYQIQTKFRDERRPRF-GLLRSREFLMKDAYSFDAHWEGLDHTY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG-SDALWDDAENIMKGVLDTIKNSSQDRI 463
             +      I+   G     V+         G +      A+     ++          +
Sbjct: 175 WTMFRAYHRIFTRCGLYFRAVEADAGAIGGEGETHEFMALADIGEDTIVACTCCEYAANL 234

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFN 507
              V    G     K E         +        D     +F+
Sbjct: 235 EKAVARSTG-----KIEIA--PVSDENEHVSHPSFDTVKMEKFH 271



 Score = 85.2 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 25/152 (16%), Positives = 62/152 (40%), Gaps = 8/152 (5%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW---LSPIQ 554
           +      +  A ++++   +   +++     G       I+ +N   N  +W   L+P Q
Sbjct: 428 LGTKYSEKLGATFLDAFGTEQ-AMIMGCYGIGVSRILSAIVEQNHDQNGMIWPYALAPFQ 486

Query: 555 AIVTTITSS---AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
             +  I+      ++ A+++ N L+   + +  D R E    K ++  +  IP+ I+ G 
Sbjct: 487 VHIIPISVKDRLQMQIAEKLYNQLQDRGVEVLLDDREERPGVKFKDSDLVGIPVRIVVG- 545

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           K+A    + +    S   + + + D    + +
Sbjct: 546 KDAEHGKVELVERKSCNKETIHIEDIERRILE 577


>gi|108799043|ref|YP_639240.1| prolyl-tRNA synthetase [Mycobacterium sp. MCS]
 gi|119868158|ref|YP_938110.1| prolyl-tRNA synthetase [Mycobacterium sp. KMS]
 gi|126434646|ref|YP_001070337.1| prolyl-tRNA synthetase [Mycobacterium sp. JLS]
 gi|122977105|sp|Q1BAA0|SYP_MYCSS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|152112933|sp|A1UER2|SYP_MYCSK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|108769462|gb|ABG08184.1| prolyl-tRNA synthetase [Mycobacterium sp. MCS]
 gi|119694247|gb|ABL91320.1| prolyl-tRNA synthetase [Mycobacterium sp. KMS]
 gi|126234446|gb|ABN97846.1| prolyl-tRNA synthetase [Mycobacterium sp. JLS]
          Length = 584

 Score =  136 bits (343), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 40/208 (19%), Positives = 82/208 (39%), Gaps = 11/208 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +  +   G G+  W   G ++F+ +   +R ++     +EI  P 
Sbjct: 19  DAEVPSHKLLIRAGYVRPV---GPGLYTWLPLGLRVFRKIEQIVRDEMTAIGGQEILFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++ +  W  Y   +F +K   D       + L P +             SY++ 
Sbjct: 76  LLPRAPYETTNRWTEYGDTLFRLKDRRDN-----DYLLGPTHEELFTLTVKGEYSSYKDF 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKD 417
           P+ L +  + YR+E      G++R R F   D++ F   +        +H      I+  
Sbjct: 131 PLILFQIQTKYRDEARPR-AGILRGREFVMKDSYSFDVDDDGLKTAYHLHREAYQRIFAR 189

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAE 445
            G   ++V   +       S+    ++E
Sbjct: 190 LGVHYVIVSAVSGAMGGSASEEFLAESE 217



 Score = 85.2 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 27/156 (17%), Positives = 59/156 (37%), Gaps = 10/156 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN----FK 543
           R  + G I Q+       F+A  +    +     M    +   + R + ++ E       
Sbjct: 423 RGIEIGHIFQLGRKYTEAFSADVLGEDGKPVRLTMGSYGI--GVSRLVAVIAEQQHDELG 480

Query: 544 GNLPLWLSP--IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
              P  ++P  +  ++      A   A E+A  L    L +  D R  +   K ++  + 
Sbjct: 481 LRWPAAVAPFDVHVVIANKDDGARTGATELAGELDRLGLEVLLDDRKSSPGVKFKDAELL 540

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
            +P I++ G +   +  + +R   S   +++ + DA
Sbjct: 541 GVPWIVVVG-RGWGDGVVELRDRFSGEKREIGVDDA 575


>gi|330685674|gb|EGG97315.1| proline--tRNA ligase [Staphylococcus epidermidis VCU121]
          Length = 567

 Score =  136 bits (343), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 52/243 (21%), Positives = 98/243 (40%), Gaps = 11/243 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        E+E   HR L +      I +  SG+  +     ++   +   +R +
Sbjct: 4   SKVFIPTMREVPAEAEALSHRLLLKAG---LIKQSTSGIYSYLPLATRVLNNISKIIREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++  D  EI  P +    LW++SG W +Y   +  +K      ++ R FAL P +     
Sbjct: 61  MEKVDAVEILMPALQQAELWEESGRWGAYGPELMRLKD-----RNGREFALGPTHEEVVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           ++    LKSY+ LP+ L +  S +R+E      GL+R R F   DA+ F   E   +E  
Sbjct: 116 SLVRDELKSYKRLPLTLFQIQSKFRDEQRPRF-GLLRGREFIMKDAYSFHADEASLDETY 174

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
           + ++N    I+K  G     V   +       +      +E     ++ + ++     I 
Sbjct: 175 QDMYNAYDRIFKRVGINARPVVADSGAIGGNHTHEFMALSEIGEDTIVYSNESDYAANIE 234

Query: 465 TGV 467
              
Sbjct: 235 KAE 237



 Score = 73.7 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 20/146 (13%), Positives = 56/146 (38%), Gaps = 9/146 (6%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQA-- 555
           +        NA ++++   K  P+++     G       I+ ++   N  +W   +    
Sbjct: 413 LGTKYSETMNATFLDNQG-KAQPLIMGCYGIGVSRTLSAIVEQHHDDNGIIWPKSVTPFD 471

Query: 556 ----IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
                +        E   ++ + L ++   +  D R E    K  +  +  +PI ++ G 
Sbjct: 472 LHLITINPKKEDQRELGNQLYDQLMNN-YDVLYDDRQERAGVKFNDADLIGLPIRVVVGK 530

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDA 637
           + A E  + +++  +  ++++ + D 
Sbjct: 531 R-AEEGIVEVKQRSTGESEEIHIDDL 555


>gi|29829100|ref|NP_823734.1| prolyl-tRNA synthetase [Streptomyces avermitilis MA-4680]
 gi|81838439|sp|Q82K46|SYP1_STRAW RecName: Full=Prolyl-tRNA synthetase 1; AltName: Full=Proline--tRNA
           ligase 1; Short=ProRS 1
 gi|29606206|dbj|BAC70269.1| putative prolyl-tRNA synthetase [Streptomyces avermitilis MA-4680]
          Length = 564

 Score =  136 bits (343), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 42/216 (19%), Positives = 89/216 (41%), Gaps = 11/216 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++E  +H+ L R   +   A    G+  W   G K+ + +   +R +
Sbjct: 8   SRLMVKTLRDDPADAETLNHKLLVRADYVRRTAA---GIWSWLPLGKKVLENVARVVREE 64

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E+  P +L +  ++ +G W+ Y   +F +K      +    + L P +     
Sbjct: 65  MDAMGGQEVLLPALLPKEPYEATGRWEEYGPELFRLKD-----RKGAEYLLGPTHEEIFT 119

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +      SY++LPV L +  + YR+E      G++R R F   D++ F T ++   +  
Sbjct: 120 QLVKDQCSSYKDLPVILYQIQAKYRDEARPR-AGILRGREFLMKDSYSFDTADEGLAQSY 178

Query: 406 KIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            +H    I I+   G +  +V   +       S+  
Sbjct: 179 ALHREAYIKIFNRLGLDHRIVSAVSGAMGGSASEEF 214



 Score = 86.8 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 60/163 (36%), Gaps = 10/163 (6%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           + R  + G I Q+       F    +    +     M    +   + R +  + E     
Sbjct: 404 LDRAIEIGHIFQLGRKYADAFQLDVLGKEGKPVRVTMGSYGI--GVSRAVAALAEQTADE 461

Query: 546 LPL-WL---SPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHS 599
             L W    +P    V     +   E A ++A  L +  + +  D R   +   K  +  
Sbjct: 462 QGLCWPKEIAPADVHVVAAGKALQTELALDVAEKLGAAGVRVLVDDRAGVSPGVKFTDAE 521

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +  +P I++ G + A    + ++   +   +++++ +AI  L+
Sbjct: 522 LIGVPQILVAGRRSAE-GVLELKDRKTGEREELTVEEAIARLS 563


>gi|313609001|gb|EFR84741.1| prolyl-tRNA synthetase [Listeria monocytogenes FSL F2-208]
          Length = 344

 Score =  136 bits (342), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 11/208 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E + H+ L R   +   A   SG+  +      + + + + +R +++     E+  P 
Sbjct: 17  DAEVKSHQLLLRAGFIRQTA---SGIYSYLPLATLMLRKIETIIREELEAIGAAELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W+ Y   +  +K      +  R FAL P +     A+    +KSY+ L
Sbjct: 74  LQPAELWQESGRWNDYGPELMRLKD-----RASRDFALGPTHEEVITALLRDEVKSYKRL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKD 417
           P+ L +  + +R+E      GL+R R F   DA+ F  T E +      +H    +I+  
Sbjct: 129 PLTLYQIQTKFRDEKRPRF-GLLRGREFIMKDAYSFHATSESLDEVYNLMHQAYSNIFTR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAE 445
            G E   V   +       S      +E
Sbjct: 188 CGLEFRSVIADSGSIGGNESKEFMALSE 215


>gi|319892279|ref|YP_004149154.1| Prolyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03]
 gi|317161975|gb|ADV05518.1| Prolyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03]
          Length = 567

 Score =  136 bits (342), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 47/220 (21%), Positives = 97/220 (44%), Gaps = 11/220 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        E+E   H+ L +      I ++ +GV  +     ++   +   +R++
Sbjct: 4   SKVFIPTLREVPAEAEAISHQLLLKAG---LIKQNAAGVYSYLPVATRVIHKISDIIRQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++  D  E+  P +    LW++SG WD+Y   +  ++      ++ R FAL P +     
Sbjct: 61  MERIDAVEVVMPVLQQSELWKESGRWDAYGMELMRLRD-----RNQREFALGPTHEEVVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           ++    L+SY++LP+ L +  + +R+E      GL+R R F   DA+ F T E+   E  
Sbjct: 116 SLVRDELRSYKQLPLTLFQIQTKFRDEKRPRF-GLLRGREFIMKDAYSFHTDEESLMETY 174

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
           + ++N   +I+K  G     V   +       +      +
Sbjct: 175 QNMYNAYSTIFKRVGLNVRPVVADSGAIGGNHTHEFHALS 214



 Score = 80.6 bits (197), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 26/152 (17%), Positives = 53/152 (34%), Gaps = 9/152 (5%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL---SPIQ 554
           +         A  +N    +   + +     G       I+ ++   N  +W    +P  
Sbjct: 414 LGEKYSEAMKATVLNQQG-REQNLTMGCYGIGVSRTLSAIIEQHHDDNGIIWPKSVTPFD 472

Query: 555 AIVT---TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
             +             A  + + L      +  D RNE    K  +  +  IP+ ++ G 
Sbjct: 473 VHLISVNPKKDEQRACADRLYDQLLGT-YDVLYDDRNERAGVKFNDADLIGIPVRVVVG- 530

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           K ASE  + ++R  +  ++ V + D +  L K
Sbjct: 531 KNASEGIVEVKRRDTGDSEDVHVNDLVTHLEK 562


>gi|239817181|ref|YP_002946091.1| prolyl-tRNA synthetase [Variovorax paradoxus S110]
 gi|259511631|sp|C5CXW9|SYP_VARPS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|239803758|gb|ACS20825.1| prolyl-tRNA synthetase [Variovorax paradoxus S110]
          Length = 581

 Score =  136 bits (342), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 46/243 (18%), Positives = 91/243 (37%), Gaps = 27/243 (11%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   HR + R   +  +   G+G+  +   G ++ + + + +R ++      E+  P 
Sbjct: 17  DAEVASHRLMMRAGMIKKL---GTGIYTYMPMGLRVIRKVEAIVREEMNRAGAVELTMPV 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V     WQ++G +D     +  +K   D     R F ++P +      +    ++SY++L
Sbjct: 74  VQPAEFWQETGRFDKMGPELLRIKDRHD-----RDFVVQPTSEEVVTDIARQEIRSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKD 417
           P    +  + +R+E      GLMR R F   DA+ F    +        + +    I+  
Sbjct: 129 PKNFYQIQTKFRDERRPRF-GLMRGREFIMKDAYSFDRDLDAAKASYQAMADAYRRIFDR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           FG      +        +G D         +      I  + +D I        G+ Y  
Sbjct: 188 FGL---RYRAVAADSGAIGGD---------LSEEFQVIAATGEDAIVY----CPGSDYAA 231

Query: 478 KFE 480
             E
Sbjct: 232 NME 234



 Score = 75.2 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 25/155 (16%), Positives = 45/155 (29%), Gaps = 12/155 (7%)

Query: 497 QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN----LPLWLS 551
            V                 E   P  +    +G  I R     IE          P  L+
Sbjct: 422 HVFVLGTKYSKDMNATYLDEAGKPQFLEMGCYGIGITRLPAAAIEQNHDERGIIWPDALA 481

Query: 552 PIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIII 607
           P   +V  I    +      A+ +   L +  + +  D R E       +  +  +P  +
Sbjct: 482 PFTVVVCPIGMDRSPEVKVAAEALYEQLLAAGVDVLLDDRGERPGAMFADWELIGVPHRV 541

Query: 608 ICGDKEASERSIGIRRFGSTTTQKVS---LLDAIP 639
           +  D+   E  +  +    T   KV    + + I 
Sbjct: 542 VISDRGLKEGQLEYQHRRDTAATKVPAAGIAEFIA 576


>gi|110770771|ref|XP_001123266.1| PREDICTED: translation initiation factor IF-3-like, partial [Apis
           mellifera]
          Length = 283

 Score =  136 bits (342), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 43/101 (42%), Positives = 68/101 (67%)

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + G+ PLWL+P+Q +V TI +    YA+E+  LLK+  + +E D RNE IN KIREHS++
Sbjct: 2   YAGHFPLWLAPVQVVVATIVNDVENYAREVVALLKAQGIRVELDDRNEKINAKIREHSLQ 61

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +P+I++ G KEA ER + +RR G  + + ++L +A+  L 
Sbjct: 62  HVPVILVIGRKEAEERHLAVRRLGGKSQEIMALNEAMDQLR 102


>gi|172057852|ref|YP_001814312.1| prolyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
 gi|226701289|sp|B1YI68|SYP_EXIS2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|171990373|gb|ACB61295.1| prolyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
          Length = 566

 Score =  136 bits (342), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 46/220 (20%), Positives = 91/220 (41%), Gaps = 11/220 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++E   H+ L R      + ++ +G+  +     ++   + + +R++
Sbjct: 4   SKLFMPTLREVPSDAEAISHQLLLRAG---FMRQNAAGIYSYLPLAKRVLSKIETIIRQE 60

Query: 287 IK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++    +E+  P +    LW+++G WD Y   +  +    D     R FAL   +     
Sbjct: 61  MEGAGAQELLMPAIQPAELWEETGRWDIYGPELMRLTDRHD-----RRFALGATHEELIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNEC 404
           ++    L SY++LPV L +    YR+E      GL+R R F   DA+ F  T+E +  E 
Sbjct: 116 SIVRDELNSYKKLPVNLFQIQMKYRDERRPRF-GLLRGREFIMKDAYSFHSTQESLEEEY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
             + +    I+   G E   V   +      G+      A
Sbjct: 175 QNMFDAYTKIFTRVGLEFRPVVADSGAIGGSGTHEFHALA 214



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 19/136 (13%), Positives = 50/136 (36%), Gaps = 7/136 (5%)

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL---SPIQAIVTTIT---SSAVE 566
               K  P+++     G       ++ +++     +W    +P    +  +    +  +E
Sbjct: 425 DEGGKAQPLIMGCYGIGVSRTMSAVVEQHYDERGIIWPKAIAPFDVHLIAVNGKNAEQLE 484

Query: 567 YAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS 626
            A+ +   L +   S+  D R E    K  +  +  +P+ I  G K A +  + ++    
Sbjct: 485 VAETVYRELTAAGFSVLFDDRKERAGVKFADADLIGLPVRINVGKK-APDGIVELKARRG 543

Query: 627 TTTQKVSLLDAIPILT 642
              +++   D +  + 
Sbjct: 544 GEAEEIQQADLLEAVR 559


>gi|120403299|ref|YP_953128.1| prolyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1]
 gi|152112935|sp|A1T7H2|SYP_MYCVP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|119956117|gb|ABM13122.1| prolyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1]
          Length = 585

 Score =  136 bits (342), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 56/370 (15%), Positives = 118/370 (31%), Gaps = 43/370 (11%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +  +   G G+  W   G K+ + + + +R ++     +EI  P 
Sbjct: 19  DAEVPSHKLLIRAGYVRPV---GPGLYSWLPLGLKVLRKIENIVRNEMNAIGGQEILFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++ +  W  Y   +F ++   +       + L P +             SY++ 
Sbjct: 76  LLPRAPYETTNRWTEYGDTLFRLQDRRNN-----DYLLGPTHEEMFTLTVKGEYSSYKDF 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+RL +  + YR+E      G++R R F   D++ F   +         H        D 
Sbjct: 131 PLRLYQIQNKYRDEARPR-AGILRGREFLMKDSYSFDIDDDGLKNAYIAHREAYQRIFDL 189

Query: 419 ------------GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
                       G            E  VG D      ++     ++ +     + I++ 
Sbjct: 190 LKVRYVIVSAVSGAMGGSASEEFLAESDVGEDTYVRCLQSGYAANVEAVVTMVPEPISSE 249

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
            + G  +             +       TI    +  +  +     + ++    VM+   
Sbjct: 250 QIAGLAS-----------ATVHHTGDTPTIATLVDWANGADLGRTVTAADTLKNVMLKVR 298

Query: 527 VFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIA-----NLLKS 577
             G     +G+ +    E     L   L P         +    Y   +        L +
Sbjct: 299 EPGGEWELLGVGVPGDREVDDKRLGAALEP-AEYAMLDDADFARYPFLVKGYIGPKALLA 357

Query: 578 HHLSIETDFR 587
           + +    D R
Sbjct: 358 NGVRYLVDPR 367



 Score = 86.4 bits (212), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 25/161 (15%), Positives = 60/161 (37%), Gaps = 10/161 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G + Q+       F A  +  + +     M    +   + R + ++ E     L 
Sbjct: 422 RGIEIGHVFQLGRKYADAFGADVLGENGKPVRLTMGSYGI--GVSRLVAVIAEQHHDELG 479

Query: 548 L-WLSPI-----QAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           L W S +       ++    + A   A E+A  L    + +  D R  +   K ++  + 
Sbjct: 480 LRWPSTVSPFDVHVVIANKDADARTGATELAAELDRLGVDVLLDDRTASPGVKFKDAELL 539

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +P I++ G +  ++  + +R        ++ +  A   ++
Sbjct: 540 GVPWIVVVG-RGWADGIVELRDRFGGDKHEIPVDGAAERIS 579


>gi|152976185|ref|YP_001375702.1| prolyl-tRNA synthetase [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|189083487|sp|A7GRE9|SYP_BACCN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|152024937|gb|ABS22707.1| prolyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98]
          Length = 566

 Score =  136 bits (342), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 46/203 (22%), Positives = 88/203 (43%), Gaps = 11/203 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R +++     E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPLGLKVLHKVEHIIREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K  +D     R FAL   +      +    +KSY++L
Sbjct: 74  LQAAELWQESGRWYSYGSELMRMKDRND-----REFALGATHEEVITDLVRDEIKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKD 417
           P+ L +  + +R+E      GL+R R F   DA+ F  T+E +     ++     +I+  
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEVYDRLFQAYSNIFAR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDAL 440
            G     V   +       +   
Sbjct: 188 CGLNFRAVIADSGAMGGKDTHEF 210



 Score = 77.9 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 59/157 (37%), Gaps = 11/157 (7%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G +  +        NA +++ +  K  P+++     G   R +  + E F     
Sbjct: 404 RGIEVGHVFKLGTRYSEAMNATFLDENG-KTKPLIMGCYGIGVS-RTVAAIAEQFNDENG 461

Query: 546 --LPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              P  ++P    V  +   +    E A+ I   L+     +  D R E    K  +  +
Sbjct: 462 LVWPKAVAPFHVHVIPVNMKSDVQREVAENIYTSLQEQGYEVLLDDRTERAGVKFADADL 521

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
             +P+ +  G K A E  + ++   +  + +V + D 
Sbjct: 522 FGLPVRVTVGKK-ADEGIVEVKVRATNESAEVKVEDL 557


>gi|323464624|gb|ADX76777.1| prolyl-tRNA synthetase [Staphylococcus pseudintermedius ED99]
          Length = 567

 Score =  136 bits (342), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 47/220 (21%), Positives = 97/220 (44%), Gaps = 11/220 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        E+E   H+ L +      I ++ +GV  +     ++   +   +R++
Sbjct: 4   SKVFIPTLREVPAEAEAISHQLLLKAG---LIKQNAAGVYSYLPVATRVIHKISDIIRQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++  D  E+  P +    LW++SG WD+Y   +  ++      ++ R FAL P +     
Sbjct: 61  MERIDAVEVVMPVLQQSELWKESGRWDAYGMELMRLRD-----RNQREFALGPTHEEVVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           ++    L+SY++LP+ L +  + +R+E      GL+R R F   DA+ F T E+   E  
Sbjct: 116 SLVRDELRSYKQLPLTLFQIQTKFRDEKRPRF-GLLRGREFIMKDAYSFHTDEESLMETY 174

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
           + ++N   +I+K  G     V   +       +      +
Sbjct: 175 QNMYNAYSTIFKRVGLNVRPVVADSGAIGGNHTHEFHALS 214



 Score = 80.6 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 26/152 (17%), Positives = 53/152 (34%), Gaps = 9/152 (5%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL---SPIQ 554
           +         A  +N    +   + +     G       I+ ++   N  +W    +P  
Sbjct: 414 LGEKYSEAMKATVLNQQG-REQNLTMGCYGIGVSRTLSAIIEQHHDDNGIIWPKSVTPFD 472

Query: 555 AIVT---TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
             +             A  + + L      +  D RNE    K  +  +  IP+ ++ G 
Sbjct: 473 VHLISVNPKKDEQRACADRLYDQLLGT-YDVLYDDRNERAGVKFNDADLIGIPVRVVVG- 530

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           K ASE  + ++R  +  ++ V + D +  L K
Sbjct: 531 KNASEGIVEVKRRDTGDSEDVHVNDLVTHLEK 562


>gi|240047193|ref|YP_002960581.1| prolyl-tRNA synthetase [Mycoplasma conjunctivae HRC/581]
 gi|239984765|emb|CAT04739.1| Prolyl-tRNA synthetase [Mycoplasma conjunctivae]
          Length = 480

 Score =  136 bits (342), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 54/418 (12%), Positives = 138/418 (33%), Gaps = 57/418 (13%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
            ++   + +  +  + +L         +      G+ I+ ++   +    ++   + +  
Sbjct: 10  WKQDFAKWYVDVITQAELMSYGPVKGTMYL-KPNGYAIWSSIQDVLNFIFQELSIKNVYF 68

Query: 297 PQVLDQHL-WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P ++ Q    ++  H   +   +  +    +       + L+P +       F   +   
Sbjct: 69  PSLIPQSFIEKEKQHVKGFAPELLTITHVGEKKLPENIY-LRPTSEVLFADFFKKEIAHK 127

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISI 414
            +LP+ L ++  V R E   + +  +R   F   + H          +  K +      I
Sbjct: 128 NKLPILLNQWCQVTRWEK--TTNPFLRTTEFLWQEGHTVHEDSSKAKKFAKIMIENYKFI 185

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            + F    ++V   T+ E+  G                                    A 
Sbjct: 186 VEKFLAIPVIVGKKTQKERFAG------------------------------------AK 209

Query: 475 YGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
                E ++KD  GR  Q GT      N    F+  + N  ++  +   +++  +G   R
Sbjct: 210 TTYTIEAMMKD--GRALQAGTSHYLGQNFSKNFDITFKNKDNQLEY---VYQTSWGVSTR 264

Query: 534 FIGIMIENFKGN----LPLWLSPIQAIVTTITSSAVEYAQ----EIANLLKSHHLSIETD 585
            IG +I     +    +P  ++  +  +     +     +    ++++ L   H++   D
Sbjct: 265 LIGALIMTHGDDRGIIIPPAIAEYKVDILAFFVNKHPNLKKAILKLSDELDDFHITNRVD 324

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             +  + +KI    +   P+ I  G ++   + + + R  +   + V     +  L +
Sbjct: 325 LSDNQVGFKIANSEVLGTPVRIEIGPRDLEAKQVVVVRRDTLEKKIVPTSQIVNHLEQ 382


>gi|239636259|ref|ZP_04677261.1| prolyl-tRNA synthetase [Staphylococcus warneri L37603]
 gi|239597614|gb|EEQ80109.1| prolyl-tRNA synthetase [Staphylococcus warneri L37603]
          Length = 567

 Score =  136 bits (342), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 52/243 (21%), Positives = 98/243 (40%), Gaps = 11/243 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        E+E   HR L +      I +  SG+  +     ++   +   +R +
Sbjct: 4   SKVFIPTMREVPAEAEALSHRLLLKAG---LIKQSTSGIYSYLPLATRVLNNISKIIREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++  D  EI  P +    LW++SG W +Y   +  +K      ++ R FAL P +     
Sbjct: 61  MEKVDAVEILMPALQQAELWEESGRWGAYGPELMRLKD-----RNGREFALGPTHEEVVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           ++    LKSY+ LP+ L +  S +R+E      GL+R R F   DA+ F   E   +E  
Sbjct: 116 SLVRDELKSYKRLPLTLFQIQSKFRDEQRPRF-GLLRGREFIMKDAYSFHADEASLDETY 174

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
           + ++N    I+K  G     V   +       +      +E     ++ + ++     I 
Sbjct: 175 QDMYNAYDRIFKRVGINARPVVADSGAIGGNHTHEFMALSEIGEDTIVYSNESDYAANIE 234

Query: 465 TGV 467
              
Sbjct: 235 KAE 237



 Score = 71.7 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 18/152 (11%), Positives = 57/152 (37%), Gaps = 9/152 (5%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQA-- 555
           +        NA ++++   K  P+++     G       I+ ++   N  +W   +    
Sbjct: 413 LGTKYSESMNATFLDNQG-KAQPLIMGCYGIGVSRTLSAIVEQHHDDNGIIWPKSVTPFD 471

Query: 556 ----IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
                +        +   ++ + L ++   +  D R E    K  +  +  +P+ ++ G 
Sbjct: 472 LHLITINPKKEEQRKLGDQLYDQLMNN-YDVLYDDRQERAGVKFNDADLIGLPLRVVVGK 530

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           + A E  + +++  +  ++++ + D    +  
Sbjct: 531 R-AEEGIVEVKQRSTGESEEIHIDDLENYIKD 561


>gi|308233721|ref|ZP_07664458.1| prolyl-tRNA synthetase [Atopobium vaginae DSM 15829]
          Length = 575

 Score =  136 bits (342), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 44/181 (24%), Positives = 80/181 (44%), Gaps = 10/181 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++           +++   H+ L R   +    +  +G+  +    W+  Q + S +R +
Sbjct: 8   SKLYAPTLKEDPTDADIASHKLLVRAGMIR---KAAAGLYSYLPLAWRSIQKIESIIREE 64

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++  D +E+  P + D  LW QSG W +Y   +  +    D       +AL P +     
Sbjct: 65  MEAIDAQEMLAPILTDAELWHQSGRWGAYGPELMRLTDRHDH-----EYALGPTHEETFT 119

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +  + LKSY++LPV L      +R+E      GLMR R F   D + FC  ++  +EC 
Sbjct: 120 DLIRNELKSYKDLPVTLYHIQDKFRDERRPRF-GLMRGREFIMKDGYSFCANQESLHECY 178

Query: 406 K 406
           +
Sbjct: 179 E 179



 Score =  101 bits (251), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 28/178 (15%), Positives = 62/178 (34%), Gaps = 8/178 (4%)

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
            P     LK A G +      Q+         A +++    +  P ++     G      
Sbjct: 393 CPCCSAALKSARGIEIS-QVFQLGTKYSKAMGATFMDEDGTEK-PFIMGCYGIGVSRTLA 450

Query: 536 GIMIENFKGNLPLWL---SPIQAIVTT---ITSSAVEYAQEIANLLKSHHLSIETDFRNE 589
            ++ ++   +  +W    +P +  V        +    AQ +A  L    + +  D R E
Sbjct: 451 AVVEQSHDEHGIIWPVSVAPYEVAVIPLDVHDETVWPVAQRLAEGLIKAGIEVIVDDRGE 510

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLP 647
               K  +  +   P  ++CG K  +   + ++   +    +V + + +  L  E +P
Sbjct: 511 RPGIKFNDADLMGFPYQVVCGKKALAHACVEVKNRATGERTEVPVDEVVDHLVHEIVP 568


>gi|323701681|ref|ZP_08113353.1| phosphoribulokinase/uridine kinase [Desulfotomaculum nigrificans
           DSM 574]
 gi|323533454|gb|EGB23321.1| phosphoribulokinase/uridine kinase [Desulfotomaculum nigrificans
           DSM 574]
          Length = 555

 Score =  136 bits (342), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 50/211 (23%), Positives = 90/211 (42%), Gaps = 4/211 (1%)

Query: 1   MPSDIKLTFPDGSIK-NFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGS 58
           M + IK+   DG             D+ +  ++      VA  IN  + DL   +  E  
Sbjct: 1   MENFIKVHV-DGEKTYEIAPGTPVLDLLKLETQERKYPVVAAIINNTLQDLRTEISEECE 59

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           I  +       + V   S   ++  A+  + P     I   + +G Y + + ++P    +
Sbjct: 60  IRFVDLTSEHGIRVYHRSATMLLMRAIAEVLPGSTAIIQHSLGNGLYGEINYDKPLKDRD 119

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           + +IE++M  II  D P +++ +S + A  LF       K+++L  +P  E V +Y  G 
Sbjct: 120 ITRIERQMGYIIEADEPMVRKKVSKKDAERLFTEAGLVEKIDLLSYLP-GEEVEIYCCGG 178

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWR 209
           ++D   GP V STG +K+F     + G    
Sbjct: 179 FYDFYNGPLVPSTGYIKQFRLRFYLPGFILE 209


>gi|39996560|ref|NP_952511.1| prolyl-tRNA synthetase [Geobacter sulfurreducens PCA]
 gi|81832056|sp|Q74D59|SYP_GEOSL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|39983441|gb|AAR34834.1| prolyl-tRNA synthetase [Geobacter sulfurreducens PCA]
 gi|298505576|gb|ADI84299.1| prolyl-tRNA synthetase [Geobacter sulfurreducens KN400]
          Length = 570

 Score =  136 bits (342), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 49/252 (19%), Positives = 92/252 (36%), Gaps = 14/252 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           T   +        ++E   H+ + R   +  +A    G+  +   G +  + + + +R +
Sbjct: 4   TNYFIPTLKETPSDAEVVSHQLMLRAGMIRKLAA---GIYNYLPLGLRSIRKVETIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P V    LWQ+S  W+ Y   +   K   D       F L P +     
Sbjct: 61  MDRAGAIELLMPSVQPAELWQESTRWEQYGKELLRFKDRKDA-----EFCLGPTHEEVVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    +KSYR++P  L +  + +R+E      GLMR R F   DA+ F       +   
Sbjct: 116 DIVRREVKSYRQMPFNLYQIQAKFRDEIRPRF-GLMRGREFIMKDAYSFDVDSSASDLSY 174

Query: 406 -KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALW---DDAENIMKGVLDTIKNSSQD 461
            K++     I++  G +   V+  T       S       D  E+ +         ++ +
Sbjct: 175 DKMYQAYRRIFQRCGLKFRAVEADTGSIGGSSSHEFMVLADSGEDAIVSCTQCEYAANVE 234

Query: 462 RINTGVLLGEGA 473
           +        E A
Sbjct: 235 KAEARPAPAEHA 246



 Score = 82.1 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 26/164 (15%), Positives = 66/164 (40%), Gaps = 12/164 (7%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN- 545
           R  + G +  +         A Y+++  ++    +I    +G  I R +   IE      
Sbjct: 402 RGIEVGHVFKLGTKYSEALRATYLDADGKEQ---IIFMGCYGIGISRTVAACIEQNHDAD 458

Query: 546 ---LPLWLSPIQAIVTTITSSAVEY---AQEIANLLKSHHLSIETDFRNETINYKIREHS 599
               P+ ++P   IV+ + +   E     + +   L++  + +  D R+E    K ++  
Sbjct: 459 GIIFPIPIAPFHCIVSAVNTKDAEVMAACESLYLDLRAAGVEVLFDDRDERPGIKFKDAD 518

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  IP+ ++ G K  ++  + ++   +   + + L  A+  +  
Sbjct: 519 LIGIPLRLVVGSKNLADGKVELKSRRTGEVELLPLAGAVEKVRN 562


>gi|256832247|ref|YP_003160974.1| prolyl-tRNA synthetase [Jonesia denitrificans DSM 20603]
 gi|256685778|gb|ACV08671.1| prolyl-tRNA synthetase [Jonesia denitrificans DSM 20603]
          Length = 594

 Score =  136 bits (342), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 42/203 (20%), Positives = 85/203 (41%), Gaps = 11/203 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   HR L R   +        G+  W   G ++   + + +R +++    + ++ P 
Sbjct: 19  DAEVASHRLLVRAGYIR---RAAPGIYSWLPLGLRVLDKVDAVVREEMERAGAQRVHFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++ +G W  Y  N+F ++   D       + L P +      +      SY++L
Sbjct: 76  LLPREPYEATGRWTEYGPNLFRLQDRKDG-----DYLLAPTHEEMFTLLVKDLYSSYKDL 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKD 417
           PV L +  + YR+E      GL+R R F   DA+ F   E+   E  +        I++ 
Sbjct: 131 PVTLYQIQTKYRDEARPR-AGLIRGREFIMKDAYSFDLTEEGLAESYRAQRDAYERIFRR 189

Query: 418 FGFEKIMVKLSTRPEKRVGSDAL 440
            G + ++V  ++       S+  
Sbjct: 190 LGLDYVIVAATSGAMGGSRSEEF 212



 Score = 78.7 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 61/163 (37%), Gaps = 12/163 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG--- 544
           R  + G I Q+            ++ + +     M    +   + R +  + +       
Sbjct: 426 RGIEIGHIFQLGRKYAEALGLKVLDVNGKHTTVTMGSYGI--GVTRVMAALAQAHHDSQG 483

Query: 545 -NLPLWLSPIQAIVTTITSSA--VEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSI 600
              P+ ++P    +      A   E A+ +A  L    + +  D R + +   K ++  +
Sbjct: 484 LAWPIQVAPAHVHLVATGKDARIFEAAESLAQRLSDRGVEVIYDDRVKVSPGVKFKDAEL 543

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             +P I++ G +   E +I  R       Q+V + DA+ ++T 
Sbjct: 544 FGVPFIVVVG-RGLDEGTIEFRTR-VGEPQQVHINDAVDVVTD 584


>gi|116075299|ref|ZP_01472559.1| prolyl-tRNA synthetase [Synechococcus sp. RS9916]
 gi|116067496|gb|EAU73250.1| prolyl-tRNA synthetase [Synechococcus sp. RS9916]
          Length = 600

 Score =  136 bits (342), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 53/230 (23%), Positives = 97/230 (42%), Gaps = 8/230 (3%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +  +   GSG+  +    W++ + + + +++++      E   PQ
Sbjct: 17  DAEIASHQLLLRGGYIRRV---GSGIYAYLPLMWRVLRKISAIVQQEMDATGALETLLPQ 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW++SG W  Y A    +   +D  +  R   L P +     ++    L+SYR+L
Sbjct: 74  LQPAELWERSGRWQGYTAGEGIMFHLED--RQGRQVGLGPTHEEVVTSLAGELLRSYRQL 131

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL-IISIYKD 417
           PV + +  + +R+E      GLMR R F   DA+ F   EQ    C    +L    I++ 
Sbjct: 132 PVTVYQIQNKFRDEIRPRF-GLMRGREFIMKDAYSFHADEQDLGRCYGEMDLAYRRIFER 190

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGV 467
            G + + V+  +       S      AE     +L +   S    +   V
Sbjct: 191 CGLQAVAVEADSGAIGGAASQEFMVTAEAGEDLILTSEDGSYAANLEKAV 240



 Score = 93.7 bits (231), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 26/164 (15%), Positives = 65/164 (39%), Gaps = 13/164 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN- 545
           R  + G I Q+        +A +  +   +          +G  + R     +E      
Sbjct: 430 RGIEVGHIFQLGRKYSQAMDATFTTAEGGQDA---FWMGCYGIGVSRLAQAAVEQHHDKA 486

Query: 546 ---LPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
               PL ++P Q ++        + ++  +++ + L++  + +  D R+E    K ++  
Sbjct: 487 GICWPLAIAPFQVVIVVANMQDDTQLQLGEQLYSTLQASGIDVLLDDRSERAGVKFKDAD 546

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  IP  ++ G ++A+   + +    +  TQ +   +AI  L +
Sbjct: 547 LIGIPWRLVVG-RDAANGQVELVERATRDTQVLPHAEAITALRQ 589


>gi|229025259|ref|ZP_04181679.1| Prolyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228736012|gb|EEL86587.1| Prolyl-tRNA synthetase [Bacillus cereus AH1272]
          Length = 566

 Score =  136 bits (342), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 46/208 (22%), Positives = 91/208 (43%), Gaps = 11/208 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R +++     E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K      ++ R FAL   +      +    +KSY++L
Sbjct: 74  MQAAELWQESGRWYSYGSELMRMKD-----RNAREFALGATHEEVITDLVRDEVKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKD 417
           P+ L +  + +R+E      GL+R R F   DA+ F  T+E +     +++    +I+  
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEVYDRLYKAYSNIFAR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAE 445
            G     V   +       +      +E
Sbjct: 188 CGLNFRAVIADSGAMGGKDTHEFMVLSE 215



 Score = 79.1 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 61/157 (38%), Gaps = 11/157 (7%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G +  +        NA +++ +  K  P+++     G   R +  + E F     
Sbjct: 404 RGIEVGHVFKLGTRYSEAMNATFLDENG-KTKPLIMGCYGIGVS-RTVAAIAEQFNDENG 461

Query: 546 --LPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              P  ++P    V  +   + +  E  + I N L+     +  D R E    K  +  +
Sbjct: 462 LVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERAGVKFADADL 521

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
             +P+ +  G K A E  + ++   +  +++V + + 
Sbjct: 522 FGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEEL 557


>gi|282877866|ref|ZP_06286677.1| phosphoribulokinase/Uridine kinase family protein [Prevotella
           buccalis ATCC 35310]
 gi|281300013|gb|EFA92371.1| phosphoribulokinase/Uridine kinase family protein [Prevotella
           buccalis ATCC 35310]
          Length = 553

 Score =  136 bits (342), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 43/217 (19%), Positives = 91/217 (41%), Gaps = 3/217 (1%)

Query: 1   MPSDIKLTFPDGSIKN-FPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-S 58
           M   +++   +        + +T SDV +  +  +    +   +N KV  ++  +     
Sbjct: 1   MKQVLQICCKNNKKTQDVAIGSTLSDVFKQFNLKMPYGPICARVNNKVVGMNYQLYHNKD 60

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           +E +   D  +      +   I+ +AV  ++P  +V I   +  G+Y +    +  + ++
Sbjct: 61  VEFLDMHDASASRNYTRTLFFILCKAVHDLYPGSRVVIDIPVSKGYYINLHIGREVTDED 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
             +I ++MQ+II    P  +  +  E+A  +FE K +  KV++L S+ +   V  YR  +
Sbjct: 121 ATRIRERMQQIIDEKIPIERFEVRTEEAIRMFEQKGDEAKVKLLRSVGSLYTV-YYRIDD 179

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRP 215
           + D   G  + +T  +  F       G   R  S   
Sbjct: 180 YVDYYYGALLTNTSDIYLFGLERYFEGLLLRIPSKHD 216


>gi|296139421|ref|YP_003646664.1| prolyl-tRNA synthetase [Tsukamurella paurometabola DSM 20162]
 gi|296027555|gb|ADG78325.1| prolyl-tRNA synthetase [Tsukamurella paurometabola DSM 20162]
          Length = 585

 Score =  136 bits (342), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 64/390 (16%), Positives = 125/390 (32%), Gaps = 47/390 (12%)

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISY 282
               +Q  L        ++E   H+ L R   +  IA    GV  W   G ++ + +   
Sbjct: 2   ITRFSQLFLRTLRDDPADAEVPSHKLLVRAGYVRRIA---PGVYSWLPLGLRVLRNVEHV 58

Query: 283 MRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           +R ++     +EI  P +L +  ++ +  W  Y  ++F ++      +      L P + 
Sbjct: 59  VREEMNAIGGQEILLPALLPREPYETTNRWTEYGDSLFRLQD-----RKGADMMLGPTHE 113

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
                       SY++LPV L +  + YR+E      G++R R F   D++ F T ++  
Sbjct: 114 EIFALTVKGEYNSYKDLPVILYQIQNKYRDEERPR-AGILRGREFVMKDSYSFDTSDEGL 172

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR------------VGSDALWDDAENIMK 449
           +E    H             + ++  +T                 VG D      E+   
Sbjct: 173 SEAYAKHRAAYQRIFARLAIEHVIVSATSGAMGGSASEEFLAVSPVGEDTYVHSTESDYA 232

Query: 450 GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAF 509
             ++ +   +   I    L     +  P  +    D +          V +       A 
Sbjct: 233 ANVEAVVTPAPPAIPLDGLPAAQVYDTP--DTPTIDTL----------VAWANQGADGAS 280

Query: 510 YVNSH---SEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITS 562
            +       +    VM+     G     +G+ I    E     L   L P +  +     
Sbjct: 281 ILGREVTAGDTLKNVMVKTREPGGEWELLGVGIPGDREVDFKRLEASLEPTEVALIE-AE 339

Query: 563 SAVEYAQEIA-----NLLKSHHLSIETDFR 587
              +Y   +        L+ + +    D R
Sbjct: 340 DFEKYPFLVKGYIGPKALQQNEVRYLVDPR 369



 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 65/161 (40%), Gaps = 11/161 (6%)

Query: 484 KDAIGRDWQCGTIQVDFNLP---SRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMI 539
            D  G       I++           +AF V+   E   PV + +  +G  + R + ++ 
Sbjct: 414 PDGRGTLVSARGIEIGHIFQLGRKYTDAFEVDVLGENGKPVRLTQGSYGIGVSRLVAVIA 473

Query: 540 ENFKGNLPL-WL---SP--IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           E    +  L W    +P  +  ++      A   A+ +A  L +  L +  D R  +   
Sbjct: 474 EQQHDDKGLRWPKGVAPFDVHVVIANKDEGAWTGAESLAAELDAAGLQVLLDDRKASPGI 533

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           K ++  +  +P +++ G +  ++  + +R   +  ++++ +
Sbjct: 534 KFKDSELLGVPTVVVVG-RGWADGVVELRDRLTGESREIPV 573


>gi|327441016|dbj|BAK17381.1| prolyl-tRNA synthetase [Solibacillus silvestris StLB046]
          Length = 568

 Score =  136 bits (342), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 47/221 (21%), Positives = 91/221 (41%), Gaps = 11/221 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           T+  +        +++ + HR L R      I ++ +GV  +     ++   +   +R +
Sbjct: 4   TKTFIPTLRENPSDADVKSHRMLLRAG---FIRQNAAGVYSYLPLARRVLSKIEQIIREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++  +  E+  P +    LWQ+SG W++Y   +  +K   D     R FAL   +     
Sbjct: 61  MEAINSIELLMPALQPAELWQESGRWEAYGPELMRLKDRHD-----RDFALGATHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +    +KSY++LP+ L +  S +R+E      GL+R R F   DA+ F +  E +    
Sbjct: 116 TLVRDEIKSYKKLPLTLYQIQSKFRDEKRPRF-GLLRGREFIMKDAYSFHSSRESLDATY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
             ++    +I+   G     V          G+      +E
Sbjct: 175 DDMYRAYSNIFTRLGLNFRAVIADAGTIGGKGTHEFMVLSE 215



 Score = 74.4 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 63/153 (41%), Gaps = 10/153 (6%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPI 553
           +      + NA +++    K  P ++     G   R +  + E+F+       P  L+P 
Sbjct: 414 LGTTYSEKLNATFLDEQG-KAKPYIMGCYGIGVS-RILAAVAEHFQDENGFVWPAQLAPY 471

Query: 554 QAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
              +  +     + V+ A E+  +LKS+   +  D R E    K  +  +  +P+ I  G
Sbjct: 472 DLQLVPVNAKDEAQVQLADELYGVLKSYRYEVLYDNRAERAGVKFADADLIGLPVRITVG 531

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            K ASE  + ++   +  + + +  + +  L +
Sbjct: 532 KK-ASEGLVEVKFRSTGESAEWAKEEVVDRLNE 563


>gi|323481345|gb|ADX80784.1| prolyl-tRNA synthetase [Enterococcus faecalis 62]
          Length = 572

 Score =  136 bits (342), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 48/254 (18%), Positives = 100/254 (39%), Gaps = 16/254 (6%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++E   H+ L R   +  +A    G+  +     ++ + L + MR +
Sbjct: 4   SKMLIPTLREVPNDAEVLSHQILLRAGYIRQVAA---GIYSYLPLANRVLEKLKAIMREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +  D  E+  P +L   LW++SG +++Y  N++ +K  +D     R + L P +     
Sbjct: 61  FEKIDAVEMLMPALLPAELWKESGRYETYGPNLYRLKDRND-----RDYILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    + SY+ LP+ L +  + YR+E      GL+R R F   D + F   E   ++  
Sbjct: 116 ELIRDEINSYKRLPLNLYQIQTKYRDEKRPR-SGLLRGREFIMKDGYSFHADEASLDQSY 174

Query: 406 KIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
           + +      I++  G E   +           S      +E     +  + ++     + 
Sbjct: 175 RDYEKAYSRIFERCGLEFRAIIGDGGAMGGKDSKEFMAISEIGEDTICYSTESDYAANLE 234

Query: 465 TGVLLGEGAFYGPK 478
                   + Y PK
Sbjct: 235 MAT-----SLYTPK 243



 Score = 64.4 bits (155), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 23/140 (16%), Positives = 49/140 (35%), Gaps = 9/140 (6%)

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG----NLPLWLSPIQAIVTTITSS-- 563
            V   + +   V++     G   R +  ++E        N P  ++P    V  +     
Sbjct: 425 TVLDENGREKSVIMGCYGIGVS-RLLSAIVEQNADERGINWPTGIAPFDLHVVQMNVKDE 483

Query: 564 -AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
              + +QE+  ++      +  D RNE    K  +  +   PI I  G K   +  + ++
Sbjct: 484 YQTKLSQEVEAMMTEAGYEVLVDDRNERAGVKFADADLIGCPIRITVGKKAV-DGVVEVK 542

Query: 623 RFGSTTTQKVSLLDAIPILT 642
              +    +V   +    L+
Sbjct: 543 IKRTGEMLEVRKEELESTLS 562


>gi|229174485|ref|ZP_04302017.1| Prolyl-tRNA synthetase [Bacillus cereus MM3]
 gi|228609045|gb|EEK66335.1| Prolyl-tRNA synthetase [Bacillus cereus MM3]
          Length = 566

 Score =  136 bits (342), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 46/208 (22%), Positives = 91/208 (43%), Gaps = 11/208 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R +++     E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K      ++ R FAL   +      +    +KSY++L
Sbjct: 74  MQAAELWQESGRWYSYGSELMRMKD-----RNAREFALGATHEEVITDLVRDEVKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKD 417
           P+ L +  + +R+E      GL+R R F   DA+ F  T+E +     +++    +I+  
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEVYDRLYKAYSNIFAR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAE 445
            G     V   +       +      +E
Sbjct: 188 CGLNFRAVIADSGAMGGKDTHEFMVLSE 215



 Score = 79.1 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 61/157 (38%), Gaps = 11/157 (7%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G +  +        NA +++ +  K  P+++     G   R +  + E F     
Sbjct: 404 RGIEVGHVFKLGTRYSEAMNATFLDENG-KTQPLIMGCYGIGVS-RTVAAIAEQFNDENG 461

Query: 546 --LPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              P  ++P    V  +   + +  E  + I N L+     +  D R E    K  +  +
Sbjct: 462 LVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERAGVKFADADL 521

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
             +P+ +  G K A E  + ++   +  +++V + + 
Sbjct: 522 FGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEEL 557


>gi|317121850|ref|YP_004101853.1| prolyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885]
 gi|315591830|gb|ADU51126.1| prolyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885]
          Length = 586

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 45/221 (20%), Positives = 83/221 (37%), Gaps = 11/221 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  +        E+E   HR + R   +  +    +G+  W   G +    + + +R 
Sbjct: 3   WSRLLIPTLRDDPAEAEIASHRLMLRAGLIRRV---TAGIYEWLPLGRRAVAKVEAIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LW+++G W  Y   M+ +K      +  R + L P +    
Sbjct: 60  EMNRKGGLEVGLPIVQPAELWRETGRWAEYGEEMWRLKD-----RHGREYCLGPTHEEII 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNE 403
             +    + SYR+LP+ L +  + YR+E      G+MR R F   DA+ F    E +   
Sbjct: 115 TDLVRATVSSYRQLPLLLYQIQNKYRDEIRPRF-GVMRAREFVMKDAYSFDVDAEGLERS 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
              + +    I+   G     V          G+      A
Sbjct: 174 YQAMDDAYRRIFSRCGLVFRAVAADPGAIGGSGTHEFMALA 214



 Score = 87.1 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 23/165 (13%), Positives = 55/165 (33%), Gaps = 8/165 (4%)

Query: 486 AIGRDWQCGTIQVDF-NLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           A  R  + G I   +          + ++   +  P+++     G       ++ ++   
Sbjct: 404 ASARGIEVGQIFKLWTKYSEALGCTFKDADG-RERPMVMGCYGIGVTRTVAAVIEQHHDE 462

Query: 545 NLPLWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
              +W    +P  A+V  +        + A+ I   L    +    D R+E    K  + 
Sbjct: 463 KGIIWPMSVAPFHAVVVPVNYNEPDQRQAAERIYGQLVEAGVEAVLDDRDERPGVKFNDA 522

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +   P+ +  G +  +E  + I    +     V +  A   + +
Sbjct: 523 DLIGFPLRVTVGPRGLAEGKVEIVDRATGQADPVPVEHAAAEVAR 567


>gi|228935133|ref|ZP_04097960.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228824498|gb|EEM70303.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
          Length = 566

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 89/203 (43%), Gaps = 11/203 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R +++     E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K      ++ R FAL   +      +    +KSY++L
Sbjct: 74  MQAAELWQESGRWYSYGSELMRMKD-----RNAREFALGATHEEVITDLVRDEVKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKD 417
           P+ L +  + +R+E      GL+R R F   DA+ F  T+E +     +++    +I+  
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEVYDRLYKAYSNIFAR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDAL 440
            G     V   +       +   
Sbjct: 188 CGLNYRAVIADSGAMGGKDTHEF 210



 Score = 79.1 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 61/157 (38%), Gaps = 11/157 (7%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G +  +        NA +++ +  K  P+++     G   R +  + E F     
Sbjct: 404 RGIEVGHVFKLGTRYSEAMNATFLDENG-KTQPLIMGCYGIGVS-RTVAAIAEQFNDENG 461

Query: 546 --LPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              P  ++P    V  +   + +  E  + I N L+     +  D R E    K  +  +
Sbjct: 462 LVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERAGVKFADADL 521

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
             +P+ +  G K A E  + ++   +  +++V + + 
Sbjct: 522 FGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEEL 557


>gi|190572717|ref|YP_001970562.1| prolyl-tRNA synthetase [Stenotrophomonas maltophilia K279a]
 gi|226701342|sp|B2FMR5|SYP_STRMK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|190010639|emb|CAQ44248.1| putative prolyl-tRNA synthetase [Stenotrophomonas maltophilia
           K279a]
          Length = 567

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 48/227 (21%), Positives = 87/227 (38%), Gaps = 14/227 (6%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  L        ++E   HR + R   +  +A   SG+  W   G ++ + +   +R +
Sbjct: 4   SQFHLHTTKETPSDAELTSHRLMLRAGMIRKLA---SGLYTWSPLGLRVLRKVERIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E   P +  + LW+Q+G W  +   +  +K   D     + F   P       
Sbjct: 61  MDRAGAVEFQIPTIQPKELWEQTGRWQKFGPQLLKIKDRKD-----QVFCYSPTAEEAAC 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT-KEQMFNEC 404
                 L SY++LPV   +  + +R+E      G+MR R F   DA+ F    E +  E 
Sbjct: 116 DFARSELSSYKQLPVNFYQVQTKFRDEIRPRF-GVMRSREFLMKDAYSFHLHDECLVREY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALW---DDAENIM 448
             + +    I+   G +  MV+  +       S       D  E+ +
Sbjct: 175 ENMKSAYSRIFTRLGLDFRMVQADSGAIGGDASQEFHVIADSGEDAL 221



 Score = 76.0 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 23/164 (14%), Positives = 54/164 (32%), Gaps = 13/164 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN- 545
           R  + G + Q+        +A  ++ + +     ++    +G  I R +   IE    + 
Sbjct: 406 RGIEVGHVFQLGRKYAEALDATVLDENGKA---AVMAMGCYGIGISRVVAAAIEQNHDDA 462

Query: 546 ---LPLWLSPIQAIVTTITSS----AVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
               P  ++P Q +V  I         + A  +   L+   L    D R         + 
Sbjct: 463 GIIWPDAMAPWQVVVCVINPKGDAAVADAAASLLQELRDAGLDAALDDRGLRPGAMFADM 522

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +  IP  ++  ++     +   R   ++  + +     +  L 
Sbjct: 523 ELIGIPHRVVVSERGLGAGTYEYRSRRASEAESLDKATLLQRLQ 566


>gi|313901629|ref|ZP_07835066.1| prolyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965]
 gi|313468110|gb|EFR63587.1| prolyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965]
          Length = 586

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 46/221 (20%), Positives = 83/221 (37%), Gaps = 11/221 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            T+  +        E+E   HR + R   +  +    +G+  W   G +    + + +R 
Sbjct: 3   WTRLLIPTLRDDPAEAEIASHRLMLRAGLIRRV---TAGIYEWLPLGRRAVVKVETIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LW+++G W  Y   M+ +K      +  R + L P +    
Sbjct: 60  EMNRKGGLEVGLPIVQPAELWRETGRWAQYGEEMWRLKD-----RHGREYCLGPTHEEII 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNE 403
             +    + SYR+LP+ L +  + YR+E      G+MR R F   DA+ F    E +   
Sbjct: 115 TDLVRATVSSYRQLPLLLYQIQNKYRDEIRPRF-GVMRAREFIMKDAYSFDVDAEGLERS 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
              + +    I+   G     V          G+      A
Sbjct: 174 YQAMDDAYRRIFSRCGLVFRPVAADPGAIGGSGTHEFMALA 214



 Score = 87.9 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 20/165 (12%), Positives = 53/165 (32%), Gaps = 8/165 (4%)

Query: 486 AIGRDWQCGTIQVDF-NLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           A  R  + G I   +          + ++  +   P+++     G       ++ ++   
Sbjct: 404 AAARGIEVGQIFKLWTKYSEALGCTFKDADGQ-ERPMVMGCYGIGITRTVAAVIEQHHDE 462

Query: 545 NLPLWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
              +W    +P   +V  +        + A+ +   L    +    D R+E    K  + 
Sbjct: 463 KGIIWPMSVAPYHVVVVPVNYAEPDQRQAAERVYGQLLEAGVEAVLDDRDERPGVKFNDA 522

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +   P+ +  G +   E  + +    +     V +  A   + +
Sbjct: 523 DLIGFPLRVTVGPRGLVEGKVEVVERATGRATPVPVDQAAAEVAR 567


>gi|296394267|ref|YP_003659151.1| prolyl-tRNA synthetase [Segniliparus rotundus DSM 44985]
 gi|296181414|gb|ADG98320.1| prolyl-tRNA synthetase [Segniliparus rotundus DSM 44985]
          Length = 599

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 47/257 (18%), Positives = 97/257 (37%), Gaps = 14/257 (5%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
           +        ++E  +H+ L R   +  ++    GV  W   G K+ + + + +R ++   
Sbjct: 10  VRTLREDPADAEVANHKLLVRGGYVRRVS---PGVFTWLPLGLKVLRQVEAVVREEMDAI 66

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
             +EI  P +  +  ++ S  W  Y  N+F +K      +    + L P +      +  
Sbjct: 67  GAQEILLPALAPRQPYETSNRWTEYGDNLFRLKD-----RKGGDYLLAPTHEELFALIVK 121

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
               SY++LPV L +  + YR+E      G++R R F   DA+ F   E         H 
Sbjct: 122 GEYTSYKDLPVILYQIQTKYRDEERPR-AGILRGREFVMKDAYSFDVDEAGNKAAYHAHR 180

Query: 410 -LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA---ENIMKGVLDTIKNSSQDRINT 465
                I+   G   ++V  ++       S+    ++   E+     L++   ++ + + T
Sbjct: 181 DAYQRIFDRLGVSYVIVAATSGAMGGSASEEFLAESAIGEDTYVRCLESGYAANVEAVAT 240

Query: 466 GVLLGEGAFYGPKFEYI 482
                      P  +  
Sbjct: 241 PPAEPVDFSDAPAAQIH 257



 Score = 66.7 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 59/157 (37%), Gaps = 10/157 (6%)

Query: 484 KDAIGRDWQCGTIQVDFNLP---SRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMI 539
            D  G       I++           +AF V+   E   P  +    +G  + R +G++ 
Sbjct: 408 PDGRGPLVAARGIEIGHVFALGTKYTDAFSVDVLGENGKPARLIMGSYGIGVSRLVGVIA 467

Query: 540 ENF----KGNLPLWLSPIQAIVTTITSS--AVEYAQEIANLLKSHHLSIETDFRNETINY 593
           E +        P  ++P Q  V +        E A+  A  L+SH L +  D R  +   
Sbjct: 468 EQWLDEKGLRWPPQVAPFQVHVLSTGKGGAEAEAAERYAAELESHGLRVLLDDRKASPGV 527

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
           K  +  +   P++++ G   A E  + ++   S  + 
Sbjct: 528 KFADAELLGAPVVVVVGRDWAGEGKVELKERFSGASG 564


>gi|167627536|ref|YP_001678036.1| prolyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|189083499|sp|B0TXX4|SYP_FRAP2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|167597537|gb|ABZ87535.1| prolyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
          Length = 565

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 54/257 (21%), Positives = 97/257 (37%), Gaps = 27/257 (10%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            TQ  +       +E+    H+ + +   +  +A   SG+  W   G K+ Q + + +R 
Sbjct: 3   ATQTLIATTKELPKEAVLTSHQYMLKAGLIKKLA---SGIYTWMPIGLKVLQKIQNIVRE 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P VL   L Q++  WD +   +  +K      +  R F   P +    
Sbjct: 60  EMNKAGASELLLPSVLPSELLQETHRWDKFGPELLKLKD-----RHERDFCYGPTHEEPI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT-KEQMFNE 403
           V +    +KSY++LP+ L +  + +R+E      G+MR R F   DA+ F    E + N 
Sbjct: 115 VDMARDTIKSYKQLPLNLYQIQTKFRDEIRPRF-GVMRAREFIMKDAYSFHENSECLHNT 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             K+H    +I    G     V+  T       S         ++    + I        
Sbjct: 174 YNKMHETYCNILDKIGLVYRPVRADTGAIGGDNSHEF-----QVLANAGEDI-------- 220

Query: 464 NTGVLLGEGAFYGPKFE 480
              +    G+ Y    E
Sbjct: 221 ---ICYSNGSDYAANIE 234



 Score = 77.1 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 22/152 (14%), Positives = 51/152 (33%), Gaps = 8/152 (5%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL---SPIQ 554
           ++       NA  +     K  P+++    FG        + ++   N  +W    +P Q
Sbjct: 415 LEDVYSKPMNANIIGQDG-KSKPMLMGCYGFGVSRVMAAAIEQSHDENGIIWPETIAPYQ 473

Query: 555 AIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
             +  I    + S  + A ++   L    + +  D R         +  +      ++ G
Sbjct: 474 VAILPINYNKSESVKQTADKLYQELLVKGIDVILDDRGARPGVMFADADLIGFSHHVVIG 533

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           D+   +  +  +   +   Q++ L     IL 
Sbjct: 534 DRLLEQGLVEYKNRKTQEKQEIRLEKLFDILA 565


>gi|282859273|ref|ZP_06268390.1| phosphoribulokinase/uridine kinase family protein [Prevotella bivia
           JCVIHMP010]
 gi|282587955|gb|EFB93143.1| phosphoribulokinase/uridine kinase family protein [Prevotella bivia
           JCVIHMP010]
          Length = 553

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 46/242 (19%), Positives = 100/242 (41%), Gaps = 3/242 (1%)

Query: 1   MPSDIKLTFPD-GSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGS 58
           M   I++   + G + N P+ +T +++ + +   L    V+  +N KV  L   V  +  
Sbjct: 1   MGQTIRIRCKNNGKVLNAPIGSTLAEIYKQLDLGLQYGPVSARVNNKVEGLHYRVYHDKD 60

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           IE +       +     S   ++ +AV  ++   +V I   + +G+Y +       +  +
Sbjct: 61  IEYLDLYTSSGIRTYTRSLFMVLCKAVHDLYSGSEVVIDIPVSNGYYCNLRLGHEVTKAD 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           + +I ++MQ+II    P  +   + E+A E+F    +  KV++L++  +   V  Y   +
Sbjct: 121 VDKIRERMQQIIDAHLPLQRFEATTEEAIEMFAKLGDEAKVKLLKNSSSLYTV-YYVLDD 179

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D   G  + +T Q+  F       G   R  S +           +   E+ +  +  
Sbjct: 180 YTDYYYGSMLTNTAQLTLFGLKQYYDGVLLRIPSVKDPSQLGELIKQDKMFEVFKEHHQW 239

Query: 239 EE 240
           + 
Sbjct: 240 QN 241


>gi|257878529|ref|ZP_05658182.1| prolyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257882947|ref|ZP_05662600.1| prolyl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|257894712|ref|ZP_05674365.1| prolyl-tRNA synthetase [Enterococcus faecium 1,231,408]
 gi|293567720|ref|ZP_06679062.1| prolyl-tRNA synthetase [Enterococcus faecium E1071]
 gi|294618726|ref|ZP_06698258.1| prolyl-tRNA synthetase [Enterococcus faecium E1679]
 gi|294620760|ref|ZP_06699967.1| prolyl-tRNA synthetase [Enterococcus faecium U0317]
 gi|257812757|gb|EEV41515.1| prolyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257818605|gb|EEV45933.1| prolyl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|257831091|gb|EEV57698.1| prolyl-tRNA synthetase [Enterococcus faecium 1,231,408]
 gi|291589563|gb|EFF21369.1| prolyl-tRNA synthetase [Enterococcus faecium E1071]
 gi|291595039|gb|EFF26384.1| prolyl-tRNA synthetase [Enterococcus faecium E1679]
 gi|291599740|gb|EFF30750.1| prolyl-tRNA synthetase [Enterococcus faecium U0317]
          Length = 569

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 46/221 (20%), Positives = 90/221 (40%), Gaps = 11/221 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++E   H+ L R   +  ++    G+  +     ++ + L   MR +
Sbjct: 4   SKMLIPTLREVPNDAEVLSHQILLRAGYIRQVSA---GIYSYLPLANRVLEKLKRIMREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +     E+  P +L   LW++SG +++Y  N++  K  +D     R   L P +     
Sbjct: 61  FEKIGAVEMLMPAILPAELWEESGRYETYGPNLYRFKDRND-----RKMILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +  + + SY++LP+ L +    YR+E      GL+R R F   DA+ F   E+  +E  
Sbjct: 116 DLMRNEINSYKKLPLNLYQIQPKYRDEKRPRF-GLLRGREFIMKDAYSFHATEESLDETY 174

Query: 406 KIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
           K +      ++K  G E   +           S      +E
Sbjct: 175 KDYEKAYTEVFKRCGLEFRSIIGDGGAMGGKDSKEFMAISE 215



 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/160 (13%), Positives = 48/160 (30%), Gaps = 9/160 (5%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I  +         A  ++ +  +   V++     G       I+ ++      
Sbjct: 404 RGIEIGHIFKIGTRYSESMGATVLDENG-REKFVIMGCYGIGVSRLLSAIVEQHSDEQGI 462

Query: 548 LWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            W    +P    +  +            E+   +      +  D RNE    K  +  + 
Sbjct: 463 NWPKGIAPFDLHIVQMNLKDEYQTSLTNELEEAMTKAGYEVLVDDRNERAGVKFADSDLI 522

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
             PI I  G K   +  + ++   +    +V   +    L
Sbjct: 523 GCPIRITVGKKAV-DGIVEVKIKKTGEMVEVRKEELANTL 561


>gi|325528042|gb|EGD05262.1| prolyl-tRNA synthetase [Burkholderia sp. TJI49]
          Length = 578

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 45/207 (21%), Positives = 83/207 (40%), Gaps = 11/207 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ + R   +  +A    G+  +   G +  + + + +R ++      E+  P 
Sbjct: 17  DAEIVSHKLMVRAGMIRRVA---GGIYNYLPVGLRSIRKVEAIVREEMNRAGALELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    LWQ+SG W+ Y   +   K   D       F + P +      +  + +KSYR++
Sbjct: 74  VQPAELWQESGRWEQYGPELLRFKDRKDN-----DFVIGPTHEEVVTDIARNQIKSYRQM 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKD 417
           PV   +  + +R+E      G+MR R F   DA+ F    E +     K++   + I+  
Sbjct: 129 PVNFYQIQTKFRDEIRPRF-GVMRGREFIMKDAYSFDKDAEGLNESYRKMYEAYVRIFTR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDA 444
            G E   V   +       S      A
Sbjct: 188 LGLEFRAVAADSGSIGGNFSHEFHVIA 214



 Score = 82.5 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 62/167 (37%), Gaps = 12/167 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNL 546
           R  + G + Q+         A +++   +   P+++     G   R +G  IE NF    
Sbjct: 409 RGIEVGHVFQLGTKYSEAMGATFLDESGKPQ-PMLMGCYGIGVT-RILGAAIEQNFDDKG 466

Query: 547 PLWL---SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
            +W    +P + ++  +    + +  E A ++   L +  + +  D R E       +  
Sbjct: 467 IIWPESIAPFEVVLCPMGYDRSDAVREAADKLYAELSAAGIDVILDDRGERPGVMFADWE 526

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           +  +P  ++ G++   E  I  +         +   DA+     E +
Sbjct: 527 LIGVPHRVVIGERGLKEGKIEYQGRRDAEATLLP-ADAVAATVAEKI 572


>gi|325067070|ref|ZP_08125743.1| prolyl-tRNA synthetase [Actinomyces oris K20]
          Length = 605

 Score =  136 bits (341), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 40/212 (18%), Positives = 79/212 (37%), Gaps = 11/212 (5%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
           +        ++E   HR L R   +        GV  W   G +  + +   +R+++   
Sbjct: 10  IRTLREDPADAEVASHRLLVRACYVR---RAAPGVYTWLPLGLRTLRKIEDIVRQEMDAM 66

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
             +E++ P +L    +Q +G WD Y   +F ++   D       + L P +         
Sbjct: 67  GGQEVHFPALLPAEPYQATGRWDDYGPTLFKLRDRKDG-----DYLLAPTHEEMFTLAVK 121

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
               SY++LP  + +  + YR+E      G++R R F   D++ F   +       + H 
Sbjct: 122 DLYSSYKDLPAVIYQIQTKYRDEARPR-AGIIRGREFVMKDSYSFDIDDAGLAAAYQAHR 180

Query: 410 -LIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
                I+   G + ++V           S+  
Sbjct: 181 DTYERIFTRLGLDYVIVNAMAGAMGGSHSEEF 212



 Score = 86.0 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/161 (18%), Positives = 59/161 (36%), Gaps = 8/161 (4%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE----NFKG 544
           R  + G I       S+     V   + K   V +     G   R +  + E    +   
Sbjct: 439 RGIEIGHIFELGRKYSQALGLTVLDENGKARVVTMGSYGIGVS-RVMAALAEANHDDKGL 497

Query: 545 NLPLWLSPIQAIVTTITSSAV--EYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIK 601
             P+ ++P    V          + A++IA+ L +  + +  D R + +   K  +  + 
Sbjct: 498 TWPVQIAPYHVQVLATGKDQAVFDVAEQIASSLDADGVEVLYDDRRKVSAGVKFADAELL 557

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +P  ++ G   A E ++ IR   +   + VS   A   L+
Sbjct: 558 GLPYTLVVGRDLAKEGTVEIRDRRTGERRSVSADAAAAELS 598


>gi|320531911|ref|ZP_08032821.1| prolyl-tRNA synthetase [Actinomyces sp. oral taxon 171 str. F0337]
 gi|320135880|gb|EFW27918.1| prolyl-tRNA synthetase [Actinomyces sp. oral taxon 171 str. F0337]
          Length = 610

 Score =  136 bits (341), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 40/212 (18%), Positives = 79/212 (37%), Gaps = 11/212 (5%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
           +        ++E   HR L R   +        GV  W   G +  + +   +R+++   
Sbjct: 10  IRTLREDPADAEVASHRLLVRACYVR---RAAPGVYTWLPLGLRTLRKIEDIVRQEMDAM 66

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
             +E++ P +L    +Q +G WD Y   +F ++   D       + L P +         
Sbjct: 67  GGQEVHFPALLPAEPYQATGRWDDYGPTLFKLRDRKDG-----DYLLAPTHEEMFTLAVK 121

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
               SY++LP  + +  + YR+E      G++R R F   D++ F   +       + H 
Sbjct: 122 DLYSSYKDLPAIVYQIQTKYRDEARPR-AGIIRGREFVMKDSYSFDIDDAGLAAAYQAHR 180

Query: 410 -LIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
                I+   G + ++V           S+  
Sbjct: 181 DTYERIFTRLGLDYVIVNAMAGAMGGSHSEEF 212



 Score = 81.0 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 57/161 (35%), Gaps = 8/161 (4%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE----NFKG 544
           R  + G I       S+     V   + K   V +     G   R +  + E    +   
Sbjct: 439 RGIEIGHIFELGRKYSQALGLSVLDENGKARVVTMGSYGIGVS-RVMAALAEANHDDKGL 497

Query: 545 NLPLWLSPIQAIVTTITSSAV--EYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIK 601
             P+ ++P    V          + A +IA+ L +  + +  D R + +   K  +  + 
Sbjct: 498 TWPVQIAPYHVQVLATGKDQAVFDVAGQIASSLDADGVEVLYDDRRKVSAGVKFADAELL 557

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +P  ++ G   A E ++ IR   +   + V    A   L+
Sbjct: 558 GLPYTVVVGRDLAREGTVEIRDRRTGEHRSVPADAAATELS 598


>gi|312195504|ref|YP_004015565.1| prolyl-tRNA synthetase [Frankia sp. EuI1c]
 gi|311226840|gb|ADP79695.1| prolyl-tRNA synthetase [Frankia sp. EuI1c]
          Length = 580

 Score =  136 bits (341), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 45/217 (20%), Positives = 88/217 (40%), Gaps = 11/217 (5%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
           +        ++E  +HR L R   +    +  SG+  +   G ++ + + + +R+++   
Sbjct: 18  IRTLREDPADAETANHRLLVRGGYVR---KAASGIYSYLPLGLRVLRRIEAVVRQEMAAA 74

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
             +E+  P ++ + LW +SG W  Y   MF V     T      F L P +     ++  
Sbjct: 75  GCQELLMPALMPRELWDRSGRWADYGDLMFRVVDRKGT-----EFCLGPTHEELITSLVA 129

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IH 408
           + L  +R+LP+R+ +  + YR+E      GL+R R F   DA+ F   E    E  + ++
Sbjct: 130 NELGGHRDLPLRVFQIQTKYRDELRPR-SGLVRSRDFVMKDAYTFHADEDSLRETYREMY 188

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
                ++   G     V+          +       E
Sbjct: 189 AAYERVFTRCGLRFRAVEAQAGEMGGGRNQEFMAPTE 225



 Score = 74.0 bits (180), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 63/160 (39%), Gaps = 10/160 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG--- 544
           R  + G I Q+         A ++++      P ++     G I R + ++IE       
Sbjct: 417 RAVEIGHIFQLGTRYSVPLGATFLDAAGV-ERPALMGCYGIG-ISRLMSVVIEQHHDEHG 474

Query: 545 -NLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIK 601
              P  L+P    V  +      +  + +A++L    L +  D R+  +   K  +  + 
Sbjct: 475 IRWPAELAPYDVQVIPLGRRVDEDLVRSVADMLAGVGLEVLVDDRSGASAGVKFADADLI 534

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
             P  ++ G + A+E    +R    +T  +V+L +   ++
Sbjct: 535 GAPFQVVLGRR-AAEGIAELRTRDRSTVTEVALTELTNVI 573


>gi|229152018|ref|ZP_04280213.1| Prolyl-tRNA synthetase [Bacillus cereus m1550]
 gi|228631367|gb|EEK88001.1| Prolyl-tRNA synthetase [Bacillus cereus m1550]
          Length = 566

 Score =  136 bits (341), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 89/203 (43%), Gaps = 11/203 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R +++     E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K      ++ R FAL   +      +    +KSY++L
Sbjct: 74  MQAAELWQESGRWYSYGSELMRMKD-----RNAREFALGATHEEVITDLVRDEVKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKD 417
           P+ L +  + +R+E      GL+R R F   DA+ F  T+E +     +++    +I+  
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEVYDRLYKAYSNIFAR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDAL 440
            G     V   +       +   
Sbjct: 188 CGLNFRAVIADSGAMGGKDTHEF 210



 Score = 79.1 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 62/157 (39%), Gaps = 11/157 (7%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G +  +        NA +++ +  K  P+++     G   R +  + E F     
Sbjct: 404 RGIEVGHVFKLGTRYSEAMNATFLDENG-KTQPLIMGCYGIGVS-RTVAAIAEQFNDENG 461

Query: 546 --LPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              P  ++P    V  +   + +  E  + I N L+     +  D R E    K  +  +
Sbjct: 462 LVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERAGVKFADADL 521

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
             +P+ +  G K A E  + ++   +  +++V++ + 
Sbjct: 522 FGLPVRVTVGKK-ADEGIVEVKVRATGESEEVNVEEL 557


>gi|257884339|ref|ZP_05663992.1| prolyl-tRNA synthetase [Enterococcus faecium 1,231,501]
 gi|261207398|ref|ZP_05922084.1| prolyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289566680|ref|ZP_06447097.1| prolyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|294613940|ref|ZP_06693875.1| prolyl-tRNA synthetase [Enterococcus faecium E1636]
 gi|257820177|gb|EEV47325.1| prolyl-tRNA synthetase [Enterococcus faecium 1,231,501]
 gi|260078289|gb|EEW65994.1| prolyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289161539|gb|EFD09422.1| prolyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|291593215|gb|EFF24789.1| prolyl-tRNA synthetase [Enterococcus faecium E1636]
          Length = 569

 Score =  136 bits (341), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 46/221 (20%), Positives = 90/221 (40%), Gaps = 11/221 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++E   H+ L R   +  ++    G+  +     ++ + L   MR +
Sbjct: 4   SKMLIPTLREVPNDAEVLSHQILLRAGYIRQVSA---GIYSYLPLANRVLEKLKRIMREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +     E+  P +L   LW++SG +++Y  N++  K  +D     R   L P +     
Sbjct: 61  FEKIGAVEMLMPAILPAELWEESGRYETYGPNLYRFKDRND-----RKMILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +  + + SY++LP+ L +    YR+E      GL+R R F   DA+ F   E+  +E  
Sbjct: 116 DLMRNEINSYKKLPLNLYQIQPKYRDEKRPRF-GLLRGREFIMKDAYSFHATEESLDETY 174

Query: 406 KIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
           K +      ++K  G E   +           S      +E
Sbjct: 175 KDYEKAYTEVFKRCGLEFRSIIGDGGAMGGKDSKEFMAISE 215



 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/160 (13%), Positives = 48/160 (30%), Gaps = 9/160 (5%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I  +         A  ++ +  +   V++     G       I+ ++      
Sbjct: 404 RGIEIGHIFKIGTRYSESMGATVLDENG-REKFVIMGCYGIGVSRLLSAIVEQHSDEQGI 462

Query: 548 LWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            W    +P    +  +            E+   +      +  D RNE    K  +  + 
Sbjct: 463 NWPKGIAPFDLHIVQMNLKDEYQTNLTNELEEAMTKAGYEVLVDDRNERAGVKFADSDLI 522

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
             PI I  G K   +  + ++   +    +V   +    L
Sbjct: 523 GCPIRITVGKKAV-DGIVEVKIKKTGEMVEVRKEELANTL 561


>gi|69246859|ref|ZP_00604151.1| Prolyl-tRNA synthetase, bacterial [Enterococcus faecium DO]
 gi|257889274|ref|ZP_05668927.1| prolyl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|258615945|ref|ZP_05713715.1| prolyl-tRNA synthetase [Enterococcus faecium DO]
 gi|260560114|ref|ZP_05832292.1| prolyl-tRNA synthetase [Enterococcus faecium C68]
 gi|293560203|ref|ZP_06676705.1| prolyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|314937502|ref|ZP_07844835.1| prolyl-tRNA synthetase [Enterococcus faecium TX0133a04]
 gi|314942161|ref|ZP_07849015.1| prolyl-tRNA synthetase [Enterococcus faecium TX0133C]
 gi|314947499|ref|ZP_07850914.1| prolyl-tRNA synthetase [Enterococcus faecium TX0082]
 gi|314951486|ref|ZP_07854535.1| prolyl-tRNA synthetase [Enterococcus faecium TX0133A]
 gi|314992576|ref|ZP_07857994.1| prolyl-tRNA synthetase [Enterococcus faecium TX0133B]
 gi|314995489|ref|ZP_07860589.1| prolyl-tRNA synthetase [Enterococcus faecium TX0133a01]
 gi|68195040|gb|EAN09503.1| Prolyl-tRNA synthetase, bacterial [Enterococcus faecium DO]
 gi|257825634|gb|EEV52260.1| prolyl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|260073949|gb|EEW62273.1| prolyl-tRNA synthetase [Enterococcus faecium C68]
 gi|291605875|gb|EFF35307.1| prolyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|313590323|gb|EFR69168.1| prolyl-tRNA synthetase [Enterococcus faecium TX0133a01]
 gi|313592868|gb|EFR71713.1| prolyl-tRNA synthetase [Enterococcus faecium TX0133B]
 gi|313596326|gb|EFR75171.1| prolyl-tRNA synthetase [Enterococcus faecium TX0133A]
 gi|313599084|gb|EFR77929.1| prolyl-tRNA synthetase [Enterococcus faecium TX0133C]
 gi|313643143|gb|EFS07723.1| prolyl-tRNA synthetase [Enterococcus faecium TX0133a04]
 gi|313646049|gb|EFS10629.1| prolyl-tRNA synthetase [Enterococcus faecium TX0082]
          Length = 569

 Score =  136 bits (341), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 46/221 (20%), Positives = 90/221 (40%), Gaps = 11/221 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++E   H+ L R   +  ++    G+  +     ++ + L   MR +
Sbjct: 4   SKMLIPTLREVPNDAEVLSHQILLRAGYIRQVSA---GIYSYLPLANRVLEKLKRIMREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +     E+  P +L   LW++SG +++Y  N++  K  +D     R   L P +     
Sbjct: 61  FEKIGAVEMLMPAILPAELWEESGRYETYGPNLYRFKDRND-----RKMILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +  + + SY++LP+ L +    YR+E      GL+R R F   DA+ F   E+  +E  
Sbjct: 116 DLMRNEINSYKKLPLNLYQIQPKYRDEKRPRF-GLLRGREFIMKDAYSFHATEESLDETY 174

Query: 406 KIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
           K +      ++K  G E   +           S      +E
Sbjct: 175 KDYEKAYTEVFKRCGLEFRSIIGDGGAMGGKDSKEFMAISE 215



 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/160 (13%), Positives = 49/160 (30%), Gaps = 9/160 (5%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I  +         A  ++ +  +   V++     G       I+ ++      
Sbjct: 404 RGIEIGHIFKIGTRYSESMGATVLDENG-REKFVIMGCYGIGVSRLLSAIVEQHSDEQGI 462

Query: 548 LWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            W    +P    +  +            E+   +      +  D RNE    K  +  + 
Sbjct: 463 NWPKGIAPFDLHIVQMNLKDEYQTNLTNELEEAMTKAGYEVLVDDRNERAGVKFADSDLI 522

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
             PI I  G K   +  + ++   +    +V   + +  L
Sbjct: 523 GCPIRITVGKKAV-DGIVEVKIKKTGEMVEVRKEELVNTL 561


>gi|260886406|ref|ZP_05897669.1| phosphoribulokinase family protein [Selenomonas sputigena ATCC
           35185]
 gi|330838828|ref|YP_004413408.1| phosphoribulokinase/uridine kinase [Selenomonas sputigena ATCC
           35185]
 gi|260863853|gb|EEX78353.1| phosphoribulokinase family protein [Selenomonas sputigena ATCC
           35185]
 gi|329746592|gb|AEB99948.1| phosphoribulokinase/uridine kinase [Selenomonas sputigena ATCC
           35185]
          Length = 548

 Score =  136 bits (341), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 50/236 (21%), Positives = 96/236 (40%), Gaps = 2/236 (0%)

Query: 12  GSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPEDPRSL 70
           G  +  P   T  ++A+ + +      VA  ++  + DL   V +  +IE++        
Sbjct: 6   GKGREIPAEMTLLELAQEVQKKGEPLIVAARVDNVLRDLQTSVGDFHTIELVDTRSEFGR 65

Query: 71  AVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEII 130
            + R S   ++  AV+ ++PE +V +      G Y         +   +  +E++M+EI+
Sbjct: 66  RIYRRSVVFLLIMAVRELYPEAEVVVQFTAHKGLYCAIQSPFDVTESVVRALEQRMREIV 125

Query: 131 ARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRS 190
           A + P +K+ L  E+  +LF+  ++  K  ++ S+   E  +LY  GE++D   GP V +
Sbjct: 126 AENRPIVKKRLQREEVVQLFKKSEQIEKANLVMSL-ETEKASLYYCGEFYDYLFGPMVSA 184

Query: 191 TGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDH 246
           TG + KF       G   R              A      +             D+
Sbjct: 185 TGVLDKFALDAMPGGVLLRTPEPSAPEIVPAFKAQPKFGSILMEAERWASVLHCDY 240


>gi|206972654|ref|ZP_03233595.1| prolyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|206732411|gb|EDZ49592.1| prolyl-tRNA synthetase [Bacillus cereus AH1134]
          Length = 566

 Score =  136 bits (341), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 89/203 (43%), Gaps = 11/203 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R +++     E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K      ++ R FAL   +      +    +KSY++L
Sbjct: 74  MQAAELWQESGRWYSYGSELMRMKD-----RNAREFALGATHEEVITDLVRDEVKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKD 417
           P+ L +  + +R+E      GL+R R F   DA+ F  T+E +     +++    +I+  
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEVYDRLYKAYSNIFAR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDAL 440
            G     V   +       +   
Sbjct: 188 CGLNFRAVIADSGAMGGKDTHEF 210



 Score = 79.4 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 61/157 (38%), Gaps = 11/157 (7%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G +  +        NA +++ +  K  P+++     G   R +  + E F     
Sbjct: 404 RGIEVGHVFKLGTRYSEAMNATFLDENG-KTQPLIMGCYGIGVS-RTVAAIAEQFNDENG 461

Query: 546 --LPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              P  ++P    V  +   + +  E  + I N L+     +  D R E    K  +  +
Sbjct: 462 LVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERAGVKFADADL 521

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
             +P+ +  G K A E  + ++   +  +++V + + 
Sbjct: 522 FGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEEL 557


>gi|228954095|ref|ZP_04116124.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|229071317|ref|ZP_04204540.1| Prolyl-tRNA synthetase [Bacillus cereus F65185]
 gi|228711771|gb|EEL63723.1| Prolyl-tRNA synthetase [Bacillus cereus F65185]
 gi|228805661|gb|EEM52251.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
          Length = 566

 Score =  136 bits (341), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 89/203 (43%), Gaps = 11/203 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R +++     E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K      ++ R FAL   +      +    +KSY++L
Sbjct: 74  MQAAELWQESGRWYSYGSELMRMKD-----RNAREFALGATHEEVITDLVRDEVKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKD 417
           P+ L +  + +R+E      GL+R R F   DA+ F  T+E +     +++    +I+  
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEVYDRLYKAYSNIFTR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDAL 440
            G     V   +       +   
Sbjct: 188 CGLNFRAVIADSGAMGGKDTHEF 210



 Score = 79.4 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 61/157 (38%), Gaps = 11/157 (7%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G +  +        NA +++ +  K  P+++     G   R +  + E F     
Sbjct: 404 RGIEVGHVFKLGTRYSEAMNATFLDENG-KTQPLIMGCYGIGVS-RTVAAIAEQFNDENG 461

Query: 546 --LPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              P  ++P    V  +   + +  E  + I N L+     +  D R E    K  +  +
Sbjct: 462 LVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERAGVKFADADL 521

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
             +P+ +  G K A E  + ++   +  +++V + + 
Sbjct: 522 FGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEEL 557


>gi|257084658|ref|ZP_05579019.1| prolyl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|256992688|gb|EEU79990.1| prolyl-tRNA synthetase [Enterococcus faecalis Fly1]
          Length = 572

 Score =  136 bits (341), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 48/254 (18%), Positives = 100/254 (39%), Gaps = 16/254 (6%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++E   H+ L R   +  +A    G+  +     ++ + L + MR +
Sbjct: 4   SKMLIPTLREVPNDAEVLSHQILLRAGYIRQVAA---GIYSYLPLANRVLEKLKTIMREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +  D  E+  P +L   LW++SG +++Y  N++ +K  +D     R + L P +     
Sbjct: 61  FEKIDAVEMLMPALLPAELWKESGRYETYGPNLYRLKDRND-----RDYILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    + SY+ LP+ L +  + YR+E      GL+R R F   D + F   E   ++  
Sbjct: 116 ELIRDEINSYKRLPLNLYQIQTKYRDEKRPR-SGLLRGREFIMKDGYSFHADEASLDQSY 174

Query: 406 KIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
           + +      I++  G E   +           S      +E     +  + ++     + 
Sbjct: 175 RDYEKAYSRIFERCGLEFRAIIGDGGAMGGKDSKEFMAISEIGEDTICYSTESDYAANLE 234

Query: 465 TGVLLGEGAFYGPK 478
                   + Y PK
Sbjct: 235 MAT-----SLYTPK 243



 Score = 64.4 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 23/140 (16%), Positives = 49/140 (35%), Gaps = 9/140 (6%)

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG----NLPLWLSPIQAIVTTITSS-- 563
            V   + +   V++     G   R +  ++E        N P  ++P    V  +     
Sbjct: 425 TVLDENGREKSVIMGCYGIGVS-RLLSAIVEQNADERGINWPTGIAPFDLHVVQMNVKDE 483

Query: 564 -AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
              + +QE+  ++      +  D RNE    K  +  +   PI I  G K   +  + ++
Sbjct: 484 YQTKLSQEVEAMMTEAGYEVLVDDRNERAGVKFADADLIGCPIRITVGKKAV-DGVVEVK 542

Query: 623 RFGSTTTQKVSLLDAIPILT 642
              +    +V   +    L+
Sbjct: 543 IKRTGEMLEVRKEELESTLS 562


>gi|229815406|ref|ZP_04445738.1| hypothetical protein COLINT_02454 [Collinsella intestinalis DSM
           13280]
 gi|229808939|gb|EEP44709.1| hypothetical protein COLINT_02454 [Collinsella intestinalis DSM
           13280]
          Length = 569

 Score =  136 bits (341), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 45/235 (19%), Positives = 91/235 (38%), Gaps = 12/235 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +            E+E   HR + R   +    +  +G+  +    W+  + +   +R +
Sbjct: 4   SNLYAPTLKEDPAEAELASHRLMLRAGMIR---KQAAGLYSYLPLAWRSLRKIEDIVRDE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E+  P ++D  +W++SG ++ Y   +  +     + +  R F L P +     
Sbjct: 61  MDAAGAQELLMPIMVDAQVWRESGRYNVYGPELMRI-----SDRHEREFVLGPTHEETVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNEC 404
            +  + LKSY++LPV L +    +R+E      GLMR R F   D + F  T+E +    
Sbjct: 116 DLIKNELKSYKQLPVNLYQIQDKFRDEMRPRF-GLMRGREFIMKDGYSFNATQESLQETY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSS 459
             +     +I +  G + + V   +       S      A +  +  L       
Sbjct: 175 DDMKQAYANICERCGLKALPVVADSGQIGGDTSVEFMALA-DAGEAALVYCDACG 228



 Score = 92.2 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 17/153 (11%), Positives = 50/153 (32%), Gaps = 7/153 (4%)

Query: 497 QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL---SPI 553
           Q+         A + + + E+  P ++     G        + ++   N  +W    +P 
Sbjct: 411 QLGTKYSEAMGATFADENGEEK-PFLMGCYGVGVSRTLAASVEQHHDENGIIWPVSIAPY 469

Query: 554 QAIVTT---ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           +  +           E    +   L    + +  D R+     K  ++ +   P  I+ G
Sbjct: 470 EVSIMPLDPTIPECAEVCDRLTAELCEAGIEVIVDDRDIRPGVKFADNDLMGFPYQIVLG 529

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +     ++ ++   +   + V++ +    +  
Sbjct: 530 KRGLKNGTVELKDRATGEREDVAIDEVASKVAD 562


>gi|229549443|ref|ZP_04438168.1| prolyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
 gi|255972147|ref|ZP_05422733.1| prolyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|257421971|ref|ZP_05598961.1| prolyl-tRNA synthetase [Enterococcus faecalis X98]
 gi|312953422|ref|ZP_07772262.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|229305680|gb|EEN71676.1| prolyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
 gi|255963165|gb|EET95641.1| prolyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|257163795|gb|EEU93755.1| prolyl-tRNA synthetase [Enterococcus faecalis X98]
 gi|310628631|gb|EFQ11914.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|315152090|gb|EFT96106.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0031]
 gi|315155317|gb|EFT99333.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0043]
 gi|315159106|gb|EFU03123.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0312]
 gi|327535671|gb|AEA94505.1| proline--tRNA ligase [Enterococcus faecalis OG1RF]
          Length = 572

 Score =  136 bits (341), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 48/254 (18%), Positives = 100/254 (39%), Gaps = 16/254 (6%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++E   H+ L R   +  +A    G+  +     ++ + L + MR +
Sbjct: 4   SKMLIPTLREVPNDAEVLSHQILLRAGYIRQVAA---GIYSYLPLANRVLEKLKTIMREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +  D  E+  P +L   LW++SG +++Y  N++ +K  +D     R + L P +     
Sbjct: 61  FEKIDAVEMLMPALLPAELWKESGRYETYGPNLYRLKDRND-----RDYILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    + SY+ LP+ L +  + YR+E      GL+R R F   D + F   E   ++  
Sbjct: 116 ELIRDEINSYKRLPLNLYQIQTKYRDEKRPR-SGLLRGREFIMKDGYSFHADEASLDQSY 174

Query: 406 KIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
           + +      I++  G E   +           S      +E     +  + ++     + 
Sbjct: 175 RDYEKAYSRIFERCGLEFRAIIGDGGAMGGKDSKEFMAISEIGEDTICYSTESDYAANLE 234

Query: 465 TGVLLGEGAFYGPK 478
                   + Y PK
Sbjct: 235 MAT-----SLYTPK 243



 Score = 64.4 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 23/140 (16%), Positives = 49/140 (35%), Gaps = 9/140 (6%)

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG----NLPLWLSPIQAIVTTITSS-- 563
            V   + +   V++     G   R +  ++E        N P  ++P    V  +     
Sbjct: 425 TVLDENGREKSVIMGCYGIGVS-RLLSAIVEQNADERGINWPTGIAPFDLHVVQMNVKDE 483

Query: 564 -AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
              + +QE+  ++      +  D RNE    K  +  +   PI I  G K   +  + ++
Sbjct: 484 YQTKLSQEVEAMMTEAGYEVLVDDRNERAGVKFADADLIGCPIRITVGKKAV-DGVVEVK 542

Query: 623 RFGSTTTQKVSLLDAIPILT 642
              +    +V   +    L+
Sbjct: 543 IKRTGEMLEVRKEELESTLS 562


>gi|218235963|ref|YP_002368620.1| prolyl-tRNA synthetase [Bacillus cereus B4264]
 gi|226731428|sp|B7HDU2|SYP_BACC4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|218163920|gb|ACK63912.1| proline--tRNA ligase [Bacillus cereus B4264]
          Length = 566

 Score =  136 bits (341), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 89/203 (43%), Gaps = 11/203 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R +++     E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K      ++ R FAL   +      +    +KSY++L
Sbjct: 74  MQAAELWQESGRWYSYGSELMRMKD-----RNAREFALGATHEEVITDLVRDEVKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKD 417
           P+ L +  + +R+E      GL+R R F   DA+ F  T+E +     +++    +I+  
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEVYDRLYKAYSNIFAR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDAL 440
            G     V   +       +   
Sbjct: 188 CGLNFRAVIADSGAMGGKDTHEF 210



 Score = 79.1 bits (193), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 62/157 (39%), Gaps = 11/157 (7%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G +  +        NA +++ +  K  P+++     G   R +  + E F     
Sbjct: 404 RGIEVGHVFKLGTRYSEAMNATFLDENG-KTQPLIMGCYGIGVS-RTVAAIAEQFNDENG 461

Query: 546 --LPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              P  ++P    V  +   + +  E  + I N L+     +  D R E    K  +  +
Sbjct: 462 LVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERAGVKFADADL 521

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
             +P+ +  G K A E  + ++   +  +++V++ + 
Sbjct: 522 FGLPVRVTVGKK-ADEGIVEVKVRATGESEEVNVEEL 557


>gi|257898235|ref|ZP_05677888.1| prolyl-tRNA synthetase [Enterococcus faecium Com15]
 gi|293570616|ref|ZP_06681667.1| prolyl-tRNA synthetase [Enterococcus faecium E980]
 gi|257836147|gb|EEV61221.1| prolyl-tRNA synthetase [Enterococcus faecium Com15]
 gi|291609287|gb|EFF38558.1| prolyl-tRNA synthetase [Enterococcus faecium E980]
          Length = 569

 Score =  136 bits (341), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 46/221 (20%), Positives = 90/221 (40%), Gaps = 11/221 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++E   H+ L R   +  ++    G+  +     ++ + L   MR +
Sbjct: 4   SKMLIPTLREVPNDAEVLSHQILLRAGYIRQVSA---GIYSYLPLANRVLEKLKRIMREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +     E+  P +L   LW++SG +++Y  N++  K  +D     R   L P +     
Sbjct: 61  FEKIGAVEMLMPAILPAELWEESGRYETYGPNLYRFKDRND-----RKMILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +  + + SY++LP+ L +    YR+E      GL+R R F   DA+ F   E+  +E  
Sbjct: 116 DLMRNEINSYKKLPLNLYQIQPKYRDEKRPRF-GLLRGREFIMKDAYSFHATEESLDETY 174

Query: 406 KIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
           K +      ++K  G E   +           S      +E
Sbjct: 175 KDYEKAYTEVFKRCGLEFRSIIGDGGAMGGKDSKEFMAISE 215



 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/160 (13%), Positives = 48/160 (30%), Gaps = 9/160 (5%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I  +         A  ++ +  +   V++     G       I+ ++      
Sbjct: 404 RGIEIGHIFKIGTRYSESMGATVLDENG-REKFVIMGCYGIGVSRLLSAIVEQHSDEQGI 462

Query: 548 LWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            W    +P    +  +            E+   +      +  D RNE    K  +  + 
Sbjct: 463 NWPKGIAPFDLHIVQMNLKDEYQTNLTNELEEAMTKAGYEVLVDDRNERAGVKFADSDLI 522

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
             PI I  G K   +  + ++   +    +V   +    L
Sbjct: 523 GCPIRITVGKKAV-DGIVEVKIKKTGEMVEVRKEELANTL 561


>gi|227553916|ref|ZP_03983963.1| prolyl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|255975215|ref|ZP_05425801.1| prolyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|256617163|ref|ZP_05474009.1| prolyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|256763073|ref|ZP_05503653.1| prolyl-tRNA synthetase [Enterococcus faecalis T3]
 gi|256961317|ref|ZP_05565488.1| prolyl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|256963555|ref|ZP_05567726.1| prolyl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|257082033|ref|ZP_05576394.1| prolyl-tRNA synthetase [Enterococcus faecalis E1Sol]
 gi|257416590|ref|ZP_05593584.1| prolyl-tRNA synthetase [Enterococcus faecalis AR01/DG]
 gi|257419837|ref|ZP_05596831.1| prolyl-tRNA synthetase [Enterococcus faecalis T11]
 gi|293383602|ref|ZP_06629512.1| proline--tRNA ligase [Enterococcus faecalis R712]
 gi|293387285|ref|ZP_06631842.1| proline--tRNA ligase [Enterococcus faecalis S613]
 gi|307271494|ref|ZP_07552766.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0855]
 gi|307277205|ref|ZP_07558309.1| prolyl-tRNA synthetase [Enterococcus faecalis TX2134]
 gi|307285834|ref|ZP_07565968.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0860]
 gi|312899806|ref|ZP_07759125.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0470]
 gi|312906152|ref|ZP_07765164.1| prolyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
 gi|312909497|ref|ZP_07768352.1| prolyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
 gi|227176902|gb|EEI57874.1| prolyl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|255968087|gb|EET98709.1| prolyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|256596690|gb|EEU15866.1| prolyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|256684324|gb|EEU24019.1| prolyl-tRNA synthetase [Enterococcus faecalis T3]
 gi|256951813|gb|EEU68445.1| prolyl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|256954051|gb|EEU70683.1| prolyl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|256990063|gb|EEU77365.1| prolyl-tRNA synthetase [Enterococcus faecalis E1Sol]
 gi|257158418|gb|EEU88378.1| prolyl-tRNA synthetase [Enterococcus faecalis ARO1/DG]
 gi|257161665|gb|EEU91625.1| prolyl-tRNA synthetase [Enterococcus faecalis T11]
 gi|291079114|gb|EFE16478.1| proline--tRNA ligase [Enterococcus faecalis R712]
 gi|291083322|gb|EFE20285.1| proline--tRNA ligase [Enterococcus faecalis S613]
 gi|295113413|emb|CBL32050.1| prolyl-tRNA synthetase, family II [Enterococcus sp. 7L76]
 gi|306502595|gb|EFM71862.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0860]
 gi|306506135|gb|EFM75301.1| prolyl-tRNA synthetase [Enterococcus faecalis TX2134]
 gi|306511766|gb|EFM80764.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0855]
 gi|310627798|gb|EFQ11081.1| prolyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
 gi|311290170|gb|EFQ68726.1| prolyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
 gi|311293056|gb|EFQ71612.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0470]
 gi|315146006|gb|EFT90022.1| prolyl-tRNA synthetase [Enterococcus faecalis TX2141]
 gi|315146660|gb|EFT90676.1| prolyl-tRNA synthetase [Enterococcus faecalis TX4244]
 gi|315161730|gb|EFU05747.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0645]
 gi|315166430|gb|EFU10447.1| prolyl-tRNA synthetase [Enterococcus faecalis TX1341]
 gi|315170318|gb|EFU14335.1| prolyl-tRNA synthetase [Enterococcus faecalis TX1342]
 gi|315173646|gb|EFU17663.1| prolyl-tRNA synthetase [Enterococcus faecalis TX1346]
 gi|315574384|gb|EFU86575.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0309B]
 gi|315580142|gb|EFU92333.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0309A]
          Length = 572

 Score =  136 bits (341), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 48/254 (18%), Positives = 100/254 (39%), Gaps = 16/254 (6%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++E   H+ L R   +  +A    G+  +     ++ + L + MR +
Sbjct: 4   SKMLIPTLREVPNDAEVLSHQILLRAGYIRQVAA---GIYSYLPLANRVLEKLKTIMREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +  D  E+  P +L   LW++SG +++Y  N++ +K  +D     R + L P +     
Sbjct: 61  FEKIDAVEMLMPALLPAELWKESGRYETYGPNLYRLKDRND-----RDYILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    + SY+ LP+ L +  + YR+E      GL+R R F   D + F   E   ++  
Sbjct: 116 ELIRDEINSYKRLPLNLYQIQTKYRDEKRPR-SGLLRGREFIMKDGYSFHADEASLDQSY 174

Query: 406 KIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
           + +      I++  G E   +           S      +E     +  + ++     + 
Sbjct: 175 RDYEKAYSRIFERCGLEFRAIIGDGGAMGGKDSKEFMAISEIGEDTICYSTESDYAANLE 234

Query: 465 TGVLLGEGAFYGPK 478
                   + Y PK
Sbjct: 235 MAT-----SLYTPK 243



 Score = 64.4 bits (155), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 23/140 (16%), Positives = 49/140 (35%), Gaps = 9/140 (6%)

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG----NLPLWLSPIQAIVTTITSS-- 563
            V   + +   V++     G   R +  ++E        N P  ++P    V  +     
Sbjct: 425 TVLDENGREKSVIMGCYGIGVS-RLLSAIVEQNADERGINWPTGIAPFDLHVVQMNVKDE 483

Query: 564 -AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
              + +QE+  ++      +  D RNE    K  +  +   PI I  G K   +  + ++
Sbjct: 484 YQTKLSQEVEAMMTEAGYEVLVDDRNERAGVKFADADLIGCPIRITVGKKAV-DGVVEVK 542

Query: 623 RFGSTTTQKVSLLDAIPILT 642
              +    +V   +    L+
Sbjct: 543 IKRTGEMLEVRKEELESTLS 562


>gi|206561773|ref|YP_002232538.1| prolyl-tRNA synthetase [Burkholderia cenocepacia J2315]
 gi|226699125|sp|B4E5W6|SYP_BURCJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|198037815|emb|CAR53759.1| prolyl-tRNA synthetase [Burkholderia cenocepacia J2315]
          Length = 578

 Score =  136 bits (341), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 46/207 (22%), Positives = 84/207 (40%), Gaps = 11/207 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ + R   +  +A    G+  +   G +  + + + +R ++      E+  P 
Sbjct: 17  DAEIVSHKLMVRAGMIRRVA---GGIYNYLPVGLRSIRKVEAIVREEMNRAGAIELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    LWQ+SG W+ Y   +   K   D       F + P +      +  + +KSYR++
Sbjct: 74  VQPAELWQESGRWEQYGPELLRFKDRKDN-----DFVIGPTHEEVVTDIARNQIKSYRQM 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKD 417
           PV   +  + +R+E      G+MR R F   DA+ F       NE   K+++  + I+  
Sbjct: 129 PVNFYQIQTKFRDEIRPRF-GVMRGREFIMKDAYSFDKDAAGLNESYRKMYDAYVRIFSR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDA 444
            G E   V   +       S      A
Sbjct: 188 LGLEFRAVAADSGSIGGNFSHEFHVIA 214



 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 26/164 (15%), Positives = 60/164 (36%), Gaps = 11/164 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNL 546
           R  + G + Q+         A +++   +   P+++     G I R +G  IE NF    
Sbjct: 409 RGIEVGHVFQLGTKYSEAMGATFLDESGKPQ-PMLMGCYGVG-ITRILGAAIEQNFDDRG 466

Query: 547 PLWL---SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
            +W    +P + ++  +    +    E A ++   L +  + +  D R E       +  
Sbjct: 467 IIWPESIAPFEVVLCPMGYDRSDLVRETADKLYAELVAAGIDVILDDRGERPGVMFADWE 526

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  +P  ++ G++   E  I  +         +    A   + +
Sbjct: 527 LIGVPHRLVIGERGLKEGKIEYQGRRDAEATLLPADTAAATVAE 570


>gi|289550945|ref|YP_003471849.1| Bacterial type prolyl-tRNA synthetase [Staphylococcus lugdunensis
           HKU09-01]
 gi|315658447|ref|ZP_07911319.1| proline--tRNA ligase [Staphylococcus lugdunensis M23590]
 gi|289180477|gb|ADC87722.1| Bacterial type prolyl-tRNA synthetase [Staphylococcus lugdunensis
           HKU09-01]
 gi|315496776|gb|EFU85099.1| proline--tRNA ligase [Staphylococcus lugdunensis M23590]
          Length = 566

 Score =  136 bits (341), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 47/216 (21%), Positives = 88/216 (40%), Gaps = 11/216 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        E+E   H+ L +      I +  SG+  +     ++   +   +R +
Sbjct: 4   SKVFIPTMREVPAEAEALSHQLLLKAG---LIKQSTSGIYSYLPLATRVLNNISKIIREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++  D  EI  P +    LW++SG W +Y   +  +K      ++ R FAL P +     
Sbjct: 61  MERIDAVEILMPVLQQAELWEESGRWSAYGPELMRLKD-----RNGREFALGPTHEEVVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           ++    LKSY+ LP+ L +  S +R+E      GL+R R F   DA+ F   E   +   
Sbjct: 116 SLVRDELKSYKRLPLTLFQIQSKFRDEKRPRF-GLLRGREFIMKDAYSFHADEASLDATY 174

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           + ++     I+K  G     V   +       +   
Sbjct: 175 QDMYQAYGRIFKRVGINVRPVLADSGAIGGNHTHEF 210



 Score = 66.7 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/178 (17%), Positives = 62/178 (34%), Gaps = 18/178 (10%)

Query: 482 ILKDAIGRDWQCGTIQ------VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           +L D  G+      I+      +        NA ++++   K  P+++     G      
Sbjct: 391 MLSDGSGKAQFAEGIEVGQVFKLGTKYSEAMNATFLDNQG-KAQPLIMGCYGIGVSRTLS 449

Query: 536 GIMIENFKGNLPLWLSPIQA------IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE 589
            I+ +N   N  +W   +         V          A  +   L      +  D R E
Sbjct: 450 AIVEQNNDDNGIIWPKTVTPFDLHLITVNPKKEEQQSLADNLYEQLNGM-FDVLYDDRKE 508

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA---IPILTKE 644
               K  +  +  +PI I+ G K+A+E  + ++   + T++ V +      I  +  E
Sbjct: 509 RAGVKFNDADLIGLPIRIVVG-KQAAEGIVEVKVRRTGTSEDVHVEQLEQYIKAIYNE 565


>gi|326387775|ref|ZP_08209381.1| prolyl-tRNA synthetase [Novosphingobium nitrogenifigens DSM 19370]
 gi|326207821|gb|EGD58632.1| prolyl-tRNA synthetase [Novosphingobium nitrogenifigens DSM 19370]
          Length = 515

 Score =  136 bits (341), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 64/412 (15%), Positives = 132/412 (32%), Gaps = 79/412 (19%)

Query: 270 RKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKC---- 323
             G+ I++ +   M  +IK    +    P  +    +  ++ H D +   M  V      
Sbjct: 45  PWGYGIWERIQKLMDERIKAAGVDNCYFPLFIPLSFFAREADHVDGFAKEMAVVTHHRLI 104

Query: 324 --------ADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
                    D   K      ++P +     A     ++S+R+LP+   ++ +V R E   
Sbjct: 105 ADPERGLIPDPEAKLEEPLVVRPTSETVIGAAMARWIQSWRDLPLLTNQWANVVRWEMR- 163

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
                +R   F   + H     E             + +Y+ F                 
Sbjct: 164 -TRMFLRTSEFLWQEGHTAHADEADAMT---ETLRALEMYRSF----------------- 202

Query: 436 GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGT 495
                   AE+++   +        +R         GA      E +++D  G+  Q GT
Sbjct: 203 --------AEDVLALPVVAGPKPENERFP-------GAVATYSIEAMMQD--GKALQAGT 245

Query: 496 IQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWL 550
                          Y +   ++   V+ H   +G   R IG +I    ++     P  +
Sbjct: 246 SHYLGTTFAEAAGIRYQDKEGQQ---VLCHTTSWGVSTRMIGGVIMTHGDDDGLRTPPQV 302

Query: 551 SPIQAIVTTI------TSSAVEYAQEIANLLKSH-----HLSIETDFRNETINYKIREHS 599
           +P Q ++  +        + + Y +E+   L S       + +  D R      K     
Sbjct: 303 APHQIVILPMLRDNDGDEALLAYCEELRKALVSQSVFDEKVRVLLDKRPGKATAKRWGWV 362

Query: 600 IKKIPIIIICGDKEASERSIGIRRF-------GSTTTQKVSLLDAIPILTKE 644
            K +P+++  G ++A    + + R        G    + ++  + +   T E
Sbjct: 363 KKGVPLVLEIGGRDAENGQVSVVRRDRLWREDGKVDFKGIAREEFLATATSE 414


>gi|256956661|ref|ZP_05560832.1| prolyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|257090544|ref|ZP_05584905.1| prolyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|300861128|ref|ZP_07107215.1| proline--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|312903702|ref|ZP_07762876.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|256947157|gb|EEU63789.1| prolyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|256999356|gb|EEU85876.1| prolyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|300850167|gb|EFK77917.1| proline--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|310632894|gb|EFQ16177.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|315035640|gb|EFT47572.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0027]
 gi|315578695|gb|EFU90886.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0630]
          Length = 572

 Score =  136 bits (341), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 48/254 (18%), Positives = 100/254 (39%), Gaps = 16/254 (6%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++E   H+ L R   +  +A    G+  +     ++ + L + MR +
Sbjct: 4   SKMLIPTLREVPNDAEVLSHQILLRAGYIRQVAA---GIYSYLPLANRVLEKLKTIMREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +  D  E+  P +L   LW++SG +++Y  N++ +K  +D     R + L P +     
Sbjct: 61  FEKIDAVEMLMPALLPAELWKESGRYETYGPNLYRLKDRND-----RDYILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    + SY+ LP+ L +  + YR+E      GL+R R F   D + F   E   ++  
Sbjct: 116 ELIRDEINSYKRLPLNLYQIQTKYRDEKRPR-SGLLRGREFIMKDGYSFHADEASLDQSY 174

Query: 406 KIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
           + +      I++  G E   +           S      +E     +  + ++     + 
Sbjct: 175 RDYEKAYSRIFERCGLEFRAIIGDGGAMGGKDSKEFMAISEIGEDTICYSTESDYAANLE 234

Query: 465 TGVLLGEGAFYGPK 478
                   + Y PK
Sbjct: 235 MAT-----SLYTPK 243



 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/140 (16%), Positives = 49/140 (35%), Gaps = 9/140 (6%)

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG----NLPLWLSPIQAIVTTITSS-- 563
            V   + +   V++     G   R +  ++E        N P  ++P    V  +     
Sbjct: 425 TVLDENGREKSVIMGCYGIGVS-RLLSAIVEQNADERGINWPTGIAPFDLHVVQMNVKDE 483

Query: 564 -AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
              + +QE+  ++      +  D RNE    K  +  +   PI I  G K   +  + ++
Sbjct: 484 YQTKLSQEVEAMMIEAGYEVLVDDRNERAGVKFADADLIGCPIRITVGKKAV-DGVVEVK 542

Query: 623 RFGSTTTQKVSLLDAIPILT 642
              +    +V   +    L+
Sbjct: 543 IKRTGEMLEVRKEELESTLS 562


>gi|315032880|gb|EFT44812.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0017]
 gi|315150170|gb|EFT94186.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0012]
          Length = 572

 Score =  136 bits (341), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 48/254 (18%), Positives = 100/254 (39%), Gaps = 16/254 (6%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++E   H+ L R   +  +A    G+  +     ++ + L + MR +
Sbjct: 4   SKMLIPTLREVPNDAEVLSHQILLRAGYIRQVAA---GIYSYLPLANRVLEKLKTIMREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +  D  E+  P +L   LW++SG +++Y  N++ +K  +D     R + L P +     
Sbjct: 61  FEKIDAVEMLMPALLPAELWKESGRYETYGPNLYRLKDRND-----RDYILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    + SY+ LP+ L +  + YR+E      GL+R R F   D + F   E   ++  
Sbjct: 116 ELIRDEINSYKRLPLNLYQIQTKYRDEKRPR-SGLLRGREFIMKDGYSFHADEASLDQSY 174

Query: 406 KIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
           + +      I++  G E   +           S      +E     +  + ++     + 
Sbjct: 175 RDYEKAYSRIFERCGLEFRAIIGDGGAMGGKDSKEFMAISEIGEDTICYSTESDYAANLE 234

Query: 465 TGVLLGEGAFYGPK 478
                   + Y PK
Sbjct: 235 MAT-----SLYTPK 243



 Score = 64.0 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 23/140 (16%), Positives = 49/140 (35%), Gaps = 9/140 (6%)

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG----NLPLWLSPIQAIVTTITSS-- 563
            V   + +   V++     G   R +  ++E        N P  ++P    V  +     
Sbjct: 425 TVLDENGREKSVIMGCYGIGVS-RLLSAIVEQNADERGINWPTGIAPFDLHVVQMNVKDE 483

Query: 564 -AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
              + +QE+  ++      +  D RNE    K  +  +   PI I  G K   +  + ++
Sbjct: 484 YQTKLSQEVEAMMTEAGYEVLVDDRNERAGVKFADADLIGCPIRITVGKKAV-DGVVEVK 542

Query: 623 RFGSTTTQKVSLLDAIPILT 642
              +    +V   +    L+
Sbjct: 543 IKRTGEMLEVRKEELESTLS 562


>gi|281424584|ref|ZP_06255497.1| phosphoribulokinase family protein [Prevotella oris F0302]
 gi|281401255|gb|EFB32086.1| phosphoribulokinase family protein [Prevotella oris F0302]
          Length = 586

 Score =  136 bits (341), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 44/242 (18%), Positives = 94/242 (38%), Gaps = 3/242 (1%)

Query: 1   MPSDIKLTFPDGSIKN-FPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-S 58
           M   +++   +        + +T SD+    +  +    +   +N KV  +   V     
Sbjct: 34  MKQAVQIRCKNNKKTEKVAIGSTLSDIFSQFNLPMPYGPICAKVNNKVEGMHYRVYHSKD 93

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           +E +    P +      +   ++ +AV  ++P+  V I   + +G+Y +     P    +
Sbjct: 94  VEFLDMHSPSASRNYTRTLFFVLCKAVHDLYPKSYVIIDIPVSNGYYVNLQLGHPVEQTD 153

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           + +I ++MQEII    P  +  +  E+A ++F  + +  K ++LES   K   T Y   +
Sbjct: 154 VDRICRRMQEIIDAHMPVKRFEVPAEQAIKMFRDRGDEAKAKLLES-AGKLYTTYYEIDD 212

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D   G  + +T  +  F       G   R  S             +   E+ +  +  
Sbjct: 213 YVDFYYGSLLTNTRSLYLFGLDKYYDGLLLRIPSIENPGVLPEIIRQDKMFEIFKEHHRW 272

Query: 239 EE 240
           +E
Sbjct: 273 QE 274


>gi|57234857|ref|YP_181114.1| prolyl-tRNA synthetase [Dehalococcoides ethenogenes 195]
 gi|114152187|sp|Q3Z9I5|SYP_DEHE1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|57225305|gb|AAW40362.1| prolyl-tRNA synthetase [Dehalococcoides ethenogenes 195]
          Length = 569

 Score =  136 bits (341), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 49/217 (22%), Positives = 92/217 (42%), Gaps = 11/217 (5%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DD 290
                   ++E   H+ L R      IA+  +GV  +    W+  Q + + +R+++    
Sbjct: 9   KTQREIPSDAETISHQLLLRSGM---IAQLTAGVYSFMPLAWRSIQKIENIIRQEMNKSG 65

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH 350
            +E+  P +    +WQQSG    +   +F +K   D     R   L P +      + + 
Sbjct: 66  CQELAMPVLQPVEIWQQSGREAPFGQTLFHLKDRKD-----RNLVLGPTHEEVITDLASR 120

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHN 409
            ++SYR+LP RL +  + +R+EP     GL+RVR F   D + F  + E +      +  
Sbjct: 121 YIQSYRDLPQRLYQIQTKFRDEPRPR-GGLIRVREFIMKDMYSFDASPEGLDESYQTMKQ 179

Query: 410 LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
              ++Y+  G E +++   +       S      AE+
Sbjct: 180 AYENVYRRCGLESMVIDADSGAIGGKASHEFMIVAES 216



 Score = 84.1 bits (206), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 64/164 (39%), Gaps = 10/164 (6%)

Query: 486 AIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFK 543
           A  R  + G I  +   L  RF A + ++     HP+++     G + R +   IE N  
Sbjct: 398 ASKRGVEVGHIFKLGTFLSERFGANFTDAEGI-SHPIIMGCYGMG-VGRLLAAAIEQNHD 455

Query: 544 GNLPLWL---SPIQAIVTT---ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
               +W    +P Q  +        +  + A++I   L++  + +  D R  T   K  +
Sbjct: 456 EKGIIWPMPIAPYQIYICGLFLDNPAVSQAAEKIYTELEAQGVEVLFDDRELTAGVKFND 515

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
             +  IP+ +    +   +  + ++   +  ++ V L   +  +
Sbjct: 516 ADLLGIPLRLTISPRNLDKGGVELKLRRNKESELVPLESIMERV 559


>gi|229545199|ref|ZP_04433924.1| prolyl-tRNA synthetase [Enterococcus faecalis TX1322]
 gi|256853721|ref|ZP_05559086.1| prolyl-tRNA synthetase [Enterococcus faecalis T8]
 gi|257079587|ref|ZP_05573948.1| prolyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|294779463|ref|ZP_06744861.1| proline--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|307270862|ref|ZP_07552149.1| prolyl-tRNA synthetase [Enterococcus faecalis TX4248]
 gi|307287732|ref|ZP_07567775.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0109]
 gi|307291052|ref|ZP_07570938.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0411]
 gi|229309744|gb|EEN75731.1| prolyl-tRNA synthetase [Enterococcus faecalis TX1322]
 gi|256710664|gb|EEU25707.1| prolyl-tRNA synthetase [Enterococcus faecalis T8]
 gi|256987617|gb|EEU74919.1| prolyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|294453469|gb|EFG21873.1| proline--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|306497901|gb|EFM67432.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0411]
 gi|306501470|gb|EFM70773.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0109]
 gi|306512775|gb|EFM81420.1| prolyl-tRNA synthetase [Enterococcus faecalis TX4248]
 gi|315030982|gb|EFT42914.1| prolyl-tRNA synthetase [Enterococcus faecalis TX4000]
          Length = 572

 Score =  136 bits (341), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 48/254 (18%), Positives = 100/254 (39%), Gaps = 16/254 (6%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++E   H+ L R   +  +A    G+  +     ++ + L + MR +
Sbjct: 4   SKMLIPTLREVPNDAEVLSHQILLRAGYIRQVAA---GIYSYLPLANRVLEKLKTIMREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +  D  E+  P +L   LW++SG +++Y  N++ +K  +D     R + L P +     
Sbjct: 61  FEKIDAVEMLMPALLPAELWKESGRYETYGPNLYRLKDRND-----RDYILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    + SY+ LP+ L +  + YR+E      GL+R R F   D + F   E   ++  
Sbjct: 116 ELIRDEINSYKRLPLNLYQIQTKYRDEKRPR-SGLLRGREFIMKDGYSFHADEASLDQSY 174

Query: 406 KIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
           + +      I++  G E   +           S      +E     +  + ++     + 
Sbjct: 175 RDYEKAYSRIFERCGLEFRAIIGDGGAMGGKDSKEFMAISEIGEDTICYSTESDYAANLE 234

Query: 465 TGVLLGEGAFYGPK 478
                   + Y PK
Sbjct: 235 MAT-----SLYTPK 243



 Score = 64.0 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 23/140 (16%), Positives = 49/140 (35%), Gaps = 9/140 (6%)

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG----NLPLWLSPIQAIVTTITSS-- 563
            V   + +   V++     G   R +  ++E        N P  ++P    V  +     
Sbjct: 425 TVLDENGREKSVIMGCYGIGVS-RLLSAIVEQNADERGINWPTGIAPFDLHVVQMNVKDE 483

Query: 564 -AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
              + +QE+  ++      +  D RNE    K  +  +   PI I  G K   +  + ++
Sbjct: 484 YQTKLSQEVEAMMTEAGYEVLVDDRNERAGVKFADADLIGCPIRITVGKKAV-DGVVEVK 542

Query: 623 RFGSTTTQKVSLLDAIPILT 642
              +    +V   +    L+
Sbjct: 543 IKRTGEMLEVRKEELESTLS 562


>gi|257087410|ref|ZP_05581771.1| prolyl-tRNA synthetase [Enterococcus faecalis D6]
 gi|256995440|gb|EEU82742.1| prolyl-tRNA synthetase [Enterococcus faecalis D6]
 gi|315025439|gb|EFT37371.1| prolyl-tRNA synthetase [Enterococcus faecalis TX2137]
          Length = 572

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 48/254 (18%), Positives = 100/254 (39%), Gaps = 16/254 (6%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++E   H+ L R   +  +A    G+  +     ++ + L + MR +
Sbjct: 4   SKMLIPTLREVPNDAEVLSHQILLRAGYIRQVAA---GIYSYLPLANRVLEKLKTIMREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +  D  E+  P +L   LW++SG +++Y  N++ +K  +D     R + L P +     
Sbjct: 61  FEKIDAVEMLMPALLPAELWKESGRYETYGPNLYRLKDRND-----RDYILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    + SY+ LP+ L +  + YR+E      GL+R R F   D + F   E   ++  
Sbjct: 116 ELIRDEINSYKRLPLNLYQIQTKYRDEKRPR-SGLLRGREFIMKDGYSFHADEASLDQSY 174

Query: 406 KIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
           + +      I++  G E   +           S      +E     +  + ++     + 
Sbjct: 175 RDYEKAYSRIFERCGLEFRAIIGDGGAMGGKDSKEFMAISEIGEDTICYSTESDYAANLE 234

Query: 465 TGVLLGEGAFYGPK 478
                   + Y PK
Sbjct: 235 MAT-----SLYTPK 243



 Score = 64.0 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 23/140 (16%), Positives = 49/140 (35%), Gaps = 9/140 (6%)

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG----NLPLWLSPIQAIVTTITSS-- 563
            V   + +   V++     G   R +  ++E        N P  ++P    V  +     
Sbjct: 425 TVLDENGREKSVIMGCYGIGVS-RLLSAIVEQNADEHGINWPTGIAPFDLHVVQMNVKDE 483

Query: 564 -AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
              + +QE+  ++      +  D RNE    K  +  +   PI I  G K   +  + ++
Sbjct: 484 YQTKLSQEVEAMMTEAGYEVLVDDRNERAGVKFADADLIGCPIRITVGKKAV-DGVVEVK 542

Query: 623 RFGSTTTQKVSLLDAIPILT 642
              +    +V   +    L+
Sbjct: 543 IKRTGEMLEVRKEELESTLS 562


>gi|229047505|ref|ZP_04193095.1| Prolyl-tRNA synthetase [Bacillus cereus AH676]
 gi|229081074|ref|ZP_04213584.1| Prolyl-tRNA synthetase [Bacillus cereus Rock4-2]
 gi|229111290|ref|ZP_04240843.1| Prolyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|229191988|ref|ZP_04318958.1| Prolyl-tRNA synthetase [Bacillus cereus ATCC 10876]
 gi|228591539|gb|EEK49388.1| Prolyl-tRNA synthetase [Bacillus cereus ATCC 10876]
 gi|228672066|gb|EEL27357.1| Prolyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|228702118|gb|EEL54594.1| Prolyl-tRNA synthetase [Bacillus cereus Rock4-2]
 gi|228723752|gb|EEL75107.1| Prolyl-tRNA synthetase [Bacillus cereus AH676]
          Length = 566

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 89/203 (43%), Gaps = 11/203 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R +++     E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K      ++ R FAL   +      +    +KSY++L
Sbjct: 74  MQAAELWQESGRWYSYGSELMRMKD-----RNAREFALGATHEEVITDLVRDEVKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKD 417
           P+ L +  + +R+E      GL+R R F   DA+ F  T+E +     +++    +I+  
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEVYDRLYKAYSNIFAR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDAL 440
            G     V   +       +   
Sbjct: 188 CGLNFRAVIADSGAMGGKDTHEF 210



 Score = 79.4 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 61/157 (38%), Gaps = 11/157 (7%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G +  +        NA +++ +  K  P+++     G   R +  + E F     
Sbjct: 404 RGIEVGHVFKLGTRYSEAMNATFLDENG-KTQPLIMGCYGIGVS-RTVAAIAEQFNDENG 461

Query: 546 --LPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              P  ++P    V  +   + +  E  + I N L+     +  D R E    K  +  +
Sbjct: 462 LVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERAGVKFADADL 521

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
             +P+ +  G K A E  + ++   +  +++V + + 
Sbjct: 522 FGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEEL 557


>gi|325295715|ref|YP_004282229.1| Prolyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM
           11699]
 gi|325066163|gb|ADY74170.1| Prolyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM
           11699]
          Length = 576

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 52/221 (23%), Positives = 85/221 (38%), Gaps = 11/221 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  +        ++E   H+ L R      I +  SG+      G K+   +   +R 
Sbjct: 3   FSRAFIPTMKESPADAEIPSHKLLIRAG---FIRKKASGLYDILPLGVKVLLKIEKVIRE 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +E+  P +    LW +SG WD Y   M   K   D     R +AL P      
Sbjct: 60  EMNKAGAQEVILPIMHPAELWIESGRWDVYGKEMIKFKDRHD-----RDYALGPTAEEMI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNE 403
             +    +KSY++LP+ L + G  +R+E      GLMR R F   DA+ F  + E    E
Sbjct: 115 TDLVRKEVKSYKDLPLNLYQIGRKFRDEIRPRF-GLMRAREFIMKDAYSFHASNEDAERE 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
              ++     I++  G     V+  T       S      A
Sbjct: 174 YWNMYETYSRIFRKMGLVFKAVEADTGEIGGKFSHEFMVIA 214



 Score = 96.8 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 78/202 (38%), Gaps = 11/202 (5%)

Query: 448 MKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFN 507
           +K V         + ++   + GE     PK    L +  G +      ++        N
Sbjct: 367 LKNVNWERDFEVTEFVDFAEVKGEDP--CPKCAAPLIEKRGIEV-GHIFKLGTKYSQAMN 423

Query: 508 AFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL---SPIQAIVTTIT--- 561
           A +V+    K  P+++     G        + +N+  N  +W    +P + IV  +    
Sbjct: 424 ATFVDEDG-KEKPMVMGCYGIGVTRVMAAAVEQNYDENGIIWPVEIAPFEVIVIPVNVKK 482

Query: 562 SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
              +E A+ I + L+ +   +  D RN    +K ++  +  IP  II G K A E  + I
Sbjct: 483 EEIIETAENIYDELQKNGFDVAIDDRNARPGFKFKDADLIGIPYQIIVGKK-AGEGVVEI 541

Query: 622 RRFGSTTTQKVSLLDAIPILTK 643
           +   +    ++++   +  + +
Sbjct: 542 KVRKTGERFEIAVNKVVEKIGE 563


>gi|227551759|ref|ZP_03981808.1| proline--tRNA ligase [Enterococcus faecium TX1330]
 gi|227179064|gb|EEI60036.1| proline--tRNA ligase [Enterococcus faecium TX1330]
          Length = 569

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 46/221 (20%), Positives = 90/221 (40%), Gaps = 11/221 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++E   H+ L R   +  ++    G+  +     ++ + L   MR +
Sbjct: 4   SKMLIPTLREVPNDAEVLSHQILLRAGYIRQVSA---GIYSYLPLANRVLEKLKRIMREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +     E+  P +L   LW++SG +++Y  N++  K  +D     R   L P +     
Sbjct: 61  FEKIGAVEMLMPAILPAELWEESGRYETYGPNLYRFKDRND-----RKMILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +  + + SY++LP+ L +    YR+E      GL+R R F   DA+ F   E+  +E  
Sbjct: 116 DLMRNEINSYKKLPLNLYQIQPKYRDEKRPRF-GLLRGREFIMKDAYSFHATEESLDETY 174

Query: 406 KIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
           K +      ++K  G E   +           S      +E
Sbjct: 175 KDYEKAYTEVFKRCGLEFRSIIGDGGAMGGKDSKEFMAISE 215



 Score = 61.3 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 22/160 (13%), Positives = 47/160 (29%), Gaps = 9/160 (5%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I  +         A  ++ +  +   V++     G       I+ ++      
Sbjct: 404 RGIEIGHIFKIGTRYSESMGATVLDENG-REKFVIMGCYGIGVSRLLSAIVEQHSDEQGI 462

Query: 548 LWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            W    +P    +  +            E+   +      +  D RNE    K  +  + 
Sbjct: 463 NWPKGIAPFDLHIVQMNLKDEYQTNLTNELEEAMTKAGYEVLVDDRNERAGVKFADSDLI 522

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
             PI I  G K      + ++   +    +V   +    L
Sbjct: 523 GCPIRITVGKKAVE-GIVEVKIKKTGEMVEVRKEELANTL 561


>gi|56475942|ref|YP_157531.1| prolyl-tRNA synthetase [Aromatoleum aromaticum EbN1]
 gi|81821206|sp|Q5P7T1|SYP_AZOSE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|56311985|emb|CAI06630.1| prolyl-tRNA synthetase [Aromatoleum aromaticum EbN1]
          Length = 583

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 51/256 (19%), Positives = 94/256 (36%), Gaps = 26/256 (10%)

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLF--HIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
              +QY     +    D   +++++ L    I +  +G+  +   G ++ + +   +R +
Sbjct: 1   MRASQYFISTLKEAPSDAEVVSQKLMLRAGFIRKVAAGIYSYLPIGLRVIRKVEDIVRDE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P V    LW ++G W+   A M   K      +  R FAL+P +     
Sbjct: 61  MNRAGALELTMPLVQPAELWDETGRWEQMGAEMLRFKD-----RHQRDFALQPTSEEVVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    LKSYR+LP    +  + +R+E      G+MR R FT  DA+ F           
Sbjct: 116 DIARQELKSYRQLPKNFYQIQTKFRDERRPRF-GVMRGREFTMKDAYSFDRDVAAAGRSY 174

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
             ++     I+   G      +        +G D   +            I ++ +D I 
Sbjct: 175 DAMYAAYCRIFDRLGLTY---RAVAADTGAIGGDRSHE---------FQVIADTGEDAIV 222

Query: 465 TGVLLGEGAFYGPKFE 480
                  G+ Y    E
Sbjct: 223 Y----CPGSDYAANIE 234



 Score = 74.4 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 25/165 (15%), Positives = 60/165 (36%), Gaps = 11/165 (6%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           AI R  + G +  +        NA +++ + +  H  M    +   + R +G  IE    
Sbjct: 413 AIQRGIEVGHVFYLGTKYSQSMNATFLDENGKPKHFEMGCYGI--GVTRILGAAIEQNHD 470

Query: 545 N----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                 P  ++P + +V  +    + +    A ++   L +  + +  D R+E       
Sbjct: 471 ARGIIWPDAIAPFRVVVCPVGWGKSDAVRTEATKLYETLCAGGIDVILDDRDERPGVMFA 530

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           +  +  +P  ++ GD+   +     +        K+ L +    +
Sbjct: 531 DWELIGVPHRVVIGDRGLKDGMAEYQGRRDAEAAKIPLAELAAFV 575


>gi|257887080|ref|ZP_05666733.1| prolyl-tRNA synthetase [Enterococcus faecium 1,141,733]
 gi|257895645|ref|ZP_05675298.1| prolyl-tRNA synthetase [Enterococcus faecium Com12]
 gi|293377744|ref|ZP_06623933.1| proline--tRNA ligase [Enterococcus faecium PC4.1]
 gi|257823134|gb|EEV50066.1| prolyl-tRNA synthetase [Enterococcus faecium 1,141,733]
 gi|257832210|gb|EEV58631.1| prolyl-tRNA synthetase [Enterococcus faecium Com12]
 gi|292643744|gb|EFF61865.1| proline--tRNA ligase [Enterococcus faecium PC4.1]
          Length = 569

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 46/221 (20%), Positives = 90/221 (40%), Gaps = 11/221 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++E   H+ L R   +  ++    G+  +     ++ + L   MR +
Sbjct: 4   SKMLIPTLREVPNDAEVLSHQILLRAGYIRQVSA---GIYSYLPLANRVLEKLKRIMREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +     E+  P +L   LW++SG +++Y  N++  K  +D     R   L P +     
Sbjct: 61  FEKIGAVEMLMPAILPAELWEESGRYETYGPNLYRFKDRND-----RKMILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +  + + SY++LP+ L +    YR+E      GL+R R F   DA+ F   E+  +E  
Sbjct: 116 DLMRNEINSYKKLPLNLYQIQPKYRDEKRPRF-GLLRGREFIMKDAYSFHATEESLDETY 174

Query: 406 KIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
           K +      ++K  G E   +           S      +E
Sbjct: 175 KDYEKAYTEVFKRCGLEFRSIIGDGGAMGGKDSKEFMAISE 215



 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 22/160 (13%), Positives = 47/160 (29%), Gaps = 9/160 (5%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I  +         A  ++ +  +   V++     G       I+ ++      
Sbjct: 404 RGIEIGHIFKIGTRYSESMGATVLDENG-REKFVIMGCYGIGVSRLLSAIVEQHSDEQGI 462

Query: 548 LWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            W    +P    +  +            E+   +      +  D RNE    K  +  + 
Sbjct: 463 NWPKGIAPFDLHIVQMNLKDEYQTNLTNELEEAMTKAGYEVLVDDRNERAGVKFADSDLI 522

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
             PI I  G K      + ++   +    +V   +    L
Sbjct: 523 GCPIRITVGKKAVE-GIVEVKIKKTGEMVEVRKEELANTL 561


>gi|78065148|ref|YP_367917.1| prolyl-tRNA synthetase [Burkholderia sp. 383]
 gi|114152177|sp|Q39JU3|SYP_BURS3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|77965893|gb|ABB07273.1| Prolyl-tRNA synthetase [Burkholderia sp. 383]
          Length = 578

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 56/287 (19%), Positives = 106/287 (36%), Gaps = 13/287 (4%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ + R   +  +A    G+  +   G +  + + + +R ++      E+  P 
Sbjct: 17  DAEIVSHKLMVRAGMIRRVA---GGIYNYLPVGLRSIRKVEAIVREEMNRAGGIELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    LWQ+SG W+ Y   +   K   D       F + P +      +  + +KSYR++
Sbjct: 74  VQPAELWQESGRWEQYGPELLRFKDRKDN-----DFVIGPTHEEVITDIARNQIKSYRQM 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKD 417
           PV   +  + +R+E      G+MR R F   DA+ F       NE   K+++  + I+  
Sbjct: 129 PVNFYQIQTKFRDEIRPRF-GVMRGREFIMKDAYSFDKDAAGLNESYRKMYDAYVRIFTR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
            G E   V   +       S      A+     +     +     I     L   A    
Sbjct: 188 LGLEFRAVAADSGSIGGNFSHEFHVIADTGEDAIAYCPTSEFAANIEAAEALPLIAERAA 247

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLP--SRFNAFYVNSHSEKCHPVM 522
             E + K A     +C  +     +P      +  + + +E   P +
Sbjct: 248 PAEAMEKVATPGKAKCEAVAELLAIPLERTIKSIVLATDNEGAEPTI 294



 Score = 78.3 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 24/154 (15%), Positives = 56/154 (36%), Gaps = 11/154 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNL 546
           R  + G + Q+         A +++   +   P+++     G   R +G  IE NF    
Sbjct: 409 RGIEVGHVFQLGTKYSEAMGATFLDESGKPQ-PMLMGCYGVGVT-RILGAAIEQNFDDKG 466

Query: 547 PLWL---SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
            +W    +P + ++  +    +    E A ++   L +  + +  D R E       +  
Sbjct: 467 IIWPESIAPFEVVLCPMGYDRSDMVRETADKLYAELVAAGIDVILDDRGERPGVMFADWE 526

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
           +  +P  ++ G++   E  I  +         + 
Sbjct: 527 LIGVPHRLVIGERGLKEGKIEYQGRRDAEATLLP 560


>gi|15614982|ref|NP_243285.1| prolyl-tRNA synthetase [Bacillus halodurans C-125]
 gi|81857777|sp|Q9KA71|SYP_BACHD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|10175039|dbj|BAB06138.1| prolyl-tRNA synthetase [Bacillus halodurans C-125]
          Length = 569

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 44/218 (20%), Positives = 90/218 (41%), Gaps = 11/218 (5%)

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK 288
             +        +++   H+ + R   +  +A    G+  +     ++ + + S +R ++ 
Sbjct: 6   FLVPTMREVPADADVVSHQLMLRAGMIRQVAA---GIYTYLPLARRVIRKIESIVREELD 62

Query: 289 D-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
               +EI  P +    LWQ+SG W+ Y   +  +     T +  R FAL P +     ++
Sbjct: 63  QTGAQEITMPTLHPAELWQESGRWEKYGDELMRL-----TDRHNRQFALGPTHEEVITSL 117

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK- 406
               + SY++LP+ + +  S +R+E      GL+R R F   DA+ F T  +  +E  K 
Sbjct: 118 IRDSINSYKKLPLNVYQIQSKFRDERRPRF-GLLRGREFIMKDAYSFHTGGESLDEMYKV 176

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
           +++    I++  G     V   +       +      A
Sbjct: 177 MYDAYSRIFRRAGLNVRPVIADSGAIGGKDTHEFMALA 214



 Score = 80.6 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 23/152 (15%), Positives = 57/152 (37%), Gaps = 10/152 (6%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPI 553
           +      +  A +++ +  K  P+++     G   R +  +IE          P  ++P 
Sbjct: 413 LGTVYSEKLGATFLDENG-KSQPMLMGCYGIGVS-RMVAAVIEQHHDEDGIVWPTSVAPF 470

Query: 554 QAIVT---TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
              V          ++ A  + + L+   L +  D R E    K ++  +  +P+ +  G
Sbjct: 471 DVHVLALNVKKEEQMKLADSVYHSLQQAGLDVLLDDRPERAGVKFKDADLIGLPLRVAVG 530

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            + A E  + ++   +    +V   + +P + 
Sbjct: 531 KR-ADEGYVEVKVRKTGEVIEVHADELVPTIQ 561


>gi|261212071|ref|ZP_05926357.1| prolyl-tRNA synthetase [Vibrio sp. RC341]
 gi|260838679|gb|EEX65330.1| prolyl-tRNA synthetase [Vibrio sp. RC341]
          Length = 546

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 42/210 (20%), Positives = 83/210 (39%), Gaps = 8/210 (3%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYR 315
            I +  SG+  W   G ++ + + + +R++I      E   P V    LW+++G  +   
Sbjct: 6   MIRKLASGLYTWLPTGLRVLRKVETIVRQEIDNAGAIETLMPVVQPFELWEETGRSEKMG 65

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
             +        T +  R F L P       A+  + + SY++LP+ L +  + +R+E   
Sbjct: 66  PELLRF-----TDRHERPFVLSPTAEEVITALVRNEVNSYKQLPLNLYQIQTKFRDERRP 120

Query: 376 SLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              G+MR R F+  DA+ F    + +      +H      +   G +   V   +     
Sbjct: 121 RF-GVMRAREFSMMDAYSFDIDKDGLQKSYDAMHAAYCKAFDRMGLDYRPVLADSGAIGG 179

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            GS      AE+    ++ + ++     I 
Sbjct: 180 NGSQEFHVLAESGEDLIVFSTESDYAANIE 209



 Score = 87.9 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 63/166 (37%), Gaps = 13/166 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           + R  + G I Q+  N   + N   ++S+ +    V++    +G  + R +   IE    
Sbjct: 380 LKRGIEVGHIFQLGTNYSEKMNCGVLDSNGKN---VILEMGCYGIGVSRVVAAAIEQNHD 436

Query: 545 N----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +     P  L+P Q  +  +    +    E A+++   L +  + +  D R E       
Sbjct: 437 DYGIIWPDALAPFQVAIVPMNMHKSERVQEAAEKLYAELTAAGIEVLFDDRKERPGVMFS 496

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +  +  +P  II GD+   E     +       + V++   I  + 
Sbjct: 497 DMELIGVPHTIIIGDRSMDEGHFEYKNRRQGEKEAVAMESIIDFIQ 542


>gi|270307741|ref|YP_003329799.1| prolyl-tRNA synthetase [Dehalococcoides sp. VS]
 gi|270153633|gb|ACZ61471.1| prolyl-tRNA synthetase [Dehalococcoides sp. VS]
          Length = 569

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 50/217 (23%), Positives = 92/217 (42%), Gaps = 11/217 (5%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DD 290
                   ++E   H+ L R      IA+  +GV  +    W+  Q + + +R+++    
Sbjct: 9   KTQREIPSDAETISHQLLLRSGM---IAQLTAGVYSFMPLAWRSIQKIENIIRQEMNKSG 65

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH 350
            +E+  P +    +WQQSG    +   +F +K   D     R   L P +      + + 
Sbjct: 66  CQELAMPVLQPVEIWQQSGREAPFGQTLFHLKDRKD-----RNLVLGPTHEEVITDLASR 120

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHN 409
            ++SYR+LP RL +  + +R+EP     GL+RVR F   D + F  + E +      +  
Sbjct: 121 YIQSYRDLPQRLYQIQTKFRDEPRPR-GGLIRVREFIMKDMYSFDASPEGLDESYQTMKQ 179

Query: 410 LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
              S+Y+  G E +++   +       S      AE+
Sbjct: 180 AYESVYRRCGLESMVIDADSGAIGGKASHEFMIVAES 216



 Score = 85.2 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 28/164 (17%), Positives = 64/164 (39%), Gaps = 10/164 (6%)

Query: 486 AIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFK 543
           A  R  + G I  +   L  RF A + ++     HP+++     G + R +   IE N  
Sbjct: 398 ASKRGVEVGHIFKLGTFLSERFGANFTDAEGI-SHPIIMGCYGMG-VGRLLAAAIEQNHD 455

Query: 544 GNLPLWL---SPIQAIVTT---ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
               +W    +P Q  +        +  + A+++   L++  + +  D R  T   K  +
Sbjct: 456 EKGIIWPMPIAPYQVYICGLFLDKPAVSQAAEKMYAELEAQGVEVLFDDRELTAGVKFND 515

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
             +  IP+ +    +   +  + ++   +   + V L + +  +
Sbjct: 516 ADLLGIPLRLTISPRNLDKGGVELKLRRNKEAELVPLDNIVEKV 559


>gi|229180095|ref|ZP_04307439.1| Prolyl-tRNA synthetase [Bacillus cereus 172560W]
 gi|228603304|gb|EEK60781.1| Prolyl-tRNA synthetase [Bacillus cereus 172560W]
          Length = 566

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 89/203 (43%), Gaps = 11/203 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R +++     E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K      ++ R FAL   +      +    +KSY++L
Sbjct: 74  MQAAELWQESGRWYSYGSELMRMKD-----RNAREFALGATHEEVITDLVRDEVKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKD 417
           P+ L +  + +R+E      GL+R R F   DA+ F  T+E +     +++    +I+  
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEVYDRLYKAYSNIFAR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDAL 440
            G     V   +       +   
Sbjct: 188 CGLNFRAVIADSGAMGGKDTHEF 210



 Score = 79.4 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 61/157 (38%), Gaps = 11/157 (7%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G +  +        NA +++ +  K  P+++     G   R +  + E F     
Sbjct: 404 RGIEVGHVFKLGTRYSEAMNATFLDENG-KTQPLIMGCYGIGVS-RTVAAIAEQFNDENG 461

Query: 546 --LPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              P  ++P    V  +   + +  E  + I N L+     +  D R E    K  +  +
Sbjct: 462 LVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERAGVKFADADL 521

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
             +P+ +  G K A E  + ++   +  +++V + + 
Sbjct: 522 FGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEEL 557


>gi|313633402|gb|EFS00238.1| prolyl-tRNA synthetase [Listeria seeligeri FSL N1-067]
          Length = 568

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 48/243 (19%), Positives = 92/243 (37%), Gaps = 25/243 (10%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E + H+ L R   +   A   SG+  +        + + + +R +++     E+  P 
Sbjct: 17  DAEVKSHQLLLRAGFIRQTA---SGIYSYLPLATLTLRKIETIIREELEAVGAAELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W+ Y   +  +K      +  R FAL P +     A+    +KSY+ L
Sbjct: 74  LQPAELWQESGRWNDYGPELMRLKD-----RASRDFALGPTHEEVITALLRDEIKSYKRL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+ L +  + +R+E      GL+R R F   DA+ F    +  +E   + +   S    F
Sbjct: 129 PLTLYQIQTKFRDEKRPRF-GLLRGREFIMKDAYSFHATNESLDEVYDLMHQAYS--NIF 185

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
               +  +        +G     +         L  I   +       +   + + Y   
Sbjct: 186 TRCGLEFRSVIADSGSIGGKETQEFV------ALSDIGEDT-------IAYSDASDYAAN 232

Query: 479 FEY 481
            E 
Sbjct: 233 VEM 235



 Score = 77.5 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 79/217 (36%), Gaps = 20/217 (9%)

Query: 444 AENIMKGVLDTIKNSSQDRINTG-VLLGEGAFYGPKFEYIL-------KDAIG-----RD 490
           A+N +K +++ +  +++D  +   V           F+  +        D  G       
Sbjct: 346 ADNAVKDLVNAVAGANEDGFHYTNVNPTRDFEVVSYFDLRMIQVGDLSPDGQGVIKFAEG 405

Query: 491 WQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW- 549
            + G I       S+     V   + +  P+++     G       I  ++   N  +W 
Sbjct: 406 IEVGHIFKLGTKYSQAMNATVLDENGRAQPIIMGCYGIGVSRILSAIAEQSNDENGLVWD 465

Query: 550 --LSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             +SP    +  +   +   V +A+ +   L+    S+  D R+E    K  +  +  +P
Sbjct: 466 KKISPFDLHLIPVNMKSEEQVAFAETLYQSLQQAGFSVLIDDRSERAGVKFADADLIGLP 525

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           I I  G K A+E  + ++   +    +V   + +  L
Sbjct: 526 IRITVGKK-AAEGIVEVKIRKTGEMIEVRQDELLNTL 561


>gi|296171596|ref|ZP_06852836.1| proline--tRNA ligase [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295894051|gb|EFG73813.1| proline--tRNA ligase [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 582

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 55/362 (15%), Positives = 120/362 (33%), Gaps = 30/362 (8%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +  +A    G+  W   G ++ + +   +R ++     +EI  P 
Sbjct: 19  DAEVPSHKLLIRAGYIRPVA---PGLYSWLPLGLRVLRRIERIVREEMDAIGGQEILFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++ +  W  Y   +F +K      +    + L P +             SY++ 
Sbjct: 76  LLPRAPYETTNRWTEYGDGVFRLKD-----RRGNDYLLGPTHEELFTLTVKGEYSSYKDF 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKD 417
           PV L +  + YR+E      G++RVR F   D++ F   +         H      I+  
Sbjct: 131 PVLLYQIQNKYRDEARPR-AGILRVREFLMKDSYSFDIDDAGLKAAYHAHREAYQRIFNR 189

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDA---ENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
                ++V   +       S+    ++   E+     L++   ++ + + T         
Sbjct: 190 LRVRYVIVSAVSGAMGGSASEEFLAESPVGEDTFVRCLESGYAANVEAVVTARPETRP-- 247

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
                E +    +       TI       +        + ++    V++     G     
Sbjct: 248 ----IEGLPDAVVHDTGDTPTIATLVEWANTAGLDRAVTAADTLKNVLLKVRQPGGEWDL 303

Query: 535 IGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIA-----NLLKSHHLSIETD 585
           + I +    E     L   L P    +    +   +Y   +        L+ + +    D
Sbjct: 304 LAIGLPGDREVDDKRLGAALEPADYALL-DDADFAKYPFLVKGYIGPKALQDNGVRYLVD 362

Query: 586 FR 587
            R
Sbjct: 363 PR 364



 Score = 76.7 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 59/174 (33%), Gaps = 16/174 (9%)

Query: 484 KDAIGRDWQCGTI---QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG-SIERFIGIMI 539
            D  G       I    +        +AF  +   E   PV +    +G  + R + ++ 
Sbjct: 409 PDGAGPLVSARGIEVAHIFQLGRKYTDAFAADVLGEDGKPVRLTMGSYGLGVSRMVAVIA 468

Query: 540 ENFKG----NLPLWLSPIQAIVTTITSSAVEY--AQEIANLLKSHHLSIETDFRNETINY 593
           E          P  ++P    +      A     A  +A  L    + +  D R  +   
Sbjct: 469 EQHHDELGLRWPSSVAPFDVHLVIANKDAEARTGATGLATDLDRLGVEVLLDDRQASPGV 528

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL-----LDAIPILT 642
           K ++  +  +P I++ G +  +   + +R      T+++++      D +  L 
Sbjct: 529 KFKDAELLGVPWILVVG-RGWANGVVELRDRFGGQTRELAVGPSLATDVVAALA 581


>gi|293556646|ref|ZP_06675211.1| prolyl-tRNA synthetase [Enterococcus faecium E1039]
 gi|291601181|gb|EFF31468.1| prolyl-tRNA synthetase [Enterococcus faecium E1039]
          Length = 569

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 46/221 (20%), Positives = 90/221 (40%), Gaps = 11/221 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++E   H+ L R   +  ++    G+  +     ++ + L   MR +
Sbjct: 4   SKILIPTLREVPNDAEVLSHQILLRAGYIRQVSA---GIYSYLPLANRVLEKLKRIMREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +     E+  P +L   LW++SG +++Y  N++  K  +D     R   L P +     
Sbjct: 61  FEKIGAVEMLMPAILPAELWEESGRYETYGPNLYRFKDRND-----RKMILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +  + + SY++LP+ L +    YR+E      GL+R R F   DA+ F   E+  +E  
Sbjct: 116 DLMRNEINSYKKLPLNLYQIQPKYRDEKRPRF-GLLRGREFIMKDAYSFHATEESLDETY 174

Query: 406 KIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
           K +      ++K  G E   +           S      +E
Sbjct: 175 KDYEKAYTEVFKRCGLEFRSIIGDGGAMGGKDSKEFMAISE 215



 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/160 (13%), Positives = 48/160 (30%), Gaps = 9/160 (5%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I  +         A  ++ +  +   V++     G       I+ ++      
Sbjct: 404 RGIEIGHIFKIGTRYSESMGATVLDENG-REKFVIMGCYGIGVSRLLSAIVEQHSDEQGI 462

Query: 548 LWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            W    +P    +  +            E+   +      +  D RNE    K  +  + 
Sbjct: 463 NWPKGIAPFDLHIVQMNLKDEYQTSLTNELEEAMTKAGYEVLVDDRNERAGVKFADSDLI 522

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
             PI I  G K   +  + ++   +    +V   +    L
Sbjct: 523 GCPIRITVGKKAV-DGIVEVKIKKTGEMVEVRKEELANTL 561


>gi|313638094|gb|EFS03361.1| prolyl-tRNA synthetase [Listeria seeligeri FSL S4-171]
          Length = 568

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 48/243 (19%), Positives = 92/243 (37%), Gaps = 25/243 (10%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E + H+ L R   +   A   SG+  +        + + + +R +++     E+  P 
Sbjct: 17  DAEVKSHQLLLRAGFIRQTA---SGIYSYLPLATLTLRKIETIIREELEAVGAAELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W+ Y   +  +K      +  R FAL P +     A+    +KSY+ L
Sbjct: 74  LQPAELWQESGRWNDYGPELMRLKD-----RASRDFALGPTHEEVITALLRDEIKSYKRL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+ L +  + +R+E      GL+R R F   DA+ F    +  +E   + +   S    F
Sbjct: 129 PLTLYQIQTKFRDEKRPRF-GLLRGREFIMKDAYSFHATNESLDEVYDLMHQAYS--NIF 185

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
               +  +        +G     +         L  I   +       +   + + Y   
Sbjct: 186 TRCGLEFRSVIADSGSIGGKETQEFV------ALSDIGEDT-------IAYSDASDYAAN 232

Query: 479 FEY 481
            E 
Sbjct: 233 VEM 235



 Score = 77.1 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 59/156 (37%), Gaps = 7/156 (4%)

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW-- 549
           + G I       S+     V   + +  P+++     G       I  ++   N  +W  
Sbjct: 407 EVGHIFKLGTKYSQAMNATVLDENGRAQPIIMGCYGIGVSRILSAIAEQSNDENGLVWDK 466

Query: 550 -LSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPI 605
            +SP    +  +   +   V +A+ +   L+    S+  D R+E    K  +  +  +PI
Sbjct: 467 KISPFDLHLIPVNMKSEEQVAFAETLYQSLQQAGFSVLIDDRSERAGVKFADADLIGLPI 526

Query: 606 IIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            I  G K A+E  + ++   +    +V   + +  L
Sbjct: 527 RITVGKK-AAEGIVEVKIRKTGEMIEVRQDELLNTL 561


>gi|229117305|ref|ZP_04246683.1| Prolyl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|228666205|gb|EEL21669.1| Prolyl-tRNA synthetase [Bacillus cereus Rock1-3]
          Length = 566

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 89/203 (43%), Gaps = 11/203 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R +++     E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K      ++ R FAL   +      +    +KSY++L
Sbjct: 74  MQAAELWQESGRWYSYGSELMRMKD-----RNAREFALGATHEEVITDLVRDEVKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKD 417
           P+ L +  + +R+E      GL+R R F   DA+ F  T+E +     +++    +I+  
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEVYDRLYKAYSNIFAR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDAL 440
            G     V   +       +   
Sbjct: 188 CGLNFRAVIADSGAMGGKDTHEF 210



 Score = 76.7 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 26/159 (16%), Positives = 60/159 (37%), Gaps = 15/159 (9%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVM------IHRAVFGSIERFIGIMIEN 541
           R  + G +  +        NA +++ + +    +M      + R V    E+F     + 
Sbjct: 404 RGIEVGHVFKLGTRYSEAMNATFLDENGKTQALIMGCYGIGVSRTVAAIAEQF----NDE 459

Query: 542 FKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
                P  ++P    V  +   + +  E  + I N L+     +  D R E    K  + 
Sbjct: 460 NGLVWPKAVAPFHVHVIPVNMKSDAQREMGKNIYNSLQEQGYEVLLDDRAERAGVKFADA 519

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
            +  +P+ +  G K A E  + ++   +  +++V + + 
Sbjct: 520 DLFGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEEL 557


>gi|315164831|gb|EFU08848.1| prolyl-tRNA synthetase [Enterococcus faecalis TX1302]
          Length = 572

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 48/254 (18%), Positives = 100/254 (39%), Gaps = 16/254 (6%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++E   H+ L R   +  +A    G+  +     ++ + L + MR +
Sbjct: 4   SKMLIPTLREVPNDAEVLSHQILLRAGYIRQVAA---GIYSYLPLANRVLEKLKTIMREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +  D  E+  P +L   LW++SG +++Y  N++ +K  +D     R + L P +     
Sbjct: 61  FEKIDAVEMLMPALLPAELWKESGRYETYGPNLYRLKDRND-----RDYILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    + SY+ LP+ L +  + YR+E      GL+R R F   D + F   E   ++  
Sbjct: 116 ELIRDEINSYKRLPLNLYQIQTKYRDEKRPR-SGLLRGREFIMKDGYSFHADEASLDQSY 174

Query: 406 KIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
           + +      I++  G E   +           S      +E     +  + ++     + 
Sbjct: 175 RDYEKAYSRIFERCGLEFRAIIGDGGAMGGKDSKEFMAISEIGEDTICYSTESDYAANLE 234

Query: 465 TGVLLGEGAFYGPK 478
                   + Y PK
Sbjct: 235 MAT-----SLYTPK 243



 Score = 64.0 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 23/140 (16%), Positives = 49/140 (35%), Gaps = 9/140 (6%)

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG----NLPLWLSPIQAIVTTITSS-- 563
            V   + +   V++     G   R +  ++E        N P  ++P    V  +     
Sbjct: 425 TVLDENGREKSVIMGCYGIGVS-RLLSAIVEQNADERGINWPTGIAPFDLHVVQMNVKDE 483

Query: 564 -AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
              + +QE+  ++      +  D RNE    K  +  +   PI I  G K   +  + ++
Sbjct: 484 YQTKLSQEVEAMMTEAGYEVLVDDRNERAGVKFADADLIGCPIRITVGKKAV-DGVVEVK 542

Query: 623 RFGSTTTQKVSLLDAIPILT 642
              +    +V   +    L+
Sbjct: 543 IKRTGEMLEVRKEELESTLS 562


>gi|228960035|ref|ZP_04121699.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228799551|gb|EEM46504.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
          Length = 566

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 89/203 (43%), Gaps = 11/203 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R +++     E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K      ++ R FAL   +      +    +KSY++L
Sbjct: 74  MQAAELWQESGRWYSYGSELMRMKD-----RNAREFALGATHEEVITDLVRDEVKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKD 417
           P+ L +  + +R+E      GL+R R F   DA+ F  T+E +     +++    +I+  
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEVYDRLYKAYSNIFAR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDAL 440
            G     V   +       +   
Sbjct: 188 CGLNFRAVIADSGAMGGKDTHEF 210



 Score = 76.0 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/159 (16%), Positives = 60/159 (37%), Gaps = 15/159 (9%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVM------IHRAVFGSIERFIGIMIEN 541
           R  + G +  +        NA +++ + +    +M      + R V    E+F     + 
Sbjct: 404 RGIEVGHVFKLGTRYSEAMNATFLDENGKAQLLIMGCYGIGVSRTVAAIAEQF----NDE 459

Query: 542 FKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
                P  ++P    V  +   + +  E  + I N L+     +  D R E    K  + 
Sbjct: 460 NGLVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERAGVKFADA 519

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
            +  +P+ +  G K A E  + ++   +  +++V + + 
Sbjct: 520 DLFGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEEL 557


>gi|229129095|ref|ZP_04258068.1| Prolyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|229146390|ref|ZP_04274761.1| Prolyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|296504314|ref|YP_003666014.1| prolyl-tRNA synthetase [Bacillus thuringiensis BMB171]
 gi|228637023|gb|EEK93482.1| Prolyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|228654332|gb|EEL10197.1| Prolyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|296325366|gb|ADH08294.1| prolyl-tRNA synthetase [Bacillus thuringiensis BMB171]
          Length = 566

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 89/203 (43%), Gaps = 11/203 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R +++     E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K      ++ R FAL   +      +    +KSY++L
Sbjct: 74  MQAAELWQESGRWYSYGSELMRMKD-----RNAREFALGATHEEVITDLVRDEVKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKD 417
           P+ L +  + +R+E      GL+R R F   DA+ F  T+E +     +++    +I+  
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEVYDRLYKAYSNIFAR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDAL 440
            G     V   +       +   
Sbjct: 188 CGLNFRAVIADSGAMGGKDTHEF 210



 Score = 79.1 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 61/157 (38%), Gaps = 11/157 (7%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G +  +        NA +++ +  K  P+++     G   R +  + E F     
Sbjct: 404 RGIEVGHVFKLGTRYSEAMNATFLDENG-KTQPLIMGCYGIGVS-RTVAAIAEQFNDENG 461

Query: 546 --LPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              P  ++P    V  +   + +  E  + I N L+     +  D R E    K  +  +
Sbjct: 462 LVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERAGVKFADADL 521

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
             +P+ +  G K A E  + ++   +  +++V + + 
Sbjct: 522 FGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEEL 557


>gi|185178982|ref|ZP_02964737.1| prolyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str. ATCC
           27817]
 gi|188518276|ref|ZP_03003799.1| prolyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str. ATCC
           33695]
 gi|188524364|ref|ZP_03004396.1| prolyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str. ATCC
           33696]
 gi|195867791|ref|ZP_03079791.1| prolyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str. ATCC
           33175]
 gi|198273755|ref|ZP_03206289.1| prolyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str. ATCC
           27816]
 gi|209554280|ref|YP_002284879.1| prolyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str. ATCC
           33699]
 gi|225551615|ref|ZP_03772561.1| proline--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
 gi|259511630|sp|B5ZBT9|SYP_UREU1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|184209266|gb|EDU06309.1| prolyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str. ATCC
           27817]
 gi|188998019|gb|EDU67116.1| prolyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str. ATCC
           33695]
 gi|195659957|gb|EDX53337.1| prolyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str. ATCC
           33696]
 gi|195660488|gb|EDX53745.1| prolyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str. ATCC
           33175]
 gi|198249510|gb|EDY74292.1| prolyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str. ATCC
           27816]
 gi|209541781|gb|ACI60010.1| prolyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str. ATCC
           33699]
 gi|225379430|gb|EEH01795.1| proline--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
          Length = 472

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 68/392 (17%), Positives = 143/392 (36%), Gaps = 52/392 (13%)

Query: 261 DGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD-QHLWQQSGHWDSYRANM 318
           D  G++ +    W I++ + + +  + K      +  P ++      ++  H + +   +
Sbjct: 33  DIKGMMVFQPNAWAIWEAIKNQIDLEFKKHGVRNLAMPTLIPLSEFQKEKDHIEGFAPEL 92

Query: 319 FAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLH 378
           F V    D   D   +A++P +       F + + SY +LP++  ++ SV R E   +  
Sbjct: 93  FMVNQIGDKKLDN-PYAIRPTSEILFCNYFKNIVNSYNDLPIKNNQWCSVMRAEK--TTR 149

Query: 379 GLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD 438
             +R   F   + H     E   +E  K    I+ +Y DF                    
Sbjct: 150 PFLRNAEFHWQELHAIFASEHEADEFAKT---ILDVYTDF-------------------- 186

Query: 439 ALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
                       V + +       + T      GA      E +++D  G+  Q  T   
Sbjct: 187 ------------VQNYLCIPVIKGLKTPWERFAGAQKTYTIEAMMQD--GQALQSATSHY 232

Query: 499 -DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI---- 553
                   ++  +    ++  +   +H+   G   R IG +I     +  L L P     
Sbjct: 233 LGQFFAKAYDIKFQGQDNQMHY---VHQMSAGLSTRIIGALIMVHADDQGLILPPDIAFN 289

Query: 554 QAIVTTITSSAVEYAQEIANLLKSH--HLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
           Q  + +I ++       I+  +++      +  D  ++ + YK+ +  I+  PI I+ G 
Sbjct: 290 QIAILSIFANKNPQLLTISEQIRNELSDYRLFEDHSDKGVGYKLAQQEIEGTPICILVGV 349

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           KE + + + + R  +     V+L+D    + K
Sbjct: 350 KELANQQVVLVRRDTHEKINVNLIDLKSTIKK 381


>gi|317136752|ref|XP_001727256.2| prolyl-tRNA synthetase YHR020W [Aspergillus oryzae RIB40]
          Length = 603

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 79/413 (19%), Positives = 155/413 (37%), Gaps = 67/413 (16%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRAN 317
            D SG        + I++ +  +   +IK    +  + P  + + +  ++  H + + A 
Sbjct: 116 YDVSGCFILKPASYFIWEEIQDWFNARIKKIGVKNCSFPLFVSEDVLNREKDHIEGFAAE 175

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           +  V  A  +  + +  A++P +       ++  ++S+R+LP++L ++ SV R E     
Sbjct: 176 VAWVTHAGSSPLEKK-IAIRPTSETVMYPYYSKWIRSHRDLPLKLNQWNSVVRWEFKNP- 233

Query: 378 HGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
              +R R F   + H    TK+   +E + I +L   IY++     ++    T  EK  G
Sbjct: 234 QPFLRTREFLWQEGHTAHLTKDGAHDEVMHILDLYAQIYEELLAVPVVKGQKTEKEKFAG 293

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
                                                 Y    E  +  A GR  Q GT 
Sbjct: 294 G------------------------------------LYTTTVEGYIP-ATGRGIQGGTS 316

Query: 497 Q-VDFNLPSRFNAFYVNSH---SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
             +  N    FN    +      EK  P+ + +  +G   R +G+M+     N  L L P
Sbjct: 317 HGLGQNFSKMFNITVEDPSTKPDEKKPPLHVWQNSWGLSTRTLGVMVMIHSDNRGLVLPP 376

Query: 553 ----IQAIVTTI------TSSAVE--YAQE--IANLLKSHHLSIETDFR-NETINYKIRE 597
                Q ++  +      +    E  YA+   + N+L    +   +D R   +  +K  +
Sbjct: 377 RVADTQTVIVPVGITAKTSDEEREKLYAEIDGLINILTGAGVRAISDKREGYSPGWKFND 436

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRF------GSTTTQKVSLLDAIPILTKE 644
             ++ +P+ I  G  E+  + +   R       G ++ Q   L  A+P L ++
Sbjct: 437 WELRGVPLRIEFGPGESVGQFVTAARRDIPGKDGKSSIQISELSTAVPALLEQ 489


>gi|188024082|ref|ZP_02996824.1| prolyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str. ATCC
           27819]
 gi|188019126|gb|EDU57166.1| prolyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str. ATCC
           27819]
          Length = 472

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 68/392 (17%), Positives = 143/392 (36%), Gaps = 52/392 (13%)

Query: 261 DGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD-QHLWQQSGHWDSYRANM 318
           D  G++ +    W I++ + + +  + K      +  P ++      ++  H + +   +
Sbjct: 33  DIKGMMVFQPNAWAIWEAIKNQIDLEFKKHGVRNLAMPTLIPLSEFQKEKDHIEGFAPEL 92

Query: 319 FAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLH 378
           F V    D   D   +A++P +       F + + SY +LP++  ++ SV R E   +  
Sbjct: 93  FMVNQIGDKKLDN-PYAIRPTSEILFCNYFKNIVNSYNDLPIKNNQWCSVMRAEK--TTR 149

Query: 379 GLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD 438
             +R   F   + H     E   +E  K    I+ +Y DF                    
Sbjct: 150 PFLRNAEFHWQELHAIFASEHEADEFAKT---ILDVYTDF-------------------- 186

Query: 439 ALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
                       V + +       + T      GA      E +++D  G+  Q  T   
Sbjct: 187 ------------VQNYLCIPVIKGLKTPWERFAGAQKTYTIEAMMQD--GQALQSATSHY 232

Query: 499 -DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI---- 553
                   ++  +    ++  +   +H+   G   R IG +I     +  L L P     
Sbjct: 233 LGQFFAKAYDIKFQGQDNQMHY---VHQMSAGLSTRIIGALIMVHADDQGLILPPDIAFN 289

Query: 554 QAIVTTITSSAVEYAQEIANLLKSH--HLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
           Q  + +I ++       I+  +++      +  D  ++ + YK+ +  I+  PI I+ G 
Sbjct: 290 QIAILSIFANKNPQLLTISEQIRNELSDYRLFEDHSDKGVGYKLAQQEIEGTPICILVGV 349

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           KE + + + + R  +     V+L+D    + K
Sbjct: 350 KELANQQVVLVRRDTHEKINVNLIDLKSTIKK 381


>gi|224823461|ref|ZP_03696570.1| prolyl-tRNA synthetase [Lutiella nitroferrum 2002]
 gi|224603916|gb|EEG10090.1| prolyl-tRNA synthetase [Lutiella nitroferrum 2002]
          Length = 571

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 59/310 (19%), Positives = 105/310 (33%), Gaps = 30/310 (9%)

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLF--HIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
              +Q+     +    D   +++++ L    I +  +G+  W   G K  + + + +R +
Sbjct: 1   MRASQFFISTLKEAPADADIVSQKLMLRAGFIRKAAAGIYSWMPMGLKSLRKVEAIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P V    LWQ++G WD+    M   K      +  R F ++P +     
Sbjct: 61  MNRAGAIEVIMPIVQPAGLWQETGRWDTMGEEMLRFKD-----RHERDFVIQPTSEEVVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT-KEQMFNEC 404
            +    LKSYR LP    +  + +R+E      G+MR R FT  DA+ F    +      
Sbjct: 116 DLIRGDLKSYRALPKNFYQIQTKFRDERRPRF-GVMRGREFTMKDAYSFDRSADAAGVSY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
             ++     I+   G     V   T       S      A      ++    +     I 
Sbjct: 175 DNMYAAYCKIFDRIGLTYRAVAADTGAIGGDRSHEFQVIAATGEDAIIYCPDSDYAANIE 234

Query: 465 T-------GVLLGEGA----FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS 513
                   G     GA     Y PK          +        +  ++     A  V+ 
Sbjct: 235 LAEAVAPAGERPAPGAAMEKVYTPKV---------KTIADLVDFLKADIKQTVKAIVVDG 285

Query: 514 HSEKCHPVMI 523
             E   PV++
Sbjct: 286 DGEDGQPVLL 295



 Score = 79.1 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 25/166 (15%), Positives = 61/166 (36%), Gaps = 13/166 (7%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NF 542
           AI R  + G +  +        NA +++   +   P       +G  + R +G  IE NF
Sbjct: 403 AIERGIEVGHVFYLGTKYSQAMNATFLDEDGK---PKFFEMGCYGIGVTRILGAAIEQNF 459

Query: 543 KGNLPLWL---SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
                +W    +P   ++  +    ++     A ++   L ++ + +  D R E      
Sbjct: 460 DAKGIIWPDAIAPFTVVLCPVGYDRSAEVKAAADQLYAELVANGVDVILDDRGERPGAMF 519

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            +  +  +P  +  GD+   E  +  +    +    +++   +  +
Sbjct: 520 ADWELIGVPHRVTIGDRGLKEGKVEYQHRRDSEATGMAVDAILEHV 565


>gi|229098288|ref|ZP_04229235.1| Prolyl-tRNA synthetase [Bacillus cereus Rock3-29]
 gi|228685186|gb|EEL39117.1| Prolyl-tRNA synthetase [Bacillus cereus Rock3-29]
          Length = 566

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 89/203 (43%), Gaps = 11/203 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R +++     E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K      ++ R FAL   +      +    +KSY++L
Sbjct: 74  MQAAELWQESGRWYSYGSELMRMKD-----RNAREFALGATHEEVITDLVRDEVKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKD 417
           P+ L +  + +R+E      GL+R R F   DA+ F  T+E +     +++    +I+  
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEVYDRLYKAYSNIFAR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDAL 440
            G     V   +       +   
Sbjct: 188 CGLNFRAVIADSGAMGGKDTHEF 210



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 26/159 (16%), Positives = 60/159 (37%), Gaps = 15/159 (9%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVM------IHRAVFGSIERFIGIMIEN 541
           R  + G +  +        NA +++ + +    +M      + R V    E+F     + 
Sbjct: 404 RGIEVGHVFKLGTRYSEAMNATFLDENGKTQALIMGCYGIGVSRTVAAIAEQF----NDE 459

Query: 542 FKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
                P  ++P    V  +   + +  E  + I N L+     +  D R E    K  + 
Sbjct: 460 NGLVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERAGVKFADA 519

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
            +  +P+ +  G K A E  + ++   +  +++V + + 
Sbjct: 520 DLFGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEEL 557


>gi|221194513|ref|ZP_03567570.1| prolyl-tRNA synthetase [Atopobium rimae ATCC 49626]
 gi|221185417|gb|EEE17807.1| prolyl-tRNA synthetase [Atopobium rimae ATCC 49626]
          Length = 571

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 44/163 (26%), Positives = 72/163 (44%), Gaps = 10/163 (6%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
            HR L R   +   A    G+  +    W+  + +   +R ++     +EI  P +    
Sbjct: 26  SHRLLLRAGMIRKTAA---GLYSYLPLAWRSLRKIEEIIRDEMDGIGAQEILVPILTPAE 82

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SG WD Y   +  +       +  R FAL P +      +  + LKSY++LPV L 
Sbjct: 83  LWEESGRWDVYGPELMRLHD-----RHERKFALGPTHEETFTDLVRNELKSYKQLPVTLY 137

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           +    +R+E      GLMR R F   DA+ F + ++   EC  
Sbjct: 138 QIQDKFRDEMRPRF-GLMRGREFIMKDAYSFSSTQESLQECYD 179



 Score = 90.2 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 22/158 (13%), Positives = 54/158 (34%), Gaps = 9/158 (5%)

Query: 497 QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSP 552
           Q+         A +      +  P ++     G   R +  ++E          P+ ++P
Sbjct: 412 QLGTKYSEALGATFTAEDGTEQ-PFLMGCYGIGVS-RLLAAVVEQHNDEHGIIWPVCVAP 469

Query: 553 IQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIIC 609
            +  +  ++    +    A+++A+      L    D R+E    K  +  +  +P  +I 
Sbjct: 470 YEVEIVPLSVGDDTVWPVAKQLADSFVEAGLETVVDDRDERPGVKFADADLIGLPWQVIV 529

Query: 610 GDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLP 647
           G +  +     ++   +     V+L +    L     P
Sbjct: 530 GKRGVANGVAEVKNRETGERVDVALDEVAAWLVSRIAP 567


>gi|126306083|ref|XP_001381501.1| PREDICTED: similar to Prolyl-tRNA synthetase
           (mitochondrial)(putative) [Monodelphis domestica]
          Length = 475

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 64/373 (17%), Positives = 136/373 (36%), Gaps = 31/373 (8%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I   G G   +     +  + L+  + ++++    ++++ P +    LW+ +  W+    
Sbjct: 80  IHPAGPGCYHYLPYTVRAMEKLVKVIDQEMQAIGGQKLDMPTLSSAELWRVTDRWNLMGK 139

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHV-AVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            +F ++      +  + + L P +       + +    SY++LP  L +    +R+EP  
Sbjct: 140 ELFRLQD-----RHNKDYCLGPTHEEVITSLMASQKTLSYKQLPYLLYQITRKFRDEPRP 194

Query: 376 SLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              GL+R R F   D + F C+ E        +      ++   G + + V+ +      
Sbjct: 195 RF-GLLRGREFYMKDMYTFDCSSEAAHQTYDLVCEAYGRVFNRLGLQFVRVQAAVGSIGG 253

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
             S        NI + VL    N +       +   +     P  +  L +  G +    
Sbjct: 254 TMSHEF-QLPLNIGEDVLAVCSNCNFAANVETLDPRDPT--CPVCQGKLTETKGVEV-GH 309

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG-SIERFIGIMIENFKG----NLPLW 549
           T  +     S FNA ++N+  +   P ++    +G  + R +   IE          P  
Sbjct: 310 TFYLGTKYSSVFNAEFINAQGK---PSLLEMGCYGLGVTRILAAAIEMLSMEECIRWPSL 366

Query: 550 LSPIQAIVTTITSSAVE---------YAQEIANLLKSHHLSIETDFR-NETINYKIREHS 599
           L+P Q  +      + E            +I   L      +  D R + TI  ++++ +
Sbjct: 367 LAPYQVCLIPPKKGSKEEMGIELMGTLYDDITEALPQLKGEVLLDDRIHLTIGNRLKDAN 426

Query: 600 IKKIPIIIICGDK 612
               P ++I G +
Sbjct: 427 KLGYPFVVIAGKR 439


>gi|229104381|ref|ZP_04235050.1| Prolyl-tRNA synthetase [Bacillus cereus Rock3-28]
 gi|228679079|gb|EEL33287.1| Prolyl-tRNA synthetase [Bacillus cereus Rock3-28]
          Length = 566

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 89/203 (43%), Gaps = 11/203 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R +++     E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K      ++ R FAL   +      +    +KSY++L
Sbjct: 74  MQAAELWQESGRWYSYGSELMRMKD-----RNAREFALGATHEEVITDLVRDEVKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKD 417
           P+ L +  + +R+E      GL+R R F   DA+ F  T+E +     +++    +I+  
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEVYDRLYKAYSNIFAR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDAL 440
            G     V   +       +   
Sbjct: 188 CGLNFRAVIADSGAMGGKDTHEF 210



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 26/159 (16%), Positives = 60/159 (37%), Gaps = 15/159 (9%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVM------IHRAVFGSIERFIGIMIEN 541
           R  + G +  +        NA +++ + +    +M      + R V    E+F     + 
Sbjct: 404 RGIEVGHVFKLGTRYSEAMNATFLDENGKTQALIMGCYGIGVSRTVAAIAEQF----NDE 459

Query: 542 FKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
                P  ++P    V  +   + +  E  + I N L+     +  D R E    K  + 
Sbjct: 460 NGLVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERAGVKFADA 519

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
            +  +P+ +  G K A E  + ++   +  +++V + + 
Sbjct: 520 DLFGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEEL 557


>gi|171920903|ref|ZP_02932054.1| prolyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str. ATCC
           33698]
 gi|171903119|gb|EDT49408.1| prolyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str. ATCC
           33698]
          Length = 472

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 68/392 (17%), Positives = 143/392 (36%), Gaps = 52/392 (13%)

Query: 261 DGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD-QHLWQQSGHWDSYRANM 318
           D  G++ +    W I++ + + +  + K      +  P ++      ++  H + +   +
Sbjct: 33  DIKGMMVFQPNAWAIWEAIKNQIDLEFKKHGVRNLAMPTLIPLSEFQKEKDHIEGFAPEL 92

Query: 319 FAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLH 378
           F V    D   D   +A++P +       F + + SY +LP++  ++ SV R E   +  
Sbjct: 93  FMVNQIGDKKLDN-PYAIRPTSEILFCNYFKNIVNSYNDLPIKNNQWCSVMRAEK--TTR 149

Query: 379 GLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD 438
             +R   F   + H     E   +E  K    I+ +Y DF                    
Sbjct: 150 PFLRNAEFHWQELHAIFASEHEADEFAKT---ILDVYTDF-------------------- 186

Query: 439 ALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
                       V + +       + T      GA      E +++D  G+  Q  T   
Sbjct: 187 ------------VQNYLCIPVIKGLKTPWERFAGAQKTYTIEAMMQD--GQALQSATSHY 232

Query: 499 -DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI---- 553
                   ++  +    ++  +   +H+   G   R IG +I     +  L L P     
Sbjct: 233 LGQFFAKAYDIKFQGQDNQMHY---VHQMSAGLSTRIIGALIMVHADDQGLILPPDIAFN 289

Query: 554 QAIVTTITSSAVEYAQEIANLLKSH--HLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
           Q  + +I ++       I+  +++      +  D  ++ + YK+ +  I+  PI I+ G 
Sbjct: 290 QIAILSIFANKNPQLLTISEQIRNELSDYRLFEDHSDKGVGYKLAQQEIEGTPICILVGV 349

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           KE + + + + R  +     V+L+D    + K
Sbjct: 350 KELANQQVVLVRRDTHEKINVNLIDLKSTIKK 381


>gi|302346053|ref|YP_003814406.1| phosphoribulokinase/uridine kinase family protein [Prevotella
           melaninogenica ATCC 25845]
 gi|302149920|gb|ADK96182.1| phosphoribulokinase/uridine kinase family protein [Prevotella
           melaninogenica ATCC 25845]
          Length = 555

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 45/242 (18%), Positives = 96/242 (39%), Gaps = 3/242 (1%)

Query: 1   MPSDIKLTFPDGSI-KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-S 58
           M   + +   +    +  P+ +T SD+ + I+  +    V+  +N KV  L   V     
Sbjct: 3   MRQVLHIRCKNNKKTQEVPIGSTLSDIYKEINLQMPYGPVSAKVNNKVEGLHYRVYHNKD 62

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           +E +    P  +     S   ++ +AV  ++P   V I   + +G+Y +       ++++
Sbjct: 63  VEFLNLLTPSGIRTYTRSLFLVLCKAVHDLYPTSSVVIDIPVSNGYYCNLQLGHEITTED 122

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           + +I  +MQEII    P  +   + E+A ++F    +  K ++L+S         Y   +
Sbjct: 123 VDRIRTRMQEIIDAKMPIQRYETTTEEAVKMFTELGDIQKAKLLKS-SGSLYCVYYVLDD 181

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D   G  + +T Q+  F       G   R  S +           +   E+ +  +  
Sbjct: 182 YKDYYYGSMLTNTSQLHLFGLEPYFDGVLLRIPSTQDPSKLGELIRQDKMFEVFKEHHRW 241

Query: 239 EE 240
           + 
Sbjct: 242 QS 243


>gi|213964749|ref|ZP_03392949.1| prolyl-tRNA synthetase [Corynebacterium amycolatum SK46]
 gi|213952942|gb|EEB64324.1| prolyl-tRNA synthetase [Corynebacterium amycolatum SK46]
          Length = 590

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 41/222 (18%), Positives = 84/222 (37%), Gaps = 11/222 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  L        ++E   H+ L R   +   A    GV  W   G K+ + +   +R +
Sbjct: 6   SQLFLRTLREDPADAEVPSHKLLVRAGYIRRTA---PGVYSWLPLGLKVLRNVEKVVREE 62

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++    +E+  P +L +  ++ +  W  Y   +F +K      +    + L P +     
Sbjct: 63  MEGIGAQELAFPALLPREPYEATNRWTEYGPELFRLKD-----RKGADYLLGPTHEEMFA 117

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
                   SY++ P  L +  + YR+E      G++R R F   D++ F   ++      
Sbjct: 118 LAVKDLFSSYKDFPTTLFQIQTKYRDEARPR-AGILRGREFVMKDSYSFDMDDEGLENSY 176

Query: 406 KIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
           + H      I+   G +  +   ++       S+     +EN
Sbjct: 177 QQHRGAYQRIFDRLGIKYEICHATSGAMGGSASEEFLAVSEN 218



 Score = 64.0 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 22/163 (13%), Positives = 60/163 (36%), Gaps = 11/163 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN----FK 543
           R  + G I Q+     + F    ++ + ++  P M    +   + R + ++ E       
Sbjct: 426 RGIEIGHIFQLGRKYTNAFEIDILDVNGKRARPTMGSYGI--GVSRLVAVLAEQQLDEKG 483

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANL--LKSHHLSIETDFRNE-TINYKIREHSI 600
              P+  +P +  +     +A            L    + +  D R + +   K ++  +
Sbjct: 484 LKWPVAAAPYKVHIAVAGKNAEAAEAAEQLAEDLSQQGIEVLFDDRPKVSPGVKFKDAEL 543

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             +P ++I G +  ++  + +R   +  T +V+       + +
Sbjct: 544 LGMPFVVIFG-RGYADGKVELRNRLTNETDEVAADGIAAHVAE 585


>gi|326318382|ref|YP_004236054.1| prolyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC 19860]
 gi|323375218|gb|ADX47487.1| prolyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC 19860]
          Length = 581

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 38/199 (19%), Positives = 82/199 (41%), Gaps = 11/199 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       ++E   H+ + R   +  +   G+G+  +   G ++ + + + +R 
Sbjct: 3   ASQFFVSTLKEAPADAEVVSHKLMTRAGLIKKL---GAGIYNYMPMGLRVIRKVEAIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V     WQ++G +D     +  ++      +  R F ++P +    
Sbjct: 60  EMNRAGAVEVTMPVVQPAEFWQETGRFDKMGPELLRIRD-----RHGRDFVVQPTSEEVV 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    L+SY++LP  L +  + +R+E      GLMR R F   DA+ F   +      
Sbjct: 115 TDIARQELRSYKQLPKNLYQIQTKFRDERRPRF-GLMRGREFIMKDAYSFDRDQAAAKAS 173

Query: 405 LKIH-NLIISIYKDFGFEK 422
            ++       I+  FG   
Sbjct: 174 YQVMAQAYRRIFDRFGLTY 192



 Score = 79.4 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 52/167 (31%), Gaps = 11/167 (6%)

Query: 486 AIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           AI R  + G +       SR  A       E   P       +G  I R     IE    
Sbjct: 413 AIERGIEVGHVFYLGTKYSR--AMNATFLGEDGKPAFFEMGCYGIGITRLPAAAIEQNHD 470

Query: 545 N----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                 P  ++P   +V  I    +      A+++   L +  + +  D R E       
Sbjct: 471 ERGIIWPDAIAPFTVVVCPIGMDRSEEVRAAAEKLHADLLAAGVDVILDDRGERPGAMFA 530

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  +  +P  ++  D+   E  +  +        KV+  D    +  
Sbjct: 531 DWELIGVPHRVVLSDRGLKEGQVEYQHRRDAAATKVASADIFAFIKD 577


>gi|256396855|ref|YP_003118419.1| prolyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
 gi|256363081|gb|ACU76578.1| prolyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
          Length = 582

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 41/207 (19%), Positives = 84/207 (40%), Gaps = 11/207 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +  +A    G+  W   G ++ + +   +R ++     +E+  P 
Sbjct: 19  DAEVPSHKLLVRGGYVRRVA---PGIYSWLPLGKQVLENVTRVVREEMDRMGGQEVQFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++ +G W  Y  N+F ++      +    + L P +      +    + SY++L
Sbjct: 76  LLPREYYEATGRWTEYGDNLFRLQD-----RRGNDYLLGPTHEEMFTDMVKSEVSSYKDL 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKD 417
           PV L +  + YR+E      G++R R F   D++ F   +         H    I I+  
Sbjct: 131 PVTLYQIQTKYRDEARPR-AGILRGREFLMKDSYSFDLDDDGLKHSYAEHRDTYIRIFDR 189

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDA 444
            G +  +V   +       S+     A
Sbjct: 190 LGIKYKIVSAVSGAMGGSASEEFLATA 216



 Score = 80.2 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 27/166 (16%), Positives = 62/166 (37%), Gaps = 14/166 (8%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFK 543
           +I R  + G I Q+            +    +   PV +    +G  + R + ++ E   
Sbjct: 415 SIDRGIEIGHIFQLGRKYADAAKLDVLGKDGK---PVRVTMGSYGVGVSRAVAVLAEQLH 471

Query: 544 GNLPL-WL---SPIQAIVTTITSSAVEY--AQEIANLLKSHHLSIETDFR--NETINYKI 595
             L L W    +P    +         Y  A   A  L +  + +  D R  + +   K 
Sbjct: 472 DELGLVWPREVAPADVHIVAAGKDPAIYETANRYAEELGARGVRVLYDDRVGSVSPGVKF 531

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           ++  +  +P I++ G +  ++  + +R   +    +V++ D +  +
Sbjct: 532 KDAELIGVPTIVVVG-RNLADGVVEVRDRQTGEKAEVAVPDLVEHV 576


>gi|326771743|ref|ZP_08231028.1| proline--tRNA ligase [Actinomyces viscosus C505]
 gi|326637876|gb|EGE38777.1| proline--tRNA ligase [Actinomyces viscosus C505]
          Length = 610

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 40/212 (18%), Positives = 79/212 (37%), Gaps = 11/212 (5%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
           +        ++E   HR L R   +        GV  W   G +  + +   +R+++   
Sbjct: 10  IRTLREDPADAEVASHRLLVRACYVR---RAAPGVYTWLPLGLRTLRKIEDIVRQEMDAM 66

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
             +E++ P +L    +Q +G WD Y   +F ++   D       + L P +         
Sbjct: 67  GGQEVHFPALLPAEPYQATGRWDDYGPTLFKLRDRKDG-----DYLLAPTHEEMFTLAVK 121

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
               SY++LP  + +  + YR+E      G++R R F   D++ F   +       + H 
Sbjct: 122 DLYSSYKDLPAVVYQIQTKYRDEARPR-AGIIRGREFVMKDSYSFDIDDAGLAAAYQAHR 180

Query: 410 -LIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
                I+   G + ++V           S+  
Sbjct: 181 DTYERIFTRLGLDYVIVNAMAGAMGGSHSEEF 212



 Score = 84.8 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 57/161 (35%), Gaps = 8/161 (4%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE----NFKG 544
           R  + G I       S+     V   + K   V +     G   R +  + E    +   
Sbjct: 439 RGIEIGHIFELGRKYSQALGLTVLDENGKARVVTMGSYGIGVS-RVMAALAEANHDDKGL 497

Query: 545 NLPLWLSPIQAIVTTITSSAV--EYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIK 601
             P  ++P    V          + A++IA+ L +  + +  D R + +   K  +  + 
Sbjct: 498 TWPAQIAPYHVQVLATGKDQAVFDVAEQIASSLDADGVEVLYDDRRKVSAGVKFADAELL 557

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +P  ++ G   A E ++ IR   +   + V    A   L+
Sbjct: 558 GLPYTLVVGRDLAKEGTVEIRDRRTGERRSVPADAAAAELS 598


>gi|289434600|ref|YP_003464472.1| hypothetical protein lse_1235 [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289170844|emb|CBH27386.1| proS [Listeria seeligeri serovar 1/2b str. SLCC3954]
          Length = 568

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 45/184 (24%), Positives = 82/184 (44%), Gaps = 11/184 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E + H+ L R   +   A   SG+  +        + + + +R +++     E+  P 
Sbjct: 17  DAEVKSHQLLLRAGFIRQTA---SGIYSYLPLATLTLRKIETIIREELEAVGAAELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W+ Y   +  +K      +  R FAL P +     A+    +KSY+ L
Sbjct: 74  LQPAELWQESGRWNDYGPELMRLKD-----RASRDFALGPTHEEVITALLRDEIKSYKRL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKD 417
           P+ L +  + +R+E      GL+R R F   DA+ F    +  +E    +H    +I+  
Sbjct: 129 PLTLYQIQTKFRDEKRPRF-GLLRGREFIMKDAYSFHATNESLDEVYDLMHQAYSNIFTR 187

Query: 418 FGFE 421
            G E
Sbjct: 188 CGLE 191



 Score = 77.5 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 59/156 (37%), Gaps = 7/156 (4%)

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW-- 549
           + G I       S+     V   + +  P+++     G       I  ++   N  +W  
Sbjct: 407 EVGHIFKLGTKYSQAMNATVLDENGRAQPIIMGCYGIGVSRILSAIAEQSNDENGLVWDK 466

Query: 550 -LSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPI 605
            +SP    +  +   +   V +A+ +   L+    S+  D R+E    K  +  +  +PI
Sbjct: 467 KISPFDLHLIPVNMKSEEQVAFAETLYQSLQQAGFSVLIDDRSERAGVKFADADLIGLPI 526

Query: 606 IIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            I  G K A+E  + ++   +    +V   + +  L
Sbjct: 527 RITVGKK-AAEGIVEVKIRKTGEMIEVRQDELLNTL 561


>gi|229162755|ref|ZP_04290712.1| Prolyl-tRNA synthetase [Bacillus cereus R309803]
 gi|228620637|gb|EEK77506.1| Prolyl-tRNA synthetase [Bacillus cereus R309803]
          Length = 566

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 89/203 (43%), Gaps = 11/203 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R +++     E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K      ++ R FAL   +      +    +KSY++L
Sbjct: 74  MQAAELWQESGRWYSYGSELMRMKD-----RNAREFALGATHEEVITDLVRDEVKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKD 417
           P+ L +  + +R+E      GL+R R F   DA+ F  T+E +     +++    +I+  
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEVYDRLYKAYSNIFAR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDAL 440
            G     V   +       +   
Sbjct: 188 CGLNFRAVIADSGAMGGKDTHEF 210



 Score = 78.3 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 26/157 (16%), Positives = 61/157 (38%), Gaps = 11/157 (7%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G +  +        NA +++ +  K  P+++     G   R +  + E F     
Sbjct: 404 RGIEVGHVFKLGTRYSEAMNATFLDENG-KTQPLIMGCYGIGVS-RTVAAIAEQFNDESG 461

Query: 546 --LPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              P  ++P    V  +   + +  E  + I + L+     +  D R E    K  +  +
Sbjct: 462 LVWPKAVAPFHVHVIPVNMKSDAQREMGESIYSSLQEQGYEVLLDDRAERAGVKFADADL 521

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
             +P+ +  G K A E  + ++   +  +++V + + 
Sbjct: 522 FGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEEL 557


>gi|115638543|ref|XP_783415.2| PREDICTED: similar to Prolyl-tRNA synthetase
           (mitochondrial)(putative) isoform 1 [Strongylocentrotus
           purpuratus]
 gi|115931464|ref|XP_001186319.1| PREDICTED: similar to Prolyl-tRNA synthetase
           (mitochondrial)(putative) [Strongylocentrotus
           purpuratus]
          Length = 569

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 62/424 (14%), Positives = 141/424 (33%), Gaps = 32/424 (7%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
            + + + + HR +   M+   I +   G         +  + LI  +  +++    ++I 
Sbjct: 153 KVADVKCKSHRLM---MEAGLIRQASPGTFHLLPLAMRALEKLIKVIDTEMQKVGGQKIA 209

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN-HGLKS 354
            P +    LW+ SG +  Y   +  ++   +       + L P +      +       S
Sbjct: 210 MPGMTPSSLWKTSGRYSDYGPELITLQDRHNV-----DYCLGPTHEEAVTDIVAGEKTLS 264

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT-KEQMFNECLKIHNLIIS 413
           ++ LP++L +  + +R+E     +GL+R R F   D + F +  E        +      
Sbjct: 265 HKRLPIKLYQITNKFRDEMRPR-YGLLRGREFLMKDLYTFDSNLEGAEETYRSVCEAYQR 323

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           I+       +    +T       S      +E     V    +        T   +    
Sbjct: 324 IFSILDLPIVQAVGATGAIGGSFSHEFHLLSEIGEDHVYHCSRCGYAVNQETVEGVPSCP 383

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG-SIE 532
            +    +  +    G +       +       F A + +   +   P +     +G  + 
Sbjct: 384 DHPSTPDCNMSLRQGIEV-GHAFLLGTKYSKTFKADFYDKDGK---PRLAEMGCYGLGVT 439

Query: 533 RFIGIMIE----NFKGNLPLWLSPIQAIVTTITSSAVEY-AQEIANLLKSHHL------- 580
           R +   IE      +   P  ++P Q  + +      E  A  +A  L            
Sbjct: 440 RILAAAIEVLSSEKEIRWPQIIAPYQVCIVSPKEGGAERSAIHLAEWLYQDVCLHVPHLA 499

Query: 581 -SIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASER-SIGIRRFGSTTTQKVSLLDA 637
             +  D R   TI  ++++ +    P+I++ G +         +    S +T+ +S +D 
Sbjct: 500 ADLLLDDRGHMTIGRRVKDAAHVGYPLIVVVGKRALEADPKFEVINTASGSTEYLSKVDL 559

Query: 638 IPIL 641
           +  +
Sbjct: 560 LQRM 563


>gi|30021908|ref|NP_833539.1| prolyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|81433856|sp|Q819Y4|SYP1_BACCR RecName: Full=Prolyl-tRNA synthetase 1; AltName: Full=Proline--tRNA
           ligase 1; Short=ProRS 1
 gi|29897464|gb|AAP10740.1| Prolyl-tRNA synthetase [Bacillus cereus ATCC 14579]
          Length = 566

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 89/203 (43%), Gaps = 11/203 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R +++     E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K      ++ R FAL   +      +    +KSY++L
Sbjct: 74  MQAAELWQESGRWYSYGSELMRMKD-----RNAREFALGATHEEVITDLVRDEVKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKD 417
           P+ L +  + +R+E      GL+R R F   DA+ F  T+E +     +++    +I+  
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEVYDRLYKAYSNIFAR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDAL 440
            G     V   +       +   
Sbjct: 188 CGLNFRAVIADSGAMGGKDTHEF 210



 Score = 79.1 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 61/157 (38%), Gaps = 11/157 (7%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G +  +        NA +++ +  K  P+++     G   R +  + E F     
Sbjct: 404 RGIEVGHVFKLGTRYSEAMNATFLDENG-KTQPLIMGCYGIGVS-RTVAAIAEQFNDENG 461

Query: 546 --LPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              P  ++P    V  +   + +  E  + I N L+     +  D R E    K  +  +
Sbjct: 462 LVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERAGVKFADADL 521

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
             +P+ +  G K A E  + ++   +  +++V + + 
Sbjct: 522 FGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEEL 557


>gi|301629493|ref|XP_002943874.1| PREDICTED: prolyl-tRNA synthetase-like [Xenopus (Silurana)
           tropicalis]
          Length = 657

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 39/199 (19%), Positives = 80/199 (40%), Gaps = 11/199 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       ++E   H+ + R   +  +   G+G+  +   G ++ + + + +R 
Sbjct: 3   ASQFFISTLKEAPADAEVVSHKLMLRAGLIKKL---GAGIYSYMPMGLRVIRKVEAIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E   P V    LWQ++G ++     +  +K   D     R F ++P +    
Sbjct: 60  EMDRAGAAECAMPVVQPAELWQETGRFEKMGPELLRIKDRHD-----RDFVVQPTSEEVV 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    L+SY++LP    +  + +R+E      GLMR R F   DA+ F          
Sbjct: 115 TDIARQELRSYKQLPRNFYQIQTKFRDERRPRF-GLMRGREFIMKDAYSFDRDPASAKAS 173

Query: 405 LKIH-NLIISIYKDFGFEK 422
            ++       I+  FG   
Sbjct: 174 YQVMAATYCRIFDRFGLRY 192


>gi|228940907|ref|ZP_04103466.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228973836|ref|ZP_04134412.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228980425|ref|ZP_04140735.1| Prolyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228779245|gb|EEM27502.1| Prolyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228785861|gb|EEM33864.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228818743|gb|EEM64809.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|326941586|gb|AEA17482.1| prolyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 566

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 89/203 (43%), Gaps = 11/203 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R +++     E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K      ++ R FAL   +      +    +KSY++L
Sbjct: 74  MQAAELWQESGRWYSYGSELMRMKD-----RNAREFALGATHEEVITDLVRDEVKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKD 417
           P+ L +  + +R+E      GL+R R F   DA+ F  T+E +     +++    +I+  
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEVYDRLYKAYSNIFAR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDAL 440
            G     V   +       +   
Sbjct: 188 CGLNFRAVIADSGAMGGKDTHEF 210



 Score = 79.1 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 61/157 (38%), Gaps = 11/157 (7%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G +  +        NA +++ +  K  P+++     G   R +  + E F     
Sbjct: 404 RGIEVGHVFKLGTRYSEAMNATFLDENG-KTQPLIMGCYGIGVS-RTVAAIAEQFNDENG 461

Query: 546 --LPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              P  ++P    V  +   + +  E  + I N L+     +  D R E    K  +  +
Sbjct: 462 LVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERAGVKFADADL 521

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
             +P+ +  G K A E  + ++   +  +++V + + 
Sbjct: 522 FGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEEL 557


>gi|323343555|ref|ZP_08083782.1| phosphoribulokinase [Prevotella oralis ATCC 33269]
 gi|323095374|gb|EFZ37948.1| phosphoribulokinase [Prevotella oralis ATCC 33269]
          Length = 553

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 90/242 (37%), Gaps = 3/242 (1%)

Query: 1   MPSDIKLTFPDGSI-KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-S 58
           M   I++   +    +   + +T  DV       +    +   +N KV  +   +     
Sbjct: 1   MKQLIQICCKNNKKTQEVVIGSTLYDVFNQFHLKMPFGPICAKVNNKVEGMHYRLYHNKD 60

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           +E +             +   ++ +AV  ++P  +V I   + +G+Y +     P    +
Sbjct: 61  VEFLDMTSGSGSRNYTRTLFFVLCKAVHDLFPRSEVVIDIPVSNGYYCNLSLGHPVGLQD 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           +  I  +MQ+II    P  +  +  E+A ++FE K +  K ++L SI      T Y+  +
Sbjct: 121 VDAIRGRMQQIIDEKIPIRRFEVRTEEAVKMFEEKGDEAKAKLLRSI-GSLYTTYYQMDD 179

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D   G  + +T  +  F       G   R  S +           +   E+ +  +  
Sbjct: 180 YVDYYYGSLLTNTKDLYLFGVEKYYDGILLRIPSQKNPEQLGELIRQDKMFEIFKEHHRW 239

Query: 239 EE 240
           + 
Sbjct: 240 QH 241


>gi|301055309|ref|YP_003793520.1| prolyl-tRNA synthetase [Bacillus anthracis CI]
 gi|300377478|gb|ADK06382.1| prolyl-tRNA synthetase [Bacillus cereus biovar anthracis str. CI]
          Length = 566

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 89/203 (43%), Gaps = 11/203 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R +++     E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K      ++ R FAL   +      +    +KSY++L
Sbjct: 74  MQAAELWQESGRWYSYGSELMRMKD-----RNAREFALGATHEEVITDLVRDEVKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKD 417
           P+ L +  + +R+E      GL+R R F   DA+ F  T+E +     +++    +I+  
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEVYDRLYKAYSNIFAR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDAL 440
            G     V   +       +   
Sbjct: 188 CGLNFRAVIADSGAMGGKDTHEF 210



 Score = 79.1 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 61/157 (38%), Gaps = 11/157 (7%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G +  +        NA +++ +  K  P+++     G   R +  + E F     
Sbjct: 404 RGIEVGHVFKLGTRYSEAMNATFLDENG-KTQPLIMGCYGIGVS-RTVAAIAEQFNDENG 461

Query: 546 --LPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              P  ++P    V  +   + +  E  + I N L+     +  D R E    K  +  +
Sbjct: 462 LVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERAGVKFADADL 521

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
             +P+ +  G K A E  + ++   +  +++V + + 
Sbjct: 522 FGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEEL 557


>gi|228986962|ref|ZP_04147088.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
 gi|228772740|gb|EEM21180.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
          Length = 566

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 89/203 (43%), Gaps = 11/203 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R +++     E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K      ++ R FAL   +      +    +KSY++L
Sbjct: 74  MQAAELWQESGRWYSYGSELMRMKD-----RNAREFALGATHEEVITDLVRDEVKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKD 417
           P+ L +  + +R+E      GL+R R F   DA+ F  T+E +     +++    +I+  
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEVYDRLYKAYSNIFAR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDAL 440
            G     V   +       +   
Sbjct: 188 CGLNFRAVIADSGAMGGKDTHEF 210



 Score = 79.1 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 61/157 (38%), Gaps = 11/157 (7%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G +  +        NA +++ +  K  P+++     G   R +  + E F     
Sbjct: 404 RGIEVGHVFKLGTRYSEAMNATFLDENG-KTQPLIMGCYGIGVS-RTVAAIAEQFNDESG 461

Query: 546 --LPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              P  ++P    V  +   + +  E  + I N L+     +  D R E    K  +  +
Sbjct: 462 LVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERAGVKFADADL 521

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
             +P+ +  G K A E  + ++   +  +++V + + 
Sbjct: 522 FGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEEL 557


>gi|229031449|ref|ZP_04187449.1| Prolyl-tRNA synthetase [Bacillus cereus AH1271]
 gi|228729738|gb|EEL80718.1| Prolyl-tRNA synthetase [Bacillus cereus AH1271]
          Length = 566

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 89/203 (43%), Gaps = 11/203 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R +++     E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K      ++ R FAL   +      +    +KSY++L
Sbjct: 74  MQAAELWQESGRWYSYGSELMRMKD-----RNAREFALGATHEEVITDLVRDEVKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKD 417
           P+ L +  + +R+E      GL+R R F   DA+ F  T+E +     +++    +I+  
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEVYDRLYKAYSNIFAR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDAL 440
            G     V   +       +   
Sbjct: 188 CGLNFRAVIADSGAMGGKDTHEF 210



 Score = 79.1 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 61/157 (38%), Gaps = 11/157 (7%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G +  +        NA +++ +  K  P+++     G   R +  + E F     
Sbjct: 404 RGIEVGHVFKLGTRYSEAMNATFLDENG-KTQPLIMGCYGIGVS-RTVAAIAEQFNDENG 461

Query: 546 --LPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              P  ++P    V  +   + +  E  + I N L+     +  D R E    K  +  +
Sbjct: 462 LVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERAGVKFADADL 521

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
             +P+ +  G K A E  + ++   +  +++V + + 
Sbjct: 522 FGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEEL 557


>gi|42524428|ref|NP_969808.1| prolyl-tRNA synthetase [Bdellovibrio bacteriovorus HD100]
 gi|81616476|sp|Q6MIW2|SYP_BDEBA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|39576637|emb|CAE80801.1| proS [Bdellovibrio bacteriovorus HD100]
          Length = 499

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 56/405 (13%), Positives = 137/405 (33%), Gaps = 74/405 (18%)

Query: 270 RKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCA--- 324
             G+ +++ +   + R  KD  +     P ++     + ++ H + +      V      
Sbjct: 41  PWGYAVWENMQGVLDRMFKDTGHVNAYFPLLIPLSFLEKEAAHVEGFAKECAVVTHHRLK 100

Query: 325 -------DDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
                      +      ++P +       F   +KSYR+LP+ + ++ +V R E     
Sbjct: 101 GDGNGKLIPDGELEEPLIIRPTSETIIGHQFAKWVKSYRDLPILVNQWCNVMRWEMR--T 158

Query: 378 HGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
              +R   F   + H    T ++   E L++ N+     + +    ++  + T  E+   
Sbjct: 159 RMFLRTAEFLWQEGHTVHATAKEAQEETLQMLNVYSEFAEQYMAMPVIKGMKTPDERF-- 216

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
                                              GA      E +++D   +  Q GT 
Sbjct: 217 ----------------------------------PGAVDTYTIEALMQD--KKALQAGTS 240

Query: 497 Q-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLS 551
             +  N        Y+++  ++          +G   R IG +I     +    +P  L+
Sbjct: 241 HFLGQNFAKASEIKYLSAEGKEE---FAWTTSWGVSTRLIGGLIMTHSDDNGFVVPPRLA 297

Query: 552 PIQAIVTTIT------SSAVEYAQEIANLLKSHHL-----SIETDFRNETINYKIREHSI 600
           P+  ++  I       +  ++Y + +   LK+ +       ++ D R+     K  ++  
Sbjct: 298 PLHVVIIPIYRNDEERAQVLDYVKALEKDLKAQNYVGSSVRVKIDDRDMRGGEKAWQYIK 357

Query: 601 KKIPIIIICGDKEASERSIGI--RRFGSTTTQKVSLLDAIPILTK 643
           + +P+ +  G ++ ++  + +  R  G      +     +  +T 
Sbjct: 358 QGVPVRVEVGPRDMAKGEVFVGRRDRGPKEKASMERNAFVANITN 402


>gi|75760863|ref|ZP_00740877.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
 gi|218898971|ref|YP_002447382.1| prolyl-tRNA synthetase [Bacillus cereus G9842]
 gi|228902322|ref|ZP_04066479.1| Prolyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
 gi|228966764|ref|ZP_04127808.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|226731427|sp|B7IUH7|SYP_BACC2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|74491647|gb|EAO54849.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
 gi|218543850|gb|ACK96244.1| prolyl-tRNA synthetase [Bacillus cereus G9842]
 gi|228792863|gb|EEM40421.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228857291|gb|EEN01794.1| Prolyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
          Length = 566

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 89/203 (43%), Gaps = 11/203 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R +++     E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K      ++ R FAL   +      +    +KSY++L
Sbjct: 74  MQAAELWQESGRWYSYGSELMRMKD-----RNAREFALGATHEEVITDLVRDEIKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKD 417
           P+ L +  + +R+E      GL+R R F   DA+ F  T+E +     +++    +I+  
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEVYDRLYKAYSNIFAR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDAL 440
            G     V   +       +   
Sbjct: 188 CGLNFRAVIADSGAMGGKDTHEF 210



 Score = 78.7 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 61/157 (38%), Gaps = 11/157 (7%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G +  +        NA +++ +  K  P+++     G   R +  + E F     
Sbjct: 404 RGIEVGHVFKLGTRYSEAMNATFLDENG-KTQPLIMGCYGIGVS-RTVAAIAEQFNDENG 461

Query: 546 --LPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              P  ++P    V  +   + +  E  + I N L+     +  D R E    K  +  +
Sbjct: 462 LVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEKGYEVLLDDRAERAGVKFADADL 521

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
             +P+ +  G K A E  + ++   +  +++V + + 
Sbjct: 522 FGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEEL 557


>gi|229157395|ref|ZP_04285473.1| Prolyl-tRNA synthetase [Bacillus cereus ATCC 4342]
 gi|228626122|gb|EEK82871.1| Prolyl-tRNA synthetase [Bacillus cereus ATCC 4342]
          Length = 566

 Score =  135 bits (339), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 89/203 (43%), Gaps = 11/203 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R +++     E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K      ++ R FAL   +      +    +KSY++L
Sbjct: 74  MQAAELWQESGRWYSYGSELMRMKD-----RNAREFALGATHEEVITDLVRDEVKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKD 417
           P+ L +  + +R+E      GL+R R F   DA+ F  T+E +     +++    +I+  
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEVYDRLYKAYSNIFAR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDAL 440
            G     V   +       +   
Sbjct: 188 CGLNFRAVIADSGAMGGKDTHEF 210



 Score = 77.9 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 61/157 (38%), Gaps = 11/157 (7%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G +  +        NA +++ +  K  P+++     G   R +  + E F     
Sbjct: 404 RGIEVGHVFKLGTRYSEAMNATFLDENG-KTQPLIMGCYGIGVS-RTVAAIAEQFNDESG 461

Query: 546 --LPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              P  ++P    V  +   + +  E  + I N L+     +  D R E    K  +  +
Sbjct: 462 LVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERAGVKFADADL 521

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
             +P+ +  G K A E  + ++   +  +++V + + 
Sbjct: 522 FGLPVRVTVGKK-ADEGIVEVKVRATAESEEVKVEEL 557


>gi|42782910|ref|NP_980157.1| prolyl-tRNA synthetase [Bacillus cereus ATCC 10987]
 gi|217961239|ref|YP_002339807.1| prolyl-tRNA synthetase [Bacillus cereus AH187]
 gi|229140460|ref|ZP_04269015.1| Prolyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
 gi|81409464|sp|Q732Q0|SYP1_BACC1 RecName: Full=Prolyl-tRNA synthetase 1; AltName: Full=Proline--tRNA
           ligase 1; Short=ProRS 1
 gi|226731429|sp|B7HLF2|SYP_BACC7 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|42738837|gb|AAS42765.1| prolyl-tRNA synthetase [Bacillus cereus ATCC 10987]
 gi|217063356|gb|ACJ77606.1| prolyl-tRNA synthetase [Bacillus cereus AH187]
 gi|228643021|gb|EEK99297.1| Prolyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
 gi|324327716|gb|ADY22976.1| prolyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 566

 Score =  135 bits (339), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 89/203 (43%), Gaps = 11/203 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R +++     E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K      ++ R FAL   +      +    +KSY++L
Sbjct: 74  MQAAELWQESGRWYSYGSELMRMKD-----RNAREFALGATHEEVITDLVRDEVKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKD 417
           P+ L +  + +R+E      GL+R R F   DA+ F  T+E +     +++    +I+  
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEVYDRLYKAYSNIFAR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDAL 440
            G     V   +       +   
Sbjct: 188 CGLNFRAVIADSGAMGGKDTHEF 210



 Score = 79.1 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 61/157 (38%), Gaps = 11/157 (7%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G +  +        NA +++ +  K  P+++     G   R +  + E F     
Sbjct: 404 RGIEVGHVFKLGTRYSEAMNATFLDENG-KTQPLIMGCYGIGVS-RTVAAIAEQFNDENG 461

Query: 546 --LPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              P  ++P    V  +   + +  E  + I N L+     +  D R E    K  +  +
Sbjct: 462 LVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERAGVKFADADL 521

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
             +P+ +  G K A E  + ++   +  +++V + + 
Sbjct: 522 FGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEEL 557


>gi|160900913|ref|YP_001566495.1| prolyl-tRNA synthetase [Delftia acidovorans SPH-1]
 gi|226699138|sp|A9BP65|SYP_DELAS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|160366497|gb|ABX38110.1| prolyl-tRNA synthetase [Delftia acidovorans SPH-1]
          Length = 581

 Score =  135 bits (339), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 39/217 (17%), Positives = 87/217 (40%), Gaps = 11/217 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       ++E   H+ + R   +  +   G+G+  +   G ++ + + + +R 
Sbjct: 3   ASQFFISTLKEAPADAEVVSHKLMTRAGLIKKL---GAGIYNYMPMGLRVIRKVEAIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    +W+++G ++     +  +K      +  R F ++P +    
Sbjct: 60  EMNRAGAVEVTMPVVQPAEMWEETGRFEKMGPELLRIKD-----RHGRDFVIQPTSEEVV 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
             +    LKSY++LP    +  + +R+E      GLMR R F   DA+ F    +     
Sbjct: 115 TDIARQELKSYKQLPKNFYQIQTKFRDERRPRF-GLMRGREFIMKDAYSFDKDRDTAQIS 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
              +      I+  FG +   V+  +       S+  
Sbjct: 174 YQTMRAAYKRIFDRFGLQYRAVRADSGAIGGDLSEEF 210



 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 60/168 (35%), Gaps = 13/168 (7%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFK 543
           AI R  + G +  +        NA ++  + +   P +     +G  + R     IE   
Sbjct: 413 AIERGIEVGHVFYLGTKYSQAMNATFLAENGK---PSLFEMGCYGIGVTRLPAAAIEQNH 469

Query: 544 GN----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
                  P  ++P   +V  I    +    E A+++   L +  + +  D R E      
Sbjct: 470 DERGIIWPDAIAPFTVVVCPIGMDRSEPVKEAAEKLHAELLALGVDVILDDRGERPGAMF 529

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +  +  +P  ++  D+   E  +  +    T   K++  D +  L +
Sbjct: 530 ADWELIGVPHRVVLSDRGLKEGQVEYQHRRDTEATKMAAADVLGHLKQ 577


>gi|288818560|ref|YP_003432908.1| prolyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|288787960|dbj|BAI69707.1| prolyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|308752150|gb|ADO45633.1| prolyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
          Length = 569

 Score =  135 bits (339), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 86/203 (42%), Gaps = 11/203 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L +      I +  SG+  +   G+++ + + + +R+++     +E+    
Sbjct: 17  DAEAPSHKYLLKGG---FIKQVASGIYAFTPAGYRVLKKIENIVRKEMDRSGAQELLLTV 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW+++G WD Y   +F +K      +  R + L P +      +    + SYR+L
Sbjct: 74  LNPAELWRETGRWDLYGRELFTLKD-----RHGRDYCLGPTHEEEITDMVRTFVNSYRQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL-IISIYKD 417
           P  L +    +R+E      GL+R R F   DA+ F T E       +        I+K 
Sbjct: 129 PFILYQIQVKFRDEKRPRF-GLIRGREFIMKDAYSFDTDEFSALMSYETMKFAYERIFKK 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDAL 440
              + +MV+ S      + S   
Sbjct: 188 LRLKTLMVEASVGAIGGMSSHEF 210



 Score = 85.2 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 40/224 (17%), Positives = 79/224 (35%), Gaps = 25/224 (11%)

Query: 440 LWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI------------LKDAI 487
           +WD++   +K  +          IN     G    YG  F+                  +
Sbjct: 344 IWDNSVYGIKNAVVAFNEPDYHYINA--NPGRDFSYGEFFDVAQVVEKDPCPKCGAPLKV 401

Query: 488 GRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF---- 542
            +  + G I +          AFY +   E   P+ +     G I R +  ++E +    
Sbjct: 402 SKGLELGHIFLLGTRYSLPMKAFYKDQQGEDK-PIYMGCYGIG-ISRCMSAIVEQYSDEL 459

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEY---AQEIANLLKSHHLSIETDFRNETINYKIREHS 599
               P  ++P +  V  +  S  E    A++I    +   L +  D R  +  +K  +  
Sbjct: 460 GIKWPTVVAPFELNVICLNPSDAEQKTVAEKIYYQAQEMGLDVIYDDREASAGFKFADAD 519

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +   P  I+ G K   E  + +++  +     V + DA+ I+ +
Sbjct: 520 LCGFPYRIVVGKK-TKEGKVELQKRHTGEKLDVPIEDAVRIVKE 562


>gi|73748213|ref|YP_307452.1| prolyl-tRNA synthetase [Dehalococcoides sp. CBDB1]
 gi|114152188|sp|Q3ZZD0|SYP_DEHSC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|73659929|emb|CAI82536.1| prolyl-tRNA synthetase [Dehalococcoides sp. CBDB1]
          Length = 569

 Score =  135 bits (339), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 50/217 (23%), Positives = 93/217 (42%), Gaps = 11/217 (5%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DD 290
                   ++E   H+ L R      IA+  +GV  +    W+  Q + + +R+++    
Sbjct: 9   KTQREIPSDAETISHQLLLRSGM---IAQLTAGVYSFMPLAWRSIQKIENIIRQEMNKAG 65

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH 350
            +E+  P +    +WQQSG    +   +F +K   D     R   L P +      + + 
Sbjct: 66  CQELAMPVLQPVEIWQQSGREAPFGQTLFHLKDRKD-----RNLVLGPTHEEVITDLASR 120

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHN 409
            ++SYR+LP RL +  + +R+EP     GL+RVR F   D + F  + E + +    +  
Sbjct: 121 YIQSYRDLPQRLYQIQAKFRDEPRPR-GGLIRVREFIMKDMYSFDASPEGLDDSYQTMKQ 179

Query: 410 LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
              S+Y+  G E +++   +       S      AE+
Sbjct: 180 AYESVYRRCGLESMVIDADSGAIGGKASHEFMIVAES 216



 Score = 86.0 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 62/164 (37%), Gaps = 10/164 (6%)

Query: 486 AIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFK 543
           A  R  + G I  +   L  RF A + ++     HP+++     G + R +   IE N  
Sbjct: 398 ASKRGVEVGHIFKLGTFLSERFGANFTDAEGV-SHPIIMGCYGMG-VGRLLAAAIEQNHD 455

Query: 544 GNLPLWL---SPIQAIVTT---ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
               +W    +P Q  +           E A++I   L++  + +  D R  T   K  +
Sbjct: 456 EKGIIWPMPIAPYQVYICGLFLDNPVVRESAEKIYAELEAKGIEVLFDDRELTAGVKFND 515

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
             +  IP+ +    +   +  +  +   +  ++ V L   +  +
Sbjct: 516 ADLLGIPLRLTISPRNLDKGGVEFKLRRNKESELVPLDSIVERV 559


>gi|225550771|ref|ZP_03771720.1| proline--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
 gi|225379925|gb|EEH02287.1| proline--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
          Length = 472

 Score =  135 bits (339), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 68/392 (17%), Positives = 143/392 (36%), Gaps = 52/392 (13%)

Query: 261 DGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD-QHLWQQSGHWDSYRANM 318
           D  G++ +    W I++ + + +  + K      +  P ++      ++  H + +   +
Sbjct: 33  DIKGMMVFQPNAWAIWEAIKNQIDLEFKKHGVRNLAMPTLIPLSEFQKEKDHIEGFAPEL 92

Query: 319 FAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLH 378
           F V    D   D   +A++P +       F + + SY +LP++  ++ SV R E   +  
Sbjct: 93  FMVNQIGDKKLDN-PYAIRPTSEILFCNYFKNIVNSYNDLPIKNNQWCSVMRAEK--TTR 149

Query: 379 GLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD 438
             +R   F   + H     E   +E  K    I+ +Y DF                    
Sbjct: 150 PFLRNAEFHWQELHAIFASEHEADEFAKT---ILDVYTDF-------------------- 186

Query: 439 ALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
                       V + +       + T      GA      E +++D  G+  Q  T   
Sbjct: 187 ------------VQNYLCIPVIKGLKTPWERFAGAQKTYTIEAMMQD--GQALQSATSHY 232

Query: 499 -DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI---- 553
                   ++  +    ++  +   +H+   G   R IG +I     +  L L P     
Sbjct: 233 LGQFFAKAYDIKFQGQDNQMHY---VHQMSAGLSTRIIGALIMVHADDQGLILPPDIAFN 289

Query: 554 QAIVTTITSSAVEYAQEIANLLKSH--HLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
           Q  + +I ++       I+  +++      +  D  ++ + YK+ +  I+  PI I+ G 
Sbjct: 290 QIAILSIFANKNPQLLTISEQIRNELSDYRLFEDHSDKGVGYKLAQQEIEGTPICILVGV 349

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           KE + + + + R  +     V+L+D    + K
Sbjct: 350 KELANQQVVLVRRDTHEKINVNLVDLESTVKK 381


>gi|196036918|ref|ZP_03104302.1| prolyl-tRNA synthetase [Bacillus cereus W]
 gi|195990473|gb|EDX54457.1| prolyl-tRNA synthetase [Bacillus cereus W]
          Length = 566

 Score =  135 bits (339), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 89/203 (43%), Gaps = 11/203 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R +++     E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K      ++ R FAL   +      +    +KSY++L
Sbjct: 74  MQAAELWQESGRWYSYGSELMRMKD-----RNAREFALGATHEEVITDLVRDEVKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKD 417
           P+ L +  + +R+E      GL+R R F   DA+ F  T+E +     +++    +I+  
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEVYDRLYKAYSNIFAR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDAL 440
            G     V   +       +   
Sbjct: 188 CGLNFRAVIADSGAMGGKDTHEF 210



 Score = 79.1 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 61/157 (38%), Gaps = 11/157 (7%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G +  +        NA +++ +  K  P+++     G   R +  + E F     
Sbjct: 404 RGIEVGHVFKLGTRYSEAMNATFLDENG-KTQPLIMGCYGIGVS-RTVAAIAEQFNDENG 461

Query: 546 --LPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              P  ++P    V  +   + +  E  + I N L+     +  D R E    K  +  +
Sbjct: 462 LVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERAGVKFADADL 521

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
             +P+ +  G K A E  + ++   +  +++V + + 
Sbjct: 522 FGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEEL 557


>gi|323489584|ref|ZP_08094811.1| prolyl-tRNA synthetase 1 [Planococcus donghaensis MPA1U2]
 gi|323396715|gb|EGA89534.1| prolyl-tRNA synthetase 1 [Planococcus donghaensis MPA1U2]
          Length = 567

 Score =  135 bits (339), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 51/208 (24%), Positives = 91/208 (43%), Gaps = 11/208 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E R H+ L R      I ++ SG+  +   G ++ Q + + +R +++  +  EI  P 
Sbjct: 17  DAEVRSHQLLLRAG---FIRQNTSGIYSFLPLGKRVLQKVETVIREEMEAANSVEIFMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY   +  +K  +D     R FAL   +     ++    +KSY++L
Sbjct: 74  LQQAELWQESGRWYSYGDELMRLKDRND-----REFALGATHEEVITSLLRDEIKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKD 417
           P+ L +  S +R+E      GL+R R F   DA+ F  T E +      +     +I+  
Sbjct: 129 PLNLFQIQSKFRDEKRPRF-GLLRGREFLMKDAYSFHATTESLDETYDVMMQAYTNIFTR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAE 445
            G     V   +       +      +E
Sbjct: 188 LGLNFRAVIADSGAIGGKDNHEFMVLSE 215



 Score = 71.4 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 54/137 (39%), Gaps = 9/137 (6%)

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTIT---SSAVE 566
              K  P ++     G   R +  + E F+       P  ++P +  +  +     +  E
Sbjct: 429 DQGKSMPYIMGCYGIGVS-RVLAAVAEQFQDENGFTWPDVVAPYEVHLVPVNVKDDTQRE 487

Query: 567 YAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS 626
             +E+  LLK +   +  D R E    K  +  +  +PI I  G K A+E  + ++   +
Sbjct: 488 LGEELYALLKENRYEVLLDDRKERAGVKFADADLIGLPIRITIGKK-AAEGILEVKIRRT 546

Query: 627 TTTQKVSLLDAIPILTK 643
             T + +  + +  + +
Sbjct: 547 GETFEWTRDEVLEKIQQ 563


>gi|225849769|ref|YP_002730003.1| prolyl-tRNA synthetase [Persephonella marina EX-H1]
 gi|254782911|sp|C0QTI8|SYP_PERMH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|225645347|gb|ACO03533.1| prolyl-tRNA synthetase [Persephonella marina EX-H1]
          Length = 563

 Score =  135 bits (339), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 48/217 (22%), Positives = 91/217 (41%), Gaps = 11/217 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  +        E+E   H  L R   +  +A    G+  +   G+++ + +   +R+
Sbjct: 3   ASQYFIPTLKEAPAEAEVPSHIYLIRAGFIRQLAA---GLYEYLPLGFRVLKKIEGIIRK 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
            +      E+  P +    LWQ++G WD Y   +F V+      +  R FAL P +    
Sbjct: 60  YMDDAGALEVLLPILAPAELWQETGRWDVYGKELFRVED-----RKGRFFALGPTHEETI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    ++SY++LP    +  + +R+E     +GL+R R F   DA+ F   E+M  + 
Sbjct: 115 TDLVRKNIRSYKDLPKNFYQIQTKFRDEARPR-YGLIRGREFIMKDAYSFDISEEMAVKS 173

Query: 405 LKIH-NLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            +I       I+ + G + +MV+          S   
Sbjct: 174 YEIMKEAYKKIFDELGLDYLMVEADVGAIGGKYSHEF 210



 Score = 79.4 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 20/150 (13%), Positives = 55/150 (36%), Gaps = 8/150 (5%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL---SPIQ 554
           +         A++V+    +  P+++     G        + ++   N  +W    +P +
Sbjct: 413 LGTKYSEALKAYFVDKDG-REKPIVMGCYGIGVSRLMAAAVEQSHDENGIIWPENIAPFK 471

Query: 555 AIVT--TITSSAVE-YAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
             +    I    ++  A++I    K   + +  D R+ +   K ++  +  IP  I+ G 
Sbjct: 472 LHILALNIKDDQIKTVAEDIYTKAKEKGIEVLFDDRDISPGAKFKDADLIGIPYRIVVG- 530

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           +      + I+       +++ + +    L
Sbjct: 531 RGVKNGKVEIQTRKDGKKEEIDINEIDNFL 560


>gi|172040525|ref|YP_001800239.1| prolyl-tRNA synthetase [Corynebacterium urealyticum DSM 7109]
 gi|226699134|sp|B1VGB6|SYP_CORU7 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|171851829|emb|CAQ04805.1| unnamed protein product [Corynebacterium urealyticum DSM 7109]
          Length = 592

 Score =  135 bits (339), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 43/235 (18%), Positives = 96/235 (40%), Gaps = 11/235 (4%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +  +A    GV  W   G ++ + + + +RR++     +E+  P 
Sbjct: 19  DAELASHKLLVRAGYIRRVA---PGVYSWLPMGLRVLRKVENVVRREMDAIGGQELMFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++ +  WD Y   +F +K   +       + L P +      +    L SY++ 
Sbjct: 76  LLPKEPYEVTRRWDEYGPELFRLKDRKEA-----DYLLGPTHEELFTWLVKGELNSYKDF 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKD 417
           P  L +  + YR+E      G++R R F   D++ F   ++  +E  ++H      I+  
Sbjct: 131 PKVLYQIQTKYRDEARPR-AGILRGREFVMKDSYSFNMTDEGLDESYRLHRKAYQRIFDA 189

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
            G E ++   ++       S+     A +     + + ++     +   V +   
Sbjct: 190 LGIEYVICYATSGAMGGSASEEFLAVAADGEDTFVRSTESDYAANVEAVVSIPPA 244



 Score = 88.3 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 47/300 (15%), Positives = 105/300 (35%), Gaps = 27/300 (9%)

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDA----HVFCTKEQMFNECLKIHNLIISIYKDFG 419
           E G+ Y  E +G L    R     + +A     V    +    +            + F 
Sbjct: 304 EDGNPYAPELTGVLVPGDREVDMKRLEASLEPAVVELADDEDFKKYPFLVKGFVGPRTFA 363

Query: 420 FEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
              + +    R         G+D   D   + +    D   +   +     V  G+    
Sbjct: 364 DNDLRMLADPRVVKGTAWITGADEK-DRHYSNLVAGRDFTPDGYVEA--AEVREGD---- 416

Query: 476 GPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
            P  +      + R  + G I Q+       F+   ++ +  +  P M    +   + R 
Sbjct: 417 -PSPDGKGVLTLSRGIEIGHIFQLGRKYTEAFDVQILDENGRRTVPTMGSYGI--GVSRL 473

Query: 535 IGIMIENFKG----NLPLWLSP--IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRN 588
           + ++ E          P  ++P  +  ++     +A E A+E+A  L    L +  D R 
Sbjct: 474 LAVVAEQMHDEKGLRWPRSIAPYDVHVVIANKDEAAGEAARELAEALSDAGLEVLFDDRP 533

Query: 589 E-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLP 647
           + +   K ++  +  +P +++ G +  +E  + +R   +    ++   DA+ ++TK +  
Sbjct: 534 KVSPGVKFKDSELLGMPQVVVVG-RGFAEGKVELRDRLNDERSEIDYADAVDVITKAARA 592


>gi|317969639|ref|ZP_07971029.1| prolyl-tRNA synthetase [Synechococcus sp. CB0205]
          Length = 633

 Score =  135 bits (339), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 53/209 (25%), Positives = 87/209 (41%), Gaps = 8/209 (3%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E   H+ L R   +  I   GSG+  +    W++ Q + + +R ++      E   PQ
Sbjct: 42  EAEIASHKLLLRAGYIRRI---GSGIYAYLPLLWRVLQKVSAVVREELNAAGALETLLPQ 98

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W  Y      +   +D  +  R   L P +     A+    L+SYR+L
Sbjct: 99  LQPSELWQRSGRWAGYTDGEGIMFHLED--RQGRELGLGPTHEEVITALAADLLRSYRQL 156

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH-NLIISIYKD 417
           PV L +  + +R+E      GLMR R F   DA+ F   E    +   +       I++ 
Sbjct: 157 PVNLYQVQTKFRDEIRPRF-GLMRGREFIMKDAYSFHANEDCLKQTYGLMDQAYRRIFQR 215

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
            G   + V+  +       S      AE+
Sbjct: 216 CGLRAVAVEADSGAIGGSASQEFMVTAES 244



 Score = 83.7 bits (205), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 64/160 (40%), Gaps = 9/160 (5%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I Q+     +  +A + N   ++  P+ +     G        + ++   N  
Sbjct: 459 RGIEVGHIFQLGRKYSTALDATFTNESGQEE-PLWMGCYGIGVSRLAQAAVEQHHDANGI 517

Query: 548 LWL---SPIQAIVT---TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            W    +P + IV       +  V+ A+ + + L++  + +  D R+E    K ++  + 
Sbjct: 518 CWPTAIAPYEVIVVIANVKATEQVDLAEGLYDQLQAAGVDVLLDDRSERAGVKFKDTELL 577

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            IP  ++ G + A+E  + + +  +   Q ++       L
Sbjct: 578 GIPWRVVVG-RGAAEGQVELVQRSTGAKQDLAADQLEATL 616


>gi|115350544|ref|YP_772383.1| prolyl-tRNA synthetase [Burkholderia ambifaria AMMD]
 gi|122324080|sp|Q0BIH4|SYP_BURCM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|115280532|gb|ABI86049.1| prolyl-tRNA synthetase [Burkholderia ambifaria AMMD]
          Length = 578

 Score =  135 bits (339), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 46/207 (22%), Positives = 84/207 (40%), Gaps = 11/207 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ + R   +  +A    G+  +   G +  + + + +R ++      E+  P 
Sbjct: 17  DAEIVSHKLMVRAGMIRRVA---GGIYNYLPVGLRSIRKVEAIVREEMNRAGAIELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    LWQ+SG W+ Y   +   K   D       F + P +      +  + +KSYR++
Sbjct: 74  VQPAELWQESGRWEQYGPELLRFKDRKDN-----DFVIGPTHEEVVTDIARNQIKSYRQM 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKD 417
           PV   +  + +R+E      G+MR R F   DA+ F       NE   K+++  + I+  
Sbjct: 129 PVNFYQIQTKFRDEIRPRF-GVMRGREFLMKDAYSFDKDTAGLNESYRKMYDAYVRIFTR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDA 444
            G E   V   +       S      A
Sbjct: 188 LGLEFRAVAADSGSIGGNFSHEFHVIA 214



 Score = 83.3 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 62/164 (37%), Gaps = 11/164 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNL 546
           R  + G + Q+         A +++   +   P+++     G I R +G  IE NF    
Sbjct: 409 RGIEVGHVFQLGTKYSDAMGATFLDESGKPQ-PMLMGCYGVG-ITRILGAAIEQNFDDKG 466

Query: 547 PLWL---SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
            +W    +P + ++  +    +    E A ++   L +  + +  D R E       +  
Sbjct: 467 IIWPESIAPFEVVLCPMGYDRSDMVREAADKLYAELAAAGIDVILDDRGERPGVMFADWE 526

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  +P  ++ G++   E  I  +         +   +A   +T+
Sbjct: 527 LIGVPHRLVIGERGLKEGKIEYQGRRDAEATLLPADEAAATVTE 570


>gi|30263823|ref|NP_846200.1| prolyl-tRNA synthetase [Bacillus anthracis str. Ames]
 gi|47529247|ref|YP_020596.1| prolyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49186669|ref|YP_029921.1| prolyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|65321146|ref|ZP_00394105.1| COG0442: Prolyl-tRNA synthetase [Bacillus anthracis str. A2012]
 gi|118479041|ref|YP_896192.1| prolyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|165872601|ref|ZP_02217232.1| prolyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167635829|ref|ZP_02394138.1| prolyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|167639857|ref|ZP_02398126.1| prolyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|170687854|ref|ZP_02879068.1| prolyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|170706810|ref|ZP_02897268.1| prolyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|177652150|ref|ZP_02934696.1| prolyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190568409|ref|ZP_03021316.1| prolyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|196042144|ref|ZP_03109427.1| proline--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|196044700|ref|ZP_03111935.1| prolyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|218904947|ref|YP_002452781.1| prolyl-tRNA synthetase [Bacillus cereus AH820]
 gi|225865800|ref|YP_002751178.1| prolyl-tRNA synthetase [Bacillus cereus 03BB102]
 gi|227813273|ref|YP_002813282.1| prolyl-tRNA synthetase [Bacillus anthracis str. CDC 684]
 gi|228916456|ref|ZP_04080022.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|228928867|ref|ZP_04091899.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228947538|ref|ZP_04109828.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|229092859|ref|ZP_04223993.1| Prolyl-tRNA synthetase [Bacillus cereus Rock3-42]
 gi|229123332|ref|ZP_04252536.1| Prolyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|229186058|ref|ZP_04313228.1| Prolyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
 gi|229602364|ref|YP_002868057.1| proline--tRNA ligase [Bacillus anthracis str. A0248]
 gi|254683474|ref|ZP_05147334.1| prolyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066]
 gi|254721995|ref|ZP_05183784.1| prolyl-tRNA synthetase [Bacillus anthracis str. A1055]
 gi|254735857|ref|ZP_05193563.1| prolyl-tRNA synthetase [Bacillus anthracis str. Western North
           America USA6153]
 gi|254739617|ref|ZP_05197311.1| prolyl-tRNA synthetase [Bacillus anthracis str. Kruger B]
 gi|254756010|ref|ZP_05208041.1| prolyl-tRNA synthetase [Bacillus anthracis str. Vollum]
 gi|254759329|ref|ZP_05211354.1| prolyl-tRNA synthetase [Bacillus anthracis str. Australia 94]
 gi|81583682|sp|Q81WL6|SYP1_BACAN RecName: Full=Prolyl-tRNA synthetase 1; AltName: Full=Proline--tRNA
           ligase 1; Short=ProRS 1
 gi|152074739|sp|A0RHJ2|SYP1_BACAH RecName: Full=Prolyl-tRNA synthetase 1; AltName: Full=Proline--tRNA
           ligase 1; Short=ProRS 1
 gi|226731426|sp|B7JJ97|SYP_BACC0 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|254782882|sp|C3P5M1|SYP_BACAA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|254782883|sp|C3L7A8|SYP_BACAC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|254782884|sp|C1EP43|SYP_BACC3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|30258467|gb|AAP27686.1| proline--tRNA ligase [Bacillus anthracis str. Ames]
 gi|47504395|gb|AAT33071.1| prolyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49180596|gb|AAT55972.1| prolyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|118418266|gb|ABK86685.1| proline--tRNA ligase [Bacillus thuringiensis str. Al Hakam]
 gi|164711633|gb|EDR17179.1| prolyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167512258|gb|EDR87635.1| prolyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|167528786|gb|EDR91544.1| prolyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|170128228|gb|EDS97097.1| prolyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|170668170|gb|EDT18919.1| prolyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|172082519|gb|EDT67584.1| prolyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190560413|gb|EDV14391.1| prolyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|196024735|gb|EDX63407.1| prolyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|196026996|gb|EDX65620.1| proline--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|218535709|gb|ACK88107.1| prolyl-tRNA synthetase [Bacillus cereus AH820]
 gi|225789269|gb|ACO29486.1| proline--tRNA ligase [Bacillus cereus 03BB102]
 gi|227007610|gb|ACP17353.1| proline--tRNA ligase [Bacillus anthracis str. CDC 684]
 gi|228597477|gb|EEK55127.1| Prolyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
 gi|228660108|gb|EEL15744.1| Prolyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|228690481|gb|EEL44264.1| Prolyl-tRNA synthetase [Bacillus cereus Rock3-42]
 gi|228812058|gb|EEM58389.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228830674|gb|EEM76279.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228843035|gb|EEM88117.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|229266772|gb|ACQ48409.1| proline--tRNA ligase [Bacillus anthracis str. A0248]
          Length = 566

 Score =  135 bits (339), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 89/203 (43%), Gaps = 11/203 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R +++     E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K      ++ R FAL   +      +    +KSY++L
Sbjct: 74  MQAAELWQESGRWYSYGSELMRMKD-----RNAREFALGATHEEVITDLVRDEVKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKD 417
           P+ L +  + +R+E      GL+R R F   DA+ F  T+E +     +++    +I+  
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEVYDRLYKAYSNIFAR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDAL 440
            G     V   +       +   
Sbjct: 188 CGLNFRAVIADSGAMGGKDTHEF 210



 Score = 79.1 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 61/157 (38%), Gaps = 11/157 (7%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G +  +        NA +++ +  K  P+++     G   R +  + E F     
Sbjct: 404 RGIEVGHVFKLGTRYSEAMNATFLDENG-KTQPLIMGCYGIGVS-RTVAAIAEQFNDENG 461

Query: 546 --LPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              P  ++P    V  +   + +  E  + I N L+     +  D R E    K  +  +
Sbjct: 462 LVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERAGVKFADADL 521

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
             +P+ +  G K A E  + ++   +  +++V + + 
Sbjct: 522 FGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEEL 557


>gi|282916523|ref|ZP_06324281.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139]
 gi|283770327|ref|ZP_06343219.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
 gi|282319010|gb|EFB49362.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139]
 gi|283460474|gb|EFC07564.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
          Length = 567

 Score =  135 bits (339), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 47/252 (18%), Positives = 103/252 (40%), Gaps = 14/252 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        E+E + HR L +      I +  SG+  +     ++   + + +R++
Sbjct: 4   SKVFIPTMRDVPSEAEAQSHRLLLKSG---LIKQSTSGIYSYLPLATRVLNNITAIVRQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++  D  EI  P +    LW++SG W +Y   +  ++      +  R FAL P +     
Sbjct: 61  MERIDSVEILMPALQQAELWEESGRWGAYGPELMRLQD-----RHGRQFALGPTHEELVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           ++  + LKSY++LP+ L +  S +R+E      GL+R R F   DA+ F   E   ++  
Sbjct: 116 SIVRNELKSYKQLPMTLFQIQSKFRDEKRPRF-GLLRGREFIMKDAYSFHADEASLDQTY 174

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA---ENIMKGVLDTIKNSSQD 461
           + ++     I++  G     V   +       +      +   E+ +    ++   ++ +
Sbjct: 175 QDMYQAYSRIFERVGINARPVVADSGAIGGSHTHEFMALSAIGEDTIVYSKESDYAANIE 234

Query: 462 RINTGVLLGEGA 473
           +           
Sbjct: 235 KAEVVYEPNHKH 246



 Score = 72.1 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 24/152 (15%), Positives = 57/152 (37%), Gaps = 9/152 (5%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI- 556
           +        NA ++++   K  P+++     G       I+ +N   N  +W   +    
Sbjct: 413 LGTKYSESMNATFLDNQG-KAQPLIMGCYGIGISRTLSAIVEQNHDDNGIVWPKSVTPFD 471

Query: 557 -----VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
                +        E A  +     +    +  D R E    K  +  +  +P+ I+ G 
Sbjct: 472 LHLISINPKKDDQRELADALYAEFNTK-FDVLYDDRQERAGVKFNDADLIGLPLRIVVGK 530

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           + ASE  + ++   +  +++V + D + ++T 
Sbjct: 531 R-ASEGIVEVKERLTGDSEEVHIDDLMTVITN 561


>gi|241668104|ref|ZP_04755682.1| prolyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254876639|ref|ZP_05249349.1| prolyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254842660|gb|EET21074.1| prolyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 565

 Score =  135 bits (339), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 49/217 (22%), Positives = 87/217 (40%), Gaps = 11/217 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            TQ  +       +E+    H+ + +   +  +A   SG+  W   G K+ Q + + +R 
Sbjct: 3   ATQTLIATTKELPKEAVLTSHQYMLKAGLIKKLA---SGIYTWMPIGLKVLQKIQNIVRE 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P VL   L Q++  WD +   +  +K      +  R F   P +    
Sbjct: 60  EMNKAGASELLLPSVLPSELLQETHRWDKFGPELLKLKD-----RHERDFCYGPTHEEPI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           V +    +KSY++LP+ L +  + +R+E      G+MR R F   DA+ F    Q  +  
Sbjct: 115 VDMARDTIKSYKQLPLNLYQIQTKFRDEIRPRF-GVMRAREFIMKDAYSFHENSQCLHNT 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
             K+H    +I    G     V+  T       S   
Sbjct: 174 YNKMHETYCNILDKIGLVYRPVRADTGAIGGDNSHEF 210



 Score = 81.4 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 25/153 (16%), Positives = 55/153 (35%), Gaps = 10/153 (6%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPI 553
           ++       NA  ++    K  P+++    FG   R +   IE          P  ++P 
Sbjct: 415 LEDVYSKPMNANIISQDG-KSKPMLMGCYGFGVS-RVMAAAIEQSHDENGIIWPEAIAPY 472

Query: 554 QAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIIC 609
           Q  +  I    + S  + A ++   L +  + +  D R         +  +      ++ 
Sbjct: 473 QVAILPINYNKSESVKQTADKLYQELLAKGIDVILDDRGARPGVMFADADLIGYSHHVVI 532

Query: 610 GDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           GD+   +  I  +   +   Q+++L   + IL 
Sbjct: 533 GDRLLEQGLIEYKNRKTQEKQEITLEKLLDILA 565


>gi|116688611|ref|YP_834234.1| prolyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
 gi|170731910|ref|YP_001763857.1| prolyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
 gi|152016591|sp|A0K4B4|SYP_BURCH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226699124|sp|B1JVA5|SYP_BURCC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|116646700|gb|ABK07341.1| prolyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
 gi|169815152|gb|ACA89735.1| prolyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
          Length = 578

 Score =  135 bits (339), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 46/207 (22%), Positives = 84/207 (40%), Gaps = 11/207 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ + R   +  +A    G+  +   G +  + + + +R ++      E+  P 
Sbjct: 17  DAEIVSHKLMVRAGMIRRVA---GGIYNYLPVGLRSIRKVEAIVREEMNRAGAIELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    LWQ+SG W+ Y   +   K   D       F + P +      +  + +KSYR++
Sbjct: 74  VQPAELWQESGRWEQYGPELLRFKDRKDN-----DFVIGPTHEEVVTDIARNQIKSYRQM 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKD 417
           PV   +  + +R+E      G+MR R F   DA+ F       NE   K+++  + I+  
Sbjct: 129 PVNFYQIQTKFRDEIRPRF-GVMRGREFIMKDAYSFDKDAAGLNESYRKMYDAYVRIFTR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDA 444
            G E   V   +       S      A
Sbjct: 188 LGLEFRAVAADSGSIGGNFSHEFHVIA 214



 Score = 77.9 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 57/154 (37%), Gaps = 11/154 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNL 546
           R  + G + Q+         A +++   +   P+++     G I R +G  IE NF    
Sbjct: 409 RGIEVGHVFQLGTKYSEAMGATFLDESGKPQ-PMLMGCYGVG-ITRILGAAIEQNFDDKG 466

Query: 547 PLWL---SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
            +W    +P + ++  +    +    E A ++   L +  + +  D R E       +  
Sbjct: 467 IIWPESIAPFEVVLCPMGYDRSDMVRETADKLYAELVAAGIDVILDDRGERPGVMFADWE 526

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
           +  +P  ++ G++   E  I  +         + 
Sbjct: 527 LIGVPHRLVIGERGLKEGKIEYQGRRDAEATLLP 560


>gi|107021665|ref|YP_619992.1| prolyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
 gi|123072438|sp|Q1BZD6|SYP_BURCA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|105891854|gb|ABF75019.1| prolyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
          Length = 578

 Score =  135 bits (339), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 46/207 (22%), Positives = 84/207 (40%), Gaps = 11/207 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ + R   +  +A    G+  +   G +  + + + +R ++      E+  P 
Sbjct: 17  DAEIVSHKLMVRAGMIRRVA---GGIYNYLPVGLRSIRKVEAIVREEMNRAGAIELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    LWQ+SG W+ Y   +   K   D       F + P +      +  + +KSYR++
Sbjct: 74  VQPAELWQESGRWEQYGPELLRFKDRKDN-----DFVIGPTHEEVVTDIARNQIKSYRQM 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKD 417
           PV   +  + +R+E      G+MR R F   DA+ F       NE   K+++  + I+  
Sbjct: 129 PVNFYQIQTKFRDEIRPRF-GVMRGREFIMKDAYSFDKDAAGLNESYRKMYDAYVRIFTR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDA 444
            G E   V   +       S      A
Sbjct: 188 LGLEFRAVAADSGSIGGNFSHEFHVIA 214



 Score = 77.9 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 57/154 (37%), Gaps = 11/154 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNL 546
           R  + G + Q+         A +++   +   P+++     G I R +G  IE NF    
Sbjct: 409 RGIEVGHVFQLGTKYSEAMGATFLDESGKPQ-PMLMGCYGVG-ITRILGAAIEQNFDDKG 466

Query: 547 PLWL---SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
            +W    +P + ++  +    +    E A ++   L +  + +  D R E       +  
Sbjct: 467 IIWPESIAPFEVVLCPMGYDRSDMVRETADKLYAELVAAGIDVILDDRGERPGVMFADWE 526

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
           +  +P  ++ G++   E  I  +         + 
Sbjct: 527 LIGVPHRLVIGERGLKEGKIEYQGRRDAEATLLP 560


>gi|271963639|ref|YP_003337835.1| proline--tRNA ligase [Streptosporangium roseum DSM 43021]
 gi|270506814|gb|ACZ85092.1| Proline--tRNA ligase [Streptosporangium roseum DSM 43021]
          Length = 580

 Score =  135 bits (339), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 36/203 (17%), Positives = 78/203 (38%), Gaps = 11/203 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +  +A    G+  W   G  + + +   +R ++     +E+  P 
Sbjct: 19  DAEVPSHKLLVRAGYVRRVA---PGIYSWLPLGKMVLENVTRIVREEMNRMGGQEVLFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++ +G W  Y   +F ++      +    + L P +      +      SY++ 
Sbjct: 76  LLPREYYEATGRWTEYGDTLFRLQD-----RKGADYLLGPTHEEMFTDMVKGEYSSYKDY 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKD 417
           PV L +  + YR+E      G++R R F   D++ F   +       + H    I  +  
Sbjct: 131 PVTLYQIQTKYRDEARPR-AGILRGREFVMKDSYSFDLDDDGLKRSYEQHRETYIRTFDR 189

Query: 418 FGFEKIMVKLSTRPEKRVGSDAL 440
            G    +   ++       S+  
Sbjct: 190 LGISYKICFATSGAMGGSASEEF 212



 Score = 78.7 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 28/165 (16%), Positives = 64/165 (38%), Gaps = 12/165 (7%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFK 543
           +I R  + G I Q+            +    +   P+ +    +G  + R + ++ E   
Sbjct: 415 SIDRGIEIGHIFQLGRKYADAAKLDALGPDGK---PIRVTMGSYGVGVSRAVAVLAEQRH 471

Query: 544 GNLPL-WL---SPIQAIVTTIT-SSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIRE 597
             L L W    +P+   V        +E A  +A  L++  L +  D R   +   K ++
Sbjct: 472 DELGLVWPREVAPVDVHVVGTGKDGQIEAANRLAEDLQARGLRVLVDDRAGVSPGVKFKD 531

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             +  +P I+I G +  ++    +R   +   +++ + +A   + 
Sbjct: 532 AELLGMPTILIIG-RGLAQGVAELRDRVTGVKEEIPIDEAADRVV 575


>gi|229013002|ref|ZP_04170167.1| Prolyl-tRNA synthetase [Bacillus mycoides DSM 2048]
 gi|228748256|gb|EEL98116.1| Prolyl-tRNA synthetase [Bacillus mycoides DSM 2048]
          Length = 566

 Score =  135 bits (339), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 88/203 (43%), Gaps = 11/203 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R +++     E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K      ++ R FAL   +      +    +KSY++L
Sbjct: 74  MQASELWQESGRWYSYGSELMRMKD-----RNAREFALGATHEEVITDLVRDEIKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKD 417
           P+ L +  + +R+E      GL+R R F   DA+ F  T+E +      ++    +I+  
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEVYSGLYKAYSNIFAR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDAL 440
            G     V   +       +   
Sbjct: 188 CGLNFRAVIADSGAMGGKDTHEF 210



 Score = 77.5 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 60/157 (38%), Gaps = 11/157 (7%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G +  +        NA +++ +  K  P+++     G   R +  + E F     
Sbjct: 404 RGIEVGHVFKLGTRYSEAMNATFLDENG-KTKPLIMGCYGIGVS-RTVAAIAEQFNDENG 461

Query: 546 --LPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              P  ++P    V  +   + +  E    I N L+     +  D R E    K  +  +
Sbjct: 462 LVWPKSVAPFHVHVIPVNMKSDAQREMGGNIYNSLQEQGYEVLLDDRAERAGVKFADADL 521

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
             +P+ +  G K A E  + ++   +  +++V + + 
Sbjct: 522 FGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEEL 557


>gi|332184487|gb|AEE26741.1| Prolyl-tRNA synthetase Bacterial type [Francisella cf. novicida
           3523]
          Length = 565

 Score =  135 bits (339), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 50/257 (19%), Positives = 93/257 (36%), Gaps = 27/257 (10%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            TQ  +       +E+    H+ + +   +  +A   SG+  W   G K+ Q +   +R 
Sbjct: 3   ATQTLIATTKELPKEAVLISHQYMLKAGLIKKLA---SGIYTWMPLGLKVLQKIQDIVRD 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P +L   L Q++  WD +   +  ++      +  R F   P +    
Sbjct: 60  EMNKAGASELLLPSILPSELLQETHRWDKFGPELLKLRD-----RHNRDFCYGPTHEEPI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           V +    +KSY++LP+ L +  + +R+E      G+MR R F   DA+ F    Q     
Sbjct: 115 VDMARDTIKSYKQLPLNLYQIQTKFRDEIRPRF-GVMRAREFIMKDAYSFHENSQCLRNT 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++    +I    G     VK  T       S         ++    + I        
Sbjct: 174 YNIMYTTYCNILDKIGLAYRPVKADTGAIGGDNSHEF-----QVLANAGEDI-------- 220

Query: 464 NTGVLLGEGAFYGPKFE 480
              +    G+ Y    E
Sbjct: 221 ---ICYSNGSDYAANIE 234



 Score = 86.8 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 23/152 (15%), Positives = 57/152 (37%), Gaps = 8/152 (5%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL---SPIQ 554
           ++       NA  ++    K  P+++    FG        + ++   N  +W    +P Q
Sbjct: 415 LEDVYSKPMNANIIDQDG-KSKPMLMGCYGFGVSRVMAAAIEQSHDQNGIIWPEAIAPYQ 473

Query: 555 AIVTTITSSAVEYAQEIANLLKS----HHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
             +  I  +  +  +E+A+ L      + + +  D R         +  +      ++ G
Sbjct: 474 VAILPINYNKSDKVKEVADKLYQDLLTNGIDVLLDDRGARPGVMFADADLIGYSHHVVIG 533

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           D+   +  I  +   +   Q++++ + I IL 
Sbjct: 534 DRLLEQGLIEYKNRKTQEKQEITVTELIEILK 565


>gi|330723868|gb|AEC46238.1| prolyl-tRNA synthetase [Mycoplasma hyorhinis MCLD]
          Length = 480

 Score =  135 bits (339), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 64/422 (15%), Positives = 150/422 (35%), Gaps = 61/422 (14%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINT 296
             E   R +  + ++ + F       G I++    + +++ +   + +   +++ + +  
Sbjct: 10  WNEDFSRWYVDVVKQAE-FMEYGPIKGTIYFKPNSFALWEKIQENLNKYFKRENVKNVYF 68

Query: 297 PQVLDQHL-WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P ++ Q    ++  H + +   +  +  A +  K      ++P +       F   L + 
Sbjct: 69  PLLIPQSFITKEKSHVEGFAPELLTITHAGEK-KLSEELYVRPTSEVLFADCFKKELANN 127

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT-KEQMFNECLKIHNLIISI 414
            +LP+   ++ SV R E   + +  +R   F   + H   +  E+      K+  +    
Sbjct: 128 NQLPLIYNQWTSVLRWEK--NTNPFLRTTEFLWQEGHTVHSNAEEAKRLAKKMIGIYKDF 185

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            +++    +++   T  E+  G++  +                                 
Sbjct: 186 IENYLAIPVIIGNKTERERFAGAEQTY--------------------------------- 212

Query: 475 YGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
                E ++KD  G+  Q GT      N    F+  + N  +E  +P   ++  +G   R
Sbjct: 213 ---TVEAMMKD--GKALQSGTSHYLAQNFSKSFDIVFKNDKNEFENP---YQTSWGVSTR 264

Query: 534 FIGIMIENFKGN----LPLWLSPIQAIVT----TITSSAVEYAQEIANLLKSHHLSIETD 585
            IG +I     +    LP  ++PIQ  +              A++I   LK    ++  D
Sbjct: 265 LIGGLIMTHGDDRGVILPPKIAPIQVDILELFAIKNPIVSIVAKQIFEKLKIK-FTLRID 323

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL---DAIPILT 642
             +    YK     +   P+ I  G ++  +  + I R  +    +V +    + +  L 
Sbjct: 324 STDNQPGYKASRSEVLGTPLRIEVGPRDLEKNQVAIVRRDTLEKHQVEVEKVFEKVEFLL 383

Query: 643 KE 644
           +E
Sbjct: 384 EE 385


>gi|282889555|ref|ZP_06298097.1| hypothetical protein pah_c001o032 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281500568|gb|EFB42845.1| hypothetical protein pah_c001o032 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 505

 Score =  135 bits (339), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 73/443 (16%), Positives = 151/443 (34%), Gaps = 74/443 (16%)

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK 288
           QE        EE+    ++++ +  DL   +     ++     G+ I++ +  Y+ +KIK
Sbjct: 3   QEKNAISPTREENYPEWYQQVVKAADLAENSPVRGCMVI-KPWGYGIWENMQKYLDQKIK 61

Query: 289 D-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDL---------RTFALK 337
              +E    P  +     + ++ H + +      V       ++              ++
Sbjct: 62  STGHENAYFPLFIPLSFLEKEAAHVEGFAKECAVVTHHRLEERNGKLIPTGELEEPLIVR 121

Query: 338 PMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-T 396
           P +       F+  ++SYR+LP+ + ++ +V R E        +R   F   + H    +
Sbjct: 122 PTSETIIGESFSRWVESYRDLPLLINQWANVVRWEMRP--RIFLRTAEFLWQEGHTVHAS 179

Query: 397 KEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIK 456
            E+ F E LK+  +     ++     ++    +  E+                       
Sbjct: 180 SEEAFEETLKMLEVYREFVENILAIPVITGEKSPGERF---------------------- 217

Query: 457 NSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHS 515
                          GA      E +++D   +  Q GT   +  N     N  + N   
Sbjct: 218 --------------PGAVSTYTIEMMVQDR--KALQGGTSHFLGQNFAKASNIRFSNKDG 261

Query: 516 EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTTITSS------AV 565
           E  +    H   +G   R IG +I     +  + L P     Q ++  I          +
Sbjct: 262 ETEYG---HTTSWGITTRLIGALIMTHGDDDGIRLPPKIAHRQVVILPIMPKPEHEAAVL 318

Query: 566 EYAQEIANLLKS-----HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
             A+++A  L+S       +S+  D R+     K  E   K +PI I  G ++   + + 
Sbjct: 319 GQAEKVAQELRSSTFNGQPISVHVDKRDLRGGEKNWEWIKKGVPIRIEIGPRDVENQVVT 378

Query: 621 IRRFGS--TTTQKVSLLDAIPIL 641
           + R      T   + + +    L
Sbjct: 379 LCRRDQPHKTKITIPVAELSQKL 401


>gi|222097264|ref|YP_002531321.1| prolyl-tRNA synthetase [Bacillus cereus Q1]
 gi|254782885|sp|B9IVA8|SYP_BACCQ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|221241322|gb|ACM14032.1| prolyl-tRNA synthetase [Bacillus cereus Q1]
          Length = 566

 Score =  135 bits (339), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 89/203 (43%), Gaps = 11/203 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R +++     E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K      ++ R FAL   +      +    +KSY++L
Sbjct: 74  MQAAELWQESGRWYSYGSELMRMKD-----RNAREFALGATHEEVITDLVRDEVKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKD 417
           P+ L +  + +R+E      GL+R R F   DA+ F  T+E +     +++    +I+  
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEVYDRLYKAYSNIFAR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDAL 440
            G     V   +       +   
Sbjct: 188 CGLNFRAVIADSGAMGGKDTHEF 210



 Score = 79.1 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 61/157 (38%), Gaps = 11/157 (7%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G +  +        NA +++ +  K  P+++     G   R +  + E F     
Sbjct: 404 RGIEVGHVFKLGTRYSEAMNATFLDENG-KTQPLIMGCYGIGVS-RTVAAIAEQFNDENG 461

Query: 546 --LPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              P  ++P    V  +   + +  E  + I N L+     +  D R E    K  +  +
Sbjct: 462 LVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERAGVKFADADL 521

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
             +P+ +  G K A E  + ++   +  +++V + + 
Sbjct: 522 FGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEEL 557


>gi|49481697|ref|YP_037880.1| prolyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|81395110|sp|Q6HEZ6|SYP1_BACHK RecName: Full=Prolyl-tRNA synthetase 1; AltName: Full=Proline--tRNA
           ligase 1; Short=ProRS 1
 gi|49333253|gb|AAT63899.1| proline--tRNA ligase (prolyl-tRNA synthetase) [Bacillus
           thuringiensis serovar konkukian str. 97-27]
          Length = 566

 Score =  135 bits (339), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 89/203 (43%), Gaps = 11/203 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R +++     E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K      ++ R FAL   +      +    +KSY++L
Sbjct: 74  MQAAELWQESGRWYSYGSELMRMKD-----RNAREFALGATHEEVITDLVRDEVKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKD 417
           P+ L +  + +R+E      GL+R R F   DA+ F  T+E +     +++    +I+  
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEVYDRLYKAYSNIFAR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDAL 440
            G     V   +       +   
Sbjct: 188 CGLNFRAVIADSGAMGGKDTHEF 210



 Score = 79.1 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 61/157 (38%), Gaps = 11/157 (7%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G +  +        NA +++ +  K  P+++     G   R +  + E F     
Sbjct: 404 RGIEVGHVFKLGTRYSEAMNATFLDENG-KTQPLIMGCYGIGVS-RTVAAIAEQFNDENG 461

Query: 546 --LPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              P  ++P    V  +   + +  E  + I N L+     +  D R E    K  +  +
Sbjct: 462 LVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERAGVKFADADL 521

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
             +P+ +  G K A E  + ++   +  +++V + + 
Sbjct: 522 FGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEEL 557


>gi|52141669|ref|YP_085160.1| prolyl-tRNA synthetase [Bacillus cereus E33L]
 gi|81686584|sp|Q636K7|SYP1_BACCZ RecName: Full=Prolyl-tRNA synthetase 1; AltName: Full=Proline--tRNA
           ligase 1; Short=ProRS 1
 gi|51975138|gb|AAU16688.1| proline--tRNA ligase (prolyl-tRNA synthetase) [Bacillus cereus
           E33L]
          Length = 566

 Score =  135 bits (339), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 89/203 (43%), Gaps = 11/203 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R +++     E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K      ++ R FAL   +      +    +KSY++L
Sbjct: 74  MQAAELWQESGRWYSYGSELMRMKD-----RNAREFALGATHEEVITDLVRDEVKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKD 417
           P+ L +  + +R+E      GL+R R F   DA+ F  T+E +     +++    +I+  
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEVYDRLYKAYSNIFAR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDAL 440
            G     V   +       +   
Sbjct: 188 CGLNFRAVIADSGAMGGKDTHEF 210



 Score = 78.7 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 26/157 (16%), Positives = 61/157 (38%), Gaps = 11/157 (7%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G +  +        NA +++ +  K  P+++     G   R +  + E F     
Sbjct: 404 RGIEVGHVFKLGTRYSEAMNATFLDENG-KTQPLIMGCYGIGVS-RTVAAIAEQFNDENG 461

Query: 546 --LPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              P  ++P    V  +   + +  E  + I N L+     +  D R E    K  +  +
Sbjct: 462 LVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERAGVKFADADL 521

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
             +P+ +  G K A E  + ++   +  ++++ + + 
Sbjct: 522 FGLPVRVTVGKK-ADEGIVEVKVRATGESEEIKVEEL 557


>gi|258452562|ref|ZP_05700568.1| prolyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|257859780|gb|EEV82622.1| prolyl-tRNA synthetase [Staphylococcus aureus A5948]
          Length = 567

 Score =  135 bits (339), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 47/252 (18%), Positives = 103/252 (40%), Gaps = 14/252 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        E+E + HR L +      I +  SG+  +     ++   + + +R++
Sbjct: 4   SKVFIPTMRDVPSEAEAQSHRLLLKSG---LIKQSTSGIYSYLPLATRVLNNITAIVRQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++  D  EI  P +    LW++SG W +Y   +  ++      +  R FAL P +     
Sbjct: 61  MERIDSVEILMPALQQAELWEESGRWGAYGPELMRLQD-----RHGRQFALGPTHEELVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           ++  + LKSY++LP+ L +  S +R+E      GL+R R F   DA+ F   E   ++  
Sbjct: 116 SIVRNELKSYKQLPMTLFQIQSKFRDEKRPRF-GLLRGREFIMKDAYSFHADEASLDQTY 174

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA---ENIMKGVLDTIKNSSQD 461
           + ++     I++  G     V   +       +      +   E+ +    ++   ++ +
Sbjct: 175 QDMYQAYSRIFERVGINARPVVADSGAIGGSHTHEFMALSAIGEDTIVYSKESDYAANIE 234

Query: 462 RINTGVLLGEGA 473
           +           
Sbjct: 235 KAEVVYEPNHKH 246



 Score = 68.7 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 23/152 (15%), Positives = 56/152 (36%), Gaps = 9/152 (5%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI- 556
           +        NA ++++   K   +++     G       I+ +N   N  +W   +    
Sbjct: 413 LGTKYSESMNATFLDNQG-KAQSLIMGCYGIGISRTLSAIVEQNHDDNGIVWPKSVTPFD 471

Query: 557 -----VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
                +        E A  +     +    +  D R E    K  +  +  +P+ I+ G 
Sbjct: 472 LHLISINPKKDDQRELADALYAEFNTK-FDVLYDDRQERAGVKFNDADLIGLPLRIVVGK 530

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           + ASE  + ++   +  +++V + D + ++T 
Sbjct: 531 R-ASEGIVEVKERLTGDSEEVHIDDLMTVITN 561


>gi|50954884|ref|YP_062172.1| prolyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07]
 gi|81826655|sp|Q6AEX8|SYP_LEIXX RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|50951366|gb|AAT89067.1| prolyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07]
          Length = 590

 Score =  135 bits (339), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 42/216 (19%), Positives = 82/216 (37%), Gaps = 11/216 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           T   L        ++E   HR L R   +        GV  W   G ++   +   +R +
Sbjct: 6   TNYFLRTLREDPADAEVTSHRLLVRAGYIR---RQAPGVFAWLPLGLRVKAKIERIIREE 62

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E++ P +L +  ++ +G W+ Y   +F +K      +    + L P +     
Sbjct: 63  LAAAGAHEVHFPALLPREPYEITGRWEEYGDALFHLKD-----RKGADYLLAPTHEEAFT 117

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +      SY++LP+ + +    YR+E      GL+R R FT  DA+ F   +   +   
Sbjct: 118 LLVKDLYSSYKDLPLTIFQIQDKYRDEARPR-AGLLRGREFTMKDAYSFDATDAGLDVSY 176

Query: 406 KIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           +        I+   G + ++V+          S+  
Sbjct: 177 QAQRDAYERIFARLGLDFVIVQADAGAMGGSRSEEF 212



 Score = 79.4 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/240 (14%), Positives = 79/240 (32%), Gaps = 32/240 (13%)

Query: 432 EKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN---------TGVLLGEGAFYGPKFEY- 481
               G   L ++A   ++ ++D         I           G++ G    +    E  
Sbjct: 351 PWSAGGPVLGEEAATGLRFLVDLRVVDGSGWITGANLPGKHVFGLVAGRDFDWDGTVEVA 410

Query: 482 ------ILKDAIG-----RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG 529
                    D  G     R  + G + Q+            ++ + +     M    +  
Sbjct: 411 EVKAGDPAPDGSGPVELARGMEIGHVFQLGRKYADALGLTVLDENGKLVTVTMGSYGI-- 468

Query: 530 SIERFIGIMIE----NFKGNLPLWLSPIQAIVTTITSSAVEY--AQEIANLLKSHHLSIE 583
            + R + I+ E    +     P  ++P    V       V +  A++    L++  L + 
Sbjct: 469 GVTRILAIIAEENNDDKGLVWPEAVAPFDVHVVAAGREQVAFDVAEQAVAQLEAVGLDVL 528

Query: 584 TDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            D R + +   K  +  +  +P +++ G + A++  + +          + L +A+  LT
Sbjct: 529 YDDRPKVSPGVKFGDAELIGVPRVLVVG-RGAAQGEVELWDRRGGNHTTLPLSEAVAALT 587


>gi|229197929|ref|ZP_04324645.1| Prolyl-tRNA synthetase [Bacillus cereus m1293]
 gi|228585647|gb|EEK43749.1| Prolyl-tRNA synthetase [Bacillus cereus m1293]
          Length = 566

 Score =  135 bits (339), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 89/203 (43%), Gaps = 11/203 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R +++     E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K      ++ R FAL   +      +    +KSY++L
Sbjct: 74  MQAAELWQESGRWYSYGSELMRMKD-----RNAREFALGATHEEVITDLVRDEVKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKD 417
           P+ L +  + +R+E      GL+R R F   DA+ F  T+E +     +++    +I+  
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEVYDRLYKAYSNIFAR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDAL 440
            G     V   +       +   
Sbjct: 188 CGLNFRAVIADSGAMGGKDTHEF 210



 Score = 79.1 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 61/157 (38%), Gaps = 11/157 (7%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G +  +        NA +++ +  K  P+++     G   R +  + E F     
Sbjct: 404 RGIEVGHVFKLGTRYSEAMNATFLDENG-KTQPLIMGCYGIGVS-RTVAAIAEQFNDENG 461

Query: 546 --LPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              P  ++P    V  +   + +  E  + I N L+     +  D R E    K  +  +
Sbjct: 462 LVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERAGVKFADADL 521

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
             +P+ +  G K A E  + ++   +  +++V + + 
Sbjct: 522 FGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEEL 557


>gi|34496029|ref|NP_900244.1| prolyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472]
 gi|81834766|sp|Q7P0J3|SYP_CHRVO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|34101883|gb|AAQ58250.1| prolyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472]
          Length = 568

 Score =  135 bits (339), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 48/248 (19%), Positives = 91/248 (36%), Gaps = 10/248 (4%)

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLF--HIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
              +Q+     +    D    ++++ +    I +  +G+  W   G ++ + + + +R +
Sbjct: 1   MRASQFFISTLKEAPADADITSQKLMIRAGFIRKQAAGIYSWMPMGLRVVRKVETIIREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E++ P V    LWQ++G WD+  A +   K      +  R FAL+P       
Sbjct: 61  MNRAGGIEVSLPVVQPAELWQETGRWDAMGAELLRFKD-----RHERDFALQPTAEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT-KEQMFNEC 404
            +    L+SYR LP    +  + +R+E      G+MR R FT  DA+ F    E      
Sbjct: 116 DIARRELRSYRALPKNFYQIQTKFRDERRPRF-GVMRGREFTMKDAYSFDRSAEDAGKSY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
             ++     I+   G     V   T       S      A+     ++    +     I 
Sbjct: 175 DNMYAAYRRIFDRLGLTYRAVAADTGAIGGDRSHEFQVIADTGEDAIVYCPTSEYAANIE 234

Query: 465 TGVLLGEG 472
               +   
Sbjct: 235 LAEAVAPA 242



 Score = 79.4 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 28/174 (16%), Positives = 62/174 (35%), Gaps = 11/174 (6%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           P  +     AI R  + G +  +     +  NA +++   +   P  +     G   R +
Sbjct: 392 PSPDGQGALAIQRGIEVGHVFYLGTKYSAAMNATFLDEDGKPK-PFEMGCYGIGVT-RIL 449

Query: 536 GIMIE-NFKGNLPLWL---SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFR 587
           G  IE N+     +W    +P   +V  +    + +  E A ++   L++  + +  D R
Sbjct: 450 GAAIEQNYDDKGMIWPDSIAPFAVVVCPVGYDRSEAVKEAADKLYADLQARGVDVMLDDR 509

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            E       +  +   P  +  GD+   E  +  +    +    V+    +  +
Sbjct: 510 GERPGAMFADWELIGAPHRVTIGDRGLKEGKVEYQHRRDSEATAVAADAILEHV 563


>gi|57651833|ref|YP_186139.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
 gi|81175020|sp|Q5HGG8|SYP_STAAC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|57286019|gb|AAW38113.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
          Length = 567

 Score =  135 bits (339), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 47/252 (18%), Positives = 103/252 (40%), Gaps = 14/252 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        E+E + HR L +      I +  SG+  +     ++   + + +R++
Sbjct: 4   SKVFIPTMRDVPSEAEAQSHRLLLKSG---LIKQSTSGIYSYLPLATRVLNNITAIVRQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++  D  EI  P +    LW++SG W +Y   +  ++      +  R FAL P +     
Sbjct: 61  MERIDSVEILMPALQQAELWEESGRWGAYGPELMRLQD-----RHGRQFALGPTHEELVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           ++  + LKSY++LP+ L +  S +R+E      GL+R R F   DA+ F   E   ++  
Sbjct: 116 SIVRNELKSYKQLPMTLFQIQSKFRDEKRPRF-GLLRGREFIMKDAYSFHADEASLDQTY 174

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA---ENIMKGVLDTIKNSSQD 461
           + ++     I++  G     V   +       +      +   E+ +    ++   ++ +
Sbjct: 175 QDMYQAYSRIFERVGINARPVVADSGAIGGSHTHEFMALSAIGEDTIVYSKESDYAANIE 234

Query: 462 RINTGVLLGEGA 473
           +           
Sbjct: 235 KAEVVYEPNHKH 246



 Score = 68.7 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 23/152 (15%), Positives = 56/152 (36%), Gaps = 9/152 (5%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI- 556
           +        NA ++++   K   +++     G       I+ +N   N  +W   +    
Sbjct: 413 LGTKYSESMNATFLDNQG-KAQSLIMGCYGIGISRTLSAIVEQNHDDNGIVWPKSVTPFD 471

Query: 557 -----VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
                +        E A  +     +    +  D R E    K  +  +  +P+ I+ G 
Sbjct: 472 LHLISINPKKDDQRELADALYAEFNTK-FDVLYDDRQERAGVKFNDADLIGLPLRIVVGK 530

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           + ASE  + ++   +  +++V + D + ++T 
Sbjct: 531 R-ASEGIVEVKERLTGDSEEVHIDDLMTVITN 561


>gi|298694555|gb|ADI97777.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED133]
          Length = 567

 Score =  135 bits (339), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 47/252 (18%), Positives = 103/252 (40%), Gaps = 14/252 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        E+E + HR L +      I +  SG+  +     ++   + + +R++
Sbjct: 4   SKVFIPTMRDVPSEAEAQSHRLLLKSG---LIKQSTSGIYSYLPLATRVLNNITAIVRQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++  D  EI  P +    LW++SG W +Y   +  ++      +  R FAL P +     
Sbjct: 61  MERIDSVEILMPALQQAELWEESGRWGAYGPELMRLQD-----RHGRQFALGPTHEELVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           ++  + LKSY++LP+ L +  S +R+E      GL+R R F   DA+ F   E   ++  
Sbjct: 116 SIVRNELKSYKQLPMTLFQIQSKFRDEKRPRF-GLLRGREFIMKDAYSFHADEASLDQTY 174

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA---ENIMKGVLDTIKNSSQD 461
           + ++     I++  G     V   +       +      +   E+ +    ++   ++ +
Sbjct: 175 QDMYQAYSRIFERVGINARPVVADSGAIGGSHTHEFMALSAIGEDTIVYSKESDYAANIE 234

Query: 462 RINTGVLLGEGA 473
           +           
Sbjct: 235 KAEVVYEPNHKH 246



 Score = 72.1 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 24/152 (15%), Positives = 57/152 (37%), Gaps = 9/152 (5%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI- 556
           +        NA ++++   K  P+++     G       I+ +N   N  +W   +    
Sbjct: 413 LGTKYSESMNATFLDNQG-KAQPLIMGCYGIGISRTLSAIVEQNHDDNGIVWPKSVTPFD 471

Query: 557 -----VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
                +        E A  +     +    +  D R E    K  +  +  +P+ I+ G 
Sbjct: 472 LHLISINPKKDDQRELADALYAEFNTK-FDVLYDDRQERAGVKFNDADLIGLPLRIVVGK 530

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           + ASE  + ++   +  +++V + D + ++T 
Sbjct: 531 R-ASEGIVEVKERLTGDSEEVHIDDLMTVITN 561


>gi|229134626|ref|ZP_04263436.1| Prolyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
 gi|228648887|gb|EEL04912.1| Prolyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
          Length = 566

 Score =  135 bits (339), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 88/203 (43%), Gaps = 11/203 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R +++     E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K      ++ R FAL   +      +    +KSY++L
Sbjct: 74  MQASELWQESGRWYSYGSELMRMKD-----RNAREFALGATHEEVITDLVRDEIKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKD 417
           P+ L +  + +R+E      GL+R R F   DA+ F  T+E +      ++    +I+  
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEVYSGLYKAYSNIFAR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDAL 440
            G     V   +       +   
Sbjct: 188 CGLNFRAVIADSGAMGGKDTHEF 210



 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 61/157 (38%), Gaps = 11/157 (7%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G +  +        NA +++ +  K  P+++     G   R +  + E F     
Sbjct: 404 RGIEVGHVFKLGTRYSEAMNATFLDENG-KTKPLIMGCYGIGVS-RTVAAIAEQFNDENG 461

Query: 546 --LPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              P  ++P    V  +   + +  E  + I N L+     +  D R E    K  +  +
Sbjct: 462 LVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERAGVKFADADL 521

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
             +P+ +  G K A E  + ++   +  +++V + + 
Sbjct: 522 FGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEEL 557


>gi|87161679|ref|YP_493853.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|88194973|ref|YP_499773.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|151221385|ref|YP_001332207.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|161509429|ref|YP_001575088.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|221142497|ref|ZP_03566990.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           JKD6009]
 gi|262048155|ref|ZP_06021042.1| prolyl-tRNA synthetase [Staphylococcus aureus D30]
 gi|262051325|ref|ZP_06023548.1| prolyl-tRNA synthetase [Staphylococcus aureus 930918-3]
 gi|282920507|ref|ZP_06328228.1| prolyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|284024256|ref|ZP_06378654.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 132]
 gi|294848259|ref|ZP_06789006.1| prolyl-tRNA synthetase [Staphylococcus aureus A9754]
 gi|304381173|ref|ZP_07363826.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|114152254|sp|Q2FHH5|SYP_STAA3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|114152255|sp|Q2G1Z4|SYP_STAA8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|172049021|sp|A6QGG3|SYP_STAAE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|189083518|sp|A8Z3U3|SYP_STAAT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|87127653|gb|ABD22167.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87202531|gb|ABD30341.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|150374185|dbj|BAF67445.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|160368238|gb|ABX29209.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|259160700|gb|EEW45721.1| prolyl-tRNA synthetase [Staphylococcus aureus 930918-3]
 gi|259163721|gb|EEW48276.1| prolyl-tRNA synthetase [Staphylococcus aureus D30]
 gi|282594169|gb|EFB99156.1| prolyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|294825059|gb|EFG41481.1| prolyl-tRNA synthetase [Staphylococcus aureus A9754]
 gi|302751086|gb|ADL65263.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           JKD6008]
 gi|304340156|gb|EFM06097.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|315198505|gb|EFU28834.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS01]
 gi|320140920|gb|EFW32767.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA131]
 gi|320144364|gb|EFW36130.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA177]
 gi|329313933|gb|AEB88346.1| Prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus T0131]
 gi|329727831|gb|EGG64282.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus 21189]
          Length = 567

 Score =  135 bits (339), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 47/252 (18%), Positives = 103/252 (40%), Gaps = 14/252 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        E+E + HR L +      I +  SG+  +     ++   + + +R++
Sbjct: 4   SKVFIPTMRDVPSEAEAQSHRLLLKSG---LIKQSTSGIYSYLPLATRVLNNITAIVRQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++  D  EI  P +    LW++SG W +Y   +  ++      +  R FAL P +     
Sbjct: 61  MERIDSVEILMPALQQAELWEESGRWGAYGPELMRLQD-----RHGRQFALGPTHEELVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           ++  + LKSY++LP+ L +  S +R+E      GL+R R F   DA+ F   E   ++  
Sbjct: 116 SIVRNELKSYKQLPMTLFQIQSKFRDEKRPRF-GLLRGREFIMKDAYSFHADEASLDQTY 174

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA---ENIMKGVLDTIKNSSQD 461
           + ++     I++  G     V   +       +      +   E+ +    ++   ++ +
Sbjct: 175 QDMYQAYSRIFERVGINARPVVADSGAIGGSHTHEFMALSAIGEDTIVYSKESDYAANIE 234

Query: 462 RINTGVLLGEGA 473
           +           
Sbjct: 235 KAEVVYEPNHKH 246



 Score = 68.7 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 23/152 (15%), Positives = 56/152 (36%), Gaps = 9/152 (5%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI- 556
           +        NA ++++   K   +++     G       I+ +N   N  +W   +    
Sbjct: 413 LGTKYSESMNATFLDNQG-KAQSLIMGCYGIGISRTLSAIVEQNHDDNGIVWPKSVTPFD 471

Query: 557 -----VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
                +        E A  +     +    +  D R E    K  +  +  +P+ I+ G 
Sbjct: 472 LHLISINPKKDDQRELADALYAEFNTK-FDVLYDDRQERAGVKFNDADLIGLPLRIVVGK 530

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           + ASE  + ++   +  +++V + D + ++T 
Sbjct: 531 R-ASEGIVEVKERLTGDSEEVHIDDLMTVITN 561


>gi|15924253|ref|NP_371787.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50]
 gi|15926846|ref|NP_374379.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus N315]
 gi|21282875|ref|NP_645963.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
 gi|148267753|ref|YP_001246696.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|150393812|ref|YP_001316487.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|156979584|ref|YP_001441843.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
 gi|253315619|ref|ZP_04838832.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           CF-Marseille]
 gi|253733499|ref|ZP_04867664.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TCH130]
 gi|255006050|ref|ZP_05144651.2| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Mu50-omega]
 gi|257795681|ref|ZP_05644660.1| prolyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|258416084|ref|ZP_05682352.1| prolyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|258421667|ref|ZP_05684591.1| prolyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|258434823|ref|ZP_05688897.1| prolyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|258444601|ref|ZP_05692930.1| prolyl-tRNA synthetase [Staphylococcus aureus A8115]
 gi|258447566|ref|ZP_05695710.1| prolyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|258449408|ref|ZP_05697511.1| prolyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|258454787|ref|ZP_05702751.1| prolyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|269202880|ref|YP_003282149.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98]
 gi|282892751|ref|ZP_06300986.1| prolyl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|295406200|ref|ZP_06816007.1| prolyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|296274821|ref|ZP_06857328.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MR1]
 gi|297208091|ref|ZP_06924522.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|297244428|ref|ZP_06928311.1| prolyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|300912172|ref|ZP_07129615.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
 gi|81175021|sp|Q99UK9|SYP_STAAM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|81175022|sp|Q7A5Y3|SYP_STAAN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|81175025|sp|Q7A120|SYP_STAAW RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|166980161|sp|A7X1P3|SYP_STAA1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|189083516|sp|A6U182|SYP_STAA2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|189083517|sp|A5ISE7|SYP_STAA9 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|13701063|dbj|BAB42358.1| proline-tRNA ligase [Staphylococcus aureus subsp. aureus N315]
 gi|14247033|dbj|BAB57425.1| proline-tRNA ligase [Staphylococcus aureus subsp. aureus Mu50]
 gi|21204314|dbj|BAB95011.1| proline-tRNA ligase [Staphylococcus aureus subsp. aureus MW2]
 gi|147740822|gb|ABQ49120.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|149946264|gb|ABR52200.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|156721719|dbj|BAF78136.1| proline-tRNA ligase [Staphylococcus aureus subsp. aureus Mu3]
 gi|253728553|gb|EES97282.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TCH130]
 gi|257789653|gb|EEV27993.1| prolyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|257839232|gb|EEV63708.1| prolyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|257842353|gb|EEV66778.1| prolyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|257849184|gb|EEV73166.1| prolyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|257850094|gb|EEV74047.1| prolyl-tRNA synthetase [Staphylococcus aureus A8115]
 gi|257853757|gb|EEV76716.1| prolyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|257857396|gb|EEV80294.1| prolyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|257863170|gb|EEV85934.1| prolyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|262075170|gb|ACY11143.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98]
 gi|282764748|gb|EFC04873.1| prolyl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|285816945|gb|ADC37432.1| Prolyl-tRNA synthetase [Staphylococcus aureus 04-02981]
 gi|294968788|gb|EFG44810.1| prolyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|296887334|gb|EFH26236.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|297178458|gb|EFH37704.1| prolyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|300886418|gb|EFK81620.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
 gi|312829657|emb|CBX34499.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ECT-R
           2]
 gi|315131057|gb|EFT87041.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS03]
 gi|329727670|gb|EGG64126.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus 21172]
          Length = 567

 Score =  135 bits (339), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 47/252 (18%), Positives = 103/252 (40%), Gaps = 14/252 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        E+E + HR L +      I +  SG+  +     ++   + + +R++
Sbjct: 4   SKVFIPTMRDVPSEAEAQSHRLLLKSG---LIKQSTSGIYSYLPLATRVLNNITAIVRQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++  D  EI  P +    LW++SG W +Y   +  ++      +  R FAL P +     
Sbjct: 61  MERIDSVEILMPALQQAELWEESGRWGAYGPELMRLQD-----RHGRQFALGPTHEELVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           ++  + LKSY++LP+ L +  S +R+E      GL+R R F   DA+ F   E   ++  
Sbjct: 116 SIVRNELKSYKQLPMTLFQIQSKFRDEKRPRF-GLLRGREFIMKDAYSFHADEASLDQTY 174

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA---ENIMKGVLDTIKNSSQD 461
           + ++     I++  G     V   +       +      +   E+ +    ++   ++ +
Sbjct: 175 QDMYQAYSRIFERVGINARPVVADSGAIGGSHTHEFMALSAIGEDTIVYSKESDYAANIE 234

Query: 462 RINTGVLLGEGA 473
           +           
Sbjct: 235 KAEVVYEPNHKH 246



 Score = 72.1 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 24/152 (15%), Positives = 57/152 (37%), Gaps = 9/152 (5%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI- 556
           +        NA ++++   K  P+++     G       I+ +N   N  +W   +    
Sbjct: 413 LGTKYSESMNATFLDNQG-KAQPLIMGCYGIGISRTLSAIVEQNHDDNGIVWPKSVTPFD 471

Query: 557 -----VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
                +        E A  +     +    +  D R E    K  +  +  +P+ I+ G 
Sbjct: 472 LHLISINPKKDDQRELADALYAEFNTK-FDVLYDDRQERAGVKFNDADLIGLPLRIVVGK 530

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           + ASE  + ++   +  +++V + D + ++T 
Sbjct: 531 R-ASEGIVEVKERLTGDSEEVHIDDLMTVITN 561


>gi|318041155|ref|ZP_07973111.1| prolyl-tRNA synthetase [Synechococcus sp. CB0101]
          Length = 609

 Score =  135 bits (339), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 52/207 (25%), Positives = 84/207 (40%), Gaps = 8/207 (3%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E   H+ L R   +  +   GSG+  +    W++ Q + + +R ++      E   PQ
Sbjct: 17  EAEIPSHKLLLRAGYIRRV---GSGIYAYLPLLWRVLQKISAIVREELNAAGALETLLPQ 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W  Y A    +   +D  +  R   L P +     A+    L+SYR+L
Sbjct: 74  LQPAELWQRSGRWAGYTAGEGIMFHLED--RQGRELGLGPTHEEVITALAGDLLRSYRQL 131

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH-NLIISIYKD 417
           PV L +  + +R+E      GLMR R F   DA+ F   E    +           I+  
Sbjct: 132 PVNLYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSFHADEACLKQTYAAMDQAYRRIFSR 190

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDA 444
            G   + V+  +       S      A
Sbjct: 191 CGLRAVAVEADSGAIGGSASQEFMVTA 217



 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 24/161 (14%), Positives = 59/161 (36%), Gaps = 9/161 (5%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I Q+     +   A + N   ++  P+ +     G        + ++   N  
Sbjct: 438 RGIEVGHIFQLGRKYSAALEATFTNEAGQEE-PLWMGCYGIGVSRLAQAAVEQHHDANGI 496

Query: 548 LWL---SPIQAIVT---TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            W    +P + IV       ++  E  +++    +   + +  D R E    K ++  + 
Sbjct: 497 CWPTAIAPFEVIVVIANVADAAQRELGEQLYAEFQVAGMDVLLDDRTERAGVKFKDADLL 556

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            IP  ++ G + A++  + + +        ++  D +  L 
Sbjct: 557 GIPWRVVVG-RGAADGKVELVQRAGGERSDLAAADVLAQLQ 596


>gi|229168558|ref|ZP_04296281.1| Prolyl-tRNA synthetase [Bacillus cereus AH621]
 gi|228614964|gb|EEK72066.1| Prolyl-tRNA synthetase [Bacillus cereus AH621]
          Length = 566

 Score =  135 bits (339), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 88/203 (43%), Gaps = 11/203 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R +++     E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K      ++ R FAL   +      +    +KSY++L
Sbjct: 74  MQASELWQESGRWYSYGSELMRMKD-----RNAREFALGATHEEVITDLVRDEIKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKD 417
           P+ L +  + +R+E      GL+R R F   DA+ F  T+E +      ++    +I+  
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEVYSGLYKAYSNIFAR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDAL 440
            G     V   +       +   
Sbjct: 188 CGLNFRAVIADSGAMGGKDTHEF 210



 Score = 79.4 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 61/157 (38%), Gaps = 11/157 (7%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G +  +        NA +++ +  K  P+++     G   R +  + E F     
Sbjct: 404 RGIEVGHVFKLGTRYSEAMNATFLDENG-KTKPLIMGCYGIGVS-RTVAAIAEQFNDENG 461

Query: 546 --LPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              P  ++P    V  +   + +  E  + I N L+     +  D R E    K  +  +
Sbjct: 462 LVWPKSVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERAGVKFADADL 521

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
             +P+ +  G K A E  + ++   +  +++V + + 
Sbjct: 522 FGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEEL 557


>gi|172059576|ref|YP_001807228.1| prolyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
 gi|226699123|sp|B1YSV1|SYP_BURA4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|171992093|gb|ACB63012.1| prolyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
          Length = 578

 Score =  135 bits (339), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 46/207 (22%), Positives = 84/207 (40%), Gaps = 11/207 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ + R   +  +A    G+  +   G +  + + + +R ++      E+  P 
Sbjct: 17  DAEIVSHKLMVRAGMIRRVA---GGIYNYLPVGLRSIRKVEAIVREEMNRAGAIELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    LWQ+SG W+ Y   +   K   D       F + P +      +  + +KSYR++
Sbjct: 74  VQPAELWQESGRWEQYGPELLRFKDRKDN-----DFVIGPTHEEVVTDIARNQIKSYRQM 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKD 417
           PV   +  + +R+E      G+MR R F   DA+ F       NE   K+++  + I+  
Sbjct: 129 PVNFYQIQTKFRDEIRPRF-GVMRGREFIMKDAYSFDKDTAGLNESYRKMYDAYVRIFTR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDA 444
            G E   V   +       S      A
Sbjct: 188 LGLEFRAVAADSGSIGGNFSHEFHVIA 214



 Score = 84.1 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 26/164 (15%), Positives = 61/164 (37%), Gaps = 11/164 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNL 546
           R  + G + Q+         A +++   +   P+++     G   R +G  IE NF    
Sbjct: 409 RGIEVGHVFQLGTKYSEAMGATFLDESGKPQ-PMLMGCYGVGVT-RILGAAIEQNFDDRG 466

Query: 547 PLWL---SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
            +W    +P + ++  +    +    E A ++   L +  + +  D R E       +  
Sbjct: 467 IIWPESIAPFEVVLCPMGYDRSDMVREAADKLYAELAAAGIDVILDDRGERPGVMFADWE 526

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  +P  ++ G++   E  I  +         +   +A   +T+
Sbjct: 527 LIGVPHRLVIGERGLKEGKIEYQGRRDAEATLLPADEAAATVTE 570


>gi|323441042|gb|EGA98749.1| prolyl-tRNA synthetase [Staphylococcus aureus O11]
 gi|323443911|gb|EGB01522.1| prolyl-tRNA synthetase [Staphylococcus aureus O46]
          Length = 567

 Score =  135 bits (339), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 47/252 (18%), Positives = 104/252 (41%), Gaps = 14/252 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        E+E + HR L +      I +  SG+  +     ++   + + +R++
Sbjct: 4   SKVFIPTMRDVPSEAEAQSHRLLLKSG---LIKQSTSGIYSYLPLATRVLNNITAIVRQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++  D  EI  P +    LW++SG W +Y   +  ++      +  R FAL P +     
Sbjct: 61  MERIDSVEILMPALQQAELWEESGRWGAYGPELMRLQD-----RHGRQFALGPTHEELVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           ++  + LKSY++LP+ L +  S +R+E      GL+R R F   DA+ F   E+  ++  
Sbjct: 116 SIVRNELKSYKQLPMTLFQIQSKFRDEKRPRF-GLLRGREFIMKDAYSFHADEESLDQTY 174

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA---ENIMKGVLDTIKNSSQD 461
           + ++     I++  G     V   +       +      +   E+ +    ++   ++ +
Sbjct: 175 QDMYQAYSRIFERVGINARPVVADSGAIGGSHTHEFMALSAIGEDTIVYSKESDYAANIE 234

Query: 462 RINTGVLLGEGA 473
           +           
Sbjct: 235 KAEVVYEPNHKH 246



 Score = 71.7 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 24/152 (15%), Positives = 57/152 (37%), Gaps = 9/152 (5%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI- 556
           +        NA ++++   K  P+++     G       I+ +N   N  +W   +    
Sbjct: 413 LGTKYSESMNATFLDNQG-KAQPLIMGCYGIGISRTLSAIVEQNHDDNGIVWPKSVTPFD 471

Query: 557 -----VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
                +        E A  +     +    +  D R E    K  +  +  +P+ I+ G 
Sbjct: 472 LHLISINPKKDDQRELADALYAEFNTK-FDVLYDDRQERAGVKFNDADLIGLPLRIVVGK 530

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           + ASE  + ++   +  +++V + D + ++T 
Sbjct: 531 R-ASEGIVEVKERLTGDSEEVHIDDLMTVITN 561


>gi|319948036|ref|ZP_08022210.1| prolyl-tRNA synthetase [Dietzia cinnamea P4]
 gi|319438275|gb|EFV93221.1| prolyl-tRNA synthetase [Dietzia cinnamea P4]
          Length = 581

 Score =  135 bits (339), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 41/204 (20%), Positives = 80/204 (39%), Gaps = 11/204 (5%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
            ++E   H+ L R   +  +A    GV  W   G +  + +   +R ++     +EI+ P
Sbjct: 18  SDAEVLSHKLLVRAGYIRRVA---PGVYSWLPLGLRTLRRVEQVVREEMDAFGAQEISLP 74

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +L +  ++ +G W  Y   +F +K      +      L P +             SY++
Sbjct: 75  ALLPREPYETTGRWTEYGPALFRLKD-----RKGNDMMLGPTHEELFTLTVQGEYSSYKD 129

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYK 416
           LPV L +  + YR+E      G++R R F   D++ F   +       + H      I+ 
Sbjct: 130 LPVTLYQIQTKYRDEERPR-AGILRGREFVMKDSYSFDVDDAGLGRSYRAHRDAYQRIFD 188

Query: 417 DFGFEKIMVKLSTRPEKRVGSDAL 440
             G E ++   ++       S+  
Sbjct: 189 RLGIEYVICAATSGAMGGSASEEF 212



 Score = 83.7 bits (205), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 25/174 (14%), Positives = 65/174 (37%), Gaps = 10/174 (5%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           P  +      + R  + G I Q+       F    +  + +     M    +   + R +
Sbjct: 407 PAPDGHGTLTLARGIEIGHIFQLGRKYTDAFGFDVLGENGKPARVTMGSYGI--GVSRLV 464

Query: 536 GIMIENFKGNLPL-WLSP-----IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE 589
            ++ E F  +  L W +      +  ++     +A++ A  +        L +  D R  
Sbjct: 465 AVLAEQFADDKGLVWPAEAAPADVHVVIANKDQAAIDGAATLVEAFDRARLEVLFDDRKA 524

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +   K ++  +  +P +++ G +  SE ++ +R   +    +V++  A   + +
Sbjct: 525 SPGVKFKDAELIGVPWVVVVG-RGWSEGTVELRHRATGDVTQVAVDGAAEEIIR 577


>gi|82750864|ref|YP_416605.1| prolyl-tRNA synthetase [Staphylococcus aureus RF122]
 gi|114152256|sp|Q2YXK5|SYP_STAAB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|82656395|emb|CAI80814.1| prolyl-tRNA synthetase [Staphylococcus aureus RF122]
          Length = 567

 Score =  135 bits (339), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 47/252 (18%), Positives = 103/252 (40%), Gaps = 14/252 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        E+E + HR L +      I +  SG+  +     ++   + + +R++
Sbjct: 4   SKVFIPTMRDVPSEAEAQSHRLLLKSG---LIKQSTSGIYSYLPLATRVLNNITAIVRQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++  D  EI  P +    LW++SG W +Y   +  ++      +  R FAL P +     
Sbjct: 61  MERIDSVEILMPALQQAELWEESGRWGAYGTELMRLQD-----RHGRQFALGPTHEELVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           ++  + LKSY++LP+ L +  S +R+E      GL+R R F   DA+ F   E   ++  
Sbjct: 116 SIVRNELKSYKQLPMTLFQIQSKFRDEKRPRF-GLLRGREFIMKDAYSFHADEASLDQTY 174

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA---ENIMKGVLDTIKNSSQD 461
           + ++     I++  G     V   +       +      +   E+ +    ++   ++ +
Sbjct: 175 QDMYQAYSRIFERVGINARPVVADSGAIGGSHTHEFMALSAIGEDTIVYSKESDYAANIE 234

Query: 462 RINTGVLLGEGA 473
           +           
Sbjct: 235 KAEVVYEPNHKH 246



 Score = 71.0 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 24/152 (15%), Positives = 57/152 (37%), Gaps = 9/152 (5%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI- 556
           +        NA ++++   K  P+++     G       I+ +N   N  +W   +    
Sbjct: 413 LGTKYSESMNATFLDNQG-KAQPLIMGCYGIGISRTLSAIVEQNHDDNGIVWPKSVTPFD 471

Query: 557 -----VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
                +        E A  +     +    +  D R E    K  +  +  +P+ I+ G 
Sbjct: 472 LHLISINPKKDDQRELADALYAEFNTK-FDVLYDDRQERAGVKFNDADLIGLPLRIVVGK 530

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           + ASE  + ++   +  +++V + D + ++T 
Sbjct: 531 R-ASEGIVEVKERLTGDSEEVHIADLMTVITN 561


>gi|47569097|ref|ZP_00239786.1| prolyl-tRNA synthetase [Bacillus cereus G9241]
 gi|47554259|gb|EAL12621.1| prolyl-tRNA synthetase [Bacillus cereus G9241]
          Length = 566

 Score =  135 bits (339), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 90/203 (44%), Gaps = 11/203 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R +++     E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K      ++ R FAL   +      +    +KSY++L
Sbjct: 74  MQAAELWQESGRWYSYGSELMRMKD-----RNAREFALGATHEEVITDLVRDEVKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKD 417
           P+ L +  + +R+E      GL+R R F   DA+ F  T+E +     +++    +I+  
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEVYDRLYKAYSNIFAR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDAL 440
            G +   V   +       +   
Sbjct: 188 CGLKFRAVIADSGAMGGKDTHEF 210



 Score = 78.7 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 61/157 (38%), Gaps = 11/157 (7%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G +  +        NA +++ +  K  P+++     G   R +  + E F     
Sbjct: 404 RGIEVGHVFKLGTRYSEAMNATFLDENG-KTQPLIMGCYGIGVS-RTVAAIAEQFNDESG 461

Query: 546 --LPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              P  ++P    V  +   + +  E  + I N L+     +  D R E    K  +  +
Sbjct: 462 LVWPKAVAPFHVHVIPVNMKSDAQREMGESIYNSLQEQGYEVLLDDRAERAGVKFADADL 521

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
             +P+ +  G K A E  + ++   +  +++V + + 
Sbjct: 522 FGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEEL 557


>gi|329733665|gb|EGG69993.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus 21193]
          Length = 567

 Score =  134 bits (338), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 47/252 (18%), Positives = 103/252 (40%), Gaps = 14/252 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        E+E + HR L +      I +  SG+  +     ++   + + +R++
Sbjct: 4   SKVFIPTMRDVPSEAEAQSHRLLLKSG---LIKQSTSGIYSYLPLATRVLNNITAIVRQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++  D  EI  P +    LW++SG W +Y   +  ++      +  R FAL P +     
Sbjct: 61  MERIDSVEILMPALQQAELWEESGRWGAYGPELMRLQD-----RHGRQFALGPTHEELVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           ++  + LKSY++LP+ L +  S +R+E      GL+R R F   DA+ F   E   ++  
Sbjct: 116 SIVRNELKSYKQLPMTLFQIQSKFRDEKRPRF-GLLRGREFIMKDAYSFHADEASLDQTY 174

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA---ENIMKGVLDTIKNSSQD 461
           + ++     I++  G     V   +       +      +   E+ +    ++   ++ +
Sbjct: 175 QDMYQAYSRIFERVGINARPVVADSGAIGGSHTHEFMALSAIGEDTIVYSKESDYAANIE 234

Query: 462 RINTGVLLGEGA 473
           +           
Sbjct: 235 KAEVVYEPNHKH 246



 Score = 72.1 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 24/152 (15%), Positives = 57/152 (37%), Gaps = 9/152 (5%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI- 556
           +        NA ++++   K  P+++     G       I+ +N   N  +W   +    
Sbjct: 413 LGTKYSESMNATFLDNQG-KAQPLIMGCYGIGISRTLSAIVEQNHDDNGIVWPKSVTPFD 471

Query: 557 -----VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
                +        E A  +     +    +  D R E    K  +  +  +P+ I+ G 
Sbjct: 472 LHLISINPKKDDQRELADALYAEFNTK-FDVLYDDRQERAGVKFNDADLIGLPLRIVVGK 530

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           + ASE  + ++   +  +++V + D + ++T 
Sbjct: 531 R-ASEGIVEVKERLTGDSEEVHIDDLMTVITN 561


>gi|170699968|ref|ZP_02890995.1| prolyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
 gi|170135116|gb|EDT03417.1| prolyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
          Length = 578

 Score =  134 bits (338), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 46/207 (22%), Positives = 84/207 (40%), Gaps = 11/207 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ + R   +  +A    G+  +   G +  + + + +R ++      E+  P 
Sbjct: 17  DAEIVSHKLMVRAGMIRRVA---GGIYNYLPVGLRSIRKVEAIVREEMNRAGAIELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    LWQ+SG W+ Y   +   K   D       F + P +      +  + +KSYR++
Sbjct: 74  VQPAELWQESGRWEQYGPELLRFKDRKDN-----DFVIGPTHEEVVTDIARNQIKSYRQM 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKD 417
           PV   +  + +R+E      G+MR R F   DA+ F       NE   K+++  + I+  
Sbjct: 129 PVNFYQIQTKFRDEIRPRF-GVMRGREFIMKDAYSFDKDTAGLNESYRKMYDAYVRIFTR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDA 444
            G E   V   +       S      A
Sbjct: 188 LGLEFRAVAADSGSIGGNFSHEFHVIA 214



 Score = 84.8 bits (208), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 26/164 (15%), Positives = 61/164 (37%), Gaps = 11/164 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNL 546
           R  + G + Q+         A +++   +   P+++     G   R +G  IE NF    
Sbjct: 409 RGIEVGHVFQLGTKYSEAMGATFLDESGKPQ-PMLMGCYGVGVT-RILGAAIEQNFDDKG 466

Query: 547 PLWL---SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
            +W    +P + ++  +    +    E A ++   L +  + +  D R E       +  
Sbjct: 467 IIWPESIAPFEVVLCPMGYDRSDMVREAADKLYAELAAAGIDVILDDRGERPGVMFADWE 526

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  +P  ++ G++   E  I  +         +   +A   +T+
Sbjct: 527 LIGVPHRLVIGERGLKEGKIEYQGRRDAEATLLPADEAAATVTE 570


>gi|269940754|emb|CBI49136.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TW20]
          Length = 567

 Score =  134 bits (338), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 47/252 (18%), Positives = 103/252 (40%), Gaps = 14/252 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        E+E + HR L +      I +  SG+  +     ++   + + +R++
Sbjct: 4   SKVFIPTMRDVPSEAEAQSHRLLLKSG---LIKQSTSGIYSYLPLATRVLNNITAIVRQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++  D  EI  P +    LW++SG W +Y   +  ++      +  R FAL P +     
Sbjct: 61  MERIDSVEILMPALQQAELWEESGRWGAYGPELMRLQD-----RHGRQFALGPTHEELVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           ++  + LKSY++LP+ L +  S +R+E      GL+R R F   DA+ F   E   ++  
Sbjct: 116 SIVRNELKSYKQLPMTLFQIQSKFRDEKRPRF-GLLRGREFIMKDAYSFHADEASLDQTY 174

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA---ENIMKGVLDTIKNSSQD 461
           + ++     I++  G     V   +       +      +   E+ +    ++   ++ +
Sbjct: 175 QDMYQAYSRIFERVGINARPVVADSGAIGGSHTHEFMALSAIGEDTIVYSKESDYAANIE 234

Query: 462 RINTGVLLGEGA 473
           +           
Sbjct: 235 KAEVVYEPNHKH 246



 Score = 68.7 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 23/152 (15%), Positives = 56/152 (36%), Gaps = 9/152 (5%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI- 556
           +        NA ++++   K   +++     G       I+ +N   N  +W   +    
Sbjct: 413 LGTKYSESMNATFLDNQG-KAQSLIMGCYGIGISRTLSAIVEQNHDDNGIVWPKSVTPFD 471

Query: 557 -----VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
                +        E A  +     +    +  D R E    K  +  +  +P+ I+ G 
Sbjct: 472 LHLISINPKKDDQRELADALYAEFNTK-FDVLYDDRQERAGVKFNDADLIGLPLRIVVGK 530

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           + ASE  + ++   +  +++V + D + ++T 
Sbjct: 531 R-ASEGIVEVKERLTGDSEEVHIDDLMTVITN 561


>gi|29376876|ref|NP_816030.1| prolyl-tRNA synthetase [Enterococcus faecalis V583]
 gi|227519897|ref|ZP_03949946.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0104]
 gi|81838863|sp|Q831W7|SYP_ENTFA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|118138617|pdb|2J3L|A Chain A, Prolyl-Trna Synthetase From Enterococcus Faecalis
           Complexed With A Prolyl-Adenylate Analogue
           ('5'-O-(N-(L-Prolyl)- Sulfamoyl)adenosine)
 gi|118138618|pdb|2J3L|B Chain B, Prolyl-Trna Synthetase From Enterococcus Faecalis
           Complexed With A Prolyl-Adenylate Analogue
           ('5'-O-(N-(L-Prolyl)- Sulfamoyl)adenosine)
 gi|118138619|pdb|2J3M|A Chain A, Prolyl-Trna Synthetase From Enterococcus Faecalis
           Complexed With Atp, Manganese And Prolinol
 gi|118138620|pdb|2J3M|B Chain B, Prolyl-Trna Synthetase From Enterococcus Faecalis
           Complexed With Atp, Manganese And Prolinol
 gi|29344341|gb|AAO82100.1| prolyl-tRNA synthetase [Enterococcus faecalis V583]
 gi|227072691|gb|EEI10654.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0104]
          Length = 572

 Score =  134 bits (338), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 49/254 (19%), Positives = 101/254 (39%), Gaps = 16/254 (6%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++E   H+ L R   +  +A    G+  +     ++ + L + MR +
Sbjct: 4   SKMLIPTLREVPNDAEVLSHQILLRAGYIRQVAA---GIYSYLPLANRVLEKLKTIMREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +  D  E+  P +L   LW++SG +++Y  N++ +K  +D     R + L P +     
Sbjct: 61  FEKIDAVEMLMPALLPAELWKESGRYETYGPNLYRLKDRND-----RDYILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    + SY+ LP+ L +  + YR+E   S  GL+R R F   D + F   E   ++  
Sbjct: 116 ELIRDEINSYKRLPLNLYQIQTKYRDEKR-SRSGLLRGREFIMKDGYSFHADEASLDQSY 174

Query: 406 KIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
           + +      I++  G E   +           S      +E     +  + ++     + 
Sbjct: 175 RDYEKAYSRIFERCGLEFRAIIGDGGAMGGKDSKEFMAISEIGEDTICYSTESDYAANLE 234

Query: 465 TGVLLGEGAFYGPK 478
                   + Y PK
Sbjct: 235 MAT-----SLYTPK 243



 Score = 64.4 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 23/140 (16%), Positives = 49/140 (35%), Gaps = 9/140 (6%)

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG----NLPLWLSPIQAIVTTITSS-- 563
            V   + +   V++     G   R +  ++E        N P  ++P    V  +     
Sbjct: 425 TVLDENGREKSVIMGCYGIGVS-RLLSAIVEQNADERGINWPTGIAPFDLHVVQMNVKDE 483

Query: 564 -AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
              + +QE+  ++      +  D RNE    K  +  +   PI I  G K   +  + ++
Sbjct: 484 YQTKLSQEVEAMMTEAGYEVLVDDRNERAGVKFADADLIGCPIRITVGKKAV-DGVVEVK 542

Query: 623 RFGSTTTQKVSLLDAIPILT 642
              +    +V   +    L+
Sbjct: 543 IKRTGEMLEVRKEELESTLS 562


>gi|319795456|ref|YP_004157096.1| prolyL-tRNA synthetase [Variovorax paradoxus EPS]
 gi|315597919|gb|ADU38985.1| prolyl-tRNA synthetase [Variovorax paradoxus EPS]
          Length = 581

 Score =  134 bits (338), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 77/185 (41%), Gaps = 11/185 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   HR + R   +  +   G+G+  +   G ++ + + + +R ++      E+  P 
Sbjct: 17  DAEVASHRLMMRAGMIKKL---GTGIYTYMPMGLRVIRKVEAIVREEMNRAGAIELTMPV 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V     WQ++G ++     +  +K   D     R F ++P +      +    ++SY++L
Sbjct: 74  VQPAEFWQETGRFEKMGPELLRIKDRHD-----RDFVIQPTSEEVVTDIARQEIRSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKD 417
           P    +  + +R+E      GLMR R F   DA+ F    +        +     +I+  
Sbjct: 129 PKNFYQIQTKFRDERRPRF-GLMRGREFIMKDAYSFDRDLDAAKASYQIMAQAYRNIFDR 187

Query: 418 FGFEK 422
           FG   
Sbjct: 188 FGLRY 192



 Score = 74.4 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 26/155 (16%), Positives = 45/155 (29%), Gaps = 12/155 (7%)

Query: 497 QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN----LPLWLS 551
            V                 E   P  +    +G  I R     IE          P  L+
Sbjct: 422 HVFVLGTKYSKDMNATYLDEGGKPQFLEMGCYGIGITRLPAAAIEQNHDERGIIWPDALA 481

Query: 552 PIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIII 607
           P   +V  I    +      A+ +   L +  + +  D R E       +  +  +P  +
Sbjct: 482 PFTVVVCPIGMDRSPEVKVSAEALYEELLAKGVDVLLDDRGERPGAMFADWELIGVPHRV 541

Query: 608 ICGDKEASERSIGIRRFGSTTTQKVS---LLDAIP 639
           +  D+   E  +  +    T   KV    + D I 
Sbjct: 542 VISDRGLKEGQLEYQHRRDTAATKVPSADIADFIA 576


>gi|241763800|ref|ZP_04761846.1| prolyl-tRNA synthetase [Acidovorax delafieldii 2AN]
 gi|241366932|gb|EER61337.1| prolyl-tRNA synthetase [Acidovorax delafieldii 2AN]
          Length = 580

 Score =  134 bits (338), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 53/326 (16%), Positives = 117/326 (35%), Gaps = 13/326 (3%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       ++E   H+ + R   +  +   G+G+  +   G ++ + + + +R 
Sbjct: 3   ASQFFISTLKEAPADAEVVSHKLMTRAGLIKKL---GAGIYNYMPMGLRVIRKVEAIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LWQ++G ++     +  ++      +  R F ++P +    
Sbjct: 60  EMNRAGAVELTMPVVQPAELWQETGRFEKMGPELLRIQD-----RHGRDFVVQPTSEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    LKSY++LP    +  + +R+E      GLMR R F   DA+ F   +      
Sbjct: 115 TDIARQELKSYKQLPKNFYQIQTKFRDERRPRF-GLMRGREFIMKDAYSFDRDQAAAKAS 173

Query: 405 LKIH-NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            ++       I+  FG     V   +       S+     A      ++   ++     +
Sbjct: 174 YQVMAAAYRRIFDRFGLTYRAVAADSGAIGGDLSEEFQVIAATGEDAIVYCPQSDYAANM 233

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLP--SRFNAFYVNSHSEKCHPV 521
                L      G   + + K A      C  +     +P  +   +  + +        
Sbjct: 234 EKAEALAPTGPRGAATQALTKTATPGKSTCADVAALLAVPLNTTVKSLVLATDETNEAGE 293

Query: 522 MIHRAVFGSIERFIGIMIENFKGNLP 547
           ++   V+  + R    M E   G +P
Sbjct: 294 IVKTQVWLLLLRGDHDMNEIKVGKVP 319



 Score = 82.1 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 57/167 (34%), Gaps = 13/167 (7%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFK 543
           AI R  + G +  +        NA ++    +   P       +G  + R     IE   
Sbjct: 412 AIERGIEVGHVFYLGTKYSKGMNATFLGDDGK---PAFFEMGCYGIGVTRLPAAAIEQNH 468

Query: 544 GN----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
                  P  ++P   ++  +    + +    A+++   L +  + +  D R E      
Sbjct: 469 DERGIIWPDAIAPFTVVICPVGMDRSDAVKAAAEKLYADLLAAGVDVILDDRGERPGAMF 528

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +  +  +P  +  GDK   E  +  +        KV++ D +  + 
Sbjct: 529 ADWELIGVPHRVTIGDKSLKEGVVEYQHRRDAAATKVAVADILARVK 575


>gi|163941557|ref|YP_001646441.1| prolyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|226731430|sp|A9VT57|SYP_BACWK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|163863754|gb|ABY44813.1| prolyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
          Length = 566

 Score =  134 bits (338), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 88/203 (43%), Gaps = 11/203 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R +++     E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K      ++ R FAL   +      +    +KSY++L
Sbjct: 74  MQASELWQESGRWYSYGSELMRMKD-----RNAREFALGATHEEVITDLVRDEIKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKD 417
           P+ L +  + +R+E      GL+R R F   DA+ F  T+E +      ++    +I+  
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEVYSGLYKAYSNIFAR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDAL 440
            G     V   +       +   
Sbjct: 188 CGLNFRAVIADSGAMGGKDTHEF 210



 Score = 79.1 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 61/157 (38%), Gaps = 11/157 (7%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G +  +        NA +++ +  K  P+++     G   R +  + E F     
Sbjct: 404 RGIEVGHVFKLGTRYSEAMNATFLDENG-KTKPLIMGCYGIGVS-RTVAAIAEQFNDENG 461

Query: 546 --LPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              P  ++P    V  +   + +  E  + I N L+     +  D R E    K  +  +
Sbjct: 462 LVWPKSVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERAGVKFADADL 521

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
             +P+ +  G K A E  + ++   +  +++V + + 
Sbjct: 522 FGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEEL 557


>gi|282927605|ref|ZP_06335221.1| prolyl-tRNA synthetase [Staphylococcus aureus A10102]
 gi|282590608|gb|EFB95685.1| prolyl-tRNA synthetase [Staphylococcus aureus A10102]
          Length = 567

 Score =  134 bits (338), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 47/252 (18%), Positives = 103/252 (40%), Gaps = 14/252 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        E+E + HR L +      I +  SG+  +     ++   + + +R++
Sbjct: 4   SKVFIPTMRDVPSEAEAQSHRLLLKSG---LIKQSTSGIYSYLPLATRVLNNITAIVRQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++  D  EI  P +    LW++SG W +Y   +  ++      +  R FAL P +     
Sbjct: 61  MERIDSVEILMPALQQAELWEESGRWGAYGPELMRLQD-----RHGRQFALGPTHEELVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           ++  + LKSY++LP+ L +  S +R+E      GL+R R F   DA+ F   E   ++  
Sbjct: 116 SIVRNELKSYKQLPMTLFQIQSKFRDEKRPRF-GLLRGREFIMKDAYSFHADEASLDQTY 174

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA---ENIMKGVLDTIKNSSQD 461
           + ++     I++  G     V   +       +      +   E+ +    ++   ++ +
Sbjct: 175 QDMYQAYSRIFERVGINARPVVADSGAIGGSHTHEFMALSAIGEDTIVYSKESDYAANIE 234

Query: 462 RINTGVLLGEGA 473
           +           
Sbjct: 235 KAEVVYEPNHKH 246



 Score = 71.7 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 24/152 (15%), Positives = 57/152 (37%), Gaps = 9/152 (5%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI- 556
           +        NA ++++   K  P+++     G       I+ +N   N  +W   +    
Sbjct: 413 LGTKYSESMNATFLDNQG-KAQPLIMGCYGIGISRTLSAIVEQNHDDNGIVWPKSVTPFD 471

Query: 557 -----VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
                +        E A  +     +    +  D R E    K  +  +  +P+ I+ G 
Sbjct: 472 LHLISINPKKDDQRELADALYAEFNTK-FDVLYDDRQERAGVKFNDADLIGLPLRIVVGK 530

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           + ASE  + ++   +  +++V + D + ++T 
Sbjct: 531 R-ASEGIVEVKERLTGDSEEVHIDDLMTVITN 561


>gi|171316236|ref|ZP_02905459.1| prolyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
 gi|171098650|gb|EDT43447.1| prolyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
          Length = 578

 Score =  134 bits (338), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 46/207 (22%), Positives = 84/207 (40%), Gaps = 11/207 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ + R   +  +A    G+  +   G +  + + + +R ++      E+  P 
Sbjct: 17  DAEIVSHKLMVRAGMIRRVA---GGIYNYLPVGLRSIRKVEAIVREEMNRAGAIELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    LWQ+SG W+ Y   +   K   D       F + P +      +  + +KSYR++
Sbjct: 74  VQPAELWQESGRWEQYGPELLRFKDRKDN-----DFVIGPTHEEVVTDIARNQIKSYRQM 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKD 417
           PV   +  + +R+E      G+MR R F   DA+ F       NE   K+++  + I+  
Sbjct: 129 PVNFYQIQTKFRDEIRPRF-GVMRGREFIMKDAYSFDKDTAGLNESYRKMYDAYVRIFTR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDA 444
            G E   V   +       S      A
Sbjct: 188 LGLEFRAVAADSGSIGGNFSHEFHVIA 214



 Score = 84.4 bits (207), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 26/164 (15%), Positives = 61/164 (37%), Gaps = 11/164 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNL 546
           R  + G + Q+         A +++   +   P+++     G   R +G  IE NF    
Sbjct: 409 RGIEVGHVFQLGTKYSEAMGATFLDESGKPQ-PMLMGCYGVGVT-RILGAAIEQNFDDRG 466

Query: 547 PLWL---SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
            +W    +P + ++  +    +    E A ++   L +  + +  D R E       +  
Sbjct: 467 IIWPESIAPFEVVLCPMGYDRSDMVREAADKLYAELTAAGIDVILDDRGERPGVMFADWE 526

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  +P  ++ G++   E  I  +         +   +A   +T+
Sbjct: 527 LIGVPHRLVIGERGLKEGKIEYQGRRDAEATLLPADEAAATVTE 570


>gi|119899055|ref|YP_934268.1| prolyl-tRNA synthetase [Azoarcus sp. BH72]
 gi|152074747|sp|A1K976|SYP_AZOSB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|119671468|emb|CAL95381.1| unnamed protein product [Azoarcus sp. BH72]
          Length = 581

 Score =  134 bits (338), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 45/198 (22%), Positives = 79/198 (39%), Gaps = 10/198 (5%)

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLF--HIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
               Q+     +    D   +++++ L    I +  +G+  +   G K  + + + +R +
Sbjct: 1   MRARQFFISTLKEAPADAEVVSQKLMLRAGMIRKVAAGIYNYLPMGLKSIRKVENIIREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P V    LWQ++G WD     M   K      +  R FAL+P +     
Sbjct: 61  MNRAGALELTMPLVQPSELWQETGRWDKMGPEMLRFKD-----RHERDFALQPTSEEVVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT-KEQMFNEC 404
            +    LKSYR+LP    +  + +R+E      G+MR R FT  DA+ F    E      
Sbjct: 116 DIARQELKSYRQLPKNFYQIQTKFRDERRPRF-GVMRGREFTMKDAYSFDRSAEAAGESY 174

Query: 405 LKIHNLIISIYKDFGFEK 422
             ++     I+   G   
Sbjct: 175 DAMYAAYSRIFDRLGLTY 192



 Score = 81.4 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 30/180 (16%), Positives = 67/180 (37%), Gaps = 11/180 (6%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           P  +   K AI R  + G +  +        NA +++   +  H  M    +   + R +
Sbjct: 404 PSPDGKGKLAIQRGIEVGHVFYLGTKYSKAMNATFLDVDGKPKHFEMGCYGI--GVTRIL 461

Query: 536 GIMIENFKGN----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFR 587
           G  IE          P  ++P + ++  +    + +  + AQ++ + L +  + +  D R
Sbjct: 462 GAAIEQNHDERGIIWPASIAPFEVVICPVGWSKSEAVRDEAQKLYDALVAAGVDVILDDR 521

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLP 647
           +E       +  +  +P  +  GD+   E     +        +V++ +  P L     P
Sbjct: 522 DERPGVMFADWELIGVPHRVTIGDRGLKEGVAEYQGRRDPEASRVAVAEIAPHLISRLRP 581


>gi|302332869|gb|ADL23062.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           JKD6159]
          Length = 567

 Score =  134 bits (338), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 47/252 (18%), Positives = 103/252 (40%), Gaps = 14/252 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        E+E + HR L +      I +  SG+  +     ++   + + +R++
Sbjct: 4   SKVFIPTMRDVPSEAEAQSHRLLLKSG---LIKQSTSGIYSYLPLATRVLNNITAIVRQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++  D  EI  P +    LW++SG W +Y   +  ++      +  R FAL P +     
Sbjct: 61  MERIDSVEILMPALQQAELWEESGRWGAYGPELMRLQD-----RHGRQFALGPTHEELVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           ++  + LKSY++LP+ L +  S +R+E      GL+R R F   DA+ F   E   ++  
Sbjct: 116 SIVRNELKSYKQLPMTLFQIQSKFRDEKRPRF-GLLRGREFIMKDAYSFHADEASLDQTY 174

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA---ENIMKGVLDTIKNSSQD 461
           + ++     I++  G     V   +       +      +   E+ +    ++   ++ +
Sbjct: 175 QDMYQAYSRIFERVGINARPVVADSGAIGGSHTHEFMALSAIGEDTIVYSKESDYAANIE 234

Query: 462 RINTGVLLGEGA 473
           +           
Sbjct: 235 KAEVVYEPNHKH 246



 Score = 75.2 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 27/152 (17%), Positives = 60/152 (39%), Gaps = 9/152 (5%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL---SPIQ 554
           +        NA ++++   K  P+++     G       I+ +N   N  +W    SP  
Sbjct: 413 LGTKYSESMNATFLDNQG-KAQPLIMGCYGIGISRTLSAIVEQNHDDNGIVWPKSVSPFD 471

Query: 555 AIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
             + +I        E A ++          +  D R E    K  +  +  +P+ I+ G 
Sbjct: 472 VHLISINPKKDDQRELADQLYAKFNEK-FDVLYDDRQERAGVKFNDADLIGLPLRIVVGK 530

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           + ASE  + ++   +  +++V + D + ++T 
Sbjct: 531 R-ASEGIVEVKERLTGDSEEVHIDDLMTVITN 561


>gi|283470478|emb|CAQ49689.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ST398]
          Length = 567

 Score =  134 bits (338), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 47/252 (18%), Positives = 103/252 (40%), Gaps = 14/252 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        E+E + HR L +      I +  SG+  +     ++   + + +R++
Sbjct: 4   SKVFIPTMRDVPSEAEAQSHRLLLKAG---LIKQSTSGIYSYLPLATRVLNNITAIVRQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++  D  EI  P +    LW++SG W +Y   +  ++      +  R FAL P +     
Sbjct: 61  MERIDSVEILMPALQQAELWEESGRWGAYGPELMRLQD-----RHGRQFALGPTHEELVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           ++  + LKSY++LP+ L +  S +R+E      GL+R R F   DA+ F   E   ++  
Sbjct: 116 SIVRNELKSYKQLPMTLFQIQSKFRDEKRPRF-GLLRGREFIMKDAYSFHADEASLDQTY 174

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA---ENIMKGVLDTIKNSSQD 461
           + ++     I++  G     V   +       +      +   E+ +    ++   ++ +
Sbjct: 175 QDMYQAYSRIFERVGINARPVVADSGAIGGSHTHEFMALSAIGEDTIVYSKESDYAANIE 234

Query: 462 RINTGVLLGEGA 473
           +           
Sbjct: 235 KAEVVYEPNHKH 246



 Score = 71.7 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 24/152 (15%), Positives = 57/152 (37%), Gaps = 9/152 (5%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI- 556
           +        NA ++++   K  P+++     G       I+ +N   N  +W   +    
Sbjct: 413 LGTKYSESMNATFLDNQG-KAQPLIMGCYGIGISRTLSAIVEQNHDDNGIVWPKSVTPFD 471

Query: 557 -----VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
                +        E A  +     +    +  D R E    K  +  +  +P+ I+ G 
Sbjct: 472 LHLISINPKKDDQRELADALYAEFNTK-FDVLYDDRQERAGVKFNDADLIGLPLRIVVGK 530

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           + ASE  + ++   +  +++V + D + ++T 
Sbjct: 531 R-ASEGIVEVKERLTGDSEEVHIDDLMTVITN 561


>gi|229061422|ref|ZP_04198767.1| Prolyl-tRNA synthetase [Bacillus cereus AH603]
 gi|228717845|gb|EEL69493.1| Prolyl-tRNA synthetase [Bacillus cereus AH603]
          Length = 566

 Score =  134 bits (338), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 48/243 (19%), Positives = 96/243 (39%), Gaps = 25/243 (10%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R +++     E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K      ++ R FAL   +      +    +KSY++L
Sbjct: 74  MQASELWQESGRWYSYGSELMRMKD-----RNAREFALGATHEEVITDLVRDEIKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+ L +  + +R+E      GL+R R F   DA+ F   ++  +E      L  +    F
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEVYS--GLYKAYSNIF 185

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
               +  +        +G     +        VL  +   +       +   + + Y   
Sbjct: 186 ARCSLNFRAVIADSGAMGGKDTHEFM------VLSDVGEDT-------IAYSDTSDYAAN 232

Query: 479 FEY 481
            E 
Sbjct: 233 IEM 235



 Score = 77.5 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 60/157 (38%), Gaps = 11/157 (7%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G +  +        NA +++ +  K  P+++     G   R +  + E F     
Sbjct: 404 RGIEVGHVFKLGTRYSEAMNATFLDENG-KTKPLIMGCYGIGVS-RTVAAIAEQFNDENG 461

Query: 546 --LPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              P  ++P    V  +   + +  E    I N L+     +  D R E    K  +  +
Sbjct: 462 LVWPKSVAPFHVHVIPVNMKSDAQREMGGNIYNSLQEQGYEVLLDDRAERAGVKFADADL 521

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
             +P+ +  G K A E  + ++   +  +++V + + 
Sbjct: 522 FGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEEL 557


>gi|187734550|ref|YP_001876662.1| prolyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835]
 gi|259511572|sp|B2UL92|SYP_AKKM8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|187424602|gb|ACD03881.1| prolyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835]
          Length = 506

 Score =  134 bits (338), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 67/438 (15%), Positives = 154/438 (35%), Gaps = 80/438 (18%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
             +     ++++ +  D+   +E    ++     G+ I++ +   + ++ KD  +     
Sbjct: 11  RAQDFPEWYQQVIKAADMAENSEVRGCMVI-KPWGYAIWELIQKDLDQRFKDTGHTNAYF 69

Query: 297 PQVLD-QHLWQQSGHWDSYRANMFAVKC---------------ADDTIKDLRTFALKPMN 340
           P ++   +L +++ H + +      V                    T +    F ++P +
Sbjct: 70  PLLIPISYLEKEAEHAEGFATECAVVTHHRLEAQKDEATGKTRMIPTGELTEPFVIRPTS 129

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQ 399
                A F     SYR+LP+++ ++ +V R E        +R   F   + H    T+E+
Sbjct: 130 ETVIGAAFARWTSSYRDLPLKVNQWCNVMRWEMRP--RIFLRTAEFLWQEGHTAHETREE 187

Query: 400 MFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSS 459
              E L +H +     +D      +    T  E+  G++  +                  
Sbjct: 188 AIEETLTMHKVYEEFQRDVLAIPTIPGEKTEAERFPGAEQTY------------------ 229

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKC 518
                               E +++D   +  Q GT   +  N     N  +    + + 
Sbjct: 230 ------------------TVEAMVQDR--KAIQAGTSHFLGQNFSKSQNICFAGRDNTQQ 269

Query: 519 HPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSS------AVEYA 568
                  + +G   R IG +I    ++     P  ++P Q ++  +T         +++ 
Sbjct: 270 ---FAWTSSWGVSTRMIGALIMMHSDDDGLVCPPRVAPQQIVIIPVTPKEESRQAVLDHC 326

Query: 569 QEIANLLKS---HHL--SIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRR 623
           +E+A  L++   H     +  D R+     K  E   K +P+ +  G ++  + S+ ++R
Sbjct: 327 EELARTLRAKTFHGQPLRVLVDRRDLGGGAKKWEWVKKGVPVRLEIGPRDLEKGSVCLQR 386

Query: 624 FGSTTTQK--VSLLDAIP 639
                 +K  V   + I 
Sbjct: 387 RDRPANEKSFVPETELID 404


>gi|298373659|ref|ZP_06983648.1| phosphoribulokinase family protein [Bacteroidetes oral taxon 274
           str. F0058]
 gi|298274711|gb|EFI16263.1| phosphoribulokinase family protein [Bacteroidetes oral taxon 274
           str. F0058]
          Length = 554

 Score =  134 bits (338), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 50/244 (20%), Positives = 94/244 (38%), Gaps = 5/244 (2%)

Query: 1   MPSDIKLTFP--DGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS 58
           MP  IK+     D     FP+  T  ++ + +  +L    +   +N K  DL   V    
Sbjct: 1   MPKKIKIICKNLDNREFEFPIGTTLREMYDRLKINLPYPVMMATVNYKTEDLMFQVFRPK 60

Query: 59  I-EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSS 116
           I E               S   ++A+AV+ ++P   + I   I  G+Y + +  E   S+
Sbjct: 61  IVEFKDTSSEAGYRTYVRSLTMVLAKAVKDLFPNDVLRIEHPISHGYYCNINGRETKVSA 120

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
           +++A+I+ +M++IIA D P +       +A + FE++ +   V ++E +  K  V  +  
Sbjct: 121 EKIAKIKTRMKQIIADDLPIISHETPKNEAIKRFEAQGDFNTVSLIERL-GKPFVRYFSL 179

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           G  +D      V STG +  F       G + +                    ++     
Sbjct: 180 GTLYDYYVSVLVPSTGYLSLFDLREYENGIFLQVIDRHHPDRLSQFEPQPKLFKIFDEFS 239

Query: 237 FLEE 240
               
Sbjct: 240 RWNT 243


>gi|258423896|ref|ZP_05686781.1| prolyl-tRNA synthetase [Staphylococcus aureus A9635]
 gi|257845925|gb|EEV69954.1| prolyl-tRNA synthetase [Staphylococcus aureus A9635]
          Length = 567

 Score =  134 bits (338), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 47/252 (18%), Positives = 103/252 (40%), Gaps = 14/252 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        E+E + HR L +      I +  SG+  +     ++   + + +R++
Sbjct: 4   SKVFIPTMRDVPSEAEAQSHRLLLKAG---LIKQSTSGIYSYLPLATRVLNNITAIVRQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++  D  EI  P +    LW++SG W +Y   +  ++      +  R FAL P +     
Sbjct: 61  MERIDSVEILMPALQQAELWEESGRWGAYGPELMRLQD-----RHGRQFALGPTHEELVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           ++  + LKSY++LP+ L +  S +R+E      GL+R R F   DA+ F   E   ++  
Sbjct: 116 SIVRNELKSYKQLPMTLFQIQSKFRDEKRPRF-GLLRGREFIMKDAYSFHADEASLDQTY 174

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA---ENIMKGVLDTIKNSSQD 461
           + ++     I++  G     V   +       +      +   E+ +    ++   ++ +
Sbjct: 175 QDMYQAYSRIFERVGINARPVVADSGAIGGSHTHEFMALSAIGEDTIVYSKESDYAANIE 234

Query: 462 RINTGVLLGEGA 473
           +           
Sbjct: 235 KAEVVYEPNHKH 246



 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 24/152 (15%), Positives = 58/152 (38%), Gaps = 9/152 (5%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI- 556
           +        NA ++++   K  P+++     G       I+ +N   N  +W   +    
Sbjct: 413 LGTKYSESMNATFLDNQG-KAQPLIMGCYGIGISRTLSAIVEQNHDDNGIVWPKSVTPFD 471

Query: 557 -----VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
                +        E A+ +     +    +  D R E    K  +  +  +P+ I+ G 
Sbjct: 472 LHLISINPKKDDQRELAEALYAEFNTK-FDVLYDDRQERAGVKFNDADLIGLPLRIVVGK 530

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           + ASE  + ++   +  +++V + D + ++T 
Sbjct: 531 R-ASEGIVEVKERLTGDSEEVHIDDLMTVITN 561


>gi|121609349|ref|YP_997156.1| prolyl-tRNA synthetase [Verminephrobacter eiseniae EF01-2]
 gi|152112961|sp|A1WKI1|SYP_VEREI RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|121553989|gb|ABM58138.1| prolyl-tRNA synthetase [Verminephrobacter eiseniae EF01-2]
          Length = 581

 Score =  134 bits (338), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 76/185 (41%), Gaps = 11/185 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ + R   +  +   G+G+  +   G ++ + + + +R ++      E+  P 
Sbjct: 17  DAEVVSHQLMMRAGLIKKL---GAGIYSYMPMGLRVLRKIEAIVREEMNRAGAVELTMPV 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    LWQ++G +D     +  ++      +  R F ++P +      +    L+SY++L
Sbjct: 74  VQPAELWQETGRFDKMGPELLRIQD-----RHGRDFVVQPTSEEVITDIARQELRSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH-NLIISIYKD 417
           P    +  + +R+E      GLMR R F   DA+ F            +       I+  
Sbjct: 129 PKNFYQIQTKFRDERRPRF-GLMRGREFIMKDAYSFDRDPAAAKASYLVMEQAYRRIFDR 187

Query: 418 FGFEK 422
           FG   
Sbjct: 188 FGLTY 192



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 53/164 (32%), Gaps = 7/164 (4%)

Query: 486 AIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           AI R  + G +       SR         + K  P+ +     G        + +N    
Sbjct: 413 AIERGIEVGHVFYLGTKYSRAMNASFLDENGKPQPLEMGCYGIGITRLPAAAIEQNHDAR 472

Query: 546 LPLWL---SPIQAIVTTITSSAVEYAQEIANLL----KSHHLSIETDFRNETINYKIREH 598
             +W    +P  A++  I        Q  A+ L     +  + +  D R E       + 
Sbjct: 473 GIIWPDAIAPFTAVICPIGMERSAAVQAAADKLYADFLAAGIDVLLDDRGERPGAMFADW 532

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +  +P  ++  ++   E  +  +     +  KV+  D +  + 
Sbjct: 533 ELIGVPHRVVISERGLKEDQLEYQHRRDQSATKVAAADILAHVK 576


>gi|114566628|ref|YP_753782.1| uridine kinase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|114337563|gb|ABI68411.1| uridine kinase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 557

 Score =  134 bits (338), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 93/198 (46%), Gaps = 3/198 (1%)

Query: 16  NFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIR 74
           N P   + +++ + + + L    +A+ I+ ++ DL+       +IE++       + + R
Sbjct: 22  NVPEGTSVAELVKKLEKKLIYPVMAIIIDNRLRDLNYRFTRSCAIELVDMNSEIGVRIYR 81

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDS 134
            S + ++ +A + ++PE  + +   + +G   +F  E   + + +  IEK+MQEI+  + 
Sbjct: 82  RSMSFLLMKAARDLFPERVLTVKHSLSNGLLCEFLNEDSRTEE-IEAIEKRMQEIVEDNL 140

Query: 135 PFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQV 194
           P  +  ++ EKA+E+F  + E  KV++L      E V +     +++      +  TG +
Sbjct: 141 PIRRMRINKEKAQEIFREQGEEDKVKLLAYRDVDE-VQVCELDGFYENFYIFMLPETGML 199

Query: 195 KKFFKLMKVAGAYWRGDS 212
           KKF       G   +   
Sbjct: 200 KKFRLFEYPPGMILQTPE 217


>gi|293189858|ref|ZP_06608572.1| proline--tRNA ligase [Actinomyces odontolyticus F0309]
 gi|292821273|gb|EFF80218.1| proline--tRNA ligase [Actinomyces odontolyticus F0309]
          Length = 602

 Score =  134 bits (338), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 36/203 (17%), Positives = 79/203 (38%), Gaps = 11/203 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +        G+  W   G +  + +   +R ++     +E++ P 
Sbjct: 19  DAEVNSHKLLVRAGYIR---RSAPGIYTWLPLGLRTLRKIEDIVREEMDAMGAQEVHFPG 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++    ++ +  W+ Y   +F +       +    + L P +      +      SY++L
Sbjct: 76  LIPAEPYKATNRWEEYGPTLFKLND-----RKGGDYLLAPTHEEMFTLLVKDMYSSYKDL 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI-HNLIISIYKD 417
           P  L +  + YR+E      GL+R R F   DA+ F   ++  N   +   +    I++ 
Sbjct: 131 PATLYQIQTKYRDEARPR-AGLIRGREFVMKDAYSFDIDDEGLNASYQAERDTYERIFQR 189

Query: 418 FGFEKIMVKLSTRPEKRVGSDAL 440
            G   ++V   +       S+  
Sbjct: 190 LGLRYVIVSAMSGAMGGSRSEEF 212



 Score = 82.5 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 61/163 (37%), Gaps = 11/163 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE----NFK 543
           R  + G I Q+            ++ + +     M    +   + R +  + E    +  
Sbjct: 434 RGIEIGHIFQLGRKYAKALGLTVLDENGKTQVVTMGSYGI--GVTRVMAALAEANCDDKG 491

Query: 544 GNLPLWLSPIQAIVTTIT--SSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSI 600
            + P  ++P    V          E AQ +   L +  L +  D R + +   K +++ +
Sbjct: 492 LSWPAQIAPFDVHVLATGKGDEVFETAQSLGEELDAAGLDVLVDDRRKVSAGVKFKDYEL 551

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             +P  ++ G +  ++  + IR   +  T  + + +A+  L +
Sbjct: 552 VGVPFGLVVG-RSLADSEVEIRVRATGETIVLPVEEAVARLRE 593


>gi|253731882|ref|ZP_04866047.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253724292|gb|EES93021.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
          Length = 567

 Score =  134 bits (338), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 47/252 (18%), Positives = 103/252 (40%), Gaps = 14/252 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        E+E + HR L +      I +  SG+  +     ++   + + +R++
Sbjct: 4   SKVFIPTMRDVPSEAEAQSHRLLLKSG---LIKQSTSGIYSYLPLATRVLNNITAIVRQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++  D  EI  P +    LW++SG W +Y   +  ++      +  R FAL P +     
Sbjct: 61  MERIDSVEILMPALQQAELWEESGRWGAYGPELMRLQD-----RHGRRFALGPTHEELVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           ++  + LKSY++LP+ L +  S +R+E      GL+R R F   DA+ F   E   ++  
Sbjct: 116 SIVRNELKSYKQLPMTLFQIQSKFRDEKRPRF-GLLRGREFIMKDAYSFHADEASLDQTY 174

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA---ENIMKGVLDTIKNSSQD 461
           + ++     I++  G     V   +       +      +   E+ +    ++   ++ +
Sbjct: 175 QDMYQAYSRIFERVGINARPVVADSGAIGGSHTHEFMALSAIGEDTIVYSKESDYAANIE 234

Query: 462 RINTGVLLGEGA 473
           +           
Sbjct: 235 KAEVVYEPNHKH 246



 Score = 71.7 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 24/152 (15%), Positives = 57/152 (37%), Gaps = 9/152 (5%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI- 556
           +        NA ++++   K  P+++     G       I+ +N   N  +W   +    
Sbjct: 413 LGTKYSESMNATFLDNQG-KAQPLIMGCYGIGISRTLSAIVEQNHDDNGIVWPKSVTPFD 471

Query: 557 -----VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
                +        E A  +     +    +  D R E    K  +  +  +P+ I+ G 
Sbjct: 472 LHLISINPKKDDQRELADALYAEFNTK-FDVLYDDRQERAGVKFNDADLIGLPLRIVVGK 530

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           + ASE  + ++   +  +++V + D + ++T 
Sbjct: 531 R-ASEGIVEVKERLTGDSEEVHIDDLMTVITN 561


>gi|49483426|ref|YP_040650.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|257425317|ref|ZP_05601742.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257427978|ref|ZP_05604376.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257430611|ref|ZP_05606993.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 68-397]
 gi|257433371|ref|ZP_05609729.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus E1410]
 gi|257436213|ref|ZP_05612260.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876]
 gi|282905581|ref|ZP_06313436.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282908556|ref|ZP_06316386.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282910835|ref|ZP_06318638.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282914040|ref|ZP_06321827.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282918962|ref|ZP_06326697.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427]
 gi|282924085|ref|ZP_06331761.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101]
 gi|283958006|ref|ZP_06375457.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|293501072|ref|ZP_06666923.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 58-424]
 gi|293510034|ref|ZP_06668742.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809]
 gi|293526620|ref|ZP_06671305.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|295427750|ref|ZP_06820382.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|297591292|ref|ZP_06949930.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|81175023|sp|Q6GHH2|SYP_STAAR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|49241555|emb|CAG40241.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|257271774|gb|EEV03912.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257274819|gb|EEV06306.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257278739|gb|EEV09358.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 68-397]
 gi|257281464|gb|EEV11601.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus E1410]
 gi|257284495|gb|EEV14615.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876]
 gi|282314057|gb|EFB44449.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101]
 gi|282316772|gb|EFB47146.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427]
 gi|282322108|gb|EFB52432.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282325440|gb|EFB55749.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282327618|gb|EFB57901.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282330873|gb|EFB60387.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|283790155|gb|EFC28972.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|290920692|gb|EFD97755.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|291096077|gb|EFE26338.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 58-424]
 gi|291466978|gb|EFF09496.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809]
 gi|295128108|gb|EFG57742.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|297576178|gb|EFH94894.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|312438357|gb|ADQ77428.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus TCH60]
 gi|315194151|gb|EFU24544.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS00]
          Length = 567

 Score =  134 bits (338), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 47/252 (18%), Positives = 103/252 (40%), Gaps = 14/252 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        E+E + HR L +      I +  SG+  +     ++   + + +R++
Sbjct: 4   SKVFIPTMRDVPSEAEAQSHRLLLKAG---LIKQSTSGIYSYLPLATRVLNNITAIVRQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++  D  EI  P +    LW++SG W +Y   +  ++      +  R FAL P +     
Sbjct: 61  MERIDSVEILMPALQQAELWEESGRWGAYGPELMRLQD-----RHGRQFALGPTHEELVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           ++  + LKSY++LP+ L +  S +R+E      GL+R R F   DA+ F   E   ++  
Sbjct: 116 SIVRNELKSYKQLPMTLFQIQSKFRDEKRPRF-GLLRGREFIMKDAYSFHADEASLDQTY 174

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA---ENIMKGVLDTIKNSSQD 461
           + ++     I++  G     V   +       +      +   E+ +    ++   ++ +
Sbjct: 175 QDMYQAYSRIFERVGINARPVVADSGAIGGSHTHEFMALSAIGEDTIVYSKESDYAANIE 234

Query: 462 RINTGVLLGEGA 473
           +           
Sbjct: 235 KAEVVYEPNHKH 246



 Score = 71.7 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 24/152 (15%), Positives = 57/152 (37%), Gaps = 9/152 (5%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI- 556
           +        NA ++++   K  P+++     G       I+ +N   N  +W   +    
Sbjct: 413 LGTKYSESMNATFLDNQG-KAQPLIMGCYGIGISRTLSAIVEQNHDDNGIVWPKSVTPFD 471

Query: 557 -----VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
                +        E A  +     +    +  D R E    K  +  +  +P+ I+ G 
Sbjct: 472 LHLISINPKKDDQRELADALYAEFNTK-FDVLYDDRQERAGVKFNDADLIGLPLRIVVGK 530

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           + ASE  + ++   +  +++V + D + ++T 
Sbjct: 531 R-ASEGIVEVKERLTGDSEEVHIDDLMTVITN 561


>gi|154509145|ref|ZP_02044787.1| hypothetical protein ACTODO_01666 [Actinomyces odontolyticus ATCC
           17982]
 gi|153798779|gb|EDN81199.1| hypothetical protein ACTODO_01666 [Actinomyces odontolyticus ATCC
           17982]
          Length = 602

 Score =  134 bits (338), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 36/203 (17%), Positives = 79/203 (38%), Gaps = 11/203 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +        G+  W   G +  + +   +R ++     +E++ P 
Sbjct: 19  DAEVNSHKLLVRAGYIR---RSAPGIYTWLPLGLRTLRKIEDIVREEMDAMGAQEVHFPG 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++    ++ +  W+ Y   +F +       +    + L P +      +      SY++L
Sbjct: 76  LIPAEPYKATNRWEEYGPTLFKLND-----RKGGDYLLAPTHEEMFTLLVKDMYSSYKDL 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI-HNLIISIYKD 417
           P  L +  + YR+E      GL+R R F   DA+ F   ++  N   +   +    I++ 
Sbjct: 131 PATLYQIQTKYRDEARPR-AGLIRGREFVMKDAYSFDIDDEGLNASYQAERDTYERIFQR 189

Query: 418 FGFEKIMVKLSTRPEKRVGSDAL 440
            G   ++V   +       S+  
Sbjct: 190 LGLRYVIVSAMSGAMGGSRSEEF 212



 Score = 87.1 bits (214), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 62/163 (38%), Gaps = 11/163 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE----NFK 543
           R  + G I Q+            ++ + +     M    +   + R +  + E    +  
Sbjct: 434 RGIEIGHIFQLGRKYAKALGLTVLDENGKTQVVTMGSYGI--GVTRVMAALAEANCDDKG 491

Query: 544 GNLPLWLSPIQAIVTTIT--SSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSI 600
            + P  ++P    V          E AQ +   L +  L +  D R + +   K +++ +
Sbjct: 492 LSWPAQIAPFDVHVLATGKGDEVFETAQSLGEELDAAGLDVLVDDRRKVSAGVKFKDYEL 551

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             +P  ++ G +  ++  + IR  G+  T  V + +A+  L +
Sbjct: 552 VGVPFGLVVG-RSLADGDVEIRVRGTGETIVVPVEEAVARLRE 593


>gi|121603656|ref|YP_980985.1| prolyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2]
 gi|152112939|sp|A1VK86|SYP_POLNA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|120592625|gb|ABM36064.1| prolyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2]
          Length = 581

 Score =  134 bits (338), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 38/199 (19%), Positives = 85/199 (42%), Gaps = 11/199 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       ++E   H+ + R   +  +   G+G+  +   G ++ + + + +R 
Sbjct: 3   ASQFFISTLKEAPADAEIVSHQLMMRAGLIKKL---GAGIYNYMPMGLRVIRKVEAIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E++ P +    LWQ++G +++    +  +K      +  R F ++P +    
Sbjct: 60  EMNRAGAIEMSMPVIQPAELWQETGRFEAMGPELLRIKD-----RHGRDFVVQPTSEEVV 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             V    ++SY++LP  L +  + +R+E      GLMR R F   DA+ F   +      
Sbjct: 115 TDVMRQDIRSYKQLPKNLYQIQTKFRDERRPRF-GLMRGREFIMKDAYSFDRDQTAAKVS 173

Query: 405 LK-IHNLIISIYKDFGFEK 422
            + +      I+  FG   
Sbjct: 174 YQNMAEAYRRIFDRFGLTY 192



 Score = 74.0 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 29/151 (19%), Positives = 48/151 (31%), Gaps = 11/151 (7%)

Query: 486 AIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           AI R  + G +       SR  A       E   P  +    +G  I R     IE    
Sbjct: 413 AIERGIEVGHVFYLGTKYSR--AMNATFLGENGKPQFLEMGCYGIGITRLPAAAIEQNHD 470

Query: 545 N----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                 P  ++P   ++  IT          A ++ + L    + +  D R E       
Sbjct: 471 ERGIIWPDAIAPFTVVICPITPERFPDVKAAADKLYSELLGAGVDVILDDRGERPGAMFA 530

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGST 627
           +  +  +P  +  GD+   E  I  +    T
Sbjct: 531 DWELIGVPHRVTIGDRGLKEGHIEYQHRRDT 561


>gi|285019440|ref|YP_003377151.1| prolyl-tRNA synthetase [Xanthomonas albilineans GPE PC73]
 gi|283474658|emb|CBA17157.1| probable prolyl-trna synthetase protein [Xanthomonas albilineans]
          Length = 564

 Score =  134 bits (338), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 44/220 (20%), Positives = 82/220 (37%), Gaps = 11/220 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  L        ++E   HR + R   +  +A   SG+  W   G ++ + + + +R +
Sbjct: 4   SQFHLHTTKETPADAELVSHRLMLRAGMIRKLA---SGLYTWSPLGLRVLRKVETVVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P +  + LW  +G W  +   M  ++   +     + +   P       
Sbjct: 61  MNRAGALEVVFPTIQPRELWDATGRWKKFGDLMLRIRDRKE-----QDYCYSPTAEEAAA 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF-NEC 404
               H L SY++LPV   +  S +R+E      G+MR R F   DA+ F   +     E 
Sbjct: 116 DFARHELNSYKQLPVNFYQIQSKFRDEIRPRF-GVMRAREFLMKDAYSFHLSDTDLAREY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
             +      I+   G +   V+  +       S      A
Sbjct: 175 ENMKAAYHRIFTRLGLQFRAVQADSGDIGGDASQEFHVLA 214



 Score = 70.6 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 26/186 (13%), Positives = 58/186 (31%), Gaps = 19/186 (10%)

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
           V+ GE A  G +        + R  + G + Q+        +A  ++ + +    V +  
Sbjct: 387 VVEGERAQDGGEI------RLARGIEVGHVFQLGRQYAQALDATVLDENGKT---VAMAM 437

Query: 526 AVFGS-IERFIGIMIENFKGNLPL-W---LSPIQAIVTTITSSAVEYAQE----IANLLK 576
             +G  I R +   IE       + W   ++P    +  I              +   L+
Sbjct: 438 GCYGIGISRIVAAAIEQNHDAAGIRWPQPMAPWAVAICVINPKHDPAIDAAGDALLADLQ 497

Query: 577 SHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
              L    D R         +  +  IP  ++  ++  +  +   R       + ++   
Sbjct: 498 QAGLDAILDDRGLRAGTMFADIELIGIPHRVVVSERGLAAGTFEYRARSGGDPESLNHTA 557

Query: 637 AIPILT 642
            +  L 
Sbjct: 558 LLAKLR 563


>gi|120612314|ref|YP_971992.1| prolyl-tRNA synthetase [Acidovorax citrulli AAC00-1]
 gi|152074741|sp|A1TTD0|SYP_ACIAC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|120590778|gb|ABM34218.1| prolyl-tRNA synthetase [Acidovorax citrulli AAC00-1]
          Length = 581

 Score =  134 bits (338), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 38/199 (19%), Positives = 82/199 (41%), Gaps = 11/199 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       ++E   H+ + R   +  +   G+G+  +   G ++ + + + +R 
Sbjct: 3   ASQFFVSTLKEAPADAEVVSHKLMTRAGLIKKL---GAGIYNYMPMGLRVIRKVEAIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V     WQ++G +D     +  ++      +  R F ++P +    
Sbjct: 60  EMNRAGAVEVTMPVVQPAEYWQETGRFDKMGPELLRIRD-----RHGRDFVVQPTSEEVV 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    L+SY++LP  L +  + +R+E      GLMR R F   DA+ F   +      
Sbjct: 115 TDIARQELRSYKQLPKNLYQIQTKFRDERRPRF-GLMRGREFIMKDAYSFDRDQAAAKAS 173

Query: 405 LKIH-NLIISIYKDFGFEK 422
            ++       I+  FG   
Sbjct: 174 YQVMAQAYRRIFDRFGLTY 192



 Score = 78.3 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 52/167 (31%), Gaps = 11/167 (6%)

Query: 486 AIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           AI R  + G +       SR  A       E   P       +G  I R     IE    
Sbjct: 413 AIERGIEVGHVFYLGTKYSR--AMNATFLGEDGKPAFFEMGCYGIGITRLPAAAIEQNHD 470

Query: 545 N----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                 P  ++P   +V  I    +      A+++   L +  + +  D R E       
Sbjct: 471 ERGIIWPDAIAPFTVVVCPIGMDRSDEVRAAAEKLHADLLTAGVDVILDDRGERPGAMFA 530

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  +  +P  ++  D+   E  +  +        KV+  D    +  
Sbjct: 531 DWELIGVPHRVVLSDRGLKEGQVEYQHRRDAAATKVASADIFAFIKD 577


>gi|325928567|ref|ZP_08189755.1| prolyl-tRNA synthetase, family II [Xanthomonas perforans 91-118]
 gi|325541106|gb|EGD12660.1| prolyl-tRNA synthetase, family II [Xanthomonas perforans 91-118]
          Length = 564

 Score =  134 bits (338), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 45/241 (18%), Positives = 91/241 (37%), Gaps = 11/241 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  L        ++E   HR + R   +  +A   SG+  W   G ++ + + + +R +
Sbjct: 4   SQFHLHTTKETPADAELVSHRLMLRAGMIRKLA---SGLYTWSPLGLRVLRKVEAIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P +  + LW  +G W+ +   +  +K   +     + F   P       
Sbjct: 61  MNRAGAVEVLFPTIQPRELWDATGRWEKFGGQLLKIKDRKE-----QEFCYSPTAEEAAA 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNEC 404
                 + SY++LP+   +  + +R+E      G+MR R F   DA+ F  T E M  E 
Sbjct: 116 EFARQEINSYKQLPLNFYQIQTKFRDEIRPRF-GVMRAREFLMKDAYSFHLTDEDMAREY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
             +      I+   G +   V+  +       S      A++    +  +  +     + 
Sbjct: 175 DNMRAAYTRIFTRLGLDFRAVQADSGAIGGDASQEFHVIADSGEDSLAFSTGSDYAANVE 234

Query: 465 T 465
           T
Sbjct: 235 T 235



 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 50/164 (30%), Gaps = 13/164 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGN 545
           R  + G + Q+         A  ++   E     ++    +G  I R +   IE N    
Sbjct: 403 RGIEVGHVFQLGSQYAQALQATVID---EGGKAAVMKMGCYGIGISRIVAAAIEQNHDDA 459

Query: 546 LPLW---LSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF----RNETINYKIREH 598
             +W   ++P Q +V  I           A  L    L+   D     R         + 
Sbjct: 460 GIIWPAPMAPWQVVVCVINPKQDPQVLAAAQALLDQLLAAGLDAALDDRGLRPGAMFADM 519

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +  IP  ++  ++  +  +   R   +   + +        L 
Sbjct: 520 ELLGIPHRVVVSERGLAAGTFEYRARTADAAESLDKAALFSRLA 563


>gi|300780959|ref|ZP_07090813.1| proline--tRNA ligase [Corynebacterium genitalium ATCC 33030]
 gi|300532666|gb|EFK53727.1| proline--tRNA ligase [Corynebacterium genitalium ATCC 33030]
          Length = 611

 Score =  134 bits (338), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 38/203 (18%), Positives = 79/203 (38%), Gaps = 11/203 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +        GV  W   G K  + +   +R ++     +E+  P 
Sbjct: 32  DAEVPSHKLLVRAGYIR---RAAPGVYSWLPLGLKAVRNIEEIVREEMNAIGAQELLFPA 88

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++ +  W  Y  ++F ++    T        L P +             SY++ 
Sbjct: 89  LLPREPYEATNRWTEYGDDLFRLQDRKGT-----DMLLGPTHEEMFTLAVKDLYSSYKDF 143

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH-NLIISIYKD 417
           PV L +  + YR+E      G++R R F   D++ F   ++  +E    H     +I+  
Sbjct: 144 PVTLYQIQTKYRDEARPR-AGILRGREFVMKDSYSFDMTDEGLSESYAAHRRAYQAIFDR 202

Query: 418 FGFEKIMVKLSTRPEKRVGSDAL 440
            G +  + + ++       S+  
Sbjct: 203 VGLKYEICQATSGAMGGSASEEF 225



 Score = 79.4 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 24/166 (14%), Positives = 66/166 (39%), Gaps = 14/166 (8%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE----NFK 543
           R  + G I Q+        +   ++ + ++  P M    +   + R + ++ E    +  
Sbjct: 443 RGIELGHIFQLGRKYTEAMDVQILDENGKRAVPTMGSYGI--GVTRMLAVIAEQLHDDKG 500

Query: 544 GNLPLWLSPIQAIVTTITSSA--VEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSI 600
              P+ ++P Q  +      A  +E ++ +    ++  + +  D R + +   K ++  +
Sbjct: 501 LVWPVEIAPYQVHLAVANKDAAAMEASERLVGEFEAAGIDVLVDDRPKVSPGVKFKDAEL 560

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQ---KVSLLDAIPILTK 643
             +P I+I G +  ++  I +R  G        +V   + +  + +
Sbjct: 561 LGMPFIVILG-RSFADGIIELRIRGGENGGEILEVPADEIVSRVQE 605


>gi|162138530|ref|YP_365423.2| prolyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria str.
           85-10]
 gi|114152278|sp|Q3BP90|SYP_XANC5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
          Length = 564

 Score =  134 bits (338), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 45/241 (18%), Positives = 91/241 (37%), Gaps = 11/241 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  L        ++E   HR + R   +  +A   SG+  W   G ++ + + + +R +
Sbjct: 4   SQFHLHTTKETPADAELVSHRLMLRAGMIRKLA---SGLYTWSPLGLRVLRKVEAIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P +  + LW  +G W+ +   +  +K   +     + F   P       
Sbjct: 61  MNRAGAVEVLFPTIQPRELWDATGRWEKFGGQLLKIKDRKE-----QEFCYSPTAEEAAA 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNEC 404
                 + SY++LP+   +  + +R+E      G+MR R F   DA+ F  T E M  E 
Sbjct: 116 EFARQEINSYKQLPLNFYQIQTKFRDEIRPRF-GVMRAREFLMKDAYSFHLTDEDMAREY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
             +      I+   G +   V+  +       S      A++    +  +  +     + 
Sbjct: 175 DNMRAAYTRIFTRLGLDFRAVQADSGAIGGDASQEFHVIADSGEDSLAFSTGSDYAANVE 234

Query: 465 T 465
           T
Sbjct: 235 T 235



 Score = 59.8 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 50/163 (30%), Gaps = 13/163 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGN 545
           R  + G + Q+         A  ++   E     ++    +G  I R +   IE N    
Sbjct: 403 RGIEVGHVFQLGSQYAQALQATVID---EGGKAAVMKMGCYGIGISRIVAAAIEQNHDDA 459

Query: 546 LPLW---LSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF----RNETINYKIREH 598
             +W   ++P Q +V  I           A  L    L+   D     R         + 
Sbjct: 460 GIIWPAPMAPWQVVVCVINPKQDPQVLAAAQALLDQLLAAGLDAALDDRGLRPGAMFADM 519

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            +  IP  ++  ++  +  +   R   +   + +        L
Sbjct: 520 ELLGIPHRVVVSERGLAAGTFEYRARTADAAESLDKAALFSRL 562


>gi|299142098|ref|ZP_07035232.1| phosphoribulokinase family protein [Prevotella oris C735]
 gi|298576560|gb|EFI48432.1| phosphoribulokinase family protein [Prevotella oris C735]
          Length = 553

 Score =  134 bits (337), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 44/242 (18%), Positives = 94/242 (38%), Gaps = 3/242 (1%)

Query: 1   MPSDIKLTFPDGSIKN-FPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-S 58
           M   +++   +        + +T SD+    +  +    +   +N KV  +   V     
Sbjct: 1   MKQAVQIRCKNNKKTEKVAIGSTLSDIFSQFNLPMPYGPICAKVNNKVEGMHYRVYHSKD 60

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           +E +    P +      +   ++ +AV  ++P+  V I   + +G+Y +     P    +
Sbjct: 61  VEFLDMHSPSASRNYTRTLFFVLCKAVHDLYPKSYVIIDIPVSNGYYVNLQLGHPVEQTD 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           + +I ++MQEII    P  +  +  E+A ++F  + +  K ++LES   K   T Y   +
Sbjct: 121 VDRIRRRMQEIIDAHMPVKRFEVPAEQAIKMFRDRGDEAKAKLLES-AGKLYTTYYEIDD 179

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D   G  + +T  +  F       G   R  S             +   E+ +  +  
Sbjct: 180 YVDFYYGSLLTNTRSLYLFGLDKYYDGLLLRIPSIENPGVLPEIIRQDKMFEIFKEHHRW 239

Query: 239 EE 240
           +E
Sbjct: 240 QE 241


>gi|331698443|ref|YP_004334682.1| Prolyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190]
 gi|326953132|gb|AEA26829.1| Prolyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190]
          Length = 577

 Score =  134 bits (337), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 41/208 (19%), Positives = 86/208 (41%), Gaps = 11/208 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +  +A    GV  W   G ++ + +   +R ++     +EI  P 
Sbjct: 15  DAEVPSHKLLVRAGYVRRVA---PGVYSWLPLGLRVLRRIEEIVREEMDAIGAQEIQFPA 71

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++ +  W  Y  N+F +K      +    + L P +             SY++ 
Sbjct: 72  LLPRDPYESTNRWTEYGPNLFRLKD-----RKGNDYLLGPTHEELFTLAVKGEYSSYKDY 126

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKD 417
           PV L +  + YR+E      G++R R F   D++ F   ++  +E   +H    + ++  
Sbjct: 127 PVILYQIQNKYRDEERPR-AGILRGREFLMKDSYSFDLSDEGLSESYALHRKAYVKVFDR 185

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAE 445
                ++V  ++       S+    +AE
Sbjct: 186 LSLRYVIVSATSGAMGGSASEEFLAEAE 213



 Score = 85.6 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/162 (19%), Positives = 66/162 (40%), Gaps = 12/162 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN- 545
           R  + G I Q+     + F    +   S+   PV I    +G  + R + ++ E      
Sbjct: 415 RGIEIGHIFQLGRKYTNAFGLDALGPDSK---PVRITMGSYGIGVSRLVAVIAEQSHDES 471

Query: 546 ---LPLWLSP--IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
               P  +SP  +  +V           +++A  L++  LS+  D R  +   K  +  +
Sbjct: 472 GLVWPRAVSPYDVHVVVAGKNEEITAGGEKLAAELEAAGLSVLLDDRKASPGVKFADAEL 531

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             +P I++ G +  ++  I ++   S   ++++L  A+  L 
Sbjct: 532 VGVPTIVVVG-RGLADGKIEVKDRRSGEREEIALDGAVAHLV 572


>gi|21230114|ref|NP_636031.1| prolyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
 gi|66769896|ref|YP_244658.1| prolyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           8004]
 gi|81304150|sp|Q4UQN5|SYP_XANC8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|81860394|sp|Q8PCS4|SYP_XANCP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|21111643|gb|AAM39955.1| prolyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
 gi|66575228|gb|AAY50638.1| prolyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           8004]
          Length = 564

 Score =  134 bits (337), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 47/241 (19%), Positives = 91/241 (37%), Gaps = 11/241 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  L        ++E   HR + R   +  +A   SG+  W   G ++ + + + +R +
Sbjct: 4   SQFHLHTTKETPADAELVSHRLMLRAGMIRKLA---SGLYTWSPLGLRVLRKVEAIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P +  + LW  +G W+ +   +  +K   +     + F   P       
Sbjct: 61  MNRAGAVEVLFPTIQPRELWDATGRWEKFGGQLLKIKDRKE-----QEFCYTPTAEEAAA 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNEC 404
                 + SY++LP+   +  + +R+E      G+MR R F   DA+ F  T   M  E 
Sbjct: 116 EFARQEINSYKQLPLNFYQIQTKFRDEIRPRF-GVMRAREFLMKDAYSFHLTDADMAREY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
             +    I I+   G E   V+  +       S      AE+    +  +  +     + 
Sbjct: 175 DNMRAAYIRIFTRLGLEFRAVQADSGAIGGDASQEFHVIAESGEDSLAFSTGSDYAANVE 234

Query: 465 T 465
           T
Sbjct: 235 T 235



 Score = 71.4 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 20/163 (12%), Positives = 53/163 (32%), Gaps = 13/163 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGNL 546
           R  + G + Q+         A  ++ + +     ++    +G  I R +   IE    + 
Sbjct: 403 RGIEVGHVFQLGSKYAEALQATVLDENGKA---AVMKMGCYGIGISRIVAAAIEQNHDDA 459

Query: 547 PL-WLSPIQ---AIVTTITSSAVEY----AQEIANLLKSHHLSIETDFRNETINYKIREH 598
            + W +P+     +V  I           A ++   L +  +    D R         + 
Sbjct: 460 GIVWPAPMAPWKVVVCVINPKQDAQVAAAAGDLLEELIAAGIDAALDDRGLRPGAMFADM 519

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            +  +P  ++  ++  +  +   R   + + + +        L
Sbjct: 520 ELLGVPHRVVVSERGLAAGTFEYRARTAESAENLDKAGLFSRL 562


>gi|256379843|ref|YP_003103503.1| prolyl-tRNA synthetase [Actinosynnema mirum DSM 43827]
 gi|255924146|gb|ACU39657.1| prolyl-tRNA synthetase [Actinosynnema mirum DSM 43827]
          Length = 581

 Score =  134 bits (337), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 53/300 (17%), Positives = 108/300 (36%), Gaps = 14/300 (4%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +  +A    G   W   G ++ + +   +R ++     +EI  P 
Sbjct: 19  DAEVPSHKLLVRAGYVRRVA---PGGYSWLPLGLRVLRNIERVVREEMDAIGAQEIQFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++ +  W  Y  N+F +K      +    + L P +             SY++ 
Sbjct: 76  LLPKEPYEATNRWTEYGPNIFRLKD-----RKGADYLLGPTHEELFALTVKGEYSSYKDY 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKD 417
           PV L +  + YR+E      G++R R F   D++ F  T E +     +     I I+  
Sbjct: 131 PVALYQIQTKYRDEARPR-AGILRGREFVMKDSYSFDLTDEGLAEAYQRHRAAYIKIFDR 189

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
            G + ++V  ++       S+     A N     + + ++     +         A   P
Sbjct: 190 LGMDYVIVSATSGAMGGSASEEFLAVAPNGEDTFVRSTESDYAANVEAVTTPAPPAQ--P 247

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
             E   +  +       TI       +        + ++    V++   V GS    + I
Sbjct: 248 -VEGRPEAQVHSTPATPTIDTLVEFFNNAGLGREFTAADTLKNVLVKTRVPGSDWELLAI 306



 Score = 84.4 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 30/161 (18%), Positives = 63/161 (39%), Gaps = 12/161 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN- 545
           R  + G I Q+       F+   +    +   PV I    +G  + R +  + E    + 
Sbjct: 419 RGIEIGHIFQLGRKYADAFSLDALGPDGK---PVRITMGSYGIGVSRLVAAIAEQSHDDR 475

Query: 546 ---LPLWLSPIQAIVTTITSSA--VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
               P  ++P    V      A  +E  +++A  L S  LS+  D R  +   K  +  +
Sbjct: 476 GLIWPRNVAPADVHVVVAGKDATLLEGGEKLAGELSSAGLSVLLDDRKASPGVKFADAEL 535

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
             +P I++ G +  +   + ++   S    +V + +A+  +
Sbjct: 536 VGVPTILVVG-RGLASGLVEVKDRRSGERVEVPVDEAVQHV 575


>gi|282903818|ref|ZP_06311706.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|282595436|gb|EFC00400.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
          Length = 567

 Score =  134 bits (337), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 47/252 (18%), Positives = 103/252 (40%), Gaps = 14/252 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        E+E + HR L +      I +  SG+  +     ++   + + +R++
Sbjct: 4   SKVFIPTMRDVPSEAEAQSHRLLLKAG---LIKQSTSGIYSYLPLATRVLNNITAIVRQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++  D  EI  P +    LW++SG W +Y   +  ++      +  R FAL P +     
Sbjct: 61  MERIDSVEILMPALQQAELWEESGRWGAYGPELMRLQD-----RHGRQFALGPTHEELVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           ++  + LKSY++LP+ L +  S +R+E      GL+R R F   DA+ F   E   ++  
Sbjct: 116 SIVRNELKSYKQLPMTLFQIQSKFRDEKRPRF-GLLRGREFIMKDAYSFHADEASLDQTY 174

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA---ENIMKGVLDTIKNSSQD 461
           + ++     I++  G     V   +       +      +   E+ +    ++   ++ +
Sbjct: 175 QDMYQAYSRIFERVGINARPVVADSGAIGGSHTHEFMALSAIGEDTIVYSKESDYAANIE 234

Query: 462 RINTGVLLGEGA 473
           +           
Sbjct: 235 KAEVVYEPNHKH 246



 Score = 71.7 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 24/152 (15%), Positives = 57/152 (37%), Gaps = 9/152 (5%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI- 556
           +        NA ++++   K  P+++     G       I+ +N   N  +W   +    
Sbjct: 413 LGTKYSESMNATFLDNQG-KAQPLIMGCYGIGISRTLSAIVEQNHDDNGIVWPKSVTPFD 471

Query: 557 -----VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
                +        E A  +     +    +  D R E    K  +  +  +P+ I+ G 
Sbjct: 472 LHLISINPKKDDQRELADALYAEFNTK-FDVLYDDRQERAGVKFNDADLIGLPLRIVVGK 530

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           + ASE  + ++   +  +++V + D + ++T 
Sbjct: 531 R-ASEGIVEVKERLTGDSEEVHIDDLMTVITN 561


>gi|149183492|ref|ZP_01861921.1| prolyl-tRNA synthetase [Bacillus sp. SG-1]
 gi|148848804|gb|EDL63025.1| prolyl-tRNA synthetase [Bacillus sp. SG-1]
          Length = 569

 Score =  134 bits (337), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 45/216 (20%), Positives = 91/216 (42%), Gaps = 11/216 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +   +        ++E + H++L R      I ++ SG+  +   G K+ Q +   +R +
Sbjct: 4   SMTLIPTLRETPADAEVKSHQQLLRAG---FIRQNSSGIYSFLPLGRKVLQKVEEIIREE 60

Query: 287 I-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P +    LWQ+SG W +Y   +  ++      +  R+FAL   +     
Sbjct: 61  MINAGGVELLMPALQQAELWQESGRWGTYGPELMRLED-----RHKRSFALGATHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
           ++    +KSY++LP+ L +  + +R+E      GL+R R F   DA+ F +  E + +  
Sbjct: 116 SLVRDEIKSYKKLPLTLFQIQTKFRDEKRPRF-GLLRGREFIMKDAYSFHSSYESLDDTY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            KI     +++   G     V   +       +   
Sbjct: 175 EKIFQAYSNVFTRCGLNFRAVIADSGAMGGKDTHEF 210



 Score = 76.0 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 57/170 (33%), Gaps = 9/170 (5%)

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIG 536
              +     +G  ++ GT   D       +           C+ + + R +    E++  
Sbjct: 399 TIVFAKGIEVGHVFKLGTRYSDAMGAQYLDENGRAQSMIMGCYGIGVSRTLAAVAEQY-- 456

Query: 537 IMIENFKGNLPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
              +      P  L+P    +  I        E A+++ + LK     +  D R E    
Sbjct: 457 --CDENGLQWPSSLTPFDVHIVPINIKNDEQRELAEQLYSELKEQRFDVLLDDRQERPGV 514

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           K  +  +  +P  +  G K A++  + ++   +    +V   +    L +
Sbjct: 515 KFTDSDLIGLPFRVTVGKK-AADGVVEVKIRKTGDVIEVHKDELTAKLQE 563


>gi|78037678|emb|CAJ25423.1| prolyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria str.
           85-10]
          Length = 621

 Score =  134 bits (337), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 45/241 (18%), Positives = 91/241 (37%), Gaps = 11/241 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  L        ++E   HR + R   +  +A   SG+  W   G ++ + + + +R +
Sbjct: 61  SQFHLHTTKETPADAELVSHRLMLRAGMIRKLA---SGLYTWSPLGLRVLRKVEAIVREE 117

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P +  + LW  +G W+ +   +  +K   +     + F   P       
Sbjct: 118 MNRAGAVEVLFPTIQPRELWDATGRWEKFGGQLLKIKDRKE-----QEFCYSPTAEEAAA 172

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNEC 404
                 + SY++LP+   +  + +R+E      G+MR R F   DA+ F  T E M  E 
Sbjct: 173 EFARQEINSYKQLPLNFYQIQTKFRDEIRPRF-GVMRAREFLMKDAYSFHLTDEDMAREY 231

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
             +      I+   G +   V+  +       S      A++    +  +  +     + 
Sbjct: 232 DNMRAAYTRIFTRLGLDFRAVQADSGAIGGDASQEFHVIADSGEDSLAFSTGSDYAANVE 291

Query: 465 T 465
           T
Sbjct: 292 T 292



 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 50/163 (30%), Gaps = 13/163 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGN 545
           R  + G + Q+         A  ++   E     ++    +G  I R +   IE N    
Sbjct: 460 RGIEVGHVFQLGSQYAQALQATVID---EGGKAAVMKMGCYGIGISRIVAAAIEQNHDDA 516

Query: 546 LPLW---LSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF----RNETINYKIREH 598
             +W   ++P Q +V  I           A  L    L+   D     R         + 
Sbjct: 517 GIIWPAPMAPWQVVVCVINPKQDPQVLAAAQALLDQLLAAGLDAALDDRGLRPGAMFADM 576

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            +  IP  ++  ++  +  +   R   +   + +        L
Sbjct: 577 ELLGIPHRVVVSERGLAAGTFEYRARTADAAESLDKAALFSRL 619


>gi|62078861|ref|NP_001014086.1| probable prolyl-tRNA synthetase, mitochondrial precursor [Rattus
           norvegicus]
 gi|73919763|sp|Q5M7W7|SYPM_RAT RecName: Full=Probable prolyl-tRNA synthetase, mitochondrial;
           AltName: Full=Proline--tRNA ligase; Short=ProRS; Flags:
           Precursor
 gi|56789529|gb|AAH88403.1| Prolyl-tRNA synthetase 2, mitochondrial (putative) [Rattus
           norvegicus]
 gi|149035787|gb|EDL90468.1| rCG50302 [Rattus norvegicus]
          Length = 475

 Score =  134 bits (337), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 61/386 (15%), Positives = 126/386 (32%), Gaps = 49/386 (12%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I     G         +  + L+  + ++++    ++IN P +    LW+ +G WD    
Sbjct: 80  ILPASPGCYHLMPYTVRAVEKLVRVIDQEMQAIGGQKINMPSLSPAELWRATGRWDLMGR 139

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPSG 375
            +  +K      +  + + L P +     A+     K SY++LP+ L +    +R+EP  
Sbjct: 140 ELLRLKD-----RHGKEYCLGPTHEEAVTALVASQKKLSYKQLPLLLYQVTRKFRDEPRP 194

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKDFGFEKIMVKLSTRPEKR 434
              GL+R R F   D + F +  +   E   +       ++   G   +  +        
Sbjct: 195 RF-GLLRGREFYMKDMYTFDSSSEAAQETYSLVCDAYCRLFDRLGLRWMKARADVGSIGG 253

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY------ILKDAIG 488
             S                   +  +DR+    ++     +    E       I  D  G
Sbjct: 254 TMSHEF------------QLPVDIGEDRL----VVCPSCHFSANTEIVDLSQKICPDCQG 297

Query: 489 RDWQCGTIQVDFNLP---SRFNAFYVNSHSEKCHPVMIHRAVFG-SIERFIGIMIENFKG 544
              +   I+V           + F  +  +     ++     +G  + R +   IE    
Sbjct: 298 PLTETKGIEVGHTFYLGTKYSSIFNAHFTNAHGESLLAEMGCYGLGVTRILAAAIEVLST 357

Query: 545 ----NLPLWLSPIQAIVTTITSSAVEYA---------QEIANLLKSHHLSIETDFRNE-T 590
                 P  L+P Q  +      + E A          ++   L      +  D R   T
Sbjct: 358 EDCIRWPSLLAPYQVCIIPPKKGSKEAAATEIVERLYDDVTEALPQLRGEVLLDDRTHLT 417

Query: 591 INYKIREHSIKKIPIIIICGDKEASE 616
           I  ++++ +    P +II   +   +
Sbjct: 418 IGNRLKDANKLGYPFVIIASKRALED 443


>gi|205373425|ref|ZP_03226229.1| prolyl-tRNA synthetase [Bacillus coahuilensis m4-4]
          Length = 494

 Score =  134 bits (337), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 46/208 (22%), Positives = 90/208 (43%), Gaps = 11/208 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G ++   +   +R ++      E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMKQNTSGIYSFLPLGKRVLAKVEQIIREEMENAGVVEMFMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W +Y + +  +K      +  R FAL   +     ++    +KSY++L
Sbjct: 74  LQQAELWQESGRWYTYGSELMRMKD-----RHGREFALGATHEEVITSLLRDDVKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKD 417
           P+ L +  + YR+E      GL+R R F   DA+ F  +KE +     +I     +I++ 
Sbjct: 129 PLSLYQIQTKYRDEARPRF-GLLRGREFIMKDAYSFHASKESLDETYDRIFQAYSNIFER 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAE 445
            G     V   +       +      +E
Sbjct: 188 CGLNYRAVIADSGAMGGKDTHEFMVLSE 215


>gi|228909643|ref|ZP_04073466.1| Prolyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
 gi|228849932|gb|EEM94763.1| Prolyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
          Length = 566

 Score =  134 bits (337), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 87/203 (42%), Gaps = 11/203 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E + H+ L R      + ++ SG+  +   G K+   +   +R +++     E+  P 
Sbjct: 17  DAEIKSHQLLLRAG---FMRQNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W SY + +  +K      ++ R FAL   +      +    +KSY++L
Sbjct: 74  MQAAELWQESGRWYSYGSELMRMKD-----RNAREFALGATHEEVITDLVRDEIKSYKKL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI-HNLIISIYKD 417
           P+ L +  + +R+E      GL+R R F   DA+ F   ++  +E     +    +I+  
Sbjct: 129 PLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEVYDCLYKAYSNIFAR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDAL 440
            G     V   +       +   
Sbjct: 188 CGLNFRAVIADSGAMGGKDTHEF 210



 Score = 77.9 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 60/157 (38%), Gaps = 11/157 (7%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G +  +        NA +++ +  K  P+++     G   R +  + E F     
Sbjct: 404 RGIEVGHVFKLGTRYSEAMNATFLDENG-KTQPLIMGCYGIGVS-RTVAAIAEQFNDENG 461

Query: 546 --LPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              P  ++P    V  +   +    E  + I N L+     +  D R E    K  +  +
Sbjct: 462 LVWPKAVAPFHVHVIPVNMKSDVQREMGENIYNSLQEKGYEVLLDDRAERAGVKFADADL 521

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
             +P+ +  G K A E  + ++   +  +++V + + 
Sbjct: 522 FGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEEL 557


>gi|188993111|ref|YP_001905121.1| prolyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           B100]
 gi|226701356|sp|B0RVJ2|SYP_XANCB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|167734871|emb|CAP53083.1| unnamed protein product [Xanthomonas campestris pv. campestris]
          Length = 564

 Score =  134 bits (337), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 47/241 (19%), Positives = 91/241 (37%), Gaps = 11/241 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  L        ++E   HR + R   +  +A   SG+  W   G ++ + + + +R +
Sbjct: 4   SQFHLHTTKETPADAELVSHRLMLRAGMIRKLA---SGLYTWSPLGLRVLRKVEAIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P +  + LW  +G W+ +   +  +K   +     + F   P       
Sbjct: 61  MNRAGAVEVLFPTIQPRELWDATGRWEKFGGQLLKIKDRKE-----QEFCYTPTAEEAAA 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNEC 404
                 + SY++LP+   +  + +R+E      G+MR R F   DA+ F  T   M  E 
Sbjct: 116 EFARQEINSYKQLPLNFYQIQTKFRDEIRPRF-GVMRAREFLMKDAYSFHLTDADMAREY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
             +    I I+   G E   V+  +       S      AE+    +  +  +     + 
Sbjct: 175 DNMRAAYIRIFTRLGLEFRAVQADSGAIGGDASQEFHVIAESGEDSLAFSTGSDYAANVE 234

Query: 465 T 465
           T
Sbjct: 235 T 235



 Score = 71.0 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 21/163 (12%), Positives = 53/163 (32%), Gaps = 13/163 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGNL 546
           R  + G + Q+         A  ++ + +     ++    +G  I R +   IE    + 
Sbjct: 403 RGIEVGHVFQLGSKYAEALQATVLDENGKA---AVMKMGCYGIGISRIVAAAIEQNHDDA 459

Query: 547 PL-WLSPIQ---AIVTTITSSAVEY----AQEIANLLKSHHLSIETDFRNETINYKIREH 598
            + W +P+     +V  I           A ++   L +  +    D R         + 
Sbjct: 460 GIVWPAPMAPWKVVVCVINPKQDAQVAAAAGDLLEELIAAGIDAALDDRGLRPGAMFADM 519

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            +  IP  ++  ++  +  +   R   + + + +        L
Sbjct: 520 ELLGIPHRVVVSERGLAAGTFEYRARTAESAENLDKAGLFSRL 562


>gi|115968758|ref|XP_001192510.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus
           purpuratus]
          Length = 114

 Score =  134 bits (337), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 39/112 (34%), Positives = 57/112 (50%), Gaps = 3/112 (2%)

Query: 2   PSDIKLTFPDGSIKNF-PVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
           P+ IK+T PDG          T  ++A+ IS+ LA  AV   +NG + DL  P  E S +
Sbjct: 3   PAPIKITLPDGKEVEGQSWRTTPYEIAQGISQGLADNAVISKVNGVLWDLDRPFEEDSKM 62

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE 111
           E+   +      V  HS AH++ EA++  +    +  GP IE GFYYD   +
Sbjct: 63  ELHKFDSEEGQQVFWHSSAHMLGEAMERKYGGC-LCYGPPIESGFYYDSFID 113


>gi|49486102|ref|YP_043323.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|81175024|sp|Q6G9V0|SYP_STAAS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|49244545|emb|CAG42974.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MSSA476]
          Length = 567

 Score =  134 bits (337), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 46/216 (21%), Positives = 93/216 (43%), Gaps = 11/216 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        E+E + HR L +      I +  SG+  +     ++   + + +R++
Sbjct: 4   SKVFIPTMRDVPSEAEAQSHRLLLKSG---LIKQSTSGIYSYLPLATRVLNNITAIVRQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++  D  EI  P +    LW++SG W +Y   +  ++      +  R FAL P +     
Sbjct: 61  MERIDSVEILMPALQQAELWEESGRWGAYGPELMRLQD-----RHGRQFALGPTHEELVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           ++  + LKSY++LP+ L +  S +R+E      GL+R R F   DA+ F   E   ++  
Sbjct: 116 SIVRNELKSYKQLPMTLFQIQSKFRDEKRPRF-GLLRGREFIMKDAYSFHADEASLDQTY 174

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           + ++     I++  G     V   +       +   
Sbjct: 175 QDMYQAYSRIFERVGINARPVVADSGAIGGSHTHEF 210



 Score = 72.1 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 24/152 (15%), Positives = 57/152 (37%), Gaps = 9/152 (5%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI- 556
           +        NA ++++   K  P+++     G       I+ +N   N  +W   +    
Sbjct: 413 LGTKYSESMNATFLDNQG-KAQPLIMGCYGIGISRTLSAIVEQNHDDNGIVWPKSVTPFD 471

Query: 557 -----VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
                +        E A  +     +    +  D R E    K  +  +  +P+ I+ G 
Sbjct: 472 LHLISINPKKDDQRELADALYAEFNTK-FDVLYDDRQERAGVKFNDADLIGLPLRIVVGK 530

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           + ASE  + ++   +  +++V + D + ++T 
Sbjct: 531 R-ASEGIVEVKERLTGDSEEVHIDDLMTVITN 561


>gi|302339646|ref|YP_003804852.1| ATPase AAA [Spirochaeta smaragdinae DSM 11293]
 gi|301636831|gb|ADK82258.1| AAA ATPase [Spirochaeta smaragdinae DSM 11293]
          Length = 553

 Score =  134 bits (337), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 46/250 (18%), Positives = 96/250 (38%), Gaps = 9/250 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKK----AVAVAINGKVCDLSDPVR-EG 57
           + + +T PDGS K        S+    +  S A       VA  +N  +   S  +  + 
Sbjct: 2   NQVTVTLPDGSKKTVAYGTRVSEF---LPPSEADDLQGPVVAALVNNDLVTPSFKIEIDA 58

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSD 117
           ++E +T        + R S + ++  A + ++P+  + IG  + DG+YY ++        
Sbjct: 59  TVEPVTLYSRYGNRIYRRSLSFLLGLASKKVFPDRHLVIGHSLGDGYYYYYNGMAGVGEG 118

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           E+A++E++M  I+    P  +  +S+E+A E    +      E+L        + LY   
Sbjct: 119 EIARLEEEMHAIVKAALPIKRSVISYEQALERVRKENLPA-TELLLRYRNDPKIPLYMCD 177

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           ++FD+   P + +T  +  F       G   R   ++                + +    
Sbjct: 178 QFFDISYEPLLDNTSLLSLFELRNYPPGFLLRYPKSKEPTKLAEFIDHPLLFSIFKEYKA 237

Query: 238 LEESEKRDHR 247
             +    +  
Sbjct: 238 WGKILDVNCT 247


>gi|221068963|ref|ZP_03545068.1| prolyl-tRNA synthetase [Comamonas testosteroni KF-1]
 gi|220713986|gb|EED69354.1| prolyl-tRNA synthetase [Comamonas testosteroni KF-1]
          Length = 580

 Score =  134 bits (337), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 41/217 (18%), Positives = 86/217 (39%), Gaps = 11/217 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            TQ  ++       ++E   H+ + R   +  +   G+G+  +   G ++ + + + +R 
Sbjct: 3   ATQFLISTLKEAPADAEVVSHKLMMRAGMIKKL---GAGIYNYMPMGLRVIRKVEAIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E   P V    LWQ++G ++     +  ++      +  R F ++P +    
Sbjct: 60  EMNRAGAIETTMPVVQPAELWQETGRFEKMGPELLRIQD-----RHGRDFVIQPTSEEVV 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
             +     KSY++LP  L +  + +R+E      GLMR R F   DA+ F    +     
Sbjct: 115 TDIARQEFKSYKQLPKNLYQIQTKFRDERRPRF-GLMRGREFIMKDAYSFDKDRDAAQIS 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
              +      I+  FG +   V+  +       S+  
Sbjct: 174 YQTMREAYKRIFDRFGLQYRAVRADSGAIGGDLSEEF 210



 Score = 79.4 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 23/164 (14%), Positives = 57/164 (34%), Gaps = 7/164 (4%)

Query: 486 AIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           AI R  + G +       S+         + K     +     G        + +N    
Sbjct: 412 AIERGIEIGHVFYLGTKYSKAMDATFLGDNGKPQHFEMGCYGIGVTRLPAAAVEQNHDER 471

Query: 546 LPLWL---SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
             +W    +P   ++  I    + +    A+++   L +  + +  D R+E     + + 
Sbjct: 472 GMIWPDAIAPFTVVICPIGMGRSEAVKTEAEKLYGELLALGVDVILDDRDERPGAMLADW 531

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +  +P  ++ GD+   E  +  ++   T   K++  + +  L 
Sbjct: 532 ELIGVPHRVVLGDRGLKEGVVEYQQRRDTEATKLATNEVLGHLK 575


>gi|315604524|ref|ZP_07879587.1| proline--tRNA ligase [Actinomyces sp. oral taxon 180 str. F0310]
 gi|315313536|gb|EFU61590.1| proline--tRNA ligase [Actinomyces sp. oral taxon 180 str. F0310]
          Length = 602

 Score =  134 bits (337), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 37/203 (18%), Positives = 79/203 (38%), Gaps = 11/203 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +   A    G+  W   G +  + +   +R ++     +E++ P 
Sbjct: 19  DAEVNSHKLLVRAGYIRRTA---PGIYTWLPLGLRTLRKIEDIVREEMDAMGAQEVHFPG 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++    ++ +  W+ Y   +F ++      +    + L P +      +      SY++L
Sbjct: 76  LIPAEPYKATNRWEEYGPTLFKLED-----RKGGDYLLAPTHEEMFTLLVKDMFSSYKDL 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI-HNLIISIYKD 417
           P  L +  + YR+E      GL+R R F   DA+ F   E   +   +   +    I+  
Sbjct: 131 PTTLYQIQTKYRDEARPR-AGLIRGREFVMKDAYSFDVTEVGLDASYQAERDTYERIFTR 189

Query: 418 FGFEKIMVKLSTRPEKRVGSDAL 440
            G   ++V   +       S+  
Sbjct: 190 LGLRYVIVSAMSGAMGGSRSEEF 212



 Score = 74.0 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 55/163 (33%), Gaps = 11/163 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE----NFK 543
           R  + G I Q+            ++   +     M    +   + R +  + E       
Sbjct: 434 RGIEIGHIFQLGRKYAQALGLTVLDECGKTQVVTMGSYGI--GVTRVMAALAEANCDERG 491

Query: 544 GNLPLWLSPIQAIVTTIT--SSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSI 600
            + P  ++P    V            A  + + L    L +  D R + +   K ++  +
Sbjct: 492 LSWPAQIAPFDVHVLATGKGEEVFATAASLGDELDVAGLDVLVDDRRKVSAGVKFKDFEL 551

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             IP  ++ G +  ++  + IR   +  T  V + +A   L +
Sbjct: 552 VGIPFGLVVG-RSLADGKVEIRVRATGETIVVPVEEAAARLRE 593


>gi|307297853|ref|ZP_07577659.1| prolyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306917113|gb|EFN47495.1| prolyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 580

 Score =  134 bits (337), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 43/186 (23%), Positives = 79/186 (42%), Gaps = 8/186 (4%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
            + +  +G+  +   G+++ + +   +R+++     +EI  P +    LW ++G WD Y 
Sbjct: 31  FVRKVAAGIYSFLPLGFRVLKKIEDIVRQEMNAIGSQEILMPIIQPAELWHETGRWDDYG 90

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
             M  ++      +  R F L P +      +  + L SY++LPV L +    YR+E   
Sbjct: 91  PEMMRMQD-----RHERFFTLGPTHEEIITHLLRNELNSYKQLPVSLYQIAMKYRDEIRP 145

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              GLMR R F   DA+ F       +E  K  +     I +  G E ++V+  +     
Sbjct: 146 RF-GLMRSREFLMKDAYSFHGSWSSLDETYKQFYGAYSKILQRIGLEFLVVEADSGAIGG 204

Query: 435 VGSDAL 440
             S   
Sbjct: 205 NESHEF 210



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 65/175 (37%), Gaps = 9/175 (5%)

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
            PK    +K A G +      ++      + N +  +      H  ++    +G      
Sbjct: 392 CPKCGAPMKSAKGIEV-GHIFKLGTKYSEKMNGYVTDEKGNSIH-YIMGCYGWGVSRTIS 449

Query: 536 GIMIENFKGNLPLWL---SPIQAIVTTITSS---AVEYAQEIANLLKSHHLSIETDFRNE 589
            I+ +    N  +W    +P   IVT +        E + ++ ++L      +  D R  
Sbjct: 450 AIVEQLHDENGIIWPLAVAPFDIIVTAVNIKDPIVSEKSIQLYDILSEAGFEVLLDDREI 509

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +   K ++  +  IP+ I  G K  ++  + ++        +VS++D    L +E
Sbjct: 510 SPGMKFKDADLIGIPVRITLGKK-LAQGIVEVKPRTEKKPLEVSIVDGFDTLLEE 563


>gi|319788022|ref|YP_004147497.1| prolyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1]
 gi|317466534|gb|ADV28266.1| prolyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1]
          Length = 565

 Score =  134 bits (337), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 42/241 (17%), Positives = 91/241 (37%), Gaps = 11/241 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  L        ++E   H+ + R   +  +A    G+  W   G ++ + + + +R +
Sbjct: 4   SRFHLHTTKETPADAELVSHKLMLRAGMIRKLAA---GLYTWTPLGLRVLRKVEAVVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P +  + LW+++G W  +   +  +K   +       +   P       
Sbjct: 61  MNRAGAVELQLPTIQPRELWEETGRWGKFGGQLLKIKDRKEA-----EYCFSPTAEEAIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNEC 404
                 L SY++LPV   +  + +R+E      G+MR R F   DA+ F  + E +  E 
Sbjct: 116 DFARQELSSYKQLPVNFYQIHTKFRDEIRPRF-GVMRAREFLMKDAYSFHVSDEDLAREY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
             +    I ++   G E   V+  +       S      A++    +  +  +     + 
Sbjct: 175 ENMKAAYIRVFGRLGLEFRAVQADSGAIGGDASQEFHVLADSGEDALAFSTASDYAANVE 234

Query: 465 T 465
           T
Sbjct: 235 T 235



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 21/164 (12%), Positives = 49/164 (29%), Gaps = 11/164 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G + Q+            ++ + +   P M    +   + R +   IE       
Sbjct: 403 RGIEVGHVFQLGRKYSQAMGFTVLDENGKAVVPAMGCYGI--GVSRIVAAAIEQNHDEAG 460

Query: 548 L-W---LSPIQAIVTTITSS----AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           + W   ++P    V  I         E A+ +   L++  +    D R         +  
Sbjct: 461 IVWPVPMAPWTVAVCVINPKKDAQVDEAAESLLVELQAAGIDAVLDDRGLRPGPMFADME 520

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  IP  ++   +     +   R       + +     +  L +
Sbjct: 521 LIGIPHRVVVSARGLEAGTYEYRARSGGEAEALDRAQLLERLRQ 564


>gi|299139552|ref|ZP_07032726.1| prolyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8]
 gi|298598480|gb|EFI54644.1| prolyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8]
          Length = 614

 Score =  134 bits (337), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 46/216 (21%), Positives = 93/216 (43%), Gaps = 10/216 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  +        ++E   H+ L R   +  +   G+G+  +   G +    +I+ +R 
Sbjct: 4   WSKLFIPTLREAPTDAEVASHKLLLRAGYIRQL---GAGIYSYLPLGQRSLNKIIAIVRE 60

Query: 286 KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++    +E   P +  + LW++SG W     N+F ++      +      L   +     
Sbjct: 61  EMNKIGQEFLLPALNPRELWEESGRWTGMGQNLFHLQD-----RKGAELCLAMTHEEVMT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           ++  + L+SY++LP    +  + +R+EP     GL+RVR FT  DA+ F   +   +E  
Sbjct: 116 SIARNELRSYKQLPQIWYQIQTKFRDEPRPK-AGLLRVRQFTMKDAYSFDVDQAGLDESY 174

Query: 406 -KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            K ++  + I+K  G E + V   +      GS   
Sbjct: 175 RKHYDTYVRIFKRCGLEFVAVDADSGAMGGSGSQEF 210



 Score = 82.9 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 66/167 (39%), Gaps = 14/167 (8%)

Query: 487 IGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           +G+  + G I  +         A  ++++ ++  P+M    +   IER +   IE+    
Sbjct: 443 LGKAVEIGHIFKLGTKYSESMGARVLDANGKEVLPIMGCYGI--GIERILTAAIESSAAA 500

Query: 546 -------LPLWLSPIQAIVTTITSSAVEYA---QEIANLLKSHHLSIETDFRNETINYKI 595
                  LP  ++P   +VT       +     ++IA  L++  + +  D R+E    K 
Sbjct: 501 NAGEQYALPAAIAPFAVVVTITNVREADLLAAGEKIAADLEAAGVDVLLDDRDERAGVKF 560

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           ++  +  +P  I  G K  +E  + +    + TT  + L      + 
Sbjct: 561 KDAELIGVPYRINIGKK-LAEGQVELVDRLTQTTTDLPLDAITAHIQ 606


>gi|9105289|gb|AAF83255.1|AE003895_6 prolyl-tRNA synthetase [Xylella fastidiosa 9a5c]
          Length = 582

 Score =  134 bits (337), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 41/236 (17%), Positives = 83/236 (35%), Gaps = 10/236 (4%)

Query: 213 NRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLF--HIAEDGSGVIFWHR 270
                +  +         L+++     +    D   ++  + L    I +  SG+  W  
Sbjct: 3   RNRWQNTRFIFLGELPMRLSEFHLHTTKEIPADAELVSHRLMLRAGMIRKLASGLYTWSP 62

Query: 271 KGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
            G ++ + + + +R ++      E+  P +  + LW++S  W+ +   +  +K       
Sbjct: 63  LGLRVLRKVEAIVRDEMNRAGAVEMLLPTIQPRELWEESERWEKFGNQLLKIKDRKQA-- 120

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
               +   P             L SY++LPV L +  + +R+E      G+MR R F   
Sbjct: 121 ---EYCYSPTAEEAVTDYVRQELTSYKQLPVNLYQIQTKFRDEIRPRF-GVMRAREFVMK 176

Query: 390 DAHVFCTKEQMF-NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
           DA+ F   +     E   +      I+   G E   V+  +       S      A
Sbjct: 177 DAYSFHLNDADLVREYENMRATYTRIFTRLGLEFRAVQADSGAIGGDASQEFHVIA 232



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 55/168 (32%), Gaps = 19/168 (11%)

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
           V+ G+ A  G K        I R  + G + Q+         A  ++ + +    V +  
Sbjct: 405 VIEGDRAVDGGKI------CIARGIEVGHVFQLGRKYAEAMKATVLDEYGKA---VTMTM 455

Query: 526 AVFGS-IERFIGIMIENFKGN----LPLWLSPIQAIVTTITSSAVEY----AQEIANLLK 576
             +G  + R +   IE          P  ++P Q  V  I           A+ +   L+
Sbjct: 456 GCYGIGVSRIVAAAIEQNHDVAGIIWPASIAPWQVAVCVINPKKDPVITAAAEVLLAELQ 515

Query: 577 SHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRF 624
           S  +    D R         +  +  IP  I+  ++  +  +   R  
Sbjct: 516 SADVDTVLDDRGLRPGVMFADMELIGIPHRIVVSERGLAAGTYEYRAR 563


>gi|296454700|ref|YP_003661843.1| prolyl-tRNA synthetase [Bifidobacterium longum subsp. longum
           JDM301]
 gi|296184131|gb|ADH01013.1| prolyl-tRNA synthetase [Bifidobacterium longum subsp. longum
           JDM301]
          Length = 604

 Score =  134 bits (337), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 38/186 (20%), Positives = 77/186 (41%), Gaps = 8/186 (4%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
           +I +   G+  W   G ++   + + +R +I     +E++ P +L +  ++ +  W+ Y 
Sbjct: 36  YIRKAAPGIWTWLPLGLRVLNKIEAIIREEINGIGAQEVHFPALLPREPYEATHRWEEYG 95

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            N+F +K      +    + L P +      +      SY++LPV L +  + YR+E   
Sbjct: 96  DNIFRLKD-----RHEADYLLAPTHEEMFTLLVKDMYSSYKDLPVTLYQIQTKYRDEFRP 150

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNE-CLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              GL+R R F   DA+ F   E+   +           I++    + + V   + P   
Sbjct: 151 R-AGLIRGREFIMKDAYSFTIDEEGMRKAYYDERGAYERIFQRLDLKYVPVFAMSGPMGG 209

Query: 435 VGSDAL 440
             S+  
Sbjct: 210 SASEEF 215



 Score = 81.8 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 61/164 (37%), Gaps = 12/164 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN- 545
           R  + G + Q+        +   ++ + +    V +    +G  + R +  + E      
Sbjct: 438 RGVEIGQVFQLGLKYSKALDLKVLDQNGKA---VPVWMGCYGIGVSRVLACIAETHHDEA 494

Query: 546 ---LPLWLSPIQAIVTTITSSAVEY--AQEIANLLKSHHLSIETDFRNE-TINYKIREHS 599
               P  ++P    V      AV +  A+++   L++  L +  D R + +   K ++  
Sbjct: 495 GLAWPSVIAPAAVHVVATGKDAVAFEGAEKLVAELEAKGLEVIYDDRKKVSPGVKFKDAE 554

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  +P+I + G    ++ +I IR         V   +A   L  
Sbjct: 555 LIGVPLIAVVGRDYVNDGTIEIRDRNGENKVAVPAAEAAGTLAD 598


>gi|147668995|ref|YP_001213813.1| prolyl-tRNA synthetase [Dehalococcoides sp. BAV1]
 gi|189083496|sp|A5FS84|SYP_DEHSB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|146269943|gb|ABQ16935.1| prolyl-tRNA synthetase [Dehalococcoides sp. BAV1]
          Length = 569

 Score =  134 bits (337), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 50/217 (23%), Positives = 93/217 (42%), Gaps = 11/217 (5%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DD 290
                   ++E   H+ L R      IA+  +GV  +    W+  Q + + +R+++    
Sbjct: 9   KTQREIPSDAETISHQLLLRSGM---IAQLTAGVYSFMPLAWRSIQKIETIIRQEMNKAG 65

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH 350
            +E+  P +    +WQQSG    +   +F +K   D     R   L P +      + + 
Sbjct: 66  CQELAMPVLQPVEIWQQSGREAPFGQTLFHLKDRKD-----RNLVLGPTHEEVITDLASR 120

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHN 409
            ++SYR+LP RL +  + +R+EP     GL+RVR F   D + F  + E + +    +  
Sbjct: 121 YIQSYRDLPQRLYQIQAKFRDEPRPR-GGLIRVREFIMKDMYSFDASPEGLDDSYQTMKQ 179

Query: 410 LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
              S+Y+  G E +++   +       S      AE+
Sbjct: 180 AYESVYRRCGLESMVIDADSGAIGGKASHEFMIVAES 216



 Score = 82.5 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 62/164 (37%), Gaps = 10/164 (6%)

Query: 486 AIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFK 543
           A  R  + G I  +   L  RF A + ++     HP+++     G + R +   IE N  
Sbjct: 398 ASKRGVEVGHIFKLGTFLSERFGANFTDAEGV-SHPIIMGCYGMG-VGRLLAAAIEQNHD 455

Query: 544 GNLPLWL---SPIQAIVTT---ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
               +W    +P Q  +           E A++I   L++  + +  D R  T   K  +
Sbjct: 456 EKGIIWPMPIAPYQVYICGLFLDNPVVRESAEKIYKELEAKSIEVLFDDRELTAGVKFND 515

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
             +  IP+ +    +   +  +  +   +  ++ V L   +  +
Sbjct: 516 ADLLGIPLRLTISPRNLDKGGVEFKLRRNKESELVPLDSIVERV 559


>gi|296208047|ref|XP_002750943.1| PREDICTED: probable prolyl-tRNA synthetase, mitochondrial-like
           [Callithrix jacchus]
          Length = 475

 Score =  134 bits (336), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 68/396 (17%), Positives = 131/396 (33%), Gaps = 69/396 (17%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I     G         +  + L+  + ++++    +++N P +    LWQ +  WD    
Sbjct: 80  IYPASPGCYHLLPYTVRAMEKLVRVIDQEMQVIGGQKVNMPSLSPAELWQATNRWDLMGK 139

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPSG 375
            +  ++      +  + + L P +     A+     K SY++LP  L +    +R+EP  
Sbjct: 140 ELLRLRD-----RHGKEYCLGPTHEEAITALIASQKKLSYKQLPFLLYQVTRKFRDEPRP 194

Query: 376 SLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKDFGFEKIM---------- 424
              GL+R R F   D + F  + E        + +   S++   G   +           
Sbjct: 195 RF-GLLRCREFYMKDMYTFDSSPEAAQQTYSLVCDAYCSLFNRLGLRFVKVQANVGSIGG 253

Query: 425 -VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI--------NTGVLLGEGAFY 475
            +    +    +G D L           ++T+  S  +            G+ +G   + 
Sbjct: 254 TMSHEFQLPMDIGEDWLAICPSCSFSANMETLDVSQMNCPACQGPLTKTKGIEVGHTFYL 313

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG-SIERF 534
           G K+                           + F     +    P +     +G  + R 
Sbjct: 314 GTKYS--------------------------SIFNAQFTNVYGKPSLAEMGCYGLGVTRI 347

Query: 535 IGIMIENFKG----NLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSH--------HLS 581
           +   IE          P  L+P QA +      +  E A E+A  L  H        H  
Sbjct: 348 LAAAIEVLSTEDCVRWPSLLAPYQACLIPPKKGSKEEAASELAGQLYDHITEAVPQLHGE 407

Query: 582 IETDFRNE-TINYKIREHSIKKIPIIIICGDKEASE 616
           +  D R   TI  ++++ S    P +II G +   +
Sbjct: 408 VLLDDRTHLTIGNRLKDASKFGYPFVIIAGKRALED 443


>gi|299529723|ref|ZP_07043160.1| prolyl-tRNA synthetase [Comamonas testosteroni S44]
 gi|298722586|gb|EFI63506.1| prolyl-tRNA synthetase [Comamonas testosteroni S44]
          Length = 580

 Score =  134 bits (336), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 49/307 (15%), Positives = 110/307 (35%), Gaps = 13/307 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       ++E   H+ + R   +  +   G+G+  +   G ++ + + + +R 
Sbjct: 3   ASQFLISTLKEAPADAEVVSHKLMMRAGMIKKL---GAGIYNYMPMGLRVIRKVEAIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E   P V    LWQ++G ++     +  ++      +  R F ++P +    
Sbjct: 60  EMNRAGAIETTMPVVQPAELWQETGRFEKMGPELLRIQD-----RHGRDFVIQPTSEEVV 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
             +     KSY++LP  L +  + +R+E      GLMR R F   DA+ F    +     
Sbjct: 115 TDIARQEFKSYKQLPKNLYQIQTKFRDERRPRF-GLMRGREFIMKDAYSFDKDRDAAQIS 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +      I+  FG +   V+  +       S+     A      ++    +     I
Sbjct: 174 YQTMREAYKRIFDRFGLQYRAVRADSGAIGGDLSEEFQVIASTGEDAIVYCPNSDYAANI 233

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI--QVDFNLPSRFNAFYVNSHSEKCHPV 521
                L          + + K A   +  C  +  Q+   L     +  + +       +
Sbjct: 234 EKAESLAPTQARPAAVQAMQKVATPGNSTCEAVAEQLGLPLAQTVKSLVLATDELDDKGL 293

Query: 522 MIHRAVF 528
           ++   V+
Sbjct: 294 IVKSQVW 300



 Score = 81.0 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 23/164 (14%), Positives = 57/164 (34%), Gaps = 7/164 (4%)

Query: 486 AIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           AI R  + G +       S+         + K     +     G        + +N    
Sbjct: 412 AIERGIEIGHVFYLGTKYSKAMEATFLGDNGKPQHFEMGCYGIGVTRLPAAAVEQNHDER 471

Query: 546 LPLWL---SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
             +W    +P   ++  I    + +    A+++   L +  + +  D R+E     + + 
Sbjct: 472 GMIWPDAIAPFTVVICPIGMGRSEAVKTEAEKLYGELLALGVDVILDDRDERPGAMLADW 531

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +  +P  ++ GD+   E  +  ++   T   K++  + +  L 
Sbjct: 532 ELIGVPHRVVLGDRGLKEGVVEYQQRRDTEATKLATNEVLAHLK 575


>gi|288801922|ref|ZP_06407364.1| phosphoribulokinase family protein [Prevotella melaninogenica D18]
 gi|288335964|gb|EFC74397.1| phosphoribulokinase family protein [Prevotella melaninogenica D18]
          Length = 555

 Score =  134 bits (336), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 46/242 (19%), Positives = 96/242 (39%), Gaps = 3/242 (1%)

Query: 1   MPSDIKLTFPDGSI-KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-S 58
           M   + +   +    +  P+ +T SD+ E I+  +    V+  +N KV  L   V     
Sbjct: 3   MRQVLHIRCKNNKKTQEVPIGSTLSDIYEEINLQMPYGPVSAKVNNKVEGLHYRVYHNKD 62

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           +E +    P  +     S   ++ +AV  ++   QV I   + +G+Y +       ++++
Sbjct: 63  VEFLDLLTPSGIRTYTRSLFLVLCKAVHDLYTGSQVVIDIPVSNGYYCNLQLGHEITTED 122

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           + +I  +MQEII    P  +   + E+A ++F    +  K ++L+S         Y   +
Sbjct: 123 VDRIRTRMQEIIDAKMPIQRYETTTEEAVKMFTELGDIQKAKLLKS-SGSLYCVYYVLED 181

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D   G  + +T Q+  F       G   R  S +           +   E+ +  +  
Sbjct: 182 YKDYYYGSMLTNTSQLHLFGLEPYFDGVLLRIPSTQDPSKLGELIRQDKMFEVFKEHHRW 241

Query: 239 EE 240
           + 
Sbjct: 242 QS 243


>gi|38234063|ref|NP_939830.1| prolyl-tRNA synthetase [Corynebacterium diphtheriae NCTC 13129]
 gi|81829888|sp|Q6NGM7|SYP_CORDI RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|38200325|emb|CAE50010.1| prolyl-tRNA synthetase [Corynebacterium diphtheriae]
          Length = 585

 Score =  134 bits (336), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 41/230 (17%), Positives = 88/230 (38%), Gaps = 11/230 (4%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +   A    GV  W   G +  + + + +R ++     +E+  P 
Sbjct: 19  DAEVPSHKLLVRAGYIRRTA---PGVYTWLPLGLRTLRKVETVVREEMDAIGAQELLFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++Q+  W  Y  ++F +K      +    + L P +     +       SY++ 
Sbjct: 76  LLPREPYEQTHRWTEYGDSLFRLKD-----RKGGDYLLGPTHEEMFASAVKDMYSSYKDF 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKD 417
           PV L +  + YR+E      G++R R F   D++ F   +    +  + H      I   
Sbjct: 131 PVTLYQIQTKYRDEERPR-AGILRGREFVMKDSYSFDMSDAGLEDSYQRHREAYQRILDR 189

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGV 467
            G E ++   ++       S+     ++N     +   +      +   V
Sbjct: 190 LGVEYVICAATSGAMGGSASEEFLAVSDNGEDTFVRATEGPYAANVEAVV 239



 Score = 81.0 bits (198), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 33/174 (18%), Positives = 68/174 (39%), Gaps = 12/174 (6%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           P  E      + R  + G I Q+       F+   ++   ++  P M    +   + R +
Sbjct: 411 PAPEGQGTLTLARGIEVGHIFQLGRKYTEAFDVQILDESGKRAIPTMGSYGI--GVSRLM 468

Query: 536 GIMIENFKG----NLPLWLSPIQAIVTTITSS--AVEYAQEIANLLKSHHLSIETDFRNE 589
            ++ E        N PL ++P Q  V        A+E    +   L SH + +  D R +
Sbjct: 469 AVLAEQRHDETGLNWPLEVAPYQVHVVVANKDKEAIEAGDALVAALDSHGIEVLFDDRPK 528

Query: 590 -TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +   K ++  +  +P +++ G +   + +I +R  G   T  VS  + +  + 
Sbjct: 529 VSPGVKFKDAELLGMPFVVVLG-RAFKDGNIELRERG-QETVLVSADEIVDTVV 580


>gi|121593268|ref|YP_985164.1| prolyl-tRNA synthetase [Acidovorax sp. JS42]
 gi|222109990|ref|YP_002552254.1| prolyl-tRNA synthetase [Acidovorax ebreus TPSY]
 gi|152074743|sp|A1W4B3|SYP_ACISJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|254782898|sp|B9ME00|SYP_DIAST RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|120605348|gb|ABM41088.1| prolyl-tRNA synthetase [Acidovorax sp. JS42]
 gi|221729434|gb|ACM32254.1| prolyl-tRNA synthetase [Acidovorax ebreus TPSY]
          Length = 581

 Score =  134 bits (336), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 39/199 (19%), Positives = 81/199 (40%), Gaps = 11/199 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       ++E   H+ + R   +  +   G+G+  +   G ++ + + + +R 
Sbjct: 3   ASQFFISTLKEAPADAEVVSHQLMMRAGLIKKL---GAGIYNYMPMGLRVIRKVEAIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E   P V    LWQ++G +D     +  +       +  R F ++P +    
Sbjct: 60  EMNRAGAVECTMPVVQPAELWQETGRFDKMGPELLRIHD-----RHGRDFVIQPTSEEVV 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    L+SY++LP  L +  + +R+E      GLMR R F   DA+ F   +      
Sbjct: 115 TDIARQELRSYKQLPKNLYQIQTKFRDERRPRF-GLMRGREFIMKDAYSFDRDQAGAKAS 173

Query: 405 LKIH-NLIISIYKDFGFEK 422
            ++       I+  FG   
Sbjct: 174 YQVMAQAYRRIFDRFGLRY 192



 Score = 82.1 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 59/174 (33%), Gaps = 13/174 (7%)

Query: 480 EYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGI 537
           +   + AI R  + G +  +        NA ++    +   P       +G  + R    
Sbjct: 407 DGQGELAIERGIEVGHVFYLGTKYSKAMNATFLGEDGK---PAFFEMGCYGIGVTRLPAA 463

Query: 538 MIENFKGN----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNE 589
            IE          P  ++P   ++  +    + +    A+ +   L +  + +  D R E
Sbjct: 464 AIEQNHDERGIIWPDAIAPFTVVICPVGMDRSEAVKAQAESLYADLLAAGVDVILDDRGE 523

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
                  +  +  +P  +  GDK   E  +  +     +  KV + D +  + +
Sbjct: 524 RPGAMFADWELIGVPHRVTIGDKSLKEGQVEYQHRRDASATKVGVADILAHVKE 577


>gi|260910547|ref|ZP_05917215.1| phosphoribulokinase [Prevotella sp. oral taxon 472 str. F0295]
 gi|260635389|gb|EEX53411.1| phosphoribulokinase [Prevotella sp. oral taxon 472 str. F0295]
          Length = 553

 Score =  134 bits (336), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 43/242 (17%), Positives = 95/242 (39%), Gaps = 3/242 (1%)

Query: 1   MPSDIKLTFPDGSIKN-FPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-S 58
           M   I++   +        + +T  DV   +   +    V   +N K+  +   +     
Sbjct: 1   MKQFIQIRCKNNKKTAKVAIGSTLYDVFHELKLDMPYGPVNAKVNNKIEGMHYRLYHNKD 60

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           +E +    P +      +   ++ +AV  ++P  +V I   + +G+Y D D ++P +  +
Sbjct: 61  VEFLDLHSPSAHRAYTRTLFFVLCKAVHDLYPHSRVVIDIPVSNGYYVDLDIQRPVTPQD 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
              I ++MQ+IIA   P  +   + E A  +F+   +  KV +LE++      T Y+   
Sbjct: 121 ADDIRQRMQQIIAARMPISRHETTTEAAIAMFKKVGDESKVRLLETV-GTLYTTYYQLDR 179

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D   G  + +T +++ F       G   R  S             +   ++ +  +  
Sbjct: 180 YVDYYYGSLLTNTRELRLFGLEPYYDGLLLRVPSASDPSKLGELVPQDKMFDIFKEHHRW 239

Query: 239 EE 240
           + 
Sbjct: 240 QH 241


>gi|225849003|ref|YP_002729167.1| prolyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225644474|gb|ACN99524.1| prolyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 563

 Score =  134 bits (336), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 42/217 (19%), Positives = 92/217 (42%), Gaps = 11/217 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  +        E++   H  L R   +  +A    G+  +   G+++ + + + +R+
Sbjct: 3   ASRYFMPTLKENPSEAQVPSHIYLIRGGFIRSLAA---GIYEYLPLGFRVLKKIENIIRK 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E+  P +    LW+++G WD Y   +F +K   D       FAL P +    
Sbjct: 60  RMDEAGALELLLPILTPAELWKETGRWDVYGKELFRLKDRKDA-----DFALGPTHEETI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    ++SY++LP+   +  + +R+E     +GL+R R F   D + F   E+   + 
Sbjct: 115 TDLVRKNVRSYKDLPLNFYQIQTKFRDEARPR-YGLIRGREFIMKDGYSFDVSEEDAIKT 173

Query: 405 LKIH-NLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            ++       I++D   + +MV+          S   
Sbjct: 174 YEVMKETYHKIFQDLKLDYLMVEADVGAIGGKFSHEF 210



 Score = 66.7 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/152 (17%), Positives = 53/152 (34%), Gaps = 9/152 (5%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL---SPIQ 554
           +         A++ +    K  P+++     G       I+ +       +W    +P  
Sbjct: 410 LGTKYSQAMKAYFTDKDG-KEKPIIMGCYGIGVSRLISAIVEQYHDDKGIIWPDVVAPFD 468

Query: 555 AIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
             +  +      +++   EI    K   L +  D R+ +   K ++  +  IP  I+ G 
Sbjct: 469 LHILVLNVKDEKSLKAGFEIYEKAKRQGLDVLLDERDISPGSKFKDADLIGIPNRIVIG- 527

Query: 612 KEASERSIGIRRFGS-TTTQKVSLLDAIPILT 642
           K  +E  +  +R       Q V LL+    L 
Sbjct: 528 KSLNEGKVEYQRRDKVEEKQLVDLLEIDNFLN 559


>gi|33866303|ref|NP_897862.1| prolyl-tRNA synthetase [Synechococcus sp. WH 8102]
 gi|81835080|sp|Q7U5D6|SYP_SYNPX RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|33639278|emb|CAE08286.1| Prolyl-tRNA synthetase [Synechococcus sp. WH 8102]
          Length = 593

 Score =  134 bits (336), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 54/209 (25%), Positives = 86/209 (41%), Gaps = 8/209 (3%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E   H+ L R   +  +   GSG+  +    WK+ Q + + +R ++      E   PQ
Sbjct: 17  EAEITSHQLLLRGGFIRRV---GSGIYAYLPMMWKVLQRITTIIREEMNRAGALETLLPQ 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W  Y A    +   +D  +  R   L P +     ++    L+SYR+L
Sbjct: 74  LHPSELWQRSGRWQGYTAGEGIMFHLED--RQGRELGLGPTHEEVITSLAGELLRSYRQL 131

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH-NLIISIYKD 417
           PV L +  + +R+E      GLMR R F   DA+ F   E        +       I++ 
Sbjct: 132 PVNLYQVQTKFRDEIRPRF-GLMRGREFIMKDAYSFHADEADLQATYAVMDQAYRRIFER 190

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
            G E + V   +       S      AE 
Sbjct: 191 CGLEAVPVDADSGAIGGAASQEFMVTAEA 219



 Score = 88.3 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 28/166 (16%), Positives = 60/166 (36%), Gaps = 7/166 (4%)

Query: 488 GRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG-- 544
            R  + G I Q+        +  + N +       M    +  S      +   +  G  
Sbjct: 429 KRGIEVGHIFQLGRKYSQALDCCFTNENGRDEPFWMGCYGIGVSRLAQAAVEQHHDDGGI 488

Query: 545 NLPLWLSPIQAIVT---TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             P  ++P + IV        +  +    +   L    + +  D R E    K ++  + 
Sbjct: 489 RWPAAIAPYEVIVVIANNHDDAQTDLGDTVYATLLEAGIDVLLDDRKERAGVKFKDADLI 548

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLP 647
            IP  ++ G ++A+E ++ + +  +   +K+   +AI  L K   P
Sbjct: 549 GIPWRLVIG-RDAAEGTVELVQRSNREMRKLPHGEAIGELLKALRP 593


>gi|118472270|ref|YP_886958.1| prolyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
 gi|302595855|sp|A0QVM0|SYP_MYCS2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|118173557|gb|ABK74453.1| prolyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
          Length = 585

 Score =  134 bits (336), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 59/369 (15%), Positives = 125/369 (33%), Gaps = 40/369 (10%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +  +   G G+  W   G ++ + + + +R ++     +EI  P 
Sbjct: 19  DAEVPSHKLLIRAGYVRAV---GPGIYSWLPLGLRVLRKIENVVRSEMNAIGAQEILLPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++ +  W  Y   +F ++   +       + L P +             SY++ 
Sbjct: 76  LLPRGPYETTNRWTEYGDTLFRLQDRRNN-----DYLLGPTHEELFTLTVKGEYSSYKDF 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKD 417
           PV L +  + YR+E      G++R R F   D++ F    + + N   +       I+  
Sbjct: 131 PVILYQIQTKYRDEARPR-AGILRGREFVMKDSYSFDVDDDGLKNAYYQHREAYQRIFAR 189

Query: 418 FGFEKIMVKLSTRPE-----------KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
            G   ++V   +                VG D      E+     ++ +   + +   T 
Sbjct: 190 LGVRYVIVSAVSGAMGGSASEEFLAESEVGEDTFVRCVESGYAANVEAVITRAPEAQPTE 249

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
            L     +  P    I                  +LP  F    V +     + ++  R 
Sbjct: 250 GLPEAKVYDTPDTPTIA--------TLVEWANSASLPQ-FEGRTVTAADTLKNVLLKTRE 300

Query: 527 VFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITS-SAVEYAQEIA---NLLKSH 578
             G  E  + + +    E  +  L   L P +  +      +A  +  +       L+ +
Sbjct: 301 PGGEWE-LLAVGVPGDREVDEKRLGAALEPAEFALLDDADFAANPFLVKGYVGPKALQDN 359

Query: 579 HLSIETDFR 587
            +    D R
Sbjct: 360 GVRYLVDPR 368



 Score = 77.9 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 25/161 (15%), Positives = 61/161 (37%), Gaps = 10/161 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN----FK 543
           R  + G I Q+       F+A  +    +     M    +   + R + ++ E       
Sbjct: 423 RGIEIGHIFQLGRKYTDAFSADVLGEDGKPLRLTMGSYGI--GVSRLVAVIAEQQHDQLG 480

Query: 544 GNLPLWLSP--IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
              P  ++P  +  +V    + A   A E+   L      +  D R  +   K ++  + 
Sbjct: 481 LRWPSSVAPFDVHVVVANKDAGARAGAAELVADLDRLGHEVLFDDRQASPGVKFKDAELL 540

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +P I++ G +  ++  + +R   +  T++++   A   ++
Sbjct: 541 GMPWIVVVG-RGWADGVVELRNRFTGETREIAADGAAAEIS 580


>gi|73956414|ref|XP_546694.2| PREDICTED: similar to prolyl-tRNA synthetase
           (mitochondrial)(putative) [Canis familiaris]
          Length = 632

 Score =  134 bits (336), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 77/457 (16%), Positives = 143/457 (31%), Gaps = 57/457 (12%)

Query: 191 TGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLA 250
           T           V    +  D  R     +            Q L     S+    +   
Sbjct: 170 TLATCSHQLSGYVPHRCYHCDPERGKRLVLSRMFQPQNLREDQVLSLEGRSDDLTCKSQR 229

Query: 251 REMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSG 309
               +  I     G         +  + L   + ++++    +++N P +    LW+ + 
Sbjct: 230 LMQQVGLIYPASPGCYHLLPYTVRAMEKLQRVIDQEMQAIGGQKVNMPSLSPAELWRATN 289

Query: 310 HWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL-KSYRELPVRLAEFGSV 368
            WD     +  ++      +  + + L P +     A+       SYR+LP  L +    
Sbjct: 290 RWDLMGKELLRLRD-----RHGKEYCLGPTHEEAVTALVASQKTLSYRQLPFLLYQVTRK 344

Query: 369 YRNEPSGSLHGLMRVRGFTQDDAHVFCT-KEQMFNECLKIHNLIISIYKDFGFEKIMVK- 426
           +R+EP     GL+R R F   D + F +  E        +     S+++  G   I V+ 
Sbjct: 345 FRDEPRPRF-GLLRGREFYMKDMYTFDSSPEAARQTYGLVCGAYSSLFRRLGLRCIRVQA 403

Query: 427 ----------LSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
                        +    +G D             ++T++ S  D               
Sbjct: 404 DVGSIGGTASHEFQLPADIGEDRFAVCPSCGFSANMETLRLSQTD--------------C 449

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           P  +  L +A G +    T  +     S FNA + ++    C P  +     G   R + 
Sbjct: 450 PACQSPLTEARGIEV-GHTFYLGTKYSSIFNAQFTDAQGRPC-PAEMGCYGLGVT-RILA 506

Query: 537 IMIENFKG----NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSH------------HL 580
             IE          P  L+P Q  +      + E   E+A  L  H              
Sbjct: 507 AAIEVLSTEDCIRWPGLLAPYQVCLIPPKKGSKE---EVATELTGHLYDLITEAVPQLRG 563

Query: 581 SIETDFRN-ETINYKIREHSIKKIPIIIICGDKEASE 616
            +  D R   TI  ++++ +    P +II G +   +
Sbjct: 564 EVLLDDRTHRTIGNRLKDANKFGYPFVIIAGKRALED 600


>gi|296284112|ref|ZP_06862110.1| prolyl-tRNA synthetase [Citromicrobium bathyomarinum JL354]
          Length = 533

 Score =  134 bits (336), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 57/388 (14%), Positives = 128/388 (32%), Gaps = 74/388 (19%)

Query: 270 RKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKC---- 323
             G+ I++ +   +  +IK   ++    P  +    ++ ++ H + +   M  V      
Sbjct: 62  PWGYGIWERIQRLLDDRIKATGHDNAYFPLFIPLSNFEREADHVEGFAKEMAVVTHHRLI 121

Query: 324 --------ADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
                    D   K      ++P +           ++S+R+LP++L ++ +V R E   
Sbjct: 122 ADGKGGLIPDPEAKLEEPLVVRPTSETIIGDAMARWVQSWRDLPLKLNQWANVVRWEMR- 180

Query: 376 SLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
                +R   F   + H    T E+  +  L +  +  ++ +D     ++       E+ 
Sbjct: 181 -TRMFLRTSEFLWQEGHTAHATPEEAKDHTLTMLEVYRAMAEDDLALPVIAGEKPEHERF 239

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
            G+   W                                      E +++D  G+  Q G
Sbjct: 240 PGAVETWS------------------------------------IEAMMQD--GKALQAG 261

Query: 495 TIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLW 549
           T      N        Y      +      H   +G   R IG +I    ++    +P  
Sbjct: 262 TSHYLGTNFAKASGIKYQAQEGGEQ---FAHTTSWGVSTRLIGGIIMTHGDDDGLRVPPK 318

Query: 550 LSPIQAIVTTI------TSSAVEYAQEIANLL---KSHHL--SIETDFRNETINYKIREH 598
           L+P Q ++  +       ++ +EY + +   L   ++      +  D +      K  + 
Sbjct: 319 LAPWQVVILPMLRGNDDDAALIEYCEGLRATLAGQQALGEPVRVLLDTKPGKPAQKRWDW 378

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGS 626
             K  P+I+  G ++     + + R  +
Sbjct: 379 VRKGAPVIVEVGGRDMENGVVTLIRRDN 406


>gi|213691491|ref|YP_002322077.1| prolyl-tRNA synthetase [Bifidobacterium longum subsp. infantis ATCC
           15697]
 gi|213522952|gb|ACJ51699.1| prolyl-tRNA synthetase [Bifidobacterium longum subsp. infantis ATCC
           15697]
 gi|320457566|dbj|BAJ68187.1| prolyl-tRNA synthase [Bifidobacterium longum subsp. infantis ATCC
           15697]
          Length = 604

 Score =  134 bits (336), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 38/186 (20%), Positives = 77/186 (41%), Gaps = 8/186 (4%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
           +I +   G+  W   G ++   + + +R +I     +E++ P +L +  ++ +  W+ Y 
Sbjct: 36  YIRKAAPGIWTWLPLGLRVLNKIEAIIREEINGIGAQEVHFPALLPREPYEATHRWEEYG 95

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            N+F +K      +    + L P +      +      SY++LPV L +  + YR+E   
Sbjct: 96  DNIFRLKD-----RHEADYLLAPTHEEMFTLLVKDMYSSYKDLPVTLYQIQTKYRDEFRP 150

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNE-CLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              GL+R R F   DA+ F   E+   +           I++    + + V   + P   
Sbjct: 151 R-AGLIRGREFIMKDAYSFTIDEEGMRKAYYDERGAYERIFQRLDLKYVPVFAMSGPMGG 209

Query: 435 VGSDAL 440
             S+  
Sbjct: 210 SASEEF 215



 Score = 74.0 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 22/150 (14%), Positives = 58/150 (38%), Gaps = 12/150 (8%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN- 545
           R  + G + Q+        +   ++ + +    V +    +G  + R +  + E      
Sbjct: 438 RGVEIGQVFQLGLKYSKALDLKVLDQNGKA---VPVWMGCYGIGVSRVLACIAETHHDEA 494

Query: 546 ---LPLWLSPIQAIVTTITSSAVEY--AQEIANLLKSHHLSIETDFRNE-TINYKIREHS 599
               P  ++P    V      AV +  A+++ + L++  L +  D R + +   K ++  
Sbjct: 495 GLAWPSVIAPAAVHVVATGKDAVAFEGAEKLVSELEAKGLEVIYDDRKKVSPGVKFKDAE 554

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           +  +P++ + G    ++ +I +R       
Sbjct: 555 LIGVPLVAVVGRDYVNDGTIELRDRNGENK 584


>gi|289432262|ref|YP_003462135.1| prolyl-tRNA synthetase [Dehalococcoides sp. GT]
 gi|288945982|gb|ADC73679.1| prolyl-tRNA synthetase [Dehalococcoides sp. GT]
          Length = 569

 Score =  134 bits (336), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 49/217 (22%), Positives = 92/217 (42%), Gaps = 11/217 (5%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DD 290
                   ++E   H+ L R      IA+  +GV  +    W+  Q + + +R+++    
Sbjct: 9   KTQREIPSDAETISHQLLLRSGM---IAQLTAGVYSFMPLAWRSIQKIENIIRQEMNKAG 65

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH 350
            +E+  P +    +WQQSG    +   +F +K   D         L P +      + + 
Sbjct: 66  CQELAMPVLQPVEIWQQSGREAPFGQTLFHLKDRKDH-----NLVLGPTHEEVITDLASR 120

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHN 409
            ++SYR+LP RL +  + +R+EP     GL+RVR F   D + F  + E + +    +  
Sbjct: 121 YIQSYRDLPQRLYQIQAKFRDEPRPR-GGLIRVREFIMKDMYSFDASPEGLDDSYQTMKQ 179

Query: 410 LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
              S+Y+  G E +++   +       S      AE+
Sbjct: 180 AYESVYRRCGLESMVIDADSGAIGGKASHEFMIVAES 216



 Score = 82.5 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 62/164 (37%), Gaps = 10/164 (6%)

Query: 486 AIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFK 543
           A  R  + G I  +   L  RF A + ++     HP+++     G + R +   IE N  
Sbjct: 398 ASKRGVEVGHIFKLGTFLSERFGANFTDAEGV-SHPIIMGCYGMG-VGRLLAAAIEQNHD 455

Query: 544 GNLPLWL---SPIQAIVTT---ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
               +W    +P Q  +           E A++I   L++  + +  D R  T   K  +
Sbjct: 456 EKGIIWPMPIAPYQVYICGLFLDNPVVRESAEKIYKELEAKSIEVLFDDRELTAGVKFND 515

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
             +  IP+ +    +   +  +  +   +  ++ V L   +  +
Sbjct: 516 ADLLGIPLRLTISPRNLDKGGVEFKLRRNKESELVPLDSIVERV 559


>gi|77747502|ref|NP_297735.2| prolyl-tRNA synthetase [Xylella fastidiosa 9a5c]
 gi|114152281|sp|Q9PG57|SYP_XYLFA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
          Length = 564

 Score =  134 bits (336), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 43/220 (19%), Positives = 82/220 (37%), Gaps = 11/220 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  L        ++E   HR + R   +  +A   SG+  W   G ++ + + + +R +
Sbjct: 4   SEFHLHTTKEIPADAELVSHRLMLRAGMIRKLA---SGLYTWSPLGLRVLRKVEAIVRDE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P +  + LW++S  W+ +   +  +K           +   P       
Sbjct: 61  MNRAGAVEMLLPTIQPRELWEESERWEKFGNQLLKIKDRKQA-----EYCYSPTAEEAVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF-NEC 404
                 L SY++LPV L +  + +R+E      G+MR R F   DA+ F   +     E 
Sbjct: 116 DYVRQELTSYKQLPVNLYQIQTKFRDEIRPRF-GVMRAREFVMKDAYSFHLNDADLVREY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
             +      I+   G E   V+  +       S      A
Sbjct: 175 ENMRATYTRIFTRLGLEFRAVQADSGAIGGDASQEFHVIA 214



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 55/168 (32%), Gaps = 19/168 (11%)

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
           V+ G+ A  G K        I R  + G + Q+         A  ++ + +    V +  
Sbjct: 387 VIEGDRAVDGGKI------CIARGIEVGHVFQLGRKYAEAMKATVLDEYGKA---VTMTM 437

Query: 526 AVFGS-IERFIGIMIENFKGN----LPLWLSPIQAIVTTITSSAVEY----AQEIANLLK 576
             +G  + R +   IE          P  ++P Q  V  I           A+ +   L+
Sbjct: 438 GCYGIGVSRIVAAAIEQNHDVAGIIWPASIAPWQVAVCVINPKKDPVITAAAEVLLAELQ 497

Query: 577 SHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRF 624
           S  +    D R         +  +  IP  I+  ++  +  +   R  
Sbjct: 498 SADVDTVLDDRGLRPGVMFADMELIGIPHRIVVSERGLAAGTYEYRAR 545


>gi|148241975|ref|YP_001227132.1| prolyl-tRNA synthetase [Synechococcus sp. RCC307]
 gi|166980166|sp|A5GSC0|SYP_SYNR3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|147850285|emb|CAK27779.1| Prolyl-tRNA synthetase [Synechococcus sp. RCC307]
          Length = 600

 Score =  134 bits (336), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 54/222 (24%), Positives = 92/222 (41%), Gaps = 8/222 (3%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E   H+ L R   +  +A   SG+  +    W++ + + + +R+++      E   PQ
Sbjct: 17  EAEIPSHKLLLRGGYIRRVA---SGIYAYLPLMWRVLRKVSAIVRQEMDAAGALETLLPQ 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W  Y A    +    D  +  R   L P +     A+    L+SYR+L
Sbjct: 74  LQPAELWQRSGRWSGYTAGEGIMFHLQD--RQDRELGLGPTHEEVITALAADLLRSYRQL 131

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKD 417
           PV L +  + +R+E      GLMR R F   DA+ F  + E +      +      I+  
Sbjct: 132 PVNLYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSFHASAEDLGRGYAAMDQAYRRIFSR 190

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSS 459
            G + + V+  +       S      AE     +L +   S 
Sbjct: 191 CGLQVVAVQADSGAIGGSASQEFMVTAEAGEDLILSSADGSY 232



 Score = 87.9 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 60/162 (37%), Gaps = 9/162 (5%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I Q+         A + N   +   P+ +     G        + ++      
Sbjct: 432 RGIEVGHIFQLGLKYSEALGATFANEQGQDA-PLWMGCYGIGVSRLAQAAVEQHHDSAGM 490

Query: 548 LWLSPIQA--IVTTITSS----AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W  PI    +V  I SS     VE A+++   L+   + +  D RNE    K ++  + 
Sbjct: 491 VWPVPIAPFEVVIVIASSKEAQQVELAEDLYGQLQQAGVDVLLDDRNERAGVKFKDAELI 550

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            IP  ++ G + A    + +    S   Q+    D +  L +
Sbjct: 551 GIPWRLVVG-RGAVNGQVELVERCSGEKQEGPHQDLMAQLLQ 591


>gi|320008235|gb|ADW03085.1| prolyl-tRNA synthetase [Streptomyces flavogriseus ATCC 33331]
          Length = 565

 Score =  134 bits (336), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 44/216 (20%), Positives = 89/216 (41%), Gaps = 11/216 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++E  +H+ L R   +   A    G+  W   G K+ + +   +R +
Sbjct: 8   SRLMIKTLRDDPADAETLNHKLLVRAGYVRRTAA---GIWSWLPLGKKVLENVTRVVREE 64

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E+  P +L +  ++ SG +D Y   +F ++      +    + L P +     
Sbjct: 65  MDAIGGQEVLLPALLPKEAYEASGRYDEYGDLLFRLQD-----RKGADYLLGPTHEEIFT 119

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            V      SY++LPV L +  + YR+E       L R R F   D++ F T ++   E  
Sbjct: 120 QVVKDMCSSYKDLPVILYQIQTKYRDEARPRAGVL-RGREFQMKDSYSFDTTDEGLAEAY 178

Query: 406 KIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           ++H    I I++  G +  +V   +       S+  
Sbjct: 179 QLHRAAYIRIFERLGLDHRVVSAVSGAMGGSASEEF 214



 Score = 83.3 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 28/165 (16%), Positives = 66/165 (40%), Gaps = 12/165 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           + R  + G I Q+       F+   +    ++  PV +    +G  + R +  + E    
Sbjct: 403 VDRAIEIGHIFQLGRKYADIFSLDVL---GQQGKPVRVTMGSYGIGVSRAVAALAEQTAD 459

Query: 545 N----LPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREH 598
           +     P  ++P    V     +   E A +++  L +  L +  D R   +   K  + 
Sbjct: 460 DKGLCWPREIAPADVHVVAAGKALQTELALDVSEKLNAAGLRVLVDDRAGVSPGVKFTDS 519

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +  +P I++ G + A    + ++   +   +++++ +AI  LT 
Sbjct: 520 ELIGVPKILVAGRRSAE-GVLELKDRRTGEREELTVDEAIARLTD 563


>gi|28199512|ref|NP_779826.1| prolyl-tRNA synthetase [Xylella fastidiosa Temecula1]
 gi|182682245|ref|YP_001830405.1| prolyl-tRNA synthetase [Xylella fastidiosa M23]
 gi|81839496|sp|Q87B25|SYP_XYLFT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226701358|sp|B2I7W6|SYP_XYLF2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|28057627|gb|AAO29475.1| prolyl-tRNA synthetase [Xylella fastidiosa Temecula1]
 gi|182632355|gb|ACB93131.1| prolyl-tRNA synthetase [Xylella fastidiosa M23]
 gi|307578519|gb|ADN62488.1| prolyl-tRNA synthetase [Xylella fastidiosa subsp. fastidiosa GB514]
          Length = 564

 Score =  134 bits (336), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 43/220 (19%), Positives = 83/220 (37%), Gaps = 11/220 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  L        ++E   HR + R   +  +A   SG+  W   G ++ + + + +R +
Sbjct: 4   SEFHLHTTKEIPADAELVSHRLMLRAGMIRKLA---SGLYTWSPLGLRVLRKVEAIVRDE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P +  + LW++S  W+ + + +  +K           +   P       
Sbjct: 61  MNRAGAVEMLLPTIQPRELWEESERWEKFGSQLLKIKDRKQA-----EYCYSPTAEEAVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF-NEC 404
                 L SY++LPV L +  + +R+E      G+MR R F   DA+ F   +     E 
Sbjct: 116 DYVRQELTSYKQLPVNLYQIQTKFRDEIRPRF-GVMRAREFVMKDAYSFHLNDADLVREY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
             +      I+   G E   V+  +       S      A
Sbjct: 175 ENMRATYTRIFTRLGLEFRAVQADSGAIGGDASQEFHVIA 214



 Score = 70.2 bits (170), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 30/186 (16%), Positives = 61/186 (32%), Gaps = 19/186 (10%)

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
           V+ G+ A  G K        I R  + G + Q+         A  ++ + +    V +  
Sbjct: 387 VIEGDRAVDGGKI------CIARGIEVGHVFQLGRKYAEAMKATVLDEYGKA---VTMTM 437

Query: 526 AVFGS-IERFIGIMIENFKGNLPL-WLSPI---QAIVTTITSSAVEY----AQEIANLLK 576
             +G  + R +   IE       + W +PI   Q  V  I           A+ +   L+
Sbjct: 438 GCYGIGVSRIVAAAIEQNHDVAGIIWPAPIAPWQVAVCVINPKKDPVITAAAEMLLAELQ 497

Query: 577 SHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
           S  +    D R         +  +  IP  I+  ++  +  +   R   +   + +    
Sbjct: 498 SADVDTVLDDRGLRPGVMFADMELIGIPHRIVVSERGLAAGTYEYRARRTAMVENLDKTT 557

Query: 637 AIPILT 642
            +  + 
Sbjct: 558 LLTRIK 563


>gi|312134020|ref|YP_004001359.1| pros [Bifidobacterium longum subsp. longum BBMN68]
 gi|311773326|gb|ADQ02814.1| ProS [Bifidobacterium longum subsp. longum BBMN68]
          Length = 604

 Score =  134 bits (336), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 38/186 (20%), Positives = 77/186 (41%), Gaps = 8/186 (4%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
           +I +   G+  W   G ++   + + +R +I     +E++ P +L +  ++ +  W+ Y 
Sbjct: 36  YIRKAAPGIWTWLPLGLRVLNKIEAIIREEINGIGAQEVHFPALLPREPYEATHRWEEYG 95

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            N+F +K      +    + L P +      +      SY++LPV L +  + YR+E   
Sbjct: 96  DNIFRLKD-----RHEADYLLAPTHEEMFTLLVKDMYSSYKDLPVTLYQIQTKYRDEFRP 150

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNE-CLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              GL+R R F   DA+ F   E+   +           I++    + + V   + P   
Sbjct: 151 R-AGLIRGREFVMKDAYSFTIDEEGMRKAYYDERGAYERIFQRLDLKYVPVFAMSGPMGG 209

Query: 435 VGSDAL 440
             S+  
Sbjct: 210 SASEEF 215



 Score = 74.4 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 22/150 (14%), Positives = 57/150 (38%), Gaps = 12/150 (8%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN- 545
           R  + G + Q+        +   ++ + +    V +    +G  + R +  + E      
Sbjct: 438 RGVEIGQVFQLGLKYSKALDLKVLDQNGKA---VPVWMGCYGIGVSRVLACIAETHHDEA 494

Query: 546 ---LPLWLSPIQAIVTTITSSAVEY--AQEIANLLKSHHLSIETDFRNE-TINYKIREHS 599
               P  ++P    V      AV +  A+++   L++  L +  D R + +   K ++  
Sbjct: 495 GLAWPSVIAPAAVHVVATGKDAVAFEGAEKLVAELEAKGLEVIYDDRKKVSPGVKFKDAE 554

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           +  +P++ + G    ++ +I +R       
Sbjct: 555 LIGVPLVAVVGRDYVNDGTIELRDRNGENK 584


>gi|189440768|ref|YP_001955849.1| prolyl-tRNA synthetase [Bifidobacterium longum DJO10A]
 gi|189429203|gb|ACD99351.1| Prolyl-tRNA synthetase [Bifidobacterium longum DJO10A]
          Length = 604

 Score =  134 bits (336), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 38/186 (20%), Positives = 77/186 (41%), Gaps = 8/186 (4%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
           +I +   G+  W   G ++   + + +R +I     +E++ P +L +  ++ +  W+ Y 
Sbjct: 36  YIRKAAPGIWTWLPLGLRVLNKIEAIIREEINGIGAQEVHFPALLPREPYEATHRWEEYG 95

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            N+F +K      +    + L P +      +      SY++LPV L +  + YR+E   
Sbjct: 96  DNIFRLKD-----RHEADYLLAPTHEEMFTLLVKDMYSSYKDLPVTLYQIQTKYRDEFRP 150

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNE-CLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              GL+R R F   DA+ F   E+   +           I++    + + V   + P   
Sbjct: 151 R-AGLIRGREFVMKDAYSFTIDEEGMRKAYYDERGAYERIFQRLDLKYVPVFAMSGPMGG 209

Query: 435 VGSDAL 440
             S+  
Sbjct: 210 SASEEF 215



 Score = 74.4 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 22/150 (14%), Positives = 57/150 (38%), Gaps = 12/150 (8%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN- 545
           R  + G + Q+        +   ++ + +    V +    +G  + R +  + E      
Sbjct: 438 RGVEIGQVFQLGLKYSKALDLKVLDQNGKA---VPVWMGCYGIGVSRVLACIAETHHDEA 494

Query: 546 ---LPLWLSPIQAIVTTITSSAVEY--AQEIANLLKSHHLSIETDFRNE-TINYKIREHS 599
               P  ++P    V      AV +  A+++   L++  L +  D R + +   K ++  
Sbjct: 495 GLAWPSVIAPAAVHVVATGKDAVAFEGAEKLVAELEAKGLEVIYDDRKKVSPGVKFKDAE 554

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           +  +P++ + G    ++ +I +R       
Sbjct: 555 LIGVPLVAVVGRDYVNDGTIELRDRNGENK 584


>gi|283782412|ref|YP_003373167.1| prolyl-tRNA synthetase [Pirellula staleyi DSM 6068]
 gi|283440865|gb|ADB19307.1| prolyl-tRNA synthetase [Pirellula staleyi DSM 6068]
          Length = 503

 Score =  134 bits (336), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 68/436 (15%), Positives = 147/436 (33%), Gaps = 75/436 (17%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
            EE     ++++ R  DL  ++     ++     GW I++ +   +    K   +E    
Sbjct: 10  REEDYPEWYQQVIRAADLAEVSPVRGCMVI-KPWGWSIWENVQKVLDGMFKATGHENAYF 68

Query: 297 PQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKD----------LRTFALKPMNCPGHV 345
           P  +     + ++ H D +      V                        ++P +     
Sbjct: 69  PLFIPMSFLEKEAEHVDGFAKECAVVTHHRLEPGKDGKLVPAGPLEEPLIVRPTSETIIG 128

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           +++   ++SYR+LP+ + ++ +V R E        +R   F   + H   T      E  
Sbjct: 129 SMYAKWVQSYRDLPILINQWANVVRWELR--TRLFLRTTEFLWQEGH---TAHATEEEAR 183

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
           +  + ++ +Y DF                         AEN M   +   + ++ +R   
Sbjct: 184 EETSKMLEVYADF-------------------------AENFMAMPVIKGEKTAGERFP- 217

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIH 524
                 GA      E +++D   +  Q GT   +  N        + + H ++C      
Sbjct: 218 ------GAVQTLSIEAMMQDR--KALQAGTSHFLGQNFAKAQEIKFQDQHGKEC---FAW 266

Query: 525 RAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTIT------SSAVEYAQEIANL 574
              +G   R IG +I    ++    +P  L+P   ++  I       ++ + Y + +   
Sbjct: 267 TTSWGVSTRLIGALIMTHSDDDGLIIPPKLAPKHIVLLPIYRNDEERTAVLAYVKSLKVE 326

Query: 575 LKSHHL-----SIETDFRNETINYKIREHS--IKKIPIIIICGDKEASERSIGIRRFGST 627
           L+S         +  D R+     K        K +P+    G K+ ++  + + R  + 
Sbjct: 327 LESQKYSGESIRVMIDDRDLRGGEK--NWQHVKKGVPLRAEIGPKDIAKNGVFLARRDTG 384

Query: 628 TTQKVSLLDAIPILTK 643
               V   D +  +  
Sbjct: 385 EKVGVGREDLVATIAD 400


>gi|83592514|ref|YP_426266.1| anticodon-binding [Rhodospirillum rubrum ATCC 11170]
 gi|83575428|gb|ABC21979.1| Anticodon-binding [Rhodospirillum rubrum ATCC 11170]
          Length = 387

 Score =  134 bits (336), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 83/407 (20%), Positives = 140/407 (34%), Gaps = 66/407 (16%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           RD   L    +LF     G G  +W  +G  + + +   +R  ++   Y EI TP ++D 
Sbjct: 22  RDPVALGESQELFLWRATGGGNPYWLPRGLTLLRVIEGGLRAWLEAAGYAEIRTPPLVDG 81

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
                                           A +   C  H  V     ++  + P+RL
Sbjct: 82  --------------------------------AFRGGTCAAHRLVHALARRAE-DGPLRL 108

Query: 363 AEFGSVYRNEPSGSLHGLMRVRG------FTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
            E G  +R  P   L G            FT D+AHVFC  +    E  +I     +   
Sbjct: 109 FELGVCHRGGPGEGLLGGAAFTPPAVGTAFTTDEAHVFCPADHCVAEVARIVTASAATLA 168

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
            FGF  I V+  T              A           +   Q  +  G   GEGA  G
Sbjct: 169 AFGFPVIGVRWGT------------ARAGEECPLAAGARRAGYQPGLAAGPA-GEGAPTG 215

Query: 477 PKF-EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
             +  + + D  G  W CG +                        +++   +FGS+E  +
Sbjct: 216 GSWLVFEVDDGAGGAWPCGGL----------TLEGEAIGGAGERAILLCHRLFGSLEAAV 265

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
           G+++    G L  WL+P Q  +   T++     + IA       L +  D   E++  K 
Sbjct: 266 GLLLARGDGWLAPWLAPQQV-LLAGTAAEEAIVRSIAGRFAEAGLRVGADLGAESLGVKR 324

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
                  IP++   G +EA  +++ +        + + +  A+  L+
Sbjct: 325 ARARALGIPVVASLGPREAFSKTVTLSWPDDR-KETLYIEAALARLS 370


>gi|325915741|ref|ZP_08178043.1| prolyl-tRNA synthetase, family II [Xanthomonas vesicatoria ATCC
           35937]
 gi|325538005|gb|EGD09699.1| prolyl-tRNA synthetase, family II [Xanthomonas vesicatoria ATCC
           35937]
          Length = 564

 Score =  133 bits (335), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 43/220 (19%), Positives = 82/220 (37%), Gaps = 11/220 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  L        ++E   HR + R   +  +A   SG+  W   G ++ + + + +R +
Sbjct: 4   SQFHLHTTKETPADAELVSHRLMLRAGMIRKLA---SGLYTWSPLGLRVLRKVEAIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P +  + LW  +G W+ +   +  +       +  + F   P       
Sbjct: 61  MNRAGAVEVLFPTIQPRELWDATGRWEKFGGQLLKISD-----RKQQEFCYSPTAEEAAA 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNEC 404
                 + SY++LP+   +  + +R+E      G+MR R F   DA+ F  T   M  E 
Sbjct: 116 DFARQEINSYKQLPLNFYQIQTKFRDEIRPRF-GVMRAREFLMKDAYSFHLTDADMAREY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
             +      I+   G E   V+  +       S      A
Sbjct: 175 DNMRAAYTRIFTRLGLEFRAVQADSGAIGGDASQEFHVIA 214



 Score = 56.7 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 52/163 (31%), Gaps = 13/163 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGN 545
           R  + G + Q+         A  ++   +   P ++    +G  I R +   IE N    
Sbjct: 403 RGIEVGHVFQLGSQYAQALQATVIDESGK---PAVLKMGCYGIGISRIVAAAIEQNHDDA 459

Query: 546 LPLW---LSPIQAIVTTITSSAVEYAQEIA----NLLKSHHLSIETDFRNETINYKIREH 598
             LW   ++P Q +V  I           A    + L +  L    D R         + 
Sbjct: 460 GILWPAPMAPWQVVVCVINPKQDAQVVAAAQALLDELLAAGLDAALDDRGLRPGAMFADM 519

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            +  IP  ++  ++  +  +   R   +   + +        L
Sbjct: 520 ELLGIPHRVVVSERGLAAGTFEYRARTAEAAENLDKAGLFSRL 562


>gi|315282166|ref|ZP_07870634.1| prolyl-tRNA synthetase [Listeria marthii FSL S4-120]
 gi|313614198|gb|EFR87874.1| prolyl-tRNA synthetase [Listeria marthii FSL S4-120]
          Length = 308

 Score =  133 bits (335), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 46/184 (25%), Positives = 83/184 (45%), Gaps = 11/184 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E + H+ L R   +   A   SG+  +      + + + + +R +++     E+  P 
Sbjct: 17  DAEVKSHQLLLRAGFIRQTA---SGIYSYLPLATLMLRKIETIIREELEAIGAAELLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W+ Y   +  +K      +  R FAL P +     A+    +KSY+ L
Sbjct: 74  LQPAELWQESGRWNDYGPELMRLKD-----RASRDFALGPTHEEVITALLRDEVKSYKRL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKD 417
           P+ L +  + +R+E      GL+R R F   DA+ F  T E +      +H    +I+  
Sbjct: 129 PLTLYQIQTKFRDEKRPRF-GLLRGREFIMKDAYSFHATSESLDEVYNLMHQAYSNIFTR 187

Query: 418 FGFE 421
            G E
Sbjct: 188 CGLE 191


>gi|72161176|ref|YP_288833.1| prolyl-tRNA synthetase [Thermobifida fusca YX]
 gi|114152272|sp|Q47RV7|SYP_THEFY RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|71914908|gb|AAZ54810.1| prolyl-tRNA synthetase, bacterial [Thermobifida fusca YX]
          Length = 582

 Score =  133 bits (335), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 60/365 (16%), Positives = 130/365 (35%), Gaps = 35/365 (9%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +   A    GV  W   G  + + + + +R ++     +E+  P 
Sbjct: 19  DAEVPSHKLLVRGGFVRRTA---PGVYSWLPLGKIVLENVAAVVREEMNRIGAQEVLLPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++ +G W  Y   +F +K      +    + L P +      +      SY++ 
Sbjct: 76  LLPREYYEATGRWTEYGDTLFRLKD-----RKGADYLLGPTHEELFTLLVKGEYTSYKDY 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH-NLIISIYKD 417
           PV L +    +R+E      G++R R F   D++ F   ++      + H    I I+  
Sbjct: 131 PVILYQIQEKFRDEARPR-AGILRGREFHMKDSYSFDLDDEGLQRSYEAHRQAYIRIFDR 189

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
            G E ++VK ++       S+     A       + +  +     +   V         P
Sbjct: 190 LGLEYVIVKATSGAMGGSASEEFLAIAPTGEDTFVRSTGSDYAANVEAVVTPAP-----P 244

Query: 478 K--FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER-F 534
           +   + + +  +       TI+      +        + ++    VM+     G  E   
Sbjct: 245 ERPIDGLPEARVHHTPNTPTIESLVEFLNNAGLGRTFTAADTLKNVMVKTRAPGEKEWEL 304

Query: 535 IGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVEYAQE--IAN------LLKSHHLSI 582
           +GI +    E     L   L+P +  +        ++A+   +         L+++ +  
Sbjct: 305 LGIGVPGDREVDMKRLEASLAPAEVALL----DEEDFAKHPFLVRGYIGPGALQANKVRY 360

Query: 583 ETDFR 587
             D R
Sbjct: 361 LVDPR 365



 Score = 82.9 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 58/163 (35%), Gaps = 12/163 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN- 545
           R  + G + Q+       F+   +    +   PV I    +G  + R +  ++E      
Sbjct: 420 RGIEIGHVFQLGRKYTDAFSLDALGPDGK---PVRITMGSYGIGVSRVVAAIVEQSHDER 476

Query: 546 ---LPLWLSPIQAIVTTITS-SAVEYAQEIANLLKSHHLSIETDFR-NETINYKIREHSI 600
               P  ++P    V        VE A  I+  L    + +  D R   +   K  +  +
Sbjct: 477 GIIWPREVAPADVHVVGTGKGDQVEVALRISQELVDRGVRVLVDDRKGVSPGVKFTDAEL 536

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             +P ++I G +  +   + +R   S    +VS+   +  +  
Sbjct: 537 LGVPTVLIVG-RGLANGVVELRDRASGDRSEVSVDTVVDTIVN 578


>gi|158321035|ref|YP_001513542.1| phosphoribulokinase/uridine kinase [Alkaliphilus oremlandii OhILAs]
 gi|158141234|gb|ABW19546.1| phosphoribulokinase/uridine kinase [Alkaliphilus oremlandii OhILAs]
          Length = 558

 Score =  133 bits (335), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 36/232 (15%), Positives = 94/232 (40%), Gaps = 2/232 (0%)

Query: 16  NFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIR 74
            +    +  ++++    +   + V   ++ ++ +L   +  +  +  +         + +
Sbjct: 21  EYEKGISLEEISKDFGDTYENQIVGAIVDNQLEELGVILSEDCHVRFLEQCSSIGARIYQ 80

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDS 134
            S + +   A   ++   QV++   +  G Y +   ++  + ++  +IE++M+EIIA D 
Sbjct: 81  RSLSFVFIRACMELFSGCQVSVEHSLSKGLYCEIQYKRDLNEEDTKRIEERMREIIAEDV 140

Query: 135 PFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQV 194
           P +K  +  ++A ++F+   +  KV ++     K  + +Y+ G   +   G  V STG +
Sbjct: 141 PLIKSRVPVDEAIDIFKEYGQNGKVNLM-KYRDKPYINIYQCGWLKNYFYGYMVPSTGYL 199

Query: 195 KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDH 246
           KKF       G   +  +                 ++ +      +  + DH
Sbjct: 200 KKFSLKYYSPGIIIQLPTKEANCQIPEFEEQPRLFKIFRETEKWAKILEIDH 251


>gi|146295796|ref|YP_001179567.1| phosphoribulokinase/uridine kinase [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|145409372|gb|ABP66376.1| phosphoribulokinase/uridine kinase [Caldicellulosiruptor
           saccharolyticus DSM 8903]
          Length = 555

 Score =  133 bits (335), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 45/226 (19%), Positives = 88/226 (38%), Gaps = 4/226 (1%)

Query: 16  NFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIR 74
             PV     D+            +A  ++ ++ +L   V ++  I+ I       + + R
Sbjct: 21  EVPVGTVLLDLVPKFQILFKSPIIAAKVDNEIKELKYVVSKDCKIKFIDMTQEDGMRIYR 80

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDS 134
            S   ++  A + ++ E  V +   +  G Y + +  +  S +++  I +KMQEII +D 
Sbjct: 81  RSLIFVLIVATRMLFKEA-VNVQHSLSKGLYCEVE-NRKLSEEDILLIRQKMQEIIEKDI 138

Query: 135 PFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQV 194
           PF ++ ++ E+A +LFES     K   +      ++V +Y  G++ D   G  V STG +
Sbjct: 139 PFRREKVTREEAVKLFESMGYLDKARTV-KFSENDHVYIYYCGDFVDYFYGHMVPSTGYL 197

Query: 195 KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           K F  +    G                         +        +
Sbjct: 198 KIFDLIRYQDGMVLLYPDKSNPFKLQEFVENKKLFAVYHEYKNWGK 243


>gi|71274618|ref|ZP_00650906.1| Prolyl-tRNA synthetase, bacterial [Xylella fastidiosa Dixon]
 gi|170730883|ref|YP_001776316.1| prolyl-tRNA synthetase [Xylella fastidiosa M12]
 gi|226701359|sp|B0U4A7|SYP_XYLFM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|71164350|gb|EAO14064.1| Prolyl-tRNA synthetase, bacterial [Xylella fastidiosa Dixon]
 gi|167965676|gb|ACA12686.1| Proline--tRNA ligase [Xylella fastidiosa M12]
          Length = 564

 Score =  133 bits (335), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 43/220 (19%), Positives = 83/220 (37%), Gaps = 11/220 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  L        ++E   HR + R   +  +A   SG+  W   G ++ + + + +R +
Sbjct: 4   SEFHLHTTKEIPADAELVSHRLMLRAGMIRKLA---SGLYTWSPLGLRVLRKVEAIVRDE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P +  + LW++S  W+ + + +  +K           +   P       
Sbjct: 61  MNRAGAVEMLLPTIQPRELWEESERWEKFGSQLLKIKDRKQA-----EYCYSPTAEEAVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF-NEC 404
                 L SY++LPV L +  + +R+E      G+MR R F   DA+ F   +     E 
Sbjct: 116 DYVRQELTSYKQLPVNLYQIQTKFRDEIRPRF-GVMRAREFVMKDAYSFHLSDADLVREY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
             +      I+   G E   V+  +       S      A
Sbjct: 175 ENMRATYTRIFTRLGLEFRSVQADSGAIGGDASQEFHVIA 214



 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 60/186 (32%), Gaps = 19/186 (10%)

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
           V+ G+ A  G K        I R  + G + Q+         A  ++ + +    V +  
Sbjct: 387 VIEGDRAVDGGKI------CIARGIEVGHVFQLGRKYAEAMKATVLDEYGKA---VTMTM 437

Query: 526 AVFGS-IERFIGIMIENFKGNLPL-WLSPI---QAIVTTITSSAVEYAQEIANLLKSHHL 580
             +G  + R +   IE       + W +PI   Q  V  I           A LL +   
Sbjct: 438 GCYGIGVSRIVAAAIEQNHDVAGIIWPAPIAPWQVAVCVINPKKDPVIIAAAELLLAELQ 497

Query: 581 SIETD----FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
           S + D     R         +  +  IP  I+  ++  +  +   R   +   + +    
Sbjct: 498 SADVDTVLDDRGLRPGVMFADMELIGIPHRIVVSERGLAAGTYEYRARRTAMVENLDKTT 557

Query: 637 AIPILT 642
            +  + 
Sbjct: 558 LLTRIK 563


>gi|309811510|ref|ZP_07705292.1| proline--tRNA ligase [Dermacoccus sp. Ellin185]
 gi|308434561|gb|EFP58411.1| proline--tRNA ligase [Dermacoccus sp. Ellin185]
          Length = 587

 Score =  133 bits (335), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 85/203 (41%), Gaps = 11/203 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +        GV  W   G K+ + + + +R +++    +E++ P 
Sbjct: 19  DAELPGHKLLVRAGYIR---RAAPGVYTWLPLGLKVLRNVETIVREEMEAIGAQELSFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++ +  WD Y  N+F ++      +      L P +             SY++L
Sbjct: 76  LLPREPYEATNRWDEYGPNLFRLQD-----RKGVDMLLGPTHEEMFTITVKDMFSSYKDL 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKD 417
           P  L +  + YR+E      GL+R R F   D++ F  TK+ +     K     + I+  
Sbjct: 131 PTTLFQIQTKYRDEARPR-AGLLRGREFIMKDSYSFDHTKQGLEESYAKHRGAYVKIFDR 189

Query: 418 FGFEKIMVKLSTRPEKRVGSDAL 440
            GFE ++V   +       S+  
Sbjct: 190 LGFEYVVVHADSGAMGGSASEEF 212



 Score = 82.9 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 65/175 (37%), Gaps = 9/175 (5%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           P  +      + R  + G I Q+            ++ + +    V +     G      
Sbjct: 411 PALDGSGPLTLARGIEMGHIFQLGTKYAEALGLKVLDENGKLVT-VTMGSYGIGVSRAVA 469

Query: 536 GIMIENFKGNLPLWL---SPIQAIVTTITSSAV--EYAQEIANLLKSHHLSIETDFRNE- 589
            I  +N      +W    +P    V      A   E A+++   L+S  L +  D R + 
Sbjct: 470 AIAEDNLDDKGLIWPRHIAPFDVHVVATGKDAAVFEKAEQVVADLESAGLGVLFDDRPKV 529

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +   K ++  +  +P I++ G +  S+ +I ++   S T++ V + +    +  E
Sbjct: 530 SPGVKFKDAELIGVPTIVVLG-RGLSDGTIEVKDRRSGTSRDVGVDEVAAEVLSE 583


>gi|163781697|ref|ZP_02176697.1| prolyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159882917|gb|EDP76421.1| prolyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 570

 Score =  133 bits (335), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 46/203 (22%), Positives = 84/203 (41%), Gaps = 11/203 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E   HR L +   +  ++     +      GW++ + + S +R+++     +E+    
Sbjct: 17  EAEAPSHRLLLKAGFIKQVSAGIYEI---LPAGWRVIRKIESIVRKEMDRSGAQELLLTV 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW+++G WD+Y   +F +K      +  R + L P +      +    + SYR+L
Sbjct: 74  LNPAELWKETGRWDTYGNELFRLKD-----RSGREYCLGPTHEEEITDLVRKVVHSYRQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL-IISIYKD 417
           PV L +    +R+E      GL+R R F   DA+ F   E       +        ++K 
Sbjct: 129 PVTLYQIQVKFRDEKRPRF-GLIRGREFIMKDAYSFDADEFSATMSYENMKFAYDRVFKK 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDAL 440
              E IM + ST       S   
Sbjct: 188 LRLEVIMAQASTGQIGGKQSHEF 210



 Score = 91.0 bits (224), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 37/235 (15%), Positives = 82/235 (34%), Gaps = 24/235 (10%)

Query: 436 GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI------------L 483
           G   LWD++   +K ++  +       IN     G    YG   +               
Sbjct: 341 GVKVLWDNSLYGVKNMVVALNEPDYHYINA--NPGRDYQYGEFVDVAEVVEGDPCPQCGS 398

Query: 484 KDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
              + R  + G I +          A++ +    +  P+++     G       I+ +  
Sbjct: 399 PLKVKRGLELGHIFLLGTRYSEPMKAYFTDPEGNEK-PIIMGCYGIGISRIMSAIVEQYH 457

Query: 543 KGNLPLWLSPIQA-----IVTTITSSAV-EYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                 W +P+       I   ++ S + E A+++    +   + +  D R E+  +K  
Sbjct: 458 DDKGIKWPTPVAPFELEIICLNMSDSQMTEVAEKLYLEAEEKGIEVIYDDREESAGFKFA 517

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
           +  +   P  I+ G K   E  + +++  +     V + + I  + KE +  D +
Sbjct: 518 DADLVGFPYRIVVGRK-VKEGKVELQKRATGEKLDVPVEEVIDRV-KEMIAEDKK 570


>gi|148698861|gb|EDL30808.1| prolyl-tRNA synthetase (mitochondrial)(putative), isoform CRA_a
           [Mus musculus]
 gi|148698862|gb|EDL30809.1| prolyl-tRNA synthetase (mitochondrial)(putative), isoform CRA_a
           [Mus musculus]
          Length = 475

 Score =  133 bits (335), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 63/386 (16%), Positives = 126/386 (32%), Gaps = 49/386 (12%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I     G         +  + L+  + ++++    ++IN P +    LW+ +  WD    
Sbjct: 80  ILPASPGCYHLMPYTVRAVEKLVRVIDQEMQAIGGQKINMPSLSPAELWRATSRWDLMGR 139

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPSG 375
            +  ++      +  + + L P +     A+     K SY++LP+ L +    +R+EP  
Sbjct: 140 ELLRLRD-----RHGKEYCLGPTHEEAVTALVASQKKLSYKQLPLLLYQVTRKFRDEPRP 194

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKDFGFEKIMVKLSTRPEKR 434
              GL+R R F   D + F +  +   E   +       ++   G + +  +        
Sbjct: 195 RF-GLLRGREFYMKDMYTFDSSSEAAQETYGLVCDAYCRLFDRLGLQWMKARADVGSIGG 253

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY------ILKDAIG 488
             S                   +  +DR+    ++     +    E       I  D  G
Sbjct: 254 TMSHEF------------QLPVDIGEDRL----VVCPSCHFSANTEILDLSQKICPDCQG 297

Query: 489 RDWQCGTIQVDFNLP---SRFNAFYVNSHSEKCHPVMIHRAVFG-SIERFIGIMIENFKG 544
              +   I+V           + F     +     ++     +G  + R +   IE    
Sbjct: 298 PLTETKGIEVGHTFYLGTKYSSIFNALFTNAHGESLLAEMGCYGLGVTRILAAAIEVLST 357

Query: 545 ----NLPLWLSPIQAIVTTITSSAVEYAQ-EIANLLKSH--------HLSIETDFRNE-T 590
                 P  L+P Q  V      + E A  EI   L              +  D R   T
Sbjct: 358 EDCIRWPRLLAPYQVCVIPPKKGSKETAATEIVEKLYDDVMEAVPQLRGEVLLDDRTHLT 417

Query: 591 INYKIREHSIKKIPIIIICGDKEASE 616
           I  ++++ +    P +II G +   +
Sbjct: 418 IGNRLKDANKLGYPFVIIAGKRALED 443


>gi|139948914|ref|NP_001077356.1| probable prolyl-tRNA synthetase, mitochondrial isoform 2 [Mus
           musculus]
 gi|159575933|emb|CAP19280.1| prolyl-tRNA synthetase (mitochondrial)(putative) [Mus musculus]
          Length = 511

 Score =  133 bits (335), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 63/386 (16%), Positives = 126/386 (32%), Gaps = 49/386 (12%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I     G         +  + L+  + ++++    ++IN P +    LW+ +  WD    
Sbjct: 116 ILPASPGCYHLMPYTVRAVEKLVRVIDQEMQAIGGQKINMPSLSPAELWRATSRWDLMGR 175

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPSG 375
            +  ++      +  + + L P +     A+     K SY++LP+ L +    +R+EP  
Sbjct: 176 ELLRLRD-----RHGKEYCLGPTHEEAVTALVASQKKLSYKQLPLLLYQVTRKFRDEPRP 230

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKDFGFEKIMVKLSTRPEKR 434
              GL+R R F   D + F +  +   E   +       ++   G + +  +        
Sbjct: 231 RF-GLLRGREFYMKDMYTFDSSSEAAQETYGLVCDAYCRLFDRLGLQWMKARADVGSIGG 289

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY------ILKDAIG 488
             S                   +  +DR+    ++     +    E       I  D  G
Sbjct: 290 TMSHEF------------QLPVDIGEDRL----VVCPSCHFSANTEILDLSQKICPDCQG 333

Query: 489 RDWQCGTIQVDFNLP---SRFNAFYVNSHSEKCHPVMIHRAVFG-SIERFIGIMIENFKG 544
              +   I+V           + F     +     ++     +G  + R +   IE    
Sbjct: 334 PLTETKGIEVGHTFYLSTKYSSIFNALFTNAHGESLLAEMGCYGLGVTRILAAAIEVLST 393

Query: 545 ----NLPLWLSPIQAIVTTITSSAVEYAQ-EIANLLKSH--------HLSIETDFRNE-T 590
                 P  L+P Q  V      + E A  EI   L              +  D R   T
Sbjct: 394 EDCIRWPRLLAPYQVCVIPPKKGSKETAATEIVEKLYDDIMEAVPQLRGEVLLDDRTHLT 453

Query: 591 INYKIREHSIKKIPIIIICGDKEASE 616
           I  ++++ +    P +II G +   +
Sbjct: 454 IGNRLKDANKLGYPFVIIAGKRALED 479


>gi|139948347|ref|NP_758476.2| probable prolyl-tRNA synthetase, mitochondrial isoform 1 [Mus
           musculus]
 gi|123239922|emb|CAM27480.1| prolyl-tRNA synthetase (mitochondrial)(putative) [Mus musculus]
          Length = 475

 Score =  133 bits (335), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 63/386 (16%), Positives = 126/386 (32%), Gaps = 49/386 (12%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I     G         +  + L+  + ++++    ++IN P +    LW+ +  WD    
Sbjct: 80  ILPASPGCYHLMPYTVRAVEKLVRVIDQEMQAIGGQKINMPSLSPAELWRATSRWDLMGR 139

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPSG 375
            +  ++      +  + + L P +     A+     K SY++LP+ L +    +R+EP  
Sbjct: 140 ELLRLRD-----RHGKEYCLGPTHEEAVTALVASQKKLSYKQLPLLLYQVTRKFRDEPRP 194

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKDFGFEKIMVKLSTRPEKR 434
              GL+R R F   D + F +  +   E   +       ++   G + +  +        
Sbjct: 195 RF-GLLRGREFYMKDMYTFDSSSEAAQETYGLVCDAYCRLFDRLGLQWMKARADVGSIGG 253

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY------ILKDAIG 488
             S                   +  +DR+    ++     +    E       I  D  G
Sbjct: 254 TMSHEF------------QLPVDIGEDRL----VVCPSCHFSANTEILDLSQKICPDCQG 297

Query: 489 RDWQCGTIQVDFNLP---SRFNAFYVNSHSEKCHPVMIHRAVFG-SIERFIGIMIENFKG 544
              +   I+V           + F     +     ++     +G  + R +   IE    
Sbjct: 298 PLTETKGIEVGHTFYLSTKYSSIFNALFTNAHGESLLAEMGCYGLGVTRILAAAIEVLST 357

Query: 545 ----NLPLWLSPIQAIVTTITSSAVEYAQ-EIANLLKSH--------HLSIETDFRNE-T 590
                 P  L+P Q  V      + E A  EI   L              +  D R   T
Sbjct: 358 EDCIRWPRLLAPYQVCVIPPKKGSKETAATEIVEKLYDDIMEAVPQLRGEVLLDDRTHLT 417

Query: 591 INYKIREHSIKKIPIIIICGDKEASE 616
           I  ++++ +    P +II G +   +
Sbjct: 418 IGNRLKDANKLGYPFVIIAGKRALED 443


>gi|20071917|gb|AAH27073.1| Pars2 protein [Mus musculus]
          Length = 397

 Score =  133 bits (335), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 63/386 (16%), Positives = 126/386 (32%), Gaps = 49/386 (12%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I     G         +  + L+  + ++++    ++IN P +    LW+ +  WD    
Sbjct: 2   ILPASPGCYHLMPYTVRAVEKLVRVIDQEMQAIGGQKINMPSLSPAELWRATSRWDLMGR 61

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPSG 375
            +  ++      +  + + L P +     A+     K SY++LP+ L +    +R+EP  
Sbjct: 62  ELLRLRD-----RHGKEYCLGPTHEEAVTALVASQKKLSYKQLPLLLYQVTRKFRDEPRP 116

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKDFGFEKIMVKLSTRPEKR 434
              GL+R R F   D + F +  +   E   +       ++   G + +  +        
Sbjct: 117 RF-GLLRGREFYMKDMYTFDSSSEAAQETYGLVCDAYCRLFDRLGLQWMKARADVGSIGG 175

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY------ILKDAIG 488
             S                   +  +DR+    ++     +    E       I  D  G
Sbjct: 176 TMSHEF------------QLPVDIGEDRL----VVCPSCHFSANTEILDLSQKICPDCQG 219

Query: 489 RDWQCGTIQVDFNLP---SRFNAFYVNSHSEKCHPVMIHRAVFG-SIERFIGIMIENFKG 544
              +   I+V           + F     +     ++     +G  + R +   IE    
Sbjct: 220 PLTETKGIEVGHTFYLSTKYSSIFNALFTNAHGESLLAEMGCYGLGVTRILAAAIEVLST 279

Query: 545 ----NLPLWLSPIQAIVTTITSSAVEYAQ-EIANLLKSH--------HLSIETDFRNE-T 590
                 P  L+P Q  V      + E A  EI   L              +  D R   T
Sbjct: 280 EDCIRWPRLLAPYQVCVIPPKKGSKETAATEIVEKLYDDIMEAVPQLRGEVLLDDRTHLT 339

Query: 591 INYKIREHSIKKIPIIIICGDKEASE 616
           I  ++++ +    P +II G +   +
Sbjct: 340 IGNRLKDANKLGYPFVIIAGKRALED 365


>gi|325923311|ref|ZP_08184984.1| prolyl-tRNA synthetase, family II [Xanthomonas gardneri ATCC 19865]
 gi|325546238|gb|EGD17419.1| prolyl-tRNA synthetase, family II [Xanthomonas gardneri ATCC 19865]
          Length = 564

 Score =  133 bits (335), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 45/220 (20%), Positives = 84/220 (38%), Gaps = 11/220 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  L        ++E   HR + R   +  +A   SG+  W   G ++ + + + +R +
Sbjct: 4   SQFHLHTTKETPADAELVSHRLMLRAGMIRKLA---SGLYTWSPLGLRVLRKVEAIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P +  + LW  +G W+ +   +  +K   +     + F   P       
Sbjct: 61  MNRAGAVEVLFPTIQPRELWDATGRWEKFGGQLLKIKDRKE-----QEFCYSPTAEEAAA 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNEC 404
                 + SY++LP+   +  + +R+E      G+MR R F   DA+ F  T E M  E 
Sbjct: 116 EFARQEINSYKQLPLNFYQIQTKFRDEIRPRF-GVMRAREFLMKDAYSFHLTDEDMAREY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
             +      I+   G E   V+  +       S      A
Sbjct: 175 DNMRAAYTRIFTRLGLEFRAVQADSGAIGGDASQEFHVIA 214



 Score = 76.0 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 23/165 (13%), Positives = 54/165 (32%), Gaps = 13/165 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGN 545
           R  + G + Q+         A  ++ + +     ++    +G  I R +   IE N    
Sbjct: 403 RGIEVGHVFQLGSQYAQALQATVIDENGKL---AVMKMGCYGIGISRIVAAAIEQNHDEA 459

Query: 546 LPLW---LSPIQAIVTTITSSAVEY----AQEIANLLKSHHLSIETDFRNETINYKIREH 598
             +W   ++P Q +V  I           A  + + L +  +    D R         + 
Sbjct: 460 GIIWPAPMAPWQVVVCVINPKQDPQVIAAAGALLDELIAAGIEAALDDRGLRPGAMFADM 519

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +  IP  ++  ++  +  +   R   +   + +        L +
Sbjct: 520 ELLGIPHRVVVSERGLAAGTFEYRARTAEAAENLDKAGLFSRLER 564


>gi|310641908|ref|YP_003946666.1| prolyl-tRNA synthetase 1 [Paenibacillus polymyxa SC2]
 gi|309246858|gb|ADO56425.1| Prolyl-tRNA synthetase 1 [Paenibacillus polymyxa SC2]
          Length = 581

 Score =  133 bits (335), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 48/222 (21%), Positives = 87/222 (39%), Gaps = 12/222 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  LT       E+E   H+ + R   +  +A    G+  +   G ++ + +   +R +
Sbjct: 4   SQLLLTTLREAPAEAEVISHQLMLRAGFIRQLAA---GMYTYMPLGRRVLRKVEQIVRDE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P +    LWQ+SG +D Y   +  ++   D     R FAL P +     
Sbjct: 61  MDRAGAGELLMPVLQPTELWQESGRYDVYGPELMRLQDRHD-----REFALGPTHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           ++  + + SYR+LPV L +  + +R+E      GL+R R F   DA+ F       +   
Sbjct: 116 SLIRNEVNSYRKLPVTLYQIQTKFRDERRPRF-GLLRSREFLMKDAYSFDANWAGLDHTY 174

Query: 406 -KIHNLIISIYKDFGFEKIMVKLSTRPEKRVG-SDALWDDAE 445
             +      I+         V+         G +      AE
Sbjct: 175 WTMFQAYQRIFTRCSLNFRAVEADAGAIGGEGETHEFMALAE 216



 Score = 83.7 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 27/161 (16%), Positives = 64/161 (39%), Gaps = 9/161 (5%)

Query: 484 KDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           K  + R  + G +  +      +  A ++++       +++     G       I+ +N 
Sbjct: 413 KLELHRGIEIGHVFKLGTKYSEKLGATFLDASGTDQV-MIMGCYGIGVSRILSAIVEQNH 471

Query: 543 KGNLPLW---LSPIQAIVTTITSS---AVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
             N  +W   L+P Q  +  I+      ++ A+++ + L+   + +  D R E    K +
Sbjct: 472 DQNGMIWPHALAPFQVHIIPISVKDRLQMQIAEDLYSQLQDRGVEVLLDDREERPGVKFK 531

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
           +  +  IP  I+ G K+A    +      S+  + + + D 
Sbjct: 532 DSDLVGIPARIVVG-KDAEHGKVEFVERRSSHKESIHIHDV 571


>gi|322689774|ref|YP_004209508.1| prolyl-tRNA synthase [Bifidobacterium longum subsp. infantis 157F]
 gi|322691722|ref|YP_004221292.1| prolyl-tRNA synthase [Bifidobacterium longum subsp. longum JCM
           1217]
 gi|320456578|dbj|BAJ67200.1| prolyl-tRNA synthase [Bifidobacterium longum subsp. longum JCM
           1217]
 gi|320461110|dbj|BAJ71730.1| prolyl-tRNA synthase [Bifidobacterium longum subsp. infantis 157F]
          Length = 614

 Score =  133 bits (335), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 38/186 (20%), Positives = 77/186 (41%), Gaps = 8/186 (4%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
           +I +   G+  W   G ++   + + +R +I     +E++ P +L +  ++ +  W+ Y 
Sbjct: 46  YIRKAAPGIWTWLPLGLRVLNKIEAIIREEINGIGAQEVHFPALLPREPYEATHRWEEYG 105

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            N+F +K      +    + L P +      +      SY++LPV L +  + YR+E   
Sbjct: 106 DNIFRLKD-----RHEADYLLAPTHEEMFTLLVKDMYSSYKDLPVTLYQIQTKYRDEFRP 160

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNE-CLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              GL+R R F   DA+ F   E+   +           I++    + + V   + P   
Sbjct: 161 R-AGLIRGREFVMKDAYSFTIDEEGMRKAYYDERGAYERIFQRLDLKYVPVFAMSGPMGG 219

Query: 435 VGSDAL 440
             S+  
Sbjct: 220 SASEEF 225



 Score = 74.4 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 22/150 (14%), Positives = 57/150 (38%), Gaps = 12/150 (8%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN- 545
           R  + G + Q+        +   ++ + +    V +    +G  + R +  + E      
Sbjct: 448 RGVEIGQVFQLGLKYSKALDLKVLDQNGKA---VPVWMGCYGIGVSRVLACIAETHHDEA 504

Query: 546 ---LPLWLSPIQAIVTTITSSAVEY--AQEIANLLKSHHLSIETDFRNE-TINYKIREHS 599
               P  ++P    V      AV +  A+++   L++  L +  D R + +   K ++  
Sbjct: 505 GLAWPSVIAPAAVHVVATGKDAVAFEGAEKLVAELEAKGLEVIYDDRKKVSPGVKFKDAE 564

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           +  +P++ + G    ++ +I +R       
Sbjct: 565 LIGVPLVAVVGRDYVNDGTIELRDRNGENK 594


>gi|23466273|ref|NP_696876.1| prolyl-tRNA synthetase [Bifidobacterium longum NCC2705]
 gi|227546627|ref|ZP_03976676.1| prolyl-tRNA synthetase [Bifidobacterium longum subsp. infantis ATCC
           55813]
 gi|81847214|sp|Q8G3N0|SYP_BIFLO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|23327022|gb|AAN25512.1| prolyl-tRNA synthetase [Bifidobacterium longum NCC2705]
 gi|227212944|gb|EEI80823.1| prolyl-tRNA synthetase [Bifidobacterium longum subsp. infantis ATCC
           55813]
 gi|291516313|emb|CBK69929.1| prolyl-tRNA synthetase, family II [Bifidobacterium longum subsp.
           longum F8]
          Length = 597

 Score =  133 bits (335), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 38/186 (20%), Positives = 77/186 (41%), Gaps = 8/186 (4%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
           +I +   G+  W   G ++   + + +R +I     +E++ P +L +  ++ +  W+ Y 
Sbjct: 29  YIRKAAPGIWTWLPLGLRVLNKIEAIIREEINGIGAQEVHFPALLPREPYEATHRWEEYG 88

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            N+F +K      +    + L P +      +      SY++LPV L +  + YR+E   
Sbjct: 89  DNIFRLKD-----RHEADYLLAPTHEEMFTLLVKDMYSSYKDLPVTLYQIQTKYRDEFRP 143

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNE-CLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              GL+R R F   DA+ F   E+   +           I++    + + V   + P   
Sbjct: 144 R-AGLIRGREFVMKDAYSFTIDEEGMRKAYYDERGAYERIFQRLDLKYVPVFAMSGPMGG 202

Query: 435 VGSDAL 440
             S+  
Sbjct: 203 SASEEF 208



 Score = 74.4 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 22/150 (14%), Positives = 57/150 (38%), Gaps = 12/150 (8%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN- 545
           R  + G + Q+        +   ++ + +    V +    +G  + R +  + E      
Sbjct: 431 RGVEIGQVFQLGLKYSKALDLKVLDQNGKA---VPVWMGCYGIGVSRVLACIAETHHDEA 487

Query: 546 ---LPLWLSPIQAIVTTITSSAVEY--AQEIANLLKSHHLSIETDFRNE-TINYKIREHS 599
               P  ++P    V      AV +  A+++   L++  L +  D R + +   K ++  
Sbjct: 488 GLAWPSVIAPAAVHVVATGKDAVAFEGAEKLVAELEAKGLEVIYDDRKKVSPGVKFKDAE 547

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           +  +P++ + G    ++ +I +R       
Sbjct: 548 LIGVPLVAVVGRDYVNDGTIELRDRNGENK 577


>gi|331701343|ref|YP_004398302.1| Prolyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
 gi|329128686|gb|AEB73239.1| Prolyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
          Length = 569

 Score =  133 bits (335), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 47/220 (21%), Positives = 93/220 (42%), Gaps = 11/220 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  +       + +E   H+ L R   +  I+    G+  +    +++   + + +R++
Sbjct: 4   SQMLIPTLKETPKGAEALSHQMLVRGGYIRQISA---GMYAYLPLAYRVLNKIETIIRQE 60

Query: 287 IKDD-YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++     E+  P +L   LW++SG +D+Y   +F  K   +T      F L P +     
Sbjct: 61  MEKTSAHEMLMPDILPADLWKESGRYDTYGPELFKFKNRHET-----DFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT-KEQMFNEC 404
           A+    +KSY++LP+ L +  + YR+E     +GL+R R F   DA+ F T  E +    
Sbjct: 116 ALIRDSIKSYKQLPLVLYQIQNKYRDENRPR-YGLLRSREFIMKDAYSFATNDEDLDKTY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
             +     +I+   G +  ++           S      A
Sbjct: 175 NAMEQAYRNIFDRIGLKYKVIIGDGGAMGGSDSKEFSAMA 214



 Score = 79.4 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 60/161 (37%), Gaps = 7/161 (4%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPL 548
           R  + G I       S+     V   + +  PV++     G       I  +N   N  +
Sbjct: 404 RGIEIGHIFKLGTRYSKSLKANVLDENGRAVPVIMGSYGIGVSRLLSAISEQNADENGLV 463

Query: 549 WL---SPIQAIVTTITSS---AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
           W    +P    V  I +     ++ A +I   L +  L +  D R E    K  +  +  
Sbjct: 464 WPKAVAPFDVHVIPINAKKAVQMDLAHQIEAQLTADQLQVLVDDRKERAGVKFADSDLMG 523

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           IP+ +  G K A E  + I+   +  T +V++ +    + K
Sbjct: 524 IPLRVTIGKK-AEEGIVEIKIRKTGETVEVNVTELSDTIKK 563


>gi|310658401|ref|YP_003936122.1| phosphoribulokinase/uridine kinase [Clostridium sticklandii DSM
           519]
 gi|308825179|emb|CBH21217.1| Phosphoribulokinase/uridine kinase [Clostridium sticklandii]
          Length = 554

 Score =  133 bits (335), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 47/271 (17%), Positives = 95/271 (35%), Gaps = 16/271 (5%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
           M   I +T   G  K    + T   +                +N  + +LS  + E S +
Sbjct: 1   MIVLITITTQSGEFK-VEKNTTLEQILSMERMDFLYPVTLGLVNNNLRELSYELEEDSFV 59

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
             I   DP        S   +   A++ + P     I   + +GF+ + + E+  + D++
Sbjct: 60  NWIDITDPDGRRTYMRSLTFLFIRALEELLPGAVTKIQHSLSNGFFCEVEYEEKLNVDDV 119

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +IE +M+E +  +   ++  +  E+A  +++ +    K+ +L        V LYR G  
Sbjct: 120 QKIELRMREFVDSNEKIIRFRVPKEEAINIYKKQNREGKLNLL-KYKNTSTVHLYRCGWL 178

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            D   G  V ST  +  F   +   G    G   +               ++ +      
Sbjct: 179 EDYFYGYMVPSTAMLHTFSLRLYNDGIVLLGPDIKEPHKVSRFIHQPKLFKIYKEAKRWA 238

Query: 240 ES-------------EKRDHRKLAREMDLFH 257
           +              E  +H ++ R  + +H
Sbjct: 239 KIINLPNAASLNILVENNNHPEIIRLAEAYH 269


>gi|297562530|ref|YP_003681504.1| prolyl-tRNA synthetase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296846978|gb|ADH68998.1| prolyl-tRNA synthetase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 582

 Score =  133 bits (335), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 45/273 (16%), Positives = 98/273 (35%), Gaps = 29/273 (10%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R      +     GV  W   G  + + +   +R ++     +E+  P 
Sbjct: 19  DAEVPSHKLLVRGG---FVRRAAPGVYTWLPLGKIVLENVARIVREEMDAIGAQEVLLPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++ +G W+ Y   +F +K      +    + L P +      +      SY++ 
Sbjct: 76  LLPREYYEATGRWEEYGDTLFRLKD-----RKGADYLLGPTHEELFTLLVKGEYSSYKDF 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKD 417
           PV L +    +R+E       L R R F   D++ F   ++        H    I ++  
Sbjct: 131 PVTLYQIQEKFRDEARPRAGVL-RGREFHMKDSYSFDIDDEGLRASYADHRAAYIRVFDR 189

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDA-----------ENIMKGVLDTIKNSSQDRINTG 466
            G E ++V  ++       S+     A           E+     ++ +   + + +   
Sbjct: 190 LGLEYVIVSATSGAMGGSASEEFLAVAPTGEDTFVRSTESDYAANVEAVAVPAPEALPVE 249

Query: 467 VLLGEGAFYGPK-------FEYILKDAIGRDWQ 492
            L      + P         +++    +GRD+ 
Sbjct: 250 GLPEAAVHHTPDTATIQTLVDFLNGAGLGRDFS 282



 Score = 78.7 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 26/159 (16%), Positives = 57/159 (35%), Gaps = 10/159 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G I Q+       F    +    +     M    +   + R +  ++E    +  
Sbjct: 420 RGIEIGHIFQLGRKYTDAFQVDALGPDGKPRRITMGSYGI--GVSRAVAAVVEQSHDDKG 477

Query: 546 --LPLWLSPIQAIVTTITS-SAVEYAQEIANLLKSHHLSIETDFR-NETINYKIREHSIK 601
              P  ++P    V        +E A  IA  L++  L +  D R   +   K  +  + 
Sbjct: 478 VVWPREVAPADVHVVGTGKGEQIEEALRIARELEARGLRVLVDDRKGVSPGVKFTDAELL 537

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
            +P  +I G +   +  + +R   +   ++V+L + +  
Sbjct: 538 GVPTGVIVG-RGLKDGLVELRDRATGDREEVALAEIVDR 575


>gi|311739686|ref|ZP_07713521.1| proline--tRNA ligase [Corynebacterium pseudogenitalium ATCC 33035]
 gi|311305502|gb|EFQ81570.1| proline--tRNA ligase [Corynebacterium pseudogenitalium ATCC 33035]
          Length = 589

 Score =  133 bits (335), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 42/235 (17%), Positives = 89/235 (37%), Gaps = 11/235 (4%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +  +A    GV  W   G +  + +   +R+++     +E+  P 
Sbjct: 19  DAEVPSHKLLVRAGYVRRVA---PGVYTWLPLGLRTLRKIEDVVRQEMDAIGGQEMLFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++++  W  Y  N+F +K   +         L P +     +       SY++ 
Sbjct: 76  LLPREPYEKTNRWVEYGDNLFRLKDRKNA-----DMLLGPTHEEMFASAVKDMYSSYKDF 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKD 417
           PV L +  + YR+E       L R R FT  D++ F   ++  +E    H     +I+  
Sbjct: 131 PVTLYQIQTKYRDEERPRAGVL-RGREFTMKDSYSFDMTDEGLDESYGRHRKAYQNIFNR 189

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
              +  + K ++       S+     +E      + + +      +   V     
Sbjct: 190 LEIDYAICKATSGAMGGSASEEFLAVSEVGEDTFVRSTEGDYAANVEAVVTPAPA 244



 Score = 84.1 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 66/163 (40%), Gaps = 12/163 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE----NFK 543
           R  + G I Q+       F+   ++ + ++  P M    +   I R + ++ E    +  
Sbjct: 427 RGIELGHIFQLGRKYTEAFDVQILDENGKRAVPTMGSYGI--GITRMLAVLAEQRHDDKG 484

Query: 544 GNLPLWLSPIQAIVTTITSSA--VEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSI 600
            N P+ ++P Q  V      A  +E   ++   L +  L +  D R + +   K ++  +
Sbjct: 485 LNWPVAVAPYQVHVAVANKDAAAMEAGDKLVEELSAKGLEVLFDDRPKVSPGVKFKDAEL 544

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             +P + I G +   E  I +R  G  T + V   D +  + +
Sbjct: 545 LGMPFVAILG-RAFKEGKIELRIRGGETLE-VPAEDIVDKILE 585


>gi|254368866|ref|ZP_04984879.1| prolyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FSC022]
 gi|157121787|gb|EDO65957.1| prolyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FSC022]
          Length = 565

 Score =  133 bits (335), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 50/257 (19%), Positives = 93/257 (36%), Gaps = 27/257 (10%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            TQ  +       +E+    H+ + +   +  +A   SG+  W   G K+ Q + + +R 
Sbjct: 3   ATQTLIATTKELPKEAVLISHQYMLKAGLIKKLA---SGIYTWMPLGLKVLQKIQNIVRD 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P +L   L Q++  WD +   +  +       +  R F   P +    
Sbjct: 60  EMNKAGASELLLPSILPSELLQETHRWDKFGPELLKLHD-----RHNRDFCYGPTHEEPI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           V +    +KSY++LP+ L +  + +R+E      G+MR R F   DA+ F    Q     
Sbjct: 115 VDMARDTIKSYKQLPLNLYQIQTKFRDEIRPRF-GVMRAREFIMKDAYSFHENSQCLRNT 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++    +I    G     VK  T       S         ++    + I        
Sbjct: 174 YNTMYATYCNILDKIGLAYRPVKADTGAIGGDNSHEF-----QVLANAGEDI-------- 220

Query: 464 NTGVLLGEGAFYGPKFE 480
              +    G+ Y    E
Sbjct: 221 ---ICYSNGSDYAANIE 234



 Score = 82.9 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 23/152 (15%), Positives = 54/152 (35%), Gaps = 8/152 (5%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL---SPIQ 554
           ++       NA  +     K  P+++    FG        + ++   N  +W    +P Q
Sbjct: 415 LEDVYSKPMNANIIGQDG-KSKPMLMGCYGFGVSRVMAAAIEQSHDENGIIWPESIAPYQ 473

Query: 555 AIVTTITSSAVEYAQEIANLLKSH----HLSIETDFRNETINYKIREHSIKKIPIIIICG 610
             +  I  +     +E+A+ L        + +  D R         +  +      ++ G
Sbjct: 474 VAILPINYNKSAKVKEVADKLCQDLLGDGIDVLLDDRGARPGVMFADADLIGYSHHVVIG 533

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           D+   +  I  +   +   Q++++ + I IL 
Sbjct: 534 DRLLEQGLIEYKNRKTQEKQEITIAELIKILK 565


>gi|115470733|ref|NP_001058965.1| Os07g0165000 [Oryza sativa Japonica Group]
 gi|113610501|dbj|BAF20879.1| Os07g0165000 [Oryza sativa Japonica Group]
          Length = 377

 Score =  133 bits (335), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 54/303 (17%), Positives = 113/303 (37%), Gaps = 56/303 (18%)

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-F 394
           ++P +      +F   ++SYR+LP+ + ++ +V R E        +R   F   + H   
Sbjct: 1   VRPTSETIVNHMFTKWIQSYRDLPLMINQWANVTRWEMR--TKPFIRTLEFLWQEGHTAH 58

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDT 454
            T E+   E +++ ++      +     ++    +R E   G                  
Sbjct: 59  ATLEEAEKEAMQMIDVYTKFAYEQAAIPVIPGRKSRVETFAG------------------ 100

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNS 513
                             A      E ++ D   +  Q GT   +  N    F   +++ 
Sbjct: 101 ------------------ANRTYTIEAMMGDR--KALQAGTSHNLGQNFSRAFGTQFMDE 140

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTI------TSS 563
           +S+  H   + +  +    RF+G +I     +    LP  ++PIQ ++  I       S+
Sbjct: 141 NSQIEH---VWQTSWAISTRFVGGIIMTHGDDAGLMLPPNIAPIQVVIVPIWKKGDEKSA 197

Query: 564 AVEYAQEIANLLKSHHLSIETDFRN-ETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
            +E    + N LK   + ++ D     T  +K   + +K +PI +  G ++ + +S+ I 
Sbjct: 198 VMEAVSSVQNTLKEAGIRVKVDDSELRTPGWKFNFYEMKGVPIRLEIGPRDVTNKSVVIS 257

Query: 623 RFG 625
           R  
Sbjct: 258 RRD 260


>gi|89256041|ref|YP_513403.1| prolyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           LVS]
 gi|115314517|ref|YP_763240.1| prolyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           OSU18]
 gi|156502051|ref|YP_001428116.1| prolyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FTNF002-00]
 gi|167010208|ref|ZP_02275139.1| prolyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FSC200]
 gi|290953930|ref|ZP_06558551.1| prolyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           URFT1]
 gi|295312679|ref|ZP_06803424.1| prolyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           URFT1]
 gi|114152197|sp|Q2A4E9|SYP_FRATH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|122325457|sp|Q0BMT1|SYP_FRATO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|166980124|sp|A7NB07|SYP_FRATF RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|89143872|emb|CAJ79090.1| Prolyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           LVS]
 gi|115129416|gb|ABI82603.1| proline--tRNA ligase [Francisella tularensis subsp. holarctica
           OSU18]
 gi|156252654|gb|ABU61160.1| prolyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FTNF002-00]
          Length = 565

 Score =  133 bits (335), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 50/257 (19%), Positives = 93/257 (36%), Gaps = 27/257 (10%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            TQ  +       +E+    H+ + +   +  +A   SG+  W   G K+ Q + + +R 
Sbjct: 3   ATQTLIATTKELPKEAVLISHQYMLKAGLIKKLA---SGIYTWMPLGLKVLQKIQNIVRD 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P +L   L Q++  WD +   +  +       +  R F   P +    
Sbjct: 60  EMNKAGASELLLPSILPSELLQETHRWDKFGPELLKLHD-----RHNRDFCYGPTHEEPI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           V +    +KSY++LP+ L +  + +R+E      G+MR R F   DA+ F    Q     
Sbjct: 115 VDMARDTIKSYKQLPLNLYQIQTKFRDEIRPRF-GVMRAREFIMKDAYSFHENSQCLRNT 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++    +I    G     VK  T       S         ++    + I        
Sbjct: 174 YNTMYATYCNILDKIGLAYRPVKADTGAIGGDNSHEF-----QVLANAGEDI-------- 220

Query: 464 NTGVLLGEGAFYGPKFE 480
              +    G+ Y    E
Sbjct: 221 ---ICYSNGSDYAANIE 234



 Score = 84.4 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 22/152 (14%), Positives = 55/152 (36%), Gaps = 8/152 (5%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL---SPIQ 554
           ++       NA  +     K  P+++    FG        + ++   N  +W    +P Q
Sbjct: 415 LEDVYSKPMNANIIGQDG-KSKPMLMGCYGFGVSRVMAAAIEQSHDENGIIWPESIAPYQ 473

Query: 555 AIVTTITSSAVEYAQEIANLLKSH----HLSIETDFRNETINYKIREHSIKKIPIIIICG 610
             +  I  +  +  +E+A+ L        + +  D R         +  +      ++ G
Sbjct: 474 VAILPINYNKSDKVKEVADKLCQDLLGDGIDVLLDDRGARPGVMFADADLIGYSHHVVIG 533

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           D+   +  I  +   +   Q++++ + I +L 
Sbjct: 534 DRLLEQGLIEYKNRKTQEKQEITIAELIKLLK 565


>gi|46190981|ref|ZP_00120791.2| COG0442: Prolyl-tRNA synthetase [Bifidobacterium longum DJO10A]
 gi|317482435|ref|ZP_07941452.1| prolyl-tRNA synthetase [Bifidobacterium sp. 12_1_47BFAA]
 gi|316916095|gb|EFV37500.1| prolyl-tRNA synthetase [Bifidobacterium sp. 12_1_47BFAA]
          Length = 594

 Score =  133 bits (335), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 38/186 (20%), Positives = 77/186 (41%), Gaps = 8/186 (4%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
           +I +   G+  W   G ++   + + +R +I     +E++ P +L +  ++ +  W+ Y 
Sbjct: 26  YIRKAAPGIWTWLPLGLRVLNKIEAIIREEINGIGAQEVHFPALLPREPYEATHRWEEYG 85

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            N+F +K      +    + L P +      +      SY++LPV L +  + YR+E   
Sbjct: 86  DNIFRLKD-----RHEADYLLAPTHEEMFTLLVKDMYSSYKDLPVTLYQIQTKYRDEFRP 140

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNE-CLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              GL+R R F   DA+ F   E+   +           I++    + + V   + P   
Sbjct: 141 R-AGLIRGREFVMKDAYSFTIDEEGMRKAYYDERGAYERIFQRLDLKYVPVFAMSGPMGG 199

Query: 435 VGSDAL 440
             S+  
Sbjct: 200 SASEEF 205



 Score = 74.4 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 22/150 (14%), Positives = 57/150 (38%), Gaps = 12/150 (8%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN- 545
           R  + G + Q+        +   ++ + +    V +    +G  + R +  + E      
Sbjct: 428 RGVEIGQVFQLGLKYSKALDLKVLDQNGKA---VPVWMGCYGIGVSRVLACIAETHHDEA 484

Query: 546 ---LPLWLSPIQAIVTTITSSAVEY--AQEIANLLKSHHLSIETDFRNE-TINYKIREHS 599
               P  ++P    V      AV +  A+++   L++  L +  D R + +   K ++  
Sbjct: 485 GLAWPSVIAPAAVHVVATGKDAVAFEGAEKLVAELEAKGLEVIYDDRKKVSPGVKFKDAE 544

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           +  +P++ + G    ++ +I +R       
Sbjct: 545 LIGVPLVAVVGRDYVNDGTIELRDRNGENK 574


>gi|270284377|ref|ZP_05966008.2| proline--tRNA ligase [Bifidobacterium gallicum DSM 20093]
 gi|270276752|gb|EFA22606.1| proline--tRNA ligase [Bifidobacterium gallicum DSM 20093]
          Length = 602

 Score =  133 bits (335), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 40/196 (20%), Positives = 79/196 (40%), Gaps = 11/196 (5%)

Query: 247 RKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLW 305
           + L R   L    +   G+  W   G  +   + + +R ++     +E++ P +L +  +
Sbjct: 28  KLLQRAGYLR---KAAPGIWTWLPLGLSVLNKIEAIIREEMNGIGAQEVHFPALLPRAPY 84

Query: 306 QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEF 365
           + +  W+ Y  N+F +K      +    + L P +      +      SY++LPV L + 
Sbjct: 85  EATHRWEEYGENLFRLKD-----RHEADYLLAPTHEEMFTLLVKDMYSSYKDLPVTLYQI 139

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFEKIM 424
            + YR+E      GL+R R F   DA+ F   E+    C  +       I++    + + 
Sbjct: 140 QTKYRDEFRPR-AGLIRGREFIMKDAYSFTLDEEGMKRCYMEERAAYERIFQRLDLQYVP 198

Query: 425 VKLSTRPEKRVGSDAL 440
           V   + P     S+  
Sbjct: 199 VFAMSGPMGGSASEEF 214



 Score = 85.2 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 64/164 (39%), Gaps = 12/164 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN- 545
           R  + G + Q+            +N + +    V +    +G  + R +  + E+     
Sbjct: 437 RGVEIGQVFQLGLKYSEALGLNVLNQNGKS---VPVWMGCYGIGVSRVLACIAESHHDER 493

Query: 546 ---LPLWLSPIQAIVTTIT--SSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHS 599
               P  ++P Q  V       +A E A+++   L++  + +  D R + +   K ++  
Sbjct: 494 GLAWPANIAPAQVHVVATGKDEAAFEAAEKLVAELEARGVEVIFDDRKKVSPGVKFKDAE 553

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  +P+I + G    ++ +I +R    +  Q V    A  ++  
Sbjct: 554 LIGVPLIAVAGRDTVNDGTIEVRLRDGSDKQAVPAETAAQVIAD 597


>gi|226227159|ref|YP_002761265.1| prolyl-tRNA synthetase [Gemmatimonas aurantiaca T-27]
 gi|226090350|dbj|BAH38795.1| prolyl-tRNA synthetase [Gemmatimonas aurantiaca T-27]
          Length = 489

 Score =  133 bits (335), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 58/419 (13%), Positives = 139/419 (33%), Gaps = 66/419 (15%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
             ++    + +L    +L   +     ++     G+ I++ +   +    K   +     
Sbjct: 10  RADNFSDWYNELVLRSELADYSPVRGCMVI-RPWGYGIWERMQRALDDMFKATGHVNAYF 68

Query: 297 PQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P  + +    +++ H + +      V        + R   ++P +     ++F   ++SY
Sbjct: 69  PLFIPESFLSKEAEHVEGFAPECAVVTMGGGKQLEER-LVVRPTSETIIYSMFAKWVQSY 127

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISI 414
           R+LP+   ++ +V R E        +R   F   + H    T ++   E  ++  +  + 
Sbjct: 128 RDLPLLYNQWANVVRWEMR--TRLFLRTMEFLWQEGHTAHATHDEAEEETRRMLGVYRTF 185

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            +++    ++    T  EK  G                                    A 
Sbjct: 186 MEEYMAMPVITGQKTDAEKFAG------------------------------------AL 209

Query: 475 YGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
                E +++D   +  Q GT   +  N    F+  + N   ++ H        +G   R
Sbjct: 210 RTYCTEAMMQD--NKALQAGTSHNLGQNFAKAFDLTFQNEAGQQDHA---WNTSWGVSTR 264

Query: 534 FIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSH----------- 578
            IG ++    ++    LP  L+P Q ++  I  +  E A  I    +             
Sbjct: 265 MIGGLVMTHSDDAGLRLPPRLAPTQMVIVPIWKTDEERAATIEAAKRIAEDLGSFKRPDH 324

Query: 579 -HLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
             + +  D R       K     ++ +P+ +  G ++ +  S  + R  +   + ++  
Sbjct: 325 ERIRVHVDERVGIKPGAKYYHWELRGVPLRMEIGPRDLASSSGMLVRRDTREKRSIAFD 383


>gi|289662612|ref|ZP_06484193.1| prolyl-tRNA synthetase [Xanthomonas campestris pv. vasculorum
           NCPPB702]
 gi|289668443|ref|ZP_06489518.1| prolyl-tRNA synthetase [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 564

 Score =  133 bits (335), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 44/220 (20%), Positives = 84/220 (38%), Gaps = 11/220 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  L        ++E   HR + R   +  +A   SG+  W   G ++ + + + +R +
Sbjct: 4   SQFHLHTTKETPADAELVSHRLMLRAGMIRKLA---SGLYTWSPLGLRVLRKVEAIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P +  + LW  +G W+ +   +  +K   +     + F   P       
Sbjct: 61  MNRAGAVEVLFPTIQPRELWDATGRWEKFGGQLLKIKDRKE-----QEFCYSPTAEEAAA 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNEC 404
                 + SY++LP+   +  + +R+E      G+MR R F   DA+ F  T E M  E 
Sbjct: 116 EFARQEINSYKQLPLNFYQIQTKFRDEIRPRF-GVMRAREFLMKDAYSFHLTDEDMAREY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
             +      I+   G +   V+  +       S      A
Sbjct: 175 DNMRAAYTRIFTRLGLDFRAVQADSGAIGGDASQEFHVIA 214



 Score = 75.2 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 54/163 (33%), Gaps = 13/163 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGN 545
           R  + G + Q+         A  ++   E     ++    +G  I R +   IE N    
Sbjct: 403 RGIEVGHVFQLGSQYAQALQATVID---EGGKAAVMKMGCYGIGISRIVAAAIEQNHDEA 459

Query: 546 LPLW---LSPIQAIVTTITSSA----VEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
             +W   ++P Q +V  I        V  AQ + + L +  L    D R         + 
Sbjct: 460 GIIWPAPMAPWQVVVCVINPKQDANVVAAAQALLDELIAAGLDAALDDRGLRPGAMFADM 519

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            +  IP  ++  ++  +  +   R   +   + +        L
Sbjct: 520 ELLGIPHRVVVSERGLAAGTFEYRARTADAAENLDRAGLFSRL 562


>gi|239621659|ref|ZP_04664690.1| prolyl-tRNA synthetase [Bifidobacterium longum subsp. infantis CCUG
           52486]
 gi|239515534|gb|EEQ55401.1| prolyl-tRNA synthetase [Bifidobacterium longum subsp. infantis CCUG
           52486]
          Length = 607

 Score =  133 bits (335), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 38/186 (20%), Positives = 77/186 (41%), Gaps = 8/186 (4%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
           +I +   G+  W   G ++   + + +R +I     +E++ P +L +  ++ +  W+ Y 
Sbjct: 39  YIRKAAPGIWTWLPLGLRVLNKIEAIIREEINGIGAQEVHFPALLPREPYEATHRWEEYG 98

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            N+F +K      +    + L P +      +      SY++LPV L +  + YR+E   
Sbjct: 99  DNIFRLKD-----RHEADYLLAPTHEEMFTLLVKDMYSSYKDLPVTLYQIQTKYRDEFRP 153

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNE-CLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              GL+R R F   DA+ F   E+   +           I++    + + V   + P   
Sbjct: 154 R-AGLIRGREFVMKDAYSFTIDEEGMRKAYYDERGAYERIFQRLDLKYVPVFAMSGPMGG 212

Query: 435 VGSDAL 440
             S+  
Sbjct: 213 SASEEF 218



 Score = 74.4 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 22/150 (14%), Positives = 57/150 (38%), Gaps = 12/150 (8%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN- 545
           R  + G + Q+        +   ++ + +    V +    +G  + R +  + E      
Sbjct: 441 RGVEIGQVFQLGLKYSKALDLKVLDQNGKA---VPVWMGCYGIGVSRVLACIAETHHDEA 497

Query: 546 ---LPLWLSPIQAIVTTITSSAVEY--AQEIANLLKSHHLSIETDFRNE-TINYKIREHS 599
               P  ++P    V      AV +  A+++   L++  L +  D R + +   K ++  
Sbjct: 498 GLAWPSVIAPAAVHVVATGKDAVAFEGAEKLVAELEAKGLEVIYDDRKKVSPGVKFKDAE 557

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           +  +P++ + G    ++ +I +R       
Sbjct: 558 LIGVPLVAVVGRDYVNDGTIELRDRNGENK 587


>gi|77748729|ref|NP_643874.2| prolyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str. 306]
 gi|114152277|sp|Q8PGP9|SYP_XANAC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
          Length = 564

 Score =  133 bits (335), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 44/220 (20%), Positives = 84/220 (38%), Gaps = 11/220 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  L        ++E   HR + R   +  +A   SG+  W   G ++ + + + +R +
Sbjct: 4   SQFHLHTTKETPADAELVSHRLMLRAGMIRKLA---SGLYTWSPLGLRVLRKVEAIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P +  + LW  +G W+ +   +  +K   +     + F   P       
Sbjct: 61  MNRAGAVEVLFPTIQPRELWDATGRWEKFGGQLLKIKDRKE-----QEFCYSPTAEEAAA 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNEC 404
                 + SY++LP+   +  + +R+E      G+MR R F   DA+ F  T E M  E 
Sbjct: 116 EFARQEINSYKQLPLNFYQIQTKFRDEIRPRF-GVMRAREFLMKDAYSFHLTDEDMAREY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
             +      I+   G +   V+  +       S      A
Sbjct: 175 DNMRAAYTRIFTRLGLDFRAVQADSGAIGGDASQEFHVIA 214



 Score = 59.8 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 50/163 (30%), Gaps = 13/163 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGN 545
           R  + G + Q+         A  ++   E     ++    +G  I R +   IE N    
Sbjct: 403 RGIEVGHVFQLGSQYAQALQATVID---EGGKAAVMKMGCYGIGISRIVAAAIEQNHDDA 459

Query: 546 LPLW---LSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF----RNETINYKIREH 598
             +W   ++P Q +V  I           A  L    L+   D     R         + 
Sbjct: 460 GIIWPAPMAPWQVVVCVINPKQDPQVLAAAQALLDQLLAAGLDAALDDRGLRPGAMFADM 519

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            +  IP  ++  ++  +  +   R   +   + +        L
Sbjct: 520 ELLGIPHRVVVSERGLAAGTFEYRARTADAAESLDKAGLFSRL 562


>gi|254432589|ref|ZP_05046292.1| prolyl-tRNA synthetase [Cyanobium sp. PCC 7001]
 gi|197627042|gb|EDY39601.1| prolyl-tRNA synthetase [Cyanobium sp. PCC 7001]
          Length = 615

 Score =  133 bits (335), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 53/215 (24%), Positives = 86/215 (40%), Gaps = 8/215 (3%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E   H+ L R   +  I   GSG+  +    W++ + + + +R ++      E   PQ
Sbjct: 17  EAEIPSHKLLLRAGYMRRI---GSGIYAYLPLLWRVLRKVSAIVREELDAIGALETLLPQ 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W  Y      +   +D  +  R   L P +     A+    L+SYR+L
Sbjct: 74  MQPAELWQRSGRWSGYTDGEGIMFHLED--RQGRAMGLGPTHEEVVTALAADLLRSYRQL 131

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH-NLIISIYKD 417
           PV L +  + +R+E      GLMR R F   DA+ F   E                I++ 
Sbjct: 132 PVTLYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSFHADEASLRRTYAAMDRAYARIFRR 190

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
            G   + V+  +       S      A+     VL
Sbjct: 191 CGLRALAVEADSGAIGGSASQEFMVTADAGEDLVL 225



 Score = 76.7 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 58/160 (36%), Gaps = 9/160 (5%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I Q+     S   A + N   E+  P+ +     G        + ++      
Sbjct: 438 RGIEVGHIFQLGRKYSSAMEASFTNEAGEEE-PLWMGCYGIGVSRLAQAAVEQHHDDQGI 496

Query: 548 LWLSPIQA----IVTTITSSAVEYA--QEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            W +PI      +V    + A + A  ++I   L+   +    D R+E    K ++  + 
Sbjct: 497 RWPTPIAPFEVIVVVANGADATQAALGEQIYATLQQAGVDTLLDDRSERAGVKFKDADLI 556

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            IP  ++ G + A +  + + R        ++    +  L
Sbjct: 557 GIPWRVVVG-RGAPDGQVELVRRADGVRVDLAAEALLERL 595


>gi|304384864|ref|ZP_07367210.1| proline--tRNA ligase [Pediococcus acidilactici DSM 20284]
 gi|304329058|gb|EFL96278.1| proline--tRNA ligase [Pediococcus acidilactici DSM 20284]
          Length = 571

 Score =  133 bits (335), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 51/248 (20%), Positives = 97/248 (39%), Gaps = 22/248 (8%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++E   H+ + R   +  I+    G+  +    +K+ + +   +R +
Sbjct: 4   SKILIPTVKEVPNDAEVLSHKMMLRAGYIRQISA---GMYAYLPMAYKVMEKIKRIIREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +   D  E+ TP VL   LW++SG +++Y   ++  K   D     R F L P +     
Sbjct: 61  MTAIDAVEMLTPAVLPAELWKKSGRYETYGQELYKFKNRHD-----RDFILGPTHEETMT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    +KSY++LP+ L +    YR+E     +GL+R R F   DA+ F   E+  +E  
Sbjct: 116 TLIRDEVKSYKKLPLTLYQIQMKYRDEDRPR-YGLLRGREFLMSDAYSFHADEETLDESF 174

Query: 406 KIHN------------LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
           +                   I  D G               +G D +    E+     L+
Sbjct: 175 RAFEKAYQNIFDRCGLKYREIVGDAGAMGGHDSKEFSAIASIGEDTIAYSEESDYAANLE 234

Query: 454 TIKNSSQD 461
              +  +D
Sbjct: 235 MASSVYED 242



 Score = 77.5 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 36/190 (18%), Positives = 71/190 (37%), Gaps = 17/190 (8%)

Query: 466 GVLLGEGAFYGP-KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIH 524
            V  GE A  G  K ++     IG  ++ GT           +A  ++ +  +  PV++ 
Sbjct: 388 TVKEGELAPDGKGKLKFTKGIEIGHIFKIGT-----KYSKALDATVLDQNG-RAIPVIMG 441

Query: 525 RAVFGSIERFIGI---MIENFKGNLPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSH 578
               G       +   + +      P  ++P    V  +       ++ A +I   L + 
Sbjct: 442 CYGIGVSRLLSAVSEQLADENGLVWPKNIAPFDVHVIPVNAKNDEQMQVADQINTELVAA 501

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA- 637
              +  D R E    K  +  +  IP+ +  G K ASE  + ++   +  T +V L +  
Sbjct: 502 GYDVLIDDRKERAGVKFADSDLIGIPLRVTVGKK-ASEGIVEVKLRQTGETVEVKLAELK 560

Query: 638 --IPILTKES 645
             + IL  ++
Sbjct: 561 NTVEILLNQA 570


>gi|300858703|ref|YP_003783686.1| prolyl-tRNA synthetase [Corynebacterium pseudotuberculosis FRC41]
 gi|300686157|gb|ADK29079.1| Prolyl-tRNA synthetase [Corynebacterium pseudotuberculosis FRC41]
          Length = 585

 Score =  133 bits (335), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 42/230 (18%), Positives = 85/230 (36%), Gaps = 11/230 (4%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R     +I     GV  W   G +  + + + +R ++     +E+  P 
Sbjct: 19  DAEVPSHKLLVRA---RYIRRAAPGVYTWLPLGLRTLKKIENIVREEMDGIGAQELLFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  +Q +  W  Y  ++F +K      +    + L P +             SY++ 
Sbjct: 76  LLPREPYQATNRWTEYGDSLFRLKD-----RKGADYLLGPTHEEMFAGAVKDMYSSYKDF 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKD 417
           PV L +  + YR+E      G++R R F   D++ F   +       + H      I   
Sbjct: 131 PVTLYQIQTKYRDEERPR-AGILRGREFVMKDSYSFDMTDDGLESSYQRHRGAYQRILDR 189

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGV 467
            G E  +   ++       S+     +EN     +   + +    +   V
Sbjct: 190 LGVEYAICSATSGAMGGSASEEFLAISENGEDTFVRATQGNYAANVEAVV 239



 Score = 82.1 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 29/211 (13%), Positives = 79/211 (37%), Gaps = 12/211 (5%)

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI-QVD 499
           W    +  +  +  +       + + +   E     P  E      + R  + G I Q+ 
Sbjct: 375 WITGADADQRHVINLTVGRDFEVESYIEAAEVREGDPAPEGQGTLTLARGIEVGHIFQLG 434

Query: 500 FNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG----NLPLWLSP--I 553
                 F+   ++ + ++  P M    +   + R + ++ E        N P+ ++P  +
Sbjct: 435 RKYTEAFDVQILDENGKRAIPTMGSYGI--GVSRLMAVLAEQRHDEKGLNWPIEVAPFAV 492

Query: 554 QAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDK 612
             +V    ++A+E    + + L +  + +  D R + +   K ++  +  +P +++ G +
Sbjct: 493 HVVVANKDTAAIEAGDALVSELDAAGVEVLFDDRPKVSPGVKFKDAELLGMPYVVVLG-R 551

Query: 613 EASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              E  + +R  G    + +   +A   +  
Sbjct: 552 SFKEGKVELRVRGEEAVE-IPAAEAAARIID 581


>gi|21109942|gb|AAM38410.1| prolyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str. 306]
          Length = 583

 Score =  133 bits (334), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 44/220 (20%), Positives = 84/220 (38%), Gaps = 11/220 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  L        ++E   HR + R   +  +A   SG+  W   G ++ + + + +R +
Sbjct: 23  SQFHLHTTKETPADAELVSHRLMLRAGMIRKLA---SGLYTWSPLGLRVLRKVEAIVREE 79

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P +  + LW  +G W+ +   +  +K   +     + F   P       
Sbjct: 80  MNRAGAVEVLFPTIQPRELWDATGRWEKFGGQLLKIKDRKE-----QEFCYSPTAEEAAA 134

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNEC 404
                 + SY++LP+   +  + +R+E      G+MR R F   DA+ F  T E M  E 
Sbjct: 135 EFARQEINSYKQLPLNFYQIQTKFRDEIRPRF-GVMRAREFLMKDAYSFHLTDEDMAREY 193

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
             +      I+   G +   V+  +       S      A
Sbjct: 194 DNMRAAYTRIFTRLGLDFRAVQADSGAIGGDASQEFHVIA 233



 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 50/163 (30%), Gaps = 13/163 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGN 545
           R  + G + Q+         A  ++   E     ++    +G  I R +   IE N    
Sbjct: 422 RGIEVGHVFQLGSQYAQALQATVID---EGGKAAVMKMGCYGIGISRIVAAAIEQNHDDA 478

Query: 546 LPLW---LSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF----RNETINYKIREH 598
             +W   ++P Q +V  I           A  L    L+   D     R         + 
Sbjct: 479 GIIWPAPMAPWQVVVCVINPKQDPQVLAAAQALLDQLLAAGLDAALDDRGLRPGAMFADM 538

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            +  IP  ++  ++  +  +   R   +   + +        L
Sbjct: 539 ELLGIPHRVVVSERGLAAGTFEYRARTADAAESLDKAGLFSRL 581


>gi|294664482|ref|ZP_06729831.1| prolyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|292605740|gb|EFF49042.1| prolyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
          Length = 621

 Score =  133 bits (334), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 44/220 (20%), Positives = 84/220 (38%), Gaps = 11/220 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  L        ++E   HR + R   +  +A   SG+  W   G ++ + + + +R +
Sbjct: 61  SQFHLHTTKETPADAELVSHRLMLRAGMIRKLA---SGLYTWSPLGLRVLRKVEAIVREE 117

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P +  + LW  +G W+ +   +  +K   +     + F   P       
Sbjct: 118 MNRAGAVEVLFPTIQPRELWDATGRWEKFGGQLLKIKDRKE-----QEFCYSPTAEEAAA 172

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNEC 404
                 + SY++LP+   +  + +R+E      G+MR R F   DA+ F  T E M  E 
Sbjct: 173 EFARQEINSYKQLPLNFYQIQTKFRDEIRPRF-GVMRAREFLMKDAYSFHLTDEDMAREY 231

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
             +      I+   G +   V+  +       S      A
Sbjct: 232 DNMRAAYTRIFTRLGLDFRAVQADSGAIGGDASQEFHVIA 271



 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 50/163 (30%), Gaps = 13/163 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGN 545
           R  + G + Q+         A  ++   E     ++    +G  I R +   IE N    
Sbjct: 460 RGIEVGHVFQLGSQYAQALQATVID---EGGKAAVMKMGCYGIGISRIVAAAIEQNHDDA 516

Query: 546 LPLW---LSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF----RNETINYKIREH 598
             +W   ++P Q +V  I           A  L    L+   D     R         + 
Sbjct: 517 GIIWPAPMAPWQVVVCVINPKQDPQVLAAAQALLDQLLAAGLDAALDDRGLRPGAMFADM 576

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            +  IP  ++  ++  +  +   R   +   + +        L
Sbjct: 577 ELLGIPHRVVVSERGLAAGTFEYRARTADAAESLDKAGLFSRL 619


>gi|294625222|ref|ZP_06703863.1| prolyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292600496|gb|EFF44592.1| prolyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
          Length = 621

 Score =  133 bits (334), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 44/220 (20%), Positives = 84/220 (38%), Gaps = 11/220 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  L        ++E   HR + R   +  +A   SG+  W   G ++ + + + +R +
Sbjct: 61  SQFHLHTTKETPADAELVSHRLMLRAGMIRKLA---SGLYTWSPLGLRVLRKVEAIVREE 117

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P +  + LW  +G W+ +   +  +K   +     + F   P       
Sbjct: 118 MNRAGAVEVLFPTIQPRELWDATGRWEKFGGQLLKIKDRKE-----QEFCYSPTAEEAAA 172

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNEC 404
                 + SY++LP+   +  + +R+E      G+MR R F   DA+ F  T E M  E 
Sbjct: 173 EFARQEINSYKQLPLNFYQIQTKFRDEIRPRF-GVMRAREFLMKDAYSFHLTDEDMAREY 231

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
             +      I+   G +   V+  +       S      A
Sbjct: 232 DNMRAAYTRIFTRLGLDFRAVQADSGAIGGDASQEFHVIA 271



 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 50/163 (30%), Gaps = 13/163 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGN 545
           R  + G + Q+         A  ++   E     ++    +G  I R +   IE N    
Sbjct: 460 RGIEVGHVFQLGSQYAQALQATVID---EGGKAAVMKMGCYGIGISRIVAAAIEQNHDDA 516

Query: 546 LPLW---LSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF----RNETINYKIREH 598
             +W   ++P Q +V  I           A  L    L+   D     R         + 
Sbjct: 517 GIIWPAPMAPWQVVVCVINPKQDPQVLAAAQALLDQLLAAGLDAALDDRGLRPGAMFADM 576

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            +  IP  ++  ++  +  +   R   +   + +        L
Sbjct: 577 ELLGIPHRVVVSERGLAAGTFEYRARTADAAESLDKAGLFSRL 619


>gi|270290317|ref|ZP_06196542.1| prolyl-tRNA synthetase [Pediococcus acidilactici 7_4]
 gi|270281098|gb|EFA26931.1| prolyl-tRNA synthetase [Pediococcus acidilactici 7_4]
          Length = 571

 Score =  133 bits (334), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 51/248 (20%), Positives = 97/248 (39%), Gaps = 22/248 (8%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++E   H+ + R   +  I+    G+  +    +K+ + +   +R +
Sbjct: 4   SKILIPTVKEVPNDAEVLSHKMMLRAGYIRQISA---GMYAYLPMAYKVMEKIKRIIREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +   D  E+ TP VL   LW++SG +++Y   ++  K   D     R F L P +     
Sbjct: 61  MTAIDAVEMLTPAVLPAELWKKSGRYETYGQELYKFKNRHD-----RDFILGPTHEETMT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    +KSY++LP+ L +    YR+E     +GL+R R F   DA+ F   E+  +E  
Sbjct: 116 TLIRDEVKSYKKLPLTLYQIQMKYRDEDRPR-YGLLRGREFLMSDAYSFHADEETLDESF 174

Query: 406 KIHN------------LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
           +                   I  D G               +G D +    E+     L+
Sbjct: 175 RAFEKAYQNIFDRCGLKYREIVGDAGAMGGHDSKEFSAIASIGEDTIAYSEESDYAANLE 234

Query: 454 TIKNSSQD 461
              +  +D
Sbjct: 235 MASSVYED 242



 Score = 77.5 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 36/190 (18%), Positives = 71/190 (37%), Gaps = 17/190 (8%)

Query: 466 GVLLGEGAFYGP-KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIH 524
            V  GE A  G  K ++     IG  ++ GT           +A  ++ +  +  PV++ 
Sbjct: 388 TVKEGELAPDGKGKLKFTKGIEIGHIFKIGT-----KYSKALDATVLDQNG-RAIPVIMG 441

Query: 525 RAVFGSIERFIGI---MIENFKGNLPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSH 578
               G       +   + +      P  ++P    V  +       ++ A +I   L + 
Sbjct: 442 CYGIGVSRLLSAVSEQLADENGLVWPKNIAPFDVHVIPVNAKNDEQMQVADQINTELVAA 501

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA- 637
              +  D R E    K  +  +  IP+ +  G K ASE  + ++   +  T +V L +  
Sbjct: 502 GYDVLIDDRKERAGVKFADSDLIGIPLRVTVGKK-ASEGIVEVKLRQTGETVEVKLAELK 560

Query: 638 --IPILTKES 645
             + IL  ++
Sbjct: 561 NTVEILLNQA 570


>gi|264676905|ref|YP_003276811.1| prolyl-tRNA synthetase [Comamonas testosteroni CNB-2]
 gi|262207417|gb|ACY31515.1| prolyl-tRNA synthetase [Comamonas testosteroni CNB-2]
          Length = 580

 Score =  133 bits (334), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 40/217 (18%), Positives = 86/217 (39%), Gaps = 11/217 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       ++E   H+ + R   +  +   G+G+  +   G ++ + + + +R 
Sbjct: 3   ASQFLISTLKEAPADAEVVSHKLMMRAGMIKKL---GAGIYNYMPMGLRVIRKVEAIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E   P V    LWQ++G ++     +  ++      +  R F ++P +    
Sbjct: 60  EMNRAGAIETTMPVVQPAELWQETGRFEKMGPELLRIQD-----RHGRDFVIQPTSEEVV 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
             +     KSY++LP  L +  + +R+E      GLMR R F   DA+ F    +     
Sbjct: 115 TDIARQEFKSYKQLPKNLYQIQTKFRDERRPRF-GLMRGREFIMKDAYSFDKDRDAAQIS 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
              +      I+  FG +   V+  +       S+  
Sbjct: 174 YQTMREAYKRIFDRFGLQYRAVRADSGAIGGDLSEEF 210



 Score = 80.6 bits (197), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 23/164 (14%), Positives = 57/164 (34%), Gaps = 7/164 (4%)

Query: 486 AIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           AI R  + G +       S+         + K     +     G        + +N    
Sbjct: 412 AIERGIEIGHVFYLGTKYSKAMEATFLGDNGKPQHFEMGCYGIGVTRLPAAAVEQNHDER 471

Query: 546 LPLWL---SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
             +W    +P   ++  I    + +    A+++   L +  + +  D R+E     + + 
Sbjct: 472 GMIWPDAIAPFTVVICPIGMGRSEAVKTEAEKLYGELLALGVDVILDDRDERPGAMLADW 531

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +  +P  ++ GD+   E  +  ++   T   K++  + +  L 
Sbjct: 532 ELIGVPHRVVLGDRGLKEGVVEYQQRRDTEATKLATNEVLAHLK 575


>gi|74152256|dbj|BAE32409.1| unnamed protein product [Mus musculus]
          Length = 511

 Score =  133 bits (334), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 63/386 (16%), Positives = 125/386 (32%), Gaps = 49/386 (12%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I     G         +  + L+  + ++++    ++IN P +    LW+ +  WD    
Sbjct: 116 ILPASPGCYHLMPYTVRAVEKLVRVIDQEMQAIGGQKINMPSLSPAELWRATSRWDLMGR 175

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPSG 375
            +  ++      +  + + L P +     A+     K SY++LP+ L +    +R+EP  
Sbjct: 176 ELLRLRD-----RHGKEYCLGPTHEEAVTALVASQKKLSYKQLPLLLYQVTRKFRDEPRP 230

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKDFGFEKIMVKLSTRPEKR 434
              GL+R R F   D + F +  +   E   +       ++   G   +  +        
Sbjct: 231 RF-GLLRGREFYMKDMYTFDSSSEAAQETYGLVCDAYCRLFDRLGLRWMKARADVGSIGG 289

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY------ILKDAIG 488
             S                   +  +DR+    ++     +    E       I  D  G
Sbjct: 290 TMSHEF------------QLPVDIGEDRL----VVCPSCHFSANTEILDLSQKICPDCQG 333

Query: 489 RDWQCGTIQVDFNLP---SRFNAFYVNSHSEKCHPVMIHRAVFG-SIERFIGIMIENFKG 544
              +   I+V           + F     +     ++     +G  + R +   IE    
Sbjct: 334 PLTETKGIEVGHTFYLGTKYSSIFNALFTNAHGESLLAEMGCYGLGVTRILAAAIEVLST 393

Query: 545 ----NLPLWLSPIQAIVTTITSSAVEYAQ-EIANLLKSH--------HLSIETDFRNE-T 590
                 P  L+P Q  V      + E A  EI   L              +  D R   T
Sbjct: 394 EDCIRWPRLLAPYQVCVIPPKKGSKETAATEIVEKLYDDVMEAVPQLRGEVLLDDRTHLT 453

Query: 591 INYKIREHSIKKIPIIIICGDKEASE 616
           I  ++++ +    P +II G +   +
Sbjct: 454 IGNRLKDANKLGYPFVIIAGKRALED 479


>gi|73919762|sp|Q8CFI5|SYPM_MOUSE RecName: Full=Probable prolyl-tRNA synthetase, mitochondrial;
           AltName: Full=Proline--tRNA ligase; Short=ProRS; Flags:
           Precursor
 gi|24416455|gb|AAH38817.1| Prolyl-tRNA synthetase (mitochondrial)(putative) [Mus musculus]
          Length = 475

 Score =  133 bits (334), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 63/386 (16%), Positives = 125/386 (32%), Gaps = 49/386 (12%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I     G         +  + L+  + ++++    ++IN P +    LW+ +  WD    
Sbjct: 80  ILPASPGCYHLMPYTVRAVEKLVRVIDQEMQAIGGQKINMPSLSPAELWRATSRWDLMGR 139

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPSG 375
            +  ++      +  + + L P +     A+     K SY++LP+ L +    +R+EP  
Sbjct: 140 ELLRLRD-----RHGKEYCLGPTHEEAVTALVASQKKLSYKQLPLLLYQVTRKFRDEPRP 194

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKDFGFEKIMVKLSTRPEKR 434
              GL+R R F   D + F +  +   E   +       ++   G   +  +        
Sbjct: 195 RF-GLLRGREFYMKDMYTFDSSSEAAQETYGLVCDAYCRLFDRLGLRWMKARADVGSIGG 253

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY------ILKDAIG 488
             S                   +  +DR+    ++     +    E       I  D  G
Sbjct: 254 TMSHEF------------QLPVDIGEDRL----VVCPSCHFSANTEILDLSQKICPDCQG 297

Query: 489 RDWQCGTIQVDFNLP---SRFNAFYVNSHSEKCHPVMIHRAVFG-SIERFIGIMIENFKG 544
              +   I+V           + F     +     ++     +G  + R +   IE    
Sbjct: 298 PLTETKGIEVGHTFYLGTKYSSIFNALFTNAHGESLLAEMGCYGLGVTRILAAAIEVLST 357

Query: 545 ----NLPLWLSPIQAIVTTITSSAVEYAQ-EIANLLKSH--------HLSIETDFRNE-T 590
                 P  L+P Q  V      + E A  EI   L              +  D R   T
Sbjct: 358 EDCIRWPRLLAPYQVCVIPPKKGSKETAATEIVEKLYDDVMEAVPQLRGEVLLDDRTHLT 417

Query: 591 INYKIREHSIKKIPIIIICGDKEASE 616
           I  ++++ +    P +II G +   +
Sbjct: 418 IGNRLKDANKLGYPFVIIAGKRALED 443


>gi|71898157|ref|ZP_00680343.1| Prolyl-tRNA synthetase, bacterial [Xylella fastidiosa Ann-1]
 gi|71732131|gb|EAO34187.1| Prolyl-tRNA synthetase, bacterial [Xylella fastidiosa Ann-1]
          Length = 564

 Score =  133 bits (334), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 42/220 (19%), Positives = 82/220 (37%), Gaps = 11/220 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  L        ++E   HR + R   +  +A   SG+  W   G ++ + + + +R +
Sbjct: 4   SEFHLHTTKEIPADAELVSHRLMLRAGMIRKLA---SGLYTWSPLGLRVLRKVEAIVRDE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P +  + LW++S  W+ + + +  +K           +   P       
Sbjct: 61  MNRAGAVEMLLPTIQPRELWEESERWEKFGSQLLKIKDRKQA-----EYCYSPTAEEAVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF-NEC 404
                 L SY++LPV   +  + +R+E      G+MR R F   DA+ F   +     E 
Sbjct: 116 DYVRQELTSYKQLPVNFYQIQTKFRDEIRPRF-GVMRAREFVMKDAYSFHLNDADLVREY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
             +      I+   G E   V+  +       S      A
Sbjct: 175 ENMRATYTRIFTRLGLEFRSVQADSGAIGGDASQEFHVIA 214



 Score = 61.3 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 60/186 (32%), Gaps = 19/186 (10%)

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
           V+ G+ A  G K        I R  + G + Q+         A  ++ + +    V +  
Sbjct: 387 VIEGDRAVDGGKI------CIARGIEVGHVFQLGRKYTEAMKATVLDEYGKA---VTMTM 437

Query: 526 AVFGS-IERFIGIMIENFKGNLPL-WLSPI---QAIVTTITSSAVEYAQEIANLLKSHHL 580
             +G  + R +   IE       + W +PI   Q  V  I           A LL +   
Sbjct: 438 GCYGIGVSRIVAAAIEQNHDVAGIIWPAPIAPWQVAVCVINPKKDPVITAAAELLLAELQ 497

Query: 581 SIETD----FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
           S + D     R         +  +  IP  I+  ++  +  +   R   +   + +    
Sbjct: 498 SADVDTVLDDRGLRPGVMFADMELIGIPHRIVVSERGLAAGTYEYRARRTAMVENLDKTT 557

Query: 637 AIPILT 642
            +  + 
Sbjct: 558 LLTRIK 563


>gi|255325212|ref|ZP_05366318.1| proline--tRNA ligase [Corynebacterium tuberculostearicum SK141]
 gi|255297777|gb|EET77088.1| proline--tRNA ligase [Corynebacterium tuberculostearicum SK141]
          Length = 589

 Score =  133 bits (334), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 42/235 (17%), Positives = 89/235 (37%), Gaps = 11/235 (4%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +  +A    GV  W   G +  + +   +R+++     +E+  P 
Sbjct: 19  DAEVPSHKLLVRAGYVRRVA---PGVYTWLPLGLRTLRKIEDVVRQEMDAIGGQEMLFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++++  W  Y  N+F +K   +         L P +     +       SY++ 
Sbjct: 76  LLPREPYEKTNRWVEYGDNLFRLKDRKNA-----DMLLGPTHEEMFASAVKDMYSSYKDF 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKD 417
           PV L +  + YR+E       L R R FT  D++ F   ++  +E    H     +I+  
Sbjct: 131 PVTLYQIQTKYRDEERPRAGVL-RGREFTMKDSYSFDMTDEGLDESYGRHRKAYQNIFNR 189

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
              +  + K ++       S+     +E      + + +      +   V     
Sbjct: 190 LEIDYAICKATSGAMGGSASEEFLAVSEVGEDTFVRSTEGDYAANVEAVVTPAPA 244



 Score = 83.7 bits (205), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 66/163 (40%), Gaps = 12/163 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE----NFK 543
           R  + G I Q+       F+   ++ + ++  P M    +   I R + ++ E    +  
Sbjct: 427 RGIELGHIFQLGRKYTEAFDVQILDENGKRAVPTMGSYGI--GITRMLAVLAEQRHDDKG 484

Query: 544 GNLPLWLSPIQAIVTTITSSA--VEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSI 600
            N P+ ++P Q  V      A  +E   ++   L +  L +  D R + +   K ++  +
Sbjct: 485 LNWPVAVAPYQVHVAVANKDAAAMEAGDKLVEELSAKGLEVLFDDRPKVSPGVKFKDAEL 544

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             +P + I G +   E  I +R  G  T + V   D +  + +
Sbjct: 545 LGMPFVAILG-RAFKEGKIELRIRGGETLE-VPAEDIVDKILE 585


>gi|25028444|ref|NP_738498.1| prolyl-tRNA synthetase [Corynebacterium efficiens YS-314]
 gi|259507503|ref|ZP_05750403.1| proline--tRNA ligase [Corynebacterium efficiens YS-314]
 gi|81846817|sp|Q8FP97|SYP_COREF RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|23493729|dbj|BAC18698.1| putative prolyl-tRNA synthetase [Corynebacterium efficiens YS-314]
 gi|259164888|gb|EEW49442.1| proline--tRNA ligase [Corynebacterium efficiens YS-314]
          Length = 588

 Score =  133 bits (334), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 40/203 (19%), Positives = 81/203 (39%), Gaps = 11/203 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +  +A    GV  W   G +  + +   +R ++     +E+  P 
Sbjct: 19  DAEVPSHKLLVRAGYIRRVA---PGVYSWLPLGLRALRNIEQVVREEMDAIGGQELLFPG 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++ +  W  Y  ++F +K      +    + L P +     +       SY++ 
Sbjct: 76  LLPREPYETTQRWTEYGDSLFRLKD-----RKGADYLLGPTHEEMFASTVKDLYSSYKDF 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKD 417
           PV L +  + YR+E      G++R R F   D++ F   +    E    H      I+  
Sbjct: 131 PVTLYQIQTKYRDEERPR-AGILRGREFVMKDSYSFDMTDAGLEESYARHRAAYQRIFDR 189

Query: 418 FGFEKIMVKLSTRPEKRVGSDAL 440
            G E ++ K ++       S+  
Sbjct: 190 LGIEYVICKATSGAMGGSASEEF 212



 Score = 90.2 bits (222), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 70/175 (40%), Gaps = 12/175 (6%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           P  E      + R  + G I Q+       F+   ++ + ++  P M    +   + R +
Sbjct: 411 PAPEGQGTLTLARGIEIGHIFQLGRKYTEAFDVQILDENGKRAIPTMGSYGI--GVSRLL 468

Query: 536 GIMIENFKG----NLPLWLSPIQAIVTTITSSA--VEYAQEIANLLKSHHLSIETDFRNE 589
            ++ E        N    ++P Q  V      A  +E A+  A  L    + +  D R +
Sbjct: 469 AVLAEQRHDEAGLNWSPAVAPYQVHVVAANKDAAAIEAAERYATELSQAGIDVLFDDRPK 528

Query: 590 -TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +   K ++  +  +P  +I G +  ++ ++ +R  G   T+ + + +A+  + +
Sbjct: 529 VSPGVKFKDAELLGMPFALILG-RGYADGTVELRVRGGEKTE-LPVDEAVETIVR 581


>gi|56708459|ref|YP_170355.1| prolyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110670930|ref|YP_667487.1| prolyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC198]
 gi|224457616|ref|ZP_03666089.1| prolyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|254371083|ref|ZP_04987085.1| hypothetical protein [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254875304|ref|ZP_05248014.1| prolyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|81820763|sp|Q5NF37|SYP_FRATT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|123359400|sp|Q14GJ0|SYP_FRAT1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|56604951|emb|CAG46045.1| Prolyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110321263|emb|CAL09428.1| Prolyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC198]
 gi|151569323|gb|EDN34977.1| hypothetical protein FTBG_00840 [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254841303|gb|EET19739.1| prolyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|282159660|gb|ADA79051.1| prolyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           NE061598]
          Length = 565

 Score =  133 bits (334), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 50/257 (19%), Positives = 93/257 (36%), Gaps = 27/257 (10%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            TQ  +       +E+    H+ + +   +  +A   SG+  W   G K+ Q + + +R 
Sbjct: 3   ATQTLIATTKELPKEAVLISHQYMLKAGLIKKLA---SGIYTWMPLGLKVLQKIQNIVRD 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P +L   L Q++  WD +   +  +       +  R F   P +    
Sbjct: 60  EMNKAGASELLLPSILPSELLQETHRWDKFGPELLKLHD-----RHNRDFCYGPTHEEPI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           V +    +KSY++LP+ L +  + +R+E      G+MR R F   DA+ F    Q     
Sbjct: 115 VDMARDTIKSYKQLPLNLYQIQTKFRDEIRPRF-GVMRAREFIMKDAYSFHENSQCLRNT 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++    +I    G     VK  T       S         ++    + I        
Sbjct: 174 YNTMYATYCNILDKIGLAYRPVKADTGAIGGDNSHEF-----QVLANAGEDI-------- 220

Query: 464 NTGVLLGEGAFYGPKFE 480
              +    G+ Y    E
Sbjct: 221 ---ICYSNGSDYAANIE 234



 Score = 84.1 bits (206), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 23/152 (15%), Positives = 55/152 (36%), Gaps = 8/152 (5%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL---SPIQ 554
           ++       NA  +     K  P+++    FG        + ++   N  +W    +P Q
Sbjct: 415 LEDVYSKPMNANIIGQDG-KSKPMLMGCYGFGVSRVMAAAIEQSHDENGIIWPESIAPYQ 473

Query: 555 AIVTTITSSAVEYAQEIANLLKSH----HLSIETDFRNETINYKIREHSIKKIPIIIICG 610
             +  I  +  +  +E+A+ L        + +  D R         +  +      ++ G
Sbjct: 474 VAILPINYNKSDKIKEVADKLYQDLLGDGIDVLLDDRGARPGVMFADADLIGYSHHVVIG 533

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           D+   +  I  +   +   Q++++ + I IL 
Sbjct: 534 DRLLEQGLIEYKNRKTQEKQEITIAELIKILK 565


>gi|288800296|ref|ZP_06405754.1| phosphoribulokinase family protein [Prevotella sp. oral taxon 299
           str. F0039]
 gi|288332509|gb|EFC70989.1| phosphoribulokinase family protein [Prevotella sp. oral taxon 299
           str. F0039]
          Length = 556

 Score =  133 bits (334), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 43/240 (17%), Positives = 94/240 (39%), Gaps = 5/240 (2%)

Query: 2   PSDIKLTFPDGSIKN-FPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SI 59
              I++   +        + +T  D+   ++  +    ++  +N KV  +   V     +
Sbjct: 4   SELIQIHCKNNKKNENVTIGSTLFDIFPKLNLKMIHGPLSAKVNNKVEGMHYRVYRNKDV 63

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           E +    P  +     +   ++ +AV  ++   +V +   + +G+Y D    +P  S++ 
Sbjct: 64  EFLDITSPSGMRAYTRTLFFVLCKAVHDLYKGSKVVVEFPVSNGYYCDVQLGRPILSEDA 123

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +I+++MQEII    P  +     +    LF+ K +  KV++L+S     NV  Y   ++
Sbjct: 124 TKIKQRMQEIIDCKMPIRRFEQPTDDVIALFKKKGDEAKVKLLQSTGMLYNV-YYAIDDY 182

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            D   G  + +T Q+  F       G   R  S+      + G+     +    +     
Sbjct: 183 VDYYYGSLLTNTAQLYLFGLEFYENGLLLRVPSSSN--PEVLGSMIQQDKMFEMFREHHR 240


>gi|150391375|ref|YP_001321424.1| phosphoribulokinase/uridine kinase [Alkaliphilus metalliredigens
           QYMF]
 gi|149951237|gb|ABR49765.1| phosphoribulokinase/uridine kinase [Alkaliphilus metalliredigens
           QYMF]
          Length = 574

 Score =  133 bits (334), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 36/232 (15%), Positives = 92/232 (39%), Gaps = 2/232 (0%)

Query: 16  NFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIR 74
           ++    T  ++++     +    V   ++ ++ +L+  +  +  I+ I         V +
Sbjct: 37  DYESGITLEELSKEFQEEMDYLIVTATVDNQLKELNYQLYEDSDIQFIDVCHSIGSRVYQ 96

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDS 134
            S + +       ++   +V++   +  G Y +   ++P   +++ +I+ +M +IIA D 
Sbjct: 97  RSLSFVFIRVCMELFSGCKVSVEHSLSKGLYCELHYKRPLVEEDVKRIKNRMDDIIAEDV 156

Query: 135 PFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQV 194
            F K  +  ++A+++F    +  KV++L     K  + +Y+ G   +   G  V +TG +
Sbjct: 157 RFEKSRIPIDEAKDIFREYGQMGKVKLL-KYREKPYINMYQCGWLKNYFYGYMVPTTGYL 215

Query: 195 KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDH 246
           K F       G   +      +             ++ +      +    DH
Sbjct: 216 KAFELKYYAPGVIIQYPRIAALGQIPVFEEQPKLFKIFRESEKWGKILDVDH 267


>gi|237785730|ref|YP_002906435.1| prolyl-tRNA synthetase [Corynebacterium kroppenstedtii DSM 44385]
 gi|237758642|gb|ACR17892.1| Prolyl-tRNA synthetase [Corynebacterium kroppenstedtii DSM 44385]
          Length = 594

 Score =  133 bits (334), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 42/212 (19%), Positives = 83/212 (39%), Gaps = 11/212 (5%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
           +        ++E   H+ L R   +  IA    GV  W   G K+ + +   +R ++   
Sbjct: 14  VRTLREDPADAEVPSHKLLVRAGFIRRIA---PGVYSWLPLGLKVLRNIERIVREEMDGI 70

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
             +EI  P +L +  ++ +G W  Y   +F +K      +    + L P +         
Sbjct: 71  GAQEIELPALLPRDAYEVTGRWTEYGDALFRLKD-----RKKGDYLLGPTHEEIFTETVK 125

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
               SY++ PV L +  + YR+E      G++R R F   D++ F  K++   E  + H 
Sbjct: 126 GEYSSYKDFPVTLYQIQTKYRDEERPR-AGILRGREFVMCDSYSFDMKDEGLEESYQKHR 184

Query: 410 -LIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
                ++   G +  +   ++       S+  
Sbjct: 185 AAYQRMFNRLGLDYAICAATSGAMGGSASEEF 216



 Score = 78.7 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 34/163 (20%), Positives = 68/163 (41%), Gaps = 14/163 (8%)

Query: 492 QCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPL-W 549
           + G I Q+     + F    ++ + ++  P M    V   + R + ++ E +  +  L W
Sbjct: 434 EIGHIFQLGRKYTNAFELDVLDENGKRSRPTMGSYGV--GVSRLVAVVAEQYHDDKGLKW 491

Query: 550 LS-----PIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKI 603
                  P+  +V    + A E A  +A  L +  L I  D R + +   K ++  +  +
Sbjct: 492 PVSVAPFPVHLVVANKDAEAAEAASTLAEELSNRGLDILFDDRPKVSPGVKFKDSELLGM 551

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA---IPILTK 643
           P +++ G +   E  I +R   + + + V + DA   I  L K
Sbjct: 552 PYVVVLG-RAFKEGKIEVRDRLADSVETVPVDDAAEHIARLVK 593


>gi|145295898|ref|YP_001138719.1| prolyl-tRNA synthetase [Corynebacterium glutamicum R]
 gi|166980117|sp|A4QF01|SYP_CORGB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|140845818|dbj|BAF54817.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 588

 Score =  133 bits (334), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 41/209 (19%), Positives = 83/209 (39%), Gaps = 11/209 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +  +A    G+  W   G +  + + + +R ++     +E+  P 
Sbjct: 19  DAEVPSHKLLVRAGYIRRVA---PGIYSWLPLGLRAVRNIEAVVREEMDAIGGQELLFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++ +  W  Y  ++F +K      +    + L P +     A       SY++ 
Sbjct: 76  LLPREPYETTQRWTEYGDSLFRLKD-----RKGADYLLGPTHEEMFAATVKDLYNSYKDF 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKD 417
           PV L +  + YR+E       L R R F   D++ F   +   +E    H      I+  
Sbjct: 131 PVTLYQIQTKYRDEERPRAGVL-RGREFVMKDSYSFDMSDAGLDESYAKHRAAYQRIFDR 189

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
            G E  + + ++       S+     +EN
Sbjct: 190 LGLEYAICQATSGAMGGSASEEFLAVSEN 218



 Score = 84.1 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 67/163 (41%), Gaps = 12/163 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I Q+       F+   ++ + ++  P M    +   + R + ++ E    +  
Sbjct: 423 RGIEIGHIFQLGRKYTEAFDVQILDENGKRAIPTMGSYGL--GVTRLLAVLAEQRHDDAG 480

Query: 548 L-W---LSPIQAIVTTITSSA--VEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSI 600
           L W   ++P Q  V      A  +E A+  A  L +  L +  D R + +   K ++  +
Sbjct: 481 LNWSVEVAPYQVHVVAANKDAAAIEAAERFAAELSAAGLDVLFDDRPKVSPGVKFKDAEL 540

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             +P  +I G +  +E  + +R  G   ++ +    A+  + +
Sbjct: 541 LGMPFALILG-RGYAEGKVELRVRGGEKSE-LDADQAVAQIVE 581


>gi|134301543|ref|YP_001121511.1| prolyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           WY96-3418]
 gi|166980125|sp|A4IWT9|SYP_FRATW RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|134049320|gb|ABO46391.1| prolyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           WY96-3418]
          Length = 565

 Score =  133 bits (334), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 50/257 (19%), Positives = 93/257 (36%), Gaps = 27/257 (10%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            TQ  +       +E+    H+ + +   +  +A   SG+  W   G K+ Q + + +R 
Sbjct: 3   ATQTLIATTKELPKEAVLISHQYMLKAGLIKKLA---SGIYTWMPLGLKVLQKIQNIVRD 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P +L   L Q++  WD +   +  +       +  R F   P +    
Sbjct: 60  EMNKAGASELLLPSILPSELLQETHRWDKFGPELLKLHD-----RHNRDFCYGPTHEEPI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           V +    +KSY++LP+ L +  + +R+E      G+MR R F   DA+ F    Q     
Sbjct: 115 VDMARDTIKSYKQLPLNLYQIQTKFRDEIRPRF-GVMRAREFIMKDAYSFHENSQCLRNT 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++    +I    G     VK  T       S         ++    + I        
Sbjct: 174 YNTMYATYCNILDKIGLAYRPVKADTGAIGGDNSHEF-----QVLANAGEDI-------- 220

Query: 464 NTGVLLGEGAFYGPKFE 480
              +    G+ Y    E
Sbjct: 221 ---ICYSNGSDYAANIE 234



 Score = 83.7 bits (205), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 23/152 (15%), Positives = 55/152 (36%), Gaps = 8/152 (5%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL---SPIQ 554
           ++       NA  +     K  P+++    FG        + ++   N  +W    +P Q
Sbjct: 415 LEDVYSKPMNANIIGQDG-KSKPMLMGCYGFGVSRVMAAAIEQSHDENGIIWPESIAPYQ 473

Query: 555 AIVTTITSSAVEYAQEIANLLKSH----HLSIETDFRNETINYKIREHSIKKIPIIIICG 610
             +  I  +  +  +E+A+ L        + +  D R         +  +      ++ G
Sbjct: 474 VAILPINYNKSDKIKEVADKLYQDLLGDGIDVLLDDRGARPGVMFADADLIGYSHHVVIG 533

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           D+   +  I  +   +   Q++++ + I IL 
Sbjct: 534 DRLLEQGLIEYKNRKTQEKQEITIAELIKILK 565


>gi|118497952|ref|YP_899002.1| prolyl-tRNA synthetase [Francisella tularensis subsp. novicida
           U112]
 gi|194323174|ref|ZP_03056958.1| prolyl-tRNA synthetase [Francisella tularensis subsp. novicida FTE]
 gi|152112922|sp|A0Q7N3|SYP_FRATN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|118423858|gb|ABK90248.1| prolyl-tRNA synthetase [Francisella novicida U112]
 gi|194322538|gb|EDX20018.1| prolyl-tRNA synthetase [Francisella tularensis subsp. novicida FTE]
          Length = 565

 Score =  133 bits (334), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 50/257 (19%), Positives = 93/257 (36%), Gaps = 27/257 (10%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            TQ  +       +E+    H+ + +   +  +A   SG+  W   G K+ Q + + +R 
Sbjct: 3   ATQTLIATTKELPKEAVLISHQYMLKAGLIKKLA---SGIYTWMPLGLKVLQKIQNIVRD 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P +L   L Q++  WD +   +  +       +  R F   P +    
Sbjct: 60  EMNKAGASELLLPSILPSELLQETHRWDKFGPELLKLHD-----RHNRDFCYGPTHEEPI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           V +    +KSY++LP+ L +  + +R+E      G+MR R F   DA+ F    Q     
Sbjct: 115 VDMARDTIKSYKQLPLNLYQIQTKFRDEIRPRF-GVMRAREFIMKDAYSFHENSQCLRNT 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++    +I    G     VK  T       S         ++    + I        
Sbjct: 174 YNTMYATYCNILDKIGLAYRPVKADTGAIGGDNSHEF-----QVLANAGEDI-------- 220

Query: 464 NTGVLLGEGAFYGPKFE 480
              +    G+ Y    E
Sbjct: 221 ---ICYSNGSDYAANIE 234



 Score = 84.1 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 24/152 (15%), Positives = 56/152 (36%), Gaps = 8/152 (5%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL---SPIQ 554
           ++       NA  +     K  P+++    FG        + ++   N  +W    +P Q
Sbjct: 415 LEDVYSKPMNANIIGQDG-KSKPMLMGCYGFGVSRVMAAAIEQSHDENGIIWPESIAPYQ 473

Query: 555 AIVTTITSSAVEYAQEIANLLKSH----HLSIETDFRNETINYKIREHSIKKIPIIIICG 610
             +  I  +  +  +E+A+ L        + +  D R         +  +      ++ G
Sbjct: 474 VAILPINYNKSDKVKEVADKLYQDLLGDGIDVLLDDRGARPGVMFADADLIGYSHHVVIG 533

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           D+   +  I  +   +   Q++++ + I ILT
Sbjct: 534 DRLLEQGLIEYKNRKTQEKQEITITELIKILT 565


>gi|156548890|ref|XP_001606543.1| PREDICTED: similar to ENSANGP00000011343 [Nasonia vitripennis]
          Length = 430

 Score =  133 bits (334), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 72/400 (18%), Positives = 155/400 (38%), Gaps = 30/400 (7%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I+   +G+  +   G +  Q LI+ + +++     ++I  P +   +LWQQ+      ++
Sbjct: 41  ISNVATGMYAFLPLGLRSLQKLINLIDQEMTAIGAQKILLPVLTQTNLWQQTARLKQAQS 100

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSG 375
            +F +       +  + F L P        + +  G    ++LP+RL +  S +R+E   
Sbjct: 101 ELFMLND-----RHGKEFLLSPTYEESISNMISQVGPLQRKQLPLRLYQTSSKWRDEIKP 155

Query: 376 SLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
            L GL+R R F   D + F    +       ++ +    I++  G     V   T     
Sbjct: 156 RL-GLLRSREFIMKDLYTFDLDADSAKCTYEEVSDAYKKIFERIGIPYKKVIADTGIIGG 214

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
             S      + +I + V+ + K S +  ++            PK E  L      +    
Sbjct: 215 SISHEYHYVS-DIGEDVILSCK-SCKYEVDKVDEPKTR---CPKCEEPLISTNSIEV-GH 268

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG-SIERFIGIMIE----NFKGNLPLW 549
           T  +         A +V+S+ +K     +    +G  + R +   IE    N +   PL 
Sbjct: 269 TFLLGTKYSKPLKATFVDSNCKKQ---FLEMGCYGLGLTRILATAIEILSTNLEIRWPLE 325

Query: 550 LSPIQAIVTTITSSAVEYAQ-----EIANLLKSHHLSIETDFR-NETINYKIREHSIKKI 603
           L+P    V      + E A+     ++ + +++ +L +  D R + TI  +  +      
Sbjct: 326 LAPHSICVIPPKKGSKEEAKAQLAYDVYSTIQNCNLDVIFDDRVDMTIGKRFIDARKTGY 385

Query: 604 PIIIICGDKEASER-SIGIRRFGSTTTQKVSLLDAIPILT 642
           P++II G    +++  + +      +   ++L + +  + 
Sbjct: 386 PVVIIIGKSCLADKPLVEVHNVYKASHVNLALENVVEHVK 425


>gi|254374768|ref|ZP_04990249.1| hypothetical protein FTDG_00943 [Francisella novicida GA99-3548]
 gi|151572487|gb|EDN38141.1| hypothetical protein FTDG_00943 [Francisella novicida GA99-3548]
          Length = 565

 Score =  133 bits (334), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 50/257 (19%), Positives = 93/257 (36%), Gaps = 27/257 (10%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            TQ  +       +E+    H+ + +   +  +A   SG+  W   G K+ Q + + +R 
Sbjct: 3   ATQTLIATTKELPKEAVLISHQYMLKAGLIKKLA---SGIYTWMPLGLKVLQKIQNIVRD 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P +L   L Q++  WD +   +  +       +  R F   P +    
Sbjct: 60  EMNKAGASELLLPSILPSELLQETHRWDKFGPELLKLHD-----RHNRDFCYGPTHEEPI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           V +    +KSY++LP+ L +  + +R+E      G+MR R F   DA+ F    Q     
Sbjct: 115 VDMARDTIKSYKQLPLNLYQIQTKFRDEIRPRF-GVMRAREFIMKDAYSFHENSQCLRNT 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++    +I    G     VK  T       S         ++    + I        
Sbjct: 174 YNTMYATYCNILDKIGLAYRPVKADTGAIGGDNSHEF-----QVLANAGEDI-------- 220

Query: 464 NTGVLLGEGAFYGPKFE 480
              +    G+ Y    E
Sbjct: 221 ---ICYSNGSDYAANIE 234



 Score = 84.8 bits (208), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 24/152 (15%), Positives = 56/152 (36%), Gaps = 8/152 (5%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL---SPIQ 554
           ++       NA  +     K  P+++    FG        + ++   N  +W    +P Q
Sbjct: 415 LEDVYSKPMNANIIGQDG-KSKPMLMGCYGFGVSRVMAAAIEQSHDENGIIWPESIAPYQ 473

Query: 555 AIVTTITSSAVEYAQEIANLLKSH----HLSIETDFRNETINYKIREHSIKKIPIIIICG 610
             +  I  +  +  +E+A+ L        + +  D R         +  +      ++ G
Sbjct: 474 VAILPINYNKSDKVKEVADKLYQDLLGDGIDVLLDDRGARPGVMFADADLIGYSHHVVIG 533

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           D+   +  I  +   +   Q++++ + I ILT
Sbjct: 534 DRLLEQGLIEYKNRKTQEKQEITIAELIKILT 565


>gi|296330872|ref|ZP_06873347.1| prolyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305674390|ref|YP_003866062.1| prolyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|296151877|gb|EFG92751.1| prolyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305412634|gb|ADM37753.1| prolyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 564

 Score =  133 bits (334), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 48/203 (23%), Positives = 88/203 (43%), Gaps = 11/203 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E + H+ L R      I ++ SGV  +    +K+ Q +   +R +++  D  E+  P 
Sbjct: 17  DAEAKSHQLLLRAG---FIRQNTSGVYSYMPLAYKVIQNIQQIVREEMEKIDAVEMLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +     WQ+SG W +Y   +  +K      +  R FAL   +     ++    +KSY+ L
Sbjct: 74  LQQAETWQESGRWYTYGPELMRLKD-----RHGREFALGATHEEVITSLVRDEVKSYKRL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKD 417
           P+ L +  S +R+E      GL+R R F   DA+ F   E+  +E   K++    +I+  
Sbjct: 129 PLTLYQIQSKFRDEKRPRF-GLLRGREFIMKDAYSFHATEESLDETYQKMYEAYSNIFAR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDAL 440
            G     V   +       +   
Sbjct: 188 CGINVRPVIADSGAMGGKDTHEF 210



 Score = 81.0 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 25/153 (16%), Positives = 58/153 (37%), Gaps = 8/153 (5%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI- 556
           +        NA Y++ +  +  P+++     G       I  ++      +W   +    
Sbjct: 414 LGTRYSEAMNATYLDENG-RAQPMLMGCYGVGVSRTLSAIAEQHHDDKGLIWPKSVAPYD 472

Query: 557 -----VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
                +     S  E A+++   LK+    +  D R E    K  +  +  +PI I  G 
Sbjct: 473 LHILALNMKNDSQRELAEKLYANLKAEGYEVLYDDRAERAGVKFADSDLIGLPIRITVGK 532

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           + A E  + ++   +  + +VS+ +    ++K+
Sbjct: 533 R-ADEGIVEVKIRQTGESTEVSVDELTAFISKQ 564


>gi|300087319|ref|YP_003757841.1| prolyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
 gi|299527052|gb|ADJ25520.1| prolyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
          Length = 573

 Score =  133 bits (334), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 52/230 (22%), Positives = 93/230 (40%), Gaps = 11/230 (4%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-D 290
                   E+E   HR L R      IA+  +GV  +    W+  + ++  +R ++    
Sbjct: 9   KTQREIPGEAETISHRLLLRAGM---IAQLTAGVYSYLPPAWRTSRKIMDIIRDEMDAAG 65

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH 350
            +EI  P +    LWQ+SG   ++  N+F +    +        AL P +      + + 
Sbjct: 66  CQEITMPVLQPIELWQKSGRGAAFGDNLFQLTDRKEHT-----LALGPTHEEVVSDLASR 120

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHN 409
            ++SYR+LP RL +  +  R+EP     GL+RVR F   D + F   E    E   ++  
Sbjct: 121 YIQSYRDLPQRLYQIQTKLRDEPRPR-GGLIRVREFIMKDMYSFDADEAGLEESYQRMVQ 179

Query: 410 LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSS 459
              +IY+  G + + ++  +       S      AE+    V+       
Sbjct: 180 AYKNIYRRCGLKAMAIEADSGAIGGKASHEFMVLAESGEDEVIFCAGCGY 229



 Score = 81.4 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 62/163 (38%), Gaps = 10/163 (6%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNL 546
           R  + G +  +   L   F A Y ++   +  P ++     G I R +   IE N     
Sbjct: 400 RGIEVGHVFKLGTFLAETFGAVYTDAEGNQK-PCIMGCYGIG-IGRLLAAAIEQNHDDKG 457

Query: 547 PLWL---SPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
            +W    +P Q  +T +          A+++   L S  + +  D R E+   K  +  +
Sbjct: 458 IIWPMPIAPWQVHLTGLGLENEPVRAAAEKLYGELTSAGIEVLYDDRPESPGVKFNDADL 517

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             +P+ +    +   + S+ +++      + V   + + +  K
Sbjct: 518 LGMPLRLTISPRSMDKGSVEVKQRAEKAFELVPADEVVEVTRK 560


>gi|187931393|ref|YP_001891377.1| prolyl-tRNA synthetase [Francisella tularensis subsp. mediasiatica
           FSC147]
 gi|226701291|sp|B2SFQ6|SYP_FRATM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|187712302|gb|ACD30599.1| prolyl-tRNA synthetase [Francisella tularensis subsp. mediasiatica
           FSC147]
          Length = 565

 Score =  133 bits (334), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 50/257 (19%), Positives = 93/257 (36%), Gaps = 27/257 (10%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            TQ  +       +E+    H+ + +   +  +A   SG+  W   G K+ Q + + +R 
Sbjct: 3   ATQTLIATTKELPKEAVLISHQYMLKAGLIKKLA---SGIYTWMPLGLKVLQKIQNIVRD 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P +L   L Q++  WD +   +  +       +  R F   P +    
Sbjct: 60  EMNKAGASELLLPSILPSELLQETHRWDKFGPELLKLHD-----RHNRDFCYGPTHEEPI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           V +    +KSY++LP+ L +  + +R+E      G+MR R F   DA+ F    Q     
Sbjct: 115 VDMARDTIKSYKQLPLNLYQIQTKFRDEIRPRF-GVMRAREFIMKDAYSFHENSQCLRNT 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++    +I    G     VK  T       S         ++    + I        
Sbjct: 174 YNTMYATYCNILDKIGLAYRPVKADTGAIGGDNSHEF-----QVLANAGEDI-------- 220

Query: 464 NTGVLLGEGAFYGPKFE 480
              +    G+ Y    E
Sbjct: 221 ---ICYSNGSDYAANIE 234



 Score = 85.2 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 24/152 (15%), Positives = 55/152 (36%), Gaps = 8/152 (5%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL---SPIQ 554
           ++       NA  +     K  P+++    FG        + ++   N  +W    +P Q
Sbjct: 415 LEDVYSKPMNANIIGQDG-KSKPMLMGCYGFGVSRVMAAAIEQSHDENGIIWPESIAPYQ 473

Query: 555 AIVTTITSSAVEYAQEIANLLKSH----HLSIETDFRNETINYKIREHSIKKIPIIIICG 610
             +  I  +  +  +E+A+ L        + +  D R         +  +      ++ G
Sbjct: 474 VAILPINYNKSDKVKEVADKLYQDLLGDGIDVLLDDRGARPGVMFADADLIGYSHHVVIG 533

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           DK   +  I  +   +   Q++++ + I IL 
Sbjct: 534 DKLLEQGLIEYKNRKTQEKQEITIAELIKILK 565


>gi|302206413|gb|ADL10755.1| Putative prolyl-tRNA synthetase [Corynebacterium pseudotuberculosis
           C231]
 gi|302330969|gb|ADL21163.1| Putative prolyl-tRNA synthetase [Corynebacterium pseudotuberculosis
           1002]
 gi|308276656|gb|ADO26555.1| Putative prolyl-tRNA synthetase [Corynebacterium pseudotuberculosis
           I19]
          Length = 585

 Score =  133 bits (334), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 41/230 (17%), Positives = 84/230 (36%), Gaps = 11/230 (4%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +        GV  W   G +  + + + +R ++     +E+  P 
Sbjct: 19  DAEVPSHKLLVRAGYIR---RAAPGVYTWLPLGLRTLKKIENIVREEMDGIGAQELLFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  +Q +  W  Y  ++F +K      +    + L P +             SY++ 
Sbjct: 76  LLPREPYQATNRWTEYGDSLFRLKD-----RKGADYLLGPTHEEMFAGAVKDMYSSYKDF 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKD 417
           PV L +  + YR+E      G++R R F   D++ F   +       + H      I   
Sbjct: 131 PVTLYQIQTKYRDEERPR-AGILRGREFVMKDSYSFDMTDDGLESSYQRHRGAYQRILDR 189

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGV 467
            G E  +   ++       S+     +EN     +   + +    +   V
Sbjct: 190 LGVEYAICSATSGAMGGSASEEFLAISENGEDTFVRATQGNYAANVEAVV 239



 Score = 82.5 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 29/211 (13%), Positives = 79/211 (37%), Gaps = 12/211 (5%)

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI-QVD 499
           W    +  +  +  +       + + +   E     P  E      + R  + G I Q+ 
Sbjct: 375 WITGADADQRHVINLTVGRDFEVESYIEAAEVREGDPAPEGQGTLTLARGIEVGHIFQLG 434

Query: 500 FNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG----NLPLWLSP--I 553
                 F+   ++ + ++  P M    +   + R + ++ E        N P+ ++P  +
Sbjct: 435 RKYTEAFDVQILDENGKRAIPTMGSYGI--GVSRLMAVLAEQRHDEKGLNWPIEVAPFAV 492

Query: 554 QAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDK 612
             +V    ++A+E    + + L +  + +  D R + +   K ++  +  +P +++ G +
Sbjct: 493 HVVVANKDTAAIEAGDALVSELDAAGVEVLFDDRPKVSPGVKFKDAELLGMPYVVVLG-R 551

Query: 613 EASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              E  + +R  G    + +   +A   +  
Sbjct: 552 SFKEGKVELRVRGEEAVE-IPAAEAAARIID 581


>gi|303232756|ref|ZP_07319441.1| proline--tRNA ligase [Atopobium vaginae PB189-T1-4]
 gi|302481242|gb|EFL44317.1| proline--tRNA ligase [Atopobium vaginae PB189-T1-4]
          Length = 574

 Score =  133 bits (334), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 45/163 (27%), Positives = 73/163 (44%), Gaps = 10/163 (6%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
            HR L R   +    +  SG+  +    W+    +   +R +++  D +E+ TP +    
Sbjct: 26  SHRLLCRAGMIR---KAASGLYTYLPLAWRSILKIEGIIRDEMEAIDCQEMLTPILTSAE 82

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW QSG WD Y   +  +    D       +AL P +   +V +    L+SY++LPV L 
Sbjct: 83  LWHQSGRWDVYGPELMRLTDRHDH-----EYALGPTHEETYVDLVRSELRSYKQLPVTLY 137

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
                +R+E      GLMR R F   DA+ FC  ++   +C  
Sbjct: 138 HIQDKFRDERRPRF-GLMRSREFIMKDAYSFCATQESLQQCYD 179



 Score = 89.1 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 38/253 (15%), Positives = 80/253 (31%), Gaps = 17/253 (6%)

Query: 406 KIHNLIISIYKDFGFEKIMVKLST-RPEKRVGSDALWDDAENIMKGVLDTI--------K 456
           + H +       FG  K  +       +  V  D    DA   + G  +           
Sbjct: 314 EYHMMDDEELTQFGLVKGFIGPINLPQDVHVYQDISLQDATTWICGANEVDYHLVGAVPG 373

Query: 457 NSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE 516
              +      V+  +     P+    LK A G +      Q+     S   A +++    
Sbjct: 374 RDFELGEYVDVVSAQAGDGCPRCAASLKSARGIEIS-QVFQLGTKYSSAMGATFMDEDGT 432

Query: 517 KCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL---SPIQAIVT---TITSSAVEYAQE 570
           +  P ++     G       ++ +++  +  +W    +P +  V    T        A  
Sbjct: 433 EK-PFIMGCYGIGVSRTLAAVVEQHYDDHGIIWPISVAPYEVEVIALDTNDDVIWPQATA 491

Query: 571 IANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
           IA  L +  + +  D R      K  +  +   P  ++CG K      + ++     +  
Sbjct: 492 IAEKLTARGIEVIVDDRELRPGVKFNDADLMGFPYQVVCGKKALERGCVELKCRADGSRV 551

Query: 631 KVSLLDAIPILTK 643
           +V+L   +  L +
Sbjct: 552 EVALDAIVSELEQ 564


>gi|237709524|ref|ZP_04540005.1| uridine kinase [Bacteroides sp. 9_1_42FAA]
 gi|237724881|ref|ZP_04555362.1| uridine kinase [Bacteroides sp. D4]
 gi|265754732|ref|ZP_06089784.1| uridine kinase [Bacteroides sp. 3_1_33FAA]
 gi|229436619|gb|EEO46696.1| uridine kinase [Bacteroides dorei 5_1_36/D4]
 gi|229456580|gb|EEO62301.1| uridine kinase [Bacteroides sp. 9_1_42FAA]
 gi|263234846|gb|EEZ20414.1| uridine kinase [Bacteroides sp. 3_1_33FAA]
          Length = 554

 Score =  133 bits (334), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 47/227 (20%), Positives = 95/227 (41%), Gaps = 2/227 (0%)

Query: 15  KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVI 73
           KNFP+ ++  D+    +  +    V+  +N KV  L+        +E +   +P  +   
Sbjct: 13  KNFPIGSSLLDIYNGFNLDIPYGPVSAKVNNKVEGLNYRAYNNKDVEFLNMLNPSGMRTY 72

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
             S   I+ +AV+ ++P+ ++ +   +  G+Y D         D++++I+++M+EI+  +
Sbjct: 73  VRSLCFILCKAVEDLYPDGKIMLEHPVSKGYYCDLQIGHETGLDDVSRIKQRMKEIVEAN 132

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQ 193
            PF +      K  ELF  K    KV++LE+   +     Y      D   G  + STG 
Sbjct: 133 IPFHRFECHTTKVVELFCRKGMMDKVKLLET-SGELYSYYYTLENTIDYYYGSLLPSTGY 191

Query: 194 VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           ++KF  +    G   R  + +               E+ +      +
Sbjct: 192 IRKFDIVKYYDGLLLRVPNRQNPEVLEEVVKQEKMLEVFKEHRRWNQ 238


>gi|328947999|ref|YP_004365336.1| ATPase AAA [Treponema succinifaciens DSM 2489]
 gi|328448323|gb|AEB14039.1| AAA ATPase [Treponema succinifaciens DSM 2489]
          Length = 550

 Score =  132 bits (333), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 56/241 (23%), Positives = 98/241 (40%), Gaps = 5/241 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
             IK+TFPD S              E  +    KK VAV +N ++C L  PV    SIE 
Sbjct: 2   KKIKITFPDNSFIEAENEIRPILFLEKFNAQ-NKKIVAVKVNNEICSLDSPVNITSSIEP 60

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +  +     ++ R S   ++A A   I+P  ++ +G  +  G+YY  +   P + + + +
Sbjct: 61  VFSDSKDGSSIYRRSLCFVLAAAAHKIFPGKRLLVGHSLGYGYYYTLELGTPLTKENILK 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKK-EAYKVEILESIPAKENVTLYRQGEWF 180
           ++ +M++II  D      ++S+ +A  LFE       + ++    P+   V + R   + 
Sbjct: 121 LKNEMEQIIKYDKIIETDFISYSEACSLFEELGLTETRKQLNYRCPS--RVQINRLEGFS 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           DL  GP V +TG +  F  L    G   R                    E+ +      +
Sbjct: 179 DLYFGPLVGTTGILNVFDLLPYSDGFLLRFPKKGHPEKLTEFVDQPKLFEIYKSYKLWGK 238

Query: 241 S 241
            
Sbjct: 239 R 239


>gi|150019972|ref|YP_001305326.1| prolyl-tRNA synthetase [Thermosipho melanesiensis BI429]
 gi|166980168|sp|A6LJ40|SYP_THEM4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|149792493|gb|ABR29941.1| prolyl-tRNA synthetase [Thermosipho melanesiensis BI429]
          Length = 564

 Score =  132 bits (333), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 53/244 (21%), Positives = 88/244 (36%), Gaps = 13/244 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q           ++E      L R   +  IA    GV  +     +    + + +R 
Sbjct: 3   FSQLYAPTLRENPADAEIPSQALLQRAGFIRKIAA---GVYTYLPLARRTLLKIENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +EI  P +    LW +SG WD Y   M  +K      +  R F L P +    
Sbjct: 60  EMDRIGAQEILMPIIQPAELWIKSGRWDDYGPEMMKLKD-----RHNRDFTLGPTHEELV 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
             +  + L SY++LPV L +  + YR+E       L R R F   DA+ F    E +   
Sbjct: 115 TELVKNELNSYKQLPVTLYQIANKYRDEIRPRFGVL-RAREFIMKDAYSFHDSWESLDEV 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL--DTIKNSSQD 461
             K       I +  G    +++ S+       S      AE     +L  D     S +
Sbjct: 174 YKKFKEAYSRILERIGLRYTVIEASSGAIGGKESHEFVAFAEYGESNILYCDCGYAGSDE 233

Query: 462 RINT 465
           ++  
Sbjct: 234 KVPY 237



 Score = 73.7 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 23/155 (14%), Positives = 58/155 (37%), Gaps = 7/155 (4%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I  +        +  Y+N   +   P ++    +G       I+ +    N  
Sbjct: 402 RGIELGHIFKLGTKYSETMDVKYMNKDGKMK-PFIMGCYGWGISRTLGAIVEQLHDDNGI 460

Query: 548 LWL---SPIQAIVTTITSSAVE-YAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           +W    +P + ++T +     + +A+++   L    + +  D R+ +   K ++  +   
Sbjct: 461 IWPVSVAPYEVVITVVGKENEKSFAEKLYRYLLDKGVDVLIDDRDVSPGVKFKDADLIGF 520

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           P+ I  G K   +  + ++      T   +  + I
Sbjct: 521 PLRITIG-KSYKDGKVELKERVGNVTIIEADEEVI 554


>gi|304373259|ref|YP_003856468.1| Prolyl-tRNA synthetase 2 [Mycoplasma hyorhinis HUB-1]
 gi|304309450|gb|ADM21930.1| Prolyl-tRNA synthetase 2 [Mycoplasma hyorhinis HUB-1]
          Length = 480

 Score =  132 bits (333), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 60/421 (14%), Positives = 148/421 (35%), Gaps = 59/421 (14%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINT 296
             E   R +  + ++ + F       G I++    + +++ +   + +   +++ + +  
Sbjct: 10  WNEDFARWYVDVIKQAE-FMEYGPIKGTIYFKPNSFALWEKIQENLNKYFKRENVKNVYF 68

Query: 297 PQVLDQHL-WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P ++ Q    ++  H + +   +  +  A +  K      ++P +       F   L + 
Sbjct: 69  PLLIPQSFITKEKSHVEGFAPELLTITHAGEK-KLSEELYVRPTSEVLFADCFKKELANN 127

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT-KEQMFNECLKIHNLIISI 414
            +LP+   ++ SV R E   + +  +R   F   + H   +  E+      K+  +    
Sbjct: 128 NQLPLIYNQWTSVLRWEK--NTNPFLRTTEFLWQEGHTVHSNAEEAKRLAKKMIGIYKDF 185

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            +++    +++   T  E+  G++  +                                 
Sbjct: 186 IENYLAIPVIIGNKTERERFAGAEQTY--------------------------------- 212

Query: 475 YGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
                E ++KD  G+  Q GT      N    F+  + N  +E  +P   ++  +G   R
Sbjct: 213 ---TVEAMMKD--GKALQSGTSHYLAQNFSKSFDIVFKNDKNEFENP---YQTSWGVSTR 264

Query: 534 FIGIMIENFKGN----LPLWLSPIQAIVTTITSSAVEYAQEIANLLKSH---HLSIETDF 586
            IG +I     +    LP  ++PIQ  +  + +        +   +        ++  D 
Sbjct: 265 LIGGLIMTHGDDRGVILPPKIAPIQVDILELFAIKNPIVSIVTKQIFEKLKIKFTLRIDS 324

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL---DAIPILTK 643
            +    YK     +   P+ I  G ++  +  + I R  +    +V +    + +  L +
Sbjct: 325 TDNQPGYKASRSEVLGTPLRIEVGPRDLEKNQVTIVRRDTLEKHQVEVEKVFEKVEFLLE 384

Query: 644 E 644
           E
Sbjct: 385 E 385


>gi|297712850|ref|XP_002832939.1| PREDICTED: threonyl-tRNA synthetase, cytoplasmic-like [Pongo
           abelii]
          Length = 177

 Score =  132 bits (333), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 55/122 (45%), Positives = 73/122 (59%), Gaps = 7/122 (5%)

Query: 431 PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRD 490
            EK  G   +WD AE  ++  L+      +      +  G+GAFYGPK +  +KDAIGR 
Sbjct: 59  MEKFFGDIEVWDQAEKQLENSLNEFGEKWE------LNSGDGAFYGPKIDIQIKDAIGRY 112

Query: 491 WQCGTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW 549
            QC TIQ+DF LP RFN  YV+    +K  PV++HRA+ GS+ER I I+ EN+ G  P W
Sbjct: 113 HQCATIQLDFQLPIRFNLTYVSHDGDDKKKPVIVHRAILGSVERMIAILTENYGGKWPFW 172

Query: 550 LS 551
           LS
Sbjct: 173 LS 174



 Score = 39.8 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 10/36 (27%), Positives = 17/36 (47%)

Query: 252 EMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI 287
           + +L+   E   G  F+  KG  I+  LI ++  K 
Sbjct: 27  DQELYFFHELSPGSCFFLPKGAYIYNALIEFIMEKF 62


>gi|320096236|ref|ZP_08027820.1| proline--tRNA ligase [Actinomyces sp. oral taxon 178 str. F0338]
 gi|319976817|gb|EFW08576.1| proline--tRNA ligase [Actinomyces sp. oral taxon 178 str. F0338]
          Length = 594

 Score =  132 bits (333), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 37/203 (18%), Positives = 77/203 (37%), Gaps = 11/203 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +        G+  W   G +  + +   +R ++     +E++ P 
Sbjct: 19  DAEVNSHKLLVRAGYIR---RAAPGIYTWLPLGLRTLRKIEGIVREEMDRMGAQEVHFPG 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++    ++ +  W+ Y   +F +       +    + L P +      +      SY++L
Sbjct: 76  LIPAEPYKATNRWEDYGPTLFKL-----ADRKGGDYLLAPTHEEMFTLLVKDMYSSYKDL 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI-HNLIISIYKD 417
           P  L +  + YR+E      GL+R R F   DA+ F   E       +   +    I+  
Sbjct: 131 PTTLYQIQTKYRDEARPR-AGLIRGREFVMKDAYSFDIDEAGLEASYQAERDTYERIFTR 189

Query: 418 FGFEKIMVKLSTRPEKRVGSDAL 440
            G E ++V   +       S+  
Sbjct: 190 LGLEYVIVSAMSGAMGGSRSEEF 212


>gi|116492650|ref|YP_804385.1| prolyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745]
 gi|122265886|sp|Q03FS9|SYP_PEDPA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|116102800|gb|ABJ67943.1| Prolyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745]
          Length = 571

 Score =  132 bits (333), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 47/220 (21%), Positives = 92/220 (41%), Gaps = 11/220 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  ++       ++E   H+ + R   +  I+    G+  +    +K+   +   +R +
Sbjct: 4   SKILISTVKEVPNDAEVLSHKMMLRAGYIRQISA---GMYAYLPLAYKVISKIEKIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++  D  E+ TP VL   LW+QSG +++Y   ++  K   D     R F L P +     
Sbjct: 61  MEAIDAVEMLTPAVLPAELWKQSGRYETYGQELYKFKNRHD-----RDFILGPTHEETMT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    +KSY++LP+ L +    YR+E     +GL+R R F   DA+ F   E+  ++  
Sbjct: 116 TLIRDEVKSYKKLPLSLYQIQMKYRDEDRPR-YGLLRGREFLMKDAYSFHADEETLDQSF 174

Query: 406 KIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
           +       +I++  G     +           S      A
Sbjct: 175 RDFEKAYQNIFRRCGLNFREIVGDAGAMGGRDSKEFSAIA 214



 Score = 75.6 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 26/157 (16%), Positives = 57/157 (36%), Gaps = 11/157 (7%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL---SPIQ 554
           +        +A  ++ +  +  PV++     G       +  +    N  +W    +P  
Sbjct: 416 IGTKYSEALDAKVLDENG-RAIPVIMGCYGIGVSRLLSAVSEQQSDENGLVWPKNIAPYD 474

Query: 555 AIVTTITS---SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
             V  + +     +E A +I   L      +  D R E    K  +  +  IP+ +  G 
Sbjct: 475 VHVIPVNAKNAEQMEIADQINGELTKAGYDVLVDDRKERAGVKFADSDLIGIPLRVTIGK 534

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDA---IPILTKES 645
           K ASE  + ++   +    +V + +    + IL  ++
Sbjct: 535 K-ASEGIVEVKLRKTGEAVEVKVAELNNTVEILLNQA 570


>gi|45656749|ref|YP_000835.1| prolyl-tRNA synthetase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
 gi|81830828|sp|Q72U06|SYP_LEPIC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|45599985|gb|AAS69472.1| prolyl-tRNA synthetase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
          Length = 576

 Score =  132 bits (333), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 43/217 (19%), Positives = 88/217 (40%), Gaps = 11/217 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  L        ++    HR + R   +    +  +G+ F+   G K+ + +   +R 
Sbjct: 3   ASKYILPTEKENPADAVVASHRLMIRAGLVR---KSSAGLYFYLPLGLKVLKKIEQIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E + P +     W+QSG W +    MF ++   D       +AL P +    
Sbjct: 60  EMNSTGALEFDLPILTPSDFWEQSGRWSAMGKEMFRIQDRHDLS-----YALGPTHEESF 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    LKSY++LPV + +  + +R+E      G++R R F   DA+ F   +   ++ 
Sbjct: 115 SFLLKPLLKSYKDLPVNVYQIQTKFRDEIRPRF-GVIRSREFIMKDAYSFHIDDSSLDDT 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            + +      I+   G + I V+  +       S+  
Sbjct: 174 YQAMRVAYRKIFDRCGLKTIPVQADSGSMGGSASEEF 210



 Score = 64.0 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 66/184 (35%), Gaps = 14/184 (7%)

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
            P     LK   G +      ++       F    ++ + +          +   + R +
Sbjct: 393 CPNCSSPLKAEKGIEV-GHIFKLGDKYTKAFGIQVLDQNGKSKTLTTGCYGI--GVNRTM 449

Query: 536 GIMIENFKGN----LPLWLSPIQAIVTTITSSAVEYAQ--EIANLLKSHHLSIETDFRNE 589
             +IE          P+ ++P +  + +I     +Y++  E  N+L +  + +  D R+ 
Sbjct: 450 ATVIEQCNDEKGIFWPISIAPFEVSLVSIVKGEDQYSKIEEFYNVLINEGIEVFWDDRDL 509

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGI--RRFGSTTTQKVS-LLDAIPILTKESL 646
              +K+++  +   PI I  G K      I I  R+     +   S   D +  +  ES+
Sbjct: 510 GPGFKLKDSELIGFPIRITIGKKFFESGEISIYNRKKDQEDSFVFSGFDDLVARV--ESM 567

Query: 647 PPDC 650
             + 
Sbjct: 568 RQEL 571


>gi|208779640|ref|ZP_03246985.1| prolyl-tRNA synthetase [Francisella novicida FTG]
 gi|208744601|gb|EDZ90900.1| prolyl-tRNA synthetase [Francisella novicida FTG]
          Length = 565

 Score =  132 bits (333), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 50/257 (19%), Positives = 93/257 (36%), Gaps = 27/257 (10%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            TQ  +       +E+    H+ + +   +  +A   SG+  W   G K+ Q + + +R 
Sbjct: 3   ATQTLIATTKELPKEAVLISHQYMLKAGLIKKLA---SGIYTWMPLGLKVLQKIQNIVRD 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P +L   L Q++  WD +   +  +       +  R F   P +    
Sbjct: 60  EMNKAGASELLLPSILPSELLQETHRWDKFGPELLKLND-----RHNRDFCYGPTHEEPI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           V +    +KSY++LP+ L +  + +R+E      G+MR R F   DA+ F    Q     
Sbjct: 115 VDMARDTIKSYKQLPLNLYQIQTKFRDEIRPRF-GVMRAREFIMKDAYSFHENSQCLRNT 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++    +I    G     VK  T       S         ++    + I        
Sbjct: 174 YNTMYATYCNILDKIGLAYRPVKADTGAIGGDNSHEF-----QVLANAGEDI-------- 220

Query: 464 NTGVLLGEGAFYGPKFE 480
              +    G+ Y    E
Sbjct: 221 ---ICYSNGSDYAANIE 234



 Score = 82.5 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 24/152 (15%), Positives = 56/152 (36%), Gaps = 8/152 (5%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL---SPIQ 554
           ++       NA  +     K  P+++    FG        + ++   N  +W    +P Q
Sbjct: 415 LEDVYSKPMNANIIGQDG-KSKPMLMGCYGFGVSRVMAAAIEQSHDENGIIWPESIAPYQ 473

Query: 555 AIVTTITSSAVEYAQEIANLLKSH----HLSIETDFRNETINYKIREHSIKKIPIIIICG 610
             +  I  +  +  +E+A+ L        + +  D R         +  +      ++ G
Sbjct: 474 VAILPINYNKSDKVKEVADKLYQDLLGDGIDVLLDDRGARPGVMFADADLIGYSHHVVIG 533

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           D+   +  I  +   +   Q++++ + I ILT
Sbjct: 534 DRLLEQELIEYKNRKTQEKQEITIAELIKILT 565


>gi|332678669|gb|AEE87798.1| Prolyl-tRNA synthetase Bacterial type [Francisella cf. novicida
           Fx1]
          Length = 565

 Score =  132 bits (333), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 50/257 (19%), Positives = 93/257 (36%), Gaps = 27/257 (10%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            TQ  +       +E+    H+ + +   +  +A   SG+  W   G K+ Q + + +R 
Sbjct: 3   ATQTLIATTKELPKEAVLISHQYMLKAGLIKKLA---SGIYTWMPLGLKVLQKIQNIVRD 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P +L   L Q++  WD +   +  +       +  R F   P +    
Sbjct: 60  EMNKAGASELLLPSILPSELLQETHRWDKFGPELLKLHD-----RHNRDFCYGPTHEEPI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           V +    +KSY++LP+ L +  + +R+E      G+MR R F   DA+ F    Q     
Sbjct: 115 VDMARDTIKSYKQLPLNLYQIQTKFRDEIRPRF-GVMRAREFIMKDAYSFHENSQCLRNT 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++    +I    G     VK  T       S         ++    + I        
Sbjct: 174 YNTMYATYCNILDKIGLAYRPVKADTGAIGGDNSHEF-----QVLANAGEDI-------- 220

Query: 464 NTGVLLGEGAFYGPKFE 480
              +    G+ Y    E
Sbjct: 221 ---ICYSNGSDYAANIE 234



 Score = 84.4 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 23/152 (15%), Positives = 55/152 (36%), Gaps = 8/152 (5%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL---SPIQ 554
           ++       NA  +     K  P+++    FG        + ++   N  +W    +P Q
Sbjct: 415 LEDVYSKPMNANIIGQDG-KSKPMLMGCYGFGVSRVMAAAIEQSHDENGIIWPESIAPYQ 473

Query: 555 AIVTTITSSAVEYAQEIANLLKSH----HLSIETDFRNETINYKIREHSIKKIPIIIICG 610
             +  I  +  +  +E+A+ L        + +  D R         +  +      ++ G
Sbjct: 474 VAILPINYNKSDKVKEVADKLYQDLLGDGIDVLLDDRGARPGVMFADADLIGYSHHVVIG 533

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           D+   +  I  +   +   Q++++ + I IL 
Sbjct: 534 DRLLEQGLIEYKNRKTQEKQEITIAELIKILK 565


>gi|256545377|ref|ZP_05472740.1| proline--tRNA ligase [Anaerococcus vaginalis ATCC 51170]
 gi|256398938|gb|EEU12552.1| proline--tRNA ligase [Anaerococcus vaginalis ATCC 51170]
          Length = 565

 Score =  132 bits (333), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 47/209 (22%), Positives = 91/209 (43%), Gaps = 11/209 (5%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
           +++E + H+ L R   +   +   SGV  +   G K+   + + +R+ ++  D  E++T 
Sbjct: 9   QDAETQSHKLLVRGAFIRKTS---SGVYSYLPLGMKVINKIENIVRKSMEKYDSIEVSTS 65

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +  + +W++SG W ++   MF +K   D     R F L P        +    L SY++
Sbjct: 66  VLQSKDIWEKSGRWQNFGPEMFKIKDRHD-----REFCLGPTAEEQFTNLIKDELNSYKQ 120

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYK 416
           LP+ L +  S +R+E      G+ R R F   DA+ F    E +     K+ +  + ++ 
Sbjct: 121 LPLNLYQIVSKFRDEKRPRF-GINRSRDFIMKDAYSFDVDMEGLKKSYQKMWDAYVEVFD 179

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
               +  +V+  +       S      AE
Sbjct: 180 ALDLDYKIVEGDSGAMGGNISHEFMALAE 208



 Score = 84.1 bits (206), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 60/160 (37%), Gaps = 9/160 (5%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I Q+         A++++ +  K  P ++     G       I+ +++  N  
Sbjct: 398 RGIEVGNIFQLGTKYSESLEAYFLDENG-KQKPFIMGSYGIGITRSISAIIEQHYDENGI 456

Query: 548 LWLSPIQA------IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W + +        +V        E A++I N L    + +  D R E    K  +  + 
Sbjct: 457 IWPTKVAPFEAWITLVNKNNEEQKEIAEKIYNKLLDAGIEVMLDDRKERAGVKFNDRDLV 516

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            +P  I  G K+A +  +   +       K+   +AI  +
Sbjct: 517 GVPYRITVG-KDAKDDMVEFSKRSDMENLKMPTDEAIEKI 555


>gi|311064741|ref|YP_003971466.1| prolyl-tRNA synthetase ProS [Bifidobacterium bifidum PRL2010]
 gi|310867060|gb|ADP36429.1| ProS Prolyl-tRNA synthetase [Bifidobacterium bifidum PRL2010]
          Length = 616

 Score =  132 bits (333), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 39/186 (20%), Positives = 77/186 (41%), Gaps = 8/186 (4%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
           ++ +   G+  W   G K+   + + +R +I     +E++ P +L +  ++ +  W+ Y 
Sbjct: 46  YVRKAAPGIWTWLPLGLKVLNKIEAIVREEIDGIGAQEVHFPALLPREPYEATHRWEEYG 105

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            N+F +K      +    + L P +      +      SY++LPV L +  + YR+E   
Sbjct: 106 ENLFRLKD-----RHEADYLLAPTHEEMFTLLVKDMYSSYKDLPVTLYQIQTKYRDEFRP 160

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQ-MFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              GL+R R F   DA+ F   E+ M             I++    + + V   + P   
Sbjct: 161 R-AGLIRGREFIMKDAYSFTIDEEGMKKAYYDERGAYERIFQRLDLKYVPVFAMSGPMGG 219

Query: 435 VGSDAL 440
             S+  
Sbjct: 220 SASEEF 225



 Score = 89.8 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 63/163 (38%), Gaps = 12/163 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN- 545
           R  + G + Q+        +   ++ + +    V +    +G  + R +  + E      
Sbjct: 448 RGVEIGQVFQLGLKYSKALDLKVLDQNGKT---VPVWMGCYGIGVSRVLACIAETHHDER 504

Query: 546 ---LPLWLSPIQAIVTTITSSAVEY--AQEIANLLKSHHLSIETDFRNE-TINYKIREHS 599
               P  ++P Q  V      A  +  A+++   L+   + +  D R + +   K ++  
Sbjct: 505 GLAWPAVIAPAQVHVVATGKDAAAFDAAEKLVAELEERGIEVIYDDRKKVSPGVKFKDAE 564

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +  +P+I + G    +  +I IR   S+ +  V + DA   L 
Sbjct: 565 LIGVPLIAVAGRDTVNNGTIEIRNRDSSDSVAVPVADAAQTLA 607


>gi|329947841|ref|ZP_08294773.1| proline--tRNA ligase [Actinomyces sp. oral taxon 170 str. F0386]
 gi|328523465|gb|EGF50563.1| proline--tRNA ligase [Actinomyces sp. oral taxon 170 str. F0386]
          Length = 619

 Score =  132 bits (333), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 39/212 (18%), Positives = 78/212 (36%), Gaps = 11/212 (5%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
           +        ++E   HR L R   +        GV  W   G +  + + + +R+ +   
Sbjct: 18  IRTLREDPADAEVASHRLLVRACYIR---RAAPGVYTWLPLGLRTLRKIEAIVRQGMDAM 74

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
             +E++ P +L    +Q +G W+ Y   +F +    D       + L P +         
Sbjct: 75  GGQEVHFPALLPSEPYQATGRWNDYGPTLFKLHDRKDG-----DYLLAPTHEEMFTLAVK 129

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
               SY++LP  + +  + YR+E      G++R R F   D++ F   +       + H 
Sbjct: 130 DLYSSYKDLPAIVYQIQTKYRDEARPR-AGIIRGREFVMKDSYSFDIDDAGLAAAYQAHR 188

Query: 410 -LIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
                I+   G + ++V           S+  
Sbjct: 189 DAYERIFARLGLDYVIVNAMAGAMGGSHSEEF 220



 Score = 82.9 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 26/152 (17%), Positives = 55/152 (36%), Gaps = 8/152 (5%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN--- 545
           R  + G I       S+     V   + K   V +     G   R +  + E    +   
Sbjct: 447 RGIEIGHIFELGRKYSQALGLTVLDENGKARVVTMGSYGIGVS-RVMAALAEANHDDKGL 505

Query: 546 -LPLWLSPIQAIVTTITSSAV--EYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIK 601
             P+ ++P    V          + A+++A+ L +  + +  D R + +   K  +  + 
Sbjct: 506 SWPVQIAPYHVQVLATGKDQAVFDVAEQVASALDADGVEVLYDDRRKVSAGVKFADAELL 565

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            +P  ++ G   A E ++ IR   +   + V 
Sbjct: 566 GLPYTLVVGRDLAKEGTVEIRDRRTGDRRSVP 597


>gi|54026044|ref|YP_120286.1| prolyl-tRNA synthetase [Nocardia farcinica IFM 10152]
 gi|81822939|sp|Q5YSB9|SYP_NOCFA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|54017552|dbj|BAD58922.1| putative prolyl-tRNA synthetase [Nocardia farcinica IFM 10152]
          Length = 585

 Score =  132 bits (333), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 40/203 (19%), Positives = 81/203 (39%), Gaps = 11/203 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +  +A    GV  W   G ++ + +   +R ++     +EI+ P 
Sbjct: 19  DAEVPSHKLLVRAGYVRRVA---PGVYSWLPLGLRVLRKVEDVVRAEMNAIGGQEISLPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++ +  W  Y  ++F +       +    + L P +             SY++L
Sbjct: 76  LLPRDPYETTNRWTEYGDSLFRLHD-----RKGADYLLGPTHEELFALTVKGEYNSYKDL 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKD 417
           PV L +  + YR+E      G++R R F   D++ F   E         H      I+  
Sbjct: 131 PVTLYQIQTKYRDEERPR-AGILRGREFVMKDSYSFDLDEDGLKASYNAHREAYQRIFDR 189

Query: 418 FGFEKIMVKLSTRPEKRVGSDAL 440
            G + ++V  ++       S+  
Sbjct: 190 LGVKYVIVAATSGAMGGSASEEF 212



 Score = 79.4 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 21/150 (14%), Positives = 59/150 (39%), Gaps = 10/150 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN----FK 543
           R  + G I Q+ +     F    +  + +    +M    +   + R + ++ E       
Sbjct: 423 RGIEIGHIFQLGYKYTDAFEVDVLGENGKPVRLIMGSYGI--GVSRMVAVIAEQQHDEKG 480

Query: 544 GNLPLWLSP--IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
              P  ++P  +  +V     +A   A+++   L +  L +  D R  +   K ++  + 
Sbjct: 481 LRWPAAVAPFDVHVVVANKDEAARTGAEQVVAGLDAQGLDVLFDDRTASPGVKFKDAELL 540

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQK 631
            +P +++ G +  ++ ++ +R   +   + 
Sbjct: 541 GMPWVVVIG-RGWADGTVELRNRFTGEAEN 569


>gi|291398822|ref|XP_002716008.1| PREDICTED: prolyl-tRNA synthetase (mitochondrial)(putative)
           [Oryctolagus cuniculus]
          Length = 478

 Score =  132 bits (333), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 70/447 (15%), Positives = 149/447 (33%), Gaps = 39/447 (8%)

Query: 191 TGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLA 250
           T   ++          +    S + +L        N +++    L           ++L 
Sbjct: 18  TACSRQLSGRTPCRSHHCGPGSGQRLLLSRIFQPQNLREDQALSLESRSGELTCKSQRLM 77

Query: 251 REMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSG 309
            ++ L  I     G         +  + L+  + ++++    ++++ P +    LW+ + 
Sbjct: 78  LQVGL--ILPASPGCYHLLPYTVRALEKLVRLIDQEMQAVGGQKVSLPSLSPAELWRATQ 135

Query: 310 HWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSV 368
            WD     +  ++      +  + + L P +     A+       SY++LP  L +    
Sbjct: 136 RWDLMGKELLRLQD-----RHGKEYCLGPTHEEVVTALVASQKNLSYKQLPFLLYQVTRK 190

Query: 369 YRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKDFGFEKIMVKL 427
           +R+EP     GL+R R F   D + F  + E        + +   S++   G + I  + 
Sbjct: 191 FRDEPRPRF-GLLRGREFYMKDMYTFDSSPEAARQTYGLVCDAYCSLFSRLGLQVIKAQA 249

Query: 428 STRPEKRVGSDALW---DDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
                    S       +  E+ +  V  +   S+         L       P  +  L 
Sbjct: 250 DVGSIGGTMSHEFQLPVEVGEDQL-AVCPSCGFSAN-----VETLDSSQTNCPVCQGPLT 303

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG-SIERFIGIMIENFK 543
           +  G +    T  +     S F A + N+  +   P +     +G  + R +   IE   
Sbjct: 304 ETRGIEV-GHTFYLGTKYSSIFRAQFTNAEGK---PCLAEMGCYGLGVSRILAAAIEVLA 359

Query: 544 G----NLPLWLSPIQAIVTTITSSAVEYAQ-EIANLLKS---------HHLSIETDFRNE 589
                  P  L+P Q  +      + E A  E+   L           H   +  D  + 
Sbjct: 360 TEDSVRWPGLLAPYQVCLIPPKKGSKEAAATELTERLYDHIAEAVPQLHGELVLDDRTHL 419

Query: 590 TINYKIREHSIKKIPIIIICGDKEASE 616
           TI  ++++      P +++ G +   E
Sbjct: 420 TIGSRLKDADKLGYPFVVVAGKRALEE 446


>gi|257784517|ref|YP_003179734.1| prolyl-tRNA synthetase [Atopobium parvulum DSM 20469]
 gi|257473024|gb|ACV51143.1| prolyl-tRNA synthetase [Atopobium parvulum DSM 20469]
          Length = 565

 Score =  132 bits (333), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 44/163 (26%), Positives = 70/163 (42%), Gaps = 10/163 (6%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
            HR L R   +   A    G+  +    W+    + + +R ++     +EI  P +    
Sbjct: 20  SHRLLLRAGMIRKTAA---GLYSYLPLAWRSLLKIEAIIRDEMDGIGAQEILVPIMTPAE 76

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SG WD Y   +  +    D     R FAL P +      +  + LKSY++LPV L 
Sbjct: 77  LWEESGRWDVYGDELMRMHDRHD-----RQFALGPTHEETFTDLIRNELKSYKQLPVTLY 131

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           +    +R+E      GLMR R F   D + F   ++   EC  
Sbjct: 132 QIQDKFRDERRPRF-GLMRGREFIMKDGYSFSANQESLQECYD 173



 Score = 92.2 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 45/264 (17%), Positives = 92/264 (34%), Gaps = 17/264 (6%)

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKL-STRPEKRVGSDALWDDAENIMKGV------ 451
           +  +   + H +      +FG  K  +         RV  D   +D +  + G       
Sbjct: 300 KAEHAFGEYHMMTDEELDEFGLIKGFIGPVGLPEGIRVVGDLSLEDTQWWLCGANKADYH 359

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFY 510
           LD ++      IN    L          E  L     R  + G + Q+     S  NA +
Sbjct: 360 LDHVELGRDFEINEWKDLVTSQEGDICPECGLPLHAARGIEVGQVFQLGTKYSSALNATF 419

Query: 511 VNSHSEKCHPVMIHRAVFGSIERFIGIMIENF----KGNLPLWLSPIQAIVTTIT---SS 563
            + + +   P+++     G   R +  ++E +        P+ ++P +  V  ++     
Sbjct: 420 TDENGQDK-PLVMGCYGIGVS-RLLAAVVEQYNDEKGIKWPVSVAPYEVSVLCLSNKDPE 477

Query: 564 AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRR 623
             + A  +A+   +  L    D R E    K  +  +   P  +I G K  +     ++ 
Sbjct: 478 IWDAAGAVADACVAAGLETVVDDRVERPGVKFADADLIGFPWQVIVGKKGVTNGIAEVKE 537

Query: 624 FGSTTTQKVSLLDAIPILTKESLP 647
             +    +V+L +    L ++ LP
Sbjct: 538 RATGERFEVALDEVASWLAEKILP 561


>gi|212692837|ref|ZP_03300965.1| hypothetical protein BACDOR_02336 [Bacteroides dorei DSM 17855]
 gi|212664626|gb|EEB25198.1| hypothetical protein BACDOR_02336 [Bacteroides dorei DSM 17855]
          Length = 554

 Score =  132 bits (333), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 47/227 (20%), Positives = 95/227 (41%), Gaps = 2/227 (0%)

Query: 15  KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVI 73
           KNFP+ ++  D+    +  +    V+  +N KV  L+        +E +   +P  +   
Sbjct: 13  KNFPIGSSLLDIYNGFNLDIPYGPVSAKVNNKVEGLNYRAYNNKDVEFLNMLNPSGMRTY 72

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
             S   I+ +AV+ ++P+ ++ +   +  G+Y D         D++++I+++M+EI+  +
Sbjct: 73  VRSLCFILCKAVEDLYPDGKIMLEHPVSKGYYCDLQIGHETGLDDVSRIKQRMKEIVEAN 132

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQ 193
            PF +      K  ELF  K    KV++LE+   +     Y      D   G  + STG 
Sbjct: 133 IPFHRFECHTTKVVELFCRKGMMDKVKLLET-SGELYSYYYTLENTIDYYYGSLLPSTGY 191

Query: 194 VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           ++KF  +    G   R  + +               E+ +      +
Sbjct: 192 IRKFDIVKYYDGLLLRVPNRQNPEVLEEVVKQEKMLEVFKEHRRWNQ 238


>gi|118474251|ref|YP_891864.1| prolyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40]
 gi|152016592|sp|A0RNT1|SYP_CAMFF RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|118413477|gb|ABK81897.1| prolyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40]
          Length = 567

 Score =  132 bits (333), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 47/241 (19%), Positives = 91/241 (37%), Gaps = 11/241 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            T+  +       +++    H+ L R   +  I   GSG+  +   G ++ + + + +R 
Sbjct: 3   FTKLYVPTTKEAPKDATLPSHQFLIRAGFVAQI---GSGLYNFLPLGKRVLRKVENIVRD 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+    V+   LW+QS  +  +   +  +K   D       F L P +    
Sbjct: 60  EMDKAGANEVALSFVVPGELWKQSRRYFKFGKELLRLKDRKDN-----DFLLAPTHEESI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           V +    + SY++LP+ L + G  +R+E      GL+R R F   D + F   E      
Sbjct: 115 VDLVRDKVTSYKQLPLHLYQIGLKFRDEARPRF-GLLRCREFIMKDGYSFHASEADLKRE 173

Query: 405 LKIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             +       I+   G     V+  +      GS      A+N    +L +  ++    I
Sbjct: 174 FDLMETTYTKIFSRLGLNFRAVEADSGAIGGSGSKEFMVLAKNGEDDILISDASNYAANI 233

Query: 464 N 464
            
Sbjct: 234 E 234



 Score = 82.1 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 65/185 (35%), Gaps = 15/185 (8%)

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
            V  G+ A  G          +G        Q+         A +++ +  K  P  +  
Sbjct: 389 EVKAGDKALDGGVLSVTKGIEVGH-----IFQLGVRYSETMGATFLDENG-KSKPFFMGC 442

Query: 526 AVFGSIERFIGIMIE-NFKGNLPLW---LSPIQAIVTTIT---SSAVEYAQEIANLLKSH 578
              G   R + +M+E +      +W    +P    +       +  +++A  + + L+S 
Sbjct: 443 YGIGVS-RLVAVMVEASHDEKGCIWKKECAPFMVHIIVSNIKDTEQMQFALNLESNLESS 501

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
            + +  D RNE    K+ +  +  +P  ++ G K      +   +       KVS  + +
Sbjct: 502 GVEVLLDDRNERFGVKMADFELIGVPFGVVVG-KGLQNAEVEFIKRDGLEKVKVSSDEIL 560

Query: 639 PILTK 643
             L +
Sbjct: 561 GKLKE 565


>gi|139439769|ref|ZP_01773160.1| Hypothetical protein COLAER_02191 [Collinsella aerofaciens ATCC
           25986]
 gi|133774919|gb|EBA38739.1| Hypothetical protein COLAER_02191 [Collinsella aerofaciens ATCC
           25986]
          Length = 573

 Score =  132 bits (333), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 45/194 (23%), Positives = 85/194 (43%), Gaps = 11/194 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++           ++E   HR L R   +    ++ +G+  +    W+  + + + +R +
Sbjct: 8   SKLYAPTLKEDPADAELASHRLLLRAGMIR---KEAAGLYSYLPLAWRSIRKIENIVRDE 64

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E+  P ++D  LW++SG  D+Y   +          +  R F L P +     
Sbjct: 65  MDAAGAQELMMPIMVDAELWRESGRIDAYGKELVRFDD-----RHGREFVLGPTHEETVT 119

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNEC 404
           A+  + L+SY++LPV L      +R+E      GLMR R F   DA+ F  T+E +  E 
Sbjct: 120 ALVRNELRSYKQLPVNLYHIQDKFRDEFRPRF-GLMRGREFIMKDAYSFSATQESLQEEY 178

Query: 405 LKIHNLIISIYKDF 418
            K+     +I +  
Sbjct: 179 DKMKQAYANICERC 192



 Score =  103 bits (257), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 19/153 (12%), Positives = 61/153 (39%), Gaps = 7/153 (4%)

Query: 497 QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL---SPI 553
           Q+         A +++    K  P+++     G       ++ ++   +  +W    +P 
Sbjct: 415 QLGTKYSEAMGATFMDEDG-KEKPLIMGCYGVGVSRSLAAVVEQHNDEHGIVWPVSVAPY 473

Query: 554 QAIVTTITSSAVEYA---QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           +  V  +     E A   ++I + L +  + +  D R+E   +K  ++ +   P  ++ G
Sbjct: 474 EVAVIPLDPKKEECATVCEQIVDGLCAEGIEVVVDDRDERPGFKFADNDLMGFPYQVVLG 533

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +     ++ ++   +   + V++ + +  + +
Sbjct: 534 KRGLKNGTVELKDRATGEREDVAIDEVVAKVAE 566


>gi|115372906|ref|ZP_01460211.1| prolyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|115370173|gb|EAU69103.1| prolyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
          Length = 423

 Score =  132 bits (333), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 63/366 (17%), Positives = 133/366 (36%), Gaps = 58/366 (15%)

Query: 290 DYEEINTPQVLDQH-LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
            ++    P ++ +  L +++ H + +   +  V  A    K      ++P +       F
Sbjct: 6   GHKNAYFPLLIPESYLKKEAEHVEGFNPQLAVVTHAGG-AKLEEPLVIRPTSETIINRSF 64

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
              ++SYR+LP+ + ++ +V R E        +R   F   + H     E       K  
Sbjct: 65  AKWIQSYRDLPLLINQWANVMRWEMR--TRLFLRTTEFLWQEGHTCHETEADAE---KET 119

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
             ++ +Y+ F                         AE+ M   + T + S  +R      
Sbjct: 120 LQMLEVYRTF-------------------------AEDYMAMPVLTGRKSETERF----- 149

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAV 527
              GA      E +++D   +  Q GT   +  N    F+  +     ++ H   + +  
Sbjct: 150 --AGALRTYSIEAMMQD--KKALQAGTSHNLGQNFAKAFDTQFQGRDGKQHH---VWQTS 202

Query: 528 FGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI--------TSSAVEYAQEIANLL 575
           +G   R IG +I    ++    +P  L+P   ++  I         +  +E    +A  L
Sbjct: 203 WGVSTRLIGGLIMTHSDDAGLVVPPRLAPTHVVIIPILGKAADAEKTQVLEKVHAMAADL 262

Query: 576 KSHHLSIETDFRN-ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           +   L++  D  + ++  +K  EH +    + +  G K+ ++ S  + R      + V L
Sbjct: 263 RRAGLNVLVDDDDTKSPGFKYNEHEVVGTCLRVELGPKDLAKDSCVMVRRDVRQKEFVPL 322

Query: 635 LDAIPI 640
             A+  
Sbjct: 323 AQAVEK 328


>gi|224283879|ref|ZP_03647201.1| prolyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171]
 gi|310287860|ref|YP_003939118.1| prolyl-tRNA synthetase [Bifidobacterium bifidum S17]
 gi|309251796|gb|ADO53544.1| prolyl-tRNA synthetase [Bifidobacterium bifidum S17]
          Length = 599

 Score =  132 bits (332), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 39/186 (20%), Positives = 77/186 (41%), Gaps = 8/186 (4%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
           ++ +   G+  W   G K+   + + +R +I     +E++ P +L +  ++ +  W+ Y 
Sbjct: 29  YVRKAAPGIWTWLPLGLKVLNKIEAIVREEIDGIGAQEVHFPALLPREPYEATHRWEEYG 88

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            N+F +K      +    + L P +      +      SY++LPV L +  + YR+E   
Sbjct: 89  ENLFRLKD-----RHEADYLLAPTHEEMFTLLVKDMYSSYKDLPVTLYQIQTKYRDEFRP 143

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQ-MFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              GL+R R F   DA+ F   E+ M             I++    + + V   + P   
Sbjct: 144 R-AGLIRGREFIMKDAYSFTIDEEGMKKAYYDERGAYERIFQRLDLKYVPVFAMSGPMGG 202

Query: 435 VGSDAL 440
             S+  
Sbjct: 203 SASEEF 208



 Score = 89.5 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 63/163 (38%), Gaps = 12/163 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN- 545
           R  + G + Q+        +   ++ + +    V +    +G  + R +  + E      
Sbjct: 431 RGVEIGQVFQLGLKYSKALDLKVLDQNGKT---VPVWMGCYGIGVSRVLACIAETHHDER 487

Query: 546 ---LPLWLSPIQAIVTTITSSAVEY--AQEIANLLKSHHLSIETDFRNE-TINYKIREHS 599
               P  ++P Q  V      A  +  A+++   L+   + +  D R + +   K ++  
Sbjct: 488 GLAWPAVIAPAQVHVVATGKDAAAFDAAEKLVAELEERGIEVIYDDRKKVSPGVKFKDAE 547

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +  +P+I + G    +  +I IR   S+ +  V + DA   L 
Sbjct: 548 LIGVPLIAVAGRDTVNNGTIEIRNRDSSDSVAVPVADAAQTLA 590


>gi|330823518|ref|YP_004386821.1| Prolyl-tRNA synthetase [Alicycliphilus denitrificans K601]
 gi|329308890|gb|AEB83305.1| Prolyl-tRNA synthetase [Alicycliphilus denitrificans K601]
          Length = 581

 Score =  132 bits (332), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 38/199 (19%), Positives = 82/199 (41%), Gaps = 11/199 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       ++E   H+ + R   +  +   G+G+  +   G ++ + + + +R 
Sbjct: 3   ASQFFISTLKEAPADAEVVSHKLMMRAGLIKKL---GAGIYSYMPMGLRVIRKVEAIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E   P V    LWQ++G ++     +  ++      +  R F ++P +    
Sbjct: 60  EMNRAGAVECTMPVVQPAELWQETGRFEKMGPELLRIQD-----RHGRDFVIQPTSEEVV 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    L+SY++LP  L +  + +R+E      GLMR R F   DA+ F   +      
Sbjct: 115 TDIARQELRSYKQLPRNLYQIQTKFRDERRPRF-GLMRGREFIMKDAYSFDRDQAGAKAS 173

Query: 405 LK-IHNLIISIYKDFGFEK 422
            + +      I+  FG   
Sbjct: 174 YQAMAQAYRRIFDRFGLRY 192



 Score = 82.9 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 46/156 (29%), Gaps = 9/156 (5%)

Query: 497 QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN----LPLWLS 551
            V +       A       E   P       +G  I R     IE          P  ++
Sbjct: 422 HVFYLSTKYSKAMNATFLGEDGKPAFFEMGCYGIGITRLPAAAIEQNHDERGIIWPDAIA 481

Query: 552 PIQAIVTTITSSAVEYAQEIANLLK----SHHLSIETDFRNETINYKIREHSIKKIPIII 607
           P   ++  I     E  + +A  L     +  + +  D R E       +  +  +P  I
Sbjct: 482 PFTVVICPIGMDRSEEVRAVAEKLHGELLASGIDVILDDRGERPGAMFADWELIGVPHRI 541

Query: 608 ICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             GDK   E  +           KV + + +  + +
Sbjct: 542 TIGDKGLKEGQVEYLHRRDAGATKVGVAEILAHVKE 577


>gi|313141032|ref|ZP_07803225.1| prolyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171]
 gi|313133542|gb|EFR51159.1| prolyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171]
          Length = 596

 Score =  132 bits (332), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 39/186 (20%), Positives = 77/186 (41%), Gaps = 8/186 (4%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
           ++ +   G+  W   G K+   + + +R +I     +E++ P +L +  ++ +  W+ Y 
Sbjct: 26  YVRKAAPGIWTWLPLGLKVLNKIEAIVREEIDGIGAQEVHFPALLPREPYEATHRWEEYG 85

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            N+F +K      +    + L P +      +      SY++LPV L +  + YR+E   
Sbjct: 86  ENLFRLKD-----RHEADYLLAPTHEEMFTLLVKDMYSSYKDLPVTLYQIQTKYRDEFRP 140

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQ-MFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              GL+R R F   DA+ F   E+ M             I++    + + V   + P   
Sbjct: 141 R-AGLIRGREFIMKDAYSFTIDEEGMKKAYYDERGAYERIFQRLDLKYVPVFAMSGPMGG 199

Query: 435 VGSDAL 440
             S+  
Sbjct: 200 SASEEF 205



 Score = 89.5 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 63/163 (38%), Gaps = 12/163 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN- 545
           R  + G + Q+        +   ++ + +    V +    +G  + R +  + E      
Sbjct: 428 RGVEIGQVFQLGLKYSKALDLKVLDQNGKT---VPVWMGCYGIGVSRVLACIAETHHDER 484

Query: 546 ---LPLWLSPIQAIVTTITSSAVEY--AQEIANLLKSHHLSIETDFRNE-TINYKIREHS 599
               P  ++P Q  V      A  +  A+++   L+   + +  D R + +   K ++  
Sbjct: 485 GLAWPAVIAPAQVHVVATGKDAAAFDAAEKLVAELEERGIEVIYDDRKKVSPGVKFKDAE 544

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +  +P+I + G    +  +I IR   S+ +  V + DA   L 
Sbjct: 545 LIGVPLIAVAGRDTVNNGTIEIRNRDSSDSVAVPVADAAQTLA 587


>gi|319761647|ref|YP_004125584.1| prolyl-tRNA synthetase [Alicycliphilus denitrificans BC]
 gi|317116208|gb|ADU98696.1| prolyl-tRNA synthetase [Alicycliphilus denitrificans BC]
          Length = 581

 Score =  132 bits (332), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 38/199 (19%), Positives = 82/199 (41%), Gaps = 11/199 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       ++E   H+ + R   +  +   G+G+  +   G ++ + + + +R 
Sbjct: 3   ASQFFISTLKEAPADAEVVSHKLMMRAGLIKKL---GAGIYSYMPMGLRVIRKVEAIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E   P V    LWQ++G ++     +  ++      +  R F ++P +    
Sbjct: 60  EMNRAGAVECTMPVVQPAELWQETGRFEKMGPELLRIQD-----RHGRDFVIQPTSEEVV 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    L+SY++LP  L +  + +R+E      GLMR R F   DA+ F   +      
Sbjct: 115 TDIARQELRSYKQLPRNLYQIQTKFRDERRPRF-GLMRGREFIMKDAYSFDRDQAGAKAS 173

Query: 405 LK-IHNLIISIYKDFGFEK 422
            + +      I+  FG   
Sbjct: 174 YQAMAQAYRRIFDRFGLRY 192



 Score = 82.1 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 46/156 (29%), Gaps = 9/156 (5%)

Query: 497 QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN----LPLWLS 551
            V +       A       E   P       +G  I R     IE          P  ++
Sbjct: 422 HVFYLGTKYSKAMNATFLGEDGKPAFFEMGCYGIGITRLPAAAIEQNHDERGIIWPDAIA 481

Query: 552 PIQAIVTTITSSAVEYAQEIANLLK----SHHLSIETDFRNETINYKIREHSIKKIPIII 607
           P   ++  I     E  + +A  L     +  + +  D R E       +  +  +P  I
Sbjct: 482 PFTVVICPIGMDRSEEVRAVAEKLHGELLASGIDVILDDRGERPGAMFADWELIGVPHRI 541

Query: 608 ICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             GDK   E  +           KV + + +  + +
Sbjct: 542 TIGDKGLKEGQVEYLHRRDAGATKVGVAEILAHVKE 577


>gi|8671766|gb|AAF78372.1|AC069551_5 T10O22.10 [Arabidopsis thaliana]
          Length = 270

 Score =  132 bits (332), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 43/148 (29%), Positives = 73/148 (49%), Gaps = 9/148 (6%)

Query: 498 VDFNLPSRFNAFYVNSHSEK-CHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI 556
           VDF+L  RF   Y   +       V+IHRAV  S+ER   I++E +KG  P WLSP QAI
Sbjct: 122 VDFHLRDRFKLEYSAENETMIERSVLIHRAVLSSVERLFAILLEQYKGKFPFWLSPRQAI 181

Query: 557 VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASE 616
           V +++     YA ++ + +      ++ D  +  ++ K++E  +     I++ GD+EA  
Sbjct: 182 VCSVSEDYRSYADKVRDQIHEAGYYVDVDTTDRNVSDKVQEAQVAHYNYILVVGDEEART 241

Query: 617 RSIGIRRFGSTTTQKVSLLDAIPILTKE 644
             + +        + +S    I  L+ E
Sbjct: 242 GQVTVWLRD----EMMS----IETLSDE 261


>gi|305681315|ref|ZP_07404122.1| proline--tRNA ligase [Corynebacterium matruchotii ATCC 14266]
 gi|305659520|gb|EFM49020.1| proline--tRNA ligase [Corynebacterium matruchotii ATCC 14266]
          Length = 666

 Score =  132 bits (332), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 43/242 (17%), Positives = 86/242 (35%), Gaps = 11/242 (4%)

Query: 201 MKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAE 260
            ++ G      S   +L         +   L        ++E   H+ L R   +     
Sbjct: 62  QQITGIRSAPSSRGVLLVLPTMITRLSSLFLRTLREDPADAEVPSHKLLVRAGYIR---R 118

Query: 261 DGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMF 319
              GV  W   G +  + +   +R ++ +   +E+  P +L +  ++Q+  W  Y  N+F
Sbjct: 119 AAPGVYTWLPLGLRTLRKIEKVVREEMDNIGAQELLFPALLSREPYEQTRRWTEYGDNLF 178

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHG 379
            +K      +      L P +             SY++ PV L +  + YR+E      G
Sbjct: 179 RLKD-----RKGNDMLLGPTHEEMFARQVKDMFTSYKDFPVTLYQIQTKYRDEERPR-AG 232

Query: 380 LMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSD 438
           ++R R F   D++ F   +    +    H     +I+     E  + K ++       S+
Sbjct: 233 ILRGREFVMKDSYSFDMTDAGLEQSYLAHRAAYQAIFDRLNLEYAICKATSGAMGGSASE 292

Query: 439 AL 440
             
Sbjct: 293 EF 294



 Score = 87.1 bits (214), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 38/189 (20%), Positives = 75/189 (39%), Gaps = 12/189 (6%)

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPV 521
           I+  V + E     P  +      + R  + G I Q+       F+   ++ H ++  P 
Sbjct: 478 IDEYVEVAEIREGDPAPDGQGVLTLERGIEIGHIFQLGRKYTEVFDVQILDEHGKRTIPT 537

Query: 522 MIHRAVFGSIERFIGIMIE----NFKGNLPLWLSPIQAIVTTITSSAVEYA--QEIANLL 575
           M    +   I R +G++ E    +   N P+ ++P Q  V          A   +I   L
Sbjct: 538 MGSYGI--GISRLVGVIAEQHHDDNGLNWPVEVAPYQVHVVVANKDKAALAAGDDIVAQL 595

Query: 576 KSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
            +  + +  D R + +   K ++  +  +P I++ G +  S   + +R  G  T + V  
Sbjct: 596 DATGVEVLFDDRPKVSPGVKFKDSELLGMPYIVVLG-RSFSNGIVELRIRGGETLE-VPA 653

Query: 635 LDAIPILTK 643
            D +  +TK
Sbjct: 654 ADIVDTVTK 662


>gi|162289255|ref|YP_522539.2| prolyl-tRNA synthetase [Rhodoferax ferrireducens T118]
 gi|114152240|sp|Q21YZ5|SYP_RHOFD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
          Length = 580

 Score =  132 bits (332), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 48/257 (18%), Positives = 96/257 (37%), Gaps = 27/257 (10%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       ++E   H+ + R   +  +   G+G+      G ++ + +   +R 
Sbjct: 3   ASQFFISTLKEAPADAEVVSHKLMTRAGMIKKL---GAGIYSLMPMGLRVVRKVEQIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LWQ++G ++S    +  +K      +  R F ++P +    
Sbjct: 60  EMNRAGAVELVMPVVQPAELWQETGRFESNGPELLRIKD-----RHGRDFVVQPTSEEVV 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    +KSY++LP  L +  + +R+E      GLMR R F   DA+ F   +      
Sbjct: 115 TDIARQEIKSYKQLPKNLYQIQTKFRDERRPRF-GLMRGREFIMKDAYSFDRDQASAKAS 173

Query: 405 LKIH-NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            ++       I+  FG      +        +G D         +      I  + +D I
Sbjct: 174 YQVMAAAYRRIFDRFGLTY---RAVAADSGAIGGD---------LSEEFQVIAATGEDAI 221

Query: 464 NTGVLLGEGAFYGPKFE 480
                   G+ Y    E
Sbjct: 222 VY----CPGSDYAANME 234



 Score = 78.3 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 55/167 (32%), Gaps = 13/167 (7%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFK 543
           AI R  + G +  +        NA +++ + +   P  +    +G  I R     IE   
Sbjct: 412 AIERGIEIGHVFYLGTKYSQAMNATFLDVNGK---PQFMEMGCYGIGITRLPAAAIEQNH 468

Query: 544 GN----LPLWLSPIQAIVTTITSSAVEYAQ----EIANLLKSHHLSIETDFRNETINYKI 595
                  P  L+P   ++  I+       +    ++   L +  + +  D R E      
Sbjct: 469 DERGIIWPDALAPFTVVLCPISPERFPDVKAASDKLYAELLAAGVDVILDDRGERPGAMF 528

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +  +  +P  +  GD+      +  +    +    V +     +L 
Sbjct: 529 ADWELIGVPHRVTIGDRGLKAGEVEYQHRRDSAATTVGVTAIFSLLQ 575


>gi|89344805|gb|ABD69008.1| prolyl-tRNA synthetase [Rhodoferax ferrireducens T118]
          Length = 600

 Score =  132 bits (332), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 48/257 (18%), Positives = 96/257 (37%), Gaps = 27/257 (10%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       ++E   H+ + R   +  +   G+G+      G ++ + +   +R 
Sbjct: 23  ASQFFISTLKEAPADAEVVSHKLMTRAGMIKKL---GAGIYSLMPMGLRVVRKVEQIVRE 79

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LWQ++G ++S    +  +K      +  R F ++P +    
Sbjct: 80  EMNRAGAVELVMPVVQPAELWQETGRFESNGPELLRIKD-----RHGRDFVVQPTSEEVV 134

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    +KSY++LP  L +  + +R+E      GLMR R F   DA+ F   +      
Sbjct: 135 TDIARQEIKSYKQLPKNLYQIQTKFRDERRPRF-GLMRGREFIMKDAYSFDRDQASAKAS 193

Query: 405 LKIH-NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            ++       I+  FG      +        +G D         +      I  + +D I
Sbjct: 194 YQVMAAAYRRIFDRFGLTY---RAVAADSGAIGGD---------LSEEFQVIAATGEDAI 241

Query: 464 NTGVLLGEGAFYGPKFE 480
                   G+ Y    E
Sbjct: 242 VY----CPGSDYAANME 254



 Score = 78.3 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 55/167 (32%), Gaps = 13/167 (7%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFK 543
           AI R  + G +  +        NA +++ + +   P  +    +G  I R     IE   
Sbjct: 432 AIERGIEIGHVFYLGTKYSQAMNATFLDVNGK---PQFMEMGCYGIGITRLPAAAIEQNH 488

Query: 544 GN----LPLWLSPIQAIVTTITSSAVEYAQ----EIANLLKSHHLSIETDFRNETINYKI 595
                  P  L+P   ++  I+       +    ++   L +  + +  D R E      
Sbjct: 489 DERGIIWPDALAPFTVVLCPISPERFPDVKAASDKLYAELLAAGVDVILDDRGERPGAMF 548

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +  +  +P  +  GD+      +  +    +    V +     +L 
Sbjct: 549 ADWELIGVPHRVTIGDRGLKAGEVEYQHRRDSAATTVGVTAIFSLLQ 595


>gi|109005002|ref|XP_001114166.1| PREDICTED: probable prolyl-tRNA synthetase, mitochondrial-like
           [Macaca mulatta]
          Length = 475

 Score =  132 bits (332), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 65/378 (17%), Positives = 132/378 (34%), Gaps = 33/378 (8%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I     G         +  + L+  + ++++    +++N P +    LWQ +  WD    
Sbjct: 80  IYPASPGCYHLLPYTVRAMEKLVRVIDQEMQAIGGQKVNMPTLSPAELWQATNRWDLMGK 139

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHV-AVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            +  ++      +  + + L P +       +      SY++LP  L +    +R+EP  
Sbjct: 140 ELLRLRD-----RHGKEYCLGPTHEEAITALIAAQKKLSYKQLPFLLYQVTRKFRDEPRP 194

Query: 376 SLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              GL+R R F   D + F  + E        + +   S++   G   + V+        
Sbjct: 195 RF-GLLRGREFYMKDMYTFDSSPEAAQQTYNLVCDAYCSLFNRLGLRFVKVQADVGSIGG 253

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
             S        ++ +  L    + S       + L +     P  +  L +  G +    
Sbjct: 254 TMSHEF-QLPVDVGEDRLAICPHCSFSANLETLDLSQMN--CPACQSPLTETKGIE---- 306

Query: 495 TIQVDFNLPSRF-NAFYVNSHSEKCHPVMIHRAVFG-SIERFIGIMIENFKG----NLPL 548
            +   F L +++ + F     +    P +     +G  + R +   IE          P 
Sbjct: 307 -VGHTFYLGTKYSSIFNAQFTNIYGKPSLAEMGCYGLGVTRILAAAIEVLSTEDCVRWPS 365

Query: 549 WLSPIQAIVTTITSSA-VEYAQEIANLLKSH--------HLSIETDFRNE-TINYKIREH 598
            L+P QA +      +  E A E+   L  H        H  +  D R   TI  ++++ 
Sbjct: 366 LLAPYQACLIPPKKGSKEEAASELIGQLCDHITEAVPQLHGEVLLDDRTHLTIGNRLKDA 425

Query: 599 SIKKIPIIIICGDKEASE 616
           +    P +II G +   +
Sbjct: 426 NKFGYPFVIIAGKRALED 443


>gi|89098602|ref|ZP_01171484.1| prolyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
 gi|89086564|gb|EAR65683.1| prolyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
          Length = 568

 Score =  132 bits (332), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 45/216 (20%), Positives = 90/216 (41%), Gaps = 11/216 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +   +        ++E R H+ L R      I ++ +GV  +     K+ Q + + +R +
Sbjct: 4   SMTLIPTLREVPADAEVRSHQLLLRAG---FIRQNAAGVYSYLPMARKVLQKIEAIVREE 60

Query: 287 IK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P +    LWQ+SG W +Y   +  +K  +D     R FAL   +     
Sbjct: 61  MDDAGASELLMPALQQAELWQESGRWYTYGPELMRLKDRND-----REFALGATHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           ++    +KSY+ LP+ L +  + +R+E      G++R R F   DA+ F + ++  +E  
Sbjct: 116 SLVRDEVKSYKRLPLTLYQIQTKFRDEQRPRF-GILRGREFIMKDAYSFHSSQESLDEVY 174

Query: 406 -KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            ++     +I+   G     V   +       +   
Sbjct: 175 SRLFTAYSNIFTRCGLNFRAVIADSGAMGGKDTHEF 210



 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 25/152 (16%), Positives = 58/152 (38%), Gaps = 10/152 (6%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPI 553
           +        NA Y++ +  +  P+++     G   R +  + E +  +     P  L+P 
Sbjct: 413 LGTRYSEAMNAVYLDENG-RTQPMIMGCYGIGVS-RILAAIAEQYNDDKGFIWPADLAPF 470

Query: 554 QAIVTTITSSAVEYA---QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           +  V  +       A   +E+   L+ +   +  D R E    K  +  +  +P+ I  G
Sbjct: 471 KVHVIAVNMKDEAQAGLGEELYKELRGNGYEVLFDDRPERAGVKFADADLIGLPVRITAG 530

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            K ASE  + ++   +   +++     +  + 
Sbjct: 531 KK-ASEGIVEVKVRSTGEMEEIHKDQLLEHIA 561


>gi|284929738|ref|YP_003422260.1| prolyl-tRNA synthetase, family II [cyanobacterium UCYN-A]
 gi|284810182|gb|ADB95879.1| prolyl-tRNA synthetase, family II [cyanobacterium UCYN-A]
          Length = 606

 Score =  132 bits (332), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 49/243 (20%), Positives = 94/243 (38%), Gaps = 8/243 (3%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++           E+E   H+ L R   +  ++   SG+  +    W++ +     +R +
Sbjct: 4   SKVLFVTLREDPAEAEIISHKLLLRSCYIRRVS---SGIYSYLPLMWRVLRKTSQIIREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E   PQ+    LW++SG W +Y      +    D  +  R  AL P +     
Sbjct: 61  MNSIGGQECLLPQLQISDLWEESGRWKTYTEAEGIMFSLID--RQNRELALGPTHEEVVT 118

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT-KEQMFNEC 404
           ++    + SY+++P+ L +  + +R+E      GLMR R F   DA+ F    E +    
Sbjct: 119 SIVRDMVVSYKQMPLNLYQIQTKFRDEIRPRF-GLMRSREFIMKDAYSFDENLENLQKNY 177

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
             +     +I K  G    +V+  +     + S       +     +L T  NS    + 
Sbjct: 178 DMVSQAYCNILKRCGLSFKVVEADSGTIGGLASQEFMVLTDVGEDEILYTEDNSYAANVE 237

Query: 465 TGV 467
             V
Sbjct: 238 KAV 240



 Score = 82.5 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/192 (17%), Positives = 74/192 (38%), Gaps = 12/192 (6%)

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAI--GRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKC 518
           ++   V     A  G K     ++ +   +  + G + Q+      +  A + + + E+ 
Sbjct: 406 KLPELVFDVRRAKEGDKISENSQERLISKKGVEVGHVFQLGTKYSKKMKATFTDKNGEEK 465

Query: 519 HPVMIHRAVFGSIERFIGIMIENFKGNLPLWL---SPIQAIVTTITSS---AVEYAQEIA 572
            P+++     G        + +N   +  +W    +P  AI+          +E A++I 
Sbjct: 466 -PIVMGCYGIGVSRLVQSAVEQNHDKHGIIWPLAIAPYHAIIIVPNVKEKQQMEIAEKIY 524

Query: 573 NLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
             L S  +    D R E I  K ++  +  IP  I+ G +      + +    +  +Q+V
Sbjct: 525 YDLNSIGIETILDDRTERIGSKFKDAELIGIPYQIVTG-RTLKFGKVEVVDRKTKNSQEV 583

Query: 633 SLLDAIPILTKE 644
            + + +P L  E
Sbjct: 584 IIEE-LPKLFHE 594


>gi|221124302|ref|XP_002161215.1| PREDICTED: hypothetical protein [Hydra magnipapillata]
          Length = 587

 Score =  132 bits (332), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 35/168 (20%), Positives = 72/168 (42%), Gaps = 8/168 (4%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
            I + G+G+  +   G ++ + + + +R ++      E+  P +    LWQ++G +D   
Sbjct: 5   MIKKLGAGIYNYMPMGLRVIRKVEAIVREEMNRAGAVELTMPVIQPAELWQETGRFDKMG 64

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
             +  +K      +  R + ++P +      +    +KSY++LP  L +  + +R+E   
Sbjct: 65  PELLRIKD-----RHERDYVVQPTSEEVVTDIARQEIKSYKQLPKNLYQIQTKFRDERRP 119

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH-NLIISIYKDFGFEK 422
              GLMR R F   DA+ F   +       ++       I+  FG   
Sbjct: 120 RF-GLMRGREFIMKDAYSFDRDQDSAKASYQVMAKAYRRIFDRFGLTY 166



 Score = 81.4 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 59/166 (35%), Gaps = 13/166 (7%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NF 542
           AI R  + G +  +        NA +++ + +   P  +    +G  I R     IE N 
Sbjct: 386 AIERGIEVGHVFYLGTKYSKAMNATFLDVNGK---PQFMEMGCYGIGITRLPAAAIEQNH 442

Query: 543 KGNLPLW---LSPIQAIVTTITSS----AVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
                +W   L+P   ++  I           A ++   L S  + +  D RNE      
Sbjct: 443 DDKGIIWPDALAPFTVVLCPINPDRFPDVKAAADKLYEELLSAGVDVILDDRNERPGAMF 502

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            +  +  +P  +  GD+   E  +  +    +    V + +   +L
Sbjct: 503 ADWELIGVPHRVNIGDRGLKEGVVEYQHRRESAATSVPVAEIASLL 548


>gi|19553198|ref|NP_601200.1| prolyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|62390834|ref|YP_226236.1| prolyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|81847611|sp|Q8NP31|SYP_CORGL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|21324764|dbj|BAB99387.1| Prolyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|41326172|emb|CAF20335.1| PROBABLE PROLYL-TRNA SYNTHETASE PROTEIN [Corynebacterium glutamicum
           ATCC 13032]
          Length = 588

 Score =  132 bits (332), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 41/209 (19%), Positives = 83/209 (39%), Gaps = 11/209 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +  +A    G+  W   G +  + + + +R ++     +E+  P 
Sbjct: 19  DAEVPSHKLLVRAGYIRRVA---PGIYSWLPLGLRAVRNIEAVVREEMDAIGGQELLFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++ +  W  Y  ++F +K      +    + L P +     A       SY++ 
Sbjct: 76  LLPREPYETTQRWTEYGDSLFRLKD-----RKGADYLLGPTHEEMFAATVKDLYNSYKDF 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKD 417
           PV L +  + YR+E       L R R F   D++ F   +   +E    H      I+  
Sbjct: 131 PVTLYQIQTKYRDEERPRAGVL-RGREFVMKDSYSFDISDAGLDESYAKHRAAYQRIFDR 189

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
            G E  + + ++       S+     +EN
Sbjct: 190 LGLEYAICQATSGAMGGSASEEFLAVSEN 218



 Score = 84.1 bits (206), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 67/163 (41%), Gaps = 12/163 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I Q+       F+   ++ + ++  P M    +   + R + ++ E    +  
Sbjct: 423 RGIEIGHIFQLGRKYTEAFDVQILDENGKRAIPTMGSYGL--GVTRLLAVLAEQRHDDAG 480

Query: 548 L-W---LSPIQAIVTTITSSA--VEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSI 600
           L W   ++P Q  V      A  +E A+  A  L +  L +  D R + +   K ++  +
Sbjct: 481 LNWSVEVAPYQVHVVAANKDAAAIEAAERFAAELSAAGLDVLFDDRPKVSPGVKFKDAEL 540

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             +P  +I G +  +E  + +R  G   ++ +    A+  + +
Sbjct: 541 LGMPFALILG-RGYAEGKVELRVRGGEKSE-LDADQAVAQIVE 581


>gi|157414824|ref|YP_001482080.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81116]
 gi|172047085|sp|A8FKW6|SYP_CAMJ8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|157385788|gb|ABV52103.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81116]
          Length = 568

 Score =  132 bits (332), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 45/229 (19%), Positives = 92/229 (40%), Gaps = 11/229 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            T+          +++    H  L R      I + GSG+  +   G ++   + + ++ 
Sbjct: 3   FTKFYAPSLKEAPKDASLPSHIFLTRAG---FIEQIGSGLYNFLPLGKRVLDKIKNIVKE 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +E+N   +    LWQ+SG ++ +   +   K   +       F L P +    
Sbjct: 60  EMDKAGAQEVNLSFITPASLWQESGRYNVFGKELLRFKDRKEN-----EFVLGPTHEEAM 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF-NE 403
           +++  + + SY++LP+ L + G  +R+E      GL+R R F   D + F   E+    E
Sbjct: 115 LSLVKNKITSYKQLPLHLYQIGLKFRDEARPRF-GLLRCREFLMKDGYSFHANEEDLGCE 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
              ++     I +  G +   V+  +      GS      A+N    +L
Sbjct: 174 FELMYKTYSQILQRMGLDFRAVEADSGAIGGSGSKEFMVLAKNGEDDIL 222



 Score = 81.8 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 30/165 (18%), Positives = 59/165 (35%), Gaps = 9/165 (5%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNLP 547
           +  + G I       S+         + K  P  +     G   R + + IE +      
Sbjct: 406 KGIEVGHIFKLGQKYSKAMNANFLDENGKSQPFYMGCYGIGVS-RLLAVAIEASHDEKGC 464

Query: 548 LW---LSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W   L+P    +         A+E+A ++   L +  L +  D RNE    K+ +  + 
Sbjct: 465 IWNKTLAPFVLEIIVSNLKDEKALEFANKLYEDLTNLGLEVLLDDRNERFGVKMNDFELM 524

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
             P  ++ G K      I + +      + +   + + IL K+ L
Sbjct: 525 GFPYALVIG-KGLENNEIELIQREGLVKELIKTDELMEILKKKVL 568


>gi|254373305|ref|ZP_04988793.1| prolyl-tRNA synthetase [Francisella tularensis subsp. novicida
           GA99-3549]
 gi|151571031|gb|EDN36685.1| prolyl-tRNA synthetase [Francisella novicida GA99-3549]
          Length = 565

 Score =  132 bits (332), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 50/257 (19%), Positives = 93/257 (36%), Gaps = 27/257 (10%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            TQ  +       +E+    H+ + +   +  +A   SG+  W   G K+ Q + + +R 
Sbjct: 3   ATQTLIATTKELPKEAVLISHQYMLKAGLIKKLA---SGIYTWMPLGVKVLQKIQNIVRD 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P +L   L Q++  WD +   +  +       +  R F   P +    
Sbjct: 60  EMNKAGASELLLPSILPSELLQETHRWDKFGPELLKLHD-----RHNRDFCYGPTHEEPI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           V +    +KSY++LP+ L +  + +R+E      G+MR R F   DA+ F    Q     
Sbjct: 115 VDMARDTIKSYKQLPLNLYQIQTKFRDEIRPRF-GVMRAREFIMKDAYSFHENSQCLRNT 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++    +I    G     VK  T       S         ++    + I        
Sbjct: 174 YNTMYATYCNILDKIGLAYRPVKADTGAIGGDNSHEF-----QVLANAGEDI-------- 220

Query: 464 NTGVLLGEGAFYGPKFE 480
              +    G+ Y    E
Sbjct: 221 ---ICYSNGSDYAANIE 234



 Score = 84.8 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 24/152 (15%), Positives = 56/152 (36%), Gaps = 8/152 (5%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL---SPIQ 554
           ++       NA  +     K  P+++    FG        + ++   N  +W    +P Q
Sbjct: 415 LEDVYSKPMNANIIGQDG-KSKPMLMGCYGFGVSRVMAAAIEQSHDENGIIWPESIAPYQ 473

Query: 555 AIVTTITSSAVEYAQEIANLLKSH----HLSIETDFRNETINYKIREHSIKKIPIIIICG 610
             +  I  +  +  +E+A+ L        + +  D R         +  +      ++ G
Sbjct: 474 VAILPINYNKSDKVKEVADKLYQDLLGDGIDVLLDDRGARPGVMFADADLIGYSHHVVIG 533

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           D+   +  I  +   +   Q++++ + I ILT
Sbjct: 534 DRLLEQGLIEYKNRKTQEKQEITIAELIKILT 565


>gi|24215989|ref|NP_713470.1| prolyl-tRNA synthetase [Leptospira interrogans serovar Lai str.
           56601]
 gi|81846319|sp|Q8F148|SYP_LEPIN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|24197213|gb|AAN50488.1|AE011490_3 prolyl-tRNA synthetase [Leptospira interrogans serovar Lai str.
           56601]
          Length = 576

 Score =  132 bits (332), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 43/217 (19%), Positives = 88/217 (40%), Gaps = 11/217 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  L        ++    HR + R   +    +  +G+ F+   G K+ + +   +R 
Sbjct: 3   ASKYILPTEKENPADAVVASHRLMIRAGLVR---KSSAGLYFYLPLGLKVLKKIEQIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E + P +     W+QSG W +    MF ++   D       +AL P +    
Sbjct: 60  EMNSTGALEFDLPILTPSDFWEQSGRWSAMGKEMFRIQDRHDLS-----YALGPTHEESF 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    LKSY++LPV + +  + +R+E      G++R R F   DA+ F   +   ++ 
Sbjct: 115 SFLLKPLLKSYKDLPVNVYQIQTKFRDEIRPRF-GVIRSREFIMKDAYSFHIDDSSLDDT 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            + +      I+   G + I V+  +       S+  
Sbjct: 174 YQAMRVAYRKIFDRCGLKTIPVQADSGSMGGSASEEF 210



 Score = 68.7 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 67/184 (36%), Gaps = 14/184 (7%)

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
            P   + LK   G +      ++       F    ++ + +     M    +   + R +
Sbjct: 393 CPNCSFPLKAEKGIEV-GHIFKLGDKYTKAFGIQVLDQNGKSKTLTMGCYGI--GVNRTM 449

Query: 536 GIMIENFKGN----LPLWLSPIQAIVTTITSSAVEY--AQEIANLLKSHHLSIETDFRNE 589
             +IE          P+ ++P +  + +I     +Y   +E  N+L +  + +  D R+ 
Sbjct: 450 ATVIEQCNDEKGIFWPISIAPFEVSLVSIVKGEDQYFKIEEFYNVLMNEGIEVFWDDRDL 509

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGI--RRFGSTTTQKVS-LLDAIPILTKESL 646
              +K+++  +   PI I  G K      I I  R+     +   S   D +  +  ES+
Sbjct: 510 GPGFKLKDSELIGFPIRITIGKKFFESGEISIYNRKKDQEDSFVFSGFDDLVARV--ESM 567

Query: 647 PPDC 650
             + 
Sbjct: 568 RQEL 571


>gi|194477323|ref|YP_002049502.1| prolyl-tRNA synthetase [Paulinella chromatophora]
 gi|171192330|gb|ACB43292.1| prolyl-tRNA synthetase [Paulinella chromatophora]
          Length = 604

 Score =  132 bits (332), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 53/237 (22%), Positives = 94/237 (39%), Gaps = 8/237 (3%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+E   H+ L R   +  +     G+  +    W++ + + S +R ++      E+  PQ
Sbjct: 17  EAEVISHKLLLRAGYIRRV---TIGIYAYLPLLWRVLKKISSCVREEMTSAGAIELLMPQ 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    +WQ S  W  Y      +    D  +  R  AL P +      + ++ +KSYR+L
Sbjct: 74  LQPADIWQLSKRWAGYTQGEGIMFNLKD--RQGRELALGPTHEEVVTNLVDNLIKSYRQL 131

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL-IISIYKD 417
           P  L +  + +R+E      GLMR R F   DA+ F + E          +L   +I++ 
Sbjct: 132 PCTLYQIQTKFRDEIRPRF-GLMRSREFVMKDAYSFHSSEIDLKVSYDRMDLGYRNIFRR 190

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            G   + V+  +       S      AE     +L +   S        + L + AF
Sbjct: 191 CGLNVVAVEADSGSIGGAASQEFMVTAEAGEDLILISEDKSYAANQERAISLPKIAF 247



 Score = 59.0 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 21/134 (15%), Positives = 52/134 (38%), Gaps = 9/134 (6%)

Query: 508 AFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN----LPLWLSPIQAIVTTIT- 561
           A   N  +E  +        +G  I R     +E          PL ++P + I+  ++ 
Sbjct: 450 ALNANYTNEIGNQEPFWMGCYGIGISRLSQAAVEQHHDQKGICWPLSIAPFEVIIVIVSI 509

Query: 562 --SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSI 619
                    + + +++K+  + +  D R +    K ++  +  IP  I+ G + A    I
Sbjct: 510 QDEIQRTLGEALYSIMKAARVDVLIDDRQDRAGVKFKDADLIGIPWQIVIG-RGAINNQI 568

Query: 620 GIRRFGSTTTQKVS 633
            +    ++ ++++ 
Sbjct: 569 ELVERITSRSEQLD 582


>gi|240172755|ref|ZP_04751414.1| prolyl-tRNA synthetase [Mycobacterium kansasii ATCC 12478]
          Length = 582

 Score =  132 bits (332), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 50/359 (13%), Positives = 119/359 (33%), Gaps = 24/359 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +  IA    G+  W   G ++ + +   +R ++     +EI  P 
Sbjct: 19  DAEVPSHKLLIRAGYVRPIA---PGLYSWLPLGLRVLRNIERVVREEMNAIGGQEILFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++ +  W  Y  ++F ++      +    + L P +             SY++ 
Sbjct: 76  LLPRAPYETTNRWTEYGDSVFRLQD-----RRGNDYLLGPTHEELFTLTVKGEYNSYKDF 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKD 417
           P+ L +  + YR+E      G++RVR F   D++ F             H      I++ 
Sbjct: 131 PLVLYQIQNKYRDEARPR-AGILRVREFVMKDSYSFDIDSAGLKAAYHAHREAYQRIFER 189

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
                ++V   +       S+    ++       +   ++     +   +          
Sbjct: 190 LRVRYVIVSAVSGAMGGSASEEFLAESPVGEDTFVRCPESGYAANVEAVITARPE---TR 246

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
             +   +  +       TI       ++ +     + ++    V++     G     + I
Sbjct: 247 PIDGQPEAVVHDTGDTPTIATLVEWANQADLGRTVTAADTLKNVLVKVRQPGKDWELLAI 306

Query: 538 MI----ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIA-----NLLKSHHLSIETDFR 587
            +    E     L   L P +  +    +    Y   +        L ++++    D R
Sbjct: 307 GVPGDREVDDKRLSAALEPAEYALL-DDNDFARYPFLVKGYIGPKALHANNIRYLVDPR 364



 Score = 76.0 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 24/152 (15%), Positives = 56/152 (36%), Gaps = 10/152 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG--- 544
           R  + G I Q+       F+A  +    +     M    +   + R + ++ E       
Sbjct: 419 RGIEIGHIFQLGQKYTDAFSADVLGEDGKPVRLTMGSYGI--GVSRLVAVVAEQHHDELG 476

Query: 545 -NLPLWLSPIQAIVTTITSSAVEY--AQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
              P  ++P    +      A     A  +A  L    + +  D R  +   K ++  + 
Sbjct: 477 LRWPPAIAPFDVHLVIANKDAEARTGAVALATELNQQGVEVLLDDRQASPGVKFKDAELL 536

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            +P I++ G +  ++  + +R   S  T++++
Sbjct: 537 GMPWIVVVG-RGWADGVVELRDRFSGQTRELA 567


>gi|83770284|dbj|BAE60417.1| unnamed protein product [Aspergillus oryzae]
          Length = 620

 Score =  132 bits (332), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 82/462 (17%), Positives = 170/462 (36%), Gaps = 80/462 (17%)

Query: 220 IYGTAWNTQQELTQYLYF-LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQT 278
           + G   + +++   +    L + +  D+  ++    L     D +    +      I++ 
Sbjct: 88  LIGIDVSKEEDFPGWYQQVLTKGDMLDYYDVSGCFILKSFRADMTQPASYF-----IWEE 142

Query: 279 LISYMRRKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKD------ 330
           +  +   +IK    +  + P  + + +  ++  H + + A +  V  A D+ +       
Sbjct: 143 IQDWFNARIKKIGVKNCSFPLFVSEDVLNREKDHIEGFAAEVAWVTHAYDSSRPSYIGSS 202

Query: 331 --LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQ 388
              +  A++P +       ++  ++S+R+LP++L ++ SV R E        +R R F  
Sbjct: 203 PLEKKIAIRPTSETVMYPYYSKWIRSHRDLPLKLNQWNSVVRWEFKNP-QPFLRTREFLW 261

Query: 389 DDAHVFC-TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENI 447
            + H    TK+   +E + I +L   IY++     ++    T  EK  G           
Sbjct: 262 QEGHTAHLTKDGAHDEVMHILDLYAQIYEELLAVPVVKGQKTEKEKFAGG---------- 311

Query: 448 MKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRF 506
                                      Y    E  +  A GR  Q GT   +  N    F
Sbjct: 312 --------------------------LYTTTVEGYIP-ATGRGIQGGTSHGLGQNFSKMF 344

Query: 507 NAFYVNSH---SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTT 559
           N    +      EK  P+ + +  +G   R +G+M+     N  L L P     Q ++  
Sbjct: 345 NITVEDPSTKPDEKKPPLHVWQNSWGLSTRTLGVMVMIHSDNRGLVLPPRVADTQTVIVP 404

Query: 560 I------TSSAVE--YAQE--IANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIII 608
           +      +    E  YA+   + N+L    +   +D R   +  +K  +  ++ +P+ I 
Sbjct: 405 VGITAKTSDEEREKLYAEIDGLINILTGAGVRAISDKREGYSPGWKFNDWELRGVPLRIE 464

Query: 609 CGDKEASERSIGIRRF------GSTTTQKVSLLDAIPILTKE 644
            G  E+  + +   R       G ++ Q   L  A+P L ++
Sbjct: 465 FGPGESVGQFVTAARRDIPGKDGKSSIQISELSTAVPALLEQ 506


>gi|164687684|ref|ZP_02211712.1| hypothetical protein CLOBAR_01326 [Clostridium bartlettii DSM
           16795]
 gi|164603458|gb|EDQ96923.1| hypothetical protein CLOBAR_01326 [Clostridium bartlettii DSM
           16795]
          Length = 552

 Score =  132 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 48/258 (18%), Positives = 102/258 (39%), Gaps = 11/258 (4%)

Query: 11  DGSIKNFP-----VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITP 64
           DG  K +           SD+A+    + +       +N  V +L+  ++E S I+ +  
Sbjct: 7   DGCKKTYDLKNNTDGIRLSDIAKDFENNYSGYISLAVVNNDVQELNTYIKEDSDIKFLDT 66

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           ++P  L V   +   +   A + ++ + +V I   + +G Y +    +  + +++++I+ 
Sbjct: 67  KNPDGLRVYTRTLNLVFIMACKCLFKDSRVVIEHSLSNGVYCEIYLGRDITEEDISKIKD 126

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
           KM +IIA+D    K   + ++A E+F+S     K E++      + V +Y+   + D   
Sbjct: 127 KMDKIIAKDYDINKNIYTKKEAIEIFKSIGLDEKAELI-KYKENDIVKIYKCNNYIDHFY 185

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNT----QQELTQYLYFLEE 240
           G  + STG +K +       G      S                    +E  ++   +  
Sbjct: 186 GYLMPSTGYIKSYDLFKYRNGVILMAASEDDKHIPKKFVPQPKLANIYKEAEEWSNLMGV 245

Query: 241 SEKRDHRKLAREMDLFHI 258
            +     K+  E     I
Sbjct: 246 DKVLSLNKIIEEKKYGEI 263


>gi|62261354|gb|AAX77983.1| unknown protein [synthetic construct]
          Length = 600

 Score =  132 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 50/257 (19%), Positives = 93/257 (36%), Gaps = 27/257 (10%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            TQ  +       +E+    H+ + +   +  +A   SG+  W   G K+ Q + + +R 
Sbjct: 29  ATQTLIATTKELPKEAVLISHQYMLKAGLIKKLA---SGIYTWMPLGLKVLQKIQNIVRD 85

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P +L   L Q++  WD +   +  +       +  R F   P +    
Sbjct: 86  EMNKAGASELLLPSILPSELLQETHRWDKFGPELLKLHD-----RHNRDFCYGPTHEEPI 140

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           V +    +KSY++LP+ L +  + +R+E      G+MR R F   DA+ F    Q     
Sbjct: 141 VDMARDTIKSYKQLPLNLYQIQTKFRDEIRPRF-GVMRAREFIMKDAYSFHENSQCLRNT 199

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++    +I    G     VK  T       S         ++    + I        
Sbjct: 200 YNTMYATYCNILDKIGLAYRPVKADTGAIGGDNSHEF-----QVLANAGEDI-------- 246

Query: 464 NTGVLLGEGAFYGPKFE 480
              +    G+ Y    E
Sbjct: 247 ---ICYSNGSDYAANIE 260



 Score = 83.7 bits (205), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 25/159 (15%), Positives = 57/159 (35%), Gaps = 8/159 (5%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL---SPIQ 554
           ++       NA  +     K  P+++    FG        + ++   N  +W    +P Q
Sbjct: 441 LEDVYSKPMNANIIGQDG-KSKPMLMGCYGFGVSRVMAAAIEQSHDENGIIWPESIAPYQ 499

Query: 555 AIVTTITSSAVEYAQEIANLLKSH----HLSIETDFRNETINYKIREHSIKKIPIIIICG 610
             +  I  +  +  +E+A+ L        + +  D R         +  +      ++ G
Sbjct: 500 VAILPINYNKSDKIKEVADKLYQDLLGDGIDVLLDDRGARPGVMFADADLIGYSHHVVIG 559

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPD 649
           D+   +  I  +   +   Q++++ + I IL      PD
Sbjct: 560 DRLLEQGLIEYKNRKTQEKQEITIAELIKILKYPYDVPD 598


>gi|319649526|ref|ZP_08003682.1| prolyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
 gi|317398688|gb|EFV79370.1| prolyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
          Length = 567

 Score =  132 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 46/221 (20%), Positives = 93/221 (42%), Gaps = 11/221 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +   +        ++E R H+ L R      I ++ SG+  +     K+ Q + + +R +
Sbjct: 4   SMTLIPTLKEVPADAETRSHQLLLRAG---FIRQNASGIYSYMPLAKKVLQKVEAIIREE 60

Query: 287 I-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P +    LWQ+SG W +Y   +  +K      +  R FAL   +     
Sbjct: 61  MDNAGAVELLMPALQQAELWQESGRWYTYGPELMRMKD-----RHEREFALGATHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           ++    +KSY++LP+ L +  + +R+E      GL+R R F   DA+ F + ++  +E  
Sbjct: 116 SLVRDAVKSYKKLPLALYQIQTKFRDEKRPRF-GLLRGREFIMKDAYSFHSNQESLDEMY 174

Query: 406 -KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
            K+     ++++  G     V   +       +      +E
Sbjct: 175 DKLFTAYSNVFRRCGLNFRAVIADSGAMGGKDTHEFMVLSE 215



 Score = 72.1 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 35/230 (15%), Positives = 83/230 (36%), Gaps = 24/230 (10%)

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG-------------PKFEY 481
           +G   +   A++ ++ +++ +  ++++ I+      +  FY              P  + 
Sbjct: 336 IGVKDIEIIADHAVEAIVNGVCGANEEGIHYVNANPDRDFYVTRYADLRFIQEGDPSPDG 395

Query: 482 ILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
                  +  + G I  +         A +++ +  +  P+++     G   R +  + E
Sbjct: 396 QGTIQFAKGIEVGHIFKLGTRYSEAMEATFLDENG-RTQPMIMGCYGIGVS-RTMAAVAE 453

Query: 541 NFKGN----LPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
            F        P  L+P    +  I     +    A+E+  +LK     +  D R E    
Sbjct: 454 QFSDENGFIWPRSLAPFDLHLIPINMKDETQSAVAEELYTMLKRDRYDVLMDDRQERPGV 513

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           K  +  +  +PI I  G K ASE  + ++   +   Q++        + +
Sbjct: 514 KFADSDLIGLPIRITVGKK-ASEGIVEVKVRKTGEMQEIHKDQLADKIAE 562


>gi|71899288|ref|ZP_00681449.1| Proline--tRNA ligase [Xylella fastidiosa Ann-1]
 gi|71730914|gb|EAO32984.1| Proline--tRNA ligase [Xylella fastidiosa Ann-1]
          Length = 303

 Score =  132 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 43/220 (19%), Positives = 84/220 (38%), Gaps = 11/220 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  L        ++E   HR + R   +  +A   SG+  W   G ++ + + + +R +
Sbjct: 4   SEFHLHTTKEIPADAELVSHRLMLRAGMIRKLA---SGLYTWSPLGLRVLRKVEAIVRDE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P +  + LW++S  W+ + + +  +K      +    +   P       
Sbjct: 61  MNRAGAVEMLLPTIQPRELWEESERWEKFGSQLLKIKD-----RKQAEYCYSPTAEEAVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF-NEC 404
                 L SY++LPV L +  + +R+E      G+MR R F   DA+ F   +     E 
Sbjct: 116 DYVRQELTSYKQLPVNLYQIQTKFRDEIRPRF-GVMRAREFVMKDAYSFHLSDADLVREY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
             +      I+   G E   V+  +       S      A
Sbjct: 175 ENMRATYTRIFTRLGLEFRSVQADSGAIGGDASQEFHVIA 214


>gi|77026364|gb|ABA61842.1| hypothetical threonine tRNA synthetase [Pimelobacter simplex]
          Length = 256

 Score =  132 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 65/218 (29%), Positives = 106/218 (48%), Gaps = 36/218 (16%)

Query: 4   DIKLTF--PDGSIKN-FPVHATGSDVAESISRSLAKKAVAVAING------KVCDLSDPV 54
           DIK+    PD   +          ++            +AV ++        + DLS  +
Sbjct: 46  DIKVAVLSPDARQEETVTEGTKAWELFRE-----EADVIAVRVSAGSTSEPVLKDLSYAL 100

Query: 55  REGS-IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQP 113
            +G  +E +    P  L ++RHS AH++A+AVQ ++PE ++ IGP I+DGFYYDFD E P
Sbjct: 101 ADGDEVEGVLIGSPDGLDILRHSTAHVLAQAVQQVFPEAKLGIGPPIQDGFYYDFDVETP 160

Query: 114 FSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL----------- 162
           F  ++L ++E +M++II  +  F ++  + E A  L E   E YKVE++           
Sbjct: 161 FVPEDLVKLETRMRKIIKENQRFDRRVTTDEDA--LVELADEPYKVELIGLKGNAGEAAE 218

Query: 163 --------ESIPAKENVTLYRQGEWFDLCRGPHVRSTG 192
                     +   +N+    +  W DLCRGPH+ +T 
Sbjct: 219 GAAAEVGAGELTIYDNINRNGEVAWKDLCRGPHLPTTK 256


>gi|227874914|ref|ZP_03993066.1| proline--tRNA ligase [Mobiluncus mulieris ATCC 35243]
 gi|269976484|ref|ZP_06183469.1| prolyl-tRNA synthetase [Mobiluncus mulieris 28-1]
 gi|306818238|ref|ZP_07451968.1| proline--tRNA ligase [Mobiluncus mulieris ATCC 35239]
 gi|307701739|ref|ZP_07638753.1| proline--tRNA ligase [Mobiluncus mulieris FB024-16]
 gi|227844491|gb|EEJ54648.1| proline--tRNA ligase [Mobiluncus mulieris ATCC 35243]
 gi|269935285|gb|EEZ91834.1| prolyl-tRNA synthetase [Mobiluncus mulieris 28-1]
 gi|304648977|gb|EFM46272.1| proline--tRNA ligase [Mobiluncus mulieris ATCC 35239]
 gi|307612997|gb|EFN92252.1| proline--tRNA ligase [Mobiluncus mulieris FB024-16]
          Length = 633

 Score =  132 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 81/203 (39%), Gaps = 11/203 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E   H+ L R   +        G+  W   G ++ + + + +R ++     +E+  P 
Sbjct: 19  EAEVDSHKLLVRAGYIR---RAAPGIYTWLPLGLRVLRNIENVVREEMDRIGGQELQFPV 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++ +  W+ + +++F ++      +    + L P +      +      SY++L
Sbjct: 76  LLPREPYEATNRWEEFGSSLFKLQD-----RKGGDYLLGPTHEEMFTVIVKDLFSSYKDL 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKD 417
           P+ L +    YR+E      G++R R F   D + F   ++       ++      +Y  
Sbjct: 131 PILLYQIKEKYRDEARPR-AGVIRGREFVMKDLYSFDLTDEGLAHSYALNRGAYRRVYTR 189

Query: 418 FGFEKIMVKLSTRPEKRVGSDAL 440
            G E  + +  +       S+  
Sbjct: 190 LGLEFAICQAQSGAMGGSASEEF 212



 Score = 88.7 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 70/184 (38%), Gaps = 16/184 (8%)

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIH 524
            VL G+     P  +      + R  + G I  +            ++ + +     M  
Sbjct: 416 EVLPGD-----PAPDGSGPLTLARGIEIGHIFALGRKYAKALGLTVLDENGKAQVVTMGS 470

Query: 525 RAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTITSSAVEYA--QEIANLLKSH 578
             +   + R +  + EN   +     P+ ++P Q  V         +A  +++A  L++ 
Sbjct: 471 YGI--GVSRLVAAIAENTHDDKGLVWPVNVAPFQVHVLATGKDPQVFAAAEKLARELEAA 528

Query: 579 HLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
            + +  D R + +   K ++  +  +P +++ G K  +  ++ IR   +  T   ++  A
Sbjct: 529 GIPVLYDDRAKASAGVKFKDAELMGMPYLLVVG-KGLANGTVEIRDRRAGNTLDCTVEAA 587

Query: 638 IPIL 641
           +  L
Sbjct: 588 VEKL 591


>gi|116327681|ref|YP_797401.1| prolyl-tRNA synthetase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|122284523|sp|Q053M7|SYP_LEPBL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|116120425|gb|ABJ78468.1| Prolyl-tRNA ligase [Leptospira borgpetersenii serovar Hardjo-bovis
           L550]
          Length = 576

 Score =  132 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 46/217 (21%), Positives = 87/217 (40%), Gaps = 11/217 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  L        ++    HR + R        +  +G+ F+   G KI Q +   +R 
Sbjct: 3   ASKYILPTEKENPSDAVVASHRLMIRAGLAR---KSSAGLYFYLPLGLKILQKIKQIIRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E + P +     W+QSG W +    MF +K   D       +AL P +    
Sbjct: 60  EMNKTGALEFDLPILTPSDFWEQSGRWTAMGKEMFRIKDRHDLS-----YALGPTHEESF 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    LKSY++LP+ + +  + +R+E      G++R R F   DA+ F   +   +E 
Sbjct: 115 SFLLKPLLKSYKDLPLNVYQIQTKFRDEIRPRF-GVIRSREFIMKDAYSFHIDDVSLDET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            + +      I+   G + I V+  +       S+  
Sbjct: 174 YQSMRAAYRKIFDRCGLKTIPVQADSGSMGGSASEEF 210



 Score = 67.1 bits (162), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 69/182 (37%), Gaps = 10/182 (5%)

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
            P     LK   G +   G I       ++     V   + K   + +     G + R +
Sbjct: 393 CPNCNAPLKAEKGIE--VGHIFKLGEKYTKAFGIQVLDQNGKARTLTMGCYGIG-VNRTM 449

Query: 536 GIMIENFKGN----LPLWLSPIQAIVTTITSSAVEY--AQEIANLLKSHHLSIETDFRNE 589
             +IE          P+ ++P +  + +IT    +Y  A+E  N+LK+ +L +  D R+ 
Sbjct: 450 ATVIEQRNDEKGIFWPISIAPFEVTLVSITKGEEQYSKAEEFYNVLKNENLEVFWDDRDV 509

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK-ESLPP 648
              +K+++  +   PI +  G K      I I    +   +         ++ + ESL  
Sbjct: 510 GPGFKLKDSELIGFPIRVTIGKKFFENGEISIYNRKADKEESFVFAGFENLIARVESLRQ 569

Query: 649 DC 650
           + 
Sbjct: 570 EL 571


>gi|33519754|ref|NP_878586.1| prolyl-tRNA synthetase [Candidatus Blochmannia floridanus]
 gi|81836111|sp|Q7VRC8|SYP_BLOFL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|33504099|emb|CAD83360.1| prolyl-tRNA synthetase [Candidatus Blochmannia floridanus]
          Length = 581

 Score =  132 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 43/217 (19%), Positives = 87/217 (40%), Gaps = 11/217 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            TQ  L       +  E   H+ + R   +  I+   SGV  W   G ++ + + + +  
Sbjct: 3   TTQYLLATIKEIPKSCEPISHQLMLRSGMVRQIS---SGVYTWLPTGLRVLKKIENIIHE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++    + EI  P     +LW+QSG W  Y   +   K   +     + F L P +    
Sbjct: 60  EMNKIGFLEIFMPITQPANLWKQSGRWSEYGLELLRFKNRTN-----QKFVLGPTHEEMI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF-NE 403
             +  + + S+++ P++L +  + YR+E      G++R + F   D + F   ++   + 
Sbjct: 115 TDLVCNEILSHKQFPIKLYQINTKYRDEARPQF-GVIRSKEFIMKDGYSFHIHQKSLEDT 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
              I+     I+K  G +  +V+        + S   
Sbjct: 174 YYNIYQQYHIIFKRIGLKFCVVQADPGNIGGIVSHEF 210



 Score = 54.8 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/162 (15%), Positives = 55/162 (33%), Gaps = 10/162 (6%)

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL- 550
           + G I       S      +   ++    + +     G       ++ ++   +  +W  
Sbjct: 415 EIGHIFQLGKKYSNCINSCIQKKNKDNLNITMGCYGIGITRIVPMVIEQHHDKHGIIWPN 474

Query: 551 --SPIQAIVTTITS----SAVEYAQEIANLLKSH---HLSIETDFRNETINYKIREHSIK 601
             +P +  +  I      +    A+E+   L S       I  D R E       +  + 
Sbjct: 475 EIAPFKLAIIPINMYRFINVQNTAEELYTQLSSIPVIGFDILLDDRKENPGIMFTDIDLL 534

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            IP I+I  ++  + + +  +   +   QK+ L   I  LT+
Sbjct: 535 GIPHILIISERNLNNQEVEYKYRKTGIIQKIKLNLIIQFLTE 576


>gi|332798798|ref|YP_004460297.1| phosphoribulokinase/uridine kinase [Tepidanaerobacter sp. Re1]
 gi|332696533|gb|AEE90990.1| phosphoribulokinase/uridine kinase [Tepidanaerobacter sp. Re1]
          Length = 550

 Score =  132 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 44/215 (20%), Positives = 88/215 (40%), Gaps = 2/215 (0%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           + +T       +        ++AE    +     +A  ++G + +L+  + ++  +E I 
Sbjct: 1   MNITIKGFENISIDKAIKLVEIAEDYQHNFNSPIIAAIVDGNLRELTYVLDKDCEVEFID 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
                 + +   S   +  +A   I P  QV +   + DG Y +   E+P   +E+A +E
Sbjct: 61  MSTETGMKIYLRSLIFLFVKACHDIIPNCQVRVEHSLGDGLYSEVMAEEPIDEEEVAAVE 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M++++ +D P  K  +  E A ++FE      KV +L     +E + +Y      +  
Sbjct: 121 NRMRQLVEKDVPIKKNKIPIEDALDMFEKAGMQDKVRLL-KYRKEEYINIYELDGMKNYF 179

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLS 218
            G  V STG +K F     + G   +  S      
Sbjct: 180 YGYMVPSTGYLKWFKLKFYLPGIILQHPSKTNPTY 214


>gi|323356826|ref|YP_004223222.1| prolyl-tRNA synthetase [Microbacterium testaceum StLB037]
 gi|323273197|dbj|BAJ73342.1| prolyl-tRNA synthetase [Microbacterium testaceum StLB037]
          Length = 600

 Score =  132 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 42/216 (19%), Positives = 83/216 (38%), Gaps = 11/216 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +   L        ++E   HR L R   +     +  G+  W   G K+   + + +R +
Sbjct: 8   SNFFLRTLREDPSDAEVASHRLLVRAGYIR---RNAPGIFAWLPLGLKVKAKIETVVREE 64

Query: 287 I-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E++ P +L +  ++ +G W+ Y   +F ++      +    + L P +     
Sbjct: 65  MANAGAFEVHFPALLPREPYEVTGRWEEYGDALFRLQD-----RKGADYLLAPTHEEMFT 119

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +      SY++LP+ + +    YR+E      GL+R R FT  DA+ F   +   N   
Sbjct: 120 LLVKDLYSSYKDLPLTIYQIQDKYRDEARPR-AGLLRGREFTMKDAYSFDATDAGLNASY 178

Query: 406 KIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           +        I+   G E ++V           S+  
Sbjct: 179 QAQRDAYERIFTRLGLEYVIVAADAGAMGGSKSEEF 214



 Score = 81.8 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 67/163 (41%), Gaps = 11/163 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNL 546
           R  + G + Q+            ++ + +     M    +   + R + I+ E N     
Sbjct: 441 RGMEIGHVFQLGRKYAEALGLKVLDENGKLATVTMGSYGI--GVTRILAIIAELNNDEKG 498

Query: 547 PLWLSPI-----QAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSI 600
            +W + +       + T   ++A E A++++  L++  L +  D R + +   K  +  +
Sbjct: 499 LIWPASVAPFDVHVVATGRDAAAFELAEQVSADLEAAGLDVLYDDRPKVSPGVKFGDAEL 558

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             IP I+I G + A+E  + +    +   + + + DA+  L +
Sbjct: 559 VGIPRILIVG-RGAAEGQVELWDRRTGERETLPVADALAALAR 600


>gi|320104617|ref|YP_004180208.1| prolyl-tRNA synthetase [Isosphaera pallida ATCC 43644]
 gi|319751899|gb|ADV63659.1| prolyl-tRNA synthetase [Isosphaera pallida ATCC 43644]
          Length = 595

 Score =  132 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 42/217 (19%), Positives = 91/217 (41%), Gaps = 11/217 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  +         +    H+ L +   +  +   GSG   +   GW++   +++ +R+
Sbjct: 3   WSKALIPTLKEAPAGAVAPSHQLLLKAGMIRQL---GSGAYTYLPLGWRVLNKIVAIVRK 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
            +     +E+  P +    LW+++G + ++   +  +K   D     +T AL P +    
Sbjct: 60  GMDDAGAQEMLMPALQPVELWKETGRYQTFGDLLMQLKVGGD-----QTMALGPTHEEVV 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT-KEQMFNE 403
             +    +KSYR+LP+ L +  + +R+EP      L R R F   DA+ F    +Q+   
Sbjct: 115 TDLARDLIKSYRQLPMTLYQIQTKFRDEPRPRFGVL-RTREFLMKDAYSFDANLDQLNQS 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
              ++     I+ + G   ++V+  + P     S   
Sbjct: 174 YDAMYEAYQRIFDECGIPYVVVEAESGPIGGDSSHEF 210



 Score = 74.4 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 20/155 (12%), Positives = 57/155 (36%), Gaps = 10/155 (6%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN----FK 543
           R  + G +  +         A +++        +++     G I R +   +E       
Sbjct: 409 RGIEVGHVFKLGTKYSKAMGATFLDETGTAQD-IIMGCYGIG-INRILAAAVEALHDAHG 466

Query: 544 GNLPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              PL ++P + I+  +       +   + +   L +  + + TD R+    +K ++  +
Sbjct: 467 IVWPLAIAPYEVILIPLKVSNPDLMAVVETLERELAAAGIDVLTDDRDHQPGFKFKDADL 526

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
             IP+ ++ G++   E  + ++         + + 
Sbjct: 527 IGIPLRVVIGERGLKEGKLELKWRHEKEADSIPVE 561


>gi|320535781|ref|ZP_08035862.1| prolyl-tRNA synthetase [Treponema phagedenis F0421]
 gi|320147329|gb|EFW38864.1| prolyl-tRNA synthetase [Treponema phagedenis F0421]
          Length = 576

 Score =  132 bits (331), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 50/221 (22%), Positives = 91/221 (41%), Gaps = 11/221 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  +        E+    H+ L R   +  I   G+G+  +   G + F  + + +R +
Sbjct: 4   SQMFMPTLREVPSEAVIASHQLLLRAGMIRKI---GNGLFAYLPLGLRSFHKIENIIREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E     V+   LWQ+SG WD+    +  +K      +  +   + P       
Sbjct: 61  LDAIGCLECKPSVVIPGELWQESGRWDAMGDELLRMKN-----RLNQDLVVSPTAEEAFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           A+    L SY++ P+ L +  + YR+E     +GLMR R FT  DA+ F T ++  +E  
Sbjct: 116 ALLRFELSSYKQFPLTLYQINTKYRDEIRPR-YGLMRAREFTMMDAYSFHTTQESLDEVY 174

Query: 406 KIH-NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
           +        I+   G   I V+  +      GS+    ++E
Sbjct: 175 EHFSQAYRKIFARCGLSVIPVRADSGAMGGSGSEEFMVESE 215



 Score = 80.6 bits (197), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 26/157 (16%), Positives = 63/157 (40%), Gaps = 11/157 (7%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL---SPIQ 554
           + F      N  +++ + ++ +P M      G       ++ E+   +  +W    +P  
Sbjct: 420 LGFKYTKSMNMTFLDENGKQQYPTM-GCYGIGVDRTLASVIEEHHDEDGIVWPLTVAPYH 478

Query: 555 AIVTTITSS--AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
           A++  I       E A  +   L++  + +  D R+E    K ++  +  IPI ++ G+K
Sbjct: 479 AVIVPIKYEGKMKEAADALYTELQTAGVEVLLDDRHERPGVKFKDMDLIGIPIRLVVGEK 538

Query: 613 EASERSIGIRRFGSTTTQKVSLLD---AIPILTKESL 646
                 I  +      ++ ++  +    +  L +E+L
Sbjct: 539 NLP--QIECKLRTEKESKLIAQKEVCAFVQKLVQEAL 573


>gi|194207413|ref|XP_001492689.2| PREDICTED: prolyl-tRNA synthetase 2, mitochondrial (putative)
           [Equus caballus]
          Length = 472

 Score =  132 bits (331), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 68/388 (17%), Positives = 132/388 (34%), Gaps = 53/388 (13%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I     G         +  + L+  + ++++    ++++ P +    LW+ +  WD    
Sbjct: 77  IHPASPGCYHLLPYTVRALEKLVRVIDQEMRAIGGQKVSMPSLSPAELWRATNRWDLMGK 136

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL-KSYRELPVRLAEFGSVYRNEPSG 375
            +  ++      +  + + L P +     A+       SY++LP  L +    +R+EP  
Sbjct: 137 ELLRLRD-----RHGKEYCLGPTHEEAVTALVASQKTLSYKQLPFLLYQVTRKFRDEPRP 191

Query: 376 SLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKDFGFEKIM---------- 424
              GL+R R F   D + F  + E        + +   S++   G   +           
Sbjct: 192 RF-GLLRGREFYMKDMYTFDSSPEAARQTYGLVCDAYSSLFARLGLPCVKVQAGVGSIGG 250

Query: 425 -VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            +    +    VG D             ++T+  S  +               P  +  L
Sbjct: 251 TMSHEFQLPADVGEDQFAVCPSCSFSANVETLNLSQTN--------------CPACQGPL 296

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG-SIERFIGIMIENF 542
            +  G +    T  +     S FNA + N H +   P +     +G  + R +   IE  
Sbjct: 297 TETKGIEV-GHTFYLGTKYSSVFNAQFTNVHGK---PSLAEMGCYGLGVTRILAAAIEVL 352

Query: 543 KGNLPL-W---LSPIQAIVTTITSSA-VEYAQEIANLLKSH--------HLSIETDFRNE 589
                L W   L+P Q  +      +  E A E+A  L  H           +  D R  
Sbjct: 353 STEYCLRWPGLLAPYQVCLIPPKKGSKEEVATELAGHLYDHITEAVPQLRGEVLLDDRTH 412

Query: 590 -TINYKIREHSIKKIPIIIICGDKEASE 616
            TI  ++++ +    P +II G +    
Sbjct: 413 LTIGNRLKDANKFGYPFVIIAGKRALEA 440


>gi|289178315|gb|ADC85561.1| Prolyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           BB-12]
          Length = 615

 Score =  131 bits (330), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 38/186 (20%), Positives = 75/186 (40%), Gaps = 8/186 (4%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
           +I +   G+  W   G  +   +   +R +I     +E++ P +L +  ++ +  W+ Y 
Sbjct: 45  YIRKAAPGIWTWLPLGLAVLNKIEDVIREEINGIGAQEVHFPALLPREPYEATHRWEEYG 104

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            N+F +K      +    + L P +      +      SY++LPV L +  + YR+E   
Sbjct: 105 DNIFRLKD-----RHEADYLLAPTHEEMFTLLVKDMYSSYKDLPVTLYQIQTKYRDEFRP 159

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              GL+R R F   DA+ F   E+   +           I++    + + V   + P   
Sbjct: 160 R-AGLIRGREFIMKDAYSFTVDEEGMRQAYMDERGAYERIFQRLDLKYVPVFAMSGPMGG 218

Query: 435 VGSDAL 440
             S+  
Sbjct: 219 SASEEF 224



 Score = 87.5 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 26/164 (15%), Positives = 67/164 (40%), Gaps = 12/164 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN- 545
           R  + G + Q+        +   +N + +    V +    +G  + R +  + E    + 
Sbjct: 448 RGVEIGQVFQLGLKYSEALDLKVLNQNGKT---VPVWMGCYGIGVSRVLACIAETHHDDK 504

Query: 546 ---LPLWLSPIQAIVTTIT--SSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHS 599
               P+ ++P Q  V       +A E A+ + + L ++ + +  D R + +   K ++  
Sbjct: 505 GLAWPMNIAPAQVHVMATGKDEAAFEAAERLVDELSANGIEVLYDDRRKVSPGVKFKDAE 564

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  +PII + G    +  +I +R    + ++ +S+     ++  
Sbjct: 565 LIGVPIIAVAGRDTVNNGTIEVRDRDGSNSENISVDSVAQVIVD 608


>gi|332528434|ref|ZP_08404426.1| prolyl-tRNA synthetase [Hylemonella gracilis ATCC 19624]
 gi|332042113|gb|EGI78447.1| prolyl-tRNA synthetase [Hylemonella gracilis ATCC 19624]
          Length = 581

 Score =  131 bits (330), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 43/257 (16%), Positives = 93/257 (36%), Gaps = 27/257 (10%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       ++E   H+ + R   +  +   G+G+  +   G ++   + + +R 
Sbjct: 3   ASQFLISTLKEAPADAEVVSHQLMTRAGMIKKL---GAGIYTYMPMGLRVINKVAAIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P +    LWQ++G ++     +  ++      +  R F ++P +    
Sbjct: 60  EMNRAGAIELTMPVIQPAELWQETGRFEKMGPELLRIQD-----RHERDFVVQPTSEEVV 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +     KSY++LP  L +  + +R+E      GLMR R F   DA+ F          
Sbjct: 115 TDIARQEFKSYKQLPRNLYQIQTKFRDERRPRF-GLMRGREFIMKDAYSFDRDPASAQIS 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            + +     + +  FG      +        +G D         +      I  + +D I
Sbjct: 174 YQAMAQAYRAAFDRFGL---RYRAVAADSGAIGGD---------LSEEFQVIAATGEDAI 221

Query: 464 NTGVLLGEGAFYGPKFE 480
                    + Y    E
Sbjct: 222 IY----CPTSDYAANIE 234



 Score = 81.4 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 29/166 (17%), Positives = 57/166 (34%), Gaps = 13/166 (7%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NF 542
           AI R  + G I  +        NA +++ + +   P       +G  I R     IE N 
Sbjct: 413 AIERGIEIGHIFYLGTKYSKAMNATFLDENGK---PQFFEMGCYGIGITRLPAAAIEQNH 469

Query: 543 KGNLPLWL---SPIQAIVTTITSSAVE----YAQEIANLLKSHHLSIETDFRNETINYKI 595
                +W    +P   +V  I           A+++   L +  + +  D R E      
Sbjct: 470 DAKGIIWPDAIAPFTVVVCPINPDRSPEVKTAAEKLYAELLAAGVDVILDDRGERPGAMF 529

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            +  +  +P  +  GD+   E  +  +         +++ DA   +
Sbjct: 530 ADWELIGVPHRVTIGDRTLKEGKVEYQHRRDAEATPLAVGDAAAFV 575


>gi|16800424|ref|NP_470692.1| prolyl-tRNA synthetase [Listeria innocua Clip11262]
 gi|81853975|sp|Q92C35|SYP_LISIN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|16413829|emb|CAC96587.1| prolyl-tRNA synthetase [Listeria innocua Clip11262]
          Length = 568

 Score =  131 bits (330), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 43/184 (23%), Positives = 80/184 (43%), Gaps = 11/184 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E + H+ L R   +  +A   SG+  +        + + + +R +++     E+  P 
Sbjct: 17  DAEVKSHQLLLRAGFIRQVA---SGIYSYLPLATLTLRKIEAIVREELEAIGAAEMLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW +SG W  Y   +  +K      +  R F L P +     ++    +KSY+ L
Sbjct: 74  LQPAELWHESGRWADYGPELMRLKD-----RAARDFVLGPTHEELITSLLRDEIKSYKRL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKD 417
           P+ L +  + +R+E      GL+R R F   DA+ F  T E +      +H    +I+  
Sbjct: 129 PITLYQIQTKFRDEKRPRF-GLLRGREFIMKDAYSFHATSESLDETFELMHQAYSNIFSR 187

Query: 418 FGFE 421
            G E
Sbjct: 188 CGLE 191



 Score = 76.0 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/150 (17%), Positives = 58/150 (38%), Gaps = 8/150 (5%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW---LSPIQ 554
           +        NA  ++ +  +  P+++     G       I  ++   N  +W   +SP  
Sbjct: 414 LGTKYSEAMNATILDENG-RAQPIIMGCYGIGLSRILSAIAEQSNDENGLVWDKQISPFD 472

Query: 555 AIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
             +  +   +   V +A+ + + L+    S+  D R E    K  +  +  +PI I  G 
Sbjct: 473 LHLIPVNMKSEEQVAFAESLYDSLQKAGFSVLIDDRTERAGVKFADADLIGLPIRITVGK 532

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           K A+E  + ++   +    +V   + +  L
Sbjct: 533 K-AAEGIVEVKIRKTGEMIEVRQDELLNTL 561


>gi|116330596|ref|YP_800314.1| prolyl-tRNA synthetase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|122281649|sp|Q04U64|SYP_LEPBJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|116124285|gb|ABJ75556.1| Prolyl-tRNA ligase [Leptospira borgpetersenii serovar Hardjo-bovis
           JB197]
          Length = 576

 Score =  131 bits (330), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 46/217 (21%), Positives = 87/217 (40%), Gaps = 11/217 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  L        ++    HR + R        +  +G+ F+   G KI Q +   +R 
Sbjct: 3   ASKYILPTEKENPSDAVVASHRLMIRAGLAR---KSSAGLYFYLPLGLKILQKIKQIIRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E + P +     W+QSG W +    MF +K   D       +AL P +    
Sbjct: 60  EMNKTGALEFDLPILTPSDFWEQSGRWTAMGKEMFRIKDRHDLS-----YALGPTHEESF 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    LKSY++LP+ + +  + +R+E      G++R R F   DA+ F   +   +E 
Sbjct: 115 SFLLKPLLKSYKDLPLNVYQIQTKFRDEIRPRF-GVIRSREFIMKDAYSFHIDDVSLDET 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            + +      I+   G + I V+  +       S+  
Sbjct: 174 YQSMRAAYRKIFDRCGLKTIPVQADSGSMGGSASEEF 210



 Score = 67.1 bits (162), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 69/182 (37%), Gaps = 10/182 (5%)

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
            P     LK   G +   G I       ++     V   + K   + +     G + R +
Sbjct: 393 CPNCNAPLKAEKGIE--VGHIFKLGEKYTKAFGIQVLDQNGKARTLTMGCYGIG-VNRTM 449

Query: 536 GIMIENFKGN----LPLWLSPIQAIVTTITSSAVEY--AQEIANLLKSHHLSIETDFRNE 589
             +IE          P+ ++P +  + +IT    +Y  A+E  N+LK+ +L +  D R+ 
Sbjct: 450 ATVIEQRNDEKGIFWPISIAPFEVTLVSITKGEEQYSKAEEFYNVLKNENLEVFWDDRDV 509

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK-ESLPP 648
              +K+++  +   PI +  G K      I I    +   +         ++ + ESL  
Sbjct: 510 GPGFKLKDSELIGFPIRVTIGKKFFENGEISIYNRKADKEESFVFAGFENLIARVESLRQ 569

Query: 649 DC 650
           + 
Sbjct: 570 EL 571


>gi|321309527|ref|YP_004191856.1| prolyl-tRNA synthetase [Mycoplasma haemofelis str. Langford 1]
 gi|319801371|emb|CBY92017.1| prolyl-tRNA synthetase [Mycoplasma haemofelis str. Langford 1]
          Length = 467

 Score =  131 bits (330), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 64/409 (15%), Positives = 141/409 (34%), Gaps = 55/409 (13%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLD- 301
           + +  +     +         +   H +GW I++ +  ++  K  +   + ++ P  +  
Sbjct: 10  KWYESVISNSGIAFPGLVKGTLFIGH-RGWNIWEKIRDFIDAKYKQKGIKNVSFPTFIPV 68

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             + ++      +   ++ V  + D  +  + F L+P +       F + L+SY +LP+ 
Sbjct: 69  AEIEREKSRLSGFNPEIYLVSRSGDEER--QNFFLRPTSEILFSHYFRNILESYEDLPLL 126

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
             ++ +V+R E   +    +R   F   +AH     ++   E LK  +            
Sbjct: 127 FNQWCNVFRAEK--NTKAFLRTCEFHWQEAHTLHLSKEEAMEYLKFFH------------ 172

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
                               +  ++++K +L+      +  +N      E        E 
Sbjct: 173 --------------------ETYKSLVKDLLNIAFLEGEKTVNERFPGSEK---TLTLEA 209

Query: 482 ILKDAIGRDWQCGTIQVDF-NLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           I+ D  G+  Q  T      N    F+  Y +  +   +P   H+   G   R IG +I 
Sbjct: 210 IMPD--GQALQIATSHYLSKNFTETFDVKYTSRENVVSYP---HQLSAGCSTRLIGALIM 264

Query: 541 NFKGNLPLWLS----PIQAIVTTITSSAVEYAQEIANLLKS--HHLSIETDFRNETINYK 594
           +   +  L L      +      I  +  E   E+            +E DF + +  YK
Sbjct: 265 SHGDDSGLVLPLSMFDVHIKFLIINGAVTE-GSELHKKFSDELKGYKVEWDFSSRSFGYK 323

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           I+   +   P+ +I G  E       ++   S +   + +   I  + +
Sbjct: 324 IKNEEMIGTPVSVILGPSEIKSNWALVKTRLSESKVSIPMDQLISKIKE 372


>gi|307747462|gb|ADN90732.1| Prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni M1]
 gi|315931738|gb|EFV10693.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 327]
          Length = 568

 Score =  131 bits (330), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 44/229 (19%), Positives = 92/229 (40%), Gaps = 11/229 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            T+          +++    H  L R      I + GSG+  +   G ++   + + ++ 
Sbjct: 3   FTKFYAPSLKEAPKDASLPSHIFLTRAG---FIEQIGSGLYNFLPLGKRVLDKIKNIVKE 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +E+N   +    LWQ+SG ++ +   +   K   +       F L P +    
Sbjct: 60  EMDKAGAQEVNLSFITPASLWQESGRYNVFGKELLRFKDRKEN-----EFVLGPTHEEAM 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           +++  + + SY++LP+ L + G  +R+E      GL+R R F   D + F   E+     
Sbjct: 115 LSLVKNKITSYKQLPLHLYQIGLKFRDEARPRF-GLLRCREFLMKDGYSFHANEEDLGRE 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
            + ++     I +  G +   V+  +      GS      A+N    +L
Sbjct: 174 FELMYKTYSQILQRMGLDFRAVEADSGAIGGSGSKEFMVLAKNGEDDIL 222



 Score = 81.8 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 30/165 (18%), Positives = 59/165 (35%), Gaps = 9/165 (5%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNLP 547
           +  + G I       S+         + K  P  +     G   R + + IE +      
Sbjct: 406 KGIEVGHIFKLGQKYSKAMNANFLDENGKSQPFYMGCYGIGVS-RLLAVAIEASHDEKGC 464

Query: 548 LW---LSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W   L+P    +         A+E+A ++   L +  L +  D RNE    K+ +  + 
Sbjct: 465 IWNKTLAPFVLEIIVSNLKDEKALEFANKLYEDLTNLGLEVLLDDRNERFGVKMNDFELM 524

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
             P  ++ G K      I + +      + +   + + IL K+ L
Sbjct: 525 GFPYALVIG-KGLENNEIELIQREGLVKELIKTDELMEILKKKVL 568


>gi|241190576|ref|YP_002967970.1| prolyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           Bl-04]
 gi|241195982|ref|YP_002969537.1| prolyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis DSM
           10140]
 gi|240248968|gb|ACS45908.1| prolyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           Bl-04]
 gi|240250536|gb|ACS47475.1| prolyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis DSM
           10140]
 gi|295793563|gb|ADG33098.1| prolyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis V9]
          Length = 605

 Score =  131 bits (330), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 38/186 (20%), Positives = 75/186 (40%), Gaps = 8/186 (4%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
           +I +   G+  W   G  +   +   +R +I     +E++ P +L +  ++ +  W+ Y 
Sbjct: 35  YIRKAAPGIWTWLPLGLAVLNKIEDVIREEINGIGAQEVHFPALLPREPYEATHRWEEYG 94

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            N+F +K      +    + L P +      +      SY++LPV L +  + YR+E   
Sbjct: 95  DNIFRLKD-----RHEADYLLAPTHEEMFTLLVKDMYSSYKDLPVTLYQIQTKYRDEFRP 149

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              GL+R R F   DA+ F   E+   +           I++    + + V   + P   
Sbjct: 150 R-AGLIRGREFIMKDAYSFTVDEEGMRQAYMDERGAYERIFQRLDLKYVPVFAMSGPMGG 208

Query: 435 VGSDAL 440
             S+  
Sbjct: 209 SASEEF 214



 Score = 87.5 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 26/164 (15%), Positives = 67/164 (40%), Gaps = 12/164 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN- 545
           R  + G + Q+        +   +N + +    V +    +G  + R +  + E    + 
Sbjct: 438 RGVEIGQVFQLGLKYSEALDLKVLNQNGKT---VPVWMGCYGIGVSRVLACIAETHHDDK 494

Query: 546 ---LPLWLSPIQAIVTTIT--SSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHS 599
               P+ ++P Q  V       +A E A+ + + L ++ + +  D R + +   K ++  
Sbjct: 495 GLAWPMNIAPAQVHVMATGKDEAAFEAAERLVDELSANGIEVLYDDRRKVSPGVKFKDAE 554

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  +PII + G    +  +I +R    + ++ +S+     ++  
Sbjct: 555 LIGVPIIAVAGRDTVNNGTIEVRDRDGSNSENISVDSVAQVIVD 598


>gi|227549046|ref|ZP_03979095.1| prolyl-tRNA synthetase [Corynebacterium lipophiloflavum DSM 44291]
 gi|227078900|gb|EEI16863.1| prolyl-tRNA synthetase [Corynebacterium lipophiloflavum DSM 44291]
          Length = 604

 Score =  131 bits (330), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 39/203 (19%), Positives = 78/203 (38%), Gaps = 11/203 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +        GV  W   G +  + + + +R ++      E+  P 
Sbjct: 30  DAEVPSHKLLVRAGYVR---RAAPGVYSWLPLGLRTLRKIETVVREEMDAMGALELLFPA 86

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++Q+  W  Y  ++F +K      +      L P +             SY++ 
Sbjct: 87  LLPREPYEQTNRWTEYGDDLFRLKD-----RKGADMLLGPTHEEMFTVAVKSMFSSYKDF 141

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKD 417
           PV L +  + YR+E      G++R R F   D++ F  T E +     K  +    I+  
Sbjct: 142 PVTLYQIQTKYRDEARPR-AGILRGREFVMKDSYSFDMTDEGLEQSYQKHRSAYQRIFDR 200

Query: 418 FGFEKIMVKLSTRPEKRVGSDAL 440
            G    + + ++       S+  
Sbjct: 201 VGIRYEICEATSGAMGGSASEEF 223



 Score = 82.5 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 65/163 (39%), Gaps = 12/163 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G I Q+        +   ++   ++  P M    +   + R + ++ E       
Sbjct: 441 RGIELGHIFQLGRKYTEAMDVQILDEGGKRAVPTMGSYGI--GVSRMMAVVAEQRHDEKG 498

Query: 546 --LPLWLSPIQAIVTTITSSA--VEYAQEIANLLKSHHLSIETDFRNET-INYKIREHSI 600
              P+ ++P Q  V      A  ++  ++IA  L +  L +  D R +T    K ++  +
Sbjct: 499 LVWPVAIAPYQVHVVVANKDAAALQAGEDIAGELDAAGLEVLFDDRPKTSPGVKFKDAEL 558

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             +P I+I G   A    + +R  G  T + V+  + +  + +
Sbjct: 559 LGMPFIVILGRSFAE-GIVELRIRGGETLE-VASAEVVAKVRE 599


>gi|183602502|ref|ZP_02963867.1| prolyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           HN019]
 gi|219683545|ref|YP_002469928.1| prolyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           AD011]
 gi|254782886|sp|B8DTM3|SYP_BIFA0 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|183218143|gb|EDT88789.1| prolyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           HN019]
 gi|219621195|gb|ACL29352.1| prolyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           AD011]
          Length = 599

 Score =  131 bits (330), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 38/186 (20%), Positives = 75/186 (40%), Gaps = 8/186 (4%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
           +I +   G+  W   G  +   +   +R +I     +E++ P +L +  ++ +  W+ Y 
Sbjct: 29  YIRKAAPGIWTWLPLGLAVLNKIEDVIREEINGIGAQEVHFPALLPREPYEATHRWEEYG 88

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            N+F +K      +    + L P +      +      SY++LPV L +  + YR+E   
Sbjct: 89  DNIFRLKD-----RHEADYLLAPTHEEMFTLLVKDMYSSYKDLPVTLYQIQTKYRDEFRP 143

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              GL+R R F   DA+ F   E+   +           I++    + + V   + P   
Sbjct: 144 R-AGLIRGREFIMKDAYSFTVDEEGMRQAYMDERGAYERIFQRLDLKYVPVFAMSGPMGG 202

Query: 435 VGSDAL 440
             S+  
Sbjct: 203 SASEEF 208



 Score = 87.5 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 26/164 (15%), Positives = 67/164 (40%), Gaps = 12/164 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN- 545
           R  + G + Q+        +   +N + +    V +    +G  + R +  + E    + 
Sbjct: 432 RGVEIGQVFQLGLKYSEALDLKVLNQNGKT---VPVWMGCYGIGVSRVLACIAETHHDDK 488

Query: 546 ---LPLWLSPIQAIVTTIT--SSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHS 599
               P+ ++P Q  V       +A E A+ + + L ++ + +  D R + +   K ++  
Sbjct: 489 GLAWPMNIAPAQVHVMATGKDEAAFEAAERLVDELSANGIEVLYDDRRKVSPGVKFKDAE 548

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  +PII + G    +  +I +R    + ++ +S+     ++  
Sbjct: 549 LIGVPIIAVAGRDTVNNGTIEVRDRDGSNSENISVDSVAQVIVD 592


>gi|317508518|ref|ZP_07966185.1| prolyl-tRNA synthetase [Segniliparus rugosus ATCC BAA-974]
 gi|316253209|gb|EFV12612.1| prolyl-tRNA synthetase [Segniliparus rugosus ATCC BAA-974]
          Length = 606

 Score =  131 bits (330), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 46/235 (19%), Positives = 91/235 (38%), Gaps = 14/235 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E  +H+ L R            GV  W   G K  + + + +R ++     +EI  P 
Sbjct: 19  DAEVPNHKLLVRGGY---FRRVSPGVFAWLPLGLKALRQIENVVREEMDGIGGQEILLPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +  +  ++ S  W  Y  N+F +K      +    + L P +      +      SY++L
Sbjct: 76  LAPRQPYETSNRWTEYGDNLFRLKD-----RKGGDYLLAPTHEELFALLVKGEYTSYKDL 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKD 417
           PV L +  + YR+E      G++R R F   D++ F   E         H      I+  
Sbjct: 131 PVILYQIQTKYRDEERPR-AGILRGREFVMKDSYSFDVDEAGNKAAYHAHREAYQRIFDR 189

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDA---ENIMKGVLDTIKNSSQDRINTGVLL 469
            G   ++V  ++       S+    ++   E+     L++   ++ + + T V  
Sbjct: 190 LGISYVIVAATSGAMGGSASEEFLAESAIGEDTYVRCLESGYAANVEAVTTPVAE 244



 Score = 74.0 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 60/166 (36%), Gaps = 10/166 (6%)

Query: 484 KDAIGRDWQCGTIQVDFNLP---SRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMI 539
            D  G+      I++           +AF V+   E   P  +    +G  + R +G++ 
Sbjct: 413 PDGAGKLVAARGIEIGHVFALGTKYTDAFSVDVLGENGKPARLIMGSYGIGVSRLVGVIA 472

Query: 540 ENFKG----NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKS--HHLSIETDFRNETINY 593
           E +        P  ++P Q  V +    + E         +   H L +  D R  +   
Sbjct: 473 EQWHDEKGLRWPPQVAPFQVHVLSTGKGSAEAEAAEQYAAELEAHGLRVLLDDRKASPGV 532

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
           K  +  +   P+I++ G   ASE  + ++   +  +  V     +P
Sbjct: 533 KFADAELLGAPVIVVVGRDWASEGKVELKERFAGESGSVDADVVVP 578


>gi|33863527|ref|NP_895087.1| prolyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9313]
 gi|81834835|sp|Q7TUU4|SYP_PROMM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|33640976|emb|CAE21434.1| tRNA synthetases, class-II (G, H, P and S):Prolyl-tRNA synthetase
           [Prochlorococcus marinus str. MIT 9313]
          Length = 599

 Score =  131 bits (330), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 49/207 (23%), Positives = 86/207 (41%), Gaps = 8/207 (3%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +  +    SG+  +    W++ + + S ++ ++      E   PQ
Sbjct: 17  DAEIASHQLLLRGGYIRRV---TSGIYAYLPLMWRVLRKITSIVQEEMDATGALETLLPQ 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW++SG W  Y A    +   +D  +  R   L P +     ++    L+SYR+L
Sbjct: 74  LQPAELWRRSGRWQGYTAGEGLMFHLED--RQGRELGLGPTHEEVITSLAGDLLRSYRQL 131

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKD 417
           PV L +  S +R+E      GLMR R F   DA+ F + E       +  +     I+  
Sbjct: 132 PVTLYQIQSKFRDEIRPRF-GLMRGREFIMKDAYSFHSCEADLAMTYRAMDEAYQRIFSR 190

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDA 444
            G E + V+  +       S      A
Sbjct: 191 CGLETVAVEADSGAIGGASSQEFMVTA 217



 Score = 82.9 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 62/163 (38%), Gaps = 9/163 (5%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF---KG 544
           R  + G I Q+         A + N    +  P  +     G        + ++      
Sbjct: 430 RGIEVGHIFQLGRKYSEALEACFTNDQGTQE-PFWMGCYGIGISRLAQAAVEQHHDEAGM 488

Query: 545 NLPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             PL ++P + I+           + A+++ + L++  +    D R E    K ++  + 
Sbjct: 489 KWPLAIAPFEVIIVVANIQDEVQQKLAEQLYSELQAADIEALLDDRTERAGVKFKDADLI 548

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            IP  ++ G ++A++  + + +  S   Q +S   A   L K+
Sbjct: 549 GIPWRVVVG-RDAAKGQVELIQRSSRKVQILSAKQAFTALVKD 590


>gi|195953061|ref|YP_002121351.1| prolyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
 gi|226701299|sp|B4U8B2|SYP_HYDS0 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|195932673|gb|ACG57373.1| prolyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
          Length = 565

 Score =  131 bits (330), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 49/233 (21%), Positives = 93/233 (39%), Gaps = 13/233 (5%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTP 297
            E+E   HR L +      I +  SG+       +++ + + + +R ++     +E+   
Sbjct: 16  SETEAASHRFLTKAG---FIKQVASGIYELTPIAFRVLKKIENIVRDEMDKAGAQELLLT 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    LW+++G WD Y   +F +K   D     R + L P +      +    ++SY++
Sbjct: 73  ILNPAELWKETGRWDYYGNELFKLKDRSD-----RDYCLGPTHEEEITDLVRKTVRSYKQ 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYK 416
           LP+ L +  + +R+E     +GL+R R F   DA+ F T E+        +     +I+K
Sbjct: 128 LPLNLYQIHTKFRDEKRPR-YGLIRGREFIMKDAYSFDTDEESAKNSYDIMVKAYKNIFK 186

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL 469
                 +MVK          S      A       L     +     NT ++ 
Sbjct: 187 RLNLNILMVKADVGQIGGKSSHEF--VAITKYGEALIAYCENCGYAANTEIVE 237



 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 27/145 (18%), Positives = 58/145 (40%), Gaps = 10/145 (6%)

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG----NLPLWLSPIQAIV-TTI 560
             AF+ +    +  PV++     G I R I  ++E +        PL ++P Q ++    
Sbjct: 417 MKAFFTDKDGVEK-PVVMGCYGIG-ISRLIAALVEQYHDEKGIKWPLPVAPFQVLISCVN 474

Query: 561 TSSAVEYA--QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERS 618
           TS  ++Y+  + +   L    + +  D R+ +   K  +  +  IP  I+ G K A +  
Sbjct: 475 TSDDIQYSTSEHLYKSLTQEGIEVLFDDRDVSPGVKFNDADLIGIPYRIVVGKK-AKDGL 533

Query: 619 IGIRRFGSTTTQKVSLLDAIPILTK 643
           + +    +     V +   +  +  
Sbjct: 534 VEVVDRHTLKAVDVPIDKVLDYIKD 558


>gi|305433094|ref|ZP_07402250.1| proline--tRNA ligase [Campylobacter coli JV20]
 gi|304443795|gb|EFM36452.1| proline--tRNA ligase [Campylobacter coli JV20]
          Length = 569

 Score =  131 bits (330), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 47/263 (17%), Positives = 98/263 (37%), Gaps = 18/263 (6%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++          +++    H  L R      + + GSG+  +   G ++   + + ++ 
Sbjct: 4   FSKLYAPSLKEAPKDATLPSHIFLTRAG---FVEQIGSGLYNFLPLGKRVLDKIKNIVKE 60

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +E+N   +    LWQ+SG ++ +   +   K   +       F L P +    
Sbjct: 61  EMDKAGAQEVNLSFITPASLWQESGRYNVFGKELLRFKDRKEN-----EFVLGPTHEEAM 115

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           +++  + + SY++LP+ L + G  +R+E      GL+R R F   D + F   E+     
Sbjct: 116 LSLVKNKITSYKQLPLHLYQIGLKFRDEARPRF-GLLRCREFLMKDGYSFHANEEDLGRE 174

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            + ++     I +  G +   V+  +      GS      A+N    +L          +
Sbjct: 175 FELMYKTYSQILQRMGLDFRAVEADSGAIGGSGSKEFMVLAKNGEDDILICENCDYAANV 234

Query: 464 NTGV-------LLGEGAFYGPKF 479
              V            A Y  KF
Sbjct: 235 EAAVRANKTCDEERPEANYASKF 257



 Score = 77.5 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 26/164 (15%), Positives = 57/164 (34%), Gaps = 9/164 (5%)

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGN 545
           + +  + G I       S+         + K  P  +     G   R + + IE N    
Sbjct: 405 LSKGIEVGHIFKLGQKYSKAMNANFLDENGKSKPFYMGCYGIGVS-RLLAVAIEANHDEK 463

Query: 546 LPLW---LSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
             +W   L+P    +         ++E+A ++   L +  + +  D RNE    K+ +  
Sbjct: 464 GCIWNKTLAPFTLEIIISNIKDEKSLEFATKLYEDLSNAGIEVLLDDRNERFGVKMNDFE 523

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +   P  ++ G K   +  +      +   + +S  +    + K
Sbjct: 524 LMGFPYALVVG-KGLEKDELEFIDRKTLEKKIISSKEVFDFIKK 566


>gi|189485415|ref|YP_001956356.1| prolyl-tRNA synthetase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
 gi|226701354|sp|B1H063|SYP_UNCTG RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|170287374|dbj|BAG13895.1| prolyl-tRNA synthetase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
          Length = 569

 Score =  131 bits (330), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 46/218 (21%), Positives = 92/218 (42%), Gaps = 11/218 (5%)

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR 284
           + ++  +        +++    + + R   +  +A   SG       G K+ + + + +R
Sbjct: 2   FFSKMLIPTLKEAPSDADIVSVKLMVRSGMIRKLA---SGFYELLPLGLKVLRKVENIIR 58

Query: 285 RKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPG 343
           +++     +E+  P V  + LW ++  W++Y   +F +K   D       F L P     
Sbjct: 59  QEMNSAGGQEVIFPLVFPKALWLETDRWNAYGKELFKLKDRKDA-----EFCLAPTAEEV 113

Query: 344 HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE 403
              +    +KSY++LPV L +FG+ +R+E      G+MR R F   DA+ F   E    +
Sbjct: 114 VTDLIRKDIKSYKQLPVMLYQFGTKFRDEIRPRF-GVMRSREFLMKDAYSFHADEADLEK 172

Query: 404 CLK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
             K + +   +I    GF+   V+ ++       S   
Sbjct: 173 YYKTMFDAYTNICIKCGFQFRAVEAASGVIGGSFSHEF 210



 Score = 79.4 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 59/153 (38%), Gaps = 13/153 (8%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW---LSPIQ 554
           +        NA Y++++ ++   +++     G       I+ ++   +  +W   ++P +
Sbjct: 412 LGDKYSKSMNASYLDANGKEKF-IIMGCYGIGVTRILAAIIEQSHDDDGIIWTNNIAPFE 470

Query: 555 AIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
            ++  +        E  ++I   L S  L +  D R+E    K ++  +  IP  I   +
Sbjct: 471 VVIVPLNYADEKTKETTEKIYKELSSKGLDVLIDDRDERAGIKFKDADLIGIPYRITISE 530

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K  +  ++ ++             DA+ +   E
Sbjct: 531 KNLANGNVELKARRDGK------DDAVRLFKPE 557


>gi|260424720|ref|ZP_05778980.1| proline--tRNA ligase [Dialister invisus DSM 15470]
 gi|260402944|gb|EEW96491.1| proline--tRNA ligase [Dialister invisus DSM 15470]
          Length = 576

 Score =  131 bits (330), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 40/217 (18%), Positives = 80/217 (36%), Gaps = 11/217 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++           ++    H+ + +   +  ++   +G+  +     +  + +   +R 
Sbjct: 5   ASKLYSPTLREIPSDAVVVSHQYMLKAGMMRKVS---NGLYAFLPLALRSVRKVEDIVRE 61

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +EI  P      +W+QS  WD Y   MF +       +    + L P +    
Sbjct: 62  EMNAIGSQEILMPITQPAEIWKQSERWDVYGEEMFKLND-----RHGHEYCLGPTHEELV 116

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +      SY++LPV L +  + YR+E      GLMR R F   DA+ F   E+  +  
Sbjct: 117 TVLAKMDTSSYKQLPVSLYQIQNKYRDEKRPRF-GLMRSREFIMKDAYTFDMDEEGLDRQ 175

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
              +++    I+   G     V   +      GS   
Sbjct: 176 YHLMYDAYTRIFTRCGLHFRPVVADSGAIGGSGSHEF 212



 Score = 83.3 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 25/146 (17%), Positives = 56/146 (38%), Gaps = 9/146 (6%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPI 553
           +      +    Y++    K HP+++     G I R +   IE          P+ ++P 
Sbjct: 416 LGTKYSEKLGCTYLDRDG-KTHPMVMGCYGIG-ITRTVAASIEQNHDKDGIIWPVAIAPY 473

Query: 554 QAIVTTITSS---AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           + ++    +     +  A+ + + ++     +  D R+E    K ++  +   PI +  G
Sbjct: 474 EVVIVPANNKDEGVMNAARHLYDKMEDCRDEVILDDRDERAGIKFKDADLIGYPIRVTIG 533

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLD 636
            K      + +R   S    +V+L D
Sbjct: 534 KKWKESGLVEVRLRRSGVVSEVALAD 559


>gi|163839404|ref|YP_001623809.1| prolyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
 gi|162952880|gb|ABY22395.1| prolyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
          Length = 619

 Score =  131 bits (330), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 39/203 (19%), Positives = 80/203 (39%), Gaps = 11/203 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ + R   +        G+  W   G ++   + + +R ++     +E++ P 
Sbjct: 32  DAEIASHKLMVRAGYIR---RAAPGIYSWLPLGLRVLGKVEAIIREEMAAIGSQEVHFPA 88

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L    ++ +  W  Y   +F +K      +    + L P +      +      SY++L
Sbjct: 89  LLPCEPYEATNRWTEYGDGIFRLKD-----RKGNDYLLAPTHEEMFTLLVKDLYGSYKDL 143

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKD 417
           PV L +  + YR+E      GLMR R F   D++ F   +   +   + H      I++ 
Sbjct: 144 PVSLFQIQNKYRDEARPR-AGLMRGREFIMKDSYSFDIDDAGLDISYEAHRAAYFKIFER 202

Query: 418 FGFEKIMVKLSTRPEKRVGSDAL 440
              E + VK +        S+  
Sbjct: 203 LSLEVVAVKATAGAMGGSKSEEF 225



 Score = 79.4 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/215 (15%), Positives = 81/215 (37%), Gaps = 35/215 (16%)

Query: 436 GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGT 495
           G D  WD       GV++ ++    D    G    E A               R  + G 
Sbjct: 423 GRDFAWD-------GVIEAVEIREGDEAPDGSGPLEIA---------------RGIETGH 460

Query: 496 I-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN----LPLW 549
           + Q+       F+   ++ + ++   V++    +G  + R +  + E    +     P+ 
Sbjct: 461 VFQLGRKYAEIFDLKVLDQNGKQ---VVVTMGSYGVGVTRAVAAIAEGNNDDRGLVWPIA 517

Query: 550 LSP--IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPII 606
           ++P  +  +     S   E A+++A  L++  L +  D R + +   K  +  +  +P++
Sbjct: 518 VAPADVHVVAVGRDSEVFETAEKLAADLEAAGLDVILDDRQKVSPGVKFGDAELIGVPMV 577

Query: 607 IICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           +  G +   +  + ++   +     V + D +  +
Sbjct: 578 LAVG-RGLVDGVVELKNRRTGEPNNVPVADTVAEV 611


>gi|332809089|ref|XP_513427.3| PREDICTED: probable prolyl-tRNA synthetase, mitochondrial [Pan
           troglodytes]
          Length = 475

 Score =  131 bits (330), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 66/380 (17%), Positives = 126/380 (33%), Gaps = 37/380 (9%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I     G         +  + L+  + ++++    +++N P +    LWQ +  WD    
Sbjct: 80  IYPASPGCYHLLPYTVRAMEKLVRVIDQEMQAIGGQKVNMPSLSPAELWQATNRWDLMGK 139

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPSG 375
            +  ++      +  + + L P +     A+     K SY++LP  L +    +R+EP  
Sbjct: 140 ELLRLRD-----RHGKEYCLGPTHEEAITALIASQKKLSYKQLPFLLYQVTRKFRDEPRP 194

Query: 376 SLHGLMRVRGFTQDDAHVFCT-KEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              GL+R R F   D + F +  E        + +   S++   G   + V+        
Sbjct: 195 RF-GLLRGREFYMKDMYTFDSSPEAAQQTYSLVCDAYCSLFNKLGLPFVKVQADVGTIGG 253

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
             S        +I +  L      S       + L +                G   +  
Sbjct: 254 TVSHEF-QLPVDIGEDRLAICPRCSFSANMETLDLSQ---------MNCPACQGPLTKTK 303

Query: 495 TIQVDFNLP---SRFNAFYVNSHSEKCHPVMIHRAVFG-SIERFIGIMIENFKG----NL 546
            I+V           + F     +    P +     +G  + R +   IE          
Sbjct: 304 GIEVGHTFYLGTKYSSIFNAQFTNVCGKPTLAEMGCYGLGVTRILAAAIEVLSTEDCVRW 363

Query: 547 PLWLSPIQAIVTTITSSAVEYAQ-EIANLLKSH--------HLSIETDFRNE-TINYKIR 596
           P  L+P QA +      + E A  E+   L  H        H  +  D R   TI  +++
Sbjct: 364 PSLLAPYQACLIPPKKGSKEQAASELIGQLYDHITEAVPQLHGEVLLDDRTHLTIGNRLK 423

Query: 597 EHSIKKIPIIIICGDKEASE 616
           + +    P +II G +   +
Sbjct: 424 DANKFGYPFVIIAGKRALED 443


>gi|34303926|ref|NP_689481.2| probable prolyl-tRNA synthetase, mitochondrial precursor [Homo
           sapiens]
 gi|73919761|sp|Q7L3T8|SYPM_HUMAN RecName: Full=Probable prolyl-tRNA synthetase, mitochondrial;
           AltName: Full=Proline--tRNA ligase; Short=ProRS; Flags:
           Precursor
 gi|33873290|gb|AAH11758.2| Prolyl-tRNA synthetase 2, mitochondrial (putative) [Homo sapiens]
 gi|39644604|gb|AAH07956.2| Prolyl-tRNA synthetase 2, mitochondrial (putative) [Homo sapiens]
 gi|56204888|emb|CAI18996.1| prolyl-tRNA synthetase 2, mitochondrial (putative) [Homo sapiens]
 gi|119627074|gb|EAX06669.1| prolyl-tRNA synthetase (mitochondrial)(putative) [Homo sapiens]
 gi|158260381|dbj|BAF82368.1| unnamed protein product [Homo sapiens]
 gi|312152388|gb|ADQ32706.1| prolyl-tRNA synthetase 2, mitochondrial (putative) [synthetic
           construct]
          Length = 475

 Score =  131 bits (330), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 66/380 (17%), Positives = 126/380 (33%), Gaps = 37/380 (9%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I     G         +  + L+  + ++++    +++N P +    LWQ +  WD    
Sbjct: 80  IYPASPGCYHLLPYTVRAMEKLVRVIDQEMQAIGGQKVNMPSLSPAELWQATNRWDLMGK 139

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPSG 375
            +  ++      +  + + L P +     A+     K SY++LP  L +    +R+EP  
Sbjct: 140 ELLRLRD-----RHGKEYCLGPTHEEAITALIASQKKLSYKQLPFLLYQVTRKFRDEPRP 194

Query: 376 SLHGLMRVRGFTQDDAHVFCT-KEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              GL+R R F   D + F +  E        + +   S++   G   + V+        
Sbjct: 195 RF-GLLRGREFYMKDMYTFDSSPEAAQQTYSLVCDAYCSLFNKLGLPFVKVQADVGTIGG 253

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
             S        +I +  L      S       + L +                G   +  
Sbjct: 254 TVSHEF-QLPVDIGEDRLAICPRCSFSANMETLDLSQ---------MNCPACQGPLTKTK 303

Query: 495 TIQVDFNLP---SRFNAFYVNSHSEKCHPVMIHRAVFG-SIERFIGIMIENFKG----NL 546
            I+V           + F     +    P +     +G  + R +   IE          
Sbjct: 304 GIEVGHTFYLGTKYSSIFNAQFTNVCGKPTLAEMGCYGLGVTRILAAAIEVLSTEDCVRW 363

Query: 547 PLWLSPIQAIVTTITSSAVEYAQ-EIANLLKSH--------HLSIETDFRNE-TINYKIR 596
           P  L+P QA +      + E A  E+   L  H        H  +  D R   TI  +++
Sbjct: 364 PSLLAPYQACLIPPKKGSKEQAASELIGQLYDHITEAVPQLHGEVLLDDRTHLTIGNRLK 423

Query: 597 EHSIKKIPIIIICGDKEASE 616
           + +    P +II G +   +
Sbjct: 424 DANKFGYPFVIIAGKRALED 443


>gi|5911945|emb|CAB55948.1| hypothetical protein [Homo sapiens]
          Length = 409

 Score =  131 bits (330), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 66/380 (17%), Positives = 126/380 (33%), Gaps = 37/380 (9%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I     G         +  + L+  + ++++    +++N P +    LWQ +  WD    
Sbjct: 14  IYPASPGCYHLLPYTVRAMEKLVRVIDQEMQAIGGQKVNMPSLSPAELWQATNRWDLMGK 73

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPSG 375
            +  ++      +  + + L P +     A+     K SY++LP  L +    +R+EP  
Sbjct: 74  ELLRLRD-----RHGKEYCLGPTHEEAITALIASQKKLSYKQLPFLLYQVTRKFRDEPRP 128

Query: 376 SLHGLMRVRGFTQDDAHVFCT-KEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              GL+R R F   D + F +  E        + +   S++   G   + V+        
Sbjct: 129 RF-GLLRGREFYMKDMYTFDSSPEAAQQTYSLVCDAYCSLFNKLGLPFVKVQADVGTIGG 187

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
             S        +I +  L      S       + L +                G   +  
Sbjct: 188 TVSHEF-QLPVDIGEDRLAICPRCSFSANMETLDLSQ---------MNCPACQGPLTKTK 237

Query: 495 TIQVDFNLP---SRFNAFYVNSHSEKCHPVMIHRAVFG-SIERFIGIMIENFKG----NL 546
            I+V           + F     +    P +     +G  + R +   IE          
Sbjct: 238 GIEVGHTFYLGTKYSSIFNAQFTNVCGKPTLAEMGCYGLGVTRILAAAIEVLSTEDCVRW 297

Query: 547 PLWLSPIQAIVTTITSSAVEYAQ-EIANLLKSH--------HLSIETDFRNE-TINYKIR 596
           P  L+P QA +      + E A  E+   L  H        H  +  D R   TI  +++
Sbjct: 298 PSLLAPYQACLIPPKKGSKEQAASELIGQLYDHITEAVPQLHGEVLLDDRTHLTIGNRLK 357

Query: 597 EHSIKKIPIIIICGDKEASE 616
           + +    P +II G +   +
Sbjct: 358 DANKFGYPFVIIAGKRALED 377


>gi|10438145|dbj|BAB15178.1| unnamed protein product [Homo sapiens]
          Length = 402

 Score =  131 bits (330), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 66/380 (17%), Positives = 126/380 (33%), Gaps = 37/380 (9%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I     G         +  + L+  + ++++    +++N P +    LWQ +  WD    
Sbjct: 7   IYPASPGCYHLLPYTVRAMEKLVRVIDQEMQAIGGQKVNMPSLSPAELWQATNRWDLMGK 66

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPSG 375
            +  ++      +  + + L P +     A+     K SY++LP  L +    +R+EP  
Sbjct: 67  ELLRLRD-----RHGKEYCLGPTHEEAITALIASQKKLSYKQLPFLLYQVTRKFRDEPRP 121

Query: 376 SLHGLMRVRGFTQDDAHVFCT-KEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              GL+R R F   D + F +  E        + +   S++   G   + V+        
Sbjct: 122 RF-GLLRGREFYMKDMYTFDSSPEAAQQTYSLVCDAYCSLFNKLGLPFVKVQADVGTIGG 180

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
             S        +I +  L      S       + L +                G   +  
Sbjct: 181 TVSHEF-QLPVDIGEDRLAICPRCSFSANMETLDLSQ---------MNCPACQGPLTKTK 230

Query: 495 TIQVDFNLP---SRFNAFYVNSHSEKCHPVMIHRAVFG-SIERFIGIMIENFKG----NL 546
            I+V           + F     +    P +     +G  + R +   IE          
Sbjct: 231 GIEVGHTFYLGTKYSSIFNAQFTNVCGKPTLAEMGCYGLGVTRILAAAIEVLSTEDCVRW 290

Query: 547 PLWLSPIQAIVTTITSSAVEYAQ-EIANLLKSH--------HLSIETDFRNE-TINYKIR 596
           P  L+P QA +      + E A  E+   L  H        H  +  D R   TI  +++
Sbjct: 291 PSLLAPYQACLIPPKKGSKEQAASELIGQLYDHITEAVPQLHGEVLLDDRTHLTIGNRLK 350

Query: 597 EHSIKKIPIIIICGDKEASE 616
           + +    P +II G +   +
Sbjct: 351 DANKFGYPFVIIAGKRALED 370


>gi|313623934|gb|EFR94040.1| prolyl-tRNA synthetase [Listeria innocua FSL J1-023]
          Length = 568

 Score =  131 bits (330), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 43/184 (23%), Positives = 80/184 (43%), Gaps = 11/184 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E + H+ L R   +  +A   SG+  +        + + + +R +++     E+  P 
Sbjct: 17  DAEVKSHQLLLRAGFIRQVA---SGIYSYLPLATLTLRKIEAIVREELEAIGAAEMLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW +SG W  Y   +  +K      +  R F L P +     ++    +KSY+ L
Sbjct: 74  LQPAELWHESGRWADYGPELMRLKD-----RAARDFVLGPTHEELITSLLRDEIKSYKRL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKD 417
           P+ L +  + +R+E      GL+R R F   DA+ F  T E +      +H    +I+  
Sbjct: 129 PITLYQIQTKFRDEKRPRF-GLLRGREFIMKDAYSFHATSESLDETFELMHQAYSNIFSR 187

Query: 418 FGFE 421
            G E
Sbjct: 188 CGLE 191



 Score = 76.0 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/150 (17%), Positives = 58/150 (38%), Gaps = 8/150 (5%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW---LSPIQ 554
           +        NA  ++ +  +  P+++     G       I  ++   N  +W   +SP  
Sbjct: 414 LGTKYSEAMNATILDENG-RAQPIIMGCYGIGLSRILSAIAEQSNDENGLVWDKQISPFD 472

Query: 555 AIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
             +  +   +   V +A+ + + L+    S+  D R E    K  +  +  +PI I  G 
Sbjct: 473 LHLIPVNMKSEEQVAFAESLYDSLQKAGFSVLIDDRTERAGVKFADADLIGLPIRITVGK 532

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           K A+E  + ++   +    +V   + +  L
Sbjct: 533 K-AAEGIVEVKIRKTGEMIEVRQDELLNTL 561


>gi|150003988|ref|YP_001298732.1| uridine kinase [Bacteroides vulgatus ATCC 8482]
 gi|254880764|ref|ZP_05253474.1| uridine kinase [Bacteroides sp. 4_3_47FAA]
 gi|294778026|ref|ZP_06743460.1| phosphoribulokinase/uridine kinase family protein [Bacteroides
           vulgatus PC510]
 gi|319639774|ref|ZP_07994504.1| uridine kinase [Bacteroides sp. 3_1_40A]
 gi|149932412|gb|ABR39110.1| uridine kinase [Bacteroides vulgatus ATCC 8482]
 gi|254833557|gb|EET13866.1| uridine kinase [Bacteroides sp. 4_3_47FAA]
 gi|294448084|gb|EFG16650.1| phosphoribulokinase/uridine kinase family protein [Bacteroides
           vulgatus PC510]
 gi|317388591|gb|EFV69440.1| uridine kinase [Bacteroides sp. 3_1_40A]
          Length = 554

 Score =  131 bits (330), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 45/227 (19%), Positives = 95/227 (41%), Gaps = 2/227 (0%)

Query: 15  KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVI 73
           KNFP+ ++  D+    +  +    V+  +N KV  L+        +E +   +P  +   
Sbjct: 13  KNFPIGSSLLDIYNGFNLDIPYGPVSAKVNNKVEGLNYRAYNNKDVEFLNILNPSGMRTY 72

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
             S   I+ +AV+ ++P+ ++ +   +  G+Y      +    D++++I+++M+EI+  +
Sbjct: 73  VRSLCFILCKAVEDLYPDGKIMLEHPVSKGYYCALQIGRETGLDDVSRIKQRMKEIVEAN 132

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQ 193
            PF +      +  ELF  K    KV +LE+   +     Y   +  D   G  + STG 
Sbjct: 133 IPFHRFECHTTEVVELFRRKGMMDKVRLLET-SGELYSYYYTLEDTIDYYYGSLLPSTGY 191

Query: 194 VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           ++KF  +    G   R  + +               E+ +      +
Sbjct: 192 IRKFDIVKYYDGLLLRVPNRQNPEILEEVVKQEKMLEVFKEHRRWNQ 238


>gi|170782218|ref|YP_001710551.1| prolyl-tRNA synthetase [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|189083492|sp|B0RDZ1|SYP_CLAMS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|169156787|emb|CAQ01950.1| prolyl tRNA synthetase [Clavibacter michiganensis subsp.
           sepedonicus]
          Length = 590

 Score =  131 bits (330), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 40/216 (18%), Positives = 82/216 (37%), Gaps = 11/216 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++E   HR L R   +        G+  W   G ++   + + +R +
Sbjct: 6   SKLFVRTLREDPVDAEVASHRLLVRAGYIR---RQAPGIFAWLPLGLRVKNKVEAIVREE 62

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++    +E++ P +L    +Q +G +D Y   MF ++             L P +     
Sbjct: 63  MERIGAQEVHFPALLPAEPYQATGRYDEYGPGMFRLEDRKRAP-----MVLAPTHEEFFA 117

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +      SY++LP+ + +    YR+E      G++R R FT  DA+ F   +       
Sbjct: 118 LLVKDLYSSYKDLPLSIYQIQDKYRDEARPR-AGILRGREFTMKDAYSFDHTDAGLAVSY 176

Query: 406 KIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           +        I++  G E ++V           S+  
Sbjct: 177 QAQRDAYERIFQRLGLEYVIVAADAGAMGGSKSEEF 212



 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/162 (16%), Positives = 60/162 (37%), Gaps = 11/162 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF-KGNL 546
           R  + G + ++            ++ + +     M    +   I R + ++ E    G  
Sbjct: 429 RGTEIGHVFELGRKYAEALGLKVLDENGKLVTVTMGSYGI--GITRNLALVAEATQDGRG 486

Query: 547 PLWLSP-----IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSI 600
            LW +      +  ++T    +    A+E+ + L +  L +  D R + +   K  +  +
Sbjct: 487 LLWPASISPFDVHVVMTGKDPAVGTAAEELVDALDAAGLDVLFDDRPKVSPGVKFGDAEL 546

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             +P ++I G + A +    +    +     V+L D    LT
Sbjct: 547 IGVPTVVIVG-RGAVDGMAELWDRRTNERTPVALADVAGALT 587


>gi|148273336|ref|YP_001222897.1| prolyl-tRNA synthetase [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|166980116|sp|A5CSZ7|SYP_CLAM3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|147831266|emb|CAN02222.1| proS [Clavibacter michiganensis subsp. michiganensis NCPPB 382]
          Length = 590

 Score =  131 bits (330), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 40/216 (18%), Positives = 82/216 (37%), Gaps = 11/216 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++E   HR L R   +        G+  W   G ++   + + +R +
Sbjct: 6   SKLFVRTLREDPVDAEVASHRLLVRAGYIR---RQAPGIFAWLPLGLRVKNKVEAIVREE 62

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++    +E++ P +L    +Q +G +D Y   MF ++             L P +     
Sbjct: 63  MERIGAQEVHFPALLPAEPYQATGRYDEYGPGMFRLEDRKRAP-----MVLAPTHEEFFA 117

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +      SY++LP+ + +    YR+E      G++R R FT  DA+ F   +       
Sbjct: 118 LLVKDLYSSYKDLPLSIYQIQDKYRDEARPR-AGILRGREFTMKDAYSFDHTDAGLAVSY 176

Query: 406 KIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           +        I++  G E ++V           S+  
Sbjct: 177 QAQRDAYERIFQRLGLEYVIVAADAGAMGGSKSEEF 212



 Score = 66.7 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/177 (15%), Positives = 64/177 (36%), Gaps = 11/177 (6%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           P  +       GR  + G + ++            ++ + +     M    +   I R +
Sbjct: 417 PAPDGSGPITAGRGTEIGHVFELGRKYAEALGLKVLDENGKLVTVTMGSYGI--GITRNL 474

Query: 536 GIMIENF-KGNLPLWLSP-----IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE 589
            ++ E    G   LW +      +  ++T         ++E+ + L +  L +  D R +
Sbjct: 475 ALVAEATQDGRGLLWPASISPFDVHVVMTGKGDEIASASEELVDALDAAGLDVLFDDRPK 534

Query: 590 -TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
            +   K  +  +  +P I+I G + A +    +    +     V+L D +  LT + 
Sbjct: 535 VSPGVKFGDAELIGVPTIVIVG-RGAVDGMAELWDRRTNERTPVALADVVGALTADR 590


>gi|311259273|ref|XP_003128020.1| PREDICTED: probable prolyl-tRNA synthetase, mitochondrial-like [Sus
           scrofa]
          Length = 472

 Score =  131 bits (330), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 72/404 (17%), Positives = 140/404 (34%), Gaps = 30/404 (7%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I     G         +  + L+  + ++++    +++N P +    LW+ +  WDS   
Sbjct: 77  IHPASPGCYHLLPYTVRAMEKLVRVVDQEMQAIGGQKVNMPSLSPAELWRATSRWDSMGK 136

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL-KSYRELPVRLAEFGSVYRNEPSG 375
            +  ++      +  + + L P +     A+       SY++LPV L +    +R+EP  
Sbjct: 137 ELLRLRD-----RHGKEYCLGPTHEEAITALVASQKTLSYKQLPVLLYQVTRKFRDEPRP 191

Query: 376 SLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              GL+R R F   D + F  + E        + +   S++   G + + V+        
Sbjct: 192 RF-GLLRGREFYMKDMYTFDSSPEAARRTYSLVCDAYGSLFDRLGLQCLQVQADVGSIGG 250

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
             S        ++ +  L      S       + L +     P  +  L +  G +    
Sbjct: 251 TMSHEF-QLPVDVGEDRLALCPRCSFSANVETLDLAQTN--CPACQGPLTETKGIEV-GH 306

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG----NLPLWL 550
           T  +     S FNA + N H +     M      G   R +   IE          P  L
Sbjct: 307 TFYLGTKYSSIFNAQFTNVHGKASLAEM-GCYGLGVT-RILAAAIEVLSAEDCIRWPGLL 364

Query: 551 SPIQAIVTTITSSA-VEYAQEIANLLKSH--------HLSIETDFRNE-TINYKIREHSI 600
           +P Q  +      +  E A E+   L  H           +  D R   TI  ++++   
Sbjct: 365 APYQVCLIPPKKGSKEEAAAELTGHLYDHITEAVPQLRGEVLLDDRTHLTIGNRLKDADK 424

Query: 601 KKIPIIIICGDKEASE-RSIGIRRFGSTTTQKVSLLDAIPILTK 643
              P +II G +   E     +R   +     ++    + +L++
Sbjct: 425 LGYPFVIIAGKRALDEPAHFEVRCQNTGEVVFLTREGVLELLSQ 468


>gi|16078720|ref|NP_389539.1| prolyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168]
 gi|221309535|ref|ZP_03591382.1| prolyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168]
 gi|221313859|ref|ZP_03595664.1| prolyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. NCIB
           3610]
 gi|221318782|ref|ZP_03600076.1| prolyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           JH642]
 gi|221323054|ref|ZP_03604348.1| prolyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. SMY]
 gi|321315424|ref|YP_004207711.1| prolyl-tRNA synthetase [Bacillus subtilis BSn5]
 gi|11134893|sp|O31755|SYP_BACSU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|2634029|emb|CAB13530.1| prolyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168]
 gi|291484212|dbj|BAI85287.1| prolyl-tRNA synthetase [Bacillus subtilis subsp. natto BEST195]
 gi|320021698|gb|ADV96684.1| prolyl-tRNA synthetase [Bacillus subtilis BSn5]
          Length = 564

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 47/203 (23%), Positives = 87/203 (42%), Gaps = 11/203 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E + H+ L R      I ++ SGV  +    +K+ Q +   +R +++  D  E+  P 
Sbjct: 17  DAEAKSHQLLLRAG---FIRQNTSGVYSYMPLAYKVIQNIQQIVREEMEKIDAVEMLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +     WQ+SG W +Y   +  +K      +  R FAL   +     ++    +KSY+ L
Sbjct: 74  LQQAETWQESGRWYTYGPELMRLKD-----RHGREFALGATHEEVITSLVRDEVKSYKRL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKD 417
           P+ L +  S +R+E      GL+R R F   DA+ F  + E +     K++    +I+  
Sbjct: 129 PLTLYQIQSKFRDEKRPRF-GLLRGREFIMKDAYSFHASAESLDETYQKMYEAYSNIFAR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDAL 440
            G     V   +       +   
Sbjct: 188 CGINVRPVIADSGAMGGKDTHEF 210



 Score = 78.7 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 57/153 (37%), Gaps = 8/153 (5%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI- 556
           +        NA Y++ +  +  P+++     G       I  ++      +W   +    
Sbjct: 414 LGTRYSEAMNATYLDENG-RAQPMLMGCYGIGVSRTLSAIAEQHHDEKGLIWPKSVAPYD 472

Query: 557 -----VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
                +        E A+++   LK+    +  D R E    K  +  +  +PI I  G 
Sbjct: 473 LHILALNMKNDGQRELAEKLYADLKAEGYEVLYDDRAERAGVKFADSDLIGLPIRITVGK 532

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           + A E  + ++   +  + ++S+ +    ++K+
Sbjct: 533 R-ADEGIVEVKIRQTGESTEISVDELSAFISKQ 564


>gi|332247927|ref|XP_003273115.1| PREDICTED: probable prolyl-tRNA synthetase, mitochondrial [Nomascus
           leucogenys]
          Length = 475

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 64/383 (16%), Positives = 129/383 (33%), Gaps = 43/383 (11%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I     G         +  + L+  + ++++    +++N P +    LWQ +  WD    
Sbjct: 80  IYPASPGCYHLLPYTVRAMEKLVRVIDQEMQAIGGQKVNMPSLSPAELWQATNRWDLMGK 139

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPSG 375
            +  ++      +  + + L P +     A+     K SY++LP  L +    +R+EP  
Sbjct: 140 ELLRLRD-----RHGKEYCLGPTHEEAITALIASQKKLSYKQLPFLLYQVTRKFRDEPRP 194

Query: 376 SLHGLMRVRGFTQDDAHVFCT-KEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              GL+R R F   D + F +  E        + +   S++   G   + V+        
Sbjct: 195 RF-GLLRGREFYMKDMYTFDSSPEAAQQTYSLVCDAYCSLFNRLGLPFVKVQADVGTIGG 253

Query: 435 VGSDALW---DDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDW 491
             S       D  E+ +        +++ + ++               +       G   
Sbjct: 254 TVSHEFQLPVDIGEDRLAICPRCSFSANMETLDFS-------------QMNCPACQGPLT 300

Query: 492 QCGTIQVDFNLP---SRFNAFYVNSHSEKCHPVMIHRAVFG-SIERFIGIMIENFKG--- 544
           +   I+V           + F     +    P +     +G  + R +   IE       
Sbjct: 301 KTKGIEVGHTFYLGTKYSSIFNAQFTNVYGKPTLAEMGCYGLGVTRILAAAIEVLSTEDC 360

Query: 545 -NLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSH--------HLSIETDFRNE-TINY 593
              P  L+P QA +      +  E A E+   L  H        H  +  D R   TI  
Sbjct: 361 VRWPSLLAPYQACLIPPKKGSKEEAASELIGQLYDHITEAVPQLHGEVLLDDRTHLTIGN 420

Query: 594 KIREHSIKKIPIIIICGDKEASE 616
           ++++ +    P +II G +   +
Sbjct: 421 RLKDANKFGYPFVIIAGKRALED 443


>gi|304383408|ref|ZP_07365874.1| phosphoribulokinase [Prevotella marshii DSM 16973]
 gi|304335576|gb|EFM01840.1| phosphoribulokinase [Prevotella marshii DSM 16973]
          Length = 554

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 49/242 (20%), Positives = 96/242 (39%), Gaps = 3/242 (1%)

Query: 1   MPSDIKLTFPDGSI-KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-S 58
           M   +++   +     N  + +T SDV +     +    V+  +N KV  +   V     
Sbjct: 2   MKQTVQIRCKNNKKTLNVAIGSTLSDVFQFTRLEMKHGPVSAKVNNKVEGMHYRVYRNKD 61

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           IE +    P  L     +   ++ +AV  ++   +V I   + +G+Y + +   P +  +
Sbjct: 62  IEFLDLTSPSGLRTYTRTLFLVLCKAVHDLYSGSEVVIDIPVSNGYYCNLNLGHPVTDVD 121

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
             +I ++MQEI+    P  +   + E+A  +FE+  +  KV++L SI A      Y    
Sbjct: 122 ADKIRRRMQEIVDAHLPLRRHETTTEEAIRMFETVGDMPKVKLLRSIGAL-YTAYYDLDG 180

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D   G  + +T Q++ F       G   R  S             +   E+ Q  +  
Sbjct: 181 YKDYYYGSMLTNTSQLRLFGLERYYDGLLLRIPSADDPSRLGDIIRQDKMFEIFQEHHRW 240

Query: 239 EE 240
           + 
Sbjct: 241 QN 242


>gi|166713436|ref|ZP_02244643.1| prolyl-tRNA synthetase [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 564

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 44/241 (18%), Positives = 90/241 (37%), Gaps = 11/241 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  L        ++E   HR + R   +  +A   SG+  W   G ++ + + + +R +
Sbjct: 4   SQFHLHTTKETPADAELVSHRLMLRAGMIRKLA---SGLYTWSPLGLRVLRKVEAIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P +  + LW  +G W+ +   +  +K   +     + F   P       
Sbjct: 61  MNRAGAVEVLFPTIQPRELWDATGRWEKFGGQLLKIKDRKE-----QEFCYSPTAEEAAA 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNEC 404
                 + SY++LP+   +  + +R+E      G+MR R F   DA+ F  T   M  E 
Sbjct: 116 EFARQEINSYKQLPLNFYQIQTKFRDEIRPRF-GVMRAREFLMKDAYSFHLTDADMAREY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
             +      I+   G +   V+  +       S      A++    +  +  +     + 
Sbjct: 175 DNMRAAYTRIFTRLGLDFRAVQADSGAIGGDASQEFHVIADSGEDSLAFSTGSDYAANVE 234

Query: 465 T 465
           T
Sbjct: 235 T 235



 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 54/163 (33%), Gaps = 13/163 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGN 545
           R  + G + Q+         A  ++   +     ++    +G  I R +   IE N    
Sbjct: 403 RGIEVGHVFQLGSQYAQALQATVIDEGGKV---AVMKMGCYGIGISRIVAAAIEQNHDDA 459

Query: 546 LPLW---LSPIQAIVTTITSSA----VEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
             +W   ++P Q +V  I        V  AQ + + L +  L    D R         + 
Sbjct: 460 GIIWPAPMAPWQVVVCVINPKQDAQVVSAAQALLDELIAAGLDAALDDRGLRPGAMFADM 519

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            +  IP  ++  ++  +  +   R   +   + +        L
Sbjct: 520 ELLGIPHRVVVSERGLAAGTFEYRARTAAAAENLDKAGLFSCL 562


>gi|88807669|ref|ZP_01123181.1| prolyl-tRNA synthetase [Synechococcus sp. WH 7805]
 gi|88788883|gb|EAR20038.1| prolyl-tRNA synthetase [Synechococcus sp. WH 7805]
          Length = 598

 Score =  131 bits (329), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 50/209 (23%), Positives = 86/209 (41%), Gaps = 8/209 (3%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +  I   G+G+  +    W++ + + + +R ++      E   PQ
Sbjct: 17  DAEIPSHQLLVRGGYIRRI---GAGIYAYLPMMWRVLRKINAIVRDELDSLGALETLLPQ 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW++SG W  Y A    +   +D  +  R   L P +      +    L+SYR+L
Sbjct: 74  LQPADLWERSGRWQGYTAGEGIMFHLED--RQNRQLGLGPTHEEVITELAGDLLRSYRQL 131

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKD 417
           PV L +  + +R+E      GLMR R F   DA+ F    + +      +      I+K 
Sbjct: 132 PVTLYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSFHANQDDLEGTYQAMAAAYARIFKR 190

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
            G E + V   +       S      AE 
Sbjct: 191 CGLEAVAVDADSGAIGGAASQEYMVTAEA 219



 Score = 73.7 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 25/162 (15%), Positives = 57/162 (35%), Gaps = 9/162 (5%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I Q+        +A + NS  ++   +++     G        + ++      
Sbjct: 429 RGIEVGHIFQLGRKYSEALDARFTNSAGQQE-ALLMGCYGIGISRLAQAAVEQHHDDAGI 487

Query: 548 LWL---SPIQAIVT---TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            W    +P Q IV       S+ V   + +        +    D R+E    K ++  + 
Sbjct: 488 CWPVGIAPFQVIVVIAKMKDSNQVALGEGLYQSFLDAGIDALLDDRDERAGVKFKDADLI 547

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            IP  I+ G ++A +  + +    +  +  +    A   + +
Sbjct: 548 GIPWRIVVG-RDAGDGEVEVVERSACKSTTMDHQKAYRQVKE 588


>gi|31794022|ref|NP_856515.1| prolyl-tRNA synthetase [Mycobacterium bovis AF2122/97]
 gi|121638725|ref|YP_978949.1| prolyl-tRNA synthetase [Mycobacterium bovis BCG str. Pasteur
           1173P2]
 gi|224991217|ref|YP_002645906.1| prolyl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|81834897|sp|Q7TXQ5|SYP_MYCBO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|152112932|sp|A1KMI8|SYP_MYCBP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|31619616|emb|CAD95055.1| PUTATIVE PROLYL-TRNA SYNTHETASE PROS (PROLINE--TRNA LIGASE) (PRORS)
           (GLOBAL RNA SYNTHESIS FACTOR) (PROLINE TRANSLASE)
           [Mycobacterium bovis AF2122/97]
 gi|121494373|emb|CAL72854.1| Putative prolyl-tRNA synthetase proS [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|224774332|dbj|BAH27138.1| prolyl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo 172]
          Length = 582

 Score =  131 bits (329), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 51/362 (14%), Positives = 120/362 (33%), Gaps = 30/362 (8%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +  +A    G+  W   G ++ + +   +R ++     +EI  P 
Sbjct: 19  DAEVASHKLLIRAGYIRPVA---PGLYSWLPLGLRVLRNIERVIRDEMNAIGGQEILFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++ +  W  Y  ++F +K      +    + L P +             SY++ 
Sbjct: 76  LLPRAPYETTNRWTQYGDSVFRLKD-----RRGNDYLLGPTHEELFTLTVKGEYSSYKDF 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKD 417
           P+ L +  + YR+E      G++R R F   D++ F           + H      I+  
Sbjct: 131 PLTLYQIQTKYRDEARPR-AGILRAREFVMKDSYSFDIDAAGLKAAYRAHREAYQRIFDR 189

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
                ++V   +       S+    ++ +     +  +++     +   V          
Sbjct: 190 LQVRYVIVSAVSGAMGGSASEEFLAESPSGEDAFVRCLESGYTANVEAVVTARP---DTL 246

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
             + + +  +       TI       +  +     + ++    V+I     G     + I
Sbjct: 247 PIDGLPEAVVHDTGDTPTIASLVAWANEADLGRTVTAADTLKNVLIKVRQPGGDTELLAI 306

Query: 538 MI----ENFKGNLPLWLSPIQAIVTTITSSAVEYAQE---IA-----NLLKSHHLSIETD 585
            +    E     L   L P             ++A+    +        L+ +++    D
Sbjct: 307 GVPGDREVDDKRLGAALEPA----DYALLDDDDFAKHPFLVKGYIGPKALRENNVRYLVD 362

Query: 586 FR 587
            R
Sbjct: 363 PR 364



 Score = 64.8 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 24/151 (15%), Positives = 53/151 (35%), Gaps = 10/151 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG--- 544
           R  + G I Q+       F A  +    +     M    +   + R + ++ E       
Sbjct: 419 RGIEIGHIFQLGSKYTDAFTADVLGEDGKPVRLTMGSYGI--GVSRLVAVVAEQHHDELG 476

Query: 545 -NLPLWLSPIQAIVTTITSSAVEYAQEIANL--LKSHHLSIETDFRNETINYKIREHSIK 601
              P  ++P    +      A   A   A    L    + +  D R  +   K ++  + 
Sbjct: 477 LRWPSTVAPFDVHLVIANKDAQARAGATALAADLDRLGVEVLLDDRQASPGVKFKDAELL 536

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
            +P I++ G +  ++  + +R   S  T+++
Sbjct: 537 GMPWIVVVG-RGWADGVVELRDRFSGQTREL 566


>gi|296110429|ref|YP_003620810.1| prolyl-tRNA synthetase [Leuconostoc kimchii IMSNU 11154]
 gi|295831960|gb|ADG39841.1| prolyl-tRNA synthetase [Leuconostoc kimchii IMSNU 11154]
          Length = 571

 Score =  131 bits (329), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 44/216 (20%), Positives = 89/216 (41%), Gaps = 11/216 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++E + H+ L +   +  +A    G+  +     ++   +   +R +
Sbjct: 4   SKLLMPTLREVPADAEVKSHQLLLKAGFIRPVAA---GMFSYLPLAKRVLNKIEQIIREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           + + D  E+  P+VL   LWQ+SG + +Y  +++  K   D     R F L P +   + 
Sbjct: 61  MANIDANEMLVPEVLPAELWQKSGRYATYGPDLYKFKNRQD-----RDFILGPTHEETYT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +    +KSY++LP+ + +    +R+E      GL+R R F   DA+ F    E +    
Sbjct: 116 QLMADEIKSYKKLPLTVYQIQPKFRDENRPRF-GLLRTREFIMKDAYSFSADQEGLDQTF 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
             + N  I+I+   G     +           S   
Sbjct: 175 HAMENAYINIFDRIGISYRAIVGDAGAMGGSDSKEF 210



 Score = 70.2 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 58/161 (36%), Gaps = 9/161 (5%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN--- 545
           +  + G I       S+     V   + +   +++     G   R +  + E    +   
Sbjct: 406 KGIEIGHIFKLGTRYSKAMGAQVLDENGRQTDMIMGSYGIGVS-RLLSAIAEQKADDLGL 464

Query: 546 -LPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             P  ++P    +  +          A ++  LL +  L +  D R E    K  +  + 
Sbjct: 465 VWPASIAPFDVHIVPVNMKDDEQSRVANQLETLLMAQGLEVLVDDRKERAGVKFADADLI 524

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +PI I  G K A E  + ++   S T  ++ + + +  ++
Sbjct: 525 GLPIRITVGKK-AGEDIVEVKVRASNTNIEMRMSEVVDSVS 564


>gi|315124065|ref|YP_004066069.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|315017787|gb|ADT65880.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
          Length = 508

 Score =  131 bits (329), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 43/229 (18%), Positives = 92/229 (40%), Gaps = 11/229 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            T+          +++    H  L R      + + GSG+  +   G ++   + + ++ 
Sbjct: 3   FTKFYAPSLKEAPKDASLPSHIFLTRAG---FVEQIGSGLYNFLPLGKRVLDKIKNIVKE 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +E+N   +    LWQ+SG ++ +   +   K   +       F L P +    
Sbjct: 60  EMDKAGAQEVNLSFITPASLWQESGRYNVFGKELLRFKDRKEN-----EFVLGPTHEEAM 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           +++  + + SY++LP+ L + G  +R+E      GL+R R F   D + F   E+     
Sbjct: 115 LSLVKNKITSYKQLPLHLYQIGLKFRDEARPRF-GLLRCREFLMKDGYSFHANEEDLGRE 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
            + ++     I +  G +   V+  +      GS      A+N    +L
Sbjct: 174 FELMYKTYSQILQRMGLDFRAVEADSGAIGGSGSKEFMVLAKNGEDDIL 222


>gi|312143669|ref|YP_003995115.1| prolyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
 gi|311904320|gb|ADQ14761.1| prolyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
          Length = 568

 Score =  131 bits (329), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 39/230 (16%), Positives = 86/230 (37%), Gaps = 11/230 (4%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
             H+ + R   +       +G+  +   G+++ + + +  R+ +     +E+  P +   
Sbjct: 21  TSHKLMLRAGLMR---NHSAGIYSYLPLGYRVIKKIENITRKHMDASGAQEVLLPILQTA 77

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            +W+ S  WD +   M  ++   D     R + L P +      +    ++SY++LP+ L
Sbjct: 78  QIWKDSKRWDKFGPLMMRLRDRKD-----REYCLGPTHEEVVTDLIKDEIRSYKDLPLNL 132

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFE 421
            +  +  R+E      G+MR R F   DA+      E +      +++     + + G +
Sbjct: 133 YQIQTKVRDEIRPRF-GVMRGREFIMKDAYSLDIDYEGLDKSYQAMYDAYEKTFAECGLD 191

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
            + V+  T       S      A++    V           +   V   E
Sbjct: 192 AVAVEADTGAMGGKDSHEFMVLADSGEDQVAFCDSCGYAANVERAVANKE 241



 Score = 77.5 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 25/146 (17%), Positives = 53/146 (36%), Gaps = 8/146 (5%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPI 553
           +         A Y++ +  +  P+++     G I R +   IE          P  ++P 
Sbjct: 413 LGTKYSENMGANYLDENG-RTQPIVMGSYGIG-ITRLVAAAIEQNNDEYGIIWPKAIAPY 470

Query: 554 QAIVTTITSS--AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
           Q I+  + +     E ++EI   L++    +  D R E    K  +  +  IP+ +  G 
Sbjct: 471 QIIILALGNDEAVAEKSEEIYQELEAEGWEVLLDDRKERAGVKFNDSELIGIPLRLTIGS 530

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDA 637
           +      I      +    K+ + + 
Sbjct: 531 RSLENGEIEAMIRENNQKSKIKIDNL 556


>gi|326791435|ref|YP_004309256.1| phosphoribulokinase/uridine kinase [Clostridium lentocellum DSM
           5427]
 gi|326542199|gb|ADZ84058.1| phosphoribulokinase/uridine kinase [Clostridium lentocellum DSM
           5427]
          Length = 552

 Score =  131 bits (329), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 43/242 (17%), Positives = 91/242 (37%), Gaps = 3/242 (1%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG--S 58
           M   +++ F DG         T  ++AE +        +         +L+ P+     +
Sbjct: 1   MSKMVRILFKDGKEIQVEKGTTFEELAEKVKGQGEYPIMLAETENSYKELASPILHDLSA 60

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           +  I   +   + V + S   ++  A + I+P   + +   I  G++ +F  +   S + 
Sbjct: 61  VRFIYLNEKDGMRVYQRSATFLLVAAAKRIFPGRHIIVNHHIAGGYFCEFKDDGLCSDEN 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           + ++E+ M +++  + P  K+ LS E+A ELFE++    K E L        V +YR  E
Sbjct: 121 IQKLEEMMWQMVREELPIRKEVLSVEQAMELFEAEGMLDKKE-LFKYRRTSTVNIYRLDE 179

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             D   G  + +T  ++ F  +    G   +    +                + +     
Sbjct: 180 AKDYFYGYMLTNTKAIQLFKLIPYAHGFILQFPDEKDPSHLKTFVPQPKLSNIFRESERW 239

Query: 239 EE 240
             
Sbjct: 240 AR 241


>gi|168185537|ref|ZP_02620172.1| phosphoribulokinase family protein [Clostridium botulinum C str.
           Eklund]
 gi|169296471|gb|EDS78604.1| phosphoribulokinase family protein [Clostridium botulinum C str.
           Eklund]
          Length = 552

 Score =  131 bits (329), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 52/238 (21%), Positives = 100/238 (42%), Gaps = 2/238 (0%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
           +I +TF +             ++++       K  +    NGK+ +L+  V  +G+ EI+
Sbjct: 3   NINITFKNNKKICVSKGTNLYEISKIADEVGDKTPILAWFNGKIYELNHKVYEDGNFEIV 62

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
            P+   S+     +   I+ ++V+ ++P  +V I   +  G + +  K  P + +++  I
Sbjct: 63  DPKRKISVLAYMRTLQFILIKSVKDLYPGAKVRIEHSLSKGIFGEVSKNTPLTKEDVKDI 122

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           + +MQ+II ++    K  +S EKA E+F+      K+ +   +  K NVTLY     +D 
Sbjct: 123 KNRMQQIIDKNIVINKLSVSKEKAIEIFKEYDMDAKLRMFAHVDNK-NVTLYELDGMYDY 181

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
             G    STG VK F  +    G   RG +                 ++        +
Sbjct: 182 FYGSMAYSTGHVKLFDLMYYEPGFILRGPTIDNCDKLPEFIEQKKLAKIFYESEKWAQ 239


>gi|300173485|ref|YP_003772651.1| prolyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811]
 gi|299887864|emb|CBL91832.1| Prolyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811]
          Length = 571

 Score =  131 bits (329), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 50/272 (18%), Positives = 105/272 (38%), Gaps = 26/272 (9%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++E + H+ L +   +  +A    G+  +     ++   + + +R +
Sbjct: 4   SKLLMPTLREIPADAEVKSHQLLLKAGFIRPVAA---GMFSYLPMAKRVLNKIENIIREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +   D  E+  P++L   LW++SG +++Y   ++  K   D     R F L P +     
Sbjct: 61  MNAIDANEMLVPEILPAELWEKSGRYETYGPALYKFKNRQD-----RDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            + +  +KSY++LP+ + +    +R+E      GL+R R F   DA+ F   +   ++  
Sbjct: 116 QLMSDDIKSYKKLPLVVYQIQPKFRDENRPRF-GLLRTREFIMKDAYSFSADQAGLDQA- 173

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
             HN+  +  K F    +  +        +G     + +             + +D I  
Sbjct: 174 -FHNMETAYIKIFDRIGLSYRAIVGDAGAMGGSDSKEFS---------APAAAGEDIIAY 223

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ 497
                +   Y    E   KD   R  Q    Q
Sbjct: 224 ----SDATDYAANLEMA-KDFYERQNQTAEAQ 250



 Score = 68.7 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 27/152 (17%), Positives = 58/152 (38%), Gaps = 10/152 (6%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPI 553
           +         A  +N +  +   +M    +   + R +  ++E          P  ++P 
Sbjct: 416 LGTRYSKVLGAQVLNENGRQTDMIMGSYGI--GVSRLLSAIVEQKADADGLIWPANVAPF 473

Query: 554 QAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
              +  +    +  V  A ++  LL +  L +  D R E    K  +  +  +PI I  G
Sbjct: 474 DVHIVPVNIKDADQVRVAGQLETLLTTQGLEVLVDDRKERAGVKFADADLIGLPIRITVG 533

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            K ASE  + ++   S T  ++ L + +  ++
Sbjct: 534 KK-ASEDIVEVKVRASNTNIEMRLSEVVDSVS 564


>gi|124088770|ref|XP_001347228.1| Prolyl-tRNA synthetase [Paramecium tetraurelia strain d4-2]
 gi|145474039|ref|XP_001423042.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|50057617|emb|CAH03601.1| Prolyl-tRNA synthetase, putative [Paramecium tetraurelia]
 gi|124390102|emb|CAK55644.1| unnamed protein product [Paramecium tetraurelia]
          Length = 652

 Score =  131 bits (329), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 71/424 (16%), Positives = 142/424 (33%), Gaps = 56/424 (13%)

Query: 228 QQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI 287
           Q   T  +   +      ++++ R+ +L     D SG        + I++ +   +   I
Sbjct: 152 QNLQTLAITVKKSDFSEWYQQVIRKAELIEY-YDVSGCYILRPWAYFIWEQIQRLLDDLI 210

Query: 288 K-DDYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           + +D E    P  L       +  H + ++A +  V     +       A++P +     
Sbjct: 211 RTEDVENTYFPMFLSAKHLNTEKDHVEGFKAEVAWVTKYGQSDL-NEPLAIRPTSETIMY 269

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNEC 404
             F   ++S+R+LP+++ ++ ++ R E        +R R F   + H    T+E+   + 
Sbjct: 270 PAFAKWVQSHRDLPLKVNQWTNIVRWEFKFPT-PFIRTREFLWQEGHTAHSTREEAVKQV 328

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
             I +    +Y +     ++  + T  EK  G D                          
Sbjct: 329 YTILDFYEQVYGELLAVPVIKGIKTESEKFAGGD-------------------------- 362

Query: 465 TGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIH 524
                     +    E I+    GR  Q  T        S+   F +N   +K       
Sbjct: 363 ----------FTTTVETIIP-QNGRGLQGATSHHLGQNFSK--MFEINFEDDKRQKAFAW 409

Query: 525 RAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA----------VEYAQEIANL 574
           +  +G   R IG MI     +  L L P  A    I               E  ++I  +
Sbjct: 410 QTSWGFTTRSIGAMIMFHGDDNGLVLPPRIAKYQIIIIPIIHKDLDEKQLNERCEQIRQI 469

Query: 575 LKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
           L    L +  D R+  +  +K  +   K +PI +  G  E     + + +       ++ 
Sbjct: 470 LIKQKLRVHFDNRDNYSPGWKFNKWEQKGVPIRLEIGPGEFKNNEVRVVQRFDNKKYQIK 529

Query: 634 LLDA 637
           + + 
Sbjct: 530 IEEL 533


>gi|122879049|ref|YP_199448.6| prolyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|162319805|ref|YP_449766.2| prolyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|188578630|ref|YP_001915559.1| prolyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|114152279|sp|Q2P7I5|SYP_XANOM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|114152280|sp|Q5H4Q7|SYP_XANOR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226701357|sp|B2SPG9|SYP_XANOP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|188523082|gb|ACD61027.1| prolyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 564

 Score =  131 bits (329), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 44/241 (18%), Positives = 90/241 (37%), Gaps = 11/241 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  L        ++E   HR + R   +  +A   SG+  W   G ++ + + + +R +
Sbjct: 4   SQFHLHTTKETPADAELVSHRLMLRAGMIRKLA---SGLYTWSPLGLRVLRKVEAIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P +  + LW  +G W+ +   +  +K   +     + F   P       
Sbjct: 61  MDRAGAVEVLFPTIQPRELWDATGRWEKFGGQLLKIKDRKE-----QEFCYSPTAEEAAA 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNEC 404
                 + SY++LP+   +  + +R+E      G+MR R F   DA+ F  T   M  E 
Sbjct: 116 EFARQEINSYKQLPLNFYQIQTKFRDEIRPRF-GVMRAREFLMKDAYSFHLTDADMAREY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
             +      I+   G +   V+  +       S      A++    +  +  +     + 
Sbjct: 175 DNMRAAYTRIFTRLGLDFRAVQADSGAIGGDASQEFHVIADSGEDSLAFSTGSDYAANVE 234

Query: 465 T 465
           T
Sbjct: 235 T 235



 Score = 74.8 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 54/163 (33%), Gaps = 13/163 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGN 545
           R  + G + Q+         A  ++   +     ++    +G  I R +   IE N    
Sbjct: 403 RGIEVGHVFQLGSQYAQALQATVIDEGGKV---AVMKMGCYGIGISRIVAAAIEQNHDDA 459

Query: 546 LPLW---LSPIQAIVTTITSSA----VEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
             +W   ++P Q +V  I        V  AQ + + L +  L    D R         + 
Sbjct: 460 GIIWPAPMAPWQVVVCVINPKQDAQVVSAAQALLDELIAAGLDAALDDRGLRPGAMFADM 519

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            +  IP  ++  ++  +  +   R   +   + +        L
Sbjct: 520 ELLGIPHRVVVSERGLAAGTFEYRARTAAAAENLDKAGLFSRL 562


>gi|84366334|dbj|BAE67492.1| prolyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF 311018]
          Length = 583

 Score =  131 bits (329), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 44/241 (18%), Positives = 90/241 (37%), Gaps = 11/241 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  L        ++E   HR + R   +  +A   SG+  W   G ++ + + + +R +
Sbjct: 23  SQFHLHTTKETPADAELVSHRLMLRAGMIRKLA---SGLYTWSPLGLRVLRKVEAIVREE 79

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P +  + LW  +G W+ +   +  +K   +     + F   P       
Sbjct: 80  MDRAGAVEVLFPTIQPRELWDATGRWEKFGGQLLKIKDRKE-----QEFCYSPTAEEAAA 134

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNEC 404
                 + SY++LP+   +  + +R+E      G+MR R F   DA+ F  T   M  E 
Sbjct: 135 EFARQEINSYKQLPLNFYQIQTKFRDEIRPRF-GVMRAREFLMKDAYSFHLTDADMAREY 193

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
             +      I+   G +   V+  +       S      A++    +  +  +     + 
Sbjct: 194 DNMRAAYTRIFTRLGLDFRAVQADSGAIGGDASQEFHVIADSGEDSLAFSTGSDYAANVE 253

Query: 465 T 465
           T
Sbjct: 254 T 254



 Score = 74.8 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 54/163 (33%), Gaps = 13/163 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGN 545
           R  + G + Q+         A  ++   +     ++    +G  I R +   IE N    
Sbjct: 422 RGIEVGHVFQLGSQYAQALQATVIDEGGKV---AVMKMGCYGIGISRIVAAAIEQNHDDA 478

Query: 546 LPLW---LSPIQAIVTTITSSA----VEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
             +W   ++P Q +V  I        V  AQ + + L +  L    D R         + 
Sbjct: 479 GIIWPAPMAPWQVVVCVINPKQDAQVVSAAQALLDELIAAGLDAALDDRGLRPGAMFADM 538

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            +  IP  ++  ++  +  +   R   +   + +        L
Sbjct: 539 ELLGIPHRVVVSERGLAAGTFEYRARTAAAAENLDKAGLFSRL 581


>gi|220931918|ref|YP_002508826.1| uridine kinase [Halothermothrix orenii H 168]
 gi|219993228|gb|ACL69831.1| uridine kinase [Halothermothrix orenii H 168]
          Length = 549

 Score =  131 bits (329), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 38/232 (16%), Positives = 92/232 (39%), Gaps = 2/232 (0%)

Query: 16  NFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPEDPRSLAVIR 74
           +F    T  +V +       ++ V   +N +V  L+  +     +  +T  D     + R
Sbjct: 12  SFDKGITVEEVVKETYNGNYREVVGAIVNNEVESLNYKLNNRSQVSFLTINDESGNRIYR 71

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDS 134
            S   ++   +  ++P  +++I   + +G Y + +K  P +  +L +I+K+M+E++ +D 
Sbjct: 72  RSLFFLLTRVIYYLYPGAKLSIEHSLGNGIYCELNKNTPITQSDLIKIKKRMEELVRKDL 131

Query: 135 PFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQV 194
           P  K  ++ +K  +++  +    KV++++ +   +   +Y    +++      V STG +
Sbjct: 132 PINKIKVNKDKLEKIYTEQDFYDKVKLVKQLDISQ-WPVYELDGFYNYFYSILVPSTGYL 190

Query: 195 KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDH 246
            KF    K+ G                         +        E     +
Sbjct: 191 DKFDIHFKMPGFILLYPFPGSNKEVSRYVEQPKLASIFYEYEKWGEIINVSN 242


>gi|289548806|ref|YP_003473794.1| prolyl-tRNA synthetase [Thermocrinis albus DSM 14484]
 gi|289182423|gb|ADC89667.1| prolyl-tRNA synthetase [Thermocrinis albus DSM 14484]
          Length = 570

 Score =  131 bits (329), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 40/179 (22%), Positives = 74/179 (41%), Gaps = 10/179 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           + E   H+ L +   +  IA   SGV  +     ++ + + S +R+++     +E+    
Sbjct: 17  DVEAPSHKYLVKGGFIKQIA---SGVYQYTPPALRVLRKIESIVRKEMDRTGAQEVLLTV 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW+++G WD Y   +F +K      +  R + L P +      +F   + SYR+L
Sbjct: 74  LNPAELWRETGRWDLYGRELFTLKD-----RHGRDYCLGPTHEEEVTDLFRSYVTSYRQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           P+ L +    +R+E      GL+R R F   DA+ F   E       +           
Sbjct: 129 PLILYQIQVKFRDEKRPRF-GLIRAREFIMKDAYSFDLDEFSAIMSYEAMKFAYDRIFK 186



 Score = 94.8 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 34/223 (15%), Positives = 75/223 (33%), Gaps = 23/223 (10%)

Query: 440 LWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY-ILKDA-----------I 487
           LWD++   +K ++  I       +N     G    YG   +   +++            +
Sbjct: 345 LWDNSLYGVKNMVVAINEPDVHYVNA--NPGRDFHYGDMVDVCQVEEGDPCPKCGAPLKV 402

Query: 488 GRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNL 546
            R  + G I +          AF  +S   K  PV++     G       I+ ++     
Sbjct: 403 NRGLEVGHIFLLGTRYSEPMKAFVKDSEG-KDVPVVMGCYGIGISRCMSAIVEQHHDEKG 461

Query: 547 PLWLSPIQ------AIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
             W +P+         V          A+++    +   + +  D R+E+   K  +  +
Sbjct: 462 IKWPTPVAPFELDIVCVNISDEEQRAVAEKLYTTAQEMGVEVLYDDRDESPGSKFADADL 521

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              P  I+ G K   E  + ++   +       + +A+  + +
Sbjct: 522 CGFPYRIVVGKK-VKEGKVEVQSRHTGERWDAPIEEAVGQVKE 563


>gi|58425026|gb|AAW74063.1| prolyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC10331]
          Length = 595

 Score =  131 bits (329), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 44/241 (18%), Positives = 90/241 (37%), Gaps = 11/241 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  L        ++E   HR + R   +  +A   SG+  W   G ++ + + + +R +
Sbjct: 35  SQFHLHTTKETPADAELVSHRLMLRAGMIRKLA---SGLYTWSPLGLRVLRKVEAIVREE 91

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P +  + LW  +G W+ +   +  +K   +     + F   P       
Sbjct: 92  MDRAGAVEVLFPTIQPRELWDATGRWEKFGGQLLKIKDRKE-----QEFCYSPTAEEAAA 146

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNEC 404
                 + SY++LP+   +  + +R+E      G+MR R F   DA+ F  T   M  E 
Sbjct: 147 EFARQEINSYKQLPLNFYQIQTKFRDEIRPRF-GVMRAREFLMKDAYSFHLTDADMAREY 205

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
             +      I+   G +   V+  +       S      A++    +  +  +     + 
Sbjct: 206 DNMRAAYTRIFTRLGLDFRAVQADSGAIGGDASQEFHVIADSGEDSLAFSTGSDYAANVE 265

Query: 465 T 465
           T
Sbjct: 266 T 266



 Score = 74.8 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 54/163 (33%), Gaps = 13/163 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGN 545
           R  + G + Q+         A  ++   +     ++    +G  I R +   IE N    
Sbjct: 434 RGIEVGHVFQLGSQYAQALQATVIDEGGKV---AVMKMGCYGIGISRIVAAAIEQNHDDA 490

Query: 546 LPLW---LSPIQAIVTTITSSA----VEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
             +W   ++P Q +V  I        V  AQ + + L +  L    D R         + 
Sbjct: 491 GIIWPAPMAPWQVVVCVINPKQDAQVVSAAQALLDELIAAGLDAALDDRGLRPGAMFADM 550

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            +  IP  ++  ++  +  +   R   +   + +        L
Sbjct: 551 ELLGIPHRVVVSERGLAAGTFEYRARTAAAAENLDKAGLFSRL 593


>gi|118617676|ref|YP_906008.1| prolyl-tRNA synthetase [Mycobacterium ulcerans Agy99]
 gi|152112934|sp|A0PQB8|SYP_MYCUA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|118569786|gb|ABL04537.1| prolyl-tRNA synthetase ProS [Mycobacterium ulcerans Agy99]
          Length = 582

 Score =  131 bits (329), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 52/359 (14%), Positives = 114/359 (31%), Gaps = 24/359 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +  +   G G+  W   G ++ + +   +R ++     +EI  P 
Sbjct: 19  DAEVPSHKLLIRAGYIRPV---GPGLYSWLPLGLRVLRNIERVIREEMNAIGGQEILFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++ +  W  Y   +F ++      +    + L P +             SY++ 
Sbjct: 76  LLPRAPYETTNRWTEYGDGVFRLED-----RRGNDYLLGPTHEELFTLTVKGEYNSYKDF 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKD 417
           P+ L +    YR+E      G++R R F   D++ F             H      I+  
Sbjct: 131 PLTLYQIQIKYRDEARPR-AGILRAREFVMKDSYSFDIDSGGLKAAYHAHREAYQRIFDR 189

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
                ++V   +       S+    ++       +  +++     +   V          
Sbjct: 190 LRVRYVIVSAVSGAMGGSASEEFLAESPVGEDTFVRCVESGYAANVEAVVTARPE---SL 246

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
             +      +    +  TI       +        S ++    V++     G     + I
Sbjct: 247 PIDGQPDAVVHDTGETPTIATLVAWANEAGLGREVSAADTLKNVLMKIRQPGGEWELLAI 306

Query: 538 MI----ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIA-----NLLKSHHLSIETDFR 587
            +    E  +  L   L P    V        +Y   +        L+S+ +    D R
Sbjct: 307 GVPGDREIDEKRLAAALDP-AEYVFLDDDDFGKYPFLVKGYIGPKALRSNDVRYLLDPR 364



 Score = 74.8 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 63/170 (37%), Gaps = 10/170 (5%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           P  +   +  + R  + G I Q+       F A  +    +     M    +   + R +
Sbjct: 407 PAPDGAGQLVMARGIEIGHIFQLGRKYTDAFTADVLGEDGKPVRLTMGSYGI--GVSRLV 464

Query: 536 GIMIENFKGN----LPLWLSPIQAIVTTITSSAVEYAQEI--ANLLKSHHLSIETDFRNE 589
            ++ E    N     P  ++P    +      A   A  I  A  L    + +  D R  
Sbjct: 465 AVIAEQHHDNLGLRWPAEIAPFGVHLVIANKDAEARAGAIGLAGELDGLGVEVLLDDRQA 524

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
           +   K ++  +  +P +++ G +  ++  + +R      T+++++ D++ 
Sbjct: 525 SPGVKFKDAELLGMPWVVVVG-RGWADGVVELRDRFGGQTRELTVGDSLA 573


>gi|309389227|gb|ADO77107.1| prolyl-tRNA synthetase [Halanaerobium praevalens DSM 2228]
          Length = 568

 Score =  131 bits (328), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 42/220 (19%), Positives = 89/220 (40%), Gaps = 11/220 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  L        E++   H+ + R   +    +  SG+  +   G+K+ + +    R+ 
Sbjct: 4   SKLYLPTLKEDPAEADVISHQLMLRAGMMR---KHASGIYSYLPLGYKVIKKIEKIARKH 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           + + + +E+  P + D  +W+ S  WD +   M       +     R F L P +     
Sbjct: 61  MDNSEAQEVLLPIMQDSQIWKDSKRWDKFGPLMIKFNDRKN-----REFCLGPTHEEVVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    ++SY++LP+ L +  +  R+E      G+MR R F   DA+         ++  
Sbjct: 116 DLVRDEVRSYKDLPLNLYQIQTKVRDEIRPRF-GVMRGREFIMKDAYSLDIDSAGLDKSY 174

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
           + +++    I+ + G E + V+  T       S      A
Sbjct: 175 QAMYDAYEKIFAECGLEAVSVEADTGAMGGKDSHEFMVLA 214



 Score = 81.8 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 56/168 (33%), Gaps = 8/168 (4%)

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
            PK E    D           ++        +A Y++ +  K  P+++     G I R +
Sbjct: 391 CPKCEKGKLDIKAGIEVGHIFKLGTKYSENMDANYLDENG-KAQPIVMGSYGIG-ITRLV 448

Query: 536 GIMIEN----FKGNLPLWLSPIQAIVTTIT--SSAVEYAQEIANLLKSHHLSIETDFRNE 589
              IE     +    P  ++P Q I+  +         ++ I   LK+    +  D R E
Sbjct: 449 AAAIEQNNDQYGIKWPKAIAPYQIIILPLGNDDEVQTKSEAIYQDLKAKGWEVLIDDRKE 508

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
               K  +  +  IP+ +  G +      +      +    ++ L   
Sbjct: 509 RAGVKFNDSELIGIPLRLTIGSRSLKNGVVEAMTRENNMKTEIELEQL 556


>gi|71892071|ref|YP_277801.1| prolyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus str.
           BPEN]
 gi|114152172|sp|Q493B4|SYP_BLOPB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|71796177|gb|AAZ40928.1| prolyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus str.
           BPEN]
          Length = 581

 Score =  131 bits (328), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 40/223 (17%), Positives = 84/223 (37%), Gaps = 11/223 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L       +  +   H+ + R   +  ++   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLATLKEAPKNCKAISHQLMLRAGLIRQVS---SGLYTWLPTGLRVLRKIENIIRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      EI  P V    LW++SG W  Y   +   K  ++     + F L P +    
Sbjct: 60  EMSKIGAIEIAMPIVQPARLWKKSGRWTGYGTELLRFKNRNN-----QEFVLGPTHEEMV 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +       Y++ P+ + +  + YR+E      G++R R F   D + F   ++     
Sbjct: 115 SEIICKETMLYKQFPLIVYQIHTKYRDEARPR-SGVIRAREFIMKDGYSFHINQKSLQNT 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
              ++    +I+   G    +V+          S      +EN
Sbjct: 174 YNNMYQTYHTIFNRIGLNFCVVQAEPGKIGGALSHEFQAYSEN 216



 Score = 71.4 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 62/168 (36%), Gaps = 10/168 (5%)

Query: 486 AIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           +I    + G I          +  Y   ++E  H + +    +G  I R I ++IE    
Sbjct: 409 SIHNCIEIGHIFQLGQKYLNLHTNYSQKNNEHKHNLSMEMGCYGIGITRIIAVIIEQNYD 468

Query: 545 N----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKS-HHLSIETDFRNETINYKI 595
                 P  ++P +  +  I    + +    A++I   L S   + I  D R E      
Sbjct: 469 KNGILWPDVIAPFKLAIIPIDMYRSVNVRNIAEKIYTQLLSVIGIDILIDDRKEYPGTMF 528

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +  +  IP I+I  D+  + + +  +       +K+ L   I  L +
Sbjct: 529 ADIDLIGIPHILIISDRSLANQEVEYKYRKKNKIEKIKLEMLIRYLIE 576


>gi|183981901|ref|YP_001850192.1| prolyl-tRNA synthetase ProS [Mycobacterium marinum M]
 gi|183175227|gb|ACC40337.1| prolyl-tRNA synthetase ProS [Mycobacterium marinum M]
          Length = 582

 Score =  131 bits (328), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 52/359 (14%), Positives = 114/359 (31%), Gaps = 24/359 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +  +   G G+  W   G ++ + +   +R ++     +EI  P 
Sbjct: 19  DAEVPSHKLLIRAGYIRPV---GPGLYSWLPLGLRVLRNIERVIREEMNAIGGQEILFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++ +  W  Y   +F ++      +    + L P +             SY++ 
Sbjct: 76  LLPRAPYETTNRWTEYGDGVFRLQD-----RRGNDYLLGPTHEELFTLTVKGEYNSYKDF 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKD 417
           P+ L +    YR+E      G++R R F   D++ F             H      I+  
Sbjct: 131 PLTLYQIQIKYRDEARPR-AGILRAREFVMKDSYSFDIDSGGLKAAYHAHREAYQRIFDR 189

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
                ++V   +       S+    ++       +  +++     +   V          
Sbjct: 190 LRVRYVIVSAVSGAMGGSASEEFLAESPVGEDTFVRCVESGYAANVEAVVTARPE---SL 246

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
             +      +    +  TI       +        S ++    V++     G     + I
Sbjct: 247 PIDGQPDAVVHDTGETPTIATLVAWANEAGLGREVSAADTLKNVLMKIRQPGGEWELLAI 306

Query: 538 MI----ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIA-----NLLKSHHLSIETDFR 587
            +    E  +  L   L P    V        +Y   +        L+S+ +    D R
Sbjct: 307 GVPGDREIDEKRLAAALDP-AEYVFLDDDDFGKYPFLVKGYIGPKALRSNDVRYLLDPR 364



 Score = 75.6 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 64/170 (37%), Gaps = 10/170 (5%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           P  +   +  + R  + G I Q+       F A  +    +     M    +   + R +
Sbjct: 407 PAPDGAGQLVMARGIEIGHIFQLGRKYTDAFTADVLGEDGKPVRLTMGSYGI--GVSRLV 464

Query: 536 GIMIENFKGN----LPLWLSPIQAIVTTITSSAVEYAQEI--ANLLKSHHLSIETDFRNE 589
            ++ E    N     P  ++P    +      A   A  I  A+ L    + +  D R  
Sbjct: 465 AVIAEQHHDNLGLRWPAEIAPFGVHLVIANKDAEARAGAIGLASELDGLGVEVLLDDRQA 524

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
           +   K ++  +  +P +++ G +  ++  + +R      T+++++ D++ 
Sbjct: 525 SPGVKFKDAELLGMPWVVVVG-RGWADGVVELRDRFGGQTRELTVGDSLA 573


>gi|297620635|ref|YP_003708772.1| Prolyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044]
 gi|297375936|gb|ADI37766.1| Prolyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044]
          Length = 507

 Score =  131 bits (328), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 76/452 (16%), Positives = 161/452 (35%), Gaps = 75/452 (16%)

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR 284
              ++E T      +E     ++++ +  D+   +     ++     G+ I++ + S + 
Sbjct: 1   MTQRREKTAITPTRQEDYPEWYQQVIKAADMAENSPVRGCMVI-KPWGFGIWENIKSTLD 59

Query: 285 RKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDL---------RT 333
           + IK+  +E +  P  +     + ++ H + +      V       KD            
Sbjct: 60  QMIKETGHENVYFPLFIPLSFLEKEAAHVEGFAKECAVVTHHRLEEKDGKLIPTGELEEP 119

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
             ++P +       F+  ++SYR+LP+ + ++ +V R E        +R   F   + H 
Sbjct: 120 LIVRPTSETIIGDSFSRWVESYRDLPLLINQWANVVRWEMRP--RIFLRTSEFLWQEGHT 177

Query: 394 FC-TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
              TK++   E LK+  +   +                             AE ++   +
Sbjct: 178 VHATKQEAKEETLKMLEVYRVL-----------------------------AEEVLAIPV 208

Query: 453 DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
              + S+ +R         GA      E +++D   +  Q GT        +R  A  + 
Sbjct: 209 ILGEKSAGERFP-------GAESTYTLEMMMQDR--KALQGGTSHYLGQNFAR--AQGIQ 257

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTIT------S 562
              ++      +   +G   R IG MI    ++    +P  ++P Q ++  +        
Sbjct: 258 FSGKEGELEYAYTTSWGVTTRLIGGMIMCHGDDDGLRIPPRVAPKQIVIIPVIPKPELEE 317

Query: 563 SAVEYAQEIANLLKSHHLS-----IETDFRNETINYKIREHSIKKIPIIIICGDKEASER 617
             + +A+++   + S         +  D R+     K  E   K +P+ I  G ++    
Sbjct: 318 EVLAFAEKVKQQIISQMFYGKPISVHIDKRDRRGGEKNWEWVKKGVPVRIEIGPRDIESD 377

Query: 618 SIGI--RRFGSTTTQKVSLLDA---IPILTKE 644
           S+ +  R  G    +KVSL      IP L  E
Sbjct: 378 SVMLARRDRGHKEKEKVSLETLGAIIPNLLNE 409


>gi|328957405|ref|YP_004374791.1| proline--tRNA ligase [Carnobacterium sp. 17-4]
 gi|328673729|gb|AEB29775.1| proline--tRNA ligase [Carnobacterium sp. 17-4]
          Length = 568

 Score =  131 bits (328), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 42/216 (19%), Positives = 87/216 (40%), Gaps = 11/216 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        E+E   H+ L R   +  I+   SGV  +     ++ + L + MR +
Sbjct: 4   SKLFIPTLRDVPNEAEVLSHKMLLRAGYIRQIS---SGVYSYLPLATRVLEKLKNIMREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +  +  E+  P +L + LW++SG +++Y  ++  ++      +  R + L P +     
Sbjct: 61  FEKINAVEMLMPSLLPRELWEESGRYETYGEDLMTLQD-----RHGRDYLLGPTHEEAFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +    + SY+ LP+ L +  + +R+E      GL+R R F   DA+ F    E +    
Sbjct: 116 TLIRDEITSYKRLPLSLYQIQTKFRDEKRPR-SGLLRGREFIMKDAYSFHDSFESLDATY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
                    I++  G +   +           S   
Sbjct: 175 QDFEKAYTRIFERCGLDFRNIIGDAGAMGGSNSKEF 210



 Score = 76.4 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 56/140 (40%), Gaps = 9/140 (6%)

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN----FKGNLPLWLSPIQAIVTTIT---S 562
            V  ++ +  PV++     G   R +  + E        N P  L+P +  +  +     
Sbjct: 425 TVLDNNGRSIPVVMGCYGIGVS-RLLSAITEQQSSEEGLNWPRHLAPYELHLIPVNMKAD 483

Query: 563 SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
             V  + E+   L++   S+  D RNE +  K ++  +  +PI I  G K A E  + ++
Sbjct: 484 DQVNLSNELYTSLQNAGFSVLLDDRNERVGVKFKDSDLIGMPIRITVGKK-AQENIVELK 542

Query: 623 RFGSTTTQKVSLLDAIPILT 642
              +    +V   + I  L 
Sbjct: 543 LRKTGEALEVRTEELIDTLN 562


>gi|255658001|ref|ZP_05403410.1| phosphoribulokinase family protein [Mitsuokella multacida DSM
           20544]
 gi|260850203|gb|EEX70210.1| phosphoribulokinase family protein [Mitsuokella multacida DSM
           20544]
          Length = 555

 Score =  131 bits (328), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 54/236 (22%), Positives = 97/236 (41%), Gaps = 3/236 (1%)

Query: 13  SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLA 71
             +N        D+A    +  A + VAV ++  + DL  PV +  SIE +  E      
Sbjct: 7   KERNVLPQVLPRDLAADYQQEYASRIVAVKLDNTLHDLQTPVGKSRSIEFVELESEEGWI 66

Query: 72  VIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQIEKKMQEII 130
           + R S   ++  AV  ++PE +VA      +G Y +     +  +      IE +M+ I+
Sbjct: 67  IYRRSVEFLLVMAVHELYPEAEVAAMFRANNGLYCEISVPGKKLTEAMAQAIEAEMRRIV 126

Query: 131 ARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRS 190
             D P +K+ L  E A +LF+  K+  K  ++ S+     V++YR G+++D   G  + S
Sbjct: 127 EEDRPIVKEVLEREAAVKLFKETKQVEKANLIASLKL-PKVSIYRCGDYYDYLYGAMIGS 185

Query: 191 TGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDH 246
           TG + KF   +  +G   R    +               E+           +  +
Sbjct: 186 TGHLGKFALDIFESGVLLRTPDLKSKGEVPPSVPQPKLSEVLTEAKNWANILRCRY 241


>gi|46202001|ref|ZP_00053978.2| COG0442: Prolyl-tRNA synthetase [Magnetospirillum magnetotacticum
           MS-1]
          Length = 500

 Score =  131 bits (328), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 72/442 (16%), Positives = 153/442 (34%), Gaps = 71/442 (16%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++ + T      EE+    ++++ +  D+   +     ++     G+ I++++   + R+
Sbjct: 2   SKAKKTAVTPTREENFPEWYQQVIKASDMAENSPVRGCMVI-KPWGYGIWESIQRDLDRR 60

Query: 287 IKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDL---------RTFA 335
           IK+  +E    P  +     + ++ H + +   M  V       +D              
Sbjct: 61  IKETGHENCYFPLFIPLSFLEKEAAHVEGFAKEMAVVTHHRLVAEDGKLVPSGKLEEPLV 120

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-F 394
           ++P +       F   ++SYR+LP+ + ++ +V R E        +R   F   + H   
Sbjct: 121 VRPTSETIIGDAFARWIQSYRDLPMLVNQWANVVRWEMRP--RIFLRTAEFLWQEGHTAH 178

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDT 454
            T E+   E L++  +   + ++     ++V      E+  G+D  +             
Sbjct: 179 ATAEEAMEETLRMLEVYRVMSEEVLAMPVIVGEKPAHERFPGADKTYS------------ 226

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH 514
                                    E +++D  G+  Q GT        S+  A  +   
Sbjct: 227 ------------------------IEAMMQD--GKALQAGTSHFLGQHFSK--AQNIRYQ 258

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTITSS------A 564
           + +          +G   R IG +I +   +    +P  ++P Q +   IT +       
Sbjct: 259 TAQGGEEFCFTTSWGVSTRLIGGVIMSHADDNGLRVPPRIAPKQIVFVPITRADGDEALI 318

Query: 565 VEYAQEIANLLKSH-----HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSI 619
            E+   +   L +       L +  D R      K  E   K  PII   G ++ +  +I
Sbjct: 319 DEFLAPVVKELSAQSFGGERLRVHVDRRPLAPPEKRWEWVKKGAPIICEVGPRDVAGGTI 378

Query: 620 G-IRRFGSTTTQKVSLLDAIPI 640
             IRR G    Q     + +  
Sbjct: 379 AMIRRDGELKGQITPKDEFVAR 400


>gi|154686074|ref|YP_001421235.1| prolyl-tRNA synthetase [Bacillus amyloliquefaciens FZB42]
 gi|166980099|sp|A7Z4S8|SYP_BACA2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|154351925|gb|ABS74004.1| ProS [Bacillus amyloliquefaciens FZB42]
          Length = 564

 Score =  131 bits (328), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 51/243 (20%), Positives = 98/243 (40%), Gaps = 25/243 (10%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E + H+ L R      I ++ SGV  +    +++ Q +   +R +++  +  E+  P 
Sbjct: 17  DAEAKSHKLLLRAG---FIRQNTSGVYSYMPLAYRVIQNIQKIVREEMEKINAVEMLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +     WQ+SG W +Y   +  +K      +  R FAL   +     ++    +KSY+ L
Sbjct: 74  LQQAETWQESGRWYTYGPELMRLKD-----RHGREFALGATHEEVITSLVRDEVKSYKRL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+ L +  S +R+E      GL+R R F   DA+ F   E+   E  +  N+  +    F
Sbjct: 129 PLTLYQIQSKFRDEKRPRF-GLLRGREFIMKDAYSFHASEESLEETYQ--NMYGAYSSIF 185

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
              ++ V+        +G     +         L  I   +       +   +G+ Y   
Sbjct: 186 ARCELNVRPVIADSGAMGGKDTHEFM------ALSEIGEDT-------IAYSDGSSYAAN 232

Query: 479 FEY 481
            E 
Sbjct: 233 TEM 235



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 21/151 (13%), Positives = 54/151 (35%), Gaps = 8/151 (5%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI- 556
           +        NA Y++ +  +  P+++     G       I  ++      +W   +    
Sbjct: 414 LGTRYSEAMNATYLDENG-RAQPMLMGCYGIGVSRTLSAIAEQHHDEKGLIWPKSVAPYD 472

Query: 557 -----VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
                +     +  E A+++    ++    +  D R E    K  +  +  +PI I  G 
Sbjct: 473 LHILALNMKNEAQKELAEQLYGKFQAEGYEVLYDDRAERAGVKFADSDLIGLPIRITVGK 532

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           + A E  + ++   +  + +VS+ +    + 
Sbjct: 533 R-ADEGIVEVKIRKTGESAEVSVDELSEFIK 562


>gi|153952152|ref|YP_001398429.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. doylei 269.97]
 gi|166980114|sp|A7H4J9|SYP_CAMJD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|152939598|gb|ABS44339.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. doylei 269.97]
          Length = 569

 Score =  131 bits (328), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 44/241 (18%), Positives = 93/241 (38%), Gaps = 11/241 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            T+          +++    H  L R      + + GSG+  +   G ++   + + ++ 
Sbjct: 4   FTKFYAPSLKEAPKDASLPSHIFLTRAG---FVEQIGSGLYNFLPLGKRVLDKIKNIVKE 60

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +E+N   +    LWQ+SG ++ +   +   K   +       F L P +    
Sbjct: 61  EMDKAGAQEVNLSFITPASLWQESGRYNVFGKELLRFKDRKEN-----EFVLGPTHEEAM 115

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           +++  + + SY++LP+ L + G  +R+E      GL+R R F   D + F   E+     
Sbjct: 116 LSLVKNKITSYKQLPLHLYQIGLKFRDEARPRF-GLLRCREFLMKDGYSFHANEEDLGRE 174

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            + ++     I +  G +   V+  +      GS      A+N    +L          I
Sbjct: 175 FELMYKTYSQILQRMGLDFRAVEADSGAIGGSGSKEFMVLAKNGEDDILICENCDYAANI 234

Query: 464 N 464
            
Sbjct: 235 E 235



 Score = 79.4 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 55/165 (33%), Gaps = 9/165 (5%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNLP 547
           +  + G I       S+         + K  P  +     G   R + + IE +      
Sbjct: 407 KGIEVGHIFKLGQKYSKAMNANFLDENGKSQPFYMGCYGIGVS-RLLAVAIEASHDEKGC 465

Query: 548 LW---LSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W   L+P    +          +E+A ++   L    L +  D RNE    K+ +  + 
Sbjct: 466 IWNKTLAPFVLEIIVSNIKDEKTLEFANKLYEDLTELGLEVLLDDRNERFGVKMNDFELM 525

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
             P  ++ G K      I   +      + +   +   IL K+ L
Sbjct: 526 GFPYALVIG-KGLENNEIEFIQREGLVKELIKTDELTEILKKKVL 569


>gi|87311204|ref|ZP_01093327.1| prolyl-tRNA synthetase [Blastopirellula marina DSM 3645]
 gi|87286112|gb|EAQ78023.1| prolyl-tRNA synthetase [Blastopirellula marina DSM 3645]
          Length = 506

 Score =  131 bits (328), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 64/445 (14%), Positives = 147/445 (33%), Gaps = 73/445 (16%)

Query: 228 QQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI 287
           +           +     ++++ +  DL  ++     ++     GW I++ + + +    
Sbjct: 3   KAPQNAISPTRADDYPEWYQQVIKAADLAEVSPVRGCMVI-KPWGWSIWENMQAVLDGMF 61

Query: 288 KD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTI----------KDLRTFA 335
           K+  +E    P  +     + ++ H + +      V                 K      
Sbjct: 62  KETGHENAYFPLFIPMSFLEKEAEHVEGFAKECAVVTHHRLEPGPNGGLVPAGKLDEPLI 121

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-F 394
           ++P +     A++   ++SYR+LP+ + ++ +V R E        +R   F   + H   
Sbjct: 122 VRPTSETIIGAMYAKWVQSYRDLPILINQWANVVRWELR--TRMFLRTTEFLWQEGHTAH 179

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDT 454
            T E+   E  ++      +Y DF    + + +        G    W+            
Sbjct: 180 ATAEEAIAETRQML----EVYADFAENYMAMPVIK------GEKTSWERF---------- 219

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH 514
                            GA      E +++D   +  Q GT        S+  A  +   
Sbjct: 220 ----------------PGASMTLSIESMMQDR--KALQAGTSHFLGQNFSK--AQEIKFQ 259

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVE---- 566
           +++          +G   R +G +I    ++    +P  L+P   ++  I  S  E    
Sbjct: 260 TQEGTEEFAWTTSWGVSTRLVGGLIMTHSDDDGLIVPPRLAPKHIVLLPIYRSDEERAAV 319

Query: 567 --YAQEIANLLK-----SHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSI 619
             Y  ++ + LK        + +  D R+     K  +H  K +P+    G ++ +  S+
Sbjct: 320 LAYVDQLNSALKGVQYHGAPVRVLIDDRDIRGGEKTWQHIKKGVPLRAEIGPRDVASDSV 379

Query: 620 GIRRFGS--TTTQKVSLLDAIPILT 642
            + R        +     + +  +T
Sbjct: 380 FLARRDQSPKDKKGTPKAELVATIT 404


>gi|46446958|ref|YP_008323.1| prolyl-tRNA synthetase [Candidatus Protochlamydia amoebophila
           UWE25]
 gi|81626837|sp|Q6MBK1|SYP_PARUW RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|46400599|emb|CAF24048.1| putative prolyl-tRNA synthetase [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 507

 Score =  131 bits (328), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 71/444 (15%), Positives = 152/444 (34%), Gaps = 74/444 (16%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
            E      ++++ +  DL   +     ++     G+ I++ +   +  +IK+  +E    
Sbjct: 14  RENDYPEWYQQVVKASDLAENSPVRGSMVI-KPWGYGIWENIQRQLDDRIKETGHENAYF 72

Query: 297 PQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLR---------TFALKPMNCPGHVA 346
           P  +     + ++ H + +      V       KD R            ++P +      
Sbjct: 73  PLFIPLSFLEKEAAHIEGFAKECAVVTHHRLEEKDGRLIPAGPLEEPLIVRPTSETIIGD 132

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECL 405
            F+  ++SYR+LP+ + ++ +V R E        +R   F   + H    T E+   E +
Sbjct: 133 SFSRWVESYRDLPLLINQWANVVRWEMRP--RIFLRTTEFLWQEGHTAHATHEEALQETM 190

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
            +  +  S  +D     ++V   +  E+  G       AEN                   
Sbjct: 191 TMLEVYRSFVEDVLAIPVIVGEKSPGERFPG-------AENTF----------------- 226

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
                         E +++D       C +  +  N     N  + N   +  +    + 
Sbjct: 227 ------------TLEAMMQDR-KALQSCTSHYLGQNFAKGSNIRFSNMEGQLEYA---YT 270

Query: 526 AVFGSIERFIGIMIENFKGNLPLWLSPI----QAIVTTITSS------AVEYAQEIANLL 575
             +G   R IG +I     +  L L P     Q ++  +          +EYA+ +A  L
Sbjct: 271 TSWGMTTRLIGSLIMCHGDDDGLRLPPRIAHKQIVIVPVIPKPELEAQVLEYAENLAAEL 330

Query: 576 KSHHLS-----IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS--TT 628
           +          +  D R++    K  E   K +P+ +  G ++ +E+++ + R       
Sbjct: 331 RKQIFYGKPLTVHIDKRDKRGGEKNWEWVKKGVPLRLEVGPRDINEQAVMVARRDQSPKN 390

Query: 629 TQKVSLLDAIPILTKESLPPDCQK 652
            Q +     +      S+  D Q+
Sbjct: 391 KQSLPKQQFVQ--QAASILEDIQR 412


>gi|56963999|ref|YP_175730.1| prolyl-tRNA synthetase [Bacillus clausii KSM-K16]
 gi|81822102|sp|Q5WFT6|SYP_BACSK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|56910242|dbj|BAD64769.1| proline-tRNA synthetase [Bacillus clausii KSM-K16]
          Length = 566

 Score =  130 bits (327), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 45/238 (18%), Positives = 89/238 (37%), Gaps = 11/238 (4%)

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK 288
                      ++E   H+ + R   +  IA    GV  +     +    + + +R ++ 
Sbjct: 6   YLAPTMRDVPADAEAISHQLMLRAGMMRQIAA---GVYAYLPLAKRTIAKIEAIIREELD 62

Query: 289 D-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
               +E+  P +    LWQ SG W++    +  +K      +  R FAL P +     ++
Sbjct: 63  AIGAQELTLPSLHPAELWQASGRWEAMGDELVRLKD-----RHNRDFALGPTHEEVITSL 117

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT-KEQMFNECLK 406
              G+ SY++LP+ + +  + +R+E      GL+R R F   DA+ F    E +     +
Sbjct: 118 IKDGIASYKKLPLCVYQVQTKFRDERRPRF-GLLRGREFIMKDAYSFHDSPESLDEAYWQ 176

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
           +H     I+   G E   V   +       +      A      V+ +  +     + 
Sbjct: 177 MHGAYSRIFTRVGLEFRPVIADSGAMGGKDTHEFMALASVGEDTVVYSDGSDYAANLE 234



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 18/152 (11%), Positives = 56/152 (36%), Gaps = 8/152 (5%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL---SPIQ 554
           +        +A Y++    K  P ++     G       ++ ++      +W    +P  
Sbjct: 413 LGTRYSESLDAKYLDGQG-KAQPFLMGCYGIGVSRTLAAVIEQHHDEAGIVWPKAVAPFD 471

Query: 555 AIVTTITSSAVEY---AQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
             +  +     +    A+++ + ++   + +  D R E    K ++  +  +P+ +  G 
Sbjct: 472 VHLLALNVKNEDQKTLAEQLYSDIRQAGIDVLYDDRPERAGVKFKDADLIGLPVRVAVGK 531

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           + A E  I ++   +    +++  + +  L  
Sbjct: 532 R-AGEGIIEVKVRKTGEQLELTASELVRWLND 562


>gi|218562195|ref|YP_002343974.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|81858473|sp|Q9PHX1|SYP_CAMJE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|112359901|emb|CAL34689.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
          Length = 569

 Score =  130 bits (327), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 43/229 (18%), Positives = 92/229 (40%), Gaps = 11/229 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            T+          +++    H  L R      + + GSG+  +   G ++   + + ++ 
Sbjct: 4   FTKFYAPSLKEAPKDASLPSHIFLTRAG---FVEQIGSGLYNFLPLGKRVLDKIKNIVKE 60

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +E+N   +    LWQ+SG ++ +   +   K   +       F L P +    
Sbjct: 61  EMDKAGAQEVNLSFITPASLWQESGRYNVFGKELLRFKDRKEN-----EFVLGPTHEEAM 115

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           +++  + + SY++LP+ L + G  +R+E      GL+R R F   D + F   E+     
Sbjct: 116 LSLVKNKITSYKQLPLHLYQIGLKFRDEARPRF-GLLRCREFLMKDGYSFHANEEDLGRE 174

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
            + ++     I +  G +   V+  +      GS      A+N    +L
Sbjct: 175 FELMYKTYSQILQRMGLDFRAVEADSGAIGGSGSKEFMVLAKNGEDDIL 223



 Score = 82.5 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 59/165 (35%), Gaps = 9/165 (5%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNLP 547
           +  + G I       S+         + K  P  +     G   R + + IE N      
Sbjct: 407 KGIEVGHIFKLGQKYSKAMNANFLDENGKSQPFYMGCYGIGVS-RLLAVAIEANHDEKGC 465

Query: 548 LW---LSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W   L+P    +         A+E+A ++   L +  L +  D RNE    K+ +  + 
Sbjct: 466 IWNKTLAPFVLEIIVSNLKDEKALEFANKLYRDLTNLGLEVLLDDRNERFGVKMNDFELM 525

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
             P  ++ G K      I + +      + +   + + IL K+ L
Sbjct: 526 GFPYALVIG-KGLENNEIELIQREGLVKELIKTDELMEILKKKVL 569


>gi|88597079|ref|ZP_01100315.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 84-25]
 gi|88190768|gb|EAQ94741.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 84-25]
 gi|315927040|gb|EFV06395.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           DFVF1099]
          Length = 568

 Score =  130 bits (327), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 43/229 (18%), Positives = 92/229 (40%), Gaps = 11/229 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            T+          +++    H  L R      + + GSG+  +   G ++   + + ++ 
Sbjct: 3   FTKFYAPSLKEAPKDASLPSHIFLTRAG---FVEQIGSGLYNFLPLGKRVLDKIKNIVKE 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +E+N   +    LWQ+SG ++ +   +   K   +       F L P +    
Sbjct: 60  EMDKAGAQEVNLSFITPASLWQESGRYNVFGKELLRFKDRKEN-----EFVLGPTHEEAM 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           +++  + + SY++LP+ L + G  +R+E      GL+R R F   D + F   E+     
Sbjct: 115 LSLVKNKITSYKQLPLHLYQIGLKFRDEARPRF-GLLRCREFLMKDGYSFHANEEDLGRE 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
            + ++     I +  G +   V+  +      GS      A+N    +L
Sbjct: 174 FELMYKTYSQILQRMGLDFRAVEADSGAIGGSGSKEFMVLAKNGEDDIL 222



 Score = 82.5 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 59/165 (35%), Gaps = 9/165 (5%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNLP 547
           +  + G I       S+         + K  P  +     G   R + + IE N      
Sbjct: 406 KGIEVGHIFKLGQKYSKAMNANFLDENGKSQPFYMGCYGIGVS-RLLAVAIEANHDEKGC 464

Query: 548 LW---LSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W   L+P    +         A+E+A ++   L +  L +  D RNE    K+ +  + 
Sbjct: 465 IWNKTLAPFVLEIIVSNLKDEKALEFANKLYRDLTNLGLEVLLDDRNERFGVKMNDFELM 524

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
             P  ++ G K      I + +      + +   + + IL K+ L
Sbjct: 525 GFPYALVIG-KGLENNEIELIQREGLVKELIKTDELMEILKKKVL 568


>gi|308173620|ref|YP_003920325.1| prolyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|307606484|emb|CBI42855.1| prolyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|328553448|gb|AEB23940.1| prolyl-tRNA synthetase [Bacillus amyloliquefaciens TA208]
 gi|328911761|gb|AEB63357.1| prolyl-tRNA synthetase [Bacillus amyloliquefaciens LL3]
          Length = 564

 Score =  130 bits (327), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 51/243 (20%), Positives = 98/243 (40%), Gaps = 25/243 (10%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E + H+ L R      I ++ SGV  +    +++ Q +   +R +++  +  E+  P 
Sbjct: 17  DAEAKSHKLLLRAG---FIRQNTSGVYSYMPLAYRVIQNIQKIVREEMEKINAVEMLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +     WQ+SG W +Y   +  +K      +  R FAL   +     ++    +KSY+ L
Sbjct: 74  LQQAETWQESGRWYTYGPELMRLKD-----RHGREFALGATHEEVITSLVRDEVKSYKRL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+ L +  S +R+E      GL+R R F   DA+ F   E+   E  +  N+  +    F
Sbjct: 129 PLTLYQIQSKFRDEKRPRF-GLLRGREFIMKDAYSFHASEESLEETYQ--NMYGAYSSIF 185

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
              ++ V+        +G     +         L  I   +       +   +G+ Y   
Sbjct: 186 ARCELNVRPVIADSGAMGGKDTHEFM------ALSEIGEDT-------IAYSDGSSYAAN 232

Query: 479 FEY 481
            E 
Sbjct: 233 TEM 235



 Score = 76.0 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 21/151 (13%), Positives = 54/151 (35%), Gaps = 8/151 (5%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI- 556
           +        NA Y++ +  +  P+++     G       I  ++      +W   +    
Sbjct: 414 LGTRYSEAMNATYLDENG-RAQPMLMGCYGIGVSRTLSAIAEQHHDEKGLIWPKSVAPYD 472

Query: 557 -----VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
                +     +  E A+++    ++    +  D R E    K  +  +  +PI I  G 
Sbjct: 473 LHILALNMKNEAQKELAEKLYGKFQAEGYEVLYDDRAERAGVKFADSDLIGLPIRITVGK 532

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           + A E  + ++   +  + +VS+ +    + 
Sbjct: 533 R-ADEGIVEVKIRKTGESAEVSVDELSEFIK 562


>gi|15609982|ref|NP_217361.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis H37Rv]
 gi|148662686|ref|YP_001284209.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|148824035|ref|YP_001288789.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis F11]
 gi|161350062|ref|NP_337423.2| prolyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551]
 gi|167967198|ref|ZP_02549475.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|215404817|ref|ZP_03416998.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987]
 gi|215412677|ref|ZP_03421395.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A]
 gi|215428284|ref|ZP_03426203.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis T92]
 gi|215431786|ref|ZP_03429705.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis EAS054]
 gi|218754593|ref|ZP_03533389.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis GM 1503]
 gi|219558862|ref|ZP_03537938.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis T17]
 gi|253798069|ref|YP_003031070.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis KZN 1435]
 gi|254232940|ref|ZP_04926267.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis C]
 gi|254365491|ref|ZP_04981536.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis str.
           Haarlem]
 gi|254551909|ref|ZP_05142356.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|260201976|ref|ZP_05769467.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis T46]
 gi|260206156|ref|ZP_05773647.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis K85]
 gi|289444396|ref|ZP_06434140.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis T46]
 gi|289553367|ref|ZP_06442577.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis KZN 605]
 gi|289571033|ref|ZP_06451260.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis T17]
 gi|289575546|ref|ZP_06455773.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis K85]
 gi|289746643|ref|ZP_06506021.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987]
 gi|289751506|ref|ZP_06510884.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis T92]
 gi|289754953|ref|ZP_06514331.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis EAS054]
 gi|289763021|ref|ZP_06522399.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis GM 1503]
 gi|297635458|ref|ZP_06953238.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis KZN 4207]
 gi|297732457|ref|ZP_06961575.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis KZN R506]
 gi|298526313|ref|ZP_07013722.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A]
 gi|306777129|ref|ZP_07415466.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu001]
 gi|306781035|ref|ZP_07419372.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu002]
 gi|306789713|ref|ZP_07428035.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu004]
 gi|306794347|ref|ZP_07432649.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu005]
 gi|306798770|ref|ZP_07437072.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu006]
 gi|306804616|ref|ZP_07441284.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu008]
 gi|306807350|ref|ZP_07444018.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu007]
 gi|306968909|ref|ZP_07481570.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu009]
 gi|306973245|ref|ZP_07485906.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu010]
 gi|307080954|ref|ZP_07490124.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu011]
 gi|307085549|ref|ZP_07494662.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu012]
 gi|313659789|ref|ZP_07816669.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis KZN V2475]
 gi|2501040|sp|O05814|SYP_MYCTU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|2078014|emb|CAB08445.1| PROBABLE PROLYL-TRNA SYNTHETASE PROS (PROLINE--TRNA LIGASE) (PRORS)
           (GLOBAL RNA SYNTHESIS FACTOR) (PROLINE TRANSLASE)
           [Mycobacterium tuberculosis H37Rv]
 gi|124601999|gb|EAY61009.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis C]
 gi|134151004|gb|EBA43049.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis str.
           Haarlem]
 gi|148506838|gb|ABQ74647.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|148722562|gb|ABR07187.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis F11]
 gi|253319572|gb|ACT24175.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis KZN 1435]
 gi|289417315|gb|EFD14555.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis T46]
 gi|289437999|gb|EFD20492.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis KZN 605]
 gi|289539977|gb|EFD44555.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis K85]
 gi|289544787|gb|EFD48435.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis T17]
 gi|289687171|gb|EFD54659.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987]
 gi|289692093|gb|EFD59522.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis T92]
 gi|289695540|gb|EFD62969.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis EAS054]
 gi|289710527|gb|EFD74543.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis GM 1503]
 gi|298496107|gb|EFI31401.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A]
 gi|308214498|gb|EFO73897.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu001]
 gi|308326143|gb|EFP14994.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu002]
 gi|308333812|gb|EFP22663.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu004]
 gi|308337323|gb|EFP26174.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu005]
 gi|308340981|gb|EFP29832.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu006]
 gi|308346273|gb|EFP35124.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu007]
 gi|308348796|gb|EFP37647.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu008]
 gi|308353522|gb|EFP42373.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu009]
 gi|308357363|gb|EFP46214.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu010]
 gi|308361316|gb|EFP50167.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu011]
 gi|308364916|gb|EFP53767.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu012]
 gi|323718544|gb|EGB27714.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis CDC1551A]
 gi|326904458|gb|EGE51391.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis W-148]
 gi|328457842|gb|AEB03265.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis KZN 4207]
          Length = 582

 Score =  130 bits (327), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 51/362 (14%), Positives = 119/362 (32%), Gaps = 30/362 (8%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +  +A    G+  W   G ++ + +   +R ++     +EI  P 
Sbjct: 19  DAEVASHKLLIRAGYIRPVA---PGLYSWLPLGLRVLRNIERVIRDEMNAIGGQEILFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++ +  W  Y  ++F +K      +    + L P +             SY++ 
Sbjct: 76  LLPRAPYETTNRWTQYGDSVFRLKD-----RRGNDYLLGPTHEELFTLTVKGEYSSYKDF 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKD 417
           P+ L +  + YR+E      G++R R F   D++ F             H      I+  
Sbjct: 131 PLTLYQIQTKYRDEARPR-AGILRAREFVMKDSYSFDIDAAGLKAAYHAHREAYQRIFDR 189

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
                ++V   +       S+    ++ +     +  +++     +   V          
Sbjct: 190 LQVRYVIVSAVSGAMGGSASEEFLAESPSGEDAFVRCLESGYAANVEAVVTARP---DTL 246

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
             + + +  +       TI       +  +     + ++    V+I     G     + I
Sbjct: 247 PIDGLPEAVVHDTGDTPTIASLVAWANEADLGRTVTAADTLKNVLIKVRQPGGDTELLAI 306

Query: 538 MI----ENFKGNLPLWLSPIQAIVTTITSSAVEYAQE---IA-----NLLKSHHLSIETD 585
            +    E     L   L P             ++A+    +        L+ +++    D
Sbjct: 307 GVPGDREVDDKRLGAALEPA----DYALLDDDDFAKHPFLVKGYIGPKALRENNVRYLVD 362

Query: 586 FR 587
            R
Sbjct: 363 PR 364



 Score = 64.8 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 24/151 (15%), Positives = 53/151 (35%), Gaps = 10/151 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG--- 544
           R  + G I Q+       F A  +    +     M    +   + R + ++ E       
Sbjct: 419 RGIEIGHIFQLGSKYTDAFTADVLGEDGKPVRLTMGSYGI--GVSRLVAVVAEQHHDELG 476

Query: 545 -NLPLWLSPIQAIVTTITSSAVEYAQEIANL--LKSHHLSIETDFRNETINYKIREHSIK 601
              P  ++P    +      A   A   A    L    + +  D R  +   K ++  + 
Sbjct: 477 LRWPSTVAPFDVHLVIANKDAQARAGATALAADLDRLGVEVLLDDRQASPGVKFKDAELL 536

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
            +P I++ G +  ++  + +R   S  T+++
Sbjct: 537 GMPWIVVVG-RGWADGVVELRDRFSGQTREL 566


>gi|306785673|ref|ZP_07423995.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu003]
 gi|308329673|gb|EFP18524.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu003]
          Length = 582

 Score =  130 bits (327), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 51/362 (14%), Positives = 119/362 (32%), Gaps = 30/362 (8%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +  +A    G+  W   G ++ + +   +R ++     +EI  P 
Sbjct: 19  DAEVASHKLLIRAGYIRPVA---PGLYSWLPLGLRVLRNIERVIRDEMNAIGGQEILFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++ +  W  Y  ++F +K      +    + L P +             SY++ 
Sbjct: 76  LLPRAPYETTNRWTQYGDSVFRLKD-----RRGNDYLLGPTHEELFTLTVKGEYSSYKDF 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKD 417
           P+ L +  + YR+E      G++R R F   D++ F             H      I+  
Sbjct: 131 PLTLYQIQTKYRDEARPR-AGILRAREFVMKDSYSFDIDAAGLKAAYHAHREAYQRIFDR 189

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
                ++V   +       S+    ++ +     +  +++     +   V          
Sbjct: 190 LQVRYVIVSAVSGAMGGSASEEFLAESPSGEDAFVRCLESGYAANVEAVVTARP---DTL 246

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
             + + +  +       TI       +  +     + ++    V+I     G     + I
Sbjct: 247 PIDGLPEAVVHDTGDTPTIASLVAWANEADLGRTVTAADTLKNVLIKVRQPGGDTELLAI 306

Query: 538 MI----ENFKGNLPLWLSPIQAIVTTITSSAVEYAQE---IA-----NLLKSHHLSIETD 585
            +    E     L   L P             ++A+    +        L+ +++    D
Sbjct: 307 GVPGDREVDDKRLGAALEPA----DYALLDDDDFAKHPFLVKGYIGPKALRENNVRYLVD 362

Query: 586 FR 587
            R
Sbjct: 363 PR 364



 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/151 (15%), Positives = 53/151 (35%), Gaps = 10/151 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG--- 544
           R  + G I Q+       F A  +    +     M    +   + R + ++ E       
Sbjct: 419 RGIEIGHIFQLGSKYTDAFTADVLGEDGKPVRLTMGSYGI--GVSRLVAVVAEQHHDELG 476

Query: 545 -NLPLWLSPIQAIVTTITSSAVEYAQEIANL--LKSHHLSIETDFRNETINYKIREHSIK 601
              P  ++P    +      A   A   A    L    + +  D R  +   K ++  + 
Sbjct: 477 LRWPSTVAPFDVHLVIANKDAQARAGATALAADLDRLGVEVLLDDRQASAGVKFKDAELL 536

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
            +P I++ G +  ++  + +R   S  T+++
Sbjct: 537 GMPWIVVVG-RGWADGVVELRDRFSGQTREL 566


>gi|260187861|ref|ZP_05765335.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis CPHL_A]
 gi|289448507|ref|ZP_06438251.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis CPHL_A]
 gi|289421465|gb|EFD18666.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis CPHL_A]
          Length = 582

 Score =  130 bits (327), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 51/362 (14%), Positives = 119/362 (32%), Gaps = 30/362 (8%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +  +A    G+  W   G ++ + +   +R ++     +EI  P 
Sbjct: 19  DAEVASHKLLIRAGYIRPVA---PGLYSWLPLGLRVLRNIERVIRDEMNAIGGQEILFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++ +  W  Y  ++F +K      +    + L P +             SY++ 
Sbjct: 76  LLPRAPYETTNRWTQYGDSVFRLKD-----RRGNDYLLGPTHEELFTLTVKGEYSSYKDF 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKD 417
           P+ L +  + YR+E      G++R R F   D++ F             H      I+  
Sbjct: 131 PLTLYQIQTKYRDEARPR-AGILRAREFVMKDSYSFDIDAAGLKAAYHAHREAYQRIFDR 189

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
                ++V   +       S+    ++ +     +  +++     +   V          
Sbjct: 190 LQVRYVIVSAVSGAMGGSASEEFLAESPSGEDAFVRCLESGYAANVEAVVTARP---DTL 246

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
             + + +  +       TI       +  +     + ++    V+I     G     + I
Sbjct: 247 PIDGLPEAVVHDTGDTPTIASLVAWANEADLGRTVTAADTLKNVLIKVRQPGGDTELLAI 306

Query: 538 MI----ENFKGNLPLWLSPIQAIVTTITSSAVEYAQE---IA-----NLLKSHHLSIETD 585
            +    E     L   L P             ++A+    +        L+ +++    D
Sbjct: 307 GVPGDREVDDKRLGAALEPA----DYALLDDDDFAKHPFLVKGYIGPKALRENNVRYLVD 362

Query: 586 FR 587
            R
Sbjct: 363 PR 364



 Score = 64.8 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 24/151 (15%), Positives = 53/151 (35%), Gaps = 10/151 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG--- 544
           R  + G I Q+       F A  +    +     M    +   + R + ++ E       
Sbjct: 419 RGIEIGHIFQLGSKYTDAFTADVLGEDGKPVRLTMGSYGI--GVSRLVAVVAEQHHDELG 476

Query: 545 -NLPLWLSPIQAIVTTITSSAVEYAQEIANL--LKSHHLSIETDFRNETINYKIREHSIK 601
              P  ++P    +      A   A   A    L    + +  D R  +   K ++  + 
Sbjct: 477 LRWPSTVAPFDVHLVIANKDAQARAGATALAADLDRLGVEVLLDDRQASPGVKFKDAELL 536

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
            +P I++ G +  ++  + +R   S  T+++
Sbjct: 537 GMPWIVVVG-RGWADGVVELRDRFSGQTREL 566


>gi|54020489|ref|YP_115908.1| prolyl-tRNA synthetase [Mycoplasma hyopneumoniae 232]
 gi|81823524|sp|Q600Q7|SYP_MYCH2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|53987662|gb|AAV27863.1| prolyl aminoacyl-tRNA synthetase [Mycoplasma hyopneumoniae 232]
          Length = 479

 Score =  130 bits (327), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 65/413 (15%), Positives = 138/413 (33%), Gaps = 57/413 (13%)

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK 288
            +  + +     +  + +  +  + DL +       + F    G+KI++ ++  +     
Sbjct: 1   MKKPEKITSRTANFAKWYVDVITQADLMNYGPIKGTIYF-KPLGYKIWENIVKIVNAYFV 59

Query: 289 DDYEE-INTPQVLDQHL-WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA 346
               E +  P ++ Q    ++  H + +   +  +    D       + ++P +      
Sbjct: 60  KQKIENVYFPLLIPQDFIEKEKKHIEGFAPELLTITKVGDKNLVENIY-IRPTSELLFAD 118

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE-QMFNECL 405
            F   +     LP++L ++  V R E   + +  +R   F   + H     + +      
Sbjct: 119 YFKAEIAKNNILPIKLNQWSQVLRWEK--TTNPFLRNTEFLWQEGHTIHASKVEADQFAK 176

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
           KI        +++    ++    T  EK  G                             
Sbjct: 177 KIARFYKYFLENYLAIPVISGQKTEREKFAG----------------------------- 207

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIH 524
                  A      E ++++   R  Q  T   +  N    F  FY N  ++   P    
Sbjct: 208 -------AVNTYTVEAMMQNF--RALQSATAHFLGQNFAKNFEIFYKNKENKSQIPF--- 255

Query: 525 RAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVT----TITSSAVEYAQEIANLLK 576
           +  +G   R IG ++    ++     P  ++PIQ  +             +A++IA +LK
Sbjct: 256 QTSWGLSTRLIGAIVMVHSDDNGLIFPPKIAPIQVDILEFFSKKNQEVKIFAKKIAKILK 315

Query: 577 SHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           +  +S + D  ++ I YKI    +   PI I  G  E     I + R  +   
Sbjct: 316 NAKISYKIDDTDQQIGYKINNSEVHGAPIRIEIGPNEVKNNQICLVRRDNHQK 368


>gi|13882685|gb|AAK47237.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551]
          Length = 578

 Score =  130 bits (327), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 51/362 (14%), Positives = 119/362 (32%), Gaps = 30/362 (8%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +  +A    G+  W   G ++ + +   +R ++     +EI  P 
Sbjct: 15  DAEVASHKLLIRAGYIRPVA---PGLYSWLPLGLRVLRNIERVIRDEMNAIGGQEILFPA 71

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++ +  W  Y  ++F +K      +    + L P +             SY++ 
Sbjct: 72  LLPRAPYETTNRWTQYGDSVFRLKD-----RRGNDYLLGPTHEELFTLTVKGEYSSYKDF 126

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKD 417
           P+ L +  + YR+E      G++R R F   D++ F             H      I+  
Sbjct: 127 PLTLYQIQTKYRDEARPR-AGILRAREFVMKDSYSFDIDAAGLKAAYHAHREAYQRIFDR 185

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
                ++V   +       S+    ++ +     +  +++     +   V          
Sbjct: 186 LQVRYVIVSAVSGAMGGSASEEFLAESPSGEDAFVRCLESGYAANVEAVVTARP---DTL 242

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
             + + +  +       TI       +  +     + ++    V+I     G     + I
Sbjct: 243 PIDGLPEAVVHDTGDTPTIASLVAWANEADLGRTVTAADTLKNVLIKVRQPGGDTELLAI 302

Query: 538 MI----ENFKGNLPLWLSPIQAIVTTITSSAVEYAQE---IA-----NLLKSHHLSIETD 585
            +    E     L   L P             ++A+    +        L+ +++    D
Sbjct: 303 GVPGDREVDDKRLGAALEPA----DYALLDDDDFAKHPFLVKGYIGPKALRENNVRYLVD 358

Query: 586 FR 587
            R
Sbjct: 359 PR 360



 Score = 64.8 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 24/151 (15%), Positives = 53/151 (35%), Gaps = 10/151 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG--- 544
           R  + G I Q+       F A  +    +     M    +   + R + ++ E       
Sbjct: 415 RGIEIGHIFQLGSKYTDAFTADVLGEDGKPVRLTMGSYGI--GVSRLVAVVAEQHHDELG 472

Query: 545 -NLPLWLSPIQAIVTTITSSAVEYAQEIANL--LKSHHLSIETDFRNETINYKIREHSIK 601
              P  ++P    +      A   A   A    L    + +  D R  +   K ++  + 
Sbjct: 473 LRWPSTVAPFDVHLVIANKDAQARAGATALAADLDRLGVEVLLDDRQASPGVKFKDAELL 532

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
            +P I++ G +  ++  + +R   S  T+++
Sbjct: 533 GMPWIVVVG-RGWADGVVELRDRFSGQTREL 562


>gi|301760003|ref|XP_002915815.1| PREDICTED: probable prolyl-tRNA synthetase, mitochondrial-like
           [Ailuropoda melanoleuca]
 gi|281353585|gb|EFB29169.1| hypothetical protein PANDA_003827 [Ailuropoda melanoleuca]
          Length = 475

 Score =  130 bits (327), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 66/377 (17%), Positives = 129/377 (34%), Gaps = 31/377 (8%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I     G         +  + L   + ++++    +++N P +    LW+ +  WD    
Sbjct: 80  IHPASPGCYHLLPYTVRAMEKLERVIDQEMQAIGGQKVNMPSLSPAELWRATNRWDLMGK 139

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPSG 375
            +  ++      +  + + L P +     A+       SY++LP  L +    +R+EP  
Sbjct: 140 ELLRLRD-----RHGKEYCLGPTHEEAVTALVASQKTMSYKQLPFLLYQVTRKFRDEPRP 194

Query: 376 SLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              GL+R R F   D + F  + E   +    +     S+++  G   + V+        
Sbjct: 195 RF-GLLRGREFYMKDMYTFDSSPEAARHTYGLVCEAYGSLFRRLGLRCVRVQADVGSIGG 253

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
             S          +      +  S     NT  L        P     L  A G +    
Sbjct: 254 TASHEF--QLPADIGEDRFAVCPSCGFSANTETLRS-SQTDCPTCRGPLTKARGIEV-GH 309

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG-SIERFIGIMIENFKG----NLPLW 549
           T  +     S FNA + ++  +   P +     +G  + R +   IE          P  
Sbjct: 310 TFYLGTKYSSIFNAQFTDAQGK---PCLAEMGCYGLGVTRILAAAIEVLSTEDCIRWPGL 366

Query: 550 LSPIQAIVTT-----ITSSAVEYAQEIANLLKSH----HLSIETDFRNE-TINYKIREHS 599
           L+P Q  +          +A E    + +L+       H  +  D R   TI  ++++ +
Sbjct: 367 LAPYQVCLIPPKKGSKEEAAAELMGHLYDLITEAVPQLHGEVLLDDRTHLTIGNRLKDAN 426

Query: 600 IKKIPIIIICGDKEASE 616
               P +II G +   +
Sbjct: 427 KFGYPFVIIAGKRALED 443


>gi|315057961|gb|ADT72290.1| Prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni S3]
          Length = 568

 Score =  130 bits (327), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 43/229 (18%), Positives = 92/229 (40%), Gaps = 11/229 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            T+          +++    H  L R      + + GSG+  +   G ++   + + ++ 
Sbjct: 3   FTKFYAPSLKEAPKDASLPSHIFLTRAG---FVEQIGSGLYNFLPLGKRVLDKIKNIVKE 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +E+N   +    LWQ+SG ++ +   +   K   +       F L P +    
Sbjct: 60  EMDKAGAQEVNLSFITPASLWQESGRYNVFGKELLRFKDRKEN-----EFVLGPTHEEAM 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           +++  + + SY++LP+ L + G  +R+E      GL+R R F   D + F   E+     
Sbjct: 115 LSLVKNKITSYKQLPLHLYQIGLKFRDEARPRF-GLLRCREFLMKDGYSFHANEEDLGRE 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
            + ++     I +  G +   V+  +      GS      A+N    +L
Sbjct: 174 FELMYKTYSQILQRMGLDFRAVEADSGAIGGSGSKEFMVLAKNGEDDIL 222



 Score = 79.1 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 59/165 (35%), Gaps = 9/165 (5%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNLP 547
           +  + G I       S+         + K  P  +     G   R + +  E +      
Sbjct: 406 KGIEVGHIFKLGQKYSKAMNANFLDENGKSQPFYMGCYGIGVS-RLLAVATEASHDEKGC 464

Query: 548 LW---LSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W   L+P    +         A+E+A ++   L +  L +  D RNE    K+ +  + 
Sbjct: 465 IWNKTLAPFVLEIIVSNLKDEKALEFANKLYEDLTNLGLEVLLDDRNERFGVKMNDFELM 524

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
             P  ++ G K   +  I + +      + +   + + IL K+ L
Sbjct: 525 GFPYALVVG-KGLEKNEIELIQREGLIKELIKTDELMEILKKKVL 568


>gi|86149024|ref|ZP_01067256.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|85840382|gb|EAQ57639.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CF93-6]
          Length = 569

 Score =  130 bits (327), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 43/229 (18%), Positives = 92/229 (40%), Gaps = 11/229 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            T+          +++    H  L R      + + GSG+  +   G ++   + + ++ 
Sbjct: 4   FTKFYAPSLKEAPKDASLPSHIFLTRAG---FVEQIGSGLYNFLPLGKRVLDKIKNIVKE 60

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +E+N   +    LWQ+SG ++ +   +   K   +       F L P +    
Sbjct: 61  EMDKAGAQEVNLSFITPASLWQESGRYNVFGKELLRFKDRKEN-----EFVLGPTHEEAM 115

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           +++  + + SY++LP+ L + G  +R+E      GL+R R F   D + F   E+     
Sbjct: 116 LSLVKNKITSYKQLPLHLYQIGLKFRDEARPRF-GLLRCREFLMKDGYSFHANEEDLGRE 174

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
            + ++     I +  G +   V+  +      GS      A+N    +L
Sbjct: 175 FELMYKTYSQILQRMGLDFRAVEADSGAIGGSGSKEFMVLAKNGEDDIL 223



 Score = 82.5 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 59/165 (35%), Gaps = 9/165 (5%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNLP 547
           +  + G I       S+         + K  P  +     G   R + + IE N      
Sbjct: 407 KGIEVGHIFKLGQKYSKAMNANFLDENGKSQPFYMGCYGIGVS-RLLAVAIEANHDEKGC 465

Query: 548 LW---LSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W   L+P    +         A+E+A ++   L +  L +  D RNE    K+ +  + 
Sbjct: 466 IWNKTLAPFVLEIIVSNLKDEKALEFANKLYRDLTNLGLEVLLDDRNERFGVKMNDFELM 525

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
             P  ++ G K      I + +      + +   + + IL K+ L
Sbjct: 526 GFPYALVIG-KGLENNEIELIQREGLVKELIKTDELMEILKKKVL 569


>gi|148238958|ref|YP_001224345.1| prolyl-tRNA synthetase [Synechococcus sp. WH 7803]
 gi|166980165|sp|A5GJD3|SYP_SYNPW RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|147847497|emb|CAK23048.1| Prolyl-tRNA synthetase [Synechococcus sp. WH 7803]
          Length = 594

 Score =  130 bits (327), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 54/228 (23%), Positives = 96/228 (42%), Gaps = 11/228 (4%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +  I   GSG+  +    WK+ + + + +R ++      E   PQ
Sbjct: 17  DAEIPSHQLLVRGGYIRRI---GSGIYAYLPMMWKVLRKINAIVRAELNHLGALETLLPQ 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW++SG W  Y      +   +D  +  R   L P +      +    L+SYR+L
Sbjct: 74  LQPADLWERSGRWQGYTEGEGIMFHLED--RQNRQLGLGPTHEEVITELAGDLLRSYRQL 131

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKD 417
           PV L +  + +R+E      GLMR R F   DA+ F    E + N    +      I++ 
Sbjct: 132 PVTLYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSFHANQEDLENTYQAMATAYARIFER 190

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDA---ENIMKGVLDTIKNSSQDR 462
            G E + V   +       S      A   E+++    D +  ++Q++
Sbjct: 191 CGLEAVAVDADSGAIGGAASQEYMVTAAAGEDLILTSSDGLYAANQEK 238



 Score = 82.9 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 58/162 (35%), Gaps = 9/162 (5%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I Q+        +A + NS  ++   +++     G        + ++      
Sbjct: 429 RGIEVGHIFQLGRKYSEALDARFTNSAGQQE-ALLMGCYGIGISRLAQAAVEQHHDEAGI 487

Query: 548 LWL---SPIQAIVTT---ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            W    +P Q IV        + V  A+E+        +    D R+E    K ++  + 
Sbjct: 488 SWPLGIAPFQVIVVIAKIQDPTQVALAEELYQSFLDAGIDALLDDRDERAGVKFKDADLI 547

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            IP  I+ G ++A E  + +    +  +  V   +A   +  
Sbjct: 548 GIPWRIVVG-RDAGEGKVEVVERSTRCSTSVPHQEAFQQVKD 588


>gi|327541683|gb|EGF28207.1| prolyl-tRNA synthetase [Rhodopirellula baltica WH47]
          Length = 501

 Score =  130 bits (327), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 70/444 (15%), Positives = 148/444 (33%), Gaps = 70/444 (15%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++   T      EE+    ++++ R  DL   +     ++     G+++++ +   +   
Sbjct: 2   SKAPRTAISPTREENYPEWYQQVIRAADLAENSPVRGCMVI-KPWGYQLWENVQRALDDM 60

Query: 287 IKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTI----------KDLRTF 334
            K   ++    P  +     + ++ H + +      V                 K     
Sbjct: 61  FKATGHQNAYFPLFIPMSFLEKEAEHVEGFAKECAVVTHHRLEPDPDGGLRPAGKLEEPL 120

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
            ++P +     A +   ++SYR+LP+ + ++ +V R E        +R   F   + H  
Sbjct: 121 IVRPTSETIIGATYAKWVQSYRDLPILINQWANVVRWEMR--TRMFLRTAEFLWQEGHTV 178

Query: 395 C-TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
             T E+   E  K+      +Y+DF    + +         VGS           K  L+
Sbjct: 179 HATSEEAVEETEKMV----EVYRDFAENWMAM------PVIVGS-----------KTPLE 217

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS 513
                             GA      E +++D   +  Q GT        S+  A  +  
Sbjct: 218 RF---------------PGAVETLSIEAMMQDR--KALQAGTSHFLGQNFSK--AQEIKF 258

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSS-----A 564
            SE           +G   R IG +I    ++    LP  L+P   ++  I         
Sbjct: 259 QSESGDIEFAWTTSWGVSTRLIGALIMTHSDDDGLVLPPRLAPTHVVIQPIYKDGSRAEV 318

Query: 565 VEYAQEIANLLKSHHL-----SIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSI 619
           +EY Q + + L +         +  D R+     K   H  + +PI +  G K+ +  ++
Sbjct: 319 MEYVQSLRDELAAQTYANAPVRVTIDDRDIRGGEKKWYHVKRGVPIRLEVGPKDIAAGTV 378

Query: 620 GIRRFGSTTTQKVSLLDAIPILTK 643
                    +  +   + +  + +
Sbjct: 379 FCGIRNQPKSVGIDRAELVATIGE 402


>gi|219681610|ref|YP_002467996.1| prolyl-tRNA synthetase [Buchnera aphidicola str. 5A (Acyrthosiphon
           pisum)]
 gi|219682167|ref|YP_002468551.1| prolyl-tRNA synthetase [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|257471296|ref|ZP_05635295.1| prolyl-tRNA synthetase [Buchnera aphidicola str. LSR1
           (Acyrthosiphon pisum)]
 gi|254782890|sp|B8D937|SYP_BUCA5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|254782891|sp|B8D7E1|SYP_BUCAT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|219621900|gb|ACL30056.1| prolyl-tRNA synthetase [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|219624453|gb|ACL30608.1| prolyl-tRNA synthetase [Buchnera aphidicola str. 5A (Acyrthosiphon
           pisum)]
 gi|311086555|gb|ADP66636.1| prolyl-tRNA synthetase [Buchnera aphidicola str. TLW03
           (Acyrthosiphon pisum)]
 gi|311087136|gb|ADP67216.1| prolyl-tRNA synthetase [Buchnera aphidicola str. JF99
           (Acyrthosiphon pisum)]
 gi|311087672|gb|ADP67751.1| prolyl-tRNA synthetase [Buchnera aphidicola str. JF98
           (Acyrthosiphon pisum)]
          Length = 572

 Score =  130 bits (327), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 45/257 (17%), Positives = 100/257 (38%), Gaps = 11/257 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       +++   H+ + R   +   +   SG+  W   G ++ + + + +  
Sbjct: 3   TSQYLLSTSKDIPYDAKIISHQLMIRSGMIRKTS---SGLYVWLPTGMRVLKKIKNIITT 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           +++  +  EI  P +  ++LW++SG  + Y   +          +    F L P N    
Sbjct: 60  EMEKINALEILMPIIQPEYLWKESGRLNLYGEELLRFLD-----RRKNQFILGPTNEEVV 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
                  + SY++LP+ + +  + +R+E      G++R R FT  DA+ F   +      
Sbjct: 115 TNFIGSEIHSYKQLPLTVYQIQTKFRDEIRPRF-GIIRTREFTMKDAYSFHINQSCLENT 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             K ++  I+I+K        VK  +       S      ++N    ++ +        +
Sbjct: 174 YNKFYDSYINIFKKMNLNFCAVKADSGSMGGNISHEFQAFSQNGEDEIVFSNDKLYSSNM 233

Query: 464 NTGVLLGEGAFYGPKFE 480
           N    +    F+  K+ 
Sbjct: 234 NMAESIETIDFFKKKYS 250



 Score = 66.3 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 54/164 (32%), Gaps = 13/164 (7%)

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNLPLWL 550
           + G I       SR     V   +     + +     G I R    +IE +   N  +W 
Sbjct: 410 EIGHIFQLGQKYSRKIQQSVKIKNGNLKNLYMGCYGIG-ITRIAAAVIEQHHDKNGIIWP 468

Query: 551 ---SPIQAIVTTITSSAVEYAQEIA----NLLKSHHLSIETDFRNETINYKIREHSIKKI 603
              +P + ++  I        + IA       K   + +  D R+E       E  +  I
Sbjct: 469 DSIAPFEVVILPINMKKDNKIKIIAHFLYKKFKKTGIDVILDDRDERPGVMFNEVDLIGI 528

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLD----AIPILTK 643
           P  II   +  +  ++  R   +     +++ D     I  L K
Sbjct: 529 PHQIIISKRSINYDNVEYRERKNKENILINIKDIKNFIIQKLKK 572


>gi|283955965|ref|ZP_06373455.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336]
 gi|283792625|gb|EFC31404.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336]
          Length = 568

 Score =  130 bits (327), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 43/229 (18%), Positives = 92/229 (40%), Gaps = 11/229 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            T+          +++    H  L R      + + GSG+  +   G ++   + + ++ 
Sbjct: 3   FTKFYAPSLKEAPKDASLPSHIFLTRAG---FVEQIGSGLYNFLPLGKRVLDKIKNIVKE 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +E+N   +    LWQ+SG ++ +   +   K   +       F L P +    
Sbjct: 60  EMDKAGAQEVNLSFITPASLWQESGRYNVFGKELLRFKDRKEN-----EFVLGPTHEEAM 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           +++  + + SY++LP+ L + G  +R+E      GL+R R F   D + F   E+     
Sbjct: 115 LSLVKNKITSYKQLPLHLYQIGLKFRDEARPRF-GLLRCREFLMKDGYSFHANEEDLGRE 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
            + ++     I +  G +   V+  +      GS      A+N    +L
Sbjct: 174 FELMYKTYSQILQRMGLDFRAVEADSGAIGGSGSKEFMVLAKNGEDDIL 222



 Score = 81.4 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 30/165 (18%), Positives = 58/165 (35%), Gaps = 9/165 (5%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNLP 547
           +  + G I       S+         + K  P  +     G   R + + IE +      
Sbjct: 406 KGIEVGHIFKLGQKYSKAMNANFLDENGKSQPFYMGCYGIGVS-RLLAVAIEASHDEKGC 464

Query: 548 LW---LSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W   L+P    +         A+E+A ++   L +  L +  D RNE    K+ +  + 
Sbjct: 465 IWNKTLAPFVLEIIVSNLKDEKALEFANKLYEDLTNLGLEVLLDDRNERFGVKMNDFELM 524

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
             P  ++ G K      I   +      + +   + + IL K+ L
Sbjct: 525 GFPYALVIG-KGLENNEIEFIQREGLVKELIKTDELMEILKKKVL 568


>gi|268679949|ref|YP_003304380.1| prolyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
 gi|268617980|gb|ACZ12345.1| prolyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
          Length = 567

 Score =  130 bits (327), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 45/241 (18%), Positives = 92/241 (38%), Gaps = 11/241 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++          +++    H+ L R   +  +   GSG+  +   G  +   + + ++ 
Sbjct: 3   FSKLYAPTTKDAPKDATLPSHQYLVRGGFIVQV---GSGLYNFLPMGKIVLDKIRNVVKE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +   +EI    V    LW+QSG +D +   +  +K   +       F L P +    
Sbjct: 60  EMDETGAQEIQMGVVSPAELWKQSGRYDVFGKELCRIKDRKEN-----EFVLGPTHEEVV 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           V +  + + SY++LP+ L +  + +R+E      GL+R R F   D + F   E      
Sbjct: 115 VDIVRNRINSYKQLPLHLYQITTKFRDEARPRF-GLLRGREFIMKDGYSFHEDEASMKAE 173

Query: 405 LKIH-NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             +       I+   G +   V+  +      GS      A+N    ++   + S    I
Sbjct: 174 FDVMEQTYTKIFNRLGLDFRAVEADSGAIGGSGSKEFMVLAQNGEDDIVVCEQCSYAANI 233

Query: 464 N 464
            
Sbjct: 234 E 234



 Score = 88.7 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 65/163 (39%), Gaps = 11/163 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNL 546
           +  + G I Q+         A +++ +  K  P  +     G   R + +MIE +     
Sbjct: 405 KGIEVGHIFQLGQKYAKAMGATFLDKNG-KAQPFYMGCYGVGVS-RLVAVMIEASHDEKG 462

Query: 547 PLWLSPIQAIVTTI------TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
            +W       +  I        +   YA+EI + L    LS+  D RNE   +K++++ +
Sbjct: 463 CIWNKQTAPYLLDIIVSNSKDEAQSAYAEEIYSALMQERLSVLLDDRNERFGFKMKDYEL 522

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             +P  +I G KE  E  + I    +     V   +A+  L +
Sbjct: 523 IGLPYALIVG-KELEEGFVEIVERKTLEKTVVKKEEALLKLRE 564


>gi|57238257|ref|YP_178662.1| prolyl-tRNA synthetase [Campylobacter jejuni RM1221]
 gi|81819550|sp|Q5HVM3|SYP_CAMJR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|57167061|gb|AAW35840.1| prolyl-tRNA synthetase [Campylobacter jejuni RM1221]
          Length = 569

 Score =  130 bits (327), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 43/229 (18%), Positives = 92/229 (40%), Gaps = 11/229 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            T+          +++    H  L R      + + GSG+  +   G ++   + + ++ 
Sbjct: 4   FTKFYAPSLKEAPKDASLPSHIFLTRAG---FVEQIGSGLYNFLPLGKRVLDKIKNIVKE 60

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +E+N   +    LWQ+SG ++ +   +   K   +       F L P +    
Sbjct: 61  EMDKAGAQEVNLSFITPASLWQESGRYNVFGKELLRFKDRKEN-----EFVLGPTHEEAM 115

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           +++  + + SY++LP+ L + G  +R+E      GL+R R F   D + F   E+     
Sbjct: 116 LSLVKNKITSYKQLPLHLYQIGLKFRDEARPRF-GLLRCREFLMKDGYSFHANEEDLGRE 174

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
            + ++     I +  G +   V+  +      GS      A+N    +L
Sbjct: 175 FELMYKTYSQILQRMGLDFRAVEADSGAIGGSGSKEFMVLAKNGEDDIL 223



 Score = 79.1 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 59/165 (35%), Gaps = 9/165 (5%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNLP 547
           +  + G I       S+         + K  P  +     G   R + +  E +      
Sbjct: 407 KGIEVGHIFKLGQKYSKAMNANFLDENGKSQPFYMGCYGIGVS-RLLAVATEASHDEKGC 465

Query: 548 LW---LSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W   L+P    +         A+E+A ++   L +  L +  D RNE    K+ +  + 
Sbjct: 466 IWNKTLAPFVLEIIVSNLKDEKALEFANKLYEDLTNLGLEVLLDDRNERFGVKMNDFELM 525

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
             P  ++ G K   +  I + +      + +   + + IL K+ L
Sbjct: 526 GFPYALVVG-KGLEKNEIELIQREGLIKELIKTDELMEILKKKVL 569


>gi|227524393|ref|ZP_03954442.1| prolyl-tRNA synthetase [Lactobacillus hilgardii ATCC 8290]
 gi|227088624|gb|EEI23936.1| prolyl-tRNA synthetase [Lactobacillus hilgardii ATCC 8290]
          Length = 569

 Score =  130 bits (327), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 45/220 (20%), Positives = 93/220 (42%), Gaps = 11/220 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +       + +E   H+ L R   +  I+    G+  +    +++   + + +R++
Sbjct: 4   SKILVPTLKETPKGAEALSHKMLVRAGYIKQISA---GMYAYLPLAYRVLTKIETIVRQE 60

Query: 287 IKDD-YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++     E+  P VL   LW++SG +++Y   +F  K   DT      F L P +     
Sbjct: 61  MEKTSAHEMLMPDVLPAELWKESGRYETYGPELFKFKNRHDT-----DFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    +KSY++LP+ L +  + YR+E     +GL+R R F   DA+ F   E   ++  
Sbjct: 116 ELIRDSIKSYKQLPLILYQIQNKYRDEDRPR-YGLLRSREFIMKDAYSFAANEADLDDAY 174

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
           + +     +I+   G +  ++           S      A
Sbjct: 175 RAMEKAYRTIFDRIGLKYRVIIGDGGAMGGSDSKEFSAMA 214



 Score = 80.2 bits (196), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 34/165 (20%), Positives = 60/165 (36%), Gaps = 12/165 (7%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN--- 545
           R  + G I       S+     V   + +  PV++     G I R +  + E        
Sbjct: 404 RGIEIGHIFKLGTRYSKSLNANVLDENGRSIPVIMGSYGIG-ISRLLSAISEQNADENGL 462

Query: 546 -LPLWLSPIQAIVTTITSS---AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             P+ ++P    V  I       +  A +I   L  + + +  D R E    K  +  + 
Sbjct: 463 VWPVAVAPYTVHVIPINVKKEVQMNLANQIEEQLTENGIEVLVDDRRERPGVKFADSDLL 522

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA---IPILTK 643
            IP+ I  G K A E  + I+   +  T +  + +    + IL K
Sbjct: 523 GIPLRITVGKK-ADEGIVEIKIRKNGETVESKVEELSDTVKILLK 566


>gi|227510249|ref|ZP_03940298.1| prolyl-tRNA synthetase [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
 gi|227189901|gb|EEI69968.1| prolyl-tRNA synthetase [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
          Length = 569

 Score =  130 bits (327), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 52/266 (19%), Positives = 100/266 (37%), Gaps = 22/266 (8%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +       + +E   H+ L R   +  I+    G+  +    +++   + + +R++
Sbjct: 4   SKILVPTLKETPKGAEALSHKMLVRAGYIKQISA---GMYAYLPLAYRVLTKIETIVRQE 60

Query: 287 IKDD-YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++     E+  P VL   LW++SG +++Y   +F  K   DT      F L P +     
Sbjct: 61  MEKTSAHEMLMPDVLPAELWKESGRYETYGPELFKFKNRHDT-----DFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    +KSY++LP+ L +  + YR+E     +GL+R R F   DA+ F   E   ++  
Sbjct: 116 ELIRDSIKSYKQLPLVLYQIQNKYRDEDRPR-YGLLRSREFIMKDAYSFAANEADLDDAY 174

Query: 406 KIHNLIISIYKDF------------GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
           +          D             G               VG D +    E+     L+
Sbjct: 175 RAMEKAYRTIFDRIGLKYRVIIGDGGAMGGSDSKEFSAMAAVGEDTIVYSDESDYFANLE 234

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKF 479
             K+ + D  +T           P  
Sbjct: 235 MAKSKATDEPSTEAEADLKKVATPNV 260



 Score = 80.2 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/165 (20%), Positives = 60/165 (36%), Gaps = 12/165 (7%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN--- 545
           R  + G I       S+     V   + +  PV++     G I R +  + E        
Sbjct: 404 RGIEIGHIFKLGTRYSKSLNANVLDENGRSIPVIMGSYGIG-ISRLLSAISEQNADENGL 462

Query: 546 -LPLWLSPIQAIVTTITSS---AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             P+ ++P    V  I       +  A +I   L  + + +  D R E    K  +  + 
Sbjct: 463 VWPVAVAPYTVHVIPINVKKEVQMNLANQIEEQLTENGIEVLVDDRKERPGVKFADSDLL 522

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA---IPILTK 643
            IP+ I  G K A E  + I+   +  T +  + +    + IL K
Sbjct: 523 GIPLRITVGKK-ADEGIVEIKIRKNGETVESKVEELSDTVKILLK 566


>gi|205355399|ref|ZP_03222170.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8421]
 gi|205346633|gb|EDZ33265.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8421]
          Length = 569

 Score =  130 bits (327), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 43/229 (18%), Positives = 92/229 (40%), Gaps = 11/229 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            T+          +++    H  L R      + + GSG+  +   G ++   + + ++ 
Sbjct: 4   FTKFYAPSLKEAPKDASLPSHIFLTRAG---FVEQIGSGLYNFLPLGKRVLDKIKNIVKE 60

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +E+N   +    LWQ+SG ++ +   +   K   +       F L P +    
Sbjct: 61  EMDKAGAQEVNLSFITPASLWQESGRYNVFGKELLRFKDRKEN-----EFVLGPTHEEAM 115

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           +++  + + SY++LP+ L + G  +R+E      GL+R R F   D + F   E+     
Sbjct: 116 LSLVKNKITSYKQLPLHLYQIGLKFRDEARPRF-GLLRCREFLMKDGYSFHANEEDLGRE 174

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
            + ++     I +  G +   V+  +      GS      A+N    +L
Sbjct: 175 FELMYKTYSQILQRMGLDFRAVEADSGAIGGSGSKEFMVLAKNGEDDIL 223



 Score = 80.2 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/165 (18%), Positives = 60/165 (36%), Gaps = 9/165 (5%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNLP 547
           +  + G I       S+         + K  P  +     G   R + + IE +      
Sbjct: 407 KGIEVGHIFKLGQKYSKAMNANFLDENGKSQPFYMGCYGIGVS-RLLAVAIEASHDEKGC 465

Query: 548 LW---LSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W   L+P    +         A+E+A ++   L +  L +  D RNE    K+ +  + 
Sbjct: 466 IWNKTLAPFVLEIIVSNLKDEKALEFANKLYEDLTNLGLEVLLDDRNERFGVKMNDFELM 525

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
             P  ++ G K   +  I + +      + +   + + IL K+ L
Sbjct: 526 GFPYALVVG-KGLEKNEIELIQREGLIKELIKTDELMEILKKKVL 569


>gi|148925913|ref|ZP_01809600.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8486]
 gi|145844899|gb|EDK22003.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8486]
          Length = 576

 Score =  130 bits (327), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 43/229 (18%), Positives = 92/229 (40%), Gaps = 11/229 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            T+          +++    H  L R      + + GSG+  +   G ++   + + ++ 
Sbjct: 11  FTKFYAPSLKEAPKDASLPSHIFLTRAG---FVEQIGSGLYNFLPLGKRVLDKIKNIVKE 67

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +E+N   +    LWQ+SG ++ +   +   K   +       F L P +    
Sbjct: 68  EMDKAGAQEVNLSFITPASLWQESGRYNVFGKELLRFKDRKEN-----EFVLGPTHEEAM 122

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           +++  + + SY++LP+ L + G  +R+E      GL+R R F   D + F   E+     
Sbjct: 123 LSLVKNKITSYKQLPLHLYQIGLKFRDEARPRF-GLLRCREFLMKDGYSFHANEEDLGRE 181

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
            + ++     I +  G +   V+  +      GS      A+N    +L
Sbjct: 182 FELMYKTYSQILQRMGLDFRAVEADSGAIGGSGSKEFMVLAKNGEDDIL 230



 Score = 79.1 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 59/165 (35%), Gaps = 9/165 (5%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNLP 547
           +  + G I       S+         + K  P  +     G   R + +  E +      
Sbjct: 414 KGIEVGHIFKLGQKYSKAMNANFLDENGKSQPFYMGCYGIGVS-RLLAVATEASHDEKGC 472

Query: 548 LW---LSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W   L+P    +         A+E+A ++   L +  L +  D RNE    K+ +  + 
Sbjct: 473 IWNKTLAPFVLEIIVSNLKDEKALEFANKLYEDLTNLGLEVLLDDRNERFGVKMNDFELM 532

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
             P  ++ G K   +  I + +      + +   + + IL K+ L
Sbjct: 533 GFPYALVVG-KGLEKNEIELIQREGLIKELIKTDELMEILKKKVL 576


>gi|86151603|ref|ZP_01069817.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 260.94]
 gi|85841232|gb|EAQ58480.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 260.94]
          Length = 569

 Score =  130 bits (326), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 43/229 (18%), Positives = 92/229 (40%), Gaps = 11/229 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            T+          +++    H  L R      + + GSG+  +   G ++   + + ++ 
Sbjct: 4   FTKFYAPSLKEAPKDASLPSHIFLTRAG---FVEQIGSGLYNFLPLGKRVLDKIKNIVKE 60

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +E+N   +    LWQ+SG ++ +   +   K   +       F L P +    
Sbjct: 61  EMDKAGAQEVNLSFITPASLWQESGRYNVFGKELLRFKDRKEN-----EFVLGPTHEEAM 115

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           +++  + + SY++LP+ L + G  +R+E      GL+R R F   D + F   E+     
Sbjct: 116 LSLVKNKITSYKQLPLHLYQIGLKFRDEARPRF-GLLRCREFLMKDGYSFHANEEDLGRE 174

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
            + ++     I +  G +   V+  +      GS      A+N    +L
Sbjct: 175 FELMYKTYSQILQRMGLDFRAVEADSGAIGGSGSKEFMVLAKNGEDDIL 223



 Score = 82.1 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 59/165 (35%), Gaps = 9/165 (5%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNLP 547
           +  + G I       S+         + K  P  +     G   R + + IE N      
Sbjct: 407 KGIEVGHIFKLGQKYSKAMNANFLDENGKSQPFYMGCYGIGVS-RLLAVAIEANHDEKGC 465

Query: 548 LW---LSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W   L+P    +         A+E+A ++   L +  L +  D RNE    K+ +  + 
Sbjct: 466 IWNKTLAPFVLEIIVSNLKDEKALEFANKLYEDLTNLGLEVLLDDRNERFGVKMNDFELM 525

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
             P  ++ G K      I + +      + +   + + IL K+ L
Sbjct: 526 GFPYALVIG-KGLENNEIELIQREDLVKELIKTDELMEILKKKVL 569


>gi|86153499|ref|ZP_01071703.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni HB93-13]
 gi|85843225|gb|EAQ60436.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni HB93-13]
          Length = 569

 Score =  130 bits (326), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 43/229 (18%), Positives = 92/229 (40%), Gaps = 11/229 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            T+          +++    H  L R      + + GSG+  +   G ++   + + ++ 
Sbjct: 4   FTKFYAPSLKEAPKDASLPSHIFLTRAG---FVEQIGSGLYNFLPLGKRVLDKIKNIVKE 60

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +E+N   +    LWQ+SG ++ +   +   K   +       F L P +    
Sbjct: 61  EMDKAGAQEVNLSFITPASLWQESGRYNVFGKELLRFKDRKEN-----EFVLGPTHEEAM 115

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           +++  + + SY++LP+ L + G  +R+E      GL+R R F   D + F   E+     
Sbjct: 116 LSLVKNKITSYKQLPLHLYQIGLKFRDEARPRF-GLLRCREFLMKDGYSFHANEEDLGRE 174

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
            + ++     I +  G +   V+  +      GS      A+N    +L
Sbjct: 175 FELMYKTYSQILQRMGLDFRAVEADSGAIGGSGSKEFMVLAKNGEDDIL 223



 Score = 82.1 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 59/165 (35%), Gaps = 9/165 (5%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNLP 547
           +  + G I       S+         + K  P  +     G   R + + IE N      
Sbjct: 407 KGIEVGHIFKLGQKYSKAMNANFLDENGKSQPFYMGCYGIGVS-RLLAVAIEANHDEKGC 465

Query: 548 LW---LSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W   L+P    +         A+E+A ++   L +  L +  D RNE    K+ +  + 
Sbjct: 466 IWNKTLAPFVLEIIVSNLKDEKALEFANKLYEDLTNLGLEVLLDDRNERFGVKMNDFELM 525

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
             P  ++ G K      I + +      + +   + + IL K+ L
Sbjct: 526 GFPYALVIG-KGLENNEIELIQREDLVKELIKTDELMEILKKKVL 569


>gi|302390146|ref|YP_003825967.1| phosphoribulokinase/uridine kinase [Thermosediminibacter oceani DSM
           16646]
 gi|302200774|gb|ADL08344.1| phosphoribulokinase/uridine kinase [Thermosediminibacter oceani DSM
           16646]
          Length = 551

 Score =  130 bits (326), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 46/255 (18%), Positives = 97/255 (38%), Gaps = 9/255 (3%)

Query: 14  IKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAV 72
            +++    T  +++  +  + +    A  +  +V DL   +  +  IE +       + +
Sbjct: 10  ERSYEGPVTFLEISREVQAAFSSPVAAAVMGNRVYDLEHTLTGDADIEFLDLSTEIGMRI 69

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIAR 132
              +   I  +A   + P  +V +   I DG Y +   ++P   D++  IEK+M+E++ +
Sbjct: 70  YLRTLVFIFIKACGDVLPGSRVHVEHSIGDGIYCEVYWKEPIGEDDVESIEKRMRELVDK 129

Query: 133 DSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTG 192
           D P +K+ ++ E A   F+      KV +L+ +  K+ V +Y          G  + STG
Sbjct: 130 DIPIVKRRMAVEDAAIEFKKMGWDDKVRVLKYVK-KDYVDVYELDGLKGFFPGYLLPSTG 188

Query: 193 QVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES-------EKRD 245
            V+ F     + G   +                    ++ +                  D
Sbjct: 189 YVQWFKLKFYLPGIILQHPRPENPTELPTFKEQPKLFKVIRESERWAHILGVADAGALND 248

Query: 246 HRKLAREMDLFHIAE 260
           +    R  ++  IAE
Sbjct: 249 YITSGRAGEIIRIAE 263


>gi|124022453|ref|YP_001016760.1| prolyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303]
 gi|152112941|sp|A2C7N5|SYP_PROM3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|123962739|gb|ABM77495.1| Prolyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303]
          Length = 599

 Score =  130 bits (326), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 48/207 (23%), Positives = 84/207 (40%), Gaps = 8/207 (3%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +  +    SG+  +    W++ + + + ++ ++      E   PQ
Sbjct: 17  DAEIASHQLLLRGGYIRRV---TSGIYAYLPLMWRVLRKITAIVQEEMDATGALETLLPQ 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW++SG W  Y A    +   +D  +  R   L P +     ++    L+SYR+L
Sbjct: 74  LQPAELWRRSGRWQGYTAGEGLMFHLED--RQGRELGLGPTHEEVITSLAGDLLRSYRQL 131

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKD 417
           PV L +  S +R+E      GLMR R F   DA+ F   E         +      I+  
Sbjct: 132 PVTLYQIQSKFRDEIRPRF-GLMRGREFIMKDAYSFHACEADLAMTYTAMDEAYQRIFSR 190

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDA 444
            G E + V+  +       S      A
Sbjct: 191 CGLETVAVEADSGAIGGASSQEFMVTA 217



 Score = 87.9 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 65/163 (39%), Gaps = 9/163 (5%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF---KG 544
           R  + G I Q+         A + N    +  P  +     G        + ++      
Sbjct: 430 RGIEVGHIFQLGRKYSEALEACFTNDKGTQE-PFWMGCYGIGISRLAQAAVEQHHDEAGM 488

Query: 545 NLPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           N PL ++P + I+           + A+++ + L++  + +  D RNE    K ++  + 
Sbjct: 489 NWPLAIAPFEVIIVVANIQDEVQQKLAEQLYSELQAADIEVLLDDRNERAGVKFKDADLI 548

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            IP  I+ G ++A++  + + +  S   + +S   A   L +E
Sbjct: 549 GIPWRIVVG-RDAAKGQVELIQRSSRKVEILSATQAFTALVQE 590


>gi|162319780|ref|YP_422998.2| prolyl-tRNA synthetase [Magnetospirillum magneticum AMB-1]
 gi|114152208|sp|Q2W136|SYP_MAGMM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
          Length = 500

 Score =  130 bits (326), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 76/454 (16%), Positives = 159/454 (35%), Gaps = 73/454 (16%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++ + T      EE+    ++++ +  D+   +     ++     G+ I++ +   + R+
Sbjct: 2   SKAKKTAVTPTREENFPEWYQQVIKASDMAENSPVRGCMVI-KPWGYGIWEAIQRDLDRR 60

Query: 287 IKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDL---------RTFA 335
           IK+  +E    P  +     + ++ H + +   M  V       +D              
Sbjct: 61  IKETGHENCYFPLFIPLSFLEKEAAHVEGFAKEMAVVTHHRLVAEDGKLVPSGKLEEPLV 120

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-F 394
           ++P +       F   ++SYR+LP+ + ++ +V R E        +R   F   + H   
Sbjct: 121 VRPTSETIIGDAFARWIQSYRDLPMLVNQWANVVRWEMRP--RIFLRTAEFLWQEGHTAH 178

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDT 454
            T E+  +E LK+  +   + ++     ++V      E+  G+D  +             
Sbjct: 179 ATAEEAMDETLKMLEVYRVMAEEVLAMPVIVGEKPAHERFPGADKTYS------------ 226

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH 514
                                    E +++D  G+  Q GT        S+  A  +   
Sbjct: 227 ------------------------IEAMMQD--GKALQAGTSHFLGQHFSK--AQNIRYQ 258

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTITSS------A 564
           + +      +   +G   R IG +I +   +    +P  ++P Q +   IT +       
Sbjct: 259 TAQGGEEFCYTTSWGVSTRLIGGVIMSHADDNGLRVPPRIAPKQIVFVPITRADGDEALI 318

Query: 565 VEYAQEIANLLKSH-----HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSI 619
            ++   I   L +       L +  D R      K  E   K  PII   G ++ +  S+
Sbjct: 319 EDFLAPIVKDLSAQSFGGERLRVHVDRRPLAPPEKRWEWVKKGAPIICEVGPRDVAGGSV 378

Query: 620 G-IRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
             IRR G    Q     + +      ++  D QK
Sbjct: 379 AMIRRDGELKGQITPKDELVSR--AAAILEDIQK 410


>gi|283954167|ref|ZP_06371692.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414]
 gi|283794446|gb|EFC33190.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414]
          Length = 568

 Score =  130 bits (326), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 47/268 (17%), Positives = 99/268 (36%), Gaps = 23/268 (8%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            T+          +++    H  L R      + + GSG+  +   G ++   + + ++ 
Sbjct: 3   FTKFYAPSLKEAPKDAILPSHIFLTRAG---FVEQIGSGLYNFLPLGKRVLDKIKNIVKE 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +E+N   +    LWQ+SG ++ +   +   K   +       F L P +    
Sbjct: 60  EMDKAGAQEVNLSFITPASLWQESGRYNVFGKELLRFKDRKEN-----EFVLGPTHEEAM 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           +++  + + SY++LP+ L + G  +R+E      GL+R R F   D + F   E+     
Sbjct: 115 LSLVKNKITSYKQLPLHLYQIGLKFRDEARPRF-GLLRCREFLMKDGYSFHANEEDLERE 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL------DTIKN 457
            + ++     I +  G +   V+ ++      GS      A+N    +L           
Sbjct: 174 FELMYQTYSQILQRMGLDFRAVEANSGAIGGSGSKEFMVLAKNGEDDILICENCDYAANV 233

Query: 458 SSQDRINTGVLLGE------GAFYGPKF 479
            +  R+                FY P  
Sbjct: 234 EAAKRVKKTCQDERPEANYASKFYTPNI 261



 Score = 85.2 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 33/165 (20%), Positives = 62/165 (37%), Gaps = 9/165 (5%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNLP 547
           +  + G I       S+         + K  P  +     G I R + + IE N      
Sbjct: 406 KGIEVGHIFKLGQKYSKAMNANFLDENGKSQPFYMGCYGIG-ISRLLAVAIEANHDEKGC 464

Query: 548 LW---LSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W   L+P    +         A+E+A ++   L    L +  D RNE    K+ +  + 
Sbjct: 465 IWNKVLAPFVLEIIVSNIKDEKALEFANKLYEDLTKLGLEVLLDDRNERFGVKMNDFELM 524

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
             P  ++ G K      + + +  + T + V + + + IL K+ L
Sbjct: 525 GFPYALVIG-KGLENNEVELIQREALTKELVKIDELMEILKKKVL 568


>gi|52080260|ref|YP_079051.1| prolyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52785637|ref|YP_091466.1| prolyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|319645960|ref|ZP_08000190.1| prolyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
 gi|81825303|sp|Q65JJ1|SYP_BACLD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|52003471|gb|AAU23413.1| prolyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52348139|gb|AAU40773.1| ProS [Bacillus licheniformis ATCC 14580]
 gi|317391710|gb|EFV72507.1| prolyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
          Length = 572

 Score =  130 bits (326), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 47/249 (18%), Positives = 98/249 (39%), Gaps = 11/249 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++E + H+ L R      I ++ SGV  +     K+   + S +R +
Sbjct: 4   SRTLIPTLREVPADAEAKSHQLLLRAG---FIRQNTSGVYSYMPLANKVIHKIQSIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++  +  E+  P +     WQ+SG W +Y   +  +K      +  R FAL   +     
Sbjct: 61  MEKINAVEMLMPALQQAETWQESGRWYTYGPELMRLKD-----RHGREFALGATHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNEC 404
           ++    +KSY+ LP+ L +  S +R+E      GL+R R F   DA+ F  + E +    
Sbjct: 116 SIVRDEVKSYKRLPLTLYQIQSKFRDEKRPRF-GLLRGREFIMKDAYSFHSSAESLDETY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
             ++    +++   G     V   +       +      ++     +  + ++S    I 
Sbjct: 175 NDMYQAYTNVFTRCGLNFRPVIADSGAMGGKDTHEFMALSDVGEDTIAYSDQSSYAANIE 234

Query: 465 TGVLLGEGA 473
              +    A
Sbjct: 235 MAEVKETDA 243



 Score = 77.5 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 20/153 (13%), Positives = 58/153 (37%), Gaps = 8/153 (5%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI- 556
           +        +A Y++ +  +  P+++     G       I+ ++      +W   +    
Sbjct: 414 LGTRYSEAMDATYLDENG-RAQPMLMGCYGIGISRTLSAIVEQHHDDKGLIWPLEVTPYD 472

Query: 557 -----VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
                +     + V+ A+++    K++   +  D R E    K  +  +  +PI I  G 
Sbjct: 473 LHILALNMKNDAQVQLAEKLYEEFKANGYDVLFDDRAERAGVKFADSDLIGLPIRITVGK 532

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           + A E  + ++   +  + +++  +    + K+
Sbjct: 533 R-ADEGVVEVKIRKTGESFEIAADELFDFIEKQ 564


>gi|103486717|ref|YP_616278.1| prolyl-tRNA synthetase [Sphingopyxis alaskensis RB2256]
 gi|122985087|sp|Q1GTS7|SYP_SPHAL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|98976794|gb|ABF52945.1| prolyl-tRNA synthetase [Sphingopyxis alaskensis RB2256]
          Length = 527

 Score =  130 bits (326), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 60/400 (15%), Positives = 130/400 (32%), Gaps = 74/400 (18%)

Query: 270 RKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKC---- 323
             G+ I++ + + M   I     +    P  +    ++ ++ H D +   M  V      
Sbjct: 60  PWGYGIWERIQTVMDAAIKDAGVQNAYFPLFIPLSFFEKEADHVDGFAKEMAVVTHHRLI 119

Query: 324 --------ADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
                    D   K      ++P +     A  +  ++S+R+LP+++ ++ +V R E   
Sbjct: 120 ADSKGKLVPDPEAKLEEPLIVRPTSETVIGAAMSRWVQSWRDLPLKVNQWANVVRWEMR- 178

Query: 376 SLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
                +R   F   + H      +    E L+   +  S                     
Sbjct: 179 -TRMFLRTSEFLWQEGHTAHADRDDAMAETLRALEMYRSF-------------------- 217

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
                    AE+++   +   +    +R         GA      E +++D  G+  Q G
Sbjct: 218 ---------AEDVLAMPVIAGEKPENERFP-------GAVATYSIEAMMQD--GKALQAG 259

Query: 495 TIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLW 549
           T               Y +         + H   +G+  R IG +I    ++     P  
Sbjct: 260 TSHYLGTGFAEAAGIRYQDRDG---GHSLCHTTSWGTSTRMIGGVIMTHGDDDGLRCPPR 316

Query: 550 LSPIQAIVTTITSSA------VEYAQEIANLLKSHH-----LSIETDFRNETINYKIREH 598
           ++P Q ++  +          ++Y +++ + LK+       + +  D        K    
Sbjct: 317 IAPHQIVIVPMLRDNGEDAAILDYCRDLESRLKALDAFGEPVRVLLDTGANKAQTKRWGW 376

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
             K  PII+  G ++ +  ++ + R      +   L  A 
Sbjct: 377 VKKGAPIIVEVGPRDVAGGNVAVIRRDRLYQESGKLNSAF 416


>gi|217076405|ref|YP_002334121.1| prolyl-tRNA synthetase [Thermosipho africanus TCF52B]
 gi|226701439|sp|B7IFB6|SYP_THEAB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|217036258|gb|ACJ74780.1| prolyl-tRNA synthetase [Thermosipho africanus TCF52B]
          Length = 561

 Score =  130 bits (326), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 52/244 (21%), Positives = 91/244 (37%), Gaps = 13/244 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++           ++E      L R   +  IA    GV  +     +    + + +R 
Sbjct: 3   FSRLYAPTLREDPSDAEIPSQALLQRAGFIRKIAA---GVYTYLPLARRTLLKIENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +EI  P +    LWQ+SG WD Y   M  +K      +  R F L P +    
Sbjct: 60  EMDKIGAQEILMPIIQPAELWQRSGRWDDYGPEMMKLKD-----RHNRDFTLGPTHEELV 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + L SY++LPV L +  + +R+E       L R R F   DA+ F    +  +E 
Sbjct: 115 TELIRNELNSYKQLPVSLYQITTKFRDEIRPRFGVL-RAREFIMKDAYSFHDSWESLDET 173

Query: 405 LKIH-NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL--DTIKNSSQD 461
            ++  +    I +  G    +++ +T       S      A      VL  D     S +
Sbjct: 174 YQLFKDAYSKIMERIGLRYSVIEAATGAIGGNESHEFVAFANTGESNVLYCDCGYAGSDE 233

Query: 462 RINT 465
           R+  
Sbjct: 234 RVPY 237



 Score = 63.6 bits (153), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 22/134 (16%), Positives = 49/134 (36%), Gaps = 6/134 (4%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL---SPIQ 554
           +        +  Y++   +    +M     +G       I+ +    +  +W    +P +
Sbjct: 412 LGTKYSDSMDVKYMDKDGKMKSFIM-GCYGWGISRTLGAIVEQLHDDDGIIWPRSVAPYE 470

Query: 555 A-IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
             IV        E+++++ + L    + +  D RN +   K ++  +   PI I  G K 
Sbjct: 471 VDIVVVGKEKEKEFSEKLYSYLLDKGVDVIIDDRNVSPGVKFKDADLIGFPIRITVGRK- 529

Query: 614 ASERSIGIRRFGST 627
             E  + I+  G  
Sbjct: 530 LKEGKVEIKERGKE 543


>gi|301168478|emb|CBW28068.1| proline tRNA synthetase [Bacteriovorax marinus SJ]
          Length = 573

 Score =  130 bits (326), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 48/187 (25%), Positives = 74/187 (39%), Gaps = 10/187 (5%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DD 290
             Y     ++E   H+ + R      I + GSG+  +   G++  + +   +R ++    
Sbjct: 9   QTYKEVPADAEIPSHQLMVRAG---LIHKMGSGLYSYLPFGYRSIRKVEQIIREELDKAG 65

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH 350
             EI    V    LWQ+SG WD+    M  VK      K  R   L P N      +F  
Sbjct: 66  CHEILMSMVTPGELWQESGRWDAMGDQMLKVKD-----KGGRDLCLSPTNEEAVTDIFRK 120

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
            +KSY+ LPV L +  + +R+E      GLMR R FT  D + F   +   +E       
Sbjct: 121 TIKSYKNLPVTLYQINTKFRDELRPRF-GLMRGREFTMKDGYSFHIDKDSLDEVYDRIFK 179

Query: 411 IISIYKD 417
                  
Sbjct: 180 AYEAIFT 186



 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/164 (18%), Positives = 67/164 (40%), Gaps = 8/164 (4%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           I R  + G I Q+            ++S+ +  +P+M      G        + ++    
Sbjct: 407 IRRGIEVGHIFQLGDKYTKAMGTTVLDSNGKAMNPLM-GCYGIGVTRVVAAAVEQHHDDK 465

Query: 546 LPLW---LSPIQAIVTTITSSAV--EYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
             +W   L+P       IT SA   E A++I N +   ++ +  D R     +K ++  +
Sbjct: 466 GIVWPMALAPYHVYFAEITKSAENKELAEKIYNEILEANIEVVFDDRKAGPGFKFKDADL 525

Query: 601 KKIPIIIICGDKE-ASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             +P+ ++ G+++   +  + IR   +  + KV   D +  L +
Sbjct: 526 LGLPLQLVFGERDFKKDGMLEIRIRKTGESLKVKPEDVVSKLQE 569


>gi|162452041|ref|YP_001614408.1| prolyl-tRNA synthetase [Sorangium cellulosum 'So ce 56']
 gi|161162623|emb|CAN93928.1| proS [Sorangium cellulosum 'So ce 56']
          Length = 518

 Score =  130 bits (326), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 63/438 (14%), Positives = 142/438 (32%), Gaps = 75/438 (17%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
             E     ++++ R  DL   +     ++     G+ I++ +   +    K   ++    
Sbjct: 15  RNEDYPEWYQQVVRAADLAESSPVRGCMVI-KPWGYAIWENIQRELDSMFKATGHKNAYF 73

Query: 297 PQVLDQHLWQ-QSGHWDSYRANMFAVKC------------ADDTIKDLRTFALKPMNCPG 343
           P  + +   + ++ H + +      V               D   +      ++P +   
Sbjct: 74  PLFIPKSFLEKEAEHVEGFAKECAVVTHHRLVPGPGGGLIPDPQARLEEPLIVRPTSETI 133

Query: 344 HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN- 402
             A F   ++SYR+LP+ + ++ +V R E        +R   F   + H     E     
Sbjct: 134 IGAAFASWVQSYRDLPLLINQWANVVRWELR--TRLFLRTAEFLWQEGHTAHASEAEARE 191

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
           E L++  +  +  +DF    ++    T  E+                             
Sbjct: 192 ETLRMLGVYATFARDFMAMPVLEGPKTASERF---------------------------- 223

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
                    GA      E +++D   +  Q GT        ++  A  +   +++     
Sbjct: 224 --------PGAVDTYAIEAMMQDR--KALQAGTSHFLGQNFAK--ASGIKFQTKEETEEH 271

Query: 523 IHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTIT------SSAVEYAQEIA 572
                +G   R +G +I    ++    LP  L+P   ++  +       +   EY   +A
Sbjct: 272 AWTTSWGVSTRLVGGLIMTHSDDDGLVLPPRLAPAHVVILPVYRGDDTRAKIDEYIDGLA 331

Query: 573 NLLKSH--HLS---IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS- 626
             L++         +E D R+     K  E   K +P+ I  G ++       + R    
Sbjct: 332 KELRAQRFGERRVEVEIDRRDIRGGDKQWEWVKKGVPLRIEIGPRDVDAGVAMVMRRDRS 391

Query: 627 -TTTQKVSLLDAIPILTK 643
                 ++  + +  +T+
Sbjct: 392 PKDKSSMARGELVGRVTE 409


>gi|257066241|ref|YP_003152497.1| prolyl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
 gi|256798121|gb|ACV28776.1| prolyl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
          Length = 572

 Score =  130 bits (326), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 46/221 (20%), Positives = 92/221 (41%), Gaps = 11/221 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++E   H+ L R      I +  SGV  +   G K+   + + +R  
Sbjct: 4   SKYYMPTLREDPVDAETASHKFLTRGA---FIRKQASGVYSFLPLGKKVINKIEAIVREA 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +++ D  E++T  +  + +W+ SG W+++   MF +K   D     R + L P       
Sbjct: 61  MENHDSIEVSTSILQAREIWEASGRWETFGPEMFKLKDRHD-----REYCLGPTAEEAFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
           A+    L SY++LP+ + +    +R+E      G+ R R F   DA+ F    E +    
Sbjct: 116 ALVKDELNSYKQLPLNIYQIVDKFRDEKRPRF-GINRSRDFLMKDAYSFDADIEGLEISY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
            K+ +  +  +   G +  +V+  +       S      +E
Sbjct: 175 QKMWDAYVEAFDKMGLDYKIVEGDSGTMGGKKSHEFIALSE 215



 Score = 81.4 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 69/188 (36%), Gaps = 13/188 (6%)

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
            G+ A+ G     +LK A G +      Q+         A++++ +  K  P ++     
Sbjct: 389 EGDMAYDG---SGMLKAARGIEV-GNIFQLGTKYSESLEAYFLDENG-KQKPFIMGSYGI 443

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQ-----AIVTTIT-SSAVEYAQEIANLLKSHHLSI 582
           G       I+ +       +W + +        +  I      E  ++I   L+   + +
Sbjct: 444 GISRSVSAIVEQYHDDKGIVWPTSVAPFEAIVTIININKDEQKELGEKIYQRLREERIDV 503

Query: 583 ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             D R E    K  +  +  IP  I  G K+A++  +          +K+S  +AI  + 
Sbjct: 504 ILDDRKERAGVKFNDRDLIGIPYRITVG-KDAADDIVEYSTRKDMENEKISSSEAIEKIV 562

Query: 643 KESLPPDC 650
            +S+  D 
Sbjct: 563 -DSIKKDL 569


>gi|149184542|ref|ZP_01862860.1| prolyl-tRNA synthetase [Erythrobacter sp. SD-21]
 gi|148831862|gb|EDL50295.1| prolyl-tRNA synthetase [Erythrobacter sp. SD-21]
          Length = 513

 Score =  130 bits (326), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 59/387 (15%), Positives = 129/387 (33%), Gaps = 74/387 (19%)

Query: 270 RKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKC---- 323
             G+ I++ +   +  +IK   +E    P  +    ++ ++ H + +   M  V      
Sbjct: 43  PWGFGIWERMQRLLDDRIKATGHENAYFPIFIPLSNFEREAEHVEGFAKEMAVVTHHRLI 102

Query: 324 --------ADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
                    D   K      ++P +           ++S+R+LP++L ++ +V R E   
Sbjct: 103 AGKDGGLVPDPEAKLEEPLVVRPTSETIIGDAMARWIQSWRDLPLKLNQWANVVRWEMR- 161

Query: 376 SLHGLMRVRGFTQDDAHVFCTKE-QMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
                +R   F   + H     E +     L++  +  +   +     ++       E+ 
Sbjct: 162 -TRMFLRTSEFLWQEGHTAHADEVEAKEHTLRMLEVYRAFADEDLALAVVPGEKPENERF 220

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
            G+   W                                      E +++D  G+  Q G
Sbjct: 221 PGAVETWS------------------------------------IEAMMQD--GKALQAG 242

Query: 495 TIQVDFNLPSRF-NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLW 549
           T      L + F  A  +   +++      H   +G   R +G +I    ++    LP  
Sbjct: 243 TSHY---LGTNFAKASGIKYQNKEGGETFAHTTSWGVSTRMVGGVIMTHGDDDGLRLPPK 299

Query: 550 LSPIQAIVTTI------TSSAVEYAQEIANLLKSHHL-----SIETDFRNETINYKIREH 598
           ++P Q ++  +        + +EY + +   L S  +      +  D R      K  ++
Sbjct: 300 IAPQQVVILPMLRDKPEDDALIEYCEALRATLASQQVLGEPLRVLLDTRPGKAAQKRWDY 359

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFG 625
             K  PII+  G ++     + + R  
Sbjct: 360 VRKGAPIIVEVGGRDMENGVVSMLRRD 386


>gi|220915162|ref|YP_002490466.1| prolyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219953016|gb|ACL63400.1| prolyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 508

 Score =  130 bits (326), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 68/446 (15%), Positives = 141/446 (31%), Gaps = 73/446 (16%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
             E+    + ++ +  DL   +     ++     G+ +++ +   +    K   +     
Sbjct: 12  RAENFSEWYLEVIKAADLAESSTVRGCMVI-KPWGYALWEHVQRVLDGMFKATGHVNAYF 70

Query: 297 PQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDL---------RTFALKPMNCPGHVA 346
           P  +   L + ++ H + +      V       +D              ++P +      
Sbjct: 71  PLFIPLSLLEKEAAHVEGFAKECAVVTHHRLEARDGKLVPVGELEEPLVVRPTSETIIGE 130

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
            F   ++SYR+LP+ + ++ +V R E        +R   F   + H     EQ       
Sbjct: 131 SFARWVQSYRDLPLLINQWANVVRWEMR--TRMFLRTAEFLWQEGHTAHATEQEA----- 183

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
               I    +  G                        AE  M   +   + ++ +R    
Sbjct: 184 ----IDETMQMLGIYARF-------------------AEEWMALPVVQGEKTASERFP-- 218

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
                GA      E +++D   +  Q GT        +R  A  +    EK         
Sbjct: 219 -----GAVRTYCIEAMMQDR--KALQAGTSHFLGQNFAR--ASGIQFQDEKGALTHAWTT 269

Query: 527 VFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSS------AVEYAQEIANLLK 576
            +G   R IG MI    ++     P  L+P Q ++  +          + +  E+   L+
Sbjct: 270 SWGLSTRMIGAMIMTHGDDDGMVCPPRLAPQQVVIIPVIQKPEVREQVLAWCAELKRELE 329

Query: 577 S-----HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI--RRFGSTTT 629
           +       + +  D R+     K  E   K  PI +  G K+  + ++ +  R       
Sbjct: 330 AQSYAGAPVRVHLDARDVQGAKKSWEWIKKGAPIRLEVGPKDIEKGAVFMGRRDRKPREK 389

Query: 630 QKVSLLDAIP---ILTKESLPPDCQK 652
           Q V   + +     L +E      ++
Sbjct: 390 QSVPRGELVAGVGALLQEIQDALLRR 415


>gi|307179779|gb|EFN67969.1| Probable prolyl-tRNA synthetase, mitochondrial [Camponotus
           floridanus]
          Length = 422

 Score =  129 bits (325), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 77/411 (18%), Positives = 149/411 (36%), Gaps = 38/411 (9%)

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
            R H+ + +      I     G+      G ++   LI+ + +++ +   E+I  P +  
Sbjct: 22  SRSHKLMIKYG---IIKPCNVGMYALLPLGMRVLNKLINLVDKEMTNLGAEKILLPALTS 78

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH-GLKSYRELPV 360
             LW+++  +DS +  +F +K      +  + + L P        + +  G  S + LP+
Sbjct: 79  TSLWKKTNRYDSNKNELFTIKD-----RHEKEYILSPTYEEAICDLISSTGSLSTKLLPL 133

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFG 419
           RL +  S +R+E    L G +R R F   D + F T  +        +     +I+K  G
Sbjct: 134 RLYQISSKWRDEMKPRL-GFLRSREFIMKDLYTFDTNLDNAQYTYDLVCESYNNIFKQIG 192

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
            +   V         + S      + NI + V+    +     IN  +            
Sbjct: 193 IKYEKVIGDVGTIGGLISHEYHYIS-NIGEDVILQCPSCY-FSINQTISKTTNC------ 244

Query: 480 EYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
               K+ + R            N+        +     +  PV++     G + R I + 
Sbjct: 245 -PQCKNELQRHIAAEIGHTFLLNIKYSQPLKAMYVEQNELKPVVMGCFGLG-LSRIIMLT 302

Query: 539 IEN----FKGNLPLWLSPIQAIVTT-----ITSSAVEYAQEIANLLKSHHLSIETDFRNE 589
           IE      +   P+ L+P    +          ++ +Y ++++ +L    +    D R  
Sbjct: 303 IEILSTINEIRWPVKLAPYTVCIIPPKAGSKEENSSKYIEQLSEILCKRDIDTVLDDRTH 362

Query: 590 -TINYKIREHSIKKIPIIIICGDKEASERSI---GIRRFGSTTTQKVSLLD 636
            TI  +         P III G   AS RSI    +    ++ T ++SL  
Sbjct: 363 LTIGKRFVLARALGFPYIIIIGK--ASTRSIPSFEVHDINNSVTNELSLEQ 411


>gi|289524208|ref|ZP_06441062.1| proline--tRNA ligase [Anaerobaculum hydrogeniformans ATCC BAA-1850]
 gi|289502864|gb|EFD24028.1| proline--tRNA ligase [Anaerobaculum hydrogeniformans ATCC BAA-1850]
          Length = 481

 Score =  129 bits (325), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 70/430 (16%), Positives = 154/430 (35%), Gaps = 64/430 (14%)

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK 288
            ++ + +   E+   + +  + +  ++   A     ++     G+ I++++ S +  + K
Sbjct: 1   MKMARNITPREKDYSQWYLDVIKAAEMADYAPVRGCMVI-RPTGYAIWESIQSQLDERFK 59

Query: 289 D-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA 346
           +  +     P ++     + ++ H + +      V  A     +     ++P +      
Sbjct: 60  ETGHVNAYFPLLIPSSFLEKEAKHVEGFSPECAVVTYAGGEELE-EPLVIRPTSETVIGH 118

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECL 405
           +++  ++S+R+LP+ + ++ +V R E    L   +R   F   + H    T+E+   E L
Sbjct: 119 MYSKWIQSWRDLPILINQWCNVLRWEKRPRL--FLRTSEFLWQEGHTAHATREEALEETL 176

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
           ++  +  S                               E ++   + T + S  +R   
Sbjct: 177 RMLEVYRSFM-----------------------------EEVLALPVLTGEKSEGERFP- 206

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIH 524
                 GA      E ++ D   R  Q GT   +  N    F+  + N   E  +     
Sbjct: 207 ------GAENTYTCEAMMTD--KRALQAGTSHFLGQNFAKAFDIRFQNKDGELEYA---W 255

Query: 525 RAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTITSSA-------VEYAQEIAN 573
              +G   R IG +I     N    LP  ++P++ ++  IT          +  AQ+I  
Sbjct: 256 TTSWGVSTRLIGAIIMTHADNDGLVLPPNVAPVKTVILPITPDQNLLQEKILPEAQKILE 315

Query: 574 LLKS-HHL-SIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
            LK       +  D + +     +   H  K +P+ +  G+ E     +   R  +    
Sbjct: 316 RLKKILGANRVILDTQFHMRPGDRFFYHLQKGVPLRLELGEAEMKSSHLRAVRRDTGEVV 375

Query: 631 KVSLLDAIPI 640
            +S  DAI  
Sbjct: 376 NISF-DAIER 384


>gi|227499759|ref|ZP_03929859.1| proline--tRNA ligase [Anaerococcus tetradius ATCC 35098]
 gi|227218145|gb|EEI83411.1| proline--tRNA ligase [Anaerococcus tetradius ATCC 35098]
          Length = 572

 Score =  129 bits (325), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 46/221 (20%), Positives = 91/221 (41%), Gaps = 11/221 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++E   H+ L R      I +  SGV  +   G K+   + + +R  
Sbjct: 4   SKYYMPTLRQDPVDAETESHKFLTRGG---FIRKQASGVYSFLPLGKKVVNKIEAIVREA 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++D D  E++T  +  + +W+ SG W+++   MF +K   D     R + L P       
Sbjct: 61  MEDYDSIEVSTSILQTREIWEASGRWETFGPEMFKIKDRHD-----REYCLGPTAEESFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
           ++    L SY++LP+ + +    +R+E      G+ R R F   DA+ F    E +    
Sbjct: 116 SLIKDELNSYKQLPLNIYQIVDKFRDEKRPRF-GINRSRDFLMKDAYSFDKDMEGLEVSY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
            K+ +     +   G +  +V+  +       S      +E
Sbjct: 175 QKMWDAYEQAFDRMGLDYKIVEGDSGSMGGKKSHEFIALSE 215



 Score = 71.0 bits (172), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 63/174 (36%), Gaps = 12/174 (6%)

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG 529
           G+ A+ G      LK+A G +      Q+         A++++ + ++   +M    + G
Sbjct: 390 GDMAYDGSGI---LKEARGIEV-GNIFQLGTKYSDSLGAYFLDENGKQQAFIMGSYGI-G 444

Query: 530 SIERFIGIMIENFKGNLPLWLSPIQA------IVTTITSSAVEYAQEIANLLKSHHLSIE 583
                  I+ +       +W + +        IV        E  ++I   LK   + + 
Sbjct: 445 ITRSVSAIVEQYHDDKGIIWPTSVAPFEAIVTIVNINNEEQKELGEKIYKRLKEERIDVL 504

Query: 584 TDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
            D R E    K  +  +  IP  I  G K+AS+  +          +K++   A
Sbjct: 505 LDDRKERAGVKFNDRDLIGIPYRITVG-KDASDDIVEYSTRALMENEKITSDQA 557


>gi|167005199|ref|ZP_02270957.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176]
          Length = 568

 Score =  129 bits (325), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 43/229 (18%), Positives = 92/229 (40%), Gaps = 11/229 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            T+          +++    H  L R      + + GSG+  +   G ++   + + ++ 
Sbjct: 3   FTKFYAPSLKEAPKDASLPSHIFLTRAG---FVEQIGSGLYNFLPLGKRVLDKIKNIVKE 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +E+N   +    LWQ+SG ++ +   +   K      +    F L P +    
Sbjct: 60  EMDKAGAQEVNLSFITPASLWQESGRYNVFGKELLRFKD-----RKKNEFVLGPTHEEAM 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           +++  + + SY++LP+ L + G  +R+E      GL+R R F   D + F   E+     
Sbjct: 115 LSLVKNKITSYKQLPLHLYQIGLKFRDEARPRF-GLLRCREFLMKDGYSFHANEEDLGRE 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
            + ++     I +  G +   V+  +      GS      A+N    +L
Sbjct: 174 FELMYKTYSQILQRMGLDFRAVEADSGAIGGSGSKEFMVLAKNGEDDIL 222



 Score = 82.1 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 59/165 (35%), Gaps = 9/165 (5%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNLP 547
           +  + G I       S+         + K  P  +     G   R + + IE N      
Sbjct: 406 KGIEVGHIFKLGQKYSKAMNANFLDENGKSQPFYMGCYGIGVS-RLLAVAIEANHDEKGC 464

Query: 548 LW---LSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W   L+P    +         A+E+A ++   L +  L +  D RNE    K+ +  + 
Sbjct: 465 IWNKTLAPFVLEIIVSNLKDEKALEFANKLYEDLTNLGLEVLLDDRNERFGVKMNDFELM 524

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
             P  ++ G K      I + +      + +   + + IL K+ L
Sbjct: 525 GFPYALVIG-KGLENNEIELIQREDLVKELIKTDELMEILKKKVL 568


>gi|257459695|ref|ZP_05624804.1| prolyl-tRNA synthetase [Campylobacter gracilis RM3268]
 gi|257443120|gb|EEV18254.1| prolyl-tRNA synthetase [Campylobacter gracilis RM3268]
          Length = 572

 Score =  129 bits (325), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 45/241 (18%), Positives = 87/241 (36%), Gaps = 11/241 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++           ++    H  L R      I + GSG+  +   G  + + + + +R+
Sbjct: 3   FSKLFAPSLKEAPRDAVLPSHALLIRAG---FIEQLGSGLYNFLPLGKIVLERICAVIRQ 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +E++   V     W++SG +  Y   +   K   D       F L P N    
Sbjct: 60  EMDAAGAQEVSFSVVTSADAWKKSGRYAKYGKELLRFKDRKDN-----DFVLSPTNEEAA 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           V +    + SY++LP+ + +  + +R+E      GL+R R FT  DA+ F          
Sbjct: 115 VLMVADKITSYKQLPLNIYQINTKFRDEARPRF-GLLRGREFTMKDAYSFHADAADMKRE 173

Query: 405 LKIH-NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            ++       I+   G     V   +      GS      A+N    ++   +      I
Sbjct: 174 FEVMRQAYSRIFTRLGLNFRTVDADSGAIGGSGSKEFMVLADNGEDDIVVCKRCEYAANI 233

Query: 464 N 464
            
Sbjct: 234 E 234



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 63/163 (38%), Gaps = 11/163 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           +  + G I Q+         A +++++  K     +     G+  R I + IE+      
Sbjct: 407 KGIEVGHIFQLGTRYSEPMGARFLDANG-KARAFYMGCYGIGAS-RLIAVAIESSHDERG 464

Query: 546 --LPLWLSPIQAIVTTITSS---AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              P  L+P +  +         AVE+A+++    +   + +  D R E    K+ +  +
Sbjct: 465 CVWPRELAPFELEIIISNHKDAAAVEFAEKLYEQCRERGIRVLLDDRAERFGVKMNDFEL 524

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              P  ++ G K  +ERS+          Q VS  + +  + +
Sbjct: 525 MGFPYAVLVG-KALAERSVEFITRAGLKRQSVSADEILSFIER 566


>gi|315930573|gb|EFV09608.1| Proline-tRNA ligase [Campylobacter jejuni subsp. jejuni 305]
          Length = 220

 Score =  129 bits (325), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 42/223 (18%), Positives = 90/223 (40%), Gaps = 11/223 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            T+          +++    H  L R      + + GSG+  +   G ++   + + ++ 
Sbjct: 3   FTKFYAPSLKEAPKDASLPSHIFLTRAG---FVEQIGSGLYNFLPLGKRVLDKIKNIVKE 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +E+N   +    LWQ+SG ++ +   +   K   +       F L P +    
Sbjct: 60  EMDKAGAQEVNLSFITPASLWQESGRYNVFGKELLRFKDRKEN-----EFVLGPTHEEAM 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           +++  + + SY++LP+ L + G  +R+E      GL+R R F   D + F   E+     
Sbjct: 115 LSLVKNKITSYKQLPLHLYQIGLKFRDEARPRF-GLLRCREFLMKDGYSFHANEEDLGRE 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
            + ++     I +  G +   V+  +      GS      A+N
Sbjct: 174 FELMYKTYSQILQRMGLDFRAVEADSGAIGGSGSKEFMVLAKN 216


>gi|227513178|ref|ZP_03943227.1| prolyl-tRNA synthetase [Lactobacillus buchneri ATCC 11577]
 gi|227083559|gb|EEI18871.1| prolyl-tRNA synthetase [Lactobacillus buchneri ATCC 11577]
          Length = 569

 Score =  129 bits (325), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 45/220 (20%), Positives = 92/220 (41%), Gaps = 11/220 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +       + +E   H+ L R   +  I+    G+  +    +++   + + +R++
Sbjct: 4   SKILVPTLKETPKGAEALSHKMLVRAGYIKQISA---GMYAYLPLAYRVLTKIETIVRQE 60

Query: 287 IKDD-YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++     E+  P VL   LW++SG +++Y   +F  K   DT      F L P +     
Sbjct: 61  MEKTSAHEMLMPDVLPAELWKESGRYETYGPELFKFKNRHDT-----DFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    +KSY++LP+ L +  + YR+E     +GL+R R F   DA+ F   E   ++  
Sbjct: 116 ELIRDSIKSYKQLPLVLYQIQNKYRDEDRPR-YGLLRSREFIMKDAYSFAANEADLDDAY 174

Query: 406 -KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
             +     +I+   G +  ++           S      A
Sbjct: 175 CAMEKAYRTIFDRIGLKYRVIIGDGGAMGGSDSKEFSAMA 214



 Score = 80.6 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 34/165 (20%), Positives = 60/165 (36%), Gaps = 12/165 (7%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN--- 545
           R  + G I       S+     V   + +  PV++     G I R +  + E        
Sbjct: 404 RGIEIGHIFKLGTRYSKSLNANVLDENGRSIPVIMGSYGIG-ISRLLSAISEQNADENGL 462

Query: 546 -LPLWLSPIQAIVTTITSS---AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             P+ ++P    V  I       +  A +I   L  + + +  D R E    K  +  + 
Sbjct: 463 VWPVAVAPYTVHVIPINVKKEVQMNLANQIEEQLTENGIEVLVDDRRERPGVKFADSDLL 522

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA---IPILTK 643
            IP+ I  G K A E  + I+   +  T +  + +    + IL K
Sbjct: 523 GIPLRITVGKK-ADEGIVEIKIRKNGETVESKVEELSDTVKILLK 566


>gi|121612398|ref|YP_001000243.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176]
 gi|152016593|sp|A1VYQ2|SYP_CAMJJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|87250412|gb|EAQ73370.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176]
          Length = 569

 Score =  129 bits (325), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 43/229 (18%), Positives = 92/229 (40%), Gaps = 11/229 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            T+          +++    H  L R      + + GSG+  +   G ++   + + ++ 
Sbjct: 4   FTKFYAPSLKEAPKDASLPSHIFLTRAG---FVEQIGSGLYNFLPLGKRVLDKIKNIVKE 60

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +E+N   +    LWQ+SG ++ +   +   K      +    F L P +    
Sbjct: 61  EMDKAGAQEVNLSFITPASLWQESGRYNVFGKELLRFKD-----RKKNEFVLGPTHEEAM 115

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           +++  + + SY++LP+ L + G  +R+E      GL+R R F   D + F   E+     
Sbjct: 116 LSLVKNKITSYKQLPLHLYQIGLKFRDEARPRF-GLLRCREFLMKDGYSFHANEEDLGRE 174

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
            + ++     I +  G +   V+  +      GS      A+N    +L
Sbjct: 175 FELMYKTYSQILQRMGLDFRAVEADSGAIGGSGSKEFMVLAKNGEDDIL 223



 Score = 82.1 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 59/165 (35%), Gaps = 9/165 (5%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNLP 547
           +  + G I       S+         + K  P  +     G   R + + IE N      
Sbjct: 407 KGIEVGHIFKLGQKYSKAMNANFLDENGKSQPFYMGCYGIGVS-RLLAVAIEANHDEKGC 465

Query: 548 LW---LSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W   L+P    +         A+E+A ++   L +  L +  D RNE    K+ +  + 
Sbjct: 466 IWNKTLAPFVLEIIVSNLKDEKALEFANKLYEDLTNLGLEVLLDDRNERFGVKMNDFELM 525

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
             P  ++ G K      I + +      + +   + + IL K+ L
Sbjct: 526 GFPYALVIG-KGLENNEIELIQREDLVKELIKTDELMEILKKKVL 569


>gi|32473557|ref|NP_866551.1| prolyl-tRNA synthetase [Rhodopirellula baltica SH 1]
 gi|81658286|sp|Q7UGJ7|SYP_RHOBA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|32398237|emb|CAD78332.1| prolyl tRNA synthetase [Rhodopirellula baltica SH 1]
          Length = 506

 Score =  129 bits (325), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 70/444 (15%), Positives = 148/444 (33%), Gaps = 70/444 (15%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++   T      EE+    ++++ R  DL   +     ++     G+++++ +   +   
Sbjct: 7   SKAPRTAISPTREENYPEWYQQVIRAADLAENSPVRGCMVI-KPWGYQLWENVQRALDDM 65

Query: 287 IKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTI----------KDLRTF 334
            K   ++    P  +     + ++ H + +      V                 K     
Sbjct: 66  FKATGHQNAYFPLFIPMSFLEKEAEHVEGFAKECAVVTHHRLEPDPDGGLRPAGKLEEPL 125

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
            ++P +     A +   ++SYR+LP+ + ++ +V R E        +R   F   + H  
Sbjct: 126 IVRPTSETIIGATYAKWVQSYRDLPILINQWANVVRWEMR--TRMFLRTAEFLWQEGHTV 183

Query: 395 C-TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
             T E+   E  K+      +Y+DF    + +         VGS           K  L+
Sbjct: 184 HATSEEAVEETEKMV----EVYRDFAENWMAM------PVIVGS-----------KTPLE 222

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS 513
                             GA      E +++D   +  Q GT        S+  A  +  
Sbjct: 223 RF---------------PGAVETLSIEAMMQDR--KALQAGTSHFLGQNFSK--AQEIKF 263

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSS-----A 564
            SE           +G   R IG +I    ++    LP  L+P   ++  I         
Sbjct: 264 QSESGDIEFAWTTSWGVSTRLIGALIMTHSDDDGLVLPPRLAPTHVVIQPIYKDDSRAEV 323

Query: 565 VEYAQEIANLLKSHHL-----SIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSI 619
           +EY Q + + L +         +  D R+     K   H  + +PI +  G K+ +  ++
Sbjct: 324 MEYVQSLRDELAAQTYANAPVRVTIDDRDIRGGEKKWYHVKRGVPIRLEVGPKDIAAGTV 383

Query: 620 GIRRFGSTTTQKVSLLDAIPILTK 643
                    +  +   + +  + +
Sbjct: 384 FCGIRNQPKSVGIDRAELVATIGE 407


>gi|256824985|ref|YP_003148945.1| prolyl-tRNA synthetase [Kytococcus sedentarius DSM 20547]
 gi|256688378|gb|ACV06180.1| prolyl-tRNA synthetase, family II [Kytococcus sedentarius DSM
           20547]
          Length = 596

 Score =  129 bits (325), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 45/211 (21%), Positives = 79/211 (37%), Gaps = 11/211 (5%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-D 290
                   ++E   HR L R   +  +A    G+  W   G K+ + +   +R +++   
Sbjct: 11  RTLREDPTDAELPGHRLLVRAGYVRRVA---PGIYTWLPLGLKVMEKVKGIVREEMEAIG 67

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH 350
            +EI  P +L +  ++ S  W  Y  ++F +     T +      L P +          
Sbjct: 68  DQEIAFPSLLPREPYEASNRWTEYGDDLFRL-----TDRKGADMLLGPTHEEMFTLAVKD 122

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN- 409
              SY++LP+ L +    YR+E       L R R FT  DA+ F   E       + H  
Sbjct: 123 LYTSYKDLPLGLFQILPKYRDELRPRAGVL-RGREFTMKDAYSFDVDEAGLEAAYQRHRK 181

Query: 410 LIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
               ++   GFE + V   +       S+  
Sbjct: 182 AYTRVFDRLGFEYVAVHADSGAMGGSASEEF 212



 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/151 (19%), Positives = 61/151 (40%), Gaps = 13/151 (8%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN- 545
           R  + G I Q+            ++ + +    V +    +G  I R +G++ E      
Sbjct: 432 RGVEMGHIFQLGTKYAEALGLKVLDQNGKL---VTVQMGSYGIGITRAVGVVAETHHDEI 488

Query: 546 ---LPLWLSPIQAIVTTITSS--AVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHS 599
               P  LSP    V         +E A+E+   L+   L++  D R + +   K ++  
Sbjct: 489 GLVWPRELSPADVHVVATGKDAAVLEKAEELTAALEQQGLTVLLDDRPKVSPGVKFKDAE 548

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
           +  +P I++ G K  +E  + I+   + +++
Sbjct: 549 LIGVPTILVVG-KGLAEGEVEIKDRAAGSSR 578


>gi|326427807|gb|EGD73377.1| hypothetical protein PTSG_11497 [Salpingoeca sp. ATCC 50818]
          Length = 338

 Score =  129 bits (325), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 55/264 (20%), Positives = 113/264 (42%), Gaps = 22/264 (8%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEII---TPEDPRSLAVIRHS 76
              + +   IS     +  A  +NG + DL  P+ +   ++ +   T  D     +  HS
Sbjct: 58  TVPAQLMRGISNR--NQIAACRVNGHLWDLMRPLTDTCHLQFLFWDTDWDYGLKEMCWHS 115

Query: 77  CAHIMAEAVQSIWPE-VQVAIGPIIEDG--FYYDFDKEQPFS--SDELAQIEKKMQEIIA 131
            AH++  A++ ++ + + +  GP ++ G  F+Y+   +   +  +D LAQ+EK M E+  
Sbjct: 116 GAHVLGAALEEVYGDDILLCDGPPVKRGAGFFYEGHLKHGQTVNTDALAQVEKHMHELCR 175

Query: 132 RDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRST 191
                 +  ++ E+A ++F                 + ++++Y+   + DLC GPH+R+ 
Sbjct: 176 LQHDLQRIDVTPEQALDVFCDNPFKQHFIHRAQQQGETSISIYKLASFVDLCEGPHIRNL 235

Query: 192 G-QVKKFFKLMKVAGAYWRGDSNRPM----------LSRIYGTAWNTQQELTQYLYFLEE 240
                K   L   + A +       M          L+R YG  + ++Q    +   +EE
Sbjct: 236 RPFSSKTIALTSTSQAEFDWSGREEMKPDNWDTHTPLTRTYGICFPSKQMFRHWKRDVEE 295

Query: 241 SEKRDHRKLAREMDLFHIAEDGSG 264
            EK +H  + + + +F   +   G
Sbjct: 296 REKYNHSAVGKSLSIFMQHDTSPG 319


>gi|242309901|ref|ZP_04809056.1| prolyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489]
 gi|239523198|gb|EEQ63064.1| prolyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489]
          Length = 578

 Score =  129 bits (325), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 42/222 (18%), Positives = 86/222 (38%), Gaps = 12/222 (5%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDL----FHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +    +F+   ++     + +  +       I + GSG+  +   G ++   +   ++++
Sbjct: 1   MRFSNFFIPTLKETPKDVVLKSHEYLLRGGFIQQIGSGIYNFLPLGKRVLDKISKIVKQE 60

Query: 287 I-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+    V    LWQ SG ++ Y   +   K   +       F   P +     
Sbjct: 61  MDNAGANEVLLGCVTPASLWQASGRYERYGKELLRFKDRKEN-----EFVFGPTHEETIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +    +KSY++LP+ L +  + +R+E      GLMR R F   D + F +  E +  E 
Sbjct: 116 ELVKTYVKSYKQLPLHLYQIQTKFRDEIRPRF-GLMRGREFIMKDGYSFHSSYEDLKREF 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
            ++      I+   G +   V+  +      GS      AE+
Sbjct: 175 DEMERTYSVIFSKLGLDFRAVEADSGAIGGSGSKEFMVLAES 216



 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 25/156 (16%), Positives = 50/156 (32%), Gaps = 9/156 (5%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           +  + G I Q+         A +++ +  K  P ++     G       I+ +++     
Sbjct: 412 KGIEVGHIFQLGEKYSQAMGATFLDENG-KSKPFIMGCYGIGISRLLAAIIEQHYDEKGM 470

Query: 548 LWLSPIQAIVT------TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            W       +             VE A  I + L    +    D RNE    K+ +  + 
Sbjct: 471 KWTKATAPFLLDIVISNVKDCEQVELATRIYHALSEQKIECLLDDRNERYGAKMADFELI 530

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
            +P  +I G K   E  + +    +       + D 
Sbjct: 531 GMPYALIVG-KGIQEGKVELVCRANLEKTMFEVNDF 565


>gi|223995497|ref|XP_002287422.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220976538|gb|EED94865.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 517

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 68/437 (15%), Positives = 143/437 (32%), Gaps = 75/437 (17%)

Query: 233 QYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DY 291
            Y+    E+  + +  + R  DL   +     ++     G  I+  + + +  +IK+   
Sbjct: 13  DYITSRAENYSKWYNDIIRVCDLADNSPVRGCMVI-KPWGMSIWDQIRNDLDARIKEHGA 71

Query: 292 EEINTPQVLDQHLW-QQSGHWDSYRANMFAVKC--------------ADDTIKDLRTFAL 336
           E    P ++ +    +++ H D +      V                AD   +      +
Sbjct: 72  ENAYFPLLIPKSFLSKEAEHVDGFAKECAVVTHHRLTVDPSGEGGLIADPEAELEDPLII 131

Query: 337 KPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FC 395
           +P +      +F   + S+R+LP+++ ++ +V R E        +R   F   + H    
Sbjct: 132 RPTSETMIWNMFKKWIVSHRDLPLKMNQWANVMRWEMR--TRPFLRTSEFLWQEGHTAHA 189

Query: 396 TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTI 455
           T E    +   + +    + ++     ++    +  E+  G++  +              
Sbjct: 190 TSEGALEDSKLMLDQYAEMCQNLLAIPVIKGAKSPSERFAGAEETFTI----------EA 239

Query: 456 KNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS 515
              +   + +G     G  +G  F+   +DA G+       Q D                
Sbjct: 240 LMQNGWALQSGTSHFLGQSFGKAFDVTFQDAEGK-------QQD---------------- 276

Query: 516 EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTI--------TSSAVEY 567
                  +    +G   R IG +I     +  L L P  A V  +             + 
Sbjct: 277 -------VWGTSWGVSTRLIGALIMTHSDDAGLVLPPRVAPVQVVVVPIPPKKNDEEGKV 329

Query: 568 A-----QEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGI 621
           A      ++   LKS  L ++ D R+      K  E   K +P+ I  G ++        
Sbjct: 330 ALNNALDKMVANLKSAGLKVKVDDRDYVRNGAKYFEWERKGVPLRIELGPRDVKGGVCVF 389

Query: 622 RRF-GSTTTQKVSLLDA 637
           +   G    + VSL + 
Sbjct: 390 KYRVGKEEKETVSLDEV 406


>gi|15220974|ref|NP_173251.1| tRNA synthetase-related / tRNA ligase-related [Arabidopsis
           thaliana]
 gi|332191556|gb|AEE29677.1| class II aaRS and biotin synthetase domain-containing protein
           [Arabidopsis thaliana]
          Length = 165

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 41/144 (28%), Positives = 70/144 (48%), Gaps = 1/144 (0%)

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK-CHPVMIHRAVFGSIERFIGIMIENF 542
           K+    D    +  VDF+L  RF   Y   +       V+IHRAV  S+ER   I++E +
Sbjct: 3   KNHPDEDETNLSSAVDFHLRDRFKLEYSAENETMIERSVLIHRAVLSSVERLFAILLEQY 62

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
           KG  P WLSP QAIV +++     YA ++ + +      ++ D  +  ++ K++E  +  
Sbjct: 63  KGKFPFWLSPRQAIVCSVSEDYRSYADKVRDQIHEAGYYVDVDTTDRNVSDKVQEAQVAH 122

Query: 603 IPIIIICGDKEASERSIGIRRFGS 626
              I++ GD+EA    + +     
Sbjct: 123 YNYILVVGDEEARTGQVTVWLRDE 146


>gi|57167588|ref|ZP_00366728.1| prolyl-tRNA synthetase [Campylobacter coli RM2228]
 gi|57020710|gb|EAL57374.1| prolyl-tRNA synthetase [Campylobacter coli RM2228]
          Length = 569

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 48/263 (18%), Positives = 96/263 (36%), Gaps = 18/263 (6%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++          +++    H  L R      + + GSG+  +   G ++   + + ++ 
Sbjct: 4   FSKLYAPSLKEAPKDATLPSHIFLTRAG---FVEQIGSGLYNFLPLGKRVLDKIRTIVKE 60

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +E+N   V    LWQ+SG ++ +   +   K   +       F L P +    
Sbjct: 61  EMDKAGAQEVNLSFVTPATLWQESGRYNVFGKELLRFKDRKEN-----DFVLGPTHEEAM 115

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           +++  + + SY++LP+ L + G  +R+E      GL+R R F   D + F   E+     
Sbjct: 116 LSLVKNKITSYKQLPLHLYQIGLKFRDEARPRF-GLLRCREFLMKDGYSFHANEEDLTRE 174

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              ++     I +  G E   V   +      GS      A+N    +L          +
Sbjct: 175 FDLMYKTYSQILQRMGLEFRAVDADSGAIGGSGSKEFMVLAKNGEDDILICENCDYAANV 234

Query: 464 NTGV-------LLGEGAFYGPKF 479
              +            A Y  KF
Sbjct: 235 EAAIRANKTCEEERPEANYASKF 257



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 58/164 (35%), Gaps = 9/164 (5%)

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGN 545
           + +  + G I       S+         + K  P  +     G   R + + IE N    
Sbjct: 405 LSKGIEVGHIFKLGQKYSKAMNANFLDENGKSKPFYMGCYGIGVS-RLLAVAIEANHDEK 463

Query: 546 LPLW---LSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
             +W   L+P    +         ++E+A ++   L +  + +  D RNE    K+ +  
Sbjct: 464 GCIWNKTLAPFTLEIIISNIKDEKSLEFATKLYEDLSNAGIEVLLDDRNERFGVKMNDFE 523

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +   P  ++ G K   +  +      +   + +S  +A   + K
Sbjct: 524 LMGFPYALVVG-KGLEKDELEFIDRKTLEKKIISSKEAFDFIKK 566


>gi|227503402|ref|ZP_03933451.1| prolyl-tRNA synthetase [Corynebacterium accolens ATCC 49725]
 gi|227075905|gb|EEI13868.1| prolyl-tRNA synthetase [Corynebacterium accolens ATCC 49725]
          Length = 594

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 36/208 (17%), Positives = 81/208 (38%), Gaps = 11/208 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +  +A    G+  W   G +  + +   +R+++     +E+  P 
Sbjct: 24  DAEVPSHKLLVRAGYVRRVA---PGIYTWLPLGLRALRKIEDVVRQEMDAIGGQEMLFPA 80

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++++  W  Y  N+F ++   +         L P +             SY++ 
Sbjct: 81  LLPREPYEKTNRWVEYGPNLFRLQDRKNA-----DLLLGPTHEEMFANAVKDMYSSYKDF 135

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKD 417
           PV L +  + YR+E       L R R F   D++ F   ++  +     H     +++  
Sbjct: 136 PVTLYQIQTKYRDEERPRAGVL-RGREFVMKDSYSFDMNDEGLDSSYARHRKAYQNVFDR 194

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAE 445
              +  + K ++       S+     +E
Sbjct: 195 LEIDYAICKATSGAMGGSASEEFLALSE 222



 Score = 87.5 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 73/197 (37%), Gaps = 12/197 (6%)

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNS 513
                   ++  V   E     P  +     A+ R  + G I Q+       F+   ++ 
Sbjct: 398 CVAGRDFHVDEFVEAAEVKEGDPAPDNQGTLALQRGIELGHIFQLGRKYTEAFDVQILDE 457

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIMIE----NFKGNLPLWLSPIQAIVTTITSSA--VEY 567
           + ++  P M    +   I R + ++ E    +   N P+ ++P Q  V      A  +E 
Sbjct: 458 NGKRAIPTMGSYGI--GISRMLAVLAEQRHDDKGLNWPVAVAPYQVHVAVANKDAAAMEA 515

Query: 568 AQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS 626
             ++   L    L +  D R + +   K ++  +  +P + I G +   +  I +R  G 
Sbjct: 516 GDKLVEELSQAGLEVLFDDRPKVSPGVKFKDAELLGMPFVAIVG-RAFKDGIIELRIRGQ 574

Query: 627 TTTQKVSLLDAIPILTK 643
            T + V   + +  L +
Sbjct: 575 ETLE-VPADEIVDKLLE 590


>gi|306836356|ref|ZP_07469334.1| proline--tRNA ligase [Corynebacterium accolens ATCC 49726]
 gi|304567716|gb|EFM43303.1| proline--tRNA ligase [Corynebacterium accolens ATCC 49726]
          Length = 594

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 36/208 (17%), Positives = 81/208 (38%), Gaps = 11/208 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +  +A    G+  W   G +  + +   +R+++     +E+  P 
Sbjct: 24  DAEVPSHKLLVRAGYVRRVA---PGIYTWLPLGLRTLRKIEDVVRQEMDAIGGQEMLFPA 80

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++++  W  Y  N+F ++   +         L P +             SY++ 
Sbjct: 81  LLPREPYEKTNRWVEYGPNLFRLQDRKNA-----DLLLGPTHEEMFANAVKDMYSSYKDF 135

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKD 417
           PV L +  + YR+E       L R R F   D++ F   ++  +     H     +++  
Sbjct: 136 PVTLYQIQTKYRDEERPRAGVL-RGREFVMKDSYSFDMNDEGLDSSYARHRKAYQNVFDR 194

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAE 445
              +  + K ++       S+     +E
Sbjct: 195 LEIDYAICKATSGAMGGSASEEFLALSE 222



 Score = 87.5 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 73/197 (37%), Gaps = 12/197 (6%)

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNS 513
                   ++  V   E     P  +     A+ R  + G I Q+       F+   ++ 
Sbjct: 398 CVAGRDFHVDEFVEAAEVKEGDPAPDNQGTLALQRGIELGHIFQLGRKYTEAFDVQILDE 457

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIMIE----NFKGNLPLWLSPIQAIVTTITSSA--VEY 567
           + ++  P M    +   I R + ++ E    +   N P+ ++P Q  V      A  +E 
Sbjct: 458 NGKRAIPTMGSYGI--GISRMLAVLAEQRHDDKGLNWPVAVAPYQVHVAVANKDAAAMEA 515

Query: 568 AQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS 626
             ++   L    L +  D R + +   K ++  +  +P + I G +   +  I +R  G 
Sbjct: 516 GDKLVEELSQAGLEVLFDDRPKVSPGVKFKDAELLGMPFVAIVG-RAFKDGIIELRIRGQ 574

Query: 627 TTTQKVSLLDAIPILTK 643
            T + V   + +  L +
Sbjct: 575 ETLE-VPADEIVDKLLE 590


>gi|71893734|ref|YP_279180.1| prolyl-tRNA synthetase [Mycoplasma hyopneumoniae J]
 gi|114152216|sp|Q4A9V2|SYP_MYCHJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|71851861|gb|AAZ44469.1| prolyl-tRNA synthetase [Mycoplasma hyopneumoniae J]
          Length = 479

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 64/413 (15%), Positives = 137/413 (33%), Gaps = 57/413 (13%)

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK 288
            +  + +     +  + +  +  + DL +       + F    G+KI++ ++  +     
Sbjct: 1   MKKPEKITSRTANFAKWYVDVITQADLMNYGPIKGTIYF-KPLGYKIWENIVKIVNAYFV 59

Query: 289 DDYEE-INTPQVLDQHL-WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA 346
               E +  P ++ Q    ++  H + +   +  +            + ++P +      
Sbjct: 60  KQKIENVYFPLLIPQDFIEKEKKHIEGFAPELLTITKVGGKNLVENIY-IRPTSELLFAD 118

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE-QMFNECL 405
            F   +     LP++L ++  V R E   + +  +R   F   + H     + +      
Sbjct: 119 YFKAEIAKNNILPIKLNQWSQVLRWEK--TTNPFLRNTEFLWQEGHTIHASKVEADQFAK 176

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
           KI        +++    ++    T  EK  G                             
Sbjct: 177 KIARFYKYFLENYLAIPVISGQKTEREKFAG----------------------------- 207

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIH 524
                  A      E ++++   R  Q  T   +  N    F  FY N  ++   P    
Sbjct: 208 -------AVNTYTVEAMMQNF--RALQSATAHFLGQNFAKNFEIFYKNKENKSQIPF--- 255

Query: 525 RAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVT----TITSSAVEYAQEIANLLK 576
           +  +G   R IG ++    ++     P  ++PIQ  +             +A++IA +LK
Sbjct: 256 QTSWGLSTRLIGAIVMVHSDDNGLIFPPKIAPIQVDILEFFSKKNQEVKIFAKKIAKILK 315

Query: 577 SHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           +  +S + D  ++ I YKI    +   PI I  G  E     I + R  +   
Sbjct: 316 NAKISYKIDDTDQQIGYKINNSEVHGAPIRIEIGPNEVKNNQICLVRRDNHQK 368


>gi|332024431|gb|EGI64629.1| Putative prolyl-tRNA synthetase, mitochondrial [Acromyrmex
           echinatior]
          Length = 437

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 62/388 (15%), Positives = 139/388 (35%), Gaps = 32/388 (8%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
            +   + H+ +     +  ++    G+      G +I   LI  + +++ +   ++I  P
Sbjct: 29  TDITSKSHKLMINYGIIKPLSI---GMYALLPLGMRILNKLIDIVDKEMMNIGAQKILLP 85

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG---LKS 354
            +    LW+++  +DS +  +F +     T +  + + L P +      + +     +  
Sbjct: 86  ALTPAALWKKTDRYDSNKTELFTL-----TDRHKKEYILSPTHEEAICDLISLAGPTVPI 140

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIIS 413
            + LP++L +  S +R+E    L G +R R F   D + F +  +   +    +     +
Sbjct: 141 SKLLPLKLYQISSKWRDEMKPRL-GFLRSREFIMKDLYTFDSSLDNARHTYDLVCESYNN 199

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
           I++  G +             + S      ++     +L     S    IN  +      
Sbjct: 200 IFRQIGIKYTKSIGDVGTIGGLMSHEYHYVSDIGEDTILQC--PSCHFSINQSISKTTSC 257

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
               K E     A     + G   +     SR           K  P+++     G + R
Sbjct: 258 PEC-KNELHSYTAA----EVGHTFLLDTKYSRPLEVMFFMEQNKPTPMVMGCFGLG-LSR 311

Query: 534 FIGIMIE----NFKGNLPLWLSPIQAIVTTITSSAVE-----YAQEIANLLKSHHLSIET 584
            I +++E    N +   P+ L+P    +    + + E     Y +++  +    ++    
Sbjct: 312 IITLVVEILSINDEMRWPVKLAPYTVCIIPPKAGSKEESTSAYIEQLFEIFYKRNIDTIL 371

Query: 585 DFRNE-TINYKIREHSIKKIPIIIICGD 611
           D R   TI  ++    +   P II+ G 
Sbjct: 372 DDRTHYTIGKRLVFARLLGYPYIIVIGK 399


>gi|225021160|ref|ZP_03710352.1| hypothetical protein CORMATOL_01172 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224946067|gb|EEG27276.1| hypothetical protein CORMATOL_01172 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 584

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 39/203 (19%), Positives = 77/203 (37%), Gaps = 11/203 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +        GV  W   G +  + +   +R ++     +E+  P 
Sbjct: 19  DAEVPSHKLLVRAGYIR---RAAPGVYTWLPLGLRTLRKIEKVVREEMDHIGAQELLFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++Q+  W  Y  N+F +K      +      L P +             SY++ 
Sbjct: 76  LLSREPYEQTRRWTEYGDNLFRLKD-----RKGNDMLLGPTHEEMFARQVKDMFTSYKDF 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKD 417
           PV L +  + YR+E      G++R R F   D++ F   +    +    H     +I+  
Sbjct: 131 PVTLYQIQTKYRDEERPR-AGILRGREFVMKDSYSFDMTDAGLEQSYLAHRAAYQAIFDR 189

Query: 418 FGFEKIMVKLSTRPEKRVGSDAL 440
              E  + K ++       S+  
Sbjct: 190 LNLEYAICKATSGAMGGSASEEF 212



 Score = 85.2 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 37/189 (19%), Positives = 75/189 (39%), Gaps = 12/189 (6%)

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPV 521
           I+  V + E     P  +      + R  + G I Q+       F+   ++ H ++  P 
Sbjct: 396 IDEYVEVAEIREGDPAPDGQGVLTLERGIEIGHIFQLGRKYTEVFDVQILDEHGKRAIPT 455

Query: 522 MIHRAVFGSIERFIGIMIE----NFKGNLPLWLSPIQAIVTTITSSAVEYA--QEIANLL 575
           M    +   + R +G++ E    +   N P+ ++P Q  V          A   +I   L
Sbjct: 456 MGSYGI--GVSRLVGVIAEQHHDDNGLNWPVEVAPYQVHVVVANKDKAALAAGDDIVVQL 513

Query: 576 KSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
            +  + +  D R + +   K ++  +  +P I++ G +  S   + +R  G  T + V  
Sbjct: 514 DAAGVEVLFDDRPKVSPGVKFKDSELLGMPYIVVLG-RSFSNGIVELRIRGGETLE-VPA 571

Query: 635 LDAIPILTK 643
            D +  +TK
Sbjct: 572 TDIVDTVTK 580


>gi|330464914|ref|YP_004402657.1| prolyl-tRNA synthetase [Verrucosispora maris AB-18-032]
 gi|328807885|gb|AEB42057.1| prolyl-tRNA synthetase [Verrucosispora maris AB-18-032]
          Length = 583

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 65/358 (18%), Positives = 116/358 (32%), Gaps = 21/358 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   HR L R   L        G   W   G  +   +   +R ++     +E++ P 
Sbjct: 19  DAEVPSHRLLLRAGYLR---RAAPGGYTWLPLGKLVLDRVSEIVRAEMAAIGGQEVHFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L    ++ SG W  Y  ++F +       +      L P +      +      SYR+L
Sbjct: 76  LLPAEPYRTSGRWTEYGDDIFTL-----ADRRGAEHLLAPTHEEMAALLVKELFTSYRDL 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKD 417
           PV L +  + +R+E      GL+R R F   DA+ F   ++        H      I+  
Sbjct: 131 PVTLFQIQTKFRDEARPR-AGLLRGREFLMKDAYSFDLDDEGLRAAYGRHRAAYQKIFDR 189

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDA---ENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            G +  +V   +       S+     A   E+   G  D    ++ + + T V       
Sbjct: 190 LGLDYTVVHAVSGAMGGSASEEFLATAAVGEDTYVGCTDCDHAANTEAVTTPVPPAGDPQ 249

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
             P  E               +  +  L  R +     + + K   + + R      E  
Sbjct: 250 RPPAVEVHDTPETPTIASLVALANERALGGRTDWT--AADTLKNVVLTVRRPGVEETELL 307

Query: 535 IGIM---IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIA--NLLKSHHLSIETDFR 587
           +  +    E     L   LSP    +     +  E  +      +L    L    D R
Sbjct: 308 VVGVPGDREVDLKRLAAALSPATVDIFDGWDAHPELVRGYIGPQVLDKLGLRYLVDPR 365



 Score = 77.9 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 30/165 (18%), Positives = 64/165 (38%), Gaps = 12/165 (7%)

Query: 486 AIGRDWQCGTIQVDFNLPSRF-NAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFK 543
            + R  + G I   F L  R+ +AF V+    +  PV +    +G  + R +  + E   
Sbjct: 418 TMRRGIEIGHI---FQLGRRYTDAFAVDVLGPQGKPVRLTMGCYGIGVSRAVAAIAEQHH 474

Query: 544 GN----LPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFR-NETINYKIRE 597
                  P  ++P    +        ++ A ++   L +  L +  D R   +   K  +
Sbjct: 475 DERGLVWPTSVAPCDVHLVAAGKGPQLDAAVDLGAQLAAAGLRVLVDDRVGVSAGVKFTD 534

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             +  IP  ++ G +  ++  + +R   +    ++SL D +  L 
Sbjct: 535 AELIGIPRTVVVGRR-LADGYVELRDRATGERVELSLPDLLAQLA 578


>gi|255654577|ref|ZP_05399986.1| putative phosphoribulokinase/uridine kinase [Clostridium difficile
           QCD-23m63]
 gi|296449351|ref|ZP_06891133.1| phosphoribulokinase [Clostridium difficile NAP08]
 gi|296880715|ref|ZP_06904667.1| phosphoribulokinase [Clostridium difficile NAP07]
 gi|296261821|gb|EFH08634.1| phosphoribulokinase [Clostridium difficile NAP08]
 gi|296428288|gb|EFH14183.1| phosphoribulokinase [Clostridium difficile NAP07]
          Length = 555

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 44/264 (16%), Positives = 94/264 (35%), Gaps = 12/264 (4%)

Query: 6   KLTFP-DGSIKNFP-----VHATGSDVAESISRSLAKKAVAVAINGKVCDLS-DPVREGS 58
           K+    +G  K +            D+A+              ++ K+ +L+    ++  
Sbjct: 3   KINLKIEGKDKEYSLEENSHGIRLGDIAKEFCDEHKGYITLAVVDNKLKELNCRVKKDCE 62

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           I  +   +     V     + I   A + I+ + +V I   + DG Y +   ++     +
Sbjct: 63  INFLDTTNEDGERVYFRVMSFIFVMACREIFWDSRVTIEHSLSDGLYCEVHIDRKLKEVD 122

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           +  I+ KM+EI+  D    K  ++  +A  +FE+ +   K E+L      ++  +Y+   
Sbjct: 123 VENIKNKMKEIVNNDYVIEKIEVTRNEAISIFENNEMYEKAELL-KYKEYDSAKVYKCRN 181

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNT----QQELTQY 234
           + D   G  + STG +K F   +   G    G S       +             E  ++
Sbjct: 182 YIDHFYGYMLPSTGYIKSFDIKLYNGGVIILGPSEEDKTLPMKFVPQPKLSSVYYEAEEW 241

Query: 235 LYFLEESEKRDHRKLAREMDLFHI 258
              +   +     K+    +   I
Sbjct: 242 SRLMGIDKVVSLNKIIENNEYGDI 265


>gi|253828011|ref|ZP_04870896.1| prolyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|253511417|gb|EES90076.1| prolyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
          Length = 578

 Score =  129 bits (324), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 50/267 (18%), Positives = 96/267 (35%), Gaps = 22/267 (8%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  +  +    ++   + H  L R      I + GSG+  +   G K+   +   ++ 
Sbjct: 3   FSKFFIPTFKEVPKDVILKSHEYLLRGG---FIQQIGSGIYNFLPLGKKVLDKISRIVKN 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           K+ +    E+    V    LWQ SG +D Y   +   K   +       F   P +    
Sbjct: 60  KMDEAGANEVLLGCVTPASLWQASGRYDRYGKELLRFKDRKEN-----EFVFGPTHEETI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
             +    +KSY++LP+   +  + +R+E      GLMR R F   D + F +  E +  E
Sbjct: 115 TELAKTYIKSYKQLPLHFYQIQTKFRDEIRPRF-GLMRGREFIMKDGYSFHSNYEDLKRE 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN-----------IMKGVL 452
              +     +I+ + G +   V+  +      GS      AE+                L
Sbjct: 174 FDVMEKTYSAIFLELGLDFRAVEADSGAIGGSGSKEFMVLAESGEDTICVCDSCSYAANL 233

Query: 453 DTIKNSSQDRINTGVLLGEGAFYGPKF 479
           +      +  + T        F+ P+ 
Sbjct: 234 EAANRLPKMPLTTPPEANFAKFHTPQI 260



 Score = 81.4 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 57/162 (35%), Gaps = 9/162 (5%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           +  + G I Q+         A +++    K  P ++     G       I+ +N      
Sbjct: 412 KGIEVGHIFQLGEKYSQAMEATFLDEEG-KAKPFVMGCYGIGISRLLAAIIEQNHDEKGM 470

Query: 548 LWLSPIQAIVTTI------TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            W +     +  I        +  E A++I + L ++ +    D R E    K+ +  + 
Sbjct: 471 KWTATTAPFLLDIVVSNIKDENQSELAEKIYHALSANGIECLLDDRKERYGAKMADFELI 530

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            IP  +I G K   E  I +    +     + + D   ++ K
Sbjct: 531 GIPYALIVG-KGVEEGKIELVCRKNLEKINLEIADFESLIEK 571


>gi|313619139|gb|EFR90927.1| prolyl-tRNA synthetase [Listeria innocua FSL S4-378]
          Length = 409

 Score =  129 bits (324), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 43/184 (23%), Positives = 80/184 (43%), Gaps = 11/184 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E + H+ L R   +  +A   SG+  +        + + + +R +++     E+  P 
Sbjct: 17  DAEVKSHQLLLRAGFIRQVA---SGIYSYLPLAILTLRKIEAIVREELEAIGAAEMLMPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW +SG W  Y   +  +K      +  R F L P +     ++    +KSY+ L
Sbjct: 74  LQPAELWHESGRWADYGPELMRLKD-----RAARDFVLGPTHEELITSLLRDEIKSYKRL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKD 417
           P+ L +  + +R+E      GL+R R F   DA+ F  T E +      +H    +I+  
Sbjct: 129 PITLYQIQTKFRDEKRPRF-GLLRGREFIMKDAYSFHATSESLDETFELMHQAYSNIFSR 187

Query: 418 FGFE 421
            G E
Sbjct: 188 CGLE 191


>gi|313204643|ref|YP_004043300.1| ATPase AAA [Paludibacter propionicigenes WB4]
 gi|312443959|gb|ADQ80315.1| AAA ATPase [Paludibacter propionicigenes WB4]
          Length = 556

 Score =  129 bits (324), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 45/265 (16%), Positives = 100/265 (37%), Gaps = 7/265 (2%)

Query: 1   MPSDIKLTFPD-GSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGS 58
           M   + +   +  S  N+P+  +  ++ + +   L    +A  +N KV DL+  V +   
Sbjct: 1   MDKSVTIYCKNTQSYHNYPLGTSLIEIYQDLKIELKYPVMAARVNYKVEDLNFLVYKPKD 60

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSD 117
           IE I    P  + V   +   ++++A+  ++P V + I   I  G+Y   +   +P +  
Sbjct: 61  IEFIDLSTPSGMRVYVRTLCMVLSKAISELYPHVTLQIEHPISKGYYCKLENLNEPITPQ 120

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
            +A+I++++ E IA+    + +    ++ +ELF +K        L           +R  
Sbjct: 121 IIAKIKERVNETIAQGKRIICEEKQTKEVKELFVNKNLQSDKTALFETLGNPYFRFFRID 180

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQ----ELTQ 233
           ++ D   G  + ST  +  +  +    G           +                E   
Sbjct: 181 DYIDYYNGVLLPSTDYLGIYDLIRYYDGLLLCIPCRENPVELEEMVLMPKMYDIYKEYVG 240

Query: 234 YLYFLEESEKRDHRKLAREMDLFHI 258
           +   ++ +   D     R    F++
Sbjct: 241 WNKIMKINNVGDFNIACRNNQSFNM 265


>gi|313891975|ref|ZP_07825576.1| proline--tRNA ligase [Dialister microaerophilus UPII 345-E]
 gi|313119618|gb|EFR42809.1| proline--tRNA ligase [Dialister microaerophilus UPII 345-E]
          Length = 574

 Score =  129 bits (324), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 46/244 (18%), Positives = 92/244 (37%), Gaps = 11/244 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++           E+    H+ + +   +  I+   SG   +    W+  + + + +  
Sbjct: 3   ASKLYAPTLREIPSEAVVISHKYMLKAGMIRKIS---SGFYSYLPLAWRSIKKIENIIHE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++   + +EI         +WQQ+G WD Y   MF +K      +  R + L P +    
Sbjct: 60  EMAKIESQEILMSIAQPAEIWQQTGRWDVYGEEMFRLKD-----RHERDYCLAPTHEELV 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             + +    SY++LPV L +  + YR+E      GLMR R F   DA+ F   E+  ++ 
Sbjct: 115 TTLVHMDTFSYKQLPVSLYQIQNKYRDEKRPRF-GLMRSREFIMKDAYTFDVDEEGLDKQ 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +++   +I+   G     V   +       S      AE     ++  +       +
Sbjct: 174 YHDMYDAYTNIFTKCGLNFRTVIADSGAIGGSSSHEFEVLAEAGEADIVYEVDGEFAANV 233

Query: 464 NTGV 467
              +
Sbjct: 234 EAVI 237



 Score = 75.6 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 69/182 (37%), Gaps = 14/182 (7%)

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           G + E+     +G+ ++ GT           N  Y++ +  K  P+++     G      
Sbjct: 397 GKEIEFKKGIEVGQVFKLGT-----KYSESLNCTYLDKNG-KSKPMVMGCYGIGVTRTMA 450

Query: 536 GIMIENFKGNLPLW---LSPIQAIVTTITSSAVEY---AQEIANLLKSHHLSIETDFRNE 589
             + +N   +  +W   ++P + ++    +   E    A+E+   +   +  I  D RNE
Sbjct: 451 ASIEQNHDKDGIIWAVSIAPYEVVIIPANNKNSEVMKVAEELYRNMSKENNEIVFDDRNE 510

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPD 649
               K ++  +   PI +  G K      + I+   +    ++   D    +  ES+  D
Sbjct: 511 RAGIKFKDADLIGYPIRVTIGKKWEENGKVEIKIRRTGEVIEIDYKDCKAKV--ESILDD 568

Query: 650 CQ 651
            +
Sbjct: 569 LR 570


>gi|224419073|ref|ZP_03657079.1| prolyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|313142583|ref|ZP_07804776.1| prolyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|313131614|gb|EFR49231.1| prolyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
          Length = 573

 Score =  129 bits (324), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 50/267 (18%), Positives = 96/267 (35%), Gaps = 22/267 (8%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  +  +    ++   + H  L R      I + GSG+  +   G K+   +   ++ 
Sbjct: 3   FSKFFIPTFKEVPKDVILKSHEYLLRGG---FIQQIGSGIYNFLPLGKKVLDKISRIVKN 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           K+ +    E+    V    LWQ SG +D Y   +   K   +       F   P +    
Sbjct: 60  KMDEAGANEVLLGCVTPASLWQASGRYDRYGKELLRFKDRKEN-----EFVFGPTHEETI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
             +    +KSY++LP+   +  + +R+E      GLMR R F   D + F +  E +  E
Sbjct: 115 TELAKTYIKSYKQLPLHFYQIQTKFRDEIRPRF-GLMRGREFIMKDGYSFHSNYEDLKRE 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN-----------IMKGVL 452
              +     +I+ + G +   V+  +      GS      AE+                L
Sbjct: 174 FDVMEKTYSAIFLELGLDFRAVEADSGAIGGSGSKEFMVLAESGEDTICVCDSCSYAANL 233

Query: 453 DTIKNSSQDRINTGVLLGEGAFYGPKF 479
           +      +  + T        F+ P+ 
Sbjct: 234 EAANRLPKMPLTTPPEANFAKFHTPQI 260



 Score = 81.4 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 57/162 (35%), Gaps = 9/162 (5%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           +  + G I Q+         A +++    K  P ++     G       I+ +N      
Sbjct: 412 KGIEVGHIFQLGEKYSQAMEATFLDEEG-KAKPFVMGCYGIGISRLLAAIIEQNHDEKGM 470

Query: 548 LWLSPIQAIVTTI------TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            W +     +  I        +  E A++I + L ++ +    D R E    K+ +  + 
Sbjct: 471 KWTATTAPFLLDIVVSNIKDENQSELAEKIYHALSANGIECLLDDRKERYGAKMADFELI 530

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            IP  +I G K   E  I +    +     + + D   ++ K
Sbjct: 531 GIPYALIVG-KGVEEGKIELVCRKNLEKINLEIADFESLIEK 571


>gi|324998197|ref|ZP_08119309.1| prolyl-tRNA synthetase [Pseudonocardia sp. P1]
          Length = 577

 Score =  129 bits (323), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 56/362 (15%), Positives = 123/362 (33%), Gaps = 31/362 (8%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +  +A    GV  W   G K+ + + + +R ++     +EI  P 
Sbjct: 15  DAEVPSHKLLVRAGYVRRVA---PGVYSWLPLGLKVLRRIENVVREEMDAMGGQEIQFPA 71

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++ +  W  Y   +F ++      +    + L P +             SY++ 
Sbjct: 72  LLPREPYEATNRWTEYGPALFRIQD-----RKGGDYLLGPTHEELFTLAVKGEYSSYKDY 126

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKD 417
           PV L +  + YR+E      G++R R F   D++ F   ++  +E    H    I I+  
Sbjct: 127 PVVLYQIQTKYRDEERPR-AGILRGREFLMKDSYSFDLSDEGLSESYGKHRDTYIRIFDR 185

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
              + ++V  ++       S+    ++E         ++       N   +        P
Sbjct: 186 LALKYVIVAATSGAMGGSASEEFLAESETGEDT---FVRGPGGYAANVEAVTTPAPPAIP 242

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
             + +    +       TI+      +        +     + ++  R         +G+
Sbjct: 243 -LDGLPAAQVHHTPDTPTIETLVTYLNEHTDRTFTAADTLKNVLVKTRQPGAERWELVGV 301

Query: 538 MI----ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIA--------NLLKSHHLSIETD 585
            +    E     L   L P Q  +        ++A+             L ++ +    D
Sbjct: 302 GVPGDREVDMKRLEAALEPAQVELL----EEADFARNAFLVKGYIGPAALAANGVRYLVD 357

Query: 586 FR 587
            R
Sbjct: 358 PR 359



 Score = 75.6 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 65/162 (40%), Gaps = 12/162 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN- 545
           R  + G I Q+       F+   +   S+   PV I    +G  + R +  + E    + 
Sbjct: 414 RGIEIGHIFQLGRKYADAFSLDALGPDSK---PVRITMGSYGIGVSRLVAAIAEQCHDDS 470

Query: 546 ---LPLWLSP--IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
               P  ++P  +  +V   ++  +E  + +A  L++  LS+  D R  +   K  +  +
Sbjct: 471 GLVWPRSVAPFDVHVVVAGKSAELLEGGEVLAAELEAEGLSVILDDRKASPGVKFADAEL 530

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             +P I++ G +  ++  I ++   +    ++    A   + 
Sbjct: 531 VGVPTIVVVG-RGLADGKIELKDRATGERTEIPRDGAAAHVA 571


>gi|116491012|ref|YP_810556.1| prolyl-tRNA synthetase [Oenococcus oeni PSU-1]
 gi|122276806|sp|Q04F81|SYP_OENOB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|116091737|gb|ABJ56891.1| Prolyl-tRNA synthetase [Oenococcus oeni PSU-1]
          Length = 570

 Score =  129 bits (323), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 47/255 (18%), Positives = 101/255 (39%), Gaps = 16/255 (6%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        E++ + H  + R   +  +A    G+  +     +I   + S +R +
Sbjct: 4   SKIFIPTEKEVPAEAQVKSHIFMLRAGFIRQVA---GGIYAYLPLANRIINKIESIIREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +   D  E+  P+++   LW++SG + +Y   M+ +K   D     R F + P +     
Sbjct: 61  MNRIDANEMLMPEMIPAELWKESGRFYTYGPQMYQLKDRHD-----REFIMAPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            + +  +KSY++LP+ L +    +R+E     +GL+R R F   DA+ F + ++  ++  
Sbjct: 116 KIISDEIKSYKKLPLILYQIQQKFRDELRPK-NGLLRGREFIMKDAYSFSSDQKGLDDAY 174

Query: 406 KIHNL-IISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            +       I+   G +   +   +       S      A       +    NS +   N
Sbjct: 175 DLIESAYKRIFDRVGLDYREIIADSGSMGGKDSAEF--QAIAATGEDIIAYSNSGKYAAN 232

Query: 465 TGVLLGEGAFYGPKF 479
             +      F+  K 
Sbjct: 233 IEMAEE---FFEKKI 244



 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/161 (16%), Positives = 57/161 (35%), Gaps = 7/161 (4%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPL 548
           +  + G I       +      + +   K   +++     G       I  ++      +
Sbjct: 405 KGIEIGHIFKLGTFYTSKMGGQIQNEKGKLSDIIMGCYGIGISRLLSAIAEQSNDPKGFI 464

Query: 549 WL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
           W    +P    + T+     S V   ++I   L+     +  D R E    K  +  +  
Sbjct: 465 WPKAVAPFNVHLITMNTKNESQVNLTKQIDKNLQEAGFEVLVDDRKERPGVKFADSDLIG 524

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           IPI ++ G + A ++ + ++  G  +T  VS  + I  L  
Sbjct: 525 IPIRVVVGRQ-ADQQIVEVKARGQESTNDVSTDNLIAFLKD 564


>gi|325859754|ref|ZP_08172884.1| phosphoribulokinase/uridine kinase family protein [Prevotella
           denticola CRIS 18C-A]
 gi|325482680|gb|EGC85683.1| phosphoribulokinase/uridine kinase family protein [Prevotella
           denticola CRIS 18C-A]
          Length = 555

 Score =  129 bits (323), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 46/241 (19%), Positives = 93/241 (38%), Gaps = 3/241 (1%)

Query: 1   MPSDIKLTFPDGSI-KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-S 58
           M   +++   +       P+ +T SD+ +  +  +    V+  +N KV  L   V     
Sbjct: 3   MKQVLQIRCKNNKKSLKVPIGSTLSDIYKENNLQMTFGPVSAKVNNKVEGLHYRVYHNKD 62

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           +E +    P  +     S   ++ +AV  ++P   V I   + +G+Y +       + D+
Sbjct: 63  VEYLDLHAPSGIRTYTRSLFLVLCKAVHDLYPGSSVVIDIPVSNGYYCNLKLGHAVTPDD 122

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           + +I  +MQEII    P  +   + E+A E+F    +  K ++L S         Y   +
Sbjct: 123 VRRIRTRMQEIIDARLPIQRFETTTEEAVEMFNCLGDGQKAKLLRS-SGTLYSVYYVLDD 181

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D   G  + +T Q+  F       G   R  S +           +   E+ +  +  
Sbjct: 182 YKDYYYGSMLTNTAQIHLFGLEPYFDGVLLRIPSAQDPSRLGELIRQDKMFEVFKEHHRW 241

Query: 239 E 239
           +
Sbjct: 242 Q 242


>gi|227504819|ref|ZP_03934868.1| prolyl-tRNA synthetase [Corynebacterium striatum ATCC 6940]
 gi|227198669|gb|EEI78717.1| prolyl-tRNA synthetase [Corynebacterium striatum ATCC 6940]
          Length = 591

 Score =  129 bits (323), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 39/234 (16%), Positives = 83/234 (35%), Gaps = 11/234 (4%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +        GV  W   G +    + + +R ++     +E+  P 
Sbjct: 19  DAEVLSHKLLVRAGYVR---RAAPGVYTWLPLGLRTLTKIENIVREEMNAIGGQEMLFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++ +  W  Y  N+F +K      +      L P +             SY++ 
Sbjct: 76  LLPREPYELTDRWTEYGDNLFRLKD-----RKGADMLLGPTHEEMFAGAVKDMYSSYKDF 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKD 417
           PV L +  + YR+E      G++R R F   D++ F  T E +    ++      +I+  
Sbjct: 131 PVTLYQIQTKYRDEERPR-AGILRGREFVMKDSYSFDMTDEGLDESYMRHRKAYQNIFNR 189

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
              +  + K ++       S+     +       +   +      +   V    
Sbjct: 190 LEIDYAICKATSGAMGGSASEEFLAVSPAGEDTFVRATEGDYAANVEAVVTPAP 243



 Score = 82.1 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 66/163 (40%), Gaps = 12/163 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG--- 544
           R  + G I Q+       F+   ++ + ++  P M    +   + R + ++ E       
Sbjct: 429 RGIELGHIFQLGRKYTKAFDVQILDENGKRAVPTMGSYGI--GVSRMMAVLAEQQADEKG 486

Query: 545 -NLPLWLSPIQAIVTTITSSA--VEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSI 600
              P+ ++P Q  V      A  +E  Q++   L +  + +  D R + +   K ++  +
Sbjct: 487 LRWPVDVAPFQVHVAVANKDAAALEAGQKLVEDLDAAGIEVLFDDRPKVSPGVKFKDAEL 546

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             +P I I G +  ++  I +R  G  T + V   + +  L +
Sbjct: 547 LGMPFIAILG-RSFADGIIELRIRGGETLE-VPADEIVDKLLE 587


>gi|253682477|ref|ZP_04863274.1| phosphoribulokinase family protein [Clostridium botulinum D str.
           1873]
 gi|253562189|gb|EES91641.1| phosphoribulokinase family protein [Clostridium botulinum D str.
           1873]
          Length = 551

 Score =  129 bits (323), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 51/214 (23%), Positives = 101/214 (47%), Gaps = 3/214 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
           + I +T  +    +    +   ++ + ++      ++    NGK+ +LS  V  +G+ E+
Sbjct: 2   NKINITLKNNKKISINKGSNLYEILKQLNLE-ETTSILGWFNGKIHELSYEVKEDGNFEL 60

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           + P+   S+     +   I+ ++V+ ++P  +V I   +  G + +  K+ P + +++  
Sbjct: 61  VDPKRKISILSYMRTLQFILIKSVRELYPNAKVRIEHSLSKGIFGEIHKDTPLTINDIEN 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           I+ KM+EII +D    K  +S EKA E+F+      K+ + + +     VTLY     +D
Sbjct: 121 IKSKMREIIEKDIIIHKLSVSKEKAIEIFKKYHMDAKLRMFKHV-DNNKVTLYELDGMYD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRP 215
              GP   STG+VK F  +    G   RG +   
Sbjct: 180 YFYGPMAYSTGKVKMFDLMYYSPGFILRGPTIDN 213


>gi|126698136|ref|YP_001087033.1| putative phosphoribulokinase/uridine kinase [Clostridium difficile
           630]
 gi|255099663|ref|ZP_05328640.1| putative phosphoribulokinase/uridine kinase [Clostridium difficile
           QCD-63q42]
 gi|255305546|ref|ZP_05349718.1| putative phosphoribulokinase/uridine kinase [Clostridium difficile
           ATCC 43255]
 gi|115249573|emb|CAJ67390.1| putative uridine kinase [Clostridium difficile]
          Length = 555

 Score =  129 bits (323), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 44/264 (16%), Positives = 94/264 (35%), Gaps = 12/264 (4%)

Query: 6   KLTFP-DGSIKNFP-----VHATGSDVAESISRSLAKKAVAVAINGKVCDLS-DPVREGS 58
           K+    +G  K +            D+A+              ++ K+ +L+    ++  
Sbjct: 3   KINLKIEGKDKEYSLEENSPGIRLGDIAKEFCDEHKGYITLAVVDNKLKELNCRVKKDCE 62

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           I  +   +     V     + I   A + I+ + +V I   + DG Y +   ++     +
Sbjct: 63  INFLDTTNEDGERVYFRVMSFIFVMACREIFWDSRVTIEHSLSDGLYCEVHIDRKLKEAD 122

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           +  I+ KM+EI+  D    K  ++  +A  +FE+ +   K E+L      ++  +Y+   
Sbjct: 123 VENIKNKMKEIVNNDYVIEKIEVTRNEAISIFENNEMYEKAELL-KYKEYDSAKVYKCRN 181

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNT----QQELTQY 234
           + D   G  + STG +K F   +   G    G S       +             E  ++
Sbjct: 182 YIDHFYGYMLPSTGYIKSFDIKLYNGGVIILGPSEEDKTLPMKFVPQPKLSSVYYEAEEW 241

Query: 235 LYFLEESEKRDHRKLAREMDLFHI 258
              +   +     K+    +   I
Sbjct: 242 SRLMGIDKVVSLNKIIENNEYGDI 265


>gi|254974157|ref|ZP_05270629.1| putative phosphoribulokinase/uridine kinase [Clostridium difficile
           QCD-66c26]
 gi|255091558|ref|ZP_05321036.1| putative phosphoribulokinase/uridine kinase [Clostridium difficile
           CIP 107932]
 gi|255313284|ref|ZP_05354867.1| putative phosphoribulokinase/uridine kinase [Clostridium difficile
           QCD-76w55]
 gi|255515975|ref|ZP_05383651.1| putative phosphoribulokinase/uridine kinase [Clostridium difficile
           QCD-97b34]
 gi|255649066|ref|ZP_05395968.1| putative phosphoribulokinase/uridine kinase [Clostridium difficile
           QCD-37x79]
 gi|260682257|ref|YP_003213542.1| putative phosphoribulokinase/uridine kinase [Clostridium difficile
           CD196]
 gi|260685856|ref|YP_003216989.1| putative phosphoribulokinase/uridine kinase [Clostridium difficile
           R20291]
 gi|306519180|ref|ZP_07405527.1| putative phosphoribulokinase/uridine kinase [Clostridium difficile
           QCD-32g58]
 gi|260208420|emb|CBA60968.1| putative phosphoribulokinase/uridine kinase [Clostridium difficile
           CD196]
 gi|260211872|emb|CBE02305.1| putative phosphoribulokinase/uridine kinase [Clostridium difficile
           R20291]
          Length = 555

 Score =  129 bits (323), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 44/264 (16%), Positives = 94/264 (35%), Gaps = 12/264 (4%)

Query: 6   KLTFP-DGSIKNFP-----VHATGSDVAESISRSLAKKAVAVAINGKVCDLS-DPVREGS 58
           K+    +G  K +            D+A+              ++ K+ +L+    ++  
Sbjct: 3   KINLKIEGKDKEYSLEENSPGIRLGDIAKEFCDEHKGYITLAVVDNKLKELNCRVKKDCE 62

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           I  +   +     V     + I   A + I+ + +V I   + DG Y +   ++     +
Sbjct: 63  INFLDTTNEDGERVYFRVMSFIFVMACREIFWDSRVTIEHSLSDGLYCEVHIDRKLKEAD 122

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           +  I+ KM+EI+  D    K  ++  +A  +FE+ +   K E+L      ++  +Y+   
Sbjct: 123 VENIKNKMKEIVNNDYVIEKIEVTRNEAISIFENNEMYEKAELL-KYKEYDSAKVYKCRN 181

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNT----QQELTQY 234
           + D   G  + STG +K F   +   G    G S       +             E  ++
Sbjct: 182 YIDHFYGYMLPSTGYIKSFDIKLYNGGVIILGPSEEDKTLPMKFVPQPKLSSVYYEAEEW 241

Query: 235 LYFLEESEKRDHRKLAREMDLFHI 258
              +   +     K+    +   I
Sbjct: 242 SRLMGIDKVVSLNKIIENNEYGDI 265


>gi|313681998|ref|YP_004059736.1| prolyl-tRNA synthetase [Sulfuricurvum kujiense DSM 16994]
 gi|313154858|gb|ADR33536.1| prolyl-tRNA synthetase [Sulfuricurvum kujiense DSM 16994]
          Length = 567

 Score =  129 bits (323), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 42/221 (19%), Positives = 92/221 (41%), Gaps = 11/221 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  +       ++++   H  L+R      + +  +G+  +   G ++ + + + +  
Sbjct: 3   FSKAYIPTTKEAPKDAQLPSHIYLSRAG---FVTQVAAGLYNFLPMGKRVLRKIETIINE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++   D +E++   V    LW++SG  + +   +   +   D +     F L P +    
Sbjct: 60  EMAACDAQEVDLSFVTPAELWEESGRIEKFGKELLRFRDRKDNL-----FVLGPTHEEMM 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
           V +  + + SY++LP+ L +  + +R+E      GLMR R F   D + F +  E +  E
Sbjct: 115 VNIVRNRVTSYKQLPLNLYQIKTKFRDEARPRF-GLMRGREFVMKDGYSFHSSNEDLDRE 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
              +      I +  G E  +V+  +      GS  L   A
Sbjct: 174 FDAMEAAYKRILERLGLEFRIVEADSGAIGGTGSKELMVLA 214



 Score = 92.9 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 66/185 (35%), Gaps = 16/185 (8%)

Query: 467 VLLGEGAFY-GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
           V  G+G  + G K  +     +G  ++ GT+          +       + +  P ++  
Sbjct: 388 VQEGDGCPHCGGKILHTKGIEVGHIFKLGTVYSAPLKAEFLD------ENGRSQPFIMGT 441

Query: 526 AVFGSIERFIGIMIE-NFKGNLPLWLSPIQAIVTTIT------SSAVEYAQEIANLLKSH 578
              G   R +  +IE +      +W       +  +        S + YA+E+   L+S 
Sbjct: 442 YGMGVS-RLVAAVIEQHHDEKGCIWTHATAPYLVNVMVSNIKEESHMAYAEELYASLQSR 500

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
            +    D R E   +K+ +  +   P  +I G KE    S+ I    +     V   D +
Sbjct: 501 GIETMLDDRKERFGFKMSDAELIGFPYTVIVG-KELENGSVQIMVRATREMITVDAADVL 559

Query: 639 PILTK 643
             + +
Sbjct: 560 SKIEE 564


>gi|312876823|ref|ZP_07736801.1| AAA ATPase [Caldicellulosiruptor lactoaceticus 6A]
 gi|311796442|gb|EFR12793.1| AAA ATPase [Caldicellulosiruptor lactoaceticus 6A]
          Length = 554

 Score =  129 bits (323), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 41/241 (17%), Positives = 90/241 (37%), Gaps = 5/241 (2%)

Query: 2   PSDIKLTFPDGSIKN-FPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
            + +++ F D ++     V                   VA  ++ ++ +L   + R+  +
Sbjct: 5   SNTVRVFFEDANVYEDVEVGTNLLSFVPRFESYFKSPIVAAKVDNEIKELKYVISRDCKV 64

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           + I       + + R S   ++  A + ++ E  V +   +  G Y + +  +  + +++
Sbjct: 65  KFIDMTQEDGMRIYRRSLIFVLIVATRMLFKEA-VNVQHSLSKGLYCEVE-NRKLTVEDI 122

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             I++KM+ I+ +D  F ++ +S ++A  LFE K    K   +      E+V +Y  G++
Sbjct: 123 ELIKQKMKWIVEQDFQFRREKVSKDEAVRLFEEKGFYDKARTI-KFSENEHVYIYYCGDY 181

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            D   G  V STG +K F  +    G                         +        
Sbjct: 182 VDYFYGHLVPSTGYLKIFDLIQYHDGMVLLYPDKSDPFKLQEFIENKKLFAVYHEYKNWG 241

Query: 240 E 240
            
Sbjct: 242 R 242


>gi|116748707|ref|YP_845394.1| prolyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
 gi|152112959|sp|A0LHQ7|SYP_SYNFM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|116697771|gb|ABK16959.1| prolyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
          Length = 581

 Score =  129 bits (323), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 46/216 (21%), Positives = 85/216 (39%), Gaps = 11/216 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +       +E+E   H  L R      I    +GV      G ++ + + + +R +
Sbjct: 4   SKYFIHTLFEVPKEAETPSHILLLRGCY---IHPVAAGVYSLLPLGHRVAEKIKAILREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +   +  E+  P +    LW++S  +      +F +K   D     R F L   +     
Sbjct: 61  LNAIEGLEVTMPVLNPAELWKKSSRYYDIGQELFRIKDRKD-----REFVLAMTHEEVIT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    L+SYR LPV L +  +  R+E      GL+RVR F  +DA+ F       +   
Sbjct: 116 DIARQFLRSYRHLPVMLYQIQTKIRDEARPR-AGLLRVREFFMNDAYSFHPDFADLDAYY 174

Query: 406 -KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            +I N  + I+   G   + ++  +      GS   
Sbjct: 175 PRIFNAYLRIFTRCGLTTVPIEADSGIMGGTGSHEF 210



 Score = 74.8 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 28/166 (16%), Positives = 63/166 (37%), Gaps = 11/166 (6%)

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF----KGNLP 547
               +   +      +A Y+++   +   V++     G +ER +   +E +      + P
Sbjct: 410 HTFKLGTKYTAAESMDATYLDAAGNQQR-VVMGCYGIG-VERLMASAVEQWHDEGGMSFP 467

Query: 548 LWLSPIQAIV--TTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPI 605
             ++P Q I+         +E AQ +   L   H     D R+E+   K+++  +  +PI
Sbjct: 468 YSIAPFQVILCSLGRKPEILEAAQALYERL-GAHYDTIYDDRDESPGVKLKDADLLGVPI 526

Query: 606 IIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
            ++   K   +  + I+   +         + +  L  E +  D Q
Sbjct: 527 RVVVSQKLLQKGEVEIKVRRTGVVIVCPRDELLETL--ERIVADLQ 570


>gi|315187159|gb|EFU20916.1| TGS domain-containing protein [Spirochaeta thermophila DSM 6578]
          Length = 548

 Score =  129 bits (323), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 46/219 (21%), Positives = 97/219 (44%), Gaps = 14/219 (6%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAE----SISRSLAKKAVAVAINGKVCDLSDPVR-EG 57
           ++I++  P+G +   P      D+ +     I        VA  +N ++  L+  +    
Sbjct: 2   NEIRVMLPNGHVLEVPYGTRVGDLLKTHLPDIHP------VAARVNNELTSLTYKLEFNS 55

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSD 117
           SIE +T + P  + + R S   ++A A       +++ IG  + DG++Y     +  +  
Sbjct: 56  SIEPVTFDQPEGMIIYRASLCFLLAMAAHRR--GLRLIIGHSLGDGYFYTLRDREDVTPR 113

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           E+A ++++MQ++I  D P  ++ LS++ A   F+ + +   V++L +   +  + ++   
Sbjct: 114 EVALLQEEMQDLIRSDIPIQRKVLSYQDAIWEFQGRDQMQTVKLL-TFKNENKIPVFFCD 172

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPM 216
            + DL   P V  TG +  F       G   R   +   
Sbjct: 173 TYCDLATIPLVPRTGLLNGFRLQHFPPGFVLRFPRHPEQ 211


>gi|290890493|ref|ZP_06553568.1| hypothetical protein AWRIB429_0958 [Oenococcus oeni AWRIB429]
 gi|290479889|gb|EFD88538.1| hypothetical protein AWRIB429_0958 [Oenococcus oeni AWRIB429]
          Length = 570

 Score =  129 bits (323), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 47/255 (18%), Positives = 101/255 (39%), Gaps = 16/255 (6%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        E++ + H  + R   +  +A    G+  +     +I   + S +R +
Sbjct: 4   SKIFIPTEKEVPAEAQVKSHIFMLRAGFIRQVA---GGIYAYLPLANRIINKIESIIREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +   D  E+  P+++   LW++SG + +Y   M+ +K   D     R F + P +     
Sbjct: 61  MSRIDANEMLMPEMIPAELWKESGRFYTYGPQMYQLKDRHD-----REFIMAPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            + +  +KSY++LP+ L +    +R+E     +GL+R R F   DA+ F + ++  ++  
Sbjct: 116 KIISDEIKSYKKLPLILYQIQQKFRDELRPK-NGLLRGREFIMKDAYSFSSDQKGLDDAY 174

Query: 406 KIHNL-IISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            +       I+   G +   +   +       S      A       +    NS +   N
Sbjct: 175 DLIESAYKRIFDRVGLDYREIIADSGSMGGKDSAEF--QAIAATGEDIIAYSNSGKYAAN 232

Query: 465 TGVLLGEGAFYGPKF 479
             +      F+  K 
Sbjct: 233 IEMAEE---FFEKKI 244



 Score = 74.8 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 58/161 (36%), Gaps = 7/161 (4%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPL 548
           +  + G I       +      + +   K   +++     G       I  ++      +
Sbjct: 405 KGIEIGHIFKLGTFYTSKMGGQIQNEKGKLSDIIMGCYGIGISRLLSAIAEQSNDPKGFI 464

Query: 549 WL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
           W    +P    + T+     S V  A++I   L+     +  D R E    K  +  +  
Sbjct: 465 WPKAVAPFNVHLITMNTKNESQVNLAKQIDKNLQEAGFEVLVDDRKERPGVKFADSDLIG 524

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           IPI ++ G + A ++ + ++  G  +T  VS  + I  L  
Sbjct: 525 IPIRVVVGRQ-ADQQIVEVKARGQESTNDVSTDNLIAFLKD 564


>gi|284925806|gb|ADC28158.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni IA3902]
          Length = 569

 Score =  129 bits (323), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 42/229 (18%), Positives = 92/229 (40%), Gaps = 11/229 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            T+          +++    +  L R      + + GSG+  +   G ++   + + ++ 
Sbjct: 4   FTKFYAPSLKEAPKDASLPSYIFLTRAG---FVEQIGSGLYNFLPLGKRVLDKIKNIVKE 60

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +E+N   +    LWQ+SG ++ +   +   K   +       F L P +    
Sbjct: 61  EMDKAGAQEVNLSFITPASLWQESGRYNVFGKELLRFKDRKEN-----EFVLGPTHEEAM 115

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           +++  + + SY++LP+ L + G  +R+E      GL+R R F   D + F   E+     
Sbjct: 116 LSLVKNKITSYKQLPLHLYQIGLKFRDEARPRF-GLLRCREFLMKDGYSFHANEEDLGRE 174

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
            + ++     I +  G +   V+  +      GS      A+N    +L
Sbjct: 175 FELMYKTYSQILQRMGLDFRAVEADSGAIGGSGSKEFMVLAKNGEDDIL 223



 Score = 79.1 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 59/165 (35%), Gaps = 9/165 (5%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNLP 547
           +  + G I       S+         + K  P  +     G   R + +  E +      
Sbjct: 407 KGIEVGHIFKLGQKYSKAMNANFLDENGKSQPFYMGCYGIGVS-RLLAVATEASHDEKGC 465

Query: 548 LW---LSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W   L+P    +         A+E+A ++   L +  L +  D RNE    K+ +  + 
Sbjct: 466 IWNKTLAPFVLEIIVSNLKDEKALEFANKLYEDLTNLGLEVLLDDRNERFGVKMNDFELM 525

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
             P  ++ G K   +  I + +      + +   + + IL K+ L
Sbjct: 526 GFPYALVVG-KGLEKNEIELIQREGLIKELIKTDELMEILKKKVL 569


>gi|15616855|ref|NP_240068.1| prolyl-tRNA synthetase [Buchnera aphidicola str. APS (Acyrthosiphon
           pisum)]
 gi|11134948|sp|P57333|SYP_BUCAI RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|25293219|pir||B84958 proline-tRNA ligase (EC 6.1.1.15) [imported] - Buchnera sp.
           (strain APS)
 gi|10038919|dbj|BAB12954.1| prolyl-tRNA synthetase [Buchnera aphidicola str. APS (Acyrthosiphon
           pisum)]
          Length = 572

 Score =  129 bits (323), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 44/257 (17%), Positives = 99/257 (38%), Gaps = 11/257 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       +++   H+ + R   +   +   SG+  W   G ++ + + + +  
Sbjct: 3   TSQYLLSTSKDIPYDAKIISHQLMIRSGMIRKTS---SGLYVWLPTGMRVLKKIKNIITT 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           +++  +  EI  P +  ++LW++S   + Y   +          +    F L P N    
Sbjct: 60  EMEKINALEILMPIIQPEYLWKESRRLNLYGEELLRFLD-----RRKNQFILGPTNEEVV 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
                  + SY++LP+ + +  + +R+E      G++R R FT  DA+ F   +      
Sbjct: 115 TNFIGSEIHSYKQLPLTVYQIQTKFRDEIRPRF-GIIRTREFTMKDAYSFHINQSCLENT 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             K ++  I+I+K        VK  +       S      ++N    ++ +        +
Sbjct: 174 YNKFYDSYINIFKKMNLNFCAVKADSGSMGGNISHEFQAFSQNGEDEIVFSNDKLYSSNM 233

Query: 464 NTGVLLGEGAFYGPKFE 480
           N    +    F+  K+ 
Sbjct: 234 NMAESIETIDFFKKKYS 250



 Score = 66.3 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 54/164 (32%), Gaps = 13/164 (7%)

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNLPLWL 550
           + G I       SR     V   +     + +     G I R    +IE +   N  +W 
Sbjct: 410 EIGHIFQLGQKYSRKIQQSVKIKNGNLKNLYMGCYGIG-ITRIAAAVIEQHHDKNGIIWP 468

Query: 551 ---SPIQAIVTTITSSAVEYAQEIA----NLLKSHHLSIETDFRNETINYKIREHSIKKI 603
              +P + ++  I        + IA       K   + +  D R+E       E  +  I
Sbjct: 469 DSIAPFEVVILPINMKKDNKIKIIAHFLYKKFKKTGIDVILDDRDERPGVMFNEVDLIGI 528

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLD----AIPILTK 643
           P  II   +  +  ++  R   +     +++ D     I  L K
Sbjct: 529 PHQIIISKRSINYDNVEYRERKNKENILINIKDIKNFIIQKLKK 572


>gi|260655129|ref|ZP_05860617.1| proline--tRNA ligase [Jonquetella anthropi E3_33 E1]
 gi|260630051|gb|EEX48245.1| proline--tRNA ligase [Jonquetella anthropi E3_33 E1]
          Length = 478

 Score =  129 bits (323), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 63/427 (14%), Positives = 144/427 (33%), Gaps = 65/427 (15%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
            E+   + +  + +  +L   A     ++     G+ +++ +        K+  +     
Sbjct: 8   REQDYSQWYLDIIKVAELADYAPVRGCMVI-RPTGYALWEEIQQKFDAAFKETGHTNAYF 66

Query: 297 PQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P ++      +++ H + +      V  A    K      ++P +      +++  ++S+
Sbjct: 67  PVLIPASFLTKEAEHVEGFAPECAVVTEAGGE-KLEEPLIVRPTSETVIGYMYSKWIQSW 125

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISI 414
           R+LP+ + ++ +V R E    L   +R   F   + H    T E+   E  ++  +   I
Sbjct: 126 RDLPLLINQWANVMRWEKRPRL--FLRTSEFLWQEGHTAHATSEEAVQETERMLEVYRRI 183

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
                                                 D +     + + +      GA 
Sbjct: 184 MT------------------------------------DDLALPVVEGVKSAGERFPGAL 207

Query: 475 YGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
                E ++ D   +  Q GT   +  N    FN  +        +        +G   R
Sbjct: 208 ETYTCETMVSDT--KAVQAGTSHFLGQNFSKAFNIQFQAQDETMQYA---WTTSWGVSTR 262

Query: 534 FIGIMIENFKGN----LPLWLSPIQAIVTTITSSAVE------YAQEIANLLKSH--HLS 581
            IG +I          +P  ++P++A+V  I+    +       A E+A  L        
Sbjct: 263 LIGAVIMTHSDADGLIIPPHVAPVKAVVIPISKDEAKSKELAGKAAELAQSLNKVLGGRF 322

Query: 582 IETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS---LLDA 637
           ++ D +     + +   H  K +P+ I  G+K+ +  ++ + R  +      +   L   
Sbjct: 323 VKVDEQFYMRPSDRFFYHLQKGVPLRIELGEKDDAAGTVRLVRRDTGEKLDAAQGELTTV 382

Query: 638 IPILTKE 644
           +P L +E
Sbjct: 383 VPQLLEE 389


>gi|327312853|ref|YP_004328290.1| phosphoribulokinase/uridine kinase family protein [Prevotella
           denticola F0289]
 gi|326944467|gb|AEA20352.1| phosphoribulokinase/uridine kinase family protein [Prevotella
           denticola F0289]
          Length = 555

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 46/241 (19%), Positives = 93/241 (38%), Gaps = 3/241 (1%)

Query: 1   MPSDIKLTFPDGSI-KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-S 58
           M   +++   +       P+ +T SD+ +  +  +    V+  +N KV  L   V     
Sbjct: 3   MKQVLQIRCKNNKKSLKVPIGSTLSDIYKENNLQMTFGPVSAKVNNKVEGLHYRVYHNKD 62

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           +E +    P  +     S   ++ +AV  ++P   V I   + +G+Y +       + D+
Sbjct: 63  VEYLDLHAPSGIRTYTRSLFLVLCKAVHDLYPGSSVVIDIPVSNGYYCNLKLGHAVTPDD 122

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           + +I  +MQEII    P  +   + E+A E+F    +  K ++L S         Y   +
Sbjct: 123 VRRIRTRMQEIIDARLPIQRFETTTEEAVEMFNRLGDGQKAKLLRS-SGTLYSVYYVLDD 181

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D   G  + +T Q+  F       G   R  S +           +   E+ +  +  
Sbjct: 182 YKDYYYGSMLTNTAQIHLFGLEPYFDGVLLRIPSAQDPSRLGELIRQDKMFEVFKEHHRW 241

Query: 239 E 239
           +
Sbjct: 242 Q 242


>gi|295704483|ref|YP_003597558.1| threonyl-tRNA synthetase 2 (Threonine--tRNA ligase)(ThrRS)
           [Bacillus megaterium DSM 319]
 gi|294802142|gb|ADF39208.1| threonyl-tRNA synthetase 2 (Threonine--tRNA ligase)(ThrRS)
           [Bacillus megaterium DSM 319]
          Length = 113

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 38/106 (35%), Positives = 60/106 (56%)

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           + N++G  PLWL+P+Q  +  I +  VEYA ++ + L+S    +E D R E I  KIRE 
Sbjct: 1   MNNYEGQFPLWLAPVQFKLLPIAAPHVEYAYKVKHELESQGYRVEVDDRIEKIGLKIREA 60

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            + K+P + + GD+E    S+ +R+ G      VS+ +A   L KE
Sbjct: 61  EMLKVPYMAVIGDREVENESLAMRKHGKENIGTVSVKEAAVYLNKE 106


>gi|152992232|ref|YP_001357953.1| prolyl-tRNA synthetase [Sulfurovum sp. NBC37-1]
 gi|166980164|sp|A6Q7Y7|SYP_SULNB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|151424093|dbj|BAF71596.1| prolyl-tRNA synthetase [Sulfurovum sp. NBC37-1]
          Length = 568

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 48/244 (19%), Positives = 92/244 (37%), Gaps = 10/244 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  +        ++    H  L R    F  +  GSG+  +   G K+   + + ++ 
Sbjct: 3   FSRLLIPTTKETPNDATLASHIYLIRGG--FIQSVGGSGLYNFLPLGKKVLDRVRNVVKE 60

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +E++   V    LW++SG ++ Y   +   K   +       F L P +    
Sbjct: 61  ELDKAGCQEVSLSFVTPASLWEESGRYEKYGKELLRFKDRKNN-----EFVLGPTHEEMM 115

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           V +    +KSY++LP+ L +    +R+E      GLMR R F   D + F T E+     
Sbjct: 116 VNLVRQSVKSYKQLPLNLYQINLKFRDEIRPRF-GLMRGREFLMKDGYSFHTSEEDMKRE 174

Query: 405 LKIH-NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             +       I+   G E  +V+  +      GS      A++    ++          I
Sbjct: 175 FDLMEETYKKIFTRLGLEFRVVEADSGAIGGSGSKEFMVLADSGEDTIVVCDNCDYGANI 234

Query: 464 NTGV 467
              V
Sbjct: 235 EAAV 238



 Score = 77.1 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 64/174 (36%), Gaps = 9/174 (5%)

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
            PK    ++   G +      Q+         A +++ +  K  P+++     G      
Sbjct: 396 CPKCGAPMRYTKGIE-AGHIFQLGTQYSEPLGATFLDENG-KAQPMVMGTYGIGVSRLLA 453

Query: 536 GIMIENFKGNLPLWLSP-----IQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNE 589
            I+ +N      +W        +Q IV+ I     V   +++   L +  L +  D R +
Sbjct: 454 AIIEQNHDDRGCIWTKESAPFDLQLIVSNIKDETQVALGEKLYEALTAKGLDVLFDDRKD 513

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
               K++++ +  IP  ++ G K   +  +          ++VS    + ++ +
Sbjct: 514 RFGAKMKDYELLGIPYAVVIGKK-LQDGLVEFISREGLVKEEVSAEAILDVVGE 566


>gi|329120957|ref|ZP_08249588.1| proline--tRNA ligase [Dialister micraerophilus DSM 19965]
 gi|327471119|gb|EGF16573.1| proline--tRNA ligase [Dialister micraerophilus DSM 19965]
          Length = 574

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 50/283 (17%), Positives = 101/283 (35%), Gaps = 19/283 (6%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++           E+    H+ + +   +  I+   SG   +    W+  + + + +  
Sbjct: 3   ASKLYAPTLREIPSEAVVISHKYMLKAGMIRKIS---SGFYSYLPLAWRSIKKIENIIHE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++   + +EI         +WQQ+G WD Y   MF +K      +  R + L P +    
Sbjct: 60  EMAKIESQEILMSIAQPAEIWQQTGRWDVYGEEMFRLKD-----RHERDYCLAPTHEELV 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             + +    SY++LPV L +  + YR+E      GLMR R F   DA+ F   E+  ++ 
Sbjct: 115 TTLVHIDTFSYKQLPVSLYQIQNKYRDEKRPRF-GLMRSREFIMKDAYTFDVDEEGLDKQ 173

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +++   +I+   G     V   +       S      AE     ++  +       +
Sbjct: 174 YHDMYDAYTNIFTKCGLNFRTVIADSGAIGGSSSHEFEVLAEAGEADIVYEVDGEFAANV 233

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF 506
              +               LK+ + ++      Q       +F
Sbjct: 234 EAVIPD--------TISCNLKNDLEKEIVATPGQETIEDVCKF 268



 Score = 76.0 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 69/182 (37%), Gaps = 14/182 (7%)

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           G + E+     +G+ ++ GT           N  Y++ +  K  P+++     G      
Sbjct: 397 GKEIEFKKGIEVGQVFKLGT-----KYSESLNCTYLDKNG-KSKPMVMGCYGIGVTRTMA 450

Query: 536 GIMIENFKGNLPLW---LSPIQAIVTTITSSAVEY---AQEIANLLKSHHLSIETDFRNE 589
             + +N   +  +W   ++P + ++    +   E    A+E+   +   +  I  D RNE
Sbjct: 451 ASIEQNHDKDGIIWAVSIAPYEVVIIPANNKNSEIMKVAEELYRNMSKENNEIVFDDRNE 510

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPD 649
               K ++  +   PI +  G K      + I+   +    ++   D    +  ES+  D
Sbjct: 511 RAGIKFKDADLIGYPIRVTIGKKWEENGKVEIKIRRTGEVIEIDYKDCKAKV--ESILDD 568

Query: 650 CQ 651
            +
Sbjct: 569 LR 570


>gi|294101290|ref|YP_003553148.1| prolyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
 gi|293616270|gb|ADE56424.1| prolyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
          Length = 479

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 63/416 (15%), Positives = 145/416 (34%), Gaps = 61/416 (14%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           E    + +  + +  +L   A     ++     G+ +++++  +     K+  +     P
Sbjct: 9   ETDYSQWYLDIIKVAELADYAPVRGCMVI-RPTGYSLWESIQKHFDDAFKETGHVNAYFP 67

Query: 298 QVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
            ++     + ++ H + +      V  A   + +     ++P +      +++  ++S+R
Sbjct: 68  VLIPNSFLEKEAEHVEGFSPECAVVTHAGGELLE-EPLVVRPTSETVIGHMYSKWIQSWR 126

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIY 415
           +LP+ + ++ +V R E    L   +R   F   + H    T+E+   E LK+  +   I 
Sbjct: 127 DLPILINQWANVMRWEKRPRL--FLRTSEFLWQEGHTAHATEEEAMEETLKMLEVYRRIM 184

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
            +     ++V   T  E+                                      GA  
Sbjct: 185 TEILAIPVIVGEKTAGERF------------------------------------PGAVN 208

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
               E ++ D   +  Q GT        SR  AF +   ++K          +G   R I
Sbjct: 209 TYTCEAMMSD--KKALQAGTSHFLGQNFSR--AFDIQFQNQKGEQEYAWTTSWGVSTRLI 264

Query: 536 GIMIENFKGN----LPLWLSPIQAIVTTIT-------SSAVEYAQEIANLLKSH--HLSI 582
           G +I     N    LP  ++P+Q  +  I+          +  A E ++ L         
Sbjct: 265 GALIMTHSDNDGLILPPRVAPVQVAILPISTNDSVMEEQLLPRALEFSDKLDQMLGGRFT 324

Query: 583 ETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
             D + +     +   H  K +P+ +  G+K+ +  ++   R  + + + +   + 
Sbjct: 325 FVDKQFHMRPGDRFFYHLQKGVPLRLELGEKDLAAGTVRAVRRDTGSKEDIPFENV 380


>gi|301300275|ref|ZP_07206484.1| proline--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
 gi|300852116|gb|EFK79791.1| proline--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
          Length = 570

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 44/221 (19%), Positives = 89/221 (40%), Gaps = 11/221 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  +        ++E   H+ + R   +  I    +G+  +    +++ + + + +R +
Sbjct: 4   SQMLIPTLKEIPSDAEVVSHQLMLRGGYIKQI---TAGMYAYLPLAYRVMKKIENIIREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +   D  E+  P V+   LWQ+SG +++Y   +F +K      +  R F L P +     
Sbjct: 61  MDRIDAVEMLVPAVVPAELWQESGRYETYGPTLFKLKD-----RHERDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    +KSY++LP+ L +    YR+E      GL+R R F   D + F   +    +  
Sbjct: 116 TIVRDAIKSYKKLPLYLYQIQMKYRDENRPRF-GLLRGREFLMLDGYSFHVDDASMEKVF 174

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
                    I++  G +   +   +       S      AE
Sbjct: 175 NDTDKAYQRIFERCGLDFRGIIADSGAMGGNRSKEFQAIAE 215



 Score = 77.9 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 63/168 (37%), Gaps = 12/168 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I Q+         A  ++ +  +  P+ +     G       I+ ++   N  
Sbjct: 403 RGIEIGHIFQLGTRYSESLGADVLDENG-RQVPMRMGCYGIGVSRLLSAIVEQHNDENGI 461

Query: 548 LWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            W    +P    V  +     +  E ++++  +L+     +  D R E    K  +  + 
Sbjct: 462 AWPREIAPFDIHVVPVNVKNDTQRELSEKVTAMLEDAGYQVLVDDRKERAGVKFADSDLI 521

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA---IPILTKESL 646
            +PI I  G K A E  + I+   +    +V L +    + IL  E++
Sbjct: 522 GLPIRITVGKK-ADEGIVEIKLRQNGEKIEVKLEELLNSVKILFNETI 568


>gi|72080721|ref|YP_287779.1| prolyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448]
 gi|114152215|sp|Q4A7Y3|SYP_MYCH7 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|71913845|gb|AAZ53756.1| prolyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448]
          Length = 479

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 65/397 (16%), Positives = 132/397 (33%), Gaps = 55/397 (13%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEE-INTPQVLDQ 302
           + +  +  + DL +       + F    G+KI++ ++  +         E +  P ++ Q
Sbjct: 16  KWYVDVITQADLMNYGPIKGTIYF-KPLGYKIWENIVKIVNAYFVKQKIENVYFPLLIPQ 74

Query: 303 HL-WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
               ++  H + +   +  +    D       + ++P +       F   +     LP++
Sbjct: 75  DFIEKEKKHIEGFAPELLTITKVGDKNLVENIY-IRPTSELLFADYFKAEIAKNNILPIK 133

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           L ++  V R E   + +  +R   F   + H     +   N+  K        +      
Sbjct: 134 LNQWSQVLRWEK--TTNPFLRNTEFLWQEGHTIHASKVEANQFAKKIARFYKYF------ 185

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
                                     ++  L     S Q    T      GA      E 
Sbjct: 186 --------------------------LENYLAIPVISGQK---TEREKFAGAVNTYTVEA 216

Query: 482 ILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI- 539
           ++++   R  Q  T   +  N    F  FY N  ++   P    +  +G   R IG ++ 
Sbjct: 217 MMQNF--RALQSATAHFLGQNFAKNFEIFYKNKENKSQIPF---QTSWGLSTRLIGAIVM 271

Query: 540 ---ENFKGNLPLWLSPIQAIVT----TITSSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
              ++     P  ++PIQ  +             +A+ IA +LK+  ++ + D  ++ I 
Sbjct: 272 VHSDDNGLIFPPKIAPIQVDILEFFSKKNQEVKIFAKRIAKILKNAKIAYKIDDTDQQIG 331

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           YKI    +   PI I  G  E     I + R  +   
Sbjct: 332 YKINNSEVHGAPIRIEIGPNEVKNNQICLVRRDNHQK 368


>gi|269791928|ref|YP_003316832.1| prolyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM 6589]
 gi|269099563|gb|ACZ18550.1| prolyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM 6589]
          Length = 478

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 63/419 (15%), Positives = 147/419 (35%), Gaps = 63/419 (15%)

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
            + +  + R  +L   A     ++     G+ +++++  +     K+  +     P ++ 
Sbjct: 13  SQWYLDVIRAAELADYAPVRGCMVI-RPTGYALWESIQRHFDEAFKETGHVNAYFPLLIP 71

Query: 302 QHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
               + ++ H + +      V  A     +     ++P +      +++  ++S+R+LP+
Sbjct: 72  NSFLEREAQHVEGFAPECAVVTHAGGDELE-EPLVVRPTSETVIGHMYSKWVQSWRDLPI 130

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFG 419
            + ++ +V R E    L   +R   F   + H    T+E+   E L++  +         
Sbjct: 131 LINQWCNVMRWEKRPRL--FLRTSEFLWQEGHTAHATREEAMEETLRMLGVY-------- 180

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
                                    E IMK VL     + +    +      GA      
Sbjct: 181 -------------------------ETIMKDVLALPVVTGEK---SEGERFPGADNTFTC 212

Query: 480 EYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           E ++ D   +  Q GT   +  N    F+  + +   E  +        +G   R IG +
Sbjct: 213 EAMMSDR--KALQAGTSHFLGQNFAKAFDIRFQDRDGEVKYA---WTTSWGVSTRLIGAI 267

Query: 539 I----ENFKGNLPLWLSPIQAIVTTITSSA-------VEYAQEIANLLKSH-HLS-IETD 585
           I    ++    LP  ++P++  +  I++            A E+   ++       +  D
Sbjct: 268 IMTHSDDDGLILPPRVAPVKVALLPISTDQDLISSSLEPKAMELKAAIEDRIGPRTVALD 327

Query: 586 FR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            + +   + +   H  K +P+ I  G KE   R++ +    +     V +  A   + +
Sbjct: 328 RQYHLRPSDRFFSHLQKGVPLRIELGQKELENRTVRLVCRDNGERIDVPMEGAPERVAE 386


>gi|86156454|ref|YP_463239.1| prolyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|114152166|sp|Q2ILX2|SYP2_ANADE RecName: Full=Prolyl-tRNA synthetase 2; AltName: Full=Proline--tRNA
           ligase 2; Short=ProRS 2
 gi|85772965|gb|ABC79802.1| prolyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 510

 Score =  128 bits (322), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 58/430 (13%), Positives = 128/430 (29%), Gaps = 70/430 (16%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
             E+    + ++ +  DL   +     ++     G+ +++ +   +    K   +     
Sbjct: 14  RAENFSEWYLEVIKAADLAESSSVRGCMVI-KPWGYALWEHVQRVLDGMFKATGHVNAYF 72

Query: 297 PQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDL---------RTFALKPMNCPGHVA 346
           P  +   L + ++ H + +      V       +D              ++P +      
Sbjct: 73  PLFIPLSLLEKEAAHVEGFAKECAVVTHHRLEARDGKLVPVGELEEPLIVRPTSETIIGE 132

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
            F   ++SYR+LP+ + ++ +V R E        +R   F   + H     E        
Sbjct: 133 SFARWVQSYRDLPLLINQWANVVRWEMR--TRMFLRTAEFLWQEGHTAHATEPEA----- 185

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
               I    +  G                             +   + +         T 
Sbjct: 186 ----IDETMQMLGIYA--------------------------RFAEEWMALPVVQGEKTE 215

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
                GA      E +++D   +  Q GT        ++  A  +    EK         
Sbjct: 216 SERFPGAVRTYCIEAMMQDR--KALQAGTSHFLGQNFAK--ASGIQFQDEKGTLTHAWTT 271

Query: 527 VFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSS------AVEYAQEIANLLK 576
            +G   R IG MI    ++     P  L+P Q ++  +          + +   +   L+
Sbjct: 272 SWGLSTRMIGAMIMTHGDDDGMVCPPRLAPQQVVIIPVIQKPEVREQVLAWCTALKRELE 331

Query: 577 SHHL-----SIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI--RRFGSTTT 629
           +         +  D R+     K  E   K  P+ +  G ++  + ++ +  R       
Sbjct: 332 AQTYAGAPVRVHLDARDLQGAKKSWEWIKKGTPVRLEVGPRDIEKGAVFMGRRDRKPREK 391

Query: 630 QKVSLLDAIP 639
           Q V   + + 
Sbjct: 392 QSVPRAELVA 401


>gi|78185232|ref|YP_377667.1| prolyl-tRNA synthetase [Synechococcus sp. CC9902]
 gi|114152270|sp|Q3AWR9|SYP_SYNS9 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|78169526|gb|ABB26623.1| Prolyl-tRNA synthetase [Synechococcus sp. CC9902]
          Length = 593

 Score =  128 bits (322), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 62/290 (21%), Positives = 106/290 (36%), Gaps = 11/290 (3%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+E   H+ L R   +  I   GSG+  +    WK+ Q + + +R ++     +E   PQ
Sbjct: 17  EAEIASHQLLLRGGYIRRI---GSGIYGYLPLMWKVIQRITAIVRDELNTAGAQETLLPQ 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W  Y A    +   +D  +  R   L P +     ++    L+SY++L
Sbjct: 74  LHPAELWQRSGRWQGYTAGEGIMFHLED--RQGRELGLGPTHEEVVTSLAGELLQSYKQL 131

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKD 417
           PV L +  + +R+E      GLMR R F   DA+ F   E        ++      I++ 
Sbjct: 132 PVNLYQVQTKFRDEIRPRF-GLMRGREFIMKDAYSFHANEADLQNTYLEMDQAYRRIFER 190

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA--FY 475
            G   + V   +       S      A+     +L +   +        +     A    
Sbjct: 191 CGLAAVPVDADSGAIGGAASQEFMVTADAGEDLILLSDDGTYAANQEKAISTPSKAIPLE 250

Query: 476 GPKFE-YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIH 524
           G   E     D    D  C +     +   +   F          P++I 
Sbjct: 251 GASMELISTPDETSIDVLCRSHGWHQSQLIKVLLFIARLDDGVEQPLLIS 300



 Score = 80.6 bits (197), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 64/180 (35%), Gaps = 11/180 (6%)

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG 529
           GE   + P  E  L +  G +      Q+        ++ + N   +  H  M      G
Sbjct: 415 GEACVHNP--EAHLIEKRGIEV-GHIFQLGRKYSEAMDSRFTNEAGKTEHFWM-GCYGIG 470

Query: 530 SIERFIGIMIENFKGNLPLWLS---PIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIE 583
                   + ++       W +   P +AIV        +  E  + +   L +  +   
Sbjct: 471 ISRLAQAAVEQHHDDAGICWPAAIAPYEAIVVVANMQDQTQAELGESLYKQLLAAGVDAL 530

Query: 584 TDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            D R E    K ++  +  IP  ++ G ++AS+  + +    +   QK+   DA+  L +
Sbjct: 531 FDDRKERAGVKFKDADLIGIPWRVVVG-RDASDGVVELVERANRAVQKLPHADALKELLR 589


>gi|281357583|ref|ZP_06244070.1| prolyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548]
 gi|281315840|gb|EFA99866.1| prolyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548]
          Length = 575

 Score =  128 bits (322), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 45/198 (22%), Positives = 89/198 (44%), Gaps = 11/198 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++    +     ++++   H+ L R   +  ++    G+      G +I + + + +R +
Sbjct: 2   SKLVGRRIKEDPKDAKTVSHKFLVRGGYVRPVSA---GIYSLLPLGKRIVEKIEAIIREE 58

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +   + +E+  P VL   LW++SG ++S  A +   +  +D         L   +  G V
Sbjct: 59  MNRIEGQEVLMPVVLPADLWKESGRYESVGAELLRFRDRNDKP-----MILAMTHEEGIV 113

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE-QMFNEC 404
            +    L SY++LPV L +  + YR+E      GL+RVR FT  DA+ F T +  +    
Sbjct: 114 HLVRTELNSYKQLPVMLYQIQTKYRDEARPR-AGLIRVREFTMKDAYSFHTDQADLEKYY 172

Query: 405 LKIHNLIISIYKDFGFEK 422
            + H     I++  G + 
Sbjct: 173 YRCHEAYERIFRRVGMKN 190



 Score = 82.9 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 25/153 (16%), Positives = 59/153 (38%), Gaps = 8/153 (5%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I Q+        +  Y++    K HP+++     G       ++ ++     P
Sbjct: 405 RGIEVGNIFQLGTKYTESMHCDYLDRDG-KSHPMIMGCYGIGVGRAMAAVIEQSCDEYGP 463

Query: 548 LWL---SPIQAIVTTITSS---AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W    +P Q  +  I        E  +++   L +  + +  D R E       +  + 
Sbjct: 464 IWPMSIAPYQVELCAINPDKAGVGEACEKLYADLTAAGIEVLYDDRGEKAGSMFSDADLI 523

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
            IP+ ++   K  ++ ++  +  GS   +K+ +
Sbjct: 524 GIPLRLVVSPKTLADNAVEFKVRGSRDAEKLEI 556


>gi|328476615|gb|EGF47114.1| threonyl-tRNA synthetase [Lactobacillus rhamnosus MTCC 5462]
          Length = 111

 Score =  128 bits (322), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 43/104 (41%), Positives = 59/104 (56%), Gaps = 1/104 (0%)

Query: 500 FNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTT 559
           F LP RF   YV    E+  PVMIHR + G++ERFI  + E +KG  P WL+P+QA +  
Sbjct: 1   FMLPDRFGLTYVGKDGEEHRPVMIHRGIVGTMERFIAYLTEIYKGAFPTWLAPVQAEIIP 60

Query: 560 ITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
           + +    EYA+++   L      +E D RNE + YKIRE    K
Sbjct: 61  VNNEAHGEYAEKVRAELAKRGFRVEVDDRNEKMGYKIRESQNSK 104


>gi|282881204|ref|ZP_06289891.1| phosphoribulokinase/Uridine kinase family protein [Prevotella
           timonensis CRIS 5C-B1]
 gi|281305008|gb|EFA97081.1| phosphoribulokinase/Uridine kinase family protein [Prevotella
           timonensis CRIS 5C-B1]
          Length = 553

 Score =  128 bits (322), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 44/217 (20%), Positives = 95/217 (43%), Gaps = 3/217 (1%)

Query: 1   MPSDIKLTFPDGS-IKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-S 58
           M   + +   +   IK+  + +T S+V +     +    +   +N KVC ++  +     
Sbjct: 1   MKQMLHIRCKNNKKIKDVAIGSTLSEVFDEFKLEMPFGPICAKVNNKVCGMNLCLYHNKD 60

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           +E +   +  +      +   I+ +AV  ++   +V I   + +G+Y +       S ++
Sbjct: 61  VEFLDMYNSSAQRNYTRTLFFILCKAVHDLYAGSEVVIDIPVSNGYYINLKIGHEVSEED 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
             +I ++MQ+II    P ++  +  E+A ++FE K +  KV++L SI +   V  ++  +
Sbjct: 121 AVRIRERMQQIIDAKIPIVRYQVPTEEAIKMFEHKGDEAKVKLLRSIGSLYTV-YHQIDD 179

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRP 215
           + D   G  + +TG +  F       G   R  S   
Sbjct: 180 YVDYYYGSLLPNTGDIYLFGLEKYYEGLLLRIPSKEN 216


>gi|227890630|ref|ZP_04008435.1| prolyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
 gi|227867568|gb|EEJ74989.1| prolyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
 gi|300214372|gb|ADJ78788.1| Prolyl-tRNA synthetase (Proline--tRNA ligase) (ProRS)
           [Lactobacillus salivarius CECT 5713]
          Length = 571

 Score =  128 bits (322), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 44/221 (19%), Positives = 89/221 (40%), Gaps = 11/221 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  +        ++E   H+ + R   +  I    +G+  +    +++ + + + +R +
Sbjct: 4   SQMLIPTLKEIPSDAEVVSHQLMLRGGYIKQI---TAGMYAYLPLAYRVMKKIENIIREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +   D  E+  P V+   LWQ+SG +++Y   +F +K      +  R F L P +     
Sbjct: 61  MDRIDAVEMLVPAVVPAELWQESGRYETYGPTLFKLKD-----RHERDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    +KSY++LP+ L +    YR+E      GL+R R F   D + F   +    +  
Sbjct: 116 TIVRDAIKSYKKLPLYLYQIQMKYRDENRPRF-GLLRGREFLMLDGYSFHVDDASMEKVF 174

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
                    I++  G +   +   +       S      AE
Sbjct: 175 NDTDKAYQRIFERCGLDFRGIIADSGAMGGNRSKEFQAIAE 215



 Score = 77.5 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 63/168 (37%), Gaps = 12/168 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I Q+         A  ++ +  +  P+ +     G       I+ ++   N  
Sbjct: 404 RGIEIGHIFQLGTRYSESLGADVLDENG-RQVPMRMGCYGIGVSRLLSAIVEQHNDENGI 462

Query: 548 LWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            W    +P    V  +     +  E ++++  +L+     +  D R E    K  +  + 
Sbjct: 463 AWPREIAPFDIHVVPVNVKNDTQRELSEKVTAMLEDAGYQVLVDDRKERAGVKFADSDLI 522

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA---IPILTKESL 646
            +PI I  G K A E  + I+   +    +V L +    + IL  E++
Sbjct: 523 GLPIRITVGKK-ADEGIVEIKLRQNGEKIEVKLEELLNSVKILFNETI 569


>gi|85374048|ref|YP_458110.1| prolyl-tRNA synthetase [Erythrobacter litoralis HTCC2594]
 gi|123099532|sp|Q2NAH8|SYP_ERYLH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|84787131|gb|ABC63313.1| putative prolyl-tRNA synthetase [Erythrobacter litoralis HTCC2594]
          Length = 514

 Score =  128 bits (322), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 55/388 (14%), Positives = 124/388 (31%), Gaps = 74/388 (19%)

Query: 270 RKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKC---- 323
             G+ I++ +   +  +IK   +E +  P  +    ++ ++ H + +   M  V      
Sbjct: 43  PWGYGIWERIQRLLDDRIKATGHENVYFPIFIPLSNFEREAEHVEGFAKEMAVVTHHRLI 102

Query: 324 --------ADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
                    D   K      ++P +           ++S+R+LP+   ++ +V R E   
Sbjct: 103 GDGEGGLIPDPEAKLEEPLVVRPTSETIFGDAMARWIQSWRDLPLLTNQWANVVRWEMR- 161

Query: 376 SLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
                +R   F   + H    T E+     L +  +  +  ++     ++       E+ 
Sbjct: 162 -TRMFLRTSEFLWQEGHTAHATAEEAKEHTLTMLEVYRAHAEEDLALPVIAGEKPENERF 220

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
            G+   W                                      E +++D  G+  Q G
Sbjct: 221 PGAVETWS------------------------------------IEAMMQD--GKALQAG 242

Query: 495 TIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLW 549
           T      N     N  + +    + +    H   +G   R IG +I    ++    +P  
Sbjct: 243 TSHYLGTNFSEAANIKFQDREGGEKY---CHTTSWGVSTRMIGGVIMTHGDDDGLKVPPR 299

Query: 550 LSPIQAIVTTI------TSSAVEYAQEIANLL---KSHHL--SIETDFRNETINYKIREH 598
           ++P Q ++  +        + + Y +++   L    +      +  D +      K    
Sbjct: 300 IAPYQVVILPMLRDKPEDDALLAYCEDLRGKLITESAMGEPVRVLLDKKPGKAAAKRWNW 359

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGS 626
             K  PI+I  G ++     + + R   
Sbjct: 360 VRKGAPIVIEVGGRDMENGVVSLLRRDE 387


>gi|90961542|ref|YP_535458.1| prolyl-tRNA synthetase [Lactobacillus salivarius UCC118]
 gi|114152204|sp|Q1WUG0|SYP_LACS1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|90820736|gb|ABD99375.1| Prolyl-tRNA synthetase [Lactobacillus salivarius UCC118]
          Length = 571

 Score =  128 bits (322), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 44/221 (19%), Positives = 89/221 (40%), Gaps = 11/221 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  +        ++E   H+ + R   +  I    +G+  +    +++ + + + +R +
Sbjct: 4   SQMLIPTLKEIPSDAEVVSHQLMLRGGYIKQI---TAGMYAYLPLAYRVMKKIENIIREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +   D  E+  P V+   LWQ+SG +++Y   +F +K      +  R F L P +     
Sbjct: 61  MDRIDAVEMLVPAVVPAELWQESGRYETYGPTLFKLKD-----RHERDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    +KSY++LP+ L +    YR+E      GL+R R F   D + F   +    +  
Sbjct: 116 TIVRDAIKSYKKLPLYLYQIQMKYRDENRPRF-GLLRGREFLMLDGYSFHVDDASMEKVF 174

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
                    I++  G +   +   +       S      AE
Sbjct: 175 NDTDKAYQRIFERCGLDFRGIIADSGAMGGNRSKEFQAIAE 215



 Score = 77.5 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 63/168 (37%), Gaps = 12/168 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I Q+         A  ++ +  +  P+ +     G       I+ ++   N  
Sbjct: 404 RGIEIGHIFQLGTRYSESLGADVLDENG-RQVPMRMGCYGIGVSRLLSAIVEQHNDENGI 462

Query: 548 LWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            W    +P    V  +     +  E ++++  +L+     +  D R E    K  +  + 
Sbjct: 463 AWPREIAPFDIHVVPVNVKNDTQRELSEKVTAMLEDAGYQVLVDDRKERAGVKFADSDLI 522

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA---IPILTKESL 646
            +PI I  G K A E  + I+   +    +V L +    + IL  E++
Sbjct: 523 GLPIRITVGKK-ADEGIVEIKLRQNGEKIEVKLEELLNSVKILFNETI 569


>gi|21672515|ref|NP_660582.1| prolyl-tRNA synthetase [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
 gi|25009415|sp|Q8K9S2|SYP_BUCAP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|21623136|gb|AAM67793.1| prolyl-tRNA synthetase [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
          Length = 571

 Score =  128 bits (322), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 42/244 (17%), Positives = 92/244 (37%), Gaps = 15/244 (6%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++   +        ++   H+ + +   +  ++   SG+  W   G ++   +   ++ 
Sbjct: 3   ASKYLFSTLKETPHHAKIISHQLMLKSGMIRKLS---SGIYIWLPTGIRVLNKIKDIIKN 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           +++  +  E+  P V  + LW+ SG    Y   +F      +     + F L P N    
Sbjct: 60  EMRKINALEVLMPVVQPKKLWENSGRLSIYGEELFQFYDRRN-----QKFILGPTNEEVV 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
                + + S++ELP+ + +  + +R+E      G++R R F   DA+ F   +    + 
Sbjct: 115 TNFIRNEINSFKELPLIIYQIQTKFRDEIRPRF-GIVRSREFIMKDAYSFHINKHCLEKT 173

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG---SDALWDDAENIMKGVLDTIKNSSQD 461
               +   S    F   KI  +        +G   S      +EN    ++ +   +   
Sbjct: 174 YN--DFYQSYINIFNKIKIQFRAVNADSGSMGGSISHEFQALSENGEDEIVFSKNTAYAS 231

Query: 462 RINT 465
            INT
Sbjct: 232 NINT 235



 Score = 74.0 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 33/167 (19%), Positives = 63/167 (37%), Gaps = 13/167 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           I +  + G I Q+      + N      H+   H   IH   +G  I R +  +IE N+ 
Sbjct: 403 IKKSIEIGHIFQLGKEYSKKMNVLVQEQHNNYKH---IHMGCYGIGITRIVASVIEQNYD 459

Query: 544 GNLPLWL---SPIQAIVTTITSSAV----EYAQEIANLLKSHHLSIETDFRNETINYKIR 596
            N  +W    +P Q ++  + +       E  + +  +LK   + +    RNE       
Sbjct: 460 DNGIIWPDSIAPFQVVILPLNTKNCIKIKEITENLYKILKKEKIDVILYDRNERPGIMFN 519

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  +  IP  II   +  +E  +  R   +  +  + + +    L K
Sbjct: 520 QIDLIGIPHQIIISPRHINENKVEYRERKNNKSTLIKVKEITYFLKK 566


>gi|42527722|ref|NP_972820.1| prolyl-tRNA synthetase [Treponema denticola ATCC 35405]
 gi|81831353|sp|Q73KJ8|SYP_TREDE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|41818550|gb|AAS12739.1| prolyl-tRNA synthetase [Treponema denticola ATCC 35405]
          Length = 595

 Score =  128 bits (321), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 52/216 (24%), Positives = 89/216 (41%), Gaps = 11/216 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           TQ  +        E+    H+ L R   + ++A   +G+  +   G K F+ +   +R +
Sbjct: 4   TQMYMPTLREIPNEAVVESHKLLLRAGMIRNLA---NGLFAYLPLGLKAFRKVEKIIREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E   P ++   +WQ+SG WDS    +  +K   +     +   + P       
Sbjct: 61  MDAIGCLEFKPPVIVPGEIWQESGRWDSMGPELLRIKNRLN-----QELVVSPTAEEAFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           A+  + L SY+  P+   +  + YR+E     +GLMR R FT  DA+ F T ++  +E  
Sbjct: 116 ALLKNELSSYKNYPLLTYQINTKYRDEIRPR-YGLMRTREFTMKDAYSFHTNDKSLDEAY 174

Query: 406 -KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
                  I I+K  G   I VK  +      GS   
Sbjct: 175 LSFEKAYIKIFKRCGLTVIGVKADSGAMGGSGSQEF 210



 Score = 75.2 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 57/159 (35%), Gaps = 13/159 (8%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL---SPIQ 554
           + +      N  Y++ + ++ HP M      G       I+ E+   +  +W    +P Q
Sbjct: 438 LGYKYTKAMNMTYLDENGKQQHPSM-GCYGIGLDRLTASIVEEHHDEDGIIWPMSIAPFQ 496

Query: 555 AIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
             +  I        E A  +    K   +    D R E    K ++  +  IPI ++ G+
Sbjct: 497 VAIVPIKYEGEMQKE-ADRLYEECKKRGIEALLDDRKERTGVKFKDMDLIGIPIRLVVGE 555

Query: 612 KEASERSIGIRRFGSTTTQKV---SLLDAIPILTKESLP 647
           K      I  +   +  +  V    ++D +    KE L 
Sbjct: 556 KNLPN--IEFKLRKAVESSLVDKDKVVDLVEKTVKEELA 592


>gi|198413603|ref|XP_002126928.1| PREDICTED: similar to prolyl-tRNA synthetase
           (mitochondrial)(putative) [Ciona intestinalis]
          Length = 435

 Score =  128 bits (321), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 76/454 (16%), Positives = 156/454 (34%), Gaps = 49/454 (10%)

Query: 213 NRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKG 272
            R + S+ +  +  +       +     S+ R    L +      I+    G+  +    
Sbjct: 2   RRVLTSKTFPISNGSVHMQENIISTFRASDSRSANLLLQSS---FISPSSKGIYHFMPPL 58

Query: 273 WKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
            K  + L S +  K+K+   +++    +  + +W  SG WD++   +        T    
Sbjct: 59  VKSLEKLTSLIDEKMKNICAQKVQMSMLSGKDIWSLSGRWDAFGKELIT------TNLGE 112

Query: 332 RTFALKPMNCPGHVAVFN---HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQ 388
               L P +      V +   +   SYR LP+RL +  + +RNEP     GL+R R F  
Sbjct: 113 AKHCLSPTHEEAVCKVLSQTFNKFLSYRHLPLRLYQTNTKFRNEPDPQ-RGLLRCREFLM 171

Query: 389 DDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIM 448
           +D + F T ++   E       I   +  F    I V  +      +G D   +   +I+
Sbjct: 172 NDLYTFDTTKKAAVETYNAVCNIYEEF--FKELNIPVTKAQAGSGLIGGDFSHEY--HIL 227

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFY---GPKFEYILKDAIGRDWQCGTIQVDFNLPSR 505
            GV +          N  +    G  +       E  L D + +          +     
Sbjct: 228 AGVGED---------NIFICPDTGQAWNSECTNIEKKL-DTLKQVDGIEVGHTFYLGKKY 277

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFG-SIERFIGIMIE----NFKGNLPLWLSPIQAIVTTI 560
              F  +  +    PV      +G  + R +   +E          P  ++P +  +   
Sbjct: 278 SKMFKTSFLTPDSKPVPCEMGCYGLGVTRILAACLEVLSTESGMRWPHKIAPYKVCLVLP 337

Query: 561 TSSAVEY------AQEIANLLKS---HHLSIETDFRNET-INYKIREHSIKKIPIIIICG 610
            + + E+         + + L++       +  D   +  I +K +  ++   P++I+ G
Sbjct: 338 KTGSKEFENGTAAVNNVFDKLQNYPLLKNDVIIDDTPKRSIGWKTKHANLIGYPLVIVFG 397

Query: 611 D---KEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
                E     + I+      T+ V L + +  +
Sbjct: 398 KGLNSEEQYAEVIIQNPDQQLTKHVPLQNVVEFI 431


>gi|33239959|ref|NP_874901.1| prolyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus str.
           CCMP1375]
 gi|81835850|sp|Q7VD75|SYP_PROMA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|33237485|gb|AAP99553.1| Prolyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus str.
           CCMP1375]
          Length = 603

 Score =  128 bits (321), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 55/209 (26%), Positives = 88/209 (42%), Gaps = 8/209 (3%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E   H+ L R      I    SG+  +    WK+ + + S ++ ++      E   PQ
Sbjct: 17  EAEIVSHQLLIRGG---FIKRVTSGIYAYMPLMWKVIKKITSIVQEELDSKGCLETLLPQ 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW++SG WD Y A    +    D  +  R   L P +      + N  L+SY++L
Sbjct: 74  LHPAELWKESGRWDGYTAGEGIMFHLSD--RQGRELGLGPTHEEVITKIANEFLQSYKQL 131

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKD 417
           PV L +  + +R+E      GLMR R F   DA+ F   E    E   ++++    I+K 
Sbjct: 132 PVNLYQIQTKFRDEIRPRF-GLMRSREFIMKDAYSFHADETNLKETYLEMNDAYEKIFKR 190

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
            G E + V   +       S      AE 
Sbjct: 191 CGLETVAVDADSGAIGGAESREFMVTAEA 219



 Score = 74.8 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 31/177 (17%), Positives = 65/177 (36%), Gaps = 14/177 (7%)

Query: 480 EYILKDA-----IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           +  + D        R  + G I Q+     S   A + N       P  +     G    
Sbjct: 416 DISIHDPKQKLIAKRGIEVGHIFQLGRKYSSCLQASFTNEMG-LEEPFWMGCYGIGISRL 474

Query: 534 FIGIMIENFKGNLPLWL---SPIQAIVTTITSS---AVEYAQEIANLLKSHHLSIETDFR 587
               + +N+  +  +W    +P + IV           E  +++ + LK   + +  D R
Sbjct: 475 AQASVEQNYDQSGIIWPLGIAPFEVIVIVANMKDDLQRELGEKLYSQLKDEGVDVLIDDR 534

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            E    K ++  +  IP  II G ++++   + +    +  ++ +   +AI  L +E
Sbjct: 535 KERAGVKFKDADLIGIPWKIISG-RDSATGIVELVERSTGISKSLKAEEAIKELLEE 590


>gi|237756770|ref|ZP_04585264.1| prolyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense SS-5]
 gi|237691073|gb|EEP60187.1| prolyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense SS-5]
          Length = 162

 Score =  128 bits (321), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 33/169 (19%), Positives = 72/169 (42%), Gaps = 10/169 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  +        ++    H  L R   +  ++    G+  +   G ++ + + + +R+
Sbjct: 3   ASKFFMPTLKENPSDAVVPSHIYLVRGGFIRSLSA---GIYEYLPLGLRVLRKIENIIRK 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
            + D    E+  P +    LW+++G W  Y   +F +K   D       FAL P +    
Sbjct: 60  HMDDSGALEVLLPILTPAELWKETGRWYVYGKELFRLKDRKDA-----EFALGPTHEETI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
             +    ++SY++LP+   +  + +R+E     +GL+R R F   D + 
Sbjct: 115 TDLVRKNVRSYKDLPLNFYQIQTKFRDEARPR-YGLIRGREFIMKDGYS 162


>gi|223939080|ref|ZP_03630964.1| prolyl-tRNA synthetase [bacterium Ellin514]
 gi|223892240|gb|EEF58717.1| prolyl-tRNA synthetase [bacterium Ellin514]
          Length = 576

 Score =  128 bits (321), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 48/249 (19%), Positives = 93/249 (37%), Gaps = 11/249 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            TQ  +        E+E   H+ L R   +  ++    G+  +   G +  + +   +R 
Sbjct: 3   WTQTLIPTLKETPAEAEITSHKLLLRAGLVRKLS---GGLYTFMPLGLRALRKVEQIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P +    +W++SG + +     F V+      +  + + L P +    
Sbjct: 60  EMNRAGALELLMPAMQPPEIWEKSGRYVTASEVFFKVRD-----RAKKEWILGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNE 403
             +    + SYR+LP    +  + +R+E      GLMR + F   DA+ F  T E     
Sbjct: 115 TTLVAGEISSYRQLPKNFYQIQTKFRDEIRPRF-GLMRAKEFIMKDAYSFDVTDELAQIS 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             K+++    I++  G + + V+  T       S      AE     V+     +    I
Sbjct: 174 YQKMYDAYTRIFQRCGLKAVAVEADTGVMGGKFSHEFMVPAETGENEVVYCEACNYSANI 233

Query: 464 NTGVLLGEG 472
              V  G  
Sbjct: 234 EKAVSGGPS 242



 Score = 84.4 bits (207), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 24/163 (14%), Positives = 62/163 (38%), Gaps = 10/163 (6%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G +  +      +  A +++    K  P ++     G       I+ ++   +  
Sbjct: 412 RAIEVGHVFKLGTKYSEKLGALFLDEDG-KQKPAVMGCYGIGVTRTLQAIIEQSNDKDGI 470

Query: 548 LWLSPIQAIVTTITS-------SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           +W   +      IT        + +  A++I + L +  + +  D R+E    K ++  +
Sbjct: 471 IWPVSVAPYTVCITPLGVAAGSATMVLAEKIYSELVAQGIDVILDDRDERPGVKFKDSEL 530

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              PI +  G+K  ++  + ++  G      V   +A+  + +
Sbjct: 531 VGFPIRLGIGEKSLAKGEVELKLRGG-VLTPVKTEEAVAKILE 572


>gi|113955222|ref|YP_731224.1| prolyl-tRNA synthetase [Synechococcus sp. CC9311]
 gi|123031649|sp|Q0I8J8|SYP_SYNS3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|113882573|gb|ABI47531.1| prolyl-tRNA synthetase [Synechococcus sp. CC9311]
          Length = 598

 Score =  128 bits (321), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 46/190 (24%), Positives = 78/190 (41%), Gaps = 5/190 (2%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
            I   GSG+  +    W++ Q ++  +R ++      E   PQ+    LW++SG W  Y 
Sbjct: 31  FIRRVGSGIYAYLPLMWRVLQRVMRIVREEMNQIGALETLLPQLQPAELWEKSGRWQGYT 90

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
           A    +   +D  +  R+  L P +      + +  L+SYR+LPV L +  S +R+E   
Sbjct: 91  AGEGIMFHLED--RQERSLGLGPTHEEVITELASDLLRSYRQLPVTLYQIQSKFRDEIRP 148

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              GLMR R F   DA+ F   E        ++      +++  G   + V   +     
Sbjct: 149 RF-GLMRGREFIMKDAYSFHGDEGDLARMYEEMEKAYTRVFQRCGLTAVGVDADSGAIGG 207

Query: 435 VGSDALWDDA 444
             S      A
Sbjct: 208 AASQEFMVTA 217



 Score = 92.2 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 32/170 (18%), Positives = 63/170 (37%), Gaps = 10/170 (5%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I Q+         A       ++ H  M      G        + ++      
Sbjct: 429 RGIEVGHIFQLGRKYSLSMGAQITTKEGKQEHLWM-GCYGIGISRLAQAAVEQHHDDAGI 487

Query: 548 LWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W    +P Q IV          +   +EI N L +  + +  D R E    K ++  + 
Sbjct: 488 IWPLSIAPFQVIVVVANVQDEVQMALGEEIYNELLASGIDVLLDDRGERAGVKFKDADLI 547

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
            IP  ++ G + A+E ++ + +        +S  +AI  L  E++P + +
Sbjct: 548 GIPWRVVVG-RAAAEGNVELVKRSERDANVLSRAEAISSLL-EAIPTELR 595


>gi|311068179|ref|YP_003973102.1| prolyl-tRNA synthetase [Bacillus atrophaeus 1942]
 gi|310868696|gb|ADP32171.1| prolyl-tRNA synthetase [Bacillus atrophaeus 1942]
          Length = 564

 Score =  128 bits (321), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 46/232 (19%), Positives = 96/232 (41%), Gaps = 11/232 (4%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           + H+ L R      I ++ SGV  +    +K+ + + + +R +++  +  E+  P +   
Sbjct: 21  KSHQLLLRAG---FIRQNTSGVYSYMPLAYKVIKNIQTIVREELEKINAVEMLMPALQQA 77

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             WQ+SG W +Y   +  +K      +  R FAL   +     ++    +KSY+ LP+ L
Sbjct: 78  ETWQESGRWYTYGPELMRLKD-----RHGREFALGATHEEVVTSLVRDEVKSYKRLPLTL 132

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDFGFE 421
            +  S +R+E      GL+R R F   DA+ F   E+  +E  + ++    +I+      
Sbjct: 133 YQIQSKFRDEKRPRF-GLLRGREFIMKDAYSFHASEESLDETYENMYGAYTNIFARCELN 191

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
              V   +       +      +E     +  + +++    I    ++   A
Sbjct: 192 VRPVIADSGAMGGKDTHEFMALSEIGEDTIAYSDESTYAANIEMAEVINRDA 243



 Score = 76.0 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 56/153 (36%), Gaps = 8/153 (5%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI- 556
           +        NA Y++ +  +  P+++     G       I  ++      +W   +    
Sbjct: 414 LGTRYSEAMNATYLDENG-RSQPMLMGCYGIGISRTLSAIAEQHHDEKGLIWPKSVAPYD 472

Query: 557 -----VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
                +     +  E A+++    K+    +  D R E    K  +  +  +PI I  G 
Sbjct: 473 LHILALNMKNDAQKELAEKLYETFKTEGYDVLFDDRAERAGVKFADSDLIGLPIRITVGK 532

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           + A E  + ++   +  + +VS+ +    + K+
Sbjct: 533 R-ADEGIVEVKIRKTGESSEVSIEELSDFINKQ 564


>gi|325475063|gb|EGC78249.1| prolyl-tRNA synthetase [Treponema denticola F0402]
          Length = 595

 Score =  128 bits (321), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 52/216 (24%), Positives = 89/216 (41%), Gaps = 11/216 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           TQ  +        E+    H+ L R   + ++A   +G+  +   G K F+ +   +R +
Sbjct: 4   TQMYMPTLREIPNEAVVESHKLLLRAGMIRNLA---NGLFAYLPLGLKAFRKVEKIIREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E   P ++   +WQ+SG WDS    +  +K   +     +   + P       
Sbjct: 61  MDAIGCLEFKPPVIVPGEIWQESGRWDSMGPELLRIKNRLN-----QELVVSPTAEEAFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           A+  + L SY+  P+   +  + YR+E     +GLMR R FT  DA+ F T ++  +E  
Sbjct: 116 ALLKNELSSYKNYPLLTYQINTKYRDEIRPR-YGLMRTREFTMKDAYSFHTNDKSLDEAY 174

Query: 406 -KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
                  I I+K  G   I VK  +      GS   
Sbjct: 175 LSFEKAYIKIFKRCGLTVIGVKADSGAMGGSGSQEF 210



 Score = 75.2 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 57/159 (35%), Gaps = 13/159 (8%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL---SPIQ 554
           + +      N  Y++ + ++ HP M      G       I+ E+   +  +W    +P Q
Sbjct: 438 LGYKYTKAMNMTYLDENGKQQHPSM-GCYGIGLDRLTASIVEEHHDEDGIIWPMSIAPFQ 496

Query: 555 AIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
             +  I        E A  +    K   +    D R E    K ++  +  IPI ++ G+
Sbjct: 497 VAIVPIKYEGEMQKE-ADRLYEECKKRGIEALLDDRKERTGVKFKDMDLIGIPIRLVVGE 555

Query: 612 KEASERSIGIRRFGSTTTQKV---SLLDAIPILTKESLP 647
           K      I  +   +  +  V    ++D +    KE L 
Sbjct: 556 KNLPN--IEFKLRKAVESSLVDKNKVVDLVEKTVKEELA 592


>gi|312623151|ref|YP_004024764.1| AAA atpase [Caldicellulosiruptor kronotskyensis 2002]
 gi|312203618|gb|ADQ46945.1| AAA ATPase [Caldicellulosiruptor kronotskyensis 2002]
          Length = 554

 Score =  128 bits (321), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 44/262 (16%), Positives = 97/262 (37%), Gaps = 9/262 (3%)

Query: 3   SDIKLTFPDGSIKN-FPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIE 60
           + +K+ F D ++     V                   VA  ++ ++ +L   + R+  ++
Sbjct: 6   NTVKVFFEDANVYEDVEVGTNLLSFVPRFESYFKSPIVAAKVDNEIKELKYVIHRDCKVK 65

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            I       + + R S   ++  A + ++ E  V +   +  G Y + +  +  +++++ 
Sbjct: 66  FIDMTQEDGMRIYRRSLIFVLIVATRMLFKET-VNVQHSLSKGLYCEIE-NRKLTAEDIN 123

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            I++KM+ I+ +D  F ++ +S + A +LFE K    K   +      + V +Y  G++ 
Sbjct: 124 LIKQKMKWIVDQDFQFRREKVSKDDAVKLFEEKGFYDKARTI-KFSENDYVYIYYCGDYV 182

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNT----QQELTQYLY 236
           D   G  V STG +K F  +    G                            E   +  
Sbjct: 183 DYFYGHLVPSTGYLKIFNLIQYHDGMVLLYPDKSDPFKLQEFVENKKLFAVYHEYKNWGK 242

Query: 237 FLEESEKRDHRKLAREMDLFHI 258
            L  S   +  ++     +   
Sbjct: 243 ILGVSSIGELNEVIASGKIREF 264


>gi|197120447|ref|YP_002132398.1| prolyl-tRNA synthetase [Anaeromyxobacter sp. K]
 gi|196170296|gb|ACG71269.1| prolyl-tRNA synthetase [Anaeromyxobacter sp. K]
          Length = 510

 Score =  128 bits (321), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 69/447 (15%), Positives = 146/447 (32%), Gaps = 75/447 (16%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
             E+    + ++ +  DL   +     ++     G+ +++ +   +    K   +     
Sbjct: 14  RAENFSEWYLEVIKAADLAESSTVRGCMVI-KPWGYALWEHVQRVLDGMFKATGHVNAYF 72

Query: 297 PQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDL---------RTFALKPMNCPGHVA 346
           P  +   L + ++ H + +      V       +D              ++P +      
Sbjct: 73  PLFIPLSLLEKEAAHVEGFAKECAVVTHHRLEARDGKLVPVGELEEPLVVRPTSETIIGE 132

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
            F   ++SYR+LP+ + ++ +V R E        +R   F   + H     E+   E + 
Sbjct: 133 SFARWVQSYRDLPLLINQWANVVRWEMR--TRMFLRTAEFLWQEGHTAHATER---EAID 187

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
               ++ IY  F                         AE  M   +   + ++ +R    
Sbjct: 188 ETMQMLRIYARF-------------------------AEEWMALPVVQGEKTASERFP-- 220

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
                GA      E +++D   +  Q GT   +  N        + + +    H      
Sbjct: 221 -----GAVRTYCIEAMMQDR--KALQAGTSHFLGQNFAKASGIQFQDENGTLTHA---WT 270

Query: 526 AVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSS------AVEYAQEIANLL 575
             +G   R IG MI    ++     P  L+P Q ++  +          + +  E+   L
Sbjct: 271 TSWGLSTRMIGAMIMTHGDDDGMVCPPRLAPQQVVIIPVIQKPEVREQVLAWCAELKREL 330

Query: 576 KS-----HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI--RRFGSTT 628
           ++       + +  D R+     K  E   K  PI +  G K+  + ++ +  R      
Sbjct: 331 EAQSYAGAPVRVHLDARDVQGAKKSWEWIKKGAPIRLEVGPKDIEKGAVFMGRRDRKPRE 390

Query: 629 TQKVS---LLDAIPILTKESLPPDCQK 652
            Q V    L+  +  L +E      Q+
Sbjct: 391 KQSVPRGELVAGVAALLQEIQDALLQR 417


>gi|85708652|ref|ZP_01039718.1| prolyl-tRNA synthetase [Erythrobacter sp. NAP1]
 gi|85690186|gb|EAQ30189.1| prolyl-tRNA synthetase [Erythrobacter sp. NAP1]
          Length = 514

 Score =  128 bits (321), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 59/386 (15%), Positives = 125/386 (32%), Gaps = 72/386 (18%)

Query: 270 RKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKC---- 323
             G+ I++ +   M  +IK         P  +    ++ ++ H D +   M  V      
Sbjct: 43  PWGYGIWERVQRLMDDRIKAAGIANAYFPLFIPLANFEREADHVDGFAKEMAVVTHHRLI 102

Query: 324 --------ADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
                    D   K      ++P +           ++S+R+LP+ L ++ +V R E   
Sbjct: 103 ADGKGGLIPDPEAKLEEPLVVRPTSETIIGDAMARWIQSWRDLPLMLNQWANVVRWEMR- 161

Query: 376 SLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
                +R   F   + H    T+E+   E  +   +  +  ++     ++       E+ 
Sbjct: 162 -TRMFLRTSEFLWQEGHTAHATREEAVEETHRALEMYRACVEEDLAMPVIAGEKPENERF 220

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
            G+D  W                                      E +++D  G+  Q G
Sbjct: 221 PGADETWS------------------------------------IEAMMQD--GKALQAG 242

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWL 550
           T        +  +A  +    ++    + H   +G+  R IG ++    ++    +P  +
Sbjct: 243 TSHYLGTSFA--SAAGIQYQDKEGTQQLCHTTSWGTSTRMIGGVVMTHGDDDGLRVPPRI 300

Query: 551 SPIQAIVTTI------TSSAVEYAQEIANLLKSHHL-----SIETDFRNETINYKIREHS 599
           +P Q I+  +          + Y +E+   L S         +  D        K     
Sbjct: 301 APHQIIILPMLREKPEDEVVLAYCEEVRAALASQWSMGEPVRVLLDKTPGKAAAKRWSWV 360

Query: 600 IKKIPIIIICGDKEASERSIGIRRFG 625
            K  P+I+  G ++  E  + + R  
Sbjct: 361 RKGAPVIVEVGPRDMDEGKVAVLRRD 386


>gi|87302633|ref|ZP_01085450.1| prolyl-tRNA synthetase [Synechococcus sp. WH 5701]
 gi|87282977|gb|EAQ74934.1| prolyl-tRNA synthetase [Synechococcus sp. WH 5701]
          Length = 610

 Score =  128 bits (321), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 60/275 (21%), Positives = 104/275 (37%), Gaps = 17/275 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E   H+ L R   +  +A   SGV  +    W++   + + +R+++      E   P 
Sbjct: 17  EAEIPSHKLLLRGGYMRRVA---SGVYAYLPLLWRVLSKISAIVRQEMDATGALETLLPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW++SG W  Y A    +    D  +  R+  L P +     A+    L+SYR+L
Sbjct: 74  LQPASLWERSGRWQGYTAGEGIMFHLVD--RQERSLGLGPTHEEVITALAADLLRSYRQL 131

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKD 417
           PV L +  + +R+E      GLMR R F   DA+ F   E        ++      I+  
Sbjct: 132 PVTLYQIQTKFRDEIRPRF-GLMRGREFIMKDAYSFHADEADLRLTYQRMDQAYRRIFSR 190

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDA---ENIMKGVLDTIKNSSQDR----INTGVLLG 470
            G   + V+  +       S      A   E+++    D    ++Q+R        V L 
Sbjct: 191 CGLRTVAVEADSGAIGGSASQEFMVTADAGEDLILSSADGRYAANQERACSLPEPAVPLV 250

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSR 505
             A      E    D    +  C     + +   +
Sbjct: 251 PAA--AEAVELHTPDQHSIEALCAAHGFEPSQTVK 283



 Score = 76.4 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/162 (15%), Positives = 56/162 (34%), Gaps = 9/162 (5%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I Q+         A + N       P+ +     G        + ++      
Sbjct: 436 RGIEVGHIFQLGRKYSQALEATFTNEQGLDE-PLWMGCYGIGVSRLAQAAVEQHHDQQGI 494

Query: 548 LWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            W    +P + IV   +      V   +++ + L+   L +  D R+E    K ++  + 
Sbjct: 495 CWPVAIAPFEVIVLVASAQDPVQVALGEQLHDELEQAGLEVLLDDRSERAGVKFKDADLI 554

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            IP  ++ G + A+   + +        + V+    + +L  
Sbjct: 555 GIPWRVVVG-RGAASAQVELVERAGGAKRDVAAGAVVALLQD 595


>gi|291277468|ref|YP_003517240.1| prolyl-tRNA synthetase [Helicobacter mustelae 12198]
 gi|290964662|emb|CBG40517.1| prolyl-tRNA synthetase [Helicobacter mustelae 12198]
          Length = 577

 Score =  128 bits (321), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 47/221 (21%), Positives = 87/221 (39%), Gaps = 11/221 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  +       +++  + H+ L R      I + GSG+  +   G K+ + +   +R 
Sbjct: 3   FSKYFIPTLKENPKDAVLKSHQYLVRGG---FIEQIGSGIYNFLPLGKKVLEKISQIIRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E+    V+   LW+QSG ++ Y   +   K      +    F L P      
Sbjct: 60  EMNEAGALEMAAGFVVPSELWKQSGRYEKYGKELLRFKD-----RRENEFVLGPTCEEAL 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
             +  + +KSY+ LP+   +    +R+E      GLMR R F   DA+ F    E +  E
Sbjct: 115 TNLAKNLIKSYKSLPLNFYQIHLKFRDEVRPRF-GLMRGREFIMKDAYSFHANFEDLDRE 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
              +H     I+   G +  +V   +      GS      A
Sbjct: 174 FENMHQAYCRIFTRLGLDFRVVDADSGAIGGSGSKEFMVLA 214



 Score = 75.2 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 69/214 (32%), Gaps = 21/214 (9%)

Query: 441 WDDAENIMKGVLDTI-KNSSQDRINTGVLLG--EGAFYGPKFEYILKDA---------IG 488
           W   +  ++   D I   + +D    GV L   EG  Y         D            
Sbjct: 358 WIIFDEELRDERDLICGANERDYHFVGVDLSTFEGLVYADLVNVQAGDVCTCCDGKLTHK 417

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           +  + G I  +         A +++ +  K    ++     G       I+ +       
Sbjct: 418 KGIEVGHIFKLGTKYSQAMQAVFLDQNG-KSQAFVMGCYGIGVSRLLPAILEQKSDALGC 476

Query: 548 LW---LSPIQAIVTTITSSA---VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W    +P + ++          VE++Q +   L    + +  D R+E   +K+++  + 
Sbjct: 477 VWSSTTAPFKVVIIPSNKKNPSEVEFSQRLYENLLQRGVDVLLDDRDERFGFKMKDFELI 536

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
                I+ G KE     + I        Q VS  
Sbjct: 537 GFEFAIVVG-KELEGGRVEIFEREGMQKQVVSAD 569


>gi|28572736|ref|NP_789516.1| prolyl-tRNA synthetase [Tropheryma whipplei TW08/27]
 gi|81839165|sp|Q83HI1|SYP_TROW8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|28410869|emb|CAD67254.1| prolyl-tRNA synthetase [Tropheryma whipplei TW08/27]
          Length = 601

 Score =  128 bits (321), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 56/282 (19%), Positives = 104/282 (36%), Gaps = 9/282 (3%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           T+     +  F E+    + R     +   +I + GSG+  W   G K+   + + +R +
Sbjct: 3   TKVSDFLFRTFREDPATTESRGYGFLLRAGYIRQTGSGIFSWMPLGLKVRHKIENIIRYE 62

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++  +  E+  P +    L++QSG W  Y  ++F +K      +    + L P +     
Sbjct: 63  MRQVNAIEVLFPALFSADLFKQSGRWSEYGDDIFRLKD-----RRQGDYLLAPTHEEAFT 117

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +      SYR+LP  + +    YR+E      GL+R R F+  DA+ F   E+   +  
Sbjct: 118 QMMKEICTSYRDLPRTVYQIQDKYRDELRPR-AGLLRSREFSMKDAYSFDLDEKGLRQSY 176

Query: 406 KIH-NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
           +        I+     + ++VK +        S+      E      + T   S+ +   
Sbjct: 177 EAQKRAYKKIFDRLEIDYVIVKANAGAMGGSVSEEFLHPTEMGDDTFVVTADGSAFNAEV 236

Query: 465 TGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF 506
              L G    Y    E    +  G       +    N   RF
Sbjct: 237 YVTLPGPAIDYSNAPEAEDCETPG-VISIPDLVNHMNSSGRF 277



 Score = 69.4 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 65/184 (35%), Gaps = 19/184 (10%)

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
           +  G+ + +GP     +K    R  + G + Q+     +      ++         M   
Sbjct: 416 IKTGDKSEWGP---VTVK----RGIEIGHLFQLGLKYSNALGLKVLDKDGYNKAVFMGSY 468

Query: 526 AVFGSIERFIGIMIE----NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLS 581
            +   + R   ++ E          P  L+P    V  ++S+      E+ + L    L 
Sbjct: 469 GI--GVSRLFALIAEKNCDERGLKWPAVLAPFDLHVVLLSSARA----ELIDSLTDCGLD 522

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           +  D R  +   K  +  +  +P II+ GDK   E  + +    +     + L + I  +
Sbjct: 523 VLVDDRRVSPGVKFTDAQLIGVPKIIVIGDKTRGED-VEVWDRANDQRTVLPLKEMIQGV 581

Query: 642 TKES 645
            + S
Sbjct: 582 IQRS 585


>gi|82947575|dbj|BAE52439.1| Prolyl-tRNA synthetase [Magnetospirillum magneticum AMB-1]
          Length = 471

 Score =  128 bits (321), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 73/411 (17%), Positives = 142/411 (34%), Gaps = 72/411 (17%)

Query: 270 RKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDT 327
             G+ I++ +   + R+IK+  +E    P  +     + ++ H + +   M  V      
Sbjct: 15  PWGYGIWEAIQRDLDRRIKETGHENCYFPLFIPLSFLEKEAAHVEGFAKEMAVVTHHRLV 74

Query: 328 IKDL---------RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLH 378
            +D              ++P +       F   ++SYR+LP+ + ++ +V R E      
Sbjct: 75  AEDGKLVPSGKLEEPLVVRPTSETIIGDAFARWIQSYRDLPMLVNQWANVVRWEMRP--R 132

Query: 379 GLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGS 437
             +R   F   + H    T E+  +E LK+  +   +                       
Sbjct: 133 IFLRTAEFLWQEGHTAHATAEEAMDETLKMLEVYRVM----------------------- 169

Query: 438 DALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ 497
                 AE ++   +   +  + +R         GA      E +++D  G+  Q GT  
Sbjct: 170 ------AEEVLAMPVIVGEKPAHERFP-------GADKTYSIEAMMQD--GKALQAGTSH 214

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPI 553
                 S+  A  +   + +      +   +G   R IG +I +   +    +P  ++P 
Sbjct: 215 FLGQHFSK--AQNIRYQTAQGGEEFCYTTSWGVSTRLIGGVIMSHADDNGLRVPPRIAPK 272

Query: 554 QAIVTTITSS------AVEYAQEIANLLKSH-----HLSIETDFRNETINYKIREHSIKK 602
           Q +   IT +        ++   I   L +       L +  D R      K  E   K 
Sbjct: 273 QIVFVPITRADGDEALIEDFLAPIVKDLSAQSFGGERLRVHVDRRPLAPPEKRWEWVKKG 332

Query: 603 IPIIIICGDKEASERSIG-IRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
            PII   G ++ +  S+  IRR G    Q     + +      ++  D QK
Sbjct: 333 APIICEVGPRDVAGGSVAMIRRDGELKGQITPKDELVSR--AAAILEDIQK 381


>gi|325685949|gb|EGD28012.1| proline--tRNA ligase [Lactobacillus delbrueckii subsp. lactis DSM
           20072]
          Length = 565

 Score =  128 bits (321), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 43/199 (21%), Positives = 81/199 (40%), Gaps = 11/199 (5%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQ 302
           + H+ + R   +  +    +GV  +   G+K+ +     +  ++      E+  P +L  
Sbjct: 21  KSHQVMLRGGYIRQV---TAGVYSYLPLGYKVLRKTEKIIEEEMANAGVVEMIMPHMLPA 77

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            +W++SG    Y   MF +K      +  R   L P +      V    LKSY+++P+ L
Sbjct: 78  SMWEESGRLPKYGPEMFRLKD-----RHGREMLLGPTHEETFTDVVAKSLKSYKQMPLHL 132

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFE 421
            +  + +R+E      GL+R R F   D + F  ++EQ+  +        + I+K  G E
Sbjct: 133 YQIQTKFRDENRPRF-GLLRGREFVMLDGYSFAASQEQLDKQFDNEKAAYLKIFKRTGVE 191

Query: 422 KIMVKLSTRPEKRVGSDAL 440
              V   +       S   
Sbjct: 192 VRPVIADSGTMGGKNSIEF 210



 Score = 71.0 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 29/152 (19%), Positives = 59/152 (38%), Gaps = 8/152 (5%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPL-WLSPIQA- 555
           +         A +++ +  K  PV++     G   R +  ++E +     + W   I   
Sbjct: 415 LGTYYTETMGAKFLDQNG-KSQPVIMGSYGIGVT-RLLSAVVEQYATENGVAWPKEIAPF 472

Query: 556 -IVTTITSSAVEYAQEIANLLKS--HHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
            I         E   ++A  L++      +  D RNE    K  +  +   PI I  G +
Sbjct: 473 GIHIIQMKMKDEIQSKLAEDLEAKFAKYDVLYDDRNERPGVKFNDADLVGAPIRITVG-R 531

Query: 613 EASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +A++  + ++R G    QK+++ D    +  E
Sbjct: 532 DAADGIVEVKRPGDDQAQKLAVADLEDFIANE 563


>gi|331268729|ref|YP_004395221.1| phosphoribulokinase family protein [Clostridium botulinum
           BKT015925]
 gi|329125279|gb|AEB75224.1| phosphoribulokinase family protein [Clostridium botulinum
           BKT015925]
          Length = 551

 Score =  128 bits (321), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 51/240 (21%), Positives = 105/240 (43%), Gaps = 5/240 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKA-VAVAINGKVCDLSDPV-REGSIE 60
           + I +T  D    +    +   ++ +    +L +   +    NGK+ +LS  +  +G  E
Sbjct: 2   NKINITLKDNKKISINKGSNLYEILK--KSNLEETTSILGWFNGKIYELSHEIQEDGYFE 59

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
           ++ P+   S+     +   I+ ++V+ ++P  +V I   +  G + +  KE P +  ++ 
Sbjct: 60  LVDPKRKISVLAYMRTLQFILIKSVRELYPGAKVRIEHSLSKGIFGEIHKETPLTITDIK 119

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            I++KM++II ++    K  +S EKA E+F+S     K+ + + +   + VTLY     +
Sbjct: 120 NIKEKMKDIIEKNIIIHKLLVSKEKAIEIFKSYDMDAKLRMFKHV-DNDKVTLYELDGLY 178

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           D   GP   STG+V+ F  +    G   RG +                 ++        +
Sbjct: 179 DYFYGPMAYSTGEVQLFDLMYYEPGFILRGPTIDNCNELPKFIDQKKLAKIFYESEQWAQ 238


>gi|283455556|ref|YP_003360120.1| proS Prolyl-tRNA synthetase [Bifidobacterium dentium Bd1]
 gi|283102190|gb|ADB09296.1| proS Prolyl-tRNA synthetase [Bifidobacterium dentium Bd1]
          Length = 605

 Score =  128 bits (321), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 49/292 (16%), Positives = 95/292 (32%), Gaps = 26/292 (8%)

Query: 247 RKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLW 305
           + L R   L    +   G+  W   G  +   + + +R ++   D +E++   +L +  +
Sbjct: 22  KLLQRACYLR---KAAPGIWTWLPLGLTVLNKIENIIREEMASIDAQEVHFSGLLPREPY 78

Query: 306 QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEF 365
           + +  W+ Y  N+F +K      +    + L P +      +      SY++LPV L + 
Sbjct: 79  EATHRWEEYGDNIFRLKD-----RHEADYLLAPTHEEMFTLLVKDLYSSYKDLPVTLYQI 133

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIM 424
            + YR+E      GL+R R F   DA+ F    E +    +        I+     + + 
Sbjct: 134 QTKYRDEFRPR-AGLIRGREFIMKDAYSFTLDKEGLVKAYMDERGAYERIFDRLDLKYVP 192

Query: 425 VKLSTRPEKRVGSDALWDDAE-------------NIMKGVLDTIKNSSQDRINTGVLLGE 471
           V     P     S+      E                   L T +  + D  +T      
Sbjct: 193 VHAMAGPMGGFESEEFLAPMEIGEDTFAQSPSGKAWNVEALTTPEPEAIDCTDTPAAEKR 252

Query: 472 GAFYGPKFEYILK--DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
                   + +++  +A          Q    L +   A           P 
Sbjct: 253 PTPDAATIDKMVEFANANHPRSDGRAWQASDILKNVVIAVMHPQDDNHDEPW 304



 Score = 84.8 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 64/164 (39%), Gaps = 12/164 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN- 545
           R  + G + Q+     +      ++ + +    V +    +G  + R +  + E    + 
Sbjct: 438 RGVEIGQVFQLGLKYSNALGLKVLDQNGKT---VPVWMGSYGIGVSRVMACIAETHHDDK 494

Query: 546 ---LPLWLSPIQAIVTTITSSAVEY--AQEIANLLKSHHLSIETDFRNE-TINYKIREHS 599
               P  ++P Q  V      A  +  A+++   L++  + +  D R + +   K ++  
Sbjct: 495 GLAWPAVIAPAQVHVVATGKDAAAFEAAEQLIAELEAKGIEVIFDDRKKVSPGVKFKDAE 554

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  +P+I + G    +  +I +R       + V + DA  ++  
Sbjct: 555 LIGVPLIAVAGRDTVNNGTIEVRDRNGENAEAVPVADAAQVIAD 598


>gi|171741061|ref|ZP_02916868.1| hypothetical protein BIFDEN_00127 [Bifidobacterium dentium ATCC
           27678]
 gi|171276675|gb|EDT44336.1| hypothetical protein BIFDEN_00127 [Bifidobacterium dentium ATCC
           27678]
          Length = 611

 Score =  128 bits (321), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 49/292 (16%), Positives = 95/292 (32%), Gaps = 26/292 (8%)

Query: 247 RKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLW 305
           + L R   L    +   G+  W   G  +   + + +R ++   D +E++   +L +  +
Sbjct: 28  KLLQRACYLR---KAAPGIWTWLPLGLTVLNKIENIIREEMASIDAQEVHFSGLLPREPY 84

Query: 306 QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEF 365
           + +  W+ Y  N+F +K      +    + L P +      +      SY++LPV L + 
Sbjct: 85  EATHRWEEYGDNIFRLKD-----RHEADYLLAPTHEEMFTLLVKDLYSSYKDLPVTLYQI 139

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIM 424
            + YR+E      GL+R R F   DA+ F    E +    +        I+     + + 
Sbjct: 140 QTKYRDEFRPR-AGLIRGREFIMKDAYSFTLDKEGLVKAYMDERGAYERIFDRLDLKYVP 198

Query: 425 VKLSTRPEKRVGSDALWDDAE-------------NIMKGVLDTIKNSSQDRINTGVLLGE 471
           V     P     S+      E                   L T +  + D  +T      
Sbjct: 199 VHAMAGPMGGFESEEFLAPMEIGEDTFAQSPSGKAWNVEALTTPEPEAIDCTDTPAAEKR 258

Query: 472 GAFYGPKFEYILK--DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
                   + +++  +A          Q    L +   A           P 
Sbjct: 259 PTPDAATIDKMVEFANANHPRSDGRAWQASDILKNVVIAVMHPQDDNHDEPW 310



 Score = 84.8 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 64/164 (39%), Gaps = 12/164 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN- 545
           R  + G + Q+     +      ++ + +    V +    +G  + R +  + E    + 
Sbjct: 444 RGVEIGQVFQLGLKYSNALGLKVLDQNGKT---VPVWMGSYGIGVSRVMACIAETHHDDK 500

Query: 546 ---LPLWLSPIQAIVTTITSSAVEY--AQEIANLLKSHHLSIETDFRNE-TINYKIREHS 599
               P  ++P Q  V      A  +  A+++   L++  + +  D R + +   K ++  
Sbjct: 501 GLAWPAVIAPAQVHVVATGKDAAAFEAAEQLIAELEAKGIEVIFDDRKKVSPGVKFKDAE 560

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  +P+I + G    +  +I +R       + V + DA  ++  
Sbjct: 561 LIGVPLIAVAGRDTVNNGTIEVRDRNGENAEAVPVADAAQVIAD 604


>gi|170016989|ref|YP_001727908.1| prolyl-tRNA synthetase [Leuconostoc citreum KM20]
 gi|226701307|sp|B1MY62|SYP_LEUCK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|169803846|gb|ACA82464.1| Prolyl-tRNA synthetase [Leuconostoc citreum KM20]
          Length = 571

 Score =  127 bits (320), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 39/216 (18%), Positives = 86/216 (39%), Gaps = 11/216 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++E + H+ L +   +  ++    G   +     ++   +   +R +
Sbjct: 4   SKLLMPTLREVPADAEVKSHQLLLKAGFIRPVSA---GTFSYLPMAKRVLNKIEQIIREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +   D  E+  P++L   LWQ+SG + +Y  N++  K   D     R F L P +     
Sbjct: 61  MDRIDANEMLVPEILPAELWQKSGRYTTYGPNLYKFKNRQD-----RDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    +KSY++LP+ + +    +R+E      GL+R R F   DA+ F   +   +   
Sbjct: 116 QLMADDIKSYKKLPLVVYQIQPKFRDENRPRF-GLLRTREFIMKDAYSFSADQAGLDTAF 174

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           + + +   +++   G     +           S   
Sbjct: 175 RNMESAYTNVFDRIGLNYRAIVGDAGAMGGSDSKEF 210



 Score = 66.7 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/142 (16%), Positives = 51/142 (35%), Gaps = 10/142 (7%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPI 553
           +         A  ++ +  +   +M    +   + R +  ++E    +     P  ++P 
Sbjct: 416 LGTRYSKAMGAQVLDENGRQVDMIMGSYGI--GVSRLLSAIVEQKADDDGLVWPASVAPF 473

Query: 554 QAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
              +  +          A ++  LL    L +  D R E    K  +  +  +PI I  G
Sbjct: 474 DVHIVPVNTKDDEQAGVASQLEELLTKQGLEVLIDDRKERAGVKFADADLIGLPIRITVG 533

Query: 611 DKEASERSIGIRRFGSTTTQKV 632
            K ASE  + ++   S T  ++
Sbjct: 534 KK-ASEDVVEVKVRASNTNIEM 554


>gi|222528548|ref|YP_002572430.1| AAA ATPase [Caldicellulosiruptor bescii DSM 6725]
 gi|222455395|gb|ACM59657.1| AAA ATPase [Caldicellulosiruptor bescii DSM 6725]
          Length = 554

 Score =  127 bits (320), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 41/240 (17%), Positives = 91/240 (37%), Gaps = 5/240 (2%)

Query: 3   SDIKLTFPDGSIKN-FPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIE 60
           + +K+ F D ++     V                   VA  ++ ++ +L   + R+  ++
Sbjct: 6   NTVKVFFEDANVYEDVEVGTNLLSFVPRFESYFKSSIVAAKVDNEIKELKYVIHRDCKVK 65

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            I       + + R S   ++  A + ++ E  V +   +  G Y + +  +  +++++ 
Sbjct: 66  FIDMTQEDGMRIYRRSLIFVLIVATRMLFKET-VNVQHSLSKGLYCEIE-NRKLTAEDIN 123

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            I++KM+ I+ +D  F ++ +S + A +LFE K    K   +      + V +Y  G++ 
Sbjct: 124 LIKQKMKWIVDQDFQFRREKVSKDDAVKLFEEKGFYDKARTI-KFSENDYVYIYYCGDYV 182

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           D   G  V STG +K F  +    G                         +        +
Sbjct: 183 DYFYGHLVPSTGYLKIFDLIQYHDGMVLLYPDKSDPFKLQEFVENKKLFAVYHEYKNWGK 242


>gi|116514305|ref|YP_813211.1| prolyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC BAA-365]
 gi|122274963|sp|Q049U9|SYP_LACDB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|116093620|gb|ABJ58773.1| Prolyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC BAA-365]
 gi|325126002|gb|ADY85332.1| Prolyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           2038]
          Length = 565

 Score =  127 bits (320), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 48/254 (18%), Positives = 93/254 (36%), Gaps = 22/254 (8%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQ 302
           + H+ + R   +  +    +GV  +   G+K+ +     +  ++      E+  P +L  
Sbjct: 21  KSHQVMLRGGYIRQV---TAGVYSYLPLGYKVLRKTEKIIEEEMANAGVVEMIMPHMLPA 77

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            +W++SG    Y   MF +K      +  R   L P +      V    LKSY+++P++L
Sbjct: 78  SMWEESGRLPKYGPEMFRLKD-----RHGREMLLGPTHEETFTDVVAKSLKSYKQMPLQL 132

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK----EQMFNECLKIHNLIISI---- 414
            +  + +R+E      GL+R R F   D + F       ++ F++    +  I       
Sbjct: 133 YQIQTKFRDENRPRF-GLLRGREFVMLDGYSFAASQEQLDKQFDDEKAAYLKIFKRTGVE 191

Query: 415 ----YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
                 D G       +  +    VG D +  +A       L+   +    +     L  
Sbjct: 192 VRPVIADSGTMGGKNSIEFQAPAAVGEDTIATNASGTYAANLEMAVSVDTFKQEPEELKA 251

Query: 471 EGAFYGPKFEYILK 484
                 P  + I K
Sbjct: 252 MEKVATPGCDSIDK 265



 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 57/151 (37%), Gaps = 6/151 (3%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQA-- 555
           +         A +++ +  K  PV++     G       ++ ++   N   W   I    
Sbjct: 415 LGTYYTETMGAKFLDQNG-KSQPVIMGSYGIGVTRLLSAVVEQHATENGVAWPKEIAPFG 473

Query: 556 IVTTITSSAVEYAQEIANLLKS--HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
           I         E   ++A  L++      +  D RNE    K  +  +   PI I  G ++
Sbjct: 474 IHIIQMKMKDEIQSKLAEDLEAKFAKYDVLYDDRNERPGVKFNDADLVGAPIRITVG-RD 532

Query: 614 ASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           A++  + ++R G    QK+++ D    +  E
Sbjct: 533 AADGIVEVKRPGDDQAQKLAVADLEDFIANE 563


>gi|104774217|ref|YP_619197.1| prolyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC 11842]
 gi|122983932|sp|Q1G9P3|SYP_LACDA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|103423298|emb|CAI98139.1| Prolyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC 11842]
          Length = 565

 Score =  127 bits (320), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 48/254 (18%), Positives = 93/254 (36%), Gaps = 22/254 (8%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQ 302
           + H+ + R   +  +    +GV  +   G+K+ +     +  ++      E+  P +L  
Sbjct: 21  KSHQVMLRGGYIRQV---TAGVYSYLPLGYKVLRKTEKIIEEEMANAGVVEMIMPHMLPA 77

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            +W++SG    Y   MF +K      +  R   L P +      V    LKSY+++P++L
Sbjct: 78  SMWEESGRLPKYGPEMFRLKD-----RHGREMLLGPTHEETFTDVVAKSLKSYKQMPLQL 132

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK----EQMFNECLKIHNLIISI---- 414
            +  + +R+E      GL+R R F   D + F       ++ F++    +  I       
Sbjct: 133 YQIQTKFRDENRPRF-GLLRGREFVMLDGYSFAASQEQLDKQFDDEKAAYLKIFKRTGVE 191

Query: 415 ----YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
                 D G       +  +    VG D +  +A       L+   +    +     L  
Sbjct: 192 VRPVIADSGTMGGKNSIEFQAPAAVGEDTIATNASGTYAANLEMAVSVDTFKQEPEELKA 251

Query: 471 EGAFYGPKFEYILK 484
                 P  + I K
Sbjct: 252 MEKVATPGCDSIDK 265



 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 57/151 (37%), Gaps = 6/151 (3%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQA-- 555
           +         A +++ +  K  PV++     G       ++ ++   N   W   I    
Sbjct: 415 LGTYYTETMGAKFLDQNG-KSQPVIMGSYGIGVTRLLSAVVEQHATENGVAWPKEIAPFG 473

Query: 556 IVTTITSSAVEYAQEIANLLKS--HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
           I         E   ++A  L++      +  D RNE    K  +  +   PI I  G ++
Sbjct: 474 IHIIQMKMKDEIQSKLAEDLEAKFAKYDVLYDDRNERPGVKFNDADLVGAPIRITVG-RD 532

Query: 614 ASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           A++  + ++R G    QK+++ D    +  E
Sbjct: 533 AADGIVEVKRPGDDQAQKLAVADLEDFIANE 563


>gi|210623134|ref|ZP_03293600.1| hypothetical protein CLOHIR_01550 [Clostridium hiranonis DSM 13275]
 gi|210153811|gb|EEA84817.1| hypothetical protein CLOHIR_01550 [Clostridium hiranonis DSM 13275]
          Length = 580

 Score =  127 bits (320), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 47/222 (21%), Positives = 93/222 (41%), Gaps = 11/222 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  +        + E   H+ + R      I +  SG+      G K+ + + + ++ 
Sbjct: 19  FSKMFIPTKREIPTDVEIESHKLMIRSGM---IKKSASGIYNQLPLGLKVERKIENIIKE 75

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++   D+ E+    ++   LWQ+SG W    A MF ++      +  + F L P +    
Sbjct: 76  EVEDADFREMLCSALIPSELWQESGRWARRGAEMFRLED-----RTGKEFCLGPTHEEVF 130

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    + SY++LPV+L +  S YR+E      G +R + FT  DA+ F   E+  N+ 
Sbjct: 131 TDIVRQEVSSYKQLPVKLYQIQSKYRDEKKPRF-GAIRTKSFTMFDAYSFDKDEESLNKS 189

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
             ++      I+   G +  +V+  +  E    S      +E
Sbjct: 190 YEEMIAAFKRIFDRCGVKYSLVEAESGIEGAPSSIEFMVKSE 231



 Score = 77.1 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 34/175 (19%), Positives = 64/175 (36%), Gaps = 11/175 (6%)

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
            PK    LK   G +      +         NA Y +      + + +     G+ ER  
Sbjct: 407 CPKCGAPLKIRRGIEI-GHIFKAGQKFSENMNAMYRSEEETDEY-IHLGCYEIGT-ERLT 463

Query: 536 GIMIENF----KGNLPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRN 588
             +IE          PL ++P +  +  +       V  A+ I   LK   + +  D R+
Sbjct: 464 ATIIEQNFDADGIVWPLSVAPFEVEIIPVNLKNEDVVNTAERIYKELKLMGVDVLIDDRD 523

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
                K ++  +  IP+ I  G ++  E  + ++   S   + +S +DA  I+  
Sbjct: 524 ARPGTKFKDSDLIGIPVRITVG-RDLKEGLVEMKFRNSEERELISAVDAAEIVRD 577


>gi|325571083|ref|ZP_08146655.1| proline--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
 gi|325156168|gb|EGC68354.1| proline--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
          Length = 569

 Score =  127 bits (320), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 41/216 (18%), Positives = 84/216 (38%), Gaps = 11/216 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++E   H+ L R   +  +A    G+  +     ++ + +   +R +
Sbjct: 4   SKCLIPTLRETPSDAETLSHQLLVRAGYIRQVAA---GIYVYLPLAQRVLEKIKRVIREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           + + D  E+  P +L    W++SG    Y  +++ +     T ++ R   L P +     
Sbjct: 61  LAEIDAVEMAMPSLLPYEPWKESGRASLYGESLYRL-----TDRNEREIVLGPTHEEPFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +  + + SY+ LP+ L +  + YR+E      GL+R R F   D + F   E   ++  
Sbjct: 116 TLIKNEITSYKRLPLSLYQIQTKYRDEQRPRF-GLIRSREFIMQDGYSFHADEASLDQTY 174

Query: 406 KIHNLIIS-IYKDFGFEKIMVKLSTRPEKRVGSDAL 440
             + +    I K  G E   V           S   
Sbjct: 175 NRYEMAYHAILKRCGIEYRAVVGDNGLMGGRDSKEF 210



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 53/161 (32%), Gaps = 9/161 (5%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPL 548
           R  + G I       S      V   +    P+++     G   R +  ++E +     +
Sbjct: 404 RGIEVGHIFKLGTKYSEAQEATVVDENGDEQPIIMGCYGLGVS-RLLSTIVEQYGNEFGI 462

Query: 549 -WL---SPIQAIVTTITSS---AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            W    +P    +   +         ++E+  ++      +  D RNE    K  +  + 
Sbjct: 463 DWPQEIAPFDVHIIQTSIEDSYQNALSEEVEEMMNQVGYQVLVDDRNERAGVKFADADLI 522

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             PI +  G K      + I+   +  T +V   +    LT
Sbjct: 523 GCPIRLTIGKKAVE-GIVEIKIKHTGATVEVRKEEVASTLT 562


>gi|157127485|ref|XP_001655003.1| prolyl-tRNA synthetase [Aedes aegypti]
 gi|108872928|gb|EAT37153.1| prolyl-tRNA synthetase [Aedes aegypti]
          Length = 435

 Score =  127 bits (320), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 66/449 (14%), Positives = 150/449 (33%), Gaps = 39/449 (8%)

Query: 217 LSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIF 276
           + ++      +       +   ++   +  R +    +   + + G+G  +      +  
Sbjct: 1   MHKLSKIFQPSLIIPKNAIVKNQDITSKSQRLML---EQGLMRQAGNGTFYILPLLQRSV 57

Query: 277 QTLISYMRRKIK--DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           Q  I  +   ++     E++  P +    LW++SG  ++    + +      T +  +  
Sbjct: 58  QKAIDLVDHHMQHFAGAEKLTLPILTSADLWRKSGRLETAGGELMST-----TDRHGKRQ 112

Query: 335 ALKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
            L P +     A+       SYR+ P+RL +  + +R+E      GLMR + F   D + 
Sbjct: 113 ILGPTHEESITALLAAISPVSYRQFPLRLYQISTKFRDEMKPRF-GLMRAKEFLMKDLYT 171

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV--GSDALWDDAENIMKGV 451
           F   +    E  + + ++   Y+       +  +  R +  V  GS +      + +   
Sbjct: 172 F---DVGLAEARQTYEVVNEAYRRLFEAVGVPFVKVRGDTGVMGGSTSHEYHFPSEVGED 228

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
                +      N  +  GE A      E      IGR                  A   
Sbjct: 229 QLVCCSVCGMGCNQEMFDGEKA-----CERCNNSNIGRQAGIEVGHAFILEDKYSKALGA 283

Query: 512 NSHSEKCHPVMIHRAVFGS-IERFIGIMIE----NFKGNLPLWLSPIQAIVTT------- 559
              ++   P  +    +G  I R I   +E      +   P  L+P +  +         
Sbjct: 284 MFLNQNGKPEALQMGCYGIGITRLIAAGVEVLSSEKEIRWPRALAPFKVCLIPPKKGSKE 343

Query: 560 --ITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASE 616
             +    +   ++  + L S    +  D R + TI  ++ +      P++++ G K A E
Sbjct: 344 ESLVEPWLHRLEDEVSKLSSVGSEVVVDDRTSLTIGKRLLDAKKTGYPVVVVIGPKAADE 403

Query: 617 RS--IGIRRFGSTTTQKVSLLDAIPILTK 643
            +    +      T + +   + +  + +
Sbjct: 404 GAELFEVHNQTDETQKLLGFSETVKEIER 432


>gi|313124034|ref|YP_004034293.1| prolyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           ND02]
 gi|312280597|gb|ADQ61316.1| Prolyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           ND02]
          Length = 565

 Score =  127 bits (320), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 43/199 (21%), Positives = 81/199 (40%), Gaps = 11/199 (5%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQ 302
           + H+ + R   +  +    +GV  +   G+K+ +     +  ++      E+  P +L  
Sbjct: 21  KSHQVMLRGGYIRQV---TAGVYSYLPLGYKVLRKTEKIIEEEMANAGVVEMIMPHMLPS 77

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            +W++SG    Y   MF +K      +  R   L P +      V    LKSY+++P+ L
Sbjct: 78  SMWEESGRLPKYGPEMFRLKD-----RHGREMLLGPTHEETFTDVVAKSLKSYKQMPLHL 132

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFE 421
            +  + +R+E      GL+R R F   D + F  ++EQ+  +        + I+K  G E
Sbjct: 133 YQIQTKFRDENRPRF-GLLRGREFVMLDGYSFAASQEQLDKQFDNEKAAYLKIFKRTGVE 191

Query: 422 KIMVKLSTRPEKRVGSDAL 440
              V   +       S   
Sbjct: 192 VRPVIADSGTMGGKNSIEF 210



 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 57/151 (37%), Gaps = 6/151 (3%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQA-- 555
           +         A +++ +  K  PV++     G       ++ ++   N   W   I    
Sbjct: 415 LGTYYTETMGAKFLDQNG-KSQPVIMGSYGIGVTRLLSAVVEQHATENGVAWPKEIAPFG 473

Query: 556 IVTTITSSAVEYAQEIANLLKS--HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
           I         E   ++A  L++      +  D RNE    K  +  +   PI I  G ++
Sbjct: 474 IHIIQMKMKDEIQSKLAEDLEAKFAKYDVLYDDRNERPGVKFNDADLVGAPIRITVG-RD 532

Query: 614 ASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           A++  + ++R G    QK+++ D    +  E
Sbjct: 533 AADGIVEVKRPGDDQAQKLAVADLEDFIANE 563


>gi|306823404|ref|ZP_07456779.1| proline--tRNA ligase [Bifidobacterium dentium ATCC 27679]
 gi|309802595|ref|ZP_07696699.1| proline--tRNA ligase [Bifidobacterium dentium JCVIHMP022]
 gi|304553111|gb|EFM41023.1| proline--tRNA ligase [Bifidobacterium dentium ATCC 27679]
 gi|308220659|gb|EFO76967.1| proline--tRNA ligase [Bifidobacterium dentium JCVIHMP022]
          Length = 611

 Score =  127 bits (320), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 39/196 (19%), Positives = 76/196 (38%), Gaps = 11/196 (5%)

Query: 247 RKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLW 305
           + L R   L    +   G+  W   G  +   + + +R ++   D +E++   +L +  +
Sbjct: 28  KLLQRACYLR---KAAPGIWTWLPLGLTVLNKIENIIREEMASIDAQEVHFSGLLPREPY 84

Query: 306 QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEF 365
           + +  W+ Y  N+F +K      +    + L P +      +      SY++LPV L + 
Sbjct: 85  EATHRWEEYGDNIFRLKD-----RHEADYLLAPTHEEMFTLLVKDLYSSYKDLPVTLYQI 139

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIM 424
            + YR+E      GL+R R F   DA+ F    E +    +        I+     + + 
Sbjct: 140 QTKYRDEFRPR-AGLIRGREFIMKDAYSFTLDKEGLVKAYMDERGAYERIFDRLDLKYVP 198

Query: 425 VKLSTRPEKRVGSDAL 440
           V     P     S+  
Sbjct: 199 VHAMAGPMGGFESEEF 214



 Score = 84.8 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 64/164 (39%), Gaps = 12/164 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN- 545
           R  + G + Q+     +      ++ + +    V +    +G  + R +  + E    + 
Sbjct: 444 RGVEIGQVFQLGLKYSNALGLKVLDQNGKT---VPVWMGSYGIGVSRVMACIAETHHDDK 500

Query: 546 ---LPLWLSPIQAIVTTITSSAVEY--AQEIANLLKSHHLSIETDFRNE-TINYKIREHS 599
               P  ++P Q  V      A  +  A+++   L++  + +  D R + +   K ++  
Sbjct: 501 GLAWPAVIAPAQVHVVATGKDAAAFEAAEQLIAELEAKGIEVIFDDRKKVSPGVKFKDAE 560

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  +P+I + G    +  +I +R       + V + DA  ++  
Sbjct: 561 LIGVPLIAVAGRDTVNNGTIEVRDRNGENAEAVPVADAAQVIAD 604


>gi|300812560|ref|ZP_07092977.1| proline--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
 gi|300496433|gb|EFK31538.1| proline--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
          Length = 565

 Score =  127 bits (320), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 48/254 (18%), Positives = 92/254 (36%), Gaps = 22/254 (8%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQ 302
           + H+ + R   +  +    +GV  +   G+K+ +     +  ++      E+  P +L  
Sbjct: 21  KSHQVMLRGGYIRQV---TAGVYSYLPLGYKVLRKTEKIIEEEMANAGVVEMIMPHMLPA 77

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            +W++SG    Y   MF +K      +  R   L P +      V    LKSY+++P+ L
Sbjct: 78  SMWEESGRLPKYGPEMFRLKD-----RHGREMLLGPTHEETFTDVVAKSLKSYKQMPLHL 132

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK----EQMFNECLKIHNLIISI---- 414
            +  + +R+E      GL+R R F   D + F       ++ F++    +  I       
Sbjct: 133 YQIQTKFRDENRPRF-GLLRGREFVMLDGYSFAASQEQLDKQFDDEKAAYLKIFKRTGVE 191

Query: 415 ----YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
                 D G       +  +    VG D +  +A       L+   +    +     L  
Sbjct: 192 VRPVIADSGTMGGKNSIEFQAPAAVGEDTIATNASGTYAANLEMAVSVDTFKQEPEELKA 251

Query: 471 EGAFYGPKFEYILK 484
                 P  + I K
Sbjct: 252 MEKVATPGCDSIDK 265



 Score = 70.2 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 57/151 (37%), Gaps = 6/151 (3%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQA-- 555
           +         A +++ +  K  PV++     G       ++ ++   N   W   I    
Sbjct: 415 LGTYYTETMGAKFLDQNG-KSQPVIMGSYGIGVTRLLSAVVEQHATENGVAWPKEITPFG 473

Query: 556 IVTTITSSAVEYAQEIANLLKS--HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
           I         E   ++A  L++      +  D RNE    K  +  +   PI I  G ++
Sbjct: 474 IHIIQMKMKDEIQSKLAEDLEAKFAKYDVLYDDRNERPGVKFNDADLVGAPIRITVG-RD 532

Query: 614 ASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           A++  + ++R G    QK+++ D    +  E
Sbjct: 533 AADGIVEVKRPGDDQAQKLAVTDLEDFIASE 563


>gi|227529103|ref|ZP_03959152.1| prolyl-tRNA synthetase [Lactobacillus vaginalis ATCC 49540]
 gi|227350947|gb|EEJ41238.1| prolyl-tRNA synthetase [Lactobacillus vaginalis ATCC 49540]
          Length = 580

 Score =  127 bits (320), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 40/223 (17%), Positives = 96/223 (43%), Gaps = 11/223 (4%)

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR 284
             ++  +        ++E   H+ + R   ++ ++    GV  +    +++ + + + +R
Sbjct: 2   QQSKILIPTKKEAPSDAEALSHKMMVRAGYIYQVSA---GVWAYLPMAYRVIRKVENIIR 58

Query: 285 RKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPG 343
           ++++     E+  P +L   LW++SG ++SY  N+F +K   D     R F + P +   
Sbjct: 59  QEMEKAGAVEMMMPALLPADLWKESGRYESYGDNLFKLKDRRD-----RDFIMGPTHEET 113

Query: 344 HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE 403
              V    +KSY++LP+ + +    +R+E     +G++R + F   D + F   +   ++
Sbjct: 114 FTEVIRDSIKSYKKLPLVVYQLQDKFRDEDRPR-YGILRGKEFEMLDGYSFSADQAGLDQ 172

Query: 404 CLKIH-NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
              +      +I+   G +  ++   +       S      AE
Sbjct: 173 AYDLQARAYRNIFDRIGLDYKVILADSGTMGGKNSQEFSAPAE 215



 Score = 77.5 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 69/183 (37%), Gaps = 15/183 (8%)

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
           V  GE A  G   ++     IG  ++ GT     +   +  A  ++++      +M    
Sbjct: 391 VKEGEIAPDGHPIKFTPGIEIGHIFKLGT-----HYSKKLGAQVLDNNGRLVDVIMGSYG 445

Query: 527 VFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTITS---SAVEYAQEIANLLKSHH 579
           +   + R +  + E    +     P  ++P    V  + +     +E A E+   L+   
Sbjct: 446 I--GVSRLLSAVAEQTADDNGLVWPDSIAPFDVHVIPVNAKKADQMEMANELTVALEKAG 503

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
             +  D R E    K  +  +  IPI I  G K AS+  + ++   +  T +V   + + 
Sbjct: 504 YDVLVDDRKERAGVKFADSDLIGIPIRITVGKK-ASDGIVEVKIRKTGETVEVKTEEVVN 562

Query: 640 ILT 642
            + 
Sbjct: 563 TVA 565


>gi|312116222|ref|YP_004013818.1| prolyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100]
 gi|311221351|gb|ADP72719.1| prolyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100]
          Length = 514

 Score =  127 bits (320), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 71/443 (16%), Positives = 153/443 (34%), Gaps = 90/443 (20%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
            E++    ++ + R+ DL   +     +I     G+ I++ +   +  +IK+  +E    
Sbjct: 10  REQNFPEWYQAVVRDADLAENSPVRGCMII-KPWGYGIWERVQKGLDARIKETGHENCYF 68

Query: 297 PQVLDQHLW-QQSGHWDSYRANMFAVKC-----------ADDTIKDLRTFALKPMNCPGH 344
           P  +      +++ H + +   M  V              D   +      ++P +    
Sbjct: 69  PIFIPMSFLAKEAEHVEGFAKEMAVVTHHRLKNIDGKLVPDPEAELQEPLIVRPTSETII 128

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
              F   +KSYR+LP+ + ++ +V R E        +R   F   + H   T      + 
Sbjct: 129 GDAFQRWVKSYRDLPILINQWANVVRWEMR--TRMFLRTTEFLWQEGH---TAHADKTDA 183

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
           +     ++ +Y+ F                         AE+++   +   +    +R  
Sbjct: 184 MAETLRMLEVYRSF-------------------------AEDVLAMPVVAGEKPENERFP 218

Query: 465 TGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF-NAFYVNSHSEKCHPVMI 523
                  GA      E +++D  G+  Q GT      L + F  A  +   +E     + 
Sbjct: 219 -------GADNTYSIEAMMQD--GKALQAGTSHY---LGTHFAEAQNIRFQNEAGELALC 266

Query: 524 HRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI------TSSAVEYAQEIAN 573
           H   +G   R IG +I    ++    LP  ++P Q ++  +       ++ VE+   +A 
Sbjct: 267 HTTSWGVSTRLIGGVIMTHGDDDGLRLPPAIAPKQIVIVPMLRDKPEDAAVVEFCTSLAA 326

Query: 574 LLKSH-----HLSIETDFRNETINYKIREHSIKK------IPIIIICGDKEASERSIGIR 622
            L +       +    D R      KI+    +        P+I+  G ++AS  ++   
Sbjct: 327 ELNAKAAFGEPIRAHIDNR------KIKSADKRWDWVRRGAPLILEIGPRDASGGNVTFT 380

Query: 623 RFG------STTTQKVSLLDAIP 639
           R           +  +   + + 
Sbjct: 381 RRDALRDGPKVKSHSLPRAEFVA 403


>gi|227544954|ref|ZP_03975003.1| prolyl-tRNA synthetase [Lactobacillus reuteri CF48-3A]
 gi|300910015|ref|ZP_07127475.1| proline--tRNA ligase [Lactobacillus reuteri SD2112]
 gi|227185065|gb|EEI65136.1| prolyl-tRNA synthetase [Lactobacillus reuteri CF48-3A]
 gi|300892663|gb|EFK86023.1| proline--tRNA ligase [Lactobacillus reuteri SD2112]
          Length = 577

 Score =  127 bits (320), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 53/307 (17%), Positives = 115/307 (37%), Gaps = 24/307 (7%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++E   H+ + R   ++ ++    GV  +    +++ + + + +R +
Sbjct: 4   SKVLIPTKKEAPSDAEALSHKMMIRAGYIYQVSA---GVWSYLPLAYRVIRKVENIIRDE 60

Query: 287 IK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P +L   LW++SG ++SY  N+F +K   D     R F L P +     
Sbjct: 61  MDKAGAVEMLMPGLLPADLWKESGRYESYGDNLFKLKDRRD-----RDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            V    +KSY++LP+ + +    +R+E     +G++R + F   D + F    E +    
Sbjct: 116 EVLRDSIKSYKKLPLVVYQLQDKFRDEDRPR-YGILRGKEFEMLDGYSFSADQEGLDEAY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
                   +I+   G    ++   +       S      AE     V + I   +     
Sbjct: 175 NNQAKAYRNIFDRIGLNYKVILADSGTMGGKNSQEFSAPAE-----VGEDIIAYTDGDYA 229

Query: 465 TGVLLGEGAFYGPK-------FEYILKDAIGR-DWQCGTIQVDFNLPSRFNAFYVNSHSE 516
             +   E  F G +        E          D    ++ +D N   +   +      +
Sbjct: 230 ANIEKAESKFTGVQQTAAPAPIEKKATPGAHTVDEAAESLDLDPNQVIKSMLYIAKMSED 289

Query: 517 KCHPVMI 523
           +  PV++
Sbjct: 290 EYQPVLV 296



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 66/182 (36%), Gaps = 15/182 (8%)

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
           V  GE A  G   ++     IG  ++ GT     +  S+  A  ++S+  +   V++   
Sbjct: 391 VKEGEIAPDGKPLKFTPGIEIGHIFKLGT-----HYSSKLGAQVLDSNG-RLTDVIMGSY 444

Query: 527 VFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHH 579
             G   R +  + E          P  ++P    V  +       +  A +I   L    
Sbjct: 445 GIGVT-RLLSAVAEQNADENGLVWPNSIAPFDVHVIPVNAKKEDQMAMADKIDQQLTEAG 503

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
             +  D R E    K  +  +  IPI +  G K A +  + I+   +  T +V   + + 
Sbjct: 504 YEVLVDDRKERAGVKFADSDLIGIPIRVTVGKK-AQDGIVEIKIRKTGETVEVKQEELVN 562

Query: 640 IL 641
            +
Sbjct: 563 TV 564


>gi|116072890|ref|ZP_01470155.1| prolyl-tRNA synthetase [Synechococcus sp. BL107]
 gi|116064416|gb|EAU70177.1| prolyl-tRNA synthetase [Synechococcus sp. BL107]
          Length = 593

 Score =  127 bits (320), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 51/207 (24%), Positives = 85/207 (41%), Gaps = 8/207 (3%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
           E+E   H+ L R   +  +   GSG+  +    WK+ Q + + +R ++     +E   PQ
Sbjct: 17  EAEIASHQLLLRGGYIRRV---GSGIYGYLPLMWKVIQRITAIVRDELNKAGAQETLLPQ 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LWQ+SG W  Y A    +   +D  +  R   L P +     ++    L+SY++L
Sbjct: 74  LHPAELWQRSGRWQGYTAGEGIMFHLED--RQGRELGLGPTHEEVVTSLAGDLLQSYKQL 131

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKD 417
           PV L +  + +R+E      GLMR R F   DA+ F   E         +      I++ 
Sbjct: 132 PVNLYQVQTKFRDEIRPRF-GLMRGREFIMKDAYSFHASEADLRNTYLDMDQAYRRIFER 190

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDA 444
            G   + V   +       S      A
Sbjct: 191 CGLAAVPVDADSGAIGGAASQEFMVTA 217



 Score = 78.7 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 33/180 (18%), Positives = 65/180 (36%), Gaps = 15/180 (8%)

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG 529
           GE   + P  E  L +  G +      Q+        ++ + N   +  H        +G
Sbjct: 415 GEACVHNP--EAHLIEKRGIEV-GHIFQLGRKYSEAMDSRFTNEAGKTEH---FWMGCYG 468

Query: 530 S-IERFIGIMIENFKGN----LPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLS 581
             I R     +E    +     P  ++P +AIV        +  E  + +   L +  + 
Sbjct: 469 IGISRLAQAAVEQHHDDAGICWPPAIAPYEAIVVVANMQDQTQAELGESLYEQLLAAGVD 528

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
              D R E    K ++  +  IP  ++ G ++A +  + +    +   QK+   DA+  L
Sbjct: 529 ALFDDRKERAGVKFKDADLIGIPWRVVVG-RDAGDGVVELVERANRGVQKLPHADALNEL 587


>gi|260592035|ref|ZP_05857493.1| phosphoribulokinase family protein [Prevotella veroralis F0319]
 gi|260536319|gb|EEX18936.1| phosphoribulokinase family protein [Prevotella veroralis F0319]
          Length = 555

 Score =  127 bits (319), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 94/242 (38%), Gaps = 3/242 (1%)

Query: 1   MPSDIKLTFPDGSI-KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-S 58
           M   + +   +       P+ +T SD+ + I+  +    V+  +N KV  L   V     
Sbjct: 3   MTQLLHIRCKNNKKSLKVPMGSTLSDIFKEINLQMPYGPVSAKVNNKVEGLHYRVYHNKD 62

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           +E +       +     S   ++ +AV  ++   +V I   + +G+Y +       ++++
Sbjct: 63  VEYLDLHTQSGIRTYTRSLFLVLCKAVHDLYSRSEVIIDIPVSNGYYCNLKLGHAITAED 122

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           + +I  +MQEI+    P  +   + E+A ++F    +  K ++L+S         Y   +
Sbjct: 123 VNRIRTRMQEIVNAHLPIQRFETTTEEAIDMFSKLGDEQKAKLLKS-SGTLYTVYYVLDD 181

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D   G  + +T Q+  F       G   R  S +           +   E+ +  +  
Sbjct: 182 YKDYYYGSMLTNTSQLYLFGLEPYFDGVLLRIPSVQDPSQLGALIRQDKMFEVFKEHHRW 241

Query: 239 EE 240
           + 
Sbjct: 242 QS 243


>gi|148543925|ref|YP_001271295.1| prolyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
 gi|184153321|ref|YP_001841662.1| prolyl-tRNA synthase [Lactobacillus reuteri JCM 1112]
 gi|227364834|ref|ZP_03848881.1| prolyl-tRNA synthetase [Lactobacillus reuteri MM2-3]
 gi|325682540|ref|ZP_08162057.1| proline--tRNA ligase [Lactobacillus reuteri MM4-1A]
 gi|166980132|sp|A5VJD4|SYP_LACRD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226701303|sp|B2G6V0|SYP_LACRJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|148530959|gb|ABQ82958.1| prolyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
 gi|183224665|dbj|BAG25182.1| prolyl-tRNA synthase [Lactobacillus reuteri JCM 1112]
 gi|227070097|gb|EEI08473.1| prolyl-tRNA synthetase [Lactobacillus reuteri MM2-3]
 gi|324978379|gb|EGC15329.1| proline--tRNA ligase [Lactobacillus reuteri MM4-1A]
          Length = 577

 Score =  127 bits (319), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 52/307 (16%), Positives = 116/307 (37%), Gaps = 24/307 (7%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++E   H+ + R   ++ ++    GV  +    +++ + + + +R +
Sbjct: 4   SKVLIPTKKEAPSDAEALSHKMMIRAGYIYQVSA---GVWSYLPLAYRVIRKVENIIRDE 60

Query: 287 IK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P +L   LW++SG ++SY  N+F +K   D     R F L P +     
Sbjct: 61  MDKAGAVEMLMPGLLPADLWKESGRYESYGDNLFKLKDRRD-----RDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            V    +KSY++LP+ + +    +R+E     +G++R + F   D + F    E +    
Sbjct: 116 EVLRDSIKSYKKLPLVVYQLQDKFRDEDRPR-YGILRGKEFEMLDGYSFSADQEGLDEAY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
                   +I+   G    ++   +       S      AE     V + I   +     
Sbjct: 175 NNQAKAYRNIFDRIGLNYKVILADSGTMGGKNSQEFSAPAE-----VGEDIIAYTDGDYA 229

Query: 465 TGVLLGEGAFYGPK-------FEYILKDAIGRDWQCG-TIQVDFNLPSRFNAFYVNSHSE 516
             +   E  F G +        E          ++   ++ +D N   +   +      +
Sbjct: 230 ANIEKAESKFTGVQQTAVPAPIEKKATPGAHTVYEAAESLDLDPNQVIKSMLYIAKMSED 289

Query: 517 KCHPVMI 523
           +  PV++
Sbjct: 290 EYQPVLV 296



 Score = 75.6 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 66/182 (36%), Gaps = 15/182 (8%)

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
           V  GE A  G   ++     IG  ++ GT     +  S+  A  ++S+  +   V++   
Sbjct: 391 VKEGEIAPDGQPLKFTPGIEIGHIFKLGT-----HYSSKLGAQVLDSNG-RLTDVIMGSY 444

Query: 527 VFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHH 579
             G   R +  + E          P  ++P    V  +       +  A +I   L    
Sbjct: 445 GIGVT-RLLSAVAEQNADENGLVWPDSIAPFDVHVIPVNAKKEDQMAMADKIDQQLTEAG 503

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
             +  D R E    K  +  +  IPI +  G K A +  + I+   +  T +V   + + 
Sbjct: 504 YEVLVDDRKERAGVKFADSDLIGIPIRVTVGKK-AQDGIVEIKIRKTGETVEVKQEELVN 562

Query: 640 IL 641
            +
Sbjct: 563 TV 564


>gi|28493150|ref|NP_787311.1| prolyl-tRNA synthetase [Tropheryma whipplei str. Twist]
 gi|81839144|sp|Q83GR4|SYP_TROWT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|28476190|gb|AAO44280.1| prolyl-tRNA synthetase [Tropheryma whipplei str. Twist]
          Length = 613

 Score =  127 bits (319), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 64/319 (20%), Positives = 117/319 (36%), Gaps = 37/319 (11%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           T+     +  F E+    + R     +   +I + GSG+  W   G K+   + + +R +
Sbjct: 3   TKVSGFLFRTFREDPATTESRGYGFLLRAGYIRQTGSGIFSWMPLGLKVRHKIENIIRYE 62

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +   +  E+  P +    L++QSG W  Y  ++F +K      +    + L P +     
Sbjct: 63  MGQVNAIEVLFPALFSADLFKQSGRWSEYGDDIFRLKD-----RRQGDYLLAPTHEEAFT 117

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +      SYR+LP  + +    YR+E      GL+R R F+  DA+ F   E+   +  
Sbjct: 118 QMMKEICTSYRDLPRTVYQIQDKYRDELRPR-AGLLRSREFSMKDAYSFDLDEKGLRQSY 176

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
           +         K F   KI   +       +G              V +   + ++   +T
Sbjct: 177 EAQKRAYK--KIFDRLKIDYVIVKANAGAMGG------------SVSEEFLHPTEMGDDT 222

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI-H 524
            V+  +G+ +    E  +          G      N P    A    +      P ++ H
Sbjct: 223 FVVTADGSAFNA--EVYVTPP-------GPAIDYSNAPE---AEDCETPGVISIPDLVNH 270

Query: 525 RAVFGSIERFIGIMIENFK 543
               G   RFIG +IE+  
Sbjct: 271 MNSSG---RFIGRVIESSD 286



 Score = 68.7 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 64/182 (35%), Gaps = 19/182 (10%)

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
           +  G+ + +GP     +K    R  + G + Q+     +      ++         M   
Sbjct: 416 IKTGDKSEWGP---VTVK----RGIEIGHLFQLGLKYSNALGLKVLDKDGYNKAVFMGSY 468

Query: 526 AVFGSIERFIGIMIE----NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLS 581
            +   + R   ++ E          P  L+P    V  ++S+      E+ + L    L 
Sbjct: 469 GI--GVSRLFALIAEKNCDERGLKWPAVLAPFDLHVVLLSSARA----ELIDSLTDCGLD 522

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           +  D R  +   K  +  +  +P II+ GDK   E  + +    +     + L + I  +
Sbjct: 523 VLVDDRRVSPGVKFTDAQLIGVPKIIVIGDKTRGED-VEVWDRANDQRTVLPLKEMIQGV 581

Query: 642 TK 643
            +
Sbjct: 582 IQ 583


>gi|316978849|gb|EFV61767.1| putative proline--tRNA ligase [Trichinella spiralis]
          Length = 1494

 Score =  127 bits (319), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 64/425 (15%), Positives = 141/425 (33%), Gaps = 95/425 (22%)

Query: 260  EDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMF 319
             D SG        + I++ + +++ R+IK          ++D          + Y     
Sbjct: 1008 YDISGCYIIRPWAFAIWEAIQAWLDRQIK----------LMD--------VANCYFPMFV 1049

Query: 320  AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHG 379
            A        +     A++P +     + F+  ++S+R+LP+++ ++ ++ R E       
Sbjct: 1050 AWVTKSGQSEMSEPVAIRPTSETVMYSSFSKWIQSHRDLPLKINQWCNIVRWEFKHPT-P 1108

Query: 380  LMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD 438
             +R R F   + H     K+    E   I +L   +Y++     ++    T  EK  G+D
Sbjct: 1109 FLRSREFLWQEGHTAHANKDDAVKEVHDILDLYARVYEELLAVPVIKGRKTDKEKFAGAD 1168

Query: 439  ALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
                                                +    E  +  +        +  +
Sbjct: 1169 ------------------------------------FTTTIEAYIPTSGRGIQAATSHHL 1192

Query: 499  DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQ 554
              N    F+  Y +  ++K   V   +  +G   R IG+       N  L L P    +Q
Sbjct: 1193 GQNFSKMFDIVYEHPETQKKENVY--QNSWGLTTRSIGVFTMIHSDNQGLVLPPAVAKVQ 1250

Query: 555  A----------------------IVTT----------ITSSAVEYAQEIANLLKSHHLSI 582
                                   ++            +  +  +  Q +   L+S  +  
Sbjct: 1251 VCKKIIFLSSKMDSNVASVVVQVVIIPCGITSSLDKSVVKNIQDTCQLLNEELRSGEIRS 1310

Query: 583  ETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
              DFR+  +  +K     +K +P+ +  G ++ +E+ + + R    +   VS++     +
Sbjct: 1311 MCDFRDNYSPGWKFNHWELKGVPLRMELGPRDLNEKQVTLVRRDDGSKMTVSMIGFKADV 1370

Query: 642  TKESL 646
             K+ L
Sbjct: 1371 IKQLL 1375


>gi|328947267|ref|YP_004364604.1| Prolyl-tRNA synthetase [Treponema succinifaciens DSM 2489]
 gi|328447591|gb|AEB13307.1| Prolyl-tRNA synthetase [Treponema succinifaciens DSM 2489]
          Length = 603

 Score =  127 bits (319), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 43/222 (19%), Positives = 92/222 (41%), Gaps = 11/222 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q           E+    H+ + R      I + G+G+  +   G + ++ L   ++ 
Sbjct: 3   TSQIPFRTLRDSPSEAIISSHQLMMRA---DLIRKLGNGLYTYMPFGLRAYRKLEKIIKE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           +I+     E     ++   +W++SG W++    M   +      +  +   + P     +
Sbjct: 60  EIEASGAMEFKPTVIVPGDIWKESGRWETMGPQMLKAQN-----RQQQDMVVSPTAEEAY 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
            A+   GL SY++LP+   +  + YR+E     +G+MR R F   D +     ++  ++ 
Sbjct: 115 TAIMRQGLTSYKQLPINCYQINTKYRDEIRPR-YGVMRGREFNMMDGYTLNADDESLDQS 173

Query: 405 LKIH-NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
            + +    + I+K  G + I VK  T      GS+    ++E
Sbjct: 174 YQAYAKAYLRIFKRLGLDVITVKADTGAMGGSGSEEFMVESE 215



 Score = 79.4 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/176 (19%), Positives = 68/176 (38%), Gaps = 20/176 (11%)

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           FY  K      + +G  ++ G            N  Y++ + +   P M    +   ++R
Sbjct: 431 FYTTK-----GNELGHIFKLGK-----KYTESMNVTYLDKNGKSAVPTMGCYGI--GVDR 478

Query: 534 FIGIMIENFKGN----LPLWLSPIQAIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFR 587
            +  +IE F  +     P+  +P Q  +  I  + +  E A +I + L    + +  D R
Sbjct: 479 VLASIIEAFHDDRGIIWPMSTAPYQVAIVPIKYSGAMKEAADKIYDELLKASVEVLLDDR 538

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +E    K  +  +   P+ I  GDK      + I+   S   + V L +A    ++
Sbjct: 539 DERPGVKFNDMDLIGFPVRITVGDKNLPN--VEIKMRSSEQAELVPLENAAAKASE 592


>gi|322434762|ref|YP_004216974.1| prolyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9]
 gi|321162489|gb|ADW68194.1| prolyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9]
          Length = 612

 Score =  127 bits (319), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 42/216 (19%), Positives = 88/216 (40%), Gaps = 10/216 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  +        ++E   H+ L R   +  +   G+G+  +   G +    +++ +R+
Sbjct: 4   WSKLFIPTLREAPSDAEVASHKLLLRAGYVRQL---GAGIYSYLFLGQRSVNKIVAIIRQ 60

Query: 286 KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++    +E   P +  + +W++SG W     NMF +K      +      L   +     
Sbjct: 61  EMDTIGQEFLLPTIHPREVWEESGRWTGMGDNMFRLKD-----RKGAELCLGMTHEEVMT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    L+SY++LP    +  + +R+EP     GL+RVR F   D++ F   E   +   
Sbjct: 116 TIARSELRSYKQLPQIWYQIQTKFRDEPRPK-SGLLRVRQFIMKDSYSFDIDEAGLDLSY 174

Query: 406 KIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            +H+     I+   G E + V+  +       S   
Sbjct: 175 NLHDAAYRRIFDRCGLEYVAVEADSGAMGGSQSQEF 210



 Score = 79.1 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/168 (22%), Positives = 66/168 (39%), Gaps = 14/168 (8%)

Query: 487 IGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           +G+  + G I  + +       A  +N   ++  P+M    +   +ER +   IE     
Sbjct: 444 LGKAVEIGHIFKLGYKYSKSMGATVLNRDGKEVTPIMGSYGI--GVERILTAAIETSAAK 501

Query: 546 -------LPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
                  LP  ++P Q IVT       + VE  ++IA  L +  L +  D R+E    K 
Sbjct: 502 NGGEAYALPASIAPFQVIVTVTNIKEPALVEAGEKIAADLAAAGLDVLLDDRDERAGVKF 561

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           ++  +  +P  I  G K  SE  + +       T  + +  A+  L  
Sbjct: 562 KDADLTGVPYRIAVGKK-LSEGQVELLDRLQNQTLDIPVEAAVQTLRN 608


>gi|76613805|ref|XP_585755.2| PREDICTED: hypothetical protein [Bos taurus]
 gi|297473149|ref|XP_002686423.1| PREDICTED: hypothetical protein [Bos taurus]
 gi|296489106|gb|DAA31219.1| hypothetical protein BOS_3571 [Bos taurus]
          Length = 475

 Score =  127 bits (319), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 71/380 (18%), Positives = 133/380 (35%), Gaps = 53/380 (13%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I     G         +  + L+  + ++++    +++N P +    LW+ +  WDS   
Sbjct: 80  IHPASPGCYHLLPYTVRAMEKLVRVIDQEMQTIGGQKVNMPSLSPAELWRATKRWDSMGR 139

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL-KSYRELPVRLAEFGSVYRNEPSG 375
            +  ++      +  + + L P +     A+       SY++LP  L +    +R+EP  
Sbjct: 140 ELLRLRD-----RHGKDYCLGPTHEEAITALVASQKTLSYKQLPFLLYQVTRKFRDEPRP 194

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN------------LIISIYKDFGFEKI 423
              GL+R R F   D + F +  +       +                I +  D G    
Sbjct: 195 RF-GLLRGREFYMKDMYTFDSSPEAAQLTYSLVCDAYSSLFNRLGLRCIKVQADVGSIGG 253

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           MV    +    VG D L           ++T+ +S  +               P  +  L
Sbjct: 254 MVSHEFQLPVDVGEDRLVVCPSCHFSANMETLDSSRTN--------------CPACQGPL 299

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG-SIERFIGIMIENF 542
            +  G +    T  +     S FNA ++N H +   P +     +G  + R +   IE  
Sbjct: 300 TETKGIEV-GHTFYLGTKYSSIFNAQFINVHGK---PSLAEMGCYGLGVTRILAAAIEVL 355

Query: 543 KG----NLPLWLSPIQAIVTTITSSA-VEYAQEIANLLKSH--------HLSIETDFRNE 589
                   P  L+P Q  +      +  E A E+A  L +H           +  D R  
Sbjct: 356 STEDCVRWPGLLAPYQVCLIPPKKGSKEEAAAELAGDLYNHITEAVPQLQGEVLLDDRTH 415

Query: 590 -TINYKIREHSIKKIPIIII 608
            TI  ++++ +    P +II
Sbjct: 416 LTIGNRLKDANKLGYPFVII 435


>gi|312792775|ref|YP_004025698.1| aaa atpase [Caldicellulosiruptor kristjanssonii 177R1B]
 gi|312179915|gb|ADQ40085.1| AAA ATPase [Caldicellulosiruptor kristjanssonii 177R1B]
          Length = 554

 Score =  127 bits (319), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 43/241 (17%), Positives = 90/241 (37%), Gaps = 5/241 (2%)

Query: 2   PSDIKLTFPDGSIKN-FPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
            + +++ F D ++     V A                 VA  ++ ++ +L   + R+  +
Sbjct: 5   SNTVRIFFEDANVYEDVEVGANLLSFVPRFESYFKSPIVAAKVDNEIKELKYVISRDCKV 64

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           + I       + + R S   ++  A + ++ E  V +   +  G Y + +  +  S  ++
Sbjct: 65  KFIDMTQEDGMRIYRRSLIFVLIVATRMLFKEA-VNVQHSLSKGLYCEVE-NRKLSVQDI 122

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             I++KM+ I+ +D  F ++ +S ++A  LFE K    K   +      E+V +Y  G++
Sbjct: 123 KLIKQKMKWIVEQDFQFRREKVSKDEAVRLFEEKGFYDKARTI-KFSENEHVYIYYCGDY 181

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            D   G  V STG +K F  +    G                         +        
Sbjct: 182 VDYFYGHLVPSTGYLKIFDLIQYHDGMVLLYPDKSDPFKLQEFIENKKLFAVYHEYKNWG 241

Query: 240 E 240
            
Sbjct: 242 R 242


>gi|159903050|ref|YP_001550394.1| prolyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
 gi|226701318|sp|A9BED0|SYP_PROM4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|159888226|gb|ABX08440.1| Prolyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
          Length = 600

 Score =  127 bits (319), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 49/236 (20%), Positives = 92/236 (38%), Gaps = 8/236 (3%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +  I    SG+  +    W++ Q +   +R ++      E   PQ
Sbjct: 17  DAEIISHQLLIRGGFIKRI---TSGIYAYLPLMWRVIQKINCIIREELNAKGCLEALLPQ 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW+++G W+ Y A    +    D  +  R   L P +      +    L SY++L
Sbjct: 74  LHPSDLWKKTGRWEGYTAGEGIMFNLKD--RQGRELGLGPTHEEIITQIAGESLHSYKQL 131

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKD 417
           PV L +  + +R+E      GLMR R F   DA+ F   E+        + +    I++ 
Sbjct: 132 PVNLYQIQTKFRDEIRPRF-GLMRSREFIMKDAYSFHANEEDLKTSYASMDDAYRKIFER 190

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
            G + + V+  +       S      A+     +L +            + + + A
Sbjct: 191 CGIKTVAVEADSGAIGGAASQEFMVTADAGEDLILISKDGKYAANQEKAISIPKAA 246



 Score = 76.7 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 69/185 (37%), Gaps = 17/185 (9%)

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAV 527
            G+  FY  K +++++    R  + G I Q+     S   A   N  +EK          
Sbjct: 414 PGDQCFYDNK-QFLIE---KRGIEVGHIFQLGRKYSSSLEA---NFTNEKGSSEPFWMGC 466

Query: 528 FGS-IERFIGIMIENFKGN----LPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHH 579
           +G  + R     +E          PL +SP + I+              ++I   L+   
Sbjct: 467 YGIGVSRIAQAAVEQSHDQSGIIWPLSISPFEVIIVIANIKDEVQNRLGEDIYKQLRHKG 526

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
           + +  D R+E    K ++  +  IP  ++ G +++S   + + +    + + +     + 
Sbjct: 527 IDVLLDDRDERAGVKFKDADLIGIPWRVVVG-RDSSSGKVELLKRSDRSVKLIESEIVVK 585

Query: 640 ILTKE 644
            L  E
Sbjct: 586 ELIAE 590


>gi|325479231|gb|EGC82327.1| proline--tRNA ligase [Anaerococcus prevotii ACS-065-V-Col13]
          Length = 572

 Score =  127 bits (318), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 44/221 (19%), Positives = 92/221 (41%), Gaps = 11/221 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++E   H+ L R      I +  SGV  +   G K+   + + +R  
Sbjct: 4   SKYYMPTLREDPVDAETASHKYLTRGA---FIRKQASGVYSFLPLGKKVINKIEAIVRES 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +++ D  E++T  +  + +W+ SG W+++   MF ++      +  R + L P       
Sbjct: 61  MENHDSIEVSTSILQAKEIWETSGRWETFGPEMFKLED-----RHNRQYCLGPTAEEAFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +  + L SY++LP+ + +    +R+E      G+ R R F   DA+ F    E +    
Sbjct: 116 DLIKNELNSYKQLPLNIYQIVDKFRDEKRPRF-GINRSRDFLMKDAYSFDASYEGLELSY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
            K+ +  +  +   G E  +V+  +       S      +E
Sbjct: 175 QKMWDAYVEAFDKMGLEYKIVEGDSGSMGGRKSHEFIALSE 215



 Score = 84.4 bits (207), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 36/179 (20%), Positives = 65/179 (36%), Gaps = 12/179 (6%)

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
            G+ A+ G      LK A G +      Q+         A++++ +  K  P ++     
Sbjct: 389 EGDMAYDGSGI---LKAARGIEV-GNIFQLGTKYSESLEAYFLDENG-KQQPFIMGSYGI 443

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQA------IVTTITSSAVEYAQEIANLLKSHHLSI 582
           G       I+ +       LW + +        I+        E  +EI N LK   + +
Sbjct: 444 GISRSVSAIVEQYHDDKGILWPTSVAPFEAIVTIINPNKEDQKELGEEIYNKLKEERIDV 503

Query: 583 ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
             D R E    K  +  +  IP  I  G K+AS+  +          +K+++  AI  +
Sbjct: 504 LLDDRKERAGVKFNDRDLIGIPYRITVG-KDASDEIVEYSTRREMENEKITVDTAIEKI 561


>gi|257867713|ref|ZP_05647366.1| prolyl-tRNA synthetase [Enterococcus casseliflavus EC30]
 gi|257874040|ref|ZP_05653693.1| prolyl-tRNA synthetase [Enterococcus casseliflavus EC10]
 gi|257876619|ref|ZP_05656272.1| prolyl-tRNA synthetase [Enterococcus casseliflavus EC20]
 gi|257801796|gb|EEV30699.1| prolyl-tRNA synthetase [Enterococcus casseliflavus EC30]
 gi|257808204|gb|EEV37026.1| prolyl-tRNA synthetase [Enterococcus casseliflavus EC10]
 gi|257810785|gb|EEV39605.1| prolyl-tRNA synthetase [Enterococcus casseliflavus EC20]
          Length = 569

 Score =  127 bits (318), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 41/216 (18%), Positives = 83/216 (38%), Gaps = 11/216 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++E   H+ L R   +  +A    G+  +     ++ + +   +R +
Sbjct: 4   SKCLIPTLRETPSDAETLSHQLLVRAGYIRQVAA---GIYVYLPLAQRVLEKIKRVIREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +   D  E+  P +L    W++SG    Y  +++ +     T ++ R   L P +     
Sbjct: 61  LAQIDAVEMAMPSLLPYEPWKESGRASLYGESLYRL-----TDRNEREIVLGPTHEEPFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +  + + SY+ LP+ L +  + YR+E      GL+R R F   D + F   E   ++  
Sbjct: 116 TLIKNEITSYKRLPLSLYQIQTKYRDEQRPRF-GLIRSREFIMQDGYSFHADEASLDQTY 174

Query: 406 KIHNLIIS-IYKDFGFEKIMVKLSTRPEKRVGSDAL 440
             + +    I K  G E   V           S   
Sbjct: 175 NRYEMAYHAILKRCGIEYRAVVGDNGLMGGRDSKEF 210



 Score = 69.4 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 53/161 (32%), Gaps = 9/161 (5%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPL 548
           R  + G I       S      V   +    P+++     G   R +  ++E +     +
Sbjct: 404 RGIEVGHIFKLGTKYSEAQEATVVDENGDEQPIIMGCYGLGVS-RLLSTIVEQYGNEFGI 462

Query: 549 -WL---SPIQAIVTTITSS---AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            W    +P    +   +         ++E+  ++      +  D RNE    K  +  + 
Sbjct: 463 DWPQEIAPFDVHIIQTSIEDSYQNALSEEVEEMMNQVGYQVLVDDRNERAGVKFADADLI 522

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             PI +  G K      + I+   +  T +V   +    LT
Sbjct: 523 GCPIRLTIGKKAVE-GIVEIKIKHTGATVEVRKEEVASTLT 562


>gi|116333948|ref|YP_795475.1| prolyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
 gi|122269368|sp|Q03QS8|SYP_LACBA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|116099295|gb|ABJ64444.1| Prolyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
          Length = 569

 Score =  127 bits (318), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 44/220 (20%), Positives = 90/220 (40%), Gaps = 11/220 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  +        ++E   H+ + R   +  +    +G+  +    +++   + + +R +
Sbjct: 4   SQLLIPTLKEVPNDAEALSHQMMLRAGYIRQV---TAGMYAYLPLAFRVLTNIETIIREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++  +  E+  P VL   LWQ+SG +++Y  N+F  K   D+      F L P +     
Sbjct: 61  MEKINAVEMLMPAVLPASLWQESGRYETYGPNLFKFKNRHDS-----DFILAPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNEC 404
            +    +KSY+ LP+ + +    YR+E     +GL+R R F   DA+ F  + E +    
Sbjct: 116 MLVRDAIKSYKRLPLVMYQIQPKYRDEDRPR-YGLLRGREFIMKDAYSFSLSDEDLDRIY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
            ++     +I+   G     +           S      A
Sbjct: 175 NQMEQAYENIFDRIGLNYRAIVGDGGAMGGKDSKEFSAIA 214



 Score = 75.2 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/144 (20%), Positives = 51/144 (35%), Gaps = 10/144 (6%)

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL---SPIQAIVTTITSSAVE 566
            V     +  PV++     G       I  +       +W    +P    +  +     +
Sbjct: 425 TVLDEGGRQKPVVMGSYGIGVSRLLSAIAEQQADDKGLVWPRNIAPFDIHLVPVNLKKDD 484

Query: 567 YAQ---EIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRR 623
            AQ   E+   L +    I TD R E    K  +  +  IP+ I  G K A E  + I+ 
Sbjct: 485 QAQLTSELEEQLTAKGYRILTDDRKERPGVKFADSDLMGIPVRITIGKK-AGEGIVEIKI 543

Query: 624 FGSTTTQKV---SLLDAIPILTKE 644
             +  T +V    +   + IL K+
Sbjct: 544 RKTGETVEVIKDEVASTVEILFKD 567


>gi|298346548|ref|YP_003719235.1| proline--tRNA ligase [Mobiluncus curtisii ATCC 43063]
 gi|298236609|gb|ADI67741.1| proline--tRNA ligase [Mobiluncus curtisii ATCC 43063]
          Length = 623

 Score =  127 bits (318), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 37/203 (18%), Positives = 77/203 (37%), Gaps = 11/203 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E   H+ L R   +        G+  W   G K  + + + +R ++     +E+  P 
Sbjct: 19  EAEVDSHKLLVRAGYIR---RAAPGIYTWLPLGLKTLRRVENIVREEMDRIGGQELQFPM 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L    +  +  W+ +  ++F +K   +       + L P +             SY++L
Sbjct: 76  LLSSEPYVATNRWEEFGPSLFKLKDRKEG-----DYLLAPTHEEMFTLAVKDMYTSYKDL 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKD 417
           PV L +    YR+E      G++R R F   D++ F   +        +H      ++  
Sbjct: 131 PVILYQMKEKYRDEARPR-AGIIRGREFVMKDSYSFDLTDDGLEHSYALHRGAYRRVFTR 189

Query: 418 FGFEKIMVKLSTRPEKRVGSDAL 440
            G + ++    + P     S+  
Sbjct: 190 LGLDFVICHAMSGPMGGSASEEF 212



 Score = 83.7 bits (205), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 32/167 (19%), Positives = 63/167 (37%), Gaps = 11/167 (6%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPL 548
           R  + G I       ++     V   + K   V +     G       I  EN      +
Sbjct: 434 RGIEIGHIFALGRKYAKALGLSVLDENGKSQVVTMGSYGIGVSRLVAAIAEENHDDRGLM 493

Query: 549 WL---SPIQAIVTTITSSAVEYA--QEIANLLKSHHLSIETDFRNE-TINYKIREHSIKK 602
           W    +P Q  V         +A  +++A  L +  L +  D R + +   K ++  +  
Sbjct: 494 WPLNIAPFQVHVLATGKDPEIFATAEKLACQLDAAGLQVLYDDRPKASAGVKFKDAELLG 553

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVS----LLDAIPILTKES 645
           +P  ++ G K  +E  + IR+    TTQ+ +    + + +  + KE+
Sbjct: 554 MPYALVVG-KGLAEGKVEIRQRREGTTQETTPESCVEELLQAIEKET 599


>gi|44662851|gb|AAS47507.1| threonyl tRNA synthetase [Meiothermus ruber DSM 1279]
          Length = 149

 Score =  127 bits (318), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 61/149 (40%), Positives = 96/149 (64%), Gaps = 12/149 (8%)

Query: 72  VIRHSCAHIMAEAVQSIWPE-------VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           + RH+ AH++A+AV+ ++ E       V++AIGP+IE+GFYYD D  +P   ++L  IE+
Sbjct: 1   IFRHTLAHVLAQAVRELYTERGYRPEEVKLAIGPVIENGFYYDMDVPEPIRGEDLPIIEE 60

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE----WF 180
           KM+ I+A + P  +  L  E+A + +    + YK E+++ +P  E ++ Y QG+    + 
Sbjct: 61  KMRRIVAANLPLKRFVLPREEALKRYAGI-DPYKTELIQDLPESEELSFYAQGDDTYGFT 119

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWR 209
           DLCRGPHV STG++   FKL  +AGAYWR
Sbjct: 120 DLCRGPHVPSTGRIPPHFKLTGIAGAYWR 148


>gi|315655105|ref|ZP_07908007.1| proline--tRNA ligase [Mobiluncus curtisii ATCC 51333]
 gi|315490586|gb|EFU80209.1| proline--tRNA ligase [Mobiluncus curtisii ATCC 51333]
          Length = 623

 Score =  127 bits (318), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 37/203 (18%), Positives = 77/203 (37%), Gaps = 11/203 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E   H+ L R   +        G+  W   G K  + + + +R ++     +E+  P 
Sbjct: 19  EAEVDSHKLLVRAGYIR---RAAPGIYTWLPLGLKTLRRVENIVREEMDRIGGQELQFPM 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L    +  +  W+ +  ++F +K   +       + L P +             SY++L
Sbjct: 76  LLSSEPYVATNRWEEFGPSLFKLKDRKEG-----DYLLAPTHEEMFTLAVKDMYTSYKDL 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKD 417
           PV L +    YR+E      G++R R F   D++ F   +        +H      ++  
Sbjct: 131 PVILYQMKEKYRDEARPR-AGIIRGREFVMKDSYSFDLTDDGLEHSYALHRGAYRRVFTR 189

Query: 418 FGFEKIMVKLSTRPEKRVGSDAL 440
            G + ++    + P     S+  
Sbjct: 190 LGLDFVICHAMSGPMGGSASEEF 212



 Score = 82.9 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 32/167 (19%), Positives = 62/167 (37%), Gaps = 11/167 (6%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPL 548
           R  + G I       ++     V   + K   V +     G       I  EN      +
Sbjct: 434 RGIEIGHIFALGRKYAKALGLSVLDENGKSQVVTMGSYGIGVSRLVAAIAEENHDDKGLI 493

Query: 549 WL---SPIQAIVTTITSSAVEYA--QEIANLLKSHHLSIETDFRNE-TINYKIREHSIKK 602
           W    +P Q  V         +A  +++A  L +  L +  D R + +   K ++  +  
Sbjct: 494 WPLNIAPFQVHVLATGKDPEIFATAEKLACQLDAAGLQVLYDDRPKASAGVKFKDAELLG 553

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVS----LLDAIPILTKES 645
           +P  ++ G K  +E  I IR+    TTQ+ +    + + +  +  E+
Sbjct: 554 MPYALVVG-KGLAEGKIEIRQRREGTTQETTPESCVEELLQAIENEA 599


>gi|282856964|ref|ZP_06266215.1| proline--tRNA ligase [Pyramidobacter piscolens W5455]
 gi|282585125|gb|EFB90442.1| proline--tRNA ligase [Pyramidobacter piscolens W5455]
          Length = 478

 Score =  127 bits (318), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 68/432 (15%), Positives = 153/432 (35%), Gaps = 64/432 (14%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
            E+   + +  + +  +L   A     ++     G+ I++ L +   +  K+  +     
Sbjct: 8   REQDYSQWYLDIIKAAELADYAPVRGCMVV-RPTGYAIWEDLQAKFDKAFKETGHVNAYF 66

Query: 297 PQVLDQHL-WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P ++      +++ H + +      V  A     +     ++P +     A+++  ++S+
Sbjct: 67  PLLIPSSFLRKEAEHVEGFAPECAVVTHAGGEELE-EPLVIRPTSETVIGAMYSKWVQSW 125

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISI 414
           R+LP+ + ++ +V R E    L   +R   F   + H          E   K+ N+   I
Sbjct: 126 RDLPLLINQWANVLRWEKRPRL--FLRTSEFLWQEGHTAHATAAEAEEETVKMLNVYAKI 183

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
            K                                    + +     + + +      GA 
Sbjct: 184 MK------------------------------------EDMALPVVEGVKSEGERFPGAL 207

Query: 475 YGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
                E ++ D   +  Q GT   +  N    FN  + + +    +        +G   R
Sbjct: 208 DTYTCETMVSDT--KALQAGTSHFLGQNFAKAFNIQFQDQNGAMQYA---WTTSWGVSTR 262

Query: 534 FIGIMIENFKGN----LPLWLSPIQAIVTTITSSAVEYAQ------EIANLLKS-HHL-S 581
            IG +I     N    LP  ++P++A++  I+     +A+      E+AN L S     +
Sbjct: 263 MIGAIIMTHSDNDGLILPPRVAPVKAVILPISKDDATFAELDAKAHELANRLNSVLGPLT 322

Query: 582 IETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
           +  D +N      +   H  K +P+ +  G+K+A+  ++   R  +   + +        
Sbjct: 323 VRVDEQNHMRPADRFFYHLQKGVPLRLELGEKDAAAGTVRAVRRDTGVKEDLKWETLAER 382

Query: 641 LTKESLPPDCQK 652
           +   ++  D QK
Sbjct: 383 VA--AILEDIQK 392


>gi|189219701|ref|YP_001940342.1| Prolyl-tRNA synthetase [Methylacidiphilum infernorum V4]
 gi|189186559|gb|ACD83744.1| Prolyl-tRNA synthetase [Methylacidiphilum infernorum V4]
          Length = 512

 Score =  127 bits (318), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 71/446 (15%), Positives = 153/446 (34%), Gaps = 75/446 (16%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR-RKIKDDYEEIN 295
              E     ++++    DL   +E    +I     G+ +++ +   +  R  K  ++ + 
Sbjct: 15  RRSEDFPEWYQQVIAAADLAENSEVRGCMII-KPWGYALWERIQKELDLRIKKTGHKNVY 73

Query: 296 TPQVLDQH-LWQQSGHWDSYRANMFAVKCA----------DDTIKDLRTFALKPMNCPGH 344
            P  +    L +++ H + +      V                        ++P +    
Sbjct: 74  FPLFIPLEYLQKEAEHVEGFAKECAVVTHHRLEKGVDGKLHPASPLTEPLVIRPTSETII 133

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNE 403
            A F+  ++SYR+LP+ + ++ +V R E    L   +R   F   + H    + E+   E
Sbjct: 134 GAAFSRWIQSYRDLPLLINQWANVVRWEMRPRL--FLRTTEFLWQEGHTVHASPEEARQE 191

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            L I  L     + +    ++V      E+  G+D  +          L+ +    +   
Sbjct: 192 ALSIVKLYEEFMRGYLALPVIVGEKPESERFPGADNTYT---------LEAMVQDRK--- 239

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
              V +G   F                       +  N     N  +++   +       
Sbjct: 240 --AVQVGTSHF-----------------------LGQNFSKANNIRFLDKEGKMQ---FA 271

Query: 524 HRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTT------ITSSAVEYAQEIAN 573
             + +G   R IG +I     +    LP  ++P+Q ++          +  +++A +IA 
Sbjct: 272 WTSSWGVSTRLIGTLIMAHGDDNGLVLPPTVAPLQVVILPLVKKEEDKTKILDFAHQIAG 331

Query: 574 LLKSHHL-----SIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS-- 626
            ++          +E D R      K  E   K +P+ +  G +E S R + ++R     
Sbjct: 332 EIEKIDFAGEKLRVEVDKREMGGGVKSWEWIKKGVPLRVEIGPQEVSSRLLTVKRRDKEL 391

Query: 627 TTTQKVSLLDAIPILTKESLPPDCQK 652
              ++ +    +  L   +L  D QK
Sbjct: 392 KEREQFTFEGFLERLP--ALLADIQK 415


>gi|315657037|ref|ZP_07909922.1| proline--tRNA ligase [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
 gi|315492429|gb|EFU82035.1| proline--tRNA ligase [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
          Length = 623

 Score =  127 bits (318), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 37/203 (18%), Positives = 77/203 (37%), Gaps = 11/203 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E   H+ L R   +        G+  W   G K  + + + +R ++     +E+  P 
Sbjct: 19  EAEVDSHKLLVRAGYIR---RAAPGIYTWLPLGLKTLRRVENIVREEMDRIGGQELQFPM 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L    +  +  W+ +  ++F +K   +       + L P +             SY++L
Sbjct: 76  LLSSEPYVATNRWEEFGPSLFKLKDRKEG-----DYLLAPTHEEMFTLAVKDMYTSYKDL 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKD 417
           PV L +    YR+E      G++R R F   D++ F   +        +H      ++  
Sbjct: 131 PVILYQMKEKYRDEARPR-AGIIRGREFVMKDSYSFDLTDDGLEHSYALHRGAYRRVFTR 189

Query: 418 FGFEKIMVKLSTRPEKRVGSDAL 440
            G + ++    + P     S+  
Sbjct: 190 LGLDFVICHAMSGPMGGSASEEF 212



 Score = 84.4 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 32/167 (19%), Positives = 63/167 (37%), Gaps = 11/167 (6%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPL 548
           R  + G I       ++     V   + K   V +     G       I  EN      +
Sbjct: 434 RGIEIGHIFALGRKYAKALGLSVLDENGKSQVVTMGSYGIGVSRLVAAIAEENHDDRGLM 493

Query: 549 WL---SPIQAIVTTITSSAVEYA--QEIANLLKSHHLSIETDFRNE-TINYKIREHSIKK 602
           W    +P Q  V         +A  +++A  L +  L +  D R + +   K ++  +  
Sbjct: 494 WPLNIAPFQVHVLATGKDPEIFATAEKLACQLDAAGLQVLYDDRPKASAGVKFKDAELLG 553

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVS----LLDAIPILTKES 645
           +P  ++ G K  +E  + IR+    TTQ+ +    + + +  + KE+
Sbjct: 554 MPYALVVG-KGLAEGKVEIRQRREGTTQETTPESCVEELLQAIEKEA 599


>gi|28378679|ref|NP_785571.1| prolyl-tRNA synthetase [Lactobacillus plantarum WCFS1]
 gi|254556877|ref|YP_003063294.1| prolyl-tRNA synthetase [Lactobacillus plantarum JDM1]
 gi|300768192|ref|ZP_07078097.1| proline--tRNA ligase [Lactobacillus plantarum subsp. plantarum ATCC
           14917]
 gi|308180820|ref|YP_003924948.1| prolyl-tRNA synthetase [Lactobacillus plantarum subsp. plantarum
           ST-III]
 gi|81840975|sp|Q88VK1|SYP_LACPL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|28271515|emb|CAD64420.1| proline--tRNA ligase [Lactobacillus plantarum WCFS1]
 gi|254045804|gb|ACT62597.1| prolyl-tRNA synthetase [Lactobacillus plantarum JDM1]
 gi|300494256|gb|EFK29419.1| proline--tRNA ligase [Lactobacillus plantarum subsp. plantarum ATCC
           14917]
 gi|308046311|gb|ADN98854.1| prolyl-tRNA synthetase [Lactobacillus plantarum subsp. plantarum
           ST-III]
          Length = 569

 Score =  127 bits (318), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 41/195 (21%), Positives = 89/195 (45%), Gaps = 11/195 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++E   H+ + R   +  I+    G+  +    +++   +   +R++
Sbjct: 4   SKLLIPTLKEVPNDAEALSHQMMLRAGYIRQISA---GMYAYLPLAYRVLTNIEKIIRQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++  D  E+  P V+   LW+ +G +++Y   +F +K   D     R F L P +     
Sbjct: 61  MEKIDAAEMLVPAVIPAELWKATGRYETYGPELFKLKNRHD-----REFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           ++    +KSY+ LP+ L +  + YR+E     +GL+R R F   DA+ F   E   ++  
Sbjct: 116 SIVRDEIKSYKRLPLTLYQIQAKYRDEDRPR-YGLLRGREFIMKDAYSFHADEASLDDTF 174

Query: 406 K-IHNLIISIYKDFG 419
           + +     +I++  G
Sbjct: 175 QDMAQAYQNIFERVG 189



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 51/140 (36%), Gaps = 9/140 (6%)

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTITS--- 562
            V   + +  PV++     G   R +  + E          P  ++P    V  +     
Sbjct: 425 EVLDANGRNIPVIMGCYGIGVS-RLLSAIAEQRADENGLIWPKAIAPFDVHVIPVNPKKA 483

Query: 563 SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
             VE A ++   L++   ++  D R E    K  +  +  IP  I  G K ASE  + I+
Sbjct: 484 DQVEVADQVEAQLEAAGYNVLYDDRKERPGVKFADSDLMGIPARITIGKK-ASEGIVEIK 542

Query: 623 RFGSTTTQKVSLLDAIPILT 642
              +  T +V   +    L 
Sbjct: 543 LRQTGETLEVKQEEIANNLA 562


>gi|302670287|ref|YP_003830247.1| phosphoribulokinase/uridine kinase family protein [Butyrivibrio
           proteoclasticus B316]
 gi|302394760|gb|ADL33665.1| phosphoribulokinase/uridine kinase family protein [Butyrivibrio
           proteoclasticus B316]
          Length = 550

 Score =  127 bits (318), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 42/216 (19%), Positives = 95/216 (43%), Gaps = 7/216 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           S I +   +G  K +    T  ++A+        +  AV  NGK+ +L   V+ +G +  
Sbjct: 2   SIITI---NGIQKEYNKGVTYEEIAKEYQNQYNSRIAAVMFNGKIRELMKTVKKDGELSF 58

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVA--IGPIIEDGFYYDFDKEQPFSSDEL 119
           IT  D      +R +   ++ +AV+ +  + Q+   +   I +G+Y     +     +  
Sbjct: 59  ITFSDTIGYKTMRRTAIMLLIKAVRDVGGDKQLKTRVEFTIGNGYYCTIKGDIKVDDEFA 118

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A++  +++ +I+   P  K+    + A E+F+ +    KV +L+   + E + +Y+ G+ 
Sbjct: 119 AKVSDRIKFLISEKMPITKRVYPLDDAIEIFKKQGMDDKVALLKYRRSSE-INIYKLGDL 177

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRP 215
           +D   G  + +T  ++ F       G  +   + + 
Sbjct: 178 YDYFYGYMLPNTSYIENFQVECYHGGLLFTLPTKQE 213


>gi|304389734|ref|ZP_07371693.1| proline--tRNA ligase [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
 gi|304326910|gb|EFL94149.1| proline--tRNA ligase [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
          Length = 623

 Score =  127 bits (318), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 37/203 (18%), Positives = 77/203 (37%), Gaps = 11/203 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+E   H+ L R   +        G+  W   G K  + + + +R ++     +E+  P 
Sbjct: 19  EAEVDSHKLLVRAGYIR---RAAPGIYTWLPLGLKTLRRVENIVREEMDRIGGQELQFPM 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L    +  +  W+ +  ++F +K   +       + L P +             SY++L
Sbjct: 76  LLSSEPYVATNRWEEFGPSLFKLKDRKEG-----DYLLAPTHEEMFTLAVKDMYTSYKDL 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKD 417
           PV L +    YR+E      G++R R F   D++ F   +        +H      ++  
Sbjct: 131 PVILYQMKEKYRDEARPR-AGIIRGREFVMKDSYSFDLTDDGLEHSYALHRGAYRRVFTR 189

Query: 418 FGFEKIMVKLSTRPEKRVGSDAL 440
            G + ++    + P     S+  
Sbjct: 190 LGLDFVICHAMSGPMGGSASEEF 212



 Score = 84.4 bits (207), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 32/167 (19%), Positives = 63/167 (37%), Gaps = 11/167 (6%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPL 548
           R  + G I       ++     V   + K   V +     G       I  EN      +
Sbjct: 434 RGIEIGHIFALGRKYAKALGLSVLDENGKSQVVTMGSYGIGVSRLVAAIAEENHDDRGLM 493

Query: 549 WL---SPIQAIVTTITSSAVEYA--QEIANLLKSHHLSIETDFRNE-TINYKIREHSIKK 602
           W    +P Q  V         +A  +++A  L +  L +  D R + +   K ++  +  
Sbjct: 494 WPLNIAPFQVHVLATGKDPEIFATAEKLACQLDAAGLQVLYDDRPKASAGVKFKDAELLG 553

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVS----LLDAIPILTKES 645
           +P  ++ G K  +E  + IR+    TTQ+ +    + + +  + KE+
Sbjct: 554 MPYALVVG-KGLAEGKVEIRQRREGTTQETTPESCVEELLQAIEKEA 599


>gi|302335688|ref|YP_003800895.1| prolyl-tRNA synthetase [Olsenella uli DSM 7084]
 gi|301319528|gb|ADK68015.1| prolyl-tRNA synthetase [Olsenella uli DSM 7084]
          Length = 571

 Score =  127 bits (318), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 41/169 (24%), Positives = 79/169 (46%), Gaps = 10/169 (5%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
            ++E   HR L R   +    +  +G+  +    W+  + + + +R +++    +E+  P
Sbjct: 20  TDAELASHRLLLRAGMIR---KGAAGLYSYLPLAWRSIRKIEAIIRDEMETIGAQEMQVP 76

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + D  LW QSG W+ Y   +  +       +   ++AL P +      + ++ LKSY++
Sbjct: 77  ILTDADLWHQSGRWEVYGPELMRIDD-----RHGHSYALGPTHEESFTDLVHNELKSYKQ 131

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           LPV L +    +R+E      GLMR R F   DA+ F   ++   +C +
Sbjct: 132 LPVTLYQVQDKFRDERRPRF-GLMRGREFIMKDAYSFSATQESLRQCYE 179



 Score = 90.6 bits (223), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 25/178 (14%), Positives = 61/178 (34%), Gaps = 8/178 (4%)

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
            P     LK A G +      Q+         A + +    +  P ++     G      
Sbjct: 393 CPSCGAALKGARGIEIS-QVFQLGTKYSEAMGATFTDEDG-REKPFLMGCYGIGVSRTLA 450

Query: 536 GIMIENFKGNLPLWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNE 589
            ++ ++   +   W    +P +  V  +          A+ +A  L    + +  D R E
Sbjct: 451 AVVEQHHDEHGISWPVSVAPYEVEVIPLDVRDDLVWPVAERLATGLVDAGVEVVVDDRKE 510

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLP 647
               K  +  +   P  ++CG K   + ++ ++   +    ++ + +A+  + +  L 
Sbjct: 511 RPGVKFNDADLMGFPFQVVCGKKAIRDGNVELKLRATGERLELPIAEAVRAVAERVLA 568


>gi|34557905|ref|NP_907720.1| prolyl-tRNA synthetase [Wolinella succinogenes DSM 1740]
 gi|81832821|sp|Q7M8L1|SYP_WOLSU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|34483623|emb|CAE10620.1| PROLYL-TRNA SYNTHETASE [Wolinella succinogenes]
          Length = 570

 Score =  127 bits (318), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 43/210 (20%), Positives = 84/210 (40%), Gaps = 11/210 (5%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
           +++  + H  L R      I + GSG+  +   G ++   +   ++ ++ +   +E+   
Sbjct: 16  KDATLKSHEYLIRGGY---IQQVGSGIYNFLPLGKRVMDKIRQVVKEEMDQAGAQEVMLG 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            V    LW+ SG ++ Y   +   K   +       F L P +    V +    +KSY++
Sbjct: 73  FVTPAELWRNSGRFEKYGKELLRFKDRKEN-----DFVLGPTHEEMVVELAKGYVKSYKQ 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYK 416
           LP+ L +    +R+E      GLMR R F   D + F   E       ++       I+ 
Sbjct: 128 LPLHLYQIHLKFRDEIRPRF-GLMRGREFVMKDGYSFHANEADLIREFELMEATYKRIFT 186

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
             G +  +V+  +      GS      A++
Sbjct: 187 RLGLDFRVVEADSGAIGGSGSKEFMVLAQS 216



 Score = 82.5 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 61/166 (36%), Gaps = 11/166 (6%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFK 543
              +  + G I Q+         A ++N    K  P+++     G   R +  +IE +  
Sbjct: 407 TYKKGIEVGHIFQLGTRYSEPLGANFLNPEG-KSQPLVMGCYGIGVS-RLLAAVIEQHHD 464

Query: 544 GNLPLWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
               +W    +P   ++        S   YA+ + N L+   + +  D R+E    K+ +
Sbjct: 465 EKGCIWTKSTAPFNLVIVVSNVKDPSQKAYAENLYNALQKEGIEVLLDDRDERYGSKMAD 524

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             +  IP  +I G K   E  + +    +     V   D +  + +
Sbjct: 525 FELLGIPYAVIVG-KGLIEGQVELVNRANLQKGIVLADDILGRILE 569


>gi|302386566|ref|YP_003822388.1| AAA ATPase [Clostridium saccharolyticum WM1]
 gi|302197194|gb|ADL04765.1| AAA ATPase [Clostridium saccharolyticum WM1]
          Length = 553

 Score =  127 bits (318), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 46/248 (18%), Positives = 100/248 (40%), Gaps = 5/248 (2%)

Query: 11  DGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRS 69
           DG  K +P+  +  ++A+          + V++NGK+ +L   V+ + S+   T +D   
Sbjct: 7   DGVAKEYPIGTSYQEIAKEYQPRFENDILLVSVNGKLSELHKTVQFDSSLHFFTGKDQPG 66

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQ---VAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKM 126
           +     S   +M +A   +        V +   +  G+Y +   +   + + L++++ +M
Sbjct: 67  IQTYHRSAIFLMMKAFYDVAGAENIEKVTVDFSLGKGYYIEAHGKVELTEELLSRVKARM 126

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGP 186
           +E +++  P +K+ +  ++A ELF   +   K E L        V +Y  G + D   G 
Sbjct: 127 EEYVSQKLPIMKRNVHTDEAIELFHKHRMYDK-ERLFRYRRVSRVNIYSIGGFEDYYYGY 185

Query: 187 HVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDH 246
            V++TG +K F  +    G                  A   Q+        ++  E+ + 
Sbjct: 186 MVQNTGYIKYFDLIPYDDGFMLMLPQKENPKEVPVFEAEAKQKLFRVLKESIKWGERLNV 245

Query: 247 RKLAREMD 254
             +    +
Sbjct: 246 SHVGALNE 253


>gi|226324581|ref|ZP_03800099.1| hypothetical protein COPCOM_02365 [Coprococcus comes ATCC 27758]
 gi|225207029|gb|EEG89383.1| hypothetical protein COPCOM_02365 [Coprococcus comes ATCC 27758]
          Length = 557

 Score =  127 bits (318), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 48/200 (24%), Positives = 82/200 (41%), Gaps = 5/200 (2%)

Query: 11  DGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRS 69
           DG  ++FP   T   +A           V V +NGK+ +L   ++ + ++  +T  +   
Sbjct: 11  DGEERSFPAGTTYLQIAGEYQERYPHDIVLVYVNGKLQELGKKLKKDCALHFVTTGETIG 70

Query: 70  LAVIRHSCAHIMAEAVQSIWPEV---QVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKM 126
               R   + ++ +AV          QV I   ++ G+Y     +Q      LA+IE++M
Sbjct: 71  NLTYRRGVSFLLVKAVYDTIGHDKIEQVRIHFSVDKGYYCTIKGDQKLDQKLLARIEERM 130

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGP 186
            E+   D    K+ +  ++A E+F       K E L        V +Y   E+ D   G 
Sbjct: 131 HEMADMDLSIRKRSVHTDEAVEMFRKYGMKDK-ERLFRYRRVSTVNIYSINEFEDYYYGY 189

Query: 187 HVRSTGQVKKFFKLMKVAGA 206
            V STG +K F   +   G 
Sbjct: 190 MVPSTGYLKYFKLYLYDEGF 209


>gi|196008377|ref|XP_002114054.1| hypothetical protein TRIADDRAFT_58133 [Trichoplax adhaerens]
 gi|190583073|gb|EDV23144.1| hypothetical protein TRIADDRAFT_58133 [Trichoplax adhaerens]
          Length = 473

 Score =  126 bits (317), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 72/418 (17%), Positives = 143/418 (34%), Gaps = 53/418 (12%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANM 318
           +   G+ +      +    LI  +  ++      ++ TP ++   LWQ SG WD+  A M
Sbjct: 65  QSRPGLYYILPVALRAMYKLIKVVDEEMTRIGGSKLGTPCLIPADLWQSSGRWDTLGAEM 124

Query: 319 FAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLH 378
           F +K      +  R + L P +      +    L S   +P+RL +    +R+E    L 
Sbjct: 125 FKLKD-----RHNRHYCLGPTHEESISELVGTYLNSKNMMPLRLYQIDRKFRDEIRPRL- 178

Query: 379 GLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGS 437
           GL R R F   D + F    E   N    I    + I+   G   + V   +       S
Sbjct: 179 GLRRAREFWMKDMYSFDIDKEASLNSYEIICEAYVRIFNRLGLNVVKVVADSGAMGGDTS 238

Query: 438 DALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ 497
                 A++    +L  I +     +N   L           + + +  +    Q   IQ
Sbjct: 239 HEFHLIADDGEDEIL--ICDQCHKAMNMETLKSG--------DVMAECNLCEGKQNKNIQ 288

Query: 498 VDFNL---------PSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIEN----FK 543
               +              A  V    E    V +    +G  + R +   +E      K
Sbjct: 289 KYRGVEIGHAFYLGTKYSKAASVTYTDENNCKVYVEMGSYGIGVTRLLDAALEVQSTCNK 348

Query: 544 GNLPLWLSPIQAIVTTITS------------SAVEYAQEIANLLKSHHLSIETDFR---N 588
              P  ++P    +  + S            +   Y +     L++    +  D R   +
Sbjct: 349 IRWPSVITPYNICIVPLGSPKDNSSQQLLQLAQQLYDKLAVGKLQNE---VVIDDRIYLS 405

Query: 589 ETI--NYKIREHSIKKIPIIIICGDKEASE-RSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +T+    ++R+ ++   P +II G +   +   I +    + + Q + + + +  + +
Sbjct: 406 KTVGPGTRLRQATLLGYPYLIILGKQALQKQGYIELEDQLNGSKQNIHIDNIVDHIQQ 463


>gi|163791590|ref|ZP_02185991.1| prolyl-tRNA synthetase [Carnobacterium sp. AT7]
 gi|159873139|gb|EDP67242.1| prolyl-tRNA synthetase [Carnobacterium sp. AT7]
          Length = 568

 Score =  126 bits (317), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 44/216 (20%), Positives = 88/216 (40%), Gaps = 11/216 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        E+E   H+ L R   +  I+   SGV  +     ++ + L + MR +
Sbjct: 4   SKLFIPTLRDVPNEAEVLSHKMLLRAGYIRQIS---SGVYSYLPLANRVIEKLKTIMREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +  D  E+  P +L + LW++SG +++Y  ++  ++      +  R + L P +     
Sbjct: 61  FEKIDAVEMLMPSLLPRELWEESGRYETYGDDLMKLQD-----RHGRDYLLGPTHEEAFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +    + SY+ LP+ L +  + +R+E      GL+R R F   DA+ F    E +    
Sbjct: 116 TLIRDEITSYKRLPLSLYQIQTKFRDEKRPR-SGLLRGREFIMKDAYSFHDSYESLDETY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           L        I++  G +   +           S   
Sbjct: 175 LDFEKAYTRIFERCGLDFRSIIGDAGAMGGSNSKEF 210



 Score = 73.7 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 55/140 (39%), Gaps = 9/140 (6%)

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN----FKGNLPLWLSPIQAIVTTITSSAV 565
            V  ++ +  PV++     G   R +  + E        N P  LSP +  +  +   A 
Sbjct: 425 TVLDNNGRSIPVVMGCYGIGVT-RLLSAITEQQATEEGLNWPRHLSPFELHLVPVNMKAD 483

Query: 566 EYA---QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
           +      E+   L+    S+  D RNE +  K ++  +  +PI I  G K A E  + ++
Sbjct: 484 DQVTLSNELYETLQHAGFSVLLDDRNERVGVKFKDSDLIGLPIRITVGKK-AQENIVELK 542

Query: 623 RFGSTTTQKVSLLDAIPILT 642
              +    +V   + +  L 
Sbjct: 543 LRKTGEALEVRADELVDTLN 562


>gi|116617800|ref|YP_818171.1| prolyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|122271999|sp|Q03YC4|SYP_LEUMM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|116096647|gb|ABJ61798.1| Prolyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
          Length = 572

 Score =  126 bits (317), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 45/216 (20%), Positives = 88/216 (40%), Gaps = 11/216 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        E+E + H+ L +   +  IA    G+  +     ++   + + +R +
Sbjct: 4   SKLLMPTLRDIPAEAEVKSHQLLLKAGYIRPIAA---GMFSYLPLAKRVLNKIETIIREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +   D  E+  P+VL   LWQ+SG +++Y   ++  K   D     R F L P +     
Sbjct: 61  MDKIDANEMLVPEVLPAELWQRSGRYETYGPALYKFKNRQD-----RDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +    +KSY++LP+ + +  + +R+E      GL+R R F   DA+ F    E +    
Sbjct: 116 QLIADEIKSYKKLPLTVYQIQAKFRDENRPRF-GLLRTREFIMKDAYSFSADQEGLDEAF 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
             +     +I+   G E   +           S   
Sbjct: 175 HNMEEAYTNIFDRLGLEYRAIVGDAGAMGGSDSKEF 210



 Score = 66.7 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 48/129 (37%), Gaps = 9/129 (6%)

Query: 511 VNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTIT---SS 563
           V  ++ +   V++     G   R +  + E          P  ++P    +  I      
Sbjct: 428 VLDNNGRQTDVIMGSYGIGVS-RLLSAIAEQKADEDGLVWPASVAPFDIHIVPINMKDED 486

Query: 564 AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRR 623
               A+++  LL +  + +  D R E    K  +  +  +PI I  G K A E  + ++ 
Sbjct: 487 QARVAEQLETLLVAQGMEVLVDDRKERAGVKFADADLIGLPIRITVGKK-ADEDVVEVKV 545

Query: 624 FGSTTTQKV 632
             S T  ++
Sbjct: 546 RASNTNIEM 554


>gi|312879303|ref|ZP_07739103.1| prolyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
 gi|310782594|gb|EFQ22992.1| prolyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
          Length = 501

 Score =  126 bits (317), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 58/428 (13%), Positives = 142/428 (33%), Gaps = 66/428 (15%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
             +   + +  + R   L   A     ++     G+ I++ +  +     K+  +     
Sbjct: 30  RAQDFSQWYLDVIRVAGLADYAPVRGCMVV-RPTGYSIWEVIQKHFDEGFKETGHVNAYF 88

Query: 297 PQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P ++     + ++ H + +      V  A     +     ++P +      +++  ++S+
Sbjct: 89  PLLIPHSFLEKEAQHVEGFAPECAVVTHAGGEELE-EPLVVRPTSETVIGHMYSKWVQSW 147

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISI 414
           R+LP+ + ++ SV R E    L   +R   F   + H    T+++   E L +  +   I
Sbjct: 148 RDLPLLINQWCSVMRWEKRPRL--FLRTSEFLWQEGHTAHATRDEAMEETLTMLEVYRRI 205

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
                                                ++ +         +      GA 
Sbjct: 206 M------------------------------------VEELALPVVAGEKSEGERFPGAD 229

Query: 475 YGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
                E ++ D   +  Q GT   +  N    F   + +   +           +G   R
Sbjct: 230 NTFTCEAMMSD--KKALQAGTSHFLGQNFAKAFEIAFQDQDGQVQ---FAWTTSWGVSTR 284

Query: 534 FIGIMIENFKGN----LPLWLSPIQAIVTTITSSA-------VEYAQEIANLLKSH-HLS 581
            IG +I     +    LP  ++P++  +  I++            A+E+   L++     
Sbjct: 285 LIGALIMTHADDDGLVLPPHVAPVKVALLPISTDEERLASDLEPKARELVTALEARLGRR 344

Query: 582 -IETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS---LLD 636
            +  D + +     +   H  K +P+ +  G++E  E  +   R  +     +    L +
Sbjct: 345 SVALDTQYHMRPGDRFFSHLQKGVPLRLELGEREWQEGRVRAVRRDTGEKIDLPWDRLAE 404

Query: 637 AIPILTKE 644
            +P + ++
Sbjct: 405 EVPAILEQ 412


>gi|227432324|ref|ZP_03914317.1| prolyl-tRNA synthetase [Leuconostoc mesenteroides subsp. cremoris
           ATCC 19254]
 gi|227351930|gb|EEJ42163.1| prolyl-tRNA synthetase [Leuconostoc mesenteroides subsp. cremoris
           ATCC 19254]
          Length = 572

 Score =  126 bits (317), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 56/319 (17%), Positives = 116/319 (36%), Gaps = 28/319 (8%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        E+E + H+ L +   +  IA    G+  +     ++   + + +R +
Sbjct: 4   SKLLMPTLRDIPAEAEVKSHQLLLKAGYIRPIAA---GMFSYLPLAKRVLNKIETIIREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +   D  E+  P+VL   LWQ+SG +++Y   ++  K   D     R F L P +     
Sbjct: 61  MDKIDANEMLVPEVLPAELWQRSGRYETYGPALYKFKNRQD-----RDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +    +KSY++LP+ + +  + +R+E      GL+R R F   DA+ F    E +    
Sbjct: 116 QLIADEIKSYKKLPLTVYQIQAKFRDENRPRF-GLLRTREFIMKDAYSFSADQEGLDEAF 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
             +     +I+   G E   +           S      A             + +D I 
Sbjct: 175 HNMEEAYTNIFDRLGLEYRAIVGDAGAMGGSDSKEFSAPA------------AAGEDTIA 222

Query: 465 TGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVD-FNLPSRFNAFYVNSHSEKCHPVMI 523
                 +   Y    E        R      + ++  + P+      V +  +K    ++
Sbjct: 223 Y----SDATDYAANLEMAKDFYERRSATAEQLALEKISTPNEKTIDDVATILDKLKNELV 278

Query: 524 HRAVFGSIERFIGIMIENF 542
              +F + E  + ++    
Sbjct: 279 KTIMFVADEELVAVVTTGD 297



 Score = 67.1 bits (162), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 49/129 (37%), Gaps = 9/129 (6%)

Query: 511 VNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTIT---SS 563
           V  ++ +   V++     G   R +  + E          P  ++P +  +  I      
Sbjct: 428 VLDNNGRQTDVIMGSYGIGVS-RLLSAIAEQKADEDGLVWPASVAPFEIHIVPINMKDED 486

Query: 564 AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRR 623
               A+++  LL +  + +  D R E    K  +  +  +PI I  G K A E  + ++ 
Sbjct: 487 QARVAEQLETLLVAQGMEVLVDDRKERAGVKFADADLIGLPIRITVGKK-ADEDVVEVKV 545

Query: 624 FGSTTTQKV 632
             S T  ++
Sbjct: 546 RASNTNIEM 554


>gi|182414610|ref|YP_001819676.1| prolyl-tRNA synthetase [Opitutus terrae PB90-1]
 gi|177841824|gb|ACB76076.1| prolyl-tRNA synthetase [Opitutus terrae PB90-1]
          Length = 590

 Score =  126 bits (317), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 52/224 (23%), Positives = 83/224 (37%), Gaps = 8/224 (3%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  +        ++E   H+ L R   +  +   G G+  +   G ++ Q L    R 
Sbjct: 4   WSQYFVPTLKESPADAEIASHKLLIRAGLVRKL---GGGLYTYLPLGLRVMQKLTQLCRE 60

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT--FALKPMNCP 342
           +++     E+  P V    LWQQ   W + R  MF    A D     R   F L P +  
Sbjct: 61  ELERAGAIELWMPHVHPVELWQQGPRWAAAREIMFRADSAGDGKHGPREPEFVLGPTHEE 120

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN 402
               +    + SYR+LP    +  + +RNE      GLMR R F   DA+ F   +    
Sbjct: 121 IVTPLVKAEITSYRDLPKNFFQIATKFRNEIRPRF-GLMRAREFVMMDAYSFDVDDDRAI 179

Query: 403 ECLKIHNLIIS-IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
           +  +         ++  G + I V+  T       S      AE
Sbjct: 180 KSYQAMKAAYEAFFRRIGVQAIAVEADTGVMGGSFSHEFMVPAE 223



 Score = 64.8 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/153 (16%), Positives = 57/153 (37%), Gaps = 8/153 (5%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I  +      +  A Y     ++ H +++     G       I+ ++   +  
Sbjct: 419 RGIEVGHIFKLGTKYSEKSGAVY-TDDQKQSHLMVMGSYGIGISRTLQAIIEQSHDADGI 477

Query: 548 LWL---SPIQAIVTTITS---SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W    +P   ++  +      AV+ A+++A   +     +  D R E    K ++  + 
Sbjct: 478 VWPWNSAPFHVLICVLDPQLAEAVDLARKLAAAAEKAGAEVLVDDRAERPGVKFKDADLV 537

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
            IP+ +  G K   E  + ++        KV L
Sbjct: 538 GIPLRLTIGGKGLKEGVVELKWRHQKDVAKVPL 570


>gi|323339428|ref|ZP_08079710.1| proline--tRNA ligase [Lactobacillus ruminis ATCC 25644]
 gi|323093139|gb|EFZ35729.1| proline--tRNA ligase [Lactobacillus ruminis ATCC 25644]
          Length = 572

 Score =  126 bits (317), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 42/220 (19%), Positives = 95/220 (43%), Gaps = 11/220 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++E   H+ + R   +  I    +G+  +    +++ + + + +R +
Sbjct: 4   SKLLIPTLKEVPSDAEAISHQLMLRGGYIKQI---TAGMYAYLPLAYRVLRNIEAIIREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +++ D  E+  P  L   LWQQ+G +++Y  N+F  +      +  R F L P +     
Sbjct: 61  MENIDAAEMLVPAALPAELWQQTGRYETYGPNLFKFQD-----RHERDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    +K+Y++LP+ L +  + YR+E      GL+R R F   DA+ F  +E+  ++  
Sbjct: 116 TIVRDAVKTYKKLPITLYQIQTKYRDENRPRF-GLLRGREFIMKDAYSFHAEEESLDKTF 174

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
           + + +   +++   G     +           S      A
Sbjct: 175 RDMDSAYTNVFNRVGLNFRSIIGDAGAMGGNNSKEFMAIA 214



 Score = 88.3 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 35/169 (20%), Positives = 66/169 (39%), Gaps = 11/169 (6%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPL 548
           R  + G I       S+     V   + +  P+++     G       I+ ++   N  +
Sbjct: 404 RGIEIGHIFKLGTRYSKDLDAVVLDENGRQLPIIMGCYGIGVSRLLSAIVEQHSDENGIV 463

Query: 549 WL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
           W    +P    V  +       VE ++++  LL++    +  D R E    K  +  +  
Sbjct: 464 WPRSIAPFDVHVIPVNVKKEEQVELSEKVTELLENAGYKVLVDDRKERPGVKFADSDLIG 523

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP----ILTKESLP 647
           IP  I  G K A+E  + I+   +  T +V L + +     +L +ESL 
Sbjct: 524 IPARITVGKK-AAEGIVEIKLRRTGETLEVKLDELLNSLQILLKEESLA 571


>gi|332297614|ref|YP_004439536.1| phosphoribulokinase/uridine kinase [Treponema brennaborense DSM
           12168]
 gi|332180717|gb|AEE16405.1| phosphoribulokinase/uridine kinase [Treponema brennaborense DSM
           12168]
          Length = 550

 Score =  126 bits (317), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 48/238 (20%), Positives = 91/238 (38%), Gaps = 3/238 (1%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           I+LT P G            D  ++      +   AV IN ++  L+  +     +E + 
Sbjct: 4   IELTLPSGKKVTAAAGVRALDFTQTFDCD-PETVFAVRINNEIRALNTVLDVNAVLEPVV 62

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
                  A+ R +   I+A A    +P  ++ +G  +  G+YY  + E+   ++++A ++
Sbjct: 63  SGSRDGSAIYRRTLCFILAAAAHECFPGTRLLVGHSLGYGYYYTLETEKTPGAEDIAALK 122

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +MQ IIA + P     +S+  A  LFES       + L  I     + +   G + D  
Sbjct: 123 AEMQRIIAWNQPIETDTVSYRDAAALFESLGLTETRKQLNYI-CPPKIAVNTLGSFSDQY 181

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
            GP + +TG++K F  +    G   R  +                  +        + 
Sbjct: 182 FGPLLDTTGKIKAFDLMPYGEGFLLRFPATAQPDCLPVFEDIPQLFAVYSRYKKWGKQ 239


>gi|317495744|ref|ZP_07954109.1| prolyl-tRNA synthetase [Gemella moribillum M424]
 gi|316914197|gb|EFV35678.1| prolyl-tRNA synthetase [Gemella moribillum M424]
          Length = 566

 Score =  126 bits (317), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 46/226 (20%), Positives = 86/226 (38%), Gaps = 11/226 (4%)

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
           E   H+ L +   +  ++    GV  +     K+ Q +   +R +       E+  P + 
Sbjct: 19  EAISHKLLIKAGMVKQVSA---GVYTYLPLATKVIQNIERVIREEHDKIGAVELLMPLLQ 75

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            +  W++SG W      +  +K      +    +AL P          N+ L SY++LP+
Sbjct: 76  SEDYWKESGRWYKMGDELMRLKD-----RKGAGYALSPTAEEIICQTVNNMLTSYKQLPM 130

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT-KEQMFNECLKIHNLIISIYKDFG 419
            L +  + +R+E    L GL+R + F   D + F    E +    L  +N   +I+  F 
Sbjct: 131 NLYQIQTKFRDEMRPRL-GLLRGKEFIMKDGYSFHDSPESLRETYLDYYNAYSNIFDRFE 189

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
            +   VK  +       +      AE     +  T ++     I T
Sbjct: 190 LKYRAVKADSGNIGGSYTHEFQALAEIGEDTIAYTEESDYAANIET 235



 Score = 81.4 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 26/182 (14%), Positives = 69/182 (37%), Gaps = 14/182 (7%)

Query: 467 VLLGEGAFY-GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
           +  G+ A     K ++     +G+ ++ G            N  Y++++  + +   +  
Sbjct: 387 IEEGDIAEDLSGKIKFAKGIEVGQVFELGK-----GYSEAMNITYLDANG-RANHFYMGC 440

Query: 526 AVFGSIERFIGIMIENFKGNLPLWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHH 579
              G       I+ ++      +W    +P Q  +  +       +E ++++   L S  
Sbjct: 441 YGIGVSRVISAIIEQHNDEKGIIWPKEVAPFQVHLVCVDVKKQEQLELSEKLYAELTSAG 500

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
            ++  D R E    K  +  +  IP+ ++ G K A+E  + ++   +      S+ + + 
Sbjct: 501 YTVLYDDRAERAGVKFNDADLIGIPLQVVVGKK-ATEGIVEVKERKTLEKVDTSITEVLS 559

Query: 640 IL 641
            +
Sbjct: 560 KV 561


>gi|194467742|ref|ZP_03073728.1| prolyl-tRNA synthetase [Lactobacillus reuteri 100-23]
 gi|194452595|gb|EDX41493.1| prolyl-tRNA synthetase [Lactobacillus reuteri 100-23]
          Length = 577

 Score =  126 bits (316), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 42/221 (19%), Positives = 91/221 (41%), Gaps = 11/221 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++E   H+ + R   ++ ++    GV  +    +++ + + + +R +
Sbjct: 4   SKVLIPTKKEVPSDAEALSHKMMIRAGYIYQVSA---GVWSYLPLAYRVIRKVENIIRDE 60

Query: 287 IK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P +L   LW++SG ++SY  N+F +K   D     R F L P +     
Sbjct: 61  MDKAGAVEMLMPGLLPADLWKESGRYESYGDNLFKLKDRRD-----RDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            V    +KSY++LP+ + +    +R+E     +G++R + F   D + F    E +    
Sbjct: 116 EVLRDSIKSYKKLPLVVYQLQDKFRDEDRPR-YGILRGKEFEMLDGYSFSADQEGLDEAY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
                   +I+   G    ++   +       S      AE
Sbjct: 175 NNQAKAYRNIFDRIGLNYKVILADSGTMGGKNSQEFSAPAE 215



 Score = 75.6 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 66/182 (36%), Gaps = 15/182 (8%)

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
           V  GE A  G   ++     IG  ++ GT     +  S+  A  ++S+  +   V++   
Sbjct: 391 VKEGEIAPDGKPLKFTPGIEIGHIFKLGT-----HYSSKLGAQVLDSNG-RLTDVIMGSY 444

Query: 527 VFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHH 579
             G   R +  + E          P  ++P    V  +       +  A +I   L    
Sbjct: 445 GIGVT-RLLSAVAEQNADENGLVWPDSIAPFDVHVIPVNAKKEDQMAMADKIDQQLTEAG 503

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
             +  D R E    K  +  +  IPI +  G K A +  + I+   +  T +V   + + 
Sbjct: 504 YEVLVDDRKERAGVKFADSDLIGIPIRVTVGKK-AQDGIVEIKIRKTGETVEVKQEELVN 562

Query: 640 IL 641
            +
Sbjct: 563 TV 564


>gi|160937103|ref|ZP_02084466.1| hypothetical protein CLOBOL_01993 [Clostridium bolteae ATCC
           BAA-613]
 gi|158440004|gb|EDP17752.1| hypothetical protein CLOBOL_01993 [Clostridium bolteae ATCC
           BAA-613]
          Length = 556

 Score =  126 bits (316), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 47/198 (23%), Positives = 85/198 (42%), Gaps = 4/198 (2%)

Query: 12  GSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIEIITPEDPRSLA 71
           G  K +P   T  +VA    +      + V +NGK+ +L   V++  +  +T +D   ++
Sbjct: 14  GITKEYPEGTTWMEVAREHQKEYEYDILLVRVNGKLQELHKQVKDCELSFVTAKDKPGMS 73

Query: 72  VIRHSCAHIMAEAVQSIWPEVQ---VAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQE 128
             + S + +M +A  S+        + I   I  GF+ +       + + L  ++ KM+E
Sbjct: 74  AYQRSASLMMLKAFYSVAGAGNVEKLMIDFSIGRGFFVEARGNFVLNQEFLDAVKAKMRE 133

Query: 129 IIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
            + R  P +K+ +S + A ELFE      K   L        V +Y    + D   G  V
Sbjct: 134 YVERKIPIMKRSVSTDDAIELFEKLGMYDKAR-LFRYRMVSRVNIYSIDGFEDYYYGYMV 192

Query: 189 RSTGQVKKFFKLMKVAGA 206
           ++TG +K F  +    G 
Sbjct: 193 QNTGYIKHFDLIPYHYGF 210


>gi|302871149|ref|YP_003839785.1| AAA ATPase [Caldicellulosiruptor obsidiansis OB47]
 gi|302574008|gb|ADL41799.1| AAA ATPase [Caldicellulosiruptor obsidiansis OB47]
          Length = 554

 Score =  126 bits (316), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 47/241 (19%), Positives = 89/241 (36%), Gaps = 5/241 (2%)

Query: 2   PSDIKLTFPDGSIKN-FPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
            S +++ F D +I     V                   VA  ++ ++ +L   + R+  +
Sbjct: 5   SSTVRVFFEDVNICEDVEVGTNLLSFVPRFESYFKSPIVAAKVDNEIKELKYVISRDCRV 64

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           + I       + + R S   ++  A + ++ E  V +   +  G Y + +  +  SS ++
Sbjct: 65  KFIDMTQEDGMRIYRRSLIFVLIVATRMLFKEA-VNVQHSLSKGLYCEVE-NRKLSSQDI 122

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             I++KM+ II +D  F ++ +S E A +LFE K    K   +      E V +Y  G++
Sbjct: 123 ELIKQKMKWIIEQDFQFKREKVSKEDAVKLFEEKGFYDKARTI-KFSENEYVYIYYCGDY 181

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            D   G  V STG +K F  +    G                         +        
Sbjct: 182 VDYFYGHLVPSTGYLKIFDLIQYHDGMVLMYPDKSDPFKLQEFVENKKLFAVYHEYKNWG 241

Query: 240 E 240
            
Sbjct: 242 R 242


>gi|76156813|gb|AAX27938.2| SJCHGC03429 protein [Schistosoma japonicum]
          Length = 218

 Score =  126 bits (316), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 40/113 (35%), Positives = 61/113 (53%), Gaps = 3/113 (2%)

Query: 3   SDIKLTFPDGSIKNF-PVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIE 60
           S I++T PDG+I +      T  +VA+SIS++LA+ AV   +NG++ DL  P  +  S+E
Sbjct: 70  SPIQITLPDGTILDAKAWETTPMEVAKSISKTLAEHAVIAKVNGELWDLLRPFEKSSSLE 129

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQP 113
           I          V  HS AH++ EA++       +  GP +E+GFYYD      
Sbjct: 130 IYNFNHKDGQYVFWHSSAHVLGEALERC-CSGHLCYGPPVEEGFYYDMWVPNQ 181


>gi|229817161|ref|ZP_04447443.1| hypothetical protein BIFANG_02420 [Bifidobacterium angulatum DSM
           20098]
 gi|229784950|gb|EEP21064.1| hypothetical protein BIFANG_02420 [Bifidobacterium angulatum DSM
           20098]
          Length = 637

 Score =  126 bits (316), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 51/272 (18%), Positives = 96/272 (35%), Gaps = 31/272 (11%)

Query: 247 RKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLW 305
           + L R   L    +   G+  W   G  +   + + +R ++   + +E++   +L +  +
Sbjct: 59  KLLQRAGYLR---KAAPGIWTWLPLGLNVLNKIENIIREEMASINAQEVHFSGLLPREPY 115

Query: 306 QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEF 365
           + +  W+ Y  N+F +K      +    + L P +      +      SY++LPV L + 
Sbjct: 116 EATHRWEEYGDNIFRLKD-----RHEADYLLAPTHEEMFTLLVKDLYSSYKDLPVTLYQI 170

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIM 424
            + YR+E      GL+R R F   DA+ F    E +    +        I+K    + + 
Sbjct: 171 QTKYRDEFRPR-AGLIRGREFIMKDAYSFTLDKEGLVKAYMDERGAYERIFKRLDLDYVP 229

Query: 425 VKLSTRPEKRVGSDALWDDAE-------------NIMKGVLDTIKNSSQDRINTGVLLGE 471
           V     P     S+      E                   L T +  + D  NT      
Sbjct: 230 VHAMAGPMGGFESEEFLAPMEIGEDTFAQSPSGKAWNVEALTTPEPPAIDYSNTPAATKR 289

Query: 472 GAFYGPKFEYILKDA-------IGRDWQCGTI 496
                   + +++ A        GR+WQ   I
Sbjct: 290 PTPDAATIDKMVEFANVNHPRTDGREWQASDI 321



 Score = 81.0 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 27/162 (16%), Positives = 61/162 (37%), Gaps = 12/162 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN- 545
           R  + G + Q+     +      ++ + +    V +    +G  + R +  + E      
Sbjct: 475 RGVEIGQVFQLGLKYSNALGLKVLDQNGKT---VPVWMGSYGIGVSRVMACIAETHHDER 531

Query: 546 ---LPLWLSPIQAIVTTIT--SSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHS 599
               P  ++P Q  V        A E A+++   L++  + +  D R + +   K ++  
Sbjct: 532 GLAWPSCIAPAQVHVVATGKDEKAFEGAEQLIAELEAKGVEVIFDDRKKVSPGVKFKDAE 591

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           +  +P I + G    ++ +I IR         V   +A+  L
Sbjct: 592 LIGVPQIAVVGRDYVNDGTIEIRDRNGDNKVIVPAAEAVETL 633


>gi|157736649|ref|YP_001489332.1| prolyl-tRNA synthetase [Arcobacter butzleri RM4018]
 gi|166980098|sp|A8ERT9|SYP_ARCB4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|157698503|gb|ABV66663.1| prolyl-tRNA synthetase [Arcobacter butzleri RM4018]
          Length = 568

 Score =  126 bits (316), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 46/221 (20%), Positives = 86/221 (38%), Gaps = 11/221 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  +        ++    H+ L R      IA+ G+G+  +   G  + + + + ++ 
Sbjct: 3   FSKMFIPTTKETPNDATLPSHQYLVRGG---FIAQTGAGIYDFMPLGKIVLEKIRAIVKE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E+    V    LWQ+SG   +  A M   K   +       F L P N    
Sbjct: 60  EMDEAGANEVQFGFVTPLTLWQESGRATTMGAEMLRFKDRKNG-----EFVLSPTNEEAV 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           V +  + + SY++LP+ L +  + +R+E      GLMR R F   D + F + E+     
Sbjct: 115 VNMVKNRITSYKDLPLHLYQINTKFRDEARPRF-GLMRGREFLMKDGYSFHSSEEDLVRE 173

Query: 405 LKIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
             +       IY   G +  +V   +      GS      A
Sbjct: 174 FNLMETTYKKIYTKLGLDFRVVAADSGAIGGSGSKEFHVIA 214



 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/161 (18%), Positives = 59/161 (36%), Gaps = 11/161 (6%)

Query: 491 WQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNLPLW 549
                 Q+     S  NA +++ +  K  P ++     G   R +  +IE N      +W
Sbjct: 408 EAGHIFQLGTKYSSAMNANFLDENG-KAKPFIMGCYGIGVS-RLVAAVIEQNHDDKGCIW 465

Query: 550 L---SPIQAIVTTITSSAVEYAQ---EIANLLKSHHLSIETDFR-NETINYKIREHSIKK 602
               +P    +    S   E A+   E+ + LK   +S   D R N    +K+ +  +  
Sbjct: 466 TKATAPFMVDIIVSNSKKEEEAKVGEELYSKLKQAGISTILDDRINARFGFKMSDFELLG 525

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            P  ++ G K   +  + I    +     V + + I  + +
Sbjct: 526 FPYAVVIGKK-LEDGLVEIVDRKTLEKIDVKVDEVISKILE 565


>gi|158522069|ref|YP_001529939.1| prolyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
 gi|158510895|gb|ABW67862.1| prolyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
          Length = 508

 Score =  126 bits (316), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 69/444 (15%), Positives = 150/444 (33%), Gaps = 71/444 (15%)

Query: 228 QQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI 287
           +QE         E+    ++++ +  DL   +     ++     G+ I++ +   +    
Sbjct: 3   KQEQAAISPTRAENYSEWYQQVVKAADLAETSPVRGCMVI-KPWGYAIWENIRQALDGMF 61

Query: 288 KD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLR---------TFAL 336
           K    +    P  +     + ++ H + +      V       KD R            +
Sbjct: 62  KAAGVKNAYFPLFIPLEFLEREAEHVEGFAKECAVVTHHRLEAKDGRLVPAGELTEPLVV 121

Query: 337 KPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT 396
           +P +       F+  +KSYR+LPV + ++ +V R E        +R   F   + H    
Sbjct: 122 RPTSETIIGESFSRWVKSYRDLPVLINQWANVVRWEMR--TRIFLRTSEFLWQEGHTVHA 179

Query: 397 KEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIK 456
                 E +++   ++++Y+                           A + +   +    
Sbjct: 180 D---AAEAMELARHMLNLYEKL-------------------------ATDYLAIPVIKGN 211

Query: 457 NSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE 516
            S  +R         GA      E +++D   +  Q GT        +R  A  +   SE
Sbjct: 212 KSDSERFP-------GAVETFCIEAMMQDR--KALQAGTSHFLGQNFAR--ASKILFQSE 260

Query: 517 KCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVE------ 566
           +    +     +G   R IG +I    ++    +P  ++P   ++  I     +      
Sbjct: 261 QGKEELAWTTSWGVSTRLIGGLIMCHADDDGMIMPPAIAPAHVVLLPIFKKDSDRETVMA 320

Query: 567 YAQEIANLLKSHHLS-----IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
           Y   +A  L+          +E D R+     +  E   K IP+ +  G K+  ++S+ +
Sbjct: 321 YTDTLAARLREKQYMGRPVGVEIDTRD-IGGARGWEWIKKGIPLRVEIGPKDIEKQSVFV 379

Query: 622 RRFGSTTTQKVSL--LDAIPILTK 643
            R      +K+S+     +  +  
Sbjct: 380 GRRDMGHREKMSVPTDRFVEDIAD 403


>gi|218782927|ref|YP_002434245.1| prolyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
 gi|218764311|gb|ACL06777.1| Prolyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
          Length = 505

 Score =  126 bits (316), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 62/449 (13%), Positives = 153/449 (34%), Gaps = 81/449 (18%)

Query: 228 QQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI 287
           +Q  T      EE     ++++ +  DL   +     ++     G+ +++ +++ + R  
Sbjct: 3   KQMKTAITPTREEDYPEWYQQVVKASDLAENSPVRGCMVI-KPWGYAVWEKIVANLDRMF 61

Query: 288 KD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDL----------RTFA 335
           K+   +    P  +      +++ H + +      V                        
Sbjct: 62  KETGVKNAYFPLFIPLRFLQKEAKHVEGFATECAVVTHHRLEKGPDGNLVPAGELTEPLI 121

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC 395
           ++P +       F+  + SYR+LP+ L ++ +V R E        +R   F   + H   
Sbjct: 122 VRPTSETIIGDSFSRWVSSYRDLPILLNQWANVVRWEMRP--RVFLRTAEFLWQEGHTVH 179

Query: 396 -TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDT 454
            T E+ +     + N+     ++F    ++    +  E+                     
Sbjct: 180 ATSEEAYERTEMMLNVYADFVEEFLAMPVLRGAKSPAERF-------------------- 219

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNS 513
                            GA      E +++D   +  Q GT   +  N        + ++
Sbjct: 220 ----------------PGAVDTLCIEAMMQDR--KALQAGTSHFLGQNFAVASEIKFQSA 261

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSS------ 563
             ++ +        +G+  R +G +I    ++    LP  ++P Q ++  I         
Sbjct: 262 EGKEEYA---WTTSWGASTRLMGGLIMVHSDDDGLVLPPRIAPAQVVLMPIIKKEETRQA 318

Query: 564 AVEYAQEIANLLKSHHLS-----IETDFRNETINYKIR--EHSIKKIPIIIICGDKEASE 616
            ++Y   +A+ L++         +E D ++       R  +   K +PI +  G ++  +
Sbjct: 319 VMDYTNSLADELRALDFHGEKLSVEIDDKD-KPG---RAWDWIKKGVPIRVEIGPRDMEK 374

Query: 617 RSIGIRRFGSTTTQKVSLL--DAIPILTK 643
            ++ + R  +   +K S+   D +  +  
Sbjct: 375 NAVFMGRRDTPGHKKESMDRSDFVAKVVD 403


>gi|119025474|ref|YP_909319.1| prolyl-tRNA synthetase [Bifidobacterium adolescentis ATCC 15703]
 gi|152112217|sp|A1A0K4|SYP_BIFAA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|118765058|dbj|BAF39237.1| prolyl-tRNA synthetase [Bifidobacterium adolescentis ATCC 15703]
          Length = 605

 Score =  126 bits (316), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 39/196 (19%), Positives = 76/196 (38%), Gaps = 11/196 (5%)

Query: 247 RKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLW 305
           + L R   L    +   G+  W   G  +   + + +R ++   D +E++   +L +  +
Sbjct: 22  KLLQRACYLR---KAAPGIWTWLPLGLNVLNKIENIIREEMASIDAQEVHFSGLLPREPY 78

Query: 306 QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEF 365
           + +  W+ Y  N+F +K      +    + L P +      +      SY++LPV L + 
Sbjct: 79  EATHRWEEYGDNIFRLKD-----RHEADYLLAPTHEEMFTLLVKDLYSSYKDLPVTLYQI 133

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIM 424
            + YR+E      GL+R R F   DA+ F    E +    +        I+     + + 
Sbjct: 134 QTKYRDEFRPR-AGLIRGREFIMKDAYSFTLDKEGLVKAYMDERGAYERIFNRLDLKYVP 192

Query: 425 VKLSTRPEKRVGSDAL 440
           V     P     S+  
Sbjct: 193 VHAMAGPMGGFESEEF 208



 Score = 83.7 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 26/164 (15%), Positives = 62/164 (37%), Gaps = 12/164 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN- 545
           R  + G + Q+     +      ++ + +    V +    +G  + R +  + E      
Sbjct: 438 RGVEIGQVFQLGLKYSNALGLKVLDQNGKT---VPVWMGSYGIGVSRVMACIAETHHDEK 494

Query: 546 ---LPLWLSPIQAIVTTITSSAVEY--AQEIANLLKSHHLSIETDFRNE-TINYKIREHS 599
               P  ++P Q  V      A  +  A+++   L++  + +  D R + +   K ++  
Sbjct: 495 GLAWPAVIAPAQVHVVATGKDAAAFEAAEQLIGELEAKGIEVIFDDRKKVSPGVKFKDAE 554

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  +PII + G    +  +I +R       + V + DA   +  
Sbjct: 555 LIGVPIIAVAGRDTVNNGTIEVRDRNGENAEAVPVADAAQAIAD 598


>gi|154486903|ref|ZP_02028310.1| hypothetical protein BIFADO_00736 [Bifidobacterium adolescentis
           L2-32]
 gi|154084766|gb|EDN83811.1| hypothetical protein BIFADO_00736 [Bifidobacterium adolescentis
           L2-32]
          Length = 611

 Score =  126 bits (316), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 39/196 (19%), Positives = 76/196 (38%), Gaps = 11/196 (5%)

Query: 247 RKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLW 305
           + L R   L    +   G+  W   G  +   + + +R ++   D +E++   +L +  +
Sbjct: 28  KLLQRACYLR---KAAPGIWTWLPLGLNVLNKIENIIREEMASIDAQEVHFSGLLPREPY 84

Query: 306 QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEF 365
           + +  W+ Y  N+F +K      +    + L P +      +      SY++LPV L + 
Sbjct: 85  EATHRWEEYGDNIFRLKD-----RHEADYLLAPTHEEMFTLLVKDLYSSYKDLPVTLYQI 139

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIM 424
            + YR+E      GL+R R F   DA+ F    E +    +        I+     + + 
Sbjct: 140 QTKYRDEFRPR-AGLIRGREFIMKDAYSFTLDKEGLVKAYMDERGAYERIFNRLDLKYVP 198

Query: 425 VKLSTRPEKRVGSDAL 440
           V     P     S+  
Sbjct: 199 VHAMAGPMGGFESEEF 214



 Score = 83.7 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 26/164 (15%), Positives = 62/164 (37%), Gaps = 12/164 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN- 545
           R  + G + Q+     +      ++ + +    V +    +G  + R +  + E      
Sbjct: 444 RGVEIGQVFQLGLKYSNALGLKVLDQNGKT---VPVWMGSYGIGVSRVMACIAETHHDEK 500

Query: 546 ---LPLWLSPIQAIVTTITSSAVEY--AQEIANLLKSHHLSIETDFRNE-TINYKIREHS 599
               P  ++P Q  V      A  +  A+++   L++  + +  D R + +   K ++  
Sbjct: 501 GLAWPAVIAPAQVHVVATGKDAAAFEAAEQLIGELEAKGIEVIFDDRKKVSPGVKFKDAE 560

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  +PII + G    +  +I +R       + V + DA   +  
Sbjct: 561 LIGVPIIAVAGRDTVNNGTIEVRDRNGENAEAVPVADAAQAIAD 604


>gi|307564814|ref|ZP_07627342.1| phosphoribulokinase/uridine kinase family protein [Prevotella amnii
           CRIS 21A-A]
 gi|307346536|gb|EFN91845.1| phosphoribulokinase/uridine kinase family protein [Prevotella amnii
           CRIS 21A-A]
          Length = 553

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 43/217 (19%), Positives = 90/217 (41%), Gaps = 3/217 (1%)

Query: 1   MPSDIKLTFPDGSIKNFPV-HATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-S 58
           M   IK+   + +        +T  D+      ++    V+  +N KV  L   V +   
Sbjct: 1   MEQKIKIRCKNNNKIILAKRGSTLEDIYSLTGLNIPYGPVSARVNNKVEGLHFCVYQNKD 60

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           +E +    P  +     S   ++ +AV  ++P  +V I   I +G+Y +         ++
Sbjct: 61  VEYLGLNTPSGIRTYTRSLFMVLCKAVHDLYPGSEVIIDIPISNGYYCNLSLGHKVEEED 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           + +I  +M +II  + P  +   + E+A ++F    +  KV++L+S  +  +V  Y   +
Sbjct: 121 VYKIRNRMSQIIEANLPIQRFESTTEEAIDMFAKLGDEAKVKLLKSSTSLYSV-FYVLDD 179

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRP 215
           + D   G  +  T ++  F   +   G   R  S + 
Sbjct: 180 YIDYYYGSMLTKTKEITLFGLELYYDGVLLRIPSVKD 216


>gi|215741276|dbj|BAG97771.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 366

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 53/292 (18%), Positives = 109/292 (37%), Gaps = 56/292 (19%)

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECL 405
           +F   ++SYR+LP+ + ++ +V R E        +R   F   + H    T E+   E +
Sbjct: 1   MFTKWIQSYRDLPLMINQWANVTRWEMR--TKPFIRTLEFLWQEGHTAHATLEEAEKEAM 58

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
           ++ ++      +     ++    +R E   G                             
Sbjct: 59  QMIDVYTKFAYEQAAIPVIPGRKSRVETFAG----------------------------- 89

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIH 524
                  A      E ++ D   +  Q GT   +  N    F   +++ +S+  H   + 
Sbjct: 90  -------ANRTYTIEAMMGDR--KALQAGTSHNLGQNFSRAFGTQFMDENSQIEH---VW 137

Query: 525 RAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTI------TSSAVEYAQEIANL 574
           +  +    RF+G +I     +    LP  ++PIQ ++  I       S+ +E    + N 
Sbjct: 138 QTSWAISTRFVGGIIMTHGDDAGLMLPPNIAPIQVVIVPIWKKGDEKSAVMEAVSSVQNT 197

Query: 575 LKSHHLSIETDFRN-ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
           LK   + ++ D     T  +K   + +K +PI +  G ++ + +S+ I R  
Sbjct: 198 LKEAGIRVKVDDSELRTPGWKFNFYEMKGVPIRLEIGPRDVTNKSVVISRRD 249


>gi|184155197|ref|YP_001843537.1| prolyl-tRNA synthase [Lactobacillus fermentum IFO 3956]
 gi|226701302|sp|B2GBM5|SYP_LACF3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|183226541|dbj|BAG27057.1| prolyl-tRNA synthase [Lactobacillus fermentum IFO 3956]
          Length = 573

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 51/306 (16%), Positives = 117/306 (38%), Gaps = 22/306 (7%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  +        ++E   H+ + R   ++ ++    GV  +    +++ + +   +R +
Sbjct: 4   SQMLIPTQKEAPADAEVLSHKMMVRAGYIYQVSA---GVWAYLPLAYRVIRKIEQIIREE 60

Query: 287 IK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E+  P +L   LW++SG +++Y  N+F +K      +  R F L P +     
Sbjct: 61  MDKAGAVEMLLPGLLPADLWKESGRYEAYGDNLFKLKD-----RRERDFILGPTHEETVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           ++    + SY++LP+ + +    YR+E     +G++R + F   D + F   +   ++  
Sbjct: 116 SILRDAIHSYKKLPLVVYQLQDKYRDEDRPR-YGILRGKEFEMLDGYSFSADQAGLDQAY 174

Query: 406 KIH-NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            +      +I+   G +  ++   +       S      A  I + V+          + 
Sbjct: 175 DLQAKAYRNIFDRIGLDYKVILADSGTMGGKNSQEFSAPA-AIGEDVIAYTDGDYAANLE 233

Query: 465 -------TGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK 517
                      +GE A    K       A   D    ++ ++ +   +   F      E+
Sbjct: 234 KATTKFTPTKQIGEEAELTKK---ATPGAHTVDEAAESLGLEASQILKSMVFLAKFEGEE 290

Query: 518 CHPVMI 523
             PVM+
Sbjct: 291 LKPVMV 296



 Score = 80.2 bits (196), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 39/189 (20%), Positives = 70/189 (37%), Gaps = 16/189 (8%)

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
            V  GE A  G   ++     IG  ++ GT     +    F A  ++ +  +  P+++  
Sbjct: 390 TVQEGETAPDGLPIKFTNGIEIGHIFKLGT-----HYSEVFGATVLDQNG-RDVPMIMGC 443

Query: 526 AVFGSIERFIGIMIENFKGNLPLWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHH 579
              G       I  +N   N  +W    +P    V  +       +  A+ I   L+   
Sbjct: 444 YGIGVSRLLSAISEQNADENGLVWPQAVAPFDIHVIPVNAKKEDQMAMAEGITANLEEAG 503

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA-- 637
             +  D R E    K  +  +  +PI +  G K A E  + I+   +  T +V   +   
Sbjct: 504 YEVLVDDRKERAGVKFADADLIGVPIRVTVGKK-AGEGIVEIKIRKTGETLEVHKEELAT 562

Query: 638 -IPILTKES 645
            I IL K++
Sbjct: 563 NIAILLKQT 571


>gi|225350874|ref|ZP_03741897.1| hypothetical protein BIFPSEUDO_02448 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225158330|gb|EEG71572.1| hypothetical protein BIFPSEUDO_02448 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 611

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 39/196 (19%), Positives = 76/196 (38%), Gaps = 11/196 (5%)

Query: 247 RKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLW 305
           + L R   L    +   G+  W   G  +   + + +R ++   D +E++   +L +  +
Sbjct: 28  KLLQRACYLR---KAAPGIWTWLPLGLNVLNKIENIIREEMASIDAQEVHFSGLLPREPY 84

Query: 306 QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEF 365
           + +  W+ Y  N+F +K      +    + L P +      +      SY++LPV L + 
Sbjct: 85  EATHRWEEYGDNIFRLKD-----RHEADYLLAPTHEEMFTLLVKDLYSSYKDLPVTLYQI 139

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIM 424
            + YR+E      GL+R R F   DA+ F    E +    +        I+     + + 
Sbjct: 140 QTKYRDEFRPR-AGLIRGREFIMKDAYSFTLDKEGLVKAYMDERGAYERIFNRLDLKYVP 198

Query: 425 VKLSTRPEKRVGSDAL 440
           V     P     S+  
Sbjct: 199 VHAMAGPMGGFESEEF 214



 Score = 81.8 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 26/162 (16%), Positives = 59/162 (36%), Gaps = 8/162 (4%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G + Q+     +      ++ +  K  PV +     G       I   +      
Sbjct: 444 RGVEIGQVFQLGLKYSNALGLKVLDQNG-KTVPVWMGSYGIGVSRVMACIAETHHDEKGL 502

Query: 548 LWLS---PIQAIVTTITSSAVEY--AQEIANLLKSHHLSIETDFRNE-TINYKIREHSIK 601
            W +   P Q  V      A  +  A+++   L++  + +  D R + +   K ++  + 
Sbjct: 503 AWPAIIAPAQVHVVATGKDAAAFEAAEQLIADLEAKGIEVIFDDRKKVSPGVKFKDAELI 562

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +P+I + G    +  +I +R       + V + DA  ++  
Sbjct: 563 GVPLIAVAGRDTVNNGTIEVRDRNGENAEAVPVADAARVIAD 604


>gi|315635814|ref|ZP_07891076.1| proline--tRNA ligase [Arcobacter butzleri JV22]
 gi|315479793|gb|EFU70464.1| proline--tRNA ligase [Arcobacter butzleri JV22]
          Length = 568

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 46/221 (20%), Positives = 86/221 (38%), Gaps = 11/221 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  +        ++    H+ L R      IA+ G+G+  +   G  + + + + ++ 
Sbjct: 3   FSKMFIPTTKETPNDATLPSHQYLVRGG---FIAQTGAGIYDFMPLGKIVLEKIRTIVKE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E+    V    LWQ+SG   +  A M   K   +       F L P N    
Sbjct: 60  EMDEAGANEVQFGFVTPLTLWQESGRATTMGAEMLRFKDRKNG-----EFVLSPTNEEAV 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           V +  + + SY++LP+ L +  + +R+E      GLMR R F   D + F + E+     
Sbjct: 115 VNMVKNRITSYKDLPLHLYQINTKFRDEARPRF-GLMRGREFLMKDGYSFHSSEEDLVRE 173

Query: 405 LKIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
             +       IY   G +  +V   +      GS      A
Sbjct: 174 FNLMEATYKKIYTKLGLDFRVVAADSGAIGGSGSKEFHVIA 214



 Score = 78.7 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 65/169 (38%), Gaps = 12/169 (7%)

Query: 484 KDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-N 541
           K +  +  + G I Q+     S  NA +++ +  K  P ++     G   R +  +IE N
Sbjct: 400 KLSYRKGIEAGHIFQLGTKYSSAMNANFLDENG-KAKPFIMGCYGIGVS-RLVAAVIEQN 457

Query: 542 FKGNLPLWL---SPIQAIVTTITSSAVEYAQ---EIANLLKSHHLSIETDFR-NETINYK 594
                 +W    +P    +    S   E A+   E+ + LK   +S   D R N    +K
Sbjct: 458 HDDKGCVWTKATAPFMVDIIVSNSKKEEEAKVGEELYSKLKQAGISTILDDRINARFGFK 517

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           + +  +   P  ++ G K   +  + I    +     + + + I  + +
Sbjct: 518 MSDFELLGFPYAVVIGKK-LEDGLVEIVDRKTLEKIDLKVDEVISKILE 565


>gi|91204601|emb|CAJ70829.1| strongly similar to prolyl-tRNA synthetase [Candidatus Kuenenia
           stuttgartiensis]
          Length = 576

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 39/218 (17%), Positives = 87/218 (39%), Gaps = 12/218 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  +        E+E   H+ + R   +  I    SG   +   G  +   +I+ +R 
Sbjct: 3   WSQTLIPTLKESPSEAEIDSHKLMIRAGLIRRI---TSGAYAYLPLGTLVLNKVIAIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P +    L ++SG  D + A++   +      +  +   L P +    
Sbjct: 60  EMNRSGAIEVFLPALQHLDLLKESGRLDVFGADLITFQD-----RHGKETVLSPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + + SY++LP+ L +  + +R+E       L R + F   DA+ F   E+  N  
Sbjct: 115 TYIVKNEINSYKQLPITLYQIQTKFRDEMRPRFGVL-RSKEFIMKDAYSFDLDEKGLNNS 173

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWD 442
            ++  +  +  + F   ++   ++      +G DA  +
Sbjct: 174 YQL--MYDAYCRIFDRCRLDYIIAEADSGAMGGDASHE 209



 Score = 72.9 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 55/140 (39%), Gaps = 10/140 (7%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPI 553
           +     S   A Y+++   K  P ++     G + R I  +IE          P+ L+P 
Sbjct: 412 LGTKYTSALKAHYLDADG-KEKPKVMGCYGIG-VNRIIAAIIEISHDENGIIWPMSLAPY 469

Query: 554 QAIVTTITSS---AVEYAQEIANLLKS-HHLSIETDFRNETINYKIREHSIKKIPIIIIC 609
             I+  +       ++ A+ I + + +   + +  D R+     K ++  +  IP+ II 
Sbjct: 470 HVIIIPVNVKDTICMDAARSIYDDMTNMKGIDVLLDDRDLRPGVKFKDADLIGIPVKIII 529

Query: 610 GDKEASERSIGIRRFGSTTT 629
           G K    + + I+   S   
Sbjct: 530 GKKYTETKELEIKLRKSGEV 549


>gi|227514714|ref|ZP_03944763.1| proline--tRNA ligase [Lactobacillus fermentum ATCC 14931]
 gi|227086918|gb|EEI22230.1| proline--tRNA ligase [Lactobacillus fermentum ATCC 14931]
          Length = 581

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 52/317 (16%), Positives = 119/317 (37%), Gaps = 22/317 (6%)

Query: 216 MLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKI 275
           M  +       +Q  +        ++E   H+ + R   ++ ++    GV  +    +++
Sbjct: 1   MKKKENRFMKQSQMLIPTQKEAPADAEVLSHKMMVRAGYIYQVSA---GVWAYLPLAYRV 57

Query: 276 FQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
            + +   +R ++      E+  P +L   LW++SG +++Y  N+F +K      +  R F
Sbjct: 58  IRKIEQIIREEMDKAGAVEMLLPGLLPADLWKESGRYEAYGDNLFKLKD-----RRERDF 112

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
            L P +     ++    + SY++LP+ + +    YR+E     +G++R + F   D + F
Sbjct: 113 ILGPTHEETVTSILRDAIHSYKKLPLVVYQLQDKYRDEDRPR-YGILRGKEFEMLDGYSF 171

Query: 395 CTKEQMFNECLKIH-NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
              +   ++   +      +I+   G +  ++   +       S      A  I + V+ 
Sbjct: 172 SADQAGLDQAYDLQAKAYRNIFDRIGLDYKVILADSGTMGGKNSQEFSAPA-AIGEDVIA 230

Query: 454 TIKNSSQDRIN-------TGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF 506
                    +            +GE A    K       A   D    ++ ++ +   + 
Sbjct: 231 YTDGDYAANLEKATTKFTPTKQIGEEAELTKK---ATPGAHTVDEAAESLGLEASQILKS 287

Query: 507 NAFYVNSHSEKCHPVMI 523
             F      E+  PVM+
Sbjct: 288 MVFLAKFEGEELKPVMV 304



 Score = 82.5 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 40/189 (21%), Positives = 71/189 (37%), Gaps = 16/189 (8%)

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
            V  GE A  G   ++     IG  ++ GT     +    F A  ++ +  +  P+++  
Sbjct: 398 TVQEGETAPDGLPIKFTNGIEIGHIFKLGT-----HYSEVFGATVLDQNG-RDVPMIMGC 451

Query: 526 AVFGSIERFIGIMIENFKGNLPLWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHH 579
              G       I  +N   N  +W    +P    V  +       +  A+EI   L+   
Sbjct: 452 YGIGVSRLLSAISEQNADENGLVWPQAVAPFDIHVIPVNAKKEDQMAMAEEITANLEEAG 511

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA-- 637
             +  D R E    K  +  +  +PI +  G K A E  + I+   +  T +V   +   
Sbjct: 512 YEVLVDDRKERAGVKFADADLIGVPIRVTVGKK-AGEGIVEIKIRKTGETLEVHKEELAT 570

Query: 638 -IPILTKES 645
            I IL K++
Sbjct: 571 NIAILLKQT 579


>gi|260662303|ref|ZP_05863199.1| prolyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN]
 gi|260553686|gb|EEX26578.1| prolyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN]
          Length = 573

 Score =  126 bits (315), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 53/306 (17%), Positives = 117/306 (38%), Gaps = 22/306 (7%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  +        ++E   H+ + R   ++ ++    GV  +    +++ + +   +R +
Sbjct: 4   SQMLIPTQKEAPADAEVLSHKMMVRAGYIYQVSA---GVWAYLPLAYRVIRKIEQIIREE 60

Query: 287 IK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      EI  P +L   LW++SG +D+Y  N+F +K      +  R F L P +     
Sbjct: 61  MDKAGAVEILLPGLLPADLWKESGRYDAYGDNLFKLKD-----RRERDFILGPTHEETVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           ++    + SY++LP+ + +    YR+E     +G++R + F   D + F   +   ++  
Sbjct: 116 SILRDAIHSYKKLPLVVYQLQDKYRDEDRPR-YGILRGKEFEMLDGYSFSADQAGLDQAY 174

Query: 406 KIH-NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            +      +I+   G +  ++   +       S      A  I + V+          + 
Sbjct: 175 DLQAKAYRNIFDRIGLDYKVILADSGTMGGKNSQEFSAPA-AIGEDVIAYTDGDYAANLE 233

Query: 465 -------TGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK 517
                      +GE A    K       A   D    ++ ++ +   +   F      E+
Sbjct: 234 KATTKFTPTKQIGEEAELTKK---ATPGAHTVDEAAESLGLEASQILKSMVFLAKFEGEE 290

Query: 518 CHPVMI 523
             PVM+
Sbjct: 291 LKPVMV 296



 Score = 82.9 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 40/189 (21%), Positives = 71/189 (37%), Gaps = 16/189 (8%)

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
            V  GE A  G   ++     IG  ++ GT     +    F A  ++ +  +  P+++  
Sbjct: 390 TVQEGETAPDGLPIKFTNGIEIGHIFKLGT-----HYSEVFGATVLDQNG-RDVPMIMGC 443

Query: 526 AVFGSIERFIGIMIENFKGNLPLWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHH 579
              G       I  +N   N  +W    +P    V  +       +  A+EI   L+   
Sbjct: 444 YGIGVSRLLSAISEQNADENGLVWPQAVAPFDIHVIPVNAKKEDQMAMAEEITANLEEAG 503

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA-- 637
             +  D R E    K  +  +  +PI +  G K A E  + I+   +  T +V   +   
Sbjct: 504 YEVLVDDRKERAGVKFADADLIGVPIRVTVGKK-AGEGIVEIKIRKTGETLEVHKEELAT 562

Query: 638 -IPILTKES 645
            I IL K++
Sbjct: 563 NIAILLKQT 571


>gi|302423350|ref|XP_003009505.1| bifunctional aminoacyl-tRNA synthetase [Verticillium albo-atrum
           VaMs.102]
 gi|261352651|gb|EEY15079.1| bifunctional aminoacyl-tRNA synthetase [Verticillium albo-atrum
           VaMs.102]
          Length = 535

 Score =  126 bits (315), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 69/360 (19%), Positives = 127/360 (35%), Gaps = 56/360 (15%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQH 303
            ++++  + ++     + +G          I+  +  +   KI+    EE + P  L   
Sbjct: 80  WYQEVVLKAEMVEYYNEIAGFFILRPASMYIWSAIRKWFSDKIELMGVEETSFPIFLSSK 139

Query: 304 LWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             + +  H + +   +  V  A D   ++   A++P +       ++  ++S+R+LP+RL
Sbjct: 140 SLEKEKDHVEGFAPELAWVTKAGDKDLEV-PVAVRPTSEAVMYPYYSKWIRSHRDLPLRL 198

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFE 421
            ++ SV R E        +R R F   + H    T+E    E L+I  L   +Y+     
Sbjct: 199 NQWNSVVRWEAK-QTTPFLRTREFLWQEGHTAHLTEELAGKEVLEILELYAGVYEQLLAV 257

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
            ++    T  EK  G                                     FY    E 
Sbjct: 258 PVVRGTKTENEKFAGG------------------------------------FYTTTVEG 281

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            +  + GR  Q  T        S+     V     K + + + +  +G   R IG+M+  
Sbjct: 282 YIP-SNGRGIQGATSHCLGQNFSKMFDITVEDPVNKGNHIHVWQNSWGLSTRVIGVMVMI 340

Query: 542 FKGNLPLWLSP----IQAIVTTIT----------SSAVEYAQEIANLLKSHHLSIETDFR 587
              +  L L P    IQAIV  +               E  ++I + LK   +  E+D R
Sbjct: 341 HGDDKGLVLPPRIAKIQAIVIPVGITAKLAAEDRKKLEEGVEDIRHPLKKAGVRTESDHR 400


>gi|212716449|ref|ZP_03324577.1| hypothetical protein BIFCAT_01373 [Bifidobacterium catenulatum DSM
           16992]
 gi|212660702|gb|EEB21277.1| hypothetical protein BIFCAT_01373 [Bifidobacterium catenulatum DSM
           16992]
          Length = 611

 Score =  126 bits (315), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 39/196 (19%), Positives = 76/196 (38%), Gaps = 11/196 (5%)

Query: 247 RKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLW 305
           + L R   L    +   G+  W   G  +   + + +R ++   D +E++   +L +  +
Sbjct: 28  KLLQRACYLR---KAAPGIWTWLPLGLNVLNKIENIIREEMASIDAQEVHFSGLLPREPY 84

Query: 306 QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEF 365
           + +  W+ Y  N+F +K      +    + L P +      +      SY++LPV L + 
Sbjct: 85  EATHRWEEYGDNIFRLKD-----RHEADYLLAPTHEEMFTLLVKDLYSSYKDLPVTLYQI 139

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIM 424
            + YR+E      GL+R R F   DA+ F    E +    +        I+     + + 
Sbjct: 140 QTKYRDEFRPR-AGLIRGREFIMKDAYSFTLDKEGLVKAYMDERGAYERIFNRLDLKYVP 198

Query: 425 VKLSTRPEKRVGSDAL 440
           V     P     S+  
Sbjct: 199 VHAMAGPMGGFESEEF 214



 Score = 83.3 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 63/164 (38%), Gaps = 12/164 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN- 545
           R  + G + Q+     +      ++ + +    V +    +G  + R +  + E      
Sbjct: 444 RGVEIGQVFQLGLKYSNALGLKVLDQNGKT---VPVWMGSYGIGVSRVMACIAETHHDEK 500

Query: 546 ---LPLWLSPIQAIVTTITSSAVEY--AQEIANLLKSHHLSIETDFRNE-TINYKIREHS 599
               P  ++P Q  V      A  +  A+ +   L++  + +  D R + +   K ++  
Sbjct: 501 GLAWPAIIAPAQVHVVATGKDAAAFEAAERLIAELEAKGIEVIFDDRKKVSPGVKFKDAE 560

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  +P+I + G    +  +I +R       + V + DA  ++ +
Sbjct: 561 LIGVPLIAVAGRDTVNNGTIEVRDRNGENAEAVPVADAAQMIAE 604


>gi|223985091|ref|ZP_03635187.1| hypothetical protein HOLDEFILI_02492 [Holdemania filiformis DSM
           12042]
 gi|223962913|gb|EEF67329.1| hypothetical protein HOLDEFILI_02492 [Holdemania filiformis DSM
           12042]
          Length = 539

 Score =  126 bits (315), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 46/206 (22%), Positives = 87/206 (42%), Gaps = 5/206 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEII 62
            +KL FP+ +    P   T + +A    +   +      +NGKV DL+  + + G+ E I
Sbjct: 1   MVKLRFPNQTEIEIPNGTTIAQLAAE--QENPRALAGGILNGKVHDLNYRLNKSGAFEWI 58

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T        +   + + +   AV+  +  + V I   +  G Y    +++P +  EL Q+
Sbjct: 59  TRGSLIGQMMTERTLSFLFITAVRLCFDGLDVLIEHSLAGGLYGTLIRKEPVTLAELEQV 118

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E KM+++IA+  P  ++ +S  +A   FE+     K  +L         ++Y      D 
Sbjct: 119 EAKMRDMIAKKEPIHRRVVSKAEAVAHFEALGMPDKASLLRQ-RTSAKCSIYTCAGVDDY 177

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYW 208
             G  +     + +F    KV   +W
Sbjct: 178 FYGVMLPDASWIGQFTL-RKVHQGFW 202


>gi|145537973|ref|XP_001454695.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124422466|emb|CAK87298.1| unnamed protein product [Paramecium tetraurelia]
          Length = 243

 Score =  126 bits (315), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 44/157 (28%), Positives = 81/157 (51%), Gaps = 7/157 (4%)

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQ 554
            + + + L  ++   Y +  +    PV++HRA+ GS+ER I ++ E   G  P WLSP Q
Sbjct: 6   QLHLLYFLEKKYELGYHHLKAGFARPVIVHRAILGSLERMIAVLTEQCGGKWPFWLSPKQ 65

Query: 555 AIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
            ++  +++   + A++IA  L+    ++ TD  ++T+  K+R   I+    + + G++E 
Sbjct: 66  LVLCPVSAYYKDVAEKIAARLRLEGYTVNTDESDQTLAKKVRNAQIQYYNFVGVIGEEEV 125

Query: 615 SERSIGIRR-FGSTTTQKVSLLDAIPILTK--ESLPP 648
               I +R    +T   K++    IP L K  ESL P
Sbjct: 126 KAGVIDVRDCEKNTRIGKLT----IPQLCKFFESLKP 158


>gi|152990768|ref|YP_001356490.1| prolyl-tRNA synthetase [Nitratiruptor sp. SB155-2]
 gi|166980135|sp|A6Q3S4|SYP_NITSB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|151422629|dbj|BAF70133.1| prolyl-tRNA synthetase [Nitratiruptor sp. SB155-2]
          Length = 569

 Score =  126 bits (315), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 41/223 (18%), Positives = 82/223 (36%), Gaps = 11/223 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  +       +++    H  L R      I +  SG+  +   G K+   + + ++ 
Sbjct: 3   FSKTFIPTMKENPKDAVLPSHIYLVRGG---FITQVASGIYNFLPIGKKVLDKIRAIVKE 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +E++   V    LW++SG    Y   +   K   +       F L P +    
Sbjct: 60  ELDKAGCQEVSLGFVTPCELWEESGRLGKYGKELLRFKDRKEN-----CFVLGPTHEEMM 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           V +  + + SY++LP+ L +    +R+E      GL+R R F   D + F   E+     
Sbjct: 115 VDLVRNRVTSYKQLPLNLYQINWKFRDEARPRF-GLLRGREFLMKDGYSFHADEEDMRRE 173

Query: 405 LKIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
             +      +I+   G     V+          S      AE+
Sbjct: 174 YDLMEKTYRNIFGRLGLRFRAVEADVGAIGGNASKEFMVLAES 216



 Score = 87.5 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 32/175 (18%), Positives = 65/175 (37%), Gaps = 11/175 (6%)

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
            PK   ++K   G +      Q+     +  NA +++    K  P ++     G   R +
Sbjct: 394 CPKCGAVMKLTKGIEV-GHIFQLGTRYSAAMNATFLDKDG-KAKPFVMGTYGIGVS-RLV 450

Query: 536 GIMIENFKGN----LPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRN 588
              IE          PL ++P +  +          + + +E+   LK+  + +  D R 
Sbjct: 451 AASIEQNHDERGCIWPLQIAPFEVDIIVSNIKDEEQIAFGEELYEQLKNAGVDVILDDRP 510

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           E    KI++  +   P  II G K   E ++ I +  +    ++   D    + +
Sbjct: 511 ERFGPKIKDFELIGFPYGIIVG-KGLKEGTVQIVQRETLDKVEIPKEDVFKTILE 564


>gi|332296932|ref|YP_004438854.1| Prolyl-tRNA synthetase [Treponema brennaborense DSM 12168]
 gi|332180035|gb|AEE15723.1| Prolyl-tRNA synthetase [Treponema brennaborense DSM 12168]
          Length = 615

 Score =  125 bits (314), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 48/217 (22%), Positives = 89/217 (41%), Gaps = 11/217 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  ++       E+    H+ + R   +  +   G+G+  +   G + F+ + + +R 
Sbjct: 3   TSETLISTLREVPAEAVIASHQLMLRAGLIRKL---GNGLFTYLPFGLRSFRKVENIIRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      EI    V+   LW++SG WD+  A M  +K   D     +   + P      
Sbjct: 60  EMDAIGALEIKPSVVVPGELWRESGRWDTMGAGMLRIKNRVD-----QELVVSPTAEEAV 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
            A+    L SY++LP+   +  + YR+E     +G+MR R F   DA+ F    E +   
Sbjct: 115 TALIRDELSSYKQLPIVAYQINTKYRDEIRPR-YGVMRGREFMMKDAYSFHADAESLDKT 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            L +      I+K  G   I V   +      GS+  
Sbjct: 174 YLAMEKAYKRIFKRLGLSVIPVSADSGAMGGSGSEEF 210



 Score = 86.8 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 26/141 (18%), Positives = 55/141 (39%), Gaps = 8/141 (5%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL---SPIQ 554
           + +      N  Y++ + ++  P M      G       I+ E+  GN  +W    +P Q
Sbjct: 457 LGYKYTKSMNVTYLDENGKQQVPTM-GCYGIGVDRSLASIIEEHHDGNGIVWPMSAAPYQ 515

Query: 555 AIVTTITSS--AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
            ++  +       E A  +   L+   + +  D RNE    K ++  +  IP+ I+ G+K
Sbjct: 516 VVIVPVKYEGTMKEIADSLYAELRQAGIEVLLDDRNERPGVKFKDMDLIGIPVRIVVGEK 575

Query: 613 EASERSIGIRRFGSTTTQKVS 633
                 + ++   +  +  V 
Sbjct: 576 NLPN--VELKLRSAADSDLVP 594


>gi|222874274|gb|EEF11405.1| predicted protein [Populus trichocarpa]
          Length = 191

 Score =  125 bits (314), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 82/198 (41%), Gaps = 11/198 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  ++       ++E   H+ + R   +  +   G+G+  +   G ++ + + + +R 
Sbjct: 3   ASQFFISTLKEAPADAEVVSHKLMTRAGLIKKL---GAGIYNYMPMGLRVIRKVEAIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    +W+++G ++     +  +K      +  R F ++P +    
Sbjct: 60  EMNRAGAVEVTMPVVQPAEMWEETGRFEKMGPELLRIKD-----RHGRDFVIQPTSEEVV 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
             +    LKSY++LP    +  + +R+E      GLMR R F   DA+ F    +     
Sbjct: 115 TDIARQELKSYKQLPKNFYQIQTKFRDERRPRF-GLMRGREFIMKDAYSFDKDRDTAQIS 173

Query: 404 CLKIHNLIISIYKDFGFE 421
              +      I+  FG +
Sbjct: 174 YQTMRAAYKRIFDRFGLQ 191


>gi|312128326|ref|YP_003993200.1| aaa atpase [Caldicellulosiruptor hydrothermalis 108]
 gi|311778345|gb|ADQ07831.1| AAA ATPase [Caldicellulosiruptor hydrothermalis 108]
          Length = 554

 Score =  125 bits (314), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 46/263 (17%), Positives = 95/263 (36%), Gaps = 9/263 (3%)

Query: 2   PSDIKLTFPDGSIKN-FPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
            S +++ F D ++     V                   VA  ++ ++ +L   + +   +
Sbjct: 5   SSTVRVFFEDVNVYEDVEVGTNLLSFVPRFESYFKSPIVAAKVDNEIKELKYVISKNCKV 64

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           + I       + + R S   ++  A + ++ E  V +   +  G Y + +  +  SS ++
Sbjct: 65  KFIDMTQEDGMRIYRRSLIFVLIVATRMLFKEA-VNVQHSLSKGLYCEVE-NRKLSSQDI 122

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             I++KM+ I+ +D  F ++ +S E A +LFE K    K   +      + V +Y  G++
Sbjct: 123 ELIKQKMKWIVEQDFQFRREKVSKEDAVKLFEEKGFYDKARTI-KFSENDYVYIYYCGDY 181

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNT----QQELTQYL 235
            D   G  V STG +K F  +    G                            E   + 
Sbjct: 182 VDYFYGHLVPSTGYLKIFDLIQYHDGMVLLYPDKSDPFKLQEFVENKKLFAVYHEYKNWG 241

Query: 236 YFLEESEKRDHRKLAREMDLFHI 258
             L  S   +  ++     +   
Sbjct: 242 KILGVSSIGELNEVIASGKIREF 264


>gi|326692543|ref|ZP_08229548.1| prolyl-tRNA synthetase [Leuconostoc argentinum KCTC 3773]
          Length = 571

 Score =  125 bits (314), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 45/268 (16%), Positives = 103/268 (38%), Gaps = 26/268 (9%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++E + H+ L +   +  +A    G+  +     ++   + + +R +
Sbjct: 4   SKLLMPTLREVPADAEVKSHQLLLKAGFIRPVAA---GMFAYLPLAQRVLNKIEAIIREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +   D  E+  P++L   LW++SG +++Y   ++  K      +  R F L P +     
Sbjct: 61  MDRIDANEMLVPEILPAELWEKSGRYETYGPALYKFKN-----RQARDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    +KSY++LP+ + +  + +R+E      GL+R R F   DA+ F   +   ++  
Sbjct: 116 QLMADDIKSYKKLPLIVYQLQAKFRDENRPRF-GLLRTREFIMKDAYSFSADQAGLDQAY 174

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
             H++  +    F    +  +        +G     + +             + +D I  
Sbjct: 175 --HDMEAAYTNIFDRIGLSYRAIVGDAGAMGGSDSKEFS---------APAAAGEDIIAY 223

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQC 493
                + + Y    E   KD   R    
Sbjct: 224 ----SDASDYAANLEMA-KDYYERQVST 246



 Score = 70.2 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 25/152 (16%), Positives = 56/152 (36%), Gaps = 11/152 (7%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G I  +         A  ++ +  +   +M    +   + R +  + E    +  
Sbjct: 406 RGIEIGHIFKLGTRYSKTMGAQILDENGRQIDMIMGSYGI--GVSRLLSAIAEQMADDDG 463

Query: 546 --LPLWLSPIQAIVTTITSSAVEYAQ---EIANLLKSHHLSIETDFRNETINYKIREHSI 600
              P  ++P    +  +     + A+   ++   L +  L +  D R E    K  +  +
Sbjct: 464 LVWPASVAPFDVHIVPVNLKDEDQARITSQLEAELTAQGLDVLVDDRKERAGVKFADADL 523

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
             +PI I  G K A+E  + ++   S T  ++
Sbjct: 524 IGLPIRITVGKK-AAEDVVEVKVRASNTNIEM 554


>gi|291059576|gb|ADD72311.1| prolyl-tRNA synthetase [Treponema pallidum subsp. pallidum str.
           Chicago]
          Length = 619

 Score =  125 bits (314), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 45/198 (22%), Positives = 74/198 (37%), Gaps = 11/198 (5%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
            H+ L R   +  IA   +G+  +   G ++   + + +R +++     E   P V    
Sbjct: 22  SHQLLMRAGYVRKIA---NGLFAYLPLGLRVRHKIEAIIREELEAIGCLECTAPVVTPAE 78

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SG W    A +   K   D           P       A+      SY+  P+ L 
Sbjct: 79  LWKESGRWYRMGAELLRAKNRLDH-----ELLFSPTAEESFTALVRGDCTSYKHFPLSLY 133

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFEK 422
           +  + YR+E     +GLMR R FT  DA+ F T          K  +   +I++  G   
Sbjct: 134 QINAKYRDEIRPR-YGLMRAREFTMADAYSFHTDCACLARTYEKFAHAYRAIFRRIGLSV 192

Query: 423 IMVKLSTRPEKRVGSDAL 440
           I V           S+  
Sbjct: 193 IAVHAHLGAMGGQESEEF 210



 Score = 67.5 bits (163), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 20/121 (16%), Positives = 47/121 (38%), Gaps = 8/121 (6%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPI 553
           +        +  + +    +  P+M    +   ++R +  ++EN         PL +SP 
Sbjct: 461 LGDKYTRSMHLTFTDEQGVRQFPLMGCYGI--GLDRTLASVVENHHDTRGISWPLAISPY 518

Query: 554 QAIVTTITSSAVEYA--QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
             ++  I  +   YA  + +   L++  + +  D R E    K  +  +  IP+ ++   
Sbjct: 519 AVVLIPIPHTQAPYAAAEALYVQLRTRGVEVLFDDRAERPGVKFADADLIGIPLRVVLSA 578

Query: 612 K 612
           K
Sbjct: 579 K 579


>gi|15639153|ref|NP_218599.1| prolyl-tRNA synthetase [Treponema pallidum subsp. pallidum str.
           Nichols]
 gi|189025393|ref|YP_001933165.1| prolyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14]
 gi|6094411|sp|O83195|SYP_TREPA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226701353|sp|B2S2A7|SYP_TREPS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|3322426|gb|AAC65149.1| prolyl-tRNA synthetase (proS) [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189017968|gb|ACD70586.1| prolyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14]
          Length = 617

 Score =  125 bits (314), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 45/198 (22%), Positives = 74/198 (37%), Gaps = 11/198 (5%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
            H+ L R   +  IA   +G+  +   G ++   + + +R +++     E   P V    
Sbjct: 20  SHQLLMRAGYVRKIA---NGLFAYLPLGLRVRHKIEAIIREELEAIGCLECTAPVVTPAE 76

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW++SG W    A +   K   D           P       A+      SY+  P+ L 
Sbjct: 77  LWKESGRWYRMGAELLRAKNRLDH-----ELLFSPTAEESFTALVRGDCTSYKHFPLSLY 131

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFEK 422
           +  + YR+E     +GLMR R FT  DA+ F T          K  +   +I++  G   
Sbjct: 132 QINAKYRDEIRPR-YGLMRAREFTMADAYSFHTDCACLARTYEKFAHAYRAIFRRIGLSV 190

Query: 423 IMVKLSTRPEKRVGSDAL 440
           I V           S+  
Sbjct: 191 IAVHAHLGAMGGQESEEF 208



 Score = 67.5 bits (163), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 20/121 (16%), Positives = 47/121 (38%), Gaps = 8/121 (6%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPI 553
           +        +  + +    +  P+M    +   ++R +  ++EN         PL +SP 
Sbjct: 459 LGDKYTRSMHLTFTDEQGVRQFPLMGCYGI--GLDRTLASVVENHHDTRGISWPLAISPY 516

Query: 554 QAIVTTITSSAVEYA--QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
             ++  I  +   YA  + +   L++  + +  D R E    K  +  +  IP+ ++   
Sbjct: 517 AVVLIPIPHTQAPYAAAEALYVQLRTRGVEVLFDDRAERPGVKFADADLIGIPLRVVLSA 576

Query: 612 K 612
           K
Sbjct: 577 K 577


>gi|332637693|ref|ZP_08416556.1| prolyl-tRNA synthetase [Weissella cibaria KACC 11862]
          Length = 573

 Score =  125 bits (314), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 44/222 (19%), Positives = 93/222 (41%), Gaps = 11/222 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++E   H+ + R   +  ++    GV  +     ++   + + +R +
Sbjct: 4   SKVFIPTLRETPADAEVISHQMMLRAGYMRPVSA---GVYAYLPLAQRVLNKINAIIREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++  D  E++ P +L   +WQ+SG +++Y  N+F +K   D     R   L P +     
Sbjct: 61  MEKIDAIEMSAPMLLPAEMWQESGRYETYGPNLFKLKNRHD-----RDMILGPTHEETMT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    +KSY+ LP+ + +  + +R+E       L R R F   DA+ F   +   +E  
Sbjct: 116 TLIRDDIKSYKRLPLTVYQIQTKFRDENRPRFGVL-RGREFIMKDAYSFSVDQDGLDESY 174

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
           K + +  I+I+   G +  ++           S      AE 
Sbjct: 175 KNMESAYINIFDRIGLDYRVIVGDAGAMGGSDSKEFSAPAEA 216



 Score = 69.4 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 20/152 (13%), Positives = 51/152 (33%), Gaps = 10/152 (6%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPI 553
           +         A  ++++  +   +M    +   + R +  + E          P  ++P 
Sbjct: 414 LGTRYSKSMGAQVLDANGRQADVIMGSYGI--GVSRLLAAIAEQNADENGLAWPTSVAPW 471

Query: 554 QAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
              +  +     +      E+ + L      +  D RNE    K  +  +  +P+ +  G
Sbjct: 472 DVHLVPMKYSDETQRALTDELNDKLVEAGYEVLVDDRNERAGVKFNDSDLIGLPVRVTIG 531

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            K A E  + ++   +    +V   + +  L 
Sbjct: 532 KK-AGEGIVEVKLRKADEAIEVRTEELVSTLQ 562


>gi|321472321|gb|EFX83291.1| hypothetical protein DAPPUDRAFT_127919 [Daphnia pulex]
          Length = 406

 Score =  125 bits (314), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 64/391 (16%), Positives = 136/391 (34%), Gaps = 60/391 (15%)

Query: 253 MDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHW 311
            ++  + ++  G+      G +  + L+  +  ++K    +++  P +   +LW+ +G W
Sbjct: 9   NEMGIVRQNSPGLFTLTPLGVRSLEKLVKIVDDELKYVGCQKLQLPILTAGNLWKTTGRW 68

Query: 312 DSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYR 370
           +S  + +  +K      +  R + L P +            + ++++LP++L +  S +R
Sbjct: 69  ESTGSELLTIKD-----RHARDYVLSPTHEEAITDFVASLPQLTHKQLPLKLYQITSKFR 123

Query: 371 NEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF------------ 418
           +E      GL+R R FT  D + F    +  +E   +     +                 
Sbjct: 124 DEIKPRF-GLLRGREFTMKDLYTFDKTVEAAHETYDLICTAYNRIFQRLNVPFVKVVGST 182

Query: 419 GFEKIMVKLSTRPEKRVGSDALW--------DDAENIMKGVLDTIKNSSQDRINTGVLLG 470
           G    +          +G D L          +AE     V     +  +     G+ + 
Sbjct: 183 GNIGGLSSHEYHFPSSIGEDDLKICSACNSGSNAEIATTDVCSKCGSPVKQ--TKGIEVA 240

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
                G K+  IL      +    ++                     C+ + I R +  S
Sbjct: 241 HTFLLGTKYSQILNALFSAEDGSRSVCQ-----------------MGCYGIGISRILAAS 283

Query: 531 IERFIGIMIENFKGNLPLWLSPIQA-IVTTITSSAVEYAQEIANLLKSH-------HLSI 582
           +E    ++  + +   P  ++P    +V     S  E A ++A+ L +           +
Sbjct: 284 VE----VLGTDSEIRWPKLIAPYSVCVVAPKGGSKEESAIQLAHFLANQIDQIQPFMQDV 339

Query: 583 ETDFR-NETINYKIREHSIKKIPIIIICGDK 612
             D R   T+  K+ E      P II+ G K
Sbjct: 340 ILDDRMTTTVGKKLMEAKRVGYPYIIVVGKK 370


>gi|224368341|ref|YP_002602504.1| prolyl-tRNA synthetase [Desulfobacterium autotrophicum HRM2]
 gi|223691057|gb|ACN14340.1| ProS [Desulfobacterium autotrophicum HRM2]
          Length = 504

 Score =  125 bits (314), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 66/443 (14%), Positives = 141/443 (31%), Gaps = 72/443 (16%)

Query: 228 QQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI 287
           +Q         +E     ++++ +  ++   +     ++     G+ +++ ++S M    
Sbjct: 3   KQAKNAISPTRDEDYPMWYQEVVKASEMAEKSPVRGCMVI-KPWGYALWENIVSTMDGMF 61

Query: 288 KD-DYEEINTPQVLD-QHLWQQSGHWDSYRANMFAVKCADDTIKDL----------RTFA 335
           KD   +    P  +   +L +++ H + +      V        +               
Sbjct: 62  KDTGIKNAYFPLFIPLSYLEKEAEHVEGFAKECAVVTHHRLEAGEDGKLVPAGKLTEPLI 121

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC 395
           ++P +        +    SYR+LP+ L ++ +V R E        +R   F   + H   
Sbjct: 122 VRPTSETIIGESMSRWTSSYRDLPILLNQWANVVRWEMR--TRIFLRTSEFLWQEGHTAH 179

Query: 396 TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTI 455
             E    E      +++ +Y  F                                V + +
Sbjct: 180 ATEAEARERT---MMMLDVYTRF--------------------------------VEEYL 204

Query: 456 KNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS 515
                    T      GA      E +++D   +  Q GT        +R +       +
Sbjct: 205 AMPVVRGRKTASERFPGAVDTVCIEAMMQD--KKALQAGTSHFLGQNFARSSDIRFQ--N 260

Query: 516 EKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTIT------SSAV 565
                       +G+  R IG MI     +    +P  ++P   ++  I          +
Sbjct: 261 ADKKEEFAWTTSWGTSTRMIGGMIMTHADDDGVIMPPRVAPAHVVLLPIARKEEDQRKVM 320

Query: 566 EYAQEIANLL-----KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
           EY + +A+ L         + +E D R+ T   +  +   K IP+    G ++     + 
Sbjct: 321 EYTRSLADALAVRTYHGSRIRVEIDDRD-TGGARAWDWIKKGIPLRAEIGPRDMENDCVF 379

Query: 621 IRRFGSTTTQKVSL--LDAIPIL 641
           + R      +KVSL   D I  +
Sbjct: 380 LGRRDEAPGKKVSLPREDFINTI 402


>gi|167589833|ref|ZP_02382221.1| prolyl-tRNA synthetase [Burkholderia ubonensis Bu]
          Length = 382

 Score =  125 bits (314), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 65/394 (16%), Positives = 127/394 (32%), Gaps = 61/394 (15%)

Query: 256 FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSY 314
               +D +G+  W   G +  + +   +R ++    + E+    + D  LW+QSG  D Y
Sbjct: 30  CFFHQDAAGLYSWMSLGLRAQRCVERVVRDEMDRAGFCEVQMSLLQDADLWRQSGRLDIY 89

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
              +  +     T +  R F L          +      +  +L + L +FG+ YR+E  
Sbjct: 90  GDELMRL-----TNRAGRLFCLGATCEELAANMVRTHY-NRTDLSLGLYQFGNKYRDELR 143

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
            +  GL+R R F   DA+ F   +       +         + FG   +     +     
Sbjct: 144 -TRGGLVRAREFIMKDAYAFHATDDGARAAYETVRDAYR--RIFGRLGLDAIAKSGDNGE 200

Query: 435 VG---SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDW 491
           +G   S+     +E                    G    +G                R  
Sbjct: 201 IGGRSSEEFHVVSE-------------------LGEDEADG---------------RRSL 226

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGNLPLW- 549
           +C  I  D           VN+  E      +    FG  I R + ++++  +     W 
Sbjct: 227 ECAHI-FDLGDRYSKVLGLVNAKGE-----FVRMGCFGVGISRLVMLLLDRQRDGRGFWG 280

Query: 550 ---LSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
               +    ++T I     +  + AQ +   L++  +S+  D R      K+ +  +   
Sbjct: 281 SDAFNTFDVVLTVIDWERQACQDAAQRLQRDLQAAGISVLVDDRVVQAGKKLADAELIAC 340

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
              ++   K  +          +   + VS  D 
Sbjct: 341 RQRVVVSRKAIASGRFEWMDRRTLACESVSAEDL 374


>gi|87199967|ref|YP_497224.1| prolyl-tRNA synthetase [Novosphingobium aromaticivorans DSM 12444]
 gi|114152224|sp|Q2G6Y3|SYP_NOVAD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|87135648|gb|ABD26390.1| prolyl-tRNA synthetase [Novosphingobium aromaticivorans DSM 12444]
          Length = 515

 Score =  125 bits (314), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 62/385 (16%), Positives = 128/385 (33%), Gaps = 70/385 (18%)

Query: 270 RKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAVKC---- 323
             G+ I++ +   M  +IK+   E    P  +    + +++ H + +   M  V      
Sbjct: 45  PWGYGIWERIQKLMDAEIKEAGVENCYFPLFIPLSYFTKEAEHVEGFAKEMAVVTHHRLI 104

Query: 324 --------ADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
                    D   K      ++P +     A  +  ++S+R+LP+   ++ +V R E   
Sbjct: 105 SDGKGGLTPDPEAKLEEPLVVRPTSETVIGAAMSRWIQSWRDLPLLTNQWANVVRWEMR- 163

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
                +R   F   + H     E       K     + +Y+ F                 
Sbjct: 164 -TRMFLRTSEFLWQEGHTAHVDEADAM---KETLRALEMYRAF----------------- 202

Query: 436 GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGT 495
                   AE  +   +        +R         GA      E +++D  G+  Q GT
Sbjct: 203 --------AEGPLAMPVIAGPKPENERFP-------GAVETFSIEAMMQD--GKALQAGT 245

Query: 496 IQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLS 551
                   ++  A  +   +++    + H   +G   R IG +I    ++    +P  ++
Sbjct: 246 SHYLGTTFAK--AAGIQYQNKEGQQALAHTTSWGVSTRLIGGVIMTHGDDDGLRVPPQVA 303

Query: 552 PIQAIVTTI------TSSAVEYAQEIANLLKS-----HHLSIETDFRNETINYKIREHSI 600
           P Q ++  +        + + Y +EI   L         + +  D R      K      
Sbjct: 304 PQQIVILPMLRDNEGDDALLAYCEEIRASLVKLSVFGERIRVLLDKRPGKATQKRWAWVK 363

Query: 601 KKIPIIIICGDKEASERSIGIRRFG 625
           K +P+I+  G ++A    + + R  
Sbjct: 364 KGMPLILEIGGRDAEGGLVSVLRRD 388


>gi|330718639|ref|ZP_08313239.1| prolyl-tRNA synthetase [Leuconostoc fallax KCTC 3537]
          Length = 572

 Score =  125 bits (314), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 40/216 (18%), Positives = 89/216 (41%), Gaps = 11/216 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++E R H  L +   +  +A    G+  +     ++   + + +R +
Sbjct: 4   SKLLMPTLREVPADAEVRSHALLLKAGYIRPVAA---GMFSYLPLAQRVLNKIEAIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +   D  E++ P++L   LWQ+SG + +Y   ++  K      +  R F L P +     
Sbjct: 61  MAKIDANEMSVPEILPAELWQESGRYATYGPALYKFKN-----RQNRDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    +KSY++LP+ + +  + +R+E      GL+R R F   DA+ F   ++  ++  
Sbjct: 116 QLMRDDIKSYKKLPLLVYQIQAKFRDENRPRF-GLLRTREFIMKDAYSFSADQEGLDDAY 174

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           + +     +I+   G     +           S   
Sbjct: 175 RAMEQAYTNIFDRVGLTYRAIVGDAGAMGGSDSKEF 210



 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 24/152 (15%), Positives = 54/152 (35%), Gaps = 10/152 (6%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPI 553
           +         A  ++ +  +   +M    +   I R +  + E          P  ++P 
Sbjct: 417 LGTRYSEALGAQVLDKNGRQTDMIMGSYGI--GISRLLSAISEQKADEDGLVWPTSVAPF 474

Query: 554 QAIVTTITSSAVEYAQ---EIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
              +  I     E A+   ++ +   +  L +  D R E    K  +  +  +PI I  G
Sbjct: 475 DVHIVPINLKDTEQARVTRQLESEFLAQGLEVLVDDRKERAGVKFADADLIGLPIRITVG 534

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            K A E  + ++   S T  ++ + + +  + 
Sbjct: 535 KK-AEEDIVEVKVRASNTNIEMRVSEVVDSVA 565


>gi|227486766|ref|ZP_03917082.1| proline--tRNA ligase [Anaerococcus lactolyticus ATCC 51172]
 gi|227235236|gb|EEI85251.1| proline--tRNA ligase [Anaerococcus lactolyticus ATCC 51172]
          Length = 563

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 45/213 (21%), Positives = 83/213 (38%), Gaps = 12/213 (5%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-D 289
           +        ++E   H+ L R      I +  SG+  +   G K+   + + +R  +   
Sbjct: 1   MPTLREDPVDAETASHKLLVRGA---FIRQQASGIYSFLPLGKKVLNKIEAIVRDAMDSY 57

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
              E+ T  +  + +W +S  W+++   MF +K      +  R +AL P      V +  
Sbjct: 58  GAIEVATSILQPRQIWDKSTRWETFGPEMFKLKD-----RHEREYALGPTAEEAFVDLIK 112

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
             L SY++LPV L +    +R+E      G+ R R F   DA+ F   +    +     N
Sbjct: 113 DELNSYKQLPVNLYQIVDKFRDEKRPRF-GINRSRDFLMKDAYTFDEDQAGLEKAY--MN 169

Query: 410 LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWD 442
           +  S    F   K+  K+       +G     +
Sbjct: 170 MWESYEYAFDKMKLDYKIVEGDTGAMGGHKSHE 202



 Score = 80.2 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 69/189 (36%), Gaps = 13/189 (6%)

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
            G+ AF G       K A G +      Q+        +A +++ +    +  M    + 
Sbjct: 381 EGDQAFDG---SGTYKSARGIEV-GNIFQLGTKYSKALDATFLDQNGVSKYFEMGSYGI- 435

Query: 529 GSIERFIGIMIENFKGNLPLWL---SPIQAIVT---TITSSAVEYAQEIANLLKSHHLSI 582
           G       I+ +       +W    +P + I+T          + A++I   LK+  + +
Sbjct: 436 GISRSISAIVEQYHDDKGIIWPTSVAPFEVIITLIKPNDEDQAKLAEDIYKKLKARRIDV 495

Query: 583 ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             D R E    K  +  +  IP  I  G K+A +  +          + +   +AI ++ 
Sbjct: 496 VLDDRKERPGVKFNDRDLIGIPYRITVG-KDAKDSIVEYSTRAEMENKNIDANEAINLVC 554

Query: 643 KESLPPDCQ 651
            E++  D +
Sbjct: 555 -ENIQKDLE 562


>gi|225166271|ref|ZP_03727968.1| Proline--tRNA ligase [Opitutaceae bacterium TAV2]
 gi|224799484|gb|EEG18016.1| Proline--tRNA ligase [Opitutaceae bacterium TAV2]
          Length = 302

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 48/224 (21%), Positives = 81/224 (36%), Gaps = 8/224 (3%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  +        ++E   H+ L R   +  ++    G+  +   G +    +    R 
Sbjct: 4   WSQYFIPTLKESPADAEIASHKLLVRAGLVRKLS---GGLYTFMPLGLRALHKISQICRE 60

Query: 286 KIKDDY-EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR--TFALKPMNCP 342
           +I      E+  P +    LW+Q   W + R  MF    A D  +  R   F L P +  
Sbjct: 61  EIDAGGGIELWMPHLHPAELWEQGPRWAAAREIMFRADSAGDGKRAPRDPEFVLGPTHEE 120

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN 402
               +    + SYR+LP    +  + +RNE     +GLMR R F   DA+ F   +    
Sbjct: 121 IITPLVKSEISSYRDLPKNFYQIATKFRNEIRPR-YGLMRAREFVMMDAYSFDVDDDSAV 179

Query: 403 ECL-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
           +    +       +   G + I V+  T       S      AE
Sbjct: 180 KAYFAMKTAYEKFFARLGVQAIAVEADTGVMGGSYSHEFMVPAE 223


>gi|222823773|ref|YP_002575347.1| prolyl-tRNA synthetase [Campylobacter lari RM2100]
 gi|254782892|sp|B9KGB1|SYP_CAMLR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|222538995|gb|ACM64096.1| prolyl-tRNA synthetase [Campylobacter lari RM2100]
          Length = 565

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 44/229 (19%), Positives = 89/229 (38%), Gaps = 11/229 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++          +++    H  L +      I + GSG+  +   G ++   + + ++ 
Sbjct: 3   FSKFYAISTKENPKDATLPSHIFLVKGA---FIEQIGSGLYNFLPLGKRVLDKIKNIIKE 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+N        LW++SG ++ +   +   K   +       F L P +    
Sbjct: 60  EMDKAGALEVNLSFNTPAELWKESGRFNVFGKELLRFKDRKEN-----DFVLGPTHEEAM 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           VA+  + + SY++LP+ L + G  +R+E      GL+R R F   D + F   E   ++ 
Sbjct: 115 VALIRNKITSYKQLPLHLYQIGLKFRDEARPRF-GLLRCREFLMKDGYSFHASEADLDKE 173

Query: 405 LK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
              +H     I    G +   V+  +      GS      A+N    +L
Sbjct: 174 FNLMHETYSKILTRLGLDFRAVEADSGAIGGSGSKEFMVLAKNGEDDIL 222



 Score = 65.6 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 35/175 (20%), Positives = 61/175 (34%), Gaps = 13/175 (7%)

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
            PK ++ LK + G +   G I       S+         + K     +     G   R +
Sbjct: 395 CPKCQHKLKQSKGIE--VGHIFKLGKKYSQAMNASYLDENGKAQFFTMGCYGMGVS-RLV 451

Query: 536 GIMIE-NFKGNLPLW---LSPIQAIVTTITSS---AVEYAQEIANLLKSHHLSIETDFRN 588
            + IE +      +W   L+P    +         A+E+A++I    K     I  D RN
Sbjct: 452 AVAIEASHDEKGCIWNKTLAPFVLDIIVSNIKDIKAMEFAEQIYTHFKDK--EILFDDRN 509

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           E    KI +  +   P  ++ G K      + +    +   Q +   + I  L K
Sbjct: 510 ERFGVKINDFELMGFPYALVIG-KSLENDEVELIHRNTLEKQVLKTQEVISHLEK 563


>gi|229491433|ref|ZP_04385257.1| prolyl-tRNA synthetase [Rhodococcus erythropolis SK121]
 gi|229321718|gb|EEN87515.1| prolyl-tRNA synthetase [Rhodococcus erythropolis SK121]
          Length = 581

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 65/361 (18%), Positives = 134/361 (37%), Gaps = 26/361 (7%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
            ++E   H+ L R   +  IA    GV  W   G ++ + +   +R ++     +EI  P
Sbjct: 18  SDAEVASHKLLVRAGYVRRIA---PGVYSWLPLGLRVLREVERVVREEMNAIGGQEILLP 74

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +L +  ++ S  W  Y  N+F +K      +    + L P +             SY++
Sbjct: 75  ALLPRDPYEASNRWTEYGPNLFRLKD-----RKGNDYMLGPTHEELFALTVKGEYNSYKD 129

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYK 416
            PV L +  + YR+E      G++R R F   D++ F   ++   E  + H      I+ 
Sbjct: 130 FPVTLYQVQTKYRDEERPR-AGILRGREFLMKDSYSFDLTDEGLTESYQAHRGAYEKIFT 188

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN--TGVLLGEGAF 474
             G + ++V  ++       S+    ++E      +  +++     +     V+     F
Sbjct: 189 RLGVKYVIVSATSGAMGGSASEEFLAESEIGEDTYVRCLESGYAANVEAVKTVVPDSIPF 248

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
            G   E  + D         TI    +  +  +     + ++    +M+   + G     
Sbjct: 249 DGL-PEAKVYDTAN----TPTIDTLVDWANGADLGRTVTAADTLKNIMVKTRLPGGEWEL 303

Query: 535 IGIMI----ENFKGNLPLWLSPIQAIVTTITS-SAVEYAQEIA---NLLKSHHLSIETDF 586
           +GI I    E  +  L   L P + ++ T T      +  +       L+++ +    D 
Sbjct: 304 LGIGIPGDREVDEKRLEASLEPAEFVMITETDFKNNPFLAKGYIGPKALQANGVRYLVDP 363

Query: 587 R 587
           R
Sbjct: 364 R 364



 Score = 82.1 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 63/160 (39%), Gaps = 10/160 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G + Q+       F    +  + +   P M    V   + R + ++ E       
Sbjct: 419 RGIEIGHVFQLGRKYTDVFTVDVLAENGKPVRPTMGSYGV--GVSRLVAVIAEQHHDEKG 476

Query: 548 L-WLSPIQA-----IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           L W + +       ++     +A E A+ +A  L    L +  D R  +   K ++  + 
Sbjct: 477 LRWPAEVSPADVYLVIANKDETAREGAEGLAAQLDRAGLEVILDDRKASPGVKFKDSELI 536

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            +P+I++ G +  ++  + IR   +  ++++    AI  +
Sbjct: 537 GVPLIVVVG-RGWADGKVEIRDRFTGESREIDANSAIEEI 575


>gi|15605873|ref|NP_213250.1| prolyl-tRNA synthetase [Aquifex aeolicus VF5]
 gi|81816424|sp|O66690|SYP_AQUAE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|2983039|gb|AAC06648.1| proline-tRNA synthetase [Aquifex aeolicus VF5]
          Length = 570

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 36/174 (20%), Positives = 76/174 (43%), Gaps = 10/174 (5%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
            HR L +   +  ++    G+       +K+ + + S +R+++     +E+    +  + 
Sbjct: 22  SHRLLLKAGFIKQVSA---GIYELLPPAYKVLKKVESIIRKEMDRSGAQELLLTVLNPKE 78

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++G W++Y   +F +K      ++ R + L P +      +    ++SYR+LPV L 
Sbjct: 79  LWEETGRWETYGEELFKLKD-----RNGREYCLGPTHEEEITDLVRRVVRSYRQLPVILY 133

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           +    +R+E      GL+R R F   DA+ F T +       +          +
Sbjct: 134 QIQVKFRDEKRPRF-GLIRAREFIMKDAYSFDTDDMSAMISYEAMKFAYQRIFN 186



 Score = 92.9 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 45/236 (19%), Positives = 86/236 (36%), Gaps = 34/236 (14%)

Query: 440 LWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG--------------PKFEYILKD 485
           LWD++   +K ++  +       IN  V  G    YG              PK    LK 
Sbjct: 345 LWDNSLYGVKNLVVALNEPDWHYIN--VNPGRDFQYGEFVDVAEVREGDPCPKCGSPLK- 401

Query: 486 AIGRDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
            + R  + G I +          A++ +    K  P+++     G   R +  ++E +  
Sbjct: 402 -VRRGLELGHIFLLGTRYSEPMKAYFTDRDG-KEKPIIMGCYGIGVS-RILAALVEQYHD 458

Query: 545 NLPL-WLSPIQA----IVTTITSSAVEYAQEIANLL----KSHHLSIETDFRNETINYKI 595
           +  + W +P+      I+   T    E  + +A  L    +   + +  D R E+  +K 
Sbjct: 459 DKGIKWPTPVAPFELDIILLNTKD--EEMKNVAEKLYLEAEEKGIDVIFDDREESPGFKF 516

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
            +  +   P  I+ G K   E  + ++   +     V +  AI    KE +  D +
Sbjct: 517 ADADLVGFPYRIVVGKK-VKEGKVEVQSRHTGEKWDVEIEKAID-FVKEKIEEDKK 570


>gi|315638151|ref|ZP_07893333.1| proline--tRNA ligase [Campylobacter upsaliensis JV21]
 gi|315481687|gb|EFU72309.1| proline--tRNA ligase [Campylobacter upsaliensis JV21]
          Length = 568

 Score =  125 bits (313), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 47/241 (19%), Positives = 91/241 (37%), Gaps = 11/241 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q     +    +++    H  L R      I ++GSG+  +   G  ++  + S ++ 
Sbjct: 3   FSQFYAPTFKEAPKDATLPSHIFLTRAG---FIEQNGSGLYNFLPLGKMVYSKIESIIKE 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E +         W++SG ++ +   +   K   +       F L P +    
Sbjct: 60  EMDKAGALETSLSFTTPASFWRESGRYNVFGKELLRFKDRKEN-----DFVLGPTHEEAM 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF-NE 403
           + V  + + SY++LP+ L + G  +R+E      GL+R R F   DA+ F   E+    E
Sbjct: 115 LNVVKNKITSYKQLPLNLYQVGLKFRDEARPRF-GLLRCREFVMKDAYSFHKDEEDLTRE 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +      I K  G +  +V+  +      GS      A+N    +L          I
Sbjct: 174 FENMQGTYSKILKRLGLDFRVVEADSGAIGGSGSKEFMVLAQNGEDDILLCSHCDYAANI 233

Query: 464 N 464
            
Sbjct: 234 E 234



 Score = 64.4 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 24/138 (17%), Positives = 49/138 (35%), Gaps = 9/138 (6%)

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNLPLW---LSPIQAIVTTIT---SSAV 565
             + K  P ++     G   R + + +E +F     +W   LSP + ++         A+
Sbjct: 430 DENGKAKPFVMGCYGMGVS-RLVAVAVEASFDERGIVWQEALSPFKLVIILSNIKDEKAL 488

Query: 566 EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
                +   L+   + +  D RNE    K+ +  +      +I G K      + + +  
Sbjct: 489 NLGISLYEDLRKLGIDVLLDDRNERYGVKMNDFELMGFNYALIIG-KGLENNELELVKRK 547

Query: 626 STTTQKVSLLDAIPILTK 643
                K+    A+  L K
Sbjct: 548 DLGKIKLKADTALTELKK 565


>gi|237752688|ref|ZP_04583168.1| prolyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430]
 gi|229376177|gb|EEO26268.1| prolyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430]
          Length = 582

 Score =  125 bits (313), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 52/275 (18%), Positives = 99/275 (36%), Gaps = 27/275 (9%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  +  +    ++   + H  L R      I + GSG+  +   G ++   + S ++ 
Sbjct: 3   FSKIFIPTFKEAPKDVVLKSHEYLIRGG---FIQQIGSGIYNFLPLGKRVLDKIKSIVKE 59

Query: 286 KI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+    V   +LWQ+SG ++ Y   +       D       F L P +    
Sbjct: 60  EMDNAGANEVTLGFVTPANLWQKSGRFERYGKELLRFNDRKDNA-----FVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
             +    +KSY++LP+ L +    +R+E      GLMR R F   D + F +  E +  E
Sbjct: 115 TELVKANVKSYKQLPLHLYQINLKFRDEMRPRF-GLMRAREFIMKDGYSFHSNFEDLKRE 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +      I+   G +   V   +      GS      A            NS +D  
Sbjct: 174 FDLMEQTYSKIFTRLGLDFRAVFADSGAIGGSGSKEFMVLA------------NSGED-- 219

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
              + + +  +YG   E   +      +Q    + 
Sbjct: 220 --TICVCDTCYYGANLEAATRIKAAPSFQAPQAEF 252



 Score = 81.4 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 26/159 (16%), Positives = 56/159 (35%), Gaps = 8/159 (5%)

Query: 491 WQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL 550
                 Q+     S  +A +++    K  P ++     G       I+ ++      +W 
Sbjct: 417 EAGHIFQLGTKYSSAMDATFLDESG-KAQPFIMGCYGIGVSRLLSAIIEQHHDKKGMIWT 475

Query: 551 ---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
              +P    +       S+ +E  ++I   L    +    D R E    KI +  +   P
Sbjct: 476 QATAPFDVDIMVSNIKDSAQLEMGEKIYTALNKEGIECLLDDRAERYGAKIADFELIGFP 535

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             II G K   +  I + R    + + + + D + ++ +
Sbjct: 536 FGIIIG-KGLEKGEIELVRRKDLSREVLKVSDFMALIAE 573


>gi|28210102|ref|NP_781046.1| uridine kinase [Clostridium tetani E88]
 gi|28202538|gb|AAO34983.1| uridine kinase [Clostridium tetani E88]
          Length = 552

 Score =  125 bits (313), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 54/264 (20%), Positives = 108/264 (40%), Gaps = 20/264 (7%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
             +K+              T  D+ E+I        V   +NGKV +L+ P+  EG +E 
Sbjct: 2   EKLKINLEGKKEVLIEKGKTLRDILENIHVENKFPIVLGEMNGKVYELNSPIVEEGQLEF 61

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           I             +   I+ +A    +P   ++I   +  G Y +  K +  +  EL +
Sbjct: 62  IDLGSDTGNRAYIRTLQFILIKATLEEFPGANISIQHSLSKGLYCEISKGKILTEKELEK 121

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           I+ +M+EII +D P  ++Y + E+  E+ +      ++++L ++     + LY     ++
Sbjct: 122 IKARMKEIIYKDMPIKEEYFTKEETMEMLKKYNMNDRIKLLSNLQLD-KIKLYELDGVYE 180

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
              GP   STG +++F  +    G   R               + T++E  +   FLE  
Sbjct: 181 YFYGPMGESTGIIREFDLMYYEPGFILR---------------YPTKEEPDRLPVFLEHR 225

Query: 242 EKRDHRKLAREMDLFHIAEDGSGV 265
           +  +   + RE +++    +   V
Sbjct: 226 KLAN---IFRETEIWGDILEVPNV 246


>gi|226306102|ref|YP_002766062.1| prolyl-tRNA synthetase [Rhodococcus erythropolis PR4]
 gi|259511615|sp|C0ZY88|SYP_RHOE4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226185219|dbj|BAH33323.1| prolyl-tRNA synthetase [Rhodococcus erythropolis PR4]
          Length = 581

 Score =  125 bits (313), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 65/361 (18%), Positives = 134/361 (37%), Gaps = 26/361 (7%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
            ++E   H+ L R   +  IA    GV  W   G ++ + +   +R ++     +EI  P
Sbjct: 18  SDAEVASHKLLVRAGYVRRIA---PGVYSWLPLGLRVLREVERVVREEMNAIGGQEILLP 74

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +L +  ++ S  W  Y  N+F +K      +    + L P +             SY++
Sbjct: 75  ALLPRDPYEASNRWTEYGPNLFRLKD-----RKGNDYMLGPTHEELFALTVKGEYNSYKD 129

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYK 416
            PV L +  + YR+E      G++R R F   D++ F   ++   E  + H      I+ 
Sbjct: 130 FPVTLYQVQTKYRDEERPR-AGILRGREFLMKDSYSFDLSDEGLTESYQAHRGAYEKIFT 188

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN--TGVLLGEGAF 474
             G + ++V  ++       S+    ++E      +  +++     +     V+     F
Sbjct: 189 RLGVKYVIVSATSGAMGGSASEEFLAESEIGEDTYVRCLESGYAANVEAVKTVVPDSIPF 248

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
            G   E  + D         TI    +  +  +     + ++    +M+   + G     
Sbjct: 249 DGL-PEAKVYDTAN----TPTIDTLVDWANGADLGRTITAADTLKNIMVKTRLPGGEWEL 303

Query: 535 IGIMI----ENFKGNLPLWLSPIQAIVTTITS-SAVEYAQEIA---NLLKSHHLSIETDF 586
           +GI I    E  +  L   L P + ++ T T      +  +       L+++ +    D 
Sbjct: 304 LGIGIPGDREVDEKRLEASLEPAEFVMITETDFKNNPFLAKGYIGPKALQANGVRYLVDP 363

Query: 587 R 587
           R
Sbjct: 364 R 364



 Score = 83.7 bits (205), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 63/160 (39%), Gaps = 10/160 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G + Q+       F    +  + +   P M    V   + R + ++ E       
Sbjct: 419 RGIEIGHVFQLGRKYTDVFTVDVLAENGKPVRPTMGSYGV--GVSRLVAVIAEQHHDEKG 476

Query: 548 L-WLSPIQA-----IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           L W + +       ++     +A E A+ +A  L    L +  D R  +   K ++  + 
Sbjct: 477 LRWPAEVSPADVYLVIANKDETAREGAEGLAAQLDRAGLEVILDDRKASPGVKFKDSELI 536

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            +P+I++ G +  ++  + IR   +  ++++    AI  +
Sbjct: 537 GVPLIVVVG-RGWADGKVEIRDRFTGESREIDADSAIEAI 575


>gi|223984654|ref|ZP_03634777.1| hypothetical protein HOLDEFILI_02073 [Holdemania filiformis DSM
           12042]
 gi|223963395|gb|EEF67784.1| hypothetical protein HOLDEFILI_02073 [Holdemania filiformis DSM
           12042]
          Length = 566

 Score =  125 bits (313), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 48/262 (18%), Positives = 110/262 (41%), Gaps = 12/262 (4%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYR 315
            I +  +GV  +   G+K+ + + + +R ++ +   +E+  P ++ + ++  SG  D++ 
Sbjct: 31  MIKKSSAGVYMYLPLGYKVLKKIENIVREEMDQAGSQELLMPALIPEEVYVASGRRDNFG 90

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
           ++MF++K      +  +++ L P +           ++SY+++P  L +F + YR+E   
Sbjct: 91  SSMFSLKD-----RFNKSYVLGPTHEELFAVAAGMKIRSYKDMPFNLYQFQTKYRDEARP 145

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
             +GL+RVR F   DA+ F   E   +    K+ +     +     +  +V+  T     
Sbjct: 146 R-YGLIRVREFIMKDAYSFDKDEAGMDVAYQKMFDAYKRAFDRMHMDYKIVRADTGVMGG 204

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF----YGPKFEYILKDAIGRD 490
           + S+      E     ++   + S    +       EGA     + PK      +A   +
Sbjct: 205 LLSEEFQAVTEIGEDVLVLCDQCSFASNLEVAPCKDEGADSTEAHLPKELVETPNARTIE 264

Query: 491 WQCGTIQVDFNLPSRFNAFYVN 512
              G +    N   +   + ++
Sbjct: 265 EVTGFLHEAANQFVKTLIYNID 286



 Score = 82.1 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 68/175 (38%), Gaps = 15/175 (8%)

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           G K  +     IG  ++ GT           +  Y++  + K +PV +     G I R +
Sbjct: 394 GGKIVFKKGIEIGNTFKLGT-----KYAQAMDLEYLDQEN-KLNPVWMGSYGIG-IGRCM 446

Query: 536 GIMIENFKGN----LPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRN 588
             + E          P+ ++P    +  I       +  A+++   L++  + +  D R+
Sbjct: 447 AALAEQHSDEHGLCWPINIAPYPVAIVVIAKKDEQQMAAAEQLYAQLQAAGVDVMLDDRD 506

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           E    K ++  +   PI +  G K   +  + ++   +   + +S+ + +  + +
Sbjct: 507 ERPGVKFKDMDLIGTPIRLTVGKK-IGDGLVEMKLRKAEKAEDISIDNVVAKVLE 560


>gi|182683244|ref|YP_001834991.1| prolyl-tRNA synthetase [Streptococcus pneumoniae CGSP14]
 gi|303259373|ref|ZP_07345350.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
 gi|303261128|ref|ZP_07347077.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
 gi|303263456|ref|ZP_07349379.1| prolyl-tRNA synthetase [Streptococcus pneumoniae BS397]
 gi|303265748|ref|ZP_07351646.1| prolyl-tRNA synthetase [Streptococcus pneumoniae BS457]
 gi|303267821|ref|ZP_07353623.1| prolyl-tRNA synthetase [Streptococcus pneumoniae BS458]
 gi|226701345|sp|B2ISI9|SYP_STRPS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|182628578|gb|ACB89526.1| prolyl-tRNA synthetase [Streptococcus pneumoniae CGSP14]
 gi|302637965|gb|EFL68451.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
 gi|302639307|gb|EFL69765.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
 gi|302642517|gb|EFL72862.1| prolyl-tRNA synthetase [Streptococcus pneumoniae BS458]
 gi|302644656|gb|EFL74905.1| prolyl-tRNA synthetase [Streptococcus pneumoniae BS457]
 gi|302647229|gb|EFL77453.1| prolyl-tRNA synthetase [Streptococcus pneumoniae BS397]
          Length = 617

 Score =  125 bits (313), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 93/246 (37%), Gaps = 11/246 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  ++    GV  +     ++ +   + MR++
Sbjct: 4   SKMPIPTLREMPSDAQVISHALMLRAGYVRQVSA---GVYSYLPLANRVIEKAKNIMRQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +     E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     
Sbjct: 61  FEKIGAVEMLAPALLSAELWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           A+    +KSY++LP+ L +    YR+E     +GL+R R F   DA+ F       +   
Sbjct: 116 AIVRDSVKSYKQLPLNLYQIQPKYRDEKRPR-NGLLRTREFIMKDAYSFHANYDSLDSVY 174

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
             +                  +        G D+    A    +  LD      +  ++ 
Sbjct: 175 DEYKAAYERIFTRSGLDFKAIIGDGGAMG-GKDSQEFMAITSARTALDRWVVLDKSVVSF 233

Query: 466 GVLLGE 471
             +  E
Sbjct: 234 DEIPAE 239



 Score = 65.6 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 62/173 (35%), Gaps = 22/173 (12%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S      V   + +  P+++     G       +M ++       
Sbjct: 441 RGIEIGHIFKLGTRYSASMGADVLDENGRAVPIIMGCYGIGVSRLLSAVMEQHARLFVNK 500

Query: 542 ---------FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKS----HHLSIETDFRN 588
                    +  N P  L+P    + T+     E AQ +   L++        + TD RN
Sbjct: 501 TPKGEYRYAWGINFPKELAPFDVHLITVNVKDEE-AQALTEKLEASLMGAGYEVLTDDRN 559

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           E +  K  +  +  +PI I  G K A++  + ++   +  T +V   + +  L
Sbjct: 560 ERVGVKFSDSDLIGLPIRITVGKK-ATDGIVEVKIKATGDTIEVHADNVLETL 611


>gi|257456072|ref|ZP_05621275.1| prolyl-tRNA synthetase [Treponema vincentii ATCC 35580]
 gi|257446530|gb|EEV21570.1| prolyl-tRNA synthetase [Treponema vincentii ATCC 35580]
          Length = 578

 Score =  125 bits (313), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 45/198 (22%), Positives = 82/198 (41%), Gaps = 11/198 (5%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
            H+ L R   +  +   G+G+  +   G ++F+ + + +R +I      E     V    
Sbjct: 22  SHQLLLRAGMIRRL---GNGLFNYLPLGLRVFRKVENIVREEIDAIGCLECKASVVAPGE 78

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           +WQ+S  W +    +  +K      +  +   + P N     A+  + L SY++ P+ + 
Sbjct: 79  IWQESKRWYTMGDGLLRMKN-----RLGQDLVVSPTNEESFTALMRYELGSYKDYPLSVY 133

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT-KEQMFNECLKIHNLIISIYKDFGFEK 422
              + YR+E     +GLMR R FT  DA+ F T  E +             I++ FG   
Sbjct: 134 HINTKYRDEIRPR-YGLMRAREFTMKDAYSFHTNAECLDKTYRAFGEAYEKIFRRFGLSI 192

Query: 423 IMVKLSTRPEKRVGSDAL 440
           I V+  +      GS+  
Sbjct: 193 IRVRADSGSMGGSGSEEF 210



 Score = 68.7 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 24/151 (15%), Positives = 50/151 (33%), Gaps = 8/151 (5%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIV 557
           +        N  Y++   ++ +P+M      G       I+ E+   N  +W   +    
Sbjct: 420 LGTKYTKSMNMTYLDESGQQQYPLM-GCYGIGIDRALASIIEEHHDSNGIIWPMSVAPYH 478

Query: 558 TTITSSAVE-----YAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
             I     E      A  + + L    + +  D R E    K ++  +  +PI I+  DK
Sbjct: 479 VGIVPIQYEGTMKAAADRLHDELTMRGIEVLLDDRVERPGVKFKDMDLIGLPIRIVISDK 538

Query: 613 EASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +     +  +    T    + L      + +
Sbjct: 539 KLPN--VEFKFRSDTDPVNMPLDGVADYVVQ 567


>gi|307718879|ref|YP_003874411.1| hypothetical protein STHERM_c11970 [Spirochaeta thermophila DSM
           6192]
 gi|306532604|gb|ADN02138.1| hypothetical protein STHERM_c11970 [Spirochaeta thermophila DSM
           6192]
          Length = 552

 Score =  125 bits (313), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 46/216 (21%), Positives = 97/216 (44%), Gaps = 14/216 (6%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAE----SISRSLAKKAVAVAINGKVCDLSDPVR-EG 57
           ++I++  P+G +   P      D+ +     I        VA  +N ++   +  +    
Sbjct: 6   NEIRVMLPNGHVLEVPYGTRVGDLLKAHLPDIHP------VAARVNNELTSFTYKLEFNS 59

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSD 117
           SIE +T + P  + + R S   ++A A       +++ IG  + DG++Y     +  +  
Sbjct: 60  SIEPVTFDQPEGMIIYRASLCFLLAMAAHRR--GLRLIIGHSLGDGYFYTLRDREDVTPR 117

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           E+  ++++MQ++I RD P  ++ LS++ A   F+ + +   V++L +   +  + ++   
Sbjct: 118 EVDLLQEEMQDLIRRDIPIQRKVLSYQDAIWEFQGRDQMQTVKLL-TFRNENKIPVFFCD 176

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSN 213
            + DL   P V  TG +K F       G   R   +
Sbjct: 177 TYCDLATIPLVPRTGLLKGFRLQHFPPGFVLRFPRH 212


>gi|316974411|gb|EFV57903.1| proline--tRNA ligase [Trichinella spiralis]
          Length = 413

 Score =  125 bits (313), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 60/373 (16%), Positives = 135/373 (36%), Gaps = 37/373 (9%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK 322
           G+  +   G +  + L   +R ++       +    + ++ +W+Q+G W+   A +  +K
Sbjct: 22  GLFHYLPVGLRALEKLCIIIRHEMDLLGAGRMALSNLCERSVWEQTGRWEEVSAELLRLK 81

Query: 323 CADDTIKDLRTFALKPMNCPGHVAVFNHG-LKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
                 +  + + L P +     ++ +     +   LP+ L +    YR+EP+    GL 
Sbjct: 82  D-----RKGKEYCLCPTHEESVTSLISRFSPITSSRLPLLLYQITLKYRDEPNPRF-GLA 135

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           R R F   D + F    +   +    ++    SI++  G +   V+ +        S   
Sbjct: 136 RAREFFMKDMYSFDLDTKSAMKTYDAVNKAYFSIFQTLGIKVHRVEAAVGSIGGNLSHEF 195

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDF 500
             +++     +L  +    Q +    VL+       P    +  +   +          F
Sbjct: 196 HCESQYGEDYIL--MCEKCQKKFTEEVLVNSTT--CP----VCNEPFQKVRSLELAHTFF 247

Query: 501 NLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE----NFKGNLPLWLSPIQA 555
                  A           P+ +    FG  I R +  +++    + +   PL ++P + 
Sbjct: 248 LGEKYSQALGATVTCNPGSPIPLQMGCFGIGISRLLAAIVDYFSSDEEIRWPLCIAPYKV 307

Query: 556 IVTTITSSAVEY-----AQEIANLLKS---HHLSIETDFRNE-TINYKIREHSIKKIPII 606
            V    + + EY     A  +A  L S    +  I  D R   T+  ++R+   +  P +
Sbjct: 308 CVIPPKNGSREYPATPMALHLAEQLSSLANFNEEIVYDDRTHQTVGTRLRDAKRRGYPYV 367

Query: 607 IICGDKEASERSI 619
           I+      + +++
Sbjct: 368 IV------ANKTV 374


>gi|57242133|ref|ZP_00370073.1| prolyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
 gi|57017325|gb|EAL54106.1| prolyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
          Length = 568

 Score =  125 bits (313), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 46/241 (19%), Positives = 90/241 (37%), Gaps = 11/241 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q     +    +++    H  L R      I ++GSG+  +   G  ++  + + ++ 
Sbjct: 3   FSQFYAPTFKEAPKDATLPSHIFLTRAG---FIEQNGSGLYNFLPLGKMVYSKIENIIKE 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E +         WQ+SG ++ +   +   K   +       F L P +    
Sbjct: 60  EMDKAGALETSLSFTTPASFWQESGRYNVFGKELLRFKDRKEN-----DFVLGPTHEEAM 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF-NE 403
           + V  + + SY++LP+ L + G  +R+E      GL+R R F   DA+ F   E+    E
Sbjct: 115 LNVVKNKITSYKQLPLNLYQIGLKFRDEARPRF-GLLRCREFVMKDAYSFHKDEEDLTRE 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +      I K    +  +V+  +      GS      A+N    +L          I
Sbjct: 174 FENMQGTYSKILKRLELDFRIVEADSGAIGGSGSKEFMVLAQNGEDDILLCSHCDYAANI 233

Query: 464 N 464
            
Sbjct: 234 E 234



 Score = 62.9 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/138 (17%), Positives = 51/138 (36%), Gaps = 9/138 (6%)

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNLPLW---LSPIQAIVTTIT---SSAV 565
             + K  P ++     G   R + + +E +F     +W   LSP + ++         A+
Sbjct: 430 DENGKAKPFVMGCYGMGVS-RLVAVAVEASFDERGIVWQEALSPFKLVIILSNIKDEKAL 488

Query: 566 EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
                +   L+   +++  D RNE    K+ +  +      +I G K      + + +  
Sbjct: 489 NLGISLYEDLRKLGINVLLDDRNERYGVKMNDFELMGFNYALIIG-KSLENNELELVKRK 547

Query: 626 STTTQKVSLLDAIPILTK 643
             +  K+    A+  L K
Sbjct: 548 DLSKIKLKADTALIELKK 565


>gi|332686700|ref|YP_004456474.1| prolyl-tRNA synthetase [Melissococcus plutonius ATCC 35311]
 gi|332370709|dbj|BAK21665.1| prolyl-tRNA synthetase [Melissococcus plutonius ATCC 35311]
          Length = 574

 Score =  124 bits (312), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 44/192 (22%), Positives = 82/192 (42%), Gaps = 10/192 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++E   H+ L R   +  IA    GV  +     +I + L   MR +
Sbjct: 4   SKMFIPTLREIPNDAEVLSHQILLRGGYIRQIAA---GVYAYLPLANRIIENLKKIMREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +  D  E+  P +L   LW++SG + +Y  +++ +K  ++     R + L P +    V
Sbjct: 61  FEKIDAIEMLLPAILPAELWEKSGRYQTYGPDLYRLKDRNE-----RQYILGPTHEETFV 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +  + + SY+ LP+ L +  S YR+E      GL+R R F   D + F   E+  +   
Sbjct: 116 ELIGNDVNSYKRLPLNLYQIQSKYRDEKRPRF-GLLRGREFIMKDGYSFHATEESLDTTY 174

Query: 406 KIHNLIISIYKD 417
             +    S    
Sbjct: 175 NDYEKAYSAIFK 186



 Score = 67.5 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 28/152 (18%), Positives = 55/152 (36%), Gaps = 10/152 (6%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG----NLPLWLSPI 553
           +        NA  ++ + ++ + +M    +   + R    + E        N P+ ++P 
Sbjct: 414 LGTRYSESMNATILDENGKEQYIIMGSYGI--GVSRLFAAIAEQNADDKGVNWPIGIAPF 471

Query: 554 QAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
              V  +        + ++EI  L+ S    +  D RNE    K  E  +   PI I  G
Sbjct: 472 DIHVVQMNMKDDEQTQLSEEIEELMISAGYEVLVDDRNERAGVKFAEADLIGCPIRITVG 531

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            K A +  + I+   +    +V   +    L 
Sbjct: 532 KK-AIDDIVEIKIKRTGEMLEVKKEELKSTLA 562


>gi|328779973|ref|XP_001122171.2| PREDICTED: probable prolyl-tRNA synthetase, mitochondrial-like
           [Apis mellifera]
          Length = 428

 Score =  124 bits (312), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 65/367 (17%), Positives = 131/367 (35%), Gaps = 33/367 (8%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I +  +G+      G +IF  L + +  +++    +++  P +   HLW+++   ++   
Sbjct: 45  IKQVTTGMYAILPLGLRIFNKLTALVDNEMQKIGAQKLLLPALTPTHLWKKTDRLNN--- 101

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSG 375
                +      +  R + L P +     +V +  G+ S + LP++L +  + +R+E   
Sbjct: 102 ---VTELFKIQDRAQRQYILSPTHEESICSVMSTIGILSPKMLPLKLYQISNKWRDEIKP 158

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK-DFGFEKIMVKLSTRPEKR 434
              G +R R F   D + F   +   N   + + L+ + Y+  F    I    S      
Sbjct: 159 RF-GFLRSREFMMKDLYTF---DINLNNAQETYALVCNAYENIFKKIGITYIKSIGDPGL 214

Query: 435 VGSDALWD-DAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
           +G     +    + +   +  I  S Q  IN  +       Y PK     K+A       
Sbjct: 215 IGDSISHEYHYISDIGEDIVCICPSCQYSINKTICKES---YCPKC----KNAFNEKSAA 267

Query: 494 GTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE----NFKGNLPL 548
                   N             + +  P+++     G + R   +M E      +   P 
Sbjct: 268 EVGHTFLLNTKYTIPLEVKIKINNESIPLVMGCFGLG-LSRIFTVMTELLSTKEELRWPK 326

Query: 549 WLSPIQAIVTT-----ITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIREHSIKK 602
            L+P    +          +  +Y +E+  +L   ++    D R N TI  +     I  
Sbjct: 327 NLAPYTVCLIPPKAGSKEENKSQYVKEVMEILNQLNIDTILDDRTNLTIGKRFMHARITG 386

Query: 603 IPIIIIC 609
            P +II 
Sbjct: 387 FPYVIII 393


>gi|44662849|gb|AAS47506.1| threonyl tRNA synthetase [Meiothermus silvanus DSM 9946]
          Length = 149

 Score =  124 bits (312), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 61/149 (40%), Positives = 92/149 (61%), Gaps = 12/149 (8%)

Query: 72  VIRHSCAHIMAEAVQSIW-------PEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           + RH+ AH+MA+AV+  +         V++AIGP+IE+GFYYD D  +P    +L +IE 
Sbjct: 1   IFRHTLAHVMAQAVREFFAAKGFDPDAVKLAIGPVIENGFYYDIDPPEPLGEGDLPEIEA 60

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE----WF 180
           +M +I+  +    +  L  E+A   FE  K+ YK E+++ +P    ++ Y QGE    + 
Sbjct: 61  RMHQIVKENLELRRFVLPREEALRRFEG-KDPYKTELIQDLPEGVEISFYAQGEGTHGFT 119

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWR 209
           DLCRGPHV STG++  +FKL  +AGAYWR
Sbjct: 120 DLCRGPHVPSTGRIPPYFKLTHIAGAYWR 148


>gi|168704849|ref|ZP_02737126.1| prolyl-tRNA synthetase [Gemmata obscuriglobus UQM 2246]
          Length = 512

 Score =  124 bits (312), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 62/446 (13%), Positives = 143/446 (32%), Gaps = 82/446 (18%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
               +  + +  + +E  L   ++    ++     G+ +++ +   +    K   +    
Sbjct: 7   QRATNYAQWYLDIVKEAGLADNSDVRGCMVI-KPTGFALWEKMQKALDGLFKSTGHVNAY 65

Query: 296 TPQVLDQHLWQQSGHW-----------DSYR--ANMFAVKCADDTIKDLRTFALKPMNCP 342
            P  +      +                 YR  A        D   +      ++P +  
Sbjct: 66  FPLFIPMSFLAKEEQMAEGFAKECAVVTHYRLKAEPGKPLHVDPAAELEEPLIVRPTSET 125

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN 402
                +   ++SYR+LP+ + ++ +V R E        +R   F   + H   T      
Sbjct: 126 IIWNTYKKWVQSYRDLPLLINQWANVVRWEMR--TRLFLRTAEFLWQEGH---TAHATAK 180

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
           E  +    ++ +Y+ F                         AE  M   +  +     D 
Sbjct: 181 EAEEETLQMVRVYQKF-------------------------AEEWM--AMPVLVGPKTDG 213

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPV 521
                    GA Y    E +++D  G+  Q GT   +  N    F+  + +  +++ +  
Sbjct: 214 QKF-----PGAVYTLCIEAMMQD--GKALQAGTSHFLGQNFAKAFDVKFKDQSNKEEYAW 266

Query: 522 MIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIA----- 572
                 +G   R IG +I    ++    +P  L+P   ++  +  +  E    IA     
Sbjct: 267 A---TSWGVSTRLIGGLIMTHSDDNGLVVPPRLAPTHVVIVPLGKNDAERGPSIAAAEKL 323

Query: 573 ----------NLLKSHHLSIETDFRNET-INYKIREHSIKKIPIIIICGDKEASERSIGI 621
                     +      +S++ D   +    ++  EH ++ +P+ +  G K+  + +  +
Sbjct: 324 AAELRALPRDDFFGYEPISVKIDTMFDKQPGFRYAEHEVRGVPVRVEIGPKDIEKGACAV 383

Query: 622 RRFG----STTTQKVSLLDAIPILTK 643
            R            + L  A   ++K
Sbjct: 384 ARRDVPGKEGKQFGIPLPGAAEHISK 409


>gi|296272187|ref|YP_003654818.1| prolyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299]
 gi|296096362|gb|ADG92312.1| prolyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299]
          Length = 572

 Score =  124 bits (312), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 56/261 (21%), Positives = 98/261 (37%), Gaps = 27/261 (10%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  +        ++    H+ L R      I + GSG+  +   G  +   + + ++ 
Sbjct: 3   FSQMFMPTTKETPNDATLASHQYLIRGG---FITQTGSGLYNFLPLGKIVLDKIRAVVKE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E+    V    LW+QSG        +   K      +    F L P N    
Sbjct: 60  EMDNTGANELLMSFVTPLELWEQSGRASVMGPELLKFKD-----RKGAGFVLSPTNEETV 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNE 403
           V +  + + SY++LP+ L    + +R+E      GLMR R F   DA+ F  T E +  E
Sbjct: 115 VDIVKNRITSYKDLPINLYHINTKFRDEARPRF-GLMRGREFLMKDAYSFHATHEDLVRE 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              + +    IY+  G E  +V   +      GS      A            NS +D  
Sbjct: 174 FHVMEDAYKKIYERLGLEYRVVAADSGAIGGSGSKEFMVLA------------NSGED-- 219

Query: 464 NTGVLLGEGAFYGPKFEYILK 484
              +++ E   YG   E  ++
Sbjct: 220 --TIVVCEDCEYGANIEAAVR 238



 Score = 79.1 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 62/161 (38%), Gaps = 11/161 (6%)

Query: 491 WQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNLPLW 549
                 Q+     S  +A +++++  K  P ++     G   R +  +IE N      +W
Sbjct: 413 EAGHIFQLGTKYSSAMDATFLDNNG-KAQPFIMGCYGIGVS-RLVAAVIEQNHDDKGCIW 470

Query: 550 L---SPIQAIVTTITSSAVEYA---QEIANLLKSHHLSIETDFR-NETINYKIREHSIKK 602
               +P    V    +   E     ++I N LK   +S   D R N    +K+ +  +  
Sbjct: 471 TKETAPFMVDVIVSNAKKEEELNAGKKIYNDLKIAGISTILDDRVNARFGFKMSDFELIG 530

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            P  ++ G K   E  + I    +   ++VSL + +  L K
Sbjct: 531 FPYAVVVGKK-LPEGIVEIVNRKTLEKEEVSLDEVVNKLKK 570


>gi|196230454|ref|ZP_03129316.1| prolyl-tRNA synthetase [Chthoniobacter flavus Ellin428]
 gi|196225384|gb|EDY19892.1| prolyl-tRNA synthetase [Chthoniobacter flavus Ellin428]
          Length = 508

 Score =  124 bits (312), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 68/436 (15%), Positives = 156/436 (35%), Gaps = 75/436 (17%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEIN 295
             +E     ++++ R  DL   ++    ++     G+ +++ +       +K+  +    
Sbjct: 11  RRDEDFPEWYQQVVRAADLAENSDVRGCMVI-KPWGYGLWENMQRIFDGMLKETGHRNAY 69

Query: 296 TPQVLD-QHLWQQSGHWDSYRANMFAVKC------------ADDTIKDLRTFALKPMNCP 342
            P  +   +L +++ H + +      V                   +      ++P +  
Sbjct: 70  FPLFIPLSYLAKEAAHVEGFAKECAVVTHHRLEADGRGGLRPAPAAELTEPLIVRPTSET 129

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN 402
              A +   ++SYR+LP+ + ++ +V R E    L   +R   F   + H   T  +   
Sbjct: 130 IIGASYAKWVQSYRDLPILINQWCNVVRWEMRPRL--FLRTAEFLWQEGH---TAHESAE 184

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
           + L+  +LI+ +Y+ F                         A + +   + T + S  +R
Sbjct: 185 QALQETDLILGLYEKF-------------------------ARDYLALPVITGEKSEAER 219

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPV 521
                    GA      E +++D   +  Q GT   +  N        + +   ++ +  
Sbjct: 220 FP-------GAVKTLCIEAMVQDR--KAIQAGTSHFLGQNFAKASEIKFQSREGKEEYA- 269

Query: 522 MIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTIT------SSAVEYAQEI 571
                 +G   R IG ++    ++    LP  ++P Q ++  I        +    A ++
Sbjct: 270 --WTTSWGVSTRLIGTVLMAHSDDDGLILPPRIAPAQIVILPIAPKPETRDAVFAAADKL 327

Query: 572 ANLLKSH-----HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI--RRF 624
           A  L++       +S+E D R+     K  E   K +PI I  G ++  + ++ +  R  
Sbjct: 328 AAELRAQTAFGEKISVEVDKRDIGGGTKSWEWIKKGVPIRIELGPRDLEKGTVAVARRDR 387

Query: 625 GSTTTQKVSLLDAIPI 640
           G    + V   + +  
Sbjct: 388 GPKEKEFVPNAEFVAK 403


>gi|303557|dbj|BAA03654.1| DrpA protein [Escherichia coli W3110]
          Length = 155

 Score =  124 bits (312), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 37/162 (22%), Positives = 72/162 (44%), Gaps = 10/162 (6%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + + +R 
Sbjct: 3   TSQYLLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGVRVLKKVENIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E++ P V    LWQ+SG W+ Y   +       +     R F L P +    
Sbjct: 60  EMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGE-----RPFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
             +  + L SY++LP+   +  + +R+E      G+MR R F
Sbjct: 115 TDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRF-GVMRSREF 155


>gi|115532348|ref|NP_001040689.1| Prolyl tRNA Synthetase family member (prs-2) [Caenorhabditis
           elegans]
 gi|3880329|emb|CAB04884.1| C. elegans protein T27F6.5a, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 454

 Score =  124 bits (312), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 68/391 (17%), Positives = 132/391 (33%), Gaps = 33/391 (8%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
           ++S+   H  L        I     G       G ++   L   +  + ++    +I  P
Sbjct: 16  QKSKSMAHTMLVENG---FILPTAKGFYSLLPLGQRVIDKLCRILDVEFQNSGALKIAMP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH-GLKSYR 356
            V  Q LW+++G W++    M          +      L+P        +          
Sbjct: 73  IVGTQQLWEKTGRWEAMGPEMIRFHD-----RQQNHMCLQPTAEEMCTELIATLSPLKKS 127

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           + P+ + + G  +R+E +    GLMR R F   D + F T  +   +       I    +
Sbjct: 128 QFPLIVYQIGEKFRDEMNPRF-GLMRGRQFLMKDMYSFSTDAETSQQTYAQIRQIYD--R 184

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDT-IKNSSQDRINTGVLLGEGAFY 475
            FG    + +   + E   G        E  +K  L+    N  ++  N     G G   
Sbjct: 185 IFGEILQLDEDVIKVEADSGVHGGHISHEYHLKSSLEEDFVNFCENCKNHNKFEGPGP-- 242

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
             K E   +++     +  ++++           Y  +   K     +    FG  + R 
Sbjct: 243 -AKCEKCAENSSKTVQKIPSVEIAHTF--HLGTKYSEALGAKFQGKPLDMCCFGIGVTRL 299

Query: 535 IGIMIE-----NFKGNLPLWLSPIQAIVTT----ITSSAVEYAQEIANLLKSHHLSIETD 585
           +   I+     +    LP  ++P  A++      +++  VE A   A+        I  D
Sbjct: 300 LPAAIDLLSVSDKALRLPRAIAPFDAVIIVKKSLMSNVIVEMASSSASRYLKGG--ILLD 357

Query: 586 FRNE-TINYKIREHSIKKIPIIIICGDKEAS 615
            R E +   +I + +   IP I++    E  
Sbjct: 358 DRVEMSAGKRIHDANRLGIPFILVI-ANETE 387


>gi|317471546|ref|ZP_07930894.1| TGS domain-containing protein [Anaerostipes sp. 3_2_56FAA]
 gi|316900972|gb|EFV22938.1| TGS domain-containing protein [Anaerostipes sp. 3_2_56FAA]
          Length = 98

 Score =  124 bits (312), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 32/93 (34%), Positives = 56/93 (60%), Gaps = 1/93 (1%)

Query: 5  IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
          +K+T  DGS+K +    +  D+A+ IS  LA+ A A  +NG+V DL   +  +  + I+T
Sbjct: 1  MKITLKDGSVKEYSQSMSVIDIAKDISEGLARAACAGEVNGEVVDLRTILEDDCELNILT 60

Query: 64 PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAI 96
           +        RH+ +HI+A+AV+ ++PE ++AI
Sbjct: 61 FDSEGGRHAFRHTASHILAQAVKRLYPETKLAI 93


>gi|319956647|ref|YP_004167910.1| prolyl-tRNA synthetase [Nitratifractor salsuginis DSM 16511]
 gi|319419051|gb|ADV46161.1| prolyl-tRNA synthetase [Nitratifractor salsuginis DSM 16511]
          Length = 571

 Score =  124 bits (312), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 48/263 (18%), Positives = 96/263 (36%), Gaps = 27/263 (10%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  +        ++    H  L R      I   G+G+  +   G +    +   ++ 
Sbjct: 3   FSKLLIPTAKEAPSDAVLPSHIYLLRAG---FIQSVGAGLYNFLPLGKRSLDRVRQVVKE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +E++   V    LW++SG ++ Y   +       +       F L P +    
Sbjct: 60  ELDAAGCQEVDLAFVTPAELWRESGRFEKYGKELLRFTDRKEN-----EFVLGPTHEEMM 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
           V +    +KSY++LP+ L +  + +R+E      GLMR R F  +D + F    E M  E
Sbjct: 115 VNLVRQSVKSYKQLPLHLYQIKTKFRDEIRPRF-GLMRGREFLMEDGYSFHKDEEDMKRE 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +      I+   G +  +V+  +      GS      A++                 
Sbjct: 174 FDHMEATYSRIFTRLGLDFRVVEADSGAIGGSGSKEFMVLADSG---------------- 217

Query: 464 NTGVLLGEGAFYGPKFEYILKDA 486
              +++ EG  YG   E  ++  
Sbjct: 218 EDTIVVCEGCDYGANIEAAVRAP 240



 Score = 80.6 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 27/162 (16%), Positives = 63/162 (38%), Gaps = 9/162 (5%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           +  + G I Q+        NA +++ + ++  P ++     G       I+ ++      
Sbjct: 410 KGIEVGHIFQLGTRYSEPLNATFLDENGKR-RPFVMGTYGIGVSRLLAAIIEQHHDDRGC 468

Query: 548 LWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W    +P    +        +  E A+E+  LLKS  + +  D R E   +K+++  + 
Sbjct: 469 IWTRESAPFDVEIIVSNIANDAEREAAEELYRLLKSKGVEVLLDDRKERFGFKMKDFELI 528

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            IP+ I+ G K  ++  + +          + L      + +
Sbjct: 529 GIPLGIVVGKK-LADGQVELIVRDGLERIDLPLERVADEVLE 569


>gi|296185726|ref|ZP_06854135.1| phosphoribulokinase / Uridine kinase family protein [Clostridium
           carboxidivorans P7]
 gi|296049854|gb|EFG89279.1| phosphoribulokinase / Uridine kinase family protein [Clostridium
           carboxidivorans P7]
          Length = 551

 Score =  124 bits (312), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 48/209 (22%), Positives = 86/209 (41%), Gaps = 3/209 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEI 61
           S +K+   +          T  DV +  S       V   ING+ C+L+  + E S IE 
Sbjct: 2   SKLKVKI-NNKELFIEKGTTLYDVIKKSSCEQNIPIVLGKINGEYCELTSTIEENSEIEA 60

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +   D         +   I+ ++V  ++PE Q+ I   +  G + +  K  P + +++ +
Sbjct: 61  VNITDKLGSKTFIRTLQFILIKSVFDLFPEAQITIEHSLSKGLFGEIHKNTPLTEEDIQK 120

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           I+ +M E I ++    K  +  +KA E+F + +   KV +L  +     V LY     +D
Sbjct: 121 IKIRMNETIQKNIQIKKVSMDRKKAIEIFSTYRMEDKVRLLNHVN-TATVKLYELDGRYD 179

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRG 210
              G    STG +  F       G   + 
Sbjct: 180 YFYGSMAYSTGIINVFDLKYYEPGFLLKY 208


>gi|255322659|ref|ZP_05363803.1| prolyl-tRNA synthetase [Campylobacter showae RM3277]
 gi|255300220|gb|EET79493.1| prolyl-tRNA synthetase [Campylobacter showae RM3277]
          Length = 570

 Score =  124 bits (312), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 45/221 (20%), Positives = 87/221 (39%), Gaps = 11/221 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++          +++    H+ L R        + GSG+  +   G ++ + + + ++ 
Sbjct: 3   FSKLYAPTAKEAPKDASLASHKFLLRAGYA---EQVGSGLYNFLPLGKRVLENIKNIVKE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +   +EI+   V    LW++SG +D Y   +   K   +       F L P N    
Sbjct: 60  ELDEAGAQEISMSFVTSADLWRESGRFDVYGKELLRFKDRKEN-----DFVLSPTNEESV 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT-KEQMFNE 403
           VA+    + SY++LP+ L +  + +R+E      GL+R R F   D + F    E +  E
Sbjct: 115 VALVRGKVTSYKQLPLNLYQINTKFRDEARPRF-GLLRGREFLMKDGYSFHANAEDLDRE 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
              +      I+   G     V+  +      GS      A
Sbjct: 174 FDLMEKTYSKIFTRLGLNFRAVRADSGAIGGSGSKEFMVLA 214



 Score = 81.8 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 27/152 (17%), Positives = 58/152 (38%), Gaps = 10/152 (6%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNLPLW---LSPI 553
           +         A +++ +  K  P ++     G   R + + +E +      +W   L+P 
Sbjct: 420 LGTKYSEPMGATFLDENG-KAKPFIMGCYGIGVS-RLVAVAVEASHDEKGIIWNETLAPF 477

Query: 554 QAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           +  +          V++AQ +   L+   +S+  D RNE    K+ E  +   P  +I G
Sbjct: 478 KFEIIVSNLKDEEGVKFAQGLYEDLRGAGVSVLLDDRNERFGVKMSEFELMGFPYAVIVG 537

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            K  +E ++ +        + V   + +  L 
Sbjct: 538 -KGLAEGTVELVTRDGLAKETVKASEILARLK 568


>gi|300728304|ref|ZP_07061670.1| phosphoribulokinase family protein [Prevotella bryantii B14]
 gi|299774416|gb|EFI71042.1| phosphoribulokinase family protein [Prevotella bryantii B14]
          Length = 556

 Score =  124 bits (312), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 46/238 (19%), Positives = 95/238 (39%), Gaps = 3/238 (1%)

Query: 5   IKLTFPDGSIKN-FPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEII 62
           I++   +        + ++ S+V    +  +    ++  +N KV  L   +     IE  
Sbjct: 8   IQIRCKNNKKTQNVAIGSSLSEVFRQFNLKMDYGPISAKVNNKVEGLDFQLYHSKDIEFQ 67

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
                        +   ++ +AV  ++P   V I   + +G+Y D + EQP + + +A+I
Sbjct: 68  DMYSASGSRSYARTLFFVLCKAVHDLYPISLVIIDIPVSNGYYVDVEMEQPITPEVVARI 127

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
            ++MQEII    P     +  E+A  +F  K +  K ++L S+  +   T Y   ++ D 
Sbjct: 128 RQRMQEIIDAGIPVKHHEVLTEEAYRMFRDKGDKAKAKLLSSV-GRLYTTYYSIDDYVDY 186

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
             G  + +T  +  F       G   R  S +        T  +   E+ +  +  ++
Sbjct: 187 YYGSLLPNTKDLYLFGLEPYYDGMLLRIPSLKKPGELPEITRQDKMFEIFKEHHRWQK 244


>gi|124025277|ref|YP_001014393.1| prolyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A]
 gi|152112940|sp|A2C0W8|SYP_PROM1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|123960345|gb|ABM75128.1| Prolyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A]
          Length = 596

 Score =  124 bits (311), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 57/303 (18%), Positives = 111/303 (36%), Gaps = 11/303 (3%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  L        E++   H+ L R   +  I     G+  +    WK+ + + S +  +
Sbjct: 4   SRLMLNTLRDVPSEADIISHQLLVRGGYIKRI---TGGIYAYMPLLWKVLKKITSIVEEE 60

Query: 287 I-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      +   PQ+    +W++SG W SY      +    D  +  +   L P +     
Sbjct: 61  LSTKGCLQTLLPQLQPSEIWERSGRWKSYTQGEGIMFSLKD--RQGKELGLGPTHEEVIT 118

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            + +  + SY++LP+ + +  + +R+E      GLMR R F   DA+ F   E       
Sbjct: 119 QIISQTIHSYKQLPINIFQIQTKFRDEIRPRF-GLMRSREFIMKDAYSFHANENDLQSTY 177

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
             + N   +I+   G + + V   +       S      AE+    +L +          
Sbjct: 178 SDMRNAYQNIFTKCGLDFVCVDADSGAIGGAASQEFMVTAESGEDLILISSDGKYGANQE 237

Query: 465 TGV-LLGEGAFYGPKFEYILKDAIGR--DWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
             V ++ EG    P    I+K    +  D  C       +   +  A+       K +PV
Sbjct: 238 KAVSIIEEGNLLEPNKPSIIKTPNQKTIDELCNYNDFHPSQIVKVLAYLATCDDNKKYPV 297

Query: 522 MIH 524
           ++ 
Sbjct: 298 LVS 300



 Score = 55.2 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/176 (17%), Positives = 65/176 (36%), Gaps = 12/176 (6%)

Query: 480 EYILKDAIGRDWQCGTIQVDFNLP---SRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFI 535
           +  + D   +  +C  I++            +      +EK     +    +G  I R  
Sbjct: 416 DRCIHDKTQKLEECRGIEIGHIFQLGTKYSKSLNATFTNEKGIEDHLWMGCYGIGISRLA 475

Query: 536 GIMIENFKGNLP-LWLSPIQAIVT------TITSSAVEYAQEIANLLKSHHLSIETDFRN 588
              +E    +L  +W + I              +     A++I   L  + + +  D R+
Sbjct: 476 QAAVEQNHDDLGIIWPTSIAPFTVIIIIANIKNNDQKCLAEDIYQKLIQNRVDVLLDDRD 535

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +    K ++  +  IP  I+ G +EAS   + +    + TT+ + L   +  L++E
Sbjct: 536 DRAGIKFKDADLIGIPWRIVAG-REASSGLVELHNRKTKTTELLDLNSVLKKLSEE 590


>gi|320105902|ref|YP_004181492.1| prolyl-tRNA synthetase [Terriglobus saanensis SP1PR4]
 gi|319924423|gb|ADV81498.1| prolyl-tRNA synthetase [Terriglobus saanensis SP1PR4]
          Length = 613

 Score =  124 bits (311), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 37/192 (19%), Positives = 80/192 (41%), Gaps = 9/192 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  +        ++    H+ L R   +  +   G+G+  +     +    +++ +R 
Sbjct: 31  WSKLFIPTLREAPADAVVASHQILLRAGYVRQL---GAGLYSYLFLATRSINKIVAIVRE 87

Query: 286 KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++    +E+  P +    +WQ+SG W     NMF +K      +      L   +     
Sbjct: 88  EMDRIGQEMYLPALNPAEVWQESGRWTGMGDNMFRLKD-----RKGADLCLGMTHEEVMT 142

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           ++    ++SY++LP    +  + +R+EP     GL+RVR FT  D++ F   E+  +   
Sbjct: 143 SIARSEIRSYKQLPQIWYQIQTKFRDEPRPK-SGLLRVRQFTMKDSYSFDLNEEGLDVSY 201

Query: 406 KIHNLIISIYKD 417
           K+H+        
Sbjct: 202 KLHDEAYRCIFT 213



 Score = 79.1 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 72/170 (42%), Gaps = 15/170 (8%)

Query: 487 IGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVM------IHRAVFGSIERFIGIMI 539
           +G+  + G I  + +       A  ++ + ++  P+M      I R +  ++ER    M 
Sbjct: 440 LGKAVEIGHIFKLGYKYTESMGARVLDQNGKETMPIMGCYGIGIERILTAAMERSAASMG 499

Query: 540 ENFKGNL----PLWLSPIQAIVTTITSSAVEYAQE---IANLLKSHHLSIETDFRNETIN 592
            + +G++    P  ++P Q IVT    S    A+    IA  L S    +  D R+++  
Sbjct: 500 LSDRGDIRYALPASIAPFQVIVTVTKQSDATLAEAGETIAKALDSAGFDVLLDDRDQSAG 559

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            K ++  +  +P  +  G K   +  + +    +  T + ++ + +P L 
Sbjct: 560 VKFKDADLIGVPYRVNVGKK-LVDGLVELVDRLTGNTIECAVNEVVPQLQ 608


>gi|241888520|ref|ZP_04775828.1| prolyl-tRNA synthetase [Gemella haemolysans ATCC 10379]
 gi|241864787|gb|EER69161.1| prolyl-tRNA synthetase [Gemella haemolysans ATCC 10379]
          Length = 572

 Score =  124 bits (311), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 45/245 (18%), Positives = 90/245 (36%), Gaps = 11/245 (4%)

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISY 282
               ++  +         +E   H+ L +   +  ++    GV  +     ++ Q +   
Sbjct: 6   VVRQSKTFIPTTREVPSSAEAISHKLLIKAGMVKQVSA---GVYTYLPLATRVIQKIEKV 62

Query: 283 MRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           +R +       E+  P +     W++SG WD     +  V     T +    +AL P   
Sbjct: 63  IREEHSKIGAAELLMPILQSDEYWKKSGRWDKMGEELIRV-----TDRKKAGYALSPTAE 117

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT-KEQM 400
                  N+ + SY++LP+ L +  + +R+E    L GL+R + F   DA+ F    E +
Sbjct: 118 EIVSQTVNNMVTSYKQLPMNLYQIQTKFRDEIRPRL-GLLRCKEFIMKDAYSFHDSPESL 176

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQ 460
                  +    SI+  F  +   V+  +       +      AE     ++ T ++   
Sbjct: 177 RETYKDYYQAYSSIFDRFELKYRAVQADSGNIGGSYTHEFQALAEVGEDTIVYTEESDYS 236

Query: 461 DRINT 465
             I T
Sbjct: 237 ANIET 241



 Score = 79.1 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 20/150 (13%), Positives = 54/150 (36%), Gaps = 8/150 (5%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL---SPIQ 554
           +        +  Y++++  + +   +     G       I+ ++      +W    +P Q
Sbjct: 420 LGKGYSEAMDVTYLDANG-RANHFYMGCYGIGVTRCISAIIEQHNDEKGIIWPKEVAPYQ 478

Query: 555 AIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
             +  +       V+ + E+   L +    +  D R E    K  +  +  IP+ ++ G 
Sbjct: 479 VHLVCVDVKKEDQVKLSDELYAQLTAAGYEVLYDDRAERAGVKFNDADLIGIPLQVVVGK 538

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           K A E  + ++   +       ++D +  +
Sbjct: 539 K-AGEGIVEVKERQTLEKVDTQVVDVLAKV 567


>gi|223040968|ref|ZP_03611229.1| prolyl-tRNA synthetase [Campylobacter rectus RM3267]
 gi|222877765|gb|EEF12885.1| prolyl-tRNA synthetase [Campylobacter rectus RM3267]
          Length = 570

 Score =  124 bits (311), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 45/221 (20%), Positives = 87/221 (39%), Gaps = 11/221 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++          +++    H+ L R        + GSG+  +   G ++ + + + ++ 
Sbjct: 3   FSKLYAPTAKEAPKDASLASHKFLLRAGYA---EQVGSGLYNFLPLGKRVLENIKNIVKE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +   +EI+   V    LW++SG +D Y   +   K   +       F L P N    
Sbjct: 60  ELDEAGAQEISMSFVTSADLWRESGRFDVYGKELLRFKDRKEN-----DFVLSPTNEESV 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT-KEQMFNE 403
           VA+    + SY++LP+ L +  + +R+E      GL+R R F   D + F    E +  E
Sbjct: 115 VALVRGKVTSYKQLPLNLYQINTKFRDEARPRF-GLLRGREFLMKDGYSFHANAEDLDRE 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
              +      I+   G     V+  +      GS      A
Sbjct: 174 FDLMEKTYSKIFTRLGLNFRAVRADSGAIGGSGSKEFMVLA 214



 Score = 81.4 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 59/152 (38%), Gaps = 10/152 (6%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG-NLPLW---LSPI 553
           +        NA +++ +  K  P ++     G   R + + +E        +W   LSP 
Sbjct: 420 LGTKYSEPMNATFLDENG-KAKPFIMGCYGIGVS-RLVAVAVEAKHDEKGIIWNETLSPF 477

Query: 554 QAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           +  +          V++AQ +   L+   +S+  D RNE    K+ E  +   P  +I G
Sbjct: 478 KFEIIISNLKDEEGVKFAQGLYEDLREAGVSVLLDDRNERFGVKMSEFELMGFPYAVIVG 537

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            K  +E ++ +   G    + V   + +  L 
Sbjct: 538 -KGLAEGTVELVTRGGLVKETVKASEILARLK 568


>gi|44662847|gb|AAS47505.1| threonyl tRNA synthetase [Deinococcus grandis]
          Length = 144

 Score =  124 bits (311), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 56/145 (38%), Positives = 86/145 (59%), Gaps = 9/145 (6%)

Query: 72  VIRHSCAHIMAEAVQSIWPE-------VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEK 124
           + RHS  H+M+ AV   +         ++  +GP IE+G+Y DFD  +P   ++L +IEK
Sbjct: 1   IFRHSLGHVMSRAVGEYYKGKGYGADAIKRGVGPSIENGWYQDFDLPEPLKEEDLPEIEK 60

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
            M++II R   F ++ +S   A  L +   + YK E++  +P  E +T Y QG++ DLCR
Sbjct: 61  IMRDIITRGLDFTRREISK--AEGLAQFPHDPYKQELIAGLPEDEPITFYTQGDYTDLCR 118

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWR 209
           GPH  +TG++   FKLM  +GAYWR
Sbjct: 119 GPHFPNTGKLPGAFKLMSTSGAYWR 143


>gi|81428868|ref|YP_395868.1| prolyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
 gi|114152205|sp|Q38W72|SYP_LACSS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|78610510|emb|CAI55561.1| Prolyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
          Length = 569

 Score =  124 bits (311), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 45/221 (20%), Positives = 94/221 (42%), Gaps = 11/221 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +         +E + HR + R      I +  +GV  +    +++ + + + ++ +
Sbjct: 4   SKLFIPTLKEVPNSAEAKSHRMMLRAGY---IHQVSAGVYSYLPLAYRVLENIQAIIKDE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +   D  ++  P +L   LW++SG + +Y  N+F  K      +  R F L P +     
Sbjct: 61  MSKIDAVQMQMPGILPAELWEESGRYATYGPNLFKFKD-----RHSRDFILGPTHEETFA 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +  + +KSY++LP+ L +  + YR+E     +GL+R R F   DA+ F   E   +   
Sbjct: 116 DLVRNNIKSYKKLPLTLYQIQTKYRDEDRPR-YGLLRGREFIMQDAYSFSANEADLDTTF 174

Query: 406 -KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
            ++     +I++  G +   +           S      AE
Sbjct: 175 QQMRQAYTNIFERCGLDFRAIVGDAGAMGGKDSMEFSAIAE 215



 Score = 85.2 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 41/185 (22%), Positives = 74/185 (40%), Gaps = 16/185 (8%)

Query: 466 GVLLGEGAFYGP-KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIH 524
            V  GE A  G  K ++     IG  ++ GT         +F A +++ +  +  P+++ 
Sbjct: 386 FVQEGETAPDGEGKLQFTKGIEIGHIFKLGT-----RYTEQFGATFLDENG-RAKPIIMG 439

Query: 525 RAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKS 577
               G   R +  + E          P  ++P    V  +     + VE A++I  LL+ 
Sbjct: 440 SYGIGVS-RLLSAITEQQADENGLVWPSAIAPYDLHVVPVNVKDDAQVELAEQIEGLLEE 498

Query: 578 HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
              S+  D R E    K  +  +  +PI I  G K A E  + ++   +  T +V   + 
Sbjct: 499 AGYSVLVDDRKERAGVKFADSDLIGLPIRITVGKKAAEE-IVEVKLRKTGETLEVKKDEL 557

Query: 638 IPILT 642
           I  L+
Sbjct: 558 INSLS 562


>gi|259503119|ref|ZP_05746021.1| proline-tRNA ligase [Lactobacillus antri DSM 16041]
 gi|259168985|gb|EEW53480.1| proline-tRNA ligase [Lactobacillus antri DSM 16041]
          Length = 578

 Score =  124 bits (311), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 51/306 (16%), Positives = 118/306 (38%), Gaps = 22/306 (7%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++E   H  + R   ++ I+    GV  +    +++ + +   ++ +
Sbjct: 4   SKLLIPTKKENPSDAEALSHIMMERAGYIYQISA---GVWAYLPLAYRVIRKVKGIIQEE 60

Query: 287 IK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++     E+ TP +L   LW+Q+G +++Y   ++  K  +D     R + L P +     
Sbjct: 61  MEKAGAYEMETPSMLPADLWRQTGRYEAYGDTLYKFKDHND-----REYILGPTDEEAMT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    +KSY++LP+ + +    +RNEP    +G++R + F+  DA+ F   E+  +E  
Sbjct: 116 EILRDSVKSYKKLPLVVYQITDKFRNEPRPR-YGVLRGKEFSMLDAYSFAADEEGLDEAY 174

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
           +      + +  F    +  K+       +G D   + +      + + +   +      
Sbjct: 175 QA--QAKAYHNIFDRAGLHYKVILADSGTIGGDNSQEFS--APAEIGEDVIVYTDGGYAA 230

Query: 466 GVLLGEGAFYGP-------KFEYILKDAIGR-DWQCGTIQVDFNLPSRFNAFYVNSHSEK 517
            +      F          K E          D  C ++ VD     +   +      + 
Sbjct: 231 NLEKATAKFDAVQQTAEPGKLEKKATPGAHTVDEACASLGVDQGQMIKSMLYMAKMGEDD 290

Query: 518 CHPVMI 523
             PVM+
Sbjct: 291 YQPVMV 296



 Score = 79.1 bits (193), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 65/182 (35%), Gaps = 15/182 (8%)

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
           V  GE A  G   ++     IG  ++ GT         +  A  ++ +  +   +++   
Sbjct: 391 VQEGEIAPDGYPIKFTNGIEIGHIFKLGT-----GYSKKLGAQVLDKNG-RLVDMIMGCY 444

Query: 527 VFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHH 579
             G   R +  + E          P  ++P    V  +       +  A E+   L +  
Sbjct: 445 GIGVT-RMLSAVAEQNADENGLVWPDSIAPFDVHVIPVNAKKDEQMAMANELEQQLTAAG 503

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
             +  D R E    K  +  +  IP+ +  G K A++  + ++   +  T +V   + + 
Sbjct: 504 YEVLVDDRKERAGVKFADSDLIGIPLRVTVGKK-AADGIVEVKIRKTGETLEVKQEELVN 562

Query: 640 IL 641
            +
Sbjct: 563 TV 564


>gi|241895744|ref|ZP_04783040.1| prolyl-tRNA synthetase [Weissella paramesenteroides ATCC 33313]
 gi|241870787|gb|EER74538.1| prolyl-tRNA synthetase [Weissella paramesenteroides ATCC 33313]
          Length = 570

 Score =  124 bits (310), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 41/216 (18%), Positives = 87/216 (40%), Gaps = 11/216 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++E   H+ + R   +  +    +GV  +     ++   + + +R +
Sbjct: 4   SKVFIPTLRETPADAEVISHQMMLRAGYVRQV---TAGVYAYLPLAQRVLNKINAIIREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++  D  E+  P +L   LW++SG +++Y  N+F +K      +  R   L P +     
Sbjct: 61  MEKIDAIEMTAPVLLPAELWEESGRYETYGPNLFKLKN-----RHGRDMILGPTHEETMT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    +KSY+ LP+ L +  +  R+E       L R R F   DA+ F   E   ++  
Sbjct: 116 TLIRDDIKSYKRLPLTLYQIQTKLRDEDRPRFGVL-RGREFIMKDAYSFSIDEAGLDDAY 174

Query: 406 -KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            K+    ++I+   G    ++           S   
Sbjct: 175 KKMETAYVNIFDRVGLNYRVIVGDAGAMGGSDSKEF 210



 Score = 72.9 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 57/173 (32%), Gaps = 9/173 (5%)

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           P  +        +  + G I       S+     V   + +   V++     G   R + 
Sbjct: 392 PAIDNKGHLQFTKGIEVGHIFKLGTRYSKSMGAQVLDANGRQADVIMGSYGIGVS-RLLA 450

Query: 537 IMIENFKGN----LPLWLSPIQAIVTTITSSAVEYAQ---EIANLLKSHHLSIETDFRNE 589
            + E          P  ++P    +  I       A+   ++   L +    +  D RNE
Sbjct: 451 AIAEQNADEHGLSWPAAVAPWDVHLVPIKYKDETQAKLTDDLNESLVAAGYEVLVDDRNE 510

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
               K  +  +  +P+ +  G K AS+  + ++   +    +V   + +  L 
Sbjct: 511 RPGVKFADSDLIGLPVRVTVGKK-ASDGIVEVKLRQADEAIEVRADELVSTLQ 562


>gi|312864390|ref|ZP_07724623.1| proline--tRNA ligase [Streptococcus downei F0415]
 gi|311100111|gb|EFQ58322.1| proline--tRNA ligase [Streptococcus downei F0415]
          Length = 633

 Score =  124 bits (310), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 48/262 (18%), Positives = 102/262 (38%), Gaps = 26/262 (9%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  +        +++   H  + R   +  +    +GV  +     ++ +   + MR +
Sbjct: 18  SQMLIPTLREMPSDAQVISHALMVRAGYVRQV---TAGVYSYLPLANRVIEKFKTIMREE 74

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
                  E+  P +L   LW++SG +++Y  +++ +K      +D   F L P +     
Sbjct: 75  FDKIGAVEMLAPALLTADLWKESGRYETYGDDLYKLKN-----RDQAEFILGPTHEETFT 129

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           A+    +KSY++LP+ L +  + YR+E     +GL+R R F   D + F       +E  
Sbjct: 130 ALVRDSIKSYKQLPMNLYQIQAKYRDEKRPR-NGLLRTREFIMKDGYSFHANYDSLDEAY 188

Query: 406 KIHNLIISIYKD---------FGFEKIMVKLSTRPEKRVGSD----ALW---DDAENIMK 449
           + +                   G    M    ++    V  D      W   D + + + 
Sbjct: 189 EAYRQAYEAIFTRAGLDFKGIIGDGGAMGGKDSQEFMAVTPDRTDLDHWVVLDKSISSLD 248

Query: 450 GVLDTIKNSSQDRINTGVLLGE 471
            + + +    +D +N  ++ GE
Sbjct: 249 EIPEDVLAQIKDELNKWLVSGE 270



 Score = 70.6 bits (171), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 49/245 (20%), Positives = 94/245 (38%), Gaps = 42/245 (17%)

Query: 439 ALWDDAENIMKGVLDTIKNSSQDRI-NTGVLLGEGAFYGPKFEYILK---------DAIG 488
            +   A+  ++ V + +  ++QD    TGV  G    + PK    ++         D  G
Sbjct: 393 EVTIIADRKVQDVANAVAGANQDGYHLTGVNPGRD--FSPKDYVDIREVKEGEPSPDGQG 450

Query: 489 -----RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE--- 540
                R  + G I       S      +   + +  P+++     G   R +  +IE   
Sbjct: 451 TLKFARGIEIGHIFKLGTRYSDSMGANILDENGRSIPIIMGCYGIGVS-RILSAVIEQHA 509

Query: 541 --------------NFKGNLPLWLSPIQAIVTTITSS---AVEYAQEIANLLKSHHLSIE 583
                         ++  N P  L+P    + T+ +    A +    + + L      + 
Sbjct: 510 RLFVNKTPKGAYRFSWGINFPKELAPFDVHLITVNTKDQVAQDLTANLESQLVKAGYQVL 569

Query: 584 TDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV---SLLDAIPI 640
           TD RNE +  K  +  +  +PI +  G K A+E  + ++   +  T +V   +LL+ + I
Sbjct: 570 TDDRNERVGSKFSDSDLIGLPIRVTVGKK-AAEGIVEVKIKATGDTIEVNAQNLLETLTI 628

Query: 641 LTKES 645
           LTKE+
Sbjct: 629 LTKEA 633


>gi|324992477|gb|EGC24398.1| proline--tRNA ligase [Streptococcus sanguinis SK405]
 gi|324995993|gb|EGC27904.1| proline--tRNA ligase [Streptococcus sanguinis SK678]
 gi|327460709|gb|EGF07044.1| proline--tRNA ligase [Streptococcus sanguinis SK1]
 gi|327472430|gb|EGF17861.1| proline--tRNA ligase [Streptococcus sanguinis SK408]
          Length = 616

 Score =  123 bits (309), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 45/250 (18%), Positives = 93/250 (37%), Gaps = 16/250 (6%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  ++    GV  +     ++ +     MR +
Sbjct: 4   SKMLIPTLREMPSDAQVISHALMLRAGYVRQVSA---GVYSYLPLANRVIEKAKKIMREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
                  E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     
Sbjct: 61  FDKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           A+    +KSY++LP+ L +    YR+E     +GL+R R F   DA+ F       +   
Sbjct: 116 AIVRDSVKSYKQLPLNLYQIQPKYRDEKRPR-NGLLRTREFIMKDAYSFHANYDSLDVAY 174

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD-----ALWDDAENIMKGVLDTIKNSSQ 460
             +                  +        G D     A+  D  ++ + V+     +S 
Sbjct: 175 DEYKSAYEKIFTRSELDFKAIIGDGGAMG-GKDSQEFMAITPDRTDLNRWVVLDKSVASF 233

Query: 461 DRINTGVLLG 470
           D I   V   
Sbjct: 234 DEIPEEVQEA 243



 Score = 66.7 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 59/173 (34%), Gaps = 20/173 (11%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S      V   + +  P+++     G       +M ++       
Sbjct: 441 RGIEIGHIFKLGTRYSDSMNANVLDENGRAVPMIMGCYGIGVSRLLSAVMEQHARLFVNK 500

Query: 542 ---------FKGNLPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNE 589
                    +  N P  L+P    +  +      A+    +I   L S    +  D RNE
Sbjct: 501 TPKGEFRYAWGINFPKELAPFDVHLIPVNIKDEEALALTNQIEANLLSAGYEVLVDDRNE 560

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
               K  +  +  +PI +  G K A+E  + ++   +  T +V   + +  L+
Sbjct: 561 RAGVKFSDSDLIGLPIRVTVGKK-AAEGIVEVKIKATGDTIEVHADNLLETLS 612


>gi|312134434|ref|YP_004001772.1| aaa atpase [Caldicellulosiruptor owensensis OL]
 gi|311774485|gb|ADQ03972.1| AAA ATPase [Caldicellulosiruptor owensensis OL]
          Length = 554

 Score =  123 bits (309), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 40/204 (19%), Positives = 81/204 (39%), Gaps = 4/204 (1%)

Query: 38  AVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAI 96
            +A  ++ ++ +L   + R+  ++ I       + + R S   ++  A + ++ E  V +
Sbjct: 42  IIAAKVDNEIKELKYVISRDCKVKFIDMTQEDGMRIYRRSLIFVLIVATRMLFKEA-VNV 100

Query: 97  GPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEA 156
              +  G Y + +  +  SS ++  I++KM+ II +D  F ++ +S ++A +LFE K   
Sbjct: 101 QHSLSKGLYCEVE-NRKLSSQDVELIKQKMKWIIEQDFQFRREKVSKDEAVKLFEEKGFY 159

Query: 157 YKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPM 216
            K   +      E V +Y  G++ D   G  V STG +K F  +    G           
Sbjct: 160 DKARTI-KFSENEFVYIYYCGDYVDYFYGHLVPSTGYLKIFDLIQYHDGMVLLYPDKSDP 218

Query: 217 LSRIYGTAWNTQQELTQYLYFLEE 240
                         +         
Sbjct: 219 FKLQEFVENKKLFAVYHEYKNWGR 242


>gi|291235359|ref|XP_002737612.1| PREDICTED: AGAP008929-PA-like, partial [Saccoglossus kowalevskii]
          Length = 314

 Score =  123 bits (309), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 54/152 (35%), Positives = 88/152 (57%), Gaps = 7/152 (4%)

Query: 203 VAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDG 262
            +  YW G ++   L RIYG ++   ++L ++ +F EE+ KRDHRK+ R+ +L+   E  
Sbjct: 1   NSATYWEGKADAESLQRIYGISFPDTKQLKEWKHFQEEAAKRDHRKIGRDQELYFFHELS 60

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
            G  F+H KG  I+ TLI+Y++ + +   ++E+ +P + +  LW+ SGHW  Y  NMF+ 
Sbjct: 61  PGSCFFHPKGAHIYNTLINYIKSEYRTRGFQEVVSPNIYNSKLWETSGHWQHYAENMFSF 120

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           +       +   FALKPMNCPGH     +  +
Sbjct: 121 E------SEKEKFALKPMNCPGHWNTAKYACR 146


>gi|323142316|ref|ZP_08077148.1| phosphoribulokinase/uridine kinase family protein
           [Phascolarctobacterium sp. YIT 12067]
 gi|322413200|gb|EFY04087.1| phosphoribulokinase/uridine kinase family protein
           [Phascolarctobacterium sp. YIT 12067]
          Length = 553

 Score =  123 bits (309), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 44/256 (17%), Positives = 93/256 (36%), Gaps = 2/256 (0%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            +KL   +G I      +T   +A+ +S   A   V    NG+ CDL  P+  +G+++ +
Sbjct: 1   MLKLQLSNGQIIEVEEGSTLLPLAQRLSDKYASPIVMGLYNGEECDLQRPLTADGTVDFV 60

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
              +   + V   +   ++  A + ++P+V + +   +    Y   + E+  +++++  I
Sbjct: 61  EVNNSVGMRVYVRTLLFMLIAATKKLYPDVHLEVRNSLGSALYCKDNSERKLTAEDIRSI 120

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E+ M ++  R        L   +A ++  +      + +L  +P    +T+         
Sbjct: 121 EEYMHKMAERKESIKLLRLPKSEAIDMACAICSDDNLALLAQVPDDTVLTINLLEGVPGY 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
             GP     G V  F  L    G       N                +  Q         
Sbjct: 181 LFGPMCPDAGYVPCFELLPYADGVIINYPDNGNWQVLPPFVDQPRLNDAYQEAEEWSAMI 240

Query: 243 KRD-HRKLAREMDLFH 257
             +   KL + +DL +
Sbjct: 241 HCNTVGKLNKIIDLGY 256


>gi|288574387|ref|ZP_06392744.1| prolyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM 11002]
 gi|288570128|gb|EFC91685.1| prolyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM 11002]
          Length = 480

 Score =  123 bits (309), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 61/439 (13%), Positives = 156/439 (35%), Gaps = 63/439 (14%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
           + + +   ++   + +  + +  +L   A     ++     G+ +++ +     R  K+ 
Sbjct: 1   MARNITSRQQDYSQWYLDVIKVAELADYAPVRGCMVI-RPTGYSVWEEIQQVFDRAFKET 59

Query: 290 DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
            +     P ++     + ++ H + +      V  A     +     ++P +      ++
Sbjct: 60  GHVNAYFPVLIPSSFLEKEAEHVEGFSPECAVVTHAGGEELE-EPLVVRPTSETVIGHMY 118

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKI 407
           +  ++S+R+LP+ + ++ +V R E    L   +R   F   + H    +KE+   E  ++
Sbjct: 119 SKWIQSWRDLPLLINQWANVMRWEKRPRL--FLRTSEFLWQEGHTAHASKEEAIEETERM 176

Query: 408 HNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGV 467
             +   I  D+    ++  + +  E+  G++  +                          
Sbjct: 177 LEVYRRIMTDYLALPVVPGVKSEGERFPGAEETY-------------------------- 210

Query: 468 LLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAV 527
                       E ++ D   +  Q GT        S+  AF +   ++K          
Sbjct: 211 ----------TTETMMSD--MKALQAGTSHFLGQNFSK--AFNIQFQNKKEAMEYAWTTS 256

Query: 528 FGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSA-------VEYAQEIANLLK 576
           +G   R IG +I    ++    LP  ++P +  +  I+          +  A+E+A  ++
Sbjct: 257 WGVSTRLIGAVIMTHSDDDGLILPPRIAPTKVALLPISKDETMATGPLLSKARELAGKIE 316

Query: 577 S-HHLS-IETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
           S      I  D + +     +   H  K +P+ +  G+KE  + ++   R  +     + 
Sbjct: 317 SVIGDRTIVVDDQFHMRPGDRFFYHLQKGVPLRLELGEKEFEKGTVRAVRRDTGEKIDLP 376

Query: 634 LLDAIPILTK--ESLPPDC 650
                  + +  E++  D 
Sbjct: 377 WDGIETKVHELLETIQEDL 395


>gi|156937107|ref|YP_001434903.1| anticodon-binding domain-containing protein [Ignicoccus hospitalis
           KIN4/I]
 gi|156566091|gb|ABU81496.1| Anticodon-binding domain protein [Ignicoccus hospitalis KIN4/I]
          Length = 552

 Score =  123 bits (309), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 59/417 (14%), Positives = 133/417 (31%), Gaps = 60/417 (14%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTP 297
            +     +  +  R+           G        + ++     ++            T 
Sbjct: 159 QKVEHDPNVERFCRKFGFAEAEVTPRGFWTLLPHAYFMYLAFTVHV------------TS 206

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +    +   S            + C+D  ++       K +                 +
Sbjct: 207 VLQALEVPTISVKTPEVVRYGCDISCSDGFLRCDEFKEHKQVVE---------KYADPND 257

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYK 416
           LP  L E   ++R E         R + F      +F     +  +  L +H LI +  +
Sbjct: 258 LPFALFEQLLLFREE--EDTFPCYRTKEFHVPKVRIFVPSFSEASDVALTLHELIHTEAE 315

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
             G + ++    +        D +    +   +     +  S++  I+            
Sbjct: 316 KLGMKYVVSYTVSEELFEEAKDLIIKLVKRDNRCAYLRVVKSNEIFIDA----------- 364

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM-IHRAVFGSIERFI 535
              E  + +++G              P     + +         V  +  A  GS ERF 
Sbjct: 365 ---EMYVINSMG-------------YPVELGTWKMRKALMWGREVYSVSAAPLGSFERFA 408

Query: 536 GIMIENFK--------GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR 587
            ++ +             LP WLSPIQ  V   +   + YA  +A  L+   + ++ D R
Sbjct: 409 YVIFDKAAKDLKSGETPELPAWLSPIQVRVIPKSRDVLPYALTVAEELRERGIRVDVDDR 468

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           N  ++ K+++   + +P +++   +E     + + R  +   + VSL + I ++++E
Sbjct: 469 NVPLSRKLKDAGEEWVPFLLLIDKREEKLGRVILMRRKTNDREDVSLEEVIRVVSEE 525


>gi|15674109|ref|NP_268284.1| prolyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
 gi|81856528|sp|Q9CDT4|SYP_LACLA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|12725184|gb|AAK06225.1|AE006441_3 prolyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
          Length = 616

 Score =  123 bits (309), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 47/279 (16%), Positives = 102/279 (36%), Gaps = 33/279 (11%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  L R   +  ++    G+  +     ++ + L + MR +
Sbjct: 4   SKMLIPTLREMPSDAQVISHALLMRAGYVRQVSA---GIYAYLPLANRVLEKLKNIMREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
             +    E+  P +L   LW++SG +D+Y  +++ +K  D++      F L P +     
Sbjct: 61  FDEIGAVELLAPSLLTADLWRESGRYDTYGEDLYKLKNRDNS-----DFILGPTHEETMT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           ++    + SY++LP+ + +    +R+E     +GL+R R F   D + +   +   +E  
Sbjct: 116 SLVRDEITSYKKLPLNVYQIAPKFRDEKRPR-YGLLRGREFLMKDGYSYHADQDSLDETY 174

Query: 406 KIHNLIISIYKDFGFEKI---------MVKLSTRPEKRVGSD----ALW-------DDAE 445
             +        +               M    ++    +  D      W          E
Sbjct: 175 NDYKKAYEKIFERAGLNFKPIIADAGAMGGKDSQEFIAITDDRINLEKWLVLSKNITSIE 234

Query: 446 NIMKGVLDTIKNSSQDRI---NTGVLLGEGAFYGPKFEY 481
            I + VL  IK      +      ++  EG  Y    E 
Sbjct: 235 EIPESVLSEIKEELGKWLIAGEDTIVYAEGGDYAANIEM 273



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/172 (16%), Positives = 68/172 (39%), Gaps = 20/172 (11%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHS------EKCHPVMIHRAVFGSIERFIGIMIE- 540
           R  + G I  +        NA  ++++         C+ + + R +   +E+F  I +E 
Sbjct: 441 RGIEIGHIFKLGTRYTEAMNANILDANGRSIPMLMGCYGIGVSRLLSAILEQFARIYVEK 500

Query: 541 --------NFKGNLPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNE 589
                   ++  N P  L+P    +  +     +A+E   E+   L+     +  D RNE
Sbjct: 501 TPREEFKFSWSINFPKELAPFDIHLVPVNVKDEAAMELTSELEEKLRGKGYQVLVDDRNE 560

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
               K  +  +  +P+ +  G K A+E  + ++   +    +++  + +  +
Sbjct: 561 RAGVKFADSDLIGLPVRVTIGKK-AAEGVVEVKIRATGEVVEINKDELVNTI 611


>gi|281492788|ref|YP_003354768.1| prolyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
 gi|281376440|gb|ADA65926.1| Prolyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
          Length = 616

 Score =  123 bits (309), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 47/279 (16%), Positives = 102/279 (36%), Gaps = 33/279 (11%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  L R   +  ++    G+  +     ++ + L + MR +
Sbjct: 4   SKMLIPTLREMPSDAQVISHALLMRAGYVRQVSA---GIYAYLPLANRVLEKLKNIMREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
             +    E+  P +L   LW++SG +D+Y  +++ +K  D++      F L P +     
Sbjct: 61  FDEIGAVELLAPSLLTADLWRESGRYDTYGEDLYKLKNRDNS-----DFILGPTHEETMT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           ++    + SY++LP+ + +    +R+E     +GL+R R F   D + +   +   +E  
Sbjct: 116 SLVRDEITSYKKLPLNVYQIAPKFRDEKRPR-YGLLRGREFLMKDGYSYHADQDSLDETY 174

Query: 406 KIHNLIISIYKDFGFEKI---------MVKLSTRPEKRVGSD----ALW-------DDAE 445
             +        +               M    ++    +  D      W          E
Sbjct: 175 NDYKKAYEKIFERAGLNFKPIIADAGAMGGKDSQEFIAITDDRINLEKWLVLSKNITSIE 234

Query: 446 NIMKGVLDTIKNSSQDRI---NTGVLLGEGAFYGPKFEY 481
            I + VL  IK      +      ++  EG  Y    E 
Sbjct: 235 EIPESVLSEIKEELGKWLIAGEDTIVYAEGGDYAANIEM 273



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/172 (16%), Positives = 68/172 (39%), Gaps = 20/172 (11%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHS------EKCHPVMIHRAVFGSIERFIGIMIE- 540
           R  + G I  +        NA  ++++         C+ + + R +   +E+F  I +E 
Sbjct: 441 RGIEIGHIFKLGTRYTEAMNANILDANGRSIPMLMGCYGIGVSRLLSAILEQFARIYVEK 500

Query: 541 --------NFKGNLPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNE 589
                   ++  N P  L+P    +  +     +A+E   E+   L+     +  D RNE
Sbjct: 501 TPREEFKFSWSINFPKELAPFDIHLVPVNVKDEAAMELTSELEEKLRGKGYQVLVDDRNE 560

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
               K  +  +  +P+ +  G K A+E  + ++   +    +++  + +  +
Sbjct: 561 RAGVKFADSDLIGLPVRVTIGKK-AAEGVVEVKIRATGEVVEINKDELVNTI 611


>gi|326407711|gb|ADZ64782.1| prolyl-tRNA synthetase [Lactococcus lactis subsp. lactis CV56]
          Length = 616

 Score =  123 bits (309), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 47/279 (16%), Positives = 102/279 (36%), Gaps = 33/279 (11%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  L R   +  ++    G+  +     ++ + L + MR +
Sbjct: 4   SKMLIPTLREMPSDAQVISHALLMRAGYVRQVSA---GIYAYLPLANRVLEKLKNIMREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
             +    E+  P +L   LW++SG +D+Y  +++ +K  D++      F L P +     
Sbjct: 61  FDEIGAVELLAPSLLTADLWRESGRYDTYGEDLYKLKNRDNS-----DFILGPTHEETMT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           ++    + SY++LP+ + +    +R+E     +GL+R R F   D + +   +   +E  
Sbjct: 116 SLVRDEITSYKKLPLNVYQIAPKFRDEKRPR-YGLLRGREFLMKDGYSYHADQDSLDETY 174

Query: 406 KIHNLIISIYKDFGFEKI---------MVKLSTRPEKRVGSD----ALW-------DDAE 445
             +        +               M    ++    +  D      W          E
Sbjct: 175 NDYKKAYEKIFERAGLNFKPIIADAGAMGGKDSQEFIAITDDRINLEKWLVLSKNITSIE 234

Query: 446 NIMKGVLDTIKNSSQDRI---NTGVLLGEGAFYGPKFEY 481
            I + VL  IK      +      ++  EG  Y    E 
Sbjct: 235 EIPESVLSEIKEELGKWLIAGEDTIVYAEGGDYAANIEM 273



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/172 (16%), Positives = 68/172 (39%), Gaps = 20/172 (11%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHS------EKCHPVMIHRAVFGSIERFIGIMIE- 540
           R  + G I  +        NA  ++++         C+ + + R +   +E+F  I +E 
Sbjct: 441 RGIEIGHIFKLGTRYTEAMNANILDANGRSIPMLMGCYGIGVSRLLSAILEQFARIYVEK 500

Query: 541 --------NFKGNLPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNE 589
                   ++  N P  L+P    +  +     +A+E   E+   L+     +  D RNE
Sbjct: 501 TPREEFKFSWSINFPKELAPFDIHLVPVNVKDEAAMELTSELEEKLRGKGYQVLVDDRNE 560

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
               K  +  +  +P+ +  G K A+E  + ++   +    +++  + +  +
Sbjct: 561 RAGVKFADSDLIGLPVRVTIGKK-AAEGVVEVKIRATGEVVEINKDELVNTI 611


>gi|51102324|gb|AAT95875.1| prolyl-tRNA synthetase [Trichomonas vaginalis]
          Length = 506

 Score =  123 bits (309), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 60/424 (14%), Positives = 130/424 (30%), Gaps = 73/424 (17%)

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK 288
           Q      +  + +    + +L     +     D  G+  +   G+ +   ++        
Sbjct: 36  QRADLTFHVPKSNFSDWYEELMVTAGIVDKRWDIKGMPIFCSYGYTMHNEIMHLFEVAYS 95

Query: 289 DDYEEI-NTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA 346
                +   P  + +   + ++ H   +++  F                L+P +     +
Sbjct: 96  KIGVPMTQFPAFIPRSFLEAEADHVKGFQSECFW---------HEDEMCLRPTSETAMYS 146

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           +F   +K+  +LPV + +  +VYR E  G    L+RVR    ++AH              
Sbjct: 147 MFAKWVKTIEDLPVMVQQSCNVYRYETKG-TKPLIRVREIPWNEAHT------------- 192

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDT----IKNSSQDR 462
            H          G                     WD   +I+   L      ++    DR
Sbjct: 193 AHATPQEALDILGK-------------------FWDIVHDILTTKLSIDGLRLRRPDWDR 233

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
                    GA +    + ++    GR  Q           S+   F +    E  +   
Sbjct: 234 FP-------GAEFTDVLDVVMPC--GRVLQSVGAHYLGQHFSK--VFKIQVDGEFSY--- 279

Query: 523 IHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI----TSSAVEYAQEIANL 574
                 G   R +  ++    ++    +P  ++PIQ ++  I      + +    E+   
Sbjct: 280 --MTCIGVSTRCLAAVLSAHGDDKGLIIPTIIAPIQVVIVPILRKDNDALLAKVAEMKKE 337

Query: 575 LKSHHLSIETDFRN-ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
           L++  + +  D     +   K     +K +P+ I  G ++  +    +   G      V 
Sbjct: 338 LRAAGIRVHIDDDTTRSPGEKFYYWEMKGVPLRIEVGPRDLEKNECVLVVRGIEGKYSVH 397

Query: 634 LLDA 637
           L   
Sbjct: 398 LSAF 401


>gi|329767542|ref|ZP_08259065.1| prolyl-tRNA synthetase [Gemella haemolysans M341]
 gi|328835876|gb|EGF85598.1| prolyl-tRNA synthetase [Gemella haemolysans M341]
          Length = 566

 Score =  123 bits (308), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 43/226 (19%), Positives = 84/226 (37%), Gaps = 11/226 (4%)

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
           E   H+ L +   +  ++    GV        ++ Q +   +R + +     E+  P + 
Sbjct: 19  EATSHKLLIKAGMVKQVSA---GVYTHLPLATRVIQKIEKVIREEHEKIGAVELLMPILQ 75

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
               W++SG W+     +  V    +       +AL P          ++ + SY++LPV
Sbjct: 76  SDEYWKKSGRWNKMGDELIRVTDRKNAG-----YALSPTAEEIICQTVSNMVTSYKQLPV 130

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKDFG 419
            L +  + +R+E    L GL+R + F   D + F  T E +       +    +I+  F 
Sbjct: 131 NLYQIQTKFRDEIRPRL-GLLRCKEFIMKDGYSFHDTPESLRETYKDYYQAYSNIFDRFE 189

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
            +   VK  +       +      AE     +  T ++     I T
Sbjct: 190 LKYRAVKADSGNIGGSYTHEFQALAEVGEDTIAYTEESDYAANIET 235



 Score = 82.1 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 20/150 (13%), Positives = 54/150 (36%), Gaps = 8/150 (5%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL---SPIQ 554
           +        +  Y++++  + +   +     G       I+ ++      +W    +P Q
Sbjct: 414 LGKGYSESMDITYLDANG-RANHFYMGCYGIGVTRVISAIIEQHSDDKGIIWPKEVAPYQ 472

Query: 555 AIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
             +  +       V+ ++E+   L +    +  D R E    K  +  +  IP+ ++ G 
Sbjct: 473 VHLVCVDVKKEEQVKLSEELYAQLTAAGYEVLYDDRAERAGVKFNDADLIGIPLQVVVGK 532

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           K A E  + ++   +       + D +  +
Sbjct: 533 K-AGEGIVEVKERKTLEKVDTEVADVLAKV 561


>gi|9719727|gb|AAF97829.1|AC034107_12 Contains similarity to threonyl-tRNA synthetase from Arabidopsis
           thaliana gb|Y14329
          Length = 130

 Score =  123 bits (308), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 36/127 (28%), Positives = 64/127 (50%), Gaps = 8/127 (6%)

Query: 518 CHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKS 577
              V+IHRAV  S+ER   I++E +KG  P WLSP QAIV +++     YA ++ + +  
Sbjct: 3   ERSVLIHRAVLSSVERLFAILLEQYKGKFPFWLSPRQAIVCSVSEDYRSYADKVRDQIHE 62

Query: 578 HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
               ++ D  +  ++ K++E  +     I++ GD+EA    + +        + +S    
Sbjct: 63  AGYYVDVDTTDRNVSDKVQEAQVAHYNYILVVGDEEARTGQVTVWLRD----EMMS---- 114

Query: 638 IPILTKE 644
           I  L+ E
Sbjct: 115 IETLSDE 121


>gi|307292835|ref|ZP_07572681.1| Proline--tRNA ligase [Sphingobium chlorophenolicum L-1]
 gi|306880901|gb|EFN12117.1| Proline--tRNA ligase [Sphingobium chlorophenolicum L-1]
          Length = 527

 Score =  123 bits (308), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 68/406 (16%), Positives = 140/406 (34%), Gaps = 80/406 (19%)

Query: 270 RKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKC---- 323
             G+ I++ +   +  +IK   +E    P  +    ++ ++ H D +   M  V      
Sbjct: 59  PWGYGIWERMQKLLDDRIKATGHENCYFPLFIPLSYFEKEAEHVDGFAKEMAVVTHHRLI 118

Query: 324 -------ADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
                   D   K      ++P +     A F+  ++S+R+LPV + ++ +V R E    
Sbjct: 119 QKEGRLVPDPDAKLEEPLVVRPTSETVIGAAFSRWVQSWRDLPVLINQWANVVRWEMR-- 176

Query: 377 LHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
               +R   F   + H   +  ++   E LK+  +  S                      
Sbjct: 177 TRMFLRTAEFLWQEGHTAHSSVDEAMEETLKMLEVYRSF--------------------- 215

Query: 436 GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGT 495
                   AE  +   +   +    +R         GA      E +++D  G+  Q GT
Sbjct: 216 --------AEECVALPVIAGEKPENERFP-------GAVATYSIEAMMQD--GKALQAGT 258

Query: 496 IQVDFNLPSRF-NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWL 550
                 L + F +A  +   + +    +     +G   R IG +I    ++    +P  +
Sbjct: 259 SHF---LGTTFSSAQNIRFQNAEGQQELAQTTSWGMSTRMIGGLIMVHGDDDGLRVPPRV 315

Query: 551 SPIQAIVTTI------TSSAVEYAQEIANLLKSHH-----LSIETDFRNETINYKIREHS 599
           +P Q +V  +       ++ ++Y  E+   L         +    D R      K     
Sbjct: 316 APYQIVVVPMLRDTDEDAAVLDYCGELVTELNRQDVFREPVRALLDRRPAKAANKRWGWV 375

Query: 600 IKKIPIIIICGDKEASERSIGI-------RRFGSTTTQKVSLLDAI 638
            K  P++I  G ++ +  ++ +       R  G   +Q V+  D +
Sbjct: 376 KKGAPVVIEVGGRDVAGGNVSVIRRDRLYREDGKLDSQVVAKADFL 421


>gi|70938459|ref|XP_739899.1| hypothetical protein [Plasmodium chabaudi chabaudi]
 gi|56517239|emb|CAH81031.1| hypothetical protein PC000376.04.0 [Plasmodium chabaudi chabaudi]
          Length = 244

 Score =  123 bits (308), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 44/191 (23%), Positives = 81/191 (42%), Gaps = 33/191 (17%)

Query: 3   SDIKLTFPDGSIK-NFPVHATGSDVAESISRSLAKKAVAVAI------------------ 43
            +I +   DGSIK       T   +A  IS+ L++ ++   +                  
Sbjct: 57  KEINIELLDGSIKIGQKNVTTPYQIASQISKKLSENSIVAKVIYLDDVNLNLCDIEDEES 116

Query: 44  ---------NGKVCDLSDP-VREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQ 93
                     G + DL+ P +    I  +  + P    V  HS AHI+  +++ I+    
Sbjct: 117 EEKHEETSQEGILWDLNVPLIGNCKINFLGIDTPEGKKVFWHSSAHILGSSLEKIYGG-Y 175

Query: 94  VAIGPIIEDGFYYDFD-KEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFES 152
           + IGP + +GFYYD         SD+  +IE +  +++  +  F K   + E+  ELF+ 
Sbjct: 176 LTIGPALNEGFYYDIYLGNNSIVSDDYTKIENEYNKLVKENVEFEKMVCTKEEVLELFKY 235

Query: 153 KKEAYKVEILE 163
               +K+E+++
Sbjct: 236 --NPFKIELIK 244


>gi|313899944|ref|ZP_07833446.1| phosphoribulokinase/uridine kinase family protein [Clostridium sp.
           HGF2]
 gi|312955252|gb|EFR36918.1| phosphoribulokinase/uridine kinase family protein [Clostridium sp.
           HGF2]
          Length = 588

 Score =  123 bits (308), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 41/205 (20%), Positives = 92/205 (44%), Gaps = 4/205 (1%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEII 62
            ++L    G +K     A   ++ E+   ++ +   AV ++GK+ DL+  +++ G+++ I
Sbjct: 49  MLELKLKSGEVKQCEAGAYVHELLEAW--NVKEAVYAVTLDGKLHDLNYRIKKSGALDYI 106

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
             +      +   S   +   AV+S++P+ +V +   +  G Y + DKE      ++ +I
Sbjct: 107 YADSETGKLIYERSLNFLFIVAVRSLFPDARVRMEHALSGGQYCEIDKEGYCKPQDVRKI 166

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK+M+E+IA +    ++ ++  +A+  F+      K  +L         ++Y    + D 
Sbjct: 167 EKRMKELIAANEVIHRRVVATAEAQAYFDRLGMKNKANLLA-CRKSATSSIYTLCGYDDY 225

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAY 207
             G  +  T  +  F       G +
Sbjct: 226 FYGIMLPDTSYLTHFSIRFYAPGVW 250


>gi|300361905|ref|ZP_07058082.1| proline--tRNA ligase [Lactobacillus gasseri JV-V03]
 gi|300354524|gb|EFJ70395.1| proline--tRNA ligase [Lactobacillus gasseri JV-V03]
          Length = 565

 Score =  123 bits (308), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 42/216 (19%), Positives = 89/216 (41%), Gaps = 11/216 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++  + H+ + R   +  +    +GV  +   G+++ +   + +  +
Sbjct: 4   SKFFMPTLKEAPSDAVAKSHQLMLRGGYIRQV---TAGVYAYLPLGYRVLRKAENIIEEE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           + + +  E+  P +L   LWQ+SG +  Y A MF ++      +  R   L P +     
Sbjct: 61  MNNINVPEMIMPHLLPATLWQESGRYKKYGAEMFKLQD-----RHGRESLLGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNEC 404
            +    LKSY+++P+ L +  + +R+E      GL+R R F   D + F  T+EQ+  + 
Sbjct: 116 EIVAKNLKSYKQMPLALYQIQTKFRDENRPRF-GLLRGREFVMLDGYSFAATREQLDQQF 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
                  + I+   G     V   +       S   
Sbjct: 175 DDQKGAYLKIFNRAGVTVHPVIADSGTMGGKNSTEF 210



 Score = 77.1 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 59/159 (37%), Gaps = 8/159 (5%)

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL- 550
           + G I       ++        ++ K  PV++     G        + ++   N   W  
Sbjct: 407 EVGHIFKLGTYYTKTMGADFLDNNGKAKPVIMGSYGIGVTRMLSAAVEQHLTKNGIAWPK 466

Query: 551 --SPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPI 605
             +P    +  +     +  E A+++   L +    +  D RNE    K  +  +   P+
Sbjct: 467 EIAPFAIHLIQMKMKDETQTELAEKLEKELSTK-YDVLYDDRNERPGVKFNDADLVGAPL 525

Query: 606 IIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            I  G K A +  + ++R       ++S+ D   ++TKE
Sbjct: 526 RITIGRK-AKDGIVEVKRPTDEKATEISISDLDAMITKE 563


>gi|157165397|ref|YP_001466693.1| prolyl-tRNA synthetase [Campylobacter concisus 13826]
 gi|171855061|sp|A7ZD35|SYP_CAMC1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|112800481|gb|EAT97825.1| prolyl-tRNA synthetase [Campylobacter concisus 13826]
          Length = 566

 Score =  123 bits (308), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 47/229 (20%), Positives = 90/229 (39%), Gaps = 11/229 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++          +++    H+ L R      + + GSG+  +   G  +   +   ++ 
Sbjct: 3   FSKFYAPTTKEAPKDASLPSHQFLIRGG---FVEQIGSGLYNYLPLGKIMHDKISRVVKE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++ +    E++   V    LW+QSG ++ +   +   K   D       F + P N    
Sbjct: 60  EMNEAGALEVSFSVVTSGELWKQSGRYNVFGKELLRFKDRKDN-----DFVISPTNEEAA 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNE 403
           VA+    + SY++LP+ L +  + +R+E      GL+R R FT  D + F  +KE +  E
Sbjct: 115 VALVRGKVTSYKQLPLNLYQINTKFRDEARPRF-GLLRGREFTMKDGYSFHSSKEDLKRE 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
              +      I+   G     V+  +      GS      A N    +L
Sbjct: 174 FDLMEATYSKIFTRLGLNFRAVEADSGAIGGSGSKEFMVLASNGEDDIL 222



 Score = 88.3 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 34/165 (20%), Positives = 67/165 (40%), Gaps = 11/165 (6%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKG 544
           + +  + G I Q+     +  NA Y++ +  K  P ++     G I R I +MIE +   
Sbjct: 403 LSKGIEVGHIFQLGDKYSAAMNATYLDENG-KVKPFLMGCYGIG-ISRLIAVMIEASHDE 460

Query: 545 NLPLW---LSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
              +W    +P    +        + V++A E+   LK   +S+  D RNE    K+ + 
Sbjct: 461 KGCIWKKECAPFDVEIIISNLKDEAGVKFAFELYESLKKAGVSVIIDDRNERFGVKMNDF 520

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +   P  ++ G KE +   +        + + +   DA   + +
Sbjct: 521 ELIGFPYALLVG-KEFANGKVEFITRDGLSKETIEANDAFRKIKE 564


>gi|75523950|sp|Q7X2P1|SYP_SPHEL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|32188210|gb|AAP46176.1| putative prolyl-tRNA synthetase [Sphingomonas elodea]
          Length = 510

 Score =  123 bits (308), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 66/407 (16%), Positives = 138/407 (33%), Gaps = 80/407 (19%)

Query: 270 RKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKC---- 323
             G+ I++ +   +  +IK   +E    P  +    ++ ++ H D +   M  V      
Sbjct: 41  PWGYGIWERIQRLLDDRIKATGHENCYFPLFIPLSYFEKEAEHVDGFAKEMAVVTHHRLI 100

Query: 324 -------ADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
                   D   K      ++P +     A  +  ++S+R+LPV + ++ +V R E    
Sbjct: 101 QKDGRLVPDPEAKLEEPLVVRPTSETVIGAAMSRWVQSWRDLPVLINQWANVVRWEMR-- 158

Query: 377 LHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
               +R   F   + H    T E+   E  K+      +Y+DF                 
Sbjct: 159 TRMFLRTAEFLWQEGHTAHATVEEAQEETRKML----EVYRDF----------------- 197

Query: 436 GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGT 495
                   AE  +   +   +    +R         GA      E +++D  G+  Q GT
Sbjct: 198 --------AETCLAMPVVAGEKPENERFP-------GAVSTFSIEAMMQD--GKALQAGT 240

Query: 496 IQVDFNLPSRF-NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWL 550
                 L + F +A  +   + +    +     +G   R IG +I    ++    +P  +
Sbjct: 241 SHF---LGTTFSSAQDIKFQNSEGQFELAQTTSWGVSTRMIGGLIMVHGDDDGLRVPPMV 297

Query: 551 SPIQAIVTTITSSA------VEYAQEIA---NLLKSHHL--SIETDFRNETINYKIREHS 599
           +P Q ++  +          ++Y + +      L +         D +      K     
Sbjct: 298 APWQIVIVPMLRDQPEDAATIDYCKSLQAELAKLTALGEPVRALLDLKAVKAQTKRWGWV 357

Query: 600 IKKIPIIIICGDKEASERSIGI-------RRFGSTTTQKVSLLDAIP 639
            K  PI+I  G ++ +  ++ +       R  G   ++ +   D + 
Sbjct: 358 KKGAPIVIEVGGRDVAGGNVSVIQRNKLYREDGKLDSRIMPRGDFVA 404


>gi|262283493|ref|ZP_06061259.1| prolyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
 gi|262260984|gb|EEY79684.1| prolyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
          Length = 616

 Score =  123 bits (308), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 49/253 (19%), Positives = 99/253 (39%), Gaps = 16/253 (6%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  L R   +  ++    GV  +     ++ +   + MR++
Sbjct: 4   SKMLIPTLREMPSDAQVISHALLLRAGYVRQVSA---GVYSYLPLANRVIEKAKNIMRQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +     E+  P +L   LW++SG +++Y  ++F +K      ++   F L P +     
Sbjct: 61  FEKIGAVEMLAPALLSADLWRESGRYETYGDDLFKLKN-----REGSDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           A+    +KSY++LP+ L +    YR+E     +GL+R R F   DA+ F       +   
Sbjct: 116 ALVRDSVKSYKQLPLNLYQIQPKYRDEKRPR-NGLLRTREFIMKDAYSFHANYDSLDVTY 174

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD-----ALWDDAENIMKGVLDTIKNSSQ 460
             +                  +        G D     A+  D  ++ + ++     +S 
Sbjct: 175 DEYKSAYEKIFTRSEIDFKAIIGDGGAMG-GKDSQEFMAITPDRTDLDRWLVLDKSVASL 233

Query: 461 DRINTGVLLGEGA 473
           D I  GVL    A
Sbjct: 234 DEIPAGVLEAIKA 246



 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 59/173 (34%), Gaps = 20/173 (11%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S      V   + +  P+++     G       +M ++       
Sbjct: 441 RGIEIGHIFKLGTRYSDSMNATVLDENGRAVPLVMGCYGIGVSRLLSAVMEQHARLFVNK 500

Query: 542 ---------FKGNLPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNE 589
                    +  N P  L+P    +  +      ++    +I   L      +  D RNE
Sbjct: 501 TPKGEYRYAWGINFPKELAPFDVHLIPVNVKDEESLALTDKIEESLVGAGYEVLVDDRNE 560

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +  K  +  +  +PI +  G K A+E  + ++   S  T +V   + I  L+
Sbjct: 561 RVGVKFSDSDLIGLPIRVTVGKK-AAEGIVEVKIKASGDTIEVHADNLIETLS 612


>gi|293401596|ref|ZP_06645738.1| proline--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291304854|gb|EFE46101.1| proline--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 563

 Score =  123 bits (308), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 40/186 (21%), Positives = 83/186 (44%), Gaps = 8/186 (4%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
            I +  SG+      G ++ Q + + +R ++     +E+  P ++ + ++++SG  +++ 
Sbjct: 31  MIKKSSSGIYMIMPMGKRVLQKIETIVREEMDATGAQELLMPVLIPEEVYEKSGRREAFG 90

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
           ANMFA+K      +  + + + P +             SY++ P  L +  + +R+E   
Sbjct: 91  ANMFALKD-----RYQKRYVMGPTHEELFTIAATMKGSSYKDFPYNLYQIQTKFRDETRP 145

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
             +GL+RVR F   DA+ F   E+  +    K+ +    I +  G    +VK  T     
Sbjct: 146 R-YGLIRVREFIMKDAYSFDVDEESMHVSYMKMFHAYKKIMERLGLTYKIVKADTGAMGG 204

Query: 435 VGSDAL 440
             S+  
Sbjct: 205 SLSEEF 210



 Score = 79.4 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 24/152 (15%), Positives = 54/152 (35%), Gaps = 8/152 (5%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLS---PIQ 554
           +           Y +  + K HPV +    FG       I+ ++   +  +W +   P Q
Sbjct: 411 LGTKYAESLGLEYQDETN-KLHPVQMGCYGFGLGRAMAAIVEQHNDASGIIWPASVAPYQ 469

Query: 555 AIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
             +  +       +  A  +   L +  + +  D R E    K ++  +  IP  I  G 
Sbjct: 470 VAIVVVAIKDEEQMRVATALYEELSAAGIDVVLDDRKERPGVKFKDMELIGIPYRITVG- 528

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           + A +  +  R   ++  ++  + +    L +
Sbjct: 529 RGAVDGKVEFRARTASENEEWLISETKAKLME 560


>gi|125718857|ref|YP_001035990.1| prolyl-tRNA synthetase [Streptococcus sanguinis SK36]
 gi|152112958|sp|A3CQI5|SYP_STRSV RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|125498774|gb|ABN45440.1| Prolyl-tRNA synthetase, putative [Streptococcus sanguinis SK36]
          Length = 616

 Score =  123 bits (308), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 45/250 (18%), Positives = 93/250 (37%), Gaps = 16/250 (6%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  ++    GV  +     ++ +     MR +
Sbjct: 4   SKMLIPTLREMPSDAQVISHALMLRAGYVRQVSA---GVYSYLPLANRVIEKAKRIMREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
                  E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     
Sbjct: 61  FDKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           A+    +KSY++LP+ L +    YR+E     +GL+R R F   DA+ F       +   
Sbjct: 116 AIVRDSVKSYKQLPLNLYQIQPKYRDEKRPR-NGLLRTREFIMKDAYSFHANYDSLDVAY 174

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD-----ALWDDAENIMKGVLDTIKNSSQ 460
             +                  +        G D     A+  D  ++ + V+     +S 
Sbjct: 175 DEYKSAYEKIFTRSELDFKAIIGDGGAMG-GKDSQEFMAITPDRTDLNRWVVLDKSVASF 233

Query: 461 DRINTGVLLG 470
           D I   V   
Sbjct: 234 DEIPEDVQEA 243



 Score = 67.1 bits (162), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 59/173 (34%), Gaps = 20/173 (11%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S      V   + +  P+++     G       +M ++       
Sbjct: 441 RGIEIGHIFKLGTRYSDSMNANVLDENGRAVPMIMGCYGIGVSRLLSAVMEQHARLFVNK 500

Query: 542 ---------FKGNLPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNE 589
                    +  N P  L+P    +  +      A+    +I   L S    +  D RNE
Sbjct: 501 TPKGEFRYAWGINFPKELAPFDVHLIPVNVKDEEALALTDQIEANLLSAGYEVLVDDRNE 560

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
               K  +  +  +PI +  G K A+E  + ++   +  T +V   + +  L+
Sbjct: 561 RAGVKFSDSDLIGLPIRVTVGKK-AAEGIVEVKIKATGDTIEVHADNLLETLS 612


>gi|256851262|ref|ZP_05556651.1| prolyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260660686|ref|ZP_05861601.1| prolyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
 gi|282934730|ref|ZP_06339973.1| proline--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|297206129|ref|ZP_06923524.1| proline--tRNA ligase [Lactobacillus jensenii JV-V16]
 gi|256616324|gb|EEU21512.1| prolyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260548408|gb|EEX24383.1| prolyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
 gi|281301305|gb|EFA93606.1| proline--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|297149255|gb|EFH29553.1| proline--tRNA ligase [Lactobacillus jensenii JV-V16]
          Length = 565

 Score =  123 bits (308), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 44/198 (22%), Positives = 80/198 (40%), Gaps = 11/198 (5%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
            H+ + R   +  +    +GV  +   G+++ +     +  ++   +  E+  P +L   
Sbjct: 22  SHKIMIRGGYIRQV---TAGVYSYLPLGYRVLRKAERIIEEEMDRINVPEMIMPHLLPAT 78

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LWQ+SG +  Y   MF +K      +  R   L P +      +    LKSY+++P+ L 
Sbjct: 79  LWQESGRYYKYGDEMFKLKD-----RHGRDSLLGPTHEETFTEIIAKNLKSYKQMPLALY 133

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEK 422
           +  + +R+E      GL+R R F   D + F  TKEQ+  +          I+K  G   
Sbjct: 134 QIQTKFRDENRPRF-GLLRGREFVMLDGYSFAATKEQLDKQFDDQKAAYKRIFKRAGVTV 192

Query: 423 IMVKLSTRPEKRVGSDAL 440
             V   +       S   
Sbjct: 193 HPVIADSGTMGGKNSTEF 210



 Score = 64.8 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 24/153 (15%), Positives = 54/153 (35%), Gaps = 9/153 (5%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL---SPIQ 554
           +         A +++ +  K  PV++     G        + +N   +   W    +P  
Sbjct: 414 LGTYYTETMGADFLDQNG-KAQPVIMGSYGIGVTRMLSAAVEQNLTEHGVAWPKEIAPFA 472

Query: 555 AIVTTITSS---AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
             +  +        + A+ +          +  D RNE    K  +  +   P+ I  G 
Sbjct: 473 LHLIQMKMKDEVQTKLAESLYAKFSDK-YDVLYDDRNERAGVKFADADLVGAPLRITIGK 531

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K A++  + ++R       +V+L +   ++ KE
Sbjct: 532 K-AADGIVEVKRPLDEKASEVTLAELEALVAKE 563


>gi|168485970|ref|ZP_02710478.1| prolyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00]
 gi|183570860|gb|EDT91388.1| prolyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00]
          Length = 617

 Score =  123 bits (308), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 46/253 (18%), Positives = 97/253 (38%), Gaps = 16/253 (6%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  ++    GV  +     ++ +   + MR++
Sbjct: 4   SKMPIPTLREMPSDAQVISHALMLRAGYVRQVSA---GVYSYLPLANRVIEKAKNIMRQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +     E+ TP +L   LW++SG +++Y  +++ +K      ++   F L P +     
Sbjct: 61  FEKIGAVEMLTPALLSAELWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           A+    +KSY++LP+ L +    YR+E     +GL+R R F   DA+ F       +   
Sbjct: 116 AIVRDSVKSYKQLPLNLYQIQPKYRDEKRPR-NGLLRTREFIMKDAYSFHANYDSLDSVY 174

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD-----ALWDDAENIMKGVLDTIKNSSQ 460
             +                  +        G D     A+     ++ + V+     +S 
Sbjct: 175 DEYKAAYERIFTRSGLDFKAIIGDGGAMG-GKDSQEFMAITSARTDLDRWVVLDKSVASF 233

Query: 461 DRINTGVLLGEGA 473
           D I   V     A
Sbjct: 234 DEIPAEVQEEIKA 246



 Score = 66.3 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 62/173 (35%), Gaps = 22/173 (12%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S      V   + +  P+++     G       +M ++       
Sbjct: 441 RGIEIGHIFKLGTRYSASMGADVLDENGRAVPIIMGCYGIGVSRLLSAVMEQHARLFVNK 500

Query: 542 ---------FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKS----HHLSIETDFRN 588
                    +  N P  L+P    + T+     E AQ +   L++        + TD RN
Sbjct: 501 TPKGEYRYAWGINFPKELAPFDVHLITVNVKDEE-AQALTEKLEASLMGAGYEVLTDDRN 559

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           E +  K  +  +  +PI I  G K A++  + ++   +  T +V   + +  L
Sbjct: 560 ERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVKIKATGDTIEVHADNVLETL 611


>gi|238852615|ref|ZP_04643025.1| proline--tRNA ligase [Lactobacillus gasseri 202-4]
 gi|238834761|gb|EEQ26988.1| proline--tRNA ligase [Lactobacillus gasseri 202-4]
          Length = 565

 Score =  123 bits (308), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 43/216 (19%), Positives = 91/216 (42%), Gaps = 11/216 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++  + H+ + R   +  +    +GV  +   G+++ +   + +  +
Sbjct: 4   SKFFMPTLKEAPSDAVAKSHQLMLRGGYIRQV---TAGVYAYLPLGYRVLRKAENIIEEE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           + + +  E+  P +L   LWQ+SG +  Y A MF ++      +  R   L P +     
Sbjct: 61  MNNINVPEMIMPHLLPATLWQESGRYKKYGAEMFKLQD-----RHGRESLLGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNEC 404
            +    LKSY+++P+ L +  + +R+E      GL+R R F   D + F  T+EQ+  + 
Sbjct: 116 EIVAKNLKSYKQMPLALYQIQTKFRDENRPRF-GLLRGREFVMLDGYSFAATREQLDEQF 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
               +  + I+K  G     V   +       S   
Sbjct: 175 DDQKSAYLKIFKRAGVTVHPVIADSGTMGGKNSTEF 210



 Score = 77.5 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 58/159 (36%), Gaps = 8/159 (5%)

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL- 550
           + G I       ++        ++ K  PV++     G        + ++   N   W  
Sbjct: 407 EVGHIFKLGTYYTKTMGADFLDNNGKAKPVIMGSYGIGVTRMLSAAIEQHLTENGIAWPK 466

Query: 551 --SPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPI 605
             +P    +  +        E A+++   L +    +  D RNE    K  +  +   P+
Sbjct: 467 EIAPFDVHLIQMKMKDEDQTELAEKLEKELSTK-YDVLYDDRNERPGVKFNDADLVGAPL 525

Query: 606 IIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            I  G K A +  + ++R      ++V + D   ++TKE
Sbjct: 526 RITIGRK-AKDGIVEVKRPTDEKAKEVDISDLDAMITKE 563


>gi|32267225|ref|NP_861257.1| prolyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449]
 gi|81835913|sp|Q7VFF0|SYP_HELHP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|32263278|gb|AAP78323.1| prolyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449]
          Length = 588

 Score =  123 bits (308), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 47/241 (19%), Positives = 89/241 (36%), Gaps = 11/241 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  +       +++  + H+ L R      I + GSG+  +   G K+   +   ++ 
Sbjct: 3   FSQLFVNTLKESPKDAVLKSHQYLIRGG---FIQQIGSGIYNFLPLGKKLLDKVRFIVKE 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +EI    V    LW++SG ++ Y   +       +       F L P +    
Sbjct: 60  EMDKSGAQEILMGFVTPAELWRESGRYEQYGRELLRFVDRKEN-----EFVLGPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + +KSY++LP+ L +  S +R+E      GLMR R F   D + F +     N  
Sbjct: 115 THIAKNTIKSYKQLPLHLYQIHSKFRDELRPRF-GLMRGREFIMKDGYSFHSNYADLNRE 173

Query: 405 LKIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             +       I +  G E  +V+  +      GS      A      ++          I
Sbjct: 174 FDVMEATYKRILQRMGLEFKVVEADSGAIGGSGSKEFMVLAPCGEDTIVVCKGCEYGANI 233

Query: 464 N 464
            
Sbjct: 234 E 234



 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/165 (15%), Positives = 59/165 (35%), Gaps = 8/165 (4%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPL 548
           +  + G I    +  SR        +  K  P+++    FG       I+ +       +
Sbjct: 423 KGIEVGHIFKLGDKYSRAMNAQFLDNDGKTQPLIMGCYGFGISRILPAILEQKSDDLGCI 482

Query: 549 WLSPIQA----IVTTITSS--AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
           W   +      I+ + T      ++   +  +L +  + +  D R+E    K+++  +  
Sbjct: 483 WSKEVSVFDIAIIISNTKDSVQNDFGSALYEILSACGIDVLLDERDERFGVKMKDFELLG 542

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLP 647
               +I G K  +E  + + +       ++   D   IL +E L 
Sbjct: 543 FHSALIVG-KGLNEGKVELIKREGLKKYELCATDK-EILLEEILK 585


>gi|327488783|gb|EGF20582.1| proline--tRNA ligase [Streptococcus sanguinis SK1058]
          Length = 616

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 45/250 (18%), Positives = 93/250 (37%), Gaps = 16/250 (6%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  ++    GV  +     ++ +     MR +
Sbjct: 4   SKMLIPTLREMPSDAQVISHALMLRAGYVRQVSA---GVYSYLPLANRVIEKAKRIMREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
                  E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     
Sbjct: 61  FDKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           A+    +KSY++LP+ L +    YR+E     +GL+R R F   DA+ F       +   
Sbjct: 116 AIVRDSVKSYKQLPLNLYQIQPKYRDEKRPR-NGLLRTREFIMKDAYSFHANYDSLDAAY 174

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD-----ALWDDAENIMKGVLDTIKNSSQ 460
             +                  +        G D     A+  D  ++ + V+     +S 
Sbjct: 175 DEYKSAYEKIFTRSELDFKAIIGDGGAMG-GKDSQEFMAITPDRTDLNRWVVLDKSVASF 233

Query: 461 DRINTGVLLG 470
           D I   V   
Sbjct: 234 DEIPEDVQEA 243



 Score = 66.7 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 59/173 (34%), Gaps = 20/173 (11%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S      V   + +  P+++     G       +M ++       
Sbjct: 441 RGIEIGHIFKLGTRYSDSMNANVLDENGRAVPMIMGCYGIGVSRLLSAVMEQHARLFVNK 500

Query: 542 ---------FKGNLPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNE 589
                    +  N P  L+P    +  +      A+    +I   L S    +  D RNE
Sbjct: 501 TPKGEFRYAWGINFPKELAPFDVHLIPVNIKDEEALALTNQIEANLLSAGYEVLVDDRNE 560

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
               K  +  +  +PI +  G K A+E  + ++   +  T +V   + +  L+
Sbjct: 561 RAGVKFSDSDLIGLPIRVTVGKK-AAEGIVEVKIKATGDTIEVHADNLLETLS 612


>gi|290579880|ref|YP_003484272.1| putative prolyl-tRNA synthetase [Streptococcus mutans NN2025]
 gi|254996779|dbj|BAH87380.1| putative prolyl-tRNA synthetase [Streptococcus mutans NN2025]
          Length = 616

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 34/192 (17%), Positives = 77/192 (40%), Gaps = 10/192 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +   +        +++   H  + R   +  ++    G+  +     ++ + +   MR +
Sbjct: 4   SNMLIPTLREMPSDAQVISHALMVRAGYVRQVSA---GIYSYLPLAHRVIEKIKEIMREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
                  E+  P +L   LW++SG +++Y  +++ +K      +D   F L P +     
Sbjct: 61  FDKIGAVEMLAPALLTADLWRESGRYETYGEDLYKLKN-----RDQSDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    +KSY++LP+ L +  + YR+E     +GL+R R F   D + F       +   
Sbjct: 116 NLIRDAVKSYKQLPLNLYQIQAKYRDEKRPR-NGLLRTREFIMKDGYSFHADYDSLDATY 174

Query: 406 KIHNLIISIYKD 417
           + +         
Sbjct: 175 EDYRKAYEAIFT 186



 Score = 62.9 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/174 (18%), Positives = 64/174 (36%), Gaps = 22/174 (12%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG---- 544
           R  + G I       S      +   + +  P+++     G   R +  +IE        
Sbjct: 441 RGIEIGHIFKLGTRYSESMGSNILDENGRSIPIIMGSYGIGVS-RILSAVIEQNARIFVN 499

Query: 545 -------------NLPLWLSPIQAIVTTITSS---AVEYAQEIANLLKSHHLSIETDFRN 588
                        N P  L+P    + T+      + +   ++   L   H S+ TD RN
Sbjct: 500 KTPKGAYRFSWGVNFPKTLAPFDVHLITVNVKDEVSQQLTAKVEESLVDAHYSVLTDNRN 559

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           E I  K  +  +  +PI +  G K AS+  + ++   +  T +V+  + +  L+
Sbjct: 560 ERIGSKFSDSDLIGLPIRVTVGKK-ASDGIVEVKIKSTGDTIEVNAENLLETLS 612


>gi|332365115|gb|EGJ42878.1| proline--tRNA ligase [Streptococcus sanguinis SK1059]
          Length = 616

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 45/250 (18%), Positives = 93/250 (37%), Gaps = 16/250 (6%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  ++    GV  +     ++ +     MR +
Sbjct: 4   SKMLIPTLREMPSDAQVISHALMLRAGYVRQVSA---GVYSYLPLANRVIEKAKKIMREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
                  E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     
Sbjct: 61  FDKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           A+    +KSY++LP+ L +    YR+E     +GL+R R F   DA+ F       +   
Sbjct: 116 AIVRDSVKSYKQLPLNLYQIQPKYRDEKRPR-NGLLRTREFIMKDAYSFHANYDSLDVAY 174

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD-----ALWDDAENIMKGVLDTIKNSSQ 460
             +                  +        G D     A+  D  ++ + V+     +S 
Sbjct: 175 DEYKSAYEKIFTRSELDFKAIIGDGGAMG-GKDSQEFMAITPDRTDVNRWVVLDKSVASF 233

Query: 461 DRINTGVLLG 470
           D I   V   
Sbjct: 234 DEIPEDVQEA 243



 Score = 67.5 bits (163), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 59/173 (34%), Gaps = 20/173 (11%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S      V   + +  P+++     G       +M ++       
Sbjct: 441 RGIEIGHIFKLGTRYSDSMNANVLDENGRAVPMIMGCYGIGVSRLLSAVMEQHARLFVNK 500

Query: 542 ---------FKGNLPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNE 589
                    +  N P  L+P    +  +      AV    +I   L S    +  D RNE
Sbjct: 501 TPKGEFRYAWGINFPKELAPFDVHLIPVNVKDEDAVALTDQIEANLLSAGYEVLVDDRNE 560

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
               K  +  +  +PI +  G K A+E  + ++   +  T +V   + +  L+
Sbjct: 561 RAGVKFSDSDLIGLPIRVTVGKK-AAEGIVEVKIKATGDTIEVHADNLLETLS 612


>gi|116629465|ref|YP_814637.1| prolyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323]
 gi|282850819|ref|ZP_06260193.1| proline--tRNA ligase [Lactobacillus gasseri 224-1]
 gi|311110887|ref|ZP_07712284.1| proline--tRNA ligase [Lactobacillus gasseri MV-22]
 gi|122273597|sp|Q044C3|SYP_LACGA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|116095047|gb|ABJ60199.1| Prolyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323]
 gi|282557771|gb|EFB63359.1| proline--tRNA ligase [Lactobacillus gasseri 224-1]
 gi|311066041|gb|EFQ46381.1| proline--tRNA ligase [Lactobacillus gasseri MV-22]
          Length = 565

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 42/216 (19%), Positives = 90/216 (41%), Gaps = 11/216 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++  + H+ + R   +  +    +GV  +   G+++ +   + +  +
Sbjct: 4   SKFFMPTLKEAPSDAVAKSHQLMLRGGYIRQV---TAGVYAYLPLGYRVLRKAENIIEEE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           + + +  E+  P +L   LWQ+SG +  Y A MF ++      +  R   L P +     
Sbjct: 61  MNNINVPEMIMPHLLPATLWQESGRYKKYGAEMFKLQD-----RHGRESLLGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNEC 404
            +    LKSY+++P+ L +  + +R+E      GL+R R F   D + F  T+EQ+  + 
Sbjct: 116 EIVAKNLKSYKQMPLALYQIQTKFRDENRPRF-GLLRGREFVMLDGYSFAATREQLDEQF 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
               +  + I+   G     V   +       S   
Sbjct: 175 DDQKSAYLKIFNRAGVTVHPVIADSGTMGGKNSTEF 210



 Score = 75.2 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 59/159 (37%), Gaps = 8/159 (5%)

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL- 550
           + G I       ++        ++ K  PV++     G        + ++   N   W  
Sbjct: 407 EVGHIFKLGTYYTKTMGADFLDNNGKAKPVIMGSYGIGVTRMLSAAVEQHLTENGIAWPK 466

Query: 551 --SPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPI 605
             +P    +  +     +  E A+++   L +    +  D RNE    K  +  +   P+
Sbjct: 467 EIAPFDVHLIQMKMKDEAQTELAEKLEKELSTK-YDVLYDDRNERPGVKFNDADLVGAPL 525

Query: 606 IIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            I  G K A +  + ++R       +V++ D   ++TKE
Sbjct: 526 RITIGRK-AKDGIVEVKRPTDEKAMEVNISDLDAMITKE 563


>gi|332359971|gb|EGJ37785.1| proline--tRNA ligase [Streptococcus sanguinis SK1056]
          Length = 616

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 45/250 (18%), Positives = 93/250 (37%), Gaps = 16/250 (6%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  ++    GV  +     ++ +     MR +
Sbjct: 4   SKMLIPTLREMPSDAQVISHALMLRAGYVRQVSA---GVYSYLPLANRVIEKAKKIMREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
                  E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     
Sbjct: 61  FDKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           A+    +KSY++LP+ L +    YR+E     +GL+R R F   DA+ F       +   
Sbjct: 116 AIVRDSVKSYKQLPLNLYQIQPKYRDEKRPR-NGLLRTREFIMKDAYSFHANYDSLDAAY 174

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD-----ALWDDAENIMKGVLDTIKNSSQ 460
             +                  +        G D     A+  D  ++ + V+     +S 
Sbjct: 175 DEYKSAYEKIFTRSELDFKAIIGDGGAMG-GKDSQEFMAITPDRTDVNRWVVLDKSVASF 233

Query: 461 DRINTGVLLG 470
           D I   V   
Sbjct: 234 DEIPEDVQEA 243



 Score = 66.7 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 59/173 (34%), Gaps = 20/173 (11%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S      V   + +  P+++     G       +M ++       
Sbjct: 441 RGIEIGHIFKLGTRYSDSMNANVLDENGRAVPLIMGCYGIGVSRLLSAVMEQHARLFVNK 500

Query: 542 ---------FKGNLPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNE 589
                    +  N P  L+P    +  +      A+    +I   L S    +  D RNE
Sbjct: 501 TPKGEFRYAWGINFPKELAPFDVHLIPVNVKDEEALTLTDQIEANLLSAGYEVLVDDRNE 560

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
               K  +  +  +PI +  G K A+E  + ++   +  T +V   + +  L+
Sbjct: 561 RAGVKFSDSDLIGLPIRVTVGKK-AAEGIVEVKIKATGDTIEVHADNLLETLS 612


>gi|332359309|gb|EGJ37130.1| proline--tRNA ligase [Streptococcus sanguinis SK49]
          Length = 616

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 45/250 (18%), Positives = 93/250 (37%), Gaps = 16/250 (6%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  ++    GV  +     ++ +     MR +
Sbjct: 4   SKMLIPTLREMPSDAQVISHALMLRAGYVRQVSA---GVYSYLPLANRVIEKAKKIMREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
                  E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     
Sbjct: 61  FDKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           A+    +KSY++LP+ L +    YR+E     +GL+R R F   DA+ F       +   
Sbjct: 116 AIVRDSVKSYKQLPLNLYQIQPKYRDEKRPR-NGLLRTREFIMKDAYSFHANYDSLDVAY 174

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD-----ALWDDAENIMKGVLDTIKNSSQ 460
             +                  +        G D     A+  D  ++ + V+     +S 
Sbjct: 175 DEYKSAYEKIFTRSELDFKAIIGDGGAMG-GKDSQEFMAITPDRTDVNRWVVLDKSVASF 233

Query: 461 DRINTGVLLG 470
           D I   V   
Sbjct: 234 DEIPEDVQEA 243



 Score = 67.1 bits (162), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 58/173 (33%), Gaps = 20/173 (11%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S      V   + +  P+++     G       +M ++       
Sbjct: 441 RGIEIGHIFKLGTRYSDSMNANVLDENGRAVPLIMGCYGIGVSRLLSAVMEQHARLFVNK 500

Query: 542 ---------FKGNLPLWLSPIQAIVTTITSSAVEYA---QEIANLLKSHHLSIETDFRNE 589
                    +  N P  L+P    +  +     E      +I   L S    +  D RNE
Sbjct: 501 TPKGEFRYAWGINFPKELAPFDVHLIPVNVKDEEAVTLTDQIEANLLSAGYEVLVDDRNE 560

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
               K  +  +  +PI +  G K A+E  + ++   +  T +V   + +  L+
Sbjct: 561 RAGVKFSDSDLIGLPIRVTVGKK-AAEGIVEVKIKATGDTIEVHADNLLETLS 612


>gi|324989750|gb|EGC21693.1| proline--tRNA ligase [Streptococcus sanguinis SK353]
          Length = 616

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 45/250 (18%), Positives = 93/250 (37%), Gaps = 16/250 (6%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  ++    GV  +     ++ +     MR +
Sbjct: 4   SKMLIPTLREMPSDAQVISHALMLRAGYVRQVSA---GVYSYLPLANRVIEKAKKIMREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
                  E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     
Sbjct: 61  FDKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           A+    +KSY++LP+ L +    YR+E     +GL+R R F   DA+ F       +   
Sbjct: 116 AIVRDSVKSYKQLPLNLYQIQPKYRDEKRPR-NGLLRTREFIMKDAYSFHANYDSLDVAY 174

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD-----ALWDDAENIMKGVLDTIKNSSQ 460
             +                  +        G D     A+  D  ++ + V+     +S 
Sbjct: 175 DEYKSAYEKIFTRSELDFKAIIGDGGAMG-GKDSQEFMAITPDRTDLNRWVVLDKSVASF 233

Query: 461 DRINTGVLLG 470
           D I   V   
Sbjct: 234 DEIPEDVQEA 243



 Score = 67.5 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 59/173 (34%), Gaps = 20/173 (11%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S      V   + +  P+++     G       +M ++       
Sbjct: 441 RGIEIGHIFKLGTRYSDSMNANVLDENGRAVPMIMGCYGIGVSRLLSAVMEQHARLFVNK 500

Query: 542 ---------FKGNLPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNE 589
                    +  N P  L+P    +  +      AV    +I   L S    +  D RNE
Sbjct: 501 TPKGEFRYAWGINFPKELAPFDVHLIPVNVKDEDAVALTDQIEANLLSAGYEVLVDDRNE 560

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
               K  +  +  +PI +  G K A+E  + ++   +  T +V   + +  L+
Sbjct: 561 RAGVKFSDSDLIGLPIRVTVGKK-AAEGIVEVKIKATGDTIEVHADNLLETLS 612


>gi|327462766|gb|EGF09088.1| proline--tRNA ligase [Streptococcus sanguinis SK1057]
          Length = 616

 Score =  122 bits (307), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 45/251 (17%), Positives = 95/251 (37%), Gaps = 18/251 (7%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  ++    GV  +     ++ +     MR +
Sbjct: 4   SKMLIPTLREMPSDAQVISHALMLRAGYVRQVSA---GVYSYLPLANRVIEKAKRIMREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
                  E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     
Sbjct: 61  FDKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           A+    +KSY++LP+ L +    YR+E     +GL+R R F   DA+ F       +   
Sbjct: 116 AIVRDSVKSYKQLPLNLYQIQPKYRDEKRPR-NGLLRTREFIMKDAYSFHANYDSLDVAY 174

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA------ENIMKGVLDTIKNSS 459
             +       K F   ++  K        +G     +         ++ + V+     +S
Sbjct: 175 DEYKSAYE--KIFTRSELDFKAIIGDGGAMGGKDSQEFMAITPARTDLNRWVVLDKSVAS 232

Query: 460 QDRINTGVLLG 470
            D I   V   
Sbjct: 233 FDEIPEDVQEA 243



 Score = 67.1 bits (162), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 59/173 (34%), Gaps = 20/173 (11%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S      V   + +  P+++     G       +M ++       
Sbjct: 441 RGIEIGHIFKLGTRYSDSMNANVLDENGRAVPMIMGCYGIGVSRLLSAVMEQHARLFVNK 500

Query: 542 ---------FKGNLPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNE 589
                    +  N P  L+P    +  +      A+    +I   L S    +  D RNE
Sbjct: 501 TPKGEFRYAWGINFPKELAPFDVHLIPVNVKDEEALALTDQIEANLLSAGYEVLVDDRNE 560

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
               K  +  +  +PI +  G K A+E  + ++   +  T +V   + +  L+
Sbjct: 561 RAGVKFSDSDLIGLPIRVTVGKK-AAEGIVEVKIKATGDTIEVHADNLLETLS 612


>gi|300870022|ref|YP_003784893.1| prolyl-tRNA synthetase [Brachyspira pilosicoli 95/1000]
 gi|300687721|gb|ADK30392.1| prolyl-tRNA synthetase [Brachyspira pilosicoli 95/1000]
          Length = 571

 Score =  122 bits (307), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 46/238 (19%), Positives = 99/238 (41%), Gaps = 13/238 (5%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
            ++ + R      I+   +G+  +   G ++   + + +R ++      E   P ++ + 
Sbjct: 15  SNKLMIRAALARKIS---NGLYSYLPLGVRVLNKISNIIREEMDAIGSNECIMPILVSKE 71

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           L   SG W+ ++  +F +K  +D        A+ P +         + ++SY++LPV L 
Sbjct: 72  LLTPSGRWERFKKELFRLKDRNDV-----DMAMGPTHEEAFTITAQNEIQSYKDLPVTLY 126

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKDFGFEK 422
           +  + +R+E      G++R + FT  DA+ F  TKE +      +      I+K  G + 
Sbjct: 127 QIHTKFRDEIRPRF-GVIRSKEFTMKDAYSFHITKECLDKTYNDMSGAYTKIFKRMGLDT 185

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT--GVLLGEGAFYGPK 478
           + VK  +      GS+     +E   + ++   K + +  +     +   E   Y  K
Sbjct: 186 VSVKADSGAMGGEGSEEFMVLSEVGEETIIFCSKCNYRANVEKANVMEDEEAKSYTDK 243



 Score = 78.7 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/155 (19%), Positives = 64/155 (41%), Gaps = 9/155 (5%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPI 553
           +       FN   ++ +++   P+M    +   + R +  +IE    +     P+ ++P 
Sbjct: 408 LGDKYTQAFNFTVLDENNKAITPIMGCYGI--GVNRALASVIEQNYDDKGIIFPISVAPY 465

Query: 554 QAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           +AIV  I   T  + + A+EI   L +  +    D R E +  K+ +  +  +P+ II G
Sbjct: 466 EAIVVAIDKETEESFKKAEEIYKALSAIGVETMFDDRKERLGVKLNDCDLIGVPMRIIVG 525

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
            K      +  +      + +V L D +  +  + 
Sbjct: 526 KKSLERGVVEFKLRRDLESVEVKLEDIVEYVKAKK 560


>gi|323350534|ref|ZP_08086196.1| proline--tRNA ligase [Streptococcus sanguinis VMC66]
 gi|322123216|gb|EFX94901.1| proline--tRNA ligase [Streptococcus sanguinis VMC66]
          Length = 616

 Score =  122 bits (306), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 45/250 (18%), Positives = 93/250 (37%), Gaps = 16/250 (6%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  ++    GV  +     ++ +     MR +
Sbjct: 4   SKMLIPTLREMPSDAQVISHALMLRAGYVRQVSA---GVYSYLPLANRVIEKAKKIMREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
                  E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     
Sbjct: 61  FDKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           A+    +KSY++LP+ L +    YR+E     +GL+R R F   DA+ F       +   
Sbjct: 116 AIVRDSVKSYKQLPLNLYQIQPKYRDEKRPR-NGLLRTREFIMKDAYSFHANYDSLDVAY 174

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD-----ALWDDAENIMKGVLDTIKNSSQ 460
             +                  +        G D     A+  D  ++ + V+     +S 
Sbjct: 175 DEYKSAYEKIFTRSELDFKAIIGDGGAMG-GKDSQEFMAITPDRTDLNRWVVLDKSVASF 233

Query: 461 DRINTGVLLG 470
           D I   V   
Sbjct: 234 DEIPEDVQEA 243



 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 59/173 (34%), Gaps = 20/173 (11%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S      V   + +  P+++     G       +M ++       
Sbjct: 441 RGIEIGHIFKLGTRYSDSMNANVLDENGRAVPMIMGCYGIGVSRLLSAVMEQHARLFVNK 500

Query: 542 ---------FKGNLPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNE 589
                    +  N P  L+P    +  +      A+    +I   L S    +  D RNE
Sbjct: 501 TPKGEFRYAWGINFPKELAPFDVHLIPVNVKDEEALALTDQIEANLLSSGYEVLVDDRNE 560

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
               K  +  +  +PI +  G K A+E  + ++   +  T +V   + +  L+
Sbjct: 561 RAGVKFSDSDLIGLPIRVTVGKK-AAEGIVEVKIKATGDTIEVHADNLLETLS 612


>gi|227890230|ref|ZP_04008035.1| prolyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
 gi|227849232|gb|EEJ59318.1| prolyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
          Length = 565

 Score =  122 bits (306), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 42/216 (19%), Positives = 90/216 (41%), Gaps = 11/216 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++  + H+ + R   +  +    +GV  +   G+++ +   + +  +
Sbjct: 4   SKFFMPTLKEAPSDAVAKSHQLMLRGGYIRQV---TAGVYAYLPLGYRVLRKAENIIEEE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           + + +  E+  P +L   LWQ+SG +  Y A MF ++      +  R   L P +     
Sbjct: 61  MDNINVPEMIMPHLLPATLWQESGRYKKYGAEMFKLQD-----RHGRESLLGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNEC 404
            +    LKSY+++P+ L +  + +R+E      GL+R R F   D + F  T+EQ+  + 
Sbjct: 116 EIVAKNLKSYKQMPLALYQIQTKFRDENRPRF-GLLRGREFVMLDGYSFAATREQLDEQF 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
               +  + I+   G     V   +       S   
Sbjct: 175 DDQKSAYLKIFNRAGVTVHPVIADSGTMGGKNSTEF 210



 Score = 73.7 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/138 (18%), Positives = 54/138 (39%), Gaps = 8/138 (5%)

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL---SPIQAIVTTI---TSSAVE 566
            ++ K  PV++     G        + ++   N   W    +P    +  +     +  E
Sbjct: 428 DNNGKAKPVIMGSYGIGVTRMLSAAVEQHLTENGIAWPKEIAPFAIHLIQMKMKDETQTE 487

Query: 567 YAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS 626
            A+++   L +    +  D RNE    K  +  +   P+ I  G K A +  + ++R   
Sbjct: 488 LAEKLEKELSAK-YDVLYDDRNERPGVKFNDADLVGAPLRITIGRK-AKDGIVEVKRPMD 545

Query: 627 TTTQKVSLLDAIPILTKE 644
               +V++ D   ++TKE
Sbjct: 546 EKATEVNISDLDAVITKE 563


>gi|123434302|ref|XP_001308783.1| Anticodon binding domain containing protein [Trichomonas vaginalis
           G3]
 gi|121890480|gb|EAX95853.1| Anticodon binding domain containing protein [Trichomonas vaginalis
           G3]
          Length = 513

 Score =  122 bits (306), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 60/424 (14%), Positives = 130/424 (30%), Gaps = 73/424 (17%)

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK 288
           Q      +  + +    + +L     +     D  G+  +   G+ +   ++        
Sbjct: 43  QRADLTFHVPKSNFSDWYEELMVTAGIVDKRWDIKGMPIFCSYGYTMHNEIMHLFEVAYS 102

Query: 289 DDYEEI-NTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA 346
                +   P  + +   + ++ H   +++  F                L+P +     +
Sbjct: 103 KIGVPMTQFPAFIPRSFLEAEADHVKGFQSECFW---------HEDEMCLRPTSETAMYS 153

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           +F   +K+  +LPV + +  +VYR E  G    L+RVR    ++AH              
Sbjct: 154 MFAKWVKTIEDLPVMVQQSCNVYRYETKG-TKPLIRVREIPWNEAHT------------- 199

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDT----IKNSSQDR 462
            H          G                     WD   +I+   L      ++    DR
Sbjct: 200 AHATPQEALDILGK-------------------FWDIVHDILTTKLSIDGLRLRRPDWDR 240

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
                    GA +    + ++    GR  Q           S+   F +    E  +   
Sbjct: 241 FP-------GAEFTDVLDVVMPC--GRVLQSVGAHYLGQHFSK--VFKIQVDGEFSY--- 286

Query: 523 IHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI----TSSAVEYAQEIANL 574
                 G   R +  ++    ++    +P  ++PIQ ++  I      + +    E+   
Sbjct: 287 --MTCIGVSTRCLAAVLSAHGDDKGLIIPTIIAPIQVVIVPILRKDNDALLAKVAEMKKE 344

Query: 575 LKSHHLSIETDFRN-ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
           L++  + +  D     +   K     +K +P+ I  G ++  +    +   G      V 
Sbjct: 345 LRAAGIRVHIDDDTTRSPGEKFYYWEMKGVPLRIEVGPRDLEKNECVLVVRGIEGKYSVH 404

Query: 634 LLDA 637
           L   
Sbjct: 405 LSAF 408


>gi|328944571|gb|EGG38732.1| proline--tRNA ligase [Streptococcus sanguinis SK1087]
          Length = 616

 Score =  122 bits (306), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 45/250 (18%), Positives = 93/250 (37%), Gaps = 16/250 (6%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  ++    GV  +     ++ +     MR +
Sbjct: 4   SKMLIPTLREMPSDAQVISHALMLRAGYVRQVSA---GVYSYLPLANRVIEKAKKIMREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
                  E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     
Sbjct: 61  FDKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           A+    +KSY++LP+ L +    YR+E     +GL+R R F   DA+ F       +   
Sbjct: 116 AIVRDSVKSYKQLPLNLYQIQPKYRDEKRPR-NGLLRTREFIMKDAYSFHANYDSLDVAY 174

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD-----ALWDDAENIMKGVLDTIKNSSQ 460
             +                  +        G D     A+  D  ++ + V+     +S 
Sbjct: 175 DEYKSAYEKIFTRSELDFKAIIGDGGAMG-GKDSQEFMAITPDRTDLNRWVVLDKSVASF 233

Query: 461 DRINTGVLLG 470
           D I   V   
Sbjct: 234 DEIPEDVQEA 243



 Score = 67.1 bits (162), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 59/173 (34%), Gaps = 20/173 (11%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S      V   + +  P+++     G       +M ++       
Sbjct: 441 RGIEIGHIFKLGTRYSDSMNANVLDENGRAVPMIMGCYGIGVSRLLSAVMEQHARLFVNK 500

Query: 542 ---------FKGNLPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNE 589
                    +  N P  L+P    +  +      AV    +I   L S    +  D RNE
Sbjct: 501 TPKGEFRYAWGINFPKELAPFDVHLIPVNVKDEDAVALTDQIEANLLSAGYEVLVDDRNE 560

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
               K  +  +  +PI +  G K A+E  + ++   +  T +V   + +  L+
Sbjct: 561 RAGVKFSDSDLIGLPIRVTVGKK-AAEGIVEVKIKATGDTIEVHADNLLETLS 612


>gi|325686585|gb|EGD28611.1| proline--tRNA ligase [Streptococcus sanguinis SK72]
 gi|325697433|gb|EGD39319.1| proline--tRNA ligase [Streptococcus sanguinis SK160]
          Length = 616

 Score =  122 bits (306), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 45/250 (18%), Positives = 93/250 (37%), Gaps = 16/250 (6%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  ++    GV  +     ++ +     MR +
Sbjct: 4   SKMLIPTLREMPSDAQVISHALMLRAGYVRQVSA---GVYSYLPLANRVIEKTKKIMREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
                  E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     
Sbjct: 61  FDKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           A+    +KSY++LP+ L +    YR+E     +GL+R R F   DA+ F       +   
Sbjct: 116 AIVRDSVKSYKQLPLNLYQIQPKYRDEKRPR-NGLLRTREFIMKDAYSFHANYDSLDVAY 174

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD-----ALWDDAENIMKGVLDTIKNSSQ 460
             +                  +        G D     A+  D  ++ + V+     +S 
Sbjct: 175 DEYKSAYEKIFTRSELDFKAIIGDGGAMG-GKDSQEFMAITPDRTDLNRWVVLDKSVASF 233

Query: 461 DRINTGVLLG 470
           D I   V   
Sbjct: 234 DEIPEDVQEA 243



 Score = 67.1 bits (162), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 59/173 (34%), Gaps = 20/173 (11%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S      V   + +  P+++     G       +M ++       
Sbjct: 441 RGIEIGHIFKLGTRYSDSMNANVLDENGRAVPMIMGCYGIGVSRLLSAVMEQHARLFVNK 500

Query: 542 ---------FKGNLPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNE 589
                    +  N P  L+P    +  +      A+    +I   L S    +  D RNE
Sbjct: 501 TPKGEFRYAWGINFPKELAPFDVHLIPVNVKDEKALALTDQIEANLLSAGYEVLVDDRNE 560

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
               K  +  +  +PI +  G K A+E  + ++   +  T +V   + +  L+
Sbjct: 561 RAGVKFSDSDLIGLPIRVTVGKK-AAEGIVEVKIKATGDTIEVHADNLLETLS 612


>gi|42519365|ref|NP_965295.1| prolyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
 gi|81832202|sp|Q74IS2|SYP_LACJO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|41583653|gb|AAS09261.1| prolyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
          Length = 565

 Score =  122 bits (306), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 42/216 (19%), Positives = 90/216 (41%), Gaps = 11/216 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++  + H+ + R   +  +    +GV  +   G+++ +   + +  +
Sbjct: 4   SKFFMPTLKEAPSDAVAKSHQLMLRGGYIRQV---TAGVYAYLPLGYRVLRKAENIIEEE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           + + +  E+  P +L   LWQ+SG +  Y A MF ++      +  R   L P +     
Sbjct: 61  MDNINVPEMIMPHLLPATLWQESGRYKKYGAEMFKLQD-----RHGRESLLGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNEC 404
            +    LKSY+++P+ L +  + +R+E      GL+R R F   D + F  T+EQ+  + 
Sbjct: 116 EIVAKNLKSYKQMPLALYQIQTKFRDENRPRF-GLLRGREFVMLDGYSFAATREQLDEQF 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
               +  + I+   G     V   +       S   
Sbjct: 175 DDQKSAYLKIFNRAGVTVHPVIADSGTMGGKNSTEF 210



 Score = 71.7 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 54/138 (39%), Gaps = 8/138 (5%)

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL---SPIQAIVTTI---TSSAVE 566
            ++ K  PV++     G        + ++   N   W    +P    +  +     +  +
Sbjct: 428 DNNGKAKPVIMGSYGIGVTRMLSAAVEQHLTENGIAWPKEIAPFAIHLIQMKMKDETQTK 487

Query: 567 YAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS 626
            A+++   L +    +  D RNE    K  +  +   P+ I  G K A +  + ++R   
Sbjct: 488 LAEKLEKELSAK-YDVLYDDRNERPGVKFNDADLVGAPLRITIGRK-AKDGIVEVKRPMD 545

Query: 627 TTTQKVSLLDAIPILTKE 644
               +V++ D   ++TKE
Sbjct: 546 EKATEVNISDLDAVITKE 563


>gi|322386937|ref|ZP_08060561.1| proline--tRNA ligase [Streptococcus cristatus ATCC 51100]
 gi|321269219|gb|EFX52155.1| proline--tRNA ligase [Streptococcus cristatus ATCC 51100]
          Length = 616

 Score =  122 bits (306), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 46/253 (18%), Positives = 95/253 (37%), Gaps = 16/253 (6%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  ++    GV  +     ++ +     MR++
Sbjct: 4   SKMLIPTLREMPSDAQVISHALMLRAGYVRQVSA---GVYSYLPLANRVIEKAKKIMRQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
                  E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     
Sbjct: 61  FDKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           A+    +KSY++LP+ L +    YR+E     +GL+R R F   DA+ F       +   
Sbjct: 116 AIVRDSVKSYKQLPLNLYQIQPKYRDEKRPR-NGLLRTREFIMKDAYSFHANYDSLDVAY 174

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD-----ALWDDAENIMKGVLDTIKNSSQ 460
             +                  +        G D     A+  D  ++ + V+     +S 
Sbjct: 175 DEYKSAYEKIFTRSELDFKAIIGDGGAMG-GKDSQEFMAITPDRTDLNRWVVLDKSVASF 233

Query: 461 DRINTGVLLGEGA 473
           D I   V     A
Sbjct: 234 DEIPAEVQEEIKA 246



 Score = 66.7 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 59/173 (34%), Gaps = 20/173 (11%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S      V   + +  P+++     G       +M ++       
Sbjct: 441 RGIEIGHIFKLGTRYSDSMNANVLDENGRAVPMIMGCYGIGVSRLLSAVMEQHARLFVNK 500

Query: 542 ---------FKGNLPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNE 589
                    +  N P  L+P    +  +      A+    +I   L S    +  D RNE
Sbjct: 501 TPKGEFRYAWGINFPKELAPFDVHLIPVNVKDEEALALTDQIEANLLSAGYEVLVDDRNE 560

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
               K  +  +  +PI +  G K A+E  + ++   +  T +V   + +  L+
Sbjct: 561 RAGVKFSDSDLIGLPIRVTVGKK-AAEGIVEVKIKATGDTIEVHADNLLETLS 612


>gi|296448072|ref|ZP_06889975.1| prolyl-tRNA synthetase [Methylosinus trichosporium OB3b]
 gi|296254429|gb|EFH01553.1| prolyl-tRNA synthetase [Methylosinus trichosporium OB3b]
          Length = 514

 Score =  122 bits (306), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 72/437 (16%), Positives = 145/437 (33%), Gaps = 78/437 (17%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
            +E+  + ++ +  E DL   +     +I     G+ +++ + + + ++IK+  +E    
Sbjct: 9   RDENFAQWYQAVVAEADLAETSPVRGCMIV-KPWGYGVWELIQAALDKRIKETGHENCYF 67

Query: 297 PQVLDQHL-WQQSGHWDSYRANMFAVKCA-----------DDTIKDLRTFALKPMNCPGH 344
           P  +      Q++ H + +   M  V              D   K      ++P +    
Sbjct: 68  PLFIPMSFIAQEASHVEGFAKEMAVVTHHRLKSVDGKLVVDPDSKLEEPLIVRPTSETII 127

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
              F   + S+R+LPV + ++ +V R E        +R   F   + H     E      
Sbjct: 128 GDAFRRWVSSHRDLPVLINQWANVVRWEMR--TRLFLRTSEFLWQEGHTAHADEADA--- 182

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
                                +  TR    V      +  E+++   +   +    +R  
Sbjct: 183 ---------------------REETRKMLEVYR----EIVEDVLAVPVIAGEKPENERFP 217

Query: 465 TGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF-NAFYVNSHSEKCHPVMI 523
                  GA      E +++D  G+  Q GT      L + F +A  +            
Sbjct: 218 -------GAVNTYSIEAMMQD--GKALQAGTSHY---LGTNFAHAQNIRFQGASGELEFC 265

Query: 524 HRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTI------TSSAVEYAQEIAN 573
           H   +G   R +G +I    ++    LP  ++P Q +V  +       S  + Y + +  
Sbjct: 266 HTTSWGVSTRLVGGVIMTHGDDDGLRLPPAIAPKQIVVVPMLRDKPEDSEVLAYCEALKA 325

Query: 574 LLKS-----HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIG-IRR---F 624
            L         L    D +      K  + + +  PII+  G ++AS   +  IRR    
Sbjct: 326 DLDDLVALKAPLRAHVDKKPVRAANKRWDWARRGAPIILEIGPRDASNGMVTMIRRDRLR 385

Query: 625 GSTTTQK--VSLLDAIP 639
                    +   D + 
Sbjct: 386 DGDKIVSVGMPRADFLA 402


>gi|153956193|ref|YP_001396958.1| hypothetical protein CKL_3596 [Clostridium kluyveri DSM 555]
 gi|219856518|ref|YP_002473640.1| hypothetical protein CKR_3175 [Clostridium kluyveri NBRC 12016]
 gi|146349051|gb|EDK35587.1| Conserved hypothetical protein containing an uridine kinase domain
           [Clostridium kluyveri DSM 555]
 gi|219570242|dbj|BAH08226.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 571

 Score =  122 bits (306), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 52/239 (21%), Positives = 95/239 (39%), Gaps = 3/239 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI-EI 61
             +KL   +G   + P   +   + +          V   +NGK  + ++ ++E  I E 
Sbjct: 23  DMLKLKL-NGKDISVPFGTSLYKIFKDNYDICHIPIVLAKVNGKYYEFTNSLQESGIFET 81

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +  +DP        +   ++ +AV  ++PE +V I   +  G + +  K  P S +++  
Sbjct: 82  VDIKDPLGNKTYIRTLQFVLIKAVYDLFPEARVVIEHSLSKGIFGEIHKNTPLSREDIKL 141

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           I+ KM EII +D    K  +  E+A E+F S     K+ +L+ I A E V LY     +D
Sbjct: 142 IKDKMDEIIKKDMYIKKVEMKKEEAIEIFRSYHMEDKITLLKHINA-EKVKLYELDGRYD 200

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
              G    STG +K +  +    G   R        +      +     +       + 
Sbjct: 201 YFYGSMAFSTGVLKLYDIMYYEPGFILRYPVESDPYNLPEFLEYKKLSNIFYETKQWDN 259


>gi|329769169|ref|ZP_08260589.1| prolyl-tRNA synthetase [Gemella sanguinis M325]
 gi|328839388|gb|EGF88966.1| prolyl-tRNA synthetase [Gemella sanguinis M325]
          Length = 566

 Score =  122 bits (306), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 44/226 (19%), Positives = 84/226 (37%), Gaps = 11/226 (4%)

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
           E   H+ L +   +  ++    GV  +     K+ Q +   +R +       E+  P + 
Sbjct: 19  EAISHKLLIKAGMVKQVSA---GVYTYLPLATKVIQNIEKVIRDEHAKIGASELLMPILQ 75

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            +  W+QSG W      +  V    +       +AL P          ++ + SY++LPV
Sbjct: 76  SEDYWKQSGRWYKMGDELIRVTDRKNAG-----YALSPTAEEVICQTVSNMVTSYKQLPV 130

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT-KEQMFNECLKIHNLIISIYKDFG 419
            L +  + +R+E    L GL+R + F   D + F    E +       +    +I+  F 
Sbjct: 131 NLYQIQTKFRDEIRPRL-GLLRGKEFIMKDGYSFHDSPESLRETYNDYYQAYSNIFDRFE 189

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
            +   VK  +       +      AE     ++ T ++     I T
Sbjct: 190 LKYRAVKADSGNIGGSYTHEFQALAEVGEDTIVYTEESDYAANIET 235



 Score = 81.4 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 19/150 (12%), Positives = 53/150 (35%), Gaps = 8/150 (5%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL---SPIQ 554
           +        +  Y++++  + +   +     G       I+ ++   N  +W    +P Q
Sbjct: 414 LGKGYSESMDITYLDANG-RANHFYMGCYGIGVSRVISAIIEQHNDENGIIWPKEVTPYQ 472

Query: 555 AIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
             +  +       V+ ++E+   L      +  D R E    K  +  +  IP+ ++ G 
Sbjct: 473 VHLVCVDIKKEEQVKQSEELYKQLTEAGYEVLYDDRAERAGVKFNDADLIGIPLQVVVGK 532

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           K   +  + ++   +       + D +  +
Sbjct: 533 K-VGDGIVEVKERKTLEKVDTKVEDVLSKV 561


>gi|329667116|gb|AEB93064.1| prolyl-tRNA synthetase [Lactobacillus johnsonii DPC 6026]
          Length = 565

 Score =  122 bits (306), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 42/216 (19%), Positives = 90/216 (41%), Gaps = 11/216 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++  + H+ + R   +  +    +GV  +   G+++ +   + +  +
Sbjct: 4   SKFFMPTLKEAPSDAVAKSHQLMLRGGYIRQV---TAGVYAYLPLGYRVLRKAENIIEEE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           + + +  E+  P +L   LWQ+SG +  Y A MF ++      +  R   L P +     
Sbjct: 61  MDNINVPEMIMPHLLPATLWQESGRYKKYGAEMFKLQD-----RHGRESLLGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNEC 404
            +    LKSY+++P+ L +  + +R+E      GL+R R F   D + F  T+EQ+  + 
Sbjct: 116 EIVAKNLKSYKQMPLALYQIQTKFRDENRPRF-GLLRGREFVMLDGYSFAATREQLDEQF 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
               +  + I+   G     V   +       S   
Sbjct: 175 DDQKSAYLKIFNRAGVTVHPVIADSGTMGGKNSTEF 210



 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/138 (18%), Positives = 54/138 (39%), Gaps = 8/138 (5%)

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL---SPIQAIVTTI---TSSAVE 566
            ++ K  PV++     G        + ++   N   W    +P    +  +     +  E
Sbjct: 428 DNNGKAKPVIMGSYGIGVTRMLSAAVEQHLTENGIAWPKEIAPFAIHLIQMKMKDETQTE 487

Query: 567 YAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS 626
            A+++   L +    +  D RNE    K  +  +   P+ I  G K A +  + ++R   
Sbjct: 488 LAEKLEKELSAK-YDVLYDDRNERPGVKFNDADLVGAPLRITIGRK-AKDGIVEVKRPMD 545

Query: 627 TTTQKVSLLDAIPILTKE 644
               +V++ D   ++TKE
Sbjct: 546 EKATEVNISDLDAVITKE 563


>gi|293402254|ref|ZP_06646392.1| phosphoribulokinase family protein [Erysipelotrichaceae bacterium
           5_2_54FAA]
 gi|291304361|gb|EFE45612.1| phosphoribulokinase family protein [Erysipelotrichaceae bacterium
           5_2_54FAA]
          Length = 570

 Score =  122 bits (306), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 35/211 (16%), Positives = 84/211 (39%), Gaps = 6/211 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
           ++K+T     I             + I         A+  NGK+ D+   +  EG +  +
Sbjct: 33  NMKITLQ-QKIIEITKDTPVE---KLIPAEEKANVYAIVFNGKLHDVKYCLKEEGDLSFV 88

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
             +      +   S + +   AV  ++P+  V I   + +G + + +++   + +++ QI
Sbjct: 89  YADSEIGKQIYERSLSFLFIAAVHRLYPKAHVCIEHALSNGLFCEVEQQSYLTPEDVFQI 148

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E+ M+++   +   L+  +  ++A   FE+    +K  +L +    E  ++Y   +  D 
Sbjct: 149 EQTMKQMTREELAILRSVVPTKEAVAFFEACGMLHKASLLRN-RHSETSSIYHLEDVNDY 207

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSN 213
             G  + +T  +  F       G +     +
Sbjct: 208 FYGIMLPNTSYLTHFALRYYAPGIWLSPQEH 238


>gi|268319258|ref|YP_003292914.1| hypothetical protein FI9785_773 [Lactobacillus johnsonii FI9785]
 gi|262397633|emb|CAX66647.1| proS [Lactobacillus johnsonii FI9785]
          Length = 565

 Score =  122 bits (306), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 42/216 (19%), Positives = 90/216 (41%), Gaps = 11/216 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++  + H+ + R   +  +    +GV  +   G+++ +   + +  +
Sbjct: 4   SKFFMPTLKEAPSDAVAKSHQLMLRGGYIRQV---TAGVYAYLPLGYRVLRKAENIIEEE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           + + +  E+  P +L   LWQ+SG +  Y A MF ++      +  R   L P +     
Sbjct: 61  MDNINVPEMIMPHLLPATLWQESGRYKKYGAEMFKLQD-----RHGRESLLGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNEC 404
            +    LKSY+++P+ L +  + +R+E      GL+R R F   D + F  T+EQ+  + 
Sbjct: 116 EIVAKNLKSYKQMPLALYQIQTKFRDENRPRF-GLLRGREFVMLDGYSFAATREQLDEQF 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
               +  + I+   G     V   +       S   
Sbjct: 175 DDQKSAYLKIFNRAGVTVHPVIADSGTMGGKNSTEF 210



 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/138 (18%), Positives = 54/138 (39%), Gaps = 8/138 (5%)

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL---SPIQAIVTTI---TSSAVE 566
            ++ K  PV++     G        + ++   N   W    +P    +  +     +  E
Sbjct: 428 DNNGKAKPVIMGSYGIGVTRMLSAAVEQHLTENGIAWPKEIAPFAIHLIQMKMKDETQTE 487

Query: 567 YAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS 626
            A+++   L +    +  D RNE    K  +  +   P+ I  G K A +  + ++R   
Sbjct: 488 LAEKLEKELSAK-YDVLYDDRNERPGVKFNDADLVGAPLRITIGRK-AKDGIVEVKRPMD 545

Query: 627 TTTQKVSLLDAIPILTKE 644
               +V++ D   ++TKE
Sbjct: 546 EKATEVNISDLDAVITKE 563


>gi|294011681|ref|YP_003545141.1| prolyl-tRNA synthetase [Sphingobium japonicum UT26S]
 gi|292675011|dbj|BAI96529.1| prolyl-tRNA synthetase [Sphingobium japonicum UT26S]
          Length = 508

 Score =  122 bits (306), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 68/399 (17%), Positives = 137/399 (34%), Gaps = 73/399 (18%)

Query: 270 RKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKC---- 323
             G+ I++ +   +  +IK   +E    P  +    ++ ++ H D +   M  V      
Sbjct: 40  PWGYGIWERMQKLLDDRIKATGHENCYFPLFIPLSYFEKEAEHVDGFAKEMAVVTHHRLI 99

Query: 324 -------ADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
                   D   K      ++P +     A F+  ++S+R+LPV + ++ +V R E    
Sbjct: 100 QKDGRLVPDPDAKLEEPLVVRPTSETVIGAAFSRWVQSWRDLPVLINQWANVVRWEMR-- 157

Query: 377 LHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
               +R   F   + H      E+   E LK+      +Y+ F                 
Sbjct: 158 TRMFLRTAEFLWQEGHTAHASVEEAMEETLKML----EVYRGF----------------- 196

Query: 436 GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGT 495
                   AE  +   +   +    +R         GA      E +++D  G+  Q GT
Sbjct: 197 --------AEECVALPVIAGEKPENERFP-------GAVATYSIEAMMQD--GKALQAGT 239

Query: 496 IQVDFNLPSRF-NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWL 550
                 L + F +A  +   + +    +     +G   R IG +I    ++    +P  +
Sbjct: 240 SHF---LGTTFSSAQNIKFQNAEGQQELAQTTSWGMSTRMIGGLIMVHGDDDGLRVPPRI 296

Query: 551 SPIQAIVTTI------TSSAVEYAQEIANLLKSHH-----LSIETDFRNETINYKIREHS 599
           +P Q +V  +       ++ ++Y  ++   L         +    D R      K     
Sbjct: 297 APYQVVVVPMLRDTDEDAAILDYCGDLVAELNRQDVFREPVRALLDRRPAKAANKRWGWV 356

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
            K  PI+I  G ++ +  ++ + R      +   L   I
Sbjct: 357 KKGAPIVIEVGGRDVAGGNVSVIRRDRLYREDGKLDSRI 395


>gi|295698550|ref|YP_003603205.1| prolyl-tRNA synthetase [Candidatus Riesia pediculicola USDA]
 gi|291157056|gb|ADD79501.1| prolyl-tRNA synthetase [Candidatus Riesia pediculicola USDA]
          Length = 583

 Score =  122 bits (306), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 46/212 (21%), Positives = 95/212 (44%), Gaps = 12/212 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+    +   SE    R + R   +  ++   SG+ +W   G K+ + L S +R+
Sbjct: 3   TSQYLLSTLTDYQVNSEILSDRLMMRSGMIRKLS---SGIYYWLPTGVKVIEKLKSIIRK 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E ++P +    LW++SG  D Y   +F +       +  R F L P N    
Sbjct: 60  EMDSIGLIEFSSPLIQPMKLWKKSGRLDQYGEELFRIND-----RKSRPFILSPTNEESI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           + +  H ++SY++LP+ L +  + +R+E      G++R + F   DA+ F T  Q   + 
Sbjct: 115 IYLMKHEIQSYKQLPISLYQIRTKFRDELRPQF-GIIRSKEFIMKDAYSFHTNLQSLQKT 173

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
            ++  ++ +  + F    +  ++       +G
Sbjct: 174 YEM--MLDTYKRIFNRIGLDFRVILAENGFIG 203



 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 38/180 (21%), Positives = 70/180 (38%), Gaps = 17/180 (9%)

Query: 474 FYGPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-I 531
           FY    E I KD    + + G I Q+        NAF+ +   E+    +I    +G  I
Sbjct: 399 FYNENIEQIRKD----EIEIGHIFQIGNKYSRAMNAFFQDERGERK---LITMGCYGIGI 451

Query: 532 ERFIGIMIENFKG----NLPLWLSPIQAIVTTITSSAVEYAQEIANLL----KSHHLSIE 583
            R I  +IE          P  L+P Q  +  I        ++++N L    K ++  + 
Sbjct: 452 GRVIAAIIEQNHDINGIVWPDVLAPFQVAILPINMYKFNIVRKVSNDLYCDLKKNNFEVI 511

Query: 584 TDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            D R    +  +++  +  +P I+I   +     +I  R   + + + + L   +  L K
Sbjct: 512 FDDRQIGFSKMLKDIELIGVPNILIINKENLLSNNIIYRNRSNHSEEMIHLSCTLSFLKK 571


>gi|24380149|ref|NP_722104.1| prolyl-tRNA synthetase [Streptococcus mutans UA159]
 gi|81845206|sp|Q8DSJ9|SYP_STRMU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|24378150|gb|AAN59410.1|AE015006_3 putative prolyl-tRNA synthetase [Streptococcus mutans UA159]
          Length = 616

 Score =  122 bits (306), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 34/192 (17%), Positives = 76/192 (39%), Gaps = 10/192 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +   +        +++   H  + R   +  ++    G+  +     ++ + +   MR +
Sbjct: 4   SNMLIPTLREMPSDAQVISHALMVRAGYVRQVSA---GIYSYLPLAHRVIEKIKKIMREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
                  E+  P +L   LW++SG + +Y  +++ +K      +D   F L P +     
Sbjct: 61  FDKIGAVEMLAPALLTADLWRESGRYGTYGEDLYKLKN-----RDQSDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    +KSY++LP+ L +  + YR+E     +GL+R R F   D + F       +   
Sbjct: 116 NLIRDAVKSYKQLPLNLYQIQAKYRDEKRPR-NGLLRTREFIMKDGYSFHADYDSLDATY 174

Query: 406 KIHNLIISIYKD 417
           + +         
Sbjct: 175 EDYRKAYEAIFT 186



 Score = 62.9 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/174 (18%), Positives = 64/174 (36%), Gaps = 22/174 (12%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG---- 544
           R  + G I       S      +   + +  P+++     G   R +  +IE        
Sbjct: 441 RGIEIGHIFKLGTRYSESMGANILDENGRSIPIIMGSYGIGVS-RILSAVIEQNARIFVN 499

Query: 545 -------------NLPLWLSPIQAIVTTITSS---AVEYAQEIANLLKSHHLSIETDFRN 588
                        N P  L+P    + T+      + +   ++   L   H S+ TD RN
Sbjct: 500 KTPKGAYRFSWGVNFPKTLAPFDVHLITVNVKDEVSQQLTAKVEESLVDAHYSVLTDNRN 559

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           E I  K  +  +  +PI +  G K AS+  + ++   +  T +V+  + +  L+
Sbjct: 560 ERIGSKFSDSDLIGLPIRVTVGKK-ASDGIVEVKIKSTGDTIEVNAENLLETLS 612


>gi|302525268|ref|ZP_07277610.1| prolyl-tRNA synthetase [Streptomyces sp. AA4]
 gi|302434163|gb|EFL05979.1| prolyl-tRNA synthetase [Streptomyces sp. AA4]
          Length = 578

 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 63/363 (17%), Positives = 131/363 (36%), Gaps = 31/363 (8%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   HR L R   +  +A    G   W   G ++ + +   +R ++     +EI  P 
Sbjct: 15  DAEVPSHRLLVRAGYVRRVA---PGGYSWLPLGLRVLRRVEEVVREEMNAIGAQEIQFPA 71

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++ +  W  Y  N+F +K      +    + L P +             SY++ 
Sbjct: 72  LLPREPYEATNRWTEYGDNLFRLKD-----RKGADYLLGPTHEELFALTVKGEYSSYKDF 126

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKD 417
           PV L +  + YR+E      G++R R F   D++ F   ++      + H    I ++  
Sbjct: 127 PVTLYQIQTKYRDEARPR-AGILRGREFVMKDSYSFDLDDEGLERSYQAHRDAYIKLFDR 185

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
            G E ++V  ++       S+     AEN     + + ++     +   V     A   P
Sbjct: 186 LGIEYVIVAATSGAMGGSASEEFLAVAENGEDTFVRSTESGYAANVEAVVTPAPAA--RP 243

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER-FIG 536
             E + +  +       TI+      +        + ++    V++     G+ E   +G
Sbjct: 244 -IEGLPEAQVHHTPNTPTIETLVAFFNAAGLGREFTAADTLKNVLVKTRQPGAKEWELLG 302

Query: 537 IMI----ENFKGNLPLWLSPIQAIVTTITSSAVEYAQE---IA-----NLLKSHHLSIET 584
           I +    E     L   L P +  +        ++A+    +        L+ + +    
Sbjct: 303 IGVPGDREVDFKRLEAALEPAEVELL----EEADFAKNPFLVKGYIGPKALQENGVRYLV 358

Query: 585 DFR 587
           D R
Sbjct: 359 DPR 361



 Score = 89.5 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 64/170 (37%), Gaps = 11/170 (6%)

Query: 484 KDAIGRDWQCGTIQVDFNLP---SRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMI 539
            D  G       I++           +AF V++      PV I    +G  + R + ++ 
Sbjct: 406 PDGHGTLVAARGIEIGHIFQLGRKYTDAFEVDALGPDSKPVRITMGSYGVGVSRLVAVLA 465

Query: 540 ENFKGNLPL-WLSPI-----QAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
           E       L W   +       ++     +  E A+++A  L +  L I  D R  T   
Sbjct: 466 EQNHDEQGLVWPREVSPFDVHVVIAGKDETVREGAEKLAAELDAAGLEIILDDRKATPGV 525

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           K  +  +  +P I++ G +  +   + ++   +   +++++   +  L K
Sbjct: 526 KFADAELVGVPTILVVG-RGLANGLVEVKDRRTGEREEIAVDSVVDHLAK 574


>gi|238854745|ref|ZP_04645075.1| proline--tRNA ligase [Lactobacillus jensenii 269-3]
 gi|260663977|ref|ZP_05864830.1| prolyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
 gi|282932864|ref|ZP_06338261.1| proline--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|313472268|ref|ZP_07812760.1| proline--tRNA ligase [Lactobacillus jensenii 1153]
 gi|238832535|gb|EEQ24842.1| proline--tRNA ligase [Lactobacillus jensenii 269-3]
 gi|239529664|gb|EEQ68665.1| proline--tRNA ligase [Lactobacillus jensenii 1153]
 gi|260561863|gb|EEX27832.1| prolyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
 gi|281302899|gb|EFA95104.1| proline--tRNA ligase [Lactobacillus jensenii 208-1]
          Length = 565

 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 43/198 (21%), Positives = 80/198 (40%), Gaps = 11/198 (5%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
            H+ + R   +  +    +GV  +   G+++ +     +  ++   +  E+  P +L   
Sbjct: 22  SHKIMIRGGYIRQV---TAGVYSYLPLGYRVLRKAERIIEEEMDRINVPEMIMPHLLPAT 78

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LWQ+SG +  Y   MF +K      +  R   L P +      +    LKSY+++P+ L 
Sbjct: 79  LWQESGRYYKYGDEMFKLKD-----RHGRDSLLGPTHEETFTEIIAKNLKSYKQMPLALY 133

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEK 422
           +  + +R+E      GL+R R F   D + F  T+EQ+  +          I+K  G   
Sbjct: 134 QIQTKFRDENRPRF-GLLRGREFVMLDGYSFAATREQLDKQFDDQKAAYKRIFKRAGVTV 192

Query: 423 IMVKLSTRPEKRVGSDAL 440
             V   +       S   
Sbjct: 193 HPVIADSGTMGGKNSTEF 210



 Score = 64.0 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 24/153 (15%), Positives = 49/153 (32%), Gaps = 9/153 (5%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIV 557
           +         A +++ +  K  PV++     G        + +N   +   W   I    
Sbjct: 414 LGTYYTETMGADFLDQNG-KAQPVIMGSYGIGVTRMLSAAVEQNLTEHGVAWPKEIAPFT 472

Query: 558 T------TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
                         + A+ +          +  D R E    K  +  +   PI I  G 
Sbjct: 473 LHLIQMKMNDEDQTKLAESLETKFSEK-YDVLYDDRKERAGVKFADADLVGAPIRITIGK 531

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           K A++  + ++R       ++S+ D    + KE
Sbjct: 532 K-AADGIVEVKRPTDDKAVEISVDDLEAFVAKE 563


>gi|327468388|gb|EGF13873.1| proline--tRNA ligase [Streptococcus sanguinis SK330]
          Length = 616

 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 45/250 (18%), Positives = 93/250 (37%), Gaps = 16/250 (6%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  ++    GV  +     ++ +     MR +
Sbjct: 4   SKMLIPTLREMPSDAQVISHALMLRAGYVRQVSA---GVYSYLPLANRVIEKAKKIMREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
                  E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     
Sbjct: 61  FDKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           A+    +KSY++LP+ L +    YR+E     +GL+R R F   DA+ F       +   
Sbjct: 116 AIVRDSVKSYKQLPLNLYQIQPKYRDEKRPR-NGLLRTREFIMKDAYSFHANYDSLDAAY 174

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD-----ALWDDAENIMKGVLDTIKNSSQ 460
             +                  +        G D     A+  D  ++ + V+     +S 
Sbjct: 175 DEYKSAYEKIFTRSELDFKAIIGDGGAMG-GKDSQEFMAITPDRTDLNRWVVLDKSVASF 233

Query: 461 DRINTGVLLG 470
           D I   V   
Sbjct: 234 DEIPEDVQEA 243



 Score = 66.0 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 59/173 (34%), Gaps = 20/173 (11%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S      V   + +  P+++     G       +M ++       
Sbjct: 441 RGIEIGHIFKLGTRYSDSMNANVLDENGRAVPMIMGCYGIGVSRLLSAVMEQHARLFVNK 500

Query: 542 ---------FKGNLPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNE 589
                    +  N P  L+P    +  +      A+    +I   L S    +  D RNE
Sbjct: 501 TPKGEFRYAWGINFPKELAPFDVHMIPVNVKDEEALALTDQIEANLLSAGYEVLVDDRNE 560

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
               K  +  +  +PI +  G K A+E  + ++   +  T +V   + +  L+
Sbjct: 561 RAGVKFSDSDLIGLPIRVTVGKK-AAEGIVEVKIKATGDTIEVHADNLLETLS 612


>gi|94496356|ref|ZP_01302933.1| prolyl-tRNA synthetase [Sphingomonas sp. SKA58]
 gi|94424102|gb|EAT09126.1| prolyl-tRNA synthetase [Sphingomonas sp. SKA58]
          Length = 508

 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 67/398 (16%), Positives = 135/398 (33%), Gaps = 71/398 (17%)

Query: 270 RKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKC---- 323
             G+ I++ +   +  +IK   +E    P  +    ++ ++ H D +   M  V      
Sbjct: 40  PWGYGIWERMQKLLDEQIKATGHENCYFPLFIPLSYFEKEAEHVDGFAKEMAVVTHHRLI 99

Query: 324 -------ADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
                   D   K      ++P +     A F+  ++S+R+LPV + ++ +V R E    
Sbjct: 100 QQDGKLVPDPEAKLEEPLVVRPTSETVIGAAFSRWVQSWRDLPVLINQWANVVRWEMR-- 157

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
               +R   F   + H   T      E +     ++ +Y+ F                  
Sbjct: 158 TRMFLRTAEFLWQEGH---TAHATVGEAMDETLKMLEVYRAF------------------ 196

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
                  AE  +   +   +    +R         GA      E +++D  G+  Q GT 
Sbjct: 197 -------AEECVAMPVIAGEKPENERFP-------GAVATYSIEAMMQD--GKALQAGTS 240

Query: 497 QVDFNLPSRF-NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLS 551
                L + F  A  +   + +    +     +G   R IG +I    ++    +P  ++
Sbjct: 241 HF---LGTTFSQAQNIKFQNAEGQQELAQTTSWGVSTRMIGGLIMTHGDDDGLRVPPRVA 297

Query: 552 PIQAIVTTI------TSSAVEYAQEIANLLKSHH-----LSIETDFRNETINYKIREHSI 600
           P Q ++  +       ++ VEY   + + L         +    D R      K      
Sbjct: 298 PYQIVIVPMLRDTEEDAAIVEYCTNLVHRLNQLDAFREPVRALLDKRPAKAATKRWGWVK 357

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           K  PI+I  G ++ +  ++ + R      +   L   I
Sbjct: 358 KGAPIVIEVGSRDVAGGNVSVIRRDRLYREDGKLDSRI 395


>gi|224437778|ref|ZP_03658725.1| prolyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
 gi|313144224|ref|ZP_07806417.1| prolyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
 gi|313129255|gb|EFR46872.1| prolyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
          Length = 593

 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 47/221 (21%), Positives = 91/221 (41%), Gaps = 11/221 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  +       +++  + H+ L R      I + GSG+  +   G K+   +   ++ 
Sbjct: 3   FSQLFVNTLKEAPKDALLKSHQYLVRGG---FIQQVGSGIYNFLPLGKKLLDKVRFIIKE 59

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++   + +EI    V    LW++SG ++ Y   +  +    +       F L P +    
Sbjct: 60  EMDITNAQEILMGFVTPADLWRESGRYEKYGRELLRLVDRKEN-----EFVLGPTHEEVV 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
             +  +G+KSY++LPV L +  + +R+E      GLMR R F   D + F +  E +  E
Sbjct: 115 TFIAKNGVKSYKQLPVHLYQIHTKFRDEVRPRF-GLMRGREFIMKDGYSFHSSFEDLDRE 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
              +      I +  G +  +V+  +      GS      A
Sbjct: 174 FDVMEQTYKKILERIGVDFKIVEADSGAIGGSGSKEFMVLA 214



 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/147 (14%), Positives = 53/147 (36%), Gaps = 8/147 (5%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQA-- 555
           +        NA +++    K   +++    FG       I+ +       +W   ++   
Sbjct: 437 LGTKYSHAMNAQFLDKDG-KAQDLIMGCYGFGVSRILPAILEQKSDELGCVWGKEVKVFD 495

Query: 556 --IVTTITSS--AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
             I+ +        E+A +I    K+  + +  D R+E    K+++  +      +I G 
Sbjct: 496 LAIIISNVKDIAQSEFATKIYEECKARGIDVLLDDRDERFGVKMKDFELLGFSFALIVG- 554

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAI 638
           K  +E  + + +       ++   + I
Sbjct: 555 KGLNEGRLELIKREGLKKFELQCDENI 581


>gi|58337540|ref|YP_194125.1| prolyl-tRNA synthetase [Lactobacillus acidophilus NCFM]
 gi|227904181|ref|ZP_04021986.1| prolyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
 gi|81311450|sp|Q5FJN0|SYP_LACAC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|58254857|gb|AAV43094.1| prolyl-tRNA synthetase [Lactobacillus acidophilus NCFM]
 gi|227868200|gb|EEJ75621.1| prolyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
          Length = 565

 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 45/216 (20%), Positives = 90/216 (41%), Gaps = 11/216 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++    H+ + R   +  +    +GV  +   G+++ +   S + ++
Sbjct: 4   SKFFMPTLKEAPSDAVAESHKLMIRGGYIRQV---TAGVYAYLPLGYRVLRKAESIIEQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           + + +  E+  P +L   LWQ+SG +  Y A MF +K      +  R   L P +     
Sbjct: 61  MDNINVPEMMMPHLLPATLWQESGRYQKYGAEMFKLKD-----RHGRESLLGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNEC 404
            +    LKSY+++P+ L +  + +R+E      GL+R R F   D + F  T+EQ+  + 
Sbjct: 116 EIIAKNLKSYKQMPLALYQIQTKFRDENRPRF-GLLRGREFVMLDGYSFAATREQLDQQF 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
               +    I+K  G     V   +       S   
Sbjct: 175 DDQKSAYKRIFKRAGVTVHPVIADSGTMGGKNSTEF 210



 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 22/159 (13%), Positives = 53/159 (33%), Gaps = 8/159 (5%)

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL- 550
           + G I       ++         + K  PV++     G       ++ ++       W  
Sbjct: 407 EVGHIFKLGTYYTKTMGADFLDQNGKAQPVIMGSYGIGVTRMLSAVVEQHLTDRGVAWPK 466

Query: 551 --SPIQAIVT---TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPI 605
             +P +  +           E A+++          +  D R E    K  +  +   P+
Sbjct: 467 EIAPFEIHIVQMKMNKEDQTELAEKLEKKFSEK-YDVLYDDRKERAGVKFADADLVGAPV 525

Query: 606 IIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            I  G K A++  + ++R       ++S+ +    + +E
Sbjct: 526 RITIGKK-AADGIVEVKRPTDEKAVEMSIDELDKFVNQE 563


>gi|319940262|ref|ZP_08014614.1| prolyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
 gi|319810564|gb|EFW06900.1| prolyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
          Length = 619

 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 37/188 (19%), Positives = 79/188 (42%), Gaps = 10/188 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  I+    GV  +     ++ + +   MR +
Sbjct: 4   SKMLIPTLREMPSDAQVISHALMLRAGYVRQISA---GVYSYLPLANRVIEKVKKIMREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +     E+  P +L   LW++SG +D+Y  +++ +K      ++   F L P +     
Sbjct: 61  FEKIGAVEMLAPALLSADLWRESGRYDTYGEDLYKLKN-----REGSDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           A+    +KSY++LP+ L +  + YR+E     +GL+R R F   D + F       +   
Sbjct: 116 AIVRDSVKSYKQLPLNLYQIQAKYRDEKRPR-NGLLRTREFIMKDGYSFHANYDSLDVTY 174

Query: 406 KIHNLIIS 413
             +     
Sbjct: 175 DEYKTAYE 182



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 36/179 (20%), Positives = 70/179 (39%), Gaps = 25/179 (13%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------ 541
           R  + G I  +        NA  ++ +  +  PV++     G       +M ++      
Sbjct: 441 RGIEIGHIFKLGTRYSESMNATVLDENG-RAVPVVMGCYGIGVSRLLSAVMEQHARLFVN 499

Query: 542 ----------FKGNLPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRN 588
                     +  N P  L+P    +  +      A+   +++   L      + TD RN
Sbjct: 500 KTPKGDYRYAWGINFPKELAPFDVHLIPVNVKDEEALALTEQLEAELLKAGYEVLTDDRN 559

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV---SLLDAIPILTKE 644
           E    K  +  +  +PI +  G K A++R + ++   +  T +V   +LL+ + ILTKE
Sbjct: 560 ERAGVKFSDSDLIGLPIRVTIGKK-AADRIVEVKIKATGDTIEVHVDNLLETLAILTKE 617


>gi|325695492|gb|EGD37392.1| proline--tRNA ligase [Streptococcus sanguinis SK150]
          Length = 616

 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 47/275 (17%), Positives = 96/275 (34%), Gaps = 37/275 (13%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  ++    GV  +     ++ +     MR +
Sbjct: 4   SKMLIPTLREMPSDAQVISHALMLRAGYVRQVSA---GVYSYLPLANRVIEKAKKIMREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
                  E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     
Sbjct: 61  FDKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           A+    +KSY++LP+ L +    YR+E     +GL+R R F   DA+ F       +   
Sbjct: 116 AIVRDSVKSYKQLPLNLYQIQPKYRDEKRPR-NGLLRTREFIMKDAYSFHANYDSLDVAY 174

Query: 406 KIHNLIISIYKDF----------------GFEKIMVKLSTRPEKRVGS-----------D 438
             +                          G +       T     V             D
Sbjct: 175 DEYKSAYEKIFTRSELDFKAIIGDGGAMGGKDSQEFMAITPDRTDVNRWVVLDKSVASFD 234

Query: 439 ALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
            + +DA+  ++  L +   S +D I         A
Sbjct: 235 EIPEDAQEAIRTELTSWMVSGEDTIAYSSESSYAA 269



 Score = 66.7 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 59/173 (34%), Gaps = 20/173 (11%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S      V   + +  P+++     G       +M ++       
Sbjct: 441 RGIEIGHIFKLGTRYSDSMNANVLDENGRAVPMIMGCYGIGVSRLLSAVMEQHARLFVNK 500

Query: 542 ---------FKGNLPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNE 589
                    +  N P  L+P    +  +      A+    +I   L S    +  D RNE
Sbjct: 501 TPKGEFRYAWGINFPKELAPFDVHLIPVNVKDEEALTLTDQIEANLLSAGYEVLVDDRNE 560

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
               K  +  +  +PI +  G K A+E  + ++   S  T +V   + +  L+
Sbjct: 561 RAGVKFSDSDLIGLPIRVTVGKK-AAEGIVEVKIKASGDTIEVHADNLLETLS 612


>gi|229027206|ref|ZP_04183484.1| Threonyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228734095|gb|EEL84811.1| Threonyl-tRNA synthetase [Bacillus cereus AH1272]
          Length = 101

 Score =  122 bits (305), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 29/96 (30%), Positives = 59/96 (61%), Gaps = 1/96 (1%)

Query: 550 LSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIII 608
           ++P+Q  V  ++++  V+YA E+A+ L    + +E D R+E + YKIRE  ++K+P +++
Sbjct: 1   MAPVQVKVIPVSNAVHVQYANEVAHKLAQAGIRVEEDIRDEKLGYKIREAQMQKVPYVLV 60

Query: 609 CGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            GDKE    ++ +R++G   ++ V L   +  + +E
Sbjct: 61  IGDKEMESEAVNVRKYGEEESKIVELDAFVESMKEE 96


>gi|254505786|ref|ZP_05117932.1| threonyl-tRNA synthetase [Vibrio parahaemolyticus 16]
 gi|219551439|gb|EED28418.1| threonyl-tRNA synthetase [Vibrio parahaemolyticus 16]
          Length = 91

 Score =  122 bits (305), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 35/94 (37%), Positives = 57/94 (60%), Gaps = 5/94 (5%)

Query: 1  MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
          MP    +T PDGS + F    +  +VA+SI   LAK  +A  ++G+  D  D + ++ S+
Sbjct: 1  MP---IITLPDGSQRQFDNPVSTLEVAQSIGPGLAKATIAGRVDGERVDACDLIAQDASL 57

Query: 60 EIITPEDP-RSLAVIRHSCAHIMAEAVQSIWPEV 92
          EIIT +D    L ++RHSCAH++  A++ ++PE 
Sbjct: 58 EIITVKDEVDGLEIVRHSCAHLLGHAIKQLYPEA 91


>gi|225412274|ref|ZP_03761463.1| hypothetical protein CLOSTASPAR_05496 [Clostridium asparagiforme
           DSM 15981]
 gi|225042192|gb|EEG52438.1| hypothetical protein CLOSTASPAR_05496 [Clostridium asparagiforme
           DSM 15981]
          Length = 555

 Score =  122 bits (305), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 45/201 (22%), Positives = 87/201 (43%), Gaps = 4/201 (1%)

Query: 12  GSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIEIITPEDPRSLA 71
             ++ +P   T  +VA           + V +NGK+ +L   VR+ S+  IT  D   ++
Sbjct: 13  NEVREYPEGTTWLEVAGEYQHFYENDILLVRVNGKLQELHKHVRDCSLTFITARDKPGMS 72

Query: 72  VIRHSCAHIMAEAVQSIWPE---VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQE 128
             + S + +M +A   +       +V++   I  GF+ +   +   + + L Q+++KM+E
Sbjct: 73  AYQRSASLLMLKAFYDVVGAERVRKVSVDFSIGKGFFVEPSGDFELTPELLNQVKEKMRE 132

Query: 129 IIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
            +    P +K+ +  + A ELF       K   L +      V +Y  G + D   G  V
Sbjct: 133 YVEEAIPIMKRSVHTDDAVELFHRHGMYDKAR-LFNYRRVSRVNIYSIGGFEDYYYGYMV 191

Query: 189 RSTGQVKKFFKLMKVAGAYWR 209
           ++TG ++ F  +    G    
Sbjct: 192 QNTGYIRYFDLIPYHYGFVLM 212


>gi|157150969|ref|YP_001451117.1| prolyl-tRNA synthetase [Streptococcus gordonii str. Challis substr.
           CH1]
 gi|189083519|sp|A8AZA7|SYP_STRGC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|157075763|gb|ABV10446.1| prolyl-tRNA synthetase [Streptococcus gordonii str. Challis substr.
           CH1]
          Length = 616

 Score =  122 bits (305), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 80/198 (40%), Gaps = 10/198 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  L R   +  ++    GV  +     ++ +   + MR++
Sbjct: 4   SKMLIPTLREMPSDAQVISHALLLRAGYVRQVSA---GVYSYLPLANRVIEKAKNIMRQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +     E+  P +L   LW++SG +++Y  ++F +K      ++   F L P +     
Sbjct: 61  FEKIGAVEMLAPALLSADLWRESGRYETYGDDLFKLKN-----REGSDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           A+    +KSY++LP+ L +    YR+E     +GL+R R F   DA+ F       +   
Sbjct: 116 ALVRDSVKSYKQLPLNLYQIQPKYRDEKRPR-NGLLRTREFIMKDAYSFHANYDSLDVTY 174

Query: 406 KIHNLIISIYKDFGFEKI 423
             +               
Sbjct: 175 DEYKSAYEKIFTRSEIDF 192



 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 59/173 (34%), Gaps = 20/173 (11%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S      V   + +  P+++     G       +M ++       
Sbjct: 441 RGIEIGHIFKLGTRYSDSMNATVLDENGRAVPLVMGCYGIGVSRLLSAVMEQHARLFVNK 500

Query: 542 ---------FKGNLPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNE 589
                    +  N P  L+P    +  +      ++    +I   L      +  D RNE
Sbjct: 501 TPKGEYRYAWGINFPKELAPFDVHLIPVNVKDEESLALTDKIEESLVGAGYEVLVDDRNE 560

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +  K  +  +  +PI +  G K A+E  + ++   S  T +V   + I  L+
Sbjct: 561 RVGVKFSDSDLIGLPIRVTVGKK-AAEGIVEVKIKASGDTIEVHADNLIETLS 612


>gi|225874389|ref|YP_002755848.1| proline--tRNA ligase [Acidobacterium capsulatum ATCC 51196]
 gi|254782879|sp|C1F3P3|SYP_ACIC5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|225793232|gb|ACO33322.1| proline--tRNA ligase [Acidobacterium capsulatum ATCC 51196]
          Length = 585

 Score =  121 bits (304), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 42/203 (20%), Positives = 85/203 (41%), Gaps = 10/203 (4%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQ 298
            ++E   H+ L R   +  +   G+G+  +   G +    ++  +R ++    +E   P 
Sbjct: 17  SDAEVASHKFLLRSGYIRQL---GAGIYSYLLFGQRSINKIVGIVREEMDKIGQEFLLPA 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +    LW++SG W     NMF +K      +      L   +      +  + L+SY++L
Sbjct: 74  IHPADLWRESGRWTVMGDNMFRLKD-----RKGAELCLGMTHEEVMTDIARNELRSYKQL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS-IYKD 417
           P    +  + +R+EP     GL+RVR F   D++ F   +   ++   +H+     I+  
Sbjct: 129 PQIWYQIQNKFRDEPRPR-SGLLRVRQFLMKDSYSFDLNQAGLDKSYDLHDAAYRAIFTR 187

Query: 418 FGFEKIMVKLSTRPEKRVGSDAL 440
            G   ++V+  +      GS   
Sbjct: 188 CGLNFVVVEADSGAMGGSGSQEF 210



 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/162 (21%), Positives = 63/162 (38%), Gaps = 11/162 (6%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           +  + G I  +         A  ++ + ++  PVM    +   IER +   IE       
Sbjct: 423 KAVEIGHIFKLGTKYTESMGARVLDENGKEVMPVMGCYGI--GIERILTASIEQNNDANG 480

Query: 548 LWLSPIQA---IVTTITSSAVEYAQEI----ANLLKSHHLSIETDFRNETINYKIREHSI 600
            WL    A   +V TIT+ A E  ++     A  L++    +  D R E    K ++  +
Sbjct: 481 FWLPRSIAPFDVVVTITNMADETLRQAGEALAAQLEAAGYDVLLDDREERAGVKFKDADL 540

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             IP     G K    ++  +    + ++Q V+L  A+  L 
Sbjct: 541 VGIPYRFNVGKKTLEGKT-ELVTRATASSQDVALDAAVEALK 581


>gi|260588577|ref|ZP_05854490.1| phosphoribulokinase family protein [Blautia hansenii DSM 20583]
 gi|260541052|gb|EEX21621.1| phosphoribulokinase family protein [Blautia hansenii DSM 20583]
          Length = 576

 Score =  121 bits (304), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 53/238 (22%), Positives = 96/238 (40%), Gaps = 5/238 (2%)

Query: 12  GSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSL 70
           G  K +P   T   +A+          V +  + K+C+L   ++ EG+IE IT +D    
Sbjct: 33  GEQKEYPYGTTYGKIAQEYQSKYEYPIVLLMKDNKLCELHKKLKKEGTIEFITTQDQIGH 92

Query: 71  AVIRHSCAHIMAEAVQSIWPE---VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQ 127
              R S + ++ +A+  +       +V +   +  G+YY  D +   + D L +++  M 
Sbjct: 93  ETYRRSVSLLLLKALHHVAGYDNITKVTMHYSVSSGYYYTIDGDIVLNEDFLNKVKAYML 152

Query: 128 EIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPH 187
           E++ R  P LK+ +  ++A ELF + K   K E L        V +Y   E+ D   G  
Sbjct: 153 ELVERKIPILKRSVGTDEAIELFHNHKMYDK-EKLFRFRRVSRVNIYSLEEYEDYFYGFM 211

Query: 188 VRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           V  TG +K F   +   G   +                    ++ +      E+ + D
Sbjct: 212 VNHTGYLKYFDLYLYDDGLVLQLPKRENPKEVPPFVPRPKIFQVQKESAQWSEAIQAD 269


>gi|225619417|ref|YP_002720643.1| prolyl-tRNA synthetase [Brachyspira hyodysenteriae WA1]
 gi|254782887|sp|C0QY98|SYP_BRAHW RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|225214236|gb|ACN82970.1| prolyl-tRNA synthetase [Brachyspira hyodysenteriae WA1]
          Length = 578

 Score =  121 bits (304), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 48/265 (18%), Positives = 105/265 (39%), Gaps = 15/265 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++    ++ + R      I+   +G+  +   G ++   + + +R +
Sbjct: 4   SKLFMPTLKEAPSDAIIASNKLMLRAALARKIS---NGLYSYLPLGVRVLNKISNIIREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E   P ++ + L   SG W+ ++  +F +K  +D        A+ P +     
Sbjct: 61  MDAIGSNECIMPILVSKELLTPSGRWERFKKELFRLKDRNDV-----DMAMGPTHEEAFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNEC 404
               + ++SY++ P+ L +  + +R+E      G++R + FT  DA+ F  TKE +    
Sbjct: 116 ITAQNEIQSYKDFPLTLYQIHTKFRDEIRPRF-GVIRSKEFTMKDAYSFHITKECLDKTY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
             +      I+K  G + + VK  +      GS+     +E   + ++   K   +  + 
Sbjct: 175 NDMSGAYTKIFKRMGLDTVSVKADSGAMGGEGSEEFMVLSEVGEETIIFCSKCDYRANVE 234

Query: 465 TG-VLLGEGAF-YGPKF--EYILKD 485
              V   E A  Y  K   E    D
Sbjct: 235 KANVKEEEAAKSYTDKALEEVHTPD 259



 Score = 80.2 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/152 (23%), Positives = 67/152 (44%), Gaps = 9/152 (5%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPI 553
           +       FN   ++ ++++  P+M    +   + R +  +IE    +     P+ ++P 
Sbjct: 415 LGDKYTEAFNFKVLDENNKEITPIMGCYGI--GVNRALASVIEQNYDDKGIIFPISVAPY 472

Query: 554 QAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           +AIV  I   T  + + A+EI N L S  +    D R E +  K+ +  +  IPI II G
Sbjct: 473 EAIVVAIDKETEDSFKKAEEIYNTLNSIGVETMFDDRKERLGVKLNDCDLIGIPIRIIVG 532

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            K   +  +  +   S  + +V + D I  + 
Sbjct: 533 KKSLQKGVVEFKLRKSQESVEVKVEDIIEYVK 564


>gi|315453026|ref|YP_004073296.1| prolyl-tRNA synthetase [Helicobacter felis ATCC 49179]
 gi|315132078|emb|CBY82706.1| prolyl-tRNA synthetase [Helicobacter felis ATCC 49179]
          Length = 577

 Score =  121 bits (304), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 48/257 (18%), Positives = 92/257 (35%), Gaps = 27/257 (10%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQ 302
           + H+ + +   L    + GSG+  +   G K+   + + ++  +     +E     V+  
Sbjct: 21  KSHQFMVQGGYL---QQMGSGLYHFLPLGHKVLSKIRAVVKEVMDSYGAQECTLGFVVPA 77

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LWQ+SG ++ Y   + +     + +       L P +      +    +KSY++LP+ L
Sbjct: 78  SLWQESGRFEQYGKELLSFPDRKNNL-----CVLSPTHEEAITQIAKSHIKSYKQLPLNL 132

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKDFGFE 421
            +  + +R+E      GLMR R F   DA+ F  + E +  E  ++H     I+   G  
Sbjct: 133 YQIHTKFRDEIRPRF-GLMRAREFVMKDAYSFHASTECLDKEFERMHAAYSEIFSRLGLN 191

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
              V+  +       S             VL      S       V++ +   Y    E 
Sbjct: 192 FRAVEADSGAIGGSKSKEF---------VVLAACGEDS-------VIVCQKCNYAANVEI 235

Query: 482 ILKDAIGRDWQCGTIQV 498
             +            Q 
Sbjct: 236 AKRAKRPEPDNVPKAQF 252



 Score = 57.5 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 22/162 (13%), Positives = 51/162 (31%), Gaps = 9/162 (5%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I  +         A Y++   +  +  M      G       I+ +N      
Sbjct: 415 RSIEVGHIFKLGNKYSKSLEARYLDQEGQLQYFEM-GCYGIGVSRLMSAILEQNSDEKGC 473

Query: 548 LWL---SPIQAIVTTITSS---AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W    +P + +V    S         +E+   LK   + +  D R +    K+ +  + 
Sbjct: 474 VWSKTSAPFEVVVLVANSKDSALESLGEELYQELKGAGVDVLLDDRIDRFGAKMADFELI 533

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
                +I G +        +      + + ++    +  L +
Sbjct: 534 GCSHALIVGKQALE-GQFELIARQGLSKRVIAREAIVSTLLE 574


>gi|312869026|ref|ZP_07729203.1| proline--tRNA ligase [Lactobacillus oris PB013-T2-3]
 gi|311095452|gb|EFQ53719.1| proline--tRNA ligase [Lactobacillus oris PB013-T2-3]
          Length = 578

 Score =  121 bits (304), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 42/221 (19%), Positives = 95/221 (42%), Gaps = 11/221 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++E   H  + R   ++ I+    GV  +    +++ + +   M  +
Sbjct: 4   SKLLIPTKKENPSDAEALSHIMMERAGYIYQISA---GVWAYLPLAYRVIRKIHQIMHEE 60

Query: 287 IK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++     ++ TP +L   LW+Q+G +++Y   ++  K  +D     R + L P +     
Sbjct: 61  MEKAGAFQMETPSMLPADLWKQTGRYEAYGDTLYKFKDHND-----REYILGPTDEEAMT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    +KSY++LP+ + +    +RNEP    +G++R + F+  DA+ F   E+  +E  
Sbjct: 116 EILRDSVKSYKKLPLVVYQITDKFRNEPRPR-YGVLRGKEFSMLDAYSFAADEEGLDEAY 174

Query: 406 KIH-NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
           +       +I+   G    ++   +       S      AE
Sbjct: 175 QAQAQAYRNIFDRAGLSYKVILADSGTIGGDNSQEFSAPAE 215



 Score = 77.9 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 65/182 (35%), Gaps = 15/182 (8%)

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
           V  GE A  G   ++     IG  ++ GT         +  A  ++ +  +   +++   
Sbjct: 391 VQEGEIAPDGYPIKFTNGIEIGHIFKLGT-----GYSKKLGAQVLDKNG-RLVDMIMGCY 444

Query: 527 VFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHH 579
             G   R +  + E          P  ++P    V  +       +  A E+   L +  
Sbjct: 445 GIGVT-RMLSAVAEQNADENGLVWPDSIAPFDVHVIPVNAKKDEQMTMANELEQQLTAAG 503

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
             +  D R E    K  +  +  IP+ +  G K A++  + ++   +  T +V   + + 
Sbjct: 504 YEVLVDDRKERAGVKFADSDLIGIPLRVTIGKK-AADGIVEVKIRKTGETLEVKQEELVN 562

Query: 640 IL 641
            +
Sbjct: 563 TV 564


>gi|296877243|ref|ZP_06901283.1| proline--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
 gi|296431763|gb|EFH17570.1| proline--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
          Length = 616

 Score =  121 bits (304), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 44/253 (17%), Positives = 93/253 (36%), Gaps = 16/253 (6%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  ++    GV  +     ++ +     MR++
Sbjct: 4   SKMLIPTLREMPSDAQVISHALMLRAGYVRQVSA---GVYSYLPLANRVIEKAKGIMRQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +     E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     
Sbjct: 61  FEKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKN-----REGSDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           A+    +KSY++LP+ L +    YR+E     +GL+R R F   D + F       +   
Sbjct: 116 AIVRDSVKSYKQLPLNLYQIQPKYRDEKRPR-NGLLRTREFIMKDGYSFHANYDSLDVTY 174

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA-----ENIMKGVLDTIKNSSQ 460
             +                  +        G D+    A      ++ + V+      S 
Sbjct: 175 DEYKAAYERIFTRSGIDFKAIIGDGGAMG-GKDSQEFMAVTPARTDLDRWVVLDKSVPSF 233

Query: 461 DRINTGVLLGEGA 473
           D I   V     A
Sbjct: 234 DEIPAEVQEEIKA 246



 Score = 66.7 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/173 (16%), Positives = 60/173 (34%), Gaps = 20/173 (11%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S      V   + +  P+++     G       +M ++       
Sbjct: 441 RGIEIGHIFKLGTRYSASMGADVLDENGRAVPIIMGCYGIGVSRLLSAVMEQHARLFVNK 500

Query: 542 ---------FKGNLPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNE 589
                    +  N P  L+P    +  +     +++    +I   L +    +  D RNE
Sbjct: 501 TPKGEYRYAWGINFPKELAPFDVHLIPVNIKDEASLALTNQIEESLVNKGYEVLVDDRNE 560

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
               K  +  +  +PI +  G K A+E  + ++   +  T +V   + +  L+
Sbjct: 561 RAGVKFSDSDLIGLPIRVTVGKK-AAEGIVEVKIKATGDTIEVHADNLLETLS 612


>gi|325688976|gb|EGD30984.1| proline--tRNA ligase [Streptococcus sanguinis SK115]
          Length = 616

 Score =  121 bits (304), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 36/192 (18%), Positives = 77/192 (40%), Gaps = 10/192 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  ++    GV  +     ++ +     MR +
Sbjct: 4   SKMLIPTLREMPSDAQVISHALMLRAGYVRQVSA---GVYSYLPLANRVIEKAKKIMREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
                  E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     
Sbjct: 61  FDKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           A+    +KSY++LP+ L +    YR+E     +GL+R R F   DA+ F       +   
Sbjct: 116 AIVRDSVKSYKQLPLNLYQIQPKYRDEKRPR-NGLLRTREFIMKDAYSFHANYDSLDAAY 174

Query: 406 KIHNLIISIYKD 417
             +         
Sbjct: 175 DEYKSAYEKIFT 186



 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 59/173 (34%), Gaps = 20/173 (11%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S      V   + +  P+++     G       +M ++       
Sbjct: 441 RGIEIGHIFKLGTRYSDSMNANVLDENGRAVPMIMGCYGIGVSRLLSAVMEQHARLFVNK 500

Query: 542 ---------FKGNLPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNE 589
                    +  N P  L+P    +  +      A+    +I   L S    +  D RNE
Sbjct: 501 TPKGEFRYAWGINFPKELAPFDVHLIPVNVKDEEALTLTDQIEANLLSAGYEVLVDDRNE 560

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
               K  +  +  +PI +  G K A+E  + ++   +  T +V   + +  L+
Sbjct: 561 RAGVKFSDSDLIGLPIRVTVGKK-AAEGIVEVKIKATGDTIEVHADNLLETLS 612


>gi|15893960|ref|NP_347309.1| Fision threonyl-tRNA synthetase (N-terminal part) and uridine
           kinase [Clostridium acetobutylicum ATCC 824]
 gi|15023548|gb|AAK78649.1|AE007582_11 Fision threonyl-tRNA synthetase (N-terminal part) and uridine
           kinase [Clostridium acetobutylicum ATCC 824]
 gi|325508087|gb|ADZ19723.1| Fision threonyl-tRNA synthetase (N-terminal part) and uridine
           kinase [Clostridium acetobutylicum EA 2018]
          Length = 553

 Score =  121 bits (304), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 53/218 (24%), Positives = 93/218 (42%), Gaps = 4/218 (1%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
           M S I++   DG         +  D         A+ A+  ++NG + +L+      G  
Sbjct: 1   MSS-IEIKLKDGRSFKVNRGTSFHDFINQNKLEGAETAMLGSVNGNIYELTHKFSYSGIF 59

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDE 118
           +II  ++P  + V   +   ++ +AV  I P   V I   I +G + +  K +   +  +
Sbjct: 60  DIIDLKNPIGIKVYERTLQFVLVKAVSDILPNAVVTIEHSINNGIFGEIHKQDGELTEAD 119

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           + +I+ +M EI+ +D P  K  +  EKA E+FE      KV +L+ +  K  + LY    
Sbjct: 120 IDKIKNRMLEIVKKDLPIKKVTIDKEKAVEIFEKYGMKDKVRLLKYVKVK-YLKLYELDG 178

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPM 216
            +D   G    STG +K F       G   R    + +
Sbjct: 179 RYDYFYGAMAYSTGALKLFDLNYYKPGFILRIPLEKDV 216


>gi|257869604|ref|ZP_05649257.1| prolyl-tRNA synthetase [Enterococcus gallinarum EG2]
 gi|257803768|gb|EEV32590.1| prolyl-tRNA synthetase [Enterococcus gallinarum EG2]
          Length = 575

 Score =  121 bits (304), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 43/216 (19%), Positives = 82/216 (37%), Gaps = 11/216 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++E   H+ L R   +  +A    G+  +     ++ + +   MR +
Sbjct: 12  SKLFIPTLREIPSDAETLSHQLLVRAGYIRQVAA---GIYMYLPLAQRVLEKIKKLMREE 68

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +   D  E+  P +L   LWQ +G    Y  +++ +     T ++ R + L P +     
Sbjct: 69  LAKIDAVEMTMPVLLPLELWQSTGRDGLYGRSLYQL-----TDRNEREYVLGPTHEEPFT 123

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    + SY+ LP+ L +  S YR+E      GL+R R F   D + F   E   +   
Sbjct: 124 ELIKSEISSYKRLPISLYQIQSKYRDEQRPRF-GLIRSREFIMQDGYSFHADESSLDTTY 182

Query: 406 KIHNLIIS-IYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           + +      I +  G E   V           S   
Sbjct: 183 RRYEAAYHAILQRCGLEYRAVIGDNGLMGGHDSKEF 218



 Score = 74.4 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 60/162 (37%), Gaps = 11/162 (6%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG--- 544
           R  + G I  +      R  A  V+ + +   PVM+     G   R +  ++E       
Sbjct: 410 RGIEVGHIFKLGTKYSERLGATVVDENGQ-ETPVMMGCYGIGVS-RLLSTIVEQHGNEEG 467

Query: 545 -NLPLWLSPIQAIVTTITSS---AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
            + P  ++P    +   T          +E+   + +    +  D RNE    K  +  +
Sbjct: 468 IDWPKEIAPYDIHIIQTTMEDSYQTALCEEVEQAMLAVGYEVLVDDRNERAGVKFADADL 527

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
              PI +  G+K A+E  + I+   +  T +V   +    LT
Sbjct: 528 IGCPIRLTIGNK-ATEGIVEIKIKHTNATVEVRKEEVATTLT 568


>gi|194397930|ref|YP_002036964.1| prolyl-tRNA synthetase [Streptococcus pneumoniae G54]
 gi|307126481|ref|YP_003878512.1| prolyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
 gi|226701343|sp|B5E6T8|SYP_STRP4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|194357597|gb|ACF56045.1| prolyl-tRNA synthetase [Streptococcus pneumoniae G54]
 gi|306483543|gb|ADM90412.1| prolyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
          Length = 617

 Score =  121 bits (304), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 45/253 (17%), Positives = 96/253 (37%), Gaps = 16/253 (6%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  ++    GV  +     ++ +   + MR++
Sbjct: 4   SKMPIPTLREMPSDAQVISHALMLRAGYVRQVSA---GVYSYLPLANRVIEKAKNIMRQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +     E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     
Sbjct: 61  FEKIGAVEMLAPALLSAELWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           A+    +KSY++LP+ L +    YR+E     +GL+R R F   DA+ F       +   
Sbjct: 116 AIVRDSVKSYKQLPLNLYQIQPKYRDEKRPR-NGLLRTREFIMKDAYSFHANYDSLDSVY 174

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD-----ALWDDAENIMKGVLDTIKNSSQ 460
             +                  +        G D     A+     ++ + V+     +S 
Sbjct: 175 DEYKAAYERIFTRSGLDFKAIIGDGGAMG-GKDSQEFMAITSARTDLDRWVVLDKSVASF 233

Query: 461 DRINTGVLLGEGA 473
           D I   V     A
Sbjct: 234 DEIPAEVQEEIKA 246



 Score = 66.3 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 62/173 (35%), Gaps = 22/173 (12%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S      V   + +  P+++     G       +M ++       
Sbjct: 441 RGIEIGHIFKLGTRYSASMGADVLDENGRAVPIIMGCYGIGVSRLLSAVMEQHARLFVNK 500

Query: 542 ---------FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKS----HHLSIETDFRN 588
                    +  N P  L+P    + T+     E AQ +   L++        + TD RN
Sbjct: 501 TPKGEYRYAWGINFPKELAPFDVHLITVNVKDEE-AQALTEKLEASLMGAGYEVLTDDRN 559

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           E +  K  +  +  +PI I  G K A++  + ++   +  T +V   + +  L
Sbjct: 560 ERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVKIKATGDTIEVHADNVLETL 611


>gi|148994606|ref|ZP_01823748.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
 gi|168489739|ref|ZP_02713938.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|147927136|gb|EDK78174.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
 gi|183571778|gb|EDT92306.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|332075929|gb|EGI86396.1| prolyl-tRNA synthetase [Streptococcus pneumoniae GA17570]
          Length = 617

 Score =  121 bits (304), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 45/253 (17%), Positives = 96/253 (37%), Gaps = 16/253 (6%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  ++    GV  +     ++ +   + MR++
Sbjct: 4   SKMPIPTLREMPSDAQVISHALMLRAGYVRQVSA---GVYSYLPLANRVIEKAKNIMRQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +     E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     
Sbjct: 61  FEKIGAVEMLAPALLSAELWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           A+    +KSY++LP+ L +    YR+E     +GL+R R F   DA+ F       +   
Sbjct: 116 AIVRDSVKSYKQLPLNLYQIQPKYRDEKRPR-NGLLRTREFIMKDAYSFHANYDSLDSVY 174

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD-----ALWDDAENIMKGVLDTIKNSSQ 460
             +                  +        G D     A+     ++ + V+     +S 
Sbjct: 175 DEYKAAYERIFTRSGLDFKAIIGDGGAMG-GKDSQEFMAITSARTDLDRWVVLDKSVASF 233

Query: 461 DRINTGVLLGEGA 473
           D I   V     A
Sbjct: 234 DEIPAEVQEEIKA 246



 Score = 66.3 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 62/173 (35%), Gaps = 22/173 (12%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S      V   + +  P+++     G       +M ++       
Sbjct: 441 RGIEIGHIFKLGTRYSASMGADVLDENGRAVPIIMGCYGIGVSRLLSAVMEQHARLFVNK 500

Query: 542 ---------FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKS----HHLSIETDFRN 588
                    +  N P  L+P    + T+     E AQ +   L++        + TD RN
Sbjct: 501 TPKGEYRYAWGINFPKELAPFDVHLITVNVKDEE-AQALTEKLEASLMGAGYEVLTDDRN 559

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           E +  K  +  +  +PI I  G K A++  + ++   +  T +V   + +  L
Sbjct: 560 ERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVKIKATGDTIEVHADNVLETL 611


>gi|149011134|ref|ZP_01832439.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
 gi|147764770|gb|EDK71700.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
          Length = 617

 Score =  121 bits (304), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 45/253 (17%), Positives = 96/253 (37%), Gaps = 16/253 (6%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  ++    GV  +     ++ +   + MR++
Sbjct: 4   SKMPIPTLREMPSDAQVISHALMLRAGYVRQVSA---GVYSYLPLANRVIEKAKNIMRQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +     E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     
Sbjct: 61  FEKIGAVEMLAPALLSAELWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           A+    +KSY++LP+ L +    YR+E     +GL+R R F   DA+ F       +   
Sbjct: 116 AIVRDSVKSYKQLPLNLYQIQPKYRDEKRPR-NGLLRTREFIMKDAYSFHANYDSLDSVY 174

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD-----ALWDDAENIMKGVLDTIKNSSQ 460
             +                  +        G D     A+     ++ + V+     +S 
Sbjct: 175 DEYKAAYERIFTRSGLDFKAIIGDGGAMG-GKDSQEFMAITSARTDLDRWVVLDKSVASF 233

Query: 461 DRINTGVLLGEGA 473
           D I   V     A
Sbjct: 234 DEIPAEVQEEIKA 246



 Score = 65.2 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 62/173 (35%), Gaps = 22/173 (12%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S      V   + +  P+++     G       +M ++       
Sbjct: 441 RGIEIGHIFKLGTRYSASMGADVLDENGRAVPIIMGCYGIGVSRLLSAVMEQHARLFVNK 500

Query: 542 ---------FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKS----HHLSIETDFRN 588
                    +  N P  L+P    + T+     E AQ +   L++        + TD RN
Sbjct: 501 TPKGEYRYAWGINFPKELAPFDVHLITVNVKDEE-AQALTEKLEASLMGAGYEVLTDDRN 559

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           E +  K  +  +  +PI I  G K A++  + ++   +  T +V   + +  L
Sbjct: 560 ERVGVKFSDSDLIGLPIRITVGKK-ATDGIVEVKIKATGDTIEVHADNVLETL 611


>gi|227892604|ref|ZP_04010409.1| prolyl-tRNA synthetase [Lactobacillus ultunensis DSM 16047]
 gi|227865589|gb|EEJ73010.1| prolyl-tRNA synthetase [Lactobacillus ultunensis DSM 16047]
          Length = 565

 Score =  121 bits (304), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 43/216 (19%), Positives = 88/216 (40%), Gaps = 11/216 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++    H+ + R   +  +    +GV  +   G+++ +   + + ++
Sbjct: 4   SKFFMPTLKEAPSDAVAESHKLMIRGGYIRQV---TAGVYAYLPLGYRVLRKAEAIIEQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +   +  E+  P +L   LWQ+SG +  Y   MF +K      +  R   L P +     
Sbjct: 61  MDRINVPEMIMPHLLPATLWQESGRYKKYGPEMFKLKD-----RHGRESLLGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNEC 404
            +    LKSY+++P+ L +  + +R+E      GL+R R F   D + F  T++Q+  + 
Sbjct: 116 EIIAKNLKSYKQMPLALYQIQTKFRDENRPRF-GLLRGREFVMLDGYSFAATRDQLDEQF 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
               N    I+K  G     V   +       S   
Sbjct: 175 DDQKNAYKRIFKRAGVSVHPVIADSGTMGGKNSTEF 210



 Score = 69.8 bits (169), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 23/159 (14%), Positives = 52/159 (32%), Gaps = 8/159 (5%)

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL- 550
           + G I       ++         + K  PV++     G        + ++   +   W  
Sbjct: 407 EVGHIFKLGTYYTKTMGADFLDQNGKAKPVIMGSYGIGVTRMLSAAVEQHLTEHGVAWPK 466

Query: 551 --SPIQAIVT---TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPI 605
             +P    +           E A+++          +  D R E    K  +  +   PI
Sbjct: 467 EIAPFSIHIVQMKMNKDDQTELAEKLEKKFSDK-YDVLYDDRKERAGVKFADADLVGAPI 525

Query: 606 IIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            I  G K A++  + ++R       ++S+ +    + +E
Sbjct: 526 RITVGKK-AADGIVEVKRPTDEKATEMSIDELDKFVNQE 563


>gi|158291808|ref|XP_313346.3| AGAP003589-PA [Anopheles gambiae str. PEST]
 gi|157017465|gb|EAA08954.3| AGAP003589-PA [Anopheles gambiae str. PEST]
          Length = 461

 Score =  121 bits (304), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 68/419 (16%), Positives = 138/419 (32%), Gaps = 54/419 (12%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I + G+G  +      +  Q  +  + R ++    +++  P +    LW++SG      A
Sbjct: 39  IRQAGNGTFYLLPLLQRSLQKAVDLIDRHMEAVGAQKMVLPLLTSAELWKKSGRLSVTEA 98

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSG 375
                +    T +  +   L P +     ++       +YR+ P+RL +  + +R+E   
Sbjct: 99  GT-PTELLQTTDRHGKVQILGPTHEESITSLLAAIAPVTYRQFPLRLYQISTKFRDEMKP 157

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF---------------GF 420
              GLMR + F   D + F   +     C + ++ +   Y                  G 
Sbjct: 158 RF-GLMRAKEFLMKDLYTF---DVDRAGCQETYDSVNEAYGRLFREIGVPFVKVAGDCGT 213

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
               +         VG D L       M    +     S+   +                
Sbjct: 214 MGGSLSHEYHFPSEVGEDELIRCTRCGMHTNAELFPALSERCKSCETGS----------- 262

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMI 539
               D   R                  A      +    PV +    +G  + R +   I
Sbjct: 263 ----DTFERQAGIEVAHAFILEDRYTKALGATCLAANGKPVPLQMGCYGIGVTRLLAASI 318

Query: 540 E----NFKGNLPLWLSPIQAIVTTITSSAVEYAQ------EIANLLKS----HHLSIETD 585
           E      +   P+ L+P +  + T  + + E AQ      ++ + L+S        +  D
Sbjct: 319 EVLSSEKEIRWPVALAPYRVCIITPKAGSKEEAQATPWVGKLHDDLQSLANCAG-DVIVD 377

Query: 586 FRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            R + TI  ++ +      P+I++ G K ASE+ + +    + T   +   D +  + +
Sbjct: 378 DRTQLTIGKRLLDTRKMGYPVIVVVGAKAASEKKLELHDVAAGTEVSLPYSDTLSAVAE 436


>gi|148988004|ref|ZP_01819467.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
 gi|148996688|ref|ZP_01824406.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
 gi|149001621|ref|ZP_01826594.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
 gi|168484646|ref|ZP_02709598.1| prolyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
 gi|168493960|ref|ZP_02718103.1| prolyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
 gi|168576309|ref|ZP_02722192.1| prolyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
 gi|169833273|ref|YP_001693792.1| prolyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
 gi|225860301|ref|YP_002741810.1| prolyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
 gi|237649666|ref|ZP_04523918.1| prolyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974]
 gi|237821366|ref|ZP_04597211.1| prolyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974M2]
 gi|298229643|ref|ZP_06963324.1| prolyl-tRNA synthetase [Streptococcus pneumoniae str. Canada
           MDR_19F]
 gi|298256044|ref|ZP_06979630.1| prolyl-tRNA synthetase [Streptococcus pneumoniae str. Canada
           MDR_19A]
 gi|298502082|ref|YP_003724022.1| proline--tRNA ligase [Streptococcus pneumoniae TCH8431/19A]
 gi|307066942|ref|YP_003875908.1| prolyl-tRNA synthetase [Streptococcus pneumoniae AP200]
 gi|226701344|sp|B1I8Z1|SYP_STRPI RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|254782922|sp|C1CPD8|SYP_STRZT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|147757263|gb|EDK64302.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
 gi|147760079|gb|EDK67068.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
 gi|147926468|gb|EDK77541.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
 gi|168995775|gb|ACA36387.1| prolyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
 gi|172042164|gb|EDT50210.1| prolyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
 gi|183576158|gb|EDT96686.1| prolyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
 gi|183577873|gb|EDT98401.1| prolyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
 gi|225727194|gb|ACO23045.1| prolyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
 gi|298237677|gb|ADI68808.1| proline--tRNA ligase [Streptococcus pneumoniae TCH8431/19A]
 gi|301801205|emb|CBW33879.1| prolyl-tRNA synthetase [Streptococcus pneumoniae INV200]
 gi|306408479|gb|ADM83906.1| Prolyl-tRNA synthetase [Streptococcus pneumoniae AP200]
 gi|327390681|gb|EGE89021.1| prolyl-tRNA synthetase [Streptococcus pneumoniae GA04375]
 gi|332077566|gb|EGI88027.1| prolyl-tRNA synthetase [Streptococcus pneumoniae GA41301]
 gi|332202178|gb|EGJ16247.1| prolyl-tRNA synthetase [Streptococcus pneumoniae GA41317]
 gi|332203430|gb|EGJ17497.1| prolyl-tRNA synthetase [Streptococcus pneumoniae GA47368]
 gi|332204272|gb|EGJ18337.1| prolyl-tRNA synthetase [Streptococcus pneumoniae GA47901]
          Length = 617

 Score =  121 bits (304), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 45/253 (17%), Positives = 96/253 (37%), Gaps = 16/253 (6%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  ++    GV  +     ++ +   + MR++
Sbjct: 4   SKMPIPTLREMPSDAQVISHALMLRAGYVRQVSA---GVYSYLPLANRVIEKAKNIMRQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +     E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     
Sbjct: 61  FEKIGAVEMLAPALLSAELWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           A+    +KSY++LP+ L +    YR+E     +GL+R R F   DA+ F       +   
Sbjct: 116 AIVRDSVKSYKQLPLNLYQIQPKYRDEKRPR-NGLLRTREFIMKDAYSFHANYDSLDSVY 174

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD-----ALWDDAENIMKGVLDTIKNSSQ 460
             +                  +        G D     A+     ++ + V+     +S 
Sbjct: 175 DEYKAAYERIFTRSGLDFKAIIGDGGAMG-GKDSQEFMAITSARTDLDRWVVLDKSVASF 233

Query: 461 DRINTGVLLGEGA 473
           D I   V     A
Sbjct: 234 DEIPAEVQEEIKA 246



 Score = 66.3 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 62/173 (35%), Gaps = 22/173 (12%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S      V   + +  P+++     G       +M ++       
Sbjct: 441 RGIEIGHIFKLGTRYSASMGADVLDENGRAVPIIMGCYGIGVSRLLSAVMEQHARLFVNK 500

Query: 542 ---------FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKS----HHLSIETDFRN 588
                    +  N P  L+P    + T+     E AQ +   L++        + TD RN
Sbjct: 501 TPKGEYRYAWGINFPKELAPFDVHLITVNVKDEE-AQALTEKLEASLMGAGYEVLTDDRN 559

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           E +  K  +  +  +PI I  G K A++  + ++   +  T +V   + +  L
Sbjct: 560 ERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVKIKATGDTIEVHADNVLETL 611


>gi|168492219|ref|ZP_02716362.1| prolyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
 gi|183573637|gb|EDT94165.1| prolyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
          Length = 617

 Score =  121 bits (304), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 45/253 (17%), Positives = 96/253 (37%), Gaps = 16/253 (6%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  ++    GV  +     ++ +   + MR++
Sbjct: 4   SKMPIPTLREMPSDAQVISHALMLRAGYVRQVSA---GVYSYLPLANRVIEKAKNIMRQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +     E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     
Sbjct: 61  FEKIGAVEMLAPALLSAELWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           A+    +KSY++LP+ L +    YR+E     +GL+R R F   DA+ F       +   
Sbjct: 116 AIVRDSVKSYKQLPLNLYQIQPKYRDEKRPR-NGLLRTREFIMKDAYSFHANYDSLDSVY 174

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD-----ALWDDAENIMKGVLDTIKNSSQ 460
             +                  +        G D     A+     ++ + V+     +S 
Sbjct: 175 DEYKAAYERIFTRSGLDFKAIIGDGGAMG-GKDSQEFMAITSARTDLDRWVVLDKSVASF 233

Query: 461 DRINTGVLLGEGA 473
           D I   V     A
Sbjct: 234 DEIPAEVQEEIKA 246



 Score = 66.3 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 62/173 (35%), Gaps = 22/173 (12%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S      V   + +  P+++     G       +M ++       
Sbjct: 441 RGIEIGHIFKLGTRYSASMGADVLDENGRAVPIIMGCYGIGVSRLLSAVMEQHARLFVNK 500

Query: 542 ---------FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKS----HHLSIETDFRN 588
                    +  N P  L+P    + T+     E AQ +   L++        + TD RN
Sbjct: 501 TPKGEYRYAWGINFPKELAPFDVHLITVNVKDEE-AQALTEKLEASLMGAGYEVLTDDRN 559

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           E +  K  +  +  +PI I  G K A++  + ++   +  T +V   + +  L
Sbjct: 560 ERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVKIKATGDTIEVHADNVLETL 611


>gi|149006018|ref|ZP_01829747.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74]
 gi|147762374|gb|EDK69335.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74]
          Length = 617

 Score =  121 bits (304), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 45/253 (17%), Positives = 96/253 (37%), Gaps = 16/253 (6%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  ++    GV  +     ++ +   + MR++
Sbjct: 4   SKMPIPTLREMPSDAQVISHALMLRAGYVRQVSA---GVYSYLPLANRVIEKAKNIMRQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +     E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     
Sbjct: 61  FEKIGAVEMLAPALLSAELWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           A+    +KSY++LP+ L +    YR+E     +GL+R R F   DA+ F       +   
Sbjct: 116 AIVRDSVKSYKQLPLNLYQIQPKYRDEKRPR-NGLLRTREFIMKDAYSFHANYDSLDSVY 174

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD-----ALWDDAENIMKGVLDTIKNSSQ 460
             +                  +        G D     A+     ++ + V+     +S 
Sbjct: 175 DEYKAAYERIFTRSGLDFKAIIGDGGAMG-GKDSQEFMAITSARTDLDRWVVLDKSVASF 233

Query: 461 DRINTGVLLGEGA 473
           D I   V     A
Sbjct: 234 DEIPAEVQEEIKA 246



 Score = 66.3 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 62/173 (35%), Gaps = 22/173 (12%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S      V   + +  P+++     G       +M ++       
Sbjct: 441 RGIEIGHIFKLGTRYSASMGADVLDENGRAVPIIMGCYGIGVSRLLSAVMEQHARLFVNK 500

Query: 542 ---------FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKS----HHLSIETDFRN 588
                    +  N P  L+P    + T+     E AQ +   L++        + TD RN
Sbjct: 501 TPKGEYRYAWGINFPKELAPFDVHLITVNVKDEE-AQALTEKLEASLMGAGYEVLTDDRN 559

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           E +  K  +  +  +PI I  G K A++  + ++   +  T +V   + +  L
Sbjct: 560 ERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVKIKATGDTIEVHADNVLETL 611


>gi|303255041|ref|ZP_07341117.1| prolyl-tRNA synthetase [Streptococcus pneumoniae BS455]
 gi|302597871|gb|EFL64941.1| prolyl-tRNA synthetase [Streptococcus pneumoniae BS455]
          Length = 617

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 45/253 (17%), Positives = 96/253 (37%), Gaps = 16/253 (6%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  ++    GV  +     ++ +   + MR++
Sbjct: 4   SKMPIPTLREMPSDAQVISHALMLRAGYVRQVSA---GVYSYLPLANRVIEKAKNIMRQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +     E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     
Sbjct: 61  FEKIGAVEMLAPALLSAELWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           A+    +KSY++LP+ L +    YR+E     +GL+R R F   DA+ F       +   
Sbjct: 116 AIVRDSVKSYKQLPLNLYQIQPKYRDEKRPR-NGLLRTREFIMKDAYSFHANYDSLDSVY 174

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD-----ALWDDAENIMKGVLDTIKNSSQ 460
             +                  +        G D     A+     ++ + V+     +S 
Sbjct: 175 DEYKAAYERIFTRSGLDFKAIIGDGGAMG-GKDSQEFMAITSARTDLDRWVVLDKSVASF 233

Query: 461 DRINTGVLLGEGA 473
           D I   V     A
Sbjct: 234 DEIPAEVQEEIKA 246



 Score = 66.3 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 63/173 (36%), Gaps = 22/173 (12%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S      V   + +  P+++     G       +M ++       
Sbjct: 441 RGIEIGHIFKLGTRYSASMGADVLDENGRAVPIIMGCYGIGVSRLLSAVMEQHARLFVNK 500

Query: 542 ---------FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKS----HHLSIETDFRN 588
                    +  N P  L+P+   + T+     E AQ +   L++        + TD RN
Sbjct: 501 TPKGEYRYAWGINFPKELAPLDVHLITVNVKDEE-AQALTEKLEASLMGAGYEVLTDDRN 559

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           E +  K  +  +  +PI I  G K A++  + ++   +  T +V   + +  L
Sbjct: 560 ERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVKIKATGDTIEVHADNVLETL 611


>gi|225858114|ref|YP_002739624.1| prolyl-tRNA synthetase [Streptococcus pneumoniae 70585]
 gi|254782917|sp|C1CB39|SYP_STRP7 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|225721841|gb|ACO17695.1| prolyl-tRNA synthetase [Streptococcus pneumoniae 70585]
          Length = 617

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 45/253 (17%), Positives = 96/253 (37%), Gaps = 16/253 (6%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  ++    GV  +     ++ +   + MR++
Sbjct: 4   SKMPIPTLREMPSDAQVISHALMLRAGYVRQVSA---GVYSYLPLANRVIEKAKNIMRQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +     E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     
Sbjct: 61  FEKIGAVEMLAPALLSAELWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           A+    +KSY++LP+ L +    YR+E     +GL+R R F   DA+ F       +   
Sbjct: 116 AIVRDSVKSYKQLPLNLYQIQPKYRDEKRPR-NGLLRTREFIMKDAYSFHANYDSLDSVY 174

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD-----ALWDDAENIMKGVLDTIKNSSQ 460
             +                  +        G D     A+     ++ + V+     +S 
Sbjct: 175 DEYKAAYERIFTRSGLDFKAIIGDGGAMG-GKDSQEFMAITSARTDLDRWVVLDKSVASF 233

Query: 461 DRINTGVLLGEGA 473
           D I   V     A
Sbjct: 234 DEIPAEVQEEIKA 246



 Score = 66.3 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 62/173 (35%), Gaps = 22/173 (12%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S      V   + +  P+++     G       +M ++       
Sbjct: 441 RGIEIGHIFKLGTRYSASMGADVLDENGRAVPIIMGCYGIGVSRLLSAVMEQHARLFVNK 500

Query: 542 ---------FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKS----HHLSIETDFRN 588
                    +  N P  L+P    + T+     E AQ +   L++        + TD RN
Sbjct: 501 TPKGEYRYAWGINFPKELAPFDVHLITVNVKDEE-AQALTEKLEASLMGAGYEVLTDDRN 559

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           E +  K  +  +  +PI I  G K A++  + ++   +  T +V   + +  L
Sbjct: 560 ERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVKIKATGDTIEVHADNVLETL 611


>gi|15900198|ref|NP_344802.1| prolyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
 gi|81855097|sp|Q97SR1|SYP_STRPN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|14971734|gb|AAK74442.1| prolyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
          Length = 617

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 45/253 (17%), Positives = 96/253 (37%), Gaps = 16/253 (6%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  ++    GV  +     ++ +   + MR++
Sbjct: 4   SKMPIPTLREMPSDAQVISHALMLRAGYVRQVSA---GVYSYLPLANRVIEKAKNIMRQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +     E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     
Sbjct: 61  FEKIGAVEMLAPALLSAELWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           A+    +KSY++LP+ L +    YR+E     +GL+R R F   DA+ F       +   
Sbjct: 116 AIVRDSVKSYKQLPLNLYQIQPKYRDEKRPR-NGLLRTREFIMKDAYSFHANYDSLDSVY 174

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD-----ALWDDAENIMKGVLDTIKNSSQ 460
             +                  +        G D     A+     ++ + V+     +S 
Sbjct: 175 DEYKAAYERIFTRSGLDFKAIIGDGGAMG-GKDSQEFMAITSARTDLDRWVVLDKSVASF 233

Query: 461 DRINTGVLLGEGA 473
           D I   V     A
Sbjct: 234 DEIPAEVQEEIKA 246



 Score = 66.3 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 62/173 (35%), Gaps = 22/173 (12%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S      V   + +  P+++     G       +M ++       
Sbjct: 441 RGIEIGHIFKLGTRYSASMGADVLDENGRAVPIIMGCYGIGVSRLLSAVMEQHARLFVNK 500

Query: 542 ---------FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKS----HHLSIETDFRN 588
                    +  N P  L+P    + T+     E AQ +   L++        + TD RN
Sbjct: 501 TPKGEYRYAWGINFPKELAPFDVHLITVNVKDEE-AQALTEKLEASLMGAGYEVLTDDRN 559

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           E +  K  +  +  +PI I  G K A++  + ++   +  T +V   + +  L
Sbjct: 560 ERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVKIKATGDTIEVHADNVLETL 611


>gi|301793532|emb|CBW35907.1| prolyl-tRNA synthetase [Streptococcus pneumoniae INV104]
          Length = 617

 Score =  121 bits (303), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 45/253 (17%), Positives = 96/253 (37%), Gaps = 16/253 (6%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  ++    GV  +     ++ +   + MR++
Sbjct: 4   SKMPIPTLREMPSDAQVISHALMLRAGYVRQVSA---GVYSYLPLANRVIEKAKNIMRQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +     E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     
Sbjct: 61  FEKIGAVEMLAPALLSAELWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           A+    +KSY++LP+ L +    YR+E     +GL+R R F   DA+ F       +   
Sbjct: 116 AIVRDSVKSYKQLPLNLYQIQPKYRDEKRPR-NGLLRTREFIMKDAYSFHANYDSLDSVY 174

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD-----ALWDDAENIMKGVLDTIKNSSQ 460
             +                  +        G D     A+     ++ + V+     +S 
Sbjct: 175 DEYKAAYERIFTRSGLDFKAIIGDGGAMG-GKDSQEFMAITSARTDLDRWVVLDKSVASF 233

Query: 461 DRINTGVLLGEGA 473
           D I   V     A
Sbjct: 234 DEIPAEVQEEIKA 246



 Score = 64.8 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 30/172 (17%), Positives = 60/172 (34%), Gaps = 20/172 (11%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S      V   + +  P+++     G       +M ++       
Sbjct: 441 RGIEIGHIFKLGTRYSASMGADVLDENGRAVPIIMGCYGIGVSRLLSAVMEQHARLFVNK 500

Query: 542 ---------FKGNLPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNE 589
                    +  N P  L+P    + T+      A    +++   L      + TD RNE
Sbjct: 501 TPKGEYRYAWGINFPKELAPFDVHLITVNVKDEEAQALIEKLEASLMGDGYEVLTDDRNE 560

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            +  K  +  +  +PI I  G K A++  + ++   +  T +V   + +  L
Sbjct: 561 RVGVKFSDSDLIGLPIRITVGKK-AADGIVEVKIKATGDTIEVHADNVLETL 611


>gi|148983669|ref|ZP_01816988.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
 gi|147923816|gb|EDK74928.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
 gi|301799407|emb|CBW31944.1| prolyl-tRNA synthetase [Streptococcus pneumoniae OXC141]
          Length = 617

 Score =  121 bits (303), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 45/253 (17%), Positives = 96/253 (37%), Gaps = 16/253 (6%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  ++    GV  +     ++ +   + MR++
Sbjct: 4   SKMPIPTLREMPSDAQVISHALMLRAGYVRQVSA---GVYSYLPLANRVIEKAKNIMRQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +     E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     
Sbjct: 61  FEKIGAVEMLAPALLSAELWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           A+    +KSY++LP+ L +    YR+E     +GL+R R F   DA+ F       +   
Sbjct: 116 AIVRDSVKSYKQLPLNLYQIQPKYRDEKRPR-NGLLRTREFIMKDAYSFHANYDSLDSVY 174

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD-----ALWDDAENIMKGVLDTIKNSSQ 460
             +                  +        G D     A+     ++ + V+     +S 
Sbjct: 175 DEYKAAYERIFTRSGLDFKAIIGDGGAMG-GKDSQEFMAITSARTDLDRWVVLDKSVASF 233

Query: 461 DRINTGVLLGEGA 473
           D I   V     A
Sbjct: 234 DEIPAEVQEEIKA 246



 Score = 66.3 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 62/173 (35%), Gaps = 22/173 (12%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S      V   + +  P+++     G       +M ++       
Sbjct: 441 RGIEIGHIFKLGTRYSASMGADVLDENGRAVPIIMGCYGIGVSRLLSAVMEQHARLFVNK 500

Query: 542 ---------FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKS----HHLSIETDFRN 588
                    +  N P  L+P    + T+     E AQ +   L++        + TD RN
Sbjct: 501 TPKGEYRYAWGINFPKELAPFDVHLITVNVKDEE-AQALTEKLEASLMGAGYEVLTDDRN 559

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           E +  K  +  +  +PI I  G K A++  + ++   +  T +V   + +  L
Sbjct: 560 ERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVKIKATGDTIEVHADNVLETL 611


>gi|322388633|ref|ZP_08062233.1| proline--tRNA ligase [Streptococcus infantis ATCC 700779]
 gi|321140553|gb|EFX36058.1| proline--tRNA ligase [Streptococcus infantis ATCC 700779]
          Length = 617

 Score =  121 bits (303), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 78/192 (40%), Gaps = 10/192 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  ++    GV  +     ++ +   + MR++
Sbjct: 4   SKMLIPTLREMPSDAQVISHALMLRAGYVRQVSA---GVYSYLPLANRVIEKAKNIMRQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
                  E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     
Sbjct: 61  FDKMGAVEMLAPALLSADLWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           A+    +KSY++LP+ L +    YR+E     +GL+R R F   D + F       +   
Sbjct: 116 AIVRDSVKSYKQLPLNLYQIQPKYRDEKRPR-NGLLRTREFIMKDGYSFHANYDSLDVTY 174

Query: 406 KIHNLIISIYKD 417
             +         
Sbjct: 175 DEYKAAYERIFT 186



 Score = 67.1 bits (162), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 34/177 (19%), Positives = 65/177 (36%), Gaps = 23/177 (12%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S      V   + +  P+++     G       +M ++       
Sbjct: 441 RGIEIGHIFKLGTRYSASMGADVLDENGRAVPIIMGCYGIGVSRLLSAVMEQHARLFVNK 500

Query: 542 ---------FKGNLPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNE 589
                    +  N P  L+P    +  +     +++     I   L +    + TD RNE
Sbjct: 501 TPKGEYRYAWGINFPKELAPFDVHLIPVNVKDEASLALTDRIEEALVNKGYEVLTDDRNE 560

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV---SLLDAIPILTK 643
            +  K  +  +  +PI I  G K A++  + ++   +  T +V   SLL+ + ILT 
Sbjct: 561 RVGVKFSDSDLIGLPIRITVGKK-AADGIVEVKIKATGDTIEVHADSLLETLEILTN 616


>gi|239626719|ref|ZP_04669750.1| phosphoribulokinase/uridine kinase [Clostridiales bacterium
           1_7_47_FAA]
 gi|239516865|gb|EEQ56731.1| phosphoribulokinase/uridine kinase [Clostridiales bacterium
           1_7_47FAA]
          Length = 550

 Score =  121 bits (303), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 50/208 (24%), Positives = 88/208 (42%), Gaps = 4/208 (1%)

Query: 11  DGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIEIITPEDPRSL 70
           +G ++ +P   T  +VAE          + V +NGK+ +L   V++  +  IT  D   L
Sbjct: 7   NGFVREYPEGTTWLEVAEEYQYQYEDDILLVRVNGKLQELHKHVKDCELTFITARDKPGL 66

Query: 71  AVIRHSCAHIMAEAVQSIWPEVQ---VAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQ 127
           A  + S   IM +A  ++        + I   +  GF+ +        +D L +++ KM 
Sbjct: 67  ATYQRSACLIMLKAFYAVAGAENIEKIVIDFSLGRGFFVEARGNFVLDNDLLIRVKNKMA 126

Query: 128 EIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPH 187
           E +A+  P +K+ +S + A ELF   +   K E L        V +Y    + D   G  
Sbjct: 127 EYVAQQIPIMKRSVSTDDAVELFHRHRMYDK-ERLFRYRRVSRVNIYSIDGFEDYYYGYM 185

Query: 188 VRSTGQVKKFFKLMKVAGAYWRGDSNRP 215
           V++TG ++ F  +    G      S   
Sbjct: 186 VQNTGYIRYFDLVPYHYGFVLLLPSKSE 213


>gi|307708104|ref|ZP_07644572.1| prolyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
 gi|307615889|gb|EFN95094.1| prolyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
          Length = 617

 Score =  121 bits (303), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 36/192 (18%), Positives = 79/192 (41%), Gaps = 10/192 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  ++    GV  +     ++ +   + MR++
Sbjct: 4   SKMPIPTLREMPSDAQVISHALMLRAGYVRQVSA---GVYSYLPLANRVIEKAKNIMRQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
                  E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     
Sbjct: 61  FDKIGAVEMLAPALLSAELWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           A+    +KSY++LP+ L +    YR+E     +GL+R R F   DA+ F       +   
Sbjct: 116 AIVRDSVKSYKQLPLNLYQIQPKYRDEKRPR-NGLLRTREFIMKDAYSFHANYDSLDSVY 174

Query: 406 KIHNLIISIYKD 417
             +         
Sbjct: 175 DEYKAAYERIFT 186



 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/177 (19%), Positives = 66/177 (37%), Gaps = 23/177 (12%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S      V   + +  P+++     G       +M ++       
Sbjct: 441 RGIEIGHIFKLGTRYSASMGADVLDENGRAVPIIMGCYGIGVSRLLSAVMEQHARLFVNK 500

Query: 542 ---------FKGNLPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNE 589
                    +  N P  L+P    + T+      A    +++   L      + TD RNE
Sbjct: 501 TPKGEYRYAWGINFPKELAPFDVHLITVNVKDDEAQALTEKLEASLMGAGYEVLTDDRNE 560

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV---SLLDAIPILTK 643
            +  K  +  +  +PI I  G K A++  + ++   +  T +V   +LL+ + IL+K
Sbjct: 561 RVGVKFSDSDLIGLPIRITVGKK-AADGIVEVKIKATGDTIEVHADNLLETLEILSK 616


>gi|206889362|ref|YP_002248875.1| prolyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM 11347]
 gi|226701352|sp|B5YKW0|SYP_THEYD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|206741300|gb|ACI20357.1| prolyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM 11347]
          Length = 571

 Score =  121 bits (303), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 36/216 (16%), Positives = 83/216 (38%), Gaps = 11/216 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +              H  + +   +  +A    G+  +   GW++   +   ++ +
Sbjct: 4   SKLFIPTMREIPSGINAISHILMLKAGYVRQLAA---GLFIFLPLGWRVLNKINMILKEE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++    +EI+ P +    +WQ++G W + +  MF +K      +  R   L   +     
Sbjct: 61  MERIGAQEISMPILHPAEIWQETGRWYTIKEEMFRLKD-----RTGRDMCLGMTHEEIMT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            + +  +KSYR+LP    +  +  R+E      G++R R F   D++ F    +  ++  
Sbjct: 116 WIASKEIKSYRQLPQIWYQIQTKLRDEARPR-GGVLRTREFIMKDSYSFDIDWEGLDKSY 174

Query: 406 KIH-NLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            +H      I+   G +   V+        + S   
Sbjct: 175 NLHAEAYHRIFTKCGLKYYQVESDPGIMGDMESHEF 210



 Score = 73.7 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 60/159 (37%), Gaps = 14/159 (8%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL---SPIQ 554
           +        +A++++    K  P+++     G        + +N   +  +W    SP  
Sbjct: 408 LGTKYTEPLHAYFLDKDG-KEKPIIMGSYGIGPARVAAAAIEQNHDSDGIIWPKSISPFD 466

Query: 555 AIVTT----------ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             +            I     E   EI N     H+ +  D R+E    K ++  +  IP
Sbjct: 467 IEIIPLNMDDEKTVSIAEELYEKVTEIYNSFADRHMEVLIDDRDERPGVKFKDADLIGIP 526

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           I I+ G K   E  + I++  +  T+KVS+  A+  +  
Sbjct: 527 IQIVIGKKGLKENKVEIKKRRTKETKKVSVNKAVVEIVN 565


>gi|149017957|ref|ZP_01834416.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
 gi|147931521|gb|EDK82499.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
          Length = 617

 Score =  121 bits (303), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 45/253 (17%), Positives = 96/253 (37%), Gaps = 16/253 (6%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  ++    GV  +     ++ +   + MR++
Sbjct: 4   SKMPIPTLREMSSDAQVISHALMLRAGYVRQVSA---GVYSYLPLANRVIEKAKNIMRQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +     E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     
Sbjct: 61  FEKIGAVEMLAPTLLSAELWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           A+    +KSY++LP+ L +    YR+E     +GL+R R F   DA+ F       +   
Sbjct: 116 AIVRDSVKSYKQLPLNLYQIQPKYRDEKRPR-NGLLRTREFIMKDAYSFHANYDSLDSVY 174

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD-----ALWDDAENIMKGVLDTIKNSSQ 460
             +                  +        G D     A+     ++ + V+     +S 
Sbjct: 175 DEYKAAYERIFTRSGLDFKAIIGDGGAMG-GKDSQEFMAITSARTDLDRWVVLDKSVASF 233

Query: 461 DRINTGVLLGEGA 473
           D I   V     A
Sbjct: 234 DEIPAEVQEEIKA 246



 Score = 66.3 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 62/173 (35%), Gaps = 22/173 (12%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S      V   + +  P+++     G       +M ++       
Sbjct: 441 RGIEIGHIFKLGTRYSASMGADVLDENGRAVPIIMGCYGIGVSRLLSAVMEQHARLFVNK 500

Query: 542 ---------FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKS----HHLSIETDFRN 588
                    +  N P  L+P    + T+     E AQ +   L++        + TD RN
Sbjct: 501 TPKGEYRYAWGINFPKELAPFDVHLITVNVKDEE-AQALTEKLEASLMGAGYEVLTDDRN 559

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           E +  K  +  +  +PI I  G K A++  + ++   +  T +V   + +  L
Sbjct: 560 ERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVKIKATGDTIEVHADNVLETL 611


>gi|322377188|ref|ZP_08051680.1| proline--tRNA ligase [Streptococcus sp. M334]
 gi|321281901|gb|EFX58909.1| proline--tRNA ligase [Streptococcus sp. M334]
          Length = 617

 Score =  121 bits (303), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 36/192 (18%), Positives = 79/192 (41%), Gaps = 10/192 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  ++    GV  +     ++ +   + MR++
Sbjct: 4   SKMPIPTLREMPSDAQVISHALMLRAGYVRQVSA---GVYSYLPLANRVIEKAKNIMRQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
                  E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     
Sbjct: 61  FDKIGAVEMLAPALLSAELWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           A+    +KSY++LP+ L +    YR+E     +GL+R R F   DA+ F       +   
Sbjct: 116 AIVRDSVKSYKQLPLNLYQIQPKYRDEKRPR-NGLLRTREFIMKDAYSFHANYDSLDSVY 174

Query: 406 KIHNLIISIYKD 417
             +         
Sbjct: 175 DEYKAAYERIFT 186



 Score = 66.3 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/178 (20%), Positives = 68/178 (38%), Gaps = 25/178 (14%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S      V   + +  P+++     G       +M ++       
Sbjct: 441 RGIEIGHIFKLGTRYSASMGADVLDENGRAVPIIMGCYGIGVSRLLSAVMEQHARLFVNK 500

Query: 542 ---------FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKS----HHLSIETDFRN 588
                    +  N P  L+P    + T+     E AQ +   L++        + TD RN
Sbjct: 501 TPKGEYRYAWGINFPKELAPFDVHLITVNVKDEE-AQALTEKLEASLMGAGYEVLTDDRN 559

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV---SLLDAIPILTK 643
           E +  K  +  +  +PI I  G K A++  + ++   +  T +V   +LL+ + IL+K
Sbjct: 560 ERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVKIKATGDTIEVHADNLLETLEILSK 616


>gi|307709960|ref|ZP_07646407.1| prolyl-tRNA synthetase [Streptococcus mitis SK564]
 gi|307619331|gb|EFN98460.1| prolyl-tRNA synthetase [Streptococcus mitis SK564]
          Length = 617

 Score =  121 bits (303), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 36/192 (18%), Positives = 79/192 (41%), Gaps = 10/192 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  ++    GV  +     ++ +   + MR++
Sbjct: 4   SKMPIPTLREMPSDAQVISHALMLRAGYVRQVSA---GVYSYLPLANRVIEKAKNIMRQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
                  E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     
Sbjct: 61  FDKIGAVEMLAPALLSAELWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           A+    +KSY++LP+ L +    YR+E     +GL+R R F   DA+ F       +   
Sbjct: 116 AIVRDSVKSYKQLPLNLYQIQPKYRDEKRPR-NGLLRTREFIMKDAYSFHANYDSLDSVY 174

Query: 406 KIHNLIISIYKD 417
             +         
Sbjct: 175 DEYKAAYERIFT 186



 Score = 66.3 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/178 (20%), Positives = 68/178 (38%), Gaps = 25/178 (14%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S      V   + +  P+++     G       +M ++       
Sbjct: 441 RGIEIGHIFKLGTRYSASMGADVLDENGRAVPIIMGCYGIGVSRLLSAVMEQHARLFVNK 500

Query: 542 ---------FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKS----HHLSIETDFRN 588
                    +  N P  L+P    + T+     E AQ +   L++        + TD RN
Sbjct: 501 TPKGEYRYAWGINFPKELAPFDVHLITVNVKDEE-AQALTEKLEASLMGAGYEVLTDDRN 559

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV---SLLDAIPILTK 643
           E +  K  +  +  +PI I  G K A++  + ++   +  T +V   +LL+ + IL+K
Sbjct: 560 ERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVKIKATGDTIEVHADNLLETLEILSK 616


>gi|221231165|ref|YP_002510317.1| prolyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669]
 gi|225853864|ref|YP_002735376.1| prolyl-tRNA synthetase [Streptococcus pneumoniae JJA]
 gi|254782918|sp|B8ZKT3|SYP_STRPJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|254782920|sp|C1CC55|SYP_STRZJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|220673625|emb|CAR68112.1| prolyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669]
 gi|225723520|gb|ACO19373.1| prolyl-tRNA synthetase [Streptococcus pneumoniae JJA]
 gi|332076711|gb|EGI87173.1| prolyl-tRNA synthetase [Streptococcus pneumoniae GA17545]
          Length = 617

 Score =  121 bits (303), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 45/253 (17%), Positives = 96/253 (37%), Gaps = 16/253 (6%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  ++    GV  +     ++ +   + MR++
Sbjct: 4   SKMPIPTLREMPSDAQVISHALMLRAGYVRQVSA---GVYSYLPLANRVIEKAKNIMRQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +     E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     
Sbjct: 61  FEKIGAVEMLAPTLLSAELWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           A+    +KSY++LP+ L +    YR+E     +GL+R R F   DA+ F       +   
Sbjct: 116 AIVRDSVKSYKQLPLNLYQIQPKYRDEKRPR-NGLLRTREFIMKDAYSFHANYDSLDSVY 174

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD-----ALWDDAENIMKGVLDTIKNSSQ 460
             +                  +        G D     A+     ++ + V+     +S 
Sbjct: 175 DEYKAAYERIFTRSGLDFKAIIGDGGAMG-GKDSQEFMAITSARTDLDRWVVLDKSVASF 233

Query: 461 DRINTGVLLGEGA 473
           D I   V     A
Sbjct: 234 DEIPAEVQEEIKA 246



 Score = 66.3 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 62/173 (35%), Gaps = 22/173 (12%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S      V   + +  P+++     G       +M ++       
Sbjct: 441 RGIEIGHIFKLGTRYSASMGADVLDENGRAVPIIMGCYGIGVSRLLSAVMEQHARLFVNK 500

Query: 542 ---------FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKS----HHLSIETDFRN 588
                    +  N P  L+P    + T+     E AQ +   L++        + TD RN
Sbjct: 501 TPKGEYRYAWGINFPKELAPFDVHLITVNVKDEE-AQALTEKLEASLMGAGYEVLTDDRN 559

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           E +  K  +  +  +PI I  G K A++  + ++   +  T +V   + +  L
Sbjct: 560 ERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVKIKATGDTIEVHADNVLETL 611


>gi|154175003|ref|YP_001408388.1| prolyl-tRNA synthetase [Campylobacter curvus 525.92]
 gi|166980112|sp|A7GYU6|SYP_CAMC5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|112802606|gb|EAT99950.1| prolyl-tRNA synthetase [Campylobacter curvus 525.92]
          Length = 567

 Score =  121 bits (303), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 49/265 (18%), Positives = 93/265 (35%), Gaps = 22/265 (8%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++          +++    H  L R      + + GSG+  +   G  +   +   ++ 
Sbjct: 3   FSKFYAPTTKEAPKDASLPSHIFLVRGG---FVEQIGSGLYNFLPLGKMMLDKITKVVKE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E++   V    LW+QSG ++ +   +   K   +       F L P N    
Sbjct: 60  EMDAAGVLEVSFSVVTSGELWKQSGRFNVFGKELLRFKDRKEN-----DFVLSPTNEEAA 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           VA+    + SY++LP+ + +  + +R+E      GL+R R FT  DA+ F   E      
Sbjct: 115 VALVRGKVTSYKQLPLNIYQINTKFRDEARPRF-GLLRGREFTMKDAYSFHANEADMKRE 173

Query: 405 LKIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL----------- 452
             +       I+   G     V+  +      GS      A+N    +L           
Sbjct: 174 FDLMEATYSKIFTRLGLNFRAVEADSGAIGGSGSKEFMVLAKNGEDDILCCDSCKYAANV 233

Query: 453 DTIKNSSQDRINTGVLLGEGAFYGP 477
           +  K + +             FY P
Sbjct: 234 EAAKRAKKTSDAPAPQADATKFYTP 258



 Score = 82.5 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 32/175 (18%), Positives = 68/175 (38%), Gaps = 11/175 (6%)

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
            PK    L+ + G +      Q+ +   S   A +++ +  K  P ++     G   R I
Sbjct: 394 CPKCGGKLELSKGIEV-GHIFQLGYKYSSAMGATFLDENG-KARPFLMGCYGIGVS-RLI 450

Query: 536 GIMIE-NFKGNLPLW---LSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRN 588
            +M+E +      +W    +P +  +        + V++A ++   L++  L +  D RN
Sbjct: 451 AVMVEASHDDRGCVWKKECTPFECEIVISNLKDEAGVKFATKLYENLRNLGLCVLLDDRN 510

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           E    K+ +  +   P  II G K      + +        + V   + + +L +
Sbjct: 511 ERFGVKMNDFELLGFPYAIIVG-KGLENGEVELITRDGLVKEVVKKDEILSVLKE 564


>gi|15902287|ref|NP_357837.1| prolyl-tRNA synthetase [Streptococcus pneumoniae R6]
 gi|116515963|ref|YP_815764.1| prolyl-tRNA synthetase [Streptococcus pneumoniae D39]
 gi|81845175|sp|Q8DRB0|SYP_STRR6 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|122279350|sp|Q04MI4|SYP_STRP2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|15457791|gb|AAK99047.1| Prolyl-tRNA synthetase [Streptococcus pneumoniae R6]
 gi|116076539|gb|ABJ54259.1| prolyl-tRNA synthetase [Streptococcus pneumoniae D39]
          Length = 617

 Score =  121 bits (303), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 36/192 (18%), Positives = 80/192 (41%), Gaps = 10/192 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  ++    GV  +     ++ +   + MR++
Sbjct: 4   SKMPIPTLREMPSDAQVISHALMLRAGYVRQVSA---GVYSYLPLANRVIEKAKNIMRQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +     E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     
Sbjct: 61  FEKIGAVEMLAPALLSAELWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           A+    +KSY++LP+ L +    YR+E     +GL+R R F   DA+ F       +   
Sbjct: 116 AIVRDSVKSYKQLPLNLYQIQPKYRDEKRPR-NGLLRTREFIMKDAYSFHANYDSLDSVY 174

Query: 406 KIHNLIISIYKD 417
             +         
Sbjct: 175 DEYKAAYERIFT 186



 Score = 66.3 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 62/173 (35%), Gaps = 22/173 (12%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S      V   + +  P+++     G       +M ++       
Sbjct: 441 RGIEIGHIFKLGTRYSASMGADVLDENGRAVPIIMGCYGIGVSRLLSAVMEQHARLFVNK 500

Query: 542 ---------FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKS----HHLSIETDFRN 588
                    +  N P  L+P    + T+     E AQ +   L++        + TD RN
Sbjct: 501 TPKGEYRYAWGINFPKELAPFDVHLITVNVKDEE-AQALTEKLEASLMGAGYEVLTDDRN 559

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           E +  K  +  +  +PI I  G K A++  + ++   +  T +V   + +  L
Sbjct: 560 ERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVKIKATGDTIEVHADNVLETL 611


>gi|307710999|ref|ZP_07647421.1| prolyl-tRNA synthetase [Streptococcus mitis SK321]
 gi|307616961|gb|EFN96139.1| prolyl-tRNA synthetase [Streptococcus mitis SK321]
          Length = 617

 Score =  121 bits (303), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 36/192 (18%), Positives = 79/192 (41%), Gaps = 10/192 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  ++    GV  +     ++ +   + MR++
Sbjct: 4   SKMPIPTLREMPSDAQVISHALMLRAGYVRQVSA---GVYSYLPLANRVIEKAKNIMRQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
                  E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     
Sbjct: 61  FDKIGAVEMLAPALLSAELWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           A+    +KSY++LP+ L +    YR+E     +GL+R R F   DA+ F       +   
Sbjct: 116 AIVRDSVKSYKQLPLNLYQIQPKYRDEKRPR-NGLLRTREFIMKDAYSFHANYDSLDSVY 174

Query: 406 KIHNLIISIYKD 417
             +         
Sbjct: 175 DEYKAAYERIFT 186



 Score = 66.3 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/178 (20%), Positives = 68/178 (38%), Gaps = 25/178 (14%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S      V   + +  P+++     G       +M ++       
Sbjct: 441 RGIEIGHIFKLGTRYSASMGADVLDENGRAVPIIMGCYGIGVSRLLSAVMEQHARLFVNK 500

Query: 542 ---------FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKS----HHLSIETDFRN 588
                    +  N P  L+P    + T+     E AQ +   L++        + TD RN
Sbjct: 501 TPKGEYRYAWGINFPKELAPFDVHLITVNVKDEE-AQALTEKLEASLMGAGYEVLTDDRN 559

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV---SLLDAIPILTK 643
           E +  K  +  +  +PI I  G K A++  + ++   +  T +V   +LL+ + IL+K
Sbjct: 560 ERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVKIKATGDTIEVHADNLLETLEILSK 616


>gi|289168683|ref|YP_003446952.1| prolyl-tRNA synthetase [Streptococcus mitis B6]
 gi|288908250|emb|CBJ23092.1| prolyl-tRNA synthetase [Streptococcus mitis B6]
          Length = 617

 Score =  121 bits (303), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 36/192 (18%), Positives = 79/192 (41%), Gaps = 10/192 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  ++    GV  +     ++ +   + MR++
Sbjct: 4   SKMPIPTLREMPSDAQVISHALMLRAGYVRQVSA---GVYSYLPLANRVIEKAKNIMRQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
                  E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     
Sbjct: 61  FDKIGAVEMLAPALLSAELWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           A+    +KSY++LP+ L +    YR+E     +GL+R R F   DA+ F       +   
Sbjct: 116 AIVRDSVKSYKQLPLNLYQIQPKYRDEKRPR-NGLLRTREFIMKDAYSFHANYDSLDSVY 174

Query: 406 KIHNLIISIYKD 417
             +         
Sbjct: 175 DEYKAAYERIFT 186



 Score = 66.3 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/178 (20%), Positives = 68/178 (38%), Gaps = 25/178 (14%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S      V   + +  P+++     G       +M ++       
Sbjct: 441 RGIEIGHIFKLGTRYSASMGADVLDENGRAVPIIMGCYGIGVSRLLSAVMEQHARLFVNK 500

Query: 542 ---------FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKS----HHLSIETDFRN 588
                    +  N P  L+P    + T+     E AQ +   L++        + TD RN
Sbjct: 501 TPKGEYRYAWGINFPKELAPFDVHLITVNVKDEE-AQALTEKLEASLMGAGYEVLTDDRN 559

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV---SLLDAIPILTK 643
           E +  K  +  +  +PI I  G K A++  + ++   +  T +V   +LL+ + IL+K
Sbjct: 560 ERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVKIKATGDTIEVHADNLLETLEILSK 616


>gi|306828825|ref|ZP_07462017.1| proline--tRNA ligase [Streptococcus mitis ATCC 6249]
 gi|304429003|gb|EFM32091.1| proline--tRNA ligase [Streptococcus mitis ATCC 6249]
          Length = 617

 Score =  121 bits (303), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 43/252 (17%), Positives = 93/252 (36%), Gaps = 14/252 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  ++    GV  +     ++ +   + MR++
Sbjct: 4   SKMLIPTLREMPSDAQVISHALMLRAGYVRQVSA---GVYSYLPLANRVIEKAKNIMRQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
                  E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     
Sbjct: 61  FDKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           A+    +KSY++LP+ L +    YR+E     +GL+R R F   D + F       +   
Sbjct: 116 AIVRDSVKSYKQLPLNLYQIQPKYRDEKRPR-NGLLRTREFIMKDGYSFHANYDSLDVTY 174

Query: 406 KIHNLIISIYKDF-GFEKIMVKLSTRPEKRVGSDALWDDA---ENIMKGVLDTIKNSSQD 461
             +           G +   +           S           ++ + V+     +S D
Sbjct: 175 DEYKAAYERIFTRSGLDFKAIIGDGGAMGGKDSQEFMAITPARTDLDRWVVLDKSVASFD 234

Query: 462 RINTGVLLGEGA 473
            I   V     A
Sbjct: 235 EIPEEVQEEIKA 246



 Score = 66.0 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/179 (20%), Positives = 69/179 (38%), Gaps = 27/179 (15%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG---- 544
           R  + G I       S      V   + +  P+++     G   R +  ++E        
Sbjct: 441 RGIEIGHIFKLGTRYSASMGADVLDENGRAVPIIMGCYGIGVS-RLLSAVMEQHARLFVN 499

Query: 545 -------------NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKS----HHLSIETDFR 587
                        N P  L+P    + T+ +   E AQ +   L++        + TD R
Sbjct: 500 KTPKGEYRYAWGVNFPKELAPFDVHLITVNAKDEE-AQALTEKLEANLMGAGYEVLTDDR 558

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV---SLLDAIPILTK 643
           NE +  K  +  +  +PI I  G K A++  + ++   +  T +V   +LL+ + IL+K
Sbjct: 559 NERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVKIKATGDTIEVHADNLLETLEILSK 616


>gi|307704119|ref|ZP_07641047.1| prolyl-tRNA synthetase [Streptococcus mitis SK597]
 gi|307622341|gb|EFO01350.1| prolyl-tRNA synthetase [Streptococcus mitis SK597]
          Length = 617

 Score =  121 bits (303), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 36/192 (18%), Positives = 79/192 (41%), Gaps = 10/192 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  ++    GV  +     ++ +   + MR++
Sbjct: 4   SKMPIPTLREMPSDAQVISHALMLRAGYVRQVSA---GVYSYLPLANRVIEKAKNIMRQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
                  E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     
Sbjct: 61  FDKIGAVEMLAPALLSAELWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           A+    +KSY++LP+ L +    YR+E     +GL+R R F   DA+ F       +   
Sbjct: 116 AIVRDSVKSYKQLPLNLYQIQPKYRDEKRPR-NGLLRTREFIMKDAYSFHANYDSLDSVY 174

Query: 406 KIHNLIISIYKD 417
             +         
Sbjct: 175 DEYKAAYERIFT 186



 Score = 67.1 bits (162), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 63/173 (36%), Gaps = 22/173 (12%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S      V   + +  P+++     G       +M ++       
Sbjct: 441 RGIEIGHIFKLGTRYSASMGADVLDENGRAVPIIMGCYGIGVSRLLSAVMEQHARLFVNK 500

Query: 542 ---------FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKS----HHLSIETDFRN 588
                    +  N P  L+P    + T+     E AQ +   L++        + TD RN
Sbjct: 501 TPKGEYRYAWGINFPKELAPFDVHLITVNIKDEE-AQALTEKLEANLMGAGYEVLTDDRN 559

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           E +  K  +  +  +PI I  G K A++  + ++   +  T +V + + +  L
Sbjct: 560 ERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVKIKATGDTIEVHVDNLLETL 611


>gi|94968092|ref|YP_590140.1| prolyl-tRNA synthetase [Candidatus Koribacter versatilis Ellin345]
 gi|122986393|sp|Q1IST4|SYP_ACIBL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|94550142|gb|ABF40066.1| prolyl-tRNA synthetase [Candidatus Koribacter versatilis Ellin345]
          Length = 587

 Score =  121 bits (303), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 43/216 (19%), Positives = 84/216 (38%), Gaps = 10/216 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  +        ++E   H+ L R   +  +A    G+  +   G +    +I  +R 
Sbjct: 4   WSKLFIPTLREAPADAEVASHKFLVRAGYIRQLAA---GIYSYLFLGNRSMNKIIGIVRE 60

Query: 286 KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++    +E   P +  + +W+ SG W     NMF +K      +      L   +     
Sbjct: 61  EMDKIGQEYYLPALNPREIWEASGRWAVMGDNMFRLKD-----RKGAELCLGMTHEEIMT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    L+SY++LP    +  + +R+EP     GL+RVR F   D++ F       +   
Sbjct: 116 EIARKELRSYKQLPQIWYQIQTKFRDEPRPR-SGLLRVRQFIMKDSYSFDIDAAGLDISY 174

Query: 406 -KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            K H+    I+   G + ++V   +      GS   
Sbjct: 175 QKHHDAYCRIFDRCGLKYVVVHADSGAMGGSGSQEF 210



 Score = 87.1 bits (214), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 28/164 (17%), Positives = 65/164 (39%), Gaps = 11/164 (6%)

Query: 487 IGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           +G+  + G I  + +       A  ++   ++  P+M    +   +ER +   +E    +
Sbjct: 420 VGKTVEIGHIFKLGYKYTDAMGARVLDKDGKEVMPIMGSYGI--GMERILTASVEQSNDD 477

Query: 546 LPLWL----SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
              WL    +P + +VT          + A+EIA  L++    +  D R+E    K ++ 
Sbjct: 478 NGFWLPAQIAPFEVVVTPTNVSDEKLAKGAEEIAAKLEAAGFDVILDDRDERPGVKFKDA 537

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +  IP+ I  G K      + +    +  +   ++ + +  + 
Sbjct: 538 DLVGIPVRINVGKKFVE-GKVEVIHRSTRESLDATIPEIVEKIA 580


>gi|225856022|ref|YP_002737533.1| prolyl-tRNA synthetase [Streptococcus pneumoniae P1031]
 gi|254782921|sp|C1CIE5|SYP_STRZP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|225724634|gb|ACO20486.1| prolyl-tRNA synthetase [Streptococcus pneumoniae P1031]
          Length = 617

 Score =  121 bits (303), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 45/253 (17%), Positives = 96/253 (37%), Gaps = 16/253 (6%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  ++    GV  +     ++ +   + MR++
Sbjct: 4   SKIPIPTLREMPSDAQVISHALMLRAGYVRQVSA---GVYSYLPLANRVIEKAKNIMRQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +     E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     
Sbjct: 61  FEKIGAVEMLAPALLSAELWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           A+    +KSY++LP+ L +    YR+E     +GL+R R F   DA+ F       +   
Sbjct: 116 AIVRDSVKSYKQLPLNLYQIQPKYRDEKRPR-NGLLRTREFIMKDAYSFHANYDSLDSVY 174

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD-----ALWDDAENIMKGVLDTIKNSSQ 460
             +                  +        G D     A+     ++ + V+     +S 
Sbjct: 175 DEYKAAYERIFTRSGLDFKAIIGDGGAMG-GKDSQEFMAITSARTDLDRWVVLDKSVASF 233

Query: 461 DRINTGVLLGEGA 473
           D I   V     A
Sbjct: 234 DEIPAEVQEEIKA 246



 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 62/173 (35%), Gaps = 22/173 (12%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S      V   + +  P+++     G       +M ++       
Sbjct: 441 RGIEIGHIFKLGTRYSASMGADVLDENGRAVPIIMGCYGIGVSRLLSAVMEQHARLFVNK 500

Query: 542 ---------FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKS----HHLSIETDFRN 588
                    +  N P  L+P    + T+     E AQ +   L++        + TD RN
Sbjct: 501 TPKGEYRYAWGINFPKELAPFDVHLITVNVKDEE-AQALTEKLEASLMGAGYEVLTDDRN 559

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           E +  K  +  +  +PI I  G K A++  + ++   +  T +V   + +  L
Sbjct: 560 ERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVKIKATGDTIEVHADNVLETL 611


>gi|325957052|ref|YP_004292464.1| prolyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
 gi|325333617|gb|ADZ07525.1| prolyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
          Length = 565

 Score =  121 bits (303), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 43/216 (19%), Positives = 88/216 (40%), Gaps = 11/216 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++    H+ + R   +  +    +GV  +   G+++ +   + + ++
Sbjct: 4   SKFFMPTLKEAPSDAVAESHKLMIRGGYIRQV---TAGVYAYLPLGYRVLRKAEAIIEQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +   +  E+  P +L   LWQ+SG +  Y   MF +K      +  R   L P +     
Sbjct: 61  MDRINVPEMIMPHLLPATLWQESGRYKKYGPEMFKLKD-----RHGRESLLGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNEC 404
            +    LKSY+++P+ L +  + +R+E      GL+R R F   D + F  T++Q+  + 
Sbjct: 116 EIIAKNLKSYKQMPMALYQIQTKFRDENRPRF-GLLRGREFVMLDGYSFAATRDQLDEQF 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
               N    I+K  G     V   +       S   
Sbjct: 175 NDQENAYKRIFKRAGVTVHPVIADSGTMGGKNSTEF 210



 Score = 68.7 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 23/159 (14%), Positives = 52/159 (32%), Gaps = 8/159 (5%)

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL- 550
           + G I       ++         + K  PV++     G        + ++       W  
Sbjct: 407 EVGHIFKLGTYYTKTMGADFLDQNGKAQPVIMGSYGIGVTRMLSAAVEQHLTERGVAWPK 466

Query: 551 --SPIQAIVT---TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPI 605
             +P +  +           E A+++          +  D R E    K  +  +   PI
Sbjct: 467 EIAPFEIHIVQMKMNKDDQTELAEKLEKKFSEK-YDVLYDDRKERAGVKFADADLVGAPI 525

Query: 606 IIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            I  G K A++  + ++R       ++S+ +    + +E
Sbjct: 526 RITIGKK-AADGIVEVKRPTDAKATEMSIDELDKFVNQE 563


>gi|322390835|ref|ZP_08064345.1| proline--tRNA ligase [Streptococcus parasanguinis ATCC 903]
 gi|321142505|gb|EFX37973.1| proline--tRNA ligase [Streptococcus parasanguinis ATCC 903]
          Length = 616

 Score =  121 bits (303), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 43/252 (17%), Positives = 93/252 (36%), Gaps = 14/252 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  ++    GV  +     ++ +     MR++
Sbjct: 4   SKMLIPTLREMPSDAQVISHALMLRAGYVRQVSA---GVYSYLPLANRVIEKAKGIMRQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +     E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     
Sbjct: 61  FEKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKN-----REGSDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           A+    +KSY++LP+ L +    YR+E     +GL+R R F   D + F       +   
Sbjct: 116 AIVRDSVKSYKQLPLNLYQIQPKYRDEKRPR-NGLLRTREFIMKDGYSFHANYDSLDVTY 174

Query: 406 KIHNLIISIYKDF-GFEKIMVKLSTRPEKRVGSDALWDDA---ENIMKGVLDTIKNSSQD 461
             +           G +   +           S           ++ + V+     +S D
Sbjct: 175 DEYKAAYERIFTRSGIDYKAIIGDGGAMGGKDSQEFMAVTPARTDLDRWVVLDKSVASFD 234

Query: 462 RINTGVLLGEGA 473
            I   V     A
Sbjct: 235 EIPAEVQEEIKA 246



 Score = 66.3 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/173 (16%), Positives = 59/173 (34%), Gaps = 20/173 (11%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S      V   + +  P+++     G       +M ++       
Sbjct: 441 RGIEIGHIFKLGTRYSASMGADVLDENGRAVPIIMGCYGIGVSRLLSAVMEQHARLFVNK 500

Query: 542 ---------FKGNLPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNE 589
                    +  N P  L+P    +  +     +++     I   L +    +  D RNE
Sbjct: 501 TPKGEYRYAWGINFPKELAPFDVHLIPVNVKDEASLALTDRIEEALVNKGYEVLVDDRNE 560

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
               K  +  +  +PI +  G K A+E  + ++   +  T +V   + +  L+
Sbjct: 561 RAGVKFSDSDLIGLPIRVTVGKK-AAEGIVEVKIKATGDTIEVHADNLLETLS 612


>gi|315038578|ref|YP_004032146.1| prolyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
 gi|312276711|gb|ADQ59351.1| prolyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
          Length = 565

 Score =  121 bits (303), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 43/216 (19%), Positives = 88/216 (40%), Gaps = 11/216 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++    H+ + R   +  +    +GV  +   G+++ +   + + ++
Sbjct: 4   SKFFMPTLKEAPSDAVAESHKLMIRGGYIRQV---TAGVYAYLPLGYRVLRKAEAIIEQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +   +  E+  P +L   LWQ+SG +  Y   MF +K      +  R   L P +     
Sbjct: 61  MDRINVPEMIMPHLLPATLWQESGRYKKYGPEMFKLKD-----RHGRESLLGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNEC 404
            +    LKSY+++P+ L +  + +R+E      GL+R R F   D + F  T++Q+  + 
Sbjct: 116 EIIAKNLKSYKQMPMALYQIQTKFRDENRPRF-GLLRGREFVMLDGYSFAATRDQLDEQF 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
               N    I+K  G     V   +       S   
Sbjct: 175 NDQENAYKRIFKRAGVTVHPVIADSGTMGGKNSTEF 210



 Score = 68.7 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 23/159 (14%), Positives = 52/159 (32%), Gaps = 8/159 (5%)

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL- 550
           + G I       ++         + K  PV++     G        + ++       W  
Sbjct: 407 EVGHIFKLGTYYTKTMGADFLDQNGKAQPVIMGSYGIGVTRMLSAAVEQHLTERGVAWPK 466

Query: 551 --SPIQAIVT---TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPI 605
             +P +  +           E A+++          +  D R E    K  +  +   PI
Sbjct: 467 EIAPFEIHIVQMKMNKDDQTELAEKLEKKFSEK-YDVLYDDRKERAGVKFADADLVGAPI 525

Query: 606 IIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            I  G K A++  + ++R       ++S+ +    + +E
Sbjct: 526 RITIGKK-AADGIVEVKRPTDAKATEMSIDELDKFVNQE 563


>gi|309775936|ref|ZP_07670928.1| proline--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
 gi|308916218|gb|EFP61966.1| proline--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
          Length = 564

 Score =  121 bits (303), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 40/191 (20%), Positives = 83/191 (43%), Gaps = 8/191 (4%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
            I +  SG+      G ++ + +   +R ++     +E+  P ++ + ++++SG  +++ 
Sbjct: 31  MIKKSSSGIYMIMPMGKRVLKKIEEIVREEMDAAGAQELLMPAMIPEEIYEKSGRREAFG 90

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
           +NMFA+K      +  + + L P +             SY++ P  L +  + +R+E   
Sbjct: 91  SNMFALKD-----RYQKNYVLGPTHEELFTMAAMMKGSSYKDFPYNLYQIQTKFRDETRP 145

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
             +GL+RVR F   DA+ F   E   +E   K+ +   +I +       +VK  T     
Sbjct: 146 R-YGLIRVREFIMKDAYSFDIDEAGLHESYKKMFHAYENIMERCDLTYKIVKADTGAMGG 204

Query: 435 VGSDALWDDAE 445
             S+      E
Sbjct: 205 SLSEEFQAITE 215



 Score = 89.1 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 64/154 (41%), Gaps = 10/154 (6%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPI 553
           +           Y + ++ K HPV +    FG +ER +  ++E          P  ++P 
Sbjct: 411 LGTKYAKALGLEYQDVNN-KLHPVEMGCYGFG-LERCMAAIVEQHNDASGIIWPASVAPF 468

Query: 554 QAIVTTITSSAVEYAQ---EIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           +  V  ++S   E  +   E+   LK   + +  D R E    K ++  +  IP  I  G
Sbjct: 469 EVAVVVVSSKDEEQMRIGNELYEALKKEGVDVLLDDRKERPGVKFKDMELIGIPYRITVG 528

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            +   + ++  R   ++ +  ++L + + ++ KE
Sbjct: 529 -RGIKDGNVEFRARTASESSDIALSEVVELVKKE 561


>gi|125625170|ref|YP_001033653.1| prolyl-tRNA synthetase [Lactococcus lactis subsp. cremoris MG1363]
 gi|152112925|sp|A2RNT2|SYP_LACLM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|124493978|emb|CAL98976.1| ProS protein [Lactococcus lactis subsp. cremoris MG1363]
 gi|300071979|gb|ADJ61379.1| prolyl-tRNA synthetase [Lactococcus lactis subsp. cremoris NZ9000]
          Length = 616

 Score =  121 bits (302), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 41/280 (14%), Positives = 102/280 (36%), Gaps = 35/280 (12%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  L R   +  ++    G+  +     ++ + L + MR +
Sbjct: 4   SKMLIPTLREMPSDAQVISHALLMRAGYVRQVSA---GIYAYLPLANRVLEKLKNIMREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
             +    E+  P +L   LW++SG +++Y  +++ +K  D +      F L P +     
Sbjct: 61  FDEIGAVELLAPSLLTADLWRESGRYETYGEDLYKLKNRDSS-----DFILGPTHEETMT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           ++    + SY++LP+ + +  + +R+E     +GL+R R F   D + +   +   +E  
Sbjct: 116 SLVRDEITSYKKLPLNVYQIATKFRDEKRPR-YGLLRGREFLMKDGYSYHADQDSLDETY 174

Query: 406 KIHNLIISIYKDFGFEKI---------MVKLSTRPEKRVGSD----ALW----------- 441
             +        +               M    ++    +  D      W           
Sbjct: 175 LDYKKAYEKIFERAGLNFKPIIADAGAMGGKDSQEFIAITDDRINLEKWLVLSKNITSID 234

Query: 442 DDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
           +  E+++  + + +           ++  EG  Y    E 
Sbjct: 235 EIPESVLSEIQEELGK-WLVAGEDTIVYAEGGDYAANIEM 273



 Score = 69.0 bits (167), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/172 (16%), Positives = 68/172 (39%), Gaps = 20/172 (11%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHS------EKCHPVMIHRAVFGSIERFIGIMIE- 540
           R  + G I  +        NA  ++++         C+ + + R +   +E+F  I +E 
Sbjct: 441 RGIEIGHIFKLGTRYTEAMNANILDANGRSIPMLMGCYGIGVSRLLSAILEQFARIYVEK 500

Query: 541 --------NFKGNLPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNE 589
                   ++  N P  L+P    +  +     +A+E   E+   L+     +  D RNE
Sbjct: 501 TPREEFKFSWSINFPKELAPFDIHLVPVNVKDEAAMELTSELEEKLRGKGYQVLVDDRNE 560

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
               K  +  +  +P+ +  G K A+E  + ++   +    +++  + +  +
Sbjct: 561 RAGVKFADSDLIGLPVRVTIGKK-AAEGIVEVKIRATGEVVEINKDELVNTI 611


>gi|327183775|gb|AEA32222.1| prolyl-tRNA synthetase [Lactobacillus amylovorus GRL 1118]
          Length = 565

 Score =  121 bits (302), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 43/216 (19%), Positives = 88/216 (40%), Gaps = 11/216 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++    H+ + R   +  +    +GV  +   G+++ +   + + ++
Sbjct: 4   SKFFMPTLKEAPSDAVAESHKLMIRGGYIRQV---TAGVYAYLPLGYRVLRKAEAIIEQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +   +  E+  P +L   LWQ+SG +  Y   MF +K      +  R   L P +     
Sbjct: 61  MDRINVPEMIMPHLLPATLWQESGRYKKYGPEMFKLKD-----RHGRESLLGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNEC 404
            +    LKSY+++P+ L +  + +R+E      GL+R R F   D + F  T++Q+  + 
Sbjct: 116 EIIAKNLKSYKQMPMALYQIQTKFRDENRPRF-GLLRGREFVMLDGYSFAATRDQLDEQF 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
               N    I+K  G     V   +       S   
Sbjct: 175 NDQENAYKRIFKRAGVTVHPVIADSGTMGGKNSTEF 210



 Score = 68.7 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 23/159 (14%), Positives = 52/159 (32%), Gaps = 8/159 (5%)

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL- 550
           + G I       ++         + K  PV++     G        + ++       W  
Sbjct: 407 EVGHIFKLGTYYTKTMGADFLDQNGKAQPVIMGSYGIGVTRMLSAAVEQHLTERGVAWPK 466

Query: 551 --SPIQAIVT---TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPI 605
             +P +  +           E A+++          +  D R E    K  +  +   PI
Sbjct: 467 EIAPFEIHIVQMKMNKDDQTELAEKLEKKFSEK-YDVLYDDRKERAGVKFADADLVGAPI 525

Query: 606 IIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            I  G K A++  + ++R       ++S+ +    + +E
Sbjct: 526 RITIGKK-AADGIVEVKRPTDAKATEMSIDELDKFVNQE 563


>gi|332365812|gb|EGJ43569.1| proline--tRNA ligase [Streptococcus sanguinis SK355]
          Length = 616

 Score =  121 bits (302), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 45/250 (18%), Positives = 94/250 (37%), Gaps = 16/250 (6%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  ++    GV  +     ++ +     MR +
Sbjct: 4   SKMLIPTLREMPSDAQVISHALMLRAGYVRQVSA---GVYSYLPLANRVIEKAKKIMREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
                  E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     
Sbjct: 61  FDKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           A+ +  +KSY++LP+ L +    YR+E     +GL+R R F   DA+ F       +   
Sbjct: 116 AIVHDSVKSYKQLPLNLYQIQPKYRDEKRPR-NGLLRTREFIMKDAYSFHANYDSLDVAY 174

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD-----ALWDDAENIMKGVLDTIKNSSQ 460
             +                  +        G D     A+  D  ++ + V+     +S 
Sbjct: 175 DEYKSAYEKIFTRSELDFKAIIGDGGAMG-GKDSQEFMAITPDRTDLNRWVVLDKSVASF 233

Query: 461 DRINTGVLLG 470
           D I   V   
Sbjct: 234 DEIPEDVQEA 243



 Score = 67.5 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 59/173 (34%), Gaps = 20/173 (11%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S      V   + +  P+++     G       +M ++       
Sbjct: 441 RGIEIGHIFKLGTRYSESMNANVLDENGRAVPMIMGCYGIGVSRLLSAVMEQHARLFVNK 500

Query: 542 ---------FKGNLPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNE 589
                    +  N P  L+P    +  +      A+    +I   L S    +  D RNE
Sbjct: 501 TPKGEFRYAWGINFPKELAPFDVHLIPVNVKDEEALALTDQIEANLLSAGYEVLVDDRNE 560

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
               K  +  +  +PI +  G K A+E  + ++   +  T +V   + +  L+
Sbjct: 561 RAGVKFSDSDLIGLPIRVTVGKK-AAEGIVEVKIKATGDTIEVHSDNLLETLS 612


>gi|322379566|ref|ZP_08053903.1| prolyl-tRNA synthetase [Helicobacter suis HS1]
 gi|321147960|gb|EFX42523.1| prolyl-tRNA synthetase [Helicobacter suis HS1]
          Length = 576

 Score =  121 bits (302), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 44/223 (19%), Positives = 83/223 (37%), Gaps = 11/223 (4%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQ 302
           + H+ L +   +  I   GSG+  +   G K+   + + ++ ++     +E     +   
Sbjct: 21  KSHQFLIQAGFIKQI---GSGIYSFLPLGQKVLSKIKNIIKEEMDKHGAQECMFNFITPA 77

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+QS     Y   +   K   +       F L P +    V V    ++SY++LP+ L
Sbjct: 78  SLWEQSKRLHKYGQELLVFKDRKNYP-----FVLGPTHEEVAVEVVKGFVQSYKQLPLHL 132

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKDFGFE 421
            +  + +R+E      GLMR R F   D + F  + + +  E   +  +   I+   G  
Sbjct: 133 YQIHTKFRDEIRPRF-GLMRAREFIMKDGYSFHVSTQDLEREFNAMEQVYSRIFTRLGLN 191

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
              V+  +       S      AE     ++     S    I 
Sbjct: 192 FRAVQADSGAIGGNKSKEFVVLAECGEDSIIACTNCSYAANIE 234



 Score = 69.4 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/162 (17%), Positives = 54/162 (33%), Gaps = 9/162 (5%)

Query: 488 GRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNL 546
            +  + G I Q+         A ++N+  E      +     G       I+ +      
Sbjct: 415 HKSIEVGHIFQLGNTYAKNLGANFLNTEGE-ATFFEMGCYGIGVSRLLPAILEQKSDSKG 473

Query: 547 PLWL---SPIQAIVTTITSSAVEY---AQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
            +W    +P + ++    S   E    AQ +   L    + +  D RN     K+ +   
Sbjct: 474 CVWSLESAPFEVVLVVANSKDTELIALAQTLYQELLEAGVDVLLDDRNLRFGAKMIDFER 533

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
                 +I G KEA    + + +    + Q V  +  I IL 
Sbjct: 534 IGSSYALIIG-KEAKSGHLELIKREGLSKQIVERVQLIDILK 574


>gi|322374996|ref|ZP_08049510.1| proline--tRNA ligase [Streptococcus sp. C300]
 gi|321280496|gb|EFX57535.1| proline--tRNA ligase [Streptococcus sp. C300]
          Length = 617

 Score =  121 bits (302), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 78/192 (40%), Gaps = 10/192 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  ++    GV  +     ++ +   + MR++
Sbjct: 4   SKMLIPTLREMPSDAQVISHALMLRAGYVRQVSA---GVYSYLPLANRVIEKAKNIMRQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
                  E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     
Sbjct: 61  FDKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           A+    +KSY++LP+ L +    YR+E     +GL+R R F   D + F       +   
Sbjct: 116 AIVRDSVKSYKQLPLNLYQIQPKYRDEKRPR-NGLLRTREFIMKDGYSFHANYDSLDVTY 174

Query: 406 KIHNLIISIYKD 417
             +         
Sbjct: 175 DEYKAAYERIFT 186



 Score = 66.3 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/179 (20%), Positives = 69/179 (38%), Gaps = 27/179 (15%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG---- 544
           R  + G I       S      V   + +  P+++     G   R +  ++E        
Sbjct: 441 RGIEIGHIFKLGTRYSASMGADVLDENGRAVPIIMGCYGIGVS-RLLSAVMEQHARLFVN 499

Query: 545 -------------NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKS----HHLSIETDFR 587
                        N P  L+P    + T+     E AQ + + L++        + TD R
Sbjct: 500 KTPKGEYRYAWGVNFPKELAPFDVHLITVNVKDEE-AQALTDKLEASLMGAGYEVLTDDR 558

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV---SLLDAIPILTK 643
           NE +  K  +  +  +PI I  G K A++  + ++   +  T +V   +LL+ + IL+K
Sbjct: 559 NERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVKIKATGDTIEVHADNLLETLEILSK 616


>gi|331267089|ref|YP_004326719.1| prolyl-tRNA synthetase [Streptococcus oralis Uo5]
 gi|326683761|emb|CBZ01379.1| prolyl-tRNA synthetase [Streptococcus oralis Uo5]
          Length = 617

 Score =  121 bits (302), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 78/192 (40%), Gaps = 10/192 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  ++    GV  +     ++ +   + MR++
Sbjct: 4   SKMLIPTLREMPSDAQVISHALMLRAGYVRQVSA---GVYSYLPLANRVIEKAKNIMRQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
                  E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     
Sbjct: 61  FDKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           A+    +KSY++LP+ L +    YR+E     +GL+R R F   D + F       +   
Sbjct: 116 AIVRDSVKSYKQLPLNLYQIQPKYRDEKRPR-NGLLRTREFIMKDGYSFHANYDSLDVTY 174

Query: 406 KIHNLIISIYKD 417
             +         
Sbjct: 175 DEYKAAYERIFT 186



 Score = 66.0 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/179 (20%), Positives = 68/179 (37%), Gaps = 27/179 (15%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG---- 544
           R  + G I       S      V   + +  P+++     G   R +  ++E        
Sbjct: 441 RGIEIGHIFKLGTRYSASMGADVLDENGRAVPIIMGCYGIGVS-RLLSAVMEQHARLFVN 499

Query: 545 -------------NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKS----HHLSIETDFR 587
                        N P  L+P    + T+     E AQ +   L++        + TD R
Sbjct: 500 KTPKGEYRYAWGVNFPKELAPFDVHLITVNVKDEE-AQALTEKLEASLMGAGYEVLTDDR 558

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV---SLLDAIPILTK 643
           NE +  K  +  +  +PI I  G K A++  + ++   +  T +V   +LL+ + IL+K
Sbjct: 559 NERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVKIKATGDTIEVHADNLLETLEILSK 616


>gi|296125160|ref|YP_003632412.1| prolyl-tRNA synthetase [Brachyspira murdochii DSM 12563]
 gi|296016976|gb|ADG70213.1| prolyl-tRNA synthetase [Brachyspira murdochii DSM 12563]
          Length = 578

 Score =  121 bits (302), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 42/240 (17%), Positives = 99/240 (41%), Gaps = 11/240 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++    ++ + R      I+   +G+  +   G ++   + + +R +
Sbjct: 4   SKLFMPTLKEAPSDAIIASNKLMIRAALARKIS---NGLYSYLPLGVRVLSKISNIIREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E   P ++ + L   SG W+ ++  +F +K  +D        A+ P +     
Sbjct: 61  MDAIGSNECIMPILVSKELLTPSGRWERFKKELFRLKDRNDV-----DMAMGPTHEEAFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNEC 404
               + ++SY++LP+ L +  + +R+E      G++R + FT  DA+ F  TKE +    
Sbjct: 116 ITAQNEIQSYKDLPLTLYQIHTKFRDEIRPRF-GVIRSKEFTMKDAYSFHITKECLDKTY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
             +      I+K  G + + VK  +      GS+     +E   + ++   K   +  + 
Sbjct: 175 NDMSRAYTKIFKRMGLDTVSVKADSGAMGGEGSEEFMVLSEVGEETIIFCSKCDYRANVE 234



 Score = 71.4 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 33/158 (20%), Positives = 67/158 (42%), Gaps = 11/158 (6%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPI 553
           +       FN   ++ ++++  P+M    +   + R +  +IE    +     P+ ++P 
Sbjct: 415 LGDKYTQAFNFKVLDENNKEITPIMGCYGI--GVNRALASVIEQNYDDKGIIFPISVAPY 472

Query: 554 QAIVTTITSSAVE---YAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           +AIV  I     E    A+EI N L +  +    D R E +  K+ +  +  IP+ I+ G
Sbjct: 473 EAIVVAIDKEGEESFKKAEEIYNALNALKVETMFDDRKERLGVKLNDCDLIGIPMRIMVG 532

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPIL--TKESL 646
            K      +  +   S+ + +V   + +  +   KE L
Sbjct: 533 KKSLQRGVVEFKLRSSSESIEVKADEIVEYVKAKKEEL 570


>gi|306825925|ref|ZP_07459263.1| proline--tRNA ligase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|304431857|gb|EFM34835.1| proline--tRNA ligase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
          Length = 617

 Score =  121 bits (302), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 78/192 (40%), Gaps = 10/192 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  ++    GV  +     ++ +   + MR++
Sbjct: 4   SKMLIPTLREMPSDAQVISHALMLRAGYVRQVSA---GVYSYLPLANRVIEKAKNIMRQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
                  E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     
Sbjct: 61  FDKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           A+    +KSY++LP+ L +    YR+E     +GL+R R F   D + F       +   
Sbjct: 116 AIVRDSVKSYKQLPLNLYQIQPKYRDEKRPR-NGLLRTREFIMKDGYSFHANYNSLDVTY 174

Query: 406 KIHNLIISIYKD 417
             +         
Sbjct: 175 DEYKAAYERIFT 186



 Score = 67.5 bits (163), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 36/178 (20%), Positives = 66/178 (37%), Gaps = 25/178 (14%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG---- 544
           R  + G I       S      V   + +  P+++     G   R +  +IE        
Sbjct: 441 RGIEIGHIFKLGTRYSASMGADVLDENGRAVPIIMGCYGIGVS-RLLSAVIEQHARLFVN 499

Query: 545 -------------NLPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRN 588
                        N P  L+P    + T+      A    +++   L      + TD RN
Sbjct: 500 KTPKGEYRYAWGVNFPKELAPFDVHLITVNVKDEEAQALTEKLEASLMEAGYEVLTDDRN 559

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV---SLLDAIPILTK 643
           E +  K  +  +  +PI I  G K A++  + ++   +  T +V   +LL+ + IL+K
Sbjct: 560 ERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVKIKATGDTIEVHADNLLETLEILSK 616


>gi|293364306|ref|ZP_06611032.1| proline--tRNA ligase [Streptococcus oralis ATCC 35037]
 gi|307702728|ref|ZP_07639680.1| prolyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
 gi|291317152|gb|EFE57579.1| proline--tRNA ligase [Streptococcus oralis ATCC 35037]
 gi|307623844|gb|EFO02829.1| prolyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
          Length = 617

 Score =  121 bits (302), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 78/192 (40%), Gaps = 10/192 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  ++    GV  +     ++ +   + MR++
Sbjct: 4   SKMLIPTLREMPSDAQVISHALMLRAGYVRQVSA---GVYSYLPLANRVIEKAKNIMRQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
                  E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     
Sbjct: 61  FDKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           A+    +KSY++LP+ L +    YR+E     +GL+R R F   D + F       +   
Sbjct: 116 AIVRDSVKSYKQLPLNLYQIQPKYRDEKRPR-NGLLRTREFIMKDGYSFHANYDSLDVTY 174

Query: 406 KIHNLIISIYKD 417
             +         
Sbjct: 175 DEYKAAYERIFT 186



 Score = 67.9 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 34/174 (19%), Positives = 63/174 (36%), Gaps = 24/174 (13%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG---- 544
           R  + G I       S      V   + +  P+++     G   R +  ++E        
Sbjct: 441 RGIEIGHIFKLGTRYSASMGADVLDENGRAVPIIMGCYGIGVS-RLLSAVMEQHARLFVN 499

Query: 545 -------------NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKS----HHLSIETDFR 587
                        N P  L+P    + T+     E AQ +   L++        + TD R
Sbjct: 500 KTPKGEYRYAWGVNFPKELAPFDVHLITVNVKDEE-AQTLTEKLEASLMGAGYEVLTDDR 558

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           NE I  K  +  +  +PI I  G K A++  + ++   +  T +V + + +  L
Sbjct: 559 NERIGVKFSDSDLIGLPIRITVGKK-AADGIVEVKIKATGDTIEVHVDNLLETL 611


>gi|116513081|ref|YP_811988.1| prolyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11]
 gi|123025108|sp|Q02VZ7|SYP_LACLS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|116108735|gb|ABJ73875.1| Prolyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11]
          Length = 616

 Score =  121 bits (302), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 41/280 (14%), Positives = 102/280 (36%), Gaps = 35/280 (12%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  L R   +  ++    G+  +     ++ + L + MR +
Sbjct: 4   SKMLIPTLREMPSDAQVISHALLMRAGYVRQVSA---GIYAYLPLANRVLEKLKNIMREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
             +    E+  P +L   LW++SG +++Y  +++ +K  D +      F L P +     
Sbjct: 61  FDEIGAVELLAPSLLTADLWRESGRYETYGEDLYKLKNRDSS-----DFILGPTHEETMT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           ++    + SY++LP+ + +  + +R+E     +GL+R R F   D + +   +   +E  
Sbjct: 116 SLVRDEITSYKKLPLNVYQIATKFRDEKRPR-YGLLRGREFLMKDGYSYHADQDSLDETY 174

Query: 406 KIHNLIISIYKDFGFEKI---------MVKLSTRPEKRVGSD----ALW----------- 441
             +        +               M    ++    +  D      W           
Sbjct: 175 LDYKKSYEKIFERAGLNFKPIIADAGAMGGKDSQEFIAITDDRINLEKWLVLSKNITSID 234

Query: 442 DDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
           +  E+++  + + +           ++  EG  Y    E 
Sbjct: 235 EIPESVLSEIQEELGK-WLVAGEDTIVYAEGGDYAANIEM 273



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/172 (16%), Positives = 68/172 (39%), Gaps = 20/172 (11%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHS------EKCHPVMIHRAVFGSIERFIGIMIE- 540
           R  + G I  +        NA  ++++         C+ + + R +   +E+F  I +E 
Sbjct: 441 RGIEIGHIFKLGTRYTEAMNANILDANGRSIPMLMGCYGIGVSRLLSAILEQFARIYVEK 500

Query: 541 --------NFKGNLPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNE 589
                   ++  N P  L+P    +  +     +A+E   E+   L+     +  D RNE
Sbjct: 501 TPREEFKFSWSINFPKELAPFDIHLVPVNVKDEAAMELTSELEEKLRGKGYQVLVDDRNE 560

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
               K  +  +  +P+ +  G K A+E  + ++   +    +++  + +  +
Sbjct: 561 RAGVKFADSDLIGLPVRVTIGKK-AAEGIVEVKIRATGEVVEINKDELVNTI 611


>gi|315612430|ref|ZP_07887343.1| proline--tRNA ligase [Streptococcus sanguinis ATCC 49296]
 gi|315315411|gb|EFU63450.1| proline--tRNA ligase [Streptococcus sanguinis ATCC 49296]
          Length = 617

 Score =  121 bits (302), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 78/192 (40%), Gaps = 10/192 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  ++    GV  +     ++ +   + MR++
Sbjct: 4   SKMLIPTLREMPSDAQVISHALMLRAGYVRQVSA---GVYSYLPLANRVIEKAKNIMRQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
                  E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     
Sbjct: 61  FDKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           A+    +KSY++LP+ L +    YR+E     +GL+R R F   D + F       +   
Sbjct: 116 AIVRDSVKSYKQLPLNLYQIQPKYRDEKRPR-NGLLRTREFIMKDGYSFHANYDSLDVTY 174

Query: 406 KIHNLIISIYKD 417
             +         
Sbjct: 175 DEYKAAYERIFT 186



 Score = 66.0 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/179 (20%), Positives = 68/179 (37%), Gaps = 27/179 (15%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG---- 544
           R  + G I       S      V   + +  P+++     G   R +  ++E        
Sbjct: 441 RGIEIGHIFKLGTRYSASMGADVLDENGRAVPIIMGCYGIGVS-RLLSAVMEQHARLFVN 499

Query: 545 -------------NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKS----HHLSIETDFR 587
                        N P  L+P    + T+     E AQ +   L++        + TD R
Sbjct: 500 KTPKGEYRYAWGVNFPKELAPFDVHLITVNVKDEE-AQALTEKLEASLMGAGYEVLTDDR 558

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV---SLLDAIPILTK 643
           NE +  K  +  +  +PI I  G K A++  + ++   +  T +V   +LL+ + IL+K
Sbjct: 559 NERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVKIKATGDTIEVHADNLLETLEILSK 616


>gi|27904721|ref|NP_777847.1| prolyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
 gi|46396631|sp|Q89AN7|SYP_BUCBP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|27904118|gb|AAO26952.1| prolyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
          Length = 574

 Score =  121 bits (302), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 43/215 (20%), Positives = 85/215 (39%), Gaps = 11/215 (5%)

Query: 228 QQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI 287
           +   +        S+   H  + R      I ++ SG   W   G +I + +I  ++ ++
Sbjct: 5   KYLFSTLKETPHNSDCISHALMLRAG---IIRQNTSGTYIWLPTGLRILKKVIRIIKNEM 61

Query: 288 KD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA 346
           K     EI  P +  ++LW  S    +Y   +F V     T +  + F L P +      
Sbjct: 62  KQCGAMEIAMPFLQKKNLWDLSKRVITYGQELFQV-----TDRTNKKFILGPTHEEMITY 116

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
              + L+SY++LP+ L +  + +R+E      G++R + F   DA+ F        +   
Sbjct: 117 FIKNELQSYKQLPLILYQIQTKFRDEIRPRF-GIIRTKEFMMKDAYSFHINMLSLEKTYN 175

Query: 407 -IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            ++   I I+K    +   V+  +     + S   
Sbjct: 176 LMYQTYIKIFKKMKLKFYAVEADSGLMGGLKSHEF 210



 Score = 52.9 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/170 (14%), Positives = 55/170 (32%), Gaps = 9/170 (5%)

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN 545
           +          +            V   ++      +    +G  I R I  +IE     
Sbjct: 405 LKMQKSIEIAHIFQLGKKYSKIMNVKIQNKIGKKDTLIMGCYGIGITRIIAAIIEQNNDK 464

Query: 546 ----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
                P  ++P    +  +    ++   + +++I N  K +++    D R + ++  + E
Sbjct: 465 NGIIWPDSIAPFTIAIIPVCFHKSTLVKQQSEKIYNFCKKNNIDALLDDRKQNLSITLSE 524

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLP 647
             +  IP  II  +K      +  R       + ++      I+   SL 
Sbjct: 525 IELIGIPYSIIISEKLLKNDMVEYRERHKNVKKIINKNHVFKIILNNSLK 574


>gi|291515305|emb|CBK64515.1| Uridine kinase [Alistipes shahii WAL 8301]
          Length = 556

 Score =  120 bits (301), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 47/210 (22%), Positives = 89/210 (42%), Gaps = 5/210 (2%)

Query: 1   MPSDIKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGS 58
           M   IK+   +G      P+     +VAE ++  L    +A  +N ++ +LS  +    +
Sbjct: 1   MNDTIKVICENGFGELEVPMGTPLLEVAERLTPGL-HPFLAAFVNNRIKELSYKIYAPVT 59

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSD 117
           I  +       + V + +   ++ +AV+ ++P   + I   +   GFY + D    F+ D
Sbjct: 60  IRFVDITSFAGIRVYQRTAWFLLQKAVKDLYPGQTLHIRHSMGQSGFYCEIDGIDEFTPD 119

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           E AQ+  +M+E+  R+ P  +Q +   + R  +  +    K+ +L++ P      LY   
Sbjct: 120 EAAQLRDRMRELSVRNLPITRQRMLTTEVRARYAEEGFTDKIALLDTRPRL-YSQLYTLD 178

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAY 207
           +      G    STG V  F       G Y
Sbjct: 179 DTAGYFYGSLAPSTGYVTLFDIEPYYNGFY 208


>gi|307720827|ref|YP_003891967.1| prolyl-tRNA synthetase [Sulfurimonas autotrophica DSM 16294]
 gi|306978920|gb|ADN08955.1| prolyl-tRNA synthetase [Sulfurimonas autotrophica DSM 16294]
          Length = 568

 Score =  120 bits (301), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 44/240 (18%), Positives = 89/240 (37%), Gaps = 11/240 (4%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++    H  L+R      I +  +G+  +     ++ + + + +  +
Sbjct: 4   SKAFIPTTKEAPSDATLPSHIFLSRAG---FITQVAAGLYNYLPLAKRVIKKIENIINEE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E+    V    LWQ+SG  + +   +       + +     F L P +    V
Sbjct: 61  MTKIGAQEVELSFVTPAELWQESGRIEKFGKELLRFHDRKNNL-----FVLGPTHEEMMV 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNEC 404
            V  + + SY+ LP+ L +  + +R+E      GLMR R F   D + F  T E +  E 
Sbjct: 116 DVVRNRVTSYKNLPLNLYQIKTKFRDEARPRF-GLMRGREFIMKDGYSFHATTEDLDREF 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
             +      I    G +  +V+  +      GS  L   A++    +    K      I 
Sbjct: 175 DTVEEAYKKILTRLGLDFRIVEADSGAIGGSGSKELMVLADSGEDTIAVCSKCEYGANIE 234



 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 22/153 (14%), Positives = 54/153 (35%), Gaps = 10/153 (6%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNLPLWLSPIQAI 556
           +         A +++ +  K  P ++     G   R +  +IE +   N  +W       
Sbjct: 417 LGTTYSEALKAEFLDENG-KAQPFIMGTYGMGVS-RMVAAVIEQHHDDNGCIWTKATAPY 474

Query: 557 VTTI------TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           +  I        + V+  +++   L+   + +  D R E   +K+++  +   P  I+ G
Sbjct: 475 MVNIMISNIKDEAQVQAGEKLYKQLQDADVEVMLDDRKERFGFKMKDAELIGFPYTIVIG 534

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            KE     + I    +     +   +    + +
Sbjct: 535 -KELVNGHMQIFERVTKEKTDIKSEEIFNKIME 566


>gi|288926843|ref|ZP_06420750.1| phosphoribulokinase family protein [Prevotella buccae D17]
 gi|315607075|ref|ZP_07882079.1| phosphoribulokinase [Prevotella buccae ATCC 33574]
 gi|288336368|gb|EFC74747.1| phosphoribulokinase family protein [Prevotella buccae D17]
 gi|315251129|gb|EFU31114.1| phosphoribulokinase [Prevotella buccae ATCC 33574]
          Length = 553

 Score =  120 bits (301), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 46/244 (18%), Positives = 95/244 (38%), Gaps = 3/244 (1%)

Query: 1   MPSDIKLTFPDGSIKN-FPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-S 58
           M   I++   +        + +T SDV    +  +    ++  +N KV  +   +     
Sbjct: 1   MKQVIQIRCKNNKKTQKIAIGSTLSDVFREFNLKMDYGPISAKVNNKVEGMHYRLYHSKD 60

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           +E        +      +   ++++AV  I+   +V I   + +G++ + D        +
Sbjct: 61  VEFQDMYTASASRNYTRTLFFVLSKAVHDIYRHSEVVIDIPVSNGYFVNLDIGHAVGLQD 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           +  I ++MQEII    P  +  +  E+A  +F  K    KV++LESI      T Y+  +
Sbjct: 121 VDNIRRRMQEIIDAGIPIRRFEVPTEEAIRMFREKGADSKVKLLESI-GSLYTTYYQIDD 179

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D   G  + +T Q+  F       G   R  S +        T  +   E+ +  +  
Sbjct: 180 YLDYYYGSLLTNTSQLYLFGLEKYYDGMLLRIPSLKNPGVLGEMTRQDKMFEIFKEHHRW 239

Query: 239 EESE 242
           ++  
Sbjct: 240 QDIM 243


>gi|270292053|ref|ZP_06198268.1| proline--tRNA ligase [Streptococcus sp. M143]
 gi|270279581|gb|EFA25423.1| proline--tRNA ligase [Streptococcus sp. M143]
          Length = 617

 Score =  120 bits (301), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 78/192 (40%), Gaps = 10/192 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  ++    GV  +     ++ +   + MR++
Sbjct: 4   SKMLIPTLREMPSDAQVISHALMLRAGYVRQVSA---GVYSYLPLANRVIEKAKNIMRQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
                  E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     
Sbjct: 61  FDKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           A+    +KSY++LP+ L +    YR+E     +GL+R R F   D + F       +   
Sbjct: 116 AIVRDSVKSYKQLPLNLYQIQPKYRDEKRPR-NGLLRTREFIMKDGYSFHANYDSLDLTY 174

Query: 406 KIHNLIISIYKD 417
             +         
Sbjct: 175 DEYKAAYERIFT 186



 Score = 66.0 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/178 (19%), Positives = 66/178 (37%), Gaps = 25/178 (14%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG---- 544
           R  + G I       S      V   + +  P+++     G   R +  ++E        
Sbjct: 441 RGIEIGHIFKLGTRYSASMGADVLDENGRAVPIIMGCYGIGVS-RLLSAVMEQHARLFVN 499

Query: 545 -------------NLPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRN 588
                        N P  L+P    + T+      A    +++   L      + TD RN
Sbjct: 500 KTPKGEYRYAWGVNFPKELAPFDVHLITVNVKDEEAQALTEKLEANLMEAGYEVLTDDRN 559

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV---SLLDAIPILTK 643
           E +  K  +  +  +PI I  G K A++  + ++   +  T +V   +LL+ + IL+K
Sbjct: 560 ERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVKIKATGDTIEVHADNLLETLEILSK 616


>gi|26449536|dbj|BAC41894.1| unknown protein [Arabidopsis thaliana]
          Length = 186

 Score =  120 bits (301), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 42/145 (28%), Positives = 72/145 (49%), Gaps = 8/145 (5%)

Query: 3   SDIKLTF-PDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
             IK+T  PDG  K       +  D+A  IS+ LAK A+  ++N  + D++ P+  + S+
Sbjct: 41  DPIKITLLPDGIEKEGRRWETSPMDIAVQISKGLAKSALVSSVNHVLWDMNRPLEGDCSL 100

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP--IIEDGFYYD--FDKEQPFS 115
           EI   +  +      HS AHI+ +A++  +   ++ IGP    ++GFYYD  +  E   +
Sbjct: 101 EIFGFDSDQGRNTFWHSSAHILGQALEQEY-GCKLCIGPCEPRDEGFYYDSLYYGELGLN 159

Query: 116 SDELAQIEKKMQEIIARDSPFLKQY 140
            +    IE  +  I   D  F+ +Y
Sbjct: 160 DNHFPNIEASVAYISFADIFFVLRY 184


>gi|58700029|ref|ZP_00374583.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|58533457|gb|EAL57902.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
          Length = 121

 Score =  120 bits (301), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 58/116 (50%), Positives = 81/116 (69%)

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           + +FN   +SYR+LP+R+AEFG+ +RNE SGSLHGLMRVRGFTQDDAH+FC +EQ+ +E 
Sbjct: 1   MQIFNSHTRSYRDLPIRMAEFGTCHRNESSGSLHGLMRVRGFTQDDAHIFCMEEQVNSET 60

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQ 460
           +K  +L+  +Y + GF +I VK S RP+ R G D +WD AE  +   +     S +
Sbjct: 61  IKFCDLLKEVYSELGFNEISVKFSDRPDVRAGDDEVWDRAEKALLEAVKEAGLSYE 116


>gi|320547753|ref|ZP_08042037.1| proline--tRNA ligase [Streptococcus equinus ATCC 9812]
 gi|320447513|gb|EFW88272.1| proline--tRNA ligase [Streptococcus equinus ATCC 9812]
          Length = 618

 Score =  120 bits (301), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 49/250 (19%), Positives = 99/250 (39%), Gaps = 16/250 (6%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           TQ  +        +++   H  + R   +  ++    G+  +     +  +     MR +
Sbjct: 4   TQMLIPTLREMPSDAQVISHALMVRAGYVRQVSA---GIYAYLPLANRTIEKFKKIMREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +     E+  P +L+  LW++SG +++Y  +++ +K      +D   F L P +     
Sbjct: 61  FEKIGAVEMLAPALLNADLWRESGRYETYGEDLYKLKN-----RDKSDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           ++    +KSY++LP+ L +  S YR+E     +GL+R R F   D + F    +  +E  
Sbjct: 116 SLIRDAVKSYKQLPLNLYQIQSKYRDEKRPR-NGLLRTREFIMKDGYSFHADYEGLDETY 174

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD-----ALWDDAENIMKGVLDTIKNSSQ 460
           + +                  +        G D     A+  D  ++ + V+     +S 
Sbjct: 175 EEYRKAYEAIFTRAGLDFKGIIGDGGAMG-GKDSQEFMAITPDRTDLDRWVVLDKSIASF 233

Query: 461 DRINTGVLLG 470
           D I   VL G
Sbjct: 234 DEIPEDVLEG 243



 Score = 71.0 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 35/180 (19%), Positives = 68/180 (37%), Gaps = 27/180 (15%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------ 541
           R  + G I  +         A  ++ +  +  P+++     G   R +  +IE       
Sbjct: 441 RGIEIGHIFKLGTRYSESMGATILDQNG-RAVPIIMGCYGIGVS-RILSAVIEQHARLFV 498

Query: 542 -----------FKGNLPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFR 587
                      +  N P  L+P    V T+      A     ++   L      +  D R
Sbjct: 499 SKTPKGAYRFAWGINFPKELAPFDVHVITVNVKDEEAQALTAKVEAELVEKGYEVLVDDR 558

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV---SLLDAIPILTKE 644
           NE +  K  +  +  +PI +  G K A++  + ++   +  T +V   +L++ + ILTKE
Sbjct: 559 NERVGSKFSDSDLIGLPIRVTVGKK-AADGIVEVKIKATGDTIEVNAENLIETLEILTKE 617


>gi|319945653|ref|ZP_08019905.1| proline--tRNA ligase [Streptococcus australis ATCC 700641]
 gi|319748252|gb|EFW00494.1| proline--tRNA ligase [Streptococcus australis ATCC 700641]
          Length = 616

 Score =  120 bits (301), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 77/192 (40%), Gaps = 10/192 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  ++    GV  +     ++ +     MR++
Sbjct: 4   SKMLIPTLREMPSDAQVISHALMLRAGYVRQVSA---GVYSYLPLANRVIEKAKKIMRQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
                  E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     
Sbjct: 61  FDKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           A+    +KSY++LP+ L +    YR+E     +GL+R R F   D + F       +   
Sbjct: 116 AIVRDSVKSYKQLPLNLYQIQPKYRDEKRPR-NGLLRTREFIMKDGYSFHANYDSLDVTY 174

Query: 406 KIHNLIISIYKD 417
             +         
Sbjct: 175 DEYKAAYERIFT 186



 Score = 71.0 bits (172), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 61/173 (35%), Gaps = 20/173 (11%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S      V   + +  P+++     G       +M ++       
Sbjct: 441 RGIEIGHIFKLGTRYSASMGADVLDENGRAVPIIMGCYGIGVSRLLSAVMEQHARLFVNK 500

Query: 542 ---------FKGNLPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNE 589
                    +  N P  L+P    +  +     +++E   +I + L      +  D RNE
Sbjct: 501 TPKGEYRYAWGINFPKELAPFDVHLIPVNVKDEASLELTSKIEDQLVKAGYEVLVDDRNE 560

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
               K  +  +  +PI I  G K A++  + ++   S  T +V   + +  L+
Sbjct: 561 RAGVKFSDSDLIGLPIRITVGKK-AADGVVEVKIKASGDTIEVHADNLLETLS 612


>gi|256847045|ref|ZP_05552491.1| prolyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
 gi|256715709|gb|EEU30684.1| prolyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
          Length = 577

 Score =  120 bits (301), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 42/213 (19%), Positives = 91/213 (42%), Gaps = 12/213 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++E   H+ + R   ++ ++   SGV  +    +++ + + + +R +
Sbjct: 4   SKILIPTKKEAPSDAEALSHKMMIRAGYIYQVS---SGVWSYLPLAYRVIRKVKAIIREE 60

Query: 287 IK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++  D  E+ TP +L   LWQQ+G +++Y   +F  K  +D     R   L P +     
Sbjct: 61  MEKADAFEMETPSMLPADLWQQTGRYEAYGDTLFKFKDRND-----REHILGPTDEEVMT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    +KSY++LP+ + +    +R+EP      L R + F+  D + F   +   +E  
Sbjct: 116 EILRDSIKSYKKLPLTVYQITDKFRDEPRPRFGVL-RGKEFSMLDGYSFAADQAGLDEAY 174

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD 438
                  +    F    +  K+       +G D
Sbjct: 175 N--QQAQAYRNIFDRIGLDYKIILADSGTIGGD 205



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/189 (20%), Positives = 72/189 (38%), Gaps = 18/189 (9%)

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
            V  GE A  G   ++     IG  ++ GT         +  A  ++ +  +   +++  
Sbjct: 390 TVQEGEIAPDGNPIKFTNGIEIGHIFKLGT-----GYSEKLGAQVLDQNG-RLVDMIMGC 443

Query: 526 AVFGSIERFIGIMIENFKGNLPL-WL---SPIQAIVTTITS---SAVEYAQEIANLLKSH 578
              G   R +  + E       L W    +P    V  + +     ++ A EI+  L+  
Sbjct: 444 YGIGVT-RLLSAVAEQNADEYGLVWPDSIAPFDVHVIPVNAKKADQMKMANEISEQLEKA 502

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA- 637
            L +  D R E    K  +  +  IP+ +  G K ASE  + I+   +  T +V   +  
Sbjct: 503 GLEVLVDDRKERAGVKFADSDLIGIPLRVTVGKK-ASEGIVEIKIRKTGETVEVKTEEVA 561

Query: 638 --IPILTKE 644
             + IL K+
Sbjct: 562 NTVQILLKQ 570


>gi|197301811|ref|ZP_03166881.1| hypothetical protein RUMLAC_00537 [Ruminococcus lactaris ATCC
           29176]
 gi|197299251|gb|EDY33781.1| hypothetical protein RUMLAC_00537 [Ruminococcus lactaris ATCC
           29176]
          Length = 558

 Score =  120 bits (301), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 54/254 (21%), Positives = 96/254 (37%), Gaps = 12/254 (4%)

Query: 1   MPSDI-KLTFPDGSI-KNFPVHATGSDVAESISRSLAKKAVAVAING-KVCDLSDPVR-E 56
           M   + ++T   G+I K +    T S++A         + V   ++G  + +L   V  +
Sbjct: 1   MEESVCRVTL--GNITKEYKKGTTYSEIAREFQPDYEHQIVLAMVDGYHLRELRKTVEKD 58

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQS-----IWPEVQVAIGPIIEDGFYYDFDKE 111
             I  +T  DP      R S   +  +A        +   V++ +   +  GFY   DK+
Sbjct: 59  CEIHFLTTADPIGNDTYRRSLCFLFIKAFHDISGHDLKHRVRIRVHFTMGPGFYCTVDKK 118

Query: 112 QPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENV 171
           +      LA++E +M+E+     P  K+ +   +A ELF       K E L +      V
Sbjct: 119 EKPDETFLAKVEARMRELAKMAIPIQKRCIDTGEAVELFHKYGMYDK-ERLFAYRRVSKV 177

Query: 172 TLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQEL 231
            LY   E+ D   G  V  TG +K F       G   +  S     +      +N   ++
Sbjct: 178 NLYSINEFEDYFYGYMVPDTGYLKYFALYPYEDGVVIQMPSKEDPETVPPFEPYNKLFQV 237

Query: 232 TQYLYFLEESEKRD 245
                   + ++ D
Sbjct: 238 RHEAIRWGDLQEID 251


>gi|312867906|ref|ZP_07728110.1| proline--tRNA ligase [Streptococcus parasanguinis F0405]
 gi|311096310|gb|EFQ54550.1| proline--tRNA ligase [Streptococcus parasanguinis F0405]
          Length = 616

 Score =  120 bits (301), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 36/192 (18%), Positives = 78/192 (40%), Gaps = 10/192 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  ++    GV  +     ++ +     MR++
Sbjct: 4   SKMLIPTLREMPSDAQVISHALMLRAGYVRQVSA---GVYSYLPLANRVIEKAKGIMRQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +     E+  P +L   LW++SG +D+Y  +++ +K      ++   F L P +     
Sbjct: 61  FEKIGAVEMLAPALLSADLWRESGRYDTYGEDLYKLKN-----REGSDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           A+    +KSY++LP+ L +    YR+E     +GL+R R F   D + F       +   
Sbjct: 116 AIVRDSVKSYKQLPLNLYQIQPKYRDEKRPR-NGLLRTREFIMKDGYSFHANYDSLDVTY 174

Query: 406 KIHNLIISIYKD 417
             +         
Sbjct: 175 DEYKAAYERIFT 186



 Score = 66.3 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/173 (16%), Positives = 59/173 (34%), Gaps = 20/173 (11%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S      V   + +  P+++     G       +M ++       
Sbjct: 441 RGIEIGHIFKLGTRYSASMGADVLDENGRAVPIIMGCYGIGVSRLLSAVMEQHARLFVNK 500

Query: 542 ---------FKGNLPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNE 589
                    +  N P  L+P    +  +     +++     I   L +    +  D RNE
Sbjct: 501 TPKGEYRYAWGINFPKELAPFDVHLIPVNVKDEASLALTNRIEEALVNKGYEVLVDDRNE 560

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
               K  +  +  +PI +  G K A+E  + ++   +  T +V   + +  L+
Sbjct: 561 RAGVKFSDSDLIGLPIRVTVGKK-AAEGIVEVKIKATGDTIEVHADNLLETLS 612


>gi|72383677|ref|YP_293032.1| prolyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A]
 gi|114152229|sp|Q46GR7|SYP_PROMT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|72003527|gb|AAZ59329.1| prolyl-tRNA synthetase, bacterial [Prochlorococcus marinus str.
           NATL2A]
          Length = 596

 Score =  120 bits (300), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 56/303 (18%), Positives = 112/303 (36%), Gaps = 11/303 (3%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  L        E++   H+ L R   +  +     G+  +    WK+ + + S +  +
Sbjct: 4   SRLMLNTLRDVPAEADIISHQLLVRGGYVKRL---TGGIYAYMPLLWKVLKKITSIVEEE 60

Query: 287 I-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      +   PQ+    +W++SG W SY      +    D  +  +   L P +     
Sbjct: 61  LSTKGCLQTLLPQLQPSEIWERSGRWKSYTKGEGIMFSLKD--RQGKELGLGPTHEEVIT 118

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            + +  + SY++LP+ + +  + +R+E      GLMR R F   DA+ F   E       
Sbjct: 119 QIISQTIHSYKQLPINIFQIQTKFRDEIRPRF-GLMRSREFIMKDAYSFHANENDLQSTY 177

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
             + N   +I+   G + + V   +       S      AE+    +L +  +       
Sbjct: 178 SDMRNAYENIFTKCGLDFVCVDADSGAIGGAASQEFMVTAESGEDLILISSDSKYGANQE 237

Query: 465 TGV-LLGEGAFYGPKFEYILKDAIGR--DWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
             V ++ EG    P    I+K    +  D  C       +   +  A+       K +PV
Sbjct: 238 KAVSIIEEGKLLEPNKPSIIKTPNQKTIDELCNYNDFHPSQIVKVLAYLATCDDNKKYPV 297

Query: 522 MIH 524
           ++ 
Sbjct: 298 LVS 300



 Score = 75.2 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 57/163 (34%), Gaps = 9/163 (5%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I Q+        NA + N    + H  M      G        + +N      
Sbjct: 430 RGIEIGHIFQLGTKYSKSLNATFTNEKGVEDHFWM-GCYGIGISRLAQAAVEQNHDDLGI 488

Query: 548 LWLSPIQAIVTTITS------SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W + I      I             A++I   L    + +  D R+E    K ++  + 
Sbjct: 489 IWPTSIAPFTVIIIIANIKNNDQKCLAEDIYQKLIQDRVDVLLDDRDERAGIKFKDADLI 548

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            IP  I+ G +EAS   + +    +  T+ + L      L++E
Sbjct: 549 GIPWRIVAG-REASSGLVELHNRKTKITELLDLNSVFKKLSEE 590


>gi|315222088|ref|ZP_07863998.1| prolyl-tRNA synthetase [Streptococcus anginosus F0211]
 gi|315188838|gb|EFU22543.1| prolyl-tRNA synthetase [Streptococcus anginosus F0211]
          Length = 619

 Score =  120 bits (300), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 36/188 (19%), Positives = 78/188 (41%), Gaps = 10/188 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  I+    GV  +     ++ +     MR +
Sbjct: 4   SKMLIPTLREMPSDAQVISHALMLRAGYVRQISA---GVYSYLPLANRVIEKAKKIMREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +     E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     
Sbjct: 61  FEKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKN-----REGSDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           A+    +KSY++LP+ L +  + YR+E     +GL+R R F   D + F       +   
Sbjct: 116 AIVRDSVKSYKQLPLNLYQIQAKYRDEKRPR-NGLLRTREFIMKDGYSFHANYDSLDVTY 174

Query: 406 KIHNLIIS 413
             +     
Sbjct: 175 DEYKTAYE 182



 Score = 67.5 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 64/174 (36%), Gaps = 22/174 (12%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------ 541
           R  + G I  +        NA  ++ +  +  PV++     G       +M ++      
Sbjct: 441 RGIEIGHIFKLGTRYSESMNATVLDENG-RAVPVVMGCYGIGVSRLLSAVMEQHARLFVN 499

Query: 542 ----------FKGNLPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRN 588
                     +  N P  L+P    +  +      A+   +++   L      + TD RN
Sbjct: 500 KTPKGDYRYAWGINFPKELAPFDVHLIPVNVKDEEALVLTEQLEAELVKAGYEVLTDDRN 559

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           E    K  +  +  +PI +  G K A++R + ++   +  T +V + + +  L 
Sbjct: 560 ERAGVKFSDSDLIGLPIRVTVGKK-AADRIVEVKIKATGDTIEVHVDNLLETLA 612


>gi|309799607|ref|ZP_07693832.1| prolyl-tRNA synthetase [Streptococcus infantis SK1302]
 gi|308116758|gb|EFO54209.1| prolyl-tRNA synthetase [Streptococcus infantis SK1302]
          Length = 617

 Score =  120 bits (300), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 77/192 (40%), Gaps = 10/192 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  ++    GV  +     ++ +     MR++
Sbjct: 4   SKMLIPTLREMPSDAQVISHALMLRAGYVRQVSA---GVYSYLPLANRVIEKAKKIMRQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
                  E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     
Sbjct: 61  FDKMGAVEMLAPALLSADLWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           A+    +KSY++LP+ L +    YR+E     +GL+R R F   D + F       +   
Sbjct: 116 AIVRDSVKSYKQLPLNLYQIQPKYRDEKRPR-NGLLRTREFIMKDGYSFHANYDSLDVTY 174

Query: 406 KIHNLIISIYKD 417
             +         
Sbjct: 175 DEYKAAYERIFT 186



 Score = 66.3 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/172 (16%), Positives = 60/172 (34%), Gaps = 20/172 (11%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S      V   + +  P+++     G       +M ++       
Sbjct: 441 RGIEIGHIFKLGTRYSASMGADVLDENGRAVPIIMGCYGIGVSRLLSAVMEQHARLFVNK 500

Query: 542 ---------FKGNLPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNE 589
                    +  N P  L+P    +  +     +++     I   L +    + TD RNE
Sbjct: 501 TPKGEYRYAWGINFPKELAPFDVHLIPVNVKDEASLTLTNRIEEALVNKGYEVLTDDRNE 560

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            +  K  +  +  +PI I  G K A++  + ++   +  T +V +   +  L
Sbjct: 561 RVGVKFSDSDLIGLPIRITVGKK-AADGIVEVKIKATGDTIEVHVDSLLETL 611


>gi|297816202|ref|XP_002875984.1| hypothetical protein ARALYDRAFT_323549 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297321822|gb|EFH52243.1| hypothetical protein ARALYDRAFT_323549 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 496

 Score =  120 bits (300), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 61/422 (14%), Positives = 127/422 (30%), Gaps = 99/422 (23%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHLW---------QQSGHWDS 313
           SG  F       I++ +  +   ++K          V +             +++ H + 
Sbjct: 33  SGCYFPRPLTMAIWEIMQIFFDAEMK------KMKVVKNWDFPLFVPPGVLEKENEHIEG 86

Query: 314 YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP 373
           +   +  V  +  +  ++   A +P +       F+  +K YR+LP              
Sbjct: 87  FAPEVGWVTKSIKSDLEV-PIATRPTSETVLYTYFSKWVKGYRDLPWECNN--------- 136

Query: 374 SGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
                  +R R F   + H  F TK +   E L+I  L   IY++F    ++    +  E
Sbjct: 137 ---PTPFIRSREFLWQEGHSAFATKAEADEELLQILELFRRIYEEFLAVPVVKGWKSEHE 193

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
           K  G                                      Y    E  + +       
Sbjct: 194 KFAGG------------------------------------LYTTSVEIFIPNTGRGVQG 217

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPL 548
             +  +  N    +   YV+   E      + +  +    R IG+MI     +    LP 
Sbjct: 218 ATSNCLGQNFAKTYEINYVDEKGETAT---VWQNSWTYSTRTIGVMIMIHGDDKGLILPP 274

Query: 549 WLSPIQAIVTTITSSAV------EYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIK 601
            ++P+Q +V  +           +      + L    +  E D  +E T  +K  +  +K
Sbjct: 275 KVAPLQVVVIAVPCKNANIQRIYDACTATVSALCEAGIRAEEDLGDEYTPGWKYSDWEMK 334

Query: 602 KIPIIIICGDKEASERSIG------------------IR--RFGSTTTQKVSLLDAIPIL 641
            +P+ I  G ++     +                   +R  R  +   + +     +  +
Sbjct: 335 GVPLRIEIGPRDLENDQVMKGLVFTEKTVMFGLNMELVRTVRRDNGVKEDIPRGSLVENV 394

Query: 642 TK 643
            +
Sbjct: 395 KE 396


>gi|254447045|ref|ZP_05060512.1| prolyl-tRNA synthetase [gamma proteobacterium HTCC5015]
 gi|198263184|gb|EDY87462.1| prolyl-tRNA synthetase [gamma proteobacterium HTCC5015]
          Length = 522

 Score =  120 bits (300), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 37/201 (18%), Positives = 73/201 (36%), Gaps = 8/201 (3%)

Query: 275 IFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           + + + + +R ++      E+  P +    LWQ+SG  + Y   +  +     + +  R 
Sbjct: 1   MLKKVEAIVREEMNSAGGVELLMPTIQPTELWQESGRLEQYGPELLRL-----SDRHERP 55

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
           F   P +      +    +KSY++LPV   +    +R+E      G+MR R F   DA+ 
Sbjct: 56  FCYGPTHEEVITDLARREIKSYKQLPVNFYQIQLKFRDEIRPRF-GVMRAREFVMKDAYS 114

Query: 394 FCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
           F    + + N    ++    +I+   G     V   T       S      A++    + 
Sbjct: 115 FHLDADSLQNTYEAMYRAYSNIFTRLGLRFRAVHADTGSIGGNASHEFHVLADSGEDAIA 174

Query: 453 DTIKNSSQDRINTGVLLGEGA 473
               +     +     L   A
Sbjct: 175 FCPDSDYAANVELAECLAPSA 195



 Score = 88.7 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 28/164 (17%), Positives = 62/164 (37%), Gaps = 13/164 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN- 545
           R  + G I Q+         A  ++ + +     ++    +G  + R I   IE    N 
Sbjct: 359 RGIEVGHIFQLGTKYSESMGATVLDENGKDS---VMTMGCYGIGVTRVIAAAIEQNHDNK 415

Query: 546 ---LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
               P  ++P +  +  +    +    +YA+E+    +S  + +  D R+     K  + 
Sbjct: 416 GIVWPDNIAPFKLAIVPLNQNKSERVRDYAEELYRQCQSKGIDVVLDDRDARPGVKFADI 475

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +  IP  I+ GD+     ++  +  G   ++ + L     +L 
Sbjct: 476 ELVGIPHRIVVGDRGLDNGALEYKGRGDADSRDIPLDQLDELLQ 519


>gi|313898260|ref|ZP_07831797.1| proline--tRNA ligase [Clostridium sp. HGF2]
 gi|312956642|gb|EFR38273.1| proline--tRNA ligase [Clostridium sp. HGF2]
          Length = 564

 Score =  120 bits (300), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 42/220 (19%), Positives = 87/220 (39%), Gaps = 8/220 (3%)

Query: 228 QQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI 287
           +   + +    E  +  D       +    I +  SG+      G ++ + +   +R ++
Sbjct: 2   KLSKSYFYTLRENVKDEDSTSGNLLVRAGMIKKSSSGIYMIMPMGKRVLKKIEEIVREEM 61

Query: 288 KD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA 346
                +E+  P ++ + ++++SG  +++ +NMFA+K      +  + + L P +      
Sbjct: 62  DAAGAQELLMPAMIPEEIYEKSGRREAFGSNMFALKD-----RYQKNYVLGPTHEELFTM 116

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL- 405
                  SY++ P  L +  + +R+E     +GL+RVR F   DA+ F   E    E   
Sbjct: 117 AAMMKGSSYKDFPYNLYQIQTKFRDETRPR-YGLIRVREFIMKDAYSFDIDEAGLQESYM 175

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
           K+     +I         +VK  T       S+      E
Sbjct: 176 KMFQAYKNIMDRCNLNYKIVKADTGAMGGSLSEEFQAITE 215



 Score = 88.7 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 32/154 (20%), Positives = 63/154 (40%), Gaps = 10/154 (6%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPI 553
           +           Y + ++ K HPV +    FG +ER +  ++E          P  ++P 
Sbjct: 411 LGTKYAKALGLEYQDVNN-KLHPVEMGCYGFG-LERCMAAIVEQHNDASGIIWPTSVAPF 468

Query: 554 QAIVTTITSSAVEYAQ---EIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           +  V  ++S   E  +   E+   LK   + +  D R E    K ++  +  IP  I  G
Sbjct: 469 EVAVVVVSSKDDEQMRIGNELYEALKKEGIDVLLDDRKERPGVKFKDMELIGIPYRITVG 528

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            +   + ++  R   +  +  VSL + + ++ KE
Sbjct: 529 -RGIKDGNVEFRARTADESSDVSLHEIVDMVKKE 561


>gi|218458539|ref|ZP_03498630.1| threonyl-tRNA synthetase [Rhizobium etli Kim 5]
          Length = 104

 Score =  120 bits (300), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 50/92 (54%), Positives = 63/92 (68%)

Query: 559 TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERS 618
           TITS A  Y  E+A  L+   L++ETDFRNE INYKIREHS+ K+P+II+CG KEA ER+
Sbjct: 1   TITSEADAYGLEVAEALREAGLNVETDFRNEKINYKIREHSVTKVPVIIVCGRKEAEERT 60

Query: 619 IGIRRFGSTTTQKVSLLDAIPILTKESLPPDC 650
           + IRR GS     + L  A+  LT E+ PPD 
Sbjct: 61  VNIRRLGSQDQVSMGLDAAVESLTLEATPPDI 92


>gi|313891198|ref|ZP_07824817.1| proline--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026]
 gi|313120561|gb|EFR43681.1| proline--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026]
          Length = 617

 Score =  120 bits (300), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 34/192 (17%), Positives = 80/192 (41%), Gaps = 10/192 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  ++    G+  +     +  + L   MR++
Sbjct: 4   SKMLIPTLREMPSDAQVISHALMLRAGYVRQVSA---GIYAYLPLANRTIEKLKGIMRQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
                  E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     
Sbjct: 61  FDKIGAVEMLAPALLTADLWRESGRYETYGEDLYKLKN-----RESSDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    +KSY++LP+ L +  + YR+E     +GL+R R F   D + F   ++  +   
Sbjct: 116 TLIRDAVKSYKQLPLNLYQIQAKYRDEKRPR-NGLLRTREFIMKDGYSFHQNDEDLDITY 174

Query: 406 KIHNLIISIYKD 417
           + +         
Sbjct: 175 EDYRKAYEAIFT 186



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/173 (19%), Positives = 62/173 (35%), Gaps = 22/173 (12%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S      +   + +  P+++     G   R +  +IE        
Sbjct: 441 RGIEIGHIFKLGTRYSNSLGATILDENGRAVPIVMGCYGIGVS-RILSAVIEQHARLFVN 499

Query: 542 ----------FKGNLPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRN 588
                     +  N P  L+P    + T+      A +   ++   L +    + TD RN
Sbjct: 500 KTPKGDYRFAWGINFPEELAPFDVHLITVNTKDQEAQDLTSKVEKDLTAKGYEVLTDDRN 559

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           E +  K  +  +  +PI I  G K A+E  + I+   S  + +V   + I  L
Sbjct: 560 ERVGSKFSDSDLIGLPIRITVGKK-AAEGIVEIKIKASGDSIEVHADNIIETL 611


>gi|153003352|ref|YP_001377677.1| prolyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
 gi|166980097|sp|A7H7J7|SYP_ANADF RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|152026925|gb|ABS24693.1| prolyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
          Length = 575

 Score =  120 bits (300), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 37/174 (21%), Positives = 71/174 (40%), Gaps = 10/174 (5%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
            H+ L R   +  +   G+G+  +     +    + + +R ++     +E   P +    
Sbjct: 25  SHKLLVRAGFIRQL---GAGIYDYLPLAKRTLAKIEAIVREEMDAIGGQEFYLPALHPAE 81

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           +W++SG W+    NMF +K   +       + L   +     A+    L+SYR+LP    
Sbjct: 82  IWKESGRWEVMGDNMFRLKDRKNG-----DYCLGMTHEEIFTAIARDELRSYRQLPQVWY 136

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           +  + +R+EP     GL+RVR FT  DA+ F       ++  +           
Sbjct: 137 QIQTKFRDEPRPK-SGLLRVRQFTMKDAYSFDVDRAGLDKSYEDQRRAYERIFT 189



 Score = 87.1 bits (214), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 33/156 (21%), Positives = 59/156 (37%), Gaps = 9/156 (5%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG--- 544
           +  + G I  +         A  +++   K  P+++     G +ER +   IE       
Sbjct: 410 KALEVGHIFKLGTKYSESMKATVLDADG-KAVPIVMGSYGIG-VERIMAAAIELHHDELG 467

Query: 545 -NLPLWLSPIQAIVTTITSSAV--EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
              P  ++P QA V T+       + A E+   L    L +  D R E    K ++  + 
Sbjct: 468 IRWPPAIAPFQATVLTLGPEPELKKAADELVKALSDAGLEVLHDDREERAGVKFKDADLV 527

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
            IP+ I  G K  +E  +  +  G    + V L + 
Sbjct: 528 GIPLRISVGKKGLAEGKVEWKLRGDKAVELVPLAEV 563


>gi|295693140|ref|YP_003601750.1| prolyl-tRNA synthetase [Lactobacillus crispatus ST1]
 gi|295031246|emb|CBL50725.1| Prolyl-tRNA synthetase [Lactobacillus crispatus ST1]
          Length = 565

 Score =  119 bits (299), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 44/216 (20%), Positives = 88/216 (40%), Gaps = 11/216 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++    H+ + R   +  +    +GV  +   G+++ +     + ++
Sbjct: 4   SKFFMPTLKEAPSDAVAESHKLMIRGGYIRQV---TAGVYAYLPLGYRVLRKAEGIIEQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +   +  E+  P +L   LWQ+SG +  Y A MF +K      +  R   L P +     
Sbjct: 61  MDKINVPEMIMPHLLPATLWQESGRYKKYGAEMFKLKD-----RHGRESLLGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNEC 404
            +    LKSY+++P+ L +  + +R+E      GL+R R F   D + F  T++Q+  + 
Sbjct: 116 EIIAKNLKSYKQMPLALYQIQTKFRDENRPRF-GLLRGREFVMLDGYSFAATRDQLDEQF 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
               N    I+K  G     V   +       S   
Sbjct: 175 DDQKNAYKRIFKRAGVTVHPVIADSGTMGGKNSTEF 210



 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 23/159 (14%), Positives = 51/159 (32%), Gaps = 8/159 (5%)

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL- 550
           + G I       ++         + K  PV++     G        + ++       W  
Sbjct: 407 EVGHIFKLGTYYTKTMGADFLDQNGKAKPVIMGSYGIGVTRMLSAAVEQHLTERGVAWPK 466

Query: 551 --SPIQAIVT---TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPI 605
             +P    +           E A+++          +  D R E    K  +  +   PI
Sbjct: 467 EIAPFAIHIVQMKMNKEDQTELAEKLEKKFSEK-YDVLYDDRKERAGVKFADADLVGAPI 525

Query: 606 IIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            I  G K A++  + ++R       ++S+ +    + +E
Sbjct: 526 RITIGKK-AADGIVEVKRPTDNKATEMSIDELDKFVNQE 563


>gi|294675120|ref|YP_003575736.1| phosphoribulokinase/uridine kinase family protein [Prevotella
           ruminicola 23]
 gi|294472773|gb|ADE82162.1| phosphoribulokinase/uridine kinase family protein [Prevotella
           ruminicola 23]
          Length = 553

 Score =  119 bits (299), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 49/265 (18%), Positives = 101/265 (38%), Gaps = 10/265 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            I +   D ++   PV +T  DV       +    ++  +N KV  +   + ++  +E +
Sbjct: 6   KIHIVNNDKAV-EVPVGSTIEDVYALSGVEIEHGPISAHVNNKVEGMHYRLYKQKQVEFL 64

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
                        S   ++ +AV  ++   +V+I   + +G + +    +P S D++  I
Sbjct: 65  DICSSSGSRAYTRSLFFVLCKAVHDLFTPCKVSIDIPVSNGSFVNLSIGRPISLDDVGAI 124

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
            ++MQEII    P  +   + E+A  +F+      KV++L+S   +   T Y    + D 
Sbjct: 125 RRRMQEIIDAALPIHRYETTTEEAIRMFDILHNRSKVKLLKS-TGRLYTTYYEIDGYIDY 183

Query: 183 CRGPHVRSTGQVKKFFKLMKVAG------AYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
             G  + +T Q+  F       G      +    +    ML +        +    Q + 
Sbjct: 184 YYGALLTNTKQLYLFGLEKYFDGLLLRLPSREHPNELGEMLHQDKMFGIFKEHHQWQDIL 243

Query: 237 FLEESEKRDHRKL-AREMDLFHIAE 260
            L      +   +     +L  I+E
Sbjct: 244 GLRTIGDLNETIMNGHSSELIQISE 268


>gi|238061935|ref|ZP_04606644.1| prolyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
 gi|237883746|gb|EEP72574.1| prolyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
          Length = 582

 Score =  119 bits (299), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 42/214 (19%), Positives = 77/214 (35%), Gaps = 11/214 (5%)

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK 288
             L        ++E   HR L R   +        G   W   G  +   +   +R ++ 
Sbjct: 1   MLLRTLREDPADAEVPSHRLLLRAGYIR---RAAPGGYTWLPLGKLVLDRVTDVVRGEMT 57

Query: 289 D-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
               +E++ P +L    ++ SG W  Y  ++F +       +      L P +      +
Sbjct: 58  AIGDQEVHFPALLPAEPYRTSGRWTEYGDDIFTL-----ADRRGAEHLLAPTHEELAALL 112

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
                 SYR+ PV L +  + +R+E      GL+R R F   DA+ F   +       + 
Sbjct: 113 VKDLFTSYRDFPVTLFQVQTKFRDEARPR-AGLLRGREFLMKDAYSFDLDDAGLTAAYER 171

Query: 408 HN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           H      I+   G E  +V+ ++       S+  
Sbjct: 172 HRAAYQRIFDQLGLEYAVVRATSGAMGGSASEEF 205



 Score = 77.9 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 23/167 (13%), Positives = 56/167 (33%), Gaps = 8/167 (4%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
            + R  + G I Q+       F    +    +   P M      G       I  ++   
Sbjct: 411 TMRRGIEVGHIFQLGRRYTDAFTVDVLGPAGKPVRPTM-GCYGIGVSRAVAAIAEQHHDE 469

Query: 545 NLPLWLS---PIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHS 599
              +W +   P    +        ++ A ++   L +  L +  D R   +   K  +  
Sbjct: 470 RGLVWPAAVAPCDVHLVAAGKGPQLDAALDLGTRLAAAGLRVLVDDRTHVSAGVKFTDAE 529

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           +  +P  ++ G +  ++  + +R   +    ++ +   +  L  E+L
Sbjct: 530 LIGLPRAVVVGRR-LADGYVELRDRATGERTELPVAGLVDRLRDEAL 575


>gi|167630762|ref|YP_001681261.1| phosphoribulokinase/uridine kinase family protein [Heliobacterium
           modesticaldum Ice1]
 gi|167593502|gb|ABZ85250.1| phosphoribulokinase/uridine kinase family protein [Heliobacterium
           modesticaldum Ice1]
          Length = 560

 Score =  119 bits (299), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 44/243 (18%), Positives = 96/243 (39%), Gaps = 9/243 (3%)

Query: 26  VAESISRSLAKKAVAVAINGKVCDLSD-PVREGSIEIITPEDPRSLAVIRHSCAHIMAEA 84
           +A  +        VAV ++  + DL   P R+  +E++       L V   S A ++   
Sbjct: 34  LAWELQPEYPAPIVAVRVDNVLEDLEYVPERDCLVEMVDMSTETGLRVYGQSLAFVLMRV 93

Query: 85  VQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHE 144
            + ++P  Q+ I   +  GFY +   ++P + + + ++ ++M E++    P  ++ +S  
Sbjct: 94  ARELFPGKQLEIQFSLNKGFYGELLGDEPLTPEMVDRLRERMWEVVRAAEPIKRKVVSRF 153

Query: 145 KARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVA 204
           +A  + E+     + ++L    ++E V +Y  G++        V  TG +  +  +    
Sbjct: 154 EALHILEASGRQDQADVL-RFRSREPVNIYTCGDYLAYSDEILVPHTGMITTYQLVHYFT 212

Query: 205 GA-YWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD------HRKLAREMDLFH 257
           G      D + P                 +   + +  +  D      H +  R  +L  
Sbjct: 213 GFLLRHPDQSDPFRIPPNVEQKQLAYIFRESDKWTKIVKVGDVRDLNLHNEAGRTGELIR 272

Query: 258 IAE 260
           IAE
Sbjct: 273 IAE 275


>gi|227878822|ref|ZP_03996729.1| prolyl-tRNA synthetase [Lactobacillus crispatus JV-V01]
 gi|256843344|ref|ZP_05548832.1| prolyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|256849837|ref|ZP_05555268.1| prolyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
 gi|262046917|ref|ZP_06019877.1| prolyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
 gi|293381211|ref|ZP_06627219.1| prolyl-tRNA synthetase [Lactobacillus crispatus 214-1]
 gi|312978246|ref|ZP_07789990.1| proline--tRNA ligase [Lactobacillus crispatus CTV-05]
 gi|227861570|gb|EEJ69182.1| prolyl-tRNA synthetase [Lactobacillus crispatus JV-V01]
 gi|256614764|gb|EEU19965.1| prolyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|256713326|gb|EEU28316.1| prolyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
 gi|260572899|gb|EEX29459.1| prolyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
 gi|290922251|gb|EFD99245.1| prolyl-tRNA synthetase [Lactobacillus crispatus 214-1]
 gi|310894964|gb|EFQ44034.1| proline--tRNA ligase [Lactobacillus crispatus CTV-05]
          Length = 565

 Score =  119 bits (299), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 44/216 (20%), Positives = 88/216 (40%), Gaps = 11/216 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++    H+ + R   +  +    +GV  +   G+++ +     + ++
Sbjct: 4   SKFFMPTLKEAPSDAVAESHKLMIRGGYIRQV---TAGVYAYLPLGYRVLRKAEGIIEQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +   +  E+  P +L   LWQ+SG +  Y A MF +K      +  R   L P +     
Sbjct: 61  MDKINVPEMIMPHLLPATLWQESGRYKKYGAEMFKLKD-----RHGRESLLGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNEC 404
            +    LKSY+++P+ L +  + +R+E      GL+R R F   D + F  T++Q+  + 
Sbjct: 116 EIIAKNLKSYKQMPLALYQIQTKFRDENRPRF-GLLRGREFVMLDGYSFAATRDQLDEQF 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
               N    I+K  G     V   +       S   
Sbjct: 175 DDQKNAYKRIFKRAGVTVHPVIADSGTMGGKNSTEF 210



 Score = 69.4 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 23/159 (14%), Positives = 51/159 (32%), Gaps = 8/159 (5%)

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL- 550
           + G I       ++         + K  PV++     G        + ++       W  
Sbjct: 407 EVGHIFKLGTYYTKTMGADFLDQNGKAKPVIMGSYGIGVTRMLSAAVEQHLTERGVAWPK 466

Query: 551 --SPIQAIVT---TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPI 605
             +P    +           E A+++          +  D R E    K  +  +   PI
Sbjct: 467 EIAPFAIHIVQMKMNKEDQTELAEKLEKKFSEK-YDVLYDDRKERAGVKFADADLVGAPI 525

Query: 606 IIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            I  G K A++  + ++R       ++S+ +    + +E
Sbjct: 526 RITIGKK-AADGIVEVKRPTDDKATEMSIDELDKFVNQE 563


>gi|322392576|ref|ZP_08066036.1| proline--tRNA ligase [Streptococcus peroris ATCC 700780]
 gi|321144568|gb|EFX39969.1| proline--tRNA ligase [Streptococcus peroris ATCC 700780]
          Length = 617

 Score =  119 bits (299), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 77/192 (40%), Gaps = 10/192 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  ++    GV  +     ++ +     MR++
Sbjct: 4   SKMLIPTLREMPSDAQVISHALMLRAGYVRQVSA---GVYSYLPLANRVIEKAKKIMRQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
                  E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     
Sbjct: 61  FDKIGAVEMLVPALLSADLWRESGRYETYGEDLYKLKN-----RESSDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           A+    +KSY++LP+ L +    YR+E     +GL+R R F   D + F       +   
Sbjct: 116 AIVRDSVKSYKQLPLNLYQIQPKYRDEKRPR-NGLLRTREFIMKDGYSFHANYDSLDVTY 174

Query: 406 KIHNLIISIYKD 417
             +         
Sbjct: 175 DEYKAAYERIFT 186



 Score = 67.5 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 30/172 (17%), Positives = 60/172 (34%), Gaps = 20/172 (11%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S      V   + +  P+++     G       +M ++       
Sbjct: 441 RGIEIGHIFKLGTRYSASMGTDVLDENGRAVPIIMGCYGIGVSRLLSAVMEQHARLFVNK 500

Query: 542 ---------FKGNLPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNE 589
                    +  N P  L+P    +  +     +++     I   L +    + TD RNE
Sbjct: 501 TPKGEYRYAWGINFPKELAPFDVHLIPVNVKDEASLALTNHIEEALVNKGYEVLTDDRNE 560

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            +  K  +  +  +PI I  G K A+E  + ++   +  T +V   + +  L
Sbjct: 561 RVGVKFSDSDLIGLPIRITVGKK-AAEGIVEVKIKATGDTIEVHADNLLETL 611


>gi|160915433|ref|ZP_02077644.1| hypothetical protein EUBDOL_01441 [Eubacterium dolichum DSM 3991]
 gi|158432553|gb|EDP10842.1| hypothetical protein EUBDOL_01441 [Eubacterium dolichum DSM 3991]
          Length = 553

 Score =  119 bits (299), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 37/186 (19%), Positives = 80/186 (43%), Gaps = 8/186 (4%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
            I +  +G+      G ++ + +   +R ++     +E+  P ++ + +++ SG  D++ 
Sbjct: 21  MIKKSSAGIYMIMPMGKRVLKKIEDIVREEMDAAGAQELLMPALIPEEVYEISGRRDAFG 80

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
           +NMFA+K      +  + + L P +            +SY++ P  L +  + +R+E   
Sbjct: 81  SNMFALKD-----RYQKNYVLGPTHEELFTLAAMMKGRSYKDFPYNLYQIQTKFRDETRP 135

Query: 376 SLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
             +GL+R R F   DA+ F    E +    +K+ +    I+        +VK  T     
Sbjct: 136 R-YGLIRTREFIMKDAYSFDIDNEHLHESYMKMFDAYKKIFDRCDLNYKIVKADTGAMGG 194

Query: 435 VGSDAL 440
             S+  
Sbjct: 195 SLSEEF 200



 Score = 90.6 bits (223), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 65/153 (42%), Gaps = 10/153 (6%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPI 553
           +           Y+++++   HPV +     G +ER +  ++E    +     PL ++P 
Sbjct: 401 LGNKYAKALGLEYLDANNT-LHPVEMGCYGLG-LERTLASIVEQHHDDDGIIWPLSVAPY 458

Query: 554 QAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           Q  +  ++      V  A E+   LK+    +  D R E    K ++  +  IP  I  G
Sbjct: 459 QVAIVIVSMKDEEQVRIANELYETLKAEGYDVLLDDRKERPGVKFKDMELIGIPYRITVG 518

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +  ++ ++ +R  G+   ++V++ + +  L  
Sbjct: 519 -RGIAQGNVELRARGAHENEEVAIENVVTYLQN 550


>gi|171778813|ref|ZP_02919875.1| hypothetical protein STRINF_00734 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171282459|gb|EDT47883.1| hypothetical protein STRINF_00734 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 618

 Score =  119 bits (299), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 36/192 (18%), Positives = 80/192 (41%), Gaps = 10/192 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  +        +++   H  + R   +  ++    G+  +     +  +     MR +
Sbjct: 4   SQMLIPTLREMPSDAQVISHALMVRAGYVRQVSA---GIYAYLPLANRTIEKFKKIMREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +     E+  P +L+  LW++SG +++Y  +++ +K      +D   F L P +     
Sbjct: 61  FEKIGAVEMLAPALLNADLWRESGRYETYGEDLYKLKN-----RDKSDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           ++    +KSY++LP+ L +  S YR+E     +GL+R R F   D + F    +  +   
Sbjct: 116 SLVRDAVKSYKQLPLNLYQIQSKYRDEKRPR-NGLLRTREFIMKDGYSFHADYEGLDTTY 174

Query: 406 KIHNLIISIYKD 417
           + +         
Sbjct: 175 EDYRKAYEAIFT 186



 Score = 71.0 bits (172), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 35/181 (19%), Positives = 70/181 (38%), Gaps = 27/181 (14%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------ 541
           R  + G I  +         A  ++ +  +  P+++     G   R +  +IE       
Sbjct: 441 RGIEIGHIFKLGTRYSESMGATILDQNG-RAIPIVMGCYGIGVS-RILSAVIEQHARLFV 498

Query: 542 -----------FKGNLPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFR 587
                      +  N P  L+P    V T+      A     ++   L +    +  D R
Sbjct: 499 SKTPKGAYRFAWGINFPKELAPFDVHVITVNVKDEEAQALTAKVEAELVAKGYEVLVDNR 558

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV---SLLDAIPILTKE 644
           NE +  K  +  +  +PI +  G K A++  + ++   +  T +V   +L++ + ILTKE
Sbjct: 559 NERVGSKFSDSDLIGLPIRVTVGKK-AADGIVEVKIKATGDTIEVNAENLIETLEILTKE 617

Query: 645 S 645
           +
Sbjct: 618 N 618


>gi|295426319|ref|ZP_06818978.1| proline--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
 gi|295063992|gb|EFG54941.1| proline--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
          Length = 566

 Score =  119 bits (299), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 45/216 (20%), Positives = 89/216 (41%), Gaps = 11/216 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++    H+ + R   +  +    +GV  +   G+++ +   + M  +
Sbjct: 4   SKFFMPTLKEAPADAVAESHKLMLRGGYIRQV---TAGVYSYLPLGFRVLRKAENIMEDE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++  +  E+  P  L   LWQ+SG +  Y A MF +K      +  R   L P +     
Sbjct: 61  MEKINVPEMMMPHFLPATLWQESGRYKKYGAEMFKLKD-----RHGRESLLGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNEC 404
            +    LKSY+++P+ L +  + +R+E      GL+R R F   DA+ F  T+EQ+  + 
Sbjct: 116 EIIAKNLKSYKQMPIALYQIQTKFRDENRPRF-GLLRGREFVMLDAYSFAATREQLDEQF 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
                   ++Y+  G     V   +       S   
Sbjct: 175 DDEKRAFENVYRRCGVTVHPVIADSGTMGGKNSTEF 210



 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 25/160 (15%), Positives = 55/160 (34%), Gaps = 9/160 (5%)

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI----MIENFKGNLP 547
           + G I       ++        ++ K  PV++     G       +    +  +     P
Sbjct: 407 EVGHIFKLGTYYTKTMGADFLDNNGKAKPVIMGSYGIGVTRMLSAVVEQHLTNHGGIAWP 466

Query: 548 LWLSPIQAIVT---TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             ++P    +           + A+++   L +    +  D R E    K  +  +   P
Sbjct: 467 KEIAPFSIHLIQMKMNNDEQTQLAEKLEKELSAK-YDVLYDDRKERPGVKFNDADLVGAP 525

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           + I  G K A++  + ++R       ++S+      LTKE
Sbjct: 526 VRITIGRK-AADGIVEVKRPNDDKATEISVDQLNDYLTKE 564


>gi|283769476|ref|ZP_06342372.1| proline--tRNA ligase [Bulleidia extructa W1219]
 gi|283103744|gb|EFC05130.1| proline--tRNA ligase [Bulleidia extructa W1219]
          Length = 561

 Score =  119 bits (299), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 41/216 (18%), Positives = 91/216 (42%), Gaps = 11/216 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
                       ++ + +    L R      I +  +GV      G K+F  + S ++ +
Sbjct: 4   KNSYFFTLRENAKDEDSQSSNLLVRAGM---IKKSSTGVYMILPMGLKVFNKIKSIIQEE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++    +E+  P ++ + ++  SG  + + ++MF++K   +     + + L P +     
Sbjct: 61  MEAIHCQELLMPSLIPEEVYVASGRREGFGSDMFSLKDRKN-----QNYVLGPTHEELFA 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
                 ++SY+++P  + +  + +R+EP    +GL+RVR F   DA+ F   E   +   
Sbjct: 116 TAAKLKIRSYKDMPFSIYQIQTKFRDEPRPR-YGLIRVREFQMKDAYSFDANEAGMDSSY 174

Query: 406 -KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            K      +I+   G   ++VK  T     + S+  
Sbjct: 175 NKQFQAYKNIFDRLGLNYVVVKADTGVMGGLLSEEF 210



 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 65/156 (41%), Gaps = 13/156 (8%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE-RFIGIMIENF----KGNLPLWLSP 552
           +        +  Y N++++  +   +    +G    R +  ++E        N P  L+P
Sbjct: 411 LGTKYSKAMDLQYSNANNQLEY---VWMGCYGIGPARAMAALVEQNYDENGINWPKNLAP 467

Query: 553 IQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIIC 609
            +  +T I+      ++ A ++ + L+   + +  D R+E    K ++  +  IP  I  
Sbjct: 468 YRCSITIISMKDDQQIQVANDLYDQLRKAGIDVLLDDRDERPGVKFKDMDLIGIPTQITV 527

Query: 610 GDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           G K   +  + I+  G    Q +S+   +  LT++S
Sbjct: 528 G-KNVVDGQVEIKERGHM-KQSISIDSVLDYLTQKS 561


>gi|332523321|ref|ZP_08399573.1| proline--tRNA ligase [Streptococcus porcinus str. Jelinkova 176]
 gi|332314585|gb|EGJ27570.1| proline--tRNA ligase [Streptococcus porcinus str. Jelinkova 176]
          Length = 617

 Score =  119 bits (299), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 34/192 (17%), Positives = 80/192 (41%), Gaps = 10/192 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  ++    G+  +     +  + L   MR++
Sbjct: 4   SKMLIPTLREMPSDAQVISHALMLRAGYVRQVSA---GIYAYLPLANRTIEKLKGIMRQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
                  E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     
Sbjct: 61  FDKIGAVEMLAPALLTADLWRESGRYETYGEDLYKLKN-----RESSDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    +KSY++LP+ L +  + YR+E     +GL+R R F   D + F   ++  +   
Sbjct: 116 TLIRDAVKSYKQLPLNLYQIQAKYRDEKRPR-NGLLRTREFIMKDGYSFHQNDEDLDITY 174

Query: 406 KIHNLIISIYKD 417
           + +         
Sbjct: 175 EDYRKAYEAIFT 186



 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/173 (20%), Positives = 64/173 (36%), Gaps = 22/173 (12%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S+     +   + +  P+++     G   R +  +IE        
Sbjct: 441 RGIEIGHIFKLGTRYSKSLGATILDENGRAVPIVMGCYGIGVS-RILSAVIEQHARLFVN 499

Query: 542 ----------FKGNLPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRN 588
                     +  N P  L+P    + T+      A +   ++ + L +    + TD RN
Sbjct: 500 KTPKGDYRFAWGINFPEELAPFDVHLITVNTKDQDAQDLTSKVEHDLMTKGYEVLTDDRN 559

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           E +  K  +  +  +PI I  G K ASE  + I+   S  + +V   + I  L
Sbjct: 560 ERVGSKFSDSDLIGLPIRITVGKK-ASEGIVEIKIKASGDSIEVHADNIIETL 611


>gi|154502787|ref|ZP_02039847.1| hypothetical protein RUMGNA_00601 [Ruminococcus gnavus ATCC 29149]
 gi|153796670|gb|EDN79090.1| hypothetical protein RUMGNA_00601 [Ruminococcus gnavus ATCC 29149]
          Length = 556

 Score =  119 bits (298), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 46/199 (23%), Positives = 78/199 (39%), Gaps = 6/199 (3%)

Query: 13  SIKNFPVHATGSDVAESISRSLAKKAVAVAING-KVCDLSDPVR-EGSIEIITPEDPRSL 70
            +K +        +AE        K V   ++G ++ +L+  ++ +  IE +T +DP   
Sbjct: 13  KVKCYERGIAYKKIAEEFQEEYPAKIVLALVDGTRLQELNKRLKQDCKIEFVTVKDPIGY 72

Query: 71  AVIRHSCAHIMAEAVQSIWPEV---QVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQ 127
              R S   ++ +AV  +        V I   + +G+Y   D +       L QI+ +M 
Sbjct: 73  ETYRRSLCFMLVKAVHDVGGHDKIRNVKIHFSVSNGYYCTIDGDVVLDQKFLDQIDARMH 132

Query: 128 EIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPH 187
           E+     P  K+ +    A ELF       K E L        V +YR  E+ D   G  
Sbjct: 133 ELAEAQIPIEKRSVHTSDAVELFGRHGMYDK-ERLFGYRRVSKVNIYRMNEFEDYYYGYM 191

Query: 188 VRSTGQVKKFFKLMKVAGA 206
           V  +G +K F   +   G 
Sbjct: 192 VPDSGYLKNFALHLYDEGF 210


>gi|111658322|ref|ZP_01409011.1| hypothetical protein SpneT_02000512 [Streptococcus pneumoniae
           TIGR4]
          Length = 612

 Score =  119 bits (298), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 45/251 (17%), Positives = 94/251 (37%), Gaps = 16/251 (6%)

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK 288
             +        +++   H  + R   +  ++    GV  +     ++ +   + MR++ +
Sbjct: 1   MPIPTLREMPSDAQVISHALMLRAGYVRQVSA---GVYSYLPLANRVIEKAKNIMRQEFE 57

Query: 289 D-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
                E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     A+
Sbjct: 58  KIGAVEMLAPALLSAELWRESGRYETYGEDLYKLKN-----REKSDFILGPTHEETFTAI 112

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
               +KSY++LP+ L +    YR+E     +GL+R R F   DA+ F       +     
Sbjct: 113 VRDSVKSYKQLPLNLYQIQPKYRDEKRPR-NGLLRTREFIMKDAYSFHANYDSLDSVYDE 171

Query: 408 HNLIISIYKDFGFEKIMVKLSTRPEKRVGSD-----ALWDDAENIMKGVLDTIKNSSQDR 462
           +                  +        G D     A+     ++ + V+     +S D 
Sbjct: 172 YKAAYERIFTRSGLDFKAIIGDGGAMG-GKDSQEFMAITSARTDLDRWVVLDKSVASFDE 230

Query: 463 INTGVLLGEGA 473
           I   V     A
Sbjct: 231 IPAEVQEEIKA 241



 Score = 66.3 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 62/173 (35%), Gaps = 22/173 (12%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S      V   + +  P+++     G       +M ++       
Sbjct: 436 RGIEIGHIFKLGTRYSASMGADVLDENGRAVPIIMGCYGIGVSRLLSAVMEQHARLFVNK 495

Query: 542 ---------FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKS----HHLSIETDFRN 588
                    +  N P  L+P    + T+     E AQ +   L++        + TD RN
Sbjct: 496 TPKGEYRYAWGINFPKELAPFDVHLITVNVKDEE-AQALTEKLEASLMGAGYEVLTDDRN 554

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           E +  K  +  +  +PI I  G K A++  + ++   +  T +V   + +  L
Sbjct: 555 ERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVKIKATGDTIEVHADNVLETL 606


>gi|288904427|ref|YP_003429648.1| prolyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
 gi|306830460|ref|ZP_07463630.1| proline--tRNA ligase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325977424|ref|YP_004287140.1| prolyl-tRNA synthetase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|288731152|emb|CBI12700.1| prolyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
 gi|304427485|gb|EFM30587.1| proline--tRNA ligase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325177352|emb|CBZ47396.1| proS [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069]
          Length = 618

 Score =  119 bits (298), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 36/192 (18%), Positives = 81/192 (42%), Gaps = 10/192 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  +        +++   H  + R   +  ++    G+  +     +  +   + MR +
Sbjct: 4   SQMLIPTLREMPSDAQVISHALMVRAGYVRQVSA---GIYAYLPLANRTIEKFKAIMREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +     E+  P +L+  LW++SG +++Y  +++ +K      +D   F L P +     
Sbjct: 61  FEKIGAVEMLAPALLNADLWRESGRYETYGEDLYKLKN-----RDKSDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           ++    +KSY++LP+ L +  S YR+E     +GL+R R F   D + F    +  +   
Sbjct: 116 SLVRDAVKSYKQLPLNLYQIQSKYRDEKRPR-NGLLRTREFIMKDGYSFHADYEGLDTTY 174

Query: 406 KIHNLIISIYKD 417
           + +         
Sbjct: 175 EDYRKAYEAIFT 186



 Score = 71.7 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 35/181 (19%), Positives = 70/181 (38%), Gaps = 27/181 (14%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------ 541
           R  + G I  +         A  ++ +  +  P+++     G   R +  +IE       
Sbjct: 441 RGIEIGHIFKLGTRYSESMGATILDQNG-RAIPIVMGCYGIGVS-RILSAVIEQHARLFV 498

Query: 542 -----------FKGNLPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFR 587
                      +  N P  L+P    V T+      A     ++   L +    +  D R
Sbjct: 499 SKTPKGAYRFAWGINFPKELAPFDVHVITVNVKDEEAQALTAKVEAELVAKGYEVLVDDR 558

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV---SLLDAIPILTKE 644
           NE +  K  +  +  +PI +  G K A++  + ++   +  T +V   +L++ + ILTKE
Sbjct: 559 NERVGSKFSDSDLIGLPIRVTVGKK-AADGIVEVKIKATGDTIEVNAENLIETLEILTKE 617

Query: 645 S 645
           +
Sbjct: 618 N 618


>gi|306832697|ref|ZP_07465834.1| proline--tRNA ligase [Streptococcus bovis ATCC 700338]
 gi|304425153|gb|EFM28282.1| proline--tRNA ligase [Streptococcus bovis ATCC 700338]
          Length = 618

 Score =  119 bits (298), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 36/192 (18%), Positives = 81/192 (42%), Gaps = 10/192 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q  +        +++   H  + R   +  ++    G+  +     +  +   + MR +
Sbjct: 4   SQMLIPTLREMPSDAQVISHALMVRAGYVRQVSA---GIYAYLPLANRTIEKFKAIMREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +     E+  P +L+  LW++SG +++Y  +++ +K      +D   F L P +     
Sbjct: 61  FEKIGAVEMLAPALLNADLWRESGRYETYGEDLYKLKN-----RDKSDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           ++    +KSY++LP+ L +  S YR+E     +GL+R R F   D + F    +  +   
Sbjct: 116 SLVRDAVKSYKQLPLNLYQIQSKYRDEKRPR-NGLLRTREFIMKDGYSFHADYEGLDTTY 174

Query: 406 KIHNLIISIYKD 417
           + +         
Sbjct: 175 EDYRKAYEAIFT 186



 Score = 72.1 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 35/181 (19%), Positives = 70/181 (38%), Gaps = 27/181 (14%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------ 541
           R  + G I  +         A  ++ +  +  P+++     G   R +  +IE       
Sbjct: 441 RGIEIGHIFKLGTRYSESMGATILDQNG-RAIPIIMGCYGIGVS-RILSAVIEQHARLFV 498

Query: 542 -----------FKGNLPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFR 587
                      +  N P  L+P    V T+      A     ++   L +    +  D R
Sbjct: 499 SKTPKGAYRFAWGINFPKELAPFDVHVITVNVKDEEAQALTAKVEAELVAKGYEVLVDDR 558

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV---SLLDAIPILTKE 644
           NE +  K  +  +  +PI +  G K A++  + ++   +  T +V   +L++ + ILTKE
Sbjct: 559 NERVGSKFSDSDLIGLPIRVTVGKK-AADGIVEVKIKATGDTIEVNAENLIETLEILTKE 617

Query: 645 S 645
           +
Sbjct: 618 N 618


>gi|50550793|ref|XP_502869.1| YALI0D15620p [Yarrowia lipolytica]
 gi|49648737|emb|CAG81057.1| YALI0D15620p [Yarrowia lipolytica]
          Length = 445

 Score =  119 bits (298), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 62/416 (14%), Positives = 129/416 (31%), Gaps = 74/416 (17%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
           +++   SG+      G ++ + + + +R ++      E++     D  LW+++G  ++  
Sbjct: 31  YVSYPSSGLANLLPLGLRVQRKIENIIRSELDSIGCAEVSLSNFSDPDLWRKTGRINN-- 88

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
             +F V    +         + P +      +    + S ++LP+   + G  YRNE   
Sbjct: 89  GELFRVNDGSEDPP-----IIAPTHEEEITNLIAQKISSPKDLPILWYQIGKKYRNEARP 143

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK------------DFGFEKI 423
              GL+R + FT  D + F   E    E   +                     D G    
Sbjct: 144 R-GGLLRGKEFTMKDLYSFDVDEPRALESYDLVRKAYDQIFGKLGVPVKSVAADSGAIGG 202

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD------RINTGVLLGEGAF--- 474
                       G D L   +       ++  + ++ D       +N  ++  E +    
Sbjct: 203 SHSHEYHVIDASGEDTLVTCSSCDYSANIEVAERAAGDSETICTEVNGVLVTHESSHAVN 262

Query: 475 ----------YG---PKFEYILKDAIGRDWQCGT-----------------------IQV 498
                     YG    K    L+D +  +                              +
Sbjct: 263 PRLVDRALSSYGHDAYKISM-LRDGVSHNLTTPKEGDSCPNCTSSLKFSNAIEVGHTFYL 321

Query: 499 DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE----NFKGNLPLWLSPIQ 554
                   +  + NS + K  P  +     G I R +  + E          P  ++P +
Sbjct: 322 GTKYSKSLSCDFKNSEN-KLTPAFMGCYGIG-ITRLVAAIAEVSRDQHGLKWPSNVAPYE 379

Query: 555 AIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET-INYKIREHSIKKIPIIIIC 609
            +V     +      + A+ L +       D R +  I +KI E  +   P +++ 
Sbjct: 380 TVVILGGGATESTLLDKASELGALLQDAVIDDRPKRSIGWKINEAKLMGFPQVVVV 435


>gi|309808806|ref|ZP_07702691.1| proline--tRNA ligase [Lactobacillus iners LactinV 01V1-a]
 gi|308167932|gb|EFO70065.1| proline--tRNA ligase [Lactobacillus iners LactinV 01V1-a]
          Length = 472

 Score =  119 bits (298), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 41/199 (20%), Positives = 82/199 (41%), Gaps = 11/199 (5%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           + H+ + R   +  +    +GV  +    + + +     +  ++++ +  E+  P  L  
Sbjct: 21  KSHQLMLRGGYIRQV---TAGVYAYLPLAYLVLRKAEKIIEEEMENINVPEMIMPHFLPA 77

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SG    Y   MF +K      +  R   L P +      +    +KSY+++P+ L
Sbjct: 78  TLWEESGRLPKYGPEMFRLKD-----RHGRESLLGPTHEETFTEIIGKNIKSYKQMPIAL 132

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFE 421
            +  + +R+E      GL+R R F   D + F  T+EQ+  +     +    I+K  G E
Sbjct: 133 YQIQTKFRDENRPRF-GLLRGREFVMLDGYSFAATREQLDKQFDDQKHAYKKIFKRCGVE 191

Query: 422 KIMVKLSTRPEKRVGSDAL 440
              V  ++       S   
Sbjct: 192 VYPVIANSGTMGGKNSTEF 210


>gi|309807201|ref|ZP_07701175.1| proline--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
 gi|308166422|gb|EFO68627.1| proline--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
          Length = 472

 Score =  119 bits (298), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 41/199 (20%), Positives = 82/199 (41%), Gaps = 11/199 (5%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           + H+ + R   +  +    +GV  +    + + +     +  ++++ +  E+  P  L  
Sbjct: 21  KSHQLMLRGGYIRQV---TAGVYAYLPLAYLVLRKAEKIIEEEMENINVPEMIMPHFLPA 77

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SG    Y   MF +K      +  R   L P +      +    +KSY+++P+ L
Sbjct: 78  TLWEESGRLPKYGPEMFRLKD-----RHGRESLLGPTHEETFTEIIGKNIKSYKQMPIAL 132

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFE 421
            +  + +R+E      GL+R R F   D + F  T+EQ+  +     +    I+K  G E
Sbjct: 133 YQIQTKFRDENRPRF-GLLRGREFVMLDGYSFAATREQLDKQFDDQKHAYKKIFKRCGVE 191

Query: 422 KIMVKLSTRPEKRVGSDAL 440
              V  ++       S   
Sbjct: 192 VYPVIANSGTMGGKNSTEF 210


>gi|309805512|ref|ZP_07699557.1| proline--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
 gi|308165163|gb|EFO67401.1| proline--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
          Length = 472

 Score =  119 bits (297), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 41/199 (20%), Positives = 82/199 (41%), Gaps = 11/199 (5%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           + H+ + R   +  +    +GV  +    + + +     +  ++++ +  E+  P  L  
Sbjct: 21  KSHQLMLRGGYIRQV---TAGVYAYLPLAYLVLRKAEKIIEEEMENINVPEMIMPHFLPA 77

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SG    Y   MF +K      +  R   L P +      +    +KSY+++P+ L
Sbjct: 78  TLWEESGRLPKYGPEMFRLKD-----RHGRESLLGPTHEETFTEIIGKNIKSYKQMPIAL 132

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFE 421
            +  + +R+E      GL+R R F   D + F  T+EQ+  +     +    I+K  G E
Sbjct: 133 YQIQTKFRDENRPRF-GLLRGREFVMLDGYSFAATREQLDKQFDDQKHAYKKIFKRCGVE 191

Query: 422 KIMVKLSTRPEKRVGSDAL 440
              V  ++       S   
Sbjct: 192 VYPVIANSGTMGGKNSTEF 210


>gi|315653428|ref|ZP_07906350.1| proline--tRNA ligase [Lactobacillus iners ATCC 55195]
 gi|315489353|gb|EFU78993.1| proline--tRNA ligase [Lactobacillus iners ATCC 55195]
          Length = 487

 Score =  119 bits (297), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 41/199 (20%), Positives = 82/199 (41%), Gaps = 11/199 (5%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           + H+ + R   +  +    +GV  +    + + +     +  ++++ +  E+  P  L  
Sbjct: 36  KSHQLMLRGGYIRQV---TAGVYAYLPLAYLVLRKAEKIIEEEMENINVPEMIMPHFLPA 92

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SG    Y   MF +K      +  R   L P +      +    +KSY+++P+ L
Sbjct: 93  TLWEESGRLPKYGPEMFRLKD-----RHGRESLLGPTHEETFTEIIGKNIKSYKQMPIAL 147

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFE 421
            +  + +R+E      GL+R R F   D + F  T+EQ+  +     +    I+K  G E
Sbjct: 148 YQIQTKFRDENRPRF-GLLRGREFVMLDGYSFAATREQLDKQFDDQKHAYKKIFKRCGVE 206

Query: 422 KIMVKLSTRPEKRVGSDAL 440
              V  ++       S   
Sbjct: 207 VYPVIANSGTMGGKNSTEF 225


>gi|331082066|ref|ZP_08331194.1| hypothetical protein HMPREF0992_00118 [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|330405661|gb|EGG85191.1| hypothetical protein HMPREF0992_00118 [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 555

 Score =  119 bits (297), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 52/238 (21%), Positives = 95/238 (39%), Gaps = 5/238 (2%)

Query: 12  GSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSL 70
           G  K +P   T   +A+          V +  + K+C+L   ++ EG+IE IT +D    
Sbjct: 12  GEQKEYPYGTTYGKIAQEYQSKYEYPIVLLMKDNKLCELHKKLKKEGTIEFITTQDQIGH 71

Query: 71  AVIRHSCAHIMAEAVQSIWPE---VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQ 127
              R S + ++ +A+  +       +V +   +  G+YY  D +   + D L +++  M 
Sbjct: 72  ETYRRSVSLLLLKALHHVAGYDNITKVTMHYSVSSGYYYTIDGDIVLNEDFLNKVKAYML 131

Query: 128 EIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPH 187
           E++ R    LK+ +  ++A ELF + K   K E L        V +Y   E+ D   G  
Sbjct: 132 ELVERKISILKRSVGTDEAIELFHNHKMYDK-EKLFRFRRVSRVNIYSLEEYEDYFYGFM 190

Query: 188 VRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           V  TG +K F   +   G   +                    ++ +      E+ + D
Sbjct: 191 VNHTGYLKYFDLYLYDDGLVLQLPKRENPKEVPPFVPRPKIFQVQKESAQWSEAIQAD 248


>gi|323466334|gb|ADX70021.1| Proline-tRNA ligase [Lactobacillus helveticus H10]
          Length = 565

 Score =  119 bits (297), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 43/216 (19%), Positives = 88/216 (40%), Gaps = 11/216 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++    H+ + R   +  +    +GV  +   G+++ +     +  +
Sbjct: 4   SKFFMPTLKEAPSDAVAESHKLMIRGGYIRQV---TAGVYAYLPLGYRVLRKAEGIIEDE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++  +  E+  P +L   LWQ+SG +  Y A MF +K      +  R   L P +     
Sbjct: 61  MEKINVPEMIMPHLLPATLWQESGRYKKYGAEMFKLKD-----RHGRESLLGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNEC 404
            +    LKSY+++P+ L +  + +R+E      GL+R R F   D + F  T++Q+  + 
Sbjct: 116 EIIAKNLKSYKQMPLALYQIQTKFRDENRPRF-GLLRGREFVMLDGYSFAATRDQLDEQF 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
               +    I+K  G     V   +       S   
Sbjct: 175 DDQKSAYKRIFKRAGVTVHPVIADSGTMGGKNSTEF 210



 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 23/159 (14%), Positives = 52/159 (32%), Gaps = 8/159 (5%)

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL- 550
           + G I       ++         + K  PV++     G        + ++   +   W  
Sbjct: 407 EVGHIFKLGTYYTKTMGADFLDQNGKAKPVIMGSYGIGVTRMLSAAVEQHLTEHGVAWPK 466

Query: 551 --SPIQAIVT---TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPI 605
             +P    +           E A+++          +  D R E    K  +  +   PI
Sbjct: 467 EIAPFAIHIVQMKMNKEDQTELAEKLEKKFSEK-YDVLYDDRKERAGVKFADADLVGAPI 525

Query: 606 IIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            I  G K A++  + ++R       ++S+ +    + +E
Sbjct: 526 RITVGKK-AADGIVEVKRPTDDKATEMSIDELDKFVNQE 563


>gi|161507687|ref|YP_001577641.1| prolyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
 gi|172048310|sp|A8YVR3|SYP_LACH4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|160348676|gb|ABX27350.1| Prolyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
          Length = 565

 Score =  119 bits (297), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 43/216 (19%), Positives = 88/216 (40%), Gaps = 11/216 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++    H+ + R   +  +    +GV  +   G+++ +     +  +
Sbjct: 4   SKFFMPTLKEAPSDAVAESHKLMIRGGYIRQV---TAGVYAYLPLGYRVLRKAEGIIEDE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++  +  E+  P +L   LWQ+SG +  Y A MF +K      +  R   L P +     
Sbjct: 61  MEKINVPEMIMPHLLPATLWQESGRYKKYGAEMFKLKD-----RHGRESLLGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNEC 404
            +    LKSY+++P+ L +  + +R+E      GL+R R F   D + F  T++Q+  + 
Sbjct: 116 EIIAKNLKSYKQMPLALYQIQTKFRDENRPRF-GLLRGREFVMLDGYSFAATRDQLDEQF 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
               +    I+K  G     V   +       S   
Sbjct: 175 DDQKSAYKRIFKRAGVTVHPVIADSGTMGGKNSTEF 210



 Score = 68.7 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 23/159 (14%), Positives = 52/159 (32%), Gaps = 8/159 (5%)

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL- 550
           + G I       ++         + K  PV++     G        + ++   +   W  
Sbjct: 407 EVGHIFKLGTYYTKTMGADFLDQNGKAKPVIMGSYGIGVTRMLSAAVEQHLTEHGVAWPK 466

Query: 551 --SPIQAIVT---TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPI 605
             +P    +           E A+++          +  D R E    K  +  +   PI
Sbjct: 467 EIAPFAIHIVQMKMNKEDQTELAEKLEKKFSEK-YDVLYDDRKERAGVKFADADLVGAPI 525

Query: 606 IIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            I  G K A++  + ++R       ++S+ +    + +E
Sbjct: 526 RITVGKK-AADGIVEVKRPTDDKATEISIDELDKFVNQE 563


>gi|260101368|ref|ZP_05751605.1| proline-tRNA ligase [Lactobacillus helveticus DSM 20075]
 gi|260084820|gb|EEW68940.1| proline-tRNA ligase [Lactobacillus helveticus DSM 20075]
 gi|328465729|gb|EGF36933.1| prolyl-tRNA synthetase [Lactobacillus helveticus MTCC 5463]
          Length = 565

 Score =  119 bits (297), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 43/216 (19%), Positives = 88/216 (40%), Gaps = 11/216 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++    H+ + R   +  +    +GV  +   G+++ +     +  +
Sbjct: 4   SKFFMPTLKEAPSDAVAESHKLMIRGGYIRQV---TAGVYAYLPLGYRVLRKAEGIIEDE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++  +  E+  P +L   LWQ+SG +  Y A MF +K      +  R   L P +     
Sbjct: 61  MEKINVPEMIMPHLLPATLWQESGRYKKYGAEMFKLKD-----RHGRESLLGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNEC 404
            +    LKSY+++P+ L +  + +R+E      GL+R R F   D + F  T++Q+  + 
Sbjct: 116 EIIAKNLKSYKQMPLALYQIQTKFRDENRPRF-GLLRGREFVMLDGYSFAATRDQLDEQF 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
               +    I+K  G     V   +       S   
Sbjct: 175 DDQKSAYKRIFKRAGVTVHPVIADSGTMGGKNSTEF 210



 Score = 68.7 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 23/159 (14%), Positives = 52/159 (32%), Gaps = 8/159 (5%)

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL- 550
           + G I       ++         + K  PV++     G        + ++   +   W  
Sbjct: 407 EVGHIFKLGTYYTKTMGADFLDQNGKAKPVIMGSYGIGVTRMLSAAVEQHLTEHGVAWPK 466

Query: 551 --SPIQAIVT---TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPI 605
             +P    +           E A+++          +  D R E    K  +  +   PI
Sbjct: 467 EIAPFAIHIVQMKMNKEDQTELAEKLEKKFSEK-YDVLYDDRKERAGVKFADADLVGAPI 525

Query: 606 IIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            I  G K A++  + ++R       ++S+ +    + +E
Sbjct: 526 RITVGKK-AADGIVEVKRPIDDKATEMSIDELDKFVNQE 563


>gi|331087039|ref|ZP_08336114.1| prolyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA]
 gi|330409489|gb|EGG88932.1| prolyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA]
          Length = 564

 Score =  119 bits (297), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 39/186 (20%), Positives = 82/186 (44%), Gaps = 8/186 (4%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
            I +  SG+      G ++ + +   +R ++     +E+  P ++ + ++++SG  +++ 
Sbjct: 31  MIKKSSSGIYMIMPMGKRVLKKIEEIVREEMDAAGAQELLMPAMIPEEIYEKSGRREAFG 90

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
           +NMFA+K      +  + + L P +             SY++ P  L +  + +R+E   
Sbjct: 91  SNMFALKD-----RYQKNYVLGPTHEELFTMAAMMKGSSYKDFPYNLYQIQTKFRDETRP 145

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
             +GL+RVR F   DA+ F   E   +E   K+ +   +I +       +VK  T     
Sbjct: 146 R-YGLIRVREFIMKDAYSFDIDEAGLHESYMKMFHAYQNIMERCKLNYKIVKADTGAMGG 204

Query: 435 VGSDAL 440
             S+  
Sbjct: 205 SLSEEF 210



 Score = 89.5 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 31/154 (20%), Positives = 62/154 (40%), Gaps = 10/154 (6%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPI 553
           +           Y +  + K HPV +    FG +ER +  ++E          P  ++P 
Sbjct: 411 LGTKYAKTLGLEYQDVDN-KLHPVEMGCYGFG-LERCMAAIVEQHNDEAGIIWPASVAPF 468

Query: 554 QAIVTTITSSAVEYAQ---EIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           +  V  ++S   E  +   E+   LK   + +  D R E    K ++  +  IP  I  G
Sbjct: 469 EVAVVVVSSKDEEQMRIGSELYEALKKEGIDVLLDDRKERPGVKFKDMELIGIPYRITVG 528

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            +   E  +  R   +   ++++L + I ++ +E
Sbjct: 529 -RGIQEGKVEFRARTAAENREIALGEVIKLVKEE 561


>gi|311897171|dbj|BAJ29579.1| putative prolyl-tRNA synthetase [Kitasatospora setae KM-6054]
          Length = 586

 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 47/217 (21%), Positives = 88/217 (40%), Gaps = 12/217 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  +        +++   HR L R   +  +A     +        ++   +++ +R 
Sbjct: 3   WSQLYVPTLREDPADADAASHRLLVRAGYVRQLAAGHYSL---LPLAARVRARIVAVVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           +++    +E   P +    LW+++G W+S    MF +     T +     AL   +    
Sbjct: 60  EMERIGAQEFLLPALHPAELWRRTGRWESMGEEMFRL-----TDRKGAEQALGMTHEEV- 113

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
            A     L+SYR+LP    +F + +R+E      GL+RVR FT  D++ F   E      
Sbjct: 114 FAHLAEELRSYRQLPQTWYQFQTKFRDEARPR-SGLLRVREFTMKDSYSFDLDEAGMARS 172

Query: 405 LKIHNL-IISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            + H L  + I++  G     V+ S+      GS   
Sbjct: 173 FEAHRLAYLRIFERLGLPAFGVRASSGAMGGSGSVEF 209



 Score = 91.8 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 25/162 (15%), Positives = 58/162 (35%), Gaps = 10/162 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNL 546
           R  + G I Q+                 E+  P+M    +   +ER +  ++E +     
Sbjct: 423 RTIEVGHIFQLGRRYTEALGVAVAGPAGERVVPLMGSYGI--GVERLLAALVEAHHDERG 480

Query: 547 PLWLSPIQA------IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
             W + +        ++     +  E A+ +   L +  + +  D R E    K  +  +
Sbjct: 481 IRWPAAVAPFDLVLTVLPDRGGAVAEAAERLCGELGAAGVRVLLDDRAERPGVKFADAEL 540

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             +P  +  G +  +  +  +      +T+++ L  A+P L 
Sbjct: 541 IGVPWRLTLGARGLAAGTAELTARADGSTRELGLDAAVPELR 582


>gi|309776525|ref|ZP_07671506.1| phosphoribulokinase family protein [Erysipelotrichaceae bacterium
           3_1_53]
 gi|308915702|gb|EFP61461.1| phosphoribulokinase family protein [Erysipelotrichaceae bacterium
           3_1_53]
          Length = 541

 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 92/224 (41%), Gaps = 4/224 (1%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI-EII 62
            ++L   +G + +        ++ +++   L     AV ++GK+ DL+  V+  ++ + I
Sbjct: 1   MLELKLKNGELLHCEAGTYVHELLQTLP--LQAVVYAVTLDGKLHDLNYRVKRNAVLDFI 58

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
             +      +   S   +   AV+S++P+  V +   +  G Y + DK+      ++ +I
Sbjct: 59  YADSETGKLIYERSLNFLFIVAVRSLFPDAHVRMEHALSGGQYCEIDKQDYCKPQDVRKI 118

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E++M+E+IA      ++ +   +A+  F+      K  +L         ++Y    + D 
Sbjct: 119 ERRMKELIAAKEVIHRRVVPTVEAQAYFDRLGMKNKANLL-GCRKSATSSIYTLCGYEDY 177

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWN 226
             G  +  T  +  F       G +   ++     ++++     
Sbjct: 178 FYGIMLPDTSYLTHFSIRFYAPGIWLSANNGFHNQAKLFHVFQE 221


>gi|296122745|ref|YP_003630523.1| prolyl-tRNA synthetase [Planctomyces limnophilus DSM 3776]
 gi|296015085|gb|ADG68324.1| prolyl-tRNA synthetase [Planctomyces limnophilus DSM 3776]
          Length = 590

 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 39/221 (17%), Positives = 84/221 (38%), Gaps = 8/221 (3%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  +        ++E   H+ + R   +  +    +G   +   GW+  + + + +R 
Sbjct: 3   WSQSFIPTLKENPSDAEIPSHQLMLRAGYVRQL---MAGAYTYLPLGWRSIRKIEAIIRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P +    L++++G  +++   +                AL P +    
Sbjct: 60  EMDATGALEMLMPALQPIDLFERTGRKEAFGNVLINFNIR--RQNHQVHLALGPTHEEVV 117

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
             + +  + SYR+LP+ + +  + +RNE       L R   F   DA+ F +  E +   
Sbjct: 118 TDLMSRHISSYRQLPMTVYQIQTKFRNEERPRFGVL-RTSEFIMKDAYSFHSSVESLSET 176

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
             KI+     I+   G E + V+  + P     S      A
Sbjct: 177 YQKIYRAYCRIFARCGLEYLPVEAESGPIGGDASHEFMAPA 217



 Score = 74.4 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 23/140 (16%), Positives = 56/140 (40%), Gaps = 8/140 (5%)

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIE----NFKGNLPLWLSPIQAIVTTIT---SSA 564
           +  +    P+++     G + R +  M E    +    LPL ++P   +++TI       
Sbjct: 438 DDEAATRQPLIMGCYGIG-VNRILASMAETKFDDNGLVLPLSIAPYSVVISTIGVNDPEV 496

Query: 565 VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRF 624
            E   ++   L +  + +  D R++    K ++  +  IP+ ++ G K   E  + ++  
Sbjct: 497 DEVVNQLEKELTAAGVDLLIDDRDQRPGVKFKDADLIGIPLRVVIGGKGLKEGQVELKWR 556

Query: 625 GSTTTQKVSLLDAIPILTKE 644
                 K+ +  A   +  +
Sbjct: 557 HLPEATKIPVTGAAQAILDQ 576


>gi|256838580|ref|ZP_05544090.1| uridine kinase [Parabacteroides sp. D13]
 gi|262382948|ref|ZP_06076085.1| uridine kinase [Bacteroides sp. 2_1_33B]
 gi|256739499|gb|EEU52823.1| uridine kinase [Parabacteroides sp. D13]
 gi|262295826|gb|EEY83757.1| uridine kinase [Bacteroides sp. 2_1_33B]
          Length = 555

 Score =  118 bits (296), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 45/220 (20%), Positives = 86/220 (39%), Gaps = 3/220 (1%)

Query: 1   MPSDIKLTFPDGSI-KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGS 58
           M   I +   + +  K+ P+ ++  D+  ++   L  + +   +N K   L+    +   
Sbjct: 1   MSETITIYCKNNNTYKDVPIGSSLLDIYTAVGAPLRYRPMNAQVNNKTESLNFRCWQPKD 60

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           IE I       L     S  HI ++AV  IWP   + +   +  G+Y      +    + 
Sbjct: 61  IEFIDYTQLSGLRTYVRSLCHIFSKAVYDIWPTATLNLEHPVSKGYYCVIHNGKNIDLET 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           + +I+K+M E+I  D PFL + +    A  LF  +    K  ++E+       + Y    
Sbjct: 121 IEKIKKRMWELIDADLPFLHKSVRTVDAAVLFRERGMNDKARLIET-AGLPYTSYYELEG 179

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLS 218
           + +   G    STG ++ F     + G   R       + 
Sbjct: 180 YINFFYGCLTPSTGYIQLFDLEPYMDGVLLRIPKQTDPME 219


>gi|225867815|ref|YP_002743763.1| prolyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus]
 gi|259511619|sp|C0MFA1|SYP_STRS7 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|225701091|emb|CAW97925.1| prolyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus]
          Length = 618

 Score =  118 bits (296), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 77/192 (40%), Gaps = 10/192 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  ++    G+  +     +  +   + MR++
Sbjct: 4   SKMLIPTLREMPSDAQVISHALMVRAGYVRQVSA---GIYAYLPLAHRTIEKFKTIMRQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
                  E+  P +L   LW++SG +++Y  +++ +K      +D   F L P +     
Sbjct: 61  FDKIGAVEMLAPALLTADLWRESGRYETYGEDLYKLKN-----RDKSDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    +KSY++LP+ L +  S YR+E     +GL+R R F   D + F       +   
Sbjct: 116 TLVRDAVKSYKQLPLNLYQIQSKYRDEKRPR-NGLLRTREFIMKDGYSFHQSYDDLDVTY 174

Query: 406 KIHNLIISIYKD 417
             +         
Sbjct: 175 DAYRQAYEAIFT 186



 Score = 69.8 bits (169), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/180 (20%), Positives = 72/180 (40%), Gaps = 25/180 (13%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S   A  +   + +  P+++     G   R +  +IE        
Sbjct: 441 RGIEIGHIFKLGTRYSDSMAANILDENGRAVPIVMGCYGIGVS-RILSAVIEQHARLFVS 499

Query: 542 ----------FKGNLPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRN 588
                     +  N P  L+P    + T+      A +  +++   L +    + TD RN
Sbjct: 500 KTPKGDYRYAWGINFPKELAPFDVHLITVNVKDQEAQDLTEKVEASLMAKGYDVLTDDRN 559

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV---SLLDAIPILTKES 645
           E +  K  +  +  +PI +  G K A+E  + I+   +  + +V   SL++ + ILTK++
Sbjct: 560 ERVGSKFSDSDLIGLPIRVTIGKK-AAEGIVEIKIKATGDSIEVHADSLIETLDILTKDN 618


>gi|225871275|ref|YP_002747222.1| prolyl-tRNA synthetase [Streptococcus equi subsp. equi 4047]
 gi|254782916|sp|C0M9E6|SYP_STRE4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|225700679|emb|CAW95268.1| prolyl-tRNA synthetase [Streptococcus equi subsp. equi 4047]
          Length = 618

 Score =  118 bits (296), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 77/192 (40%), Gaps = 10/192 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  ++    G+  +     +  +   + MR++
Sbjct: 4   SKMLIPTLREMPSDAQVISHALMVRAGYVRQVSA---GIYAYLPLAHRTIEKFKTIMRQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
                  E+  P +L   LW++SG +++Y  +++ +K      +D   F L P +     
Sbjct: 61  FDKIGAVEMLAPALLTADLWRESGRYETYGEDLYKLKN-----RDKSDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    +KSY++LP+ L +  S YR+E     +GL+R R F   D + F       +   
Sbjct: 116 TLVRDAVKSYKQLPLNLYQIQSKYRDEKRPR-NGLLRTREFIMKDGYSFHQSYDDLDVTY 174

Query: 406 KIHNLIISIYKD 417
             +         
Sbjct: 175 DAYRQAYEAIFT 186



 Score = 68.3 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 37/180 (20%), Positives = 71/180 (39%), Gaps = 25/180 (13%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S   A  +   + +  P+++     G   R +  +IE        
Sbjct: 441 RGIEIGHIFKLGTRYSDSMAANILDENGRAVPIVMGCYGIGVS-RILSAVIEQHARLFVS 499

Query: 542 ----------FKGNLPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRN 588
                     +  N P  L+P    + T+      A +  + +   L +    + TD RN
Sbjct: 500 KTPKGDYRYAWGINFPKELAPFDVHLITVNVKDQEAQDLTERVEASLMAKGYDVLTDDRN 559

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV---SLLDAIPILTKES 645
           E +  K  +  +  +PI +  G K A+E  + I+   +  + +V   SL++ + ILTK++
Sbjct: 560 ERVGSKFSDSDLIGLPIRVTIGKK-AAEGIVEIKIKATGDSIEVHADSLIETLDILTKDN 618


>gi|86160363|ref|YP_467148.1| prolyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|114152165|sp|Q2IGK6|SYP1_ANADE RecName: Full=Prolyl-tRNA synthetase 1; AltName: Full=Proline--tRNA
           ligase 1; Short=ProRS 1
 gi|85776874|gb|ABC83711.1| prolyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 575

 Score =  118 bits (296), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 39/192 (20%), Positives = 77/192 (40%), Gaps = 10/192 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           TQ  +        +++   H+ L R   +  +   G+G+  +     +    + + +R +
Sbjct: 7   TQAFIPTLKEAPADAQVASHKLLVRAGFIRQL---GAGIYDYLPLAKRSLTKIEAIVREE 63

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E   P +    +W++SG W+    NMF +K      +    + L   +     
Sbjct: 64  MNAIGGQEFFLPALHPAEIWKESGRWEVMGDNMFRLKD-----RKGGDYGLGMTHEEIFT 118

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           A+    L+SYR+LP    +  + +R+EP     GL+RVR FT  DA+ F       ++  
Sbjct: 119 AIARDELRSYRQLPQVWYQIQTKFRDEPRPK-SGLLRVRQFTMKDAYSFDVDRAGLDKSY 177

Query: 406 KIHNLIISIYKD 417
           +           
Sbjct: 178 EDQRQAYEKIFT 189



 Score = 81.0 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 31/164 (18%), Positives = 62/164 (37%), Gaps = 8/164 (4%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE----NFKG 544
           +  + G I       S      V     K  P+++     G +ER +   IE    +   
Sbjct: 409 KALEVGHIFKLGTKYSESMKATVLDAGGKQVPIVMGSYGIG-VERILAAAIELHHDDNGI 467

Query: 545 NLPLWLSPIQAIVTTITSSAV--EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
             P+ ++P  A V T+       + A+E+   L    + +  D R+E    K ++  +  
Sbjct: 468 VFPMAIAPFHATVLTLGPEPELRKAAEEVVAALGKEGVEVLFDDRDERAGVKFKDADLLG 527

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           IPI +  G K  +  ++  +       + V L + +     E++
Sbjct: 528 IPIRVAVGKKGLAAGNVEWKLRRGGAVELVPLGE-VARKAAEAV 570


>gi|301307737|ref|ZP_07213694.1| phosphoribulokinase family protein [Bacteroides sp. 20_3]
 gi|300834411|gb|EFK65024.1| phosphoribulokinase family protein [Bacteroides sp. 20_3]
          Length = 555

 Score =  118 bits (296), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 45/220 (20%), Positives = 86/220 (39%), Gaps = 3/220 (1%)

Query: 1   MPSDIKLTFPDGSI-KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGS 58
           M   I +   + +  K+ P+ ++  D+  ++   L  + +   +N K   L+    +   
Sbjct: 1   MSETITIYCKNNNTYKDVPIGSSLLDIYTAVGAPLRYRPMNAQVNNKTESLNFRCWQPKD 60

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           IE I       L     S  HI ++AV  IWP   + +   +  G+Y      +    + 
Sbjct: 61  IEFIDYTQLSGLRTYVRSLCHIFSKAVYDIWPTATLNLEHPVSKGYYCVIHNGKNIDLET 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           + +I+K+M E+I  D PFL + +    A  LF  +    K  ++E+       + Y    
Sbjct: 121 IEKIKKRMWELIDADLPFLHKSVRTVDAAVLFRERGMNDKARLIET-AGLPYTSYYELEG 179

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLS 218
           + +   G    STG ++ F     + G   R       + 
Sbjct: 180 YINFFYGCLTPSTGYIQLFDLEPYMDGVLLRIPKQTDPME 219


>gi|325663512|ref|ZP_08151922.1| prolyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA]
 gi|325470411|gb|EGC73642.1| prolyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA]
          Length = 564

 Score =  118 bits (296), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 39/186 (20%), Positives = 82/186 (44%), Gaps = 8/186 (4%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
            I +  SG+      G ++ + +   +R ++     +E+  P ++ + ++++SG  +++ 
Sbjct: 31  MIKKSSSGIYMIMPMGKRVLKKIEEIVREEMDAAGAQELLMPAMIPEEIYEKSGRREAFG 90

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
           +NMFA+K      +  + + L P +             SY++ P  L +  + +R+E   
Sbjct: 91  SNMFALKD-----RYQKNYVLGPTHEELFTMAAMMKGSSYKDFPYNLYQIQTKFRDETRP 145

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
             +GL+RVR F   DA+ F   E   +E   K+ +   +I +       +VK  T     
Sbjct: 146 R-YGLIRVREFIMKDAYSFDIDEAGLHESYMKMFHAYQNIMERCKLNYKIVKADTGAMGG 204

Query: 435 VGSDAL 440
             S+  
Sbjct: 205 SLSEEF 210



 Score = 91.4 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 31/154 (20%), Positives = 62/154 (40%), Gaps = 10/154 (6%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPI 553
           +           Y +  + K HPV +    FG +ER +  ++E          P  ++P 
Sbjct: 411 LGTKYAKTLGLEYQDVDN-KLHPVEMGCYGFG-LERCMAAIVEQHNDEAGIIWPASVAPF 468

Query: 554 QAIVTTITSSAVEYAQ---EIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           +  V  ++S   E  +   E+   LK   + +  D R E    K ++  +  IP  I  G
Sbjct: 469 EVAVVVVSSKDEEQMRIGNELYEALKKEGIDVLLDDRKERPGVKFKDMELIGIPYRITVG 528

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            +   E  +  R   +   ++++L + I ++ +E
Sbjct: 529 -RGIQEGKVEFRARTAAENREIALDEVIKLVKEE 561


>gi|150009740|ref|YP_001304483.1| uridine kinase [Parabacteroides distasonis ATCC 8503]
 gi|255012969|ref|ZP_05285095.1| uridine kinase [Bacteroides sp. 2_1_7]
 gi|298374139|ref|ZP_06984097.1| phosphoribulokinase family protein [Bacteroides sp. 3_1_19]
 gi|149938164|gb|ABR44861.1| uridine kinase [Parabacteroides distasonis ATCC 8503]
 gi|298268507|gb|EFI10162.1| phosphoribulokinase family protein [Bacteroides sp. 3_1_19]
          Length = 555

 Score =  118 bits (296), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 45/220 (20%), Positives = 86/220 (39%), Gaps = 3/220 (1%)

Query: 1   MPSDIKLTFPDGSI-KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGS 58
           M   I +   + +  K+ P+ ++  D+  ++   L  + +   +N K   L+    +   
Sbjct: 1   MSETITIYCKNNNTYKDVPIGSSLLDIYTALGAPLRYRPMNAQVNNKTESLNFRCWQPKD 60

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           IE I       L     S  HI ++AV  IWP   + +   +  G+Y      +    + 
Sbjct: 61  IEFIDYTQLSGLRTYVRSLCHIFSKAVYDIWPTATLNLEHPVSKGYYCVIHNGKNIDLET 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           + +I+K+M E+I  D PFL + +    A  LF  +    K  ++E+       + Y    
Sbjct: 121 IERIKKRMWELIDADLPFLHKSVRTVDAAVLFRERGMNDKARLIET-AGLPYTSYYELEG 179

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLS 218
           + +   G    STG ++ F     + G   R       + 
Sbjct: 180 YINFFYGCLTPSTGYIQLFDLEPYMDGVLLRIPKQTDPME 219


>gi|327268678|ref|XP_003219123.1| PREDICTED: 39S ribosomal protein L39, mitochondrial-like [Anolis
           carolinensis]
          Length = 336

 Score =  118 bits (295), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 54/251 (21%), Positives = 95/251 (37%), Gaps = 29/251 (11%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPEDPRSLAV---IRHS 76
           +T    A  +S    KK+V   ++G++ D++ P+     I+ +T +D     V      S
Sbjct: 78  STPYSCAMHLSELHCKKSVLALVDGELWDMNKPLTNSCEIQFLTFKDEDPEEVNKAYWRS 137

Query: 77  CAHIMAEAVQSIWPEVQVAI------GPIIEDGFYYDFDK-----EQPFSSDELAQIEKK 125
           CA ++   ++  + E            P+I   F YD        +   + + L    K 
Sbjct: 138 CAMLLGCVLEQAFKEEYSTTLVRAPEVPVIAGAFCYDVILDSKLDDWKPTEESLRSFTKD 197

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAY-KVEILESIPAKENVTLYRQGEWFDLCR 184
           +  +I +D PF    +  + A E+ +  K     VE   S  ++  V L+R G + D+  
Sbjct: 198 IHRLIHQDLPFETLDVDAKVALEILQHNKYKRDMVEQKASQSSERIVKLHRCGNFVDISE 257

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GPH+  T     F    +V  A+    S   ++ R  G +             L+     
Sbjct: 258 GPHIPRTS----FCHQYEVTAAHNLQSSQSELIRRFQGLSLPVA---------LKLHHAV 304

Query: 245 DHRKLAREMDL 255
            HR   R   L
Sbjct: 305 WHRLRERSRKL 315


>gi|315500848|ref|YP_004079735.1| prolyl-tRNA synthetase [Micromonospora sp. L5]
 gi|315407467|gb|ADU05584.1| prolyl-tRNA synthetase [Micromonospora sp. L5]
          Length = 589

 Score =  118 bits (295), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 60/366 (16%), Positives = 113/366 (30%), Gaps = 37/366 (10%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   HR L R   +        G   W   G  +   + + +R ++     +E++ P 
Sbjct: 19  DAEVPSHRLLLRAGYVR---RAAPGGYTWLPLGKLVLDRITAIVRDEMTGIGDQEVHFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L    ++ SG W  Y  ++F +       +      L P +      +      SYR+ 
Sbjct: 76  LLPAEPYRTSGRWTEYGDDIFTL-----ADRKGAEHLLAPTHEELAALLVKDLFTSYRDF 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI-YKD 417
           PV L +  + +R+E      GL+R R F   DA+ F   E         H       +  
Sbjct: 131 PVTLFQIQTKFRDEARPR-AGLLRGREFLMKDAYSFDLDEAGLQAAYDRHRAAYERVFTR 189

Query: 418 FGFEKIMVKLSTRPEKRVGSDAL--------------WDDAENIMKGVLDTIKNSSQDRI 463
            G +   V   +       S+                           + T   ++ D  
Sbjct: 190 LGLDFTTVHAMSGAMGGSASEEFLAATPVGEDTFVGCTACDYAANTEAVVTRAPAAGDPD 249

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
                        P    +++ A  R+    T     +           + +E+  P++I
Sbjct: 250 AYPPAEVHDTPETPTIAALVELAEARELGGRTGWTAADTLKNVVLTVRRAGAEQGEPLVI 309

Query: 524 HRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIA--NLLKSHHLS 581
              + G  +R      E     +   L+P    V     +  E  +      +L  H + 
Sbjct: 310 --GLPG--DR------EVDLKRVEAVLAPATVAVFEDWDAHPELVRGYIGPQILAKHGIR 359

Query: 582 IETDFR 587
              D R
Sbjct: 360 YLVDPR 365



 Score = 81.8 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 58/167 (34%), Gaps = 10/167 (5%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
            I R  + G I Q+       F    +    +   P M    +   + R +  + E    
Sbjct: 418 TIRRGIEIGHIFQLGRRYTDAFAVDVLGPEGKPVRPTMGCYGI--GVSRAVAAVAEQHHD 475

Query: 545 N----LPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREH 598
           +     P  ++P    +        ++ A ++   L +  L +  D R   +   K  + 
Sbjct: 476 DRGLVWPAAVAPCDVHLIAAGKGPQLDAALDLGGRLAAAGLRVLVDDRTHVSAGVKFTDA 535

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
            +  IP  ++ G +  +E  + +R   +    ++ +   +  L  E+
Sbjct: 536 ELIGIPRAVVVGRR-LAEGYVELRDRATGERTELPVEAIVERLRDEA 581


>gi|75763967|ref|ZP_00743592.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar
          israelensis ATCC 35646]
 gi|74488542|gb|EAO52133.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar
          israelensis ATCC 35646]
          Length = 102

 Score =  118 bits (295), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 37/91 (40%), Positives = 56/91 (61%), Gaps = 1/91 (1%)

Query: 4  DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEII 62
           I++ FPDGS+K F    T  ++A SIS SL KKAVA  +N  + DL   + E   +EII
Sbjct: 5  MIEIKFPDGSVKEFVNGVTLEEIAGSISSSLKKKAVAGKVNDGLYDLRRNIEENAEVEII 64

Query: 63 TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQ 93
          T +    + + RHS AHI+A+AV+ ++ ++ 
Sbjct: 65 TIDSNEGVEIARHSAAHILAQAVKRLYGDIN 95


>gi|159039093|ref|YP_001538346.1| prolyl-tRNA synthetase [Salinispora arenicola CNS-205]
 gi|189083509|sp|A8LYE7|SYP_SALAI RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|157917928|gb|ABV99355.1| prolyl-tRNA synthetase [Salinispora arenicola CNS-205]
          Length = 584

 Score =  118 bits (295), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 40/203 (19%), Positives = 72/203 (35%), Gaps = 11/203 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   HR L R   L        G   W   G  +   +   +R ++     +E++ P 
Sbjct: 19  DAEVPSHRLLLRAGYLR---RAAPGGYTWLPLGKLVLDRVAEVIRTEMLAIGDQEVHFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L    ++ SG W  Y  ++  +       +      L P +      +      SYR+ 
Sbjct: 76  LLPAEPYRTSGRWTEYGDDLITLVD-----RRGAEHLLAPTHEEPAALLVKELFTSYRDF 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL-IISIYKD 417
           PV + +  + +R+E      GL+R R F   DA+ F   E         H      I+  
Sbjct: 131 PVGIFQIQTKFRDEARPR-AGLLRGREFLMKDAYSFDLDEAGLQAAYDRHRSAYQKIFAR 189

Query: 418 FGFEKIMVKLSTRPEKRVGSDAL 440
            G +  +V   +       S+  
Sbjct: 190 LGLDYAVVHAVSGAMGGSASEEF 212



 Score = 74.0 bits (180), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 28/166 (16%), Positives = 54/166 (32%), Gaps = 10/166 (6%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
            + R  + G I Q+       F    +    +   P M    +   + R + ++ E    
Sbjct: 418 TLRRGIEIGHIFQLGRRYTDAFTVDVLGPEGQSVRPTMGCYGI--GVSRAVAVIAEQHHD 475

Query: 545 N----LPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREH 598
                 P  ++P    +        VE A  + N L    L +  D R   +   K  + 
Sbjct: 476 ERGLVWPTEVAPCDVHLVAAGRGPQVETALGLGNRLAEAGLRVLVDDRGHVSAGVKFTDA 535

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            +  IP  ++ G +  ++    +R   S     V +   +  L  E
Sbjct: 536 ELVGIPRTVVVGRR-LADGYAEVRDRPSGKRADVRVDALVEHLVNE 580


>gi|312880609|ref|ZP_07740409.1| phosphoribulokinase/uridine kinase [Aminomonas paucivorans DSM
           12260]
 gi|310783900|gb|EFQ24298.1| phosphoribulokinase/uridine kinase [Aminomonas paucivorans DSM
           12260]
          Length = 547

 Score =  118 bits (295), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 47/196 (23%), Positives = 87/196 (44%), Gaps = 5/196 (2%)

Query: 11  DGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRS 69
           DG ++      TGS+V        A   VA  +N  +  L   V  + S+E +       
Sbjct: 10  DGKLR-CETPLTGSEVLSLSGYGGANNVVAWRVNRNLRPLGWVVDEDASVEFVDTGSFEG 68

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           + V R + + ++ +A + +  +  V I   + DG+Y +     P + +++  I++ M  +
Sbjct: 69  MEVYRRTLSFLLVQASKKVLGQ-DVTIRHSMSDGYYCELSGG-PATEEQVGAIKQGMAHL 126

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
           + ++ P  ++ L  +KAR +FE +    K  +L+       V +YR  + +     P   
Sbjct: 127 VDQNIPIHREVLPLDKARRIFERQGNYDKARLLQWTALDPTV-VYRCADTYGYFYAPLAS 185

Query: 190 STGQVKKFFKLMKVAG 205
           STGQVK F  L    G
Sbjct: 186 STGQVKVFDLLRYPPG 201


>gi|220919170|ref|YP_002494474.1| prolyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
 gi|254782880|sp|B8J9M0|SYP_ANAD2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|219957024|gb|ACL67408.1| prolyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 574

 Score =  118 bits (295), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 10/163 (6%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
            H+ L R   +  +   G+G+  +     +    + + +R ++     +E   P +    
Sbjct: 25  SHKLLVRAGFIRQL---GAGIYDYLPLAKRSLAKVEAIVREEMDAIGGQEFYLPALHPAE 81

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           +W++SG WD    NMF +K      +    + L   +     AV    L+SYR+LP    
Sbjct: 82  IWKESGRWDVMGDNMFRLKD-----RKGGDYCLGMTHEEIFTAVARDELRSYRQLPQVWY 136

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           +  + +R+EP     GL+RVR FT  DA+ F       +   +
Sbjct: 137 QIQTKFRDEPRPK-SGLLRVRQFTMKDAYSFDVDRAGLDRSYE 178



 Score = 82.1 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 30/165 (18%), Positives = 65/165 (39%), Gaps = 10/165 (6%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE----NFK 543
           +  + G I  +         A  +++   K  P+++     G +ER +   IE    +  
Sbjct: 409 KALEIGHIFKLGTKYSESMKATVLDAEG-KQVPIVMGSYGIG-VERILAAAIELHHDDNG 466

Query: 544 GNLPLWLSPIQAIVTTITSSAV--EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
              P+ ++P  A V T+       + A+E+   L    + +  D R+E    K ++  + 
Sbjct: 467 IVFPMAIAPFHATVLTLGPEPELRKAAEEVVAALGKEGVEVLFDDRDERAGVKFKDADLL 526

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
            IPI I  G K  +  ++  +       + V + + +     E++
Sbjct: 527 GIPIRIAVGKKGLAAGNVEWKLRKGGAVELVPVGE-VARKAAEAV 570


>gi|312143861|ref|YP_003995307.1| AAA ATPase [Halanaerobium sp. 'sapolanicus']
 gi|311904512|gb|ADQ14953.1| AAA ATPase [Halanaerobium sp. 'sapolanicus']
          Length = 549

 Score =  118 bits (295), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 53/268 (19%), Positives = 107/268 (39%), Gaps = 18/268 (6%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           D+K+   DG            D+  + +    K  +AV I  ++ DL+  +  E  I+ +
Sbjct: 2   DVKV---DGEELKIFDTTKIEDIIAASNIENPKDIMAVIIENEIYDLNHKIEKEVEIKTV 58

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           T        + R S   ++A+AV  I+PE+ + IG  I +G Y +   +   S  ++ +I
Sbjct: 59  TINTEIGNRIYRRSLYFVLAKAVYEIFPEIVLKIGISISNGIYCELKNKSCLSKADINKI 118

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
             KM EII+ D    +  LS ++  ++ E +  +++ E++     K+  T+Y    ++D 
Sbjct: 119 NSKMLEIISADLKIKRHKLSQKEVLKIIEEENCSFRRELILE-QDKDFYTIYELDGYYDY 177

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYW-------------RGDSNRPMLSRIYGTAWNTQQ 229
                V ST  + +F   +++ G                  +  +     +         
Sbjct: 178 FYYNMVPSTSYLSEFDLHLRIPGFVLLFPKFFGKKKVPVFKEQPKLAKIFLEYAELGEIL 237

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFH 257
            ++         +   H +L R  + FH
Sbjct: 238 AVSNVHDLNTNIKNNKHNELIRIAEAFH 265


>gi|329117585|ref|ZP_08246302.1| proline--tRNA ligase [Streptococcus parauberis NCFD 2020]
 gi|326907990|gb|EGE54904.1| proline--tRNA ligase [Streptococcus parauberis NCFD 2020]
          Length = 618

 Score =  117 bits (294), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 80/192 (41%), Gaps = 10/192 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  ++    G+  +     +  +   + MR++
Sbjct: 4   SKMLIPTLREMPSDAQVISHALMVRAGYVRQVSA---GIYAYLPLANRTIEKFKTIMRQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
                  E+ +P +L   LW++SG +++Y  +++ +K      +D   F L P +     
Sbjct: 61  FDKIGAVEMLSPALLTADLWRESGRYETYGDDLYKLKN-----RDQSDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    +KSY++LP+ L +  S YR+E     +GL+R R F   D + F    +  +   
Sbjct: 116 TLVRDAVKSYKQLPLNLYQIQSKYRDEKRPR-NGLLRTREFIMKDGYSFHPDYEDLDIAY 174

Query: 406 KIHNLIISIYKD 417
           + +         
Sbjct: 175 EDYRRAYEAIFT 186



 Score = 64.0 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 37/160 (23%), Positives = 64/160 (40%), Gaps = 27/160 (16%)

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN-----------------FKGNLPLWLSP 552
            +   + +  P+++     G   R +  +IE                  +  N P  L+P
Sbjct: 462 TILDENGRAVPIVMGCYGIGVS-RILSAVIEQHARLFVSKTPKGDYRFAWGINFPKELAP 520

Query: 553 IQAIVTTITSSAVEYAQEIANL----LKSHHLSIETDFRNETINYKIREHSIKKIPIIII 608
               + T+ +   E AQE+ N     L +    + TD RNE +  K  +  +  +PI + 
Sbjct: 521 FDVHLITVNTKDQE-AQELTNRIETDLMAKGYEVLTDDRNERVGSKFSDSDLIGLPIRVT 579

Query: 609 CGDKEASERSIGIRRFGST---TTQKVSLLDAIPILTKES 645
            G K ASE  + I+   S         +L + + ILTKE+
Sbjct: 580 VGKK-ASEGIVEIKIKSSGASIEVNAENLTETLEILTKEN 618


>gi|237751610|ref|ZP_04582090.1| prolyl-tRNA synthetase [Helicobacter bilis ATCC 43879]
 gi|229372976|gb|EEO23367.1| prolyl-tRNA synthetase [Helicobacter bilis ATCC 43879]
          Length = 575

 Score =  117 bits (294), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 50/226 (22%), Positives = 89/226 (39%), Gaps = 12/226 (5%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           + H  L R      I + GSG+  +      +   + + +R ++      EI    +   
Sbjct: 21  KSHIYLLRAGY---IHQIGSGIYNFLPLAQIVMDKIKTIVREEMNRAGANEITMGFLTPT 77

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW+QSG ++ Y       + A  T K   +F L P +      +    +KSY++LP+ L
Sbjct: 78  SLWEQSGRYEKYS------ELALFTDKKGASFVLGPTHEECVTEIAKTYIKSYKQLPLNL 131

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFE 421
            +    +R+E      GL+R R F   DA+ F    E +  E + + +  + I+   G +
Sbjct: 132 YQIHLKFRDELRPRF-GLLRAREFVMKDAYSFHDSLESLNKEFINMRDTYVRIFSRLGLD 190

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGV 467
             +V+  +      GS      AE     ++   K      I   V
Sbjct: 191 FRIVEADSGAIGGSGSREFMVLAECGEDTIVTCAKCDYASNIEAAV 236



 Score = 64.4 bits (155), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 19/127 (14%), Positives = 43/127 (33%), Gaps = 6/127 (4%)

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLW--LSPIQAIVTTITSSAVE---YAQEIANL 574
           P  +     G       I+ +       +W  ++P +  +        E   +A  +   
Sbjct: 446 PFTMGCYGLGVSRLISAILEQKADEKGCVWGAVAPFKLDIIISNMKNEEEVLFATNLYTQ 505

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           L+   + +  D RNE    KI +  +      +I G +  +E  + + +       + S 
Sbjct: 506 LQEKGIEVILDDRNERFGSKIADFELIGFEYALIVGKR-LAENKLELIKRDGLIRTEYSS 564

Query: 635 LDAIPIL 641
            + +  L
Sbjct: 565 ANILESL 571


>gi|146319615|ref|YP_001199327.1| prolyl-tRNA synthetase [Streptococcus suis 05ZYH33]
 gi|146321813|ref|YP_001201524.1| prolyl-tRNA synthetase [Streptococcus suis 98HAH33]
 gi|253752613|ref|YP_003025754.1| prolyl-tRNA synthetase [Streptococcus suis SC84]
 gi|253754439|ref|YP_003027580.1| prolyl-tRNA synthetase [Streptococcus suis P1/7]
 gi|253756372|ref|YP_003029512.1| prolyl-tRNA synthetase [Streptococcus suis BM407]
 gi|166980162|sp|A4W435|SYP_STRS2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|166980163|sp|A4VXT8|SYP_STRSY RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|145690421|gb|ABP90927.1| Prolyl-tRNA synthetase [Streptococcus suis 05ZYH33]
 gi|145692619|gb|ABP93124.1| Prolyl-tRNA synthetase [Streptococcus suis 98HAH33]
 gi|251816902|emb|CAZ52551.1| prolyl-tRNA synthetase [Streptococcus suis SC84]
 gi|251818836|emb|CAZ56679.1| prolyl-tRNA synthetase [Streptococcus suis BM407]
 gi|251820685|emb|CAR47447.1| prolyl-tRNA synthetase [Streptococcus suis P1/7]
 gi|292559230|gb|ADE32231.1| Prolyl-tRNA synthetase [Streptococcus suis GZ1]
          Length = 620

 Score =  117 bits (294), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 42/253 (16%), Positives = 96/253 (37%), Gaps = 16/253 (6%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++    H  + R   +  I+    G+  +     ++ +   + MR +
Sbjct: 4   SKMIIPTLREMPSDASVISHALMLRAGYVRQISA---GIYSYLPLANRVIEKAKNIMREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
               D  E   P +L   +W++SG +++Y  +++ +K      ++   F L P +     
Sbjct: 61  FDKIDAIEFLAPALLSADIWRESGRYETYGDDLYKLKN-----REGSDFILGPTHEETVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    ++SY++LP+ + +    YR+E     +GL+R R F   D + F    +  ++  
Sbjct: 116 LLARDAVQSYKQLPLNIYQIQPKYRDEKRPR-NGLLRGREFIMKDGYSFHASYESLDQTY 174

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD-----ALWDDAENIMKGVLDTIKNSSQ 460
             +             +    +        G D     A+  D  ++ + V+     +S 
Sbjct: 175 DDYKAAYEAIFTRAGLEFKAIIGDGGAMG-GKDSQEFMAITPDRTDLDRWVVLDKSVASF 233

Query: 461 DRINTGVLLGEGA 473
           + I   VL    A
Sbjct: 234 EEIPEDVLEAFKA 246



 Score = 72.9 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/179 (20%), Positives = 69/179 (38%), Gaps = 23/179 (12%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S      +   + +  P+++     G       ++ ++       
Sbjct: 442 RGIEIGHIFKLGTRYSDSMNANILDENGRSMPIIMGCYGIGVSRLLSAVLEQHARLFVNK 501

Query: 542 ---------FKGNLPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNE 589
                    +  N P  L+P    +  +     +A+E  Q I   L      + TD RNE
Sbjct: 502 TPKGEYRYAWGINFPKELAPFDVHLIPVNVKDEAAMELTQSIEASLVGAGYEVLTDDRNE 561

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV---SLLDAIPILTKES 645
            +  K  +  +  +PI +  G K A++  + ++  G+  T +V    LL+ + ILTKE+
Sbjct: 562 RVGVKFSDSDLIGLPIRVTVGKK-AADGIVEVKIKGTGDTVEVHVDQLLETLQILTKEN 619


>gi|154148423|ref|YP_001406459.1| prolyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381]
 gi|166980113|sp|A7I1R8|SYP_CAMHC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|153804432|gb|ABS51439.1| prolyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381]
          Length = 569

 Score =  117 bits (294), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 47/250 (18%), Positives = 93/250 (37%), Gaps = 11/250 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++          +++    H  L R      I + GSG+  +   G  + + + + ++ 
Sbjct: 3   FSKFFAPTLKEAPKDAILPSHVFLIRAG---FIEQLGSGLYNFLPLGEMVIEKIKAVIKD 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      ++N   V     WQ+SG ++ Y   +  +K   +       F L P N    
Sbjct: 60  EMDKTGALQVNFSFVTPSEFWQESGRYNVYGKELLRIKDRKENG-----FVLSPTNEESS 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT-KEQMFNE 403
           V +  + + SY++LP+ + +  + +R+E      GL+R R F   D + F    E +  E
Sbjct: 115 VKMIANKITSYKQLPIHIYQINTKFRDEARPRF-GLLRGREFIMKDGYSFHANMEDLKRE 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +     +I+   G     V+  +      GS      A+N    +L          I
Sbjct: 174 FDVMEKTYTNIFSRLGLNFRAVEADSGAIGGSGSKEFMVLAQNGEDDILVCESCKYAANI 233

Query: 464 NTGVLLGEGA 473
              V +   A
Sbjct: 234 EAAVRVKREA 243



 Score = 71.4 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 29/174 (16%), Positives = 60/174 (34%), Gaps = 15/174 (8%)

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           G K +      +G        Q+        NA +++ +  K  P  +     G   R +
Sbjct: 400 GAKLDIKKGIEVGH-----IFQLGQKYSKAMNAIFLDENG-KAVPFFMGCYGIGVS-RLL 452

Query: 536 GIMIE-NFKGNLPLW---LSPIQAIVTTITSSAVE---YAQEIANLLKSHHLSIETDFRN 588
            +MIE        +W    +P +  +    S   +   +A ++    K+  +S   D R 
Sbjct: 453 AVMIEAGHDEKGCIWNTQTAPFKLEIIISNSKDEDASNFAIQLYEKCKNAGISTLLDDRK 512

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           E    K+ +  +   P  ++ G K   + ++ +        + VS  +    L 
Sbjct: 513 ERFGVKMNDFELIGFPFAVLVG-KGLKDGNVELIERKGLNKKIVSSGEIFETLK 565


>gi|89898569|ref|YP_515679.1| prolyl-tRNA synthetase [Chlamydophila felis Fe/C-56]
 gi|114152181|sp|Q253K4|SYP_CHLFF RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|89331941|dbj|BAE81534.1| prolyl tRNA synthetase [Chlamydophila felis Fe/C-56]
          Length = 577

 Score =  117 bits (294), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 40/218 (18%), Positives = 90/218 (41%), Gaps = 9/218 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q          +++    +  L +   +F  A+   GV  +    W++   ++  +R 
Sbjct: 3   TSQLFYKTSKNANKDAAVLSYELLEKAGYIFKTAK---GVYTYTPLFWRVALKMMDIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +E+  P +    LWQ++G W+++R+        D   ++ +   L P +    
Sbjct: 60  ELNAIGGQELMLPILHPAELWQKTGRWEAFRSEGLLYTLTD---REDKELCLAPTHEEVV 116

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNE 403
               +  L   ++LP+ L +  + +R+E      GLMR R F  +D++ F  + EQM  +
Sbjct: 117 TMFVSQWLSGRKQLPIHLYQIATKFRDEIRPRF-GLMRAREFLMEDSYTFSDSPEQMNEQ 175

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALW 441
             K+      I+     + ++V+       +  S+   
Sbjct: 176 YDKLRRAYQKIFDRLEIKYVIVEADGGKIGKGKSEEFH 213



 Score = 67.9 bits (164), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 58/147 (39%), Gaps = 9/147 (6%)

Query: 500 FNLPSRF-NAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN----LPLWLSPI 553
           FNL +R+   F V   +E+          +G  I R +   +E    +     P  ++P 
Sbjct: 415 FNLGTRYTECFDVGFQNEQGEQQTCWMGTYGIGIGRTLAACVEQLADDRGIVWPKAIAPF 474

Query: 554 QAIVTTITSSAV--EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
              +      +   E A++I   L++   +   D RNE + +K+++  +  IP  +I G 
Sbjct: 475 DISILYNGGDSASQEAAEKIYTELQNSGYAPLLDDRNERLGFKLKDSDLIGIPYKLILGK 534

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAI 638
              +  ++ I    S     V   D +
Sbjct: 535 TFLNSGTLEIESR-SGEKFSVQPKDFV 560


>gi|302864555|ref|YP_003833192.1| prolyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029]
 gi|302567414|gb|ADL43616.1| prolyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029]
          Length = 589

 Score =  117 bits (294), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 40/203 (19%), Positives = 72/203 (35%), Gaps = 11/203 (5%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   HR L R   +        G   W   G  +   + + +R ++     +E++ P 
Sbjct: 19  DAEVPSHRLLLRAGYVR---RAAPGGYTWLPLGKLVLDRITAIVRDEMTGIGDQEVHFPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L    ++ SG W  Y  ++F +       +      L P +      +      SYR+ 
Sbjct: 76  LLPAEPYRTSGRWTEYGDDIFTL-----ADRKGAEHLLAPTHEELAALLVKDLFTSYRDF 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI-YKD 417
           PV L +  + +R+E      GL+R R F   DA+ F   E         H       +  
Sbjct: 131 PVTLFQIQTKFRDEARPR-AGLLRGREFLMKDAYSFDLDEAGLQAAYDRHRAAYERVFTR 189

Query: 418 FGFEKIMVKLSTRPEKRVGSDAL 440
            G +   V   +       S+  
Sbjct: 190 LGLDFTTVHAMSGAMGGSASEEF 212



 Score = 81.8 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 58/167 (34%), Gaps = 10/167 (5%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
            I R  + G I Q+       F    +    +   P M    +   + R +  + E    
Sbjct: 418 TIRRGIEIGHIFQLGRRYTDAFAVDVLGPEGKPVRPTMGCYGI--GVSRAVAAVAEQHHD 475

Query: 545 N----LPLWLSPIQAIVTTITSS-AVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREH 598
           +     P  ++P    +        ++ A ++   L +  L +  D R   +   K  + 
Sbjct: 476 DRGLVWPAAVAPCDVHLIAAGKGPQLDAALDLGGRLAAAGLRVLVDDRTHVSAGVKFTDA 535

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
            +  IP  ++ G +  +E  + +R   +    ++ +   +  L  E+
Sbjct: 536 ELIGIPRAVVVGRR-LAEGYVELRDRATGERTELPVEAIVERLRDEA 581


>gi|224044294|ref|XP_002187025.1| PREDICTED: mitochondrial ribosomal protein L39 [Taeniopygia
           guttata]
          Length = 337

 Score =  117 bits (294), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 55/253 (21%), Positives = 106/253 (41%), Gaps = 33/253 (13%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPEDPRSLAV---IRHS 76
           +T  + A  +S    K +V  +++G++ D+  P+ +   I+ +T +D     V      S
Sbjct: 72  STPYNCAMHLSEWHCKNSVLASVDGEIWDMYRPLTKSCEIQFLTFKDEDPEEVNKAYWRS 131

Query: 77  CAHIMAEAVQSIWPE------VQVAIGPIIEDGFYYDF-----DKEQPFSSDELAQIEKK 125
           CA IMA  ++  + +      V+    P+I   F  D        +   ++D    + + 
Sbjct: 132 CAMIMACVLERAFKDEYSVNLVKTPEVPVISGAFCCDVVLDNKLNDWKPTNDNFCSLTRD 191

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPA---KENVTLYRQGEWFDL 182
            +++I +D PF   ++  + ARE+   +   YK+E++E   A   +  V LYR G++ D+
Sbjct: 192 AKKLIHQDLPFETLHVEAKVAREM--FQHNVYKMEMIERKAAQNMEGIVPLYRFGDFVDV 249

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
             GPH+  T     F    ++  A+        ++ R  G +             L+   
Sbjct: 250 SEGPHIPRTS----FCFQYEITAAHNLQTDQSELIRRFQGVSLPVH---------LKAHH 296

Query: 243 KRDHRKLAREMDL 255
              H+ L R   L
Sbjct: 297 SVWHKLLERSKRL 309


>gi|302873591|ref|YP_003842224.1| putative threonyl-tRNA synthetase/uridine kinase [Clostridium
           cellulovorans 743B]
 gi|307688228|ref|ZP_07630674.1| putative threonyl-tRNA synthetase/uridine kinase [Clostridium
           cellulovorans 743B]
 gi|302576448|gb|ADL50460.1| putative threonyl-tRNA synthetase/uridine kinase [Clostridium
           cellulovorans 743B]
          Length = 548

 Score =  117 bits (294), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 47/205 (22%), Positives = 94/205 (45%), Gaps = 4/205 (1%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            IK+   +G   +     +  ++A++    L    V   +NG    L   +  +  I +I
Sbjct: 1   MIKINL-NGKTIDIEAGKSVLEIAKANGV-LGDFDVLALVNGNTVALETIIEKDSEISLI 58

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
              D +       +   ++ +A+  I+P  +V +   +  G + +  K+ P + +++ +I
Sbjct: 59  NYTDIKGHRAYVRTLQFVLIKAINDIFPTARVTLEHSLGKGIFGEIKKDTPLNEEDILKI 118

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           +K+MQE+I +D    K  +  ++A E+FE      K+++LE I  KE +TL+     +D 
Sbjct: 119 KKRMQELIDKDIVVNKYKVPKKRAIEIFEGYGYEDKIKLLEYIT-KEELTLHEIDGQYDY 177

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAY 207
             G  V +TG +K F   +   G  
Sbjct: 178 FFGDLVSTTGMLKTFDLKLYDPGFI 202


>gi|197124440|ref|YP_002136391.1| prolyl-tRNA synthetase [Anaeromyxobacter sp. K]
 gi|226731425|sp|B4UGI0|SYP_ANASK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|196174289|gb|ACG75262.1| prolyl-tRNA synthetase [Anaeromyxobacter sp. K]
          Length = 574

 Score =  117 bits (294), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 10/163 (6%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
            H+ L R   +  +   G+G+  +     +    + + +R ++     +E   P +    
Sbjct: 25  SHKLLVRAGFIRQL---GAGIYDYLPLAKRSLAKVEAIVREEMDAIGGQEFYLPALHPAE 81

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           +W++SG WD    NMF +K      +    + L   +     AV    L+SYR+LP    
Sbjct: 82  IWKESGRWDVMGDNMFRLKD-----RKGGDYCLGMTHEEIFTAVARDELRSYRQLPQVWY 136

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           +  + +R+EP     GL+RVR FT  DA+ F       +   +
Sbjct: 137 QIQTKFRDEPRPK-SGLLRVRQFTMKDAYSFDVDRAGLDRSYE 178



 Score = 81.8 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 30/165 (18%), Positives = 65/165 (39%), Gaps = 10/165 (6%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE----NFK 543
           +  + G I  +         A  +++   K  P+++     G +ER +   IE    +  
Sbjct: 409 KALEIGHIFKLGTKYSESMKATVLDAEG-KQVPIVMGSYGIG-VERILAAAIELHHDDNG 466

Query: 544 GNLPLWLSPIQAIVTTITSSAV--EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
              P+ ++P  A V T+       + A+E+   L    + +  D R+E    K ++  + 
Sbjct: 467 IVFPMAIAPFHATVLTLGPEPELRKAAEEVVAALGKEGVEVLFDDRDERAGVKFKDADLL 526

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
            IPI I  G K  +  ++  +       + V + + +     E++
Sbjct: 527 GIPIRIAVGKKGLAAGNVEWKLRKGGAVELVPVGE-VARKAAEAV 570


>gi|149193855|ref|ZP_01870953.1| prolyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
 gi|149135808|gb|EDM24286.1| prolyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
          Length = 574

 Score =  117 bits (294), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 40/224 (17%), Positives = 84/224 (37%), Gaps = 11/224 (4%)

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
              H  L R   +  +A    G+  +   G  +   +   +++++ +   +E+    +  
Sbjct: 20  TPSHIYLIRGGYIKQVAA---GIYDFAPLGKIVLDNIRDIIKKEMDNSGAQEVMLSFITP 76

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             LW+++G    Y   +  ++      +    F L P N    V +    +KSY++LP+ 
Sbjct: 77  YELWEETGRAKKYGDELLRIED-----RKGNKFVLSPTNEESIVDLVRSYVKSYKQLPIN 131

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH-NLIISIYKDFGF 420
           L +    +R+E      GL+R R F   DA+ F   E+  +    +       I+   G 
Sbjct: 132 LYQINLKFRDEARPRF-GLLRGREFIMKDAYSFHKDEEDLDREFNLMEETYKKIFSKMGL 190

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
           +  +V+  +      GS      A      ++   + +    I 
Sbjct: 191 DFRVVEADSGAIGGSGSKEFMVLANTGEDDIVVCSECNYAANIE 234



 Score = 86.0 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 41/181 (22%), Positives = 66/181 (36%), Gaps = 12/181 (6%)

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
            PK    LK   G +      ++        NA +++ +  K  P ++     G   R I
Sbjct: 399 CPKCGKPLKITKGIEV-GHIFKLGDVYSKPMNATFLDENG-KAKPFIMGCYGIGVS-RLI 455

Query: 536 GIMIE-NFKGNLPLWLSPIQAIVT------TITSSAVEYAQEIANLLKSHHLSIETDFRN 588
              IE N      +W   I   V           + V++A+ +   LKS ++ +  D R 
Sbjct: 456 AAAIEQNHDDKGIIWPKEIAPFVVDIIIGDVKKENQVKFAENLYEKLKSENIKVLLDDRK 515

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
           E    KI +  +   P  +I G K   +  + IR   S    +V   +    L KE L  
Sbjct: 516 ERFGVKINDFELLGFPYAVIVGKK-LKDGIVEIRDRRSDEKIEVKSDEVFDFL-KEKLKK 573

Query: 649 D 649
           D
Sbjct: 574 D 574


>gi|77405643|ref|ZP_00782731.1| prolyl-tRNA synthetase [Streptococcus agalactiae H36B]
 gi|161486742|ref|YP_330466.2| prolyl-tRNA synthetase [Streptococcus agalactiae A909]
 gi|114152259|sp|Q3JZ37|SYP_STRA1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|77175716|gb|EAO78497.1| prolyl-tRNA synthetase [Streptococcus agalactiae H36B]
          Length = 617

 Score =  117 bits (294), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 80/192 (41%), Gaps = 10/192 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  ++    G+  +     +  +   + MR++
Sbjct: 4   SKMLIPTLREMPSDAQVISHALMVRAGYVRQVSA---GIYAYLPLANRTIEKFKTIMRQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +     E+  P +L   LW++SG +++Y  +++ +K      +D   F L P +     
Sbjct: 61  FEKIGAVEMLAPALLTADLWRESGRYETYGEDLYKLKN-----RDQSDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    +KSY++LP+ L +  S YR+E     +GL+R R F   D + F    +  +   
Sbjct: 116 TLVRDAVKSYKQLPLNLYQIQSKYRDEKRPR-NGLLRTREFIMKDGYSFHKDYEDLDVTY 174

Query: 406 KIHNLIISIYKD 417
           + +         
Sbjct: 175 EDYRKAYEAIFT 186



 Score = 66.7 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/173 (19%), Positives = 63/173 (36%), Gaps = 22/173 (12%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S      +   + + +P+++     G   R +  +IE        
Sbjct: 441 RGIEIGHIFKLGTRYSDSMGANILDENGRSNPIVMGCYGIGVS-RILSAVIEQHARLFVN 499

Query: 542 ----------FKGNLPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRN 588
                     +  N P  L+P    + T+      + +  ++I   L      + TD RN
Sbjct: 500 KTPKGAYRFAWGINFPEELAPFDVHLITVNVKDQESQDLTEKIEADLMLKGYEVLTDDRN 559

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           E +  K  +  +  +PI +  G K ASE  + ++   S  T +V   + I  L
Sbjct: 560 ERVGSKFSDSDLIGLPIRVTVGKK-ASEGIVEVKIKASGDTIEVHADNLIETL 611


>gi|325268408|ref|ZP_08135040.1| phosphoribulokinase [Prevotella multiformis DSM 16608]
 gi|324989262|gb|EGC21213.1| phosphoribulokinase [Prevotella multiformis DSM 16608]
          Length = 519

 Score =  117 bits (294), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 42/202 (20%), Positives = 78/202 (38%), Gaps = 2/202 (0%)

Query: 39  VAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIG 97
           V+  +N KV  L   V     +E +    P  +     S   ++ +AV  ++P   V I 
Sbjct: 6   VSAKVNNKVEGLHYRVYHNKDVEYLDLHAPSGIRTYTRSLFLVLCKAVHDLYPGSSVVID 65

Query: 98  PIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAY 157
             + +G+Y +       + D++ +I  +MQEII    P  +   + E+A E+F    +  
Sbjct: 66  IPVSNGYYCNLKLGHAVTPDDVRRIRTRMQEIIDARLPIQRFETTTEEAVEMFNRLGDGQ 125

Query: 158 KVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPML 217
           K ++L S         Y   ++ D   G  +  TGQ+  F       G   R  S +   
Sbjct: 126 KAKLLRS-SGTLYSVYYVLDDYKDYYYGSMLTDTGQIHLFGLEPYFDGVLLRIPSAQDPS 184

Query: 218 SRIYGTAWNTQQELTQYLYFLE 239
                   +   E+ +  +  +
Sbjct: 185 RLGELIRQDKMFEVFKEHHRWQ 206


>gi|319745866|gb|EFV98156.1| proline--tRNA ligase [Streptococcus agalactiae ATCC 13813]
          Length = 617

 Score =  117 bits (294), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 80/192 (41%), Gaps = 10/192 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  ++    G+  +     +  +   + MR++
Sbjct: 4   SKMLIPTLREMPSDAQVISHALMVRAGYVRQVSA---GIYAYLPLANRTIEKFKTIMRQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +     E+  P +L   LW++SG +++Y  +++ +K      +D   F L P +     
Sbjct: 61  FEKIGAVEMLAPALLTADLWRESGRYETYGEDLYKLKN-----RDQSDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    +KSY++LP+ L +  S YR+E     +GL+R R F   D + F    +  +   
Sbjct: 116 TLVRDAVKSYKQLPLNLYQIQSKYRDEKRPR-NGLLRTREFIMKDGYSFHKDYEDLDVTY 174

Query: 406 KIHNLIISIYKD 417
           + +         
Sbjct: 175 EDYRKAYEAIFT 186



 Score = 66.7 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/173 (19%), Positives = 63/173 (36%), Gaps = 22/173 (12%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S      +   + + +P+++     G   R +  +IE        
Sbjct: 441 RGIEIGHIFKLGTRYSDSMGANILDENGRSNPIVMGCYGIGVS-RILSAVIEQHARLFVN 499

Query: 542 ----------FKGNLPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRN 588
                     +  N P  L+P    + T+      + +  ++I   L      + TD RN
Sbjct: 500 KTPKGAYRFAWGINFPEELAPFDVHLITVNVKDQESQDLTEKIEADLMLKGYEVLTDDRN 559

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           E +  K  +  +  +PI +  G K ASE  + ++   S  T +V   + I  L
Sbjct: 560 ERVGSKFSDSDLIGLPIRVTVGKK-ASEGIVEVKIKASGDTIEVHADNLIETL 611


>gi|167752362|ref|ZP_02424489.1| hypothetical protein ALIPUT_00606 [Alistipes putredinis DSM 17216]
 gi|167660603|gb|EDS04733.1| hypothetical protein ALIPUT_00606 [Alistipes putredinis DSM 17216]
          Length = 561

 Score =  117 bits (294), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 43/249 (17%), Positives = 90/249 (36%), Gaps = 8/249 (3%)

Query: 1   MPSDIKLTFP-----DGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV- 54
           M  ++  T P      G      +  T  +V   +        +A  +N ++ +L+  + 
Sbjct: 1   MNKNMSDTLPVICENAGRTIEVAMGTTLLEVERQLRLDGPHPFLAAYVNNRIKELNYRIY 60

Query: 55  REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQP 113
           +  ++  I       + V + + + I+ +AV+ ++P+  + I   +   GFY +     P
Sbjct: 61  KPVTVRFIDITSFEGIRVYQRTISFILQKAVRELFPDRTLYIRHSLGASGFYCEISGFGP 120

Query: 114 FSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTL 173
             ++ L  I+ +M+ II R+ P     +  + AR+++E    A K+ +L+S P      +
Sbjct: 121 IPAEHLDAIKARMRGIIDRNLPIQGVKMLTDTARKIYEGFGMADKIALLDSRPRL-YSKI 179

Query: 174 YRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQ 233
           Y          G    STG   +F       G +                      ++  
Sbjct: 180 YTIDSLPGYFYGALTPSTGYTPQFDLHPYYNGFFIALPLRTDPTRLQQSVHQEKMFDVFH 239

Query: 234 YLYFLEESE 242
                 E  
Sbjct: 240 QYQSWVEIM 248


>gi|22538051|ref|NP_688902.1| prolyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
 gi|76798737|ref|ZP_00780956.1| prolyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
 gi|77414704|ref|ZP_00790836.1| prolyl-tRNA synthetase [Streptococcus agalactiae 515]
 gi|81845373|sp|Q8DXD8|SYP_STRA5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|22534955|gb|AAN00775.1|AE014278_2 prolyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
 gi|76585916|gb|EAO62455.1| prolyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
 gi|77159248|gb|EAO70427.1| prolyl-tRNA synthetase [Streptococcus agalactiae 515]
          Length = 617

 Score =  117 bits (294), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 80/192 (41%), Gaps = 10/192 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  ++    G+  +     +  +   + MR++
Sbjct: 4   SKMLIPTLREMPSDAQVISHALMVRAGYVRQVSA---GIYAYLPLANRTIEKFKTIMRQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +     E+  P +L   LW++SG +++Y  +++ +K      +D   F L P +     
Sbjct: 61  FEKIGAVEMLAPALLTADLWRESGRYETYGEDLYKLKN-----RDQSDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    +KSY++LP+ L +  S YR+E     +GL+R R F   D + F    +  +   
Sbjct: 116 TLVRDAVKSYKQLPLNLYQIQSKYRDEKRPR-NGLLRTREFIMKDGYSFHKDYEDLDVTY 174

Query: 406 KIHNLIISIYKD 417
           + +         
Sbjct: 175 EDYRKAYEAIFT 186



 Score = 66.7 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/173 (19%), Positives = 63/173 (36%), Gaps = 22/173 (12%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S      +   + + +P+++     G   R +  +IE        
Sbjct: 441 RGIEIGHIFKLGTRYSDSMGANILDENGRSNPIVMGCYGIGVS-RILSAVIEQHARLFVN 499

Query: 542 ----------FKGNLPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRN 588
                     +  N P  L+P    + T+      + +  ++I   L      + TD RN
Sbjct: 500 KTPKGAYRFAWGINFPEELAPFDVHLITVNVKDQESQDLTEKIEADLMLKGYEVLTDDRN 559

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           E +  K  +  +  +PI +  G K ASE  + ++   S  T +V   + I  L
Sbjct: 560 ERVGSKFSDSDLIGLPIRVTVGKK-ASEGIVEVKIKASGDTIEVHADNLIETL 611


>gi|25011939|ref|NP_736334.1| prolyl-tRNA synthetase [Streptococcus agalactiae NEM316]
 gi|81845546|sp|Q8E362|SYP_STRA3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|24413481|emb|CAD47559.1| prolyl-tRNA synthetase [Streptococcus agalactiae NEM316]
          Length = 617

 Score =  117 bits (294), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 80/192 (41%), Gaps = 10/192 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  ++    G+  +     +  +   + MR++
Sbjct: 4   SKMLIPTLREMPSDAQVISHALMVRAGYVRQVSA---GIYAYLPLANRTIEKFKTIMRQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +     E+  P +L   LW++SG +++Y  +++ +K      +D   F L P +     
Sbjct: 61  FEKIGAVEMLAPALLTADLWRESGRYETYGEDLYKLKN-----RDQSDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    +KSY++LP+ L +  S YR+E     +GL+R R F   D + F    +  +   
Sbjct: 116 TLVRDAVKSYKQLPLNLYQIQSKYRDEKRPR-NGLLRTREFIMKDGYSFHKDYEDLDVTY 174

Query: 406 KIHNLIISIYKD 417
           + +         
Sbjct: 175 EDYRKAYEAIFT 186



 Score = 66.7 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/173 (19%), Positives = 63/173 (36%), Gaps = 22/173 (12%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S      +   + + +P+++     G   R +  +IE        
Sbjct: 441 RGIEIGHIFKLGTRYSDSMGANILDENGRSNPIVMGCYGIGVS-RILSAVIEQHARLFVN 499

Query: 542 ----------FKGNLPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRN 588
                     +  N P  L+P    + T+      + +  ++I   L      + TD RN
Sbjct: 500 KTPKGAYRFAWGINFPEELAPFDVHLITVNVKDQESQDLTEKIEADLMLKGYEVLTDDRN 559

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           E +  K  +  +  +PI +  G K ASE  + ++   S  T +V   + I  L
Sbjct: 560 ERVGSKFSDSDLIGLPIRVTVGKK-ASEGIVEVKIKASGDTIEVHADNLIETL 611


>gi|77412297|ref|ZP_00788612.1| prolyl-tRNA synthetase [Streptococcus agalactiae CJB111]
 gi|77161644|gb|EAO72640.1| prolyl-tRNA synthetase [Streptococcus agalactiae CJB111]
          Length = 617

 Score =  117 bits (294), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 80/192 (41%), Gaps = 10/192 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  ++    G+  +     +  +   + MR++
Sbjct: 4   SKMLIPTLREMPSDAQVISHALMVRAGYVRQVSA---GIYAYLPLANRTIEKFKTIMRQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +     E+  P +L   LW++SG +++Y  +++ +K      +D   F L P +     
Sbjct: 61  FEKIGAVEMLAPALLTADLWRESGRYETYGEDLYKLKN-----RDQSDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    +KSY++LP+ L +  S YR+E     +GL+R R F   D + F    +  +   
Sbjct: 116 TLVRDAVKSYKQLPLNLYQIQSKYRDEKRPR-NGLLRTREFIMKDGYSFHKDYEDLDVTY 174

Query: 406 KIHNLIISIYKD 417
           + +         
Sbjct: 175 EDYRKAYEAIFT 186



 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/173 (19%), Positives = 63/173 (36%), Gaps = 22/173 (12%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S      +   + + +P+++     G   R +  +IE        
Sbjct: 441 RGIEIGHIFKLGTRYSDSMGANILDENGRSNPIVMGCYGIGVS-RILSAVIEQHARLFVN 499

Query: 542 ----------FKGNLPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRN 588
                     +  N P  L+P    + T+      + +  ++I   L      + TD RN
Sbjct: 500 KTPKGAYRFAWGINFPEELAPFDVHLITVNVKDQESQDLTEKIEADLMLKGYEVLTDDRN 559

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           E +  K  +  +  +PI +  G K ASE  + ++   S  T +V   + I  L
Sbjct: 560 ERVGSKFSDSDLIGLPIRVTVGKK-ASEGIVEVKIKASGDTIEVHADNLIETL 611


>gi|312871363|ref|ZP_07731459.1| proline--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
 gi|312872484|ref|ZP_07732553.1| proline--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
 gi|312873339|ref|ZP_07733392.1| proline--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
 gi|311091129|gb|EFQ49520.1| proline--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
 gi|311092066|gb|EFQ50441.1| proline--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
 gi|311093115|gb|EFQ51463.1| proline--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
          Length = 566

 Score =  117 bits (293), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 41/199 (20%), Positives = 82/199 (41%), Gaps = 11/199 (5%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           + H+ + R   +  +    +GV  +    + + +     +  ++++ +  E+  P  L  
Sbjct: 21  KSHQLMLRGGYIRQV---TAGVYAYLPLAYLVLRKAEKIIEEEMENINVPEMIMPHFLPA 77

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SG    Y   MF +K      +  R   L P +      +    +KSY+++P+ L
Sbjct: 78  TLWEESGRLPKYGPEMFRLKD-----RHGRESLLGPTHEETFTEIIGKNIKSYKQMPIAL 132

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFE 421
            +  + +R+E      GL+R R F   D + F  T+EQ+  +     +    I+K  G E
Sbjct: 133 YQIQTKFRDENRPRF-GLLRGREFVMLDGYSFAATREQLDKQFDDQKHAYKKIFKRCGVE 191

Query: 422 KIMVKLSTRPEKRVGSDAL 440
              V  ++       S   
Sbjct: 192 VYPVIANSGTMGGKNSTEF 210



 Score = 75.6 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 55/158 (34%), Gaps = 6/158 (3%)

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLS 551
           + G I       +          + K  P+++     G       I+ ++   N   W  
Sbjct: 408 EVGHIFKLGTYYTNSMNAKFLDQNGKTQPIIMGSYGIGVTRMLSAIVEQHSTDNSIFWPK 467

Query: 552 PIQA--IVTTITSSAVEYAQEIANLLKS---HHLSIETDFRNETINYKIREHSIKKIPII 606
            +    I     +   +    ++  L+        +  D RNE    K  +  +   PI 
Sbjct: 468 EVAPFEIHIIQMNMKNDEQTVVSKKLEEIFSDKYDVLYDDRNERPGVKFNDADLIGAPIR 527

Query: 607 IICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           II G +  SE+ + +++     + ++SL      ++KE
Sbjct: 528 IIVGRR-VSEQIVEVKKSTEQESVEMSLDSLTEYISKE 564


>gi|325911837|ref|ZP_08174241.1| proline--tRNA ligase [Lactobacillus iners UPII 143-D]
 gi|325476343|gb|EGC79505.1| proline--tRNA ligase [Lactobacillus iners UPII 143-D]
          Length = 566

 Score =  117 bits (293), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 41/199 (20%), Positives = 82/199 (41%), Gaps = 11/199 (5%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           + H+ + R   +  +    +GV  +    + + +     +  ++++ +  E+  P  L  
Sbjct: 21  KSHQLMLRGGYIRQV---TAGVYAYLPLAYLVLRKAEKIIEEEMENINVPEMIMPHFLPA 77

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SG    Y   MF +K      +  R   L P +      +    +KSY+++P+ L
Sbjct: 78  TLWEESGRLPKYGPEMFRLKD-----RHGRESLLGPTHEETFTEIIGKNIKSYKQMPIAL 132

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFE 421
            +  + +R+E      GL+R R F   D + F  T+EQ+  +     +    I+K  G E
Sbjct: 133 YQIQTKFRDENRPRF-GLLRGREFVMLDGYSFAATREQLDKQFDDQKHAYKKIFKRCGVE 191

Query: 422 KIMVKLSTRPEKRVGSDAL 440
              V  ++       S   
Sbjct: 192 VYPVIANSGTMGGKNSTEF 210



 Score = 75.6 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 55/158 (34%), Gaps = 6/158 (3%)

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLS 551
           + G I       +          + K  P+++     G       I+ ++   N   W  
Sbjct: 408 EVGHIFKLGTYYTNSMNAKFLDQNGKTQPIIMGSYGIGVTRMLSAIVEQHSTDNSIFWPK 467

Query: 552 PIQA--IVTTITSSAVEYAQEIANLLKS---HHLSIETDFRNETINYKIREHSIKKIPII 606
            +    I     +   +    ++  L+        +  D RNE    K  +  +   PI 
Sbjct: 468 EVAPFEIHIIQMNMKNDEQTVVSKKLEEIFSDKYDVLYDDRNERPGVKFNDADLIGAPIR 527

Query: 607 IICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           II G +  SE+ + +++     + ++SL      ++KE
Sbjct: 528 IIVGRR-VSEQIVEVKKSTEQESVEMSLDSLTEYISKE 564


>gi|309809554|ref|ZP_07703412.1| proline--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
 gi|308170226|gb|EFO72261.1| proline--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
          Length = 483

 Score =  117 bits (293), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 41/199 (20%), Positives = 82/199 (41%), Gaps = 11/199 (5%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           + H+ + R   +  +    +GV  +    + + +     +  ++++ +  E+  P  L  
Sbjct: 21  KSHQLMLRGGYIRQV---TAGVYAYLPLAYLVLRNAEKIIEEEMENINVPEMIMPHFLPA 77

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SG    Y   MF +K      +  R   L P +      +    +KSY+++P+ L
Sbjct: 78  TLWEESGRLPKYGPEMFRLKD-----RHGRESLLGPTHEETFTEIIGKNIKSYKQMPIAL 132

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFE 421
            +  + +R+E      GL+R R F   D + F  T+EQ+  +     +    I+K  G E
Sbjct: 133 YQIQTKFRDENRPRF-GLLRGREFVMLDGYSFAATREQLDKQFDDQKHAYKKIFKRCGVE 191

Query: 422 KIMVKLSTRPEKRVGSDAL 440
              V  ++       S   
Sbjct: 192 VYPVIANSGTMGGKNSTEF 210


>gi|302191444|ref|ZP_07267698.1| prolyl-tRNA synthetase [Lactobacillus iners AB-1]
          Length = 566

 Score =  117 bits (293), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 41/199 (20%), Positives = 82/199 (41%), Gaps = 11/199 (5%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           + H+ + R   +  +    +GV  +    + + +     +  ++++ +  E+  P  L  
Sbjct: 21  KSHQLMLRGGYIRQV---TAGVYAYLPLAYLVLRKAEKIIEEEMENINVPEMIMPHFLPA 77

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SG    Y   MF +K      +  R   L P +      +    +KSY+++P+ L
Sbjct: 78  TLWEESGRLPKYGPEMFRLKD-----RHGRESLLGPTHEETFTEIIGKNIKSYKQMPIAL 132

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFE 421
            +  + +R+E      GL+R R F   D + F  T+EQ+  +     +    I+K  G E
Sbjct: 133 YQIQTKFRDENRPRF-GLLRGREFVMLDGYSFAATREQLDKQFDDQKHAYKKIFKRCGVE 191

Query: 422 KIMVKLSTRPEKRVGSDAL 440
              V  ++       S   
Sbjct: 192 VYPVIANSGTMGGKNSTEF 210



 Score = 76.0 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 55/158 (34%), Gaps = 6/158 (3%)

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLS 551
           + G I       +          + K  P+++     G       I+ ++   N   W  
Sbjct: 408 EVGHIFKLGTYYTNSMNAKFLDQNGKTQPIIMGSYGIGVTRMLSAIVEQHSTDNGIFWPK 467

Query: 552 PIQA--IVTTITSSAVEYAQEIANLLKS---HHLSIETDFRNETINYKIREHSIKKIPII 606
            +    I     +   +    ++  L+        +  D RNE    K  +  +   PI 
Sbjct: 468 EVAPFEIHIIQMNMKNDEQTVVSKKLEEIFSDKYDVLYDDRNERPGVKFNDADLIGAPIR 527

Query: 607 IICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           II G +  SE+ + +++     + ++SL      ++KE
Sbjct: 528 IIVGRR-VSEQIVEVKKSTEQESVEMSLDSLTEYISKE 564


>gi|325673396|ref|ZP_08153087.1| proline--tRNA ligase [Rhodococcus equi ATCC 33707]
 gi|325555417|gb|EGD25088.1| proline--tRNA ligase [Rhodococcus equi ATCC 33707]
          Length = 581

 Score =  117 bits (293), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 61/360 (16%), Positives = 125/360 (34%), Gaps = 26/360 (7%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +  IA    GV  W   G ++ + +   +R ++     +EI  P 
Sbjct: 19  DAEVASHKLLVRAGYVRRIA---PGVYSWLPLGLRVLREVERVVREEMNAMGAQEILLPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++ S  W  Y A +F +K      +      L P +             SY++ 
Sbjct: 76  LLPRDPYETSNRWTEYGAGLFRLKD-----RKGNDMMLGPTHEELFALTVKGEYNSYKDF 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKD 417
           PV L +  + YR+E      G++R R F   D++ F   ++      + H      I   
Sbjct: 131 PVTLYQVQTKYRDEERPR-AGILRGREFVMKDSYSFDLTDEGLTASYQAHRDTYERILAR 189

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN--TGVLLGEGAFY 475
            G + ++V  ++       S+    ++E      +  +++     +     +      F 
Sbjct: 190 LGVKYVIVSATSGAMGGSASEEFLAESEIGEDTYVRCLESGYAANVEAVKTLAPAPVPFD 249

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           G          +       TI       +  +     + ++    +M+   V G     +
Sbjct: 250 GL-----PPAEVRDTPDTETIDTLVEWANGADLGRAVTAADTLKNIMVKTRVPGGEWELL 304

Query: 536 GIMI----ENFKGNLPLWLSPIQAIVTTITS-SAVEYAQEIA---NLLKSHHLSIETDFR 587
            I I    E  +  L   L P + ++ T T      +  +       L+ + +    D R
Sbjct: 305 AIGIPGDREVDEKRLEASLEPAEYVLLTETDFRNNPFLVKGYIGPKALQENGVRYLVDPR 364



 Score = 83.3 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 25/160 (15%), Positives = 66/160 (41%), Gaps = 10/160 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G + Q+       F    +  + +   P M    +   + R + ++ E    +  
Sbjct: 419 RGIEVGHVFQLGRKYTDVFGVDVLGENGKPVRPTMGSYGI--GVSRLVAVIAEQHHDDKG 476

Query: 548 L-WLSPI-----QAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           L W S +       ++     +A E A+ +A  L    + +  D R  +   K ++  + 
Sbjct: 477 LRWPSEVSPFDVHLVIANKDDAAREGAEALAAELDKARVDVLFDDRKASPGVKFKDSELI 536

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            +P++++ G +  +E ++ +R   +  +++V +  A+  +
Sbjct: 537 GVPLVVVVG-RGFAEGNVELRDRFTGESREVPVDAALDEI 575


>gi|325913484|ref|ZP_08175850.1| proline--tRNA ligase [Lactobacillus iners UPII 60-B]
 gi|325477253|gb|EGC80399.1| proline--tRNA ligase [Lactobacillus iners UPII 60-B]
          Length = 566

 Score =  117 bits (293), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 41/199 (20%), Positives = 82/199 (41%), Gaps = 11/199 (5%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           + H+ + R   +  +    +GV  +    + + +     +  ++++ +  E+  P  L  
Sbjct: 21  KSHQLMLRGGYIRQV---TAGVYAYLPLAYLVLRKAEKIIEEEMENINVPEMIMPHFLPA 77

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SG    Y   MF +K      +  R   L P +      +    +KSY+++P+ L
Sbjct: 78  TLWEESGRLPKYGPEMFRLKD-----RHGRESLLGPTHEETFTEIIGKNIKSYKQMPIAL 132

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFE 421
            +  + +R+E      GL+R R F   D + F  T+EQ+  +     +    I+K  G E
Sbjct: 133 YQIQTKFRDENRPRF-GLLRGREFVMLDGYSFAATREQLDKQFDDQKHAYKKIFKRCGVE 191

Query: 422 KIMVKLSTRPEKRVGSDAL 440
              V  ++       S   
Sbjct: 192 VYPVIANSGTMGGKNSTEF 210



 Score = 76.0 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 55/158 (34%), Gaps = 6/158 (3%)

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLS 551
           + G I       +          + K  P+++     G       I+ ++   N   W  
Sbjct: 408 EVGHIFKLGTYYTNSMNAKFLDQNGKTQPIIMGSYGIGVTRMLSAIVEQHSTDNGIFWPK 467

Query: 552 PIQA--IVTTITSSAVEYAQEIANLLKS---HHLSIETDFRNETINYKIREHSIKKIPII 606
            +    I     +   +    ++  L+        +  D RNE    K  +  +   PI 
Sbjct: 468 EVAPFEIHIIQMNMKNDEQTVVSKKLEEIFSDKYDVLYDDRNERPGVKFNDADLIGAPIR 527

Query: 607 IICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           II G +  SE+ + +++     + ++SL      ++KE
Sbjct: 528 IIVGRR-VSEQIVEVKKSTEQESVEMSLDSLTEYISKE 564


>gi|329919866|ref|ZP_08276804.1| proline--tRNA ligase [Lactobacillus iners SPIN 1401G]
 gi|328936956|gb|EGG33386.1| proline--tRNA ligase [Lactobacillus iners SPIN 1401G]
          Length = 566

 Score =  117 bits (293), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 41/199 (20%), Positives = 82/199 (41%), Gaps = 11/199 (5%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           + H+ + R   +  +    +GV  +    + + +     +  ++++ +  E+  P  L  
Sbjct: 21  KSHQLMLRGGYIRQV---TAGVYAYLPLAYLVLRKAEKIIEEEMENINVPEMIMPHFLPA 77

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SG    Y   MF +K      +  R   L P +      +    +KSY+++P+ L
Sbjct: 78  TLWEESGRLPKYGPEMFRLKD-----RHGRESLLGPTHEETFTEIIGKNIKSYKQMPIAL 132

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFE 421
            +  + +R+E      GL+R R F   D + F  T+EQ+  +     +    I+K  G E
Sbjct: 133 YQIQTKFRDENRPRF-GLLRGREFVMLDGYSFAATREQLDKQFDDQKHAYKKIFKRCGVE 191

Query: 422 KIMVKLSTRPEKRVGSDAL 440
              V  ++       S   
Sbjct: 192 VYPVIANSGTMGGKNSTEF 210



 Score = 76.0 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 55/158 (34%), Gaps = 6/158 (3%)

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLS 551
           + G I       +          + K  P+++     G       I+ ++   N   W  
Sbjct: 408 EVGHIFKLGTYYTNSMNAKFLDQNGKTQPIIMGSYGIGVTRMLSAIVEQHSTDNGIFWPK 467

Query: 552 PIQA--IVTTITSSAVEYAQEIANLLKS---HHLSIETDFRNETINYKIREHSIKKIPII 606
            +    I     +   +    ++  L+        +  D RNE    K  +  +   PI 
Sbjct: 468 EVAPFEIHIIQMNMKNDEQTVVSKKLEEIFSDKYDVLYDDRNERPGVKFNDADLIGAPIR 527

Query: 607 IICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           II G +  SE+ + +++     + ++SL      ++KE
Sbjct: 528 IIVGRR-VSEQIVEVKKSTEQESVEMSLDSLTEYISKE 564


>gi|309804213|ref|ZP_07698290.1| proline--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
 gi|312875784|ref|ZP_07735776.1| proline--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
 gi|308163616|gb|EFO65886.1| proline--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
 gi|311088688|gb|EFQ47140.1| proline--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
          Length = 566

 Score =  117 bits (293), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 41/199 (20%), Positives = 82/199 (41%), Gaps = 11/199 (5%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           + H+ + R   +  +    +GV  +    + + +     +  ++++ +  E+  P  L  
Sbjct: 21  KSHQLMLRGGYIRQV---TAGVYAYLPLAYLVLRKAEKIIEEEMENINVPEMIMPHFLPA 77

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SG    Y   MF +K      +  R   L P +      +    +KSY+++P+ L
Sbjct: 78  TLWEESGRLPKYGPEMFRLKD-----RHGRESLLGPTHEETFTEIIGKNIKSYKQMPIAL 132

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFE 421
            +  + +R+E      GL+R R F   D + F  T+EQ+  +     +    I+K  G E
Sbjct: 133 YQIQTKFRDENRPRF-GLLRGREFVMLDGYSFAATREQLDKQFDDQKHAYKKIFKRCGVE 191

Query: 422 KIMVKLSTRPEKRVGSDAL 440
              V  ++       S   
Sbjct: 192 VYPVIANSGTMGGKNSTEF 210



 Score = 76.0 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 55/158 (34%), Gaps = 6/158 (3%)

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLS 551
           + G I       +          + K  P+++     G       I+ ++   N   W  
Sbjct: 408 EVGHIFKLGTYYTNSMNAKFLDQNGKTQPIIMGSYGIGVTRMLSAIVEQHSTDNGIFWPK 467

Query: 552 PIQA--IVTTITSSAVEYAQEIANLLKS---HHLSIETDFRNETINYKIREHSIKKIPII 606
            +    I     +   +    ++  L+        +  D RNE    K  +  +   PI 
Sbjct: 468 EVAPFEIHIIQMNMKNDEQTVVSKKLEEIFSDKYDVLYDDRNERPGVKFNDADLIGAPIR 527

Query: 607 IICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           II G +  SE+ + +++     + ++SL      ++KE
Sbjct: 528 IIVGRR-VSEQIVEVKKSTEQESVEMSLDSLTEYISKE 564


>gi|259501582|ref|ZP_05744484.1| proline-tRNA ligase [Lactobacillus iners DSM 13335]
 gi|259167100|gb|EEW51595.1| proline-tRNA ligase [Lactobacillus iners DSM 13335]
          Length = 581

 Score =  117 bits (293), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 41/199 (20%), Positives = 82/199 (41%), Gaps = 11/199 (5%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           + H+ + R   +  +    +GV  +    + + +     +  ++++ +  E+  P  L  
Sbjct: 36  KSHQLMLRGGYIRQV---TAGVYAYLPLAYLVLRKAEKIIEEEMENINVPEMIMPHFLPA 92

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SG    Y   MF +K      +  R   L P +      +    +KSY+++P+ L
Sbjct: 93  TLWEESGRLPKYGPEMFRLKD-----RHGRESLLGPTHEETFTEIIGKNIKSYKQMPIAL 147

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFE 421
            +  + +R+E      GL+R R F   D + F  T+EQ+  +     +    I+K  G E
Sbjct: 148 YQIQTKFRDENRPRF-GLLRGREFVMLDGYSFAATREQLDKQFDDQKHAYKKIFKRCGVE 206

Query: 422 KIMVKLSTRPEKRVGSDAL 440
              V  ++       S   
Sbjct: 207 VYPVIANSGTMGGKNSTEF 225



 Score = 76.0 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 55/158 (34%), Gaps = 6/158 (3%)

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLS 551
           + G I       +          + K  P+++     G       I+ ++   N   W  
Sbjct: 423 EVGHIFKLGTYYTNSMNAKFLDQNGKTQPIIMGSYGIGVTRMLSAIVEQHSTDNGIFWPK 482

Query: 552 PIQA--IVTTITSSAVEYAQEIANLLKS---HHLSIETDFRNETINYKIREHSIKKIPII 606
            +    I     +   +    ++  L+        +  D RNE    K  +  +   PI 
Sbjct: 483 EVAPFEIHIIQMNMKNDEQTVVSKKLEEIFSDKYDVLYDDRNERPGVKFNDADLIGAPIR 542

Query: 607 IICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           II G +  SE+ + +++     + ++SL      ++KE
Sbjct: 543 IIVGRR-VSEQIVEVKKSTEQESVEMSLDSLTEYISKE 579


>gi|33861065|ref|NP_892626.1| prolyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris
           str. CCMP1986]
 gi|81835597|sp|Q7V2H0|SYP_PROMP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|33639797|emb|CAE18967.1| Prolyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris
           str. CCMP1986]
          Length = 600

 Score =  117 bits (293), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 48/231 (20%), Positives = 99/231 (42%), Gaps = 8/231 (3%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDY-EEINTP 297
            E+E   H+ L +   +  +    SG+  +     ++ + + + + +++ + Y  ++  P
Sbjct: 17  SEAEIISHQLLLKGGYIRRV---NSGIYAYMPIMLRVIEKISTIIEKELNNIYCSKLLLP 73

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           Q+    LW++S  W+ Y A    +    D  +  + F L P +     ++ +  + SY++
Sbjct: 74  QLHPAELWKKSERWEGYTAGEGIMFNLKD--RQGKEFGLAPTHEEVITSIASEMINSYKQ 131

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYK 416
           LP+   +  + +R+E      GLMR R F   DA+ F  +KE + +   K+     +I+K
Sbjct: 132 LPLCFYQIQTKFRDEIRPRF-GLMRSREFIMKDAYSFHSSKEDLASFYEKMEKAYENIFK 190

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGV 467
           + G + + V   +       S      A+     +L T   S    I   V
Sbjct: 191 NCGLDTVGVDADSGAIGGAASKEFMVTADAGEDSILFTESGSYAANIEKAV 241



 Score = 53.6 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 64/167 (38%), Gaps = 13/167 (7%)

Query: 488 GRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN 545
            R  + G I Q+      + NA + + + +  +   +    +G  + R     IE     
Sbjct: 430 KRGIEIGHIFQLGQKYSEKLNAKFSDKNGQLKN---LWMGCYGIGVTRIAQAAIEQNHDE 486

Query: 546 ----LPLWLSPIQAIVTTITSS---AVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
                P+ +SP + ++           E  QEI     S+ + +  D R++    K ++ 
Sbjct: 487 NGISWPIQISPFEILIIPTNLKDPIQKELTQEIYEEFISNQIDVLLDDRDDRAGVKFKDA 546

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
            +  IP  II G +++  + +      S +  K++  + +     ES
Sbjct: 547 DLIGIPFQIIIG-RDSINKEVEFFSRSSKSKIKIASKNLLEKFISES 592


>gi|166030944|ref|ZP_02233773.1| hypothetical protein DORFOR_00625 [Dorea formicigenerans ATCC
           27755]
 gi|166029211|gb|EDR47968.1| hypothetical protein DORFOR_00625 [Dorea formicigenerans ATCC
           27755]
          Length = 556

 Score =  117 bits (293), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 47/215 (21%), Positives = 83/215 (38%), Gaps = 8/215 (3%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           +K+      +K +    T  D+A+   +    + V V ++GK+ +L   ++ +  I  +T
Sbjct: 9   VKIK---NEVKEYEAAITYHDIAKEYQKDYEHEIVLVFVDGKLQELHKRLKKDCEISFVT 65

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQ---VAIGPIIEDGFYYDFDKEQPFSSDELA 120
             DP      + S + ++ +AV  +        V +   I  G+Y     E     D L 
Sbjct: 66  TADPIGHEAYKRSMSFLLVKAVYDVAGHKNIDKVRMHFAIGPGYYCTITGETRVDDDFLE 125

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           ++E +M E++  D    K+ +   +A  LF       K E L        V LY   E+ 
Sbjct: 126 RVESRMHELVEADLSIKKRTVHTNEAIGLFGQYGMYDKEE-LFRYRRVSKVNLYSINEFE 184

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRP 215
           D   G  + STG +K F       G   +      
Sbjct: 185 DYYYGYMLYSTGYLKYFKLYRYDEGFVLQMPEIDK 219


>gi|308184043|ref|YP_003928176.1| prolyl-tRNA synthetase [Helicobacter pylori SJM180]
 gi|308059963|gb|ADO01859.1| prolyl-tRNA synthetase [Helicobacter pylori SJM180]
          Length = 577

 Score =  117 bits (292), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 52/300 (17%), Positives = 104/300 (34%), Gaps = 27/300 (9%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++          +++  + H+ LA+   ++ +   GSG+  +     K+   + +   +
Sbjct: 3   FSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQV---GSGIYNFLPLAKKVLDKIENITHK 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++++   + I    V+   LW++SG  D Y   +   K   D       F L P      
Sbjct: 60  RMQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKDN-----DFVLSPTLEENI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
             +  + +KSY++LPV L +  + +R+E      GL+R R F   D + F    E +  E
Sbjct: 115 TEIAANFIKSYKQLPVHLYQIHTKFRDEIRPRF-GLVRAREFIMKDGYSFHEDAESLDKE 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            L   +    I  D G +  +V+  +       S             VL      +    
Sbjct: 174 FLNTQSAYKEILSDLGLDFRIVEADSGAIGGSKSREF---------VVLTECGEDT---- 220

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
              +++ +   Y    E   +            Q+         +    +   K  P  I
Sbjct: 221 ---IVVCQNCDYAANIEIAKRSKRHEPLNVPKAQLAKFPTPNTTSAQSVAEFFKTEPYFI 277



 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/176 (11%), Positives = 56/176 (31%), Gaps = 10/176 (5%)

Query: 475 YGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           + P  +  LK    +  + G I  +         A +++ +  K     +     G    
Sbjct: 400 HCPNCQGALK--YHKSLEVGHIFKLGQGYAKSLKASFLDKNG-KEQFFEMGCYGIGISRL 456

Query: 534 FIGIMIENFKGNLPLWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFR 587
              I+ +       +W    +P   ++        +  + A E+   L    +    D R
Sbjct: 457 LSAILEQKSDDLGCVWTKNTAPFDVVIVVSNWKDEAQKKLAFEVYERLLQKGVDTLLDDR 516

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +     K+R+  +    + +I G +    +     +  +   Q +  ++    + +
Sbjct: 517 DARFGAKMRDFELIGERLALIIGKQTLENKEFECIKRANLEKQTIKDIELEEKILE 572


>gi|312139298|ref|YP_004006634.1| prolyl-tRNA ligase pros [Rhodococcus equi 103S]
 gi|311888637|emb|CBH47949.1| prolyl-tRNA ligase ProS [Rhodococcus equi 103S]
          Length = 581

 Score =  117 bits (292), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 61/360 (16%), Positives = 125/360 (34%), Gaps = 26/360 (7%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +  IA    GV  W   G ++ + +   +R ++     +EI  P 
Sbjct: 19  DAEVASHKLLVRAGYVRRIA---PGVYSWLPLGLRVLREVERVVREEMNAMGAQEILLPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++ S  W  Y A +F +K      +      L P +             SY++ 
Sbjct: 76  LLPRDPYETSNRWTEYGAGLFRLKD-----RKGNDMMLGPTHEELFALTVKGEYNSYKDF 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKD 417
           PV L +  + YR+E      G++R R F   D++ F   ++      + H      I   
Sbjct: 131 PVTLYQVQTKYRDEERPR-AGILRGREFVMKDSYSFDLTDEGLTASYQAHRDTYERILAR 189

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN--TGVLLGEGAFY 475
            G + ++V  ++       S+    ++E      +  +++     +     +      F 
Sbjct: 190 LGVKYVIVSATSGAMGGSASEEFLAESEIGEDTYVRCLESGYAANVEAVKTLAPAPVPFD 249

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           G          +       TI       +  +     + ++    +M+   V G     +
Sbjct: 250 GL-----PPAEVRDTPDTETIDTLVEWANGADLGRTVTAADTLKNIMVKTRVPGGEWELL 304

Query: 536 GIMI----ENFKGNLPLWLSPIQAIVTTITS-SAVEYAQEIA---NLLKSHHLSIETDFR 587
            I I    E  +  L   L P + ++ T T      +  +       L+ + +    D R
Sbjct: 305 AIGIPGDREVDEKRLEASLEPAEYVLLTETDFRNNPFLVKGYIGPKALQENGVRYLVDPR 364



 Score = 83.3 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 25/160 (15%), Positives = 66/160 (41%), Gaps = 10/160 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G + Q+       F    +  + +   P M    +   + R + ++ E    +  
Sbjct: 419 RGIEVGHVFQLGRKYTDVFGVDVLGENGKPVRPTMGSYGI--GVSRLVAVIAEQHHDDKG 476

Query: 548 L-WLSPI-----QAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           L W S +       ++     +A E A+ +A  L    + +  D R  +   K ++  + 
Sbjct: 477 LRWPSEVSPFDVHLVIANKDDAAREGAEALAAELDKARVDVLFDDRKASPGVKFKDSELI 536

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            +P++++ G +  +E ++ +R   +  +++V +  A+  +
Sbjct: 537 GVPLVVVVG-RGFAEGNVELRDRFTGESREVPVDAALDEI 575


>gi|302024530|ref|ZP_07249741.1| prolyl-tRNA synthetase [Streptococcus suis 05HAS68]
          Length = 620

 Score =  117 bits (292), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 78/192 (40%), Gaps = 10/192 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++    H  + R   +  I+    G+  +     ++ +   + MR +
Sbjct: 4   SKMIIPTLREMPSDASVISHALMLRAGYVRQISA---GIYSYLPLANRVIEKAKNIMREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
               D  E   P +L   +W++SG +++Y  +++ +K      ++   F L P +     
Sbjct: 61  FDKIDAIEFLAPALLSADIWRESGRYETYGDDLYKLKN-----REGSDFILGPTHEETVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    ++SY++LP+ + +  S YR+E     +GL+R R F   D + F    +  ++  
Sbjct: 116 LLARDAVQSYKQLPLNIYQIQSKYRDEKRPR-NGLLRGREFIMKDGYSFHASYESLDQTY 174

Query: 406 KIHNLIISIYKD 417
             +         
Sbjct: 175 DDYKAAYEAIFT 186



 Score = 72.9 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/179 (20%), Positives = 69/179 (38%), Gaps = 23/179 (12%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S      +   + +  P+++     G       ++ ++       
Sbjct: 442 RGIEIGHIFKLGTRYSDSMNANILDENGRSMPIIMGCYGIGVSRLLSAVLEQHARLFVNK 501

Query: 542 ---------FKGNLPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNE 589
                    +  N P  L+P    +  +     +A+E  Q I   L      + TD RNE
Sbjct: 502 TPKGEYRYAWGINFPKELAPFDVHLIPVNVKDEAAMELTQSIEASLVGAGYEVLTDDRNE 561

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV---SLLDAIPILTKES 645
            +  K  +  +  +PI +  G K A++  + ++  G+  T +V    LL+ + ILTKE+
Sbjct: 562 RVGVKFSDSDLIGLPIRVTVGKK-AADGIVEVKIKGTGDTVEVHVDQLLETLQILTKEN 619


>gi|94991250|ref|YP_599350.1| prolyl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
 gi|114152262|sp|Q1JEV3|SYP_STRPD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|94544758|gb|ABF34806.1| Prolyl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
          Length = 618

 Score =  117 bits (292), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 45/253 (17%), Positives = 97/253 (38%), Gaps = 16/253 (6%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  ++    G+  +     +  +   + MR +
Sbjct: 4   SKLLIPTLREMPSDAQVISHALMVRAGYVRQVSA---GIYAYLPLANRTIEKFKTIMREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +     E+  P +L   LW++SG +++Y  +++ +K  D++      F L P +     
Sbjct: 61  FEKIGAVEMLAPALLTADLWRESGRYETYGEDLYKLKNRDNS-----DFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    +KSY++LP+ L +  S YR+E     +GL+R R F   D + F    +  +   
Sbjct: 116 TLVRDAVKSYKQLPLNLYQIQSKYRDEKRPR-NGLLRTREFIMKDGYSFHHNYEDLDVTY 174

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA-----ENIMKGVLDTIKNSSQ 460
           + +                  +        G D+    A      ++ + V+     +S 
Sbjct: 175 EDYRQAYEAIFTRAGLDFKGIIGDGGAMG-GKDSQEFMAITPARTDLDRWVVLDKSIASM 233

Query: 461 DRINTGVLLGEGA 473
           D I   VL    A
Sbjct: 234 DAIPKEVLEEIKA 246



 Score = 66.7 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/179 (20%), Positives = 69/179 (38%), Gaps = 25/179 (13%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S      +   + +  P+++     G   R +  +IE        
Sbjct: 441 RGIEVGHIFKLGTRYSDSMGATILDENSRAVPIVMGCYGIGVS-RILSAVIEQHARLFVN 499

Query: 542 ----------FKGNLPLWLSPIQAIVTTITSS---AVEYAQEIANLLKSHHLSIETDFRN 588
                     +  N P  L+P    + T+      A +   ++   L +    + TD RN
Sbjct: 500 KTPKGDYRYAWGINFPKELAPFDVHLITVNVKDQVAQDLTAKLEADLMAKGYDVLTDDRN 559

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV---SLLDAIPILTKE 644
           E +  K  +  +  +PI +  G K A+E  + I+   +  + +V   +L++ + ILTKE
Sbjct: 560 ERVGSKFSDSDLIGLPIRVTVGKK-AAEGIVEIKIKATGDSIEVNAENLIETLEILTKE 617


>gi|94989304|ref|YP_597405.1| prolyl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
 gi|94993193|ref|YP_601292.1| prolyl-tRNA synthetase [Streptococcus pyogenes MGAS2096]
 gi|114152260|sp|Q1J9R3|SYP_STRPB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|114152261|sp|Q1JJW2|SYP_STRPC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|94542812|gb|ABF32861.1| prolyl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
 gi|94546701|gb|ABF36748.1| Prolyl-tRNA synthetase [Streptococcus pyogenes MGAS2096]
          Length = 618

 Score =  117 bits (292), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 80/192 (41%), Gaps = 10/192 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  ++    G+  +     +  +   + MR +
Sbjct: 4   SKLLIPTLREMPSDAQVISHALMVRAGYVRQVSA---GIYAYLPLANRTIEKFKTIMREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +     E+  P +L   LW++SG +++Y  +++ +K  D++      F L P +     
Sbjct: 61  FEKIGAVEMLAPALLTADLWRESGRYETYGEDLYKLKNRDNS-----DFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    +KSY++LP+ L +  S YR+E     +GL+R R F   D + F    +  +   
Sbjct: 116 TLVRDAVKSYKQLPLNLYQIQSKYRDEKRPR-NGLLRTREFIMKDGYSFHHNYEDLDVTY 174

Query: 406 KIHNLIISIYKD 417
           + +         
Sbjct: 175 EDYRQAYEAIFT 186



 Score = 65.2 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 35/179 (19%), Positives = 65/179 (36%), Gaps = 25/179 (13%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG---- 544
           R  + G I       S      +   + +  P+++     G   R +  +IE        
Sbjct: 441 RGIEVGHIFKLGTRYSDSMGATILDENGRAVPIVMGCYGIGVS-RILSAVIEQHARLFVN 499

Query: 545 -------------NLPLWLSPIQAIVTTITSS---AVEYAQEIANLLKSHHLSIETDFRN 588
                        N P  L+P    + T+      A +   ++   L +    + TD RN
Sbjct: 500 KTPKGDYRYAWGVNFPKELAPFDVHLITVNVKDQVAQDLTAKLEADLTAKGYDVLTDDRN 559

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGST---TTQKVSLLDAIPILTKE 644
           E +  K  +  +  +PI +  G K A+E  + I+   +         +L++ + ILTKE
Sbjct: 560 ERVGSKFSDSDLIGLPIRVTVGKK-AAEGIVEIKIKATGASIEVNAENLIETLEILTKE 617


>gi|223933900|ref|ZP_03625863.1| prolyl-tRNA synthetase [Streptococcus suis 89/1591]
 gi|223897426|gb|EEF63824.1| prolyl-tRNA synthetase [Streptococcus suis 89/1591]
          Length = 620

 Score =  117 bits (292), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 78/192 (40%), Gaps = 10/192 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        ++    H  + R   +  I+    G+  +     ++ +   + MR +
Sbjct: 4   SKMIIPTLREMPSDASVISHALMLRAGYVRQISA---GIYSYLPLANRVIEKAKNIMREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
               D  E   P +L   +W++SG +++Y  +++ +K      ++   F L P +     
Sbjct: 61  FDKIDAIEFLAPALLSADIWRESGRYETYGDDLYKLKN-----REGSDFILGPTHEETVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    ++SY++LP+ + +  S YR+E     +GL+R R F   D + F    +  ++  
Sbjct: 116 LLARDAVQSYKQLPLNIYQIQSKYRDEKRPR-NGLLRGREFIMKDGYSFHASYESLDQTY 174

Query: 406 KIHNLIISIYKD 417
             +         
Sbjct: 175 DDYKAAYEAIFT 186



 Score = 72.9 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/179 (20%), Positives = 69/179 (38%), Gaps = 23/179 (12%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S      +   + +  P+++     G       ++ ++       
Sbjct: 442 RGIEIGHIFKLGTRYSDSMNANILDENGRSMPIIMGCYGIGVSRLLSAVLEQHARLFVNK 501

Query: 542 ---------FKGNLPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNE 589
                    +  N P  L+P    +  +     +A+E  Q I   L      + TD RNE
Sbjct: 502 TPKGEYRYAWGINFPKELAPFDVHLIPVNVKDEAAMELTQSIEASLVGAGYEVLTDDRNE 561

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV---SLLDAIPILTKES 645
            +  K  +  +  +PI +  G K A++  + ++  G+  T +V    LL+ + ILTKE+
Sbjct: 562 RVGVKFSDSDLIGLPIRVTVGKK-AADGIVEVKIKGTGDTVEVHVDQLLETLQILTKEN 619


>gi|222152444|ref|YP_002561619.1| prolyl-tRNA synthetase [Streptococcus uberis 0140J]
 gi|254782919|sp|B9DTD1|SYP_STRU0 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|222113255|emb|CAR40772.1| prolyl-tRNA synthetase [Streptococcus uberis 0140J]
          Length = 618

 Score =  117 bits (292), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 34/192 (17%), Positives = 80/192 (41%), Gaps = 10/192 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  ++    G+  +     +  + L + MR++
Sbjct: 4   SKMLIPTLREMPSDAQVISHALMMRAGYVRQVSA---GIYAYLPLANRTIEKLKTIMRQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
                  E+  P +L   LW++SG +++Y  +++ +K      ++   F L P +     
Sbjct: 61  FDKIGAVEMLAPALLTADLWRESGRYETYGDDLYKLKN-----RESSDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    +KSY++LP+ L +  + YR+E     +GL+R R F   D + F    +  +   
Sbjct: 116 TLVRDAVKSYKQLPLNLYQIQAKYRDEKRPR-NGLLRTREFIMKDGYSFHQNYEDLDVTY 174

Query: 406 KIHNLIISIYKD 417
           + +         
Sbjct: 175 EDYRKAYEAIFT 186



 Score = 64.8 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 37/183 (20%), Positives = 68/183 (37%), Gaps = 27/183 (14%)

Query: 484 KDAIGRDWQCGTIQVDFNLP--SRFNAF---YVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            D  G       I+V       +R++      +   + K  P+++     G   R +  +
Sbjct: 431 PDGHGHLQFARGIEVGHIFKLGTRYSDSLGANILDENGKSIPIVMGCYGIGVS-RILSAV 489

Query: 539 IE-----------------NFKGNLPLWLSPIQAIVTTITSSAVE---YAQEIANLLKSH 578
           IE                 ++  N P  L+P    + T+ +   E      ++   L + 
Sbjct: 490 IEQHARLFVSKTPKGEYRYSWGINFPKELAPFDIHLITVNTKDEEAQTLTDKLEKELMTK 549

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
              + TD RNE +  K  +  +  +PI I  G K ASE  + I+   S  + +V+  + I
Sbjct: 550 GYEVLTDDRNERVGSKFSDSDLIGLPIRITVGKK-ASEGIVEIKIKASGDSIEVNAENVI 608

Query: 639 PIL 641
             L
Sbjct: 609 ETL 611


>gi|217076234|ref|YP_002333950.1| udk phosphoribulokinase family protein [Thermosipho africanus
           TCF52B]
 gi|217036087|gb|ACJ74609.1| udk phosphoribulokinase family protein [Thermosipho africanus
           TCF52B]
          Length = 558

 Score =  117 bits (292), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 44/246 (17%), Positives = 86/246 (34%), Gaps = 6/246 (2%)

Query: 5   IKLTFPD-GSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
           I+LTF D G         T     +   +      VA  +N  + +L  P+ R G +E +
Sbjct: 4   IELTFKDDGKKITVEKGTTLERFVDEYEKYYESPIVAAKLNNSIVELFRPIIRSGEVEFL 63

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF---DKEQPFSSDEL 119
                    + +     I+   ++ ++P+  + +   +    Y +    + ++  S  E+
Sbjct: 64  DINSTDGFRIYQRGLLFILKHTLKKLYPDYTLKVSHSVGKAIYCELKSKNNKKILSESEI 123

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            +++ +M ++I  +  F+K  L   +A +LFE      KV +L+    K          +
Sbjct: 124 KKVKDEMMKLINENKKFIKLELLKSEALKLFEELGFNDKVSLLKYRKKKTVKVYKVDDNF 183

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            D   G    STG +K F       G      + +     I          +        
Sbjct: 184 -DYFYGYMPLSTGILKYFDLAKYEEGFVLILPTFKDKKPIIEFKPLPKLSAVFLEYEKWL 242

Query: 240 ESEKRD 245
           E    D
Sbjct: 243 EIMNID 248


>gi|226330399|ref|ZP_03805917.1| hypothetical protein PROPEN_04317 [Proteus penneri ATCC 35198]
 gi|225201194|gb|EEG83548.1| hypothetical protein PROPEN_04317 [Proteus penneri ATCC 35198]
          Length = 87

 Score =  117 bits (292), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 57/87 (65%), Positives = 69/87 (79%)

Query: 339 MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE 398
           MNCPGHV +F  GL+SYR+LP+R+AEFGS +RNEPSG+LHGLMRVRGFTQDDAH+FCT+E
Sbjct: 1   MNCPGHVQIFKQGLRSYRDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEE 60

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMV 425
           Q+ +E      LI  +Y  FGFEK   
Sbjct: 61  QILSEVNDCIKLIYDVYSTFGFEKNCC 87


>gi|71904323|ref|YP_281126.1| prolyl-tRNA synthetase [Streptococcus pyogenes MGAS6180]
 gi|114152264|sp|Q48R89|SYP_STRPM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|71803418|gb|AAX72771.1| prolyl-tRNA synthetase [Streptococcus pyogenes MGAS6180]
          Length = 618

 Score =  117 bits (292), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 80/192 (41%), Gaps = 10/192 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  ++    G+  +     +  +   + MR +
Sbjct: 4   SKLLIPTLREMPSDAQVISHALMVRAGYVRQVSA---GIYAYLPLANRTIEKFKTIMREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +     E+  P +L   LW++SG +++Y  +++ +K  D++      F L P +     
Sbjct: 61  FEKIGAVEMLAPALLTADLWRESGRYETYGEDLYKLKNRDNS-----DFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    +KSY++LP+ L +  S YR+E     +GL+R R F   D + F    +  +   
Sbjct: 116 TLVRDAVKSYKQLPLNLYQIQSKYRDEKRPR-NGLLRTREFIMKDGYSFHHNYEDLDVTY 174

Query: 406 KIHNLIISIYKD 417
           + +         
Sbjct: 175 EDYRQAYEAIFT 186



 Score = 66.0 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/179 (20%), Positives = 69/179 (38%), Gaps = 25/179 (13%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S      +   + +  P+++     G   R +  +IE        
Sbjct: 441 RGIEVGHIFKLGTRYSDSMGATILDENGRTVPIVMGCYGIGVS-RILSAVIEQHARLFVN 499

Query: 542 ----------FKGNLPLWLSPIQAIVTTITSS---AVEYAQEIANLLKSHHLSIETDFRN 588
                     +  N P  L+P    + T+      A +   ++   L +    + TD RN
Sbjct: 500 KTPKGDYRYAWGINFPKELAPFDVHLITVNVKDQVAQDLTAKLEADLMAKGYDVLTDDRN 559

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV---SLLDAIPILTKE 644
           E +  K  +  +  +PI +  G K A+E  + I+   +  + +V   +L++ + ILTKE
Sbjct: 560 ERVGSKFSDSDLIGLPIRVTVGKK-AAEGIVEIKIKATGDSIEVNAENLIETLEILTKE 617


>gi|323126466|gb|ADX23763.1| prolyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis ATCC 12394]
          Length = 618

 Score =  117 bits (292), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 43/253 (16%), Positives = 94/253 (37%), Gaps = 16/253 (6%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  ++    G+  +     +  +   + MR +
Sbjct: 4   SKMLIPTLREMPSDAQVISHALMVRAGYVRQVSA---GIYAYLPLANRTIEKFKTIMREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +     E+  P +L   LW++SG +++Y  +++ +K      +D   F L P +     
Sbjct: 61  FEKIGAVEMLAPALLTADLWRESGRYETYGDDLYKLKN-----RDKSDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    +KSY++LP+ L +  + YR+E     +GL+R R F   D + F       +   
Sbjct: 116 TLVRDAVKSYKQLPLNLYQIQAKYRDEKRPR-NGLLRTREFIMKDGYSFHPNYDDLDVTY 174

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD-----ALWDDAENIMKGVLDTIKNSSQ 460
           + +                  +        G D     A+  +  ++ + V+      S 
Sbjct: 175 EDYRQAYEAIFTRAGLDFKGIIGDGGAMG-GKDSQEFMAITPERTDLDRWVVLDKSIPSL 233

Query: 461 DRINTGVLLGEGA 473
             I   VL    A
Sbjct: 234 ADIPEEVLEEIKA 246



 Score = 65.6 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 35/179 (19%), Positives = 69/179 (38%), Gaps = 25/179 (13%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S      +   + +  P+++     G   R +  +IE        
Sbjct: 441 RGIEVGHIFKLGTRYSDSMGATILDENGRAVPIVMGCYGIGVS-RILSAVIEQHARLFVN 499

Query: 542 ----------FKGNLPLWLSPIQAIVTTITSS---AVEYAQEIANLLKSHHLSIETDFRN 588
                     +  N P  L+P    + T+      A +    +   L ++   + TD RN
Sbjct: 500 KTPKGDYRYAWGINFPKELAPFDVHLITVNVKDQAAQDLTATLEADLMANGYDVLTDDRN 559

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS---LLDAIPILTKE 644
           E +  K  +  +  +PI +  G K A++  + I+   +  + +V+   L++ + ILTKE
Sbjct: 560 ERVGSKFSDSDLIGLPIRVTVGKK-AADGIVEIKIKATGDSIEVTADNLIETLEILTKE 617


>gi|323341796|ref|ZP_08082029.1| proline--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
 gi|322464221|gb|EFY09414.1| proline--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
          Length = 569

 Score =  117 bits (292), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 42/197 (21%), Positives = 84/197 (42%), Gaps = 11/197 (5%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
           +I +  SGV  +   G K+   + + +R ++   D +E+  P ++ + ++  SG  D   
Sbjct: 39  YIKKSSSGVYMYMPLGLKVKNKIENIIREEMNAIDAQEMTMPTLIPEDVYVASGRRDIIG 98

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
            +MF +       +  + F L P +           ++SY+++P  L +F + +R+E   
Sbjct: 99  TSMFQLDD-----RFKKPFVLGPTHEELFAQAAQMKIRSYKDMPFSLYQFQTKFRDEARP 153

Query: 376 SLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              GL+RVR F   D++ F    E        +      I+   G +  +V+  T     
Sbjct: 154 RF-GLIRVREFVMKDSYTFDADLESADKSYDAMFEAYKRIFDRVGLDYRIVRADTGIMGG 212

Query: 435 VGSDAL---WDDAENIM 448
           + S+      D  E+I+
Sbjct: 213 LLSEEFQAVTDIGEDIL 229



 Score = 82.1 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 23/152 (15%), Positives = 55/152 (36%), Gaps = 10/152 (6%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPI 553
           +           Y++ +++     M    +   + R +  ++E          P+ L+P 
Sbjct: 418 LGTKYSKAMGLEYLDQNNKLQDVYMGSYGI--GLGRTLAAVVEQNNDENGIVWPMNLAPF 475

Query: 554 QAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           Q  +  I       + +A ++   L    L +  D R +    K  +  +  +P+ I  G
Sbjct: 476 QVAIVVINNKNEEHMAFADDLYQELSQAGLEVILDDRKQRPGIKFNDMDLIGVPLRITVG 535

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            ++     + ++   S   QK+   D + +L 
Sbjct: 536 -RDVEHGEVELKERKSGNEQKIKREDILNVLK 566


>gi|21911224|ref|NP_665492.1| prolyl-tRNA synthetase [Streptococcus pyogenes MGAS315]
 gi|28896602|ref|NP_802952.1| prolyl-tRNA synthetase [Streptococcus pyogenes SSI-1]
 gi|81847409|sp|Q8K5S7|SYP_STRP3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|21905437|gb|AAM80295.1| putative prolyl-tRNA synthetase [Streptococcus pyogenes MGAS315]
 gi|28811856|dbj|BAC64785.1| putative prolyl-tRNA synthetase [Streptococcus pyogenes SSI-1]
          Length = 618

 Score =  117 bits (292), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 81/192 (42%), Gaps = 10/192 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  ++    G+  +     +  +   + MR +
Sbjct: 4   SKLLIPTLREMPSDAQVISHALMVRAGYVRQVSA---GIYAYLPLANRTIEKFKTIMREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +     E+  P +L   LW++SG +++Y  +++ +K  D++      F L P +     
Sbjct: 61  FEKIGAVEMLAPALLTADLWRESGRYETYGEDLYKLKNRDNS-----DFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +  + +KSY++LP+ L +  S YR+E     +GL+R R F   D + F    +  +   
Sbjct: 116 TLVRNAVKSYKQLPLNLYQIQSKYRDEKRPR-NGLLRTREFIMKDGYSFHHNYEDLDVTY 174

Query: 406 KIHNLIISIYKD 417
           + +         
Sbjct: 175 EDYRQAYEAIFT 186



 Score = 66.0 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/179 (20%), Positives = 69/179 (38%), Gaps = 25/179 (13%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S      +   + +  P+++     G   R +  +IE        
Sbjct: 441 RGIEVGHIFKLGTRYSDSMGATILDENGRTVPIVMGCYGIGVS-RILSAVIEQHARLFVN 499

Query: 542 ----------FKGNLPLWLSPIQAIVTTITSS---AVEYAQEIANLLKSHHLSIETDFRN 588
                     +  N P  L+P    + T+      A +   ++   L +    + TD RN
Sbjct: 500 KTPKGDYRYAWGINFPKELAPFDVHLITVNVKDQVAQDLTAKLEADLMAKGYDVLTDDRN 559

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV---SLLDAIPILTKE 644
           E +  K  +  +  +PI +  G K A+E  + I+   +  + +V   +L++ + ILTKE
Sbjct: 560 ERVGSKFSDSDLIGLPIRVTVGKK-AAEGIVEIKIKATGDSIEVNAENLIETLEILTKE 617


>gi|322411037|gb|EFY01945.1| prolyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           dysgalactiae ATCC 27957]
          Length = 618

 Score =  117 bits (292), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 43/253 (16%), Positives = 94/253 (37%), Gaps = 16/253 (6%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  ++    G+  +     +  +   + MR +
Sbjct: 4   SKMLIPTLREMPSDAQVISHALMVRAGYVRQVSA---GIYAYLPLANRTIEKFKTIMREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +     E+  P +L   LW++SG +++Y  +++ +K      +D   F L P +     
Sbjct: 61  FEKIGAVEMLAPALLTADLWRESGRYETYGDDLYKLKN-----RDKSDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    +KSY++LP+ L +  + YR+E     +GL+R R F   D + F       +   
Sbjct: 116 TLVRDAVKSYKQLPLNLYQIQAKYRDEKRPR-NGLLRTREFIMKDGYSFHPNYDDLDVTY 174

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD-----ALWDDAENIMKGVLDTIKNSSQ 460
           + +                  +        G D     A+  +  ++ + V+      S 
Sbjct: 175 EDYRQAYEAIFTRAGLDFKGIIGDGGAMG-GKDSQEFMAITPERTDLDRWVVLDKSIPSL 233

Query: 461 DRINTGVLLGEGA 473
             I   VL    A
Sbjct: 234 ADIPEEVLEEIKA 246



 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/179 (19%), Positives = 68/179 (37%), Gaps = 25/179 (13%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S      +   + +  P+++     G   R +  +IE        
Sbjct: 441 RGIEVGHIFKLGTRYSDSMGATILDDNGRAVPIVMGCYGIGVS-RILSAVIEQHARLFVN 499

Query: 542 ----------FKGNLPLWLSPIQAIVTTITSS---AVEYAQEIANLLKSHHLSIETDFRN 588
                     +  N P  L+P    + T+      A +    +   L +    + TD RN
Sbjct: 500 KTPKGDYRYAWGINFPKELAPFDVHLITVNVKDQAAQDLTATLEADLMAKGYDVLTDDRN 559

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS---LLDAIPILTKE 644
           E +  K  +  +  +PI +  G K A++  + I+   +  + +V+   L++ + ILTKE
Sbjct: 560 ERVGSKFSDSDLIGLPIRVTVGKK-AADGIVEIKIKATGDSVEVTADNLIETLEILTKE 617


>gi|306826599|ref|ZP_07459905.1| proline--tRNA ligase [Streptococcus pyogenes ATCC 10782]
 gi|304431207|gb|EFM34210.1| proline--tRNA ligase [Streptococcus pyogenes ATCC 10782]
          Length = 618

 Score =  117 bits (292), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 80/192 (41%), Gaps = 10/192 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  ++    G+  +     +  +   + MR +
Sbjct: 4   SKLLIPTLREMSSDAQVISHALMVRAGYVRQVSA---GIYAYLPLANRTIEKFKTIMREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +     E+  P +L   LW++SG +++Y  +++ +K  D++      F L P +     
Sbjct: 61  FEKIGAVEMLAPALLTADLWRESGRYETYGEDLYKLKNRDNS-----DFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    +KSY++LP+ L +  S YR+E     +GL+R R F   D + F    +  +   
Sbjct: 116 TLVRDAVKSYKQLPLNLYQIQSKYRDEKRPR-NGLLRTREFIMKDGYSFHHNYEDLDVTY 174

Query: 406 KIHNLIISIYKD 417
           + +         
Sbjct: 175 EDYRQAYEAIFT 186



 Score = 66.0 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/179 (20%), Positives = 69/179 (38%), Gaps = 25/179 (13%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S      +   + +  P+++     G   R +  +IE        
Sbjct: 441 RGIEVGHIFKLGTRYSDSMGATILDENGRTVPIVMGCYGIGVS-RILSAVIEQHARLFVN 499

Query: 542 ----------FKGNLPLWLSPIQAIVTTITSS---AVEYAQEIANLLKSHHLSIETDFRN 588
                     +  N P  L+P    + T+      A +   ++   L +    + TD RN
Sbjct: 500 KTPKGDYRYAWGINFPKELAPFDVHLITVNVKDQVAQDLTAKLEADLMAKGYDVLTDDRN 559

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV---SLLDAIPILTKE 644
           E +  K  +  +  +PI +  G K A+E  + I+   +  + +V   +L++ + ILTKE
Sbjct: 560 ERVGSKFSDSDLIGLPIRVTVGKK-AAEGIVEIKIKATGDSIEVNAENLIETLEILTKE 617


>gi|261839095|gb|ACX98860.1| prolyl-tRNA synthetase [Helicobacter pylori 52]
          Length = 577

 Score =  117 bits (292), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 44/217 (20%), Positives = 88/217 (40%), Gaps = 11/217 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++          +++  + H+ LA+   ++ +   GSG+  +     K+   + +   +
Sbjct: 3   FSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQV---GSGIYNFLPLAKKVLDKIENITHK 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++++   + I    V+   LW++SG  D Y   +   K   D       F L P      
Sbjct: 60  RMQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKDN-----DFVLSPTLEENI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
             +  + +KSY++LPV L +  + +R+E      GL+R R F   D + F    E +  E
Sbjct: 115 TEIAANFIKSYKQLPVHLYQIHTKFRDEIRPRF-GLVRAREFIMKDGYSFHEDAESLDKE 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            L + +    I  D G +  +V+  +       S   
Sbjct: 174 FLNMQSAYKEILSDLGLDFRIVEADSGAIGGSKSREF 210



 Score = 62.9 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 18/154 (11%), Positives = 49/154 (31%), Gaps = 8/154 (5%)

Query: 487 IGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
             +  + G I  +         A +++ +  K     +     G       I+ +     
Sbjct: 410 YHKSLEVGHIFKLGQGYAKSLKASFLDKNG-KERFFEMGCYGIGISRLLSAILEQKSDDL 468

Query: 546 LPLWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
             +W    +P   ++        +  + A E+   L+   + +  D R+     K+R+  
Sbjct: 469 GCVWTKNTAPFDVVIVVSNWKDEAQKKLAFEVYERLRQKGVDVLLDDRDARFGAKMRDFE 528

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
           +    + +I G +    +     +  +   Q + 
Sbjct: 529 LIGERLALIIGKQTLENKEFECIKRANLEKQTLK 562


>gi|56808720|ref|ZP_00366440.1| COG0442: Prolyl-tRNA synthetase [Streptococcus pyogenes M49 591]
 gi|94995163|ref|YP_603261.1| prolyl-tRNA synthetase [Streptococcus pyogenes MGAS10750]
 gi|209560100|ref|YP_002286572.1| prolyl-tRNA synthetase [Streptococcus pyogenes NZ131]
 gi|114152263|sp|Q1J4L9|SYP_STRPF RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226701346|sp|B5XIL5|SYP_STRPZ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|94548671|gb|ABF38717.1| Prolyl-tRNA synthetase [Streptococcus pyogenes MGAS10750]
 gi|209541301|gb|ACI61877.1| Prolyl-tRNA synthetase [Streptococcus pyogenes NZ131]
          Length = 618

 Score =  117 bits (292), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 80/192 (41%), Gaps = 10/192 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  ++    G+  +     +  +   + MR +
Sbjct: 4   SKLLIPTLREMPSDAQVISHALMVRAGYVRQVSA---GIYAYLPLANRTIEKFKTIMREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +     E+  P +L   LW++SG +++Y  +++ +K  D++      F L P +     
Sbjct: 61  FEKIGAVEMLAPALLTADLWRESGRYETYGEDLYKLKNRDNS-----DFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    +KSY++LP+ L +  S YR+E     +GL+R R F   D + F    +  +   
Sbjct: 116 TLVRDAVKSYKQLPLNLYQIQSKYRDEKRPR-NGLLRTREFIMKDGYSFHHNYEDLDVTY 174

Query: 406 KIHNLIISIYKD 417
           + +         
Sbjct: 175 EDYRQAYEAIFT 186



 Score = 66.0 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/179 (20%), Positives = 69/179 (38%), Gaps = 25/179 (13%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S      +   + +  P+++     G   R +  +IE        
Sbjct: 441 RGIEVGHIFKLGTRYSDSMGATILDENGRTVPIVMGCYGIGVS-RILSAVIEQHARLFVN 499

Query: 542 ----------FKGNLPLWLSPIQAIVTTITSS---AVEYAQEIANLLKSHHLSIETDFRN 588
                     +  N P  L+P    + T+      A +   ++   L +    + TD RN
Sbjct: 500 KTPKGDYRYAWGINFPKELAPFDVHLITVNVKDQVAQDLTAKLEADLMAKGYDVLTDDRN 559

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV---SLLDAIPILTKE 644
           E +  K  +  +  +PI +  G K A+E  + I+   +  + +V   +L++ + ILTKE
Sbjct: 560 ERVGSKFSDSDLIGLPIRVTVGKK-AAEGIVEIKIKATGDSIEVNAENLIETLEILTKE 617


>gi|15675760|ref|NP_269934.1| prolyl-tRNA synthetase [Streptococcus pyogenes M1 GAS]
 gi|71911486|ref|YP_283036.1| prolyl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
 gi|81856026|sp|Q99XY4|SYP_STRP1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|13622982|gb|AAK34655.1| putative prolyl-tRNA synthetase [Streptococcus pyogenes M1 GAS]
 gi|71854268|gb|AAZ52291.1| prolyl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
          Length = 618

 Score =  117 bits (292), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 80/192 (41%), Gaps = 10/192 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  ++    G+  +     +  +   + MR +
Sbjct: 4   SKLLIPTLREMPSDAQVISHALMVRAGYVRQVSA---GIYAYLPLANRTIEKFKTIMREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +     E+  P +L   LW++SG +++Y  +++ +K  D++      F L P +     
Sbjct: 61  FEKIGAVEMLAPALLTADLWRESGRYETYGEDLYKLKNRDNS-----DFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    +KSY++LP+ L +  S YR+E     +GL+R R F   D + F    +  +   
Sbjct: 116 TLVRDAVKSYKQLPLNLYQIQSKYRDEKRPR-NGLLRTREFIMKDGYSFHHNYEDLDVTY 174

Query: 406 KIHNLIISIYKD 417
           + +         
Sbjct: 175 EDYRQAYEAIFT 186



 Score = 66.0 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/179 (20%), Positives = 69/179 (38%), Gaps = 25/179 (13%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S      +   + +  P+++     G   R +  +IE        
Sbjct: 441 RGIEVGHIFKLGTRYSDSMGATILDENGRTVPIVMGCYGIGVS-RILSAVIEQHARLFVN 499

Query: 542 ----------FKGNLPLWLSPIQAIVTTITSS---AVEYAQEIANLLKSHHLSIETDFRN 588
                     +  N P  L+P    + T+      A +   ++   L +    + TD RN
Sbjct: 500 KTPKGDYRYAWGINFPKELAPFDVHLITVNVKDQVAQDLTAKLEADLMAKGYDVLTDDRN 559

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV---SLLDAIPILTKE 644
           E +  K  +  +  +PI +  G K A+E  + I+   +  + +V   +L++ + ILTKE
Sbjct: 560 ERVGSKFSDSDLIGLPIRVTVGKK-AAEGIVEIKIKATGDSIEVNAENLIETLEILTKE 617


>gi|19746872|ref|NP_608008.1| prolyl-tRNA synthetase [Streptococcus pyogenes MGAS8232]
 gi|81847886|sp|Q8NZB4|SYP_STRP8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|19749114|gb|AAL98507.1| putative prolyl-tRNA synthetase [Streptococcus pyogenes MGAS8232]
          Length = 618

 Score =  117 bits (292), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 81/192 (42%), Gaps = 10/192 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  ++    G+  +     +  +   + MR +
Sbjct: 4   SKLLIPTLREMPSDAQVISHALMVRAGYVRQVSA---GIYAYLPLANRTIEKFKTIMREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +     E+  P +L   LW++SG +++Y  +++ +K  D++      F L P +     
Sbjct: 61  FEKIGAVEMLAPALLTADLWRESGRYETYGEDLYKLKNRDNS-----DFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +  + +KSY++LP+ L +  S YR+E     +GL+R R F   D + F    +  +   
Sbjct: 116 TLVRNAVKSYKQLPLNLYQIQSKYRDEKRPR-NGLLRTREFIMKDGYSFHHNYEDLDVTY 174

Query: 406 KIHNLIISIYKD 417
           + +         
Sbjct: 175 EDYRQAYEAIFT 186



 Score = 66.0 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/179 (20%), Positives = 69/179 (38%), Gaps = 25/179 (13%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S      +   + +  P+++     G   R +  +IE        
Sbjct: 441 RGIEVGHIFKLGTRYSDSMGATILDENGRAVPIVMGCYGIGVS-RILSAVIEQHARLFVN 499

Query: 542 ----------FKGNLPLWLSPIQAIVTTITSS---AVEYAQEIANLLKSHHLSIETDFRN 588
                     +  N P  L+P    + T+      A +   ++   L +    + TD RN
Sbjct: 500 KTPKGDYRYAWGINFPKELAPFDVHLITVNVKDQVAQDLTAKLEADLMAKGYDVLTDDRN 559

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV---SLLDAIPILTKE 644
           E +  K  +  +  +PI +  G K A+E  + I+   +  + +V   +L++ + ILTKE
Sbjct: 560 ERVGSKFSDSDLIGLPIRVTVGKK-AAEGIVEIKIKATGDSIEVNAENLIETLEILTKE 617


>gi|251781674|ref|YP_002995976.1| prolyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|242390303|dbj|BAH80762.1| prolyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
          Length = 618

 Score =  116 bits (291), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 43/253 (16%), Positives = 94/253 (37%), Gaps = 16/253 (6%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  ++    G+  +     +  +   + MR +
Sbjct: 4   SKMLIPTLREMPSDAQVISHALMVRAGYVRQVSA---GIYAYLPLANRTIEKFKTIMREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +     E+  P +L   LW++SG +++Y  +++ +K      +D   F L P +     
Sbjct: 61  FEKIGAVEMLAPALLTADLWRESGRYETYGDDLYKLKN-----RDKSDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    +KSY++LP+ L +  + YR+E     +GL+R R F   D + F       +   
Sbjct: 116 TLVRDAVKSYKQLPLNLYQIQAKYRDEKRPR-NGLLRTREFIMKDGYSFHPNYDDLDVTY 174

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD-----ALWDDAENIMKGVLDTIKNSSQ 460
           + +                  +        G D     A+  +  ++ + V+      S 
Sbjct: 175 EDYRQAYEAIFTRAGLDFKGIIGDGGAMG-GKDSQEFMAITPERTDLDRWVVLDKSIPSL 233

Query: 461 DRINTGVLLGEGA 473
             I   VL    A
Sbjct: 234 ADIPEEVLEEIKA 246



 Score = 64.8 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 35/179 (19%), Positives = 68/179 (37%), Gaps = 25/179 (13%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S      +   + +  P+++     G   R +  +IE        
Sbjct: 441 RGIEVGHIFKLGTRYSDSMGATILDENGRAVPIVMGCYGIGVS-RILSAVIEQHARLFVN 499

Query: 542 ----------FKGNLPLWLSPIQAIVTTITSS---AVEYAQEIANLLKSHHLSIETDFRN 588
                     +  N P  L+P    + T+      A +    +   L +    + TD RN
Sbjct: 500 KTPKGDYRYAWGINFPKELAPFDVHLITVNVKDQAAQDLTATLEADLMAKGYEVLTDDRN 559

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS---LLDAIPILTKE 644
           E +  K  +  +  +PI +  G K A++  + I+   +  + +V+   L++ + ILTKE
Sbjct: 560 ERVGSKFSDSDLIGLPIRVTVGKK-AADGIVEIKIKATGDSIEVTADNLIETLEILTKE 617


>gi|162139703|ref|YP_819759.2| prolyl-tRNA synthetase [Streptococcus thermophilus LMD-9]
 gi|148887037|sp|Q03MK9|SYP_STRTD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
          Length = 620

 Score =  116 bits (291), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 36/192 (18%), Positives = 81/192 (42%), Gaps = 10/192 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  ++    G+  +     +  +   + MR +
Sbjct: 4   SKMLIPTLREMPSDAQVISHALMVRAGYVRQVSA---GIYAYMPLANRAIEKFKTIMREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +     E+  P +L   LW++SG +++Y  +++ +K  D++      F L P +     
Sbjct: 61  FEKIGAVEMLAPALLTADLWRESGRYETYGEDLYKLKNRDNS-----DFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    +KSY++LP+ L +  S YR+E     +GL+R R F   DA+ F    +  +   
Sbjct: 116 VLVRDAVKSYKQLPLNLYQIQSKYRDEKRPR-NGLLRTREFIMKDAYSFHQNYEDLDVTY 174

Query: 406 KIHNLIISIYKD 417
           + +         
Sbjct: 175 EDYRKAYEAIFT 186



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/175 (19%), Positives = 64/175 (36%), Gaps = 24/175 (13%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S      V   + +  P+++     G   R +  +IE        
Sbjct: 441 RGIEIGHIFKLGTRYSESMGANVLDENGRAVPIIMGCYGIGVS-RILSAVIEQHARLFVN 499

Query: 542 ----------FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSH----HLSIETDFR 587
                     +  N P  L+P    + T+ +   E A  + + L++        +  D R
Sbjct: 500 KTPKGQYRYAWGINFPKELAPYDVHLITVNTKDEE-ANALTDRLEAALAAEGYDVLIDDR 558

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           NE +  K  +  +  +PI +  G K ASE  + ++   +  T +V+  + I  L 
Sbjct: 559 NERVGSKFSDSDLIGLPIRVTVGKK-ASEGVVEVKIKATGDTIEVNADNLIETLA 612


>gi|50915027|ref|YP_060999.1| prolyl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
 gi|139474448|ref|YP_001129164.1| prolyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
 gi|81822684|sp|Q5X9U7|SYP_STRP6 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|152112957|sp|A2RGI4|SYP_STRPG RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|50904101|gb|AAT87816.1| Prolyl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
 gi|134272695|emb|CAM30966.1| prolyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
          Length = 618

 Score =  116 bits (291), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 80/192 (41%), Gaps = 10/192 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  ++    G+  +     +  +   + MR +
Sbjct: 4   SKLLIPTLREMPSDAQVISHALMVRAGYVRQVSA---GIYAYLPLANRTIEKFKTIMREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +     E+  P +L   LW++SG +++Y  +++ +K  D++      F L P +     
Sbjct: 61  FEKIGAVEMLAPALLTADLWRESGRYETYGEDLYKLKNRDNS-----DFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    +KSY++LP+ L +  S YR+E     +GL+R R F   D + F    +  +   
Sbjct: 116 TLVRDAVKSYKQLPLNLYQIQSKYRDEKRPR-NGLLRTREFIMKDGYSFHHNYEDLDVTY 174

Query: 406 KIHNLIISIYKD 417
           + +         
Sbjct: 175 EDYRQAYEAIFT 186



 Score = 66.0 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/179 (20%), Positives = 69/179 (38%), Gaps = 25/179 (13%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S      +   + +  P+++     G   R +  +IE        
Sbjct: 441 RGIEVGHIFKLGTRYSDSMGAKILDENGRAVPIVMGCYGIGVS-RILSAVIEQHARLFVN 499

Query: 542 ----------FKGNLPLWLSPIQAIVTTITSS---AVEYAQEIANLLKSHHLSIETDFRN 588
                     +  N P  L+P    + T+      A +   ++   L +    + TD RN
Sbjct: 500 KTPKGDYRYAWGINFPKELAPFDVHLITVNVKDQAAQDLTAKLEADLMAKGYDVLTDDRN 559

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV---SLLDAIPILTKE 644
           E +  K  +  +  +PI +  G K A+E  + I+   +  + +V   +L++ + ILTKE
Sbjct: 560 ERVGSKFSDSDLIGLPIRVTVGKK-AAEGIVEIKIKATGDSIEVNAENLIETLEILTKE 617


>gi|145594337|ref|YP_001158634.1| prolyl-tRNA synthetase [Salinispora tropica CNB-440]
 gi|189083512|sp|A4X5V6|SYP_SALTO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|145303674|gb|ABP54256.1| prolyl-tRNA synthetase [Salinispora tropica CNB-440]
          Length = 595

 Score =  116 bits (291), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 38/182 (20%), Positives = 78/182 (42%), Gaps = 11/182 (6%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
            SE   H+ L R   L  +   G G+  +   GW+  + + + +R +++    +E++ P 
Sbjct: 17  RSESEGHQLLQRAAMLRQV---GQGIFAYLPLGWRTIRKIEAVLRAELERVGGQEVSMPV 73

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           V    LW+Q+G + +    +   +      +  R   L   +      +    ++SYR L
Sbjct: 74  VNPAELWKQTGRYFTIGPELARFRD-----RRGRDLVLAMTHEELVTFLGRSEIESYRHL 128

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI-HNLIISIYKD 417
           P  + +  + +R++P     GL+RVR F   DA+ F           +  +   ++I++ 
Sbjct: 129 PRMVFQLQTKFRDDPRPR-AGLIRVREFVMKDAYSFDVDAAGLAARYRAQYQAYLTIFRR 187

Query: 418 FG 419
            G
Sbjct: 188 CG 189



 Score = 86.4 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 68/163 (41%), Gaps = 10/163 (6%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF----K 543
           R  + G I  +     +   A Y+++  ++  P+ +     G + R +  + E       
Sbjct: 410 RGVEVGQIFKLGTRYSTALGAEYLDADGQRK-PLTMGCYGIG-VGRLLACLAEEHRDERG 467

Query: 544 GNLPLWLSPIQAIVTTITS---SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
             LP+ ++P Q  +T +     +A E A+ + + L +  + +  D R+E    K  +  +
Sbjct: 468 LRLPVTIAPYQVHLTLLDDLASAAGELARRVYDELWAAGVEVLFDDRDERAGVKFADADV 527

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             +P+ +  G +  +  +  +R   +  T +V   + +  L +
Sbjct: 528 IGLPLRVTIGRRSVANGAAEVRDRATGVTAQVPFDEVVAELVR 570


>gi|149198845|ref|ZP_01875887.1| prolyl-tRNA synthetase [Lentisphaera araneosa HTCC2155]
 gi|149138043|gb|EDM26454.1| prolyl-tRNA synthetase [Lentisphaera araneosa HTCC2155]
          Length = 577

 Score =  116 bits (291), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 39/199 (19%), Positives = 87/199 (43%), Gaps = 11/199 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++    +     ++++   H  L R   +  ++   +G+        ++   + + +R +
Sbjct: 4   SKLVGKRVKEAPKDAQSASHIFLMRGGYIRPVS---TGIYTLLPLAKRMTTKIENIIREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++  D +EI  P V    +WQ+SG +DS   ++   K      ++ +   L   +     
Sbjct: 61  MEAVDCQEIMMPVVNPAEIWQESGRYDSVDQSLLRFKD-----RNQKDMVLAMTHEEAVC 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    + SY++LP  + +  + YR+E   +  GL+RVR FT  DA+ F   E+  ++  
Sbjct: 116 HMARTEITSYKQLPASVYQIQTKYRDEAR-ARAGLIRVREFTMKDAYSFHDSEKCLSDYY 174

Query: 406 -KIHNLIISIYKDFGFEKI 423
            ++H     I++  G    
Sbjct: 175 DRVHQAYERIFERVGLSDC 193



 Score = 76.7 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 22/154 (14%), Positives = 56/154 (36%), Gaps = 9/154 (5%)

Query: 497 QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN----FKGNLPLWLSP 552
           Q+           Y++ + +   P M    +   + R +  + E     +    P+ ++P
Sbjct: 416 QLGTKYSDSMGVRYLDKNGKAQIPTMGCYGI--GVGRALASVCEQRNDKWGPVWPISIAP 473

Query: 553 IQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIIC 609
            Q  V  +T       E A+E+   L+   + +  D R+    +   +  +  +P+ +I 
Sbjct: 474 YQVHVIALTGGQPEIKEEAEELYKNLQKEGIEVIFDDRDPKPGFAFNDADLIGVPLRLII 533

Query: 610 GDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             K  ++ S   +    +  + +   +A   +  
Sbjct: 534 SKKSMAQDSYEFKTRDGSEKELIPKAEAFEFIVN 567


>gi|15618411|ref|NP_224696.1| prolyl-tRNA synthetase [Chlamydophila pneumoniae CWL029]
 gi|16752543|ref|NP_444805.1| prolyl-tRNA synthetase [Chlamydophila pneumoniae AR39]
 gi|33241851|ref|NP_876792.1| prolyl-tRNA synthetase [Chlamydophila pneumoniae TW-183]
 gi|13633970|sp|Q9Z851|SYP_CHLPN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|4376787|gb|AAD18640.1| Prolyl tRNA Synthetase [Chlamydophila pneumoniae CWL029]
 gi|7189180|gb|AAF38117.1| prolyl-tRNA synthetase [Chlamydophila pneumoniae AR39]
 gi|33236360|gb|AAP98449.1| prolyl-tRNA synthetase [Chlamydophila pneumoniae TW-183]
          Length = 568

 Score =  116 bits (291), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 40/217 (18%), Positives = 91/217 (41%), Gaps = 9/217 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q          + +    +  L +   LF +++   GV  +    W++   +++ +R 
Sbjct: 3   TSQLFYKTSKNANKSAAVLSNELLEKAGYLFKVSK---GVYTYTPLLWRVVSKMMNIIRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +E+  P + +  LWQ +G W+++ +        D   ++ ++  L P +    
Sbjct: 60  ELNAIGGQELLLPLLHNAELWQHTGRWEAFTSEGLLYTLKD---REGKSHCLAPTHEEVI 116

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNE 403
            +     L S R+LP+ L +  + +R+E      GL+R R    +D++ F  + EQM  +
Sbjct: 117 CSFVAQWLSSKRQLPLHLYQIATKFRDEIRPRF-GLIRSRELLMEDSYTFSDSPEQMNEQ 175

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
             K+ +    I+   G   ++V        +  S+  
Sbjct: 176 YEKLRSAYSKIFDRLGLAYVIVTADGGKIGKGKSEEF 212



 Score = 64.0 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 34/157 (21%), Positives = 59/157 (37%), Gaps = 9/157 (5%)

Query: 489 RDWQCGTIQVDFNLPSRF-NAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN- 545
           R +Q   +   FNL +R+ ++F VN   E           +G  + R +   +E    + 
Sbjct: 404 RIYQGIEVAHIFNLGTRYTDSFEVNFQDEHGQTQQCWMGTYGIGVGRTLAACVEQLADDR 463

Query: 546 ---LPLWLSPIQAIVTTITSS--AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
               P  L+P    +        + E A+ I + L+S       D R+E + +K+++  +
Sbjct: 464 GIVWPKALAPFSITIAFNGGDTVSQELAETIYHELQSQGYEPLLDDRDERLGFKLKDSDL 523

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
             IP  +I G    S     I    S     VS    
Sbjct: 524 IGIPYKLILGKSYQSSGIFEIESR-SGEKYTVSPEAF 559


>gi|15836031|ref|NP_300555.1| prolyl-tRNA synthetase [Chlamydophila pneumoniae J138]
 gi|8978870|dbj|BAA98706.1| prolyl tRNA synthetase [Chlamydophila pneumoniae J138]
          Length = 568

 Score =  116 bits (291), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 40/217 (18%), Positives = 91/217 (41%), Gaps = 9/217 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q          + +    +  L +   LF +++   GV  +    W++   +++ +R 
Sbjct: 3   TSQLFYKTSKNANKSAAVLSNELLEKAGYLFKVSK---GVYTYTPLLWRVVSKMMNIIRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +E+  P + +  LWQ +G W+++ +        D   ++ ++  L P +    
Sbjct: 60  ELNAIGGQELLLPLLHNAELWQHTGRWEAFTSEGLLYTLKD---REGKSHCLAPTHEEVI 116

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNE 403
            +     L S R+LP+ L +  + +R+E      GL+R R    +D++ F  + EQM  +
Sbjct: 117 CSFVAQWLSSKRQLPLHLYQIATKFRDEIRPRF-GLIRSRELLMEDSYTFSDSPEQMNEQ 175

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
             K+ +    I+   G   ++V        +  S+  
Sbjct: 176 YEKLRSAYSKIFDRLGLAYVIVTADGGKIGKGKSEEF 212



 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 34/157 (21%), Positives = 59/157 (37%), Gaps = 9/157 (5%)

Query: 489 RDWQCGTIQVDFNLPSRF-NAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE----NF 542
           R +Q   +   FNL +R+ ++F VN   E           +G  + R +   +E    + 
Sbjct: 404 RIYQGIEVAHIFNLGTRYTDSFEVNFLDEHGQTQQCWMGTYGIGVGRTLAACVEQLPDDR 463

Query: 543 KGNLPLWLSPIQAIVTTITSS--AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
               P  L+P    +        + E A+ I + L+S       D R+E + +K+++  +
Sbjct: 464 GIVWPKALAPFSITIAFNGGDTVSQELAETIYHELQSQGYEPLLDDRDERLGFKLKDSDL 523

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
             IP  +I G    S     I    S     VS    
Sbjct: 524 IGIPYKLILGKSYQSSGIFEIESR-SGEKYTVSPEAF 559


>gi|317010519|gb|ADU84266.1| prolyl-tRNA synthetase [Helicobacter pylori SouthAfrica7]
          Length = 577

 Score =  116 bits (291), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 45/217 (20%), Positives = 87/217 (40%), Gaps = 11/217 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++          +++  + H+ LA+   ++ I   GSG+  +     K+   + +   +
Sbjct: 3   FSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQI---GSGIYNFLPLAKKVLDKIENITHK 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++++   + I    V+   LW++SG  D Y   +   K   D       F L P      
Sbjct: 60  RMQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKDN-----DFVLSPTLEENI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
             +  + +KSY++LPV L +  + +R+E      GL+R R F   D + F    E +  E
Sbjct: 115 TEIAANFIKSYKQLPVHLYQIHTKFRDEIRPRF-GLVRAREFIMKDGYSFHEDAESLDEE 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            L   +    I  D G +  +V+  +       S   
Sbjct: 174 FLNTQSAYKEILNDLGLDFRIVEADSGAIGGNKSKEF 210



 Score = 62.9 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 19/164 (11%), Positives = 51/164 (31%), Gaps = 8/164 (4%)

Query: 487 IGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
             +  + G I  +         A +++ +  K     +     G       I+ +     
Sbjct: 410 YHKSLEVGHIFKLGQGYAKSLKASFLDKNG-KEQFFEMGCYGIGISRLLSAILEQKSDDL 468

Query: 546 LPLWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
             +W    +P   ++        +  + A E+   L    + +  D R+     K+R+  
Sbjct: 469 GCVWTKNTAPFDVVIVVSNLKDEAQKKLAFEVYERLLQKGVDVLLDDRDARFGAKMRDFE 528

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +    + +I G +    R     +  +   Q +   +    + +
Sbjct: 529 LIGERLALIVGKQTLESREFECIKRANLEKQTLKDTELEEKILE 572


>gi|312863998|ref|ZP_07724234.1| proline--tRNA ligase [Streptococcus vestibularis F0396]
 gi|322517545|ref|ZP_08070414.1| proline--tRNA ligase [Streptococcus vestibularis ATCC 49124]
 gi|311100411|gb|EFQ58618.1| proline--tRNA ligase [Streptococcus vestibularis F0396]
 gi|322123805|gb|EFX95379.1| proline--tRNA ligase [Streptococcus vestibularis ATCC 49124]
          Length = 620

 Score =  116 bits (291), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 37/192 (19%), Positives = 81/192 (42%), Gaps = 10/192 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  ++    G+  +     +  +   + MR +
Sbjct: 4   SKMLIPTLREMPSDAQVISHALMVRAGYVRQVSA---GIYAYMPLANRAIEKFKTIMREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +     E+  P +L   LW++SG +++Y  +++ +K      +D   F L P +     
Sbjct: 61  FEKIGAVEMLAPALLTADLWRESGRYETYGEDLYKLKN-----RDKSDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           A+    +KSY++LP+ L +  S YR+E     +GL+R R F   DA+ F    +  +   
Sbjct: 116 ALVRDAVKSYKQLPLNLYQIQSKYRDEKRPR-NGLLRTREFIMKDAYSFHQNYEDLDVTY 174

Query: 406 KIHNLIISIYKD 417
           + +         
Sbjct: 175 EDYRKAYEAIFT 186



 Score = 68.3 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/175 (20%), Positives = 64/175 (36%), Gaps = 24/175 (13%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S      V   + +  P+++     G   R +  +IE        
Sbjct: 441 RGIEIGHIFKLGTRYSESMGANVLDENGRAVPIIMGCYGIGVS-RILSAVIEQHARLFVN 499

Query: 542 ----------FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSH----HLSIETDFR 587
                     +  N P  L+P    + T+ +   E A  + + L+S        +  D R
Sbjct: 500 KTPKGQYRYAWGINFPKELAPYDVHLITVNTKDEE-ANALTDRLESALAAEGYDVLIDDR 558

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           NE +  K  +  +  +PI +  G K ASE  + ++   +  T +V+  + I  L 
Sbjct: 559 NERVGSKFSDSDLIGLPIRVTVGKK-ASEGVVEVKIKATGDTIEVNADNLIETLA 612


>gi|317177054|dbj|BAJ54843.1| prolyl-tRNA synthetase [Helicobacter pylori F16]
          Length = 577

 Score =  116 bits (291), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 44/217 (20%), Positives = 88/217 (40%), Gaps = 11/217 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++          +++  + H+ LA+   ++ +   GSG+  +     K+   + +   +
Sbjct: 3   FSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQV---GSGIYNFLPLAKKVLDKIENITHK 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++++   + I    V+   LW++SG  D Y   +   K   D       F L P      
Sbjct: 60  RMQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKDN-----DFVLSPTLEENI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
             +  + +KSY++LPV L +  + +R+E      GL+R R F   D + F    E +  E
Sbjct: 115 TEIAANFIKSYKQLPVHLYQIHTKFRDEIRPRF-GLVRAREFIMKDGYSFHEDAESLDKE 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            L + +    I  D G +  +V+  +       S   
Sbjct: 174 FLNMQSAYKEILSDLGLDFRIVEADSGAIGGSKSREF 210



 Score = 62.9 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 18/164 (10%), Positives = 50/164 (30%), Gaps = 8/164 (4%)

Query: 487 IGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
             +  + G I  +         A +++ +  K     +     G       I+ +     
Sbjct: 410 YHKSLEVGHIFKLGQGYAKSLKASFLDKNG-KERFFEMGCYGIGISRLLSAILEQKSDDL 468

Query: 546 LPLWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
             +W    +P   ++        +  + A E+   L    +    D R+     K+R+  
Sbjct: 469 GCVWTKNTAPFDVVIVVSNWKDEAQKKLAFEVYERLHQKGVDALLDDRDARFGAKMRDFE 528

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +    + +I G +    +     +  +   Q +   +    + +
Sbjct: 529 LIGERLALIVGKQTLESKEFECIKRANLEKQTLKDTELEEKILE 572


>gi|322373816|ref|ZP_08048351.1| proline--tRNA ligase [Streptococcus sp. C150]
 gi|321277188|gb|EFX54258.1| proline--tRNA ligase [Streptococcus sp. C150]
          Length = 620

 Score =  116 bits (291), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 36/192 (18%), Positives = 80/192 (41%), Gaps = 10/192 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  ++    G+  +     +  +   + MR +
Sbjct: 4   SKMLIPTLREMPSDAQVISHALMVRAGYVRQVSA---GIYAYMPLANRAIEKFKAIMREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +     E+  P +L   LW++SG +++Y  +++ +K      +D   F L P +     
Sbjct: 61  FEKIGAVEMLAPALLTADLWRESGRYETYGEDLYKLKN-----RDKSDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           A+    +KSY++LP+ L +  S YR+E     +GL+R R F   D + F    +  +   
Sbjct: 116 ALVRDAVKSYKQLPLNLYQIQSKYRDEKRPR-NGLLRTREFIMKDGYSFHQNYEDLDVTY 174

Query: 406 KIHNLIISIYKD 417
           + +         
Sbjct: 175 EDYRKAYEAIFT 186



 Score = 67.1 bits (162), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 34/174 (19%), Positives = 62/174 (35%), Gaps = 22/174 (12%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S      V   + +  P+++     G   R +  +IE        
Sbjct: 441 RGIEIGHIFKLGTRYSESMGANVLDENGRAVPIIMGCYGIGVS-RILSAVIEQHARLFVN 499

Query: 542 ----------FKGNLPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRN 588
                     +  N P  L+P    + T+      A    + +   L +    + TD RN
Sbjct: 500 KTPKGQYRYAWGINFPKDLAPYDVHLITVNTKDEEATALTERLEAALMAEGYDVLTDDRN 559

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           E +  K  +  +  +PI +  G K ASE  + ++   +  T +V+  + I  L 
Sbjct: 560 ERVGSKFSDSDLIGLPIRVTVGKK-ASEGVVEVKIKATGDTIEVNADNLIETLA 612


>gi|228476457|ref|ZP_04061147.1| prolyl-tRNA synthetase [Streptococcus salivarius SK126]
 gi|228251878|gb|EEK10924.1| prolyl-tRNA synthetase [Streptococcus salivarius SK126]
          Length = 621

 Score =  116 bits (291), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 37/192 (19%), Positives = 82/192 (42%), Gaps = 10/192 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  ++       +++   H  + R   +  ++    G+  +     +  +   + MR +
Sbjct: 5   SKMLISTLREMPSDAQVISHALMVRAGYVRQVSA---GIYAYMPLANRAIEKFKTIMREE 61

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +     E+  P +L   LW++SG +++Y  +++ +K      +D   F L P +     
Sbjct: 62  FEKIGAVEMLAPALLTADLWRESGRYETYGEDLYKLKN-----RDKSDFILGPTHEETFT 116

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
           A+    +KSY++LP+ L +  S YR+E     +GL+R R F   DA+ F    +  +   
Sbjct: 117 ALVRDAVKSYKQLPLNLYQIQSKYRDEKRPR-NGLLRTREFIMKDAYSFHQNYEDLDVTY 175

Query: 406 KIHNLIISIYKD 417
           + +         
Sbjct: 176 EDYRKAYEAIFT 187



 Score = 67.9 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 34/174 (19%), Positives = 62/174 (35%), Gaps = 22/174 (12%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S      V   + +  P+++     G   R +  +IE        
Sbjct: 442 RGIEIGHIFKLGTRYSESMGANVLDENGRAVPIIMGCYGIGVS-RILSAVIEQHARLFVN 500

Query: 542 ----------FKGNLPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRN 588
                     +  N P  L+P    + T+      A    + +   L +    + TD RN
Sbjct: 501 KTPKGQYRYAWGINFPKELAPYDVHLITVNTKDEEANALTERLEAALMAEGYDVLTDDRN 560

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           E +  K  +  +  +PI +  G K ASE  + ++   +  T +V+  + I  L 
Sbjct: 561 ERVGSKFSDSDLIGLPIRVTVGKK-ASEGVVEVKIKATGDTIEVNADNLIETLA 613


>gi|195978861|ref|YP_002124105.1| prolyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
 gi|195975566|gb|ACG63092.1| prolyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
          Length = 613

 Score =  116 bits (291), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 35/190 (18%), Positives = 75/190 (39%), Gaps = 10/190 (5%)

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK 288
             +        +++   H  + R   +  ++    G+  +     +  +   + MR++  
Sbjct: 1   MLIPTLREMPSDAQVISHALMVRAGYVRQVSA---GIYAYLPLAHRTIEKFKTIMRQEFD 57

Query: 289 D-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
                E+  P +L   LW++SG +++Y  +++ +K      +D   F L P +      +
Sbjct: 58  KIGAVEMLAPALLTADLWRESGRYETYGEDLYKLKN-----RDKSDFILGPTHEETFTTL 112

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
               +KSY++LP+ L +  S YR+E     +GL+R R F   D + F       +     
Sbjct: 113 VRDAVKSYKQLPLNLYQIQSKYRDEKRPR-NGLLRTREFIMKDGYSFHQSYDDLDVTYDA 171

Query: 408 HNLIISIYKD 417
           +         
Sbjct: 172 YRQAYEAIFT 181



 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/180 (20%), Positives = 72/180 (40%), Gaps = 25/180 (13%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S   A  +   + +  P+++     G   R +  +IE        
Sbjct: 436 RGIEIGHIFKLGTRYSDSMAANILDENGRAVPIVMGCYGIGVS-RILSAVIEQHARLFVS 494

Query: 542 ----------FKGNLPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRN 588
                     +  N P  L+P    + T+      A +  +++   L +    + TD RN
Sbjct: 495 KTPKGDYRYAWGINFPKELAPFDVHLITVNVKDQEAQDLTEKVEASLMAKGYDVLTDDRN 554

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV---SLLDAIPILTKES 645
           E +  K  +  +  +PI +  G K A+E  + I+   +  + +V   SL++ + ILTK++
Sbjct: 555 ERVGSKFSDSDLIGLPIRVTIGKK-AAEGIVEIKIKATGDSIEVHADSLIETLDILTKDN 613


>gi|55820298|ref|YP_138740.1| prolyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
 gi|55822188|ref|YP_140629.1| prolyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
 gi|81820361|sp|Q5M1N3|SYP_STRT1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|81820523|sp|Q5M674|SYP_STRT2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|55736283|gb|AAV59925.1| prolyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
 gi|55738173|gb|AAV61814.1| prolyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
          Length = 620

 Score =  116 bits (290), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 36/192 (18%), Positives = 80/192 (41%), Gaps = 10/192 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +        +++   H  + R   +  ++    G+  +     +  +   + MR +
Sbjct: 4   SKMLIPTLREMPSDAQVISHALMVRAGYVRQVSA---GIYAYMPLANRAIEKFKTIMREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +     E+  P +L   LW++SG +++Y  +++ +K      +D   F L P +     
Sbjct: 61  FEKIGAVEMLAPALLTADLWRESGRYETYGEDLYKLKN-----RDKSDFILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    +KSY++LP+ L +  S YR+E     +GL+R R F   DA+ F    +  +   
Sbjct: 116 VLVRDAVKSYKQLPLNLYQIQSKYRDEKRPR-NGLLRTREFIMKDAYSFHQNYEDLDVTY 174

Query: 406 KIHNLIISIYKD 417
           + +         
Sbjct: 175 EDYRKAYEAIFT 186



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/175 (19%), Positives = 64/175 (36%), Gaps = 24/175 (13%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S      V   + +  P+++     G   R +  +IE        
Sbjct: 441 RGIEIGHIFKLGTRYSESMGANVLDENGRAVPIIMGCYGIGVS-RILSAVIEQHARLFVN 499

Query: 542 ----------FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSH----HLSIETDFR 587
                     +  N P  L+P    + T+ +   E A  + + L++        +  D R
Sbjct: 500 KTPKGQYRYAWGINFPKELAPYDVHLITVNTKDEE-ANALTDRLEAALAAEGYDVLIDDR 558

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           NE +  K  +  +  +PI +  G K ASE  + ++   +  T +V+  + I  L 
Sbjct: 559 NERVGSKFSDSDLIGLPIRVTVGKK-ASEGVVEVKIKATGDTIEVNADNLIETLA 612


>gi|329942565|ref|ZP_08291375.1| prolyl-tRNA synthetase [Chlamydophila psittaci Cal10]
 gi|332287196|ref|YP_004422097.1| prolyl-tRNA synthetase [Chlamydophila psittaci 6BC]
 gi|313847792|emb|CBY16782.1| prolyl-tRNA synthetase [Chlamydophila psittaci RD1]
 gi|325506498|gb|ADZ18136.1| prolyl-tRNA synthetase [Chlamydophila psittaci 6BC]
 gi|328815475|gb|EGF85463.1| prolyl-tRNA synthetase [Chlamydophila psittaci Cal10]
 gi|328914444|gb|AEB55277.1| prolyl-tRNA synthetase [Chlamydophila psittaci 6BC]
          Length = 577

 Score =  116 bits (290), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 40/218 (18%), Positives = 92/218 (42%), Gaps = 9/218 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q          +E+    +  L +   +F  A+   G+  +    W++ + ++  +R 
Sbjct: 3   TSQLFYKTSKNANKEASVLSYELLEKAGYIFKTAK---GIYTYTPLFWRVARKMMEIIRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +E+  P +    LWQ++G W+++R+        D   ++ + F L P +    
Sbjct: 60  ELNAIGGQELVLPILHPAELWQKTGRWEAFRSEGLLYTLKD---REDKEFCLAPTHEEIV 116

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNE 403
               +  L   + LP+ L +  + +R+E      GLMR + F  +D++ F  + EQM  +
Sbjct: 117 SLFVSQWLSGRKHLPLHLYQIATKFRDEIRPRF-GLMRAKEFLMEDSYTFSDSPEQMNKQ 175

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALW 441
             K+     +I+     + ++V+       +  S+   
Sbjct: 176 YAKLRQAYQNIFDRLDIQYVIVEADGGKIGKGKSEEFH 213



 Score = 66.7 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/144 (23%), Positives = 59/144 (40%), Gaps = 11/144 (7%)

Query: 500 FNLPSRF-NAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN----LPLWLSPI 553
           FNL +R+   F V    E+  P       +G  I R +   IE    +     P  ++P 
Sbjct: 415 FNLGTRYTECFEVVFQDEQGKPQSCWMGTYGIGIGRTLAACIEQLADDRGIVWPKAIAPF 474

Query: 554 QAIVTTITSSA--VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
              +      A   E A++I   L+ H  +   D RNE + +K+++  +  IP  +I G 
Sbjct: 475 DITILYNGGDATCEEAAEKIYKELQCHGYAPLLDDRNERLGFKLKDSDLIGIPYKLILGK 534

Query: 612 KEASERSIGIRRFGSTTTQKVSLL 635
              +   + I    S + +K S+ 
Sbjct: 535 TFLNSGMLEI---ESRSIEKFSVE 555


>gi|224373093|ref|YP_002607465.1| prolyl-tRNA synthetase [Nautilia profundicola AmH]
 gi|254782910|sp|B9LA07|SYP_NAUPA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|223588823|gb|ACM92559.1| prolyl-tRNA synthetase [Nautilia profundicola AmH]
          Length = 574

 Score =  116 bits (290), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 56/285 (19%), Positives = 100/285 (35%), Gaps = 15/285 (5%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
            H+ L R   +  +A    G+  +   G  +   +   +++++     +E+    V    
Sbjct: 22  SHKYLVRGGYIKQVAA---GIYDFAPLGKMVLDNIRDIIKKEMDASGAQEVMLTFVTPNE 78

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
           LW+++G    Y   +  +K   D     ++F L P N    V +    +KSY++LPV L 
Sbjct: 79  LWEETGRAKKYGKELLRIKDRKD-----QSFVLAPTNEESVVDLVRGTIKSYKQLPVNLY 133

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKDFGFEK 422
           +    +R+E      GL+R R F   DA+ F  T+E +  E   +     +I+   G + 
Sbjct: 134 QINLKFRDEARPRF-GLLRGREFIMKDAYSFHATEEDLDREFNLMEETYKNIFTKLGLDF 192

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF--- 479
             V   +      GS      A+     ++   +      I       E      K    
Sbjct: 193 RAVWADSGAIGGSGSKEFMVLADTGEDDIVVCSECDYAANIEVATRKHEKRENPVKTEVI 252

Query: 480 -EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
            E    D    +  C  I VD     +           K   V+ 
Sbjct: 253 EEVHTPDMKSIEDVCNFIGVDPYFSIKAVVKKAIYDDGKSEIVVF 297



 Score = 81.4 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 29/174 (16%), Positives = 60/174 (34%), Gaps = 9/174 (5%)

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
            PK    LK   G +      ++        NA +++ +  K  P ++     G      
Sbjct: 400 CPKCGAPLKITKGIEV-GHIFKLGTVYSEPMNATFLDENG-KAKPFIMGCYGIGVSRLIS 457

Query: 536 GIMIENFKGNLPLWLSPIQAIVT------TITSSAVEYAQEIANLLKSHHLSIETDFRNE 589
             + +N      +W   I   V             + +A+++ + L S  +    D R E
Sbjct: 458 AAIEQNHDDKGIIWPKQIAPFVVDIIVGDVKKDEQLIFAEDLYDKLTSAGVKTILDDRAE 517

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
               KI +  +   P+ +I G K   +  + +R   +    +V    A+  + +
Sbjct: 518 RFGPKIADFELVGFPVCVIVGKK-LKDGKVEVRDRRTGEKFEVEKDMALEKVME 570


>gi|319759028|gb|ADV70970.1| prolyl-tRNA synthetase [Streptococcus suis JS14]
          Length = 615

 Score =  116 bits (290), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 42/245 (17%), Positives = 93/245 (37%), Gaps = 16/245 (6%)

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEE 293
                ++    H  + R   +  I+    G+  +     ++ +   + MR +    D  E
Sbjct: 7   REMPSDASVISHALMLRAGYVRQISA---GIYSYLPLANRVIEKAKNIMREEFDKIDAIE 63

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
              P +L   +W++SG +++Y  +++ +K      ++   F L P +      +    ++
Sbjct: 64  FLAPALLSADIWRESGRYETYGDDLYKLKN-----REGSDFILGPTHEETVTLLARDAVQ 118

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SY++LP+ + +    YR+E     +GL+R R F   D + F    +  ++    +     
Sbjct: 119 SYKQLPLNIYQIQPKYRDEKRPR-NGLLRGREFIMKDGYSFHASYESLDQTYDDYKAAYE 177

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSD-----ALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
                   +    +        G D     A+  D  ++ + V+     +S + I   VL
Sbjct: 178 AIFTRAGLEFKAIIGDGGAMG-GKDSQEFMAITPDRTDLDRWVVLDKSVASFEEIPEDVL 236

Query: 469 LGEGA 473
               A
Sbjct: 237 EAFKA 241



 Score = 72.9 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/179 (20%), Positives = 69/179 (38%), Gaps = 23/179 (12%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S      +   + +  P+++     G       ++ ++       
Sbjct: 437 RGIEIGHIFKLGTRYSDSMNANILDENGRSMPIIMGCYGIGVSRLLSAVLEQHARLFVNK 496

Query: 542 ---------FKGNLPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNE 589
                    +  N P  L+P    +  +     +A+E  Q I   L      + TD RNE
Sbjct: 497 TPKGEYRYAWGINFPKELAPFDVHLIPVNVKDEAAMELTQSIEASLVGAGYEVLTDDRNE 556

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV---SLLDAIPILTKES 645
            +  K  +  +  +PI +  G K A++  + ++  G+  T +V    LL+ + ILTKE+
Sbjct: 557 RVGVKFSDSDLIGLPIRVTVGKK-AADGIVEVKIKGTGDTVEVHVDQLLETLQILTKEN 614


>gi|225570460|ref|ZP_03779485.1| hypothetical protein CLOHYLEM_06561 [Clostridium hylemonae DSM
           15053]
 gi|225160657|gb|EEG73276.1| hypothetical protein CLOHYLEM_06561 [Clostridium hylemonae DSM
           15053]
          Length = 555

 Score =  116 bits (290), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 42/197 (21%), Positives = 79/197 (40%), Gaps = 5/197 (2%)

Query: 14  IKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAV 72
           IK +    T   +A+   +      V V +NG++ +L   +  +  I  +T  D      
Sbjct: 14  IKRYERGTTYERIAQEYQKDYPYDIVLVFVNGRLQELYKTLNSDAVISFVTTADNIGHKT 73

Query: 73  IRHSCAHIMAEAVQSIWPE---VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
            + S + ++ +AV  +       +V I   +  G+Y   + +   + + L ++E +M E+
Sbjct: 74  YKRSMSLMLVKAVYDVANHEAIDKVRIHYAVSKGYYCTIEGDIELNEEFLDKVEARMYEM 133

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
           +  + P  K+ +  + A  LF       K E L        V +Y   E+ D   G  V 
Sbjct: 134 VEMNMPIQKRSIHTDDAVALFRQHGMRDK-ERLFEYRRVSKVNIYSMNEFEDYYYGYMVP 192

Query: 190 STGQVKKFFKLMKVAGA 206
           S G +K F   +   G 
Sbjct: 193 SAGYLKYFKLYLYDEGF 209


>gi|270002317|gb|EEZ98764.1| hypothetical protein TcasGA2_TC001328 [Tribolium castaneum]
          Length = 351

 Score =  116 bits (290), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 66/351 (18%), Positives = 127/351 (36%), Gaps = 25/351 (7%)

Query: 217 LSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIF 276
           L R+                   +   +  R +    +L  I +   G   +   G K  
Sbjct: 6   LHRLSRLFQPVSVVPKNAEVKRHDITSKSQRLML---ELGIIRQASPGCFHFLPLGVKSL 62

Query: 277 QTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFA 335
           + L   +  ++K    ++I  P + +  LW+++G  ++  + +F +K   D     +++ 
Sbjct: 63  EKLTRLVDEEMKKIGGQKIIFPTLTNAKLWEKTGRLETVSSELFQIKDRHD-----QSYI 117

Query: 336 LKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           L P +      +       SY+ LP++L +  S YR+E      GLMR + F   D + F
Sbjct: 118 LSPTHEEAASNLLASLAPISYKHLPLKLYQITSKYRDEMKPRF-GLMRGKQFLMKDMYSF 176

Query: 395 CTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
            T  E   +   +I      I++  G + + V   +       S      A+     +L 
Sbjct: 177 DTDLETAKHTYDEICKSYDRIFRRIGIDFVKVVGCSGHMGGELSHEYHYKADVGEDKILT 236

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS 513
             K +     NT V   E           +   +G +    T  +        NA ++N+
Sbjct: 237 CNKCNYSA--NTEVSGEEKCPNCGNTSVKI--HLGIEV-GHTFLLGEKYSKPLNATFLNN 291

Query: 514 HSEKCHPVMIHRAVFG-SIERFIGIMIENF----KGNLPLWLSPIQAIVTT 559
           H +   P ++    +G  + R +  +IE      +   P  LSP   I+  
Sbjct: 292 HGK---PDVLQMGSYGLGLSRILAAVIEVMSSEQEIRWPQILSPYSVIILP 339


>gi|226366073|ref|YP_002783856.1| prolyl-tRNA synthetase [Rhodococcus opacus B4]
 gi|254782912|sp|C1B2Z4|SYP_RHOOB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226244563|dbj|BAH54911.1| prolyl-tRNA synthetase [Rhodococcus opacus B4]
          Length = 581

 Score =  116 bits (290), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 48/251 (19%), Positives = 96/251 (38%), Gaps = 22/251 (8%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +  IA    GV  W   G ++ + +   +R ++     +EI+ P 
Sbjct: 19  DAEVPSHKLLVRAGYVRRIA---PGVYSWLPLGLRVLREVERVVREEMNGIGAQEISLPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++ S  W  Y   +F +K      +    + L P +             SY++ 
Sbjct: 76  LLPREPYEASNRWTEYGEGLFRLKD-----RKGGDYLLGPTHEELFALTVKGEYNSYKDF 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKD 417
           PV L +  + YR+E      G++R R F   D++ F   ++   E  + H      I+  
Sbjct: 131 PVTLYQVQTKYRDEERPR-AGILRGREFVMKDSYSFDLTDEGLTESYRAHRDAYERIFAR 189

Query: 418 FGFEKIMVKLSTRPE-----------KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
            G + ++V  ++                +G D      E+     ++ +K  + + I   
Sbjct: 190 LGVKYVIVSATSGAMGGSASEEFLAESEIGEDTYVRCLESGYAANVEAVKTLAPEPIPFD 249

Query: 467 VLLGEGAFYGP 477
            L     +  P
Sbjct: 250 GLPAAKVYDTP 260



 Score = 58.6 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/174 (13%), Positives = 57/174 (32%), Gaps = 34/174 (19%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNL 546
           R  + G + Q+       F+   +  + +   P M    V   + R + ++ E +     
Sbjct: 419 RGIEIGHVFQLGRKYTDVFSVDVLGENGKPVRPTMGSYGV--GVSRLVAVIAEQHHDDKG 476

Query: 547 PLWLSP-----IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             W +      +  ++     +A E A+ +A  L    L +  D R  +   K ++  + 
Sbjct: 477 LRWPAEVSPADVHVVIANKDDTAREGAEGLAADLDKAGLEVILDDRKASPGVKFKDSELL 536

Query: 602 ------------KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
                                     E  + +R   +  +++V+   A+  + K
Sbjct: 537 GVPLVVVVGRGWG-------------EGKVEVRDRFTGESREVAAESALSEIVK 577


>gi|291563085|emb|CBL41901.1| Uridine kinase [butyrate-producing bacterium SS3/4]
          Length = 570

 Score =  116 bits (290), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 40/194 (20%), Positives = 77/194 (39%), Gaps = 5/194 (2%)

Query: 11  DGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRS 69
           +G  +++    T  ++A+          + V +NGK+ +L   +  +  I  IT ++   
Sbjct: 26  NGIERSYQEGTTYLEIAKDFQDQYENDILLVRVNGKLRELEKTLAGDSEISFITAKENAG 85

Query: 70  LAVIRHSCAHIMAEAVQSIWPE---VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKM 126
                 S   +M +A   + P     ++ I   + +G Y +   +     + L  ++  M
Sbjct: 86  YKTYERSAIFLMLKAFYEVIPREKIRKIQIDFALGNGIYGELVGDITVDEELLTSVKAHM 145

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGP 186
           +++     P  K+ ++ + A ELF       K E L        V +Y  GE+ D   G 
Sbjct: 146 EKLRDAAIPVKKRSVNTDDAVELFGKHGMHDK-EQLFQYRRASRVNIYSIGEFEDYFYGY 204

Query: 187 HVRSTGQVKKFFKL 200
            V  T  VK F  +
Sbjct: 205 MVPDTSYVKYFDLV 218


>gi|291166156|gb|EFE28202.1| phosphoribulokinase family protein [Filifactor alocis ATCC 35896]
          Length = 542

 Score =  116 bits (289), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 38/190 (20%), Positives = 71/190 (37%), Gaps = 1/190 (0%)

Query: 39  VAVAINGKVCDLSDPVRE-GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIG 97
           +A  +N  +  LS  V E   I  +   D     +   S   +   A + I     V + 
Sbjct: 26  LAAKVNNNLYPLSYEVEEEAEITFLDITDNDGRRIYMTSLTFLFTRAAREILDGAIVIVK 85

Query: 98  PIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAY 157
             +++G Y+D + ++   S  +  IEK+M++++  +    +   + E+A +  +  K + 
Sbjct: 86  HSLQNGIYFDIEYKETLKSTHVRLIEKRMRQLVEENVLIERISYTREEAIKRLQEDKLSS 145

Query: 158 KVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPML 217
               L          +YR G   D   G  V STG +K F+  +   G    G S +   
Sbjct: 146 NNSQLLRYKDSCMTHIYRCGWLQDYYYGYMVPSTGYLKVFYLHLYNHGIVLLGPSEKNPN 205

Query: 218 SRIYGTAWNT 227
                     
Sbjct: 206 KPTGFIPQPK 215


>gi|109947885|ref|YP_665113.1| prolyl-tRNA synthetase [Helicobacter acinonychis str. Sheeba]
 gi|123173273|sp|Q17W62|SYP_HELAH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|109715106|emb|CAK00114.1| proS [Helicobacter acinonychis str. Sheeba]
          Length = 577

 Score =  116 bits (289), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 44/217 (20%), Positives = 86/217 (39%), Gaps = 11/217 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++          +++  + H+ LA+   ++ I   GSG+  +     K+   + +   +
Sbjct: 3   FSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQI---GSGIYNFLPLAKKVLDKIENITHK 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++++   + I    V+   LW++SG  D Y   +   K      +    F L P      
Sbjct: 60  RMQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKD-----RKGNDFVLSPTLEENI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
             +  + +KSY++LPV L +  + +R+E      GL+R R F   D + F    E +  E
Sbjct: 115 TEIAANFIKSYKQLPVHLYQIHTKFRDEIRPRF-GLVRAREFIMKDGYSFHEDAESLDKE 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            L   +    I  D G +  +V+          S   
Sbjct: 174 FLNTQSAYKEILNDLGLDFRIVEADNGAIGGSKSKEF 210



 Score = 60.6 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 18/164 (10%), Positives = 50/164 (30%), Gaps = 8/164 (4%)

Query: 487 IGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
             +  + G I  +         A +++ +  K     +     G       I+ +     
Sbjct: 410 YHKSLEVGHIFKLSQGYAKSLKASFLDKNG-KEQFFEMGCYGIGISRLLSAILEQKSDDL 468

Query: 546 LPLWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
             +W    +P   ++           + A E+   L    + +  D R+     K+R+  
Sbjct: 469 GCVWTKNTAPFDVVIVVSNLKDEVQKKLAFEVYERLLQRGVDVLLDDRDVRFGAKMRDFE 528

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +    + +I G +    +     +  +   Q +   +    + +
Sbjct: 529 LIGERLALIVGKQTLENKEFECIKRANLEKQTLKDRELEEKILE 572


>gi|258593203|emb|CBE69542.1| Prolyl-tRNA synthetase (Proline--tRNA ligase) (ProRS) [NC10
           bacterium 'Dutch sediment']
          Length = 572

 Score =  116 bits (289), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 47/279 (16%), Positives = 93/279 (33%), Gaps = 13/279 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            T+  +        E+E   H+ + R   +  +A    G+      G ++   + + +R 
Sbjct: 3   WTRSLIPTLKEEPAEAEAISHKLMVRAGLVRQLAA---GIYITLPLGQRVMDKISAIIRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++   D +EI  P +    LWQQ+G W +    MF +          R   L   +    
Sbjct: 60  EMNRIDGQEITMPVLHPAELWQQTGRWATIGEEMFRLYDRG-----KRQMCLGMTHEEVV 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    ++SYR+LP    +  +  R+E      G++R R F   D++     +    + 
Sbjct: 115 AWLAAREIRSYRDLPQTWYQIQTKLRDEARPK-SGVLRTREFVMKDSYSLDRDDAGLEKS 173

Query: 405 LKIH-NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            ++H      I+   G     V+          +      +E     +    +      I
Sbjct: 174 YELHKEAYCRIFTRCGLSFHAVESDPGMMGGAVAHEFMAPSEAGEDEIALCDRCGYSANI 233

Query: 464 NTGVLLGEGAFYGP--KFEYILKDAIGRDWQCGTIQVDF 500
              V       +      E     A   +  C  +Q+D 
Sbjct: 234 ELAVSRPRSPVFTTWDLEEIATPGAGTIEEVCRLLQIDP 272



 Score = 73.7 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 23/160 (14%), Positives = 61/160 (38%), Gaps = 8/160 (5%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I ++         A Y++   E  +P+++     G        + ++      
Sbjct: 396 RVIEIGNIFRLGTKYSIPMKAVYLSEAGE-EYPIVMGSYGIGLARIAAAAVEQHHDDLGI 454

Query: 548 LWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W    +P Q  +  +        E A+ + + L+   +    D R+E    K ++  + 
Sbjct: 455 IWPSAIAPFQLHLLPVNMRDQKMAELAEALYSQLQQAGIETLYDDRDERAGVKFKDADLL 514

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            +P+ +  G +   E  + ++   +    ++ L +A+  +
Sbjct: 515 GLPMRMTIGTRTLKEGMVDLKIRKTAKEVQIPLSEAVSTV 554


>gi|116495061|ref|YP_806795.1| prolyl-tRNA synthetase [Lactobacillus casei ATCC 334]
 gi|122263522|sp|Q038L9|SYP_LACC3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|116105211|gb|ABJ70353.1| Prolyl-tRNA synthetase [Lactobacillus casei ATCC 334]
 gi|327382602|gb|AEA54078.1| Prolyl-tRNA synthetase [Lactobacillus casei LC2W]
 gi|327385800|gb|AEA57274.1| Prolyl-tRNA synthetase [Lactobacillus casei BD-II]
          Length = 575

 Score =  116 bits (289), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 41/220 (18%), Positives = 89/220 (40%), Gaps = 11/220 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +         +E + H+ + R   +  I     GV  +     ++   + + +  +
Sbjct: 4   SRMFIPTEKEVPSSAEAKSHKMMLRSGFVRQIQA---GVYAYLPLAERVLARIEAIIDDE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +   D  ++  P +L   LW++SG +++Y  N+F +K   D     R   L P +     
Sbjct: 61  MTKIDAVKMKMPVLLPAELWEESGRYETYGPNLFKLKNRQD-----RKMILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +  + LKSY+ +P+ L +    +R+E     +G++R R F   DA+ F + +Q  +   
Sbjct: 116 DLVRNELKSYKRMPLVLYQIQDKFRDEDRPR-YGVLRGREFIMQDAYSFTSNDQDLDTIY 174

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
           + + +   +I+   G     +           S      A
Sbjct: 175 RQMEHAYTNIFDRLGLRYRSIIGDGGAMGGKDSKEFSAIA 214



 Score = 72.1 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 25/162 (15%), Positives = 56/162 (34%), Gaps = 11/162 (6%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G I  +         A +++ +  +  P+++     G   R +  + E       
Sbjct: 404 RGIEIGHIFKLGTRYTETMGANFLDENG-RSQPIIMGSYGIGVS-RLLSAIAEQQADEHG 461

Query: 546 --LPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              P  ++P    +  +             I  +L+    S+  D RNE    K  +  +
Sbjct: 462 LVWPTTIAPFDIHLIPVNLKREEQKSLTASIETMLEVAGYSVLVDDRNERPGVKFADSDL 521

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             +P+ +  G K   E  + ++   +  T +V   + I  + 
Sbjct: 522 IGVPLRVTVGKKAVDE-IVELKLRKTGETIEVKKEELISSIK 562


>gi|317012082|gb|ADU82690.1| prolyl-tRNA synthetase [Helicobacter pylori Lithuania75]
          Length = 577

 Score =  116 bits (289), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 44/217 (20%), Positives = 87/217 (40%), Gaps = 11/217 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++          +++  + H+ LA+   ++ +   GSG+  +     K+   + +   +
Sbjct: 3   FSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQV---GSGIYNFLPLAKKVLDKIENITHK 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++++   + I    V+   LW++SG  D Y   +   K   D       F L P      
Sbjct: 60  RMQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKDN-----DFVLSPTLEENI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
             +  + +KSY++LPV L +  + +R+E      GL+R R F   D + F    E +  E
Sbjct: 115 TEIAANFIKSYKQLPVHLYQIHTKFRDEIRPRF-GLVRAREFIMKDGYSFHEDAESLDKE 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            L   +    I  D G +  +V+  +       S   
Sbjct: 174 FLNTQSAYKEILSDLGLDFRIVEADSGAIGGSKSREF 210



 Score = 58.6 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 21/166 (12%), Positives = 52/166 (31%), Gaps = 10/166 (6%)

Query: 475 YGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           + P  +  LK    +  + G I  +         A +++ +  K     +     G    
Sbjct: 400 HCPNCQGALK--YHKSLEVGHIFKLGQGYAKSLKASFLDKNG-KERFFEMGCYGIGISRL 456

Query: 534 FIGIMIENFKGNLPLWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFR 587
              I+ +       +W    +P   ++        +  + A E+   L    +    D R
Sbjct: 457 LSAILEQKSDDLGCVWTKNTAPFDVVIVVSNWKDGAQKKLAFEVYERLLQKGVDALLDDR 516

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
           +     K+R+  +    + +I G +    +     +  +   Q + 
Sbjct: 517 DARFGAKMRDFELIGERLALIIGKQTLENKEFECIKRANLEKQTLK 562


>gi|227534928|ref|ZP_03964977.1| prolyl-tRNA synthetase (proline--tRNA ligase) (ProRS)
           [Lactobacillus paracasei subsp. paracasei ATCC 25302]
 gi|227187684|gb|EEI67751.1| prolyl-tRNA synthetase (proline--tRNA ligase) (ProRS)
           [Lactobacillus paracasei subsp. paracasei ATCC 25302]
          Length = 575

 Score =  116 bits (289), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 41/220 (18%), Positives = 89/220 (40%), Gaps = 11/220 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +         +E + H+ + R   +  I     GV  +     ++   + + +  +
Sbjct: 4   SRMFIPTEKEVPSSAEAKSHKMMLRSGFVRQIQA---GVYAYLPLAERVLARIEAIIDDE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +   D  ++  P +L   LW++SG +++Y  N+F +K   D     R   L P +     
Sbjct: 61  MTKIDAVKMKMPVLLPAELWEESGRYETYGPNLFKLKNRQD-----RKMILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +  + LKSY+ +P+ L +    +R+E     +G++R R F   DA+ F + +Q  +   
Sbjct: 116 DLVRNELKSYKRMPLVLYQIQDKFRDEDRPR-YGVLRGREFIMQDAYSFTSNDQDLDTIY 174

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
           + + +   +I+   G     +           S      A
Sbjct: 175 RQMEHAYTNIFDRLGLRYRSIIGDGGAMGGKDSKEFSAIA 214



 Score = 72.1 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 25/162 (15%), Positives = 56/162 (34%), Gaps = 11/162 (6%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G I  +         A +++ +  +  P+++     G   R +  + E       
Sbjct: 404 RGIEIGHIFKLGTRYTETMGANFLDENG-RSQPIIMGSYGIGVS-RLLSAIAEQQADEHG 461

Query: 546 --LPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              P  ++P    +  +             I  +L+    S+  D RNE    K  +  +
Sbjct: 462 LVWPTTIAPFDIHLIPVNLKREEQKSLTASIETMLEVAGYSVLVDDRNERPGVKFADSDL 521

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             +P+ +  G K   E  + ++   +  T +V   + I  + 
Sbjct: 522 IGVPLRVTVGKKAVDE-IVELKLRKTGETIEVKKEELISSIK 562


>gi|301066624|ref|YP_003788647.1| prolyl-tRNA synthetase [Lactobacillus casei str. Zhang]
 gi|300439031|gb|ADK18797.1| Prolyl-tRNA synthetase [Lactobacillus casei str. Zhang]
          Length = 575

 Score =  116 bits (289), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 41/220 (18%), Positives = 89/220 (40%), Gaps = 11/220 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +         +E + H+ + R   +  I     GV  +     ++   + + +  +
Sbjct: 4   SRMFIPTEKEVPSSAEAKSHKMMLRSGFVRQIQA---GVYAYLPLAERVLARIEAIIDDE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +   D  ++  P +L   LW++SG +++Y  N+F +K   D     R   L P +     
Sbjct: 61  MTKIDAVKMKMPVLLPAELWEESGRYETYGPNLFKLKNRQD-----RKMILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +  + LKSY+ +P+ L +    +R+E     +G++R R F   DA+ F + +Q  +   
Sbjct: 116 DLVRNELKSYKRMPLVLYQIQDKFRDEDRPR-YGVLRGREFIMQDAYSFTSNDQDLDTIY 174

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
           + + +   +I+   G     +           S      A
Sbjct: 175 RQMEHAYTNIFDRLGLRYRSIIGDGGAMGGKDSKEFSAIA 214



 Score = 74.4 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 25/162 (15%), Positives = 56/162 (34%), Gaps = 11/162 (6%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G I  +         A +++ +  +  P+++     G   R +  + E       
Sbjct: 404 RGIEIGHIFKLGTRYTETMGANFLDENG-RSQPIIMGSYGIGVS-RLLSAIAEQQADEHG 461

Query: 546 --LPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              P  ++P    +  +             I  +L+    S+  D RNE    K  +  +
Sbjct: 462 LVWPTTIAPFDIHLIPVNLKREEQKSLTASIETMLEDAGYSVLVDDRNERPGVKFADSDL 521

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             +P+ +  G K   E  + ++   +  T +V   + I  + 
Sbjct: 522 IGVPLRVTVGKKAVDE-IVELKLRKTGETIEVKKEELISSIK 562


>gi|261417283|ref|YP_003250966.1| prolyl-tRNA synthetase [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261373739|gb|ACX76484.1| prolyl-tRNA synthetase [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|302327884|gb|ADL27085.1| proline--tRNA ligase [Fibrobacter succinogenes subsp. succinogenes
           S85]
          Length = 564

 Score =  116 bits (289), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 85/198 (42%), Gaps = 11/198 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++           ++    H  L R   +  ++   +G+      G+++ Q +++ +R +
Sbjct: 4   SKYFYVTLRETPSDATMPSHIFLMRGGYIKPVS---TGIYSMMPIGYRVIQKIVNIIREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +      E++ P V    LW +SG + +    +   K  ++         L   +     
Sbjct: 61  MNKIGGIEVDLPVVQTAELWSESGRYQAIGEELLRFKDRNNH-----NMVLAMTHEEAMT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +  + L SY++LPV L +F + YR+E   +  GL+RVR F   DA+ F T  E +    
Sbjct: 116 DLVRYVLNSYKQLPVMLYQFKTKYRDEAR-ARGGLIRVREFLMKDAYSFHTSQEDLDRHY 174

Query: 405 LKIHNLIISIYKDFGFEK 422
            + ++  + IY+  G E 
Sbjct: 175 QEEYDAYLRIYRRVGIEP 192



 Score = 89.8 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 51/130 (39%), Gaps = 7/130 (5%)

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNL-PLWL---SPIQAIVTTITSSA--VEYAQEIAN 573
           P ++     G   R +  ++EN   +  P+W    +P Q  +  I   A  +E A++   
Sbjct: 432 PAIMGCYGIGV-GRLMASVVENSHDDFGPIWPKSIAPFQVEIVPIGKEAELMELAEKFEK 490

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            L++  + +  D R+E    K ++  +   P+ I  G K  +   +  +         V 
Sbjct: 491 ELEAAGIDVLVDDRDERPGVKFKDADLWGSPVRIAIGKKGLANGEVEWKFRNEKQFTMVK 550

Query: 634 LLDAIPILTK 643
           + D I    +
Sbjct: 551 VEDVIAKAKE 560


>gi|218960761|ref|YP_001740536.1| Prolyl-tRNA synthetase 2 (Proline--tRNA ligase 2) (ProRS 2)
           [Candidatus Cloacamonas acidaminovorans]
 gi|167729418|emb|CAO80329.1| Prolyl-tRNA synthetase 2 (Proline--tRNA ligase 2) (ProRS 2)
           [Candidatus Cloacamonas acidaminovorans]
          Length = 508

 Score =  116 bits (289), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 65/440 (14%), Positives = 146/440 (33%), Gaps = 71/440 (16%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++   T      EE+    ++++ +  D+   +E    ++     G+ I++ +   + + 
Sbjct: 3   SKNNKTAITPTREENYAEWYQQVIKAADMAENSEVRGCMVI-KPWGYAIWENIQRALDKM 61

Query: 287 IKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDL----------RTF 334
            ++  +     P  + +  ++ ++ H + +      V  +                   +
Sbjct: 62  FRETGHRNAYFPIFIPKSFFEKEAEHIEGFAKECAIVTHSKLEADGKGGLQLAGELTEPY 121

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
            ++P +     A F   + SYR+LP+ + ++ ++ R E        +R   F   + H  
Sbjct: 122 IVRPTSETIIGASFAKWVNSYRDLPLLINQWANIVRWEMR--TRLFLRTTEFLWQEGHTV 179

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDT 454
               +   E  +    ++++Y  F                                  D 
Sbjct: 180 H---ETEKEAKEETLKMLNVYAIF--------------------------------ARDY 204

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH 514
           +         T      GA      E +++D   +  Q GT        ++  A  +   
Sbjct: 205 LALPVIQGEKTESEKFPGAVTTYCIEAMMQDR--KALQSGTSHFLGQNFAK--ASEIKFQ 260

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVE---- 566
           + K          +G   R IG +I    ++    LP  ++P    +  I   A E    
Sbjct: 261 NRKGEIEYAWTTSWGVSTRLIGAIIMAHSDDNGLVLPPKIAPSHIAIIPIYRDAQEQKQV 320

Query: 567 --YAQEIANLLKSHH-----LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSI 619
             +A+ + N LK  +     L  E D R+ T + +      K IP+ +  G ++    ++
Sbjct: 321 MAFAENVQNQLKDLYLDDVPLYTELDTRDMTSSERNWYWIKKGIPLRLEIGPRDIIHDAV 380

Query: 620 GIRRFGST--TTQKVSLLDA 637
            + R        Q V + D 
Sbjct: 381 MLARRDKEPQDKQSVKISDL 400


>gi|261837685|gb|ACX97451.1| prolyl-tRNA synthetase [Helicobacter pylori 51]
          Length = 577

 Score =  116 bits (289), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 44/217 (20%), Positives = 88/217 (40%), Gaps = 11/217 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++          +++  + H+ LA+   ++ +   GSG+  +     K+   + +   +
Sbjct: 3   FSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQV---GSGIYNFLPLAKKVLDKIENATHK 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++++   + I    V+   LW++SG  D Y   +   K   D       F L P      
Sbjct: 60  RMQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKDN-----DFVLSPTLEENI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
             +  + +KSY++LPV L +  + +R+E      GL+R R F   D + F    E +  E
Sbjct: 115 TEIAANFIKSYKQLPVHLYQIHTKFRDEIRPRF-GLVRAREFIMKDGYSFHEDAESLDKE 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            L + +    I  D G +  +V+  +       S   
Sbjct: 174 FLNMQSTYKEILSDLGLDFRVVEADSGAIGGSKSKEF 210



 Score = 63.6 bits (153), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 18/164 (10%), Positives = 51/164 (31%), Gaps = 8/164 (4%)

Query: 487 IGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
             +  + G I  +         A +++ +  K     +     G       I+ +     
Sbjct: 410 YHKSLEVGHIFKLGQGYAKSLKASFLDKNG-KERFFEMGCYGIGISRLLSAILEQKSDNL 468

Query: 546 LPLWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
             +W    +P   ++        +  + A E+   L+   +    D R+     K+R+  
Sbjct: 469 GCVWTKNTAPFDVVIVVSNLKDEAQKKLAFEVYERLRQKGVDALLDDRDARFGAKMRDFE 528

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +    + +I G +    +     +  +   Q +   +    + +
Sbjct: 529 LIGERLALIVGKQTLESKEFECIKRANLEKQTLKDTELEEKILE 572


>gi|76563495|gb|ABA46079.1| prolyl-tRNA synthetase [Streptococcus agalactiae A909]
          Length = 612

 Score =  116 bits (289), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 35/190 (18%), Positives = 78/190 (41%), Gaps = 10/190 (5%)

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK 288
             +        +++   H  + R   +  ++    G+  +     +  +   + MR++ +
Sbjct: 1   MLIPTLREMPSDAQVISHALMVRAGYVRQVSA---GIYAYLPLANRTIEKFKTIMRQEFE 57

Query: 289 D-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
                E+  P +L   LW++SG +++Y  +++ +K      +D   F L P +      +
Sbjct: 58  KIGAVEMLAPALLTADLWRESGRYETYGEDLYKLKN-----RDQSDFILGPTHEETFTTL 112

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
               +KSY++LP+ L +  S YR+E     +GL+R R F   D + F    +  +   + 
Sbjct: 113 VRDAVKSYKQLPLNLYQIQSKYRDEKRPR-NGLLRTREFIMKDGYSFHKDYEDLDVTYED 171

Query: 408 HNLIISIYKD 417
           +         
Sbjct: 172 YRKAYEAIFT 181



 Score = 66.7 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/173 (19%), Positives = 63/173 (36%), Gaps = 22/173 (12%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S      +   + + +P+++     G   R +  +IE        
Sbjct: 436 RGIEIGHIFKLGTRYSDSMGANILDENGRSNPIVMGCYGIGVS-RILSAVIEQHARLFVN 494

Query: 542 ----------FKGNLPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRN 588
                     +  N P  L+P    + T+      + +  ++I   L      + TD RN
Sbjct: 495 KTPKGAYRFAWGINFPEELAPFDVHLITVNVKDQESQDLTEKIEADLMLKGYEVLTDDRN 554

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           E +  K  +  +  +PI +  G K ASE  + ++   S  T +V   + I  L
Sbjct: 555 ERVGSKFSDSDLIGLPIRVTVGKK-ASEGIVEVKIKASGDTIEVHADNLIETL 606


>gi|239631344|ref|ZP_04674375.1| prolyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|239525809|gb|EEQ64810.1| prolyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           8700:2]
          Length = 570

 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 41/205 (20%), Positives = 85/205 (41%), Gaps = 11/205 (5%)

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVL 300
           E + H+ + R   +  I     GV  +     ++   + + +  ++   D  ++  P +L
Sbjct: 14  EAKSHKMMLRSGFVRQIQA---GVYAYLPLAERVLARIEAIIDDEMTKIDAVKMKMPVLL 70

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
              LW++SG +++Y  N+F +K   D     R   L P +      +  + LKSY+ +P+
Sbjct: 71  PAELWEESGRYETYGPNLFKLKNRQD-----RKMILGPTHEETFTDLVRNELKSYKRMPL 125

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDFG 419
            L +    +R+E     +G++R R F   DA+ F + +Q  +   + + +   +I+   G
Sbjct: 126 VLYQIQDKFRDEDRPR-YGVLRGREFIMQDAYSFTSNDQDLDTIYRQMEHAYTNIFDRLG 184

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDA 444
                +           S      A
Sbjct: 185 LRYRSIIGDGGAMGGKDSKEFSAIA 209



 Score = 74.4 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 25/162 (15%), Positives = 56/162 (34%), Gaps = 11/162 (6%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G I  +         A +++ +  +  P+++     G   R +  + E       
Sbjct: 399 RGIEIGHIFKLGTRYTETMGANFLDENG-RSQPIIMGSYGIGVS-RLLSAIAEQQADEHG 456

Query: 546 --LPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              P  ++P    +  +             I  +L+    S+  D RNE    K  +  +
Sbjct: 457 LVWPTTIAPFDIHLIPVNLKREEQKSLTASIETMLEDAGYSVLVDDRNERPGVKFADSDL 516

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             +P+ +  G K   E  + ++   +  T +V   + I  + 
Sbjct: 517 IGVPLRVTVGKKAVDE-IVELKLRKTGETIEVKKEELISSIK 557


>gi|191638564|ref|YP_001987730.1| prolyl-tRNA synthetase [Lactobacillus casei BL23]
 gi|190712866|emb|CAQ66872.1| Prolyl-tRNA synthetase (Proline--tRNA ligase) (ProRS)
           [Lactobacillus casei BL23]
          Length = 579

 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 41/220 (18%), Positives = 89/220 (40%), Gaps = 11/220 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +         +E + H+ + R   +  I     GV  +     ++   + + +  +
Sbjct: 8   SRMFIPTEKEVPSSAEAKSHKMMLRSGFVRQIQA---GVYAYLPLAERVLARIEAIIDDE 64

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +   D  ++  P +L   LW++SG +++Y  N+F +K   D     R   L P +     
Sbjct: 65  MTKIDAVKMKMPVLLPAELWEESGRYETYGPNLFKLKNRQD-----RKMILGPTHEETFT 119

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +  + LKSY+ +P+ L +    +R+E     +G++R R F   DA+ F + +Q  +   
Sbjct: 120 DLVRNELKSYKRMPLVLYQIQDKFRDEDRPR-YGVLRGREFIMQDAYSFTSNDQDLDTIY 178

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
           + + +   +I+   G     +           S      A
Sbjct: 179 RQMEHAYTNIFDRLGLRYRSIIGDGGAMGGKDSKEFSAIA 218



 Score = 72.1 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 25/162 (15%), Positives = 56/162 (34%), Gaps = 11/162 (6%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G I  +         A +++ +  +  P+++     G   R +  + E       
Sbjct: 408 RGIEIGHIFKLGTRYTETMGANFLDENG-RSQPIIMGSYGIGVS-RLLSAIAEQQADEHG 465

Query: 546 --LPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              P  ++P    +  +             I  +L+    S+  D RNE    K  +  +
Sbjct: 466 LVWPTTIAPFDIHLIPVNLKREEQKSLTASIETMLEVAGYSVLVDDRNERPGVKFADSDL 525

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             +P+ +  G K   E  + ++   +  T +V   + I  + 
Sbjct: 526 IGVPLRVTVGKKAVDE-IVELKLRKTGETIEVKKEELISSIK 566


>gi|207108695|ref|ZP_03242857.1| prolyl-tRNA synthetase [Helicobacter pylori HPKX_438_CA4C1]
          Length = 254

 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 49/275 (17%), Positives = 99/275 (36%), Gaps = 27/275 (9%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++          +++  + H+ LA+   ++ +   GSG+  +     K+   + +   +
Sbjct: 3   FSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQV---GSGIYNFLPLAKKVLDKIENITHK 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++++   + I    V+   LW++SG  D Y   +   K   D       F L P      
Sbjct: 60  RMQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKDN-----DFVLSPTLEENI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
             +  + +KSY++LPV L +  + +R+E      GL+R R F   D + F    E +  E
Sbjct: 115 TEIAANFIKSYKQLPVHLYQIHTKFRDEIRPRF-GLVRAREFIMKDGYSFHEDAESLDKE 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            L   +    I  D G +  +V+  +       S             VL      +    
Sbjct: 174 FLNTQSAYKEILSDLGLDFRIVEADSGAIGGSKSKEF---------VVLTECGEDT---- 220

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
              +++ +   Y    E   +            Q+
Sbjct: 221 ---IVVCQNCDYAANIEIAKRSKRPEPLNVPKAQL 252


>gi|229552422|ref|ZP_04441147.1| proline--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
 gi|258539792|ref|YP_003174291.1| prolyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705]
 gi|229314159|gb|EEN80132.1| proline--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
 gi|257151468|emb|CAR90440.1| Prolyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705]
          Length = 576

 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 41/220 (18%), Positives = 89/220 (40%), Gaps = 11/220 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +         +E + H+ + R   +  +     GV  +     ++   + + +  +
Sbjct: 4   SRMFIPTEKEVPSSAEAKSHKMMLRSGFVRQVQA---GVYAYLPLAERVLSRIEAIIDDE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +   D  ++  P +L   LW++SG +++Y  N+F +K   D     R   L P +     
Sbjct: 61  MTKIDAVKMKMPALLPAELWEESGRYETYGPNLFKLKNRQD-----RKMILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +  + LKSY+ +P+ L +    +R+E     +G++R R F   DA+ F + +Q  N   
Sbjct: 116 DLVRNELKSYKRMPLVLYQIQDKFRDEDRPR-YGVLRGREFIMQDAYSFTSNDQDLNTIY 174

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
           + + +   +I+   G     +           S      A
Sbjct: 175 RQMEHAYTNIFDRLGLRYRTIIGDGGAMGGKDSKEFSAIA 214



 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 25/161 (15%), Positives = 55/161 (34%), Gaps = 9/161 (5%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  + G I  +         A +++ +  +  P+++     G       I  +    +  
Sbjct: 404 RGIEIGHIFKLGTRYSETMGADFLDENG-RSQPIIMGSYGIGVSRLLSAIAEQQADDHGL 462

Query: 548 LWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W    +P    +  +             I  +L+    S+  D RNE    K  +  + 
Sbjct: 463 IWPTTIAPFDIHLIPVNLKREEQKTLTAAIGTMLEDAGYSVLVDDRNERPGVKFADSDLI 522

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            IP+ +  G K   E  + ++   +  T +V   + I  + 
Sbjct: 523 GIPLRVTVGKKAVDE-IVELKLRKTGETIEVKKEELISSIK 562


>gi|50290081|ref|XP_447472.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49526782|emb|CAG60409.1| unnamed protein product [Candida glabrata]
          Length = 552

 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 43/188 (22%), Positives = 80/188 (42%), Gaps = 11/188 (5%)

Query: 253 MDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDY--EEINTPQVLDQHLWQQSGH 310
            +L  I    SG+  W   G +    L + +R+++ +D    E++   +  +  W+++G 
Sbjct: 36  QNLGFIRRTQSGLFNWLPLGLRTLHKLEALVRKRMDEDASAIEVSLSSLSPKINWEKTGR 95

Query: 311 WDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYR 370
           WD     +F VK       +   + L P       ++  + +KSY++LP+   +    YR
Sbjct: 96  WDK-SNELFKVKD-----NNAFEYCLTPTCEEDITSLMKNYIKSYKDLPITAYQISRKYR 149

Query: 371 NEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR 430
           +E      GL+R R F   DA+ F + E+   E     + +    + F   KI  K +  
Sbjct: 150 DEKRPR-GGLLRGREFIMKDAYSFASSEEQAIEIFNKMDSVYD--RIFSDLKIPYKAAYA 206

Query: 431 PEKRVGSD 438
               +G D
Sbjct: 207 DSGEIGGD 214



 Score = 49.4 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/235 (15%), Positives = 75/235 (31%), Gaps = 12/235 (5%)

Query: 384 RGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDD 443
           R F  + A      +         ++ I+ +Y+    + +  K+    + R+ S + + D
Sbjct: 281 RQFNWNLAQSVMENDLDMALKDVGNDKILEMYQSENEDYMFSKILRVMDVRINSRSNFPD 340

Query: 444 AENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLP 503
                  +   +KN+        ++         K E     A           +     
Sbjct: 341 F-----PLSKYLKNNFGQIDGISIVDATDKEICGKCEDGTLHASNSIEVGHIFHLGDKYS 395

Query: 504 SRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE----NFKGNLPLWLSPIQAIVTT 559
             F   + + ++     V +     G I R IG   E    +     P  ++P Q  V T
Sbjct: 396 KPFEVNFKDENNSDDSIVSMGCYGIG-ISRLIGAAAEIGRDHMGLRWPQVIAPYQVSVVT 454

Query: 560 ITSSAVEYAQEIANLLKSHHLSIETDF--RNETINYKIREHSIKKIPIIIICGDK 612
             +  +    ++   L  +  + + D   R+     +I       IPI +I G K
Sbjct: 455 SNNEGMVAINDMKKSLMKNLDTFDLDDLHRSTGFGGRIALSHAIGIPICVIIGTK 509


>gi|164658475|ref|XP_001730363.1| hypothetical protein MGL_2745 [Malassezia globosa CBS 7966]
 gi|159104258|gb|EDP43149.1| hypothetical protein MGL_2745 [Malassezia globosa CBS 7966]
          Length = 509

 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 66/453 (14%), Positives = 148/453 (32%), Gaps = 94/453 (20%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
           +I +  SG   +   G ++ + L + +  ++      ++  PQ+L   LW ++G +++  
Sbjct: 55  YIRQSASGTYTYLPIGLRMLKKLTAIIEDEMHQISASQLELPQLLSPALWHKTGRFEAMG 114

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
           + +F +K      +      L P +      +    + S + LPVR+ + G  +R+EP  
Sbjct: 115 SELFRLKD-----RRGNDMILAPTHEEEITKLVGMEIDSAKSLPVRVFQIGRKFRDEPRP 169

Query: 376 SLHGLMRVRGFTQDDAHVFC--------TKEQMFNECLKIHNLIISIYKDFGFEKIMVK- 426
              GL+R + F   D + F         T E +     +I   +    +    E   ++ 
Sbjct: 170 R-AGLLRTKEFLMKDMYSFDVSVEDARITYEDVLCAYERIFQRVFCWDQARSSETTWMRA 228

Query: 427 ------------LSTRPEKRVGSDAL-----------WDDAENIMKGVLDTIKNSSQDRI 463
                                G D L            + A+++ +G     +     R 
Sbjct: 229 TADSGTMGGKLSHEFHVPDPAGEDTLLSCDQCSYTSNVECAKSLGRGTKQEEQGHQHGRD 288

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA------FYVNSHSEK 517
            T                       R+ +   +   F L +R++          ++  ++
Sbjct: 289 ETVTNAARAGDRCASC----THGTLREHKAIEVGHTFLLGTRYSEALGYHVVPRHADPKR 344

Query: 518 CHPVMIHRAVFGS-IERFIGIMIENFKGNLPLW--------------------------- 549
              V +    +G  I R +G + +        W                           
Sbjct: 345 PERVPLQMGCYGIGITRVLGALAQRAAREFDAWHAATAQTSSMPLQRRRPQRVGFFWPCE 404

Query: 550 LSPIQAIVTTITSSAVE----------------YAQEIANLLKSHHLSIETDFRN-ETIN 592
           ++P +A+V   T   ++                +A  +  LL   +  +  D R  +++ 
Sbjct: 405 IAPFRALVLPSTPQHMDIAMRLCTQLDGGLAVTWADGMQELLHVPNEDVALDDRTHQSLG 464

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
            ++ +  +   PI++I G        + +R+ G
Sbjct: 465 SRLFDSDLMGYPIVLILGKHYDQTGEVEVRQAG 497


>gi|317013684|gb|ADU81120.1| prolyl-tRNA synthetase [Helicobacter pylori Gambia94/24]
          Length = 577

 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 44/217 (20%), Positives = 88/217 (40%), Gaps = 11/217 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++          +++  + H+ LA+   ++ +   GSG+  +     K+   + +   +
Sbjct: 3   FSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQV---GSGIYNFLPLAKKVLDKIENVTHK 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++++   + I    V+   LW++SG  D Y   +   K   D       F L P      
Sbjct: 60  RMQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKDN-----DFVLSPTLEENI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
             +  + +KSY++LPV L +  + +R+E      GL+R R F   D + F    E +  E
Sbjct: 115 TEIAANFIKSYKQLPVHLYQIHTKFRDEIRPRF-GLVRAREFIMKDGYSFHEDTESLGEE 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            L + +    I  D G +  +V+  +       S   
Sbjct: 174 FLNMQSAYKEILSDLGLDFRIVEADSGAIGGSKSREF 210



 Score = 62.9 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 18/164 (10%), Positives = 51/164 (31%), Gaps = 8/164 (4%)

Query: 487 IGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
             +  + G I  +         A +++ +  K     +     G       I+ +     
Sbjct: 410 YHKSLEVGHIFKLGQGYAKSLKASFLDKNG-KEQFFEMGCYGIGISRLLSAILEQKSDDL 468

Query: 546 LPLWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
             +W    +P   ++        +  + A E+   L    + +  D R+     K+R+  
Sbjct: 469 GCVWTKNTAPFDVVIVVSNLKDEAQKKLAFEVYERLLQKGVDVLLDDRDARFGAKMRDFE 528

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +    + +I G +    +     +  +   Q +   +    + +
Sbjct: 529 LIGERLALIVGKQTLESKEFECIKRANLEKQTIKDTELEEKILE 572


>gi|330833575|ref|YP_004402400.1| prolyl-tRNA synthetase [Streptococcus suis ST3]
 gi|329307798|gb|AEB82214.1| prolyl-tRNA synthetase [Streptococcus suis ST3]
          Length = 615

 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 33/184 (17%), Positives = 75/184 (40%), Gaps = 10/184 (5%)

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEE 293
                ++    H  + R   +  I+    G+  +     ++ +   + MR +    D  E
Sbjct: 7   REMPSDASVISHALMLRAGYVRQISA---GIYSYLPLANRVIEKAKNIMREEFDKIDAIE 63

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
              P +L   +W++SG +++Y  +++ +K      ++   F L P +      +    ++
Sbjct: 64  FLAPALLSADIWRESGRYETYGDDLYKLKN-----REGSDFILGPTHEETVTLLARDAVQ 118

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SY++LP+ + +  S YR+E     +GL+R R F   D + F    +  ++    +     
Sbjct: 119 SYKQLPLNIYQIQSKYRDEKRPR-NGLLRGREFIMKDGYSFHASYESLDQTYDDYKAAYE 177

Query: 414 IYKD 417
               
Sbjct: 178 AIFT 181



 Score = 72.9 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/179 (20%), Positives = 69/179 (38%), Gaps = 23/179 (12%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S      +   + +  P+++     G       ++ ++       
Sbjct: 437 RGIEIGHIFKLGTRYSDSMNANILDENGRSMPIIMGCYGIGVSRLLSAVLEQHARLFVNK 496

Query: 542 ---------FKGNLPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNE 589
                    +  N P  L+P    +  +     +A+E  Q I   L      + TD RNE
Sbjct: 497 TPKGEYRYAWGINFPKELAPFDVHLIPVNVKDEAAMELTQSIEASLVGAGYEVLTDDRNE 556

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV---SLLDAIPILTKES 645
            +  K  +  +  +PI +  G K A++  + ++  G+  T +V    LL+ + ILTKE+
Sbjct: 557 RVGVKFSDSDLIGLPIRVTVGKK-AADGIVEVKIKGTGDTVEVHVDQLLETLQILTKEN 614


>gi|213024165|ref|ZP_03338612.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. 404ty]
          Length = 194

 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 39/184 (21%), Positives = 75/184 (40%), Gaps = 8/184 (4%)

Query: 284 RRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
           R ++ +    E++ P V    LWQ+SG W+ Y   +       +     R F L P +  
Sbjct: 1   REEMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGE-----RPFVLGPTHEE 55

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN 402
               +  + L SY++LP+   +  + +R+E      G+MR R F   DA+ F T ++   
Sbjct: 56  VITDLVRNELSSYKQLPLNFFQIQTKFRDEVRPRF-GVMRSREFLMKDAYSFHTSQESLQ 114

Query: 403 ECLK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
           E    ++     I+   G +   V+  T       S      A++    ++  +   ++ 
Sbjct: 115 ETYDAMYAAYSRIFSRMGLDFRAVQADTGSIGGNASHEFQVLAQSGEDDIVFLMFLITRL 174

Query: 462 RINT 465
            +N 
Sbjct: 175 TLNW 178


>gi|308182413|ref|YP_003926540.1| prolyl-tRNA synthetase [Helicobacter pylori PeCan4]
 gi|308064598|gb|ADO06490.1| prolyl-tRNA synthetase [Helicobacter pylori PeCan4]
          Length = 577

 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 49/275 (17%), Positives = 99/275 (36%), Gaps = 27/275 (9%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++          +++  + H+ LA+   ++ +   GSG+  +     K+   + +   +
Sbjct: 3   FSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQV---GSGIYNFLPLAKKVLDKIENITHK 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++++   + I    V+   LW++SG  D Y   +   K   D       F L P      
Sbjct: 60  RMQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKDN-----DFVLSPTLEENI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
             +  + +KSY++LPV L +  + +R+E      GL+R R F   D + F    E +  E
Sbjct: 115 TEIAANFIKSYKQLPVHLYQIHTKFRDEIRPRF-GLVRAREFIMKDGYSFHEDAESLDKE 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            L   +    I  D G +  +V+  +       S             VL      +    
Sbjct: 174 FLNTQSAYKEILSDLGLDFRIVEADSGAIGGSKSREF---------VVLTECGEDT---- 220

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
              +++ +   Y    E   +            Q+
Sbjct: 221 ---IVVCQNCDYAANIEIAKRSKRPDPLNVPKAQL 252



 Score = 64.4 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 18/164 (10%), Positives = 52/164 (31%), Gaps = 8/164 (4%)

Query: 487 IGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
             +  + G I  +         A +++ +  K     +     G       I+ +     
Sbjct: 410 YHKSLEVGHIFKLGQGYAKSLKASFLDKNG-KERFFEMGCYGIGISRLLSAILEQKSDDL 468

Query: 546 LPLWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
             +W    +P   ++        +  + A E+   L+   +    D R+     K+R+  
Sbjct: 469 GCVWTKNTAPFDVVIVVSNWKDEAQKKLAFEVYERLRQKGVDALLDDRDARFGAKMRDFE 528

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +    + +I G +    +     +  +   Q +  ++    + +
Sbjct: 529 LIGERLALIVGKQTLESKEFECIKRANLEKQTIKDIELEEKILE 572


>gi|208434185|ref|YP_002265851.1| prolyl-tRNA synthetase [Helicobacter pylori G27]
 gi|226701296|sp|B5ZA05|SYP_HELPG RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|208432114|gb|ACI26985.1| prolyl-tRNA synthetase [Helicobacter pylori G27]
          Length = 577

 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 49/275 (17%), Positives = 99/275 (36%), Gaps = 27/275 (9%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++          +++  + H+ LA+   ++ +   GSG+  +     K+   + +   +
Sbjct: 3   FSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQV---GSGIYNFLPLAKKVLDKIENITHK 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++++   + I    V+   LW++SG  D Y   +   K   D       F L P      
Sbjct: 60  RMQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKDN-----DFVLSPTLEENI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
             +  + +KSY++LPV L +  + +R+E      GL+R R F   D + F    E +  E
Sbjct: 115 TEIAANFIKSYKQLPVHLYQIHTKFRDEIRPRF-GLVRAREFIMKDGYSFHEDAESLDKE 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            L   +    I  D G +  +V+  +       S             VL      +    
Sbjct: 174 FLNTQSAYKEILSDLGLDFRIVEADSGAIGGSKSREF---------VVLTECGEDT---- 220

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
              +++ +   Y    E   +            Q+
Sbjct: 221 ---IVVCQNCDYAANIEIAKRSKRPEPLNVPKAQL 252



 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 21/176 (11%), Positives = 55/176 (31%), Gaps = 10/176 (5%)

Query: 475 YGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           + P  +  LK    +  + G I  +         A +++ +  K     +     G    
Sbjct: 400 HCPNCQGALK--YHKSLEVGHIFKLGQGYAKSLKASFLDKNG-KEQFFEMGCYGIGISRL 456

Query: 534 FIGIMIENFKGNLPLWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFR 587
              I+ +       +W    +P   ++        +  + A E+   L    +    D R
Sbjct: 457 LSAILEQKSDDLGCVWTKNTAPFDVVIVVSNWKDEAQKKLAFEVYERLLQKGVDALLDDR 516

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +     K+R+  +    + +I G +    +     +  +   Q +   +    + +
Sbjct: 517 DARFGAKMRDFELIGERLALIVGKQALESKEFECIKRANLEKQTLKDTELEEKILE 572


>gi|15644866|ref|NP_207036.1| prolyl-tRNA synthetase [Helicobacter pylori 26695]
 gi|2501038|sp|P56124|SYP_HELPY RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|2313329|gb|AAD07305.1| prolyl-tRNA synthetase (proS) [Helicobacter pylori 26695]
          Length = 577

 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 49/275 (17%), Positives = 99/275 (36%), Gaps = 27/275 (9%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++          +++  + H+ LA+   ++ +   GSG+  +     K+   + +   +
Sbjct: 3   FSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQV---GSGIYNFLPLAKKVLDKIENITHK 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++++   + I    V+   LW++SG  D Y   +   K   D       F L P      
Sbjct: 60  RMQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKDN-----DFVLSPTLEENI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
             +  + +KSY++LPV L +  + +R+E      GL+R R F   D + F    E +  E
Sbjct: 115 TEIAANFIKSYKQLPVHLYQIHTKFRDEIRPRF-GLVRAREFIMKDGYSFHEDAESLDKE 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            L   +    I  D G +  +V+  +       S             VL      +    
Sbjct: 174 FLNTQSAYKEILSDLGLDFRIVEADSGAIGGSKSREF---------VVLTECGEDT---- 220

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
              +++ +   Y    E   +            Q+
Sbjct: 221 ---IVVCQNCDYAANIEIAKRSKRPEPLNVPKAQL 252



 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 18/164 (10%), Positives = 51/164 (31%), Gaps = 8/164 (4%)

Query: 487 IGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
             +  + G I  +         A +++ +  K     +     G       I+ +     
Sbjct: 410 YHKSLEVGHIFKLGQGYAKSLKASFLDKNG-KEQFFEMGCYGIGISRLLSAILEQKSDDL 468

Query: 546 LPLWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
             +W    +P   ++        +  + A E+   L    +    D R+     K+R+  
Sbjct: 469 GCVWTKNTAPFDVVIVVSNWKDEAQKKLAFEVYERLLQKGVDALLDDRDARFGAKMRDFE 528

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +    + +I G +    +     +  +   Q +  ++    + +
Sbjct: 529 LIGERLALIIGKQTLESKEFECIKRANLEKQTIKDIELEEKILE 572


>gi|153853331|ref|ZP_01994740.1| hypothetical protein DORLON_00727 [Dorea longicatena DSM 13814]
 gi|149754117|gb|EDM64048.1| hypothetical protein DORLON_00727 [Dorea longicatena DSM 13814]
          Length = 209

 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 39/195 (20%), Positives = 80/195 (41%), Gaps = 5/195 (2%)

Query: 15  KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVI 73
           + F    T  D+A+          V V ++G++ +L   ++ +  +E +T  D       
Sbjct: 15  RKFREGTTYLDIAKEYQHEYEHDIVLVFVDGRLQELFKTLKKDCKLEFVTTADSLGYKAY 74

Query: 74  RHSCAHIMAEAVQSIWPEVQ---VAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEII 130
           R S + ++ +AV  +        V I   +  G+Y   +     + + L ++E++M+ ++
Sbjct: 75  RRSMSLMLVKAVYDVAEHKNIDKVRIHYSVSKGYYCTIEGNIELTQEFLDKVERRMRTMV 134

Query: 131 ARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRS 190
            ++ P  K+ +  + A  +F       K E L        V +Y   E+ D   G  V S
Sbjct: 135 EKNLPIQKKSVHTDDAIAMFGEHGMHDK-ERLFHYRRVSRVNIYSMNEFEDYYYGYMVPS 193

Query: 191 TGQVKKFFKLMKVAG 205
            G +K    +  + G
Sbjct: 194 AGYLKYSNYICMMKG 208


>gi|210134438|ref|YP_002300877.1| prolyl-tRNA synthetase [Helicobacter pylori P12]
 gi|226701295|sp|B6JKG9|SYP_HELP2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|210132406|gb|ACJ07397.1| prolyl-tRNA synthetase [Helicobacter pylori P12]
          Length = 577

 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 49/275 (17%), Positives = 99/275 (36%), Gaps = 27/275 (9%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++          +++  + H+ LA+   ++ +   GSG+  +     K+   + +   +
Sbjct: 3   FSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQV---GSGIYNFLPLAKKVLDKIENITHK 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++++   + I    V+   LW++SG  D Y   +   K   D       F L P      
Sbjct: 60  RMQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKDN-----DFVLSPTLEENI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
             +  + +KSY++LPV L +  + +R+E      GL+R R F   D + F    E +  E
Sbjct: 115 TEIAANFIKSYKQLPVHLYQIHTKFRDEIRPRF-GLVRAREFIMKDGYSFHEDAESLDKE 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            L   +    I  D G +  +V+  +       S             VL      +    
Sbjct: 174 FLNTQSAYKEILSDLGLDFRIVEADSGAIGGSKSREF---------VVLTECGEDT---- 220

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
              +++ +   Y    E   +            Q+
Sbjct: 221 ---IVVCQNCDYAANIEIAKRSKRPEPLNVPKAQL 252



 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 18/164 (10%), Positives = 51/164 (31%), Gaps = 8/164 (4%)

Query: 487 IGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
             +  + G I  +         A +++ +  K     +     G       I+ +     
Sbjct: 410 YHKSLEVGHIFKLGQGYAKSLKASFLDKNG-KEQFFEMGCYGIGISRLLSAILEQKSDDL 468

Query: 546 LPLWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
             +W    +P   ++        +  + A E+   L    +    D R+     K+R+  
Sbjct: 469 GCVWTKNTAPFDVVIVVSNLKDEAQKKLAFEVYERLLQKGVDALLDDRDARFGAKMRDFE 528

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +    + +I G +    +     +  +   Q +  ++    + +
Sbjct: 529 LIGERLALIVGKQTLESKEFECIKRANLEKQTIKDIELEEKILE 572


>gi|269303377|gb|ACZ33477.1| prolyl-tRNA synthetase [Chlamydophila pneumoniae LPCoLN]
          Length = 568

 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 40/217 (18%), Positives = 90/217 (41%), Gaps = 9/217 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q          + +    +  L +   LF +++   GV  +    W++   +++ +R 
Sbjct: 3   TSQLFYKTSKNANKSAAVLSNELLEKAGYLFKVSK---GVYTYTPLLWRVVSKMMNIIRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +E+  P + +  LWQ +G W+++ +        D   ++ ++  L P +    
Sbjct: 60  ELNAIGGQELLLPLLHNAELWQHTGRWEAFTSEGLLYTLKD---REGKSHCLAPTHEEVI 116

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNE 403
            +     L S R+LP+ L +  + +R+E      GL+R R    +D++ F  + EQM  +
Sbjct: 117 CSFVAQWLSSKRQLPLHLYQIATKFRDEIRPRF-GLIRSRELLMEDSYTFSDSPEQMNEQ 175

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
             K+ +    I+   G    +V        +  S+  
Sbjct: 176 YEKLRSGYSKIFDRLGLAYAIVTADGGKIGKGKSEEF 212



 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 33/157 (21%), Positives = 59/157 (37%), Gaps = 9/157 (5%)

Query: 489 RDWQCGTIQVDFNLPSRF-NAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN- 545
           R +Q   +   FNL +R+ ++F VN   E           +G  + R +   +E    + 
Sbjct: 404 RIYQGIEVAHIFNLGTRYTDSFEVNFQDEHGQTQQCWMGTYGIGVGRTLAACVEQLADDR 463

Query: 546 ---LPLWLSPIQAIVTTITSS--AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
               P  L+P    +        + E A+ + + L+S       D R+E + +K+++  +
Sbjct: 464 GIVWPKALAPFSITIAFNGGDTVSQELAETLYHELQSQGYEPLLDDRDERLGFKLKDSDL 523

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
             IP  +I G    S     I    S     VS    
Sbjct: 524 IGIPYKLILGKSYQSSGIFEIESR-SGEKYTVSPEAF 559


>gi|218282600|ref|ZP_03488838.1| hypothetical protein EUBIFOR_01424 [Eubacterium biforme DSM 3989]
 gi|218216471|gb|EEC90009.1| hypothetical protein EUBIFOR_01424 [Eubacterium biforme DSM 3989]
          Length = 564

 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 53/278 (19%), Positives = 113/278 (40%), Gaps = 33/278 (11%)

Query: 228 QQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI 287
           +   + +    E ++  D       +    I +  +G+      G K+   + + +R ++
Sbjct: 2   KLSQSFFYTLRENAKDEDSVSSNLLVRAGMIKKCSNGIYMIMPMGKKVLSKVENIIREEM 61

Query: 288 KD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA 346
              D +E+  P ++ + ++ QSG  +++ +NMF++    +     + + L P +      
Sbjct: 62  DAKDAQELLMPALIPEDVYVQSGRREAFGSNMFSLSDRYN-----KRYVLGPTHEELFAV 116

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL- 405
             +   KSY++ P  L +  + YR+E     +GL+RVR F   DA+ F   E   +    
Sbjct: 117 ASSMDGKSYKDFPYNLYQIQTKYRDETRPR-YGLIRVREFIMKDAYTFDVDEAGLDVAYN 175

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN-----------------IM 448
           K+++    I    G E  +VK  T     + S+     +                    +
Sbjct: 176 KMYDAYCRIMDRLGLEYKIVKADTGAMGGLLSEEYQALSSIGEDVVVGCVGCDYSSNLEI 235

Query: 449 KGVLDTIKNSSQDRI--------NTGVLLGEGAFYGPK 478
             V+DT+++S+++ +        N   +    AF+G K
Sbjct: 236 TEVVDTMQDSTEEELSMEVVDTPNAKTIEEVAAFFGKK 273



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 57/153 (37%), Gaps = 10/153 (6%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG----NLPLWLSPI 553
           +        N +Y +++++     M    +   +ER +  + +          P+ ++P 
Sbjct: 411 LGTKYSKSMNLYYTDANNQLQPVWMGSYGI--GLERCMAAVADQHHDDFGIKWPVEIAPF 468

Query: 554 QAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           +  +  ++      V+ A ++    K H   +  D RNE    K ++  +  IP  I  G
Sbjct: 469 RLAIVPVSLKDEEQVKIANDLYEYCKEHKFDVILDDRNERPGVKFKDMELIGIPYRITVG 528

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +   E  +      +    ++++ D    + K
Sbjct: 529 -RGVKEGKLEWTDRYTGEKSEIAIEDVYSEIEK 560


>gi|307636931|gb|ADN79381.1| prolyl tRNA synthetase [Helicobacter pylori 908]
 gi|325995521|gb|ADZ50926.1| Prolyl-tRNA synthetase [Helicobacter pylori 2018]
 gi|325997119|gb|ADZ49327.1| Prolyl-tRNA synthetase [Helicobacter pylori 2017]
          Length = 577

 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 45/217 (20%), Positives = 87/217 (40%), Gaps = 11/217 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++          +++  + H+ LA+   ++ +   GSG+  +     K+   + +   +
Sbjct: 3   FSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQV---GSGIYNFLPLAKKVLDKIENITHK 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++++   + I    V+   LW++SG  D Y   +   K   D       F L P      
Sbjct: 60  RMQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKDN-----DFVLSPTLEENI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
             +  + +KSY++LPV L +  + +R+E      GL+R R F   D + F    E +  E
Sbjct: 115 TEIAANFIKSYKQLPVHLYQIHTKFRDEIRPRF-GLVRAREFIMKDGYSFHEDTESLDKE 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            L   N    I  D G +  +V+  +       S   
Sbjct: 174 FLNTQNAYKEILSDLGLDFRIVEADSGAIGGSKSREF 210



 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 18/164 (10%), Positives = 52/164 (31%), Gaps = 8/164 (4%)

Query: 487 IGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
             +  + G I  +         A +++ +  K     +     G       I+ +     
Sbjct: 410 YHKSLEVGHIFKLGQGYAKSLKASFLDKNG-KERFFEMGCYGIGISRLLSAILEQKSDDL 468

Query: 546 LPLWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
             +W    +P   ++        +  + A E+   L    + +  D R+     K+R+  
Sbjct: 469 GCVWTKNTAPFDVVIVVSNLKDEAQKKLAFEVYERLLQKGVDVLLDDRDARFGAKMRDFE 528

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +    + +I G +    +     +  +   Q +  ++    + +
Sbjct: 529 LIGERLALIIGKQTLESKEFECIKRANLEKQTIKDIELEEKILE 572


>gi|126695873|ref|YP_001090759.1| prolyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
 gi|166980139|sp|A3PBN3|SYP_PROM0 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|126542916|gb|ABO17158.1| Prolyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
          Length = 600

 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 45/231 (19%), Positives = 92/231 (39%), Gaps = 8/231 (3%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
            E+E   H+ L +   +  +    SG+  +     ++ + + + + +++      ++  P
Sbjct: 17  SEAEIISHQLLLKAGYIRRV---NSGIYAYMPLMLRVVEKISAIIEKELNSIGCTKLLLP 73

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           Q+    LW++S  W+ Y A    +    D  +  + F L P +     ++ +  + SY++
Sbjct: 74  QLHPADLWKKSERWEGYTAGEGIMFNLKD--RQGKEFGLAPTHEEVITSIASETINSYKQ 131

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYK 416
           LP    +  + +R+E      GLMR R F   D + F + E        K+ N   +I++
Sbjct: 132 LPQCFYQIQTKFRDEIRPRF-GLMRSREFIMKDGYSFHSSENDLASFYEKVGNAYENIFE 190

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGV 467
             G + + V   +       S      A+     +L T   S    I   V
Sbjct: 191 SCGLQTVGVDADSGAIGGASSKEFMVTADAGEDSILFTQSGSYAANIEKAV 241



 Score = 79.1 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/193 (16%), Positives = 70/193 (36%), Gaps = 15/193 (7%)

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIG--RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHP 520
           N  +     A  G K      + +   +  + G I Q+      + NA + +   +  + 
Sbjct: 404 NYLIGDIRNAKKGDKISIDDDEELKEKKGIEIGHIFQLGQKYSEKLNAKFSDKDGQLKN- 462

Query: 521 VMIHRAVFGS-IERFIGIMIENFKGN----LPLWLSPIQAIVTTITSS---AVEYAQEIA 572
             +    +G  + R     IE          P+ +SP + I+           +  ++I 
Sbjct: 463 --LWMGCYGIGVTRIAQAAIEQNHDQKGICWPIQISPFEVIIIPTNLKDPIQSDLTEQIY 520

Query: 573 NLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
           N    + + +  D RN+    K ++  +  IP  +I G +++  + + +    + T  K+
Sbjct: 521 NNFLINKIDVLLDDRNDRAGVKFKDAELIGIPFQVIIG-RDSINKEVELFCRTNNTKIKI 579

Query: 633 SLLDAIPILTKES 645
           S    +     ES
Sbjct: 580 STDKLLETFISES 592


>gi|108562666|ref|YP_626982.1| prolyl-tRNA synthetase [Helicobacter pylori HPAG1]
 gi|123373844|sp|Q1CUR4|SYP_HELPH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|107836439|gb|ABF84308.1| prolyl-tRNA synthetase [Helicobacter pylori HPAG1]
          Length = 577

 Score =  115 bits (287), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 44/217 (20%), Positives = 87/217 (40%), Gaps = 11/217 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++          +++  + H+ LA+   ++ +   GSG+  +     K+   + +   +
Sbjct: 3   FSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQV---GSGIYNFLPLAKKVLDKIENITHK 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++++   + I    V+   LW++SG  D Y   +   K   D       F L P      
Sbjct: 60  RMQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKDN-----DFVLSPTLEENI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
             +  + +KSY++LPV L +  + +R+E      GL+R R F   D + F    E +  E
Sbjct: 115 TEIAANFIKSYKQLPVHLYQIHTKFRDEIRPRF-GLVRAREFIMKDGYSFHEDAESLDKE 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            L   +    I  D G +  +V+  +       S   
Sbjct: 174 FLNTQSAYKEILNDLGLDFRIVEADSGAIGGSKSKEF 210



 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/241 (12%), Positives = 79/241 (32%), Gaps = 11/241 (4%)

Query: 410 LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL 469
           LI      +G +K +  +    + + G   +    E     V   +K   ++ +   ++ 
Sbjct: 336 LIAGFIGPYGLKKHVPYIIFDEDLKEGDCLITGANEKDFHAVGVDLK-GFENLVYADIVQ 394

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
            + + + P  +  LK    +  + G I  +         A +++ +  K     +     
Sbjct: 395 VKESDHCPNCQGALK--YHKSLEVGHIFKLGQGYAKSLRASFLDKNG-KEQFFEMGCYGI 451

Query: 529 GSIERFIGIMIENFKGNLPLWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSI 582
           G       I+ +       +W    +P   ++        +  + A E+   L    +  
Sbjct: 452 GISRLLSAILEQKSDDLGCVWTKNTAPFDVVIVVSNWKDEAQKKLAFEVYERLLQKGVDA 511

Query: 583 ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             D R+     K+R+  +    + +I G +    +     +  +   Q +  ++    + 
Sbjct: 512 LLDDRDARFGAKMRDFELIGERLALIIGKQTLENKEFECIKRANLEKQTIKDIELEEKIL 571

Query: 643 K 643
           +
Sbjct: 572 E 572


>gi|297379463|gb|ADI34350.1| prolyl-tRNA synthetase [Helicobacter pylori v225d]
          Length = 577

 Score =  115 bits (287), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 44/217 (20%), Positives = 87/217 (40%), Gaps = 11/217 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++          +++  + H+ LA+   ++ +   GSG+  +     K+   + +   +
Sbjct: 3   FSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQV---GSGIYNFLPLAKKVLDKIENITHK 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++++   + I    V+   LW++SG  D Y   +   K   D       F L P      
Sbjct: 60  RMQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKDN-----DFVLSPTLEENI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
             +  + +KSY++LPV L +  + +R+E      GL+R R F   D + F    E +  E
Sbjct: 115 TEIAANFIKSYKQLPVHLYQIHTKFRDEIRPRF-GLVRAREFIMKDGYSFHEDAESLDKE 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            L   +    I  D G +  +V+  +       S   
Sbjct: 174 FLNTQSAYKEILSDLGLDFRIVEADSGAIGGSKSREF 210



 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/176 (11%), Positives = 56/176 (31%), Gaps = 10/176 (5%)

Query: 475 YGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           + P  +  LK    +  + G I  +         A +++ +  K     +     G    
Sbjct: 400 HCPNCQGALK--YHKSLEVGHIFKLGQGYAKSLKASFLDKNG-KERFFEMGCYGIGISRL 456

Query: 534 FIGIMIENFKGNLPLWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFR 587
              I+ +       +W    +P   ++        +  + A E+   L+   +    D R
Sbjct: 457 LSTILEQKSDDLGCVWTKNTAPFDVVIVVSNWKDEAQKKLAFEVYERLRQKGVDALLDDR 516

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +     K+R+  +    + +I G +    +     +  +   Q +   +    + +
Sbjct: 517 DARFGAKMRDFELIGERLALIVGKQTLESKEFECIKRANLEKQTLKDTELEEKILE 572


>gi|199597103|ref|ZP_03210535.1| prolyl-tRNA synthetase [Lactobacillus rhamnosus HN001]
 gi|258508613|ref|YP_003171364.1| prolyl-tRNA synthetase [Lactobacillus rhamnosus GG]
 gi|199591907|gb|EDY99981.1| prolyl-tRNA synthetase [Lactobacillus rhamnosus HN001]
 gi|257148540|emb|CAR87513.1| Prolyl-tRNA synthetase [Lactobacillus rhamnosus GG]
 gi|259649920|dbj|BAI42082.1| prolyl-tRNA synthetase [Lactobacillus rhamnosus GG]
          Length = 576

 Score =  115 bits (287), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 40/220 (18%), Positives = 89/220 (40%), Gaps = 11/220 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +         +E + H+ + R   +  +     GV  +     ++   + + +  +
Sbjct: 4   SRMFIPTEKEVPSSAEAKSHKMMLRSGFVRQVQA---GVYAYLPLAERVLSRIEAIIDDE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +   D  ++  P +L   LW++SG +++Y  N+F +K   D     R   L P +     
Sbjct: 61  MTKIDAVKMKMPALLPAELWEESGRYETYGPNLFKLKNRQD-----RKMILGPTHEETFT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +  + LKSY+ +P+ L +    +R+E     +G++R R F   DA+ F + +Q  +   
Sbjct: 116 DLVRNELKSYKRMPLVLYQIQDKFRDEDRPR-YGVLRGREFIMQDAYSFTSNDQDLDTIY 174

Query: 406 K-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
           + + +   +I+   G     +           S      A
Sbjct: 175 RQMEHAYTNIFDRLGLRYRTIIGDGGAMGGKDSKEFSAIA 214



 Score = 72.9 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/162 (16%), Positives = 57/162 (35%), Gaps = 11/162 (6%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE----NFK 543
           R  + G I  +         A +++ +  +  P+++     G   R +  + E    +  
Sbjct: 404 RGIEIGHIFKLGTRYSETMGADFLDENG-RSQPIIMGSYGIGVS-RLLSAIAEQQADDHG 461

Query: 544 GNLPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              P  ++P    +  +             I  +L+    S+  D RNE    K  +  +
Sbjct: 462 LIWPTTIAPFDIHLIPVNLKREEQKTLTASIGTMLEDAGYSVLVDDRNERPGVKFADSDL 521

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             IP+ +  G K   E  + ++   +  T +V   + I  + 
Sbjct: 522 IGIPLRVTVGKKAVDE-IVELKLRKTGETIEVKKEELISSIK 562


>gi|308063100|gb|ADO04987.1| prolyl-tRNA synthetase [Helicobacter pylori Sat464]
          Length = 577

 Score =  115 bits (287), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 44/217 (20%), Positives = 88/217 (40%), Gaps = 11/217 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++          +++  + H+ LA+   ++ +   GSG+  +     K+   + +   +
Sbjct: 3   FSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQV---GSGIYNFLPLAKKVLDKIENITHK 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++++   + I    V+   LW++SG  D Y   +   K   D       F L P      
Sbjct: 60  RMQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKDN-----DFVLSPTLEENI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
             + ++ +KSY++LPV L +  + +R+E      GL+R R F   D + F    E +  E
Sbjct: 115 TEIASNFIKSYKQLPVHLYQIHTKFRDEIRPRF-GLVRAREFIMKDGYSFHEDAESLDKE 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            L   +    I  D G +  +V+  +       S   
Sbjct: 174 FLNTQSAYKEILSDLGLDFRIVEADSGAIGGSKSREF 210



 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 20/175 (11%), Positives = 53/175 (30%), Gaps = 8/175 (4%)

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           + P  +  LK    +  + G I       ++         + K     +     G     
Sbjct: 400 HCPNCQGALK--YHKSLEVGHIFKLGQGYAKSLKASFLDKNAKERFFEMGCYGIGISRLL 457

Query: 535 IGIMIENFKGNLPLWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRN 588
             I+ +       +W    +P   ++        +  + A E+   L    +    D R+
Sbjct: 458 SAILEQKSDDLGCVWTKNTAPFDVVIVVSNWKDGAQKKLAFEVYERLLQKGVDALLDDRD 517

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
                K+R+  +    + +I G +    +     +  +   Q +  ++    + +
Sbjct: 518 ARFGAKMRDFELIGERLALIVGKQTLESKEFECIKRANLEKQTLKDIELEEKILE 572


>gi|256075323|ref|XP_002573969.1| prolyl-tRNA synthetase [Schistosoma mansoni]
 gi|238659161|emb|CAZ30202.1| prolyl-tRNA synthetase, putative [Schistosoma mansoni]
          Length = 472

 Score =  115 bits (287), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 73/399 (18%), Positives = 141/399 (35%), Gaps = 48/399 (12%)

Query: 247 RKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLW 305
           +KL R   L  I  D +GV  +  +  +  + L S +   +     + +  P +  +H+W
Sbjct: 28  QKLLRLYGL--IFSDSTGVYAFGPEVLRSLRKLESLVDNSMLQLGAQRVLLPTLGPRHIW 85

Query: 306 QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEF 365
           ++SG W + ++++F VK      +    + L+P +             SY+ LPV + + 
Sbjct: 86  EKSGRWSTMQSSLFRVKD-----RLSHEYCLQPTHEEYITNFVACLNLSYKSLPVLVYQI 140

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIM 424
            S +R+EP    HGL+R R F   D + F    E       ++      +  +     ++
Sbjct: 141 TSKFRDEPHPK-HGLVRGREFLMQDIYTFDASVETAEKTYKRVKTAYSDLMVNLELPYLV 199

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN-TGVLLGEGAFY-----GPK 478
                     + S+    +A+     +L   K S +      G+   EG +       P 
Sbjct: 200 ACADPGNVGGLISEEFHVEADIGEDRILTCSKCSLKFNSELEGIYHYEGNYLQVKLPAPS 259

Query: 479 FEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG-SIERFIG 536
             Y L       ++      +       F+A Y +    K    ++    +G  I R + 
Sbjct: 260 VPYNLAQKYSMKFKVAHCFLLGERYSKCFDATYRSPSGSK----LMFMGCYGLGISRLLA 315

Query: 537 IMIEN--------------FKGNLPLWLSPIQAIVTTITSSAVEYA--QEIANLLK---- 576
           + IE+               +   P+ ++P    +      A +     E+  +L     
Sbjct: 316 VCIEHLTRVAFPDKSKDQITQLRWPVRIAPYSGAIVLQKEMAKDSVNPDELKYILDTIQS 375

Query: 577 -----SHHLSIETDFR-NETINYKIREHSIKKIPIIIIC 609
                     I  D R   ++  KI + S   IP I+  
Sbjct: 376 DSINFKLPGDILVDDRMGLSLGRKILDQSRLGIPWILTV 414


>gi|298736816|ref|YP_003729346.1| prolyl-tRNA synthetase [Helicobacter pylori B8]
 gi|298356010|emb|CBI66882.1| prolyl-tRNA synthetase [Helicobacter pylori B8]
          Length = 577

 Score =  115 bits (287), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 50/300 (16%), Positives = 104/300 (34%), Gaps = 27/300 (9%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++          +++  + H+ LA+   ++ +   GSG+  +     K+   + +   +
Sbjct: 3   FSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQV---GSGIYNFLPLAKKVLDKIENITHK 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++++   + I    V+   LW++SG  D Y   +   K   +       F L P      
Sbjct: 60  RMQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKNN-----DFVLSPTLEENI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
             +  + +KSY++LPV L +  + +R+E      GL+R R F   D + F    E +  E
Sbjct: 115 TEIAANFIKSYKQLPVHLYQIHTKFRDEIRPRF-GLVRAREFIMKDGYSFHEDAESLDKE 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
            L   +    I  D G +  +V+  +       S             VL      +    
Sbjct: 174 FLNTQSAYKEILSDLGLDFRIVEADSGAIGGSKSKEF---------VVLTECGEDT---- 220

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
              +++ +   Y    E   +            Q+         +    +   K  P  +
Sbjct: 221 ---IVVCKNCDYAANIEIAKRSKRPEPSNVPKAQLAKFPTPNTTSTQSVAEFFKTEPYFV 277



 Score = 64.4 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 21/176 (11%), Positives = 56/176 (31%), Gaps = 10/176 (5%)

Query: 475 YGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           + P  +  LK    +  + G I  +         A +++ +  K     +     G    
Sbjct: 400 HCPNCQGALK--YHKSLEVGHIFKLGQGYAKSLKASFLDKNG-KEQFFEMGCYGIGISRL 456

Query: 534 FIGIMIENFKGNLPLWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFR 587
              I+ +       +W    +P   ++        +  + A E+   L    +    D R
Sbjct: 457 LSAILEQKSDDLGCVWTKNTAPFDVVIVVSNWKDEAQKKLAFEVYERLLQKGVDALLDDR 516

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +     K+R+  +    + +I G +    +     +  +   Q +  ++    + +
Sbjct: 517 DARFGAKMRDFELIGERLALIVGKQTLENKEFECVKRANLEKQTIKDIELEEKILE 572


>gi|281411980|ref|YP_003346059.1| phosphoribulokinase/uridine kinase [Thermotoga naphthophila RKU-10]
 gi|281373083|gb|ADA66645.1| phosphoribulokinase/uridine kinase [Thermotoga naphthophila RKU-10]
          Length = 555

 Score =  115 bits (287), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 49/224 (21%), Positives = 89/224 (39%), Gaps = 9/224 (4%)

Query: 6   KLTFP---DGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDL-SDPVREGSIEI 61
           K+T     DG    F  +    D+A    +    K +A  +N ++ +L   P R G +E 
Sbjct: 3   KITLRSKLDGREIVFEENQNLFDIAREYQKYYRYKILAARVNNRIIELFRTPDRSGELEF 62

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ---PFSSDE 118
           +   DP  L + +     + + AV+ +  E ++ +   +  G Y +  K         ++
Sbjct: 63  LDLTDPDGLRIYQRGLVFLASLAVRKLNSEWRLKVLHSLGKGIYCEIYKGNELIVPDQNQ 122

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           +  I+ KM+E++ +D P  K+    ++ARE+   +    K   L     K  V LY    
Sbjct: 123 VFAIKDKMRELVEKDLPIEKRTFYKDEAREILMKEG-LVKTVNLFKYRKKRTVKLYHCDG 181

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYW-RGDSNRPMLSRIY 221
           ++    G    STG++  F       G      D     L  I+
Sbjct: 182 FWAYFYGYLPPSTGRIDVFDVQPYNQGLVLVHPDPKTRELPVIH 225


>gi|315586236|gb|ADU40617.1| proline--tRNA ligase [Helicobacter pylori 35A]
          Length = 577

 Score =  115 bits (287), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 44/217 (20%), Positives = 87/217 (40%), Gaps = 11/217 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++          +++  + H+ LA+   ++ +   GSG+  +     K+   + +   +
Sbjct: 3   FSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQV---GSGIYNFLPLAKKVLDKIENITHK 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++++   + I    V+   LW++SG  D Y   +   K   D       F L P      
Sbjct: 60  RMQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKDN-----DFVLSPTLEENI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
             +  + +KSY++LPV L +  + +R+E      GL+R R F   D + F    E +  E
Sbjct: 115 TEIAANFIKSYKQLPVHLYQIHTKFRDEIRPRF-GLVRAREFIMKDGYSFHEDAESLDKE 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            L   +    I  D G +  +V+  +       S   
Sbjct: 174 FLNTQSAYKEILSDLGLDFRIVEADSGAIGGSKSREF 210



 Score = 63.6 bits (153), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 21/176 (11%), Positives = 56/176 (31%), Gaps = 10/176 (5%)

Query: 475 YGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           + P  +  LK    +  + G I  +         A +++ +  K     +     G    
Sbjct: 400 HCPNCQGALK--YHKSLEVGHIFKLGQGYAKSLKASFLDKNG-KERFFEMGCYGIGISRL 456

Query: 534 FIGIMIENFKGNLPLWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFR 587
              I+ +       +W    +P   ++        +  + A E+   L+   +    D R
Sbjct: 457 LSAILEQKSDDLGCVWTKNTAPFDVVIVVSNWKDEAQKKLAFEVYERLRQKGVDALLDDR 516

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +     K+R+  +    + +I G +    +     +  +   Q +   +    + +
Sbjct: 517 DARFGAKMRDFELIGERLALIIGKQTLESKEFECIKRANLEKQTLKDTELEEKILE 572


>gi|312374940|gb|EFR22399.1| hypothetical protein AND_15306 [Anopheles darlingi]
          Length = 467

 Score =  115 bits (287), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 67/375 (17%), Positives = 126/375 (33%), Gaps = 45/375 (12%)

Query: 269 HRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
                +  Q  I  + R ++  D + I  P +    LW+QSG  +        ++  D  
Sbjct: 53  LPVLQRAVQKAIDLIDRHMQSVDAQRITLPVLTPAELWRQSGRLNESDPPTELLQTKD-- 110

Query: 328 IKDLRTFALKPMNCPGHV-AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
            +  +   L P +       +      SYR+ P+RL +  + +R+E      GLMR + F
Sbjct: 111 -RHGKMQILGPTHEESITALMAAIAPVSYRQFPLRLYQISTKFRDEMKPRF-GLMRAKEF 168

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLII------------SIYKDFGFEKIMVKLSTRPEKR 434
              D + F        +  +  N                +  D G     +         
Sbjct: 169 LMKDLYTFDVDPHRCRQTYETVNAAYGRLFSEIGVPFVKVAGDSGTMGGSLSHEYHFPSE 228

Query: 435 VGSDALWDDAENIMKGVLDTIKN--SSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
           VG D L    +  ++   + ++   +  DR   G            FE        R  +
Sbjct: 229 VGEDELLQCDQCGVRTNSEHLQKICALCDRCGAGKESTAS---TSSFERQ------RGIE 279

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE----NFKGNLPL 548
            G   +  +  ++         + K  P+ +     G   R I   +E      +   PL
Sbjct: 280 VGHAFILEDRYTKPLGASCLQPNGKPTPLQMGCYGIGVT-RLIAASLEVLSSEKELRWPL 338

Query: 549 WLSPIQAIVTTITSSAVE------YAQEIANLLKSH--HL--SIETDFRNE-TINYKIRE 597
            L+P +  + T  + + E      +   + NLL +        +  D RN+ TI  ++ +
Sbjct: 339 ALAPYRVCIVTPKAGSKEESLVSPWVDRLYNLLHTAVPGCQGDVIVDDRNQLTIGKRVLD 398

Query: 598 HSIKKIPIIIICGDK 612
                 P+I++ G K
Sbjct: 399 ARRMGYPLIVVIGAK 413


>gi|317180044|dbj|BAJ57830.1| prolyl-tRNA synthetase [Helicobacter pylori F32]
          Length = 577

 Score =  115 bits (287), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 44/217 (20%), Positives = 87/217 (40%), Gaps = 11/217 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++          +++  + H+ LA+   ++ +   GSG+  +     K+   + +   +
Sbjct: 3   FSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQV---GSGIYNFLPLAKKVLDKIENITHK 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++++   + I    V+   LW++SG  D Y   +   K   D       F L P      
Sbjct: 60  RMQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKDN-----DFVLSPTLEENI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
             +  + +KSY++LPV L +  + +R+E      GL+R R F   D + F    E +  E
Sbjct: 115 TEIAANFIKSYKQLPVHLYQIHTKFRDEIRPRF-GLVRAREFIMKDGYSFHEDAESLDKE 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            L   +    I  D G +  +V+  +       S   
Sbjct: 174 FLNTQSAYKEILSDLGLDFRIVEADSGAIGGSKSREF 210



 Score = 64.0 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 21/176 (11%), Positives = 56/176 (31%), Gaps = 10/176 (5%)

Query: 475 YGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           + P  +  LK    +  + G I  +         A +++ +  K     +     G    
Sbjct: 400 HCPNCQGALK--YHKSLEVGHIFKLGQGYAKSLKASFLDKNG-KERFFEMGCYGIGISRL 456

Query: 534 FIGIMIENFKGNLPLWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFR 587
              I+ +       +W    +P   ++        +  + A E+   L+   +    D R
Sbjct: 457 LSAILEQKSDDLGCVWTKNTAPFDVVIVVSNWKDEAQKKLAFEVYERLRQKGVDALLDDR 516

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +     K+R+  +    + +I G +    +     +  +   Q +   +    + +
Sbjct: 517 DARFGAKMRDFELIGERLALIVGKQTLESKEFECIKRANLEKQTLKDTELEEKILE 572


>gi|213023484|ref|ZP_03337931.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 149

 Score =  115 bits (287), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 73/148 (49%), Positives = 100/148 (67%), Gaps = 3/148 (2%)

Query: 157 YKVEIL-ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRP 215
           YKV IL E+I   +   LY   E+ D+CRGPHV +      F KLMK AGAYWRGDSN  
Sbjct: 1   YKVSILDENIAHDDKPGLYHHEEYVDMCRGPHVPNMRFCHHF-KLMKTAGAYWRGDSNNK 59

Query: 216 MLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKI 275
           ML RIYGTAW  ++ L  YL  LEE+ KRDHRK+ +++DL+H+ E+  G++FWH  GW I
Sbjct: 60  MLQRIYGTAWADKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTI 119

Query: 276 FQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           F+ L  ++R K+K+  Y+E+  P ++D+
Sbjct: 120 FRELEVFVRSKLKEYQYQEVKGPFMMDR 147


>gi|15643514|ref|NP_228560.1| uridine kinase-related protein [Thermotoga maritima MSB8]
 gi|148269323|ref|YP_001243783.1| phosphoribulokinase/uridine kinase [Thermotoga petrophila RKU-1]
 gi|4981276|gb|AAD35832.1|AE001744_22 uridine kinase-related protein [Thermotoga maritima MSB8]
 gi|147734867|gb|ABQ46207.1| phosphoribulokinase/uridine kinase [Thermotoga petrophila RKU-1]
          Length = 555

 Score =  115 bits (287), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 49/224 (21%), Positives = 89/224 (39%), Gaps = 9/224 (4%)

Query: 6   KLTFP---DGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDL-SDPVREGSIEI 61
           K+T     DG    F  +    D+A    +    K +A  +N ++ +L   P R G +E 
Sbjct: 3   KITLRSKLDGREIVFEENQNLFDIAREYQKYYRYKILAARVNNRIIELFRTPDRSGELEF 62

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ---PFSSDE 118
           +   DP  L + +     + + AV+ +  E ++ +   +  G Y +  K         ++
Sbjct: 63  LDLTDPDGLRIYQRGLVFLASLAVRKLNSEWRLKVLHSLGKGIYCEIYKGNELIVPDQNQ 122

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           +  I+ KM+E++ +D P  K+    ++ARE+   +    K   L     K  V LY    
Sbjct: 123 VFAIKDKMRELVEKDLPIEKRTFYKDEAREILMKEG-LVKTVNLFKYRKKRTVKLYHCDG 181

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYW-RGDSNRPMLSRIY 221
           ++    G    STG++  F       G      D     L  I+
Sbjct: 182 FWAYFYGYLPPSTGRIDVFDVQPYNQGLVLVHPDPKTRELPVIH 225


>gi|317008889|gb|ADU79469.1| prolyl-tRNA synthetase [Helicobacter pylori India7]
          Length = 577

 Score =  115 bits (287), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 45/217 (20%), Positives = 87/217 (40%), Gaps = 11/217 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++          +++  + H+ LA+   ++ +   GSG+  +     K+   + +   +
Sbjct: 3   FSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQV---GSGIYNFLPLAKKVLDKIENITHK 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++++   + I    V+   LW++SG  D Y   +   K   D       F L P      
Sbjct: 60  RMQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKDN-----DFVLSPTLEENI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
             +  + +KSY++LPV L +  + +R+E      GL+R R F   D + F    E +  E
Sbjct: 115 TEIAANFIKSYKQLPVHLYQIHTKFRDEIRPRF-GLVRAREFIMKDGYSFHEDAESLDEE 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            L   N    I  D G +  +V+  +       S   
Sbjct: 174 FLNTQNAYKEILSDLGLDFRIVEADSGAIGGSKSREF 210



 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/164 (11%), Positives = 51/164 (31%), Gaps = 8/164 (4%)

Query: 487 IGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
             +  + G I  +         A +++ +  K     +     G       I+ +     
Sbjct: 410 YHKSLEVGHIFKLGQGYAKSLKASFLDKNG-KERFFEMGCYGIGISRLLSTILEQKSDDL 468

Query: 546 LPLWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
             +W    +P   ++        +  + A E+   L    +    D R+     K+R+  
Sbjct: 469 GCVWTKNTAPFDVVIVVSNWKDEAQKKLAFEVYERLLQKGVDALLDDRDARFGAKMRDFE 528

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +    + +I G +    R     +  +   Q +  ++    + +
Sbjct: 529 LIGERLALIIGKQTLESREFECIKRANLEKQTLKDIELEEKILE 572


>gi|188527045|ref|YP_001909732.1| prolyl-tRNA synthetase [Helicobacter pylori Shi470]
 gi|226701297|sp|B2US70|SYP_HELPS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|188143285|gb|ACD47702.1| prolyl-tRNA synthetase [Helicobacter pylori Shi470]
          Length = 577

 Score =  115 bits (287), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 44/217 (20%), Positives = 87/217 (40%), Gaps = 11/217 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++          +++  + H+ LA+   ++ +   GSG+  +     K+   + +   +
Sbjct: 3   FSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQV---GSGIYNFLPLAKKVLDKIENITHK 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++++   + I    V+   LW++SG  D Y   +   K   D       F L P      
Sbjct: 60  RMQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKDN-----DFVLSPTLEENI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
             +  + +KSY++LPV L +  + +R+E      GL+R R F   D + F    E +  E
Sbjct: 115 TEIAANFIKSYKQLPVHLYQIHTKFRDEIRPRF-GLVRAREFIMKDGYSFHEDAESLDKE 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            L   +    I  D G +  +V+  +       S   
Sbjct: 174 FLNTQSAYKEILSDLGLDFRIVEADSGAIGGSKSREF 210



 Score = 64.4 bits (155), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 18/171 (10%), Positives = 53/171 (30%), Gaps = 8/171 (4%)

Query: 480 EYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           +   +    +  + G I  +         A +++ +  K     +     G       I+
Sbjct: 403 DCQGELKYHKSLEVGHIFKLGQGYAKSLKASFLDKNG-KERFFEMGCYGIGISRLLSAIL 461

Query: 539 IENFKGNLPLWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
            +       +W    +P   ++        +  + A E+   L+   +    D R+    
Sbjct: 462 EQKSDDLGCVWTKNTAPFDVVIVVSNWKDEAQKKLAFEVYERLRQKGVDALLDDRDARFG 521

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            K+R+  +    + +I G +    +     +  +   Q +   +    + +
Sbjct: 522 AKMRDFELIGERLALIVGKQTLESKEFECIKRANLEKQTLKDTELEEKILE 572


>gi|218258477|ref|ZP_03474844.1| hypothetical protein PRABACTJOHN_00499 [Parabacteroides johnsonii
           DSM 18315]
 gi|218225449|gb|EEC98099.1| hypothetical protein PRABACTJOHN_00499 [Parabacteroides johnsonii
           DSM 18315]
          Length = 555

 Score =  114 bits (286), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 42/220 (19%), Positives = 81/220 (36%), Gaps = 3/220 (1%)

Query: 1   MPSDIKLTFPDGSI-KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGS 58
           M   I +   + +  K  P+ ++  D+   +   L  + +   +N K   L+        
Sbjct: 1   MSETITIYCKNNNTYKEVPIGSSLLDIYSLVGAPLRLRPMNAQVNNKTEGLTFRCWHPKD 60

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           +E +       +     S  HI ++AV  + P   + +   I  G+Y      +    + 
Sbjct: 61  VEYVDYSGLSGMRTYVRSLCHIFSKAVNDVLPSATLNLEHPISKGYYCVIHNGKDIDEET 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           + +I+K+M+EII  D PF  + +    A  LF  +    K  ++ES       + Y    
Sbjct: 121 IGKIKKRMREIIDADLPFHLKTVRTVDAAVLFRERGMNDKARLIES-AGMPYTSYYELDG 179

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLS 218
           + +   G    STG ++ F  +    G   R         
Sbjct: 180 YINYFYGCLTPSTGYIQHFDLVPYFDGVLLRVPQRTNPTE 219


>gi|312277616|gb|ADQ62273.1| Prolyl-tRNA synthetase [Streptococcus thermophilus ND03]
          Length = 615

 Score =  114 bits (286), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 36/190 (18%), Positives = 79/190 (41%), Gaps = 10/190 (5%)

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK 288
             +        +++   H  + R   +  ++    G+  +     +  +   + MR + +
Sbjct: 1   MLIPTLREMPSDAQVISHALMVRAGYVRQVSA---GIYAYMPLANRAIEKFKTIMREEFE 57

Query: 289 D-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
                E+  P +L   LW++SG +++Y  +++ +K  D++      F L P +      +
Sbjct: 58  KIGAVEMLAPALLTADLWRESGRYETYGEDLYKLKNRDNS-----DFILGPTHEETFTVL 112

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
               +KSY++LP+ L +  S YR+E     +GL+R R F   DA+ F    +  +   + 
Sbjct: 113 VRDAVKSYKQLPLNLYQIQSKYRDEKRPR-NGLLRTREFIMKDAYSFHQNYEDLDVTYED 171

Query: 408 HNLIISIYKD 417
           +         
Sbjct: 172 YRKAYEAIFT 181



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/175 (19%), Positives = 64/175 (36%), Gaps = 24/175 (13%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S      V   + +  P+++     G   R +  +IE        
Sbjct: 436 RGIEIGHIFKLGTRYSESMGANVLDENGRAVPIIMGCYGIGVS-RILSAVIEQHARLFVN 494

Query: 542 ----------FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSH----HLSIETDFR 587
                     +  N P  L+P    + T+ +   E A  + + L++        +  D R
Sbjct: 495 KTPKGQYRYAWGINFPKELAPYDVHLITVNTKDEE-ANALTDRLEAALAAEGYDVLIDDR 553

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           NE +  K  +  +  +PI +  G K ASE  + ++   +  T +V+  + I  L 
Sbjct: 554 NERVGSKFSDSDLIGLPIRVTVGKK-ASEGVVEVKIKATGDTIEVNADNLIETLA 607


>gi|254778944|ref|YP_003057049.1| prolyl-tRNA synthetase [Helicobacter pylori B38]
 gi|254000855|emb|CAX28787.1| Prolyl-tRNA synthetase (Proline--tRNA ligase) (ProRS) (Global RNA
           synthesis factor) [Helicobacter pylori B38]
          Length = 577

 Score =  114 bits (286), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 44/217 (20%), Positives = 87/217 (40%), Gaps = 11/217 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++          +++  + H+ LA+   ++ +   GSG+  +     K+   + +   +
Sbjct: 3   FSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQV---GSGIYNFLPLAKKVLDKIENITHK 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++++   + I    V+   LW++SG  D Y   +   K   D       F L P      
Sbjct: 60  RMQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKDN-----DFVLSPTLEENI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
             +  + +KSY++LPV L +  + +R+E      GL+R R F   D + F    E +  E
Sbjct: 115 TEIAANFIKSYKQLPVHLYQIHTKFRDEIRPRF-GLVRAREFIMKDGYSFHEDAESLDKE 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            L   +    I  D G +  +V+  +       S   
Sbjct: 174 FLNTQSAYKEILSDLGLDFRIVEADSGAIGGSKSREF 210



 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 21/166 (12%), Positives = 58/166 (34%), Gaps = 12/166 (7%)

Query: 487 IGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
             +  + G I  +         A +++ + ++          +G  I R +G ++E    
Sbjct: 410 YHKSLEVGHIFKLGQGYAKSLKASFLDKNGKEQ---FFEMGCYGIGISRLLGAILEQKSD 466

Query: 545 NL-PLWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +L  +W    +P   ++        +  + A E+   L    +    D R+     K+R+
Sbjct: 467 DLGCVWTKNTAPFDVVIVVSNWKDEAQKKLAFEVYERLLQKGVDALLDDRDARFGAKMRD 526

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             +    + +I G +    +     +  +   Q +  ++    + +
Sbjct: 527 FELIGERLALIIGKQTLESKEFECIKRANLEKQTIKDIELEEKILE 572


>gi|116100417|gb|ABJ65563.1| Prolyl-tRNA synthetase [Streptococcus thermophilus LMD-9]
          Length = 615

 Score =  114 bits (286), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 36/190 (18%), Positives = 79/190 (41%), Gaps = 10/190 (5%)

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK 288
             +        +++   H  + R   +  ++    G+  +     +  +   + MR + +
Sbjct: 1   MLIPTLREMPSDAQVISHALMVRAGYVRQVSA---GIYAYMPLANRAIEKFKTIMREEFE 57

Query: 289 D-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
                E+  P +L   LW++SG +++Y  +++ +K  D++      F L P +      +
Sbjct: 58  KIGAVEMLAPALLTADLWRESGRYETYGEDLYKLKNRDNS-----DFILGPTHEETFTVL 112

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
               +KSY++LP+ L +  S YR+E     +GL+R R F   DA+ F    +  +   + 
Sbjct: 113 VRDAVKSYKQLPLNLYQIQSKYRDEKRPR-NGLLRTREFIMKDAYSFHQNYEDLDVTYED 171

Query: 408 HNLIISIYKD 417
           +         
Sbjct: 172 YRKAYEAIFT 181



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/175 (19%), Positives = 64/175 (36%), Gaps = 24/175 (13%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S      V   + +  P+++     G   R +  +IE        
Sbjct: 436 RGIEIGHIFKLGTRYSESMGANVLDENGRAVPIIMGCYGIGVS-RILSAVIEQHARLFVN 494

Query: 542 ----------FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSH----HLSIETDFR 587
                     +  N P  L+P    + T+ +   E A  + + L++        +  D R
Sbjct: 495 KTPKGQYRYAWGINFPKELAPYDVHLITVNTKDEE-ANALTDRLEAALAAEGYDVLIDDR 553

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           NE +  K  +  +  +PI +  G K ASE  + ++   +  T +V+  + I  L 
Sbjct: 554 NERVGSKFSDSDLIGLPIRVTVGKK-ASEGVVEVKIKATGDTIEVNADNLIETLA 607


>gi|308061592|gb|ADO03480.1| prolyl-tRNA synthetase [Helicobacter pylori Cuz20]
          Length = 577

 Score =  114 bits (286), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 44/217 (20%), Positives = 87/217 (40%), Gaps = 11/217 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++          +++  + H+ LA+   ++ +   GSG+  +     K+   + +   +
Sbjct: 3   FSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQV---GSGIYNFLPLAKKVLDKIENITHK 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++++   + I    V+   LW++SG  D Y   +   K   D       F L P      
Sbjct: 60  RMQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKDN-----DFVLSPTLEENI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
             +  + +KSY++LPV L +  + +R+E      GL+R R F   D + F    E +  E
Sbjct: 115 TEIAANFIKSYKQLPVHLYQIHTKFRDEIRPRF-GLVRAREFIMKDGYSFHEDAESLDKE 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            L   +    I  D G +  +V+  +       S   
Sbjct: 174 FLNTQSAYKEILSDLGLDFRIVEADSGAIGGSKSREF 210



 Score = 63.6 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 17/171 (9%), Positives = 53/171 (30%), Gaps = 8/171 (4%)

Query: 480 EYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           +   +    +  + G I  +         A +++ +  K     +     G       I+
Sbjct: 403 DCQGELKYHKSLEVGHIFKLGQGYAKSLKASFLDKNG-KERFFEMGCYGIGISRLLSAIL 461

Query: 539 IENFKGNLPLWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
            +       +W    +P   ++        +  + A E+   L+   +    D R+    
Sbjct: 462 EQKSDDLGCVWTKNTAPFDVVIVVSNWKDEAQKKLAFEVYERLRQKGVDALLDDRDARFG 521

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            K+R+  +    + +I G +    +     +  +   + +   +    + +
Sbjct: 522 AKMRDFELIGERLALIVGKQTLESKEFECIKRANLEKRTLKDTELEEKILE 572


>gi|123968100|ref|YP_001008958.1| prolyl-tRNA synthetase [Prochlorococcus marinus str. AS9601]
 gi|152112943|sp|A2BPZ0|SYP_PROMS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|123198210|gb|ABM69851.1| Prolyl-tRNA synthetase [Prochlorococcus marinus str. AS9601]
          Length = 600

 Score =  114 bits (286), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 51/259 (19%), Positives = 100/259 (38%), Gaps = 15/259 (5%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
            E+E   H+ L +   +  +    SG+  +     ++ + + + + +++      ++  P
Sbjct: 17  SEAEIISHQLLLKAGYIRRV---NSGIYAYMPLMLRVIEKISAIIEKELNSIGCTKLLLP 73

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           Q+    LW++S  W+ Y A    +    D  +  + F L P +     ++ +  + SY++
Sbjct: 74  QLHPADLWKKSERWEGYTAGEGIMFNLKD--RQGKEFGLAPTHEEVITSIASETINSYKQ 131

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYK 416
           LP    +  + +R+E      GLMR R F   D + F + +        K+ N   +I+K
Sbjct: 132 LPQCFYQIQTKFRDEIRPRF-GLMRSREFIMKDGYSFHSSQNDLASFYEKVSNAYENIFK 190

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
             G + + V+  +       S      A+     +L T   S    I   V L       
Sbjct: 191 SCGLQTVGVEADSGAIGGASSKEFMVTADAGEDSILFTQSGSYAANIEKAVSL------- 243

Query: 477 PKFEYILKDAIGRDWQCGT 495
           P     LKD I    +   
Sbjct: 244 PSQPIPLKDNIPEWLETPH 262



 Score = 77.9 bits (190), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 67/181 (37%), Gaps = 15/181 (8%)

Query: 476 GPKFEYILKDAIG--RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-I 531
           G K      + +   +  + G I Q+      + NA + +   +  +   +    +G  +
Sbjct: 416 GDKISVYDDEELKEKKGIEIGHIFQLGQKYSEKLNAKFSDKDGQLKN---LWMGCYGIGV 472

Query: 532 ERFIGIMIENFKGN----LPLWLSPIQAIVTTITSS---AVEYAQEIANLLKSHHLSIET 584
            R     IE          P+ +SP + I+           +  ++I +    + + +  
Sbjct: 473 TRIAQAAIEQNHDQKGICWPIHISPFEVIIIPTNLKDPIQSDLTEQIYSNFLINKIDVLL 532

Query: 585 DFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           D RN+    K ++  +  IP  II G +++  + + +    + T  K+S    +     E
Sbjct: 533 DDRNDRAGVKFKDAELIGIPFQIIIG-RDSINKEVELLCRTNNTKLKISTDKLLETFISE 591

Query: 645 S 645
           S
Sbjct: 592 S 592


>gi|332673080|gb|AEE69897.1| proline--tRNA ligase [Helicobacter pylori 83]
          Length = 577

 Score =  114 bits (286), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 44/217 (20%), Positives = 87/217 (40%), Gaps = 11/217 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++          +++  + H+ LA+   ++ +   GSG+  +     K+   + +   +
Sbjct: 3   FSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQV---GSGIYNFLPLAKKVLDKIENITHK 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++++   + I    V+   LW++SG  D Y   +   K   D       F L P      
Sbjct: 60  RMQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKDN-----DFVLSPTLEENI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
             +  + +KSY++LPV L +  + +R+E      GL+R R F   D + F    E +  E
Sbjct: 115 TEIAANFIKSYKQLPVHLYQIHTKFRDEIRPRF-GLVRAREFIMKDGYSFHEDAESLDKE 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            L   +    I  D G +  +V+  +       S   
Sbjct: 174 FLNTQSAYKEILSDLGLDFRVVEADSGAIGGSKSREF 210



 Score = 60.6 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 18/164 (10%), Positives = 50/164 (30%), Gaps = 8/164 (4%)

Query: 487 IGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
             +  + G I  +         A +++ +  K     +     G       I+ +     
Sbjct: 410 YHKSLEVGHIFKLGQGYAKSLKASFLDKNG-KERFFEMGCYGIGISRLLSAILEQKSDDL 468

Query: 546 LPLWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
             +W    +P   ++        +  + A E+   L+   +    D R      K+R+  
Sbjct: 469 GCVWTKNTAPFDVVIVVSNWKDEAQKKLAFEVYERLRQKGVDALLDDREAHFGAKMRDFE 528

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +    + +I G +    +     +  +   Q +   +    + +
Sbjct: 529 LIGERLALIVGKQTLESKEFECIKRANLEKQTLKDTELEEKILE 572


>gi|153816190|ref|ZP_01968858.1| hypothetical protein RUMTOR_02438 [Ruminococcus torques ATCC 27756]
 gi|317500510|ref|ZP_07958733.1| phosphoribulokinase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|331089391|ref|ZP_08338290.1| hypothetical protein HMPREF1025_01873 [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|145846525|gb|EDK23443.1| hypothetical protein RUMTOR_02438 [Ruminococcus torques ATCC 27756]
 gi|316898099|gb|EFV20147.1| phosphoribulokinase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|330404759|gb|EGG84297.1| hypothetical protein HMPREF1025_01873 [Lachnospiraceae bacterium
           3_1_46FAA]
          Length = 556

 Score =  114 bits (286), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 46/201 (22%), Positives = 77/201 (38%), Gaps = 8/201 (3%)

Query: 12  GSIKNFPVHATGSDVAESISRSLAKKAVAVAINGK--VCDLSDPVR-EGSIEIITPEDPR 68
              K F    T   VA+    S +  AV   + G+  + +L   V  +  ++ IT  D  
Sbjct: 12  NETKEFEEGTTYQAVAKEFCGSFSHPAVLA-VEGENRLQELRKTVEKDCELKFITTADAI 70

Query: 69  SLAVIRHSCAHIMAEAVQSIWPEV---QVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
                + S   ++ +AV  +       +V I   ++ G+Y   D +   +   LA + K+
Sbjct: 71  GHETYKRSLCFLLVKAVHDVAGHDKIERVRIHFSVDKGYYCTVDGDIKITEQFLADVAKR 130

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+ +     P  K+ +  + A ELF       K E L        V +Y   E+ D   G
Sbjct: 131 MRWLSDEKIPIKKKTIHTDDAIELFHRHGMYDK-EKLFEYRRVSKVNIYSINEFEDYYYG 189

Query: 186 PHVRSTGQVKKFFKLMKVAGA 206
             V  TG +K F   +   G 
Sbjct: 190 YMVPDTGYLKYFSLHLYDEGF 210


>gi|317179366|dbj|BAJ57154.1| prolyl-tRNA synthetase [Helicobacter pylori F30]
          Length = 577

 Score =  114 bits (286), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 45/217 (20%), Positives = 87/217 (40%), Gaps = 11/217 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++          +++  + H+ LA+   ++ +   GSG+  +     K+   + +   +
Sbjct: 3   FSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQV---GSGIYNFLPLAKKVLDKIENITHK 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++++   + I    V+   LW++SG  D Y   +   K   D       F L P      
Sbjct: 60  RMQEHGAQNILMSFVVLASLWERSGRLDKYGKELLVFKDRKDN-----DFVLSPTLEENI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
             +  + +KSY++LPV L +  + +R+E      GL+R R F   D + F    E +  E
Sbjct: 115 TEIAANFIKSYKQLPVHLYQIHTKFRDEIRPRF-GLVRAREFIMKDGYSFHEDAESLDKE 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            L   N    I  D G +  +V+  +       S   
Sbjct: 174 FLNTQNAYKEILSDLGLDFRIVEADSGAIGGSKSREF 210



 Score = 65.2 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 21/176 (11%), Positives = 57/176 (32%), Gaps = 10/176 (5%)

Query: 475 YGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           + P  +  LK    +  + G I  +         A +++ +  K     +     G    
Sbjct: 400 HCPNCQGALK--YHKSLEVGHIFKLGQGYAKSLKASFLDKNG-KERFFEMGCYGIGISRL 456

Query: 534 FIGIMIENFKGNLPLWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFR 587
              I+ +       +W    +P   ++        +  + A E+   L+   +    D R
Sbjct: 457 LSAILEQKSDDLGCVWTKNTAPFDVVIVVSNWKDEAQKKLAFEVYERLRQKGVDALLDDR 516

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +     K+R+  +    +++I G +    +     +  +   Q +   +    + +
Sbjct: 517 DARFGAKMRDFELIGERLVLIVGKQTLESKEFECIKRANLEKQVLKDTELEEKILE 572


>gi|291536627|emb|CBL09739.1| Uridine kinase [Roseburia intestinalis M50/1]
          Length = 556

 Score =  114 bits (286), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 40/200 (20%), Positives = 76/200 (38%), Gaps = 7/200 (3%)

Query: 13  SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLA 71
             K +P   +   +A+          V    N ++ +L   V+ +G +  +T  D     
Sbjct: 13  KEKTYPAGVSFLSIAQEYQDQYEDDIVLALYNNRLRELKKTVKKDGELSFLTTSDKTGKR 72

Query: 72  VIRHSCAHIMAEAVQSIWPEVQVAIGP--IIEDGFYYDFDKEQ---PFSSDELAQIEKKM 126
             R S   +M +AV ++W    + +     I  G+Y +  K+      +   +  ++K+M
Sbjct: 73  AYRRSVTLLMQKAVYNLWGREHIGVYVRYAIGQGYYCELMKDGESCKITETMIGALKKEM 132

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGP 186
             ++  D P  K  ++ ++A  LF       K E L        V +Y    + D   G 
Sbjct: 133 YRLVMADLPIEKYSMNTDEAVALFHELGMKDK-EKLFRYRRSSRVNIYELDHYKDYFYGF 191

Query: 187 HVRSTGQVKKFFKLMKVAGA 206
            V STG ++ +       G 
Sbjct: 192 MVPSTGYLRYYDMTAYQDGF 211


>gi|195331460|ref|XP_002032419.1| GM23523 [Drosophila sechellia]
 gi|194121362|gb|EDW43405.1| GM23523 [Drosophila sechellia]
          Length = 1094

 Score =  114 bits (285), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 59/295 (20%), Positives = 97/295 (32%), Gaps = 62/295 (21%)

Query: 370 RNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLS 428
           R E        +R R F   + H  F  KE+   E L I +L   +Y       ++    
Sbjct: 733 RWEFKQPT-PFLRTREFLWQEGHTAFADKEEAAKEVLDILDLYALVYTHLLAIPVVKGRK 791

Query: 429 TRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIG 488
           T  EK  G D                                    Y    E     A G
Sbjct: 792 TEKEKFAGGD------------------------------------YTTTVE-AFISASG 814

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  Q  T   +  N    F   Y +  +++     +++  +G   R IG+MI     N  
Sbjct: 815 RAIQGATSHHLGQNFSKMFEIVYEDPETQQKK--YVYQNSWGLTTRTIGVMIMVHADNQG 872

Query: 548 LWLSP----IQAIVTTITSSA----------VEYAQEIANLLKSHHLSIETDFRNE-TIN 592
           L L P    IQAIV     +           ++  + +   L    +  E D+R+  +  
Sbjct: 873 LVLPPHVACIQAIVVPCGITVNTKDDERAQLLDACKALEKRLVGGGVRCEGDYRDNYSPG 932

Query: 593 YKIREHSIKKIPIIIICGDKEASERS-IGIRRFGSTTTQKVSLLDA---IPILTK 643
           +K     +K +P+ +  G K+   +  + +R   +     + L D    IP L +
Sbjct: 933 WKFNHWELKGVPLRLEVGPKDLKAQQLVAVR-RDTGEKITIPLADVEKKIPALLE 986


>gi|154490013|ref|ZP_02030274.1| hypothetical protein PARMER_00242 [Parabacteroides merdae ATCC
           43184]
 gi|154089455|gb|EDN88499.1| hypothetical protein PARMER_00242 [Parabacteroides merdae ATCC
           43184]
          Length = 555

 Score =  114 bits (285), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 42/220 (19%), Positives = 81/220 (36%), Gaps = 3/220 (1%)

Query: 1   MPSDIKLTFPDGSI-KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGS 58
           M   I +   + +  K  P+ ++  D+   +   L  + +   +N K   L+        
Sbjct: 1   MSETITIYCKNNNTYKEVPIGSSLLDIYSLVGAPLRLRPMNAQVNNKTEGLTFRCWHPKD 60

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           +E +       +     S  HI ++AV  + P   + +   I  G+Y      +    + 
Sbjct: 61  VEYVDYTQLSGMRTYVRSLCHIFSKAVNDVLPSATLNLEHPISKGYYCVIHNGKDIDEET 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           + +I+K+M+EII  D PF  + +    A  LF  +    K  ++ES       + Y    
Sbjct: 121 IGKIKKRMREIIDADLPFHLKTIRTIDAAVLFRERGMNDKARLIES-AGMPYTSYYELDG 179

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLS 218
           + +   G    STG ++ F  +    G   R         
Sbjct: 180 YINYFYGCLTPSTGYIQVFDLVPYFDGVLLRVPQRTNPTE 219


>gi|329569947|gb|EGG51702.1| proline--tRNA ligase [Enterococcus faecalis TX1467]
          Length = 516

 Score =  114 bits (285), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 41/198 (20%), Positives = 79/198 (39%), Gaps = 13/198 (6%)

Query: 283 MRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           MR + +  D  E+  P +L   LW++SG +++Y  N++ +K  +D     R + L P + 
Sbjct: 1   MREEFEKIDAVEMLMPALLPAELWKESGRYETYGPNLYRLKDRND-----RDYILGPTHE 55

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
                +    + SY+ LP+ L +  + YR+E      GL+R R F   D + F   E   
Sbjct: 56  ETFTELIRDEINSYKRLPLNLYQIQTKYRDEKRPR-SGLLRGREFIMKDGYSFHADEASL 114

Query: 402 NECLKIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQ 460
           ++  + +      I++  G E   +           S      +E     +  + ++   
Sbjct: 115 DQSYRDYEKAYSRIFERCGLEFRAIIGDGGAMGGKDSKEFMAISEIGEDTICYSTESDYA 174

Query: 461 DRINTGVLLGEGAFYGPK 478
             +         + Y PK
Sbjct: 175 ANLEMAT-----SLYTPK 187



 Score = 64.0 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 23/140 (16%), Positives = 49/140 (35%), Gaps = 9/140 (6%)

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG----NLPLWLSPIQAIVTTITSS-- 563
            V   + +   V++     G   R +  ++E        N P  ++P    V  +     
Sbjct: 369 TVLDENGREKSVIMGCYGIGVS-RLLSAIVEQNADERGINWPTGIAPFDLHVVQMNVKDE 427

Query: 564 -AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
              + +QE+  ++      +  D RNE    K  +  +   PI I  G K   +  + ++
Sbjct: 428 YQTKLSQEVEAMMTEAGYEVLVDDRNERAGVKFADADLIGCPIRITVGKKAV-DGVVEVK 486

Query: 623 RFGSTTTQKVSLLDAIPILT 642
              +    +V   +    L+
Sbjct: 487 IKRTGEMLEVRKEELESTLS 506


>gi|123965807|ref|YP_001010888.1| prolyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515]
 gi|152112942|sp|A2BVH0|SYP_PROM5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|123200173|gb|ABM71781.1| Prolyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515]
          Length = 600

 Score =  114 bits (285), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 46/231 (19%), Positives = 96/231 (41%), Gaps = 8/231 (3%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
            E+E   H+ L +   +  +    SG+  +     K+ + + + + +++ +    ++  P
Sbjct: 17  SEAEIISHQLLLKGGYIRRV---NSGIYAYMPIMLKVIEKISNIIEKELNNNGCSKLLLP 73

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           Q+    LW++S  W+ Y A    +    D  +  + F L P +      + +  + SY++
Sbjct: 74  QLHPAELWKRSERWEGYTAGEGIMFNLKD--RQGKEFGLAPTHEEVITNIASEIINSYKQ 131

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYK 416
           LP+   +  + +R+E      GLMR R F   D + F  +KE + +   K+     +I+K
Sbjct: 132 LPLCFYQIQTKFRDEIRPRF-GLMRSREFIMKDGYSFHSSKEDLSSFYEKMERSYENIFK 190

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGV 467
           + G + + V   +       S      A+     +L T   S    I   +
Sbjct: 191 NCGLDTVGVDADSGAIGGAASKEFMVTADAGEDYILFTESGSYAANIEKAI 241



 Score = 71.0 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 61/167 (36%), Gaps = 13/167 (7%)

Query: 488 GRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN 545
            R  + G I Q+      + NA + +   +  +   +    +G  + R     IE     
Sbjct: 430 KRGIEIGHIFQLGQKYSEKLNAKFSDKDGKLKN---LWMGCYGIGVTRIAQAAIEQNHDE 486

Query: 546 ----LPLWLSPIQAIVTTITSS---AVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
                P+ +SP + ++           +  +EI    +S  + +  D R+     K ++ 
Sbjct: 487 NGISWPIQISPFEILIIPTNLKDPYQTKLTEEIYKEFESKKIDVLLDDRDVRAGVKFKDA 546

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
            +  IP  II G +++  + +      S    K+S  + +     ES
Sbjct: 547 DLIGIPFQIIIG-RDSINKEVEFICRSSKRKIKISSQNLLEKFISES 592


>gi|229496613|ref|ZP_04390327.1| phosphoribulokinase family protein [Porphyromonas endodontalis ATCC
           35406]
 gi|229316510|gb|EEN82429.1| phosphoribulokinase family protein [Porphyromonas endodontalis ATCC
           35406]
          Length = 555

 Score =  114 bits (285), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 44/231 (19%), Positives = 90/231 (38%), Gaps = 2/231 (0%)

Query: 17  FPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPEDPRSLAVIRH 75
                T  ++A+   + L  K +   +N     L++ + +   +  +   +         
Sbjct: 17  VNKGITILELAKKYEQELGFKPINCRMNNNTVGLTEKITKSCELFFVGLNEESGQRTYFR 76

Query: 76  SCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSP 135
           + + I+++AV+ + P  ++ +   + +G+Y         +  ELA I  +M EIIA D P
Sbjct: 77  TLSFILSKAVREVIPTSRLRVEHSLSNGYYCSIKNGHEVTDQELANITIRMDEIIAADLP 136

Query: 136 FLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVK 195
           F+ +  S E+A ++F    E  K  +LE+      +T      + D   G    STG + 
Sbjct: 137 FVTRTASQEEAVKVFRDLGEEDKATLLETYNV-PFITYQELDGYPDTYYGSLAPSTGYIH 195

Query: 196 KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDH 246
            +     + G   R  S          T     +E+ +    L +  +  +
Sbjct: 196 IYSIERYLDGFLVRVPSRTNPNELAPLTEQPKLREVLKDQKELIQMLEIPY 246


>gi|157412925|ref|YP_001483791.1| prolyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215]
 gi|166980140|sp|A8G3M4|SYP_PROM2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|157387500|gb|ABV50205.1| Prolyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215]
          Length = 600

 Score =  114 bits (285), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 53/259 (20%), Positives = 101/259 (38%), Gaps = 15/259 (5%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
            E+E   H+ L +   +  +    SG+  +     ++ + + + + R++      ++  P
Sbjct: 17  SEAEIISHQLLLQAGYIRRV---NSGIYAYMPIMLRVIEKISAIIERELNSIGCTKLLLP 73

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           Q+    LW++S  W+ Y A    +    D  +  + F L P +     ++ +  + SY++
Sbjct: 74  QLHPADLWRKSERWEGYTAGEGIMFNLKD--RQGKEFGLAPTHEEVITSIASETINSYKQ 131

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYK 416
           LP    +  + +R+E      GLMR R F   D + F + E+       K+ N   +I+K
Sbjct: 132 LPQCFYQIQTKFRDEIRPRF-GLMRSREFIMKDGYSFHSSEKDLASFYEKVGNAYENIFK 190

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
             G E + V+  +       S      A+     +L T   S    I   V L       
Sbjct: 191 SCGLETVGVEADSGAIGGASSKEFMVTADAGEDSILFTKSGSYAANIEKAVSL------- 243

Query: 477 PKFEYILKDAIGRDWQCGT 495
           P     +KD I    +   
Sbjct: 244 PSQPIPIKDNIAEWLETPH 262



 Score = 77.9 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 32/181 (17%), Positives = 66/181 (36%), Gaps = 15/181 (8%)

Query: 476 GPKFEYILKDAIG--RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-I 531
           G K      + +   +  + G I Q+      + NA + +      +   +    +G  +
Sbjct: 416 GDKISIANDEELKEKKGIEIGHIFQLGQKYSEKLNAKFSDKDGTLKN---LWMGCYGIGV 472

Query: 532 ERFIGIMIENFKGN----LPLWLSPIQAIVTTITSS---AVEYAQEIANLLKSHHLSIET 584
            R     IE          P+ +SP + I+           E  ++I N    + + +  
Sbjct: 473 TRIAQAAIEQNHDQKGICWPIQISPFEVIIIPTNLKDPIQSELTEQIYNNFLINKIDVLL 532

Query: 585 DFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           D RN+    K ++  +  IP  II G +++  + + +    + T  K+S    +     E
Sbjct: 533 DDRNDRAGVKFKDAELIGIPFQIIIG-RDSVNKEVELLSRTNNTKFKISTDKLLETFISE 591

Query: 645 S 645
           S
Sbjct: 592 S 592


>gi|291541032|emb|CBL14143.1| Uridine kinase [Roseburia intestinalis XB6B4]
          Length = 561

 Score =  114 bits (285), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 40/200 (20%), Positives = 76/200 (38%), Gaps = 7/200 (3%)

Query: 13  SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLA 71
             K +P   +   +A+          V    N ++ +L   V+ +G +  +T  D     
Sbjct: 18  KEKTYPAGVSFLSIAQEYQDQYEDDIVLALYNNRLRELKKTVKKDGELSFLTTSDKTGKR 77

Query: 72  VIRHSCAHIMAEAVQSIWPEVQVAIGP--IIEDGFYYDFDKEQ---PFSSDELAQIEKKM 126
             R S   +M +AV ++W    + +     I  G+Y +  K+      +   +  ++K+M
Sbjct: 78  AYRRSVTLLMQKAVYNLWGREHIGVYVRYAIGQGYYCELMKDGESCKITETMIGALKKEM 137

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGP 186
             ++  D P  K  ++ ++A  LF       K E L        V +Y    + D   G 
Sbjct: 138 YRLVMADLPIEKYSMNTDEAVALFHELGMKDK-EKLFRYRRSSRVNIYELDHYKDYFYGF 196

Query: 187 HVRSTGQVKKFFKLMKVAGA 206
            V STG ++ +       G 
Sbjct: 197 MVPSTGYLRYYDVTAYQDGF 216


>gi|50729875|ref|XP_416683.1| PREDICTED: hypothetical protein [Gallus gallus]
          Length = 344

 Score =  114 bits (285), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 57/253 (22%), Positives = 105/253 (41%), Gaps = 33/253 (13%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPEDPRSLAV---IRHS 76
           +T  + A  +S    KK+V   ++G+V D+  P+ +   I+ +T +D     V      S
Sbjct: 79  STPYNCAMHLSEWHCKKSVLALVDGEVWDMYRPLTKSCEIQFLTFKDEDPEEVNKAYWRS 138

Query: 77  CAHIMAEAVQSIWPE------VQVAIGPIIEDGFYYDFDKEQPFSS-----DELAQIEKK 125
           CA IMA  ++  + +      V+    P+I   F YD   +   +      D    + + 
Sbjct: 139 CAMIMANVLKRAFKDEYSVTLVKSPEVPVISGAFCYDVILDNRLNDWKPAKDNFRSLTRD 198

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPA---KENVTLYRQGEWFDL 182
             ++I +D PF   ++  + ARE+   +   YK+E++E   +   +  V L+R G++ D+
Sbjct: 199 ANKLIDKDLPFETLHVEAKVAREM--FQHNKYKMELIEQKASQNMEGIVVLHRFGDFVDV 256

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
             GPH+  T     F    ++  A+    S   ++ R  G +             L    
Sbjct: 257 SEGPHIPRTS----FCFQYEITAAHILQTSQSELIRRFQGVSLPIH---------LRAHH 303

Query: 243 KRDHRKLAREMDL 255
              H+ L R   L
Sbjct: 304 TVWHKLLERSKKL 316


>gi|254525440|ref|ZP_05137492.1| prolyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
 gi|221536864|gb|EEE39317.1| prolyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
          Length = 598

 Score =  114 bits (285), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 56/273 (20%), Positives = 103/273 (37%), Gaps = 15/273 (5%)

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR 284
             T   L        E+E   H+ L +   +  +    SG+  +     ++ + + + + 
Sbjct: 1   MTTSFPLGTLRDTPSEAEIISHQLLLQAGYIRRV---NSGIYAYMPIMLRVIEKISAIIE 57

Query: 285 RKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPG 343
           R++      ++  PQ+    LW++S  W+ Y A    +    D  +  + F L P +   
Sbjct: 58  RELNSIGCTKLLLPQLHPADLWRKSERWEGYTAGEGIMFNLKD--RQGKEFGLAPTHEEV 115

Query: 344 HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE 403
             ++ +  + SY++LP    +  + +R+E      GLMR R F   D + F + E+    
Sbjct: 116 ITSIASETINSYKQLPQCFYQIQTKFRDEIRPRF-GLMRSREFIMKDGYSFHSSEKDLAS 174

Query: 404 CL-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
              K+ N   +I+K  G E + V+  +       S      A+     +L T   S    
Sbjct: 175 FYEKVGNAYENIFKSCGLETVGVEADSGAIGGASSKEFMVTADAGEDSILFTKSGSYAAN 234

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGT 495
           I   V L       P     LKD I    +   
Sbjct: 235 IEKAVSL-------PSQPIPLKDNIAEWLETPH 260



 Score = 78.3 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 32/181 (17%), Positives = 67/181 (37%), Gaps = 15/181 (8%)

Query: 476 GPKFEYILKDAIG--RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-I 531
           G K      + +   +  + G I Q+      + NA + +   +  +   +    +G  +
Sbjct: 414 GDKISIANDEELKEKKGIEIGHIFQLGQKYSEKLNAKFSDKDGKLKN---LWMGCYGIGV 470

Query: 532 ERFIGIMIENFKGN----LPLWLSPIQAIVTTITSS---AVEYAQEIANLLKSHHLSIET 584
            R     IE          P+ +SP + I+           E  ++I N    + + +  
Sbjct: 471 TRIAQAAIEQNHDQKGICWPIQISPFEVIIIPTNLKDPIQSELTEQIYNNFLINKIDVLL 530

Query: 585 DFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           D RN+    K ++  +  IP  II G +++  + + +    + T  K+S    +     E
Sbjct: 531 DDRNDRAGVKFKDAELIGIPFQIIIG-RDSVNKEVELLSRTNNTKFKISTDKLLETFISE 589

Query: 645 S 645
           S
Sbjct: 590 S 590


>gi|29840011|ref|NP_829117.1| prolyl-tRNA synthetase [Chlamydophila caviae GPIC]
 gi|81838013|sp|Q824A9|SYP_CHLCV RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|29834358|gb|AAP04995.1| prolyl-tRNA synthetase [Chlamydophila caviae GPIC]
          Length = 577

 Score =  114 bits (285), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 40/218 (18%), Positives = 91/218 (41%), Gaps = 9/218 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q          +E+    +  L +   +F  A+   G+  +    W++   ++  +R 
Sbjct: 3   TSQLFYKTSKNANKEAAVLSYELLEKAGYIFKTAK---GIYTYTPLFWRVALKMMDIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +E+  P +    LWQ++G W+++R+        D   ++ +   L P +    
Sbjct: 60  ELNAIGGQELVLPILHPAELWQKTGRWEAFRSEGLLYTLTD---REDKELCLAPTHEEVV 116

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNE 403
               +  L   ++LP+ L +  + +R+E      GLMR R F  +D++ F  + EQM  +
Sbjct: 117 SMFVSQWLSGRKQLPIHLYQIATKFRDEIRPRF-GLMRAREFLMEDSYTFSDSPEQMNEQ 175

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALW 441
             K+     +I+     + ++V+       +  S+   
Sbjct: 176 YAKLRQAYQNIFDRLEIKYVIVEADGGKIGKGKSEEFH 213



 Score = 64.4 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 29/137 (21%), Positives = 54/137 (39%), Gaps = 8/137 (5%)

Query: 500 FNLPSRF-NAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN----LPLWLSPI 553
           FNL +R+   F V   +E+          +G  I R +   IE    +     P  ++P 
Sbjct: 415 FNLGTRYTECFEVGFQNEQEEQQTCWMGTYGIGIGRTLAACIEQLADDRGIVWPKAIAPF 474

Query: 554 QAIVTTITSSAV--EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
              +      A   E A++I   L+++  +   D RNE + +K+++  +  IP  +I G 
Sbjct: 475 DIAILYNGGDAASQEAAEKIYKDLQNYGYAPLLDDRNERLGFKLKDSDLIGIPYKLILGK 534

Query: 612 KEASERSIGIRRFGSTT 628
              +   + I       
Sbjct: 535 TFQNSGVLEIESRSREK 551


>gi|111023587|ref|YP_706559.1| prolyl-tRNA synthetase [Rhodococcus jostii RHA1]
 gi|122955090|sp|Q0S235|SYP1_RHOSR RecName: Full=Prolyl-tRNA synthetase 1; AltName: Full=Proline--tRNA
           ligase 1; Short=ProRS 1
 gi|110823117|gb|ABG98401.1| proline--tRNA ligase [Rhodococcus jostii RHA1]
          Length = 581

 Score =  114 bits (284), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 46/251 (18%), Positives = 94/251 (37%), Gaps = 22/251 (8%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           ++E   H+ L R   +  IA    GV  W   G ++ + +   +R ++     +EI+ P 
Sbjct: 19  DAEVPSHKLLVRAGYVRRIA---PGVYSWLPLGLRVLREVERVVREEMNGIGAQEISLPA 75

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +L +  ++ S  W  Y   +F +K      +    + L P +             SY++ 
Sbjct: 76  LLPREPYEASNRWTEYGDGLFRLKD-----RKGGDYLLGPTHEELFALTVKGEYNSYKDF 130

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKD 417
           PV L +  + YR+E      G++R R F   D++ F   ++      + H      I+  
Sbjct: 131 PVTLYQVQTKYRDEERPR-AGILRGREFVMKDSYSFDLTDEGLTASYRAHRDAYERIFSR 189

Query: 418 FGFEKIMVKLSTRPE-----------KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
            G + ++V  ++                +G D      E+     ++ +K  + + +   
Sbjct: 190 LGVKYVIVSATSGAMGGSASEEFLAESEIGEDTYVRCLESGYAANVEAVKTLAPEAVPFD 249

Query: 467 VLLGEGAFYGP 477
            L        P
Sbjct: 250 GLPAAKVHDTP 260



 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/174 (13%), Positives = 57/174 (32%), Gaps = 34/174 (19%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNL 546
           R  + G + Q+       F+   +  + +   P M    V   + R + ++ E +     
Sbjct: 419 RGIEIGHVFQLGRKYTDVFSVDVLGENGKPVRPTMGSYGV--GVSRLVAVIAEQHHDEKG 476

Query: 547 PLWLSP-----IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             W +      +  ++     +A E A+ +A  L    L +  D R  +   K ++  + 
Sbjct: 477 LRWPAEVSPADVHVVIANKDETAREGAEGLAAELDKAGLEVILDDRKASPGVKFKDSELL 536

Query: 602 ------------KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
                                     E  + +R   +  +++V+   A+  + K
Sbjct: 537 GVPLVVVVGRGWG-------------EGKVEVRDRFTGESREVAAESALSEIVK 577


>gi|317181547|dbj|BAJ59331.1| prolyl-tRNA synthetase [Helicobacter pylori F57]
          Length = 577

 Score =  114 bits (284), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 43/217 (19%), Positives = 86/217 (39%), Gaps = 11/217 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++          +++  + H+ LA+   ++ +   GSG+  +     K+   + +   +
Sbjct: 3   FSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQV---GSGIYNFLPLAKKVLDKIENITHK 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++++   + I    V+   LW++SG  D Y   +   K   D       F L P      
Sbjct: 60  RMQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKDN-----DFVLSPTLEENI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
             +  + +KSY++LPV L +  + +R+E      GL+R R F   D + F    E +  E
Sbjct: 115 TEIAANFIKSYKQLPVHLYQIHTKFRDEIRPRF-GLVRAREFIMKDGYSFHEDTESLDKE 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
                +    I  D G +  +V+  +       S   
Sbjct: 174 FSNTQSAYKEILSDLGLDFRIVEADSGAIGGSKSREF 210



 Score = 64.0 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 18/164 (10%), Positives = 51/164 (31%), Gaps = 8/164 (4%)

Query: 487 IGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
             +  + G I  +         A +++ +  K     +     G       I+ +     
Sbjct: 410 YHKSLEVGHIFKLGQGYAKSLKASFLDKNG-KERFFEMGCYGIGISRLLSAILEQKSDDL 468

Query: 546 LPLWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
             +W    +P   ++        +  + A E+   L+   +    D R+     K+R+  
Sbjct: 469 GCVWTKNTAPFDVVIVVSNWKDEAQKKLAFEVYERLRQKGVDALLDDRDARFGAKMRDFE 528

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +    + +I G +    +     +  +   Q +   +    + +
Sbjct: 529 LIGERLALIVGKQTLESKEFECIKRANLEKQTLKDTELEEKILE 572


>gi|325972878|ref|YP_004249942.1| prolyl-tRNA synthetase [Mycoplasma suis str. Illinois]
 gi|323651480|gb|ADX97562.1| prolyl-tRNA synthetase [Mycoplasma suis str. Illinois]
          Length = 463

 Score =  114 bits (284), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 75/396 (18%), Positives = 137/396 (34%), Gaps = 59/396 (14%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG  F H +G  I++ + S++  +        +  P +L    +Q+    +S   N+  +
Sbjct: 23  SGTFFLHPRGCFIWEQIQSFLNAEFSKLGVSNVLFPALLPFQKFQE-EQKNSETLNLEEI 81

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR-ELPVRLAEFGSVYRNEPSGSLHGL 380
               ++  +    AL+P +       F   LK    +LP  L ++ SVYR E   +    
Sbjct: 82  MRLHNSKSEQSVVALRPTSEILFSHYFKERLKERDIKLPFLLNQWSSVYREER--NTKLF 139

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            R + F   + H     ++  +  L+  + I                             
Sbjct: 140 FRSKEFYWQELHSLHENQKDLDFHLEKIHEIYKKL------------------------- 174

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDF 500
                  ++ +L     + +  I   +    GA      E IL D  G+  Q  T     
Sbjct: 175 -------LRELLCIEYITGEKTI---LERFPGAQKTLTNECILPD--GQSLQLTTTHDLS 222

Query: 501 NLPSRFNAFYV-NSHSEKCHPVMIHRAVFGSIERFIGIMIENFK---GNLPLW-LSPIQA 555
           N  S+        ++  +  P+ +     GS  R IG ++E  K   G +  W LS    
Sbjct: 223 NFFSKLMDIKYWGANDIEMTPLQLSA---GSSTRLIGALVEMHKDSVGVILPWNLSKENI 279

Query: 556 IVTTITSSAVE----YAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
            +  +  +  E    Y   I   L   +  +  D    +   KI +     IP+ +I G 
Sbjct: 280 AILLLGENRDEETISYISSIREKL--CNYRLHIDDSYSSFGKKINKVERLGIPVSLIIGQ 337

Query: 612 KEASERSIGIRRFGSTTTQKVS---LLDAIPILTKE 644
           +E   + I I+   S +  +     L + I   +KE
Sbjct: 338 QEIKNKKITIKSRLSESKYECDLSNLENEISRFSKE 373


>gi|168704391|ref|ZP_02736668.1| threonyl-tRNA synthetase [Gemmata obscuriglobus UQM 2246]
          Length = 142

 Score =  114 bits (284), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 44/135 (32%), Positives = 71/135 (52%), Gaps = 7/135 (5%)

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
                L+PM CP H+ V+    +SYR+LP+R+AE G++YR E SG + GL RVR  T +D
Sbjct: 8   DEKLCLRPMCCPHHIQVYKSKARSYRDLPIRIAELGNMYRFERSGVVGGLSRVRCMTLND 67

Query: 391 AHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK-------RVGSDALWDD 443
           AH+F   +Q+ +E   +  L+   Y D G  +   +LS   +         V + A+W+ 
Sbjct: 68  AHLFVRPDQVKHEIAGVLQLMKKAYADLGITEYRFRLSKNADPDGPPSDKYVDNPAMWES 127

Query: 444 AENIMKGVLDTIKNS 458
           +  +++ VL      
Sbjct: 128 STKMLREVLQESGMP 142


>gi|168182194|ref|ZP_02616858.1| putative threonyl-tRNA synthetase/uridine kinase [Clostridium
           botulinum Bf]
 gi|237793515|ref|YP_002861067.1| putative threonyl-tRNA synthetase/uridine kinase [Clostridium
           botulinum Ba4 str. 657]
 gi|182674718|gb|EDT86679.1| putative threonyl-tRNA synthetase/uridine kinase [Clostridium
           botulinum Bf]
 gi|229261032|gb|ACQ52065.1| putative threonyl-tRNA synthetase/uridine kinase [Clostridium
           botulinum Ba4 str. 657]
          Length = 552

 Score =  114 bits (284), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 58/237 (24%), Positives = 97/237 (40%), Gaps = 2/237 (0%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           +KL  P+GS        T  DV +          V   I+ +  +L+  V+ EG    + 
Sbjct: 4   LKLYMPNGSNILVSGDKTLYDVVKENKLEDNIPIVLGKIDEEYYELTSTVKKEGVFIPVD 63

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
             D   L     +   I  +AV  ++PE  V I   +  G Y +  K+   + +++ +I+
Sbjct: 64  ITDSIGLKTYVRTLQFIFIKAVLDLYPESTVVIEHSLGKGLYGEIHKKLSLNENDILKIK 123

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            KM EII +D    K  +  E+A E+F+  K   KV +L  IP +E V LY     +D  
Sbjct: 124 NKMNEIINKDIKIKKISVKKERAIEIFKEYKMKDKVRLLSHIPHEE-VKLYELDGRYDYF 182

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
            GP   STG +K F  +    G   R    +   +      +    ++ +      +
Sbjct: 183 YGPMAYSTGAIKNFDIMYYDPGFILRYPREKDPFNIPEFVEYKKLTKIFRETEKWAK 239


>gi|34763882|ref|ZP_00144786.1| Prolyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
 gi|27886345|gb|EAA23616.1| Prolyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
          Length = 175

 Score =  114 bits (284), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 40/169 (23%), Positives = 71/169 (42%), Gaps = 10/169 (5%)

Query: 220 IYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTL 279
           + G    ++  +       +E+E   H+ + R   +  +A   SG+  +   G++  + +
Sbjct: 1   MEGKMRFSKAYIKTLKETPKEAEIASHKLMLRAGMIKKLA---SGIYAYLPLGYRTIKKI 57

Query: 280 ISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKP 338
            + +R ++      E+  P V    LWQ+SG WD     M  +K      +  R F L P
Sbjct: 58  ENIVREEMDRAGALELLMPVVQPAELWQESGRWDVMGPEMLRLKD-----RHERDFVLSP 112

Query: 339 MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
                  A+    + SY+ LP+ L    + +R+E      GLMR RG  
Sbjct: 113 TQEEMITAIVRSDISSYKSLPINLYHIQTKFRDERRPRF-GLMRGRGIY 160


>gi|15611293|ref|NP_222944.1| prolyl-tRNA synthetase [Helicobacter pylori J99]
 gi|11135064|sp|Q9ZMJ6|SYP_HELPJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|4154734|gb|AAD05795.1| PROLYL-TRNA SYNTHETASE [Helicobacter pylori J99]
          Length = 576

 Score =  113 bits (283), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 42/192 (21%), Positives = 76/192 (39%), Gaps = 8/192 (4%)

Query: 251 REMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSG 309
                 +I + GSG+  +     K+   + +   +++++   + I    V+   LW++SG
Sbjct: 25  HPGKAGYIYQIGSGIYNFLPLAKKVLDKIENVTHKRMQEHGAQNILMSFVVLASLWEKSG 84

Query: 310 HWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVY 369
             D Y   +   K   D       F L P        +  + +KSY++LPV L +  + +
Sbjct: 85  RLDKYGKELLVFKDRKDN-----DFVLSPTLEENITEIAANFIKSYKQLPVHLYQIHTKF 139

Query: 370 RNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLS 428
           R+E      GL+R R F   D + F    E +  E L   +    I  D G +  +V+  
Sbjct: 140 RDEIRPRF-GLVRAREFIMKDGYSFHEDAESLDKEFLNTQSAYKEILSDLGLDFRIVEAD 198

Query: 429 TRPEKRVGSDAL 440
           +       S   
Sbjct: 199 SGAIGGSKSREF 210



 Score = 61.0 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 21/165 (12%), Positives = 58/165 (35%), Gaps = 10/165 (6%)

Query: 487 IGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
             +  + G I  +  +      A +++ +  K     +     G I R + +++E    +
Sbjct: 409 YHKSLEVGHIFKLGQSYAKSLKASFLDKNG-KERFFEMGCYGIG-ISRLLSVILEQKSDD 466

Query: 546 L-PLWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           L  +W    +P   ++        +  + A E+   L    +    D R+     K+R+ 
Sbjct: 467 LGCVWTKNTAPFDVVIVVSNLKDEAQKKLAFEVYERLLQKGVDALLDDRDARFGAKMRDF 526

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +    + +I G +    +     +  +   Q +  ++    + +
Sbjct: 527 ELIGERLALIVGKQTLESKEFECIKRANLEKQTIKDIELEEKILE 571


>gi|325989371|ref|YP_004249070.1| prolyl-tRNA synthetase [Mycoplasma suis KI3806]
 gi|323574456|emb|CBZ40106.1| Prolyl-tRNA synthetase [Mycoplasma suis]
          Length = 463

 Score =  113 bits (283), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 75/396 (18%), Positives = 137/396 (34%), Gaps = 59/396 (14%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SG  F H +G  I++ + S++  +        +  P +L    +Q+    +S   N+  +
Sbjct: 23  SGTFFLHPRGCFIWEQIQSFLNAEFSKLGVSNVLFPALLPFQKFQE-EQKNSETLNLEEI 81

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR-ELPVRLAEFGSVYRNEPSGSLHGL 380
               ++  +    AL+P +       F   LK    +LP  L ++ SVYR E   +    
Sbjct: 82  MRLHNSKSEQSVVALRPTSEILFSHYFRERLKERDIKLPFLLNQWSSVYREER--NTKLF 139

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            R + F   + H     ++  +  L+  + I                             
Sbjct: 140 FRSKEFYWQELHSLHENQKDLDFHLEKIHEIYKKL------------------------- 174

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDF 500
                  ++ +L     + +  I   +    GA      E IL D  G+  Q  T     
Sbjct: 175 -------LRELLCIEYITGEKTI---LERFPGAQKTLTNECILPD--GQSLQLTTTHDLS 222

Query: 501 NLPSRFNAFYV-NSHSEKCHPVMIHRAVFGSIERFIGIMIENFK---GNLPLW-LSPIQA 555
           N  S+        ++  +  P+ +     GS  R IG ++E  K   G +  W LS    
Sbjct: 223 NFFSKLMDIKYWGANDIEMTPLQLSA---GSSTRLIGALVEMHKDSVGVILPWNLSKENI 279

Query: 556 IVTTITSSAVE----YAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
            +  +  +  E    Y   I   L   +  +  D    +   KI +     IP+ +I G 
Sbjct: 280 AILLLGENRDEETISYISSIREKL--CNYRLHIDDSYSSFGKKINKVERLGIPVSLIIGQ 337

Query: 612 KEASERSIGIRRFGSTTTQKVS---LLDAIPILTKE 644
           +E   + I I+   S +  +     L + I   +KE
Sbjct: 338 QEIKNKKITIKSRLSESKYECDLSNLENEISRFSKE 373


>gi|257414233|ref|ZP_05591947.1| uridine kinase [Roseburia intestinalis L1-82]
 gi|257200735|gb|EEU99019.1| uridine kinase [Roseburia intestinalis L1-82]
          Length = 344

 Score =  113 bits (283), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 40/200 (20%), Positives = 76/200 (38%), Gaps = 7/200 (3%)

Query: 13  SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLA 71
             K +P   +   +A+          V    N ++ +L   V+ +G +  +T  D     
Sbjct: 18  KEKTYPAGVSFLSIAQEYQDQYEDDIVLALYNNRLRELKKTVKKDGELSFLTTSDKTGKR 77

Query: 72  VIRHSCAHIMAEAVQSIWPEVQVAIGP--IIEDGFYYDFDKEQ---PFSSDELAQIEKKM 126
             R S   +M +AV ++W    + +     I  G+Y +  K+      +   +  ++K+M
Sbjct: 78  AYRRSVTLLMQKAVYNLWGREHIGVYVRYAIGQGYYCELMKDGESCKITETMIGALKKEM 137

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGP 186
             ++  D P  K  ++ ++A  LF       K E L        V +Y    + D   G 
Sbjct: 138 YRLVMADLPIEKYSMNTDEAVALFHELGMKDK-EKLFRYRRSSRVNIYELDHYKDYFYGF 196

Query: 187 HVRSTGQVKKFFKLMKVAGA 206
            V STG ++ +       G 
Sbjct: 197 MVPSTGYLRYYDVTAYQDGF 216


>gi|255527316|ref|ZP_05394195.1| conserved hypothetical protein [Clostridium carboxidivorans P7]
 gi|255509006|gb|EET85367.1| conserved hypothetical protein [Clostridium carboxidivorans P7]
          Length = 515

 Score =  113 bits (283), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 41/203 (20%), Positives = 81/203 (39%), Gaps = 2/203 (0%)

Query: 39  VAVAINGKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIG 97
           +   ING+ C+L+  + E S IE +   D         +   I+ ++V  ++PE Q+ I 
Sbjct: 1   MLGKINGEYCELTSTIEENSEIEAVNITDKLGSKTFIRTLQFILIKSVFDLFPEAQITIE 60

Query: 98  PIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAY 157
             +  G + +  K  P + +++ +I+ +M E I ++    K  +  +KA E+F + +   
Sbjct: 61  HSLSKGLFGEIHKNTPLTEEDIQKIKIRMNETIQKNIQIKKVSMDRKKAIEIFSTYRMED 120

Query: 158 KVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPML 217
           KV +L  +     V LY     +D   G    STG +  F       G   +        
Sbjct: 121 KVRLLNHVN-TATVKLYELDGRYDYFYGSMAYSTGIINVFDLKYYEPGFLLKYPIETDPF 179

Query: 218 SRIYGTAWNTQQELTQYLYFLEE 240
           +      +    ++ +       
Sbjct: 180 NIPKSAVYKKLSKIFRETEQWGN 202


>gi|207092740|ref|ZP_03240527.1| prolyl-tRNA synthetase [Helicobacter pylori HPKX_438_AG0C1]
          Length = 204

 Score =  113 bits (283), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 43/205 (20%), Positives = 85/205 (41%), Gaps = 11/205 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++          +++  + H+ LA+   ++ +   GSG+  +     K+   + +   +
Sbjct: 3   FSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQV---GSGIYNFLPLAKKVLDKIENITHK 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++++   + I    V+   LW++SG  D Y   +   K   D       F L P      
Sbjct: 60  RMQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKDN-----DFVLSPTLEENI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
             +  + +KSY++LPV L +  + +R+E      GL+R R F   D + F    E +  E
Sbjct: 115 TEIAANFIKSYKQLPVHLYQIHTKFRDEIRPRF-GLVRAREFIMKDGYSFHEDAESLDKE 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLS 428
            L   +    I  D G +  +V+  
Sbjct: 174 FLNTQSAYKEILSDLGLDFRIVEAD 198


>gi|228470901|ref|ZP_04055746.1| phosphoribulokinase family protein [Porphyromonas uenonis 60-3]
 gi|228307298|gb|EEK16312.1| phosphoribulokinase family protein [Porphyromonas uenonis 60-3]
          Length = 555

 Score =  113 bits (282), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 44/233 (18%), Positives = 96/233 (41%), Gaps = 3/233 (1%)

Query: 16  NFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPEDPRSLAVIR 74
           + P  AT   +A+S   +L  + V   +N     L   +RE   +E +   +        
Sbjct: 16  SVPPGATLYQIAQSYRTTLGFEPVNARVNNLTVALDWRLRESCQVEFVGLTEESGRHTYL 75

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQIEKKMQEIIARD 133
            S   + A+A+    P   +++   +  G++      ++  + ++LA +++++  +IA D
Sbjct: 76  RSLCLLFAKALHDELPHYHLSVRHSLSGGYFSVVKCGDKGITEEQLALVKRRIDHLIAAD 135

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQ 193
            PF ++ +  E+A ++F +  E  KV+++ S   +  VT +    + D   G  + STGQ
Sbjct: 136 LPFERRTVPAEEAVQIFTAMGEMDKVDLITS-SGQPYVTYHYLDGYPDNYYGSLLLSTGQ 194

Query: 194 VKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDH 246
           V+ +  +  + G   R  +                +E+      L       +
Sbjct: 195 VQLYDLVPYLGGVLIRVPALEKPTELTPFEPQQPMREVFDKQSRLLNLLDVSY 247


>gi|320528402|ref|ZP_08029564.1| prolyl-tRNA synthetase [Solobacterium moorei F0204]
 gi|320131316|gb|EFW23884.1| prolyl-tRNA synthetase [Solobacterium moorei F0204]
          Length = 561

 Score =  113 bits (282), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 39/216 (18%), Positives = 86/216 (39%), Gaps = 11/216 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
                       ++ +      L R      I +  +GV      G ++   + + +R +
Sbjct: 4   KNSYFFTIRENAKDEDSVSSNLLVRAGM---IKKSSAGVYMMLPMGNRVLSKIYAIIRDE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +   D +E++ P ++ + ++  SG    +   MF+++      +    + L P +     
Sbjct: 61  MNKIDCQELSMPSLIPEEVYVSSGRRAGFGKGMFSLED-----RKGVPYVLGPTHEELFA 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
                 ++SY+++P  L +  + +R+EP    +GL+RVR FT  D++ F   E   +   
Sbjct: 116 MAAKMQIRSYKDMPFSLYQIQTKFRDEPRPR-YGLIRVREFTMKDSYTFDKDEAGLDVSY 174

Query: 406 -KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            K  N   +I      +  +V+  T     + S+  
Sbjct: 175 AKQFNAYKNIMNRLHLDYRIVRADTGVMGGLLSEEF 210



 Score = 90.6 bits (223), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 26/153 (16%), Positives = 62/153 (40%), Gaps = 11/153 (7%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG----NLPLWLSPI 553
           +        +  Y++ +++  +  M    +     R +  + E        N P  L+P 
Sbjct: 411 LGTKYSKALDLQYLDQNNQLQYVWMGSYGI--GPARAMAALAEQNADENGINWPKDLAPF 468

Query: 554 QAIVTTITSSAVEYAQ---EIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           Q  V  I+    E  +   E+ + L++  + +  D R+E    K ++  +  IP  I  G
Sbjct: 469 QVAVVIISMKDEEQVRIGNELHDELQAQGIEVVLDNRDERPGVKFKDMELIGIPFRITVG 528

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +  ++  + ++   +  + +V + +AI  L +
Sbjct: 529 -RGVADGKVELKSR-TGESMEVPVTEAIDKLKE 559


>gi|258516305|ref|YP_003192527.1| phosphoribulokinase/uridine kinase [Desulfotomaculum acetoxidans
           DSM 771]
 gi|257780010|gb|ACV63904.1| phosphoribulokinase/uridine kinase [Desulfotomaculum acetoxidans
           DSM 771]
          Length = 552

 Score =  113 bits (282), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 42/244 (17%), Positives = 94/244 (38%), Gaps = 4/244 (1%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
            +K++   G+   +    +  +++ +   S     V   +N ++ DL+  V  +  I  +
Sbjct: 5   SVKIS---GNHYEYNSGTSLEEISRNFGNSPIGTIVLGTVNSELKDLTYKVEEDAEISFL 61

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
                      + S + +  +A   I+ E +V +   +  G Y         +   +A+I
Sbjct: 62  DLTTTNGQKAYKRSLSFLFIKATNDIFEEARVELCHTLSRGQYCKIINYPAINEQFVAKI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           + +M E++ +D PF+K+ L  E A +LF+ +    +   L     K N++LY   ++ D 
Sbjct: 122 KARMHELVQQDIPFVKEKLPLEYAIKLFQEETNRQEKITLFKNINKRNISLYSLDDYKDY 181

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
             G  V STG ++ F  +++  G                        ++ +         
Sbjct: 182 FHGFLVPSTGYLRLFDLVLEDQGVVILCPRKDNPNKLTQHVPQPKLLKIFRETKEWAMVM 241

Query: 243 KRDH 246
             ++
Sbjct: 242 GVNY 245


>gi|195375658|ref|XP_002046617.1| GJ12980 [Drosophila virilis]
 gi|194153775|gb|EDW68959.1| GJ12980 [Drosophila virilis]
          Length = 464

 Score =  113 bits (282), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 67/381 (17%), Positives = 127/381 (33%), Gaps = 28/381 (7%)

Query: 253 MDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHW 311
           M+L  I    +G         ++    IS ++R +++   ++I+ P +    LW+++G  
Sbjct: 34  MELGLIKSGSNGTYQIMPIAQRVVDKCISLVQRNMQEAGGQKISLPVLTPAQLWKKTGRL 93

Query: 312 DSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG-LKSYRELPVRLAEFGSVYR 370
           +   +  + V+      +  + F + P +     A+       SYR+LP+RL + G  +R
Sbjct: 94  EGDISEFYMVRD-----RSGKQFLMSPTHEEAVTAMLATAAPISYRQLPLRLYQIGPKFR 148

Query: 371 NEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
           +E      GLMR + F   D + F  +KE        + +     ++      + V+ +T
Sbjct: 149 DELKSRF-GLMRAKEFLMKDMYTFDVSKEAAECTYATVSDAYERFFRQLEVPFVKVEAAT 207

Query: 430 RPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGR 489
                  S      +      +L+                 E A   P  +      + R
Sbjct: 208 GIMGGSLSHEYHYISPVGEDTLLNCSACGYAGNAEVLGSDAETASTCPSCQ---STQLSR 264

Query: 490 DWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE----NFKG 544
                                    ++   P  +    +G  I R I   +E      + 
Sbjct: 265 VRGVEVAHTFLLGDKYSKPLGATFLNKSGKPETLQMGCYGVGITRVIAAALEVLSTEQEL 324

Query: 545 NLPLWLSPIQAIVTTITSSAVEYA------QEIANLLKSHHLSIE---TDFRNE-TINYK 594
             P  L+P    +      + E A       E+   L       E    D R E TI  +
Sbjct: 325 RWPKLLAPYDVCLIGPKQGSKEQAPVERLENELLQQLTQI-CGAEQLLHDERKELTIGKR 383

Query: 595 IREHSIKKIPIIIICGDKEAS 615
           + +      P+ I+ G K A 
Sbjct: 384 LLDAKRLGHPLTIVVGAKAAQ 404


>gi|313159214|gb|EFR58587.1| phosphoribulokinase/uridine kinase family protein [Alistipes sp.
           HGB5]
          Length = 576

 Score =  113 bits (282), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 43/240 (17%), Positives = 96/240 (40%), Gaps = 15/240 (6%)

Query: 1   MPSDIKLTFPD--GSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REG 57
           M   IK+   +  G I+   +    SDVA  ++       +A  +N ++ +L+  +    
Sbjct: 21  MADSIKVICDNLGGPIR-VAMGTPLSDVAAQLTPG-RYPFLAAFVNNRIKELNYKIYTPV 78

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSS 116
           ++  +   D   + V + +   I+ +A ++++P   + I   +   GFY + +    F+ 
Sbjct: 79  TVRFVDITDFAGIRVYQRTSWFILQKAARTLFPGHTLHIRHSMGQSGFYCELEGLDEFTH 138

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
           ++ A +E  M+E++A++ P  +  +   + R ++  +    K  +L++ P      LY  
Sbjct: 139 EQAAALEGHMREVVAQNLPIERTKVLTSELRAIYAEQGFDDKTALLDTRPRL-YSDLYTL 197

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGD--------SNRPMLSRIYGTAWNTQ 228
                   G    STG + +F       G Y            +      +++G     Q
Sbjct: 198 DGTAGYFYGALAPSTGYIDRFCIEPYYKGFYLALPLRTNPGVLNKNVQQEKMFGIFQEYQ 257


>gi|291522140|emb|CBK80433.1| Uridine kinase [Coprococcus catus GD/7]
          Length = 553

 Score =  113 bits (282), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 39/228 (17%), Positives = 83/228 (36%), Gaps = 7/228 (3%)

Query: 6   KLTFPDGS-IKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           K+    G     +    T   ++           +   ++GK+ +L+  + R+  IE IT
Sbjct: 3   KIHLKTGKGCFTYEAGTTLEAISRDFQEDYPHDIILARVDGKLAELNSCMDRDAEIEFIT 62

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQ---VAIGPIIEDGFYYDFDKEQPFSSDELA 120
             +     V R + + +M +A Q +        + +   ++ G+Y +   +   +   L 
Sbjct: 63  TGEAVGNEVYRRTASMMMLKAFQDVVGRDNFERLTVQYSLDRGYYCELVSDTAVTERLLD 122

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +++ +M EI     P +K+ L   +A E+F   K   KV  L        V +Y   +  
Sbjct: 123 KVKTRMMEIQQAKMPIIKKSLPKREAIEMFREHKMYDKV-NLFHYRRSSRVNIYMLDDTI 181

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQ 228
           D   G    +T  ++ F   +   G   +         ++       +
Sbjct: 182 DYFYGYMASNTAYIRYFDLYLYDDGFVLQMPEPSAP-EKVDAFEPPEK 228


>gi|154248833|ref|YP_001409658.1| phosphoribulokinase/uridine kinase [Fervidobacterium nodosum
           Rt17-B1]
 gi|154152769|gb|ABS60001.1| phosphoribulokinase/uridine kinase [Fervidobacterium nodosum
           Rt17-B1]
          Length = 558

 Score =  113 bits (282), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 42/201 (20%), Positives = 84/201 (41%), Gaps = 6/201 (2%)

Query: 11  DGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPEDPRS 69
           +G+       +T   +A+   +   K  V   +N  + +L  P+ + G +  IT +    
Sbjct: 9   NGNEYEIQYGSTLESIAKEYEKKSGKIIVGARMNNTIIELFRPITKSGEVTFITLDTQDG 68

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE----QPFSSDELAQIEKK 125
           + + +     I+  +V++I+ + ++ I   I  G Y +   +    +  +  ++  +E +
Sbjct: 69  MRIYQRGLFFILHASVRNIFKDSKLKILHTIGHGVYCEIRDKDNKVRQINETDIQNLEDQ 128

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M++ +  D  F K  L    A +LF S     KV++L     K+ V +Y      D   G
Sbjct: 129 MKKWVESDFKFRKSELQKSLAMDLFGSVGMEDKVKLL-KYRKKKTVKVYEADGHIDYFYG 187

Query: 186 PHVRSTGQVKKFFKLMKVAGA 206
               STG +K F  +    G 
Sbjct: 188 YMPPSTGYLKWFKIVKYDQGF 208


>gi|312077863|ref|XP_003141488.1| hypothetical protein LOAG_05904 [Loa loa]
 gi|307763347|gb|EFO22581.1| hypothetical protein LOAG_05904 [Loa loa]
          Length = 515

 Score =  112 bits (281), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 66/384 (17%), Positives = 135/384 (35%), Gaps = 45/384 (11%)

Query: 249 LAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQ 307
           + + + L           F    G +I   L+  +  ++      +I+ P +  + +WQ+
Sbjct: 116 IEKYIGLKWSLTVHFAFFF----GQRIIDKLVEVIETELNAIGAYKISMPILGAKEMWQK 171

Query: 308 SGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL-PVRLAEFG 366
           +G W ++ + MF +       K  + F L+P +      +     +  + + P+ L + G
Sbjct: 172 AGRWSTFESEMFHLND-----KTNQVFCLQPTHEEMVTKLVAEQGELRKAIYPLMLYQMG 226

Query: 367 SVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY--KDFGFEKIM 424
             +R+E     HG +R R F  +D + F   E+  ++   + + +         G     
Sbjct: 227 PKFRDETV-VGHGFLRSREFLMNDLYSFDITEENASDTYSLVSEVYQRIFRDRLGINFYT 285

Query: 425 VKLSTRPEKRVGSDALW---DDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
           V+  T       S         + + +          + D + +G             + 
Sbjct: 286 VRADTGNIGGEMSHEYHLPCRTSHDSIAYCAKCSLGVNHDLLKSGEKPC-------CCDE 338

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE 540
                I       T Q+      +F          K    ++    FG  I R I  +I+
Sbjct: 339 EYTSIIKTIEIAHTFQLGDLFTKKF--------GAKHRGQLLIMNCFGIGIGRLIAALID 390

Query: 541 NF-----KGNLPLWLSPIQAIVTTITSSAVE---YAQEIANLLKS---HHLSIETDFR-N 588
           +         LP  L+P +  V     +  E   +AQ+I  LL         I  D R +
Sbjct: 391 SMSPSARALRLPYPLTPFKVAVILPNKTQPETMAFAQDIIGLLSKIPSLQDDIFVDDRLD 450

Query: 589 ETINYKIREHSIKKIPIIIICGDK 612
            +I  ++R  +   +P I++ G++
Sbjct: 451 NSIGRRLRVAANLGVPHILVVGNR 474


>gi|227830722|ref|YP_002832502.1| threonyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
 gi|229579616|ref|YP_002838015.1| Threonyl-tRNA synthetase editing domain protein [Sulfolobus
           islandicus Y.G.57.14]
 gi|229581718|ref|YP_002840117.1| Threonyl-tRNA synthetase editing domain protein [Sulfolobus
           islandicus Y.N.15.51]
 gi|284998235|ref|YP_003420003.1| Anticodon-binding domain protein [Sulfolobus islandicus L.D.8.5]
 gi|227457170|gb|ACP35857.1| Threonyl-tRNA synthetase editing domain protein [Sulfolobus
           islandicus L.S.2.15]
 gi|228010331|gb|ACP46093.1| Threonyl-tRNA synthetase editing domain protein [Sulfolobus
           islandicus Y.G.57.14]
 gi|228012434|gb|ACP48195.1| Threonyl-tRNA synthetase editing domain protein [Sulfolobus
           islandicus Y.N.15.51]
 gi|284446131|gb|ADB87633.1| Anticodon-binding domain protein [Sulfolobus islandicus L.D.8.5]
          Length = 386

 Score =  112 bits (281), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 21/101 (20%), Positives = 52/101 (51%)

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
             LP WL+PIQ  +  +    ++++ ++A  L+   + +  D  ++++  KIR    + I
Sbjct: 267 PTLPDWLNPIQVRLLPVKKDFLDFSIQVAERLRKEGIRVNIDDLDDSLGNKIRRAGTEWI 326

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P +II G++E    ++ ++   +   + +S+ + +  +  E
Sbjct: 327 PFVIIIGEREVKTSTLTVKIRANNEQKSMSVEELVKEIKDE 367


>gi|187924092|ref|YP_001895734.1| Proline--tRNA ligase [Burkholderia phytofirmans PsJN]
 gi|187715286|gb|ACD16510.1| Proline--tRNA ligase [Burkholderia phytofirmans PsJN]
          Length = 380

 Score =  112 bits (281), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 64/396 (16%), Positives = 128/396 (32%), Gaps = 59/396 (14%)

Query: 256 FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSY 314
             + +D +G+  W   G +  + + S +R +++   + EI    + D  LW+Q+G  D+Y
Sbjct: 30  CLVHQDAAGLYSWMSLGLRAQRRVESVVREEMERAGFCEIQMSLLQDADLWRQTGRLDAY 89

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
              +  +     T +  R F L          +      +  ++ + L +FG+ YR+E  
Sbjct: 90  GDELMRL-----TSRSGRLFCLGATCEELATQMVRTHY-NRTDMSLGLYQFGNKYRDELR 143

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKDFGFEKIMVKLSTRPEK 433
            +  GL R + F   D + F   E       +      + I++  G              
Sbjct: 144 -TRGGLARAKEFIMKDGYSFNATEDGARAAYEAVREAYLRIFRRLG-------------- 188

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
                             LD I  SS +    G    E        E+ +   +G D   
Sbjct: 189 ------------------LDAIVKSSDNG-EIGGQSSE--------EFHVVSELGEDETD 221

Query: 494 GTIQVDFNLPSRFNAFYVNSHS-EKCHPVMIHRAVFGS-IERFIGIMIENFKGNLPLWLS 551
           G   ++          Y  +          +    FG  I R   +++   +     W S
Sbjct: 222 GQTSLECAHIFDLGDRYSKAMGLVNAKGKFVRMGCFGVGISRLAMLLLSRQRDERGFWGS 281

Query: 552 P----IQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
                   ++T I        E A+ +   L++  LS+  D R      K+ +  +    
Sbjct: 282 ESFNTFDVVLTVIDWERQERQEAAETLRRELQAAGLSVLMDDRLAQAGKKLADAELIACR 341

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
             ++   K  +          +   +  S  + + +
Sbjct: 342 QRVVVSGKALASGRFEWMDRRTFARRDASAAEIVTL 377


>gi|229585254|ref|YP_002843756.1| Threonyl-tRNA synthetase editing domain protein [Sulfolobus
           islandicus M.16.27]
 gi|238620213|ref|YP_002915039.1| Threonyl-tRNA synthetase editing domain protein [Sulfolobus
           islandicus M.16.4]
 gi|228020304|gb|ACP55711.1| Threonyl-tRNA synthetase editing domain protein [Sulfolobus
           islandicus M.16.27]
 gi|238381283|gb|ACR42371.1| Threonyl-tRNA synthetase editing domain protein [Sulfolobus
           islandicus M.16.4]
          Length = 386

 Score =  112 bits (281), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 21/101 (20%), Positives = 52/101 (51%)

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
             LP WL+PIQ  +  +    ++++ ++A  L+   + +  D  ++++  KIR    + I
Sbjct: 267 PTLPDWLNPIQVRLLPVKKDFLDFSIQVAERLRKEGIRVNIDDLDDSLGNKIRRAGTEWI 326

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P +II G++E    ++ ++   +   + +S+ + +  +  E
Sbjct: 327 PFVIIIGEREVKTSTLTVKIRANNEQKSMSVEELVKEIKDE 367


>gi|15897317|ref|NP_341922.1| threonyl-tRNA synthetase [Sulfolobus solfataricus P2]
 gi|284173344|ref|ZP_06387313.1| threonyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
 gi|13813530|gb|AAK40712.1| Threonyl-tRNA synthetase homolog (thrS-like) [Sulfolobus
           solfataricus P2]
 gi|261601991|gb|ACX91594.1| Threonyl-tRNA synthetase editing domain protein [Sulfolobus
           solfataricus 98/2]
          Length = 386

 Score =  112 bits (281), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 19/101 (18%), Positives = 50/101 (49%)

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
             LP WL+PIQ  +  +    ++++ ++A  L+   + +  D  ++++  KIR      I
Sbjct: 267 PTLPDWLNPIQVRLLPVKKDFLDFSIQVAERLRKEGIRVNIDDLDDSLGNKIRRAGTDWI 326

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P +I+ G++E    ++ ++       + +++ + +  +  E
Sbjct: 327 PFVIVIGEREVKTNTLTVKIRARNEQKSMTVEELVKEIKDE 367


>gi|227827985|ref|YP_002829765.1| threonyl-tRNA synthetase editing domain protein [Sulfolobus
           islandicus M.14.25]
 gi|227459781|gb|ACP38467.1| Threonyl-tRNA synthetase editing domain protein [Sulfolobus
           islandicus M.14.25]
          Length = 386

 Score =  112 bits (281), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 21/101 (20%), Positives = 52/101 (51%)

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
             LP WL+PIQ  +  +    ++++ ++A  L+   + +  D  ++++  KIR    + I
Sbjct: 267 PTLPDWLNPIQVRLLPVKKDFLDFSIQVAERLRKEGIRVNIDDLDDSLGNKIRRAGTEWI 326

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P +II G++E    ++ ++   +   + +S+ + +  +  E
Sbjct: 327 PFVIIIGEREVKTSTLTVKIRANNEQKSMSVEELVKEIKDE 367


>gi|182419083|ref|ZP_02950337.1| fision threonyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237669277|ref|ZP_04529259.1| putative threonyl-tRNA synthetase/uridine kinase [Clostridium
           butyricum E4 str. BoNT E BL5262]
 gi|182377038|gb|EDT74608.1| fision threonyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237655164|gb|EEP52722.1| putative threonyl-tRNA synthetase/uridine kinase [Clostridium
           butyricum E4 str. BoNT E BL5262]
          Length = 551

 Score =  112 bits (281), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 46/201 (22%), Positives = 86/201 (42%), Gaps = 2/201 (0%)

Query: 19  VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPEDPRSLAVIRHSC 77
              T  ++       + K      +NG+  +L++ + E G I +I  +    + +   + 
Sbjct: 17  KGMTFYNLIAENDEKIVKDIAICKLNGRNYELNEIIEEEGDISLIGFDSELGMKIYTRTL 76

Query: 78  AHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFL 137
             I  +A   ++ + ++ +   I    Y +  KE P + +EL  I+ +MQEII +D P  
Sbjct: 77  QFIFIKATLDLFKDAKITLEHSISKAIYGEIYKENPLTENELKNIKSRMQEIIDKDIPIK 136

Query: 138 KQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
           +  +S EKA E+F +     KV++L++   KE   L      +D        STG +K F
Sbjct: 137 RIKVSKEKAIEIFSNYNMEDKVKLLQTCKMKE-FQLCELDGRYDYFYECMGYSTGVIKLF 195

Query: 198 FKLMKVAGAYWRGDSNRPMLS 218
                 +G   R       ++
Sbjct: 196 DLQKYESGFILRRPERNNFVT 216


>gi|325109306|ref|YP_004270374.1| prolyl-tRNA synthetase [Planctomyces brasiliensis DSM 5305]
 gi|324969574|gb|ADY60352.1| Prolyl-tRNA synthetase [Planctomyces brasiliensis DSM 5305]
          Length = 578

 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 44/241 (18%), Positives = 96/241 (39%), Gaps = 8/241 (3%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            TQ  +        ++E   H+ + R   +  +    +G   +   GW+  Q   + +R 
Sbjct: 3   WTQSLIPTMKETPADAEVPSHQLMLRAGLIRQL---MAGAYTYLPLGWRSVQKAAAIIRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           +++     E++ P +    L++++G  +++ + +          K     AL P +    
Sbjct: 60  EMERAGACELHMPALQPIELFERTGRINAFGSVLMKFDVPRGDRK--VPVALGPTHEEVV 117

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
             + +  + SYR+LP+ + +  + +RNE       L R   F   DA+ F +  EQ+   
Sbjct: 118 TDLISRHISSYRQLPLTVYQIQTKFRNEERPRFGVL-RTSEFLMKDAYSFASSLEQLNTT 176

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              +++    ++K  G E I V+  + P     S      A+N    ++   K+     +
Sbjct: 177 YDAMYDAYCRVFKRCGLEFIPVEAESGPIGGDASHEFMIPADNGEDQIVYCKKSGYAANL 236

Query: 464 N 464
            
Sbjct: 237 E 237



 Score = 89.1 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 33/162 (20%), Positives = 64/162 (39%), Gaps = 15/162 (9%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPI 553
           +        +A Y++ H EK HP+++     G + R +  + E    +     P+ ++P 
Sbjct: 417 LGTKYSESLSAMYLDEH-EKRHPIIMGCYGIG-VNRIVAGLAETRHDDKGLLWPISIAPY 474

Query: 554 QAIVTTITSSAVEY---AQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           + ++  + +   E    A  I   LK   + +  D R+     K  +  +  IP  I+ G
Sbjct: 475 EVLIIPLKTDDEELMSAANSIYAELKEQGVDVLMDDRSARPGVKFNDADLIGIPYRIVIG 534

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILT------KESL 646
            K   E    ++       +KV L   +  +T      KE+L
Sbjct: 535 GKGLKEGVAEVKARTDADAEKVPLDQVVANVTSLVSAAKEAL 576


>gi|332299305|ref|YP_004441226.1| phosphoribulose/uridine kinase [Porphyromonas asaccharolytica DSM
           20707]
 gi|332176368|gb|AEE12058.1| phosphoribulose/uridine kinase [Porphyromonas asaccharolytica DSM
           20707]
          Length = 556

 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 43/192 (22%), Positives = 89/192 (46%), Gaps = 3/192 (1%)

Query: 16  NFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPEDPRSLAVIR 74
           + P  AT   VA+S   +L  + V   +N     L   +RE   +E +   +        
Sbjct: 16  SVPPGATLYQVAQSYRNALGFEPVNARVNNLTVALDWRLRESCQVEFVGLTEESGRHTYL 75

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQIEKKMQEIIARD 133
            S   + A+A+    P   +++   +  G++      ++  + ++LA I++++  +IA D
Sbjct: 76  RSLCLLFAKALHDELPHYHLSVRHSLSGGYFSVVRCGDKGITDEQLALIKRRIDHLIAED 135

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQ 193
            PF ++ +  E+A ++F +  E  KV+++ S   +  VT +    + D   G  + STGQ
Sbjct: 136 LPFERRTVPAEEAVQIFTAMGEMDKVDLITS-SGQPYVTYHYLDGYPDNYYGSLLLSTGQ 194

Query: 194 VKKFFKLMKVAG 205
           V+ +  +  + G
Sbjct: 195 VQLYDLVPYLGG 206


>gi|313887267|ref|ZP_07820958.1| phosphoribulokinase/uridine kinase family protein [Porphyromonas
           asaccharolytica PR426713P-I]
 gi|312923186|gb|EFR34004.1| phosphoribulokinase/uridine kinase family protein [Porphyromonas
           asaccharolytica PR426713P-I]
          Length = 556

 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 43/192 (22%), Positives = 89/192 (46%), Gaps = 3/192 (1%)

Query: 16  NFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPEDPRSLAVIR 74
           + P  AT   VA+S   +L  + V   +N     L   +RE   +E +   +        
Sbjct: 16  SVPPGATLYQVAQSYRNALGFEPVNARVNNLTVALDWRLRESCQVEFVGLTEESGRHTYL 75

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFD-KEQPFSSDELAQIEKKMQEIIARD 133
            S   + A+A+    P   +++   +  G++      ++  + ++LA I++++  +IA D
Sbjct: 76  RSLCLLFAKALHDELPHYHLSVRHSLSGGYFSVVRCGDKGITDEQLALIKRRIDHLIAED 135

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQ 193
            PF ++ +  E+A ++F +  E  KV+++ S   +  VT +    + D   G  + STGQ
Sbjct: 136 LPFERRTVPAEEAVQIFTAMGEMDKVDLITS-SGQPYVTYHYLDGYPDNYYGSLLLSTGQ 194

Query: 194 VKKFFKLMKVAG 205
           V+ +  +  + G
Sbjct: 195 VQLYDLVPYLGG 206


>gi|187933922|ref|YP_001887296.1| uridine kinase [Clostridium botulinum B str. Eklund 17B]
 gi|187722075|gb|ACD23296.1| putative threonyl-tRNA synthetase/uridine kinase [Clostridium
           botulinum B str. Eklund 17B]
          Length = 548

 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 48/182 (26%), Positives = 82/182 (45%), Gaps = 2/182 (1%)

Query: 36  KKAVAVAINGKVCDLSDPVRE-GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           K      +NGK  +L D V E G IE IT      L +   +   I  +A   ++P  ++
Sbjct: 31  KNIALCKLNGKYNELRDIVNESGKIETITFNTEMGLNIYTRTLQFIFIKATLDLFPNSKI 90

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            I   I  G + +  KE+P S +++  I++KM+EII++D P     +S  +A  +F+   
Sbjct: 91  KIEHSISKGLFGEIIKEKPLSEEDIKLIKEKMKEIISKDVPINSIRISKNEAINIFKKYG 150

Query: 155 EAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNR 214
              K+ +L+     + V LY     +D   G    STG ++ F  +   +G   R     
Sbjct: 151 MEDKISLLQYSNLNQ-VKLYELEGRYDYFYGHMAYSTGVIRAFDLIYYESGFILRSPEKE 209

Query: 215 PM 216
            +
Sbjct: 210 NL 211


>gi|62184882|ref|YP_219667.1| prolyl-tRNA synthetase [Chlamydophila abortus S26/3]
 gi|81312944|sp|Q5L6M5|SYP_CHLAB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|62147949|emb|CAH63696.1| prolyl-tRNA synthetase [Chlamydophila abortus S26/3]
          Length = 577

 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 40/218 (18%), Positives = 92/218 (42%), Gaps = 9/218 (4%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q          +E+    +  L +   +F  A+   G+  +    W++   ++  +R 
Sbjct: 3   TSQLFYKTSKNANKEASVLSYELLEKAGYIFKTAK---GIYTYTPLFWRVALKMMDIIRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +E+  P +    LWQ++G W+++R+        D   ++ + F L P +    
Sbjct: 60  ELNAIGGQELVLPILHPAELWQKTGRWEAFRSEGLLYTVKD---REDKEFCLAPTHEEIV 116

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNE 403
               +  L   ++LP+ L +  + +R+E      GLMR + F  +D++ F  + EQM  +
Sbjct: 117 SMFVSQWLSGRKQLPIHLYQIATKFRDEIRPRF-GLMRAKEFLMEDSYTFSDSPEQMNEQ 175

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALW 441
             K+     +I+     + ++V+       +  S+   
Sbjct: 176 YAKLRQAYQNIFDRLEIQYVIVEADGGKIGKGKSEEFH 213



 Score = 64.8 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 33/149 (22%), Positives = 60/149 (40%), Gaps = 13/149 (8%)

Query: 500 FNLPSRF-NAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN----LPLWLSPI 553
           FNL +R+   F V    E+  P       +G  I R +   IE    +     P  ++P 
Sbjct: 415 FNLGTRYTEGFDVVFQDEQGKPQSCWMGTYGIGIGRTLAACIEQLADDRGIVWPKAIAPF 474

Query: 554 QAIVTTITSS--AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
              +          E A++I   L+ +  +   D RNE + +K+++  +  IP  +I G 
Sbjct: 475 DISILYNGGDTACEEAAEKIYKELQGYGYAPLLDDRNERLGFKLKDSDLIGIPYKLILGK 534

Query: 612 KEASERSIGIRRFGSTTTQKVSLL--DAI 638
              +   + I    S + +K S+   D +
Sbjct: 535 TFLNSGMLEI---ESRSIEKFSVEPKDFV 560


>gi|170287982|ref|YP_001738220.1| phosphoribulokinase/uridine kinase [Thermotoga sp. RQ2]
 gi|170175485|gb|ACB08537.1| phosphoribulokinase/uridine kinase [Thermotoga sp. RQ2]
          Length = 555

 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 48/224 (21%), Positives = 88/224 (39%), Gaps = 9/224 (4%)

Query: 6   KLTFP---DGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDL-SDPVREGSIEI 61
           K+T     DG       +    D+A    +    K +A  +N ++ +L   P R G +E 
Sbjct: 3   KITLRSKLDGREIVLEENQNLFDIAREYQKYYRYKILAARVNNRIIELFRTPDRSGELEF 62

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQ---PFSSDE 118
           +   DP  L + +     + + AV+ +  E ++ +   +  G Y +  K         ++
Sbjct: 63  LDLTDPDGLRIYQRGLVFLASLAVRKLNSEWRLKVLHSLGKGIYCEIYKGNELIVPDQNQ 122

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           +  I+ KM+E++ +D P  K+    ++ARE+   +    K   L     K  V LY    
Sbjct: 123 VFAIKDKMRELVEKDLPIEKRTFYKDEAREILMKEG-LVKTVNLFKYRKKRTVKLYHCDG 181

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYW-RGDSNRPMLSRIY 221
           ++    G    STG++  F       G      D     L  I+
Sbjct: 182 FWAYFYGYLPPSTGRIDVFDVQPYNQGLVLVHPDPKTRELPVIH 225


>gi|291299271|ref|YP_003510549.1| prolyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728]
 gi|290568491|gb|ADD41456.1| prolyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728]
          Length = 562

 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 41/199 (20%), Positives = 78/199 (39%), Gaps = 12/199 (6%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +         F  E+E   H++L R   +  +A     +        ++   +++ +R 
Sbjct: 3   WSTLYAPTLRDFPAEAEAPSHQRLVRAGFIRQLAAGHYSL---LPLAIRVRAKIMAVIRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +E   P +    +W  SG WD   + MF +K      +     AL   +    
Sbjct: 60  ELDRIGAQEFLLPAMHPAEIWHASGRWDVMGSEMFRLKD-----RKGAQLALGMTHEEIF 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
            ++    L SY++LP    +F + +R+EP     GL+RVR FT  D++ F       +  
Sbjct: 115 TSI-ATELNSYKQLPQIWYQFQTKFRDEPRPK-GGLLRVREFTMKDSYSFDLDAAGLDAA 172

Query: 405 LKIHN-LIISIYKDFGFEK 422
              H    + I++  G   
Sbjct: 173 FDKHRGAYLRIFERLGIPA 191



 Score = 81.4 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 61/163 (37%), Gaps = 12/163 (7%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG--- 544
           R  + G I  +        +A  ++++  K  PV++     G +ER I  ++E       
Sbjct: 400 RTIEVGHIFKLGTKYSEVLDAKVLDANG-KAVPVVMGSYGIG-VERAIAAIVEAHHDEAG 457

Query: 545 -NLPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              P+ ++P    V  ++       + A+ +   L      +  D R+     K+ +  +
Sbjct: 458 IKWPVNVAPYTVAVVMMSTKDDEVRQAAENLYRQLSD--TDVILDDRDARPGAKLTDVEL 515

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             IP  +  G +     S+ I    +  T+ V + +A   +  
Sbjct: 516 VGIPFRVTVGARGLKTGSVEITSRATGETETVPVAEAAARVRD 558


>gi|309389074|gb|ADO76954.1| AAA ATPase [Halanaerobium praevalens DSM 2228]
          Length = 549

 Score =  112 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 46/203 (22%), Positives = 99/203 (48%), Gaps = 3/203 (1%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIIT 63
           +KL   DG+      +    D+      S   + +AV I+ KVC+L++ + ++  ++ I 
Sbjct: 1   MKLNL-DGNQIEVVQNKKIKDILNENQISKLDEVMAVFIDNKVCNLNEKITKKAKLKPIR 59

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
                   + R S   ++A+AV  ++PEV + I   I +G Y + + +   +  E+ +++
Sbjct: 60  INSELGNRIYRSSLYLVLAKAVYELFPEVILKIEISISNGVYCELENKDSLTKSEIFKLK 119

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M+EII  D    K  L  E+  ++ + +  +++ E+++    + + TLY    ++D  
Sbjct: 120 DRMKEIINSDYKIKKHKLKKEEVLKIIQDENCSFRSELIKK-QDQAHYTLYEIDGYYDYF 178

Query: 184 RGPHVRSTGQVKKFFKLMKVAGA 206
               V ST  +K+F   +++ G 
Sbjct: 179 YYNMVPSTSYLKEFDLHLRIPGF 201


>gi|148378199|ref|YP_001252740.1| putative threonyl-tRNA synthetase/uridine kinase [Clostridium
           botulinum A str. ATCC 3502]
 gi|148287683|emb|CAL81748.1| putative kinase [Clostridium botulinum A str. ATCC 3502]
          Length = 552

 Score =  112 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 57/237 (24%), Positives = 95/237 (40%), Gaps = 2/237 (0%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           +KL  P+GS        T  DV +          V   I+ +  +L+  V+ EG    + 
Sbjct: 4   LKLYMPNGSNILVSGDKTLYDVVKENKLQDNIPIVLGKIDEEYYELTSTVKKEGVFIPVD 63

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
             D   L     +   I  +AV  ++PE  V I   +  G Y +  K    + +++ +I+
Sbjct: 64  ITDSMGLKTYVRTLQFIFIKAVLDLYPESTVVIEHSLGKGLYGEIHKTLSLNENDILKIK 123

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M EII +D    K  +  E+A E+F   K   KV +L  IP +E V LY     +D  
Sbjct: 124 NRMNEIINKDIKIKKITVKKERAIEIFNEYKMKDKVRLLNHIPHEE-VKLYELDGRYDYF 182

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
            GP   STG +K F  +    G   R    +   +      +    ++ +      +
Sbjct: 183 YGPMAYSTGAIKNFDIMYYDPGFILRYPREKDPFNIPEFVEYKKLTKIFRETEKWAK 239


>gi|168177529|ref|ZP_02612193.1| putative threonyl-tRNA synthetase/uridine kinase [Clostridium
           botulinum NCTC 2916]
 gi|182670689|gb|EDT82663.1| putative threonyl-tRNA synthetase/uridine kinase [Clostridium
           botulinum NCTC 2916]
          Length = 552

 Score =  112 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 57/237 (24%), Positives = 95/237 (40%), Gaps = 2/237 (0%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           +KL  P+GS        T  DV +          V   I+ +  +L+  V+ EG    + 
Sbjct: 4   LKLYMPNGSNILVSGDKTLYDVVKENKLQDNIPIVLGKIDEEYYELTSTVKKEGVFIPVD 63

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
             D   L     +   I  +AV  ++PE  V I   +  G Y +  K    + +++ +I+
Sbjct: 64  ITDSMGLKTYVRTLQFIFIKAVLDLYPESTVVIEHSLGKGLYGEIHKTLSLNENDILKIK 123

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M EII +D    K  +  E+A E+F   K   KV +L  IP +E V LY     +D  
Sbjct: 124 NRMNEIINKDIKIKKISVKKERAIEIFNEYKMKDKVRLLNHIPHEE-VKLYELDGRYDYF 182

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
            GP   STG +K F  +    G   R    +   +      +    ++ +      +
Sbjct: 183 YGPMAYSTGAIKNFDIMYYDPGFILRYPREKDPFNIPEFVEYKKLTKIFRETEKWAK 239


>gi|226947417|ref|YP_002802508.1| putative threonyl-tRNA synthetase/uridine kinase [Clostridium
           botulinum A2 str. Kyoto]
 gi|226842311|gb|ACO84977.1| putative threonyl-tRNA synthetase/uridine kinase [Clostridium
           botulinum A2 str. Kyoto]
          Length = 552

 Score =  112 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 57/237 (24%), Positives = 95/237 (40%), Gaps = 2/237 (0%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           +KL  P+GS        T  DV +          V   I+ +  +L+  V+ EG    + 
Sbjct: 4   LKLYMPNGSNILVSGDKTLYDVVKENKLQDNIPIVLGKIDEEYYELTSTVKKEGVFIPVD 63

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
             D   L     +   I  +AV  ++PE  V I   +  G Y +  K    + +++ +I+
Sbjct: 64  ITDSMGLKTYVRTLQFIFIKAVLDLYPESTVVIEHSLGKGLYGEIHKTLSLNENDILKIK 123

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M EII +D    K  +  E+A E+F   K   KV +L  IP +E V LY     +D  
Sbjct: 124 NRMNEIINKDIKIKKISVKKERAIEIFNEYKMKDKVRLLNHIPHEE-VKLYELDGRYDYF 182

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
            GP   STG +K F  +    G   R    +   +      +    ++ +      +
Sbjct: 183 YGPMAYSTGAIKNFDIMYYDPGFILRYPREKDPFNIPEFVEYKKLTKIFRETEKWAK 239


>gi|283797723|ref|ZP_06346876.1| phosphoribulokinase family protein [Clostridium sp. M62/1]
 gi|291074619|gb|EFE11983.1| phosphoribulokinase family protein [Clostridium sp. M62/1]
          Length = 551

 Score =  111 bits (278), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 43/199 (21%), Positives = 80/199 (40%), Gaps = 5/199 (2%)

Query: 12  GSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSL 70
           G  + +P     S +A      ++   + V  NG++ +LS  ++ +  I +IT  D    
Sbjct: 8   GERREYPEGMPYSAIAADFREKVSHDILLVRANGRLRELSKKLKGDCEISLITAADREGW 67

Query: 71  AVIRHSCAHIMAEAVQSIWPEVQV---AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQ 127
              + S   +M +A        +V    +   +  G Y + + E    S  L  ++ +M 
Sbjct: 68  QTYQRSAVFLMLKAFYDTVGGDKVKKITVCFSVGQGLYVEPEGEFDLDSSLLKNVKARMG 127

Query: 128 EIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPH 187
           E+ +   P +KQ ++  +A E F   +   K E L        V +Y  G + D   G  
Sbjct: 128 ELQSMCLPIIKQSVNTSEAVEQFHRHRMYDK-EKLFRFRRASRVNVYSIGNFQDYFYGYM 186

Query: 188 VRSTGQVKKFFKLMKVAGA 206
           V  TG +K +   +  +G 
Sbjct: 187 VEHTGFIKYYDLALYESGF 205


>gi|153941164|ref|YP_001389559.1| putative threonyl-tRNA synthetase/uridine kinase [Clostridium
           botulinum F str. Langeland]
 gi|152937060|gb|ABS42558.1| putative threonyl-tRNA synthetase/uridine kinase [Clostridium
           botulinum F str. Langeland]
 gi|295317656|gb|ADF98033.1| putative threonyl-tRNA synthetase/uridine kinase [Clostridium
           botulinum F str. 230613]
          Length = 552

 Score =  111 bits (278), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 57/237 (24%), Positives = 95/237 (40%), Gaps = 2/237 (0%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           +KL  P+GS        T  DV +          V   I+ +  +L+  V+ EG    + 
Sbjct: 4   LKLYMPNGSNILVSGDKTLYDVVKENKLQDNIPIVLGKIDEEYYELTSTVKKEGVFIPVD 63

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
             D   L     +   I  +AV  ++PE  V I   +  G Y +  K    + +++ +I+
Sbjct: 64  ITDSMGLKTYVRTLQFIFIKAVLDLYPESTVVIEHSLGKGLYGEIHKTLSLNENDILKIK 123

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M EII +D    K  +  E+A E+F   K   KV +L  IP +E V LY     +D  
Sbjct: 124 NRMNEIINKDIKIKKISVKKERAIEIFNEYKMKDKVRLLNHIPHEE-VKLYELDGRYDYF 182

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
            GP   STG +K F  +    G   R    +   +      +    ++ +      +
Sbjct: 183 YGPMAYSTGAIKNFDIMYYDPGLILRYPREKDPFNIPEFVEYKKLTKIFRETEKWAK 239


>gi|187777216|ref|ZP_02993689.1| hypothetical protein CLOSPO_00762 [Clostridium sporogenes ATCC
           15579]
 gi|187774144|gb|EDU37946.1| hypothetical protein CLOSPO_00762 [Clostridium sporogenes ATCC
           15579]
          Length = 555

 Score =  111 bits (278), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 56/239 (23%), Positives = 96/239 (40%), Gaps = 2/239 (0%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
            ++KL  P+GS           DV +          V   I+ +  +L+  V+ EG    
Sbjct: 5   EELKLYMPNGSNILVSGDKILYDVVKENKLESNIPIVLGKIDEEYYELTSKVKKEGVFTP 64

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +   D   +     +   I  +AV  ++PE  V I   +  G Y +  K    + +++ +
Sbjct: 65  VDITDEMGVKTYVRTLQFIFIKAVLDLYPEATVIIEHSLGKGLYGEIHKNISLNENDILK 124

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           I+ KM EII++D    K  +  EKA E+F+      KV +L  IP +E V LY     +D
Sbjct: 125 IKNKMNEIISKDIKIKKVSVKKEKAIEIFKEYGMKDKVRLLSHIPHEE-VKLYELDGRYD 183

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
              GP   STG +K F  +    G   R    +   +      +    ++ +      +
Sbjct: 184 YFYGPMAYSTGAIKNFDIMYYDPGFILRYPREKDPFNIPEFVEYKKLTKIFRETEKWAK 242


>gi|331090838|ref|ZP_08339684.1| hypothetical protein HMPREF9477_00327 [Lachnospiraceae bacterium
           2_1_46FAA]
 gi|330399697|gb|EGG79359.1| hypothetical protein HMPREF9477_00327 [Lachnospiraceae bacterium
           2_1_46FAA]
          Length = 555

 Score =  111 bits (278), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 44/199 (22%), Positives = 77/199 (38%), Gaps = 5/199 (2%)

Query: 12  GSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSL 70
             IK +    T   +AE          V V ++GK+ +L    + +  +E IT +     
Sbjct: 12  NEIKLYEEGTTYKKIAEDYQGEYENDIVLVLVDGKLQELPKQCKHDCKLEFITTDTKIGN 71

Query: 71  AVIRHSCAHIMAEAVQSIWPEVQVA---IGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQ 127
              R S   +M +A++ +  +  V    +   +  G+Y   D +   +   L Q+EK+M+
Sbjct: 72  ETYRRSMCLLMVKAIEDVTGKENVKKIRVQYSVSKGYYCTADGDFEITDTFLRQVEKRME 131

Query: 128 EIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPH 187
           E+    +P +K+ +  + A  LF+ +    K E L        V LY      D   G  
Sbjct: 132 EMAEEKTPIVKKTVHIDDAMSLFKEQGMYDK-ERLFRYRRVSAVNLYEMENMADYYYGYM 190

Query: 188 VRSTGQVKKFFKLMKVAGA 206
           V     +K F       G 
Sbjct: 191 VPDASYLKYFALYRYDDGF 209


>gi|251780827|ref|ZP_04823747.1| putative threonyl-tRNA synthetase/uridine kinase [Clostridium
           botulinum E1 str. 'BoNT E Beluga']
 gi|243085142|gb|EES51032.1| putative threonyl-tRNA synthetase/uridine kinase [Clostridium
           botulinum E1 str. 'BoNT E Beluga']
          Length = 548

 Score =  111 bits (278), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 47/182 (25%), Positives = 80/182 (43%), Gaps = 2/182 (1%)

Query: 36  KKAVAVAINGKVCDLSDPVRE-GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           K      +NGK  +L D + E G IE I       L +   +   I  +A   ++P  ++
Sbjct: 31  KNIALCKLNGKYHELRDIISESGEIETINFNTEMGLNIYTRTLQFIFIKATLDLFPNSKI 90

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            I   I  G + +  KE+P +  ++  I++KM+EII ++       +S ++A  +F+   
Sbjct: 91  KIEHSISKGLFGEVIKEEPLNEKDIKLIKEKMKEIIIKNVLINSIRISKDEAISIFDQYG 150

Query: 155 EAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNR 214
              KV +LE+    E V LY     +D   G    STG +K F  +   +G   R     
Sbjct: 151 MEDKVLLLENSNLNE-VKLYELEGRYDYFYGQMAYSTGIIKAFDLIYYESGFILRSPEKE 209

Query: 215 PM 216
            +
Sbjct: 210 NL 211


>gi|170755409|ref|YP_001779823.1| putative threonyl-tRNA synthetase/uridine kinase [Clostridium
           botulinum B1 str. Okra]
 gi|169120621|gb|ACA44457.1| putative threonyl-tRNA synthetase/uridine kinase [Clostridium
           botulinum B1 str. Okra]
          Length = 552

 Score =  111 bits (278), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 57/237 (24%), Positives = 95/237 (40%), Gaps = 2/237 (0%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           +KL  P+GS        T  DV +          V   I+ +  +L+  V+ EG    + 
Sbjct: 4   LKLYMPNGSNILVSGDKTLYDVVKENKLQDNIPIVLGKIDEEYYELTSTVKKEGVFIPVD 63

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
             D   L     +   I  +AV  ++PE  V I   +  G Y +  K    + +++ +I+
Sbjct: 64  ITDSMGLKTYVRTLQFIFIKAVLDLYPESTVVIEHSLGKGLYGEIHKTLSLNENDILKIK 123

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M EII +D    K  +  E+A E+F   K   KV +L  IP +E V LY     +D  
Sbjct: 124 NRMNEIINKDIKIKKISVKKERAIEIFNEYKMKDKVRLLNHIPHEE-VKLYELDGRYDYF 182

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
            GP   STG +K F  +    G   R    +   +      +    ++ +      +
Sbjct: 183 YGPMAYSTGAIKNFDIMYYDPGLILRYPREKDPFNIPEFVEYKKLTKIFRETEKWAK 239


>gi|295092053|emb|CBK78160.1| Uridine kinase [Clostridium cf. saccharolyticum K10]
          Length = 551

 Score =  111 bits (278), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 43/199 (21%), Positives = 80/199 (40%), Gaps = 5/199 (2%)

Query: 12  GSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSL 70
           G  + +P     S +A      ++   + V  NG++ +LS  ++ +  I +IT  D    
Sbjct: 8   GERREYPEGMPYSAIAADFREKVSHDILLVRANGRLRELSKKLKGDCEISLITAADREGW 67

Query: 71  AVIRHSCAHIMAEAVQSIWPEVQV---AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQ 127
              + S   +M +A        +V    +   +  G Y + + E    S  L  ++ +M 
Sbjct: 68  QTYQRSAVFLMLKAFYDTVGGDKVKKITVCFSVGQGLYVEPEGEFDLDSSLLKNVKARMG 127

Query: 128 EIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPH 187
           E+ +   P +KQ ++  +A E F   +   K E L        V +Y  G + D   G  
Sbjct: 128 ELQSMCLPIIKQSVNTSEAVEQFHRHRMYDK-EKLFRFRRASRVNVYSIGNFQDYFYGYM 186

Query: 188 VRSTGQVKKFFKLMKVAGA 206
           V  TG +K +   +  +G 
Sbjct: 187 VEHTGFIKYYDLALYESGF 205


>gi|150021633|ref|YP_001306987.1| phosphoribulokinase/uridine kinase [Thermosipho melanesiensis
           BI429]
 gi|149794154|gb|ABR31602.1| phosphoribulokinase/uridine kinase [Thermosipho melanesiensis
           BI429]
          Length = 559

 Score =  111 bits (278), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 44/243 (18%), Positives = 86/243 (35%), Gaps = 7/243 (2%)

Query: 9   FPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGK-VCDLSDPV-REGSIEIITPED 66
             DG +      +T  +      +      VA  +N   + +L  P+   G +  +    
Sbjct: 9   LDDGRVVEVEKGSTLENFVGDYFKYYKSPIVAAKVNNNNIVELFRPLSYSGKVVFLDVNS 68

Query: 67  PRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF----DKEQPFSSDELAQI 122
                + +     I+   ++ I+P   + +   I    Y +     +  +  S +E+  +
Sbjct: 69  IDGFRIYQRGLLFILKYVLKKIYPNHFLKVSHSIGKSIYCELKDLNNNLKVLSDEEIENV 128

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           + KM E+I ++  FLK      +A +LF+    + KV +L     K+ V +Y+  E FD 
Sbjct: 129 KSKMFEVINKNERFLKMEFFKSEALKLFDKLGYSDKVNLL-KYRKKKTVKVYKLDEHFDY 187

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
             G    STG +K F       G        +   + +         ++        E  
Sbjct: 188 FYGYMPHSTGVLKYFDLFKYEDGFVLVLPVFKDGKAILEFKPMTKLSQVFIEYKKWLEIM 247

Query: 243 KRD 245
             D
Sbjct: 248 NID 250


>gi|298245367|ref|ZP_06969173.1| prolyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
 gi|297552848|gb|EFH86713.1| prolyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
          Length = 578

 Score =  111 bits (278), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 41/236 (17%), Positives = 84/236 (35%), Gaps = 7/236 (2%)

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEE 293
                + E  +   L R   +  +    SGV      G ++ + L   +R +++    +E
Sbjct: 12  RERAHDVESTNLDLLTRGGFVRQL---TSGVYSMLPLGERVMRKLTEIIRAEMERIGGQE 68

Query: 294 INTPQVLDQHLWQQSGHWDSY-RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           ++ P +  + +W+         RA  +         +  R   L P +      +    +
Sbjct: 69  VSMPVLQPREIWEARPQSGKASRAEGYGPVLFSLHDRRERELVLGPTHEEICTLLAQEFI 128

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LI 411
           +SYR+LP  + +    +R+EP  +  GL+R+R F   D + F   E+  N   ++     
Sbjct: 129 RSYRDLPRLVFQVQRKFRDEPR-ARGGLLRLREFLMKDLYSFDADEEGLNANFELVREAY 187

Query: 412 ISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGV 467
             I+   G + I+V+  +       S       E     +L          +    
Sbjct: 188 CRIFARCGLDFIVVEADSGAIGGKESLEFIALTEAGEDTILRCTGCGYAANVEKAE 243



 Score = 76.0 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 71/166 (42%), Gaps = 14/166 (8%)

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN--- 541
             +G  ++ GTI  D      FNA ++++   +  P+++     G I R +  ++E    
Sbjct: 415 CELGHIFKLGTIYSDL-----FNATFLDAEG-RTQPLIMASYGIG-ISRLLACIVEQQHD 467

Query: 542 -FKGNLPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
                 PL ++P    +  I          A+++   L +  + +  D R+E+   K  +
Sbjct: 468 ARGLTWPLAVAPYAVSLVGIDLVKEEIGRAAEQLYADLCAAGVEVLFDDRHESAGIKFND 527

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             +  +P+ ++   +   +  + ++   S  +Q VSL +A+  + +
Sbjct: 528 ADLLGLPLRVVVSKRSLKQGGVELKVRTSQESQIVSLSEALNEIQQ 573


>gi|295100007|emb|CBK89096.1| prolyl-tRNA synthetase, family II [Eubacterium cylindroides T2-87]
          Length = 564

 Score =  111 bits (278), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 42/214 (19%), Positives = 92/214 (42%), Gaps = 8/214 (3%)

Query: 228 QQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI 287
           +   + +    E ++  D       +    I +  +G+      G K+   + + +R ++
Sbjct: 2   KLSKSFFYTLRENAKDEDSVSSNLLVRAGMIKKSSNGMYMIMPMGKKVLAKIENIVREEM 61

Query: 288 KD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA 346
              D +E+  P ++ + ++ +SG  + + +NMF +       + ++ + L P +      
Sbjct: 62  DAKDAQELLMPALIPEEVYIKSGRREVFGSNMFTMND-----RYMKRYVLGPTHEELFAV 116

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL- 405
             +   KSY++ P  L +  + +R+E     +GL+RVR F   DA+ F   E   +E   
Sbjct: 117 AASMDGKSYKDFPYNLYQIQTKFRDETRPR-YGLIRVREFIMKDAYTFDIDEAGLDEAYA 175

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDA 439
           K+++    I+     E  +VK  T     + S+ 
Sbjct: 176 KMYDAYCRIFDRMELEYKIVKADTGAMGGLLSEE 209



 Score = 82.5 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 61/154 (39%), Gaps = 11/154 (7%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNLPLWLSPIQAI 556
           +        N +Y +++++     M    +   +ER +  ++E +      +W   +   
Sbjct: 411 LGTKYAQSMNLYYTDANNQLQPVWMGSYGI--GLERCMAAIVEQHHDDKGIIWPKEVAPF 468

Query: 557 VTTI------TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           + +I          +E A ++ N    +  S+  D RNE    K ++  +  IP  I  G
Sbjct: 469 ILSIVPISLKDEKQMEIANDLYNYCTKNKYSVLLDDRNERPGVKFKDMELIGIPYRITVG 528

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            K A E  +      +   ++VS+ D+I  +  E
Sbjct: 529 RK-AQEGILEFSNRYTGEKEEVSI-DSIKSMIDE 560


>gi|167517733|ref|XP_001743207.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163778306|gb|EDQ91921.1| predicted protein [Monosiga brevicollis MX1]
          Length = 1312

 Score =  111 bits (278), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 62/325 (19%), Positives = 117/325 (36%), Gaps = 49/325 (15%)

Query: 245  DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQH 303
             + ++  + +L     D SG        + ++Q++  +  R+I+    +    P  + Q 
Sbjct: 1029 WYSEVIIKSELIDY-YDVSGCYILRPWAYSVWQSIQEFFDREIRARGVQNSYFPIFVSQA 1087

Query: 304  LWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
              + +  H   +   +  V  + ++  +    A++P +       +   ++S+R+LP++L
Sbjct: 1088 ALEREKEHIADFAPEVAWVTRSGESELEK-PIAVRPTSETVMYPAYAKWIQSHRDLPLKL 1146

Query: 363  AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFE 421
             ++ +V R E        +R R F   + H  F TK +   E L+I  L   +Y++    
Sbjct: 1147 NQWCNVVRWEFKQPT-PFLRTREFLWQEGHTAFATKPEADEEVLEILELYRRVYEELLAV 1205

Query: 422  KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEY 481
             ++    T  EK  G D                                    Y    E 
Sbjct: 1206 PVVPGRKTEKEKFAGGD------------------------------------YTTTVEA 1229

Query: 482  ILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
             +  A GR  Q  T   +  N    F   Y N   +    + + +  +G   R IG+MI 
Sbjct: 1230 YI-GANGRAIQGATSHHLGQNFSKMFGIKYQNPD-KHDEFINVFQNSWGITTRTIGVMIM 1287

Query: 541  NFKGNLPLWLSP----IQAIVTTIT 561
                +  L L P    IQAI+    
Sbjct: 1288 VHGDDKGLVLPPRVASIQAIIIPTG 1312


>gi|153931197|ref|YP_001382600.1| putative threonyl-tRNA synthetase/uridine kinase [Clostridium
           botulinum A str. ATCC 19397]
 gi|153937058|ref|YP_001386152.1| putative threonyl-tRNA synthetase/uridine kinase [Clostridium
           botulinum A str. Hall]
 gi|152927241|gb|ABS32741.1| putative threonyl-tRNA synthetase/uridine kinase [Clostridium
           botulinum A str. ATCC 19397]
 gi|152932972|gb|ABS38471.1| putative threonyl-tRNA synthetase/uridine kinase [Clostridium
           botulinum A str. Hall]
          Length = 552

 Score =  111 bits (278), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 58/237 (24%), Positives = 96/237 (40%), Gaps = 2/237 (0%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           +KL  P+GS        T  DV +          V   I+ +  +L+  V+ EG    + 
Sbjct: 4   LKLYMPNGSNILASGDKTLYDVVKENKLQDNIPIVLGKIDEEYYELTSTVKKEGVFIPVD 63

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
             D   L     +   I  +AV  ++PE  V I   +  G Y +  K    + +++ +I+
Sbjct: 64  ITDSMGLKTYVRTLQFIFIKAVLDLYPESTVVIEHSLGKGLYGEIHKTLSLNENDILKIK 123

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M EII +D    K  +  E+A E+F   K   KV +L  IP +E V LY   E +D  
Sbjct: 124 NRMNEIINKDIKIKKISVKKERAIEIFNEYKMKDKVRLLNHIPHEE-VKLYELDERYDYF 182

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
            GP   STG +K F  +    G   R    +   +      +    ++ +      +
Sbjct: 183 YGPMAYSTGAIKNFDIMYYDPGFILRYPREKDPFNIPEFVEYKKLTKIFRETEKWAK 239


>gi|308272040|emb|CBX28648.1| Prolyl-tRNA synthetase [uncultured Desulfobacterium sp.]
          Length = 506

 Score =  111 bits (277), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 63/445 (14%), Positives = 141/445 (31%), Gaps = 72/445 (16%)

Query: 228 QQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI 287
           ++E T      +E     +++  +  D+   +     ++     G+ +++ ++  +    
Sbjct: 3   KEEKTAITPTRQEDYSEWYQQAVKVSDMAERSPVRGCMVI-KPWGYSLWENIVRELDDMF 61

Query: 288 KD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDL----------RTFA 335
           KD   +    P  +     + ++ H + +      V                        
Sbjct: 62  KDTGVKNAYFPLFIPLGFLEKEAAHVEGFAKECAVVTHHRLEKNSEGRLVPAGPLTEPLV 121

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC 395
           ++P +       F++ + SYR+LP+ + ++ +V R E        +R   F   + H   
Sbjct: 122 VRPTSETIIGDAFSNWVSSYRDLPLIINQWANVVRWEMR--TRIFLRTSEFLWQEGHTAH 179

Query: 396 TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTI 455
             E+   E  K+   I +                                   K   + +
Sbjct: 180 ASEKEAMERTKLMLDIYA-----------------------------------KLAEEYL 204

Query: 456 KNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS 515
                    T      GA      E ++ D  G   Q GT        ++  A  +   S
Sbjct: 205 AIPVIKGRKTEAEKFPGAVETFSIEAMMHDRKG--LQAGTSHFLGQNFAK--ASEIKFQS 260

Query: 516 EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI----QAIVTTIT------SSAV 565
            +          +G   R IG +I     +  + L P       ++  I          +
Sbjct: 261 FEEKEEYAWTTSWGVSTRLIGGIIMTHGDDNGVILPPRVASSHVVLIPIYRSPDDKPKVM 320

Query: 566 EYAQEIANLLKS-----HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
           EY +++   LK        + +E D R+     +  +   K IP+ +  G ++ ++ S+ 
Sbjct: 321 EYVEKLGLELKDLFYHHRKIRVEIDDRD-IGGARGWDWIKKGIPLRVEIGPRDIAKDSVF 379

Query: 621 IRRFGSTTTQKVSL--LDAIPILTK 643
           I R   +  +K+S+     +  +  
Sbjct: 380 IGRRDKSHREKISMKRDQFLKEIIN 404


>gi|90077278|dbj|BAE88319.1| unnamed protein product [Macaca fascicularis]
          Length = 185

 Score =  111 bits (277), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 2/91 (2%)

Query: 2   PSDIKLTFPDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSI 59
              IK+T PDG   +      T   +A  IS+ LA   V   +N  V DL  P+  + ++
Sbjct: 80  SKPIKVTLPDGKQVDAESWKTTPYQIACGISQGLADNTVIAKVNNVVWDLDRPLEEDCTL 139

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWP 90
           E++  ED  + AV  HS  HIM EA++ ++ 
Sbjct: 140 ELLKFEDEEAQAVYWHSSPHIMGEAMERVYG 170


>gi|306820564|ref|ZP_07454195.1| phosphoribulokinase/uridine kinase [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
 gi|304551381|gb|EFM39341.1| phosphoribulokinase/uridine kinase [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
          Length = 550

 Score =  111 bits (277), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 36/194 (18%), Positives = 76/194 (39%), Gaps = 1/194 (0%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPE 65
           + + D        + T  +  +            V IN ++ +L+  + +   I  +   
Sbjct: 2   IIYYDKKKYEVDDNITAEEFVQKNEIKTNYTTCLVLINNEIRELTRKLNDNDEISFLDLT 61

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK 125
              +      + + I   A++   P  +  I   + +G Y   D  +  +   +++I +K
Sbjct: 62  VKEARDAYMRTLSFIFISALKKTNPSAKCTIEHSLSNGIYCYIDNGRQVNRAVVSKIYEK 121

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRG 185
           M+EI+  D    K   +  +A++++  +    K+ +L+    K+ VTLY      D   G
Sbjct: 122 MKEIVKEDIKIKKLEFTKSEAKKIYIEENFDVKLGLLDYKDDKKKVTLYELCGQKDYFYG 181

Query: 186 PHVRSTGQVKKFFK 199
             + STG  K F  
Sbjct: 182 YMLPSTGYAKIFNL 195


>gi|150019323|ref|YP_001311577.1| phosphoribulokinase/uridine kinase [Clostridium beijerinckii NCIMB
           8052]
 gi|149905788|gb|ABR36621.1| phosphoribulokinase/uridine kinase [Clostridium beijerinckii NCIMB
           8052]
          Length = 551

 Score =  111 bits (277), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 50/182 (27%), Positives = 85/182 (46%), Gaps = 2/182 (1%)

Query: 36  KKAVAVAINGKVCDLSDPVRE-GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           K      +NG+ C+L++ + + G +E+I  +    + +   +   I  +    ++PE ++
Sbjct: 34  KDIAICKLNGRYCELTEVIEDDGEVELIGFDTELGMKIFTRTLQFIFIKVALDLFPESKI 93

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            I   I    Y +  KE P S  E+ +I+ KMQEII R+ P      S E+A ++FE  K
Sbjct: 94  TIDHAISKAVYGEVHKENPLSKGEIDKIKVKMQEIIDRNVPIKSMRTSKEEAIKIFEGYK 153

Query: 155 EAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNR 214
              KV++L+    K +V LY     +D   GP   STG + KF      +G   +     
Sbjct: 154 MDDKVKLLKYCDIK-HVHLYELEGRYDYFYGPMGYSTGIINKFDVFKYESGFILQRPEET 212

Query: 215 PM 216
            +
Sbjct: 213 NL 214


>gi|32491346|ref|NP_871600.1| prolyl-tRNA synthetase [Wigglesworthia glossinidia endosymbiont of
           Glossina brevipalpis]
 gi|81844435|sp|Q8D1V9|SYP_WIGBR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|25166553|dbj|BAC24743.1| proS [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 561

 Score =  111 bits (277), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 37/218 (16%), Positives = 79/218 (36%), Gaps = 11/218 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L        E+E   HR + R   +  ++   SG+  W   G+++ + + + +R 
Sbjct: 3   TSQYYLATLKDSPSETEGISHRLMIRSGMIRKLS---SGLYAWLPTGFRVLKKIENIIRH 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      EI  P +    +W+ SG ++ Y   +          +  + F L P +    
Sbjct: 60  EMNKIGAIEILMPIIQPSLIWKNSGRYEEYGLELLKFYD-----RKKKQFVLAPTHEEVI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +    +   +  P+   +  S +R+E      G MR + F   D++ F   E+   + 
Sbjct: 115 SKIILKEINFNKVFPINFYQIYSKFRDEARPRC-GTMRSKEFVMKDSYSFHLNEKSLEKT 173

Query: 405 LKIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDALW 441
             I       I+     +  +++  T       S    
Sbjct: 174 YHIMQETYKKIFNRLNLDYFVIRAKTGKIGGFISHEFH 211



 Score = 47.1 bits (110), Expect = 0.010,   Method: Composition-based stats.
 Identities = 24/145 (16%), Positives = 49/145 (33%), Gaps = 11/145 (7%)

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNLPLW-- 549
               Q+        N   +  +++K   + +     G I R +   IE N+  N  +W  
Sbjct: 399 GHIFQLGDKYSKPLNYSLLKDYNKKK--IFMGCYGIG-ISRLVSTYIEQNYDSNGIIWNE 455

Query: 550 -LSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
            ++P +  +  I    +     +++EI   L +  + +      E          +  IP
Sbjct: 456 EIAPFKVAIIPININFSIKVKNFSEEIYYKLCNLKIDVLFYDNVERPGIMFSNIELIGIP 515

Query: 605 IIIICGDKEASERSIGIRRFGSTTT 629
            I+I  DK      I  +   +   
Sbjct: 516 HILIISDKNLKNSIIEYKNRITGDK 540


>gi|210623497|ref|ZP_03293842.1| hypothetical protein CLOHIR_01792 [Clostridium hiranonis DSM 13275]
 gi|210153555|gb|EEA84561.1| hypothetical protein CLOHIR_01792 [Clostridium hiranonis DSM 13275]
          Length = 563

 Score =  111 bits (277), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 51/230 (22%), Positives = 95/230 (41%), Gaps = 11/230 (4%)

Query: 4   DIKLTFPDGSIKNFPV----HATGSDVAESISRSLAKKAVAVAINGK-VCDLSDPVREGS 58
           ++K+   DG I+ F      +   S++A+  + +     V  AI GK +CDL + V  G 
Sbjct: 15  EVKV---DGKIEKFERKNRDYLLLSEIADEFNEAH-DGVVTAAIKGKSICDLYEKVYNGE 70

Query: 59  -IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSD 117
            +E++   +     V     + +   A + ++ +V+V +   + +G YY  D  +  +  
Sbjct: 71  EVELLDFYNEDGARVYFRGLSFVFITACRKLYEKVEVTVEHSLSNGVYYSMDIGRELTDK 130

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           ++  I+ KM+ I+A D P  K  +    A ++F       K E++E+   +EN  +Y   
Sbjct: 131 DIEDIKNKMRNIVAEDCPIKKVVMDKLDAGQIFRILSREDKAELIEN-KDEENAKIYVCE 189

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNT 227
            + D   G    ST  +  F  +    G    G S    L          
Sbjct: 190 GYIDHFYGMMPPSTKYMDVFDVVKYKKGVVLMGPSEDDALVPEKFIDQPK 239


>gi|195327660|ref|XP_002030536.1| GM24519 [Drosophila sechellia]
 gi|195590346|ref|XP_002084907.1| GD12590 [Drosophila simulans]
 gi|194119479|gb|EDW41522.1| GM24519 [Drosophila sechellia]
 gi|194196916|gb|EDX10492.1| GD12590 [Drosophila simulans]
          Length = 333

 Score =  111 bits (277), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 60/252 (23%), Positives = 113/252 (44%), Gaps = 28/252 (11%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKV-CDLSDPVRE-GS 58
           +P D+ L   +G+I      +T  + A+ +S    K++    I+G V  D+  P++E  +
Sbjct: 65  LPEDVTLVM-NGNI------STPFNCAQHLSEGHCKRSALALIDGSVPWDMHRPLQESCT 117

Query: 59  IEIITPEDPRSL---AVIRHSCAHIMAEAVQSIW-PEVQVAI----GPIIEDG-FYYDF- 108
           ++++                +C+ ++  A+   + PE  + +    GP I+ G F +D  
Sbjct: 118 LQLLNFHVSEPHVVNKAFWRTCSFMLGAALNRAFKPEANLQLHSFPGPNIKSGSFVHDIV 177

Query: 109 --DKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIP 166
              +    + +E+  +  +M ++ A+D    +  +  + A+E+F+  K  YK E L SI 
Sbjct: 178 LQTQNWEPAKEEMRALSAEMVKLAAQDLRIERLDVQQDLAQEMFKDSK--YKSEQLPSIA 235

Query: 167 AKEN--VTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTA 224
            + N  VTLYR G+  D+ RGP V ST  +    K +  A      +       RI G A
Sbjct: 236 QQTNGRVTLYRLGDHIDISRGPMVASTSFLG---KCVISAAHKVAEEGPSGAFYRIQGVA 292

Query: 225 WNTQQELTQYLY 236
             +  +L    +
Sbjct: 293 LPSGFQLNHVAF 304


>gi|24664387|ref|NP_524075.2| mitochondrial ribosomal protein L39 [Drosophila melanogaster]
 gi|27923994|sp|Q9VUJ0|RM39_DROME RecName: Full=39S ribosomal protein L39, mitochondrial;
           Short=MRP-L39; AltName: Full=MRP-L5
 gi|23093441|gb|AAF49686.2| mitochondrial ribosomal protein L39 [Drosophila melanogaster]
          Length = 333

 Score =  111 bits (276), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 60/252 (23%), Positives = 112/252 (44%), Gaps = 28/252 (11%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKV-CDLSDPVRE-GS 58
           +P D+ L   +G+I      +T  + A+ +S    K++    I+G V  D+  P++E  +
Sbjct: 65  LPEDVTLVM-NGNI------STPFNCAQHLSEGHCKRSALALIDGSVPWDMHRPLQESCT 117

Query: 59  IEIITPEDPRSL---AVIRHSCAHIMAEAVQSIW-PEVQVAI----GPIIEDG-FYYDF- 108
           ++++                +C+ ++  A+   + PE  + +    GP I+ G F +D  
Sbjct: 118 LQLLNFHVSEPHVVNKAFWRTCSFMLGAALNRAFKPEANLQLHSFPGPNIKSGSFVHDIV 177

Query: 109 --DKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIP 166
              +      +E+  +  +M ++ A+D    +  +  + A+E+F+  K  YK E L SI 
Sbjct: 178 LQTQNWEPGKEEMRALSAEMVKLAAQDLRIERLDVQQDLAQEMFKDSK--YKSEQLPSIS 235

Query: 167 AKEN--VTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTA 224
            + N  VTLYR G+  D+ RGP V ST  +    K +  A      +       RI G A
Sbjct: 236 QQTNGRVTLYRLGDHIDISRGPMVASTSFLG---KCVISAAHKVAEEGPSGAFYRIQGVA 292

Query: 225 WNTQQELTQYLY 236
             +  +L    +
Sbjct: 293 LPSGFQLNHVAF 304


>gi|269792970|ref|YP_003317874.1| AAA ATPase [Thermanaerovibrio acidaminovorans DSM 6589]
 gi|269100605|gb|ACZ19592.1| AAA ATPase [Thermanaerovibrio acidaminovorans DSM 6589]
          Length = 547

 Score =  111 bits (276), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 44/195 (22%), Positives = 86/195 (44%), Gaps = 5/195 (2%)

Query: 12  GSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPEDPRSL 70
           GSI    +  TG+++       +A + VA  +N  +  LS  +   S +E +       +
Sbjct: 11  GSI-ECEMPLTGAELLSLAKAEMAHQVVACRVNHYLRPLSWVIDGASDVEFVDTGSFEGM 69

Query: 71  AVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEII 130
            V R + + ++  A +    +  + I   + DG+Y +    +  S  ++  I  +M+ +I
Sbjct: 70  EVYRRTLSFLLVMASKRALGQDVI-IRHSMSDGYYCELVGGEA-SQGDVEAIRGEMKRLI 127

Query: 131 ARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRS 190
             + P  ++ L  ++A+ +FE +    K  +L    A + V +YR  + +     P   +
Sbjct: 128 DLNIPINREVLPLDRAKGIFERQGNLDKARLL-KWTAMDPVVVYRCADTYGYFYAPLASN 186

Query: 191 TGQVKKFFKLMKVAG 205
           TGQVK F  L    G
Sbjct: 187 TGQVKVFDLLYYPPG 201


>gi|188588485|ref|YP_001922238.1| phosphoribulokinase [Clostridium botulinum E3 str. Alaska E43]
 gi|188498766|gb|ACD51902.1| putative threonyl-tRNA synthetase/uridine kinase [Clostridium
           botulinum E3 str. Alaska E43]
          Length = 548

 Score =  111 bits (276), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 47/182 (25%), Positives = 79/182 (43%), Gaps = 2/182 (1%)

Query: 36  KKAVAVAINGKVCDLSDPVRE-GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           K      +NGK  +L D + E G IE I       L +   +   I  +A   ++P  ++
Sbjct: 31  KNIALCKLNGKYHELRDIISESGEIETINFNTEMGLNIYTRTLQFIFIKATLDLFPNSKI 90

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            I   I  G + +  KE P +  ++  I++KM+EII ++       +S ++A  +F+   
Sbjct: 91  KIEHSISKGLFGEVIKEDPLNEKDIKLIKEKMKEIIIKNVLINSIRISKDEAINIFDQYG 150

Query: 155 EAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNR 214
              KV +LE+    E V LY     +D   G    STG +K F  +   +G   R     
Sbjct: 151 MEDKVLLLENSNLNE-VKLYELEGRYDYFYGQMAYSTGIIKAFDLIYYESGFILRSPEKE 209

Query: 215 PM 216
            +
Sbjct: 210 NL 211


>gi|284044947|ref|YP_003395287.1| prolyl-tRNA synthetase [Conexibacter woesei DSM 14684]
 gi|283949168|gb|ADB51912.1| prolyl-tRNA synthetase [Conexibacter woesei DSM 14684]
          Length = 560

 Score =  111 bits (276), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 36/215 (16%), Positives = 74/215 (34%), Gaps = 13/215 (6%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +   L        ++E   H+ + R   +  +   G+G+  +   GW++ + +   +R +
Sbjct: 5   SSYLLPTEKQAPADAEAISHQLMVRAGLIRQL---GAGLWTYLPAGWRVHRRVEQIIREE 61

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E+  P +     W+++G        +   +      +      L   +     
Sbjct: 62  MDAIGGQEMLMPLLNPAEPWRRTGR-------IEIDEIFKLEDRKGTEMVLAMTHEEIVT 114

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
                 ++SYR+LP  L +     R+EP      L R R F   D++ F   E    E  
Sbjct: 115 THVAQVVRSYRDLPQILYQIQVKERDEPRPRAGVL-RTREFRMKDSYSFDRDEAGLEESY 173

Query: 406 -KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDA 439
            K       I++  G E   V+          +  
Sbjct: 174 AKHIVAYDRIFERTGLEWYRVESDVGMMGGTAAHE 208



 Score = 71.7 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 20/118 (16%), Positives = 44/118 (37%), Gaps = 7/118 (5%)

Query: 533 RFIGIMIENFKGN----LPLWLSPIQAIVTTITSSAVE---YAQEIANLLKSHHLSIETD 585
           R +   +E +  +     P  L+P  A +  I+    E   +A  +   LK+  L +  D
Sbjct: 437 RIVAAAVEQYADDAGIAWPRALAPFDAELVVISRGESEERAFADRLYEELKATGLDVLYD 496

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            R+     K  +  +   P+ +  G +  +   + ++       + V L  A   + +
Sbjct: 497 DRDAGPGEKFADAELLGAPLRVTVGKRTLAAGELEVQLRRGRERRSVPLEGAAEAVHE 554


>gi|323475075|gb|ADX85681.1| threonyl-tRNA synthetase editing domain protein [Sulfolobus
           islandicus REY15A]
 gi|323477807|gb|ADX83045.1| threonyl-tRNA synthetase editing domain protein [Sulfolobus
           islandicus HVE10/4]
          Length = 386

 Score =  111 bits (276), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 21/101 (20%), Positives = 53/101 (52%)

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
             LP WL+PIQ  +  +    ++++ ++A  L+   + +  D  ++++  KIR    + I
Sbjct: 267 PTLPDWLNPIQVRLLPVKKDFLDFSIQVAERLRKEGIRVNIDDLDDSLGNKIRRAGTEWI 326

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P++II G++E    ++ ++   +   + +S+ + +  +  E
Sbjct: 327 PLVIIIGEREVKTSTLTVKIRANNEQKSMSIEELVKEIKDE 367


>gi|332885412|gb|EGK05661.1| hypothetical protein HMPREF9456_02463 [Dysgonomonas mossii DSM
           22836]
          Length = 555

 Score =  111 bits (276), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 51/281 (18%), Positives = 93/281 (33%), Gaps = 17/281 (6%)

Query: 16  NFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIR 74
           +FP  +    + E          V   +N K   L   V    ++  +    P  +    
Sbjct: 17  DFPAGSNLIKILEGFDVKSQSTIVNAKVNNKTEPLDYCVYHNKTVTFVDLTSPSGMRAYV 76

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDS 134
            S   ++A+AV   +PE Q+ I   I  G++             +  I+ KMQ+ I  D 
Sbjct: 77  RSLCFLLAKAVSETFPEAQLYIEHPISLGYFCRISDRATIDEKAIEAIKTKMQQYIEADM 136

Query: 135 PFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQV 194
            F       +K  ++F ++    K  +LES   +     YR     D   G  V ST  +
Sbjct: 137 RFEAVEEETDKVVKMFRNRGFEDKALLLES-SGELYSKYYRLNGSVDYFYGCLVPSTKYI 195

Query: 195 KKFFKLMKVAG-AYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREM 253
             F   +   G      + + P+      +         ++L FL      +   + +  
Sbjct: 196 HLFGLELYNDGLLLRVPNRSNPIELEPIISQEKMYNVYKEHLKFLNIIGLDNVGDMNKAN 255

Query: 254 DLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEI 294
            +  +                I +   +Y  +KI +   EI
Sbjct: 256 KMGTMPN--------------IIKVSEAYQEKKIANIATEI 282


>gi|217033470|ref|ZP_03438900.1| hypothetical protein HP9810_1g84 [Helicobacter pylori 98-10]
 gi|216944175|gb|EEC23603.1| hypothetical protein HP9810_1g84 [Helicobacter pylori 98-10]
          Length = 577

 Score =  110 bits (275), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 44/217 (20%), Positives = 86/217 (39%), Gaps = 11/217 (5%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++          +++  + H+ LA+   ++ +   GSG+  +     K+   + +   +
Sbjct: 3   FSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQV---GSGIYNFLPLAKKVLDKIENITHK 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++++   + I    V+   LW++SG  D Y   +   K   D       F L P      
Sbjct: 60  RMQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKDN-----DFVLSPTLEENI 114

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNE 403
             +  + +KSY++L V L +  + +R+E      GL+R R F   D + F    E +  E
Sbjct: 115 TEIAANFIKSYKQLSVHLYQIHTKFRDEIRPRF-GLVRAREFIMKDGYSFHEDAESLDKE 173

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            L   N    I  D G +  +V+  +       S   
Sbjct: 174 FLNTQNAYKEILSDLGLDFRIVEADSGAIGGSKSKEF 210



 Score = 63.6 bits (153), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 18/164 (10%), Positives = 51/164 (31%), Gaps = 8/164 (4%)

Query: 487 IGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
             +  + G I  +         A +++ +  K     +     G       I+ +     
Sbjct: 410 YHKSLEVGHIFKLGQGYAKSLKASFLDKNG-KERFFEMGCYGIGISRLLSAILEQKSDDL 468

Query: 546 LPLWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
             +W    +P   ++        +  + A E+   L+   +    D R+     K+R+  
Sbjct: 469 GCVWTKNTAPFDVVIVVSNWKDEAQKKLAFEVYERLRQKGVDALLDDRDARFGAKMRDFE 528

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +    + +I G +    +     +  +   Q +   +    + +
Sbjct: 529 LIGERLALIIGKQTLESKEFECIKRANLEKQTLKDTELEEKILE 572


>gi|289522181|ref|ZP_06439035.1| phosphoribulokinase family protein [Anaerobaculum hydrogeniformans
           ATCC BAA-1850]
 gi|289504017|gb|EFD25181.1| phosphoribulokinase family protein [Anaerobaculum hydrogeniformans
           ATCC BAA-1850]
          Length = 548

 Score =  110 bits (275), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 44/201 (21%), Positives = 85/201 (42%), Gaps = 6/201 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
           M   +++    G+   F     G DV  +  +      VA  +N  +  L   V + S I
Sbjct: 1   MSFVVEV--KRGNRLVFERPVKGQDVLVACGKGHESNIVAWRVNRYLRPLDWVVDDDSCI 58

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           E +       + V R S + ++  A  +   E  V I   I DG+Y + +   P +  +L
Sbjct: 59  EFVDTSSFEGMEVYRRSLSFLLVLACMNALSE-DVFIRHSISDGYYCELESG-PVTEKKL 116

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             I++++  ++  D P  ++ +S +KA+ +F  +    K  +L    A + + +YR    
Sbjct: 117 DAIKRELDRLVNADIPIKREVISGDKAKRIFTRQGNMDKANLL-RWAAVDPIEVYRSDNT 175

Query: 180 FDLCRGPHVRSTGQVKKFFKL 200
           +     P   STG +K +  +
Sbjct: 176 YGYFYAPLAPSTGYMKTYDLI 196


>gi|260949659|ref|XP_002619126.1| hypothetical protein CLUG_00285 [Clavispora lusitaniae ATCC 42720]
 gi|238846698|gb|EEQ36162.1| hypothetical protein CLUG_00285 [Clavispora lusitaniae ATCC 42720]
          Length = 565

 Score =  110 bits (275), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 45/258 (17%), Positives = 86/258 (33%), Gaps = 26/258 (10%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINT 296
                   H  LAR      ++    G++ W   G  +   +   + + ++    EEI+ 
Sbjct: 26  QVLPRIPTHELLARLQY---VSPPKPGLVHWMPMGMLVLNKMKQLVHKHMQDAGAEEISL 82

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
             +    LW+Q+G W    A +F +K +         + L P        +    + SY+
Sbjct: 83  SALSHSDLWKQTGRWG--GAELFRLKDSK-----GAEYCLAPTCEEEVTHLVQQNVASYK 135

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
            LP+   +  + +R+E      GL+R R F   DA+ F   E       +  +   +   
Sbjct: 136 NLPLLFYQINTKFRDEKRPR-SGLLRGREFVMKDAYSFDVSEAEAMRAYETMSRAYAGVF 194

Query: 417 ------------DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKN-SSQDRI 463
                       D G     +          G D L++  +      ++   +  ++D  
Sbjct: 195 AALRAPCVRADADTGEIGGSMSHEWHYVHAAGEDTLFECTDCGRTSNVEMTPSFPAEDAA 254

Query: 464 NTGVLLGEGAF-YGPKFE 480
                  E A  Y P  +
Sbjct: 255 EPSKTSLEAAVAYFPTID 272



 Score = 62.9 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/149 (20%), Positives = 50/149 (33%), Gaps = 23/149 (15%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH----PVMIHRAVFGSIERFIGIMIE---- 540
           R  +        +  +R     V            PV++     G I R I  + E    
Sbjct: 381 RAIEVAHTFYLGDRYTRALDCTVEVPGADGTVSRQPVLMGCYGIG-ISRIIAALAEINRD 439

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIREHS 599
           +     P  ++P    V    + A E A E+A  L    +    D R +  +  KIRE  
Sbjct: 440 SHGLRWPAAIAPWHVTVV--DAGAQEQAHEVARSLGDMEVR--LDARPSVRLGRKIRESH 495

Query: 600 IKKIPIIIICGDK----EASERSIGIRRF 624
              IP++++ G +    E       +R  
Sbjct: 496 AMGIPLVLVVGKRYPTVEIE-----VRGR 519


>gi|225719338|gb|ACO15515.1| Mitochondrial 39S ribosomal protein L39 [Caligus clemensi]
          Length = 330

 Score =  110 bits (275), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 53/232 (22%), Positives = 100/232 (43%), Gaps = 20/232 (8%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS----IEIITPEDPRSL-AVIRH 75
           +T  + A+ I  SL +++    +N ++ D++ P+ E S    I    PEDP  L      
Sbjct: 79  STPFNAAQHIHVSLIERSALATVNDQLWDMNRPLEEDSIVKFIHFQQPEDPYHLNKAFWR 138

Query: 76  SCAHIMAEAVQSIWPEVQV-----AIGPIIEDG-FYYDFD---KEQPFSSDELAQIEKKM 126
           SC+ ++   +++++ +           P ++ G F YD D    +   S +EL      M
Sbjct: 139 SCSFMLGVTLENLFQDNYFIELHSFPAPNVQSGSFVYDADLKFLDWTPSKEELMSFGAYM 198

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKV--EILESIPAKENVTLYRQGEWFDLCR 184
             +  ++ PF +  +    A+ +FE  +   K    I  +  +  +VTLYR GE  D+  
Sbjct: 199 HRLSEKELPFERLTVDTSVAQRIFEDNQYKSKQIPSIAANSKSGNSVTLYRLGEHVDISG 258

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           GP V ++G + +   +M       R + +   + R  G A      L  + +
Sbjct: 259 GPMVGNSGFLGRRCSIMAAH----RIEHDNVEMYRFQGVALPKGIFLDHHAF 306


>gi|330836102|ref|YP_004410743.1| Prolyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
 gi|329748005|gb|AEC01361.1| Prolyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
          Length = 586

 Score =  110 bits (274), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 36/175 (20%), Positives = 74/175 (42%), Gaps = 12/175 (6%)

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHL 304
           +  L R   +  +   G+G+      G++  + + S +R+++     +EI  P V    +
Sbjct: 23  YELLLRAGFIRQL---GAGIFTMLPLGYRSVKKIESIIRQEMDAIGGQEILMPVVNPADI 79

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W+ +G + S    M   +      +  R   L   +      V    + SY+ LP  + +
Sbjct: 80  WKSTGRYYSIDKEMSRFQD-----RVGRDMVLAMTHEEAVTDVAKGEIDSYKRLPQLVYQ 134

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
             + +R++P     GL+RVR FT  D++ F   +    +  + H    + ++ FG
Sbjct: 135 LQTKWRDDPRPR-AGLIRVREFTMKDSYSFDRDQAGMEKQYRAH--YSAYFRIFG 186



 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/165 (15%), Positives = 58/165 (35%), Gaps = 18/165 (10%)

Query: 497 QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL----SP 552
           Q+           Y +    +  PV++     G + R +  + E +  +  L L    +P
Sbjct: 419 QLGTRYSEAMGCLYQDEDGVRK-PVIMGSYGIG-VGRMLACLAEEYHDDSGLALPVTVAP 476

Query: 553 IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
            Q  + ++     +    I   L    + +  D R E+   K  +  +  +PI I  G++
Sbjct: 477 YQVHLVSLVKD-EQVGDTIYGRLTHAGIEVLYDDRKESAGVKFADADLLGMPIRITVGNR 535

Query: 613 EASERSIGIRRFG-----------STTTQKVSLLDAIPILTKESL 646
              E  + ++                  + ++L D++    KE +
Sbjct: 536 SLKEGKVEVKLRSQPDEIHTFDLADLEKEIIALADSMEKNLKEKI 580


>gi|225016294|ref|ZP_03705486.1| hypothetical protein CLOSTMETH_00197 [Clostridium methylpentosum
           DSM 5476]
 gi|224950969|gb|EEG32178.1| hypothetical protein CLOSTMETH_00197 [Clostridium methylpentosum
           DSM 5476]
          Length = 574

 Score =  110 bits (274), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 39/204 (19%), Positives = 83/204 (40%), Gaps = 11/204 (5%)

Query: 221 YGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLI 280
            GT   ++    +Y     ++    H  + +   +  +      ++       +I   + 
Sbjct: 5   DGTMLLSKLLGERYKEKPADASIPSHIFMLKGGYIRQVGNGIYSML--MPT-KRIVNKIE 61

Query: 281 SYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPM 339
           + +R ++   D +E+  P VL + LW +SG ++S  + +          +    + L   
Sbjct: 62  NIIREEMDAIDGQEVLFPVVLPRELWDESGRYESVGSELVRFHD-----RSGGDYVLGMT 116

Query: 340 NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQ 399
           +    V +  +  +SY + P  + +  + +R+EP  S  GL+RVR FT  DA+ F T ++
Sbjct: 117 HEEAAVHLARNEAQSYAKYPFMIYQIQTKFRDEPR-SRGGLIRVREFTMKDAYSFHTSQE 175

Query: 400 MFNECLK-IHNLIISIYKDFGFEK 422
                    H     I++  G  +
Sbjct: 176 DLERYYDICHKAYERIFERVGLPE 199



 Score = 81.4 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 61/165 (36%), Gaps = 11/165 (6%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKG 544
           + R  + G I Q+           Y +   ++  P+M    +   + R    +IE +   
Sbjct: 407 LNRGVEVGNIFQLGTKYTESMQMVYTDQDGKQQTPIMGCYGI--GVGRLAACIIESHHDD 464

Query: 545 NLPLWL---SPIQAIVTTITSSAVE---YAQEIANLLKSHHLSIETDFRNETINYKIREH 598
             P+W    +P Q  +  +++  ++    A+E+ + L  +   +  D R      +  + 
Sbjct: 465 YGPIWPYAVAPWQIHICALSNKKMDVQPIARELYDKLSKN-YEVILDDRGANAGVQFADA 523

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +  +PI I+   K      + I     +   KV L D    + K
Sbjct: 524 DLLGVPIRIVVSVKNIENGEVEISTRDKSIQTKVKLEDIEAEIAK 568


>gi|15835287|ref|NP_297046.1| prolyl-tRNA synthetase [Chlamydia muridarum Nigg]
 gi|270285461|ref|ZP_06194855.1| prolyl-tRNA synthetase [Chlamydia muridarum Nigg]
 gi|270289472|ref|ZP_06195774.1| prolyl-tRNA synthetase [Chlamydia muridarum Weiss]
 gi|301336858|ref|ZP_07225060.1| prolyl-tRNA synthetase [Chlamydia muridarum MopnTet14]
 gi|13633968|sp|Q9PK01|SYP_CHLMU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|7190706|gb|AAF39493.1| prolyl-tRNA synthetase [Chlamydia muridarum Nigg]
          Length = 579

 Score =  110 bits (274), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 38/213 (17%), Positives = 85/213 (39%), Gaps = 9/213 (4%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
                   +E+    +  L +   LF  ++   G+  +     ++   +   +R ++   
Sbjct: 8   YRTSKNANKEASVLSYELLEKAGYLFKTSK---GIYSYTPLFQRVILKMTEIIREELNAI 64

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
             +E+  P +    LWQ++G W+++ +        D   ++ +   L P +        +
Sbjct: 65  GGQEVCLPLLQSAELWQKTGRWEAFLSEKLLYVLKD---RENKEMCLAPTHEEVVSEFVS 121

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIH 408
             L   ++LPV L + G+ +R+E      GLMR + F  +D++ F  + EQM  +  K+ 
Sbjct: 122 QWLTGRKQLPVHLYQIGTKFRDEIRPRF-GLMRAKEFLMEDSYTFSDSPEQMEEQYAKLR 180

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALW 441
                I+     + ++V        +  S+   
Sbjct: 181 LAYQRIFDRLNLKYVIVTADGGKIGKGKSEEFH 213



 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 54/157 (34%), Gaps = 9/157 (5%)

Query: 491 WQCGTIQVDFNLPSRF-NAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG---- 544
           +Q   +   FNL +R+   F V    E     +     +G  + R +   IE        
Sbjct: 406 FQGVEVAHIFNLGTRYTECFSVGFQDENGEKQLCWMGTYGIGVGRTLAACIEQLADSKGI 465

Query: 545 NLPLWLSPIQAIVT--TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
             PL ++P    +      +     A +    L +       D RNE + +K+++  +  
Sbjct: 466 VWPLAVAPFSITILYNGGDTEGEAVASQFYQSLNTAGFEPLLDDRNERLGFKLKDSDLLG 525

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
           IP  +I G        + I    S     +S  + + 
Sbjct: 526 IPYKLIIGKSFQKTGMLEIESR-SGEKYNISPENLLD 561


>gi|253580846|ref|ZP_04858109.1| phosphoribulokinase/uridine kinase [Ruminococcus sp. 5_1_39B_FAA]
 gi|251847916|gb|EES75883.1| phosphoribulokinase/uridine kinase [Ruminococcus sp. 5_1_39BFAA]
          Length = 555

 Score =  110 bits (274), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 44/214 (20%), Positives = 86/214 (40%), Gaps = 6/214 (2%)

Query: 6   KLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITP 64
            +T   G  K +P     S++ +    S     + V +NG++ +L   ++ +  IE +T 
Sbjct: 7   NVTIQ-GITKQYPEKIPYSEIVKEYEGSTDAPVMLVIVNGRLRELHKHLKADCEIEFVTS 65

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQ---VAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +DP        S + I+ +A+  +  +     V I   +  G+Y+          + + +
Sbjct: 66  KDPIGHKTYCRSASLILLKAIYDVAGQENIDSVMIHYSVGSGYYFTMKGPMALDQEFIDK 125

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           ++ +M  I+  + P +K+ +S  +A  LF       K E L +      V LY  G + D
Sbjct: 126 VKAQMHRIVDENLPIVKRSVSTSEAVALFHKHHMYDK-EKLFNYRRSSAVNLYSIGSFED 184

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRP 215
              G     TG +K F   +   G   +  +   
Sbjct: 185 YFYGFMANHTGYIKTFDLFLYEGGFVLQLPTQNE 218


>gi|170758228|ref|YP_001785524.1| putative threonyl-tRNA synthetase/uridine kinase [Clostridium
           botulinum A3 str. Loch Maree]
 gi|169405217|gb|ACA53628.1| putative threonyl-tRNA synthetase/uridine kinase [Clostridium
           botulinum A3 str. Loch Maree]
          Length = 552

 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 58/237 (24%), Positives = 96/237 (40%), Gaps = 2/237 (0%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           +KL  P+GS        T  DV +          V   I+ +  +L+  V+ EG    + 
Sbjct: 4   LKLYMPNGSNILVSRDKTLYDVVKENKLEDNIPIVLGKIDEEYYELTSTVKKEGVFIPVD 63

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
             D   L     +   I  +AV  ++PE  V I   +  G Y +  K+   + +++ +I+
Sbjct: 64  ITDSIGLKTYVRTLQFIFIKAVLDLYPESTVVIEHSLGKGLYGEIHKKLSLNENDILKIK 123

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            KM EII +D    K  +  EKA E+FE  +   KV +L   P +E V LY     +D  
Sbjct: 124 NKMNEIINKDIKIKKISVKKEKAIEIFEEYRMKDKVRLLSHTPHEE-VKLYELDGRYDYF 182

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
            GP   STG +K F  +    G   R    +   +      +    ++ +      +
Sbjct: 183 YGPMAYSTGAIKNFDIMYYDPGFILRYPREKDPFNIPEFVEYKKLTKIFRETEKWAK 239


>gi|154482671|ref|ZP_02025119.1| hypothetical protein EUBVEN_00346 [Eubacterium ventriosum ATCC
           27560]
 gi|149736447|gb|EDM52333.1| hypothetical protein EUBVEN_00346 [Eubacterium ventriosum ATCC
           27560]
          Length = 552

 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 45/250 (18%), Positives = 83/250 (33%), Gaps = 23/250 (9%)

Query: 4   DIKLTFPDGSIK-NFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
            IK+T   G     +    T  ++A         + +    NG + +LS  +    +I  
Sbjct: 1   MIKVTI--GQKTYEYEDGTTLYEIAREHQSEYKHQIILAKCNGTLSELSKVLVENCNIAF 58

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPI---IEDGFYYDFDKEQPFSSDE 118
           +T          R S   +M +A  ++     +    +   +  G+Y             
Sbjct: 59  VTTASFVGNECYRRSATFLMLKAFYAVAGRNNIEKISVHCSVSKGYYCQVFGNVEVDDKL 118

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L  +  +M ++  RD    K+ +   KA + FE      KV +L        V +YR   
Sbjct: 119 LKNVRNEMIKLCKRDILIQKESIPTAKAIKKFERYGMKDKVHLL-KYRRSSAVNIYRIEG 177

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D   G    STG +K F  +    G   +                 T++E      F+
Sbjct: 178 FEDYFYGYMAYSTGILKYFDLIKYDEGFVLQL---------------PTKEEPEVVPEFV 222

Query: 239 EESEKRDHRK 248
             ++  +  K
Sbjct: 223 PRNKVYNVIK 232


>gi|149030653|gb|EDL85690.1| threonyl-tRNA synthetase-like 1, isoform CRA_b [Rattus norvegicus]
          Length = 186

 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 54/109 (49%), Gaps = 3/109 (2%)

Query: 547 PLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD-FRNETINYKIREHSIKKIPI 605
           PLWLSP Q +V  + +   +YA+++   L++  L  + D     T++ ++R   +     
Sbjct: 76  PLWLSPFQVVVIPVRTEQEDYARQVQQCLQAAGLVSDLDADCGLTLSRRVRRAQLAHYNF 135

Query: 606 IIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK--ESLPPDCQK 652
             + G +E S+ S+ +R   +    +  L +++  L +  ++  P+ ++
Sbjct: 136 QFVVGQREQSQMSVNVRTRDNRQLGERGLAESVQRLLELQDARVPNAEE 184


>gi|195018487|ref|XP_001984790.1| GH14833 [Drosophila grimshawi]
 gi|193898272|gb|EDV97138.1| GH14833 [Drosophila grimshawi]
          Length = 332

 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 60/260 (23%), Positives = 107/260 (41%), Gaps = 28/260 (10%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKV-CDLSDPVRE-GS 58
           +P D+ L             +T  + A+ +S    ++AV   ++G V  D+  P++E  +
Sbjct: 64  LPEDVTLVMN-------SHISTPYNCAQHLSEGHCQRAVLALLDGSVPWDVHRPLQESCT 116

Query: 59  IEIITPEDPRSL---AVIRHSCAHIMAEAVQSIWPE-----VQVAIGPIIEDG-FYYDF- 108
           ++++                +C+ ++  A+Q ++ E     +     P I+ G F +D  
Sbjct: 117 LQLLNFNVSEPHVVNKAFWRTCSFMLGAALQRVFKEEAKLQLHSFPSPNIKSGSFVHDIV 176

Query: 109 --DKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIP 166
              +    +  E+  I  +M ++ A+D    +  +  E A+E+F+     YK E L SI 
Sbjct: 177 LGAQNWQPTKAEMRAISAEMVKLAAQDLRIERLEVDQELAKEMFKESH--YKSEQLPSIA 234

Query: 167 --AKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTA 224
              +  VTLYR GE  D+ RGP V ST  + K              +       RI G A
Sbjct: 235 QQNQSRVTLYRLGEHIDISRGPMVASTRFLGKCTV---STAHKLTDEGPSNAFYRIQGVA 291

Query: 225 WNTQQELTQYLYFLEESEKR 244
             +   L  + Y L E   +
Sbjct: 292 LPSGFMLNHFAYGLLEQRSQ 311


>gi|229003388|ref|ZP_04161210.1| Prolyl-tRNA synthetase 2 [Bacillus mycoides Rock1-4]
 gi|228757863|gb|EEM07086.1| Prolyl-tRNA synthetase 2 [Bacillus mycoides Rock1-4]
          Length = 257

 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 36/170 (21%), Positives = 75/170 (44%), Gaps = 15/170 (8%)

Query: 486 AIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----E 540
             G+  Q GT      N    F+  +++ + +  +   +H+  +G   R IG +I    +
Sbjct: 2   HDGKALQTGTSHNFGTNFSEAFDIKFLDRNGKWQY---VHQTSWGVSTRMIGGLIMVHSD 58

Query: 541 NFKGNLPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           N    +P  ++P+Q ++  I       +E A ++   ++     ++ D  N+T  +K  E
Sbjct: 59  NNGLVMPPKVAPVQVVIVPIAQHKEGVLEKATQLQGRIQKV-ARVKIDASNKTPGWKFNE 117

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS---LLDAIPILTKE 644
           + +K +PI +  G K+  +  + + R  +   + VS   L + I  L  E
Sbjct: 118 YEMKGVPIRLEVGPKDIEKNQVVLVRRDTKEKEFVSMDQLEERITSLLDE 167


>gi|322804464|emb|CBZ02014.1| uridine kinase [Clostridium botulinum H04402 065]
          Length = 552

 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 55/237 (23%), Positives = 93/237 (39%), Gaps = 2/237 (0%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIIT 63
           +KL  P+GS        T  DV +          V   I+ +  +L+  V+ EG    + 
Sbjct: 4   LKLYMPNGSNILVSGDKTLYDVVKENKLQDNIPIVLGKIDEEYYELTSTVKKEGVFIPVD 63

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
             D   L     +   I  +AV  ++P   V I   +  G Y +  K    + +++ +I+
Sbjct: 64  ITDSMGLKTYVRTLQFIFIKAVLDLYPGSTVVIEHSLGKGLYGEIHKTLSLNENDILKIK 123

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
            +M EII +D    K  +  E+A E+F   K   KV +L  IP +E V LY     +D  
Sbjct: 124 NRMNEIINKDIKIKKISVKKERAIEIFNEYKMKDKVRLLSHIPHEE-VKLYELDGRYDYF 182

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
            G    STG +K F  +    G   R    +   +      +    ++ +      +
Sbjct: 183 YGSMAYSTGAIKNFDIMYYDPGFILRYPREKDPFNIPEFVEYKKLTKIFRETEKWAK 239


>gi|291546787|emb|CBL19895.1| Uridine kinase [Ruminococcus sp. SR1/5]
          Length = 555

 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 44/208 (21%), Positives = 82/208 (39%), Gaps = 6/208 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           + IK+T  +G  + +P     S++            + V  NGK+ +L   ++ + ++  
Sbjct: 4   TMIKVTI-NGETREYPKMTPYSEIIRDYEGKTEYPVILVTENGKLRELHKKLQHDCTLGF 62

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPE---VQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           IT +D       R S   I+ +A+  +  +     V I   I +  Y+          + 
Sbjct: 63  ITAKDSAGRKTYRRSAIFILLKAIFDVAGKENVDHVVIHYSIGNALYFTMKGSATLDQEL 122

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L +++ +M+E++ R  P  K+ +S + A  +F       K E L        V +Y    
Sbjct: 123 LDRVKVRMRELVERKLPICKRSVSTDDAVSMFHRHHMYDK-EKLFRYRRVSRVNIYSLEN 181

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGA 206
           + D   G     TG VK F   +   G 
Sbjct: 182 FEDYFYGFMAPDTGYVKYFDLQLYDEGF 209


>gi|31544425|ref|NP_853003.1| prolyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)]
 gi|81834139|sp|Q7NBP5|SYP_MYCGA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|31541270|gb|AAP56571.1| Prolyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)]
 gi|284930481|gb|ADC30420.1| Prolyl-tRNA synthetase [Mycoplasma gallisepticum str. R(high)]
          Length = 474

 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 65/424 (15%), Positives = 149/424 (35%), Gaps = 58/424 (13%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KD 289
                   +++    + ++  + +L H +     + F    GWKI+Q +   + ++  + 
Sbjct: 4   KKNLASSKDDNISDWYTEVISKGNLIHYSNIKGFMSF-LPNGWKIWQLIKKELTKEFDQR 62

Query: 290 DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
           D  E+  P ++ Q+ +  +  H + +   +F V     T  +   + L+P +      ++
Sbjct: 63  DILELCLPSLISQNDFLLEKKHLEGFAPELFIVT---KTSNETEKYILRPTSEIAFCNLW 119

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKI 407
              L++YR+LP++  ++ SV+R E   +    +R   F   + H  F T+EQ  +  +  
Sbjct: 120 RETLRNYRQLPIKHNQWTSVFRVEK--NTRPFLRNSEFFWHEIHSCFETEEQSNDFAV-- 175

Query: 408 HNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGV 467
                                           +W   +  +K +L     + +    T  
Sbjct: 176 -------------------------------DIWKLYQRFIKDILCIPLVAGEK---TEA 201

Query: 468 LLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
               GA      E I+ D  G+  Q  T   +  N    F+  Y   +++  +   +   
Sbjct: 202 EKFAGAKTTYTVETIMPD--GQALQSATSHNLSQNFSKAFDIRYQTKNNDYQNVFSMSA- 258

Query: 527 VFGSIERFIGIMIENFKGNLPLW-LSPIQAIVTTITSSAVEYAQEIANLLKS------HH 579
             G   R IG +I     +  L   + +     ++     +  QE+   LK         
Sbjct: 259 --GVSTRIIGAIIMTHGDDDGLVFPTKVAPYHISLNCIFDDTNQELNAKLKELANKYSQK 316

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
             +  +   ++    I+   ++    +++ G  +  +  I      +   Q ++L     
Sbjct: 317 YRVHLNVNKDSTGEIIKNSQLRGDCCVLLMGPNDLKKNEIVFIDRITKQKQFINLDHLDQ 376

Query: 640 ILTK 643
            L +
Sbjct: 377 KLEE 380


>gi|167758405|ref|ZP_02430532.1| hypothetical protein CLOSCI_00745 [Clostridium scindens ATCC 35704]
 gi|167664302|gb|EDS08432.1| hypothetical protein CLOSCI_00745 [Clostridium scindens ATCC 35704]
          Length = 555

 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 73/197 (37%), Gaps = 5/197 (2%)

Query: 14  IKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAV 72
           I+ +    T   +A    +      V V IN ++ +L   +  +  +   T   P     
Sbjct: 14  IRQYEAGTTYRQIAAEHQKDYEDDIVLVFINDRLQELHKTLEGDCVMRFETTSGPIGHKT 73

Query: 73  IRHSCAHIMAEAVQSIWPEVQ---VAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
            + S + ++ +AV  +        V I   +  G+Y   +       + L  +E +M+E+
Sbjct: 74  YKRSMSLMLVKAVYDVANHDDIDKVRIHYSVSKGYYCTIEGNIRLDQEFLEHVEARMREM 133

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
           +  D P  K+ +  + A  LF       K E L        V +Y   E+ D   G  V 
Sbjct: 134 VEMDMPINKRSIHTDDAIALFGQHGMHDK-ERLFEYRRVSKVNIYSMNEFEDYYYGYMVP 192

Query: 190 STGQVKKFFKLMKVAGA 206
           S G ++ F   +   G 
Sbjct: 193 SAGYLRYFKLYLYDEGF 209


>gi|67678259|gb|AAH97752.1| LOC733275 protein [Xenopus laevis]
          Length = 300

 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 54/247 (21%), Positives = 103/247 (41%), Gaps = 26/247 (10%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPEDPRSLAV---IRHS 76
           +T    A  +S     K+V   ++G+V D+  P+ +  +I+ +T +D     V      S
Sbjct: 46  STPYHCAMHLSEWYCSKSVLALVDGEVWDMYKPLTKSCNIQFLTFKDEDPEEVNKAYWRS 105

Query: 77  CAHIMAEAVQSIWPEVQV------AIGPIIEDGFYYDFDKEQP-----FSSDELAQIEKK 125
           CA I+   +++ + E  +         P+I   F YD   +        + + L  + K+
Sbjct: 106 CAMILGCVLENAFKEEYMVNLIRAPKIPVISGAFCYDVVLDSQLDDWRPTEENLRSLTKE 165

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN---VTLYRQGEWFDL 182
              +I +D PF    +  + ARE+   +  AYK+ ++E   A+     VT++R G++ DL
Sbjct: 166 AHSLIHKDLPFESMEVEEKVAREI--FQHNAYKLILVEEKAAQSPQGLVTVHRFGDFVDL 223

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
             GPH+  T     F +  +V   +   +     + R  G +      L  +        
Sbjct: 224 TDGPHIPRTS----FCQQYEVTAGHSLPNIPSEHVRRFQGLSLP--WHLKAHHTVWNRLR 277

Query: 243 KRDHRKL 249
           KR  + +
Sbjct: 278 KRSQKLV 284


>gi|45185919|ref|NP_983635.1| ACR233Wp [Ashbya gossypii ATCC 10895]
 gi|44981709|gb|AAS51459.1| ACR233Wp [Ashbya gossypii ATCC 10895]
          Length = 562

 Score =  109 bits (272), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 44/202 (21%), Positives = 89/202 (44%), Gaps = 21/202 (10%)

Query: 253 MDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHW 311
             L +I +  SG++ W   G +  + + + +R+++ +   +E+    +  + LWQ++G W
Sbjct: 37  QGLGYIRQSQSGLVHWLPLGLRCLRNVENIVRKRMDECGGQELQLSTLSPETLWQRTGRW 96

Query: 312 DSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRN 371
           ++    +F ++ A       R + L          + +  L+SY++LP  + + G+ YR+
Sbjct: 97  EN--KELFKLRDAK-----GRNYCLSATCEEDVTWLMSECLESYKDLPSLVYQIGTKYRD 149

Query: 372 EPSGSLHGLMRVRGFTQDDAHVFCTKE----QMFNECLKIHNLIISIYK--------DFG 419
           E      GL+R R F   DA+ F        QMF++  ++++ I +  K        D G
Sbjct: 150 ELRPR-GGLLRSREFLMKDAYSFHADSQDAMQMFHKMKQVYDQIFTDLKVPFKSAAADCG 208

Query: 420 FEKIMVKLSTRPEKRVGSDALW 441
                +          G D L+
Sbjct: 209 SIGGELSREYHYIHEKGEDVLY 230


>gi|254578182|ref|XP_002495077.1| ZYRO0B02794p [Zygosaccharomyces rouxii]
 gi|238937967|emb|CAR26144.1| ZYRO0B02794p [Zygosaccharomyces rouxii]
          Length = 564

 Score =  109 bits (272), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 42/200 (21%), Positives = 83/200 (41%), Gaps = 15/200 (7%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLF----HIAEDGSGVIFWHRKGWKIFQTLIS 281
                   +  F  ++   D  K     +LF     I +  SG++ W   G +    + S
Sbjct: 4   PKVLLRYSHHVFQPKTALDDSIKALPTHELFQTLGFIRQSQSGLVHWLPMGLRTLNKVES 63

Query: 282 YMRRKIKDDYE--EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPM 339
            +R ++  D +  E++   +  + LW+++  W      +F +K A        ++ L P 
Sbjct: 64  IVRHRMNQDGDALEVSLSALSPRSLWEKTNRWS--GTELFKLKDAK-----KASYCLTPT 116

Query: 340 NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT-KE 398
                  + N  + SYR++P  + +    YR+E      GL+R R F   DA+ F + +E
Sbjct: 117 CEEDITNLMNEYITSYRDMPTTVYQITRKYRDELRPR-GGLLRGREFLMKDAYSFASNEE 175

Query: 399 QMFNECLKIHNLIISIYKDF 418
           +      K++ +   I++D 
Sbjct: 176 EALQTFQKMNAVYNKIFQDL 195


>gi|195378436|ref|XP_002047990.1| GJ13727 [Drosophila virilis]
 gi|194155148|gb|EDW70332.1| GJ13727 [Drosophila virilis]
          Length = 332

 Score =  109 bits (272), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 61/260 (23%), Positives = 107/260 (41%), Gaps = 28/260 (10%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKV-CDLSDPVRE-GS 58
           +P D+ L   +         +T  + A+ +S    K++    ++G V  D+  P++E  +
Sbjct: 64  LPEDVTLIMNNNI-------STPFNCAQHLSEGHCKRSALALVDGSVPWDMHRPLQESCT 116

Query: 59  IEIITPEDPRSL---AVIRHSCAHIMAEAVQSIWP-----EVQVAIGPIIEDG-FYYDFD 109
           ++++                +C+ ++  A+Q  +      ++    GP I+ G F +D  
Sbjct: 117 LQLLNFNISEPHVVNKAFWRTCSFMLGAALQRAFRQEANLQLHSFPGPNIKSGSFVHDIV 176

Query: 110 K---EQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIP 166
                   +  E+  I  +M ++ A+D    +  + HE A+E+F+  +  YK E L SI 
Sbjct: 177 LGVQNWVPTKAEMRAISAEMVKLAAQDLRIERLEVDHELAKEMFKDSR--YKSEQLPSIA 234

Query: 167 --AKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTA 224
              +  VTLYR GE  D+ RGP V ST  + K       A      +       RI G A
Sbjct: 235 QQNQSRVTLYRLGEHIDISRGPMVASTRFLGKCTV---SAAHKLANEGPSSAFYRIQGVA 291

Query: 225 WNTQQELTQYLYFLEESEKR 244
                 L    Y L E   +
Sbjct: 292 LPIGFALNHLAYGLLEQRAQ 311


>gi|326793278|ref|YP_004311099.1| prolyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
 gi|326544042|gb|ADZ85901.1| prolyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
          Length = 568

 Score =  109 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 40/209 (19%), Positives = 81/209 (38%), Gaps = 11/209 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++    ++     E+    H  L R   +  +    +G+        ++   + + +R++
Sbjct: 4   SKLLGERFKEKPGEATSISHIYLLRGGYVRQV---TNGIYSLLPPAKRVVSKIENIIRQE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +   D +E+  P  L   LW++SG +D+  + +   K         +   L   +    V
Sbjct: 61  MDAIDGQEVLFPVALPGDLWRESGRFDAVGSELVRFKDRG-----GKDMVLGMTHEEAAV 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +     KSY   P  + +  + +R+EP  +  GL+RVR FT  DA+ F T  E +    
Sbjct: 116 HLARTEAKSYNNYPFMIYQIQTKFRDEPR-ARGGLIRVREFTMKDAYSFHTSQEDLEAYY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
            +       I+   G  + +   S     
Sbjct: 175 EQCLQAYHRIFARAGVPETVCVQSDTGMM 203



 Score = 80.6 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 35/174 (20%), Positives = 63/174 (36%), Gaps = 14/174 (8%)

Query: 482 ILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
             K    R  + G I Q+           Y++S  +   P+M    +   + R +  +IE
Sbjct: 396 HGKLQFKRGVEVGNIFQLGTRYSESMGMTYIDSDGKAKTPIMGCYGI--GVGRLLACIIE 453

Query: 541 NFKGNL-PLWL---SPIQAIVTTITSSAVEYA---QEIANLLKSHHLSIETDFRNETINY 593
                  P+W    +P Q  +  + S   +      EI N L S    +  D RN     
Sbjct: 454 ARHDEWGPIWPMSVAPWQVHICVLKSKKTDMDAIGNEIYNKLSSK-YEVIMDDRNVGAGV 512

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA---IPILTKE 644
           +  +  +  IP+ ++ G+K   E  + +     +  + V L D    +  L  E
Sbjct: 513 QFADADLLGIPVRVVVGEKNLKEGKVELMTRDKSVKKLVDLGDVEKEVAALIAE 566


>gi|158290346|ref|XP_311956.4| AGAP002945-PA [Anopheles gambiae str. PEST]
 gi|157017849|gb|EAA07591.5| AGAP002945-PA [Anopheles gambiae str. PEST]
          Length = 302

 Score =  109 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 60/294 (20%), Positives = 103/294 (35%), Gaps = 47/294 (15%)

Query: 273 WKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKD 330
           + I++ + ++   +I     +E   P  + +   + +  H   +   +  V  + D+   
Sbjct: 18  FAIWKAIRNWFDAEITKLGVKECYFPIFVSRAALEREKTHIADFAPEVAWVTKSGDSEL- 76

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
               A++P +       +   ++SYR+LP+RL ++ +V R E        +R R F   +
Sbjct: 77  AEPIAVRPTSETVMYPAYAKWIQSYRDLPIRLNQWNNVVRWEFKHP-QPFLRTREFLWQE 135

Query: 391 AHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMK 449
            H  F +K++   E L I +L   +Y D     ++    T  EK  G D           
Sbjct: 136 GHTAFASKQEADEEVLTILDLYAKVYTDLLAIPVVKGRKTEKEKFAGGD----------- 184

Query: 450 GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAF 509
                                    Y    E  +  A GR  Q  T        SR    
Sbjct: 185 -------------------------YTTTVEAYI-SASGRAIQGATSHHLGQNFSRMFDI 218

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTT 559
            V  H E      + +  +G   R IG+MI     N  L L P    IQ ++  
Sbjct: 219 -VYEHPETKEKEYVFQNSWGITTRTIGVMIMVHADNQGLVLPPRVACIQVVIVP 271


>gi|320535524|ref|ZP_08035624.1| phosphoribulokinase / Uridine kinase family protein [Treponema
           phagedenis F0421]
 gi|320147585|gb|EFW39101.1| phosphoribulokinase / Uridine kinase family protein [Treponema
           phagedenis F0421]
          Length = 550

 Score =  109 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 48/212 (22%), Positives = 100/212 (47%), Gaps = 4/212 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           S+  + FP+   K F    +   +   +  ++ K    + +N ++  LS  +    S+E 
Sbjct: 2   SEFTIRFPNEQKKRFVQPISAGALLAYM-PNIDKTVYGMKVNNELVALSKTIDIRASVEP 60

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +         + R +   ++A A Q+++PE ++ +G  +   +YY  +        +  +
Sbjct: 61  VLKGTQEGSKIYRRTLCLLLAAASQALYPEQRLLVGHSLGYSYYYTLEGNNTEKI-DFKK 119

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE+KM+E++  D P   ++LS+E+A E+F++  +    ++L  I  K  + + + G++ D
Sbjct: 120 IEEKMRELVEADIPIQTRWLSYEEAIEMFQNSNQPDTYKLLSYIS-KPKILINKLGDFHD 178

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSN 213
           L   P +  TG+VK F  +    G   R  S 
Sbjct: 179 LFFQPVMDRTGEVKVFELMPYGEGFLLRFPST 210


>gi|195494429|ref|XP_002094836.1| GE19994 [Drosophila yakuba]
 gi|194180937|gb|EDW94548.1| GE19994 [Drosophila yakuba]
          Length = 333

 Score =  109 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 56/232 (24%), Positives = 102/232 (43%), Gaps = 21/232 (9%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKV-CDLSDPVRE-GSIEIITPEDPRSL---AVIRH 75
           +T  + A+ +S    K++    I+G V  D+  P++E  +++++                
Sbjct: 78  STPFNCAQHLSEGHCKRSALALIDGSVPWDMHRPLQESCTLQLLNFHVSEPHVVNKAFWR 137

Query: 76  SCAHIMAEAVQSIW-PEVQVAI----GPIIEDG-FYYDF---DKEQPFSSDELAQIEKKM 126
           +C+ ++  A+   + PE  + +    GP I+ G F +D     +      ++   I  +M
Sbjct: 138 TCSFMLGAALNRAFKPEANLQLHSFPGPNIKSGSFVHDIVLQTQNWEPKKEDRRAISAEM 197

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN--VTLYRQGEWFDLCR 184
            ++ A+D    +  +  + A+E+F+  K  YK E L SI  + N  VTLYR G+  D+ R
Sbjct: 198 VKLAAQDLRIERLDVQQDLAQEMFKDSK--YKSEQLPSIAQQTNGRVTLYRLGDHIDISR 255

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           GP V ST  +    K +  A      +       RI G A  T  +L    +
Sbjct: 256 GPMVASTSFLG---KCVISAAHKVAEEGPAGAFYRIQGVALPTGFQLNHVAF 304


>gi|255284144|ref|ZP_05348699.1| phosphoribulokinase family protein [Bryantella formatexigens DSM
           14469]
 gi|255265318|gb|EET58523.1| phosphoribulokinase family protein [Bryantella formatexigens DSM
           14469]
          Length = 554

 Score =  109 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 44/201 (21%), Positives = 84/201 (41%), Gaps = 6/201 (2%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
           M   I + F +G  K++    +    A+   +  A   V   ++GK+ +L+  +  G  I
Sbjct: 1   MNDQITV-FINGEEKSYMDGTSYLAAAKEYQKEYAHDIVLATVDGKLKELNKRMGNGEHI 59

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE---VQVAIGPIIEDGFYYDFDKEQPFSS 116
             +T  DP   +  R S   ++ +A++ +  E    +V +   + +G Y     ++  ++
Sbjct: 60  TFVTVADPMGFSAYRRSVLLLLLKAIRQVGGEEQADRVWVHFAVSEGVYITMRGQKSVTA 119

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
             L +++  M+E+  RD    K+ +  +KA  LF       K E L        V  Y  
Sbjct: 120 KFLHEVKTAMKELAKRDIVISKEAVDTDKAIALFGRLGMEDK-EKLFHYRMASKVNTYSL 178

Query: 177 GEWFDLCRGPHVRSTGQVKKF 197
             + D   G  V  +G +K F
Sbjct: 179 DGFCDYFYGYMVPGSGYLKYF 199


>gi|315185841|gb|EFU19606.1| prolyl-tRNA synthetase [Spirochaeta thermophila DSM 6578]
          Length = 589

 Score =  109 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 42/216 (19%), Positives = 78/216 (36%), Gaps = 11/216 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q           E E   +  L +   +  +   G G+  +   G ++F  L   +  +
Sbjct: 28  SQLFPHTLRTLPREHEGTPYGLLVKGGYVRGL---GQGLYSFLPLGLRVFYKLKRLIAGE 84

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +K    +E+  P V    LW++SG       ++          +  R   + P +    V
Sbjct: 85  MKRLGGQEVLVPLVNPMELWERSGRDLLVGGDLVKFSD-----RAGRQMVISPTHEEAMV 139

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    ++SYR LPV L +F + YR+E      GL+R R F   D + F       N   
Sbjct: 140 ELLRQSMRSYRMLPVFLYQFQTKYRDEER-VRIGLLRSREFIMKDGYSFHRTYADLNNFF 198

Query: 406 -KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            K+ +    +++      I+ +          S   
Sbjct: 199 PKVFHAYERVFRTCNVPYIVAEAGVGYMGGERSYEF 234



 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 63/167 (37%), Gaps = 11/167 (6%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN----FK 543
           R  + G I  +      R    + +    + HP M    +   + R I +++E       
Sbjct: 425 RAVEIGHIFKLGDFYSQRMGLSFFDERGREIHPYMGSYGI--GMGRLISMIVETNSDEHG 482

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
              P  ++P    + +I +S +   +++  L ++       D R+ +   K  +  +  I
Sbjct: 483 IVWPPQVAPFMVFLMSIGNS-LSMKRKLEALAEALGDRALLDDRHLSPGRKFLDADLLGI 541

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVS---LLDAIPILTKESLP 647
           P  I+   +   E  + ++   +    K++   + D +  L ++  P
Sbjct: 542 PYRILLTQELLEEGKVEVKERTTGKVWKLAYQRVEDFVHYLEEQYGP 588


>gi|188994239|ref|YP_001928491.1| phosphoribulose/uridine kinase [Porphyromonas gingivalis ATCC
           33277]
 gi|188593919|dbj|BAG32894.1| phosphoribulose/uridine kinase [Porphyromonas gingivalis ATCC
           33277]
          Length = 554

 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 43/232 (18%), Positives = 81/232 (34%), Gaps = 2/232 (0%)

Query: 16  NFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPEDPRSLAVIR 74
            FP   +   VAE     L  +     +N    DL   + E   +   +  D   +    
Sbjct: 16  EFPHGISLERVAEYFQDDLGFRPFNAQVNHCTRDLGFRLYEPSDVLFASFSDESGMRTYV 75

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDS 134
            + + I+++AV  I P  ++ I   + +G+Y         +  E+ +I+++M+ +I  D 
Sbjct: 76  RTLSFILSKAVADILPGSKLFIEHSLSNGYYCQIKNAHMITPGEIVRIKERMESLIVADI 135

Query: 135 PFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQV 194
           PF       E+   +F S     K ++LE+         Y    + D   G    STG +
Sbjct: 136 PFRAHCERTEEVAAMFRSMGYEDKADLLET-RGMPYSRYYDLDGYPDYYYGSLAPSTGYI 194

Query: 195 KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDH 246
             F     + G   R                   +++      L +  +  H
Sbjct: 195 GLFGLEPYLDGVLLRIPRRDKPEELAPFVPQPMMRQVFADHDRLLDILQVTH 246


>gi|307183202|gb|EFN70111.1| 39S ribosomal protein L39, mitochondrial [Camponotus floridanus]
          Length = 353

 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 50/238 (21%), Positives = 98/238 (41%), Gaps = 22/238 (9%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRS---LAVIRHS 76
           +T  D A  IS ++AK A    ++G+V D+  P   +  +E++T + P++         +
Sbjct: 97  STPYDCARHISENVAKTAAIALVDGRVWDMHRPFTGKCELELVTMQSPKTGVVNYAFWRT 156

Query: 77  CAHIMAEAVQSIWPEV-----QVAIGPIIEDG-FYYDFDKEQP---FSSDELAQIEKKMQ 127
           C+ I+     S + +           P I  G F YD   + P    +  EL  +     
Sbjct: 157 CSMILGAVADSAFKDHVDVHLHSFPVPQIHSGSFIYDVFIDLPNWRPTDSELRAMSALFI 216

Query: 128 EIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESI---PAKENVTLYRQGEWFDLCR 184
           ++  ++    +  +  + A  +   +   +K + + +I      + VTLYR G++ D+ +
Sbjct: 217 KLTNQELLLERLEVPCDVALHM--FQDNPFKSQQIPNIAKNSDNDRVTLYRLGDYVDISK 274

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           GP V S+G + +      V+  +   D     L R  G A      L  + + + E  
Sbjct: 275 GPMVSSSGLMGRV----TVSAVHKLADGPVDGLYRFQGIALPKGILLNHFAFSILEKR 328


>gi|169836892|ref|ZP_02870080.1| prolyl-tRNA synthetase [candidate division TM7 single-cell isolate
           TM7a]
          Length = 568

 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 39/201 (19%), Positives = 86/201 (42%), Gaps = 11/201 (5%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDL----FHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           + +   F + ++     ++++   L      IA++ +GV  +   G K+ + + S +R +
Sbjct: 1   MRRTELFTKTNKTSPSGEVSKNAQLLIRAGFIAKEMAGVYAFLPLGLKVVENIKSIVREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +     +E+    +  + +W+++  W+    +++        +KD     L   +    V
Sbjct: 61  MNKIGSKELLMTNLQRKEVWEKTNRWNDNIVDIWFKT----KLKDDTEVGLGWSHEEPIV 116

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNEC 404
            +    ++SY++LPV + +F +  RNE   +  G+MR R F   D + F  TKE +    
Sbjct: 117 NMMRQFIRSYKDLPVSVYQFQNKMRNELR-AKSGIMRGREFVMKDMYSFHATKEDLEEYY 175

Query: 405 LKIHNLIISIYKDFGFEKIMV 425
            K+       Y+  G      
Sbjct: 176 HKVMEAYEQCYRRLGVGDDTY 196



 Score = 57.5 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 24/162 (14%), Positives = 60/162 (37%), Gaps = 8/162 (4%)

Query: 488 GRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE----NF 542
            R  + G I             +Y +S  E+    +    +   I R +G++ E      
Sbjct: 409 KRTAEVGNIFNFGSQKTDEMELYYTDSKGEQKSIFLGSYGI--GITRIMGVIAEKLSDEK 466

Query: 543 KGNLPLWLSPIQAIVTTITS-SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
               P+ ++P +  + +I S  A++ A  +  L+K   + +  D R+     K  +  + 
Sbjct: 467 GLVWPVDIAPAKVYLVSIGSGDAIKEADRLYELMKIKGIEVIYDDRDVRPGEKFTDGELM 526

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            IP ++   D+     +   +   +     ++  +    +++
Sbjct: 527 GIPHMVTVSDRLIKTGNFEHKLRSTGEVSLLTQDELFDTISQ 568


>gi|307717987|ref|YP_003873519.1| prolyl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
 gi|306531712|gb|ADN01246.1| prolyl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
          Length = 577

 Score =  108 bits (270), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 42/216 (19%), Positives = 79/216 (36%), Gaps = 11/216 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           +Q           E E   +  L +   +  +   G G+  +   G ++F  L   +  +
Sbjct: 16  SQLFPHTLRTLPREHEGTPYGLLVKGGYVRGL---GQGLYSFLPLGLRVFYKLKRLIAGE 72

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +K    +E+  P V    LW++SG       ++        + +  R   + P +    V
Sbjct: 73  MKRLGGQEVLAPLVNPMELWERSGRDLLVGGDLVKF-----SDRAGRQMVISPTHEEAMV 127

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +    ++SYR LPV L +F + YR+E      GL+R R F   D + F       N   
Sbjct: 128 ELLRQSMRSYRMLPVFLYQFQTKYRDEER-VRIGLLRSREFIMKDGYSFHRTYADLNNFF 186

Query: 406 -KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            K+ +    +++      I+ +          S   
Sbjct: 187 PKVFHAYERVFRTCNVPYIVAEAGVGYMGGERSYEF 222



 Score = 75.2 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 64/167 (38%), Gaps = 11/167 (6%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN----FK 543
           R  + G I  +      R    +V+    + HP M    +   + R I +++E       
Sbjct: 413 RAVEIGHIFKLGDFYSQRMGLSFVDERGREIHPYMGSYGI--GMGRLISMIVETNSDEHG 470

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
              P  ++P    + +I +S +   +++  L ++       D R+ +   K  +  +  I
Sbjct: 471 IVWPPQVAPFMVFLMSIGNS-LSMKRKVEALAEALGDRALLDDRHLSPGRKFLDADLLGI 529

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVS---LLDAIPILTKESLP 647
           P  I+   +   E  + ++   +    K++   + D +  L ++  P
Sbjct: 530 PYRILLTQELLEEGKVEVKERSTGKVWKLAYQRVEDFVHYLEEQYGP 576


>gi|195016104|ref|XP_001984341.1| GH15069 [Drosophila grimshawi]
 gi|193897823|gb|EDV96689.1| GH15069 [Drosophila grimshawi]
          Length = 461

 Score =  108 bits (270), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 69/366 (18%), Positives = 130/366 (35%), Gaps = 30/366 (8%)

Query: 269 HRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
                +     I+ ++R +++   ++I+ P +    LW+++G  +   +  + V+     
Sbjct: 50  MPIAQRAVDKCINLVQRNMQEAGGQKISMPVLTPTQLWKKTGRLEGDISEFYMVRD---- 105

Query: 328 IKDLRTFALKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
            +  + F + P +     A+       SYR+LP+RL + G  +R+E      GLMR + F
Sbjct: 106 -RSGKQFLMSPTHEEAVTAMLATTAPISYRQLPLRLYQIGPKFRDELKSRF-GLMRAKEF 163

Query: 387 TQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
              D + F  TKE       +I N     ++      + V+ +T       S      + 
Sbjct: 164 LMKDMYTFDVTKEAAEKTYARISNTYAQFFRQLEVPFVTVEAATGIMGGSLSHEYHYIS- 222

Query: 446 NIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE-YILKDAIGRDWQCGTIQVDFNLPS 504
            + +  L    N      N  V     A   P  +   L    G +    T  +      
Sbjct: 223 PVGEDTLLKCNNCGYAG-NVEVFGNTSANTCPSCQGSQLIPVRGVEV-AHTFLLGDKYSK 280

Query: 505 RFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE----NFKGNLPLWLSPIQAIVTT 559
              A ++N+  +   P  +    +G  I R I   +E      +   P  L+P    +  
Sbjct: 281 PLGATFLNTSGK---PETLVMGCYGIGITRVIAAALEVLSTEQELRWPKLLAPYDVCLIG 337

Query: 560 ITSSAVEY--AQEIANLLKSHH---LSIE---TDFRNE-TINYKIREHSIKKIPIIIICG 610
               + E   A+ +   L          E    D R E TI  ++ +      P+ I+ G
Sbjct: 338 PKQGSKEQVPAEGVEIELLQQLTQICGAEELLHDDRKELTIGKRLFDAKRLGHPLTIVVG 397

Query: 611 DKEASE 616
            K   +
Sbjct: 398 TKAVQK 403


>gi|291520416|emb|CBK75637.1| Uridine kinase [Butyrivibrio fibrisolvens 16/4]
          Length = 554

 Score =  108 bits (270), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 37/225 (16%), Positives = 81/225 (36%), Gaps = 5/225 (2%)

Query: 11  DGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPEDPRS 69
           +G+ +++       ++AE          V     G + +LS  V     ++ +T  D   
Sbjct: 7   NGNEESYEEGTRLVEIAEKHQSEYKDDIVLAKYKGSLTELSKTVTGVADLQFLTTADKDG 66

Query: 70  LAVIRHSCAHIMAEAVQSIWP---EVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKM 126
               R S   ++  A+  ++P      + +   +  G +   +     + ++L +++K M
Sbjct: 67  RRAYRRSVVFLLQRALMDVYPLPANPYLRVEHSLGQGDFCTLEGVGEVTEEDLIELKKVM 126

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGP 186
            +++ +D P  K  +   +A+++F S     K ++L       N+ +Y      D   G 
Sbjct: 127 LDLVEQDVPLKKYSIKTTQAKDMFHSFNMKDKEQLL-KYRTSSNINVYDLDGCIDYFYGY 185

Query: 187 HVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQEL 231
            V ST  +K F  +    G                  A   +   
Sbjct: 186 MVPSTRYLKYFDLIKFEHGFMLMYPDGSLPGIDTRKVAEFKKPMK 230


>gi|330444263|ref|YP_004377249.1| prolyl-tRNA synthetase [Chlamydophila pecorum E58]
 gi|328807373|gb|AEB41546.1| prolyl-tRNA synthetase [Chlamydophila pecorum E58]
          Length = 577

 Score =  108 bits (270), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 40/218 (18%), Positives = 83/218 (38%), Gaps = 9/218 (4%)

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR 284
             T Q   + L   ++     +  L +   L+ I   G G+  +    W++    +  +R
Sbjct: 1   MRTSQLFYRTLKHTKKDAVLSNELLEKAGYLWRI---GKGIYTYTPLLWRVVLKFMEIIR 57

Query: 285 RKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPG 343
            ++     +E+  P +     W Q+G W ++ +        D   ++ +   L P +   
Sbjct: 58  EELNAIGGQELLLPILHPAEYWLQTGRWHAFVSENLLYHLID---REGKEHCLAPTHEEI 114

Query: 344 HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFN 402
             A+    L   ++LP+ L +    +R+E      GL+R R    +D++ F  + EQM  
Sbjct: 115 VSALLAQWLSGKKQLPLHLYQMAPKFRDEIRPRF-GLIRSRELLMEDSYTFSDSPEQMDE 173

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           +  K+      I+   G    +V        +  S+  
Sbjct: 174 QYQKLRMAYSKIFDRLGLAYAIVNADGGKIGKGKSEEF 211



 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/174 (16%), Positives = 57/174 (32%), Gaps = 11/174 (6%)

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI-- 537
           +   K   G +       +       F A + +    K  P  +     G I R +    
Sbjct: 399 DVPYKIFQGIEV-AHIFNLGIRYTESFQATFQDEEG-KERPCWMGTYGIG-IGRTLAACV 455

Query: 538 --MIENFKGNLPLWLSPIQAIVTTITSS--AVEYAQEIANLLKSHHLSIETDFRNETINY 593
             + ++     P  ++P    +        + + A  +   L+        D R+E + +
Sbjct: 456 EQLSDSRGIVWPEIIAPFSISILYNGGDTPSEQVAYSLYQDLQQQGCEPLLDDRDERLGF 515

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLP 647
           K+++  +  IP  +I G    +   + I    S     V   + I   + E LP
Sbjct: 516 KLKDSDLIGIPYKLIIGKAYHASGILEIESR-SGEKFSVPPENFISW-SHEHLP 567


>gi|321478075|gb|EFX89033.1| hypothetical protein DAPPUDRAFT_304699 [Daphnia pulex]
          Length = 326

 Score =  108 bits (270), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 45/236 (19%), Positives = 97/236 (41%), Gaps = 30/236 (12%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSL------AVI 73
           +T  + A+ IS  L K +V   +NG++ DL  P+  + ++++++ +              
Sbjct: 80  STPYNCAQHISEHLMKNSVVAEVNGEIWDLHRPIPSDCTLKLLSMKPENQHQASLVNKTF 139

Query: 74  RHSCAHIMAEAVQSIWPE------VQVAIGPIIEDGFYYDFDK---EQPFSSDELAQIEK 124
             SC++++   V+  + +             +    F YD      +   S ++  QI  
Sbjct: 140 WRSCSYLLGAVVEGSFQDDISVTLHSFPPANVRSGSFVYDVQLSLDDWVPSLNDFRQIAA 199

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESI----PAKENVTLYRQGEWF 180
             Q+ + ++  F +  +    A ++FE    A+K + +  I     +   VT+YR G+  
Sbjct: 200 TFQKFVRQNHTFQRLDIDSSVALKMFE--DNAFKADQIPHIATKSSSGNTVTVYRCGDHI 257

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           D+ RGP + ST  V +      +A  +         + R  G A  ++  +  + +
Sbjct: 258 DISRGPMIASTSLVGR----CSIAAVHRLDSR----IYRFQGVALPSEIYINHFAF 305


>gi|217966477|ref|YP_002351983.1| phosphoribulokinase/uridine kinase [Dictyoglomus turgidum DSM 6724]
 gi|217335576|gb|ACK41369.1| phosphoribulokinase/uridine kinase [Dictyoglomus turgidum DSM 6724]
          Length = 555

 Score =  108 bits (270), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 48/243 (19%), Positives = 103/243 (42%), Gaps = 11/243 (4%)

Query: 4   DIKLTFPDGSIK-NFPVHATGSDVAESISRSLAK------KAVAVAINGKVCDLSDPVRE 56
            I + F  G+I+       +  +V  + S  + K        VAV ++G +  L+  V +
Sbjct: 1   MINIEF-RGAIRTEIEKPKSLIEVLNAYSEIVDKLLNPGEIPVAVKVDGNIETLNYIVED 59

Query: 57  GS-IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFS 115
            + ++II         ++  S   ++  AV  + P+ +V +        Y  F +     
Sbjct: 60  DTKLDIIGSRSNIGRRILERSYIFLLNFAVSLVMPDQRVLVEHSYHKSLYGRF-RNYAPK 118

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           ++++ +I+++M EI+ ++ P  K+ +S E+A ++FE + E  K+ +++ IP KE + LY 
Sbjct: 119 AEDIERIKERMMEIVEQNIPIQKKLVSKEEALKIFEERNEEDKIRLIKYIPFKE-IPLYY 177

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
             + ++    P V ST  +K F   +   G       ++ +             +     
Sbjct: 178 IDDHYEYSFLPLVPSTSFLKTFDLKLYQPGFILILPDDKDIQKLSEFREIVKLFQAFYEY 237

Query: 236 YFL 238
              
Sbjct: 238 KNW 240


>gi|239616791|ref|YP_002940113.1| Phosphoribulokinase / Uridine kinase family protein [Kosmotoga
           olearia TBF 19.5.1]
 gi|239505622|gb|ACR79109.1| Phosphoribulokinase / Uridine kinase family protein [Kosmotoga
           olearia TBF 19.5.1]
          Length = 554

 Score =  108 bits (269), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 39/197 (19%), Positives = 84/197 (42%), Gaps = 4/197 (2%)

Query: 3   SDIKLTF-PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIE 60
            +IK+      +    P      ++AE   +      +A  +   + +L   +  +  I+
Sbjct: 2   ENIKVKINKLNTEIEVPKGIAFYELAERFQKHYDSPIMAARMENSLVELRRKLEKDAVID 61

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELA 120
            I   +   + +       I+  +V+ +  +V++ +   +  G   +   +     + L 
Sbjct: 62  FIDLSNIDGIRIYTRGILFILFMSVREVLGKVKLYVHHSLGSGLVCEVVGKNVGKEE-LE 120

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +IE KM++I+ +D PF K+ +   +A ELF+  ++  K  +L     K  V +Y+   +F
Sbjct: 121 KIESKMRDIVEQDLPFSKETIDKFEAIELFKLDQQMEKS-LLFKYRKKSTVNIYKCDNYF 179

Query: 181 DLCRGPHVRSTGQVKKF 197
           +   G    STG +K F
Sbjct: 180 NYFYGYMPMSTGCLKHF 196


>gi|157363380|ref|YP_001470147.1| phosphoribulokinase/uridine kinase [Thermotoga lettingae TMO]
 gi|157313984|gb|ABV33083.1| phosphoribulokinase/uridine kinase [Thermotoga lettingae TMO]
          Length = 555

 Score =  108 bits (269), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 38/194 (19%), Positives = 78/194 (40%), Gaps = 5/194 (2%)

Query: 17  FPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIRH 75
            P      D     S+      VA  I+  + +L+  +  G ++  I       L + + 
Sbjct: 15  VPEGTKLIDYVSKFSKYHQTAIVAAKIDNSIVELNKKLDRGGNVSFIDLTTLDGLRIYQR 74

Query: 76  SCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE---QPFSSDELAQIEKKMQEIIAR 132
               ++   ++ ++ + Q+ +   + +  Y +  K    + FS +E+ +I+ KM E++  
Sbjct: 75  GVLFLLHMVLKEMYQDYQLWVLHSVGNALYCELRKNGYRKEFSEEEIVKIKSKMSELVKM 134

Query: 133 DSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTG 192
           D  F K     E A ++F  + +A ++  L     K+ + LY+    +D   G    STG
Sbjct: 135 DITFEKHEFYKEDAFKIFTEQGDADRIR-LFKFRKKKTIKLYKCLNHYDYYYGYMPPSTG 193

Query: 193 QVKKFFKLMKVAGA 206
            +  F       G 
Sbjct: 194 YLTHFDLQKDGEGF 207


>gi|194749304|ref|XP_001957079.1| GF10245 [Drosophila ananassae]
 gi|190624361|gb|EDV39885.1| GF10245 [Drosophila ananassae]
          Length = 458

 Score =  108 bits (269), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 73/411 (17%), Positives = 146/411 (35%), Gaps = 31/411 (7%)

Query: 253 MDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHW 311
            DL  I    +G         +    LI  ++  ++    ++I+ P +    LW+++G  
Sbjct: 34  TDLGLIKSGSNGTYQIMPIAQRSLDKLIDLVQSNMQLAGGQKISLPILTPSALWKKTGRL 93

Query: 312 DSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYR 370
           +   +  + V+      +  + F + P +     A+       SYR+LP+RL + G  +R
Sbjct: 94  EGDISEFYMVRD-----RSGKQFLMSPTHEEAITAMLATTSPISYRQLPLRLYQIGPKFR 148

Query: 371 NEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH-NLIISIYKDFGFEKIMVKLST 429
           +E      GLMR + F   D + F   E+   E           +++      + V  +T
Sbjct: 149 DELKSRF-GLMRAKEFLMKDMYSFDVSEETARESYSAVSEAYDRLFQQLEVPFVKVNAAT 207

Query: 430 RPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGR 489
                  S      +  + +  L    +      N+ VL        P  +    + +  
Sbjct: 208 GMMGGSLSHEYHYVST-VGEDSLVQCTSCGFAG-NSEVLTTPEN--CPSCQSSNLNEVRG 263

Query: 490 DWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF----KGN 545
                T  +     +   A ++N+  +    V++     G I R I   +E F    +  
Sbjct: 264 VEIAHTFLLGDKYSTPLGATFLNTSGKPQS-VIMGCYGIG-ITRVIAAALEVFSSEQELQ 321

Query: 546 LPLWLSPIQAIVT--TITSSAVEYAQEIANLL-KSHHLSI------ETDFRNETINYKIR 596
            P  L+P    +      S   + A+ I N L  S             D ++ TI  ++ 
Sbjct: 322 WPKLLAPFDVCLIGPKQGSKEQQPAEVIENELLNSVGQLCGPQELLHDDRKDLTIGKRLL 381

Query: 597 EHSIKKIPIIIICGDKEASERS--IGIRRFGSTTTQKVSLLDAIPILTKES 645
           E      P+ I+ G K   + S  + +  F      ++ L + + ++ + S
Sbjct: 382 EAKRLGHPLTIVVGGKAIQQDSPKLEV-HFNGGDKLELDLSETLKLVAEHS 431


>gi|255348758|ref|ZP_05380765.1| prolyl-tRNA synthetase [Chlamydia trachomatis 70]
 gi|255503298|ref|ZP_05381688.1| prolyl-tRNA synthetase [Chlamydia trachomatis 70s]
 gi|255506977|ref|ZP_05382616.1| prolyl-tRNA synthetase [Chlamydia trachomatis D(s)2923]
 gi|407685|gb|AAA23161.1| aminoacyl-tRNA synthetase [Chlamydia trachomatis]
 gi|289525435|emb|CBJ14912.1| prolyl-tRNA synthetase [Chlamydia trachomatis Sweden2]
 gi|296434987|gb|ADH17165.1| prolyl-tRNA synthetase [Chlamydia trachomatis E/150]
 gi|296438707|gb|ADH20860.1| prolyl-tRNA synthetase [Chlamydia trachomatis E/11023]
 gi|745528|prf||2016314B AA-tRNA synthetase
          Length = 581

 Score =  108 bits (269), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 81/213 (38%), Gaps = 9/213 (4%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
                   +E+    +  L +   LF  ++   G+  +     ++   +   +R ++   
Sbjct: 8   YRTSKNVNKEASVLSYELLQKAGYLFKTSK---GIYSYTPLFQRVILKMTEIIREELNAI 64

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
             +E+  P +    LW+++G W ++ +        D   ++     L P +         
Sbjct: 65  GGQEVCLPLLQPAELWEKTGRWKAFLSEKLLYVLKD---RENEAMCLAPTHEEVVSEFVA 121

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIH 408
             L    +LP+ L + G+ +R+E      GLMR + F  +D++ F  + EQM  +  K+ 
Sbjct: 122 QWLTGREQLPIHLYQIGTKFRDEIRPRF-GLMRAKEFLMEDSYTFSDSPEQMEEQYAKLR 180

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALW 441
                I+     + ++V        +  S+   
Sbjct: 181 LAYQRIFDRLNLKYVIVAADGGKIGKGKSEEFH 213



 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 58/157 (36%), Gaps = 9/157 (5%)

Query: 491 WQCGTIQVDFNLPSRF-NAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN--- 545
           +Q   +   FNL +R+  +F V    +     +     +G  + R +   IE    N   
Sbjct: 406 FQGVEVAHIFNLGTRYTESFSVGFQDKNGDKQLCWMGTYGIGVGRTLAACIEQLADNKGL 465

Query: 546 -LPLWLSPIQAIVT--TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
             PL ++P    +      +     A ++   L +       D RNE + +K+++  +  
Sbjct: 466 VWPLAVAPFSITILYNGGDTEGEATALQLYQSLNTEGFEPLLDDRNERLGFKLKDSDLLG 525

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
           IP  +I G    S   + I    S     VS  + + 
Sbjct: 526 IPYKLIIGKSFQSTGLLEIESR-SGEKCNVSPENLLD 561


>gi|218671001|ref|ZP_03520672.1| threonyl-tRNA synthetase [Rhizobium etli GR56]
          Length = 98

 Score =  108 bits (269), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 41/74 (55%), Positives = 54/74 (72%)

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
            L++ETDFRNE INYKIREHS+ K+P+II+CG KEA ER++ IRR GS     + L  A+
Sbjct: 15  GLNVETDFRNEKINYKIREHSVTKVPVIIVCGRKEAEERTVNIRRLGSQDQVSMGLDAAV 74

Query: 639 PILTKESLPPDCQK 652
             LT E+ PPD ++
Sbjct: 75  ESLTLEATPPDIRR 88


>gi|213863101|ref|ZP_03386356.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
          Length = 86

 Score =  108 bits (269), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 46/85 (54%), Positives = 60/85 (70%)

Query: 491 WQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL 550
           WQCGT+Q+DF+LPSR +A YV   +E+  PVMIHRA+ GS+ERFIGI+ E F G  P WL
Sbjct: 1   WQCGTVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAGFFPTWL 60

Query: 551 SPIQAIVTTITSSAVEYAQEIANLL 575
           +P+Q ++  IT S  EY  E+   L
Sbjct: 61  APVQVVIMNITDSQSEYVNELTQKL 85


>gi|225575016|ref|ZP_03783626.1| hypothetical protein RUMHYD_03096 [Blautia hydrogenotrophica DSM
           10507]
 gi|225037767|gb|EEG48013.1| hypothetical protein RUMHYD_03096 [Blautia hydrogenotrophica DSM
           10507]
          Length = 555

 Score =  108 bits (269), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 49/243 (20%), Positives = 93/243 (38%), Gaps = 6/243 (2%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEI 61
             +++T  D  ++ +P      D+     R      + V  NGK+ +L   + R+  ++ 
Sbjct: 4   KMVQVTVGD-EVREYPDGICYVDIVREYQREYQDTIMLVMANGKLRELHKHLHRDCELKF 62

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPE---VQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           +T  D       + S + I+ +AV  I  +    QV +   I  G+YY          + 
Sbjct: 63  VTVADEAGHKTYKRSASMILTKAVYDIAGKENVDQVMLHFSIGSGYYYTVKGRVKIDEEF 122

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           LAQ+ ++M+E++    PF K+ +  + A E+F S++   KV  L        V LY   +
Sbjct: 123 LAQVRERMRELVNARIPFYKRSVRTDDAVEIFRSQRMMDKVS-LFEFRRVSRVNLYSLED 181

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           + D   G     TG +  F  ++   G   +              A     ++       
Sbjct: 182 YQDYYYGFMAYDTGYIPYFDLVLYDHGFVLQLPERSAPTKVPLFVASPKIFQVQMGTEEW 241

Query: 239 EES 241
            + 
Sbjct: 242 GDM 244


>gi|153813731|ref|ZP_01966399.1| hypothetical protein RUMOBE_04164 [Ruminococcus obeum ATCC 29174]
 gi|149830171|gb|EDM85264.1| hypothetical protein RUMOBE_04164 [Ruminococcus obeum ATCC 29174]
          Length = 556

 Score =  108 bits (269), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 40/218 (18%), Positives = 87/218 (39%), Gaps = 7/218 (3%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKK-AVAVAINGKVCDLSDPVR-EGSIE 60
             +K+T  DG    + +  T  ++ +     +A+   + V  +GK+ +L   ++ + ++E
Sbjct: 4   EMVKVTI-DGKEHEYAIGTTYREIVDEYQEEVAEAPVILVMADGKLRELQKKLKGDCTLE 62

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQ---VAIGPIIEDGFYYDFDKEQPFSSD 117
            +T +D       + +   ++  A+  +  +     V I   + +G+Y+    +      
Sbjct: 63  FVTTKDHIGFETYKRTVCLVLLRAIYDVAGKENIEKVMIHYSVGNGYYFTMAGKAVLDQH 122

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
            L  ++ +MQE+    +P  K+ ++ + A  LF   +   K E L        V +Y  G
Sbjct: 123 FLDNVKTRMQELADMCTPIGKRSVNTDDAVSLFHHHRMYDK-EKLFRFRRVSKVNIYNIG 181

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRP 215
            + D   G      G VK F   +   G      + + 
Sbjct: 182 YYEDYFYGYMADHAGYVKYFDLKLYDEGFVLELPTRKN 219


>gi|225377425|ref|ZP_03754646.1| hypothetical protein ROSEINA2194_03073 [Roseburia inulinivorans DSM
           16841]
 gi|225210771|gb|EEG93125.1| hypothetical protein ROSEINA2194_03073 [Roseburia inulinivorans DSM
           16841]
          Length = 575

 Score =  108 bits (269), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 46/245 (18%), Positives = 93/245 (37%), Gaps = 23/245 (9%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-D 290
            ++     + +   H  + R   + ++A        +     +I + +   +R ++   D
Sbjct: 9   DRFKERPADCQVDSHALMIRGGYMKNVA--NGIYSSYMPL-RRITRKIEQIIREEMDAID 65

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH 350
            +E+  P V+   LWQ+SG +DS    +        T ++     L   +    V +   
Sbjct: 66  GQEVQFPVVMPASLWQESGRYDSIGKELLRF-----TDRNGAPMVLGMTHEEAAVQLVRE 120

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHN 409
             +SY + P  + +  + +R+E      GL+RVR FT  DA+ F T  E +     K H 
Sbjct: 121 YGQSYAKYPFMIYQIQTKFRDEARPR-AGLIRVREFTMKDAYSFHTSQEDLEQYYDKCHK 179

Query: 410 LIISIYKDFGFEKIMVKLSTRPEKR------------VGSDALWDDAENIMKGVLDTIKN 457
               IY   G  +++   S                  +G D++    E   +  ++  +N
Sbjct: 180 AYERIYARAGIPEVVSVKSDSGMMGGNVSHEFMLLTPIGEDSIVICNECDYRANMEAAEN 239

Query: 458 SSQDR 462
             ++ 
Sbjct: 240 IVENE 244



 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/175 (16%), Positives = 63/175 (36%), Gaps = 17/175 (9%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFK 543
            I R  + G I Q+        N  YV+      +P+M    +   + R    + E +  
Sbjct: 399 TISRGIEVGNIFQLGTKYTKTMNMTYVDKDGISKNPIMGCYGI--GVGRMAASICEAHHD 456

Query: 544 GNLPLWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
              P+W    +P Q  +  +        E A  +   L++  + +  D R+ +   K  +
Sbjct: 457 DYGPIWPMSIAPWQVHICAMNLDKEGVREVADTLYENLQNAGVEVIYDDRSVSAGNKFSD 516

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL-------DAIPILTKES 645
             +  +P+ ++   +   E  + +     +  +KV +        D +  + KE 
Sbjct: 517 ADLLGVPVRVVVSPRNLKESVVEVSTRDKSLMEKVPVENAEQYVKDLVEKMKKEC 571


>gi|291400916|ref|XP_002716716.1| PREDICTED: mitochondrial ribosomal protein L39 [Oryctolagus
           cuniculus]
          Length = 744

 Score =  107 bits (268), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 45/224 (20%), Positives = 92/224 (41%), Gaps = 24/224 (10%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPEDPRSLAV---IRHS 76
           +T    A  +S    +K++   ++G+  D+  P+ +   IE +T +D     V      S
Sbjct: 213 STPYSCAMHLSEWYCRKSILALVDGQPWDMYKPLTKSCEIEFLTFKDRDPGEVNKAYWRS 272

Query: 77  CAHIMAEAVQSIWPEVQV------AIGPIIEDGFYYDFDKEQP-----FSSDELAQIEKK 125
           CA +M   ++  + +  V         P+I   F YD   ++       + + L    K 
Sbjct: 273 CAMMMGCVIERAFKDEYVVSLVGAPEVPVIAGAFCYDVVLDKKLDEWMPTKENLRSFTKD 332

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN---VTLYRQGEWFDL 182
           +  +I +D PF    +  + A E+   +   YK++ +E   ++     V L+R G++ D+
Sbjct: 333 VHALIYKDLPFETLEVEAKVALEI--FQHNKYKIDFIEEKASQNPERIVKLHRIGDFIDV 390

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWN 226
             GP +  TG         +V+  +    +   ++ R  G +  
Sbjct: 391 SEGPLIPRTG----ICFQYEVSAVHNLHPTQPSLVRRFQGLSLP 430


>gi|109493924|ref|XP_001069799.1| PREDICTED: mitochondrial ribosomal protein L39 [Rattus norvegicus]
 gi|149059737|gb|EDM10620.1| rCG58784, isoform CRA_a [Rattus norvegicus]
          Length = 336

 Score =  107 bits (268), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 49/224 (21%), Positives = 93/224 (41%), Gaps = 24/224 (10%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPEDPRSLAV---IRHS 76
           +T    A  +S    KK++   ++G+  D+  P+ +   I+ +T +DP    V      S
Sbjct: 83  STPYSCAMHLSEWYCKKSILALVDGQPWDMYKPLTKSCEIKFLTFKDPDPREVNKAYWRS 142

Query: 77  CAHIMAEAVQSIWPE------VQVAIGPIIEDGFYYDFDKEQP-----FSSDELAQIEKK 125
           CA +M   ++  + +      V+V   P+I   F YD   ++       + + L    K 
Sbjct: 143 CAMMMGCVLERAFKDDYVVSLVRVPDVPVIAGAFCYDVALDKRLDEWMPTKENLRSFTKD 202

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN---VTLYRQGEWFDL 182
              +I RD PF    +  + A E+   +   YKV+ +E   ++     V L+R G++ D+
Sbjct: 203 AHTLIYRDLPFETLEVDAKVALEI--FQHNKYKVDFIEEKASQNPERIVKLHRIGDFIDV 260

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWN 226
             GP +  T          +V+  +    S   ++ R  G +  
Sbjct: 261 SEGPLIPRTS----VCFQYEVSAVHNLPRSQPSLVRRFQGLSLP 300


>gi|222100805|ref|YP_002535373.1| Phosphoribulokinase/uridine kinase precursor [Thermotoga
           neapolitana DSM 4359]
 gi|221573195|gb|ACM24007.1| Phosphoribulokinase/uridine kinase precursor [Thermotoga
           neapolitana DSM 4359]
          Length = 404

 Score =  107 bits (268), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 42/209 (20%), Positives = 83/209 (39%), Gaps = 5/209 (2%)

Query: 11  DGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDL-SDPVREGSIEIITPEDPRS 69
           D              +AE   +    + +A  +N ++ +L   P R G ++ I   DP  
Sbjct: 20  DNREIVLEEGEDLFHLAEEYQKYFKYRILAAKVNNRIVELFRTPDRSGELDFIDLTDPDG 79

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF---DKEQPFSSDELAQIEKKM 126
           L + +     + + AV+ + P+ ++ +   +  G Y +    D+     S ++  I++KM
Sbjct: 80  LRIYQRGLVFLASLAVRKLNPDWRLKVLHSLGKGIYCEIYEKDRLIVPDSQQVISIKEKM 139

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGP 186
           +E++ +D P  K+    ++ARE+   +    K   L     K  V LY    ++    G 
Sbjct: 140 EELVQKDLPIEKRTFYKDEAREILLREGLE-KTVRLFKYRKKRTVKLYHCDGFWAYFYGY 198

Query: 187 HVRSTGQVKKFFKLMKVAGAYWRGDSNRP 215
              STG++  F       G        + 
Sbjct: 199 LPPSTGRINVFDVQPYNQGIVLVHPDPKT 227


>gi|194871047|ref|XP_001972775.1| GG13700 [Drosophila erecta]
 gi|190654558|gb|EDV51801.1| GG13700 [Drosophila erecta]
          Length = 333

 Score =  107 bits (268), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 56/232 (24%), Positives = 103/232 (44%), Gaps = 21/232 (9%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKV-CDLSDPVRE-GSIEIITPEDPRSL---AVIRH 75
           +T  + A+ +S    K++    I+G V  D+  P++E  +++++                
Sbjct: 78  STPFNCAQHLSEGHCKRSALALIDGSVPWDMHRPLQESCTLQLLNFHVSEPHVVNKAFWR 137

Query: 76  SCAHIMAEAVQSIW-PEVQVAI----GPIIEDG-FYYDF---DKEQPFSSDELAQIEKKM 126
           +C+ ++  A+   + PE  + +    GP I+ G F +D     +    + +E+  I  +M
Sbjct: 138 TCSFMLGAALNRAFKPEANLQLHSFPGPNIKSGSFVHDIVLQTQNWEPAKEEMRAISAEM 197

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN--VTLYRQGEWFDLCR 184
            ++ A+D    +  +  + A+E+F+  K  YK E L SI  + N  VTLYR G+  D+ R
Sbjct: 198 VKLAAQDLRIERLDVQQDLAQEMFKDSK--YKSEQLPSIAQQTNGRVTLYRLGDHIDISR 255

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           GP V ST  +    K    A      +       RI G A  +  +L    +
Sbjct: 256 GPMVASTSFLG---KCAISAAHKVAEEGPSGAFYRIQGVALPSGFQLNHVAF 304


>gi|195125579|ref|XP_002007255.1| GI12837 [Drosophila mojavensis]
 gi|193918864|gb|EDW17731.1| GI12837 [Drosophila mojavensis]
          Length = 460

 Score =  107 bits (268), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 60/361 (16%), Positives = 120/361 (33%), Gaps = 28/361 (7%)

Query: 269 HRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
                +     I+ ++R +++   ++I+ P +    LW+++G  D   +  + V+     
Sbjct: 50  MPIAQRALDKCINLVQRNMQEAGGQKISLPVLTPTQLWKKTGRLDGDISEFYMVRD---- 105

Query: 328 IKDLRTFALKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
            +  + F + P +     A+       SYR+LP+ L + G  +R+E      GLMR + F
Sbjct: 106 -RSGKQFLMSPTHEEAITAMLATTAPISYRQLPLLLYQIGPKFRDELKSRF-GLMRAKEF 163

Query: 387 TQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
              D + F  +KE+       +       ++      + V+ +T       S      + 
Sbjct: 164 LMKDMYTFDVSKEKAELTYATVSEAYERFFRQLEVPFVKVEAATGIMGGSLSHEYHYISP 223

Query: 446 NIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSR 505
                +L+   +S     N  V   +     P  +      + R                
Sbjct: 224 VGEDTLLNC--SSCGYAGNAEVFGEDATSTCPNCQ---STQLNRVRGVEVAHTFLLGDKY 278

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE----NFKGNLPLWLSPIQAIVTTI 560
                    +    P  +    +G  I R I   +E      +   P  L+P    +   
Sbjct: 279 SKPLGATYLNTSGKPETLVMGCYGIGITRIIAAALEVLSTEHELRWPTLLAPYDVCLIGP 338

Query: 561 TSSAVEYA--QEIANLLKSHHLSI------ETDFRNE-TINYKIREHSIKKIPIIIICGD 611
              + E    + I + L      +        D R E TI  ++ E      P+ ++ G 
Sbjct: 339 KQGSKEQVSGERIESDLLQQLTQVCGAEQLLHDDRKELTIGKRLMEAKRLGHPLTVVVGA 398

Query: 612 K 612
           K
Sbjct: 399 K 399


>gi|331085860|ref|ZP_08334943.1| hypothetical protein HMPREF0987_01246 [Lachnospiraceae bacterium
           9_1_43BFAA]
 gi|330406783|gb|EGG86288.1| hypothetical protein HMPREF0987_01246 [Lachnospiraceae bacterium
           9_1_43BFAA]
          Length = 580

 Score =  107 bits (268), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 40/200 (20%), Positives = 80/200 (40%), Gaps = 6/200 (3%)

Query: 12  GSI-KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRS 69
           G + + +    T   ++E          V V ++ ++ +L   ++ +  ++ +T  +   
Sbjct: 36  GKVLRQYEAGTTYEKISEDFQAEYENDIVLVFVDNRLQELGKKLKKDCVLKFVTTGEAIG 95

Query: 70  LAVIRHSCAHIMAEAVQSIWPE---VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKM 126
               R S + ++ +AV ++       +V I   +  G+Y   +     + D L ++  +M
Sbjct: 96  NQTYRRSMSLLLVKAVYNVAGHENIDKVRILYSVSKGYYCKVEGNVVVNQDFLNRVTIRM 155

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGP 186
           ++I+  D P  K+ +S   A  LF       K E L        V LY   E+ D   G 
Sbjct: 156 RDIVEADIPIKKRSVSTPDATALFHQYGMVDK-EKLFEYRRGSKVNLYSLNEFEDYYYGY 214

Query: 187 HVRSTGQVKKFFKLMKVAGA 206
            + ST  +K F   +   G 
Sbjct: 215 MLPSTRYLKYFELHLYDEGF 234


>gi|33322975|gb|AAQ07224.1|AF496532_1 threonyl-tRNA synthetase 1 [Lactobacillus delbrueckii subsp.
           lactis]
          Length = 123

 Score =  107 bits (268), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 44/129 (34%), Positives = 69/129 (53%), Gaps = 10/129 (7%)

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            +I+ +Y DF       +LS R  K       +D +W+ +++++K  +D +       ++
Sbjct: 1   QIIMDVYHDFDINDYYFRLSYRDPKNTDKYFANDEMWERSQSMLKAAMDDMG------LD 54

Query: 465 TGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIH 524
                GE AFYGPK +   K A+G D    TIQ+DF LP RF   Y+ +  E+  PVMIH
Sbjct: 55  YVEAEGEAAFYGPKLDIQTKTALGNDETMSTIQLDFMLPERFELSYIGADGEEXRPVMIH 114

Query: 525 RAVFGSIER 533
           R + G++ER
Sbjct: 115 RGIVGTMER 123


>gi|325662010|ref|ZP_08150629.1| hypothetical protein HMPREF0490_01367 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|325471673|gb|EGC74892.1| hypothetical protein HMPREF0490_01367 [Lachnospiraceae bacterium
           4_1_37FAA]
          Length = 564

 Score =  107 bits (268), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 40/200 (20%), Positives = 80/200 (40%), Gaps = 6/200 (3%)

Query: 12  GSI-KNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRS 69
           G + + +    T   ++E          V V ++ ++ +L   ++ +  ++ +T  +   
Sbjct: 20  GKVLRQYEAGTTYEKISEDFQAEYENDIVLVFVDNRLQELGKKLKKDCVLKFVTTGEAIG 79

Query: 70  LAVIRHSCAHIMAEAVQSIWPE---VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKM 126
               R S + ++ +AV ++       +V I   +  G+Y   +     + D L ++  +M
Sbjct: 80  NQTYRRSMSLLLVKAVYNVAGHENIDKVRILYSVSKGYYCKVEGNVVVNQDFLNRVTIRM 139

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGP 186
           ++I+  D P  K+ +S   A  LF       K E L        V LY   E+ D   G 
Sbjct: 140 RDIVEADIPIKKRSVSTPDATALFHQYGMVDK-EKLFEYRRGSKVNLYSLNEFEDYYYGY 198

Query: 187 HVRSTGQVKKFFKLMKVAGA 206
            + ST  +K F   +   G 
Sbjct: 199 MLPSTRYLKYFELHLYDEGF 218


>gi|296436840|gb|ADH19010.1| prolyl-tRNA synthetase [Chlamydia trachomatis G/11222]
          Length = 581

 Score =  107 bits (268), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 82/213 (38%), Gaps = 9/213 (4%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
                   +E+    +  L +   LF  ++   G+  +     ++   +   +R ++   
Sbjct: 8   YRTSKNANKEASVLSYELLQKAGYLFKTSK---GIYSYTPLFQRVILKMTEIIREELNAI 64

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
             +E+  P +    LW+++G W ++ +        D   ++ +   L P +         
Sbjct: 65  GGQEVCLPLLQPAELWEKTGRWKAFLSEKLLYVLKD---RENKAMCLAPTHEEVVSEFVA 121

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIH 408
             L    +LP+ L + G+ +R+E      GLMR + F  +D++ F  + EQM  +  K+ 
Sbjct: 122 QWLTGREQLPIHLYQIGTKFRDEIRPRF-GLMRAKEFLMEDSYTFSDSPEQMEEQYAKLR 180

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALW 441
                I+     + ++V        +  S+   
Sbjct: 181 LAYQRIFDRLNLKYVIVAADGGKIGKGKSEEFH 213



 Score = 57.5 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 58/157 (36%), Gaps = 9/157 (5%)

Query: 491 WQCGTIQVDFNLPSRF-NAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN--- 545
           +Q   +   FNL +R+  +F V    +     +     +G  + R +   IE    N   
Sbjct: 406 FQGVEVAHIFNLGTRYTESFSVGFQDKNGDKQLCWMGTYGIGVGRTLAACIEQLADNKGL 465

Query: 546 -LPLWLSPIQAIVT--TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
             PL ++P    +      +     A ++   L +       + RNE + +K+++  +  
Sbjct: 466 VWPLAVAPFSITILYNGGDTEGEATALQLYQSLNTEGFEPLLNDRNERLGFKLKDSDLLG 525

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
           IP  +I G    S   + I    S     VS  + + 
Sbjct: 526 IPYKLIIGKSFQSTGLLEIESR-SGEKCNVSPENLLD 561


>gi|296435914|gb|ADH18088.1| prolyl-tRNA synthetase [Chlamydia trachomatis G/9768]
 gi|296437774|gb|ADH19935.1| prolyl-tRNA synthetase [Chlamydia trachomatis G/11074]
 gi|297140274|gb|ADH97032.1| prolyl-tRNA synthetase [Chlamydia trachomatis G/9301]
          Length = 581

 Score =  107 bits (268), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 82/213 (38%), Gaps = 9/213 (4%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
                   +E+    +  L +   LF  ++   G+  +     ++   +   +R ++   
Sbjct: 8   YRTSKNANKEASVLSYELLQKAGYLFKTSK---GIYSYTPLFQRVILKMTEIIREELNAI 64

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
             +E+  P +    LW+++G W ++ +        D   ++ +   L P +         
Sbjct: 65  GGQEVCLPLLQPAELWEKTGRWKAFLSEKLLYVLKD---RENKAMCLAPTHEEVVSEFVA 121

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIH 408
             L    +LP+ L + G+ +R+E      GLMR + F  +D++ F  + EQM  +  K+ 
Sbjct: 122 QWLTGREQLPIHLYQIGTKFRDEIRPRF-GLMRAKEFLMEDSYTFSDSPEQMEEQYAKLR 180

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALW 441
                I+     + ++V        +  S+   
Sbjct: 181 LAYQRIFDRLNLKYVIVAADGGKIGKGKSEEFH 213



 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 58/157 (36%), Gaps = 9/157 (5%)

Query: 491 WQCGTIQVDFNLPSRF-NAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN--- 545
           +Q   +   FNL +R+  +F V    +     +     +G  + R +   IE    N   
Sbjct: 406 FQGVEVAHIFNLGTRYTESFSVGFQDKNGDKQLCWMGTYGIGVGRTLAACIEQLADNKGL 465

Query: 546 -LPLWLSPIQAIVT--TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
             PL ++P    +      +     A ++   L +       D RNE + +K+++  +  
Sbjct: 466 VWPLAVAPFSITILYNGGDTEGEATALQLYQSLNTEGFEPLLDDRNERLGFKLKDSDLLG 525

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
           IP  +I G    S   + I    S     VS  + + 
Sbjct: 526 IPYKLIIGKSFQSTGLLEIESR-SGEKCNVSPENLLD 561


>gi|255311199|ref|ZP_05353769.1| prolyl-tRNA synthetase [Chlamydia trachomatis 6276]
 gi|255317500|ref|ZP_05358746.1| prolyl-tRNA synthetase [Chlamydia trachomatis 6276s]
          Length = 581

 Score =  107 bits (268), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 82/213 (38%), Gaps = 9/213 (4%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
                   +E+    +  L +   LF  ++   G+  +     ++   +   +R ++   
Sbjct: 8   YRTSKNANKEASVLSYELLQKAGYLFKTSK---GIYSYTPLFQRVILKMTEIIREELNAI 64

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
             +E+  P +    LW+++G W ++ +        D   ++ +   L P +         
Sbjct: 65  GGQEVCLPLLQPAELWEKTGRWKAFLSEKLLYVLKD---RENKAMCLAPTHEEVVSEFVA 121

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIH 408
             L    +LP+ L + G+ +R+E      GLMR + F  +D++ F  + EQM  +  K+ 
Sbjct: 122 QWLTGREQLPIHLYQIGTKFRDEIRPRF-GLMRAKEFLMEDSYTFSDSPEQMEEQYAKLR 180

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALW 441
                I+     + ++V        +  S+   
Sbjct: 181 LAYQRIFDRLNLKYVIVAADGGKIGKGKSEEFH 213



 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 58/157 (36%), Gaps = 9/157 (5%)

Query: 491 WQCGTIQVDFNLPSRF-NAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN--- 545
           +Q   +   FNL +R+  +F V    +     +     +G  + R +   IE    N   
Sbjct: 406 FQGVEVAHIFNLGTRYTESFSVGFQDKNGDKQLCWMGTYGIGVGRTLAACIEQLADNKGL 465

Query: 546 -LPLWLSPIQAIVT--TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
             PL ++P    +      +     A ++   L +       D RNE + +K+++  +  
Sbjct: 466 VWPLAVAPFSITILYNGGDTEGEATALQLYQSLNTEGFEPLLDDRNERLGFKLKDSDLLG 525

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
           IP  +I G    S   + I    S     VS  + + 
Sbjct: 526 IPYKLIIGKSFQSTGLLEIESR-SGEKCNVSPENLLD 561


>gi|237802818|ref|YP_002888012.1| prolyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT]
 gi|237804740|ref|YP_002888894.1| prolyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|231273040|emb|CAX09953.1| prolyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|231274052|emb|CAX10846.1| prolyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT]
          Length = 581

 Score =  107 bits (268), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 82/213 (38%), Gaps = 9/213 (4%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
                   +E+    +  L +   LF  ++   G+  +     ++   +   +R ++   
Sbjct: 8   YRTSKNANKEASVLSYELLQKAGYLFKTSK---GIYSYTPLFQRVILKMTEIIREELNAI 64

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
             +E+  P +    LW+++G W ++ +        D   ++ +   L P +         
Sbjct: 65  GGQEVCLPLLQPAELWEKTGRWKAFLSEKLLYVLKD---RENKAMCLAPTHEEVVSEFVA 121

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIH 408
             L    +LP+ L + G+ +R+E      GLMR + F  +D++ F  + EQM  +  K+ 
Sbjct: 122 QWLTGREQLPIHLYQIGTKFRDEIRPRF-GLMRAKEFLMEDSYTFSDSPEQMEEQYAKLR 180

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALW 441
                I+     + ++V        +  S+   
Sbjct: 181 LAYQRIFDRLNLKYVIVAADGGKIGKGKSEEFH 213



 Score = 61.0 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 58/157 (36%), Gaps = 9/157 (5%)

Query: 491 WQCGTIQVDFNLPSRF-NAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN--- 545
           +Q   +   FNL +R+  +F V    +     +     +G  + R +   IE    N   
Sbjct: 406 FQGVEVAHIFNLGTRYTESFSVGFQDKNGDKQLCWMGTYGIGVGRTLAACIEQLADNKGL 465

Query: 546 -LPLWLSPIQAIVT--TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
             PL ++P    +      +     A ++   L +       D RNE + +K+++  +  
Sbjct: 466 VWPLAVTPFSITILYNGGDTEGEATALQLYQSLNTEGFEPLLDDRNERLGFKLKDSDLLG 525

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
           IP  +I G    S   + I    S     VS  + + 
Sbjct: 526 IPYKLIIGKSFQSTGLLEIESR-SGEKCNVSPENLLD 561


>gi|166154604|ref|YP_001654722.1| prolyl-tRNA synthetase [Chlamydia trachomatis 434/Bu]
 gi|166155479|ref|YP_001653734.1| prolyl-tRNA synthetase [Chlamydia trachomatis L2b/UCH-1/proctitis]
 gi|301335871|ref|ZP_07224115.1| prolyl-tRNA synthetase [Chlamydia trachomatis L2tet1]
 gi|226699129|sp|B0B7W3|SYP_CHLT2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226699130|sp|B0BC28|SYP_CHLTB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|165930592|emb|CAP04089.1| prolyl-tRNA synthetase [Chlamydia trachomatis 434/Bu]
 gi|165931467|emb|CAP07043.1| prolyl-tRNA synthetase [Chlamydia trachomatis L2b/UCH-1/proctitis]
          Length = 581

 Score =  107 bits (268), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 82/213 (38%), Gaps = 9/213 (4%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
                   +E+    +  L +   LF  ++   G+  +     ++   +   +R ++   
Sbjct: 8   YRTSKNANKEASVLSYELLQKAGYLFKTSK---GIYSYTPLFQRVILKMTEIIREELNAI 64

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
             +E+  P +    LW+++G W ++ +        D   ++ +   L P +         
Sbjct: 65  GGQEVCLPLLQPAELWEKTGRWKAFLSEKLLYVLKD---RENKAMCLAPTHEEVVSEFVA 121

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIH 408
             L    +LP+ L + G+ +R+E      GLMR + F  +D++ F  + EQM  +  K+ 
Sbjct: 122 QWLTGREQLPIHLYQIGTKFRDEIRPRF-GLMRAKEFLMEDSYTFSDSPEQMEEQYAKLR 180

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALW 441
                I+     + ++V        +  S+   
Sbjct: 181 LAYQRIFDRLNLKYVIVAADGGKIGKGKSEEFH 213



 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 58/157 (36%), Gaps = 9/157 (5%)

Query: 491 WQCGTIQVDFNLPSRF-NAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN--- 545
           +Q   +   FNL +R+  +F V    +     +     +G  + R +   IE    N   
Sbjct: 406 FQGVEVAHIFNLGTRYTESFSVGFQDKNGDKQLCWMGTYGIGVGRTLAACIEQLADNKGL 465

Query: 546 -LPLWLSPIQAIVT--TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
             PL ++P    +      +     A ++   L +       D RNE + +K+++  +  
Sbjct: 466 VWPLAVAPFSITILYNGGDTEGEATALQLYQSLNTEGFEPLLDDRNERLGFKLKDSDLLG 525

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
           IP  +I G    S   + I    S     VS  + + 
Sbjct: 526 IPYKLIIGKSFQSTGLLEIESR-SGEKCNVSPENLLD 561


>gi|76789124|ref|YP_328210.1| prolyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13]
 gi|114152182|sp|Q3KLW0|SYP_CHLTA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|76167654|gb|AAX50662.1| prolyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13]
          Length = 581

 Score =  107 bits (268), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 82/213 (38%), Gaps = 9/213 (4%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
                   +E+    +  L +   LF  ++   G+  +     ++   +   +R ++   
Sbjct: 8   YRTSKNANKEASVLSYELLQKAGYLFKTSK---GIYSYTPLFQRVILKMTEIIREELNAI 64

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
             +E+  P +    LW+++G W ++ +        D   ++ +   L P +         
Sbjct: 65  GGQEVCLPLLQPAELWEKTGRWKAFLSEKLLYVLKD---RENKAMCLAPTHEEVVSEFVA 121

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIH 408
             L    +LP+ L + G+ +R+E      GLMR + F  +D++ F  + EQM  +  K+ 
Sbjct: 122 QWLTGREQLPIHLYQIGTKFRDEIRPRF-GLMRAKEFLMEDSYTFSDSPEQMEEQYAKLR 180

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALW 441
                I+     + ++V        +  S+   
Sbjct: 181 LAYQRIFDRLNLKYVIVAADGGKIGKGKSEEFH 213



 Score = 61.0 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 58/157 (36%), Gaps = 9/157 (5%)

Query: 491 WQCGTIQVDFNLPSRF-NAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN--- 545
           +Q   +   FNL +R+  +F V    +     +     +G  + R +   IE    N   
Sbjct: 406 FQGVEVAHIFNLGTRYTESFSVGFQDKNGDKQLCWMGTYGIGVGRTLAACIEQLADNKGL 465

Query: 546 -LPLWLSPIQAIVT--TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
             PL ++P    +      +     A ++   L +       D RNE + +K+++  +  
Sbjct: 466 VWPLAVTPFSITILYNGGDTEGEATALQLYQSLNTEGFEPLLDDRNERLGFKLKDSDLLG 525

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
           IP  +I G    S   + I    S     VS  + + 
Sbjct: 526 IPYKLIIGKSFQSTGLLEIESR-SGEKCNVSPENLLD 561


>gi|15605118|ref|NP_219903.1| prolyl-tRNA synthetase [Chlamydia trachomatis D/UW-3/CX]
 gi|6686306|sp|P36431|SYP_CHLTR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|3328819|gb|AAC67990.1| Prolyl tRNA Synthetase [Chlamydia trachomatis D/UW-3/CX]
 gi|297748523|gb|ADI51069.1| Prolyl-tRNA synthetase [Chlamydia trachomatis D-EC]
 gi|297749403|gb|ADI52081.1| Prolyl-tRNA synthetase [Chlamydia trachomatis D-LC]
          Length = 581

 Score =  107 bits (268), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 82/213 (38%), Gaps = 9/213 (4%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
                   +E+    +  L +   LF  ++   G+  +     ++   +   +R ++   
Sbjct: 8   YRTSKNANKEASVLSYELLQKAGYLFKTSK---GIYSYTPLFQRVILKMTEIIREELNAI 64

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
             +E+  P +    LW+++G W ++ +        D   ++ +   L P +         
Sbjct: 65  GGQEVCLPLLQPAELWEKTGRWKAFLSEKLLYVLKD---RENKAMCLAPTHEEVVSEFVA 121

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIH 408
             L    +LP+ L + G+ +R+E      GLMR + F  +D++ F  + EQM  +  K+ 
Sbjct: 122 QWLTGREQLPIHLYQIGTKFRDEIRPRF-GLMRAKEFLMEDSYTFSDSPEQMEEQYAKLR 180

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALW 441
                I+     + ++V        +  S+   
Sbjct: 181 LAYQRIFDRLNLKYVIVAADGGKIGKGKSEEFH 213



 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 58/157 (36%), Gaps = 9/157 (5%)

Query: 491 WQCGTIQVDFNLPSRF-NAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGN--- 545
           +Q   +   FNL +R+  +F V    +     +     +G  + R +   IE    N   
Sbjct: 406 FQGVEVAHIFNLGTRYTESFSVGFQDKNGDKQLCWMGTYGIGVGRTLAACIEQLADNKGL 465

Query: 546 -LPLWLSPIQAIVT--TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
             PL ++P    +      +     A ++   L +       D RNE + +K+++  +  
Sbjct: 466 VWPLAVAPFSITILYNGGDTEGEATALQLYQSLNTEGFEPLLDDRNERLGFKLKDSDLLG 525

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
           IP  +I G    S   + I    S     VS  + + 
Sbjct: 526 IPYKLIIGKSFQSTGLLEIESR-SGEKCNVSPENLLD 561


>gi|168214896|ref|ZP_02640521.1| phosphoribulokinase [Clostridium perfringens CPE str. F4969]
 gi|170713666|gb|EDT25848.1| phosphoribulokinase [Clostridium perfringens CPE str. F4969]
          Length = 551

 Score =  107 bits (267), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 44/172 (25%), Positives = 82/172 (47%), Gaps = 2/172 (1%)

Query: 45  GKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG 103
            K  + +D +  +G IE+I   DP        +   +  +A   ++ + ++ I   I  G
Sbjct: 43  NKYYEFTDLINNDGDIELINISDPHGKIAYSRTLQFVFIKATLDLFKDARINIEHSISKG 102

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE 163
            + +  KE+    +++ +I+KKMQEII ++    K  +  ++A ++F+S K   KV++L 
Sbjct: 103 TFGEIHKEKALDEEDILKIKKKMQEIIDKNIIIEKIKMPKKEAIDIFKSYKMQDKVDLLH 162

Query: 164 SIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRP 215
            +   E V LY+  + +D   G    STG +K F  L    G      S++ 
Sbjct: 163 WVQE-EYVNLYKLEDRYDYFYGDMAYSTGVLKYFDLLYYNPGFILMVPSHKE 213


>gi|291527128|emb|CBK92714.1| Uridine kinase [Eubacterium rectale M104/1]
          Length = 579

 Score =  107 bits (267), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 43/231 (18%), Positives = 83/231 (35%), Gaps = 29/231 (12%)

Query: 4   DIKLTFPDGSIKNFPVHA--TGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIE 60
            +K+T PDG +         T   VA+          +   +NG++ +L+  ++ +  + 
Sbjct: 5   SVKVTLPDGQVMAVTASESDTLEAVADRFKDYYEDDIILGIVNGRLRELNKKIKSDCELS 64

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWP-EVQVAIGPIIEDGFYYDFDK--------- 110
            +T  D       R S   ++  A+  ++    Q+ +   + +G+Y   +K         
Sbjct: 65  FVTTADRDGRRTYRRSVVLLLQRAIYDVYGSMTQLHVMHSLGEGYYCQLEKAVECADSQQ 124

Query: 111 ---------------EQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKE 155
                          E+  +  ++ +I   M   + +D P  K     + A +LF+ K  
Sbjct: 125 EKYNEDTDQGSRENSEKSVTEHDIDRIVCSMYSFVEKDLPITKHSEKTQYAEQLFKEKGL 184

Query: 156 AYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGA 206
             K  +L        V LY      D   G    STG +K F  +   +G 
Sbjct: 185 HDKERLL-HYRRSSRVNLYELDGVVDYFYGFMAPSTGMLKYFDIVPYESGF 234


>gi|168207596|ref|ZP_02633601.1| phosphoribulokinase [Clostridium perfringens E str. JGS1987]
 gi|170661048|gb|EDT13731.1| phosphoribulokinase [Clostridium perfringens E str. JGS1987]
          Length = 551

 Score =  107 bits (267), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 44/172 (25%), Positives = 82/172 (47%), Gaps = 2/172 (1%)

Query: 45  GKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG 103
            K  + +D +  +G IE+I   DP        +   +  +A   ++ + ++ I   I  G
Sbjct: 43  NKYYEFTDLINNDGDIELINISDPHGKIAYSRTLQFVFIKATLDLFKDARINIEHSISKG 102

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE 163
            + +  KE+    +++ +I+KKMQEII ++    K  +  ++A ++F+S K   KV++L 
Sbjct: 103 TFGEIHKEKALDEEDILKIKKKMQEIIDKNIIIEKIKMPKKEAIDIFKSYKMQDKVDLLH 162

Query: 164 SIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRP 215
            +   E V LY+  + +D   G    STG +K F  L    G      S++ 
Sbjct: 163 WVQE-EYVNLYKLEDRYDYFYGDMAYSTGVLKYFDLLYYNPGFILMVPSHKE 213


>gi|313895739|ref|ZP_07829295.1| phosphoribulokinase/uridine kinase family protein [Selenomonas sp.
           oral taxon 137 str. F0430]
 gi|312975865|gb|EFR41324.1| phosphoribulokinase/uridine kinase family protein [Selenomonas sp.
           oral taxon 137 str. F0430]
          Length = 538

 Score =  107 bits (267), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 44/240 (18%), Positives = 92/240 (38%), Gaps = 7/240 (2%)

Query: 22  TGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIRHSCAHI 80
           +  ++A   S   A   VA  ++G+V DL     E   I+ I         V R S   +
Sbjct: 4   SLLEIAREHSHEYASPIVAAVVDGEVHDLQSLYHESNDIKFIELNSRLGWRVYRRSVLFL 63

Query: 81  MAEAVQSIWPEVQVAIGPIIEDGFYYDF-DKEQPFSSDELAQIEKKMQEIIARDSPFLKQ 139
           +  AV  +  + +V     +  G + +    ++      + +IE  M+++I+ +  F K+
Sbjct: 64  LIVAVNELDKDAEVIAKFTVNKGLFCEIQHPDKSIDVHFVKEIEAVMRQMISENIAFCKR 123

Query: 140 YLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFK 199
            ++ E+A ELF  +    KV ++  +  +  ++LY    + D   GP +  T ++ +F  
Sbjct: 124 SVAREEAIELFRKEGRYGKVHLISELT-QPYISLYTCKSYADYLYGPMLHETKELNQFEL 182

Query: 200 LMKVAGAYWRGDSNRPMLSRIYGTAWNT----QQELTQYLYFLEESEKRDHRKLAREMDL 255
             +  G   R                        E   +   L+     D  ++ +  ++
Sbjct: 183 DHEKTGVLIRTPDEMTNGKIRKRINQPKFELILSESKTWADILDCRYISDLNRINKNHEI 242


>gi|169342484|ref|ZP_02863541.1| phosphoribulokinase [Clostridium perfringens C str. JGS1495]
 gi|169299382|gb|EDS81448.1| phosphoribulokinase [Clostridium perfringens C str. JGS1495]
          Length = 551

 Score =  107 bits (267), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 43/172 (25%), Positives = 82/172 (47%), Gaps = 2/172 (1%)

Query: 45  GKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG 103
            K  + +D +  +G IE++   DP        +   +  +A   ++ + ++ I   I  G
Sbjct: 43  NKYYEFTDFINNDGDIELVNISDPHGKIAYSRTLQFVFIKATLDLFKDARINIEHSISKG 102

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE 163
            + +  KE+    +++ +I+KKMQEII ++    K  +  ++A ++F+S K   KV++L 
Sbjct: 103 TFGEIHKEKALDEEDILKIKKKMQEIIDKNIIIEKIKMPRKEAIDIFKSYKMKDKVDLLH 162

Query: 164 SIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRP 215
            +   E V LY+  + +D   G    STG +K F  L    G      S++ 
Sbjct: 163 WVQE-EYVNLYKLEDRYDYFYGDMAYSTGVLKYFDLLYYNPGFILMVPSHKD 213


>gi|307244024|ref|ZP_07526143.1| phosphoribulokinase/uridine kinase family protein
           [Peptostreptococcus stomatis DSM 17678]
 gi|306492548|gb|EFM64582.1| phosphoribulokinase/uridine kinase family protein
           [Peptostreptococcus stomatis DSM 17678]
          Length = 551

 Score =  107 bits (267), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 37/208 (17%), Positives = 79/208 (37%), Gaps = 15/208 (7%)

Query: 1   MPSDI------KLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV 54
           M + I      ++   DG I+        S +AE +            I  K  DL+  +
Sbjct: 1   MSNLIVRVDGKEIRIEDGKIR-------LSKLAEMLKDDYQGHICMAKIKNKYHDLNYVL 53

Query: 55  REG-SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQP 113
                + +I       + +     + ++  A + ++ + +V I   I  G Y      + 
Sbjct: 54  HTSEDVHLIDTTGDDGIRLYFRGLSLLLVMACRDVFDKCKVFIKHSIAGGLYCLLKMPKD 113

Query: 114 FSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTL 173
            + +++  ++ KM+E I +D      Y+ +++A + FE  +   K  +L      +   +
Sbjct: 114 LTDEDVEILKAKMKEYIKKDYKITCHYMPNDQAIDKFEEVRRFDKSNLL-KYRDDDLTKV 172

Query: 174 YRQGEWFDLCRGPHVRSTGQVKKFFKLM 201
           Y    +FD   G    ST  ++ F  + 
Sbjct: 173 YECNGYFDYFYGYMFPSTSYIEDFDLVR 200


>gi|17946007|gb|AAL49047.1| RE50565p [Drosophila melanogaster]
          Length = 310

 Score =  107 bits (267), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 54/213 (25%), Positives = 101/213 (47%), Gaps = 25/213 (11%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKV-CDLSDPVRE-GS 58
           +P D+ L   +G+I      +T  + A+ +S    K++    I+G V  D+  P++E  +
Sbjct: 65  LPEDVTLVM-NGNI------STPFNCAQHLSEGHCKRSALALIDGSVPWDMHRPLQESCT 117

Query: 59  IEIITPEDPRSL---AVIRHSCAHIMAEAVQSIW-PEVQVAI----GPIIEDG-FYYDF- 108
           ++++                +C+ ++  A+   + PE  + +    GP I+ G F +D  
Sbjct: 118 LQLLNFHVSEPHVVNKAFWRTCSFMLGAALNRAFKPEANLQLHSFPGPNIKSGSFVHDIV 177

Query: 109 --DKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIP 166
              +      +E+  +  +M ++ A+D    +  +  + A+E+F+  K  YK E L SI 
Sbjct: 178 LQTQNWEPGKEEMRALSAEMVKLAAQDLRIERLDVQQDLAQEMFKDSK--YKSEQLPSIS 235

Query: 167 AKEN--VTLYRQGEWFDLCRGPHVRSTGQVKKF 197
            + N  VTLYR G+  D+ RGP V ST  + K 
Sbjct: 236 QQTNGRVTLYRLGDHIDISRGPMVASTSFLGKC 268


>gi|254518003|ref|ZP_05130059.1| phosphoribulokinase/uridine kinase [Clostridium sp. 7_2_43FAA]
 gi|226911752|gb|EEH96953.1| phosphoribulokinase/uridine kinase [Clostridium sp. 7_2_43FAA]
          Length = 551

 Score =  107 bits (267), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 53/209 (25%), Positives = 87/209 (41%), Gaps = 8/209 (3%)

Query: 12  GSIKNFPVHATGSDVAESISRSL---AKKAVAVAINGKVCDL-SDPVREGSIEIITPEDP 67
           G   +     T  +    I  SL   +       +N K  +L  D    G IE+I  + P
Sbjct: 10  GKEYDVQEGITYKEF---IDTSLNINSTDVALCRLNRKYHELFKDIDSNGEIELIMFDSP 66

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQ 127
               +   +   I  +A   ++    + I   I +G + +  KE+  SS+++ +I+ +M+
Sbjct: 67  IGYKIYTRTLQFIFIKATLDLFDNSVITIEHSIGEGVFGELHKEEALSSEDIDKIKLRMK 126

Query: 128 EIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPH 187
           EII +D P  K  +  EKA E+F+      KV +L  +   ENV LY     +D   G  
Sbjct: 127 EIIEKDLPINKIKVKIEKAIEIFKEYGMDDKVSLLNQVSF-ENVNLYELDGRYDYFYGQM 185

Query: 188 VRSTGQVKKFFKLMKVAGAYWRGDSNRPM 216
             STG +K F  +    G   R      +
Sbjct: 186 AYSTGVIKAFDLMYYDPGFVLRYPKKDDL 214


>gi|254569756|ref|XP_002491988.1| Protein with similarity to tRNA synthetases [Pichia pastoris GS115]
 gi|238031785|emb|CAY69708.1| Protein with similarity to tRNA synthetases [Pichia pastoris GS115]
 gi|328351517|emb|CCA37916.1| prolyl-tRNA synthetase [Pichia pastoris CBS 7435]
          Length = 564

 Score =  107 bits (267), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 49/256 (19%), Positives = 96/256 (37%), Gaps = 25/256 (9%)

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEI 294
                 +   H  L +   ++  A    G++ W   G + ++ L + +R+++ +    E+
Sbjct: 22  KLFSVKDLTTHDMLLQSRFIYQPAA---GIVHWLPLGLRTYKKLQNVIRKRMDQAGGLEM 78

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
               +  +HLW+++  WD+    +F  K + D     R + L P        +      S
Sbjct: 79  ELSSLSSKHLWERTKRWDN--NELFKFKDSKD-----RDYCLVPTCEEEITNLVGDLCSS 131

Query: 355 YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIIS 413
           Y++LP+ + +    YR+E      GL+R R F   DA+ F  TKE        ++     
Sbjct: 132 YKDLPLLVYQISRKYRDELRPR-GGLLRGREFLMKDAYSFDLTKEDGLKSYDNVNEAYRR 190

Query: 414 IYKDF-----------GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
           I++D            G     + L        G D L+          ++  ++    +
Sbjct: 191 IFQDLKLPVTVANADSGSIGGDLSLEYHLIHESGEDILFRCNSCQTVSNVEKCQSLPDKQ 250

Query: 463 INTGVLLGEGAFYGPK 478
              GV   E  ++  K
Sbjct: 251 FK-GVQEAECQYFINK 265



 Score = 47.1 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 23/120 (19%), Positives = 49/120 (40%), Gaps = 10/120 (8%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPI 553
           +D    S  +   VN  +E+   V +     G   R I  +     +      P  ++P 
Sbjct: 386 LDKKYSSPLDCTVVNEQNEQTT-VYMGCYGIGVS-RLIAAIAQTSRDEVGLTWPQIIAPY 443

Query: 554 QAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET--INYKIREHSIKKIPIIIICGD 611
           Q  + +  +S+ +    +  +L S    ++ D R+    + +K+++  +  IP+ II G 
Sbjct: 444 QITLLSNKTSSKKNLDTVTEILSS--FDVQVDNRDGKFSMGHKLKQSKVAGIPLQIIVGK 501


>gi|159901383|ref|YP_001547630.1| prolyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
 gi|159894422|gb|ABX07502.1| prolyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
          Length = 570

 Score =  107 bits (266), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 39/195 (20%), Positives = 81/195 (41%), Gaps = 11/195 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++   +       ++E   H  L R      + +  +G+        +  Q +   +R +
Sbjct: 4   SKLATSTTKEAPNDAELISHSLLVRAGY---VKQQSAGIYSLLPLCVRSTQKISQIIREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +   D +E+  P V    LW+++G ++     +   K  ++     +   L   +     
Sbjct: 61  MDAIDGQELLMPVVTSADLWRETGRYEGVTEELLRFKDRNN-----KDMVLNMTHEEVVT 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNEC 404
            +    +KSYR++PV + +  + YR+E      G++R+R FT  DA+ F  T E +    
Sbjct: 116 DIMRRYIKSYRQMPVMVYQIQTKYRDEARPR-GGIIRLREFTMKDAYSFHATIEDLDQYY 174

Query: 405 LKIHNLIISIYKDFG 419
            ++ N    IY+  G
Sbjct: 175 EQVLNAYKRIYQRCG 189



 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/162 (17%), Positives = 62/162 (38%), Gaps = 11/162 (6%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF----K 543
           R  + G I  +     +     + N   E   P ++     G ++R +  +IE F     
Sbjct: 399 RAIEVGNIFKLGTKYSAAMKCVFANEKGEMQ-PAIMGCYGIG-VQRILASLIEKFNDARG 456

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLL----KSHHLSIETDFRNETINYKIREHS 599
             LP+ ++P Q  V      +    + +A+ L    ++  +++  D R+     K  +  
Sbjct: 457 MMLPITVAPYQVHVVGTDYQSNAETKSVADQLYSDLQAQGVTVLLDDRDVNAGNKFGDAD 516

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           +   PI +I G +        ++   +  T  V+L D +  +
Sbjct: 517 LIGNPIQVIIGSRGLKNGQAEVKIRSTGETTMVALADLLSHV 558


>gi|291526138|emb|CBK91725.1| Uridine kinase [Eubacterium rectale DSM 17629]
          Length = 580

 Score =  107 bits (266), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 43/232 (18%), Positives = 82/232 (35%), Gaps = 30/232 (12%)

Query: 4   DIKLTFPDGSIKNFPVHA--TGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIE 60
            +K+T PDG +         T   VA+          +   +NG++ +L+  ++ +  + 
Sbjct: 5   SVKVTLPDGQVMAVTASESDTLEAVADRFKDYYEDDIILGIVNGRLRELNKKIKSDCELS 64

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWP-EVQVAIGPIIEDGFYY------------- 106
            +T  D       R S   ++  A+  ++    Q+ +   + +G+Y              
Sbjct: 65  FVTTADRDGRRTYRRSVVLLLQRAIYDVYGSMTQLHVMHSLGEGYYCQLEKAVGCADSQQ 124

Query: 107 -----DFDK-------EQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
                D D        E+  +  ++ +I   M   + +D P  K     + A + F+ K 
Sbjct: 125 EKYNEDTDLQGSRENSEKSVTEHDIDRIVCSMYSFVEKDLPITKHSAKTQYAEQFFKEKG 184

Query: 155 EAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGA 206
              K  +L        V LY      D   G    STG +K F  +   +G 
Sbjct: 185 LHDKERLL-HYRRSSRVNLYELDGVVDYFYGFMAPSTGMLKYFDIVPYESGF 235


>gi|258648384|ref|ZP_05735853.1| phosphoribulokinase family protein [Prevotella tannerae ATCC 51259]
 gi|260851554|gb|EEX71423.1| phosphoribulokinase family protein [Prevotella tannerae ATCC 51259]
          Length = 531

 Score =  107 bits (266), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 41/194 (21%), Positives = 81/194 (41%), Gaps = 3/194 (1%)

Query: 24  SDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIRHSCAHIMA 82
            +V + +  +L  +  +V +N K   L   +  +  IE I   +P  +     S   ++ 
Sbjct: 2   EEVYDMLEINLPYECTSVKVNNKTEGLHYTIYNDKDIEFIDITNPSGMRTYTRSLFFVLY 61

Query: 83  EAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQIEKKMQEIIARDSPFLKQYL 141
           +AV  ++P+ ++ I   + +G+Y          + D +A +  KM+ II  + P+ +   
Sbjct: 62  KAVCEVYPQARLRIDTPVSNGYYCRLSGLPAGVNGDVVAALRNKMRAIIDANLPYHRITA 121

Query: 142 SHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLM 201
             ++A  LF   +   K ++LE        T Y  G   D   G  + +TGQ++ F  + 
Sbjct: 122 PTDEAIALFRQHRLEDKAQLLEG-SGLLYTTYYTLGGTPDYFYGSLLINTGQLQLFDLVP 180

Query: 202 KVAGAYWRGDSNRP 215
              G   R    + 
Sbjct: 181 YYDGLLLRVPDPKN 194


>gi|325280067|ref|YP_004252609.1| AAA ATPase [Odoribacter splanchnicus DSM 20712]
 gi|324311876|gb|ADY32429.1| AAA ATPase [Odoribacter splanchnicus DSM 20712]
          Length = 554

 Score =  107 bits (266), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 44/248 (17%), Positives = 96/248 (38%), Gaps = 10/248 (4%)

Query: 16  NFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLS----DPVREGSIEIITPEDPRSLA 71
              +  T  DV + I        +   +N ++ DL      P+R   +  I        +
Sbjct: 16  EIELGTTLRDVKKIIFPENHNHILGALVNNQLQDLQFVVMTPLR---VNFIDVTTLDGYS 72

Query: 72  VIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF-DKEQPFSSDELAQIEKKMQEII 130
           +   S   ++ +AV  ++P+  +     I +G +    +KE   +   ++++E KM+EII
Sbjct: 73  IYSRSLIFVLYQAVAQLFPKKTLRAEYFISNGIFCRIVNKEIVLTPAIISELENKMKEII 132

Query: 131 ARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRS 190
             D P +++ +  ++A  +F  +    K +++E+   K   +LY   +  D   G    S
Sbjct: 133 QADYPIVREEIPTDEAVLIFRKRGLKDKADLMET-RGKLFTSLYYLNDLPDYFYGTLAPS 191

Query: 191 TGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES-EKRDHRKL 249
           T  +K F  +    G   +          +     +   ++        +  E  D   L
Sbjct: 192 TSCLKTFGLIPYKEGMLLQLPDRTDPTRVLPVIPQDKLYQVFSEYKRWGKILEVTDIGHL 251

Query: 250 AREMDLFH 257
            + ++L +
Sbjct: 252 NKIVELKY 259


>gi|195492914|ref|XP_002094195.1| GE21696 [Drosophila yakuba]
 gi|194180296|gb|EDW93907.1| GE21696 [Drosophila yakuba]
          Length = 458

 Score =  107 bits (266), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 76/397 (19%), Positives = 144/397 (36%), Gaps = 35/397 (8%)

Query: 269 HRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
                +     I  ++  +     ++I  P +    LW+++G  +   +  + V+     
Sbjct: 50  MPMAQRSVDKFIDLVQSNMLLAGGQKITLPILTPTALWRKTGRLEGDISEFYMVRD---- 105

Query: 328 IKDLRTFALKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
            +  + F + P +     A+       SYR+LP+RL + G  +R+E      GLMR + F
Sbjct: 106 -RSGKQFLMSPTHEEAVTAMLASTSPISYRQLPLRLFQIGPKFRDELKTRF-GLMRAKEF 163

Query: 387 TQDDAHVFCTKEQMFNECLKIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
              D + F   E+   E   + N     ++K      + V   T       S      + 
Sbjct: 164 LMKDMYSFDVCEETARETYSVVNAAYDRLFKQLEVPFVKVNADTGMMGGSVSHEYHYVSA 223

Query: 446 NIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF-EYILKDAIGRDWQCGTIQVDFNLPS 504
                +L    +S     NT V+    +   P      LK+  G +    T  +      
Sbjct: 224 VGEDNLLQC--SSCGFAGNTEVVKTPAS--CPSCNSTDLKEVRGVEV-AHTFLLGDKYSK 278

Query: 505 RFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE----NFKGNLPLWLSPIQAIVTT 559
              A ++   + K  P  +    +G  I R I   +E    + + + P  L+P    +  
Sbjct: 279 PLGATFL---NTKGKPQSLVMGCYGIGITRVIAAALEVLSSDHELHWPKLLAPYDVCLIG 335

Query: 560 ITSSAVEY--AQEIANLLKSH------HLSIETDFRNE-TINYKIREHSIKKIPIIIICG 610
               + E   A+ I N L  +      H  +  D R E TI  ++ E      P+II+ G
Sbjct: 336 PKQGSKEQSEAEMIENELVLNVGEICGHQELLHDDRKELTIGKRLLEAKRLGHPLIIVVG 395

Query: 611 DKEASERS--IGIRRFGSTTTQKVSLLDAIPILTKES 645
            K   + S  + +      T + + L + + ++ + S
Sbjct: 396 AKAIRQDSPKLEVHTSKGETLE-LDLSETLKLVAEHS 431


>gi|146420078|ref|XP_001485997.1| hypothetical protein PGUG_01668 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 526

 Score =  107 bits (266), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 37/193 (19%), Positives = 65/193 (33%), Gaps = 15/193 (7%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
                    +   +  +   H+   +   L  I     G++ W   GW + + L + + R
Sbjct: 6   PRIYLTNAEILSKDFRKVPTHQLYTK---LGFINHPKQGLVHWMPPGWNMVRKLQTIIHR 62

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
            +     EE+N   +    LW ++G W+    N    K  D          L        
Sbjct: 63  HMVGAGAEEVNLSLLSSAELWNKTGRWE----NNELFKLNDGET------CLAATCEEEI 112

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + + SY+ LP+   +    YR+E      GL+R R F   DA+ F   E++  E 
Sbjct: 113 TQLVKNQIASYKSLPLLYYQIKEKYRDEKRPR-GGLLRGREFLMKDAYSFDIDEKLAMET 171

Query: 405 LKIHNLIISIYKD 417
                        
Sbjct: 172 YNTVVNAYHGVFK 184



 Score = 56.3 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/141 (24%), Positives = 59/141 (41%), Gaps = 22/141 (15%)

Query: 516 EKCHPVMIHRAVFGSIERFIGIMIENFKG----NLPLWLSPIQAIVTTITSSAVEYAQEI 571
            +   +M+     G + R IG + E  K       P  +SP  A V T      E  +++
Sbjct: 395 TEERNLMMGCYGIG-LSRIIGAIGEICKDENGFRWPAAISPWTATVITSG----ELGEDL 449

Query: 572 ANLLKSHHLSIETDFRNET-INYKIREHSIKKIPIIIICGDK----EASERSIGIRRFGS 626
              L+S ++ +  D R++  I  K+R+     IPI II G+K    E     + +R  G 
Sbjct: 450 KQTLESMNIDMCVDSRSKVGIGKKVRQSQAMGIPISIIVGNKYPQIE-----VNVRGVGK 504

Query: 627 TTTQKVSLLDA---IPILTKE 644
              + V + +    +  + KE
Sbjct: 505 DEVRMVGVDELGEYVGRVLKE 525


>gi|190345647|gb|EDK37570.2| hypothetical protein PGUG_01668 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 526

 Score =  107 bits (266), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 37/193 (19%), Positives = 64/193 (33%), Gaps = 15/193 (7%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
                    +   +  +   H+   +   L  I     G++ W   GW + + L + + R
Sbjct: 6   PRIYSTNAEILSKDFRKVPTHQLYTK---LGFINHPKQGLVHWMPPGWNMVRKLQTIIHR 62

Query: 286 KIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
            +     EE+N   +    LW ++G W+    N    K  D          L        
Sbjct: 63  HMVGAGAEEVNLSLLSSAELWNKTGRWE----NNELFKLNDGET------CLAATCEEEI 112

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             +  + + SY+ LP+   +    YR+E      GL+R R F   DA+ F   E+   E 
Sbjct: 113 TQLVKNQIASYKSLPLLYYQIKEKYRDEKRPR-GGLLRGREFLMKDAYSFDIDEKSAMET 171

Query: 405 LKIHNLIISIYKD 417
                        
Sbjct: 172 YNTVVNAYHGVFK 184



 Score = 56.3 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/141 (24%), Positives = 59/141 (41%), Gaps = 22/141 (15%)

Query: 516 EKCHPVMIHRAVFGSIERFIGIMIENFKG----NLPLWLSPIQAIVTTITSSAVEYAQEI 571
            +   +M+     G + R IG + E  K       P  +SP  A V T      E  +++
Sbjct: 395 TEERNLMMGCYGIG-LSRIIGAIGEICKDENGFRWPAAISPWTATVITSG----ELGEDL 449

Query: 572 ANLLKSHHLSIETDFRNET-INYKIREHSIKKIPIIIICGDK----EASERSIGIRRFGS 626
              L+S ++ +  D R++  I  K+R+     IPI II G+K    E     + +R  G 
Sbjct: 450 KQTLESMNIDMCVDSRSKVGIGKKVRQSQAMGIPISIIVGNKYPQIE-----VNVRGVGK 504

Query: 627 TTTQKVSLLDA---IPILTKE 644
              + V + +    +  + KE
Sbjct: 505 DEVRMVGVDELGEYVGRVLKE 525


>gi|210615115|ref|ZP_03290446.1| hypothetical protein CLONEX_02660 [Clostridium nexile DSM 1787]
 gi|210150423|gb|EEA81432.1| hypothetical protein CLONEX_02660 [Clostridium nexile DSM 1787]
          Length = 485

 Score =  107 bits (266), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 37/238 (15%), Positives = 83/238 (34%), Gaps = 5/238 (2%)

Query: 12  GSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSL 70
             +K +    T + +A+   +    + V V  + K+ +L   V ++ ++  +T  D    
Sbjct: 12  NEVKQYEEGTTFAKIAKEYQKQYENEIVLVFEDKKLQELRKGVTKDCTLRFVTTGDSVGN 71

Query: 71  AVIRHSCAHIMAEAVQ---SIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQ 127
              R S   ++ +A+          +V I   +  G+Y   + +       L +++ +M 
Sbjct: 72  QTYRRSMCLMLVKAIYDVCEHKDIWKVRIHFSLSKGYYCTIEGDVAVDQRFLDKVKSRML 131

Query: 128 EIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPH 187
           E++A   P  K+ +  ++A  LF       K E L        V +Y   E+ D   G  
Sbjct: 132 EMVAEKMPIDKRTIHTDEAIALFHKHGMHDK-ERLFEYRRVSKVNIYSMNEFEDYYYGYM 190

Query: 188 VRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           V     +  F   +   G   +                +   ++ +      + +  +
Sbjct: 191 VPDASYLPYFELHLYDEGFVIQMPEKDAPTVVPSFRPQHKLFQVLKESTKWGDIQNIE 248


>gi|254446533|ref|ZP_05060009.1| prolyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235]
 gi|198260841|gb|EDY85149.1| prolyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235]
          Length = 588

 Score =  107 bits (266), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 50/262 (19%), Positives = 95/262 (36%), Gaps = 11/262 (4%)

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISY 282
             + ++  +        E+E   H+ L R   +  +   GSG+  +   G K  + +   
Sbjct: 1   MDYWSKNYIPTLKESPAEAEIDSHKLLLRAGLVRKV---GSGIYAFLPLGTKALENVKRL 57

Query: 283 MRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK--DLRTFALKPM 339
              ++      E+  P V+    W+    W++ R  M+ V  A +  +  +   F L P 
Sbjct: 58  CCEEMNRAGAMELLMPAVVPAEYWKAGPRWNAAREIMYQVASAGEKAEFPEEPAFVLGPT 117

Query: 340 NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKE 398
           +      +      SYR++     +  + +RNE     +GLMR R F   D + F  T E
Sbjct: 118 HEEIVTLLIGGEGMSYRDMGKTFYQVQTKFRNEIRPR-YGLMRAREFIMKDGYSFDATDE 176

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNS 458
           +       +     + +   G + I V+  T       S      AE     V+  I++ 
Sbjct: 177 EATATYKNMAKAYEAFFSRCGLKFISVEADTGVMGGAFSHEFMVPAEVGDDDVVYNIESG 236

Query: 459 SQDRINT---GVLLGEGAFYGP 477
               +     G++  + A   P
Sbjct: 237 YAANVEKATSGIIPADLADATP 258



 Score = 80.6 bits (197), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 36/172 (20%), Positives = 66/172 (38%), Gaps = 12/172 (6%)

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            E      +G  ++ GT    ++    F A YV+    +  P ++     G       I+
Sbjct: 415 LEIQRAIEVGHIFKLGT---KYSENEEFGALYVDKDGNRQ-PSVMGCYGIGISRTLQSII 470

Query: 539 IENFKGNLPLWL---SPIQAIVTTITSSAVEYAQEIANLLKSHHL----SIETDFRNETI 591
            +    N  +W    +P Q I+T +     E A  +A  L         S+  D R E  
Sbjct: 471 EQKHDKNGIVWPWAVAPYQVIITVLDPGMEE-ADTLAIKLGEAAEAAGASVLVDDREERP 529

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             K ++  +  IP+ +  G +      + ++   S + QKV++ DA   L +
Sbjct: 530 GVKFKDADLIGIPLRVTIGGRGLKNGEVEMKWRDSDSVQKVAIADAKQALVE 581


>gi|198464350|ref|XP_001353187.2| GA14359 [Drosophila pseudoobscura pseudoobscura]
 gi|198149679|gb|EAL30689.2| GA14359 [Drosophila pseudoobscura pseudoobscura]
          Length = 334

 Score =  106 bits (265), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 61/253 (24%), Positives = 107/253 (42%), Gaps = 30/253 (11%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKV-CDLSDPVRE-GS 58
           +P D+ L   +         +T  + A+ +S    +++    I+G V  D+  P++E  +
Sbjct: 66  LPEDVTLVMNN-------HISTPFNCAQHLSEGHCRRSALALIDGSVPWDMHRPLQESCT 118

Query: 59  IEIITPEDPRSL---AVIRHSCAHIMAEAVQSIWP-----EVQVAIGPIIEDG-FYYDFD 109
           ++++                +C+ ++  A+  ++      ++    GP I+ G F +D  
Sbjct: 119 LQLLNFNISEPHVVNKAFWRTCSFMLGAALTRVFKAEAKLQLHSFPGPNIKSGSFVHDIV 178

Query: 110 KE---QPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIP 166
            E      +  E+  I  +M ++ A+D    +  +  E A+E+F+  K  YK E L SI 
Sbjct: 179 LETQSWQPTKSEMRAISAEMIKLAAQDLRIERLDVQQELAQEMFKDSK--YKSEQLPSIA 236

Query: 167 AKEN--VTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDS-NRPMLSRIYGT 223
            + N  VTLYR G+  D+ RGP V ST     F     V  A+   D        RI G 
Sbjct: 237 QQSNGRVTLYRLGDHIDISRGPMVAST----HFLGKCTVGAAHKVADEGPAGAFYRIQGV 292

Query: 224 AWNTQQELTQYLY 236
           A     +L    Y
Sbjct: 293 ALPCGFKLNHVAY 305


>gi|320528975|ref|ZP_08030067.1| phosphoribulokinase / Uridine kinase family protein [Selenomonas
           artemidis F0399]
 gi|320138605|gb|EFW30495.1| phosphoribulokinase / Uridine kinase family protein [Selenomonas
           artemidis F0399]
          Length = 538

 Score =  106 bits (265), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 44/240 (18%), Positives = 92/240 (38%), Gaps = 7/240 (2%)

Query: 22  TGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIRHSCAHI 80
           +  ++A   S   A   VA  ++G+V DL     E   I+ I         V R S   +
Sbjct: 4   SLLEIAREHSHEYASPIVAAVVDGEVHDLQSLYHESNDIKFIELNSRLGWRVYRRSVLFL 63

Query: 81  MAEAVQSIWPEVQVAIGPIIEDGFYYDF-DKEQPFSSDELAQIEKKMQEIIARDSPFLKQ 139
           +  AV  +  + +V     +  G + +    ++      + +IE  M+++I+ +  F K+
Sbjct: 64  LIVAVNELDKDAEVIAKFTVNKGLFCEIQHPDKSIDVHFVKEIEAVMRQMISENIAFCKR 123

Query: 140 YLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFK 199
            ++ E+A ELF  +    KV ++  +  +  ++LY    + D   GP +  T ++ +F  
Sbjct: 124 SVAREEAIELFRKEGRYGKVNLISELT-QPYISLYTCKSYADYLYGPMLHETKELNQFEL 182

Query: 200 LMKVAGAYWRGDSNRPMLSRIYGTAWNT----QQELTQYLYFLEESEKRDHRKLAREMDL 255
             +  G   R                        E   +   L+     D  ++ +  ++
Sbjct: 183 DHEKTGVLIRTPDEMTNGKIRKRINQPKFELILSESKTWADILDCRYISDLNRINKNHEI 242


>gi|168334910|ref|ZP_02693030.1| prolyl-tRNA synthetase [Epulopiscium sp. 'N.t. morphotype B']
          Length = 570

 Score =  106 bits (265), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 45/209 (21%), Positives = 84/209 (40%), Gaps = 11/209 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++    ++    +E++   H  L R   +  +A              K+   +   +R +
Sbjct: 4   SKLLGERFKEKPQEAKSISHIFLLRGGYIRQVA--NGLFTMLLP-AQKVKVNIEKIIREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +   D +E+  P VL   LWQ+SG ++S  + +  +K   D     +   L   +    V
Sbjct: 61  MNKIDGQEVIFPVVLPGELWQESGRFESVGSELLRMKDRTD-----KDLVLGMTHEEAAV 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +     KSY + P  + +  + +R+E   S  GL+RVR FT  DA+ F T  +  +   
Sbjct: 116 HLARSEAKSYTQYPFMIYQIQTKFRDEAR-SRGGLIRVREFTMKDAYSFHTSNEDLDAYY 174

Query: 406 -KIHNLIISIYKDFGFEKIMVKLSTRPEK 433
            K       IY+  G  +++   S     
Sbjct: 175 DKCLKAYNEIYRRTGVPEVVCVESDSGMM 203



 Score = 72.1 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 30/172 (17%), Positives = 61/172 (35%), Gaps = 14/172 (8%)

Query: 484 KDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-N 541
           K    R  + G I  +           YV+   +   P+M    +   + R I   IE +
Sbjct: 397 KLTFKRGIEVGNIFKLGTKYTDVMKMTYVDQDGKSKTPIMGCYGI--GVGRLIASAIEAH 454

Query: 542 FKGNLPLWL---SPIQAIVTTITSSAVEY---AQEIANLLKSHHLSIETDFRNETINYKI 595
                P+W    +P Q  +  + S  ++      EI   L S    +  D R      + 
Sbjct: 455 HDDYGPIWPISIAPWQVHICALKSKTMDINAIGAEIYGKL-SQEFEVIFDDRGAAPGVQF 513

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA---IPILTKE 644
            +  +  +P+ I+ G+K     ++ I     +  + ++  D    +  + +E
Sbjct: 514 ADADLLGVPVRIVLGEKNLKNGNVEIVTRDKSIKKLIAKEDVYEEVAAIIRE 565


>gi|195162813|ref|XP_002022248.1| GL25954 [Drosophila persimilis]
 gi|194104209|gb|EDW26252.1| GL25954 [Drosophila persimilis]
          Length = 334

 Score =  106 bits (265), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 61/253 (24%), Positives = 107/253 (42%), Gaps = 30/253 (11%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKV-CDLSDPVRE-GS 58
           +P D+ L   +         +T  + A+ +S    +++    I+G V  D+  P++E  +
Sbjct: 66  LPEDVTLVMNN-------QISTPFNCAQHLSEGHCRRSALALIDGSVPWDMHRPLQESCT 118

Query: 59  IEIITPEDPRSL---AVIRHSCAHIMAEAVQSIWP-----EVQVAIGPIIEDG-FYYDFD 109
           ++++                +C+ ++  A+  ++      ++    GP I+ G F +D  
Sbjct: 119 LQLLNFNISEPHVVNKAFWRTCSFMLGAALTRVFKAEAKLQLHSFPGPNIKSGSFVHDIV 178

Query: 110 KE---QPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIP 166
            E      +  E+  I  +M ++ A+D    +  +  E A+E+F+  K  YK E L SI 
Sbjct: 179 LETQSWQPTKSEMRAISAEMIKLAAQDLRIERLDVQQELAQEMFKDSK--YKSEQLPSIA 236

Query: 167 AKEN--VTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDS-NRPMLSRIYGT 223
            + N  VTLYR G+  D+ RGP V ST     F     V  A+   D        RI G 
Sbjct: 237 QQSNGRVTLYRLGDHIDISRGPMVAST----HFLGKCTVGAAHKVADEGPAGAFYRIQGV 292

Query: 224 AWNTQQELTQYLY 236
           A     +L    Y
Sbjct: 293 ALPCGFKLNHVAY 305


>gi|160915444|ref|ZP_02077655.1| hypothetical protein EUBDOL_01452 [Eubacterium dolichum DSM 3991]
 gi|158432564|gb|EDP10853.1| hypothetical protein EUBDOL_01452 [Eubacterium dolichum DSM 3991]
          Length = 539

 Score =  106 bits (265), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 43/191 (22%), Positives = 83/191 (43%), Gaps = 4/191 (2%)

Query: 18  PVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIRHS 76
               +  ++ E   ++  +   AV INGK+ DL   V+EG S+  +  +      +   +
Sbjct: 14  EKGKSIYELVE--KQADKEHIYAVIINGKLHDLRYCVQEGGSLRFVYAKSETGRLIYERT 71

Query: 77  CAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPF 136
              ++  A      ++ +     + +G Y D      F+  ++ +IEKKM+ IIAR    
Sbjct: 72  LLFLLIAAAHEYRRDLHIIAQHSLSEGVYCDVRCTNTFTPLDVVEIEKKMKAIIARKESI 131

Query: 137 LKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKK 196
            ++ +S ++A   FE+K   YK ++L    +K   ++Y      D   G  +  T  +K+
Sbjct: 132 YRKVVSTKEAAAYFEAKGMLYKADMLAQRKSK-KSSIYTLCGVDDYFYGIMLPDTSYLKE 190

Query: 197 FFKLMKVAGAY 207
           F       G +
Sbjct: 191 FSICFYKQGIW 201


>gi|156548542|ref|XP_001603352.1| PREDICTED: similar to ENSANGP00000016734 [Nasonia vitripennis]
          Length = 339

 Score =  106 bits (265), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 50/232 (21%), Positives = 97/232 (41%), Gaps = 22/232 (9%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITP----EDPRSLAVIRH 75
           +T  D A+ IS  + K A    ++G   D+  P+ ++  I+ +T     + P        
Sbjct: 80  STPDDCAQHISEGIHKTAALALVDGVPWDMHKPLTKDCEIKFLTMLMPKDSPALNPAFWR 139

Query: 76  SCAHIMAEAVQSIWPE-----VQVAIGPIIEDG-FYYDFDKEQP---FSSDELAQIEKKM 126
           +C+ IM   + S + +     +     P ++ G F YD   + P    ++ +L  +  + 
Sbjct: 140 TCSLIMGAMIDSAFKDDIQLYLHSFPRPNLKSGSFTYDVVLDLPDWLPTAAQLRAMSAQF 199

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESI--PAKENVTLYRQGEWFDLCR 184
            +I  R+ P  +  +S E A ++   +   +K + +  I    +  +TLYR GE  D+ +
Sbjct: 200 VKIATRNLPVERLQVSEELALDM--FQDNPFKSKQIPDIAKSNEGRITLYRIGEHIDISK 257

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           GP V +TG + +      +A  +         + R  G A      L  + Y
Sbjct: 258 GPMVGNTGILGRV----TIASVHKIESEESDHMYRFQGVALPKGILLNHFAY 305


>gi|289422737|ref|ZP_06424577.1| phosphoribulokinase/uridine kinase [Peptostreptococcus anaerobius
           653-L]
 gi|289156916|gb|EFD05541.1| phosphoribulokinase/uridine kinase [Peptostreptococcus anaerobius
           653-L]
          Length = 550

 Score =  106 bits (265), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 35/157 (22%), Positives = 65/157 (41%), Gaps = 2/157 (1%)

Query: 41  VAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPI 99
             IN K+ +L+  + ++  +E I         +     + ++  A + ++ E +V I   
Sbjct: 40  AKINNKLYNLNHILYKDSEVEFIDTLKEDGKRLYFRGLSLLLVMACKDLFEEAKVYINHS 99

Query: 100 IEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKV 159
           +  G Y    K+   S  ++  I+ KM E + +D      YL  ++A E F S     K 
Sbjct: 100 MSGGLYCVVKKKDSLSDKDIESIKAKMLEYVEKDLTIKCNYLPSDEAIEKFCSINWDEKA 159

Query: 160 EILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKK 196
           E+L      + + +Y    + D   G    STG +K 
Sbjct: 160 ELL-KYRKDDIIKVYECNGYIDYFYGLMFPSTGHIKD 195


>gi|225377884|ref|ZP_03755105.1| hypothetical protein ROSEINA2194_03544 [Roseburia inulinivorans DSM
           16841]
 gi|225210322|gb|EEG92676.1| hypothetical protein ROSEINA2194_03544 [Roseburia inulinivorans DSM
           16841]
          Length = 560

 Score =  106 bits (265), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 43/214 (20%), Positives = 85/214 (39%), Gaps = 11/214 (5%)

Query: 12  GSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSD-PVREGSIEIITPEDPRSL 70
           G  K +P   +   +A+  S +     V V  N ++ +L+     +G++E +T  D    
Sbjct: 12  GEKKEYPAGTSFLRIAQDYSDAYQDDIVLVLYNRRLRELNKCADGDGTVEFLTTADKTGK 71

Query: 71  AVIRHSCAHIMAEAVQSIW--PEVQVAIGPIIEDGFYYDFDKEQPFSSD-------ELAQ 121
              R S   +M +AV ++W    + V +   I  G Y +  K +  + +       E+ +
Sbjct: 72  KAYRRSVTLLMQKAVYNLWGKGNISVRVKYSIGQGNYCELVKWENDTEEVVKVTGTEINK 131

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           ++ +M +++  D    K+ ++ + A  LF       K E L        V +Y    + D
Sbjct: 132 LKNEMYQMVVSDIEIHKESINTDDAVTLFHDLGMTDK-EKLFRYRRSSRVNIYELDHYMD 190

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRP 215
              G  V STG ++ +  +    G   +      
Sbjct: 191 YFYGFMVPSTGYLRYYDVIPYADGFMLQFPDKNT 224


>gi|291535914|emb|CBL09026.1| prolyl-tRNA synthetase, family II [Roseburia intestinalis M50/1]
          Length = 567

 Score =  106 bits (265), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 37/193 (19%), Positives = 79/193 (40%), Gaps = 11/193 (5%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-D 290
            ++     +     H  + +   + ++A        +     +I + +   +R ++   D
Sbjct: 9   ERFRERPADCVIDSHALMVKGGYMKYMA--NGIYSSYLPL-KRITRKIEQILREEMDKLD 65

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH 350
            +E++ P V+   LW++SG ++S    +      ++         L   +    V +   
Sbjct: 66  GQEVSFPVVMPASLWEESGRYESVGEELLRFTDRNNA-----KMVLGMTHEEAAVHLVRE 120

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHN 409
             KSY + P  + +  + +R+E      GL+RVR FT  DA+ F T ++  N+   K H 
Sbjct: 121 YAKSYNKYPFMIYQIQTKFRDEARPR-AGLIRVREFTMKDAYSFHTSQEDLNQYYEKCHK 179

Query: 410 LIISIYKDFGFEK 422
               I++  G  +
Sbjct: 180 AYERIFERAGIPE 192



 Score = 80.6 bits (197), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 58/163 (35%), Gaps = 10/163 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNL 546
           R  + G I Q+           YV+ + E   P+M    +   + R    + E +     
Sbjct: 405 RGIEVGNIFQLGDKYTRAMKMTYVDQNGESKTPIMGCYGI--GVGRLAAAVCEAHHDEYG 462

Query: 547 PLWL---SPIQA---IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           P+W    +P Q     V        ++A ++   L+   + +  D R  +      +  +
Sbjct: 463 PIWPKSIAPWQVHLCAVRADNEEVRKFADDLYEKLQEIGIEVIYDDRTVSAGVMFSDADL 522

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             IP+ +I   +   +  + +     T   +V + +A   + K
Sbjct: 523 LGIPLRVIVSPRNMKQGVVEVASRDKTLQTQVKMEEAAEQVKK 565


>gi|149179156|ref|ZP_01857725.1| prolyl-tRNA synthetase [Planctomyces maris DSM 8797]
 gi|148842016|gb|EDL56410.1| prolyl-tRNA synthetase [Planctomyces maris DSM 8797]
          Length = 584

 Score =  106 bits (265), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 83/217 (38%), Gaps = 8/217 (3%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +   +        ++E   H+ + R   +  +    +G   +   GWK  Q     +R 
Sbjct: 3   WSNTLIPTIKEVPADAEIPSHQLMLRAGLIRQL---MAGAYTYLPLGWKAIQKAAQIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E++ P +    L++++   +++ + +                AL P +    
Sbjct: 60  EMDAAGAAELHMPALQPIGLFERTQRKEAFGSVLIQFNVP--RGNRQIPMALGPTHEEVV 117

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             + +H + SY++LP+ + +  + +RNE       L R   F   DA+ F +  +  +E 
Sbjct: 118 TDLISHCISSYKQLPLTVYQIQTKFRNEERPRFGVL-RTSEFLMKDAYSFSSSVKQLDEI 176

Query: 405 L-KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
             +++     I+   G + + V+  + P     S   
Sbjct: 177 YDRMYRAYCRIFARCGLKYLPVEAESGPIGGDASHEF 213



 Score = 83.3 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 54/133 (40%), Gaps = 8/133 (6%)

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTIT---SSAV 565
              EK HP+++     G + R +  + E          PL ++P + +V  +       +
Sbjct: 431 DEKEKRHPIIMGCYGIG-VNRIVAGLAETRHDENGLIWPLSIAPYEVLVIPLNVKDDEVM 489

Query: 566 EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
           + A+   N LK+  + +  D RN     K ++  +  IP  ++ G K   +  I  +   
Sbjct: 490 QTAERYYNELKAAGVDVLFDDRNARPGVKFKDADLIGIPYRVVIGGKGLQKGEIETKWRT 549

Query: 626 STTTQKVSLLDAI 638
           +   + ++L   I
Sbjct: 550 AENAEMIALDAGI 562


>gi|160881639|ref|YP_001560607.1| phosphoribulokinase/uridine kinase [Clostridium phytofermentans
           ISDg]
 gi|160430305|gb|ABX43868.1| phosphoribulokinase/uridine kinase [Clostridium phytofermentans
           ISDg]
          Length = 553

 Score =  106 bits (265), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 46/205 (22%), Positives = 85/205 (41%), Gaps = 6/205 (2%)

Query: 6   KLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITP 64
           K+T  +G  K +       ++++        + + V +NG++ +L   V+ + +IE +T 
Sbjct: 5   KVTV-NGVTKEYTQGTAYLEISKEYQPQFKHEIILVLMNGRLRELFKTVKQDCTIEFVTI 63

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQ---VAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
            +             +M  A+  +        V +   I  G Y + D +    +  + +
Sbjct: 64  TEDAGRKTYARGLIFVMIRAIYRVLGHDNIDKVRVEHSIGSGLYCELDGKVKVDATLMDK 123

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           ++K+MQ II RD PF+K+ ++  +A ELF   +   K E L       +  LY    + D
Sbjct: 124 VKKEMQSIIHRDIPFMKRSIATAEAAELFHKYQMYDK-EKLFRYRRVSSANLYNLDGFED 182

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGA 206
              G    STG +K F       G 
Sbjct: 183 YYYGYMPASTGILKYFDIFPYEDGF 207


>gi|170064309|ref|XP_001867472.1| mitochondrial 39S ribosomal protein L39 [Culex quinquefasciatus]
 gi|167881734|gb|EDS45117.1| mitochondrial 39S ribosomal protein L39 [Culex quinquefasciatus]
          Length = 331

 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 52/232 (22%), Positives = 97/232 (41%), Gaps = 20/232 (8%)

Query: 21  ATGSDVAESISRSLAKKAVAVAIN-GKVCDLSDPVRE-GSIEIITPEDPR---SLAVIRH 75
           +T  D A  I     + +    ++     D+  P+ E  +++++         +      
Sbjct: 75  STPYDCARHIGEKYCRYSALALLDSNTPWDMRRPLEESCTLQLLNFTASEPHIANKAFWR 134

Query: 76  SCAHIMAEAVQSIW-PEVQVAIG----PIIEDG-FYYDFDKEQ---PFSSDELAQIEKKM 126
           +C+ ++  A+Q  + PE  + +     P I+ G F +D    +     +  EL  +  +M
Sbjct: 135 TCSFLLGAALQKAFKPEAGLFLHSFPKPSIKSGSFVHDIALAREGWTPTVHELRALSIEM 194

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPA--KENVTLYRQGEWFDLCR 184
            ++  +D P  +  +S E A+E+       YK E + SI A     VT+YR GE  D+ +
Sbjct: 195 IKLSQQDQPIERLDVSSELAQEM--FADNPYKREQVPSISAQNNGQVTVYRVGEHVDISK 252

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           GP + STG + K            R  +++  L R+ G A      L  + Y
Sbjct: 253 GPMISSTGLLGKCTVAA--VHQVPRNSADKLSLYRVQGVALPVGLNLNHFAY 302


>gi|182626478|ref|ZP_02954229.1| putative threonyl-tRNA synthetase/uridine kinase [Clostridium
           perfringens D str. JGS1721]
 gi|177908218|gb|EDT70779.1| putative threonyl-tRNA synthetase/uridine kinase [Clostridium
           perfringens D str. JGS1721]
          Length = 551

 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 44/172 (25%), Positives = 82/172 (47%), Gaps = 2/172 (1%)

Query: 45  GKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG 103
            K  + +D +  +G IE+I   DP        +   +  +A   ++ + ++ I   I  G
Sbjct: 43  NKYYEFTDFINNDGDIELINISDPHGKIAYSRTLQFVFIKATLDLFKDARINIEHSISKG 102

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE 163
            + +  KE+    +++ +I+KKMQEII ++    K  +  ++A ++F+S K   KV++L 
Sbjct: 103 TFGEIHKEKALDEEDILKIKKKMQEIIDKNIIIEKIKMPKKEAIDIFKSYKMQDKVDLLH 162

Query: 164 SIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRP 215
            +   E V LY+  + +D   G    STG +K F  L    G      S++ 
Sbjct: 163 WVQE-EYVNLYKLEDRYDYFYGDMAYSTGVLKYFDLLYYNPGFILMVPSHKE 213


>gi|156841840|ref|XP_001644291.1| hypothetical protein Kpol_1030p43 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156114930|gb|EDO16433.1| hypothetical protein Kpol_1030p43 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 580

 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 44/224 (19%), Positives = 79/224 (35%), Gaps = 14/224 (6%)

Query: 217 LSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIF 276
           L  I                     E      L +   L  I    SG I W   G +  
Sbjct: 6   LGNINFLRSLHSFLPKIKKSGNGNIESLQTADLMKHAGL--IHGSRSGFINWLPLGLRSL 63

Query: 277 QTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           + L   +  K+++     E+    +  + LW++S  W++    +F +K + D       +
Sbjct: 64  RKLELLIHNKMQNEAGAYEVKLSTISPKDLWEKSNRWNN--KELFKLKDSKDA-----QY 116

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
            L          +  + + SY+ +P+ + + G+ +R+E      GL+R R F   DA+ F
Sbjct: 117 CLTATCEEDITNLMMNYITSYKNMPITVYQIGNKFRDEKRPR-GGLLRAREFLMKDAYSF 175

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD 438
              +    E     N +      F   KI  K +      +G D
Sbjct: 176 ARSKAQAIEAFNNMNKVYDSL--FTELKIPFKSAWADSGDIGGD 217


>gi|89268180|emb|CAJ81960.1| mitochondrial ribosomal protein L39 [Xenopus (Silurana) tropicalis]
          Length = 352

 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 51/252 (20%), Positives = 100/252 (39%), Gaps = 28/252 (11%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPEDPRSLAV---IRHS 76
           +T    A  +S     ++V   ++G+V D+  P+ +  +I+ +T +D     V      S
Sbjct: 99  STPYHCALHLSEWYCSRSVLALVDGEVWDMYKPLTKSCNIQFLTFKDEDPEEVNKAYWRS 158

Query: 77  CAHIMAEAVQSIWPEVQV------AIGPIIEDGFYYDF------DKEQPFSSDELAQIEK 124
           CA I+   +++ + E  +         P+I   F YD       D  +P + + L  + +
Sbjct: 159 CAMILGCVLENAFKEEYMVNLIRAPEIPVISGAFCYDVVLDSRLDDWRP-TEENLRSLTR 217

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN---VTLYRQGEWFD 181
           +   +I +D PF    +  E+       +   YK+ + E   ++     VT++R G++ D
Sbjct: 218 EAHSLIHKDLPFESLEV--EEKVAKEIFQHSPYKLIMAEEKASQNPQGLVTVHRFGDFVD 275

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           L  GPH+  T     F +  +V   +   +     + R  G +      L  +       
Sbjct: 276 LTEGPHIPRTS----FCQQYEVTAGHSLANIPSEHVRRFQGLSLP--WHLKAHHTVWNRL 329

Query: 242 EKRDHRKLAREM 253
             R  R +  E 
Sbjct: 330 RTRSQRLVTEEH 341


>gi|195587264|ref|XP_002083385.1| GD13380 [Drosophila simulans]
 gi|194195394|gb|EDX08970.1| GD13380 [Drosophila simulans]
          Length = 458

 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 67/361 (18%), Positives = 122/361 (33%), Gaps = 30/361 (8%)

Query: 269 HRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
                +     I  ++  ++    ++I  P +    LW+++G  +   +  + V+     
Sbjct: 50  MPMAQRSVDKCIDLVQSNMQQAGGQKITLPILTPTGLWKKTGRLEGDISEFYMVRD---- 105

Query: 328 IKDLRTFALKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
            +  + F + P +     A+       SYR+LP+RL + G  +R+E      GLMR + F
Sbjct: 106 -RSGKQFLMSPTHEEAVTAMLATTSPISYRQLPLRLFQIGPKFRDELKTRF-GLMRAKEF 163

Query: 387 TQDDAHVFCTKEQMFNECLKIHNL-IISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
              D + F   E+   E   + N     ++K      + V  +T       S      + 
Sbjct: 164 LMKDMYTFDVSEESARETYSVVNSAYDRLFKQLEVPFVKVNAATGMMGGSVSHEYHYVSP 223

Query: 446 NIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF-EYILKDAIGRDWQCGTIQVDFNLPS 504
                +L                        P      LK+  G +    T  +      
Sbjct: 224 VGEDNLLQCSSCGFAGNSEVVTAPAR----CPSCNSSDLKEVRGVEV-AHTFLLGDKYSK 278

Query: 505 RFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE----NFKGNLPLWLSPIQAIVT-- 558
              A ++N+  +    VM    +   I R I   +E    + +   P  L+P    +   
Sbjct: 279 PLGATFLNTSGKPQSLVMGCYGI--GITRVIAAALEVLSSDHELRWPKLLAPYDVCLIGP 336

Query: 559 TITSSAVEYAQEIANLLKSH------HLSIETDFRNE-TINYKIREHSIKKIPIIIICGD 611
              S     A+ I N L  +      H  +  D R E TI  ++ E      P+ I+ G 
Sbjct: 337 KQGSKEQPQAEVIENELLLNVGEICGHQELLHDDRKELTIGKRLLEAKRLGHPLTIVVGA 396

Query: 612 K 612
           K
Sbjct: 397 K 397


>gi|284053071|ref|ZP_06383281.1| threonyl-tRNA synthetase [Arthrospira platensis str. Paraca]
          Length = 103

 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 26/103 (25%), Positives = 50/103 (48%), Gaps = 4/103 (3%)

Query: 550 LSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIIC 609
           ++P+   V  ++    +YA+ I   LK  ++  E D   E +  +IR   ++KIP+ ++ 
Sbjct: 1   MAPVMVRVLVVSDRFRDYAKSIVQSLKQQNIRAEVDNTGERLGKQIRACELEKIPVTVVI 60

Query: 610 GDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQK 652
           G +E   +S+ +R         ++L    P LT+E L  +  K
Sbjct: 61  GQRELDNQSLSVRTRSRGDIGTMTL----PQLTEEILKANAAK 99


>gi|330930995|ref|XP_003303228.1| hypothetical protein PTT_15359 [Pyrenophora teres f. teres 0-1]
 gi|330938329|ref|XP_003305730.1| hypothetical protein PTT_18645 [Pyrenophora teres f. teres 0-1]
 gi|311317156|gb|EFQ86197.1| hypothetical protein PTT_18645 [Pyrenophora teres f. teres 0-1]
 gi|311320895|gb|EFQ88675.1| hypothetical protein PTT_15359 [Pyrenophora teres f. teres 0-1]
          Length = 529

 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 43/197 (21%), Positives = 74/197 (37%), Gaps = 14/197 (7%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
              Y       +   H  L R   L       SGV      G ++   L   + + +   
Sbjct: 9   HVTYNQSANSHQDESHSLLVRGGFLRQAH---SGVFHLLPLGLRVQNKLEGLIDKHMNSI 65

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
              +++   +  + LWQQSG    Y AN   ++  D   +    F L P +     A+  
Sbjct: 66  GASKVSLSSITTEALWQQSGR---YSANSELLRIKD---RRESGFLLSPTHEEEITALVA 119

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
             + SY++LP+RL + G  YR+E      GL+R + F   D + F   +      L+ + 
Sbjct: 120 SMVHSYKDLPLRLYQIGRKYRDERRPR-GGLLRAKEFVMKDLYTF---DSSPKAALETYE 175

Query: 410 LIISIYKDFGFEKIMVK 426
            +   Y +   E  +  
Sbjct: 176 SVRQAYNNLFNELKLPY 192



 Score = 60.6 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 23/154 (14%), Positives = 56/154 (36%), Gaps = 11/154 (7%)

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI----MIENFKGNLPL 548
             T  +        NA           P  +     G   R IG     + +    N P 
Sbjct: 367 GHTFHLGTRYSVPLNAVIALPDQNLSSPTHMGCHGIGVS-RIIGAVASLLSDARGLNWPR 425

Query: 549 WLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF-----RNETINYKIREHSIKKI 603
            ++P +AIV +   +  +   E+ + L     + + D        +++ +K+++  +   
Sbjct: 426 VIAPYEAIVLSDPKTEEKDTTEVYDALHGEGRNSDIDLVLDDRAGKSLGWKLKDADLIGY 485

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
           P++++ G +   ++ + I+       + V L + 
Sbjct: 486 PVVVVMG-RSWKDKRVEIQCRRLGVKKDVELNEL 518


>gi|325972766|ref|YP_004248957.1| prolyl-tRNA synthetase [Spirochaeta sp. Buddy]
 gi|324028004|gb|ADY14763.1| Prolyl-tRNA synthetase [Spirochaeta sp. Buddy]
          Length = 588

 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 33/165 (20%), Positives = 68/165 (41%), Gaps = 8/165 (4%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
            I + G+G+      G+   + +   +R+++     +EI  P V    +W+++G + S  
Sbjct: 31  FIRQLGAGIFSLLPFGFNATKKIEQIIRQEMNAIGGQEILMPLVNPADIWKETGRYYSID 90

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
             M          +  R   L   +      +    + SY+ LP+ + +  + +R++P  
Sbjct: 91  KEMSRFSD-----RVGRDMVLAMTHEEAVTDLARGEIDSYKRLPLLVYQIQTKWRDDPRP 145

Query: 376 SLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFG 419
              GL+RVR FT  D++ F    E +  +    +     I+   G
Sbjct: 146 R-AGLIRVREFTMKDSYSFDVDQEGLDAQYAAHYKAYFRIFSRCG 189



 Score = 76.4 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 72/183 (39%), Gaps = 11/183 (6%)

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
           +      +  P+    L  + G +      Q++       N  Y +    +  PV++   
Sbjct: 390 IASAAAGYSCPECSKPLSSSKGVEV-GNIFQLNTRYSESMNCSYQDEGGLRK-PVIMGSY 447

Query: 527 VFGSIERFIGIMIENFKGNL----PLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSI 582
             G + R +  + EN+        P+ ++P+Q  + ++   A E  ++I N L    + +
Sbjct: 448 GIG-VGRLLACLAENYSDEQGLSLPISVAPMQVHLVSLVKDA-EIGEQIYNKLSDAGIEV 505

Query: 583 ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             D R E+   K  +  +  +PI I  G++   E  + ++   +   +  S    +  + 
Sbjct: 506 LYDDRKESAGVKFADADLIGLPIRITLGNRSLKEGKVEVKLRRNLE-ESFSFE--LASVV 562

Query: 643 KES 645
           +E+
Sbjct: 563 EET 565


>gi|76162547|gb|AAX30465.2| SJCHGC03807 protein [Schistosoma japonicum]
          Length = 106

 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 22/93 (23%), Positives = 41/93 (44%), Gaps = 1/93 (1%)

Query: 552 PIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICG 610
           P Q +V  + S+  EYA E+ N L      +  D     T+N KIR   + +   I++ G
Sbjct: 1   PRQVLVVPVVSACDEYAIEVKNRLHDAGFMVSVDTDPGRTLNKKIRNGQLLQNNFILVVG 60

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +KE +  ++ +R   +    +  +   I    +
Sbjct: 61  EKEIANGTVNVRTRDNKVHGEHLVEHVIERFRQ 93


>gi|148665896|gb|EDK98312.1| mitochondrial ribosomal protein L39 [Mus musculus]
 gi|151357466|emb|CAO78080.1| mitochondrial ribosomal protein L39 [Mus musculus]
          Length = 336

 Score =  106 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 47/230 (20%), Positives = 90/230 (39%), Gaps = 24/230 (10%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPEDPRSLAV---IRHS 76
           +T    A  +S     K++   ++G+  D+  P+ +   I+ +T +DP    V      S
Sbjct: 83  STPYSCAMHLSEWYCSKSILALVDGQPWDMYKPLTKSCEIKFLTFKDPDPKEVNKAYWRS 142

Query: 77  CAHIMAEAVQSIWPEVQV------AIGPIIEDGFYYDFDKEQP-----FSSDELAQIEKK 125
           CA ++   ++  + +  V         P+I   F YD   ++       + + L    K 
Sbjct: 143 CAMMLGCVIERAFKDDYVVSLVRAPEVPVIAGAFCYDVTLDKRLDEWMPTKENLRSFTKD 202

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN---VTLYRQGEWFDL 182
              +I RD PF    +    A E+   +   YKV+ +E   ++     V L+R G++ D+
Sbjct: 203 AHALIYRDLPFETLDVDARVALEI--FQHNKYKVDFIEEKASQNPERIVKLHRIGDFIDV 260

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELT 232
             GP +  T          +V+  +    S   ++ R  G +  T     
Sbjct: 261 SEGPLIPRTS----VCFQYEVSAVHNLNPSQPNLIRRFQGLSLPTHLRAQ 306


>gi|33322995|gb|AAQ07234.1|AF496542_1 threonyl-tRNA synthetase 1 [Lactobacillus delbrueckii subsp.
           lactis]
          Length = 107

 Score =  106 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 36/111 (32%), Positives = 61/111 (54%), Gaps = 5/111 (4%)

Query: 264 GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK 322
           G+ +W  KG  I + +  Y   +++      + TP +++   ++ SGHWD YR +MF   
Sbjct: 1   GLPYWMPKGATIRRIIERYXXDKEVAAGXXHVYTPVLMNLDAYKTSGHWDHYREDMFPPM 60

Query: 323 CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP 373
                  +     L+PMNCP H+ ++ H ++SYRELP+R+AE G ++R   
Sbjct: 61  DMG----EGEMLELRPMNCPSHIQIYKHHIRSYRELPIRIAELGMMHRYXK 107


>gi|302340220|ref|YP_003805426.1| prolyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
 gi|301637405|gb|ADK82832.1| prolyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
          Length = 562

 Score =  106 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 40/167 (23%), Positives = 70/167 (41%), Gaps = 8/167 (4%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
            I   G G+  +   G K+ + L   +R ++     +E++ P V    +W++SG      
Sbjct: 31  FIRPLGHGLYSYLPLGVKVVEKLRKIIREEMDRLGGQEVSVPLVNPADIWKRSGREHLID 90

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
             M          +  R + L P +    V +  +GL+SYR+ PV L +F   +R+E   
Sbjct: 91  RAMIRFSD-----RSGRRYVLSPSHEEAFVELARYGLRSYRDFPVLLFQFQRKFRDEER- 144

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFE 421
              GL+R++ F   DA+ F       N    K+      I+   G +
Sbjct: 145 VRQGLVRLKEFEMKDAYSFHRSATALNNFFPKMFAAYERIFSRCGLD 191



 Score = 66.7 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 64/188 (34%), Gaps = 25/188 (13%)

Query: 479 FEYILKDAIGRDWQCGT-------------IQVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
            +  +     R  QCGT              ++           +   + ++ +P   H 
Sbjct: 379 VDIAMIRKSDRCIQCGTPLEAVRAIELGNIFKLGDFYARGMELVFREENGKRLYP---HM 435

Query: 526 AVFGS-IERFIGIMIENFKGN----LPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHL 580
             +G  I+R +G + E  +       P  L+P +  +  I   A    +E+  L  S   
Sbjct: 436 GSYGIGIDRLLGAIAETKRDERGLLWPPSLAPYRFFLMGIGKGASVR-REVEQLYASISE 494

Query: 581 SIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD---A 637
               D R+E+   K ++  +  IP  I+       E    +    +   + V L D    
Sbjct: 495 DTLIDDRSESPGVKFKDSELMGIPWRIVISASTLEEGRAELYDRRADRRRLVPLADIRSV 554

Query: 638 IPILTKES 645
           +  L +ES
Sbjct: 555 VRALREES 562


>gi|291557497|emb|CBL34614.1| prolyl-tRNA synthetase, family II [Eubacterium siraeum V10Sc8a]
          Length = 574

 Score =  106 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 64/360 (17%), Positives = 124/360 (34%), Gaps = 40/360 (11%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
            +    ++     + +   H  + R   + ++A        +     +I + +   +R +
Sbjct: 4   DKLVGDRFKERPSDCQIDSHAIMVRGGYIKYMA--NGIFSSYTPT-KRITKKIEQIIREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +   D +E+  P V+   LWQ+SG +DS  + +        T ++     L   +    V
Sbjct: 61  MDKIDGQEVQFPVVMPASLWQESGRYDSIGSELLRF-----TDRNRMPMVLGMTHEEAAV 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +     KSY + P  + +  + +R+E      GL+RVR FT  DA+ F T  E +    
Sbjct: 116 HLVREYGKSYTKYPFMIYQIQTKFRDEARPR-GGLIRVREFTMKDAYSFHTSQEDLEQYY 174

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKR------------VGSDALWDDAE---NIMK 449
            K H    +I++  G  +++   S                  VG D +    E   N   
Sbjct: 175 DKCHKAYENIFRRAGVPEVISVKSDSGMMGGSISHEFMLLTPVGEDTIASCHECGFNANM 234

Query: 450 GVLDTIKNSSQDRINTGVLLGEGAFYGPKF----EYILKDAIGRDWQCGTIQVDFNLPSR 505
              D+I  +++D ++  + L     + P      E        ++  C  +    N    
Sbjct: 235 EAADSIIENTRDEVSAPMEL----VHTPNIHTIEEICDFLHTPKEKSCKAVVYQRNADDS 290

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF---KGNLPLWLSPIQAIVTTITS 562
           +    V +  +        R   G       ++ E      G +     P    V   TS
Sbjct: 291 Y--VVVFTRGDIDVNETKLRNFLGCEIHP-AVITEECGLNAGYIGPVGLPENMTVLFDTS 347



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 67/173 (38%), Gaps = 13/173 (7%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFK 543
           +I R  + G I Q+        N  Y++S+ E+  P+M    +   + R    + E +  
Sbjct: 400 SISRGIEVGNIFQLGTKYTKTMNMTYLDSNGEEKTPIMGCYGI--GVGRLAASVCEAHHD 457

Query: 544 GNLPLWL---SPIQAIVTTITSSAVE---YAQEIANLLKSHHLSIETDFRNETINYKIRE 597
              P+W    +P Q  +  + S   +    A ++ N L++    +  D R  +      +
Sbjct: 458 DYGPIWPMPIAPWQVHICAVRSDDADVKACADKLYNTLQNAGAEVIYDDRQVSAGVMFSD 517

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL---DAIPILTKESLP 647
             +  +P+ ++   +   +    I     + + KV +    D +  L KE + 
Sbjct: 518 ADLLGVPLRVVVSPRNLKDNCCEISARDKSFSYKVPVEETADKVQELIKELMA 570


>gi|73920761|sp|Q9JKF7|RM39_MOUSE RecName: Full=39S ribosomal protein L39, mitochondrial;
           Short=L39mt; Short=MRP-L39
          Length = 336

 Score =  106 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 47/230 (20%), Positives = 90/230 (39%), Gaps = 24/230 (10%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPEDPRSLAV---IRHS 76
           +T    A  +S     K++   ++G+  D+  P+ +   I+ +T +DP    V      S
Sbjct: 83  STPYSCAMHLSEWYCSKSILALVDGQPWDMYKPLTKSCEIKFLTFKDPDPKEVNKAYWRS 142

Query: 77  CAHIMAEAVQSIWPEVQV------AIGPIIEDGFYYDFDKEQP-----FSSDELAQIEKK 125
           CA ++   ++  + +  V         P+I   F YD   ++       + + L    K 
Sbjct: 143 CAMMLGCVIERAFKDDYVVSLVRAPEVPVIAGAFCYDVTLDKRLDEWMPTKENLRSFTKD 202

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN---VTLYRQGEWFDL 182
              +I RD PF    +    A E+   +   YKV+ +E   ++     V L+R G++ D+
Sbjct: 203 AHALIYRDLPFETLDVDARVALEI--FQHNKYKVDFIEEKASQNPERIVKLHRIGDFIDV 260

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELT 232
             GP +  T          +V+  +    S   ++ R  G +  T     
Sbjct: 261 SEGPLIPRTS----VCFQYEVSAVHNLNPSQPNLIRRFQGLSLPTHLRAQ 306


>gi|325263840|ref|ZP_08130573.1| phosphoribulokinase family protein [Clostridium sp. D5]
 gi|324030878|gb|EGB92160.1| phosphoribulokinase family protein [Clostridium sp. D5]
          Length = 557

 Score =  106 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 43/200 (21%), Positives = 75/200 (37%), Gaps = 7/200 (3%)

Query: 14  IKNFPVHATGSDVAESISRSLAKKAVAVAING-KVCDLSDPVREGS--IEIITPEDPRSL 70
           IK +    T  ++A         + V V IN  ++ +L   +      IE IT E+    
Sbjct: 14  IKEYTAGITYQEIAREYQDRYEHQIVLVFINQYQLQELDKKLEPDCREIEFITTENRIGY 73

Query: 71  AVIRHSCAHIMAEAVQSIWPEV---QVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQ 127
              + S   ++ +AV  +       +V I   +  G+Y   +     S + L ++ ++MQ
Sbjct: 74  ETYKRSLCFMLVKAVHDVGGHDKVERVRIHFSLSKGYYCTVEGNVKLSQEFLDKVNERMQ 133

Query: 128 EIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPH 187
            ++       K+ +   KA ELF       K E L        V +Y   E+ D   G  
Sbjct: 134 RLVEERIRIEKRSIHTTKAVELFRKHGMYDK-ERLFEYRRVSKVNIYSMNEFEDYYYGYM 192

Query: 188 VRSTGQVKKFFKLMKVAGAY 207
           V   G +K +   +   G  
Sbjct: 193 VPDAGYLKYYSLHLYDEGFI 212


>gi|322818062|gb|EFZ25583.1| prolyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 378

 Score =  106 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 53/301 (17%), Positives = 106/301 (35%), Gaps = 59/301 (19%)

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           + +V R E S      +R R F   + H  + T+E+   E L+I +   ++Y++     +
Sbjct: 2   WNNVIRWEFSHPT-PFIRTREFLWQEGHCAWQTEEECSQEVLEILDHYAAVYEELLAVPV 60

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +    T  EK  G                                     +Y    E  +
Sbjct: 61  VKGRKTEKEKFAGG------------------------------------YYTTTVETYI 84

Query: 484 KDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
             AIGR  Q GT   +  N    FN  + +        ++  +  +G   R IG+M    
Sbjct: 85  -AAIGRGCQGGTSHNLGQNFGKMFNISFQDPEKNDGSTLIPWQNSWGLSTRVIGVMTMVH 143

Query: 543 KGNLPLWLSP----IQAIVTTIT----------SSAVEYAQEIANLLKSHHLSIETDFRN 588
             +  + L P    +Q ++  +            S +E  + +  +L S  +  + D R+
Sbjct: 144 GDDSGMVLPPRVASVQVVIIPVGITKNTTDEERKSLLEGCKTLERVLVSGGIRAKADLRD 203

Query: 589 E-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV----SLLDAIPILTK 643
             +  ++     +K +P+ +  G +E +   I +      + + +     L  A+ +L  
Sbjct: 204 NYSPGWRFNHWEVKGVPVRVELGPRELASLKISLVLRHDGSRRSLLWDKELPTAMTLLMD 263

Query: 644 E 644
           E
Sbjct: 264 E 264


>gi|317138097|ref|XP_001816665.2| prolyl-tRNA synthetase [Aspergillus oryzae RIB40]
          Length = 558

 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 49/317 (15%), Positives = 108/317 (34%), Gaps = 50/317 (15%)

Query: 338 PMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCT 396
           P             +KS+R+LP+R+ ++   +++E +     L+R   +   + H    T
Sbjct: 98  PNAESVIYPYCRKWIKSHRDLPLRMNQWCIRFQHEQNPQ--PLLRSCEYLLQEVHSAHIT 155

Query: 397 KEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIK 456
           K+    E  +I  L   +Y+D     ++              A +    +I  GV+    
Sbjct: 156 KDSARQEAAQILELYSLLYRDLLAIPVVKGYKN---------AAYLQDTDISTGVVIAYI 206

Query: 457 NSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE 516
            ++   I        G      +E  ++D          +                    
Sbjct: 207 PATNQCIEGAKCHEFGQTLSKAYEITVRDPSATAEPAALLH------------------- 247

Query: 517 KCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVE------ 566
                 + +  +    R +G+M+    +N    LP  ++  Q  +    +S+ +      
Sbjct: 248 ------VWQNCWRISIRALGVMVATHSDNHGLVLPPRIAETQVAIVAAQASSTDEQLILD 301

Query: 567 -YAQEIANLLKSHHLSIETDF-RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRF 624
                + + L S  + ++ D     ++ ++  E  +   P+ I+ G  E + + + IRR 
Sbjct: 302 TETDRLVSRLSSAGIRVKVDDLEGYSLGWRFNEWIVSGTPLFIVLGPNEVTNQVVTIRRR 361

Query: 625 GSTTTQKVSLLDAIPIL 641
                +   +  AIP L
Sbjct: 362 DLLHAEG-KVEAAIPEL 377


>gi|83764519|dbj|BAE54663.1| unnamed protein product [Aspergillus oryzae]
          Length = 512

 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 49/317 (15%), Positives = 108/317 (34%), Gaps = 50/317 (15%)

Query: 338 PMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCT 396
           P             +KS+R+LP+R+ ++   +++E +     L+R   +   + H    T
Sbjct: 116 PNAESVIYPYCRKWIKSHRDLPLRMNQWCIRFQHEQNPQ--PLLRSCEYLLQEVHSAHIT 173

Query: 397 KEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIK 456
           K+    E  +I  L   +Y+D     ++              A +    +I  GV+    
Sbjct: 174 KDSARQEAAQILELYSLLYRDLLAIPVVKGYKN---------AAYLQDTDISTGVVIAYI 224

Query: 457 NSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE 516
            ++   I        G      +E  ++D          +                    
Sbjct: 225 PATNQCIEGAKCHEFGQTLSKAYEITVRDPSATAEPAALLH------------------- 265

Query: 517 KCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVE------ 566
                 + +  +    R +G+M+    +N    LP  ++  Q  +    +S+ +      
Sbjct: 266 ------VWQNCWRISIRALGVMVATHSDNHGLVLPPRIAETQVAIVAAQASSTDEQLILD 319

Query: 567 -YAQEIANLLKSHHLSIETDF-RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRF 624
                + + L S  + ++ D     ++ ++  E  +   P+ I+ G  E + + + IRR 
Sbjct: 320 TETDRLVSRLSSAGIRVKVDDLEGYSLGWRFNEWIVSGTPLFIVLGPNEVTNQVVTIRRR 379

Query: 625 GSTTTQKVSLLDAIPIL 641
                +   +  AIP L
Sbjct: 380 DLLHAEG-KVEAAIPEL 395


>gi|195336930|ref|XP_002035086.1| GM14112 [Drosophila sechellia]
 gi|194128179|gb|EDW50222.1| GM14112 [Drosophila sechellia]
          Length = 458

 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 73/414 (17%), Positives = 140/414 (33%), Gaps = 35/414 (8%)

Query: 217 LSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIF 276
           +++       +       +    E   R  + L    +L  +    +G         +  
Sbjct: 1   MNKASRIFCPSLITPKNAVVKQTEQLSRSQKLL---TELGLVKSGSNGTYQIMPMAQRSV 57

Query: 277 QTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFA 335
              I+ ++  ++    ++I  P +    LW+++G  +   +  + V+      +  + F 
Sbjct: 58  DKFINLVQSNMQQAGGQKITLPILTPTGLWKKTGRLEGDISEFYMVRD-----RSGKQFL 112

Query: 336 LKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           + P +     A+       SYR+LP+RL + G  +R+E      GLMR + F   D + F
Sbjct: 113 MSPTHEEAVTAMLATTSPISYRQLPLRLFQIGPKFRDELKTRF-GLMRAKEFLMKDMYSF 171

Query: 395 CTKEQMFNECLKIHNL-IISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
              E+   E   + N     ++K      + V  +T       S      +      +L 
Sbjct: 172 DVSEETARETYSVVNSAYDRLFKQLEVPFVKVNAATGIMGGSVSHEYHYVSSVGEDNLLQ 231

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKF-EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
              +S     N+ V+    +   P      LK+  G +                      
Sbjct: 232 C--SSCGFAGNSEVVKAPAS--CPSCNSSDLKEVRGVEVA----HTFLLEDKYSKPLGAT 283

Query: 513 SHSEKCHPVMIHRAVFGS-IERFIGIMIE----NFKGNLPLWLSPIQAIVT--TITSSAV 565
             +    P  +    +G  I R I   +E    + + + P  L+P  A +      S   
Sbjct: 284 FLNTSGKPQSLVMGCYGIGITRVIAAALEVLSSDHELHWPKLLAPYDACLIGPKQGSKEQ 343

Query: 566 EYAQEIANLLKSH------HLSIETDFRNE-TINYKIREHSIKKIPIIIICGDK 612
             A+ I N L  +      H  +  D R E TI  ++ E      P+ I+ G K
Sbjct: 344 PQAEVIENELLLNVGEICGHQELLHDDRKELTIGKRLLEAKRLGHPLTIVVGAK 397


>gi|154483386|ref|ZP_02025834.1| hypothetical protein EUBVEN_01089 [Eubacterium ventriosum ATCC
           27560]
 gi|149735896|gb|EDM51782.1| hypothetical protein EUBVEN_01089 [Eubacterium ventriosum ATCC
           27560]
          Length = 579

 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 39/198 (19%), Positives = 80/198 (40%), Gaps = 11/198 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++    ++           H  + R   + ++A   +G+        +I Q + + +R +
Sbjct: 4   SKLVGDRFKERPANCLIDSHALMVRGGYIKNVA---NGIYSQFPPMKRISQKIENIIRDE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           +   D +E+  P  L   LW++SG ++S  + +        T +      L   +    V
Sbjct: 61  MDKLDGQEVLFPVALPGSLWEESGRYESVGSELLRF-----TDRTGSKMVLGMTHEEASV 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNEC 404
            +      SY + P  + +  + +R+E      GL+RVR FT  DA+ F T  E +    
Sbjct: 116 QLVREYANSYAKYPFMIYQIQTKFRDEARPR-AGLIRVREFTMKDAYSFHTSQEDLEQYY 174

Query: 405 LKIHNLIISIYKDFGFEK 422
            K+++    I+   G  +
Sbjct: 175 QKVYDAYSRIFARCGIPE 192



 Score = 58.6 bits (140), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 62/164 (37%), Gaps = 11/164 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE----NFK 543
           R  + G I Q+        N  Y + + ++ +P+M    +   + R    + E    ++ 
Sbjct: 403 RGIEVGNIFQLGTKYSKAMNFTYTDENGKEQYPIMGCYGI--GVGRMAASICEVRHDDYG 460

Query: 544 GNLPLWLSPIQAIVTTITSSAVEY---AQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              P+ ++P Q  +  + S   E    A EI   L++  + +  D R         +  +
Sbjct: 461 PIWPITIAPWQVHLCCLRSDDAECKEKADEIYETLQNMGIEVIYDDRKARPGAMFADADL 520

Query: 601 KKIPIIIICGDKEASERSIGIRRFGST-TTQKVSLLDAIPILTK 643
             +P+ ++   +  +E  + I     +   QK  +  A+  +  
Sbjct: 521 LGVPVRVVVSPRNLAENVVEISTRDKSIDKQKTPVDQAVTEVQN 564


>gi|194865182|ref|XP_001971302.1| GG14505 [Drosophila erecta]
 gi|190653085|gb|EDV50328.1| GG14505 [Drosophila erecta]
          Length = 458

 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 68/396 (17%), Positives = 134/396 (33%), Gaps = 33/396 (8%)

Query: 269 HRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
                +     I  ++  + +   ++I  P +    LW+++G  +   +  + V+     
Sbjct: 50  MPMAQRSVDKFIDLVQSNMLQAGGQKITLPILTPTGLWRKTGRLEGDISEFYMVRD---- 105

Query: 328 IKDLRTFALKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
            +  + F + P +     A+       SYR+LP+RL + G  +R+E      GLMR + F
Sbjct: 106 -RSGKQFLMSPTHEEAVTAMLATTSPISYRQLPLRLFQIGPKFRDELKTRF-GLMRAKEF 163

Query: 387 TQDDAHVFCTKEQMFNECLKIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
              D + F   E+   E   + N     ++K      + V  +T       S      + 
Sbjct: 164 LMKDMYSFDVCEETARETYSVVNAAYDRLFKQLEVPFVKVNAATGMMGGSVSHEYHYVSP 223

Query: 446 NIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSR 505
                +L              +         P         +       T  +       
Sbjct: 224 VGEDNLLQCKSCGFAGNSEVVMAPAN----CPSCSSSDLKEVRGVEVAHTFLLGDKYSKP 279

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE----NFKGNLPLWLSPIQAIVT-- 558
             A ++   + K  P  +    +G  I R I   +E    + + + P  L+P    +   
Sbjct: 280 LGATFL---NTKGKPQSLVMGCYGIGITRVIAAALEVLSSDNELHWPKLLAPYDVCLIGP 336

Query: 559 TITSSAVEYAQEIANLLKSH------HLSIETDFRNE-TINYKIREHSIKKIPIIIICGD 611
              S     A+ I N L  +      H  +  D R E TI  ++ E      P+ I+ G 
Sbjct: 337 KQGSKEQPEAEVIENELLLNVGEICGHQELLHDDRKELTIGKRLLEAKRLGHPLTIVVGA 396

Query: 612 KEASERS--IGIRRFGSTTTQKVSLLDAIPILTKES 645
           K   + S  + +      T + + L + + ++ + S
Sbjct: 397 KAIRQDSPKLEVHTSKGETLE-LDLSETLKLVAEHS 431


>gi|323484372|ref|ZP_08089739.1| hypothetical protein HMPREF9474_01490 [Clostridium symbiosum
           WAL-14163]
 gi|323692384|ref|ZP_08106620.1| phosphoribulokinase/uridine kinase [Clostridium symbiosum
           WAL-14673]
 gi|323402366|gb|EGA94697.1| hypothetical protein HMPREF9474_01490 [Clostridium symbiosum
           WAL-14163]
 gi|323503524|gb|EGB19350.1| phosphoribulokinase/uridine kinase [Clostridium symbiosum
           WAL-14673]
          Length = 551

 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 87/232 (37%), Gaps = 5/232 (2%)

Query: 14  IKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAV 72
            + +       ++ +     +    + V+ +GK+ +L   +  +  + +IT  D      
Sbjct: 10  KREYAFGTPFQEIVKDYQEGIENDILLVSADGKLKELHKTLKEDCELRLITAADRAGFLS 69

Query: 73  IRHSCAHIMAEAVQSIWPE---VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
            + S   +M +A   I  +    ++ +   + +G Y + +     + + L +++ +M  +
Sbjct: 70  YQRSALFLMLKAFYDIAGKDNVSKLTVCFSMGNGLYIEPEGALALTRELLDRVKTEMIRL 129

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
           ++ D P LK+  + ++A ELF       K E L        V +Y    + D   G  V+
Sbjct: 130 VSLDLPILKRSENTDEAVELFHLHGMYDK-EKLFYYRRASRVNIYSIENFEDYFYGYMVK 188

Query: 190 STGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           STG +K F   +   G      S +               E+ +      + 
Sbjct: 189 STGYIKYFDLQLYDDGFVLLLPSRKNPKELSALNPRRKLFEVQKESEQWGKK 240


>gi|284054835|ref|ZP_06385045.1| threonyl-tRNA synthetase [Arthrospira platensis str. Paraca]
          Length = 102

 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 16/93 (17%), Positives = 40/93 (43%)

Query: 550 LSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIIC 609
           ++P+   +  ++   + + + +A   +S  +  E D  ++ +   IR     K+P++ + 
Sbjct: 1   MAPVMVRLLPVSDEFLPFVESVAEKWRSLDIRAEADHSHDRLGKMIRNAEKAKVPVMAVV 60

Query: 610 GDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           G KE    S+ IR         +++ +    L 
Sbjct: 61  GAKEVESNSLSIRTRALGELGTLTVAETQSRLQ 93


>gi|118781249|ref|XP_311362.3| AGAP010644-PA [Anopheles gambiae str. PEST]
 gi|116130081|gb|EAA07061.3| AGAP010644-PA [Anopheles gambiae str. PEST]
          Length = 330

 Score =  105 bits (262), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 51/240 (21%), Positives = 102/240 (42%), Gaps = 20/240 (8%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKV-CDLSDPVRE-GSIEIITPEDPR---SLAVIRH 75
           +T  D A  I     +++    ++ K   D+  P+R+  +++++    P    +      
Sbjct: 74  STPYDCARHIGEKYCRQSALALLDNKTPWDMRRPLRDSCTLQLLNFTSPEPHIANKAFWR 133

Query: 76  SCAHIMAEAVQSIW-PEVQVAIG----PIIEDG-FYYDFDKEQPF---SSDELAQIEKKM 126
           SC+ ++   +Q+ + PE  + +     P I+ G F +D    +     +  EL  +  +M
Sbjct: 134 SCSFLLGAVLQASFKPEAGLFLHSFPKPNIKSGSFVHDIVLAEEHWNPTVPELRALSIEM 193

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPA--KENVTLYRQGEWFDLCR 184
            ++  +D P  +  +S E A E+       +K E + S+ A     VT+YR GE  D+ +
Sbjct: 194 IKLSQQDLPIERLDVSSELALEM--FHDNPFKREQIPSVAAQNNGQVTVYRVGEHVDISK 251

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GP + STG + +    +  +     G        R+ G A      +  + Y + E+  R
Sbjct: 252 GPMMGSTGLLGRC--TISASHPIKEGSERGKHFYRMQGVALPAVLRIGHFAYNILENRSR 309


>gi|16741492|gb|AAH16561.1| Mitochondrial ribosomal protein L39 [Mus musculus]
          Length = 297

 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 47/230 (20%), Positives = 90/230 (39%), Gaps = 24/230 (10%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPEDPRSLAV---IRHS 76
           +T    A  +S     K++   ++G+  D+  P+ +   I+ +T +DP    V      S
Sbjct: 44  STPYSCAMHLSEWYCSKSILALVDGQPWDMYKPLTKSCEIKFLTFKDPDPREVNKAYWRS 103

Query: 77  CAHIMAEAVQSIWPEVQV------AIGPIIEDGFYYDFDKEQP-----FSSDELAQIEKK 125
           CA ++   ++  + +  V         P+I   F YD   ++       + + L    K 
Sbjct: 104 CAMMLGCVIERAFKDDYVVSLLRAPEVPVIAGAFCYDVTLDKRLDEWMPTKENLRSFTKD 163

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN---VTLYRQGEWFDL 182
              +I RD PF    +    A E+   +   YKV+ +E   ++     V L+R G++ D+
Sbjct: 164 AHALIYRDLPFETLDVDARVALEI--FQHNKYKVDFIEEKASQNPERIVKLHRIGDFIDV 221

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELT 232
             GP +  T          +V+  +    S   ++ R  G +  T     
Sbjct: 222 SEGPLIPRTS----VCFQYEVSAVHNLNPSQPNLIRRFQGLSLPTHLRAQ 267


>gi|260438479|ref|ZP_05792295.1| phosphoribulokinase family protein [Butyrivibrio crossotus DSM
           2876]
 gi|292809068|gb|EFF68273.1| phosphoribulokinase family protein [Butyrivibrio crossotus DSM
           2876]
          Length = 538

 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 42/169 (24%), Positives = 67/169 (39%), Gaps = 5/169 (2%)

Query: 35  AKKAVAVAINGKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQ 93
               +   +NGK+ +L+  V   S IE +T  DP      + S   I+ +AV  I  +  
Sbjct: 18  KDDIILAKVNGKLQELTKTVDSDSLIEFVTTADPAGNLTYKRSATLILLKAVYDIIDKDM 77

Query: 94  ---VAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELF 150
                +   +  G+Y     +Q  +   +  IE +M+EI+  D P  K  +S   A + F
Sbjct: 78  IEKFKVEFSLSKGYYCTLKGKQKLTVPLIEAIENRMREIVRADIPIEKITMSTGDAIKSF 137

Query: 151 ESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFK 199
              +   K E L        V +Y    + D   G    STG +K F  
Sbjct: 138 AKHRMYDK-ETLFRFRRHSTVNIYSLDGFKDYYYGYMAPSTGYIKYFKL 185


>gi|225711306|gb|ACO11499.1| Mitochondrial 39S ribosomal protein L39 [Caligus rogercresseyi]
          Length = 330

 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 53/232 (22%), Positives = 97/232 (41%), Gaps = 20/232 (8%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI----EIITPEDPRSL-AVIRH 75
           +T  +  + I  SL +++    +N ++ D++ P+ E  I        PEDP  L      
Sbjct: 79  STPFNATQHIQESLLERSALATVNEQLWDMNRPLEEDCIIKFLHFQQPEDPFHLNKAFWR 138

Query: 76  SCAHIMAEAVQSIWP-----EVQVAIGPIIEDG-FYYDFDK---EQPFSSDELAQIEKKM 126
           SC+ ++   +++++      E+     P ++ G F YD D    +   S +EL      M
Sbjct: 139 SCSFMLGATLEALFQEKFYVELHSFPAPNVQSGSFVYDVDLKFCDWTPSKEELMSFSAYM 198

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKV--EILESIPAKENVTLYRQGEWFDLCR 184
             +  R+ PF +  +    A  +FE  +   K    I  +  +  +VTLYR GE  D+  
Sbjct: 199 HRLAERELPFERLVVDASVALRIFEDNQYKTKQIPSIAANSKSGNSVTLYRLGEHVDISG 258

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           GP V ++  + +   +M       R + +   + R  G A      L  + Y
Sbjct: 259 GPMVGNSSFLGRRCSIMAAH----RVEHDGVGMCRFQGVALPKGIFLDHHSY 306


>gi|195129623|ref|XP_002009255.1| GI13938 [Drosophila mojavensis]
 gi|193920864|gb|EDW19731.1| GI13938 [Drosophila mojavensis]
          Length = 332

 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 58/260 (22%), Positives = 108/260 (41%), Gaps = 28/260 (10%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKV-CDLSDPVRE-GS 58
           +P D+ L   +         +T  + A+ +S    K++    I+G V  D+  P++E  +
Sbjct: 64  LPEDVTLVMNNNI-------STPFNCAQHLSEGHCKRSALALIDGSVPWDMHRPLQESCT 116

Query: 59  IEIITPEDPRSL---AVIRHSCAHIMAEAVQSIWP-----EVQVAIGPIIEDG-FYYDFD 109
           ++++                +C+ ++  A+Q ++      ++    GP I+ G F +D  
Sbjct: 117 LQLLNFNVSDPHLVNKAFWRTCSFMLGAALQRVFKQEANLQLHSFPGPNIKSGSFVHDIV 176

Query: 110 K---EQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIP 166
                   +  E+  I  +M ++ A+D    +  +  + A E+F+  +  YK E + SI 
Sbjct: 177 LGVQNWEPTKAEMRAISAEMVKLAAQDLCIERLEVDLDLATEMFKDLR--YKSEQIPSIA 234

Query: 167 AKEN--VTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTA 224
            +    VTLYR G+  D+ RGP V ST  + K   L   A      +       R+ G A
Sbjct: 235 QQHQNRVTLYRLGDHIDISRGPMVASTRFLGKCTVL---AAHKLANEGASDAFYRVQGVA 291

Query: 225 WNTQQELTQYLYFLEESEKR 244
                 L  + Y L E   +
Sbjct: 292 LPAGFALNHFAYGLLEQRAQ 311


>gi|160902880|ref|YP_001568461.1| phosphoribulokinase/uridine kinase [Petrotoga mobilis SJ95]
 gi|160360524|gb|ABX32138.1| phosphoribulokinase/uridine kinase [Petrotoga mobilis SJ95]
          Length = 553

 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 58/241 (24%), Positives = 102/241 (42%), Gaps = 6/241 (2%)

Query: 12  GSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSL 70
           G +     +    D+A+   +S  K  + V  N  + +L   V + GSI+      P  +
Sbjct: 11  GHVYYADENTKFIDIAKKFEKSSGKMVLYVKFNNDIKELFSKVPKSGSIQFCDITTPDGV 70

Query: 71  AVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEII 130
            + R     ++  A++ I PE +  +   + D  Y +F   +P S D L  +E KM+EII
Sbjct: 71  RIYRRGLFFVLYIALKEINPEDKFYVNNTLNDAMYCEFKSGEP-SEDYLLLLENKMREII 129

Query: 131 ARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRS 190
            +D  F K+ +    A ++F    E  K  +L     K  V +Y   ++F+   G    S
Sbjct: 130 EKDIVFEKKTIDKFDAIKMFTDIGEEDKA-LLFKYRKKSTVNIYYADKYFNYFYGYLPYS 188

Query: 191 TGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQ--QELTQYLYFLEESEKRDHRK 248
           TG V KF KL KV   +          + +   +++ +      +Y  +L+  E     +
Sbjct: 189 TGYVNKF-KLKKVEKGFVIIHPTNSFHNFVPDYSYSPKLFATFEEYKNWLDIMEITTVGE 247

Query: 249 L 249
           L
Sbjct: 248 L 248


>gi|238924707|ref|YP_002938223.1| uridine kinase [Eubacterium rectale ATCC 33656]
 gi|238876382|gb|ACR76089.1| uridine kinase [Eubacterium rectale ATCC 33656]
          Length = 579

 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 42/231 (18%), Positives = 82/231 (35%), Gaps = 29/231 (12%)

Query: 4   DIKLTFPDGSIKNFPVHA--TGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIE 60
            +K+T PDG +         T   VA+          +   +NG++ +L+  ++ +  + 
Sbjct: 5   SVKVTLPDGQVMAVTASESDTLEAVADRFKDYYEDDIILGIVNGRLRELNKKIKSDCELS 64

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWP-EVQVAIGPIIEDGFYYDFDK--------- 110
            +T  D       R S   ++  A+  ++    Q+ +   + +G+Y   +K         
Sbjct: 65  FVTTADRDGRRTYRRSVVLLLQRAIYDVYGSMTQLHVMHSLGEGYYCQLEKAVECADSQQ 124

Query: 111 ---------------EQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKE 155
                          E+  +  ++ +I   M   + +D    K     + A +LF+ K  
Sbjct: 125 EKYNEDTDQGSRENSEKSVTEHDIDRIVCSMYTFVEKDLTITKHSAKTQYAEQLFKEKGL 184

Query: 156 AYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGA 206
             K  +L        V LY      D   G    STG +K F  +   +G 
Sbjct: 185 HDKERLL-HYRRSSRVNLYELDGVVDYFYGFMAPSTGMLKYFDIVPYESGF 234


>gi|7271935|gb|AAF44697.1|AF239728_1 unknown [Mus musculus]
          Length = 297

 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 47/230 (20%), Positives = 90/230 (39%), Gaps = 24/230 (10%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPEDPRSLAV---IRHS 76
           +T    A  +S     K++   ++G+  D+  P+ +   I+ +T +DP    V      S
Sbjct: 44  STPYSCAMHLSEWYCSKSILALVDGQPWDMYKPLTKSCEIKFLTFKDPDPKEVNKAYWRS 103

Query: 77  CAHIMAEAVQSIWPEVQV------AIGPIIEDGFYYDFDKEQP-----FSSDELAQIEKK 125
           CA ++   ++  + +  V         P+I   F YD   ++       + + L    K 
Sbjct: 104 CAMMLGCVIERAFKDDYVVSLVRAPEVPVIAGAFCYDVTLDKRLDEWMPTKENLRSFTKD 163

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN---VTLYRQGEWFDL 182
              +I RD PF    +    A E+   +   YKV+ +E   ++     V L+R G++ D+
Sbjct: 164 AHALIYRDLPFETLDVDARVALEI--FQHNKYKVDFIEEKASQNPERIVKLHRIGDFIDV 221

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELT 232
             GP +  T          +V+  +    S   ++ R  G +  T     
Sbjct: 222 SEGPLIPRTS----VCFQYEVSAVHNFNPSQPNLIRRFQGLSLPTHLRAQ 267


>gi|291538408|emb|CBL11519.1| prolyl-tRNA synthetase, family II [Roseburia intestinalis XB6B4]
          Length = 567

 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 37/193 (19%), Positives = 78/193 (40%), Gaps = 11/193 (5%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-D 290
            ++     +     H  + +   + ++A        +     +I   +   +R ++   D
Sbjct: 9   ERFRERPADCVIDSHALMVKGGYMKYMA--NGIYSSYLPL-KRITHKIEQILREEMDKLD 65

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH 350
            +E++ P V+   LW++SG ++S    +      ++         L   +    V +   
Sbjct: 66  GQEVSFPVVMPASLWEESGRYESVGEELLRFTDRNNA-----KMVLGMTHEEAAVHLVRE 120

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHN 409
             KSY + P  + +  + +R+E      GL+RVR FT  DA+ F T ++  N+   K H 
Sbjct: 121 YAKSYNKYPFMIYQIQTKFRDEARPR-AGLIRVREFTMKDAYSFHTSQEDLNQYYEKCHK 179

Query: 410 LIISIYKDFGFEK 422
               I++  G  +
Sbjct: 180 AYERIFERAGIPE 192



 Score = 81.4 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 58/163 (35%), Gaps = 10/163 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNL 546
           R  + G I Q+           YV+ + E   P+M    +   + R    + E +     
Sbjct: 405 RGIEVGNIFQLGDKYTKAMKMTYVDQNGESKTPIMGCYGI--GVGRLAAAVCEAHHDEYG 462

Query: 547 PLWL---SPIQA---IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
           P+W    +P Q     V        ++A ++   L+   + +  D R  +      +  +
Sbjct: 463 PIWPKSIAPWQVHLCAVRADNEEVRKFADDLYEKLQEMGIEVIYDDRTVSAGVMFSDADL 522

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             IP+ +I   +   +  + +     T   +V + +A   + K
Sbjct: 523 LGIPLRVIVSPRNMKQGVVEVASRDKTLQTQVKMEEAAEQVKK 565


>gi|66819305|ref|XP_643312.1| prolyl-tRNA synthetase [Dictyostelium discoideum AX4]
 gi|60471379|gb|EAL69339.1| prolyl-tRNA synthetase [Dictyostelium discoideum AX4]
          Length = 674

 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 34/174 (19%), Positives = 71/174 (40%), Gaps = 8/174 (4%)

Query: 269 HRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
                K+ + +I  +  +++    ++++ P++L + LW+++G WDS   ++  +K     
Sbjct: 93  LPLAQKVMENIIKIIDEEMEKVGGQKMSMPKMLPRELWEKTGRWDSAGDDLIKLKD---- 148

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
            +    + L P +      +  +   S    P++L + G  YR+E      GL+R R FT
Sbjct: 149 -RKGEEYCLAPTHEEVITTIVANESLSNSSFPIKLYQIGEKYRDEVRPRF-GLLRGREFT 206

Query: 388 QDDAHVFCT-KEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
             D + F T KE       ++     +I +        V+  +       S   
Sbjct: 207 MKDMYSFDTSKEAAEITYYQVKQAYHNILERLELPYACVEADSGNIGGNMSHEF 260


>gi|31560438|ref|NP_059100.2| 39S ribosomal protein L39, mitochondrial [Mus musculus]
 gi|12841380|dbj|BAB25185.1| unnamed protein product [Mus musculus]
 gi|15126697|gb|AAH12274.1| Mitochondrial ribosomal protein L39 [Mus musculus]
 gi|26327739|dbj|BAC27613.1| unnamed protein product [Mus musculus]
          Length = 297

 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 47/230 (20%), Positives = 90/230 (39%), Gaps = 24/230 (10%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPEDPRSLAV---IRHS 76
           +T    A  +S     K++   ++G+  D+  P+ +   I+ +T +DP    V      S
Sbjct: 44  STPYSCAMHLSEWYCSKSILALVDGQPWDMYKPLTKSCEIKFLTFKDPDPKEVNKAYWRS 103

Query: 77  CAHIMAEAVQSIWPEVQV------AIGPIIEDGFYYDFDKEQP-----FSSDELAQIEKK 125
           CA ++   ++  + +  V         P+I   F YD   ++       + + L    K 
Sbjct: 104 CAMMLGCVIERAFKDDYVVSLVRAPEVPVIAGAFCYDVTLDKRLDEWMPTKENLRSFTKD 163

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN---VTLYRQGEWFDL 182
              +I RD PF    +    A E+   +   YKV+ +E   ++     V L+R G++ D+
Sbjct: 164 AHALIYRDLPFETLDVDARVALEI--FQHNKYKVDFIEEKASQNPERIVKLHRIGDFIDV 221

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELT 232
             GP +  T          +V+  +    S   ++ R  G +  T     
Sbjct: 222 SEGPLIPRTS----VCFQYEVSAVHNLNPSQPNLIRRFQGLSLPTHLRAQ 267


>gi|218133120|ref|ZP_03461924.1| hypothetical protein BACPEC_00982 [Bacteroides pectinophilus ATCC
           43243]
 gi|217991993|gb|EEC57997.1| hypothetical protein BACPEC_00982 [Bacteroides pectinophilus ATCC
           43243]
          Length = 540

 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 37/190 (19%), Positives = 79/190 (41%), Gaps = 6/190 (3%)

Query: 22  TGSDVAESISRSLAKKAVAVAINGKVCDLS-DPVREGSIEIITPEDPRSLAVIRHSCAHI 80
           T  ++A+          +   ++GK+ +L+   + + ++E IT          R S   +
Sbjct: 6   TLLELAKEEQLKTKDTIILAKVDGKLSELNNWAIEDQNVEFITTATVLGNEAYRRSVLFM 65

Query: 81  MAEAVQSIWPEVQ---VAIGPIIEDGFYYDFDKEQ-PFSSDELAQIEKKMQEIIARDSPF 136
           M  A+  I P++    V +   +  G + +   +    + + + ++++ M E +A+D P 
Sbjct: 66  MLYAIHRIAPDIPGKDVNVQYSLSKGLFCEIKNDACAVNQEFIDKVKQIMCETVAKDVPI 125

Query: 137 LKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKK 196
           +K  +  ++A ++F     + K E L       NV +Y    + D   G    STG +  
Sbjct: 126 IKHVMHTDEAVKVFRKFGMSDK-ERLFRYRRGSNVNVYELEGFMDYYYGYMAPSTGMLSV 184

Query: 197 FFKLMKVAGA 206
           F   +   G 
Sbjct: 185 FDIFLYEDGF 194


>gi|332797142|ref|YP_004458642.1| threonyl-tRNA synthetase editing domain-containing protein
           [Acidianus hospitalis W1]
 gi|332694877|gb|AEE94344.1| threonyl-tRNA synthetase editing domain protein [Acidianus
           hospitalis W1]
          Length = 385

 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 25/101 (24%), Positives = 50/101 (49%)

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
             LPLW+SPI   +  +    +E  +E AN L S  + +E D +++ +  KIR   +  I
Sbjct: 270 PYLPLWISPIHVRLLPVKKDFLEKTEEFANQLLSKGVRVEIDNKDDGLGNKIRRSGMDWI 329

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P + I G++E    ++ +R       + +++ +   ++  E
Sbjct: 330 PYVAIVGEREIKTSTLTVRIRKKDEQKSLTVDELYALIKDE 370


>gi|284931606|gb|ADC31544.1| Prolyl-tRNA synthetase [Mycoplasma gallisepticum str. F]
          Length = 474

 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 67/424 (15%), Positives = 148/424 (34%), Gaps = 58/424 (13%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KD 289
                   +++    + ++  + +L H +     + F    GWKI+Q +   + ++  + 
Sbjct: 4   KKNLASSKDDNISDWYTEVISKGNLIHYSNIKGFMSF-LPNGWKIWQLIKKELTKEFDQR 62

Query: 290 DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
           D  E+  P ++ Q+ +  +  H + +   +F V     T  +   + L+P +      ++
Sbjct: 63  DILELCLPSLISQNDFLLEKKHLEGFAPELFIVT---KTSNETEKYILRPTSEIAFCNLW 119

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNECLKI 407
              L++YR+LP++  ++ SV+R E   +    +R   F   + H  F T+EQ  +  +  
Sbjct: 120 RETLRNYRQLPIKHNQWTSVFRVEK--NTRPFLRNSEFFWHEIHSCFETEEQSNDFAV-- 175

Query: 408 HNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGV 467
                                           +W   +  +K +L     + +    T  
Sbjct: 176 -------------------------------DIWKLYQRFIKDILCIPLVAGEK---TEA 201

Query: 468 LLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
               GA      E I+ D  G+  Q  T   +  N    F+  Y   +++  +   +   
Sbjct: 202 EKFAGAKTTYTVETIMPD--GQALQSATSHNLSQNFSKAFDIRYQTKNNDYQNVFSMSA- 258

Query: 527 VFGSIERFIGIMIENFKGNLPLW-LSPIQAIVTTITSSAVEYAQEIANLLKS------HH 579
             G   R IG +I     N  L   + +     ++     +  QE+   LK         
Sbjct: 259 --GVSTRIIGAIIMTHGDNEGLVFPTKVAPYHISLNCIFDDTNQELNAKLKELANKYSQK 316

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
             +  +    +    I+   ++    +++ G  +  +  I      S   Q ++L     
Sbjct: 317 YRVHLNLNKYSTVEIIKNSQLRGDCCVLLMGPNDLKKNEIVFIDRISKQKQFINLDHLDQ 376

Query: 640 ILTK 643
            L +
Sbjct: 377 KLEE 380


>gi|291550181|emb|CBL26443.1| Uridine kinase [Ruminococcus torques L2-14]
          Length = 579

 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 45/208 (21%), Positives = 84/208 (40%), Gaps = 9/208 (4%)

Query: 6   KLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAING-KVCDLSDPVR-EGSIEIIT 63
           K+T   G    +    +  ++A+   +    +   V ++G ++ +L   V  + ++  IT
Sbjct: 28  KVTI-SGKEYLYEKGTSYQEIAKDFQKEYKHQIALVMLDGHRLQELRKQVSGDCTLRFIT 86

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPE-----VQVAIGPIIEDGFYYDFDKEQPFSSDE 118
            +D       R S   +  +AV  +        V+V I   +  GFY   +       + 
Sbjct: 87  TQDTAGYDTYRRSVCFLFIKAVHDVIGHERPQQVRVRIHFSLGAGFYCTVEGIDHVGMEF 146

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
             ++E++M E++ +  P  K+ +  E+A ELF       K E L       +V LY   E
Sbjct: 147 QWKVEERMYELVQQRLPITKELIHTEEAVELFHRYGMFDK-ERLFRYRRSSHVNLYAMNE 205

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGA 206
           + D   G  +  TG +K F   +   G 
Sbjct: 206 FRDYYYGYMMPDTGDLKYFALYLYQGGI 233


>gi|58332576|ref|NP_001011362.1| mitochondrial ribosomal protein L39 [Xenopus (Silurana) tropicalis]
 gi|56789558|gb|AAH88527.1| mitochondrial ribosomal protein L39 [Xenopus (Silurana) tropicalis]
          Length = 331

 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 51/252 (20%), Positives = 100/252 (39%), Gaps = 28/252 (11%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPEDPRSLAV---IRHS 76
           +T    A  +S     ++V   ++G+V D+  P+ +  +I+ +T +D     V      S
Sbjct: 78  STPYHCALHLSEWYCSRSVLALVDGEVWDMYKPLTKSCNIQFLTFKDEDPEEVNKAYWRS 137

Query: 77  CAHIMAEAVQSIWPEVQV------AIGPIIEDGFYYDF------DKEQPFSSDELAQIEK 124
           CA I+   +++ + E  +         P+I   F YD       D  +P + + L  + +
Sbjct: 138 CAMILGCVLENAFKEEYMVNLIRAPEIPVISGAFCYDVVLDSRLDDWRP-TEENLRSLTR 196

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN---VTLYRQGEWFD 181
           +   +I +D PF    +  E+       +   YK+ + E   ++     VT++R G++ D
Sbjct: 197 EAHSLIHKDLPFESLEV--EEKVAKEIFQHSPYKLIMAEEKASQNPQGLVTVHRFGDFVD 254

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           L  GPH+  T     F +  +V   +   +     + R  G +      L  +       
Sbjct: 255 LTEGPHIPRTS----FCQQYEVTAGHSLANIPSEHVRRFQGLSLP--WHLKAHHTVWNRL 308

Query: 242 EKRDHRKLAREM 253
             R  R +  E 
Sbjct: 309 RTRSQRLVTEEH 320


>gi|226528192|ref|NP_001140354.1| hypothetical protein LOC100272402 [Zea mays]
 gi|194699134|gb|ACF83651.1| unknown [Zea mays]
          Length = 285

 Score =  104 bits (259), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 68/183 (37%), Gaps = 16/183 (8%)

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           G  Y    E  + +  GR  Q  T   +  N    F+   +   +EK    M+ +  +  
Sbjct: 6   GGLYTTSVEAFIPNT-GRGIQGATSHCLGQNFAKMFD---ITFENEKGVREMVWQNSWAY 61

Query: 531 IERFIGIMIENFKGNLPLWL----SPIQAIVTTITSSAVEY------AQEIANLLKSHHL 580
             R IG+M+     +  L L    +PIQ IV  +     +        +     L    +
Sbjct: 62  TTRSIGVMVMTHGDDKGLVLPPKVAPIQVIVIPVPYKDADTTAIKGACESTVYTLDQSGI 121

Query: 581 SIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
             + D R N +  +K     +K +P+ I  G K+ + + + + R  +     + + + + 
Sbjct: 122 RADQDTRENYSPGWKYSHWEMKGVPLRIEIGPKDLANKQVRVVRRDNGAKVDIPVTNLVE 181

Query: 640 ILT 642
            + 
Sbjct: 182 EVK 184


>gi|297707684|ref|XP_002830625.1| PREDICTED: 39S ribosomal protein L39, mitochondrial-like isoform 2
           [Pongo abelii]
          Length = 353

 Score =  104 bits (259), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 47/272 (17%), Positives = 100/272 (36%), Gaps = 26/272 (9%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPEDPRSLAV---IRHS 76
           +T    A  +S    +K++   ++G+  D+  P+ +   I+ +T +D     V      S
Sbjct: 86  STPYSCAMHLSEWYCRKSILALVDGQPWDMYKPLTKSCEIKFLTFKDRDPGEVNKAYWRS 145

Query: 77  CAHIMAEAVQSIWPEVQV------AIGPIIEDGFYYDFDKEQP-----FSSDELAQIEKK 125
           CA IM   ++  + +  +         P+I   F YD   +        + + L    K 
Sbjct: 146 CAMIMGCVIERAFKDEYMVNLVRAPEVPVISGAFCYDVVLDSKLDEWMPTKENLRSFTKD 205

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN---VTLYRQGEWFDL 182
              +I +D PF    +  + A E+   +   YK++ +E   ++     V L+R G++ D+
Sbjct: 206 AHALIYKDLPFETLEVEAKVALEI--FQHNKYKIDFIEEKASQNPERIVKLHRIGDFIDV 263

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
             GP +  T          +V+  +    +   ++ R  G +         +  + +  E
Sbjct: 264 SEGPLIPRTS----ICFQYEVSAVHNLQPTQPSLIRRFQGVSLPV-HLRAHFTIWDKLLE 318

Query: 243 KRDHRKLAREMDLFHIA-EDGSGVIFWHRKGW 273
           +         + LF       +    +   G 
Sbjct: 319 RSRKMTPFPILFLFTTQSFFTTSPESYLLHGT 350


>gi|167768035|ref|ZP_02440088.1| hypothetical protein CLOSS21_02578 [Clostridium sp. SS2/1]
 gi|167710364|gb|EDS20943.1| hypothetical protein CLOSS21_02578 [Clostridium sp. SS2/1]
 gi|291561033|emb|CBL39833.1| Uridine kinase [butyrate-producing bacterium SSC/2]
          Length = 550

 Score =  104 bits (259), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 40/246 (16%), Positives = 93/246 (37%), Gaps = 6/246 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK T  + SI       T SD+A+ +        +   ++GK+ +L  P+ ++  +  +
Sbjct: 1   MIKATV-NQSIYEVKEGTTLSDLAKQVQLPQEPIILLAYMDGKLRELFTPMTKDCHVRFV 59

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPE---VQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           T ++       + +   +  +A + +       ++A+   I +  + DF +++       
Sbjct: 60  TLKEQAGYMAYKRTATLMFLKACEDLLGTGATTKIALDYSIGNSIFCDFLEDRVIDEAFA 119

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             I+K M+E+   + P  K+ L  ++A + F+      K E+ +    +  + +Y    +
Sbjct: 120 RSIQKHMEELAKANLPITKRSLDTDQAAKYFDRIGFKGKKELFQ-FRRESKMNIYSLDGY 178

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            +   G    STG +  F       G   +    +     +  T       + Q      
Sbjct: 179 DNYFYGYMAPSTGYISAFLVSAYQHGVVLQIPKRKQTEEIVPFTPQPKLFHVMQRSREWT 238

Query: 240 ESEKRD 245
           ++   D
Sbjct: 239 KTMGVD 244


>gi|50309671|ref|XP_454847.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49643982|emb|CAG99934.1| KLLA0E19801p [Kluyveromyces lactis]
          Length = 549

 Score =  104 bits (259), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 40/169 (23%), Positives = 74/169 (43%), Gaps = 10/169 (5%)

Query: 253 MDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHW 311
             L ++ +  SGV+ W   G K  + +   +RR++ +    E++   +  + LW+ +G W
Sbjct: 27  QQLGYVKQASSGVLHWLPLGLKTLRNIEGIIRRRMDESGAHEVSLSSLSQRSLWETTGRW 86

Query: 312 DSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRN 371
            +    +F +K A       + + L P        + N  L SY++LP+   +    YR+
Sbjct: 87  SN--TELFKLKDAK-----KKDYCLVPTCEEEITWLMNSYLTSYKDLPIIAYQITRKYRD 139

Query: 372 EPSGSLHGLMRVRGFTQDDAHVFCT-KEQMFNECLKIHNLIISIYKDFG 419
           E      GL+R R F   DA+ F    E   +   +++     I+ D G
Sbjct: 140 ELRPR-GGLLRGREFLMKDAYSFHLNSEDAVSTFERVNATYDKIFTDIG 187



 Score = 44.4 bits (103), Expect = 0.061,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 51/141 (36%), Gaps = 11/141 (7%)

Query: 480 EYILKDAIGRDWQCGTIQVDFNL---PSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFI 535
           E   +   G      +I+V            A       +    V++    +G  + R I
Sbjct: 354 EICAQCEEGELESAKSIEVGHTFYLGKKYSKALNATFRQQDNSDVVMEMGCYGIGVSRLI 413

Query: 536 GIMI----ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           G +     +      P  +SP +  V   +  +V+   ++  LL  +    + D +  +I
Sbjct: 414 GAIAQVTRDPKGLRWPSSVSPYKVSVCA-SDKSVDQLNKVKALL-DYKPYTDFDAKT-SI 470

Query: 592 NYKIREHSIKKIPIIIICGDK 612
             KI++     IPI I+ G K
Sbjct: 471 GAKIQQSHALGIPIAIVVGPK 491


>gi|46108902|ref|XP_381509.1| hypothetical protein FG01333.1 [Gibberella zeae PH-1]
          Length = 548

 Score =  104 bits (259), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 40/182 (21%), Positives = 73/182 (40%), Gaps = 13/182 (7%)

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHL 304
           H KL R   L       SG+      G ++   +   + + +       ++   +  + L
Sbjct: 4   HEKLIRGGFLRQAH---SGIFQLLPLGLRVQDKIEKLIDKHMHSVGASRLSLSTISSEEL 60

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++S   DS    +F +K   DT        L P +      +    + SY++LP+RL +
Sbjct: 61  WRRSNRLDSVAPELFRLKDRKDTP-----LILSPTHEEEITTLVAGIVNSYKDLPIRLYQ 115

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
               YR+E     HGL+R R F   D + F   +   +E ++ +  +   Y+ F  E  +
Sbjct: 116 ITRKYRDERRPR-HGLLRSREFLMKDLYTF---DLTTSEAVETYRQVSGAYRAFFAELKL 171

Query: 425 VK 426
             
Sbjct: 172 PY 173



 Score = 62.9 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/144 (16%), Positives = 51/144 (35%), Gaps = 14/144 (9%)

Query: 511 VNSHSEKCHPVMIHRAVFGS-IERFIG----IMIENFKGNLPLWLSPIQAIVTTITSSAV 565
           V         V +     G  + R  G    I+ +    N P  ++P +  +   ++   
Sbjct: 402 VEEGLTPGSRVPVQMGCHGVGVSRIFGAVAEILADERGLNWPRAIAPFEVTIIP-SNGLA 460

Query: 566 EYAQEIANLLKSH-----HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERS-- 618
           +   +I + L  +        +  D R  +  +K+++  +   P+++I G       +  
Sbjct: 461 DEPLDIYDTLSKNNGSQSGFDVVLDDRKRSFGWKMKDADMVGYPVLVILGKSFKENGTCE 520

Query: 619 IGIRRFGSTTTQKV-SLLDAIPIL 641
           +  RR       KV  L + I  L
Sbjct: 521 VQCRRLSVKDNVKVDELPEFISSL 544


>gi|302348333|ref|YP_003815971.1| Threonyl-tRNA synthetase [Acidilobus saccharovorans 345-15]
 gi|302328745|gb|ADL18940.1| Threonyl-tRNA synthetase [Acidilobus saccharovorans 345-15]
          Length = 468

 Score =  104 bits (259), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 28/95 (29%), Positives = 43/95 (45%)

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
             LP WLSP+Q  V  +    VEYA+ +   L         D   + +  ++R      +
Sbjct: 354 PYLPFWLSPLQVAVIPVKDQHVEYARRLLQDLIDVGARAYLDPPTKGLGARVRAAGKAWV 413

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           PII + GDKE    ++ IRR      Q+V   +A+
Sbjct: 414 PIIAVVGDKEVESNTVNIRRRWLQGQQEVVQAEAL 448


>gi|297287729|ref|XP_001105639.2| PREDICTED: 39S ribosomal protein L39, mitochondrial-like isoform 2
           [Macaca mulatta]
          Length = 360

 Score =  104 bits (258), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 47/266 (17%), Positives = 99/266 (37%), Gaps = 25/266 (9%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPEDPRSLAV---IRHS 76
           +T    A  +S    +K++   ++G+  D+  P+ +   I+ +T +D     V      S
Sbjct: 86  STPYSCAMHLSEWYCRKSILALVDGQPWDMYKPLTKSCEIKFLTFKDRDPGEVNKAYWRS 145

Query: 77  CAHIMAEAVQSIWPEVQV------AIGPIIEDGFYYDFDKEQP-----FSSDELAQIEKK 125
           CA +M   ++  + +  +         P+I   F YD   +        + + L    K 
Sbjct: 146 CAMMMGCVIERAFKDEYMVNLVRAPEVPVISGAFCYDVVLDSKLDEWMPTKENLRSFTKD 205

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN---VTLYRQGEWFDL 182
              +I +D PF    +  + A E+   +   YK++ +E   ++     V L+R G++ D+
Sbjct: 206 AHALIYKDLPFETLEVEAKVALEI--FQHNKYKIDFIEEKASQNPERIVKLHRIGDFIDV 263

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQ-QELTQYLYFLEES 241
             GP +  T          +V+  +    +   ++ R  G +     +        L E 
Sbjct: 264 SEGPLIPRTS----ICFQYEVSAVHNLQPTQPSLIRRFQGVSLPIHLRAHFTIWDKLLER 319

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIF 267
            ++    L+     F      +   F
Sbjct: 320 SRKMVIFLSGLHFPFSFCLFTTQSFF 345


>gi|297664845|ref|XP_002810834.1| PREDICTED: probable prolyl-tRNA synthetase, mitochondrial-like
           [Pongo abelii]
          Length = 436

 Score =  104 bits (258), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 34/186 (18%), Positives = 69/186 (37%), Gaps = 9/186 (4%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I     G         +  + L+  + ++++    +++N P +    LWQ +  WD    
Sbjct: 80  IYPASPGCYHLLPYTVRAMEKLVRVIDQEMQAIGGQKVNMPSLNPAELWQATNRWDLMGK 139

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPSG 375
            +  ++      +  + + L P +     A+     K SY++LP  L +    +R+EP  
Sbjct: 140 ELLRLRD-----RHGKEYCLGPTHEEAITALIASQKKLSYKQLPFLLYQVTRKFRDEPRP 194

Query: 376 SLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              GL+R R F   D + F  + E        + +   S++   G   + V+        
Sbjct: 195 RF-GLLRGREFYMKDMYTFDSSPEAAQQTYSLVCDAYCSLFNRLGLPFVKVQADVGTIGG 253

Query: 435 VGSDAL 440
             S   
Sbjct: 254 TVSHEF 259


>gi|126325359|ref|XP_001374495.1| PREDICTED: similar to mitochondrial ribosomal protein L39
           [Monodelphis domestica]
          Length = 455

 Score =  104 bits (258), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 50/255 (19%), Positives = 97/255 (38%), Gaps = 33/255 (12%)

Query: 19  VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPEDPRSLAV---IR 74
            H+T  + A  +S     K++   ++G+  D++ P+ +   I+ +T +D     V     
Sbjct: 201 NHSTPYNCAMHLSEWYCTKSILALVDGQPWDMNKPLTKSCEIKFLTFKDEDPEEVNKAYW 260

Query: 75  HSCAHIMAEAVQSIWPE------VQVAIGPIIEDGFYYDFDKEQP-----FSSDELAQIE 123
            SCA +M   ++  + +      V+V   P+I   F YD   ++       + ++L    
Sbjct: 261 RSCAMMMGCVIEKAFKDEYTVTLVRVPEIPVIAGAFCYDVILDKRLDEWIPTPEDLRSFT 320

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN---VTLYRQGEWF 180
           K    +I RD PF    +  E    L   +   YK + +E   ++     + L+R G++ 
Sbjct: 321 KDAHVLINRDLPFETLDI--EAKLALEIFQHNKYKAQFIEEKASENPERLIQLHRFGDFV 378

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           D+  GP +  T          +V+  +    +    L R  G +             L  
Sbjct: 379 DVSEGPLISRTS----ICFQYEVSAVHHLPGAQLDHLRRFQGLSLPVH---------LRA 425

Query: 241 SEKRDHRKLAREMDL 255
                H+ L R   +
Sbjct: 426 HHTIWHKLLERSRKI 440


>gi|27820035|gb|AAO25049.1| GM03563p [Drosophila melanogaster]
          Length = 458

 Score =  104 bits (258), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 73/377 (19%), Positives = 134/377 (35%), Gaps = 30/377 (7%)

Query: 253 MDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHW 311
            +L  +    +G         +     I  ++  ++    ++I  P +    LW+++G  
Sbjct: 34  TELGFVKSGSNGTYQIMPMAQRSVDKCIDLVQSNMQQAGGQKITLPILTPTGLWKKTGRL 93

Query: 312 DSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYR 370
           D   +  + V+      +  + F + P +     A+       SYR+LP+RL + G  +R
Sbjct: 94  DGDISEFYMVRD-----RSGKQFLMSPTHEEAVTAMLATTSPISYRQLPLRLFQIGPKFR 148

Query: 371 NEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKDFGFEKIMVKLST 429
           +E      GLMR + F   D + F   E+   E   + N     ++K      + V  +T
Sbjct: 149 DELKTRF-GLMRAKEFLMKDMYSFDVSEETAMETYTVVNAAYDRLFKQLEVPFVKVNAAT 207

Query: 430 RPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF-EYILKDAIG 488
                  S      +      +L    +S     N+ V+    +   P      LK+  G
Sbjct: 208 GIMGGSVSHEYHYVSPVGEDNLLQC--SSCGFAGNSEVVKAPAS--CPSCNSSDLKEVRG 263

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE----NFKG 544
            +    T  +         A ++N+  +    VM    +   I R I   +E    + + 
Sbjct: 264 VEV-AHTFLLGDKYSKPLGATFLNTSGKPQSLVMGCYGI--GITRVIAAALEVLSSDHEL 320

Query: 545 NLPLWLSPIQAIVT--TITSSAVEYAQEIANLLKSH------HLSIETDFRNE-TINYKI 595
             P  L+P    +      S     A+ I N L  +      H  +  D R E TI  ++
Sbjct: 321 RWPKLLAPYDVCLIGPKQGSKEQPEAEVIENELLLNVGEICGHQELLHDDRKELTIGKRL 380

Query: 596 REHSIKKIPIIIICGDK 612
            E      P+ I+ G K
Sbjct: 381 LEAKRLGHPLTIVVGAK 397


>gi|257456039|ref|ZP_05621244.1| phosphoribulokinase family protein [Treponema vincentii ATCC 35580]
 gi|257446562|gb|EEV21600.1| phosphoribulokinase family protein [Treponema vincentii ATCC 35580]
          Length = 512

 Score =  104 bits (258), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 38/174 (21%), Positives = 80/174 (45%), Gaps = 3/174 (1%)

Query: 41  VAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPI 99
           + +N ++  L+  +    +I+ +         + R +   ++A A + ++P++++ +G  
Sbjct: 1   MKVNNELVSLNKMIDVRATIKPVVKGTYDGSNIYRRTLCFLLAAAARKVYPDLRLLVGHS 60

Query: 100 IEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKV 159
               +YY F+     S  +L  IE KM EI+  D P   + +++ +A ELF +  +    
Sbjct: 61  FGYSYYYTFEGAHA-SEIDLKIIEDKMHEIVDADLPIHTKSVAYSEALELFANTNQPDAY 119

Query: 160 EILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSN 213
            +L S  +K  +T+    +++DL   P +   G +K F  +    G   R  S 
Sbjct: 120 RLL-SYNSKPKITINILDDYYDLYFQPLMDRAGYLKVFGLMKYEDGFLLRFPST 172


>gi|27886570|ref|NP_542984.2| 39S ribosomal protein L39, mitochondrial isoform b [Homo sapiens]
 gi|119630386|gb|EAX09981.1| mitochondrial ribosomal protein L39, isoform CRA_c [Homo sapiens]
          Length = 353

 Score =  104 bits (258), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 46/269 (17%), Positives = 97/269 (36%), Gaps = 29/269 (10%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPEDPRSLAV---IRHS 76
           +T    A  +S    +K++   ++G+  D+  P+ +   I+ +T +D     V      S
Sbjct: 86  STPYSCAMHLSEWYCRKSILALVDGQPWDMYKPLTKSCEIKFLTFKDCDPGEVNKAYWRS 145

Query: 77  CAHIMAEAVQSIWPEVQV------AIGPIIEDGFYYDFDKEQP-----FSSDELAQIEKK 125
           CA +M   ++  + +  +         P+I   F YD   +        + + L    K 
Sbjct: 146 CAMMMGCVIERAFKDEYMVNLVRAPEVPVISGAFCYDVVLDSKLDEWMPTKENLRSFTKD 205

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN---VTLYRQGEWFDL 182
              +I +D PF    +  + A E+   +   YKV+ +E   ++     V L+R G++ D+
Sbjct: 206 AHALIYKDLPFETLEVEAKVALEI--FQHSKYKVDFIEEKASQNPERIVKLHRIGDFIDV 263

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQEL-----TQYLYF 237
             GP +  T          +V+  +    +   ++ R  G +             + L  
Sbjct: 264 SEGPLIPRTS----ICFQYEVSAVHNLQPTQPSLIRRFQGVSLPVHLRAHFTIWDKLLER 319

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVI 266
             +        L      F  + +   + 
Sbjct: 320 SRKMTPFPILLLFTTQSFFTTSPESYLLH 348


>gi|322785635|gb|EFZ12290.1| hypothetical protein SINV_15907 [Solenopsis invicta]
          Length = 343

 Score =  104 bits (258), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 50/232 (21%), Positives = 91/232 (39%), Gaps = 22/232 (9%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAV---IRHS 76
           +T  D A  IS S+AK +   ++N +V D+  P      ++++T + PR   +      +
Sbjct: 89  STPYDCARHISESVAKMSAIASVNDQVWDMHRPFTGNCELQLMTMQSPRLRQINSAFWRT 148

Query: 77  CAHIMAEAVQSIWPE------VQVAIGPIIEDGFYYDFDKEQP---FSSDELAQIEKKMQ 127
           C+ I+     S + +          I  I    F YD   + P    +  EL  +     
Sbjct: 149 CSLILGAVADSAFKDNVNVHLHSFPIPIITSGSFTYDVFIDLPDWRPTESELRAMSALFV 208

Query: 128 EIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK---ENVTLYRQGEWFDLCR 184
           ++  R+    +  +       L   +   +K E + +I      + VTLYR G+  D+ +
Sbjct: 209 KLTNRELLLERLEVPCS--IALNMFQDNPFKSEQIPNIAKDSDNDMVTLYRMGDHVDISK 266

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           GP V ++G + +      V+  +   D     L R  G A      L  + Y
Sbjct: 267 GPMVGNSGLIGRV----TVSAIHRLTDGPVDGLYRFQGIALPKGILLNHFAY 314


>gi|300853486|ref|YP_003778470.1| hypothetical protein CLJU_c02840 [Clostridium ljungdahlii DSM
           13528]
 gi|300433601|gb|ADK13368.1| Conserved hypothetical protein containing an uridine kinase domain
           [Clostridium ljungdahlii DSM 13528]
          Length = 564

 Score =  103 bits (257), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 42/225 (18%), Positives = 87/225 (38%), Gaps = 2/225 (0%)

Query: 17  FPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPEDPRSLAVIRH 75
                +   +            V   +N +  +L++ + + G+ +I+   D         
Sbjct: 29  VKKGTSLYKIFRDNYPVQDIPVVLAKVNEEYFELTNLLEKSGTFKIVDIRDKLGNKTYAR 88

Query: 76  SCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSP 135
           +   ++ ++V  ++   +V I   +  G + +  K+ P   +++ +I+KKM+EII +D P
Sbjct: 89  TLQFVLIKSVYDLFKGAKVTIEHSLSKGIFGEIHKDTPLCEEDIKKIKKKMKEIIKQDIP 148

Query: 136 FLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVK 195
             K  ++ E+A E+F +     KV +L  +   E V LY     +D   G    STG +K
Sbjct: 149 IKKVGMTKERAIEIFRNYGMEDKVRLLNYVNTDE-VKLYELDGRYDYFYGSMAFSTGVLK 207

Query: 196 KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
            F  +    G   R        +      +    ++         
Sbjct: 208 VFDLMYYEPGFILRYPVESDPYNLPKFVEYKKLSKIFYETEKWGN 252


>gi|195440008|ref|XP_002067851.1| GK12501 [Drosophila willistoni]
 gi|194163936|gb|EDW78837.1| GK12501 [Drosophila willistoni]
          Length = 461

 Score =  103 bits (257), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 67/415 (16%), Positives = 138/415 (33%), Gaps = 36/415 (8%)

Query: 217 LSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIF 276
           ++R     W    +    +    E   R  + L    +L  I    +G         +  
Sbjct: 1   MNRASKIFWPMLVKPKDAVIKQTEQLSRSQKLL---TELGLIKSGSNGTYQIMPIAQRSL 57

Query: 277 QTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFA 335
              I+ +++ + +   ++I  P +    LW++SG  +   +  + V+      +  + F 
Sbjct: 58  DKCINLVQQNMVEAGGQKITLPVLTSTALWKKSGRLEGDISEFYMVRD-----RSGKQFL 112

Query: 336 LKPMNCPGHVAVFNHG-LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           + P +     A+       SYR+LP+RL + G  +R+E      G+MR + F   D + F
Sbjct: 113 MSPTHEEAVTAMLATAAPISYRQLPLRLYQIGPKFRDELKSRF-GMMRAKEFLMKDMYTF 171

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV--GSDAL-WDDAENIMKGV 451
              +         +++I   Y  F  +  +  +    E  +  GS +  +    ++ +  
Sbjct: 172 ---DLSQETAKDTYDIITKAYDRFFQQLEVPFVKVNAETGIMGGSLSHEYHYISSVGEDT 228

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
           L   ++      N  V         P       D + +                      
Sbjct: 229 LVKCESCGFAG-NAEVFHQSSN--CPNC--QKADNLSQVHGVEVAHTFLLGDKYSKPLGA 283

Query: 512 NSHSEKCHPVMIHRAVFGS-IERFIGIMIE----NFKGNLPLWLSPIQAIVTTITSSAVE 566
              +    P  +    +G  + R +   +E    + +   P  L+P    V      + E
Sbjct: 284 TFLNTSGKPQSLIMGCYGIGLSRVLAASLEVLSTDQELRWPKLLAPYDVCVIGPKQGSKE 343

Query: 567 Y--AQEIANLLKSH-----HLS-IETDFR-NETINYKIREHSIKKIPIIIICGDK 612
              A+ +   L  H         +  D R + TI  ++ +      P II+ G K
Sbjct: 344 QTLAERVEYNLLEHLGDICGSDEVLHDDRKDLTIGKRLLDGKRLGHPFIIVAGAK 398


>gi|332017449|gb|EGI58172.1| 39S ribosomal protein L39, mitochondrial [Acromyrmex echinatior]
          Length = 316

 Score =  103 bits (257), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 49/232 (21%), Positives = 94/232 (40%), Gaps = 22/232 (9%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAV---IRHS 76
           +T  D A  IS S+AK +    ++ +V D+  P   +  +++IT + PR   V      +
Sbjct: 59  STPYDCARHISESVAKMSAIALVDNQVWDMHRPFTGDCELQLITMQSPRIRMVNYAFWRT 118

Query: 77  CAHIMAEAVQSIWPE------VQVAIGPIIEDGFYYDFDKEQP---FSSDELAQIEKKMQ 127
           C+ I+     S + +          I  I    F YD   + P    ++ EL  +     
Sbjct: 119 CSLILGAVADSAFKDNINLHLYSFPIPNITSGSFTYDVFVDLPDWRPTNSELCAMSALFV 178

Query: 128 EIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESI---PAKENVTLYRQGEWFDLCR 184
           ++  R+    +  +    A ++   +   +K + + +I      + VTLYR G+  D+ +
Sbjct: 179 KLKNRELLLERLEVPSSIALDM--FQDNPFKSQQIPNIAKNSNNDRVTLYRMGDHVDISK 236

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           GP V ++  V +      V+  +   + +   L R  G A      L  + Y
Sbjct: 237 GPMVGNSDLVGRV----TVSAIHRLTNGSTDGLYRFQGIALPKGILLNHFAY 284


>gi|331657698|ref|ZP_08358660.1| threonyl-tRNA synthetase (Threonine--tRNA ligase)(ThrRS)
          [Escherichia coli TA206]
 gi|331055946|gb|EGI27955.1| threonyl-tRNA synthetase (Threonine--tRNA ligase)(ThrRS)
          [Escherichia coli TA206]
          Length = 79

 Score =  103 bits (257), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 24 SDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMA 82
           DVA  I   LAK  +A  +NG++ D  D +  +  + IIT +D   L +IRHSCAH++ 
Sbjct: 1  MDVALDIGPGLAKACIAGRVNGELVDACDLIENDAQLSIITAKDEEGLEIIRHSCAHLLG 60

Query: 83 EAVQSIWPEVQVAIGP 98
           A++ +WP  ++AIGP
Sbjct: 61 HAIKQLWPHTKMAIGP 76


>gi|218132358|ref|ZP_03461162.1| hypothetical protein BACPEC_00217 [Bacteroides pectinophilus ATCC
           43243]
 gi|217992696|gb|EEC58698.1| hypothetical protein BACPEC_00217 [Bacteroides pectinophilus ATCC
           43243]
          Length = 578

 Score =  103 bits (257), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 34/168 (20%), Positives = 67/168 (39%), Gaps = 8/168 (4%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
           +I    +G+        +I Q +   +R ++     +E+  P  L   LW++SG + S  
Sbjct: 31  YIKYVANGIYSLFPPMRRITQKIEKIIREEMDSVGCQEVLFPVTLPSSLWEESGRYQSVG 90

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
             +   K      ++     L   +    V +     +SY   P  + +  + +R+E   
Sbjct: 91  DELLRFKD-----RNGSQMVLGMTHEEAAVHLVREYGRSYARYPFSIYQIQTKFRDEARP 145

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFEK 422
              GL+RVR FT  DA+ F   ++   +   ++ N    I+   G  +
Sbjct: 146 R-AGLIRVREFTMKDAYSFHLTQKSLEDYYQQMANSYNRIFAKVGIPE 192



 Score = 75.2 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/165 (20%), Positives = 64/165 (38%), Gaps = 10/165 (6%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKG 544
           I R  + G I Q+           YV+++ E+  P+M    +   I R    + E +   
Sbjct: 402 ISRGIEVGNIFQLGTKYSDAMGLKYVDTNGEEKVPIMGCYGI--GIGRLAASICEAHHDD 459

Query: 545 NLPLWL---SPIQAIVTTITSSAVEYAQ---EIANLLKSHHLSIETDFRNETINYKIREH 598
             P+W    +P Q  +  + +  +E  +    I N L+S ++ +  D R  +      + 
Sbjct: 460 YGPIWPISVAPWQVHICCMRADKIECKEVTDRIYNELQSSNVEVLYDDRKVSAGVMFSDA 519

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +  IPI II G K   +  + I        + V +   +  + +
Sbjct: 520 DLLGIPIRIIAGPKNIEQGKVEILTRNKAVKKLVDIDSVVEEVGE 564


>gi|125980520|ref|XP_001354284.1| GA11463 [Drosophila pseudoobscura pseudoobscura]
 gi|54642590|gb|EAL31337.1| GA11463 [Drosophila pseudoobscura pseudoobscura]
          Length = 462

 Score =  103 bits (257), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 66/396 (16%), Positives = 133/396 (33%), Gaps = 33/396 (8%)

Query: 269 HRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
                +     I  +   +K    ++I+ P +    LW+++G  +   +  + V+     
Sbjct: 50  MPIAQRSVDKFIDLVDGNMKRAGGQKISLPILTPTGLWKKTGRLEGDISEFYMVRD---- 105

Query: 328 IKDLRTFALKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
            +  + F + P +     A+       SYR++P+RL + G  +R+E      GLMR + F
Sbjct: 106 -RSGKQFLMSPTHEEAVTAMLATTAPISYRQMPLRLYQIGPKFRDELKSRF-GLMRAKEF 163

Query: 387 TQDDAHVFCTKEQMFNECLKIH-NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
              D + F   E+       +       ++K      + V  +T       S      + 
Sbjct: 164 LMKDMYTFDVSEETARGTYSVVSEAYDRLFKQLEVPFVKVNAATGMMGGSLSHEYHYVSP 223

Query: 446 NIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF-EYILKDAIGRDWQCGTIQVDFNLPS 504
                +L                  E +   P      L    G +    T  +      
Sbjct: 224 VGEDTLLQCSSCGYAGNAEVLDSKVEASTDCPSCHSSHLSQVRGVEV-AHTFLLGEKYSK 282

Query: 505 RFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE----NFKGNLPLWLSPIQAIVT-- 558
              A ++N+  +    VM    +   I R +   +E      +   P  L+P    +   
Sbjct: 283 PLGATFLNTSGKPQSLVMGCYGI--GITRVLASALEVLSTEQELRWPKLLAPYDVCLIGP 340

Query: 559 TITSSAVEYAQEIANLLKSH------HLSIETDFRNE-TINYKIREHSIKKIPIIIICGD 611
              S   + A+ I N L  H         +  D R E TI  ++ +      P+ I+ G 
Sbjct: 341 KQGSKEQQPAEVIENELLQHIGKICGDQELLHDDRKELTIGKRLLDAKRLGHPLTIVVGA 400

Query: 612 ----KEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
               +EA +  + +         ++ + DA+ ++ +
Sbjct: 401 TAVQQEAPKLELHV---SGGEKMELEINDALKLVAE 433


>gi|289741267|gb|ADD19381.1| mitochondrial ribosomal protein L39 [Glossina morsitans morsitans]
          Length = 329

 Score =  103 bits (257), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 55/233 (23%), Positives = 103/233 (44%), Gaps = 23/233 (9%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKV-CDLSDPVR-EGSIEII--TPEDPRS-LAVIRH 75
           +T  + A+ +S    K++V   ++G V  D+  P++   +++++  T  DP         
Sbjct: 75  STPYNCAQHLSEGHCKRSVLSLVDGNVPWDMHRPLQASCTLQLLHFTVSDPHVVNKTFWR 134

Query: 76  SCAHIMAEAVQSIWPE-----VQVAIGPIIEDG-FYYDF---DKEQPFSSDELAQIEKKM 126
           SC+ ++  A+Q+ + E     +    GP I+ G F +D     ++   +  EL  +  +M
Sbjct: 135 SCSFMLGAALQNAFKEEAHLQLHSFPGPNIKTGSFIHDIVLGSRDWQPTKSELRALSAEM 194

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK--ENVTLYRQGEWFDLCR 184
            ++ A+D  F +  ++ E A E+F+  +  YK E L SI  +    + LYR G   D+ +
Sbjct: 195 LKLAAQDLKFERLEVNQELALEMFKDCR--YKKEQLPSISQQNRGRIVLYRMGTHIDISK 252

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDS-NRPMLSRIYGTAWNTQQELTQYLY 236
           GP +       +F     VA  +   D      L R+ G A      +    Y
Sbjct: 253 GPMIS----FSRFVGRCTVAAIHKLADEGEHDALYRVQGIALPPAFVINHVAY 301


>gi|317498372|ref|ZP_07956667.1| phosphoribulokinase/Uridine kinase [Lachnospiraceae bacterium
           5_1_63FAA]
 gi|316894266|gb|EFV16453.1| phosphoribulokinase/Uridine kinase [Lachnospiraceae bacterium
           5_1_63FAA]
          Length = 550

 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 40/246 (16%), Positives = 93/246 (37%), Gaps = 6/246 (2%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
            IK T  + SI       T SD+A+ +        +   ++GK+ +L  P+ ++  +  +
Sbjct: 1   MIKATV-NQSIYEVKEGTTLSDLAKQVQLPQEPIILLAYMDGKLRELFTPMTKDCHVRFV 59

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPE---VQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
           T ++       + +   +  +A + +       ++A+   I +  + DF +++       
Sbjct: 60  TLKEQAGYMAYKRTATLMFLKACEDLLGTGATTKIALDYSIGNSIFCDFLEDRVIDDAFA 119

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
             I+K+M+E+   + P  K+ L  ++A + F+      K E+ +    +    +Y    +
Sbjct: 120 QSIQKRMEELAKANLPITKRSLDTDQAAKYFDRIGLKGKKELFQ-FRRESKTNIYSLDGY 178

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
            +   G    STG +  F       G   +    +     +  T       + Q      
Sbjct: 179 DNYFYGYMAPSTGYIPAFLVSAYQHGVVLQIPKRKQTEEIVPFTPQPKLFHVMQRSREWT 238

Query: 240 ESEKRD 245
           ++   D
Sbjct: 239 KTMGVD 244


>gi|24656200|ref|NP_647737.1| Prolyl-tRNA synthetase [Drosophila melanogaster]
 gi|7292265|gb|AAF47674.1| Prolyl-tRNA synthetase [Drosophila melanogaster]
          Length = 458

 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 70/361 (19%), Positives = 129/361 (35%), Gaps = 30/361 (8%)

Query: 269 HRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
                +     I  ++  ++    ++I  P +    LW+++G  D   +  + V+     
Sbjct: 50  MPMAQRSVDKCIDLVQSNMQQAGGQKITLPILTPTGLWKKTGRLDGDISEFYMVRD---- 105

Query: 328 IKDLRTFALKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
            +  + F + P +     A+       SYR+LP+RL + G  +R+E      GLMR + F
Sbjct: 106 -RSGKQFLMSPTHEEAVTAMLATTSPISYRQLPLRLFQIGPKFRDELKTRF-GLMRAKEF 163

Query: 387 TQDDAHVFCTKEQMFNECLK-IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
              D + F   E+   E    ++     ++K      + V  +T       S      + 
Sbjct: 164 LMKDMYSFDVSEETAMETYTLVNAAYDRLFKQLEVPFVKVNAATGIMGGSVSHEYHYVSP 223

Query: 446 NIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF-EYILKDAIGRDWQCGTIQVDFNLPS 504
                +L    +S     N+ V+    +   P      LK+  G +    T  +      
Sbjct: 224 VGEDNLLQC--SSCGFAGNSEVVKAPAS--CPSCNSSDLKEVRGVEV-AHTFLLGDKYSK 278

Query: 505 RFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE----NFKGNLPLWLSPIQAIVT-- 558
              A ++N+  +    VM    +   I R I   +E    + +   P  L+P    +   
Sbjct: 279 PLGATFLNTTGKPQSLVMGCYGI--GITRVIAAALEVLSSDHELRWPKLLAPYDVCLIGP 336

Query: 559 TITSSAVEYAQEIANLLKSH------HLSIETDFRNE-TINYKIREHSIKKIPIIIICGD 611
              S     A+ I N L  +      H  +  D R E TI  ++ E      P+ I+ G 
Sbjct: 337 KQGSKEQPEAEVIENELLLNVGEICGHQELLHDDRKELTIGKRLLEAKRLGHPLTIVVGA 396

Query: 612 K 612
           K
Sbjct: 397 K 397


>gi|159900080|ref|YP_001546327.1| prolyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
 gi|226701298|sp|A9B562|SYP_HERA2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|159893119|gb|ABX06199.1| prolyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
          Length = 566

 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 38/180 (21%), Positives = 69/180 (38%), Gaps = 10/180 (5%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
            E+E   H+ + R      +    +G +     G ++F+ + + M  ++      E  TP
Sbjct: 16  SEAELAAHQLILRAGLARQL---LAGGMALLPLGMRVFRRIEAIMHAELAAIGAGEFRTP 72

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            V    LW+Q+G +  Y   M          ++ +     P +      +    + SYR+
Sbjct: 73  VVHAASLWEQTGRYAQYGEAMLRF-----NNRNQQALLFAPTHEEAVAELARREVDSYRQ 127

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP  L +  + YR+E      GL+R+R FT  DA+   T     +       L      +
Sbjct: 128 LPSLLYQIHTKYRDELR-VRGGLLRLREFTMLDAYSLDTDWAGLDMVYDRVALAFETIFE 186



 Score = 86.8 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 26/165 (15%), Positives = 69/165 (41%), Gaps = 9/165 (5%)

Query: 486 AIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFK 543
           ++ R  + G I  +         A Y++   +   P+++     G +ER + ++IE +  
Sbjct: 399 SLERGIEIGHIFKLGTRYTEALGATYLDPQGQAQ-PIVMGSYGIG-LERLLQVIIEQHHD 456

Query: 544 GNLPLWLSPIQA-----IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
               +W + +       +    +++  E A ++   L    LS+  D RNE+   K  + 
Sbjct: 457 EKGIVWPASVAPFDLHLVQLGASATVSEAANQLYQQLSEAGLSVLYDDRNESAGVKFNDA 516

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +  +P+ +  G++   +  + +R+  +   + ++L   +  +  
Sbjct: 517 DLLGMPLRLTVGERGLKQNVVELRQRATGVVETIALDQVVKSIKN 561


>gi|238600099|ref|XP_002395053.1| hypothetical protein MPER_04961 [Moniliophthora perniciosa FA553]
 gi|215465118|gb|EEB95983.1| hypothetical protein MPER_04961 [Moniliophthora perniciosa FA553]
          Length = 127

 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 27/114 (23%), Positives = 55/114 (48%), Gaps = 7/114 (6%)

Query: 43  INGKVCDLSDPVRE-GSIEIITPEDPRSLA----VIRHSCAHIMAEAVQSIWPEVQVAIG 97
           ++G++ DL  P+     +E++  E P        V  HS AH++ EA +  +    + +G
Sbjct: 1   VDGELWDLERPLESSCKLELLDFEHPEGRRTGKRVFWHSSAHVLGEAAERHY-GCHLCLG 59

Query: 98  PIIEDGFYYDF-DKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELF 150
           P  +DGF+Y+   +++P    +   +EK  +  +     F +  +S E   ++F
Sbjct: 60  PPTDDGFFYEMGIQDRPVVEADYPALEKLSEMAVKDKQKFERLVVSKEDLLKMF 113


>gi|167749838|ref|ZP_02421965.1| hypothetical protein EUBSIR_00806 [Eubacterium siraeum DSM 15702]
 gi|167657150|gb|EDS01280.1| hypothetical protein EUBSIR_00806 [Eubacterium siraeum DSM 15702]
          Length = 589

 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 63/355 (17%), Positives = 123/355 (34%), Gaps = 40/355 (11%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-D 290
            ++     + +   H  + R   + ++A        +     +I + +   +R ++   D
Sbjct: 24  DRFKERPSDCQIDSHAIMVRGGYIKYMA--NGIFSSYAPT-KRITKKIEQIIREEMDKID 80

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH 350
            +E+  P V+   LWQ+SG ++S  + +        T ++     L   +    V +   
Sbjct: 81  GQEVQFPVVMPASLWQESGRYESIGSELLRF-----TDRNRMPMVLGMTHEEAAVHLVRE 135

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHN 409
             KSY + P  + +  + +R+E      GL+RVR FT  DA+ F T  E +     K H 
Sbjct: 136 YGKSYTKYPFMIYQIQTKFRDEARPR-GGLIRVREFTMKDAYSFHTSQEDLEQYYDKCHK 194

Query: 410 LIISIYKDFGFEKIMVKLSTRPEKR------------VGSDALWDDAE---NIMKGVLDT 454
              +I++  G  +++   S                  VG D +    E   N      D+
Sbjct: 195 AYENIFRRAGVPEVISVKSDSGMMGGSISHEFMLLTPVGEDTIASCHECGFNANMEAADS 254

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKF----EYILKDAIGRDWQCGTIQVDFNLPSRFNAFY 510
           I  +++D ++  + L     + P      E        ++  C  +    N    +    
Sbjct: 255 IIENTRDEVSAPMEL----VHTPNIHTIEEICDFLHTPKEKSCKAVVYQRNADDSY--VV 308

Query: 511 VNSHSEKCHPVMIHRAVFGSIERFIGIMIENF---KGNLPLWLSPIQAIVTTITS 562
           V +  +        R   G       ++ E      G +     P    V   TS
Sbjct: 309 VFTRGDIDVNETKLRNFLGCEIHP-AVITEECGLNAGYIGPVGLPENMTVLFDTS 362



 Score = 75.2 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 29/173 (16%), Positives = 66/173 (38%), Gaps = 13/173 (7%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFK 543
           +I R  + G I Q+           Y++S+ E+  P+M    +   + R    + E +  
Sbjct: 415 SISRGIEVGNIFQLGTKYTKTMGMTYLDSNGEEKTPIMGCYGI--GVGRLAASVCEAHHD 472

Query: 544 GNLPLWL---SPIQAIVTTITSSAVE---YAQEIANLLKSHHLSIETDFRNETINYKIRE 597
              P+W    +P Q  +  + S   +    A ++ + L++    +  D R  +      +
Sbjct: 473 DYGPIWPMPIAPWQVHICAVRSDDADVKACADKLYDTLQNAGAEVIYDDRQVSAGVMFSD 532

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL---DAIPILTKESLP 647
             +  +P+ ++   +   +    I     + + KV +    D +  L KE + 
Sbjct: 533 ADLLGVPLRVVVSPRNLKDNCCEISARDKSFSYKVPVEETADKVQELIKELMA 585


>gi|332229345|ref|XP_003263850.1| PREDICTED: 39S ribosomal protein L39, mitochondrial isoform 2
           [Nomascus leucogenys]
          Length = 353

 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 46/272 (16%), Positives = 101/272 (37%), Gaps = 26/272 (9%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPEDPRSLAV---IRHS 76
           +T    A  +S    +K++   ++G+  D+  P+ +   I+ +T +D     V      S
Sbjct: 86  STPYSCAMHLSEWYCRKSILALVDGQPWDMYKPLTKSCEIKFLTFKDRDPGEVNKAYWRS 145

Query: 77  CAHIMAEAVQSIWPEVQV------AIGPIIEDGFYYDFDKEQP-----FSSDELAQIEKK 125
           CA +M   ++  + +  V         P+I   F YD   +        + + L    K 
Sbjct: 146 CAMMMGCVIERAFKDEYVVNLVRAPEVPVISGAFCYDVVLDSKLDEWMPTKENLRSFTKD 205

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN---VTLYRQGEWFDL 182
              +I +D PF    +  + A E+   +   YK++ +E   ++ +   + L+R G++ D+
Sbjct: 206 AHALIYKDLPFETLEVEAKVALEI--FQHNKYKIDFIEEKASQNSERIIKLHRIGDFIDV 263

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
             GP +  T          +V+  +    +   ++ R  G +         +  + +  E
Sbjct: 264 SEGPLIPRTS----ICFQYEVSAVHNLQPTQPSLIRRFQGVSLPV-HLRAHFTIWDKLLE 318

Query: 243 KRDHRKLAREMDLFHIA-EDGSGVIFWHRKGW 273
           +         + LF       +    +   G 
Sbjct: 319 RSRKMTPFPILFLFTTQSFFTTSPESYLLHGT 350


>gi|332830463|gb|EGK03091.1| hypothetical protein HMPREF9455_01341 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 574

 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 50/257 (19%), Positives = 92/257 (35%), Gaps = 5/257 (1%)

Query: 1   MPSDIKLTFPD-GSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-S 58
           M + + +   +  S KNFPV  +  D+ +  S       V   +N K   L        +
Sbjct: 19  MENKVTIHCTNTDSYKNFPVGTSLIDILKGFSLKTEFPVVNARVNNKTEPLDYQAYHNKT 78

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYY-DFDKEQPFSSD 117
           +  +   +P  +     S   ++A+AV  I+PE Q+ I   I  G++    +        
Sbjct: 79  VTFVELTEPSGMRTYVRSLCFLLAKAVSEIFPEGQLYIEHPISLGYFCRIINISSVIDQA 138

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
            +  I+ K+QE I  D  F        +  ++F  +    K  +LE+   +     YR G
Sbjct: 139 AIESIKAKIQEYIDADMRFEGVEEETVQVVKMFRERGFEDKAILLET-SGEMYSKYYRLG 197

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQE-LTQYLY 236
           +  D   G  V S G +  +  L+   G   R  +    +                ++L 
Sbjct: 198 DSVDYFYGCLVPSAGYIDIYDLLLYNDGLLLRVPNRSNPVELEPVIEQPKMYNVYKEHLK 257

Query: 237 FLEESEKRDHRKLAREM 253
           FL      +   + +  
Sbjct: 258 FLNIIGLDNVGDMNKAN 274


>gi|311893995|dbj|BAJ26403.1| putative prolyl-tRNA synthetase [Kitasatospora setae KM-6054]
          Length = 556

 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 42/156 (26%), Positives = 64/156 (41%), Gaps = 6/156 (3%)

Query: 259 AEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRAN 317
             D +GV      G ++   L    R   +   +  +  P +  + LW++SG W  Y A 
Sbjct: 40  RTDTTGVHTLLPLGLRVRDQLDRITRDAFERNGFNSLALPTLQSRTLWEESGRWKVYTAE 99

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
              V     T        L P +     A     L+S+R+LPVRL    + +R+E S   
Sbjct: 100 GALVT----TRVGGADMCLAPTSEEMATATVRSHLRSHRDLPVRLTLNTTKFRDELSPR- 154

Query: 378 HGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
            GLMR R FT  DA+ F        E +++ N   +
Sbjct: 155 GGLMRGREFTMADAYTFDPDRAGMLESVRLLNRACT 190


>gi|325972599|ref|YP_004248790.1| ATPase AAA [Spirochaeta sp. Buddy]
 gi|324027837|gb|ADY14596.1| AAA ATPase [Spirochaeta sp. Buddy]
          Length = 561

 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 87/203 (42%), Gaps = 11/203 (5%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAES--------ISRSLAKKAVAVAINGKVCDLSDPV- 54
           ++ +T   G     P+ AT  DV           I        V   +N ++   S  + 
Sbjct: 3   NMNVTIQ-GQRITLPIGATVEDVLLEAKIEGTCPIPVYENDPIVGALVNHELHSCSRSLV 61

Query: 55  REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPF 114
            + ++E +         + RHS  +++  AV  ++P+ ++ IG  + DG+Y+ FD E   
Sbjct: 62  SDCTVEPVHLFGDMGKRIYRHSLCYLLCAAVSMLYPQRRLVIGHSLGDGYYFSFDDELML 121

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
           S  ++  IE+ M+ ++ ++    +  L ++ A   FE         +L S   +  V LY
Sbjct: 122 SGSDILAIEQAMRTLVEQNLSIEEITLPYQSALTYFEQNHFDQTAALL-STRNEPKVNLY 180

Query: 175 RQGEWFDLCRGPHVRSTGQVKKF 197
           R   + D+   P +  TG +K +
Sbjct: 181 RLSGYLDISYEPLLNKTGLMKVW 203


>gi|194751137|ref|XP_001957883.1| GF10636 [Drosophila ananassae]
 gi|190625165|gb|EDV40689.1| GF10636 [Drosophila ananassae]
          Length = 333

 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 54/252 (21%), Positives = 108/252 (42%), Gaps = 28/252 (11%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKV-CDLSDPVRE-GS 58
           +P D+ L             +T  + A+ +S    +++    I+G V  D+  P++E  +
Sbjct: 65  LPEDVTLVMN-------ANISTPYNCAQHLSEGHKRRSALALIDGSVPWDMHRPLQESCT 117

Query: 59  IEIITPEDPRSL---AVIRHSCAHIMAEAVQSIW-PEVQVAI----GPIIEDG-FYYDF- 108
           ++++  +             +C+ ++  A+   + PE  + +    GP I+ G F +D  
Sbjct: 118 LQLLHFQVSEPHVVNKAFWRTCSFMLGAALNRAFKPEANLQLHSFPGPNIKSGSFVHDIV 177

Query: 109 --DKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIP 166
              +    + +E+  +  +M ++   D    +  ++ + A+E+F+  K  YK E L SI 
Sbjct: 178 LQTRNWQPTKEEMRTVSAEMVKLALEDHEIERLDVTQDIAQEIFKDSK--YKSEQLPSIA 235

Query: 167 AKEN--VTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTA 224
            + +  VTLYR G+  D+ RGP V +T  +    K    A      +       RI G A
Sbjct: 236 QQTHGRVTLYRLGDHIDISRGPMVGATRFLG---KCTISAAHKVADEGETDGFYRIQGVA 292

Query: 225 WNTQQELTQYLY 236
             +  +L    +
Sbjct: 293 LPSGIQLNHVAF 304


>gi|297707682|ref|XP_002830624.1| PREDICTED: 39S ribosomal protein L39, mitochondrial-like isoform 1
           [Pongo abelii]
          Length = 338

 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 43/224 (19%), Positives = 89/224 (39%), Gaps = 24/224 (10%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPEDPRSLAV---IRHS 76
           +T    A  +S    +K++   ++G+  D+  P+ +   I+ +T +D     V      S
Sbjct: 86  STPYSCAMHLSEWYCRKSILALVDGQPWDMYKPLTKSCEIKFLTFKDRDPGEVNKAYWRS 145

Query: 77  CAHIMAEAVQSIWPEVQV------AIGPIIEDGFYYDFDKEQP-----FSSDELAQIEKK 125
           CA IM   ++  + +  +         P+I   F YD   +        + + L    K 
Sbjct: 146 CAMIMGCVIERAFKDEYMVNLVRAPEVPVISGAFCYDVVLDSKLDEWMPTKENLRSFTKD 205

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN---VTLYRQGEWFDL 182
              +I +D PF    +  + A E+   +   YK++ +E   ++     V L+R G++ D+
Sbjct: 206 AHALIYKDLPFETLEVEAKVALEI--FQHNKYKIDFIEEKASQNPERIVKLHRIGDFIDV 263

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWN 226
             GP +  T          +V+  +    +   ++ R  G +  
Sbjct: 264 SEGPLIPRTS----ICFQYEVSAVHNLQPTQPSLIRRFQGVSLP 303


>gi|320582734|gb|EFW96951.1| prolyl-tRNA synthetase, putative [Pichia angusta DL-1]
          Length = 536

 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 41/223 (18%), Positives = 73/223 (32%), Gaps = 20/223 (8%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYR 315
           ++++  +G+  W   G    + +   +R+       +E++   +  Q LW ++G W +  
Sbjct: 35  YVSQPNAGLTHWLPLGLSTIRNIEEIIRKHHDKAGCQEVSLSVMSHQSLWDKTGRWQN-- 92

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
                     D +  +  F L          +      SY++LPV   + G  YRNE   
Sbjct: 93  ----------DELFKVGDFCLAATAEEEMTQLVQRTADSYKKLPVIAYQIGRKYRNEKRP 142

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
              GL+R R F   DA+ F   +       +   +    Y  F    +    +      +
Sbjct: 143 R-GGLLRGREFVMKDAYSFDVDQSSALRSFE--KMNQVYYDIFKELNVPFVKANADSGAI 199

Query: 436 GSD--ALWDDAENIMKGVLDTIKNSSQDRINTGVLLG--EGAF 474
           G D    W       +  L              V     EG F
Sbjct: 200 GGDLSYEWHFLSESGEDTLLECDACGVVGNVERVRPHITEGHF 242



 Score = 42.1 bits (97), Expect = 0.27,   Method: Composition-based stats.
 Identities = 27/156 (17%), Positives = 52/156 (33%), Gaps = 20/156 (12%)

Query: 502 LPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE----NFKGNLPLWLSPIQAIV 557
                +A +V+S   + H  M    +   + R +  + E          P  ++PIQ  +
Sbjct: 375 YSEPLDAGFVDSEGRRQHYEMGCYGI--GVSRLVAAIAEVTRDADGLRWPASVAPIQVDI 432

Query: 558 TTITSSAVEY--AQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK--- 612
               S   +    ++  + L    L    D     +  K+        P+ +I G +   
Sbjct: 433 VVAGSYTGDLGAVEKFCSQLD--GLRYRVDATEGHLGEKLARSKRLGTPLQVIIGKQYPK 490

Query: 613 -EASERSIGIRR----FGSTTTQKVSLLDAIPILTK 643
            E   R  G+RR      S   Q+  +   +  + K
Sbjct: 491 IEIELR--GLRRDLGKLESEVQQQNGVDKLVVDVEK 524


>gi|315651887|ref|ZP_07904890.1| phosphoribulokinase [Eubacterium saburreum DSM 3986]
 gi|315485889|gb|EFU76268.1| phosphoribulokinase [Eubacterium saburreum DSM 3986]
          Length = 550

 Score =  102 bits (255), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 36/192 (18%), Positives = 76/192 (39%), Gaps = 10/192 (5%)

Query: 17  FPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRH 75
           +    +  D+         +KA+ V +NGK+ +L   ++ + ++E +T  D    ++   
Sbjct: 21  YEEGTSYFDIV----TEHKRKALLVKVNGKLQELHKTLKNDVNLEFVTLSDAIGRSIYER 76

Query: 76  SCAHIMAEAVQSIWPEVQVA-IGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDS 134
           S   I+ +A+  I+       +     +G +         +  ++ +I   M+E++  + 
Sbjct: 77  SAILILLKAIDDIYGSSISPRVEFSTGNGLFVRL---GSKTDYDVEKINNHMRELVDENI 133

Query: 135 PFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQV 194
              K  +  + A ++F       K E L        V +Y+  ++ D   G  V STG +
Sbjct: 134 RIEKTNVHTDLAIKMFHDAGFFEK-EKLFRFRRVSRVNIYKLEDYIDYYYGYMVYSTGYI 192

Query: 195 KKFFKLMKVAGA 206
            KF       G 
Sbjct: 193 DKFSLTRYKDGI 204


>gi|114683717|ref|XP_001158002.1| PREDICTED: 39S ribosomal protein L39, mitochondrial isoform 1 [Pan
           troglodytes]
 gi|114683719|ref|XP_001158054.1| PREDICTED: mitochondrial ribosomal protein L39 isoform 2 [Pan
           troglodytes]
          Length = 353

 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 46/272 (16%), Positives = 100/272 (36%), Gaps = 26/272 (9%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPEDPRSLAV---IRHS 76
           +T    A  +S    +K++   ++G+  D+  P+ +   I+ +T +D     V      S
Sbjct: 86  STPYSCAMHLSEWYCRKSILALVDGQPWDMYKPLTKSCEIKFLTFKDRDPGEVNKAYWRS 145

Query: 77  CAHIMAEAVQSIWPEVQV------AIGPIIEDGFYYDFDKEQP-----FSSDELAQIEKK 125
           CA +M   ++  + +  +         P+I   F YD   +        + + L    K 
Sbjct: 146 CAMMMGYVIERAFKDEYMVNLVRAPEVPVISGAFCYDVVLDSKLDEWMPTKENLRSFTKD 205

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN---VTLYRQGEWFDL 182
              +I +D PF    +  + A E+   +   YK++ +E   ++     V L+R G++ D+
Sbjct: 206 AHALIYKDLPFETLEVEAKVALEI--FQHSKYKIDFIEEKASQNPERIVKLHRIGDFIDV 263

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
             GP +  T          +V+  +    +   ++ R  G +         +  + +  E
Sbjct: 264 SEGPLIPRTS----ICFQYEVSAVHNLQPTQPSLIRRFQGVSLPV-HLRAHFTIWDKLLE 318

Query: 243 KRDHRKLAREMDLFHIA-EDGSGVIFWHRKGW 273
           +         + LF       +    +   G 
Sbjct: 319 RSRKMTPFPILFLFTTQSFFTTSPESYLLHGT 350


>gi|310793744|gb|EFQ29205.1| prolyl-tRNA synthetase [Glomerella graminicola M1.001]
          Length = 566

 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 44/232 (18%), Positives = 84/232 (36%), Gaps = 13/232 (5%)

Query: 247 RKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLW 305
            KL R   L    +  SG+      G ++   L   +   ++D     +    +  + LW
Sbjct: 3   DKLIRAGFLR---QSHSGIFHLLPLGRRVQDKLEHVIDYYMQDLGASRVALSTITSKDLW 59

Query: 306 QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEF 365
           Q+SG        +F+        +    + L P +      +    +KSY+ELP+RL + 
Sbjct: 60  QKSGRLSQLEPELFSFDD-----RRGAKYMLSPTHEEEITTLVAKTVKSYKELPLRLYQI 114

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
              +R+E     +GL+R R FT  D + F  + E       K+ +    ++       ++
Sbjct: 115 TRKFRDELRPR-YGLLRTREFTMKDLYTFDASAEAALETYNKVQSAYAGVFNALKLPVLV 173

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
            + S+       S   +     I +  + T        +N  V       +G
Sbjct: 174 ARASSGDMGGDLSHE-YHLPTTIGEDTVVTCSKCD-YTVNAEVAETRAVEHG 223



 Score = 53.2 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/180 (15%), Positives = 72/180 (40%), Gaps = 26/180 (14%)

Query: 489 RDWQCGTIQVDFNLPSRFNA-----FYVNSHSEK----CHPVMIHRAVFGS-IERFIGIM 538
           R  +   +   F+L +R++        V   + +        ++     G  + R IG +
Sbjct: 388 RVQEALEVGHTFHLGTRYSEPLGAVISVPEDNGRSGTSEKTTLMQMGCHGIGVSRLIGAV 447

Query: 539 IENFKG----NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIE-----TDFRNE 589
           +E+         P  ++P +A+V ++T    E A ++ + + ++    +      D R+ 
Sbjct: 448 VEHLADSKGLQWPRVIAPYEAVVISVTDLDKE-AVKVYDEITAYSKDFDAVDAVLDDRSV 506

Query: 590 TINYKIREHSIKKIPIIIICGD--KEASERSIGIRRFGSTTTQKVSLLDA---IPILTKE 644
           ++ +K+++  +   P++I+ G   K        ++       + V L +    +  L K+
Sbjct: 507 SLAWKLKDADLVGYPVLIVLGKVWK-KQTGICEVQCRRLGIKETVPLANLHRRVSELLKQ 565


>gi|307212509|gb|EFN88240.1| 39S ribosomal protein L39, mitochondrial [Harpegnathos saltator]
          Length = 310

 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 49/238 (20%), Positives = 98/238 (41%), Gaps = 22/238 (9%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRS---LAVIRHS 76
           +T  D A+ IS S+ K +    ++G++ D+  P      ++++T + PRS         +
Sbjct: 52  STPHDCAKHISESITKMSAIAFVDGQIWDMHKPFTGNCELQLVTMQTPRSGMINNAFWRT 111

Query: 77  CAHIMAEAVQSIWP-----EVQVAIGPIIEDG-FYYDFDKEQP---FSSDELAQIEKKMQ 127
           C+ I+    ++ +       +     P+I  G F YD   + P    +  EL  +     
Sbjct: 112 CSLILGAVAENAFKDNVNVHLHSFPYPVIRSGSFVYDVFIDLPSWQPTDSELRAMSALFV 171

Query: 128 EIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESI---PAKENVTLYRQGEWFDLCR 184
           + I R+    +  +    A+ +FE     +K + +  I      + VTLY+ G+  D+ +
Sbjct: 172 KFINRELLLERLEVPCSIAQHMFE--DNPFKYQQIPQIAKDNDDDKVTLYQLGDHIDISK 229

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           GP + ++G + +      V   +   +     L R  G A      L  + Y + E+ 
Sbjct: 230 GPMISNSGLIGRV----TVTAVHRLTNGPVDGLYRFQGVALPKGIMLNHFAYSILENR 283


>gi|312212761|emb|CBX92844.1| similar to prolyl-tRNA synthetase [Leptosphaeria maculans]
          Length = 610

 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 51/256 (19%), Positives = 86/256 (33%), Gaps = 32/256 (12%)

Query: 208 WRGDSNRPMLSRIYGTAWNTQQELTQYLYFL---------EESEKRDHRKLAREMDLFHI 258
           W         SR             +   F          +  +   H  L R   L   
Sbjct: 17  WTSPVPNSRYSRCITLIQPKTDSRNRLSKFWAPTGGISPQDGEQDDSHALLVRGGFLRQA 76

Query: 259 AEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRAN 317
               SGV      G ++   L + + + +      +++   +  + LW+QSG    Y AN
Sbjct: 77  H---SGVFHLLPLGLRVQSKLEALIDKHMSSISASKVSLSFITTEALWRQSGR---YSAN 130

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
              ++  D   +    F L P +     A+    + SY++LP+RL + G  YR+E     
Sbjct: 131 SELLRIND---RKESGFLLSPTHEEEITALVASTVHSYKDLPLRLYQIGRKYRDERRPR- 186

Query: 378 HGLMRVRGFTQDDAHVFCTK--------EQMFNECLKIHNLIISIY----KDFGFEKIMV 425
            GL+R + F   D + F T         EQ+      + + +   Y     D G     +
Sbjct: 187 QGLLRAKEFMMKDLYTFDTDANAALKTYEQVRQAYNNLFDELRIPYLVADADSGNMGGKL 246

Query: 426 KLSTRPEKRVGSDALW 441
                     G D +W
Sbjct: 247 SHEYHFISPKGEDNVW 262



 Score = 54.4 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 19/179 (10%), Positives = 53/179 (29%), Gaps = 34/179 (18%)

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG---SIERFIGIMIENFKGNLPLW 549
             T  +        +A +          + +     G    +    G++ +    N P  
Sbjct: 421 AHTFHLGTRYSDPLSAVFAPRDGTAKLAMHMGCHGIGLSRIVGAVAGLLCDERGLNWPRV 480

Query: 550 LSPIQAIVTTITSSAVEYAQEIANLLKSHHLS------IE-------------------- 583
           ++P + +V        E A  + + L            ++                    
Sbjct: 481 MAPFECVVLGGGGEEGEVAGRVYDGLVFGGRDGAAPGGVDNADATAPAAAAAVDADTVQP 540

Query: 584 ----TDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
                D R  +++ +K+R+  +   P++++ G        + ++       + VS+ + 
Sbjct: 541 IDTILDDRPGKSLGWKLRDADLIGYPVVVVVGRAWRERGEVEVQCRRLGVKRDVSVSEV 599


>gi|74001348|ref|XP_544833.2| PREDICTED: similar to mitochondrial ribosomal protein L39 isoform a
           [Canis familiaris]
          Length = 526

 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 48/261 (18%), Positives = 99/261 (37%), Gaps = 33/261 (12%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPEDPRSLAV---IRHS 76
           +T    A  +S    +K++   ++G+  D+  P+ +   IE +T +D     V      S
Sbjct: 274 STPYSCAMHLSEWYCRKSILALVDGQPWDMYKPLTKSCEIEFLTFKDRDPGEVNKAYWRS 333

Query: 77  CAHIMAEAVQSIWPEVQV------AIGPIIEDGFYYDFDKEQP-----FSSDELAQIEKK 125
           CA +M   ++  + +  V         P+I   F YD   ++       + + L  + K 
Sbjct: 334 CAMMMGCVIERAFKDEYVVSLIRAPEVPVICGAFCYDVVLDKRLDEWMPTKENLRSLTKD 393

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN---VTLYRQGEWFDL 182
            + +I +D PF    +  + A E+   +   YK++ +E   ++     V L+R G++ D+
Sbjct: 394 ARALIYKDLPFETLEVEAKVALEI--FQHNKYKMDFIEEKASQNPERIVKLHRFGDFIDV 451

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
             GP +  T          +V+  +    +   ++ R  G +             L    
Sbjct: 452 SEGPLIPRTS----ICFQYEVSAVHNLQANQLNLVRRFQGLSLPVH---------LRAHF 498

Query: 243 KRDHRKLAREMDLFHIAEDGS 263
              H+ L R   +    +   
Sbjct: 499 TIWHKLLERSRKMVTEDQTKP 519


>gi|281206251|gb|EFA80440.1| prolyl-tRNA synthetase [Polysphondylium pallidum PN500]
          Length = 880

 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 34/186 (18%), Positives = 71/186 (38%), Gaps = 8/186 (4%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
            I     G+        +  + LI  + +++ +   ++++ P++L + LW+++G W+S  
Sbjct: 371 MIRRASLGMYMTLPLAHRALENLIKIIDQEMSNIGGQKLSMPKLLSKELWEKTGRWESSG 430

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
             +  VK      +    + L P +     ++  +   +   LP++L + G  YR+E   
Sbjct: 431 DELIKVKD-----RKGEEYCLAPTHEEIFTSMLANERIATNNLPMKLYQIGDKYRDEIRP 485

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL-IISIYKDFGFEKIMVKLSTRPEKR 434
              GL+R R F   D + F        E   +       I+   G     V+  +     
Sbjct: 486 RF-GLLRGREFLMKDMYSFDKSVADAEETYNLVKTAYHRIFSRLGVNYACVEADSGNIGG 544

Query: 435 VGSDAL 440
             S   
Sbjct: 545 STSHEF 550



 Score = 40.9 bits (94), Expect = 0.66,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 44/108 (40%), Gaps = 13/108 (12%)

Query: 515 SEKCHPVMIHRAVFGS-IERFIGIMIENFKG----NLPLWLSPIQAIVTT----ITSSAV 565
           + +   V +    +G  + R +  ++E  K       P+ ++P + I+      + +  +
Sbjct: 735 NSEGVDVPMEMGCYGIGVSRLMAALVEAHKDLDGIVWPIQVAPYKLIILPYATELETENL 794

Query: 566 EYAQEIANLLKSH----HLSIETDFRNETINYKIREHSIKKIPIIIIC 609
             A E+ + L       +  I  D  + T   +I+E +I  +P I+  
Sbjct: 795 RKATELYDYLSKEPSLTNQIILEDRLDITFARRIKEATIIGVPYILFV 842


>gi|218961590|ref|YP_001741365.1| Uridine kinase [Candidatus Cloacamonas acidaminovorans]
 gi|167730247|emb|CAO81159.1| Uridine kinase [Candidatus Cloacamonas acidaminovorans]
          Length = 553

 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 55/229 (24%), Positives = 98/229 (42%), Gaps = 10/229 (4%)

Query: 38  AVAVAIN-GKVCDLSD-PVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQ-V 94
            +A+ IN  +  +    P RE  I+ IT   P    + + S   IMA+A+ ++      +
Sbjct: 37  ILAIKINHREYVNEDYIPDRETLIDFITYLHPEGYRIYQDSVIFIMAKALHTLMGTAHSL 96

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            +   I DG + +    Q F+  + ++++  MQ I+  D P  K  +  E+A ++F +  
Sbjct: 97  VVEHSIADGVFCEVFNTQNFTEADCSRLKTAMQNIVDSDLPIEKIMVKTEEALDIFSAMG 156

Query: 155 EAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNR 214
               ++ L     +ENV +YR G+++D    P V  TG+VK F  + +  G   R  S  
Sbjct: 157 RNDVLKNL-KYHYQENVEIYRCGKYYDCFVHPLVERTGKVKTFDIVYRSPGFILRFPSRD 215

Query: 215 PMLSRIYGTAWNTQ-----QELTQYLYFLEESEKRDHRKLAREMDLFHI 258
             +  I       +     QE  ++L  L      D  KL    ++   
Sbjct: 216 EKM-EIKPFELPYKLFAQHQEHDKWLDILRVHNIIDINKLIDNYEISEF 263


>gi|304436466|ref|ZP_07396440.1| phosphoribulokinase [Selenomonas sp. oral taxon 149 str. 67H29BP]
 gi|304370512|gb|EFM24163.1| phosphoribulokinase [Selenomonas sp. oral taxon 149 str. 67H29BP]
          Length = 540

 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 40/186 (21%), Positives = 82/186 (44%), Gaps = 3/186 (1%)

Query: 22  TGSDVAESISRSLAKKAVAVAINGKVCDLSDP-VREGSIEIITPEDPRSLAVIRHSCAHI 80
           T   +A+   ++ +   VA  ING+V D+      +  I  I         + + S   +
Sbjct: 4   TLMQLAQEEEQNYSSPIVAAKINGEVRDIQSEYDHDDEISFIELNTALGWRIYQRSILFL 63

Query: 81  MAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQIEKKMQEIIARDSPFLKQ 139
              AV ++  E +V     +  G Y +     Q  +   +  IE++M+ +IA + P LK 
Sbjct: 64  FIVAVSNMNKEAEVVAEFTVNKGLYCEVKIPGQSINPRLIQDIEQEMRGMIANNVPILKH 123

Query: 140 YLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFK 199
            +  ++A ELF+++    K  ++ S+P    +++Y    + D   G  +  T  + +F  
Sbjct: 124 GIPRQEAIELFQARGNRGKAALIASLPH-PMISIYTCCNYPDYLYGAMLPETKLLGQFAL 182

Query: 200 LMKVAG 205
            ++ +G
Sbjct: 183 DVEQSG 188


>gi|229825186|ref|ZP_04451255.1| hypothetical protein GCWU000182_00538 [Abiotrophia defectiva ATCC
           49176]
 gi|229790558|gb|EEP26672.1| hypothetical protein GCWU000182_00538 [Abiotrophia defectiva ATCC
           49176]
          Length = 556

 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 77/199 (38%), Gaps = 8/199 (4%)

Query: 13  SIKNFPVHATGSDVAESI-SRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSL 70
            +  +      S++A+++   +  K  +   +NGK+ +L   V  +  +          +
Sbjct: 14  KVLEYDSGIKLSEIAKNVYGENHGK--LLAKVNGKLKELWKKVSEDAKVSFYDITSTDGI 71

Query: 71  AVIRHSCAHIMAEAVQSIWPEVQVA---IGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQ 127
                    +  ++V  ++ + +V        + +G + +       + + + ++  +M 
Sbjct: 72  RTYERGVLFLFIKSVHDVFGKSEVTGVNCEYSLGNGIFCEIRGNAKINDEFVIKVRNRMD 131

Query: 128 EIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPH 187
           E++  +  F K  +S ++A E F     + K E L          +YR GE++D   G  
Sbjct: 132 ELVRENILFEKSLVSTKEAVEKFLDSDLSDK-EHLFRYRRGSTTNIYRLGEYYDYFYGYM 190

Query: 188 VRSTGQVKKFFKLMKVAGA 206
             STG +K F       G 
Sbjct: 191 PPSTGALKSFDIKAYDGGI 209


>gi|170592483|ref|XP_001900994.1| probable proline-trna synthetase - fission yeast [Brugia malayi]
 gi|158591061|gb|EDP29674.1| probable proline-trna synthetase - fission yeast, putative [Brugia
           malayi]
          Length = 396

 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 70/358 (19%), Positives = 137/358 (38%), Gaps = 39/358 (10%)

Query: 274 KIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           +I   LI  +  ++      +I+ P +  + +WQ++G W ++ + MF +       K  +
Sbjct: 18  RIIDKLIKVIETELNAIGAYKISMPILGAKEMWQKAGRWSAFESEMFHLSD-----KTNQ 72

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRE-LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
            + L+P +      +     +  +   P+ L + G  +R+E     HG +R R F  +D 
Sbjct: 73  IYCLQPTHEEMVTKLVAEQGELRQAVYPLMLYQMGPKFRDETV-VGHGFLRSREFLMNDL 131

Query: 392 HVFCTKEQMFNECLKIHNLIIS--IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMK 449
           + F   EQ  ++   + +       +   G    +V+        +G D   +      K
Sbjct: 132 YSFDLTEQNASDTYSLVSKTYQRIFHDRLGINFYIVRADAGN---IGGDMSHEYHLPC-K 187

Query: 450 GVLDTIKNSSQDRINTGVLL---GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF 506
              D+I   S+  +     L   GE      K    + + I       T Q+      +F
Sbjct: 188 TGRDSIAYCSKCNLGMNHDLLKRGEKPCCCSKEYISIVETI---EIAHTFQLGDLFTKKF 244

Query: 507 NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF-----KGNLPLWLSPIQAIVT--- 558
            A + N       P++++    G I R I  +I++         LP  L P +  V    
Sbjct: 245 GAKHDNQ------PLIMNCFGIG-IGRLIAAIIDSMSPSTKALRLPYALVPFKVAVILPN 297

Query: 559 TITSSAVEYAQEI---ANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDK 612
              S  +E+A+ I    + + S    I  D R + +I  ++   +   IP I + G++
Sbjct: 298 KTQSETMEFAENIIGHLSQISSVQNDIFVDDRLDNSIGRRLLTAANLGIPHIFVVGNR 355


>gi|302925353|ref|XP_003054078.1| hypothetical protein NECHADRAFT_89892 [Nectria haematococca mpVI
           77-13-4]
 gi|256735019|gb|EEU48365.1| hypothetical protein NECHADRAFT_89892 [Nectria haematococca mpVI
           77-13-4]
          Length = 548

 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 38/182 (20%), Positives = 71/182 (39%), Gaps = 13/182 (7%)

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHL 304
           H KL R   L       SG+      G ++   +   + + +       ++   +  + L
Sbjct: 4   HGKLIRGGFLRQAH---SGIFQLLPMGLRVQDKIEKLLDKHMHSVGASRLSLSTISSEEL 60

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++S   D     +F +    +         L P +      +    LKSY++LP+RL +
Sbjct: 61  WRRSDRLDRVAPELFRLADRKEVP-----LILSPTHEEEITTLVAGTLKSYKDLPIRLYQ 115

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
               YR+E     HGL+R R F   D + F   +      ++ + L+ + Y+ F  E  +
Sbjct: 116 ITRKYRDERRPR-HGLLRSREFLMKDLYTF---DLTTAAAIETYRLVSAAYRAFFSELKL 171

Query: 425 VK 426
             
Sbjct: 172 PY 173



 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/131 (17%), Positives = 46/131 (35%), Gaps = 9/131 (6%)

Query: 516 EKCHPVMIHRAVFGS-IERFIG----IMIENFKGNLPLWLSPIQAIVTT----ITSSAVE 566
           +    V +     G  + R  G    I+ +    N P  ++P +  V         S   
Sbjct: 407 KPGSRVPVQMGCHGVGVSRIFGAVAEILADERGLNWPRAIAPFEVAVIPTPGLDKESIEI 466

Query: 567 YAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS 626
           Y   +A       L +  D R ++  +K+ +  I   P+++I G      R   ++    
Sbjct: 467 YDNLVAGSSSQPGLDVVLDDRKQSFGWKMNDADIVGYPVVVILGKAFKQGRLCEVQCRQL 526

Query: 627 TTTQKVSLLDA 637
           +  + V L + 
Sbjct: 527 SVKENVKLEEL 537


>gi|292670888|ref|ZP_06604314.1| phosphoribulokinase [Selenomonas noxia ATCC 43541]
 gi|292647509|gb|EFF65481.1| phosphoribulokinase [Selenomonas noxia ATCC 43541]
          Length = 540

 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 40/170 (23%), Positives = 78/170 (45%), Gaps = 3/170 (1%)

Query: 38  AVAVAINGKVCDLSDPVRE-GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAI 96
            VA  ING+V D+     +   I+ I  +     ++ R S   ++  AV  I  E +V  
Sbjct: 20  IVAAKINGEVRDIQTVYDDTDEIQFIELDTSLGWSIYRRSVLFLLIIAVNKIEHEAEVIA 79

Query: 97  GPIIEDGFYYDFDK-EQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKE 155
              +  G Y +     +   ++ + ++ K+M+++IA + P +K  +  E+A +LF+  + 
Sbjct: 80  KFTVNKGLYCEIKTSGKDIDANFIDKVNKQMRQMIADNIPIIKYTIPREEAIKLFQKSQR 139

Query: 156 AYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAG 205
             KV +L S+     ++LY    + D   GP +  T  + +F    +  G
Sbjct: 140 YGKVRLLSSLS-TPIISLYICESYSDYLYGPMLPETKHLNRFELDYEPHG 188


>gi|109065669|ref|XP_001105710.1| PREDICTED: 39S ribosomal protein L39, mitochondrial-like isoform 3
           [Macaca mulatta]
          Length = 338

 Score =  102 bits (253), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 42/224 (18%), Positives = 89/224 (39%), Gaps = 24/224 (10%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPEDPRSLAV---IRHS 76
           +T    A  +S    +K++   ++G+  D+  P+ +   I+ +T +D     V      S
Sbjct: 86  STPYSCAMHLSEWYCRKSILALVDGQPWDMYKPLTKSCEIKFLTFKDRDPGEVNKAYWRS 145

Query: 77  CAHIMAEAVQSIWPEVQV------AIGPIIEDGFYYDFDKEQP-----FSSDELAQIEKK 125
           CA +M   ++  + +  +         P+I   F YD   +        + + L    K 
Sbjct: 146 CAMMMGCVIERAFKDEYMVNLVRAPEVPVISGAFCYDVVLDSKLDEWMPTKENLRSFTKD 205

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN---VTLYRQGEWFDL 182
              +I +D PF    +  + A E+   +   YK++ +E   ++     V L+R G++ D+
Sbjct: 206 AHALIYKDLPFETLEVEAKVALEI--FQHNKYKIDFIEEKASQNPERIVKLHRIGDFIDV 263

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWN 226
             GP +  T          +V+  +    +   ++ R  G +  
Sbjct: 264 SEGPLIPRTS----ICFQYEVSAVHNLQPTQPSLIRRFQGVSLP 303


>gi|123959750|ref|NP_001074199.1| 39S ribosomal protein L39, mitochondrial [Bos taurus]
 gi|115545416|gb|AAI22668.1| Mitochondrial ribosomal protein L39 [Bos taurus]
 gi|296491627|gb|DAA33660.1| mitochondrial ribosomal protein L39 [Bos taurus]
          Length = 335

 Score =  102 bits (253), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 49/261 (18%), Positives = 98/261 (37%), Gaps = 33/261 (12%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPEDPRSLAV---IRHS 76
           +T    A  +S    +K++   ++G+  D+  P+ +   I+ +T +D     V      S
Sbjct: 83  STPYSCAMHLSEWYCRKSILALVDGQPWDMYKPLTKSCEIKFLTFKDDDPGEVNKAYWRS 142

Query: 77  CAHIMAEAVQSIWPEVQVAI------GPIIEDGFYYDFDKEQP-----FSSDELAQIEKK 125
           CA IM   ++  + E  V         P+I   F YD   ++       + + L    K 
Sbjct: 143 CAMIMGCVIERAFKEEYVVHLVRAPEVPVIAGAFCYDVVLDKRLDEWMPTKENLRSFTKD 202

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN---VTLYRQGEWFDL 182
            + +I +D PF    +  + A E+   +   YKV+ +E   ++     V L+R G++ D+
Sbjct: 203 ARALIYKDLPFETLEVEAKVALEI--FQHNKYKVDFIEEKASQNPERIVKLHRFGDFIDV 260

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
             GP +  T          +V+  +    +   ++ R  G +             L    
Sbjct: 261 SEGPLIPRTS----ICFQYEVSVVHNLQATQSSLVRRFQGLSLPVH---------LRAHF 307

Query: 243 KRDHRKLAREMDLFHIAEDGS 263
              ++ L R   +    +   
Sbjct: 308 TIWNKLLERSRKMVTEDQTKP 328


>gi|260784157|ref|XP_002587135.1| hypothetical protein BRAFLDRAFT_102224 [Branchiostoma floridae]
 gi|229272273|gb|EEN43146.1| hypothetical protein BRAFLDRAFT_102224 [Branchiostoma floridae]
          Length = 326

 Score =  102 bits (253), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 45/223 (20%), Positives = 89/223 (39%), Gaps = 17/223 (7%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPED---PRSLAVIRHS 76
           +T    A  IS +  K +V   +NG+  D+  P+  +  +  +   D     +      S
Sbjct: 76  STPYHCAMHISETYTKYSVLAMVNGEPWDMWRPLTEDCELSFVRFRDKHPEEANKSYWRS 135

Query: 77  CAHIMAEAVQSIWPE------VQVAIGPIIEDGFYYDFD---KEQPFSSDELAQIEKKMQ 127
           CA I+   +++ + +       +    PII+  F YD D   K+   +++ L  +     
Sbjct: 136 CALILGAVMETAFKDTIYVQLARALELPIIKGMFVYDVDLGLKDWTPTNENLRSLSLSAI 195

Query: 128 EIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPH 187
            + ++D PF +  +    A  L   +   YK   +E       VTLYR G++ D+  GP 
Sbjct: 196 TMKSKDLPFERLEVDPSLALRL--FQHNEYKQREVEERVRGGRVTLYRMGKFIDIHDGPM 253

Query: 188 VRSTGQVKKFFK--LMKVAGAYWRGDSNRPMLSRIYGTAWNTQ 228
           +  +  V  F    + ++ G  +R  +          ++   +
Sbjct: 254 MSKSSLVSMFTVAGIHELPGGLYRVQAISLPHDFYLHSSVWNK 296


>gi|78778894|ref|YP_397006.1| prolyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312]
 gi|114152228|sp|Q31C25|SYP_PROM9 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|78712393|gb|ABB49570.1| prolyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312]
          Length = 600

 Score =  102 bits (253), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 48/231 (20%), Positives = 93/231 (40%), Gaps = 8/231 (3%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTP 297
            E+E   H+ L +   +  +    SG+  +     K+ + +   +  ++      ++  P
Sbjct: 17  SEAEIISHQLLLKAGYIRRVY---SGIYAYMPIMLKVIEKISKIIEIELNSIGCTKLLLP 73

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           Q+   +LW++S  W+ Y A    +    D  +  + F L P +     ++ +  + SY++
Sbjct: 74  QLHPANLWKKSERWEGYTAGEGIMFNLKD--RQGKEFGLAPTHEEVITSIASEIINSYKQ 131

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYK 416
           LP    +  + +R+E      GLMR R F   D + F + E+       K+ N   +I+K
Sbjct: 132 LPQCFYQIQTKFRDEIRPRF-GLMRSREFIMKDGYSFHSSEKDLASFYEKVGNAYENIFK 190

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGV 467
             G E + V+  +       S      A+     +L T   S    I   V
Sbjct: 191 SCGLETVGVEADSGAIGGASSKEFMVTADAGEDSILFTQSGSYAANIEKAV 241



 Score = 71.7 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 68/193 (35%), Gaps = 15/193 (7%)

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIG--RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHP 520
           +  +     A  G K +    + +   +  + G I Q+      + NA + +      + 
Sbjct: 404 DYLIEDIRNAKKGDKIKINDNEELKEKKGIEIGHIFQLGQKYSEKLNAKFSDKDGHLKN- 462

Query: 521 VMIHRAVFGS-IERFIGIMIENFKGN----LPLWLSPIQAIVTTITSS---AVEYAQEIA 572
             +    +G  + R     IE          P+ +SP + I+           +  ++I 
Sbjct: 463 --LWMGCYGIGVTRIAQAAIEQNHDQKGICWPIQISPFEVIIIPTNLKDQIQRDLTEQIY 520

Query: 573 NLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
           N    + + +  D R +    K ++  +  IP  II G +++    + +    + T  K+
Sbjct: 521 NNFLVNKIDVLLDDREDRAGVKFKDAELIGIPFQIIIG-RDSINNEVELICRTNNTKFKI 579

Query: 633 SLLDAIPILTKES 645
           S    +     ES
Sbjct: 580 SAHKLLETFISES 592


>gi|288574491|ref|ZP_06392848.1| phosphoribulokinase/uridine kinase [Dethiosulfovibrio peptidovorans
           DSM 11002]
 gi|288570232|gb|EFC91789.1| phosphoribulokinase/uridine kinase [Dethiosulfovibrio peptidovorans
           DSM 11002]
          Length = 546

 Score =  102 bits (253), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 42/202 (20%), Positives = 84/202 (41%), Gaps = 8/202 (3%)

Query: 1   MPSDIKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGS 58
           M   I++    G S  +  +  +G  V  S      +  VA  +N  +  L   V  +  
Sbjct: 1   MSFVIRIK---GFSDIHCEMPLSGQGVLASTGLYKNRNIVAWRVNNYLRPLEWVVDGDAD 57

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           +E +         V R S   ++  A +    +  + I   I +G +++ + E   + ++
Sbjct: 58  VEFVDTYSFEGTMVYRSSLGFLLVLASRKALGK-PIFIRHSISEGHFWELEDED-ITEED 115

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           LA I + M+++I  D P  ++ +S +KA  +FE +    K  +   +     + +YR  +
Sbjct: 116 LASIAETMKDLIGMDIPITREVVSLDKACRIFERQGNPEKGRLFSRVYMDP-IEVYRCLD 174

Query: 179 WFDLCRGPHVRSTGQVKKFFKL 200
            +     P V STG +K +   
Sbjct: 175 MYGFFYCPLVPSTGYLKNWDLK 196


>gi|332229343|ref|XP_003263849.1| PREDICTED: 39S ribosomal protein L39, mitochondrial isoform 1
           [Nomascus leucogenys]
          Length = 338

 Score =  101 bits (252), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 42/224 (18%), Positives = 90/224 (40%), Gaps = 24/224 (10%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPEDPRSLAV---IRHS 76
           +T    A  +S    +K++   ++G+  D+  P+ +   I+ +T +D     V      S
Sbjct: 86  STPYSCAMHLSEWYCRKSILALVDGQPWDMYKPLTKSCEIKFLTFKDRDPGEVNKAYWRS 145

Query: 77  CAHIMAEAVQSIWPEVQV------AIGPIIEDGFYYDFDKEQP-----FSSDELAQIEKK 125
           CA +M   ++  + +  V         P+I   F YD   +        + + L    K 
Sbjct: 146 CAMMMGCVIERAFKDEYVVNLVRAPEVPVISGAFCYDVVLDSKLDEWMPTKENLRSFTKD 205

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN---VTLYRQGEWFDL 182
              +I +D PF    +  + A E+   +   YK++ +E   ++ +   + L+R G++ D+
Sbjct: 206 AHALIYKDLPFETLEVEAKVALEI--FQHNKYKIDFIEEKASQNSERIIKLHRIGDFIDV 263

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWN 226
             GP +  T          +V+  +    +   ++ R  G +  
Sbjct: 264 SEGPLIPRTS----ICFQYEVSAVHNLQPTQPSLIRRFQGVSLP 303


>gi|46143184|ref|ZP_00135708.2| COG0441: Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
          Length = 95

 Score =  101 bits (252), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 36/89 (40%), Positives = 60/89 (67%), Gaps = 1/89 (1%)

Query: 46  KVCDLSDPV-REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGF 104
           +  D  D +  + S+EIIT +D   L +IRHSCAH++  A++ ++P V++AIGP I++GF
Sbjct: 5   ERRDACDIISEDSSLEIITAKDEDGLEIIRHSCAHLLGHAIKQLFPNVKMAIGPTIDNGF 64

Query: 105 YYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           YYD D ++  + ++L  IEK+M E+   +
Sbjct: 65  YYDVDLDRSLTQEDLDAIEKRMLELARAN 93


>gi|195454743|ref|XP_002074382.1| GK10572 [Drosophila willistoni]
 gi|194170467|gb|EDW85368.1| GK10572 [Drosophila willistoni]
          Length = 331

 Score =  101 bits (252), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 56/240 (23%), Positives = 102/240 (42%), Gaps = 21/240 (8%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKV-CDLSDPVRE-GSIEIITPEDPRSL---AVIRH 75
           +T  + A+ +S    K++    I+G +  D+  P++E  +++++                
Sbjct: 76  STPYNCAQHLSEGHCKRSALALIDGTIPWDMHRPLQESCTLQLLPFNVSEPHVVNKAFWR 135

Query: 76  SCAHIMAEAVQSIWP-----EVQVAIGPIIEDG-FYYDF---DKEQPFSSDELAQIEKKM 126
           +C+ ++  A+   +      ++    GP I+ G F +D     +    S  EL  I  +M
Sbjct: 136 TCSFLLGAALHKSFKSEANLQLHSFPGPNIKSGSFVHDIVLSSQRWQPSKSELRAISAEM 195

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK--ENVTLYRQGEWFDLCR 184
            ++ A+D    +  +  E A E+F+  +  YK E L SI  +    VTLYR GE  D+ R
Sbjct: 196 VKMSAQDILIERLDVQQELAYEMFKDSR--YKSEQLPSIGKQNQGRVTLYRVGEHIDISR 253

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR 244
           GP V ST  + K    +         + +     RI G A  +   L  + + L E   +
Sbjct: 254 GPMVASTRFLGKCTIGVSHK---LANEGSSGAFYRIQGIALPSGYMLNHFAFGLLEQRAQ 310


>gi|322786154|gb|EFZ12760.1| hypothetical protein SINV_13030 [Solenopsis invicta]
          Length = 347

 Score =  101 bits (252), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 56/319 (17%), Positives = 108/319 (33%), Gaps = 20/319 (6%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRA 316
           I     G+      G +I   LI+ + +++     E+I  P +    LW+++  +D  + 
Sbjct: 25  IKPVSIGMYALLPLGMRILNKLINLVDKEMTSIGAEKILLPALTSVALWKKTDRYDCNKT 84

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPSG 375
            +F +       +  + + L P +      + +   + S + LP++L +  S +R+E   
Sbjct: 85  ELFTLMD-----RHKKEYILSPTHEEAICDLISSAGQFSAKSLPLKLYQISSKWRDEMKP 139

Query: 376 SLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
            L GL+R R F   D + F T  +        +     +I++  G E             
Sbjct: 140 RL-GLLRSREFIMKDLYTFDTSLDNARYTYNLVCESYNNIFRKIGVEYTKSIGDMGTIGG 198

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           + S      +      +L          IN  +          K E     A        
Sbjct: 199 LMSHEYHYISNIGEDTILRC--RLCHFSINQSISKTTSCPEC-KNELHQHTAA---EVGH 252

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG---SIERFIGIMIENFKGNLPLWLS 551
           T  +D        A YV  +  K  P+++     G    I   + I+    +   P+ L+
Sbjct: 253 TFLLDTKYSQPLKALYVEEN--KSKPMIMGSFGLGLSRIITLAVEILSTKNELRWPVKLA 310

Query: 552 PIQAIVTTITSSAVEYAQE 570
           P    V        +  +E
Sbjct: 311 PYTICVIPPKVDVWQQMRE 329


>gi|294933722|ref|XP_002780830.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
 gi|239890921|gb|EER12625.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
          Length = 341

 Score =  101 bits (251), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 73/220 (33%), Gaps = 30/220 (13%)

Query: 453 DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYV 511
           D +       + + +    G       E       GR  Q  T   +  +    F   + 
Sbjct: 15  DLLAVPVVQGVKSEMEKFAGGEATTTCE-AFVACNGRAVQGATSHFLGTHFAKMFGIEFE 73

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTTITSS---- 563
           + + EK       +  +G   R IG+MI     +  L L P    +Q ++  I       
Sbjct: 74  DRNGEKK---FAEQTSWGFTTRSIGVMIMEHGDDKGLVLPPRVAEVQVVIVPIPPKGAGA 130

Query: 564 ----------AVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDK 612
                       E  + +   L ++ + +  D R++ T  YK     +K +P+ I  G K
Sbjct: 131 QWSTAELKTMIGEKCKSLYEDLNANGVRVVLDDRDDKTPGYKFNHWELKGVPLRIEVGAK 190

Query: 613 EASERSIGIRRFGST------TTQKVSLLDAIPILTKESL 646
           +  +  +   R  +           V + +A+  +  E L
Sbjct: 191 DLEKGVVTFVRRNTGKKSQEAEHSSVKVKEALESIQSELL 230


>gi|294101431|ref|YP_003553289.1| phosphoribulokinase/uridine kinase [Aminobacterium colombiense DSM
           12261]
 gi|293616411|gb|ADE56565.1| phosphoribulokinase/uridine kinase [Aminobacterium colombiense DSM
           12261]
          Length = 547

 Score =  101 bits (251), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 46/211 (21%), Positives = 85/211 (40%), Gaps = 16/211 (7%)

Query: 1   MPSDIKLTFPDGSIKNF-----PVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV- 54
           M   I +       +N+         +G DV            VA  +N  +  L   V 
Sbjct: 1   MSFQINI-------RNYHTCECSSAMSGKDVLSKADIDGGSHIVAWRVNSYLRPLGWVVD 53

Query: 55  REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPF 114
            +  +E +       + V R S +  +  A Q    +  V I   I DG+Y++   ++  
Sbjct: 54  EDSEVEFVDTSSFEGMEVYRRSLSFSLVLAAQRALGK-NVTIKHSISDGYYWEL-PDRDL 111

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
           + +E+ +I K +++++ RD P  ++ +  +KAR +FE +        L    A++ V LY
Sbjct: 112 TEEEVLRINKALRDLVNRDVPITREVVPLDKARRIFERQGNPESAR-LFMWAAEDPVELY 170

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAG 205
           R  + +     P   STG ++ F       G
Sbjct: 171 RCEDNYGFYYAPLAPSTGYLRVFELKYFPPG 201


>gi|33337737|gb|AAQ13505.1|AF109357_1 MSTP003 [Homo sapiens]
 gi|38014060|gb|AAH04896.2| MRPL39 protein [Homo sapiens]
          Length = 333

 Score =  101 bits (251), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 43/224 (19%), Positives = 89/224 (39%), Gaps = 24/224 (10%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPEDPRSLAV---IRHS 76
           +T    A  +S    +K++   ++G+  D+  P+ +   I+ +T +D     V      S
Sbjct: 81  STPYSCAMHLSEWYCRKSILALVDGQPWDMYKPLTKSCEIKFLTFKDCDPGEVNKAYWRS 140

Query: 77  CAHIMAEAVQSIWPEVQV------AIGPIIEDGFYYDFDKEQP-----FSSDELAQIEKK 125
           CA +M   ++  + +  +         P+I   F YD   +        + + L    K 
Sbjct: 141 CAMMMGCVIERAFKDEYMVNLVRAPEVPVISGAFCYDVVLDSKLDEWMPTKENLRSFTKD 200

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN---VTLYRQGEWFDL 182
              +I +D PF    +  + A E+   +   YKV+ +E   ++     V L+R G++ D+
Sbjct: 201 AHALIYKDLPFETLEVEAKVALEI--FQHSKYKVDFIEEKASQNPERIVKLHRIGDFIDV 258

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWN 226
             GP +  T          +V+  +    +   ++ R  G +  
Sbjct: 259 SEGPLIPRTS----ICFQYEVSAVHNLQPTQPSLIRRFQGVSLP 298


>gi|296452977|sp|Q9NYK5|RM39_HUMAN RecName: Full=39S ribosomal protein L39, mitochondrial;
           Short=L39mt; Short=MRP-L39; AltName: Full=39S ribosomal
           protein L5, mitochondrial; Short=L5mt; Short=MRP-L5
          Length = 338

 Score =  101 bits (251), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 43/224 (19%), Positives = 89/224 (39%), Gaps = 24/224 (10%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPEDPRSLAV---IRHS 76
           +T    A  +S    +K++   ++G+  D+  P+ +   I+ +T +D     V      S
Sbjct: 86  STPYSCAMHLSEWYCRKSILALVDGQPWDMYKPLTKSCEIKFLTFKDCDPGEVNKAYWRS 145

Query: 77  CAHIMAEAVQSIWPEVQV------AIGPIIEDGFYYDFDKEQP-----FSSDELAQIEKK 125
           CA +M   ++  + +  +         P+I   F YD   +        + + L    K 
Sbjct: 146 CAMMMGCVIERAFKDEYMVNLVRAPEVPVISGAFCYDVVLDSKLDEWMPTKENLRSFTKD 205

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN---VTLYRQGEWFDL 182
              +I +D PF    +  + A E+   +   YKV+ +E   ++     V L+R G++ D+
Sbjct: 206 AHALIYKDLPFETLEVEAKVALEI--FQHSKYKVDFIEEKASQNPERIVKLHRIGDFIDV 263

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWN 226
             GP +  T          +V+  +    +   ++ R  G +  
Sbjct: 264 SEGPLIPRTS----ICFQYEVSAVHNLQPTQPSLIRRFQGVSLP 303


>gi|308805150|ref|XP_003079887.1| multifunctional aminoacyl-tRNA ligase-like protein (ISS)
           [Ostreococcus tauri]
 gi|116058344|emb|CAL53533.1| multifunctional aminoacyl-tRNA ligase-like protein (ISS)
           [Ostreococcus tauri]
          Length = 589

 Score =  101 bits (251), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 61/351 (17%), Positives = 119/351 (33%), Gaps = 67/351 (19%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ-HLWQQSGHWDSYRAN 317
            D SG        +  ++ L  +  ++IK  D E    P  +    L ++  H + +   
Sbjct: 278 YDISGCYILKPWAYAQWEVLKEFFDKEIKALDVENCYFPMFVSASRLEKEKDHIEDFAPE 337

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           +  V  + +T  ++   A++P +       +   ++S+R+LP+RL ++ +V R E     
Sbjct: 338 VAWVTRSGETDLEV-PIAVRPTSETVMYPHYAQWIRSHRDLPLRLNQWCNVVRWEFKHPT 396

Query: 378 HGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
              +R R F   + H  + TKE+   E  +I +L   +Y+++    ++    +  EK  G
Sbjct: 397 -PFIRSREFLWQEGHTAYATKEECDVEVFQILDLYRRVYEEYLAVPVVPGKKSEKEKFAG 455

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
                                                 Y    E  +    GR  Q  T 
Sbjct: 456 G------------------------------------LYTTTVEAYVP-GSGRGVQGATS 478

Query: 497 QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG----IMIENFKGNLPLWLSP 552
                  S+   F +     K    +  +  +G   R +G    +  ++    LP  ++P
Sbjct: 479 HCLGQNFSK--MFNIEFEDTKGGKSLAWQNSWGFTTRTLGVCYMVHGDDDGLVLPPKVAP 536

Query: 553 IQAIV-------------------TTITSSAVEYAQEIANLLKSHHLSIET 584
           IQAI                       T   +  A  +   LK+  +  + 
Sbjct: 537 IQAIHWRLYQYLVETFGSWLSYNGLVSTFMFLNIADGMTKALKAAGVRSKL 587


>gi|332871259|ref|XP_514842.3| PREDICTED: 39S ribosomal protein L39, mitochondrial isoform 3 [Pan
           troglodytes]
          Length = 338

 Score =  101 bits (251), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 42/224 (18%), Positives = 89/224 (39%), Gaps = 24/224 (10%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPEDPRSLAV---IRHS 76
           +T    A  +S    +K++   ++G+  D+  P+ +   I+ +T +D     V      S
Sbjct: 86  STPYSCAMHLSEWYCRKSILALVDGQPWDMYKPLTKSCEIKFLTFKDRDPGEVNKAYWRS 145

Query: 77  CAHIMAEAVQSIWPEVQV------AIGPIIEDGFYYDFDKEQP-----FSSDELAQIEKK 125
           CA +M   ++  + +  +         P+I   F YD   +        + + L    K 
Sbjct: 146 CAMMMGYVIERAFKDEYMVNLVRAPEVPVISGAFCYDVVLDSKLDEWMPTKENLRSFTKD 205

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN---VTLYRQGEWFDL 182
              +I +D PF    +  + A E+   +   YK++ +E   ++     V L+R G++ D+
Sbjct: 206 AHALIYKDLPFETLEVEAKVALEI--FQHSKYKIDFIEEKASQNPERIVKLHRIGDFIDV 263

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWN 226
             GP +  T          +V+  +    +   ++ R  G +  
Sbjct: 264 SEGPLIPRTS----ICFQYEVSAVHNLQPTQPSLIRRFQGVSLP 303


>gi|194226155|ref|XP_001496737.2| PREDICTED: similar to mitochondrial ribosomal protein L39 [Equus
           caballus]
          Length = 433

 Score =  101 bits (251), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 43/224 (19%), Positives = 91/224 (40%), Gaps = 24/224 (10%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPEDPRSLAV---IRHS 76
           +T    A  +S    +K++   ++G+  D+  P+ +   I+ +T +D     V      S
Sbjct: 181 STPYSCAMHLSEWYCRKSILALVDGQPWDMYKPLTKSCEIQFLTFKDRDPGEVNKAYWRS 240

Query: 77  CAHIMAEAVQSIWPEVQV------AIGPIIEDGFYYDFDKEQ-----PFSSDELAQIEKK 125
           CA +M   ++  + +  V         P+I   F YD   ++       + + L    K 
Sbjct: 241 CAMMMGCVIERAFKDEYVVSLVRAPEVPVIAGAFCYDVVLDKRLDEWVPTKENLRSFTKD 300

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN---VTLYRQGEWFDL 182
            + +I +D PF    +  + A E+   +   YK++ +E   ++     V L+R G++ D+
Sbjct: 301 ARALIYKDLPFEPLEVDAKVALEI--FQHNKYKIDFIEEKASQNPERIVKLHRFGDFVDV 358

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWN 226
             GP +  T          +V+  +    +   ++ R  G +  
Sbjct: 359 SEGPLIPRTS----ICFQYEVSAVHNLQATQSSLVRRFQGLSLP 398


>gi|27886582|ref|NP_059142.2| 39S ribosomal protein L39, mitochondrial isoform a [Homo sapiens]
 gi|78394909|gb|AAI07720.1| Mitochondrial ribosomal protein L39 [Homo sapiens]
 gi|119630384|gb|EAX09979.1| mitochondrial ribosomal protein L39, isoform CRA_a [Homo sapiens]
          Length = 338

 Score =  101 bits (251), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 43/224 (19%), Positives = 89/224 (39%), Gaps = 24/224 (10%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPEDPRSLAV---IRHS 76
           +T    A  +S    +K++   ++G+  D+  P+ +   I+ +T +D     V      S
Sbjct: 86  STPYSCAMHLSEWYCRKSILALVDGQPWDMYKPLTKSCEIKFLTFKDCDPGEVNKAYWRS 145

Query: 77  CAHIMAEAVQSIWPEVQV------AIGPIIEDGFYYDFDKEQP-----FSSDELAQIEKK 125
           CA +M   ++  + +  +         P+I   F YD   +        + + L    K 
Sbjct: 146 CAMMMGCVIERAFKDEYMVNLVRAPEVPVISGAFCYDVVLDSKLDEWMPTKENLRSFTKD 205

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN---VTLYRQGEWFDL 182
              +I +D PF    +  + A E+   +   YKV+ +E   ++     V L+R G++ D+
Sbjct: 206 AHALIYKDLPFETLEVEAKVALEI--FQHSKYKVDFIEEKASQNPERIVKLHRIGDFIDV 263

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWN 226
             GP +  T          +V+  +    +   ++ R  G +  
Sbjct: 264 SEGPLIPRTS----ICFQYEVSAVHNLQPTQPSLIRRFQGVSLP 303


>gi|296187093|ref|ZP_06855491.1| TGS domain protein [Clostridium carboxidivorans P7]
 gi|296048287|gb|EFG87723.1| TGS domain protein [Clostridium carboxidivorans P7]
          Length = 90

 Score =  101 bits (250), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 29/85 (34%), Positives = 49/85 (57%), Gaps = 1/85 (1%)

Query: 4  DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEII 62
           +K+T  DGS+         +DVA  +S SLAKKA+   I+G+  +L   V  +  +EI+
Sbjct: 1  MVKITLKDGSLIEVEKGTKVADVAAKLSTSLAKKALGAKIDGERAELMAEVNNDCKLEIL 60

Query: 63 TPEDPRSLAVIRHSCAHIMAEAVQS 87
          T +D     ++RH+ +HI+A+A + 
Sbjct: 61 TFDDEDGKWILRHTGSHILAQASKK 85


>gi|206900142|ref|YP_002251544.1| uridine kinase [Dictyoglomus thermophilum H-6-12]
 gi|206739245|gb|ACI18303.1| uridine kinase [Dictyoglomus thermophilum H-6-12]
          Length = 555

 Score =  101 bits (250), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 53/212 (25%), Positives = 95/212 (44%), Gaps = 11/212 (5%)

Query: 4   DIKLTFPDGSIK-NFPVHATGSDVAESISRSLAK------KAVAVAINGKVCDLSDPVRE 56
            I + F  G+I+          +V  S    L K        VAV +NG +  L+  V +
Sbjct: 1   MINIEF-RGAIRTEIEEPKPVIEVLNSYPEILEKLLNPGEIPVAVKVNGDIETLNYMVED 59

Query: 57  G-SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFS 115
              ++II         ++  S   ++  AV  I PE +V +        Y  F    P  
Sbjct: 60  DVRLDIIGSRSNIGRRILERSYIFLLNFAVSLIMPEQKVLVEHSYHRSLYGRFKNYVP-K 118

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            +++ +I +KM+E++ ++ P  K+ ++ E+A ++F+ K E  KV +++ IP KE + LY 
Sbjct: 119 GEDIDRIREKMRELVEKNLPIQKKLVTKEEALKIFKEKNEEDKVRLMKYIPFKE-IPLYY 177

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAY 207
             + ++    P V ST  +K F   +   G  
Sbjct: 178 IDDHYEYSFLPLVPSTSFLKTFDLKLYQPGFI 209


>gi|331002268|ref|ZP_08325787.1| hypothetical protein HMPREF0491_00649 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330411362|gb|EGG90778.1| hypothetical protein HMPREF0491_00649 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 544

 Score =  101 bits (250), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 84/197 (42%), Gaps = 12/197 (6%)

Query: 11  DGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRS 69
           +  I  +       D+         K+A+ V +NGK+ +L   ++ + ++E IT  D   
Sbjct: 11  NNEIFEYADKTKYFDIVM----EHKKRALLVKVNGKLQELHKTLKQDVTLEFITLSDAIG 66

Query: 70  LAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQE 128
                 S   I+ ++++ I+ + ++  +     +G +   + +      ++ +I+K+M+E
Sbjct: 67  RMTYERSAVLILLKSIKDIYGDSIRPVVEFSTGNGLFIRMNADF-----DIERIDKRMRE 121

Query: 129 IIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           ++  +    K  +  + A ++F       K E L S      V +Y+  E+ D   G  V
Sbjct: 122 LVDENIRIEKMNVHTDAAIQMFHDAGMYEK-EKLFSFRRVSRVNIYKLEEFIDYNYGYMV 180

Query: 189 RSTGQVKKFFKLMKVAG 205
            STG + KF       G
Sbjct: 181 YSTGYIDKFRLTRYKDG 197


>gi|257413581|ref|ZP_04743496.2| proline--tRNA ligase [Roseburia intestinalis L1-82]
 gi|257203071|gb|EEV01356.1| proline--tRNA ligase [Roseburia intestinalis L1-82]
          Length = 241

 Score =  101 bits (250), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 37/193 (19%), Positives = 78/193 (40%), Gaps = 11/193 (5%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-D 290
            ++     +     H  + +   + ++A        +     +I   +   +R ++   D
Sbjct: 17  ERFRERPADCVIDSHALMVKGGYMKYMA--NGIYSSYLPL-KRITCKIEQILREEMDKLD 73

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH 350
            +E++ P V+   LW++SG ++S    +      ++         L   +    V +   
Sbjct: 74  GQEVSFPVVMPASLWEESGRYESVGEELLRFTDRNNA-----KMVLGMTHEEAAVHLVRE 128

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHN 409
             KSY + P  + +  + +R+E      GL+RVR FT  DA+ F T ++  N+   K H 
Sbjct: 129 YAKSYNKYPFMIYQIQTKFRDEARPR-AGLIRVREFTMKDAYSFHTSQEDLNQYYEKCHK 187

Query: 410 LIISIYKDFGFEK 422
               I++  G  +
Sbjct: 188 AYERIFERAGIPE 200


>gi|328479646|gb|EGF48826.1| threonyl-tRNA synthetase [Lactobacillus rhamnosus MTCC 5462]
          Length = 101

 Score =  100 bits (249), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 25/80 (31%), Positives = 46/80 (57%)

Query: 565 VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRF 624
           ++Y   I   +++  L ++ D RNE + YKIRE   KK+P  ++ GDKE ++ ++ +RR+
Sbjct: 1   LDYVNRIKRQMQAAGLRVKVDDRNEKMGYKIREAQTKKVPYTVVVGDKELNDAAVSVRRY 60

Query: 625 GSTTTQKVSLLDAIPILTKE 644
           G   T++ +    I  +  E
Sbjct: 61  GDEHTEEEAGNMFIDAMVAE 80


>gi|296231948|ref|XP_002761372.1| PREDICTED: 39S ribosomal protein L39, mitochondrial [Callithrix
           jacchus]
          Length = 338

 Score =  100 bits (248), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 41/224 (18%), Positives = 89/224 (39%), Gaps = 24/224 (10%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPEDPRSLAV---IRHS 76
           +T  + A  +S    +K++   ++G+  D+  P+ +   I+ +T +D     V      S
Sbjct: 86  STPYNCAMHLSEWYCRKSILALVDGQPWDMYKPLTKSCEIQFLTFKDRDPGEVNKAYWRS 145

Query: 77  CAHIMAEAVQSIWPEVQV------AIGPIIEDGFYYDFDKEQP-----FSSDELAQIEKK 125
           CA +M   ++  + +  +         P+I   F YD   +        + + L    K 
Sbjct: 146 CAMMMGCVIERAFKDEYMVNLVRAPEVPVISGAFCYDVVLDSRLDEWIPTKENLRSFTKD 205

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN---VTLYRQGEWFDL 182
              +I +D PF    +  + A E+   +   YK++  E   ++     V L+R G++ D+
Sbjct: 206 AHVLIYKDLPFETLEVDAKVALEI--FQHNKYKIDFTEEKASQNPERIVKLHRIGDFIDV 263

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWN 226
             GP +  T          +++  +    +   ++ R  G +  
Sbjct: 264 SEGPLIPRTS----ICFQYEISAVHSLQPTQPSLIRRFQGLSLP 303


>gi|238504368|ref|XP_002383415.1| prolyl-tRNA synthetase, putative [Aspergillus flavus NRRL3357]
 gi|220690886|gb|EED47235.1| prolyl-tRNA synthetase, putative [Aspergillus flavus NRRL3357]
          Length = 514

 Score =  100 bits (248), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 48/317 (15%), Positives = 107/317 (33%), Gaps = 50/317 (15%)

Query: 338 PMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCT 396
           P             +KS+R+LP+R+ ++   +++E +     L+R   +   + H    T
Sbjct: 98  PNAESVIYPYCRKWIKSHRDLPLRMNQWCIRFQHEQNPQ--PLLRSCEYLLQEVHSAHIT 155

Query: 397 KEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIK 456
           K+    E  +I  L   +Y+D     ++              A +    +I  GV+    
Sbjct: 156 KDSARQEAAQILELYSLLYRDLLAIPVVKGYKN---------AAYLQDTDISTGVVIAYI 206

Query: 457 NSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE 516
            ++   I        G      +E  ++D          +                    
Sbjct: 207 PATNQCIEGAKCHEFGQTLSKAYEITVRDPSATAEPAALLH------------------- 247

Query: 517 KCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVE------ 566
                 + +  +    R +G+M+    +N    LP  ++  Q  +    +S+ +      
Sbjct: 248 ------VWQNCWRISIRALGVMVATHSDNHGLVLPPRIAETQVAIVAAQASSTDEQLILD 301

Query: 567 -YAQEIANLLKSHHLSIETDF-RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRF 624
                + + L S  + ++ D     ++ ++  E  +   P+ I+ G  E + + + I R 
Sbjct: 302 TETDRLVSRLSSAGIRVKVDDLEGYSLGWRFNEWIVSGTPLFIVLGPNEVTNQVVTIGRR 361

Query: 625 GSTTTQKVSLLDAIPIL 641
                +   +  AIP L
Sbjct: 362 DLLHAEG-KVEAAIPEL 377


>gi|320527308|ref|ZP_08028493.1| glycyl-tRNA synthetase [Solobacterium moorei F0204]
 gi|320132332|gb|EFW24877.1| glycyl-tRNA synthetase [Solobacterium moorei F0204]
          Length = 459

 Score =  100 bits (248), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 50/344 (14%), Positives = 108/344 (31%), Gaps = 50/344 (14%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE-LPVRLAEFGSVYRNEPS 374
            N+              T  L+P    G    F    ++YR+ LP  + + G  +RNE +
Sbjct: 148 FNLMFKTFQGTLEDSKNTIYLRPETAQGMFVDFKQVARAYRKKLPFGICQIGKSFRNEIT 207

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
              + + R R F Q +   FC    +  +    +  N  +      G     ++     +
Sbjct: 208 PG-NFIFRTREFEQMEMEFFCKPGTDDEWFPYWR--NFCMDWIVKLGGNPENLRFRDHEK 264

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
           + +                  +  +     I      G G  +G   +    D       
Sbjct: 265 EEL------------------SFYSKGTTDIEYKFPWGWGEVWGIA-DRTDYDLTQHQNT 305

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK--------- 543
            G            +  Y++  + + +   +     G    F     + +          
Sbjct: 306 SGK-----------DLTYLDPITNEKYLPYVVEPAVGVERLFFMFFTDAYDEETLENGET 354

Query: 544 ---GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
                    L+P++A +  +     E A+EI + L S+  ++  D    +I  + R    
Sbjct: 355 RVVMRFNPVLAPVKAAILPLRKKYAEKAEEIRHEL-SYDFTVTYDEAG-SIGKRYRRQDE 412

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
              P  I   ++   + ++ IR   S   +++++ +    + KE
Sbjct: 413 VGTPFCITIDEQTMEDGTVTIRYRDSMEQERMTVEEVRNKICKE 456


>gi|7271933|gb|AAF44696.1|AF239727_1 unknown [Homo sapiens]
          Length = 296

 Score =  100 bits (248), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 42/224 (18%), Positives = 88/224 (39%), Gaps = 24/224 (10%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPEDP---RSLAVIRHS 76
           +T    A  +S    +K++   ++G+  D+  P+ +   I+ +T +D            S
Sbjct: 44  STPYSCAMHLSEWYCRKSILALVDGQPWDMYKPLTKSCEIKFLTFKDCDPGEVNEAYWRS 103

Query: 77  CAHIMAEAVQSIWPEVQV------AIGPIIEDGFYYDFDKEQP-----FSSDELAQIEKK 125
           CA +M   ++  + +  +         P+I   F YD   +        + + L    K 
Sbjct: 104 CAMMMGCVIERAFKDEYMVNLVRAPEVPVISGAFCYDVVLDSKLDEWMPTKENLRSFTKD 163

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN---VTLYRQGEWFDL 182
              +I +D PF    +  + A E+   +   YKV+ +E   ++     V L+R G++ D+
Sbjct: 164 AHALIYKDLPFETLEVEAKVALEI--FQHSKYKVDFIEEKASQNPERIVKLHRIGDFIDV 221

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWN 226
             GP +  T          +V+  +    +   ++ R  G +  
Sbjct: 222 SEGPLIPRTS----ICFQYEVSAVHNLQPTQPSLIRRFQGVSLP 261


>gi|7020559|dbj|BAA91177.1| unnamed protein product [Homo sapiens]
          Length = 258

 Score =  100 bits (248), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 42/224 (18%), Positives = 88/224 (39%), Gaps = 24/224 (10%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPEDP---RSLAVIRHS 76
           +T    A  +S    +K++   ++G+  D+  P+ +   I+ +T +D            S
Sbjct: 6   STPYSCAMHLSEWYCRKSILALVDGQPWDMYKPLTKSCEIKFLTFKDCDPGEVNEAYWRS 65

Query: 77  CAHIMAEAVQSIWPEVQV------AIGPIIEDGFYYDFDKEQP-----FSSDELAQIEKK 125
           CA +M   ++  + +  +         P+I   F YD   +        + + L    K 
Sbjct: 66  CAMMMGCVIERAFKDEYMVNLVRAPEVPVISGAFCYDVVLDSKLDEWMPTKENLRSFTKD 125

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN---VTLYRQGEWFDL 182
              +I +D PF    +  + A E+   +   YKV+ +E   ++     V L+R G++ D+
Sbjct: 126 AHALIYKDLPFETLEVEAKVALEI--FQHSKYKVDFIEEKASQNPERIVKLHRIGDFIDV 183

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWN 226
             GP +  T          +V+  +    +   ++ R  G +  
Sbjct: 184 SEGPLIPRTS----ICFQYEVSAVHNLQPTQPSLIRRFQGVSLP 223


>gi|316961125|gb|EFV48184.1| proline--tRNA ligase [Trichinella spiralis]
          Length = 333

 Score =  100 bits (248), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 50/307 (16%), Positives = 106/307 (34%), Gaps = 47/307 (15%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQ-QSGHWDSYRAN 317
            D SG        + I++ + +++ R+IK  D      P  + Q   + +  H   +   
Sbjct: 41  YDISGCYIIRPWAFAIWEAIQAWLDRQIKLMDVANCYFPMFVSQAALEREKSHVKGFSPE 100

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           +  V  +  +       A++P +     + F+  ++S+R+LP+++ ++ ++ R E     
Sbjct: 101 VAWVTKSGQSEM-SEPVAIRPTSETVMYSSFSKWIQSHRDLPLKINQWCNIVRWEFKHPT 159

Query: 378 HGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
              +R R F   + H     K+    E   I +L   +Y++     ++    T  EK  G
Sbjct: 160 -PFLRSREFLWQEGHTAHANKDDAVKEVHDILDLYARVYEELLAVPVIKGRKTDKEKFAG 218

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
           +D                                    +    E  +  +        + 
Sbjct: 219 AD------------------------------------FTTTIEAYIPTSGRGIQAATSH 242

Query: 497 QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP---- 552
            +  N    F+  Y +  ++K   V   +  +G   R IG+       N  L L P    
Sbjct: 243 HLGQNFSKMFDIVYEHPETQKKENVY--QNSWGLTTRSIGVFTMIHSDNQGLVLPPAVAK 300

Query: 553 IQAIVTT 559
           +Q ++  
Sbjct: 301 VQVVIIP 307


>gi|294933724|ref|XP_002780831.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
 gi|239890922|gb|EER12626.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
          Length = 296

 Score = 99.9 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 73/220 (33%), Gaps = 30/220 (13%)

Query: 453 DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYV 511
           D +       + + +    G       E       GR  Q  T   +  +    F   + 
Sbjct: 15  DLLAVPVVQGVKSEMEKFAGGEATTTCE-AFVACNGRAVQGATSHFLGTHFAKMFGIEFE 73

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTTITSS---- 563
           + + EK       +  +G   R IG+MI     +  L L P    +Q ++  I       
Sbjct: 74  DRNGEKK---FAEQTSWGFTTRSIGVMIMEHGDDKGLVLPPRVAEVQVVIVPIPPKGAGA 130

Query: 564 ----------AVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDK 612
                       E  + +   L ++ + +  D R++ T  YK     +K +P+ I  G K
Sbjct: 131 QWSTAELKTMIGEKCKSLYEDLNANGVRVVLDDRDDKTPGYKFNHWELKGVPLRIEVGAK 190

Query: 613 EASERSIGIRRFGST------TTQKVSLLDAIPILTKESL 646
           +  +  +   R  +           V + +A+  +  E L
Sbjct: 191 DLEKGVVTFVRRNTGKKSQEAEHSSVKVKEALESIQSELL 230


>gi|242018749|ref|XP_002429836.1| prolyl-tRNA synthetase, putative [Pediculus humanus corporis]
 gi|212514854|gb|EEB17098.1| prolyl-tRNA synthetase, putative [Pediculus humanus corporis]
          Length = 379

 Score = 99.9 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 58/336 (17%), Positives = 116/336 (34%), Gaps = 29/336 (8%)

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH 350
             E+  P + D+ ++  SG                       ++ L P        +   
Sbjct: 6   ALEMLLPLLTDKKIFSASGKA-------HLPDLFKFNQNVNESYILNPTCEEIVSELLAS 58

Query: 351 GLK-SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIH 408
             + SY+ LP R  +  S +R+E     +GL+R + F   D + F +  E       ++ 
Sbjct: 59  YTQMSYKNLPCRFYQISSKFRDEKRPK-YGLLRSKEFIMKDLYCFDSTFESSMMTYEEVK 117

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
           N     + + G   ++VK +      + SD  +  A+     ++   K   ++ I    L
Sbjct: 118 NKYKEFFNNLGIPYVVVKGTEGDIGGLKSDEFYFMADVGDNNLVLCQKCGHKECIEFVKL 177

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
             +        +  +           T Q+       FN  Y++  +EK   + +    F
Sbjct: 178 NDQVCSNCQNGDVKI---FKGIEVGHTFQIGTKYSKIFNTNYLSKDNEK---IPVEMCCF 231

Query: 529 G-SIERFIGIMIEN----FKGNLPLWLSPIQAIVTTITSSAVE------YAQEIANLL-K 576
           G  + R +   +E      +   P  + P Q  +     +++E          + N L +
Sbjct: 232 GLGLTRILAASVEVLSSFNEIRWPHSIVPYQVCLIPPKKNSIEERQGGDIVNILFNELYR 291

Query: 577 SHHLSIETDFR-NETINYKIREHSIKKIPIIIICGD 611
           +    +  D R + TI  +I+      +P  II G 
Sbjct: 292 TFGNDLVVDDRTSMTIGKRIQSIKELGLPFAIIIGK 327


>gi|115400861|ref|XP_001216019.1| predicted protein [Aspergillus terreus NIH2624]
 gi|114191685|gb|EAU33385.1| predicted protein [Aspergillus terreus NIH2624]
          Length = 514

 Score = 99.9 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 56/396 (14%), Positives = 133/396 (33%), Gaps = 63/396 (15%)

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQH 303
            +R+   + DLF   +   G        + I++ + + ++ K+K    ++          
Sbjct: 26  WYRQSLEKADLFDDDDQIPGFYILKPASYAIWERICASLKDKLKRMGVQDCAF----PLS 81

Query: 304 LWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLA 363
             + +G       N       +  +++ +             +     + +  +LP+RL 
Sbjct: 82  SLEITGTS---GDNGDPCMDTEPRLRNRQNATS------TIYSCCARWIANPGDLPLRLN 132

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN-ECLKIHNLIISIYKDFGFEK 422
           ++ + +R+EP       +R R     +AH     +   + E L++ ++  ++Y++     
Sbjct: 133 QWKTAFRSEPCPQ--PFLRCRELLIQEAHTAHMTQYEAHEEMLQVLDIYTAVYEELLAVP 190

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           ++  L + P     SD +       +   L+    +                        
Sbjct: 191 LIRGLQSDPNS---SDEVHTAVLFGLVPALEQCIQA------------------------ 223

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
                G   + G  Q+        +   V S +     V + +  +    R IG+M+   
Sbjct: 224 -----GACHELGQ-QMSKEYNITTSDVPVGSQTVSNSTVHVWQNSWNLSIRAIGLMVATH 277

Query: 543 KGNLPLWLSP----IQAIVTTI------TSSAVEYAQ--EIANLLKSHHLSIETDFRNET 590
             N  L L P     Q ++                A+   I +   S  + +  D R+  
Sbjct: 278 GDNRGLVLPPHIAETQVVIIPHQDSRNKNDHHKIRAEILSIQSTFASLGVRVSADLRDWR 337

Query: 591 -INYKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
              +K++E   +  PI ++ G +E + R + + +  
Sbjct: 338 STGWKMKEWITRGAPIRLVFGSEELAGRYVTVCQRD 373


>gi|238916622|ref|YP_002930139.1| uridine kinase [Eubacterium eligens ATCC 27750]
 gi|238871982|gb|ACR71692.1| uridine kinase [Eubacterium eligens ATCC 27750]
          Length = 535

 Score = 99.9 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 37/210 (17%), Positives = 72/210 (34%), Gaps = 3/210 (1%)

Query: 20  HATGSDVAESISRSLAKKAVAVAINGKVCDLSDP-VREGSIEIITPEDPRSLAVIRHSCA 78
             T + +A         + +   +NGK+ +L +  + +  +  +T          R S  
Sbjct: 2   GMTLAQLAAEKQNEYKDEIILANVNGKLKELGEEYIPDSDVTFVTTSTSIGNETYRRSVV 61

Query: 79  HIMAEAVQSIWPEV-QVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFL 137
            +M  A+  I   + +V +   +  G Y  FD +     + + +++  M  ++ +D P  
Sbjct: 62  LLMLAAIDKIHRNIDRVVVEYSLSKGLYCTFDGDFRPDKEFIDEVKSVMYSMVEKDLPIK 121

Query: 138 KQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
           K+ +    A  LF+ K    K   L        V +Y    + D   G    STG +  F
Sbjct: 122 KELMKISDAMNLFKEKGMTDKTS-LFKYRRSSFVNVYDLNGYKDYFYGYMASSTGMLGVF 180

Query: 198 FKLMKVAGAYWRGDSNRPMLSRIYGTAWNT 227
              +   G   +       L          
Sbjct: 181 DIFLYDEGIVLQLPVKNAPLEVPEFNPQTK 210


>gi|308464804|ref|XP_003094666.1| CRE-PARS-2 protein [Caenorhabditis remanei]
 gi|308247063|gb|EFO91015.1| CRE-PARS-2 protein [Caenorhabditis remanei]
          Length = 470

 Score = 99.5 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 69/416 (16%), Positives = 129/416 (31%), Gaps = 52/416 (12%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDL---FHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
            + +   ++         K A    L     I   G G       G ++   L   +  +
Sbjct: 1   MIHKAKKWILSGATAPPSKSAAHRMLIENGFILPTGKGFYSLLPLGQRVIDKLCRILDTE 60

Query: 287 IK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +     +I  P V  + LW ++  WD+    M  ++      +      L+P       
Sbjct: 61  FQKAGAMKIGMPIVGTKTLWDKTKRWDAMGTEMIKLED-----RQKAPLCLQPTAEEMCT 115

Query: 346 AVFNHGLKSYR-ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
            +        + + PV + + G  +R+E +    GLMR R F   D + F T ++   E 
Sbjct: 116 ELIASLPPLKKSQFPVMIYQIGDKFRDEMNPRF-GLMRSRQFLMKDMYTFSTDQEASRET 174

Query: 405 LKIHNLIISIYKDFGFEKI------------------MVKLSTRPEKRVGSDALWDDAEN 446
            +    +    K FG +                    +     + E   G        E 
Sbjct: 175 YRKICRVYE--KIFGQQLQLGGDLIKPISGQNRLNLILNYSLFQVEADSGIHGGHISHEY 232

Query: 447 IMKGVLDTIKNSSQDRINTGVLLGEGAFY--GPKFEYILKDAIGRDWQCGTIQVDFNLPS 504
            ++  LD    +  D   T     +       P  +        R      I   F+L +
Sbjct: 233 HLRSNLDEDFVNLCDSCGTFNKSEDVTTLKKCPNCDSA--HQKSRKVSSVEIAHTFHLGT 290

Query: 505 RFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-----NFKGNLPLWLSPIQAIVT 558
           +++         K     +    FG  + R +   ++          LP  ++P  A + 
Sbjct: 291 KYSETI----GAKFQGKPLDMCCFGIGVSRLLPATVDLLSCSEKAMRLPRAIAPFDAAII 346

Query: 559 T----ITSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIIC 609
                +++  VE     A+        I  D R E +   +I E +   IP II+ 
Sbjct: 347 VKKSLMSNVIVEMTSSSASRYLKGG--ILLDDRIEMSAGRRIHEANRLGIPFIIVL 400


>gi|238926838|ref|ZP_04658598.1| phosphoribulokinase/uridine kinase [Selenomonas flueggei ATCC
           43531]
 gi|238885370|gb|EEQ49008.1| phosphoribulokinase/uridine kinase [Selenomonas flueggei ATCC
           43531]
          Length = 540

 Score = 99.5 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 40/186 (21%), Positives = 83/186 (44%), Gaps = 3/186 (1%)

Query: 22  TGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHI 80
           T   +A+  +++ +   VA  ING+V D+      +  I  I         + + S   +
Sbjct: 4   TLIQLAQEEAQNYSSPIVAAKINGEVRDIQSEYNHDDEISFIELNTALGWRIYQRSVLFL 63

Query: 81  MAEAVQSIWPEVQVAIGPIIEDGFYYDFDKE-QPFSSDELAQIEKKMQEIIARDSPFLKQ 139
              A+ ++  E +V     +  G Y +     Q  +   +  IE++M+ +IA + P LK 
Sbjct: 64  FIVALSNMNKEAEVVAKFTVNKGLYCEVKIPGQSINLRFIQDIEQEMRGMIANNVPILKH 123

Query: 140 YLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFK 199
            +  ++A ELF+++    K  ++ S+P    +++Y    + D   G  +  T  + +F  
Sbjct: 124 GIPRQEAIELFQTRGNRGKAALIASLPH-PMISIYTCCNYPDYLYGAMLPETKLLGQFAL 182

Query: 200 LMKVAG 205
            M+ +G
Sbjct: 183 DMEQSG 188


>gi|256371437|ref|YP_003109261.1| prolyl-tRNA synthetase [Acidimicrobium ferrooxidans DSM 10331]
 gi|256008021|gb|ACU53588.1| prolyl-tRNA synthetase [Acidimicrobium ferrooxidans DSM 10331]
          Length = 572

 Score = 99.5 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 41/194 (21%), Positives = 77/194 (39%), Gaps = 12/194 (6%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD- 289
                    ++E   HR L R   +  +A   SGV      G+++ + + + +  +    
Sbjct: 8   FATQREDPRDAEVASHRLLVRGGYMRALA---SGVWSLLPLGFRVLERIGAIVAEEFDRA 64

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
              ++  P +    LWQ++G   +    +  V         L +  L P +    +A   
Sbjct: 65  GGNQLLLPALHPVELWQETGRNVTMDDVLMRV------DSKLGSLVLGPTHEEAVIAAVG 118

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIH 408
             L SYR LP  + +  + +R+EP  +  GLMR R F   D + F    E M     +++
Sbjct: 119 PDLASYRSLPAFVYQIQTKFRDEPR-ARFGLMRTREFVMADGYTFDVDREHMRVSYQRVY 177

Query: 409 NLIISIYKDFGFEK 422
              + +Y+  G + 
Sbjct: 178 EAYLRVYRRLGLKA 191



 Score = 76.7 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 55/164 (33%), Gaps = 8/164 (4%)

Query: 489 RDWQCGT-IQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE----NFK 543
           R  + G   Q+     SR +           HP  +     G   R I ++ E    +  
Sbjct: 402 RAVEVGHTFQLGQLYSSRMSRGTFVGEDGATHPFWMGCYGIGVS-RLIAVIAEEYQRDGG 460

Query: 544 GNLPLWLSPIQAIVTT--ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
              PL ++P Q  V     +      A  IA  L+     +  + R  +     R+  + 
Sbjct: 461 LAWPLEIAPFQVAVVPAGSSDDVAATAANIAEELERMGRRVLLEDRGLSFGVAARDQELV 520

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
             P+ ++ G +  +   + +R      T  V L D    +  E+
Sbjct: 521 GAPLWVVVGARSLARGEVELRNRVDGRTLTVQLRDVAQAVDAEA 564


>gi|283769575|ref|ZP_06342471.1| glycine--tRNA ligase [Bulleidia extructa W1219]
 gi|283103843|gb|EFC05229.1| glycine--tRNA ligase [Bulleidia extructa W1219]
          Length = 460

 Score = 99.5 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 59/386 (15%), Positives = 122/386 (31%), Gaps = 54/386 (13%)

Query: 270 RKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
            +GW   + + +Y+R        E  +        +           N+           
Sbjct: 115 PEGWS-NEEMENYIREHQMA-CPECGSHDFTPIRQF-----------NLMFKTFQGILED 161

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRE-LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQ 388
              T  L+P    G    F +  ++YR+ LP  + + G  +RNE +   + + R R F Q
Sbjct: 162 SKNTIYLRPETAQGMFVQFKNIQRAYRKKLPFGIGQIGKSFRNEITPG-NFIFRTREFEQ 220

Query: 389 DDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENI 447
            +   F    E         H   +      G     ++     ++ +   + +  A   
Sbjct: 221 MEMEYFVKPGEDDQWFSYWRH-FCMDWILSLGGHAENLRFRDHAKEEL---SFYSKATTD 276

Query: 448 MKGVLDTIKNSSQDRINTGV------LLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFN 501
           +       +         G+       LG+      K +    D I  +     +     
Sbjct: 277 I-----EYQFPWGWGELWGIANRTNYDLGQHEKASGK-DLTYLDPITNEKYLPYVIEPAV 330

Query: 502 LPSR--FNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTT 559
              R  F  F      E+         +     R +              L+P++  V  
Sbjct: 331 GVERLFFMFFTDAYDEEE---------LENGDTRVV--------MRFSPVLAPVKVAVLP 373

Query: 560 ITSS-AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERS 618
           + +    E A+E+ + L + H ++++D    +I  + R       P  I   D+      
Sbjct: 374 LRAKLHGEKAEEVRH-LFAKHFAVQSDGSG-SIGKRYRRQDEIGTPFCITIDDESLENNM 431

Query: 619 IGIRRFGSTTTQKVSLLDAIPILTKE 644
           + +R   S   +++S+ +A+  + KE
Sbjct: 432 VTLRYRDSMAQERMSVEEALQKVQKE 457


>gi|291459602|ref|ZP_06598992.1| phosphoribulokinase family protein [Oribacterium sp. oral taxon 078
           str. F0262]
 gi|291417880|gb|EFE91599.1| phosphoribulokinase family protein [Oribacterium sp. oral taxon 078
           str. F0262]
          Length = 547

 Score = 99.5 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 44/196 (22%), Positives = 69/196 (35%), Gaps = 6/196 (3%)

Query: 16  NFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSD--PVREGSIEIITPEDPRSLAVI 73
           +FP      DVAE       ++ +   +  ++ +L    P R+   E IT  D       
Sbjct: 7   DFPQGTVWKDVAERFQGEYPREILLAKVGPRLYELHKRCPERDMEAEFITAGDKIGNMTY 66

Query: 74  RHSCAHIMAEA---VQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEII 130
           R S   +M +A   V        V +   I  G Y     E   + + L  +++ M+   
Sbjct: 67  RRSAILMMLKAFFNVCEGVEGFDVIVEYSIGGGIYCHLKGELSVTPELLDTVKETMRGYS 126

Query: 131 ARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRS 190
            R  P +K  +  ++A   F       K E L        V LY  G + D   G  V  
Sbjct: 127 ERKLPIMKHSVPTDEAIRFFRRVGMHSK-EHLFRYRMTSRVNLYSLGNFEDYFYGFMVMD 185

Query: 191 TGQVKKFFKLMKVAGA 206
            G ++ F  L    G 
Sbjct: 186 CGYIRLFDLLPYNGGF 201


>gi|317030877|ref|XP_001392403.2| prolyl-tRNA synthetase [Aspergillus niger CBS 513.88]
          Length = 576

 Score = 99.5 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 40/199 (20%), Positives = 74/199 (37%), Gaps = 26/199 (13%)

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK------------ 288
            ++  +  L R   L    +  SG+      G ++   L   + + ++            
Sbjct: 28  EKEDANDLLIRGGFLR---QAYSGIFHMLPLGLRVQDKLERLIDKHMRTVVIEFFLIGWI 84

Query: 289 -DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
                +++   +  Q LW+QSG      + +F  +   ++      F L P +      +
Sbjct: 85  SAGASKVSLSSLSAQELWEQSGRL-KEGSEIFRFQDRKES-----RFLLAPTHEEEITTL 138

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
             H  KSYR+LPVR+ +    YR+E      GL+R R F   D + F   +      LK 
Sbjct: 139 VGHLTKSYRDLPVRVYQISRKYRDEQRPR-QGLLRGREFIMKDLYTF---DYNAENALKT 194

Query: 408 HNLIISIYKDFGFEKIMVK 426
           +  +   Y +   E  +  
Sbjct: 195 YTAVKKAYTELFDELKIPY 213



 Score = 61.0 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 58/140 (41%), Gaps = 12/140 (8%)

Query: 515 SEKCHPVMIHRAVFGS-IERFIGIMIENFKG----NLPLWLSPIQAIVTTITSSAVEYAQ 569
           S+K   V +     G  + R I  + +N       N P  ++P + IV        E A 
Sbjct: 436 SQKDQLVPMQMGCHGIGVSRMISAVADNLADSKGLNWPRAIAPYEVIVVPAKGMEEE-AV 494

Query: 570 EIANLLKSHHL---SIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS 626
           +I + L S       +  D R++ + +K+ +  +   P+I++ G     +R++ ++    
Sbjct: 495 QIYDALTSEPTTALDVILDDRDKQMGWKLGDADLIGYPVIVVVGKGWKKQRTLEVQCRRL 554

Query: 627 TTTQKVSLL---DAIPILTK 643
              + V+L    + +  L +
Sbjct: 555 EVREDVALEALPEFVGSLLE 574


>gi|307298525|ref|ZP_07578328.1| phosphoribulokinase / uridine kinase family protein [Thermotogales
           bacterium mesG1.Ag.4.2]
 gi|306915690|gb|EFN46074.1| phosphoribulokinase / uridine kinase family protein [Thermotogales
           bacterium mesG1.Ag.4.2]
          Length = 555

 Score = 99.5 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/230 (15%), Positives = 75/230 (32%), Gaps = 3/230 (1%)

Query: 12  GSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSL 70
           G   +     +  ++++          +A      + +L   V  E  +E I       +
Sbjct: 12  GKKIHVTKETSFFELSKMCGELHKAPIMAAKSGNSLIELCRNVNGESEVEFIDLFSLDGI 71

Query: 71  AVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEII 130
            +       I+  A++ ++   Q+ +      G   + +  +  + + L QIE++M+E++
Sbjct: 72  RIYTRGALFILFIAIRELFGSAQLNVHHSRGTGLVCNIEGIES-TPENLLQIEERMRELV 130

Query: 131 ARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRS 190
             D  F K  L   +A  LF    +  K  +L     K  V +YR   + +   G    S
Sbjct: 131 KEDIVFEKATLRKFEAIRLFSEDGQRDKA-LLFKYRKKSTVNIYRCKGFINYFYGYMPYS 189

Query: 191 TGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
           TG +  F  +             +                +        E
Sbjct: 190 TGAILNFSLIPYGDYFILNLPDTKQPDRLPKFVDQPKISTIFLEHERWGE 239


>gi|330791908|ref|XP_003284033.1| hypothetical protein DICPUDRAFT_74994 [Dictyostelium purpureum]
 gi|325086079|gb|EGC39475.1| hypothetical protein DICPUDRAFT_74994 [Dictyostelium purpureum]
          Length = 606

 Score = 99.5 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 41/268 (15%), Positives = 94/268 (35%), Gaps = 18/268 (6%)

Query: 269 HRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
                K  + LI  +  +++    +++  P+++ + LW ++G WD++  ++  +K   + 
Sbjct: 85  LPFAQKALENLIKVIDEEMEQVGGQKMTMPKMIPKELWDKTGRWDAFGKDLIKLKDRREN 144

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
                 + + P +     ++  +    +   P++L + G  +R+E      GL+R + F 
Sbjct: 145 -----EYCMGPTHEEVVTSIVGNEKLPFNNFPIKLYQIGEKFRDEIRPRF-GLLRGKEFL 198

Query: 388 QDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
             D + F  TKE       ++     +I          V+  +       S       + 
Sbjct: 199 MKDMYSFDVTKEDAEKTYYQVKQAYHNILDRLELPYACVEADSGNIGGNMSHEFQVVTKA 258

Query: 447 IMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF 506
               ++          I   V        G K +  + D     +    I+ +    ++ 
Sbjct: 259 GEDKLIHCSNCGYHANIEKAV--------GLKSKENINDTFDPIFNIVRIETNQKKNNKH 310

Query: 507 NAFYVN--SHSEKCHPVMIHRAVFGSIE 532
            A  VN    +   + +  H     SIE
Sbjct: 311 IAIVVNDSQDTFNHYSIKKHYNNIKSIE 338



 Score = 43.2 bits (100), Expect = 0.15,   Method: Composition-based stats.
 Identities = 30/186 (16%), Positives = 66/186 (35%), Gaps = 18/186 (9%)

Query: 429 TRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIG 488
            +  K + SD L +  E  +    ++   SS+  I  G+ +G   + G K+         
Sbjct: 394 NKDHKIIDSDILIEAKEGDIC-AQESCNGSSKLGIKKGIEVGHIFYLGNKYSSSFNATSC 452

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPL 548
           ++     +++             +  +         + + G++ +         K   P 
Sbjct: 453 KNNIVKDLEMGCFGIGVSRLLAASVEALSKS----GKEIDGTVTK--------DKITFPK 500

Query: 549 WLSPIQAIVTTITSSAVEYAQEIANLLKSH----HLSIETDFR-NETINYKIREHSIKKI 603
            ++P   I+     S  + A+EI+  L+         I  D R +  + +KI E     I
Sbjct: 501 EITPYHIIIVPKKESLQKDAEEISQQLQQQIPELKGRIIIDDRHDANVGHKIFESKFLGI 560

Query: 604 PIIIIC 609
           P +++ 
Sbjct: 561 PYLLVL 566


>gi|134076914|emb|CAK45323.1| unnamed protein product [Aspergillus niger]
          Length = 497

 Score = 99.1 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 35/159 (22%), Positives = 64/159 (40%), Gaps = 11/159 (6%)

Query: 269 HRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
              G ++   L   + + ++     +++   +  Q LW+QSG      + +F  +   ++
Sbjct: 2   LPLGLRVQDKLERLIDKHMRTVGASKVSLSSLSAQELWEQSGRL-KEGSEIFRFQDRKES 60

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
                 F L P +      +  H  KSYR+LPVR+ +    YR+E      GL+R R F 
Sbjct: 61  -----RFLLAPTHEEEITTLVGHLTKSYRDLPVRVYQISRKYRDEQRPR-QGLLRGREFI 114

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK 426
             D + F   +      LK +  +   Y +   E  +  
Sbjct: 115 MKDLYTF---DYNAENALKTYTAVKKAYTELFDELKIPY 150



 Score = 60.6 bits (145), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 58/140 (41%), Gaps = 12/140 (8%)

Query: 515 SEKCHPVMIHRAVFGS-IERFIGIMIENFKG----NLPLWLSPIQAIVTTITSSAVEYAQ 569
           S+K   V +     G  + R I  + +N       N P  ++P + IV        E A 
Sbjct: 357 SQKDQLVPMQMGCHGIGVSRMISAVADNLADSKGLNWPRAIAPYEVIVVPAKGMEEE-AV 415

Query: 570 EIANLLKSHHL---SIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS 626
           +I + L S       +  D R++ + +K+ +  +   P+I++ G     +R++ ++    
Sbjct: 416 QIYDALTSEPTTALDVILDDRDKQMGWKLGDADLIGYPVIVVVGKGWKKQRTLEVQCRRL 475

Query: 627 TTTQKVSLL---DAIPILTK 643
              + V+L    + +  L +
Sbjct: 476 EVREDVALEALPEFVGSLLE 495


>gi|289616456|emb|CBI56771.1| unnamed protein product [Sordaria macrospora]
          Length = 542

 Score = 99.1 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 39/203 (19%), Positives = 78/203 (38%), Gaps = 15/203 (7%)

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEINTPQVL 300
           +  H KL R   L    +  +G+      G ++   +   + + +++      ++   + 
Sbjct: 25  EDAHSKLIRAGFLR---QSHAGIFHMLPLGKRVQDKVERLVAKHMEESLAASRVSLSSIS 81

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            + LW++SG   +    +F              + L P +      +    ++SY++LP+
Sbjct: 82  SEALWERSGRLQNIAPELFRFLDRKGGA-----YLLSPTHEEEITNLVAQTVRSYKDLPL 136

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD-FG 419
           RL +    +R+E     HGL+R R FT  D + F T        L  +  +   Y   F 
Sbjct: 137 RLYQITRKFRDELRPR-HGLLRGREFTMKDLYTFDTD---LRSALDTYEKVRGAYSRIFN 192

Query: 420 FEKIMVKLSTRPEKRVGSDALWD 442
             K+ V  +      +G D   +
Sbjct: 193 DMKLPVLAAKASSGDMGGDLSHE 215


>gi|269127985|ref|YP_003301355.1| prolyl-tRNA synthetase [Thermomonospora curvata DSM 43183]
 gi|268312943|gb|ACY99317.1| prolyl-tRNA synthetase [Thermomonospora curvata DSM 43183]
          Length = 565

 Score = 99.1 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 41/196 (20%), Positives = 75/196 (38%), Gaps = 12/196 (6%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++           ++E   HR L R   +  +A     +        ++   +I  +R+
Sbjct: 3   WSRFYAPTLRQDPADAETAGHRLLVRAGFIRRLAAGHYSL---LPPAARVRSKIIEVIRQ 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++     +E+  P +    LW+++G WD+     F +     T +     AL   +    
Sbjct: 60  EMDRIGAQEVLLPALQPAELWRRNGRWDASGEETFRL-----TDRKGAEAALGTTHEEV- 113

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           VA     L SYR LP    +F + +R+E      GL+ +R FT  DA+     E      
Sbjct: 114 VASLATELGSYRRLPQLWYQFQTAFRDEARPR-SGLLGLREFTLKDAYSLDADEAALEGS 172

Query: 405 LKIHN-LIISIYKDFG 419
            + H      I++  G
Sbjct: 173 FQAHREAYRRIFQRLG 188



 Score = 87.9 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 56/174 (32%), Gaps = 20/174 (11%)

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
            P  E       GR                  A  +     +  P+M   ++   +ER I
Sbjct: 400 TPAIEVAHLRKPGRRCT-----------EALGARVLGPDGTEITPLMGRYSI--GVERAI 446

Query: 536 GIMIE----NFKGNLPLWLSPIQAIVT---TITSSAVEYAQEIANLLKSHHLSIETDFRN 588
             + E    +     P  ++P    VT            A++I   L +  +    D R+
Sbjct: 447 AAIAETGHDDSGLRWPAGIAPFDVAVTLLDPRDDQVTAAAEQIYTALAAAGVETILDDRD 506

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           E    K  +  +  IP  +  G +     ++ I+   +  T  V + +A   +T
Sbjct: 507 ERPGAKFADTELIGIPYRVTVGKRGLKSGTVEIKTRATGRTDTVPIPEAAARVT 560


>gi|291238092|ref|XP_002738958.1| PREDICTED: threonyl-tRNA synthetase 2, mitochondrial-like
           [Saccoglossus kowalevskii]
          Length = 331

 Score = 99.1 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 42/238 (17%), Positives = 94/238 (39%), Gaps = 18/238 (7%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAV---IRHS 76
           +T  ++A   ++    ++    +NG++ D+  P+  +  + ++  +      V      S
Sbjct: 75  STPYNIAMHFNKFYRDRSALALVNGELWDMLRPLTDDCEVTLLHFKSDDPREVNKAYWRS 134

Query: 77  CAHIMAEAVQSIWPEVQV------AIGPIIEDGFYYDFDKE---QPFSSDELAQIEKKMQ 127
           C+H++   + S +              P+    F YD D +      ++ EL  + ++  
Sbjct: 135 CSHMLGNIIDSAFKNDYFIELVKVPDIPVTAGCFAYDADLKMDSWKPTTKELMCLGQEGF 194

Query: 128 EIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPH 187
            +  +  PF +  +    A ++F+     YK + +E    + ++ LYR G++ D+  GP 
Sbjct: 195 RLYEQSLPFERLEVDTSIALQIFK--HNQYKKQQIEEC-GRSSIVLYRCGDFVDISDGPM 251

Query: 188 VRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           V +TG  + +   +          S+R  L R  G A         +  +    E+  
Sbjct: 252 VTNTGFARNY--SVTAVHDIISKTSSRGCLQRFQGVALPRDFYKIHHTTWEPIEERAS 307


>gi|169334057|ref|ZP_02861250.1| hypothetical protein ANASTE_00450 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258774|gb|EDS72740.1| hypothetical protein ANASTE_00450 [Anaerofustis stercorihominis DSM
           17244]
          Length = 466

 Score = 99.1 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 62/381 (16%), Positives = 121/381 (31%), Gaps = 63/381 (16%)

Query: 283 MRRKIKDDYEE---INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPM 339
              +  + Y E   I  P                ++      + + +TI       L+P 
Sbjct: 125 WSNEKMEGYIEENNIVCPNCGKHDFTGIRQFNLMFKTFQGVTEDSVNTI------YLRPE 178

Query: 340 NCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK- 397
            C G    F +  +S  ++LP  + + G  +RNE +   + + R R F Q +   FC   
Sbjct: 179 TCQGIFINFKNVQRSTRKKLPFGIGQVGKSFRNEITPG-NFIFRTREFEQMELEFFCEPK 237

Query: 398 -EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIK 456
            E  + E  + +     +      E I  +   + +    S+A  D              
Sbjct: 238 DEMKWFEYWRQYCFDFLVSLGIDKENIKFRDHAKEQLSHYSNATTD-------------- 283

Query: 457 NSSQDRINTGVLLGEGAFYGPK--FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH 514
                 I      G G  +G     ++ LK                    +   +     
Sbjct: 284 ------IEYNYPFGWGELWGIADRTDFDLK-------------SHEEFSGKDMKYVDPIT 324

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP------------LWLSPIQAIVTTITS 562
           +EK HP  I     G+   F  ++ +N+                  +L+P +  V  +T 
Sbjct: 325 NEKFHPYCIE-PSVGAGRLFFTLLCDNYVEETLEDGTTRNVFKLHPYLAPYKVAVLPLTK 383

Query: 563 SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
              E A E+ + L + +  ++ D     I  + R       P  +        + ++ +R
Sbjct: 384 KLSEEATEVYSKL-AKYFMVDYDEAGN-IGKRYRRQDEIGTPYCVTIDFDTKEDGAVTVR 441

Query: 623 RFGSTTTQKVSLLDAIPILTK 643
              +   ++V + D    +TK
Sbjct: 442 DRDTMEQERVKIDDLADYITK 462


>gi|110802427|ref|YP_698667.1| phosphoribulokinase / uridine kinase family protein [Clostridium
           perfringens SM101]
 gi|110682928|gb|ABG86298.1| phosphoribulokinase/uridine kinase family protein [Clostridium
           perfringens SM101]
          Length = 551

 Score = 99.1 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 47/191 (24%), Positives = 90/191 (47%), Gaps = 8/191 (4%)

Query: 26  VAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAEA 84
           + E I  +LAK+        K  + +D +  +G +E+I   DP        +   +  +A
Sbjct: 30  INEKIPITLAKQR------NKYYEFTDLINNDGDVELINISDPHGKIAYSRTLQFVFIKA 83

Query: 85  VQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHE 144
              ++ E ++ I   I  G + +  KE+  + +++ +I++KMQEII ++    K  +  +
Sbjct: 84  TLDLFKEARINIEHSISKGTFGEIHKEKALNEEDILKIKRKMQEIINKNIIIEKIKMPKK 143

Query: 145 KARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVA 204
           +A ++F+S K   KV++L  +     V LY+  + +D   G    STG +K F  L    
Sbjct: 144 EAIDIFKSYKMQDKVDLLHWVQED-YVNLYKLEDRYDYFYGDMAYSTGILKYFDLLYYNP 202

Query: 205 GAYWRGDSNRP 215
           G      S++ 
Sbjct: 203 GFILMVPSHKE 213


>gi|260654799|ref|ZP_05860287.1| phosphoribulokinase/uridine kinase family protein [Jonquetella
           anthropi E3_33 E1]
 gi|260630514|gb|EEX48708.1| phosphoribulokinase/uridine kinase family protein [Jonquetella
           anthropi E3_33 E1]
          Length = 545

 Score = 99.1 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 39/198 (19%), Positives = 90/198 (45%), Gaps = 7/198 (3%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           MP  I + FP  +         G+++        A+ AVA+ +N  +  LS  +  + ++
Sbjct: 1   MP--ITVEFPSQNSVQLNQPILGTELFALYPP--ARPAVAMRVNHYLRPLSWQIDADAAV 56

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDEL 119
             +       + V R++ +  +  A      +  + +   I D  Y+ F+     +  ++
Sbjct: 57  TPVDTSTFEGVWVYRNTLSFALIMACHRALGK-GLTVRHSISDALYWVFNDGTAMTPSDV 115

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A I+ +++ ++A D P  ++ LS +K   +F ++ +    ++L  + A + V +YR  + 
Sbjct: 116 ASIDAELRRLVAADMPIQREILSLDKVVRIFNAQGKQDTAKLLA-LTAVDPVEVYRSADL 174

Query: 180 FDLCRGPHVRSTGQVKKF 197
           +    GP + S G++ +F
Sbjct: 175 YCCFYGPLMPSMGELDRF 192


>gi|328777880|ref|XP_003249412.1| PREDICTED: 39S ribosomal protein L39, mitochondrial-like [Apis
           mellifera]
          Length = 331

 Score = 98.7 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 41/238 (17%), Positives = 95/238 (39%), Gaps = 25/238 (10%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSL---AVIRHS 76
           +T +D A  IS  L+K +    ++G   D++ P+     ++++    P +    A    +
Sbjct: 74  STPTDCARHISEGLSKVSALALVDGSPWDMNKPLTSSCKLKLLNLLSPENKVVNAAFWRT 133

Query: 77  CAHIMAEAVQSIWP-----EVQVAIGPIIEDG-----FYYDFDKEQPFSSDELAQIEKKM 126
           C+ I+   +   +       +     P+I+ G      Y D +  +P + + +  +  + 
Sbjct: 134 CSFILGAVIDMAFKPDIEIHLHSFPIPVIKSGSFIYDVYLDLNNWEPVTQE-MRALSAQF 192

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESI--PAKENVTLYRQGEWFDLCR 184
            +++ ++ P  +   +   A ++   +    K++ +  I       +TLYR G   D+ +
Sbjct: 193 IKLVNQELPIERIDTTESVALDI--FQNNPIKLKQIPEIVKSNNNKITLYRIGNHIDISK 250

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           GP + ++        + +          N+  + R  G A      L Q+ Y L E+ 
Sbjct: 251 GPMIGNSS------LIGRCTITAVHEVPNKEKIYRFQGVALPKGILLNQFAYSLLENR 302


>gi|256092161|ref|XP_002581846.1| threonyl-tRNA synthetase [Schistosoma mansoni]
 gi|238668125|emb|CAZ38086.1| threonyl-tRNA synthetase, putative [Schistosoma mansoni]
          Length = 91

 Score = 98.7 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 41/83 (49%), Positives = 61/83 (73%)

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
           + +TF LKPMNCPGH  ++   ++S++ELP+R A+FG ++RNE SG+L GL RVR F QD
Sbjct: 9   EKQTFGLKPMNCPGHCLMYAKEIRSHKELPLRFADFGVLHRNEFSGALSGLTRVRRFQQD 68

Query: 390 DAHVFCTKEQMFNECLKIHNLII 412
           DAH+FC ++Q+ N    +H + +
Sbjct: 69  DAHIFCREDQVTNSFEIVHIIYM 91


>gi|164422625|ref|XP_958617.2| hypothetical protein NCU09892 [Neurospora crassa OR74A]
 gi|157069749|gb|EAA29381.2| predicted protein [Neurospora crassa OR74A]
          Length = 631

 Score = 98.7 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 78/202 (38%), Gaps = 13/202 (6%)

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEINTPQVL 300
           +  H KL R   L    +  +G+      G ++   +   + + +++      ++   + 
Sbjct: 111 EDAHSKLVRAGFLR---QSHAGIFHMLPLGKRVQDKVERLVAKHMEESLAASRVSLSSIS 167

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            + LW++SG   +    +F       +      + L P +      +    ++SY++LP+
Sbjct: 168 SEALWERSGRLPNIAPELFRFPDRKGSA-----YLLSPTHEEEITYLVAQTVRSYKDLPL 222

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           RL +    +R+E     HGL+R R F   D + F T      +  +      S  + F  
Sbjct: 223 RLYQITRKFRDELRPR-HGLLRGREFIMKDLYTFDTDLTSALDTYEKVRAAYS--RIFND 279

Query: 421 EKIMVKLSTRPEKRVGSDALWD 442
            K+ V  +      +G D   +
Sbjct: 280 MKLPVLAAKASSGDMGGDLSHE 301


>gi|328869252|gb|EGG17630.1| prolyl-tRNA synthetase [Dictyostelium fasciculatum]
          Length = 642

 Score = 98.7 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 35/241 (14%), Positives = 84/241 (34%), Gaps = 10/241 (4%)

Query: 202 KVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED 261
           +    +   +  +    +I      ++  +        + E    + L ++  +  I   
Sbjct: 53  RNDYPFPVEEEGKTGAKKIVHRLLRSKLFIPVVRDQPMDKEMSQSQLLMQKTGM--IRRA 110

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
             G+        +  + LI  +  +++    +++  P ++ + LW+++G W++  A +  
Sbjct: 111 SLGMYMTLPLAQRAMENLIKIIDEEMQGVGGQKLTMPLLVSKDLWEKTGRWETTGAELIK 170

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
           VK   +       + L P +     ++  +   S    P+RL + G+ YR+E      GL
Sbjct: 171 VKDRKE-----EEYCLAPTHEEIFTSLVANERLSNSNFPLRLYQIGNKYRDEIRPRF-GL 224

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDA 439
           +R R F   D + F                    ++   G +   V+  +       S  
Sbjct: 225 VRGREFLMKDLYSFDQTRVEAVATYNDIKGAYHRVFDRVGLKYACVEADSGNIGGSMSHE 284

Query: 440 L 440
            
Sbjct: 285 F 285



 Score = 44.4 bits (103), Expect = 0.055,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 51/130 (39%), Gaps = 13/130 (10%)

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPL-W- 549
           + G I       S      +   + K  P+ +     G   R +  MIE+ + +  + W 
Sbjct: 472 EVGHIFYLGTKYSSKLGANMKDKNGKNQPIEMGCYGIGVS-RLLAAMIESKRDDRGIVWS 530

Query: 550 --LSPIQAIVTTITS----SAVEYAQEIANLL-KSHHLSIETDFRNE---TINYKIREHS 599
             ++P +AI+   +      + E A+ + +LL +   L  +    N    +I  +I E +
Sbjct: 531 KCVAPYKAIIIPFSDQRNRGSYESAEHLYDLLIRDPFLRNQIVLENRLDMSIGKRINEAN 590

Query: 600 IKKIPIIIIC 609
           +   P +I  
Sbjct: 591 LIGFPYLIFV 600


>gi|150866832|ref|XP_001386559.2| prolyl-tRNA synthetase, cytoplasmic [Scheffersomyces stipitis CBS
           6054]
 gi|149388088|gb|ABN68530.2| prolyl-tRNA synthetase, cytoplasmic [Scheffersomyces stipitis CBS
           6054]
          Length = 572

 Score = 98.7 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 42/206 (20%), Positives = 80/206 (38%), Gaps = 16/206 (7%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-D 290
                F        H  L +      I +  +G++ W   G  I   +   +RR++ +  
Sbjct: 18  NHVDTFNYSKNLPTHELLVQLN---LINQPRAGLVNWSPIGLTIMNKISDIIRRRMDEIS 74

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH 350
           +EE+    +     W+++G WD+  + +F +K           + L P      V   ++
Sbjct: 75  FEEVKLSLLSHHSSWRKTGRWDN-SSELFKLK--------GEEYILSPTAEEDIVNYVSN 125

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
              SY+ LP+   +    +RNE      GL+R + F   DA+ F   E+      +  ++
Sbjct: 126 NSSSYKNLPLLYYQINPKFRNEKRPR-GGLLRGKEFMMKDAYSFDASEKDAMTTYQ--SV 182

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRVG 436
           I +  K FG  K+    +      +G
Sbjct: 183 IGAYTKIFGDLKLPYTKAEADSGDIG 208


>gi|34541370|ref|NP_905849.1| phosphoribulokinase family protein [Porphyromonas gingivalis W83]
 gi|34397687|gb|AAQ66748.1| phosphoribulokinase family protein [Porphyromonas gingivalis W83]
          Length = 529

 Score = 98.7 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 40/221 (18%), Positives = 77/221 (34%), Gaps = 2/221 (0%)

Query: 27  AESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPEDPRSLAVIRHSCAHIMAEAV 85
           AE     L  +     +N    DL   + E   +   +  D   +     + + I+++AV
Sbjct: 2   AEYFQDDLGFRPFNAQVNHCTRDLGFRLYEPSDVLFASFSDESGMRTYVRTLSFILSKAV 61

Query: 86  QSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEK 145
             I P  ++ I   + +G+Y         +  E+ +I+++M+ +I  D PF       E+
Sbjct: 62  ADILPGSKLFIEHSLSNGYYCQIKNAHMITPGEIVRIKERMESLIVADIPFRAHCERTEE 121

Query: 146 ARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAG 205
              +F S     K ++LE+         Y    + D   G    STG +  F     + G
Sbjct: 122 VAAMFRSMGYEDKADLLETKGM-PYSRYYDLDGYPDYYYGSLAPSTGYIGLFGLEPYLDG 180

Query: 206 AYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDH 246
              R                   +++      L +  +  H
Sbjct: 181 VLLRIPRRDKPEELAPFVPQPMMRQVFADHDRLLDILQVTH 221


>gi|409905|gb|AAD12408.1| Homology to threonyl-tRNA synthetase M36594 [Mycoplasma genitalium]
          Length = 114

 Score = 98.3 bits (243), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 6/120 (5%)

Query: 427 LSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDA 486
                 K + +  LW ++E+ M+ VL  +    Q  I      G  AFYGPK ++  K  
Sbjct: 1   DPKNQSKFIDNPGLWRESESQMENVLKDLNIQYQKEI------GAAAFYGPKIDFQFKTI 54

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNL 546
             +     TIQ+DF LP +F+  Y++  +    PV+IH  + G+ ERFI  ++E   GN 
Sbjct: 55  FKKMITIATIQLDFLLPEKFDLTYIDKKNTLKKPVIIHVGIIGTYERFIAALLEKTSGNF 114


>gi|330834490|ref|YP_004409218.1| Ser-tRNA(Thr) hydrolase [Metallosphaera cuprina Ar-4]
 gi|329566629|gb|AEB94734.1| Ser-tRNA(Thr) hydrolase [Metallosphaera cuprina Ar-4]
          Length = 386

 Score = 98.3 bits (243), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 27/106 (25%), Positives = 54/106 (50%), Gaps = 3/106 (2%)

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E    +LPLWLSPI   V  +T S  E   + +  LK   + ++ D  +E I  KIR   
Sbjct: 261 EKQTPSLPLWLSPIHVRVLKLTES--EEVDKFSLSLKERGIRVQVDDLDEGIGKKIRRAG 318

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           +  IP + I G++E   +++ ++    +  + +++ + +  + +E+
Sbjct: 319 MDWIPYVAIVGERELQTKNLTVKVRDGSEQKPMTVEE-LEKVVREA 363


>gi|242768112|ref|XP_002341505.1| prolyl-tRNA synthetase [Talaromyces stipitatus ATCC 10500]
 gi|218724701|gb|EED24118.1| prolyl-tRNA synthetase [Talaromyces stipitatus ATCC 10500]
          Length = 641

 Score = 98.3 bits (243), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 41/220 (18%), Positives = 79/220 (35%), Gaps = 15/220 (6%)

Query: 234 YLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYE 292
                E  ++  +  L R      I +  SG+      G ++   L + + R ++     
Sbjct: 54  ERKAAETVKEDANDLLIRAG---FIRQAYSGIFHMLPLGLRVQNKLEALIDRHMESLGAS 110

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           +++   +  Q LW+++G   S  + +F      ++      F L P +     ++    +
Sbjct: 111 KVSLSSLSSQELWEKTGRLKS-GSEVFKFNDRKES-----RFLLAPTHEEEITSLVASLV 164

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLI 411
            SY+ELP+RL +    YR+E      GL+R R F   D + F    EQ            
Sbjct: 165 NSYKELPLRLYQITRKYRDEARPR-QGLLRGREFVMKDLYTFDYNAEQALATYEATREAY 223

Query: 412 ISIYKDFGFEKIMVKLSTRPEKRVGSDALW---DDAENIM 448
             I+       ++    +       S       D  E+ +
Sbjct: 224 KRIFDTLKVPYLVAAADSGNMGGNLSHEFHFISDKGEDTL 263



 Score = 55.6 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 49/248 (19%), Positives = 94/248 (37%), Gaps = 21/248 (8%)

Query: 413 SIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI-NTGVLLGE 471
           S YK        V   +RP    G    +D  +  ++  L      ++D +  T VL G+
Sbjct: 391 SAYKILDIYDSQVAPYSRPPLS-GLPENFDKVKYPVEFALLNRFPGTKDGLSLTRVLDGD 449

Query: 472 GAFYGPKFEYILKDA--IGRDWQCGTIQVDFNLPSRFNAFYVNSHSE------KCHPVMI 523
                 +    + +A  +G  +  GT   +      F    V   +E      K   V +
Sbjct: 450 KCHKCSEGSLHMHNAVELGHTFYLGTRYSEVLKAKVFVDNSVIKSNESSTNSNKSQNVPM 509

Query: 524 HRAVFGS-IERFIGIMIENF----KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSH 578
                G  + R I  + +        N P  ++P + IV    +   E A+ I +LL+ H
Sbjct: 510 EMGCHGIGVSRMISAVADARSDIRGLNWPRAIAPFEIIVVPARNLEPE-AENIYDLLRQH 568

Query: 579 HLSIET--DFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI--RRFGSTTTQKVSL 634
             + +   D R + + +K+++  +   PI+I+ G    SE  + +  R+      + V L
Sbjct: 569 TDTSDIILDDRTKQVGWKLKDADLIGYPIVIVLGKAWKSEHKVEVHCRQLDGL-REDVPL 627

Query: 635 LDAIPILT 642
            + +  + 
Sbjct: 628 GNLVEYVR 635


>gi|311270165|ref|XP_003132793.1| PREDICTED: 39S ribosomal protein L39, mitochondrial-like [Sus
           scrofa]
          Length = 334

 Score = 97.9 bits (242), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 40/192 (20%), Positives = 81/192 (42%), Gaps = 20/192 (10%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPEDPRSLAV---IRHS 76
           +T    A  +S    +K++   ++G+  D+  P+ +   I+ +T +D     V      S
Sbjct: 83  STPYSCAMHLSEWYCRKSILALVDGQPWDMYKPLTKSCEIKFLTFKDDDPGEVNKAYWRS 142

Query: 77  CAHIMAEAVQSIWPEVQV------AIGPIIEDGFYYDFDKEQP-----FSSDELAQIEKK 125
           CA +M   ++  + +  V         P+I   F YD   ++       + + L    K 
Sbjct: 143 CAMMMGCVIERAFKDEYVVSLVRAPEVPVIAGAFCYDVVLDKRLDEWMPTKENLHSFTKD 202

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN---VTLYRQGEWFDL 182
            + +I +D PF    +  + A E+   +   YK++ +E   ++     V L+R G++ D+
Sbjct: 203 ARALIYKDLPFETLEVEAKVALEI--FQHNKYKLDFIEEKASQNPERIVKLHRFGDFIDV 260

Query: 183 CRGPHVRSTGQV 194
             GP +  T   
Sbjct: 261 SEGPLIPRTSIC 272


>gi|119630387|gb|EAX09982.1| mitochondrial ribosomal protein L39, isoform CRA_d [Homo sapiens]
          Length = 359

 Score = 97.9 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 46/275 (16%), Positives = 97/275 (35%), Gaps = 35/275 (12%)

Query: 21  ATGSDVAE------SISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPEDPRSLAV- 72
           +T    A        +S    +K++   ++G+  D+  P+ +   I+ +T +D     V 
Sbjct: 86  STPYSCAMLCFKFLDLSEWYCRKSILALVDGQPWDMYKPLTKSCEIKFLTFKDCDPGEVN 145

Query: 73  --IRHSCAHIMAEAVQSIWPEVQV------AIGPIIEDGFYYDFDKEQP-----FSSDEL 119
                SCA +M   ++  + +  +         P+I   F YD   +        + + L
Sbjct: 146 KAYWRSCAMMMGCVIERAFKDEYMVNLVRAPEVPVISGAFCYDVVLDSKLDEWMPTKENL 205

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN---VTLYRQ 176
               K    +I +D PF    +  + A E+   +   YKV+ +E   ++     V L+R 
Sbjct: 206 RSFTKDAHALIYKDLPFETLEVEAKVALEI--FQHSKYKVDFIEEKASQNPERIVKLHRI 263

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQEL----- 231
           G++ D+  GP +  T          +V+  +    +   ++ R  G +            
Sbjct: 264 GDFIDVSEGPLIPRTS----ICFQYEVSAVHNLQPTQPSLIRRFQGVSLPVHLRAHFTIW 319

Query: 232 TQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVI 266
            + L    +        L      F  + +   + 
Sbjct: 320 DKLLERSRKMTPFPILLLFTTQSFFTTSPESYLLH 354


>gi|315123805|ref|YP_004065809.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|315017527|gb|ADT65620.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
          Length = 134

 Score = 97.9 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 48/132 (36%), Positives = 73/132 (55%), Gaps = 2/132 (1%)

Query: 34  LAKKAVAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQ 93
           + K+ +A   N  + D          EI       SL VIRHSCAH+MA+A++S++PE +
Sbjct: 1   MEKEVIAYLDNETIIDSQSVKNTNLKEIYFDNSKESLEVIRHSCAHLMAQAIKSLYPEAK 60

Query: 94  VAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESK 153
             +GP+IEDGFYYDF  E     ++L +IEKKM+E+       LK  ++  +A    + +
Sbjct: 61  FFVGPVIEDGFYYDFRVESKIGEEDLVKIEKKMKELAEAKIEILKYEITKNEALA--KFQ 118

Query: 154 KEAYKVEILESI 165
            +  K E+L  I
Sbjct: 119 NDDLKQEVLLRI 130


>gi|255711434|ref|XP_002552000.1| KLTH0B04906p [Lachancea thermotolerans]
 gi|238933378|emb|CAR21562.1| KLTH0B04906p [Lachancea thermotolerans]
          Length = 568

 Score = 97.5 bits (241), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 39/168 (23%), Positives = 78/168 (46%), Gaps = 11/168 (6%)

Query: 255 LFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDD--YEEINTPQVLDQHLWQQSGHWD 312
           L +I +  SG++ W   G +    + + ++ +++ D   EE++   +  + LW  +  WD
Sbjct: 37  LGYIKQTQSGLVHWLPLGLRTLNKITNIIKHRMETDGKAEEVSLSLLSPKSLWVHTNRWD 96

Query: 313 SYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE 372
           +    +F +K +         + L P       ++    + SY++LP+ + + G  YR+E
Sbjct: 97  N--GELFKLKDSK-----GSDYCLAPTCEEEITSLIGSYVTSYKDLPMTVYQVGRKYRDE 149

Query: 373 PSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFG 419
                 GL+R R F   DA+ F  +KE+       +++    I+KD G
Sbjct: 150 KRPR-GGLLRGREFLMKDAYSFDASKEEAVRTFESMNHTYDLIFKDLG 196



 Score = 46.3 bits (108), Expect = 0.016,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 46/132 (34%), Gaps = 8/132 (6%)

Query: 486 AIGRDWQCGT-IQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           +  R  + G    +        NA +    + + +  M    +   + R +G +    + 
Sbjct: 377 SSKRSIEVGHTFFLGQKYSEPLNAKFSTRENTEEYCEMGCYGI--GVSRLVGAIAHVTRD 434

Query: 545 NLPL-WLSPIQAIVTTITS-SAVEYAQEIANLLKSHHLSIETDFRNET--INYKIREHSI 600
           +  L W   +     +I +    E   E+  LL S    +    R+E   +  KI     
Sbjct: 435 DAGLRWPRAVAPYEISICAAKQDELVAEVEGLLSSWGREVWV-NRDEKAGLGRKIAASHS 493

Query: 601 KKIPIIIICGDK 612
             IP+ +I G K
Sbjct: 494 LGIPVCVIVGKK 505


>gi|168217778|ref|ZP_02643403.1| putative threonyl-tRNA synthetase/uridine kinase [Clostridium
           perfringens NCTC 8239]
 gi|182380136|gb|EDT77615.1| putative threonyl-tRNA synthetase/uridine kinase [Clostridium
           perfringens NCTC 8239]
          Length = 551

 Score = 97.5 bits (241), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 53/213 (24%), Positives = 95/213 (44%), Gaps = 13/213 (6%)

Query: 15  KNFPVHATGSDVA----ESISRSLAKKAV-------AVAINGKVCDLSDPVR-EGSIEII 62
           K+F V+  G  +     E  S  L K  +        V    K  + +D +  +G IE+I
Sbjct: 2   KSFRVNVNGESLLFNEGEKYSAILKKDYINEKIPITLVKQGNKYYEFTDLINNDGDIELI 61

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
              DP        +   +  +A   ++ + ++ I   I  G + +  KE+    +++ +I
Sbjct: 62  NISDPHGKIAYSRTLQFVFIKATLDLFKDARINIEHSISKGTFGEIHKEKALDEEDILKI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           +KKMQEII ++    K  +  ++A ++F+S K   KV++L  +   E V LY+  + +D 
Sbjct: 122 KKKMQEIINKNIIIEKIKMPKKEAIDIFKSYKMQDKVDLLHWVQE-EYVNLYKLEDRYDY 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRP 215
             G    STG +K F  L    G      S++ 
Sbjct: 181 FYGDMAYSTGVLKYFDLLYYNPGFILMVPSHKE 213


>gi|18310329|ref|NP_562263.1| uridine kinase [Clostridium perfringens str. 13]
 gi|18145009|dbj|BAB81053.1| probable uridine kinase [Clostridium perfringens str. 13]
          Length = 554

 Score = 97.5 bits (241), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 44/172 (25%), Positives = 82/172 (47%), Gaps = 2/172 (1%)

Query: 45  GKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG 103
            K  + +D +  +G IE+I   DP        +   +  +A   ++ + ++ I   I  G
Sbjct: 46  NKYYEFTDLINNDGDIELINISDPHGKIAYSRTLQFVFIKATLDLFKDARINIEHSISKG 105

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE 163
            + +  KE+    +++ +I+KKMQEII ++    K  +  ++A ++F+S K   KV++L 
Sbjct: 106 TFGEIHKEKALDEEDILKIKKKMQEIINKNIIIEKIKMPKKEAIDIFKSYKMQDKVDLLH 165

Query: 164 SIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRP 215
            +   E V LY+  + +D   G    STG +K F  L    G      S++ 
Sbjct: 166 WVQE-EYVNLYKLEDRYDYFYGDMAYSTGVLKYFDLLYYNPGFILMVPSHKE 216


>gi|157113280|ref|XP_001657757.1| mitochondrial 39S ribosomal protein L39 [Aedes aegypti]
 gi|108877802|gb|EAT42027.1| mitochondrial 39S ribosomal protein L39 [Aedes aegypti]
          Length = 284

 Score = 97.5 bits (241), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 48/232 (20%), Positives = 97/232 (41%), Gaps = 20/232 (8%)

Query: 21  ATGSDVAESISRSLAK-KAVAVAINGKVCDLSDPVRE-GSIEIITPEDPRSL---AVIRH 75
           +T  D A+ I     +  A+A+  N    D+  P+ E  +++++                
Sbjct: 28  STPHDCAKHIGEKYCRFSALALLDNNTAWDMRRPLEESCTLQLLNFTSADPHLVNKACWR 87

Query: 76  SCAHIMAEAVQSIWPE-----VQVAIGPIIEDG-FYYDFD---KEQPFSSDELAQIEKKM 126
           +C+ ++   +   + +     +     P ++ G F +D          +S EL  +  +M
Sbjct: 88  TCSFLLGSVLHKSFKDEAGLFLHSFPKPNVKTGSFVHDIALSKNGWKPTSQELRALSIEM 147

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN--VTLYRQGEWFDLCR 184
            ++  +D P  +  ++ E A+++       YK E + SI ++ N  +T+YR G+  D+ +
Sbjct: 148 IKLSQQDLPIERLDVTSEVAQQM--FSDNPYKREQIPSISSQNNGLITVYRVGDHVDISK 205

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           GP V STG V K            +  +++  L R+ G A      L  + Y
Sbjct: 206 GPMVSSTGLVGKCTIAAIHEVP--KSSADKLSLYRVQGVALPIGLNLNHFAY 255


>gi|157113278|ref|XP_001657756.1| mitochondrial 39S ribosomal protein L39 [Aedes aegypti]
 gi|108877801|gb|EAT42026.1| mitochondrial 39S ribosomal protein L39 [Aedes aegypti]
          Length = 333

 Score = 97.5 bits (241), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 48/232 (20%), Positives = 97/232 (41%), Gaps = 20/232 (8%)

Query: 21  ATGSDVAESISRSLAK-KAVAVAINGKVCDLSDPVRE-GSIEIITPEDPRSL---AVIRH 75
           +T  D A+ I     +  A+A+  N    D+  P+ E  +++++                
Sbjct: 77  STPHDCAKHIGEKYCRFSALALLDNNTAWDMRRPLEESCTLQLLNFTSADPHLVNKACWR 136

Query: 76  SCAHIMAEAVQSIWPE-----VQVAIGPIIEDG-FYYDFD---KEQPFSSDELAQIEKKM 126
           +C+ ++   +   + +     +     P ++ G F +D          +S EL  +  +M
Sbjct: 137 TCSFLLGSVLHKSFKDEAGLFLHSFPKPNVKTGSFVHDIALSKNGWKPTSQELRALSIEM 196

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN--VTLYRQGEWFDLCR 184
            ++  +D P  +  ++ E A+++       YK E + SI ++ N  +T+YR G+  D+ +
Sbjct: 197 IKLSQQDLPIERLDVTSEVAQQM--FSDNPYKREQIPSISSQNNGLITVYRVGDHVDISK 254

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           GP V STG V K            +  +++  L R+ G A      L  + Y
Sbjct: 255 GPMVSSTGLVGKCTIAAIHEVP--KSSADKLSLYRVQGVALPIGLNLNHFAY 304


>gi|217031454|ref|ZP_03436959.1| hypothetical protein HPB128_21g12 [Helicobacter pylori B128]
 gi|216946654|gb|EEC25250.1| hypothetical protein HPB128_21g12 [Helicobacter pylori B128]
          Length = 517

 Score = 97.5 bits (241), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 43/237 (18%), Positives = 77/237 (32%), Gaps = 23/237 (9%)

Query: 288 KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
           +   + I    V+   LW++SG  D Y   +   K   +       F L P        +
Sbjct: 3   EHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKNN-----DFVLSPTLEENITEI 57

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLK 406
             + +KSY++LPV L +  + +R+E      GL+R R F   D + F    E +  E L 
Sbjct: 58  AANFIKSYKQLPVHLYQIHTKFRDEIRPRF-GLVRAREFIMKDGYSFHEDAESLDKEFLN 116

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
             +    I  D G +  +V+  +       S             VL      +       
Sbjct: 117 TQSAYKEILSDLGLDFRIVEADSGAIGGSKSKEF---------VVLTECGEDT------- 160

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
           +++ +   Y    E   +            Q+         +    +   K  P  +
Sbjct: 161 IVVCKNCDYAANIEIAKRSKRPEPSNVPKAQLAKFPTPNTTSTQSVAEFFKTEPYFV 217



 Score = 64.0 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 21/176 (11%), Positives = 56/176 (31%), Gaps = 10/176 (5%)

Query: 475 YGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           + P  +  LK    +  + G I  +         A +++ +  K     +     G    
Sbjct: 340 HCPNCQGALK--YHKSLEVGHIFKLGQGYAKSLKASFLDKNG-KEQFFEMGCYGIGISRL 396

Query: 534 FIGIMIENFKGNLPLWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFR 587
              I+ +       +W    +P   ++        +  + A E+   L    +    D R
Sbjct: 397 LSAILEQKSDDLGCVWTKNTAPFDVVIVVSNWKDEAQKKLAFEVYERLLQKGVDALLDDR 456

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +     K+R+  +    + +I G +    +     +  +   Q +  ++    + +
Sbjct: 457 DARFGAKMRDFELIGERLALIVGKQTLENKEFECVKRANLEKQTIKDIELEEKILE 512


>gi|256069251|ref|XP_002571081.1| threonyl-tRNA synthetase [Schistosoma mansoni]
 gi|238652067|emb|CAZ38766.1| threonyl-tRNA synthetase, putative [Schistosoma mansoni]
          Length = 155

 Score = 97.2 bits (240), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 51/162 (31%), Positives = 71/162 (43%), Gaps = 39/162 (24%)

Query: 400 MFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSS 459
           + +E     + +  +Y  FGF    + LSTRPEK +G   +WD AE  +K  LD +    
Sbjct: 1   IKDEIKSCLDFLRYVYGVFGF-SFELYLSTRPEKYMGEIEMWDRAEKQLKESLDEVG--- 56

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS------ 513
              +   +  G+GAFYGPK +  + DA+ R  QC TIQ+DF LP RFN  Y +       
Sbjct: 57  ---LKWELNPGDGAFYGPKIDINIMDALRRRHQCATIQLDFQLPVRFNLSYASETDNPSG 113

Query: 514 --------------------------HSEKCHPVMIHRAVFG 529
                                           PV+IHRA+ G
Sbjct: 114 SDNNCNNVSNTTNAISNHHEPTNHQTDLNTHRPVIIHRAILG 155


>gi|159479048|ref|XP_001697610.1| organellar class II aminoacyl tRNA synthetase [Chlamydomonas
           reinhardtii]
 gi|158274220|gb|EDP00004.1| organellar class II aminoacyl tRNA synthetase [Chlamydomonas
           reinhardtii]
          Length = 580

 Score = 97.2 bits (240), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 53/420 (12%), Positives = 141/420 (33%), Gaps = 48/420 (11%)

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
             E   + +  +  + +L         ++     G+ I++++   +  + K+   +    
Sbjct: 88  RSEDFSKWYLDVVAKAELADYGPVRGTMVI-RPYGYSIWESVQGVLDARFKELGVQNAYF 146

Query: 297 PQVLDQHL-WQQSGHWDSYRANMFAVK------CADDTIKDLRTFALKPMNCPGHVAVFN 349
           PQ++      +++ H + +   +  V          +T++     +++P  C       +
Sbjct: 147 PQLIPYSFITKEAEHVEGFAPELALVTKGGVCVGGGNTVRRRSVRSVRPCTCTCVGVCCH 206

Query: 350 ---HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
                ++SYR+LP+ + ++ +V+R E        +R   F   + H      +      +
Sbjct: 207 VLWGWVQSYRDLPLLINQWCNVHRWEMR--TRPFVRTLEFLWQEGHTAHATAEEAEAEAR 264

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
               +I +Y  F      + +    + R+ S A      +    +    +  +       
Sbjct: 265 A---MIDVYTHFATHTAAMPVVPGRKSRIESFAGGRRGRDGGGAIKSMWQTQTGSAPAPA 321

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
                                        +    +L +  +   ++      H  +  + 
Sbjct: 322 AAYS---------------PPYPSHYVHHLAPAPHLYTNSHPISLH----LMHLCVFDQT 362

Query: 527 VFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVEYA------QEIANLLK 576
            +G   R IG +I    ++    LP  L+PIQ ++  I     +          +A   K
Sbjct: 363 SWGVSTRIIGGVIMTHGDDKGLRLPPRLAPIQVVIIPIVKKEEDRVPVNEAAARLAAAAK 422

Query: 577 SHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERS-IGIRRFGSTTTQKVSL 634
           +  + ++ D     T  +K     ++ +P+ +  G K+    + +  RR      +++ +
Sbjct: 423 AAGIRVKVDMDERQTPGWKYNHWEMRGVPVRVEVGPKDVQSGTCVTARRDMGKEGKQMGV 482


>gi|212542487|ref|XP_002151398.1| prolyl-tRNA synthetase [Penicillium marneffei ATCC 18224]
 gi|210066305|gb|EEA20398.1| prolyl-tRNA synthetase [Penicillium marneffei ATCC 18224]
          Length = 641

 Score = 97.2 bits (240), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 41/220 (18%), Positives = 78/220 (35%), Gaps = 15/220 (6%)

Query: 234 YLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYE 292
                E  ++  +  L R      I +  SGV      G ++   L + +   ++     
Sbjct: 54  ERKAAETEKEDANDLLIRAG---FIRQAYSGVFHMLPLGLRVQNKLEALIDTHMQSLGAS 110

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           +++   +  Q LW+++G   S  + +F      ++      F L P +     ++    +
Sbjct: 111 KVSLSSLSSQELWEKTGRLKS-GSEVFKFNDRKES-----RFLLAPTHEEEITSLVASLV 164

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLI 411
            SY+ELP+RL +    YR+E      GL+R R F   D + F    EQ            
Sbjct: 165 NSYKELPLRLYQISRKYRDEARPR-QGLLRGREFVMKDLYTFDYNAEQALATYEATREAY 223

Query: 412 ISIYKDFGFEKIMVKLSTRPEKRVGSDALW---DDAENIM 448
             I+       ++    +       S       D  E+ +
Sbjct: 224 KRIFDTLKVPYLVAAADSGNMGGNLSHEFHFISDKGEDTL 263



 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 84/228 (36%), Gaps = 26/228 (11%)

Query: 436 GSDALWDDAENIMKGVLDTIKNSSQDRI-NTGVLLGEGAFYGPKFEYILKDA-----IGR 489
           G    +D A+  ++  L      S+D +  T V+ GE     PK             +G 
Sbjct: 413 GLPEDFDKAKYPVEFALLNRFPDSKDGLSLTRVVEGEK---CPKCSKGFLHTHNAVELGH 469

Query: 490 DWQCGTIQVDFNLPSRFNAFYVNSHSE------KCHPVMIHRAVFGS-IERFIGIMIENF 542
            +  GT   +      F        +E      K   V +     G  + R I  + +  
Sbjct: 470 TFYLGTRYSEVLKAKVFVDSSATKSNESDSNSNKPQNVPMEMGCHGIGVSRMISAVADAC 529

Query: 543 ----KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIET--DFRNETINYKIR 596
                 N P  ++P + IV    +   E A+ + +LL+    + +   D R + + +K++
Sbjct: 530 SDVRGLNWPRAIAPFEIIVVPARNLESE-AENVYDLLRQQTDTSDVILDDRTKHVGWKLK 588

Query: 597 EHSIKKIPIIIICGD--KEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +  +   PI+++ G   + A +  +  R+      + V + + I  + 
Sbjct: 589 DADMIGYPIVVVVGKAWQWAQKLEVHCRQLDGL-REDVPVDNLIDYIR 635


>gi|77409695|ref|ZP_00786360.1| prolyl-tRNA synthetase [Streptococcus agalactiae COH1]
 gi|77171693|gb|EAO74897.1| prolyl-tRNA synthetase [Streptococcus agalactiae COH1]
          Length = 549

 Score = 97.2 bits (240), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 29/124 (23%), Positives = 56/124 (45%), Gaps = 6/124 (4%)

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           +  P +L   LW++SG +++Y  +++ +K      +D   F L P +      +    +K
Sbjct: 1   MLAPALLTADLWRESGRYETYGEDLYKLKN-----RDQSDFILGPTHEETFTTLVRDAVK 55

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           SY++LP+ L +  S YR+E     +GL+R R F   D + F    +  +   + +     
Sbjct: 56  SYKQLPLNLYQIQSKYRDEKRPR-NGLLRTREFIMKDGYSFHKDYEDLDVTYEDYRKAYE 114

Query: 414 IYKD 417
               
Sbjct: 115 AIFT 118



 Score = 66.7 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/173 (19%), Positives = 63/173 (36%), Gaps = 22/173 (12%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------- 541
           R  + G I       S      +   + + +P+++     G   R +  +IE        
Sbjct: 373 RGIEIGHIFKLGTRYSDSMGANILDENGRSNPIVMGCYGIGVS-RILSAVIEQHARLFVN 431

Query: 542 ----------FKGNLPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRN 588
                     +  N P  L+P    + T+      + +  ++I   L      + TD RN
Sbjct: 432 KTPKGAYRFAWGINFPEELAPFDVHLITVNVKDQESQDLTEKIEADLMLKGYEVLTDDRN 491

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           E +  K  +  +  +PI +  G K ASE  + ++   S  T +V   + I  L
Sbjct: 492 ERVGSKFSDSDLIGLPIRVTVGKK-ASEGIVEVKIKASGDTIEVHADNLIETL 543


>gi|295110286|emb|CBL24239.1| Uridine kinase [Ruminococcus obeum A2-162]
          Length = 555

 Score = 97.2 bits (240), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 38/208 (18%), Positives = 84/208 (40%), Gaps = 5/208 (2%)

Query: 12  GSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSL 70
           G  + +P   T  ++ + I        + V +NGK+ +L   ++ + ++E +T +D    
Sbjct: 12  GETRMYPEGTTYREIVDEIGIHTETPVILVMVNGKLRELQKRLKSDCTLEFVTTKDHIGF 71

Query: 71  AVIRHSCAHIMAEAVQSIWPE---VQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQ 127
              + S   ++  A+  +       +V I   + +G+Y+  + +     D L +++ +M 
Sbjct: 72  ETYKRSVCLVLLRAIYDVAGRENVDKVMIHYSVGNGYYFTMEGKAALDQDFLDKVKIQMH 131

Query: 128 EIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPH 187
           ++    +P  K+ ++ ++A  LF   +   K E L        V +Y  G + D   G  
Sbjct: 132 KLADECTPIGKRSVNTDEAVALFHKHRMYDK-EKLFRFRRVSKVNIYNIGYYDDYFYGYM 190

Query: 188 VRSTGQVKKFFKLMKVAGAYWRGDSNRP 215
               G V+ F   +   G        + 
Sbjct: 191 ADHAGYVQYFDLKLYDEGFVLELPERKN 218


>gi|330837180|ref|YP_004411821.1| AAA ATPase [Spirochaeta coccoides DSM 17374]
 gi|329749083|gb|AEC02439.1| AAA ATPase [Spirochaeta coccoides DSM 17374]
          Length = 586

 Score = 97.2 bits (240), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 39/161 (24%), Positives = 77/161 (47%), Gaps = 2/161 (1%)

Query: 38  AVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAI 96
            VA+  N ++  LS  +R    +  +         V RHS   +++ A   ++P  ++ I
Sbjct: 69  IVAILANNELLPLSGRLRANCVLTPVRLYSEHGKRVYRHSICFLLSRAAHELFPGRRLVI 128

Query: 97  GPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEA 156
           G  + DG+Y+ FD EQ   S ++ ++ ++MQ I+         +LS++++ + F +    
Sbjct: 129 GHSLGDGYYFSFDDEQSVPSMDIRKLSERMQVIVEAAESVENIHLSYQQSMDYFTAMGFT 188

Query: 157 YKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
               ILE    +  ++LYR G + D+   P V +T  +  +
Sbjct: 189 QTRSILE-YRNEPLISLYRSGSYVDIAYEPLVYNTSIMALW 228


>gi|317155666|ref|XP_001825276.2| prolyl-tRNA synthetase [Aspergillus oryzae RIB40]
          Length = 627

 Score = 96.8 bits (239), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 40/253 (15%), Positives = 85/253 (33%), Gaps = 19/253 (7%)

Query: 191 TGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLA 250
                  F+  +     +  D    + +    T   +++ +      + +   R      
Sbjct: 16  YRAYCGVFRFHRTPSCSFHTDGRTRVSNFWIPTGGISKKNIQGEKEDVNDLLVRGGFLRQ 75

Query: 251 REMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSG 309
               +FH+             G ++   L   + + ++     +++   +  Q LW++SG
Sbjct: 76  AYSGIFHM----------LPLGLRVQDKLERLIDKHMRSVGASKVSLSSISSQELWERSG 125

Query: 310 HWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVY 369
                 + +F      ++      F L P +      +     KSYR+LP+R+ +    Y
Sbjct: 126 RLGE-GSEVFKFHDRKES-----RFLLAPTHEEEITTLVGSLAKSYRDLPLRVYQISRKY 179

Query: 370 RNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLS 428
           R+EP     GL+R R F   D + F CT E+       +      ++ D     ++    
Sbjct: 180 RDEPRPR-QGLLRGREFIMKDLYTFDCTVEEALETYTSVKAAYTRLFNDLKIPYLVAAAD 238

Query: 429 TRPEKRVGSDALW 441
           +       S    
Sbjct: 239 SGNMGGNLSHEFH 251



 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 88/246 (35%), Gaps = 20/246 (8%)

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG- 472
            Y+        V++  RP      D      E+I   +LD    ++       V  G+  
Sbjct: 384 PYRVVDMYDSQVRVYKRPPLSDLLDQAGCKVEDIDYSMLDRFPGTNNGLSLVKVQDGDKC 443

Query: 473 ---AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF-NAFYVNSHSEKCHPVMIHRAVF 528
              A    K +  ++  +G  +  GT   +    S   +     S   +  P+ +     
Sbjct: 444 AKCAQGRVKTQVAVE--LGHTFHLGTRYSEVLQASVMVDQSSSGSSEHQVVPMQMGCHGI 501

Query: 529 GSIERFIGI---MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLK---SHHLSI 582
           G       +   + ++   N P  ++P + IV        E A++I + L    +  + +
Sbjct: 502 GVSRMITAVADSLADSKGLNWPRAVAPFEVIVVP-AKGLEEEAEKIYDTLTSDPASPVDV 560

Query: 583 ETDFRNETINYKIREHSIKKIPIIIICGD--KEASERSIGIRRFGSTTTQKVSLLD---A 637
             D R++ + +K+ +  +   PII++ G   K+     +  R+  +   + V L      
Sbjct: 561 ILDDRDKQMGWKLGDADLIGYPIIVVVGKGWKKEQTLEVQCRQLDNL-RENVPLEQLSTF 619

Query: 638 IPILTK 643
           I  L +
Sbjct: 620 IRSLLE 625


>gi|238498424|ref|XP_002380447.1| prolyl-tRNA synthetase [Aspergillus flavus NRRL3357]
 gi|220693721|gb|EED50066.1| prolyl-tRNA synthetase [Aspergillus flavus NRRL3357]
          Length = 627

 Score = 96.8 bits (239), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 40/253 (15%), Positives = 85/253 (33%), Gaps = 19/253 (7%)

Query: 191 TGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLA 250
                  F+  +     +  D    + +    T   +++ +      + +   R      
Sbjct: 16  YRAYCGVFRFHRTPSCSFHTDGRTRVSNFWIPTGGISKKNIQGEKEDVNDLLVRGGFLRQ 75

Query: 251 REMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSG 309
               +FH+             G ++   L   + + ++     +++   +  Q LW++SG
Sbjct: 76  AYSGIFHM----------LPLGLRVQDKLERLIDKHMRSVGASKVSLSSISSQELWERSG 125

Query: 310 HWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVY 369
                 + +F      ++      F L P +      +     KSYR+LP+R+ +    Y
Sbjct: 126 RLGE-GSEVFKFHDRKES-----RFLLAPTHEEEITTLVGSLAKSYRDLPLRVYQISRKY 179

Query: 370 RNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLS 428
           R+EP     GL+R R F   D + F CT E+       +      ++ D     ++    
Sbjct: 180 RDEPRPR-QGLLRGREFIMKDLYTFDCTVEEALETYTSVKAAYTRLFNDLKIPYLVAAAD 238

Query: 429 TRPEKRVGSDALW 441
           +       S    
Sbjct: 239 SGNMGGNLSHEFH 251



 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 43/253 (16%), Positives = 88/253 (34%), Gaps = 34/253 (13%)

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
            Y+        V++  RP      D      E+I   +LD    ++       V  G+  
Sbjct: 384 PYRVVDMYDSQVRVYKRPPLSDLLDQAGCKVEDIDYSMLDRFPGTNNGLSLVKVQDGDKC 443

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDF--NLPSRF----------NAFYVNSHSEKCHPV 521
                     K A GR      I++    +L +R+          +     S   +  P+
Sbjct: 444 ---------AKCAQGRVKTQVAIELGHTFHLGTRYSEVLQASVMVDQSSSGSSEHQVVPM 494

Query: 522 MIHRAVFGSIERFIGI---MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLK-- 576
            +     G       +   + ++   N P  ++P + IV        E A++I + L   
Sbjct: 495 QMGCHGIGVSRMITAVADSLADSKGLNWPRAVAPFEVIVVP-AKGLEEEAEKIYDTLTSD 553

Query: 577 -SHHLSIETDFRNETINYKIREHSIKKIPIIIICGD--KEASERSIGIRRFGSTTTQKVS 633
            +  + +  D R++ + +K+ +  +   PII++ G   K+     +  R+  +   + V 
Sbjct: 554 PASPVDVILDDRDKQMGWKLGDADLIGYPIIVVVGKGWKKEQTLEVQCRQLDNL-RENVP 612

Query: 634 LLD---AIPILTK 643
           L      I  L +
Sbjct: 613 LEQLSTFIRSLLE 625


>gi|302657268|ref|XP_003020359.1| hypothetical protein TRV_05552 [Trichophyton verrucosum HKI 0517]
 gi|291184187|gb|EFE39741.1| hypothetical protein TRV_05552 [Trichophyton verrucosum HKI 0517]
          Length = 581

 Score = 96.8 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 37/160 (23%), Positives = 66/160 (41%), Gaps = 13/160 (8%)

Query: 255 LFHIAE------DGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQ 307
           +F I           GV      G ++ + L   + + ++  +  +++   +  Q LW++
Sbjct: 12  IFWIPSGGIAESKNGGVFHLLPLGLRVQEKLERLIDKHMRKLNASKLSLSSLSSQALWKK 71

Query: 308 SGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGS 367
           SG      + +F       T      F L P +      V +  +KSYR+LP+R+ +   
Sbjct: 72  SGRLHDDDSEVFRFVDRKKTP-----FLLAPTHEEEITTVVSGLIKSYRDLPLRVYQISR 126

Query: 368 VYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
            YR+EP    HGL+R R F   D + F + E    +    
Sbjct: 127 KYRDEPRPR-HGLLRGREFVMKDLYTFDSTEAEAIKTYNT 165



 Score = 59.8 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/136 (22%), Positives = 52/136 (38%), Gaps = 11/136 (8%)

Query: 517 KCHPVMIHRAVFGS-IERFIG----IMIENFKGNLPLWLSPIQAIVTTIT--SSAVEYAQ 569
           K  PV I     G  + R I     I+ +    N P  ++P Q  V          E   
Sbjct: 441 KQEPVPIQMGCHGIGVSRMISAVSDILADEKGLNWPQAIAPFQVAVVPGKGLEKEGELVY 500

Query: 570 EIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE-ASERSIGI--RRFGS 626
           +I        +    D R +   +K+R+  +   PII+  G     +   + +  RR G+
Sbjct: 501 DIVTQTTQQPIDTILDDRKKDFAWKLRDADMIGYPIILAVGKNSWGAGNKVEVQCRRLGN 560

Query: 627 TTTQKVSLLDAIPILT 642
             T+ VSL +   +++
Sbjct: 561 LRTK-VSLEEVPELVS 575


>gi|71024203|ref|XP_762331.1| hypothetical protein UM06184.1 [Ustilago maydis 521]
 gi|46101855|gb|EAK87088.1| hypothetical protein UM06184.1 [Ustilago maydis 521]
          Length = 735

 Score = 96.8 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 71/188 (37%), Gaps = 8/188 (4%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
           ++    SG+        +I   + + +  ++       I  P +L   LW Q+G +    
Sbjct: 86  YVRSSSSGIFTLLPNALRIVGKITNIIDEQLCAIHASRIAMPNLLPSKLWHQTGRYTVMG 145

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
           + ++ ++   ++      F L P +      +  + + S R+LP+RL +  + +R+EP  
Sbjct: 146 SELYKLRDRKNS-----EFVLGPTHEEEITKLVANQVDSDRQLPLRLYQITTKFRDEPRP 200

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
            + GL+R + F   D + F       N    ++      I+            +      
Sbjct: 201 RM-GLLRTKEFLMKDLYSFDKSAADANTTYEEVRAAYARIFDRIFGVDGRWTAAEADTGA 259

Query: 435 VGSDALWD 442
           +G +   +
Sbjct: 260 IGGNKSHE 267


>gi|258569006|ref|XP_002585247.1| predicted protein [Uncinocarpus reesii 1704]
 gi|237906693|gb|EEP81094.1| predicted protein [Uncinocarpus reesii 1704]
          Length = 598

 Score = 96.8 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 47/226 (20%), Positives = 89/226 (39%), Gaps = 15/226 (6%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
            I +  SG+      G ++ Q L + + + ++     +++   +  Q LW++SG  +   
Sbjct: 41  FIRQAYSGIFHLLPLGLRVQQKLENLIDKHMQSIGASKLSLSSLSSQELWKRSGRLND-D 99

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
           + +F         +   +F L P +     A+    +KSYR+LP+R+ +    YR+EP  
Sbjct: 100 SEIFRFND-----RKGASFLLAPTHEEEITALVGSLVKSYRDLPLRVYQITRKYRDEPRP 154

Query: 376 SLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              GL+R R F   D + F  + E+  +    +  +   I+ D     ++    +     
Sbjct: 155 R-QGLLRGREFLMKDLYTFDYSAEKGLDTYNTVKEVYTRIFDDLRLPYLVAAADSGNMGG 213

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
             S     +  N    V+     S     N  +  G     GPK E
Sbjct: 214 DLSHEFHFENPNGEDTVITCTNCSH--AFNEEIADGR----GPKVE 253



 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/106 (16%), Positives = 46/106 (43%), Gaps = 7/106 (6%)

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLL---KSHHLSIETDFRNETINY 593
           ++ ++     P  ++P  A V        + A+++ + L   +   +    D R+ T  +
Sbjct: 484 MLADHKGLKWPQVIAPFSA-VICFGKGFEQDAEQVYDALVSGQMSPIDAVLDDRSHTFPW 542

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGI--RRFGSTTTQKVSLLDA 637
           K+++  +   P+I++ G +  S + + +  R+  +     V L + 
Sbjct: 543 KLKDADLIGFPVILVLGKQWRSSKLVEVQCRQLDNFKD-DVPLNEL 587


>gi|255722445|ref|XP_002546157.1| prolyl-tRNA synthetase [Candida tropicalis MYA-3404]
 gi|240136646|gb|EER36199.1| prolyl-tRNA synthetase [Candida tropicalis MYA-3404]
          Length = 559

 Score = 96.8 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 47/210 (22%), Positives = 85/210 (40%), Gaps = 16/210 (7%)

Query: 228 QQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI 287
           +    Q   F    +   H  L +   L  I    SG++ W + G  I   + S +R ++
Sbjct: 14  KLYGNQLSKFKYSKDIPTHELLTK---LGFITYPRSGLVNWSKSGLLIQNKISSIIRSRM 70

Query: 288 KD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA 346
            +  +EE++   +  + LWQ++G WD         K  +    +   + L P        
Sbjct: 71  DEIGFEELSLSLISYKKLWQETGRWD---------KSTEIFKLEGDEYLLVPTAEEEITD 121

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
             N  L+SY++LP+ + +    +RNE      GL+R + F   DA+ F   E       +
Sbjct: 122 YINKNLESYKQLPILMYQINPKFRNEKRPR-GGLLRGKEFLMKDAYSFDLDESNAMNTYE 180

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
              ++ + +K FG  KI    +      +G
Sbjct: 181 --KVVGAYHKIFGDLKIPYVKAQADSGDIG 208



 Score = 49.8 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/104 (22%), Positives = 42/104 (40%), Gaps = 6/104 (5%)

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVEY 567
                    +M+     G I R I  +     ++   N P  ++P +     I     E 
Sbjct: 396 AEGGMNKQTIMMGCYGIG-ISRIIAAIAQINRDSKGLNWPRSIAPWEVTAVEIGQD-EER 453

Query: 568 AQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
            +E+  LL    +    D RNE++  K+++ ++  IP+ II G 
Sbjct: 454 TKEVFKLLNHGKIDYRLDDRNESMGKKLKQSNLMGIPLSIILGK 497


>gi|52631983|gb|AAU85385.1| glutaminyl-tRNA synthetase [Sus scrofa]
          Length = 337

 Score = 96.4 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 35/216 (16%), Positives = 69/216 (31%), Gaps = 26/216 (12%)

Query: 450 GVLDTIKNSSQDRINTGVLLGE--------GAFYGPKFEYILKDAIGRDWQCGTIQVDFN 501
            +LD      ++ +   V+ G         G  Y    E     A GR  Q  T      
Sbjct: 13  QILDLYAQVYEELLAIPVVKGRKTEKEKFAGGDYTTTVE-AFISASGRAIQGATSHHLGQ 71

Query: 502 LPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIV 557
             S+                  ++  +G   R IG+M      N+ L L P    +Q +V
Sbjct: 72  NFSKMFEIVFEDPKTPGEKQFAYQNSWGLTTRTIGVMTMVHGDNMGLVLPPRVACVQVVV 131

Query: 558 TT----------ITSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPII 606
                          + +    +    L S ++ +  D R+  +  +K     +K +P+ 
Sbjct: 132 IPCGITNALAEEDRDALMAKCHDYERRLVSVNIRVRVDLRDNYSPGWKFNHWELKGVPVR 191

Query: 607 IICGDKEASERS-IGIRRFGSTTTQKVSLLDAIPIL 641
           +  G ++      + +R   +     ++  +A   L
Sbjct: 192 LEVGPRDMKSCQFVAVR-RDTGEKLTLAENEAETKL 226


>gi|52079348|ref|YP_078139.1| threonyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52784711|ref|YP_090540.1| hypothetical protein BLi00937 [Bacillus licheniformis ATCC 14580]
 gi|319646868|ref|ZP_08001097.1| hypothetical protein HMPREF1012_02134 [Bacillus sp. BT1B_CT2]
 gi|52002559|gb|AAU22501.1| threonyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52347213|gb|AAU39847.1| conserved hypothetical protein [Bacillus licheniformis ATCC
          14580]
 gi|317391456|gb|EFV72254.1| hypothetical protein HMPREF1012_02134 [Bacillus sp. BT1B_CT2]
          Length = 441

 Score = 96.4 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 29/73 (39%), Positives = 46/73 (63%), Gaps = 2/73 (2%)

Query: 4  DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEII 62
           I++  PDGS++ F   A+  DVA SIS  L + AVA  +NGK+ DLS P+++G+ +EI+
Sbjct: 2  SIRIKLPDGSVREFEEEASIEDVAASISCGL-EHAVAGKLNGKLVDLSTPLQDGALVEIV 60

Query: 63 TPEDPRSLAVIRH 75
          T +      ++R 
Sbjct: 61 TRDSAEGQKIVRE 73


>gi|218282283|ref|ZP_03488582.1| hypothetical protein EUBIFOR_01164 [Eubacterium biforme DSM 3989]
 gi|218216751|gb|EEC90289.1| hypothetical protein EUBIFOR_01164 [Eubacterium biforme DSM 3989]
          Length = 476

 Score = 96.4 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 50/340 (14%), Positives = 105/340 (30%), Gaps = 43/340 (12%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+              T  L+P    G    F +  ++  ++LP  + + G  +RNE +
Sbjct: 164 FNLMFKTFQGVLEDAKSTIYLRPETAQGIFVNFKNVQRTMRKKLPFGIGQIGKSFRNEIT 223

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              + + R R F Q +   FC      +         +   KD G  +  ++L      R
Sbjct: 224 PG-NFIFRTREFEQMELEFFCKPGTDLDWFEYYCKNCVQFLKDLGINEENIRL------R 276

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
                      N    +              G+          + ++ LK          
Sbjct: 277 AHDPEELAHYSNGTSDIEYHFSEPIGWGELWGIAD--------RTDFDLKA--------- 319

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP------- 547
                    S+ N  Y +  + + +   +     G     + +M E ++           
Sbjct: 320 -----HQTTSKQNLEYFDQEANEKYIPYVIEPSVGVERLMLAVMCEAYQEEQLENDSRVV 374

Query: 548 ----LWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
                 L+P +  V  ++    +   E+   L  H  S+  D   ++I  + R       
Sbjct: 375 LKLHPALAPYKVAVLPLSKKLSDQGDEVFAKLSKH-FSVTYDD-AQSIGKRYRRQDAIGT 432

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           P  +    + A++  + IR   +   ++V+L D +  +  
Sbjct: 433 PFCVTVDFETANDGCVTIRDRDTMQQERVALDDLVSYIEN 472


>gi|149246389|ref|XP_001527664.1| prolyl-tRNA synthetase [Lodderomyces elongisporus NRRL YB-4239]
 gi|146447618|gb|EDK42006.1| prolyl-tRNA synthetase [Lodderomyces elongisporus NRRL YB-4239]
          Length = 557

 Score = 96.4 bits (238), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 43/216 (19%), Positives = 78/216 (36%), Gaps = 17/216 (7%)

Query: 228 QQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI 287
           +    Q   F  + +   H  LA+   L  I+   SG++ W + G  I   +   +R  +
Sbjct: 7   KLYCHQLGKFKTDIQVPTHELLAK---LGIISYPHSGLVHWGKTGLLIQDKINGIVRENL 63

Query: 288 KD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA 346
               YEE+    +  ++LW Q+G W             D        + L P        
Sbjct: 64  DHLGYEELKLSLLSHKNLWLQTGRWHQ----------PDLFKLQNDEYLLAPTAEEEITE 113

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
                ++SY+ LPV   +    +R E      GL+R R F   DA+ F   E    +  +
Sbjct: 114 YVKRSIQSYKHLPVGYYQINEKFRAEKRPR-GGLLRGREFLMKDAYSFDIDETSALKTYE 172

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWD 442
             +++ + +  F    +    +      +G D   +
Sbjct: 173 --SMVNAYHNIFREIGVPYVKAQADSGDIGGDLSHE 206



 Score = 52.5 bits (124), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 41/105 (39%), Gaps = 10/105 (9%)

Query: 512 NSHSEKCHPVMIHRAVFGS-IERFIGIMIE----NFKGNLPLWLSPIQAIVTTITSSAVE 566
           N +        +    +G  I R I  + E    +     P  ++P +A + T  +S VE
Sbjct: 396 NDNGNTLESRFVKMGCYGIGISRIIAAVAEINRDDRGLRWPASIAPWEATIITDDASKVE 455

Query: 567 YAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
               + + L         D R+E   YK +  +   IP+II+ G 
Sbjct: 456 ---AVESQLMQIDCR--LDGRDERFGYKFKASTTMGIPLIIVLGK 495


>gi|315049859|ref|XP_003174304.1| prolyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
 gi|311342271|gb|EFR01474.1| prolyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
          Length = 631

 Score = 96.0 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 37/165 (22%), Positives = 64/165 (38%), Gaps = 10/165 (6%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQH 303
             +  L R   L       SGV      G ++ + L   + + ++       +   L   
Sbjct: 60  DSNDLLIRAGFLRQPY---SGVFHLLPLGLRVQEKLERLIDKHMRKLSASKLSLSSLSSQ 116

Query: 304 L-WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             W++SG   +  + +F       T      F L P +      + +  +KSYR+LP+R+
Sbjct: 117 ALWKKSGRLHNDDSEVFRFVDRKKTP-----FLLAPTHEEEITTLVSGLIKSYRDLPLRV 171

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
            +    YR+EP    HGL+R R F   D + F + E    +    
Sbjct: 172 YQISRKYRDEPRPR-HGLLRGREFVMKDLYTFDSTEGEAIKTYNT 215



 Score = 60.6 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 53/136 (38%), Gaps = 11/136 (8%)

Query: 517 KCHPVMIHRAVFGS-IERFIG----IMIENFKGNLPLWLSPIQAIVTTIT--SSAVEYAQ 569
           K  PV I     G  + R I     I+ +    N P  ++P Q  V          E   
Sbjct: 491 KQEPVPIQMGCHGIGVSRMISAVSDILADEKGLNWPQAIAPFQVAVVPGKGLEKEAELVY 550

Query: 570 EIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE-ASERSIGI--RRFGS 626
           ++        +    D R +   +K+R+  +   P+I+  G    ++   + +  RR G+
Sbjct: 551 DVVTRNTQQPIDTILDDRKKDFAWKLRDADLIGYPVILAVGKNSWSAGNKVEVQCRRLGN 610

Query: 627 TTTQKVSLLDAIPILT 642
             T+ +SL +   +++
Sbjct: 611 LRTK-ISLEEVPELVS 625


>gi|83774018|dbj|BAE64143.1| unnamed protein product [Aspergillus oryzae]
          Length = 632

 Score = 96.0 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 39/198 (19%), Positives = 74/198 (37%), Gaps = 12/198 (6%)

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHL 304
           +  L R   L    +  SG+      G ++   L   + + ++     +++   +  Q L
Sbjct: 69  NDLLVRGGFLR---QAYSGIFHMLPLGLRVQDKLERLIDKHMRSVGASKVSLSSISSQEL 125

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
           W++SG      + +F      ++      F L P +      +     KSYR+LP+R+ +
Sbjct: 126 WERSGRLGE-GSEVFKFHDRKES-----RFLLAPTHEEEITTLVGSLAKSYRDLPLRVYQ 179

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLKIHNLIISIYKDFGFEKI 423
               YR+EP     GL+R R F   D + F CT E+       +      ++ D     +
Sbjct: 180 ISRKYRDEPRPR-QGLLRGREFIMKDLYTFDCTVEEALETYTSVKAAYTRLFNDLKIPYL 238

Query: 424 MVKLSTRPEKRVGSDALW 441
           +    +       S    
Sbjct: 239 VAAADSGNMGGNLSHEFH 256



 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 88/246 (35%), Gaps = 20/246 (8%)

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG- 472
            Y+        V++  RP      D      E+I   +LD    ++       V  G+  
Sbjct: 389 PYRVVDMYDSQVRVYKRPPLSDLLDQAGCKVEDIDYSMLDRFPGTNNGLSLVKVQDGDKC 448

Query: 473 ---AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF-NAFYVNSHSEKCHPVMIHRAVF 528
              A    K +  ++  +G  +  GT   +    S   +     S   +  P+ +     
Sbjct: 449 AKCAQGRVKTQVAVE--LGHTFHLGTRYSEVLQASVMVDQSSSGSSEHQVVPMQMGCHGI 506

Query: 529 GSIERFIGI---MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLK---SHHLSI 582
           G       +   + ++   N P  ++P + IV        E A++I + L    +  + +
Sbjct: 507 GVSRMITAVADSLADSKGLNWPRAVAPFEVIVVP-AKGLEEEAEKIYDTLTSDPASPVDV 565

Query: 583 ETDFRNETINYKIREHSIKKIPIIIICGD--KEASERSIGIRRFGSTTTQKVSLLD---A 637
             D R++ + +K+ +  +   PII++ G   K+     +  R+  +   + V L      
Sbjct: 566 ILDDRDKQMGWKLGDADLIGYPIIVVVGKGWKKEQTLEVQCRQLDNL-RENVPLEQLSTF 624

Query: 638 IPILTK 643
           I  L +
Sbjct: 625 IRSLLE 630


>gi|281342071|gb|EFB17655.1| hypothetical protein PANDA_008798 [Ailuropoda melanoleuca]
          Length = 282

 Score = 95.6 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 46/222 (20%), Positives = 90/222 (40%), Gaps = 20/222 (9%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPEDPRSLAV---IRHS 76
           +T  + A  +S    +K++   ++G+  D+  P+ +   IE +T +D     V      S
Sbjct: 61  STPYNCAMHLSEWYCRKSILALVDGQPWDMYKPLTKSCEIEFLTFKDRDPGEVNKAYWRS 120

Query: 77  CAHIMAEAVQSIWPEVQV------AIGPIIEDGFYYDFDKEQP-----FSSDELAQIEKK 125
           CA +M   ++  + +  V         P+I   F YD   ++       + + L  + K 
Sbjct: 121 CAMMMGCVIERAFKDEYVVSLVRAPEVPVICGAFCYDVVLDKRLDEWMPTKENLRSLTKD 180

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYK-VEILESIPAKENVTLYRQGEWFDLCR 184
              +I +D PF    +  + A E+F+  K     VE   S   +  V L+R G++ D+  
Sbjct: 181 AHSLIYKDLPFETLEVEAKVALEIFQRNKYKMDFVEEKASQNPERIVKLHRFGDFIDVSE 240

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWN 226
           GP +  T          +V+  +    +   ++ R  G +  
Sbjct: 241 GPVIPRTS----ICFQYEVSAVHNLQATQLSLVRRFQGLSLP 278


>gi|171688027|ref|XP_001908954.1| hypothetical protein [Podospora anserina S mat+]
 gi|170943975|emb|CAP69627.1| unnamed protein product [Podospora anserina S mat+]
          Length = 577

 Score = 95.6 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 38/180 (21%), Positives = 69/180 (38%), Gaps = 11/180 (6%)

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEE 293
                  +  H KL R   L       +G+      G ++   L   + R ++       
Sbjct: 18  KRPASGVENGHAKLIRAGFLR---PSHAGIFHMLPLGRRVQTKLEELVARHMEHMLAASR 74

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           ++   V  Q LW +SG  ++  + +F      +       + L P +     A+     K
Sbjct: 75  VSLSAVSSQSLWDKSGRLENTASELFKFSDRKNVG-----YLLAPTHEEEITALVAQTAK 129

Query: 354 SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           + ++LP+RL +    YR+E     HGL+R R F   D + F + ++   E      L+ S
Sbjct: 130 TAKDLPLRLFQITPKYRDEFRPR-HGLLRGREFVMKDLYTFDSSKESALETYDNVRLVYS 188



 Score = 58.3 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 24/157 (15%), Positives = 59/157 (37%), Gaps = 12/157 (7%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGI----MIENFKGNLPLWLSP 552
           +         A  +  + E+   V +    +G  I R +G     +++    N P+ ++P
Sbjct: 417 LGTRYSEALGATILVPNDERK-AVPMQMGCYGIGISRILGAVAELLMDEKGLNWPVAIAP 475

Query: 553 IQAIVTTITSSAVEYAQEIANLLKSHHL------SIETDFRNETINYKIREHSIKKIPII 606
              ++        + A E+   +            +  D R +T+ +K+ +  +   PII
Sbjct: 476 YSCVIVMGAGVDEQDAVEVYRQINQIGRVQAKYLDVVLDDRQKTLPWKLMDADLAGFPII 535

Query: 607 IICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  G +  + + + ++       Q V + +   I+ K
Sbjct: 536 VTLGREWLAAKRLEVQCRRLGVKQAVGITELPQIIAK 572


>gi|301769371|ref|XP_002920104.1| PREDICTED: 39S ribosomal protein L39, mitochondrial-like
           [Ailuropoda melanoleuca]
          Length = 335

 Score = 95.6 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 46/222 (20%), Positives = 90/222 (40%), Gaps = 20/222 (9%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPEDPRSLAV---IRHS 76
           +T  + A  +S    +K++   ++G+  D+  P+ +   IE +T +D     V      S
Sbjct: 83  STPYNCAMHLSEWYCRKSILALVDGQPWDMYKPLTKSCEIEFLTFKDRDPGEVNKAYWRS 142

Query: 77  CAHIMAEAVQSIWPEVQV------AIGPIIEDGFYYDFDKEQP-----FSSDELAQIEKK 125
           CA +M   ++  + +  V         P+I   F YD   ++       + + L  + K 
Sbjct: 143 CAMMMGCVIERAFKDEYVVSLVRAPEVPVICGAFCYDVVLDKRLDEWMPTKENLRSLTKD 202

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYK-VEILESIPAKENVTLYRQGEWFDLCR 184
              +I +D PF    +  + A E+F+  K     VE   S   +  V L+R G++ D+  
Sbjct: 203 AHSLIYKDLPFETLEVEAKVALEIFQRNKYKMDFVEEKASQNPERIVKLHRFGDFIDVSE 262

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWN 226
           GP +  T          +V+  +    +   ++ R  G +  
Sbjct: 263 GPVIPRTS----ICFQYEVSAVHNLQATQLSLVRRFQGLSLP 300


>gi|156089629|ref|XP_001612221.1| tRNA synthetase class II core domain containing protein [Babesia
           bovis]
 gi|154799475|gb|EDO08653.1| tRNA synthetase class II core domain containing protein [Babesia
           bovis]
          Length = 439

 Score = 95.6 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 49/356 (13%), Positives = 100/356 (28%), Gaps = 59/356 (16%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANM 318
               G+      G +I   +   +  ++     +E+  P +L       +   + +   +
Sbjct: 56  HMSPGISTVLPIGKRIVNRIERVIHVEMSRIGAKEVELPMLLSSDT--INERRNEFGREL 113

Query: 319 FAVKCADDTIKDLRTFALKPMNCPGHVAVF--NHGLKSYRELPVRLAEFGSVYRNEPSGS 376
           F++     T ++ + + L P        +        S R LP+ L + G  +R+E    
Sbjct: 114 FSL-----TDRNGKHYDLCPTCEELICRMLDKALSPLSKRNLPIYLYQIGRKFRDEARP- 167

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
            +  MR R F   DA+ F + +                                      
Sbjct: 168 CNSNMRCREFIMKDAYSFHSDKDSAAMDYNKFKQAYERIFTLLELSFDTVTIG------- 220

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
                 D E+  + +L   K   +                                    
Sbjct: 221 ------DTEHEFRAMLPNKKTLME-------------------------------IAHIF 243

Query: 497 QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN---FKGNLPLWLSPI 553
           Q+   + +     Y        HPV ++    G          ++       LP  ++P 
Sbjct: 244 QLGDAITTEAGLKYEG-EGRMKHPVYLNSYGIGIHRLLQAAASQHADSEGIRLPQIIAPY 302

Query: 554 QAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIIC 609
              V     ++ + + +I  LL    +    D R   IN ++ +     IP I+  
Sbjct: 303 DVAVIPCDENSEQASADIYTLLSKRGIDTFLDTRKAPINQRVSDMMNIGIPHIVYV 358


>gi|319777143|ref|YP_004136794.1| glycyl-tRNA synthetase [Mycoplasma fermentans M64]
 gi|318038218|gb|ADV34417.1| Glycyl-tRNA synthetase [Mycoplasma fermentans M64]
          Length = 453

 Score = 95.6 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 58/344 (16%), Positives = 105/344 (30%), Gaps = 53/344 (15%)

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR-ELPVRLAEFGSVYRNEP 373
           + N+        T +      L+P    G    F +  +S R +LP+ + + G  +RNE 
Sbjct: 146 KFNLMFETKQGVTEETKNKIYLRPETAQGIFVNFKNVQRSMRSKLPMGIGQVGKSFRNEV 205

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
           +   + + R R F Q +  VFC       E  K++   I   + F     + K + R  +
Sbjct: 206 TPG-NFIFRTREFEQMELEVFCHP----KEANKLYKYYIKKAEKFAEYLGLSKENVRIRE 260

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRI----NTGVLLGEGAFYGPKFEYILKDAIGR 489
               +     +       L          I    +  +     A  G   EY        
Sbjct: 261 HEKEELSHYSSGTSDIEYLFPFGWGELLGIANRTDYDLNAHMKA-TGENLEY-------- 311

Query: 490 DWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPL- 548
                   VD     +F  F +                 G     + I+I+++       
Sbjct: 312 --------VDPVTNEKFVPFVIE-------------PSIGLDRLMLAILIDSYDEEKLEK 350

Query: 549 -----------WLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
                       L+P Q  V  +     + A E+   L    LS+  D    +I  + R 
Sbjct: 351 DDSRVVLHLHKNLAPYQVAVLPLVKKLNDKATEVYEKLLKAGLSVTYDETG-SIGKRYRR 409

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
                 P  +        + ++ IR   S   + V + + +  L
Sbjct: 410 QDAIGTPYCVTIDFDSLEKNTVTIRDRDSMKQKTVLINNLLKEL 453


>gi|238810062|dbj|BAH69852.1| hypothetical protein [Mycoplasma fermentans PG18]
          Length = 466

 Score = 95.6 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 58/344 (16%), Positives = 105/344 (30%), Gaps = 53/344 (15%)

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR-ELPVRLAEFGSVYRNEP 373
           + N+        T +      L+P    G    F +  +S R +LP+ + + G  +RNE 
Sbjct: 159 KFNLMFETKQGVTEETKNKIYLRPETAQGIFVNFKNVQRSMRSKLPMGIGQVGKSFRNEV 218

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
           +   + + R R F Q +  VFC       E  K++   I   + F     + K + R  +
Sbjct: 219 TPG-NFIFRTREFEQMELEVFCHP----KEANKLYKYYIKKAEKFAEYLGLSKENVRIRE 273

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRI----NTGVLLGEGAFYGPKFEYILKDAIGR 489
               +     +       L          I    +  +     A  G   EY        
Sbjct: 274 HEKEELSHYSSGTSDIEYLFPFGWGELLGIANRTDYDLNAHMKA-TGENLEY-------- 324

Query: 490 DWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPL- 548
                   VD     +F  F +                 G     + I+I+++       
Sbjct: 325 --------VDPVTNEKFVPFVIE-------------PSIGLDRLMLAILIDSYDEEKLEK 363

Query: 549 -----------WLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
                       L+P Q  V  +     + A E+   L    LS+  D    +I  + R 
Sbjct: 364 DDSRVVLHLHKNLAPYQVAVLPLVKKLNDKATEVYEKLLKAGLSVTYDETG-SIGKRYRR 422

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
                 P  +        + ++ IR   S   + V + + +  L
Sbjct: 423 QDAIGTPYCVTIDFDSLEKNTVTIRDRDSMKQKTVLINNLLKEL 466


>gi|41615203|ref|NP_963701.1| glycyl-tRNA synthetase [Nanoarchaeum equitans Kin4-M]
 gi|40068927|gb|AAR39262.1| NEQ417 [Nanoarchaeum equitans Kin4-M]
          Length = 512

 Score = 95.6 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 61/341 (17%), Positives = 117/341 (34%), Gaps = 38/341 (11%)

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRE-LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
                L+P    G   +F      +R+ LP+ LA  G  +RNE S     L+R+R FTQ 
Sbjct: 177 ENEAYLRPETAQGPYVMFKREFILHRQKLPLGLAVVGKAFRNEISPR-QLLLRLREFTQA 235

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMK 449
           +  +F   E    +  ++ ++ ++     G  K +                +      +K
Sbjct: 236 ELQIFFDPEDNEFDINEVKDVELNFLDKEGNYKRIKVKDLPFP------EFYAYFVGKVK 289

Query: 450 GVLDTIKNSSQDRINTGVLLGEGAFYG---PKFEYILKDAIGRDWQCGTIQVDFNLPSRF 506
              + +    +      +   E AFY       E        ++      + D +L    
Sbjct: 290 QFYERLGIPEERLRFRELSEKEKAFYNKYHVDIEINFPTYGWKEVGGIHYRTDHDLSGHM 349

Query: 507 N----AFYVNSHSEKCHPVMIHRAVFGSIERFIG----IMIENFK--------------- 543
                   V   ++K  P ++  + FG     +      + E                  
Sbjct: 350 KVSGKDLTVQKDNKKFIPHVLELS-FGVDRNVLALIDLFLTEEEYEIERDNQKVKEKRVV 408

Query: 544 GNLPLWLSPIQAIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             +P  L+PI+  V  +      +E A+E+ N+LK++   I  D +  +I  + R     
Sbjct: 409 LKIPKHLAPIKVAVFPLLKKPELIEKAKEVYNMLKNYFYPIIYDEQG-SIGRRYRRVDEI 467

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +P  I    +   + ++ IR   +    +V + D    LT
Sbjct: 468 GVPYAITIDYQTLEDNTVTIRDRDTMKQVRVKIEDLPNQLT 508


>gi|70950383|ref|XP_744519.1| hypothetical protein [Plasmodium chabaudi chabaudi]
 gi|56524507|emb|CAH79733.1| hypothetical protein PC000457.03.0 [Plasmodium chabaudi chabaudi]
          Length = 333

 Score = 95.6 bits (236), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 44/217 (20%), Positives = 83/217 (38%), Gaps = 24/217 (11%)

Query: 442 DDAENIMKGVLDTIKNSSQDRINTGVLLG--------EGAFYGPKFEYILKDAIGRDWQC 493
           ++A  ++  +LD  +   ++ +   V+ G         GA +    E  + ++ GR  Q 
Sbjct: 5   EEAVKMVFDILDIYRRWYEECLAVPVIKGIKSEGEKFGGANFTSTNETFISES-GRAIQA 63

Query: 494 GTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
            T      N    F   + +    K +   +H+  +G   R IG+MI     N  L L P
Sbjct: 64  ATSHYLGTNFAKMFKIEFEDEQENKQY---VHQTSWGCTTRSIGVMIMVHSDNKGLILPP 120

Query: 553 ----IQAIVTTITSSAVE------YAQEIANLLKSHHLSIETDFRN-ETINYKIREHSIK 601
                +A++  I     +      Y ++I  +LK+  ++   D R+  +  YK     ++
Sbjct: 121 NVAKYKAVIVPILYKNTDETAIFNYCKDIEKILKNAQINCIFDDRDLYSPGYKFNHWELR 180

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
            IPI I  G K+    S    R  +     +     +
Sbjct: 181 GIPIRIEVGPKDIQNNSCVFVRRDNNQKFNIKKESVL 217


>gi|307109063|gb|EFN57302.1| hypothetical protein CHLNCDRAFT_34933 [Chlorella variabilis]
          Length = 290

 Score = 95.6 bits (236), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 38/180 (21%), Positives = 77/180 (42%), Gaps = 5/180 (2%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ-VLDQHLWQQSGHWDSYRAN 317
            D SG        + I+  + ++   +IK+   +    P  + +  L  +  H + +   
Sbjct: 81  YDVSGCYILRPYSFAIWDEIKNWFDARIKELGVQNAYFPLFITEDVLMTEKEHVEGFAPE 140

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           +  V     + +  R  A++P +       +   ++S+R+LP+RL ++ +V R E     
Sbjct: 141 VAWVT-RSGSSELERPIAIRPTSETVMYPYYAQWIRSHRDLPLRLNQWTNVVRWEFKHPT 199

Query: 378 HGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
              +R R F   + H  F TKE+   E  +I +L   +Y++     +M  + +  EK  G
Sbjct: 200 -PFIRSREFLWQEGHTCFATKEEADTEVYQILDLYRRVYEELLAVPVMKGVKSSKEKFAG 258


>gi|110801216|ref|YP_695997.1| putative threonyl-tRNA synthetase/uridine kinase [Clostridium
           perfringens ATCC 13124]
 gi|168212082|ref|ZP_02637707.1| putative threonyl-tRNA synthetase/uridine kinase [Clostridium
           perfringens B str. ATCC 3626]
 gi|110675863|gb|ABG84850.1| phosphoribulokinase/uridine kinase family protein [Clostridium
           perfringens ATCC 13124]
 gi|170710004|gb|EDT22186.1| putative threonyl-tRNA synthetase/uridine kinase [Clostridium
           perfringens B str. ATCC 3626]
          Length = 551

 Score = 95.6 bits (236), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 44/172 (25%), Positives = 81/172 (47%), Gaps = 2/172 (1%)

Query: 45  GKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG 103
            K  + +D +  +G IE+I   DP        +   +  +A   ++ + ++ I   I  G
Sbjct: 43  NKYYEFTDLINNDGDIELINISDPHGKIAYSRTLQFVFIKATLDLFKDARINIEHSISKG 102

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE 163
            + +  KE+    +++ +I+KKMQEII ++    K  +  ++A  +F+S K   KV++L 
Sbjct: 103 TFGEIHKEKALDEEDILKIKKKMQEIINKNIIIEKIKMPKKEAIYIFKSYKMQDKVDLLH 162

Query: 164 SIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRP 215
            +   E V LY+  + +D   G    STG +K F  L    G      S++ 
Sbjct: 163 WVQE-EYVNLYKLEDRYDYFYGDMAYSTGVLKYFDLLYYNPGFILMVPSHKE 213


>gi|119630385|gb|EAX09980.1| mitochondrial ribosomal protein L39, isoform CRA_b [Homo sapiens]
          Length = 328

 Score = 95.2 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 40/219 (18%), Positives = 87/219 (39%), Gaps = 24/219 (10%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPEDPRSLAV---IRHS 76
           +T    A  +S    +K++   ++G+  D+  P+ +   I+ +T +D     V      S
Sbjct: 86  STPYSCAMHLSEWYCRKSILALVDGQPWDMYKPLTKSCEIKFLTFKDCDPGEVNKAYWRS 145

Query: 77  CAHIMAEAVQSIWPEVQV------AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEII 130
           CA +M   ++  + +  +         P+++         E   + + L    K    +I
Sbjct: 146 CAMMMGCVIERAFKDEYMVNLVRAPEVPVLDSKL-----DEWMPTKENLRSFTKDAHALI 200

Query: 131 ARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN---VTLYRQGEWFDLCRGPH 187
            +D PF    +  + A E+   +   YKV+ +E   ++     V L+R G++ D+  GP 
Sbjct: 201 YKDLPFETLEVEAKVALEI--FQHSKYKVDFIEEKASQNPERIVKLHRIGDFIDVSEGPL 258

Query: 188 VRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWN 226
           +  T          +V+  +    +   ++ R  G +  
Sbjct: 259 IPRTS----ICFQYEVSAVHNLQPTQPSLIRRFQGVSLP 293


>gi|326474290|gb|EGD98299.1| prolyl-tRNA synthetase [Trichophyton tonsurans CBS 112818]
          Length = 631

 Score = 95.2 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 38/165 (23%), Positives = 64/165 (38%), Gaps = 10/165 (6%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQH 303
             +  L R   L       SGV      G ++ + L   + + ++       +   L   
Sbjct: 60  DSNDLLIRAGFLRQPY---SGVFHLLPLGLRVQEKLERLIDKHMRKLSAAKLSLSSLSSQ 116

Query: 304 L-WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             W++SG      + +F       T      F L P +     +V +  +KSYR+LP+R+
Sbjct: 117 ALWKKSGRLHDDDSEVFRFVDRKKTP-----FLLAPTHEEEITSVVSGLIKSYRDLPLRV 171

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
            +    YR+EP    HGL+R R F   D + F + E    +    
Sbjct: 172 YQISRKYRDEPRPR-HGLLRGREFVMKDLYTFDSTEAEAIKTYNT 215



 Score = 54.4 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 30/131 (22%), Positives = 48/131 (36%), Gaps = 11/131 (8%)

Query: 517 KCHPVMIHRAVFGS-IERFIG----IMIENFKGNLPLWLSPIQAIVTTIT--SSAVEYAQ 569
           K   V I     G  + R I     I+ +    N P  ++P Q +V          E   
Sbjct: 491 KQELVPIQMGCHGIGVSRMISAVSDILADEKGLNWPQAIAPFQVVVVPGKGLEKEGELVY 550

Query: 570 EIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE-ASERSIGI--RRFGS 626
           +I        +    D R +   +K+R+      PII+  G     +   + +  RR G+
Sbjct: 551 DIVTQNTQQLIDTILDDRKKDFAWKLRDADTIGYPIILAVGKNSWGAGNKVEVQCRRLGN 610

Query: 627 TTTQKVSLLDA 637
             TQ VSL + 
Sbjct: 611 LRTQ-VSLEEV 620


>gi|326479249|gb|EGE03259.1| prolyl-tRNA synthetase [Trichophyton equinum CBS 127.97]
          Length = 631

 Score = 95.2 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 38/165 (23%), Positives = 64/165 (38%), Gaps = 10/165 (6%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQH 303
             +  L R   L       SGV      G ++ + L   + + ++       +   L   
Sbjct: 60  DSNDLLIRAGFLRQPY---SGVFHLLPLGLRVQEKLERLIDKHMRKLSAAKLSLSSLSSQ 116

Query: 304 L-WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             W++SG      + +F       T      F L P +     +V +  +KSYR+LP+R+
Sbjct: 117 ALWKKSGRLHDDDSEVFRFVDRKKTP-----FLLAPTHEEEITSVVSGLIKSYRDLPLRV 171

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
            +    YR+EP    HGL+R R F   D + F + E    +    
Sbjct: 172 YQISRKYRDEPRPR-HGLLRGREFVMKDLYTFDSTEAEAIKTYNT 215



 Score = 58.3 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/131 (23%), Positives = 49/131 (37%), Gaps = 11/131 (8%)

Query: 517 KCHPVMIHRAVFGS-IERFIG----IMIENFKGNLPLWLSPIQAIVTTIT--SSAVEYAQ 569
           K  PV I     G  + R I     I+ +    N P  ++P Q +V          E   
Sbjct: 491 KQEPVPIQMGCHGIGVSRMISAVSDILADEKGLNWPQAIAPFQVVVVPGKGLEKEGELVY 550

Query: 570 EIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE-ASERSIGI--RRFGS 626
           +I        +    D R +   +K+R+      PII+  G     +   + +  RR G+
Sbjct: 551 DIVTQNTQQLIDTILDDRKKDFAWKLRDADTIGYPIILAVGKNSWGAGNKVEVQCRRLGN 610

Query: 627 TTTQKVSLLDA 637
             TQ VSL + 
Sbjct: 611 LRTQ-VSLEEV 620


>gi|151944803|gb|EDN63062.1| conserved protein [Saccharomyces cerevisiae YJM789]
 gi|190405650|gb|EDV08917.1| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a]
 gi|259146006|emb|CAY79266.1| EC1118_1E8_2102p [Saccharomyces cerevisiae EC1118]
          Length = 576

 Score = 95.2 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 74/188 (39%), Gaps = 12/188 (6%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSY 314
            +     G+  W   G +    + + +R ++       E++   +  + LWQ +  W++ 
Sbjct: 38  FVRRSQVGLFQWLPLGLRSLNKVSNAIRNRMDSDGGAIEVSLSAISSKALWQATDRWNN- 96

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
            + +F +K +       + + L          +  + + SY+++P+ + +    YR+E  
Sbjct: 97  -SELFKLKDSK-----GKQYCLTATCEEDITDLMKNYIASYKDMPITIYQMTRKYRDEIR 150

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
               G++R R F   DA+ F + E+      +   L  +  K F   KI    +      
Sbjct: 151 PR-GGILRGREFLMKDAYSFASNEEDAFASFQ--KLDDTYNKIFKDLKIPFVSAWADSGD 207

Query: 435 VGSDALWD 442
           +G +   +
Sbjct: 208 IGGEFSKE 215



 Score = 42.1 bits (97), Expect = 0.32,   Method: Composition-based stats.
 Identities = 26/152 (17%), Positives = 50/152 (32%), Gaps = 20/152 (13%)

Query: 480 EYILKDAIGRDWQCGTIQVDF------NLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           E   K   GR     +I+V              N  +V+  ++    V +     G   R
Sbjct: 363 EICGKCEEGRLEPLKSIEVGHIFLLGNKYSKPLNVKFVDKENKNETFVHMGCYGIGVS-R 421

Query: 534 FIGIMIE----NFKGNLPLWLSPIQAIVT--TITSSAVEYAQEIANLLKSHHLS-----I 582
            +G + E    +     P  ++P +  +          +  Q++ + L +          
Sbjct: 422 LVGAIAELGRDSNGFRWPAIMAPYKVSICTGPNNPENSQRLQDVKSKLLNDPTMQNLQND 481

Query: 583 ETDFRNETIN--YKIREHSIKKIPIIIICGDK 612
             D  NE +    +I+      IP+ +I G K
Sbjct: 482 ILDQFNEKLGIGARIKLSHAMGIPLCVIVGSK 513


>gi|6320931|ref|NP_011010.1| Aim10p [Saccharomyces cerevisiae S288c]
 gi|731489|sp|P39965|SYPM_YEAST RecName: Full=Probable prolyl-tRNA synthetase, mitochondrial;
           AltName: Full=Altered inheritance rate of mitochondria
           protein 10; AltName: Full=Proline--tRNA ligase;
           Short=ProRS
 gi|603325|gb|AAB64642.1| Yer087wp [Saccharomyces cerevisiae]
 gi|285811719|tpg|DAA07747.1| TPA: Aim10p [Saccharomyces cerevisiae S288c]
          Length = 576

 Score = 95.2 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 74/188 (39%), Gaps = 12/188 (6%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSY 314
            +     G+  W   G +    + + +R ++       E++   +  + LWQ +  W++ 
Sbjct: 38  FVRRSQVGLFQWLPLGLRSLNKVSNAIRNRMDSDGGAIEVSLSAISSKALWQATDRWNN- 96

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
            + +F +K +       + + L          +  + + SY+++P+ + +    YR+E  
Sbjct: 97  -SELFKLKDSK-----GKQYCLTATCEEDITDLMKNYIASYKDMPITIYQMTRKYRDEIR 150

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
               G++R R F   DA+ F + E+      +   L  +  K F   KI    +      
Sbjct: 151 PR-GGILRGREFLMKDAYSFASNEEDAFASFQ--KLDDTYNKIFKDLKIPFVSAWADSGD 207

Query: 435 VGSDALWD 442
           +G +   +
Sbjct: 208 IGGEFSKE 215



 Score = 41.7 bits (96), Expect = 0.39,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 56/171 (32%), Gaps = 22/171 (12%)

Query: 480 EYILKDAIGRDWQCGTIQVDF------NLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           E   K   GR     +I+V              N  +V+  ++    V +     G   R
Sbjct: 363 EICGKCEEGRLEPLKSIEVGHIFLLGNKYSKPLNVKFVDKENKNETFVHMGCYGIGVS-R 421

Query: 534 FIGIMIE----NFKGNLPLWLSPIQAIVT--TITSSAVEYAQEIANLLKSHHLS-----I 582
            +G + E    +     P  ++P +  +          +  Q++ + L +          
Sbjct: 422 LVGAIAELGRDSNGFRWPAIMAPYKVSICTGPNNPENSQRLQDVKSELLNDPTMQNLQND 481

Query: 583 ETDFRNETIN--YKIREHSIKKIPIIIICGDKEASERSIGIR--RFGSTTT 629
             D  NE +    +I+      IP+ +I G K      I +R  R+G    
Sbjct: 482 ILDQFNEKLGIGARIKLSHAMGIPLCVIVGSKSWPNVEIEVRGIRWGEKDL 532


>gi|256271449|gb|EEU06503.1| YER087W-like protein [Saccharomyces cerevisiae JAY291]
          Length = 576

 Score = 95.2 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 74/188 (39%), Gaps = 12/188 (6%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSY 314
            +     G+  W   G +    + + +R ++       E++   +  + LWQ +  W++ 
Sbjct: 38  FVRRSQVGLFQWLPLGLRSLNKVSNAIRNRMDSDGGAIEVSLSAISSKALWQATDRWNN- 96

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
            + +F +K +       + + L          +  + + SY+++P+ + +    YR+E  
Sbjct: 97  -SELFKLKDSK-----GKQYCLTATCEEDITDLMKNYIASYKDMPITIYQMTRKYRDEIR 150

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
               G++R R F   DA+ F + E+      +   L  +  K F   KI    +      
Sbjct: 151 PR-GGILRGREFLMKDAYSFASNEEDAFASFQ--KLDDTYNKIFKDLKIPFVSAWADSGD 207

Query: 435 VGSDALWD 442
           +G +   +
Sbjct: 208 IGGEFSKE 215



 Score = 41.7 bits (96), Expect = 0.40,   Method: Composition-based stats.
 Identities = 26/152 (17%), Positives = 50/152 (32%), Gaps = 20/152 (13%)

Query: 480 EYILKDAIGRDWQCGTIQVDF------NLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           E   K   GR     +I+V              N  +V+  ++    V +     G   R
Sbjct: 363 EICGKCEEGRLEPLKSIEVGHIFLLGNKYSKPLNVKFVDKENKNETFVHMGCYGIGVS-R 421

Query: 534 FIGIMIE----NFKGNLPLWLSPIQAIVT--TITSSAVEYAQEIANLLKSHHLS-----I 582
            +G + E    +     P  ++P +  +          +  Q++ + L +          
Sbjct: 422 LVGAIAELGRDSNGFRWPAIMAPYKVSICTGPNNPENSQRLQDVKSKLLNDPTMQNLQND 481

Query: 583 ETDFRNETIN--YKIREHSIKKIPIIIICGDK 612
             D  NE +    +I+      IP+ +I G K
Sbjct: 482 ILDQFNEKLGIGARIKLSHAMGIPLCVIIGSK 513


>gi|197294659|ref|YP_001799200.1| glycyl-tRNA synthetase [Candidatus Phytoplasma australiense]
 gi|171853986|emb|CAM11949.1| Glycyl-tRNA synthetase, class II [Candidatus Phytoplasma
           australiense]
          Length = 452

 Score = 95.2 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 50/335 (14%), Positives = 114/335 (34%), Gaps = 46/335 (13%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            NM         ++  +   L+P    G    F + LK+  +++P  + + G V+RNE +
Sbjct: 140 FNMLFQTHQGVVLEKSKPLYLRPETAQGIFIQFKNILKTTRKKIPFGVCQVGKVFRNEIT 199

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              + + R   F Q +   FC             N +       G +K  +      ++ 
Sbjct: 200 PG-NFIFRSCEFEQMELEFFCEPNTQNEWFEYWKNFMYQFLITLGMKKENLSFKNHQKEE 258

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           +      +   +I+       K         G+          + ++ LK+         
Sbjct: 259 L--SHYSEKTTDIL------FKFPWGMDELWGIAS--------RTDFDLKN--------- 293

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN--------- 545
                    S+ +  Y + +++K +   +     G    F+ ++I N+  +         
Sbjct: 294 -----HQNHSKKDLTYFDPNTQKRYFPYVIEPSLGVERLFLALLINNYHEDSVNQTPRQV 348

Query: 546 --LPLWLSPIQAIVTT-ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
                +L+P +  V   I       A+EI N L  + L +  D   ++I  + R   +  
Sbjct: 349 LTFHPFLAPYKVAVLPLIKKEHASKAKEIENYLMKY-LDVCYDDT-QSIGKRYRRQDMIG 406

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
            P  +    +   + ++ +R   +   + ++L + 
Sbjct: 407 TPFCLTVDHETLEKNTVTLRNRDTLKQETMTLEEV 441


>gi|320335266|ref|YP_004171977.1| prolyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
 gi|319756555|gb|ADV68312.1| prolyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
          Length = 504

 Score = 95.2 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 37/169 (21%), Positives = 64/169 (37%), Gaps = 8/169 (4%)

Query: 269 HRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
                ++   L + +  +++    +E+  P +    LW  SG WD+YRA       AD  
Sbjct: 43  LPLMSRVEARLEALVHAEMRAVGAQEVRLPMLQPAALWAASGRWDAYRAEGLMFSLAD-- 100

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
            +  R   L P +    VA    GL+   +LP  + + G  +R+E      GL+R R FT
Sbjct: 101 -RAGRALTLAPTHEEA-VAFLARGLRREADLPKVVYQVGRKFRDELRPR-GGLLRAREFT 157

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
             DA+     E       +  +   +     G   +  +        +G
Sbjct: 158 MKDAYSVHADEVSLAGTFEAMSGAYARL--LGALGVPWRAVEADSGSIG 204



 Score = 77.1 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 22/156 (14%), Positives = 57/156 (36%), Gaps = 6/156 (3%)

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS--IERFIGIMIENFKGNLPLWL 550
               Q+         A +V +      P+M    +  S   +    +  + +  N P  +
Sbjct: 348 GHAFQLGARYTEALGARFVGADGSSRAPLMGCYGIGVSRLAQAVAEVTCDGWGLNWPAVI 407

Query: 551 SPIQAIVTTITSS---AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIII 607
           +P   +VT   S+     E  + +   L +  +    D R E    K+R+  +  +P+ +
Sbjct: 408 APFGVVVTVTNSADAAQREAGERVYGALVAAGVDALLDDRAERAGVKLRDAEMIGVPLRV 467

Query: 608 ICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             G ++ +  ++ +    S + +   +   +  + +
Sbjct: 468 TVG-RDLAAGNVELFTRRSRSCEVFHVDAVVGAVQR 502


>gi|303233759|ref|ZP_07320413.1| glycine--tRNA ligase [Finegoldia magna BVS033A4]
 gi|302495193|gb|EFL54945.1| glycine--tRNA ligase [Finegoldia magna BVS033A4]
          Length = 465

 Score = 94.8 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 54/336 (16%), Positives = 110/336 (32%), Gaps = 32/336 (9%)

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEP 373
           + N+        T  +     L+P    G    F +  + S +++P  + + G  +RNE 
Sbjct: 153 KFNLMFKTFQGVTEDNKSEIYLRPETAQGIFVNFKNVQRTSRKKVPFGIGQIGKSFRNEI 212

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
           +   + + R R F Q +   FC             N       + G  +  ++L    ++
Sbjct: 213 TPG-NFIFRTREFEQMELEFFCKPGTDLEWFDYWRNFCKEFLLNLGIREENLRLRDHSQE 271

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL-----LGEGAFYGPKFEYILKDAIG 488
            +   + +  A       L          I            EG+  G K EY+     G
Sbjct: 272 EL---SFYSKATTDF-EYLFPFGWGELWGIADRTDYDLSKHSEGS--GEKLEYMDPTTNG 325

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPL 548
           +      I+    +   F +F  +++ E+       R V                  +  
Sbjct: 326 KYIPYC-IEPSVGVDRMFLSFLCDAYDEEQLEDNTTRTVL----------------KIHP 368

Query: 549 WLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIII 608
            L+  +  V  +T    + A EI N L + +     D    +I  + R       P  + 
Sbjct: 369 ALAAYKVAVLPLTKKLNDKAMEIYNEL-AKNFMTHFDDAG-SIGKRYRREDEAGTPYCVT 426

Query: 609 CGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
                  + ++ IR   +   +++++ + I  + KE
Sbjct: 427 IDFDTLEDNTVTIRDRDTMEQKRMTVEEIIEFVNKE 462


>gi|266626064|ref|ZP_06118999.1| conserved hypothetical protein [Clostridium hathewayi DSM 13479]
 gi|288862027|gb|EFC94325.1| conserved hypothetical protein [Clostridium hathewayi DSM 13479]
          Length = 150

 Score = 94.8 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 59/141 (41%), Gaps = 4/141 (2%)

Query: 14  IKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAV 72
            K +P   T  ++AE          + V INGK+ +L   V+ +  +E  T  D   +  
Sbjct: 10  TKEYPNGTTYLEIAEEYQPQYEDDILLVRINGKLRELHKKVKFDCRLEFYTGRDQPGIQT 69

Query: 73  IRHSCAHIMAEAVQSIWP---EVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
              S   +M +A   +       +V +   +  G+Y +       + + + +++ +M E 
Sbjct: 70  YHRSATFLMLKAFYDVVGVEKIEKVTVDFSLGKGYYIEPHGSFTLTEELIGRVKARMHEY 129

Query: 130 IARDSPFLKQYLSHEKARELF 150
           +    P +K+  + + A ELF
Sbjct: 130 VEEKIPIMKRSENTDDAIELF 150


>gi|296084982|emb|CBI28397.3| unnamed protein product [Vitis vinifera]
          Length = 149

 Score = 94.5 bits (233), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 53/135 (39%), Positives = 82/135 (60%), Gaps = 7/135 (5%)

Query: 216 MLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED-GSGVIFWHRKGWK 274
           ML RIYGTAW  +++L  YL+F EE+++RDHR+L  ++DLF I ++ G G++FWH KG  
Sbjct: 1   MLQRIYGTAWENEEQLKAYLHFKEEAKRRDHRRLGIDLDLFSIQDEAGGGLVFWHPKGAI 60

Query: 275 IFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           +   +    ++  I+  Y+ + TP V    LW+ SGH D YR NM++    +D +     
Sbjct: 61  VRHIIEDSWKKIHIEHGYDLLYTPHVARADLWKTSGHLDFYRENMYSQITIEDEL----- 115

Query: 334 FALKPMNCPGHVAVF 348
           + L+PMN   H+  F
Sbjct: 116 YQLRPMNWEMHLCFF 130


>gi|255940600|ref|XP_002561069.1| Pc16g07440 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211585692|emb|CAP93414.1| Pc16g07440 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 630

 Score = 94.5 bits (233), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 41/187 (21%), Positives = 73/187 (39%), Gaps = 14/187 (7%)

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQV 299
            ++  +  L R   L    +  SGV      G ++   L   + + +      +++   +
Sbjct: 54  EKEDANDLLVRAGFLR---QAYSGVFHLLPLGLRVQDKLEHLIDKHMSSLGASKVSLSSI 110

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             Q LW+QSG      + +F       T      F L P +      +  H   SY+ LP
Sbjct: 111 SSQELWKQSGRLTD-GSELFRFNDRKGTP-----FLLAPTHEEEITTLVGHLTTSYKSLP 164

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+ +    YR+E      GL+R R F   D + F   +   +E LK ++ + S Y +  
Sbjct: 165 LRVYQISRKYRDEARPR-QGLLRGREFIMKDLYTF---DYSVDEALKTYDAVKSAYTELF 220

Query: 420 FEKIMVK 426
            E  +  
Sbjct: 221 NELKIPY 227



 Score = 57.9 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 25/129 (19%), Positives = 53/129 (41%), Gaps = 13/129 (10%)

Query: 517 KCHPVMIHRAVFGS-IERFIGI----MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
           K   V +     G  + R I      + ++   N P  ++P + +V +        A ++
Sbjct: 492 KEQIVPMQMGCHGIGVSRMISAVANRLADSKGLNWPRAMAPYEVVVVS-GKGLETVADQV 550

Query: 572 ANLLK---SHHLSIETDFRNETINYKIREHSIKKIPIIIICGD--KEASERSIGIRRFGS 626
            + L    +  L +  D R++ + +K+ +  +   PII++ G+  K+     +  RR   
Sbjct: 551 YDSLTGGAAASLDVILDDRDKGMGWKLGDADLIGYPIIVVVGNGWKKKETLEVQCRRLD- 609

Query: 627 TTTQKVSLL 635
              + VSL 
Sbjct: 610 -VKEDVSLD 617


>gi|300123658|emb|CBK24930.2| unnamed protein product [Blastocystis hominis]
          Length = 457

 Score = 94.5 bits (233), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 64/387 (16%), Positives = 136/387 (35%), Gaps = 53/387 (13%)

Query: 265 VIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKC 323
           +  +   G ++   +   + R ++    +++  P V + + W +SG  D     ++ +K 
Sbjct: 1   MYSFLPLGQRVLDEVEKIIDRNLETIGAQKMQMPIVQNLNRWMKSGRRDQIGKELYTLKD 60

Query: 324 ADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRV 383
                +  +   L P N      +    + +    P+ L +    +R+E      G++R 
Sbjct: 61  -----RKGQELCLSPTNEEVITELVKDLVATPSNYPLMLYQTSPKFRDEMR-LKAGVLRS 114

Query: 384 RGFTQDDAHVFCT----KEQMFNECLKIHNLIISIYK--------DFGFEKIMVKLSTRP 431
           + F   D + F T      + F++     + I    +        D G          + 
Sbjct: 115 KEFLMMDLYSFDTNLKKANETFDQVDTCFSNIFRELEIPVEALEADNGIMGGSRSKEYQC 174

Query: 432 EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDW 491
              VG D +   ++   K +      +S   I T +      F+   F  +L        
Sbjct: 175 CCGVGEDRVTRCSKCGYKSL-----YTSSTSIPTVIDY----FFSETFNQLL------FQ 219

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK-GNLPLWL 550
           Q   +   F L  R++  +   +  +  P+ +     G   R +G + E F   +  L+ 
Sbjct: 220 QSLELGHSFVLGDRYSTLFNLQN--RGSPLQMGCYGLGVS-RIVGSLFELFGHSSGILFP 276

Query: 551 SPI---QAIVTTIT--------SSAVEYAQ-EIANLLKSHHL--SIETDFRNE-TINYKI 595
            PI     +V            S   E A+ + A LL +      I  D R+E +   ++
Sbjct: 277 DPITTFDVVVLNTGTPIDRVFESEKTEAARAKTAELLDALGDALRICFDDRDELSAGNRL 336

Query: 596 REHSIKKIPIIIICGDKEASERSIGIR 622
            +  +    + +I G + A   ++ +R
Sbjct: 337 MDAELMGARVAVIAGKEFAMGGNLEVR 363


>gi|146304364|ref|YP_001191680.1| Ser-tRNA(Thr) hydrolase [Metallosphaera sedula DSM 5348]
 gi|145702614|gb|ABP95756.1| Ser-tRNA(Thr) hydrolase [Metallosphaera sedula DSM 5348]
          Length = 386

 Score = 94.5 bits (233), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 50/106 (47%), Gaps = 3/106 (2%)

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E     LPLWLSPI   +  +     +  ++ A  LK   + ++ D   E +  KIR   
Sbjct: 262 EKQTPTLPLWLSPIHVRILKVRKE--DNVEDFAKSLKERGIRVQVDDLEEGLGNKIRRAG 319

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           +  IP + I G++E    ++ +R   ++  + +++ + I  + K +
Sbjct: 320 MDWIPFVAIAGERELKTGNLTVRVRETSEQKPMTVDE-IERVVKSA 364


>gi|290994605|ref|XP_002679922.1| uridine kinase family protein [Naegleria gruberi]
 gi|284093541|gb|EFC47178.1| uridine kinase family protein [Naegleria gruberi]
          Length = 584

 Score = 94.5 bits (233), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 50/272 (18%), Positives = 110/272 (40%), Gaps = 11/272 (4%)

Query: 6   KLTFPDGSIKNFPVHATGSDVAESISRSL--AKKAVAVAINGKVCDLSDPVR--EGSIEI 61
           ++ FPD SI  FP      D+A  + + +       A+ IN  +  L++ +   +  +  
Sbjct: 32  EVEFPDKSIHVFPCPVKCFDIAVLLKKHMHIKTDIYALEINNLITSLNEVISFAQVKVAP 91

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           +  +     A++R S   ++  A    +PE+ +++   +  G+    D +   +++++++
Sbjct: 92  VLKDSVEGHAILRRSLVFLVGLATHLEFPELSLSVEHSLRSGYMICVDGKDELTNEQVSK 151

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFES-KKEAYKVEILESIPAKENVTLYRQG--- 177
           ++ +M+ ++++D P L +Y+S+E A + F++  K  Y   ++ +         Y  G   
Sbjct: 152 VQHRMELLVSKDLPILTRYVSYEMAMDFFQNVVKRPYTASLISANNDPAVPIDYCDGVDQ 211

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPM---LSRIYGTAWNTQQELTQY 234
           ++FDL     V  T  +K  F L K    +     N P    L     T  N   E   +
Sbjct: 212 QYFDLHHRTLVARTSFMKSTFTLEKFKQGFKLSFPNEPYDFGLEFNDETLSNVYSEYNNW 271

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGSGVI 266
                     D  +   +  +         + 
Sbjct: 272 GRITNTRCVGDLNQHVNDNTIKWFMALNHALH 303


>gi|39939112|ref|NP_950878.1| glycyl-tRNA synthetase [Onion yellows phytoplasma OY-M]
 gi|39722221|dbj|BAD04711.1| glycyl-tRNA synthetase, class II [Onion yellows phytoplasma OY-M]
          Length = 452

 Score = 94.1 bits (232), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 54/358 (15%), Positives = 109/358 (30%), Gaps = 46/358 (12%)

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRE 357
           ++   +   S        NM         +++ +   L+P    G    F + LK+  ++
Sbjct: 123 LVKNQVLGTSNWTPIRPFNMLFKTHQGVILENSKPLYLRPETAQGIFIQFKNILKTTRKK 182

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP  + + G V+RNE +   + + R   F Q +   FC      +      NL+      
Sbjct: 183 LPFGVCQIGKVFRNEVTPG-NFIFRTCEFEQMELEFFCQPGTEAHWFKHWKNLMYDFLIT 241

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
            G     +      +                  +L   K         G+          
Sbjct: 242 LGMNPQNLTFKDHKK------ENLSHYSQQTCDIL--FKFPWGFDELWGIASR------T 287

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
            F+                       S+ +  Y +  +++     +     G    F   
Sbjct: 288 NFDLK----------------THQQHSKKDLTYFDETTKQKILPYVIEPSLGIERLFFAF 331

Query: 538 MIENFKGN-----------LPLWLSPIQAIVTT-ITSSAVEYAQEIANLLKSHHLSIETD 585
           +I N+                 +L+P +  V   I  +    AQEI   L + H  +  D
Sbjct: 332 LINNYHEESTSNETRQILTFHPFLAPYKVAVLPLIKKTHSAKAQEIHQYL-AKHFDVCYD 390

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              ++I  + R   +   P  +   D+  +  ++ +R   +T  Q   L +A   + +
Sbjct: 391 ET-QSIGKRYRRQDMIGTPFCLTVDDQTLTHNTVTLRNRDTTQQQTFLLAEAKKYIQE 447


>gi|144227446|gb|AAZ44148.2| glycyl-tRNA synthetase [Mycoplasma hyopneumoniae J]
          Length = 455

 Score = 94.1 bits (232), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 63/338 (18%), Positives = 114/338 (33%), Gaps = 37/338 (10%)

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEP 373
           + N+           +     L+P    G    F + L++    LP+ +A+ G  +RNE 
Sbjct: 144 KFNLLFPTYQGIIEDEKTLLYLRPETAQGIFINFKNLLRTTKNSLPLIIAQVGKSFRNEI 203

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE- 432
           S   + + R R F Q +  +F   +Q  N        I +  K  GF K  ++L+   + 
Sbjct: 204 SPG-NFIFRTREFVQLELEIFLKPDQSENFFQNEIEKIKNFLKKLGFAKNSIRLNYHKKE 262

Query: 433 ---KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGR 489
                  + A ++   N   G L  I N     +       E +  G K E+ +  A G+
Sbjct: 263 KLAHYAKATADFEYNFNFGWGELIGISNRGDYDLK---NHSEKS--GEKLEF-VDSATGK 316

Query: 490 DWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI--MIENFKGNLP 547
            +    I+    L                      R +   +E       +   +   LP
Sbjct: 317 KFLPHIIEPSMGLD---------------------RLMLAVLEECFCFDSVKNRYFLKLP 355

Query: 548 LWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIII 607
             LSP +  V  +       A++I N L S  +S        +I  +     +      I
Sbjct: 356 FILSPYKVAVLPLLKKFNFLAEKIWNELISQKISATLVTSG-SIGKRYYHQDVIGTYFCI 414

Query: 608 ICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
               K      + +R   +T  + + + + I    KE+
Sbjct: 415 TIDQKSVENSIVTLRFRDTTEQKTLKIDE-ITKFIKEN 451


>gi|315641198|ref|ZP_07896275.1| proline--tRNA ligase [Enterococcus italicus DSM 15952]
 gi|315482965|gb|EFU73484.1| proline--tRNA ligase [Enterococcus italicus DSM 15952]
          Length = 556

 Score = 94.1 bits (232), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 73/183 (39%), Gaps = 11/183 (6%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           R H+ L R   +  IA   +GV  +     ++ + + + ++ ++      E+  P +L  
Sbjct: 21  RSHQLLVRAGYIRQIA---TGVYAYLPLAQRVMKKITAIIKDELDAIGANEMQMPNILPM 77

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             WQ     D     +      + + ++ R + L P      + +  + ++SYR+LP++L
Sbjct: 78  DYWQ-----DDACRRLCTSSLFEVSDRNQRQYMLAPSQEKAFIELVRNEVQSYRKLPLKL 132

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT-KEQMFNECLKIHNLIISIYKDFGFE 421
            +    YR+E      G +  R F   D + F      +     ++ + I +I    G  
Sbjct: 133 YQVQMKYRDEKKPKF-GFLYSREFLMTDFYSFHAGAVSLEQTYQQVESSIKTILARCGLT 191

Query: 422 KIM 424
             +
Sbjct: 192 YHL 194



 Score = 64.4 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 28/148 (18%), Positives = 50/148 (33%), Gaps = 8/148 (5%)

Query: 501 NLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL---SPIQAIV 557
                 +A +++   +   P  I     G       I+ ++   N   W    +P  A V
Sbjct: 404 EYSQALSAQFIDETGQAV-PTRICYCSIGVSRLLSLIVEQHCDENKIQWPNTVAPFDAHV 462

Query: 558 TTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
             I    S   +   EI   ++     +  D R E    K  +  +   PI I  G K A
Sbjct: 463 VPIDYQDSDQQQLTDEIVEQMEQAEYEVLLDDRVERAGVKFADADLIGCPIRITIGKK-A 521

Query: 615 SERSIGIRRFGSTTTQKVSLLDAIPILT 642
            E  + I+   S  + ++   + +  L 
Sbjct: 522 KEGIVEIKLHQSGDSLEIRKEELVATLA 549


>gi|296816643|ref|XP_002848658.1| prolyl-tRNA synthetase [Arthroderma otae CBS 113480]
 gi|238839111|gb|EEQ28773.1| prolyl-tRNA synthetase [Arthroderma otae CBS 113480]
          Length = 589

 Score = 94.1 bits (232), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 35/146 (23%), Positives = 63/146 (43%), Gaps = 7/146 (4%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SGV      G ++ + L   + + ++  +  +++   +  Q LW++SG      + +F +
Sbjct: 35  SGVFHLLPLGLRVQEKLERLIDKHMRKLNASKLSLSSLSSQSLWKKSGRLHEGDSEVFRL 94

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
                T        L P +      V +  +KSYR+LP+R+ +    YR+EP    HGL+
Sbjct: 95  LDRKKTP-----LLLAPTHEEEITTVISSLVKSYRDLPLRVYQISRKYRDEPRPR-HGLL 148

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLKI 407
           R R F   D + F + E         
Sbjct: 149 RGREFVMKDLYTFDSTEAEAINTYNT 174



 Score = 55.9 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 47/110 (42%), Gaps = 5/110 (4%)

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLK-SHHLSIE--TDFRNETINY 593
           I+ +N   N P  ++P Q  V        E A+ + + +   +  +++   D RN+   +
Sbjct: 474 ILADNKGLNWPQAIAPFQVAVVPAKGLEKE-AELVYDSVAGQNGETVDTILDDRNKDFIW 532

Query: 594 KIREHSIKKIPIIIICGDKE-ASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           K+R+  +   PII+  G K   +   + ++       +    L+ IP L 
Sbjct: 533 KLRDADLVGYPIILAVGKKSWNAGNQVEVQCRQLENLRTTVSLEEIPKLV 582


>gi|18311446|ref|NP_563380.1| glycyl-tRNA synthetase [Clostridium perfringens str. 13]
 gi|110798906|ref|YP_697152.1| glycyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
 gi|110803756|ref|YP_699720.1| glycyl-tRNA synthetase [Clostridium perfringens SM101]
 gi|168206859|ref|ZP_02632864.1| glycyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
 gi|168211214|ref|ZP_02636839.1| glycyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626]
 gi|168215148|ref|ZP_02640773.1| glycyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
 gi|168218224|ref|ZP_02643849.1| glycyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
 gi|169343166|ref|ZP_02864187.1| glycyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
 gi|182625996|ref|ZP_02953759.1| glycyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
 gi|59798596|sp|Q8XHL9|SYG_CLOPE RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|18146130|dbj|BAB82170.1| glycine-tRNA ligase [Clostridium perfringens str. 13]
 gi|110673553|gb|ABG82540.1| glycyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
 gi|110684257|gb|ABG87627.1| glycine--tRNA ligase [Clostridium perfringens SM101]
 gi|169298718|gb|EDS80794.1| glycyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
 gi|170661742|gb|EDT14425.1| glycyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
 gi|170710778|gb|EDT22960.1| glycyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626]
 gi|170713451|gb|EDT25633.1| glycyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
 gi|177908703|gb|EDT71214.1| glycyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
 gi|182379763|gb|EDT77242.1| glycyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
          Length = 467

 Score = 94.1 bits (232), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 50/346 (14%), Positives = 110/346 (31%), Gaps = 50/346 (14%)

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEP 373
           + N+        T        L+P    G    F    ++  +++P  +A+ G  +RNE 
Sbjct: 151 KFNLMFKTFQGITEDSKNEVYLRPETAQGIFVNFKSVQRTTRKKVPFGIAQIGKSFRNEI 210

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
           +   +   R R F Q +   FC             +   +   + G ++  +++      
Sbjct: 211 TPG-NFTFRTREFEQMELEFFCKPGTDLEWFNFWKDSCWNFLLNLGMKEENIRMRDH--- 266

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
             G + L             +  +++   I      G G  +G   +    D        
Sbjct: 267 --GEEEL-------------SFYSNATSDIEYLFPFGWGELWGIA-DRTDYDLNKHAEHS 310

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK---------- 543
           G            +  Y++  + + +   +     G+    +  ++E +           
Sbjct: 311 GQ-----------DMTYLDPTTNEKYVPYVIEPSLGADRVALAFLVEAYDEEELEGANGK 359

Query: 544 ------GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
                  +L   L+P +A +  ++    E A E+   L  H  +++ D    +I  + R 
Sbjct: 360 VDVRTVMHLHPALAPFKAAILPLSKKLSEKADEVYAELSKH-FNVDYDETG-SIGKRYRR 417

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
                 P  I        +  + +R   +   Q+V + D   I+ K
Sbjct: 418 QDEIGTPFCITVDFDTLEDGCVTVRDRDNMEQQRVKIEDVRAIIEK 463


>gi|290969304|ref|ZP_06560829.1| phosphoribulokinase/uridine kinase family protein [Megasphaera
           genomosp. type_1 str. 28L]
 gi|290780810|gb|EFD93413.1| phosphoribulokinase/uridine kinase family protein [Megasphaera
           genomosp. type_1 str. 28L]
          Length = 546

 Score = 94.1 bits (232), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 35/244 (14%), Positives = 83/244 (34%), Gaps = 5/244 (2%)

Query: 7   LTFPDGSIK---NFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           +T  D +           +   V      +   +  A   N     L   V  +G I   
Sbjct: 2   ITITDRTQHKTYTVEEGISLETVVREQYATAQPRIAAALYNRDFVGLDTKVTADGEITWF 61

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
           +       + ++ +   ++  AV  ++P  +V +   +    Y +       +  ++  I
Sbjct: 62  SLGTVEGNSCLQRTAIMLLVRAVDDLYPGGKVFVKHALRKALYCELSIGHTVTVRDVKMI 121

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           +++M+E++A+D    +     E A E+  ++    + E+L+ +    ++  Y+ G  FD 
Sbjct: 122 QQRMEEMVAQDEKLTQVITGTEMAMEMCRNRHMEREAELLQHL-DIHHIMAYQCGRIFDY 180

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
             GP + S G +  F       G      + +   +            L           
Sbjct: 181 YMGPLLPSMGYITCFHVRSYAPGIILELPTPQSPEALPVYKEIPKMARLFLDAESWGRIV 240

Query: 243 KRDH 246
           + ++
Sbjct: 241 RCEY 244


>gi|242021788|ref|XP_002431325.1| mitochondrial 50S ribosomal protein L39, putative [Pediculus
           humanus corporis]
 gi|212516593|gb|EEB18587.1| mitochondrial 50S ribosomal protein L39, putative [Pediculus
           humanus corporis]
          Length = 347

 Score = 94.1 bits (232), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 46/239 (19%), Positives = 87/239 (36%), Gaps = 24/239 (10%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGK-VCDLSDPVR-EGSIEIITPEDPRS---LAVIRH 75
           +T  D  + IS  + +++    IN + + D+  P+  E +I+ +T +D            
Sbjct: 78  STPYDCCKHISLPVCQQSALALINDEFLWDMHRPLPGECTIQFLTFKDEDPYSLNKAFWR 137

Query: 76  SCAHIMAEAVQSIWPE---VQVAIGPI--IEDG-FYYDFDKE---QPFSSDELAQIEKKM 126
           + + ++   +   + E   + +   P   I+ G F YD          + DEL  +  + 
Sbjct: 138 TGSFVLGAVISKAFKENVKIHLHSFPPPYIKSGSFIYDVVMNVDNWVPTIDELRILSAEF 197

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIP---AKENVTLYRQGEWFDLC 183
              +  +    +  +    A E+FE     YK+  +  I      + +TLYR  +  D+ 
Sbjct: 198 ILFVQGNHKIERLKVKKSIAIEIFE--DNPYKLAQIPEIARQAEDKMITLYRVNDHIDIS 255

Query: 184 RGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
            GP V  T     F K        +        + R  G A      L  + Y + E  
Sbjct: 256 NGPMVADTSF---FGKCSITNVIGYHNGKEN--IYRFQGIALPKGILLNNFAYKILEER 309


>gi|302497924|ref|XP_003010961.1| hypothetical protein ARB_02859 [Arthroderma benhamiae CBS 112371]
 gi|291174507|gb|EFE30321.1| hypothetical protein ARB_02859 [Arthroderma benhamiae CBS 112371]
          Length = 581

 Score = 94.1 bits (232), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 36/160 (22%), Positives = 61/160 (38%), Gaps = 13/160 (8%)

Query: 255 LFHIAE------DGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHL-WQQ 307
           +F I           GV      G ++ + L   + + ++       +   L     W++
Sbjct: 12  IFWIPSGGIAESKNGGVFHLLPLGLRVQEKLERLIDKHMRKLSASKLSLSSLSSQALWKK 71

Query: 308 SGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGS 367
           SG      + +F       T      F L P +      V +  +KSYR+LP+R+ +   
Sbjct: 72  SGRLHDDDSEVFRFVDRKKTP-----FLLAPTHEEEITTVVSGLIKSYRDLPLRVYQISR 126

Query: 368 VYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
            YR+EP    HGL+R R F   D + F + E    +    
Sbjct: 127 KYRDEPRPR-HGLLRGREFVMKDLYTFDSTEAEAIKTYNT 165



 Score = 58.3 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 31/131 (23%), Positives = 49/131 (37%), Gaps = 11/131 (8%)

Query: 517 KCHPVMIHRAVFGS-IERFIG----IMIENFKGNLPLWLSPIQAIVTTIT--SSAVEYAQ 569
           K  PV I     G  + R I     I+ +    N P  ++P Q  V          E   
Sbjct: 441 KQEPVPIQMGCHGIGVSRMISAVSDILADEKGLNWPQAIAPFQVAVVPGKGLEKEGELVY 500

Query: 570 EIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE-ASERSIGI--RRFGS 626
           +I        +    D R +   +K+R+  I   PII+  G     +   + +  RR G+
Sbjct: 501 DIVTQKTQQPIDTILDDRKKDFAWKLRDADIIGYPIILAVGKNSWGAGNKVEVQCRRLGN 560

Query: 627 TTTQKVSLLDA 637
             T+ VSL + 
Sbjct: 561 LRTK-VSLEEV 570


>gi|71893413|ref|YP_278859.1| glycyl-tRNA synthetase [Mycoplasma hyopneumoniae J]
          Length = 456

 Score = 94.1 bits (232), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 63/338 (18%), Positives = 114/338 (33%), Gaps = 37/338 (10%)

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEP 373
           + N+           +     L+P    G    F + L++    LP+ +A+ G  +RNE 
Sbjct: 145 KFNLLFPTYQGIIEDEKTLLYLRPETAQGIFINFKNLLRTTKNSLPLIIAQVGKSFRNEI 204

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE- 432
           S   + + R R F Q +  +F   +Q  N        I +  K  GF K  ++L+   + 
Sbjct: 205 SPG-NFIFRTREFVQLELEIFLKPDQSENFFQNEIEKIKNFLKKLGFAKNSIRLNYHKKE 263

Query: 433 ---KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGR 489
                  + A ++   N   G L  I N     +       E +  G K E+ +  A G+
Sbjct: 264 KLAHYAKATADFEYNFNFGWGELIGISNRGDYDLK---NHSEKS--GEKLEF-VDSATGK 317

Query: 490 DWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI--MIENFKGNLP 547
            +    I+    L                      R +   +E       +   +   LP
Sbjct: 318 KFLPHIIEPSMGLD---------------------RLMLAVLEECFCFDSVKNRYFLKLP 356

Query: 548 LWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIII 607
             LSP +  V  +       A++I N L S  +S        +I  +     +      I
Sbjct: 357 FILSPYKVAVLPLLKKFNFLAEKIWNELISQKISATLVTSG-SIGKRYYHQDVIGTYFCI 415

Query: 608 ICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
               K      + +R   +T  + + + + I    KE+
Sbjct: 416 TIDQKSVENSIVTLRFRDTTEQKTLKIDE-ITKFIKEN 452


>gi|116180206|ref|XP_001219952.1| hypothetical protein CHGG_00731 [Chaetomium globosum CBS 148.51]
 gi|88185028|gb|EAQ92496.1| hypothetical protein CHGG_00731 [Chaetomium globosum CBS 148.51]
          Length = 562

 Score = 94.1 bits (232), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 42/200 (21%), Positives = 77/200 (38%), Gaps = 21/200 (10%)

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQ 302
           +  H KL R   L    +  +G+      G ++   +   +  ++++          L +
Sbjct: 25  EDAHAKLIRAGFLR---QSNAGMFHMLPLGNRVQDKVERLVASRMEE----------LLE 71

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
            LW++SG  D+  + +F      D       + L P +      +    +KSY+ELP+RL
Sbjct: 72  SLWEKSGRLDNVASELFRFSDRRDVP-----YLLAPTHEEEITTLAARSVKSYKELPLRL 126

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            +    YR+E     HGL+R R F   D + F +      E         +  + F   K
Sbjct: 127 YQITRKYRDEFRPR-HGLLRGREFIMKDLYTFDSSVDSALETYNDVRAAYN--QIFSDMK 183

Query: 423 IMVKLSTRPEKRVGSDALWD 442
           + V  +      +G D   +
Sbjct: 184 LPVLSAKASSGDMGGDLSHE 203



 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 51/130 (39%), Gaps = 11/130 (8%)

Query: 519 HPVMIHRAVFGS-IERFIGIMIENFKG----NLPLWLSPIQAIVTTITSSAVEYAQEIAN 573
            P  +    +G  I R IG   E+       N P  ++P   +V     +    A ++  
Sbjct: 422 QPTPLQMGCYGIGISRIIGAAAEHLADQTGLNWPAAIAPYSCVVIPGKDADEGDAVQVYQ 481

Query: 574 LLK------SHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGST 627
            ++         + +  D R +++ +K+ +  +   P+I++ G +  + R + ++     
Sbjct: 482 QIEGIVGPERRLVDVVLDDRAKSLPWKMADADLIGFPVIVLLGREWRAARRVEVQCRRLG 541

Query: 628 TTQKVSLLDA 637
             Q V + D 
Sbjct: 542 VKQAVEIADL 551


>gi|327293800|ref|XP_003231596.1| prolyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
 gi|326466224|gb|EGD91677.1| prolyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
          Length = 631

 Score = 94.1 bits (232), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 39/175 (22%), Positives = 65/175 (37%), Gaps = 10/175 (5%)

Query: 244 RDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQH 303
             +  L R   L       SGV      G ++ + L   + + ++       +   L   
Sbjct: 60  DSNDLLIRAGFLRQPY---SGVFHLLPLGLRVQEKLERLIDKYMRKLSASKLSLSSLSSQ 116

Query: 304 L-WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             W++SG      + +F       T      F L P +     +V +  +KSYR+LP+R+
Sbjct: 117 ALWKKSGRLHDDDSEVFRFVDRKKTP-----FLLAPTHEEEITSVVSGLIKSYRDLPLRV 171

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
            +    YR+EP    HGL+R R F   D + F + E    +         S    
Sbjct: 172 YQISRKYRDEPRPR-HGLLRGREFVMKDLYTFDSTEAEAIKTYNTVKEAYSSLFK 225



 Score = 58.3 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/131 (23%), Positives = 50/131 (38%), Gaps = 11/131 (8%)

Query: 517 KCHPVMIHRAVFGS-IERFIG----IMIENFKGNLPLWLSPIQAIVTTIT--SSAVEYAQ 569
           K  PV I     G  + R I     I+ +    N P  ++P Q +V          E   
Sbjct: 491 KPEPVPIQMGCHGIGVSRMISAVSDILADEKGLNWPQAIAPFQVVVVPGKGLEKEGELVY 550

Query: 570 EIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE-ASERSIGI--RRFGS 626
           +I        +    D R +   +K+R+  I   PII+  G     +   + +  RR G+
Sbjct: 551 DIVTQKTKQPIDTILDDRKKDFAWKLRDADIIGYPIILAVGKNSWGAGNKVEVQCRRLGN 610

Query: 627 TTTQKVSLLDA 637
             T+ VSL + 
Sbjct: 611 LRTK-VSLEEV 620


>gi|294654601|ref|XP_456661.2| DEHA2A07678p [Debaryomyces hansenii CBS767]
 gi|199429004|emb|CAG84617.2| DEHA2A07678p [Debaryomyces hansenii]
          Length = 576

 Score = 94.1 bits (232), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 44/225 (19%), Positives = 82/225 (36%), Gaps = 14/225 (6%)

Query: 213 NRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKG 272
               +   + +           L   + +    H    +      I     G++ W   G
Sbjct: 10  RHLCVRFTHTSTVPKLYLNNVELSGNDLTGIPTHELFTKFG---FINHPKPGLVHWLPVG 66

Query: 273 WKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
             I Q +   + R++++ + EEIN   +    LWQ++G WD+  + +F +K         
Sbjct: 67  LAISQNVSRVIHRRMRECNAEEINLSLLSSSQLWQETGRWDN--SELFKLKD-----SSK 119

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
             F L          +    L SY+ LP+   +    +R+E      GL+R R F   DA
Sbjct: 120 NDFCLVATCEEEITKLIGANLNSYKNLPLLYYQINEKFRDEKRPR-SGLLRGREFLMKDA 178

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
           + F   E+   +      ++ + YK F   +I    +      +G
Sbjct: 179 YSFDLNEEAAMKTYN--KVVDAYYKIFQDLRIPFVKADADTGEIG 221



 Score = 44.8 bits (104), Expect = 0.050,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 52/142 (36%), Gaps = 14/142 (9%)

Query: 487 IGRDWQCGTIQV---DFNLPSRFNAFYVNSHSEKC-HPVMIHRAVFGSIERFIGIMIENF 542
           + R  + G        ++ P +      N    +    V++     G I R I  + E  
Sbjct: 382 LHRAIEVGHTFYLGDKYSKPLKCEVEVPNQDGSQQLTNVLMGCYGIG-ISRIIAAIGEIN 440

Query: 543 KG----NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET-INYKIRE 597
           K       P  ++P    V            ++ NLL +  +S   D R++  +  KI++
Sbjct: 441 KDSTGFRWPSVIAPWNVTVVQSPKFDDSKGIKVYNLLNAASISYRLDDRSKIGLGKKIKQ 500

Query: 598 HSIKKIPIIIICGDK----EAS 615
             +  IP+ +I G++    E  
Sbjct: 501 SHMVGIPLTVILGNQFPLVEVE 522


>gi|121701845|ref|XP_001269187.1| prolyl-tRNA synthetase [Aspergillus clavatus NRRL 1]
 gi|119397330|gb|EAW07761.1| prolyl-tRNA synthetase [Aspergillus clavatus NRRL 1]
          Length = 553

 Score = 94.1 bits (232), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 38/159 (23%), Positives = 67/159 (42%), Gaps = 11/159 (6%)

Query: 269 HRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
              G ++   L   + + ++     +++   +  Q LW+QSG      + +F      ++
Sbjct: 2   LPLGLRVQDKLERLIDKHMQSVGASKVSLSSISSQELWEQSGRL-KEGSEVFRFHDRKES 60

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
                 F L P +      +     KSYR+LPVR+ +    YR+E      GL+R R F 
Sbjct: 61  -----RFLLAPTHEEEITTLVGSLTKSYRDLPVRVYQISRKYRDEARPR-QGLLRGREFM 114

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK 426
             D + F   +    E LK +NL+ + YK+   E  +  
Sbjct: 115 MKDLYTF---DYNVEEALKTYNLVKAAYKNLFDELKIPY 150



 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/161 (19%), Positives = 64/161 (39%), Gaps = 12/161 (7%)

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG- 544
           +G  +  GT   +    S      ++  + K   V +     G  + R I  + +N    
Sbjct: 384 LGHTFHLGTRYSEVLQASVMVDQSLSGGAAKDQQVPMQMGCHGIGVSRMISAVADNLADS 443

Query: 545 ---NLPLWLSPIQAIVTTITSSAVEYAQEIANLL---KSHHLSIETDFRNETINYKIREH 598
              N P  ++P + +V        E A+++ +LL   +S  +    D R + + +K+ + 
Sbjct: 444 KGLNWPRAMAPYEVVVVPGKGLETE-AEKVYDLLASKQSSPIDTILDDREKPMGWKLSDA 502

Query: 599 SIKKIPIIIICGD--KEASERSIGIRRFGSTTTQKVSLLDA 637
            +   P+II+ G   K+     +  RR  +   ++V L   
Sbjct: 503 DLIGYPVIIVVGKGWKKQQTLEVQCRRLDNL-REEVPLDQL 542


>gi|295111976|emb|CBL28726.1| Uridine kinase [Synergistetes bacterium SGP1]
          Length = 547

 Score = 93.7 bits (231), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 75/183 (40%), Gaps = 4/183 (2%)

Query: 18  PVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPEDPRSLAVIRHS 76
               TG +V   +  +   + +A  +N     L   + + + +E +    P  L + + S
Sbjct: 17  ETPVTGHNVLADLDSAEKGRVIAWRVNNYTRPLGWVIDDDAAVEFVLTTSPDGLRIYQRS 76

Query: 77  CAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPF 136
              ++  A +      +  +   I +G Y++ + + P +  ++ ++   M E++  D P 
Sbjct: 77  LDFLLVIACEKTL-NRKAVLRHSIGEGHYWELE-DGPVTQSDVYKLHAAMSEMVHEDLPI 134

Query: 137 LKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKK 196
            ++ L  +KA+ +F+ + E    ++         V +YR    +    G    STG ++ 
Sbjct: 135 TRKILPIDKAKRIFQEQGEPEIADLFVRANLDP-VEVYRCSSRYGYFCGAMAPSTGLLRT 193

Query: 197 FFK 199
           F  
Sbjct: 194 FDL 196


>gi|12045105|ref|NP_072916.1| glycyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|1351155|sp|P47493|SYG_MYCGE RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|3844849|gb|AAC71471.1| glycyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|166079054|gb|ABY79672.1| glycyl-tRNA synthetase [synthetic Mycoplasma genitalium JCVI-1.0]
          Length = 446

 Score = 93.7 bits (231), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 72/474 (15%), Positives = 143/474 (30%), Gaps = 103/474 (21%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR---K 286
               Y   +     + H  + +  +++      +    +   G  + Q +   +     K
Sbjct: 1   MAKVYNQEVYVQFLKQHGFVFQSSEIY---NGLNNSWDFGPLGAVLKQQIKQALYNFFIK 57

Query: 287 IKDDYEEINTPQVLDQHLWQQSGHWDSY-------------------------------- 314
            K D   + TP +L + +W+ SGH  ++                                
Sbjct: 58  NKADVLLVETPIILSELVWKASGHLANFVDTLVDCKSCKYRFRVDQINAEIKAKKDWNSF 117

Query: 315 ----------------RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY-RE 357
                             N+           D R   L+P    G    F + L++  R 
Sbjct: 118 KVNCPNCHNQNWSEVRDFNLLFQTEIGVVNNDKRLVFLRPETAQGSFINFKNILQAKKRN 177

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP  +A+FG  +RNE +   + L R R F Q +   FC  +   +   K   ++    + 
Sbjct: 178 LPFAIAQFGKSFRNEITPG-NFLFRTREFEQFEIEWFCKPDDANSLFEKQLIMVEQFLQT 236

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
                              +  L    E     +    K ++    N     G    +G 
Sbjct: 237 VLKI---------------NPELLKKHEYDQSELAHYAKKTTDFLFNFP--HGLKELWGL 279

Query: 478 KF--EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
               ++ LK                    +  +F+ +  ++   P +I  AV   IER  
Sbjct: 280 ANRGDFDLK-------------QHQEFSKKSMSFFDSELNQHFLPFIIEPAV--GIERLF 324

Query: 536 GIMI------------ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIE 583
             +I            E    +LP  L P Q IV  + +   + A  +   L      + 
Sbjct: 325 YALIVSSYRREIINEEEREVLSLPFDLCPEQIIVLPLVNKLKKEAFSVFETLAKTRWRVC 384

Query: 584 TDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
            +    +I  + R+     I   +    +   + ++ IR   +   Q++++ + 
Sbjct: 385 FETTG-SIGKRYRKADAIGIKYAVTFDFESLEDNAVTIRDRDTLVQQRIAIKEL 437


>gi|289450135|ref|YP_003475729.1| glycine--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5]
 gi|289184682|gb|ADC91107.1| glycine--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5]
          Length = 462

 Score = 93.7 bits (231), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 47/342 (13%), Positives = 104/342 (30%), Gaps = 46/342 (13%)

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEP 373
           + N+        T  +     L+P    G    F +  + S ++LP  + + G  +RNE 
Sbjct: 150 KFNLMFKTFQGVTEDNKSELYLRPETAQGIFVNFRNVQRTSRKKLPFGICQVGKSFRNEI 209

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
           +   +   R R F Q +   FC  +   +      +   +  K  G  +  ++L     +
Sbjct: 210 TPG-NFTFRTREFEQMELEFFCNPDTDLDWFHYWKDFCYNWLKTLGIAETELRLRDHRPE 268

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
            +   + +  A   +   L          I                       +GR  + 
Sbjct: 269 EL---SFYSKATTDI-EFLFPFGWGELWGIADRTNYD----------------LGRHME- 307

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI-----ENFKG---- 544
                     SR +  Y +  + + +   +     G+    +  +      E   G    
Sbjct: 308 ---------ASRQDLTYFDPETNEKYIPYVVEPSLGADRVALAFLCAAYDEETLAGGDIR 358

Query: 545 ---NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
                   L+P++  V  +++   E A+ +  +L     + E D R   I  + R     
Sbjct: 359 TVLRFHPALAPVKIAVLPLSAKLTEAARPLYEMLSKIG-NCELDDRQG-IGKRYRRQDEI 416

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             P  +       ++  + +R   S    ++ + +       
Sbjct: 417 GTPYCVTYDFDSVNDNCVTVRERDSMEQVRLPIAELTAYFAD 458


>gi|223041833|ref|ZP_03612022.1| prolyl-tRNA synthetase [Actinobacillus minor 202]
 gi|223017360|gb|EEF15782.1| prolyl-tRNA synthetase [Actinobacillus minor 202]
          Length = 263

 Score = 93.7 bits (231), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 60/168 (35%), Gaps = 14/168 (8%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           I R  + G I Q+         A       +   P+++    +G  + R +   IE +  
Sbjct: 95  IKRGIEVGHIFQLGTKYSEAMKATVQGEDGK---PLIMTMGCYGIGVTRVVAAAIEQHHD 151

Query: 544 GNLPLWL----SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
               +W     +P    +  +    +     +A+E+   LK+  + +  D R E      
Sbjct: 152 ERGIIWPSDEIAPFTVAIVPMNMHKSEKVQAFAEELYKTLKAQGVDVIFDDRKERPGVMF 211

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +  +  +P +++ G+K      I  +   +   Q ++    +  L +
Sbjct: 212 ADMELIGVPHMVVIGEKNLENGEIEYKNRRTGEKQMIAKEQLLAFLAE 259


>gi|68071553|ref|XP_677690.1| aminoacyl-tRNA synthetase [Plasmodium berghei strain ANKA]
 gi|56497903|emb|CAH98595.1| Bi-functional aminoacyl-tRNA synthetase, putative [Plasmodium
           berghei]
          Length = 324

 Score = 93.7 bits (231), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 40/198 (20%), Positives = 71/198 (35%), Gaps = 16/198 (8%)

Query: 453 DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV-DFNLPSRFNAFYV 511
           + +       I +      GA +    E  + ++ GR  Q  T      N    F   + 
Sbjct: 15  ECLAVPVIKGIKSEGEKFGGANFTSTNETFISES-GRAIQAATSHYLGTNFAKMFKIEFE 73

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTTITSSAVE- 566
           +    K     +H+  +G   R IG+MI     N  L L P     +A++  I     + 
Sbjct: 74  DEQENKQ---FVHQTSWGCTTRSIGVMIMIHSDNKGLILPPNVAKYKAVIVPILYKNSDE 130

Query: 567 -----YAQEIANLLKSHHLSIETDFRN-ETINYKIREHSIKKIPIIIICGDKEASERSIG 620
                Y ++I  +LK+  ++   D R+  +  YK     ++ IPI I  G K+    S  
Sbjct: 131 TAIFNYCKDIEKVLKNAQINCIFDDRDLYSPGYKFNHWELRGIPIRIEVGPKDIQNNSCV 190

Query: 621 IRRFGSTTTQKVSLLDAI 638
             R  +     +     +
Sbjct: 191 FVRRDNNQKFNIKKESVL 208


>gi|327357537|gb|EGE86394.1| prolyl-tRNA synthetase [Ajellomyces dermatitidis ATCC 18188]
          Length = 601

 Score = 93.7 bits (231), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 35/181 (19%), Positives = 69/181 (38%), Gaps = 9/181 (4%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SGV      G ++ + L   + + ++     +++   +  Q LW++SG       +    
Sbjct: 42  SGVFHMLPLGLRVQEKLERLVDKHMRTLGASKLSLSSISSQALWEKSGRLKK---DSEFF 98

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
           K  D   +    F L P +     ++    + SYR+LP+R+ +    YR+EP     GL+
Sbjct: 99  KFQD---RKEARFLLAPTHEEEITSLVAGAVNSYRDLPLRVYQISRKYRDEPRPR-QGLL 154

Query: 382 RVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           R R F   D + F  + E        +    I ++ +     ++    +       S   
Sbjct: 155 RGREFIMKDLYTFDYSPETAIKTYSAVKKAYIRLFDELRIPYMIATADSGNMGGSLSHEF 214

Query: 441 W 441
            
Sbjct: 215 H 215



 Score = 64.4 bits (155), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 23/125 (18%), Positives = 52/125 (41%), Gaps = 8/125 (6%)

Query: 520 PVMIHRAVFGSIERFIGI---MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLK 576
           P+ +     G       +   + ++   N P  ++P + I+        E A+ + + + 
Sbjct: 467 PLEMGCHGIGVSRMISAVADTLADSKGLNWPRAIAPFEVIIIPDKGLEGE-AERVYDDIN 525

Query: 577 SHHL---SIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR-RFGSTTTQKV 632
              +    +  D R+  I +K+R+  +   P+II+ G    +E  + ++ R  +   + V
Sbjct: 526 GRQIGAVDVIVDDRDRNIPWKLRDADLIGYPVIIVIGKSWKTENKLEVQCRRLNNLRETV 585

Query: 633 SLLDA 637
           SL D 
Sbjct: 586 SLQDL 590


>gi|229828457|ref|ZP_04454526.1| hypothetical protein GCWU000342_00519 [Shuttleworthia satelles DSM
           14600]
 gi|229793051|gb|EEP29165.1| hypothetical protein GCWU000342_00519 [Shuttleworthia satelles DSM
           14600]
          Length = 587

 Score = 93.3 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 45/210 (21%), Positives = 79/210 (37%), Gaps = 16/210 (7%)

Query: 12  GSIKNFPVHATGSDVAESI----SRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPED 66
           G    +    +  ++A+ I     ++  +  V   ++  + +L     EG  I  +T  D
Sbjct: 35  GKTHKYAEGTSLLEIAKEITERDPQAYPEDIVLAEVDHHLRELGHVAEEGEKIRFLTSVD 94

Query: 67  PRSLAVIRHSCAHIMAEAVQSIWPEVQVAI--GPIIEDGFYY-----DFDKEQPFS---S 116
                  R S   +M  A   + P+ Q+ I     +  G++      + D     S   +
Sbjct: 95  KNGRRAYRRSLILLMQAAAARLDPDRQMDIRVEHSLGQGYFCHIYSREKDGFHLLSHPQA 154

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
             +AQ+  +M  +   D P +K+ +S EK R+ F  +    KV +L       +  LY  
Sbjct: 155 SLIAQLRDQMLAMADEDIPIVKRSVSTEKVRDYFRREGLVDKVSLL-RYRMDSHTNLYDL 213

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVAGA 206
               D   G  V STG +K F       G 
Sbjct: 214 EGVSDYFYGYMVPSTGLLKYFDLQTFTDGF 243


>gi|144575262|gb|AAZ53435.2| glycyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448]
          Length = 455

 Score = 93.3 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 62/341 (18%), Positives = 113/341 (33%), Gaps = 43/341 (12%)

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEP 373
           + N+           +     L+P    G    F + L++    LP+ +A+ G  +RNE 
Sbjct: 144 KFNLLFPTYQGIIEDEKTLLYLRPETAQGIFINFKNLLRTTKNSLPLIIAQVGKSFRNEI 203

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
           S   + + R R F Q +  +F   +Q  N        I +  K  GF K  ++L+     
Sbjct: 204 SPG-NFIFRTREFVQLELEIFLKPDQSENFFQNEIEKIKNFLKKLGFAKNSIRLNYH--- 259

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
                      E +      T+          G L+G  +  G   +Y LK+   +  + 
Sbjct: 260 ---------KKEKLAHYAKATVDFEYNFNFGWGELIG-ISNRG---DYDLKNHSEKSGE- 305

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE---------NFKG 544
                           +V+S + K     I     G     + ++ E          +  
Sbjct: 306 -------------KLEFVDSATGKKFLPHIIEPSMGLDRLMLAVLEECFCFDSVKNRYFL 352

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
            LP  LSP +  V  +       A++I N L S  +S        +I  +     +    
Sbjct: 353 KLPFILSPYKVAVLPLLKKFNFLAEKIWNELISQKISATLVTSG-SIGKRYYHQDVIGTY 411

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
             I    K      + +R   +T  + + + + I    KE+
Sbjct: 412 FCITIDQKSVENSIVTLRFRDTTEQKTLKIDE-ITKFIKEN 451


>gi|162447247|ref|YP_001620379.1| phosphoribulokinase/uridine kinase family protein [Acholeplasma
           laidlawii PG-8A]
 gi|161985354|gb|ABX81003.1| phosphoribulokinase/uridine kinase family protein [Acholeplasma
           laidlawii PG-8A]
          Length = 544

 Score = 92.9 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 82/197 (41%), Gaps = 6/197 (3%)

Query: 11  DGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRS 69
           +  +       T   +A+ ++ S    A+   ++G++ +LS  +  +  IE +  +    
Sbjct: 6   NNEVLELKEPLTLEKLAQKLNIS---NAIFATVDGRMRELSYMIANDADIEFMGLDSDVG 62

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
           + +   +  ++  +A+  + P  Q+     I        + +   + +    + KK+QEI
Sbjct: 63  MRIYEATLRYVFTKALYELDPTKQIRFSYSISRSILATIENDD-MTVELYEMLLKKVQEI 121

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
           I R     +  +S E+A +L+  +    K+E L  +  + +V LY+  ++ +      + 
Sbjct: 122 IERKVDIKRIKVSKEEATKLYTKQNYLDKIETL-KLRKENHVNLYQSDDFINYMFSYMLP 180

Query: 190 STGQVKKFFKLMKVAGA 206
           +T  + KF       G 
Sbjct: 181 NTSYLTKFDTKFYNPGF 197


>gi|291522457|emb|CBK80750.1| glycyl-tRNA synthetase, dimeric type [Coprococcus catus GD/7]
          Length = 465

 Score = 92.9 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 48/345 (13%), Positives = 108/345 (31%), Gaps = 51/345 (14%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPS 374
            N+        T     T  L+P    G    F +  + S +++P  + + G  +RNE +
Sbjct: 151 FNLMFKTFQGVTEDAKNTVYLRPETAQGIFVNFKNVQRTSRKKIPFGIGQIGKSFRNEIT 210

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              +   R R F Q +   FC  +             I+  +  G +   +++     + 
Sbjct: 211 PG-NFTFRTREFEQMELEFFCEPDTDLEWFAYWKEFCINWLQTLGIKPDEMRVRDHEAEE 269

Query: 435 ----------------VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
                            G   LW  A+     +   ++ S +D +      G+   Y P 
Sbjct: 270 LSFYSKATSDIEFLFPFGWGELWGIADRTNYDLSRHMEVSGED-LTYF-DEGKKEKYIP- 326

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
             ++++ ++G D               ++   + +  +     ++H              
Sbjct: 327 --FVIEPSLGADRVVLAFLCGA-----YDEENIGTEEKPDMRTVLH-------------- 365

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
                      L+P++  V  ++    E A+ +   L  +  + E D R   I  + R  
Sbjct: 366 -------FHPALAPVKIGVLPLSKKLGEKAEAVYAELSKN-WNCEYDDRGN-IGKRYRRQ 416

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
                P  +        +  + +R   +   ++V + D      +
Sbjct: 417 DEIGTPFCVTYDFDSEEDGCVTVRDRDTMEQERVKIEDLTAYFME 461


>gi|72080400|ref|YP_287458.1| glycyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448]
          Length = 456

 Score = 92.9 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 62/341 (18%), Positives = 113/341 (33%), Gaps = 43/341 (12%)

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEP 373
           + N+           +     L+P    G    F + L++    LP+ +A+ G  +RNE 
Sbjct: 145 KFNLLFPTYQGIIEDEKTLLYLRPETAQGIFINFKNLLRTTKNSLPLIIAQVGKSFRNEI 204

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
           S   + + R R F Q +  +F   +Q  N        I +  K  GF K  ++L+     
Sbjct: 205 SPG-NFIFRTREFVQLELEIFLKPDQSENFFQNEIEKIKNFLKKLGFAKNSIRLNYH--- 260

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
                      E +      T+          G L+G  +  G   +Y LK+   +  + 
Sbjct: 261 ---------KKEKLAHYAKATVDFEYNFNFGWGELIG-ISNRG---DYDLKNHSEKSGE- 306

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE---------NFKG 544
                           +V+S + K     I     G     + ++ E          +  
Sbjct: 307 -------------KLEFVDSATGKKFLPHIIEPSMGLDRLMLAVLEECFCFDSVKNRYFL 353

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
            LP  LSP +  V  +       A++I N L S  +S        +I  +     +    
Sbjct: 354 KLPFILSPYKVAVLPLLKKFNFLAEKIWNELISQKISATLVTSG-SIGKRYYHQDVIGTY 412

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
             I    K      + +R   +T  + + + + I    KE+
Sbjct: 413 FCITIDQKSVENSIVTLRFRDTTEQKTLKIDE-ITKFIKEN 452


>gi|154274019|ref|XP_001537861.1| hypothetical protein HCAG_07283 [Ajellomyces capsulatus NAm1]
 gi|150415469|gb|EDN10822.1| hypothetical protein HCAG_07283 [Ajellomyces capsulatus NAm1]
          Length = 551

 Score = 92.9 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 47/249 (18%), Positives = 97/249 (38%), Gaps = 16/249 (6%)

Query: 247 RKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHL- 304
           + L +   L +   D SG        + I++T+ ++   +IK    +  + P  + + + 
Sbjct: 81  QVLLKGQMLDY--YDVSGCFILKPHSYFIWETIQNWFDDRIKKMGVKNCSFPLFVSEDVL 138

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
            ++  H + + A +  V  A ++ K  R  A++P +       +   ++S+R+LP+RL +
Sbjct: 139 KKEKDHIEGFAAEVAWVTHAGNS-KLERKIAIRPTSETVMYPYYAKWIRSHRDLPLRLNQ 197

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN-ECLKIHNLIISIYKDFGFEKI 423
           + SV R E        +R R F   + H     E     E L+I      +Y++     +
Sbjct: 198 WNSVVRWEFKNP-QPFLRTREFLWQEGHTAHLTEGGAREEVLQILEHYAHVYEELLAIPV 256

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           +    T  EK  G               ++    ++   I  G   G G  +   F   +
Sbjct: 257 IRGQKTEKEKFAGGLYTTT---------VEGYIPATGRGIQGGTSHGLGQNFSKMFGITV 307

Query: 484 KDAIGRDWQ 492
           +D   +  +
Sbjct: 308 EDPSAKPDE 316


>gi|115969223|ref|XP_001192584.1| PREDICTED: similar to Prolyl-tRNA synthetase
           (mitochondrial)(putative), partial [Strongylocentrotus
           purpuratus]
          Length = 185

 Score = 92.9 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 70/187 (37%), Gaps = 15/187 (8%)

Query: 273 WKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
            +  + LI  +  +++    ++I  P +    LW+ SG +  Y   +  ++   +     
Sbjct: 1   MRALEKLIKVIDTEMQKVGGQKIAMPGMTPSSLWKTSGRYSDYGPELITLQDRHNV---- 56

Query: 332 RTFALKPMNCPGHVAVFN-HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
             + L P +      +       S++ LP++L +  + +R+E     +GL+R R F   D
Sbjct: 57  -DYCLGPTHEEAVTDIVAGEKTLSHKRLPIKLYQITNKFRDEMRPR-YGLLRGREFLMKD 114

Query: 391 AHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKG 450
            + F   +       + +  +   Y+       +  +          D+  + AE   + 
Sbjct: 115 LYTF---DSNLEGAEETYRSVCEAYQRIFSILDLPIVQDLYTF----DSNLEGAEETYRS 167

Query: 451 VLDTIKN 457
           V +  + 
Sbjct: 168 VCEAYQR 174


>gi|13508093|ref|NP_110042.1| glycyl-tRNA synthetase [Mycoplasma pneumoniae M129]
 gi|2500997|sp|P75425|SYG_MYCPN RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|1674173|gb|AAB96130.1| glycyl-tRNA synthetase [Mycoplasma pneumoniae M129]
 gi|301633466|gb|ADK87020.1| glycine--tRNA ligase [Mycoplasma pneumoniae FH]
          Length = 449

 Score = 92.9 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 82/472 (17%), Positives = 151/472 (31%), Gaps = 99/472 (20%)

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR---K 286
               Y   +     + +  + +  +L+      +    +   G  + Q + + +     K
Sbjct: 1   MAQVYSQEVYVQYLKRYGFVFQSSELY---NGLANSWDFGPLGAVLKQQIKTALYNFFIK 57

Query: 287 IKDDYEEINTPQVLDQHLWQQSGHWDSYRANM---------FAVKCADDTIKDLRTFALK 337
            K D   I+TP +L++ +W+ SGH  ++   +         F V   D+ IK    +  K
Sbjct: 58  NKRDVLLIDTPIILNEQIWKASGHLANFTDALVDCKSCKLRFRVDHLDEQIKSATQWNPK 117

Query: 338 PMNCP---------------------------------------GHVAVFNHGLKSYRE- 357
            +NCP                                       G    F   L+  +  
Sbjct: 118 QVNCPNCKANNWSEVRDFNLLFQTEIGVVNSEKRLVYLRPETAQGIFINFKQLLQLKKRP 177

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP  +A+FG  +RNE +   + L RVR F Q +   FC  +        +          
Sbjct: 178 LPFGVAQFGKSFRNEVTPG-NFLFRVREFEQFEMEWFCNPQASL----SVFESQQQAIAH 232

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           F F+ + +  +   +     + L   A    K V    +     R   G L   G F   
Sbjct: 233 FLFKVLQLNPALVKQYEYDKNEL---AHYANKTVDFLFQFPHGLRELWG-LADRGTFD-- 286

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
                             ++       +   F+   ++E   P ++  +V   IER    
Sbjct: 287 ------------------LEQHQKYAKKPLDFFDGENNEHFIPAVVEPSV--GIERLFYA 326

Query: 538 MI------ENFKGNL------PLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD 585
           +I      E  +G +      P  L P Q +V  + +   E AQ +   L   H  I   
Sbjct: 327 LIVSSYQQEQLEGEMREVLRLPFHLCPEQIVVLPLVNKLKETAQTLFEALSQTHWRIGF- 385

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
               +I  + R+         I    +   ++++ IR   S    +V + + 
Sbjct: 386 ESAGSIGKRYRKADAIGTKFAITFDFESLEDQAVTIRERDSLKQVRVPIKEL 437


>gi|169351083|ref|ZP_02868021.1| hypothetical protein CLOSPI_01862 [Clostridium spiroforme DSM 1552]
 gi|169292145|gb|EDS74278.1| hypothetical protein CLOSPI_01862 [Clostridium spiroforme DSM 1552]
          Length = 457

 Score = 92.5 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 56/391 (14%), Positives = 134/391 (34%), Gaps = 59/391 (15%)

Query: 269 HRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTI 328
           H +GW   +T+ +Y++        +I  P     +          +   M  V+ A  T+
Sbjct: 112 HSEGWTSEETV-NYIKEH------QIVCPNCGKSNFTDVRQFKLMFETKMGVVEDAKSTV 164

Query: 329 KDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
                  L+P    G    F +  ++  +++P  + + G  +RNE +   + + R+R F 
Sbjct: 165 ------YLRPETAQGIFVNFKNIQRTTRKKVPFGIGQIGKAFRNEITPG-NFIFRMREFE 217

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENI 447
           Q +   FC             +      KD G +   ++     ++ +            
Sbjct: 218 QMELEFFCKPGTDLEWFEYWKDYCKKFLKDLGIKDENLRFRDHEKEEL------------ 265

Query: 448 MKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFN 507
                 +  +     +      G G  +G   +    D          +    N   +  
Sbjct: 266 ------SFYSKGTCDVEYNFPFGWGELWGIA-DRTDYD----------LTQHQNHSKKSL 308

Query: 508 AFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK------------GNLPLWLSPIQA 555
            +   + +EK  P +I     G+   F+ ++ ++++              L   L+P + 
Sbjct: 309 EYLDPTTNEKYIPYVIE-PSVGADRLFLSVLCDSYEEETLEDGETRVVMKLLPALAPYKV 367

Query: 556 IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEAS 615
            +  +T    + A E+ ++L + H S E D   + I  + R       P  +        
Sbjct: 368 AILPLTKKQSDKASEVYSML-AKHFSCEFDVAGQ-IGKRYRRQDAIGTPFCVTVDFDTLE 425

Query: 616 ERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           + ++ +R   +    ++ + + +  ++K+ +
Sbjct: 426 DNTVTVRDRDTMEQIRLPIDELVDYISKKVM 456


>gi|119184159|ref|XP_001243013.1| hypothetical protein CIMG_06909 [Coccidioides immitis RS]
          Length = 668

 Score = 92.5 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 36/222 (16%), Positives = 80/222 (36%), Gaps = 11/222 (4%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
            I +  +G+      G ++ + L + + + ++     ++    +  Q LW+ SG      
Sbjct: 70  FIRQAYAGIYHLLPLGLRVQKKLENLIDKHMESLGASKLFLSALSSQLLWKLSGRL-HDD 128

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
           + +F      +       F L P +      +      SY+ELP+R+ +    YR+E   
Sbjct: 129 SEVFRFLDRKNAP-----FLLAPTHEEEITKLVGGLTNSYKELPLRVYQISRKYRDERRP 183

Query: 376 SLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              GL+R R F   D + F  + E+       +    + ++ +     I+    +     
Sbjct: 184 R-QGLLRAREFLMKDLYTFDYSTEEAMKSYNSVKEAYVRLFDELKLPYIVAAADSGSMGG 242

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
             +     ++      V+   K +   + N  V  G  + + 
Sbjct: 243 SLNHEFHLESSKGEDIVVSCSKCNY--KFNEEVTDGHASKFA 282



 Score = 54.8 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/142 (21%), Positives = 64/142 (45%), Gaps = 13/142 (9%)

Query: 508 AFYVNSHSEKCHP---VMIHRAVFGS-IERFIG----IMIENFKGNLPLWLSPIQAIVTT 559
           A   N+   K  P   V +    +G  + R I     I+ ++   N P  ++P  AI+  
Sbjct: 517 AKSGNADGAKESPKSVVPLQMGCYGIGVSRMIAAVADILADSRGLNWPRAMAPFSAIIVP 576

Query: 560 ITSSAVEYAQEIANLLKS-HHLSIE--TDFRNETINYKIREHSIKKIPIIIICGDKEASE 616
             +   + +++I + + S H+ SI+   D R + +  K+++  +  IP+I + G      
Sbjct: 577 GLAFQED-SKKIYDHIASYHNGSIDTILDDREQPLIRKLKDADLTGIPVICVVGKSWERH 635

Query: 617 RSIGIR-RFGSTTTQKVSLLDA 637
           R++ ++ R  +     VSL + 
Sbjct: 636 RNVEVQCRRLNNLRTDVSLDEL 657


>gi|268567756|ref|XP_002647865.1| Hypothetical protein CBG23664 [Caenorhabditis briggsae]
 gi|187040879|emb|CAP20462.1| hypothetical protein CBG_23664 [Caenorhabditis briggsae AF16]
          Length = 265

 Score = 92.5 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 65/198 (32%), Gaps = 13/198 (6%)

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDL---FHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
             L +   ++         K      L     I     G       G ++   L   +  
Sbjct: 4   PMLHKAKKWILSGATAPASKSVAHRMLIENGFILPTAKGFYSLLPLGQRVIDKLCRILDS 63

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           + ++    ++  P V  + LW ++  W++  + M   +      +      L+P      
Sbjct: 64  EFQNSGAMKVGMPIVGTKQLWDRTRRWEAMGSEMLKFED-----RQKAQLCLQPTAEEMC 118

Query: 345 VAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE 403
             +          +LPV L + G  +R+E +    GLMR R F   D + F    +   +
Sbjct: 119 TDLIAQLSPLKKSQLPVMLYQIGEKFRDEMNPRF-GLMRARQFLMKDMYSFALDSESSQK 177

Query: 404 CLKIHNLIISIYKDFGFE 421
                + +    + FG +
Sbjct: 178 TYHNISNVYD--RIFGEQ 193


>gi|50365084|ref|YP_053509.1| glycyl-tRNA synthetase [Mesoplasma florum L1]
 gi|59798529|sp|Q6F1J8|SYG_MESFL RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|50363640|gb|AAT75625.1| glycyl-tRNA synthetase [Mesoplasma florum L1]
          Length = 451

 Score = 92.5 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 52/384 (13%), Positives = 108/384 (28%), Gaps = 57/384 (14%)

Query: 272 GWKIFQTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
           G      +  ++R       + I  P+       Q       ++ N   ++       + 
Sbjct: 109 GVMTENQMEEFIRE------QNIKCPKCQACDFTQIRKFALMFKTNQGVLED------ES 156

Query: 332 RTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
            +  L+P    G    F +  +S  ++LP  + + G  +RNE +   + + R R F Q +
Sbjct: 157 SSVYLRPETAQGIFINFKNAQRSLRKKLPFGIGQIGKSFRNEITPG-NFIFRTREFEQME 215

Query: 391 AHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKG 450
              F              +       +            +   RV S    + A      
Sbjct: 216 LEFFFNPSDEK-------DWFSYWLNEVETFLQDKIQINKENYRVRSHEKDELAHYSTAT 268

Query: 451 VLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFY 510
                K         GV           F+                       S+ +  Y
Sbjct: 269 SDIEFKFPFGWGELWGVAHRG------NFDLNA----------------HQEASKQDLTY 306

Query: 511 VNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK------------GNLPLWLSPIQAIVT 558
           ++  + +     +     G     + I+ + +               LP  L+P Q  V 
Sbjct: 307 LDPTTNQKVLPHVIEPSVGVERMMLAILWQAYHEEDLGEGNSRIVMKLPYNLAPYQIAVM 366

Query: 559 TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERS 618
            +     + AQ + + L ++   +  D     +  + R       P +I          S
Sbjct: 367 PLQKQQNDQAQALYSNLLNN-FDVTYDETGN-VGKRYRRQDAIGTPFVITVDFDTPETNS 424

Query: 619 IGIRRFGSTTTQKVSLLDAIPILT 642
           + +R   S    +++L +    L 
Sbjct: 425 VTVRERDSMEQVRINLDELEAYLK 448


>gi|225570967|ref|ZP_03779990.1| hypothetical protein CLOHYLEM_07071 [Clostridium hylemonae DSM
           15053]
 gi|225160429|gb|EEG73048.1| hypothetical protein CLOHYLEM_07071 [Clostridium hylemonae DSM
           15053]
          Length = 473

 Score = 92.5 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 64/461 (13%), Positives = 136/461 (29%), Gaps = 59/461 (12%)

Query: 199 KLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI 258
               V  A+W+        +   G           ++         D     +E      
Sbjct: 52  LKNNVKRAWWQKFVQESPYN--VGVDCAILMNPQTWVASGHLGGFSDPLMDCKECHER-F 108

Query: 259 AEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDY---EEINTPQVLDQHLWQQSGHWDSYR 315
             D     F H  G  I  ++  +   +++  Y    E+  P     +  +         
Sbjct: 109 RADKMIEDFAHANGLDIGDSIDGWSHEQMEA-YIKEHEVPCPTCGKHNFTEIREF----- 162

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    F +  + S +++P  + + G  +RNE +
Sbjct: 163 -NLMFKTFQGVTEDAKSVVYLRPETAQGIFVNFKNVQRTSRKKIPFGICQVGKSFRNEIT 221

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              +   R R F Q +   FC                ++  +  G +   V+      + 
Sbjct: 222 PG-NFTFRTREFEQMELEFFCEPGTDLEWFNYWKKFCLNWLETLGLKDDEVRYRDHSPEE 280

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           +   + + +A                  I      G G  +G             D    
Sbjct: 281 L---SHYSNATT---------------DIEYLFPFGWGELWGVA-----------DRTNY 311

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM--------IENFKG-- 544
            +    N+  +  +++ +   EK  P +I     G+    +  +        +E      
Sbjct: 312 DLTQHQNVSKQDMSYFDDEKKEKYIPYVIE-PSLGADRMVLAFLCSAYDEEELEGGDMRT 370

Query: 545 --NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
             +    L+PI+  V  ++    E A+++   L S   + E D R   I  + R      
Sbjct: 371 VLHFHPALAPIKVGVLPLSKKLNEGAEKVYAQL-SRKYNCEFDDRGN-IGKRYRRQDEIG 428

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            P  +    +   + ++ +R   +   ++V + +      K
Sbjct: 429 TPFCVTYDFESEEDGAVTVRDRDTMEQERVKIEELESYFAK 469


>gi|320162939|gb|EFW39838.1| prolyl-tRNA synthetase [Capsaspora owczarzaki ATCC 30864]
          Length = 788

 Score = 92.2 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 66/186 (35%), Gaps = 8/186 (4%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRA 316
           + +  +G+      G +  + +   +  +++    +    P ++ + LW ++G W S   
Sbjct: 154 MVQHAAGIYALTPVGLRALENVTRIICEELELVGAQRTALPMLMTKELWDKTGRWTSSGQ 213

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
            +F ++      +  R   L P +      +         + P+ L +    +R+E    
Sbjct: 214 EVFRLQD-----RKGRDMLLGPTHEEAVCELAATKPLGRGQFPLMLYQLDRKFRDEARPR 268

Query: 377 LHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
            HGLMR R F   D + F    E        I  +   I+   G + +  +  T     V
Sbjct: 269 -HGLMRGREFWMKDLYTFDVDIEHAAKTYDTICGVYGRIFDRLGLDYVRAEADTGNIGGV 327

Query: 436 GSDALW 441
            S    
Sbjct: 328 RSHEFH 333


>gi|320031958|gb|EFW13915.1| prolyl-tRNA synthetase [Coccidioides posadasii str. Silveira]
          Length = 668

 Score = 92.2 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/171 (19%), Positives = 66/171 (38%), Gaps = 11/171 (6%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
            I +  +G+      G ++ + L + + + ++     ++    +  Q LW+ SG      
Sbjct: 70  FIRQAYAGIYHLLPLGLRVQKKLENLIDKHMESLGASKLFLSALSSQLLWKLSGRL-HDD 128

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
           + +F      +       F L P +      +      SY+ELP+R+ +    YR+E   
Sbjct: 129 SEVFRFLDRKNAP-----FLLAPTHEEEITKLVGGLTNSYKELPLRVYQISRKYRDERRP 183

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK 426
              GL+R R F   D + F   +    E +K +N +   Y     E  +  
Sbjct: 184 R-QGLLRAREFLMKDLYTF---DYSTEEAMKSYNSVKEAYVRLFDELKLPY 230



 Score = 56.3 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/142 (22%), Positives = 65/142 (45%), Gaps = 13/142 (9%)

Query: 508 AFYVNSHSEKCHP---VMIHRAVFGS-IERFIG----IMIENFKGNLPLWLSPIQAIVTT 559
           A  VN+   K  P   V +    +G  + R I     I+ ++   N P  ++P  AI+  
Sbjct: 517 AKSVNADGAKESPKSVVPLQMGCYGIGVSRMIAAVADILADSRGLNWPRAMAPFSAIIVP 576

Query: 560 ITSSAVEYAQEIANLLKS-HHLSIE--TDFRNETINYKIREHSIKKIPIIIICGDKEASE 616
             +   + +++I + + S H+ SI+   D R + +  K+++  +  IP+I + G      
Sbjct: 577 GLAFQED-SKKIYDHIASYHNGSIDTILDDREQPLIRKLKDADLTGIPVICVVGKSWERH 635

Query: 617 RSIGIR-RFGSTTTQKVSLLDA 637
           R++ ++ R  +     VSL + 
Sbjct: 636 RNVEVQCRRLNNLRTDVSLDEL 657


>gi|311265228|ref|XP_003130565.1| PREDICTED: LOW QUALITY PROTEIN: bifunctional aminoacyl-tRNA
            synthetase [Sus scrofa]
          Length = 1432

 Score = 92.2 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 49/263 (18%), Positives = 99/263 (37%), Gaps = 15/263 (5%)

Query: 227  TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
             +Q         EE+    + ++  + ++     D SG        + I++++  +   +
Sbjct: 1007 KKQTRLGLEAKKEENLADWYSQVITKSEMIEY-YDVSGCYILRPWAYSIWESIKDFFDAE 1065

Query: 287  IKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
            IK    E    P  + Q   + +  H   +   +  V  +  T       A++P +    
Sbjct: 1066 IKKLGVENCYFPMFVSQGALETEKTHIADFAPEVAWVTRSGKTEL-AEPIAVRPTSETVM 1124

Query: 345  VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFNE 403
               +   ++S+R+LP+RL ++ +V R E        +R R F   + H  F T E+   E
Sbjct: 1125 YPAYAKWVQSHRDLPIRLNQWCNVVRWEFKHP-QPFLRTREFLWQEGHSAFATFEEAAEE 1183

Query: 404  CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             L+I +L   +Y++     ++    T  EK  G D             ++   ++S   I
Sbjct: 1184 VLQILDLYAQVYEELLAIPVVKGRKTEKEKFAGGDYTTT---------VEAFISASGRAI 1234

Query: 464  NTGVLLGEGAFYGPKFEYILKDA 486
                    G  +   FE + +D 
Sbjct: 1235 QGATSHHLGQNFSKMFEIVFEDP 1257


>gi|145640808|ref|ZP_01796390.1| prolyl-tRNA synthetase [Haemophilus influenzae R3021]
 gi|145274322|gb|EDK14186.1| prolyl-tRNA synthetase [Haemophilus influenzae 22.4-21]
          Length = 430

 Score = 92.2 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 63/168 (37%), Gaps = 14/168 (8%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFK 543
           I R  + G I Q+         A       +   P+++    +G  + R +   IE +  
Sbjct: 261 IKRGIEVGHIFQLGKKYSEAMKATVQGEDGK---PLVMTMGCYGIGVTRVVASAIEQHHD 317

Query: 544 GNLPLWL----SPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
               +W     +P    +  +    + S  +YA+E+   L+S  + +  D R E      
Sbjct: 318 DRGIIWPSDEIAPFTVAIVPMNMHKSESVQKYAEELYRTLQSQGVDVIFDDRKERPGVMF 377

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +  +  +P ++I G+K      I  +   +   + +S    + +L +
Sbjct: 378 ADMELIGVPHMVIIGEKNLDNGEIEYKNRRTGEKEMISKDQLLSVLNE 425



 Score = 44.0 bits (102), Expect = 0.087,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 57/178 (32%), Gaps = 7/178 (3%)

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              G+MR R F   DA+ F T ++   E    ++ +  +I+   G +   V+  T     
Sbjct: 3   PRFGVMRSREFIMKDAYSFHTTQESLQETYDVMYQVYSNIFNRLGLDFRAVQADTGSIGG 62

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
             S      A +    V+ + ++     I     +  G    P  E  L D         
Sbjct: 63  SASHEFQVLASSGEDDVVFSTESDFAANIELAEAVAIGERQAPTAEMCLVDT-PNAKTIA 121

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
            +   FNLP       +       +  ++   + G  E     + E      PL   P
Sbjct: 122 ELVEQFNLPIEKTVKTLIVKGADENQPLVALIIRGDHE-----LNEIKAQKHPLVADP 174


>gi|281355646|ref|ZP_06242140.1| glycyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548]
 gi|281318526|gb|EFB02546.1| glycyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548]
          Length = 445

 Score = 92.2 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 67/444 (15%), Positives = 138/444 (31%), Gaps = 72/444 (16%)

Query: 251 REMDLFHIAEDGSGVI-FW--HRKGWKIFQTLISYMRRKIKDDYEEIN---TPQVLDQHL 304
           R   +F  +E   G+  FW     G ++ + + +    ++ +  + +    +  +    +
Sbjct: 21  RRGFIFPSSEIYGGINGFWDYGPYGARMKRAIENLWWHEMVETRDNVEGLDSTIICHPRV 80

Query: 305 WQQSGHWDSYRANMFAVK-------------------CADDTIKDLRTF------ALKPM 339
           W+ SGH D +   M   K                   C    + + R F       + P+
Sbjct: 81  WKASGHLDQFSDLMTDCKKCKSRYRVDQMADPTTCPNCGSKDLTEPREFNLMMKTFVGPV 140

Query: 340 NCPGHVAVFNH-------------GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
               H A                  + + ++LP  +A+ G  +RNE +   +   R R F
Sbjct: 141 FDEEHTAWLRAETCQPIFVDFHSVRVATRQKLPFGIAQIGKAFRNEINPR-NFTFRSREF 199

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
           TQ +   FC  E+                +         K   +         + +   +
Sbjct: 200 TQMEMEFFCDGEEGME-----WFEYWKQQRI-----NYYKNKLKFSDDFFRIYVHEKLAH 249

Query: 447 IMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF 506
             K  +D      + +   G    EG  +   ++         ++    +Q   +  SR 
Sbjct: 250 YAKAAIDI-----EVKFPFGWGELEGVHHRGTWDL----TRHSEFSGEDLQYMDHDNSRK 300

Query: 507 NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK------GNLPLWLSPIQAIVTTI 560
               V   S      M+        E       E          +LP  ++PIQ  V  +
Sbjct: 301 LMPTVIETSVGLDRTMLALLCRAYDEEKAATAKEGMDEDTRVVLHLPPLVAPIQVAVLPL 360

Query: 561 TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
           +    E A  +   +   H   E D    ++  + R       P  +      A++ ++ 
Sbjct: 361 SKKLKEPAYALYKEI-DRHFRCEYDETG-SVGKRYRRQDEIGTPFSVTFDFDSANDNAVT 418

Query: 621 IRRFGSTTTQKVSLLDAIPILTKE 644
           +R   +   ++V++      L K+
Sbjct: 419 VRNRDTMEQERVNVTQLRDYLEKQ 442


>gi|54020011|ref|YP_115575.1| glycyl-tRNA synthetase [Mycoplasma hyopneumoniae 232]
 gi|53987184|gb|AAV27385.1| glycyl-tRNA synthetase [Mycoplasma hyopneumoniae 232]
 gi|312601026|gb|ADQ90281.1| Glycyl-tRNA synthetase [Mycoplasma hyopneumoniae 168]
          Length = 455

 Score = 91.8 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 60/341 (17%), Positives = 112/341 (32%), Gaps = 43/341 (12%)

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEP 373
           + N+           +     L+P    G    F + L++    LP+ +A+ G  +RNE 
Sbjct: 144 KFNLLFPTYQGIIEDEKTLLYLRPETAQGIFINFKNLLRTTKNSLPLIIAQVGKSFRNEI 203

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
           S   + + R R F Q +  +F   +Q  N        I +  K  GF +  ++L+     
Sbjct: 204 SPG-NFIFRTREFVQLELEIFLKPDQSENFFQNEIEKIKNFLKKLGFARNSIRLNYH--- 259

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
                      E +      T+          G L+G  +  G   +Y LK+   +  + 
Sbjct: 260 ---------KKEKLAHYAKATVDFEYNFNFGWGELIG-ISNRG---DYDLKNHSEKSGE- 305

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE---------NFKG 544
                           +V+S + K     I     G     + ++ E          +  
Sbjct: 306 -------------KLEFVDSATGKKFLPHIIEPSMGLDRLMLAVLEECFCFDSVKNRYFL 352

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
            LP  LSP +  V  +       A++I   L S  +S        +I  +     +    
Sbjct: 353 KLPFILSPYKVAVLPLLKKFNFLAEKIWKELISQKISATLVTSG-SIGKRYYHQDVIGTY 411

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
             I    K      + +R   +T  + + + + I    KE+
Sbjct: 412 FCITIDQKSVENSIVTLRFRDTTEQKTLKIDE-ITKFIKEN 451


>gi|159131195|gb|EDP56308.1| prolyl-tRNA synthetase [Aspergillus fumigatus A1163]
          Length = 584

 Score = 91.8 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 42/187 (22%), Positives = 74/187 (39%), Gaps = 23/187 (12%)

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQV 299
            ++  +  L R   L    +  SG+      G ++ + L   + + ++     +++   +
Sbjct: 15  EKEDANELLIRGGFLR---QAYSGIFHMLPLGLRVQEKLERLIDKHMRSVGASKVSLSSI 71

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             Q LW+QSG                        F L P +      +     KSYR+LP
Sbjct: 72  SSQELWEQSGRL---------------KEGSESRFLLAPTHEEEITTLVGSLTKSYRDLP 116

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+ +    YR+EP     GL+R R F   D + F   +    E LK +NL+ + YK+  
Sbjct: 117 LRVYQISRKYRDEPRPR-QGLLRGREFLMKDLYTF---DYSVEEALKTYNLVKAAYKNLF 172

Query: 420 FEKIMVK 426
            E  +  
Sbjct: 173 DELKIPY 179



 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/104 (17%), Positives = 47/104 (45%), Gaps = 5/104 (4%)

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHL---SIETDFRNETINYK 594
           + ++   N P  ++P + +V        E A+++ + L S+H        D R++ + +K
Sbjct: 471 LSDSKGLNWPRAMAPYEVVVVPGRGLETE-AEKVYDSLVSNHTSSVDAILDDRDKPMGWK 529

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIR-RFGSTTTQKVSLLDA 637
           + +  +   P+I++ G      +++ ++ R  +   + V L   
Sbjct: 530 LGDADLIGYPVIVVVGKGWKKAQTLEVQCRRLNNLREDVPLDQL 573


>gi|70995366|ref|XP_752440.1| prolyl-tRNA synthetase [Aspergillus fumigatus Af293]
 gi|66850075|gb|EAL90402.1| prolyl-tRNA synthetase [Aspergillus fumigatus Af293]
          Length = 584

 Score = 91.8 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 42/187 (22%), Positives = 74/187 (39%), Gaps = 23/187 (12%)

Query: 241 SEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQV 299
            ++  +  L R   L    +  SG+      G ++ + L   + + ++     +++   +
Sbjct: 15  EKEDANELLIRGGFLR---QAYSGIFHMLPLGLRVQEKLERLIDKHMRSVGASKVSLSSI 71

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
             Q LW+QSG                        F L P +      +     KSYR+LP
Sbjct: 72  SSQELWEQSGRL---------------KEGSESRFLLAPTHEEEITTLVGSLTKSYRDLP 116

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +R+ +    YR+EP     GL+R R F   D + F   +    E LK +NL+ + YK+  
Sbjct: 117 LRVYQISRKYRDEPRPR-QGLLRGREFLMKDLYTF---DYSVEEALKTYNLVKAAYKNLF 172

Query: 420 FEKIMVK 426
            E  +  
Sbjct: 173 DELKIPY 179



 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/104 (17%), Positives = 47/104 (45%), Gaps = 5/104 (4%)

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHL---SIETDFRNETINYK 594
           + ++   N P  ++P + +V        E A+++ + L S+H        D R++ + +K
Sbjct: 471 LSDSKGLNWPRAMAPYEVVVVPGKGLETE-AEKVYDSLVSNHTSSVDAILDDRDKPMGWK 529

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIR-RFGSTTTQKVSLLDA 637
           + +  +   P+I++ G      +++ ++ R  +   + V L   
Sbjct: 530 LGDADLIGYPVIVVVGKGWKKAQTLEVQCRRLNNLREDVPLDQL 573


>gi|325843420|ref|ZP_08167978.1| glycine--tRNA ligase [Turicibacter sp. HGF1]
 gi|325489342|gb|EGC91716.1| glycine--tRNA ligase [Turicibacter sp. HGF1]
          Length = 457

 Score = 91.8 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 46/342 (13%), Positives = 102/342 (29%), Gaps = 50/342 (14%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPS 374
             +           +     L+P    G    F +  + S +++P  + + G  +RNE +
Sbjct: 146 FELMFKTHMGVVSDEKSAVYLRPETAQGIFVNFKNVQRTSRKKIPFGIGQIGKSFRNEIT 205

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              +   R R F Q +   FC   +             +     G     ++      + 
Sbjct: 206 PG-NFTFRTREFEQMELEFFCKPGEDAKWYEFWKEYCWNWLVSLGMNPEHIRQREHSPEE 264

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK--FEYILKDAIGRDWQ 492
           +                  +  ++    I      G G  +G     ++ LK  +     
Sbjct: 265 L------------------SHYSNGTSDIEYRFPFGWGELWGVANRTDFDLKAHMKESGA 306

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK--------- 543
               Q               + +EK  P  I     G+    +  +++ +          
Sbjct: 307 NFEYQ-------------DPTTNEKYVPYCIE-PSVGADRVTLAFLVDAYAEETLENGET 352

Query: 544 ---GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
                    L+P +  V  +     E A E+   L  H + ++ D    TI  + R    
Sbjct: 353 REVLKFHPALAPYKVAVLPLVKKLNEQALEVFADLSKH-MMVDYDEAG-TIGKRYRRQDA 410

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
              P  +I       ++ + +R   +   ++V++ + +  +T
Sbjct: 411 IGTPFCVIFDYDSLEDKKVTVRHRDTMEQERVAIDELVEYIT 452


>gi|332982910|ref|YP_004464351.1| uridine kinase [Mahella australiensis 50-1 BON]
 gi|332700588|gb|AEE97529.1| uridine kinase [Mahella australiensis 50-1 BON]
          Length = 495

 Score = 91.8 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 35/157 (22%), Positives = 64/157 (40%), Gaps = 1/157 (0%)

Query: 71  AVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEII 130
            +   + + I+A+AV  I P  ++ +   + +G Y +    +  S  E+AQ++K M E++
Sbjct: 10  RIYARTLSLILAKAVADIMPGCRLVVEHSLGNGQYCEIHGVKHISPSEIAQLKKHMTELV 69

Query: 131 ARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRS 190
             + P +++ +  ++A  LFE+  +     IL      + V++Y  G   D    P   S
Sbjct: 70  EANQPIIQEIIPRQQAIALFENIGKQETAHIL-RYRQVDKVSVYHLGNLIDYFYEPLFTS 128

Query: 191 TGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNT 227
           TGQ   F  L    G                 T    
Sbjct: 129 TGQANVFDLLPYPPGLILLYPKAGQPDKLPEFTDLPK 165


>gi|255527652|ref|ZP_05394512.1| glycyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|296186917|ref|ZP_06855318.1| glycyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|255508665|gb|EET85045.1| glycyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|296048631|gb|EFG88064.1| glycyl-tRNA synthetase [Clostridium carboxidivorans P7]
          Length = 463

 Score = 91.8 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 49/344 (14%), Positives = 109/344 (31%), Gaps = 47/344 (13%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    F +  + S +++P  + + G  +RNE +
Sbjct: 152 FNLMFKTYQGVTEDSKSEIHLRPETAQGIFVNFKNVQRTSRKKVPFGIGQIGKSFRNEIT 211

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              +   R R F Q +   FC                     D  +     +        
Sbjct: 212 PG-NFTFRTREFEQMELEFFCKP-----------------GTDLEWHSYWKEQCWNFLLN 253

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           +G +       +  K  L    N++ D I      G G  +G         A   D+   
Sbjct: 254 LGIEEKNIRFRDHDKEELSHYSNATSD-IEYLFPFGWGELWGV--------ADRTDYDLT 304

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK----------- 543
             Q         +  Y++  + + +         G+    +  +++ +            
Sbjct: 305 QHQNHSGK----DMSYLDPVTHEKYIPYCIEPSVGADRAVLAFLVDAYDEEELEGGDSRT 360

Query: 544 -GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
             +    ++P++A +  +T    E A+E+ + L+    ++E D    +I  + R      
Sbjct: 361 VMHFHPAIAPVKAAILPLTKKLSEKAEEVYDELRK-DFNVEYDEAG-SIGKRYRRQDEAG 418

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
            P  I        + ++ +R   +    ++ + + +    KE +
Sbjct: 419 TPYCITIDFDTLEDNTVTVRDRDTMDQFRMKVDE-LKKFIKEKM 461


>gi|253567819|ref|ZP_04845230.1| threonyl-tRNA synthetase [Bacteroides sp. 1_1_6]
 gi|251841892|gb|EES69972.1| threonyl-tRNA synthetase [Bacteroides sp. 1_1_6]
          Length = 82

 Score = 91.8 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 25/70 (35%), Positives = 38/70 (54%)

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           LK H +    D RNE I  KIR++ +K+IP ++I G+KEA    + +RR G      +  
Sbjct: 5   LKMHEIRAIVDDRNEKIGRKIRDNEMKRIPYMLIVGEKEAENGEVSVRRQGEGDKGTMKY 64

Query: 635 LDAIPILTKE 644
            +   IL +E
Sbjct: 65  EEFAKILNEE 74


>gi|167747156|ref|ZP_02419283.1| hypothetical protein ANACAC_01870 [Anaerostipes caccae DSM 14662]
 gi|317473640|ref|ZP_07932929.1| uridine kinase [Anaerostipes sp. 3_2_56FAA]
 gi|167654116|gb|EDR98245.1| hypothetical protein ANACAC_01870 [Anaerostipes caccae DSM 14662]
 gi|316898930|gb|EFV20955.1| uridine kinase [Anaerostipes sp. 3_2_56FAA]
          Length = 551

 Score = 91.8 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 39/239 (16%), Positives = 85/239 (35%), Gaps = 6/239 (2%)

Query: 12  GSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSL 70
           G+  +        ++A+   R  A   +      K+ +L   +  +  I  +T E+    
Sbjct: 8   GTKISVKEGTALEELAKRFQRPGAPVILLAYTGEKLRELHHTIDEDCDIRFVTNEEQTGY 67

Query: 71  AVIRHSCAHIMAEAVQSIWPEVQ---VAIGPIIEDGFYYDFDKEQPFSSDELA-QIEKKM 126
              + +   +  +A + +  E     + +   I +  + +F  +     D+LA +I+ KM
Sbjct: 68  MTYKRTVNFVFLKACEEVLGEGCTNRITMNYSIGNSTFCEFSLDDLKVDDDLARKIQNKM 127

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGP 186
           +E++ +D    K   +  +AR+ F  +    KV  L          +Y    + +   G 
Sbjct: 128 RELVRQDLKIKKISYNTFEARKRFAQQGMKEKVR-LFRFRRVSRTNVYSLDGYENYFYGY 186

Query: 187 HVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
              STG ++ F+      G   +      + S    T       + Q      +  + D
Sbjct: 187 MAPSTGYIQDFYVDAYQGGIVLQIPRRDHLHSVSRFTPQPKLFHVMQRSRSWSKLMRVD 245


>gi|166032677|ref|ZP_02235506.1| hypothetical protein DORFOR_02392 [Dorea formicigenerans ATCC
           27755]
 gi|166027034|gb|EDR45791.1| hypothetical protein DORFOR_02392 [Dorea formicigenerans ATCC
           27755]
          Length = 487

 Score = 91.8 bits (226), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 53/458 (11%), Positives = 131/458 (28%), Gaps = 50/458 (10%)

Query: 199 KLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI 258
               V  A+W+        +   G           ++         D     +E      
Sbjct: 63  LKNNVKKAWWQKFIQESPYN--VGVDCAILMNPQTWIASGHLGGFSDPLMDCKECHER-F 119

Query: 259 AEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEE--INTPQVLDQHLWQQSGHWDSYRA 316
             D     + H  G +I  ++  +   ++++  +E  +  P        +       ++ 
Sbjct: 120 RADKIIEDYAHEHGIEIGDSIDGWSHEQMENFIKENNVPCPTCGKHDFTEIREFNLMFKT 179

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPSG 375
                + A +T+       L+P    G    F +  + S +++P  + + G  +RNE + 
Sbjct: 180 FQGVTEDAKNTV------YLRPETAQGIFVNFKNVQRTSRKKIPFGIGQIGKSFRNEITP 233

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
             +   R R F Q +   FC  +             +      G +   V+     ++ +
Sbjct: 234 G-NFTFRTREFEQMELEFFCEPDTDLEWFAYWKKFCLDWLHTLGLKDEEVRYRDHDKEEL 292

Query: 436 GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG-AFYGPKFEYILKDAIGRDWQCG 494
              + +  A   +   L          I               K +    D   ++    
Sbjct: 293 ---SFYSKATTDI-EFLFPFGWGELWGIADRTDYDLTQHMNVSKQDLTYFDDEKKEKYTP 348

Query: 495 TIQVDFNLPSR---------FNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
            +        R         ++   + +  +     ++H                     
Sbjct: 349 YVIEPSLGADRVVLAFLCAAYDEENIGTEDKPDTRTVLH--------------------- 387

Query: 546 LPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPI 605
               L+P++  +  ++    E A+++   L +   + E D R   I  + R       P 
Sbjct: 388 FHPALAPVKIGILPLSKKLNEGAEKVYAQL-AKKYNCEFDDRGN-IGKRYRRQDEIGTPF 445

Query: 606 IIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +        + ++ +R   +   +++ + D      K
Sbjct: 446 CVTYDFDSEEDGAVTVRDRDTMEQERIKIEDLDAYFEK 483


>gi|167957340|ref|ZP_02544414.1| glycyl-tRNA synthetase [candidate division TM7 single-cell isolate
           TM7c]
          Length = 473

 Score = 91.8 bits (226), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 61/341 (17%), Positives = 110/341 (32%), Gaps = 50/341 (14%)

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEP 373
           R NM           D     L+P    G    F + + S Y  LP  +A+ G  +RNE 
Sbjct: 166 RFNMMFKTYVGAVTNDASISYLRPETAQGIFTNFKNVVDSFYPNLPFGIAQQGKAFRNEI 225

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
           +     + R R F Q +   F   E       ++     +   + G +   +        
Sbjct: 226 APR-DFVFRSREFEQMEIEYFVDPEHWQEAFDELLASTHAFLAELGLKPEHIH------- 277

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE-YILKDAIGRDWQ 492
                 L   AE+       TI       I    L+G    Y   F+   ++ A G+  +
Sbjct: 278 -----ELDVPAEDRAHYSKKTIDIEYDYPIGCEELMGIA--YRTDFDLMNIQRASGKSME 330

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI------ENFKGN- 545
                           + V   + K  P +I    FG     + ++       E      
Sbjct: 331 ----------------YTVKGTNTKFVPHVIE-PSFGVERALMAVLSGAYREDEQNGEKR 373

Query: 546 ----LPLWLSPIQAIV---TTITSSAVEYAQEIANLLKSHHL-SIETDFRNETINYKIRE 597
               LP  L+P++  V          VE A+E+   L   +   +  D  N  I  + R 
Sbjct: 374 VYLALPEHLAPVKFAVSPLLKNKPELVEKAREVYAQLAKANPGRVMWDD-NGNIGKRYRR 432

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
                 P  ++   +   + ++ +R   +T  ++V + + +
Sbjct: 433 QDEIGTPHCVVVDFQTLEDGTVTVRERDTTEQRRVKVEELL 473


>gi|261200038|ref|XP_002626420.1| prolyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
 gi|239594628|gb|EEQ77209.1| prolyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
          Length = 555

 Score = 91.8 bits (226), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 32/175 (18%), Positives = 66/175 (37%), Gaps = 9/175 (5%)

Query: 269 HRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
              G ++ + L   + + ++     +++   +  Q LW++SG       +    K  D  
Sbjct: 2   LPLGLRVQEKLERLVDKHMRTLGASKLSLSSISSQALWEKSGRLKK---DSEFFKFQD-- 56

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
            +    F L P +     ++    + SYR+LP+R+ +    YR+EP     GL+R R F 
Sbjct: 57  -RKEARFLLAPTHEEEITSLVAGAVNSYRDLPLRVYQISRKYRDEPRPR-QGLLRGREFI 114

Query: 388 QDDAHVFC-TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALW 441
             D + F  + E        +    I ++ +     ++    +       S    
Sbjct: 115 MKDLYTFDYSPETAIKTYSAVKKAYIRLFDELRIPYMIATADSGNMGGSLSHEFH 169



 Score = 63.6 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/125 (18%), Positives = 51/125 (40%), Gaps = 8/125 (6%)

Query: 520 PVMIHRAVFGSIERFIGI---MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLK 576
           P+ +     G       +   + ++   N P  ++P + I+        E A+ + + + 
Sbjct: 421 PLEMGCHGIGVSRMISAVADTLADSKGLNWPRAIAPFEVIIIPDKGLEGE-AERVYDDIN 479

Query: 577 SHHL---SIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR-RFGSTTTQKV 632
              +       D R+  I +K+R+  +   P+II+ G    +E  + ++ R  +   + V
Sbjct: 480 GRQIGAVDAIVDDRDRNIPWKLRDADLIGYPVIIVIGKSWKTENKLEVQCRRLNNLRETV 539

Query: 633 SLLDA 637
           SL D 
Sbjct: 540 SLQDL 544


>gi|239608018|gb|EEQ85005.1| prolyl-tRNA synthetase [Ajellomyces dermatitidis ER-3]
          Length = 555

 Score = 91.8 bits (226), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 32/175 (18%), Positives = 66/175 (37%), Gaps = 9/175 (5%)

Query: 269 HRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
              G ++ + L   + + ++     +++   +  Q LW++SG       +    K  D  
Sbjct: 2   LPLGLRVQEKLERLVDKHMRTLGASKLSLSSISSQALWEKSGRLKK---DSEFFKFQD-- 56

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
            +    F L P +     ++    + SYR+LP+R+ +    YR+EP     GL+R R F 
Sbjct: 57  -RKEARFLLAPTHEEEITSLVAGAVNSYRDLPLRVYQISRKYRDEPRPR-QGLLRGREFI 114

Query: 388 QDDAHVFC-TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALW 441
             D + F  + E        +    I ++ +     ++    +       S    
Sbjct: 115 MKDLYTFDYSPETAIKTYSAVKKAYIRLFDELRIPYMIATADSGNMGGSLSHEFH 169



 Score = 64.4 bits (155), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 23/125 (18%), Positives = 52/125 (41%), Gaps = 8/125 (6%)

Query: 520 PVMIHRAVFGSIERFIGI---MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLK 576
           P+ +     G       +   + ++   N P  ++P + I+        E A+ + + + 
Sbjct: 421 PLEMGCHGIGVSRMISAVADTLADSKGLNWPRAIAPFEVIIIPDKGLEGE-AERVYDDIN 479

Query: 577 SHHL---SIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR-RFGSTTTQKV 632
              +    +  D R+  I +K+R+  +   P+II+ G    +E  + ++ R  +   + V
Sbjct: 480 GRQIGAVDVIVDDRDRNIPWKLRDADLIGYPVIIVIGKSWKTENKLEVQCRRLNNLRETV 539

Query: 633 SLLDA 637
           SL D 
Sbjct: 540 SLQDL 544


>gi|238879629|gb|EEQ43267.1| conserved hypothetical protein [Candida albicans WO-1]
          Length = 575

 Score = 91.4 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 47/261 (18%), Positives = 92/261 (35%), Gaps = 29/261 (11%)

Query: 228 QQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI 287
           +    Q   F    +   H  L +   L +I    +G++ W + G  I   +   +R+++
Sbjct: 15  KSYGNQLSKFKYSKQIPTHEVLTK---LGYITYPRAGLVNWSKMGLLIQNKISQIIRQRM 71

Query: 288 KD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA 346
            +  +EE++   +  + LW+ +  WD         K   D       + L P        
Sbjct: 72  DEIQFEEVSLSLISHKELWKLTNRWDQ----EEIFKLVGD------EYLLVPTAEEEITN 121

Query: 347 VFN-HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
                 L+SY+  P+ L +    +RNE      GL+R + F   DA+ F   E    +  
Sbjct: 122 YVKKQFLESYKNFPLALYQINPKFRNEKRPR-GGLLRGKEFLMKDAYSFDLNESEAMKTY 180

Query: 406 -KIHNLIISIYKDFGFEKIMVKLST-----------RPEKRVGSDALWDDAENIMKGVLD 453
            K+      I++D G   +  +  +                 G D +++  E      ++
Sbjct: 181 EKVVGAYHKIFQDLGIPYVKAEADSGDIGGSLSHEWHYLNSSGEDTVFECNECHNVSNME 240

Query: 454 TIKNSSQDRINTGVLLGEGAF 474
               S    I+  + +    F
Sbjct: 241 KA-LSYPKEIDETIEVSVKYF 260



 Score = 44.0 bits (102), Expect = 0.075,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 47/114 (41%), Gaps = 19/114 (16%)

Query: 517 KCHPVMIHRAVFGSIERFIGIMIE----NFKGNLPLWLSPIQAIVTTITS---------- 562
           +   +M+     G I R I  + E          P  ++P +  V  ++           
Sbjct: 399 EKQRIMMGCYGIG-ISRIIAAIAEINRDEKGLKWPRSIAPWEVTVVEVSKQKQLKNVNDN 457

Query: 563 ----SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
               +  +  QEI N+L   ++    D R++++  K+++  +  IP+ II G++
Sbjct: 458 NHHNNPQDNFQEIYNILNQANIDYRLDNRSDSMGKKLKQSDLLGIPLSIILGNQ 511


>gi|258645533|ref|ZP_05733002.1| phosphoribulokinase family protein [Dialister invisus DSM 15470]
 gi|260402889|gb|EEW96436.1| phosphoribulokinase family protein [Dialister invisus DSM 15470]
          Length = 549

 Score = 91.4 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 38/208 (18%), Positives = 76/208 (36%), Gaps = 5/208 (2%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSL-AKKAVAVAINGKVCDLSDPVR-EGSIEII 62
           + +T   G        AT  ++   +S     + AV     G + D   P   +  ++ I
Sbjct: 1   MHITCE-GKAYELFEGATPQNLWNMVSGGRDPEMAVLADCEGDIIDFQTPFTGDTDVKWI 59

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPE-VQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
               P +    + S   ++A A + ++   ++VA+   +    Y +F         EL  
Sbjct: 60  PLGSPLAHRAYQRSLIMLLAIAAKEVYGGKIEVAVKHALGKALYCEFSDGHVPLQKELDV 119

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +  KM+EI+       +  +   KA      K      +++  +P KE +++ + G + D
Sbjct: 120 LRYKMEEIVKEGRDITQLTVGISKAEAFLRLKGRKADADLVTQMPVKE-ISVSQCGTFID 178

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWR 209
              GP +     +K F       G    
Sbjct: 179 YFFGPMLPDMSFLKIFHLSSYAPGFLLH 206


>gi|303320217|ref|XP_003070108.1| prolyl-tRNA synthetase, putative [Coccidioides posadasii C735 delta
           SOWgp]
 gi|240109794|gb|EER27963.1| prolyl-tRNA synthetase, putative [Coccidioides posadasii C735 delta
           SOWgp]
          Length = 668

 Score = 91.4 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 34/171 (19%), Positives = 65/171 (38%), Gaps = 11/171 (6%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
            I +  +G+      G ++ + L + + + ++     ++    +  Q LW+ SG      
Sbjct: 70  FIRQAYAGIYHLLPLGLRVQKKLENLIDKHMESLGASKLFLSALSSQLLWKLSGRL-HDD 128

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
           + +F              F L P +      +      SY+ELP+R+ +    YR+E   
Sbjct: 129 SEVFRFLDRKYAP-----FLLAPTHEEEITKLVGGLTNSYKELPLRVYQISRKYRDERRP 183

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK 426
              GL+R R F   D + F   +    E +K +N +   Y     E  +  
Sbjct: 184 R-QGLLRAREFLMKDLYTF---DYSTEEAMKSYNSVKEAYVRLFDELKLPY 230



 Score = 57.1 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/142 (22%), Positives = 64/142 (45%), Gaps = 13/142 (9%)

Query: 508 AFYVNSHSEKCHP---VMIHRAVFGS-IERFIG----IMIENFKGNLPLWLSPIQAIVTT 559
           A  VN+   K  P   V +    +G  + R I     I+ ++   N P  ++P  AI+  
Sbjct: 517 AKSVNADGAKESPKSVVPLQMGCYGIGVSRMIAAVADILADSRGLNWPRAMAPFSAIIVP 576

Query: 560 ITSSAVEYAQEIANLLKS-HHLSIE--TDFRNETINYKIREHSIKKIPIIIICGDKEASE 616
             +   + +++I + + S H+ SI+   D R   +  K+++  +  IP+I + G      
Sbjct: 577 GLAFQED-SKKIYDHIASYHNGSIDTILDDRERPLIRKLKDADLTGIPVICVVGKSWERH 635

Query: 617 RSIGIR-RFGSTTTQKVSLLDA 637
           R++ ++ R  +     VSL + 
Sbjct: 636 RNVEVQCRRLNNLRTDVSLDEL 657


>gi|308189914|ref|YP_003922845.1| glycine--tRNA ligase [Mycoplasma fermentans JER]
 gi|307624656|gb|ADN68961.1| glycine--tRNA ligase [Mycoplasma fermentans JER]
          Length = 446

 Score = 91.4 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 56/334 (16%), Positives = 100/334 (29%), Gaps = 53/334 (15%)

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR-ELPVRLAEFGSVYRNEP 373
           + N+        T +      L+P    G    F +  +S R +LP+ + + G  +RNE 
Sbjct: 146 KFNLMFETKQGVTEETKNKIYLRPETAQGIFVNFKNVQRSMRSKLPMGIGQVGKSFRNEV 205

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
           +   + + R R F Q +  VFC       E  K++   I   + F     + K + R  +
Sbjct: 206 TPG-NFIFRTREFEQMELEVFCHP----KEANKLYKYYIKKAEKFAEYLGLSKENVRIRE 260

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRI----NTGVLLGEGAFYGPKFEYILKDAIGR 489
               +     +       L          I    +  +     A  G   EY        
Sbjct: 261 HEKEELSHYSSGTSDIEYLFPFGWGELLGIANRTDYDLNAHMKA-TGENLEY-------- 311

Query: 490 DWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPL- 548
                   VD     +F  F +                 G     + I+I+++       
Sbjct: 312 --------VDPVTNEKFVPFVIE-------------PSIGLDRLMLAILIDSYDEEKLEK 350

Query: 549 -----------WLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
                       L+P Q  V  +     + A E+   L    LS+  D    +I  + R 
Sbjct: 351 DDSRVVLHLHKNLAPYQVAVLPLVKKLNDKATEVYEKLLKAGLSVTYDETG-SIGKRYRR 409

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
                 P  +        + ++ IR   S   + 
Sbjct: 410 QDAIGTPYCVTIDFDSLEKNTVTIRDRDSMKQKN 443


>gi|167759228|ref|ZP_02431355.1| hypothetical protein CLOSCI_01575 [Clostridium scindens ATCC 35704]
 gi|167663102|gb|EDS07232.1| hypothetical protein CLOSCI_01575 [Clostridium scindens ATCC 35704]
          Length = 482

 Score = 91.4 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 51/391 (13%), Positives = 118/391 (30%), Gaps = 56/391 (14%)

Query: 269 HRKGWKIFQTLISYMRRKIKDDY---EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD 325
           H  G  I  ++  +   +++  Y    E+  P     +  +          N+       
Sbjct: 128 HANGLDIADSIDGWSHEQMEA-YIKEHEVPCPSCGKHNFTEIREF------NLMFKTFQG 180

Query: 326 DTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPSGSLHGLMRVR 384
            T        L+P    G    F +  + S +++P  + + G  +RNE +   +   R R
Sbjct: 181 VTEDAKSVVYLRPETAQGIFVNFKNVQRTSRKKIPFGICQIGKSFRNEITPG-NFTFRTR 239

Query: 385 GFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
            F Q +   FC             +  ++  +  G +   V+      + +   + +  A
Sbjct: 240 EFEQMELEFFCEPGTDLEWFNYWKSFCLNWLETLGLKDDEVRYRDHSPEEL---SHYSKA 296

Query: 445 ENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPS 504
              +   L          I              + ++ L                    S
Sbjct: 297 TTDV-EFLFPFGWGELWGI------------ADRTDFDLT--------------QHQNTS 329

Query: 505 RFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI-----ENFKG-------NLPLWLSP 552
           + +  Y +   +  +   +     G+    +  +      E  +G       +    L+P
Sbjct: 330 KQDMSYFDDEKKAKYVPYVIEPSLGADRMVLAFLCSAYDEEELEGGDVRTVLHFHPALAP 389

Query: 553 IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
           I+  V  ++    E A+++   L     + E D R   I  + R       P  +    +
Sbjct: 390 IKIGVLPLSKKLNEGAEKVYAQLSKK-YNCEFDDRGN-IGKRYRRQDEIGTPFCVTYDFE 447

Query: 613 EASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              + ++ +R   +   +++ + D      K
Sbjct: 448 SEEDGAVTVRDRDTMEQERIKIEDLDAYFAK 478


>gi|169824587|ref|YP_001692198.1| glycyl-tRNA synthetase [Finegoldia magna ATCC 29328]
 gi|167831392|dbj|BAG08308.1| glycyl-tRNA synthetase [Finegoldia magna ATCC 29328]
          Length = 465

 Score = 91.4 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 54/336 (16%), Positives = 109/336 (32%), Gaps = 32/336 (9%)

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEP 373
           + N+        T  +     L+P    G    F +  + S +++P  + + G  +RNE 
Sbjct: 153 KFNLMFKTFQGVTEDNKSEIYLRPETAQGIFVNFKNVQRTSRKKVPFGIGQIGKSFRNEI 212

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
           +   + + R R F Q +   FC             N       + G  +  ++L    ++
Sbjct: 213 TPG-NFIFRTREFEQMELEFFCKPGTDLEWFDYWRNFCKEFLLNLGIREENLRLRDHSQE 271

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL-----LGEGAFYGPKFEYILKDAIG 488
            +   + +  A       L          I            EG+  G K EY+      
Sbjct: 272 EL---SFYSKATTDF-EYLFPFGWGELWGIADRTDYDLSKHSEGS--GEKLEYMDPTTNE 325

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPL 548
           +      I+    +   F +F  +++ E+       R V                  +  
Sbjct: 326 KYIPYC-IEPSVGVDRMFLSFLCDAYDEEQLEDNTTRTVL----------------KIHP 368

Query: 549 WLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIII 608
            L+  +  V  +T    + A EI N L + +     D    +I  + R       P  + 
Sbjct: 369 ALAAYKVAVLPLTKKLNDKAMEIYNEL-AKNFMTHFDDAG-SIGKRYRREDEAGTPYCVT 426

Query: 609 CGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
                  + ++ IR   S   +++++ + I  + KE
Sbjct: 427 IDFDTLEDNTVTIRDRDSMEQKRMTVEEIIEFVNKE 462


>gi|289809607|ref|ZP_06540236.1| hypothetical protein Salmonellaentericaenterica_36347 [Salmonella
           enterica subsp. enterica serovar Typhi str. AG3]
          Length = 70

 Score = 91.0 bits (224), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 36/66 (54%)

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           RNE I +KIREH+++++P +++CGDKE     + +R         + + D I  L +E  
Sbjct: 2   RNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTRRGKDLGSLDVNDVIEKLQQEIR 61

Query: 647 PPDCQK 652
               Q+
Sbjct: 62  SRSLQQ 67


>gi|193652458|ref|XP_001949601.1| PREDICTED: 39S ribosomal protein L39, mitochondrial-like
           [Acyrthosiphon pisum]
          Length = 341

 Score = 91.0 bits (224), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 47/241 (19%), Positives = 92/241 (38%), Gaps = 26/241 (10%)

Query: 21  ATGSDVAESISRSLAKKAVAVAING-KVCDLSDPVR-EGSIEI----ITPEDPRSLAVIR 74
           +T    A+ IS  L K++    I+   + D+  P+  +  +        P+         
Sbjct: 79  STPFHCAQHISEMLVKRSGLALIDETHLWDMHRPLESDCELTFMHAQYLPDPYHFNRAYW 138

Query: 75  HSCAHIMAEAVQSIW-----PEVQVAIGPIIEDG-FYYDFDK----EQPFSSDELAQIEK 124
            SC+ I+   +   +     P +     P ++ G F YD +     E   + +EL  +  
Sbjct: 139 RSCSLILGAVISKAFKTDIQPTLHSFPSPNVKSGSFVYDVELSNLPEWAPTENELRILSA 198

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPA---KENVTLYRQGEWFD 181
            M +   +   F +  +S E A ++F+     +K E + +I      + V LYR  +  +
Sbjct: 199 NMVKFAQKSYKFERLAVSEELALDIFQE--NKFKKEQVPNIAQQSIDKKVVLYRIDDHIE 256

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
           + RGP + +T  + +      +   +   D+    L R  G +      L  + Y L E 
Sbjct: 257 ISRGPMIGNTDLLGR----CSITAVHRL-DTKNGHLYRFQGVSLPVNIMLNHFAYSLLEQ 311

Query: 242 E 242
            
Sbjct: 312 R 312


>gi|323342095|ref|ZP_08082328.1| glycyl-tRNA synthetase beta subunit [Erysipelothrix rhusiopathiae
           ATCC 19414]
 gi|322464520|gb|EFY09713.1| glycyl-tRNA synthetase beta subunit [Erysipelothrix rhusiopathiae
           ATCC 19414]
          Length = 457

 Score = 91.0 bits (224), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 54/386 (13%), Positives = 111/386 (28%), Gaps = 51/386 (13%)

Query: 277 QTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDS------YRANMFAVKCADDTIKD 330
           + +  +   +I          ++  Q       +          + N+        T   
Sbjct: 102 KLIEEFSETEINAGVMSNEDMELYIQEHQIPCPNCGGHDFTNIRQFNLMFKTFQGVTEDT 161

Query: 331 LRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
                L+P    G    + +  +S  ++LP  +A+ G  +RNE +     + R R F Q 
Sbjct: 162 SNAIYLRPETAQGMFVNYRNVQRSMRKKLPFGIAQIGKSFRNEITPG-QFIFRTREFEQM 220

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMK 449
           +   F    +            +      G +   ++L          D L         
Sbjct: 221 ELEFFVKPGEDLEWYEYWKKFAMDWLIGLGIKPENLRLREH-----DEDEL--------- 266

Query: 450 GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAF 509
               +  +     I      G    +G         A   D+     Q      S+ +  
Sbjct: 267 ----SHYSKGTSDIEYRFPWGFDELWGI--------ADRTDYDLKQHQEH----SKVSME 310

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK-----------GNLPLWLSPIQAIVT 558
           Y++  + + +         G     + ++ E +             +    L+P Q  V 
Sbjct: 311 YLDPETNEKYIPYCVEPSLGVERLMLALICEAYDEEELENDTRVVMHFSPKLAPTQVCVL 370

Query: 559 TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERS 618
            ++    E A+EI + L              +I  + R       P  I        +  
Sbjct: 371 PLSKKLSEPAREIMHKL--MGSFACDFDETASIGKRYRRQDAIGTPFCITFDFDSLEDEK 428

Query: 619 IGIRRFGSTTTQKVSLLDAIPILTKE 644
           + +R   S    +VS+ +AI ++  E
Sbjct: 429 VTLRYRDSMEQVRVSVDEAIALMNAE 454


>gi|241958042|ref|XP_002421740.1| prolyl-tRNA synthetase, cytoplasmic, putative [Candida dubliniensis
           CD36]
 gi|223645085|emb|CAX39680.1| prolyl-tRNA synthetase, cytoplasmic, putative [Candida dubliniensis
           CD36]
          Length = 567

 Score = 91.0 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 49/261 (18%), Positives = 93/261 (35%), Gaps = 29/261 (11%)

Query: 228 QQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI 287
           +    Q   F    +   H  L +   L +I    +G++ W + G  I   +   +R+++
Sbjct: 15  KSYGNQLSKFKYSKQIPTHEVLTK---LGYITYPRAGLVNWSKMGLLIQNKINQIIRQRM 71

Query: 288 KD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA 346
            + ++EEI+   +  + LW+ +  WD         K   D       + L P        
Sbjct: 72  DEINFEEISLSLISHKDLWKLTNRWDQ----EEIFKLVGD------EYLLVPTAEEEITN 121

Query: 347 VFN-HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
                 L+SY+  PV L +    +RNE      GL+R + F   DA+ F   E    +  
Sbjct: 122 YVKKQFLESYKNFPVGLYQINPKFRNEKRPR-GGLLRGKEFLMKDAYSFDLNESEAMKTY 180

Query: 406 -KIHNLIISIYKDFGFEKIMVKLST-----------RPEKRVGSDALWDDAENIMKGVLD 453
            K+      I++D G   +  +  +                 G D +++  E      ++
Sbjct: 181 EKVVGAYHKIFQDLGIPYVKAEADSGDIGGSLSHEWHYLNSSGEDTVFECNECHNVSNME 240

Query: 454 TIKNSSQDRINTGVLLGEGAF 474
               S    I+  + +    F
Sbjct: 241 KA-LSYPKEIDETIDVSVKYF 260



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/112 (17%), Positives = 50/112 (44%), Gaps = 14/112 (12%)

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIMIE----NFKGNLPLWLSPIQAIVTTIT-------- 561
           ++ +   +M+     G I R I  + E          P  ++P +  +  ++        
Sbjct: 396 NNIEKQRIMMGCYGIG-ISRIIAAIAEINRDEKGLKWPRSIAPWEVTIVEVSQQKQSTND 454

Query: 562 -SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
             +  E  +E+ N+L   ++    D R++++  K+++ ++  IP+ II G++
Sbjct: 455 NDNPQENFKEVYNILNEANIDYRLDNRSDSMGKKLKQSNLIGIPLSIILGNQ 506


>gi|227874495|ref|ZP_03992668.1| glycine--tRNA ligase [Oribacterium sinus F0268]
 gi|227839661|gb|EEJ50118.1| glycine--tRNA ligase [Oribacterium sinus F0268]
          Length = 428

 Score = 91.0 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 49/378 (12%), Positives = 107/378 (28%), Gaps = 46/378 (12%)

Query: 279 LISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKP 338
           L   +    K++ E   +   +      +       + N+        T     T  L+P
Sbjct: 80  LEGSVDAWSKEEMENFISSHEVPCPSCGKHNFTPIRQFNLMFKTFQGVTEDAKNTVYLRP 139

Query: 339 MNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK 397
               G    F +  +S  ++LP  +A+ G  +RNE +   +   R R F Q +   FC  
Sbjct: 140 ETAQGIFVNFKNVQRSSRKKLPFGIAQIGKSFRNEITPG-NFTFRTREFEQMELEFFCKP 198

Query: 398 EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKN 457
           +          +       + G +  M++        +   + +  A   +         
Sbjct: 199 DTDLEWFHYWKDYCQKWLLNLGMKPEMLRARDHEAAEL---SFYSKATTDL-----EFLF 250

Query: 458 SSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK 517
                   G+            +    D    +   G            +  Y +    +
Sbjct: 251 PFGWGELWGIA-----------DRTNYDLSRHEEVSGQ-----------DMKYFDDEINE 288

Query: 518 CHPVMIHRAVFGSIERFIGIMI------------ENFKGNLPLWLSPIQAIVTTITSSAV 565
            +   +     G+    +  +             E         L+PI+  V  +     
Sbjct: 289 HYLPYVVEPSLGADRVTLAFLCAAYDVEELEGGDERTVLRFHPALAPIKIGVLPLAKKLG 348

Query: 566 EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
           E A++I   L  +    E D R   I  + R       P  +    +   + ++ +R   
Sbjct: 349 EGAEKIHEELSKY-WMCEYDDRGN-IGKRYRRQDEIGTPYCVTYDFQSEEDHAVTVRERD 406

Query: 626 STTTQKVSLLDAIPILTK 643
           S    ++ + +      +
Sbjct: 407 SMEQVRIPISELQAYFAE 424


>gi|2501044|sp|P78600|SYPC_CANAL RecName: Full=Prolyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Proline--tRNA ligase; Short=ProRS
 gi|1845347|gb|AAC49876.1| prolyl-tRNA synthetase [Candida albicans]
          Length = 575

 Score = 91.0 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 47/261 (18%), Positives = 92/261 (35%), Gaps = 29/261 (11%)

Query: 228 QQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI 287
           +    Q   F    +   H  L +   L +I    +G++ W + G  I   +   +R+++
Sbjct: 15  KSYGNQLSKFKYSKQIPTHEVLTK---LGYITYPRAGLVNWSKMGLLIQNKISQIIRQRM 71

Query: 288 KD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA 346
            +  +EE++   +  + LW+ +  WD         K   D       + L P        
Sbjct: 72  DEIQFEEVSLSLISHKELWKLTNRWDQ----EEIFKLVGD------EYLLVPTAEEEITN 121

Query: 347 VFN-HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
                 L+SY+  P+ L +    +RNE      GL+R + F   DA+ F   E    +  
Sbjct: 122 YVKKQFLESYKNFPLALYQINPKFRNEKRPR-GGLLRGKEFLMKDAYSFDLNESEAMKTY 180

Query: 406 -KIHNLIISIYKDFGFEKIMVKLST-----------RPEKRVGSDALWDDAENIMKGVLD 453
            K+      I++D G   +  +  +                 G D +++  E      ++
Sbjct: 181 EKVVGAYHKIFQDLGIPYVKAEADSGDIGGSLSHEWHYLNSSGEDTVFECNECHNVSNME 240

Query: 454 TIKNSSQDRINTGVLLGEGAF 474
               S    I+  + +    F
Sbjct: 241 KA-LSYPKEIDETIEVSVIYF 260



 Score = 44.4 bits (103), Expect = 0.062,   Method: Composition-based stats.
 Identities = 23/117 (19%), Positives = 49/117 (41%), Gaps = 19/117 (16%)

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIMIE----NFKGNLPLWLSPIQAIVTTITS------- 562
           +S +   +M+     G I R I  + E          P  ++P +  V  ++        
Sbjct: 396 NSIEKQRIMMGCYGIG-ISRIIAAIAEINRDEKGLKWPRSIAPWEVTVVEVSKQKQLKNV 454

Query: 563 -------SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
                  +  +  QEI N+L   ++    D R++++  K+++  +  IP+ II G++
Sbjct: 455 NDNNHHNNPQDNFQEIYNILNQANIDYRLDNRSDSMGKKLKQSDLLGIPLSIILGNQ 511


>gi|256545100|ref|ZP_05472466.1| phosphoribulokinase/uridine kinase family protein [Anaerococcus
           vaginalis ATCC 51170]
 gi|256399141|gb|EEU12752.1| phosphoribulokinase/uridine kinase family protein [Anaerococcus
           vaginalis ATCC 51170]
          Length = 542

 Score = 91.0 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 86/219 (39%), Gaps = 5/219 (2%)

Query: 23  GSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIRHSCAHIM 81
             ++ +    +  K  +   +NGK+ DL+  + ++  I++I      +      + A I 
Sbjct: 17  LYEIIKEKYPNNFKDYILANVNGKIVDLNYRIFQDDKIDLIKKYTHIANLSYESTIALIC 76

Query: 82  AEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYL 141
             A++ I+   +V I   + +  Y   +        ++ +I+K+M+ +I  D P +K+  
Sbjct: 77  MLAIEKIYKNKKVNIEYSVNNCLYLSVE-NFKILHKDIEKIKKEMKNLIKEDFPIVKKTY 135

Query: 142 SHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLM 201
              +A ++F+   +  K  +L S+   E + +Y   + F          +  ++ F  + 
Sbjct: 136 KKTEALKIFKENDDLDKYNLLNSLDLNE-INIYDVKDKFYFFTNYLCPKSSWIEDFDIIY 194

Query: 202 KVAG--AYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
              G    ++   N  +L            E ++    L
Sbjct: 195 YHPGILINYKKSENSKLLDFKEQINIPKIYERSKRWTNL 233


>gi|297588571|ref|ZP_06947214.1| glycine--tRNA ligase [Finegoldia magna ATCC 53516]
 gi|297573944|gb|EFH92665.1| glycine--tRNA ligase [Finegoldia magna ATCC 53516]
          Length = 469

 Score = 91.0 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 52/335 (15%), Positives = 108/335 (32%), Gaps = 30/335 (8%)

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEP 373
           + N+        T  +     L+P    G    F +  + S +++P  + + G  +RNE 
Sbjct: 157 KFNLMFKTFQGVTEDNKSEIYLRPETAQGIFVNFKNVQRTSRKKIPFGIGQIGKSFRNEI 216

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
           +   + + R R F Q +   FC             N       + G ++  ++L    ++
Sbjct: 217 TPG-NFIFRTREFEQMELEFFCEPGTDLEWFEYWRNFCREFLLNLGMKEENLRLRDHEQE 275

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY---GPKFEYILKDAIGRD 490
            +   + +  A       L          I               G K EY+  D    +
Sbjct: 276 EL---SFYSKATTDF-EYLFPFGWGELWGIADRTDYDLSKHSEGSGEKLEYM--DPSTNE 329

Query: 491 WQCGT-IQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW 549
                 I+    +   F +F  +++ E+       R V                  +   
Sbjct: 330 KYIPYCIEPSVGVDRMFLSFLCDAYEEEQLEDNSTRTVL----------------KIHPA 373

Query: 550 LSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIIC 609
           L+  +  V  +T    + A EI N L + +     D    +I  + R       P  +  
Sbjct: 374 LAAYKVAVLPLTKKLNDKAMEIYNEL-AKNFMTHFDDAG-SIGKRYRREDEAGTPYCVTI 431

Query: 610 GDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
                 + ++ IR   +   +++++ + I  + KE
Sbjct: 432 DFDTLEDNTVTIRDRDTMEQKRMTVEEIIEFVNKE 466


>gi|70608065|ref|YP_256935.1| threonyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
 gi|68568713|gb|AAY81642.1| threonyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
          Length = 387

 Score = 91.0 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 22/100 (22%), Positives = 50/100 (50%), Gaps = 3/100 (3%)

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
             LPLW++PIQ  +  + S  ++ A +IA+ +K+    ++ D  N+ +  KI     + I
Sbjct: 266 PMLPLWMNPIQVRILPVKSDYLQDAFKIASYIKA---RVDVDDINDNLGSKIARAGKEWI 322

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           P +++ G++E    S+ I+       +  ++ +    + +
Sbjct: 323 PFVVLLGEREVKTGSLTIKLREKNEQRSYTIDELNEEIKR 362


>gi|224542127|ref|ZP_03682666.1| hypothetical protein CATMIT_01302 [Catenibacterium mitsuokai DSM
           15897]
 gi|224524964|gb|EEF94069.1| hypothetical protein CATMIT_01302 [Catenibacterium mitsuokai DSM
           15897]
          Length = 458

 Score = 91.0 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 61/390 (15%), Positives = 128/390 (32%), Gaps = 59/390 (15%)

Query: 269 HRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTI 328
           H  GW   + +++++R         I  P+               +  +M  VK A    
Sbjct: 112 HPDGWT-PEEMMTFIREHN------IACPECGGHDFTDIRQFELMFETSMGVVKDA---- 160

Query: 329 KDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
                  L+P    G    F +  + S ++LP  + + G  +RNE +   + + R R F 
Sbjct: 161 --KSKIYLRPETAQGIFVNFKNVQRTSRKKLPFGIGQIGKSFRNEITPG-NFIFRTREFE 217

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENI 447
           Q +   F    +      K  +  +    D G  K  ++     +K +   + +  A   
Sbjct: 218 QMELEFFTKPNEDLEWFEKWRHDCMQFLYDLGINKENLRYRDHDQKEL---SFYSKATT- 273

Query: 448 MKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFN 507
                          I      G G  +G   +    D +GR              S+ N
Sbjct: 274 --------------DIEYLYPFGWGELWGIA-DRTDYD-LGR----------HQEYSKKN 307

Query: 508 AFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK------------GNLPLWLSPIQA 555
             Y++  + + +   +     G+   F+ ++ + F+             +    L+P++ 
Sbjct: 308 LEYLDPDTHEKYLPYVIEPSVGADRLFLSVLADAFEEQKLENGDVRKVMHFHPALAPVKV 367

Query: 556 IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEAS 615
            V  +T    + A E+ N L       E D   + I  + R       P+ +      A 
Sbjct: 368 AVLPLTKKQSDEAMELYNDLVK-DFYCEYDQAGQ-IGKRYRRQDAIGTPLCVTVDFDTAE 425

Query: 616 ERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           + S+ +R   +    ++ +      +  ++
Sbjct: 426 DHSVTVRNRDTMEQIRLPIDQLKAYIADKT 455


>gi|227872665|ref|ZP_03990995.1| phosphoribulokinase/uridine kinase [Oribacterium sinus F0268]
 gi|227841479|gb|EEJ51779.1| phosphoribulokinase/uridine kinase [Oribacterium sinus F0268]
          Length = 553

 Score = 90.6 bits (223), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 39/209 (18%), Positives = 74/209 (35%), Gaps = 7/209 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR--EGSIEI 61
            +K+T   G +      +   D+            V V    ++ +L   +   +     
Sbjct: 2   SMKITAK-GRVVELEEGSKFQDLVPLFQDMEEYPIVLVRFGKRIYELHKRIPNVDQECSF 60

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSI---WPEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
           +T +D   +     S   ++ +A        P  +V +   +  GFY     +   + + 
Sbjct: 61  LTLKDSIGMKSYHRSAVFMLLKAFYHHCKDVPGFRVNMDYTLGGGFYGYLSGDVQITKEL 120

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L +++  M E   +  P +K+ +S E AR +F       K E L        V +Y  G 
Sbjct: 121 LEKVKASMLEYAEKKMPIMKRSVSTEDARAIFREVGMHSKEE-LFRYRMTSRVNIYSLGN 179

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAY 207
           + D   G  +++T  V  F  L    G  
Sbjct: 180 FQDYFYGYMLQNTSYVTLFDLLPYGDGFI 208


>gi|118444423|ref|YP_877137.1| glycyl-tRNA synthetase [Clostridium novyi NT]
 gi|118134879|gb|ABK61923.1| glycyl-tRNA synthetase [Clostridium novyi NT]
          Length = 463

 Score = 90.6 bits (223), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 55/351 (15%), Positives = 114/351 (32%), Gaps = 59/351 (16%)

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEP 373
           R N+        T        L+P    G    F +  +S  +++P  + + G  +RNE 
Sbjct: 151 RFNLMFKTFQGVTEDSSAEIYLRPETAQGIFVNFKNAQRSSRKKVPFGIGQIGKSFRNEI 210

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP 431
           +   +   R R F Q +   FC    +  +    K +        D G  +  ++     
Sbjct: 211 TPG-NFTFRTREFEQMELEFFCKPGTDLEWFHYWKNYC--WKFLLDLGMTEDNLRFRDHG 267

Query: 432 EKR----------------VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           E+                  G   LW  A+     +   +++S Q+   T +       Y
Sbjct: 268 EEELSFYSNATSDIEFLFPFGWGELWGVADRTDYDLKKHMEHSGQE--LTYLDPTTNEKY 325

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
            P   Y+++ ++G D       VD              + +K   + +H           
Sbjct: 326 VP---YVIEPSLGADRVALAFLVDAYDEEEL------ENGDKRTVLHLH----------- 365

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
                         L+P +A +  ++    E A ++   L     +I+ D    +I  + 
Sbjct: 366 ------------PALAPFKAAILPLSKKLSEKALDVYAKLSKK-FNIDYDEAG-SIGKRY 411

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           R       P  I        + ++ +R   + T  ++S+ + +    +E +
Sbjct: 412 RREDEIGTPYCITVDFDTLEDNTVTVRDRDNMTQIRLSIDE-LEKFLEEKV 461


>gi|156354212|ref|XP_001623294.1| predicted protein [Nematostella vectensis]
 gi|156209977|gb|EDO31194.1| predicted protein [Nematostella vectensis]
          Length = 73

 Score = 90.6 bits (223), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 2/68 (2%)

Query: 4  DIKLTFPDGSIKN-FPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
           IK+T PDG          T  ++A SIS+ LA   V   +NG+V DL   +  + S+++
Sbjct: 1  PIKITLPDGKEIEGLSWKTTPYEIACSISQGLADNTVIAKVNGEVWDLDRVLEGDCSLQL 60

Query: 62 ITPEDPRS 69
          +  +D   
Sbjct: 61 LKFDDDEG 68


>gi|301117334|ref|XP_002906395.1| prolyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
 gi|262107744|gb|EEY65796.1| prolyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
          Length = 603

 Score = 90.6 bits (223), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 41/249 (16%), Positives = 83/249 (33%), Gaps = 25/249 (10%)

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTP 297
            ++    H+ L R      + + G G+      G ++   L + +  ++ K     ++  
Sbjct: 47  SDAAVPSHQLLVRAG---FVRKGGHGLFALLPLGRRVVAKLEALIDDEMCKIGGNRVDLT 103

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY-- 355
            +    LW+QSG W S    +  ++   + +       L P +     ++      +   
Sbjct: 104 VLTPNELWKQSGRWQSRGPELMTLEDRREDL-----LILGPTHEESITSLVAAHYNAAGT 158

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISI 414
            +  +RL + G  +R+E      GL+R R F   D + F T  E+       +      I
Sbjct: 159 ADSSLRLYQIGRKFRDEIRPRF-GLLRAREFVMKDMYSFDTSYEKALQTYEDVTAAYNEI 217

Query: 415 Y------------KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
                         D G     +         VG DA+   + +      +  K      
Sbjct: 218 LISRLKLPVKRVEADSGNIGGNLSHEFHVLADVGEDAILSCSSSECDYAANVEKAEGNLP 277

Query: 463 INTGVLLGE 471
           +++  L  E
Sbjct: 278 VSSEELSDE 286



 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/168 (16%), Positives = 61/168 (36%), Gaps = 21/168 (12%)

Query: 488 GRDWQCGTIQVDFNLPSR-FNAFYVNSHSEKCHPVMIHRAVFG-SIERFIGIMIE----N 541
            R  + G +       S+ F A Y ++ + K   V +    +G  + R +   +E    +
Sbjct: 426 KRGIEVGHVFYLGQKYSKPFGATYTDAKNNK---VSLEMGCYGLGVSRLVAAAVEASHDD 482

Query: 542 FKGNLPLWLSPIQAIVTTIT-----SSAVEYAQEIANLLKS---HH---LSIETDFR-NE 589
                P+ ++P + +V +I          + A  +A  L S          +  D R  E
Sbjct: 483 HGIAWPMEIAPYKVLVMSIGGKKQDDPVSQAAWYVAGKLASGDVAGLVRDDVLLDDRWRE 542

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
           +   K+ E  +   P  ++ G +   E  + ++   +     ++  + 
Sbjct: 543 SPGSKLAESELIGYPYRVVVGKRFTKEGLVEVQTRATMEKTFLTPDEL 590


>gi|47186126|emb|CAF94519.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 88

 Score = 90.6 bits (223), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 33/75 (44%), Gaps = 1/75 (1%)

Query: 570 EIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
           ++     S     + D     T+N KIR   + +   I++ G+KE +  ++ +R   +  
Sbjct: 1   QVRQDFHSSGFMTDVDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKTSNTVNVRTRDNKV 60

Query: 629 TQKVSLLDAIPILTK 643
             + ++ + I  L +
Sbjct: 61  HGERTVEECIQRLKQ 75


>gi|115906275|ref|XP_001189525.1| PREDICTED: similar to Prolyl-tRNA synthetase
           (mitochondrial)(putative), partial [Strongylocentrotus
           purpuratus]
          Length = 149

 Score = 90.6 bits (223), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 26/150 (17%), Positives = 58/150 (38%), Gaps = 9/150 (6%)

Query: 273 WKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
            +  + LI  +  +++    ++I  P +    LW+ SG +  Y   +  ++   +     
Sbjct: 1   MRALEKLIKVIDTEMQKVGGQKIAMPGMTPSSLWKTSGRYSDYGPELITLQDRHNV---- 56

Query: 332 RTFALKPMNCPGHVAVFN-HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
             + L P +      +       S++ LP++L +  + +R+E     +GL+R R F   D
Sbjct: 57  -DYCLGPTHEEAVTDIVAGEKTLSHKRLPIKLYQITNKFRDEMRPR-YGLLRGREFLMKD 114

Query: 391 AHVFCT-KEQMFNECLKIHNLIISIYKDFG 419
            + F +  E        +      I+    
Sbjct: 115 LYTFDSNLEGAEETYRSVCEAYQRIFSILD 144


>gi|159163464|pdb|1WWT|A Chain A, Solution Structure Of The Tgs Domain From Human
          Threonyl- Trna Synthetase
          Length = 88

 Score = 90.6 bits (223), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 2/73 (2%)

Query: 3  SDIKLTFPDGSIKNFP-VHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV-REGSIE 60
            IK+T PDG   +      T   +A  IS+ LA   V   +N  V DL  P+  + ++E
Sbjct: 10 KPIKVTLPDGKQVDAESWKTTPYQIACGISQGLADNTVIAKVNNVVWDLDRPLEEDCTLE 69

Query: 61 IITPEDPRSLAVI 73
          ++  ED  + AV 
Sbjct: 70 LLKFEDEEAQAVY 82


>gi|160880206|ref|YP_001559174.1| glycyl-tRNA synthetase [Clostridium phytofermentans ISDg]
 gi|160428872|gb|ABX42435.1| glycyl-tRNA synthetase [Clostridium phytofermentans ISDg]
          Length = 456

 Score = 90.6 bits (223), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 60/351 (17%), Positives = 111/351 (31%), Gaps = 53/351 (15%)

Query: 308 SGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR-ELPVRLAEFG 366
           S + D  + N+        T     T  L+P N  G    + + ++S R +LP  + + G
Sbjct: 138 SNYTDIRQFNLMFATKRGVTEDSSSTIYLRPENAQGEYVNYLNVMRSMRAKLPFSIGQIG 197

Query: 367 SVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIM 424
             +RNE +       R   F Q +   FC K  +    +  K + +    Y       + 
Sbjct: 198 KAFRNEITPGSFTF-RTIEFEQMEYQTFCKKGSDDELYQYFKDYGISFFEYLGIDNNHLR 256

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
            +   +                                   G + G       + ++ LK
Sbjct: 257 FRDHEKLAHY----------------AKAACDIEYLFPFGWGEINGTHN----RTDFDLK 296

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK- 543
                              S+ N  Y + +S++     I  + +G     + I+ E+   
Sbjct: 297 --------------RHQEFSKVNLEYFDENSKEKIIPYIIESTYGLDRIILAILFESLVE 342

Query: 544 -----------GNLPLWLSPIQAIVTT-ITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
                        +   LSP++  V   I +   E A E+  LL+ H +    D    TI
Sbjct: 343 EKINENDSRLVLKISKILSPVKVNVLPLIKNRHGEKATEVYQLLRKH-MMASYDESG-TI 400

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             + R       P  +   D+   +  I IR   +   + V+L + +  L 
Sbjct: 401 GKRYRRGDAIGTPYAVTIDDETLEKGLITIRDRDTMEQKVVALENVLEELR 451


>gi|226323777|ref|ZP_03799295.1| hypothetical protein COPCOM_01552 [Coprococcus comes ATCC 27758]
 gi|225207961|gb|EEG90315.1| hypothetical protein COPCOM_01552 [Coprococcus comes ATCC 27758]
          Length = 491

 Score = 90.6 bits (223), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 52/391 (13%), Positives = 123/391 (31%), Gaps = 56/391 (14%)

Query: 269 HRKGWKIFQTLISYMRRKIKDDY---EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD 325
           H  G  I  ++  +   ++ + +    E+  P     +  +       ++      + A 
Sbjct: 137 HEHGIDIPDSIDGWSHEEM-EGFVKEHEVPCPTCGKHNFTEIREFNLMFKTFQGVTEDAK 195

Query: 326 DTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPSGSLHGLMRVR 384
           + +       L+P    G    F +  + S ++LP  + + G  +RNE +   +   R R
Sbjct: 196 NVV------YLRPETAQGIFVNFKNVQRTSRKKLPFGIGQIGKSFRNEITPG-NFTFRTR 248

Query: 385 GFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
            F Q +   FC  +             +      G +   V+     ++ +   + +  A
Sbjct: 249 EFEQMELEFFCKPDTDLEWFAYWKKFCLDWLFSLGLKDEEVRYRDHDKEEL---SFYSKA 305

Query: 445 ENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPS 504
              +   L          I                      A   D+     Q   N+  
Sbjct: 306 TTDV-EFLFPFGWGELWGI----------------------ADRTDYDLTQHQ---NVSG 339

Query: 505 RFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK------------GNLPLWLSP 552
           +   ++ +  +EK  P +I     G+    +  +   +              +    L+P
Sbjct: 340 QDLTYFDDETNEKYIPYVIE-PSLGADRVVLAFLCAAYDEEELEDGSTRTVMHFHPELAP 398

Query: 553 IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
           ++  V  ++    E A+++  +L  +  + E D R   I  + R       P  +     
Sbjct: 399 VKIGVLPLSKKLNEGAEKVYAMLSKY-YNCEFDDRGN-IGKRYRRQDEIGTPFCVTYDFD 456

Query: 613 EASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              + ++ +R   +   +++ + D      K
Sbjct: 457 SEEDGAVTVRDRDTMQQERIKIEDLKAYFEK 487


>gi|302380356|ref|ZP_07268826.1| glycine--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
 gi|302311846|gb|EFK93857.1| glycine--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
          Length = 465

 Score = 90.2 bits (222), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 53/336 (15%), Positives = 108/336 (32%), Gaps = 32/336 (9%)

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEP 373
           + N+        T  +     L+P    G    F +  + S +++P  + + G  +RNE 
Sbjct: 153 KFNLMFKTFQGVTEDNKSEIYLRPETAQGIFVNFKNVQRTSRKKVPFGIGQIGKSFRNEI 212

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
           +   + + R R F Q +   FC             N       + G     ++L    ++
Sbjct: 213 TPG-NFIFRTREFEQMELEFFCKPGTDLEWFDYWRNFCKEFLLNLGIRGENLRLRDHSQE 271

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL-----LGEGAFYGPKFEYILKDAIG 488
            +   + +  A       L          I            EG+  G K EY+      
Sbjct: 272 EL---SFYSKATTDF-EYLFPFGWGELWGIADRTDYDLSKHSEGS--GEKLEYMDPTTNE 325

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPL 548
           +      I+    +   F +F  +++ E+       R V                  +  
Sbjct: 326 KYIPYC-IEPSVGVDRMFLSFLCDAYDEEQLEDNTTRTVL----------------KIHP 368

Query: 549 WLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIII 608
            L+  +  V  +T    + A EI N L + +     D    +I  + R       P  + 
Sbjct: 369 ALAAYKVAVLPLTKKLNDKAMEIYNEL-AKNFMTHFDDAG-SIGKRYRREDEAGTPYCVT 426

Query: 609 CGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
                  + ++ IR   +   +++++ + I  + KE
Sbjct: 427 IDFDTLEDNTVTIRDRDTMEQKRMTVEEIIEFVNKE 462


>gi|237734398|ref|ZP_04564879.1| glycyl-tRNA synthetase [Mollicutes bacterium D7]
 gi|229382628|gb|EEO32719.1| glycyl-tRNA synthetase [Coprobacillus sp. D7]
          Length = 457

 Score = 90.2 bits (222), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 45/345 (13%), Positives = 114/345 (33%), Gaps = 48/345 (13%)

Query: 312 DSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYR 370
             ++          +  KD     L+P    G    F +  + S +++P  + + G  +R
Sbjct: 144 RQFKLMFETQMGVVEDAKD--VVYLRPETAQGIFVNFKNIQRTSRKKVPFGIGQIGKAFR 201

Query: 371 NEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR 430
           NE +   + + R+R F Q +   FC  +          +       D G ++  ++    
Sbjct: 202 NEITPG-NFIFRMREFEQMELEFFCKPDTDLEWFDYWKSYCQKFLFDLGLKEENLRFRDH 260

Query: 431 PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRD 490
            ++ +                  +  + +   +      G G  +G             D
Sbjct: 261 EKEEL------------------SFYSKATCDVEYNFPFGWGELWGIA-----------D 291

Query: 491 WQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK------- 543
                +    N   +   +   + +EK  P +I     G+   F+ ++ ++++       
Sbjct: 292 RTNYDLTQHQNHSKKSLEYLDPTTNEKYIPYVIE-PSVGADRLFLSVLCDSYEEEILEDG 350

Query: 544 -----GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
                  L   ++P +  +  +T    + A EI + L + + + E D   + I  + R  
Sbjct: 351 ETRVVMKLHPSVAPFKVAILPLTKKQSDKATEIYSQL-AKYFNCEYDVAGQ-IGKRYRRQ 408

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
                P  +        + ++ +R   +    ++ +   +  ++K
Sbjct: 409 DAIGTPYCVTVDFDTMEDETVTVRDRDTMEQIRLPINQLVDYISK 453


>gi|241818170|ref|XP_002416554.1| tRNA synthetases class II, putative [Ixodes scapularis]
 gi|215511018|gb|EEC20471.1| tRNA synthetases class II, putative [Ixodes scapularis]
          Length = 410

 Score = 90.2 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 64/392 (16%), Positives = 129/392 (32%), Gaps = 54/392 (13%)

Query: 254 DLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWD 312
           D   I+  G+G         K  + L+  +  +++    ++I  P ++   L++++G W+
Sbjct: 5   DYGLISPSGTGTFVLLPLATKSLERLVDLIDSELQSVGGQKILLPCLVPGSLFKKTGKWE 64

Query: 313 SYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY-RELPVRLAEFGSVYRN 371
                +F +K   D       + L P +      +         R LP+ L +      +
Sbjct: 65  DMGDELFKLKDRRDH-----DYCLGPTHEEAVSQLLASLPSLSLRCLPILLYQVRGRLSH 119

Query: 372 EPSGSLHGLMRVRGFTQDDAHVFCT-KEQMFNECLKIHNLIISIYKDFGFEKIMVK---- 426
                  G +   G    D + F    E        +      I +  G   + VK    
Sbjct: 120 YRRCMAPGFVATCGTLFADMYSFDRSAESAAETYDIVCTAYSRILERLGVPFVKVKASSG 179

Query: 427 -------LSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
                          +G D L+   +  +    D  +N   D+ +T +    G       
Sbjct: 180 AMGGNYSHEFHFLSNIGEDRLFVCPKCHIGVSADKTENQPCDQCSTPLEEERG------V 233

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIM 538
           E          +  GT+  D        A +++S  +    VM     FG  + R +   
Sbjct: 234 EVA------HAFSLGTVYSDP-----LKASFMDSDGKNKALVM---NCFGIGVTRLLAAS 279

Query: 539 IE----NFKGNLPLWLSPIQAIVT-TITSSAVEYA-----QEIANLLKSHHL---SIETD 585
           +E      +   PL ++P +  V      S  E         + + L S  +    +  D
Sbjct: 280 LEVLSTQSQLRWPLAIAPFKVAVVTPKARSHEEEVGLPLSLHLTSCLSSQDILAGDVLLD 339

Query: 586 FRN-ETINYKIREHSIKKIPIIIICGDKEASE 616
            R+  TI  ++++     +P +++ G + A  
Sbjct: 340 DRDSWTIGKRLKDLDHMGVPFVVVAGKRSAEA 371


>gi|153853789|ref|ZP_01995145.1| hypothetical protein DORLON_01136 [Dorea longicatena DSM 13814]
 gi|149753539|gb|EDM63470.1| hypothetical protein DORLON_01136 [Dorea longicatena DSM 13814]
          Length = 466

 Score = 90.2 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 43/344 (12%), Positives = 101/344 (29%), Gaps = 49/344 (14%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPS 374
            N+        T     T  L+P    G    F +  + S ++LP  + + G  +RNE +
Sbjct: 152 FNLMFKTFQGVTEDAKNTVYLRPETAQGIFVNFKNVQRTSRKKLPFGIGQIGKSFRNEIT 211

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              +   R R F Q +   FC  +             ++     G ++  V+     ++ 
Sbjct: 212 PG-NFTFRTREFEQMELEFFCKPDTDLEWFDYWKKFCLNWLSSLGLKEDEVRYRDHDKEE 270

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           +   + +  A   +                 G+            +    D        G
Sbjct: 271 L---SFYSKATTDV-----EFLFPFGWGELWGIA-----------DRTDYDLTQHQKVSG 311

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK----------- 543
                       +  Y +  +++ +   +     G+    +  +   +            
Sbjct: 312 Q-----------DLTYFDDETKEKYIPYVIEPSLGADRMVLAFLCSAYDEEEIGTEEKPD 360

Query: 544 ----GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
                +    L+P++  V  ++    E A+++   L     + E D R   I  + R   
Sbjct: 361 TRTVLHFHPALAPVKIGVLPLSKKLNEGAEKVFAQLSKK-YNCEYDDRGN-IGKRYRRQD 418

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
               P  +        + ++ +R   +   +++ + D      K
Sbjct: 419 EIGTPFCVTYDFDSEEDGAVTVRDRDTMEQERIKIEDLDAYFEK 462


>gi|227824328|ref|ZP_03989160.1| phosphoribulokinase/uridine kinase [Acidaminococcus sp. D21]
 gi|226904827|gb|EEH90745.1| phosphoribulokinase/uridine kinase [Acidaminococcus sp. D21]
          Length = 552

 Score = 90.2 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 69/189 (36%), Gaps = 1/189 (0%)

Query: 10  PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIITPEDPR 68
           PDG  +N+       D+A     +         +NG+   L    +EG  I  +      
Sbjct: 6   PDGKQRNYQEGTPLVDIAPDYQAAYDTPIALGVLNGREVPLQMIPQEGDRICFLDMNSVE 65

Query: 69  SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQE 128
           S      +   ++  A+    P+V + +     +  Y D   +   S  +LA +  +M+ 
Sbjct: 66  SYNTYISTFLFVLIAAMNRARPQVMLEVQNTFGNALYCDIKNKIVLSDYDLADVAAEMKA 125

Query: 129 IIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           +I   +P    +   ++A    + +    +  +L ++P    + +Y           P +
Sbjct: 126 MIQEKTPITLSFKKKQEAWSYVKPRFYCDQAPLLSALPDDVEIPVYELDGVSAYFVNPLL 185

Query: 189 RSTGQVKKF 197
              G +K+F
Sbjct: 186 PHLGYLKEF 194


>gi|189189606|ref|XP_001931142.1| prolyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187972748|gb|EDU40247.1| prolyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 488

 Score = 90.2 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 65/155 (41%), Gaps = 11/155 (7%)

Query: 273 WKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
            ++   L   + + +      +++   +  + LW+QSG + +  + +  +K   +T    
Sbjct: 7   LRVQNKLEGLIDKHMNSIGASKVSLSSITTEALWRQSGRYSA-NSELLRIKDRRETG--- 62

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
             F L P +     A+    + SY++LP+RL + G  YR+E      GL+R + F   D 
Sbjct: 63  --FLLSPTHEEEITALVASMVHSYKDLPLRLYQIGRKYRDERRPR-GGLLRAKEFMMKDL 119

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK 426
           + F   +      L+ +  +   Y +   E  +  
Sbjct: 120 YTF---DSSPKAALETYESVRDAYNNLFNELKLPY 151



 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 28/164 (17%), Positives = 62/164 (37%), Gaps = 15/164 (9%)

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI----MIENFKGNLPL 548
             T  +        NA           PV +     G   R IG     + +    N P 
Sbjct: 326 GHTFHLGTRYSVPLNAVIALRDQNLSSPVHMGCHGIGVS-RIIGAVASLLSDARGLNWPR 384

Query: 549 WLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF-----RNETINYKIREHSIKKI 603
            ++P +AIV +   +  E   E+ + L+    + + D        +++ +K+++  +   
Sbjct: 385 VIAPYEAIVLSDPKTEEEDTTEVYDALRGEERNPDIDLVLDDRAGKSLGWKLKDADLIGY 444

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLP 647
           P++++ G +   ++ + I+       + V L +    L  E+L 
Sbjct: 445 PVVVVLG-RSWKDKKVEIQCRRLGVKKDVDLKE----LRTEALA 483


>gi|293376342|ref|ZP_06622579.1| glycine--tRNA ligase [Turicibacter sanguinis PC909]
 gi|292645031|gb|EFF63104.1| glycine--tRNA ligase [Turicibacter sanguinis PC909]
          Length = 457

 Score = 89.8 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 45/342 (13%), Positives = 101/342 (29%), Gaps = 50/342 (14%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPS 374
             +           +     L+P    G    F +  + S +++P  + + G  +RNE +
Sbjct: 146 FELMFKTHMGVVSDEKSAVYLRPETAQGIFVNFKNVQRTSRKKIPFGIGQIGKSFRNEIT 205

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              +   R R F Q +   FC   +             +     G     ++      + 
Sbjct: 206 PG-NFTFRTREFEQMELEFFCKPGEDAKWYEFWKEYCWNWLVSLGMNPEHIRQREHSPEE 264

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK--FEYILKDAIGRDWQ 492
           +                  +  ++    I      G G  +G     ++ LK  +     
Sbjct: 265 L------------------SHYSNGTSDIEYRFPFGWGELWGVANRTDFDLKAHMKESGA 306

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK--------- 543
               Q               + +EK  P  I     G+    +  +++ +          
Sbjct: 307 NFEYQ-------------DPTTNEKYVPYCIE-PSVGADRVTLAFLVDAYAEETLENGET 352

Query: 544 ---GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
                    L+P +  V  +     E A E+   L  H + ++ D    TI  + R    
Sbjct: 353 REVLKFHPALAPYKVAVLPLVKKLNEQALEVFADLSKH-MMVDYDEAG-TIGKRYRRQDA 410

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
              P  +        ++ + +R   +   ++V++ + +  +T
Sbjct: 411 IGTPFCVTFDYDSLEDKKVTVRHRDTMEQERVAIDELVEYIT 452


>gi|167755650|ref|ZP_02427777.1| hypothetical protein CLORAM_01165 [Clostridium ramosum DSM 1402]
 gi|167704589|gb|EDS19168.1| hypothetical protein CLORAM_01165 [Clostridium ramosum DSM 1402]
          Length = 457

 Score = 89.8 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 45/345 (13%), Positives = 113/345 (32%), Gaps = 48/345 (13%)

Query: 312 DSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYR 370
             ++          +  KD     L+P    G    F +  + S +++P  + + G  +R
Sbjct: 144 RQFKLMFETQMGVVEDAKD--VVYLRPETAQGIFVNFKNIQRTSRKKVPFGIGQIGKAFR 201

Query: 371 NEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR 430
           NE +   + + R+R F Q +   FC  +          +       D G ++  ++    
Sbjct: 202 NEITPG-NFIFRMREFEQMELEFFCKPDTDLEWFDYWKSYCQKFLFDLGLKEENLRFRDH 260

Query: 431 PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRD 490
            ++ +                  +  + +   +      G G  +G             D
Sbjct: 261 EKEEL------------------SFYSKATCDVEYNFPFGWGELWGIA-----------D 291

Query: 491 WQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK------- 543
                +    N   +   +   + +EK  P +I     G+   F+ ++ ++++       
Sbjct: 292 RTNYDLTQHQNHSKKSLEYLDPTTNEKYIPYVIE-PSVGADRLFLSVLCDSYEEEILEDG 350

Query: 544 -----GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
                  L   ++P +  +  +T    + A EI   L + + + E D   + I  + R  
Sbjct: 351 ETRVVMKLHPSVAPFKVAILPLTKKQSDKATEIYGQL-AKYFNCEYDVAGQ-IGKRYRRQ 408

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
                P  +        + ++ +R   +    ++ +   +  ++K
Sbjct: 409 DAIGTPYCVTVDFDTMEDETVTVRDRDTMEQIRLPINQLVDYISK 453


>gi|297588275|ref|ZP_06946918.1| phosphoribulokinase [Finegoldia magna ATCC 53516]
 gi|297573648|gb|EFH92369.1| phosphoribulokinase [Finegoldia magna ATCC 53516]
          Length = 539

 Score = 89.8 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 42/217 (19%), Positives = 84/217 (38%), Gaps = 7/217 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEII 62
            IK+   +     +    T  D    I        VA+  N K+ D+   V +G +IE +
Sbjct: 1   MIKIINKN-KTYEYENK-TIYD--YGIQFGFEDSIVALK-NNKLVDIMSSVDDGDTIEFV 55

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
              +  S   +  +   ++  A +  +PE Q+ +   I D  Y +F+        +L +I
Sbjct: 56  NENNIYSQDTLMKTGILLLLLAFKIKFPEDQLVVEYTIGDYMYLEFENNNEIHFRDLEEI 115

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
            + M ++I ++    +  +S ++A ++FE +    K  +L+S+   E V LY+    +  
Sbjct: 116 RELMDDLINQNIRIERVKVSRKEAFDIFEKEGYIQKSRLLKSLDKDE-VYLYKCHNHYFG 174

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSR 219
             G     T  +K +  +    G              
Sbjct: 175 IEGFVAPFTRFLKHYKLINYFPGVALSVSRTGEFTEF 211


>gi|268323710|emb|CBH37298.1| putative glycyl-tRNA synthetase [uncultured archaeon]
          Length = 486

 Score = 89.5 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 77/472 (16%), Positives = 149/472 (31%), Gaps = 79/472 (16%)

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHL 304
            R+       F I    +G   +   G  + + + +  R   +++ + EI T  V+ + +
Sbjct: 19  ARRRGYLGQAFEIYGAAAGFYDYGPLGAGLKRRVENQWRDFYMREGFYEIETTSVVPRSV 78

Query: 305 WQQSGHWDSYRANMFAVK------------------------------------------ 322
           ++ SGH +S+                                                  
Sbjct: 79  FEASGHLESFTDPTVMCTRCKNFFRVAEDLDVGKKCPDCGGVLEAAGEINLMFPTRIGVP 138

Query: 323 CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE-LPVRLAEFGSVYRNEPSGSLHGLM 381
            A    K      L+P    G    F   L+  R+ LP  + + G  YRNE S     L+
Sbjct: 139 KAGSEEKTKSEAYLRPETAQGIFLNFQRLLRFNRDKLPFGIIQIGKAYRNEISPR-QSLI 197

Query: 382 RVRGFTQDDAHVFCTK---------EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
           R+R FT  +  VF            E + +  L++     +   + G E    K      
Sbjct: 198 RLREFTLAEVEVFVAPSEKNSHPEFEAVADRKLRLVPASSNTNYELGIENYEDKSVGEAV 257

Query: 433 KR-VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF---EYILKDAIG 488
           +  + ++         +   L+ +               E A Y       E+ L D  G
Sbjct: 258 RSGIIANEYLGYHIAKVDEFLEGLGIPRAKLRFRQHQRDEMAHYATDCWDAEF-LSDRYG 316

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHS----EKCHPVMIHRAVFGSIERFIGIMIENFK- 543
              +   +    +   + +A   N+      E+   +         I+R    ++E+   
Sbjct: 317 -WMEIVGVADRGDYDLKAHASSSNTDMSVRTEQGKIIPHVIEPSYGIDRIFYALLESAYY 375

Query: 544 -----------GNLPLWLSPIQAIVTTITSSAV--EYAQEIANLLKSHHLSIETDFRNET 590
                        L   L+PI+A V  + + A   E A+E+   L+   + +E D    +
Sbjct: 376 KEQVGKENRQVLKLKSELAPIKAAVFPLLNKAELKEKAREVFQNLRDASIFVEYDGSG-S 434

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           I  + R       P  I    +   + ++ IR   +    +V + +   +L 
Sbjct: 435 IGRRYRRQDEIGTPYCITIDYETLEDDAVTIRERDTMKQVRVPIAEVEKVLA 486


>gi|255327243|ref|ZP_05368317.1| glycine--tRNA ligase [Rothia mucilaginosa ATCC 25296]
 gi|255295523|gb|EET74866.1| glycine--tRNA ligase [Rothia mucilaginosa ATCC 25296]
          Length = 459

 Score = 89.5 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 67/381 (17%), Positives = 130/381 (34%), Gaps = 36/381 (9%)

Query: 274 KIFQ--TLISYMRRK--IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
           ++ Q   L ++  +K    +  EEI  P    +  W +  ++                  
Sbjct: 98  RLRQDHLLENFEAKKGRAAEGMEEIACPNCGTRGEWTEPQNFSG-----LMKTYLGPVDN 152

Query: 330 DLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQ 388
           +     L+P    G    FN+ +  S +  P  + + G  +RNE +   + + R R F Q
Sbjct: 153 EEGLHFLRPETAQGIFVNFNNVVTASRKRPPFGIGQIGKSFRNEITPG-NFIFRTREFEQ 211

Query: 389 DDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKL-----STRPEKRVGSDALWDD 443
            +   F   +       +      S + D G     ++        R     G+  +   
Sbjct: 212 MEIEYFVHPDDADKYFNEWVEDCWSWFVDLGINPDNMRRFDVPKEERAHYSAGTIDVEYR 271

Query: 444 AENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLP 503
                    + +  +++   + GV          K EY  + A G  +    I+  F L 
Sbjct: 272 FGFQGSEWGELMGVANRTDYDLGVHNEHS---NAKLEYFDQ-ATGERYVPYVIEPSFGLT 327

Query: 504 SRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSS 563
               AF V+++ E   P        G  +R +          L   L+P++A V  ++  
Sbjct: 328 RSMMAFLVDAYVEDEAPNTKG----GVDKRVV--------LKLDPRLAPVKAAVLPLSKK 375

Query: 564 AV--EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
           A   E A ++AN L+    +++ D     I  + R       P  I        ++++ I
Sbjct: 376 AELSEPATKLANELRGL-WNVDYDEAGA-IGRRYRRQDEIGTPFCITVDFDTLEDQAVTI 433

Query: 622 RRFGSTTTQKVSLLDAIPILT 642
           R   +   ++V+L      L 
Sbjct: 434 RERDTMNQERVALDQVKSYLA 454


>gi|225017181|ref|ZP_03706373.1| hypothetical protein CLOSTMETH_01107 [Clostridium methylpentosum
           DSM 5476]
 gi|224950100|gb|EEG31309.1| hypothetical protein CLOSTMETH_01107 [Clostridium methylpentosum
           DSM 5476]
          Length = 482

 Score = 89.5 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 47/341 (13%), Positives = 107/341 (31%), Gaps = 46/341 (13%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    F +  ++  ++LP  +A+ G  +RNE +
Sbjct: 171 FNLMFKTFQGVTEDAKNEIYLRPETAQGIFVNFANIQRTTRKKLPFGVAQVGKSFRNEIT 230

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              +   R R F Q +   FC             +   +     G ++  ++L     + 
Sbjct: 231 PG-NFTFRTREFEQMELEFFCAPGTDLEWFHYWKDACKNWLLSLGIKEENIRLRDHDPEE 289

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           +   + + +A   +                 G+                      D    
Sbjct: 290 L---SHYSNATTDI-----EFVFPFGWGELWGIA---------------------DRTNF 320

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK----------- 543
            +    N   +   ++    +E   P +I     G+    +  + E +            
Sbjct: 321 DLTQHQNHSGKSLEYFDQQKNEHYVPYVIE-PSLGADRVALAFLCEAYDEEEIAEGDTRV 379

Query: 544 -GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
             +L   L+P +A V  ++    E A E+   L + H  ++ D    +I  + R      
Sbjct: 380 VMHLHPALAPFKACVLPLSKKLNEQAGEVYEQL-AKHFMVDYDDTG-SIGKRYRRQDEIG 437

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            P+ I    +   +  + +R   +   +++ + + +  + K
Sbjct: 438 TPVCITYDFESVEDGCVTVRDRDTMQQERIRIDELVGYIEK 478


>gi|283458533|ref|YP_003363161.1| glycyl-tRNA synthetase [Rothia mucilaginosa DY-18]
 gi|283134576|dbj|BAI65341.1| glycyl-tRNA synthetase [Rothia mucilaginosa DY-18]
          Length = 502

 Score = 89.5 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 65/381 (17%), Positives = 131/381 (34%), Gaps = 36/381 (9%)

Query: 274 KIFQ--TLISYMRRKIK--DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
           ++ Q   L ++  +K +  +  +EI  P    +  W +  ++                  
Sbjct: 141 RLRQDHLLENFEAKKGRPAEGMDEIACPNCGTRGEWTEPQNFSG-----LMKTYLGPVDN 195

Query: 330 DLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQ 388
           +     L+P    G    FN+ +  S +  P  + + G  +RNE +   + + R R F Q
Sbjct: 196 EEGLHFLRPETAQGIFVNFNNVVTASRKRPPFGIGQIGKSFRNEITPG-NFIFRTREFEQ 254

Query: 389 DDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK-----LSTRPEKRVGSDALWDD 443
            +   F   +       +      + + D G     ++        R     G+  +   
Sbjct: 255 MEIEYFVHPDDADKYFNEWVEDCWNWFVDLGINPDNMRRFDVPQEERAHYSAGTIDVEYR 314

Query: 444 AENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLP 503
                    + +  +++   + GV          K EY  + A G  +    I+  F L 
Sbjct: 315 FGFQGSEWGELMGVANRTDYDLGVHNEHS---NAKLEYFDQ-ATGERYVPYVIEPSFGLT 370

Query: 504 SRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSS 563
               AF V+++ E   P        G  +R +          L   L+P++A V  ++  
Sbjct: 371 RSMMAFLVDAYVEDEAPNTKG----GVDKRVV--------LKLDPRLAPVKAAVLPLSKK 418

Query: 564 AV--EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
           A   E A ++AN L+    +++ D     I  + R       P  I        ++++ I
Sbjct: 419 AELSEPATKLANELRGL-WNVDYDEAGA-IGRRYRRQDEIGTPFCITVDFDTLEDQAVTI 476

Query: 622 RRFGSTTTQKVSLLDAIPILT 642
           R   +   ++V+L      L 
Sbjct: 477 RERDTMNQERVALDQVKSYLA 497


>gi|168187059|ref|ZP_02621694.1| glycyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
 gi|169295056|gb|EDS77189.1| glycyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
          Length = 463

 Score = 89.1 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 54/349 (15%), Positives = 109/349 (31%), Gaps = 55/349 (15%)

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEP 373
           R N+        T        L+P    G    F +  +S  +++P  + + G  +RNE 
Sbjct: 151 RFNLMFKTFQGVTEDSNAEIYLRPETAQGIFVNFKNAQRSSRKKVPFGIGQIGKSFRNEI 210

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
           +   +   R R F Q +   FC             N       D G  +  ++     E+
Sbjct: 211 TPG-NFTFRTREFEQMELEFFCKPGTDLEWFHYWKNYCWKFLLDLGMTEESLRFRDHGEE 269

Query: 434 R----------------VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
                             G   LW  A+     +   +++S Q+   T +       Y P
Sbjct: 270 ELSFYSNATSDIEFLFPFGWGELWGVADRTDYDLKKHMEHSGQE--LTYLDPTTNEKYVP 327

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
              Y+++ ++G D       VD              + +    +  H             
Sbjct: 328 ---YVIEPSLGADRVALAFLVDAYDEEEL------ENGDTRTVLHFH------------- 365

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
                       L+P +A +  ++    E A ++   L     +I+ D    +I  + R 
Sbjct: 366 ----------PVLAPFKAAILPLSKKLSEKALDVYAKLSKK-FNIDYDEAG-SIGKRYRR 413

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
                 P  I        + ++ +R   + T  ++S+ + +    +E +
Sbjct: 414 EDEIGTPYCITVDFDTLEDNTVTVRDRDNMTQIRLSIDE-LEKFLEEKV 461


>gi|282856646|ref|ZP_06265914.1| phosphoribulokinase family protein [Pyramidobacter piscolens W5455]
 gi|282585495|gb|EFB90795.1| phosphoribulokinase family protein [Pyramidobacter piscolens W5455]
          Length = 558

 Score = 89.1 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 42/208 (20%), Positives = 83/208 (39%), Gaps = 16/208 (7%)

Query: 6   KLTFPDGSIKNFPVHATGSDVAESISRSLAK---KAVAVAINGKVCDLSDPV-REGSIEI 61
            + FPDG I      A+G ++        A+     VA  +N  +  L+  V +E  +  
Sbjct: 3   NVAFPDGKILPCDAPASGEELLRR--AGAARGGVPVVAWHVNHYLRPLNWIVDKEARVSW 60

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDF---DKEQPFSSDE 118
           +       ++V + S + ++  A + +     + +   I +G +++      E+    DE
Sbjct: 61  VDLASSEGVSVFQSSLSFVLTIAARRVLGR-GLRVTHSISEGTFWEIVPRPGERRNGEDE 119

Query: 119 ------LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVT 172
                 +  I  +M+ IIA D P   +    ++AR  FE  +   K ++L  + +   V 
Sbjct: 120 EILADKVGAIAAEMERIIAADLPIRAEMTPIDEARRFFEEHERPDKAKLLAHMWSDLPVE 179

Query: 173 LYRQGEWFDLCRGPHVRSTGQVKKFFKL 200
           +       D    P V STG ++ +   
Sbjct: 180 MACCDGERDHFYSPMVPSTGYLRPYKLS 207


>gi|326913192|ref|XP_003202924.1| PREDICTED: 39S ribosomal protein L39, mitochondrial-like [Meleagris
           gallopavo]
          Length = 225

 Score = 89.1 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 36/149 (24%), Positives = 68/149 (45%), Gaps = 15/149 (10%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPEDPRSLAV---IRHS 76
           +T  + A  +S    KK+V   ++G+V D+  P+ +   I+ +T +D     V      S
Sbjct: 77  STPYNCAMHLSEWHCKKSVLALVDGEVWDMYRPLTKSCEIQFLTFKDEDPEEVNKAYWRS 136

Query: 77  CAHIMAEAVQSIWPE------VQVAIGPIIEDGFYYDF-----DKEQPFSSDELAQIEKK 125
           CA IMA  ++  + +      V+    P+I   F YD        +   + D    + + 
Sbjct: 137 CAMIMASVLKRAFKDEYSVNLVKAPEVPVISGAFCYDIILDNRLNDWKPTKDNFRSLTRD 196

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKK 154
             ++I +D PF   ++  + ARE+F++ K
Sbjct: 197 ASKLIDKDLPFETLHVEAKVAREMFQNNK 225


>gi|307069651|ref|YP_003878128.1| putative prolyl-tRNA synthetase [Candidatus Zinderia insecticola
           CARI]
 gi|306482911|gb|ADM89782.1| putative prolyl-tRNA synthetase [Candidatus Zinderia insecticola
           CARI]
          Length = 553

 Score = 89.1 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/177 (19%), Positives = 80/177 (45%), Gaps = 10/177 (5%)

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLD 301
             +++ L     +  I +  SG+  +      I + + S +  ++K ++  EI  P +  
Sbjct: 17  NINNKTLKIINKIGMIKKISSGIYTYMPILLLILKKIKSIINYEMKKNNITEILMPIIQP 76

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
            ++W+++  W   +  +   K      +  + F ++P +      +    L +Y++LP+ 
Sbjct: 77  SNIWKKTKRWYKMKNELLKFKN-----RKKKYFVMQPTSEELITYIIKKELLNYKQLPLI 131

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
                + +R+E      GL+R++ F   DA+ F   +  F   +K + L+++IYK+ 
Sbjct: 132 FYNIQNKFRDELR-CKSGLIRLKEFIMKDAYSF---DISFKNSIKNYKLMLNIYKNI 184


>gi|284047860|ref|YP_003398199.1| uridine kinase [Acidaminococcus fermentans DSM 20731]
 gi|283952081|gb|ADB46884.1| uridine kinase [Acidaminococcus fermentans DSM 20731]
          Length = 553

 Score = 88.7 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 75/199 (37%), Gaps = 2/199 (1%)

Query: 5   IKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEIIT 63
           +++  PDG  K+F  H     +A++     +       +NG++  L    +EG  +    
Sbjct: 1   MQIIGPDGKPKSFQDHTPLGVIAKTYQSMYSSTIALGVVNGQLRPLQLCPQEGDHVTFYA 60

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIE 123
            +          +    + EA++   PE+++ +      G Y     +   S  +L  + 
Sbjct: 61  LDSEPGYRAYIATFQFALIEAMRRQRPEIRLEVENTFGHGLYCAVKNKIFLSKYDLEDVT 120

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDL 182
           + M+E+I    P   + ++ ++A           +  +L+ +P    + LY  G      
Sbjct: 121 RCMEEMIRDQEPVQVKQITRDEAWNYVNPAFYRDEAPLLDVLPENYQINLYGVGGHRLAY 180

Query: 183 CRGPHVRSTGQVKKFFKLM 201
              P + + G +K F    
Sbjct: 181 SVTPLLPNLGCLKVFELRW 199


>gi|240276126|gb|EER39638.1| prolyl-tRNA synthetase [Ajellomyces capsulatus H143]
 gi|325090008|gb|EGC43318.1| prolyl-tRNA synthetase [Ajellomyces capsulatus H88]
          Length = 555

 Score = 88.7 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 64/159 (40%), Gaps = 11/159 (6%)

Query: 269 HRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
              G ++ + L   + + ++     +++   +  Q LW++SG       +    K  D  
Sbjct: 2   LPLGLRVQEKLERLVDKHMRTLGASKLSLSSISSQALWEKSGRLKK---DSEFFKFQD-- 56

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
            +    F L P +     ++    + SY++LP+R+ +    YR+EP     GL+R R F 
Sbjct: 57  -RKKARFLLAPTHEEEITSLVAGVMNSYKDLPLRVYQISRKYRDEPRPR-QGLLRGREFI 114

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK 426
             D + F   +      +K +N +   Y     E  +  
Sbjct: 115 MKDLYTF---DYNAEMAIKTYNAVKDTYVRLFDELRIPY 150



 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 46/111 (41%), Gaps = 7/111 (6%)

Query: 507 NAFYVNSHSEKCHPVMIHRAVFGSIERFIGI---MIENFKGNLPLWLSPIQAIVTTITSS 563
           N    N +S    P+ +     G       I   +  +   N P  ++P +A++      
Sbjct: 408 NDSKANDNSSVSVPLQMGCHGIGVSRMISAIADSLANSKGLNWPRAIAPFEAMIIPD-KG 466

Query: 564 AVEYAQEIANLLKSHHLSIE---TDFRNETINYKIREHSIKKIPIIIICGD 611
             E A+++ + +   ++       D R++ + +K+R+  +   P+II+ G 
Sbjct: 467 LEEEAEKVYDAISRINIDAVDAIIDDRDKNLAWKLRDADLIGYPVIIVVGK 517


>gi|225560003|gb|EEH08285.1| prolyl-tRNA synthetase [Ajellomyces capsulatus G186AR]
          Length = 555

 Score = 88.7 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 64/159 (40%), Gaps = 11/159 (6%)

Query: 269 HRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
              G ++ + L   + + ++     +++   +  Q LW++SG       +    K  D  
Sbjct: 2   LPLGLRVQEKLERLVDKHMRTLGASKLSLSSISSQALWEKSGRLKK---DSEFFKFQD-- 56

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
            +    F L P +     ++    + SY++LP+R+ +    YR+EP     GL+R R F 
Sbjct: 57  -RKKARFLLAPTHEEEITSLVAGVMNSYKDLPLRVYQISRKYRDEPRPR-QGLLRGREFI 114

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK 426
             D + F   +      +K +N +   Y     E  +  
Sbjct: 115 MKDLYTF---DYNAEMAIKTYNAVKDTYVRLFDELRIPY 150



 Score = 61.0 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 56/138 (40%), Gaps = 8/138 (5%)

Query: 507 NAFYVNSHSEKCHPVMIHRAVFGSIERFIGI---MIENFKGNLPLWLSPIQAIVTTITSS 563
           N    N +S    P+ +     G       I   +  +   N P  ++P +A++      
Sbjct: 408 NDSKANDNSSVSVPLQMGCHGIGVSRMISAIADSLANSKGLNWPRAIAPFEAMIIPD-KG 466

Query: 564 AVEYAQEIANLLKSHHLSIE---TDFRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
             E A+++ + +   ++       D R++ + +K+R+  +   P+II+ G     E  + 
Sbjct: 467 LEEEAEKVYDAISRINIDAVDAIIDDRDKNLAWKLRDADLIGYPVIIVVGKSWRMENKLE 526

Query: 621 IR-RFGSTTTQKVSLLDA 637
           ++    +   + VSL D 
Sbjct: 527 VQCHRLNNLRETVSLPDL 544


>gi|328947281|ref|YP_004364618.1| glycyl-tRNA synthetase [Treponema succinifaciens DSM 2489]
 gi|328447605|gb|AEB13321.1| glycyl-tRNA synthetase [Treponema succinifaciens DSM 2489]
          Length = 484

 Score = 88.7 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 53/353 (15%), Positives = 102/353 (28%), Gaps = 58/353 (16%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR-ELPVRLAEFGSVYRNEPS 374
            N+           +     L+P  C G    F + ++S R ++P  +A+ G  +RNE  
Sbjct: 157 FNLMFKTHQGPVATEASLVYLRPETCQGIFTDFKNIVQSNRMKIPFGVAQVGKSFRNEII 216

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              + + R   F Q +   FC          +      + Y  +G  +            
Sbjct: 217 FK-NFIFRTCEFEQMEMEYFCKPGTEDETFARWRKDRWNFYLKYGIAE------------ 263

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
                 W   + +     D      +  I    + G                        
Sbjct: 264 --DHLNWHHHDKLAHYAKDAYDIQYKFPIGFEEIEGI-----------------HSRTDF 304

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK----------- 543
            +        +   +       K +   +     G    F+  + E ++           
Sbjct: 305 DLSQHEQYSKKDMHYIDQDDGNKRYIPYVVETSAGLNRNFLMFLCEAYEEQNVAKEGEPE 364

Query: 544 -----GNLPLWLSPIQAIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                 +L   L+P+   V  +       E A+EI ++LK     +    ++ TI  + R
Sbjct: 365 DFRTVLHLDPRLAPVTVAVLPLMKKDGLAEKAKEIQHILKE--DFVTDYDQSGTIGKRYR 422

Query: 597 EHSIKKIPIIIICGDKEASE-----RSIGIRRFGSTTTQKVSLLDAIPILTKE 644
                  P  +               ++ +R   S   ++VSL D IP + KE
Sbjct: 423 RQDEIGTPFCVTVDHDTLDSSSADFNTVTVRFRDSMEQKRVSLDDLIPFIQKE 475


>gi|300857280|ref|YP_003782264.1| glycyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
 gi|300437395|gb|ADK17162.1| glycyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
          Length = 463

 Score = 88.7 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 49/343 (14%), Positives = 112/343 (32%), Gaps = 50/343 (14%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    F +  + S +++P  +A+ G  +RNE +
Sbjct: 152 FNLMFKTFQGVTEDSKSEIYLRPETAQGIFVNFKNVQRTSRKKIPFGIAQIGKSFRNEIT 211

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
              +   R R F Q +   FC    +  +++  K +     +      E I  +   + E
Sbjct: 212 PG-NFTFRTREFEQMELEFFCKPGTDLEWHDYWKKYCWNFLLSLGIKEENIRFRDHDKEE 270

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
               S+A  D                    I      G G  +G         A   D+ 
Sbjct: 271 LSHYSNATSD--------------------IEYLFPFGWGELWGV--------ADRTDYD 302

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK--------- 543
               Q         +  Y+++ +++ +         G+    +  +++ +          
Sbjct: 303 LKQHQEHSGK----DMTYLDTVTKEKYIPYCIEPSVGADRAVLAFLVDAYDEEELEGGDV 358

Query: 544 ---GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
               +    ++P +A +  ++    E A E+ N+L+    ++E D    +I  + R    
Sbjct: 359 RTVLHFHPAIAPFKAAILPLSKKLSEKALEVYNILRK-DFNVEYDDAG-SIGKRYRREDE 416

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              P  I        + ++ +R   +    ++ + +    + +
Sbjct: 417 IGTPYCITVDFDTMDDNTVTVRDRDTMEQFRIKIEELSAFIQE 459


>gi|28211584|ref|NP_782528.1| histidyl-tRNA synthetase [Clostridium tetani E88]
 gi|32130099|sp|Q892X7|SYH_CLOTE RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|28204025|gb|AAO36465.1| histidyl-tRNA synthetase [Clostridium tetani E88]
          Length = 439

 Score = 88.7 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 73/446 (16%), Positives = 142/446 (31%), Gaps = 96/446 (21%)

Query: 269 HRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
                 +F  +   +R   +   +  ++TP +               ++ +   K   +T
Sbjct: 18  LPADQIVFNKMKDTIRHNYEKFGFIPLDTPTI--------------EKSEILLAKGGGET 63

Query: 328 IKDLRTFALKPMNCPGHVAV------FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
            K +  F     +      +      +     S    P R      V+R    G  +   
Sbjct: 64  EKQIYRFNKGNTDLSLRFDLTVPLARYVSQHFSDLNFPFRRYHISKVFR----GERNQKG 119

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR---PEKRVGSD 438
           R R F Q D  +            +I ++I   +K+ GFE   ++++ R        G+D
Sbjct: 120 RFREFYQCDIDIIGNGSLSIINDAEIPSIIYQTFKELGFEDFTIRINNRKVLNGFFEGTD 179

Query: 439 ------------ALWDDAENIMKGVLDTIKNS---------------------------- 458
                        +    E+ ++  L  +                               
Sbjct: 180 VEDRKGVLRAIDKIEKIGEDGVRKELQELGLEDSKIDKIINFINIKGTKSEVIKSLKELD 239

Query: 459 -SQDRINTGVLLGEG------AFYGP----KFEYILKDAIGRDWQCGTIQVDF--NLPS- 504
              D    GV   E       +F  P    K +  +  A G D+  GT+      N P  
Sbjct: 240 IENDVFKEGVYELEKVVHYIKSFNVPDKNYKIDLTI--ARGLDYYTGTVYETVLNNYPQI 297

Query: 505 -------RFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIV 557
                  R++    +  ++K   V I   +     R    + E          +  QA+V
Sbjct: 298 GSVCSGGRYDNLAEHYTNQKLPGVGISIGL----TRLFYQLREAKIIGENASSTLSQALV 353

Query: 558 TTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASER 617
             +  + +EY+ ++AN L+ + +  E    +  I  K       KIP +I+ G+ E  E 
Sbjct: 354 IPVGDT-MEYSIKVANKLRENEIISELYLEDAKIGKKFAYADKLKIPYVILIGEDELKEE 412

Query: 618 SIGIRRFGSTTTQKVSLLDAIPILTK 643
            + ++   +   + +SL +AI I+  
Sbjct: 413 KVSVKNMETGNQESMSLEEAIKIIKN 438


>gi|153815621|ref|ZP_01968289.1| hypothetical protein RUMTOR_01857 [Ruminococcus torques ATCC 27756]
 gi|317502155|ref|ZP_07960332.1| glycine-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|331090328|ref|ZP_08339212.1| glycyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA]
 gi|145847052|gb|EDK23970.1| hypothetical protein RUMTOR_01857 [Ruminococcus torques ATCC 27756]
 gi|316896442|gb|EFV18536.1| glycine-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|330401463|gb|EGG81048.1| glycyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA]
          Length = 466

 Score = 88.7 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 49/344 (14%), Positives = 105/344 (30%), Gaps = 49/344 (14%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPS 374
            N+        T     T  L+P    G    F +  + S ++LP  +A+ G  +RNE +
Sbjct: 152 FNLMFKTFQGVTEDAKNTVYLRPETAQGIFVNFKNVQRTSRKKLPFGIAQIGKSFRNEIT 211

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              +   R R F Q +   FC  +          N  ++   + G ++  V+      + 
Sbjct: 212 PG-NFTFRTREFEQMELEFFCKPDTDLEWFDYWKNFCLNWLSELGLKEDEVRYRDHDAEE 270

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           +   + +  A   +   L          I       +   Y                   
Sbjct: 271 L---SFYSKATTDV-EFLFPFGWGELWGI------ADRTDYDLT---------------- 304

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKG------ 544
                    S  +  Y +  +++ +   +     G+    +  +     E   G      
Sbjct: 305 ----QHQNVSGQDLTYFDDEAKEKYIPYVIEPSLGADRMVLAFLCSAYDEENIGTEEKPD 360

Query: 545 -----NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
                +    L+P++  V  ++    E A+++   L  +  + E D R   I  + R   
Sbjct: 361 MRTVLHFHPALAPVKIGVLPLSKKLNEGAEKVFAQLSKY-YNCEFDDRGN-IGKRYRRQD 418

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
               P  +        + ++ +R   +   ++V + D      K
Sbjct: 419 EIGTPFCVTYDFDSEEDGAVTVRDRDTMEQERVKIEDLKAYFEK 462


>gi|260589680|ref|ZP_05855593.1| glycine--tRNA ligase [Blautia hansenii DSM 20583]
 gi|331083112|ref|ZP_08332229.1| glycyl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA]
 gi|260539920|gb|EEX20489.1| glycine--tRNA ligase [Blautia hansenii DSM 20583]
 gi|330405114|gb|EGG84651.1| glycyl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA]
          Length = 464

 Score = 88.3 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 56/388 (14%), Positives = 123/388 (31%), Gaps = 52/388 (13%)

Query: 271 KGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           KG  I  ++ ++ + ++KD  EE      +      +    D  + N+        T   
Sbjct: 110 KGIAIEGSVDAWSQEQMKDFIEE----HQIPCPTCGKHNFTDIRQFNLMFKTFQGVTEDA 165

Query: 331 LRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
             T  L+P    G    F +  + S ++LP  +A+ G  +RNE +   +   R R F Q 
Sbjct: 166 KNTVYLRPETAQGIFVNFKNVQRTSRKKLPFGIAQIGKSFRNEITPG-NFTFRTREFEQM 224

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMK 449
           +   FC  +             +      G +   ++     ++ +   + +  A   + 
Sbjct: 225 ELEFFCKPDTDLEWFAYWKQFCLDWLHSLGLKDEEIRYRDHDKEEL---SFYSKATTDV- 280

Query: 450 GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAF 509
             L          I                      A   D+     Q   N+  +   +
Sbjct: 281 EFLFPFGWGELWGI----------------------ADRTDYDLTQHQ---NVSGQDMTY 315

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP--------------LWLSPIQA 555
           + +  ++K  P +I     G+    +  +   +   +                 L+P++ 
Sbjct: 316 FDDETNQKYIPYVIE-PSLGADRMVLAFLCSAYDEEVLDAEKNDVRTVLRFHPALAPVKI 374

Query: 556 IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEAS 615
            V  ++    E A ++   L     + E D R   I  + R       P  +       +
Sbjct: 375 GVLPLSKKLNEGALKVFEQLSKK-YNCEFDDRGN-IGKRYRRQDEIGTPFCVTYDFDSET 432

Query: 616 ERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           + ++ +R   +   ++V + D      +
Sbjct: 433 DGAVTVRDRDTMEQERVKIEDLKAYFEE 460


>gi|218513336|ref|ZP_03510176.1| prolyl-tRNA synthetase [Rhizobium etli 8C-3]
          Length = 215

 Score = 88.3 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 23/163 (14%), Positives = 54/163 (33%), Gaps = 12/163 (7%)

Query: 489 RDWQCGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGN 545
           R  + G I            A       ++     +H   +G    R +  +IE +   N
Sbjct: 55  RGIEAGHIFYFGTKYSEPMGAKVQGPDGKEH---FVHMGSYGIGPTRLVPAIIEASHDDN 111

Query: 546 LPLWLS---PIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
             +W +   P   +V  +     +  +  + I   L      +  D  ++    K     
Sbjct: 112 GIIWPASVAPFDVVVINMKAGDQACDDTCELIYAALTKAGKDVLYDDTDDRAGTKFATAD 171

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +  +P+ II G +  +   + ++   +   + +++  AI    
Sbjct: 172 LIGVPVQIIAGPRAVANGEVEVKDRKTGARETMTIEAAINRFV 214


>gi|160931282|ref|ZP_02078683.1| hypothetical protein CLOLEP_00119 [Clostridium leptum DSM 753]
 gi|156869760|gb|EDO63132.1| hypothetical protein CLOLEP_00119 [Clostridium leptum DSM 753]
          Length = 450

 Score = 88.3 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 51/384 (13%), Positives = 121/384 (31%), Gaps = 59/384 (15%)

Query: 271 KGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            G   F+ +  Y++        E  +    D             + N+        T   
Sbjct: 107 NGMT-FEQMSDYIKEHGI-TCPECGSANFTDIR-----------KFNLMFKTFQGVTEDA 153

Query: 331 LRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
                L+P    G    F +  ++  R+LP  + + G  +RNE +   +   R R F Q 
Sbjct: 154 KNEIFLRPETAQGIFVNFANIQRTTRRKLPFGVCQIGKSFRNEITPG-NFTFRTREFEQM 212

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMK 449
           +   FC  +          +   +     G ++  ++L    ++ +   + +  A   + 
Sbjct: 213 ELEFFCKPDTDLEWFYYWKDYCKNWLLSLGIKEENMRLRDHEKEEL---SFYSKATTDI- 268

Query: 450 GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAF 509
             L          I       +   Y  K     +D  G+  +                +
Sbjct: 269 EYLFPFGWGELWGI------ADRTNYDLK---QHQDHSGKSLE----------------Y 303

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK------------GNLPLWLSPIQAIV 557
           +  S + +  P ++     G+    +  + E +              +L   L+P +  V
Sbjct: 304 FDPSDNTRYIPYVVE-PSLGADRVALAFLCEAYDEEEVGEKDTRVVMHLHPALAPYKCAV 362

Query: 558 TTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASER 617
             ++    E A+++ ++L+     +E D    +I  + R       P  +       ++ 
Sbjct: 363 LPLSKKLNENAEKVYHMLQKR-FMVEYDDAG-SIGKRYRRQDEIGTPFCLTYDFDSETDG 420

Query: 618 SIGIRRFGSTTTQKVSLLDAIPIL 641
            + +R   +   ++V++      +
Sbjct: 421 CVTVRDRDTMAQERVAIDKLAEYI 444


>gi|317055716|ref|YP_004104183.1| glycyl-tRNA synthetase [Ruminococcus albus 7]
 gi|315447985|gb|ADU21549.1| glycyl-tRNA synthetase [Ruminococcus albus 7]
          Length = 461

 Score = 88.3 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 51/344 (14%), Positives = 113/344 (32%), Gaps = 49/344 (14%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    F +  ++  +++P  +A+ G  +RNE +
Sbjct: 147 FNLMFKTFQGITEDSKSELYLRPETAQGIFVNFANIQRTTRKKVPFGVAQVGKSFRNEIT 206

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              + + RVR F Q +   FC                          +      +  +  
Sbjct: 207 PG-NFIFRVREFEQMELEFFCKPGTDL--------------------EWFDYWRSFCKNF 245

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           + S  + ++   +     + +   S+   +   L   G  +G  +    +          
Sbjct: 246 LLSLNIKEENLRLRDHSAEELCFYSKATTDFEYLFPFG--WGELWGVADRTDYD------ 297

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK----------- 543
            +    N   +   ++    +E+  P +I     G    F+ I+ E +            
Sbjct: 298 -LTQHINTSGKSLDYFDPETNERYIPYVIE-PSLGVERLFLTIVTEAYDEEDIGTPEKPD 355

Query: 544 ----GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
                +    L+P +A V  ++    E A E+ + L + + S++ D    +I  + R   
Sbjct: 356 VRTVMHFHPALAPFKACVLPLSKKLAEPAGELYDTL-AKNFSVDYDETG-SIGKRYRRQD 413

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
               P  I      A +  + +R   S   ++V + + +  + K
Sbjct: 414 EIGTPFCITYDFDSAEDGCVTVRDRDSMEQERVKIDELVEYINK 457


>gi|167750313|ref|ZP_02422440.1| hypothetical protein EUBSIR_01287 [Eubacterium siraeum DSM 15702]
 gi|167656673|gb|EDS00803.1| hypothetical protein EUBSIR_01287 [Eubacterium siraeum DSM 15702]
 gi|291529864|emb|CBK95449.1| glycyl-tRNA synthetase [Eubacterium siraeum 70/3]
          Length = 458

 Score = 87.9 bits (216), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 52/335 (15%), Positives = 105/335 (31%), Gaps = 46/335 (13%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    F +  ++  +++P  +A+ G  +RNE +
Sbjct: 147 FNLMFKTFQGVTEDSKSELYLRPETAQGIFVNFMNIQRTTRKKVPFGVAQVGKSFRNEIT 206

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              + + RVR F Q +   FC      +      +         G  +  ++L    ++ 
Sbjct: 207 PG-NFIFRVREFEQMELEFFCKPGTDLDWFYFWKDYCKKWLLSLGINEENLRLRDHDQEE 265

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           +     +  A                         G G  +G   +    D        G
Sbjct: 266 L---CFYSKATT---------------DFEYLFPFGWGELWGVA-DRTDYDLTQHIKTSG 306

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK----------- 543
                      F+       +EK  P +I     G    F+ ++ E +            
Sbjct: 307 ------QKMEYFD----PETNEKYVPYVIE-PSLGVERLFLAVITEAYDEEQLEDGTTRN 355

Query: 544 -GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
             +   +L+P++A V  ++    + A EIA+ L  +   ++ D     I  + R      
Sbjct: 356 VMHFHPYLAPVKAAVLPLSKKLADKAGEIADELSKYFC-VDYDDAGA-IGKRYRRQDEIG 413

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
            P  I        +  + +R   S   +++ + D 
Sbjct: 414 TPFCITYDFDSVEDGCVTVRERDSMKQERMPIADV 448


>gi|293400671|ref|ZP_06644816.1| glycine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291305697|gb|EFE46941.1| glycine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 460

 Score = 87.9 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 52/340 (15%), Positives = 114/340 (33%), Gaps = 43/340 (12%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+              T  L+P    G    F +  +S  ++LP  + + G  +RNE +
Sbjct: 148 FNLMFKTFQGILEDSKNTIYLRPETAQGMFVNFKNVQRSMRKKLPFGIGQIGKSFRNEIT 207

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              + + R R F Q +   FC             N  +    D G +   ++      + 
Sbjct: 208 PG-NFIFRTREFEQMELEFFCQPGTDLEWYEYYKNYCMKFLTDLGVDPEHLRFRDHTPEE 266

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           +   A +             I+ +   +I  G L G       + +Y LK          
Sbjct: 267 L---AFYSKGTC-------DIEYNFHSQIGWGELWGIA----DRTDYDLK---------- 302

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK----------- 543
                    S+ +  Y++  + + +         G     +  + + +            
Sbjct: 303 ----QHQEASKKSLEYLDPTTNEKYLPYCVEPAVGVERLMLAFLCDAYDEEELENDTRIV 358

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
            +L  +L+PI+A +T ++    E   E+  +L +   + + D    +I  + R +     
Sbjct: 359 MHLHPFLAPIKACITPLSKKLSEKGMEVFQML-APVANCDYDDAG-SIGKRYRRNDAIGT 416

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           P  I    +   +  + +R   +   ++V+L D +  + +
Sbjct: 417 PFCITVDFETEQDNCVTVRERDTMKQERVNLNDLVSYIEE 456


>gi|329766758|ref|ZP_08258301.1| glycyl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
 gi|329137013|gb|EGG41306.1| glycyl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
          Length = 485

 Score = 87.9 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 65/350 (18%), Positives = 131/350 (37%), Gaps = 26/350 (7%)

Query: 319 FAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR-ELPVRLAEFGSVYRNEPSGSL 377
           F +        +     L+P  C      F    K+ R +LP+ +A+ G  +RNE S   
Sbjct: 142 FNMMFKVGIGPEEEEAYLRPETCQSIFVDFPRLYKTMRGKLPLGIAQVGKSFRNEISPR- 200

Query: 378 HGLMRVRGFTQDDAHVFCTKEQM--FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
             L+R+R F Q +  VFC   ++    +  +I N II I  D     +  K +       
Sbjct: 201 QSLLRLREFYQAEIEVFCNPNKLDEIEKFREIENAIIRIQTDAEIIPMTCKKAVESGVVP 260

Query: 436 GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG-PKFEYILKDAIG-RDWQC 493
                +  A  I+    +             +   E AFY    F++ ++  IG  +   
Sbjct: 261 NKFVAYYLA--ILTEFYEKTGIDITKSRFRKLGEKEKAFYAQVAFDFEVETTIGWLELVA 318

Query: 494 GTIQVDFNL---PSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----- 545
              + D++L    ++    +    +E+     +     G I+R +  ++E+   +     
Sbjct: 319 CNYRSDYDLSSHANKSKEKFEVMDNEEKVLPHVFEISMG-IDRSLYTILEHSLIDDKEHE 377

Query: 546 -----LPLWLSPIQAIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
                +  +L+P+   V ++       E   EI   LK     +  D     I  + R  
Sbjct: 378 RVVLSIKPYLAPVHVGVLSLIKKDGLKEKTDEIYLSLKRK-YDVFLDHSGA-IGRRYRRL 435

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
                P  +    +   ++++ IR+  S + +++ + D   +++KE+  P
Sbjct: 436 DEIGAPFAVTVDYQSFEDQTVTIRKRDSMSQERIKIDDIDSVISKETAFP 485


>gi|313678636|ref|YP_004056376.1| glycine--tRNA ligase [Mycoplasma bovis PG45]
 gi|312950688|gb|ADR25283.1| glycine--tRNA ligase [Mycoplasma bovis PG45]
          Length = 458

 Score = 87.9 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 54/336 (16%), Positives = 113/336 (33%), Gaps = 45/336 (13%)

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR-ELPVRLAEFGSVYRNEP 373
           + N+           +     L+P    G    F + L+S R +LP+ + + G  +RNE 
Sbjct: 146 KFNLMFETKQGIIEGEKNLIYLRPETAQGIFVNFKNVLRSTRAKLPIGIGQVGKSFRNEV 205

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
           +   + + R R F Q +  VF   +       K            G +   V++    + 
Sbjct: 206 TPG-NFIFRTREFEQMELEVFHDPKDSDFLFNKYLYKAKDFATLLGIKDENVRIRAHEQD 264

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
            +   + +  A + ++                G LLG       + ++ LK         
Sbjct: 265 EL---SHYSSATSDIE---------YLFPFGWGELLGVAN----RTDFDLKA-------- 300

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK---------- 543
             +Q        F+       + K  P +I     G     + ++I+++           
Sbjct: 301 -HMQATGESLEYFDPVT----NSKLIPFVIE-PSIGLDRLMLALLIDSYDEEAISENDSR 354

Query: 544 --GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
               +P  ++P +  +  +     + A+EI   L   +++I  D    +I  + R     
Sbjct: 355 IVLRMPKSVAPYKFAILPLVKKLNDKAEEIYKELLKLNIAITYDDAG-SIGKRYRRQDSI 413

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
             P  I       ++  I IR   S   +++S+ + 
Sbjct: 414 GTPYCITVDYDSLNDECITIRNRDSMLQERISISEL 449


>gi|149370984|ref|ZP_01890579.1| glycyl-tRNA synthetase [unidentified eubacterium SCB49]
 gi|149355770|gb|EDM44328.1| glycyl-tRNA synthetase [unidentified eubacterium SCB49]
          Length = 513

 Score = 87.9 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 72/482 (14%), Positives = 149/482 (30%), Gaps = 47/482 (9%)

Query: 173 LYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELT 232
           +Y       L     +  T                   DS +   +      +  + E  
Sbjct: 57  VYMHQNIVGLDASILMHPTTWKASGHVDAFSDPLIDNKDSKKRYRADTLVEDFAEKLEQK 116

Query: 233 QYLYFLEESEKRDHRKLAREMDLFH---IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
                 + ++        R  + F+          V+ +  K  +I   L   +  +   
Sbjct: 117 AQKEIKKAAK--------RFGEAFNEEEFVSTNPRVVGYLSKKAEILTRLARSLESEDLA 168

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRA-NMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
           D  ++   ++        S +W   +  N+        + +      L+P    G    F
Sbjct: 169 D-VKLLIEELEIACPLSGSRNWTEVKQFNLMFGTKLGASAETATDLYLRPETAQGIFVNF 227

Query: 349 NHGLKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK--EQMFNECL 405
            +  K+   ++P  +A+ G  +RNE   +   + R+R F Q +   F     E  +    
Sbjct: 228 LNVQKTGRMKIPFGIAQTGKAFRNEIV-ARQFIFRMREFEQMEMQFFVRPGEEMKWYNHW 286

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
           K + L   +    G E        +      + A  +         L+ I + +   +  
Sbjct: 287 KEYRLNWHLSLGMGKENYRFHDHEKLAHYANAAADIEFNFPFGFKELEGIHSRTDFDLKA 346

Query: 466 GVLLGEGA--FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
                     FY P+         G ++    ++    L   F A + NS  ++      
Sbjct: 347 HEEHSGKKLKFYDPEI--------GENYTPYVVETSIGLDRMFLAVFSNSLMDEKLEDGS 398

Query: 524 HRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIV--TTITSSAVEYAQEIANLLKSHHLS 581
            R V                  LP  L+P++A V          E A+EI   L+    +
Sbjct: 399 SRTVL----------------KLPAVLAPVKAAVFPLVKKDGLPELAKEIIEDLQ-WDHN 441

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           +  D ++  +  + R       P  I    +   ++++ IR   +   ++VS+ D   ++
Sbjct: 442 VFYDEKDA-VGKRYRRQDAAGTPFCITVDHQSLEDKTVTIRHRDTMEQERVSIADLNAVI 500

Query: 642 TK 643
           T 
Sbjct: 501 TN 502


>gi|325107787|ref|YP_004268855.1| glycyl-tRNA synthetase [Planctomyces brasiliensis DSM 5305]
 gi|324968055|gb|ADY58833.1| glycyl-tRNA synthetase [Planctomyces brasiliensis DSM 5305]
          Length = 553

 Score = 87.9 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 58/334 (17%), Positives = 112/334 (33%), Gaps = 41/334 (12%)

Query: 336 LKPMNCPGHVAVFNHGLKSYR-ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           L+P    G    F + + S R +LP  + + G  +RNE +   +   R R F Q +   F
Sbjct: 231 LRPETAQGMFVNFKNVVDSSRVKLPFGICQIGKSFRNEITPR-NFTFRSREFEQMEIEFF 289

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDT 454
           C  ++  N      N     Y D G     ++L    ++        + A   +      
Sbjct: 290 CRPDESANWYQYWRNRRFQWYTDLGIASDKLQLREHHKE--------ELAHYSVGTADIE 341

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKFEYILKDAI-GRDWQCGTIQVDFNLPSRFN------ 507
                    + G L G       + ++ L+  + G+      +Q+D N   +        
Sbjct: 342 YAFPFLSPGDYGELEGVAH----RGDFDLRSHMEGKLDGDLKVQLDENGQPKHRGSGKDL 397

Query: 508 AFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK----------------GNLPLWLS 551
           +++ +   E+  P +I     G+    +  + E +                       L+
Sbjct: 398 SYFDDQARERFVPNVIE-PSAGADRATLAFLCEAYHVDEQPDEKGKMQTRTVLRFHPRLA 456

Query: 552 PIQAIVTTITSSAV--EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIIC 609
           PI+A V  +       E A +I   LK   L+   D +   I  + R       P  I  
Sbjct: 457 PIKAAVFPLIKKEGMPETAAKIYRDLKKAGLTAAYDQQGA-IGRRYRRQDEIGTPYCITV 515

Query: 610 GDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             + A ++++ +R   S    ++ L      +  
Sbjct: 516 DGQTAEDQTVTLRDRDSLEQTRIPLDRVTQEIQD 549


>gi|160915037|ref|ZP_02077250.1| hypothetical protein EUBDOL_01045 [Eubacterium dolichum DSM 3991]
 gi|158432836|gb|EDP11125.1| hypothetical protein EUBDOL_01045 [Eubacterium dolichum DSM 3991]
          Length = 461

 Score = 87.5 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 49/321 (15%), Positives = 110/321 (34%), Gaps = 43/321 (13%)

Query: 335 ALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
            L+P    G    F +  ++  ++LP  + + G  +RNE +   + + R R F Q +   
Sbjct: 168 YLRPETAQGMFVNFKNVQRTMRKKLPFGIGQIGKSFRNEITPG-NFIFRTREFEQMELEF 226

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
           FC      +         +    D G ++  ++      + +   A +            
Sbjct: 227 FCEPGTDLDWYHYYKEFCMKFLTDLGIQREHLRFRDHTPEEL---AFYSKGTC------- 276

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS 513
            I+ +   +I  G L G       + +Y LK                    +   +   +
Sbjct: 277 DIEYNFHSQIGWGELWGIA----DRTDYDLK-------------QHMETSKKSLEYLDPT 319

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIMIENFK-----------GNLPLWLSPIQAIVTTITS 562
            +EK  P  I     G     + +M + +             +   +L+PI+A V  ++ 
Sbjct: 320 TNEKYIPYCIE-PSVGVERMLLAVMCDAYDEEQLENDTRIVMHFHPYLAPIKACVMPLSK 378

Query: 563 SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
              + A E+   + +H  + + D    +I  + R       P  +    +  ++  + +R
Sbjct: 379 KLGDKAMEVYGKI-AHVANCDYDDAG-SIGKRYRRQDAIGTPFCVTIDFETENDGCVTVR 436

Query: 623 RFGSTTTQKVSLLDAIPILTK 643
              S   ++V++ D    + +
Sbjct: 437 HRDSMEQERVAIEDLASYIEE 457


>gi|152977206|ref|YP_001376723.1| glycyl-tRNA synthetase [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|152025958|gb|ABS23728.1| glycyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98]
          Length = 458

 Score = 87.5 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 53/366 (14%), Positives = 111/366 (30%), Gaps = 55/366 (15%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
            E+  P    Q   +          N+        T        L+P    G    F + 
Sbjct: 130 HEVKCPDCGSQEFTEIRQF------NLMFKTFQGVTESSTNEIFLRPETAQGIFVNFKNV 183

Query: 352 LKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
            +S  ++LP  + + G  +RNE +   +   R R F Q +   FC   +           
Sbjct: 184 QRSMRKKLPFGIGQIGKSFRNEITPG-NFTFRTREFEQMELEFFCKPGEELEWFTFWRET 242

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRVGSDAL--WDDAENIMKGVLDTIKNSSQDRINTGVL 468
             +     G  +  ++L        G + L  + +A   +       K         G+ 
Sbjct: 243 CKNWLLSLGMNEDSMRLRDH-----GEEELSHYSNATTDI-----EFKFPFGWGELWGIA 292

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
                    + ++ LK              DFN       +     +E+  P  I     
Sbjct: 293 S--------RTDFDLK------RHMEHSSEDFN-------YIDPQTNERYVPYCIE-PSL 330

Query: 529 GSIERFIGIMIENFKGNLP-----------LWLSPIQAIVTTITSSAVEYAQEIANLLKS 577
           G+    +  + + ++                 L+P +A +  ++    E A+E+   L +
Sbjct: 331 GADRVTLAFLCDAYEEEQLENDSRTVLRFHPALAPYKAAILPLSKKLSEGAREVFAEL-A 389

Query: 578 HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
               ++ D    +I  + R       P  I        ++++ +R   +    ++ + + 
Sbjct: 390 KDFMVDYDETG-SIGKRYRRQDEIGTPFCITYDFDSVEDKAVTVRDRDTMEQVRMPISEL 448

Query: 638 IPILTK 643
              L K
Sbjct: 449 KSFLEK 454


>gi|229496630|ref|ZP_04390344.1| glycyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406]
 gi|229316527|gb|EEN82446.1| glycyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406]
          Length = 518

 Score = 87.5 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 63/387 (16%), Positives = 129/387 (33%), Gaps = 57/387 (14%)

Query: 277 QTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDS---YRANMFAVKCADDTIKDLRT 333
           +TL  + +    +D E I T  +  + +   SG  +     + N+        T      
Sbjct: 152 ETLERFSKALNDNDLEAIRTIIIDKKIVCPISGTCNWTEVRQFNLMFATEMGSTADGASK 211

Query: 334 FALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
             L+P    G    + +  K+   +LP  +A+ G  +RNE   +   + R+R F Q +  
Sbjct: 212 IYLRPETAQGIFVNYLNVQKTGRMKLPFGIAQIGKAFRNEIV-ARQFIFRMREFEQMEMQ 270

Query: 393 VFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKG 450
            F     E  + E  K   +        G  K       +           + A +I   
Sbjct: 271 FFVAPGEEMKWFEYWKKTRMAFHKSLGLGDNKYRYHDHEKLAHYA------NAATDI--- 321

Query: 451 VLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFY 510
                    +  +  G    EG      ++      + R  +    ++ +  P       
Sbjct: 322 ---------EYEMPFGFKEVEGIHSRTNYD------LSRHEEFSGKKLRYFDPQT----- 361

Query: 511 VNSHSEKCHPVMIHRAVFGSIERFIGIM--------IENFKGNL----PLWLSPIQAIVT 558
                E   P ++  ++ G    F+ +M         EN +       P  L+PI+  V 
Sbjct: 362 ----GESYIPYVVETSI-GVDRLFLSLMCGAYCEEPTENGEMRTVLRLPAALAPIKLAVL 416

Query: 559 TI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASE 616
            +       E A+E+   L+    + + D ++ +I  + R       P  I   ++   +
Sbjct: 417 PLVRKDGLDEKAREVVRELR-FDFTCQYDEKD-SIGKRYRRQDAIGTPYCITIDNQTMED 474

Query: 617 RSIGIRRFGSTTTQKVSLLDAIPILTK 643
            ++ IR   +    +V++ D    + +
Sbjct: 475 NTVTIRERDTMEQHRVAITDLRKEIAQ 501


>gi|291546836|emb|CBL19944.1| glycyl-tRNA synthetase, dimeric type [Ruminococcus sp. SR1/5]
          Length = 464

 Score = 87.5 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 45/382 (11%), Positives = 111/382 (29%), Gaps = 60/382 (15%)

Query: 277 QTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFAL 336
           + ++ +++        E+  P     +          ++      + A +T+       L
Sbjct: 124 EKMMDFIKEH------EVGCPSCGKHNFTDIRQFNLMFKTFQGVTEDAKNTV------YL 171

Query: 337 KPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC 395
           +P    G    F +  + S +++P  + + G  +RNE +   +   R R F Q +   FC
Sbjct: 172 RPETAQGIFVNFKNVQRTSRKKIPFGIGQIGKSFRNEITPG-NFTFRTREFEQMELEFFC 230

Query: 396 TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTI 455
             +             +      G +   V+     ++ +   + +  A   +   L   
Sbjct: 231 EPDTDLEWFAYWKKFCLDWLSALGLKDDEVRYRDHDKEEL---SFYSKATTDV-EFLFPF 286

Query: 456 KNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS 515
                  I       +   Y                            S  +  Y +   
Sbjct: 287 GWGELWGI------ADRTDYDLT--------------------QHQNVSGQDLTYFDDEK 320

Query: 516 EKCHPVMIHRAVFGSIERFIGIMIENFKGNLP--------------LWLSPIQAIVTTIT 561
           ++ +   +     G+    +  +   +   +                 L+P++  V  ++
Sbjct: 321 KQKYIPYVIEPSLGADRMVLAFLCSAYDEEVLDAEKNDVRTVLHFHPVLAPVKIGVLPLS 380

Query: 562 SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
               E A++I   L     + E D R   I  + R       P  I    +  ++ ++ +
Sbjct: 381 KKLNEGAEKIYQQLSKK-YNCEYDDRGN-IGKRYRRQDEIGTPFCITYDFESENDGAVTV 438

Query: 622 RRFGSTTTQKVSLLDAIPILTK 643
           R   +    +V + +       
Sbjct: 439 RDRDTMEQVRVKIDELDAYFAD 460


>gi|291543338|emb|CBL16447.1| glycyl-tRNA synthetase [Ruminococcus sp. 18P13]
          Length = 459

 Score = 87.5 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 58/344 (16%), Positives = 111/344 (32%), Gaps = 51/344 (14%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    F +  ++  +++P  +A+ G  +RNE +
Sbjct: 147 FNLMFKTFQGVTEDSKSELYLRPETAQGIFVNFANIQRTTRKKIPFGVAQVGKSFRNEIT 206

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
              + + RVR F Q +   FC    +  + +  +       +      E + ++     E
Sbjct: 207 PG-NFIFRVREFEQMELEFFCKPGTDLEWFDYWRSFCKNWLLSLHIKEENLRLRDHDPEE 265

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
               S A  D                           G G  +G   +    D       
Sbjct: 266 LCFYSKATTD--------------------FEYLFPFGWGELWGVA-DRTDYDLNQHIKT 304

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK--------- 543
            G  Q+D+  P           +E+  P +I     G    F+ ++ E +          
Sbjct: 305 SGK-QLDYFDPET---------NERYVPYVIE-PSLGVERLFLALLTEAYDEEEIAPGDV 353

Query: 544 ---GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
               +    L+P +A V  ++    E A E+  +L  H   ++ D    +I  + R    
Sbjct: 354 RTVMHFHPALAPFKAAVLPLSKKLSEKATEVYEMLAKHFP-VDYDESG-SIGKRYRRQDE 411

Query: 601 KKIPIIIICGDKEAS-ERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              P  I         +  + IR   +   ++V++ D +  L K
Sbjct: 412 IGTPFCITYDFDTLEKDNCVTIRDRDTMEQERVAISDLVAYLEK 455


>gi|146296961|ref|YP_001180732.1| glycyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
 gi|145410537|gb|ABP67541.1| glycyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
          Length = 434

 Score = 87.5 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 67/450 (14%), Positives = 146/450 (32%), Gaps = 91/450 (20%)

Query: 251 REMDLFHIAED---GSGVIFWHRKGWKIFQTLISYMRR---KIKDDYEEINTPQVLDQHL 304
           R   +F  +E     +    +   G ++   +     +   +++DD   +++  +++  +
Sbjct: 13  RRGFIFQSSEIYGGLNSCWDYGPLGVEMKNNIKRLWWKANVQLRDDVVGLDSSILMNPKV 72

Query: 305 WQQSGHWDSYRANMFAVKCADDTIK----------------------------------- 329
           W+ SGH  ++   M   K      +                                   
Sbjct: 73  WEASGHLSNFADPMADCKVCKKRWRADQLSEYKCPECGGELTEARMFNLMFKTFMGPVED 132

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQ 388
           +     L+P    G    F +  ++  ++LP  +A+ G  +RNE +   + + R R F Q
Sbjct: 133 ESAVVYLRPETAQGIFVNFLNVQQTMRKKLPFGIAQIGKSFRNEITPG-NFIFRTREFEQ 191

Query: 389 DDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIM 448
            +   F                 I+ Y   G +K  +++        G D L   A+  +
Sbjct: 192 MEIEYFVKPGTDEYWHKHWIEQRINWYYKLGIKKENIRIREH-----GKDELAHYAKACV 246

Query: 449 K-GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFN 507
               L  +  S  + I                      A   D+     Q         N
Sbjct: 247 DIEYLFPMGWSELEGI----------------------ANRTDFDLSRHQEYSGQ----N 280

Query: 508 AFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP------------LWLSPIQA 555
             Y +  +++ +   +     G    F+  +++ ++                  ++P++A
Sbjct: 281 LTYFDDETKQRYIPYVIEPSAGVDRSFLAFLVDAYENQKIDENDSRIVLHLHPAIAPVKA 340

Query: 556 IVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
            V  +      V+ A+EI N LK   + ++ D    +I  + R       P  I    + 
Sbjct: 341 GVFPLLKREELVKKAKEIYNNLKYKWI-VQYDESG-SIGKRYRRQDEIGTPFGITVDYQT 398

Query: 614 ASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             + ++ IR   +    +V + + IP L +
Sbjct: 399 LEDNTVTIRDRDTMEQVRVHIEEIIPYLEE 428


>gi|182420049|ref|ZP_02951283.1| glycyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237669522|ref|ZP_04529502.1| glycine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262]
 gi|182376086|gb|EDT73673.1| glycyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237654966|gb|EEP52526.1| glycine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262]
          Length = 463

 Score = 87.1 bits (214), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 51/344 (14%), Positives = 111/344 (32%), Gaps = 50/344 (14%)

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEP 373
           + N+        T        L+P    G    F    + S +++P  +A+ G  +RNE 
Sbjct: 151 KFNLMFKTFQGVTEDAKSEMYLRPETAQGIFVNFKAVQRTSRKKVPFGIAQIGKSFRNEI 210

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP 431
           +   +   R R F Q +   FC    +  +++  K +     +  +   E + ++     
Sbjct: 211 TPG-NFTFRTREFEQMELEFFCKPGTDLEWHKYWKDYCWNFLLNLNVKPENLRMRDHGEE 269

Query: 432 EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDW 491
           E    S+A  D                    I      G G  +G   +    D      
Sbjct: 270 ELSFYSNATSD--------------------IEYLFPFGWGELWGIA-DRTDYDLNKHQE 308

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK-------- 543
             G            +  Y++  + + +   +     G+    +  +IE +         
Sbjct: 309 HSGQ-----------DLSYLDQTTNEKYIPYVIEPSLGADRVALAFLIEAYDEEELEGGD 357

Query: 544 ----GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
                +L   L+P +A +  ++    E A E+   L     +++ D    +I  + R   
Sbjct: 358 SRTVMHLHPALAPFKAAILPLSKKLSERALEVYADLSKK-FNLDFDETG-SIGKRYRRQD 415

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
               P  I    +   + ++ IR   +   +++ + +    + K
Sbjct: 416 EIGTPYCITIDFETLEDEAVTIRNRDTMEQERIKISELESYIQK 459


>gi|291320191|ref|YP_003515452.1| glycyl tRNA synthetase [Mycoplasma agalactiae]
 gi|290752523|emb|CBH40495.1| Glycyl tRNA synthetase (Glycine tRNA ligase) [Mycoplasma
           agalactiae]
          Length = 458

 Score = 87.1 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 72/477 (15%), Positives = 157/477 (32%), Gaps = 55/477 (11%)

Query: 187 HVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEK-RD 245
           H+++TG V +  ++       W       +L       W  +   +++  FL +S+   +
Sbjct: 14  HLKATGFVFQGSEIYGGLANTWDYGPLGSLLKENIKDLWKKEFIYSEHNNFLIDSKILMN 73

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIF-QTLISYMRRKIKDDYEEINTPQ---VLD 301
            +       + +  +           G +     +I  +   +  +           V +
Sbjct: 74  PKVWVTSGHVSNFNDPLIENKV---NGKRYRADKIIQEIDSSLIPEAMTFKQMHEYLVKN 130

Query: 302 QHLWQQSG-HWDSYR-ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR-EL 358
              +  S  +W   R  N+           +     L+P    G    F + L+S R +L
Sbjct: 131 VTEYDNSKCNWSEIRKFNLMFETKQGIIEGEKSLIYLRPETAQGIFVNFKNVLRSTRAKL 190

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P+ + + G  +RNE +   + + R R F Q +  VF   +   +   K  N   +     
Sbjct: 191 PIGIGQVGKSFRNEVTPG-NFIFRTREFEQLELEVFHDPKDSESIFNKYLNKCKTFANLV 249

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
           G +   +++    +  +   + +  A + ++                G LLG       +
Sbjct: 250 GIKDENIRIRAHEQDEL---SHYSSATSDIE---------YLFPFGWGELLGVAN----R 293

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            ++ LK           +Q        F+       + K  P +I     G     + ++
Sbjct: 294 TDFDLKA---------HMQATGESLEYFDPVT----NSKLIPYVIE-PSMGLDRLMLALL 339

Query: 539 IENFK------------GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF 586
           I+++               +P  ++P +  +  +     E A+EI   L   ++ I  D 
Sbjct: 340 IDSYDEELVSENDTRIVLKVPNAVAPYKFAILPLVKKLNEKAEEIYKQLLKLNIPITYDD 399

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              +I  + R       P  I       ++  I IR   S + +++S+        K
Sbjct: 400 AG-SIGKRYRRQDSIGTPYCITIDYDSLNDECITIRNRDSMSQERISISSLYEFAQK 455


>gi|71894465|ref|YP_278573.1| glycyl-tRNA synthetase [Mycoplasma synoviae 53]
 gi|123747937|sp|Q4A5V9|SYG_MYCS5 RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|71851253|gb|AAZ43862.1| glycyl-tRNA synthetase [Mycoplasma synoviae 53]
          Length = 451

 Score = 87.1 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 51/374 (13%), Positives = 116/374 (31%), Gaps = 46/374 (12%)

Query: 281 SYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
             + +   +  +E     V      + +      + N+             +   L+P  
Sbjct: 111 ENVAKMTHEQMQEFLQKNVTSYDNSKCAWSEIK-KFNLMFETFQGVVDDKKKAIYLRPET 169

Query: 341 CPGHVAVFNHGLKSYR-ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQ 399
             G    F +  ++ R +LP  +A+ G  +RNE +   + + R R F Q +   F  +E 
Sbjct: 170 AQGIFINFKNIQRAMRAKLPFGVAQVGKSFRNEVTPG-NFIFRTREFEQMELEFFFDEET 228

Query: 400 MFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSS 459
             +   ++ N         G  K  +K+    ++ +   A +  A   +           
Sbjct: 229 PNSYFDELVNKSYDFMLKLGLSKNNLKVRKHDQEEL---AHYSKATVDL----------- 274

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
           +     G     G  +   F+         +                   Y++ ++ K  
Sbjct: 275 EYNFPFGWGELMGIAHRGNFDLSTHSKFSNE----------------KLEYLDPNTNKKL 318

Query: 520 PVMIHRAVFGSIERFIGIMIENFK------------GNLPLWLSPIQAIVTTITSSAVEY 567
              +     G     + I+ E +               L   LSP +  +  +       
Sbjct: 319 IPSVIEPSVGLDRLMLAILCEAYSEEKVSESDTRLVLKLDKKLSPYKVAILPLIKKFNPK 378

Query: 568 AQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGST 627
           A EI + L   ++S+  D    +I  + R          +   ++   + ++ +R   S 
Sbjct: 379 ANEIYSYLIDKNISVTFDESA-SIGKRYRRQDAIGTYYCLTVDEQSLEDNTVTLRDRDSM 437

Query: 628 TTQKVSLLDAIPIL 641
             ++++  D +  L
Sbjct: 438 QQERINFKDILKFL 451


>gi|225027257|ref|ZP_03716449.1| hypothetical protein EUBHAL_01513 [Eubacterium hallii DSM 3353]
 gi|224955410|gb|EEG36619.1| hypothetical protein EUBHAL_01513 [Eubacterium hallii DSM 3353]
          Length = 462

 Score = 87.1 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 45/323 (13%), Positives = 103/323 (31%), Gaps = 22/323 (6%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPS 374
            N+        T     T  L+P    G    F +  + S +++P  + + G  +RNE +
Sbjct: 151 FNLMFKTFQGVTEDAKNTVYLRPETAQGIFVNFKNVARTSRKKIPFGIGQIGKSFRNEIT 210

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              +   R R F Q +   FC  +          +  ++  KD G +   +++    ++ 
Sbjct: 211 PG-NFTFRTREFEQMELEFFCKPDTDLEWFAYWKDFCVNWLKDLGLKDEELRIRDHDKEE 269

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           +   + +  A + +   L          I       +   Y             ++    
Sbjct: 270 L---SFYSKATSDI-EFLFPFGWGELWGI------ADRTDYDLNC--------HQEVSGQ 311

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQ 554
            +    +   +    YV   S     V +        E  I         +    ++P++
Sbjct: 312 DLTYFDDAEKKKYIPYVIEPSLGADRVTLAFLCAAYDEEEIKDGETRNVMHFHPAIAPVK 371

Query: 555 AIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
             +  ++    E A++I + L     + E D R   I  + R       P  +       
Sbjct: 372 VGILPLSKKLNEGAEKIYHELSKI-YNCEFDDRGN-IGKRYRRQDEIGTPYCVTYDFDSV 429

Query: 615 SERSIGIRRFGSTTTQKVSLLDA 637
            + ++ +R   +   +++ + D 
Sbjct: 430 EDGAVTVRDRDTMEQERIKIEDL 452


>gi|115968862|ref|XP_001175779.1| PREDICTED: similar to mitochondrial ribosomal protein L39
           [Strongylocentrotus purpuratus]
          Length = 254

 Score = 87.1 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 46/228 (20%), Positives = 90/228 (39%), Gaps = 17/228 (7%)

Query: 28  ESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPR---SLAVIRHSCAHIMAE 83
              + +  K++    +NG+   +  P+  +  + +IT +D     +      SC+ +MA 
Sbjct: 16  RHFNETYMKRSAIALVNGQPWHMLQPLTEDCELRLITMKDDEPTEANKAFWRSCS-LMAG 74

Query: 84  AVQSIWPEVQVAIGP------IIEDGFY-YDFDKEQPF--SSDELAQIEKKMQEIIARDS 134
           A+     +  V I P       +  G + YD +    +  S +EL  + +   E+  +  
Sbjct: 75  AILQSAFKTDVYIQPVRAADIPVSQGCFAYDVNLPFQWEPSQEELTSLSRLSYELAEKKL 134

Query: 135 PFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQV 194
           PF +  +    A E+F+     YKV  L S+ A   + L+R G++ D  +GP V ++G +
Sbjct: 135 PFERIEVRPSVAMEIFK--DNEYKVAELNSMDAD-RLVLFRLGQFIDTSQGPLVANSGFM 191

Query: 195 KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
                             +   L+R  G A         + + L +  
Sbjct: 192 VPHRYSFTCVHQIDDHLKSGNQLTRFQGVALPGDFPCHYHTWNLIQDR 239


>gi|187934816|ref|YP_001884426.1| glycyl-tRNA synthetase [Clostridium botulinum B str. Eklund 17B]
 gi|187722969|gb|ACD24190.1| glycine--tRNA ligase [Clostridium botulinum B str. Eklund 17B]
          Length = 463

 Score = 87.1 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 55/344 (15%), Positives = 111/344 (32%), Gaps = 50/344 (14%)

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEP 373
           + N+        T        L+P    G    F    +S  +++P  +A+ G  +RNE 
Sbjct: 151 KFNLMFKTFQGVTEDAKSEIYLRPETAQGIFVNFKAVQRSSRKKVPFGIAQIGKSFRNEI 210

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP 431
           +   +   R R F Q +   FC    +  +++  K +     +  +   E + ++     
Sbjct: 211 TPG-NFTFRTREFEQMELEFFCKPGTDLEWHKYWKDYCWNFLLNLNVKTENLRMRDHGEE 269

Query: 432 EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDW 491
           E    S+A  D                    I      G G  +G       +       
Sbjct: 270 ELSFYSNATSD--------------------IEYLFPFGWGELWG----IADRTDYDLKK 305

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK-------- 543
                  D N           +++EK  P +I     G+    +  +IE +         
Sbjct: 306 HQEHSGQDLNYLD-------QTNNEKYIPYVIE-PSLGADRVTLAFLIEAYDEEELDGGD 357

Query: 544 ----GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
                +L   L+P +A +  ++    E A E+ + L     +I+ D    +I  + R   
Sbjct: 358 SRTVLHLHPALAPFKAAILPLSKKLSENALEVYSSLSKK-FNIDFDETG-SIGKRYRRQD 415

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
               P  I        ++ + IR   +   +++ + +    + K
Sbjct: 416 EIGTPYCITVDFDTLEDQCVTIRNRDTMEQERIKISELEAYIEK 459


>gi|167767684|ref|ZP_02439737.1| hypothetical protein CLOSS21_02219 [Clostridium sp. SS2/1]
 gi|167710701|gb|EDS21280.1| hypothetical protein CLOSS21_02219 [Clostridium sp. SS2/1]
 gi|291560818|emb|CBL39618.1| glycyl-tRNA synthetase, dimeric type [butyrate-producing bacterium
           SSC/2]
          Length = 462

 Score = 87.1 bits (214), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 46/376 (12%), Positives = 125/376 (33%), Gaps = 30/376 (7%)

Query: 271 KGWKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTI 328
            G +I  ++ ++ + +++   +  ++  P    ++  +       ++      + A +T+
Sbjct: 110 HGMEIEGSVDAWSKEEMESFINEHDVVCPTCGKKNFTEIRQFNLMFKTFQGVTEDAKNTV 169

Query: 329 KDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
                  L+P    G    F +  + S +++P  + + G  +RNE +   +   R R F 
Sbjct: 170 ------YLRPETAQGIFVNFKNVQRTSRKKIPFGIGQIGKSFRNEITPG-NFTFRTREFE 222

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENI 447
           Q +   FC  ++         N  I+  +  G ++  +++    ++ +   + +  A + 
Sbjct: 223 QMELEFFCEPDKDLEWFEYWKNYCINWLQTLGIKEDEMRVRDHEKEEL---SHYSKATSD 279

Query: 448 MKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFN 507
           +                 G+   +   Y        ++  G D        D     R+ 
Sbjct: 280 I-----EFMFPFGWGELWGI--ADRTDYDLT---QHQNTSGEDLT----YFDDVNKERYI 325

Query: 508 AFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEY 567
            + +          +         E   G        +    L+P++  +  ++    + 
Sbjct: 326 PYVIEPSLGADRVTLAFLCSAYDEEELEGGDT-RTVLHFHPALAPVKIGILPLSKKLSDG 384

Query: 568 AQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGST 627
           A ++   L +   + E D R   I  + R       P  +        + ++ +R   + 
Sbjct: 385 AMKVYEEL-AKEYNCEFDERGN-IGKRYRRQDEIGTPYCVTFDFDSLEDGAVTVRDRDTM 442

Query: 628 TTQKVSLLDAIPILTK 643
             ++V + D      +
Sbjct: 443 EQERVKIEDLKAYFAE 458


>gi|153952826|ref|YP_001393591.1| glycyl-tRNA synthetase [Clostridium kluyveri DSM 555]
 gi|219853491|ref|YP_002470613.1| hypothetical protein CKR_0148 [Clostridium kluyveri NBRC 12016]
 gi|254781876|sp|B9DY74|SYG_CLOK1 RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|254781877|sp|A5N4L2|SYG_CLOK5 RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|146345707|gb|EDK32243.1| GlyS [Clostridium kluyveri DSM 555]
 gi|219567215|dbj|BAH05199.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 463

 Score = 87.1 bits (214), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 51/346 (14%), Positives = 109/346 (31%), Gaps = 51/346 (14%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    F +  + S +++P  +A+ G  +RNE +
Sbjct: 152 FNLMFKTFQGVTEDSKAEIYLRPETAQGIFVNFKNVQRTSRKKIPFGIAQIGKAFRNEIT 211

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
              +   R R F Q +   FC    +  ++   K +     +      E I  ++  + E
Sbjct: 212 PG-NFTFRTREFEQMELEFFCEPGTDLEWHNYWKEYCWKFLLKLGIKEENIRFRVHEKEE 270

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
               S+A  D                    I      G G  +G             D  
Sbjct: 271 LSHYSNATSD--------------------IEYLFPFGWGELWGIA-----------DRT 299

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK--------- 543
              +    N   +   +     +E+  P  I     G+    +  +++ +          
Sbjct: 300 DYDLTQHQNRSGKDMTYLNPVTNERYIPYCIE-PSVGADRAVLAFLVDAYDEEELEGGDV 358

Query: 544 ---GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
               +    ++P +  +  ++    E A ++ N+L+    +++ D    +I  + R    
Sbjct: 359 RTVMHFHPAIAPFKVAILPLSKKLSEKALDVYNMLRK-DFNVDYDDAG-SIGKRYRREDE 416

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
              P  I          ++ IR   +    +V + + +    KE +
Sbjct: 417 IGTPYCITIDFDTMDNDTVTIRDRDTMKQFRVKIDE-LKDFIKEKI 461


>gi|322381604|ref|ZP_08055577.1| hypothetical protein PL1_0791 [Paenibacillus larvae subsp. larvae
           B-3650]
 gi|321154440|gb|EFX46743.1| hypothetical protein PL1_0791 [Paenibacillus larvae subsp. larvae
           B-3650]
          Length = 456

 Score = 86.8 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 52/340 (15%), Positives = 99/340 (29%), Gaps = 48/340 (14%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    F +  ++  ++LP  + + G  +RNE +
Sbjct: 145 FNLMFKTHQGVTASSTNEIYLRPETAQGIFVNFKNVQRTMRKKLPFGIGQIGKSFRNEIT 204

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
              +   R R F Q +   FC   E +            +     G ++  ++L      
Sbjct: 205 PG-NFTFRTREFEQMELEFFCKPGEDLEWFSY-WREFCRNWLLSLGMKEANMRLRDHD-- 260

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
                          K  L    N++ D I      G G  +G             +   
Sbjct: 261 ---------------KEELSHYSNATSD-IEYKFPFGWGELWGIADRTDFDLIRHMEHSG 304

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI------ENFKG--- 544
                                 EK  P  I     G+    +  +I      E   G   
Sbjct: 305 EDFHFHDQ-----------ETGEKYVPYCIE-PSLGADRVTLAFLINAYEEQELDGGDSR 352

Query: 545 ---NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
              +    ++P++A +  ++    E A ++   L S    +E D    +I  + R     
Sbjct: 353 NVLHFHPAIAPVKAAIFPLSKKLAESAGKVFRDL-SQDFMVEYDDAG-SIGKRYRRQDEI 410

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
             P  I        +  + +R   +   Q++ + +    L
Sbjct: 411 GTPFCITYDFDSVEDGQVTVRDRDTMQQQRMPISELKAFL 450


>gi|85057389|ref|YP_456305.1| glycyl-tRNA synthetase [Aster yellows witches'-broom phytoplasma
           AYWB]
 gi|84789494|gb|ABC65226.1| glycyl-tRNA synthetase [Aster yellows witches'-broom phytoplasma
           AYWB]
          Length = 452

 Score = 86.8 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 55/358 (15%), Positives = 106/358 (29%), Gaps = 46/358 (12%)

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRE 357
           ++   +   S        NM         +K+ +   L+P    G    F + LK+  ++
Sbjct: 123 LVKNQVLGTSNWTPIRPFNMLFQTRQGVILKNSKPLYLRPETAQGIFIQFKNILKTTRKK 182

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP  + + G V+RNE +   + + R   F Q +   FC      +       L+      
Sbjct: 183 LPFGVCQIGKVFRNEVTPG-NFIFRTCEFEQMELEFFCQPGTETHWFNHWKKLMYDFLII 241

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
            G     +K     +                  +L   K         G+          
Sbjct: 242 LGMNPQNLKFKDHKK------EDLSHYSKQTCDIL--FKFPWGFDELWGIASR------T 287

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
            F+                       S+ +  Y +  +++     +     G    F   
Sbjct: 288 NFDLK----------------THQKNSKKDLTYFDETTKQKILPYVIEPSLGIERLFFAF 331

Query: 538 MIENFKGN-----------LPLWLSPIQAIVTT-ITSSAVEYAQEIANLLKSHHLSIETD 585
           +I N+  N              +L+P +  V   I       AQEI   L + +  +  D
Sbjct: 332 LINNYHENSTSNETRQILSFHPFLAPYKVAVLPLIKKKHSAKAQEINQYL-AKYFDVCYD 390

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              ++I  + R   +   P  I   D+  +   I +R   +   Q   L +    + +
Sbjct: 391 ET-KSIGKRYRRQDMIGTPFCITVDDQTLTHNIITLRNRDTAQQQTFLLTEVKQYIQE 447


>gi|149040965|gb|EDL94922.1| glutamyl-prolyl-tRNA synthetase, isoform CRA_c [Rattus norvegicus]
          Length = 1460

 Score = 86.8 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 25/168 (14%), Positives = 52/168 (30%), Gaps = 17/168 (10%)

Query: 491  WQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL 550
             +  T        S+                  ++  +G   R IG+MI     N+ L L
Sbjct: 1184 DEGATSHHLGQNFSKMCEIVFEDPKTPGEKQFAYQCSWGLTTRTIGVMIMVHGDNMGLVL 1243

Query: 551  SP----IQAIVTT----------ITSSAVEYAQEIANLLKSHHLSIETDFRNE-TINYKI 595
             P    +Q +V               + +    E    L    +    D R+  +  +K 
Sbjct: 1244 PPRVASVQVVVIPCGITNTLSEEDREALMAKCNEYRRRLLGADIRARVDLRDNYSPGWKF 1303

Query: 596  REHSIKKIPIIIICGDKEASERS-IGIRRFGSTTTQKVSLLDAIPILT 642
                +K +P+ +  G ++      + +R   +     ++  +A   L 
Sbjct: 1304 NHWELKGVPVRLEVGPRDMKSCQFVAVR-RDTGEKLTIAEKEAESKLK 1350



 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 36/188 (19%), Positives = 74/188 (39%), Gaps = 6/188 (3%)

Query: 226  NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
              +Q         EE+    + ++  + ++     D SG        + I++++  +   
Sbjct: 1008 PKKQTRLGLEAKKEENLAEWYSQVITKSEMIEY-YDVSGCYILRPWSYSIWESIKDFFDA 1066

Query: 286  KIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPG 343
            +IK    E    P  + Q   + +  H   +   +  V  +  T       A++P +   
Sbjct: 1067 EIKKLGVENCYFPIFVSQGALEKEKNHIADFAPEVAWVTRSGKTEL-AEPIAIRPTSETV 1125

Query: 344  HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFN 402
                +   ++S+R+LP+RL ++ +V R E        +R R F   + H  F T E+  +
Sbjct: 1126 MYPAYAKWVQSHRDLPIRLNQWCNVVRWEFK-HPQPFLRTREFLWQEGHSAFATFEEAAD 1184

Query: 403  ECLKIHNL 410
            E    H+L
Sbjct: 1185 EGATSHHL 1192


>gi|28209979|ref|NP_780923.1| glycyl-tRNA synthetase [Clostridium tetani E88]
 gi|59798585|sp|Q899G6|SYG_CLOTE RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|28202414|gb|AAO34860.1| glycyl-tRNA synthetase [Clostridium tetani E88]
          Length = 463

 Score = 86.8 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 44/342 (12%), Positives = 109/342 (31%), Gaps = 46/342 (13%)

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEP 373
           + N+        T        L+P    G    F + +++  R++P  +A+ G  +RNE 
Sbjct: 151 KFNLMFKTFQGVTEDAQSEIFLRPETAQGIFVNFKNAIRTTRRKMPFGMAQIGKSFRNEI 210

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
           +   +   R R F Q +   FC             +   +     G  K  ++       
Sbjct: 211 TPG-NFTFRTREFEQMELEFFCKPGTDLEWFEYWRDYSWNFLLSLGLAKDNLR------- 262

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
                        I +   + +   S+  ++   L   G  +G  +    +         
Sbjct: 263 -------------IREHAKEELAFYSKATVDIEYLFPFG--WGELWGIADRTDYDLKQHM 307

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP------ 547
                D          Y++  + + +         G+    +  +++ +           
Sbjct: 308 NHSGKD--------LTYLDPETNEKYLPYCIEPSLGADRVALAFLVDAYDEEELDGGDSR 359

Query: 548 ------LWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
                   L+P +A +  +T    + + E+ ++L  +  +++ D    TI  + R     
Sbjct: 360 TVLRLHPALAPFKAAILPLTKKLKDKSLEVYSMLSKY-FNVDYDEAG-TIGKRYRREDEI 417

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             P  I        + ++ IR   S    ++++ + +  +++
Sbjct: 418 GTPYCITIDYDTLEDNTVTIRDRDSMDQIRINIDELVKYISE 459


>gi|301626886|ref|XP_002942618.1| PREDICTED: threonyl-tRNA synthetase, cytoplasmic-like [Xenopus
           (Silurana) tropicalis]
          Length = 104

 Score = 86.8 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 34/76 (44%), Gaps = 1/76 (1%)

Query: 569 QEIANLLKSHHLSIETD-FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGST 627
            ++  ++      ++ D     T+N KIR+  + +   I++ GDKE    ++ +R   S 
Sbjct: 16  NQVQRMIHDAGFMVDLDTDHGTTLNKKIRKAQVAQYNFILVVGDKEKQNSTVNVRTRDSK 75

Query: 628 TTQKVSLLDAIPILTK 643
              +  L   +  LT+
Sbjct: 76  QHGERELKALLVRLTE 91


>gi|188588755|ref|YP_001919624.1| glycyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43]
 gi|251778464|ref|ZP_04821384.1| glycine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
 gi|188499036|gb|ACD52172.1| glycyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43]
 gi|243082779|gb|EES48669.1| glycine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
          Length = 463

 Score = 86.8 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 56/344 (16%), Positives = 113/344 (32%), Gaps = 50/344 (14%)

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEP 373
           + N+        T        L+P    G    F    +S  +++P  +A+ G  +RNE 
Sbjct: 151 KFNLMFKTFQGVTEDAKSEIYLRPETAQGIFVNFKAVQRSSRKKVPFGIAQIGKSFRNEI 210

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP 431
           +   +   R R F Q +   FC    +  +++  K +     +  +   E + ++     
Sbjct: 211 TPG-NFTFRTREFEQMELEFFCKPGTDLEWHKYWKDYCWNFLLNLNVKTENLRMRDHGEE 269

Query: 432 EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDW 491
           E    S+A  D                    I      G G  +G         A   D+
Sbjct: 270 ELSFYSNATSD--------------------IEYLFPFGWGELWGI--------ADRTDY 301

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK-------- 543
                Q        +      +++EK  P +I     G+    +  +IE +         
Sbjct: 302 DLRKHQEHSGQDLNYLD---QTNNEKYIPYVIE-PSLGADRVTLAFLIEAYDEEELDGGD 357

Query: 544 ----GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
                +L   L+P +A +  ++    E A E+ + L     +I+ D    +I  + R   
Sbjct: 358 SRTVLHLHPALAPFKAAILPLSKKLSENALEVYSNLSKK-FNIDFDETG-SIGKRYRRQD 415

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
               P  I        ++ + IR   +   +++ + +    + K
Sbjct: 416 EIGTPYCITVDFDTLEDQCVTIRNRDTMEQERIKISELEAYIEK 459


>gi|313897385|ref|ZP_07830928.1| glycine--tRNA ligase [Clostridium sp. HGF2]
 gi|312957755|gb|EFR39380.1| glycine--tRNA ligase [Clostridium sp. HGF2]
          Length = 460

 Score = 86.8 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 53/340 (15%), Positives = 111/340 (32%), Gaps = 43/340 (12%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+                 L+P    G    F +  +S  ++LP  + + G  +RNE +
Sbjct: 148 FNLMFKTFQGVVEDAKSAIYLRPETAQGMFVNFKNVQRSMRKKLPFGIGQIGKSFRNEIT 207

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              + + R R F Q +   FC             +  +S   + G     ++      + 
Sbjct: 208 PG-NFIFRTREFEQMELEFFCQPGTDMEWYQYYKDYCMSFLTNLGINSDHLRFRDHTAEE 266

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           +   A +             I+ +   +I  G L G       + +Y LK          
Sbjct: 267 L---AFYSKGTC-------DIEYNFHSQIGWGELWGIA----DRTDYDLK---------- 302

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK----------- 543
                    S+ +  Y++  + + +         G     +  M + +            
Sbjct: 303 ----QHQEASKKSLEYLDPATNEKYLAYCVEPAVGVERLMLAFMCDAYDEEELENDTRIV 358

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
            +L  +L+PI+A V  ++    + A E+  L+     + + D    +I  + R       
Sbjct: 359 MHLHPFLAPIKACVMPLSKKLSDKAMEVFQLIAPVG-NCDYDEAG-SIGKRYRRQDAVGT 416

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           P  I    +  ++  + +R   S   ++VSL D    + +
Sbjct: 417 PFCITVDFETENDNCVTVRHRDSMEQERVSLKDLSAYIEE 456


>gi|118577094|ref|YP_876837.1| glycyl-tRNA synthetase (class II) [Cenarchaeum symbiosum A]
 gi|118195615|gb|ABK78533.1| glycyl-tRNA synthetase (class II) [Cenarchaeum symbiosum A]
          Length = 445

 Score = 86.4 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 63/352 (17%), Positives = 118/352 (33%), Gaps = 31/352 (8%)

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR-ELPVRLAEFGSVYRNEP 373
               F +              L+P  C      F    K+ R  LP+ +A+ G  +RNE 
Sbjct: 99  GTERFNMIFKVGIGPGGEPAYLRPETCQSIFVDFPRIFKTMRGRLPLGIAQVGKSFRNEI 158

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTK----EQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
           S     L+R+R F Q +  VFC      E    E       +    K           S 
Sbjct: 159 SPR-QSLLRLREFYQAEIEVFCNPGKLDEADLAEVAGAVLRVDQGGKTVETGCAEAVESG 217

Query: 430 RPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG-PKFEYILKDAIG 488
               R  +  L   AE   K  +D +  S   R+       E AFY    F++ ++  +G
Sbjct: 218 IIPNRFVAYHLGLLAEFYEKTGID-MGKSRFRRLG----EKEKAFYAEAAFDFEVETTVG 272

Query: 489 -RDWQCGTIQVDFNL---PSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
             +      + D++L     +    +     E+     +     G I+R +  ++E+   
Sbjct: 273 WLELVACNYRSDYDLSAHAKKSGEKFEVMDGEEKVLPHVFEMSMG-IDRSLYTILEHSLR 331

Query: 545 N----------LPLWLSPIQAIVTTITSS--AVEYAQEIANLLKSHHLSIETDFRNETIN 592
                      +  +L+P+   V ++       E   EI   ++        D     I 
Sbjct: 332 EDAENERTVLSVRPYLAPVHVGVLSLVKKGGLREKTDEIHGAIR-RDYDAFLDHSGA-IG 389

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            + R       P+ I    +   + ++ +RR  +    ++ + +   +L+ E
Sbjct: 390 RRYRRLDEIGAPLAITIDHRTLEDGTVTVRRRDTMEQDRIKIDEINGLLSTE 441


>gi|255027747|ref|ZP_05299733.1| prolyl-tRNA synthetase [Listeria monocytogenes FSL J2-003]
          Length = 90

 Score = 86.4 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 23/95 (24%), Positives = 45/95 (47%), Gaps = 6/95 (6%)

Query: 275 IFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           + + + + +R +++     E+  P +    LWQ+SG W+ Y   +  +K      +  R 
Sbjct: 1   MLRKIETIIREELEAIGAAELLMPALQPAELWQESGRWNDYGPELMRLKD-----RASRD 55

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV 368
           FAL P +     A+    +KSY+ LP+ L +  + 
Sbjct: 56  FALGPTHEEVITALLRDEVKSYKRLPLTLYQIQTK 90


>gi|15828922|ref|NP_326282.1| glycyl-tRNA synthetase [Mycoplasma pulmonis UAB CTIP]
 gi|14089865|emb|CAC13624.1| GLYCYL-TRNA SYNTHETASE (GLYCINE--TRNA LIGASE) (GLYRS) [Mycoplasma
           pulmonis]
          Length = 453

 Score = 86.4 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 64/360 (17%), Positives = 121/360 (33%), Gaps = 48/360 (13%)

Query: 293 EINTPQVLDQHLWQQSG-HWDSYRANMFAVKCADDTIKDLRTFAL-KPMNCPGHVAVFNH 350
           EI+   V     ++ S   W   R      + +   ++D +     +P    G    F +
Sbjct: 123 EIHAFIVEHVKEYENSKTSWSEIRKFQLMFQTSQGVVEDSKNLVYLRPETAQGIFINFKN 182

Query: 351 GLKSYR-ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
            L+S R +LP+ + + G  +RNE +   + + R R F Q +  VFC  E+      K  N
Sbjct: 183 ILRSTRAKLPLAVGQVGKSFRNEVTPG-NFIFRTREFEQMELEVFCLPEEAEEIYQKYIN 241

Query: 410 LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL 469
           L      + G  K  ++     +            E +      T           G LL
Sbjct: 242 LCWEFLLELGINKNSIRKRIHQK------------EELAHYSKGTCDYEFNFPFGWGELL 289

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS-HSEKCHPVMIHRAVF 528
           G  A  G   ++ LK+      +              +  Y+N   +++  P +I     
Sbjct: 290 G-IANRG---DFDLKNHSHFSQE--------------DLSYLNPLDNQRIIPYVIE-PSI 330

Query: 529 GSIERFIGIMIENFK-----------GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKS 577
           G     + ++ + +              L   ++P +  V  +     E A+E+   L  
Sbjct: 331 GLDRLMLALLCDAYHEESVENETRVVLKLDKKIAPYRFAVLPLVKKLSEKAKELYKNLVD 390

Query: 578 HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
            +L +  D    +I  + R          I    +   + S  IR   S   +++S  + 
Sbjct: 391 LNLMVSYDESG-SIGKRYRRQDAIGTYECITIDYQSLEDDSFTIRNRDSMEQKRLSFEEL 449


>gi|115768438|ref|XP_784410.2| PREDICTED: similar to mitochondrial ribosomal protein L39, partial
           [Strongylocentrotus purpuratus]
          Length = 237

 Score = 86.4 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 46/226 (20%), Positives = 90/226 (39%), Gaps = 17/226 (7%)

Query: 30  ISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPR---SLAVIRHSCAHIMAEAV 85
            + +  K++    +NG+   +  P+  +  + +IT +D     +      SC+ +MA A+
Sbjct: 1   FNETYMKRSAIALVNGQPWHMLQPLTEDCELRLITMKDDEPTEANKAFWRSCS-LMAGAI 59

Query: 86  QSIWPEVQVAIGP------IIEDGFY-YDFDKEQPF--SSDELAQIEKKMQEIIARDSPF 136
                +  V I P       +  G + YD +    +  S +EL  + +   E+  +  PF
Sbjct: 60  LQSAFKTDVYIQPVRAADIPVSQGCFAYDVNLPFQWEPSQEELTSLSRLSYELAEKKLPF 119

Query: 137 LKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKK 196
            +  +    A E+F+     YKV  L S+ A   + L+R G++ D  +GP V ++G +  
Sbjct: 120 ERIEVRPSVAMEIFK--DNEYKVAELNSMDAD-RLVLFRLGQFIDTSQGPLVANSGFMVP 176

Query: 197 FFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
                           +   L+R  G A         + + L +  
Sbjct: 177 HRYSFTCVHQIDDHLKSGNQLTRFQGVALPGDFPCHYHTWNLIQDR 222


>gi|225548175|ref|ZP_03769460.1| hypothetical protein RUMHYD_00154 [Blautia hydrogenotrophica DSM
           10507]
 gi|225040614|gb|EEG50860.1| hypothetical protein RUMHYD_00154 [Blautia hydrogenotrophica DSM
           10507]
          Length = 464

 Score = 86.4 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 46/343 (13%), Positives = 97/343 (28%), Gaps = 48/343 (13%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPS 374
            N+        T     T  L+P    G    F +  + S ++LP  + + G  +RNE +
Sbjct: 151 FNLMFKTFQGVTEDAKNTVYLRPETAQGIFVNFKNVQRTSRKKLPFGIGQIGKSFRNEIT 210

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              +   R R F Q +   FC  +             +      G ++  V+     ++ 
Sbjct: 211 PG-NFTFRTREFEQMELEFFCEPDTDLEWFAYWKKFCLDWLSSLGLKEDEVRYRDHEKEE 269

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           +   + +  A   +   L          I                      A   D+   
Sbjct: 270 L---SFYSKATTDV-EFLFPFGWGELWGI----------------------ADRTDYDLT 303

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP------- 547
             Q         +  Y +   ++ +   +     G+    +  +   +   +        
Sbjct: 304 QHQNVSGE----DLTYFDDEKKQRYIPYVIEPSLGADRMVLAFLCSAYDEEVLDEEKNDV 359

Query: 548 -------LWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
                    L+P++  V  ++    E A +I   L     + E D R   I  + R    
Sbjct: 360 RTVLHFHPVLAPVKIGVLPLSKKLNEGALKIYEQLSKK-YNCEYDDRGN-IGKRYRRQDE 417

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              P  +        + S+ +R   +    +V + +       
Sbjct: 418 IGTPFCVTYDFDSEEDGSVTVRDRDTMEQVRVKIEELDAYFAD 460


>gi|309775526|ref|ZP_07670526.1| glycine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
 gi|308916620|gb|EFP62360.1| glycine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
          Length = 460

 Score = 86.4 bits (212), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 51/340 (15%), Positives = 111/340 (32%), Gaps = 43/340 (12%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+                 L+P    G    F +  +S  ++LP  + + G  +RNE +
Sbjct: 148 FNLMFKTFQGVVEDAKSAIYLRPETAQGMFVNFKNVQRSMRKKLPFGIGQIGKSFRNEIT 207

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              + + R R F Q +   FC             +  +S   + G     ++      + 
Sbjct: 208 PG-NFIFRTREFEQMELEFFCQPGTDMEWYQYYKDFCMSFLTNLGINSEHLRFRDHTPEE 266

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           +   A +             I+ +   +I  G L G       + +Y LK          
Sbjct: 267 L---AFYSKGTC-------DIEYNFHSQIGWGELWGIA----DRTDYDLK---------- 302

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK----------- 543
                    S+ +  Y++  + + +         G     +  M + +            
Sbjct: 303 ----QHQEASKKSLEYLDPATNEKYLAYCVEPAVGVERLMLAFMCDAYDEEELENDTRIV 358

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
            +L  +L+PI+A V  ++      A E+ +++     + + D    +I  + R       
Sbjct: 359 MHLHPFLAPIKACVMPLSKKLSSKAMEVFSMIAPIG-NCDYDEAG-SIGKRYRRQDAVGT 416

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           P  I    +  ++  + +R   S   ++VSL +    + +
Sbjct: 417 PFCITVDFETENDNCVTVRHRDSMEQERVSLDELSAYIEE 456


>gi|291556422|emb|CBL33539.1| glycyl-tRNA synthetase [Eubacterium siraeum V10Sc8a]
          Length = 458

 Score = 86.4 bits (212), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 52/335 (15%), Positives = 104/335 (31%), Gaps = 46/335 (13%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    F +  ++  +++P  +A+ G  +RNE +
Sbjct: 147 FNLMFKTFQGVTEDSKSELYLRPETAQGIFVNFMNIQRTTRKKVPFGVAQVGKSFRNEIT 206

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              + + RVR F Q +   FC      +      +         G  +  ++L    ++ 
Sbjct: 207 PG-NFIFRVREFEQMELEFFCKPGTDLDWFYFWKDYCKKWLLSLGINEENLRLRDHDKEE 265

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           +     +  A                         G G  +G   +    D        G
Sbjct: 266 L---CFYSKATT---------------DFEYLFPFGWGELWGVA-DRTDYDLTQHIKTSG 306

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK----------- 543
                      F+       +EK  P +I     G    F+ ++ E +            
Sbjct: 307 ------QKMEYFD----PETNEKYVPYVIE-PSLGVERLFLAVITEAYDEEQLEDGTTRN 355

Query: 544 -GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
             +   +L+P++A V  ++      A EIA+ L  +   ++ D     I  + R      
Sbjct: 356 VMHFHPYLAPVKAAVLPLSKKLANKAGEIADELSKYFC-VDYDDAGA-IGKRYRRQDEIG 413

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
            P  I        +  + +R   S   +++ + D 
Sbjct: 414 TPFCITYDFDSVEDGCVTVRERDSMKQERMPIADV 448


>gi|313157062|gb|EFR56492.1| glycine--tRNA ligase [Alistipes sp. HGB5]
          Length = 514

 Score = 86.0 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 60/347 (17%), Positives = 119/347 (34%), Gaps = 55/347 (15%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T +   T  L+P    G    F +  K+   +LP  +A+ G  +RNE  
Sbjct: 194 FNLMFSTQMGSTAEGANTIYLRPETAQGIFVNFLNVQKTGRMKLPFGIAQIGKAFRNEIV 253

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
            +   + R+R F Q +   F     E  + +  K   +       FG ++       +  
Sbjct: 254 -ARQFIFRMREFEQMEMQFFVRPGEEMKWWQAWKETRMAWHRALGFGDDRYRFHDHEKLA 312

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
                    + A +I            +     G    EG      F+        + + 
Sbjct: 313 HYA------NAATDI------------EYNFPFGFKEVEGIHSRTDFDL----GNHQKFS 350

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI-----ENFKG--- 544
              IQ                  E   P ++  ++ G    F+ +M      E  +G   
Sbjct: 351 GRKIQYFD-----------PETGESYVPYVVETSI-GVDRMFLQVMSAAYTEEQLEGGDS 398

Query: 545 ----NLPLWLSPIQAIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
                LP  L+P++  V  +       E AQ+I +LLK +  ++  D ++ ++  + R  
Sbjct: 399 RVVLRLPAALAPVKVAVLPLVKKDGMPEVAQKIVDLLK-YDYNVVYDEKD-SVGKRYRRQ 456

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
                P  +    +   + ++ +R   +   ++V++ D +P L +E 
Sbjct: 457 DAVGTPFCVTVDGQTLEDNTVTVRHRDTMQQERVAI-DKLPALVEEE 502


>gi|226484536|emb|CAX74177.1| putative phospholipid-transporting ATPase IF [Schistosoma
           japonicum]
 gi|226484538|emb|CAX74178.1| putative phospholipid-transporting ATPase IF [Schistosoma
           japonicum]
          Length = 354

 Score = 86.0 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 48/276 (17%), Positives = 91/276 (32%), Gaps = 48/276 (17%)

Query: 3   SDIKLTFPDG----SIKNFPVH-ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-E 56
             IK+T+ DG    S        +T  D A+ +S  L K++V   +N    D++ P+  +
Sbjct: 53  EKIKVTY-DGILGTSALEMTKGISTPLDCAKHLSEMLVKESVIAMVNNTPWDMNRPLTYD 111

Query: 57  GSIEIITPEDPR-----SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIED------GFY 105
             ++ +  +D       + +    SCA ++A  +++ +          +        GF 
Sbjct: 112 CLLDFVQFKDSHIDPTAANSAFWQSCALLLAATLETAFHCKHNVRVISLPSLNPKNGGFV 171

Query: 106 YDFDKEQPF--------SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAY 157
            D               S  EL  +   +Q + A D  F    +S               
Sbjct: 172 CDISFNPTHQSFVNWVPSPQELYALNAYIQRMAADDLSFEPLDVSVSSELLQRLFADNPL 231

Query: 158 KVEIL--------------------ESIPAKENVTLYRQGEWFDLC-RGPHVRSTGQVKK 196
           + + +                      I  +  + +YR G + +    GP +RST  + K
Sbjct: 232 RSQQITQVFNKHQDSGGELELSPNTNEITERSTLPVYRVGNFVECFTDGPLIRSTNLIGK 291

Query: 197 FFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELT 232
                       RG S+  +  R+ G A  +     
Sbjct: 292 ISISSFYRIGRLRGSSSNIVY-RVQGVAIPSAFLTH 326


>gi|56756577|gb|AAW26461.1| SJCHGC06596 protein [Schistosoma japonicum]
          Length = 354

 Score = 86.0 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 48/276 (17%), Positives = 91/276 (32%), Gaps = 48/276 (17%)

Query: 3   SDIKLTFPDG----SIKNFPVH-ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-E 56
             IK+T+ DG    S        +T  D A+ +S  L K++V   +N    D++ P+  +
Sbjct: 53  EKIKVTY-DGILGNSALEMTKGISTPLDCAKHLSEMLVKESVIAMVNNTPWDMNRPLTYD 111

Query: 57  GSIEIITPEDPR-----SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIED------GFY 105
             ++ +  +D       + +    SCA ++A  +++ +          +        GF 
Sbjct: 112 CLLDFVQFKDSHIDPTAANSAFWQSCALLLAATLETAFHCKHNVRVISLPSLNPKNGGFV 171

Query: 106 YDFDKEQPF--------SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAY 157
            D               S  EL  +   +Q + A D  F    +S               
Sbjct: 172 CDISFNPTHQSFVNWVPSPQELYALNAYIQRMAADDLSFEPLDVSVSSELLQRLFADNPL 231

Query: 158 KVEIL--------------------ESIPAKENVTLYRQGEWFDLC-RGPHVRSTGQVKK 196
           + + +                      I  +  + +YR G + +    GP +RST  + K
Sbjct: 232 RSQQITQVFNKHQDSGGELESSPNTNEITERSTLPVYRVGNFVECFTDGPLIRSTNLIGK 291

Query: 197 FFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELT 232
                       RG S+  +  R+ G A  +     
Sbjct: 292 ISISSFYRIGRLRGSSSNIVY-RVQGVAIPSAFLTH 326


>gi|326529007|dbj|BAK00897.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 81

 Score = 86.0 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/83 (43%), Positives = 47/83 (56%), Gaps = 6/83 (7%)

Query: 428 STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAI 487
           STRP+K +G+   W+ AE+ +K  L              +  G+GAFYGPK +  L D  
Sbjct: 2   STRPKKYLGNIEDWNIAEDQLKAALTKFGK------EYKLNEGDGAFYGPKIDVKLFDVF 55

Query: 488 GRDWQCGTIQVDFNLPSRFNAFY 510
           GR+ QCGT Q+DF LP RFN  Y
Sbjct: 56  GREHQCGTCQLDFQLPVRFNLQY 78


>gi|325261980|ref|ZP_08128718.1| glycine--tRNA ligase [Clostridium sp. D5]
 gi|324033434|gb|EGB94711.1| glycine--tRNA ligase [Clostridium sp. D5]
          Length = 463

 Score = 86.0 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 44/341 (12%), Positives = 100/341 (29%), Gaps = 46/341 (13%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPS 374
            N+        T     T  L+P    G    F +  + S +++P  + + G  +RNE +
Sbjct: 152 FNLMFKTFQGVTEDAKNTVYLRPETAQGIFVNFKNVQRTSRKKIPFGIGQIGKSFRNEIT 211

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              +   R R F Q +   FC      +         +      G +   V+     ++ 
Sbjct: 212 PG-NFTFRTREFEQMELEFFCEPGTDLDWFAYWKQFCLDWLSSLGLKDDEVRYRDHDQEE 270

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           +   + +  A   +   L          I       +   Y                   
Sbjct: 271 L---SFYSKATTDV-EFLFPFGWGELWGI------ADRTDYDLT---------------- 304

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK----------- 543
                    S+ +  Y +   ++ +   +     G+    +  +   +            
Sbjct: 305 ----QHQEVSKQDMSYFDDEKKEKYIPYVIEPSLGADRMVLAFLCSAYDEEELEGGDMRT 360

Query: 544 -GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
             +    L+P++  V  ++    E A+++   L  H  + E D R   I  + R      
Sbjct: 361 VMHFHPALAPVKIGVLPLSKKLNEGAEKVFAELSKH-YNCEFDDRGN-IGKRYRRQDEIG 418

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            P  +        + ++ +R   S   +++ + D      +
Sbjct: 419 TPFCVTYDFDSEEDGAVTVRDRDSMEQERIKIEDLKAYFEE 459


>gi|312601357|gb|ADQ90612.1| Prolyl-tRNA synthetase [Mycoplasma hyopneumoniae 168]
          Length = 290

 Score = 86.0 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 37/167 (22%), Positives = 65/167 (38%), Gaps = 14/167 (8%)

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           GA      E ++++   R  Q  T   +  N    F  FY N  ++   P    +  +G 
Sbjct: 18  GAVNTYTVEAMMQNF--RALQSATAHFLGQNFAKNFEIFYKNKENKSQIPF---QTSWGL 72

Query: 531 IERFIGIMI----ENFKGNLPLWLSPIQAIVT----TITSSAVEYAQEIANLLKSHHLSI 582
             R IG ++    ++     P  ++PIQ  +             +++ IA +LK+  +S 
Sbjct: 73  STRLIGAIVMVHSDDNGLIFPPKIAPIQVDILEFFSKKNQEVKIFSKRIAKILKNAKISY 132

Query: 583 ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           + D  ++ I YKI    +   PI I  G  E     I + R  +   
Sbjct: 133 KIDDTDQQIGYKINNSEVHGAPIRIEIGPNEVKNNQICLVRRDNHQK 179


>gi|47202575|emb|CAF87891.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 366

 Score = 86.0 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 41/212 (19%), Positives = 76/212 (35%), Gaps = 13/212 (6%)

Query: 344 HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFN 402
               +   ++S+R+LP++L ++ +V R E        +R R F   + H  F TKE+   
Sbjct: 1   MYPAYAKWVQSHRDLPIKLNQWCNVVRWEFKHP-QPFLRTREFLWQEGHTAFATKEEAAE 59

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
           E L+I +L   +Y++     ++    T  EK  G D      E  +      I+      
Sbjct: 60  EVLQILDLYARVYEELMAIPVVKGRKTEKEKFAGGDYTTTV-EAFISASGRAIQVPGA-- 116

Query: 463 INTGVLLGEGAFYGPK-FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
                   EG ++G    E       G      +  +  N    F   + +   +     
Sbjct: 117 --PPSGAPEGLWWGAAVIEAPALCPQG----ATSHHLGQNFSKMFEIVFEDPK-KPGEKQ 169

Query: 522 MIHRAVFGSIERFIGIMIENFKGNLPLWLSPI 553
           +  +  +G   R IG++      N  L  +  
Sbjct: 170 LAFQNSWGITTRTIGVLTMVHGDNKGLVAAAQ 201


>gi|304373198|ref|YP_003856407.1| Glycyl tRNA synthetase [Mycoplasma hyorhinis HUB-1]
 gi|304309389|gb|ADM21869.1| Glycyl tRNA synthetase [Mycoplasma hyorhinis HUB-1]
          Length = 458

 Score = 86.0 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 63/339 (18%), Positives = 111/339 (32%), Gaps = 26/339 (7%)

Query: 310 HWDSYRANMFAVKCADDTIKDLR-TFALKPMNCPGHVAVFNHGLKSYR-ELPVRLAEFGS 367
            W+  +      +     ++D +    L+P    G    F +  +S R +LP  + + G 
Sbjct: 139 RWEEIKQFNLMFETQQGVVEDKKSKIFLRPETAQGIFINFKNIQRSMRLKLPFGIGQIGK 198

Query: 368 VYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKL 427
            +RNE +   + + R R F Q +  +FC  EQ         N I      F   KI   L
Sbjct: 199 SFRNEITPG-NFIFRTREFEQMELEIFCHPEQANQIFDDYLNKIQDFL--FNELKINKDL 255

Query: 428 STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI---NTGVLLGEGAFYGPKFEYILK 484
                 +    A +  A + +   L          +   +   L    A  G K +Y   
Sbjct: 256 VRVRHHKQEELAHYSLATSDI-EFLFLFGWGELIGLANRSDFDLKAHSAASGEKIDY--- 311

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
                        +D     +F  + +         ++     F   E+      +    
Sbjct: 312 -------------LDPFTNQKFFPYIIEPSMGVDRLLLAVLTNFYKEEKLEENEEKRSLL 358

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
            LP  LSP +  +  +       A EI NLL  + +S   D  N +I  + R        
Sbjct: 359 ALPYSLSPFKVAILPLVKKLSPKALEIYNLLLKNSISATFDE-NNSIGKRYRIQDAIGTY 417

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             I    +   + +I IR   S    ++++   +  L K
Sbjct: 418 FSITVDYQSLEDNTITIRERDSMKQSRIAIDQLLNFLEK 456


>gi|325188965|emb|CCA23493.1| prolyltRNA synthetase putative [Albugo laibachii Nc14]
          Length = 620

 Score = 86.0 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 41/213 (19%), Positives = 73/213 (34%), Gaps = 24/213 (11%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           E+    ++ L R      I + G G         ++ Q L   +  +++  +  + + P 
Sbjct: 32  EAAVPSYQLLLRAG---FIRKSGHGTFAMLPLATRVLQKLEDIIDTEMEKINGNKCDLPA 88

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++   LW+ S  W S  + +F  +   +         L P +     A+      S  E 
Sbjct: 89  IVSSDLWKLSDRWRSRTSELFTFRDRRNN-----EQILAPTHEEPMTALVAQHHNSTHES 143

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK--------EQMFNECLKIHNL 410
            +RL + G  YR+E      GL+R R F   D + F T         + +     +I   
Sbjct: 144 -LRLYQIGKKYRDEVRPRF-GLLRAREFIMKDMYSFDTNYSNAVTTYDAVIGSYKRILQQ 201

Query: 411 IIS-----IYKDFGFEKIMVKLSTRPEKRVGSD 438
           I+      +  D G               VG D
Sbjct: 202 ILRLPVVQVQADTGDIGGNFSHEFHVLASVGED 234



 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/182 (14%), Positives = 61/182 (33%), Gaps = 27/182 (14%)

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAF------YVNSHSEKCHPVMIHRAVFGSIERFI 535
             K+ + +  +   +   F L  R++         ++  S    P  +     G   R +
Sbjct: 430 HCKEGLLKASRGIEVAHAFYLGQRYSNSMNALHSRISEGSVVKEPYEMGCFGLGVS-RLL 488

Query: 536 GIMIENFKGN----LPLWLSPIQAIVTTITSSAVEY-----AQEIANLLKSHHL------ 580
             ++E          P  ++P   IV  I ++ V++     A +IA  L           
Sbjct: 489 AAIVETSHDKNGIQWPGVIAPYHIIVLAIGATCVDHPLAIGANKIAAQLSQMPFVASSTL 548

Query: 581 ----SIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
                +  D R   +   K+ E  +   P  ++ G + A+ R + ++   +     +   
Sbjct: 549 SGSVHVILDDRWQTSAGVKLVESELIGYPYRVVIGKQYATARLVEVQNRLTMEKTFIKPE 608

Query: 636 DA 637
           + 
Sbjct: 609 EL 610


>gi|120437853|ref|YP_863539.1| glycyl-tRNA synthetase [Gramella forsetii KT0803]
 gi|117580003|emb|CAL68472.1| glycyl-tRNA synthetase [Gramella forsetii KT0803]
          Length = 515

 Score = 86.0 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 59/346 (17%), Positives = 114/346 (32%), Gaps = 35/346 (10%)

Query: 308 SGHWDSYRA-NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEF 365
           S +W   R  N+        +        L+P    G    F++  K+   ++P  +A+ 
Sbjct: 186 SKNWTEVRQFNLMFGTKLGASADSATDLYLRPETAQGIFVNFSNVQKTGRMKIPFGIAQI 245

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKI 423
           G  +RNE   +   + R+R F Q +   F     E  + E  K   L        G E  
Sbjct: 246 GKAFRNEIV-ARQFIFRMREFEQMEMQFFVRPGEELEWYEKWKEIRLNWHRSLGLGEENY 304

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA--FYGPKFEY 481
            +    +      + A  +         L+ I + +   +            FY P    
Sbjct: 305 RLHDHEKLAHYANAAADIEFDFPFGFKELEGIHSRTDFDLKAHEEHSGKKLRFYDP---- 360

Query: 482 ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN 541
            LK+         +I +D    S  ++          +   +                  
Sbjct: 361 ELKENYVPYVIETSIGLDRMFLSVLSSSLKEEDLGDGNTRTV------------------ 402

Query: 542 FKGNLPLWLSPIQAIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
               LP  L+P +A +  +       E AQ+I + LK     ++ D ++  I  + R   
Sbjct: 403 --LKLPAVLAPTKAAILPLVKKDGLPELAQKIVDELK-WDFKVQYDEKDA-IGRRYRRQD 458

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
               P+ I        + ++ +R   S   ++VS+ +   ++ KE+
Sbjct: 459 AAGTPLCITVDHDSLEDNAVTVRFRDSMEQKRVSIEELDTLIRKET 504


>gi|154505898|ref|ZP_02042636.1| hypothetical protein RUMGNA_03440 [Ruminococcus gnavus ATCC 29149]
 gi|153793916|gb|EDN76336.1| hypothetical protein RUMGNA_03440 [Ruminococcus gnavus ATCC 29149]
          Length = 463

 Score = 86.0 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 46/341 (13%), Positives = 101/341 (29%), Gaps = 46/341 (13%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    F +  + S +++P  +A+ G  +RNE +
Sbjct: 152 FNLMFKTFQGVTEDAKNVVYLRPETAQGIFVNFKNVQRTSRKKIPFGIAQIGKSFRNEIT 211

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              +   R R F Q +   FC             +  ++     G +   V+      + 
Sbjct: 212 PG-NFTFRTREFEQMELEFFCEPGTDLEWFNYWKSFCLNWLSSLGLKDDEVRYRDHDAEE 270

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           +   + +  A   +   L          I       +   Y                   
Sbjct: 271 L---SFYSKATTDV-EFLFPFGWGELWGI------ADRTDYDLT---------------- 304

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI-----ENFKG----- 544
                    S+ +  Y +   ++ +   +     G+    +  +      E  +G     
Sbjct: 305 ----QHQEVSKQDLTYFDDEKKEKYIPYVIEPSLGADRMVLAFLCSAYDEEELEGGDTRT 360

Query: 545 --NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
             +    L+P++  V  ++    E A+++   L     + E D R   I  + R      
Sbjct: 361 VLHFHPALAPVKIGVLPLSKKLNEGAEKVFAELSKT-YNCEFDDRGN-IGKRYRRQDEIG 418

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            P  +        + ++ +R   +   ++V + D      K
Sbjct: 419 TPFCVTYDFDSEEDGAVTVRDRDTMEQERVKIEDLKAYFEK 459


>gi|32140555|dbj|BAC78194.1| prolyl-tRNA synthetase [Raphanus sativus]
          Length = 220

 Score = 86.0 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 46/131 (35%), Gaps = 11/131 (8%)

Query: 524 HRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTTI------TSSAVEYAQEIAN 573
            +  +    R IG+MI     +  L L P    +Q +V  +      T    +      +
Sbjct: 1   WQNSWAYSTRTIGVMIMTHGDDKGLILPPKVASVQVVVIPVPYKDANTQGIFDACTATVS 60

Query: 574 LLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
            L    +  E D R+  +  +K     +K +P+ I  G ++     +   R  +   + +
Sbjct: 61  ALSEAGIRAEEDLRDNYSPGWKYSNWEMKGVPLRIEIGPRDLENDQVRTVRRDNGAKEDI 120

Query: 633 SLLDAIPILTK 643
                +  + +
Sbjct: 121 PRGSLVEHVKE 131


>gi|332376799|gb|AEE63539.1| unknown [Dendroctonus ponderosae]
          Length = 329

 Score = 86.0 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 46/238 (19%), Positives = 92/238 (38%), Gaps = 22/238 (9%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGK-VCDLSDPVREGSI-EIITPEDPRSL---AVIRH 75
           +T  D A+ +   + +++V   +NGK +  +  P+ +  + E++    P       V   
Sbjct: 70  STPFDCAKHLGEMVRERSVVGLMNGKTLWHMHKPLPDSCVLELLHHHVPNPQVVNKVFWR 129

Query: 76  SCAHIMAEAVQSIWP-----EVQVAIGPIIEDG-FYYDFDK---EQPFSSDELAQIEKKM 126
           +C+ ++   V   +       +     P ++ G F YD          +  EL  +  + 
Sbjct: 130 TCSFLLGAVVSQAFKDNVQVHLHSFPSPNVKSGSFIYDVQLGLSNWEPTVAELKVLSLEF 189

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPA--KENVTLYRQGEWFDLCR 184
            +   ++ P     ++   A E+FE     +K + +  I A     VTL++ G   D+ R
Sbjct: 190 IKFCQKEQPIECLDVNRNTALEIFE--NNPHKSQQIPDIAAHNSNKVTLFKVGSHIDISR 247

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           GP + +T Q+ +      V  A       +  + R  G A      +  + Y L E  
Sbjct: 248 GPMLPNTNQMGRV----TVTNAIKLDTDIKEPIYRFQGVALPRSIRINHFAYSLIEDR 301


>gi|197303356|ref|ZP_03168396.1| hypothetical protein RUMLAC_02079 [Ruminococcus lactaris ATCC
           29176]
 gi|197297640|gb|EDY32200.1| hypothetical protein RUMLAC_02079 [Ruminococcus lactaris ATCC
           29176]
          Length = 478

 Score = 85.6 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 48/344 (13%), Positives = 104/344 (30%), Gaps = 49/344 (14%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPS 374
            N+        T     T  L+P    G    F +  + S ++LP  + + G  +RNE +
Sbjct: 164 FNLMFKTFQGVTEDAKNTVYLRPETAQGIFVNFKNVQRTSRKKLPFGIGQIGKSFRNEIT 223

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              +   R R F Q +   FC  +          N  ++     G ++  V+     ++ 
Sbjct: 224 PG-NFTFRTREFEQMELEFFCKPDTDLEWFDYWKNFCLNWLSSLGLKEDEVRYRDHDKEE 282

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           +   + +  A   +   L          I       +   Y                   
Sbjct: 283 L---SFYSKATTDV-EFLFPFGWGELWGI------ADRTDYDLT---------------- 316

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKG------ 544
                    S  +  Y +  +++ +   +     G+    +  +     E   G      
Sbjct: 317 ----QHQNVSGQDLTYFDDETKEKYIPYVIEPSLGADRMVLAFLCSAYDEENIGTEEKPD 372

Query: 545 -----NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
                +    L+P++  V  ++    E A+++   L  +  + E D R   I  + R   
Sbjct: 373 MRTVLHFHPALAPVKIGVLPLSKKLNEGAEKVYTELCKY-YNCEFDDRGN-IGKRYRRQD 430

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
               P  +        + ++ +R   +   ++V + D      K
Sbjct: 431 EIGTPFCVTYDFDSEEDGAVTVRDRDTMEQERVKIEDLKAYFEK 474


>gi|322807844|emb|CBZ05419.1| glycyl-tRNA synthetase [Clostridium botulinum H04402 065]
          Length = 463

 Score = 85.6 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 57/349 (16%), Positives = 118/349 (33%), Gaps = 55/349 (15%)

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEP 373
           + N+        T        L+P    G    F +  + S +++P  +A+ G  +RNE 
Sbjct: 151 KFNLMFKTFQGVTEDAKSEIYLRPETAQGIFVNFKNVQRTSRKKVPFGIAQIGKSFRNEI 210

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP 431
           +   +   R R F Q +   FC    +  +    K +     I      E I  +  ++ 
Sbjct: 211 TPG-NFTFRTREFEQMELEFFCKPGTDLEWFNYWKDYCWNFLINLGINKENIRFRDHSQE 269

Query: 432 EKRVGSD--------------ALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           E    S+               LW  A+     +   +++S +D +N  +       Y P
Sbjct: 270 ELSHYSNATSDIEFLFPFGWGELWGVADRTDFDLKKHMEHSGED-LNY-LDPATKERYVP 327

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
              Y ++ ++G D       VD                +  + + +H             
Sbjct: 328 ---YCIEPSLGADRVVLAFLVDAYDEEEL------EGGDVRNVLHLH------------- 365

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
                       L+P +A V  ++    + +QE+ ++L+    +I+ D    +I  + R 
Sbjct: 366 ----------PALAPFKAAVLPLSKKLSDKSQEVYSMLRKK-FNIDYDEAG-SIGKRYRR 413

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
                 P  I        + ++ IR   +    +VS+ + +    ++ L
Sbjct: 414 EDEIGTPYCITVDFDTLEDNTVTIRDRDTMNQIRVSINE-LEKFIEDKL 461


>gi|148377533|ref|YP_001256409.1| glycyl-tRNA synthetase [Mycoplasma agalactiae PG2]
 gi|148291579|emb|CAL58965.1| Glycyl tRNA synthetase (Glycine tRNA ligase) [Mycoplasma agalactiae
           PG2]
          Length = 458

 Score = 85.6 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 56/342 (16%), Positives = 116/342 (33%), Gaps = 45/342 (13%)

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR-ELPVRLAEFGSVYRNEP 373
           + N+           +     L+P    G    F + L+S R +LP+ + + G  +RNE 
Sbjct: 146 KFNLMFETKQGIIEGEKSLIYLRPETAQGIFVNFKNVLRSTRAKLPIGIGQVGKSFRNEV 205

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
           +   + + R R F Q +  VF   +       K  N   +     G +   +++    + 
Sbjct: 206 TPG-NFIFRTREFEQMELEVFHDPKDSELIFNKYLNKCKTFANLVGIKDENIRIRAHEQD 264

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
            +   + +  A + ++                G LLG       + ++ LK         
Sbjct: 265 EL---SHYSSATSDIE---------YLFPFGWGELLGVAN----RTDFDLKA-------- 300

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK---------- 543
             +Q        F+       + K  P +I     G     + ++I+++           
Sbjct: 301 -HMQATGESLEYFDPVT----NSKLIPYVIE-PSMGLDRLMLALLIDSYDEELVSENDTR 354

Query: 544 --GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
               +P  ++P +  +  +     E A+EI   L   ++ I  D    +I  + R     
Sbjct: 355 IVLKVPNGVAPYKFAILPLVKKLNEKAEEIYKQLLKLNIPITYDDAG-SIGKRYRRQDSI 413

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             P  I       ++  I IR   S + +++S+ +      K
Sbjct: 414 GTPYCITIDYDSLNDECITIRNRDSMSQERISISNLYEFAQK 455


>gi|295109870|emb|CBL23823.1| glycyl-tRNA synthetase, dimeric type [Ruminococcus obeum A2-162]
          Length = 464

 Score = 85.6 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 43/343 (12%), Positives = 99/343 (28%), Gaps = 48/343 (13%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPS 374
            N+        T     T  L+P    G    F +  + S +++P  + + G  +RNE +
Sbjct: 151 FNLMFKTFQGVTEDAKNTVYLRPETAQGIFVNFKNVQRTSRKKIPFGIGQIGKSFRNEIT 210

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              +   R R F Q +   FC  +             +      G ++  V+     ++ 
Sbjct: 211 PG-NFTFRTREFEQMELEFFCEPDTDLEWFAYWKKFCLDWLSSLGLKEDEVRYRDHDKEE 269

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           +   + +  A   +   L          I       +   Y                   
Sbjct: 270 L---SFYSKATTDV-EFLFPFGWGELWGI------ADRTDYDLT---------------- 303

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP------- 547
                    S  +  Y +   ++ +   +     G+    +  +   +   +        
Sbjct: 304 ----QHQNVSGQDLTYFDDEKKQKYIPYVIEPSLGADRMVLAFLCSAYDEEVLDAEKNDV 359

Query: 548 -------LWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
                    L+P++  V  ++    E A++I   L     + E D R   I  + R    
Sbjct: 360 RTVLHFHPVLAPVKIGVLPLSKKLNEGAEKIYQQLSKK-YNCEYDDRGN-IGKRYRRQDE 417

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              P  I    +  ++ ++ +R   +    ++ + +       
Sbjct: 418 IGTPFCITYDFESENDGAVTVRDRDTMEQVRIKIDELDAYFAD 460


>gi|331086020|ref|ZP_08335103.1| glycyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA]
 gi|330406943|gb|EGG86448.1| glycyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA]
          Length = 462

 Score = 85.6 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 42/341 (12%), Positives = 101/341 (29%), Gaps = 46/341 (13%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPS 374
            N+        T     T  L+P    G    F +  + S +++P  +A+ G  +RNE +
Sbjct: 151 FNLMFKTFQGVTEDAKNTVYLRPETAQGIFVNFKNVQRTSRKKIPFGIAQVGKSFRNEIT 210

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              +   R R F Q +   FC                +      G ++  +++     + 
Sbjct: 211 PG-NFTFRTREFEQMELEFFCEPGTDLEWFAYWKKFCLDWLSSLGLKEEEIRVRDHSPEE 269

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           +     +  A + +                 G+            +    D         
Sbjct: 270 L---CFYSKATSDV-----EFLFPFGWGELWGIA-----------DRTDYDLS------- 303

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK----------- 543
                    S+ +  Y +   ++ +   +     G+    +  +   +            
Sbjct: 304 ----QHQEVSKQDLTYFDDEKKEKYIPYVIEPSLGADRMVLAFLCSAYDEEELEGGDTRT 359

Query: 544 -GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
             +    L+P++  V  ++    E A+++   L     + E D R   I  + R      
Sbjct: 360 VMHFHPALAPVKIGVLPLSKKLNEGAEKVFAELSKT-YNCEFDDRGN-IGKRYRRQDEIG 417

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            P  +    +   + ++ +R   +   +++ + D      K
Sbjct: 418 TPFCVTYDFESEEDGAVTVRDRDTMEQERIKIEDLKAYFEK 458


>gi|145640807|ref|ZP_01796389.1| prolyl-tRNA synthetase [Haemophilus influenzae R3021]
 gi|145274321|gb|EDK14185.1| prolyl-tRNA synthetase [Haemophilus influenzae 22.4-21]
          Length = 125

 Score = 85.6 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 22/127 (17%), Positives = 48/127 (37%), Gaps = 9/127 (7%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q   +       +++   H+ + R   +  +A   SG+  W   G ++ + +   +R 
Sbjct: 3   TSQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMA---SGLYNWLPTGIRVLKKVEKVVRE 59

Query: 286 KIKDD-YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
           ++      E+  P V    LW++SG W+ Y   +   +   +     R F L P +    
Sbjct: 60  EMNKGGAIEVLMPVVQPAELWEESGRWEQYGPELLRFEDRGN-----RNFVLGPTHEEVI 114

Query: 345 VAVFNHG 351
               +  
Sbjct: 115 TDFSSSR 121


>gi|316977452|gb|EFV60548.1| putative TGS domain protein [Trichinella spiralis]
          Length = 1286

 Score = 85.6 bits (210), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 95/236 (40%), Gaps = 26/236 (11%)

Query: 21   ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV--REGSIEIITPEDPRSL---AVIRH 75
            +T    A  +SR LA ++    +N K  D+  P+   + +++ +   D            
Sbjct: 1040 STPHHCAMHVSRMLADRSPLALVNNKPWDMHRPLPSTDCNLQFLFFTDLNPHLVNKAFWR 1099

Query: 76   SCAHIMAEAVQ-SIWPEVQVAIGP-----IIEDGFYYD----FDKEQPFSSDELAQIEK- 124
            +C+ ++    + S+   + V +       +    F YD     +        +L  + + 
Sbjct: 1100 TCSFVLGYIFETSLKKSIGVTLHSWPFVNVSSGSFIYDIALQMNNNLTIKKADLDVLGRV 1159

Query: 125  KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK----ENVTLYRQGEWF 180
             + ++  ++ PF +  +  +   E+F+     +K+E ++++  K       ++YR G+  
Sbjct: 1160 VVDDLRKKNFPFERLEVGVDVLEEMFK--NNNFKLEQIKNMANKGDECGTFSVYRMGDHV 1217

Query: 181  DLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
            D+ +GP + ST Q+  +     V   +     +   L R+ G A    Q +  + +
Sbjct: 1218 DISKGPMISSTAQLGLY----SVTAMHPIQTEDNLSLYRVQGCALPFNQRVNSWTW 1269


>gi|153810740|ref|ZP_01963408.1| hypothetical protein RUMOBE_01124 [Ruminococcus obeum ATCC 29174]
 gi|149833136|gb|EDM88218.1| hypothetical protein RUMOBE_01124 [Ruminococcus obeum ATCC 29174]
          Length = 464

 Score = 85.6 bits (210), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 44/337 (13%), Positives = 98/337 (29%), Gaps = 48/337 (14%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPS 374
            N+        T     T  L+P    G    F +  + S +++P  + + G  +RNE +
Sbjct: 151 FNLMFKTFQGVTEDAKNTVYLRPETAQGIFVNFKNVQRTSRKKIPFGIGQIGKSFRNEIT 210

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              +   R R F Q +   FC  +             +      G +   V+     ++ 
Sbjct: 211 PG-NFTFRTREFEQMELEFFCEPDTDLEWFAYWKKFCLDWLSSLGLKDDEVRYRDHDKEE 269

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           +   + +  A   +   L          I       +   Y                   
Sbjct: 270 L---SFYSKATTDV-EFLFPFGWGELWGI------ADRTDYDLT---------------- 303

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP------- 547
                    S  +  Y +   ++ +   +     G+    +  +   +   +        
Sbjct: 304 ----QHQNVSGQDLTYFDDEKKQKYIPYVIEPSLGADRMVLAFLCSAYDEEVLDAEKNDV 359

Query: 548 -------LWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
                    L+P++  V  ++    E A++I   L     + E D R   I  + R    
Sbjct: 360 RTVLHFHPVLAPVKIGVLPLSKKLNEGAEKIFQKLSKK-YNCEFDDRGN-IGKRYRRQDE 417

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
              P  I    +  ++ ++ +R   +    +V + + 
Sbjct: 418 IGTPFCITYDFESENDGAVTVRDRDTMEQVRVKIEEL 454


>gi|14970558|emb|CAC44360.1| ProS protein [Erwinia chrysanthemi]
          Length = 224

 Score = 85.6 bits (210), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 53/168 (31%), Gaps = 11/168 (6%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           I R  + G I Q+         A             M    +   + R I   IE    +
Sbjct: 57  IKRGIEVGHIFQLGKKYSEALKATVQGEDGRNQTLTMGCYGI--GVTRVIAAAIEQNHDD 114

Query: 546 ----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
                P  ++P Q  +  +         E A+ I   L+++ + +  D R E       +
Sbjct: 115 RGIIWPDAIAPFQVAILPMNMHKSFRVQEVAEGIYQQLRANGVDVLLDDRKERPGVMFAD 174

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
             +  IP  I+ GD+      I  +       + +   D +  L  + 
Sbjct: 175 MELIGIPHTIVIGDRNLDNDEIEYKHRRKGEKEMIKAGDIVEFLLSQC 222


>gi|212640589|ref|YP_002317109.1| glycyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
 gi|212562069|gb|ACJ35124.1| Glycyl-tRNA synthetase (class II) [Anoxybacillus flavithermus WK1]
          Length = 460

 Score = 85.2 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 53/332 (15%), Positives = 103/332 (31%), Gaps = 28/332 (8%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    F +  ++  ++LP  +A+ G  +RNE +
Sbjct: 149 FNLMFKTFQGVTESSANEIYLRPETAQGIFVNFKNVQRTMRKKLPFGIAQIGKSFRNEIT 208

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
              +   R R F Q +   FC    E  + +  + +     +      E I ++  +  E
Sbjct: 209 PG-NFTFRTREFEQMELEFFCKPGEELQWFDYWRQYCEQWLLSLGMKRENIRLRDHSEDE 267

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
               S+A  D                    I      G G  +G             ++ 
Sbjct: 268 LSHYSNATTD--------------------IEYKFPFGWGELWGIASRTDYDLRRHMEYS 307

Query: 493 CGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLS 551
                  D     RF  + +         V +   +    E  +         +L   L+
Sbjct: 308 GEDFHYLDQETNERFIPYCIEPSLGADR-VTLAFMIDAYEEEQLADGTTRTVMHLHPALA 366

Query: 552 PIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
           P +A V  ++    E A+ I   L S H  ++ D    +I  + R       P  I    
Sbjct: 367 PYKAAVLPLSKKLSEGARAIFEQL-SQHFMVDYDESG-SIGKRYRRQDEIGTPFCITYDF 424

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
               ++ + +R   +    ++ + +    L +
Sbjct: 425 DSEQDQMVTVRDRDTMEQTRIPIAELKSFLEE 456


>gi|149195568|ref|ZP_01872625.1| glycyl-tRNA synthetase [Lentisphaera araneosa HTCC2155]
 gi|149141030|gb|EDM29426.1| glycyl-tRNA synthetase [Lentisphaera araneosa HTCC2155]
          Length = 485

 Score = 85.2 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 51/345 (14%), Positives = 102/345 (29%), Gaps = 53/345 (15%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE-LPVRLAEFGSVYRNEPS 374
            N+           +     L+   C      F     S R+ LP  +A+ G  +RNE +
Sbjct: 169 FNLMMQTYVGPVFSEENKAYLRAETCQPIFVNFQTICNSTRQKLPFGIAQTGKAFRNEIN 228

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              +   R R F Q +   FC  +   +      +  ++ Y D     +  K  +     
Sbjct: 229 PR-NFTFRSREFNQMEMEFFCHSDDSMDWYNFWRDQRLAFYSDV----LKFKPESMRTHD 283

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
               A +  A          +    +     G L G                 G      
Sbjct: 284 HDKLAHYAKA---------AMDIEFEFPFGWGELEG-------------IHHRGTWDLSQ 321

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK----------- 543
             +        F+       +EK  P ++  +V G     + ++ E +            
Sbjct: 322 HAEFSGQKQEYFD----QGRNEKYIPTVVETSV-GLDRLMLALLCEAYDEDEAETAKDGK 376

Query: 544 -------GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                     P  ++P+Q  +  ++    E A+E+   LK      E D   ++I  + R
Sbjct: 377 EVEGRVVMRFPAIIAPVQVAILPLSKKLGEGARELHAKLKPF-FRSEYDE-AQSIGKRYR 434

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
                  P  +        +  + +R   + + ++V++      L
Sbjct: 435 RQDEIGTPFCLTFDFDSLEDNCVTVRERDTMSQERVAIDQLANYL 479


>gi|261367209|ref|ZP_05980092.1| glycine--tRNA ligase [Subdoligranulum variabile DSM 15176]
 gi|282570808|gb|EFB76343.1| glycine--tRNA ligase [Subdoligranulum variabile DSM 15176]
          Length = 473

 Score = 85.2 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 52/351 (14%), Positives = 115/351 (32%), Gaps = 53/351 (15%)

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEP 373
           + N+        T     T  L+P    G    F +  ++  R+LP  + + G  +RNE 
Sbjct: 150 KFNLMFKTAIGVTEDSSSTCYLRPETAQGIFVNFANIQRTTRRKLPFGVCQVGKAFRNEI 209

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
           +   +   R R F Q +   FC             +   +     G ++  ++L      
Sbjct: 210 TPG-NFTFRTREFEQMECEFFCKPNTDLEWFAYWKDFCKNWLLSLGIKEENLRLRDHEAA 268

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRI----NTGVLLGEGA------FYGPK----- 478
            +   A +  A   ++             I    N  +   + A      ++ P+     
Sbjct: 269 EL---AFYSRATTDIEYAFPFTDWGELWGIADRTNYDLSRHQEASGKSLEYFDPETNEHY 325

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
             Y+++ ++G    C  + + F   +      V++  ++    ++H   F          
Sbjct: 326 IPYVIEPSLG----CDRVALAFLCEAYDEEHLVDAKGKEDVRTVLHLHPF---------- 371

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
                      L+P +  V  ++    + A EI N L +    ++ D    +I  + R  
Sbjct: 372 -----------LAPFKCAVLPLSKKLGDKAMEIRNEL-AKDFMVDYDDAG-SIGKRYRRQ 418

Query: 599 SIKKIPIII-----ICGDKEAS-ERSIGIRRFGSTTTQKVSLLDAIPILTK 643
                P+ I       GD +   +  + +R   +    ++ + +    + K
Sbjct: 419 DEIGTPLCITVDFQTVGDDKVEADNCVTVRDRDTMEQVRLPISELKDYIAK 469


>gi|168335368|ref|ZP_02693462.1| phosphoribulokinase/uridine kinase [Epulopiscium sp. 'N.t.
           morphotype B']
          Length = 528

 Score = 85.2 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 43/229 (18%), Positives = 84/229 (36%), Gaps = 5/229 (2%)

Query: 22  TGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIM 81
           T  D+A+       +   A      + +L + + E ++  I   D   + +   +C  +M
Sbjct: 3   TYFDLAKEKYAG--QNVCAFKGTKGLIELGNKIDELNVTPIYLTDKDGMRIFERTCTFLM 60

Query: 82  AEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYL 141
             A + ++ E  + I   +  G++ +F       S  +  I++KM E+I  D P  K+ +
Sbjct: 61  IVATKLLFNEQVI-INHHMSGGYFGEFVNLDFNVSKNIGAIKEKMLELIEADLPIEKEVV 119

Query: 142 SHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLM 201
              KA + FE+     K E++        +  Y+  +  D   G  + STG +K F    
Sbjct: 120 LVGKAIDFFENTGMIDKSELI-KYRRTSTINTYKLEDVQDYFYGYMLPSTGCIKLFDLYA 178

Query: 202 KVAGA-YWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKL 249
              G      D   P +           +   +   ++         KL
Sbjct: 179 YGHGFMLLFPDKKNPEILAEKKYEPQLFEVFKESKQWVRILGVDTVAKL 227


>gi|310829040|ref|YP_003961397.1| glycyl-tRNA synthetase [Eubacterium limosum KIST612]
 gi|308740774|gb|ADO38434.1| glycyl-tRNA synthetase [Eubacterium limosum KIST612]
          Length = 461

 Score = 85.2 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 51/343 (14%), Positives = 103/343 (30%), Gaps = 50/343 (14%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    F +  ++  +++P  + + G  +RNE +
Sbjct: 150 FNLMFKTFQGVTEDSSSEIYLRPETAQGIFVNFKNVQRTTRKKIPFGIGQIGKSFRNEIT 209

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
              + + R R F Q +   FC    +  +    K              E +  +   + E
Sbjct: 210 PG-NFIFRTREFEQMELEFFCEPGTDLEWFTYWKDFCRNWLFSLGMKEENVRFRDHEKEE 268

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
               S+A  D                       G+                ++  G+D Q
Sbjct: 269 LSHYSNATTDV----------EFLFPFGWGELWGIADRTDFDLT-----QHQNVSGKDMQ 313

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI------------E 540
                           +     +EK  P +I     G+   F+  +             E
Sbjct: 314 ----------------YQDPVTNEKYLPYVIE-PSLGADRMFLAFLCNAMEKETLENGEE 356

Query: 541 NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
                +   LS  +A V  ++    E A E+   L + H  ++ D    +I  + R    
Sbjct: 357 RNVMKIHPALSAYKAAVLPLSKKLSEKATEVYAQL-AKHFMVDYDEAG-SIGKRYRRQDE 414

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              PI I        + ++ +R   +    ++ + + +  + K
Sbjct: 415 IGTPICITVDFDTQEDNAVTLRDRDTMEQVRLPIDEVVGYIEK 457


>gi|223985700|ref|ZP_03635747.1| hypothetical protein HOLDEFILI_03053 [Holdemania filiformis DSM
           12042]
 gi|223962311|gb|EEF66776.1| hypothetical protein HOLDEFILI_03053 [Holdemania filiformis DSM
           12042]
          Length = 458

 Score = 85.2 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 49/381 (12%), Positives = 111/381 (29%), Gaps = 59/381 (15%)

Query: 270 RKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
            +GW   + ++ +++         I  P                ++     ++ A  TI 
Sbjct: 114 PEGWS-NEKMMDFIKE------NHIACPNCGSHDFTDIRQFNLMFKTFQGILEDAKSTI- 165

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQ 388
                 L+P    G    F +  +S  R+LP  + + G  +RNE +   + + R R F Q
Sbjct: 166 -----YLRPETAQGMFVNFKNVQRSMRRKLPFGIGQIGKSFRNEITPG-NFIFRTREFEQ 219

Query: 389 DDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIM 448
            +   FC   +         N  ++   + G     ++      + +             
Sbjct: 220 MEMEFFCKPGEDLQWYEYWKNFCMNWLTNLGLNAESLRFREHTPEEL------------- 266

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
                   +     I      G G  +G      + D    D +              + 
Sbjct: 267 -----AFYSKGTSDIEYLFPFGWGELWG------IADRTDYDLKTHQEHSGE------SL 309

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP------------LWLSPIQAI 556
            Y++  + + +         G     +  + + +   +               L+P++A 
Sbjct: 310 EYLDPQTNEKYLPYCVEPAVGVERLMLAFLCDAYDEEVLNEKDTRVVLHLHPALAPVKAC 369

Query: 557 VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASE 616
           +  ++      A+EI   L       E D    +I  + R       P  +        +
Sbjct: 370 ILPLSKQLSASAKEIYAQLADS-FVCEYDEAG-SIGKRYRRQDAIGTPFCVTIDFDTEKD 427

Query: 617 RSIGIRRFGSTTTQKVSLLDA 637
             + +R   S    ++ + + 
Sbjct: 428 GCVTVRERDSMEQVRLPISEL 448


>gi|238606802|ref|XP_002396812.1| hypothetical protein MPER_02873 [Moniliophthora perniciosa FA553]
 gi|215470062|gb|EEB97742.1| hypothetical protein MPER_02873 [Moniliophthora perniciosa FA553]
          Length = 222

 Score = 85.2 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 54/146 (36%), Gaps = 17/146 (11%)

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQA----------IVTTITSS 563
                  + + +  +G   R IG+M+     N  L L P  A          I    T  
Sbjct: 17  DPTGQGKLYVWQNSWGLSTRTIGVMVMVHGDNQGLVLPPRVASVQVVVVPCGITVKTTDE 76

Query: 564 A----VEYAQEIANLLKSHHLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASER- 617
                 +   E+A  LK   +  + D R+  T  YK  +   K +P+ +  G K+   R 
Sbjct: 77  QRAQINQACDELAATLKKAGIKAKADLRDGYTPGYKFNDWEQKGVPLRLEIGPKDLEGRQ 136

Query: 618 SIGIRRFGSTTTQKVSLLDAIPILTK 643
           ++ +R   +   + VSL +    + +
Sbjct: 137 TLSVR-RDTGEKKPVSLDNIASSIRE 161


>gi|229007232|ref|ZP_04164833.1| Glycyl-tRNA synthetase [Bacillus mycoides Rock1-4]
 gi|228753986|gb|EEM03423.1| Glycyl-tRNA synthetase [Bacillus mycoides Rock1-4]
          Length = 455

 Score = 85.2 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 53/342 (15%), Positives = 106/342 (30%), Gaps = 49/342 (14%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    F +  +S  ++LP  + + G  +RNE +
Sbjct: 145 FNLMFKTFQGVTESSTNEIFLRPETAQGIFVNFKNVQRSMRKKLPFGIGQIGKSFRNEIT 204

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              +   R R F Q +   FC   +         N   +     G  +  ++L       
Sbjct: 205 PG-NFTFRTREFEQMELEFFCKPGEDLEWFTFWRNTCKNWLLSLGMHEESMRLRDH---- 259

Query: 435 VGSDAL--WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
            G D L  + +A   +       K         GV          + ++ LK        
Sbjct: 260 -GEDELSHYSNATTDI-----EFKFPFGWGELWGVAS--------RTDFDLK------RH 299

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP----- 547
                 DFN       +     +E+  P  I     G+    +  + + ++         
Sbjct: 300 MEHSNEDFN-------YIDPQTNERYVPYCIE-PSLGADRVTLAFLCDAYEEEQLENDSR 351

Query: 548 ------LWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
                   L+P +A +  ++    E A E+   L +    ++ D    +I  + R     
Sbjct: 352 TVLRFHPALAPYKAAILPLSKKLSEGAGEVFAEL-AKDFVVDFDETG-SIGKRYRRQDEI 409

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             P  I        ++++ +R   +    ++ + +    L K
Sbjct: 410 GTPFCITYDFDSVEDKAVTVRDRDTMEQVRMPISELKGFLEK 451


>gi|317499137|ref|ZP_07957414.1| glycyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
 gi|316893550|gb|EFV15755.1| glycyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 462

 Score = 85.2 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 45/376 (11%), Positives = 125/376 (33%), Gaps = 30/376 (7%)

Query: 271 KGWKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTI 328
            G +I  ++ ++ + +++   +  ++  P    ++  +       ++      + A +T+
Sbjct: 110 HGMEIEGSVDAWSKEEMESFINEHDVVCPTCGKKNFTEIRQFNLMFKTFQGVTEDAKNTV 169

Query: 329 KDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
                  L+P    G    F +  + S +++P  + + G  +RNE +   +   R R F 
Sbjct: 170 ------YLRPETAQGIFVNFKNVQRTSRKKIPFGIGQIGKSFRNEITPG-NFTFRTREFE 222

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENI 447
           Q +   FC  ++         N  I+  +  G ++  +++    ++ +   + +  A + 
Sbjct: 223 QMELEFFCEPDKDLEWFEYWKNYCINWLQTLGIKEDEMRVRDHEKEEL---SHYSKATSD 279

Query: 448 MKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFN 507
           +                 G+   +   Y        ++  G D        D     R+ 
Sbjct: 280 I-----EFMFPFGWGELWGI--ADRTDYDLT---QHQNTSGEDLT----YFDDVNKERYI 325

Query: 508 AFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEY 567
            + +          +         E   G        +    L+P++  +  ++    + 
Sbjct: 326 PYVIEPSLGADRVTLAFLCSAYDEEELEGGDT-RTVLHFHPALAPVKIGILPLSKKLSDG 384

Query: 568 AQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGST 627
           A ++   L +   + E D R   I  + R       P  +        + ++ +R   + 
Sbjct: 385 AMKVYEEL-AKEYNCEFDERGN-IGKRYRRQDEIGTPYCVTFDFDSLEDGAVTVRDRDTM 442

Query: 628 TTQKVSLLDAIPILTK 643
             ++V + +      +
Sbjct: 443 EQERVKIENLKAYFAE 458


>gi|326791444|ref|YP_004309265.1| glycyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
 gi|326542208|gb|ADZ84067.1| glycyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
          Length = 461

 Score = 85.2 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 51/391 (13%), Positives = 125/391 (31%), Gaps = 59/391 (15%)

Query: 277 QTLISYMRR----KIKDDYEEINTPQVLDQHLWQQSGHWDS-----YRANMFAVKCADDT 327
           + +  Y+      ++ D +        + +   +             + N+        T
Sbjct: 102 KIIEDYLDEQGTPEVVDGWSNEQMQNFIKEKAIKCPSCGAHDFTDIRQFNLMFKTFQGVT 161

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
                   L+P    G    F +  + S +++P  + + G  +RNE +   + + R R F
Sbjct: 162 EDSKNVVYLRPETAQGIFVNFKNVQRTSRKKVPFGIGQVGKSFRNEITPG-NFIFRTREF 220

Query: 387 TQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
            Q +   FC    E  + +  + +     +        + ++  +  E    S+A  D  
Sbjct: 221 EQMELEFFCKPGTELEWFDYWRSYCKNFLLSLGVDENNMRLRDHSAEELSHYSNATTDI- 279

Query: 445 ENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPS 504
                      K         G+          + ++ LK                    
Sbjct: 280 ---------EFKFPFGWGELWGIAS--------RTDFDLK-------------QHQEHSK 309

Query: 505 RFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP------------LWLSP 552
           +   ++  + +EK  P +I     G+    +  + E +                   L+P
Sbjct: 310 QDMTYFDPTTNEKYLPYVIE-PSLGADRVTLAFLCEAYDEETLEDGDTRTIFRFHPALAP 368

Query: 553 IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
           ++A V  ++    E A ++ ++L +   ++E D    +I  + R       P  I     
Sbjct: 369 VKAAVLPLSKKLSEDAVKVFDIL-AKEFNVEFDEAG-SIGKRYRRQDEIGTPFCITFDFD 426

Query: 613 EASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              ++ + +R   S   +++++ D +  + +
Sbjct: 427 SLEDQKVTVRDRDSMAQERIAIEDLVEYIRE 457


>gi|228999674|ref|ZP_04159250.1| Glycyl-tRNA synthetase [Bacillus mycoides Rock3-17]
 gi|228760036|gb|EEM09006.1| Glycyl-tRNA synthetase [Bacillus mycoides Rock3-17]
          Length = 458

 Score = 85.2 bits (209), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 53/342 (15%), Positives = 106/342 (30%), Gaps = 49/342 (14%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    F +  +S  ++LP  + + G  +RNE +
Sbjct: 148 FNLMFKTFQGVTESSTNEIFLRPETAQGIFVNFKNVQRSMRKKLPFGIGQIGKSFRNEIT 207

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              +   R R F Q +   FC   +         N   +     G  +  ++L       
Sbjct: 208 PG-NFTFRTREFEQMELEFFCKPGEDLEWFTFWRNTCKNWLLSLGMHEESMRLRDH---- 262

Query: 435 VGSDAL--WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
            G D L  + +A   +       K         GV          + ++ LK        
Sbjct: 263 -GEDELSHYSNATTDI-----EFKFPFGWGELWGVAS--------RTDFDLK------RH 302

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP----- 547
                 DFN       +     +E+  P  I     G+    +  + + ++         
Sbjct: 303 MEHSNEDFN-------YIDPQTNERYVPYCIE-PSLGADRVTLAFLCDAYEEEQLENDSR 354

Query: 548 ------LWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
                   L+P +A +  ++    E A E+   L +    ++ D    +I  + R     
Sbjct: 355 TVLRFHPALAPYKAAILPLSKKLSEGAGEVFAEL-AKDFVVDFDETG-SIGKRYRRQDEI 412

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             P  I        ++++ +R   +    ++ + +    L K
Sbjct: 413 GTPFCITYDFDSVEDKAVTVRDRDTMEQVRMPISELKGFLEK 454


>gi|258620049|ref|ZP_05715089.1| prolyl-tRNA synthetase [Vibrio mimicus VM573]
 gi|258587782|gb|EEW12491.1| prolyl-tRNA synthetase [Vibrio mimicus VM573]
          Length = 459

 Score = 85.2 bits (209), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 27/166 (16%), Positives = 64/166 (38%), Gaps = 13/166 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           + R  + G I Q+  N  ++ N   ++S+ +     ++    +G  + R +   IE    
Sbjct: 293 LKRGIEVGHIFQLGTNYSAKMNCGVLDSNGKNA---ILEMGCYGIGVSRVVAAAIEQNHD 349

Query: 545 N----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +     P  ++P Q  +  +    +    E A+++   L +  + +  D R E       
Sbjct: 350 DYGIIWPDAIAPFQVAIVPMNMHKSERVQEAAEKLYAELTAAGIEVLFDDRKERPGVMFS 409

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +  +  +P  +I GD+   E     +   +   + V++   I  + 
Sbjct: 410 DMELIGVPHTVIIGDRSMDEGHFEYKNRRNGEKEAVAMESIIDFIQ 455



 Score = 75.2 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 49/123 (39%), Gaps = 2/123 (1%)

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQMF 401
              A+  + + SY++LP+ L +  + +R+E      G+MR R F+  DA+ F    E + 
Sbjct: 1   MITALVRNEVSSYKQLPLNLYQIQTKFRDERRPRF-GVMRAREFSMMDAYSFDIDKEGLQ 59

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
                +H      +   G +   V   +      GS      AE+    ++ + ++    
Sbjct: 60  KSYDAMHAAYCKAFDRMGLDYRPVLADSGAIGGNGSQEFHVLAESGEDLIVFSTESDYAA 119

Query: 462 RIN 464
            I 
Sbjct: 120 NIE 122


>gi|228476027|ref|ZP_04060735.1| glycine--tRNA ligase [Staphylococcus hominis SK119]
 gi|314936314|ref|ZP_07843661.1| glycine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
 gi|228269850|gb|EEK11330.1| glycine--tRNA ligase [Staphylococcus hominis SK119]
 gi|313654933|gb|EFS18678.1| glycine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
          Length = 463

 Score = 84.8 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 50/343 (14%), Positives = 105/343 (30%), Gaps = 49/343 (14%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    + +  +S  ++LP  + + G  +RNE +
Sbjct: 151 FNLMFKTFQGVTEGSTNELFLRPETAQGIFVNYKNVQRSMRKKLPFGIGQIGKSFRNEIT 210

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
              + + R R F Q +   FC   E++  +           +K F  + +          
Sbjct: 211 PG-NFIFRTREFEQMELEFFCKPGEEIEWQNY---------WKTFASQWLKDLNINEENM 260

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
           R+      + +           K         G+          + ++ LK         
Sbjct: 261 RLRDHDEEELSHYSNATTDIEYKFPFGWGELWGIAS--------RTDFDLK------KHS 306

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK---------- 543
                DF        ++    +EK  P  I     G+    +  + + +           
Sbjct: 307 EHSGEDF-------RYHDPETNEKYIPYCIE-PSLGADRVTLAFLCDAYDEEGVEGSKDA 358

Query: 544 ---GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
               +    L+P +A +  ++    E A +I   L S   S++ D   ++I  + R    
Sbjct: 359 RTVMHFHPALAPYKAAILPLSKKLSEEAIKIFEQLSSK-FSVDFDES-QSIGKRYRRQDE 416

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              P  I        +  + +R   S    ++ + +    L +
Sbjct: 417 IGTPYCITFDFDSLEDNQVTVRDRDSMEQVRMPISELETFLAE 459


>gi|323490068|ref|ZP_08095289.1| glycyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
 gi|323396364|gb|EGA89189.1| glycyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
          Length = 458

 Score = 84.8 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 49/331 (14%), Positives = 102/331 (30%), Gaps = 26/331 (7%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    + +  +S  +++P  +A+ G  +RNE +
Sbjct: 147 FNLMFKTFQGVTEASTNEIFLRPETAQGIFVNYKNVQRSMRKKMPFGIAQIGKSFRNEIT 206

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
              +   R R F Q +   FC   E +              ++DF    ++         
Sbjct: 207 PG-NFTFRTREFEQMELEFFCKPGEDLEWYAY---------WRDFSKNWLLNLNMNEDNM 256

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
           R+      + +      V    K         G+          + ++ LK     ++  
Sbjct: 257 RLREHDEDELSHYSNATVDIEYKFPFGWGELWGIAD--------RTDFDLK--RHMEYSG 306

Query: 494 GTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
                +D     RF  + +         V +   V    E  +    +         L+P
Sbjct: 307 EDFNYIDPVTNERFVPYCIEPSLGADR-VTLAFLVDAYHEEALENDDKRTVLKFHPALAP 365

Query: 553 IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
            +A V  ++    E A  +   L + H  ++ D   ++I  + R       P  I     
Sbjct: 366 YKAAVLPLSKKLAEGATGVFADL-AKHFMVDYDES-QSIGKRYRRQDEIGTPFCITYDFD 423

Query: 613 EASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              +  + +R   S    ++ + +    + K
Sbjct: 424 SVEDGQVTVRHRDSMEQTRMPIAEVQAYIEK 454


>gi|229014104|ref|ZP_04171225.1| Glycyl-tRNA synthetase [Bacillus mycoides DSM 2048]
 gi|229169638|ref|ZP_04297340.1| Glycyl-tRNA synthetase [Bacillus cereus AH621]
 gi|228613834|gb|EEK70957.1| Glycyl-tRNA synthetase [Bacillus cereus AH621]
 gi|228747058|gb|EEL96940.1| Glycyl-tRNA synthetase [Bacillus mycoides DSM 2048]
          Length = 458

 Score = 84.8 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 54/366 (14%), Positives = 110/366 (30%), Gaps = 55/366 (15%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
            E+  P    Q   +          N+        T        L+P    G    F + 
Sbjct: 130 HEVKCPDCGSQEFTEIRQF------NLMFKTFQGVTESSTNEIFLRPETAQGIFVNFKNV 183

Query: 352 LKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
            +S  ++LP  + + G  +RNE +   +   R R F Q +   FC   +           
Sbjct: 184 QRSMRKKLPFGIGQIGKSFRNEITPG-NFTFRTREFEQMELEFFCKPGEDLEWFAFWRET 242

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRVGSDAL--WDDAENIMKGVLDTIKNSSQDRINTGVL 468
             +     G  +  ++L        G D L  + +A   +       +         GV 
Sbjct: 243 CKNWLLSLGMTEESMRLRDH-----GEDELSHYSNATTDI-----EFRFPFGWGELWGVA 292

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
                    + ++ LK              DFN       +     +E+  P  I     
Sbjct: 293 S--------RTDFDLK------RHMEHSNEDFN-------YIDPQTNERYVPYCIE-PSL 330

Query: 529 GSIERFIGIMIENFKGNLP-----------LWLSPIQAIVTTITSSAVEYAQEIANLLKS 577
           G+    +  + + ++                 L+P +A +  ++    E A E+   L +
Sbjct: 331 GADRVTLAFLCDAYEEEQLENDSRTVLRFHPALAPYKAAILPLSKKLSEGATEVFAEL-A 389

Query: 578 HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
               ++ D    +I  + R       P  I        ++++ +R   +    ++ + + 
Sbjct: 390 KDFMVDFDETG-SIGKRYRRQDEIGTPFCITYDFDSVEDKAVTVRDRDTMEQVRMPISEL 448

Query: 638 IPILTK 643
              L K
Sbjct: 449 KGFLEK 454


>gi|229582573|ref|YP_002840972.1| Glycine--tRNA ligase [Sulfolobus islandicus Y.N.15.51]
 gi|228013289|gb|ACP49050.1| Glycine--tRNA ligase [Sulfolobus islandicus Y.N.15.51]
          Length = 473

 Score = 84.8 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 71/478 (14%), Positives = 161/478 (33%), Gaps = 89/478 (18%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLIS----Y 282
           +Q +  Q +     +   +  ++ +  ++    +       W   G  + Q +I     +
Sbjct: 2   SQIKYKQDVERFLRNFYVNSAEIYKGRNISGFID-------WLPPGAMLRQKIIDSWINF 54

Query: 283 MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK------------- 329
             +KI + +  ++   +L   +++ SGH  ++   +       +T +             
Sbjct: 55  FIKKIPNVFL-MDGSTILPLIVFEASGHLANFTDPVIKCPKCSNTYRVDHLLKETNGKLI 113

Query: 330 ---------------------------DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
                                      D    AL+P         F +      +LP  +
Sbjct: 114 CPRDLTDLKEQEIKQKSLMLELTVGLTDEINAALRPETAQNIYINFMNFKAIGLKLPFAI 173

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           A+ G  YRNE S       R+R F Q +   F     +  +   +++ +  I     +E+
Sbjct: 174 AQIGRSYRNEISPR---GSRLREFVQMEIEEFVLPSHL--DSHPLYDSVKEIRLPIFYEE 228

Query: 423 IMVKLSTRPEKRVG-----SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY-- 475
             +++      + G       A W   E   + + + +           V   E AFY  
Sbjct: 229 QTIEMELNEAVKKGLVPNVRLAFWIGREW--QWLTNELGLPGNKIRFRVVPPEERAFYSK 286

Query: 476 -GPKFEYILKDAI----GRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
                E  ++D      G  ++      D  + S+ +   ++ +    H V      FG 
Sbjct: 287 GTIDVEVNIEDDWVEIIGNAYRTD---YDLTVHSKHSGANLSENGMIPHVVE---PSFGL 340

Query: 531 IERFIGIMIENFKG-----NLPLW-----LSPIQAIVTTI--TSSAVEYAQEIANLLKSH 578
               + +++ N+       N PL+     +SP++  + +I  +   +  A+++   L+S 
Sbjct: 341 DRIAMAVLLLNYDPSPSDRNWPLFRIPYKISPLEVGIASIHHSDEYINVAEKVDLTLRSL 400

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
                  F    I  +  +     IP+++    K   E ++ IR   +    +V++ +
Sbjct: 401 GYVTFKLFEKGKIEAQYAKADTLGIPLVVTVDSKTLDENTVTIRNRDTKAQIRVNIRE 458


>gi|163942630|ref|YP_001647514.1| glycyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|229135744|ref|ZP_04264516.1| Glycyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
 gi|163864827|gb|ABY45886.1| glycyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|228647710|gb|EEL03773.1| Glycyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
          Length = 458

 Score = 84.8 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 54/366 (14%), Positives = 110/366 (30%), Gaps = 55/366 (15%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
            E+  P    Q   +          N+        T        L+P    G    F + 
Sbjct: 130 HEVKCPDCGSQEFTEIRQF------NLMFKTFQGVTESSTNEIFLRPETAQGIFVNFKNV 183

Query: 352 LKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
            +S  ++LP  + + G  +RNE +   +   R R F Q +   FC   +           
Sbjct: 184 QRSMRKKLPFGIGQIGKSFRNEITPG-NFTFRTREFEQMELEFFCKPGEDLEWFAFWRET 242

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRVGSDAL--WDDAENIMKGVLDTIKNSSQDRINTGVL 468
             +     G  +  ++L        G D L  + +A   +       +         GV 
Sbjct: 243 CKNWLLSLGMTEESMRLRDH-----GEDELSHYSNATTDI-----EFRFPFGWGELWGVA 292

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
                    + ++ LK              DFN       +     +E+  P  I     
Sbjct: 293 S--------RTDFDLK------RHMEHSNEDFN-------YIDPQTNERYVPYCIE-PSL 330

Query: 529 GSIERFIGIMIENFKGNLP-----------LWLSPIQAIVTTITSSAVEYAQEIANLLKS 577
           G+    +  + + ++                 L+P +A +  ++    E A E+   L +
Sbjct: 331 GADRVTLAFLCDAYEEEQLENDSRTVLRFHPALAPYKAAILPLSKKLSEGATEVFAEL-A 389

Query: 578 HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
               ++ D    +I  + R       P  I        ++++ +R   +    ++ + + 
Sbjct: 390 KDFMVDFDETG-SIGKRYRRQDEIGTPFCITYDFDSVEDKAVTVRDRDTMEQVRMPISEL 448

Query: 638 IPILTK 643
              L K
Sbjct: 449 KGFLEK 454


>gi|295132359|ref|YP_003583035.1| glycyl-tRNA synthetase [Zunongwangia profunda SM-A87]
 gi|294980374|gb|ADF50839.1| glycyl-tRNA synthetase [Zunongwangia profunda SM-A87]
          Length = 513

 Score = 84.8 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 62/378 (16%), Positives = 120/378 (31%), Gaps = 36/378 (9%)

Query: 275 IFQTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRA-NMFAVKCADDTIKDLRT 333
           I + L   +  +   D  +    ++        S +W   +  N+        +      
Sbjct: 154 ILERLAKSLTEENLAD-VKALIEELGIACPESGSKNWTDVKQFNLMFGTKLGASADSATD 212

Query: 334 FALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
             L+P    G    F +  K+   ++P  +A+ G  +RNE   +   + R R F Q +  
Sbjct: 213 LYLRPETAQGIFVNFANVQKTGRMKIPFGIAQIGKAFRNEIV-ARQFIFRQREFEQMEMQ 271

Query: 393 VFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKG 450
            F     E  + E  K            G EK       +      +    +        
Sbjct: 272 FFVRPGEELSWFEKWKETRQKWHASLGLGDEKYRFHDHEKLAHYANAATDIEFDFPFGFK 331

Query: 451 VLDTIKNSSQDRINTGVLLGEGA--FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
            L+ I + +   +            FY P         +G ++    I+    L   F A
Sbjct: 332 ELEGIHSRTDFDLKAHEEHSGKKLRFYDP--------EMGENYVPYVIETSIGLDRMFLA 383

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTI--TSSAVE 566
            +  S  E+       R V                  LP  L+P +A +  +       E
Sbjct: 384 VFSASLQEEDLGDGKSRTVL----------------KLPAVLAPTKAAILPLVKKDGLPE 427

Query: 567 YAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS 626
            AQEI   LK     ++ D ++  +  + R       P+ I        ++++ +R   +
Sbjct: 428 LAQEIVEELK-WDFRVQYDEKDA-VGRRYRRQDAAGTPLCITVDHDSLEDKTVTVRYRDT 485

Query: 627 TTTQKVSLLDAIPILTKE 644
              ++V + +   I+ +E
Sbjct: 486 MEQKRVPISELASIIDQE 503


>gi|330723942|gb|AEC46312.1| glycyl-tRNA synthetase [Mycoplasma hyorhinis MCLD]
          Length = 458

 Score = 84.8 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 63/339 (18%), Positives = 111/339 (32%), Gaps = 26/339 (7%)

Query: 310 HWDSYRANMFAVKCADDTIKDLR-TFALKPMNCPGHVAVFNHGLKSYR-ELPVRLAEFGS 367
            W+  +      +     ++D +    L+P    G    F +  +S R +LP  + + G 
Sbjct: 139 RWEEIKQFNLMFETQQGVVEDKKSKIFLRPETAQGIFINFKNIQRSMRLKLPFGIGQIGK 198

Query: 368 VYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKL 427
            +RNE +   + + R R F Q +  +FC  EQ         N I      F   KI   L
Sbjct: 199 SFRNEITPG-NFIFRTREFEQMELEIFCHPEQANQIFDDYLNKIQDFL--FNELKINKDL 255

Query: 428 STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI---NTGVLLGEGAFYGPKFEYILK 484
                 +    A +  A + +   L          +   +   L    A  G K +Y   
Sbjct: 256 VRVRHHKQEELAHYSLATSDI-EFLFLFGWGELIGLANRSDFDLKAHSAASGEKLDY--- 311

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
                        +D     +F  + +         ++     F   E+      +    
Sbjct: 312 -------------LDPFTNQKFFPYIIEPSMGVDRLLLAVLTNFYKEEKLEENEEKRSLL 358

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
            LP  LSP +  +  +       A EI NLL  + +S   D  N +I  + R        
Sbjct: 359 ALPYSLSPFKVAILPLVKKLSPKALEIYNLLLKNSISATFDE-NNSIGKRYRIQDAIGTY 417

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             I    +   + +I IR   S    ++++   +  L K
Sbjct: 418 FSITVDYQSLEDNTITIRERDSMKQSRIAIDQLLNFLEK 456


>gi|325662226|ref|ZP_08150841.1| glycyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA]
 gi|325471478|gb|EGC74699.1| glycyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA]
          Length = 462

 Score = 84.8 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 43/341 (12%), Positives = 101/341 (29%), Gaps = 46/341 (13%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPS 374
            N+        T     T  L+P    G    F +  + S +++P  +A+ G  +RNE +
Sbjct: 151 FNLMFKTFQGVTEDAKNTVYLRPETAQGIFVNFKNVQRTSRKKIPFGIAQVGKSFRNEIT 210

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              +   R R F Q +   FC                +      G ++  +++     + 
Sbjct: 211 PG-NFTFRTREFEQMELEFFCEPGTDLEWFAYWKKFCLDWLSSLGLKEEEIRVRDHSPEE 269

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           +     +  A + +                 G+            +    D         
Sbjct: 270 L---CFYSKATSDV-----EFLFPFGWGELWGIA-----------DRTDYDLS------- 303

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK----------- 543
                    S+ +  Y +   ++ +   +     G+    +  +   +            
Sbjct: 304 ----QHQEVSKQDLTYFDDEKKEKYIPYVIEPSLGADRMVLAFLCSAYDEEELEGGDTRT 359

Query: 544 -GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
             +    L+PI+  V  ++    E A+++   L     + E D R   I  + R      
Sbjct: 360 VMHFHPALAPIKIGVLPLSKKLNEGAEKVFAELSKT-YNCEFDDRGN-IGKRYRRQDEIG 417

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            P  +    +   + ++ +R   +   +++ + D      K
Sbjct: 418 TPFCVTYDFESEEDGAVTVRDRDTMEQERIKIEDLKAYFEK 458


>gi|170754288|ref|YP_001783158.1| glycyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
 gi|169119500|gb|ACA43336.1| glycyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
          Length = 463

 Score = 84.8 bits (208), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 57/349 (16%), Positives = 117/349 (33%), Gaps = 55/349 (15%)

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEP 373
           + N+        T        L+P    G    F +  + S +++P  +A+ G  +RNE 
Sbjct: 151 KFNLMFKTFQGVTEDAKSEIYLRPETAQGIFVNFKNVQRTSRKKVPFGIAQIGKSFRNEI 210

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP 431
           +   +   R R F Q +   FC    +  +    K +     I      E I  +  ++ 
Sbjct: 211 TPG-NFTFRTREFEQMELEFFCKPGTDLEWFNYWKDYCWNFLINLGINKENIRFRDHSQE 269

Query: 432 EKRVGSD--------------ALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           E    S+               LW  A+     +   +++S +D +N  +       Y P
Sbjct: 270 ELSHYSNATSDIEFLFPFGWGELWGVADRTDFDLKKHMEHSGED-LNY-LDPATKERYVP 327

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
              Y ++ ++G D       VD                +  + + +H             
Sbjct: 328 ---YCIEPSLGADRVVLAFLVDAYDEEEL------EGGDVRNVLHLH------------- 365

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
                       L+P +A V  ++    + +QE+ ++L     +I+ D    +I  + R 
Sbjct: 366 ----------PALAPFKAAVLPLSKKLSDKSQEVYSMLSKK-FNIDYDEAG-SIGKRYRR 413

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
                 P  I        + ++ IR   +    +VS+ + +    ++ L
Sbjct: 414 EDEIGTPYCITVDFDTLEDNTVTIRDRDTMNQIRVSINE-LEKFIEDKL 461


>gi|319935432|ref|ZP_08009869.1| glycyl-tRNA synthetase [Coprobacillus sp. 29_1]
 gi|319809648|gb|EFW06061.1| glycyl-tRNA synthetase [Coprobacillus sp. 29_1]
          Length = 458

 Score = 84.4 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 57/387 (14%), Positives = 134/387 (34%), Gaps = 56/387 (14%)

Query: 269 HRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTI 328
           H  GW+  + ++ Y+R         I  P    +           ++  M  VK A + +
Sbjct: 112 HSDGWE-PEKMMEYIRDH------HIKCPDCGSEDFTDIREFELMFKTYMGVVKDAKNVV 164

Query: 329 KDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
                  L+P    G    F +  + S +++P  + + G  +RNE +   + + R R F 
Sbjct: 165 ------YLRPETAQGIFVNFKNIQRTSRKKVPFGIGQIGKSFRNEITPG-NFIFRTREFE 217

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENI 447
           Q +   FC  +   +      +  +   KD G     ++     ++ +   + +  A + 
Sbjct: 218 QMELEFFCKPDTDLDWFHYWKDGCMQFLKDLGLTSENLRFRDHEQEEL---SFYSKATS- 273

Query: 448 MKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFN 507
                  I+      +  G L G         +    D                  S+ N
Sbjct: 274 ------DIEYLYPAPLGWGELWGVA-------DRTDYDLS-----------RHQEFSKKN 309

Query: 508 AFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK-----------GNLPLWLSPIQAI 556
             Y++  + + +   +     G+   F+ +  + +             +L   ++PI+A 
Sbjct: 310 LEYLDPETNQKYIPYVIEPSVGADRLFLSVFADAYDEEQLENDTRIVMHLHPAVAPIKAA 369

Query: 557 VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASE 616
           +  +T    + A E+ ++L +   ++E D   + I  + R       P  I       ++
Sbjct: 370 ILPLTKKQSDKAMEVYSML-AQDFNVEFDVAGQ-IGKRYRRQDAIGTPFCITVDFDSETD 427

Query: 617 RSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +++ +R   S    ++ + +    + +
Sbjct: 428 QTVTLRDRDSMEQIRLPIDELKSYIAE 454


>gi|168335374|ref|ZP_02693468.1| glycyl-tRNA synthetase [Epulopiscium sp. 'N.t. morphotype B']
          Length = 460

 Score = 84.4 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 64/389 (16%), Positives = 136/389 (34%), Gaps = 55/389 (14%)

Query: 277 QTLISYMRR----KIKDDYEEINTPQVLDQHLWQ-QSGHWDSY----RANMFAVKCADDT 327
           + +  YM+     +I D +        + ++  +  S H  ++    + N+        T
Sbjct: 101 KIIEDYMKENGVEEIVDGWSNEKMQDYIKENNIECPSCHAHNFTDIRQFNLMFKTFQGVT 160

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
                T  L+P    G    F +  + S +++P  + + G  +RNE +   + + R R F
Sbjct: 161 EDSKNTVYLRPETAQGIFVNFKNVQRTSRKKIPFGIGQIGKSFRNEITPG-NFIFRTREF 219

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
            Q +   FC         +   N+  S   + G ++  +++    ++ +   + + +A +
Sbjct: 220 EQMELEFFCKPGTELEWFVTWKNICKSWLLNLGIDEKSIRMRDHAKEEL---SHYSNATS 276

Query: 447 IMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF 506
            +       K         G+          + +Y LK              D N    F
Sbjct: 277 DI-----EFKFPFGWGELWGIAS--------RTDYDLK------QHMEHSGEDMNY---F 314

Query: 507 NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG------------NLPLWLSPIQ 554
           +       +EK  P  I     G+    +  + E +                   L+P++
Sbjct: 315 DPTT----NEKYIPYCIE-PSLGADRVTLAFLCEAYCEESLEDGDSRNIFKFHPALAPVK 369

Query: 555 AIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
           A +  ++    E A  I N+L  H  ++E D    +I  + R       P  I       
Sbjct: 370 AAILPLSKKLSEQALNIYNMLSDH-FNVEYDEAG-SIGKRYRRQDEIGTPFCITYDFDSK 427

Query: 615 SERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            + S+ IR   S   +++++ + +  +TK
Sbjct: 428 DDNSVTIRDRDSMKQERINIXEILKYITK 456


>gi|294155542|ref|YP_003559926.1| glycine--tRNA ligase [Mycoplasma crocodyli MP145]
 gi|291600446|gb|ADE19942.1| glycine--tRNA ligase [Mycoplasma crocodyli MP145]
          Length = 468

 Score = 84.4 bits (207), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 55/361 (15%), Positives = 112/361 (31%), Gaps = 46/361 (12%)

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
           ++ +      + +    + +      + N+        T        L+P    G    F
Sbjct: 136 EEMQIFLNEHMKEYEGSKATWGEIK-KFNLMFETKQGVTEDSKSKVYLRPETAQGIFINF 194

Query: 349 NHGLKSYR-ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
            + L++ R +LP+ + + G  +RNE +   + + R R F Q +  VFC  E   N     
Sbjct: 195 KNVLRTTRSKLPLGIGQIGKSFRNEVTPG-NFIFRTREFEQMELEVFCYPELASNTYEYY 253

Query: 408 HNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGV 467
                    + G    +++                D E +      T     +     G 
Sbjct: 254 IQKCYDFVINLGVSPKLIRKRVH------------DKEELSHYSAGTTDIEFEFPFGWGE 301

Query: 468 LLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAV 527
           LLG       + ++ LK                   +  +  Y++  + K     I    
Sbjct: 302 LLGIAN----RTDFDLKA--------------HMSATNESLEYLDPETNKKIIPFIIEPS 343

Query: 528 FGSIERFIGIM--------IENFKGNLPLW----LSPIQAIVTTITSSAVEYAQEIANLL 575
            G     + I+        +E+    + L     LSP +  +  +     + A+EI + L
Sbjct: 344 VGLDRLMLAILCAAYEEEKLEDGDTRIVLRLNKKLSPYKVAILPLVKKLGDKAKEIFDKL 403

Query: 576 KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
             + +    D    +I  + R          I        + S+ IR   +    ++ + 
Sbjct: 404 IENSVQATYDETG-SIGKRYRRQDAIGTFYCITIDYDSLEDDSVTIRERDTMNQTRIKID 462

Query: 636 D 636
           D
Sbjct: 463 D 463


>gi|167752473|ref|ZP_02424600.1| hypothetical protein ALIPUT_00724 [Alistipes putredinis DSM 17216]
 gi|167659542|gb|EDS03672.1| hypothetical protein ALIPUT_00724 [Alistipes putredinis DSM 17216]
          Length = 518

 Score = 84.4 bits (207), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 53/335 (15%), Positives = 109/335 (32%), Gaps = 30/335 (8%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T +   T  L+P    G    F +  K+   +LP  +A+ G  +RNE  
Sbjct: 198 FNLMFSTQMGSTAEGANTIYLRPETAQGIFVNFLNVQKTGRMKLPFGIAQIGKAFRNEIV 257

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
            +   + R+R F Q +   F     E  +    +   +       FG +        +  
Sbjct: 258 -ARQFIFRMREFEQMEMQFFVRPGEEMRWWAEWRDTRMKWHRALGFGADNYRFHDHDKLA 316

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
                    + A +I            +     G    EG      F+     +  + + 
Sbjct: 317 HYA------NAATDI------------EYNFPFGFKEVEGIHSRTDFDL----SNHQKFS 354

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
              IQ   +        YV   S     + +        E  +    E     +P  L+P
Sbjct: 355 GKKIQYFDSETGESYVPYVVETSIGVDRMFLQVMSAAYTEEKLENGEERVVLRIPAALAP 414

Query: 553 IQAIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
            +  V  +       E AQ I +LLK +  ++  D ++ ++  + R       P+ +   
Sbjct: 415 TKVAVLPLVKKDGMPEVAQRIVDLLK-YDFNVVYDEKD-SVGKRYRRQDAIGTPLCVTVD 472

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
            +   + ++ +R   +   ++V++     ++  E 
Sbjct: 473 GQTLEDNTVTVRHRDTMQQERVAIDALFGLVDAEC 507


>gi|225377160|ref|ZP_03754381.1| hypothetical protein ROSEINA2194_02806 [Roseburia inulinivorans DSM
           16841]
 gi|225211065|gb|EEG93419.1| hypothetical protein ROSEINA2194_02806 [Roseburia inulinivorans DSM
           16841]
          Length = 465

 Score = 84.4 bits (207), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 50/344 (14%), Positives = 108/344 (31%), Gaps = 49/344 (14%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPS 374
            N+        T     T  L+P    G    F +  + S +++P  + + G  +RNE +
Sbjct: 151 FNLMFKTFQGVTEDAKNTVYLRPETAQGIFVNFKNVQRTSRKKIPFGIGQIGKSFRNEIT 210

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              +   R R F Q +   FC                    +  G ++  ++L     + 
Sbjct: 211 PG-NFTFRTREFEQMELEFFCEPGTDLEWFQYWRGFCRDWLQTLGIKEDEMRLRDHSPEE 269

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           +                  +  +     I      G G  +G         A   D+   
Sbjct: 270 L------------------SFYSKGTTDIEFLFPFGWGELWGI--------ADRTDYDLT 303

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKG------ 544
             Q   N+  +   ++ +   E+  P +I     G+    +  +     E   G      
Sbjct: 304 RHQ---NVSGQDLTYFDDEKGERYIPYVIE-PSLGADRVVLAFLCAAYDEENIGTEEKPD 359

Query: 545 -----NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
                +    L+P++  V  ++    E A+++   L +   + E D R   I  + R   
Sbjct: 360 MRTVLHFHPALAPVKIGVLPLSKKLNEGAEKVYAQL-AKKYNCEFDDRGN-IGKRYRRQD 417

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
               P  +    +  ++ ++ +R   +   +++ + D      K
Sbjct: 418 EIGTPFCVTYDFESETDGAVTVRDRDTMEQERIKIEDLDAYFAK 461


>gi|330836946|ref|YP_004411587.1| glycyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
 gi|329748849|gb|AEC02205.1| glycyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
          Length = 444

 Score = 84.4 bits (207), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 59/422 (13%), Positives = 136/422 (32%), Gaps = 71/422 (16%)

Query: 270 RKGWKIFQTLISYMRRKIKDDYEEIN---TPQVLDQHLWQQSGHWDSYRANMFAVKCADD 326
             G ++   +  +  +++   +++I       ++   +W+ SGH  ++   M   K    
Sbjct: 37  PMGVELKNNIRDFWWKEMTQLHDDIVGLDASILMHPRVWEASGHVSNFTDPMVDCKQCKS 96

Query: 327 TIK--------------------DLRTF------------------ALKPMNCPGHVAVF 348
             +                    + R F                   L+P    G    F
Sbjct: 97  RFRADQIDLSAPCPVCGTKGSFTEPRNFNLMFQSHIGANTDSSSVVYLRPETAQGIYVDF 156

Query: 349 NHGLKSYR-ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK--EQMFNECL 405
            + ++S R ++P  +A+ G  +RNE + + + + R   F Q +   FC    E  +    
Sbjct: 157 KNVVQSSRVKVPFGIAQIGKSFRNEIT-TKNFIFRSCEFEQMEMQFFCKPGTEDEWFPYW 215

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMK-GVLDTIKNSSQDRIN 464
           +     +  Y   G     ++         G D L   A++      L  +     + ++
Sbjct: 216 R--GQRMDFYIRMGIRPESLRWHQH-----GPDELAFYAKDAYDIQFLFPMGWQELEGVH 268

Query: 465 TGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIH 524
           +                  +   G+D       +D     R+  + V + +     V++ 
Sbjct: 269 SRTDYDLSQH---------QTFSGKDQS----YLDPETNDRYIPYVVETSAGLTRNVLMA 315

Query: 525 RAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTI--TSSAVEYAQEIANLLKSHHLSI 582
            +     E  I         +    ++P++  V  +       EYAQ++   L+    ++
Sbjct: 316 LSD-AYDEEEIAPGDVRTVLHFHPAIAPVKVAVLPLVKKDGLDEYAQKLEKELRE-DYTV 373

Query: 583 ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             D R+  I  + R       P  +    +   + ++ +R   S    +V +      + 
Sbjct: 374 FFD-RSGAIGRRYRRQDEIGTPYCVTVDYQTLEDNTVTLRFRDSMEQVRVPVAGIAARIK 432

Query: 643 KE 644
           +E
Sbjct: 433 QE 434


>gi|91087801|ref|XP_967436.1| PREDICTED: similar to GA14359-PA [Tribolium castaneum]
 gi|270010754|gb|EFA07202.1| hypothetical protein TcasGA2_TC010209 [Tribolium castaneum]
          Length = 342

 Score = 84.1 bits (206), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 41/238 (17%), Positives = 89/238 (37%), Gaps = 21/238 (8%)

Query: 21  ATGSDVAESISRSLAKKAVAVAING-KVCDLSDPVRE-GSIEIITPEDPRS---LAVIRH 75
           +T  D A  +   +A+++    +N   +  +  P+ +   ++ +  +  +      +   
Sbjct: 82  STPYDCARHLGEKIAEQSAVALLNNDTLWHMHKPLPDTCKLQFLHYKVAQPSSVNKIFWR 141

Query: 76  SCAHIMAEAVQSIWPE-----VQVAIGPIIEDG-FYYDFDK---EQPFSSDELAQIEKKM 126
           +C+ ++     + + +     +     P +  G F YD          + +EL  +  +M
Sbjct: 142 TCSFVLGAVASNSFKDDVKVQLHSFPSPNVRSGSFVYDVQLSLENWQPTQNELKVLSIEM 201

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN--VTLYRQGEWFDLCR 184
            +   ++       +S E A +L   +   +K + + +I A  N  VTL+R G   D+ R
Sbjct: 202 IKFCQKNHAIHCMDVSQELALDL--FRNNTHKYQQIPNIAANHNGKVTLFRAGHHIDISR 259

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
           GP V +T    +      +       D     + R  G A      +  + Y L E  
Sbjct: 260 GPMVANTSHFGRITVANVIK---LETDIPGGPIYRFQGVALPRSIVMNHFAYSLLEER 314


>gi|126663425|ref|ZP_01734422.1| histidyl-tRNA synthetase [Flavobacteria bacterium BAL38]
 gi|126624373|gb|EAZ95064.1| histidyl-tRNA synthetase [Flavobacteria bacterium BAL38]
          Length = 474

 Score = 84.1 bits (206), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 56/346 (16%), Positives = 108/346 (31%), Gaps = 68/346 (19%)

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           E P +  +   V+R +         R R F Q DA V  +      + +++  L  S++ 
Sbjct: 137 EFPFKRYQIQPVWRADRPQK----GRFREFYQCDADVVGS--NSLWQEVELVQLYDSVFS 190

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIM--KGVLDTIKNSSQDRINTGVLLGEGA- 473
             G   + +K++ R     G   +   ++ ++     LD +    +D +   +L    + 
Sbjct: 191 QLGLNGVTIKINNRKILS-GIAEVIGASDKLIDFTVALDKLDKIGEDGVKKEMLEKGISE 249

Query: 474 -----------FYGP---KFE--------------------YILKDAIGRDWQCGTIQVD 499
                      F G    K E                    +I  +      Q   + +D
Sbjct: 250 TAIEKVQPLFNFTGTINEKIEKLAVLLANSEEGMKGVNELQFICDNVSTLGLQTAFLDLD 309

Query: 500 FNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF-----------------------IG 536
             L    N +Y  +  E   P  +     G   R+                       I 
Sbjct: 310 VTLARGLN-YYTGAIFEVAAPKGVAMGSIGGGGRYDDLTGIFGLKNMSGVGISFGLDRIA 368

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           ++IE         L+  +A+          YA +    L+   + +E    N  I  + +
Sbjct: 369 LVIEELGLFPEAVLATSKALFLNFGDKEALYAMQAIGKLRQAGIKVELYPDNAKIGKQFQ 428

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
               + IP  ++ G++E       I+   S   QKV     + +L 
Sbjct: 429 HADKRGIPFTVLVGEEEIQNNQYAIKNLASGEQQKVDFETLVALLK 474


>gi|301056404|ref|YP_003794615.1| glycyl-tRNA synthetase [Bacillus anthracis CI]
 gi|300378573|gb|ADK07477.1| glycyl-tRNA synthetase [Bacillus cereus biovar anthracis str. CI]
          Length = 458

 Score = 84.1 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 53/366 (14%), Positives = 110/366 (30%), Gaps = 55/366 (15%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
            E+  P    +   +          N+        T        L+P    G    F + 
Sbjct: 130 HEVKCPDCGSEEFTEIRQF------NLMFKTFQGVTESSTNEIFLRPETAQGIFVNFKNV 183

Query: 352 LKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
            +S  ++LP  + + G  +RNE +   +   R R F Q +   FC   +           
Sbjct: 184 QRSMRKKLPFGIGQIGKSFRNEITPG-NFTFRTREFEQMELEFFCKPGEDLEWFAFWRET 242

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRVGSDAL--WDDAENIMKGVLDTIKNSSQDRINTGVL 468
             +     G  +  ++L        G + L  + +A   +       K         GV 
Sbjct: 243 CKNWLLSLGMTEESMRLRDH-----GEEELSHYSNATTDI-----EFKFPFGWGELWGVA 292

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
                    + ++ LK              DFN       +     +E+  P  I     
Sbjct: 293 S--------RTDFDLK------RHMEHSNEDFN-------YIDPQTNERYVPYCIE-PSL 330

Query: 529 GSIERFIGIMIENFKGNLP-----------LWLSPIQAIVTTITSSAVEYAQEIANLLKS 577
           G+    +  + + ++                 L+P +A +  ++    E A E+   L +
Sbjct: 331 GADRVTLAFLCDAYEEEQLENDSRTVLRFHPALAPYKAAILPLSKKLSEGATEVFAEL-A 389

Query: 578 HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
               ++ D    +I  + R       P  I        ++++ +R   +    ++ + + 
Sbjct: 390 KDFMVDFDETG-SIGKRYRRQDEIGTPFCITYDFDSVEDKAVTVRDRDTMEQVRMPISEL 448

Query: 638 IPILTK 643
              L K
Sbjct: 449 KGFLEK 454


>gi|13508141|ref|NP_110090.1| prolyl-tRNA synthetase [Mycoplasma pneumoniae M129]
 gi|2501039|sp|P75382|SYP_MYCPN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|1674123|gb|AAB96084.1| putative prolyl-tRNA synthetase [Mycoplasma pneumoniae M129]
          Length = 483

 Score = 84.1 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 55/352 (15%), Positives = 113/352 (32%), Gaps = 58/352 (16%)

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
               ++  H + +   +F ++    T K      L+P +      ++     SY+ LPV 
Sbjct: 88  SEYQKEKRHVEGFNPELFLIEQIG-TKKLHDPLVLRPTSEIAFCNLWKKQSFSYQNLPVI 146

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISIYKDFGF 420
             ++  V+R E   +    +R   F   + H +F       +  +    L   I  +   
Sbjct: 147 YNQWTCVFRAEK--NTRPFLRNSEFYWQETHGLFSDGVNSESAAIAFWKLYQDIIVNQLC 204

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
               V L +  E+  G+   W                                      E
Sbjct: 205 IPAFVGLKSPNERFAGAQNTW------------------------------------TVE 228

Query: 481 YILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
            I+ D  G+  QC T   +       F   + N  +++  P        G   R +G ++
Sbjct: 229 SIMPD--GQALQCATSHDLGQTFTKPFGLTFQNQANQQAIPYSFSC---GISTRILGALL 283

Query: 540 ----ENFKGNLPLWLSPIQAIVT----TITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
               ++F   LP  ++PIQ  +        +  VE AQ++  LL+   +  +       +
Sbjct: 284 LTHSDDFGLVLPWKVAPIQVKLYLFDKKGDTKTVELAQKVQTLLEQLAIRFQFIKVENQL 343

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             ++ +  +  IP  +I      + +++ I    +      S         +
Sbjct: 344 GKQLGQGEVNGIPFQLIV----DNPQTVNIFNRLTRVKTAYSFEQLASRFVE 391


>gi|331268359|ref|YP_004394851.1| glycyl-tRNA synthetase [Clostridium botulinum BKT015925]
 gi|329124909|gb|AEB74854.1| glycyl-tRNA synthetase [Clostridium botulinum BKT015925]
          Length = 463

 Score = 84.1 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 49/335 (14%), Positives = 107/335 (31%), Gaps = 50/335 (14%)

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEP 373
           R N+        T        L+P    G    F +  + S +++P  + + G  +RNE 
Sbjct: 151 RFNLMFKTFQGVTEDTTSEIYLRPETAQGIFVNFKNAQRTSRKKVPFGIGQIGKSFRNEI 210

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP 431
           +   +   R R F Q +   FC    +  +    K +        D G  +  ++     
Sbjct: 211 TPG-NFTFRTREFEQMELEFFCKPGTDLEWFHYWKDYC--WKFLLDLGMTEENLRFRDHG 267

Query: 432 EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDW 491
           E+ +   + + +A + +   L          I       +   Y  K             
Sbjct: 268 EEEL---SFYSNATSDI-EFLFPFGWGELWGI------ADRTDYDLK------------- 304

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP---- 547
               ++      +  +       +EK  P +I     G+    +  +++ +         
Sbjct: 305 --KHMEHSGQELTYLDPTT----NEKYVPYVIE-PSLGADRVALAFLVDAYDEEELENGD 357

Query: 548 --------LWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
                     L+P +A +  ++    E A E+ + L     +I+ D    +I  + R   
Sbjct: 358 TRTVLRLHPALAPFKAAILPLSKKLSEKALEVYSKLSKK-FNIDYDEAG-SIGKRYRRED 415

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
               P  I        + ++ +R   + T  ++S+
Sbjct: 416 EIGTPYCITVDFDTLEDNTVTVRDRDNMTQVRLSI 450


>gi|169333783|ref|ZP_02860976.1| hypothetical protein ANASTE_00168 [Anaerofustis stercorihominis DSM
           17244]
 gi|169259632|gb|EDS73598.1| hypothetical protein ANASTE_00168 [Anaerofustis stercorihominis DSM
           17244]
          Length = 548

 Score = 84.1 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 84/201 (41%), Gaps = 2/201 (0%)

Query: 55  REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPF 114
           ++ + E +         +   +   ++A + + ++ + +++IG  +  G ++++  E   
Sbjct: 51  KDSTFEFVYINSSLGKKIYEKTLLFLLAVSSKQVFKDREISIGYSLGGGIFFEYTDESDL 110

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
           S +++ +++ +M++II  +    K   + E  +   +        E++        +TLY
Sbjct: 111 SEEDIKKLKYEMKKIIEDNYDINKLKTTREDMKASIDKNIFLTNKELV-DCLRDGILTLY 169

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRG-DSNRPMLSRIYGTAWNTQQELTQ 233
             G  +    G  + STG +K F  +    GA   G D   P     +       +E  +
Sbjct: 170 ELGGAYGYFYGDLLPSTGYLKVFDIIKYNHGAILLGCDKTHPDKVHEFFDNPKLFEEYEE 229

Query: 234 YLYFLEESEKRDHRKLAREMD 254
           +  +L++    +   L ++++
Sbjct: 230 FDKWLKDVGVTNIASLNKKIE 250


>gi|168704219|ref|ZP_02736496.1| glycyl-tRNA synthetase [Gemmata obscuriglobus UQM 2246]
          Length = 554

 Score = 84.1 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 61/406 (15%), Positives = 122/406 (30%), Gaps = 37/406 (9%)

Query: 270 RKGWKIFQTLISYMRRKIKD-----------DYEEINTPQVLDQHLWQQSGHWDSYRANM 318
                  + L SY+++   +              E+    V+   +       +    N+
Sbjct: 144 PAMKAAVKKLESYIKKHKIEANKVFKPLLSLGSPEVILAHVIGPDVDVPGTLTEPRAFNL 203

Query: 319 FAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR-ELPVRLAEFGSVYRNEPSGSL 377
                A     D     L+P    G  A + + L S R +LP  +A+ G  +RNE +   
Sbjct: 204 MFESHAGPIASDENKVYLRPETAQGIFANYKNVLDSSRLKLPFGIAQVGKAFRNEINPR- 262

Query: 378 HGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE-----KIMVKLSTRPE 432
           +   R R F Q +   FC  ++         +L    Y   G +                
Sbjct: 263 NFTFRSREFEQMEIEFFCHPDESMKWYQYWRDLRKKWYSTLGIQSGNLVPREQGKEELAH 322

Query: 433 KRVGSDAL-----WDDAENIMKGV-------LDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
             +G+  +     + D    ++GV       L      S   +      G  A    + E
Sbjct: 323 YSIGTTDIEYLFPFSDEPQELEGVAHRGNFDLSAHAKHSGKDLGYFDEEGWNALLQTRLE 382

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH---PVMIHRAVFGSIERFIGI 537
               D   R+ +   ++ +     +F    +   +        V+       S+    G 
Sbjct: 383 PFKDDKAKREEEKKKLEKEEKARFQFVPHVIEPSAGADRFTLAVLCEAYSEDSVPDAKGG 442

Query: 538 MIENFKGNLPLWLSPIQAIV--TTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
                       L+PI+A +          E A+E+   LK +  ++  D     I  + 
Sbjct: 443 TETRIVMRFHPRLAPIKAAIFPLVNKDGMDEAAKELYRELKPY-FNVVYDQSGA-IGRRY 500

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           R       P  I        + ++ +R   +   +++   +    +
Sbjct: 501 RRQDEAGTPFCITVDGDTMKDGTVTLRDRDTLKQERIPKGEVRARI 546


>gi|322697644|gb|EFY89422.1| prolyl-tRNA synthetase [Metarhizium acridum CQMa 102]
          Length = 506

 Score = 84.1 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 61/153 (39%), Gaps = 6/153 (3%)

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
               ++   +  + LW++SG  D   +     +  D   +      L P +      +  
Sbjct: 5   GASRLSLSTITSEELWRRSGRLDRVSSEAQLFRLTD---RKQVPIMLSPTHEEEITTLVA 61

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
             LKS+++LP+RL +    YR+E     HGL+R R F   D + F T  +   +  K  +
Sbjct: 62  SALKSFKDLPLRLYQTTRKYRDEMRPR-HGLLRSREFIMKDLYTFDTSFESAIDTYKCVS 120

Query: 410 LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWD 442
                +  F   +I + ++      +G D   +
Sbjct: 121 RAYRAF--FAEMRIPILVAEASSGDMGGDYSHE 151



 Score = 66.0 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 56/161 (34%), Gaps = 12/161 (7%)

Query: 487 IGRDWQCGT-IQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG- 544
           I R  + G    +       F       +S+   PV +     G   R  G + E+    
Sbjct: 337 IHRALELGHTFYLGSRYSKPFELSVTFPNSKAPVPVEMGCYGIGVS-RIFGAVAEHKADE 395

Query: 545 ---NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSH-----HLSIETDFRNETINYKIR 596
              N P  ++P + +V   TS       E  + L S            D R ET  +K++
Sbjct: 396 RGLNWPRAIAPFEIVVIP-TSGVNSQTLEFHDKLTSWSSSGPGFDAVLDDRKETFGWKMQ 454

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
           +  +   P+ I+ G          ++    ++ + +++ D 
Sbjct: 455 DADMTGYPVTIVLGKAWRERGVCEVQCRSLSSKENIAVEDL 495


>gi|183220295|ref|YP_001838291.1| glycyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
 gi|167778717|gb|ABZ97015.1| Glycyl-tRNA synthetase (Glycine--tRNA ligase; GlyRS) [Leptospira
           biflexa serovar Patoc strain 'Patoc 1 (Paris)']
          Length = 494

 Score = 84.1 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 52/349 (14%), Positives = 105/349 (30%), Gaps = 59/349 (16%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPS 374
            N+        + +      L+P    G    F +    + +++P  +A+ G  +RNE  
Sbjct: 181 FNLMFKTSHGASEEGATDIYLRPETAQGIFINFKNVTQIARKKVPFGIAQIGKSFRNEI- 239

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD---FGFEKIMVKLSTRP 431
            +   + R R F Q +   FC             +  +    +      E + V+   + 
Sbjct: 240 MARQFIFRTREFEQMEMEFFCEPGTQKEWFKYWVDYCMDWLVNVVGLKKENLRVREHEKE 299

Query: 432 EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDW 491
           E    SD+  D                    I      G G  +G               
Sbjct: 300 ELSFYSDSTSD--------------------IEYKYPFGWGELWGVA------------- 326

Query: 492 QCGTIQVDFNLPSRF---NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK----- 543
                  D      F   +  Y +   +K +   +     G    F+ ++ + ++     
Sbjct: 327 --SRTDYDLTQHETFSSEDLKYHDLDQKKKYLPYVVEPALGLNRLFLAVLCDAYEEEKLE 384

Query: 544 -------GNLPLWLSPIQAIV--TTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
                        +SP++  +            A+EI   L++H   ++ D     I  +
Sbjct: 385 KDDIRTVLRFGKRVSPMKVAIFPLMKKDGLDAKAKEIYTDLRNH-WYVDYDDSGA-IGKR 442

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            R H     P  I       S+ ++ IR   S   +++++ D    L +
Sbjct: 443 YRRHDEIGTPFCITVDYDTMSDGTVTIRERDSMKQERIAVADLKSYLIQ 491


>gi|229062588|ref|ZP_04199898.1| Glycyl-tRNA synthetase [Bacillus cereus AH603]
 gi|228716691|gb|EEL68387.1| Glycyl-tRNA synthetase [Bacillus cereus AH603]
          Length = 458

 Score = 84.1 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 54/366 (14%), Positives = 110/366 (30%), Gaps = 55/366 (15%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
            E+  P    Q   +          N+        T        L+P    G    F + 
Sbjct: 130 HEVKCPDCGSQEFTEIRQF------NLMFKTFQGVTESSTNEIFLRPETAQGIFVNFKNV 183

Query: 352 LKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
            +S  ++LP  + + G  +RNE +   +   R R F Q +   FC   +           
Sbjct: 184 QRSMRKKLPFGIGQIGKSFRNEITPG-NFTFRTREFEQMELEFFCKPGEDLEWFAFWRET 242

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRVGSDAL--WDDAENIMKGVLDTIKNSSQDRINTGVL 468
             +     G  +  ++L        G D L  + +A   +       +         GV 
Sbjct: 243 CKNWLLSLGMTEESMRLRDH-----GEDELSHYSNATTDI-----EFRFPFGWGELWGVA 292

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
                    + ++ LK              DFN       +     +E+  P  I     
Sbjct: 293 S--------RTDFDLK------RHMEHSNEDFN-------YIDPQTNERYVPYCIE-PSL 330

Query: 529 GSIERFIGIMIENFKGNLP-----------LWLSPIQAIVTTITSSAVEYAQEIANLLKS 577
           G+    +  + + ++                 L+P +A +  ++    E A E+   L +
Sbjct: 331 GADRVTLAFLCDAYEEEQLENDSRTVLRFHPALAPYKAAILPLSKKLSEGATEVFAEL-A 389

Query: 578 HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
               ++ D    +I  + R       P  I        ++++ +R   +    ++ + + 
Sbjct: 390 KDFVVDFDETG-SIGKRYRRQDEIGTPFCITYDFDSVEDKAVTVRDRDTMEQVRMPISEL 448

Query: 638 IPILTK 643
              L K
Sbjct: 449 KGFLEK 454


>gi|65316905|ref|ZP_00389864.1| COG0423: Glycyl-tRNA synthetase (class II) [Bacillus anthracis str.
           A2012]
 gi|228917544|ref|ZP_04081089.1| Glycyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|228936204|ref|ZP_04099004.1| Glycyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228981598|ref|ZP_04141894.1| Glycyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228988159|ref|ZP_04148257.1| Glycyl-tRNA synthetase [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
 gi|229124457|ref|ZP_04253644.1| Glycyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|229141633|ref|ZP_04270164.1| Glycyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
 gi|229158516|ref|ZP_04286576.1| Glycyl-tRNA synthetase [Bacillus cereus ATCC 4342]
 gi|229199064|ref|ZP_04325747.1| Glycyl-tRNA synthetase [Bacillus cereus m1293]
 gi|228584335|gb|EEK42470.1| Glycyl-tRNA synthetase [Bacillus cereus m1293]
 gi|228624952|gb|EEK81719.1| Glycyl-tRNA synthetase [Bacillus cereus ATCC 4342]
 gi|228641831|gb|EEK98131.1| Glycyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
 gi|228659005|gb|EEL14658.1| Glycyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|228771570|gb|EEM20038.1| Glycyl-tRNA synthetase [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
 gi|228778083|gb|EEM26354.1| Glycyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228823451|gb|EEM69283.1| Glycyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228842111|gb|EEM87213.1| Glycyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
          Length = 455

 Score = 84.1 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 53/366 (14%), Positives = 110/366 (30%), Gaps = 55/366 (15%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
            E+  P    +   +          N+        T        L+P    G    F + 
Sbjct: 127 HEVKCPDCGSEEFTEIRQF------NLMFKTFQGVTESSTNEIFLRPETAQGIFVNFKNV 180

Query: 352 LKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
            +S  ++LP  + + G  +RNE +   +   R R F Q +   FC   +           
Sbjct: 181 QRSMRKKLPFGIGQIGKSFRNEITPG-NFTFRTREFEQMELEFFCKPGEDLEWFAFWRET 239

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRVGSDAL--WDDAENIMKGVLDTIKNSSQDRINTGVL 468
             +     G  +  ++L        G + L  + +A   +       K         GV 
Sbjct: 240 CKNWLLSLGMTEESMRLRDH-----GEEELSHYSNATTDI-----EFKFPFGWGELWGVA 289

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
                    + ++ LK              DFN       +     +E+  P  I     
Sbjct: 290 S--------RTDFDLK------RHMEHSNEDFN-------YIDPQTNERYVPYCIE-PSL 327

Query: 529 GSIERFIGIMIENFKGNLP-----------LWLSPIQAIVTTITSSAVEYAQEIANLLKS 577
           G+    +  + + ++                 L+P +A +  ++    E A E+   L +
Sbjct: 328 GADRVTLAFLCDAYEEEQLENDSRTVLRFHPALAPYKAAILPLSKKLSEGATEVFAEL-A 386

Query: 578 HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
               ++ D    +I  + R       P  I        ++++ +R   +    ++ + + 
Sbjct: 387 KDFMVDFDETG-SIGKRYRRQDEIGTPFCITYDFDSVEDKAVTVRDRDTMEQVRMPISEL 445

Query: 638 IPILTK 643
              L K
Sbjct: 446 KGFLEK 451


>gi|325283748|ref|YP_004256289.1| glycyl-tRNA synthetase [Deinococcus proteolyticus MRP]
 gi|324315557|gb|ADY26672.1| glycyl-tRNA synthetase [Deinococcus proteolyticus MRP]
          Length = 506

 Score = 84.1 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 60/363 (16%), Positives = 117/363 (32%), Gaps = 43/363 (11%)

Query: 307 QSGHWDSYRANMFAVKCADDTIKDLRTFAL-KPMNCPGHVAVFNHGLKS-YRELPVRLAE 364
           + G W   R      K +   + D  +F   +P    G    F + + S  R LP  +A+
Sbjct: 156 EVGEWTEPRPFNMMFKTSIGPVADEDSFGYLRPETAQGIFVNFKNVVDSTSRRLPFGIAQ 215

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
            G  +RNE +   + + RVR   Q +   FCT               ++ +++ G  +  
Sbjct: 216 IGKAFRNEITPR-NFVFRVREMEQMEIEFFCTPGTDEEWHAHWLEKRLTWWEEQGVPREK 274

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           + +   P+      A +      +     T+ +   + I        G+           
Sbjct: 275 IIVEDVPK---DDLAHYSKRTYDLMYDFPTLGHDEIEGIANRTDFDLGSH---------- 321

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF-- 542
              G++    T QV  N  S       +  + K     +     G     + ++ E +  
Sbjct: 322 -TKGQEELGLTAQVMENSDSVAKLTIPHPETNKPVVPFVIEPSAGVDRALLAVLSEAYCK 380

Query: 543 ----------KGNLPLWLSPIQAIVTT---ITSSAVEYAQEIANLLKSHH-LSIETDFRN 588
                        L   L+PI+  V          V+ A+ I   L+      I  +   
Sbjct: 381 ETLENGNERTVLKLKPHLAPIKVAVIPLARNKPELVDLARRIKADLQKLGLGRILLEDSG 440

Query: 589 ETINYKIREHSIKKIPIIIIC-------GDK-EAS-ERSIGIRRFGSTTTQKVSLLDAIP 639
             I    R H     P  +         G+  +A+ + ++ +R   +   ++V++ D   
Sbjct: 441 N-IGKAYRRHDEVGTPYCVTVDFDTAGLGENVDAALKGTVTVRNRDTLEQERVAIADLAA 499

Query: 640 ILT 642
            L 
Sbjct: 500 WLQ 502


>gi|30264956|ref|NP_847333.1| glycyl-tRNA synthetase [Bacillus anthracis str. Ames]
 gi|42784099|ref|NP_981346.1| glycyl-tRNA synthetase [Bacillus cereus ATCC 10987]
 gi|47530451|ref|YP_021800.1| glycyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|47566949|ref|ZP_00237666.1| glycyl-tRNA synthetase [Bacillus cereus G9241]
 gi|49187774|ref|YP_031027.1| glycyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|52140610|ref|YP_086219.1| glycyl-tRNA synthetase [Bacillus cereus E33L]
 gi|118480007|ref|YP_897158.1| glycyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|165870894|ref|ZP_02215546.1| glycyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167634943|ref|ZP_02393261.1| glycyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|167639989|ref|ZP_02398257.1| glycyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|170685642|ref|ZP_02876865.1| glycyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|170707043|ref|ZP_02897500.1| glycyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|177652334|ref|ZP_02934837.1| glycyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190567164|ref|ZP_03020079.1| glycyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|196032884|ref|ZP_03100297.1| glycyl-tRNA synthetase [Bacillus cereus W]
 gi|196040501|ref|ZP_03107801.1| glycine--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|196044021|ref|ZP_03111258.1| glycyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|206976453|ref|ZP_03237360.1| glycyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217962381|ref|YP_002340953.1| glycyl-tRNA synthetase [Bacillus cereus AH187]
 gi|218906113|ref|YP_002453947.1| glycyl-tRNA synthetase [Bacillus cereus AH820]
 gi|222098368|ref|YP_002532426.1| glycyl-tRNA synthetase [Bacillus cereus Q1]
 gi|225866890|ref|YP_002752268.1| glycyl-tRNA synthetase [Bacillus cereus 03BB102]
 gi|227817684|ref|YP_002817693.1| glycyl-tRNA synthetase [Bacillus anthracis str. CDC 684]
 gi|228929941|ref|ZP_04092954.1| Glycyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228942077|ref|ZP_04104618.1| Glycyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228948637|ref|ZP_04110915.1| Glycyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228975007|ref|ZP_04135567.1| Glycyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|229187155|ref|ZP_04314301.1| Glycyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
 gi|229602508|ref|YP_002869159.1| glycine--tRNA ligase [Bacillus anthracis str. A0248]
 gi|254687247|ref|ZP_05151104.1| glycyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066]
 gi|254725260|ref|ZP_05187043.1| glycyl-tRNA synthetase [Bacillus anthracis str. A1055]
 gi|254735416|ref|ZP_05193124.1| glycyl-tRNA synthetase [Bacillus anthracis str. Western North
           America USA6153]
 gi|254740683|ref|ZP_05198374.1| glycyl-tRNA synthetase [Bacillus anthracis str. Kruger B]
 gi|254753055|ref|ZP_05205091.1| glycyl-tRNA synthetase [Bacillus anthracis str. Vollum]
 gi|254761397|ref|ZP_05213418.1| glycyl-tRNA synthetase [Bacillus anthracis str. Australia 94]
 gi|300117973|ref|ZP_07055730.1| glycyl-tRNA synthetase [Bacillus cereus SJ1]
 gi|59798501|sp|Q632E8|SYG_BACCZ RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|59798563|sp|Q72YG8|SYG_BACC1 RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|59798583|sp|Q81XT3|SYG_BACAN RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|30259633|gb|AAP28819.1| glycine--tRNA ligase [Bacillus anthracis str. Ames]
 gi|42740030|gb|AAS43954.1| glycyl-tRNA synthetase [Bacillus cereus ATCC 10987]
 gi|47505599|gb|AAT34275.1| glycyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|47556267|gb|EAL14601.1| glycyl-tRNA synthetase [Bacillus cereus G9241]
 gi|49181701|gb|AAT57077.1| glycyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|51974079|gb|AAU15629.1| glycine--tRNA ligase (glycyl-tRNA synthetase) [Bacillus cereus
           E33L]
 gi|118419232|gb|ABK87651.1| glycyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|164713403|gb|EDR18928.1| glycyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167512070|gb|EDR87448.1| glycyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|167529693|gb|EDR92442.1| glycyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|170128146|gb|EDS97016.1| glycyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|170670106|gb|EDT20846.1| glycyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|172082340|gb|EDT67406.1| glycyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190561668|gb|EDV15638.1| glycyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|195994313|gb|EDX58268.1| glycyl-tRNA synthetase [Bacillus cereus W]
 gi|196025357|gb|EDX64027.1| glycyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|196028633|gb|EDX67240.1| glycine--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|206745377|gb|EDZ56777.1| glycyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217067915|gb|ACJ82165.1| glycyl-tRNA synthetase [Bacillus cereus AH187]
 gi|218535956|gb|ACK88354.1| glycyl-tRNA synthetase [Bacillus cereus AH820]
 gi|221242427|gb|ACM15137.1| glycine--tRNA ligase (glycyl-tRNA synthetase) [Bacillus cereus Q1]
 gi|225789327|gb|ACO29544.1| glycine--tRNA ligase [Bacillus cereus 03BB102]
 gi|227002360|gb|ACP12103.1| glycine--tRNA ligase [Bacillus anthracis str. CDC 684]
 gi|228596324|gb|EEK53998.1| Glycyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
 gi|228784712|gb|EEM32731.1| Glycyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228810944|gb|EEM57287.1| Glycyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228817593|gb|EEM63677.1| Glycyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228829717|gb|EEM75341.1| Glycyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|229266916|gb|ACQ48553.1| glycine--tRNA ligase [Bacillus anthracis str. A0248]
 gi|298724627|gb|EFI65312.1| glycyl-tRNA synthetase [Bacillus cereus SJ1]
 gi|324328794|gb|ADY24054.1| glycyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus
           YBT-020]
 gi|326942679|gb|AEA18575.1| Glycyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 458

 Score = 84.1 bits (206), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 53/366 (14%), Positives = 110/366 (30%), Gaps = 55/366 (15%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
            E+  P    +   +          N+        T        L+P    G    F + 
Sbjct: 130 HEVKCPDCGSEEFTEIRQF------NLMFKTFQGVTESSTNEIFLRPETAQGIFVNFKNV 183

Query: 352 LKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
            +S  ++LP  + + G  +RNE +   +   R R F Q +   FC   +           
Sbjct: 184 QRSMRKKLPFGIGQIGKSFRNEITPG-NFTFRTREFEQMELEFFCKPGEDLEWFAFWRET 242

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRVGSDAL--WDDAENIMKGVLDTIKNSSQDRINTGVL 468
             +     G  +  ++L        G + L  + +A   +       K         GV 
Sbjct: 243 CKNWLLSLGMTEESMRLRDH-----GEEELSHYSNATTDI-----EFKFPFGWGELWGVA 292

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
                    + ++ LK              DFN       +     +E+  P  I     
Sbjct: 293 S--------RTDFDLK------RHMEHSNEDFN-------YIDPQTNERYVPYCIE-PSL 330

Query: 529 GSIERFIGIMIENFKGNLP-----------LWLSPIQAIVTTITSSAVEYAQEIANLLKS 577
           G+    +  + + ++                 L+P +A +  ++    E A E+   L +
Sbjct: 331 GADRVTLAFLCDAYEEEQLENDSRTVLRFHPALAPYKAAILPLSKKLSEGATEVFAEL-A 389

Query: 578 HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
               ++ D    +I  + R       P  I        ++++ +R   +    ++ + + 
Sbjct: 390 KDFMVDFDETG-SIGKRYRRQDEIGTPFCITYDFDSVEDKAVTVRDRDTMEQVRMPISEL 448

Query: 638 IPILTK 643
              L K
Sbjct: 449 KGFLEK 454


>gi|228910750|ref|ZP_04074559.1| Glycyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
 gi|228848701|gb|EEM93546.1| Glycyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
          Length = 487

 Score = 84.1 bits (206), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 53/366 (14%), Positives = 110/366 (30%), Gaps = 55/366 (15%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
            E+  P    +   +          N+        T        L+P    G    F + 
Sbjct: 159 HEVKCPDCGSEEFTEIRQF------NLMFKTFQGVTESSTNEIFLRPETAQGIFVNFKNV 212

Query: 352 LKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
            +S  ++LP  + + G  +RNE +   +   R R F Q +   FC   +           
Sbjct: 213 QRSMRKKLPFGIGQIGKSFRNEITPG-NFTFRTREFEQMELEFFCKPGEDLEWFAFWRET 271

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRVGSDAL--WDDAENIMKGVLDTIKNSSQDRINTGVL 468
             +     G  +  ++L        G + L  + +A   +       K         GV 
Sbjct: 272 CKNWLLSLGMTEESMRLRDH-----GEEELSHYSNATTDI-----EFKFPFGWGELWGVA 321

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
                    + ++ LK              DFN       +     +E+  P  I     
Sbjct: 322 S--------RTDFDLK------RHMEHSNEDFN-------YIDPQTNERYVPYCIE-PSL 359

Query: 529 GSIERFIGIMIENFKGNLP-----------LWLSPIQAIVTTITSSAVEYAQEIANLLKS 577
           G+    +  + + ++                 L+P +A +  ++    E A E+   L +
Sbjct: 360 GADRVTLAFLCDAYEEEQLENDSRTVLRFHPALAPYKAAILPLSKKLSEGATEVFAEL-A 418

Query: 578 HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
               ++ D    +I  + R       P  I        ++++ +R   +    ++ + + 
Sbjct: 419 KDFMVDFDETG-SIGKRYRRQDEIGTPFCITYDFDSVEDKAVTVRDRDTMEQVRMPISEL 477

Query: 638 IPILTK 643
              L K
Sbjct: 478 KGFLEK 483


>gi|325971777|ref|YP_004247968.1| glycyl-tRNA synthetase [Spirochaeta sp. Buddy]
 gi|324027015|gb|ADY13774.1| glycyl-tRNA synthetase [Spirochaeta sp. Buddy]
          Length = 443

 Score = 84.1 bits (206), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 61/419 (14%), Positives = 134/419 (31%), Gaps = 67/419 (15%)

Query: 270 RKGWKIFQTLISYMRRKIKDDYEEIN---TPQVLDQHLWQQSGHWDSYRANMFAVKCAD- 325
             G ++   +  +  +++   +++I       ++   +W+ SGH  ++   M   K    
Sbjct: 37  PLGVQLKNNIRDFWWKEMTQIHDDIVGLDASILMHPRVWEASGHVSNFSDPMVDCKQCKS 96

Query: 326 -------------------DTIKDLRTF------------------ALKPMNCPGHVAVF 348
                              D+  + R F                   L+P    G    F
Sbjct: 97  RFRADQIDLKGACPTCGTKDSFTEPRNFNLMFATHIGANADASSTIYLRPETAQGIYVDF 156

Query: 349 NHGLKSYR-ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
            + + S R ++P  +A+ G  +RNE + + + + R   F Q +   FC            
Sbjct: 157 KNVVSSSRVKIPFGIAQVGKSFRNEIT-TKNFIFRSCEFEQMEMQWFCKPGTDEKWFSYW 215

Query: 408 HNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGV 467
               ++ Y   G +   ++         G D L   A++             Q     G 
Sbjct: 216 REQRMAFYHKMGIKPQSLRWHQH-----GPDELAFYAKDAY---------DIQFLFPMGW 261

Query: 468 LLGEGAFYGPKFEY-ILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
              EG      ++    +   G++       +D     R+  + V + +     V++   
Sbjct: 262 QELEGVHSRTDYDLTQHQTFSGKEMT----YLDPESNERYIPYVVETSAGLTRNVLMALG 317

Query: 527 VFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTI--TSSAVEYAQEIANLLKSHHLSIET 584
                E   G  +     +    L+P+   V  +       E+A ++ + L+    S   
Sbjct: 318 DAYDEEELEGGDV-RTVLHFHPSLAPVTVAVLPLVKKDGIAEFASKLEHELRD-DFSTFY 375

Query: 585 DFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           D     I  + R       P  +    +   ++++ +R   S    +V++ D +  + K
Sbjct: 376 DVSGA-IGRRYRRMDEIGTPYCVTVDYQSLEDQTVTLRLRDSMEQVRVAITDLVATIKK 433


>gi|290994751|ref|XP_002679995.1| predicted protein [Naegleria gruberi]
 gi|284093614|gb|EFC47251.1| predicted protein [Naegleria gruberi]
          Length = 528

 Score = 84.1 bits (206), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 62/350 (17%), Positives = 115/350 (32%), Gaps = 48/350 (13%)

Query: 306 QQSGHWDSYRA-NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLA 363
           +++  WD  R  +M          K+  T  L+P    G    FN+ +  S + LP+ + 
Sbjct: 197 KKANSWDKIRNFDMLFKTMYGPIEKEENTAYLRPETAQGIFINFNNVITTSRKRLPLGVG 256

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           + G  +RNE S     + R R F Q +   FC   Q  +      N        +G +K 
Sbjct: 257 QIGKAFRNEISPR-DFIFRQREFEQMELEYFCHPTQSSDYFKYWVNFCHEWLLKYGLKKD 315

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            V++ T+ +     D      E      L     S    I                    
Sbjct: 316 NVRIYTKTQ-----DLAHYSKETSDIEYLFPFGWSEIWGI-------------------- 350

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM----- 538
                R        V  +   +    YV+  + + +   +     G+       +     
Sbjct: 351 ---ANRTDYDLQAHVQPSKKDKHTFEYVDPQTNEKYVPHVVEPSAGADRVLFAFLYDAYN 407

Query: 539 IENFKG-------NLPLWLSPIQAIVTTITSSAVEY---AQEIANLLKSHHLSIETDFRN 588
           +E   G        +   L+P +  V  +    VE    A+EI + L S  +S + D  +
Sbjct: 408 VEEVPGEEKRVVLKIHPDLAPYKFAVFPLQKKPVELMSKAEEIYSQLASV-VSTDYDVSS 466

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
            +I    R H     P  I    +   + ++ +R   +    ++++ D +
Sbjct: 467 -SIGVLYRRHDEIGTPYCITIDHQTLKDNTVTVRDRDTMKQIRMNINDIV 515


>gi|170760063|ref|YP_001788858.1| glycyl-tRNA synthetase [Clostridium botulinum A3 str. Loch Maree]
 gi|169407052|gb|ACA55463.1| glycine--tRNA ligase [Clostridium botulinum A3 str. Loch Maree]
          Length = 463

 Score = 84.1 bits (206), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 57/349 (16%), Positives = 117/349 (33%), Gaps = 55/349 (15%)

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEP 373
           + N+        T        L+P    G    F +  + S +++P  +A+ G  +RNE 
Sbjct: 151 KFNLMFKTFQGVTEDAKSEIYLRPETAQGIFVNFKNVQRTSRKKVPFGIAQIGKSFRNEI 210

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP 431
           +   +   R R F Q +   FC    +  +    K +     I      E I  +  ++ 
Sbjct: 211 TPG-NFTFRTREFEQMELEFFCKPGTDLEWFNYWKDYCWNFLINLGINKENIRFRDHSQE 269

Query: 432 EKRVGSD--------------ALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           E    S+               LW  A+     +   +++S +D +N  +       Y P
Sbjct: 270 ELSHYSNATSDIEFLFPFGWGELWGVADRTDFDLKKHMEHSGED-LNY-LDPTTKERYVP 327

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
              Y ++ ++G D       VD                +  + + +H             
Sbjct: 328 ---YCIEPSLGADRVVLAFLVDAYDEEEL------EGGDVRNVLHLH------------- 365

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
                       L+P +A V  ++    + +QE+ ++L     +I+ D    +I  + R 
Sbjct: 366 ----------PALAPFKAAVLPLSKKLSDKSQEVYSMLSKK-FNIDYDEAG-SIGKRYRR 413

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
                 P  I        + ++ IR   +    +VS+ + +    ++ L
Sbjct: 414 EDEIGTPYCITVDFDTLEDNTVTIRDRDTMNQIRVSINE-LEKFIEDKL 461


>gi|218900065|ref|YP_002448476.1| glycyl-tRNA synthetase [Bacillus cereus G9842]
 gi|218541497|gb|ACK93891.1| glycyl-tRNA synthetase [Bacillus cereus G9842]
          Length = 458

 Score = 83.7 bits (205), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 53/366 (14%), Positives = 110/366 (30%), Gaps = 55/366 (15%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
            E+  P    +   +          N+        T        L+P    G    F + 
Sbjct: 130 HEVKCPDCGSEEFTEIRQF------NLMFKTFQGVTESSTNEIFLRPETAQGIFVNFKNV 183

Query: 352 LKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
            +S  ++LP  + + G  +RNE +   +   R R F Q +   FC   +           
Sbjct: 184 QRSMRKKLPFGIGQIGKSFRNEITPG-NFTFRTREFEQMELEFFCKPGEDLEWFAFWRET 242

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRVGSDAL--WDDAENIMKGVLDTIKNSSQDRINTGVL 468
             +     G  +  ++L        G + L  + +A   +       K         GV 
Sbjct: 243 CKNWLLSLGMTEESMRLRDH-----GEEELSHYSNATTDI-----EFKFPFGWGELWGVA 292

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
                    + ++ LK              DFN       +     +E+  P  I     
Sbjct: 293 S--------RTDFDLK------RHMEHSNEDFN-------YIDPQTNERYVPYCIE-PSL 330

Query: 529 GSIERFIGIMIENFKGNLP-----------LWLSPIQAIVTTITSSAVEYAQEIANLLKS 577
           G+    +  + + ++                 L+P +A +  ++    E A E+   L +
Sbjct: 331 GADRVTLAFLCDAYEEEQLENDSRTVLRFHPALAPYKAAILPLSKKLSEGATEVFAEL-A 389

Query: 578 HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
               ++ D    +I  + R       P  I        ++++ +R   +    ++ + + 
Sbjct: 390 KDFMVDFDETG-SIGKRYRRQDEIGTPFCITYDFDSVEDKAVTVRDRDTMEQVRMPISEL 448

Query: 638 IPILTK 643
              L K
Sbjct: 449 KGFLEK 454


>gi|229163896|ref|ZP_04291836.1| Glycyl-tRNA synthetase [Bacillus cereus R309803]
 gi|228619517|gb|EEK76403.1| Glycyl-tRNA synthetase [Bacillus cereus R309803]
          Length = 458

 Score = 83.7 bits (205), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 53/366 (14%), Positives = 110/366 (30%), Gaps = 55/366 (15%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
            E+  P    +   +          N+        T        L+P    G    F + 
Sbjct: 130 HEVKCPDCGSEEFTEIRQF------NLMFKTFQGVTESSTNEIFLRPETAQGIFVNFKNV 183

Query: 352 LKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
            +S  ++LP  + + G  +RNE +   +   R R F Q +   FC   +           
Sbjct: 184 QRSMRKKLPFGIGQIGKSFRNEITPG-NFTFRTREFEQMELEFFCKPGEDLEWFAFWRET 242

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRVGSDAL--WDDAENIMKGVLDTIKNSSQDRINTGVL 468
             +     G  +  ++L        G + L  + +A   +       K         GV 
Sbjct: 243 CKNWLLSLGMHEESMRLRDH-----GEEELSHYSNATTDI-----EFKFPFGWGELWGVA 292

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
                    + ++ LK              DFN       +     +E+  P  I     
Sbjct: 293 S--------RTDFDLK------RHMEHSNEDFN-------YIDPQTNERYVPYCIE-PSL 330

Query: 529 GSIERFIGIMIENFKGNLP-----------LWLSPIQAIVTTITSSAVEYAQEIANLLKS 577
           G+    +  + + ++                 L+P +A +  ++    E A E+   L +
Sbjct: 331 GADRVTLAFLCDAYEEEQLENDSRTVLRFHPALAPYKAAILPLSKKLSEGATEVFAEL-A 389

Query: 578 HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
               ++ D    +I  + R       P  I        ++++ +R   +    ++ + + 
Sbjct: 390 KDFMVDFDETG-SIGKRYRRQDEIGTPFCITYDFDSVEDKAVTVRDRDTMEQVRMPISEL 448

Query: 638 IPILTK 643
              L K
Sbjct: 449 KGFLEK 454


>gi|229048607|ref|ZP_04194165.1| Glycyl-tRNA synthetase [Bacillus cereus AH676]
 gi|228722726|gb|EEL74113.1| Glycyl-tRNA synthetase [Bacillus cereus AH676]
          Length = 458

 Score = 83.7 bits (205), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 53/366 (14%), Positives = 110/366 (30%), Gaps = 55/366 (15%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
            E+  P    +   +          N+        T        L+P    G    F + 
Sbjct: 130 HEVKCPDCGSEEFTEIRQF------NLMFKTFQGVTESSTNEIFLRPETAQGIFVNFKNV 183

Query: 352 LKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
            +S  ++LP  + + G  +RNE +   +   R R F Q +   FC   +           
Sbjct: 184 QRSMRKKLPFGIGQIGKSFRNEITPG-NFTFRTREFEQMELEFFCKPGEDLEWFAFWRET 242

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRVGSDAL--WDDAENIMKGVLDTIKNSSQDRINTGVL 468
             +     G  +  ++L        G + L  + +A   +       K         GV 
Sbjct: 243 CKNWLLSLGMSEESMRLRDH-----GEEELSHYSNATTDI-----EFKFPFGWGELWGVA 292

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
                    + ++ LK              DFN       +     +E+  P  I     
Sbjct: 293 S--------RTDFDLK------RHMEHSNEDFN-------YIDPQTNERYVPYCIE-PSL 330

Query: 529 GSIERFIGIMIENFKGNLP-----------LWLSPIQAIVTTITSSAVEYAQEIANLLKS 577
           G+    +  + + ++                 L+P +A +  ++    E A E+   L +
Sbjct: 331 GADRVTLAFLCDAYEEEQLENDSRTVLRFHPALAPYKAAILPLSKKLSEGATEVFAEL-A 389

Query: 578 HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
               ++ D    +I  + R       P  I        ++++ +R   +    ++ + + 
Sbjct: 390 KDFMVDFDETG-SIGKRYRRQDEIGTPFCITYDFDSVEDKAVTVRDRDTMEQVRMPISEL 448

Query: 638 IPILTK 643
              L K
Sbjct: 449 KGFLEK 454


>gi|296140437|ref|YP_003647680.1| glycyl-tRNA synthetase [Tsukamurella paurometabola DSM 20162]
 gi|296028571|gb|ADG79341.1| glycyl-tRNA synthetase [Tsukamurella paurometabola DSM 20162]
          Length = 478

 Score = 83.7 bits (205), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 61/345 (17%), Positives = 120/345 (34%), Gaps = 28/345 (8%)

Query: 307 QSGHWDS-YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH-GLKSYRELPVRLAE 364
             G W      NM           +     L+P    G    F +    + ++ P  + +
Sbjct: 147 TKGQWTEPRDFNMMLKTYLGPIESEDGLHYLRPETAQGIFVNFKNVMTTARKKPPFGIGQ 206

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
            G  +RNE +   + + R R F Q +   F    +         +  +  Y D G +   
Sbjct: 207 IGKSFRNEITPG-NFIFRTREFEQMEMEFFVKPGEDETWHQYWIDYRLQWYTDLGIKPEN 265

Query: 425 VKLSTRPEKRV-----GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           ++L T P++++     G+  +    E       +    +++   + G         G   
Sbjct: 266 LRLFTHPQEKLSHYSKGTVDIEYRFEFAGSEFGELEGIANRTDFDLGTHSKHS---GESL 322

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           EY  +   G  +    I+    L     AF V++++E+  P    +A  G+  R +    
Sbjct: 323 EYFDQ-QSGERYIPYVIEPAAGLTRSLMAFLVDAYTEEEVP----KANGGTDTRVV---- 373

Query: 540 ENFKGNLPLWLSPIQAIVTTIT--SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
                 L   L+P++A V  ++        A+E+A  L+    ++E D     I  + R 
Sbjct: 374 ----LKLDRRLAPVKAAVLPLSRDEKLSPKARELAADLRQF-WNVEFDDAQG-IGKRYRR 427

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
                 P  I        + S+ +R   +   ++V L +    L 
Sbjct: 428 QDEIGTPFCITVDFDTLEDDSVTVRERDTMAQERVPLAEVREYLA 472


>gi|302876579|ref|YP_003845212.1| glycyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|307687254|ref|ZP_07629700.1| glycyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|302579436|gb|ADL53448.1| glycyl-tRNA synthetase [Clostridium cellulovorans 743B]
          Length = 463

 Score = 83.7 bits (205), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 51/346 (14%), Positives = 101/346 (29%), Gaps = 51/346 (14%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    F    + S +++P  + + G  +RNE +
Sbjct: 152 FNLMFKTFQGVTEDAKAEIYLRPETAQGIFVNFKSVQRTSRKKIPFGIGQIGKSFRNEIT 211

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
              + + R R F Q +   FC    +  +    K +            E +  +     E
Sbjct: 212 PG-NFIFRTREFEQMELEFFCKPGTDLEWFSYWKNYCFNFLKNLSMKEENLRFRDHGEEE 270

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
               S+A  D                    I      G G  +G       +     +  
Sbjct: 271 LSFYSNATSD--------------------IEFKFPFGWGELWG----IADRTDYDLNQH 306

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP----- 547
                 D N             +EK  P +I     G+    +  + + +          
Sbjct: 307 AKHSGQDLNYLD-------PVTNEKYVPYVIE-PSLGADRVLLAFLCDAYDEEELEDGDS 358

Query: 548 -------LWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
                    L+P +A V  ++    E + E+   L     +++ D    +I  + R    
Sbjct: 359 RTVLRLHPALAPFKAAVMPLSKKLSEKSLEVYEKLSKK-FNVDYDEAG-SIGKRYRREDE 416

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
              P  I        + S+ +R   +    ++ + + +    +E L
Sbjct: 417 IGTPYCITIDFDTLEDDSVTVRDRDTMNQVRIKIDE-LEKFIEEKL 461


>gi|189910413|ref|YP_001961968.1| glycyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167775089|gb|ABZ93390.1| Glycine--tRNA ligase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
          Length = 466

 Score = 83.7 bits (205), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 52/349 (14%), Positives = 105/349 (30%), Gaps = 59/349 (16%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPS 374
            N+        + +      L+P    G    F +    + +++P  +A+ G  +RNE  
Sbjct: 153 FNLMFKTSHGASEEGATDIYLRPETAQGIFINFKNVTQIARKKVPFGIAQIGKSFRNEI- 211

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD---FGFEKIMVKLSTRP 431
            +   + R R F Q +   FC             +  +    +      E + V+   + 
Sbjct: 212 MARQFIFRTREFEQMEMEFFCEPGTQKEWFKYWVDYCMDWLVNVVGLKKENLRVREHEKE 271

Query: 432 EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDW 491
           E    SD+  D                    I      G G  +G               
Sbjct: 272 ELSFYSDSTSD--------------------IEYKYPFGWGELWGVA------------- 298

Query: 492 QCGTIQVDFNLPSRF---NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK----- 543
                  D      F   +  Y +   +K +   +     G    F+ ++ + ++     
Sbjct: 299 --SRTDYDLTQHETFSSEDLKYHDLDQKKKYLPYVVEPALGLNRLFLAVLCDAYEEEKLE 356

Query: 544 -------GNLPLWLSPIQAIV--TTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
                        +SP++  +            A+EI   L++H   ++ D     I  +
Sbjct: 357 KDDIRTVLRFGKRVSPMKVAIFPLMKKDGLDAKAKEIYTDLRNH-WYVDYDDSGA-IGKR 414

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            R H     P  I       S+ ++ IR   S   +++++ D    L +
Sbjct: 415 YRRHDEIGTPFCITVDYDTMSDGTVTIRERDSMKQERIAVADLKSYLIQ 463


>gi|228923648|ref|ZP_04086927.1| Glycyl-tRNA synthetase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228961167|ref|ZP_04122789.1| Glycyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|229130174|ref|ZP_04259134.1| Glycyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|229193180|ref|ZP_04320132.1| Glycyl-tRNA synthetase [Bacillus cereus ATCC 10876]
 gi|228590300|gb|EEK48167.1| Glycyl-tRNA synthetase [Bacillus cereus ATCC 10876]
 gi|228653288|gb|EEL09166.1| Glycyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|228798514|gb|EEM45505.1| Glycyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228836009|gb|EEM81371.1| Glycyl-tRNA synthetase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 487

 Score = 83.7 bits (205), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 53/366 (14%), Positives = 110/366 (30%), Gaps = 55/366 (15%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
            E+  P    +   +          N+        T        L+P    G    F + 
Sbjct: 159 HEVKCPDCGSEEFTEIRQF------NLMFKTFQGVTESSTNEIFLRPETAQGIFVNFKNV 212

Query: 352 LKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
            +S  ++LP  + + G  +RNE +   +   R R F Q +   FC   +           
Sbjct: 213 QRSMRKKLPFGIGQIGKSFRNEITPG-NFTFRTREFEQMELEFFCKPGEDLEWFAFWRET 271

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRVGSDAL--WDDAENIMKGVLDTIKNSSQDRINTGVL 468
             +     G  +  ++L        G + L  + +A   +       K         GV 
Sbjct: 272 CKNWLLSLGMSEESMRLRDH-----GEEELSHYSNATTDI-----EFKFPFGWGELWGVA 321

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
                    + ++ LK              DFN       +     +E+  P  I     
Sbjct: 322 S--------RTDFDLK------RHMEHSNEDFN-------YIDPQTNERYVPYCIE-PSL 359

Query: 529 GSIERFIGIMIENFKGNLP-----------LWLSPIQAIVTTITSSAVEYAQEIANLLKS 577
           G+    +  + + ++                 L+P +A +  ++    E A E+   L +
Sbjct: 360 GADRVTLAFLCDAYEEEQLENDSRTVLRFHPALAPYKAAILPLSKKLSEGATEVFAEL-A 418

Query: 578 HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
               ++ D    +I  + R       P  I        ++++ +R   +    ++ + + 
Sbjct: 419 KDFMVDFDETG-SIGKRYRRQDEIGTPFCITYDFDSVEDKAVTVRDRDTMEQVRMPISEL 477

Query: 638 IPILTK 643
              L K
Sbjct: 478 KGFLEK 483


>gi|206969645|ref|ZP_03230599.1| glycyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|218231344|ref|YP_002369706.1| glycyl-tRNA synthetase [Bacillus cereus B4264]
 gi|228955177|ref|ZP_04117187.1| Glycyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|229072398|ref|ZP_04205601.1| Glycyl-tRNA synthetase [Bacillus cereus F65185]
 gi|229082160|ref|ZP_04214625.1| Glycyl-tRNA synthetase [Bacillus cereus Rock4-2]
 gi|229147466|ref|ZP_04275814.1| Glycyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|229153102|ref|ZP_04281282.1| Glycyl-tRNA synthetase [Bacillus cereus m1550]
 gi|229181212|ref|ZP_04308543.1| Glycyl-tRNA synthetase [Bacillus cereus 172560W]
 gi|296505357|ref|YP_003667057.1| hypothetical protein BMB171_C4529 [Bacillus thuringiensis BMB171]
 gi|206735333|gb|EDZ52501.1| glycyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|218159301|gb|ACK59293.1| glycine--tRNA ligase [Bacillus cereus B4264]
 gi|228602266|gb|EEK59756.1| Glycyl-tRNA synthetase [Bacillus cereus 172560W]
 gi|228630368|gb|EEK87017.1| Glycyl-tRNA synthetase [Bacillus cereus m1550]
 gi|228636011|gb|EEK92493.1| Glycyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|228701152|gb|EEL53673.1| Glycyl-tRNA synthetase [Bacillus cereus Rock4-2]
 gi|228710721|gb|EEL62693.1| Glycyl-tRNA synthetase [Bacillus cereus F65185]
 gi|228804518|gb|EEM51127.1| Glycyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|296326409|gb|ADH09337.1| hypothetical protein BMB171_C4529 [Bacillus thuringiensis BMB171]
          Length = 458

 Score = 83.7 bits (205), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 53/366 (14%), Positives = 110/366 (30%), Gaps = 55/366 (15%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
            E+  P    +   +          N+        T        L+P    G    F + 
Sbjct: 130 HEVKCPDCGSEEFTEIRQF------NLMFKTFQGVTESSTNEIFLRPETAQGIFVNFKNV 183

Query: 352 LKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
            +S  ++LP  + + G  +RNE +   +   R R F Q +   FC   +           
Sbjct: 184 QRSMRKKLPFGIGQIGKSFRNEITPG-NFTFRTREFEQMELEFFCKPGEDLEWFAFWRET 242

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRVGSDAL--WDDAENIMKGVLDTIKNSSQDRINTGVL 468
             +     G  +  ++L        G + L  + +A   +       K         GV 
Sbjct: 243 CKNWLLSLGMSEESMRLRDH-----GEEELSHYSNATTDI-----EFKFPFGWGELWGVA 292

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
                    + ++ LK              DFN       +     +E+  P  I     
Sbjct: 293 S--------RTDFDLK------RHMEHSNEDFN-------YIDPQTNERYVPYCIE-PSL 330

Query: 529 GSIERFIGIMIENFKGNLP-----------LWLSPIQAIVTTITSSAVEYAQEIANLLKS 577
           G+    +  + + ++                 L+P +A +  ++    E A E+   L +
Sbjct: 331 GADRVTLAFLCDAYEEEQLENDSRTVLRFHPALAPYKAAILPLSKKLSEGATEVFAEL-A 389

Query: 578 HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
               ++ D    +I  + R       P  I        ++++ +R   +    ++ + + 
Sbjct: 390 KDFMVDFDETG-SIGKRYRRQDEIGTPFCITYDFDSVEDKAVTVRDRDTMEQVRMPISEL 448

Query: 638 IPILTK 643
              L K
Sbjct: 449 KGFLEK 454


>gi|38234279|ref|NP_940046.1| glycyl-tRNA synthetase [Corynebacterium diphtheriae NCTC 13129]
 gi|38200542|emb|CAE50237.1| glycyl-tRNA synthetase [Corynebacterium diphtheriae]
          Length = 461

 Score = 83.7 bits (205), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 57/328 (17%), Positives = 112/328 (34%), Gaps = 49/328 (14%)

Query: 334 FALKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
             L+P    G    F +    +  + P  +A+ G  +RNE +   + + R R F Q +  
Sbjct: 158 HYLRPETAQGIFVNFKNVMTTARMKPPFGIAQVGKSFRNEITPG-NFIFRTREFEQMEIE 216

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
            F  +E    +  +  +   + + D G     ++    PE         +D  +  KG +
Sbjct: 217 YFVPEELADQKFNEWVDDCWNWFVDLGINPDNMRRFDVPE---------EDRAHYSKGTI 267

Query: 453 DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
           D            G L+G       + +Y L            I+      S F+     
Sbjct: 268 DMEYKFGFQGNPWGELMGVAN----RTDYDL---------GCHIKESGEDLSYFDQTT-- 312

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGN------------LPLWLSPIQAI 556
              E+  P +I    FG     +  ++    E+   N            L   L+P++  
Sbjct: 313 --GERYVPWVIE-PSFGLTRALMAFLVDAYCEDEAPNAKGGVDKRVVLKLDPRLAPVKVA 369

Query: 557 VTTIT--SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
           V  ++   +    A+E+A  L+    +++ D     I  + R       P  +       
Sbjct: 370 VLPLSKKDTLTPVAEEVAAKLRQF-WNVDYDTSGA-IGRRYRRQDEIGTPFCVTVDFDTL 427

Query: 615 SERSIGIRRFGSTTTQKVSLLDAIPILT 642
            + ++ +R   + T ++V+L D    L 
Sbjct: 428 EDNAVTVRERDTMTQERVALADLQSYLA 455


>gi|301633230|gb|ADK86784.1| proline--tRNA ligase [Mycoplasma pneumoniae FH]
          Length = 483

 Score = 83.7 bits (205), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 55/352 (15%), Positives = 113/352 (32%), Gaps = 58/352 (16%)

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
               ++  H + +   +F ++    T K      L+P +      ++     SY+ LPV 
Sbjct: 88  SEYQKEKRHVEGFNPELFLIEQIG-TKKLHDPLVLRPTSEIAFCNLWKKQSFSYQNLPVI 146

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISIYKDFGF 420
             ++  V+R E   +    +R   F   + H +F       +  +    L   I  +   
Sbjct: 147 YNQWTCVFRAEK--NTRPFLRNSEFYWQETHGLFSDGVNSESAAIAFWKLYQDIIVNQLC 204

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
               V L +  E+  G+   W                                      E
Sbjct: 205 IPAFVGLKSPNERFAGAQNTW------------------------------------TVE 228

Query: 481 YILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
            I+ D  G+  QC T   +       F   + N  +++  P        G   R +G ++
Sbjct: 229 SIMPD--GQALQCATSHDLGQTFTKPFGLTFQNQANQQAIPYSFSC---GISTRILGALL 283

Query: 540 ----ENFKGNLPLWLSPIQAIVT----TITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
               ++F   LP  ++PIQ  +        +  VE AQ++  LL+   +  +       +
Sbjct: 284 LTHSDDFGLILPWKVAPIQVKLYLFDKKGDTKTVELAQKVQTLLEQLAIRFQFIKVENQL 343

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             ++ +  +  IP  +I      + +++ I    +      S         +
Sbjct: 344 GKQLGQGEVNGIPFQLIV----DNPQTVNIFNRLTRVKTAYSFEQLASRFVE 391


>gi|291524968|emb|CBK90555.1| glycyl-tRNA synthetase, dimeric type [Eubacterium rectale DSM
           17629]
          Length = 465

 Score = 83.7 bits (205), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 51/344 (14%), Positives = 104/344 (30%), Gaps = 49/344 (14%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPS 374
            N+        T     T  L+P    G    F +  + S +++P  + + G  +RNE +
Sbjct: 151 FNLMFKTFQGVTEDAKNTVYLRPETAQGIFVNFKNVQRTSRKKIPFGIGQVGKSFRNEIT 210

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              +   R R F Q +   FC                       G ++  ++L       
Sbjct: 211 PG-NFTFRTREFEQMELEFFCEPGTDLEWFKYWRCFCRDWLISLGIKEDEMRLRDHDPAE 269

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           +                     +     I      G G  +G   +    D +GR  +  
Sbjct: 270 L------------------AFYSKGTTDIEFLFPFGWGELWGIA-DRTDYD-LGRHQEVS 309

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKG------ 544
                    + F+    +  +EK  P +I     G+    +  +     E   G      
Sbjct: 310 G-----QDLTYFD----DQKNEKYLPYVIE-PSLGADRVVLAFLCAAYDEEDIGTPEKPD 359

Query: 545 -----NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
                +    L+P++  V  ++    E A+++   L     + E D R  TI  + R   
Sbjct: 360 VRTVFHFHPALAPVKIGVLPLSKKLNESAEKVFAQLSKT-YNCEYDDRG-TIGKRYRRQD 417

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
               P  +        +  + +R   +   +++++ +      K
Sbjct: 418 EIGTPFCVTYDFDSEEDHCVTVRDRDTMEQERIAIDELDAYFAK 461


>gi|75760257|ref|ZP_00740310.1| Glycyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
 gi|228903415|ref|ZP_04067542.1| Glycyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
 gi|228968019|ref|ZP_04129027.1| Glycyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|74492252|gb|EAO55415.1| Glycyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
 gi|228791690|gb|EEM39284.1| Glycyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228856190|gb|EEN00723.1| Glycyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
          Length = 487

 Score = 83.7 bits (205), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 53/366 (14%), Positives = 110/366 (30%), Gaps = 55/366 (15%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
            E+  P    +   +          N+        T        L+P    G    F + 
Sbjct: 159 HEVKCPDCGSEEFTEIRQF------NLMFKTFQGVTESSTNEIFLRPETAQGIFVNFKNV 212

Query: 352 LKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
            +S  ++LP  + + G  +RNE +   +   R R F Q +   FC   +           
Sbjct: 213 QRSMRKKLPFGIGQIGKSFRNEITPG-NFTFRTREFEQMELEFFCKPGEDLEWFAFWRET 271

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRVGSDAL--WDDAENIMKGVLDTIKNSSQDRINTGVL 468
             +     G  +  ++L        G + L  + +A   +       K         GV 
Sbjct: 272 CKNWLLSLGMTEESMRLRDH-----GEEELSHYSNATTDI-----EFKFPFGWGELWGVA 321

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
                    + ++ LK              DFN       +     +E+  P  I     
Sbjct: 322 S--------RTDFDLK------RHMEHSNEDFN-------YIDPQTNERYVPYCIE-PSL 359

Query: 529 GSIERFIGIMIENFKGNLP-----------LWLSPIQAIVTTITSSAVEYAQEIANLLKS 577
           G+    +  + + ++                 L+P +A +  ++    E A E+   L +
Sbjct: 360 GADRVTLAFLCDAYEEEQLENDSRTVLRFHPALAPYKAAILPLSKKLSEGATEVFAEL-A 418

Query: 578 HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
               ++ D    +I  + R       P  I        ++++ +R   +    ++ + + 
Sbjct: 419 KDFMVDFDETG-SIGKRYRRQDEIGTPFCITYDFDSVEDKAVTVRDRDTMEQVRMPISEL 477

Query: 638 IPILTK 643
              L K
Sbjct: 478 KGFLEK 483


>gi|49478811|ref|YP_038935.1| glycyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|59798535|sp|Q6HBZ1|SYG_BACHK RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|49330367|gb|AAT61013.1| glycine--tRNA ligase (glycyl-tRNA synthetase, class II) [Bacillus
           thuringiensis serovar konkukian str. 97-27]
          Length = 458

 Score = 83.7 bits (205), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 51/342 (14%), Positives = 105/342 (30%), Gaps = 49/342 (14%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    F +  +S  ++LP  + + G  +RNE +
Sbjct: 148 FNLMFKTFQGVTESSTNEIFLRPETAQGIFVNFKNVQRSMRKKLPFGIGQIGKSFRNEIT 207

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              +   R R F Q +   FC   +             +     G  +  ++L       
Sbjct: 208 PG-NFTFRTREFEQMELEFFCKPGEDLEWFAFWRETCKNWLLSLGMTEESMRLRDH---- 262

Query: 435 VGSDAL--WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
            G + L  + +A   +       K         GV          + ++ LK        
Sbjct: 263 -GEEELSHYSNATTDI-----EFKFPFGWGELWGVAS--------RTDFDLK------RH 302

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP----- 547
                 DFN       +     +E+  P  I     G+    +  + + ++         
Sbjct: 303 MEHSNEDFN-------YIDPQTNERYVPYCIE-PSLGADRVTLAFLCDAYEEEQLENDSR 354

Query: 548 ------LWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
                   L+P +A +  ++    E A E+   L +    ++ D    +I  + R     
Sbjct: 355 TVLRFHPALAPYKAAILPLSKKLSEGATEVFAEL-AKDFMVDFDETG-SIGKRYRRQDEI 412

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             P  I        ++++ +R   +    ++ + +    L K
Sbjct: 413 GTPFCITYDFDSVEDKAVTVRDRDTMEQVRMPISELKGFLEK 454


>gi|289550664|ref|YP_003471568.1| Glycyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01]
 gi|289180196|gb|ADC87441.1| Glycyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01]
          Length = 463

 Score = 83.7 bits (205), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 51/343 (14%), Positives = 107/343 (31%), Gaps = 49/343 (14%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    + +  +S  ++LP  + + G  +RNE +
Sbjct: 151 FNLMFKTFQGVTEDSTNEIFLRPETAQGIFVNYKNVQRSMRKKLPFGIGQIGKSFRNEIT 210

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
              + + R R F Q +   FC   E++  +           +K F  + +     +    
Sbjct: 211 PG-NFIFRTREFEQMELEFFCKPGEEIEWQNY---------WKTFASQWLKDLNISEENM 260

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
           R+      + +           K         G+          + ++ LK         
Sbjct: 261 RLRDHDEDELSHYSNATTDIEYKFPFGWGELWGIAS--------RTDFDLK--------- 303

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG--------- 544
              Q   +    F  ++    +EK  P  I     G+    +  + + +           
Sbjct: 304 ---QHSEHSGEDFK-YHDPETNEKYIPYCIE-PSLGADRVTLAFLCDAYDQEGVEGSKDA 358

Query: 545 ----NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
               +    L+P +A V  ++      A +I   L S   +I+ D   ++I  + R    
Sbjct: 359 RTVLHFHPALAPYKAAVLPLSKKLSGEAIKIFEDLSSK-FAIDFDES-QSIGKRYRRQDE 416

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              P  I        +  + +R   S    ++ + +    LT+
Sbjct: 417 IGTPYCITFDFDSLEDNQVTVRDRDSMDQVRMPIAELEAFLTE 459


>gi|289830169|ref|ZP_06547591.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E98-3139]
          Length = 290

 Score = 83.7 bits (205), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 57/177 (32%), Gaps = 13/177 (7%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
           P  +      I R  + G I Q+         A             ++    +G  + R 
Sbjct: 113 PSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDG---RNQILTMGCYGIGVTRV 169

Query: 535 IGIMIENF----KGNLPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDF 586
           +   IE          P  ++P Q  +  +         E A+++ + L++  + +  D 
Sbjct: 170 VAAAIEQNFDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLMDD 229

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           R E       +  +  IP  I+ GD+      I  +   S     +   D +  L K
Sbjct: 230 RKERPGVMFADMELIGIPHTIVIGDRNLDNDDIEYKYRRSGEKSLIKTGDIVDYLVK 286


>gi|315658159|ref|ZP_07911031.1| glycyl-tRNA synthetase beta subunit [Staphylococcus lugdunensis
           M23590]
 gi|315496488|gb|EFU84811.1| glycyl-tRNA synthetase beta subunit [Staphylococcus lugdunensis
           M23590]
          Length = 475

 Score = 83.7 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 51/343 (14%), Positives = 107/343 (31%), Gaps = 49/343 (14%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    + +  +S  ++LP  + + G  +RNE +
Sbjct: 163 FNLMFKTFQGVTEDSTNEIFLRPETAQGIFVNYKNVQRSMRKKLPFGIGQIGKSFRNEIT 222

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
              + + R R F Q +   FC   E++  +           +K F  + +     +    
Sbjct: 223 PG-NFIFRTREFEQMELEFFCKPGEEIEWQNY---------WKTFASQWLKDLNISEENM 272

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
           R+      + +           K         G+          + ++ LK         
Sbjct: 273 RLRDHDEDELSHYSNATTDIEYKFPFGWGELWGIAS--------RTDFDLK--------- 315

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG--------- 544
              Q   +    F  ++    +EK  P  I     G+    +  + + +           
Sbjct: 316 ---QHSEHSGEDFK-YHDPETNEKYIPYCIE-PSLGADRVTLAFLCDAYDQEGVEGSKDA 370

Query: 545 ----NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
               +    L+P +A V  ++      A +I   L S   +I+ D   ++I  + R    
Sbjct: 371 RTVLHFHPALAPYKAAVLPLSKKLSGEAIKIFEDLSSK-FAIDFDES-QSIGKRYRRQDE 428

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              P  I        +  + +R   S    ++ + +    LT+
Sbjct: 429 IGTPYCITFDFDSLEDNQVTVRDRDSMDQVRMPIAELEAFLTE 471


>gi|300858940|ref|YP_003783923.1| glycyl-tRNA synthetase [Corynebacterium pseudotuberculosis FRC41]
 gi|300686394|gb|ADK29316.1| glycyl-tRNA synthetase [Corynebacterium pseudotuberculosis FRC41]
 gi|302331189|gb|ADL21383.1| Glycyl-tRNA synthetase [Corynebacterium pseudotuberculosis 1002]
          Length = 473

 Score = 83.7 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 50/329 (15%), Positives = 107/329 (32%), Gaps = 51/329 (15%)

Query: 334 FALKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
             L+P    G    F +    +  + P  +A+ G  +RNE +   + + R R F Q +  
Sbjct: 170 HYLRPETAQGIFVNFKNVMTTARMKPPFGIAQVGKSFRNEITPG-NFIFRTREFEQMEIE 228

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
            F   +Q   +  +  +     + D G     ++    PE                    
Sbjct: 229 YFVPADQADEKFREWVDACWDWFVDLGINPENMRQFDVPE-------------------- 268

Query: 453 DTIKNSSQDRINTGVLLG-EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
           +   + S+  I+     G +G  +G       +              D        +++ 
Sbjct: 269 EERAHYSKGTIDMEYKFGFQGNPWGELMGVANRTDYDLGCHIKESGEDL-------SYFD 321

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGN------------LPLWLSPIQA 555
            +  E+  P +I    FG     +  ++    E+   N            L   LSP++ 
Sbjct: 322 QATGERYVPWVIE-PSFGLTRALMAFLVDAYCEDEAPNAKGGVDKRVVLKLDPRLSPVKV 380

Query: 556 IVTTIT--SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
            V  ++   +    A+E+A  L+    +++ D     I  + R       P  +      
Sbjct: 381 AVLPLSKKDTLTPVAEEVAAKLRKF-WNVDYDTSGA-IGRRYRRQDEIGTPFCVTVDFDT 438

Query: 614 ASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             + ++ +R   + + ++V+L      L 
Sbjct: 439 LEDNAVTVRERDTMSQERVALDQLESYLA 467


>gi|57234403|ref|YP_181519.1| glycyl-tRNA synthetase [Dehalococcoides ethenogenes 195]
 gi|57224851|gb|AAW39908.1| glycyl-tRNA synthetase [Dehalococcoides ethenogenes 195]
          Length = 433

 Score = 83.7 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 64/442 (14%), Positives = 136/442 (30%), Gaps = 88/442 (19%)

Query: 251 REMDLFHIAED---GSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEIN---TPQVLDQHL 304
           R   +F  +E     +    +   G ++ + +     R +  D +++       ++   +
Sbjct: 10  RRGFIFPSSEIYGGLNSCWDYGPLGVELKRNVKEAWWRYMVRDRDDVVGLDASIIMHPRV 69

Query: 305 WQQSGHWDSYRANMFAVKCADDTIK-----------------DLRTF------------- 334
           W+ SGH   +   M   K      +                 + R F             
Sbjct: 70  WEASGHVAGFSDPMVDCKNCKMRWRPTDLAEPKCPACGGELTESRQFNLMFKTFMGPVEE 129

Query: 335 -----ALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQ 388
                 L+P    G    F + L +  ++LP  +A+ G  +RNE + + + + R R F Q
Sbjct: 130 AANIVYLRPETAQGIFVNFENVLNTTRKKLPFGIAQIGKSFRNEIT-TGNFIFRSREFEQ 188

Query: 389 DDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIM 448
            +   F           +     ++ YK+ G     ++L         SD L   A+   
Sbjct: 189 MELEYFVKPGADDACLEEWTQYRLNWYKNLGMNPENLRLRAHR-----SDELAHYAKGC- 242

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
                         +    L G               A  RD+         +  S    
Sbjct: 243 ------YDVEYNFPMGWSELEG--------------IANRRDFDLTQ----HSKYSGKAL 278

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK-----------GNLPLWLSPIQAIV 557
            Y +  +++     +     G     +  +I+ +             +L   L+P +  V
Sbjct: 279 EYFDEETKEHFIPYVIEPSAGVERSTLAFLIDAYAEEPDKDEIRTVLHLHPALAPYKIAV 338

Query: 558 TTITSSAV--EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEAS 615
             ++   +  +YA++I   L+     +  D   ++I  + R       P  +    +   
Sbjct: 339 LPLSKKEILSDYARKIYADLRKC-WMVAYDDS-QSIGRRYRRQDEIGTPYCVTVDFQSLE 396

Query: 616 ERSIGIRRFGSTTTQKVSLLDA 637
           +  + IR   S    +V + + 
Sbjct: 397 DGMVTIRDRDSMDQIRVKVSEL 418


>gi|229087427|ref|ZP_04219561.1| Glycyl-tRNA synthetase [Bacillus cereus Rock3-44]
 gi|228695849|gb|EEL48700.1| Glycyl-tRNA synthetase [Bacillus cereus Rock3-44]
          Length = 455

 Score = 83.7 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 55/366 (15%), Positives = 111/366 (30%), Gaps = 55/366 (15%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
            E+  P    Q   +          N+        T        L+P    G    F + 
Sbjct: 127 HEVKCPDCGSQEFTEIRQF------NLMFKTFQGVTESSTNEIFLRPETAQGIFVNFKNV 180

Query: 352 LKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
            +S  ++LP  + + G  +RNE +   +   R R F Q +   FC   +         N 
Sbjct: 181 QRSMRKKLPFGIGQIGKSFRNEITPG-NFTFRTREFEQMELEFFCKPGEDLEWFTFWRNT 239

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRVGSDAL--WDDAENIMKGVLDTIKNSSQDRINTGVL 468
             +     G  +  ++L        G + L  + +A   +       K         GV 
Sbjct: 240 CKNWLLALGMNEESMRLRDH-----GEEELSHYSNATTDI-----EFKFPFGWGELWGVA 289

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
                    + ++ LK              DFN       +     +E+  P  I     
Sbjct: 290 S--------RTDFDLK------RHMEHSNEDFN-------YIDPQTNERYVPYCIE-PSL 327

Query: 529 GSIERFIGIMIENFKGNLP-----------LWLSPIQAIVTTITSSAVEYAQEIANLLKS 577
           G+    +  + + ++                 L+P +A +  ++    E A E+   L +
Sbjct: 328 GADRVTLAFLCDAYEEEQLENDSRTVLRFHPALAPYKAAILPLSKKLSEGAGEVFAEL-A 386

Query: 578 HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
               ++ D    +I  + R       P  I        ++++ +R   +    ++ + + 
Sbjct: 387 KDFVVDFDETG-SIGKRYRRQDEIGTPFCITYDFDSVEDKAVTVRDRDTMEQVRMPISEL 445

Query: 638 IPILTK 643
              L K
Sbjct: 446 KGFLEK 451


>gi|302206640|gb|ADL10982.1| Glycyl-tRNA synthetase [Corynebacterium pseudotuberculosis C231]
 gi|308276883|gb|ADO26782.1| Glycyl-tRNA synthetase [Corynebacterium pseudotuberculosis I19]
          Length = 461

 Score = 83.7 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 50/329 (15%), Positives = 107/329 (32%), Gaps = 51/329 (15%)

Query: 334 FALKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
             L+P    G    F +    +  + P  +A+ G  +RNE +   + + R R F Q +  
Sbjct: 158 HYLRPETAQGIFVNFKNVMTTARMKPPFGIAQVGKSFRNEITPG-NFIFRTREFEQMEIE 216

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
            F   +Q   +  +  +     + D G     ++    PE                    
Sbjct: 217 YFVPADQADEKFREWVDACWDWFVDLGINPENMRQFDVPE-------------------- 256

Query: 453 DTIKNSSQDRINTGVLLG-EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
           +   + S+  I+     G +G  +G       +              D        +++ 
Sbjct: 257 EERAHYSKGTIDMEYKFGFQGNPWGELMGVANRTDYDLGCHIKESGEDL-------SYFD 309

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGN------------LPLWLSPIQA 555
            +  E+  P +I    FG     +  ++    E+   N            L   LSP++ 
Sbjct: 310 QATGERYVPWVIE-PSFGLTRALMAFLVDAYCEDEAPNAKGGVDKRVVLKLDPRLSPVKV 368

Query: 556 IVTTIT--SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
            V  ++   +    A+E+A  L+    +++ D     I  + R       P  +      
Sbjct: 369 AVLPLSKKDTLTPVAEEVAAKLRKF-WNVDYDTSGA-IGRRYRRQDEIGTPFCVTVDFDT 426

Query: 614 ASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             + ++ +R   + + ++V+L      L 
Sbjct: 427 LEDNAVTVRERDTMSQERVALDQLESYLA 455


>gi|322657153|gb|EFY53436.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. CASC_09SCPH15965]
 gi|322686288|gb|EFY82272.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 446600]
          Length = 290

 Score = 83.3 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 57/177 (32%), Gaps = 13/177 (7%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
           P  +      I R  + G I Q+         A             ++    +G  + R 
Sbjct: 113 PSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDG---RNQILTMGCYGIGVTRV 169

Query: 535 IGIMIENF----KGNLPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDF 586
           +   IE          P  ++P Q  +  +         E A+++ + L++  + +  D 
Sbjct: 170 VAAAIEQNFDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLMDD 229

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           R E       +  +  IP  I+ GD+      I  +   S     +   D +  L K
Sbjct: 230 RKERPGVMFADMELIGIPHTIVIGDRNLDNDDIEYKYRRSGEKSLIKTGDIVDYLVK 286


>gi|167043358|gb|ABZ08061.1| putative tRNA synthetase class II core domain (G, H, P, S and T)
           [uncultured marine crenarchaeote HF4000_ANIW141O9]
          Length = 479

 Score = 83.3 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 65/347 (18%), Positives = 122/347 (35%), Gaps = 20/347 (5%)

Query: 319 FAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR-ELPVRLAEFGSVYRNEPSGSL 377
           F +        +     L+P  C      F    K+ R +LP+ +A+ G  +RNE +   
Sbjct: 136 FNMMFQVGIGPEGEEAYLRPETCQSIFVDFPRLFKTMRGKLPLGIAQIGKSFRNEIAPR- 194

Query: 378 HGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGS 437
             L+R+R F Q +  VFC   ++ +           I      E  ++      + ++  
Sbjct: 195 QSLLRLREFYQAEIEVFCNPARLNDLDKFSEIENTKIPIQVDNEVKIMTCKEAVDSKIIP 254

Query: 438 DALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG-PKFEYILKDAIG-RDWQCGT 495
           +        I+    +      Q      +   E AFY    F++ ++   G  +     
Sbjct: 255 NKFVAYYLGILIEFYEKAGIDIQKSRFRKLEEKEKAFYAEVAFDFEVETTTGWLELVACN 314

Query: 496 IQVDFNLP----SRFNAFYVNSHSEKCHPVM------IHRAVFGSIERFIGIMIENFKGN 545
            + D++L          F V  + EK  P +      I R+++  +E  +    EN +  
Sbjct: 315 YRADYDLSGHATKSKEKFEVMDNDEKVLPHVFELSMGIDRSLYTILEHSLREDKENDRTV 374

Query: 546 LP--LWLSPIQAIVT--TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           L    +LSPI   V          E   EI   +K     +  D     I  + R     
Sbjct: 375 LSLKPYLSPIHVGVLSLVKKDGLAEKTDEIYLKIKRK-YDVFLDHSGA-IGRRYRRLDEV 432

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
             P  I    +   + ++ +R   S    ++ + +   IL+K++  P
Sbjct: 433 GAPYAITIDHQTLQDDTVTLRMRDSMEQNRIKVSELDEILSKKTAFP 479


>gi|302380750|ref|ZP_07269215.1| phosphoribulokinase/uridine kinase family protein [Finegoldia magna
           ACS-171-V-Col3]
 gi|302311693|gb|EFK93709.1| phosphoribulokinase/uridine kinase family protein [Finegoldia magna
           ACS-171-V-Col3]
          Length = 540

 Score = 83.3 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 46/215 (21%), Positives = 90/215 (41%), Gaps = 7/215 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEII 62
            IK+   +  I ++    T  D A  I        VA+  N K+ D+   V  G +IE +
Sbjct: 1   MIKI-INNNKIYDYEDK-TIYDYA--IKYGFEDSIVALK-NNKLVDIMSYVENGDTIEFV 55

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
             +   S   +  +   ++  A +  +P+ Q+ +   I D  Y +F+        +L +I
Sbjct: 56  NEKSVYSQDTLMQTGILLLLLAFKLKFPKDQLEVEYTIGDYMYLEFENNNEIHFKDLEEI 115

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
            K M ++I ++    +  +S ++A ++FE +    K  +L+S+  KE V LY+  + +  
Sbjct: 116 RKLMDDLINQNLRIERVKVSRKEAFDIFEKEGYIQKSRLLKSL-DKEEVYLYKCLDHYFG 174

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPML 217
             G     T  +K +  +    G      +N    
Sbjct: 175 IEGFVAPYTRFLKHYKLINYFPGIALSVSNNNEFT 209


>gi|303233963|ref|ZP_07320612.1| phosphoribulokinase/uridine kinase family protein [Finegoldia magna
           BVS033A4]
 gi|302494888|gb|EFL54645.1| phosphoribulokinase/uridine kinase family protein [Finegoldia magna
           BVS033A4]
          Length = 539

 Score = 83.3 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 45/215 (20%), Positives = 89/215 (41%), Gaps = 7/215 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCD-LSDPVREGSIEII 62
            IK+   +  I ++    T  D A  I        VA+  N K+ D +S      +IE +
Sbjct: 1   MIKI-INNNKIYDYEDK-TIYDYA--IKYGFEDSIVALK-NNKLVDIMSYVENGDTIEFV 55

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
             +   S   +  +   ++  A +  +P+ Q+ +   I D  Y +F+        +L +I
Sbjct: 56  NEKSVYSQDTLMQTGILLLLLAFKLKFPKDQLEVEYTIGDYMYLEFENNNEIHFKDLEEI 115

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
            K M ++I ++    +  +S ++A ++FE +    K  +L+S+  KE V LY+  + +  
Sbjct: 116 RKLMDDLINQNLRIERVKVSRKEAFDIFEKEGYIQKSRLLKSL-DKEEVYLYKCLDHYFG 174

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPML 217
             G     T  +K +  +    G      +N    
Sbjct: 175 IEGFVAPYTRFLKHYKLINYFPGIALSVSNNNEFT 209


>gi|210617161|ref|ZP_03291428.1| hypothetical protein CLONEX_03650 [Clostridium nexile DSM 1787]
 gi|210149436|gb|EEA80445.1| hypothetical protein CLONEX_03650 [Clostridium nexile DSM 1787]
          Length = 476

 Score = 83.3 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 48/335 (14%), Positives = 101/335 (30%), Gaps = 46/335 (13%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPS 374
            N+        T     T  L+P    G    F +  + S +++P  + + G  +RNE +
Sbjct: 165 FNLMFKTFQGVTEDAKNTVYLRPETAQGIFVNFKNVQRTSRKKIPFGIGQIGKSFRNEIT 224

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              +   R R F Q +   FC                +   K  G ++  +K      + 
Sbjct: 225 PG-NFTFRTREFEQMELEFFCEPGTDLEWFAYWKQFCLDWLKSLGIKEEEIKARDHSAEE 283

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           +     +  A   +   L          I       +   Y                   
Sbjct: 284 L---CFYSKATTDV-EFLFPFGWGELWGI------ADRTDYDLT---------------- 317

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI-----ENFKG----- 544
                    S+ +  Y +   ++ +   +     G+    +  +      E  +G     
Sbjct: 318 ----QHQEVSKQDMTYFDDEKKEKYIPYVIEPSLGADRMVLAFLCSAYDEEELEGGDVRT 373

Query: 545 --NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
             +    L+PI+  V  ++    E A+++   L  +  + E D R   I  + R      
Sbjct: 374 VLHFHPALAPIKIGVLPLSKKLNEGAEKVFAQLSKY-YNCEFDDRGN-IGKRYRRQDEIG 431

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
            P  I    +   + ++ +R   +   ++V + D 
Sbjct: 432 TPFCITYDFESEEDGAVTVRDRDTMEQERVKIEDL 466


>gi|124507052|ref|XP_001352123.1| prolyl-t-RNA synthase, putative [Plasmodium falciparum 3D7]
 gi|23505153|emb|CAD51934.1| prolyl-t-RNA synthase, putative [Plasmodium falciparum 3D7]
          Length = 579

 Score = 83.3 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 50/366 (13%), Positives = 121/366 (33%), Gaps = 67/366 (18%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-D 290
             +   ++ +  +    L R   +     D +G+      G+++   +I ++ + ++  +
Sbjct: 67  RIFNDNIKSNGDKTSELLQRANYIR----DVNGIYNILPLGFRVINKIIDFLNKHLEKLN 122

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL------------RTFALKP 338
              ++   +  + LW  S     Y      V     +  D               + L P
Sbjct: 123 SHAMSLSILQAKKLWNISDRSKLYSDEFLYVYKQKQSKNDKSSEESLKKKIEDDGYILSP 182

Query: 339 MNCPGHVAVFN---HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC 395
                 +++ N   +   + + LP+ + ++   +RNE       L + + F   D + F 
Sbjct: 183 TCEESSLSLINQIYNENITIKCLPLLIHQYNYKFRNEKRFE-KSLFKSKEFLMKDGYSFH 241

Query: 396 TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTI 455
           + E+  NE  + +                                       +K   + I
Sbjct: 242 SNEKCLNETYEKYKECYKNIF-----------------------------EELKLSFNII 272

Query: 456 KNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSH 514
           K   +D++N               E+ +    G+  +   I  +     ++ +  Y++  
Sbjct: 273 KKRKKDKMNALESH----------EFQVLSRDGKYKEAAHIFKLGDYYSNKLDIKYLDKK 322

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIENF----KGNLPLWLSPIQAIVTTITSSAVEYAQE 570
           +EK + +++     G   R +  +IENF       LP  ++P    +      +   A +
Sbjct: 323 NEKKN-ILMGSYGIGIY-RLLYFLIENFYDEEGIKLPQQVAPFSVYLIQTNQKSKYSATK 380

Query: 571 IANLLK 576
           I+ +L 
Sbjct: 381 ISKILN 386


>gi|229112357|ref|ZP_04241895.1| Glycyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|228671005|gb|EEL26311.1| Glycyl-tRNA synthetase [Bacillus cereus Rock1-15]
          Length = 487

 Score = 83.3 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 51/360 (14%), Positives = 108/360 (30%), Gaps = 55/360 (15%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
            E+  P    +   +          N+        T        L+P    G    F + 
Sbjct: 159 HEVKCPDCGSEEFTEIRQF------NLMFKTFQGVTESSTNEIFLRPETAQGIFVNFKNV 212

Query: 352 LKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
            +S  ++LP  + + G  +RNE +   +   R R F Q +   FC   +           
Sbjct: 213 QRSMRKKLPFGIGQIGKSFRNEITPG-NFTFRTREFEQMELEFFCKPGEDLEWFAFWRET 271

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRVGSDAL--WDDAENIMKGVLDTIKNSSQDRINTGVL 468
             +     G  +  ++L        G + L  + +A   +       K         GV 
Sbjct: 272 CKNWLLSLGMSEESMRLRDH-----GEEELSHYSNATTDI-----EFKFPFGWGELWGVA 321

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
                    + ++ LK              DFN       +     +E+  P  I     
Sbjct: 322 S--------RTDFDLK------RHMEHSNEDFN-------YIDPQTNERYVPYCIE-PSL 359

Query: 529 GSIERFIGIMIENFKGNLP-----------LWLSPIQAIVTTITSSAVEYAQEIANLLKS 577
           G+    +  + + ++                 L+P +A +  ++    E A E+   L +
Sbjct: 360 GADRVTLAFLCDAYEEEQLENDSRTVLRFHPALAPYKAAILPLSKKLSEGATEVFAEL-A 418

Query: 578 HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
               ++ D    +I  + R       P  I        ++++ +R   +    ++ + + 
Sbjct: 419 KDFMVDFDETG-SIGKRYRRQDEIGTPFCITYDFDSVEDKAVTVRDRDTMEQVRMPISEL 477


>gi|325846508|ref|ZP_08169423.1| phosphoribulokinase/uridine kinase family protein [Anaerococcus
           hydrogenalis ACS-025-V-Sch4]
 gi|325481266|gb|EGC84307.1| phosphoribulokinase/uridine kinase family protein [Anaerococcus
           hydrogenalis ACS-025-V-Sch4]
          Length = 542

 Score = 83.3 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 38/217 (17%), Positives = 88/217 (40%), Gaps = 5/217 (2%)

Query: 25  DVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAE 83
           ++ + +  +  KK V   +NGK+ DL+  +     I +I      S      S A +   
Sbjct: 19  ELVKQLYPNDYKKYVLSNVNGKIEDLNYELSANDEIYLIDKSSHISNLTYESSIALVCIL 78

Query: 84  AVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSH 143
           A++ I+  ++V +   + +  Y   D        +L++I+ +M  II  D  FL+++ + 
Sbjct: 79  AIKKIYNNIKVNVEYSVNNCLYLSID-NFKILHKDLSKIKIEMNNIIKSDISFLRKFYTK 137

Query: 144 EKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKV 203
           ++A ++F+   +  K  +L S+   E  ++Y     +          +  ++ F  +   
Sbjct: 138 DEALKIFKKSNQLDKYNLLNSVDIDE-FSVYEIFGQYFSFTNFLCPKSSWIEDFELIYYY 196

Query: 204 AG--AYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
            G    ++ + +  +L            E ++    L
Sbjct: 197 PGILINFKKNKDSKLLDFKEQVNIPKIYERSKKWTNL 233


>gi|228993636|ref|ZP_04153543.1| Glycyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
 gi|228766065|gb|EEM14712.1| Glycyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
          Length = 458

 Score = 83.3 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 52/342 (15%), Positives = 106/342 (30%), Gaps = 49/342 (14%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    F +  +S  ++LP  + + G  +RNE +
Sbjct: 148 FNLMFKTFQGVTESSTNEIFLRPETAQGIFVNFKNVQRSMRKKLPFGIGQIGKSFRNEIT 207

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              +   R R F Q +   FC   +         N   +     G  +  ++L       
Sbjct: 208 PG-NFTFRTREFEQMELEFFCKPGEDLEWFTFWRNTCKNWLLSLGMHEESMRLRDH---- 262

Query: 435 VGSDAL--WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
            G + L  + +A   +       K         GV          + ++ LK        
Sbjct: 263 -GEEELSHYSNATTDI-----EFKFPFGWGELWGVAS--------RTDFDLK------RH 302

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP----- 547
                 DFN       +     +E+  P  I     G+    +  + + ++         
Sbjct: 303 MEHSNEDFN-------YIDPQTNERYVPYCIE-PSLGADRVTLAFLCDAYEEEQLENDSR 354

Query: 548 ------LWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
                   L+P +A +  ++    E A E+   L +    ++ D    +I  + R     
Sbjct: 355 TVLRFHPALAPYKAAILPLSKKLSEGAGEVFAEL-AKDFVVDFDETG-SIGKRYRRQDEI 412

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             P  I        ++++ +R   +    ++ + +    L K
Sbjct: 413 GTPFCITYDFDSVEDKAVTVRDRDTMEQVRMPISELKGFLEK 454


>gi|229020149|ref|ZP_04176925.1| Glycyl-tRNA synthetase [Bacillus cereus AH1273]
 gi|228741158|gb|EEL91380.1| Glycyl-tRNA synthetase [Bacillus cereus AH1273]
          Length = 455

 Score = 83.3 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 53/366 (14%), Positives = 110/366 (30%), Gaps = 55/366 (15%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
            E+  P    Q   +          N+        T        L+P    G    F + 
Sbjct: 127 HEVKCPDCGSQEFTEIRQF------NLMFKTFQGVTESSTNEIFLRPETAQGIFVNFKNV 180

Query: 352 LKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
            +S  ++LP  + + G  +RNE +   +   R R F Q +   FC   +           
Sbjct: 181 QRSMRKKLPFGIGQIGKSFRNEITPG-NFTFRTREFEQMELEFFCKPGEDLEWFAFWRET 239

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRVGSDAL--WDDAENIMKGVLDTIKNSSQDRINTGVL 468
             +     G  +  ++L        G + L  + +A   +       +         GV 
Sbjct: 240 CKNWLLSLGMTEESMRLRDH-----GEEELSHYSNATTDI-----EFRFPFGWGELWGVA 289

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
                    + ++ LK              DFN       +     +E+  P  I     
Sbjct: 290 S--------RTDFDLK------RHMEHSNEDFN-------YIDPQTNERYVPYCIE-PSL 327

Query: 529 GSIERFIGIMIENFKGNLP-----------LWLSPIQAIVTTITSSAVEYAQEIANLLKS 577
           G+    +  + + ++                 L+P +A +  ++    E A E+   L +
Sbjct: 328 GADRVTLAFLCDAYEEEQLENDSRTVLRFHPALAPYKAAILPLSKKLSEGATEVFAEL-A 386

Query: 578 HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
               ++ D    +I  + R       P  I        ++++ +R   +    ++ + + 
Sbjct: 387 KDFMVDFDETG-SIGKRYRRQDEIGTPFCITYDFDSVEDKAVTVRDRDTMEQVRMPISEL 445

Query: 638 IPILTK 643
              L K
Sbjct: 446 KGFLEK 451


>gi|27981827|gb|AAM94642.1| prolyl tRNA synthetase [Spironucleus barkhanus]
          Length = 299

 Score = 83.3 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/208 (16%), Positives = 69/208 (33%), Gaps = 16/208 (7%)

Query: 450 GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNA 508
            V + +    Q  +        GA +    + ++    G+  Q   I  +       FN 
Sbjct: 7   SVFEAMGFYGQKLVRAPWDKFAGAEHTEVLDVVMPC--GKVLQTAGIHFLGQKFAKVFNI 64

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTT---IT 561
            +++ ++ +    M      G   R +   +        L L       Q ++       
Sbjct: 65  KFIDQNNTQQFAEM---TCAGISTRALACALSVHGDQKGLMLPSLIAMYQVVLVPCGKYG 121

Query: 562 SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERS-IG 620
              V   +EI   LK+  +    D   +++  KI    +K +P+ I  G ++      + 
Sbjct: 122 DDLVLKMKEIQQTLKAAGIRSFFDDSKKSMGEKIFHWEMKGVPLRIELGPRDLESGDFVA 181

Query: 621 I-RRFGSTTTQKVSLLDAIPILTKESLP 647
           I R  G    Q   + D I  + ++ L 
Sbjct: 182 ICRDTGKDGKQVFKVQD-IAAVARDQLA 208


>gi|239627750|ref|ZP_04670781.1| glycyl-tRNA synthetase [Clostridiales bacterium 1_7_47_FAA]
 gi|239517896|gb|EEQ57762.1| glycyl-tRNA synthetase [Clostridiales bacterium 1_7_47FAA]
          Length = 462

 Score = 83.3 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 51/335 (15%), Positives = 106/335 (31%), Gaps = 46/335 (13%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPS 374
            N+        T     T  L+P    G    F +  + S +++P  +A+ G  +RNE +
Sbjct: 151 FNLMFKTFQGVTEDAKNTVYLRPETAQGIFVNFKNVQRTSRKKVPFGIAQIGKSFRNEIT 210

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              +   R R F Q +   FC  +             I   K  G ++  ++     ++ 
Sbjct: 211 PG-NFTFRTREFEQMELEFFCKPDTDLEWFAYWKQYCIDWLKALGIKEDEMRARDHEQEE 269

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           +   + +  A   +   L          I                      A   D+   
Sbjct: 270 L---SFYSKATTDL-EFLFPFGWGELWGI----------------------ADRTDYDLT 303

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLP--- 547
             Q   N+  +  +++ +   EK  P +I     G+    +  +     E   G      
Sbjct: 304 QHQ---NVSGQDMSYFDDEAKEKYIPYVIE-PSLGADRVTLAFLCAAYDEEEIGEGDVRT 359

Query: 548 -----LWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
                  L+P++  V  ++    E A+++   L  +  + E D R   I  + R      
Sbjct: 360 VLHFHPALAPVKVGVLPLSKKLNEGAEKVYTELSKY-FNCEFDDRGN-IGKRYRRQDEIG 417

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
            P  I        + ++ +R   +    ++ + + 
Sbjct: 418 TPFCITYDFDSEEDHAVTVRDRDTMEQVRIPISEL 452


>gi|229175609|ref|ZP_04303118.1| Glycyl-tRNA synthetase [Bacillus cereus MM3]
 gi|228607867|gb|EEK65180.1| Glycyl-tRNA synthetase [Bacillus cereus MM3]
          Length = 458

 Score = 83.3 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 53/366 (14%), Positives = 110/366 (30%), Gaps = 55/366 (15%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
            E+  P    Q   +          N+        T        L+P    G    F + 
Sbjct: 130 HEVKCPDCGSQEFTEIRQF------NLMFKTFQGVTESSTNEIFLRPETAQGIFVNFKNV 183

Query: 352 LKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
            +S  ++LP  + + G  +RNE +   +   R R F Q +   FC   +           
Sbjct: 184 QRSMRKKLPFGIGQIGKSFRNEITPG-NFTFRTREFEQMELEFFCKPGEDLEWFAFWRET 242

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRVGSDAL--WDDAENIMKGVLDTIKNSSQDRINTGVL 468
             +     G  +  ++L        G + L  + +A   +       +         GV 
Sbjct: 243 CKNWLLSLGMTEESMRLRDH-----GEEELSHYSNATTDI-----EFRFPFGWGELWGVA 292

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
                    + ++ LK              DFN       +     +E+  P  I     
Sbjct: 293 S--------RTDFDLK------RHMEHSNEDFN-------YIDPQTNERYVPYCIE-PSL 330

Query: 529 GSIERFIGIMIENFKGNLP-----------LWLSPIQAIVTTITSSAVEYAQEIANLLKS 577
           G+    +  + + ++                 L+P +A +  ++    E A E+   L +
Sbjct: 331 GADRVTLAFLCDAYEEEQLENDSRTVLRFHPALAPYKAAILPLSKKLSEGATEVFAEL-A 389

Query: 578 HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
               ++ D    +I  + R       P  I        ++++ +R   +    ++ + + 
Sbjct: 390 KDFMVDFDETG-SIGKRYRRQDEIGTPFCITYDFDSVEDKAVTVRDRDTMEQVRMPISEL 448

Query: 638 IPILTK 643
              L K
Sbjct: 449 KGFLEK 454


>gi|253580799|ref|ZP_04858062.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251847869|gb|EES75836.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 475

 Score = 83.3 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 45/342 (13%), Positives = 99/342 (28%), Gaps = 48/342 (14%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPS 374
            N+        T     T  L+P    G    F +  + S +++P  + + G  +RNE +
Sbjct: 166 FNLMFKTFQGVTEDAKNTVYLRPETAQGIFVNFKNVQRTSRKKIPFGIGQIGKSFRNEIT 225

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              +   R R F Q +   FC  +          N  ++     G +   V+      + 
Sbjct: 226 PG-NFTFRTREFEQMELEFFCEPDTDLEWFAYWKNFCLNWLHSLGLKDEEVRYRDHDAEE 284

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           +   + +  A   +   L          I       +   Y                   
Sbjct: 285 L---SFYSKATTDV-EFLFPFGWGELWGI------ADRTDYDLT---------------- 318

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP------- 547
                    S  +  Y +   ++ +   +     G+    +  +   +   +        
Sbjct: 319 ----QHQNVSGQDLTYFDDEKKQKYIPYVIEPSLGADRVVLAFLCSAYDEEVLDAEKNDV 374

Query: 548 -------LWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
                    L+P++  V  ++    E A++I   L     + E D R   I  + R    
Sbjct: 375 RTVLHFHPALAPVKIGVLPLSKKLNEGAEKIYQQLSKK-YNCEYDDRGN-IGKRYRRQDE 432

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
              P  +    +  ++ ++ IR   +    +V + +      
Sbjct: 433 IGTPFCVTYDFESENDGAVTIRDRDTMEQVRVKIDELDAYFC 474


>gi|212696242|ref|ZP_03304370.1| hypothetical protein ANHYDRO_00778 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212676871|gb|EEB36478.1| hypothetical protein ANHYDRO_00778 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 542

 Score = 83.3 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 38/217 (17%), Positives = 88/217 (40%), Gaps = 5/217 (2%)

Query: 25  DVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAE 83
           ++ + +  +  KK V   +NGK+ DL+  +     I +I      S      S A +   
Sbjct: 19  ELVKQLYPNDYKKYVLSNVNGKIEDLNYELSANDEIYLIDKSSHISNLTYESSIALVCIL 78

Query: 84  AVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSH 143
           A++ I+  ++V +   + +  Y   D        +L++I+ +M  II  D  FL+++ + 
Sbjct: 79  AIKKIYNNIKVNVEYSVNNCLYLSID-NFKILHKDLSKIKIEMNNIIKSDISFLRKFYTK 137

Query: 144 EKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKV 203
           ++A ++F+   +  K  +L S+   E  ++Y     +          +  ++ F  +   
Sbjct: 138 DEALKIFKKSNQLDKYNLLNSVDIDE-FSVYEIFGQYFSFTNFLCPKSSWIEDFELIYYY 196

Query: 204 AG--AYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
            G    ++ + +  +L            E ++    L
Sbjct: 197 PGILINFKKNKDSKLLDFKEQVNIPKIYERSKKWTNL 233


>gi|55958995|emb|CAI15487.1| threonyl-tRNA synthetase 2, mitochondrial (putative) [Homo sapiens]
          Length = 178

 Score = 83.3 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 2/73 (2%)

Query: 2   PSDIKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           P  IK++ P G  I     + T   +A  IS +LA  AVA  +NG+  DL  P+  +  +
Sbjct: 58  PRTIKISLPGGQKIDAVAWNTTPYQLARQISSTLADTAVAAQVNGEPYDLERPLETDSDL 117

Query: 60  EIITPEDPRSLAV 72
             +T + P   AV
Sbjct: 118 RFLTFDSPEGKAV 130


>gi|213645917|ref|ZP_03375970.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. J185]
          Length = 249

 Score = 83.3 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 57/177 (32%), Gaps = 13/177 (7%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
           P  +      I R  + G I Q+         A             ++    +G  + R 
Sbjct: 72  PSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDG---RNQILTMGCYGIGVTRV 128

Query: 535 IGIMIENF----KGNLPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDF 586
           +   IE          P  ++P Q  +  +         E A+++ + L++  + +  D 
Sbjct: 129 VAAAIEQNFDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLMDD 188

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           R E       +  +  IP  I+ GD+      I  +   S     +   D +  L K
Sbjct: 189 RKERPGVMFADMELIGIPHTIVIGDRNLDNDDIEYKYRRSGEKSLIKTGDIVDYLVK 245


>gi|34763883|ref|ZP_00144787.1| Prolyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
 gi|27886346|gb|EAA23617.1| Prolyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
          Length = 411

 Score = 82.9 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/162 (17%), Positives = 63/162 (38%), Gaps = 9/162 (5%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP 547
           R  +CG I  +        NA Y++ + +  + +++     G        + +N   N  
Sbjct: 247 RGIECGQIFKLGDKYSKAMNATYLDENGKTQY-MLMGCYGIGVTRTMAAAIEQNNDENGI 305

Query: 548 LWL---SPIQAIVTT---ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W    +P    V          V  A++I N L+   +    D R+E   +K ++  + 
Sbjct: 306 IWPVSIAPYTVDVIPANIKNEVQVSLAEKIYNELEEEKIDAMLDDRDEKPGFKFKDADLI 365

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             P  I+ G + A E  + ++   +  T ++   + I  + +
Sbjct: 366 GFPFKIVVGKR-ADEGIVELKIRRTGETLELPQNEIIAKIKE 406


>gi|149183345|ref|ZP_01861783.1| glycyl-tRNA synthetase [Bacillus sp. SG-1]
 gi|148848942|gb|EDL63154.1| glycyl-tRNA synthetase [Bacillus sp. SG-1]
          Length = 455

 Score = 82.9 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 45/334 (13%), Positives = 99/334 (29%), Gaps = 28/334 (8%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    F +  +S  +++P  + + G  +RNE +
Sbjct: 145 FNLMFKTHQGVTESSTNEIFLRPETAQGIFVNFKNVQRSMRKKVPFGIGQIGKSFRNEIT 204

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
              +   R R F Q +   FC   E +            +     G ++  ++L      
Sbjct: 205 PG-NFTFRTREFEQMELEFFCKPGEDLEWHSY-WREFCKNWLLTLGMKEDNMRLRDH--- 259

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
               D L             +  +++   I      G G  +G             +   
Sbjct: 260 --DDDEL-------------SHYSNATTDIEYKFPFGWGELWGISDRTDFDLKRHMEHSN 304

Query: 494 GTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
                 D     +F  + +          +    +  + E       +         L+P
Sbjct: 305 EDFHYMDPQTNEKFVPYCI--EPSLGADRVTLAYLCDAYEEEELENEKRTVLRFHPALAP 362

Query: 553 IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
            +A V  ++    + A ++   L S  L ++ D    +I  + R       P  I     
Sbjct: 363 FKAAVLPLSKKLSDEAFKVYEEL-SKDLMVDFDETA-SIGKRYRRQDEIGTPFCITFDFD 420

Query: 613 EASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
              +  + +R   +    ++ + + +    +E +
Sbjct: 421 SVEDGQVTVRDRDTMDQVRMPISE-VKNFLEEKI 453


>gi|196249826|ref|ZP_03148522.1| glycyl-tRNA synthetase [Geobacillus sp. G11MC16]
 gi|196210702|gb|EDY05465.1| glycyl-tRNA synthetase [Geobacillus sp. G11MC16]
          Length = 460

 Score = 82.9 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 54/341 (15%), Positives = 103/341 (30%), Gaps = 46/341 (13%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    F +  ++  ++LP  +A+ G  +RNE +
Sbjct: 149 FNLMFKTYQGVTESSANEIYLRPETAQGIFVNFKNVQRTMRKKLPFGIAQIGKSFRNEIT 208

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              +   R R F Q +   FC   +                   G  +  ++L       
Sbjct: 209 PG-NFTFRTREFEQMELEFFCKPGEELKWFDYWKQFCKEWLLSLGMNEEHIRLRDHT--- 264

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
                         K  L    N++ D I      G G  +G       +          
Sbjct: 265 --------------KEELSHYSNATTD-IEYQFPFGWGELWG----IASRTDYDLKQHME 305

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK----------- 543
               DF+             +E+  P  I     G+    +  MI+ +            
Sbjct: 306 HSGEDFHYLD-------QETNERYIPYCIE-PSLGADRVTLAFMIDAYDEEELEDGTTRT 357

Query: 544 -GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
             +L   L+P +A V  ++    + A+ I   L + H  ++ D    +I  + R      
Sbjct: 358 VMHLHPALAPYKAAVLPLSKKLGDGARRIYEEL-AKHFMVDYDETG-SIGKRYRRQDEIG 415

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            P  I    +   +  + +R   +    ++ + +    L K
Sbjct: 416 TPFCITYDFESEQDGQVTVRDRDTMEQVRLPIGELKAFLDK 456


>gi|313906170|ref|ZP_07839518.1| glycyl-tRNA synthetase [Eubacterium cellulosolvens 6]
 gi|313469009|gb|EFR64363.1| glycyl-tRNA synthetase [Eubacterium cellulosolvens 6]
          Length = 465

 Score = 82.9 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 54/337 (16%), Positives = 107/337 (31%), Gaps = 48/337 (14%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPS 374
            N+        T     T  L+P    G    F +  + S +++P  +A+ G  +RNE +
Sbjct: 152 FNLMFKTFQGVTEDAKNTVYLRPETAQGIFVNFKNVQRTSRKKVPFGIAQIGKSFRNEIT 211

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              +   R R F Q +   FC                 +     G +   ++L     + 
Sbjct: 212 PG-NFTFRTREFEQMELEFFCEPGTDLEWFQYWRTFCHNWLTSLGLKDEELRLRDHAPEE 270

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           +   A +  A                     GV            +    D +GR  +  
Sbjct: 271 L---AFYSKATTDF-----EFLFPFGWGELWGVA-----------DRTDYD-LGRHQEVS 310

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK----------- 543
                     +   ++ +S +EK  P +I     G+    +  +   +            
Sbjct: 311 G---------QDMTYFDDSKNEKYIPYVIE-PSLGADRVVLAFLCAAYDEEVLDAEKNDV 360

Query: 544 ---GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
               +    L+P++A V  ++    E A+++ ++L S   + E D R   I  + R    
Sbjct: 361 RTVMHFHPALAPVKAAVLPLSKKLGESAEKVFDMLSSK-FNCEYDDRGA-IGKRYRRQDE 418

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
              P  I        + ++ IR   +   ++V + D 
Sbjct: 419 IGTPFCITYDFDSEEDHAVTIRNRDTMEQERVKIEDL 455


>gi|145608824|ref|XP_369830.2| hypothetical protein MGG_06345 [Magnaporthe oryzae 70-15]
 gi|145016254|gb|EDK00744.1| hypothetical protein MGG_06345 [Magnaporthe oryzae 70-15]
          Length = 617

 Score = 82.9 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 74/202 (36%), Gaps = 33/202 (16%)

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
           +  H KL R   L    +  +G+      G+++   ++  + + ++      +    +  
Sbjct: 40  EDAHEKLVRAGYLR---QANAGIFHLMPLGYRVQDKIMKLIEKHMQSIGASRLALATLSS 96

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
             +W +SG ++                        K M       +  H L SY++LP R
Sbjct: 97  PGIWAKSGRFE------------------------KAMTEEEITTLVKHTLSSYKQLPAR 132

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD-FGF 420
           L +    +R+E      GL+R R F   D + F   +   N  L+ +  + + Y   F  
Sbjct: 133 LYQITPKFRDEMRPR-KGLLRGREFMMKDLYTF---DLSVNTALQTYEQVRAAYDRIFSE 188

Query: 421 EKIMVKLSTRPEKRVGSDALWD 442
            ++ V ++      +G D   +
Sbjct: 189 LRLPVMVAEASSGDIGGDLSHE 210



 Score = 55.6 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 23/137 (16%), Positives = 57/137 (41%), Gaps = 16/137 (11%)

Query: 515 SEKCHPVMIHRAVFGS-IERFIGIMIENFKG----NLPLWLSPIQAIVTTITSSAVEYAQ 569
           S++   V +     G  + R I  + E+F      N P  ++P +  +   T +++  A+
Sbjct: 472 SKRQGEVNVQMGCHGIGVSRIIAAVAEHFGDSRGLNWPRAIAPYEVAII--TKNSLGDAE 529

Query: 570 EIANLLKSHHLSIE---------TDFRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
            I +LL                  D R++T+ +K+++  +   P++++ G      +   
Sbjct: 530 SIYDLLSEGGAIATPAFPKPDLVLDDRDKTLPWKLKDADLVGYPVVVVLGKAWVESKQCE 589

Query: 621 IRRFGSTTTQKVSLLDA 637
           ++    +  + V+L + 
Sbjct: 590 VQCRQLSFKELVALDNL 606


>gi|147669357|ref|YP_001214175.1| glycyl-tRNA synthetase [Dehalococcoides sp. BAV1]
 gi|146270305|gb|ABQ17297.1| glycyl-tRNA synthetase [Dehalococcoides sp. BAV1]
          Length = 443

 Score = 82.9 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 63/442 (14%), Positives = 137/442 (30%), Gaps = 88/442 (19%)

Query: 251 REMDLFHIAED---GSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEIN---TPQVLDQHL 304
           R   +F  +E     +    +   G ++ + +     R +  D +++       ++   +
Sbjct: 20  RRGFIFPSSEIYGGLNSCWDYGPLGVELKRNVKEAWWRYMVRDRDDVVGLDASIIMHPRV 79

Query: 305 WQQSGHWDSYRANMFAVKCADDTIK-----------------DLRTF------------- 334
           W+ SGH   +   M   K      +                 + R F             
Sbjct: 80  WEASGHVAGFSDPMVDCKKCKMRWRPTDLAEPKCPACGGELTESRQFNLMFKTFMGPIEE 139

Query: 335 -----ALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQ 388
                 L+P    G    F + L +  ++LP  +A+ G  +RNE + + + + R R F Q
Sbjct: 140 AASIVYLRPETAQGIFVNFENVLNTTRKKLPFGIAQIGKSFRNEIT-TGNFIFRSREFEQ 198

Query: 389 DDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIM 448
            +   F       +   +     ++ YK+ G     ++L         SD L   A+   
Sbjct: 199 MELEYFVKPGADDSCLEEWTQYRLNWYKNLGMNPENLRLRAHR-----SDELAHYAKGC- 252

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
                         +    L G               A  RD+            S  + 
Sbjct: 253 ------YDVEYNFPMGWSELEG--------------IANRRDFDLTQ----HAKYSGKSL 288

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK-----------GNLPLWLSPIQAIV 557
            Y +  +++     +     G     +  +I+ +             +L   L+P +  V
Sbjct: 289 EYFDEETKEHFVPYVIEPSAGVERSTLAFLIDAYAEEPDKDEIRTVLHLHPALAPYKIAV 348

Query: 558 TTITSSAV--EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEAS 615
             ++   +  +YA++I   L+     +  D   ++I  + R       P  +    +   
Sbjct: 349 LPLSKKEILSDYARKIYADLRKC-WMVAYDDS-QSIGRRYRRQDEIGTPYCVTVDFQSLE 406

Query: 616 ERSIGIRRFGSTTTQKVSLLDA 637
           +  + +R   S    +V + + 
Sbjct: 407 DGMVTVRDRDSMAQIRVKVSEL 428


>gi|291529102|emb|CBK94688.1| glycyl-tRNA synthetase, dimeric type [Eubacterium rectale M104/1]
          Length = 465

 Score = 82.9 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 50/334 (14%), Positives = 103/334 (30%), Gaps = 29/334 (8%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPS 374
            N+        T     T  L+P    G    F +  + S +++P  + + G  +RNE +
Sbjct: 151 FNLMFKTFQGVTEDAKNTVYLRPETAQGIFVNFKNVQRTSRKKIPFGIGQVGKSFRNEIT 210

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              +   R R F Q +   FC                       G ++  ++L       
Sbjct: 211 PG-NFTFRTREFEQMELEFFCEPGTDLEWFKYWRGFCRDWLISLGIKEDEMRLRDHDPAE 269

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           +                     +     I      G G  +G   +    D +GR  +  
Sbjct: 270 L------------------AFYSKGTTDIEFLFPFGWGELWGIA-DRTDYD-LGRHQEVS 309

Query: 495 TIQVDFNLPSRFNAF--YVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG---NLPLW 549
              + +    + + +  YV   S     V++        E  IG   +       +    
Sbjct: 310 GQDLTYFDDQKNDKYLPYVIEPSLGADRVVLAFLCAAYDEEDIGTPEKPDVRTVFHFHPA 369

Query: 550 LSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIIC 609
           L+P++  V  ++    E A+++   L     + E D R  TI  + R       P  +  
Sbjct: 370 LAPVKIGVLPLSKKLNESAEKVFAQLSKT-YNCEYDDRG-TIGKRYRRQDEIGTPFCVTY 427

Query: 610 GDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
                 +  + +R   +   +++++ +      K
Sbjct: 428 DFDSEEDHCVTVRDRDTMEQERIAIDELDAYFAK 461


>gi|229076294|ref|ZP_04209259.1| Glycyl-tRNA synthetase [Bacillus cereus Rock4-18]
 gi|229099375|ref|ZP_04230305.1| Glycyl-tRNA synthetase [Bacillus cereus Rock3-29]
 gi|229105535|ref|ZP_04236169.1| Glycyl-tRNA synthetase [Bacillus cereus Rock3-28]
 gi|229118387|ref|ZP_04247741.1| Glycyl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|228664957|gb|EEL20445.1| Glycyl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|228677805|gb|EEL32048.1| Glycyl-tRNA synthetase [Bacillus cereus Rock3-28]
 gi|228683999|gb|EEL37947.1| Glycyl-tRNA synthetase [Bacillus cereus Rock3-29]
 gi|228706729|gb|EEL58937.1| Glycyl-tRNA synthetase [Bacillus cereus Rock4-18]
          Length = 495

 Score = 82.9 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 53/366 (14%), Positives = 110/366 (30%), Gaps = 55/366 (15%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
            E+  P    +   +          N+        T        L+P    G    F + 
Sbjct: 167 HEVKCPDCGSEEFTEIRQF------NLMFKTFQGVTESSTNEIFLRPETAQGIFVNFKNV 220

Query: 352 LKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
            +S  ++LP  + + G  +RNE +   +   R R F Q +   FC   +           
Sbjct: 221 QRSMRKKLPFGIGQIGKSFRNEITPG-NFTFRTREFEQMELEFFCKPGEDLEWFAFWRET 279

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRVGSDAL--WDDAENIMKGVLDTIKNSSQDRINTGVL 468
             +     G  +  ++L        G + L  + +A   +       K         GV 
Sbjct: 280 CKNWLLSLGMHEESMRLRDH-----GEEELSHYSNATTDI-----EFKFPFGWGELWGVA 329

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
                    + ++ LK              DFN       +     +E+  P  I     
Sbjct: 330 S--------RTDFDLK------RHMEHSNEDFN-------YIDPQTNERYVPYCIE-PSL 367

Query: 529 GSIERFIGIMIENFKGNLP-----------LWLSPIQAIVTTITSSAVEYAQEIANLLKS 577
           G+    +  + + ++                 L+P +A +  ++    E A E+   L +
Sbjct: 368 GADRVTLAFLCDAYEEEQLENDSRTVLRFHPALAPYKAAILPLSKKLSEGATEVFAEL-A 426

Query: 578 HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
               ++ D    +I  + R       P  I        ++++ +R   +    ++ + + 
Sbjct: 427 KDFMVDFDETG-SIGKRYRRQDEIGTPFCITYDFDSVEDKAVTVRDRDTMEQVRMPISEL 485

Query: 638 IPILTK 643
              L K
Sbjct: 486 KGFLEK 491


>gi|153006690|ref|YP_001381015.1| cyclic nucleotide-binding protein [Anaeromyxobacter sp. Fw109-5]
 gi|152030263|gb|ABS28031.1| cyclic nucleotide-binding protein [Anaeromyxobacter sp. Fw109-5]
          Length = 713

 Score = 82.9 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 45/238 (18%), Positives = 83/238 (34%), Gaps = 4/238 (1%)

Query: 22  TGSDVAESISRSLAKK-AVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIRHSCAH 79
           TG+ +A+ +   +     VA  +  K   L+ PV  + ++  +T       A+  HS   
Sbjct: 176 TGTRLADLLPAEVDGALVVAGLLGQKPVSLATPVFTDSTVAPLTLRHWEGRAIYAHSVGL 235

Query: 80  IMAEAVQSIWPEVQVAIGPIIEDGFYYDFDK-EQPFSSDELAQIEKKMQEIIARDSPFLK 138
           ++ EA  ++ P + V +G         +     +       A+I  +M+ +   D+P   
Sbjct: 236 LLLEAAHTLAPSLHVRMGASRGKRQIVELAGVPRAELPGWAARIAARMERLAQDDAPIRL 295

Query: 139 QYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFF 198
           +Y   ++A   F  +       +L  +  +  V L   GE + L  GP + STG ++ F 
Sbjct: 296 EYWPTDEAAAYFSERGWDDAARLL-RVRRQATVRLVSCGELYALSMGPLLPSTGALRGFR 354

Query: 199 KLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLF 256
                 G         P   R  G       +           E      +    DL 
Sbjct: 355 LEPCEEGLALDLGERDPRNGRRGGHVAPPPADGGMVAEHQRWLEAFGVTSVGAFNDLC 412


>gi|167747961|ref|ZP_02420088.1| hypothetical protein ANACAC_02693 [Anaerostipes caccae DSM 14662]
 gi|167652611|gb|EDR96740.1| hypothetical protein ANACAC_02693 [Anaerostipes caccae DSM 14662]
          Length = 463

 Score = 82.9 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 47/329 (14%), Positives = 103/329 (31%), Gaps = 22/329 (6%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPS 374
            N+        T     T  L+P    G    F +  + S +++P  + + G  +RNE +
Sbjct: 152 FNLMFKTFQGVTEDAKNTVYLRPETAQGIFVNFKNVQRTSRKKIPFGIGQVGKSFRNEIT 211

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              +   R R F Q +   FC  +          +  I+  K  G     +++    ++ 
Sbjct: 212 PG-NFTFRTREFEQMELEFFCEPDTDLEWFAYWKDFCINWLKTLGITDDQMRVRDHGKEE 270

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           +   + +  A + +   L          I       +   Y        ++  G D    
Sbjct: 271 L---SFYSKATSDI-EFLFPFGWGELWGI------ADRTDYDLT---QHQNTSGEDLT-- 315

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQ 554
               D     R+  + +         V +        E  +    +         ++P++
Sbjct: 316 --YFDDEKKERYIPYVIEPSLGADR-VTLAFLCAAYDEEELEGGDKRTVLRFHPAIAPVK 372

Query: 555 AIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
             V  ++    E A ++   L + + + E D R   I  + R       P  +       
Sbjct: 373 IGVLPLSKKLAEGAGKVYETL-AKYYNCEYDERGN-IGKRYRRQDEIGTPFCVTYDFDSE 430

Query: 615 SERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            + ++ +R   +   ++V + D      K
Sbjct: 431 EDGAVTVRDRDTMEQERVKIEDLKEYFEK 459


>gi|289432623|ref|YP_003462496.1| glycyl-tRNA synthetase [Dehalococcoides sp. GT]
 gi|288946343|gb|ADC74040.1| glycyl-tRNA synthetase [Dehalococcoides sp. GT]
          Length = 443

 Score = 82.9 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 63/442 (14%), Positives = 136/442 (30%), Gaps = 88/442 (19%)

Query: 251 REMDLFHIAED---GSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEIN---TPQVLDQHL 304
           R   +F  +E     +    +   G ++ + +     R +  D +++       ++   +
Sbjct: 20  RRGFIFPSSEIYGGLNSCWDYGPLGVELKRNVKEAWWRYMVRDRDDVVGLDASIIMHPRV 79

Query: 305 WQQSGHWDSYRANMFAVKCADDTIK-----------------DLRTF------------- 334
           W+ SGH   +   M   K      +                 + R F             
Sbjct: 80  WEASGHVAGFSDPMVDCKKCKMRWRPTDLAEPKCPACGGELTESRQFNLMFKTFMGPVEE 139

Query: 335 -----ALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQ 388
                 L+P    G    F + L +  ++LP  +A+ G  +RNE + + + + R R F Q
Sbjct: 140 AASIVYLRPETAQGIFVNFENVLNTTRKKLPFGIAQIGKSFRNEIT-TGNFIFRSREFEQ 198

Query: 389 DDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIM 448
            +   F           +     ++ YK+ G     ++L         SD L   A+   
Sbjct: 199 MELEYFVKPGADDACLEEWTQYRLNWYKNLGMNPENLRLRAHR-----SDELAHYAKGC- 252

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
                         +    L G               A  RD+            S  + 
Sbjct: 253 ------YDVEYNFPMGWSELEG--------------IANRRDFDLTQ----HAKYSGKSL 288

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK-----------GNLPLWLSPIQAIV 557
            Y +  +++     +     G     +  +I+ +             +L   L+P +  V
Sbjct: 289 EYFDEETKEHFVPYVIEPSAGVERSTLAFLIDAYAEEPDKDEIRTVLHLHPALAPYKIAV 348

Query: 558 TTITSSAV--EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEAS 615
             ++   +  +YA++I   L+     +  D   ++I  + R       P  +    +   
Sbjct: 349 LPLSKKEILSDYARKIYADLRKC-WMVAYDDS-QSIGRRYRRQDEIGTPYCVTVDFQSLE 406

Query: 616 ERSIGIRRFGSTTTQKVSLLDA 637
           +  + +R   S    +V + + 
Sbjct: 407 DGMVTVRDRDSMAQIRVKVSEL 428


>gi|253756218|ref|YP_003029358.1| seryl-tRNA synthetase [Streptococcus suis BM407]
 gi|251818682|emb|CAZ56517.1| seryl-tRNA synthetase [Streptococcus suis BM407]
          Length = 424

 Score = 82.9 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 41/222 (18%), Positives = 89/222 (40%), Gaps = 20/222 (9%)

Query: 242 EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINT 296
           E + H  L  ++D+          G+  +F+   G ++ + L ++M    I + Y+EI T
Sbjct: 136 EPKAHWDLGEDLDILDWERGAKVTGARFLFYKNLGARLERALYNFMLDEHIAEGYQEIIT 195

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +++      +G +  ++ + F +   +        F L P         + + +   +
Sbjct: 196 PYMVNHDSMFGTGQYPKFKEDTFELADTN--------FVLIPTAEVPLTNYYRNEILEEK 247

Query: 357 ELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           +LP+        +R+E   +     GL+R+  F + +   F T EQ ++E  K+     +
Sbjct: 248 DLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFATPEQSYDELEKMTANAEN 307

Query: 414 IYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
           I +  G    ++ L T              +W  A+N  + +
Sbjct: 308 ILQKLGLPYRVLALCTGDMGYSAAKTYDLEVWIPAQNAYREI 349


>gi|240144896|ref|ZP_04743497.1| proline--tRNA ligase [Roseburia intestinalis L1-82]
 gi|257203029|gb|EEV01314.1| proline--tRNA ligase [Roseburia intestinalis L1-82]
          Length = 330

 Score = 82.9 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 33/216 (15%), Positives = 69/216 (31%), Gaps = 19/216 (8%)

Query: 436 GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGT 495
             D       ++ + V D   +        G+    G              I R  + G 
Sbjct: 124 NEDEYHYKGLDMQRDVPDAEYHDFAKAYEGGICPKCG---------KKTIRISRGIEVGN 174

Query: 496 I-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNLPLWL--- 550
           I Q+           YV+ + E   P+M    +   + R    + E +     P+W    
Sbjct: 175 IFQLGDKYTKAMKMTYVDQNGESKTPIMGCYGI--GVGRLAAAVCEAHHDEYGPIWPKSI 232

Query: 551 SPIQA---IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIII 607
           +P Q     V        ++A ++   L+   + +  D R  +      +  +  IP+ +
Sbjct: 233 APWQVHLCAVRADNEEVRKFADDLYEKLQEMGIEVIYDDRTVSAGVMFSDADLLGIPLRV 292

Query: 608 ICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           I   +   +  + +     T   +V + +A   + K
Sbjct: 293 IVSPRNMKQGVVEVASRDKTLQTQVKMEEAAEQVKK 328


>gi|163816527|ref|ZP_02207891.1| hypothetical protein COPEUT_02717 [Coprococcus eutactus ATCC 27759]
 gi|158448227|gb|EDP25222.1| hypothetical protein COPEUT_02717 [Coprococcus eutactus ATCC 27759]
          Length = 471

 Score = 82.9 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 52/345 (15%), Positives = 110/345 (31%), Gaps = 51/345 (14%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPS 374
            N+        T     T  L+P    G    F +  + S +++P  + + G  +RNE +
Sbjct: 157 FNLMFKTFQGVTEDAKNTVYLRPETAQGIFVNFKNVQRTSRKKVPFGIGQIGKSFRNEIT 216

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              +   R R F Q +   FC             +  I+  KD G +   ++      + 
Sbjct: 217 PG-NFTFRTREFEQMELEFFCKPGTDMEWFEYWRSFCINWLKDLGIKDDEMRARDHSHEE 275

Query: 435 ----------------VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
                            G   LW  A+      L   +N+S + +       +  +    
Sbjct: 276 LCFYSKGTTDIEYLFPFGWGELWGIADRTDYD-LTQHQNTSGESMEYFDDETKEKY---- 330

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
             Y+++ ++G D           L + ++   + +  +     ++H              
Sbjct: 331 IPYVIEPSLGADRVTLAF-----LCAAYDEENIGTEEKPDIRTVLH-------------- 371

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
                      L+P++  V  ++    E A++I   L  +  + E D R   I  + R  
Sbjct: 372 -------FHPQLAPVKIGVLPLSKKLNEGAEKIYAELSKY-YNCEFDDRGN-IGKRYRRQ 422

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
                P  +        + ++ +R   +   ++V + D      K
Sbjct: 423 DEIGTPFCVTYDFDSVEDGAVTVRDRDTMEQERVKIEDLKAYFEK 467


>gi|229026377|ref|ZP_04182734.1| Glycyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228734840|gb|EEL85478.1| Glycyl-tRNA synthetase [Bacillus cereus AH1272]
          Length = 487

 Score = 82.9 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 53/366 (14%), Positives = 110/366 (30%), Gaps = 55/366 (15%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
            E+  P    Q   +          N+        T        L+P    G    F + 
Sbjct: 159 HEVKCPDCGSQEFTEIRQF------NLMFKTFQGVTESSTNEIFLRPETAQGIFVNFKNV 212

Query: 352 LKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
            +S  ++LP  + + G  +RNE +   +   R R F Q +   FC   +           
Sbjct: 213 QRSMRKKLPFGIGQIGKSFRNEITPG-NFTFRTREFEQMELEFFCKPGEDLEWFAFWRET 271

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRVGSDAL--WDDAENIMKGVLDTIKNSSQDRINTGVL 468
             +     G  +  ++L        G + L  + +A   +       +         GV 
Sbjct: 272 CKNWLLSLGMTEESMRLRDH-----GEEELSHYSNATTDI-----EFRFPFGWGELWGVA 321

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
                    + ++ LK              DFN       +     +E+  P  I     
Sbjct: 322 S--------RTDFDLK------RHMEHSNEDFN-------YIDPQTNERYVPYCIE-PSL 359

Query: 529 GSIERFIGIMIENFKGNLP-----------LWLSPIQAIVTTITSSAVEYAQEIANLLKS 577
           G+    +  + + ++                 L+P +A +  ++    E A E+   L +
Sbjct: 360 GADRVTLAFLCDAYEEEQLENDSRTVLRFHPALAPYKAAILPLSKKLSEGATEVFAEL-A 418

Query: 578 HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
               ++ D    +I  + R       P  I        ++++ +R   +    ++ + + 
Sbjct: 419 KDFMVDFDETG-SIGKRYRRQDEIGTPFCITYDFDSVEDKAVTVRDRDTMEQVRMPISEL 477

Query: 638 IPILTK 643
              L K
Sbjct: 478 KGFLEK 483


>gi|222151464|ref|YP_002560620.1| glycyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
 gi|254781879|sp|B9E6V6|SYG_MACCJ RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|222120589|dbj|BAH17924.1| glycyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
          Length = 462

 Score = 82.9 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 51/347 (14%), Positives = 110/347 (31%), Gaps = 51/347 (14%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    + +  +S  ++LP  +A+ G  +RNE +
Sbjct: 151 FNLMFKTFQGVTESSTNEIFLRPETAQGIFVNYKNVQRSMRKKLPFGIAQVGKSFRNEIT 210

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
              + + R R F Q +   FC    E  + E  K  N      KD G ++   KL    E
Sbjct: 211 PG-NFIFRTREFEQMELEFFCKPGTEIEWQEYWK--NFAAKWLKDLGIKEENTKLRDHDE 267

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
             +   + + +A   +       K         G+          + ++ LK        
Sbjct: 268 DEL---SHYSNATTDI-----EYKFPFGWGELWGIAS--------RTDFDLKA------- 304

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK--------- 543
                      S  +  Y +  + + +         G+    +  + + ++         
Sbjct: 305 -------HMAASGDDFSYHDQETNEKYVPYCIEPSLGADRVTLAFLCDAYEEETLEGGDS 357

Query: 544 ---GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
                    L+P +A +  ++      A ++   L S   +I+ D   ++I  + R    
Sbjct: 358 RTVMRFHPALAPYKAAILPLSKKLSPDAMKVYEAL-SADFAIDFDES-QSIGKRYRRQDE 415

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLP 647
              P  I        +  + +R   +    ++ + + +     E + 
Sbjct: 416 IGTPFCITFDFDSLEDNQVTVRDRDTMEQVRMPISE-VKAFLDEKIK 461


>gi|170055177|ref|XP_001863466.1| prolyl-tRNA synthetase [Culex quinquefasciatus]
 gi|167875210|gb|EDS38593.1| prolyl-tRNA synthetase [Culex quinquefasciatus]
          Length = 315

 Score = 82.9 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 47/298 (15%), Positives = 96/298 (32%), Gaps = 27/298 (9%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRR--KIKDDYEEINTPQVLDQHLWQQSGHWDSYR 315
           I + G+G  +      +  Q  +  +    +     +++  P +    LW+QSG  +S  
Sbjct: 23  IRQAGNGTFYLMPLLQRSLQKAVDLVDHFMQRHASAQKLTLPILTAASLWRQSGRLESAG 82

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPS 374
             +        T +  +   L P +     A+       SYR  P+RL +  + +R+E  
Sbjct: 83  PELMRT-----TDRHGKQQILGPTHEESITALVASISPVSYRAFPLRLYQISTKFRDEMK 137

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECL-KIHNLIISIYKDFGFEKIMVKLSTRPEK 433
               GLMR + F   D + F        E   +++     ++   G   + V+  T    
Sbjct: 138 PRF-GLMRAKEFLMKDLYTFDVGRGEARETYEEVNEAYRKLFDAVGVGYVKVRGDTGTIG 196

Query: 434 RVGSDALW---DDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRD 490
              S       +  E+ +    +         +  G     GA         +    G +
Sbjct: 197 GSESHEYHFPSEVGEDQLVCCGE-CGMGWNQEMFGGCERCGGA--------NVSRQAGIE 247

Query: 491 WQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGNLP 547
                  +D        A ++  + +   P  +    +G  + R +   +E   G   
Sbjct: 248 V-AHAFILDDKYSKTMGAKFLAQNGK---PETLQMGCYGIGVTRLLAAGVEVLSGEKG 301


>gi|317472458|ref|ZP_07931781.1| glycyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
 gi|316900076|gb|EFV22067.1| glycyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
          Length = 463

 Score = 82.9 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 47/329 (14%), Positives = 102/329 (31%), Gaps = 22/329 (6%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPS 374
            N+        T     T  L+P    G    F +  + S +++P  + + G  +RNE +
Sbjct: 152 FNLMFKTFQGVTEDAKNTVYLRPETAQGIFVNFKNVQRTSRKKIPFGIGQVGKSFRNEIT 211

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              +   R R F Q +   FC  +             I+  K  G     +++    ++ 
Sbjct: 212 PG-NFTFRTREFEQMELEFFCEPDTDLEWFAYWKEFCINWLKTLGITDDQMRVRDHGKEE 270

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           +   + +  A + +   L          I       +   Y        ++  G D    
Sbjct: 271 L---SFYSKATSDI-EFLFPFGWGELWGI------ADRTDYDLT---QHQNTSGEDLT-- 315

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQ 554
               D     R+  + +         V +        E  +    +         ++P++
Sbjct: 316 --YFDDEKKERYIPYVIEPSLGADR-VTLAFLCAAYDEEELEGGDKRTVLRFHPAIAPVK 372

Query: 555 AIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
             V  ++    E A ++   L + + + E D R   I  + R       P  +       
Sbjct: 373 IGVLPLSKKLAEGAGKVYETL-AKYYNCEYDERGN-IGKRYRRQDEIGTPFCVTYDFDSE 430

Query: 615 SERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            + ++ +R   +   ++V + D      K
Sbjct: 431 EDGAVTVRDRDTMEQERVKIEDLKEYFEK 459


>gi|238924230|ref|YP_002937746.1| glycyl-tRNA synthetase [Eubacterium rectale ATCC 33656]
 gi|259511935|sp|C4ZAV7|SYG_EUBR3 RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|238875905|gb|ACR75612.1| glycyl-tRNA synthetase [Eubacterium rectale ATCC 33656]
          Length = 465

 Score = 82.9 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 51/344 (14%), Positives = 104/344 (30%), Gaps = 49/344 (14%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPS 374
            N+        T     T  L+P    G    F +  + S +++P  + + G  +RNE +
Sbjct: 151 FNLMFKTFQGVTEDAKNTVYLRPETAQGIFVNFKNVQRTSRKKIPFGIGQVGKSFRNEIT 210

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              +   R R F Q +   FC                       G ++  ++L       
Sbjct: 211 PG-NFTFRTREFEQMELEFFCEPGTDLEWFKYWRGFCRDWLISLGIKEDEMRLRDHDPAE 269

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           +                     +     I      G G  +G   +    D +GR  +  
Sbjct: 270 L------------------AFYSKGTTDIEFLFPFGWGELWGIA-DRTDYD-LGRHQEVS 309

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKG------ 544
                    + F+    +  +EK  P +I     G+    +  +     E   G      
Sbjct: 310 G-----QDLTYFD----DQKNEKYLPYVIE-PSLGADRVVLAFLCAAYDEEDIGTPEKPD 359

Query: 545 -----NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
                +    L+P++  V  ++    E A+++   L     + E D R  TI  + R   
Sbjct: 360 VRTVFHFHPALAPVKIGVLPLSKKLNESAEKVFAQLSKT-YNCEYDDRG-TIGKRYRRQD 417

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
               P  +        +  + +R   +   +++++ +      K
Sbjct: 418 EIGTPFCVTYDFDSEEDHCVTVRDRDTMEQERIAIDELDAYFAK 461


>gi|218186121|gb|EEC68548.1| hypothetical protein OsI_36857 [Oryza sativa Indica Group]
          Length = 490

 Score = 82.9 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 54/165 (32%), Gaps = 13/165 (7%)

Query: 487 IGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKG 544
           I R  + G I Q+         A             ++    +G  + R +   IE    
Sbjct: 323 IKRGIEVGHIFQLGTKYSEAMKATVQGEDG---RNQVLTMGCYGIGVTRVVAAAIEQNHD 379

Query: 545 N----LPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                 P  ++P Q  +  +           A+E+ N L+SH + +  D R E       
Sbjct: 380 ERGIIWPDAIAPFQVAILPMNMHKSFRVQALAEELYNTLRSHGIDVILDDRKERPGVMFA 439

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           +  +  +P  I+ GD+      I  +       Q +   + +  L
Sbjct: 440 DMELIGVPHSIVIGDRNLDNEEIEYKNRRVGEKQMIKTGEIVDFL 484



 Score = 45.9 bits (107), Expect = 0.019,   Method: Composition-based stats.
 Identities = 29/131 (22%), Positives = 50/131 (38%), Gaps = 7/131 (5%)

Query: 314 YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP--VR-LAEFGSVYR 370
            R + + +    +T  D    + + M   G +     GL  Y  LP  +R L +  + +R
Sbjct: 1   MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGL--YTWLPTGLRVLKKIQTKFR 58

Query: 371 NEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IHNLIISIYKDFGFEKIMVKLST 429
           +E      G+MR R F   DA+ F T ++   E    ++     I+   G +   V+  T
Sbjct: 59  DEVRPRF-GVMRSREFLMKDAYSFHTSQESLQETYDAMYEAYSKIFSRMGLDFRPVQADT 117

Query: 430 RPEKRVGSDAL 440
                  S   
Sbjct: 118 GSIGGSASHEF 128



 Score = 38.2 bits (87), Expect = 4.8,   Method: Composition-based stats.
 Identities = 12/81 (14%), Positives = 35/81 (43%), Gaps = 3/81 (3%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +Q  L+       ++E   H+ + R   +  +A   SG+  W   G ++ + + +  R 
Sbjct: 3   TSQYLLSTLKETPADAEVISHQLMLRAGMIRKLA---SGLYTWLPTGLRVLKKIQTKFRD 59

Query: 286 KIKDDYEEINTPQVLDQHLWQ 306
           +++  +  + + + L +  + 
Sbjct: 60  EVRPRFGVMRSREFLMKDAYS 80


>gi|219852785|ref|YP_002467217.1| histidyl-tRNA synthetase [Methanosphaerula palustris E1-9c]
 gi|254782336|sp|B8GDZ3|SYH_METPE RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|219547044|gb|ACL17494.1| histidyl-tRNA synthetase [Methanosphaerula palustris E1-9c]
          Length = 409

 Score = 82.9 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 61/418 (14%), Positives = 126/418 (30%), Gaps = 64/418 (15%)

Query: 268 WHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADD 326
           +     +  + +   MR  ++   Y E+ TP   D  L+            M+  +    
Sbjct: 11  FLPDEMEARRMIEGRMREAVRRWGYREVATPIFEDLSLFTMRSGQGII-DEMYVFQD--- 66

Query: 327 TIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
             K  R  AL+P      + ++ +  +   + P+R   F   +R E         R R F
Sbjct: 67  --KGGRDLALRPELTAAVLRMYVNEARVLAK-PLRWCYFADCFRYERPQK----GRYRQF 119

Query: 387 TQD------------DAHVFCTKEQMFNEC-------LKIHNLIISIYKDFGFEKIMVKL 427
            Q             DA V    +             +    L+  +  D G E     +
Sbjct: 120 WQFGVELIGADTAAADAEVILVADNAIRSSGLDYDLKIGHLGLMKHLLADVGEEVRRKVM 179

Query: 428 STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE------- 480
           +   +K    D L D  E      L          +    L    A  GP  E       
Sbjct: 180 AYLDKKEF--DGLKDYLETAGLAALTD---PLTRLLAAETLDEAFAVTGPLPEEGRIREM 234

Query: 481 YILKDAIG-RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
             L DA G R      I    +  +              +     + V G   R   +  
Sbjct: 235 AALLDATGVRYSYNFGIARGLDYYTGM-----VFEGFAKNLGAESQIVGGGAYRLAQVFG 289

Query: 540 ENFKGNLPLWLSPIQAIV--------------TTITSSAVEYAQEIANLLKSHHLSIETD 585
            +   ++   +   + +V                 T+    +A  +AN  ++  +  + D
Sbjct: 290 GDDAPSVGFAIGFDRVMVALGEVQTRKQKIVGVVSTAEGRPFAFRVANAFRTAGIRADLD 349

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             +  +  ++   + +     ++ G++E +  ++ ++   + T   V++  A+  +  
Sbjct: 350 LSDRGLGAQLARAAKE-ADFAVLIGEREVATGTVTLKNLATGTQTAVTIDLAVRTVID 406


>gi|314923081|gb|EFS86912.1| glycyl-tRNA synthetase [Propionibacterium acnes HL001PA1]
          Length = 506

 Score = 82.9 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 60/369 (16%), Positives = 116/369 (31%), Gaps = 54/369 (14%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           EE+N P   ++  W +         NM                 L+P    G    F + 
Sbjct: 166 EEVNCPNCGNKGQWTEPR-----DFNMMLKTYLGPVEDKSGLHYLRPETAQGIFVNFQNV 220

Query: 352 LKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
           L S  ++ P  +A+ G  +RNE +   + + R R F Q +   F              + 
Sbjct: 221 LTSARKKPPFGIAQTGKSFRNEITPG-NFIFRTREFEQMEMEFFVEPGTDEEWHQYWIDA 279

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
             + Y D G     ++    P+         +   +  K  +D          + G L G
Sbjct: 280 RTAWYTDLGINPDNLRHYEHPK---------EKLSHYSKRTVDVEYKFGFTGSDWGELEG 330

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
                  + ++ L +      +              +  Y +  + K +   +     G 
Sbjct: 331 IAN----RTDFDLGNHSRHSGK--------------DLSYYDQANNKRYLPYVIEPAAGL 372

Query: 531 IERFIGIM----IENFKGN------------LPLWLSPIQAIVTTIT--SSAVEYAQEIA 572
               +  M     E+   N            L   LSP++A V  ++  S     A+++A
Sbjct: 373 TRSLMAFMVDAYTEDEAPNAKGGVDKRTVLKLDPRLSPVKAAVLPLSRNSDLSPKARDLA 432

Query: 573 NLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
             L+ H  +++ D     I  + R       P  +        + ++ +R   +   Q+V
Sbjct: 433 ARLREH-WNVDFDDAQA-IGKRYRRQDEIGTPFCVTVDFDTLEDDAVTVRERDTMAQQRV 490

Query: 633 SLLDAIPIL 641
           S+      L
Sbjct: 491 SIDKVEEYL 499


>gi|302339640|ref|YP_003804846.1| glycyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
 gi|301636825|gb|ADK82252.1| glycyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
          Length = 443

 Score = 82.9 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 64/426 (15%), Positives = 138/426 (32%), Gaps = 66/426 (15%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKDDYEEIN---TPQVLDQHLWQQSGHWDSYRA--- 316
           SG   +   G ++   +  Y  R++   ++ I       ++   +W+ SGH D++     
Sbjct: 33  SGAWDYGPLGVELKNRVKDYWWREMTQLHDNIVGLDAAIMMHPRVWEASGHVDNFSDPLV 92

Query: 317 -----------------------------------NMFAVKCADDTIKDLRTFALKPMNC 341
                                              N+           D     L+P   
Sbjct: 93  DCKQCKSRFRADQIDLEAPCPVCGNSGTFTEPRDFNLMFATHIGPVKDDGSIVYLRPETA 152

Query: 342 PGHVAVFNHGLKSYR-ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
            G    F + +++ R ++P  +A+ G  +RNE + + + + R   F Q +   F    + 
Sbjct: 153 QGIFVNFRNVVQTSRVKIPFGIAQVGKAFRNEVT-TKNFIFRTCEFEQMEMQFFVKPGED 211

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQ 460
                   N  IS Y   G  K  ++       R G + L   A+       D      +
Sbjct: 212 DKWFEFWKNERISYYDKLGIRKEKLRF-----HRHGENELAHYAK-------DAFDIEYE 259

Query: 461 DRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHP 520
             +    L G  +    + ++ L  +   ++    +    +  SR+  + + + +     
Sbjct: 260 FPMGWQELEGIHS----RTDFDL--SRHAEYSGKDLTYLDDDKSRYIPYVIETSAGLTRS 313

Query: 521 VMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTI--TSSAVEYAQEIANLLKSH 578
           V++  +     E   G  I     +    L+P+   V  +       E AQ +A+ L+  
Sbjct: 314 VLMVLSDAYEEEELEGGDI-RTVLHFHPSLAPVTVAVLPLVKKDGIAEIAQGVASDLREE 372

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
             ++  D     I  + R       P  +        ++++ +R   S    +V + +  
Sbjct: 373 -FAVFYDQSGA-IGRRYRRMDEIGTPFCVTIDYDTKEDKTVTLRFRDSMEQVRVPIDELT 430

Query: 639 PILTKE 644
             +  E
Sbjct: 431 SRIRAE 436


>gi|213416593|ref|ZP_03349737.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E01-6750]
          Length = 223

 Score = 82.9 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 57/177 (32%), Gaps = 13/177 (7%)

Query: 477 PKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERF 534
           P  +      I R  + G I Q+         A             ++    +G  + R 
Sbjct: 46  PSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDG---RNQILTMGCYGIGVTRV 102

Query: 535 IGIMIENF----KGNLPLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDF 586
           +   IE          P  ++P Q  +  +         E A+++ + L++  + +  D 
Sbjct: 103 VAAAIEQNFDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLMDD 162

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           R E       +  +  IP  I+ GD+      I  +   S     +   D +  L K
Sbjct: 163 RKERPGVMFADMELIGIPHTIVIGDRNLDNDDIEYKYRRSGEKSLIKTGDIVDYLVK 219


>gi|146319436|ref|YP_001199148.1| seryl-tRNA synthetase [Streptococcus suis 05ZYH33]
 gi|145690242|gb|ABP90748.1| Seryl-tRNA synthetase [Streptococcus suis 05ZYH33]
          Length = 428

 Score = 82.9 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/222 (17%), Positives = 86/222 (38%), Gaps = 20/222 (9%)

Query: 242 EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINT 296
           E + H  L  ++D+          G+  +F+   G ++ + L ++M    I + Y+EI T
Sbjct: 179 EPKAHWDLGEDLDILDWERGAKVTGARFLFYKNLGARLERALYNFMLDEHIAEGYQEIIT 238

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +++      +G +  ++ + F +   +        F L P         + + +   +
Sbjct: 239 PYMVNHDSMFGTGQYPKFKEDTFELADTN--------FVLIPTAEVPLTNYYRNEILEEK 290

Query: 357 ELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           +LP+        +R+E   +     GL+R+  F + +   F T EQ ++E  K+     +
Sbjct: 291 DLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFATPEQSYDELEKMTANAEN 350

Query: 414 IYKDFGFEKI----MVKLSTRPEKRVGSDALWDDAENIMKGV 451
           I +  G                  +     +W  A+N  + +
Sbjct: 351 ILQKLGLPYRVLALCTGDMGFSAAKTYDLEVWIPAQNAYREI 392


>gi|315023937|gb|EFT36939.1| glycyl-tRNA synthetase [Riemerella anatipestifer RA-YM]
          Length = 513

 Score = 82.9 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 61/352 (17%), Positives = 118/352 (33%), Gaps = 55/352 (15%)

Query: 308 SGHWDSYRA-NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH-GLKSYRELPVRLAEF 365
           S +W   R  N+        + ++     L+P    G    F++    S  +LP  +A+ 
Sbjct: 186 SKNWTEVRQFNLMFGTKLGASAENAMELYLRPETAQGIFVNFSNVQKTSRHKLPFGIAQI 245

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKI 423
           G  +RNE   +   + R+R F Q +   F     E  F E  K   L   +    G E  
Sbjct: 246 GKAFRNEIV-ARQFIFRMREFEQMEMQFFVAPGTELSFYEEWKQKRLNWHLALGLGTENY 304

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
                 +                      D      + +   G    EG      F+   
Sbjct: 305 KFHDHEKLAHYAN-------------AAADI-----EFKFPFGFKELEGIHSRTDFDL-- 344

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM----- 538
             +    +    +Q     P R          E   P ++  +V G    F+ +      
Sbjct: 345 --SAHEKFSGRKLQYFD--PER---------GESYVPYVVETSV-GLDRMFLAVFSSSLK 390

Query: 539 ---IENFKGNL----PLWLSPIQAIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNE 589
              +E+         P  L+P++A +  +       E+A++I N LK +  ++  + ++ 
Sbjct: 391 EEALEDGSTRTVLSLPPALAPVKAAILPLVKKDGLPEFAEKIFNELK-YDFNVIFEEKD- 448

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           +I  + R       P  I       ++ ++ +R   +   ++VS+ D   I+
Sbjct: 449 SIGKRYRRQDAIGTPFCITVDHDSLNDNTVTLRERDTMKQERVSVEDLRKII 500


>gi|291458568|ref|ZP_06597958.1| glycine--tRNA ligase [Oribacterium sp. oral taxon 078 str. F0262]
 gi|291419101|gb|EFE92820.1| glycine--tRNA ligase [Oribacterium sp. oral taxon 078 str. F0262]
          Length = 476

 Score = 82.9 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 43/333 (12%), Positives = 92/333 (27%), Gaps = 46/333 (13%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    F +  + S ++LP  + + G  +RNE +
Sbjct: 165 FNLMFKTFQGVTEDAKDAVYLRPETAQGIFVNFKNVQRTSRKKLPFGIGQIGKSFRNEIT 224

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              +   R R F Q +   FC             +   +     G    M++     ++ 
Sbjct: 225 PG-NFTFRTREFEQMELEFFCKPGTDLEWFQYWKDYCKNWLLTLGLPGKMLRARDHDKEE 283

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           +   + +  A   +                 G+            +    D        G
Sbjct: 284 L---SFYSKATTDL-----EFLFPFGWGELWGIA-----------DRTDYDLSRHQEISG 324

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI------------ENF 542
                       +  Y +  ++  +   +     G+    +  +             E  
Sbjct: 325 Q-----------DMSYFDDETKDHYIPYVIEPSLGADRVTLAFLCAAYDVEELEGGEERT 373

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
                  ++P++  V  ++    E A++I   L S     E D R   I  + R      
Sbjct: 374 VLRFHPAIAPVKIGVLPLSKKLSEGAEKICTEL-SRRWYCEYDDRGN-IGKRYRRQDEIG 431

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
            P  +        +  + +R   S    ++ + 
Sbjct: 432 TPYCVTYDFDSEEDGCVTVRERDSMQQVRLPIA 464


>gi|73748597|ref|YP_307836.1| glycyl-tRNA synthetase [Dehalococcoides sp. CBDB1]
 gi|73660313|emb|CAI82920.1| glycyl-tRNA synthetase [Dehalococcoides sp. CBDB1]
          Length = 433

 Score = 82.9 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 63/442 (14%), Positives = 136/442 (30%), Gaps = 88/442 (19%)

Query: 251 REMDLFHIAED---GSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEIN---TPQVLDQHL 304
           R   +F  +E     +    +   G ++ + +     R +  D +++       ++   +
Sbjct: 10  RRGFIFPSSEIYGGLNSCWDYGPLGVELKRNVKEAWWRYMVRDRDDVVGLDASIIMHPRV 69

Query: 305 WQQSGHWDSYRANMFAVKCADDTIK-----------------DLRTF------------- 334
           W+ SGH   +   M   K      +                 + R F             
Sbjct: 70  WEASGHVAGFSDPMVDCKKCKMRWRPTDLAEPKCPACGGELTESRQFNLMFKTFMGPVEE 129

Query: 335 -----ALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQ 388
                 L+P    G    F + L +  ++LP  +A+ G  +RNE + + + + R R F Q
Sbjct: 130 AASIVYLRPETAQGIFVNFENVLNTTRKKLPFGIAQIGKSFRNEIT-TGNFIFRSREFEQ 188

Query: 389 DDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIM 448
            +   F           +     ++ YK+ G     ++L         SD L   A+   
Sbjct: 189 MELEYFVKPGADDACLEEWTQYRLNWYKNLGMNPENLRLRAHR-----SDELAHYAKGC- 242

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
                         +    L G               A  RD+            S  + 
Sbjct: 243 ------YDVEYNFPMGWSELEG--------------IANRRDFDLTQ----HAKYSGKSL 278

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK-----------GNLPLWLSPIQAIV 557
            Y +  +++     +     G     +  +I+ +             +L   L+P +  V
Sbjct: 279 EYFDEETKEHFVPYVIEPSAGVERSTLAFLIDAYAEEPDKDEIRTVLHLHPALAPYKIAV 338

Query: 558 TTITSSAV--EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEAS 615
             ++   +  +YA++I   L+     +  D   ++I  + R       P  +    +   
Sbjct: 339 LPLSKKEILSDYARKIYADLRKC-WMVAYDDS-QSIGRRYRRQDEIGTPYCVTVDFQSLE 396

Query: 616 ERSIGIRRFGSTTTQKVSLLDA 637
           +  + +R   S    +V + + 
Sbjct: 397 DGMVTVRDRDSMAQIRVKVSEL 418


>gi|187777500|ref|ZP_02993973.1| hypothetical protein CLOSPO_01075 [Clostridium sporogenes ATCC
           15579]
 gi|187774428|gb|EDU38230.1| hypothetical protein CLOSPO_01075 [Clostridium sporogenes ATCC
           15579]
          Length = 463

 Score = 82.5 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 57/358 (15%), Positives = 119/358 (33%), Gaps = 55/358 (15%)

Query: 306 QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAE 364
           +     D  + N+        T        L+P    G    F +  + S +++P  +A+
Sbjct: 142 KAKSFTDIRKFNLMFKTFQGVTEDAKSEIYLRPETAQGIFVNFKNVQRTSRKKVPFGIAQ 201

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEK 422
            G  +RNE +   +   R R F Q +   FC    +  +    K +     I      E 
Sbjct: 202 IGKSFRNEITPG-NFTFRTREFEQMELEFFCKPGTDLEWFNYWKDYCWNFLINLGINKES 260

Query: 423 IMVKLSTRPEKRVGSD--------------ALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
           I  +  ++ E    S+               LW  A+     +   +++S +D +N  + 
Sbjct: 261 IRFRDHSQEELSHYSNATSDIEFLFPFGWGELWGVADRTDFDLKKHMEHSGED-LNY-LD 318

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
                 Y P   Y ++ ++G D       VD                +  + + +H    
Sbjct: 319 PTTKERYVP---YCIEPSLGADRVVLAFLVDAYDEEEL------EGGDVRNVLHLH---- 365

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRN 588
                                L+P +A V  ++    + +QE+ ++L     +I+ D   
Sbjct: 366 -------------------PALAPFKAAVLPLSKKLSDESQEVYSMLSKK-FNIDYDEAG 405

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
            +I  + R       P  I        + ++ IR   +    +V++ + +    ++ L
Sbjct: 406 -SIGKRYRREDEIGTPYCITVDFDTLEDNTVTIRDRDTMDQIRVNINE-LEKFIEDKL 461


>gi|331091565|ref|ZP_08340402.1| glycyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_46FAA]
 gi|330403730|gb|EGG83284.1| glycyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_46FAA]
          Length = 462

 Score = 82.5 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 45/388 (11%), Positives = 117/388 (30%), Gaps = 54/388 (13%)

Query: 271 KGWKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTI 328
            G ++ +++ ++ + +++      E+  P     +  +       ++      + A +T+
Sbjct: 110 NGIELTESVDAWSKEQMEAWIAEHEVPCPTCKKHNFTEIRQFNLMFKTFQGVTEDAKNTV 169

Query: 329 KDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
                  L+P    G    F +  + S +++P  + + G  +RNE +   +   R R F 
Sbjct: 170 ------YLRPETAQGIFVNFKNVQRTSRKKIPFGIGQIGKSFRNEITPG-NFTFRTREFE 222

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENI 447
           Q +   FC                +      G ++  V+      + +     +  A   
Sbjct: 223 QMELEFFCEPGTDLEWFAYWKKFCLDWLYSLGLKEDEVRARDHSPEEL---CFYSKATTD 279

Query: 448 MKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFN 507
           +                 G+            +    D                  S+ +
Sbjct: 280 V-----EFLFPFGWGELWGIA-----------DRTDYDLS-----------QHQEVSKQD 312

Query: 508 AFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK------------GNLPLWLSPIQA 555
             Y +   ++ +   +     G+    +  +   +              +    L+PI+ 
Sbjct: 313 MTYFDDEKKEKYIPYVIEPSLGADRMVLAFLCSAYDEEELEGGDVRTVMHFHPALAPIKI 372

Query: 556 IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEAS 615
            V  ++    E A+++   L     + E D R   I  + R       P  +        
Sbjct: 373 GVLPLSKKLNEGAEKVFAELSKT-YNCEFDDRGN-IGKRYRRQDEIGTPFCVTYDFDSEE 430

Query: 616 ERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           + ++ +R   +   +++ + D      K
Sbjct: 431 DGAVTVRDRDTMEQERIKIEDLKAYFEK 458


>gi|331233138|ref|XP_003329230.1| prolyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309308220|gb|EFP84811.1| prolyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 301

 Score = 82.5 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 30/176 (17%), Positives = 62/176 (35%), Gaps = 7/176 (3%)

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
              EI+ P +  Q LW +SG  +     +F +K      +   +  L P +      +  
Sbjct: 5   GASEISMPLLQSQKLWDRSGRSNQAGPELFRLKD-----RKGSSLLLSPTHEEEVTNLVK 59

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK-IH 408
             ++S ++LP++L   G  +R+E      GL+R R F   D + F           K + 
Sbjct: 60  SDIQSGKQLPIKLFHIGRKFRDEARPR-AGLLRSREFIMKDLYTFDADASAAMASYKEVQ 118

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
                I++  G    + +  +       S      + +    ++   +      + 
Sbjct: 119 EAYRRIFETIGIPFSVAEADSGAIGGATSHEYHYKSSSGEDSLIHCTRCPYTANLE 174


>gi|242242837|ref|ZP_04797282.1| glycyl-tRNA synthetase [Staphylococcus epidermidis W23144]
 gi|242233738|gb|EES36050.1| glycyl-tRNA synthetase [Staphylococcus epidermidis W23144]
          Length = 463

 Score = 82.5 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 50/343 (14%), Positives = 105/343 (30%), Gaps = 49/343 (14%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    + +  +S  ++LP  + + G  +RNE +
Sbjct: 151 FNLMFKTFQGVTEDSTNELFLRPETAQGIFVNYKNVQRSMRKKLPFGIGQIGKSFRNEIT 210

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
              + + R R F Q +   FC   E++  +           +K F  E +     +    
Sbjct: 211 PG-NFIFRTREFEQMELEFFCKPGEEIEWQNY---------WKTFASEWLTDLNISEDNM 260

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
           R+      + +           K         G+          + ++ L+         
Sbjct: 261 RLRDHDEDELSHYSNATTDIEYKFPFGWGELWGIAS--------RTDFDLR--------- 303

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK---------- 543
              Q   +    F  ++    +EK  P  I     G+    +  + + +           
Sbjct: 304 ---QHSEHSGEDFK-YHDPETNEKYIPYCIE-PSLGADRVTLAFLCDAYAEEGVEGSKDA 358

Query: 544 ---GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
               +    L+P +A V  ++      A +I   L S   +I+ D   ++I  + R    
Sbjct: 359 RTVMHFHPALAPYKAAVLPLSKKLSSEAIKIFEQLSSS-FAIDFDES-QSIGKRYRRQDE 416

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              P  I        +  + +R   S    ++ + +    L  
Sbjct: 417 IGTPYCITFDFDSLEDNQVTVRDRDSMEQVRMPISELETFLAD 459


>gi|146321639|ref|YP_001201350.1| hypothetical protein SSU98_1792 [Streptococcus suis 98HAH33]
 gi|145692445|gb|ABP92950.1| SerS [Streptococcus suis 98HAH33]
 gi|292559062|gb|ADE32063.1| SerS [Streptococcus suis GZ1]
          Length = 467

 Score = 82.5 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/222 (17%), Positives = 86/222 (38%), Gaps = 20/222 (9%)

Query: 242 EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINT 296
           E + H  L  ++D+          G+  +F+   G ++ + L ++M    I + Y+EI T
Sbjct: 179 EPKAHWDLGEDLDILDWERGAKVTGARFLFYKNLGARLERALYNFMLDEHIAEGYQEIIT 238

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +++      +G +  ++ + F +   +        F L P         + + +   +
Sbjct: 239 PYMVNHDSMFGTGQYPKFKEDTFELADTN--------FVLIPTAEVPLTNYYRNEILEEK 290

Query: 357 ELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           +LP+        +R+E   +     GL+R+  F + +   F T EQ ++E  K+     +
Sbjct: 291 DLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFATPEQSYDELEKMTANAEN 350

Query: 414 IYKDFGFEKI----MVKLSTRPEKRVGSDALWDDAENIMKGV 451
           I +  G                  +     +W  A+N  + +
Sbjct: 351 ILQKLGLPYRVLALCTGDMGFSAAKTYDLEVWIPAQNAYREI 392


>gi|229032557|ref|ZP_04188522.1| Glycyl-tRNA synthetase [Bacillus cereus AH1271]
 gi|228728742|gb|EEL79753.1| Glycyl-tRNA synthetase [Bacillus cereus AH1271]
          Length = 487

 Score = 82.5 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 52/366 (14%), Positives = 110/366 (30%), Gaps = 55/366 (15%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
            E+  P    +   +          N+        T        L+P    G    F + 
Sbjct: 159 HEVKCPDCGSEEFTEIRQF------NLMFKTFQGVTESSTNEIFLRPETAQGIFVNFKNV 212

Query: 352 LKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
            +S  ++LP  + + G  +RNE +   +   R R F Q +   FC   +           
Sbjct: 213 QRSMRKKLPFGIGQIGKSFRNEITPG-NFTFRTREFEQMELEFFCKPGEDLEWFAFWRET 271

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRVGSDAL--WDDAENIMKGVLDTIKNSSQDRINTGVL 468
             +     G  +  ++L        G + L  + +A   +       +         GV 
Sbjct: 272 CKNWLLSLGMTEESMRLRDH-----GEEELSHYSNATTDI-----EFRFPFGWGELWGVA 321

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
                    + ++ LK              DFN       +     +E+  P  I     
Sbjct: 322 S--------RTDFDLK------RHMEHSNEDFN-------YIDPQTNERYVPYCIE-PSL 359

Query: 529 GSIERFIGIMIENFKGNLP-----------LWLSPIQAIVTTITSSAVEYAQEIANLLKS 577
           G+    +  + + ++                 L+P +A +  ++    E A E+   L +
Sbjct: 360 GADRVTLAFLCDAYEEEQLENDSRTVLRFHPALAPYKAAILPLSKKLSEGATEVFAEL-A 418

Query: 578 HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
               ++ D    +I  + R       P  I        ++++ +R   +    ++ + + 
Sbjct: 419 KDFMVDFDETG-SIGKRYRRQDEIGTPFCITYDFDSVEDKAVTVRDRDTMEQVRMPISEL 477

Query: 638 IPILTK 643
              L K
Sbjct: 478 KGFLEK 483


>gi|239637623|ref|ZP_04678595.1| glycyl-tRNA synthetase [Staphylococcus warneri L37603]
 gi|239596841|gb|EEQ79366.1| glycyl-tRNA synthetase [Staphylococcus warneri L37603]
          Length = 463

 Score = 82.5 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 47/330 (14%), Positives = 99/330 (30%), Gaps = 23/330 (6%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    + +  +S  ++LP  + + G  +RNE +
Sbjct: 151 FNLMFKTFQGVTEDSTNELFLRPETAQGIFVNYKNVQRSMRKKLPFGIGQVGKSFRNEIT 210

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
              + + R R F Q +   FC   E++  +           +K F  + +     +    
Sbjct: 211 PG-NFIFRTREFEQMELEFFCKPGEEIEWQNY---------WKTFASQWLKDLNISEENM 260

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
           R+      + +           K         G+          + ++ LK       + 
Sbjct: 261 RLRDHDADELSHYSNATTDIEYKFPFGWGELWGIAS--------RTDFDLKKHSEHSGED 312

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI 553
                D     ++  + +          +       S E   G   E         L+P 
Sbjct: 313 FKYH-DPETNEKYIPYCIEPSLGADRVTLAFLCDAYSQEGVEGSKDERTVLKFHPALAPY 371

Query: 554 QAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
           +A +  ++      A +I   L     SI+ D   ++I  + R       P  I      
Sbjct: 372 KAAILPLSKKLSSEAIKIFEQLSQS-FSIDFDES-QSIGKRYRRQDEIGTPYCITFDFDS 429

Query: 614 ASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             +  + +R   S    ++ + +    L +
Sbjct: 430 LEDNQVTVRDRDSMEQVRMPISELEAFLAE 459


>gi|315928700|gb|EFV07980.1| Proline-tRNA ligase [Campylobacter jejuni subsp. jejuni 305]
          Length = 347

 Score = 82.5 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 59/165 (35%), Gaps = 9/165 (5%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNLP 547
           +  + G I       S+         + K  P  +     G   R + + IE N      
Sbjct: 185 KGIEVGHIFKLGQKYSKAMNANFLDENGKSQPFYMGCYGIGVS-RLLAVAIEANHDEKGC 243

Query: 548 LW---LSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           +W   L+P    +         A+E+A ++   L +  L +  D RNE    K+ +  + 
Sbjct: 244 IWNKTLAPFVLEIIVSNLKDEKALEFANKLYRDLTNLGLEVLLDDRNERFGVKMNDFELM 303

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
             P  ++ G K      I + +      + +   + + IL K+ L
Sbjct: 304 GFPYALVIG-KGLENNEIELIQREGLVKELIKTDELMEILKKKVL 347


>gi|314966850|gb|EFT10949.1| glycyl-tRNA synthetase [Propionibacterium acnes HL082PA2]
 gi|314981192|gb|EFT25286.1| glycyl-tRNA synthetase [Propionibacterium acnes HL110PA3]
 gi|315091764|gb|EFT63740.1| glycyl-tRNA synthetase [Propionibacterium acnes HL110PA4]
 gi|315093229|gb|EFT65205.1| glycyl-tRNA synthetase [Propionibacterium acnes HL060PA1]
 gi|327327676|gb|EGE69452.1| glycine--tRNA ligase [Propionibacterium acnes HL103PA1]
          Length = 506

 Score = 82.5 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 61/369 (16%), Positives = 116/369 (31%), Gaps = 54/369 (14%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           EE+N P   ++  W +         NM                 L+P    G    F + 
Sbjct: 166 EEVNCPNCGNKGQWTEPR-----DFNMMLKTYLGPVEDKSGLHYLRPETAQGIFVNFQNV 220

Query: 352 LKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
           L S  ++ P  +A+ G  +RNE +   + + R R F Q +   F              + 
Sbjct: 221 LTSARKKPPFGIAQTGKSFRNEITPG-NFIFRTREFEQMEMEFFVEPGTDEEWHQYWIDA 279

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
             + Y D G     ++    P+         +   +  K  +D          + G L G
Sbjct: 280 RTAWYTDLGINPDNLRHYEHPK---------EKLSHYSKRTVDVEYKFGFTGSDWGELEG 330

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
                  + ++ L +      +              +  Y +  + K +   +     G 
Sbjct: 331 IAN----RTDFDLGNHSRHSGK--------------DLSYYDQANNKRYLPYVIEPAAGL 372

Query: 531 IERFIGIM----IENFKGN------------LPLWLSPIQAIVTTIT--SSAVEYAQEIA 572
               +  M     E+   N            L   LSP++A V  ++  S     A+++A
Sbjct: 373 TRSLMAFMVDAYTEDEAPNAKGGVDKRTVLKLDPRLSPVKAAVLPLSRNSDLSPKARDLA 432

Query: 573 NLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
             L+ H  +++ D     I  + R       P  I        + ++ +R   +   Q+V
Sbjct: 433 ARLREH-WNVDFDDAQA-IGKRYRRQDEIGTPFCITVDFDSLEDDAVTVRERDTMAQQRV 490

Query: 633 SLLDAIPIL 641
           S+      L
Sbjct: 491 SIDKVEEYL 499


>gi|294497108|ref|YP_003560808.1| glycyl-tRNA synthetase [Bacillus megaterium QM B1551]
 gi|295702473|ref|YP_003595548.1| glycyl-tRNA synthetase [Bacillus megaterium DSM 319]
 gi|294347045|gb|ADE67374.1| glycyl-tRNA synthetase [Bacillus megaterium QM B1551]
 gi|294800132|gb|ADF37198.1| glycyl-tRNA synthetase [Bacillus megaterium DSM 319]
          Length = 460

 Score = 82.5 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 54/344 (15%), Positives = 105/344 (30%), Gaps = 47/344 (13%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    F +  +S  ++LP  + + G  +RNE +
Sbjct: 149 FNLMFKTHQGVTETSTNEIYLRPETAQGIFVNFKNVQRSMRKKLPFGIGQVGKSFRNEIT 208

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              +   R R F Q +   FC                       G ++  V+L       
Sbjct: 209 PG-NFTFRTREFEQMELEFFCKPGTELEWFNYWKETCNKWLLSLGMKEENVRLRDH---- 263

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
              D L             +  +++          G G  +G       +          
Sbjct: 264 -DDDEL-------------SHYSNATTDFEYKFPFGWGELWG----VASRTDYDLKQHME 305

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK----------- 543
               DF        +     +E+  P  I     G+    +  MI+ ++           
Sbjct: 306 HSGEDFQ-------YVDQETNERYVPYCIE-PSLGADRVTLAYMIDAYEEETLEDGSSRT 357

Query: 544 -GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
              L   L+P +A V  ++      A+ +   L + +  I+ D    +I  + R H    
Sbjct: 358 VMQLHPALAPFKAAVLPLSKKLSNEARAVFEDL-AKYFMIDYDDAG-SIGKRYRRHDEIG 415

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
            P  I        +  + IR   +   ++V++ D +  + +E+ 
Sbjct: 416 TPFCITFDFDSLEDNQVTIRNRDTMEQKRVAISD-LKNIIEEAT 458


>gi|213965838|ref|ZP_03394030.1| glycyl-tRNA synthetase [Corynebacterium amycolatum SK46]
 gi|213951597|gb|EEB62987.1| glycyl-tRNA synthetase [Corynebacterium amycolatum SK46]
          Length = 460

 Score = 82.5 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 50/308 (16%), Positives = 110/308 (35%), Gaps = 20/308 (6%)

Query: 334 FALKPMNCPGHVAVFNHGLKSYR-ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
             ++P    G    F + + + R + P  + + G  +RNE +   + + R R F Q +  
Sbjct: 158 HYMRPETAQGIFVNFKNVMTTARIKPPFGIGQTGKAFRNEITPG-NFIFRTREFEQMEIE 216

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
            F   +Q   +  +  +   + + D G     ++    P++R    A   D E       
Sbjct: 217 YFVAPDQAEEKFDEWVDACWNWFIDLGVNPENMRQFDVPDERAHYSARTIDFEYRFHFQG 276

Query: 453 DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG-TIQVDFNLPSRFNAFYV 511
           +           T   LG    +  K +    D +  +      I+  F L     AF  
Sbjct: 277 NEWGELMGVANRTDYDLGCHIEHS-KEDLRYHDQVTGEKYVPYVIEPSFGLTRALMAFLC 335

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT--SSAVEYAQ 569
           ++++E+  P        G+  R +          L   LSP++  V  ++   +    A+
Sbjct: 336 DAYTEEEVPNAKG----GTDTRTV--------LKLDPRLSPVKVAVLPLSKKDTLTPTAE 383

Query: 570 EIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
            +A+ L+ +  +++ D     I  + R       P  +        + ++ +R   +   
Sbjct: 384 AVADKLRQY-WAVDYDTSGA-IGRRYRRQDEIGTPFCVTVDFDTLEDNAVTVRDRDTMEQ 441

Query: 630 QKVSLLDA 637
           ++V + + 
Sbjct: 442 ERVKIDEL 449


>gi|150014998|ref|YP_001307252.1| glycyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
 gi|254781874|sp|A6LPL6|SYG_CLOB8 RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|149901463|gb|ABR32296.1| glycyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
          Length = 463

 Score = 82.5 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 50/337 (14%), Positives = 108/337 (32%), Gaps = 50/337 (14%)

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEP 373
           + N+        T        L+P    G    F    + S +++P  +A+ G  +RNE 
Sbjct: 151 KFNLMFKTFQGVTEDAKSEMYLRPETAQGIFVNFKAVQRTSRKKVPFGIAQIGKSFRNEI 210

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP 431
           +   +   R R F Q +   FC    +  +++  K +     +  +   E + ++     
Sbjct: 211 TPG-NFTFRTREFEQMELEFFCKPGTDLEWHKYWKDYCWNFLLNLNVKAENLRMRDHGEE 269

Query: 432 EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDW 491
           E    S+A  D                    I      G G  +G   +    D      
Sbjct: 270 ELSFYSNATSD--------------------IEYLFPFGWGELWGIA-DRTDYDLSKHQE 308

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK-------- 543
             G            +  Y++  + + +   +     G+    +  +IE +         
Sbjct: 309 HSGQ-----------DLSYLDQTTNEKYVPYVIEPSLGADRVALAFLIEAYDEEELEGGD 357

Query: 544 ----GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
                +L   L+P +A +  ++    E + +I   L     +++ D    +I  + R   
Sbjct: 358 VRTVMHLHPALAPFKAAILPLSKKLSEKSLDIYAELSKK-FNLDFDETG-SIGKRYRRQD 415

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
               P  I        + S+ IR   +   +++ + +
Sbjct: 416 EIGTPYCITIDFDTLEDESVTIRNRDTMEQERIKISE 452


>gi|227536433|ref|ZP_03966482.1| glycine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300]
 gi|227243809|gb|EEI93824.1| glycine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300]
          Length = 489

 Score = 82.5 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 51/347 (14%), Positives = 108/347 (31%), Gaps = 54/347 (15%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+                 L+P    G    F +  K+   ++P  +A+ G  +RNE  
Sbjct: 167 FNLMFATQMGAMADGAEQVYLRPETAQGIFVNFLNVQKTGRMKIPFGIAQIGKAFRNEVI 226

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
            +   +MR+R F Q +   FC          K     +  +   GF     +        
Sbjct: 227 -ARQFIMRMREFEQMEMQFFCRPGTEMEWYNKWKETRLKWHLALGFNPDNYRYHDH---- 281

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
                             D + + +   ++              F +  K+  G   +  
Sbjct: 282 ------------------DKLAHYANAAVDIEFN----------FPFGFKEVEGIHSRTD 313

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG---------- 544
                    S+    Y ++   + +   +     G    F+ ++  +             
Sbjct: 314 FDLKQHQEFSKKKMQYFDTEINQNYIPYVVETSIGLDRLFLTVLCNSLVQEDLSTDEKQD 373

Query: 545 -----NLPLWLSPIQAIVTTITSSAV--EYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
                  P  L+P++A +  +T      E A+EI   LK    +++ D ++  I  + R 
Sbjct: 374 SRVVLKFPPALAPVKAAILPLTKKDGLPEKAREIMAALK-LDYNVQYDEKDA-IGKRYRR 431

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
                 P  I    +   + ++ IR   +   ++V++ D +  +  E
Sbjct: 432 QDAIGTPFCITVDHQSLEDNTVTIRDRDTMKQERVAIAD-LERIVSE 477


>gi|330686113|gb|EGG97734.1| glycine--tRNA ligase [Staphylococcus epidermidis VCU121]
          Length = 463

 Score = 82.5 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 47/330 (14%), Positives = 99/330 (30%), Gaps = 23/330 (6%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    + +  +S  ++LP  + + G  +RNE +
Sbjct: 151 FNLMFKTFQGVTEDSTNELFLRPETAQGIFVNYKNVQRSMRKKLPFGIGQVGKSFRNEIT 210

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
              + + R R F Q +   FC   E++  +           +K F  + +     +    
Sbjct: 211 PG-NFIFRTREFEQMELEFFCKPGEEIEWQNY---------WKTFASQWLKDLNISEENM 260

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
           R+      + +           K         G+          + ++ LK       + 
Sbjct: 261 RLRDHDADELSHYSNATTDIEYKFPFGWGELWGIAS--------RTDFDLKKHSEHSGED 312

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI 553
                D     ++  + +          +       S E   G   E         L+P 
Sbjct: 313 FKYH-DPETNEKYIPYCIEPSLGADRVTLAFLCDAYSQEGVEGSKDERTVLKFHPALAPY 371

Query: 554 QAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
           +A +  ++      A +I   L     SI+ D   ++I  + R       P  I      
Sbjct: 372 KAAILPLSKKLSSEAIKIFEQLSQS-FSIDFDES-QSIGKRYRRQDEIGTPYCITFDFDS 429

Query: 614 ASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             +  + +R   S    ++ + +    L +
Sbjct: 430 LEDNQVTVRDRDSMEQVRMPISELEAFLAE 459


>gi|313206863|ref|YP_004046040.1| glycyl-tRNA synthetase [Riemerella anatipestifer DSM 15868]
 gi|312446179|gb|ADQ82534.1| glycyl-tRNA synthetase [Riemerella anatipestifer DSM 15868]
 gi|325335699|gb|ADZ11973.1| Glycyl-tRNA synthetase (class II) [Riemerella anatipestifer RA-GD]
          Length = 513

 Score = 82.5 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 61/352 (17%), Positives = 117/352 (33%), Gaps = 55/352 (15%)

Query: 308 SGHWDSYRA-NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH-GLKSYRELPVRLAEF 365
           S +W   R  N+        + ++     L+P    G    F++    S  +LP  +A+ 
Sbjct: 186 SKNWTEVRQFNLMFGTKLGASAENAMELYLRPETAQGIFVNFSNVQKTSRHKLPFGIAQI 245

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKI 423
           G  +RNE   +   + R+R F Q +   F     E  F E  K   L   +    G E  
Sbjct: 246 GKAFRNEIV-ARQFIFRMREFEQMEMQFFVAPGTELSFYEEWKQKRLNWHLALGLGTENY 304

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
                 +                      D      + +   G    EG      F+   
Sbjct: 305 KFHDHEKLAHYAN-------------AAADI-----EFKFPFGFKELEGIHSRTDFDL-- 344

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM----- 538
                  +    +Q     P R          E   P ++  +V G    F+ +      
Sbjct: 345 --TAHEKFSGRKLQYFD--PER---------GESYVPYVVETSV-GLDRMFLAVFSSSLK 390

Query: 539 ---IENFKGNL----PLWLSPIQAIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNE 589
              +E+         P  L+P++A +  +       E+A++I N LK +  ++  + ++ 
Sbjct: 391 EEALEDGSTRTVLSLPPALAPVKAAILPLVKKDGLPEFAEKIFNELK-YDFNVIFEEKD- 448

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           +I  + R       P  I       ++ ++ +R   +   ++VS+ D   I+
Sbjct: 449 SIGKRYRRQDAIGTPFCITVDHDSLNDNTVTLRERDTMKQERVSVEDLRKII 500


>gi|168180987|ref|ZP_02615651.1| glycyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
 gi|226950974|ref|YP_002806065.1| glycyl-tRNA synthetase [Clostridium botulinum A2 str. Kyoto]
 gi|182668133|gb|EDT80112.1| glycyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
 gi|226842596|gb|ACO85262.1| glycine--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
          Length = 463

 Score = 82.5 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 56/349 (16%), Positives = 117/349 (33%), Gaps = 55/349 (15%)

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEP 373
           + N+        T        L+P    G    F +  + S +++P  +A+ G  +RNE 
Sbjct: 151 KFNLMFKTFQGVTEDAKSEIYLRPETAQGIFVNFKNVQRTSRKKVPFGIAQIGKSFRNEI 210

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP 431
           +   +   R R F Q +   FC    +  +    K +     I      E I  +  ++ 
Sbjct: 211 TPG-NFTFRTREFEQMELEFFCKPGTDLEWFNYWKDYCWNFLINLGINKESIRFRDHSQE 269

Query: 432 EKRVGSD--------------ALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           E    S+               LW  A+     +   +++S +D +N  +       Y P
Sbjct: 270 ELSHYSNATSDIEFLFPFGWGELWGVADRTDFDLKKHMEHSGED-LNY-LDPATKERYVP 327

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
              Y ++ ++G D       VD                +  + + +H             
Sbjct: 328 ---YCIEPSLGADRVVLAFLVDAYDEEEL------EGGDVRNVLHLH------------- 365

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
                       L+P +A V  ++    + +QE+ ++L     +I+ D    +I  + R 
Sbjct: 366 ----------PALAPFKAAVLPLSKKLSDKSQEVYSMLSKK-FNIDYDEAG-SIGKRYRR 413

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
                 P  I        + ++ IR   +    +V++ + +    ++ L
Sbjct: 414 EDEIGTPYCITVDFDTLEDNTVTIRDRDTMNQIRVNINE-LEKFIEDKL 461


>gi|240145042|ref|ZP_04743643.1| glycine--tRNA ligase [Roseburia intestinalis L1-82]
 gi|257202867|gb|EEV01152.1| glycine--tRNA ligase [Roseburia intestinalis L1-82]
 gi|291535367|emb|CBL08479.1| glycyl-tRNA synthetase, dimeric type [Roseburia intestinalis M50/1]
 gi|291538177|emb|CBL11288.1| glycyl-tRNA synthetase, dimeric type [Roseburia intestinalis XB6B4]
          Length = 465

 Score = 82.5 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 51/344 (14%), Positives = 107/344 (31%), Gaps = 49/344 (14%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPS 374
            N+        T     T  L+P    G    F +  + S +++P  + + G  +RNE +
Sbjct: 151 FNLMFKTFQGVTEDAKNTVYLRPETAQGIFVNFKNVQRTSRKKIPFGIGQVGKSFRNEIT 210

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              +   R R F Q +   FC                       G ++  ++L       
Sbjct: 211 PG-NFTFRTREFEQMELEFFCEPGTDLEWFQYWRGFCRDWLISLGIKEDEMRLRDHDPAE 269

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           +                     +     I      G G  +G   +    D +GR  +  
Sbjct: 270 L------------------AFYSKGTTDIEFLFPFGWGELWGIA-DRTDYD-LGRHQETS 309

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKG------ 544
                    + F+    +  +E+  P +I     G+    +  +     E   G      
Sbjct: 310 G-----QDLTYFD----DEKNERYLPYVIE-PSLGADRVVLAFLCAAYDEENIGTEEKPD 359

Query: 545 -----NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
                +    L+P++  V  ++    E A+++   L SH  + E D R   I  + R   
Sbjct: 360 MRTVLHFHPALAPVKIGVLPLSKKLNEGAEKVFAQL-SHKYNCEFDDRGN-IGKRYRRQD 417

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
               P  +    +  ++ ++ +R   +   +++ + D      +
Sbjct: 418 EIGTPFCVTYDFESENDGAVTVRDRDTMEQERIKIEDLDAYFAE 461


>gi|312137400|ref|YP_004004737.1| histidyl-tRNA synthetase [Methanothermus fervidus DSM 2088]
 gi|311225119|gb|ADP77975.1| histidyl-tRNA synthetase [Methanothermus fervidus DSM 2088]
          Length = 423

 Score = 82.5 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 68/429 (15%), Positives = 128/429 (29%), Gaps = 71/429 (16%)

Query: 270 RKGWK--------IFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            +G +        + + +   +R   +   Y EI TP      L+               
Sbjct: 6   PRGTRDFLFEDMELRKNVEMKLRNVFERYGYREIKTPIFEHLKLFTIKS------GEEIK 59

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +      K  R  AL+P        ++ + L+ + + P+++  FGS +R E   +    
Sbjct: 60  EQMYHFKDKGGRNLALRPELTAPIARLYVNKLQRFPK-PIKMYYFGSCFRYERPQA---- 114

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            R R F Q    +   K        +   L     K+ G +   + +      R   +  
Sbjct: 115 GRFRQFWQFGCELIGGKSPEAEA--ETIALAYDCLKELGLKNFKIHIGHMGIVRGMLEEN 172

Query: 441 WDDAENI--------------MKGVLDTIKNSSQ-DRINTGVLLGEGAFYGPKFEYILKD 485
               E                +   L+ I   S+   +   ++  +G     K    + D
Sbjct: 173 GVKGEKQDHIMTLIDKGDKEELSRYLNEISFPSELQELLFSLIEMKG---DSKILDEILD 229

Query: 486 AIGRDWQCGTIQVDFNLPSRFNAFYVN-------------------SHSEKCHPVMIHRA 526
            +G       IQ   NL S    F V                             +    
Sbjct: 230 IVGYRRSVEAIQELKNLESLLEVFGVKNYLMDPGIARGLDYYTGIVFEIYISKTQICGGG 289

Query: 527 VFGSIERFIGIMIENFK------------GNLPLWLSPIQAIVTTITSSAVEYAQEIANL 574
            +  IE F G  +E+              GN     S     V  ++    E A +IA  
Sbjct: 290 TYNLIELFGGEKVESTGFAFGFDRLVEAVGNKTEKFSFADVFVAPVSDETREAAFKIAQK 349

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           ++   +S + D     +   +       +   II G KE  ++ + ++   S   ++V +
Sbjct: 350 IRKSGISADVDLSRRKLGKLLSYADHLGVKYTIIVGKKELKQKRVTVKDMESGEQKEVQI 409

Query: 635 LDAIPILTK 643
            D    L +
Sbjct: 410 DDLSDYLRR 418


>gi|328754457|gb|EGF68073.1| glycyl-tRNA synthetase [Propionibacterium acnes HL025PA2]
          Length = 506

 Score = 82.5 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 62/369 (16%), Positives = 117/369 (31%), Gaps = 54/369 (14%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           EE+N P   ++  W +         NM                 L+P    G    F + 
Sbjct: 166 EEVNCPNCGNKGQWTEPR-----DFNMMLKTYLGPVEDKSGLHYLRPETAQGIFVNFQNV 220

Query: 352 LKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
           L S  ++ P  +A+ G  +RNE +   + + R R F Q +   F              ++
Sbjct: 221 LTSARKKPPFGIAQTGKSFRNEITPG-NFIFRTREFEQMEMEFFVEPGTDEEWHQYWIDV 279

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
             + Y D G     ++    P+         +   +  K  +D          + G L G
Sbjct: 280 RTAWYTDLGINPDNLRHYEHPK---------EKLSHYSKRTVDVEYKFGFSGSDWGELEG 330

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
                  + ++ L +      +              +  Y +  + K +   +     G 
Sbjct: 331 IAN----RTDFDLGNHSRHSGK--------------DLSYYDQANNKRYLPYVIEPAAGL 372

Query: 531 IERFIGIM----IENFKGN------------LPLWLSPIQAIVTTIT--SSAVEYAQEIA 572
               +  M     E+   N            L   LSP++A V  ++  S     A+++A
Sbjct: 373 TRSLMAFMVDAYTEDEAPNAKGGVDKRTVLKLDPRLSPVKAAVLPLSRNSDLSPKARDLA 432

Query: 573 NLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
             L+ H  +++ D     I  + R       P  I        + ++ IR   +   Q+V
Sbjct: 433 ARLREH-WNVDFDDAQA-IGKRYRRQDEIGTPFCITVDFDSLEDDAVTIRERDTMAQQRV 490

Query: 633 SLLDAIPIL 641
           S+      L
Sbjct: 491 SIDKVEEYL 499


>gi|118430888|ref|NP_146977.2| misacylated tRNAthr hydrolase [Aeropyrum pernix K1]
 gi|150421685|sp|Q9YFY3|SYT2_AERPE RecName: Full=Probable threonyl-tRNA synthetase 2; AltName:
           Full=Threonine--tRNA ligase 2; Short=ThrRS 2
 gi|116062213|dbj|BAA79028.2| misacylated tRNAthr hydrolase [Aeropyrum pernix K1]
          Length = 421

 Score = 82.5 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 46/104 (44%), Gaps = 1/104 (0%)

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E     L   L+P+Q+ V  + S +  YAQ IA  L +  + +    R   +  ++RE  
Sbjct: 304 EGLTPYLNPTLTPVQSAVIPVDSESEGYAQRIAEDLAASGVRVSI-VRGSGLGRRVREAG 362

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
                ++I+ G +E    ++ +RR      Q+V  LD +    K
Sbjct: 363 RSWASLVIVVGKREEETGTVVVRRRWEPGKQEVLTLDELSSEAK 406


>gi|302528819|ref|ZP_07281161.1| glycyl-tRNA synthetase [Streptomyces sp. AA4]
 gi|302437714|gb|EFL09530.1| glycyl-tRNA synthetase [Streptomyces sp. AA4]
          Length = 468

 Score = 82.5 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 52/346 (15%), Positives = 111/346 (32%), Gaps = 48/346 (13%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPS 374
            NM           +     L+P    G    F +    S ++ P  + + G  +RNE +
Sbjct: 146 FNMMLKTHLGPVETEEGLAYLRPETAQGIFVNFLNVQKASRKKPPFGIGQIGKSFRNEIT 205

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              + + R R F Q +   F              +     YKD G +   ++    P+++
Sbjct: 206 PG-NFIFRTREFEQMEMEFFVEPGDDEQWHQYWIDARTDWYKDLGIKPENLRHFEHPKEK 264

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           +        +    + V    +         G L G            + +    D    
Sbjct: 265 L--------SHYAKRTVDIEYRFEFNAGQEWGELEG------------IANRTDFDLTTH 304

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK----------- 543
           +     +L      F+  +  ++  P +I     G     +  +I+ +            
Sbjct: 305 SNHSGVDLS-----FFDQASGQRYRPFVIE-PAAGVGRSMMAFLIDAYDEEEVPNAKGGT 358

Query: 544 -----GNLPLWLSPIQAIVTTITSSAV--EYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                 +L   L+P +A V  ++ +A     A+++A  L+ H  +++ D   + I  + R
Sbjct: 359 DKRTVLHLDPRLAPFKAAVLPLSRNADLSPKARDLAARLRKH-WNVDFDD-AQAIGRRYR 416

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
                  P  +        + ++ IR   S   +++S+      L 
Sbjct: 417 RQDEIGTPYCVTVDFDTLEDDAVTIRERDSMKQERISIDQVESYLA 462


>gi|291514571|emb|CBK63781.1| glycyl-tRNA synthetase [Alistipes shahii WAL 8301]
          Length = 514

 Score = 82.5 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 54/347 (15%), Positives = 112/347 (32%), Gaps = 54/347 (15%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T +   T  L+P    G    F +  K+   ++P  +A+ G  +RNE  
Sbjct: 194 FNLMFSTQMGSTAEGANTIYLRPETAQGIFVNFLNVQKTGRMKIPFGIAQIGKAFRNEIV 253

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
            +   + R+R F Q +   F     E  +    K   +       FG +        +  
Sbjct: 254 -ARQFIFRMREFEQMEMQFFVRPGTEMKWWNEWKNTRMAWHRALGFGDDDYRFHDHDKLA 312

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
                    + A +I            +     G    EG      F+        + + 
Sbjct: 313 HYA------NAATDI------------EYNFPFGFKEVEGIHSRTDFDL----GSHQKFS 350

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM--------IENFK- 543
              +Q                  E   P ++  ++ G    F+ +M        +E    
Sbjct: 351 GKKLQYFD-----------PETGESYVPYVVETSI-GVDRMFLQVMSAAYTEQTLEGGDS 398

Query: 544 ---GNLPLWLSPIQAIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
                 P  L+P++  V  +       E AQ+I +LLK +  ++  D ++ ++  + R  
Sbjct: 399 RVVLKFPPALAPVKVAVLPLVKKDGMPEVAQKIVDLLK-YDYNVVYDEKD-SVGKRYRRQ 456

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
                P  +    +   + ++ IR   +   ++V +     ++ +E 
Sbjct: 457 DAVGTPFCVTVDGQTLEDGTVTIRHRDTMAQERVKIESLHAMVDEEC 503


>gi|138897004|ref|YP_001127457.1| glycyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
 gi|166227934|sp|A4ITQ8|SYG_GEOTN RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|134268517|gb|ABO68712.1| Glycyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
          Length = 466

 Score = 82.5 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 54/341 (15%), Positives = 103/341 (30%), Gaps = 46/341 (13%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    F +  ++  ++LP  +A+ G  +RNE +
Sbjct: 155 FNLMFKTYQGVTESSANEIYLRPETAQGIFVNFKNVQRTMRKKLPFGIAQIGKSFRNEIT 214

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              +   R R F Q +   FC   +                   G  +  ++L       
Sbjct: 215 PG-NFTFRTREFEQMELEFFCKPGEELKWFDYWKQFCKEWLLSLGMNEEHIRLRDHT--- 270

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
                         K  L    N++ D I      G G  +G       +          
Sbjct: 271 --------------KEELSHYSNATTD-IEYQFPFGWGELWG----IASRTDYDLKQHME 311

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK----------- 543
               DF+             +E+  P  I     G+    +  MI+ +            
Sbjct: 312 HSGEDFHYLD-------QETNERYIPYCIE-PSLGADRVTLAFMIDAYDEEELEDGTTRT 363

Query: 544 -GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
             +L   L+P +A V  ++    + A+ I   L + H  ++ D    +I  + R      
Sbjct: 364 VMHLHPALAPYKAAVLPLSKKLGDGARRIYEEL-AKHFMVDYDETG-SIGKRYRRQDEIG 421

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            P  I    +   +  + +R   +    ++ + +    L K
Sbjct: 422 TPFCITYDFESEQDGQVTVRDRDTMEQVRLPIGELKAFLDK 462


>gi|160878806|ref|YP_001557774.1| glycyl-tRNA synthetase [Clostridium phytofermentans ISDg]
 gi|189082277|sp|A9KJ36|SYG_CLOPH RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|160427472|gb|ABX41035.1| glycyl-tRNA synthetase [Clostridium phytofermentans ISDg]
          Length = 462

 Score = 82.5 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 50/341 (14%), Positives = 112/341 (32%), Gaps = 46/341 (13%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPS 374
            N+        T     T  L+P    G    F +  + S +++P  + + G  +RNE +
Sbjct: 151 FNLMFKTFQGVTEDAKNTVYLRPETAQGIFVNFKNVQRTSRKKIPFGIGQVGKSFRNEIT 210

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              +   R R F Q +   FC  +             I   +  G ++  +++    ++ 
Sbjct: 211 PG-NFTFRTREFEQMELEFFCEPDTDLEWFAYWKQFCIDWLQTLGIKEDEMRVRDHEKEE 269

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           +   + +  A + +   L          I                      A   D+   
Sbjct: 270 L---SFYSKATSDI-EFLFPFGWGELWGI----------------------ADRTDYDLT 303

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI------ENFKGNLPL 548
             Q   N+     +++ +   ++  P +I     G+    +  +       E  +G++  
Sbjct: 304 QHQ---NVSKEDLSYFDDEKGQRYIPYVIE-PSLGADRVTLAFLCAAYDEEEIAEGDVRT 359

Query: 549 WL------SPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            L      +P++  V  ++    E A++I   L  +  + E D R   I  + R      
Sbjct: 360 VLHFHPAIAPVKIGVLPLSKKLSENAEKIYTDLSKY-YNCEFDDRGN-IGKRYRRQDEIG 417

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            P  I       ++ ++ +R   +   +++ + D      K
Sbjct: 418 TPFCITYDFDSETDGAVTVRDRDTMEQERIKIEDLKAYFEK 458


>gi|50842433|ref|YP_055660.1| glycyl-tRNA synthetase [Propionibacterium acnes KPA171202]
 gi|50840035|gb|AAT82702.1| glycyl-tRNA synthetase [Propionibacterium acnes KPA171202]
 gi|313764544|gb|EFS35908.1| glycyl-tRNA synthetase [Propionibacterium acnes HL013PA1]
 gi|313772417|gb|EFS38383.1| glycyl-tRNA synthetase [Propionibacterium acnes HL074PA1]
 gi|313792233|gb|EFS40334.1| glycyl-tRNA synthetase [Propionibacterium acnes HL110PA1]
 gi|313801818|gb|EFS43052.1| glycyl-tRNA synthetase [Propionibacterium acnes HL110PA2]
 gi|313807427|gb|EFS45914.1| glycyl-tRNA synthetase [Propionibacterium acnes HL087PA2]
 gi|313809935|gb|EFS47656.1| glycyl-tRNA synthetase [Propionibacterium acnes HL083PA1]
 gi|313813027|gb|EFS50741.1| glycyl-tRNA synthetase [Propionibacterium acnes HL025PA1]
 gi|313816086|gb|EFS53800.1| glycyl-tRNA synthetase [Propionibacterium acnes HL059PA1]
 gi|313818473|gb|EFS56187.1| glycyl-tRNA synthetase [Propionibacterium acnes HL046PA2]
 gi|313820236|gb|EFS57950.1| glycyl-tRNA synthetase [Propionibacterium acnes HL036PA1]
 gi|313822955|gb|EFS60669.1| glycyl-tRNA synthetase [Propionibacterium acnes HL036PA2]
 gi|313825117|gb|EFS62831.1| glycyl-tRNA synthetase [Propionibacterium acnes HL063PA1]
 gi|313827686|gb|EFS65400.1| glycyl-tRNA synthetase [Propionibacterium acnes HL063PA2]
 gi|313830266|gb|EFS67980.1| glycyl-tRNA synthetase [Propionibacterium acnes HL007PA1]
 gi|313834067|gb|EFS71781.1| glycyl-tRNA synthetase [Propionibacterium acnes HL056PA1]
 gi|314915540|gb|EFS79371.1| glycyl-tRNA synthetase [Propionibacterium acnes HL005PA4]
 gi|314918337|gb|EFS82168.1| glycyl-tRNA synthetase [Propionibacterium acnes HL050PA1]
 gi|314919992|gb|EFS83823.1| glycyl-tRNA synthetase [Propionibacterium acnes HL050PA3]
 gi|314925297|gb|EFS89128.1| glycyl-tRNA synthetase [Propionibacterium acnes HL036PA3]
 gi|314932005|gb|EFS95836.1| glycyl-tRNA synthetase [Propionibacterium acnes HL067PA1]
 gi|314955874|gb|EFT00274.1| glycyl-tRNA synthetase [Propionibacterium acnes HL027PA1]
 gi|314958355|gb|EFT02458.1| glycyl-tRNA synthetase [Propionibacterium acnes HL002PA1]
 gi|314960090|gb|EFT04192.1| glycyl-tRNA synthetase [Propionibacterium acnes HL002PA2]
 gi|314962891|gb|EFT06991.1| glycyl-tRNA synthetase [Propionibacterium acnes HL082PA1]
 gi|314968031|gb|EFT12130.1| glycyl-tRNA synthetase [Propionibacterium acnes HL037PA1]
 gi|314973272|gb|EFT17368.1| glycyl-tRNA synthetase [Propionibacterium acnes HL053PA1]
 gi|314975947|gb|EFT20042.1| glycyl-tRNA synthetase [Propionibacterium acnes HL045PA1]
 gi|314978296|gb|EFT22390.1| glycyl-tRNA synthetase [Propionibacterium acnes HL072PA2]
 gi|314984034|gb|EFT28126.1| glycyl-tRNA synthetase [Propionibacterium acnes HL005PA1]
 gi|314987797|gb|EFT31888.1| glycyl-tRNA synthetase [Propionibacterium acnes HL005PA2]
 gi|314990019|gb|EFT34110.1| glycyl-tRNA synthetase [Propionibacterium acnes HL005PA3]
 gi|315078106|gb|EFT50157.1| glycyl-tRNA synthetase [Propionibacterium acnes HL053PA2]
 gi|315080736|gb|EFT52712.1| glycyl-tRNA synthetase [Propionibacterium acnes HL078PA1]
 gi|315084406|gb|EFT56382.1| glycyl-tRNA synthetase [Propionibacterium acnes HL027PA2]
 gi|315085746|gb|EFT57722.1| glycyl-tRNA synthetase [Propionibacterium acnes HL002PA3]
 gi|315088836|gb|EFT60812.1| glycyl-tRNA synthetase [Propionibacterium acnes HL072PA1]
 gi|315096185|gb|EFT68161.1| glycyl-tRNA synthetase [Propionibacterium acnes HL038PA1]
 gi|315098446|gb|EFT70422.1| glycyl-tRNA synthetase [Propionibacterium acnes HL059PA2]
 gi|315101196|gb|EFT73172.1| glycyl-tRNA synthetase [Propionibacterium acnes HL046PA1]
 gi|315105473|gb|EFT77449.1| glycyl-tRNA synthetase [Propionibacterium acnes HL030PA1]
 gi|315108418|gb|EFT80394.1| glycyl-tRNA synthetase [Propionibacterium acnes HL030PA2]
 gi|327326101|gb|EGE67891.1| glycine--tRNA ligase [Propionibacterium acnes HL096PA2]
 gi|327332028|gb|EGE73765.1| glycine--tRNA ligase [Propionibacterium acnes HL096PA3]
 gi|327443231|gb|EGE89885.1| glycyl-tRNA synthetase [Propionibacterium acnes HL013PA2]
 gi|327446016|gb|EGE92670.1| glycyl-tRNA synthetase [Propionibacterium acnes HL043PA2]
 gi|327448005|gb|EGE94659.1| glycyl-tRNA synthetase [Propionibacterium acnes HL043PA1]
 gi|327450871|gb|EGE97525.1| glycyl-tRNA synthetase [Propionibacterium acnes HL087PA3]
 gi|327453052|gb|EGE99706.1| glycyl-tRNA synthetase [Propionibacterium acnes HL092PA1]
 gi|327453781|gb|EGF00436.1| glycyl-tRNA synthetase [Propionibacterium acnes HL083PA2]
 gi|328753558|gb|EGF67174.1| glycyl-tRNA synthetase [Propionibacterium acnes HL020PA1]
 gi|328754290|gb|EGF67906.1| glycyl-tRNA synthetase [Propionibacterium acnes HL087PA1]
 gi|328760397|gb|EGF73965.1| glycine--tRNA ligase [Propionibacterium acnes HL099PA1]
 gi|332675345|gb|AEE72161.1| glycine--tRNA ligase [Propionibacterium acnes 266]
          Length = 506

 Score = 82.1 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 62/369 (16%), Positives = 117/369 (31%), Gaps = 54/369 (14%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           EE+N P   ++  W +         NM                 L+P    G    F + 
Sbjct: 166 EEVNCPNCGNKGQWTEPR-----DFNMMLKTYLGPVEDKSGLHYLRPETAQGIFVNFQNV 220

Query: 352 LKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
           L S  ++ P  +A+ G  +RNE +   + + R R F Q +   F              ++
Sbjct: 221 LTSARKKPPFGIAQTGKSFRNEITPG-NFIFRTREFEQMEMEFFVEPGTDEEWHQYWIDV 279

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
             + Y D G     ++    P+         +   +  K  +D          + G L G
Sbjct: 280 RTAWYTDLGINPDNLRHYEHPK---------EKLSHYSKRTVDVEYKFGFSGSDWGELEG 330

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
                  + ++ L +      +              +  Y +  + K +   +     G 
Sbjct: 331 IAN----RTDFDLGNHSRHSGK--------------DLSYYDQANNKRYLPYVIEPAAGL 372

Query: 531 IERFIGIM----IENFKGN------------LPLWLSPIQAIVTTIT--SSAVEYAQEIA 572
               +  M     E+   N            L   LSP++A V  ++  S     A+++A
Sbjct: 373 TRSLMAFMVDAYTEDEAPNAKGGVDKRTVLKLDPRLSPVKAAVLPLSRNSDLSPKARDLA 432

Query: 573 NLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
             L+ H  +++ D     I  + R       P  I        + ++ IR   +   Q+V
Sbjct: 433 ARLREH-WNVDFDDAQA-IGKRYRRQDEIGTPFCITVDFDSLEDDAVTIRERDTMAQQRV 490

Query: 633 SLLDAIPIL 641
           S+      L
Sbjct: 491 SIDKVEEYL 499


>gi|302670581|ref|YP_003830541.1| glycyl-tRNA synthetase GlyS [Butyrivibrio proteoclasticus B316]
 gi|302395054|gb|ADL33959.1| glycyl-tRNA synthetase GlyS [Butyrivibrio proteoclasticus B316]
          Length = 469

 Score = 82.1 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 51/382 (13%), Positives = 113/382 (29%), Gaps = 48/382 (12%)

Query: 278 TLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALK 337
           TL + +     ++ E       +      +         N+        T     T  L+
Sbjct: 116 TLETSVDGWSHEEMENFIKEHSVPCPSCGKHNFTGIREFNLMFKTFQGVTEDAKDTVYLR 175

Query: 338 PMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT 396
           P    G    F +  + S +++P  + + G  +RNE +   +   R R F Q +   FC 
Sbjct: 176 PETAQGIFVNFKNVQRTSRKKVPFGICQIGKSFRNEITPG-NFTFRTREFEQMELEFFCK 234

Query: 397 KEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIK 456
                                 G +K  ++L     + +   + + D    ++       
Sbjct: 235 PGTQTEWFEYWRKTCYEWLLSLGIKKENLRLRDHDPEEL---SFYSDHTTDIEYAFPFTD 291

Query: 457 NSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE 516
                 I                      A   D+     Q     P     ++ +  +E
Sbjct: 292 WGELWGI----------------------ASRTDYDLTRHQETSGQP---MDYFDDETNE 326

Query: 517 KCHPVMIHRAVFGSIERFIGIMIENFK---------------GNLPLWLSPIQAIVTTIT 561
           K  P ++     G+    +  + E +                 +    L+P++  +  ++
Sbjct: 327 KYIPYVVE-PSLGADRVTLAFLCEAYDEENIGTEEKPDMRTVLHFHPALAPVKIGILPLS 385

Query: 562 SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
               E A++I   L     + E D R   I  + R       P  I    +  ++  + +
Sbjct: 386 KKLNEGAEKIYAKLSKK-YNCEFDDRGN-IGKRYRRQDEIGTPFCITYDFESENDNMVTV 443

Query: 622 RRFGSTTTQKVSLLDAIPILTK 643
           R   S   +++++ +     + 
Sbjct: 444 RFRDSMEQERIAIDELEAFFSD 465


>gi|313838644|gb|EFS76358.1| glycyl-tRNA synthetase [Propionibacterium acnes HL086PA1]
          Length = 506

 Score = 82.1 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 62/369 (16%), Positives = 117/369 (31%), Gaps = 54/369 (14%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           EE+N P   ++  W +         NM                 L+P    G    F + 
Sbjct: 166 EEVNCPNCGNKGQWTEPR-----DFNMMLKTYLGPVEDKSGLHYLRPETAQGIFVNFQNV 220

Query: 352 LKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
           L S  ++ P  +A+ G  +RNE +   + + R R F Q +   F              ++
Sbjct: 221 LTSARKKPPFGIAQTGKSFRNEITPG-NFIFRTREFEQMEMEFFVEPGTDEEWHQYWIDV 279

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
             + Y D G     ++    P+         +   +  K  +D          + G L G
Sbjct: 280 RTAWYTDLGINPDNLRHYEHPK---------EKLSHYSKRTVDVEYKFGFSGSDWGELEG 330

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
                  + ++ L +      +              +  Y +  + K +   +     G 
Sbjct: 331 IAN----RTDFDLGNHSRHSGK--------------DLSYYDQANNKRYLPYVIEPAAGL 372

Query: 531 IERFIGIM----IENFKGN------------LPLWLSPIQAIVTTIT--SSAVEYAQEIA 572
               +  M     E+   N            L   LSP++A V  ++  S     A+++A
Sbjct: 373 TRSLMAFMVDAYTEDEAPNAKGGVDKRTVVKLDPRLSPVKAAVLPLSRNSDLSPKARDLA 432

Query: 573 NLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
             L+ H  +++ D     I  + R       P  I        + ++ IR   +   Q+V
Sbjct: 433 ARLREH-WNVDFDDAQA-IGKRYRRQDEIGTPFCITVDFDSLEDDAVTIRERDTMAQQRV 490

Query: 633 SLLDAIPIL 641
           S+      L
Sbjct: 491 SIDKVEEYL 499


>gi|91215382|ref|ZP_01252353.1| glycyl-tRNA synthetase [Psychroflexus torquis ATCC 700755]
 gi|91186334|gb|EAS72706.1| glycyl-tRNA synthetase [Psychroflexus torquis ATCC 700755]
          Length = 512

 Score = 82.1 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 61/343 (17%), Positives = 114/343 (33%), Gaps = 31/343 (9%)

Query: 308 SGHWDSYRA-NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR-ELPVRLAEF 365
           S  W   R  N+        + +      L+P    G    F +  KS R ++P  +A+ 
Sbjct: 186 SRDWTKVRQFNLMFGTKLGASAESATDLYLRPETAQGIFVNFANVQKSGRLKIPFGIAQI 245

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKI 423
           G  +RNE   +   + R R F Q +   F     E  + E  K+         + G E  
Sbjct: 246 GKAFRNEIV-ARQFIFRQREFEQMEMQYFVRPGEELKWFEHWKVLRTKWHQSLNLGEENY 304

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
                 +      +    +         L+ I + +   +     L      G K ++  
Sbjct: 305 RFHDHEKMAHYANAATDIEFNFPFGFKELEGIHSRTDFDLKAHENLS-----GKKLQF-F 358

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
              +G ++    I+    L   F A + ++  E+       R V                
Sbjct: 359 DPELGENYVPYVIETSIGLDRMFLAVFSSALQEETLKDGSSRTVL--------------- 403

Query: 544 GNLPLWLSPIQAIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             LP  L+P++A V  +       E A+E+   L+    ++  D ++  +  + R     
Sbjct: 404 -KLPSILAPVKAAVFPLLKKDGLPEIAKELLKELQ-WDFNVVYDEKDA-VGRRYRRQDAA 460

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
             P  I        +  + IR   +   Q+V + +   I+ KE
Sbjct: 461 GTPFCITVDHDTKEDHCVTIRHRDTMEQQRVPMSEVKAIIQKE 503


>gi|229584291|ref|YP_002842792.1| glycyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
 gi|228019340|gb|ACP54747.1| glycyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
          Length = 484

 Score = 82.1 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 70/440 (15%), Positives = 145/440 (32%), Gaps = 74/440 (16%)

Query: 268 WHRKGWKIFQTLIS----YMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKC 323
           W   G  + Q +I     +  +KI + +  ++   +L   +++ SGH  ++   +     
Sbjct: 46  WLPPGAMLRQKIIDSWINFFIKKIPNIFL-MDGSTILPLSVFEASGHLANFTDPVIKCPK 104

Query: 324 ADDTIK----------------------------------------DLRTFALKPMNCPG 343
             +T +                                        D    AL+P     
Sbjct: 105 CSNTYRVDHLLKETNGKLICPRDLTDLKDQEIKQKSLMLELTVGLADEINAALRPETAQN 164

Query: 344 HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE 403
               F +      +LP  +A+ G  YRNE S       R+R F Q +   F         
Sbjct: 165 IYINFMNFKAIGLKLPFAIAQIGRSYRNEISPR---GSRLREFVQMEIEEFVLP--FHLN 219

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG-----SDALWDDAENIMKGVLDTIKNS 458
              +++ +  I     +E+  +K+      + G       A W   E   + + + +   
Sbjct: 220 SHPLYDNVKGIRLPIFYEEQTIKMELNEAVKKGLVPNIRLAFWIGREW--QWLTNELGLP 277

Query: 459 SQDRINTGVLLGEGAFY---GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS 515
                   V   E AFY       E  ++D    +      + D++L         N   
Sbjct: 278 GNKIRFRIVPSEERAFYSKGTVDVEVNMEDDW-VEIIGNAYRTDYDLTVHSKHSGANLSE 336

Query: 516 EKCHPVMIHRAVFGSIERFIGIMIENFKGN----------LPLWLSPIQAIVTTI--TSS 563
               P +I    FG     I +++ N+  N          +P  ++P++  + +I  +  
Sbjct: 337 NGTIPHVIE-PSFGLDRIAIAVLLLNYDPNPSDRNWPLFRIPYKIAPLEIGIASIHHSDE 395

Query: 564 AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRR 623
            +  A+++  +L+S        F    I+ +  +     IP++I    K   E ++ IR 
Sbjct: 396 YINIAEKVDLILRSLDYVTFKLFERGKIDAQYAKADTLGIPLVITIDSKTLEENTVTIRN 455

Query: 624 FGSTTTQKVSLLDAIPILTK 643
             +    +V++ +    +  
Sbjct: 456 RDTKAQIRVNIGEIAQAVKN 475


>gi|313903917|ref|ZP_07837297.1| phosphoribulokinase/uridine kinase [Eubacterium cellulosolvens 6]
 gi|313471066|gb|EFR66388.1| phosphoribulokinase/uridine kinase [Eubacterium cellulosolvens 6]
          Length = 556

 Score = 82.1 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 49/252 (19%), Positives = 90/252 (35%), Gaps = 8/252 (3%)

Query: 1   MPSDI-KLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLS-DPVREGS 58
           M  ++  +   D +I+  P   T  ++            + +  +G + +L      +  
Sbjct: 1   MSDELLTIRLDDETIR-VPKGTTFREIIGDRKGKNGLDILLLTNDGVLAELHKTAENDCV 59

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEV---QVAIGPIIEDGFYYDFDKEQPFS 115
           ++ IT  D   +   R S   +  +AV  +  +     V++     +G+YY  +K     
Sbjct: 60  LKSITAADRIGMDTYRRSMNLLFLKAVYDVAGKGVTPHVSLLFSNSNGYYYTIEKIGREV 119

Query: 116 SDELAQ-IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
              LA+ I+++M E++ R  PFLK   S   ARE F       K E L        V +Y
Sbjct: 120 DASLAESIKERMLELVERKQPFLKTQQSTRTAREFFHQVGMYDK-ERLFRYRRVSMVNMY 178

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
           +  ++ D   G  V  TG +K F       G                   ++   E+ Q 
Sbjct: 179 QVEKFKDYNYGYMVGDTGVLKYFDVTAYAEGIVLVLPKASNPTVVEPFKPFSKIFEVQQE 238

Query: 235 LYFLEESEKRDH 246
                +    + 
Sbjct: 239 SEKWADKLGINC 250


>gi|311273539|ref|XP_003133915.1| PREDICTED: threonyl-tRNA synthetase, cytoplasmic-like [Sus scrofa]
          Length = 77

 Score = 82.1 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 31/64 (48%), Gaps = 1/64 (1%)

Query: 581 SIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
            ++ D     T+N KIR   + +   I++ G+KE S  ++ IR   +    + ++ + + 
Sbjct: 1   MVDIDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKSSGTVNIRTRDNKVHGERTISETVG 60

Query: 640 ILTK 643
            L +
Sbjct: 61  RLEQ 64


>gi|256825028|ref|YP_003148988.1| glycyl-tRNA synthetase [Kytococcus sedentarius DSM 20547]
 gi|256688421|gb|ACV06223.1| glycyl-tRNA synthetase [Kytococcus sedentarius DSM 20547]
          Length = 468

 Score = 82.1 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 53/331 (16%), Positives = 105/331 (31%), Gaps = 51/331 (15%)

Query: 327 TIKDLRTFALKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRG 385
           T  +     L+P    G    F +    S ++ P  +A+ G  +RNE +   + + R R 
Sbjct: 158 TEDESGKHYLRPETAQGIFTQFANVMTTSRKKPPFGIAQVGKSFRNEITPG-NFIFRTRE 216

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
           F Q +   F    +      +   +    + D G     ++    PE             
Sbjct: 217 FEQMELEYFVAPAEAPKYFDEWLEVCEKWFLDLGITPENIRRYEHPE------------- 263

Query: 446 NIMKGVLDTIKNSSQDRINTGVLLGE-GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPS 504
                  D + + S   I+     G  G+ +G       +              D     
Sbjct: 264 -------DKLSHYSDRTIDLEYRFGFSGSEFGELMGVANRTDFDLSVHAEASGQDL---- 312

Query: 505 RFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGN------------LPL 548
              +++  +  E+  P +I    FG     +  +I    E+   N            L  
Sbjct: 313 ---SYFNQATGERYVPYVIE-PAFGLTRALMAFLIDAYTEDEAPNAKGGMDKRVVLKLDP 368

Query: 549 WLSPIQAIVTTIT--SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPII 606
            L+P++  V  ++        A+E+A  L+ +   ++ D     I  + R       P  
Sbjct: 369 RLAPVKVAVLPLSRNEELSPKARELAAQLRQY-WDVDFDDSQA-IGKRYRRQDEIGTPFC 426

Query: 607 IICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
           I        + ++ IR   + + ++V L   
Sbjct: 427 ITVDFDTLEDDAVTIRERDTMSQERVPLDQV 457


>gi|194385006|dbj|BAG60915.1| unnamed protein product [Homo sapiens]
          Length = 169

 Score = 82.1 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 2/72 (2%)

Query: 2   PSDIKLTFPDG-SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSI 59
           P  IK++ P G  I     + T   +A  IS +LA  AVA  +NG+  DL  P+  +  +
Sbjct: 58  PRTIKISLPGGQKIDAVAWNTTPYQLARQISSTLADTAVAAQVNGEPYDLERPLETDSDL 117

Query: 60  EIITPEDPRSLA 71
             +T + P   A
Sbjct: 118 RFLTFDSPEGKA 129


>gi|253752458|ref|YP_003025599.1| seryl-tRNA synthetase [Streptococcus suis SC84]
 gi|253754284|ref|YP_003027425.1| seryl-tRNA synthetase [Streptococcus suis P1/7]
 gi|56684577|gb|AAW21989.1| SerS [Streptococcus suis]
 gi|251816747|emb|CAZ52389.1| seryl-tRNA synthetase [Streptococcus suis SC84]
 gi|251820530|emb|CAR47285.1| seryl-tRNA synthetase [Streptococcus suis P1/7]
 gi|319758862|gb|ADV70804.1| hypothetical protein SSUJS14_1746 [Streptococcus suis JS14]
          Length = 424

 Score = 82.1 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 39/222 (17%), Positives = 86/222 (38%), Gaps = 20/222 (9%)

Query: 242 EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINT 296
           E + H  L  ++D+          G+  +F+   G ++ + L ++M    I + Y+EI T
Sbjct: 136 EPKAHWDLGEDLDILDWERGAKVTGARFLFYKNLGARLERALYNFMLDEHIAEGYQEIIT 195

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +++      +G +  ++ + F +   +        F L P         + + +   +
Sbjct: 196 PYMVNHDSMFGTGQYPKFKEDTFELADTN--------FVLIPTAEVPLTNYYRNEILEEK 247

Query: 357 ELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           +LP+        +R+E   +     GL+R+  F + +   F T EQ ++E  K+     +
Sbjct: 248 DLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFATPEQSYDELEKMTANAEN 307

Query: 414 IYKDFGFEKI----MVKLSTRPEKRVGSDALWDDAENIMKGV 451
           I +  G                  +     +W  A+N  + +
Sbjct: 308 ILQKLGLPYRVLALCTGDMGFSAAKTYDLEVWIPAQNAYREI 349


>gi|223934048|ref|ZP_03626000.1| seryl-tRNA synthetase [Streptococcus suis 89/1591]
 gi|223897275|gb|EEF63684.1| seryl-tRNA synthetase [Streptococcus suis 89/1591]
          Length = 424

 Score = 82.1 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 39/222 (17%), Positives = 86/222 (38%), Gaps = 20/222 (9%)

Query: 242 EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINT 296
           E + H  L  ++D+          G+  +F+   G ++ + L ++M    I + Y+EI T
Sbjct: 136 EPKAHWDLGEDLDILDWERGAKVTGARFLFYKNLGARLERALYNFMLDEHIAEGYQEIIT 195

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +++      +G +  ++ + F +   +        F L P         + + +   +
Sbjct: 196 PYMVNHDSMFGTGQYPKFKEDTFELADTN--------FVLIPTAEVPLTNYYRNEILEEK 247

Query: 357 ELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           +LP+        +R+E   +     GL+R+  F + +   F T EQ ++E  K+     +
Sbjct: 248 DLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFATPEQSYDELEKMTANAEN 307

Query: 414 IYKDFGFEKI----MVKLSTRPEKRVGSDALWDDAENIMKGV 451
           I +  G                  +     +W  A+N  + +
Sbjct: 308 ILQKLGLPYRVLALCTGDMGFSAAKTYDLEVWIPAQNAYREI 349


>gi|255282516|ref|ZP_05347071.1| glycine--tRNA ligase [Bryantella formatexigens DSM 14469]
 gi|255266809|gb|EET60014.1| glycine--tRNA ligase [Bryantella formatexigens DSM 14469]
          Length = 465

 Score = 82.1 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 49/338 (14%), Positives = 105/338 (31%), Gaps = 49/338 (14%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPS 374
            N+        T     T  L+P    G    F +  + S +++P  + + G  +RNE +
Sbjct: 151 FNLMFKTFQGVTEDAKNTVYLRPETAQGIFVNFKNVQRTSRKKIPFGIGQIGKSFRNEIT 210

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              +   R R F Q +   FC  +             +    + G +   V+     ++ 
Sbjct: 211 PG-NFTFRTREFEQMELEFFCEPDTDLEWFAYWKQFCLDWLHNLGLKDDEVRYRDHEKEE 269

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           +   + +  A   +   L          I                      A   D+   
Sbjct: 270 L---SFYSKATTDV-EFLFPFGWGELWGI----------------------ADRTDYDLT 303

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKG------ 544
             Q   N+  +   ++ +  + K  P +I     G+    +  +     E   G      
Sbjct: 304 QHQ---NVSGQDLTYFDDQKNWKYVPYVIE-PSLGADRMVLAFLCSAYDEENIGTEEKPD 359

Query: 545 -----NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
                +    L+P++  V  ++    E A++I   L     + E D R   I  + R   
Sbjct: 360 MRTVLHFHPVLAPVKIGVLPLSKKLNEGAEKIFAQLSKK-YNCEFDDRGN-IGKRYRRQD 417

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
               P  +    +  ++ ++ +R   +    +V + + 
Sbjct: 418 EIGTPFCVTYDFESETDGAVTVRDRDTMEQVRVKIDEL 455


>gi|251810982|ref|ZP_04825455.1| glycyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
 gi|282876009|ref|ZP_06284876.1| glycine--tRNA ligase [Staphylococcus epidermidis SK135]
 gi|251805492|gb|EES58149.1| glycyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
 gi|281295034|gb|EFA87561.1| glycine--tRNA ligase [Staphylococcus epidermidis SK135]
          Length = 463

 Score = 82.1 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 51/343 (14%), Positives = 106/343 (30%), Gaps = 49/343 (14%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    + +  +S  ++LP  + + G  +RNE +
Sbjct: 151 FNLMFKTFQGVTEDSTNELFLRPETAQGIFVNYKNVQRSMRKKLPFGIGQIGKSFRNEIT 210

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
              + + R R F Q +   FC   E++  +           +K F  E +     +    
Sbjct: 211 PG-NFIFRTREFEQMELEFFCKPGEEIEWQNY---------WKTFASEWLTDLNISEDNM 260

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
           R+      + +           K         G+          + +Y L+         
Sbjct: 261 RLRDHDEDELSHYSNATTDIEYKFPFGWGELWGIAS--------RTDYDLR--------- 303

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK---------- 543
              Q   +    F  ++    +EK  P  I     G+    +  + + +           
Sbjct: 304 ---QHSEHSGEDFK-YHDPETNEKYIPYCIE-PSLGADRVTLAFLCDAYAEEGVEGSKDA 358

Query: 544 ---GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
               +    L+P +A V  ++      A +I   L S   +I+ D   ++I  + R    
Sbjct: 359 RTVMHFHPALAPYKAAVLPLSKKLSSEAIKIFEQLSSS-FAIDFDES-QSIGKRYRRQDE 416

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              P  I        +  + +R   S    ++ + +    L +
Sbjct: 417 IGTPYCITFDFDSLEDNQVTVRDRDSMEQVRMPISELETFLAE 459


>gi|27468170|ref|NP_764807.1| glycyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
 gi|57867007|ref|YP_188708.1| glycyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|293366474|ref|ZP_06613151.1| glycine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|38258360|sp|Q8CSD5|SYG_STAES RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|71153561|sp|Q5HNY2|SYG_STAEQ RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|27315716|gb|AAO04851.1|AE016748_85 glycyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
 gi|57637665|gb|AAW54453.1| glycyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|291319243|gb|EFE59612.1| glycine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|329735209|gb|EGG71501.1| glycine--tRNA ligase [Staphylococcus epidermidis VCU045]
 gi|329737405|gb|EGG73659.1| glycine--tRNA ligase [Staphylococcus epidermidis VCU028]
          Length = 463

 Score = 82.1 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 51/343 (14%), Positives = 106/343 (30%), Gaps = 49/343 (14%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    + +  +S  ++LP  + + G  +RNE +
Sbjct: 151 FNLMFKTFQGVTEDSTNELFLRPETAQGIFVNYKNVQRSMRKKLPFGIGQIGKSFRNEIT 210

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
              + + R R F Q +   FC   E++  +           +K F  E +     +    
Sbjct: 211 PG-NFIFRTREFEQMELEFFCKPGEEIEWQNY---------WKTFASEWLTDLNISEDNM 260

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
           R+      + +           K         G+          + +Y L+         
Sbjct: 261 RLRDHDEDELSHYSNATTDIEYKFPFGWGELWGIAS--------RTDYDLR--------- 303

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK---------- 543
              Q   +    F  ++    +EK  P  I     G+    +  + + +           
Sbjct: 304 ---QHSEHSGEDFK-YHDPETNEKYIPYCIE-PSLGADRVTLAFLCDAYAEEGVEGSKDA 358

Query: 544 ---GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
               +    L+P +A V  ++      A +I   L S   +I+ D   ++I  + R    
Sbjct: 359 RTVMHFHPALAPYKAAVLPLSKKLSSEAIKIFEQLSSS-FAIDFDES-QSIGKRYRRQDE 416

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              P  I        +  + +R   S    ++ + +    L +
Sbjct: 417 IGTPYCITFDFDSLEDNQVTVRDRDSMEQVRMPISELETFLAE 459


>gi|298694847|gb|ADI98069.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED133]
          Length = 463

 Score = 82.1 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 56/370 (15%), Positives = 110/370 (29%), Gaps = 56/370 (15%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           +E     V     W +         N+        T        L+P    G    + + 
Sbjct: 132 DEGIVCPVSKTANWTEIRQ-----FNLMFKTFQGVTEDSTNEIFLRPETAQGIFVNYKNV 186

Query: 352 LKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIH 408
            +S  ++LP  + + G  +RNE +   + + R R F Q +   FC    E  +    K  
Sbjct: 187 QRSMRKKLPFGIGQIGKSFRNEITPG-NFIFRTREFEQMELEFFCKPGEEIEWQNYWKTF 245

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
                   +   E + ++     E    S+A  D                    I     
Sbjct: 246 ASDWLTSLNMNSENMRLRDHDEDELSHYSNATTD--------------------IEYKFP 285

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
            G G  +G       +              DF        ++    +EK  P  I     
Sbjct: 286 FGWGELWG----IASRTDFDLRKHAEHSGEDF-------RYHDPETNEKYIPYCIE-PSL 333

Query: 529 GSIERFIGIMIENFK-------------GNLPLWLSPIQAIVTTITSSAVEYAQEIANLL 575
           G+    +  + + +               +    L+P +A +  ++      A +I   L
Sbjct: 334 GADRVTLAFLCDAYDEEGVEGSKDARTVLHFHPALAPYKAAILPLSKKLSGEAIKIFEQL 393

Query: 576 KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
            S   SI+ D   ++I  + R       P  +        +  + +R   S    ++ + 
Sbjct: 394 SSK-FSIDFDES-QSIGKRYRRQDEIGTPYCVTFDFDSLEDNQVTVRDRDSMEQVRMPIS 451

Query: 636 DAIPILTKES 645
           +    LT+++
Sbjct: 452 ELEAFLTEKT 461


>gi|254730107|ref|ZP_05188685.1| prolyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
          Length = 232

 Score = 82.1 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 23/166 (13%), Positives = 56/166 (33%), Gaps = 12/166 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGNL 546
           R  + G I            A       ++    ++    +G    R +   IE    + 
Sbjct: 70  RGIEVGHIFHFGTKYSEPMGAKVQGPDGKEH---LVSMGSYGIGPSRLVAAAIEASHDDA 126

Query: 547 PL-WL---SPIQAIVT---TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
            + W    +P  A +             ++++   L +  +    D ++E    K     
Sbjct: 127 GIIWPKTIAPFGAGIVNMKPGDEGCDGVSEKLYEALTNAGVDPLLDDKDERPGAKFATMD 186

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           +  +P  +I G +  +   + ++   +   Q + +  AI +LT ++
Sbjct: 187 LIGLPTQVIVGPRGVAAGEVEVKDRKTGERQSLGIKAAINMLTAQA 232


>gi|300087876|ref|YP_003758398.1| glycyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
 gi|299527609|gb|ADJ26077.1| glycyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
          Length = 440

 Score = 81.8 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 65/439 (14%), Positives = 135/439 (30%), Gaps = 89/439 (20%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRR---KIKDDYEEINTPQVLDQHLWQQSGH-------- 310
             G   +   G ++   +     +   + +DD   +++  +++  +W+ SGH        
Sbjct: 33  QGGCWDYGPLGVQLKNNIKQAWWQSIVQERDDVVGVDSSILMNPRVWEASGHVTGFSDPM 92

Query: 311 ---------WDSYRANMFAVKCADDTIKDLRTF------------------ALKPMNCPG 343
                    W                + + R F                   L+P    G
Sbjct: 93  SDCLQCKMRWRPEDFEGDVCPSCGGQLTEPRQFNLMFKTFMGPVEDSAAVVYLRPETAQG 152

Query: 344 HVAVFNHGL-KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN 402
               F + L  + ++LP  +A+ G  +RNE + + + + R R F Q +   F        
Sbjct: 153 IFVNFENVLGTTRKKLPFGIAQIGKSFRNEIT-TGNFIFRSREFEQMELEYFVKPGTDDY 211

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
                    +  Y  FG     +KL    +  +   A +  A + ++  L  +  S  + 
Sbjct: 212 WHQHWLQARLDWYTSFGIRPENLKLRAHCDTEL---AHYAKACSDIQ-YLFPMGWSELEG 267

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
           I              + ++ LK            Q       +   ++     E   P +
Sbjct: 268 I------------ANRCDFDLK------------QHSEYSGKKLE-YFDEETRENIVPYV 302

Query: 523 IHRAVFGSIERFIGIMIENFK-----------GNLPLWLSPIQAIVTTITSSA--VEYAQ 569
           I     G     +  +I+ +              L   L+P +A V  ++        ++
Sbjct: 303 IE-PSAGVDRSVLAFLIDAYTEEPDKDETRTVLKLHPRLAPFKAAVLPLSKKEPLANLSR 361

Query: 570 EIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           EI   L+     +  D   ++I  + R       P  I    +   +  + +R   S T 
Sbjct: 362 EIYASLRKA-WMVTYDE-AQSIGRRYRRQDEIGTPYCITVDFQSLEDNQVTVRERDSMTQ 419

Query: 630 QKVSLLD----AIPILTKE 644
            ++ + +      P L  E
Sbjct: 420 VRIPIEEIKAYLFPRLKGE 438


>gi|150390772|ref|YP_001320821.1| glycyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
 gi|254781872|sp|A6TSJ4|SYG_ALKMQ RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|149950634|gb|ABR49162.1| glycyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
          Length = 462

 Score = 81.8 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 51/345 (14%), Positives = 110/345 (31%), Gaps = 47/345 (13%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+                 L+P    G    F +  ++  +++P  + + G  +RNE +
Sbjct: 151 FNLMFKTHQGVNEDTSTEIFLRPETAQGIFVNFKNVQRTARKKIPFGIGQIGKSFRNEIT 210

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              +   R R F Q +   FC             N       D   ++  ++L    E+ 
Sbjct: 211 PGNYTF-RTREFEQMELEFFCKPGDDLEWFDYWSNFCKKWLLDLSMKETSIRLRAHTEEE 269

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           +   + + +A   +       K         G+          + ++ LK          
Sbjct: 270 L---SHYSNATTDI-----EFKFPFGWGELWGIAD--------RTDFDLKQHTEH----S 309

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP------- 547
            +Q+ +  P           +EK  P  I     G+    +  +++ ++           
Sbjct: 310 GVQLIYQDPVT---------NEKYVPYCIE-PSLGADRVTLAFLVDAYEEEQIDEKDSRI 359

Query: 548 -----LWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
                  L+P +A V  +T    E + E+   L      I+ D    +I  + R H    
Sbjct: 360 VLKLHPALAPFKAAVLPLTKKLKEQSLELFEKLSDK-FMIDYDDAG-SIGKRYRRHDEIG 417

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLP 647
            P  I        +  + +R   +   Q+V++ + + +  +E + 
Sbjct: 418 TPYCITYDFDTLEDNCVTVRDRDTMEQQRVAIDE-LEVFLEEKIK 461


>gi|153938880|ref|YP_001392872.1| glycyl-tRNA synthetase [Clostridium botulinum F str. Langeland]
 gi|152934776|gb|ABS40274.1| glycine--tRNA ligase [Clostridium botulinum F str. Langeland]
 gi|295320849|gb|ADG01227.1| glycine--tRNA ligase [Clostridium botulinum F str. 230613]
          Length = 463

 Score = 81.8 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 56/349 (16%), Positives = 117/349 (33%), Gaps = 55/349 (15%)

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEP 373
           + N+        T        L+P    G    F +  + S +++P  +A+ G  +RNE 
Sbjct: 151 KFNLMFKTFQGVTEDAKSEIYLRPETAQGIFVNFKNVQRTSRKKVPFGIAQIGKSFRNEI 210

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP 431
           +   +   R R F Q +   FC    +  +    K +     I      E I  +  ++ 
Sbjct: 211 TPG-NFTFRTREFEQMELEFFCKPGTDLEWFNYWKDYCWNFLINLGINKENIRFRDHSQE 269

Query: 432 EKRVGSD--------------ALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           E    S+               LW  A+     +   +++S +D +N  +       Y P
Sbjct: 270 ELSHYSNATSDIEFLFPFGWGELWGVADRTDFDLKKHMEHSGED-LNY-LDPTTKERYVP 327

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
              Y ++ ++G D       VD                +  + + +H             
Sbjct: 328 ---YCIEPSLGADRVVLAFLVDAYDEEEL------EGGDVRNVLHLH------------- 365

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
                       L+P +A V  ++    + +QE+ ++L     +I+ D    +I  + R 
Sbjct: 366 ----------PALAPFKAAVLPLSKKLSDKSQEVYSMLSKK-FNIDYDEAG-SIGKRYRR 413

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
                 P  I        + ++ IR   +    +V++ + +    ++ L
Sbjct: 414 EDEIGTPYCITVDFDTLEDNTVTIRDRDTMNQIRVNINE-LEKFIEDKL 461


>gi|260757797|ref|ZP_05870145.1| prolyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
 gi|260668115|gb|EEX55055.1| prolyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
          Length = 232

 Score = 81.8 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 23/166 (13%), Positives = 56/166 (33%), Gaps = 12/166 (7%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGNL 546
           R  + G I            A       ++    ++    +G    R +   IE    + 
Sbjct: 70  RGIEVGHIFHFGTKYSEPMGAKVQGPDGKEH---LVSMGSYGIGPSRLVAAAIEASHDDA 126

Query: 547 PL-WL---SPIQAIVT---TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
            + W    +P  A +             ++++   L +  +    D ++E    K     
Sbjct: 127 GIIWPKTIAPFGAGIVNMKPGDEGCDGVSEKLYEALTNAGVDPLLDDKDERPGAKFATMD 186

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           +  +P  +I G +  +   + ++   +   Q + +  AI +LT ++
Sbjct: 187 LIGLPTQVIVGPRGVAAGEVEVKDRKTGERQSLGIKAAINMLTAQA 232


>gi|148381458|ref|YP_001255999.1| glycyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
 gi|153933636|ref|YP_001385833.1| glycyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|153935948|ref|YP_001389240.1| glycyl-tRNA synthetase [Clostridium botulinum A str. Hall]
 gi|148290942|emb|CAL85078.1| glycyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
 gi|152929680|gb|ABS35180.1| glycyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|152931862|gb|ABS37361.1| glycine--tRNA ligase [Clostridium botulinum A str. Hall]
          Length = 463

 Score = 81.8 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 56/348 (16%), Positives = 116/348 (33%), Gaps = 55/348 (15%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    F +  + S +++P  +A+ G  +RNE +
Sbjct: 152 FNLMFKTFQGVTEDAKSEIYLRPETAQGIFVNFKNVQRTSRKKVPFGIAQIGKSFRNEIT 211

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
              +   R R F Q +   FC    +  +    K +     I      E I  +  ++ E
Sbjct: 212 PG-NFTFRTREFEQMELEFFCKPGTDLEWFNYWKDYCWNFLINLGINKENIRFRDHSQEE 270

Query: 433 KRVGSD--------------ALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
               S+               LW  A+     +   +++S +D +N  +       Y P 
Sbjct: 271 LSHYSNATSDIEFLFPFGWGELWGVADRTDFDLKKHMEHSGED-LNY-LDPATKERYVP- 327

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
             Y ++ ++G D       VD                +  + + +H              
Sbjct: 328 --YCIEPSLGADRVVLAFLVDAYDEEEL------EGGDVRNVLHLH-------------- 365

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
                      L+P +A V  ++    + +QE+ ++L     +I+ D    +I  + R  
Sbjct: 366 ---------PALAPFKAAVLPLSKKLSDKSQEVYSMLSKK-FNIDYDEAG-SIGKRYRRE 414

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
                P  I        + ++ IR   +    +V++ + +    ++ L
Sbjct: 415 DEIGTPYCITVDFDTLEDNTVTIRDRDTMNQIRVNINE-LEKFIEDKL 461


>gi|312437966|gb|ADQ77037.1| glycyl-tRNA synthetase beta subunit [Staphylococcus aureus subsp.
           aureus TCH60]
          Length = 463

 Score = 81.8 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 57/370 (15%), Positives = 111/370 (30%), Gaps = 56/370 (15%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           +E     V     W +         N+        T        L+P    G    + + 
Sbjct: 132 DEGIVCPVSKTANWTEIRQ-----FNLMFKTFQGVTEDSTNEIFLRPETAQGIFVNYKNV 186

Query: 352 LKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIH 408
            +S  ++LP  + + G  +RNE +   + + R R F Q +   FC    E  +    K  
Sbjct: 187 QRSMRKKLPFGIGQIGKSFRNEITPG-NFIFRTREFEQMELEFFCKPGEEIEWQNYWKTF 245

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
                   +   E + ++     E    S+A  D                    I     
Sbjct: 246 ASDWLTSLNMSSENMRLRDHDEDELSHYSNATTD--------------------IEYKFP 285

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
            G G  +G         A   D+             R++       +EK  P  I     
Sbjct: 286 FGWGELWGI--------ASRTDFDLRKHGEHSGEDFRYHD---PETNEKYIPYCIE-PSL 333

Query: 529 GSIERFIGIMIENFK-------------GNLPLWLSPIQAIVTTITSSAVEYAQEIANLL 575
           G+    +  + + +               +    L+P +A +  ++      A +I   L
Sbjct: 334 GADRVTLAFLCDAYDEEGVEGSKDARTVLHFHPALAPYKAAILPLSKKLSGEAIKIFEQL 393

Query: 576 KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
            S   SI+ D   ++I  + R       P  +        +  + +R   S    ++ + 
Sbjct: 394 SSK-FSIDFDES-QSIGKRYRRQDEIGTPYCVTFDFDSLEDNQVTVRDRDSMEQVRMPIS 451

Query: 636 DAIPILTKES 645
           +    LT+++
Sbjct: 452 ELEAFLTEKT 461


>gi|260438844|ref|ZP_05792660.1| glycine--tRNA ligase [Butyrivibrio crossotus DSM 2876]
 gi|292808683|gb|EFF67888.1| glycine--tRNA ligase [Butyrivibrio crossotus DSM 2876]
          Length = 462

 Score = 81.8 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 51/372 (13%), Positives = 117/372 (31%), Gaps = 58/372 (15%)

Query: 279 LISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKP 338
           + ++++ K      EI  P    +   +       ++      + A +T+       L+P
Sbjct: 126 MENFIKEK------EIACPSCGKKDFTEIRQFNLMFKTFQGVTEDAKNTV------YLRP 173

Query: 339 MNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK 397
               G    F +  + S +++P  + + G  +RNE +   +   R R F Q +   FC  
Sbjct: 174 ETAQGIFVNFKNVQRTSRKKVPFGIGQIGKSFRNEITPG-NFTFRTREFEQMELEFFCKP 232

Query: 398 EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKN 457
                         I+  K  G +   ++      + +                     +
Sbjct: 233 GTDLEWFRYWRGFCINWLKTLGIKDEEMRARDHSPEEL------------------CFYS 274

Query: 458 SSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK 517
                I      G G  +G   +    D          +    N   +  +++ +  + K
Sbjct: 275 KGTTDIEFLFPFGWGELWGIA-DRTDYD----------LTQHQNTSGQDMSYFDDEDNSK 323

Query: 518 CHPVMIHRAVFGSIERFIGIMI-----ENFKG-------NLPLWLSPIQAIVTTITSSAV 565
             P ++     G+    +  +      E  +G       +    L+P++  V  ++    
Sbjct: 324 YIPYVVE-PSLGADRVTLAFLCSAYDEEELEGGDVRTVLHFHPALAPVKIGVLPLSKKLN 382

Query: 566 EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
           E A++I   L     + E D R   I  + R       P  +       ++  + +R   
Sbjct: 383 EGAEKIYADLSKK-YNCEFDDRGN-IGKRYRRQDEIGTPFCVTYDFDSETDGCVTVRDRD 440

Query: 626 STTTQKVSLLDA 637
           +   +++ + D 
Sbjct: 441 TMAQERIKIEDL 452


>gi|170070377|ref|XP_001869557.1| prolyl-tRNA synthetase [Culex quinquefasciatus]
 gi|167866293|gb|EDS29676.1| prolyl-tRNA synthetase [Culex quinquefasciatus]
          Length = 489

 Score = 81.8 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 81/230 (35%), Gaps = 16/230 (6%)

Query: 217 LSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIF 276
           ++R+      T       +   ++   +  R +    +   I + G+G  +      +  
Sbjct: 1   MNRLTKIFQPTLIVPKNAVVKNQDVTSKSQRLML---EQGLIRQAGNGTFYLMPLLQRSL 57

Query: 277 QTLISYMRR--KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           Q  +  +    +     +++  P +    LW+QSG  +S    +        T +  +  
Sbjct: 58  QKAVDLVDHFMQRHASAQKLTLPILTAASLWRQSGRLESAGPELMRT-----TDRHGKQQ 112

Query: 335 ALKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
            L P +     A+       SYR  P+RL +  + +R+E      GLMR + F   D + 
Sbjct: 113 ILGPTHEESITALVASISPVSYRAFPLRLYQISTKFRDEMKPRF-GLMRAKEFLMKDLYT 171

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR-VGSDALWD 442
           F   +    E  + +  +   Y+       +  +  R +   +G     +
Sbjct: 172 F---DVGRGEARETYEEVNEAYRKLFDAVGVGYVKVRGDTGTIGGSESHE 218


>gi|15922515|ref|NP_378184.1| threonyl-tRNA synthetase [Sulfolobus tokodaii str. 7]
 gi|15623305|dbj|BAB67293.1| 267aa long hypothetical threonyl-tRNA synthetase [Sulfolobus
           tokodaii str. 7]
          Length = 267

 Score = 81.8 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 34/194 (17%), Positives = 77/194 (39%), Gaps = 17/194 (8%)

Query: 450 GVLDTIKNSSQDR-INTGVLLGEGAFYGPKFEYILKDAIGRDWQC--GTIQVDFNLPSRF 506
            VL+ +K  S+   I     + EG            +  GR   C   +  +   +  + 
Sbjct: 48  AVLEYVKWLSKATSITEDEDVEEGE-----ISIKYLEPHGRRLPCINESPHIKVKVKGKI 102

Query: 507 NAFYVNSHSEKCHPVMIHRAVFG----SIERFIGIM--IENFKGNLPLWLSPIQAIVTTI 560
           +     S S+  + ++  +  +     ++  +  ++   +     LP+WLSPIQ  +  +
Sbjct: 103 DIVSQFSDSKNSYKIVEEKEEYSEVDVNLLTYYYLLSAQKESPPTLPIWLSPIQVRILPV 162

Query: 561 TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
               V+ A EIA+ +   +  ++ D   + +  KI       IP ++I G++E    S+ 
Sbjct: 163 KQDFVKSAIEIASKI---NGRVDVDDLPDGLGAKIARAGKDWIPYVVILGEREIKTLSLT 219

Query: 621 IRRFGSTTTQKVSL 634
           ++       +  ++
Sbjct: 220 VKVRKRNEQRSYTI 233


>gi|110775188|ref|XP_001122628.1| PREDICTED: threonyl-tRNA synthetase, cytoplasmic-like [Apis
           mellifera]
          Length = 77

 Score = 81.8 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 36/75 (48%), Gaps = 3/75 (4%)

Query: 581 SIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
             E D   ++T+N KIR   + +   I++ G+KE +  ++ +R   +    ++ + D + 
Sbjct: 1   MAELDTDPSDTLNKKIRNAQLAQFNFILVVGEKELNAGTVNVRTRDNVVHGEILVDDLLK 60

Query: 640 ILT--KESLPPDCQK 652
                KE    +C++
Sbjct: 61  KFRIFKERKDKNCEE 75


>gi|329314241|gb|AEB88654.1| Glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus T0131]
          Length = 463

 Score = 81.8 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 56/370 (15%), Positives = 110/370 (29%), Gaps = 56/370 (15%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           +E     V     W +         N+        T        L+P    G    + + 
Sbjct: 132 DEGIVCPVSKTANWTEIRQ-----FNLMFKTFQGVTEDSTNEIFLRPETAQGIFVNYKNV 186

Query: 352 LKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIH 408
            +S  ++LP  + + G  +RNE +   + + R R F Q +   FC    E  +    K  
Sbjct: 187 QRSMRKKLPFGIGQIGKSFRNEITPG-NFIFRTREFEQMELEFFCKPGEEIEWQNYWKTF 245

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
                   +   E + ++     E    S+A  D                    I     
Sbjct: 246 ASDWLTNLNMSSENMRLRDHDEDELSHYSNATTD--------------------IEYKFP 285

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
            G G  +G       +              DF        ++    +EK  P  I     
Sbjct: 286 FGWGELWG----IASRTDFDLRKHAEHSGEDF-------RYHDPETNEKYIPYCIE-PSL 333

Query: 529 GSIERFIGIMIENFK-------------GNLPLWLSPIQAIVTTITSSAVEYAQEIANLL 575
           G+    +  + + +               +    L+P +A +  ++      A +I   L
Sbjct: 334 GADRVTLAFLCDAYDEEGVEGSKDARTVLHFHPALAPYKAAILPLSKKLSGEAIKIFEQL 393

Query: 576 KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
            S   SI+ D   ++I  + R       P  +        +  + +R   S    ++ + 
Sbjct: 394 SSK-FSIDFDES-QSIGKRYRRQDEIGTPYCVTFDFDSLEDNQVTVRDRDSMEQVRMPIS 451

Query: 636 DAIPILTKES 645
           +    LT+++
Sbjct: 452 ELEAFLTEKT 461


>gi|315103267|gb|EFT75243.1| glycyl-tRNA synthetase [Propionibacterium acnes HL050PA2]
          Length = 506

 Score = 81.8 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 60/369 (16%), Positives = 116/369 (31%), Gaps = 54/369 (14%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           EE+N P   ++  W +         NM                 L+P    G    F + 
Sbjct: 166 EEVNCPNCGNKGQWTEPR-----DFNMMLKTYLGPVEDKSGLHYLRPETAQGIFVNFQNV 220

Query: 352 LKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
           L S  ++ P  +A+ G  +RNE +   + + R R F Q +   F              + 
Sbjct: 221 LTSARKKPPFGIAQTGKSFRNEITPG-NFIFRTREFEQMEMEFFVEPGTDEEWHQYWIDA 279

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
             + Y + G     ++    P+         +   +  K  +D          + G L G
Sbjct: 280 RTAWYTNLGINPDNLRHYEHPK---------EKLSHYSKRTVDVEYKFGFTGSDWGELEG 330

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
                  + ++ L +      +              +  Y +  + K +   +     G 
Sbjct: 331 IAN----RTDFDLGNHSRHSGK--------------DLSYYDQANNKRYLPYVIEPAAGL 372

Query: 531 IERFIGIM----IENFKGN------------LPLWLSPIQAIVTTIT--SSAVEYAQEIA 572
               +  M     E+   N            L   LSP++A V  ++  S     A+++A
Sbjct: 373 TRSLMAFMVDAYTEDEAPNAKGGVDKRTVLKLDPRLSPVKAAVLPLSRNSDLSPKARDLA 432

Query: 573 NLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
             L+ H  +++ D     I  + R       P  I        + ++ +R   +   Q+V
Sbjct: 433 ARLREH-WNVDFDDAQA-IGKRYRRQDEIGTPFCITVDFDSLEDDAVTVRERDTMAQQRV 490

Query: 633 SLLDAIPIL 641
           S+      L
Sbjct: 491 SIDKVEEYL 499


>gi|261883753|ref|ZP_06007792.1| threonyl-tRNA synthetase [Campylobacter fetus subsp. venerealis
           str. Azul-94]
          Length = 109

 Score = 81.8 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 4/93 (4%)

Query: 37  KAVAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAI 96
             +A  +N ++ D       G  EI       +L VIRHSCAH+MA A++ ++P  +  +
Sbjct: 17  DIIAYKVNEQIVDTQSYCGNGGEEIFFDNSKEALDVIRHSCAHLMAAAIKELYPNAKFFV 76

Query: 97  GPIIEDGFYYDF----DKEQPFSSDELAQIEKK 125
           GP IEDGFYYD        +     +L +IEK+
Sbjct: 77  GPCIEDGFYYDMRVSKSDGEKLGESDLEEIEKR 109


>gi|227827123|ref|YP_002828902.1| glycyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
 gi|227458918|gb|ACP37604.1| glycyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
          Length = 484

 Score = 81.8 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 69/440 (15%), Positives = 145/440 (32%), Gaps = 74/440 (16%)

Query: 268 WHRKGWKIFQTLIS----YMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKC 323
           W   G  + Q +I     +  +KI + +  ++   +L   +++ SGH  ++   +     
Sbjct: 46  WLPPGAMLRQKIIDSWINFFIKKIPNIFL-MDGSTILPLSVFEASGHLANFTDPVIKCPK 104

Query: 324 ADDTIK----------------------------------------DLRTFALKPMNCPG 343
             +T +                                        D    AL+P     
Sbjct: 105 CSNTYRVDHLLKETNGKLICPRDLTDLKDQEIKQKSLMLELTVGLADEINAALRPETAQN 164

Query: 344 HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE 403
               F +      +LP  +A+ G  YRNE S       R+R F Q +   F         
Sbjct: 165 IYINFMNFKAIGLKLPFAIAQIGRSYRNEISPR---GSRLREFVQMEIEEFVLP--FHLN 219

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG-----SDALWDDAENIMKGVLDTIKNS 458
              +++ +  I     +E+  +++      + G       A W   E   + + + +   
Sbjct: 220 SHPLYDNVKGIRLPIFYEEQTIEMELNEAVKKGLVPNIRLAFWIGREW--QWLTNELGLP 277

Query: 459 SQDRINTGVLLGEGAFY---GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS 515
                   V   E AFY       E  ++D    +      + D++L         N   
Sbjct: 278 GNKIRFRIVPSEERAFYSKGTVDVEVNMEDDW-VEIIGNAYRTDYDLTVHSKHSGANLSE 336

Query: 516 EKCHPVMIHRAVFGSIERFIGIMIENFKGN----------LPLWLSPIQAIVTTI--TSS 563
               P +I    FG     I +++ N+  N          +P  ++P++  + +I  +  
Sbjct: 337 NGTIPHVIE-PSFGLDRIAIAVLLLNYDPNPSDRNWPLFRIPYKIAPLEIGIASIHHSDE 395

Query: 564 AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRR 623
            +  A+++  +L+S        F    I+ +  +     IP++I    K   E ++ IR 
Sbjct: 396 YINIAEKVDLILRSLDYVTFKLFERGKIDAQYAKADTLGIPLVITIDSKTLEENTVTIRN 455

Query: 624 FGSTTTQKVSLLDAIPILTK 643
             +    +V++ +    +  
Sbjct: 456 RDTKAQIRVNIGEIAQAVKN 475


>gi|168183598|ref|ZP_02618262.1| glycine--tRNA ligase [Clostridium botulinum Bf]
 gi|237796979|ref|YP_002864531.1| glycyl-tRNA synthetase [Clostridium botulinum Ba4 str. 657]
 gi|182673186|gb|EDT85147.1| glycine--tRNA ligase [Clostridium botulinum Bf]
 gi|229262061|gb|ACQ53094.1| glycine--tRNA ligase [Clostridium botulinum Ba4 str. 657]
          Length = 463

 Score = 81.8 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 56/349 (16%), Positives = 117/349 (33%), Gaps = 55/349 (15%)

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEP 373
           + N+        T        L+P    G    F +  + S +++P  +A+ G  +RNE 
Sbjct: 151 KFNLMFKTFQGVTEDAKSEIYLRPETAQGIFVNFKNVQRTSRKKVPFGIAQIGKSFRNEI 210

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP 431
           +   +   R R F Q +   FC    +  +    K +     I      E I  +  ++ 
Sbjct: 211 TPG-NFTFRTREFEQMELEFFCKPGTDLEWFNYWKDYCWNFLINLGINKENIRFRDHSQE 269

Query: 432 EKRVGSD--------------ALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
           E    S+               LW  A+     +   +++S +D +N  +       Y P
Sbjct: 270 ELSHYSNATSDIEFLFPFGWGELWGVADRTDFDLKKHMEHSGED-LNY-LDPTTKERYVP 327

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
              Y ++ ++G D       VD                +  + + +H             
Sbjct: 328 ---YCIEPSLGADRVVLAFLVDAYDEEEL------EGGDVRNVLHLH------------- 365

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
                       L+P +A V  ++    + +QE+ ++L     +I+ D    +I  + R 
Sbjct: 366 ----------PALAPFKAAVLPLSKKLSDKSQEVYSMLSKK-FNIDYDEAG-SIGKRYRR 413

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
                 P  I        + ++ IR   +    +V++ + +    ++ L
Sbjct: 414 EDEIGTPYCITVDFDTLEDNTVTIRDRDTMNQIRVNINE-LEKFIEDKL 461


>gi|15924555|ref|NP_372089.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50]
 gi|15927145|ref|NP_374678.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus N315]
 gi|21283246|ref|NP_646334.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
 gi|49483813|ref|YP_041037.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|49486400|ref|YP_043621.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57651958|ref|YP_186462.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
 gi|87161756|ref|YP_494220.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|88195373|ref|YP_500177.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|148268049|ref|YP_001246992.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|150394117|ref|YP_001316792.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|151221680|ref|YP_001332502.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|156979883|ref|YP_001442142.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
 gi|161509793|ref|YP_001575452.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|221140015|ref|ZP_03564508.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           JKD6009]
 gi|253314936|ref|ZP_04838149.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           CF-Marseille]
 gi|253732218|ref|ZP_04866383.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253733185|ref|ZP_04867350.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TCH130]
 gi|255006351|ref|ZP_05144952.2| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Mu50-omega]
 gi|257425690|ref|ZP_05602114.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257428351|ref|ZP_05604749.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257430988|ref|ZP_05607368.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 68-397]
 gi|257433676|ref|ZP_05610034.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus E1410]
 gi|257436590|ref|ZP_05612634.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876]
 gi|257793641|ref|ZP_05642620.1| glycyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|258411059|ref|ZP_05681339.1| glycyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|258420137|ref|ZP_05683092.1| glycyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|258437397|ref|ZP_05689381.1| glycyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|258443603|ref|ZP_05691942.1| glycyl-tRNA synthetase [Staphylococcus aureus A8115]
 gi|258446810|ref|ZP_05694964.1| glycyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|258448724|ref|ZP_05696836.1| glycyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|258450606|ref|ZP_05698668.1| glycyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|258453541|ref|ZP_05701519.1| glycyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|262049140|ref|ZP_06022017.1| glycyl-tRNA synthetase [Staphylococcus aureus D30]
 gi|262051164|ref|ZP_06023388.1| glycyl-tRNA synthetase [Staphylococcus aureus 930918-3]
 gi|269203193|ref|YP_003282462.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98]
 gi|282893066|ref|ZP_06301300.1| glycyl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|282904147|ref|ZP_06312035.1| glycine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|282905974|ref|ZP_06313829.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282908884|ref|ZP_06316702.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282911203|ref|ZP_06319005.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282914372|ref|ZP_06322158.1| glycine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282916835|ref|ZP_06324593.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139]
 gi|282919341|ref|ZP_06327076.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427]
 gi|282920114|ref|ZP_06327839.1| glycyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|282924666|ref|ZP_06332334.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101]
 gi|282928198|ref|ZP_06335803.1| glycyl-tRNA synthetase [Staphylococcus aureus A10102]
 gi|283770641|ref|ZP_06343533.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
 gi|283958329|ref|ZP_06375780.1| glycine--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|284024624|ref|ZP_06379022.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 132]
 gi|293503446|ref|ZP_06667293.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 58-424]
 gi|293510463|ref|ZP_06669169.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809]
 gi|293531003|ref|ZP_06671685.1| glycine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|294848596|ref|ZP_06789342.1| glycyl-tRNA synthetase [Staphylococcus aureus A9754]
 gi|295406688|ref|ZP_06816493.1| glycyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|295428143|ref|ZP_06820775.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|296275813|ref|ZP_06858320.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MR1]
 gi|297207716|ref|ZP_06924151.1| glycine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|297245730|ref|ZP_06929595.1| glycyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|297590891|ref|ZP_06949529.1| glycine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|300911797|ref|ZP_07129240.1| glycine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
 gi|304380846|ref|ZP_07363506.1| glycyl-tRNA synthetase beta subunit [Staphylococcus aureus subsp.
           aureus ATCC BAA-39]
 gi|54039670|sp|P67035|SYG_STAAW RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|54039676|sp|P99129|SYG_STAAN RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|54042030|sp|P67034|SYG_STAAM RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|56749385|sp|Q6G902|SYG_STAAS RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|56749414|sp|Q6GGD5|SYG_STAAR RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|71153560|sp|Q5HFJ5|SYG_STAAC RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|123291788|sp|Q2FY08|SYG_STAA8 RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|123749609|sp|Q2FGF8|SYG_STAA3 RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|166227939|sp|A7X2W2|SYG_STAA1 RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|172048905|sp|A6QHA8|SYG_STAAE RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|189082278|sp|A6U237|SYG_STAA2 RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|189082279|sp|A5IT93|SYG_STAA9 RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|189082280|sp|A8Z4A4|SYG_STAAT RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|13701363|dbj|BAB42657.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus N315]
 gi|14247336|dbj|BAB57727.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50]
 gi|21204686|dbj|BAB95382.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
 gi|49241942|emb|CAG40637.1| putative glycyl-tRNA synthetase [Staphylococcus aureus subsp.
           aureus MRSA252]
 gi|49244843|emb|CAG43304.1| putative glycyl-tRNA synthetase [Staphylococcus aureus subsp.
           aureus MSSA476]
 gi|57286144|gb|AAW38238.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
 gi|87127730|gb|ABD22244.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87202931|gb|ABD30741.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|147741118|gb|ABQ49416.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|149946569|gb|ABR52505.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|150374480|dbj|BAF67740.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|156722018|dbj|BAF78435.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
 gi|160368602|gb|ABX29573.1| glycine--tRNA ligase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|253724007|gb|EES92736.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253728725|gb|EES97454.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TCH130]
 gi|257271384|gb|EEV03530.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257275192|gb|EEV06679.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257278418|gb|EEV09054.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 68-397]
 gi|257281769|gb|EEV11906.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus E1410]
 gi|257283941|gb|EEV14064.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876]
 gi|257787613|gb|EEV25953.1| glycyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|257840209|gb|EEV64673.1| glycyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|257843848|gb|EEV68242.1| glycyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|257848602|gb|EEV72590.1| glycyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|257851009|gb|EEV74952.1| glycyl-tRNA synthetase [Staphylococcus aureus A8115]
 gi|257854385|gb|EEV77334.1| glycyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|257858002|gb|EEV80891.1| glycyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|257861764|gb|EEV84563.1| glycyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|257864272|gb|EEV87022.1| glycyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|259160801|gb|EEW45821.1| glycyl-tRNA synthetase [Staphylococcus aureus 930918-3]
 gi|259162809|gb|EEW47374.1| glycyl-tRNA synthetase [Staphylococcus aureus D30]
 gi|262075483|gb|ACY11456.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98]
 gi|269941055|emb|CBI49439.1| putative glycyl-tRNA synthetase [Staphylococcus aureus subsp.
           aureus TW20]
 gi|282313501|gb|EFB43896.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101]
 gi|282317151|gb|EFB47525.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427]
 gi|282319322|gb|EFB49674.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139]
 gi|282321553|gb|EFB51878.1| glycine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282324898|gb|EFB55208.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282327148|gb|EFB57443.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282331266|gb|EFB60780.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282590005|gb|EFB95087.1| glycyl-tRNA synthetase [Staphylococcus aureus A10102]
 gi|282594462|gb|EFB99447.1| glycyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|282595765|gb|EFC00729.1| glycine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|282764384|gb|EFC04510.1| glycyl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|283460788|gb|EFC07878.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
 gi|283470843|emb|CAQ50054.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ST398]
 gi|283790478|gb|EFC29295.1| glycine--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|285817247|gb|ADC37734.1| Glycyl-tRNA synthetase [Staphylococcus aureus 04-02981]
 gi|290920271|gb|EFD97337.1| glycine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|291095112|gb|EFE25377.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 58-424]
 gi|291466827|gb|EFF09347.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809]
 gi|294824622|gb|EFG41045.1| glycyl-tRNA synthetase [Staphylococcus aureus A9754]
 gi|294968435|gb|EFG44459.1| glycyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|295128501|gb|EFG58135.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|296887733|gb|EFH26631.1| glycine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|297177381|gb|EFH36633.1| glycyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|297575777|gb|EFH94493.1| glycine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|300886043|gb|EFK81245.1| glycine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
 gi|302333241|gb|ADL23434.1| putative glycyl-tRNA synthetase [Staphylococcus aureus subsp.
           aureus JKD6159]
 gi|302751396|gb|ADL65573.1| putative glycyl-tRNA synthetase [Staphylococcus aureus subsp.
           aureus str. JKD6008]
 gi|304340573|gb|EFM06507.1| glycyl-tRNA synthetase beta subunit [Staphylococcus aureus subsp.
           aureus ATCC BAA-39]
 gi|312829953|emb|CBX34795.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ECT-R
           2]
 gi|315129843|gb|EFT85833.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS03]
 gi|315195467|gb|EFU25854.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS00]
 gi|315198740|gb|EFU29068.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS01]
 gi|320140550|gb|EFW32404.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA131]
 gi|320144087|gb|EFW35856.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA177]
 gi|323440463|gb|EGA98175.1| glycyl-tRNA synthetase [Staphylococcus aureus O11]
 gi|323443237|gb|EGB00855.1| glycyl-tRNA synthetase [Staphylococcus aureus O46]
 gi|329727248|gb|EGG63704.1| glycine--tRNA ligase [Staphylococcus aureus subsp. aureus 21172]
 gi|329728442|gb|EGG64879.1| glycine--tRNA ligase [Staphylococcus aureus subsp. aureus 21189]
 gi|329733064|gb|EGG69401.1| glycine--tRNA ligase [Staphylococcus aureus subsp. aureus 21193]
          Length = 463

 Score = 81.8 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 56/370 (15%), Positives = 110/370 (29%), Gaps = 56/370 (15%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           +E     V     W +         N+        T        L+P    G    + + 
Sbjct: 132 DEGIVCPVSKTANWTEIRQ-----FNLMFKTFQGVTEDSTNEIFLRPETAQGIFVNYKNV 186

Query: 352 LKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIH 408
            +S  ++LP  + + G  +RNE +   + + R R F Q +   FC    E  +    K  
Sbjct: 187 QRSMRKKLPFGIGQIGKSFRNEITPG-NFIFRTREFEQMELEFFCKPGEEIEWQNYWKTF 245

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
                   +   E + ++     E    S+A  D                    I     
Sbjct: 246 ASDWLTSLNMSSENMRLRDHDEDELSHYSNATTD--------------------IEYKFP 285

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
            G G  +G       +              DF        ++    +EK  P  I     
Sbjct: 286 FGWGELWG----IASRTDFDLRKHAEHSGEDF-------RYHDPETNEKYIPYCIE-PSL 333

Query: 529 GSIERFIGIMIENFK-------------GNLPLWLSPIQAIVTTITSSAVEYAQEIANLL 575
           G+    +  + + +               +    L+P +A +  ++      A +I   L
Sbjct: 334 GADRVTLAFLCDAYDEEGVEGSKDARTVLHFHPALAPYKAAILPLSKKLSGEAIKIFEQL 393

Query: 576 KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
            S   SI+ D   ++I  + R       P  +        +  + +R   S    ++ + 
Sbjct: 394 SSK-FSIDFDES-QSIGKRYRRQDEIGTPYCVTFDFDSLEDNQVTVRDRDSMEQVRMPIS 451

Query: 636 DAIPILTKES 645
           +    LT+++
Sbjct: 452 ELEAFLTEKT 461


>gi|330833399|ref|YP_004402224.1| hypothetical protein SSUST3_1623 [Streptococcus suis ST3]
 gi|329307622|gb|AEB82038.1| hypothetical protein SSUST3_1623 [Streptococcus suis ST3]
          Length = 424

 Score = 81.8 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 39/222 (17%), Positives = 87/222 (39%), Gaps = 20/222 (9%)

Query: 242 EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINT 296
           E + H  L  ++D+          G+  +F+   G ++ + L ++M    I + Y+EI T
Sbjct: 136 EPKAHWDLGEDLDILDWERGAKVTGARFLFYKNLGARLERALYNFMLDEHIAEGYQEIIT 195

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +++ +    +G +  ++ + F +   +        F L P         + + +   +
Sbjct: 196 PYMVNHNSMFGTGQYPKFKEDTFELADTN--------FVLIPTAEVPLTNYYRNEILEEK 247

Query: 357 ELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           +LP+        +R+E   +     GL+R+  F + +   F T EQ ++E  K+     +
Sbjct: 248 DLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFATPEQSYDELEKMTANAEN 307

Query: 414 IYKDFGFEKI----MVKLSTRPEKRVGSDALWDDAENIMKGV 451
           I +  G                  +     +W  A+N  + +
Sbjct: 308 ILQKLGLPYRVLALCTGDMGFSAAKTYDLEVWIPAQNAYREI 349


>gi|317495322|ref|ZP_07953692.1| glycyl-tRNA synthetase [Gemella moribillum M424]
 gi|316914744|gb|EFV36220.1| glycyl-tRNA synthetase [Gemella moribillum M424]
          Length = 457

 Score = 81.8 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 52/381 (13%), Positives = 118/381 (30%), Gaps = 58/381 (15%)

Query: 276 FQTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFA 335
           F+ L + + R+       I  P+               ++ N   V+ +           
Sbjct: 118 FEELENIIEREN------IKCPECGKHDFTNIRQFNLMFKTNQGVVENS------TSQIY 165

Query: 336 LKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           L+P    G    F +  +S  ++LP  + + G  +RNE +   + + R R F Q +   F
Sbjct: 166 LRPETAQGIFVNFKNVQRSMRKKLPFGIGQIGKSFRNEITPG-NFIFRTREFEQMELEFF 224

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDT 454
           C      +      +   +   D G  K  ++L     + +   + + +A   +      
Sbjct: 225 CVPGTELDWHKAWKDTCENWLLDLGMTKENIRLRDHDPEEL---SHYSNATTDI-----E 276

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH 514
            K         G+          + +Y LK              D               
Sbjct: 277 FKFPFGWGELWGIAS--------RTDYDLK------QHMEHSGQDMTYQDLLT------- 315

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIENFK------------GNLPLWLSPIQAIVTTITS 562
           +EK  P  I     G     +  + + +                   L+P +A +  ++ 
Sbjct: 316 NEKYIPYCIE-PSVGVDRVLLAFLCDAYNEEEVGENDTRTVLKFHPVLAPYKAAILPLSK 374

Query: 563 SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
              + A E+ + L +    ++ D    +I  + R       P  I    +  ++  + +R
Sbjct: 375 KLSDKASEVYSQL-AADFMVDFDETG-SIGKRYRRQDEIGTPFCITYDFESENDGMVTVR 432

Query: 623 RFGSTTTQKVSLLDAIPILTK 643
              +    ++++ +    + +
Sbjct: 433 ERDTMEQTRIAISELKQYIEE 453


>gi|12045139|ref|NP_072950.1| prolyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|255660459|ref|ZP_05405868.1| prolyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|1351169|sp|P47525|SYP_MYCGE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|1045979|gb|AAC71505.1| prolyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|166078657|gb|ABY79275.1| prolyl-tRNA synthetase [synthetic Mycoplasma genitalium JCVI-1.0]
          Length = 483

 Score = 81.8 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 53/356 (14%), Positives = 112/356 (31%), Gaps = 62/356 (17%)

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
               ++  H   +   +F +        +     L+P +      ++     SY +LP+ 
Sbjct: 88  SEYQKEKTHIKGFNPELFLINQVGQKQLND-PLVLRPTSEIAFCNLWKKQELSYHDLPLI 146

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH-VFCTKEQMFNECLKIHNLIISIYKDFGF 420
             ++  V+R E   +    +R   F   + H +F  + Q     +   NL   +  +   
Sbjct: 147 YNQWTQVFRAEK--NTRPFLRNSEFYWQETHGLFVDQSQSEQAAISFWNLYQDLIINKLC 204

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE 480
               V L +  EK  G+   W                                      E
Sbjct: 205 IPAFVGLKSESEKFAGAKNTW------------------------------------TIE 228

Query: 481 YILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
            I+ D  G+  QC T   +       F   Y +  ++K  P        G   R +G + 
Sbjct: 229 AIMPD--GQSLQCATSHDLGDTFTKSFTISYQSKTNQKMTP---SSFSCGMSTRILGAIF 283

Query: 540 ----ENFKGNLPLWLSPIQAIVT----TITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
               +++   LP +L+  Q  +              A  + + L+   +       N  +
Sbjct: 284 LTHSDDYGLVLPWYLASKQVKLYLFDKNNNPKTRALAFLVKDFLEKLKIRFSFIEINNQL 343

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL----DAIPILTK 643
             ++ +  I+ IP+ +I  D E   ++I I    +     ++      + + ++  
Sbjct: 344 GKQLLKGEIEGIPLQMIV-DNE---KTINIFNRLTRLKTSLTFANLQTEFVNLVNN 395


>gi|282854107|ref|ZP_06263444.1| glycine--tRNA ligase [Propionibacterium acnes J139]
 gi|282583560|gb|EFB88940.1| glycine--tRNA ligase [Propionibacterium acnes J139]
          Length = 481

 Score = 81.8 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 61/369 (16%), Positives = 116/369 (31%), Gaps = 54/369 (14%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           EE+N P   ++  W +         NM                 L+P    G    F + 
Sbjct: 141 EEVNCPNCGNKGQWTEPR-----DFNMMLKTYLGPVEDKSGLHYLRPETAQGIFVNFQNV 195

Query: 352 LKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
           L S  ++ P  +A+ G  +RNE +   + + R R F Q +   F              + 
Sbjct: 196 LTSARKKPPFGIAQTGKSFRNEITPG-NFIFRTREFEQMEMEFFVEPGTDEEWHQYWIDA 254

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
             + Y D G     ++    P+         +   +  K  +D          + G L G
Sbjct: 255 RTAWYTDLGINPDNLRHYEHPK---------EKLSHYSKRTVDVEYKFGFTGSDWGELEG 305

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
                  + ++ L +      +              +  Y +  + K +   +     G 
Sbjct: 306 IAN----RTDFDLGNHSRHSGK--------------DLSYYDQANNKRYLPYVIEPAAGL 347

Query: 531 IERFIGIM----IENFKGN------------LPLWLSPIQAIVTTIT--SSAVEYAQEIA 572
               +  M     E+   N            L   LSP++A V  ++  S     A+++A
Sbjct: 348 TRSLMAFMVDAYTEDEAPNAKGGVDKRTVLKLDPRLSPVKAAVLPLSRNSDLSPKARDLA 407

Query: 573 NLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
             L+ H  +++ D     I  + R       P  I        + ++ +R   +   Q+V
Sbjct: 408 ARLREH-WNVDFDDAQA-IGKRYRRQDEIGTPFCITVDFDSLEDDAVTVRERDTMAQQRV 465

Query: 633 SLLDAIPIL 641
           S+      L
Sbjct: 466 SIDKVEEYL 474


>gi|119716172|ref|YP_923137.1| glycyl-tRNA synthetase [Nocardioides sp. JS614]
 gi|119536833|gb|ABL81450.1| glycyl-tRNA synthetase [Nocardioides sp. JS614]
          Length = 471

 Score = 81.8 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 47/327 (14%), Positives = 105/327 (32%), Gaps = 48/327 (14%)

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELP-VRLAEFGSVYRNEPSGSLHGLMRVRGF 386
             +     L+P    G    F + + S R  P   +A+ G  +RNE +   + + R R F
Sbjct: 161 ENEEGLHYLRPETAQGIFINFANVVTSSRHKPPFGIAQIGKSFRNEITPG-NFIFRTREF 219

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
            Q +   F    +         +     Y D G +   ++    P+         +   +
Sbjct: 220 EQMEMEFFVKPGEDKEWHQYWIDERTRWYVDLGIDPDNLRHFEHPQ---------EKLSH 270

Query: 447 IMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF 506
                +D            G L G            + +    D    +     +L    
Sbjct: 271 YSTRTVDIEYRFRFAGSEWGELEG------------IANRTDFDLSTHSKHSGQDLS--- 315

Query: 507 NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNL------------PLWL 550
             ++  +++E+  P +I     G     +  ++    E+   N                L
Sbjct: 316 --YFDQANNERYVPYVIE-PAAGLSRSLMTFLVDAYQEDEAPNTKGGVDKRTVLRLDPRL 372

Query: 551 SPIQAIVTTITSSAV--EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIII 608
           +P++  V  ++ +A     A+++A  L+     ++ D     I  + R       P  + 
Sbjct: 373 APVKVAVLPLSRNADLSPKAKDLAMELRRAGWHVDFDDSGA-IGRRYRRQDEIGTPYCVT 431

Query: 609 CGDKEASERSIGIRRFGSTTTQKVSLL 635
              +   ++++ +R   S   +++ L 
Sbjct: 432 VDFETLDDQAVTVRERDSMQQERIGLD 458


>gi|329766897|ref|ZP_08258425.1| glycyl-tRNA synthetase [Gemella haemolysans M341]
 gi|328837622|gb|EGF87247.1| glycyl-tRNA synthetase [Gemella haemolysans M341]
          Length = 457

 Score = 81.8 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 51/329 (15%), Positives = 108/329 (32%), Gaps = 22/329 (6%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+                 L+P    G    F +  +S  ++LP  + + G  +RNE +
Sbjct: 146 FNLMFKTNQGVVENSTSQIYLRPETAQGIFVNFKNVQRSMRKKLPFGIGQIGKSFRNEIT 205

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              + + R R F Q +   FC      +      N       D G  K  ++L    ++ 
Sbjct: 206 PG-NFIFRTREFEQMELEFFCEPGTELDWHTTWKNNCEKFLLDLGMTKENIRLRDHDQEE 264

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           +   + + +A   +       K         G+          + +Y LK  +    Q  
Sbjct: 265 L---SHYSNATTDI-----EFKFPFGWGELWGIAS--------RTDYDLKQHMEHSGQDL 308

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQ 554
           T Q D +   +F  + +   S     V++        E  +G             L+P +
Sbjct: 309 TYQ-DLSTNEKFIPYCI-EPSVGVDRVLLAFLCDAYNEEEVGENDTRTVLKFHPALAPFK 366

Query: 555 AIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
           A V  ++    + A E+   L +    ++ D    +I  + R       P  I    +  
Sbjct: 367 AAVLPLSKKLSDKAVEVYQQL-AADFMVDFDETG-SIGKRYRRQDEVGTPFCITYDFESE 424

Query: 615 SERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           ++  + +R   +    ++ + +    + +
Sbjct: 425 NDGMVTVRDRDTMEQTRIPIAELKQYIEE 453


>gi|313115472|ref|ZP_07800937.1| glycyl-tRNA synthetase [Faecalibacterium cf. prausnitzii KLE1255]
 gi|310622182|gb|EFQ05672.1| glycyl-tRNA synthetase [Faecalibacterium cf. prausnitzii KLE1255]
          Length = 473

 Score = 81.8 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 51/348 (14%), Positives = 103/348 (29%), Gaps = 57/348 (16%)

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEP 373
           + N+        T     T  L+P    G    F +  ++  R+LP  + + G  +RNE 
Sbjct: 148 KFNLMFKTAIGVTEDSSSTCYLRPETAQGIFVNFANIQRTTRRKLPFGVCQVGKAFRNEI 207

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
           +   +   R R F Q +   FC             +   +     G +K  ++L      
Sbjct: 208 TPG-NFTFRTREFEQMECEFFCKPGTDLEWFAYWKDYCENWLLSLGIKKEHLRLRDHEPA 266

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
            +   A +  A   ++             I       +   Y                  
Sbjct: 267 EL---AFYSRATTDIEYAFPFTDWGELWGI------ADRTNYALT--------------- 302

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK---------- 543
                     S  +  Y +S + + +   +     G     +  + E +           
Sbjct: 303 -----RHQEASGKSLEYFDSETNEHYIPYVIEPSLGCDRVALAFLCEAYDEEHLTDSKGK 357

Query: 544 ------GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
                  +L   L+P +  V  ++    E A EI N L  +   ++ D    +I  + R 
Sbjct: 358 EDIRTVLHLHPALAPYKCAVLPLSKKLGEKAMEIRNELSKY-FMVDYDDTG-SIGKRYRR 415

Query: 598 HSIKKIPIIIIC-----GDKE---ASERSIGIRRFGSTTTQKVSLLDA 637
                 P  I       GD+    A++  + +R   +    ++ + + 
Sbjct: 416 EDEIGTPYCITVDFDTVGDEAKGIAADNCVTVRDRDTMEQVRMPISEL 463


>gi|258423993|ref|ZP_05686875.1| glycyl-tRNA synthetase [Staphylococcus aureus A9635]
 gi|257845614|gb|EEV69646.1| glycyl-tRNA synthetase [Staphylococcus aureus A9635]
          Length = 463

 Score = 81.8 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 55/370 (14%), Positives = 110/370 (29%), Gaps = 56/370 (15%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           +E     V     W +         N+        T        L+P    G    + + 
Sbjct: 132 DEGIVCPVSKTANWTEIRQ-----FNLMFKTFQGVTEDSTNEIFLRPETAQGIFVNYKNV 186

Query: 352 LKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIH 408
            +S  ++LP  + + G  +RNE +   + + R R F Q +   FC    E  +    K  
Sbjct: 187 QRSMRKKLPFGIGQIGKSFRNEITPG-NFIFRTREFEQMELEFFCKPGEEIEWQNYWKTF 245

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
                   +   + + ++     E    S+A  D                    I     
Sbjct: 246 ASDWLTSLNMSSDNMRLRDHDEDELSHYSNATTD--------------------IEYKFP 285

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
            G G  +G       +              DF        ++    +EK  P  I     
Sbjct: 286 FGWGELWG----IASRTDFDLRKHAEHSGEDF-------RYHDPETNEKYIPYCIE-PSL 333

Query: 529 GSIERFIGIMIENFK-------------GNLPLWLSPIQAIVTTITSSAVEYAQEIANLL 575
           G+    +  + + +               +    L+P +A +  ++      A +I   L
Sbjct: 334 GADRVTLAFLCDAYDEEGVEGSKDARTVLHFHPALAPYKAAILPLSKKLSGEAIKIFEQL 393

Query: 576 KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
            S   SI+ D   ++I  + R       P  +        +  + +R   S    ++ + 
Sbjct: 394 SSK-FSIDFDES-QSIGKRYRRQDEIGTPYCVTFDFDSLEDNQVTVRDRDSMEQVRMPIS 451

Query: 636 DAIPILTKES 645
           +    LT+++
Sbjct: 452 ELEAFLTEKT 461


>gi|327400952|ref|YP_004341791.1| ATP phosphoribosyltransferase regulatory subunit [Archaeoglobus
           veneficus SNP6]
 gi|327316460|gb|AEA47076.1| ATP phosphoribosyltransferase regulatory subunit [Archaeoglobus
           veneficus SNP6]
          Length = 416

 Score = 81.8 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 58/418 (13%), Positives = 119/418 (28%), Gaps = 50/418 (11%)

Query: 268 WHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADD 326
           +     +  + + + MRR      Y EI TP      L+                +    
Sbjct: 12  FLPDEMEKRRAIEAVMRRIAESYGYREIATPTFEHLELFTIKS------GEGIVEELYAF 65

Query: 327 TIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
             K  R  AL+P      + +F +   S    P+R   F + +R E         R R F
Sbjct: 66  KDKGGRDLALRPELTAPVMRLFVNE-CSVMPRPLRFYYFANCFRYERPQK----GRYREF 120

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
            Q    V            ++  L   I  +   +  +        + +  D   D A  
Sbjct: 121 WQFG--VELIGSSSHLSDAEVIALAYRIMDELNLDFELHIGHVGLLRHLLKDIEEDRASK 178

Query: 447 IMKGVLDTIKN---SSQDRINTGVLLGEGAF----YGPKFEYILK--------DAIGRDW 491
           IM+ +         S    IN    L E  +         + +++        D    + 
Sbjct: 179 IMRLIDKKDVEGLSSYLREINAPEELAEKIYALIELTGSRDVLVEASRLIPDFDMSHMEK 238

Query: 492 QCGTI---------------QVDFNLPSRFNAFYVNSHSEKCHP------VMIHRAVFGS 530
            C  +                +D+     F A+  +    +          + H      
Sbjct: 239 LCDVLDSMNVNYVIDLGIARGLDYYTGVVFEAYAKHGLGAQKQICGGGSYRLTHLFGGED 298

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
           +      +  +    +     P + ++  +       A  IA  L+     + TD     
Sbjct: 299 VPSTGFALGFDRIAEICEITPPQKPVIVVVNVGFEGEAFRIAEELRKQGFRVVTDVMERN 358

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
           I  +    +       ++ G +E       ++   +    ++S  + +  L++E+  P
Sbjct: 359 IRKQFSYANDINASFAVVVGKREIESGRYTLKNMVTGEHYELSFEELVKHLSREAQLP 416


>gi|82751168|ref|YP_416909.1| glycyl-tRNA synthetase [Staphylococcus aureus RF122]
 gi|123768505|sp|Q2YT14|SYG_STAAB RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|82656699|emb|CAI81126.1| glycyl-tRNA synthetase [Staphylococcus aureus RF122]
          Length = 463

 Score = 81.8 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 56/370 (15%), Positives = 110/370 (29%), Gaps = 56/370 (15%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           +E     V     W +         N+        T        L+P    G    + + 
Sbjct: 132 DEGIVCPVSKTANWTEIRQ-----FNLMFKTFQGVTEDSTNEIFLRPETAQGIFVNYKNV 186

Query: 352 LKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIH 408
            +S  ++LP  + + G  +RNE +   + + R R F Q +   FC    E  +    K  
Sbjct: 187 QRSMRKKLPFGIGQIGKSFRNEITPG-NFIFRTREFEQMELEFFCKPGEEIEWQNYWKTF 245

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
                   +   E + ++     E    S+A  D                    I     
Sbjct: 246 ASDWLTSLNMSSENMRLRDHDEDELSHYSNATTD--------------------IEYKFP 285

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
            G G  +G       +              DF        ++    +EK  P  I     
Sbjct: 286 FGWGELWG----IASRTDFDLRKHAEHSGEDF-------RYHDPETNEKYIPYCIE-PSL 333

Query: 529 GSIERFIGIMIENFK-------------GNLPLWLSPIQAIVTTITSSAVEYAQEIANLL 575
           G+    +  + + +               +    L+P +A +  ++      A +I   L
Sbjct: 334 GADRVTLAFLCDAYDEEGVEGSKDARTVLHFHPALAPYKAAILPLSKKLSGEAIKIFEQL 393

Query: 576 KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
            S   SI+ D   ++I  + R       P  +        +  + +R   S    ++ + 
Sbjct: 394 SSK-FSIDFDES-QSIGKRYRRQDEIGTPYCVTFDFDSLEDNQVTVRDRDSMEQVRMPIS 451

Query: 636 DAIPILTKES 645
           +    LT+++
Sbjct: 452 ELEAFLTEKT 461


>gi|68062839|ref|XP_673428.1| hypothetical protein [Plasmodium berghei strain ANKA]
 gi|56491269|emb|CAI02288.1| hypothetical protein PB300647.00.0 [Plasmodium berghei]
          Length = 245

 Score = 81.8 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 51/128 (39%), Gaps = 11/128 (8%)

Query: 522 MIHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTTITSSAVE------YAQEI 571
            +H+  +G   R IG+MI     N  L L P     +A++  I     +      Y ++I
Sbjct: 2   FVHQTSWGCTTRSIGVMIMIHSDNKGLILPPNVAKYKAVIVPILYKNSDETAIFNYCKDI 61

Query: 572 ANLLKSHHLSIETDFRN-ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
             +LK+  ++   D R+  +  YK     ++ IPI I  G K+    S    R  +    
Sbjct: 62  EKVLKNAQINCIFDDRDLYSPGYKFNHWELRGIPIRIEVGPKDIQNNSCVFVRRDNNQKF 121

Query: 631 KVSLLDAI 638
            +     +
Sbjct: 122 NIKKESVL 129


>gi|228469877|ref|ZP_04054816.1| glycyl-tRNA synthetase [Porphyromonas uenonis 60-3]
 gi|228308512|gb|EEK17300.1| glycyl-tRNA synthetase [Porphyromonas uenonis 60-3]
          Length = 517

 Score = 81.4 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 52/371 (14%), Positives = 113/371 (30%), Gaps = 59/371 (15%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           +E     +     W +         N+        T     T  L+P    G    + + 
Sbjct: 176 DEKIVCPISGTTNWTEVRQ-----FNLMFATEVGSTADGASTIYLRPETAQGIFVNYLNV 230

Query: 352 LKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIH 408
            K+   +LP  +A+ G  +RNE   +   + R+R F Q +   F     E  + E  K  
Sbjct: 231 QKTGRMKLPFGIAQIGKAFRNEIV-ARQFIFRMREFEQMEMQYFVQPGTELEWFEYWKKL 289

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
            L       F           +           + A +I            +  +  G  
Sbjct: 290 RLHWHYALGFPQSDYRYHDHEKLAHYA------NAATDI------------EYLMPFGYK 331

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
             EG      F+                       S     Y +  +++ +   +     
Sbjct: 332 EVEGIHSRTDFDL----------------SRHEEFSGKKLRYYDPETKESYIPYVVETSI 375

Query: 529 GSIERFIGIMIENFKGNL------------PLWLSPIQAIVTTI--TSSAVEYAQEIANL 574
           G    F+ ++  ++K               P  L+P++  V  +       E A E+  L
Sbjct: 376 GVDRMFLSVLCGSYKEEQTESGETRVVLSLPPALAPVKLAVLPLVRKDGLDEKAHEVVRL 435

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           L     + + D ++ +I  + R       P  I    +   + ++ +R   +   +++++
Sbjct: 436 LH-LDFTCQYDEKD-SIGKRYRRQDAIGTPYCITVDHQTLEDNTVTLRDRDTMQQERIAI 493

Query: 635 LDAIPILTKES 645
            +   ++ + +
Sbjct: 494 AELHDLIAQRT 504


>gi|300771444|ref|ZP_07081319.1| glycine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861]
 gi|300761433|gb|EFK58254.1| glycine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861]
          Length = 489

 Score = 81.4 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 52/354 (14%), Positives = 111/354 (31%), Gaps = 61/354 (17%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+                 L+P    G    F +  K+   ++P  +A+ G  +RNE  
Sbjct: 167 FNLMFATQMGAMADGAEQVYLRPETAQGIFVNFLNVQKTGRMKIPFGIAQIGKAFRNEVI 226

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
            +   +MR+R F Q +   FC          K     +  +   GF     +        
Sbjct: 227 -ARQFIMRMREFEQMEMQFFCRPGTEMEWYNKWKETRLKWHLALGFNPDNYRYHDH---- 281

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIG-RDWQC 493
                             D + + +   ++              F +  K+  G      
Sbjct: 282 ------------------DKLAHYANAAVDIEFN----------FPFGFKEVEGIHSRTD 313

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG--------- 544
             ++       +   ++    ++   P +I  ++ G    F+ ++  +            
Sbjct: 314 FDLKQHQEFSKKKMQYFDTEINQNYIPYVIETSI-GLDRLFLTVLCNSLVQEDLSTDEKQ 372

Query: 545 ------NLPLWLSPIQAIVTTITSSAV--EYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                   P  L+P++A +  +T      E A+EI   LK    +++ D ++  I  + R
Sbjct: 373 DSRVVLKFPPALAPVKAAILPLTKKDGLPEKAREIMATLK-LDYNVQYDEKDA-IGKRYR 430

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDC 650
                  P  I    +   + ++ IR   +   ++V++ D       E +  D 
Sbjct: 431 RQDAIGTPFCITVDHQSLEDNTVTIRDRDTMKQERVAIADL------ERIVSDL 478


>gi|227488416|ref|ZP_03918732.1| glycyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51867]
 gi|227543028|ref|ZP_03973077.1| glycyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51866]
 gi|227091630|gb|EEI26942.1| glycyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51867]
 gi|227181250|gb|EEI62222.1| glycyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51866]
          Length = 461

 Score = 81.4 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 57/393 (14%), Positives = 121/393 (30%), Gaps = 31/393 (7%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIK---DDYEEINTPQVLDQHLWQQSGHWDSYRA 316
            D      +  K ++    L +Y  +      +   ++N P+      W +   +     
Sbjct: 86  HDPLVESLYTHKRYRADHLLEAYEEKHGHPAPNGLADVNDPETGQPGNWTEPRDFSGM-- 143

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPSG 375
                        +     L+P    G    F + L  S  +LP  +   G  +RNE + 
Sbjct: 144 ---LKTFLGPVDDEEGLHYLRPETAQGIFVNFKNVLTTSRAKLPFGIGNIGKSFRNEITP 200

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
             + + R R F Q +   F    +         +     Y D G +   ++L   P+   
Sbjct: 201 G-NFIFRTREFEQMEMEFFVKPGEDEKWHQYWIDTRHKWYTDLGIDPENLRLYEHPK--- 256

Query: 436 GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGT 495
                 +   +  K  +D            G L G       + ++ L   +    +   
Sbjct: 257 ------EKLSHYSKRTVDIEYAFGFQGSTWGELEGVAN----RTDFDLGTHMKHSGEDLR 306

Query: 496 IQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI---GIMIENFKGNLPLWLSP 552
              D     RF  + +   +     +M       + E      G         L   L+P
Sbjct: 307 -YFDQASGERFIPYVIEPAAGLGRAMMAFLVDAYAEEEVPNAKGGTDTRTVLRLDPRLAP 365

Query: 553 IQAIVTTIT--SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           ++  V  ++   +    A+EIA  L+ +  +++ D     I  + R       P  +   
Sbjct: 366 VKVAVLPLSKKDTLTPLAEEIAQTLRGY-WNVDYDTSGA-IGRRYRRQDEIGTPYCVTVD 423

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
                + ++ +R   +   ++V + +    L +
Sbjct: 424 FDSLEDHAVTVRDRDTMQQERVKIDELEGYLAQ 456


>gi|222873081|gb|EEF10212.1| predicted protein [Populus trichocarpa]
          Length = 264

 Score = 81.4 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 60/168 (35%), Gaps = 13/168 (7%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFK 543
           AI R  + G +  +        NA ++  + +   P +     +G  + R     IE   
Sbjct: 50  AIERGIEVGHVFYLGTKYSQAMNATFLAENGK---PSLFEMGCYGIGVTRLPAAAIEQNH 106

Query: 544 GN----LPLWLSPIQAIVTTI----TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
                  P  ++P   +V  I    +    E A+++   L +  + +  D R E      
Sbjct: 107 DERGIIWPDAIAPFTVVVCPIGMDRSEPVKEAAEKLHAELLALGVDVILDDRGERPGAMF 166

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +  +  +P  ++  D+   E  +  +    T   K++  D +  L +
Sbjct: 167 ADWELIGVPHRVVLSDRGLKEGQVEYQHRRDTEATKMAAADVLGHLKQ 214


>gi|291541481|emb|CBL14591.1| glycyl-tRNA synthetase [Ruminococcus bromii L2-63]
          Length = 458

 Score = 81.4 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 54/343 (15%), Positives = 108/343 (31%), Gaps = 50/343 (14%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    F++  + S +++P  +A+ G  +RNE +
Sbjct: 147 FNLMFKTFQGVTEDSKNEIYLRPETAQGIFVNFSNIQRTSRKKVPFGVAQIGKSFRNEIT 206

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
              + + RVR F Q +   FC    +  + E  +          +   E + ++  ++ E
Sbjct: 207 PG-NFIFRVREFEQMELEFFCKPGTDLEWFEYWRGFCRDWLYSLNIKEENLRLRDHSKEE 265

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
               S A  D                           G G  +G   +    D       
Sbjct: 266 LCFYSKATTD--------------------FEYLFPFGWGELWGVA-DRTDYDLTQHSKT 304

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP----- 547
            G           F+       +EK  P +I     G    F+ +++E +   +      
Sbjct: 305 SGK------TLEYFDPTT----NEKYIPYVIE-PSLGVERLFLALVVEAYDEEVIDEKDT 353

Query: 548 -------LWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
                    L+P +A V  ++    E A  +   L S     + D    +I  + R    
Sbjct: 354 RVVLRLHPTLAPYKACVLPLSKKLNEQAGNVYEQL-SADFMTDYDDAG-SIGKRYRRQDE 411

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              P  I    +   +  + +R   +   ++V++      + +
Sbjct: 412 IGTPFCITYDFESVDDGCVTVRDRDTMQQERVAIDKLNDYIAE 454


>gi|303238626|ref|ZP_07325159.1| glycyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
 gi|302593745|gb|EFL63460.1| glycyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
          Length = 462

 Score = 81.4 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 44/338 (13%), Positives = 103/338 (30%), Gaps = 50/338 (14%)

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEP 373
           + N+        T        L+P    G    F +  + S +++P  + + G  +RNE 
Sbjct: 150 KFNLMFKTFQGVTEDSKAEIFLRPETAQGIFVNFKNVQRTSRKKIPFGIGQIGKSFRNEI 209

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP 431
           +   +   R R F Q +   FC    +  + +  K +     +      + + ++   + 
Sbjct: 210 TPG-NFTFRTREFEQMELEFFCEPGKDLEWFDYWKNYCFNWLLNLGINQDSLKMRDHEKE 268

Query: 432 EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDW 491
           E    S+A  D             K         G+          + ++ LK       
Sbjct: 269 ELSHYSNATTDI----------EFKFPFGWGELWGIAD--------RTDFDLK------- 303

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK-------- 543
                       S+ +  Y +  + + +         G+    +  + + +         
Sbjct: 304 -------QHMTHSKDDLSYFDPTTNEKYVPYCIEPSLGADRVTLAFLCDAYDEEEVAEGD 356

Query: 544 ----GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
                +    ++P++  +  ++    + A ++   L       E D    +I  + R   
Sbjct: 357 VRVVLHFHPAIAPVKIAILPLSKKLGDDAYKVYEALTKK-YVCEYDETG-SIGKRYRRQD 414

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
               P  I        ++S+ IR   +    +V + D 
Sbjct: 415 EIGTPYCITFDFDSLEDKSVTIRDRDNMQQVRVKIEDL 452


>gi|167771139|ref|ZP_02443192.1| hypothetical protein ANACOL_02493 [Anaerotruncus colihominis DSM
           17241]
 gi|167666809|gb|EDS10939.1| hypothetical protein ANACOL_02493 [Anaerotruncus colihominis DSM
           17241]
          Length = 456

 Score = 81.4 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 53/336 (15%), Positives = 113/336 (33%), Gaps = 31/336 (9%)

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEP 373
           + N+        T        L+P    G    F +  ++  +++P  + + G  +RNE 
Sbjct: 139 KFNLMFKTFQGVTEDAKSELYLRPETAQGIFVNFMNVQRTTRKKVPFGVCQIGKSFRNEI 198

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
           +   + + R+R F Q +   FC  +          +   +     G  K  ++L      
Sbjct: 199 TPG-NFIFRIREFEQMELEFFCKPDTDLEWFQYWRSFCENWLLSLGMTKDNMRLR----- 252

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
                   D A+  +     +  + +   I      G G  +G   +    D +GR  + 
Sbjct: 253 --------DHAKEEL-----SFYSKATTDIEYLFPFGWGELWGIA-DRTDYD-LGRHGEH 297

Query: 494 GTIQVDFNLPSRFNAF--YVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK-----GNL 546
               +D+  P     +  YV   S     V +        E  +G   +  +       L
Sbjct: 298 SGKTLDYFDPETNERYVPYVVEPSLGADRVALAFLCDAYDEEVVGTDAKGKEDVRVVMRL 357

Query: 547 PLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPII 606
              L+P +A V  ++    E A +I   L +    ++ D    +I  + R       P+ 
Sbjct: 358 HPALAPYKACVLPLSKKLAEGAGKIYETL-AKEYMVDYDDAG-SIGKRYRRQDEIGTPVC 415

Query: 607 IICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           I    +  ++  + +R   +   +++++      L 
Sbjct: 416 ITYDFESETDGCVTVRDRDTMAQERIAIDSLCDYLK 451


>gi|160940874|ref|ZP_02088214.1| hypothetical protein CLOBOL_05766 [Clostridium bolteae ATCC
           BAA-613]
 gi|158436118|gb|EDP13885.1| hypothetical protein CLOBOL_05766 [Clostridium bolteae ATCC
           BAA-613]
          Length = 462

 Score = 81.4 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 48/325 (14%), Positives = 96/325 (29%), Gaps = 26/325 (8%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPS 374
            N+        T     T  L+P    G    F +  + S +++P  + + G  +RNE +
Sbjct: 151 FNLMFKTFQGVTEDAKSTVYLRPETAQGIFVNFKNVQRTSRKKVPFGIGQIGKSFRNEIT 210

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              +   R R F Q +   FC  +             I+  +  G +   ++      + 
Sbjct: 211 PG-NFTFRTREFEQMELEFFCKPDTDLEWFAYWKEFCINWLRSLGIKDDELRARDHSPEE 269

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           +   + +  A   +   L          I                +    D        G
Sbjct: 270 L---SFYSKATTDL-EYLFPFGWGELWGIA---------------DRTDYDLSQHQKVSG 310

Query: 495 T--IQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
                 D     R+  + +         V +        E  IG        +    ++P
Sbjct: 311 QDMSYFDDETKERYIPYVIEPSLGADR-VTLAFLCAAYDEEEIGEGDVRTVLHFHPAIAP 369

Query: 553 IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
           ++  V  ++    E A++I   L  +  + E D R   I  + R       P  I     
Sbjct: 370 VKVGVLPLSKKLNEGAEKIYTELSKY-FNCEFDDRGN-IGKRYRRQDEIGTPFCITYDFD 427

Query: 613 EASERSIGIRRFGSTTTQKVSLLDA 637
              + ++ +R   +    +V + D 
Sbjct: 428 SEEDHAVTVRDRDTMEQVRVPIADL 452


>gi|284030420|ref|YP_003380351.1| glycyl-tRNA synthetase [Kribbella flavida DSM 17836]
 gi|283809713|gb|ADB31552.1| glycyl-tRNA synthetase [Kribbella flavida DSM 17836]
          Length = 461

 Score = 81.4 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 56/383 (14%), Positives = 120/383 (31%), Gaps = 50/383 (13%)

Query: 280 ISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPM 339
             Y RRK K+  +E+   ++   +   ++   +    N            +     L+P 
Sbjct: 105 EDYARRKNKN-ADEVQLAEIACPNCGNKATFTEPRMFNGLLKTYLGPVESEEGLHYLRPE 163

Query: 340 NCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE 398
              G    F +    + ++ P  +A+ G  +RNE +   + + R R F Q +   F    
Sbjct: 164 TAQGIFVNFANVMGTARKKPPFGIAQVGKSFRNEITPG-NFIFRTREFEQMEMEFFVVPG 222

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNS 458
              +            Y   G     ++    P+         +   +  K  +D     
Sbjct: 223 SDEDWHEYWLKARWDWYVGLGLNPDNMRFYEHPQ---------EKLSHYSKRTVDIEYKF 273

Query: 459 SQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC 518
           +        L G            + +    D    +     +L      ++     E+ 
Sbjct: 274 NFGGKEFDELEG------------IANRTDFDLSTHSKHSGADLS-----YFDQEKGERW 316

Query: 519 HPVMIHRAVFGSIERFIGIMI----ENFKGN------------LPLWLSPIQAIVTTITS 562
            P +I     G     +  ++    E+   N                L+P++A V  ++ 
Sbjct: 317 TPYVIE-PAAGLTRNVLAFLLDAYTEDEAPNAKGGVDKRTVLRFDPRLAPVKAAVLPLSR 375

Query: 563 SAV--EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
           +A     A+++A  L+    +++ D     I  + R       P  I        + ++ 
Sbjct: 376 NADLSPKAKDLAAELRQS-WNVDFDDAGA-IGRRYRRQDEIGTPYCITVDFDTLEDHAVT 433

Query: 621 IRRFGSTTTQKVSLLDAIPILTK 643
           IR   S   ++V+L +    L +
Sbjct: 434 IRERDSMKQERVALTEVTGYLAQ 456


>gi|270308100|ref|YP_003330158.1| glycyl-tRNA synthetase [Dehalococcoides sp. VS]
 gi|270153992|gb|ACZ61830.1| glycyl-tRNA synthetase [Dehalococcoides sp. VS]
          Length = 445

 Score = 81.4 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 64/442 (14%), Positives = 136/442 (30%), Gaps = 88/442 (19%)

Query: 251 REMDLFHIAED---GSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEIN---TPQVLDQHL 304
           R   +F  +E     +    +   G ++ + +     R +  D +++       ++   +
Sbjct: 22  RRGFIFPSSEIYGGLNSCWDYGPLGVELKRNVKEAWWRYMVRDRDDVVGLDASIIMHPRV 81

Query: 305 WQQSGHWDSYRANMFAVKCADDTIK-----------------DLRTF------------- 334
           W+ SGH   +   M   K      +                 + R F             
Sbjct: 82  WEASGHVAGFSDPMVDCKNCKMRWRPTDLAEPKCPACGGELTESRQFNLMFKTFMGPVEE 141

Query: 335 -----ALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQ 388
                 L+P    G    F + L +  ++LP  +A+ G  +RNE + + + + R R F Q
Sbjct: 142 AANIVYLRPETAQGIFVNFENVLNTTRKKLPFGIAQIGKSFRNEIT-TGNFIFRSREFEQ 200

Query: 389 DDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIM 448
            +   F           +     ++ YK+ G     ++L         SD L   A+   
Sbjct: 201 MELEYFVKPGADDACLEEWTQYRLNWYKNLGMNPENLRLRAHR-----SDELAHYAKGC- 254

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
                         +    L G               A  RD+         +  S    
Sbjct: 255 ------YDVEYNFPMGWSELEG--------------IANRRDFDLTQ----HSKYSGKAL 290

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK-----------GNLPLWLSPIQAIV 557
            Y +  +++     +     G     +  +I+ +             +L   L+P +  V
Sbjct: 291 EYFDEETKEHFVPYVIEPSAGVERSTLAFLIDAYSEEPDKDEIRTVLHLHPALAPYKIAV 350

Query: 558 TTITSSAV--EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEAS 615
             ++   +  +YA++I   L+     +  D   ++I  + R       P  +    +   
Sbjct: 351 LPLSKKEILSDYARKIYADLRKC-WMVAYDDS-QSIGRRYRRQDEIGTPYCVTVDFQSLE 408

Query: 616 ERSIGIRRFGSTTTQKVSLLDA 637
           +  + IR   S    +V + + 
Sbjct: 409 DGMVTIRDRDSMGQIRVKVSEL 430


>gi|291563934|emb|CBL42750.1| glycyl-tRNA synthetase, dimeric type [butyrate-producing bacterium
           SS3/4]
          Length = 462

 Score = 81.4 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 45/337 (13%), Positives = 106/337 (31%), Gaps = 50/337 (14%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPS 374
            N+        T     T  L+P    G    F +  + S +++P  + + G  +RNE +
Sbjct: 151 FNLMFKTFQGVTEDAKNTVYLRPETAQGIFVNFKNVQRTSRKKVPFGIGQIGKSFRNEIT 210

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
              +   R R F Q +   FC    +  +    K +   I   +D G +   ++      
Sbjct: 211 PG-NFTFRTREFEQMELEFFCKPGTDLDWFAYWKQYC--IKWLQDLGIKPDEMRARDHSP 267

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
           + +     +  A   +   L          I       +   Y        +   G+D  
Sbjct: 268 EEL---CFYSKATTDL-EFLFPFGWGELWGI------ADRTDYDLT---QHQTVSGQDMS 314

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK--------- 543
                           ++ +  +EK  P +I     G+    +  +   +          
Sbjct: 315 ----------------YFDDEVNEKYIPYVIE-PSLGADRVTLAFLCSAYDEEELEGGDV 357

Query: 544 ---GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
               +    ++P++  +  ++    E A+++   L  +  + E D R   I  + R    
Sbjct: 358 RTVMHFHPAIAPVKVGILPLSKKLNEGAEKVYAELSKY-YNCEFDDRGN-IGKRYRRQDE 415

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
              P  +       ++ ++ +R   +    ++ + + 
Sbjct: 416 IGTPFCVTYDFDSETDGAVTVRDRDTMEQVRIPIAEL 452


>gi|289425072|ref|ZP_06426849.1| glycine--tRNA ligase [Propionibacterium acnes SK187]
 gi|295130509|ref|YP_003581172.1| glycine--tRNA ligase [Propionibacterium acnes SK137]
 gi|289154050|gb|EFD02738.1| glycine--tRNA ligase [Propionibacterium acnes SK187]
 gi|291377378|gb|ADE01233.1| glycine--tRNA ligase [Propionibacterium acnes SK137]
          Length = 481

 Score = 81.4 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 62/369 (16%), Positives = 117/369 (31%), Gaps = 54/369 (14%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           EE+N P   ++  W +         NM                 L+P    G    F + 
Sbjct: 141 EEVNCPNCGNKGQWTEPR-----DFNMMLKTYLGPVEDKSGLHYLRPETAQGIFVNFQNV 195

Query: 352 LKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
           L S  ++ P  +A+ G  +RNE +   + + R R F Q +   F              ++
Sbjct: 196 LTSARKKPPFGIAQTGKSFRNEITPG-NFIFRTREFEQMEMEFFVEPGTDEEWHQYWIDV 254

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
             + Y D G     ++    P+         +   +  K  +D          + G L G
Sbjct: 255 RTAWYTDLGINPDNLRHYEHPK---------EKLSHYSKRTVDVEYKFGFSGSDWGELEG 305

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
                  + ++ L +      +              +  Y +  + K +   +     G 
Sbjct: 306 IAN----RTDFDLGNHSRHSGK--------------DLSYYDQANNKRYLPYVIEPAAGL 347

Query: 531 IERFIGIM----IENFKGN------------LPLWLSPIQAIVTTIT--SSAVEYAQEIA 572
               +  M     E+   N            L   LSP++A V  ++  S     A+++A
Sbjct: 348 TRSLMAFMVDAYTEDEAPNAKGGVDKRTVLKLDPRLSPVKAAVLPLSRNSDLSPKARDLA 407

Query: 573 NLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
             L+ H  +++ D     I  + R       P  I        + ++ IR   +   Q+V
Sbjct: 408 ARLREH-WNVDFDDAQA-IGKRYRRQDEIGTPFCITVDFDSLEDDAVTIRERDTMAQQRV 465

Query: 633 SLLDAIPIL 641
           S+      L
Sbjct: 466 SIDKVEEYL 474


>gi|302385328|ref|YP_003821150.1| glycyl-tRNA synthetase [Clostridium saccharolyticum WM1]
 gi|302195956|gb|ADL03527.1| glycyl-tRNA synthetase [Clostridium saccharolyticum WM1]
          Length = 462

 Score = 81.4 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 47/335 (14%), Positives = 106/335 (31%), Gaps = 46/335 (13%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPS 374
            N+        T     T  L+P    G    F +  + S +++P  +A+ G  +RNE +
Sbjct: 151 FNLMFKTFQGVTEDAKNTVYLRPETAQGIFVNFKNVQRTSRKKIPFGIAQVGKSFRNEIT 210

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              +   R R F Q +   FC  E             I+  K  G +   +++    ++ 
Sbjct: 211 PG-NFTFRTREFEQMELEFFCEPETDLEWFAYWKEFCINWLKTLGIKDDEMRVRDHEKEE 269

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           +   + +  A + +   L          I                      A   D+   
Sbjct: 270 L---SFYSKATSDI-EFLFPFGWGELWGI----------------------ADRTDYDLT 303

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI------ENFKGNLPL 548
             Q         +  Y +   ++ +   +     G+    +  +       E  +G++  
Sbjct: 304 QHQNTSGQ----DLTYFDDEKKERYVPYVVEPSLGADRVTLAFLCAAYDEEEIAEGDVRT 359

Query: 549 WL------SPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            L      +P++  V  ++    + A+++   L  +  + E D R   I  + R      
Sbjct: 360 VLHFHPAIAPVKIGVLPLSKKLNDGAEKVYEELCKY-YNCEFDDRGN-IGKRYRRQDEIG 417

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
            P  +        + ++ +R   +    +V + + 
Sbjct: 418 TPFCVTYDFDSEEDFAVTVRDRDTMDQVRVPIAEL 452


>gi|319400901|gb|EFV89120.1| glycyl-tRNA synthetase [Staphylococcus epidermidis FRI909]
          Length = 463

 Score = 81.4 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 51/343 (14%), Positives = 105/343 (30%), Gaps = 49/343 (14%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    + +  +S  ++LP  + + G  +RNE +
Sbjct: 151 FNLMFKTFQGVTEDSTNELFLRPETAQGIFVNYKNVQRSMRKKLPFGIGQIGKSFRNEIT 210

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
              + + R R F Q +   FC   E++  +           +K F  E +     +    
Sbjct: 211 PG-NFIFRTREFEQMELEFFCKPGEEIEWQNY---------WKTFASEWLTDLNISEDNM 260

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
           R+      + +           K         G+          + +Y L+         
Sbjct: 261 RLRDHDEDELSHYSNATTDIEYKFPFGWGELWGIAS--------RTDYDLR--------- 303

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK---------- 543
              Q   +    F  ++    +EK  P  I     G+    +  + + +           
Sbjct: 304 ---QHSEHSGEDFK-YHDPETNEKYIPYCIE-PSLGADRVTLAFLCDAYAEEGVEGSKDA 358

Query: 544 ---GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
               +    L+P +A V  ++      A +I   L S   +I+ D   ++I  + R    
Sbjct: 359 RTVMHFHPALAPYKAAVLPLSKKLSSEAIKIFEQLSSS-FAIDFDES-QSIGKRYRRQDE 416

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              P  I        +  + +R   S    ++ + +    L  
Sbjct: 417 IGTPYCITFDFDSLEDNQVTVRDRDSMEQVRMPISELETFLAD 459


>gi|332299424|ref|YP_004441345.1| glycyl-tRNA synthetase [Porphyromonas asaccharolytica DSM 20707]
 gi|332176487|gb|AEE12177.1| glycyl-tRNA synthetase [Porphyromonas asaccharolytica DSM 20707]
          Length = 517

 Score = 81.4 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 55/372 (14%), Positives = 113/372 (30%), Gaps = 60/372 (16%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           +E     +     W +         N+        T +   T  L+P    G    + + 
Sbjct: 176 DEKIVCPISGTTNWTEVRQ-----FNLMFATEVGSTAEGASTIYLRPETAQGIFVNYLNV 230

Query: 352 LKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIH 408
            K+   +LP  +A+ G  +RNE   +   + R+R F Q +   F     E  + E  K  
Sbjct: 231 QKTGRMKLPFGIAQIGKAFRNEIV-ARQFIFRMREFEQMEMQYFVQPGTELEWFEYWKKL 289

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
            L       F           +           + A +I            +  +  G  
Sbjct: 290 RLHWHYALGFPQSDYRYHDHDKLAHYA------NAATDI------------EYLMPFGYK 331

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
             EG      F+                       S     Y +  +++ +   +     
Sbjct: 332 EVEGIHSRTDFDL----------------SRHEEFSGKKLRYYDPDTKESYVPYVVETSI 375

Query: 529 GSIERFIGIMIENFKGNL------------PLWLSPIQAIVTTI--TSSAVEYAQEIANL 574
           G    F+ ++  ++K               P  L+P++  V  +       E A E+  L
Sbjct: 376 GVDRMFLSVLCGSYKEEQTENGETRVVLSLPPALAPVKLAVLPLVRKDGLDEKAHEVVRL 435

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           L     + + D ++ +I  + R       P  I    +   + ++ +R   +   +++++
Sbjct: 436 LH-LDFTCQYDEKD-SIGKRYRRQDAIGTPYCITVDHQTLEDNTVTLRDRDTMQQERIAI 493

Query: 635 LDAIPILTKESL 646
             A+  L  E  
Sbjct: 494 S-ALHDLIAERT 504


>gi|312127540|ref|YP_003992414.1| glycyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
 gi|311777559|gb|ADQ07045.1| glycyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
          Length = 434

 Score = 81.4 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 69/450 (15%), Positives = 147/450 (32%), Gaps = 91/450 (20%)

Query: 251 REMDLFH---IAEDGSGVIFWHRKGWKIFQTLISYMRR---KIKDDYEEINTPQVLDQHL 304
           R   +F    I    +    +   G ++   +     +   +++DD   +++  +++  +
Sbjct: 13  RRGFIFQSSEIYGGLNSCWDYGPLGVEMKNNIKRLWWKANVQLRDDVVGLDSSILMNPKV 72

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA---VFNHGLKSY------ 355
           W+ SGH  ++   M   K      +  +    K   C G +    +FN   K++      
Sbjct: 73  WEASGHLSNFADPMADCKVCKKRWRVDQLQEYKCPECGGELTEARMFNLMFKTFMGPVED 132

Query: 356 ---------------------------RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQ 388
                                      ++LP  +A+ G  +RNE +   + + R R F Q
Sbjct: 133 ESAVVYLRPETAQGIFVNFVNVQQTMRKKLPFGIAQIGKSFRNEITPG-NFIFRTREFEQ 191

Query: 389 DDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIM 448
            +   F                 I+ Y   G  K  +++        G D L   A+  +
Sbjct: 192 MEIEYFVKPGTDEYWHKHWIEQRINWYYKLGIRKENLRVREH-----GKDELAHYAKACV 246

Query: 449 K-GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFN 507
               L  +  S  + I              + ++ L                    S  N
Sbjct: 247 DIEYLFPMGWSELEGI------------ANRTDFDLT--------------QHQKYSGEN 280

Query: 508 AFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK------------GNLPLWLSPIQA 555
             Y +  +++ +   +     G     +  +I+ ++             +L   ++P++A
Sbjct: 281 LTYFDDETKQRYIPYVIEPSAGVDRSLLAFLIDAYEYQQIDKDDFRVVLHLHPAIAPVKA 340

Query: 556 IV--TTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
            V         V+ A+EI N LK   + ++ D    +I  + R       P  I    + 
Sbjct: 341 AVFPLMKKEELVKKAREIYNELKYKWI-VQYDESG-SIGKRYRRQDEIGTPFGITVDYQT 398

Query: 614 ASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             + ++ IR   +    +V + + IP L +
Sbjct: 399 LEDETVTIRDRDTMEQVRVHIKEIIPYLEE 428


>gi|327330808|gb|EGE72554.1| glycine--tRNA ligase [Propionibacterium acnes HL097PA1]
          Length = 506

 Score = 81.0 bits (198), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 62/369 (16%), Positives = 117/369 (31%), Gaps = 54/369 (14%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           EE+N P   ++  W +         NM                 L+P    G    F + 
Sbjct: 166 EEVNCPNCGNKGQWIEPR-----DFNMMLKTYLGPVEDKSGLHYLRPETAQGIFVNFQNV 220

Query: 352 LKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
           L S  ++ P  +A+ G  +RNE +   + + R R F Q +   F              ++
Sbjct: 221 LTSARKKPPFGIAQTGKSFRNEITPG-NFIFRTREFEQMEMEFFVEPGTDEEWHQYWIDV 279

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
             + Y D G     ++    P+         +   +  K  +D          + G L G
Sbjct: 280 RTAWYTDLGINPDNLRHYEHPK---------EKLSHYSKRTVDVEYKFGFSGSDWGELEG 330

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
                  + ++ L +      +              +  Y +  + K +   +     G 
Sbjct: 331 IAN----RTDFDLGNHSRHSGK--------------DLSYYDQANNKRYLPYVIEPAAGL 372

Query: 531 IERFIGIM----IENFKGN------------LPLWLSPIQAIVTTIT--SSAVEYAQEIA 572
               +  M     E+   N            L   LSP++A V  ++  S     A+++A
Sbjct: 373 TRSLMAFMVDAYTEDEAPNAKGGVDKRTVLKLDPRLSPVKAAVLPLSRNSDLSPKARDLA 432

Query: 573 NLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
             L+ H  +++ D     I  + R       P  I        + ++ IR   +   Q+V
Sbjct: 433 ARLREH-WNVDFDDAQA-IGKRYRRQDEIGTPFCITVDFDSLEDDAVTIRERDTMAQQRV 490

Query: 633 SLLDAIPIL 641
           S+      L
Sbjct: 491 SIDKVEEYL 499


>gi|313886005|ref|ZP_07819743.1| glycine--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I]
 gi|312924535|gb|EFR35306.1| glycine--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I]
          Length = 517

 Score = 81.0 bits (198), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 55/372 (14%), Positives = 113/372 (30%), Gaps = 60/372 (16%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           +E     +     W +         N+        T +   T  L+P    G    + + 
Sbjct: 176 DEKIVCPISGTTNWTEVRQ-----FNLMFATEVGSTAEGASTIYLRPETAQGIFVNYLNV 230

Query: 352 LKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIH 408
            K+   +LP  +A+ G  +RNE   +   + R+R F Q +   F     E  + E  K  
Sbjct: 231 QKTGRMKLPFGIAQIGKAFRNEIV-ARQFIFRMREFEQMEMQYFVQPGTELEWFEYWKKL 289

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
            L       F           +           + A +I            +  +  G  
Sbjct: 290 RLHWHYALGFPQSDYRYHDHDKLAHYA------NAATDI------------EYLMPFGYK 331

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
             EG      F+                       S     Y +  +++ +   +     
Sbjct: 332 EVEGIHSRTDFDL----------------SRHEEFSGKKLRYYDPDTKESYVPYVVETSI 375

Query: 529 GSIERFIGIMIENFKGNL------------PLWLSPIQAIVTTI--TSSAVEYAQEIANL 574
           G    F+ ++  ++K               P  L+P++  V  +       E A E+  L
Sbjct: 376 GVDRMFLSVLCGSYKEEQTENGETRVVLSLPPALAPVKLAVLPLVRKDGLDEKAHEVVRL 435

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           L     + + D ++ +I  + R       P  I    +   + ++ +R   +   +++++
Sbjct: 436 LH-LDFTCQYDEKD-SIGKRYRRQDAIGTPYCITVDHQTLEDNTVTLRDRDTMQQERIAI 493

Query: 635 LDAIPILTKESL 646
             A+  L  E  
Sbjct: 494 S-ALHDLIAERT 504


>gi|253681235|ref|ZP_04862033.1| glycine--tRNA ligase [Clostridium botulinum D str. 1873]
 gi|253562473|gb|EES91924.1| glycine--tRNA ligase [Clostridium botulinum D str. 1873]
          Length = 463

 Score = 81.0 bits (198), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 53/339 (15%), Positives = 107/339 (31%), Gaps = 58/339 (17%)

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEP 373
           R N+        T        L+P    G    F +  + S +++P  + + G  +RNE 
Sbjct: 151 RFNLMFKTFQGVTEDTTSEIYLRPETAQGIFVNFKNAQRTSRKKVPFGIGQIGKSFRNEI 210

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP 431
           +   +   R R F Q +   FC    +  +    K +        D G  +  ++     
Sbjct: 211 TPG-NFTFRTREFEQMELEFFCKPGTDLEWFHYWKDYC--WKFLLDLGMTEENLRFRDHG 267

Query: 432 EKR----------------VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
           E+                  G   LW  A+     +   +++S Q+   T +       Y
Sbjct: 268 EEELSFYSNATSDIEFLFPFGWGELWGIADRTDYDLKKHMEHSGQE--LTYLDPTTNEKY 325

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
            P   Y+++ ++G D       VD              + +    + +H           
Sbjct: 326 VP---YVIEPSLGADRVALAFLVDAYDEEEL------ENGDTRTVLHLH----------- 365

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
                         L+P +A +  ++    E A E+   L     +I+ D    +I  + 
Sbjct: 366 ------------PALAPFKAAILPLSKKLSEKALEVYGKLSKK-FNIDYDEAG-SIGKRY 411

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           R       P  I        + ++ +R   + T  ++ +
Sbjct: 412 RREDEIGTPYCITVDFDTLQDNTVTVRDRDNMTQVRLKI 450


>gi|59798520|sp|Q6A964|SYG_PROAC RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
          Length = 472

 Score = 81.0 bits (198), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 62/369 (16%), Positives = 117/369 (31%), Gaps = 54/369 (14%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           EE+N P   ++  W +         NM                 L+P    G    F + 
Sbjct: 132 EEVNCPNCGNKGQWTEPR-----DFNMMLKTYLGPVEDKSGLHYLRPETAQGIFVNFQNV 186

Query: 352 LKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
           L S  ++ P  +A+ G  +RNE +   + + R R F Q +   F              ++
Sbjct: 187 LTSARKKPPFGIAQTGKSFRNEITPG-NFIFRTREFEQMEMEFFVEPGTDEEWHQYWIDV 245

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
             + Y D G     ++    P+         +   +  K  +D          + G L G
Sbjct: 246 RTAWYTDLGINPDNLRHYEHPK---------EKLSHYSKRTVDVEYKFGFSGSDWGELEG 296

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
                  + ++ L +      +              +  Y +  + K +   +     G 
Sbjct: 297 IAN----RTDFDLGNHSRHSGK--------------DLSYYDQANNKRYLPYVIEPAAGL 338

Query: 531 IERFIGIM----IENFKGN------------LPLWLSPIQAIVTTIT--SSAVEYAQEIA 572
               +  M     E+   N            L   LSP++A V  ++  S     A+++A
Sbjct: 339 TRSLMAFMVDAYTEDEAPNAKGGVDKRTVLKLDPRLSPVKAAVLPLSRNSDLSPKARDLA 398

Query: 573 NLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
             L+ H  +++ D     I  + R       P  I        + ++ IR   +   Q+V
Sbjct: 399 ARLREH-WNVDFDDAQA-IGKRYRRQDEIGTPFCITVDFDSLEDDAVTIRERDTMAQQRV 456

Query: 633 SLLDAIPIL 641
           S+      L
Sbjct: 457 SIDKVEEYL 465


>gi|297531631|ref|YP_003672906.1| glycyl-tRNA synthetase [Geobacillus sp. C56-T3]
 gi|297254883|gb|ADI28329.1| glycyl-tRNA synthetase [Geobacillus sp. C56-T3]
          Length = 460

 Score = 81.0 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 51/341 (14%), Positives = 102/341 (29%), Gaps = 46/341 (13%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    F +  ++  ++LP  +A+ G  +RNE +
Sbjct: 149 FNLMFKTYQGVTESSANEIYLRPETAQGIFVNFKNVQRTMRKKLPFGIAQIGKSFRNEIT 208

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              +   R R F Q +   FC   +                   G ++  ++L       
Sbjct: 209 PG-NFTFRTREFEQMELEFFCKPGEELQWLEYWKQFCKEWLLSLGMKEDNIRLRDHA--- 264

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
                         K  L    N++ D I      G G  +G             ++   
Sbjct: 265 --------------KEELSHYSNATTD-IEYHFPFGWGELWGIASRTDYDLKRHMEYSGE 309

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK----------- 543
                               +E+  P  I     G+    +  MI+ +            
Sbjct: 310 DFHYLDQ-----------ETNERYIPYCIE-PSLGADRVTLAFMIDAYDEEELEDGTTRT 357

Query: 544 -GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
             +L   L+P +A V  ++    + A+ I   L + H  ++ D    +I  + R      
Sbjct: 358 VMHLHPALAPYKAAVLPLSKKLADGARRIYEEL-AKHFMVDYDETG-SIGKRYRRQDEIG 415

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            P  I    +   +  + +R   +    ++ + +    L +
Sbjct: 416 TPFCITYDFESEQDGQVTVRDRDTMEQVRLPIGELKAFLEE 456


>gi|261420842|ref|YP_003254524.1| glycyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|319768511|ref|YP_004134012.1| glycyl-tRNA synthetase [Geobacillus sp. Y412MC52]
 gi|261377299|gb|ACX80042.1| glycyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|317113377|gb|ADU95869.1| glycyl-tRNA synthetase [Geobacillus sp. Y412MC52]
          Length = 460

 Score = 81.0 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 51/341 (14%), Positives = 102/341 (29%), Gaps = 46/341 (13%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    F +  ++  ++LP  +A+ G  +RNE +
Sbjct: 149 FNLMFKTYQGVTESSANEIYLRPETAQGIFVNFKNVQRTMRKKLPFGIAQIGKSFRNEIT 208

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              +   R R F Q +   FC   +                   G ++  ++L       
Sbjct: 209 PG-NFTFRTREFEQMELEFFCKPGEELQWLEYWKQFCKEWLLSLGMKEDNIRLRDHA--- 264

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
                         K  L    N++ D I      G G  +G             ++   
Sbjct: 265 --------------KEELSHYSNATTD-IEYHFPFGWGELWGIASRTDYDLKRHMEYSGE 309

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK----------- 543
                               +E+  P  I     G+    +  MI+ +            
Sbjct: 310 DFHYLDQ-----------ETNERYIPYCIE-PSLGADRVTLAFMIDAYDEEELEDGTTRT 357

Query: 544 -GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
             +L   L+P +A V  ++    + A+ I   L + H  ++ D    +I  + R      
Sbjct: 358 VMHLHPALAPYKAAVLPLSKKLADGARRIYEEL-AKHFMVDYDETG-SIGKRYRRQDEIG 415

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            P  I    +   +  + +R   +    ++ + +    L +
Sbjct: 416 TPFCITYDFESEQDGQVTVRDRDTMEQVRLPIGELKAFLEE 456


>gi|160895177|ref|ZP_02075950.1| hypothetical protein CLOL250_02737 [Clostridium sp. L2-50]
 gi|156863211|gb|EDO56642.1| hypothetical protein CLOL250_02737 [Clostridium sp. L2-50]
          Length = 469

 Score = 81.0 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 50/345 (14%), Positives = 109/345 (31%), Gaps = 51/345 (14%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPS 374
            N+        T     T  L+P    G    F +  + S +++P  + + G  +RNE +
Sbjct: 155 FNLMFKTFQGVTEDAKNTVYLRPETAQGIFVNFKNVQRTSRKKIPFGIGQIGKSFRNEIT 214

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              +   R R F Q +   FC             +  I+  KD G +   ++      + 
Sbjct: 215 PG-NFTFRTREFEQMELEFFCEPGTDLEWFDYWRSFCINWLKDLGIKDEEMRARDHSPEE 273

Query: 435 ----------------VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
                            G   LW  A+      L   +  S + ++      +  +    
Sbjct: 274 LCFYSKGTTDIEFLFPFGWGELWGIADRTDYD-LTQHQTVSGEPMDYFDDEKKEKY---- 328

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
             Y+++ ++G D           L + ++   + +  +     ++H              
Sbjct: 329 IPYVIEPSLGADRVTLAF-----LCAAYDEENIGTEEKPDVRTVLH-------------- 369

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
                      L+P++  V  ++    E A+++   L  +  + E D R   I  + R  
Sbjct: 370 -------FHPALAPVKIGVLPLSKKLGEEAEKVYAELCKY-YNCEYDDRGN-IGKRYRRQ 420

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
                P  +        + ++ +R   +   ++V + D      K
Sbjct: 421 DEIGTPFCVTYDFDSEEDGAVTVRDRDTMEQERVKIEDLKAYFEK 465


>gi|283796156|ref|ZP_06345309.1| glycine--tRNA ligase [Clostridium sp. M62/1]
 gi|291076375|gb|EFE13739.1| glycine--tRNA ligase [Clostridium sp. M62/1]
 gi|295092207|emb|CBK78314.1| glycyl-tRNA synthetase, dimeric type [Clostridium cf.
           saccharolyticum K10]
 gi|295115529|emb|CBL36376.1| glycyl-tRNA synthetase, dimeric type [butyrate-producing bacterium
           SM4/1]
          Length = 462

 Score = 81.0 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 45/335 (13%), Positives = 101/335 (30%), Gaps = 46/335 (13%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPS 374
            N+        T     T  L+P    G    F +  + S +++P  + + G  +RNE +
Sbjct: 151 FNLMFKTFQGVTEDAKNTVYLRPETAQGIFVNFKNVQRTSRKKIPFGIGQIGKSFRNEIT 210

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              +   R R F Q +   FC                I+  K  G +   ++      + 
Sbjct: 211 PG-NFTFRTREFEQMELEFFCEPGTDLEWFAYWKEFCINWLKTLGIKDDEMRARDHSPEE 269

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           +     +  A   +   L          I                      A   D+   
Sbjct: 270 L---CFYSKATTDL-EFLFPFGWGELWGI----------------------ADRTDYDLT 303

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI------ENFKGNLPL 548
             Q         +  Y +   ++ +   +     G+    +  +       E  +G++  
Sbjct: 304 QHQNTSGQ----DMTYFDDEKKEKYIPYVIEPSLGADRVTLAFLCSAYDEEEIGEGDVRT 359

Query: 549 WL------SPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            L      +P++  V  ++    E A+++   L  +  + E D R   I  + R      
Sbjct: 360 VLHFHPAIAPVKIGVLPLSKKLNEGAEKVYAELSKY-YNCEFDDRGN-IGKRYRRQDEIG 417

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
            P  +       ++ ++ +R   +    ++ + + 
Sbjct: 418 TPFCVTYDFDSETDGAVTVRDRDTMEQVRIPIAEL 452


>gi|312793587|ref|YP_004026510.1| glycyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii 177R1B]
 gi|312180727|gb|ADQ40897.1| glycyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii 177R1B]
          Length = 434

 Score = 81.0 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 68/450 (15%), Positives = 148/450 (32%), Gaps = 91/450 (20%)

Query: 251 REMDLFH---IAEDGSGVIFWHRKGWKIFQTLISYMRR---KIKDDYEEINTPQVLDQHL 304
           R   +F    I    +    +   G ++   +     +   +++DD   +++  +++  +
Sbjct: 13  RRGFIFQSSEIYGGLNSCWDYGPLGVEMKNNIKRLWWKANVQLRDDVVGLDSSILMNPKV 72

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA---VFNHGLKSY------ 355
           W+ SGH  ++   M   K      +  +    K   C G +    +FN   K++      
Sbjct: 73  WEASGHLSNFADPMADCKVCKKRWRVDQLQEYKCPECGGELTEARMFNLMFKTFMGPVED 132

Query: 356 ---------------------------RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQ 388
                                      ++LP  +A+ G  +RNE +   + + R R F Q
Sbjct: 133 ESAVVYLRPETAQGIFVNFINVQQTMRKKLPFGIAQIGKSFRNEITPG-NFIFRTREFEQ 191

Query: 389 DDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIM 448
            +   F                 I+ Y   G ++  +++        G D L   A+  +
Sbjct: 192 MEIEYFVKPGTDEQWHKHWIEQRINWYYKLGIKRENLRIREH-----GKDELAHYAKACV 246

Query: 449 K-GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFN 507
               L  +  S  + I              + ++ L                    S  N
Sbjct: 247 DIEYLFPMGWSELEGI------------ANRTDFDLT--------------QHQKYSGEN 280

Query: 508 AFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK------------GNLPLWLSPIQA 555
             Y +  +++ +   +     G     +  +I+ ++             +L   ++P++A
Sbjct: 281 LTYFDDETKQRYIPYVIEPSAGVDRSLLAFLIDAYEYQQIDKDDFRVVLHLHPAIAPVKA 340

Query: 556 IV--TTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
            V         V+ A+EI N LK   + ++ D    +I  + R       P  I    + 
Sbjct: 341 AVFPLMKKEELVKKAKEIYNELKYKWI-VQYDESG-SIGKRYRRQDEIGTPFGITVDYQT 398

Query: 614 ASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             + ++ IR   +    +V + + IP L +
Sbjct: 399 LEDETVTIRDRDTMEQVRVHIKEIIPYLEE 428


>gi|312622367|ref|YP_004023980.1| glycyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002]
 gi|312202834|gb|ADQ46161.1| glycyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002]
          Length = 434

 Score = 81.0 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 69/450 (15%), Positives = 148/450 (32%), Gaps = 91/450 (20%)

Query: 251 REMDLFH---IAEDGSGVIFWHRKGWKIFQTLISYMRR---KIKDDYEEINTPQVLDQHL 304
           R   +F    I    +    +   G ++   +     +   +++DD   +++  +++  +
Sbjct: 13  RRGFIFQSSEIYGGLNSCWDYGPLGVEMKNNIKRLWWKANVQLRDDVVGLDSSILMNPKV 72

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA---VFNHGLKSY------ 355
           W+ SGH  ++   M   K      +  +    K   C G +    +FN   K++      
Sbjct: 73  WEASGHLSNFADPMADCKICKKRWRVDQLQEYKCPECGGELTEARMFNLMFKTFMGPVED 132

Query: 356 ---------------------------RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQ 388
                                      ++LP  +A+ G  +RNE +   + + R R F Q
Sbjct: 133 ESAVVYLRPETAQGIFVNFVNVQQTMRKKLPFGIAQIGKSFRNEITPG-NFIFRTREFEQ 191

Query: 389 DDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIM 448
            +   F                 I+ Y + G  K  +++        G D L   A+  +
Sbjct: 192 MEIEYFVKPGTDEYWHKHWIEQRINWYYNLGIRKENLRVREH-----GKDELAHYAKACV 246

Query: 449 K-GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFN 507
               L  +  S  + I              + ++ L                    S  N
Sbjct: 247 DIEYLFPMGWSELEGI------------ANRTDFDLT--------------QHQKYSGEN 280

Query: 508 AFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK------------GNLPLWLSPIQA 555
             Y +  +++ +   +     G     +  +I+ ++             +L   ++P++A
Sbjct: 281 LTYFDDETKQRYIPYVIEPSAGVDRSLLAFLIDAYEYQQIDKDDFRVVLHLHPAIAPVKA 340

Query: 556 IV--TTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
            V         V+ A+EI N LK   + ++ D    +I  + R       P  I    + 
Sbjct: 341 AVFPLMKKEELVKKAREIYNELKYKWI-VQYDESG-SIGKRYRRQDEIGTPFGITVDYQT 398

Query: 614 ASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             + ++ IR   +    +V + + IP L +
Sbjct: 399 LEDETVTIRDRDTMEQVRVHIKEIIPYLEE 428


>gi|291167027|gb|EFE29073.1| glycine--tRNA ligase [Filifactor alocis ATCC 35896]
          Length = 463

 Score = 81.0 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 53/344 (15%), Positives = 109/344 (31%), Gaps = 50/344 (14%)

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEP 373
           + N+        T        L+P    G    F +  + S +++P  +A+ G  +RNE 
Sbjct: 151 KFNLMFKTFQGVTEDSTAEIFLRPETAQGIFVNFKNVQRTSRKKVPFGIAQIGKSFRNEI 210

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP 431
           +   +   R R F Q +   FC    +  + E  K +     +      + + ++     
Sbjct: 211 TPG-NFTFRTREFEQMELEFFCAPGEDLKWFEYWKEYCKNFLLSLGIQVDNLRLRDHAPE 269

Query: 432 EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDW 491
           E    S+A  D             K         G+          + ++ LK       
Sbjct: 270 ELSHYSNATTDF----------EYKFPFGWGELWGIAD--------RTDFDLK------Q 305

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK-------- 543
                 VD             + +EK  P  I     G+    +  +I+ +         
Sbjct: 306 HMEHSGVDMKYQD-------PTTNEKYIPYCIE-PSLGADRVTLAFLIDAYDEEELEDGT 357

Query: 544 ----GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
                     L+P +A V  +T    E A E+   L + + +++ D    +I  + R H 
Sbjct: 358 VRNVLRFHPALAPFKAAVLPLTKKLSEPATELFQDL-AKYFNVDYDETG-SIGKRYRRHD 415

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
               P  I        ++ + +R   +    ++ + +    + +
Sbjct: 416 EAGTPFCITFDFDSLEDKCVTVRDRDTMEQVRMPIAELKSYIEE 459


>gi|169824299|ref|YP_001691910.1| uridine kinase [Finegoldia magna ATCC 29328]
 gi|167831104|dbj|BAG08020.1| uridine kinase [Finegoldia magna ATCC 29328]
          Length = 540

 Score = 81.0 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 44/204 (21%), Positives = 87/204 (42%), Gaps = 7/204 (3%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCD-LSDPVREGSIEII 62
            IK+   +  I ++    T  D A  I        VA+  N K+ D +S      +IE +
Sbjct: 1   MIKI-INNNKIYDYEDK-TIYDYA--IKYGFEDSIVALK-NNKLVDIMSYVENGDTIEFV 55

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQI 122
             +   S   +  +   ++  A +  +P+ Q+ +   I D  Y +F+        +L +I
Sbjct: 56  NEKSVYSQDTLMQTGILLLLLAFKLKFPKDQLEVEYTIGDYMYLEFENNNEIHFKDLEEI 115

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
            K M ++I ++    +  +S ++A ++FE +    K  +L+S+  KE V LY+  + +  
Sbjct: 116 RKLMDDLINQNLRIERVKVSRKEAFDIFEKEGYIQKSRLLKSL-DKEEVYLYKCLDHYFG 174

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGA 206
             G     T  +K +  +    G 
Sbjct: 175 IEGFVAPYTRFLKHYKLINYFPGI 198


>gi|295102728|emb|CBL00273.1| glycyl-tRNA synthetase [Faecalibacterium prausnitzii L2-6]
          Length = 473

 Score = 81.0 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 52/350 (14%), Positives = 108/350 (30%), Gaps = 61/350 (17%)

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEP 373
           + N+        T     T  L+P    G    F +  ++  R+LP  + + G  +RNE 
Sbjct: 148 KFNLMFKTAIGVTEDSSSTCYLRPETAQGIFVNFANIQRTTRRKLPFGVCQVGKAFRNEI 207

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP 431
           +   +   R R F Q +   FC    +  +    K +    +     G +K  ++L    
Sbjct: 208 TPG-NFTFRTREFEQMECEFFCKPGTDLEWFSYWKDYC--ENWLLSLGIKKEHLRLRDHE 264

Query: 432 EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDW 491
              +   A +  A   ++             I                      A   ++
Sbjct: 265 PAEL---AFYSRATTDIEYAFPFTDWGELWGI----------------------ADRTNY 299

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK-------- 543
                Q       +   ++ +  +E   P +I     G     +  + E +         
Sbjct: 300 DLTRHQ---EASGKSLEYFDSETNEHYIPYVIE-PSLGCDRVALAFLCEAYDEEHLTDSK 355

Query: 544 --------GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
                    +L   L+P +  V  ++    + A EI N L  +   ++ D    +I  + 
Sbjct: 356 GKEDVRTVLHLHPALAPYKCAVLPLSKKLGDKAMEIRNELSKY-FMVDYDDTG-SIGKRY 413

Query: 596 REHSIKKIPIIIIC-----GDKE---ASERSIGIRRFGSTTTQKVSLLDA 637
           R       P  I       GD+    A++  + +R   +    ++ + + 
Sbjct: 414 RREDEIGTPYCITVDFDTVGDEAKGIAADNCVTVRDRDTMEQVRMPISEL 463


>gi|326381627|ref|ZP_08203321.1| glycyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
 gi|326199874|gb|EGD57054.1| glycyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
          Length = 461

 Score = 81.0 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 66/369 (17%), Positives = 122/369 (33%), Gaps = 25/369 (6%)

Query: 280 ISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF-ALKP 338
            +Y  +K  DD + +   ++         G W   +A    +K     + D      L+P
Sbjct: 104 EAYALKKGIDDPDTVPMSEIACPEC-GTKGQWTEPKAFSGLLKTFLGPVDDQEGLHYLRP 162

Query: 339 MNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK 397
               G    F +    + R+ P  +A+ G  +RNE +   + + R R F Q +   F   
Sbjct: 163 ETAQGIFVNFKNVMTTARRKPPFGIAQIGKSFRNEITPG-NFIFRTREFEQMEMEFFVKP 221

Query: 398 EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKN 457
            +         +   + Y D G +   ++L   P+         +   +  K  +D    
Sbjct: 222 GEDEEWHKYWIDARHNWYVDLGIDPENLRLYEHPK---------EKLSHYSKSTVDVEYK 272

Query: 458 SSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK 517
                   G L G             K A G D        D     RF  F +   +  
Sbjct: 273 FGFGGNPWGELEGVANRTDYDLSTHSK-ASGEDLS----FFDQASGERFTPFVIEPAAGL 327

Query: 518 CHPVMIHRAVFGSIERFI---GIMIENFKGNLPLWLSPIQAIVTTIT--SSAVEYAQEIA 572
              +M       + E      G         L   L+P++A V  ++        A+++A
Sbjct: 328 GRSMMAFLCDAYTEEEVPNAKGGTDTRTMLKLDRRLAPVKAAVLPLSRNEKLSPKARDLA 387

Query: 573 NLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
             L+ H  +IE D     I  + R       P  +        ++++ IR   + + ++V
Sbjct: 388 AELRKH-WNIEFDDAQG-IGKRYRRQDEIGTPFCVTVDFDTLDDQAVTIRERDTMSQERV 445

Query: 633 SLLDAIPIL 641
           +L   +  L
Sbjct: 446 ALDKVVEYL 454


>gi|289427082|ref|ZP_06428798.1| glycine--tRNA ligase [Propionibacterium acnes J165]
 gi|289159551|gb|EFD07739.1| glycine--tRNA ligase [Propionibacterium acnes J165]
          Length = 463

 Score = 81.0 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 62/369 (16%), Positives = 117/369 (31%), Gaps = 54/369 (14%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           EE+N P   ++  W +         NM                 L+P    G    F + 
Sbjct: 123 EEVNCPNCGNKGQWTEPR-----DFNMMLKTYLGPVEDKSGLHYLRPETAQGIFVNFQNV 177

Query: 352 LKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
           L S  ++ P  +A+ G  +RNE +   + + R R F Q +   F              ++
Sbjct: 178 LTSARKKPPFGIAQTGKSFRNEITPG-NFIFRTREFEQMEMEFFVEPGTDEEWHQYWIDV 236

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
             + Y D G     ++    P+         +   +  K  +D          + G L G
Sbjct: 237 RTAWYTDLGINPDNLRHYEHPK---------EKLSHYSKRTVDVEYKFGFSGSDWGELEG 287

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
                  + ++ L +      +              +  Y +  + K +   +     G 
Sbjct: 288 IAN----RTDFDLGNHSRHSGK--------------DLSYYDQANNKRYLPYVIEPAAGL 329

Query: 531 IERFIGIM----IENFKGN------------LPLWLSPIQAIVTTIT--SSAVEYAQEIA 572
               +  M     E+   N            L   LSP++A V  ++  S     A+++A
Sbjct: 330 TRSLMAFMVDAYTEDEAPNAKGGVDKRTVLKLDPRLSPVKAAVLPLSRNSDLSPKARDLA 389

Query: 573 NLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
             L+ H  +++ D     I  + R       P  I        + ++ IR   +   Q+V
Sbjct: 390 ARLREH-WNVDFDDAQA-IGKRYRRQDEIGTPFCITVDFDSLEDDAVTIRERDTMAQQRV 447

Query: 633 SLLDAIPIL 641
           S+      L
Sbjct: 448 SIDKVEEYL 456


>gi|297544412|ref|YP_003676714.1| glycyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|296842187|gb|ADH60703.1| glycyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 462

 Score = 81.0 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 54/391 (13%), Positives = 120/391 (30%), Gaps = 59/391 (15%)

Query: 277 QTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDS---------YRANMFAVKCADDT 327
           Q +  Y++ K  +   E  T + L + + +                 + N+        T
Sbjct: 103 QLIEDYIKEKELNISIEGWTNEQLMEFIKEHKVPCPKCGAHNFTNIRKFNLMFKTYQGVT 162

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
                   L+P    G    F +  ++  +++P  + + G  +RNE +   + + R R F
Sbjct: 163 EDSKSEVYLRPETAQGIFVNFKNVQRTTRKKIPFGIGQIGKSFRNEITPG-NFIFRTREF 221

Query: 387 TQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
            Q +   FC    +  +    + + +   +      E +  +   + E    S A  D  
Sbjct: 222 EQMELEFFCKPGEDMEWFNYWRKYCMDWLLEFGLKKENLRFRDHKKEELSHYSTATTD-- 279

Query: 445 ENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPS 504
                             I      G G  +G             +     +        
Sbjct: 280 ------------------IEYNFPFGWGELWGIANRTDFDLRQHMEHSGVDL-------- 313

Query: 505 RFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP------------LWLSP 552
              ++   +  EK  P  I     G     +  +I+ ++                  L+P
Sbjct: 314 ---SYMDPATGEKYIPYCIE-PSVGVDRLMLAFLIDAYEEEELENGETRVVLRLHPALAP 369

Query: 553 IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
           I+A V  ++    E A ++ + L++    ++ D    +I  + R       P  I     
Sbjct: 370 IKAAVLPLSKKLSENAYKLYDQLRNK-FVVDYDETG-SIGKRYRRQDEIGTPFCITYDFD 427

Query: 613 EASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             ++  + IR   +    ++ + +    L +
Sbjct: 428 SENDHCVTIRDRDTMEQVRIKIEEVEKYLEE 458


>gi|220929366|ref|YP_002506275.1| histidyl-tRNA synthetase [Clostridium cellulolyticum H10]
 gi|219999694|gb|ACL76295.1| histidyl-tRNA synthetase [Clostridium cellulolyticum H10]
          Length = 442

 Score = 81.0 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 70/451 (15%), Positives = 140/451 (31%), Gaps = 86/451 (19%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLW-QQSGHWDSYR 315
                 G +        +F  ++  +++  +   +  I+TP +    +   +SG      
Sbjct: 7   TPSILPGFMELLPADQIVFNNMLDIIKKTYEKYGFIPIDTPMIEKSEVLLAKSGGETE-- 64

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL--PVRLAEFGSVYRNEP 373
             ++     D+ +                V +  +  + + +L  P +    G V+R E 
Sbjct: 65  KQVYRFNKGDNDLSLRFDLT---------VPLARYVSQHFGDLTFPFKRYHIGKVFRGEK 115

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE- 432
                   R R F Q D  +   +        +I ++I S +K  GF+   ++++ R   
Sbjct: 116 PQK----GRFREFYQCDIDIIGNENLSLINDAEILSVIYSTFKALGFDDFTIRINNRKVL 171

Query: 433 ----------------------KRVGSDALWDD------AENIMKGVLDTIKNSSQDR-- 462
                                 +++GS  +  +      +E   + VLD +      R  
Sbjct: 172 NGFFEDLQVPDKTEVLRTIDKLEKIGSKEVLIELKSIGLSEENAQRVLDFVGTKGSCRDI 231

Query: 463 -------------INTGVLLGE------GAFYGP--KFEYILKDAIGRDWQCGTIQVDFN 501
                         N G+   E       +F  P   +   L  A G D+  GTI     
Sbjct: 232 IMHLKEMKVQNEMFNEGINEMELVVDYIDSFKVPSSNYMIDLTIARGLDYYTGTIYETVL 291

Query: 502 LPS----------RFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLS 551
                        R++       ++K   V I         R    + E          +
Sbjct: 292 NQYPSIGSVCSGGRYDNLAQKYTTKKLPGVGISIG----FSRLFYQLREAGILGEMKRAT 347

Query: 552 PIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
           P + +V  +    +  A EIA  ++   +S E  F    I  K        IP +I+ G+
Sbjct: 348 PSKILVIPMN-GTMGNALEIATKIRDEGVSAEIYFNEGKIGKKFSYADKLGIPYVIVVGE 406

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            E +     ++   +     +++   I  L 
Sbjct: 407 DEVNSGIYKLKDMATGEQTDLTVEQIIEKLK 437


>gi|198424783|ref|XP_002128963.1| PREDICTED: similar to mitochondrial ribosomal protein L39 [Ciona
           intestinalis]
          Length = 456

 Score = 81.0 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 43/303 (14%), Positives = 92/303 (30%), Gaps = 61/303 (20%)

Query: 21  ATGSDVAESISRSLAKKAVAVAI-------------------NGKV------------CD 49
           +T    A  I   +A  +V   +                   +G++             D
Sbjct: 125 STPYHCAMHIGTGVANSSVLAVVTPSDAQSNSTSVSKVETNHDGELVTTDPAKSEQLLWD 184

Query: 50  LSDPVR-EGSIEIITPE--------DPRSLAVIRHSCAHIMAEAVQSIWPEVQ------V 94
           +  P+  +  +E++             +       +C+ I+   VQ  + E Q      +
Sbjct: 185 IHSPLPFDCELELLKFTMNNSLQWQHEQVNKAYWRTCSVILGAVVQEAFKENQKIGLLKI 244

Query: 95  AIGPIIEDGFYYDF-----DKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKAREL 149
               +    F YD       ++     ++L  + K  + II+++  F K  +  E     
Sbjct: 245 PEISVKSGAFCYDLLLDPGMRDWEAREEDLVFMSKVARRIISKNLKFEKLEM--EAGIAT 302

Query: 150 FESKKEAYKV----EILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAG 205
              ++E  K+    E+LE      ++ +YR GE+ D+  GP + +T           V  
Sbjct: 303 EIFQEEEQKLNTIAELLEKNGQDSSIPVYRFGEYMDVIEGPLISNTS----HIFHYIVTA 358

Query: 206 AYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGV 265
            +           +        +   + +      + K     L    DL         +
Sbjct: 359 LHQVSKETNTWRIQGLSLPEELKLHHSVWSVLENRARKLVREDLPENCDLGVDNSKRFNM 418

Query: 266 IFW 268
             +
Sbjct: 419 HRY 421


>gi|308234686|ref|ZP_07665423.1| glycyl-tRNA synthetase [Gardnerella vaginalis ATCC 14018]
          Length = 506

 Score = 81.0 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 57/379 (15%), Positives = 114/379 (30%), Gaps = 48/379 (12%)

Query: 278 TLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALK 337
            L      K  D   E     +       +    +    NM           +     L+
Sbjct: 102 KLEESYAEKHGDKMPENGLKDIACPDCGTRGNWTEPRDFNMMLRTHLGPVEDENSLHYLR 161

Query: 338 PMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT 396
           P    G    F +    + ++ P  +A  G  +RNE +   + + R R F Q +   F  
Sbjct: 162 PETAQGIFVDFKNVMTATRQKPPFGIANIGKSFRNEITPG-NFIFRTREFEQMEMEFFVE 220

Query: 397 KEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIK 456
                       +  ++ Y D G +   +++   P+         +   +  K  +D   
Sbjct: 221 PGTDEAWHQYWIDTRVNWYVDLGVKPENLRMYEHPK---------EKLSHYSKRTVDIEY 271

Query: 457 NSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE 516
                  + G L G            + +    D          +L      ++  +  E
Sbjct: 272 KFGFQGSDWGELEG------------IANRTDYDLSAHAKHSGEDLS-----YFNQATGE 314

Query: 517 KCHPVMIHRAVFGSIERFIGIMIENFK----------------GNLPLWLSPIQAIVTTI 560
           K  P +I     G     +  +++ +                   L   L+P++A V  +
Sbjct: 315 KYVPYVIE-PAAGLTRSLMAFLVDAYDVDEAPNTKGGVDKRTVLRLDPRLAPVKAAVLPL 373

Query: 561 TSSAV--EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERS 618
           +        AQ++A  L+ H   I+ D     I  + R       P+ +        + +
Sbjct: 374 SKKPELQAVAQDLAADLRQHDWVIDYDESGA-IGRRYRREDEIGTPLCVTVDFDTLEDHA 432

Query: 619 IGIRRFGSTTTQKVSLLDA 637
           + IR   +   ++VSL   
Sbjct: 433 VTIRERDTMQQERVSLDKV 451


>gi|254383750|ref|ZP_04999099.1| histidyl-tRNA synthetase [Streptomyces sp. Mg1]
 gi|194342644|gb|EDX23610.1| histidyl-tRNA synthetase [Streptomyces sp. Mg1]
          Length = 433

 Score = 81.0 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 61/437 (13%), Positives = 138/437 (31%), Gaps = 78/437 (17%)

Query: 268 WHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADD 326
           +      + Q +  ++   ++   Y   + P +    +++           +   +    
Sbjct: 16  FLPAEMSVRQQVFGHLYETVERYGYGRYDGPILESAEIYEAKS-----GQEIANQQLYSL 70

Query: 327 TIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
           T +  R  AL+P   P    +      S  + PVR     + +R E         R R  
Sbjct: 71  TDRGGRRIALRPEMTPSVARMIAANAGSL-QFPVRWYSHVNCHRYERPQR----GRTREH 125

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
            Q +  +F +        ++I +LI  +    G  + M         RVG  A+ +   +
Sbjct: 126 WQLNVDIFGSDSPNCE--IEIFDLIHDVMGSLGATRDMW------VLRVGDRAILN---S 174

Query: 447 IMKGVLDTIKNSS---------QDRINTGVLLGEGAFYGP---KFEYI------------ 482
           I++ V+   +++           +++    L  + A +G     F+ +            
Sbjct: 175 ILRDVVKVPESAHQQTMALIDRWEKVPAEKLREDAAEFGVDGRMFDLLESTLRSGAEVLP 234

Query: 483 -LKDAIGRDWQCGTI-----------------QVDFNLPSRFNAFYVNSHSEK---CHPV 521
            L D +        +                  + +   + F  F ++  + +       
Sbjct: 235 DLPDEVREASPLAQVMKSEAKDLFVFDPFIVRGLQYYTSTVFEVFDLSPENNRSLFGGGR 294

Query: 522 MIHRAVFGSIERFIGIMIE----------NFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
               A   + +R  GI             +  G LP   + +   V  +    +  ++E+
Sbjct: 295 YGDLAGLFTNQRIPGIGFGMGDVTLHDFLDTHGLLPEAKNEVDVAVIPVDDELIPASREV 354

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
           A  L+   +   T      +  ++           +I G  E   +++ +R        +
Sbjct: 355 ARTLRQAGIRTSTTLEPRKLGKELSRADRSGAGFAVIVGRDEWQRQAVVLRDLKGAAQHE 414

Query: 632 VSLLDAIPILTKESLPP 648
           ++L D +  LT E L P
Sbjct: 415 IALADVVAHLT-ERLAP 430


>gi|300788441|ref|YP_003768732.1| glycyl-tRNA synthetase [Amycolatopsis mediterranei U32]
 gi|299797955|gb|ADJ48330.1| glycyl-tRNA synthetase [Amycolatopsis mediterranei U32]
          Length = 462

 Score = 81.0 bits (198), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 49/346 (14%), Positives = 113/346 (32%), Gaps = 48/346 (13%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPS 374
            NM           +     L+P    G    F++    S ++ P  + + G  +RNE +
Sbjct: 140 FNMMLKTYLGPVESEEGLAYLRPETAQGIFVNFSNVQTTSRKKPPFGIGQIGKSFRNEIT 199

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              + + R R F Q +   F    +         +     Y D G +   ++    P+++
Sbjct: 200 PG-NFIFRTREFEQMEMEFFVEPGEDERWHQYWIDERTKWYTDLGIKADNLRHYEHPKEK 258

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           +        +    + V    + +       G L G            + +    D    
Sbjct: 259 L--------SHYAKRTVDIEYRFAFNAGQEWGELEG------------IANRTDFDLTTH 298

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK----------- 543
           +     +L      F+  +  ++  P +I     G     +  +++++            
Sbjct: 299 SNHSGQDLS-----FFDQASGQRYRPFVIE-PAAGVGRSMMAFLVDSYVEEEVPNAKGGT 352

Query: 544 -----GNLPLWLSPIQAIVTTITSSAV--EYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                  L   LSP +  V  ++ +A     A+E+A  L+ H  +++ D     I  + R
Sbjct: 353 DTRVVLRLDPRLSPFKVAVLPLSRNADLTPKAKEVAATLRKH-WNVDFDDAQA-IGRRYR 410

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
                  P  +        ++++ +R   S + +++++      L 
Sbjct: 411 RQDEIGTPYCVTVDFDSLEDQAVTVRERDSMSQERIAIDKLESYLA 456


>gi|320334724|ref|YP_004171435.1| glycyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
 gi|319756013|gb|ADV67770.1| glycyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
          Length = 504

 Score = 81.0 bits (198), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 60/341 (17%), Positives = 113/341 (33%), Gaps = 20/341 (5%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            NM        T  +     L+P    G    F + + S  R LP  +A+ G  +RNE +
Sbjct: 166 FNMMFKTTIGPTADEDSYGYLRPETAQGIFTNFKNVVDSTSRRLPFGIAQIGKAFRNEIT 225

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
              + + RVR   Q +   FC    ++ ++E      L     +    EKI +    + +
Sbjct: 226 PR-NFIFRVRELEQMEIEFFCAPGTDEDWHEHWLQARLAWWAAQGVPREKIQILDVPKED 284

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
               S   +D   +      + I+  + +R +  +     A      +  +++ +    +
Sbjct: 285 LAHYSKRTYDLMYDYPTLGYEEIEGIA-NRSDYDLGSHTKAQGELGIQARVEENLDSVAK 343

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
                 D N P      +V   S      M+        +  +    E     L   L+P
Sbjct: 344 LTIPHPDTNKPV---VPFVIEPSAGVDRAMLAVLSEAYTKETLENGSERIVLKLKPHLAP 400

Query: 553 IQAIVTTIT---SSAVEYAQEIANLLKSHH-LSIETDFRNETINYKIREHSIKKIPIIII 608
           I+  V  +       V  A+ +   L+      I  +     I    R H     P  + 
Sbjct: 401 IKVAVIPLARNREEIVSVAKSVKADLQKLGLGRILFEDSGN-IGKAYRRHDEVGTPFCVT 459

Query: 609 C-------GDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
                   G+ EA   ++ +R   +   ++V + D    LT
Sbjct: 460 VDFDTVGKGEDEALVDTVTVRDRDTLAQERVKISDLAAYLT 500


>gi|261749646|ref|YP_003257332.1| glycyl-tRNA synthetase [Blattabacterium sp. (Periplaneta americana)
           str. BPLAN]
 gi|261497739|gb|ACX84189.1| glycyl-tRNA synthetase [Blattabacterium sp. (Periplaneta americana)
           str. BPLAN]
          Length = 487

 Score = 81.0 bits (198), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 76/472 (16%), Positives = 164/472 (34%), Gaps = 37/472 (7%)

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           +     G  +++  +   +  + ++       DS+  M S I+  + + ++     +   
Sbjct: 35  YDYGPHGIELKNNIKKYWWKSMTQLHENIVGLDSSILMHSEIWRASGHIEKFNELLIDNK 94

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQ 298
           +  ++     L RE   F      +     +RK  +I   L   +++K   D   +   +
Sbjct: 95  DSKKRYSPEVLIREHINFMQKAPKTSKFIKNRKN-EILSRLEKSIKKKDLLD-IRVLIDE 152

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA-VFNHGLKSYRE 357
           +        S +W + R+     K  ++         L+P    G  +  F+    S ++
Sbjct: 153 LNISDPLCGSNNWTNIRSFNMMFKIKEEKG----DLFLRPETAQGIFSNFFSVKKSSRKK 208

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMF--NECLKIHNLIISIY 415
           +P  +A+ G  +RNE   +   L R+R F Q +   F   E+     E  K   L   + 
Sbjct: 209 IPFGIAQIGKSFRNEI-MARQFLFRMREFEQMEMQFFILPEEEMKWYEYWKKIRLKWHLE 267

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
            + G +K  ++          + A  +         ++ I +     +          F+
Sbjct: 268 LNLGDKKYQLRNHDHLAHYASAGADIEFHFPFGFKEIEGIHSRRDFDLK------RHEFF 321

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
             K   + +D +  +     +        RF     +S  +K         +    ER +
Sbjct: 322 SKKKLRVFRDNL--ENYIPYVIETSLGLDRFFLAIYSSSLKKEK-------LDNGKERVV 372

Query: 536 GIMIENFKGNLPLWLSPIQAIV--TTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
                     +P  LSP++A +    +     E A++I   LK     +  D + E+I  
Sbjct: 373 --------LKIPPCLSPVKAAIFPLVLKDGLPEIAKKIFQNLK-IDYRLVYDQK-ESIGK 422

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
             R       PI         ++ ++ +R   S   ++V + +   I+ KE+
Sbjct: 423 LYRRQDAIGTPICFTIDYDTINDDTVTMRYRDSMLQKRVPIKEISKIIEKET 474


>gi|326201903|ref|ZP_08191773.1| histidyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
 gi|325987698|gb|EGD48524.1| histidyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
          Length = 442

 Score = 81.0 bits (198), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 71/453 (15%), Positives = 143/453 (31%), Gaps = 86/453 (18%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLW-QQSGHWDSYR 315
                 G +        +F  ++  +++  +   +  ++TP +    +   +SG      
Sbjct: 7   TPSILPGFMELLPADQIVFNNMLDTIKKTYEKYGFIPLDTPMIEKSEVLLAKSGGETE-- 64

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL--PVRLAEFGSVYRNEP 373
             ++     D+ +                V +  +  + + +L  P +    G V+R E 
Sbjct: 65  KQVYRFNKGDNDLSLRFDLT---------VPLARYVSQHFGDLTFPFKRYHIGKVFRGEK 115

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE- 432
                   R R F Q D  +   +        +I ++I S +K  GF+   ++++ R   
Sbjct: 116 PQK----GRFREFYQCDIDIIGNENLSVINDAEILSVIYSTFKALGFDDFTIRINNRKVL 171

Query: 433 ----------------------KRVGSDALWDDAENIM------KGVLDTIKNSSQDR-- 462
                                 +++G++A+  + E I       + VLD +      R  
Sbjct: 172 NGFFEGLQVSDKTEVLRTIDKLEKIGNEAVLKELEAIGLSKENSQRVLDFVGTKGSCRDI 231

Query: 463 -------------INTGVLLGE------GAFYGP--KFEYILKDAIGRDWQCGTIQVDFN 501
                         N G+   E       +F  P   +   L  A G D+  GTI     
Sbjct: 232 IKHLREMNFQNEMFNEGIDELELVVNYIDSFKVPSANYTIDLTIARGLDYYTGTIYETVL 291

Query: 502 LPS----------RFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLS 551
                        R++       ++K   V I   +     R    + E          +
Sbjct: 292 NRYPSIGSVCSGGRYDNLAQKYTTKKLPGVGISIGL----SRLFYQLREAGILGEMKRAT 347

Query: 552 PIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
           P + +V  +    +  A EIA  ++   +S E  F    I  K        IP +I+ G+
Sbjct: 348 PSEILVIPMN-GTMGNALEIATKIRDEGVSAEIYFNEGKIGKKFSYADKLGIPYVIVVGE 406

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            E       ++   +     +S+   I  L  +
Sbjct: 407 DEVKSGIFKLKDMATGEQADLSVEQIIEKLKAQ 439


>gi|229827512|ref|ZP_04453581.1| hypothetical protein GCWU000182_02901 [Abiotrophia defectiva ATCC
           49176]
 gi|229788450|gb|EEP24564.1| hypothetical protein GCWU000182_02901 [Abiotrophia defectiva ATCC
           49176]
          Length = 462

 Score = 81.0 bits (198), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 50/335 (14%), Positives = 102/335 (30%), Gaps = 46/335 (13%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    F +  + S +++P  + + G  +RNE +
Sbjct: 151 FNLMFKTFQGITEDSKAVVYLRPETAQGIFVNFKNVQRTSRKKIPFGIGQIGKSFRNEIT 210

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              +   R R F Q +   FC                       G ++  ++L     + 
Sbjct: 211 PG-NFTFRTREFEQMELEFFCEPGTDMEWFHYWRQFCKDWLISLGMKEEEMRLRDHDPEE 269

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           +                  +  +     I      G G  +G         A   D+  G
Sbjct: 270 L------------------SFYSKGTTDIEFLFPFGWGELWGI--------ADRTDYDLG 303

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI------ENFKGN--- 545
             Q     P      Y +   ++ +   +     G+    +  +       E   G+   
Sbjct: 304 RHQEISGEP----MEYFDDEKKEKYIPYVVEPSLGADRVTLAFLCGAYDEEELEGGDVRT 359

Query: 546 ---LPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
                 +L+P++  V  ++    E A+++   L S   + E D R   I  + R      
Sbjct: 360 VLRFHPFLAPVKVAVLPLSKKLGEGAEKVFAEL-SKDWNCEYDDRGA-IGKRYRRQDEIG 417

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
            P  I       ++  + +R   S   ++V++ + 
Sbjct: 418 TPFCITYDFDSETDGMVTVRDRDSMEQERVAISEL 452


>gi|172041003|ref|YP_001800717.1| glycyl-tRNA synthetase [Corynebacterium urealyticum DSM 7109]
 gi|171852307|emb|CAQ05283.1| glycyl-tRNA synthetase [Corynebacterium urealyticum DSM 7109]
          Length = 459

 Score = 81.0 bits (198), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 65/351 (18%), Positives = 118/351 (33%), Gaps = 38/351 (10%)

Query: 307 QSGHWDSYRANMFAVKCADDTIKDLRTFAL-KPMNCPGHVAVFNHGLKSYRELP-VRLAE 364
           Q G W   RA    +K     + D    A  +P    G    F + + S R+ P   +A+
Sbjct: 128 QPGKWTEPRAFSGLMKTYLGPVDDKEGLAYLRPETAQGIFTQFKNVMNSSRQKPPFGIAQ 187

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
            G  +RNE +   + + R R F Q +   F                 ++ Y + G ++  
Sbjct: 188 IGKSFRNEITPG-NFIFRTREFEQMEMEFFVEPGTDEEWQEYWIEQRLNWYVNLGIDREN 246

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG--AFYGPKF--- 479
           ++L          D L   A    K  +D            G L G      Y  K    
Sbjct: 247 LRLREHT-----EDELSHYA----KRTVDVEYAFHFTGSKWGELEGIANRTDYDLKTHSE 297

Query: 480 ----EYILKDAIGRDWQCG-TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
               +    D    +      I+    L     AF V++++E+  P        G+  R 
Sbjct: 298 GSGEDLSYYDQQKEERWIPYVIEPAAGLGRSLMAFLVDAYTEEEVPNAKG----GTDTRT 353

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAV--EYAQEIANLLKSHHLSIETDFRNETIN 592
           +          L   LSP++  V  ++        A++IA+ L+    +I+ D     I 
Sbjct: 354 V--------LKLDPRLSPVKVAVLPLSKKETLTPTAEKIADKLRGL-WNIDYDTSGA-IG 403

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            + R       P  +        + ++ +R   +   ++VS+ +    L +
Sbjct: 404 RRYRRQDEIGTPYCVTVDFDTLEDNAVTVRERDTMEQERVSIDELEGYLAQ 454


>gi|224476673|ref|YP_002634279.1| glycyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus
           TM300]
 gi|254781880|sp|B9DNL1|SYG_STACT RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|222421280|emb|CAL28094.1| putative glycyl-tRNA synthetase [Staphylococcus carnosus subsp.
           carnosus TM300]
          Length = 463

 Score = 80.6 bits (197), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 50/344 (14%), Positives = 110/344 (31%), Gaps = 51/344 (14%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    + +  +S  ++LP  + + G  +RNE +
Sbjct: 151 FNLMFKTFQGVTEDSTNEIFLRPETAQGIFVNYKNVQRSMRKKLPFGIGQIGKSFRNEIT 210

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
              + + R R F Q +   FC    E  +    K          D G +   ++L    E
Sbjct: 211 PG-NFIFRTREFEQMELEFFCKPGEEIEWQNYWKT--FAEKWLLDLGIKNDSIRLRDHDE 267

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
             +   + + +A   +       K         G+          + +Y LK        
Sbjct: 268 DEL---SHYSNATTDI-----EYKFPFGWGELWGIAS--------RTDYDLK-------- 303

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK--------- 543
               Q        F  ++    +EK  P  I     G+    +  + + +          
Sbjct: 304 ----QHSEFSGDDFK-YHDPETNEKYIPYCIE-PSLGADRVTLAFLCDAYDREGVEGSKD 357

Query: 544 ----GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
                +    ++P +A V  ++    E A ++   L  +  +++ D   ++I  + R   
Sbjct: 358 ERTVLHFHPAIAPYKAAVLPLSKKLSEEAIKVYEQLSEN-FTVDFDES-QSIGKRYRRQD 415

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
               P  I        ++ + +R   S    ++ + +    +++
Sbjct: 416 EIGTPYCITFDFDSLEDQQVTVRDRDSMEQVRMPISELNDFISE 459


>gi|209736970|gb|ACI69354.1| Mitochondrial 39S ribosomal protein L39 [Salmo salar]
          Length = 343

 Score = 80.6 bits (197), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 52/258 (20%), Positives = 96/258 (37%), Gaps = 29/258 (11%)

Query: 3   SDIKLTFP----DGSIKNFPVHA-TGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE- 56
             I++T       G++        T    A  ++      +    ++GK   L  P+ + 
Sbjct: 51  EKIEVTLQIPGLQGTLLVMNKGVSTPHSCARHLTEWYVTSSALALVDGKPWPLHQPLTQS 110

Query: 57  GSIEIITPEDPRSLAV---IRHSCAHIMAEAVQSIWPE------VQVAIGPIIEDGFYYD 107
            S+ ++T +D     V      SCA ++ + +Q  + E      ++V    +    F  D
Sbjct: 111 CSLSLLTFKDSDPQMVNQAYWRSCAALLGQVLQDAFKEDFSVELLRVPEVLVTSGAFCCD 170

Query: 108 FDKEQP-----FSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL 162
              +        S + L  + +  Q++I RD P+    ++   A E         K E +
Sbjct: 171 VVLDPQLDAWNPSEESLRSLTRGAQQLIHRDLPWEPLEVAPPVALE--AFSHSRCKQEEV 228

Query: 163 ESIPA---KENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSR 219
           E   A   K  V LYR G+   L  GP V  TG   ++    +V   +  G+    +  R
Sbjct: 229 EEKSAQSPKGTVMLYRCGDHVLLSGGPLVARTGLCSQY----EVTAIHPLGEGEWGLHRR 284

Query: 220 IYGTAWNTQQELTQYLYF 237
             G +   QQ+    ++ 
Sbjct: 285 AQGLSLPLQQQAHHTVWR 302


>gi|303241216|ref|ZP_07327723.1| glycyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
 gi|302591227|gb|EFL60968.1| glycyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
          Length = 460

 Score = 80.6 bits (197), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 57/347 (16%), Positives = 106/347 (30%), Gaps = 53/347 (15%)

Query: 307 QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR-ELPVRLAEF 365
           +S   D  + N+        T +   T  L+P N  G    F + L++ R +LP  + + 
Sbjct: 137 KSNLTDIRKFNLMFSTQCGSTQETSNTIYLRPENAQGEYVNFLNVLRTMRTKLPFSIGQI 196

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT--KEQMFNECLKIHNLIISIYKDFGFEKI 423
           G  +RNE +       R   F Q +   FC    ++   E  K + +    +     E +
Sbjct: 197 GKAFRNEITKGKFTF-RTIEFEQMEYQTFCKQGDDEALYEYFKDYGIKFFEFIGLSKEHL 255

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
             +   +                  K   D      +     G     G      F+   
Sbjct: 256 QFRDHKKLAHYA-------------KAACDI-----EYLFPFGWGEINGTHNRTDFD--- 294

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
                       +Q       +   ++    +EK  P +I    +G     + ++ E+  
Sbjct: 295 ------------LQRHQEFSGKNMEYFDTETNEKYIPYVIEST-YGLDRLVLAVLFESLL 341

Query: 544 ------------GNLPLWLSPIQAIVTT-ITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
                         +   L+PI+  V   I     E AQEI N LK +   +  D     
Sbjct: 342 EEELENGETRQVLKIKPSLAPIKVNVLPLIKKRHAEKAQEIYNELKKY-FMVSYDDAGN- 399

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
           I  + R       P  +   D      ++ +R   +     +++   
Sbjct: 400 IGKRYRRGDAIGTPYSVTIDDTTLDNNTVTVRERNTMHQVTITVDKL 446


>gi|330878004|gb|EGH12153.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str. race
           4]
          Length = 162

 Score = 80.6 bits (197), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 26/160 (16%), Positives = 59/160 (36%), Gaps = 13/160 (8%)

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NFKGNLPLW- 549
               Q+            +  + +   PV +    +G  + R +   IE N   N  +W 
Sbjct: 1   GHIWQLGTKYSEAMKCQVLGENGK---PVNLAMGCYGIGVSRVVAAAIEQNSDENGIIWN 57

Query: 550 --LSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNET--INYKIREHSIKK 602
             L+P Q  +  +   T +  E   ++   L +    +  D R++      K  +  +  
Sbjct: 58  DTLAPFQIALIPLRYETDAVREATDKLYAELTAAGFEVLLDDRDKKTSPGIKFADMELIG 117

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           IP  I+  D+  +E ++  +    +  Q +++ D +  + 
Sbjct: 118 IPHRIVVSDRGLAEGNLEYKSRTESQPQAIAVADVLSFIQ 157


>gi|72161265|ref|YP_288922.1| glycyl-tRNA synthetase [Thermobifida fusca YX]
 gi|123747241|sp|Q47RL8|SYG_THEFY RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|71914997|gb|AAZ54899.1| glycyl-tRNA synthetase [Thermobifida fusca YX]
          Length = 462

 Score = 80.6 bits (197), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 53/314 (16%), Positives = 108/314 (34%), Gaps = 23/314 (7%)

Query: 336 LKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           L+P    G    + +    S R++P  +A+ G  +RNE +   + + R R F Q +   F
Sbjct: 161 LRPETAQGIFINYKNVEQSSRRKIPFGIAQIGKSFRNEITPG-NFIFRTREFEQMEVEFF 219

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDT 454
                         +  +  Y D G  K  ++L   P+         +   +  K  +D 
Sbjct: 220 VRPGTDEEWHQYWIDTRLQWYIDLGINKDNLRLYEHPK---------EKLSHYSKRTVDI 270

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH 514
               +      G L G       + +Y L     R     +   D    +RF  + +   
Sbjct: 271 EYRFNFAGSEWGELEGIAN----RTDYDLSTHSKRSGTDLS-YFDQETNTRFIPYVIEPS 325

Query: 515 SEKCHPVM---IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAV--EYAQ 569
           +     ++   +            G M +     L   L+P++A V  ++ +A     A+
Sbjct: 326 AGVDRTMLTFLLDAYTEDEAPNAKGKMEKRVVMRLDPRLAPVKAAVLPLSRNADLSPKAR 385

Query: 570 EIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           ++A  L+    ++E D     I  + R       P  +        + ++ +R   S   
Sbjct: 386 DLAAKLRKR-WNVEFDDAGA-IGRRYRRQDEIGTPFCVTIDFDTLEDNAVTVRERDSMAQ 443

Query: 630 QKVSLLDAIPILTK 643
           +++S+      L +
Sbjct: 444 ERISIDQVEQYLAE 457


>gi|227495136|ref|ZP_03925452.1| glycine--tRNA ligase [Actinomyces coleocanis DSM 15436]
 gi|226831588|gb|EEH63971.1| glycine--tRNA ligase [Actinomyces coleocanis DSM 15436]
          Length = 474

 Score = 80.6 bits (197), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 61/395 (15%), Positives = 128/395 (32%), Gaps = 61/395 (15%)

Query: 277 QTLISYMRRKIKDD----YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
             +  Y  +K   +     + I  P   ++  W +   +                  +  
Sbjct: 115 NLVEEYAEKKGVAEEDVTMDVIACPNCGNRGQWTEPRAFSG-----LLKTFLGPVDDESG 169

Query: 333 TFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
              ++P    G    F + + S  R+ P  + + G  +RNE +   + + R R F Q + 
Sbjct: 170 LHYMRPETAQGIFVNFANVMTSARRKPPFGIGQIGKSFRNEITPG-NFIFRTREFEQMEL 228

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
             F              +  ++ Y D G +   ++L   P+                   
Sbjct: 229 EFFVAPGTDEEWHQYWIDERLAWYTDLGIDPEHLRLYEHPQ------------------- 269

Query: 452 LDTIKNSSQDRINTGVLLG-EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFY 510
            + + + S+  ++     G +G+ +G      L+    R     +   + +       ++
Sbjct: 270 -EKLSHYSKRTVDIEYTFGFQGSEWG-----ELEGIANRTDYDLSTHAEASGSK--LDYF 321

Query: 511 VNSHSEKCHPVMIHRAVFGSIERFIGIMIE--------NFKG--------NLPLWLSPIQ 554
               +E+  P +I     G     +  +IE        N KG         L   L+P++
Sbjct: 322 DQEKNERWTPYVIE-PSAGLTRSLMAFLIEAYCEDEAPNAKGGIDTRVVLKLDPRLAPVK 380

Query: 555 AIVTTIT--SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
             V  ++        A+E+A  L+    ++E D     +  + R       P  I     
Sbjct: 381 VAVLPLSKKEELATPAKELAAELRKR-WNVEYDEAGA-VGRRYRRQDEIGTPFCITYDFD 438

Query: 613 EASERSIGIRRFGSTTTQKVSLLDAIPILTKESLP 647
              + ++ IR   +    +V L + +  L  E LP
Sbjct: 439 SLEDGAVTIRDRDTMEQVRVKLDEVVSYL-NERLP 472


>gi|229828494|ref|ZP_04454563.1| hypothetical protein GCWU000342_00556 [Shuttleworthia satelles DSM
           14600]
 gi|229793088|gb|EEP29202.1| hypothetical protein GCWU000342_00556 [Shuttleworthia satelles DSM
           14600]
          Length = 465

 Score = 80.6 bits (197), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 55/459 (11%), Positives = 131/459 (28%), Gaps = 74/459 (16%)

Query: 192 GQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAR 251
             +++  + + + GA             +   +         +  F  +    D    A+
Sbjct: 52  KFIQESPQNVGIDGAILMNPQTWVASGHLGSFSDPLMDCKECHERFRADKIIED---FAQ 108

Query: 252 EMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHW 311
           E  +   +                 + +  +++         +  P     +  +     
Sbjct: 109 EHQIVLPSSVDGWSN----------KEMEDWIQEHN------VPCPSCGKHNFTEIRQFN 152

Query: 312 DSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYR 370
             ++      + A +T+       L+P    G    F +  + S +++P  + + G  +R
Sbjct: 153 LMFKTFQGVTEDAKNTV------YLRPETAQGIFVNFKNVQRTSRKKIPFGIGQIGKSFR 206

Query: 371 NEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR 430
           NE +   +   R R F Q +   FC                       G  K  ++L   
Sbjct: 207 NEITPG-NFTFRTREFEQMELEFFCEPGTDMEWFHYWRGFCRDWLLSLGMNKDHIRLRDH 265

Query: 431 PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRD 490
            ++ +                  +  +     I      G G  +G   +    D     
Sbjct: 266 DKEEL------------------SFYSKGTTDIEYTFPFGWGELWGIA-DRTDYDLTRHQ 306

Query: 491 WQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK------- 543
              G             +++ ++ +EK  P +I     G+    +  + E +        
Sbjct: 307 EVSGAD----------MSYFDDAKNEKYIPYVIE-PSLGADRVVLAFLCEAYDEENIGTE 355

Query: 544 --------GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
                    +    L+P++  V  ++    E A +I   L     + E D R   I  + 
Sbjct: 356 DKPDMRTVLHFHPALAPVKVGVLPLSKKLAEGATKIYERLSKK-FNCEYDDRGN-IGKRY 413

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           R       P  +       ++ ++ +R   S    ++ +
Sbjct: 414 RRQDEIGTPFCVTYDFDSETDGAVTVRDRDSMEQVRLPI 452


>gi|161344096|ref|YP_399468.2| seryl-tRNA synthetase [Synechococcus elongatus PCC 7942]
 gi|161621818|ref|YP_171779.2| seryl-tRNA synthetase [Synechococcus elongatus PCC 6301]
 gi|146345525|sp|Q8GMR7|SYS_SYNE7 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
          Length = 428

 Score = 80.6 bits (197), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 35/239 (14%), Positives = 75/239 (31%), Gaps = 20/239 (8%)

Query: 215 PMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED----GSGVIFWHR 270
                +  +    ++        + E E   H ++   + LF          S  +    
Sbjct: 113 DETVPLGSSEDENREIHRWGDDRIREGEFAPHWEIGERLGLFDFERSTRIAQSRFVTLLG 172

Query: 271 KGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
            G  + + LI++M  R+    Y E+  P +++      SG    +    F          
Sbjct: 173 AGAALERALIAFMLDRQTAAGYTEVAPPYLINSASLTASGQLPKFSEESFRC-------- 224

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGF 386
           D     L P       +++   + S  +LP+R   +   +R E         GL+R+  F
Sbjct: 225 DRDDLWLTPTAEVPLTSLYRDEILSADQLPLRYCAYTPCFRREAGSYGRDTRGLIRLHQF 284

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALW 441
            + + + F   +       ++     +I +        ++L T              +W
Sbjct: 285 NKVELYQFVHPDHSEAAHQQLLANAEAILQALELPYRTIELCTGDLGFSAQKTYDIEVW 343


>gi|24414814|emb|CAD55627.1| serine-tRNA ligase [Synechococcus elongatus PCC 7942]
          Length = 438

 Score = 80.6 bits (197), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 35/239 (14%), Positives = 75/239 (31%), Gaps = 20/239 (8%)

Query: 215 PMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED----GSGVIFWHR 270
                +  +    ++        + E E   H ++   + LF          S  +    
Sbjct: 128 DETVPLGSSEDENREIHRWGDDRIREGEFAPHWEIGERLGLFDFERSTRIAQSRFVTLLG 187

Query: 271 KGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
            G  + + LI++M  R+    Y E+  P +++      SG    +    F          
Sbjct: 188 AGAALERALIAFMLDRQTAAGYTEVAPPYLINSASLTASGQLPKFSEESFRC-------- 239

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGF 386
           D     L P       +++   + S  +LP+R   +   +R E         GL+R+  F
Sbjct: 240 DRDDLWLTPTAEVPLTSLYRDEILSADQLPLRYCAYTPCFRREAGSYGRDTRGLIRLHQF 299

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALW 441
            + + + F   +       ++     +I +        ++L T              +W
Sbjct: 300 NKVELYQFVHPDHSEAAHQQLLANAEAILQALELPYRTIELCTGDLGFSAQKTYDIEVW 358


>gi|56686037|dbj|BAD79259.1| seryl-tRNA synthetase [Synechococcus elongatus PCC 6301]
 gi|81168141|gb|ABB56481.1| seryl-tRNA synthetase [Synechococcus elongatus PCC 7942]
          Length = 443

 Score = 80.6 bits (197), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 35/239 (14%), Positives = 75/239 (31%), Gaps = 20/239 (8%)

Query: 215 PMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED----GSGVIFWHR 270
                +  +    ++        + E E   H ++   + LF          S  +    
Sbjct: 128 DETVPLGSSEDENREIHRWGDDRIREGEFAPHWEIGERLGLFDFERSTRIAQSRFVTLLG 187

Query: 271 KGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
            G  + + LI++M  R+    Y E+  P +++      SG    +    F          
Sbjct: 188 AGAALERALIAFMLDRQTAAGYTEVAPPYLINSASLTASGQLPKFSEESFRC-------- 239

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGF 386
           D     L P       +++   + S  +LP+R   +   +R E         GL+R+  F
Sbjct: 240 DRDDLWLTPTAEVPLTSLYRDEILSADQLPLRYCAYTPCFRREAGSYGRDTRGLIRLHQF 299

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALW 441
            + + + F   +       ++     +I +        ++L T              +W
Sbjct: 300 NKVELYQFVHPDHSEAAHQQLLANAEAILQALELPYRTIELCTGDLGFSAQKTYDIEVW 358


>gi|256085393|ref|XP_002578906.1| mitochondrial 39S ribosomal protein L39 [Schistosoma mansoni]
 gi|238664294|emb|CAZ35144.1| mitochondrial 39S ribosomal protein L39, putative [Schistosoma
           mansoni]
          Length = 324

 Score = 80.6 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 49/273 (17%), Positives = 93/273 (34%), Gaps = 34/273 (12%)

Query: 13  SIKNFPVH-ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPR-- 68
           S        +T  D A+ +S  L K++V   +N    D++ P+  + S++    +DP   
Sbjct: 65  STLEMTKGISTPLDCAKHLSEILVKESVIAMVNNTPWDMNRPLSCDCSLDFAQFKDPHYD 124

Query: 69  ---SLAVIRHSCAHIMAEAVQSIWPE------VQVAIGPIIEDGFYYDFD--------KE 111
              +      SC  ++A  +++ + E      + + +      GF  D          + 
Sbjct: 125 PTIANNAFWQSCTLLLAATLETAFHEKHNVRVINLPLLNPKSGGFVCDISFSPGHQSLEN 184

Query: 112 QPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENV 171
              S  EL  +   +Q + A D  F    +S               + + +  +  K   
Sbjct: 185 WKPSPQELYALNTYIQRMAADDLSFEPLDVSIHSELLQKLFADNPLRSQQINHVFNK--- 241

Query: 172 TLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQEL 231
               Q  +     GP +RSTG + K          Y RG SN  +  R+ G A  +    
Sbjct: 242 ---HQDIFT---NGPLIRSTGLIGKISISSFSRIGYLRGSSNNIVY-RVQGVAIPSAFLT 294

Query: 232 TQYLYFLEESEKRDHRKLAREMDLFHIAEDGSG 264
               +          +    E+D++    + S 
Sbjct: 295 ---HFTTFHRLMEWSKLPNSEVDIYPDYVEPSP 324


>gi|212550514|ref|YP_002308831.1| glycyl-tRNA synthetase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
 gi|212548752|dbj|BAG83420.1| glycyl-tRNA synthetase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
          Length = 515

 Score = 80.6 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 61/338 (18%), Positives = 108/338 (31%), Gaps = 54/338 (15%)

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEP 373
           R N+        T        L+P    G  A F +  KS   ++P  +A+ G  +RNE 
Sbjct: 194 RFNLMFSTKIGSTADAKMEIYLRPETAQGIFANFLNVQKSGRMKIPFGIAQIGKAFRNEI 253

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP 431
             +   + R+R F Q +   F     E  + E  K   +        G  K       R 
Sbjct: 254 V-TRQFIFRMREFEQMEMQFFVRPGEEFQWFERWKQIRMKWHKALGLGNHKYRFHDHNRL 312

Query: 432 EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDW 491
                     + A +I            +  +  G    EG     + ++   D    + 
Sbjct: 313 AHYA------NAATDI------------EFEMPFGFKEVEGIH--SRTDF---DLNNHEK 349

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM-----IENFKG-- 544
             G          RF    +   ++   P +I  ++ G    F+ I+      E  KG  
Sbjct: 350 YSGK-------KIRFFDPNI---NKSYVPYVIETSI-GLDRIFLSILAGSYCKEILKGKD 398

Query: 545 -----NLPLWLSPIQAIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
                 LP  L+P++  +  +       E A+EI + LK      + D ++ +I  + R 
Sbjct: 399 SRVVLKLPPALAPVKLAILPLVRKDGFPEKAREIMDQLKVS-FRCQYDEKD-SIGKRYRR 456

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
                 P              + IR   +   + +S+ 
Sbjct: 457 QDAIGTPYCATIDQNTLDHDQLTIRSRDTMEQEHISID 494


>gi|167037771|ref|YP_001665349.1| glycyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|167039989|ref|YP_001662974.1| glycyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|256751965|ref|ZP_05492835.1| glycyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
 gi|300914079|ref|ZP_07131395.1| glycyl-tRNA synthetase [Thermoanaerobacter sp. X561]
 gi|307724688|ref|YP_003904439.1| glycyl-tRNA synthetase [Thermoanaerobacter sp. X513]
 gi|320116186|ref|YP_004186345.1| glycyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
 gi|166854229|gb|ABY92638.1| glycyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|166856605|gb|ABY95013.1| glycyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|256749170|gb|EEU62204.1| glycyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
 gi|300889014|gb|EFK84160.1| glycyl-tRNA synthetase [Thermoanaerobacter sp. X561]
 gi|307581749|gb|ADN55148.1| glycyl-tRNA synthetase [Thermoanaerobacter sp. X513]
 gi|319929277|gb|ADV79962.1| glycyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
          Length = 462

 Score = 80.6 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 54/391 (13%), Positives = 120/391 (30%), Gaps = 59/391 (15%)

Query: 277 QTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDS---------YRANMFAVKCADDT 327
           Q +  Y++ K  +   E  T + + + + +                 + N+        T
Sbjct: 103 QLIEDYIKEKGLNISIEGWTNEQMMEFIKEHKVSCPKCGAHNFTDIRKFNLMFKTYQGVT 162

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
                   L+P    G    F +  ++  +++P  + + G  +RNE +   + + R R F
Sbjct: 163 EDSKSEVYLRPETAQGIFVNFKNVQRTTRKKIPFGIGQIGKSFRNEITPG-NFIFRTREF 221

Query: 387 TQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
            Q +   FC    +  +    + + +   +      E +  +   + E    S A  D  
Sbjct: 222 EQMELEFFCKPGEDMEWFSYWRKYCMDWLLEFGLKEENLRFRDHKKEELSHYSTATTD-- 279

Query: 445 ENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPS 504
                             I      G G  +G             +     + + +  P 
Sbjct: 280 ------------------IEYNFPFGWGELWGIANRTDFDLRQHMEHS--GVDLSYMDPV 319

Query: 505 RFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP------------LWLSP 552
                      EK  P  I     G     +  +I+ ++                  L+P
Sbjct: 320 T---------GEKYIPYCIE-PSVGVDRLMLAFLIDAYEEEELEDGETRVVLRLHPALAP 369

Query: 553 IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
           I+A V  ++    E A ++ + L++    ++ D    +I  + R       P  I     
Sbjct: 370 IKAAVLPLSKKLSENAYKLYDQLRNK-FVVDYDETG-SIGKRYRRQDEIGTPFCITYDFD 427

Query: 613 EASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             ++  + IR   +    ++ + +    L +
Sbjct: 428 SENDHCVTIRDRDTMQQVRIKIEEVEKYLEE 458


>gi|56421965|ref|YP_149283.1| glycyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
 gi|81675673|sp|Q5KUC1|SYG_GEOKA RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|56381807|dbj|BAD77715.1| glycyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
          Length = 460

 Score = 80.6 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 53/343 (15%), Positives = 103/343 (30%), Gaps = 50/343 (14%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    F +  ++  ++LP  +A+ G  +RNE +
Sbjct: 149 FNLMFKTYQGVTESSANEIYLRPETAQGIFVNFKNVQRTMRKKLPFGIAQIGKSFRNEIT 208

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
              +   R R F Q +   FC    E  + +  K            G ++  ++L     
Sbjct: 209 PG-NFTFRTREFEQMELEFFCKPGEELQWFDYWK--QFCKDWLLSLGMKEDNIRLRDHA- 264

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
                           K  L    N++ D I      G G  +G             ++ 
Sbjct: 265 ----------------KEELSHYSNATTD-IEYHFPFGWGELWGIASRTDYDLKRHMEYS 307

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK--------- 543
                                 +E+  P  I     G+    +  MI+ +          
Sbjct: 308 GEDFHYLDQ-----------ETNERYIPYCIE-PSLGADRVTLAFMIDAYDEEELEDGTT 355

Query: 544 ---GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
               +L   L+P +A V  ++    + A  I   L  H   ++ D    +I  + R    
Sbjct: 356 RTVMHLHPALAPYKAAVLPLSKKLADGAHRIYEELVKH-FMVDYDETG-SIGKRYRRQDE 413

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              P  I    +   +  + +R   +    ++ + +    L +
Sbjct: 414 IGTPFCITYDFESEQDGQVTVRDRDTMEQVRLPIGELKAFLEE 456


>gi|289578137|ref|YP_003476764.1| glycyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
 gi|289527850|gb|ADD02202.1| glycyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
          Length = 462

 Score = 80.6 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 56/391 (14%), Positives = 120/391 (30%), Gaps = 59/391 (15%)

Query: 277 QTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDS---------YRANMFAVKCADDT 327
           Q +  Y++ K  +   E  T + L + + +                 + N+        T
Sbjct: 103 QLIEDYIKEKELNISIEGWTNEQLMEFIKEHKVPCPKCGAHNFTNIRKFNLMFKTYQGVT 162

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
                   L+P    G    F +  ++  +++P  + + G  +RNE +   + + R R F
Sbjct: 163 EDSKSEVYLRPETAQGIFVNFKNVQRTTRKKIPFGIGQIGKSFRNEITPG-NFIFRTREF 221

Query: 387 TQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
            Q +   FC    +  +    + + +   +      E +  +   + E    S A  D  
Sbjct: 222 EQMELEFFCKPGEDMEWFNYWRKYCMDWLLEFGLKKENLRFRDHKKEELSHYSTATTD-- 279

Query: 445 ENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPS 504
                             I      G G  +G             +     + + +  P 
Sbjct: 280 ------------------IEYNFPFGWGELWGIANRTDFDLRQHMEHS--GVDLSYMDPV 319

Query: 505 RFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP------------LWLSP 552
                      EK  P  I     G     +  +I+ ++                  L+P
Sbjct: 320 T---------GEKYIPYCIE-PSVGVDRLMLAFLIDAYEEEELEDGETRVVLRLHPALAP 369

Query: 553 IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
           I+A V  ++    E A ++ + L++    ++ D    +I  + R       P  I     
Sbjct: 370 IKAAVLPLSKKLSENAYKLYDQLRNK-FVVDYDETG-SIGKRYRRQDEIGTPFCITYDFD 427

Query: 613 EASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             ++  + IR   +    +V + +    L +
Sbjct: 428 SENDHCVTIRDRDTMEQVRVKIEEVEKYLEE 458


>gi|323464340|gb|ADX76493.1| glycyl-tRNA synthetase [Staphylococcus pseudintermedius ED99]
          Length = 464

 Score = 80.6 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 51/344 (14%), Positives = 101/344 (29%), Gaps = 51/344 (14%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    + +  +S  ++LP  + + G  +RNE +
Sbjct: 152 FNLMFKTFQGVTEDSTNEIFLRPETAQGIFVNYKNVQRSMRKKLPFGIGQIGKSFRNEIT 211

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
              + + R R F Q +   FC    E  +    K              E   ++     E
Sbjct: 212 PG-NFIFRTREFEQMELEFFCKPGTEIEWQNYWKDFAANWLESLGLAKENTRLRDHDEDE 270

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
               S+A  D                    I      G G  +G       +        
Sbjct: 271 LSHYSNATTD--------------------IEYRFPFGWGELWG----IASRTDFDLKKH 306

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI-----ENFKGNLP 547
                 DF       +++    +EK  P  I     G+    +  +      E  +GN  
Sbjct: 307 SEHSGEDF-------SYHDPETNEKYIPYCIE-PSLGADRVTLAFLCDAYDEEGVEGNKD 358

Query: 548 --------LWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
                     ++P +A V  ++      A ++   L      ++ D   ++I  + R   
Sbjct: 359 ARTVLHFHPAIAPYKAAVLPLSKKLSADAIKVYEQLSE-DFVVDFDES-QSIGKRYRRQD 416

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
               P  I        ++ + +R   +    ++ + +    L +
Sbjct: 417 EIGTPYCITFDFDSLEDQQVTVRDRDTMEQVRMPISELNAFLAE 460


>gi|332297427|ref|YP_004439349.1| glycyl-tRNA synthetase [Treponema brennaborense DSM 12168]
 gi|332180530|gb|AEE16218.1| glycyl-tRNA synthetase [Treponema brennaborense DSM 12168]
          Length = 448

 Score = 80.6 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 48/335 (14%), Positives = 103/335 (30%), Gaps = 27/335 (8%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR-ELPVRLAEFGSVYRNEPS 374
            N+                 L+P    G    + + ++S R ++P  +A+ G  +RNE  
Sbjct: 128 FNLMFKTHIGPAEDSASVVYLRPETAQGIYVNYKNIIQSNRMKVPFGIAQVGKAFRNEIV 187

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
            + + + R   F Q +   F     +  + E  +              EK+      +  
Sbjct: 188 -TKNFIFRTCEFEQMEMQFFVKPGEDDKWFEYWREQRWSFYKKYGIHMEKLRWYHHEKLA 246

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAI-GRDW 491
                    +    +    L+ + N +   +                +    D   G + 
Sbjct: 247 HYAKDAYDIEYEFPMGFQELEGVHNRTNFDLTRHTEFSGK-------DMQYIDQDNGNEK 299

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLS 551
               I       +R    ++    E+ +      A  G+ E +  ++  +F       ++
Sbjct: 300 YIPYIIETSAGLTRNLLMFLCDAYEEQN-----VAAAGAPEDYRTVL--HFHPK----IA 348

Query: 552 PIQAIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIIC 609
           P+   +  +       E AQEI   L+     +    ++ TI  + R       P  I  
Sbjct: 349 PVTVAILPLMKKDGLAELAQEIRAELQEE--FVTDYDQSGTIGKRYRRQDEIGTPFCITV 406

Query: 610 GDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
                 + ++ IR   S    +V   + +  L +E
Sbjct: 407 DHDTKEDGTVTIRFRDSMEQIRVPRSELVSRLHQE 441


>gi|268608254|ref|ZP_06141981.1| glycyl-tRNA synthetase [Ruminococcus flavefaciens FD-1]
          Length = 468

 Score = 80.6 bits (197), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 51/346 (14%), Positives = 110/346 (31%), Gaps = 51/346 (14%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    F +  ++  +++P  +A+ G  +RNE +
Sbjct: 148 FNLMFKTFQGVTEDSKSELYLRPETAQGIFVNFANIQRTTRKKVPFGVAQVGKSFRNEIT 207

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
              + + RVR F Q +   FC    +  + +  + +     +      E I ++   + E
Sbjct: 208 PG-NFIFRVREFEQMELEFFCKPGTDLEWFDYWRSYCKNFLLSLGLKEENIRLRDHDKEE 266

Query: 433 KRVGSD--------------ALWDDAENIMKGVLDTIKNSSQ--DRINTGVLLGEGAFYG 476
               S                LW  A+     +   I  S +  +  +          Y 
Sbjct: 267 LCFYSKATTDFEYLFPFGWGELWGVADRTDYDLTQHINTSGKSLEYFDPETNEK----YI 322

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
           P   Y+++ ++G +    ++  +        +   N + +K    ++H            
Sbjct: 323 P---YVIEPSLGVERLFLSVVTEAYDEEELVSTDKNGNEKKEIRTVMH------------ 367

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                        L+P +  V  +       A+E+  +L      ++ D    TI  + R
Sbjct: 368 ---------FHPALAPFKCAVLPLVKKLTPKAEEVYEMLSKK-FMVDFDEAG-TIGKRYR 416

Query: 597 EHSIKKIPIIIICGDKEAS-ERSIGIRRFGSTTTQKVSLLDAIPIL 641
                  P  I         +  + +R   +    +VSL +    +
Sbjct: 417 RQDEIGTPFCITVDFDTIEKDNCVTVRDRDTMEQVRVSLDELEEFI 462


>gi|256372043|ref|YP_003109867.1| glycyl-tRNA synthetase [Acidimicrobium ferrooxidans DSM 10331]
 gi|256008627|gb|ACU54194.1| glycyl-tRNA synthetase [Acidimicrobium ferrooxidans DSM 10331]
          Length = 448

 Score = 80.6 bits (197), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 54/422 (12%), Positives = 118/422 (27%), Gaps = 77/422 (18%)

Query: 270 RKGWKIFQTLISYMRRKIKDDYEEIN---TPQVLDQHLWQQSGHWDSYRANMFAVKCADD 326
             G  + + +       +  +  E+       +    +W+ SGH + +   +   +   +
Sbjct: 38  PLGVLLLRKIREAWWSYMVRERREVVGLEASILTPPAIWRASGHLEHFTDPLVDCRSCHE 97

Query: 327 TIK-----------------------------------DLRTFALKPMNCPGHVAVFNHG 351
             +                                   +     L+P    G        
Sbjct: 98  RWRADQIDGVCPKCGSRDLTPARAFNLMFRTFVGPVEGEGAEAYLRPETAQGMFVDAQSV 157

Query: 352 LKSYR-ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
            ++ R   P  +A+ G  +RNE +   + + R R F Q +   F                
Sbjct: 158 ARAMRLRPPFGIAQIGKSFRNEITPG-NFVFRTREFEQMEMEYFVHPSVAAEAHDFWIAE 216

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
            +  Y++ G E   ++L          D L   +   +           + R   G    
Sbjct: 217 RLRWYQELGLEGDWLRLREHDA-----DELSHYSSRTV---------DIEFRFPWGYGEL 262

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI------H 524
           EG      F+     A   +       +D     R+    +          M       H
Sbjct: 263 EGIANRTDFDLRAHAAASGEDLSV---LDPVTEERYYPSTIEPAGGVTRAAMAFLLAAYH 319

Query: 525 RAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA--VEYAQEIANLLKSHHLSI 582
                   R +  +  +        L+P    V  ++     VE A EI   L +    +
Sbjct: 320 VDEVNGESRTVLRLSPH--------LAPYTVAVLPLSRKPALVELAHEIFADLATI---V 368

Query: 583 ETDFRN-ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           + D+   ++I  + R       P  +        +R++ +R   +    ++ + D +  +
Sbjct: 369 DVDYDETQSIGRRYRRQDEIGTPWCVTVDFDSLEDRAVTVRDRDTLEQVRIPVADLVAHV 428

Query: 642 TK 643
            +
Sbjct: 429 RE 430


>gi|289449623|ref|YP_003475535.1| serine--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5]
 gi|289184170|gb|ADC90595.1| serine--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5]
          Length = 432

 Score = 80.6 bits (197), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 38/247 (15%), Positives = 89/247 (36%), Gaps = 17/247 (6%)

Query: 213 NRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKG 272
               + +++G           ++   E  +  D+ + ++           +G   +   G
Sbjct: 117 ENNRVVKVFGNKPEFNFPAKHHVELAESLDIIDYARGSKLSG--------NGFWIYKNMG 168

Query: 273 WKIFQTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
            ++   L++Y M+  +KD+YE +  P +L+      +G +  ++ ++F +   + T +  
Sbjct: 169 ARLEWALLNYFMQEHLKDNYEMLLVPHILNYTCGFTAGQFPKFKEDVFWLVSEEGTEEAN 228

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQ 388
           R F L P      V ++   +    +LP +   +   YR E         G++R   F +
Sbjct: 229 RQFIL-PTAETALVNLYRDEILDESDLPKKFFAYTPCYRKEAGSYRAEERGMIRGHQFNK 287

Query: 389 DDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK----LSTRPEKRVGSDALWDDA 444
            +   +   E       ++ +    +    G    + K      +    R     +W  +
Sbjct: 288 IEMFQYTLPENSAQAFDELVDKACRLVAGLGLHFRLSKLAAGDCSASMARTDDIEIWIPS 347

Query: 445 ENIMKGV 451
            N  K V
Sbjct: 348 MNDYKEV 354


>gi|315924009|ref|ZP_07920236.1| glycyl-tRNA synthetase beta subunit [Pseudoramibacter alactolyticus
           ATCC 23263]
 gi|315622635|gb|EFV02589.1| glycyl-tRNA synthetase beta subunit [Pseudoramibacter alactolyticus
           ATCC 23263]
          Length = 461

 Score = 80.2 bits (196), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 50/352 (14%), Positives = 114/352 (32%), Gaps = 50/352 (14%)

Query: 307 QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEF 365
           +S   +  + N+        T        L+P    G    F +  ++  + +P  + + 
Sbjct: 141 ESDFTEIRQFNLMFKTFQGVTEDSTSQLYLRPETAQGIFVNFKNAQRTTRKRVPFGIGQI 200

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKI 423
           G  +RNE +   + + R R F Q +   FC    +  +    K +            E +
Sbjct: 201 GKSFRNEITPG-NFIFRTREFEQMELEFFCKPGTDLEWFTYWKDYCRSWLFSLGMKEENL 259

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
             +  +  E    S+A  D                    +      G G  +G       
Sbjct: 260 RFRDHSPEELSHYSNATTD--------------------VEYQFPFGWGELWGIA----- 294

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM---IE 540
                 D     +    N+  +   +   + +EK  P +I     G+   F+  +   +E
Sbjct: 295 ------DRTDFDLTQHENVSGKDLRYQDPATNEKYIPYVIE-PSLGADRMFLAFLCDALE 347

Query: 541 NFKGNLP---------LWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           + K +            +LS  +A V  ++    + A+E+   L + + +++ D    +I
Sbjct: 348 HEKLDGGDTRNVMKIHPFLSAYKAAVLPLSKKLSDKAREVYADL-AKYFNVDYDETG-SI 405

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             + R       P+ +        + ++ IR   +    ++ +      + +
Sbjct: 406 GKRYRREDEIGTPLCVTIDFDTLEDNAVTIRDRDTMEQIRLPIGQVKAYIEE 457


>gi|162447800|ref|YP_001620932.1| glycyl-tRNA synthetase, class II [Acholeplasma laidlawii PG-8A]
 gi|161985907|gb|ABX81556.1| glycyl-tRNA synthetase, class II [Acholeplasma laidlawii PG-8A]
          Length = 456

 Score = 80.2 bits (196), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 58/367 (15%), Positives = 118/367 (32%), Gaps = 41/367 (11%)

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH 350
           Y+ I     +   + + S      + NM          +      L+P    G    F +
Sbjct: 120 YQYI-MDHKIKDPVSKTSDWLPIRKFNMMFKTFQGVVEETANEVYLRPETAQGIFINFKN 178

Query: 351 GLKSYR-ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
             ++ R ++P  +A+ G  +RNE +   +   R R F Q +   FC             +
Sbjct: 179 IQRAQRLKVPFGVAQIGKSFRNEITPG-NFTFRTREFEQMELEFFCKPGTEIQWFDYWLD 237

Query: 410 LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL 469
            ++      G ++  ++                 AE   K  L    N++ D I      
Sbjct: 238 RMLKFLTSLGVKEESLR-----------------AEPHAKEALSHYSNATTD-IEFKYPW 279

Query: 470 GEGAFYG----PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
           G    +G      F+      + ++       +D     R+  + V         +++  
Sbjct: 280 GFDELWGIASRTNFDLKSHQDLSKED---MSYLDPETNERYIPYVVEPSVGVERLLLVFL 336

Query: 526 AVFGSIERFIGIMIENFK----GNLPLWLSPIQAIVTT-ITSSAVEYAQEIANLLKSHHL 580
                 E      +EN        L   L+P +A +   +     + A+EI  +L  + L
Sbjct: 337 LNGLEEET-----LENGDVRQVLKLHPKLAPYKAAILPLVRKEHSQKAREIHEMLSEN-L 390

Query: 581 SIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
            +  D     I  + R       P  I    +   + ++ IR   S    ++++ D I  
Sbjct: 391 DVVYDETQN-IGKRYRRQDAIGTPFCITVDHQTMDDDTVTIRHRDSMEQSRIAIKD-IEQ 448

Query: 641 LTKESLP 647
             +++  
Sbjct: 449 FIQQATK 455


>gi|70726352|ref|YP_253266.1| glycyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
 gi|123762313|sp|Q4L6R5|SYG_STAHJ RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|68447076|dbj|BAE04660.1| glycyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
          Length = 463

 Score = 80.2 bits (196), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 49/343 (14%), Positives = 107/343 (31%), Gaps = 49/343 (14%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    + +  +S  ++LP  + + G  +RNE +
Sbjct: 151 FNLMFKTFQGVTEDSTNEIFLRPETAQGIFVNYKNVQRSMRKKLPFGIGQIGKSFRNEIT 210

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
              + + R R F Q +   FC   E++  +           +K F  + +          
Sbjct: 211 PG-NFIFRTREFEQMELEFFCKPGEEIEWQNY---------WKTFASQWLKDLNINEENM 260

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
           R+      + +           +         G+          + ++ LK         
Sbjct: 261 RLRDHDEEELSHYSNATTDIEYRFPFGWGELWGIAS--------RTDFDLK--------- 303

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK---------- 543
              +   +    F  ++    +EK  P  I     G+    +  + + ++          
Sbjct: 304 ---KHSEHSGEDFK-YHDPETNEKYVPYCIE-PSLGADRVTLAFLCDAYEEEGVEGSKDA 358

Query: 544 ---GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
               +    L+P +A V  ++    E A +I   L S   +I+ D   ++I  + R    
Sbjct: 359 RTVMHFHPALAPYKAAVLPLSKKLSEEAIKIFEQLSSK-FAIDFDES-QSIGKRYRRQDE 416

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              P  I        +  + +R   S    ++ + +    L +
Sbjct: 417 IGTPYCITFDFDSLEDNQVTVRDRDSMEQVRMPISELETFLAE 459


>gi|311114395|ref|YP_003985616.1| glycine--tRNA ligase [Gardnerella vaginalis ATCC 14019]
 gi|310945889|gb|ADP38593.1| glycine--tRNA ligase [Gardnerella vaginalis ATCC 14019]
          Length = 506

 Score = 80.2 bits (196), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 57/379 (15%), Positives = 115/379 (30%), Gaps = 48/379 (12%)

Query: 278 TLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALK 337
            L      K  D   E     +       +    +    NM           +     L+
Sbjct: 102 KLEESYAEKHGDKMPENGLKDIACPDCGTRGNWTEPRDFNMMLRTHLGPVEDENSLHYLR 161

Query: 338 PMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT 396
           P    G    F +    + ++ P  +A  G  +RNE +   + + R R F Q +   F  
Sbjct: 162 PETAQGIFVDFKNVMTATRQKPPFGIANIGKSFRNEITPG-NFIFRTREFEQMEMEFFVE 220

Query: 397 KEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIK 456
                       +  ++ Y D G +   +++   P+         +   +  K  +D   
Sbjct: 221 PGTDEAWHQYWIDTRVNWYVDLGVKPENLRMYEHPK---------EKLSHYSKRTVDIEY 271

Query: 457 NSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE 516
                  + G L G            + +    D          +L      ++  +  E
Sbjct: 272 KFGFQGSDWGELEG------------IANRTDYDLSAHAKHSGEDLS-----YFNQATGE 314

Query: 517 KCHPVMIHRAVFGSIERFIGIMIENFK----------------GNLPLWLSPIQAIVTTI 560
           K  P +I     G     +  +++ +                   L   L+P++A V  +
Sbjct: 315 KYVPYVIE-PAAGLTRSLMAFLVDAYDVDEAPNTKGGVDKRTVLRLDPRLAPVKAAVLPL 373

Query: 561 TSSAV--EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERS 618
           +        AQ++A+ L+ H   I+ D     I  + R       P+ +        + +
Sbjct: 374 SKKPELQAVAQDLASDLRQHDWVIDYDESGA-IGRRYRREDEIGTPLCVTVDFDTLEDHA 432

Query: 619 IGIRRFGSTTTQKVSLLDA 637
           + IR   +   ++VSL   
Sbjct: 433 VTIRERDTMQQERVSLDKV 451


>gi|298253424|ref|ZP_06977216.1| glycyl-tRNA synthetase [Gardnerella vaginalis 5-1]
 gi|297532819|gb|EFH71705.1| glycyl-tRNA synthetase [Gardnerella vaginalis 5-1]
          Length = 506

 Score = 80.2 bits (196), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 59/379 (15%), Positives = 114/379 (30%), Gaps = 48/379 (12%)

Query: 278 TLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALK 337
            L      K  D   E     +       +    +    NM           +     L+
Sbjct: 102 KLEESYAEKHGDKMPENGLKDIACPDCGTRGNWTEPRDFNMMLRTHLGPVEDENSLHYLR 161

Query: 338 PMNCPGHVAVFNHGLKSYRELP-VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT 396
           P    G    F + + S R+ P   +A  G  +RNE +   + + R R F Q +   F  
Sbjct: 162 PETAQGIFVDFKNVMTSARQKPPFGIANIGKSFRNEITPG-NFIFRTREFEQMEMEFFVE 220

Query: 397 KEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIK 456
                       +  +  Y D G +   +++   P+         +   +  K  +D   
Sbjct: 221 PGTDEAWHQYWIDTRVRWYVDLGVKPENLRMYEHPK---------EKLSHYSKRTVDIEY 271

Query: 457 NSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE 516
                  + G L G            + +    D          +L      ++  +  E
Sbjct: 272 KFGFQGSDWGELEG------------IANRTDYDLSAHAKHSGEDLS-----YFNQATGE 314

Query: 517 KCHPVMIHRAVFGSIERFIGIMIENFK----------------GNLPLWLSPIQAIVTTI 560
           K  P +I     G     +  +++ +                   L   L+P++A V  +
Sbjct: 315 KYVPYVIE-PAAGLTRSLMAFLVDAYDVDEAPNTKGGVDKRTVLRLDPRLAPVKAAVLPL 373

Query: 561 TSSAV--EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERS 618
           +        AQ++A  L+ H   I+ D     I  + R       P+ +        + +
Sbjct: 374 SKKPELQAVAQDLAADLRQHDWVIDYDEAGA-IGRRYRREDEIGTPLCVTVDFDTLEDHA 432

Query: 619 IGIRRFGSTTTQKVSLLDA 637
           + IR   +   ++VSL   
Sbjct: 433 VTIRERDTMQQERVSLDKV 451


>gi|167947531|ref|ZP_02534605.1| prolyl-tRNA synthetase [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 110

 Score = 80.2 bits (196), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 47/116 (40%), Gaps = 9/116 (7%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            ++  L        ++E   H+ + R   +  +A    G+  W   G ++ + + + +R 
Sbjct: 3   TSEFPLQTVKETPADAETASHKLMLRAGMIRKLAA---GLYTWLPLGLRVLRKVEAIVRE 59

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
           ++      E+  P V    LWQ+SG W+ Y   +  +K      +  R F   P +
Sbjct: 60  EMDRAGALELLMPAVQPAELWQESGRWEQYGPELLRLKD-----RHQREFCFGPNH 110


>gi|50954005|ref|YP_061293.1| glycyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07]
 gi|71657968|sp|Q6AHF7|SYG_LEIXX RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|50950487|gb|AAT88188.1| glycyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07]
          Length = 463

 Score = 80.2 bits (196), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 54/357 (15%), Positives = 119/357 (33%), Gaps = 34/357 (9%)

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF-ALKPMNCPGHVAVFNHGLK-SYR 356
           + D    ++ G W   R     +K     + D      ++P    G    F   L+ S +
Sbjct: 124 IADPDHPEKVGQWTPIRPFSGLMKTYLGIVDDESGLHYMRPETAQGIFTDFASVLQTSRK 183

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           + P  + + G  +RNE +   + + R R F Q +   F              +L    + 
Sbjct: 184 KPPFGIGQIGKAFRNEITPG-NFIFRTREFEQMEIEFFVEPGTDEEWFDTWIDLSWEWFT 242

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
             G +   ++   R E    S A +      ++   +   +   + +     +   A + 
Sbjct: 243 GLGIKPENIR---RFEHPKDSLAHYSKRTIDIEYKFEFAGSEWGELMG----VANRADFD 295

Query: 477 PKF-------EYILKDAIGRDWQCG-TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
            K        +    D    +      I+  F L     AF V+++ E+  P        
Sbjct: 296 LKTHIEHSGKDLSYFDQNKNERYVPFVIEPSFGLTRALMAFLVDAYDEEQAPNAKG---- 351

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT--SSAVEYAQEIANLLKSHHLSIETDF 586
           G+ +R +  +           L+P++  V  ++   +    A+ +A+ L+     ++ D 
Sbjct: 352 GTDKRTVLHL--------DPRLAPVKVAVLPLSRNEALSPLARGLADRLRQRRA-VDFDD 402

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
               I  + R       P+ +        + ++ +R   S   +++ L      L +
Sbjct: 403 SGA-IGRRYRREDEIGTPLAVTVDFDSLEDDAVTVRDRDSMRQERIPLEGLDRYLAE 458


>gi|290769989|gb|ADD61756.1| putative protein [uncultured organism]
          Length = 462

 Score = 80.2 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 46/335 (13%), Positives = 101/335 (30%), Gaps = 46/335 (13%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPS 374
            N+        T     T  L+P    G    F +  + S +++P  + + G  +RNE +
Sbjct: 151 FNLMFKTFQGVTEDAKNTVYLRPETAQGIFVNFKNVQRTSRKKVPFGIGQIGKSFRNEIT 210

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              +   R R F Q +   FC                I   K  G ++  ++      + 
Sbjct: 211 PG-NFTFRTREFEQMELEFFCKPGTDLEWFTYWRQYCIDWLKALGMKEDEMRARDHSPEE 269

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           +                     +     I      G G  +G   +    D         
Sbjct: 270 L------------------CFYSKGTTDIEFLFPFGWGELWGIA-DRTDYDLT------- 303

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI-----ENFKG----- 544
             Q         +  Y +  +++ +   +     G+    +  +      E  +G     
Sbjct: 304 --QHQTVSGE--DMSYFDDEAKEKYIPYVIEPSLGADRVTLAFLCSAYDEEELEGGDVRT 359

Query: 545 --NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
             +    L+P++  +  ++    E A+++   L  +  + E D R   I  + R      
Sbjct: 360 VLHFHPALAPVKIGILPLSKKLNEGAEKVYAELSKY-YNCEFDDRGN-IGKRYRRQDEIG 417

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
            P  I        + ++ +R   +   +++ + D 
Sbjct: 418 TPFCITYDFDSEEDGAVTVRDRDTMQQERIKIADL 452


>gi|68076271|ref|XP_680055.1| prolyl-t-RNA synthase [Plasmodium berghei strain ANKA]
 gi|56500925|emb|CAH98273.1| prolyl-t-RNA synthase, putative [Plasmodium berghei]
          Length = 523

 Score = 80.2 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 53/371 (14%), Positives = 117/371 (31%), Gaps = 72/371 (19%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-D 290
             +   ++++  +    L R   +  I    +G+      G ++   +  ++   ++  +
Sbjct: 64  KIFNDNIKQNGDKASELLFRANYIKEI----NGLYNMLPLGLRVINKIKDFINNYLEKIN 119

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD------------LRTFALKP 338
              +    +  + LW  S  +  Y      V        D                 L P
Sbjct: 120 SHSVFLSILQPKRLWNISDRYKLYSDEFLYVYKQKQQKADTNLGETIKKKFEEDGNILSP 179

Query: 339 MNCPGHVAVFNHGLK---SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC 395
                 + + N       + +  P+ + ++   +RNE       L + + F   D + F 
Sbjct: 180 TCEETALTLINEVYNLNATEKHFPLLIHQYNYKFRNEKRLE-KSLFKSKEFLMKDGYSFH 238

Query: 396 TKEQMFNECLKIHNLII-SIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDT 454
           T E+  NE  +I+      I+   G +  ++K   + +                   L++
Sbjct: 239 TNEKCMNEIYEIYKECYNDIFNKLGLKYNIIKKRKKDKM----------------NALES 282

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNS 513
                                    EY +    G+  +   I  +      + N  ++N 
Sbjct: 283 H------------------------EYQILCRDGKFKEGAHIFKLGDYYSKKLNINFLNK 318

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIMIENF----KGNLPLWLSPIQAIVTTITSS---AVE 566
            +EK +  M    +   I R +  +I+NF       LP  ++P    +         + E
Sbjct: 319 KNEKKNIYMGSYGI--GINRLLYFLIDNFYDENGIKLPSQVAPFSIYLIQTNQKSKYSSE 376

Query: 567 YAQEIANLLKS 577
              +IAN L++
Sbjct: 377 KVNKIANTLRN 387


>gi|327440917|dbj|BAK17282.1| glycyl-tRNA synthetase [Solibacillus silvestris StLB046]
          Length = 462

 Score = 80.2 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 46/337 (13%), Positives = 102/337 (30%), Gaps = 38/337 (11%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    F +  +S  ++ P  +A+ G  +RNE +
Sbjct: 151 FNLMFKTHQGVTESSSNEIYLRPETAQGIFVNFKNVQRSMRKKTPFGIAQIGKSFRNEIT 210

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
              +   R R F Q +   FC   E +            +     G ++  ++L    + 
Sbjct: 211 PG-NFTFRTREFEQMELEFFCKPGEDLEWHSY-WKEFCKNWLLALGMKEDSMRLRDHEDD 268

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK-------FEYILKDA 486
            +   + + +A   +       +         G+   +   Y  K        ++   D 
Sbjct: 269 EL---SHYSNATTDI-----EFRFPFGWGELWGI--ADRTDYDLKQHMEHSGEDFTYIDP 318

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNL 546
           +  +              R    ++    E+         + G   R +           
Sbjct: 319 VSNERYVPYCIEPSLGADRVTLAFLCDAYEEE-------QLEGDDTRTV--------LRF 363

Query: 547 PLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPII 606
              L+P +A V  ++    E A ++   L+     ++ D   ++I  + R       P  
Sbjct: 364 HPALAPFKAAVLPLSKKLSEEAGDVWADLRKAFP-VDYDES-QSIGKRYRRQDEIGTPFC 421

Query: 607 IICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           I        +  + +R   S    ++ + +    + K
Sbjct: 422 ITYDFDSKEDGQVTVRHRDSMEQIRMPIAEVKAYIEK 458


>gi|311113190|ref|YP_003984412.1| glycyl-tRNA synthetase subunit beta [Rothia dentocariosa ATCC
           17931]
 gi|310944684|gb|ADP40978.1| glycyl-tRNA synthetase beta subunit [Rothia dentocariosa ATCC
           17931]
          Length = 459

 Score = 80.2 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 63/380 (16%), Positives = 127/380 (33%), Gaps = 42/380 (11%)

Query: 277 QTLISYMRRK--IKDDYEEINTPQVLDQHLWQQ----SGHWDSYRANMFAVKCADDTIKD 330
             + ++  +K    ++  E+  P    +  W +    SG   +Y               +
Sbjct: 103 HLIEAFEAKKGRAPENMGEVVCPNCGTRGEWTEPQNFSGLLKTY---------LGPVDNE 153

Query: 331 LRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
                L+P    G    FN+ + +  +  P  + + G  +RNE +   + + R R F Q 
Sbjct: 154 EGLHFLRPETAQGIFVNFNNVVTAARKRPPFGIGQIGKAFRNEITPG-NFIFRTREFEQM 212

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKL-----STRPEKRVGSDALWDDA 444
           +   F   ++             + + D G     ++        R     G+  +    
Sbjct: 213 EIEYFVHPDEADKHFNAWVEDCWNWFVDLGINPENMRRFDVPEDDRAHYSAGTIDIEYRF 272

Query: 445 ENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPS 504
                   + +  +++   + GV          K EY  + A G  +    I+  F L  
Sbjct: 273 GFQGGEWGELMGVANRTDYDLGVHNEHS---NAKLEYFDQ-ASGERYVPYVIEPSFGLTR 328

Query: 505 RFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA 564
              AF V+++ E   P        G  +R +          L   L+P++A V  ++   
Sbjct: 329 SMMAFLVDAYVEDEAPNTKG----GVDKRVV--------LKLDPRLAPVKAAVLPLSKKP 376

Query: 565 V--EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
              E A ++A  L     +I+ D     I  + R       P  I        ++++ IR
Sbjct: 377 ELSEPAHKLAADLCGA-WNIDYDEAGA-IGRRYRRQDEIGTPFCITVDFDTLEDQAVTIR 434

Query: 623 RFGSTTTQKVSLLDAIPILT 642
              + + ++V+L      L 
Sbjct: 435 ERDTMSQERVALDQVKAYLA 454


>gi|269114991|ref|YP_003302754.1| glycyl-tRNA synthetase [Mycoplasma hominis]
 gi|268322616|emb|CAX37351.1| Glycyl-tRNA synthetase [Mycoplasma hominis ATCC 23114]
          Length = 458

 Score = 80.2 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 54/335 (16%), Positives = 103/335 (30%), Gaps = 33/335 (9%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR-ELPVRLAEFGSVYRNEPS 374
            N+                 L+P    G    F + L++ R +LP  + + G  +RNE +
Sbjct: 147 FNLMFKTQMGAIDTAANQTYLRPETAQGIFINFKNVLRTTRAKLPFGIGQIGKSFRNEIT 206

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
                + R R F Q +   FC                +      G +   +++    ++ 
Sbjct: 207 PR-DFIFRTREFEQMELEYFCNPSDDEKFYHYWIKKCVDFVTLLGLKSENIRIRPHEKEE 265

Query: 435 V-----GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGR 489
           +     G+  +          +L      + D      L     +     EY+L D  G 
Sbjct: 266 LSHYSKGTSDIEYLFPFGWGELLGIANRGNYD------LSQHMKYSNESLEYLLDD--GT 317

Query: 490 DWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW 549
                 I+    L     A  V+S+ E        + +  +  R +          L   
Sbjct: 318 KIIPHVIEPSIGLDRLLLALLVDSYEE--------QELENNDVRIV--------LKLDFN 361

Query: 550 LSPIQAIVTTITSSAVEYAQEIAN-LLKSHHLSIETDFRNETINYKIREHSIKKIPIIII 608
           ++P Q  +  +       A+EI + LL+   L +  D    +I  + R       P  + 
Sbjct: 362 IAPYQVAIFPLMKKLNSKAKEIFDNLLQKTELRLIYDESG-SIGKRYRRQDAIGTPFAVT 420

Query: 609 CGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
                  + ++ +R   S     V L + I     
Sbjct: 421 IDFDTLEKNTVTVRERDSMKQHVVELDNLIKFFEN 455


>gi|325678778|ref|ZP_08158376.1| glycine--tRNA ligase [Ruminococcus albus 8]
 gi|324109282|gb|EGC03500.1| glycine--tRNA ligase [Ruminococcus albus 8]
          Length = 461

 Score = 80.2 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 51/344 (14%), Positives = 113/344 (32%), Gaps = 49/344 (14%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    F +  ++  +++P  +A+ G  +RNE +
Sbjct: 147 FNLMFKTFQGITEDTKSERYLRPETAQGIFVNFANIQRTTRKKVPFGVAQVGKSFRNEIT 206

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              + + RVR F Q +   FC                          +      T  +  
Sbjct: 207 PG-NFIFRVREFEQMELEFFCKPGTDL--------------------EWFDYWRTFCKNF 245

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           + S  + ++   +     + +   S+   +   L   G  +G  +    +          
Sbjct: 246 LLSLNIKEENLRLRDHSAEELCFYSKATTDFEYLFPFG--WGELWGVADRTDYD------ 297

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK----------- 543
            +    N   +   +     +EK  P +I     G    F+ ++ E +            
Sbjct: 298 -LTQHINTSGKRLDYLDPETNEKYIPYVIE-PSLGVERLFLTVVTEAYDEEDIGTPEKPD 355

Query: 544 ----GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
                +    L+P +A V  ++    E AQ++ + L + H S++ D    +I  + R   
Sbjct: 356 VRTVMHFHPALAPFKACVLPLSKKLAEPAQKLFDTL-AKHFSVDYDEAG-SIGKRYRRQD 413

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
               PI +        +  + +R   +   +++ + D +  + K
Sbjct: 414 EIGTPICVTYDFDSVEDGCVTVRDRDTMEQERIKIEDLVGYIAK 457


>gi|311895944|dbj|BAJ28352.1| putative glycyl-tRNA synthetase [Kitasatospora setae KM-6054]
          Length = 460

 Score = 80.2 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 51/327 (15%), Positives = 100/327 (30%), Gaps = 49/327 (14%)

Query: 335 ALKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
            L+P    G    F      S ++ P  +A+ G  +RNE +   + + R R F Q +   
Sbjct: 158 YLRPETAQGIFTNFRAVQTTSRKKPPFGIAQVGKSFRNEITPG-NFIFRTREFEQMEMEF 216

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
           F    +             + Y D G     ++    P                 K  L 
Sbjct: 217 FVKPGEDETWHEYWLEQRWNWYVDLGLRTENMRFFEHP-----------------KEKLS 259

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS 513
                + D I      G   F        L+    R     T+  +    S  +  Y + 
Sbjct: 260 HYAKRTVD-IEYRFNFGGSEF------SELEGVANRTDYDLTVHSEH---SGQDLKYFDQ 309

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIMIENF----------------KGNLPLWLSPIQAIV 557
            + + +   +     G     +  +++ +                   L   L+P++  V
Sbjct: 310 DANERYFPYVIEPAAGLNRAMLAFLLDAYFEDEAPNAKGVMEKRVGMRLDPRLAPVKVAV 369

Query: 558 TTITSSAV--EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEAS 615
             ++ +A     A+ +A  L+S   ++E D     I  + R       P  +        
Sbjct: 370 LPLSRNADLSPKARGLAADLRSA-WNVEFDDAGA-IGKRYRRQDEIGTPFCVTVDFDTLE 427

Query: 616 ERSIGIRRFGSTTTQKVSLLDAIPILT 642
           + ++ +R   +   ++VSL      L 
Sbjct: 428 DNAVTVRDRDTMAQERVSLDQVKSYLA 454


>gi|314928065|gb|EFS91896.1| glycyl-tRNA synthetase [Propionibacterium acnes HL044PA1]
          Length = 504

 Score = 80.2 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 58/362 (16%), Positives = 121/362 (33%), Gaps = 29/362 (8%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           EEIN P   ++  W +         NM           +     L+P    G    F + 
Sbjct: 164 EEINCPNCGNKGQWTEPR-----DFNMMLKTYLGPVEDEAGLHYLRPETAQGIFVNFQNV 218

Query: 352 LKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
           L S  ++ P  +A+ G  +RNE +   + + R R F Q +   F              + 
Sbjct: 219 LTSARKKPPFGIAQTGKSFRNEITPG-NFIFRTREFEQMEMEFFVEPGTDEEWHQYWIDE 277

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
             + Y D G     ++    P+         +   +  K  +D          + G L G
Sbjct: 278 RTNWYTDLGINADNLRHYEHPK---------EKLSHYSKRTVDIEYKFGFAGSDWGELEG 328

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
                  + ++ L        +  +   D     R+  + +   +     +M       +
Sbjct: 329 IAN----RTDFDLGTHTKHSGKDLS-YFDQAQNKRYLPYVIEPAAGLTRSLMAFMVDAYT 383

Query: 531 IERFI---GIMIENFKGNLPLWLSPIQAIVTTIT--SSAVEYAQEIANLLKSHHLSIETD 585
            +      G + +     L   L+P++A V  ++  S     A+++A  L+    +++ D
Sbjct: 384 EDEAPNAKGGVDKRTVLKLDPRLAPVKAAVLPLSRNSDLSPKARDLAAQLR-QWWNVDFD 442

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
              + I  + R       P  +        + ++ +R   + + ++++L      L  E 
Sbjct: 443 D-AQAIGKRYRRQDEIGTPFCVTVDFDTLDDNAVTVRDRDTMSQERIALDKVEDYLA-ER 500

Query: 646 LP 647
           LP
Sbjct: 501 LP 502


>gi|256070951|ref|XP_002571805.1| threonyl-tRNA synthetase-related [Schistosoma mansoni]
 gi|238656953|emb|CAZ28035.1| threonyl-tRNA synthetase-related [Schistosoma mansoni]
          Length = 144

 Score = 80.2 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 5/82 (6%)

Query: 3   SDIKLTFPDGSIKNF-PVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIE 60
           S +++T PDG+I +      T  +VA++IS++LA+ AV   +NG++ DL  P     S+E
Sbjct: 49  SPVQITLPDGTIVDGKAWETTPMEVAKNISKTLAEHAVIAKVNGELWDLLRPFEKNSSLE 108

Query: 61  IITPEDPR---SLAVIRHSCAH 79
           I   +      SL VI  S   
Sbjct: 109 IYNFDHKDVTGSLGVILASLFF 130


>gi|169628792|ref|YP_001702441.1| glycyl-tRNA synthetase [Mycobacterium abscessus ATCC 19977]
 gi|169240759|emb|CAM61787.1| Glycyl-TRNA synthetase (GlyS) [Mycobacterium abscessus]
          Length = 472

 Score = 80.2 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 56/372 (15%), Positives = 114/372 (30%), Gaps = 54/372 (14%)

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH 350
             EI  P   ++  W +         NM           +     L+P    G    F +
Sbjct: 131 MTEIVCPDCGNKGQWTEPR-----DFNMMLKTYLGPIETEEGLHYLRPETAQGIFINFKN 185

Query: 351 GLK-SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
            +  S ++ P  + + G  +RNE +   + + R R F Q +   F              +
Sbjct: 186 VVTTSRQKPPFGIGQIGKSFRNEITPG-NFIFRTREFEQMEMEFFVEPSTAPEWHKYWID 244

Query: 410 LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL 469
             +  Y D G +   ++L   P+         +   +   G +D            G L 
Sbjct: 245 TRLQWYVDLGIDPENLRLYDHPK---------EKLSHYSDGTVDIEYKFGFSGNPWGELE 295

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG 529
           G            + +    D          +L      +Y  +   +  P +I     G
Sbjct: 296 G------------IANRTDFDLSTHAKHSGEDLS-----YYDQAEDRRYTPYVIE-PAAG 337

Query: 530 SIERFIGIMIENFKGN----------------LPLWLSPIQAIVTTITSSAV--EYAQEI 571
               F+  +++ +  +                L   L+P++  V  ++ +A     A+ +
Sbjct: 338 LTRSFMAFLVDAYHEDEAPNAKGGVDTRTVLRLDPRLAPVKVAVLPLSRNADLSPRAKAL 397

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
           A  L+    +++ D     I  + R       P  +        + S+ +R     T Q+
Sbjct: 398 AAELRQS-WNVDFDDAGA-IGRRYRRQDEIGTPFCVTVDFDSLEDDSVTVRDRDEMTQQR 455

Query: 632 VSLLDAIPILTK 643
           + +      L K
Sbjct: 456 IPIGGVADHLAK 467


>gi|154488946|ref|ZP_02029795.1| hypothetical protein BIFADO_02255 [Bifidobacterium adolescentis
           L2-32]
 gi|154083083|gb|EDN82128.1| hypothetical protein BIFADO_02255 [Bifidobacterium adolescentis
           L2-32]
          Length = 491

 Score = 80.2 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 57/385 (14%), Positives = 117/385 (30%), Gaps = 48/385 (12%)

Query: 278 TLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALK 337
            L      K  D   E     ++      +    +    NM           +     L+
Sbjct: 102 KLEESYAEKHGDKLPENGMADIVCPDCGTRGKWTEPRDFNMMLRTHLGPVEDENSLHYLR 161

Query: 338 PMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT 396
           P    G    F +    S ++ P  +A  G  +RNE +   + + R R F Q +   F  
Sbjct: 162 PETAQGIFVDFKNVMTSSRKKPPFGIANMGKSFRNEITPG-NFIFRTREFEQMEMEFFVK 220

Query: 397 KEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIK 456
             +         +     Y D G +   ++    P+         +   +  K  +D   
Sbjct: 221 PGEDEAWHQYWIDARTQWYLDLGVKPENLRHYEHPK---------EKLAHYSKRTVDIEY 271

Query: 457 NSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE 516
                  + G L G            + +    D          +L      ++  +  E
Sbjct: 272 KFGFQGSDWGELEG------------IANRTDFDLSAHAEHSGEDLS-----YFNQATGE 314

Query: 517 KCHPVMIHRAVFGSIERFIGIMIENFK----------------GNLPLWLSPIQAIVTTI 560
           K  P +I     G     +  +++ +                  +L   L+P++A V  +
Sbjct: 315 KYVPYVIE-PAAGLTRSLMCFLVDAYDVDEAPNTKGGVDKRTVLHLDPRLAPVKAAVLPL 373

Query: 561 TSSAV--EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERS 618
           +        AQ++A  L+ +   I+ D     I  + R       P+ +        +++
Sbjct: 374 SKKPDLQNVAQKLAADLRQNEWMIDYDEAGA-IGRRYRREDEIGTPLCVTVDFDTLDDQA 432

Query: 619 IGIRRFGSTTTQKVSLLDAIPILTK 643
           + IR   +   ++VSL      + +
Sbjct: 433 VTIRERDTMQQERVSLDKVADYIAE 457


>gi|283782944|ref|YP_003373698.1| glycine--tRNA ligase [Gardnerella vaginalis 409-05]
 gi|297242774|ref|ZP_06926712.1| glycyl-tRNA synthetase [Gardnerella vaginalis AMD]
 gi|283441426|gb|ADB13892.1| glycine--tRNA ligase [Gardnerella vaginalis 409-05]
 gi|296888985|gb|EFH27719.1| glycyl-tRNA synthetase [Gardnerella vaginalis AMD]
          Length = 506

 Score = 80.2 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 59/379 (15%), Positives = 114/379 (30%), Gaps = 48/379 (12%)

Query: 278 TLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALK 337
            L      K  D   E     +       +    +    NM           +     L+
Sbjct: 102 KLEESYAEKHGDKMPENGLKDIACPDCGTRGNWTEPRDFNMMLRTHLGPVEDENSLHYLR 161

Query: 338 PMNCPGHVAVFNHGLKSYRELP-VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT 396
           P    G    F + + S R+ P   +A  G  +RNE +   + + R R F Q +   F  
Sbjct: 162 PETAQGIFVDFKNVMTSTRQKPPFGIANIGKSFRNEITPG-NFIFRTREFEQMEMEFFVE 220

Query: 397 KEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIK 456
                       +  +  Y D G +   +++   P+         +   +  K  +D   
Sbjct: 221 PGTDEAWHQYWIDTRVRWYVDLGVKPENLRMYEHPK---------EKLSHYSKRTVDIEY 271

Query: 457 NSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE 516
                  + G L G            + +    D          +L      ++  +  E
Sbjct: 272 KFGFQGSDWGELEG------------IANRTDYDLSAHAKHSGEDLS-----YFNQATGE 314

Query: 517 KCHPVMIHRAVFGSIERFIGIMIENFK----------------GNLPLWLSPIQAIVTTI 560
           K  P +I     G     +  +++ +                   L   L+P++A V  +
Sbjct: 315 KYVPYVIE-PAAGLTRSLMAFLVDAYDVDEAPNTKGGVDKRTVLRLDPRLAPVKAAVLPL 373

Query: 561 TSSAV--EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERS 618
           +        AQ++A  L+ H   I+ D     I  + R       P+ +        + +
Sbjct: 374 SKKPELQAVAQDLAADLRQHDWVIDYDEAGA-IGRRYRREDEIGTPLCVTVDFDTLEDHA 432

Query: 619 IGIRRFGSTTTQKVSLLDA 637
           + IR   +   ++VSL   
Sbjct: 433 VTIRERDTMQQERVSLDKV 451


>gi|41053997|ref|NP_956209.1| 39S ribosomal protein L39, mitochondrial [Danio rerio]
 gi|31418760|gb|AAH53133.1| Mitochondrial ribosomal protein L39 [Danio rerio]
 gi|141795804|gb|AAI34914.1| Mrpl39 protein [Danio rerio]
 gi|220673071|emb|CAX13743.1| mitochondrial ribosomal protein L39 [Danio rerio]
          Length = 342

 Score = 80.2 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 42/240 (17%), Positives = 82/240 (34%), Gaps = 24/240 (10%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSL---AVIRHS 76
           +T    A  +S      +    ++G+   +  P+     + ++T  D            S
Sbjct: 76  STPYSCARHLSEWHVNSSALALVDGQPWHMHKPLTRSCELTLLTFRDADPQTLNQAYWRS 135

Query: 77  CAHIMAEAVQSIWPEVQV------AIGPIIEDGFYYDFDKE-----QPFSSDELAQIEKK 125
           CA ++   ++S + +            P+    F  D   +        + + L  + + 
Sbjct: 136 CAALLGLVLESAFKDQFSVELLKTPEVPVTAGAFCCDLLLDPLLDSWKPTEENLRSLTRD 195

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPA---KENVTLYRQGEWFDL 182
             ++I+RD P+    +S   A E+    +   K E +E   A      VTLYR G+   L
Sbjct: 196 ALQMISRDLPWEPLEVSASLALEI--FSQSRCKQEEVEEAAAQSQNGTVTLYRCGDHVTL 253

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
              P V  TG   +F    +V   +   +  R +  R  G +          ++      
Sbjct: 254 SSAPLVSRTGLCSQF----EVTSIHTLSEHTRGVQRRAQGLSLPVNLTAHHTVWRKLRKR 309


>gi|119026156|ref|YP_910001.1| glycyl-tRNA synthetase [Bifidobacterium adolescentis ATCC 15703]
 gi|118765740|dbj|BAF39919.1| glycyl-tRNA synthetase [Bifidobacterium adolescentis ATCC 15703]
          Length = 491

 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 57/385 (14%), Positives = 117/385 (30%), Gaps = 48/385 (12%)

Query: 278 TLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALK 337
            L      K  D   E     ++      +    +    NM           +     L+
Sbjct: 102 KLEESYAEKHGDKLPENGMADIVCPDCGTRGKWTEPRDFNMMLRTHLGPVEDENSLHYLR 161

Query: 338 PMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT 396
           P    G    F +    S ++ P  +A  G  +RNE +   + + R R F Q +   F  
Sbjct: 162 PETAQGIFVDFKNVMTSSRKKPPFGIANMGKSFRNEITPG-NFIFRTREFEQMEMEFFVK 220

Query: 397 KEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIK 456
             +         +     Y D G +   ++    P+         +   +  K  +D   
Sbjct: 221 PGEDEAWHQYWIDARTQWYLDLGVKPENLRHYEHPK---------EKLAHYSKRTVDIEY 271

Query: 457 NSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE 516
                  + G L G            + +    D          +L      ++  +  E
Sbjct: 272 KFGFQGSDWGELEG------------IANRTDFDLSAHAEHSGEDLS-----YFNQATGE 314

Query: 517 KCHPVMIHRAVFGSIERFIGIMIENFK----------------GNLPLWLSPIQAIVTTI 560
           K  P +I     G     +  +++ +                  +L   L+P++A V  +
Sbjct: 315 KYVPYVIE-PAAGLTRSLMCFLVDAYDVDEAPNTKGGVDKRTVLHLDPRLAPVKAAVLPL 373

Query: 561 TSSAV--EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERS 618
           +        AQ++A  L+ +   I+ D     I  + R       P+ +        +++
Sbjct: 374 SKKPDLQSVAQKLAADLRQNEWMIDYDEAGA-IGRRYRREDEIGTPLCVTVDFDTLDDQA 432

Query: 619 IGIRRFGSTTTQKVSLLDAIPILTK 643
           + IR   +   ++VSL      + +
Sbjct: 433 VTIRERDTMQQERVSLDKVADYIAE 457


>gi|319440593|ref|ZP_07989749.1| glycyl-tRNA synthetase [Corynebacterium variabile DSM 44702]
          Length = 460

 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 70/382 (18%), Positives = 125/382 (32%), Gaps = 41/382 (10%)

Query: 277 QTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF-A 335
             L +Y  +   +         + D    Q  G W   +A    +K     + D      
Sbjct: 102 HLLEAYEEKHGHE--APNGLADINDPDTGQ-PGKWTEPKAFSGLMKTYLGPVDDKEGLHY 158

Query: 336 LKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           L+P    G    F +    S  + P  +A  G  +RNE +   + + R R F Q +   F
Sbjct: 159 LRPETAQGIFINFKNVMGASRSKPPFGIANTGKSFRNEITPG-NFIFRTREFEQMEMEFF 217

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDT 454
               +      K  +   + Y + G +   ++L   P+         +   +  K  +D 
Sbjct: 218 VKPGEDEEWHQKWIDDRYNWYVNLGIDPENLRLFEHPQ---------EKLSHYSKRTVDV 268

Query: 455 IKNSSQDRINTGVLLGEG--AFYGPKF-------EYILKD-AIGRDWQCGTIQVDFNLPS 504
                      G L G      Y  K        +    D A G  W    I+    L  
Sbjct: 269 EYAFGFTGSKWGELEGIANRTDYDLKTHMEHSGEDLSFFDQATGERWIPYVIEPAAGLGR 328

Query: 505 RFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA 564
              AF V+++SE   P        G  +R +          L   LSP++  V  ++   
Sbjct: 329 AMMAFLVDAYSEDEAPNTKG----GVDKRVV--------LRLDRRLSPVKVAVLPLSKKE 376

Query: 565 V--EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
                A++IA+ L++   +++ D     I  + R       P  +        + ++ +R
Sbjct: 377 TLTPTAEKIADDLRAL-WNVDYDTSGA-IGRRYRRQDEIGTPFCVTVDFDTLEDNAVTVR 434

Query: 623 RFGSTTTQKVSLLDAIPILTKE 644
              +   ++VSL      L  E
Sbjct: 435 ERDTMNQERVSLDKLQSYLAAE 456


>gi|229019013|ref|ZP_04175855.1| Prolyl-tRNA synthetase [Bacillus cereus AH1273]
 gi|228742341|gb|EEL92499.1| Prolyl-tRNA synthetase [Bacillus cereus AH1273]
          Length = 445

 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 61/157 (38%), Gaps = 11/157 (7%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G +  +        NA +++ +  K  P+++     G   R +  + E F     
Sbjct: 283 RGIEVGHVFKLGTRYSEAMNATFLDENG-KTKPLIMGCYGIGVS-RTVAAIAEQFNDENG 340

Query: 546 --LPLWLSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              P  ++P    V  +   + +  E  + I N L+     +  D R E    K  +  +
Sbjct: 341 LVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERAGVKFADADL 400

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
             +P+ +  G K A E  + ++   +  +++V + + 
Sbjct: 401 FGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEEL 436



 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 41/94 (43%), Gaps = 2/94 (2%)

Query: 353 KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC-TKEQMFNECLKIHNLI 411
           KSY++LP+ L +  + +R+E      GL+R R F   DA+ F  T+E +     +++   
Sbjct: 2   KSYKKLPLTLYQIQTKFRDEQRPRF-GLLRGREFLMKDAYSFHATQESLDEVYDRLYKAY 60

Query: 412 ISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
            +I+   G     V   +       +      +E
Sbjct: 61  SNIFARCGLNFRAVIADSGAMGGKDTHEFMVLSE 94


>gi|229817347|ref|ZP_04447629.1| hypothetical protein BIFANG_02609 [Bifidobacterium angulatum DSM
           20098]
 gi|229785136|gb|EEP21250.1| hypothetical protein BIFANG_02609 [Bifidobacterium angulatum DSM
           20098]
          Length = 491

 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 58/385 (15%), Positives = 116/385 (30%), Gaps = 48/385 (12%)

Query: 278 TLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALK 337
            L      K  D   E     +       +    +    NM           +     L+
Sbjct: 102 KLEESYAEKHGDKLPENGMADIACPDCGTRGKWTEPRDFNMMLRTHLGPVEDENSLHYLR 161

Query: 338 PMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT 396
           P    G    F +    S ++ P  +A  G  +RNE +   + + R R F Q +   F  
Sbjct: 162 PETAQGIFVDFKNVMTSSRKKPPFGIANMGKSFRNEITPG-NFIFRTREFEQMEMEFFVK 220

Query: 397 KEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIK 456
             +         +     Y D G +   ++    P+         +   +  K  +D   
Sbjct: 221 PGEDEAWHQYWIDARTQWYLDLGVKPENLRHYEHPK---------EKLAHYSKRTVDIEY 271

Query: 457 NSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE 516
                  + G L G            + +    D          +L      ++  +  E
Sbjct: 272 KFGFQGSDWGELEG------------VANRTDFDLSAHAKHSGEDLS-----YFNQATGE 314

Query: 517 KCHPVMIHRAVFGSIERFIGIMIENFK----------------GNLPLWLSPIQAIVTTI 560
           K  P +I     G     +  +++ +                  +L   L+P++A V  +
Sbjct: 315 KYVPYVIE-PAAGLTRSLMCFLVDAYDVDEAPNTKGGVDKRTVLHLDPRLAPVKAAVLPL 373

Query: 561 TSSAV--EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERS 618
           +        AQ++A  L+ H   I+ D     I  + R       P+ +        +++
Sbjct: 374 SKKPDLQNVAQKLAADLRQHEWMIDYDEAGA-IGRRYRREDEIGTPLCVTVDFDTLDDQA 432

Query: 619 IGIRRFGSTTTQKVSLLDAIPILTK 643
           + IR   +   ++VSL      + +
Sbjct: 433 VTIRERDTMQQERVSLDKVADYVAE 457


>gi|323704183|ref|ZP_08115762.1| glycyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum LX-11]
 gi|323536249|gb|EGB26021.1| glycyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum LX-11]
          Length = 462

 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 55/338 (16%), Positives = 106/338 (31%), Gaps = 50/338 (14%)

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEP 373
           + N+        T        L+P    G    F + L+ S +++P  + + G  +RNE 
Sbjct: 150 KFNLMFKTFQGVTEDSKSEIYLRPETAQGIFVNFKNVLRTSRKKIPFGIGQIGKSFRNEI 209

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP 431
           +   +   R R F Q +   FC    +  +    K   +   +      E +  +  ++ 
Sbjct: 210 TPG-NFTFRTREFEQMELEFFCKPGEDLEWFNYWKEFCMNWLLNLGLRKENLRFRDHSKE 268

Query: 432 EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDW 491
           E    S+A  D                    I      G G  +G       +       
Sbjct: 269 ELSHYSNATTD--------------------IEYRFPFGWGELWG----IADRTDFDLRR 304

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK-------- 543
                  D      F+       +EK  P  I     G+    +  +I+ +         
Sbjct: 305 HMEHSGADLTY---FDPVT----NEKYTPYCIE-PSVGADRVALAFLIDAYNEEVVEEND 356

Query: 544 ----GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
                 L   LSPI+A V  ++    E A ++ + L+     ++ D    +I  + R   
Sbjct: 357 TRVVLKLHPALSPIKAAVLPLSKKLGENAYKLYDELRK-DFVVDYDETG-SIGKRYRRQD 414

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
               P  I       ++ S+ IR   +    ++ + + 
Sbjct: 415 EIGTPYCITYDFDSLNDESVTIRDRDTMQQIRIKINEV 452


>gi|300743942|ref|ZP_07072962.1| glycine--tRNA ligase [Rothia dentocariosa M567]
 gi|300380303|gb|EFJ76866.1| glycine--tRNA ligase [Rothia dentocariosa M567]
          Length = 459

 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 63/380 (16%), Positives = 127/380 (33%), Gaps = 42/380 (11%)

Query: 277 QTLISYMRRK--IKDDYEEINTPQVLDQHLWQQ----SGHWDSYRANMFAVKCADDTIKD 330
             + ++  +K    ++  E+  P    +  W +    SG   +Y               +
Sbjct: 103 HLIEAFEAKKGRAPENMGEVVCPNCGTRGEWTEPQNFSGLLKTY---------LGPVDNE 153

Query: 331 LRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
                L+P    G    FN+ + +  +  P  + + G  +RNE +   + + R R F Q 
Sbjct: 154 EGLHFLRPETAQGIFVNFNNVVTAARKRPPFGIGQIGKAFRNEITPG-NFIFRTREFEQM 212

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKL-----STRPEKRVGSDALWDDA 444
           +   F   ++             + + D G     ++        R     G+  +    
Sbjct: 213 EIEYFVHPDEADKHFDAWVEDCWNWFVDLGINPENMRRFDVPEDDRAHYSAGTIDIEYRF 272

Query: 445 ENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPS 504
                   + +  +++   + GV          K EY  + A G  +    I+  F L  
Sbjct: 273 GFQGGEWGELMGVANRTDYDLGVHNEHS---NAKLEYFDQ-ASGERYVPYVIEPSFGLTR 328

Query: 505 RFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA 564
              AF V+++ E   P        G  +R +          L   L+P++A V  ++   
Sbjct: 329 SMMAFLVDAYVEDEAPNTKG----GVDKRVV--------LKLDPRLAPVKAAVLPLSKKP 376

Query: 565 V--EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
              E A ++A  L     +I+ D     I  + R       P  I        ++++ IR
Sbjct: 377 ELSEPAHKLAADLCGA-WNIDYDEAGA-IGRRYRRQDEIGTPFCITVDFDTLEDQAVTIR 434

Query: 623 RFGSTTTQKVSLLDAIPILT 642
              + + ++V+L      L 
Sbjct: 435 ERDTMSQERVALDQVKAYLA 454


>gi|254520543|ref|ZP_05132599.1| glycyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
 gi|226914292|gb|EEH99493.1| glycyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
          Length = 463

 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 49/342 (14%), Positives = 111/342 (32%), Gaps = 46/342 (13%)

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEP 373
           + N+        T     T  L+P    G    F    + S +++P  +A+ G  +RNE 
Sbjct: 151 KFNLMFKTFQGITEDSASTIYLRPETAQGIFVNFKSVQRTSRKKVPFGIAQVGKSFRNEI 210

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
           +   +   R R F Q +   FC             +   +   + G ++  +++      
Sbjct: 211 TPG-NFTFRTREFEQMELEFFCKPGTDLEWFKYWKDYCWNFLLNLGVQQDNLRMRDH--- 266

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
             G + L             +  +++   I      G G  +G   +    D        
Sbjct: 267 --GEEEL-------------SFYSNATSDIEYLFPFGWGELWGIA-DRTDYDLKKHQEHS 310

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK---------- 543
           G            +  Y++  + + +   +     G+    +  +++ +           
Sbjct: 311 GQ-----------DMSYLDPSTNEKYVPYVIEPSLGADRVALAFLVDAYDEEELEGGDVR 359

Query: 544 --GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
              +L   L+P +A +  ++    E A ++ + L     +IE D    +I  + R     
Sbjct: 360 TVMHLHPALAPYKAAILPLSKKLSEKALDVYSDLSKK-FNIEYDEAG-SIGKRYRRQDEI 417

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             P  I        + ++ IR   +   +++ + D    + K
Sbjct: 418 GTPFCITIDFDTLEDEAVTIRNRDTMEQERIKISDLEAYIEK 459


>gi|10442117|gb|AAG17334.1|AF265558_1 threonyl tRNA synthetase [Mycobacterium smegmatis]
          Length = 89

 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 35/68 (51%)

Query: 576 KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
           KS  + +E D  ++ +  KI  H+  K+P +++ GDK+A   ++  R    T    V   
Sbjct: 1   KSRGVRVEVDSSDDRMAKKIVNHTNMKVPFMLLAGDKDAEAGAVSFRLGDRTQINGVPRD 60

Query: 636 DAIPILTK 643
           +A+ ++ +
Sbjct: 61  EAVEMIVR 68


>gi|307266972|ref|ZP_07548489.1| glycyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306918021|gb|EFN48278.1| glycyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 462

 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 56/391 (14%), Positives = 122/391 (31%), Gaps = 59/391 (15%)

Query: 277 QTLISYMRRKIKDDYEEINT-PQVLD--QHLWQQSGHWDSY------RANMFAVKCADDT 327
           Q +  Y++ K  +   E  T  Q+++  +          +Y      + N+        T
Sbjct: 103 QLIEDYIKEKELNISIEGWTNEQLMEFIKEHKVPCPKCGAYNFTDIRKFNLMFKTYQGVT 162

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
                   L+P    G    F +  ++  +++P  + + G  +RNE +   + + R R F
Sbjct: 163 EDSKSEVYLRPETAQGIFVNFKNVQRTTRKKIPFGIGQIGKSFRNEITPG-NFIFRTREF 221

Query: 387 TQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
            Q +   FC    +  +    + + +   +      E +  +   + E    S A  D  
Sbjct: 222 EQMELEFFCKPGEDMEWFSYWRKYCMDWLLEFGLKEENLRFRDHKKEELSHYSTATTD-- 279

Query: 445 ENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPS 504
                             I      G G  +G             +     + + +  P 
Sbjct: 280 ------------------IEYNFPFGWGELWGIANRTDFDLRQHMEHS--GVDLSYMDPV 319

Query: 505 RFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP------------LWLSP 552
                      EK  P  I     G     +  +I+ ++                  L+P
Sbjct: 320 T---------GEKYIPYCIE-PSVGVDRLMLAFLIDAYEEEELEDGETRVVLRLHPALAP 369

Query: 553 IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
           I+A V  ++    E A ++ + L++    ++ D    +I  + R       P  I     
Sbjct: 370 IKAAVLPLSKKLSENAYKLYDQLRNK-FVVDYDETG-SIGKRYRRQDEIGTPFCITYDFD 427

Query: 613 EASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             ++  + IR   +    ++ + +    L +
Sbjct: 428 SENDHCVTIRDRDTMEQVRIKIEEVEKYLEE 458


>gi|255012924|ref|ZP_05285050.1| glycyl-tRNA synthetase [Bacteroides sp. 2_1_7]
 gi|298374179|ref|ZP_06984137.1| glycine--tRNA ligase [Bacteroides sp. 3_1_19]
 gi|298268547|gb|EFI10202.1| glycine--tRNA ligase [Bacteroides sp. 3_1_19]
          Length = 514

 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 56/331 (16%), Positives = 106/331 (32%), Gaps = 26/331 (7%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    F +  K+   ++P  +A+ G  +RNE  
Sbjct: 194 FNLMFSTDMGSTADGATKIYLRPETAQGIFVNFLNVQKTGRMKIPFGIAQIGKAFRNEIV 253

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
            +   + R+R F Q +   F    +      K  +  +  ++  G      +     +  
Sbjct: 254 -ARQFIFRMREFEQMEMQFFVRPGEEIEWFKKWKSTRLKWHQALGLGDQKYRYHDHEKLA 312

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
             ++A  D                 +  +  G    EG      F+     +    +   
Sbjct: 313 HYANAATDI----------------EFEMPFGFKEVEGIHSRTNFDL----SQHEKFSGK 352

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQ 554
            IQ      ++    YV   S     V +        E  +          LP  L+PI+
Sbjct: 353 KIQYFDPELNQSYTPYVIETSIGVDRVFLSIMAGSYCEETLANGESRVVLKLPAALAPIK 412

Query: 555 AIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
             V  +       E A+EI N+L+      + D ++ +I  + R       P  I     
Sbjct: 413 LAVLPLVKKDGLPEKAEEIINMLR-FDFRCQYDEKD-SIGKRYRRQDAIGTPYCITVDHD 470

Query: 613 EASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              +  + IR   +   ++VS+     I+T+
Sbjct: 471 TLKDNCVTIRFRDTMEQERVSIDKLHDIITE 501


>gi|226307195|ref|YP_002767155.1| glycyl-tRNA synthetase [Rhodococcus erythropolis PR4]
 gi|229493158|ref|ZP_04386950.1| glycyl-tRNA synthetase [Rhodococcus erythropolis SK121]
 gi|226186312|dbj|BAH34416.1| glycyl-tRNA synthetase [Rhodococcus erythropolis PR4]
 gi|229319889|gb|EEN85718.1| glycyl-tRNA synthetase [Rhodococcus erythropolis SK121]
          Length = 463

 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 57/382 (14%), Positives = 120/382 (31%), Gaps = 49/382 (12%)

Query: 280 ISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPM 339
            +Y  +K  D+ ++++   +            +    NM           +     L+P 
Sbjct: 106 EAYAEKKKLDNPDDVSMDVIGCPDCGTVGQWTEPRDFNMMLKTYLGPVESEEGMHYLRPE 165

Query: 340 NCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE 398
              G    F + L  S ++ P  + + G  +RNE +   + + R R F Q +   F    
Sbjct: 166 TAQGIFVNFANVLTTSRKKPPFGIGQIGKSFRNEITPG-NFIFRTREFEQMEMEFFVKPG 224

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNS 458
           +         +  +  Y   G  K  ++L              +   +  KG  D     
Sbjct: 225 EDEQWHQYWIDYRLDWYTGLGINKDNLRLYEHAP---------EKLSHYSKGTTDIEYRF 275

Query: 459 SQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC 518
                  G L G            + +    D    +      L      +Y  +  E+ 
Sbjct: 276 HFQGSEWGELEG------------IANRTDFDLSTHSKHSGTELN-----YYDQTTGERY 318

Query: 519 HPVMIHRAVFGSIERFIGIMIENFKGNLPLW----------------LSPIQAIVTTITS 562
            P +I     G     +  +++ +  +                    L+P++A V  ++ 
Sbjct: 319 TPYVIE-PAAGLTRSLMAFLVDAYTEDEAPNSKGGVDKRTVLRLDRRLAPVKAAVLPLSR 377

Query: 563 SAV--EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
           +A     A+++A  L+  + ++E D     I  + R       P  I        ++++ 
Sbjct: 378 NADLTPKAKDLAAQLR-QNWNVEFDDAGA-IGRRYRRQDEIGTPFCITVDFDTLEDQAVT 435

Query: 621 IRRFGSTTTQKVSLLDAIPILT 642
           +R   S   ++V+L      L 
Sbjct: 436 VRERDSMAQERVALDQVESYLA 457


>gi|312135208|ref|YP_004002546.1| glycyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
 gi|311775259|gb|ADQ04746.1| glycyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
          Length = 434

 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 69/450 (15%), Positives = 148/450 (32%), Gaps = 91/450 (20%)

Query: 251 REMDLFH---IAEDGSGVIFWHRKGWKIFQTLISYMRR---KIKDDYEEINTPQVLDQHL 304
           R   +F    I    +    +   G ++   +     +   +++DD   +++  +++  +
Sbjct: 13  RRGFIFQSSEIYGGLNSCWDYGPLGVEMKNNIKRLWWKANVQLRDDVVGLDSSILMNPKV 72

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA---VFNHGLKSY------ 355
           W+ SGH  ++   M   K      +  +    K   C G +    +FN   K++      
Sbjct: 73  WEASGHLSNFADPMADCKVCKKRWRTDQLQEYKCPECGGELTEARMFNLMFKTFMGPVEE 132

Query: 356 ---------------------------RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQ 388
                                      ++LP  +A+ G  +RNE +   + + R R F Q
Sbjct: 133 ESAVVYLRPETAQGIFVNFVNVQQTMRKKLPFGIAQIGKSFRNEITPG-NFIFRTREFEQ 191

Query: 389 DDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIM 448
            +   F              +  I+ Y   G  K  +++        G D L   A+  +
Sbjct: 192 MEIEYFVKPGTDDYWHRHWIDQRINWYYKLGIRKENLRIREH-----GKDELAHYAKACV 246

Query: 449 K-GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFN 507
               L  +  S  + I              + ++ L                    S  N
Sbjct: 247 DIEYLFPMGWSELEGI------------ANRTDFDLT--------------QHQKYSGEN 280

Query: 508 AFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK------------GNLPLWLSPIQA 555
             Y +  +++ +   +     G     +  +I+ ++             +L   ++PI+A
Sbjct: 281 LTYFDDETKQRYIPYVIEPSAGVDRSLLAFLIDAYEYQQIDKDDFRVVLHLHPAIAPIKA 340

Query: 556 IVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
            V  +      V+ A+EI N LK   + ++ D    +I  + R       P  I    + 
Sbjct: 341 AVFPLLKKEELVKKAKEIYNELKYKWI-VQYDESG-SIGKRYRRQDEIGTPFGITVDYQT 398

Query: 614 ASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             + ++ IR   +    +V + + I  L +
Sbjct: 399 LEDETVTIRDRDTMEQVRVHIKEIISYLEE 428


>gi|295104663|emb|CBL02207.1| glycyl-tRNA synthetase [Faecalibacterium prausnitzii SL3/3]
          Length = 473

 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 52/348 (14%), Positives = 104/348 (29%), Gaps = 57/348 (16%)

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEP 373
           + N+        T     T  L+P    G    F +  ++  R+LP  + + G  +RNE 
Sbjct: 148 KFNLMFKTAIGVTEDSSSTCYLRPETAQGIFVNFANIQRTTRRKLPFGVCQVGKAFRNEI 207

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
           +   +   R R F Q +   FC      +      +   +     G +K  ++L      
Sbjct: 208 TPG-NFTFRTREFEQMECEFFCKPGTDLDWFAYWKDYCENWLLSLGIKKEHLRLRDHEPA 266

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
            +   A +  A   ++             I       +   Y                  
Sbjct: 267 EL---AFYSRATTDIEYAFPFTDWGELWGI------ADRTNYDLT--------------- 302

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE--------NFKGN 545
                     S  +  Y +S + + +   +     G     +  + E        + KG 
Sbjct: 303 -----RHQEASGKSLEYFDSETNEHYIPYVIEPSLGCDRVALAFLCEAYDEEHLTDSKGK 357

Query: 546 LP--------LWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
                       L+P +  V  ++    E A EI N L  +   ++ D    +I  + R 
Sbjct: 358 EDVRTVLRLHPALAPYKCAVLPLSKKLGEKAMEIRNELSKY-FMVDYDDTG-SIGKRYRR 415

Query: 598 HSIKKIPIIIIC-----GDKE---ASERSIGIRRFGSTTTQKVSLLDA 637
                 P  I       GD+    A++  + +R   +    ++ + + 
Sbjct: 416 EDEIGTPFCITVDFDTVGDEAKGIAADNCVTVRDRDTMEQVRMPISEL 463


>gi|115491451|ref|XP_001210353.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|114197213|gb|EAU38913.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 564

 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/181 (18%), Positives = 60/181 (33%), Gaps = 36/181 (19%)

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHLW 305
           +  L R   L    +  SG+      G ++   L   + + ++                 
Sbjct: 27  NDLLIRGGFLR---QAYSGIFHMLPLGLRVQDKLERLIDKHMR----------------- 66

Query: 306 QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEF 365
                       +  ++      +    F L P +      +     KSYR+LP+R+ + 
Sbjct: 67  ------------LLDMQVFRFLDRKESRFLLAPTHEEEITTLVGSLTKSYRDLPLRVYQI 114

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
              YR+EP     GL+R R F   D + F   +    E LK +  + + Y     E  + 
Sbjct: 115 SRKYRDEPRPR-QGLLRGREFIMKDLYTF---DYSMEEALKTYGQVRAAYTRLFNELKIP 170

Query: 426 K 426
            
Sbjct: 171 Y 171



 Score = 60.6 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 21/148 (14%), Positives = 60/148 (40%), Gaps = 11/148 (7%)

Query: 507 NAFYVNSHSEKCHPVMIHRAVFGSIERFIGI---MIENFKGNLPLWLSPIQAIVTTITSS 563
           +        ++  P+ +     G       +   + ++   N P  ++P + IV      
Sbjct: 417 DRATAGKSEDQTVPMEMGCHGIGVSRMITAVADSLADSKGLNWPRAMAPYEVIVVPTKGL 476

Query: 564 AVEYAQEIANLLKSHH---LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
             + A++I ++L S+         D R++ + +K+ +  +   P+I++ G     ++++ 
Sbjct: 477 EAD-AEKIYDVLASNPTSPFDTILDDRDKQMGWKLGDADLIGYPVIVVVGKGWKKQQTVE 535

Query: 621 IR-RFGSTTTQKVSLL---DAIPILTKE 644
           ++ R  +   + V L    + +  L  +
Sbjct: 536 VQCRRLNNLRENVPLERLPEFVNSLLAQ 563


>gi|160943130|ref|ZP_02090367.1| hypothetical protein FAEPRAM212_00610 [Faecalibacterium prausnitzii
           M21/2]
 gi|158445599|gb|EDP22602.1| hypothetical protein FAEPRAM212_00610 [Faecalibacterium prausnitzii
           M21/2]
          Length = 473

 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 51/348 (14%), Positives = 104/348 (29%), Gaps = 57/348 (16%)

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEP 373
           + N+        T     T  L+P    G    F +  ++  R+LP  + + G  +RNE 
Sbjct: 148 KFNLMFKTAIGVTEDSSSTCYLRPETAQGIFVNFANIQRTTRRKLPFGVCQVGKAFRNEI 207

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
           +   +   R R F Q +   FC      +      +   +     G +K  ++L      
Sbjct: 208 TPG-NFTFRTREFEQMECEFFCKPGTDLDWFAYWKDYCENWLLSLGIKKEHLRLRDHEPA 266

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
            +   A +  A   ++             I       +   Y                  
Sbjct: 267 EL---AFYSRATTDIEYAFPFTDWGELWGI------ADRTNYDLT--------------- 302

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK---------- 543
                     S  +  Y +S + + +   +     G     +  + E +           
Sbjct: 303 -----RHQEASGKSLEYFDSETNEHYIPYVIEPSLGCDRVALAFLCEAYDEEHLTDSKGK 357

Query: 544 ------GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
                  +L   L+P +  V  ++    E A EI N L  +   ++ D    +I  + R 
Sbjct: 358 EDIRTVLHLHPALAPYKCAVLPLSKKLGEKAMEIRNELSKY-FMVDYDDTG-SIGKRYRR 415

Query: 598 HSIKKIPIIIIC-----GDKE---ASERSIGIRRFGSTTTQKVSLLDA 637
                 P  I       GD+    A++  + +R   +    ++ + + 
Sbjct: 416 EDEIGTPFCITVDFDTVGDEAKGIAADNCVTVRDRDTMEQVRMPISEL 463


>gi|167469761|ref|ZP_02334465.1| threonyl-tRNA synthetase [Yersinia pestis FV-1]
          Length = 53

 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 3/55 (5%)

Query: 1  MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR 55
          MP    +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D SD + 
Sbjct: 1  MPV---ITLPDGSQRHYDHAVSVLDVALDIGPGLAKACIAGRVNGELVDASDLIE 52


>gi|225387782|ref|ZP_03757546.1| hypothetical protein CLOSTASPAR_01552 [Clostridium asparagiforme
           DSM 15981]
 gi|225046116|gb|EEG56362.1| hypothetical protein CLOSTASPAR_01552 [Clostridium asparagiforme
           DSM 15981]
          Length = 462

 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 45/335 (13%), Positives = 100/335 (29%), Gaps = 46/335 (13%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPS 374
            N+        T     T  L+P    G    F +  + S +++P  + + G  +RNE +
Sbjct: 151 FNLMFKTFQGVTEDAKNTVYLRPETAQGIFVNFKNVQRTSRKKVPFGIGQIGKSFRNEIT 210

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              +   R R F Q +   FC                I   +  G ++  ++      + 
Sbjct: 211 PG-NFTFRTREFEQMELEFFCKPGTDLEWFAYWKQFCIDWLRTLGIKEDEMRARDHSPEE 269

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           +     +  A   +   L          I       +   Y                   
Sbjct: 270 L---CFYSKATTDL-EFLFPFGWGELWGI------ADRTDYDLT---------------- 303

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI------ENFKGNLPL 548
                    S  +  Y +  S++ +   +     G+    +  +       E  +G++  
Sbjct: 304 ----QHQNVSGQDMTYFDDESKEKYIPYVIEPSLGADRVTLAFLCAAYDEEELAEGDVRT 359

Query: 549 WL------SPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            L      +P++  +  ++    E A+++   L  +  + E D R   I  + R      
Sbjct: 360 VLRFHPAIAPVKIGILPLSKKLNEGAEKVFAELSKY-YNCEFDDRGN-IGKRYRRQDEIG 417

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
            P  I        + ++ +R   +    +V + + 
Sbjct: 418 TPFCITYDFDSEEDHAVTVRDRDTMDQVRVPIAEL 452


>gi|326389845|ref|ZP_08211409.1| glycyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
 gi|325994113|gb|EGD52541.1| glycyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
          Length = 462

 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 56/391 (14%), Positives = 122/391 (31%), Gaps = 59/391 (15%)

Query: 277 QTLISYMRRKIKDDYEEINT-PQVLD--QHLWQQSGHWDSY------RANMFAVKCADDT 327
           Q +  Y++ K  +   E  T  Q+++  +          +Y      + N+        T
Sbjct: 103 QLIEDYIKEKELNISIEGWTNEQLMEFIKEHKVPCPKCGAYNFTDIRKFNLMFKTYQGVT 162

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
                   L+P    G    F +  ++  +++P  + + G  +RNE +   + + R R F
Sbjct: 163 EDSKSEVYLRPETAQGIFVNFKNVQRTTRKKIPFGIGQIGKSFRNEITPG-NFIFRTREF 221

Query: 387 TQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
            Q +   FC    +  +    + + +   +      E +  +   + E    S A  D  
Sbjct: 222 EQMELEFFCKPGEDMEWFSYWRKYCMDWLLEFGLKEENLRFRDHKKEELSHYSTATTD-- 279

Query: 445 ENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPS 504
                             I      G G  +G             +     + + +  P 
Sbjct: 280 ------------------IEYNFPFGWGELWGIANRTDFDLRQHMEHS--GVDLSYMDPV 319

Query: 505 RFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP------------LWLSP 552
                      EK  P  I     G     +  +I+ ++                  L+P
Sbjct: 320 T---------GEKYIPYCIE-PSVGVDRLMLAFLIDAYEEEELEDGETRVVLRLHPALAP 369

Query: 553 IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
           I+A V  ++    E A ++ + L++    ++ D    +I  + R       P  I     
Sbjct: 370 IKAAVLPLSKKLSENAYKLYDQLRNK-FVVDYDETG-SIGKRYRRQDEIGTPFCITYDFD 427

Query: 613 EASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             ++  + IR   +    ++ + +    L +
Sbjct: 428 SENDHCVTIRDRDTMQQVRIKIEEVEKYLEE 458


>gi|53711703|ref|YP_097695.1| glycyl-tRNA synthetase [Bacteroides fragilis YCH46]
 gi|60679942|ref|YP_210086.1| glycyl-tRNA synthetase [Bacteroides fragilis NCTC 9343]
 gi|253564239|ref|ZP_04841696.1| glycyl-tRNA synthetase [Bacteroides sp. 3_2_5]
 gi|265765086|ref|ZP_06093361.1| glycyl-tRNA synthetase [Bacteroides sp. 2_1_16]
 gi|52214568|dbj|BAD47161.1| glycyl-tRNA synthetase [Bacteroides fragilis YCH46]
 gi|60491376|emb|CAH06124.1| putative glycyl-tRNA synthetase [Bacteroides fragilis NCTC 9343]
 gi|251948015|gb|EES88297.1| glycyl-tRNA synthetase [Bacteroides sp. 3_2_5]
 gi|263254470|gb|EEZ25904.1| glycyl-tRNA synthetase [Bacteroides sp. 2_1_16]
 gi|301161467|emb|CBW21007.1| putative glycyl-tRNA synthetase [Bacteroides fragilis 638R]
          Length = 513

 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 57/367 (15%), Positives = 118/367 (32%), Gaps = 55/367 (14%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           +E     +     W +         N+        T        L+P    G    + + 
Sbjct: 175 DEEIACPISGTKNWTEVRQ-----FNLMFSTDMGSTADGSMKIYLRPETAQGIFVNYLNV 229

Query: 352 LKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
            K+   ++P  +A+ G  +RNE   +   + R+R F Q +   F           K   +
Sbjct: 230 QKTGRMKVPFGIAQIGKAFRNEIV-ARQFIFRMREFEQMEMQFFVRPGSELEYFKKWKEI 288

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
            +  +K  GF     +     +    ++A  D                 +  +  G    
Sbjct: 289 RLKWHKALGFGDDHYRFHDHDKLAHYANAATDI----------------EFLMPFGFKEV 332

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           EG      F+               +        +   ++    +E   P +I  ++ G 
Sbjct: 333 EGIHSRTNFD---------------LSQHEKFSGKSIKYFDPELNESYTPYVIETSI-GV 376

Query: 531 IERFIGIM--------IENFK----GNLPLWLSPIQAIVTTI--TSSAVEYAQEIANLLK 576
              F+ IM        +EN +      LP  L+P++  V  +       E A+EI + LK
Sbjct: 377 DRMFLSIMSAAYCEEQLENGESRVVLKLPAALAPVKLAVMPLVKKDGLPEKAREIIDNLK 436

Query: 577 SHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
             H   + D ++ +I  + R       P  +    +   +  + +R   +   ++V++ +
Sbjct: 437 -FHFHCQYDEKD-SIGKRYRRQDAIGTPYCVTVDHQTLEDNCVTLRNRDTMEQERVAISE 494

Query: 637 AIPILTK 643
              I+  
Sbjct: 495 LNNIIAD 501


>gi|257055413|ref|YP_003133245.1| glycyl-tRNA synthetase [Saccharomonospora viridis DSM 43017]
 gi|256585285|gb|ACU96418.1| glycyl-tRNA synthetase [Saccharomonospora viridis DSM 43017]
          Length = 463

 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 53/385 (13%), Positives = 122/385 (31%), Gaps = 48/385 (12%)

Query: 277 QTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFAL 336
           Q    Y  R   +  +E +  QV   +   +  + +    NM           +     L
Sbjct: 102 QLAEEYAERTGAEVVDENDLSQVPCPNCGTRGKYTEPREFNMMLKTFLGPVESEEGLHYL 161

Query: 337 KPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC 395
           +P    G    F +    + ++ P  + + G  +RNE +   + + R R F Q +   F 
Sbjct: 162 RPETAQGIFVNFLNVQTTTRKKPPFGIGQIGKSFRNEITPG-NFIFRTREFEQMEMEFFV 220

Query: 396 TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTI 455
              +         +     Y D G  +  ++    P++++        +    + V    
Sbjct: 221 EPGEDEKWHQYWIDERTEWYVDLGIRRENLRHYEHPKEKL--------SHYSKRTVDIEY 272

Query: 456 KNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS 515
           +         G L G            + +    D    +     +L      ++  +  
Sbjct: 273 RFRFSSGQEWGELEG------------IANRTDFDLTTHSNHSGVDLS-----YFDQASG 315

Query: 516 EKCHPVMIHRAVFGSIERFIGIMIENFK----------------GNLPLWLSPIQAIVTT 559
           ++  P +I     G     +  +++ +                   L   L+P +  V  
Sbjct: 316 QRYRPFVIE-PAAGVGRAMMAFLLDAYTEDEVPNAKGGMDKRVVLKLDPRLAPYKVAVLP 374

Query: 560 ITSSAV--EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASER 617
           ++ +A     A++IA  L+ H  + + D   ++I  + R       P  +        + 
Sbjct: 375 LSRNADLTPKARDIAAQLRKH-WNTDFDD-AQSIGKRYRRQEEIGTPYCVTVDFDTLEDH 432

Query: 618 SIGIRRFGSTTTQKVSLLDAIPILT 642
           ++ +R   +   ++VS+      L 
Sbjct: 433 AVTVRDRDTMAQERVSIDQLESYLA 457


>gi|255010000|ref|ZP_05282126.1| glycyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
 gi|313147793|ref|ZP_07809986.1| glycyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
 gi|313136560|gb|EFR53920.1| glycyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
          Length = 513

 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 57/367 (15%), Positives = 118/367 (32%), Gaps = 55/367 (14%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           +E     +     W +         N+        T        L+P    G    + + 
Sbjct: 175 DEEIACPISGTKNWTEVRQ-----FNLMFSTDMGSTADGAMKIYLRPETAQGIFVNYLNV 229

Query: 352 LKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
            K+   ++P  +A+ G  +RNE   +   + R+R F Q +   F           K   +
Sbjct: 230 QKTGRMKVPFGIAQIGKAFRNEIV-ARQFIFRMREFEQMEMQFFVRPGSELEYFKKWKEI 288

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
            +  +K  GF     +     +    ++A  D                 +  +  G    
Sbjct: 289 RLKWHKALGFGDDHYRFHDHDKLAHYANAATDI----------------EFLMPFGFKEV 332

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           EG      F+               +        +   ++    +E   P +I  ++ G 
Sbjct: 333 EGIHSRTNFD---------------LSQHEKFSGKSIKYFDPELNESYTPYVIETSI-GV 376

Query: 531 IERFIGIM--------IENFK----GNLPLWLSPIQAIVTTI--TSSAVEYAQEIANLLK 576
              F+ IM        +EN +      LP  L+P++  V  +       E A+EI + LK
Sbjct: 377 DRMFLSIMSAAYCEEQLENGESRIVLKLPAALAPVKLAVMPLVKKDGLPEKAREIIDNLK 436

Query: 577 SHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
             H   + D ++ +I  + R       P  +    +   +  + +R   +   ++V++ +
Sbjct: 437 -FHFHCQYDEKD-SIGKRYRRQDAIGTPYCVTVDHQTLEDNCVTLRNRDTMEQERVAISE 494

Query: 637 AIPILTK 643
              I+  
Sbjct: 495 LNNIIAD 501


>gi|323692739|ref|ZP_08106967.1| glycyl-tRNA synthetase [Clostridium symbiosum WAL-14673]
 gi|323503181|gb|EGB19015.1| glycyl-tRNA synthetase [Clostridium symbiosum WAL-14673]
          Length = 462

 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 49/335 (14%), Positives = 103/335 (30%), Gaps = 46/335 (13%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPS 374
            N+        T     T  L+P    G    F +  + S +++P  +A+ G  +RNE +
Sbjct: 151 FNLMFKTFQGVTEDAKNTVYLRPETAQGIFVNFKNVQRTSRKKVPFGIAQVGKSFRNEIT 210

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              +   R R F Q +   FC  +             I+  K  G ++  ++     ++ 
Sbjct: 211 PG-NFTFRTREFEQMELEFFCEPDTDLEWFAYWKEYCINWLKALGIKEDEMRARDHEQEE 269

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           +   + +  A   +   L          I                      A   D+   
Sbjct: 270 L---SFYSKATTDI-EFLFPFGWGELWGI----------------------ADRTDYDLT 303

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLP--- 547
             Q         +  Y +   +  +   +     G+    +  +     E   G      
Sbjct: 304 QHQNTSGQ----DMTYFDDEKKIKYIPYVIEPSLGADRVTLAFLCAAYDEEEIGEGDVRT 359

Query: 548 -----LWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
                  L+P++  V  ++    E A+++ N L  +  + E D R   I  + R      
Sbjct: 360 VLHFHPALAPVKIGVLPLSKKLNEGAEKVYNELCKY-YNCEFDDRGN-IGKRYRRQDEIG 417

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
            P  I       ++ ++ +R   +    +V + + 
Sbjct: 418 TPFCITYDFDSETDGAVTVRDRDTMEQVRVPITEL 452


>gi|240047245|ref|YP_002960633.1| glycyl-tRNA synthetase [Mycoplasma conjunctivae HRC/581]
 gi|239984817|emb|CAT04804.1| Glycyl-tRNA synthetase [Mycoplasma conjunctivae]
          Length = 453

 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 52/338 (15%), Positives = 105/338 (31%), Gaps = 42/338 (12%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR-ELPVRLAEFGSVYRNEPS 374
            N+             ++  L+P    G    F + L+S R +LP  + + G  +RNE +
Sbjct: 144 FNLLFETQQGVVENQKQSIYLRPETAQGIFINFQNILRSTRTKLPFAVGQIGKAFRNEIT 203

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              + + R R F Q +  VFC       +  KI+ L +    +F  +  +   + R    
Sbjct: 204 PG-NFIFRTREFEQMELEVFCHP----QDSNKIYQLYLEKVGNFLQQVGLKSDNVRLRHH 258

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
             S    + A                     G+                           
Sbjct: 259 QES----ELAHYSNATADYEFNFGFGWGELYGIAHRGDFD-------------------- 294

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM---------IENFKGN 545
            +Q       +   +   + ++K  P +I     G     + I+          + +   
Sbjct: 295 -LQTHQKYSGQKMDYLDLTTNQKIVPHVIE-PSVGLDRLMLSILENSFEYEEENDRYLLK 352

Query: 546 LPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPI 605
               ++P +  V  +       A +I   L ++ +S        +I  + R+      P 
Sbjct: 353 FNYKMAPYKVAVLPLVKKLSPQAYQIFENLLTNKISA-IFEEANSIGKRYRQQDAIGTPF 411

Query: 606 IIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            I       ++ S+ IR   S   ++++L   +  L K
Sbjct: 412 CITFDYDSLNDNSVTIRYRDSMQQERIALDKIVDFLNK 449


>gi|260903902|ref|ZP_05912224.1| glycyl-tRNA synthetase [Brevibacterium linens BL2]
          Length = 459

 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 58/364 (15%), Positives = 127/364 (34%), Gaps = 32/364 (8%)

Query: 288 KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
           ++   +I  P   ++  W +   +                  +     L+P    G    
Sbjct: 116 ENGMADIVCPDCGNRGQWTEPQEFSG-----LVKTFLGPVESEAGLNYLRPETAQGIFVN 170

Query: 348 FNHGLKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           FN+ + +  ++ P  + + G  +RNE +   + + R R F Q +   F   ++  +   +
Sbjct: 171 FNNVVTAARKKPPFGIGQIGKAFRNEITPG-NFIFRTREFEQMELEYFVRPDEADDYYRE 229

Query: 407 IHNLIISIYKDFGFEKIMVKL-----STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD 461
                 + + D G  +  V+        R     G+  +            + +  +++ 
Sbjct: 230 WVEACWNWFLDLGISEDNVRRLDVPEDDRAHYSSGTIDVEYRFGFQGSEWGELMGVANRT 289

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
             + G         G K +Y  + A G  +    I+  F L     AF +++++E   P 
Sbjct: 290 DYDLGTHTEAS---GAKLQYFDQ-ASGERFTPYVIEPSFGLTRSMMAFLIDAYTEDEAPN 345

Query: 522 MIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT--SSAVEYAQEIANLLKSHH 579
                  G  +R +          L   L+P++A V  ++        A+E+A  L+   
Sbjct: 346 TKG----GVDKRIV--------LKLDPRLAPVKAAVLPLSRNEKLSPQAKELAARLRKR- 392

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
            +I+ D     I  + R       P+ I        + ++ IR+    + ++VS+     
Sbjct: 393 WNIDFDDAGA-IGRRYRRQDEVGTPLCITFDFDSLDDNAVTIRKRDDMSQERVSIDQVEN 451

Query: 640 ILTK 643
            L +
Sbjct: 452 YLAE 455


>gi|13542219|ref|NP_111907.1| glycyl-tRNA synthetase [Thermoplasma volcanium GSS1]
 gi|14325653|dbj|BAB60556.1| tRNA synthetase Gly [Thermoplasma volcanium GSS1]
          Length = 476

 Score = 79.8 bits (195), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 71/474 (14%), Positives = 142/474 (29%), Gaps = 80/474 (16%)

Query: 241 SEKRDHRKLAREMDLFHIAED----GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEIN 295
               D  +LA+    F  +       SG   +   G  +   +IS  ++   K+    ++
Sbjct: 1   MSFEDVVELAKRRGFFWPSFSIYGGSSGFYDYGPLGTLLKDNIISIWKKSYAKEGAIFLD 60

Query: 296 TPQVLDQHLWQQSGHWDSYRA-------------------------------------NM 318
           TP +    +++ SGH + +                                         
Sbjct: 61  TPVIAPADVFKASGHLEKFSDIAVKCEKCKTAYKLENLLKSVGIDVPLNNVEKANAVLEE 120

Query: 319 FAVKCADDTIK-------------DLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAE 364
           + VKC                         L+P    G    F +    S   +P+ + +
Sbjct: 121 YDVKCPKCGAPLRGAYEFNLMFKVGTNELYLRPETAQGIFINFKNLYNYSRNTMPIIVCQ 180

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
            G  +RNE S     L+R+R FTQ +  VF   +  FN      +L   + ++ G E  +
Sbjct: 181 VGKGFRNEISPR-QALIRMREFTQAEVEVFYLNDSDFNPNGN--SLKFKLLRNTGEEVTV 237

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP-KFEYIL 483
                     V +  +    E     +L +I  +            E A Y    +++  
Sbjct: 238 DLKEALHSGIVKNPVMAYFLEKTY-SILSSIGFNPNHLRAREHDPLERAHYSSETWDFEY 296

Query: 484 KDAIGRDWQCGTIQ----VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
               G   +   +      D     +F+   +         V      +G     + I+ 
Sbjct: 297 L-MDGEWIEIVGVSDRGTYDLGRHQQFSGENMEVDGNIPRVVE---PSYGIDRIVLTILN 352

Query: 540 ENFK--------GNLPLWLSPIQAIVTTIT--SSAVEYAQEIANLLKSHHLSIETDFRNE 589
           + +           L   +SP+   V  +         A+E+ N +K     +  D    
Sbjct: 353 DGYYIRDNGYKVLKLDPAVSPLHFAVFPLQRRDGLDAKAKELFNKIKQIDPFVYYDEGGN 412

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            I  +         P  I    +   + ++ IR   ST   + ++ + +  ++ 
Sbjct: 413 -IGRRYARQDEIGTPFCITVDYETLEDSTVTIRERDSTKQVRENIEELLQKISD 465


>gi|308176710|ref|YP_003916116.1| glycine--tRNA ligase [Arthrobacter arilaitensis Re117]
 gi|307744173|emb|CBT75145.1| glycine--tRNA ligase [Arthrobacter arilaitensis Re117]
          Length = 461

 Score = 79.4 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 54/328 (16%), Positives = 112/328 (34%), Gaps = 51/328 (15%)

Query: 336 LKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           ++P    G    F + L  S ++ P  + + G  +RNE +   + + R R F Q +   F
Sbjct: 160 MRPETAQGIFVNFANVLTASRKKPPFGIGQIGKAFRNEITPG-NFIFRTREFEQMEIEFF 218

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDT 454
              E       +      + + D G ++  ++    PE                    D 
Sbjct: 219 TAPEDAPAFFDQWVKDCWAWFLDLGIKEENLRQFDVPE--------------------DE 258

Query: 455 IKNSSQDRINTGVLLG-EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS 513
             + S   I+     G +G+ +G      L     R     +     +      +++  +
Sbjct: 259 RAHYSAGTIDFEYRFGFQGSEWG-----ELMGVANRTDYDLSSHAKASGAE--LSYFNQA 311

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIM----IENFKGN------------LPLWLSPIQAIV 557
             E+  P +I    FG     +  +     E+   N            +   L+P++A V
Sbjct: 312 TGERYTPYVIE-PSFGLTRSMMAFLVDAYTEDEAPNTKGGVDKRTVLKMDPRLAPVKAAV 370

Query: 558 TTIT--SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEAS 615
             ++   +    A+++A  L+    +I+ D     I  + R       P  I        
Sbjct: 371 LPLSRNENLSPKAKDLAAELRKR-WNIDFDDAGA-IGRRYRRQDEIGTPFCITVDFDTLD 428

Query: 616 ERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           ++++ IR   +   ++VSL      L++
Sbjct: 429 DQAVTIRERDTMAQERVSLDQVTAYLSE 456


>gi|47226855|emb|CAG06697.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 331

 Score = 79.4 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 45/251 (17%), Positives = 86/251 (34%), Gaps = 25/251 (9%)

Query: 11  DGSIKNFPVH-ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPEDPR 68
           DG++       +T    A  ++      +V   ++G+   L  P+    S+ ++T +D  
Sbjct: 58  DGTLLIMNKGMSTPLSCARHLTEYHVTNSVLALVDGEPWPLHRPLTHSCSLTLLTFKDSD 117

Query: 69  S---LAVIRHSCAHIMAEAVQSIWPEVQVA------IGPIIEDGFYYDFDKE-----QPF 114
                     SCA ++ + +++ + +            P+    F  D   +        
Sbjct: 118 PTVVNEAYWRSCAALLGQILETAFKDDFNVDLLSTLEVPVTSGAFCCDVVLDPKLDSWTP 177

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPA---KENV 171
           S + L  + K  Q++I +D  +    +    A E+        K E +E   A   K  V
Sbjct: 178 SEESLRSLTKGAQQLIHKDLAWEPLEVGPSVALEV--FSHSRCKQEEVEQKAAQNPKGRV 235

Query: 172 TLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQEL 231
            LYR  +   L  GP V  TG         +V   +  G     +  R  G +   Q + 
Sbjct: 236 MLYRCCDHVLLSGGPLVARTG----LCLQYEVTALHSLGRGPWGLHRRAQGLSLPLQLQA 291

Query: 232 TQYLYFLEESE 242
              ++      
Sbjct: 292 HHTVWRKLRQR 302


>gi|242373870|ref|ZP_04819444.1| glycyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
 gi|242348424|gb|EES40026.1| glycyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
          Length = 463

 Score = 79.4 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 54/344 (15%), Positives = 106/344 (30%), Gaps = 51/344 (14%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    + +  +S  ++LP  + + G  +RNE +
Sbjct: 151 FNLMFKTFQGVTEDSTNELFLRPETAQGIFVNYKNVQRSMRKKLPFGIGQIGKSFRNEIT 210

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
              + + R R F Q +   FC    E  +    K          +   E + ++     E
Sbjct: 211 PG-NFIFRTREFEQMELEFFCKPGEEIEWQNFWKTFASQWLKDLNINEENMRLRDHDEDE 269

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
               S+A  D                    I      G G  +G      +      D Q
Sbjct: 270 LSHYSNATTD--------------------IEYRFPFGWGELWG------IASRTDFDLQ 303

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK--------- 543
             +     +       ++    +EK  P  I     G+    +  + + ++         
Sbjct: 304 KHSEHSGEDFK-----YHDPETNEKYVPYCIE-PSLGADRVTLAFLCDAYEEEGVEGSKD 357

Query: 544 ----GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
                +    L+P +A V  ++      A +I   L S + SI+ D   ++I  + R   
Sbjct: 358 ARTVMHFHPALAPYKAAVLPLSKKLSSEAIKIFEQL-SQNFSIDFDES-QSIGKRYRRQD 415

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
               P  I        +  + +R   S    ++ + +    L +
Sbjct: 416 EIGTPYCITFDFDSLEDNQVTVRDRDSMEQVRMPISELETFLAE 459


>gi|119963161|ref|YP_947256.1| glycyl-tRNA synthetase [Arthrobacter aurescens TC1]
 gi|119950020|gb|ABM08931.1| glycyl-tRNA synthetase [Arthrobacter aurescens TC1]
          Length = 461

 Score = 79.4 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 66/443 (14%), Positives = 134/443 (30%), Gaps = 105/443 (23%)

Query: 270 RKGWKIFQTLISYMRRKIKDDYEEIN---TPQVLDQHLWQQSGHWD-------------- 312
             G ++ + +     + +    E++    +  +L + +W+ SGH +              
Sbjct: 38  PLGAELKENIKRQWWQSMVRGREDVVGLDSSVILPRQVWEASGHVEVFSDPLVECLSCHK 97

Query: 313 SYRANMFAVKCADDTIK---------------------------------------DLRT 333
            YRA+    +  +   +                                       D   
Sbjct: 98  RYRADHLEEEYEEKKGRPPENGLKDIACANCGTRGAWTEPQEFSGLLKTFLGPVANDEGM 157

Query: 334 FALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
             L+P    G    FN+ L  S ++ P  + + G  +RNE +   + + R R F Q +  
Sbjct: 158 HYLRPETAQGIFVNFNNVLTTSRKKPPFGIGQIGKSFRNEITPG-NFIFRTREFEQMEME 216

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
            F                 +S Y D G  +  ++    P          +   +  KG  
Sbjct: 217 FFVEPGTDEEWHQYWMKERMSWYTDLGIREDNLRFFEHPL---------EKLSHYSKGTT 267

Query: 453 DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
           D            G L G       + ++ L           +             ++  
Sbjct: 268 DIEYRFGFQGSEWGELEGIAN----RTDFDLSTHAKASGTDLS-------------YFNQ 310

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGN------------LPLWLSPIQAI 556
           + +E+  P +I     G    F+  +I    E+   N            L   L+P++A 
Sbjct: 311 ATNERYTPFVIE-PAAGLTRSFMAFLIDAYTEDEAPNAKGGVDVRTVLKLDPRLAPVKAA 369

Query: 557 VTTIT--SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
           V  ++        A+ +   L+ +  +I+ D     I  + R       P  I       
Sbjct: 370 VLPLSRNEDLSPKAKALGAQLRKN-WNIDFDDAGA-IGRRYRRQDEIGTPFCITVDFDTL 427

Query: 615 SERSIGIRRFGSTTTQKVSLLDA 637
            ++++ IR   + + ++VSL   
Sbjct: 428 EDQAVTIRERDTMSQERVSLDKV 450


>gi|319892622|ref|YP_004149497.1| Glycyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03]
 gi|317162318|gb|ADV05861.1| Glycyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03]
          Length = 464

 Score = 79.4 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 48/344 (13%), Positives = 100/344 (29%), Gaps = 51/344 (14%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    + +  +S  ++LP  + + G  +RNE +
Sbjct: 152 FNLMFKTFQGVTEDSTNEIFLRPETAQGIFVNYKNVQRSMRKKLPFGIGQIGKSFRNEIT 211

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
              + + R R F Q +   FC    E  +    K              E   ++     E
Sbjct: 212 PG-NFIFRTREFEQMELEFFCKPGTEIEWQNYWKDFAANWLESLGLAKENTRLRDHDEDE 270

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
               S+A  D                    I      G G  +G       +        
Sbjct: 271 LSHYSNATTD--------------------IEYRFPFGWGELWG----IASRTDFDLKKH 306

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK--------- 543
                 DF       +++    +EK  P  I     G+    +  + + +          
Sbjct: 307 SEHSGEDF-------SYHDPETNEKYIPYCIE-PSLGADRVTLAFLCDAYDEEGVEGSKD 358

Query: 544 ----GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
                +    ++P +A V  ++      A ++   L      ++ D   ++I  + R   
Sbjct: 359 ARTVLHFHPAIAPYKAAVLPLSKKLSADAIKVYEQLSE-DFVVDFDES-QSIGKRYRRQD 416

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
               P  I        ++ + +R   +    ++ + +    L +
Sbjct: 417 EIGTPYCITFDFDSLEDQQVTVRDRDTMEQVRMPISELNAFLAE 460


>gi|329956027|ref|ZP_08296798.1| glycine--tRNA ligase [Bacteroides clarus YIT 12056]
 gi|328524786|gb|EGF51840.1| glycine--tRNA ligase [Bacteroides clarus YIT 12056]
          Length = 513

 Score = 79.4 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 56/345 (16%), Positives = 114/345 (33%), Gaps = 54/345 (15%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T +      L+P    G    + +  K+   ++P  +A+ G  +RNE  
Sbjct: 194 FNLMFTTEMGSTSEGAMKIYLRPETAQGIFVNYLNVQKTGRMKIPFGIAQIGKAFRNEIV 253

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
            +   + R+R F Q +   F     E  + +  K   L       FG +        +  
Sbjct: 254 -ARQFIFRMREFEQMEMQFFVKPGTELDWFKTWKATRLKWHKALGFGDDHYRYHDHDKLA 312

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
                    + A +I            +  +  G    EG      F+            
Sbjct: 313 HYA------NAATDI------------EFLMPFGFKEVEGIHSRTNFD------------ 342

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM--------IENFKG 544
              +        +   ++    +E   P +I  ++ G    F+ IM        +EN + 
Sbjct: 343 ---LSQHEKFSGKNIKYFDPETNESYTPYVIETSI-GVDRMFLSIMSASYCEEQLENGET 398

Query: 545 ----NLPLWLSPIQAIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
                LP  L+P++  V  +       E A+EI + LK  H   + D ++ +I  + R  
Sbjct: 399 RVVLKLPAALAPVKLAVMPLVKKDGLPEKAREIIDNLK-FHFHCQYDEKD-SIGKRYRRQ 456

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
                P  +    +   +  + +R   +   ++V++ +   I+  
Sbjct: 457 DAIGTPYCVTVDHQTLEDNCVTLRNRDTMQQERVAISELNNIIAD 501


>gi|158320290|ref|YP_001512797.1| glycyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
 gi|254781873|sp|A8MG73|SYG_ALKOO RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|158140489|gb|ABW18801.1| glycyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
          Length = 462

 Score = 79.4 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 57/391 (14%), Positives = 121/391 (30%), Gaps = 59/391 (15%)

Query: 277 QTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYR---------ANMFAVKCADDT 327
           + +  YM  + ++   +  + Q +  ++ ++                  N+        T
Sbjct: 103 KLIEDYMHSQNEETVVDGWSNQQMKTYIEEKEIVCPECGAKDFTDIRQFNLMFKTFQGVT 162

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
                   L+P    G    F + L+ S +++P  + + G  +RNE +   +   R R F
Sbjct: 163 EDSSTEIFLRPETAQGIFVNFKNVLRTSRKKVPFGIGQIGKSFRNEITPG-NFTFRTREF 221

Query: 387 TQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
            Q +   FC    +  +    K       +  +   E + ++     E    S A  D  
Sbjct: 222 EQMELEFFCKPGEDLEWFNYWKEFCKNWLLNLNLTEENLRIRDHAEEELSHYSKATTDF- 280

Query: 445 ENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPS 504
                      +         GV          + ++ LK            Q   +   
Sbjct: 281 ---------EYRFPFGWGELWGVAD--------RTDFDLK------------QHSEHSGE 311

Query: 505 RFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP------------LWLSP 552
            F      + +EK  P  I     G     +  +++ +   +               L+P
Sbjct: 312 DFTYQDPIT-NEKYVPYCIE-PSVGVDRVALAFLVDAYDEEVIDEKDTRVVLRLHPALAP 369

Query: 553 IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
            +A V  +T    + A E+   L  +   ++ D    +I  + R H     P  I     
Sbjct: 370 FKAAVLPLTKKLKDQALELYETLSEN-YMVDYDEAG-SIGKRYRRHDEIGTPFCITFDYD 427

Query: 613 EASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              ++ + IR   S   +++ + +    L +
Sbjct: 428 SLEDQCVTIRHRDSMEQERIQISELTTYLNE 458


>gi|223996893|ref|XP_002288120.1| glycyl tRNA synthetase [Thalassiosira pseudonana CCMP1335]
 gi|220977236|gb|EED95563.1| glycyl tRNA synthetase [Thalassiosira pseudonana CCMP1335]
          Length = 462

 Score = 79.4 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 52/340 (15%), Positives = 106/340 (31%), Gaps = 77/340 (22%)

Query: 335 ALKPMNCPGHVAVFNHGL-KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
            L+P    G    + + L  S  +LP  +A+ G  +RNE +   + + R R F Q +   
Sbjct: 164 YLRPETAQGIFINYKNVLGTSRSKLPFGIAQIGKAFRNEITPR-NFIFRSREFEQMEIEY 222

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
           F                        G E                    +D+E+ +K V  
Sbjct: 223 FIPP---------------------GDEAWKPFHKQWI----------EDSESFLKSV-- 249

Query: 454 TIKNSSQDRINTGVLLGEG-AFYG-PKFEYILKDAIGRDWQCGTIQVDFNLPSR--FNAF 509
                 ++ +   V  G+G A Y     +   K   G       +Q    + +R  F+  
Sbjct: 250 ---GLKEELMGYDVHEGDGLAHYARACTDITFKFPFG-------VQELMGIAARGDFDLK 299

Query: 510 YVNS---------HSEKCHPVMIH--RAVFGSIERFIGIMIENFKGNLP----------- 547
                          E     + H      G     + ++   +  +             
Sbjct: 300 SHTEGSGKVLDYFDEETKEKFIPHVIEPSLGVDRLILALICSAYAEDEINGEKRNYLSFH 359

Query: 548 LWLSPIQAIVTT---ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             ++P++  V          V+ A+E+   L+    + + D     I  + R      +P
Sbjct: 360 PSIAPVKVSVLPLVKNKEPLVKAARELFEKLQRR-WNCQWDQTGA-IGRRYRRADEIGVP 417

Query: 605 IIIICGDKEASE-RSIGIRRFGSTTTQKVSLLDAIPILTK 643
             +    +   +  ++ +R   ST   ++ + + +P L+K
Sbjct: 418 FCVTVDFETIEDDGAVTVRDRDSTEQVRIPMDEVVPYLSK 457


>gi|154496166|ref|ZP_02034862.1| hypothetical protein BACCAP_00450 [Bacteroides capillosus ATCC
           29799]
 gi|150274721|gb|EDN01785.1| hypothetical protein BACCAP_00450 [Bacteroides capillosus ATCC
           29799]
          Length = 472

 Score = 79.4 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 48/360 (13%), Positives = 112/360 (31%), Gaps = 58/360 (16%)

Query: 307 QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEF 365
           +S   D  + N+        T        L+P    G    F +  ++  ++LP  + + 
Sbjct: 144 KSDFTDIRKFNLMFKTHQGVTEDSSTEVYLRPETAQGIFVNFQNIQRTTRKKLPFGVCQV 203

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKI 423
           G  +RNE +   + + R+R F Q +   FC    +  +    + +        +   +  
Sbjct: 204 GKSFRNEITPG-NFIFRIREFEQMELEFFCQPGTDLEWFAYWRQYCH--DWLTNLNIKDE 260

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            ++L     + +   A +  A                     GV   +   Y  K     
Sbjct: 261 NLRLRDHEPEEL---AFYSKATTDF-----EFMFPFGWGELWGV--ADRTDYDLK---QH 307

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           ++  G+D                  ++    +E   P +I     G+    +  ++E + 
Sbjct: 308 QEHSGKDMT----------------YFDQEKNEHYVPYVIE-PSLGADRVTLAFLVEAYD 350

Query: 544 --------------GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE 589
                               L+P +  V  ++      AQE+   L  +   ++ D    
Sbjct: 351 EEVVDAEKNDVRTVMRFHPALAPFKCAVLPLSKKLGPAAQEVYAELSKY-FMVDYDEAG- 408

Query: 590 TINYKIREHSIKKIPIII-----ICGDKEA-SERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +I  + R       P+ +       GD+   ++  + +R   +    ++ +      + +
Sbjct: 409 SIGKRYRRQDEIGTPLCVTVDFQTVGDENTPADHCVTVRDRDTMEQVRLPIDQLKAYIEE 468


>gi|323358281|ref|YP_004224677.1| glycyl-tRNA synthetase (class II) [Microbacterium testaceum
           StLB037]
 gi|323274652|dbj|BAJ74797.1| glycyl-tRNA synthetase (class II) [Microbacterium testaceum
           StLB037]
          Length = 462

 Score = 79.4 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 54/310 (17%), Positives = 109/310 (35%), Gaps = 26/310 (8%)

Query: 334 FALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
           + L+P    G    F++ L  S R+ P  + + G  +RNE +   + + R R F Q +  
Sbjct: 158 YFLRPETAQGIFVNFSNVLTASRRKPPFGVGQVGKAFRNEITPG-NFIFRTREFEQMEIE 216

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKL-----STRPEKRVGSDALWDDAENI 447
            F    +             + + D G +   +K        R     G+  +       
Sbjct: 217 YFTPPAEANEWFEHWVEACWNWFIDLGIDPENMKRFDVPEDDRAHYSAGTIDVEYRFGFP 276

Query: 448 MKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFN 507
            K   + +  +  +R +  +     A  G    +  + A G  +    I+  F L     
Sbjct: 277 GKEWGELMGVA--NRTDYDLKSHSEAS-GQSLTFFDQ-ASGEKYTPYVIEPSFGLTRAMM 332

Query: 508 AFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT--SSAV 565
           AF V+S+ E+  P        G+  R +          L   L+P++  V  ++      
Sbjct: 333 AFLVDSYREEEVPNAKG----GTDTRTV--------LKLDPRLAPVKVAVLPLSRNERLS 380

Query: 566 EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
             A+E A+ L++   +I+ D     I  + R       P  +        + ++ +R   
Sbjct: 381 PLARETADTLRAAGWNIDFDDAGA-IGRRYRRQDEIGTPFCVTVDFDSLDDNAVTVRDRD 439

Query: 626 STTTQKVSLL 635
           +   +++ L 
Sbjct: 440 TMGQERIGLD 449


>gi|301312443|ref|ZP_07218359.1| glycine--tRNA ligase [Bacteroides sp. 20_3]
 gi|300829626|gb|EFK60280.1| glycine--tRNA ligase [Bacteroides sp. 20_3]
          Length = 514

 Score = 79.4 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 56/331 (16%), Positives = 106/331 (32%), Gaps = 26/331 (7%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    F +  K+   ++P  +A+ G  +RNE  
Sbjct: 194 FNLMFSTDMGSTADGATKIYLRPETAQGIFVNFLNVQKTGRMKIPFGIAQIGKAFRNEIV 253

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
            +   + R+R F Q +   F    +      K  +  +  ++  G      +     +  
Sbjct: 254 -ARQFIFRMREFEQMEMQFFVRPGEEIEWFKKWKSTRLKWHQALGLGDQKYRYHDHEKLA 312

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
             ++A  D                 +  +  G    EG      F+     +    +   
Sbjct: 313 HYANAAMDI----------------EFEMPFGFKEVEGIHSRTNFDL----SQHEKFSGK 352

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQ 554
            IQ      ++    YV   S     V +        E  +          LP  L+PI+
Sbjct: 353 KIQYFDPELNQSYTPYVIETSIGVDRVFLSIMAGSYCEETLANGESRVVLKLPAALAPIK 412

Query: 555 AIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
             V  +       E A+EI N+L+      + D ++ +I  + R       P  I     
Sbjct: 413 LAVLPLVKKDGLPEKAEEIINMLR-FDFRCQYDEKD-SIGKRYRRQDAIGTPYCITVDHD 470

Query: 613 EASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              +  + IR   +   ++VS+     I+T+
Sbjct: 471 TLKDNCVTIRFRDTMEQERVSIDKLHDIITE 501


>gi|296454481|ref|YP_003661624.1| glycyl-tRNA synthetase [Bifidobacterium longum subsp. longum
           JDM301]
 gi|296183912|gb|ADH00794.1| glycyl-tRNA synthetase [Bifidobacterium longum subsp. longum
           JDM301]
          Length = 490

 Score = 79.4 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 57/379 (15%), Positives = 114/379 (30%), Gaps = 48/379 (12%)

Query: 278 TLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALK 337
            L      K  D   E     ++  +   +    +    NM           +     L+
Sbjct: 102 KLEESYAEKHGDKMPENGMKDIVCPNCGTRGQWTEPRDFNMMLRTHLGPVEDENSLHYLR 161

Query: 338 PMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT 396
           P    G    F +    S  + P  +A  G  +RNE +   + + R R F Q +   F T
Sbjct: 162 PETAQGIFVDFKNVMTSSRSKPPFGIANMGKSFRNEITPG-NFIFRTREFEQMEMEFFVT 220

Query: 397 KEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIK 456
                       +     Y D G +   ++    P+         +   +  K  +D   
Sbjct: 221 PGTDEEWHQYWIDARTRWYIDLGVKPENLRHYEHPK---------EKLSHYSKRTVDIEY 271

Query: 457 NSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE 516
                  + G L G            + +    D    +     +L      ++  +  E
Sbjct: 272 KFGFQGSDWGELEG------------IANRTDFDLSAHSKHSGEDLS-----YFNQATGE 314

Query: 517 KCHPVMIHRAVFGSIERFIGIMIENFK----------------GNLPLWLSPIQAIVTTI 560
           K  P +I     G     +  +++ +                   L   L+P++A V  +
Sbjct: 315 KYVPYVIE-PAAGLTRSLMCFLVDAYDVDEAPNTKGGVDKRTVLRLDPRLAPVKAAVLPL 373

Query: 561 TSSAV--EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERS 618
           +        AQ +A+ L+ +   I+ D     I  + R       P+ I        + +
Sbjct: 374 SKKPELQTVAQNLADDLRFNEWMIDYDESGA-IGRRYRRQDEIGTPLCITVDFDTLEDHA 432

Query: 619 IGIRRFGSTTTQKVSLLDA 637
           + IR   +   ++++L   
Sbjct: 433 VTIRERDTMAQERIALDKV 451


>gi|116328846|ref|YP_798566.1| glycyl-tRNA synthetase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116331755|ref|YP_801473.1| glycyl-tRNA synthetase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|122280506|sp|Q04QV5|SYG_LEPBJ RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|122283369|sp|Q04Z62|SYG_LEPBL RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|116121590|gb|ABJ79633.1| Glycine--tRNA ligase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116125444|gb|ABJ76715.1| Glycine--tRNA ligase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 464

 Score = 79.4 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 52/383 (13%), Positives = 119/383 (31%), Gaps = 65/383 (16%)

Query: 281 SYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADD----------TIKD 330
            ++  +  + +    T + ++Q + + +    +        +  D           + +D
Sbjct: 107 KFLEDQKGEGFATGLTLEKMNQVIKENNFSCPNCGQRGTFTEARDFNLMFKTSHGASAED 166

Query: 331 LRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
                L+P    G    F + + +  R++P  +A+ G  +RNE   +   + R R F Q 
Sbjct: 167 SLDIYLRPETAQGIFLNFKNVVSTTRRKIPFGIAQIGKSFRNEI-MARQFVFRTREFEQM 225

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIY-KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIM 448
           +   FC             N  ++   +  G +K  +++    ++ +             
Sbjct: 226 EMEFFCEPGTQKEWFSHWVNYCMNWLTEQVGVKKENLRIREHEKEEL------------- 272

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF-- 506
                +  +     I      G G  +G                      D N   +F  
Sbjct: 273 -----SFYSEGTSDIEFKYNFGWGELWG---------------IASRTDYDLNQHQKFSG 312

Query: 507 -NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK------------GNLPLWLSPI 553
            +  Y +    K +   +     G    F+ ++ + ++                  ++P+
Sbjct: 313 EDLKYQDQVQNKKYVPFVVEPALGVNRLFLAVVTDAYQEEKLPDGEIRTVLRFSPKIAPV 372

Query: 554 QAIV--TTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
           +  V         +E ++EI   L     +IE D     I  + R       P  I    
Sbjct: 373 KVAVFPLMKKDGLLEKSREIFADLSKLG-NIEYDDSGA-IGKRYRRQDEIGTPFCITVDY 430

Query: 612 KEASERSIGIRRFGSTTTQKVSL 634
               + ++ +R   S   ++VS+
Sbjct: 431 DTLKDDTVTVRERDSMAQERVSV 453


>gi|256838464|ref|ZP_05543974.1| glycyl-tRNA synthetase [Parabacteroides sp. D13]
 gi|256739383|gb|EEU52707.1| glycyl-tRNA synthetase [Parabacteroides sp. D13]
          Length = 514

 Score = 79.4 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 56/331 (16%), Positives = 106/331 (32%), Gaps = 26/331 (7%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    F +  K+   ++P  +A+ G  +RNE  
Sbjct: 194 FNLMFSTDMGSTADGATKIYLRPETAQGIFVNFLNVQKTGRMKIPFGIAQIGKAFRNEIV 253

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
            +   + R+R F Q +   F    +      K  +  +  ++  G      +     +  
Sbjct: 254 -ARQFIFRMREFEQMEMQFFVRPGEEIEWFKKWKSTRLKWHQALGLGDEKYRYHDHEKLA 312

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
             ++A  D                 +  +  G    EG      F+     +    +   
Sbjct: 313 HYANAATDI----------------EFEMPFGFKEVEGIHSRTNFDL----SQHEKFSGK 352

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQ 554
            IQ      ++    YV   S     V +        E  +          LP  L+PI+
Sbjct: 353 KIQYFDPELNQSYTPYVIETSIGVDRVFLSIMAGSYCEETLANGESRVVLKLPAALAPIK 412

Query: 555 AIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
             V  +       E A+EI N+L+      + D ++ +I  + R       P  I     
Sbjct: 413 LAVLPLVKKDGLPEKAEEIINMLR-FDFRCQYDEKD-SIGKRYRRQDAIGTPYCITVDHD 470

Query: 613 EASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              +  + IR   +   ++VS+     I+T+
Sbjct: 471 TLKDNCVTIRFRDTMEQERVSIDKLHDIITE 501


>gi|313837260|gb|EFS74974.1| glycyl-tRNA synthetase [Propionibacterium acnes HL037PA2]
 gi|314972031|gb|EFT16129.1| glycyl-tRNA synthetase [Propionibacterium acnes HL037PA3]
          Length = 472

 Score = 79.4 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 58/362 (16%), Positives = 121/362 (33%), Gaps = 29/362 (8%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           EEIN P   ++  W +         NM           +     L+P    G    F + 
Sbjct: 132 EEINCPNCGNKGQWTEPR-----DFNMMLKTYLGPVEDEAGLHYLRPETAQGIFVNFQNV 186

Query: 352 LKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
           L S  ++ P  +A+ G  +RNE +   + + R R F Q +   F              + 
Sbjct: 187 LTSARKKPPFGIAQTGKSFRNEITPG-NFIFRTREFEQMEMEFFVEPGTDEEWHQYWIDE 245

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
             + Y D G     ++    P+         +   +  K  +D          + G L G
Sbjct: 246 RTNWYTDLGINADNLRHYEHPK---------EKLSHYSKRTVDIEYKFGFAGSDWGELEG 296

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
                  + ++ L        +  +   D     R+  + +   +     +M       +
Sbjct: 297 IAN----RTDFDLGTHTKHSGKDLS-YFDQAQNKRYLPYVIEPAAGLTRSLMAFMVDAYT 351

Query: 531 IERFI---GIMIENFKGNLPLWLSPIQAIVTTIT--SSAVEYAQEIANLLKSHHLSIETD 585
            +      G + +     L   L+P++A V  ++  S     A+++A  L+    +++ D
Sbjct: 352 EDEAPNAKGGVDKRTVLKLDPRLAPVKAAVLPLSRNSDLSPKARDLAAQLR-QWWNVDFD 410

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
              + I  + R       P  +        + ++ +R   + + ++++L      L  E 
Sbjct: 411 D-AQAIGKRYRRQDEIGTPFCVTVDFDTLDDNAVTVRDRDTMSQERIALDKVEDYLA-ER 468

Query: 646 LP 647
           LP
Sbjct: 469 LP 470


>gi|189462867|ref|ZP_03011652.1| hypothetical protein BACCOP_03567 [Bacteroides coprocola DSM 17136]
 gi|189430483|gb|EDU99467.1| hypothetical protein BACCOP_03567 [Bacteroides coprocola DSM 17136]
          Length = 514

 Score = 79.4 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 56/343 (16%), Positives = 112/343 (32%), Gaps = 50/343 (14%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    + +  K+   ++P  +A+ G  +RNE  
Sbjct: 195 FNLMFSTEMGSTADGAMKVYLRPETAQGIFVNYLNVQKTGRMKVPFGIAQIGKAFRNEIV 254

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
            +   + R+R F Q +   F           K     +  +K  GF     +     +  
Sbjct: 255 -ARQFIFRMREFEQMEMQFFVKPGTELEWFQKWKETRLKWHKALGFGDDHYRYHDHEKLA 313

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
             ++A  D                 +  +  G    EG      F+              
Sbjct: 314 HYANAATDI----------------EFLMPFGFKEVEGIHSRTNFD-------------- 343

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM--------IENFKG-- 544
            +        +   ++    +E   P +I  ++ G    F+ IM        +EN +   
Sbjct: 344 -LSQHEKYSGKSIKYFDPEINESYTPYVIETSI-GVDRMFLSIMSAAYHEETLENGETRV 401

Query: 545 --NLPLWLSPIQAIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              LP  L+P++  +  +       E A+EI + LK  H   + D ++ +I  + R    
Sbjct: 402 VLKLPAALAPVKLAIMPLVKKDGLPEKAREIMDDLK-FHFHCQYDEKD-SIGKRYRRQDA 459

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              P  I    +   +  + +R   +   ++V++ D   I+  
Sbjct: 460 IGTPYCITIDHQTLEDNCVTLRNRDTMEQERVAIADLNSIIAD 502


>gi|241889715|ref|ZP_04777013.1| glycyl-tRNA synthetase [Gemella haemolysans ATCC 10379]
 gi|241863337|gb|EER67721.1| glycyl-tRNA synthetase [Gemella haemolysans ATCC 10379]
          Length = 457

 Score = 79.4 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 50/329 (15%), Positives = 108/329 (32%), Gaps = 22/329 (6%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+                 L+P    G    F +  +S  ++LP  + + G  +RNE +
Sbjct: 146 FNLMFKTNQGVVENSTSQIYLRPETAQGIFVNFKNVQRSMRKKLPFGIGQIGKSFRNEIT 205

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              + + R R F Q +   FC      +      N       D G  K  ++L    ++ 
Sbjct: 206 PG-NFIFRTREFEQMELEFFCEPGTELDWHTTWKNNCEKFLLDLGMTKENIRLRDHDKEE 264

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           +   + + +A   +       K         G+          + +Y LK  +    Q  
Sbjct: 265 L---SHYSNATTDI-----EFKFPFGWGELWGIAS--------RTDYDLKQHMEHSGQDL 308

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQ 554
           T Q D +   +F  + +   S     V++        E  +G             L+P +
Sbjct: 309 TYQ-DLSTNEKFIPYCI-EPSVGVDRVLLAFLCDAYNEEEVGENDTRTVLKFHPALAPYK 366

Query: 555 AIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
           A +  ++    + A E+   L +    ++ D    +I  + R       P  I    +  
Sbjct: 367 AAILPLSKKLSDKAVEVYQQL-AVDFMVDFDETG-SIGKRYRRQDEVGTPFCITYDFESE 424

Query: 615 SERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           ++  + +R   +    ++ + +    + +
Sbjct: 425 NDGMVTVRDRDTMEQTRIPITELKQYIEE 453


>gi|329769632|ref|ZP_08261036.1| glycyl-tRNA synthetase [Gemella sanguinis M325]
 gi|328838387|gb|EGF87996.1| glycyl-tRNA synthetase [Gemella sanguinis M325]
          Length = 457

 Score = 79.1 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 48/331 (14%), Positives = 110/331 (33%), Gaps = 22/331 (6%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+                 L+P    G    F +  +S  ++LP  + + G  +RNE +
Sbjct: 146 FNLMFKTNQGVVENSTSVVYLRPETAQGIFVNFKNVQRSMRKKLPFGIGQIGKSFRNEIT 205

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              + + R R F Q +   FC             +   +   + G  K  ++L    ++ 
Sbjct: 206 PG-NFIFRTREFEQMELEFFCEPGTELEWHKIWKDNCENWLLNLGMTKENIRLRDHEKEE 264

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           +   + + +A   +       +         G+          + +Y LK  +    Q  
Sbjct: 265 L---SHYSNATTDI-----EFRFPFGWGELWGIAS--------RTDYDLKQHMQHSGQDL 308

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQ 554
           T Q +     +F  + +   S     V++        E  +G             ++P +
Sbjct: 309 TYQ-NLQTNEKFIPYCI-EPSVGVDRVLLAFLCDAYNEEEVGEGDTRTVLKFHPAIAPYK 366

Query: 555 AIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
           A +  ++    E A ++   L +    ++ D    +I  + R       P  I    +  
Sbjct: 367 AAILPLSKKLSEQATKVYQEL-AQDFMVDFDETG-SIGKRYRRQDEVGTPFCITYDFESE 424

Query: 615 SERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           ++  + +R   S    ++ + +    LT+++
Sbjct: 425 NDGMVTVRDRDSMEQVRMPISELKQYLTEKT 455


>gi|291533207|emb|CBL06320.1| Prolyl-tRNA synthetase [Megamonas hypermegale ART12/1]
          Length = 253

 Score = 79.1 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 20/145 (13%), Positives = 53/145 (36%), Gaps = 7/145 (4%)

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLS---PIQ 554
           +         A +++ +  K  P+++     G        + +    N  +W +   P +
Sbjct: 98  LGIKYSKALGATFLDENG-KEKPLIMGCYGIGVSRTMAAAIEQFHDDNGIIWPASIAPFE 156

Query: 555 AIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
            ++  I     + ++ A+++   +K+  + +  D R +    K ++  +   P+ I    
Sbjct: 157 VVIVPINAKDEAQMQIAEKLYADMKNVGIDVLLDDRKDRAGVKFKDADLIGYPVRITVSP 216

Query: 612 KEASERSIGIRRFGSTTTQKVSLLD 636
           K      + I+      T  V + D
Sbjct: 217 KLLDANEVEIKVRRDGATSNVKVDD 241


>gi|94985816|ref|YP_605180.1| glycyl-tRNA synthetase [Deinococcus geothermalis DSM 11300]
 gi|122986565|sp|Q1IXM3|SYG_DEIGD RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|94556097|gb|ABF46011.1| glycyl-tRNA synthetase [Deinococcus geothermalis DSM 11300]
          Length = 504

 Score = 79.1 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 57/381 (14%), Positives = 116/381 (30%), Gaps = 41/381 (10%)

Query: 287 IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFAL-KPMNCPGHV 345
                 E+     +      + G W   R      K +   + D  +F   +P    G  
Sbjct: 136 HPAKAAEVLVAAGVRDPFSGEVGDWTEPRPFNMMFKTSIGPVADEDSFGYLRPETAQGIF 195

Query: 346 AVFNHGLKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
             F + + S  R LP  +A+ G  +RNE +   + + RVR   Q +   FCT        
Sbjct: 196 TNFKNVVDSTSRRLPFGIAQIGKAFRNEITPR-NFIFRVRELEQMEIEFFCTPGTDEAWH 254

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
                  ++ ++  G  +  +++   P++     A +      +     T+     + I 
Sbjct: 255 QHWLEARLAWWEAQGIPREKIQILDVPKE---DLAHYSKRTYDLMYNYPTLGYEEIEGIA 311

Query: 465 TGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIH 524
                  G+    + E  +             +V+ N  S       +  + K     + 
Sbjct: 312 NRTDFDLGSHTKAQAELGI-----------QARVEENFDSVAKLTIPHPETNKPVVPFVI 360

Query: 525 RAVFGSIERFIGIMIENFKG------------NLPLWLSPIQAIVTTIT---SSAVEYAQ 569
               G     + ++ E +               L   L+PI+  V  +          A+
Sbjct: 361 EPSAGVDRAMLAVLAEAYTKETLENGSERIVLKLKPHLAPIKVAVIPLARNREEITSVAK 420

Query: 570 EIANLLKSHH-LSIETDFRNETINYKIREHSIKKIPIIIIC-------GDKEASERSIGI 621
            I   L+S     +  +     I    R H     P  +         G+  A   ++ +
Sbjct: 421 AIKAKLQSLGLGRVLYEDSGN-IGKAYRRHDEVGTPYCVTVDFETVGKGEDPALTDTVTV 479

Query: 622 RRFGSTTTQKVSLLDAIPILT 642
           R   +   ++V + +    L 
Sbjct: 480 RDRDTLGQERVRISELANWLQ 500


>gi|150009785|ref|YP_001304528.1| glycyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503]
 gi|149938209|gb|ABR44906.1| glycyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503]
          Length = 514

 Score = 79.1 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 56/331 (16%), Positives = 106/331 (32%), Gaps = 26/331 (7%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    F +  K+   ++P  +A+ G  +RNE  
Sbjct: 194 FNLMFSTDMGSTADGAMKVYLRPETAQGIFVNFLNVQKTGRMKIPFGIAQIGKAFRNEIV 253

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
            +   + R+R F Q +   F    +      K  +  +  ++  G      +     +  
Sbjct: 254 -ARQFIFRMREFEQMEMQFFVRPGEEIEWFKKWKSTRLKWHQALGLGDEKYRYHDHEKLA 312

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
             ++A  D                 +  +  G    EG      F+     +    +   
Sbjct: 313 HYANAATDI----------------EFEMPFGFKEVEGIHSRTNFDL----SQHEKFSGK 352

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQ 554
            IQ      ++    YV   S     V +        E  +          LP  L+PI+
Sbjct: 353 KIQYFDPELNQSYTPYVIETSIGVDRVFLSIMAGSYCEETLANGESRVVLKLPAALAPIK 412

Query: 555 AIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
             V  +       E A+EI N+L+      + D ++ +I  + R       P  I     
Sbjct: 413 LAVLPLVKKDGLPEKAEEIINMLR-FDFRCQYDEKD-SIGKRYRRQDAIGTPYCITVDHD 470

Query: 613 EASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              +  + IR   +   ++VS+     I+T+
Sbjct: 471 TLKDNCVTIRFRDTMEQERVSIDKLHDIITE 501


>gi|157413737|ref|YP_001484603.1| seryl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215]
 gi|166987315|sp|A8G5Y6|SYS_PROM2 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|157388312|gb|ABV51017.1| Seryl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215]
          Length = 425

 Score = 79.1 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 41/249 (16%), Positives = 88/249 (35%), Gaps = 20/249 (8%)

Query: 215 PMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFH----IAEDGSGVIFWHR 270
           P  +   G   N   ++  +   L++   + H ++   +++F          S  +    
Sbjct: 112 PSKNAPIGKDENDNIQVKTWGNPLKDENLKSHWEIGESLNIFDSVKSTKISKSRFVTLIG 171

Query: 271 KGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
            G ++ + LI++M     K+ Y E+  P +++    + SG    +    F     D    
Sbjct: 172 NGARLERALINFMLDMHTKNGYLELMPPALVNSESLKGSGQLPKFSNESFKCSNDD---- 227

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGF 386
                 L P       A   + L   ++LP++   +   +R E         GL+R+  F
Sbjct: 228 ----LWLSPTAEVPLTAFHRNELIDPKQLPIKYVAYSPCFRREAGSYGKDTKGLIRLHQF 283

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP----EKRVGSDALWD 442
            + + + FC   +      KI +   +I+K       +V + T        R     +W 
Sbjct: 284 NKVELYWFCDPTKSLEAHKKITSDAENIFKKLNLPYRIVDICTGDLGFSSSRTFDLEVWL 343

Query: 443 DAENIMKGV 451
            +    + +
Sbjct: 344 PSSKCYREI 352


>gi|238917275|ref|YP_002930792.1| glycyl-tRNA synthetase, class II [Eubacterium eligens ATCC 27750]
 gi|259511934|sp|C4Z1I4|SYG_EUBE2 RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|238872635|gb|ACR72345.1| glycyl-tRNA synthetase, class II [Eubacterium eligens ATCC 27750]
          Length = 462

 Score = 79.1 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 46/335 (13%), Positives = 101/335 (30%), Gaps = 46/335 (13%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPS 374
            N+        T     T  L+P    G    F +  + S +++P  + + G  +RNE +
Sbjct: 151 FNLMFKTFQGVTEDAKNTVYLRPETAQGIFVNFKNVQRTSRKKVPFGIGQIGKSFRNEIT 210

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              +   R R F Q +   FC                I   K  G ++  ++      + 
Sbjct: 211 PG-NFTFRTREFEQMELEFFCKPGTDLEWFTYWRQYCIDWLKALGIKEDEMRARDHSPEE 269

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           +                     +     I      G G  +G   +    D         
Sbjct: 270 L------------------CFYSKGTTDIEFLFPFGWGELWGIA-DRTDYDLT------- 303

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI------ENFKGNLPL 548
             Q         +  Y +  +++ +   +     G+    +  +       E   G++  
Sbjct: 304 --QHQTVSGE--DMSYFDDEAKEKYIPYVIEPSLGADRVTLAFLCSAYDEEELEGGDVRT 359

Query: 549 WL------SPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            L      +P++  +  ++    E A+++   L  +  + E D R   I  + R      
Sbjct: 360 VLHFHPAIAPVKIGILPLSKKLNEGAEKVYAELSKY-YNCEFDDRGN-IGKRYRRQDEIG 417

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
            P  I        + ++ +R   +   +++ + D 
Sbjct: 418 TPFCITYDFDSEEDGAVTVRDRDTMQQERIKIADL 452


>gi|223044387|ref|ZP_03614421.1| glycyl-tRNA synthetase [Staphylococcus capitis SK14]
 gi|222442256|gb|EEE48367.1| glycyl-tRNA synthetase [Staphylococcus capitis SK14]
          Length = 463

 Score = 79.1 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 55/393 (13%), Positives = 118/393 (30%), Gaps = 60/393 (15%)

Query: 277 QTLISYMRRK------IKDDYEEINTPQVLDQH----LWQQSGHWDSYRANMFAVKCADD 326
           + +  YM+++      I D        Q++D          + +W   R      K    
Sbjct: 101 KLIEDYMQKEKGDENFIADGLSFDEMKQIIDDEGIVCPVSGTANWTDIRQFNLMFKTFQG 160

Query: 327 TIKDLR-TFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVR 384
             +D      L+P    G    + +  +S  ++LP  + + G  +RNE +   + + R R
Sbjct: 161 VTEDSTNELFLRPETAQGIFVNYKNVQRSMRKKLPFGIGQIGKSFRNEITPG-NFIFRTR 219

Query: 385 GFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDD 443
            F Q +   FC   E++  +         + +K F  + +          R+      + 
Sbjct: 220 EFEQMELEFFCKPGEEIEWQ---------NFWKTFASQWLKDLNINEENMRLRDHDADEL 270

Query: 444 AENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLP 503
           +           K         G+           F+         +             
Sbjct: 271 SHYSNATTDIEYKFPFGWGELWGIASRTD------FDLQKHSEHSGED------------ 312

Query: 504 SRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK-------------GNLPLWL 550
                ++    +EK  P  I     G+    +  + + ++              +    L
Sbjct: 313 ---FKYHDPETNEKYVPYCIE-PSLGADRVTLAFLCDAYEEEGVEGSKDARTVMHFHPAL 368

Query: 551 SPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           +P +A V  ++      A +I   L     SI+ D   ++I  + R       P  I   
Sbjct: 369 APYKAAVLPLSKKLSSEAIKIFEQLSQS-FSIDFDES-QSIGKRYRRQDEIGTPYCITFD 426

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
                +  + +R   S    ++ + +    L +
Sbjct: 427 FDSLEDNQVTVRDRDSMEQVRMPISELETFLAE 459


>gi|161527575|ref|YP_001581401.1| glycyl-tRNA synthetase [Nitrosopumilus maritimus SCM1]
 gi|160338876|gb|ABX11963.1| glycyl-tRNA synthetase [Nitrosopumilus maritimus SCM1]
          Length = 485

 Score = 79.1 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 59/346 (17%), Positives = 119/346 (34%), Gaps = 28/346 (8%)

Query: 319 FAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR-ELPVRLAEFGSVYRNEPSGSL 377
           F +        +     L+P  C      F    K+ R +LP+ +A+ G  +RNE +   
Sbjct: 142 FNMMFRVGIGPEEEEAYLRPETCQSIFVDFPRLYKTMRGKLPLGIAQVGKSFRNEIAPR- 200

Query: 378 HGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGS 437
             L+R+R F Q +  VFC   ++     +    +         +   V+++ +     G+
Sbjct: 201 QSLLRLREFYQAEIEVFCNPSKLDEV--EKFTEVQDTVIRVQTDSEPVEMTCKEAIESGT 258

Query: 438 DALWDDAENIMKGVLDTIKNSSQDRINT----GVLLGEGAFYG-PKFEYILKDAIG-RDW 491
               +       G+L      +   I+      +   E AFY    F++ ++  IG  + 
Sbjct: 259 VP--NKFVAYYLGILTEFYEKTGIDISKSRFRKLGEKEKAFYAEVAFDFEVETTIGWLEL 316

Query: 492 QCGTIQVDFNL-------PSRFNAFYVNSHSEKCHPVM---IHRAVFGSIERFIGIMIEN 541
                + D++L         +F     +         +   I R+++  +E  +    E+
Sbjct: 317 VACNYRSDYDLSSHANKSKEKFEIMDGDDKVLPHVFEISMGIDRSLYTILEHSLKDDKEH 376

Query: 542 FKGNLP--LWLSPIQAIVT--TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
            +  L    +L+P    +          E   EI   +K        D     I  + R 
Sbjct: 377 ERIVLSLKPYLAPTHVGILSLVKKDGLKEKTDEIYLSIKRK-FDAFLDHSGA-IGRRYRR 434

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
                 P  +    +   + ++ IR+  S    +V + D   IL +
Sbjct: 435 LDEIGAPFAVTVDHQTLEDDTVTIRKRDSMEQSRVKISDMDSILLE 480


>gi|329725453|gb|EGG61936.1| putative glycine--tRNA ligase [Staphylococcus epidermidis VCU144]
          Length = 310

 Score = 79.1 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 50/332 (15%), Positives = 104/332 (31%), Gaps = 49/332 (14%)

Query: 327 TIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRG 385
           T        L+P    G    + +  +S  ++LP  + + G  +RNE +   + + R R 
Sbjct: 9   TEDSTNELFLRPETAQGIFVNYKNVQRSMRKKLPFGIGQIGKSFRNEITPG-NFIFRTRE 67

Query: 386 FTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
           F Q +   FC   E++  +           +K F  E +     +    R+      + +
Sbjct: 68  FEQMELEFFCKPGEEIEWQNY---------WKTFASEWLTDLNISEDNMRLRDHDEDELS 118

Query: 445 ENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPS 504
                      K         G+          + +Y L+            Q   +   
Sbjct: 119 HYSNATTDIEYKFPFGWGELWGIAS--------RTDYDLR------------QHSEHSGE 158

Query: 505 RFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK-------------GNLPLWLS 551
            F  ++    +EK  P  I     G+    +  + + +               +    L+
Sbjct: 159 DFK-YHDPETNEKYIPYCIE-PSLGADRVTLAFLCDAYAEEGVEGSKDARTVMHFHPALA 216

Query: 552 PIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
           P +A V  ++      A +I   L S   +I+ D   ++I  + R       P  I    
Sbjct: 217 PYKAAVLPLSKKLSSEAIKIFEQLSSS-FAIDFDES-QSIGKRYRRQDEIGTPYCITFDF 274

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
               +  + +R   S    ++ + +    L +
Sbjct: 275 DSLEDNQVTVRDRDSMEQVRMPISELETFLAE 306


>gi|296269165|ref|YP_003651797.1| glycyl-tRNA synthetase [Thermobispora bispora DSM 43833]
 gi|296091952|gb|ADG87904.1| glycyl-tRNA synthetase [Thermobispora bispora DSM 43833]
          Length = 461

 Score = 79.1 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 50/315 (15%), Positives = 108/315 (34%), Gaps = 23/315 (7%)

Query: 335 ALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
            L+P    G    F +  +S  +++P  + + G  +RNE +   + + R R F Q +   
Sbjct: 160 YLRPETAQGIFINFLNVQQSARKKIPFGIGQIGKSFRNEITPG-NFIFRTREFEQMEMEF 218

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
           F              +  +  Y D G  K  ++L   P+         +   +  K  +D
Sbjct: 219 FVKPGTDEEWHQYWIDERLRWYIDLGINKDNLRLYEHPK---------EKLSHYSKRTVD 269

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN- 512
                +   +  G L G       + ++ L        Q  +   D     R+  + +  
Sbjct: 270 IEYRFNFPGMEWGELEGIAN----RTDFDLSSHSKASGQDLS-YFDQETGQRYIPYVIEP 324

Query: 513 SHSEKCHPVMIHRAVFGSIERF--IGIMIENFKGNLPLWLSPIQAIVTTITSSAV--EYA 568
           +       +      +   E     G M +     L   L+P++  V  ++ +A     A
Sbjct: 325 AAGVDRTALTFLLDAYTVDEAPNAKGEMEQRTVLRLDPRLAPVKVAVLPLSRNADLSPKA 384

Query: 569 QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
           +++A  L+    ++E D     I  + R       P  +    +   + ++ +R   S  
Sbjct: 385 RDLAAQLRRR-WNVEFDDAGA-IGRRYRRQDEIGTPYAVTIDFQTLEDNAVTVRERDSMA 442

Query: 629 TQKVSLLDAIPILTK 643
            +++S+      L +
Sbjct: 443 QERISIDQVEAYLRE 457


>gi|291520560|emb|CBK75781.1| glycyl-tRNA synthetase, dimeric type [Butyrivibrio fibrisolvens
           16/4]
          Length = 397

 Score = 79.1 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 58/382 (15%), Positives = 115/382 (30%), Gaps = 49/382 (12%)

Query: 278 TLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALK 337
            L   +    K++ +E      +      +    D    N+        T     T  L+
Sbjct: 45  ELKGSVDGWTKEEMKEFIDSHNVPCPTCGKHNFTDIREFNLMFKTFQGVTEDAKNTVYLR 104

Query: 338 PMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT 396
           P    G    F +  + S +++P  + + G  +RNE +   +   R R F Q +   FC 
Sbjct: 105 PETAQGIFVNFKNVQRTSRKKVPFGIGQIGKSFRNEITPG-NFTFRTREFEQMELEFFCK 163

Query: 397 KEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIK 456
                                 G ++  ++L     + +                  +  
Sbjct: 164 PGSQDEWFQYWRGFCRDWLLSLGMKEDEMRLRDHDPEEL------------------SFY 205

Query: 457 NSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE 516
           ++    I      G G  +G         A   D+     Q   N+  +   ++ +  +E
Sbjct: 206 STGTTDIEFLFPFGWGELWGI--------ASRTDYDLTQHQ---NVSGQDLTYFDDETNE 254

Query: 517 KCHPVMIHRAVFGSIERFIGIMI----ENFKGNLP-----------LWLSPIQAIVTTIT 561
           K  P +I     G+    +  +     E   G                L+P++  V  ++
Sbjct: 255 KYLPYVIE-PSLGADRVVLAFLCAAYDEEEVGKDGKSDVRTVLHFHPALAPVKIGVLPLS 313

Query: 562 SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
               E A+++   L     + E D R  TI  + R       P  I        +  + I
Sbjct: 314 KKLNEGAEKVFAELSKK-YNCEFDDRG-TIGKRYRRMDEIGTPFCITYDFDSEEDHMVTI 371

Query: 622 RRFGSTTTQKVSLLDAIPILTK 643
           R   S   +++++ D       
Sbjct: 372 RHRDSMEQERIAIADLDAYFAD 393


>gi|218133229|ref|ZP_03462033.1| hypothetical protein BACPEC_01093 [Bacteroides pectinophilus ATCC
           43243]
 gi|217992102|gb|EEC58106.1| hypothetical protein BACPEC_01093 [Bacteroides pectinophilus ATCC
           43243]
          Length = 462

 Score = 79.1 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 50/335 (14%), Positives = 103/335 (30%), Gaps = 46/335 (13%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPS 374
            N+        T     T  L+P    G    F +  + S +++P  + + G  +RNE +
Sbjct: 151 FNLMFKTFQGVTEDAKNTVYLRPETAQGIFVNFKNVQRTSRKKVPFGIGQIGKSFRNEIT 210

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              +   R R F Q +   FC             +  I+  K  G +   ++      + 
Sbjct: 211 PG-NFTFRTREFEQMELEFFCKPGTDLEWFNYWRSYCINWLKSLGMKDDEMRARDHSPEE 269

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           +                     +     I      G G  +G   +    D         
Sbjct: 270 L------------------CFYSKGTTDIEFLFPFGWGELWGIA-DRTDYD--------- 301

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLP--- 547
            +    N+     +++ +   EK  P +I     G+    +  +     E   G      
Sbjct: 302 -LTQHQNVSGEDMSYFDDESKEKYIPYVIE-PSLGADRVTLAFLCSAYDEEEIGEGDVRT 359

Query: 548 -----LWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
                  L+P++  +  ++    E A++I   L     + E D R   I  + R      
Sbjct: 360 VLHFHPALAPVKIGILPLSKKLNEGAEKIYAELSKK-YNCEFDDRGN-IGKRYRRQDEIG 417

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
            P  I       ++ ++ +R   +   +++ + D 
Sbjct: 418 TPFCITYDFDSETDGAVTVRDRDTMQQERIKIEDL 452


>gi|109076884|ref|XP_001087588.1| PREDICTED: threonyl-tRNA synthetase, cytoplasmic-like [Macaca
           mulatta]
          Length = 77

 Score = 79.1 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 29/64 (45%), Gaps = 1/64 (1%)

Query: 581 SIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
             + D     T+N KIR   + +   I++ G+KE    ++ IR   +    + ++ + + 
Sbjct: 1   MADIDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKISGTVNIRTRDNKVHGERTISETME 60

Query: 640 ILTK 643
            L +
Sbjct: 61  RLQQ 64


>gi|326334002|ref|ZP_08200231.1| glycine--tRNA ligase [Nocardioidaceae bacterium Broad-1]
 gi|325948151|gb|EGD40262.1| glycine--tRNA ligase [Nocardioidaceae bacterium Broad-1]
          Length = 466

 Score = 79.1 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 51/376 (13%), Positives = 122/376 (32%), Gaps = 50/376 (13%)

Query: 280 ISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF-ALKP 338
             Y  +K   D + ++  +V+        G W   R     +K     ++D      L+P
Sbjct: 108 EEYAEKKGIADPDSVDINEVVACPNCGTRGAWTEPREFSGMLKTHLGVLEDESGLHYLRP 167

Query: 339 MNCPGHVAVFNHGLKSYRELP-VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK 397
               G    F + + S R+ P   +A+ G  +RNE +   + + R R F Q +   F   
Sbjct: 168 ETAQGIFVNFANVVTSTRQKPPFGIAQTGKSFRNEITPG-NFIFRTREFEQMEMEFFVKP 226

Query: 398 EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKN 457
            +         +     Y D G     ++     +         +   +  K  +D    
Sbjct: 227 GEDEEWHQYWIDERTRWYTDLGINPDNLRHYEHAQ---------EKLSHYSKRTVDIEYR 277

Query: 458 SSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK 517
            +      G L G       + ++ L            ++        F+     +++E+
Sbjct: 278 FNFPGSEWGELEGIAN----RTDFDL---------GTHMKHSGQDLQYFD----QANNER 320

Query: 518 CHPVMIHRAVFGSIERFIGIMIENFKGNLPLW----------------LSPIQAIVTTIT 561
             P +I     G     +  +++ +                       ++P++  V  ++
Sbjct: 321 YLPYVIE-PAAGLTRALMTFLVDGYAEEEAPNAKGGVDKRVVLRLDHRIAPVKIAVLPLS 379

Query: 562 --SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSI 619
              +    A+ ++  L+  + +++ D   ++I  + R       P  +        + ++
Sbjct: 380 RNEALSPKAKALSAELR-QNWAVDFDDS-QSIGKRYRRQDEIGTPYCVTVDFDTLEDNAV 437

Query: 620 GIRRFGSTTTQKVSLL 635
            IR   +   +++ L 
Sbjct: 438 TIRERDTMKQERIPLE 453


>gi|255994489|ref|ZP_05427624.1| glycine--tRNA ligase [Eubacterium saphenum ATCC 49989]
 gi|255993202|gb|EEU03291.1| glycine--tRNA ligase [Eubacterium saphenum ATCC 49989]
          Length = 466

 Score = 79.1 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 53/383 (13%), Positives = 111/383 (28%), Gaps = 65/383 (16%)

Query: 272 GWKIFQTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
           GW   + ++S++         E+  P     +             N+        T    
Sbjct: 122 GWT-NEKMMSFLEEH------EVKCPNCGKHNFTDIRQF------NLMFKTYQGVTEGAK 168

Query: 332 RTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
               L+P    G    F    +S  ++LP  + + G  +RNE +   + + R R F Q +
Sbjct: 169 AEIYLRPETAQGIFVNFKSVQRSMRKKLPFGICQIGKSFRNEITPG-NFIFRTREFEQME 227

Query: 391 AHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKG 450
              FC  ++         N  +   K  G ++  ++                      K 
Sbjct: 228 LEFFCAPDESMGWFDFWQNYCVEFLKTIGIKEENIRKREHS-----------------KE 270

Query: 451 VLDTIKNSSQDRINTGVLLGEGAFYGPK--FEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
            L     ++ D I      G G  +G     ++ LK            Q           
Sbjct: 271 ELSHYSEATTD-IEYNFSFGWGELWGIANRTDFDLK------------QHTKESGE--EL 315

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK--------------GNLPLWLSPIQ 554
            Y +  + +           G+    + ++ + ++                L  +L+P +
Sbjct: 316 VYQDPETNRKFTPYCIEPSLGADRLLLAVLNDAYEEEIVDKDKNTSRVVMRLHPYLAPYK 375

Query: 555 AIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
           A V  ++      +  I   L      ++ D    +I  + R       P  I       
Sbjct: 376 AAVLPLSKQLSSVSDPIFEKLIKDFP-VDYDKTG-SIGKRYRRQDEIGTPYCICVDFDTE 433

Query: 615 SERSIGIRRFGSTTTQKVSLLDA 637
            +  + IR   +    ++ + + 
Sbjct: 434 KDGKVTIRDRDTMEQTRIGIDEV 456


>gi|325102964|ref|YP_004272618.1| glycyl-tRNA synthetase [Pedobacter saltans DSM 12145]
 gi|324971812|gb|ADY50796.1| glycyl-tRNA synthetase [Pedobacter saltans DSM 12145]
          Length = 490

 Score = 79.1 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 56/346 (16%), Positives = 112/346 (32%), Gaps = 53/346 (15%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+          +      L+P    G    F +  KS   ++P  +A+ G  +RNE  
Sbjct: 167 FNLMFSTQMGAMAEGSDEVYLRPETAQGIFVNFLNVQKSGRMKIPFGIAQIGKAFRNEVI 226

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
            +   +MR+R F Q +   F           K     +  +   G      +     +  
Sbjct: 227 -ARQFIMRMREFEQMELQFFVKPGTEMEWYKKWKETRLKWHLALGTNPAKYRFHDHTKLA 285

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
             ++A  D                 +     G    EG     + ++ LK    +++   
Sbjct: 286 HYANAAVDI----------------EFEFPFGFKEVEGIH--SRTDFDLK--QHQEFSGK 325

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK----------- 543
            +Q              +    + +   +     G    F+  +I  ++           
Sbjct: 326 KLQFF------------DPEINQSYVPYVVETSIGVDRFFLATLINAYEEQDLSTEDKKD 373

Query: 544 ----GNLPLWLSPIQAIVTTITSSAV--EYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
                +L   L+P +A V  +T      E A+EI N LK    ++  D ++ +I  + R 
Sbjct: 374 SRTVLHLHPVLAPYKAAVLPLTKKDGLPEKAREIMNRLK-LDYNVTYDEKD-SIGKRYRR 431

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
                 P  I    +   + ++ IR   S   +++S+ D   I+ +
Sbjct: 432 QDAIGTPFCITVDHQSLEDNTVTIRHRDSMEQERISIADLDRIIGE 477


>gi|313665392|ref|YP_004047263.1| glycine--tRNA ligase [Mycoplasma leachii PG50]
 gi|312949347|gb|ADR23943.1| glycine--tRNA ligase [Mycoplasma leachii PG50]
          Length = 456

 Score = 79.1 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 43/346 (12%), Positives = 96/346 (27%), Gaps = 51/346 (14%)

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YREL 358
             +   Q       ++ N   ++       D     L+P    G    F +  +S  ++L
Sbjct: 135 QKKDFTQIRKFALMFKTNQGVLED------DSSIVYLRPETAQGIFINFKNVQRSMRKKL 188

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P  + + G  +RNE +   + + R R F Q +   F             ++      +  
Sbjct: 189 PFGIGQIGKSFRNEITPG-NFIFRTREFEQMELEFFFDPNDS-------NDWFKYWLEQI 240

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
                      +   ++  +   + A   +K                G+           
Sbjct: 241 EIFLTQKISLDKNNYKIRENLKDELAHYALKTSDIEFNFPFGWGELWGI----------- 289

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI- 537
                     R      +  D +     +   +   + +     +     G     + I 
Sbjct: 290 --------SHRSDFDLKVHQDLSKE---DLTVLKEENNQKILANVIEPSVGVERLMLAIF 338

Query: 538 --------MIENFK---GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF 586
                   + EN       LP  L+P Q  +T ++    + A ++   L         D 
Sbjct: 339 WQAYTEEQLEENNSRIVLKLPYNLAPYQVAITPLSKQLNQNANQLFLELLK-DFDAVYDE 397

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
               I  + R       P +I    +   ++ + IR   +   +++
Sbjct: 398 TGN-IGKRYRRQDAIGTPFVITYDFQTLEDQKVTIRYRDTMKQERI 442


>gi|237719787|ref|ZP_04550268.1| glycyl-tRNA synthetase [Bacteroides sp. 2_2_4]
 gi|229451056|gb|EEO56847.1| glycyl-tRNA synthetase [Bacteroides sp. 2_2_4]
          Length = 513

 Score = 79.1 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 55/345 (15%), Positives = 113/345 (32%), Gaps = 54/345 (15%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T +      L+P    G    + +  K+   ++P  +A+ G  +RNE  
Sbjct: 194 FNLMFSTEMGSTSEGAMKIYLRPETAQGIFVNYLNVQKTGRMKVPFGIAQIGKAFRNEIV 253

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
            +   + R+R F Q +   F     E  + +  K   L       FG          +  
Sbjct: 254 -ARQFIFRMREFEQMEMQFFVKPGTELDWFKKWKEIRLKWHKALGFGDASYRYHDHDKLA 312

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
                    + A +I            +  +  G    EG      F+            
Sbjct: 313 HYA------NAATDI------------EFLMPFGFKEVEGIHSRTNFD------------ 342

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM--------IENFK- 543
              +        +   ++    +E   P +I  ++ G    F+ IM        +EN + 
Sbjct: 343 ---LSQHEKFSGKSIKYFDPELNESYTPYVIETSI-GVDRMFLSIMSASYCEEQLENGES 398

Query: 544 ---GNLPLWLSPIQAIVTTITSSAV--EYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
                LP  L+P++  V  +       E A+E+ + LK  H   + D ++ +I  + R  
Sbjct: 399 RVVLKLPAALAPVKLAVMPLVKKDSLPEKAREVIDSLK-FHFHCQYDEKD-SIGKRYRRQ 456

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
                P  +    +   +  + +R   +   ++V++ +   I+  
Sbjct: 457 DAIGTPYCVTVDHQTLEDNCVTLRNRDTMQQERVAISELNNIIAD 501


>gi|226360355|ref|YP_002778133.1| glycyl-tRNA synthetase [Rhodococcus opacus B4]
 gi|226238840|dbj|BAH49188.1| glycyl-tRNA synthetase [Rhodococcus opacus B4]
          Length = 468

 Score = 79.1 bits (193), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 60/387 (15%), Positives = 124/387 (32%), Gaps = 57/387 (14%)

Query: 280 ISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPM 339
            +Y  +K  D+ +++    V            +    NM           +     L+P 
Sbjct: 111 EAYAEKKGLDNPDDVPMDVVGCPDCGTVGQWTEPRDFNMMLKTYLGPVESEEGMHYLRPE 170

Query: 340 NCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE 398
              G    F + L  S ++ P  + + G  +RNE +   + + R R F Q +   F    
Sbjct: 171 TAQGIFVNFANVLTTSRKKPPFGIGQIGKSFRNEITPG-NFIFRTREFEQMEMEFFVKPG 229

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIM----KGVLDT 454
           +         +  +  Y   G  K  ++             L++ A++ +    K  +D 
Sbjct: 230 EDEEWHQYWIDYRMDWYTGLGINKDNLR-------------LYEHAQDKLSHYSKRTVDI 276

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH 514
                      G L G       + ++ L               D N       +Y  + 
Sbjct: 277 EYRFHFQGSEWGELEGVAN----RTDFDLSTHSKHSGT------DLN-------YYDQAS 319

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW----------------LSPIQAIVT 558
            E+  P +I     G     +  +++ +  +                    L+P++A V 
Sbjct: 320 GERYTPYVIE-PAAGLTRSLMAFLVDAYTEDEAPNAKGGVDKRTVLRLDRRLAPVKAAVL 378

Query: 559 TITSSAV--EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASE 616
            ++ +A     A+++A  L+ H  ++E D     I  + R       P  I        +
Sbjct: 379 PLSRNADLTPKAKDLAATLRQH-WNVEFDDAGA-IGRRYRRQDEIGTPFCITVDFDTLED 436

Query: 617 RSIGIRRFGSTTTQKVSLLDAIPILTK 643
            ++ +R   S   ++V+L      L +
Sbjct: 437 HAVTVRERDSMAQERVALDQVEGYLAQ 463


>gi|331698238|ref|YP_004334477.1| glycyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190]
 gi|326952927|gb|AEA26624.1| glycyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190]
          Length = 465

 Score = 79.1 bits (193), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 54/346 (15%), Positives = 109/346 (31%), Gaps = 49/346 (14%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPS 374
            NM           D     L+P    G    F +    S ++ P  + + G  +RNE +
Sbjct: 144 FNMMLETHLGPVKTDEGLHYLRPETAQGIFVNFLNVQTTSRKKPPFGIGQMGKSFRNEIT 203

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              + + R R F Q +   F              +     Y D G  +  ++    P+  
Sbjct: 204 PG-NFIFRTREFEQMEMEYFVEPGTDEELHQYWIDERTRWYTDLGIARENLRHYEHPK-- 260

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
                  +   +  K  +D            G L G            + +    D    
Sbjct: 261 -------EKLSHYSKRTVDIEYRFEFTGQEWGELEG------------IANRTDFDLTTH 301

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW----- 549
           +     +L      FY  +   +  P +I     G     +  +IE +  +         
Sbjct: 302 SNHSGVDLS-----FYDQASGTRYRPYVIE-PAAGVGRSMMAFLIEAYTEDEAPNAKGGV 355

Query: 550 -----------LSPIQAIVTTITSSAV--EYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                      L+P++A V  ++ +A     A+++A  L+  + ++E D     I  + R
Sbjct: 356 DKRVVLRLDRRLAPVKAAVLPLSRNADLSPKARDLAAALR-RNWNVEFDDAGA-IGRRYR 413

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
                  P  I       +++++ IR   + + ++++L      L 
Sbjct: 414 RQDEIGTPFCITVDFDTLTDQAVTIRERDTMSQERIALDQVESYLA 459


>gi|332291587|ref|YP_004430196.1| glycyl-tRNA synthetase [Krokinobacter diaphorus 4H-3-7-5]
 gi|332169673|gb|AEE18928.1| glycyl-tRNA synthetase [Krokinobacter diaphorus 4H-3-7-5]
          Length = 511

 Score = 78.7 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 58/347 (16%), Positives = 112/347 (32%), Gaps = 41/347 (11%)

Query: 308 SGHWDSYRA-NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEF 365
           S +W   R  N+        + +      L+P    G    F +  K+   ++P  +A+ 
Sbjct: 186 SKNWTDVRQFNLMFGTKLGASAETATDLYLRPETAQGIFVNFLNVQKTGRMKIPFGIAQT 245

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKI 423
           G  +RNE   +   + R+R F Q +   F     E  + E  K   L        G E  
Sbjct: 246 GKAFRNEIV-ARQFIFRMREFEQMEMQFFVRPGEEMKWYEHWKETRLKWHKSLGLGEENY 304

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
                 +      +    +         L+ I + +   +            G K ++  
Sbjct: 305 RFHDHEKLAHYANAATDIEFNFPFGFKELEGIHSRTDFDLKAHEEHS-----GKKLQFF- 358

Query: 484 KDAIGRDWQCG-----TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            D    +         +I +D    + F+A   +   E     ++               
Sbjct: 359 -DPELNESYVPYVVETSIGLDRMFLAVFSASLQDEELENGTSRVV--------------- 402

Query: 539 IENFKGNLPLWLSPIQAIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                  LP  L+P++A +  +       E AQ+I + LK +   +  D ++  +  + R
Sbjct: 403 -----LKLPAILAPVKAAILPLVKKDGLPEVAQKIIDDLK-YDYRVAYDEKDA-VGRRYR 455

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
                  P+ I        +  + +R   +   Q+V + D   IL K
Sbjct: 456 RQDAAGTPLCITVDHDTLEDNMVTVRDRDTMEQQRVLITDLPDILNK 502


>gi|299535815|ref|ZP_07049136.1| glycyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
 gi|298729015|gb|EFI69569.1| glycyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
          Length = 461

 Score = 78.7 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 48/341 (14%), Positives = 103/341 (30%), Gaps = 46/341 (13%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    F +  +S  +  P  +A+ G  +RNE +
Sbjct: 150 FNLMFKTFQGVTESSTNEIYLRPETAQGIFVNFKNVQRSMRKRTPFGIAQIGKSFRNEIT 209

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              +   R R F Q +   FC   +             +   + G ++  ++L    +  
Sbjct: 210 PG-NFTFRTREFEQMELEFFCKPGEDLEWHAYWKEFCKNWLLNLGMKEDSMRLRDHEDDE 268

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           +   + + +A   +       K         GV   +   Y  K                
Sbjct: 269 L---SHYSNATTDI-----EFKFPFGWGELWGV--ADRTDYDLK---------------- 302

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK----------- 543
             Q   +    F  +     +E+  P  I     G+    +  + + +            
Sbjct: 303 --QHMEHSGEDF-TYIDPVSNERYVPYCIE-PSLGADRVTLAFLCDAYDEEELEGDDKRT 358

Query: 544 -GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
                  L+P +A V  ++    + A ++   L+     ++ D   ++I  + R      
Sbjct: 359 VLRFHPALAPFKAAVLPLSKKLSDEATDVWAELRKAFP-VDFDES-QSIGKRYRRQDEIG 416

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            P  I        +  + +R   S T  ++ + +    + K
Sbjct: 417 TPFCITYDFDSKEDGQVTVRHRDSMTQVRMPIAEVKAYIEK 457


>gi|262382896|ref|ZP_06076033.1| glycyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
 gi|262295774|gb|EEY83705.1| glycyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
          Length = 514

 Score = 78.7 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 55/331 (16%), Positives = 106/331 (32%), Gaps = 26/331 (7%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    F +  K+   ++P  +A+ G  +RNE  
Sbjct: 194 FNLMFSTDMGSTADGATKIYLRPETAQGIFVNFLNVQKTGRMKIPFGIAQIGKAFRNEIV 253

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
            +   + R+R F Q +   F    +      K  +  +  ++  G      +     +  
Sbjct: 254 -ARQFIFRMREFEQMEMQFFVRPGEEIEWFKKWKSTRLKWHQALGLGDEKYRYHDHEKLA 312

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
             ++A  D                 +  +  G    EG      F+     +    +   
Sbjct: 313 HYANAATDI----------------EFEMPFGFKEVEGIHSRTNFDL----SQHEKFSGK 352

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQ 554
            IQ      ++    YV   S     V +        E  +          LP  L+PI+
Sbjct: 353 KIQYFDPELNQSYTPYVIETSIGVDRVFLSIMAGSYCEETLANGESRVVLKLPAALAPIK 412

Query: 555 AIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
             V  +       E A+EI N+L+      + D ++ +I  + R       P  I     
Sbjct: 413 LAVLPLVKKDGLPEKAEEIINMLR-FDFRCQYDEKD-SIGKRYRRQDAIGTPYCITVDHD 470

Query: 613 EASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              +  + IR   +   +++S+     I+T+
Sbjct: 471 TLKDNCVTIRFRDTMEQERISIDKLHDIITE 501


>gi|254525907|ref|ZP_05137959.1| seryl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
 gi|221537331|gb|EEE39784.1| seryl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
          Length = 425

 Score = 78.7 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 42/251 (16%), Positives = 87/251 (34%), Gaps = 20/251 (7%)

Query: 213 NRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFH----IAEDGSGVIFW 268
           N P  +   G   N   ++  +   L +   + H ++   +++F          S  +  
Sbjct: 110 NSPSKNAPIGKDENDNVQVKTWGNPLTDDNLKSHWEIGESLNIFDSVKSTKISKSRFVTL 169

Query: 269 HRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
              G ++ + LI++M     K+ Y E+  P +++    + SG    +    F     D  
Sbjct: 170 IGNGARLERALINFMLDMHTKNGYLELMPPALVNSESLKGSGQLPKFSNESFKCSNDD-- 227

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVR 384
                   L P       A   + L   ++LP++   +   +R E         GL+R+ 
Sbjct: 228 ------LWLSPTAEVPLTAFHRNELIDPKQLPIKYVAYSPCFRREAGSYGKDTKGLIRLH 281

Query: 385 GFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP----EKRVGSDAL 440
            F + + + FC   +      KI +   +I K       +V + T        R     +
Sbjct: 282 QFNKVELYWFCDPTKSLEAHKKITSDAENILKKLNLPYRLVDICTGDLGFSSSRTFDLEV 341

Query: 441 WDDAENIMKGV 451
           W  +    + +
Sbjct: 342 WLPSSKCYREI 352


>gi|169829162|ref|YP_001699320.1| glycyl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
 gi|238688185|sp|B1HTI6|SYG_LYSSC RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|168993650|gb|ACA41190.1| Glycyl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
          Length = 461

 Score = 78.7 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 47/330 (14%), Positives = 104/330 (31%), Gaps = 24/330 (7%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    F +  +S  +  P  +A+ G  +RNE +
Sbjct: 150 FNLMFKTFQGVTESSTNEIFLRPETAQGIFVNFKNVQRSMRKRTPFGIAQIGKSFRNEIT 209

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
              +   R R F Q +   FC   E +            +   + G ++  ++L    + 
Sbjct: 210 PG-NFTFRTREFEQMELEFFCKPGEDLEWHSY-WKEFCKNWLLNLGMKEDSMRLRDHEDD 267

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
            +   + + +A   +       K         G+   +   Y  K    ++ +       
Sbjct: 268 EL---SHYSNATTDI-----EFKFPFGWGELWGI--ADRTDYDLKQ--HMEHSGEDFTYI 315

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI 553
             +  D  +P      Y    S     V +        E  +    +         ++P 
Sbjct: 316 DPVSNDRYIP------YCIEPSLGADRVTLAFLCDAYDEEELEGDDKRTVLRFHPAIAPF 369

Query: 554 QAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
           +A V  ++    + A ++   L+     ++ D   ++I  + R       P  I      
Sbjct: 370 KAAVLPLSKKLSDEATDVWAELRKAFP-VDFDES-QSIGKRYRRQDEIGTPFCITYDFDS 427

Query: 614 ASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             +  + +R   S T +++ + +    + K
Sbjct: 428 KEDGQVTVRHRDSMTQERMPISEVKAYIEK 457


>gi|323483766|ref|ZP_08089146.1| hypothetical protein HMPREF9474_00895 [Clostridium symbiosum
           WAL-14163]
 gi|323402957|gb|EGA95275.1| hypothetical protein HMPREF9474_00895 [Clostridium symbiosum
           WAL-14163]
          Length = 462

 Score = 78.7 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 49/335 (14%), Positives = 107/335 (31%), Gaps = 46/335 (13%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPS 374
            N+        T     T  L+P    G    F +  + S +++P  +A+ G  +RNE +
Sbjct: 151 FNLMFKTFQGVTEDAKNTVYLRPETAQGIFVNFKNVQRTSRKKVPFGIAQVGKSFRNEIT 210

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              +   R R F Q +   FC  +             I+  K  G +++ ++     ++ 
Sbjct: 211 PG-NFTFRTREFEQMELEFFCEPDTDLEWFAYWKEYCINWLKALGIKEVEMRARDHEQEE 269

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           +   + +  A   +   L          I                      A   D+   
Sbjct: 270 L---SFYSKATTDI-EFLFPFGWGELWGI----------------------ADRTDYDLT 303

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI------ENFKGNLPL 548
             Q         +  Y +   +  +   +     G+    +  +       E  +G++  
Sbjct: 304 QHQNTSGQ----DMTYFDDEKKIKYIPYVIEPSLGADRVTLAFLCAAYDEEEIGEGDVRT 359

Query: 549 WL------SPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            L      +P++  V  ++    E A+++ N L  +  + E D R   I  + R      
Sbjct: 360 VLHFHPAIAPVKIGVLPLSKKLNEGAEKVYNELCKY-YNCEFDDRGN-IGKRYRRQDEIG 417

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
            P  I       ++ ++ +R   +    +V + + 
Sbjct: 418 TPFCITYDFDSETDGAVTVRDRDTMEQVRVPITEL 452


>gi|260172254|ref|ZP_05758666.1| glycyl-tRNA synthetase [Bacteroides sp. D2]
 gi|315920560|ref|ZP_07916800.1| glycyl-tRNA synthetase [Bacteroides sp. D2]
 gi|313694435|gb|EFS31270.1| glycyl-tRNA synthetase [Bacteroides sp. D2]
          Length = 513

 Score = 78.7 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 55/345 (15%), Positives = 113/345 (32%), Gaps = 54/345 (15%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T +      L+P    G    + +  K+   ++P  +A+ G  +RNE  
Sbjct: 194 FNLMFSTEMGSTSEGAMKIYLRPETAQGIFVNYLNVQKTGRMKVPFGIAQIGKAFRNEIV 253

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
            +   + R+R F Q +   F     E  + +  K   L       FG          +  
Sbjct: 254 -ARQFIFRMREFEQMEMQFFVKPGTELDWFKKWKEIRLKWHKALGFGDASYRYHDHDKLA 312

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
                    + A +I            +  +  G    EG      F+            
Sbjct: 313 HYA------NAATDI------------EFLMPFGFKEVEGIHSRTNFD------------ 342

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM--------IENFK- 543
              +        +   ++    +E   P +I  ++ G    F+ IM        +EN + 
Sbjct: 343 ---LSQHEKFSGKSIKYFDPELNESYTPYVIETSI-GVDRMFLSIMSASYCEEQLENGES 398

Query: 544 ---GNLPLWLSPIQAIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
                LP  L+P++  V  +       E A+E+ + LK  H   + D ++ +I  + R  
Sbjct: 399 RVVLKLPAALAPVKLAVMPLVKKDGLPEKAREVIDSLK-FHFHCQYDEKD-SIGKRYRRQ 456

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
                P  +    +   +  + +R   +   ++V++ +   I+  
Sbjct: 457 DAIGTPYCVTVDHQTLEDNCVTLRNRDTMQQERVAISELNNIIAD 501


>gi|42525539|ref|NP_970637.1| glycyl-tRNA synthetase [Treponema denticola ATCC 35405]
 gi|59798570|sp|Q73RR5|SYG_TREDE RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|41815550|gb|AAS10518.1| glycyl-tRNA synthetase [Treponema denticola ATCC 35405]
          Length = 451

 Score = 78.7 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 61/440 (13%), Positives = 137/440 (31%), Gaps = 76/440 (17%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEIN---TPQVLDQHLWQQSGHWDSY 314
           I    +G   +   G ++   +     +++   ++ I       ++    W+ SGH +++
Sbjct: 27  IYGGQNGAWDYGPLGIELKNNVSRAWWKEMTQLHDNIVGLDAAILMHPRTWEASGHVENF 86

Query: 315 ----------------------------------------RANMFAVKCADDTIKDLRTF 334
                                                   + N+        T  +    
Sbjct: 87  TDPLVDCKKCKSRFRADHLPPENLEKRVCPDCGGELTDTRKFNLMFKTHIGPTDDNSSVI 146

Query: 335 ALKPMNCPGHVAVFNHGLKSYR-ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
            L+P    G    + + ++S R ++P  +A+ G  +RNE   + + + R   F Q +   
Sbjct: 147 YLRPETAQGIYVNYKNIIQSNRMKIPFGIAQIGKAFRNEIV-TKNFIFRTCEFEQMEMQF 205

Query: 394 FCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
           F     +  + +  K      + Y+ +G     ++         G D L   A++     
Sbjct: 206 FVKPGTDDEWFDYWK--KQRWAFYEKYGVRTNKLQWHQH-----GKDELAHYAKDAYDIE 258

Query: 452 LDT-IKNSSQDRIN--TGVLLGEGAFYGPKFEYILKDAI-GRDWQCGTIQVDFNLPSRFN 507
            +  +     + ++  T   L     Y  K +    D   G +     I       +R  
Sbjct: 259 YEFPMGFKELEGVHNRTNYDLTRHTEYSGK-DMQYIDQDNGNEKYIPYIIETSAGLTRNV 317

Query: 508 AFYV-NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTI--TSSA 564
             ++ +++ E+      +   + ++ RF               ++PI   V  +      
Sbjct: 318 LMFICDAYDEEKVADKGNDDDWRTVLRFH------------PNIAPITVAVLPLMKKDGL 365

Query: 565 VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRF 624
            E A+EI N LK      + D     I  + R       P  +        + ++ +R  
Sbjct: 366 AELAEEIRNELKEE-FKTDYDQSGA-IGKRYRRQDEVGTPFCVTVDYDSKEDNTVTLRFR 423

Query: 625 GSTTTQKVSLLDAIPILTKE 644
            S    ++   + I  +  E
Sbjct: 424 DSMEQVRIPRTELISRIKTE 443


>gi|307566163|ref|ZP_07628618.1| glycine--tRNA ligase [Prevotella amnii CRIS 21A-A]
 gi|307345128|gb|EFN90510.1| glycine--tRNA ligase [Prevotella amnii CRIS 21A-A]
          Length = 517

 Score = 78.7 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 63/348 (18%), Positives = 114/348 (32%), Gaps = 60/348 (17%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T +  +   L+P    G    F +  K+   +LP  +A+ G  +RNE  
Sbjct: 194 FNLMFSTEMGSTAEGSQKIYLRPETAQGIFVNFLNVQKTGRMKLPFGIAQIGKAFRNEIV 253

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
            +   + R+R F Q +   FC    E  + E  K H L        G E        +  
Sbjct: 254 -ARQFVFRMREFEQMEMQFFCQPGTEMKWFEYWKAHRLAWHEGLGMGDENYRFHDHDKLA 312

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
                    + A +I            +  +  G    EG      F+            
Sbjct: 313 HYA------NAATDI------------EFHLPFGFKEIEGIHSRTNFD------------ 342

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK--------- 543
              +        R   ++    +E   P ++  ++ G    F+ +M   ++         
Sbjct: 343 ---LSQHEKFSGRQIKYFDPELNENYTPYVVETSI-GVDRMFLSVMCHAYQEEKLDNGSS 398

Query: 544 ---GNLPLWLSPIQAIVTTITSSAV--EYAQEIANLLKSH---HLSIETDFRNETINYKI 595
                LP  L+PI+  V  + +     E AQEI N LK H   H+  +     ++I  + 
Sbjct: 399 RIVLKLPEPLAPIKCAVLPLVNKDGLPEKAQEIVNDLKFHFTTHMEAK-----DSIGKRY 453

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           R       P  +       SE ++ +R   +   ++V +     I+  
Sbjct: 454 RRQDAIGTPFCVTVDGNTLSEGTVTLRYRDTMEQERVPISKLREIIED 501


>gi|302871793|ref|YP_003840429.1| glycyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
 gi|302574652|gb|ADL42443.1| glycyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
          Length = 434

 Score = 78.7 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 68/450 (15%), Positives = 149/450 (33%), Gaps = 91/450 (20%)

Query: 251 REMDLFH---IAEDGSGVIFWHRKGWKIFQTLISYMRR---KIKDDYEEINTPQVLDQHL 304
           R   +F    I    +    +   G ++   +     +   +++DD   +++  +++  +
Sbjct: 13  RRGFIFQSSEIYGGLNSCWDYGPLGVEMKNNIKRLWWKANVQLRDDVVGLDSSILMNPKV 72

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA---VFNHGLKSY------ 355
           W+ SGH  ++   M   K      +  +    K   C G +    +FN   K++      
Sbjct: 73  WEASGHLSNFADPMADCKVCKKRWRTDQLQEYKCPECGGELTEARMFNLMFKTFMGPVED 132

Query: 356 ---------------------------RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQ 388
                                      ++LP  +A+ G  +RNE +   + + R R F Q
Sbjct: 133 ESAVVYLRPETAQGIFVNFVNVQQTMRKKLPFGIAQIGKSFRNEITPG-NFIFRTREFEQ 191

Query: 389 DDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIM 448
            +   F              +  I+ Y   G  K  +++        G + L   A+  +
Sbjct: 192 MEIEYFVKPGTDDYWHRHWIDQRINWYYKLGIRKENLRIREH-----GKNELAHYAKACV 246

Query: 449 K-GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFN 507
               L  +  S  + I              + ++ L                    S  N
Sbjct: 247 DIEYLFPMGWSELEGI------------ANRTDFDLT--------------QHQKYSGEN 280

Query: 508 AFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK------------GNLPLWLSPIQA 555
             Y +  +++ +   +     G     +  +I+ ++             +L   ++P++A
Sbjct: 281 LSYFDDETKQRYIPYVIEPSAGVDRSLLAFLIDAYEYQQIDKDDFRVVLHLHPAIAPVKA 340

Query: 556 IVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
            V  +      V+ A+EI N LK   + ++ D    +I  + R       P  I    + 
Sbjct: 341 AVFPLLKKEELVKKAREIYNELKYKWI-VQYDESG-SIGKRYRRQDEIGTPFGITVDYQT 398

Query: 614 ASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             + ++ IR   +    +V + + IP L +
Sbjct: 399 LEDETVTIRDRDTMEQVRVHIKEIIPYLEE 428


>gi|193216690|ref|YP_001999932.1| glycyl-tRNA synthetase [Mycoplasma arthritidis 158L3-1]
 gi|193002013|gb|ACF07228.1| glycyl-tRNA synthetase [Mycoplasma arthritidis 158L3-1]
          Length = 463

 Score = 78.7 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 55/374 (14%), Positives = 119/374 (31%), Gaps = 53/374 (14%)

Query: 288 KDDYEEINTPQVLDQHLWQQSGH---WDSYRA-NMFAVKCADDTIKDLRTFALKPMNCPG 343
           K  ++E+ T  ++   + +  G    W + R  N+                 L+P    G
Sbjct: 120 KATFQELET--IIKSRVKEYDGAKCDWSTIRPFNLMFRTEMGAISNSASQVYLRPETAQG 177

Query: 344 HVAVFNHGLKSYR-ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN 402
               F + L++ R +LP  + + G  +RNE +     + R R F Q +   FC ++    
Sbjct: 178 IFVNFKNVLRTTRAKLPFGIGQIGKSFRNEITPR-DFIFRTREFEQMELEFFCLEQDANK 236

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
                 N   S     G +   +++                     K  L      + D 
Sbjct: 237 FYEYWINKCHSFVSSLGLKANNIRIRPHE-----------------KEELSHYSKGTSD- 278

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
           I      G    +G       +            Q         +  Y+     K  P +
Sbjct: 279 IEYFFPFG----WGELLGIANRGNFDLSQHMKFSQE--------SLEYLQEDGSKVVPWV 326

Query: 523 IHRAVFGSIERFIGIMIENFK------------GNLPLWLSPIQAIVTTITSSAVEYAQE 570
           I     G     + +++++++             +L   ++P Q  +  +T +    A+E
Sbjct: 327 IE-PSIGLDRLLLALLVDSYEVEDLGNDDKRTILHLNYNIAPYQLAIFPLTKALAPKARE 385

Query: 571 IANLLKSH-HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           I + L     + +  D    +I  + R       P  +    +     ++ IR   +   
Sbjct: 386 IYDELIDKSTIRLVYDESG-SIGKRYRRQDAIGTPFALTVDHESLETGTVTIRERDTMKQ 444

Query: 630 QKVSLLDAIPILTK 643
            ++++ + +  L +
Sbjct: 445 IRINISEIVNYLNQ 458


>gi|255534200|ref|YP_003094571.1| glycyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10]
 gi|255340396|gb|ACU06509.1| Glycyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10]
          Length = 519

 Score = 78.7 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 59/357 (16%), Positives = 111/357 (31%), Gaps = 56/357 (15%)

Query: 308 SGHWDSYRA-NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH-GLKSYRELPVRLAEF 365
           S +W   R  N+        +        L+P    G    F +    S  +LP  +A+ 
Sbjct: 192 SKNWTDVRQFNLMFGTKLGASADSATDLYLRPETAQGIFVNFLNVQKTSRHKLPFGIAQI 251

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKI 423
           G  +RNE   +   + R+R F Q +   F     E  F E  K   L   +    G E  
Sbjct: 252 GKAFRNEIV-ARQFIFRMREFEQMEMQFFVPPGTELDFYEEWKQKRLNWHLALGLGAENY 310

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
                 +                      D      + +   G    EG      F+   
Sbjct: 311 KFHDHEKLAHYAN-------------AAADI-----EFKFPFGFKELEGIHSRTDFDL-- 350

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI------ 537
             +         +Q              +  +E   P ++  +V G    F+ I      
Sbjct: 351 --SAHEKHSGRKLQYFD-----------SERNENYVPFVVETSV-GLDRLFLAIFSNSLK 396

Query: 538 --MIENFKGNL----PLWLSPIQAIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNE 589
             ++E+         P  L+P++A +  +       EY ++I N LK    ++      +
Sbjct: 397 DEVLEDGSERTVLSLPPALAPVKAAILPLMKKDGLGEYGEKIFNDLK-FDFNV-IYEDKD 454

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           +I  + R       P  I        + ++ +R   +   ++V++ D +  +  E  
Sbjct: 455 SIGKRYRRQDAIGTPFCITIDHDTLKDNTVTLRDRDTMKQERVAVAD-LRRIIDEKT 510


>gi|213691693|ref|YP_002322279.1| glycyl-tRNA synthetase [Bifidobacterium longum subsp. infantis ATCC
           15697]
 gi|213523154|gb|ACJ51901.1| glycyl-tRNA synthetase [Bifidobacterium longum subsp. infantis ATCC
           15697]
 gi|320457784|dbj|BAJ68405.1| glycyl-tRNA synthase [Bifidobacterium longum subsp. infantis ATCC
           15697]
          Length = 490

 Score = 78.7 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 58/379 (15%), Positives = 114/379 (30%), Gaps = 48/379 (12%)

Query: 278 TLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALK 337
            L      K  D   E     ++  +   +    +    NM           +     L+
Sbjct: 102 KLEESYAEKHGDKMPENGMKDIVCPNCGTRGQWTEPRDFNMMLRTHLGPVEDENSLHYLR 161

Query: 338 PMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT 396
           P    G    F +    S  + P  +A  G  +RNE +   + + R R F Q +   F T
Sbjct: 162 PETAQGIFVDFKNVMTSSRSKPPFGIANMGKSFRNEITPG-NFIFRTREFEQMEMEFFVT 220

Query: 397 KEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIK 456
                       +     Y D G +   ++    P+         +   +  K  +D   
Sbjct: 221 PGTDEEWHQYWIDARTRWYIDLGVKPENLRHYEHPK---------EKLSHYSKRTVDIEY 271

Query: 457 NSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE 516
                  + G L G            + +    D    +     +L      ++  +  E
Sbjct: 272 KFGFQGSDWGELEG------------IANRTDYDLSAHSKHSGEDLS-----YFNQATGE 314

Query: 517 KCHPVMIHRAVFGSIERFIGIMIENFK----------------GNLPLWLSPIQAIVTTI 560
           K  P +I     G     +  +++ +                   L   L+P++A V  +
Sbjct: 315 KYVPYVIE-PAAGLTRSLMCFLVDAYDVDEAPNTKGGVDKRTVLRLDPRLAPVKAAVLPL 373

Query: 561 TSSAV--EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERS 618
           +        AQ +A+ L+ +   I+ D     I  + R       P+ I        + +
Sbjct: 374 SKKPELQTVAQNLADDLRFNEWMIDYDESGA-IGRRYRRQDEIGTPLCITVDFDTLEDHA 432

Query: 619 IGIRRFGSTTTQKVSLLDA 637
           + IR   +   ++V+L   
Sbjct: 433 VTIRERDTMAQERVALDKV 451


>gi|300774783|ref|ZP_07084646.1| glycine--tRNA ligase [Chryseobacterium gleum ATCC 35910]
 gi|300506598|gb|EFK37733.1| glycine--tRNA ligase [Chryseobacterium gleum ATCC 35910]
          Length = 530

 Score = 78.7 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 60/347 (17%), Positives = 109/347 (31%), Gaps = 36/347 (10%)

Query: 308 SGHWDSYRA-NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH-GLKSYRELPVRLAEF 365
           S +W   R  N+        +  +     L+P    G    F +    S  +LP  +A+ 
Sbjct: 203 SKNWTEVRQFNLMFGTKLGASADNAMDLYLRPETAQGIFVNFLNVQKTSRHKLPFGIAQI 262

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKI 423
           G  +RNE   +   + R+R F Q +   F     E  F E  K   L        G E  
Sbjct: 263 GKAFRNEIV-ARQFIFRMREFEQMEMQFFVAPGTELEFYEQWKQKRLNWHRALGLGDENY 321

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
                 +      + A  +         L+ I + +   +          F G K ++  
Sbjct: 322 RFHDHEKLAHYANAAADIEFNFPFGFKELEGIHSRTDFDLKAHEE-----FSGRKLQFF- 375

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            D    +     +        R      +         +    +    ER +  +     
Sbjct: 376 -DPERNENYVPYVVETSVGLDRLFLSIFS-------HCLRDEVLEDGSERTVLSL----- 422

Query: 544 GNLPLWLSPIQAIVTTI--TSSAVEYAQEIANLLKS--HHLSIETDFRNETINYKIREHS 599
              P  L+PI+A +  +       EYA++I N LK   +    E D     I  + R   
Sbjct: 423 ---PPALAPIKAAILPLMKKDGLAEYAEKIFNDLKYDFNLFYEEKDA----IGKRYRRQD 475

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
               P  I       ++ ++ IR   +   ++V + + +  +  E  
Sbjct: 476 AIGTPYCITVDHDSLTDHTVTIRDRDTMQQERVPVSE-LRRIIDEKT 521


>gi|85057858|ref|YP_456774.1| uridine kinase [Aster yellows witches'-broom phytoplasma AYWB]
 gi|84789963|gb|ABC65695.1| uridine kinase [Aster yellows witches'-broom phytoplasma AYWB]
          Length = 546

 Score = 78.7 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 69/173 (39%), Gaps = 3/173 (1%)

Query: 36  KKAVAVAINGKVCDLSDPVRE--GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQ 93
           K   A  +N K+ +L+  +++    I  +      ++ +   S  +++A A   ++  + 
Sbjct: 29  KNVYAAKVNNKLKELTFKLQDPTNQIAFLGAWHAEAVNIYEASLRYLVAMASYKLFENIS 88

Query: 94  VAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESK 153
           +             F KE  F  +   QI+++M  ++ +     K+ L   KA ++++S 
Sbjct: 89  LHFTYYSSSSILASFPKEITFLPEMFQQIKEEMLLLVYQKLDITKKKLPLVKALQIYQSL 148

Query: 154 KEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGA 206
               K+ +L+       VTLY    + +      V +T  + K+       G 
Sbjct: 149 GFGDKISLLKQKNPS-FVTLYFCQNYCNYMYQGLVPNTSYLDKYNLFYHKNGF 200


>gi|160885408|ref|ZP_02066411.1| hypothetical protein BACOVA_03408 [Bacteroides ovatus ATCC 8483]
 gi|237715422|ref|ZP_04545903.1| glycyl-tRNA synthetase [Bacteroides sp. D1]
 gi|262405264|ref|ZP_06081814.1| glycyl-tRNA synthetase [Bacteroides sp. 2_1_22]
 gi|293370597|ref|ZP_06617149.1| glycine--tRNA ligase [Bacteroides ovatus SD CMC 3f]
 gi|294644763|ref|ZP_06722508.1| glycine--tRNA ligase [Bacteroides ovatus SD CC 2a]
 gi|294810581|ref|ZP_06769233.1| glycine--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
 gi|298481641|ref|ZP_06999832.1| glycine--tRNA ligase [Bacteroides sp. D22]
 gi|299147277|ref|ZP_07040342.1| glycine--tRNA ligase [Bacteroides sp. 3_1_23]
 gi|156109030|gb|EDO10775.1| hypothetical protein BACOVA_03408 [Bacteroides ovatus ATCC 8483]
 gi|229444731|gb|EEO50522.1| glycyl-tRNA synthetase [Bacteroides sp. D1]
 gi|262356139|gb|EEZ05229.1| glycyl-tRNA synthetase [Bacteroides sp. 2_1_22]
 gi|292634331|gb|EFF52868.1| glycine--tRNA ligase [Bacteroides ovatus SD CMC 3f]
 gi|292639885|gb|EFF58158.1| glycine--tRNA ligase [Bacteroides ovatus SD CC 2a]
 gi|294442242|gb|EFG11057.1| glycine--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
 gi|295086409|emb|CBK67932.1| glycyl-tRNA synthetase [Bacteroides xylanisolvens XB1A]
 gi|298272182|gb|EFI13752.1| glycine--tRNA ligase [Bacteroides sp. D22]
 gi|298514555|gb|EFI38439.1| glycine--tRNA ligase [Bacteroides sp. 3_1_23]
          Length = 513

 Score = 78.7 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 55/345 (15%), Positives = 113/345 (32%), Gaps = 54/345 (15%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T +      L+P    G    + +  K+   ++P  +A+ G  +RNE  
Sbjct: 194 FNLMFSTEMGSTSEGAMKIYLRPETAQGIFVNYLNVQKTGRMKVPFGIAQIGKAFRNEIV 253

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
            +   + R+R F Q +   F     E  + +  K   L       FG          +  
Sbjct: 254 -ARQFIFRMREFEQMEMQFFVKPGTELDWFKKWKEIRLKWHKALGFGDASYRYHDHDKLA 312

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
                    + A +I            +  +  G    EG      F+            
Sbjct: 313 HYA------NAATDI------------EFLMPFGFKEVEGIHSRTNFD------------ 342

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM--------IENFK- 543
              +        +   ++    +E   P +I  ++ G    F+ IM        +EN + 
Sbjct: 343 ---LSQHEKFSGKSIKYFDPELNESYTPYVIETSI-GVDRMFLSIMSASYCEEQLENGES 398

Query: 544 ---GNLPLWLSPIQAIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
                LP  L+P++  V  +       E A+E+ + LK  H   + D ++ +I  + R  
Sbjct: 399 RVVLKLPAALAPVKLAVMPLVKKDGLPEKAREVIDSLK-FHFHCQYDEKD-SIGKRYRRQ 456

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
                P  +    +   +  + +R   +   ++V++ +   I+  
Sbjct: 457 DAIGTPYCVTVDHQTLEDNCVTLRNRDTMQQERVAISELNNIIAD 501


>gi|328907189|gb|EGG26955.1| glycyl-tRNA synthetase [Propionibacterium sp. P08]
          Length = 504

 Score = 78.7 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 57/362 (15%), Positives = 119/362 (32%), Gaps = 29/362 (8%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           EEIN P   ++  W +         NM           +     L+P    G    F + 
Sbjct: 164 EEINCPNCGNKGQWTEPR-----DFNMMLKTYLGPVEDEAGLHYLRPETAQGIFVNFQNV 218

Query: 352 LKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
           L S  ++ P  + + G  +RNE +   + + R R F Q +   F              + 
Sbjct: 219 LTSARKKPPFGIVQTGKSFRNEITPG-NFIFRTREFEQMEMEFFVEPGTDEEWHQYWIDE 277

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
             + Y D G     ++    P+         +   +  K  +D          + G L G
Sbjct: 278 RTNWYTDLGINADNLRHYEHPK---------EKLSHYSKRTVDIEYKFGFAGSDWGELEG 328

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
                  + ++ L        +  +   D     R+  + +   +     +M       +
Sbjct: 329 IAN----RTDFDLGTHTKHSGKDLS-YFDQAQNKRYLPYVIEPAAGLTRSLMAFMVDAYT 383

Query: 531 IERFI---GIMIENFKGNLPLWLSPIQAIVTTIT--SSAVEYAQEIANLLKSHHLSIETD 585
            +      G + +     L   L+P++A V  ++  S     A+++A  L+    +++ D
Sbjct: 384 EDEAPNAKGGVDKRTVLKLDPRLAPVKAAVLPLSRNSDLSPKARDLAAQLR-QWWNVDFD 442

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
                I  + R       P  +        + ++ +R   + + ++++L      L  E 
Sbjct: 443 DAQA-IGKRYRRQDEIGTPFCVTVDFDTLDDNAVTVRDRDTMSQERIALDKVEDYLA-ER 500

Query: 646 LP 647
           LP
Sbjct: 501 LP 502


>gi|48478186|ref|YP_023892.1| glycyl-tRNA synthetase [Picrophilus torridus DSM 9790]
 gi|48430834|gb|AAT43699.1| glycyl-tRNA synthetase [Picrophilus torridus DSM 9790]
          Length = 474

 Score = 78.7 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 72/481 (14%), Positives = 153/481 (31%), Gaps = 89/481 (18%)

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWH----RKGWKIFQTLISYMRRKI-KDDYEEI 294
            +   D  ++A+    F  +    G           G  +   +I+  ++    +    I
Sbjct: 1   MNMYSDVVEIAKRRGFFWPSFSIYGGFSGLYDYGPLGVLLKDNIINKWKKAYLDEGAIFI 60

Query: 295 NTPQVLDQHLWQQSGHWDS----------------------YRANMFAVKCADDTIK--- 329
           +TP +    ++  SGH                         +       K  D+ +    
Sbjct: 61  DTPNITPGEVFDASGHLSRFSDIAAECDSCKSKFKIENVLAFNKIEIIPKSVDEALSISE 120

Query: 330 -------------------------DLRTFALKPMNCPGHVAVFNHGLKSYR-ELPVRLA 363
                                    +   F L+P    G    F      YR +LP+ +A
Sbjct: 121 KNNLKCPVCGNIIKKIYNYNLMFRLENSNFYLRPETAQGIFVNFKLLSNYYRGKLPMAVA 180

Query: 364 EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           + G  +RNE S     L+R+R F+Q +  VF   E  + + L  ++ I ++  + G E  
Sbjct: 181 QLGKGFRNEISPR-QSLIRLREFSQGEVEVFFDPENEYWKDLFDYDEI-TLKPNTGVEYK 238

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMK--GVLDTIKNSSQDRINTGVLLGEGAFYG----- 476
               +    + + + A+   A  I+K   +L+ I   + +         E A Y      
Sbjct: 239 TSIKNAFENRIIDNIAM---AYFILKTQKILNDIGFKNDNIRFRQHDPDERAHYASDSWD 295

Query: 477 --PKFE---YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
              + +     +     R         D     R +      ++    P +I    +G  
Sbjct: 296 AEARIDDDWVEIVGIANRTNYDLKNH-DAKSSERMSLKI---NNRDVIPNVIE-PSYGID 350

Query: 532 ERFIGIMIENFKGN--------LPLWLSPIQAIVTTI--TSSAVEYAQEIANLLKSHHLS 581
              + +M++++  N            ++P    V  +    + ++ + EI N++ S    
Sbjct: 351 RITLALMVQSYHKNEKGYNVLSFKPEMAPYHFAVLPLIKKENFIKKSMEIYNMIMSIDSY 410

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           +  D    +I  +         P  I    +     S+ +R   +   +++   D +  L
Sbjct: 411 VYYDETG-SIGKRYSRQDEIGTPFCITIDYETLENDSVTVRFRDTGNQERIDKKDLLDYL 469

Query: 642 T 642
           +
Sbjct: 470 S 470


>gi|19553476|ref|NP_601478.1| glycyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|62391119|ref|YP_226521.1| glycyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|145296232|ref|YP_001139053.1| glycyl-tRNA synthetase [Corynebacterium glutamicum R]
 gi|59798594|sp|Q8NNC6|SYG_CORGL RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|21325049|dbj|BAB99671.1| Glycyl-tRNA synthetase, class II [Corynebacterium glutamicum ATCC
           13032]
 gi|41326458|emb|CAF20620.1| GLYCYL-TRNA SYNTHETASE (GLYCINE--TRNA LIGASE) [Corynebacterium
           glutamicum ATCC 13032]
 gi|140846152|dbj|BAF55151.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 461

 Score = 78.7 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 55/372 (14%), Positives = 127/372 (34%), Gaps = 35/372 (9%)

Query: 277 QTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF-A 335
             L  Y  +     +  +N    ++     Q G+W   +A    +K     + D      
Sbjct: 103 HLLEQYEEKH---GHPPVNGLADINDPETGQPGNWTEPKAFSGLLKTFLGPVDDEEGLHY 159

Query: 336 LKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           L+P    G    F +    S  + P  +A  G  +RNE +   + + R R F Q +   F
Sbjct: 160 LRPETAQGIFVNFKNVMNTSRMKPPFGIANIGKSFRNEITPG-NFIFRTREFEQMEMEFF 218

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDT 454
               +         +  +  Y + G +   ++L   P++++   + +      ++   + 
Sbjct: 219 VKPGEDEEWHQHWIDTRLQWYINLGIKPENLRLYEHPQEKL---SHYSKRTVDIEYAFNF 275

Query: 455 IKNSSQD------RINTGV-LLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFN 507
                 +      R +  + +  EG+  G    +  ++   R      I+    L     
Sbjct: 276 ANTKWGELEGIANRTDYDLRVHSEGS--GEDLSFFDQETNERWIP-FVIEPAAGLGRAMM 332

Query: 508 AFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT--SSAV 565
            F ++++ E   P     +  G  +R +          L   L+P++  V  ++   +  
Sbjct: 333 MFLMDAYHEDEAP----NSKGGVDKRVV--------LKLDRRLAPVKVAVLPLSKKDTLT 380

Query: 566 EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
             A+++A  L+    +++ D     I  + R       P  +        + ++ +R   
Sbjct: 381 PLAEKLAAELREF-WNVDYDTSGA-IGRRYRRQDEIGTPFCVTVDFDSLEDNAVTVRERD 438

Query: 626 STTTQKVSLLDA 637
           +    +V L + 
Sbjct: 439 TMEQVRVPLDEL 450


>gi|262203036|ref|YP_003274244.1| glycyl-tRNA synthetase [Gordonia bronchialis DSM 43247]
 gi|262086383|gb|ACY22351.1| glycyl-tRNA synthetase [Gordonia bronchialis DSM 43247]
          Length = 463

 Score = 78.7 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 61/373 (16%), Positives = 121/373 (32%), Gaps = 27/373 (7%)

Query: 277 QTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF-A 335
             + +Y   +IK  +   N    ++     Q G W   +A    +K     + D      
Sbjct: 105 HLIENY---EIKHGHPPANGLADINDPETGQPGKWTEPKAFSGLMKTFLGPVDDEEGLHY 161

Query: 336 LKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           L+P    G    F +    + ++ P  +A+ G  +RNE +   + + R R F Q +   F
Sbjct: 162 LRPETAQGIFINFKNVMTTARKKPPFGIAQIGKSFRNEITPG-NFIFRTREFEQMEMEFF 220

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDT 454
               +         +     Y   G +   ++L   P+         D   +  K  +D 
Sbjct: 221 VKPGEDEQWHQYWIDHRFDWYVQLGIDPENLRLFEHPK---------DKLSHYSKRTVDV 271

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH 514
                      G L G       + ++ L        +  +   D     R+  F +   
Sbjct: 272 EYKFGFAGNPWGELEGVAN----RTDFDLSTHAKHSGEDLSF-FDQASGERYTPFVIEPA 326

Query: 515 SEKCHPVMIHRAVFGSIERFI---GIMIENFKGNLPLWLSPIQAIVTTIT--SSAVEYAQ 569
           +     +M       + E      G         L   L+PI+  V  ++        A+
Sbjct: 327 AGLTRSLMAFLCDAYTEEEVPNAKGGTDTRTVLKLDRRLAPIKVAVLPLSRNEKLSPKAR 386

Query: 570 EIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           ++A  L+ H  ++E D     I  + R       P  +        ++++ IR   + + 
Sbjct: 387 DLAAELRQH-WNVEFDDAQG-IGKRYRRQDEIGTPFCVTVDFDTLDDQAVTIRERDTMSQ 444

Query: 630 QKVSLLDAIPILT 642
           ++V+L      L 
Sbjct: 445 ERVALDKVAEYLA 457


>gi|218131906|ref|ZP_03460710.1| hypothetical protein BACEGG_03529 [Bacteroides eggerthii DSM 20697]
 gi|317474491|ref|ZP_07933765.1| glycyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA]
 gi|217986209|gb|EEC52548.1| hypothetical protein BACEGG_03529 [Bacteroides eggerthii DSM 20697]
 gi|316909172|gb|EFV30852.1| glycyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA]
          Length = 513

 Score = 78.7 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 56/345 (16%), Positives = 114/345 (33%), Gaps = 54/345 (15%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T +      L+P    G    + +  K+   ++P  +A+ G  +RNE  
Sbjct: 194 FNLMFTTEMGSTSEGAMKIYLRPETAQGIFVNYLNVQKTGRMKIPFGIAQIGKAFRNEIV 253

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
            +   + R+R F Q +   F     E  + +  K   L       FG +        +  
Sbjct: 254 -ARQFIFRMREFEQMEMQFFVKPGTELDWFKTWKETRLKWHKALGFGDDHYRYHDHDKLA 312

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
                    + A +I            +  +  G    EG      F+            
Sbjct: 313 HYA------NAATDI------------EFLMPFGFKEVEGIHSRTNFD------------ 342

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM--------IENFKG 544
              +        +   ++    +E   P +I  ++ G    F+ IM        +EN + 
Sbjct: 343 ---LSQHEKFSGKNIKYFDPETNESYTPYVIETSI-GVDRMFLSIMSASYCEEQLENGET 398

Query: 545 ----NLPLWLSPIQAIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
                LP  L+P++  V  +       E A+EI + LK  H   + D ++ +I  + R  
Sbjct: 399 RVVLKLPAALAPVKLAVMPLVKKDGLPEKAREIIDNLK-FHFHCQYDEKD-SIGKRYRRQ 456

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
                P  +    +   +  + +R   +   ++V++ +   I+  
Sbjct: 457 DAIGTPYCVTVDHQTLEDNCVTLRNRDTMQQERVAISELNNIIAD 501


>gi|317478512|ref|ZP_07937671.1| glycyl-tRNA synthetase [Bacteroides sp. 4_1_36]
 gi|316905326|gb|EFV27121.1| glycyl-tRNA synthetase [Bacteroides sp. 4_1_36]
          Length = 513

 Score = 78.7 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 56/345 (16%), Positives = 113/345 (32%), Gaps = 54/345 (15%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    + +  K+   ++P  +A+ G  +RNE  
Sbjct: 194 FNLMFSTEMGSTADGAMKIYLRPETAQGIFVNYLNVQKTGRMKIPFGIAQIGKAFRNEIV 253

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
            +   + R+R F Q +   F     E  + +  K   L       FG +        +  
Sbjct: 254 -ARQFIFRMREFEQMEMQFFVKPGTELDWFKTWKATRLKWHKALGFGDDHYRYHDHDKLA 312

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
                    + A +I            +  +  G    EG      F+            
Sbjct: 313 HYA------NAATDI------------EFLMPFGFKEVEGIHSRTNFD------------ 342

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM--------IENFKG 544
              +        +   ++    +E   P +I  ++ G    F+ IM        +EN + 
Sbjct: 343 ---LSQHEKFSGKNIKYFDPETNESYTPYVIETSI-GVDRMFLSIMSASYCEEKLENGET 398

Query: 545 ----NLPLWLSPIQAIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
                LP  L+P++  V  +       E A+EI + LK  H   + D ++ +I  + R  
Sbjct: 399 RVVLKLPAALAPVKLAVMPLVKKDGLPEKAREIIDNLK-FHFHCQYDEKD-SIGKRYRRQ 456

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
                P  +    +   +  + +R   +   ++V++ +   I+  
Sbjct: 457 DAIGTPYCVTVDHQTLEDNCVTLRNRDTMQQERVAISELNNIIAD 501


>gi|198275440|ref|ZP_03207971.1| hypothetical protein BACPLE_01604 [Bacteroides plebeius DSM 17135]
 gi|198271069|gb|EDY95339.1| hypothetical protein BACPLE_01604 [Bacteroides plebeius DSM 17135]
          Length = 513

 Score = 78.7 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 57/343 (16%), Positives = 115/343 (33%), Gaps = 50/343 (14%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    + +  K+   ++P  +A+ G  +RNE  
Sbjct: 194 FNLMFTTEMGSTADGAMKVYLRPETAQGIFVNYLNVQKTGRMKIPFGIAQIGKAFRNEIV 253

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
            +   + R+R F Q +   F       +   K   + +  +K  GF     +     +  
Sbjct: 254 -ARQFIFRMREFEQMEMQFFVKPGTELDWFKKWKEIRLKWHKALGFGDDHYRYHDHEKLA 312

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
             ++A  D                 +  +  G    EG      F+              
Sbjct: 313 HYANAATDI----------------EFLMPFGFKEVEGIHSRTNFD-------------- 342

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM--------IENFKG-- 544
            +        +   ++    +E   P +I  ++ G    F+ +M        +EN +   
Sbjct: 343 -LSQHEKFSGKSIKYFDPEINESYTPYVIETSI-GVDRMFLSVMSAAYHEEKLENGETRV 400

Query: 545 --NLPLWLSPIQAIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              LP  L+P++  V  +       E A+EI N LK  H + + D ++ +I  + R    
Sbjct: 401 VLKLPAALAPVKLAVMPLVKKDGLPEKAREIVNDLK-FHFNCQYDEKD-SIGKRYRRQDA 458

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              P  I    +   +  + +R   +   ++V++ D   I+  
Sbjct: 459 IGTPYCITIDHQTLEDNCVTLRNRDTMEQERVAIADLNNIIAD 501


>gi|282860361|ref|ZP_06269429.1| glycine--tRNA ligase [Prevotella bivia JCVIHMP010]
 gi|282586859|gb|EFB92096.1| glycine--tRNA ligase [Prevotella bivia JCVIHMP010]
          Length = 517

 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 58/345 (16%), Positives = 111/345 (32%), Gaps = 54/345 (15%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T    +   L+P    G    F +  K+   +LP  +A+ G  +RNE  
Sbjct: 194 FNLMFSTEMGSTADGSQKIYLRPETAQGIFVNFLNVQKTGRMKLPFGIAQIGKAFRNEIV 253

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
            +   + R+R F Q +   FC    E  + E  K H L        G +        +  
Sbjct: 254 -ARQFVFRMREFEQMEMQFFCQPGTEMKWFEYWKAHRLAWHEGLGMGDDNYRFHDHDKLA 312

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
                    + A +I            +  +  G    EG      F+      +G+  +
Sbjct: 313 HYA------NAATDI------------EFHLPFGFKEIEGIHSRTDFD------LGQHEK 348

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNL------ 546
               Q+ +  P R         +E   P ++  ++ G    F+ +M   ++         
Sbjct: 349 FSGRQIKYFDPDR---------NENYTPYVVETSI-GVDRMFLTVMCHAYQEEQLENGSS 398

Query: 547 --------PLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
                   PL       +         E AQEI N LK  H +   + ++ +I  + R  
Sbjct: 399 RVVLKLPEPLAPIKCAVLPLVNKDGLPEKAQEIVNDLK-FHFTTHIEAKD-SIGKRYRRQ 456

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
                P  +       ++ ++ +R   +   ++V +     I+  
Sbjct: 457 DAIGTPFCVTVDGDTLTDGTVTLRYRDTMEQERVPIDKLREIIED 501


>gi|296121907|ref|YP_003629685.1| glycyl-tRNA synthetase [Planctomyces limnophilus DSM 3776]
 gi|296014247|gb|ADG67486.1| glycyl-tRNA synthetase [Planctomyces limnophilus DSM 3776]
          Length = 551

 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 54/356 (15%), Positives = 100/356 (28%), Gaps = 42/356 (11%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR-ELPVRLAEFGSVYRNEPS 374
            N+           +     L+P    G    F +   S R ++P  +A+ G  +RNE +
Sbjct: 207 FNLMFKTTLGALGTEDDAAFLRPETAQGMFVNFKNVCDSSRVKIPFGIAQIGKSFRNEIT 266

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              +   R R F Q +   FC  +          +     Y D G        S     R
Sbjct: 267 PR-NFTFRSREFEQMEMEFFCHPKDSLAWYTYWRDRRYKWYTDLGI------SSDNLILR 319

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAI------- 487
             +    + A   +                 G L G       + ++ L+          
Sbjct: 320 EHTHE--ELAHYSVGTADVEYAFPFLPAGEYGELEGVAH----RGDFDLRSHSQGKLRKE 373

Query: 488 -----------GRDWQCGT----IQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
                      G+    G+       D     RF    +   +      +         +
Sbjct: 374 GNELVVEAGTDGKPKYLGSGKDLSYFDDQSRERFLPHVIEPAAGCDRATLAFLCEAYHED 433

Query: 533 RFI---GIMIENFKGNLPLWLSPIQAIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFR 587
           +     G M E     L   L+P++  +  +       E A EI    K   ++   D +
Sbjct: 434 KQPDEKGEMQERVVLKLHPRLAPVKVAIFPLIKKDGMPEKAAEIYREFKRAGITAAYDQQ 493

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              I  + R       P  I       S  ++ IR   +    ++ + + +  + K
Sbjct: 494 AA-IGRRYRRMDEIGTPYCITVDGDTMSADTVTIRNRDTLEQIRLPVKEVVDHIAK 548


>gi|227546856|ref|ZP_03976905.1| glycine--tRNA ligase [Bifidobacterium longum subsp. infantis ATCC
           55813]
 gi|239620833|ref|ZP_04663864.1| glycyl-tRNA synthetase [Bifidobacterium longum subsp. infantis CCUG
           52486]
 gi|312132438|ref|YP_003999777.1| glyrs [Bifidobacterium longum subsp. longum BBMN68]
 gi|317481588|ref|ZP_07940624.1| glycyl-tRNA synthetase [Bifidobacterium sp. 12_1_47BFAA]
 gi|322689557|ref|YP_004209291.1| glycyl-tRNA synthase [Bifidobacterium longum subsp. infantis 157F]
 gi|322691518|ref|YP_004221088.1| glycyl-tRNA synthase [Bifidobacterium longum subsp. longum JCM
           1217]
 gi|227212818|gb|EEI80699.1| glycine--tRNA ligase [Bifidobacterium longum subsp. infantis ATCC
           55813]
 gi|239516409|gb|EEQ56276.1| glycyl-tRNA synthetase [Bifidobacterium longum subsp. infantis CCUG
           52486]
 gi|311773043|gb|ADQ02531.1| GlyRS [Bifidobacterium longum subsp. longum BBMN68]
 gi|316916948|gb|EFV38334.1| glycyl-tRNA synthetase [Bifidobacterium sp. 12_1_47BFAA]
 gi|320456374|dbj|BAJ66996.1| glycyl-tRNA synthase [Bifidobacterium longum subsp. longum JCM
           1217]
 gi|320460893|dbj|BAJ71513.1| glycyl-tRNA synthase [Bifidobacterium longum subsp. infantis 157F]
          Length = 490

 Score = 78.3 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 58/379 (15%), Positives = 113/379 (29%), Gaps = 48/379 (12%)

Query: 278 TLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALK 337
            L      K  D   E     ++  +   +    +    NM           +     L+
Sbjct: 102 KLEESYAEKHGDKMPENGMKDIVCPNCGTRGQWTEPRDFNMMLRTHLGPVEDENSLHYLR 161

Query: 338 PMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT 396
           P    G    F +    S    P  +A  G  +RNE +   + + R R F Q +   F T
Sbjct: 162 PETAQGIFVDFKNVMTSSRSRPPFGIANMGKSFRNEITPG-NFIFRTREFEQMEMEFFVT 220

Query: 397 KEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIK 456
                       +     Y D G +   ++    P+         +   +  K  +D   
Sbjct: 221 PGTDEEWHQYWIDARTRWYIDLGVKPENLRHYEHPK---------EKLSHYSKRTVDIEY 271

Query: 457 NSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE 516
                  + G L G            + +    D    +     +L      ++  +  E
Sbjct: 272 KFGFQGSDWGELEG------------IANRTDYDLSAHSKHSGEDLS-----YFNQATGE 314

Query: 517 KCHPVMIHRAVFGSIERFIGIMIENFK----------------GNLPLWLSPIQAIVTTI 560
           K  P +I     G     +  +++ +                   L   L+P++A V  +
Sbjct: 315 KYVPYVIE-PAAGLTRSLMCFLVDAYDVDEAPNTKGGVDKRTVLRLDPRLAPVKAAVLPL 373

Query: 561 TSSAV--EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERS 618
           +        AQ +A+ L+ +   I+ D     I  + R       P+ I        + +
Sbjct: 374 SKKPELQTVAQNLADDLRFNEWMIDYDESGA-IGRRYRRQDEIGTPLCITVDFDTLEDHA 432

Query: 619 IGIRRFGSTTTQKVSLLDA 637
           + IR   +   ++V+L   
Sbjct: 433 VTIRERDTMAQERVALDKV 451


>gi|332881107|ref|ZP_08448775.1| glycine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str. F0087]
 gi|332681019|gb|EGJ53948.1| glycine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str. F0087]
          Length = 516

 Score = 78.3 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 60/406 (14%), Positives = 128/406 (31%), Gaps = 56/406 (13%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
                   V+ + ++G +I   L   +  +   D  +    ++        S +W   + 
Sbjct: 136 QFVSTNPKVLEYKQRGEEILHRLGKSLENEDLAD-VKALIEELEIADPETGSRNWTDVKQ 194

Query: 317 -NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        +        L+P    G    F +  KS   ++P  +A+ G  +RNE  
Sbjct: 195 FNLMFGTKIGASADATMDLYLRPETAQGIFVNFLNVQKSGRMKIPFGIAQTGKAFRNEIV 254

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
            +   + R+R F Q +   F     +Q + E  K   L   +    G E        +  
Sbjct: 255 -ARQFIFRMREFEQMEMQFFIKPGTQQQWYEYWKETRLKWHLSLGMGEENYRYHPHEKLA 313

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
                               D      + R   G    EG      F+          + 
Sbjct: 314 HYAD-------------AACDI-----EFRFPFGFKELEGIHSRTNFDL----GNHEKYS 351

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI-----ENFKG--- 544
              +Q                 ++   P ++  ++ G    F+ ++      E  +G   
Sbjct: 352 GKKMQYFD-----------PEDNQSFTPYVLETSI-GLDRMFLAVLSNSLQEETLEGGDT 399

Query: 545 ----NLPLWLSPIQAIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
                LP  L+P +  V  +       E A++I N LK +  ++  D ++  +  + R  
Sbjct: 400 RTVLRLPFVLAPTKVAVLPLLKKDGLPEVAEQIVNELK-YDFNVAYDEKDA-VGRRYRRQ 457

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
                P  +    +   + ++ +R   +    ++++ +    + KE
Sbjct: 458 DAVGTPFCVTVDHQTLEDNTVTLRHRDTMEQVRIAIPELRAAIAKE 503


>gi|297571270|ref|YP_003697044.1| glycyl-tRNA synthetase [Arcanobacterium haemolyticum DSM 20595]
 gi|296931617|gb|ADH92425.1| glycyl-tRNA synthetase [Arcanobacterium haemolyticum DSM 20595]
          Length = 464

 Score = 78.3 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 55/387 (14%), Positives = 124/387 (32%), Gaps = 58/387 (14%)

Query: 279 LISYMRRKIKDD----YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           +  Y  +K   +      ++  P    +  W +S  +                  +    
Sbjct: 107 IEQYAEKKGVAESEVSMSDVACPNCGTRGQWTESKPFSG-----LLKTFLGPVDNEEGLH 161

Query: 335 ALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
            L+P    G    F + + +  ++ P  + + G  +RNE +   + + R R F Q +   
Sbjct: 162 YLRPETAQGIFVNFLNVVTAARKKPPFGIGQVGKSFRNEITPG-NFIFRTREFEQMEIEF 220

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
           F    +         +  ++ Y+D G  +  ++L   P+         +   +  K  +D
Sbjct: 221 FVKPGEDEEWHQSWIDARLAWYEDLGVSRENLRLYEHPK---------EKLSHYSKRTVD 271

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS 513
                       G L G       + ++ L  +   +     ++               +
Sbjct: 272 IEYRFGFQGSEWGELEGIAN----RTDFDL--SSHSEASGKKLEYFDQ-----------A 314

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIMIE--------NFKG--------NLPLWLSPIQAIV 557
             E+  P ++     G     +  + E        N KG         L   L+P++  V
Sbjct: 315 TGERYTPYVVE-PSAGLTRSLMAFLTEAYTEDEAPNTKGGVDKRIVLKLDPRLAPVKVAV 373

Query: 558 TTITSSAV--EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEAS 615
             ++ SA     A+E+A  L+ H  +++ D     +  + R       P  +        
Sbjct: 374 LPLSRSADLSPMARELAAKLRKH-WNVDFDDAGA-VGRRYRRQDEIGTPFCVTVDFDSLE 431

Query: 616 ERSIGIRRFGSTTTQKVSLLDAIPILT 642
           ++++ IR   +    ++ L +    L 
Sbjct: 432 DQAVTIRDRDTMEQVRIPLAEVEAYLA 458


>gi|111018230|ref|YP_701202.1| glycyl-tRNA synthetase [Rhodococcus jostii RHA1]
 gi|110817760|gb|ABG93044.1| glycine--tRNA ligase [Rhodococcus jostii RHA1]
          Length = 463

 Score = 78.3 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 56/351 (15%), Positives = 113/351 (32%), Gaps = 57/351 (16%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPS 374
            NM           +     L+P    G    F + L  S ++ P  + + G  +RNE +
Sbjct: 142 FNMMLKTYLGPVESEEGMHYLRPETAQGIFVNFANVLTTSRKKPPFGIGQIGKSFRNEIT 201

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              + + R R F Q +   F    +         +  +  Y   G  K  ++        
Sbjct: 202 PG-NFIFRTREFEQMEMEFFVKPGEDEEWHQYWIDYRMDWYTGLGINKDNLR-------- 252

Query: 435 VGSDALWDDAENIM----KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRD 490
                L++ A++ +    K  +D            G L G       + ++ L       
Sbjct: 253 -----LYEHAQDKLSHYSKRTVDIEYRFHFQGSEWGELEGVAN----RTDFDLSTHSKHS 303

Query: 491 WQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW- 549
                   D N       +Y  +  E+  P +I     G     +  +++ +  +     
Sbjct: 304 GT------DLN-------YYDQATGERYTPYVIE-PAAGLTRSLMAFLVDAYTEDEAPNA 349

Query: 550 ---------------LSPIQAIVTTITSSAV--EYAQEIANLLKSHHLSIETDFRNETIN 592
                          L+P++A V  ++ +A     A+++A  L+ H  ++E D     I 
Sbjct: 350 KGGVDKRTVLRLDRRLAPVKAAVLPLSRNADLTPKAKDLAATLRQH-WNVEFDDAGA-IG 407

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            + R       P  I        + ++ +R   S   ++V+L      L +
Sbjct: 408 RRYRRQDEIGTPFCITVDFDTLEDHAVTVRERDSMAQERVALDQVEGYLAQ 458


>gi|327403982|ref|YP_004344820.1| glycyl-tRNA synthetase [Fluviicola taffensis DSM 16823]
 gi|327319490|gb|AEA43982.1| glycyl-tRNA synthetase [Fluviicola taffensis DSM 16823]
          Length = 512

 Score = 78.3 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 66/428 (15%), Positives = 141/428 (32%), Gaps = 44/428 (10%)

Query: 228 QQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI 287
           ++ + +    + +  ++  +K A   D          V    R   KI + +   MR  +
Sbjct: 107 EEHMEKIRQKINKEVEKASKKFAEAFDEAQFRATNPNV---LRNAEKI-KEIEDRMRTTL 162

Query: 288 KDDYEEINTPQVLDQH---LWQQSGHWDSYRA-NMFAVKCADDTIKDLRTFALKPMNCPG 343
           +++  E     + D         S +W   R  N+           D  T  L+P    G
Sbjct: 163 ENNDLEGVKTLIEDLEIVCPISGSRNWTEVRQFNLMFSTELGSVAGDASTIYLRPETAQG 222

Query: 344 HVAVFNHGLKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK--EQM 400
               F +  KS   ++P  +A+ G  +RNE   +   + R+R F Q +   F     E  
Sbjct: 223 IFVNFLNVQKSGRMKIPFGIAQIGKAFRNEIV-ARQFIFRMREFEQMEMQFFVRPGDEMK 281

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQ 460
           +    K   L        G +        +      + +  +    +    L+ I + + 
Sbjct: 282 WYNHWKAARLAWHKALGLGDKYYREHDHIKLAHYANAASDIEFDFPMGFKELEGIHSRTD 341

Query: 461 DRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC---GTIQVDFNLPSRFNAFYVNSHSEK 517
             +          F G K +Y   +            ++ +D    +  +A + N   E 
Sbjct: 342 FDLKQHEQ-----FSGKKLQYFDPELNQNYVPYVVETSVGLDRMFLAVMSASFKNEKLED 396

Query: 518 CHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAV--EYAQEIANLL 575
                         ER +  +        P  L+P +  +  +T      E A EI N L
Sbjct: 397 G------------SERAVLSL--------PAQLAPYKVAIMPLTKKDGLPEKATEILNDL 436

Query: 576 KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
           +    + + D ++ +   + R       P  ++   +   + ++ IR   +   ++V++ 
Sbjct: 437 R-FDFNCQYDEKD-SPGKRYRRQDAIGTPYCVMVDHQTLEDNTVTIRDRDTMLQERVAIS 494

Query: 636 DAIPILTK 643
           +    + +
Sbjct: 495 ELRAKIDE 502


>gi|167764216|ref|ZP_02436343.1| hypothetical protein BACSTE_02601 [Bacteroides stercoris ATCC
           43183]
 gi|167698332|gb|EDS14911.1| hypothetical protein BACSTE_02601 [Bacteroides stercoris ATCC
           43183]
          Length = 513

 Score = 78.3 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 57/345 (16%), Positives = 114/345 (33%), Gaps = 54/345 (15%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T +      L+P    G    + +  K+   ++P  +A+ G  +RNE  
Sbjct: 194 FNLMFTTEMGSTSEGAMKVYLRPETAQGIFVNYLNVQKTGRMKIPFGIAQIGKAFRNEIV 253

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
            +   + R+R F Q +   F     E  + +  K   L       FG +        +  
Sbjct: 254 -ARQFIFRMREFEQMEMQFFVKPGTELDWFKTWKETRLKWHKALGFGDDHYRYHDHDKLA 312

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
                    + A +I            +  +  G    EG      F+            
Sbjct: 313 HYA------NAATDI------------EFLMPFGFKEVEGIHSRTNFD------------ 342

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM--------IENFKG 544
              +        +   ++    +E   P +I  ++ G    F+ IM        +EN + 
Sbjct: 343 ---LSQHEKFSGKNIKYFDPETNESYTPYVIETSI-GVDRMFLSIMSASYCEEQLENGET 398

Query: 545 ----NLPLWLSPIQAIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
                LP  L+P++  V  +       E A+EI N LK  H   + D ++ +I  + R  
Sbjct: 399 RVVLKLPAALAPVKLAVMPLVKKDGLPEKAREIINDLK-FHFHCQYDEKD-SIGKRYRRQ 456

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
                P  +    +   +  + +R   +   ++V++ +   I+  
Sbjct: 457 DAIGTPYCVTVDHQTLEDNCVTLRNRDTMQQERVAISELNNIIAD 501


>gi|220929210|ref|YP_002506119.1| glycyl-tRNA synthetase [Clostridium cellulolyticum H10]
 gi|254781875|sp|B8I2Z6|SYG_CLOCE RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|219999538|gb|ACL76139.1| glycyl-tRNA synthetase [Clostridium cellulolyticum H10]
          Length = 462

 Score = 78.3 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 44/342 (12%), Positives = 99/342 (28%), Gaps = 46/342 (13%)

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEP 373
           + N+        T        L+P    G    F +  ++  R++P  + + G  +RNE 
Sbjct: 150 KFNLMFKTFQGVTEDSKSEIYLRPETAQGIFVNFKNVQRTTRRKIPFGIGQIGKSFRNEI 209

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
           +   +   R R F Q +   FC   +               +KDF +  ++     +   
Sbjct: 210 TPG-NFTFRTREFEQMELEFFCEPGKDLEW--------FKYWKDFCYNWLLSLNMKKENL 260

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
           ++      + +                     G+          + ++ LK         
Sbjct: 261 KLRDHEKEELSHYSNATTDIEFLFPFGWGELWGIAD--------RTDFDLK--------- 303

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK---------- 543
                     S+ +  Y +  + + +         G+    +  + E +           
Sbjct: 304 -----QHMTHSKDDLSYFDPTTNEKYVPYCIEPSLGADRVTLAFLCEAYDEEEVAEGDVR 358

Query: 544 --GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
                   L+P++  V  ++    E A ++  +L       E D    +I  + R     
Sbjct: 359 TVLRFHPALAPVKIAVLPLSKKLGEDADKVYQMLAKS-YYCEYDETG-SIGKRYRRQDEI 416

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             P  I        ++S+ IR   +    ++ + D       
Sbjct: 417 GTPYCITFDFDSLEDKSVTIRDRDTMQQVRIKIEDLAAYFEN 458


>gi|74006038|ref|XP_858867.1| PREDICTED: similar to glutamyl-prolyl tRNA synthetase isoform 3
            [Canis familiaris]
          Length = 1183

 Score = 78.3 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 69/179 (38%), Gaps = 6/179 (3%)

Query: 226  NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
              +Q         EE+    + ++  + ++     D SG        + I++++  +   
Sbjct: 1005 PKKQTRLGLEAKKEENLADWYSQVITKSEMIEY-YDVSGCYILRPWAYSIWESIKDFFDA 1063

Query: 286  KIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPG 343
            +IK    E    P  + Q   + +  H   +   +  V  +  T       A++P +   
Sbjct: 1064 EIKKLGVENCYFPMFVSQGALEKEKTHVADFAPEVAWVTRSGKTEL-AEPIAVRPTSETV 1122

Query: 344  HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMF 401
                +   ++S+R+LP+RL ++ +V R E        +R R F   + H  F T E+  
Sbjct: 1123 MYPAYAKWVQSHRDLPIRLNQWCNVVRWEFKHP-QPFLRTREFLWQEGHSAFATFEEAA 1180


>gi|23464742|ref|NP_695345.1| glycyl-tRNA synthetase [Bifidobacterium longum NCC2705]
 gi|59798592|sp|Q8G7W9|SYG_BIFLO RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|23325311|gb|AAN23981.1| glycyl-tRNA synthetase [Bifidobacterium longum NCC2705]
          Length = 490

 Score = 78.3 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 60/380 (15%), Positives = 113/380 (29%), Gaps = 50/380 (13%)

Query: 278 TLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDS-YRANMFAVKCADDTIKDLRTFAL 336
            L      K  D   E     ++  +     G W      NM           +     L
Sbjct: 102 KLEESYAEKHGDKMPENGMKDIVCPNC-GIRGQWTEPRDFNMMLRTHLGPVEDENSLHYL 160

Query: 337 KPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC 395
           +P    G    F +    S    P  +A  G  +RNE +   + + R R F Q +   F 
Sbjct: 161 RPETAQGIFVDFKNVMTSSRSRPPFGIANMGKSFRNEITPG-NFIFRTREFEQMEMEFFV 219

Query: 396 TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTI 455
           T            +     Y D G +   ++    P+         +   +  K  +D  
Sbjct: 220 TPGTDEEWHQYWIDARTRWYIDLGVKPENLRHYEHPK---------EKLSHYSKRTVDIE 270

Query: 456 KNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS 515
                   + G L G            + +    D    +     +L      ++  +  
Sbjct: 271 YKFGFQGSDWGELEG------------IANRTDYDLSAHSKHSGEDLS-----YFNQATG 313

Query: 516 EKCHPVMIHRAVFGSIERFIGIMIENFK----------------GNLPLWLSPIQAIVTT 559
           EK  P +I     G     +  +++ +                   L   L+P++A V  
Sbjct: 314 EKYVPYVIE-PAAGLTRSLMCFLVDAYDVDEAPNTKGGVDKRTVLRLDPRLAPVKAAVLP 372

Query: 560 ITSSAV--EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASER 617
           ++        AQ +A+ L+ +   I+ D     I  + R       P+ I        + 
Sbjct: 373 LSKKPELQTVAQNLADDLRFNEWMIDYDESGA-IGRRYRRQDEIGTPLCITVDFDTLEDH 431

Query: 618 SIGIRRFGSTTTQKVSLLDA 637
           ++ IR   +   ++V+L   
Sbjct: 432 AVTIRERDTMAQERVALDKV 451


>gi|332520154|ref|ZP_08396618.1| glycyl-tRNA synthetase [Lacinutrix algicola 5H-3-7-4]
 gi|332044713|gb|EGI80907.1| glycyl-tRNA synthetase [Lacinutrix algicola 5H-3-7-4]
          Length = 523

 Score = 78.3 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 53/353 (15%), Positives = 112/353 (31%), Gaps = 51/353 (14%)

Query: 308 SGHWDSYRA-NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEF 365
           S +W   +  N+        + +      L+P    G    F +  K+   ++P  +A+ 
Sbjct: 195 SRNWTDVKQFNLMFGTKLGASAESAMDLYLRPETAQGIFVNFLNVQKTGRMKIPFGIAQT 254

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
           G  +RNE   +   + R+R F Q +   F                 +  +   G      
Sbjct: 255 GKAFRNEIV-ARQFIFRMREFEQMEMQFFIKPGTQGEWYEHWKETRMKWHLSLGMGAENY 313

Query: 426 KLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKD 485
           +     +    +DA  D                 + +   G    EG     + ++ LK 
Sbjct: 314 RFHDHEKLAHYADAAADI----------------EFKFPFGFKELEGIH--SRTDFDLK- 354

Query: 486 AIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI----MIEN 541
               +     +Q              +  +    P ++  ++ G    F+ +    ++E 
Sbjct: 355 -AHEEHSGKKLQYFD-----------HEDNASYTPYVLETSI-GLDRMFLAVFSNALVEE 401

Query: 542 --------FKGNLPLWLSPIQAIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
                       LP  L+P +A +  +       + A++I   LK    ++  D ++  +
Sbjct: 402 ELENNTTRTVLKLPAVLAPFKAAILPLVKKDGLPDVAKKIVEDLK-WDFNVTYDEKDA-V 459

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
             + R       P  I        + ++ IR   +    +V + D   I+ KE
Sbjct: 460 GRRYRRQDANGTPFCITVDHDTLEDNTVTIRHRDTMEQSRVKIEDLKSIIKKE 512


>gi|15896443|ref|NP_349792.1| glycyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|59798597|sp|Q97EB8|SYG_CLOAB RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|15026266|gb|AAK81132.1|AE007815_2 Glycyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|325510601|gb|ADZ22237.1| glycyl-tRNA synthetase [Clostridium acetobutylicum EA 2018]
          Length = 462

 Score = 78.3 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 57/333 (17%), Positives = 104/333 (31%), Gaps = 46/333 (13%)

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEP 373
           + N+        T        L+P    G    F +  +S  +++P  + + G  +RNE 
Sbjct: 151 KFNLMFKTFQGVTEDASSEIYLRPETAQGIFVNFKNVQRSSRKKVPFGIGQIGKAFRNEI 210

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
           +   +   R R F Q +   FC             +   S   D G  K  ++      +
Sbjct: 211 TPG-NFTFRTREFEQMELEFFCKPGTDLEWFKYWKDYCWSFLLDLGINKENLRFRDHSAE 269

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
            +     +  A +                I      G G  +G       +         
Sbjct: 270 EL---VFYSKATS---------------DIEYKFPFGWGELWG----VADRTDYDLKKHM 307

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI------ENFKGNLP 547
                D N           S +EK  P +I     G+    +  +I      E   G+  
Sbjct: 308 DHSGEDMNYLD-------PSTNEKYVPYVIE-PSLGADRVALAFLIDAYDEEELEGGDQR 359

Query: 548 LWL------SPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
           + L      +PI+A V  ++    E A ++ + + S   +IE D    +I  + R     
Sbjct: 360 IVLHFHPQIAPIKAAVLPLSKKLSEKALDVYSKISSK-FNIEYDETG-SIGKRYRRQDEI 417

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
             P  I        + ++ IR   S +  +V +
Sbjct: 418 GTPYCITVDFDTLEDEAVTIRDRDSMSQVRVKI 450


>gi|323127929|gb|ADX25226.1| seryl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis ATCC 12394]
          Length = 425

 Score = 78.3 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 43/243 (17%), Positives = 93/243 (38%), Gaps = 21/243 (8%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIF 276
           G       E+ ++    +   E + H  L  ++D+          G+  +F+   G ++ 
Sbjct: 115 GADEEDNVEIRRWGTPRDFDFEVKAHWDLGEDLDILDWERGAKVTGARFLFYKNLGARLE 174

Query: 277 QTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFA 335
           + L ++M    IK+ Y+EI TP +++      +G +  ++ + F +   +        F 
Sbjct: 175 RALYNFMLDEHIKEGYQEIITPYMVNHDSMFGTGQYPKFKEDTFELSDTN--------FV 226

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAH 392
           L P         +   +   +ELP+        +R+E   +     GL+R+  F + +  
Sbjct: 227 LIPTAEVPLTNYYRGEILDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMV 286

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIM 448
            F   E+ + E  K+     +I +  G    ++ L T              +W  A+N  
Sbjct: 287 KFAKPEKSYQELEKMTANAENILQKLGLPYRVIALCTGDMGFSAAKTYDLEVWIPAQNTY 346

Query: 449 KGV 451
           + +
Sbjct: 347 REI 349


>gi|89100799|ref|ZP_01173652.1| histidyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
 gi|89084502|gb|EAR63650.1| histidyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
          Length = 424

 Score = 78.3 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 64/412 (15%), Positives = 126/412 (30%), Gaps = 55/412 (13%)

Query: 276 FQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           +Q +    R       Y+EI TP        +          ++   +      +  R+ 
Sbjct: 20  WQYIEGKARELCSRFQYQEIRTPIF---EHTELFLRGVGDTTDIVQKEMYTFEDRGGRSL 76

Query: 335 ALKPM-NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
            L+P    P   +   + +      PV+L   G ++R E   +     R R F Q     
Sbjct: 77  TLRPEGTAPTVRSFVENKMHGNANQPVKLYYTGPMFRYERPQA----GRFRQFVQFGVEA 132

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFG----------------FEKIMVKLSTRPEKRVGS 437
             + +   +   ++  L +SIY + G                       L    + R+G 
Sbjct: 133 LGSSDPAIDA--EVIALAMSIYTELGLKKLKLVINSLGDKESRNSHREALIAHFKPRIGE 190

Query: 438 --DALWDDAENIMKGVLDTIKNSSQD------RINTGVLLGEGAFY--------GPKFEY 481
                 +  E     +LD  K+   +       I   +      ++            ++
Sbjct: 191 FCSDCQNRLEKNPMRILDCKKDREHELMQTAPSILDFLNEDSKKYFEKVQQYLADVSIDF 250

Query: 482 ILKDAI--GRDWQCGTIQVDFNLPSRFNAF--------YVNSHSEKCHPVMIHRAVFGSI 531
            +   +  G D+   T     +    F A         Y     E   P         SI
Sbjct: 251 TVDPNLVRGLDYYNHTAFEIMSDAEGFGAITTLCGGGRYNGLTEEIGGPEAPGIGFAFSI 310

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           ERF+  +    +G        I   +  +   A +Y+  + + L+   +S E D+ +  I
Sbjct: 311 ERFLSAL--EAEGIKLPVNEGIDCYLVALGEEAKDYSVGLLHKLRMAGISAERDYLDRKI 368

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             + +         + + G+ E     I ++   +    +VSL   I  L +
Sbjct: 369 KTQFKAADRMNAKYVAVLGEDELKAGKINVKSMETGDQTEVSLDSFIDQLKE 420


>gi|322412582|gb|EFY03490.1| seryl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           dysgalactiae ATCC 27957]
          Length = 425

 Score = 78.3 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 43/243 (17%), Positives = 93/243 (38%), Gaps = 21/243 (8%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIF 276
           G       E+ ++    +   E + H  L  ++D+          G+  +F+   G ++ 
Sbjct: 115 GADEEDNVEIRRWGTPRDFDFEVKAHWDLGEDLDILDWERGAKVTGARFLFYKNLGARLE 174

Query: 277 QTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFA 335
           + L ++M    IK+ Y+EI TP +++      +G +  ++ + F +   +        F 
Sbjct: 175 RALYNFMLDEHIKEGYQEIITPYMVNHDSMFGTGQYPKFKEDTFELSDTN--------FV 226

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAH 392
           L P         +   +   +ELP+        +R+E   +     GL+R+  F + +  
Sbjct: 227 LIPTAEVPLTNYYRGEILDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMV 286

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIM 448
            F   E+ + E  K+     +I +  G    ++ L T              +W  A+N  
Sbjct: 287 KFAKPEKSYQELEKMTANAENILQKLGLPYRVIALCTGDMGFSAAKTYDLEVWIPAQNTY 346

Query: 449 KGV 451
           + +
Sbjct: 347 REI 349


>gi|94991059|ref|YP_599159.1| seryl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
 gi|166223297|sp|Q1JFE4|SYS_STRPD RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|94544567|gb|ABF34615.1| Seryl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
          Length = 425

 Score = 78.3 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 43/243 (17%), Positives = 93/243 (38%), Gaps = 21/243 (8%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIF 276
           G       E+ ++    +   E + H  L  ++D+          G+  +F+   G ++ 
Sbjct: 115 GADEEDNVEIRRWGTPRDFDFEVKAHWNLGEDLDILDWERGAKVTGARFLFYKNLGARLE 174

Query: 277 QTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFA 335
           + L ++M    IK+ Y+EI TP +++      +G +  ++ + F +   +        F 
Sbjct: 175 RALYNFMLDEHIKEGYQEIITPYMVNHDSMFGTGQYPKFKEDTFELADTN--------FV 226

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAH 392
           L P         +   +   +ELP+        +R+E   +     GL+R+  F + +  
Sbjct: 227 LIPTAEVPLTNYYRGEILDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMV 286

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIM 448
            F   E+ + E  K+     +I +  G    ++ L T              +W  A+N  
Sbjct: 287 KFAKPEESYQELEKMTANAENILQKLGLPYRVISLCTGDMGFSAAKTYDLEVWIPAQNTY 346

Query: 449 KGV 451
           + +
Sbjct: 347 REI 349


>gi|188994073|ref|YP_001928325.1| glycyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277]
 gi|188593753|dbj|BAG32728.1| glycyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277]
          Length = 515

 Score = 78.3 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 53/345 (15%), Positives = 109/345 (31%), Gaps = 54/345 (15%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    F +  K+   ++P  + + G  +RNE  
Sbjct: 195 FNLMFATEMGSTADGAMKVYLRPETAQGIFVNFLNVQKTGRMKIPFGICQIGKAFRNEIV 254

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
            +   + R+R F Q +   F     E  + E  K   +       FG +K       +  
Sbjct: 255 -ARQFIFRMREFEQMEMQFFVRPGEELQWFEKWKNLRMQWHRALGFGDDKYRFHDHDKLA 313

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
                    + A +I            +  +  G    EG      F+     +   ++ 
Sbjct: 314 HYA------NAATDI------------EFEMPFGFKEVEGIHSRTDFDL----SRHEEFS 351

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI------ENFKGNL 546
              +Q              +    K +   +     G    F+ I+       E   G +
Sbjct: 352 GKKLQYF------------DPEQNKSYVPYVVETSIGLDRMFLTILFGSYCEEETSNGEM 399

Query: 547 ------PLWLSPIQAIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
                 P  L+P++  V  +         A+EI + L+    + + D ++ +I  + R  
Sbjct: 400 RVVLKLPAALAPVKLAVLPLVRKDGLDAKAREIVHDLR-FDFACQYDEKD-SIGKRYRRQ 457

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
                P  I    +   + ++ IR   +   ++V +     I+++
Sbjct: 458 DAIGTPFCITVDHQSLEDNTVTIRYRDTMEQERVEISRLNAIISE 502


>gi|34541737|ref|NP_906216.1| glycyl-tRNA synthetase [Porphyromonas gingivalis W83]
 gi|34398055|gb|AAQ67115.1| glycyl-tRNA synthetase [Porphyromonas gingivalis W83]
          Length = 515

 Score = 78.3 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 53/345 (15%), Positives = 109/345 (31%), Gaps = 54/345 (15%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    F +  K+   ++P  + + G  +RNE  
Sbjct: 195 FNLMFATEMGSTADGAMKVYLRPETAQGIFVNFLNVQKTGRMKIPFGICQIGKAFRNEIV 254

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
            +   + R+R F Q +   F     E  + E  K   +       FG +K       +  
Sbjct: 255 -ARQFIFRMREFEQMEMQFFVRPGEELQWFEKWKNLRMQWHRALGFGDDKYRFHDHDKLA 313

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
                    + A +I            +  +  G    EG      F+     +   ++ 
Sbjct: 314 HYA------NAATDI------------EFEMPFGFKEVEGIHSRTDFDL----SRHEEFS 351

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI------ENFKGNL 546
              +Q              +    K +   +     G    F+ I+       E   G +
Sbjct: 352 GKKLQYF------------DPEQNKSYVPYVVETSIGLDRMFLTILFGSYCEEETSNGEM 399

Query: 547 ------PLWLSPIQAIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
                 P  L+P++  V  +         A+EI + L+    + + D ++ +I  + R  
Sbjct: 400 RVVLKLPAALAPVKLAVLPLVRKDGLDAKAREIVHDLR-FDFACQYDEKD-SIGKRYRRQ 457

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
                P  I    +   + ++ IR   +   ++V +     I+++
Sbjct: 458 DAIGTPFCITVDHQSLEDNTVTIRYRDTMEQERVEISRLNAIISE 502


>gi|237785257|ref|YP_002905962.1| glycyl-tRNA synthetase [Corynebacterium kroppenstedtii DSM 44385]
 gi|237758169|gb|ACR17419.1| glycyl-tRNA synthetase [Corynebacterium kroppenstedtii DSM 44385]
          Length = 460

 Score = 78.3 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 47/336 (13%), Positives = 103/336 (30%), Gaps = 51/336 (15%)

Query: 328 IKDLRTFALKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
             +     L+P    G    F +    S ++ P  + + G  +RNE +   + + R R F
Sbjct: 151 DNEEGLHYLRPETAQGIFVNFKNVQTTSRKKPPFGIGQLGKAFRNEITPG-NFIFRTREF 209

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
            Q +   F           +      + + D G +   ++    PE              
Sbjct: 210 EQMEIEYFVPPADAPQHFDRWVEDCWNWFVDLGIDPDHLRKFDVPE-------------- 255

Query: 447 IMKGVLDTIKNSSQDRINTGVLLG-EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSR 505
                 D   + S   I+     G  G+ +G       +              D      
Sbjct: 256 ------DERAHYSDRTIDLEYQFGFAGSGWGELMGIANRTDFDLQSHIKGSGEDL----- 304

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW---------------- 549
             +F+     E+  P +I    FG     +  +I+ +  +                    
Sbjct: 305 --SFFAQPTGERYVPYVIE-PSFGLTRSLMAFLIDAYHEDEAPNAKGGVDKRTVLRLDRR 361

Query: 550 LSPIQAIVTTIT--SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIII 607
           L+P++  V  ++   +    A+++A  L+    +++ D     I  + R       P  +
Sbjct: 362 LAPVKVAVLPLSKKDTLTPTAEKVAQDLRGL-WNVDYDISGA-IGRRYRRQDEIGTPFCV 419

Query: 608 ICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
                   + ++ +R   +   ++VS+      L +
Sbjct: 420 TVDFDTLDDHAVTVRERDTMEQERVSIDKLQGYLAE 455


>gi|311741374|ref|ZP_07715198.1| glycyl-tRNA synthetase beta subunit [Corynebacterium
           pseudogenitalium ATCC 33035]
 gi|311303544|gb|EFQ79623.1| glycyl-tRNA synthetase beta subunit [Corynebacterium
           pseudogenitalium ATCC 33035]
          Length = 459

 Score = 78.3 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 65/380 (17%), Positives = 125/380 (32%), Gaps = 41/380 (10%)

Query: 277 QTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF-A 335
             + +Y  +   +   E     + D    Q  G W   +A    +K     + D +    
Sbjct: 101 HLIEAYEEKHGHE--PENGLADINDPETGQ-PGDWTEPKAFSGLLKTFLGPVDDEQGLHY 157

Query: 336 LKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           L+P    G    F +    S  + P  +A  G  +RNE +   + + R R F Q +   F
Sbjct: 158 LRPETAQGIFVNFKNVMTSSRMKPPFGIANIGKSFRNEITPG-NFIFRTREFEQMEMEFF 216

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDT 454
               +         +   + Y D G ++  ++L   P+         +   +  K  +D 
Sbjct: 217 VKPGEDEEWHQYWIDDRYNWYVDLGIKEENLRLYEHPK---------EKLSHYSKRTVDV 267

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKFEYILK---------DAIGRDWQCG-TIQVDFNLPS 504
                      G L G             K         D    +      I+    L  
Sbjct: 268 EYAFGFKGSKWGELEGVANRTDYDLSVHAKGSGEDLSYYDQANEERWIPYVIEPAAGLGR 327

Query: 505 RFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT--S 562
              AF V+++ E+  P        G+ +R +          L   L+PI+  V  ++   
Sbjct: 328 SMMAFLVDAYDEEEAPNAKG----GTDKRVV--------LRLDRRLAPIKVAVLPLSKKE 375

Query: 563 SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
              E A+++A+ L++H  +++ D     I  + R       P  +        + ++ +R
Sbjct: 376 ELSEPARKLADKLRAH-WNVDFDVSGA-IGRRYRRQDEIGTPFCVTFDFDTLEDDAVTVR 433

Query: 623 RFGSTTTQKVSLLDAIPILT 642
              +   ++V L D    L 
Sbjct: 434 ERDTMEQERVKLDDLEAYLA 453


>gi|297160648|gb|ADI10360.1| glycyl-tRNA synthetase [Streptomyces bingchenggensis BCW-1]
          Length = 460

 Score = 78.3 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 58/334 (17%), Positives = 104/334 (31%), Gaps = 49/334 (14%)

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVF-NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
                T        L+P    G    F      S R+ P  +A+ G  +RNE +   + +
Sbjct: 145 THLGPTQDSASVAYLRPETAQGIFTNFLAVQQTSRRKPPFGIAQMGKSFRNEITPG-NFI 203

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            R R F Q +   F    +             + Y+D G ++  ++    P+        
Sbjct: 204 FRTREFEQMEMEFFVKPGEDETWQEYWMEQRWNWYRDLGLQEANIRWYEHPK-------- 255

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDF 500
            +   +  K   D     +      G L G       + +Y LK            Q   
Sbjct: 256 -EKLSHYSKRTADIEYRFNLGGSEWGELEGVAN----RTDYDLKA---------HSQASG 301

Query: 501 NLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM----IENFKGN----------- 545
              S F+        E+  P +I     G     +  +    IE+   N           
Sbjct: 302 QDLSYFD----QEAGERWTPYVIE-PAAGVGRAMLAFLLDAYIEDEAPNAKGKMEKRTVL 356

Query: 546 -LPLWLSPIQAIVTTIT--SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            L   L+P++  V  ++        A+ +A  L+ H  +IE D     I  + R      
Sbjct: 357 RLDPRLAPVKVAVLPLSRNPQLSPKAKGLATDLRKH-WNIEFDDAGA-IGRRYRRQDEIG 414

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
            P  +        + ++ +R   +   ++VSL  
Sbjct: 415 TPFCVTVDFDTLEDNAVTVRERDTMKQERVSLDQ 448


>gi|257068863|ref|YP_003155118.1| glycyl-tRNA synthetase [Brachybacterium faecium DSM 4810]
 gi|256559681|gb|ACU85528.1| glycyl-tRNA synthetase [Brachybacterium faecium DSM 4810]
          Length = 463

 Score = 78.3 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 58/328 (17%), Positives = 114/328 (34%), Gaps = 49/328 (14%)

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELP-VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
             L+P    G    F + + + R+ P   + + G  +RNE +   + + R R F Q +  
Sbjct: 160 HFLRPETAQGIFVNFLNVVNATRQKPPFGIGQIGKAFRNEITPG-NFIFRTREFEQMEIE 218

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
            F   EQ   +  +      + + D G +   ++    P+      A +  A   ++   
Sbjct: 219 YFTPAEQAEAQFDEWVEACWNWFIDLGIDADNLRRFDVPDSER---AHYSAATIDLE--- 272

Query: 453 DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
                        G L+G       + ++ L  +   D     +Q               
Sbjct: 273 ---YRFGFTGSEWGELMGIAN----RTDFDL--SSHTDASGTKMQYFDQ----------- 312

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIM----IENFKGN------------LPLWLSPIQAI 556
           + +E+  P +I    FG     +  +     E+   N            L   L+P++  
Sbjct: 313 AANERYTPYVIE-PSFGLTRSMMAFLVDAYTEDEAPNAKGGVDKRTVLKLDPRLAPVKVA 371

Query: 557 VTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
           V  +  + + V  A E+A+ L+ H  ++E D     I  + R       P  +    + A
Sbjct: 372 VLPLSKSEALVPRATELADQLRRH-WNVEMDVTQA-IGRRYRRQDEIGTPFCVTVDFETA 429

Query: 615 SERSIGIRRFGSTTTQKVSLLDAIPILT 642
            ++S+ IR   S   ++V+L      L 
Sbjct: 430 EDQSVTIRERDSMAQERVALDQVESYLA 457


>gi|23336633|ref|ZP_00121840.1| COG0423: Glycyl-tRNA synthetase (class II) [Bifidobacterium longum
           DJO10A]
 gi|189438997|ref|YP_001954078.1| glycyl-tRNA synthetase [Bifidobacterium longum DJO10A]
 gi|189427432|gb|ACD97580.1| Glycyl-tRNA synthetase class II [Bifidobacterium longum DJO10A]
          Length = 490

 Score = 78.3 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 58/379 (15%), Positives = 113/379 (29%), Gaps = 48/379 (12%)

Query: 278 TLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALK 337
            L      K  D   E     ++  +   +    +    NM           +     L+
Sbjct: 102 KLEESYAEKHGDKMPENGMKDIVCPNCGTRGQWTEPRDFNMMLRTHLGPVEDENSLHYLR 161

Query: 338 PMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT 396
           P    G    F +    S    P  +A  G  +RNE +   + + R R F Q +   F T
Sbjct: 162 PETAQGIFVDFKNVMTSSRSRPPFGIANMGKSFRNEITPG-NFIFRTREFEQMEMEFFVT 220

Query: 397 KEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIK 456
                       +     Y D G +   ++    P+         +   +  K  +D   
Sbjct: 221 PGTDEEWHQYWIDARTRWYIDLGVKPENLRHYEHPK---------EKLSHYSKRTVDIEY 271

Query: 457 NSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE 516
                  + G L G            + +    D    +     +L      ++  +  E
Sbjct: 272 KFGFQGSDWGELEG------------IANRTDYDLSAHSKHSGEDLS-----YFNQATGE 314

Query: 517 KCHPVMIHRAVFGSIERFIGIMIENFK----------------GNLPLWLSPIQAIVTTI 560
           K  P +I     G     +  +++ +                   L   L+P++A V  +
Sbjct: 315 KYVPYVIE-PAAGLTRSLMCFLVDAYDVDEAPNTKGGVDKRTVLRLDPRLAPVKAAVLPL 373

Query: 561 TSSAV--EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERS 618
           +        AQ +A+ L+ +   I+ D     I  + R       P+ I        + +
Sbjct: 374 SKKPELQTVAQSLADDLRFNEWMIDYDESGA-IGRRYRRQDEIGTPLCITVDFDTLEDHA 432

Query: 619 IGIRRFGSTTTQKVSLLDA 637
           + IR   +   ++V+L   
Sbjct: 433 VTIRERDTMAQERVALDKV 451


>gi|255323744|ref|ZP_05364872.1| glycine--tRNA ligase [Corynebacterium tuberculostearicum SK141]
 gi|255299234|gb|EET78523.1| glycine--tRNA ligase [Corynebacterium tuberculostearicum SK141]
          Length = 459

 Score = 77.9 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 65/378 (17%), Positives = 125/378 (33%), Gaps = 41/378 (10%)

Query: 279 LISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF-ALK 337
           + +Y  +   +   E     + D    Q  G W   +A    +K     + D +    L+
Sbjct: 103 IEAYEEKHGHE--PENGLADINDPETGQ-PGDWTEPKAFSGLLKTFLGPVDDEQGLHYLR 159

Query: 338 PMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT 396
           P    G    F +    S  + P  +A  G  +RNE +   + + R R F Q +   F  
Sbjct: 160 PETAQGIFVNFKNVMTSSRMKPPFGIANIGKSFRNEITPG-NFIFRTREFEQMEMEFFVK 218

Query: 397 KEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIK 456
             +         +   + Y D G ++  ++L   P+         +   +  K  +D   
Sbjct: 219 PGEDEEWHQYWIDDRYNWYVDLGIKEENLRLYEHPK---------EKLSHYSKRTVDVEY 269

Query: 457 NSSQDRINTGVLLGEGAFYGPKFEYILK---------DAIGRDWQCG-TIQVDFNLPSRF 506
                    G L G             K         D    +      I+    L    
Sbjct: 270 AFGFKGSKWGELEGVANRTDYDLSVHAKGSGEDLSYYDQANDERWIPYVIEPAAGLGRSM 329

Query: 507 NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT--SSA 564
            AF V+++ E+  P        G+ +R +          L   L+PI+  V  ++     
Sbjct: 330 MAFLVDAYDEEEAPNAKG----GTDKRVV--------LRLDRRLAPIKVAVLPLSKKEEL 377

Query: 565 VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRF 624
            E A+++A+ L++H  +++ D     I  + R       P  +        + ++ +R  
Sbjct: 378 SEPARKLADKLRAH-WNVDFDVSGA-IGRRYRRQDEIGTPFCVTFDFDTLEDDAVTVRER 435

Query: 625 GSTTTQKVSLLDAIPILT 642
            +   ++V L D    L 
Sbjct: 436 DTMEQERVKLDDLEAYLA 453


>gi|149178521|ref|ZP_01857109.1| glycyl-tRNA synthetase [Planctomyces maris DSM 8797]
 gi|148842636|gb|EDL57011.1| glycyl-tRNA synthetase [Planctomyces maris DSM 8797]
          Length = 555

 Score = 77.9 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 48/352 (13%), Positives = 107/352 (30%), Gaps = 34/352 (9%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR-ELPVRLAEFGSVYRNEPS 374
            N+           +  T  L+P    G    F + + S R ++P  +A+ G  +RNE +
Sbjct: 210 FNLMFKTIIGALSGEEGTAFLRPETAQGMFVNFKNVVDSGRVKVPFGIAQIGKSFRNEIT 269

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              + + R R F Q +   FC  ++ F             ++D  +   +          
Sbjct: 270 PR-NYIFRSREFEQMEMEFFCHPDESFEWY--------QYWRDRRYAWYIKHGIAEDNLI 320

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           +      + A   +            +    G L G            ++  + R+    
Sbjct: 321 LRDHTQEELAHYSVGTADVEYAFPFMEENEYGELEGIAHRGDFDLRSHMEGKLVREGDQL 380

Query: 495 TIQVDFNLPSRFNAFYVN---SHSEKCHPVMIH--RAVFGSIERFIGIMIENFK------ 543
            ++ + +   ++     +      +     + H      G+    +  + E +       
Sbjct: 381 VVEKNEHGQPKYKGSGKDLTYFDDQTRERFIPHVIEPAAGADRATLAFLCEAYYEDEQPD 440

Query: 544 ----------GNLPLWLSPIQAIVTTITSSAV--EYAQEIANLLKSHHLSIETDFRNETI 591
                           L+P++A V  +   A   E A  I   LKS  +    D +   I
Sbjct: 441 EKGNMQTRTVMRFHPRLAPVKAAVFPLIKKAGMPEIASSIYQRLKSAGIQAVYDQQGA-I 499

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             + R       P  +    +   +  + +R   +    ++ + D +  + K
Sbjct: 500 GRRYRRQDEIGTPFCLTVDGETEQDNCVTLRDRDTLEQVRIPIDDVVTEIHK 551


>gi|251783202|ref|YP_002997507.1| seryl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|242391834|dbj|BAH82293.1| seryl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
          Length = 425

 Score = 77.9 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 43/243 (17%), Positives = 93/243 (38%), Gaps = 21/243 (8%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIF 276
           G       E+ ++    +   E + H  L  ++D+          G+  +F+   G ++ 
Sbjct: 115 GADEEDNVEIRRWGTPRDFDFEVKAHWDLGEDLDILDWERGAKVTGARFLFYKNLGARLE 174

Query: 277 QTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFA 335
           + L ++M    IK+ Y+EI TP +++      +G +  ++ + F +   +        F 
Sbjct: 175 RALYNFMLDEHIKEGYQEIITPYMVNHDSMFGTGQYPKFKEDTFELSDTN--------FV 226

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAH 392
           L P         +   +   +ELP+        +R+E   +     GL+R+  F + +  
Sbjct: 227 LIPTAEVPLTNYYRGEILDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMV 286

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIM 448
            F   E+ + E  K+     +I +  G    ++ L T              +W  A+N  
Sbjct: 287 KFAKPEESYQELEKMTANAENILQKLGLPYRVIALCTGDMGFSAAKTYDLEVWIPAQNTY 346

Query: 449 KGV 451
           + +
Sbjct: 347 REI 349


>gi|258652148|ref|YP_003201304.1| glycyl-tRNA synthetase [Nakamurella multipartita DSM 44233]
 gi|258555373|gb|ACV78315.1| glycyl-tRNA synthetase [Nakamurella multipartita DSM 44233]
          Length = 460

 Score = 77.9 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 58/355 (16%), Positives = 117/355 (32%), Gaps = 50/355 (14%)

Query: 307 QSGHWDSYRANMFAVKCADDTIKDLRTF-ALKPMNCPGHVAVFNH-GLKSYRELPVRLAE 364
             G W   +     +K     ++D      L+P    G    +N+    S ++ P  + +
Sbjct: 129 TRGAWTEPKEFNGLLKTYLGPVEDESGLHYLRPETAQGIFVNYNNVAASSRKKPPFGIGQ 188

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
            G  +RNE +   + + R R F Q +   F              +     Y D G  +  
Sbjct: 189 IGKSFRNEITPG-NFIFRTREFEQMEMEFFVKPGTDEEWHQYWIDTRTDWYVDLGIARDN 247

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           ++    P+         +   +  K  +D            G L G       + ++ LK
Sbjct: 248 LRQYEHPK---------EKLSHYSKRTVDIEYRFHFQGSEWGELEGIAN----RTDFDLK 294

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
                        VD +              E+  P +I     G     +  ++E +  
Sbjct: 295 THS------EHSGVDLSYFE-------QESGERWTPYVIE-PAAGVGRPMMAFLLEAYAQ 340

Query: 545 N----------------LPLWLSPIQAIVTTITSSAV--EYAQEIANLLKSHHLSIETDF 586
           +                L   L+PI+A V  ++ +A     A+++A  L+    +++ D 
Sbjct: 341 DEAPNTKGGVDVRTVLRLDPRLAPIKAAVLPLSRNADLSPIARDLAASLRKS-WNVDFDD 399

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
             + I  + R       P  +      A+++++ IR   + + ++V L   I  L
Sbjct: 400 AGQ-IGRRYRRQDEIGTPFCLTVDFDTATDQAVTIRDRDTMSQERVGLDQVIGYL 453


>gi|254430508|ref|ZP_05044211.1| seryl-tRNA synthetase [Cyanobium sp. PCC 7001]
 gi|197624961|gb|EDY37520.1| seryl-tRNA synthetase [Cyanobium sp. PCC 7001]
          Length = 425

 Score = 77.9 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 53/349 (15%), Positives = 111/349 (31%), Gaps = 61/349 (17%)

Query: 220 IYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED----GSGVIFWHRKGWKI 275
             GT+     E+ ++    +ES   +H ++A ++ LF          S  +    +G ++
Sbjct: 117 PDGTSEADNVEVKRWGNPRQESGLLEHWQIAEQLGLFDTERSVRIAQSRFVTLLGQGARL 176

Query: 276 FQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
            + LIS+M  R     Y E+  P +++      SG    +    F     D         
Sbjct: 177 ERALISFMLDRHGSRGYTEVMPPILVNSASLTASGQLPKFAEESFRCSGDD--------L 228

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDA 391
            L P       ++    +    +LP++   +   +R E         GL+R+  F + + 
Sbjct: 229 WLTPTAEVPLTSLHRDEVIPAEQLPLKYCAYTPCFRREAGSYGRDTRGLIRLHQFNKVEL 288

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP----EKRVGSDALWDDAENI 447
           + F   +       +I +   +I +        ++L T        R     +W      
Sbjct: 289 YWFTRPDHSAEAHEQITSDAEAILEALELPYRRIELCTGDLGFSAARTFDLEVW------ 342

Query: 448 MKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFN 507
                               L G GA+              R+    ++  DF    R +
Sbjct: 343 --------------------LPGAGAY--------------REISSCSVCGDFQ-ARRAS 367

Query: 508 AFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI 556
             + +  ++    V        ++ R +  ++EN +        P   +
Sbjct: 368 IRFKDPDTKSTQLVHTLNGSGLAVGRTMAALLENGQQADGTVRLPKALV 416


>gi|39938628|ref|NP_950394.1| ribosomal protein L13 [Onion yellows phytoplasma OY-M]
 gi|39721737|dbj|BAD04227.1| uridine kinase [Onion yellows phytoplasma OY-M]
          Length = 546

 Score = 77.9 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 70/173 (40%), Gaps = 3/173 (1%)

Query: 36  KKAVAVAINGKVCDLSDPVRE--GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQ 93
           K   A  +N K+ +L+  +      I  +   +  ++ +   S  +++A A   ++  + 
Sbjct: 29  KNVYAAKVNNKLKELTFKLHAPINQITFLGAWNAAAVNIYEASLRYLVAMASYKLFENIS 88

Query: 94  VAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESK 153
           +             F KE  F  +   +I+++M  ++++     K+ L  EKA ++++S 
Sbjct: 89  LHFTYYSSSSILVSFPKEITFLPEMFQKIKEEMHLLVSQKLDITKKKLPLEKALQIYQSL 148

Query: 154 KEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGA 206
               K+ +L+   A    TLY    + +      V +T  + K+       G 
Sbjct: 149 GFGDKISLLKQ-KAPSFATLYFCQNYCNYMYQGLVPNTSYLDKYHLFYHQNGF 200


>gi|314933737|ref|ZP_07841102.1| glycine--tRNA ligase [Staphylococcus caprae C87]
 gi|313653887|gb|EFS17644.1| glycine--tRNA ligase [Staphylococcus caprae C87]
          Length = 463

 Score = 77.9 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 54/387 (13%), Positives = 116/387 (29%), Gaps = 60/387 (15%)

Query: 277 QTLISYMRRK------IKDDYEEINTPQVLDQH----LWQQSGHWDSYRANMFAVKCADD 326
           + +  YM+++      I D        Q++D          + +W   R      K    
Sbjct: 101 KLIEDYMQKEKGDENFIADGLSFDEMKQIIDDEGIVCPVSGTANWTDIRQFNLMFKTFQG 160

Query: 327 TIKDLR-TFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVR 384
             +D      L+P    G    + +  +S  ++LP  + + G  +RNE +   + + R R
Sbjct: 161 VTEDSTNELFLRPETAQGIFVNYKNVQRSMRKKLPFGIGQIGKSFRNEITPG-NFIFRTR 219

Query: 385 GFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDD 443
            F Q +   FC   E++  +         + +K F  + +          R+      + 
Sbjct: 220 EFEQMELEFFCKPGEEIEWQ---------NFWKTFASQWLKDLNINEENMRLRDHDADEL 270

Query: 444 AENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLP 503
           +           K         G+           F+         +             
Sbjct: 271 SHYSNATTDIEYKFPFGWGELWGIASRTD------FDLQKHSEHSGED------------ 312

Query: 504 SRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK-------------GNLPLWL 550
                ++    +EK  P  I     G+    +  + + ++              +    L
Sbjct: 313 ---FKYHDPETNEKYVPYCIE-PSLGADRVTLAFLCDAYEEEGVEGSKDARTVMHFHPAL 368

Query: 551 SPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           +P +A V  ++      A +I   L     SI+ D   ++I  + R       P  I   
Sbjct: 369 APYKAAVLPLSKKLSSEAIKIFEQLSQS-FSIDFDES-QSIGKRYRRQDEIGTPYCITFD 426

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDA 637
                +  + +R   S    ++ + + 
Sbjct: 427 FDSLEDNQVTVRDRDSMEQVRMPISEL 453


>gi|319900290|ref|YP_004160018.1| glycyl-tRNA synthetase [Bacteroides helcogenes P 36-108]
 gi|319415321|gb|ADV42432.1| glycyl-tRNA synthetase [Bacteroides helcogenes P 36-108]
          Length = 513

 Score = 77.9 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 56/345 (16%), Positives = 113/345 (32%), Gaps = 54/345 (15%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    + +  K+   ++P  +A+ G  +RNE  
Sbjct: 194 FNLMFSTEMGSTSDGAMKIYLRPETAQGIFVNYLNVQKTGRMKIPFGIAQIGKAFRNEIV 253

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
            +   + R+R F Q +   F     E  + +  K   L       FG +        +  
Sbjct: 254 -ARQFIFRMREFEQMEMQFFVKPGTELEWFKTWKATRLKWHKALGFGDDHYRYHDHDKLA 312

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
                    + A +I            +  +  G    EG      F+            
Sbjct: 313 HYA------NAATDI------------EFLMPFGFKEVEGIHSRTNFD------------ 342

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM--------IENFKG 544
              +        +   ++    +E   P +I  ++ G    F+ IM        +EN + 
Sbjct: 343 ---LSQHEKFSGKNIKYFDPETNESYTPFVIETSI-GVDRMFLSIMSASYCEETLENGET 398

Query: 545 ----NLPLWLSPIQAIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
                LP  L+P++  V  +       E A+EI + LK  H   + D ++ +I  + R  
Sbjct: 399 RVVLKLPAALAPVKLAVMPLVKKDGLPEKAREIIDDLK-FHFHCQYDEKD-SIGKRYRRQ 456

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
                P  +    +   +  + +R   +   ++V++ +   I+  
Sbjct: 457 DAIGTPYCVTVDHQTLEDNCVTLRNRDTMQQERVAISELNNIIAD 501


>gi|169607863|ref|XP_001797351.1| hypothetical protein SNOG_06993 [Phaeosphaeria nodorum SN15]
 gi|111064524|gb|EAT85644.1| hypothetical protein SNOG_06993 [Phaeosphaeria nodorum SN15]
          Length = 373

 Score = 77.9 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 56/167 (33%), Gaps = 8/167 (4%)

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
            PK E    D         T  +         A       +    V +     G   R I
Sbjct: 199 CPKCETGKLDVAKAIEVAHTFHLGTRYSDPLGAIVSMPDGKTREAVQMGCHGIGVS-RLI 257

Query: 536 GI----MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NET 590
           G     + ++   N P  ++P +A +          A+ + + L    +    D R  ++
Sbjct: 258 GAIASLLSDSKGLNWPRVMAPYEAAILVAPQIEEGGAERVYDALD--GVDAVLDDREGKS 315

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
           + +K+R+  +   P++++ G     +  + ++       + V L + 
Sbjct: 316 LGWKLRDADLIGYPVVVVMGRSWKEKGVVEVQCRRLDVKKDVGLDEL 362


>gi|84995882|ref|XP_952663.1| prolyl-t-RNA synthase [Theileria annulata strain Ankara]
 gi|65302824|emb|CAI74931.1| prolyl-t-RNA synthase, putative [Theileria annulata]
          Length = 460

 Score = 77.9 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 53/347 (15%), Positives = 110/347 (31%), Gaps = 51/347 (14%)

Query: 269 HRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
              G +I   + +       K    +++ P +   +         +    +   +    +
Sbjct: 83  LPLGHRIINRISNIFNVELYKLGAVQLSFPLLNPDN------VVSNTGNTVGDSELFKVS 136

Query: 328 IKDLRTFALKPMNCPGHVAVFNHG--LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRG 385
                 + L          V  +     S  +LPV L +  + +R+E      G +R+R 
Sbjct: 137 RNGSLEYRLSGTCEDLCNVVLKNELTPLSKLQLPVLLYQINTKFRDELR-VNEGKVRLRE 195

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
           F   D +   + EQ  +    +              +       R               
Sbjct: 196 FLMLDLYSLHSSEQCSDSTYSLVLECFVNILRLLGLQFTTLNCNRNNIFSHE-------- 247

Query: 446 NIMKGVLDTIKNSSQDRI-NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPS 504
                 L    +++QD+  NT + +G    +G ++     D  G +++            
Sbjct: 248 ------LRVQHSNNQDQNSNTELEVGHLFKFGTRYS----DTYGLEYEVS---------- 287

Query: 505 RFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP-IQAIVTTITSS 563
                       +   + ++    G I R + ++I N+     + L   +     TI  S
Sbjct: 288 ----------GRRREKLYMNSYGIG-INRLLNVLINNYSDEFGIKLPQLVAPYDITIIDS 336

Query: 564 AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
             +   +I+  L    L++  D RN+TI  K+ +     IP I+I G
Sbjct: 337 TTKDGWQISRGLMKKGLTVLYDDRNDTIKNKLLDSKRIGIPHILILG 383


>gi|291457507|ref|ZP_06596897.1| glycine--tRNA ligase [Bifidobacterium breve DSM 20213]
 gi|291381342|gb|EFE88860.1| glycine--tRNA ligase [Bifidobacterium breve DSM 20213]
          Length = 490

 Score = 77.9 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 58/379 (15%), Positives = 112/379 (29%), Gaps = 48/379 (12%)

Query: 278 TLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALK 337
            L      K  D   E     ++  +   +    +    NM           +     L+
Sbjct: 102 KLEESYAEKHGDTMPENGMKDIVCPNCGTRGQWTEPRDFNMMLRTHLGPVEDENSLHYLR 161

Query: 338 PMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT 396
           P    G    F +    S  + P  +A  G  +RNE +   + + R R F Q +   F  
Sbjct: 162 PETAQGIFVDFKNVMTSSRSKPPFGIANMGKSFRNEITPG-NFIFRTREFEQMEMEFFVE 220

Query: 397 KEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIK 456
                       +     Y D G +   ++    P+         +   +  K  +D   
Sbjct: 221 PGTDEEWHQYWIDARTRWYIDLGVKPENLRHYEHPK---------EKLSHYSKRTVDIEY 271

Query: 457 NSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE 516
                  + G L G       + +Y L     R  +                ++  +  E
Sbjct: 272 KFGFQGSDWGELEGIAN----RTDYDLTAHSKRSGE-------------DLCYFNQATGE 314

Query: 517 KCHPVMIHRAVFGSIERFIGIMIENFK----------------GNLPLWLSPIQAIVTTI 560
           K  P +I     G     +  +++ +                   L   L+P++A V  +
Sbjct: 315 KYIPYVIE-PAAGLTRSLMCFLVDAYDVDEAPNTKGGVDKRTVLRLDPRLAPVKAAVLPL 373

Query: 561 TSSAV--EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERS 618
           +        AQ +A+ L+ +   I+ D     I  + R       P+ I        + +
Sbjct: 374 SKKPELRTVAQNLADDLRFNEWMIDYDESGA-IGRRYRRQDEIGTPLCITVDFDTLEDHA 432

Query: 619 IGIRRFGSTTTQKVSLLDA 637
           + IR   +    +V+L   
Sbjct: 433 VTIRERDTMAQDRVALDKV 451


>gi|239828654|ref|YP_002951278.1| glycyl-tRNA synthetase [Geobacillus sp. WCH70]
 gi|239808947|gb|ACS26012.1| glycyl-tRNA synthetase [Geobacillus sp. WCH70]
          Length = 460

 Score = 77.9 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 56/343 (16%), Positives = 103/343 (30%), Gaps = 50/343 (14%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    F +  ++  ++LP  +A+ G  +RNE +
Sbjct: 149 FNLMFKTYQGVTESSANEIYLRPETAQGIFVNFKNVQRTMRKKLPFGIAQIGKSFRNEIT 208

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
              +   R R F Q +   FC    E  + +  K            G +   ++L     
Sbjct: 209 PG-NFTFRTREFEQMELEFFCKPGEELEWFDYWK--QFCKQWLLSLGMKPENIRLRDHT- 264

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
                           K  L    N++ D I      G G  +G       +        
Sbjct: 265 ----------------KEELSHYSNATTD-IEYKFPFGWGELWG----IASRTDYDLKQH 303

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK--------- 543
                 DF        +     +E+  P  I     G+    +  MI+ +          
Sbjct: 304 MEYSGEDF-------RYIDQETNERYIPYCIE-PSLGADRVTLAFMIDAYDEEELEDGTT 355

Query: 544 ---GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
                L   L+P +A V  ++    E A+ I   L  H   ++ D    +I  + R    
Sbjct: 356 RTVMRLHPALAPYKAAVFPLSKKLAEGARNIFADLSKH-FMVDYDESG-SIGKRYRRQDE 413

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              P  I        +  + +R   +    ++ + +    L +
Sbjct: 414 IGTPFCITYDFDSEQDGKVTVRDRDTMEQVRIPISELKSFLEE 456


>gi|116669891|ref|YP_830824.1| glycyl-tRNA synthetase [Arthrobacter sp. FB24]
 gi|116610000|gb|ABK02724.1| glycyl-tRNA synthetase [Arthrobacter sp. FB24]
          Length = 461

 Score = 77.9 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 64/443 (14%), Positives = 133/443 (30%), Gaps = 105/443 (23%)

Query: 270 RKGWKIFQTLISYMRRKIKDDYEEIN---TPQVLDQHLWQQSGHWD-------------- 312
             G ++ + +     + +    E++    +  +L + +W+ SGH +              
Sbjct: 38  PLGAELKENIKRQWWQSVVRGREDVVGLDSSVILPRQVWEASGHVEVFSDPLVECLSCHK 97

Query: 313 SYRANMFAVKCADDTIK---------------------------------------DLRT 333
            YRA+    +  +   +                                       +   
Sbjct: 98  RYRADHLEEEYEEKKGRPAENGLKDIACANCGTRGEWTEPQEFSGLLKTFLGPVANEEGM 157

Query: 334 FALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
             L+P    G    FN+ L  S ++ P  + + G  +RNE +   + + R R F Q +  
Sbjct: 158 HYLRPETAQGIFVNFNNVLTTSRKKPPFGIGQIGKSFRNEITPG-NFIFRTREFEQMEME 216

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
            F                 +  Y   G +   ++    P          +   +  KG  
Sbjct: 217 FFVEPGTDEQWHQYWMKERMDWYTGLGLKAENLRFFEHPL---------EKLSHYSKGTT 267

Query: 453 DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
           D            G L G            + +    D    +     +L      ++  
Sbjct: 268 DIEYRFGFQGSEWGELEG------------IANRTDFDLTTHSKASGHDLS-----YFNQ 310

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGN------------LPLWLSPIQAI 556
           + +E+  P +I     G    F+  +I    E+   N            L   L+P++A 
Sbjct: 311 ATNERYTPYVIE-PAAGLTRSFMAFLIDAYTEDEAPNAKGGVDVRTVLKLDPRLAPVKAA 369

Query: 557 VTTIT--SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
           V  ++        A+ +   L+ +  +I+ D     I  + R       P  I       
Sbjct: 370 VLPLSRNEDLSPKAKALGAQLRKN-WNIDFDDAGA-IGRRYRRQDEIGTPFCITVDFDTL 427

Query: 615 SERSIGIRRFGSTTTQKVSLLDA 637
            ++++ IR   + + ++VSL   
Sbjct: 428 EDQAVTIRERDTMSQERVSLDKV 450


>gi|126696727|ref|YP_001091613.1| seryl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
 gi|166222760|sp|A3PE37|SYS_PROM0 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|126543770|gb|ABO18012.1| Seryl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
          Length = 425

 Score = 77.9 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 41/242 (16%), Positives = 83/242 (34%), Gaps = 20/242 (8%)

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI----AEDGSGVIFWHRKGWKIFQ 277
           G   +   ++  +   L +   + H ++   ++LF          S  +     G ++ +
Sbjct: 119 GKDESDNLQIKTWGDPLIKENIKSHWEIGESLNLFDFVKSTKISKSRFVTLIGNGARLER 178

Query: 278 TLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFAL 336
            LI++M     K+ Y E+  P +++      SG    +    F     D          L
Sbjct: 179 ALINFMLDMHTKNGYLELMPPALVNSESLTGSGQLPKFSNESFKCFNDD--------LWL 230

Query: 337 KPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHV 393
            P       A   + L   ++LP++   +   +R E         GL+R+  F + + + 
Sbjct: 231 SPTAEVPLTAFHRNELIDPKKLPIKYVAYSPCFRREAGSYGRDTKGLIRLHQFNKVELYW 290

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP----EKRVGSDALWDDAENIMK 449
           FC   +      KI +   SI K       +V + T        R     +W  +    +
Sbjct: 291 FCDPSKSLEAHKKITSDAESILKKLNLPYRLVDICTGDLGFSSSRTFDLEVWLPSSKCYR 350

Query: 450 GV 451
            +
Sbjct: 351 EI 352


>gi|294660421|ref|NP_853173.2| glycyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)]
 gi|298286863|sp|Q7NB88|SYG_MYCGA RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|284812080|gb|AAP56741.2| glycyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)]
 gi|284930655|gb|ADC30594.1| glycyl-tRNA synthetase [Mycoplasma gallisepticum str. R(high)]
          Length = 463

 Score = 77.9 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 57/348 (16%), Positives = 111/348 (31%), Gaps = 48/348 (13%)

Query: 307 QSGHWDSYRANMFAVKCADDTIKD-LRTFALKPMNCPGHVAVFNHGLKSYR-ELPVRLAE 364
           +S +W   R      K     ++D L T  L+P    G    F + +++ R +LP  +A+
Sbjct: 137 ESTNWTKIRKFNLMFKTFQGVVEDSLNTIYLRPETAQGIFINFKNIVRTQRMKLPFGVAQ 196

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
            G  +RNE +   + + R R F Q +   F   E +  +     +  I+  +DF   K++
Sbjct: 197 IGKAFRNEITPG-NFIFRTREFEQFEIEYFLEPELVKEK----FDWYINQIEDFLINKLL 251

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +         +  D L   A    + +              G+    G F          
Sbjct: 252 INKQLIKRHEIAKDEL---AHYSSRTIDFQFNFPHGWSELWGLAH-RGNFD--------- 298

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK- 543
                      +    N   +   ++      K  P +I     G       I   ++  
Sbjct: 299 -----------LTAHSNESGKTLDYHNEIEKTKIIPDVIE-PSLGIERILYAIFCAHYHV 346

Query: 544 -----------GNLPLWLSPIQAIVTTITSSAVEYAQEIANLL---KSHHLSIETDFRNE 589
                        LP+ LSP Q  +  + +   + A ++   L      +L  + D    
Sbjct: 347 EQLADNDSREVLRLPVSLSPYQLAILPLVNKLKDQAYQLYLDLLKISDANLRFDFD-SAG 405

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
           +I  + R +        +        +  + IR   S    K+ + + 
Sbjct: 406 SIGKRYRRYDAIGAKYCLTYDFDSLEKGIVTIRERDSMEQIKIPISEL 453


>gi|73662500|ref|YP_301281.1| glycyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|123747875|sp|Q49Y08|SYG_STAS1 RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|72495015|dbj|BAE18336.1| glycyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 463

 Score = 77.9 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 49/344 (14%), Positives = 97/344 (28%), Gaps = 51/344 (14%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    + +  ++  ++LP  + + G  +RNE +
Sbjct: 151 FNLMFKTFQGVTEDSTNEIFLRPETAQGIFVNYKNVQRTMRKKLPFGIGQIGKSFRNEIT 210

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
              + + R R F Q +   FC    E  +    K          +   E   ++     E
Sbjct: 211 PG-NFIFRTREFEQMELEFFCKPGEEIEWQNYWKTFASQWLKDLNLSEEATRLRDHDADE 269

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
               S+A  D                    I      G G  +G             +  
Sbjct: 270 LSHYSNATTD--------------------IEYRFPFGWGELWGIASRTDFDLKKHSEHS 309

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK--------- 543
               Q                  EK  P  I     G+    +  + + +          
Sbjct: 310 GEDFQYHDQ-----------ETGEKYIPYCIE-PSLGADRVTLAFLCDAYDEEGVEGSKD 357

Query: 544 ----GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
                +    L+P +A V  ++      A ++   L S   +I+ D   ++I  + R   
Sbjct: 358 SRTVLHFHPALAPYKAAVLPLSKKLSGDAIKVFEEL-SADFAIDFDES-QSIGKRYRRQD 415

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
               P  I        +  + +R   +    ++ + +    L +
Sbjct: 416 EIGTPYCITFDFDSLEDEKVTVRDRDTMEQVRMPITELKSFLAE 459


>gi|20093592|ref|NP_613439.1| glycyl-tRNA synthetase [Methanopyrus kandleri AV19]
 gi|34395858|sp|Q8TYY9|SYG_METKA RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|19886451|gb|AAM01369.1| Glycyl-tRNA synthetase, class II [Methanopyrus kandleri AV19]
          Length = 571

 Score = 77.9 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 30/148 (20%), Positives = 62/148 (41%), Gaps = 11/148 (7%)

Query: 503 PSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG------NLPLWLSPIQAI 556
           P  +         E+ +P +I    +G I+R +  ++E+           P WL+PI+  
Sbjct: 411 PECYEIVKEKVTGERFYPHVIE-PSYG-IDRILYCVLEHNFDPEEGVFRFPAWLAPIEVG 468

Query: 557 VTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
           V  +   S  VEYA+ +A +L+    ++E D    +I  +        +P  +    +  
Sbjct: 469 VFPLLKRSDMVEYARRVARMLREEGFTVEYDDSG-SIGRRYARADEIGVPYCVTVDHETL 527

Query: 615 SERSIGIRRFGSTTTQKVSLLDAIPILT 642
            + ++ IR   +T   +V + +   +L 
Sbjct: 528 EDDTVTIRDRDTTEQVRVEVDELADVLR 555



 Score = 54.0 bits (128), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 48/340 (14%), Positives = 101/340 (29%), Gaps = 70/340 (20%)

Query: 256 FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDS 313
           F I     G   +   G  + + +    R     K+ + EI  P +L   +++ SGH + 
Sbjct: 23  FRIYGGARGFYDYGPLGALLKRKIEEKWREYYVHKEGFMEIEAPNLLIGEVFEASGHVEH 82

Query: 314 Y-------------------RANMFAVKCADDTIKDLRTFA------------------- 335
           +                         V     + ++L                       
Sbjct: 83  FIDPMTHCSECGEFFRADHLAEEELGVDAEGMSPEELEDLIREHDLRCPECGGELAEVTE 142

Query: 336 ------------------LKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPSGS 376
                             L+P         F    + + ++LP  + + G  YRNE S  
Sbjct: 143 FNLMFDTNIGPKEGRTGYLRPETAQAIFIQFKDLYRWARQKLPFGVVQIGRAYRNEISPR 202

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
             G++R+R FTQ +A VF   E+      + +   +  +     ++           R  
Sbjct: 203 -QGVIRLREFTQAEAEVFFDPEEKEYPGFERYADEVLKFYPIEEQRKENGEMLEMSVREA 261

Query: 437 SDALWDD-----AENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG-PKFEYILKDAIGRD 490
            +             + K +L+ +   ++   +   L  E A Y    ++  +K      
Sbjct: 262 VEEGMVSQPIGYFLGLTKRMLNEMGVPNEAIRSRQHLPEERAHYASDCWDVEVKLERFGW 321

Query: 491 WQCGTIQVDFNLPSRFNAFYVNSH----SEKCHPVMIHRA 526
            +   I    +   + ++ +         E   P +++R 
Sbjct: 322 VEVVGIADRTDYDLKKHSEHSGEDLRAFRELEEPKIVYRP 361


>gi|300933216|ref|ZP_07148472.1| glycyl-tRNA synthetase [Corynebacterium resistens DSM 45100]
          Length = 459

 Score = 77.9 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 49/329 (14%), Positives = 112/329 (34%), Gaps = 49/329 (14%)

Query: 334 FALKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
             L+P    G    F +    S ++ P  +A+ G  +RNE +   + + R R F Q +  
Sbjct: 156 HYLRPETAQGIFTNFKNVMTTSRQKPPFGIAQVGKSFRNEITPG-NFIFRTREFEQMEME 214

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
            F    +      K  +     Y D G ++  ++L   P+                    
Sbjct: 215 FFVKPGEDEEWHQKWIDDRYQWYIDLGIKEENLRLYEHPQ-------------------- 254

Query: 453 DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
           + + + S+  ++         F G K+   L+    R      +  + +      +++  
Sbjct: 255 EKLSHYSKRTVDVEYAF---HFKGSKWG-ELEGVANRTDYDLRVHSEGSGED--LSYFDQ 308

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIENFK----------------GNLPLWLSPIQAI 556
             +E+  P +I     G     +  + + ++                  L   L+PI+  
Sbjct: 309 ETNERWIPYVIE-PAAGLGRAMMAFLCDAYEEEEVPNAKGGTDTRTVLKLDRRLAPIKVA 367

Query: 557 VTTIT--SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
           V  ++   +    A+++AN L+    +++ D     I  + R       P  +       
Sbjct: 368 VLPLSKKDTLTPTAEKVANQLRGL-WNVDYDVSGA-IGRRYRRQDEIGTPFCVTVDFDTL 425

Query: 615 SERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            + ++ +R   +   ++V + D    L +
Sbjct: 426 EDNAVTVRERDTMEQERVKIDDLQAYLGE 454


>gi|325298934|ref|YP_004258851.1| glycyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
 gi|324318487|gb|ADY36378.1| glycyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
          Length = 514

 Score = 77.9 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 55/343 (16%), Positives = 112/343 (32%), Gaps = 50/343 (14%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    + +  K+   ++P  +A+ G  +RNE  
Sbjct: 195 FNLMFSTEMGSTADGSMKVYLRPETAQGIFVNYLNVQKTGRMKIPFGIAQIGKAFRNEIV 254

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
            +   + R+R F Q +   F           K     +  +K  GF     +     +  
Sbjct: 255 -ARQFIFRMREFEQMEMQFFVKPGTELEWFKKWKETRLKWHKALGFGDDHYRYHDHEKLA 313

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
             ++A  D                 +  +  G    EG      F+              
Sbjct: 314 HYANAATDI----------------EFLMPFGFKEVEGIHSRTNFD-------------- 343

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM--------IENFKG-- 544
            +        +   ++    +E   P +I  ++ G    F+ +M        +EN +   
Sbjct: 344 -LSQHEKFSGKSIKYFDPEINESYTPYVIETSI-GVDRMFLSVMSASYTEEKLENGETRV 401

Query: 545 --NLPLWLSPIQAIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              LP  L+P++  V  +       E A+EI + LK  H   + D ++ +I  + R    
Sbjct: 402 VLKLPAALAPVKLAVMPLVKKDGLPEKAREIMDDLK-FHFHCQYDEKD-SIGKRYRRQDA 459

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              P  +    +   +  + +R   +   ++V++ D   I+  
Sbjct: 460 IGTPYCVTVDHQTLEDNCVTLRNRDTMEQERVAIADLNNIIAD 502


>gi|34596188|gb|AAQ76784.1| bifunctional aminoacyl-tRNA synthetase [Herdmania curvata]
          Length = 187

 Score = 77.9 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 34/162 (20%), Positives = 68/162 (41%), Gaps = 5/162 (3%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRAN 317
            D SG        + I++ + ++   +IK    E    P  + Q   + +  H + +   
Sbjct: 21  YDVSGCYILRPWSYGIWERIKAFFDTEIKKLGVENCYFPIFVSQSALEKEKEHIEDFAPE 80

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           +  V  +  +       A++P +       +   ++S+R+LP+R  ++ +V R E     
Sbjct: 81  VAWVTKSGQSEL-AEPIAIRPTSETVMYPAYAKWVQSHRDLPLRYNQWCNVVRWEFK-HP 138

Query: 378 HGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIYKDF 418
              +R R F   + H  F TK +   E L+I  L   +Y+D+
Sbjct: 139 QPFLRTREFLWQEGHSAFATKPEAEKEVLQILELYAQVYEDY 180


>gi|284931433|gb|ADC31371.1| glycyl-tRNA synthetase [Mycoplasma gallisepticum str. F]
          Length = 463

 Score = 77.9 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 57/348 (16%), Positives = 112/348 (32%), Gaps = 48/348 (13%)

Query: 307 QSGHWDSYRANMFAVKCADDTIKD-LRTFALKPMNCPGHVAVFNHGLKSYR-ELPVRLAE 364
           ++ +W   R      K     ++D L T  L+P    G    F + L++ R +LP  +A+
Sbjct: 137 EAANWTKIRKFNLMFKTFQGVVEDSLNTIYLRPETAQGIFINFKNILRTQRMKLPFGVAQ 196

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
            G  +RNE +   + + R R F Q +   F   E +  +     +  I+  +DF   K++
Sbjct: 197 IGKAFRNEITPG-NFIFRTREFEQFEIEYFLEPELVKEK----FDWYINQIEDFLINKLL 251

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +         +  D L   A    + +              G+    G F          
Sbjct: 252 INKELIKRHEIAKDEL---AHYSSRTIDFQFNFPHGWSELWGLAH-RGNFD--------- 298

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK- 543
                      +    N   +   ++      K  P +I     G       I+  ++  
Sbjct: 299 -----------LTAHSNQSGKTLDYHNEIEKTKIIPDVIE-PSLGIERILYAIVCAHYHV 346

Query: 544 -----------GNLPLWLSPIQAIVTTITSSAVEYAQEIANLL---KSHHLSIETDFRNE 589
                        LP+ LSP Q  +  + +   + A ++   L      +L  + D    
Sbjct: 347 EQLADNDSREVLRLPISLSPYQLAILPLVNKLKDQAYQLYLELLKISDTNLRFDFD-SAG 405

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
           +I  + R +        +        +  + IR   S    K+ + + 
Sbjct: 406 SIGKRYRRYDAIGTKYCLTYDFDSLEKGIVTIRERDSMEQIKLPISEL 453


>gi|83319862|ref|YP_424478.1| glycyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum
           ATCC 27343]
 gi|123753722|sp|Q2SRY5|SYG_MYCCT RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|83283748|gb|ABC01680.1| glycyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum
           ATCC 27343]
          Length = 456

 Score = 77.9 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 42/346 (12%), Positives = 98/346 (28%), Gaps = 51/346 (14%)

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YREL 358
             +   Q       ++ N   ++       D     L+P    G    F +  +S  ++L
Sbjct: 135 QKKDFTQIRKFALMFKTNQGVLED------DSSIVYLRPETAQGIFINFKNVQRSMRKKL 188

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P  + + G  +RNE +   + + R R F Q +   F             ++      +  
Sbjct: 189 PFGIGQIGKSFRNEITPG-NFIFRTREFEQMELEFFFDPNDS-------NDWFKYWLEQI 240

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
                      +   ++  +   + A   +K                G+           
Sbjct: 241 EIFLTQKISLDKNNYKIRENLKDELAHYALKTSDIEFNFPFGWGELWGISHRSD------ 294

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI- 537
           F+  +   + ++                +   +   + +     +     G     + I 
Sbjct: 295 FDLKVHQNLSKE----------------DLTVLKEENNQKILANVIEPSVGVERLMLAIF 338

Query: 538 --------MIENFK---GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF 586
                   + EN       LP  L+P Q  +T ++    + A ++   L         D 
Sbjct: 339 WQAYTEEQLEENNSRIVLKLPYNLAPYQVAITPLSKQLNQNANQLFLELLK-DFDAIYDE 397

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
               I  + R       P +I    +   ++ + IR   +   +++
Sbjct: 398 TGN-IGKRYRRQDAIGTPFVITYDFQTLEDQKVTIRYRDTMKQERI 442


>gi|189464411|ref|ZP_03013196.1| hypothetical protein BACINT_00752 [Bacteroides intestinalis DSM
           17393]
 gi|189438201|gb|EDV07186.1| hypothetical protein BACINT_00752 [Bacteroides intestinalis DSM
           17393]
          Length = 513

 Score = 77.9 bits (190), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 54/343 (15%), Positives = 114/343 (33%), Gaps = 50/343 (14%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    + +  K+   ++P  +A+ G  +RNE  
Sbjct: 194 FNLMFSTEMGSTSDGAMKIYLRPETAQGIFVNYLNVQKTGRMKIPFGIAQIGKAFRNEIV 253

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
            +   + R+R F Q +   F       +   K   + +  +K  GF     +     +  
Sbjct: 254 -ARQFIFRMREFEQMEMQFFVKPGTELDWFKKWKEIRLKWHKALGFGDDHYRYHDHDKLA 312

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
             ++A  D                 +  +  G    EG      F+              
Sbjct: 313 HYANAATDI----------------EFLMPFGFKEVEGIHSRTNFD-------------- 342

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM--------IENFK--- 543
            +        +   ++    +E   P +I  ++ G    F+ IM        +E+ +   
Sbjct: 343 -LSQHEKFSGKNIKYFDPETNESYTPYVIETSI-GVDRMFLSIMSASYCEEQLESGESRV 400

Query: 544 -GNLPLWLSPIQAIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              LP  L+P++  V  +       E A+EI + LK  H   + D ++ +I  + R    
Sbjct: 401 VLRLPAALAPVKLAVMPLVKKDGLPEKAREIIDSLK-FHFHCQYDEKD-SIGKRYRRQDA 458

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              P  +    +   +  + +R   +   ++V++ +   I+  
Sbjct: 459 IGTPYCVTVDHQTLEDNCVTLRNRDTMQQERVAIAELNNIIAD 501


>gi|186701898|ref|ZP_02971551.1| glycyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC
           27818]
 gi|186701208|gb|EDU19490.1| glycyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC
           27818]
          Length = 473

 Score = 77.9 bits (190), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 54/351 (15%), Positives = 111/351 (31%), Gaps = 55/351 (15%)

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR-ELPVRLAEFGSVYRNEP 373
             N+                 L+P    G    F +  +S R  LP  +A+ G  +RNE 
Sbjct: 148 HFNLMFKTHQGVIEDPKNIVYLRPETAQGIFVNFKNVQRSMRLHLPFGIAQIGKSFRNEI 207

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
           +   + + R R F Q +   F  +E  ++   K  N I +         +         +
Sbjct: 208 TPG-NFIFRTREFEQMEIEFFLKEETAYDVFDKYLNQIQNWLVTCCGLDLNNLRKHEHPR 266

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA--FYGPKFEYILKDAIGRDW 491
                              + + + S+  I+       G    YG  +            
Sbjct: 267 -------------------EELSHYSKKTIDFEYNFLHGFSELYGIAY-----------R 296

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK-------- 543
               + V  NL  + +  Y +  +++ +   +     G       I+ E           
Sbjct: 297 TNYDLSVHMNLSKK-DLTYFDEETKQKYIPHVIEPSVGVERLLYAILTEATFIEKLANDE 355

Query: 544 ----GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
                NL   L+P +  V  + +   E A+ + N +   ++S+  D    +I  + R   
Sbjct: 356 ERILMNLKYDLAPYKIAVMPLVNKLKEKAEAVYNKILDLNISVTFDNSG-SIGKRYRRQD 414

Query: 600 IKKIPIIIIC-----GDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
                  I       GD+   + +  IR   +   +++ L +    L++++
Sbjct: 415 AIGTIYCITIDYDSFGDE--HDPTFTIRERNTMAQKRIKLSELSLYLSQKA 463


>gi|112359364|gb|ABI15602.1| uridine kinase [Spironucleus barkhanus]
          Length = 616

 Score = 77.5 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 48/269 (17%), Positives = 95/269 (35%), Gaps = 32/269 (11%)

Query: 16  NFPVHATGSDV---AESISRSLAKK--AVAVAINGKVCDLSDPVREGS-IEIITPEDPRS 69
             P      DV      I    +K     A  +N ++  LSD ++  S I+++ P+    
Sbjct: 14  EIPSGTRIYDVIMQYPDIFPPNSKNLSPTAATMNNELVSLSDKIQITSHIQLVYPDTVSG 73

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYY------------------DFDKE 111
            ++ R S   ++  A  +I P  Q+ I   I   FY+                  +    
Sbjct: 74  SSIYRKSLVFLLQMAWNNICPARQLTISHSIGHAFYFKEVCQNDTIVIESSDLQGEMTTP 133

Query: 112 QPFSSD----ELAQIEKKMQEIIARDSPF-LKQYLSHEKARELFESKKEAYKVEILESIP 166
            P  +     E   I+K+MQ +I ++ P   ++ +S E   ++  ++ +    +++ S  
Sbjct: 134 APKHNSIDHIEFDMIKKEMQNLIKQNLPILTRKPISSENIIQILTNQAQPESADVVRSKN 193

Query: 167 AKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWN 226
                T  + G ++ L   P V +TG +K++  LM          S+            +
Sbjct: 194 ENRVFTS-QCGNYYQLMHTPLVPTTGSLKQYRLLMIEDMIVIVYPSHTN--HFEIPEFQH 250

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDL 255
                  Y      S+      L +   +
Sbjct: 251 NATIHQLYQENQNWSKVLKVSSLGQLNAI 279


>gi|21911052|ref|NP_665320.1| seryl-tRNA synthetase [Streptococcus pyogenes MGAS315]
 gi|28895262|ref|NP_801612.1| seryl-tRNA synthetase [Streptococcus pyogenes SSI-1]
 gi|30173169|sp|Q8K635|SYS_STRP3 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|21905261|gb|AAM80123.1| putative seryl-tRNA synthetase [Streptococcus pyogenes MGAS315]
 gi|28810508|dbj|BAC63445.1| putative seryl-tRNA synthetase [Streptococcus pyogenes SSI-1]
          Length = 425

 Score = 77.5 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 43/243 (17%), Positives = 93/243 (38%), Gaps = 21/243 (8%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIF 276
           G       E+ ++    +   E + H  L  ++D+          G+  +F+   G ++ 
Sbjct: 115 GADEEDNVEIRRWGTPRDFDFEVKAHWDLGEDLDILDWERGAKVTGARFLFYKNLGARLE 174

Query: 277 QTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFA 335
           + L ++M    IK+ Y+EI TP +++      +G +  ++ + F +   +        F 
Sbjct: 175 RALYNFMLDEHIKEGYQEIITPYMVNHDSMFGTGQYPKFKEDTFELADTN--------FV 226

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAH 392
           L P         +   +   +ELP+        +R+E   +     GL+R+  F + +  
Sbjct: 227 LIPTAEVPLTNYYRGEILDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMV 286

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIM 448
            F   E+ + E  K+     +I +  G    ++ L T              +W  A+N  
Sbjct: 287 KFAKPEESYQELEKMTANAENILQKLGLPYRVISLCTGDMGFSAAKTYDLEVWIPAQNTY 346

Query: 449 KGV 451
           + +
Sbjct: 347 REI 349


>gi|330835872|ref|YP_004410600.1| histidyl-tRNA synthetase [Metallosphaera cuprina Ar-4]
 gi|329568011|gb|AEB96116.1| histidyl-tRNA synthetase [Metallosphaera cuprina Ar-4]
          Length = 431

 Score = 77.5 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 73/420 (17%), Positives = 148/420 (35%), Gaps = 64/420 (15%)

Query: 276 FQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
            + + +  R  ++   Y E  TP V +  L+                       K  R  
Sbjct: 21  IRKVETIFREVVEKAGYSEAITPVVEEFELFSVK------GGEELRKTMYVFKDKGDREV 74

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           AL+P   P  V ++ + L+ + + P+R+   G VYR +       L R R F Q    V 
Sbjct: 75  ALRPEITPSIVRLYLNSLQHFPK-PLRIFYVGRVYRYDEP----QLGRYREFRQAGVEVL 129

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR---VGSDALWDDAENIMKGV 451
            T+  +    L++ +L+   Y+  G +  +                  + D+ +  +  +
Sbjct: 130 GTESILAE--LEMFHLLNDFYRKIGLKDNVEFKINNIGIYRKIFDYIKIDDNLQEHVLHL 187

Query: 452 LDTIK----NSSQDRIN-----------------TGVLLGEGAFYGPKFEYI-LKDAIGR 489
           LD  K     S+ +RI                    V + E   Y  K +   LK  I +
Sbjct: 188 LDKGKINEFYSTLERIPIQNSKIMDLLEILTKNGKSVKIEELIAYIDKIDIPELKIEIEK 247

Query: 490 DWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHR------------------AVFGSI 531
                 +     +    +  +V   +    P+                       ++G  
Sbjct: 248 ISLISDVLSSLGINYLIDLSFVRGLAYYTGPIFEVTKKGLPFSIAGGGRYDSLVEIYGGS 307

Query: 532 ERF---IGIMIE---NFKGNLPLWLSPIQ-AIVTTITSSAVEYAQEIANLLKSHHLSIET 584
           +       I IE   +   N+ L   P+    V T+ + A++ A EIA++L+ +      
Sbjct: 308 KTPAIGFAIGIERTVHALENILLRKEPVHLIAVITLDNLAIKKALEIASILRENGYVTTL 367

Query: 585 DFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           + ++ +++  I  ++ +    +II G KE     + +R   +   + V++ + I +L  +
Sbjct: 368 NNKDLSLSKLISLYADQGYTHVIIIGKKELENEKVTVRNLKTREQRLVNISELIRVLNSD 427


>gi|329964612|ref|ZP_08301666.1| glycine--tRNA ligase [Bacteroides fluxus YIT 12057]
 gi|328525012|gb|EGF52064.1| glycine--tRNA ligase [Bacteroides fluxus YIT 12057]
          Length = 513

 Score = 77.5 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 55/345 (15%), Positives = 113/345 (32%), Gaps = 54/345 (15%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    + +  K+   ++P  +A+ G  +RNE  
Sbjct: 194 FNLMFSTEMGSTADGAMKIYLRPETAQGIFVNYLNVQKTGRMKIPFGIAQIGKAFRNEIV 253

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
            +   + R+R F Q +   F     E  + +  K   L       FG +        +  
Sbjct: 254 -ARQFIFRMREFEQMEMQFFVKPGTELDWFKAWKETRLKWHKALGFGDDHYRYHDHDKLA 312

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
                    + A +I            +  +  G    EG      F+            
Sbjct: 313 HYA------NAATDI------------EFLMPFGFKEVEGIHSRTNFD------------ 342

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM--------IENFKG 544
              +        +   ++    +E   P +I  ++ G    F+ IM        +EN + 
Sbjct: 343 ---LSQHEKFSGKNIKYFDPETNESYTPYVIETSI-GVDRMFLSIMSASYCEEKLENGET 398

Query: 545 NL----PLWLSPIQAIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
            +    P  L+P++  V  +       E A+EI + LK  H   + D ++ +I  + R  
Sbjct: 399 RVVLRLPAALAPVKLAVMPLVKKDGLPEKAREIIDSLK-FHFHCQYDEKD-SIGKRYRRQ 456

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
                P  +    +   +  + +R   +   ++V++ +   I+  
Sbjct: 457 DAIGTPYCVTVDHQTLEDNCVTLRNRDTMEQERVAISELNNIIAD 501


>gi|94989115|ref|YP_597216.1| seryl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
 gi|94993007|ref|YP_601106.1| seryl-tRNA synthetase [Streptococcus pyogenes MGAS2096]
 gi|166223295|sp|Q1JA99|SYS_STRPB RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|166223296|sp|Q1JKF1|SYS_STRPC RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|94542623|gb|ABF32672.1| seryl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
 gi|94546515|gb|ABF36562.1| Seryl-tRNA synthetase [Streptococcus pyogenes MGAS2096]
          Length = 425

 Score = 77.5 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 43/243 (17%), Positives = 94/243 (38%), Gaps = 21/243 (8%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIF 276
           G       E+ ++    + + E + H  L  ++D+          G+  +F+   G ++ 
Sbjct: 115 GADEEDNVEIRRWGTPRDFNFEVKAHWDLGEDLDILDWERGAKVTGARFLFYKNLGARLE 174

Query: 277 QTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFA 335
           + L ++M    IK+ Y+EI TP +++      +G +  ++ + F +   +        F 
Sbjct: 175 RALYNFMLDEHIKEGYQEIITPYMVNHDSMFGTGQYPKFKEDTFELADTN--------FV 226

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAH 392
           L P         +   +   +ELP+        +R+E   +     GL+R+  F + +  
Sbjct: 227 LIPTAEVPLTNYYRGEILDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMV 286

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIM 448
            F   E+ + E  K+     +I +  G    ++ L T              +W  A+N  
Sbjct: 287 KFAKPEESYQELEKMTANAENILQKLGLPYRVISLCTGDMGFSAAKTYDLEVWIPAQNTY 346

Query: 449 KGV 451
           + +
Sbjct: 347 REI 349


>gi|256832756|ref|YP_003161483.1| glycyl-tRNA synthetase [Jonesia denitrificans DSM 20603]
 gi|256686287|gb|ACV09180.1| glycyl-tRNA synthetase [Jonesia denitrificans DSM 20603]
          Length = 461

 Score = 77.5 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 59/385 (15%), Positives = 117/385 (30%), Gaps = 62/385 (16%)

Query: 276 FQTLISYMRRKIKDDYEEINTPQVLDQHLWQQ----SGHWDSYRANMFAVKCADDTIKDL 331
            Q    Y + +     +EI       +  W +    SG   +Y               + 
Sbjct: 105 LQEEFEYKKGRAPQSMDEIGCANCGKKGEWTEPQNFSGLLKTY---------LGPVDNEQ 155

Query: 332 RTFALKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
               L+P    G    F +    S  + P  + + G  +RNE +   + + R R F Q +
Sbjct: 156 GLHYLRPETAQGIFVNFANVQTASRLKPPFGIGQIGKSFRNEITPG-NFIFRTREFEQME 214

Query: 391 AHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKG 450
              F           +  +   + Y D G     ++L   P+         +   +  K 
Sbjct: 215 LEFFVKPGTDEEWHQRWIDARKAWYVDLGINPDNLRLYEHPQ---------EKLSHYSKR 265

Query: 451 VLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFY 510
            +D            G L G            + +    D +  T     +L      F+
Sbjct: 266 TVDIEYRFGFTGGEWGELEG------------VANRTDYDLRTHTEHSGKDLS-----FF 308

Query: 511 VNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----------------LPLWLSPIQ 554
             +   +  P +I     G     +  ++E +  +                L   L+P++
Sbjct: 309 DQAEGTRYFPYVIE-PAAGLTRSVMAFLVEAYTEDEAPNAKGGVDKRTVLRLDPRLAPVK 367

Query: 555 AIVTTITSSAV--EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
             V  ++ +A     A+++A  L+    +++ D     I  + R       P  I     
Sbjct: 368 VAVLPLSRNADLSPKARDLAADLRQF-WNVDFDDAGA-IGRRYRRQDEIGTPFCITVDFD 425

Query: 613 EASERSIGIRRFGSTTTQKVSLLDA 637
              + ++ IR   S    +V+L   
Sbjct: 426 TLEDNAVTIRHRDSMEQHRVALDQV 450


>gi|171920436|ref|ZP_02931750.1| glycyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC
           27813]
 gi|183508559|ref|ZP_02958077.1| glycyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC
           33697]
 gi|171902885|gb|EDT49174.1| glycyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC
           27813]
 gi|182676001|gb|EDT87906.1| glycyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC
           33697]
          Length = 473

 Score = 77.5 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 54/351 (15%), Positives = 111/351 (31%), Gaps = 55/351 (15%)

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR-ELPVRLAEFGSVYRNEP 373
             N+                 L+P    G    F +  +S R  LP  +A+ G  +RNE 
Sbjct: 148 HFNLMFKTHQGVIEDPKNIVYLRPETAQGIFVNFKNVQRSMRLHLPFGIAQIGKSFRNEI 207

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
           +   + + R R F Q +   F  +E  ++   K  N I +         +         +
Sbjct: 208 TPG-NFIFRTREFEQMEIEFFLKEETAYDVFDKYLNQIQNWLVTCCGLDLNNLRKHEHPR 266

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA--FYGPKFEYILKDAIGRDW 491
                              + + + S+  I+       G    YG  +            
Sbjct: 267 -------------------EELSHYSKKTIDFEYNFLHGFSELYGIAY-----------R 296

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK-------- 543
               + V  NL  + +  Y +  +++ +   +     G       I+ E           
Sbjct: 297 TNYDLSVHMNLSKK-DLTYFDEETKQKYIPHVIEPSVGVERLLYAILTEATFIEKLANDE 355

Query: 544 ----GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
                NL   L+P +  V  + +   E A+ + N +   ++S+  D    +I  + R   
Sbjct: 356 ERILMNLKYDLAPYKIAVMPLVNKLKEKAEAVYNKILDLNVSVTFDNSG-SIGKRYRRQD 414

Query: 600 IKKIPIIIIC-----GDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
                  I       GD+   + +  IR   +   +++ L +    L++++
Sbjct: 415 AIGTIYCITIDYDSFGDE--HDPTFTIRERNTMAQKRIKLSELSLYLSQKA 463


>gi|196247599|ref|ZP_03146301.1| Anticodon-binding domain protein [Geobacillus sp. G11MC16]
 gi|196212383|gb|EDY07140.1| Anticodon-binding domain protein [Geobacillus sp. G11MC16]
          Length = 298

 Score = 77.5 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 61/163 (37%), Gaps = 11/163 (6%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G +  +        NA Y++ +      +M    +   + R +  + E F     
Sbjct: 135 RGIEVGHVFKLGTKYSEAMNAVYLDENGRTQTMIMGCYGI--GVSRLVAAIAEQFADENG 192

Query: 546 --LPLWLSPIQAIVTTITSSAVEY---AQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              P+ ++P    + T  + + E    A+E    L      +  D R E    K  +  +
Sbjct: 193 LVWPVSVAPFHVHLLTANAKSDEQRMLAEEWYEKLGQAGFDVLYDDRPERAGVKFADSDL 252

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             IP+ +  G + ASE  + ++   +  T  V + + I  + +
Sbjct: 253 IGIPLRVTVGKR-ASEGVVEVKVRKTGETFDVPVGELIETVRR 294


>gi|160887863|ref|ZP_02068866.1| hypothetical protein BACUNI_00266 [Bacteroides uniformis ATCC 8492]
 gi|270295531|ref|ZP_06201732.1| glycyl-tRNA synthetase [Bacteroides sp. D20]
 gi|156862693|gb|EDO56124.1| hypothetical protein BACUNI_00266 [Bacteroides uniformis ATCC 8492]
 gi|270274778|gb|EFA20639.1| glycyl-tRNA synthetase [Bacteroides sp. D20]
          Length = 513

 Score = 77.5 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 54/345 (15%), Positives = 111/345 (32%), Gaps = 54/345 (15%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    + +  K+   ++P  +A+ G  +RNE  
Sbjct: 194 FNLMFSTEMGSTADGAMKIYLRPETAQGIFVNYLNVQKTGRMKIPFGIAQIGKAFRNEIV 253

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
            +   + R+R F Q +   F     E  + +  K   L       FG +        +  
Sbjct: 254 -ARQFIFRMREFEQMEMQFFVKPGTELDWFKSWKATRLKWHKALGFGDDHYRYHDHDKLA 312

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
                    + A +I            +  +  G    EG      F+            
Sbjct: 313 HYA------NAATDI------------EFLMPFGFKEVEGIHSRTNFD------------ 342

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF---------- 542
              +        +   ++    +E   P +I  ++ G    F+ IM  ++          
Sbjct: 343 ---LSQHEKFSGKNIKYFDPETNESYTPYVIETSI-GVDRMFLSIMSASYCEETLDSGES 398

Query: 543 --KGNLPLWLSPIQAIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
                LP  L+P++  V  +       E A+EI + LK  H   + D ++ +I  + R  
Sbjct: 399 RVVLKLPAALAPVKLAVMPLVKKDGLPEKAREIIDNLK-FHFHCQYDEKD-SIGKRYRRQ 456

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
                P  +    +   +  + +R   +   ++V++ +   I+  
Sbjct: 457 DAIGTPYCVTVDHQTLEDNCVTLRNRDTMQQERVAISELNNIIAD 501


>gi|187736261|ref|YP_001878373.1| glycyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835]
 gi|187426313|gb|ACD05592.1| glycyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835]
          Length = 525

 Score = 77.5 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 58/324 (17%), Positives = 112/324 (34%), Gaps = 43/324 (13%)

Query: 336 LKPMNCPGHVAVFNHGLKSYR-ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           L+P         + + L S R +LP  +A+ G  +RNE +   +   R R F Q +   F
Sbjct: 222 LRPETAQSIFCQYKNILDSSRVKLPFGIAQIGKSFRNEINPR-NFTFRSREFEQMEIEYF 280

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDT 454
           C  E       +     +  Y + G  +  + +   P+   G  A +      +      
Sbjct: 281 CRPEDGLRLVDEWLEHRLCFYDEVGVPREHIHILDVPD---GERAFYSKKTYDL------ 331

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKFEYIL-KDAIGRDWQCGTIQVDFNLPSRFNAFYVNS 513
                +     G+   EG  Y   ++    +   GR  +      D     +F   +V  
Sbjct: 332 -----EYEFPFGIQELEGIAYRTDYDLSCHQKGSGRPLE----YFDEETREKF-IPHVVE 381

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-------LPLWLSPIQAIVTTI---TSS 563
            S  C   ++        E     ++++               ++PI+A +  +      
Sbjct: 382 PSAGCDRTILAIICEAYDEEE---LVDDKGKKDVRTVLRFVPRMAPIKAAIFPLLKKNGE 438

Query: 564 AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIIC-----GDKEAS-ER 617
            V  A+EI   L+   +S+  D     +  + R       P  I       G+ +AS + 
Sbjct: 439 QVRIAREIEKTLQP-WMSVFYDETGA-VGRRYRRQDEVGTPFCITVDFETLGENDASLKG 496

Query: 618 SIGIRRFGSTTTQKVSLLDAIPIL 641
           ++ IR   S   ++V++ D +  L
Sbjct: 497 TVTIRHRDSMKQERVAIEDLLHWL 520


>gi|71904134|ref|YP_280937.1| seryl-tRNA synthetase [Streptococcus pyogenes MGAS6180]
 gi|123639382|sp|Q48RS8|SYS_STRPM RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|71803229|gb|AAX72582.1| seryl-tRNA synthetase [Streptococcus pyogenes MGAS6180]
          Length = 425

 Score = 77.5 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 43/243 (17%), Positives = 93/243 (38%), Gaps = 21/243 (8%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIF 276
           G       E+ ++    +   E + H  L  ++D+          G+  +F+   G ++ 
Sbjct: 115 GADEEDNVEIRRWGTPRDFDFEVKAHWDLGEDLDILDWERGAKVTGARFLFYKNLGARLE 174

Query: 277 QTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFA 335
           + L ++M    IK+ Y+EI TP +++      +G +  ++ + F +   +        F 
Sbjct: 175 RALYNFMLDEHIKEGYQEIITPYMVNHDSMFGTGQYPKFKEDTFELADTN--------FV 226

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAH 392
           L P         +   +   +ELP+        +R+E   +     GL+R+  F + +  
Sbjct: 227 LIPTAEVPLTNYYRGEILDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMV 286

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIM 448
            F   E+ + E  K+     +I +  G    ++ L T              +W  A+N  
Sbjct: 287 KFAKPEESYQELEKMTANAENILQKLGLPYRVISLCTGDMGFSAAKTYDLEVWIPAQNTY 346

Query: 449 KGV 451
           + +
Sbjct: 347 REI 349


>gi|94994938|ref|YP_603036.1| seryl-tRNA synthetase [Streptococcus pyogenes MGAS10750]
 gi|166223298|sp|Q1J594|SYS_STRPF RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|94548446|gb|ABF38492.1| Seryl-tRNA synthetase [Streptococcus pyogenes MGAS10750]
          Length = 425

 Score = 77.5 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 43/243 (17%), Positives = 93/243 (38%), Gaps = 21/243 (8%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIF 276
           G       E+ ++    +   E + H  L  ++D+          G+  +F+   G ++ 
Sbjct: 115 GADEEDNVEIRRWGTPRDFDFEVKAHWDLGEDLDILDWERGAKVTGARFLFYKNLGARLE 174

Query: 277 QTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFA 335
           + L ++M    IK+ Y+EI TP +++      +G +  ++ + F +   +        F 
Sbjct: 175 RALYNFMLDEHIKEGYQEIITPYMVNHDSMFGTGQYPKFKEDTFELADTN--------FV 226

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAH 392
           L P         +   +   +ELP+        +R+E   +     GL+R+  F + +  
Sbjct: 227 LIPTAEVPLTNYYRGEILDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMV 286

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIM 448
            F   E+ + E  K+     +I +  G    ++ L T              +W  A+N  
Sbjct: 287 KFAKPEESYQELEKMTANAENILQKLGLPYRVISLCTGDMGFSAAKTYDLEVWIPAQNTY 346

Query: 449 KGV 451
           + +
Sbjct: 347 REI 349


>gi|15675591|ref|NP_269765.1| seryl-tRNA synthetase [Streptococcus pyogenes M1 GAS]
 gi|71911296|ref|YP_282846.1| seryl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
 gi|306826795|ref|ZP_07460097.1| serine--tRNA ligase [Streptococcus pyogenes ATCC 10782]
 gi|30173206|sp|Q99YE2|SYS_STRP1 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|13622796|gb|AAK34486.1| putative seryl-tRNA synthetase [Streptococcus pyogenes M1 GAS]
 gi|71854078|gb|AAZ52101.1| seryl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
 gi|304431084|gb|EFM34091.1| serine--tRNA ligase [Streptococcus pyogenes ATCC 10782]
          Length = 425

 Score = 77.5 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 43/243 (17%), Positives = 93/243 (38%), Gaps = 21/243 (8%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIF 276
           G       E+ ++    +   E + H  L  ++D+          G+  +F+   G ++ 
Sbjct: 115 GADEEDNVEIRRWGTPRDFDFEVKAHWDLGEDLDILDWERGAKVTGARFLFYKNLGARLE 174

Query: 277 QTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFA 335
           + L ++M    IK+ Y+EI TP +++      +G +  ++ + F +   +        F 
Sbjct: 175 RALYNFMLDEHIKEGYQEIITPYMVNHDSMFGTGQYPKFKEDTFELADTN--------FV 226

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAH 392
           L P         +   +   +ELP+        +R+E   +     GL+R+  F + +  
Sbjct: 227 LIPTAEVPLTNYYRGEILDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMV 286

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIM 448
            F   E+ + E  K+     +I +  G    ++ L T              +W  A+N  
Sbjct: 287 KFAKPEESYQELEKMTANAENILQKLGLPYRVISLCTGDMGFSAAKTYDLEVWIPAQNTY 346

Query: 449 KGV 451
           + +
Sbjct: 347 REI 349


>gi|19746699|ref|NP_607835.1| seryl-tRNA synthetase [Streptococcus pyogenes MGAS8232]
 gi|50914823|ref|YP_060795.1| seryl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
 gi|30173174|sp|Q8NZN7|SYS_STRP8 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|67461685|sp|Q5XAF1|SYS_STRP6 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|19748923|gb|AAL98334.1| putative seryl-tRNA synthetase [Streptococcus pyogenes MGAS8232]
 gi|50903897|gb|AAT87612.1| Seryl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
          Length = 425

 Score = 77.5 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 43/243 (17%), Positives = 93/243 (38%), Gaps = 21/243 (8%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIF 276
           G       E+ ++    +   E + H  L  ++D+          G+  +F+   G ++ 
Sbjct: 115 GADEEDNVEIRRWGTPRDFDFEVKAHWDLGEDLDILDWERGAKVTGARFLFYKNLGARLE 174

Query: 277 QTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFA 335
           + L ++M    IK+ Y+EI TP +++      +G +  ++ + F +   +        F 
Sbjct: 175 RALYNFMLDEHIKEGYQEIITPYMVNHDSMFGTGQYPKFKEDTFELADTN--------FV 226

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAH 392
           L P         +   +   +ELP+        +R+E   +     GL+R+  F + +  
Sbjct: 227 LIPTAEVPLTNYYRGEILDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMV 286

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIM 448
            F   E+ + E  K+     +I +  G    ++ L T              +W  A+N  
Sbjct: 287 KFAKPEESYQELEKMTANAENILQKLGLPYRVISLCTGDMGFSAAKTYDLEVWIPAQNTY 346

Query: 449 KGV 451
           + +
Sbjct: 347 REI 349


>gi|224026479|ref|ZP_03644845.1| hypothetical protein BACCOPRO_03236 [Bacteroides coprophilus DSM
           18228]
 gi|224019715|gb|EEF77713.1| hypothetical protein BACCOPRO_03236 [Bacteroides coprophilus DSM
           18228]
          Length = 514

 Score = 77.5 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 57/343 (16%), Positives = 112/343 (32%), Gaps = 50/343 (14%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    + +  K+   ++P  +A+ G  +RNE  
Sbjct: 195 FNLMFTTEMGSTADGAMKVYLRPETAQGIFVNYLNVQKTGRMKIPFGIAQIGKAFRNEIV 254

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
            +   + R+R F Q +   F           K     +  +K  GF     +     +  
Sbjct: 255 -ARQFIFRMREFEQMEMQFFVKPGTELEWFKKWKETRLKWHKALGFGDDHYRYHDHEKLA 313

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
             ++A  D                 +  +  G    EG      F+              
Sbjct: 314 HYANAATDI----------------EFLMPFGFKEVEGIHSRTNFD-------------- 343

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM--------IENFKG-- 544
            +        +   ++    +E   P +I  ++ G    F+ IM        +EN +   
Sbjct: 344 -LSQHEKFSGKSIKYFDPEINESYTPYVIETSI-GVDRMFLSIMSAAYCEETLENGETRV 401

Query: 545 --NLPLWLSPIQAIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              LP  L+P++  V  +       E A+EI N LK  H   + D ++ +I  + R    
Sbjct: 402 VLKLPAALAPVKLAVMPLVKKDGLPEKAREIMNDLK-FHFHCQYDEKD-SIGKRYRRQDA 459

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              P  I    +   +  + +R   +   ++V++ +   I+  
Sbjct: 460 IGTPYCITIDHQTLEDNCVTLRNRDTMKQERVAISELNNIIAD 502


>gi|332670830|ref|YP_004453838.1| glycyl-tRNA synthetase [Cellulomonas fimi ATCC 484]
 gi|332339868|gb|AEE46451.1| glycyl-tRNA synthetase [Cellulomonas fimi ATCC 484]
          Length = 461

 Score = 77.5 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 60/389 (15%), Positives = 118/389 (30%), Gaps = 57/389 (14%)

Query: 277 QTLISYMRRKIKD---DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           Q +  +  RK          +N P    +  W +         NM           +   
Sbjct: 103 QLVEEFEERKGHAPEGGLAGVNCPNCGTKGQWTEPR-----DFNMMLKTYLGPVEDESGL 157

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELP-VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
             L+P    G    F +   + R  P   + + G  +RNE +   + + R R F Q +  
Sbjct: 158 HYLRPETAQGIFVNFKNVYTAARMRPPFGIGQIGKSFRNEITPG-NFIFRTREFEQMEME 216

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
            F              +     Y D G ++  ++L   P          +   +  K  +
Sbjct: 217 FFVEPGTDETWHQYWIDTRTDWYVDLGLDRDNLRLYEHPA---------EKLSHYSKRTV 267

Query: 453 DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
           D            G L G            + +    D    +     +L      F+  
Sbjct: 268 DIEYRFGFQGSEWGELEG------------IANRTDFDLGTHSEHSGQDLS-----FFDQ 310

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIENFK----------------GNLPLWLSPIQAI 556
           + +E+  P +I     G     +  ++E +                   L   L+P++A 
Sbjct: 311 AKNERYVPYVIE-PAAGLTRSLMAFLVEAYAEDEAPNTKGGVDKRVVLKLDPRLAPVKAA 369

Query: 557 VTTIT--SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
           V  ++        A+++A  L+    ++E D     I  + R       P  I       
Sbjct: 370 VLPLSRNEQLSPKARDLAAELRRS-WNVEFDDAGA-IGRRYRRQDEIGTPFCITVDFDTL 427

Query: 615 SERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            ++++ IR     + ++V+L      L +
Sbjct: 428 EDQAVTIRHRDDMSQERVALDKVTGYLAQ 456


>gi|222529399|ref|YP_002573281.1| glycyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
 gi|222456246|gb|ACM60508.1| glycyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
          Length = 434

 Score = 77.5 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 69/450 (15%), Positives = 148/450 (32%), Gaps = 91/450 (20%)

Query: 251 REMDLFH---IAEDGSGVIFWHRKGWKIFQTLISYMRR---KIKDDYEEINTPQVLDQHL 304
           R   +F    I    +    +   G ++   +     +   +++DD   +++  +++  +
Sbjct: 13  RRGFIFQSSEIYGGLNSCWDYGPLGVEMKNNIKRLWWKANVQLRDDVVGLDSSILMNPKV 72

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA---VFNHGLKSY------ 355
           W+ SGH  ++   M   K      +  +    K   C G +    +FN   K++      
Sbjct: 73  WEASGHLSNFSDPMADCKLCKKRWRVDQLQEYKCPECGGELTEARMFNLMFKTFMGPVED 132

Query: 356 ---------------------------RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQ 388
                                      +++P  +A+ G  +RNE +   + + R R F Q
Sbjct: 133 ESAVVYLRPETAQGIFVNFVNVQQTMRKKIPFGIAQIGKSFRNEITPG-NFIFRTREFEQ 191

Query: 389 DDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIM 448
            +   F                 I+ Y + G  K  +++        G D L   A+  +
Sbjct: 192 MEIEYFVKPGTDEYWHKHWIEQRINWYYNLGIRKENLRVREH-----GKDELAHYAKACV 246

Query: 449 K-GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFN 507
               L  +  S  + I              + ++ L                    S  N
Sbjct: 247 DIEYLFPMGWSELEGI------------ANRTDFDLT--------------QHQKYSGEN 280

Query: 508 AFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK------------GNLPLWLSPIQA 555
             Y +  +++ +   +     G     +  +I+ ++             +L   +SP++A
Sbjct: 281 LTYFDDETKQRYIPYVIEPSAGVDRSLLAFLIDAYEYQQIDKDDFRVVLHLHPAISPVKA 340

Query: 556 IV--TTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
            V         V+ A+EI N LK   + ++ D    +I  + R       P  I    + 
Sbjct: 341 AVFPLMKKEELVKKAREIYNELKYKWI-VQYDESG-SIGKRYRRQDEIGTPFGITVDYQT 398

Query: 614 ASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             + ++ IR   +    +V + + IP L +
Sbjct: 399 LEDETVTIRDRDTMEQIRVHIKEIIPYLEE 428


>gi|154493369|ref|ZP_02032689.1| hypothetical protein PARMER_02706 [Parabacteroides merdae ATCC
           43184]
 gi|154086579|gb|EDN85624.1| hypothetical protein PARMER_02706 [Parabacteroides merdae ATCC
           43184]
          Length = 514

 Score = 77.5 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 60/345 (17%), Positives = 112/345 (32%), Gaps = 54/345 (15%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    F +  K+   ++P  +A+ G  +RNE  
Sbjct: 194 FNLMFSTEMGSTSDGAMKVYLRPETAQGIFVNFLNVQKTGRMKIPFGIAQIGKAFRNEIV 253

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
            +   + R+R F Q +   F     E  + +  K   L        G EK       +  
Sbjct: 254 -ARQFIFRMREFEQMEMQFFVRPGEEMEWFKQWKATRLKWHQAMGLGNEKYRYHDHEKLA 312

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
                    + A +I            +  +  G    EG      F+     +    + 
Sbjct: 313 HYA------NAATDI------------EFEMPFGFKEVEGIHSRTNFDL----SQHEKFS 350

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM--------IENFKG 544
              IQ                 ++   P +I  ++ G    F+ +M        +EN + 
Sbjct: 351 GKKIQYFD-----------PELNQSYTPYVIETSI-GVDRVFLSVMAGSYCEETLENGET 398

Query: 545 ----NLPLWLSPIQAIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
                LP  L+PI+  V  +       E A+EI  +L+      + D ++ +I  + R  
Sbjct: 399 RVVLKLPAALAPIKLAVLPLVKKDGLPEKAEEIMKMLR-FDFRCQYDEKD-SIGKRYRRQ 456

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
                P  I        +  + IR   +   ++VS+     I+++
Sbjct: 457 DAIGTPYCITVDHDTLKDNCVTIRFRDTMEQERVSIDKLHDIISE 501


>gi|270283990|ref|ZP_05965365.2| glycine--tRNA ligase [Bifidobacterium gallicum DSM 20093]
 gi|270277876|gb|EFA23730.1| glycine--tRNA ligase [Bifidobacterium gallicum DSM 20093]
          Length = 544

 Score = 77.5 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 59/389 (15%), Positives = 119/389 (30%), Gaps = 57/389 (14%)

Query: 277 QTLISYMRRKIK----DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           + + SY  +       +  ++I  P    +  W +         NM           +  
Sbjct: 155 KLVESYAEKHGDQLPENGLKDIVCPNCGTRGNWTEPR-----DFNMMLRTNLGPVEDENS 209

Query: 333 TFALKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
              L+P    G    F +    S  + P  +A  G  +RNE +   + + R R F Q + 
Sbjct: 210 LHYLRPETAQGIFVDFKNVMTSSRMKPPFGIANTGKSFRNEITPG-NFIFRTREFEQMEM 268

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
             F    Q  +      +     Y D G +   ++    P+         +   +  K  
Sbjct: 269 EFFVAPGQDEDWHQYWIDARTQWYLDLGIKAENLRHYEHPK---------EKLAHYSKRT 319

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
           +D          + G L G            + +    D          +L     A++ 
Sbjct: 320 VDIEYKFGFQGSDWGELEG------------VANRTDFDLSAHAEHSGEDL-----AYFN 362

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFK----------------GNLPLWLSPIQA 555
            +  EK  P +I     G     +  +++ F                   L   L+P +A
Sbjct: 363 QATGEKFIPYVIE-PAAGLSRSLMAFLVDAFDVDEAPNTKGGVDKRTVLRLDPRLAPYKA 421

Query: 556 IVTTITSSAV--EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
            V  ++        A  +A  L+ +   ++ D     I  + R       P+ I      
Sbjct: 422 AVLPLSKKPELQSVAHNLAADLRLNDWMVDYDESGA-IGRRYRRQDEIGTPLCITVDFDT 480

Query: 614 ASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             ++++ IR   +   ++V+L +    + 
Sbjct: 481 LEDQAVTIRERDTMQQERVALDNVAAYVR 509


>gi|315282168|ref|ZP_07870635.1| prolyl-tRNA synthetase [Listeria marthii FSL S4-120]
 gi|313614185|gb|EFR87862.1| prolyl-tRNA synthetase [Listeria marthii FSL S4-120]
          Length = 252

 Score = 77.5 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 77/217 (35%), Gaps = 20/217 (9%)

Query: 444 AENIMKGVLDTIKNSSQDRINT-GVLLGEGAFYGPKFEYIL-------KDAIGRDWQCGT 495
           A+N +K +++ +  +++D  +   V           F+  +        D  G       
Sbjct: 30  ADNAVKDIVNAVAGANEDGFHYINVNPDRDFTVTSYFDLRMIQVGDLSPDGQGVIKFAEG 89

Query: 496 IQVDFNLPSRFN-----AFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW- 549
           I+V      R          +   + +  P+++     G       I  ++   N  +W 
Sbjct: 90  IEVGHIFKLRTKYSQAMNATILDENGRAQPIIMGCYGIGVSRILSAIAEQSNDENGFVWD 149

Query: 550 --LSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             +SP    +  +   +   V +A+ +   L+    S+  D R E    K  +  +  +P
Sbjct: 150 KQISPFDLHLIPVNMKSEEQVAFAETLYTSLQGAGFSVLIDDRAERAGVKFADADLIGLP 209

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           I I  G K A+E  + ++   +    +V   + +  L
Sbjct: 210 IRITVGKK-AAEGVVEVKIRKTGEMIEVRQDELLNTL 245


>gi|13358056|ref|NP_078330.1| glycyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|170762234|ref|YP_001752577.1| glycyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           27815]
 gi|11387150|sp|Q9PPZ7|SYG_UREPA RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|189082281|sp|B1AJD3|SYG_UREP2 RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|11271564|pir||D82884 glycyl-tRNA synthetase UU493 [imported] - Ureaplasma urealyticum
 gi|6899491|gb|AAF30905.1|AE002147_6 glycyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|168827811|gb|ACA33073.1| glycyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           27815]
          Length = 473

 Score = 77.5 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 55/351 (15%), Positives = 111/351 (31%), Gaps = 55/351 (15%)

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR-ELPVRLAEFGSVYRNEP 373
             N+                 L+P    G    F +  +S R  LP  +A+ G  +RNE 
Sbjct: 148 HFNLMFKTHQGVIEDPKNIVYLRPETAQGIFVNFKNVQRSMRLHLPFGIAQIGKSFRNEI 207

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
           +   + + R R F Q +   F  +E  ++   K  N I +         +         K
Sbjct: 208 TPG-NFIFRTREFEQMEIEFFLKEEIAYDVFDKYLNQIQNWLVTCCGLDLNNLRKHEHPK 266

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA--FYGPKFEYILKDAIGRDW 491
                              + + + S+  I+       G    YG  +            
Sbjct: 267 -------------------EELSHYSKKTIDFEYNFLHGFSELYGIAY-----------R 296

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK-------- 543
               + V  NL  + +  Y +  +++ +   +     G       I+ E           
Sbjct: 297 TNYDLSVHMNLSKK-DLTYFDEETKQKYIPHVIEPSVGVERLLYAILTEATFIEKLANDE 355

Query: 544 ----GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
                NL   L+P +  V  + +   E A+ + N +   ++S+  D    +I  + R   
Sbjct: 356 DRILMNLKYDLAPYKIAVMPLVNKLKEKAEAVYNKILDLNISVTFDNSG-SIGKRYRRQD 414

Query: 600 IKKIPIIIIC-----GDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
                  I       GD+   + +  IR   +   +++ L +    L++++
Sbjct: 415 AIGTIYCITIDYDSFGDE--HDPTFTIRERNTMAQKRIKLSELSLYLSQKA 463


>gi|255026350|ref|ZP_05298336.1| prolyl-tRNA synthetase [Listeria monocytogenes FSL J2-003]
          Length = 237

 Score = 77.5 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 36/218 (16%), Positives = 80/218 (36%), Gaps = 22/218 (10%)

Query: 444 AENIMKGVLDTIKNSSQDRINT-GVLLGEGAFYGPKFEYIL-------KDAIG-----RD 490
           A+N +K +++ +  +++D  +   V           F+  +        D  G       
Sbjct: 15  ADNAVKDIVNAVVGANEDGFHYINVNPDRDFSVTSYFDLRMIQVGDLSPDGQGVIKFAEG 74

Query: 491 WQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW 549
            + G I  +        NA  ++ +  +  P+++     G       I  ++   N  +W
Sbjct: 75  IEVGHIFKLGTKYSEAMNATILDENG-RAQPIIMGCYGIGVSRILSAIAEQSNDENGFVW 133

Query: 550 ---LSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
              +SP    +  +   +   V +A+ +   L+    S+  D R E    K  +  +  +
Sbjct: 134 DKQISPFDLHLIPVNMKSEEQVAFAETLYTSLQDAGFSVLIDDRAERAGVKFADADLIGL 193

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           PI I  G K A+E  + ++   +    +V   + +  L
Sbjct: 194 PIRITVGKK-AAEGVVEVKIRKTGEMIEVRQDELLNTL 230


>gi|255017946|ref|ZP_05290072.1| prolyl-tRNA synthetase [Listeria monocytogenes FSL F2-515]
          Length = 248

 Score = 77.5 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 36/218 (16%), Positives = 80/218 (36%), Gaps = 22/218 (10%)

Query: 444 AENIMKGVLDTIKNSSQDRINT-GVLLGEGAFYGPKFEYIL-------KDAIG-----RD 490
           A+N +K +++ +  +++D  +   V           F+  +        D  G       
Sbjct: 26  ADNAVKDIVNAVVGANEDGFHYINVNPDRDFSVTSYFDLRMIQVGDLSPDGQGVIKFAEG 85

Query: 491 WQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW 549
            + G I  +        NA  ++ +  +  P+++     G       I  ++   N  +W
Sbjct: 86  IEVGHIFKLGTKYSEAMNATILDENG-RAQPIIMGCYGIGVSRILSAIAEQSNDENGFVW 144

Query: 550 ---LSPIQAIVTTI---TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
              +SP    +  +   +   V +A+ +   L+    S+  D R E    K  +  +  +
Sbjct: 145 DKQISPFDLHLIPVNMKSEEQVAFAETLYTSLQDAGFSVLIDDRAERAGVKFADADLIGL 204

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           PI I  G K A+E  + ++   +    +V   + +  L
Sbjct: 205 PIRITVGKK-AAEGVVEVKIRKTGEMIEVRQDELLNTL 241


>gi|324998808|ref|ZP_08119920.1| glycyl-tRNA synthetase [Pseudonocardia sp. P1]
          Length = 468

 Score = 77.5 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 52/341 (15%), Positives = 106/341 (31%), Gaps = 49/341 (14%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPS 374
            NM           +     L+P    G    F +    S ++ P  + + G  +RNE +
Sbjct: 147 FNMMLKTFLGPVESEEGLHYLRPETAQGIFVNFLNVQTTSRKKPPFGIGQIGKSFRNEIT 206

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              + + R R F Q +   F              +     Y D G     ++     +  
Sbjct: 207 PG-NFIFRTREFEQMEMEYFVEPGSDEELHQYWIDERTRWYTDLGISPDNLRHYEHAK-- 263

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
                  +   +  K  +D     +      G L G            + +    D    
Sbjct: 264 -------EKLSHYSKRTVDIEYRFNFTGQEWGELEG------------IANRTDFDLTAH 304

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW----- 549
           +     +L      FY  +   +  P +I     G     +  +IE +  +         
Sbjct: 305 SNHSGVDLS-----FYDQATDTRYKPYVIE-PAAGVGRSMMAFLIEAYTEDEAPNAKGGV 358

Query: 550 -----------LSPIQAIVTTITSSAV--EYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                      L+P++A V  ++ +A     A+++A  L+ +  +++ D     I  + R
Sbjct: 359 DKRVVLKLDRRLAPVKAAVLPLSRNADLSPKAKDLAAQLRKN-WNVDFDDAGA-IGRRYR 416

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
                  P  I       +++++ IR   S   ++V+L   
Sbjct: 417 RQDEIGTPFCITVDFDTLTDQAVTIRERDSMAQERVALDQV 457


>gi|295094821|emb|CBK83912.1| alanyl-tRNA synthetase [Coprococcus sp. ART55/1]
          Length = 887

 Score = 77.5 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFS 115
              E+    + R+L    HS  H++  A++ +  +     G ++E G   +DF  +Q  +
Sbjct: 556 DEAELTVDAENRALICNNHSATHLLQRALKMVLGDHVEQAGSLVEPGRLRFDFSHDQAMT 615

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            +E+ ++E  + E I  D P     +S ++A+E         K          E V +  
Sbjct: 616 KEEIKKVEDIVNEQIQLDIPVCTDVMSVDEAKETGAMALFGEKY--------GEKVRVVS 667

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G++  +LC G HV STG +K F
Sbjct: 668 MGDFSKELCGGTHVASTGAIKTF 690


>gi|323348900|gb|EGA83137.1| YER087W-like protein [Saccharomyces cerevisiae Lalvin QA23]
          Length = 484

 Score = 77.5 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 62/153 (40%), Gaps = 10/153 (6%)

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
              E++   +  + LWQ +  W++  + +F +K +       + + L          +  
Sbjct: 6   GAIEVSLSAISSKALWQATDRWNN--SELFKLKDSK-----GKQYCLTATCEEDITDLMK 58

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
           + + SY+++P+ + +    YR+E      G++R R F   DA+ F + E+      +   
Sbjct: 59  NYIASYKDMPITIYQMTRKYRDEIRPR-GGILRGREFLMKDAYSFASNEEDAFASFQ--K 115

Query: 410 LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWD 442
           L  +  K F   KI    +      +G +   +
Sbjct: 116 LDDTYNKIFKDLKIPFVSAWADSGDIGGEFSKE 148



 Score = 41.7 bits (96), Expect = 0.45,   Method: Composition-based stats.
 Identities = 26/152 (17%), Positives = 50/152 (32%), Gaps = 20/152 (13%)

Query: 480 EYILKDAIGRDWQCGTIQVDF------NLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           E   K   GR     +I+V              N  +V+  ++    V +     G   R
Sbjct: 296 EICGKCEEGRLEPLKSIEVGHIFLLGNKYSKPLNVKFVDKENKNETFVHMGCYGIGVS-R 354

Query: 534 FIGIMIE----NFKGNLPLWLSPIQAIVT--TITSSAVEYAQEIANLLKSHHLS-----I 582
            +G + E    +     P  ++P +  +          +  Q++ + L +          
Sbjct: 355 LVGAIAELGRDSNGFRWPAIMAPYKVSICTGPNNPENSQRLQDVKSKLLNDPTMQNLQND 414

Query: 583 ETDFRNETIN--YKIREHSIKKIPIIIICGDK 612
             D  NE +    +I+      IP+ +I G K
Sbjct: 415 ILDQFNEKLGIGARIKLSHAMGIPLCVIVGSK 446


>gi|160946398|ref|ZP_02093607.1| hypothetical protein PEPMIC_00358 [Parvimonas micra ATCC 33270]
 gi|158447514|gb|EDP24509.1| hypothetical protein PEPMIC_00358 [Parvimonas micra ATCC 33270]
          Length = 463

 Score = 77.5 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 51/342 (14%), Positives = 102/342 (29%), Gaps = 46/342 (13%)

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEP 373
           R N+        T        L+P    G    F +  + S +++P  +A+ G  +RNE 
Sbjct: 151 RFNLMFKTFQGVTEDSKSEIYLRPETAQGIFVNFKNIARTSRKKVPFGIAQVGKSFRNEI 210

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
           +   +   R R F Q +   FC   +         N   +     G  +  ++L    ++
Sbjct: 211 TPG-NFTFRTREFEQMELEFFCKPGEDLEWYEYWKNYSFNWLLSLGMNEETLRLRDHEKE 269

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
            +   + +  A   +                 G+            E   +D        
Sbjct: 270 EL---SFYSKATCDI-----EFLFPFGWGELWGIADRTDYDLSRHIEVSGEDL------- 314

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLP-- 547
                          +     +EK  P  I     G+    +  +     E   G     
Sbjct: 315 --------------RYIDPVTNEKYIPYCIE-PSLGADRVALAFLCNAYDEEEIGEGDVR 359

Query: 548 ------LWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
                   L+P +A +  +T    E + EI + L  +   I+TD    +I  + R     
Sbjct: 360 TVLRLHPALAPFKAAILPLTKKLSEKSDEIYDELSKY-FMIDTDVSG-SIGKRYRRQDEI 417

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             P  I        +  + +R   +   +++ + +    + K
Sbjct: 418 GTPFCITVDFDTLEDECVTVRFRDTMEQERIKISELKDFIEK 459


>gi|219850181|ref|YP_002464614.1| YbaK/prolyl-tRNA synthetase associated region [Chloroflexus
           aggregans DSM 9485]
 gi|219544440|gb|ACL26178.1| YbaK/prolyl-tRNA synthetase associated region [Chloroflexus
           aggregans DSM 9485]
          Length = 531

 Score = 77.5 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 17/105 (16%), Positives = 38/105 (36%), Gaps = 2/105 (1%)

Query: 540 ENFKGNLPLWLSPI--QAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           +      P  ++P+    +      + V  A  +A  L++   S+  D R+E    K  +
Sbjct: 417 DERGIVWPAAIAPVDIHLVTIGRGEAVVTAAHTLATELRNAGWSVLIDDRDERAGVKFND 476

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             +   P  ++  +K  +   + +RR        ++    I  L 
Sbjct: 477 ADLIGAPWRLVVSEKLLAAGQVEVRRRTEVQATVIAQAKVIAWLQ 521


>gi|289177374|gb|ADC84620.1| Glycyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           BB-12]
          Length = 638

 Score = 77.1 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 54/348 (15%), Positives = 110/348 (31%), Gaps = 50/348 (14%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPS 374
            NM           +     L+P    G    F +    S  + P  +A  G  +RNE +
Sbjct: 287 FNMMLRTHLGPVEDENSLHYLRPETAQGIFVDFKNVMTSSRSKPPFGIANTGKSFRNEIT 346

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              + + R R F Q +   F       +      N     Y D G     ++    P+  
Sbjct: 347 PG-NFIFRTREFEQMEMEFFVEPGTDEDWHQYWINARTQWYIDLGVNPENLRHYEHPK-- 403

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG-EGAFYGPKFEYILKDAIGRDWQC 493
                             + + + S+  ++     G +G+ +G      L+    R    
Sbjct: 404 ------------------EKLAHYSKRTVDIEYRFGFQGSDWG-----ELEGVANRTDFD 440

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK---------- 543
                  +      +++  +  EK  P +I     G     +  +++ +           
Sbjct: 441 LGAHAKHSGED--LSYFNQATGEKYIPYVIE-PAAGLSRSLMAFLVDAYDVDEAPNTKGG 497

Query: 544 ------GNLPLWLSPIQAIVTTITSSAV--EYAQEIANLLKSHHLSIETDFRNETINYKI 595
                   L   L+P++A V  ++        AQ++A  L+ +   I+ D     I  + 
Sbjct: 498 VDKRTVLRLDPRLAPVKAAVLPLSKKPELQSVAQDLAQDLRLNDWMIDYDESGA-IGRRY 556

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           R       P+ I        ++++ IR   +   ++V+L      + K
Sbjct: 557 RRQDEIGTPLCITVDFDTLDDQAVTIRERDTMQQERVALTQVADYVAK 604


>gi|296394225|ref|YP_003659109.1| glycyl-tRNA synthetase [Segniliparus rotundus DSM 44985]
 gi|296181372|gb|ADG98278.1| glycyl-tRNA synthetase [Segniliparus rotundus DSM 44985]
          Length = 465

 Score = 77.1 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 65/348 (18%), Positives = 121/348 (34%), Gaps = 23/348 (6%)

Query: 307 QSGHWDS-YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAE 364
           + G W      NM           +     L+P    G    F + + +  R+ P  +A+
Sbjct: 133 EPGQWTEPRDFNMMLKTYLGPIESEDGLHYLRPETAQGIFVNFANVVTTARRKPPFGIAQ 192

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
            G  +RNE +   + + R R F Q +   F   +          +  +  Y D G +   
Sbjct: 193 IGKSFRNEITPG-NFIFRTREFEQMEMEFFVEPQTAREWHQHWIDTRLQWYVDLGIDPEN 251

Query: 425 VKLSTRPEKRV--GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           ++L   P++++   SD   D          +  +           L       G    Y 
Sbjct: 252 LRLYEHPKEKLSHYSDRTVDIEYRFRFQGSEWGELEGVANRTDFDLSTHAKHSGADLSYY 311

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
            + A  R +    I+    L     AF V++++E   P        G  +R +       
Sbjct: 312 DQ-AQDRRYVPYVIEPAAGLTRSLMAFLVDAYAEDEAPNTKG----GVDKRTV------- 359

Query: 543 KGNLPLWLSPIQAIVTTITSS--AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              L   L+P++A V  +      V  A+++A  L+    +I+ D     I  + R    
Sbjct: 360 -LRLDPRLAPVKAAVLPLQKDGGLVAAAKDLAARLRKR-WNIDYDETQA-IGRRYRRQDE 416

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
              P  +    +   ++++ IR   + + Q+V+L      L  E L P
Sbjct: 417 IGTPFCVTVDFESLEDQAVTIRERDTMSQQRVALDQVAAFLF-ERLDP 463


>gi|311744086|ref|ZP_07717892.1| glycyl-tRNA synthetase beta subunit [Aeromicrobium marinum DSM
           15272]
 gi|311313216|gb|EFQ83127.1| glycyl-tRNA synthetase beta subunit [Aeromicrobium marinum DSM
           15272]
          Length = 462

 Score = 77.1 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 54/383 (14%), Positives = 112/383 (29%), Gaps = 51/383 (13%)

Query: 280 ISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRA-NMFAVKCADDTIKDLRTFALKP 338
            +Y  +K  DD + +    ++  +     G W   +  N                  L+P
Sbjct: 105 EAYAEKKGLDDPDAVGMDLLVCANC-GTKGQWTEPKMFNGLLKTHLGPVESAEGLHYLRP 163

Query: 339 MNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK 397
               G    F      S R+ P  + + G  +RNE +   + + R R F Q +   F   
Sbjct: 164 ETAQGIFVNFAQVMTSSRRKPPFGIGQIGKSFRNEITPG-NFIFRTREFEQMEMEYFVAP 222

Query: 398 EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKN 457
                         +  Y D G     ++    P          +   +  K  +D    
Sbjct: 223 GADEEAHEYWLGERMRWYTDLGIAADNLRFFEHPA---------EKLSHYAKRTVDIEYR 273

Query: 458 SSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK 517
                   G L G            + +    D    +     +L      ++     ++
Sbjct: 274 FGFQGSEWGELEG------------VANRTDFDLSTHSSHSGKDLR-----YFDQESGDR 316

Query: 518 CHPVMIHRAVFGSIERFIGIMIENFKGN----------------LPLWLSPIQAIVTTIT 561
             P +I     G     +  +++ +  +                L   L+P +  V  ++
Sbjct: 317 WFPYVIE-PAAGVNRSMMAFLVDAYAEDEAPNSKGGVDTRTVLRLDPRLAPCKVAVLPLS 375

Query: 562 --SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSI 619
                   A+ +A  L+ +  +++ D     I  + R       P  +        ++++
Sbjct: 376 RNEQLSPAARSLATELRGY-WNVDFDDSAA-IGKRYRRQDEIGTPFCVTVDFDTLDDQAV 433

Query: 620 GIRRFGSTTTQKVSLLDAIPILT 642
            IR   S   ++V+L      L 
Sbjct: 434 TIRERDSMQQERVALTQVREWLA 456


>gi|325475340|gb|EGC78525.1| glycyl-tRNA synthetase [Treponema denticola F0402]
          Length = 451

 Score = 77.1 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 60/440 (13%), Positives = 136/440 (30%), Gaps = 76/440 (17%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEIN---TPQVLDQHLWQQSGHWDSY 314
           I    +G   +   G ++   +     +++   ++ I       ++    W+ SGH +++
Sbjct: 27  IYGGQNGAWDYGPLGIELKNNVSRAWWKEMTQLHDNIVGLDAAILMHPRTWEASGHVENF 86

Query: 315 ----------------------------------------RANMFAVKCADDTIKDLRTF 334
                                                   + N+        T  +    
Sbjct: 87  TDPLVDCKKCKSRFRADHLPPENLEKRVCPDCGGELTDTRKFNLMFKTHIGPTDDNSSVI 146

Query: 335 ALKPMNCPGHVAVFNHGLKSYR-ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
            L+P    G    + + ++S R ++P  +A+ G  +RNE   + + + R   F Q +   
Sbjct: 147 YLRPETAQGIYVNYKNIIQSNRMKIPFGIAQIGKAFRNEIV-TKNFIFRTCEFEQMEMQF 205

Query: 394 FCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
           F     +  + +  K      + Y+ +G     ++         G D L   A++     
Sbjct: 206 FVKPGTDDEWFDYWK--KQRWAFYEKYGVRTNKLQWHQH-----GKDELAHYAKDAYDIE 258

Query: 452 LDT-IKNSSQDRIN--TGVLLGEGAFYGPKFEYILKDAI-GRDWQCGTIQVDFNLPSRFN 507
            +  +     + ++  T   L     Y  K +    D   G +     I       +R  
Sbjct: 259 YEFPMGFKELEGVHNRTNYDLTRHTEYSGK-DMQYIDQDNGNEKYIPYIIETSAGLTRNV 317

Query: 508 AFYV-NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTI--TSSA 564
             ++ +++ E+      +   + ++  F               ++PI   V  +      
Sbjct: 318 LMFICDAYDEEKVADKGNDDDWRTVLHFH------------PNIAPITVAVLPLMKKDGL 365

Query: 565 VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRF 624
            E A+EI N LK      + D     I  + R       P  +        + ++ +R  
Sbjct: 366 AELAEEIRNELKEE-FKTDYDQSGA-IGKRYRRQDEVGTPFCVTVDYDSKEDNTVTLRFR 423

Query: 625 GSTTTQKVSLLDAIPILTKE 644
            S    ++   + I  +  E
Sbjct: 424 DSMEQVRIPRTELISRIKTE 443


>gi|322374872|ref|ZP_08049386.1| serine--tRNA ligase [Streptococcus sp. C300]
 gi|321280372|gb|EFX57411.1| serine--tRNA ligase [Streptococcus sp. C300]
          Length = 424

 Score = 77.1 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 59/363 (16%), Positives = 125/363 (34%), Gaps = 41/363 (11%)

Query: 106 YDFDKEQPFSSDELAQIEKKMQEIIARDSPF---------LKQYLSHEKARELFESKKEA 156
           +D   E+  +    A I  +M+EI A+              +  +S E A+     +   
Sbjct: 11  FDAVAEKLATRGVDAAILNEMKEIDAKRRDILVKVETLKAERNTVSAEIAQAKRNKENAD 70

Query: 157 YKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPM 216
            K+  ++++ A+  V     GE            T  +          GA    D +  +
Sbjct: 71  DKIAAMQTLSAEVKVLDAELGE----IDAKLTEFTTTLPNIPADSVPVGA----DEDDNV 122

Query: 217 LSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIF 276
             R +GT      E   +    E+    D  +  +      +        F+   G ++ 
Sbjct: 123 EVRRWGTPREFDFEPKAHWDLGEDLGILDWERGGKVTGARFL--------FYKGLGARLE 174

Query: 277 QTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFA 335
           + + ++M     K+ Y E+ TP +++      +G +  ++ + F +   +        F 
Sbjct: 175 RAIYNFMLDEHGKEGYTEVITPYIVNHDSMFGTGQYPKFKEDTFELSDTN--------FV 226

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAH 392
           L P         +   +   ++LP+        +R+E   +     GL+R+  F + +  
Sbjct: 227 LIPTAEVPLTNYYRDEILDGKDLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMV 286

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIM 448
            F   E+ + E  K+     +I +       +V LST              +W  A+N  
Sbjct: 287 KFAKPEESYEELEKMTANAENILQKLNLPYRVVALSTGDMGFSAAKTYDLEVWIPAQNTY 346

Query: 449 KGV 451
           + +
Sbjct: 347 REI 349


>gi|255293004|dbj|BAH90101.1| glycyl-tRNA synthetase [uncultured bacterium]
          Length = 492

 Score = 77.1 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 52/383 (13%), Positives = 121/383 (31%), Gaps = 47/383 (12%)

Query: 280 ISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPM 339
             Y  +K  D+ + ++T  +   +   +    +  + N            +     L+P 
Sbjct: 133 EEYAEKKGIDNPDTVDTALIACPNCGAKEQWSEPRQFNGLLKTFLGPVEDESGLHYLRPE 192

Query: 340 NCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE 398
              G    F +    +  + P  + + G  +RNE +   + + R R F Q +   F    
Sbjct: 193 TAQGIFVNFANVMTTARMKPPFGIGQVGKSFRNEITPG-NFIFRTREFEQMELEFFVKPG 251

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNS 458
                     +  +  Y D G ++  ++L   P+         +   +  K  +D     
Sbjct: 252 SDEEWHQHWIDARVDWYVDLGIDRDNLRLYEHPQ---------EKLSHYSKRTVDIEYRF 302

Query: 459 SQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC 518
                  G L G       + ++ L        +   +Q                 +E+ 
Sbjct: 303 RFQGSEWGELEGIAN----RTDFDLSTHGEHSGKEKQMQYFDQQA-----------NERW 347

Query: 519 HPVMIHRAVFGSIERFIGIMIENFKGNLPLW----------------LSPIQAIVTTIT- 561
            P +I     G     +  M++ +                       L+P++  V  ++ 
Sbjct: 348 TPYVIE-PSAGLTRSLMAFMVDTYAEEEAPNAKGGTDIRTVLKLDKRLAPVKVAVLPLSR 406

Query: 562 -SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
                  A+++A  L+ +  +++ D   + I  + R       P  I    +   ++++ 
Sbjct: 407 NEQLSPKAKDLAAALRKN-WNVDFDD-AQAIGRRYRRQDEIGTPYCITVDFETLEDQAVT 464

Query: 621 IRRFGSTTTQKVSLLDAIPILTK 643
           IR   +   ++V+L      L +
Sbjct: 465 IRDRDTMAQERVALDQVEGYLAQ 487


>gi|29349019|ref|NP_812522.1| glycyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
 gi|253571164|ref|ZP_04848571.1| glycyl-tRNA synthetase [Bacteroides sp. 1_1_6]
 gi|298386727|ref|ZP_06996282.1| glycine--tRNA ligase [Bacteroides sp. 1_1_14]
 gi|29340926|gb|AAO78716.1| glycyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
 gi|251839117|gb|EES67201.1| glycyl-tRNA synthetase [Bacteroides sp. 1_1_6]
 gi|298260401|gb|EFI03270.1| glycine--tRNA ligase [Bacteroides sp. 1_1_14]
          Length = 513

 Score = 77.1 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 56/345 (16%), Positives = 112/345 (32%), Gaps = 54/345 (15%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    + +  K+   ++P  +A+ G  +RNE  
Sbjct: 194 FNLMFSTEMGSTSDGAMKIYLRPETAQGIFVNYLNVQKTGRMKVPFGIAQIGKAFRNEIV 253

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
            +   + R+R F Q +   F     E  + +  K   L       FG          +  
Sbjct: 254 -ARQFIFRMREFEQMEMQFFVKPGTELDWFKKWKEIRLKWHKALGFGDASYRYHDHDKLA 312

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
                    + A +I            +  +  G    EG      F+            
Sbjct: 313 HYA------NAATDI------------EFLMPFGFKEVEGIHSRTNFD------------ 342

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM--------IENFK- 543
              +        +   ++    +E   P +I  ++ G    F+ IM        +EN + 
Sbjct: 343 ---LSQHEKFSGKSIKYFDPELNESYTPYVIETSI-GVDRMFLSIMSAAYCEEQLENGES 398

Query: 544 ---GNLPLWLSPIQAIVTTITSSAV--EYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
                LP  L+P++  V  +       E A+EI + LK  H   + D ++ +I  + R  
Sbjct: 399 RVVLKLPAALAPVKLAVMPLIKKDGLPEKAREIIDALK-FHFHCQYDEKD-SIGKRYRRQ 456

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
                P  +    +   +  + +R   +   ++V++ +   I+  
Sbjct: 457 DAIGTPFCVTVDHQTLEDNCVTLRNRDTMQQERVAISELNNIIAD 501


>gi|307701747|ref|ZP_07638761.1| glycine--tRNA ligase [Mobiluncus mulieris FB024-16]
 gi|307613005|gb|EFN92260.1| glycine--tRNA ligase [Mobiluncus mulieris FB024-16]
          Length = 461

 Score = 77.1 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 61/385 (15%), Positives = 125/385 (32%), Gaps = 53/385 (13%)

Query: 280 ISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF-ALKP 338
             Y  +   D+ + ++   V         G W   RA    +K     + D      L+P
Sbjct: 104 EKYAEKHGIDNPDTVDMAVVA-CENCGVKGQWTEPRAFSGLLKTYLGPVDDESGLHFLRP 162

Query: 339 MNCPGHVAVFNHGLKSYRELP-VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK 397
               G    F + + S R  P   + + G  +RNE +   + + R R F Q +   F   
Sbjct: 163 ETAQGIFINFANVMNSARMRPPFGIGQIGKSFRNEITPG-NFIFRTREFEQMELEFFVEP 221

Query: 398 EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKN 457
                      +   + Y D G     ++    P+                    + + +
Sbjct: 222 GTDEEWHQYWIDHRFAWYTDLGISADNLRFYEHPK--------------------EKLSH 261

Query: 458 SSQDRINTGVLLG-EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE 516
            S+  ++     G EG+ +G      L+    R     ++  +     + + +      E
Sbjct: 262 YSKRTVDIEYAFGFEGSKWG-----ELEGIANRTDYDLSVHAEA-SGQKLDYYDQAKD-E 314

Query: 517 KCHPVMIHRAVFGSIERFIGIMIE--------NFKG--------NLPLWLSPIQAIVTTI 560
           +  P +I     G     +  +IE        N KG         L   L+P++  V  +
Sbjct: 315 RWVPYVIE-PSAGLTRSLMAFLIEAYTEDEAPNTKGGVDKRTVLRLDPRLAPVKVAVFPL 373

Query: 561 TSSAV--EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERS 618
           +      + A+ IA  L+    +++ D     +  + R       P  +       S+ +
Sbjct: 374 SKKETLPDLARGIAADLRKF-WNVDYDDAGA-VGRRYRRQDEIGTPYCVTVDFDSVSDHA 431

Query: 619 IGIRRFGSTTTQKVSLLDAIPILTK 643
           + +R   S T +++ +   +  L  
Sbjct: 432 VTVRERDSMTQERIPMEGLVAYLRD 456


>gi|86160141|ref|YP_466926.1| cyclic nucleotide-binding domain-containing protein
           [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85776652|gb|ABC83489.1| cyclic nucleotide-binding domain (cNMP-BD) protein
           [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 714

 Score = 77.1 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 42/181 (23%), Positives = 79/181 (43%), Gaps = 3/181 (1%)

Query: 22  TGSDVAESISRSLAKK-AVAVAINGKVCDLSDPV-REGSIEIITPEDPRSLAVIRHSCAH 79
           TG+ V + +  +L     VA  +  K   L+ PV  + ++  +T        V  HS   
Sbjct: 176 TGTRVRDLLPEALDGDLVVAGLLGQKPVSLATPVFTDTTVAPLTVSHWEGRQVYAHSLGL 235

Query: 80  IMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQ 139
           ++ EA   + P  +V +GP +        +      +   A++   M+ I+A D+PF  +
Sbjct: 236 VLLEAAHQVAPAARVRMGPSLGTRQLVVVEGADEDRAGLAARLAAGMERIVAADAPFRSE 295

Query: 140 YLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFK 199
           Y S ++A+  F  +  +    +L  +  +  V L   GE + L  GP + STG ++ +  
Sbjct: 296 YWSTDEAQGWFLERGWSDAARLL-RVRRQATVRLVSCGEVYALSMGPLLPSTGALRGWRL 354

Query: 200 L 200
            
Sbjct: 355 E 355


>gi|323337977|gb|EGA79216.1| YER087W-like protein [Saccharomyces cerevisiae Vin13]
 gi|323355284|gb|EGA87109.1| YER087W-like protein [Saccharomyces cerevisiae VL3]
          Length = 509

 Score = 77.1 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 62/153 (40%), Gaps = 10/153 (6%)

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
              E++   +  + LWQ +  W++  + +F +K +       + + L          +  
Sbjct: 6   GAIEVSLSAISSKALWQATDRWNN--SELFKLKDSK-----GKQYCLTATCEEDITDLMK 58

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
           + + SY+++P+ + +    YR+E      G++R R F   DA+ F + E+      +   
Sbjct: 59  NYIASYKDMPITIYQMTRKYRDEIRPR-GGILRGREFLMKDAYSFASNEEDAFASFQ--K 115

Query: 410 LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWD 442
           L  +  K F   KI    +      +G +   +
Sbjct: 116 LDDTYNKIFKDLKIPFVSAWADSGDIGGEFSKE 148



 Score = 41.3 bits (95), Expect = 0.54,   Method: Composition-based stats.
 Identities = 26/152 (17%), Positives = 50/152 (32%), Gaps = 20/152 (13%)

Query: 480 EYILKDAIGRDWQCGTIQVDF------NLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           E   K   GR     +I+V              N  +V+  ++    V +     G   R
Sbjct: 296 EICGKCEEGRLEPLKSIEVGHIFLLGNKYSKPLNVKFVDKENKNETFVHMGCYGIGVS-R 354

Query: 534 FIGIMIE----NFKGNLPLWLSPIQAIVT--TITSSAVEYAQEIANLLKSHHLS-----I 582
            +G + E    +     P  ++P +  +          +  Q++ + L +          
Sbjct: 355 LVGAIAELGRDSNGFRWPAIMAPYKVSICTGPNNPENSQRLQDVKSKLLNDPTMQNLQND 414

Query: 583 ETDFRNETIN--YKIREHSIKKIPIIIICGDK 612
             D  NE +    +I+      IP+ +I G K
Sbjct: 415 ILDQFNEKLGIGARIKLSHAMGIPLCVIVGSK 446


>gi|227833623|ref|YP_002835330.1| glycyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
 gi|262184626|ref|ZP_06044047.1| glycyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
 gi|227454639|gb|ACP33392.1| glycyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
          Length = 459

 Score = 77.1 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 67/380 (17%), Positives = 129/380 (33%), Gaps = 41/380 (10%)

Query: 277 QTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF-A 335
             + +Y  +     +E  N    ++     Q G W   +A    +K     + D +    
Sbjct: 101 HLIEAYEEKH---GHEPANGLADINDPETGQPGDWTEPKAFSGLLKTFLGPVDDEQGLHY 157

Query: 336 LKPMNCPGHVAVFNHGLKSYR-ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           L+P    G    F + + S R + P  +A  G  +RNE +   + + R R F Q +   F
Sbjct: 158 LRPETAQGIFVNFKNVMTSARMKPPFGIANIGKSFRNEITPG-NFIFRTREFEQMEMEFF 216

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDT 454
               +         +   + Y D G +K  ++L   P+         +   +  K  +D 
Sbjct: 217 VKPGEDEEWHQYWIDDRFNWYIDLGIKKENLRLYEHPQ---------EKLSHYSKRTVDV 267

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKFEYILKDA----------IGRDWQCGTIQVDFNLPS 504
               +      G L G             K +           G  W    I+    L  
Sbjct: 268 EYAYNFKGSKWGELEGVANRTDYDLSVHTKGSGEDLSYFDQEAGERWTPYVIEPAAGLGR 327

Query: 505 RFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT--S 562
              AF ++++ E+  P        G+ +R +          L   L+P++  V  ++   
Sbjct: 328 AMMAFLIDAYDEEEAPNAKG----GTDKRVV--------LRLDRRLAPVKVAVLPLSKKE 375

Query: 563 SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
                A+E+AN L+++  ++E D     I  + R       P  +        + ++ +R
Sbjct: 376 ELSTPARELANKLRAN-WNVEFDVSGA-IGRRYRRQDEIGTPFCVTYDFDTLEDNAVTVR 433

Query: 623 RFGSTTTQKVSLLDAIPILT 642
              S   ++V L +    L 
Sbjct: 434 ERDSMEQERVKLDELEAYLA 453


>gi|163841662|ref|YP_001626066.1| glycyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
 gi|162955138|gb|ABY24653.1| glycyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
          Length = 479

 Score = 77.1 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 61/329 (18%), Positives = 110/329 (33%), Gaps = 49/329 (14%)

Query: 334 FALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
             L+P    G    FN+ L  S ++ P  + + G V+RNE +   + + R R F Q +  
Sbjct: 176 HYLRPETAQGIFTNFNNVLTTSRKKPPFGIGQIGKVFRNEITPG-NFIFRTREFEQMEIE 234

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
            F              +     + D G     ++    PE     D     A     G +
Sbjct: 235 FFTAPADADEWFKHWVDACWEWFVDLGINPDNMRKFDVPE----DDRAHYSA-----GTI 285

Query: 453 DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
           D            G L+G       + ++ L +         +             ++  
Sbjct: 286 DVEYKFGFQGSEWGELMGIAN----RTDFDLNNHSKASGTELS-------------YFNQ 328

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIE--------NFKG--------NLPLWLSPIQAI 556
           +  E+  P +I    FG     +  +I+        N KG         L   L+PI+A 
Sbjct: 329 ASGERYTPYVIE-PSFGLTRSMMAFLIDAYTEDQAPNTKGGVDTRTVLKLDPRLAPIKAA 387

Query: 557 VTTIT--SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
           V  ++        A+++A  L+    +IE D     I  + R       P  I       
Sbjct: 388 VLPLSRNEDLSPKAKDLAAELRKS-WNIEFDDAGA-IGRRYRRQDEVGTPFCITVDFDTL 445

Query: 615 SERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            ++++ IR   S + ++V+L      L +
Sbjct: 446 EDQAVTIRERDSMSQERVALDKVRGYLAE 474


>gi|323305259|gb|EGA59006.1| YER087W-like protein [Saccharomyces cerevisiae FostersB]
          Length = 509

 Score = 77.1 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 62/153 (40%), Gaps = 10/153 (6%)

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
              E++   +  + LWQ +  W++  + +F +K +       + + L          +  
Sbjct: 6   GAIEVSLSAISSKALWQATDRWNN--SELFKLKDSK-----GKQYCLTATCEEDITDLMK 58

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
           + + SY+++P+ + +    YR+E      G++R R F   DA+ F + E+      +   
Sbjct: 59  NYIASYKDMPITIYQMTRKYRDEIRPR-GGILRGREFLMKDAYSFASNEEDAFASFQ--K 115

Query: 410 LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWD 442
           L  +  K F   KI    +      +G +   +
Sbjct: 116 LDDTYNKIFKDLKIPFVSAWADSGDIGGEFSKE 148



 Score = 41.3 bits (95), Expect = 0.55,   Method: Composition-based stats.
 Identities = 26/152 (17%), Positives = 50/152 (32%), Gaps = 20/152 (13%)

Query: 480 EYILKDAIGRDWQCGTIQVDF------NLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           E   K   GR     +I+V              N  +V+  ++    V +     G   R
Sbjct: 296 EICGKCEEGRLEPLKSIEVGHIFLLGNKYSKPLNVKFVDKENKNETFVHMGCYGIGVS-R 354

Query: 534 FIGIMIE----NFKGNLPLWLSPIQAIVT--TITSSAVEYAQEIANLLKSHHLS-----I 582
            +G + E    +     P  ++P +  +          +  Q++ + L +          
Sbjct: 355 LVGAIAELGRDSNGFRWPAIMAPYKVSICTGPNNPENSQRLQDVKSKLLNDPTMQNLQND 414

Query: 583 ETDFRNETIN--YKIREHSIKKIPIIIICGDK 612
             D  NE +    +I+      IP+ +I G K
Sbjct: 415 ILDQFNEKLGIGARIKLSHAMGIPLCVIVGSK 446


>gi|304390915|ref|ZP_07372867.1| glycyl-tRNA synthetase beta subunit [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
 gi|315656296|ref|ZP_07909187.1| glycyl-tRNA synthetase beta subunit [Mobiluncus curtisii subsp.
           holmesii ATCC 35242]
 gi|304325798|gb|EFL93044.1| glycyl-tRNA synthetase beta subunit [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
 gi|315493298|gb|EFU82898.1| glycyl-tRNA synthetase beta subunit [Mobiluncus curtisii subsp.
           holmesii ATCC 35242]
          Length = 461

 Score = 77.1 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 63/375 (16%), Positives = 121/375 (32%), Gaps = 33/375 (8%)

Query: 280 ISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF-ALKP 338
             Y  +   ++ ++++   V         G W   RA    +K     + D      L+P
Sbjct: 104 EEYAEKHGVENPDDVSMDDV-PCPNCGVKGKWTEPRAFSGLLKTYLGPVDDESGLHFLRP 162

Query: 339 MNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK 397
               G    F +    + +  P  + + G  +RNE +   + + R R F Q +   F   
Sbjct: 163 ETAQGIFINFANVMTTARKRPPFGIGQIGKSFRNEITPG-NFIFRTREFEQMELEFFVEP 221

Query: 398 EQMFNECLKIHNLIISIYKDFGFEK-------IMVKLSTRPEKRVGSDALWDDAENIMKG 450
                      +     Y D G +           +  +   KR          EN   G
Sbjct: 222 GTDEEWHQYWIDHRFEWYTDLGIKPENLRLYEHPKEKLSHYSKRTVDIEYAFGFENSKWG 281

Query: 451 VLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFY 510
            L+ I N +   +   +        G K +Y  +    R      I+    L     AF 
Sbjct: 282 ELEGIANRTDYDLGVHMKAS-----GQKLDYYDQANDKRWVP-YVIEPSAGLTRSLMAFL 335

Query: 511 VNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT--SSAVEYA 568
           + +++E   P        G  +R +          L   LSP++  V  ++      E A
Sbjct: 336 IEAYTEDEAPNTKG----GVDKRTV--------LRLDPRLSPVKVAVLPLSRKDELPEIA 383

Query: 569 QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
             IA  L+ H  ++E D     +  + R       P  +        ++++ +R   + T
Sbjct: 384 HNIAAELRKH-WNVEYDDAGA-VGRRYRRQDEIGTPYCVTVDFDSLEDQAVTVRERDTMT 441

Query: 629 TQKVSLLDAIPILTK 643
            +++   + +  L  
Sbjct: 442 QERIGRDNLLAYLRD 456


>gi|153808899|ref|ZP_01961567.1| hypothetical protein BACCAC_03200 [Bacteroides caccae ATCC 43185]
 gi|149128232|gb|EDM19451.1| hypothetical protein BACCAC_03200 [Bacteroides caccae ATCC 43185]
          Length = 513

 Score = 77.1 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 56/345 (16%), Positives = 112/345 (32%), Gaps = 54/345 (15%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    + +  K+   ++P  +A+ G  +RNE  
Sbjct: 194 FNLMFSTEMGSTADGSMKIYLRPETAQGIFVNYLNVQKTGRMKVPFGIAQIGKAFRNEIV 253

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
            +   + R+R F Q +   F     E  + +  K   L       FG          +  
Sbjct: 254 -ARQFIFRMREFEQMEMQFFVKPGTELDWFKKWKEIRLKWHKALGFGDASYRYHDHDKLA 312

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
                    + A +I            +  +  G    EG      F+            
Sbjct: 313 HYA------NAATDI------------EFLMPFGFKEVEGIHSRTNFD------------ 342

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM--------IENFK- 543
              +        +   ++    +E   P +I  ++ G    F+ IM        +EN + 
Sbjct: 343 ---LSQHEKFSGKSIKYFDPELNESYTPYVIETSI-GVDRMFLSIMSAAYCEEQLENGES 398

Query: 544 ---GNLPLWLSPIQAIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
                LP  L+P++  V  +       E A+EI + LK  H   + D ++ +I  + R  
Sbjct: 399 RVVLKLPAALAPVKLAVMPLVKKDGLPEKAREIIDDLK-FHFHCQYDEKD-SIGKRYRRQ 456

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
                P  +    +   +  + +R   +   ++V++ +   I+  
Sbjct: 457 DAIGTPYCVTVDHQTLEDNCVTLRNRDTMQQERVAISELNNIIAD 501


>gi|269976456|ref|ZP_06183441.1| glycyl-tRNA synthetase [Mobiluncus mulieris 28-1]
 gi|306818266|ref|ZP_07451995.1| glycyl-tRNA synthetase beta subunit [Mobiluncus mulieris ATCC
           35239]
 gi|269935257|gb|EEZ91806.1| glycyl-tRNA synthetase [Mobiluncus mulieris 28-1]
 gi|304648911|gb|EFM46207.1| glycyl-tRNA synthetase beta subunit [Mobiluncus mulieris ATCC
           35239]
          Length = 461

 Score = 77.1 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 62/385 (16%), Positives = 125/385 (32%), Gaps = 53/385 (13%)

Query: 280 ISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF-ALKP 338
             Y  +   D+ + ++   V         G W   RA    +K     + D      L+P
Sbjct: 104 EKYAEKHGIDNPDTVDMAVVA-CENCGVKGQWTEPRAFSGLLKTYLGPVDDESGLHFLRP 162

Query: 339 MNCPGHVAVFNHGLKSYRELP-VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK 397
               G    F + + S R  P   + + G  +RNE +   + + R R F Q +   F   
Sbjct: 163 ETAQGIFINFANVMNSARMRPPFGIGQIGKSFRNEITPG-NFIFRTREFEQMELEFFVEP 221

Query: 398 EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKN 457
                      +   + Y D G     ++    P+                    + + +
Sbjct: 222 GTDEEWHQYWIDHRFAWYTDLGISADNLRFYEHPK--------------------EKLSH 261

Query: 458 SSQDRINTGVLLG-EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE 516
            S+  ++     G EG+ +G      L+    R     ++  +     + + +      E
Sbjct: 262 YSKRTVDIEYAFGFEGSKWG-----ELEGIANRTDYDLSVHAEA-SGQKLDYYDQAKD-E 314

Query: 517 KCHPVMIHRAVFGSIERFIGIMIE--------NFKG--------NLPLWLSPIQAIVTTI 560
           +  P +I     G     +  +IE        N KG         L   L+P++  V  +
Sbjct: 315 RWVPYVIE-PSAGLTRSLMAFLIEAYTEDEAPNTKGGVDKRTVLRLDPRLAPVKVAVFPL 373

Query: 561 TSSAV--EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERS 618
           +      E A+ IA  L+    +++ D     +  + R       P  +       S+ +
Sbjct: 374 SKKETLPELARGIAADLRKF-WNVDYDDAGA-VGRRYRRQDEIGTPYCVTVDFDSVSDHA 431

Query: 619 IGIRRFGSTTTQKVSLLDAIPILTK 643
           + +R   S T +++ +   +  L  
Sbjct: 432 VTVRERDSMTQERIPMEGLVAYLRD 456


>gi|255692612|ref|ZP_05416287.1| glycine--tRNA ligase [Bacteroides finegoldii DSM 17565]
 gi|260621671|gb|EEX44542.1| glycine--tRNA ligase [Bacteroides finegoldii DSM 17565]
          Length = 513

 Score = 77.1 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 56/345 (16%), Positives = 112/345 (32%), Gaps = 54/345 (15%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    + +  K+   ++P  +A+ G  +RNE  
Sbjct: 194 FNLMFSTEMGSTADGSMKIYLRPETAQGIFVNYLNVQKTGRMKVPFGIAQIGKAFRNEIV 253

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
            +   + R+R F Q +   F     E  + +  K   L       FG          +  
Sbjct: 254 -ARQFIFRMREFEQMEMQFFVKPGTELDWFKKWKEIRLKWHKALGFGDASYRYHDHDKLA 312

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
                    + A +I            +  +  G    EG      F+            
Sbjct: 313 HYA------NAATDI------------EFLMPFGFKEVEGIHSRTNFD------------ 342

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM--------IENFK- 543
              +        +   ++    +E   P +I  ++ G    F+ IM        +EN + 
Sbjct: 343 ---LSQHEKFSGKSIKYFDPELNESYTPYVIETSI-GVDRMFLSIMSASYCEEQLENGES 398

Query: 544 ---GNLPLWLSPIQAIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
                LP  L+P++  V  +       E A+EI + LK  H   + D ++ +I  + R  
Sbjct: 399 RVVLKLPAALAPVKLAVMPLVKKDGLPEKAREIIDNLK-FHFHCQYDEKD-SIGKRYRRQ 456

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
                P  +    +   +  + +R   +   ++V++ +   I+  
Sbjct: 457 DAIGTPYCVTVDHQTLEDNCVTLRNRDTMQQERVAISELNNIIAD 501


>gi|212690852|ref|ZP_03298980.1| hypothetical protein BACDOR_00340 [Bacteroides dorei DSM 17855]
 gi|237712657|ref|ZP_04543138.1| glycyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA]
 gi|237723598|ref|ZP_04554079.1| glycyl-tRNA synthetase [Bacteroides sp. D4]
 gi|265752342|ref|ZP_06088135.1| glycyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
 gi|212666581|gb|EEB27153.1| hypothetical protein BACDOR_00340 [Bacteroides dorei DSM 17855]
 gi|229438051|gb|EEO48128.1| glycyl-tRNA synthetase [Bacteroides dorei 5_1_36/D4]
 gi|229453978|gb|EEO59699.1| glycyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA]
 gi|263237134|gb|EEZ22604.1| glycyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
          Length = 513

 Score = 77.1 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 57/345 (16%), Positives = 112/345 (32%), Gaps = 54/345 (15%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    + +  K+   ++P  +A+ G  +RNE  
Sbjct: 194 FNLMFSTEMGSTADGAMKIYLRPETAQGIFVNYLNVQKTGRMKIPFGIAQIGKAFRNEIV 253

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
            +   + R+R F Q +   F     E  +    K   L       FG +        +  
Sbjct: 254 -ARQFIFRMREFEQMEMQFFVKPGTELEWFPKWKEIRLKWHKALGFGDDHYRFHDHDKLA 312

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
                    + A +I            +  +  G    EG      F+            
Sbjct: 313 HYA------NAATDI------------EFLMPFGFKEVEGIHSRTNFD------------ 342

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM--------IENFKG 544
              +        +   ++    +E   P +I  ++ G    F+ IM        +E+ + 
Sbjct: 343 ---LSQHEKFSGKSIKYFDPELNESYTPYVIETSI-GVDRMFLSIMSAAYTEETLESGET 398

Query: 545 ----NLPLWLSPIQAIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
                LP  L+P++  V  +       E A+EI N LK  H   + D ++ +I  + R  
Sbjct: 399 RVVLKLPAALAPVKLAVMPLVKKDGLPEKAREIMNDLK-FHFHCQYDEKD-SIGKRYRRQ 456

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
                P  I    +   +  + +R   +   ++V++ +   I+  
Sbjct: 457 DAIGTPYCITVDHQTLEDNCVTLRNRDTMQQERVAISELNNIIAD 501


>gi|224536479|ref|ZP_03677018.1| hypothetical protein BACCELL_01353 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224521921|gb|EEF91026.1| hypothetical protein BACCELL_01353 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 513

 Score = 77.1 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 53/343 (15%), Positives = 113/343 (32%), Gaps = 50/343 (14%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    + +  K+   ++P  +A+ G  +RNE  
Sbjct: 194 FNLMFSTEMGSTSDGAMKIYLRPETAQGIFVNYLNVQKTGRMKIPFGIAQIGKAFRNEIV 253

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
            +   + R+R F Q +   F           K   + +  +K  GF     +     +  
Sbjct: 254 -ARQFIFRMREFEQMEMQFFVKPGTELEWFKKWKEIRLKWHKALGFGDDHYRYHDHDKLA 312

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
             ++A  D                 +  +  G    EG      F+              
Sbjct: 313 HYANAATDI----------------EFLMPFGFKEVEGIHSRTNFD-------------- 342

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM--------IENFK--- 543
            +        +   ++    +E   P ++  ++ G    F+ IM        +E+ +   
Sbjct: 343 -LSQHEKFSGKNIKYFDPETNESYTPFVVETSI-GVDRMFLSIMSASYCEEQLESGESRV 400

Query: 544 -GNLPLWLSPIQAIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              LP  L+P++  V  +       E A+EI + LK  H   + D ++ +I  + R    
Sbjct: 401 VLRLPAALAPVKLAVMPLVKKDGLPEKAREIIDSLK-FHFHCQYDEKD-SIGKRYRRQDA 458

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              P  +    +   +  + +R   +   ++V++ +   I+  
Sbjct: 459 IGTPYCVTVDHQTLEDNCVTLRNRDTMQQERVAIAELNNIIAD 501


>gi|310287029|ref|YP_003938287.1| glycyl-tRNA synthetase [Bifidobacterium bifidum S17]
 gi|311063902|ref|YP_003970627.1| blycyl-tRNA synthetase [Bifidobacterium bifidum PRL2010]
 gi|309250965|gb|ADO52713.1| glycyl-tRNA synthetase [Bifidobacterium bifidum S17]
 gi|310866221|gb|ADP35590.1| GlyS Glycyl-tRNA synthetase [Bifidobacterium bifidum PRL2010]
          Length = 506

 Score = 77.1 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 57/379 (15%), Positives = 111/379 (29%), Gaps = 48/379 (12%)

Query: 278 TLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALK 337
            L      K  D   E     ++      +    +    NM           +     L+
Sbjct: 102 KLEESYAEKHGDKLPENGLKDIVCPECGTRGEWTEPRDFNMMLRTHLGPVEDENSLHYLR 161

Query: 338 PMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT 396
           P    G    F +    S  + P  +A  G  +RNE +   + + R R F Q +   F  
Sbjct: 162 PETAQGIFVDFKNVMTSSRSKPPFGIANMGKSFRNEITPG-NFIFRTREFEQMEMEFFVV 220

Query: 397 KEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIK 456
                       +     Y D G     ++    P+         +   +  K  +D   
Sbjct: 221 PGTDEEWHQYWIDTRTRWYTDLGINPENLRHYEHPK---------EKLSHYSKRTVDIEY 271

Query: 457 NSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE 516
                  + G L G            + +    D    +     +L      ++  +  E
Sbjct: 272 KFGFQGSDWGELEG------------IANRTDYDLSAHSKHSGEDLS-----YFNQAAGE 314

Query: 517 KCHPVMIHRAVFGSIERFIGIMIENFK----------------GNLPLWLSPIQAIVTTI 560
           K  P +I     G     +  +++ +                   L   L+P++A V  +
Sbjct: 315 KFVPYVIE-PAAGLTRSLMAFLVDAYDVDEAPNTKGGVDKRTVLRLDPRLAPVKAAVLPL 373

Query: 561 TSSAV--EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERS 618
           +        A ++A  L+ H   I+ D     I  + R       P+ I        +++
Sbjct: 374 SKKPELQSIAHDLAADLRQHEWMIDYDEAGA-IGRRYRREDEIGTPLCITVDFDTIDDQA 432

Query: 619 IGIRRFGSTTTQKVSLLDA 637
           + IR   +   ++V+L   
Sbjct: 433 VTIRERDTMQQERVALDKV 451


>gi|218258680|ref|ZP_03475001.1| hypothetical protein PRABACTJOHN_00656 [Parabacteroides johnsonii
           DSM 18315]
 gi|218225305|gb|EEC97955.1| hypothetical protein PRABACTJOHN_00656 [Parabacteroides johnsonii
           DSM 18315]
          Length = 514

 Score = 77.1 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 57/335 (17%), Positives = 108/335 (32%), Gaps = 34/335 (10%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    F +  K+   ++P  +A+ G  +RNE  
Sbjct: 194 FNLMFSTEMGSTADGAMKVYLRPETAQGIFVNFLNVQKTGRMKIPFGIAQIGKAFRNEIV 253

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
            +   + R+R F Q +   F     E  + +  K   L        G EK       +  
Sbjct: 254 -ARQFIFRMREFEQMEMQFFVRPGEEMEWFKQWKATRLKWHQAMGLGNEKYRYHDHEKLA 312

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
                    + A +I            +  +  G    EG      F+     +    + 
Sbjct: 313 HYA------NAATDI------------EFEMPFGFKEVEGIHSRTNFDL----SQHEKFS 350

Query: 493 CGTIQV-DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI-ERFIGIMIENFKGNLPLWL 550
              +Q  D  L   +  + +   +      +    + GS  E  +          LP  L
Sbjct: 351 GKKVQYFDPELNQSYTPYVI--ETSIGVDRVFLSVMAGSYCEETLESGETRVVLKLPAAL 408

Query: 551 SPIQAIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIII 608
           +PI+  V  +       E A+EI  +L+      + D ++ +I  + R       P  I 
Sbjct: 409 APIKLAVLPLVKKDGLPEKAEEIMKMLR-FDFRCQYDEKD-SIGKRYRRQDAIGTPYCIT 466

Query: 609 CGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
                  +  + IR   +   ++VS+     I+++
Sbjct: 467 VDHDTLKDNCVTIRFRDTMEQERVSIDKLHDIISE 501


>gi|295667908|ref|XP_002794503.1| prolyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
 gi|226285919|gb|EEH41485.1| prolyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
          Length = 589

 Score = 77.1 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 31/164 (18%), Positives = 56/164 (34%), Gaps = 41/164 (25%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK 322
           SGV      G ++ + L   + + ++                                  
Sbjct: 55  SGVFHLLPLGLRVQEKLERLIDKHMR---------------------------------- 80

Query: 323 CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMR 382
                 +    F L P +     ++    + SYR+LP+RL +FG  YR+EP     GL+R
Sbjct: 81  ---TLDRKEARFLLAPTHEEEITSLVESSVSSYRDLPLRLYQFGRKYRDEPRPR-QGLLR 136

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK 426
            R F   D + F   +    + ++ +N +   Y     E  +  
Sbjct: 137 GREFMMKDLYTF---DYSAEKAIETYNAVKEAYIRLFNELKLPY 177



 Score = 67.1 bits (162), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 52/126 (41%), Gaps = 10/126 (7%)

Query: 520 PVMIHRAVFGSIERFIGI----MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLL 575
           P+ +     G   R I      + +    N P  +SP   I+ +      E A+++ + L
Sbjct: 455 PLEMGCHGIGVS-RMIAAVADTLADPKGLNWPRVISPFDVIIISDRELEKE-AEQVYDTL 512

Query: 576 ---KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR-RFGSTTTQK 631
              +   +    D R +++ +K+R+  +   P+II+ G     +  + I+ R      + 
Sbjct: 513 MESQKADVDAIIDDREKSLTWKLRDADLIGYPVIIVIGKSWKRDNKLEIQCRRLENFRET 572

Query: 632 VSLLDA 637
           VSL D 
Sbjct: 573 VSLQDL 578


>gi|298345360|ref|YP_003718047.1| glycine--tRNA ligase [Mobiluncus curtisii ATCC 43063]
 gi|315655778|ref|ZP_07908676.1| glycyl-tRNA synthetase beta subunit [Mobiluncus curtisii ATCC
           51333]
 gi|298235421|gb|ADI66553.1| glycine--tRNA ligase [Mobiluncus curtisii ATCC 43063]
 gi|315489842|gb|EFU79469.1| glycyl-tRNA synthetase beta subunit [Mobiluncus curtisii ATCC
           51333]
          Length = 457

 Score = 77.1 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 63/375 (16%), Positives = 121/375 (32%), Gaps = 33/375 (8%)

Query: 280 ISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF-ALKP 338
             Y  +   ++ ++++   V         G W   RA    +K     + D      L+P
Sbjct: 100 EEYAEKHGVENPDDVSMDDV-PCPNCGVKGKWTEPRAFSGLLKTYLGPVDDESGLHFLRP 158

Query: 339 MNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK 397
               G    F +    + +  P  + + G  +RNE +   + + R R F Q +   F   
Sbjct: 159 ETAQGIFINFANVMTTARKRPPFGIGQIGKSFRNEITPG-NFIFRTREFEQMELEFFVEP 217

Query: 398 EQMFNECLKIHNLIISIYKDFGFEK-------IMVKLSTRPEKRVGSDALWDDAENIMKG 450
                      +     Y D G +           +  +   KR          EN   G
Sbjct: 218 GTDEEWHQYWIDHRFEWYTDLGIKPENLRLYEHPKEKLSHYSKRTVDIEYAFGFENSKWG 277

Query: 451 VLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFY 510
            L+ I N +   +   +        G K +Y  +    R      I+    L     AF 
Sbjct: 278 ELEGIANRTDYDLGVHMKAS-----GQKLDYYDQANDKRWVP-YVIEPSAGLTRSLMAFL 331

Query: 511 VNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT--SSAVEYA 568
           + +++E   P        G  +R +          L   LSP++  V  ++      E A
Sbjct: 332 IEAYTEDEAPNTKG----GVDKRTV--------LRLDPRLSPVKVAVLPLSRKDELPEIA 379

Query: 569 QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
             IA  L+ H  ++E D     +  + R       P  +        ++++ +R   + T
Sbjct: 380 HNIAAELRKH-WNVEYDDAGA-VGRRYRRQDEIGTPYCVTVDFDSLEDQAVTVRERDTMT 437

Query: 629 TQKVSLLDAIPILTK 643
            +++   + +  L  
Sbjct: 438 QERIGRDNLLAYLRD 452


>gi|227874941|ref|ZP_03993092.1| glycine--tRNA ligase [Mobiluncus mulieris ATCC 35243]
 gi|227844461|gb|EEJ54619.1| glycine--tRNA ligase [Mobiluncus mulieris ATCC 35243]
          Length = 485

 Score = 77.1 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 61/385 (15%), Positives = 125/385 (32%), Gaps = 53/385 (13%)

Query: 280 ISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF-ALKP 338
             Y  +   D+ + ++   V         G W   RA    +K     + D      L+P
Sbjct: 128 EKYAEKHGIDNPDTVDMAVVA-CENCGVKGQWTEPRAFSGLLKTYLGPVDDESGLHFLRP 186

Query: 339 MNCPGHVAVFNHGLKSYRELP-VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK 397
               G    F + + S R  P   + + G  +RNE +   + + R R F Q +   F   
Sbjct: 187 ETAQGIFINFANVMNSARMRPPFGIGQIGKSFRNEITPG-NFIFRTREFEQMELEFFVEP 245

Query: 398 EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKN 457
                      +   + Y D G     ++    P+                    + + +
Sbjct: 246 GTDEEWHQYWIDHRFAWYTDLGISADNLRFYEHPK--------------------EKLSH 285

Query: 458 SSQDRINTGVLLG-EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE 516
            S+  ++     G EG+ +G      L+    R     ++  +     + + +      E
Sbjct: 286 YSKRTVDIEYAFGFEGSKWG-----ELEGIANRTDYDLSVHAEA-SGQKLDYYDQAKD-E 338

Query: 517 KCHPVMIHRAVFGSIERFIGIMIE--------NFKG--------NLPLWLSPIQAIVTTI 560
           +  P +I     G     +  +IE        N KG         L   L+P++  V  +
Sbjct: 339 RWVPYVIE-PSAGLTRSLMAFLIEAYTEDEAPNTKGGVDKRTVLRLDPRLAPVKVAVFPL 397

Query: 561 TSSAV--EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERS 618
           +      + A+ IA  L+    +++ D     +  + R       P  +       S+ +
Sbjct: 398 SKKETLPDLARGIAADLRKF-WNVDYDDAGA-VGRRYRRQDEIGTPYCVTVDFDSVSDHA 455

Query: 619 IGIRRFGSTTTQKVSLLDAIPILTK 643
           + +R   S T +++ +   +  L  
Sbjct: 456 VTVRERDSMTQERIPMEGLVAYLRD 480


>gi|319947863|ref|ZP_08022050.1| glycyl-tRNA synthetase [Dietzia cinnamea P4]
 gi|319438469|gb|EFV93402.1| glycyl-tRNA synthetase [Dietzia cinnamea P4]
          Length = 464

 Score = 77.1 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 61/452 (13%), Positives = 135/452 (29%), Gaps = 109/452 (24%)

Query: 270 RKGWKIFQTLISYMRRKIKDDYEEIN---TPQVLDQHLWQQSGHWDSYRANMFAVKCADD 326
             G ++   +     R      E++    +  +L + +WQ SGH +++   +   +    
Sbjct: 39  PLGVELKDNIKKQWWRTFVTGREDVVGLDSSIILPRQVWQASGHVETFTDPLVECRNCHT 98

Query: 327 TIKDL---RTFALK---------PMNCP-------------------------------- 342
            ++       +A K         PM                                   
Sbjct: 99  RLRQDHLQEAYAAKKKLDSVADAPMTEIACPNCGTKGQWTDPQLFSGLMKTFLGPVDNET 158

Query: 343 -----------GHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
                      G    + +    + R+ P  + + G  +RNE +   + + R R F Q +
Sbjct: 159 GLHYLRPETAQGIFINYKNVMTTARRKPPFGIGQIGKAFRNEITPG-NFIFRTREFEQME 217

Query: 391 AHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKG 450
              F   ++      +        + D G +   ++    P+                  
Sbjct: 218 IEFFVKPDEADEWFKRWVEDCWDWFVDLGIDPENMRRFDVPD------------------ 259

Query: 451 VLDTIKNSSQDRINTGVLLGE-GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAF 509
             D   + S   I+     G  G  +G       +              D         +
Sbjct: 260 --DERAHYSAGTIDFEYKFGFSGNEWGELMGVANRTDYDLTQHQTHSGEDLQ-------Y 310

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW----------------LSPI 553
           +  +  EK  P +I    FG     +  +I+ +  +                    L+PI
Sbjct: 311 FDQASGEKYVPYVIE-PSFGLTRSLMAFLIDAYTEDEAPNAKGGVDTRTVLKLDRRLAPI 369

Query: 554 QAIVTTITSSAV--EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
           +A V  ++ +A     A+++A  L+ +  +++ D   + I  + R H     P  I    
Sbjct: 370 KAAVLPLSRNADLSPKARDLAAQLRKN-WNVDFDD-AQAIGRRYRRHDEIGTPFCITVDF 427

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
               ++++ IR   +   ++V++      L +
Sbjct: 428 DTLEDQAVTIRERDTMAQERVAIDQVEGYLAQ 459


>gi|294887331|ref|XP_002772056.1| glycyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
 gi|239875994|gb|EER03872.1| glycyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
          Length = 596

 Score = 77.1 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 63/406 (15%), Positives = 139/406 (34%), Gaps = 49/406 (12%)

Query: 276 FQTLISYMR-------RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTI 328
            + L  ++R        ++   ++E+   Q ++            Y  N+   K      
Sbjct: 179 REQLQKWIRVADSLSAEEVDKIFQELGIKQAMNLSFP--------YPFNLM-FKTTIGPQ 229

Query: 329 KDLRTFALKPMNCPGHVAVFNHGL-KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
            +L  F L+P    G    F   L ++  ++P   A+ G  +RNE +    GL+RVR F 
Sbjct: 230 GNLVGF-LRPETAQGMFVNFRRLLEQNGGKMPFAAAQIGLGFRNEIAPR-AGLLRVREFP 287

Query: 388 QDDAHVFCTKEQ----MFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDD 443
             +   F   +      F++   +   +   +      K+   L+ R    +G       
Sbjct: 288 MAEIEHFVHPDHKDHPDFHKVADLKLPLFPQHNQLTDGKLRTDLTLRQAVDIGMINNETL 347

Query: 444 AENIMKGVLDTIKNSSQDRINTGVLL---GEGAFYGPKFEYILKDAIGRDWQCGTIQVDF 500
           A  + +  L  +K      +             +    ++     + G     G  ++  
Sbjct: 348 AYFMGRTFLFLVKAGVDGSMLRFRQHLKSEMAHYACDCWDAEALLSYGWTEINGVYELKI 407

Query: 501 NLPSRFNAFY-------VNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------------ 541
              +R+N          V    ++   +         + R I  ++E+            
Sbjct: 408 CTGARYNITKEMVKVKTVTKRVQEVPFIPSVIEPAFGVGRIIYTILEHTFRSREMEDQEL 467

Query: 542 -FKGNLPLWLSPIQAIVTTITSSAVEY---AQEIANLLKSHHLSIETDFRNETINYKIRE 597
               +LP  ++P +  V  I+S+  ++     +I + LK H +S + D   + I  +   
Sbjct: 468 RCYLSLPPVVAPTKVSVLPISSNPTQFKPAMHKITDALKEHGISYKVDDSGQAIGKRYAR 527

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
                IP  I    +  ++ ++ +R   S +  ++ + D   ++ K
Sbjct: 528 TDEIGIPFGITIDFQSLNDDTVTLRERDSMSQIRLPIADVADLVYK 573


>gi|313619135|gb|EFR90924.1| prolyl-tRNA synthetase [Listeria innocua FSL S4-378]
          Length = 145

 Score = 77.1 bits (188), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 24/138 (17%), Positives = 54/138 (39%), Gaps = 7/138 (5%)

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW---LSPIQAIVTTI---TSS 563
            +   + +  P+++     G       I  ++   N  +W   +SP    +  +   +  
Sbjct: 2   TILDENGRAQPIIMGCYGIGLSRILSAIAEQSNDENGLVWDKQISPFDLHLIPVNMKSEE 61

Query: 564 AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRR 623
            V +A+ + + L+    S+  D R E    K  +  +  +PI I  G K A+E  + ++ 
Sbjct: 62  QVAFAESLYDSLQKAGFSVLIDDRTERAGVKFADADLIGLPIRITVGKK-AAEGIVEVKI 120

Query: 624 FGSTTTQKVSLLDAIPIL 641
             +    +V   + +  L
Sbjct: 121 RKTGEMIEVRQDELLNTL 138


>gi|240172984|ref|ZP_04751642.1| glycyl-tRNA synthetase [Mycobacterium kansasii ATCC 12478]
          Length = 460

 Score = 77.1 bits (188), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 54/360 (15%), Positives = 114/360 (31%), Gaps = 58/360 (16%)

Query: 307 QSGHWDS-YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAE 364
           + G W      NM           +     L+P    G    F + +  S ++ P  + +
Sbjct: 128 EPGQWTEPREFNMMLKTYLGPIETEEGLHYLRPETAQGIFINFANVVTTSRKKPPFGIGQ 187

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
            G  +RNE +   + + R R F Q +   F              +  +  Y + G +   
Sbjct: 188 IGKSFRNEITPG-NFIFRTREFEQMEMEFFVEPSTAKEWHQYWIDTRLQWYVELGIDPQN 246

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLD-TIKNSSQDRI---NTGVLLGEGAFYGPKFE 480
           ++             LW+  +  +    D T+    +        G L G       + +
Sbjct: 247 LR-------------LWEHPKEKLSHYSDRTVDIEYKFGFLGNPWGELEGVAN----RTD 289

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           + L               D N       FY   +  +  P +I     G    F+  +I+
Sbjct: 290 FDLSTHSKHSGT------DLN-------FYDQVNDTRYTPYVIE-PAAGLTRSFMAFLID 335

Query: 541 NFKGNLPLW----------------LSPIQAIVTTIT--SSAVEYAQEIANLLKSHHLSI 582
            +  +                    L+P++A V  ++  +     A+++A  L++   +I
Sbjct: 336 AYSEDEAPNAKGVMEKRTVLRLDARLAPVKAAVLPLSRHADLSPKARDLAAELRTC-WNI 394

Query: 583 ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           E D     I  + R       P  +        + ++ +R   + T +++++      L 
Sbjct: 395 EFDDAGA-IGRRYRRQDEIGTPYCVTVDFDSLEDNAVTVRERDAMTQERIAIDKVADYLA 453


>gi|70953193|ref|XP_745713.1| prolyl-t-RNA synthase [Plasmodium chabaudi chabaudi]
 gi|56526123|emb|CAH76923.1| prolyl-t-RNA synthase, putative [Plasmodium chabaudi chabaudi]
          Length = 498

 Score = 77.1 bits (188), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 52/376 (13%), Positives = 122/376 (32%), Gaps = 70/376 (18%)

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
           N       +   ++++  +    L R   +  I    +G+      G ++   +  ++  
Sbjct: 8   NKYIFNRIFNDNVKQNGDKASELLFRANYIKEI----NGLYNMLPLGLRVINKIKDFINN 63

Query: 286 KIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAV---------KCADDTIK---DLR 332
            ++  +   +    +  + LW  S     Y      V             +++K   +  
Sbjct: 64  YLEKINSHSVFLSILQPKRLWNISDRSKLYSEEFLYVYKQKQQKVDTDIGESVKKKFEDD 123

Query: 333 TFALKPMNCPGHVAVFNHGLK---SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
              L P      + + N       + +  P+ + ++   +RNE       L + + F   
Sbjct: 124 GNILSPTCEESALTLINEIYNLNATEKHFPLLIHQYNYKFRNEKRLE-KSLFKSKEFLMK 182

Query: 390 DAHVFCTKEQMFNECLKIHNLII-SIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIM 448
           D + F T E+  NE  +I+     +I+   G +  ++K   + +                
Sbjct: 183 DGYSFHTNEKCMNEIYEIYKECYNNIFNKLGLKYNIIKKRKKDKM--------------- 227

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
              L++            +L  +G F                    T ++      + + 
Sbjct: 228 -NALESH--------EYQILCRDGKF---------------KEGAHTFKLGDYYSKKLDI 263

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL----SPIQAIVTTITSS- 563
            ++N  +EK +  M    +   I R +  +I+NF  +  + L    +P    +       
Sbjct: 264 HFLNKRNEKKYIYMGSYGI--GINRLLYFLIDNFYDDDGIKLPSPIAPFSVYLIQTNQKS 321

Query: 564 --AVEYAQEIANLLKS 577
             + E  ++I N LK+
Sbjct: 322 KYSSEKVKKIVNKLKN 337


>gi|56807927|ref|ZP_00365750.1| COG0172: Seryl-tRNA synthetase [Streptococcus pyogenes M49 591]
 gi|209559859|ref|YP_002286331.1| seryl-tRNA synthetase [Streptococcus pyogenes NZ131]
 gi|238065107|sp|B5XHX4|SYS_STRPZ RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|209541060|gb|ACI61636.1| Seryl-tRNA synthetase [Streptococcus pyogenes NZ131]
          Length = 425

 Score = 77.1 bits (188), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 43/243 (17%), Positives = 93/243 (38%), Gaps = 21/243 (8%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIF 276
           G       E+ ++    +   E + H  L  ++D+          G+  +F+   G ++ 
Sbjct: 115 GADEEDNVEIRRWGTPRDFDFEVKAHWDLGEDLDILDWERGAKVTGARFLFYKNLGARLE 174

Query: 277 QTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFA 335
           + L ++M    IK+ Y+EI TP +++      +G +  ++ + F +   +        F 
Sbjct: 175 RALYNFMLDEHIKEGYQEIITPYMVNHDSMFGTGQYPKFKEDTFELADTN--------FV 226

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAH 392
           L P         +   +   +ELP+        +R+E   +     GL+R+  F + +  
Sbjct: 227 LIPTAEVPLTNYYRGEILDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMV 286

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIM 448
            F   E+ + E  K+     +I +  G    ++ L T              +W  A+N  
Sbjct: 287 KFAKPEESYQELEKMTANAENILQKLGLPYRVISLCTGDMGFSAAKTYDVEVWIPAQNTY 346

Query: 449 KGV 451
           + +
Sbjct: 347 REI 349


>gi|161350030|ref|YP_397784.2| seryl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312]
          Length = 425

 Score = 76.7 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 41/242 (16%), Positives = 83/242 (34%), Gaps = 20/242 (8%)

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFH----IAEDGSGVIFWHRKGWKIFQ 277
           G   +   ++  +   L     + H ++   +++F          S  I     G K+ +
Sbjct: 119 GKDESDNVQIKTWGDTLIRENIKSHWEIGESLNIFDSVKSTKISKSRFITLIGNGAKLER 178

Query: 278 TLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFAL 336
            LI++M     K+ Y E+  P +++    + SG    +    F     D          L
Sbjct: 179 ALINFMLDIHTKNGYLELMPPALVNSESLRGSGQLPKFSNESFKCSNDD--------LWL 230

Query: 337 KPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHV 393
            P       A   + +   ++LP++   +   +R E         GL+R+  F + + + 
Sbjct: 231 SPTAEVPLTAFHRNEIIDPKQLPIKYVAYSPCFRREAGSYGRDTKGLIRLHQFNKVELYW 290

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP----EKRVGSDALWDDAENIMK 449
           FC   +      KI +   SI K       +V + T        R     +W  +    +
Sbjct: 291 FCDPSKSLEAHKKITSDAESILKKLNLPYRLVDICTGDLGFSSSRTFDLEVWLPSSKCYR 350

Query: 450 GV 451
            +
Sbjct: 351 EI 352


>gi|78713171|gb|ABB50348.1| seryl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312]
          Length = 431

 Score = 76.7 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 41/242 (16%), Positives = 83/242 (34%), Gaps = 20/242 (8%)

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFH----IAEDGSGVIFWHRKGWKIFQ 277
           G   +   ++  +   L     + H ++   +++F          S  I     G K+ +
Sbjct: 125 GKDESDNVQIKTWGDTLIRENIKSHWEIGESLNIFDSVKSTKISKSRFITLIGNGAKLER 184

Query: 278 TLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFAL 336
            LI++M     K+ Y E+  P +++    + SG    +    F     D          L
Sbjct: 185 ALINFMLDIHTKNGYLELMPPALVNSESLRGSGQLPKFSNESFKCSNDD--------LWL 236

Query: 337 KPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHV 393
            P       A   + +   ++LP++   +   +R E         GL+R+  F + + + 
Sbjct: 237 SPTAEVPLTAFHRNEIIDPKQLPIKYVAYSPCFRREAGSYGRDTKGLIRLHQFNKVELYW 296

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP----EKRVGSDALWDDAENIMK 449
           FC   +      KI +   SI K       +V + T        R     +W  +    +
Sbjct: 297 FCDPSKSLEAHKKITSDAESILKKLNLPYRLVDICTGDLGFSSSRTFDLEVWLPSSKCYR 356

Query: 450 GV 451
            +
Sbjct: 357 EI 358


>gi|269926946|ref|YP_003323569.1| glycyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
 gi|269790606|gb|ACZ42747.1| glycyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
          Length = 457

 Score = 76.7 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 46/342 (13%), Positives = 105/342 (30%), Gaps = 47/342 (13%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPS 374
            N            +     L+P         F++  + S ++LP  +A+ G  YRNE +
Sbjct: 145 FNTMFKTFVGPVENEAAVAYLRPETAQAIFVQFSNVLMTSRKKLPFGIAQIGRAYRNEIT 204

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              + + R R F Q +   F    +         N  I  +   G  +  ++L    ++ 
Sbjct: 205 PG-NFIFRSREFEQMELEYFVRPGEDDKWYDYWRNFAIDWFVSLGVSRERLRLKEHAKE- 262

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
               + +  A   +   L     +    I              + +Y LK  +    Q  
Sbjct: 263 --DLSHYSKATTDL-EYLYPFGWNELWGI------------ANRTDYDLKAHMAVSGQ-- 305

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK----------- 543
                          Y +  ++      +     G    F+  +++ +            
Sbjct: 306 ------------QLTYYDEETKSHIVPYVIEPSLGVDRSFLVFLLDAYHEEPDNEGTRVV 353

Query: 544 GNLPLWLSPIQAIVTTITSSA--VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
                 ++P++  V  ++     ++ A EI + L    + +       +I  + R     
Sbjct: 354 LRFHPRIAPVKVAVLPLSRKEPLIKIAWEIRDRL--ADVYVTDYDETGSIGRRYRRQDEI 411

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             P  +    +   + ++ IR   +    +VS+ +   +L  
Sbjct: 412 GTPYCVTVDFQTLEDNAVTIRDRDTMQQDRVSISELESVLKD 453


>gi|68305000|gb|AAY90011.1| predicted glycyl-tRNA synthetase [uncultured bacterium BAC13K9BAC]
          Length = 446

 Score = 76.7 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 73/419 (17%), Positives = 138/419 (32%), Gaps = 70/419 (16%)

Query: 270 RKGWKIFQTLISYMRRKIKDDYEEIN---TPQVLDQHLWQQSGHWD-------------- 312
             G ++   L S   + I  + +++    T  +    + + SGH D              
Sbjct: 32  PLGVELKNNLKSAWWKSIVYNRDDVEGLDTSILTHPDVLKYSGHEDTFTDPLVDCKSCGL 91

Query: 313 SYRANMFAVKCADDTIKDLRTF------------------ALKPMNCPGHVAVFNHGLKS 354
            +R +    +C D+ + + R F                   L+P         F + L S
Sbjct: 92  RFREDQVPDQCKDEELTEPRDFNLMFKTNVGPVTDDSSLAYLRPETAQQIYINFKNVLDS 151

Query: 355 -YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
             R LP  +A+ G  +RNE +   + + RVR F Q +   F           K     +S
Sbjct: 152 TSRSLPFGIAQIGKSFRNEITPR-NFIFRVREFEQMELEFFVLPGDDEVWHQKWIKNRVS 210

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA 473
            +K+ G          +     G D          K  +D +      +   G    EG 
Sbjct: 211 WWKEQGIPL----EKLKLLTVTGDDLAHYS-----KSTVDIM-----YKFPHGEEELEGI 256

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
                F+        +D    T QV  N+ S       N +++   P +I     G    
Sbjct: 257 ANRTDFDLGSHTKNQKDLNI-TAQVKNNVDSNTRLAIQNENNDWVVPYVIE-PSAGVDRG 314

Query: 534 FIGIMIENFK------------GNLPLWLSPIQAIVTTITSSAVEYAQ---EIANLLKSH 578
            + I+ E +               L   L+PI+A V  +  +  E  +    I + L+ +
Sbjct: 315 VLAIINEAYTVENLDNDKKRTVLKLRKHLAPIKAAVIPLKRNNEELVKLTHTIKSTLQQY 374

Query: 579 HL-SIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
            +  +  +     I    R+H     P+ I        ++++ +R   +   + ++L +
Sbjct: 375 QIGRVVVENTGN-IGKSYRKHDEIGTPLCITVDFDSLEKKTVTVRDRDTMEQKTIALDE 432


>gi|304316662|ref|YP_003851807.1| glycyl-tRNA synthetase [Thermoanaerobacterium thermosaccharolyticum
           DSM 571]
 gi|302778164|gb|ADL68723.1| glycyl-tRNA synthetase [Thermoanaerobacterium thermosaccharolyticum
           DSM 571]
          Length = 462

 Score = 76.7 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 55/344 (15%), Positives = 113/344 (32%), Gaps = 54/344 (15%)

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEP 373
           + N+        T        L+P    G    F + L++  R++P  + + G  +RNE 
Sbjct: 150 KFNLMFKTFQGVTEDSKSEIYLRPETAQGIFVNFKNVLRTTRRKIPFGIGQIGKSFRNEI 209

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP 431
           +   +   R R F Q +   FC    +  +    K   +   +      E +  +  ++ 
Sbjct: 210 TPG-NFTFRTREFEQMELEFFCKPGEDIEWFNYWKEFCMNWLLNLGLKKENLRFRDHSKE 268

Query: 432 EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK--FEYILKDAIGR 489
           E    S+A  D                    I      G G  +G     ++ LK     
Sbjct: 269 ELSHYSNATTD--------------------IEYRFPFGWGELWGIADRTDFDLK----- 303

Query: 490 DWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK------ 543
                 ++      + F+       +EK  P  I     G+    +  +I+ +       
Sbjct: 304 ----RHMEHSGVDLTYFDPIT----NEKYIPYCIE-PSVGADRVALAFLIDAYNEEEVEE 354

Query: 544 ------GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
                   L   ++PI+A V  ++    + A ++ + L+     ++ D    +I  + R 
Sbjct: 355 NDTRVVLKLHPMIAPIKAAVLPLSKKLGDNAYKLYDDLRKE-FVVDYDETG-SIGKRYRR 412

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
                 P  I       ++ S+ IR   +    ++ + +  P L
Sbjct: 413 QDEIGTPYCITYDFDSLNDESVTIRDRDTMQQVRLKINEVKPYL 456


>gi|171742466|ref|ZP_02918273.1| hypothetical protein BIFDEN_01578 [Bifidobacterium dentium ATCC
           27678]
 gi|171278080|gb|EDT45741.1| hypothetical protein BIFDEN_01578 [Bifidobacterium dentium ATCC
           27678]
          Length = 547

 Score = 76.7 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 57/379 (15%), Positives = 112/379 (29%), Gaps = 48/379 (12%)

Query: 278 TLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALK 337
            L      K  D   E     ++      +    +    NM           +     L+
Sbjct: 158 KLEESYAEKHGDKLPENGLKDIVCPDCGTRGNWTEPRDFNMMLRTHLGPVEDENSLHYLR 217

Query: 338 PMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT 396
           P    G    F +    S  + P  +A  G  +RNE +   + + R R F Q +   F  
Sbjct: 218 PETAQGIFVDFKNVMTSSRSKPPFGIANMGKSFRNEITPG-NFIFRTREFEQMEMEFFVA 276

Query: 397 KEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIK 456
                       +     Y D G +   ++    P+         +   +  K  +D   
Sbjct: 277 PGTDEEWHQYWIDARTQWYIDLGVKPENLRHYEHPK---------EKLAHYSKRTVDIEY 327

Query: 457 NSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE 516
                  + G L G            + +    D          +L      ++  +  E
Sbjct: 328 KFGFQGSDWGELEG------------VANRTDFDLSAHAKHSGEDLS-----YFNQATGE 370

Query: 517 KCHPVMIHRAVFGSIERFIGIMIENFK----------------GNLPLWLSPIQAIVTTI 560
           K  P +I     G     +  +++ +                   L   L+P++A V  +
Sbjct: 371 KYVPYVIE-PAAGLTRSLMAFLVDAYDVDEAPNTKGGVDKRTVLRLDPRLAPVKAAVLPL 429

Query: 561 TSSAV--EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERS 618
           +        AQ +A+ L+ H   I+ D     I  + R       P+ +        +++
Sbjct: 430 SKKPELQSVAQNLADDLRQHDWMIDYDEAGA-IGRRYRREDEIGTPLCVTVDFDTLDDQA 488

Query: 619 IGIRRFGSTTTQKVSLLDA 637
           + IR   +   ++V+L   
Sbjct: 489 VTIRERDTMQQERVALDKV 507


>gi|150002813|ref|YP_001297557.1| glycyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482]
 gi|254882314|ref|ZP_05255024.1| glycyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
 gi|294777258|ref|ZP_06742713.1| glycine--tRNA ligase [Bacteroides vulgatus PC510]
 gi|319643076|ref|ZP_07997707.1| glycyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
 gi|149931237|gb|ABR37935.1| glycyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482]
 gi|254835107|gb|EET15416.1| glycyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
 gi|294448878|gb|EFG17423.1| glycine--tRNA ligase [Bacteroides vulgatus PC510]
 gi|317385244|gb|EFV66192.1| glycyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
          Length = 513

 Score = 76.7 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 58/345 (16%), Positives = 112/345 (32%), Gaps = 54/345 (15%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    + +  K+   ++P  +A+ G  +RNE  
Sbjct: 194 FNLMFSTEMGSTADGAMKIYLRPETAQGIFVNYLNVQKTGRMKIPFGIAQIGKAFRNEIV 253

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
            +   + R+R F Q +   F     E  +    K   L       FG +        +  
Sbjct: 254 -ARQFIFRMREFEQMEMQFFVKPGTELEWFPKWKETRLKWHKALGFGDDHYRFHDHDKLA 312

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
                    + A +I            +  +  G    EG      F+            
Sbjct: 313 HYA------NAATDI------------EFLMPFGFKEVEGIHSRTNFD------------ 342

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM--------IENFKG 544
              +        +   ++    +E   P +I  ++ G    F+ IM        +EN + 
Sbjct: 343 ---LSQHEKFSGKSIKYFDPELNESYTPYVIETSI-GVDRMFLSIMSAAYTEETLENGET 398

Query: 545 ----NLPLWLSPIQAIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
                LP  L+P++  V  +       E A+EI N LK  H   + D ++ +I  + R  
Sbjct: 399 RVVLKLPAALAPVKLAVMPLVKKDGLPEKAREIMNDLK-FHFHCQYDEKD-SIGKRYRRQ 456

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
                P  I    +   +  + +R   +   ++V++ +   I+  
Sbjct: 457 DAIGTPYCITVDHQTLEDNCVTLRNRDTMQQERVAISELNNIIAD 501


>gi|325286006|ref|YP_004261796.1| glycyl-tRNA synthetase [Cellulophaga lytica DSM 7489]
 gi|324321460|gb|ADY28925.1| glycyl-tRNA synthetase [Cellulophaga lytica DSM 7489]
          Length = 513

 Score = 76.7 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 55/353 (15%), Positives = 111/353 (31%), Gaps = 51/353 (14%)

Query: 308 SGHWDSYRA-NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEF 365
           S +W   +  N+        +        L+P    G    F +  K+   ++P  +A+ 
Sbjct: 186 SKNWTDVKQFNLMFGTKLGASADSAMDLYLRPETAQGIFVNFLNVQKTGRMKIPFGIAQI 245

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
           G  +RNE   +   + R R F Q +   F                 I  +   G  +   
Sbjct: 246 GKAFRNEIV-ARQFIFRQREFEQMEMQFFVRPGTQKEWYEAWKQNRIKWHLSLGIGEDNY 304

Query: 426 KLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKD 485
           +     +    +DA  D                 + +   G    EG      F+     
Sbjct: 305 RFHDHDKLAHYADAAADI----------------EFKFPFGFKELEGIHSRTDFDL---- 344

Query: 486 AIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI----MIEN 541
           +         +Q              +  +E   P ++  ++ G    F+ +    +IE 
Sbjct: 345 SSHEKHSGKKLQYFD-----------HEINESYVPYVVETSI-GLDRMFLAVFSNSLIEE 392

Query: 542 --------FKGNLPLWLSPIQAIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
                       LP  L+P +A +  +       + A+EI   LK     +  D ++  +
Sbjct: 393 ELENGSTRTVLKLPAVLAPTKAAILPLVKKDGLPDVAKEIIEDLK-WDFKVIYDEKDA-V 450

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
             + R       P  I    +   ++++ IR   +   ++V++ D   I+  E
Sbjct: 451 GRRYRRQDANGTPFCITVDHQTLEDKTVTIRHRDTMEQKRVAIADLKSIINAE 503


>gi|317506968|ref|ZP_07964737.1| glycyl-tRNA synthetase [Segniliparus rugosus ATCC BAA-974]
 gi|316254726|gb|EFV14027.1| glycyl-tRNA synthetase [Segniliparus rugosus ATCC BAA-974]
          Length = 466

 Score = 76.7 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 62/337 (18%), Positives = 116/337 (34%), Gaps = 21/337 (6%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            NM           +     L+P    G    F + + +  R+ P  +A+ G  +RNE +
Sbjct: 143 FNMMLKTHLGPIETEEGMHYLRPETAQGIFVNFANVVTTARRKPPFGIAQIGKSFRNEIT 202

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              + + R R F Q +   F              +  +  Y D G +   ++L   P+++
Sbjct: 203 PG-NFIFRTREFEQMEMEFFVEPATAAEWHQHWIDTRLQWYVDLGIDPENLRLYEHPKEK 261

Query: 435 V--GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
           +   SD   D          +  +           L       G    Y  + A  R + 
Sbjct: 262 LSHYSDRTVDIEYRFRFQGSEWGELEGVANRTDFDLSTHAKHSGVDLSYYDQ-AEDRRYT 320

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
              I+    L     AF V++++E   P        G  +R +          L   L+P
Sbjct: 321 PYVIEPAAGLTRSLMAFLVDAYAEDEAPNTKG----GVDKRTV--------LRLDPRLAP 368

Query: 553 IQAIVTTITSS--AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           ++A V  +      V  A+E+A  L+    +I+ D     I  + R       P  I   
Sbjct: 369 VKAAVLPLQKDGELVGKAKELAARLRKR-WNIDYDETQA-IGRRYRRQDEIGTPFCITVD 426

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLP 647
            +   ++++ IR   + + ++V+L      L +   P
Sbjct: 427 FESLEDQAVTIRERDTMSQERVALDQVGRYLLERLDP 463


>gi|225010202|ref|ZP_03700674.1| glycyl-tRNA synthetase [Flavobacteria bacterium MS024-3C]
 gi|225005681|gb|EEG43631.1| glycyl-tRNA synthetase [Flavobacteria bacterium MS024-3C]
          Length = 514

 Score = 76.7 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 60/352 (17%), Positives = 114/352 (32%), Gaps = 51/352 (14%)

Query: 308 SGHWDSYRA-NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEF 365
           SG+W   +  N+        +        L+P    G    F +  K+   ++P  +A+ 
Sbjct: 186 SGNWTDVKQFNLMFGTKIGASADSAMDLYLRPETAQGIFVNFLNVQKTGRMKIPFGIAQI 245

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
           G  +RNE   +   + R R F Q +   F           K     I  +   GF     
Sbjct: 246 GKAFRNEIV-ARQFIFRQREFEQMEMQFFVRPGTQKEWYDKWKETRIKWHYSLGFSADNY 304

Query: 426 KLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKD 485
           +     +    +DA  D                 + +   G    EG      F+     
Sbjct: 305 RFHDHDKLAHYADAAADI----------------EFKFPFGFKELEGIHSRTDFDL---- 344

Query: 486 AIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM------- 538
           +         +Q           F+    +E   P ++  ++ G    F+ I        
Sbjct: 345 SSHEKHSGKKLQ-----------FFDPELNESYVPYVVETSI-GVDRMFLAIFSKSLEEE 392

Query: 539 -IENFKG----NLPLWLSPIQAIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
            +EN        LP  L+P +A +  +       E A EI   L+    ++  D ++  +
Sbjct: 393 TLENGSTRTVLKLPAVLAPTKAAILPLVKKDGLSELAHEIFQELQ-WDFAVSYDEKDA-V 450

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             + R       P  I    +   ++++ IR   S   ++V++ D   I+ +
Sbjct: 451 GRRYRRQDALGTPFCITVDHQTKEDQTVTIRHRDSMEQERVAVKDLAGIIEQ 502


>gi|282881885|ref|ZP_06290536.1| histidine--tRNA ligase [Peptoniphilus lacrimalis 315-B]
 gi|300813282|ref|ZP_07093639.1| histidine--tRNA ligase [Peptoniphilus sp. oral taxon 836 str.
           F0141]
 gi|281298294|gb|EFA90739.1| histidine--tRNA ligase [Peptoniphilus lacrimalis 315-B]
 gi|300512607|gb|EFK39750.1| histidine--tRNA ligase [Peptoniphilus sp. oral taxon 836 str.
           F0141]
          Length = 435

 Score = 76.7 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 56/448 (12%), Positives = 119/448 (26%), Gaps = 81/448 (18%)

Query: 259 AEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRAN 317
                G +    K   +F  +   +R+  +   +  I+TP +               ++ 
Sbjct: 6   PSTLPGFMELLPKEQILFNQMRDIIRKNFERAGFLPIDTPVI--------------EKSE 51

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAV------FNHGLKSYRELPVRLAEFGSVYRN 371
           +   K   +T K +  F     +      +      +     S    P +    G VYR 
Sbjct: 52  VLLAKGGGETEKQIYRFTKGDTDMSLRFDLTVPLARYTVEHFSELSFPFKRYAIGKVYRG 111

Query: 372 EPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF------------- 418
           E +       R R F Q D       E       +   +I   +KD              
Sbjct: 112 EKAQK----GRFREFYQCDIDTIGNGELSIANDAEFPVVIYHTFKDLGFSDFTIHLNNRR 167

Query: 419 ---GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDT-IKNSSQDRINTGVLLGEG-- 472
              GF   +    ++   R          EN++K + ++ I      +I   + +     
Sbjct: 168 ILKGFFAWLGVSDSQNALRAVDKIEKIGPENVLKELEESGIDREKGKKILEFIEIKGTND 227

Query: 473 ----AFYGPKFEY----ILKDAIGRDWQCGTIQVDFNLPSRFNAF----------YVNSH 514
               A      +        D +     C           R +             V   
Sbjct: 228 EIIQALKDLNIDEETFNQGLDEMSELISCIKAYNIDEKNYRIDLKIARGLDYYTGTVYET 287

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP-------LWLSPIQAIVTTITSS---- 563
           +   +P +      G  +       E     +        L+    QA + +        
Sbjct: 288 TLDDYPKIGSVCSGGRYDNLASYYTEKTLPGVGISIGLSRLFYQLEQAKIISAEDKSLID 347

Query: 564 --------AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEAS 615
                    +    ++   L+  ++ +     +  +  K +     K+P  I+ G+ E  
Sbjct: 348 IIILPMDGFIHEGIKLLAKLREKNVKVTIYSEDAKLGKKFKYADQIKVPYAIVLGENEVK 407

Query: 616 ERSIGIRRFGSTTTQKVSLLDAIPILTK 643
                +R   +   ++V     +   +K
Sbjct: 408 NGLYSLRNMATGEQEEVDFNKLVEKFSK 435


>gi|291299567|ref|YP_003510845.1| glycyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728]
 gi|290568787|gb|ADD41752.1| glycyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728]
          Length = 461

 Score = 76.7 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 53/353 (15%), Positives = 114/353 (32%), Gaps = 54/353 (15%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N            +     L+P    G    F + + S  ++ P  +A+ G  +RNE +
Sbjct: 140 FNTMMKTFLGPIESEDNAHFLRPETAQGIFVNFANVMTSARKKPPFGIAQVGKSFRNEIT 199

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              + + R R F Q +   F              N   + Y D G  +  ++    P+  
Sbjct: 200 PG-NFIFRTREFEQMEMEFFVEPGSDEEWHEFWLNERWNWYTDLGISEENIRRYEHPK-- 256

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI--LKDAIGRDWQ 492
                             D + + ++  ++     G G   G +F+ +  + +    D  
Sbjct: 257 ------------------DKLAHYAKRTVDIEYRFGFG---GKEFDELEGIANRTDFDLS 295

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK--------- 543
           C T     +L      ++  +  E+  P +I     G     +  ++E +          
Sbjct: 296 CHTTASGVDLS-----YFDQAKGERWTPYVIE-PAAGLTRSVLAFLMEAYDVDEAPNTKG 349

Query: 544 -------GNLPLWLSPIQAIVTTIT--SSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
                        L+P++  V  ++        A+++A  L+     ++ D     I  +
Sbjct: 350 GIDKRTVLRFDPRLAPVKVAVLPLSRNEKLSPKARDLAKDLRKR-WVVDFDDAGA-IGRR 407

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLP 647
            R       P+ +        + ++ +R   +   ++V+L      L  E LP
Sbjct: 408 YRRADEIGTPLCVTVDFDTLDDDAVTVRDRDTMKQERVALSQVESYLI-ERLP 459


>gi|33636681|gb|AAQ23638.1| AT04665p [Drosophila melanogaster]
          Length = 335

 Score = 76.7 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 61/286 (21%), Positives = 101/286 (35%), Gaps = 30/286 (10%)

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN-L 410
             SYR+LP+RL + G  +R+E      GLMR + F   D + F   E+   E   + N  
Sbjct: 7   PISYRQLPLRLFQIGPKFRDELKTRF-GLMRAKEFLMKDMYSFDVSEETAMETYTVVNAA 65

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
              ++K      + V  +T       S      +      +L    +S     N+ V+  
Sbjct: 66  YDRLFKQLEVPFVKVNAATGIMGGSVSHEYHYVSPVGEDNLLQC--SSCGFAGNSEVVKA 123

Query: 471 EGAFYGPKF-EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG 529
             +   P      LK+  G +    T  +         A ++N+  +    VM    +  
Sbjct: 124 PAS--CPSCNSSDLKEVRGVEV-AHTFLLGDKYSKPLGATFLNTTGKPQSLVMGCYGI-- 178

Query: 530 SIERFIGIMIE----NFKGNLPLWLSPIQAIVT--TITSSAVEYAQEIANLLKSH----- 578
            I R I   +E    + +   P  L+P    +      S     A+ I N L  +     
Sbjct: 179 GITRVIAAALEVLSSDHELRWPKLLAPYDVCLIGPKQGSKEQPEAEVIENELLLNVGEIC 238

Query: 579 -HLSIETDFRNE-TINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
            H  +  D R E TI  ++ E      P+ I+ G K        +R
Sbjct: 239 GHQELLHDDRKELTIGKRLLEAKRLGHPLTIVVGAK-------SVR 277


>gi|154484526|ref|ZP_02026974.1| hypothetical protein EUBVEN_02240 [Eubacterium ventriosum ATCC
           27560]
 gi|149734374|gb|EDM50291.1| hypothetical protein EUBVEN_02240 [Eubacterium ventriosum ATCC
           27560]
          Length = 465

 Score = 76.7 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 41/330 (12%), Positives = 96/330 (29%), Gaps = 21/330 (6%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPS 374
            N+        T     T  L+P    G    F +  + S +++P  + + G  +RNE +
Sbjct: 151 FNLMFKTFQGVTEDAKNTVYLRPETAQGIFVNFKNVQRTSRKKIPFGIGQVGKSFRNEIT 210

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              +   R R F Q +   FC                       G ++  ++L     + 
Sbjct: 211 PG-NFTFRTREFEQMELEFFCEPGTDLEWFQYWRAFCRDWLLSLGIKEDEMRLRDHSPEE 269

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP-KFEYILKDAIGRDWQC 493
           +     +      +   L          I               K +    D    +   
Sbjct: 270 L---CFYSKGTTDI-EFLFPFGWGELWGIADRTDYDLTQHQELSKQDLTYFDDDKHERYV 325

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI 553
             +        R    ++ +  ++ +     +    ++  F               L+P+
Sbjct: 326 PYVIEPSLGADRVTLAFLCAAYDEENIGTEEKPDMRTVLHFH------------PALAPV 373

Query: 554 QAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
           +  V  ++    E A+++   L  +  + E D R   I  + R       P  +      
Sbjct: 374 KIGVLPLSKKLNEGAEKVFAELSKY-YNCEFDDRGA-IGKRYRRQDEIGTPFCVTYDFDS 431

Query: 614 ASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             + ++ +R   +   +++ + D      +
Sbjct: 432 EEDGAVTVRDRDTMEQERIKIEDLKEYFEQ 461


>gi|167044442|gb|ABZ09118.1| putative tRNA synthetase class II core domain (G, H, P, S and T)
           [uncultured marine crenarchaeote HF4000_APKG6D9]
          Length = 485

 Score = 76.7 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 64/344 (18%), Positives = 120/344 (34%), Gaps = 24/344 (6%)

Query: 319 FAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR-ELPVRLAEFGSVYRNEPSGSL 377
           F +        +     L+P  C      F    K+ R +LP+ + + G  +RNE +   
Sbjct: 142 FNMMFKVGIGPEEEEAYLRPETCQSIFVDFPRLYKTMRGKLPLGIGQVGKSFRNEIAPR- 200

Query: 378 HGLMRVRGFTQDDAHVFCTKEQMFN--ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
             L+R+R F Q +  VFC   ++    +  +I + I+ I  D     +  K +       
Sbjct: 201 QSLLRLREFYQAEIEVFCNPAKLDQVEKFDEIQDTILRIQTDSDPVAMTCKEAVESGVIP 260

Query: 436 GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG-PKFEYILKDAIG-RDWQC 493
                +     I+    +             +   E AFY    F++ ++  IG  +   
Sbjct: 261 NKLVAYYL--GILTEFYEKTGIDISKSRFRKLGDKEKAFYAEVAFDFEVETTIGWLELVA 318

Query: 494 GTIQVDFNL----PSRFNAFYVNSHSEKCHPVM------IHRAVFGSIERFIGIMIENFK 543
              + D++L          F V  + EK  P +      I R+++  +E  +    E+ +
Sbjct: 319 CNYRSDYDLSSHAKKSKEKFEVMDNDEKVLPHVFEISMGIDRSLYTILEHSLKEDKEHER 378

Query: 544 GNLP--LWLSPIQAIVT--TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
             L    +LSP    +          E   EI   +K        D     I  + R   
Sbjct: 379 IVLSLKPYLSPTHVGILSLVKKDGLKEKTDEIYLNIKRK-FDAFLDHSGA-IGRRYRRLD 436

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
               P  I    +   + +I IR+  S    ++ + +   IL++
Sbjct: 437 EIGAPFAITVDHQTLEDDTITIRKRDSMEQTRIKISELDSILSE 480


>gi|329934676|ref|ZP_08284717.1| glycyl-tRNA synthetase [Streptomyces griseoaurantiacus M045]
 gi|329305498|gb|EGG49354.1| glycyl-tRNA synthetase [Streptomyces griseoaurantiacus M045]
          Length = 460

 Score = 76.7 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 53/335 (15%), Positives = 105/335 (31%), Gaps = 51/335 (15%)

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
                T        L+P    G    F      S R+ P  +A+ G  +RNE +   + +
Sbjct: 145 THLGPTQDSGSVAYLRPETAQGIFTNFGQVQQTSRRKPPFGIAQMGKSFRNEITPG-NFI 203

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            R R F Q +   F    +             + Y+  G  +  ++    P++++     
Sbjct: 204 FRTREFEQMEMEFFVKPGEDEKWQEYWMEQRWNWYRGLGLSEENMRWYEHPKEKL----- 258

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDF 500
                        +  +     I      G G+ +G      L+    R     +     
Sbjct: 259 -------------SHYSKRTADIEYRFQFG-GSEWG-----ELEGVANRTDYDLSAHS-- 297

Query: 501 NLPSRFNAFYVNSH-SEKCHPVMIHRAVFGSIERFIGIMIE--------NFKGNL----- 546
              S  +  Y +    E+  P +I     G     +  +++        N KG +     
Sbjct: 298 -KASGQDLSYFDQEAGERWTPYVIE-PAAGVGRTMLAFLLDAYVEDEAPNAKGKMEKRTV 355

Query: 547 ---PLWLSPIQAIVTTIT--SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
                 L+P++  V  ++        A+ +A  L+  + +IE D     I  + R     
Sbjct: 356 LRLDPRLAPVKVAVLPLSRNPELSPKAKGLAQALR-QNWNIEFDDAGA-IGRRYRRQDEI 413

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
             P  +        + ++ +R   S   ++VSL  
Sbjct: 414 GTPFCVTVDFDTLEDNAVTVRERDSMKQERVSLDQ 448


>gi|284046709|ref|YP_003397049.1| glycyl-tRNA synthetase [Conexibacter woesei DSM 14684]
 gi|283950930|gb|ADB53674.1| glycyl-tRNA synthetase [Conexibacter woesei DSM 14684]
          Length = 456

 Score = 76.7 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 60/351 (17%), Positives = 115/351 (32%), Gaps = 55/351 (15%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPS 374
            N+              T  L+P    G    F + L+ + R+ P  +A+ G  +RNE +
Sbjct: 135 FNLMFETTVGPVRDAGATVYLRPETAQGIFINFKNVLQFARRKPPFGIAQVGKSFRNEIT 194

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              + + R R F Q +   F   +          +     Y + G     ++L    +  
Sbjct: 195 PG-NFIFRTREFEQMEMEFFVPPDDAPRWFAHWLSERERWYHELGIRPDHLRLRAHDQDE 253

Query: 435 V-----GSDAL-------WDDAENIMKGV---LDTIKNSSQDRINTGVLLGEGAFYGPKF 479
           +     G+  +       W + E I       L+  + +S +++   +  G G  Y P  
Sbjct: 254 LSHYSSGTSDVEYLFPIGWSELEGIANRGEFDLNAHRTASGEKLEY-MDPGTGERYTPHV 312

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
              ++ A G D       VD      ++   V   +         R V     R      
Sbjct: 313 ---IEPAAGADRATLAFLVDA-----YDEEEVEGDT---------RTVLRLHPR------ 349

Query: 540 ENFKGNLPLWLSPIQAIVTTITSS--AVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
                     L+P++  V  +       E A+EI   L+      E D    +I  + R 
Sbjct: 350 ----------LAPVKVAVMPLLKKGGHPELAREIFADLRVRMQG-EYDE-GGSIGKRYRR 397

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
                 P  +    +   ++++ +R   S    ++++ D  P L +    P
Sbjct: 398 QDEIGTPWGVTIDHQSIEDQTVTLRDRDSLEQVRIAIDDLAPELERRLKAP 448


>gi|325281010|ref|YP_004253552.1| glycyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712]
 gi|324312819|gb|ADY33372.1| glycyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712]
          Length = 517

 Score = 76.7 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 63/372 (16%), Positives = 120/372 (32%), Gaps = 62/372 (16%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           +E     +     W +         N+        T +      L+P    G    F + 
Sbjct: 175 DEKIVCPISGTCNWTEVRQ-----FNLMFATEMGSTAEGASKIYLRPETAQGIFVNFLNV 229

Query: 352 LKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIH 408
            K+   ++P  +A+ G  +RNE   +   + R+R F Q +   F     E  + +  K  
Sbjct: 230 QKTGRMKVPFGIAQIGKAFRNEIV-ARQFIFRMREFEQMEMQFFVRPGSELEWFKKWKTT 288

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
            +       FG E        +           + A +I            + +   G  
Sbjct: 289 RMRWHQLLGFGEENYRFHDHEKLAHYA------NAATDI------------EFKFPFGFK 330

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
             EG      F+     +  + +    IQ                 +E   P +I  ++ 
Sbjct: 331 EVEGIHSRTDFDL----SQHQQYSGKKIQYFD-----------TELNESYVPYVIETSI- 374

Query: 529 GSIERFIGIMIENF---------------KGNLPLWLSPIQAIVTTI--TSSAVEYAQEI 571
           G    F+ IM   +                  LP  L+P++  +  +       E AQEI
Sbjct: 375 GVDRMFLQIMSAAYCEEDLSKDGKQDSRVVLRLPAALAPVKMAIMPLVKKDGLPEKAQEI 434

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
            NLLK +  + + D ++ +I  + R       P  I    +   + ++ IR   +   ++
Sbjct: 435 MNLLK-YDFNCQYDEKD-SIGKRYRRQDAIGTPFCITVDHQTLEDHAVTIRDRDTMQQER 492

Query: 632 VSLLDAIPILTK 643
           V++     IL +
Sbjct: 493 VAIDQLFGILKE 504


>gi|258649081|ref|ZP_05736550.1| glycine--tRNA ligase [Prevotella tannerae ATCC 51259]
 gi|260850716|gb|EEX70585.1| glycine--tRNA ligase [Prevotella tannerae ATCC 51259]
          Length = 513

 Score = 76.7 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 53/345 (15%), Positives = 103/345 (29%), Gaps = 54/345 (15%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T +      L+P    G    + +  K+   +LP  +A+ G  +RNE  
Sbjct: 194 FNLMFKTEVGSTAEGASAIYLRPETAQGIFVNYLNVQKTGRMKLPFGIAQIGKAFRNEIV 253

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
            +   + R+R F Q +   F     E  +    K   +       FG E        +  
Sbjct: 254 -ARQFIFRMREFEQMEMQFFVKPGTEHEWFNRWKEWRMKWHQALGFGAECYRFHDHEKLA 312

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
                                 I+            +     Y                 
Sbjct: 313 HYA--------------NAATDIEFKMPFGFKEVEGIHSRTDY----------------- 341

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK--------- 543
              ++       +   ++    +E   P  I  ++ G    F+ +M   +          
Sbjct: 342 --DLRRHEEFSGKSIKYFDPETNESYTPYDIETSI-GVDRMFLSVMCHAYTEEKLDNGET 398

Query: 544 ---GNLPLWLSPIQAIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
                LP  L+P++  V  +       E A+EI N LK  H + + + ++ TI  + R  
Sbjct: 399 RVVLRLPAALAPVKLAVLPLVRKDGLPEKAREIMNELK-FHFNCKYEEKD-TIGKRYRRA 456

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
                P  I        E ++ +R   + T ++V +     ++  
Sbjct: 457 DAIGTPYCITIDHDTLKENTVTLRDRDTMTQERVPVEQLRALIED 501


>gi|312129532|ref|YP_003996872.1| glycyl-tRNA synthetase [Leadbetterella byssophila DSM 17132]
 gi|311906078|gb|ADQ16519.1| glycyl-tRNA synthetase [Leadbetterella byssophila DSM 17132]
          Length = 485

 Score = 76.7 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 58/364 (15%), Positives = 103/364 (28%), Gaps = 51/364 (14%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E  T  +     W +         N+          +D     L+P    G    F +  
Sbjct: 145 EGITCPISKTSNWTEVRQ-----FNLMFSTQVGSVAEDSSLIYLRPETAQGIFVNFLNVQ 199

Query: 353 KS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI 411
           KS   ++P  +A+ G  +RNE   +     R+R F Q +   F           K     
Sbjct: 200 KSGRMKVPFGIAQIGKAFRNEIV-ARQFTFRMREFEQMEMQFFVRPGSEMEWYEKWKETR 258

Query: 412 ISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
           +  +K  G     +K     +           A      V    +     R   G+    
Sbjct: 259 MRFHKAIGLPAEKLKYHDHEK----------LAHYANAAVDIEFEFPFGFREIEGIHS-- 306

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIH--RAVFG 529
                 + ++ L++           Q       ++    +    +     + +      G
Sbjct: 307 ------RTDFDLRNH----------QELSKKKLQYFDPDLGEDGKAIGNYIPYVIETSVG 350

Query: 530 SIERFIGIMI----------ENFKGNLPLWLSPIQAIVTTI--TSSAVEYAQEIANLLKS 577
           +   F+              E     L   LSPI+A V  +       E AQEIA  L+ 
Sbjct: 351 ADRMFLAAFCNAYTVETGEKERTYLKLHPALSPIKAAVLPLVKKDGLAEKAQEIAASLR- 409

Query: 578 HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
            H     D     I  +     +   P  I    +     ++ IR   S   ++V +   
Sbjct: 410 LHFRTVYDEGGA-IGKRYTRQDLIGTPFCIAVDYETMENNTVTIRHRDSMEQERVPIDQL 468

Query: 638 IPIL 641
              +
Sbjct: 469 KEKI 472


>gi|295394795|ref|ZP_06805010.1| glycyl-tRNA synthetase beta subunit [Brevibacterium mcbrellneri
           ATCC 49030]
 gi|294972391|gb|EFG48251.1| glycyl-tRNA synthetase beta subunit [Brevibacterium mcbrellneri
           ATCC 49030]
          Length = 458

 Score = 76.7 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 56/387 (14%), Positives = 130/387 (33%), Gaps = 53/387 (13%)

Query: 277 QTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF-A 335
             + +Y+ +  K+   E     + D    Q  G+W   +     +K     + D +    
Sbjct: 101 HLIEAYVAKHGKE--PENGLADINDPETGQ-PGNWTEPQQFSGLMKTFLGAVDDGQGLHY 157

Query: 336 LKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           L+P    G    FN+ + +  R+ P  + + G  +RNE +   + + R R F Q +   F
Sbjct: 158 LRPETAQGIFVNFNNVVTAARRKPPFGIGQVGKAFRNEITPG-NFIFRTREFEQMEIEYF 216

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDT 454
              +       +  +   + + D G     ++   + +      A + DA   ++     
Sbjct: 217 THPDDAQKYFDEWVDACWNWFVDLGINPDNMR---KFDVPADERAHYSDATIDLE----- 268

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH 514
                      G L+G       + ++ L +    +     +Q               + 
Sbjct: 269 -YKFGFQGNPWGELMGVAN----RTDFDLSNHT--EASGAKLQYFDQ-----------AT 310

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIENFK----------------GNLPLWLSPIQAIVT 558
            ++  P +I    FG     +  +++ +                   L   L+P++A V 
Sbjct: 311 GDRYTPYVIE-PSFGLTRSMMAFLVDAYSEDEAPNTKGGTDKRIVLKLDPRLAPVKAAVL 369

Query: 559 TIT--SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASE 616
            ++        A+ +A  L+    +I+ D     I  + R       P  I        +
Sbjct: 370 PLSRNEKLSPQARALAANLRKR-WNIDFDDAGA-IGRRYRRQDEIGTPFCITFDFDSLDD 427

Query: 617 RSIGIRRFGSTTTQKVSLLDAIPILTK 643
            ++ +R+    + +++++ D    L +
Sbjct: 428 NAVTVRKRDDMSQERIAIDDVENYLAQ 454


>gi|239941025|ref|ZP_04692962.1| glycyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
 gi|239987504|ref|ZP_04708168.1| glycyl-tRNA synthetase [Streptomyces roseosporus NRRL 11379]
 gi|291444465|ref|ZP_06583855.1| glycyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
 gi|291347412|gb|EFE74316.1| glycyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
          Length = 460

 Score = 76.7 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 54/326 (16%), Positives = 105/326 (32%), Gaps = 23/326 (7%)

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPSGSLHGL 380
                T        L+P    G    F   L+ S ++ P  +A+ G  +RNE +   + +
Sbjct: 145 THLGPTQDSGSVAYLRPETAQGIFTNFGQVLQTSRKKPPFGIAQMGKSFRNEITPG-NFI 203

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            R R F Q +   F    +         +   + Y D G  +  ++    P+        
Sbjct: 204 FRTREFEQMEMEFFVKPGEDEEWQQYWMDQRWNWYTDLGMREENMRWYEHPK-------- 255

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDF 500
            +   +  K   D            G L G       + +Y LK              D 
Sbjct: 256 -EKLSHYSKRTADIEYRFRFGGSEWGELEGVAN----RTDYDLKAHSEASGTDLRYH-DQ 309

Query: 501 NLPSRFNAFYVNSHSEKCHPVM---IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIV 557
               R+  + +   +     ++   +   V        G+M +     L   L+P++  V
Sbjct: 310 EAQERWTPYVIEPAAGVGRAMLAFLLDAYVEDEAPNAKGVMEKRTVMRLDPRLAPVKVAV 369

Query: 558 TTITSSA--VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEAS 615
             ++ +A     A+ +A  L+ +  +IE D     I  + R       P  +        
Sbjct: 370 LPLSRNAQLSPKAKGLAADLRKN-WNIEFDDAGA-IGRRYRRQDEIGTPFCVTVDFDTLD 427

Query: 616 ERSIGIRRFGSTTTQKVSLLDAIPIL 641
           + ++ +R   +   ++VSL      L
Sbjct: 428 DNAVTVRERDTMKQERVSLDQIQAYL 453


>gi|315427010|dbj|BAJ48627.1| glycyl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum]
          Length = 481

 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 56/338 (16%), Positives = 112/338 (33%), Gaps = 22/338 (6%)

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF-NHGLKSYRELPVRLAEFGSVYRNEP 373
           + ++F +              L+P  C      F      S R+LP+ LA+ G  +RNE 
Sbjct: 137 KVSLFNMMFGVSLGASGDEGYLRPETCQNIFIDFPRVYKISRRKLPLALAQVGKSFRNEI 196

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
           S     L+R+R FTQ +  VF                   +    G     +      E 
Sbjct: 197 SPR-QSLIRLREFTQAEIEVFFNPRTANEFAKAKTVADKELNMWVGERVEKITCERAVES 255

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP-KFEYILKDAIG-RDW 491
            + S  L      +++     +   S       +   E AFY    ++  +  + G  + 
Sbjct: 256 GLVSSWLVAYYLWLVQDFYFRLGIGSDRLRFRRLGDDEKAFYAAEAWDLEVLTSTGWVEL 315

Query: 492 QCGTIQVDFNLPSRFN----AFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK---- 543
                + D++L            V    E   P +   ++   ++R +  ++E+      
Sbjct: 316 VACNNRTDYDLGGHQRVSGVDLRVTEDGESFLPHVFELSM--GVDRSLLALLEHGYVQEN 373

Query: 544 ----GNLPLWLSPIQAIVTTITS--SAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
                 L   L+P    V  +       + AQ++ N L+        D +  +I  + R 
Sbjct: 374 GRSVLRLHPALAPYTIAVFPLLDRPELTQVAQQLYNKLQ-LDFDTFYDEKG-SIGRRYRR 431

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
                 P  I    +   + ++ +R   +   ++V++ 
Sbjct: 432 QDEIGTPFCITVDYQTLEDNTVTVRDRDTMKQERVNIE 469


>gi|145595945|ref|YP_001160242.1| glycyl-tRNA synthetase [Salinispora tropica CNB-440]
 gi|145305282|gb|ABP55864.1| glycyl-tRNA synthetase [Salinispora tropica CNB-440]
          Length = 459

 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 49/351 (13%), Positives = 105/351 (29%), Gaps = 50/351 (14%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPS 374
            N            D     L+P    G    + +  + + ++ P  +A+ G  +RNE +
Sbjct: 138 FNGLMKTHLGPVESDEGLHYLRPETAQGIFVNYKNVEMVARKKPPFGIAQTGKSFRNEIT 197

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              + + R R F Q +   F                  + Y D G  +  ++    P+  
Sbjct: 198 PG-NFIFRTREFEQMEMEFFVEPGTDEGWHEYWLAERWNWYLDLGLSERNLRRYEHPQ-- 254

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
                  +   +  K  +D              L G            + +    D    
Sbjct: 255 -------EKLSHYSKRTVDIEYRFQFGGTEFAELEG------------IANRTDFDLSTH 295

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK----------- 543
           +     +L      ++  +  E+  P +I     G     +  ++E +            
Sbjct: 296 SKHSGVDLS-----YFDQARGERWVPYVIE-PAAGLTRAVLAFLLEAYDEDEAPNTKGGV 349

Query: 544 -----GNLPLWLSPIQAIVTTIT--SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                      L+P++  V  ++   +    A+++A  L+     +E D     I  + R
Sbjct: 350 DKRTVMRFDPRLAPVKVAVLPLSRNEALSPKARKLATDLRKR-WVVEFDDSQA-IGRRYR 407

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLP 647
                  P  +        + ++ +R   +   +++SL      L  E LP
Sbjct: 408 RQDEIGTPYCVTVDFDTLDDDAVTVRNRDTMAQERISLDQVERYLI-ERLP 457


>gi|306822376|ref|ZP_07455755.1| glycyl-tRNA synthetase beta subunit [Bifidobacterium dentium ATCC
           27679]
 gi|304554374|gb|EFM42282.1| glycyl-tRNA synthetase beta subunit [Bifidobacterium dentium ATCC
           27679]
          Length = 547

 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 57/379 (15%), Positives = 111/379 (29%), Gaps = 48/379 (12%)

Query: 278 TLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALK 337
            L      K  D   E     ++      +    +    NM           +     L+
Sbjct: 158 KLEESYAEKHGDKLPENGLKDIVCPDCGTRGNWTEPRDFNMMLRTHLGPVEDENSLHYLR 217

Query: 338 PMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT 396
           P    G    F +    S  + P  +A  G  +RNE +   + + R R F Q +   F  
Sbjct: 218 PETAQGIFVDFKNVMTSSRSKPPFGIANMGKSFRNEITPG-NFIFRTREFEQMEMEFFVA 276

Query: 397 KEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIK 456
                       +     Y D G +   ++    P+         +   +  K  +D   
Sbjct: 277 PGTDEEWHQYWIDARTQWYIDLGVKPENLRHYEHPK---------EKLAHYSKRTVDIEY 327

Query: 457 NSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE 516
                  + G L G            + +    D          +L      ++  +  E
Sbjct: 328 KFGFQGSDWGELEG------------VANRTDFDLSAHAKHSGEDLS-----YFNQATGE 370

Query: 517 KCHPVMIHRAVFGSIERFIGIMIENFK----------------GNLPLWLSPIQAIVTTI 560
           K  P +I     G     +  +++ +                   L   L+P++A V  +
Sbjct: 371 KYVPYVIE-PAAGLTRSLMAFLVDAYDVDEAPNTKGGVDKRTVLRLDPRLAPVKAAVLPL 429

Query: 561 TSSAV--EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERS 618
           +        AQ +A  L+ H   I+ D     I  + R       P+ +        +++
Sbjct: 430 SKKPELQSVAQNLAADLRQHDWMIDYDEAGA-IGRRYRREDEIGTPLCVTVDFDTLDDQA 488

Query: 619 IGIRRFGSTTTQKVSLLDA 637
           + IR   +   ++V+L   
Sbjct: 489 VTIRERDTMQQERVALDKV 507


>gi|312875916|ref|ZP_07735906.1| glycyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
 gi|311797397|gb|EFR13736.1| glycyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
          Length = 434

 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 69/450 (15%), Positives = 148/450 (32%), Gaps = 91/450 (20%)

Query: 251 REMDLFH---IAEDGSGVIFWHRKGWKIFQTLISYMRR---KIKDDYEEINTPQVLDQHL 304
           R   +F    I    +    +   G ++   +     +   +++DD   +++  +++  +
Sbjct: 13  RRGFIFQSSEIYGGLNSCWDYGPLGVEMKNNIKRLWWKANVQLRDDVVGLDSSILMNPKV 72

Query: 305 WQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA---VFNHGLKSY------ 355
           W+ SGH  ++   M   K      +  +    K   C G +    +FN   K++      
Sbjct: 73  WEASGHLSNFADPMADCKVCKKRWRVDQLQEYKCPECGGELTEARMFNLMFKTFMGPVED 132

Query: 356 ---------------------------RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQ 388
                                      ++LP  +A+ G  +RNE +   + + R R F Q
Sbjct: 133 ESAVVYLRPETAQGIFVNFINVQQTMRKKLPFGIAQIGKSFRNEITPG-NFIFRTREFEQ 191

Query: 389 DDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIM 448
            +   F                 I+ Y   G +K  +++        G D L   A+  +
Sbjct: 192 MEIEYFVKPGTDEQWHKHWIEQRINWYYKLGIKKENLRIREH-----GKDELAHYAKACV 246

Query: 449 K-GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFN 507
               L  +  S  + I              + ++ L                    S  N
Sbjct: 247 DIEYLFPMGWSELEGI------------ANRTDFDLT--------------QHQKYSGEN 280

Query: 508 AFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK------------GNLPLWLSPIQA 555
             Y +  +++ +   +     G     +  +I+ ++             +L   ++P++A
Sbjct: 281 LTYFDDETKQRYIPYVIEPSAGVDRSLLAFLIDAYEYQQIDKDDFRVVLHLHPAIAPVKA 340

Query: 556 IV--TTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
            V         V+ A+EI N LK   + ++ D    +I  + R       P  I    + 
Sbjct: 341 AVFPLMKKEKLVKKAKEIYNELKYKWI-VQYDESG-SIGKRYRRQDEIGTPFGITVDYQT 398

Query: 614 ASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             + ++ IR   +    +V + + IP L +
Sbjct: 399 LEDETVTIRDRDTMEQVRVHIKEIIPYLEE 428


>gi|302545522|ref|ZP_07297864.1| glycine-tRNA ligase [Streptomyces hygroscopicus ATCC 53653]
 gi|302463140|gb|EFL26233.1| glycine-tRNA ligase [Streptomyces himastatinicus ATCC 53653]
          Length = 460

 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 56/355 (15%), Positives = 114/355 (32%), Gaps = 28/355 (7%)

Query: 288 KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
           ++   ++N P   ++  + +   +               T        L+P    G    
Sbjct: 116 ENGMADLNCPHCGNKGSFTEPKQFSG-----LLSTHLGPTQDSGSVAYLRPETAQGIFTN 170

Query: 348 F-NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           F      S R+ P  +A+ G  +RNE +   + + R R F Q +   F    +       
Sbjct: 171 FLAVQQTSRRKPPFGIAQLGKSFRNEITPG-NFIFRTREFEQMEMEFFVKPGEDEQWHEY 229

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
                 + Y+D G ++  ++    P+         +   +  K   D     S      G
Sbjct: 230 WMEQRYNWYRDLGIQESNIRWFEHPK---------EKLSHYSKRTADIEYRFSFGGSEWG 280

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV---MI 523
            L G       + +Y LK       Q  +   D     R+  + +   +     +   M+
Sbjct: 281 ELEGVAN----RTDYDLKAHSAASGQDLS-YFDQEAGERWTPYVIEPAAGVGRAMLAFML 335

Query: 524 HRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT--SSAVEYAQEIANLLKSHHLS 581
              +        G + +     L   L+P++  V  ++        A+ +A  L+ H  +
Sbjct: 336 DAYIEDEAPNAKGKLEKRTVMQLDPRLAPVKVAVLPLSRNPQLSPKAKGLAADLRKH-WN 394

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
           IE D     I  + R       P  +        + ++ +R   +   ++VSL  
Sbjct: 395 IEFDDAGA-IGRRYRRQDEIGTPFCVTVDFDTLDDNAVTVRERDTMKQERVSLDQ 448


>gi|297199539|ref|ZP_06916936.1| glycyl-tRNA synthetase [Streptomyces sviceus ATCC 29083]
 gi|197713535|gb|EDY57569.1| glycyl-tRNA synthetase [Streptomyces sviceus ATCC 29083]
          Length = 460

 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 54/368 (14%), Positives = 109/368 (29%), Gaps = 54/368 (14%)

Query: 288 KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
           ++   ++N P   ++  + +   +               T        L+P    G    
Sbjct: 116 ENGLADVNCPNCGNKGQFTEPKQFSG-----LLSTHLGPTQDSGSVAYLRPETAQGIFTN 170

Query: 348 FNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           F    + S ++ P  +A+ G  +RNE +   + + R R F Q +   F    +       
Sbjct: 171 FAQVQVASRKKPPFGIAQMGKSFRNEITPG-NFIFRTREFEQMEMEFFVKPGEDEKWQEY 229

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
                 + Y   G  +  ++    P          +   +  K   D            G
Sbjct: 230 WMEQRWNWYTGLGLREENMRWYDHPA---------EKLSHYSKRTADIEYRFQFGGNEWG 280

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
            L G                  R     T     +    F  FY     E+  P +I   
Sbjct: 281 ELEG---------------VANRTDYDLTAHSKASGQDLF--FYDQEAGERWTPYVIE-P 322

Query: 527 VFGSIERFIGIMIENFKGNLPLW----------------LSPIQAIVTTITSSAV--EYA 568
             G     +  +++ +  +                    L+P++  V  ++ +A     A
Sbjct: 323 AAGVGRAMLAFLLDAYVEDEAPNAKGKLEKRTVLRLDHRLAPVKVAVLPLSRNAELSPKA 382

Query: 569 QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
           + +A  L+  + +IE D     I  + R       P  +        + ++ +R   S  
Sbjct: 383 KGLAQALR-QNWNIEFDDAGA-IGRRYRRQDEIGTPYCVTVDFDTLDDNAVTVRERDSMK 440

Query: 629 TQKVSLLD 636
            ++VSL  
Sbjct: 441 QERVSLDQ 448


>gi|315427003|dbj|BAJ48621.1| glycyl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum]
 gi|315428091|dbj|BAJ49678.1| glycyl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum]
          Length = 482

 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 56/338 (16%), Positives = 112/338 (33%), Gaps = 22/338 (6%)

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF-NHGLKSYRELPVRLAEFGSVYRNEP 373
           + ++F +              L+P  C      F      S R+LP+ LA+ G  +RNE 
Sbjct: 138 KVSLFNMMFGVSLGASGDEGYLRPETCQNIFIDFPRVYKISRRKLPLALAQVGKSFRNEI 197

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
           S     L+R+R FTQ +  VF                   +    G     +      E 
Sbjct: 198 SPR-QSLIRLREFTQAEIEVFFNPRTANEFAKAKTVADKELNMWVGERVEKITCERAVES 256

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP-KFEYILKDAIG-RDW 491
            + S  L      +++     +   S       +   E AFY    ++  +  + G  + 
Sbjct: 257 GLVSSWLVAYYLWLVQDFYFRLGIGSDRLRFRRLGDDEKAFYAAEAWDLEVLTSTGWVEL 316

Query: 492 QCGTIQVDFNLPSRFN----AFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK---- 543
                + D++L            V    E   P +   ++   ++R +  ++E+      
Sbjct: 317 VACNNRTDYDLGGHQRVSGVDLRVTEDGESFLPHVFELSM--GVDRSLLALLEHGYVQEN 374

Query: 544 ----GNLPLWLSPIQAIVTTITS--SAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
                 L   L+P    V  +       + AQ++ N L+        D +  +I  + R 
Sbjct: 375 GRSVLRLHPALAPYTIAVFPLLDRPELTQVAQQLYNKLQ-LDFDTFYDEKG-SIGRRYRR 432

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
                 P  I    +   + ++ +R   +   ++V++ 
Sbjct: 433 QDEIGTPFCITVDYQTLEDNTVTVRDRDTMKQERVNIE 470


>gi|307329105|ref|ZP_07608272.1| glycyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113]
 gi|306885300|gb|EFN16319.1| glycyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113]
          Length = 460

 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 57/355 (16%), Positives = 114/355 (32%), Gaps = 28/355 (7%)

Query: 288 KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
           ++   ++N P   ++  + +   +               T        L+P    G    
Sbjct: 116 ENGLADVNCPHCGNKGSFTEPKQFSG-----LLATHLGPTQDSGSIAYLRPETAQGIFTN 170

Query: 348 F-NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           F      S R+ P  +A+ G  +RNE +   + + R R F Q +   F    +       
Sbjct: 171 FLAVQQTSRRKPPFGIAQVGKSFRNEITPG-NFIFRTREFEQMEMEFFVKPGEDETWHEY 229

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
                 + Y+D G ++  ++    P+         +   +  K   D     S      G
Sbjct: 230 WMEQRWNWYRDLGLQEANIRWYEHPK---------EKLSHYSKRTADIEYRFSFGGSEWG 280

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV---MI 523
            L G       + ++ LK       Q  +   D     R+  + +   +     +   M+
Sbjct: 281 ELEGLAN----RTDFDLKAHSAASGQDLS-YFDQEAGERWTPYVIEPAAGVGRAMLAFML 335

Query: 524 HRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT--SSAVEYAQEIANLLKSHHLS 581
              V        G M +     L   L+P++  V  ++        A+ +A  L+ H  +
Sbjct: 336 DAYVEDEAPNAKGKMEKRTVMRLDPRLAPVKVAVLPLSRNPQLSPKAKGLAADLRKH-WN 394

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
           IE D     I  + R       P  +        + ++ +R   +   ++VSL  
Sbjct: 395 IEFDDAGA-IGRRYRRQDEIGTPFCVTVDFDTLDDNAVTVRERDTMKQERVSLDQ 448


>gi|222153600|ref|YP_002562777.1| seryl-tRNA synthetase [Streptococcus uberis 0140J]
 gi|254783494|sp|B9DVD8|SYS_STRU0 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|222114413|emb|CAR43194.1| seryl-tRNA synthetase [Streptococcus uberis 0140J]
          Length = 425

 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 84/222 (37%), Gaps = 20/222 (9%)

Query: 242 EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINT 296
           E + H  L  ++D+          G+  +F+   G ++ + L ++M     K+ Y+EI T
Sbjct: 136 EIKAHWDLGEDLDILDWERGAKVTGARFLFYKNLGARLERALYNFMLDEHAKEGYQEIIT 195

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +++      +G +  ++ + F +K ++        F L P         +   +   +
Sbjct: 196 PYMVNHDSMFGTGQYPKFKEDTFELKDSN--------FVLIPTAEVPLTNYYRGEILDGK 247

Query: 357 ELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           +LP+        +R+E   +     GL+R+  F + +   F   E+ + E  K+     +
Sbjct: 248 DLPINFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESYEELEKMTANAEN 307

Query: 414 IYKDFGFEKI----MVKLSTRPEKRVGSDALWDDAENIMKGV 451
           I +                     +     +W  A+N  + +
Sbjct: 308 ILQKLNLPYRVLALCTGDMGFSAAKTYDLEVWIPAQNTYREI 349


>gi|157361671|gb|ABV44793.1| glutamyl-prolyl-tRNA synthetase [Crassostrea ariakensis]
          Length = 153

 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 54/154 (35%), Gaps = 19/154 (12%)

Query: 475 YGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           +    E  +  A GR  Q  T   +  N    F     +  + +     +++  +G   R
Sbjct: 3   FTTTVEAYI-SASGRAIQGATSHHLGQNFSKMFEICIQDQETLEKQ--YVYQNSWGLTTR 59

Query: 534 FIGIMIENFKGNLPLWLSP----IQAIVTT----------ITSSAVEYAQEIANLLKSHH 579
            IG+M      N  L L P    +Q I+                 ++  + +   L +  
Sbjct: 60  TIGVMCMIHGDNKGLVLPPNVASVQVIIVPCGITASLSKKDEQELMDKCEALKKELLALD 119

Query: 580 LSIETDFRNE-TINYKIREHSIKKIPIIIICGDK 612
           +   TD R+  +  +K     +K +PI +  G +
Sbjct: 120 IRARTDLRDNYSPGWKFNHWELKGVPIRVELGPR 153


>gi|296130022|ref|YP_003637272.1| glycyl-tRNA synthetase [Cellulomonas flavigena DSM 20109]
 gi|296021837|gb|ADG75073.1| glycyl-tRNA synthetase [Cellulomonas flavigena DSM 20109]
          Length = 462

 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 59/389 (15%), Positives = 118/389 (30%), Gaps = 57/389 (14%)

Query: 277 QTLISYMRRKIKD---DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
             L  +  +K +       EI  P    +  W +         NM           +   
Sbjct: 104 HLLEDFEAKKGRAPETGLAEIACPNCGTRGQWTEPR-----DFNMMLKTYLGPVEDESGL 158

Query: 334 FALKPMNCPGHVAVFNHGLKSYR-ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
             L+P    G    F +   + R + P  + + G  +RNE +   + + R R F Q +  
Sbjct: 159 HYLRPETAQGIFVNFKNVYTAARMKPPFGIGQIGKSFRNEITPG-NFIFRTREFEQMEME 217

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
            F              +     Y D G  +  ++    P          +   +  K  +
Sbjct: 218 FFVEPGTDETWHQYWIDTRTDWYVDLGIARENLRHYEHPA---------EKLSHYSKRTV 268

Query: 453 DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
           D            G L G            + +    D    +     +L      F+  
Sbjct: 269 DIEYKFGFSGSEWGELEG------------IANRTDFDLGTHSEHSGQDLS-----FFDQ 311

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIENFK----------------GNLPLWLSPIQAI 556
           + +E+  P +I     G     +  ++E++                   L   L+P++A 
Sbjct: 312 AKNERYVPYVIE-PAAGLTRSLMAFLVESYSEDEAPNTKGGVDKRTVLKLDPRLAPVKAA 370

Query: 557 VTTIT--SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
           V  ++        A+++A  L+    +++ D     I  + R       P  I       
Sbjct: 371 VLPLSRNEQLSPKARDLAAELRRS-WNVDFDDAGA-IGRRYRRQDEIGTPFCITVDFDTL 428

Query: 615 SERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            ++++ IR     + Q+V+L      L +
Sbjct: 429 DDQAVTIRHRDDMSQQRVALDQVTGYLAQ 457


>gi|325474209|gb|EGC77397.1| alanyl-tRNA synthetase [Treponema denticola F0402]
          Length = 600

 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/139 (21%), Positives = 62/139 (44%), Gaps = 10/139 (7%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFSSDELAQIEK 124
           D        H+  H++ +A++ +  +     G  I  +   +DF   +P +  E  ++E+
Sbjct: 454 DHSEQTTAYHTATHLLHKALRMVLGDHVQQKGSNITAERLRFDFSHPEPMTEAEKKEVER 513

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLC 183
            + E I  D P   + +  E+A+++        K E        + V +Y+ G++  ++C
Sbjct: 514 LVNEAIKADLPVTMEVMPLEEAKKIGAMALFGEKYE--------DVVKVYKIGDFSTEVC 565

Query: 184 RGPHVRSTGQVKKFFKLMK 202
            GPHV  TG + +F    +
Sbjct: 566 GGPHVERTGSLGRFCIKKE 584


>gi|110639855|ref|YP_680065.1| glycyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406]
 gi|110282536|gb|ABG60722.1| glycyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406]
          Length = 504

 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 63/393 (16%), Positives = 129/393 (32%), Gaps = 50/393 (12%)

Query: 275 IFQTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           + + L   +        +++ T + +   +   S   +  + N+          +D  T 
Sbjct: 131 LVKKLARLLEADDLKGVQDLITNEKITCPVSGTSNWTEVRQFNLMFSTQVGSVAEDSSTI 190

Query: 335 ALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
            L+P    G    F +  KS   ++P  +A+ G  +RNE   +     R+R F Q +   
Sbjct: 191 YLRPETAQGIFVNFLNVQKSGRMKIPFGIAQIGKAFRNEIV-ARQFTFRMREFEQMEMQF 249

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
           F           K     ++ +K  G     +K     +    ++A  D           
Sbjct: 250 FIRPGTEMEWYNKWKESRLNWHKAIGLPAEKLKFHDHEKLAHYANAAVDI---------- 299

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS 513
                 +     G    EG      F+     A  ++      Q   N     +   V  
Sbjct: 300 ------EFEFPFGFKEMEGIHSRTDFDL----ANHQELSKKKQQYFDN-----DIDPVTG 344

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIMI-------------------ENFKGNLPLWLSPIQ 554
            +   +   +     G+   F+ ++                    E     L   L+PI+
Sbjct: 345 KAFGNYVPFVVETSVGADRCFLAVLCNAYTEETTVEQTEEGEKVKERVYLKLHPTLAPIK 404

Query: 555 AIVTTITSSAV--EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
           A +  IT      E A EI N LK + + +  + ++ +I  +   + +   P  I    +
Sbjct: 405 AAILPITKKDGLPEKAMEIYNELK-YDIKVTYEDKD-SIGKRYTRNDLIGTPFCIAVDHQ 462

Query: 613 EASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
              + ++ IR   +T  ++V + +    + KE+
Sbjct: 463 TLEDNTVTIRHRDTTLQERVPISELRLKIRKET 495


>gi|297559717|ref|YP_003678691.1| glycyl-tRNA synthetase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296844165|gb|ADH66185.1| glycyl-tRNA synthetase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 462

 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 59/375 (15%), Positives = 120/375 (32%), Gaps = 25/375 (6%)

Query: 279 LISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKP 338
           L+     K   +  E            + S         +          +    + L+P
Sbjct: 105 LVEAYEEKHGHEPAEGLAAIACPNCGAKDSFTEPRMFNGLLRTYLGPVQDEKGLAY-LRP 163

Query: 339 MNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK 397
               G    + +  +S  R++P  + + G  +RNE +   + + R R F Q +   F   
Sbjct: 164 ETAQGIFINYKNVEQSARRKVPFGIGQIGKSFRNEITPG-NFIFRTREFEQMEMEFFVKP 222

Query: 398 EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKN 457
                      ++    Y D G  K  ++L   P+         +   +  K  +D    
Sbjct: 223 GSDEEWHQHWIDIRHQWYVDLGIAKDNLRLYEHPQ---------EKLSHYSKRTVDIEYR 273

Query: 458 SSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK 517
            +      G L G       + +Y L+              D     R+  + +   +  
Sbjct: 274 FNFQGSEWGELEGIAN----RTDYDLRTHS-EASGVDLSYFDQESNERYIPYVIEPAAGV 328

Query: 518 CHPV---MIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAV--EYAQEIA 572
              V   M+            G + +     L   L+P++A V  ++ +A     A+++A
Sbjct: 329 DRAVLTFMLDAYNVDEAPNAKGKLEKRAVMRLDPRLAPVKAAVLPLSRNADLSPKARDLA 388

Query: 573 NLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
             L+    ++E D     I  + R       P  +        + ++ +R   + + ++V
Sbjct: 389 ARLRKR-WNVEFDDAGA-IGRRYRRQDEIGTPFCVTVDFDTLEDDAVTVRERDTMSQERV 446

Query: 633 SLLDAIPILTKESLP 647
           SL D +     E LP
Sbjct: 447 SL-DRVETYLFERLP 460


>gi|302869265|ref|YP_003837902.1| glycyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029]
 gi|302572124|gb|ADL48326.1| glycyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029]
          Length = 459

 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 51/351 (14%), Positives = 105/351 (29%), Gaps = 50/351 (14%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPS 374
            N            D     L+P    G    + +    + ++ P  +A+ G  +RNE +
Sbjct: 138 FNGLMKTYLGPVESDEGMHYLRPETAQGIFVNYKNVETVARKKPPFGIAQTGKSFRNEIT 197

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              + + R R F Q +   F              +   + Y D G  +  ++    P+  
Sbjct: 198 PG-NFIFRTREFEQMEMEFFVEPGTDEQWHEYWLSERWNWYLDLGLSEENLRFYEHPK-- 254

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
                  +   +  K  +D              L G            + +    D    
Sbjct: 255 -------EKLSHYSKRTVDIEYRFRFGGSEFAELEG------------IANRTDFDLATH 295

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK----------- 543
           +     +L      ++     E+  P +I     G     +  ++E +            
Sbjct: 296 SKHSGVDLS-----YFDQGKGERWMPYVIE-PAAGLTRAVLAFLLEAYDEDEAPNTKGGV 349

Query: 544 -----GNLPLWLSPIQAIVTTIT--SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                      L+P++  V  ++   +    A+++A  L+     +E D     I  + R
Sbjct: 350 DKRTVMRFDPRLAPVKVAVLPLSRNEALSPKAKQLATDLRKR-WVVEFDDSQA-IGRRYR 407

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLP 647
                  P  +        + ++ +R   + T ++VSL      L  E LP
Sbjct: 408 RQDEIGTPFCVTVDFDTLDDNAVTVRNRDTMTQERVSLDQVERYLI-ERLP 457


>gi|218289124|ref|ZP_03493360.1| glycyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1]
 gi|218240707|gb|EED07886.1| glycyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1]
          Length = 464

 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 54/342 (15%), Positives = 108/342 (31%), Gaps = 47/342 (13%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            NM        T        L+P    G    F +  ++  ++LP  + +FG  +RNE +
Sbjct: 149 FNMMFRTFQGVTEDAANEVYLRPETAQGIFVNFKNVQRTMRKKLPFGIGQFGKSFRNEIT 208

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              + + R R F Q +   FC   +     +      +      G +   ++     +++
Sbjct: 209 PG-NFIFRTREFEQMELEFFCAPGEDEKWFVYWRQTCMDWLLSLGIKPDNLRFRDHAKEQ 267

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           +   + +  A   ++          +     G LLG       + +Y LK       +  
Sbjct: 268 L---SHYSKATTDIE---------YRFPFGWGELLGVAN----RTDYDLKAHQEHSGENM 311

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK----------- 543
            +Q +   P                P  I     G+   F+ +  + +            
Sbjct: 312 MVQEEGQEPF--------------IPYCIE-PSIGADRLFLAVFADAYDEEEVSEGDTRV 356

Query: 544 -GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
              L   L+P Q  V  ++    E A  +   L  H  S + D    +I  + R      
Sbjct: 357 VLRLHPKLAPYQVAVLPLSKKLNEPAHRLYLDLIKH-YSADYDETG-SIGKRYRRQDEIG 414

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            P  +    +  S+  + IR   S    ++ +      L ++
Sbjct: 415 TPFCVTYDFESESDGQVTIRMRDSMDQVRIPIEGVRTWLDEQ 456


>gi|42527166|ref|NP_972264.1| alanyl-tRNA synthetase [Treponema denticola ATCC 35405]
 gi|48428513|sp|P61708|SYA_TREDE RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|41817590|gb|AAS12175.1| alanyl-tRNA synthetase [Treponema denticola ATCC 35405]
          Length = 600

 Score = 76.4 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/139 (21%), Positives = 62/139 (44%), Gaps = 10/139 (7%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFSSDELAQIEK 124
           D        H+  H++ +A++ +  +     G  I  +   +DF   +P +  E  ++E+
Sbjct: 454 DHSEQTTAYHTATHLLHKALRMVLGDHVQQKGSNITAERLRFDFSHPEPMTEAEKKEVER 513

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLC 183
            + E I  D P   + +  E+A+++        K E        + V +Y+ G++  ++C
Sbjct: 514 LVNEAIKADLPVTMEVMPLEEAKKIGAMALFGEKYE--------DVVKVYKIGDFSTEVC 565

Query: 184 RGPHVRSTGQVKKFFKLMK 202
            GPHV  TG + +F    +
Sbjct: 566 GGPHVERTGSLGRFCIKKE 584


>gi|147985|gb|AAA24674.1| threonine-tRNA ligase (EC 6.1.1.3) [Escherichia coli]
          Length = 47

 Score = 76.4 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 3/49 (6%)

Query: 1  MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCD 49
          MP    +T PDGS +++    +  DVA  I   LAK  +A  +NG++ D
Sbjct: 1  MPV---ITLPDGSQRHYDHAVSPMDVALDIGPGLAKACIAGRVNGELVD 46


>gi|288801299|ref|ZP_06406753.1| glycine--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039]
 gi|288331682|gb|EFC70166.1| glycine--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039]
          Length = 513

 Score = 76.4 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 53/343 (15%), Positives = 110/343 (32%), Gaps = 50/343 (14%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+                 L+P    G    + +  K+   +LP  +A+ G  +RNE  
Sbjct: 194 FNLMFSTEMGSVSDAANKIYLRPETAQGIFVNYLNVQKTGRMKLPFGIAQIGKAFRNEIV 253

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
            +   + R+R F Q +   F +         K   L +  ++  GF     +     +  
Sbjct: 254 -ARQFIFRMREFEQMEMQYFVSPGTELEHFNKWKELRMKWHQALGFGAENYRFHDHEKLA 312

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
             ++A  D                 + ++  G    EG      F+              
Sbjct: 313 HYANAATDV----------------EFKMPFGFKEVEGVHSRTNFD-------------- 342

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK----------- 543
            +        +   ++    +E   P +I  ++ G    F+ IM   +            
Sbjct: 343 -LSQHEKFSGKSIKYFDPQTNESYVPYVIETSI-GVDRMFLSIMCHAYTEEALENGETRV 400

Query: 544 -GNLPLWLSPIQAIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              LP  L+P++  V  +       E A+EI + LK  H +   + ++ +I  + R H  
Sbjct: 401 VLKLPAALAPVKLCVMPLVKKDGLPEKAREIVDSLK-FHFNCHYEEKD-SIGKRYRRHDA 458

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              P  +        +  + +R   +   ++V + +   I+  
Sbjct: 459 IGTPYCVTVDHDTLKDNKVTLRFRDTMEQERVDISELRNIIED 501


>gi|298206935|ref|YP_003715114.1| glycyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
 gi|83849569|gb|EAP87437.1| glycyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
          Length = 511

 Score = 76.4 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 62/354 (17%), Positives = 115/354 (32%), Gaps = 55/354 (15%)

Query: 308 SGHWDSYRA-NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEF 365
           S +W   R  N+          +      L+P    G    F +  KS   ++P  +A+ 
Sbjct: 186 SKNWTDVRQFNLMFGTKLGADAETATDLYLRPETAQGIFVNFLNVQKSGRMKIPFGIAQT 245

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKI 423
           G  +RNE   +   + R+R F Q +   F     E  + E  K   L   +    G E  
Sbjct: 246 GKAFRNEIV-ARQFIFRMREFEQMEMQFFVRPGEELKWYEHWKETRLNWHLSLGLGKENY 304

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
                 +      + A  +         L+ I + +                    ++ L
Sbjct: 305 RFHDHEKLAHYANAAADIEFDFPFGFKELEGIHSRT--------------------DFDL 344

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM----I 539
           K     +     +Q           F+     E   P ++  ++ G    F+ ++    +
Sbjct: 345 K--AHEEHSGKKLQ-----------FFDPELGENYVPYVVETSI-GLDRMFLAVLSKSLV 390

Query: 540 ENFKGN--------LPLWLSPIQAIV--TTITSSAVEYAQEIANLLKSHHLSIETDFRNE 589
           E   GN        LP  L+P +  V          E A++I   LK    ++  D ++ 
Sbjct: 391 EEDLGNGNSRTVLKLPSILAPTKVAVFPLVKKDGLPELAEQIVEDLK-WDFNVLYDEKDA 449

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +  + R       P  I        ++++ IR   S    +V++ D   I+ K
Sbjct: 450 -VGKRYRRQDAAGTPFCITVDHDSLEDQTVTIRHRDSMEQSRVNISDLKSIIGK 502


>gi|292655989|ref|YP_003535886.1| histidyl-tRNA synthetase [Haloferax volcanii DS2]
 gi|291370647|gb|ADE02874.1| histidyl-tRNA synthetase [Haloferax volcanii DS2]
          Length = 431

 Score = 76.4 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 55/424 (12%), Positives = 117/424 (27%), Gaps = 70/424 (16%)

Query: 268 WHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADD 326
           ++       + ++  +     +  + EI TP +    ++                +    
Sbjct: 11  FYPGEMSARREVVDTVETAAARYGFREIGTPHLERTQMYVDKS------GEEIVEELYAF 64

Query: 327 TIKDLRTFALKPMNCPGHVAVF--NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVR 384
             K  R  AL P   P    +        S    P++       +R E         R R
Sbjct: 65  EDKGGREVALTPELTPTVARMVVAKQQALSK---PIKWVSTRPFWRYEQVQQ----GRFR 117

Query: 385 GFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG-------- 436
            F Q +A +F + E   +   +I         D G      +        +G        
Sbjct: 118 EFYQTNADIFGSSEPEADA--EILAFCADALTDLGLTADDFEFRVSHRDILGGLLRSFDV 175

Query: 437 ------------SDALWDDAE--NIMKGVLDTIKNSSQ--DRINTGVLLGEGAFYGPKFE 480
                            + AE   ++     +   + +  D I  G L    AF G   E
Sbjct: 176 DVDVADAVRAVDKSEKVERAEYLGLLSDAGLSYDQADEFADLIERGDLDEIAAFGGDDVE 235

Query: 481 YILKD-----------AIGRDWQCG---TIQVDFNLPSRFNAFYVNSH-------SEKCH 519
             +++             G   +        +D+     F  F              +  
Sbjct: 236 AAVENLRNVLAAADDFGAGEFCEVSLSTARGLDYYTGVVFECFDSTGDVSRATFGGGRYD 295

Query: 520 PVMIHRAVFGSIERFIGI------MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIAN 573
            ++       +    +GI      ++    G  P         + T+  +    A +IA 
Sbjct: 296 DLIESFGGQSTPAVGVGIGGATLQLLCQRAGVWPDEELATDYYLLTVGDT-RGVASDIAR 354

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            L++    +E D  + +   ++          ++I G+++     + ++   S     V 
Sbjct: 355 DLRAAGNVVEVDVSDRSFGAQMSYADSVNADTVVIVGERDLENGEVTVKDMASGDQTTVP 414

Query: 634 LLDA 637
           + D 
Sbjct: 415 VDDF 418


>gi|257077256|ref|ZP_05571617.1| glycyl-tRNA synthetase [Ferroplasma acidarmanus fer1]
          Length = 474

 Score = 76.4 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 61/466 (13%), Positives = 137/466 (29%), Gaps = 81/466 (17%)

Query: 248 KLAREMDLFHIAEDGSGVIF----WHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQ 302
           +LA+    F  +    G       +   G  +   +I   +    +     +++P +  +
Sbjct: 7   ELAKRRGFFWPSFSIYGGFAGFYDYGPLGVLLKDNIIRTWKESYMEDGAIFLDSPNITPE 66

Query: 303 HLWQQSGHWDSY------------------------------------------------ 314
            +++ SGH   +                                                
Sbjct: 67  PVFRASGHLARFSDLAAECEKCKSKFKFESVLAFNKQDIIPANLEEAKEMASDTYLKCPV 126

Query: 315 -RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNE 372
             + +  +   +   K    + L+P    G    F      +  +LP+ + + G  +RNE
Sbjct: 127 CGSRITNIYDFNLMYKVSGDYYLRPETAQGIFVNFKLLFNYNRGKLPMIVGQAGKGFRNE 186

Query: 373 PSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
            S     L+R+R F Q +  VF   E +  + L  ++      K    E++ + +    E
Sbjct: 187 ISPR-QSLIRLREFNQCEIEVFLDPENLEFKSL--YDYKKIKIKPNTGEELDITVKEAFE 243

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIG---- 488
           + + S   +       + +L+ I   S           E A Y         DA G    
Sbjct: 244 RGLISSQAFAYFVLKTQNILENIGIESSKLRFRQHDPDERAHYA----SDSWDAEGLIDN 299

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKC--------HPVMIHRAVFGSIERFIGIMIE 540
             ++   I    +     +                   + +     +   +   +   +E
Sbjct: 300 EWFEIVGIANRTDFDLNNHQSSSGETMTTKIEEREFIPYVIEPSYGIDRILLTLMAQSLE 359

Query: 541 NFKGN----LPLWLSPIQAIVTTITSSAV--EYAQEIANLLKSHHLSIETDFRNETINYK 594
              G     +P  ++P    V  +       E A+ I   +K     I  D    TI  +
Sbjct: 360 TRDGKNVLKIPYPVAPYHFAVFPLMKKENLKEKAEYIYENMKKQDKYIVYDEAG-TIGKR 418

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
                    P  I    +   + ++ +R   +   +++ + + + +
Sbjct: 419 YARQDEIGTPYCITVDYQTLEDNTVTVRSRDTAEQKRIKIEELLDL 464


>gi|119953163|ref|YP_945372.1| glycyl-tRNA synthetase [Borrelia turicatae 91E135]
 gi|119861934|gb|AAX17702.1| glycyl-tRNA synthetase [Borrelia turicatae 91E135]
          Length = 448

 Score = 76.4 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 62/441 (14%), Positives = 124/441 (28%), Gaps = 88/441 (19%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKDDYEEIN---TPQVLDQHLWQQSGHWDSY----- 314
           SGV  +   G ++ + +       +   +E +    +  ++   +W+ SGH DS+     
Sbjct: 31  SGVWDYGPLGIELKKNIQKEWWNTMVYLHENVVGLDSSILMRPEVWEASGHVDSFLDLLV 90

Query: 315 ---------------------------------RANMFAVKCADDTIKDLRTFALKPMNC 341
                                              N+                 L+P   
Sbjct: 91  DCKNCKNRFRIDSIDLSNGCSSCNSIGTFTAPRSFNLMFKTNIGAVEDSSNEIYLRPETA 150

Query: 342 PGHVAVFNHGLKSYR-ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
            G    F + L S R ++P  +A+ G  +RNE   + + + R   F Q +   F    QM
Sbjct: 151 QGIFVNFRNVLDSTRLKVPFGIAQVGKAFRNEIV-AKNFIFRTCEFEQMEMQFFVHPNQM 209

Query: 401 -FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSS 459
                      +    +  G     ++           D L   A    K  +D      
Sbjct: 210 SDWYYYWQQKRMNFFIETLGIRSDNLRFKEHKG-----DELAHYA----KAAVDI----- 255

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
           + +   G    EG      ++              +    F    +   ++  +  +K  
Sbjct: 256 EYKFPFGFQEIEGIHNRGNYDL-------------SQHAKFCGKPKLFEYHDLTSGDKYI 302

Query: 520 PVMIHRAVFGSIERFIGIMIENFK------------GNLPLWLSPIQAIVTTI--TSSAV 565
           P +I     G     +  + + +               L   L+P +  +  +       
Sbjct: 303 PYVIE-TSLGLTRSVLMTLCDAYAHEELEGEGKRIVLRLHPKLAPYKVAILPLVKKDGLP 361

Query: 566 EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
           E A+++             D  N TI  + R       P  +         R++ +R   
Sbjct: 362 ELARKVFMQFSDDFYMFYDD--NGTIGKRYRRQDEIGTPYCVTVDYDTIENRTVTLRDRD 419

Query: 626 STTTQKVSLLDAIPILTKESL 646
           S    ++ + D    +  E L
Sbjct: 420 SMAQIRIPIDDLYSYIRTEIL 440


>gi|125623578|ref|YP_001032061.1| seryl-tRNA synthetase [Lactococcus lactis subsp. cremoris MG1363]
 gi|166222737|sp|A2RJ76|SYS_LACLM RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|124492386|emb|CAL97327.1| SerS protein [Lactococcus lactis subsp. cremoris MG1363]
 gi|300070342|gb|ADJ59742.1| seryl-tRNA synthetase [Lactococcus lactis subsp. cremoris NZ9000]
          Length = 423

 Score = 76.4 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 45/222 (20%), Positives = 89/222 (40%), Gaps = 19/222 (8%)

Query: 242 EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINT 296
           E + H  L  ++ +          GS  +F+   G ++ + L ++M     K+ Y E+ T
Sbjct: 136 EPKAHWDLGEDLGILDWERGGKVTGSRFLFYKGAGARLERALYNFMLDEHGKEGYTEMIT 195

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +++Q     +G +  ++ + F        +KD R F L P         +   +    
Sbjct: 196 PYMVNQESMFGTGQYPKFKEDTF-------ELKDDRGFVLIPTAEVPLTNYYRGEILDGS 248

Query: 357 ELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           ELP++       +R+E   +     GL+R+  F + +   F   +Q ++E  K+     +
Sbjct: 249 ELPIKFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPDQSYDELEKMTANAEN 308

Query: 414 IYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
           I +  G    +V LST              +W  A+N  + +
Sbjct: 309 ILQKLGLAYRVVALSTGDMGFSAAKTYDLEVWIPAQNTYREI 350


>gi|184201296|ref|YP_001855503.1| glycyl-tRNA synthetase [Kocuria rhizophila DC2201]
 gi|183581526|dbj|BAG29997.1| glycyl-tRNA synthetase [Kocuria rhizophila DC2201]
          Length = 460

 Score = 76.4 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 51/335 (15%), Positives = 105/335 (31%), Gaps = 49/335 (14%)

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
             +     L+P    G    F + + +  ++ P  + + G  +RNE +   + + R R F
Sbjct: 152 DNEEGKHFLRPETAQGIFVNFLNVVTAARKKPPFGIGQIGKAFRNEITPG-NFIFRTREF 210

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
            Q +   F   ++      +        + D G     ++   R +      A + D   
Sbjct: 211 EQMEIEYFIHPDEAKKYFDEWVEACWDWFVDLGVNPDNMR---RYDVPADDRAHYSDGT- 266

Query: 447 IMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF 506
                +D            G L+G       + ++ L +    +     +Q         
Sbjct: 267 -----IDIEYRFGFQGSEWGELMGVAN----RTDFDLSNHT--EASGTKMQYFDQ----- 310

Query: 507 NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNL------------PLWL 550
                 +  E+  P +I    FG     +  ++    E+   N                L
Sbjct: 311 ------ASGERYTPYVIE-PSFGLTRSMMAFLVDAYVEDEAPNTKGGVDTRTVLRLDPRL 363

Query: 551 SPIQAIVTTIT--SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIII 608
           +P++A V  ++        AQ +   L+    +I+ D     I  + R       P  I 
Sbjct: 364 APVKAAVLPLSKKEDLRPTAQHLDAELRRR-WNIDYDDAGA-IGRRYRRQDEIGTPFCIT 421

Query: 609 CGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
                  ++++ IR     T ++V L      L +
Sbjct: 422 VDFDTLEDQAVTIRSRDEMTQERVGLDRVQQYLAE 456


>gi|308174457|ref|YP_003921162.1| histidyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|307607321|emb|CBI43692.1| histidyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|328554376|gb|AEB24868.1| histidyl-tRNA synthetase [Bacillus amyloliquefaciens TA208]
 gi|328912781|gb|AEB64377.1| histidyl-tRNA synthetase [Bacillus amyloliquefaciens LL3]
          Length = 424

 Score = 76.4 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 76/414 (18%), Positives = 140/414 (33%), Gaps = 57/414 (13%)

Query: 276 FQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           +Q +   MR   +   Y+EI TP        +          ++   +      +  R+ 
Sbjct: 20  WQFVEQIMRETCRTYQYKEIRTPIF---EHTELFARGVGESTDIVQKEMYTFEDRKGRSL 76

Query: 335 ALKPMNCPGHVAVFNHGLKSYREL-PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
            L+P      V  FN        + P +L   G ++R E   +     R R F Q     
Sbjct: 77  TLRPEGTAAAVRAFNENKLFANPVQPTKLYYVGPMFRYERPQT----GRFRQFYQFGIEA 132

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFG----------------FEKIMVKLSTRPEKRVG- 436
             +K+   +   ++  L +SIY+  G                 +     L    E R+G 
Sbjct: 133 IGSKDPAVDA--EVIALAMSIYRKAGLKNVKLVLNSLGDQDSRKAYREALVKHFEPRIGE 190

Query: 437 --SDALWDDAENIMKGVLDTIKNSSQDRINTG------VLLGEGAFY----------GPK 478
             SD       N ++ +LD  K+   + + T       +     A++          G  
Sbjct: 191 FCSDCQSRLHTNPLR-ILDCKKDREHELMKTAPSILDYLNEESAAYFQKVQQYITALGIP 249

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK--------CHPVMIHRAVFGS 530
           FE       G D+   T     +    F A    +   +          P         S
Sbjct: 250 FEIDPNLVRGLDYYNHTAFEIMSNAEGFGAITTLAGGGRYDGLVEQIGGPEAPGIGFAMS 309

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
           IER +   I+  K  LP+    I   + T+   A +Y+  +   L+   +S E D+ N+ 
Sbjct: 310 IERLLAA-IDAEKTELPVNQG-IDCYIVTLGEKAKDYSVSLVYKLREAGISSEIDYENKK 367

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  + +         I I G+ E ++  I ++   +   ++V L + I +L  +
Sbjct: 368 MKGQFKTADRLGARFIAILGEDELAQNKINVKDAETGEQREVVLDELIQVLKAD 421


>gi|239917142|ref|YP_002956700.1| glycyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
 gi|281414391|ref|ZP_06246133.1| glycyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
 gi|239838349|gb|ACS30146.1| glycyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
          Length = 460

 Score = 76.4 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 59/390 (15%), Positives = 123/390 (31%), Gaps = 59/390 (15%)

Query: 277 QTLISYMRRKIK--DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
             L ++  +K +  +   EI  P    Q  W +   +                  +    
Sbjct: 103 HLLEAFEAKKGRPAEGMAEIVCPDCGTQGAWTEPQLFSG-----LVKTYLGPVDNEEGLH 157

Query: 335 ALKPMNCPGHVAVFNHGL-KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
            L+P    G    F + L  + ++ P  + + G  +RNE +   + + R R F Q +   
Sbjct: 158 YLRPETAQGIFVNFLNVLGAARKKPPFGIGQIGKAFRNEITPG-NFIFRTREFEQMEIEY 216

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
           F    +      +        + D G +   ++   + +      A + DA   ++    
Sbjct: 217 FVPPAEAGQHFDRWVEDCWDWFIDLGIDPAHLR---KFDVPADERAHYSDATIDLE---Y 270

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGR--DWQCGTIQVDFNLPSRFNAFYV 511
               +  D     + +     Y           +GR  +     +Q              
Sbjct: 271 DFGFTGGDGWGELMGIANRTDY----------DLGRHTEHSGTKMQYFDQ---------- 310

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFK----------------GNLPLWLSPIQA 555
            +++E   P +I    FG     +  +++ +                   L   L+P++A
Sbjct: 311 -ANNEHYTPYVIE-PSFGLTRAMMAFLVDAYAEDEAPNAKGGVDVRTVLKLDPRLAPVKA 368

Query: 556 IVTTITSSAV--EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
            V  ++  A      Q +A  L+    +IETD     I  + R       P  I      
Sbjct: 369 AVLPLSRKAELQPATQSLAAELRGL-WNIETDDSGA-IGRRYRRQDEIGTPFCITVDFDT 426

Query: 614 ASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             ++++ IR   +   ++V+L      L +
Sbjct: 427 LEDQAVTIRERDTMAQERVALSQVKSYLLE 456


>gi|139473237|ref|YP_001127952.1| seryl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
 gi|166223299|sp|A2RCY1|SYS_STRPG RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|134271483|emb|CAM29704.1| seryl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
          Length = 425

 Score = 76.4 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 43/243 (17%), Positives = 93/243 (38%), Gaps = 21/243 (8%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIF 276
           G       E+ ++    +   E + H  L  ++D+          G+  +F+   G ++ 
Sbjct: 115 GADEEDNVEIRRWGTPRDFDFEVKAHWDLGEDLDILDWERGAKVTGARFLFYKNLGARLE 174

Query: 277 QTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFA 335
           + L ++M    IK+ Y+EI TP +++      +G +  ++ + F +   +        F 
Sbjct: 175 RALYNFMLDEHIKEGYQEIITPYMVNHDSMFGTGQYPKFKEDTFELADTN--------FV 226

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAH 392
           L P         +   +   +ELP+        +R+E   +     GL+R+  F + +  
Sbjct: 227 LIPTAEVPLTNYYRGEILDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMV 286

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIM 448
            F   E+ + E  K+     +I +  G    ++ L T              +W  A+N  
Sbjct: 287 KFAKSEESYQELEKMTANAENILQKLGLPYRVISLCTGDMGFSAAKTYDLEVWIPAQNTY 346

Query: 449 KGV 451
           + +
Sbjct: 347 REI 349


>gi|284990200|ref|YP_003408754.1| glycyl-tRNA synthetase [Geodermatophilus obscurus DSM 43160]
 gi|284063445|gb|ADB74383.1| glycyl-tRNA synthetase [Geodermatophilus obscurus DSM 43160]
          Length = 467

 Score = 76.4 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 51/356 (14%), Positives = 108/356 (30%), Gaps = 50/356 (14%)

Query: 307 QSGHWDS-YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH-GLKSYRELPVRLAE 364
             G W      NM           +     L+P    G    F +    + ++ P  + +
Sbjct: 136 TKGAWTEPRDFNMMLKTHLGPVEDESGLHYLRPETAQGIFVNFANVMGAARKKPPFGIGQ 195

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
            G  +RNE +   + + R R F Q +   F              +     Y D G +   
Sbjct: 196 IGKSFRNEITPG-NFIFRTREFEQMEMEFFVEPGTDEQWHQYWIDERTRWYTDLGIDPAN 254

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           ++    P+         +   +     +D            G L G       + ++ LK
Sbjct: 255 LRHYEHPK---------EKLSHYSTRTVDIEYRFGFQGSEWGELEGIAN----RTDFDLK 301

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
                +     +                + + +  P +I     G     +  +IE +  
Sbjct: 302 THS--EHSGADLTYFDQ-----------ASNTRWTPYVIE-PAAGLTRSLMAFLIEGYTE 347

Query: 545 N----------------LPLWLSPIQAIVTTITSSAV--EYAQEIANLLKSHHLSIETDF 586
           +                L   L+P++A V  ++ +A     A+++A  L+    +++ D 
Sbjct: 348 DEAPNAKGGVDTRTVLRLDPRLAPVKAAVLPLSRNADLSPKARDLAAQLRQS-WNVDFDD 406

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
               I  + R       P  +       ++ ++ +R   S + ++V L      L 
Sbjct: 407 AGA-IGRRYRRQDEIGTPFCLTVDFDTLTDDAVTVRERDSMSQERVGLDQVETYLK 461


>gi|170035421|ref|XP_001845568.1| bifunctional aminoacyl-tRNA synthetase [Culex quinquefasciatus]
 gi|167877384|gb|EDS40767.1| bifunctional aminoacyl-tRNA synthetase [Culex quinquefasciatus]
          Length = 1534

 Score = 76.0 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 52/123 (42%), Gaps = 4/123 (3%)

Query: 273 WKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKD 330
           + +++ + ++   +I     +E   P  + +   + +  H   +   +  V  + ++   
Sbjct: 672 FAVWKAIKAWFDAEITKMGVKECYFPIFVSRAALEREKDHIADFAPEVAWVTKSGESDL- 730

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
               A++P +       +   ++SYR+LP+RL ++ +V R E        +R R F   +
Sbjct: 731 AEPIAVRPTSETVMYPAYAKWIQSYRDLPIRLNQWNNVVRWEFKHP-QPFLRTREFLWQE 789

Query: 391 AHV 393
            H 
Sbjct: 790 GHT 792



 Score = 76.0 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 52/123 (42%), Gaps = 4/123 (3%)

Query: 273  WKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDTIKD 330
            + +++ + ++   +I     +E   P  + +   + +  H   +   +  V  + ++   
Sbjct: 1324 FAVWKAIKAWFDAEITKMGVKECYFPIFVSRAALEREKDHIADFAPEVAWVTKSGESDL- 1382

Query: 331  LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
                A++P +       +   ++SYR+LP+RL ++ +V R E        +R R F   +
Sbjct: 1383 AEPIAVRPTSETVMYPAYAKWIQSYRDLPIRLNQWNNVVRWEFKHP-QPFLRTREFLWQE 1441

Query: 391  AHV 393
             H 
Sbjct: 1442 GHT 1444


>gi|116512562|ref|YP_811469.1| seryl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11]
 gi|123025253|sp|Q02XG6|SYS_LACLS RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|116108216|gb|ABJ73356.1| seryl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11]
          Length = 423

 Score = 76.0 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 45/222 (20%), Positives = 89/222 (40%), Gaps = 19/222 (8%)

Query: 242 EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINT 296
           E + H  L  ++ +          GS  +F+   G ++ + L ++M     K+ Y E+ T
Sbjct: 136 EPKAHWDLGEDLGILDWERGGKVTGSRFLFYKGAGARLERALYNFMLDEHGKEGYTEMIT 195

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +++Q     +G +  ++ + F        +KD R F L P         +   +    
Sbjct: 196 PYMVNQESMFGTGQYPKFKEDTF-------ELKDDRGFVLIPTAEVPLTNYYRGEILDGS 248

Query: 357 ELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           ELP++       +R+E   +     GL+R+  F + +   F   +Q ++E  K+     +
Sbjct: 249 ELPIKFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPDQSYDELEKMTANAEN 308

Query: 414 IYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
           I +  G    +V LST              +W  A+N  + +
Sbjct: 309 ILQKLGLAYRVVALSTGDMGFSAAKTYDLEVWIPAQNTYREI 350


>gi|25028734|ref|NP_738788.1| glycyl-tRNA synthetase [Corynebacterium efficiens YS-314]
 gi|23494020|dbj|BAC18988.1| putative glycyl-tRNA synthetase [Corynebacterium efficiens YS-314]
          Length = 473

 Score = 76.0 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 49/329 (14%), Positives = 108/329 (32%), Gaps = 31/329 (9%)

Query: 328 IKDLRTFALKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
             +     L+P    G    F +    S  + P  +A  G  +RNE +   + + R R F
Sbjct: 164 DDEEGLHYLRPETAQGIFVNFKNVMNSSRMKPPFGIANIGKSFRNEITPG-NFIFRTREF 222

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
            Q +   F    +         +     Y D G     ++L   P++++   + +     
Sbjct: 223 EQMEMEFFVKPGEDEEWHQHWIDARHQWYIDLGVNPDNLRLYEHPQEKL---SHYSKRTV 279

Query: 447 IMKGVLDTIKNSSQD------RINTGVLLGEGAFYGPKFEYILKD-AIGRDWQCGTIQVD 499
            ++   +   +   +      R +  +        G   +    D   G  W    I+  
Sbjct: 280 DIEYAFNFANSKWGELEGIANRTDYDL---RVHSEGSGEDLSYFDQETGERWIPYVIEPA 336

Query: 500 FNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTT 559
             L      F ++++ E   P     +  G  +R +          L   L+P++  V  
Sbjct: 337 AGLGRAMMVFLMDAYHEDEAP----NSKGGVDKRVV--------LKLDRRLAPVKVAVLP 384

Query: 560 ITSSAV--EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASER 617
           ++        A+++A  L+    ++E D     I  + R       P  +        + 
Sbjct: 385 LSKKPELSGPAEKLAAELRQF-WNVEYDTSGA-IGRRYRRQDEIGTPFCVTVDFDTLEDN 442

Query: 618 SIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           ++ +R   +    +V L +    L ++ +
Sbjct: 443 AVTVRERDTMEQIRVPLDELQGYLAQQLI 471


>gi|282861791|ref|ZP_06270855.1| glycyl-tRNA synthetase [Streptomyces sp. ACTE]
 gi|282563607|gb|EFB69145.1| glycyl-tRNA synthetase [Streptomyces sp. ACTE]
          Length = 460

 Score = 76.0 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 51/326 (15%), Positives = 100/326 (30%), Gaps = 23/326 (7%)

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
                T        L+P    G    F      S ++ P  +A+ G  +RNE +   + +
Sbjct: 145 THLGPTQDSGSVAYLRPETAQGIFTNFGQVQQTSRKKPPFGIAQMGKSFRNEITPG-NFI 203

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            R R F Q +   F    +             + Y   G  +  ++    P+        
Sbjct: 204 FRTREFEQMEMEFFVKPGEDEEWQEYWMQQRWNWYTGLGMREENMRWFEHPQ-------- 255

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDF 500
            +   +  K   D            G L G       + +Y L  A  +         D 
Sbjct: 256 -EKLSHYSKRTADIEYRFRFGGSEWGELEGVAN----RTDYDL-TAHSKASGTDLSYFDQ 309

Query: 501 NLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI---GIMIENFKGNLPLWLSPIQAIV 557
               R+  + +   +     ++       S +      G+M +     L   L+P++  V
Sbjct: 310 EKSERYTPYVIEPAAGVGRAMLAFLLDAYSEDEAPNAKGVMEKRAVMRLDPRLAPVKVAV 369

Query: 558 TTIT--SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEAS 615
             ++        A+ +A  L+  + +IE D     I  + R       P  +        
Sbjct: 370 LPLSRNPQLSPKAKGLAADLR-QNWNIEFDDAGA-IGRRYRRQDEIGTPFCVTVDFDTLD 427

Query: 616 ERSIGIRRFGSTTTQKVSLLDAIPIL 641
           + ++ +R   +   ++VSL      L
Sbjct: 428 DNAVTVRERDTMKQERVSLDQIQAYL 453


>gi|315504260|ref|YP_004083147.1| glycyl-tRNA synthetase [Micromonospora sp. L5]
 gi|315410879|gb|ADU08996.1| glycyl-tRNA synthetase [Micromonospora sp. L5]
          Length = 459

 Score = 76.0 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 50/351 (14%), Positives = 104/351 (29%), Gaps = 50/351 (14%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPS 374
            N            D     L+P    G    + +    + ++ P  +A+ G  +RNE +
Sbjct: 138 FNGLMKTYLGPVESDEGMHYLRPETAQGIFVNYKNVETVARKKPPFGIAQTGKSFRNEIT 197

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              + + R R F Q +   F              +   + Y D G  +  ++    P+  
Sbjct: 198 PG-NFIFRTREFEQMEMEFFVEPGTDEQWHEYWLSERWNWYLDLGLSEENLRFYEHPK-- 254

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
                  +   +  K  +D              L G            + +    D    
Sbjct: 255 -------EKLSHYSKRTVDIEYRFRFGGSEFAELEG------------IANRTDFDLSTH 295

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK----------- 543
           +     +L      ++     E+  P +I     G     +  ++E +            
Sbjct: 296 SKHSGVDLS-----YFDQGKGERWMPYVIE-PAAGLTRAVLAFLLEAYDEDEAPNTKGGV 349

Query: 544 -----GNLPLWLSPIQAIVTTIT--SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                      L+P++  V  ++   +    A+++A  L+     +E D     I  + R
Sbjct: 350 DKRTVMRFDPRLAPVKVAVLPLSRNEALSPKAKQLATDLRKR-WVVEFDDSQA-IGRRYR 407

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLP 647
                  P  +        + ++ +R   +   ++VSL      L  E LP
Sbjct: 408 RQDEIGTPFCVTVDFDTLDDNAVTVRNRDTMAQERVSLDQVERYLI-ERLP 457


>gi|126652268|ref|ZP_01724447.1| glycyl-tRNA synthetase [Bacillus sp. B14905]
 gi|126591000|gb|EAZ85112.1| glycyl-tRNA synthetase [Bacillus sp. B14905]
          Length = 470

 Score = 76.0 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 47/330 (14%), Positives = 104/330 (31%), Gaps = 24/330 (7%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    F +  +S  +  P  +A+ G  +RNE +
Sbjct: 159 FNLMFKTFQGVTESSTNEIFLRPETAQGIFVNFKNVQRSMRKRTPFGIAQVGKSFRNEIT 218

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
              +   R R F Q +   FC   E +            +   + G ++  ++L    + 
Sbjct: 219 PG-NFTFRTREFEQMELEFFCKPGEDLEWHSY-WKEFCKNWLLNLGMKEDSMRLRDHEDD 276

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
            +   + + +A   +       K         G+   +   Y  K      +  G D+  
Sbjct: 277 EL---SHYSNATTDI-----EFKFPFGWGELWGI--ADRTDYDLK---QHMEHSGEDFT- 322

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI 553
               +D     R+  + +         V +        E  +    +         ++P 
Sbjct: 323 ---YIDPVSNERYIPYCIEPSLGADR-VTLAFLCDAYDEEELEGDDKRTVLRFHPAIAPF 378

Query: 554 QAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
           +A V  ++    + A ++   L+     ++ D   ++I  + R       P  I      
Sbjct: 379 KAAVLPLSKKLSDEATDVWAELRKAFP-VDFDES-QSIGKRYRRQDEIGTPFCITYDFDS 436

Query: 614 ASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             +  + +R   S T  ++ + +    + K
Sbjct: 437 KEDGQVTVRHRDSMTQVRMPISEVKAYIEK 466


>gi|159039341|ref|YP_001538594.1| glycyl-tRNA synthetase [Salinispora arenicola CNS-205]
 gi|157918176|gb|ABV99603.1| glycyl-tRNA synthetase [Salinispora arenicola CNS-205]
          Length = 459

 Score = 76.0 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 50/351 (14%), Positives = 105/351 (29%), Gaps = 50/351 (14%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPS 374
            N            D     L+P    G    + +    + ++ P  +A+ G  +RNE +
Sbjct: 138 FNGLMKTYLGPVESDEGLHYLRPETAQGIFVNYKNVETVARKKPPFGIAQTGKSFRNEIT 197

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              + + R R F Q +   F                  + Y D G  +  ++    P+  
Sbjct: 198 PG-NFIFRTREFEQMEMEFFVEPGTDEGWHEYWLTERWNWYLDLGLTERNLRRYEHPQ-- 254

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
                  +   +  K  +D              L G            + +    D    
Sbjct: 255 -------EKLSHYSKRTVDIEYRFQFGGTEFAELEG------------IANRTDFDLSTH 295

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK----------- 543
           +     +L      ++  +  E+  P +I     G     +  ++E +            
Sbjct: 296 SKHSGVDLS-----YFDQAKGERWIPYVIE-PAAGLTRAVLAFLLEAYDEDEAPNTKGGV 349

Query: 544 -----GNLPLWLSPIQAIVTTIT--SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                      L+P++A V  ++   +    A+++A  L+     +E D     I  + R
Sbjct: 350 DKRTVMRFDPRLAPVKAAVLPLSRNEALSPKARQLAADLRQR-WVVEFDDSQA-IGRRYR 407

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLP 647
                  P  +        + ++ +R   +   +++SL      L  E LP
Sbjct: 408 RQDEIGTPFCVTVDFDTLDDNAVTVRNRDTMAQERISLDQVERYLI-ERLP 457


>gi|45658196|ref|YP_002282.1| glycyl-tRNA synthetase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
 gi|59798554|sp|Q72PW7|SYG_LEPIC RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|45601438|gb|AAS70919.1| glycyl-tRNA synthetase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
          Length = 464

 Score = 76.0 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 51/386 (13%), Positives = 120/386 (31%), Gaps = 65/386 (16%)

Query: 281 SYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADD----------TIKD 330
            ++  +  + +    T + ++Q + + +    +        +  D           + +D
Sbjct: 107 KFLEDQKGEGFATGLTLEKMNQVIKESNFACPNCGQRGTFTEARDFNLMFKTSHGASAED 166

Query: 331 LRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
                L+P    G    F + + +  R++P  +A+ G  +RNE   +   + R R F Q 
Sbjct: 167 SLDIYLRPETAQGIFLNFKNVVSTTRRKIPFGIAQIGKSFRNEI-MARQFVFRTREFEQM 225

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIY-KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIM 448
           +   FC             N  ++   +  G +K  +++    ++ +             
Sbjct: 226 EMEFFCEPGTQKEWFSHWVNYCMNWLTEQVGIKKENLRVREHEKEEL------------- 272

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF-- 506
                +  +     I      G G  +G                      D N   +F  
Sbjct: 273 -----SFYSEGTSDIEFKYNFGWGELWG---------------IASRTDYDLNQHQKFSG 312

Query: 507 -NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK------------GNLPLWLSPI 553
            +  Y +    K +   +     G    F+ ++ + ++                  ++P+
Sbjct: 313 EDLKYQDQVQNKKYVPFVVEPALGVNRLFLAVVTDAYEEEKLPDGETRTVLRFSPKIAPV 372

Query: 554 QAIV--TTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
           +A V          E ++EI   L     +IE D     I  + R       P  I    
Sbjct: 373 KAAVFPLMKKDGLPEKSREIFADLSKLG-NIEYDDGGA-IGKRYRRQDEIGTPFCITVDY 430

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDA 637
               + ++ +R   S + +++++   
Sbjct: 431 DTLKDNTVTVRERDSMSQERIAVNQL 456


>gi|123968914|ref|YP_001009772.1| seryl-tRNA synthetase [Prochlorococcus marinus str. AS9601]
 gi|166222764|sp|A2BSA4|SYS_PROMS RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|123199024|gb|ABM70665.1| Seryl-tRNA synthetase [Prochlorococcus marinus str. AS9601]
          Length = 425

 Score = 76.0 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 40/242 (16%), Positives = 82/242 (33%), Gaps = 20/242 (8%)

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFH----IAEDGSGVIFWHRKGWKIFQ 277
           G   +   ++  +   L +   + H ++   +++F          S  I     G ++ +
Sbjct: 119 GKDESENLQIKTWGDPLIKENIKSHWEIGESLNIFDSIKSTKISKSRFITLIGNGARLER 178

Query: 278 TLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFAL 336
            LI++M     K+ Y E+  P +++      SG    +    F     D          L
Sbjct: 179 ALINFMLDMHTKNGYLELMPPALVNSESLTGSGQLPKFSNESFKCSNDD--------LWL 230

Query: 337 KPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHV 393
            P       A+  + L   + LP++   +   +R E         GL+R+  F + + + 
Sbjct: 231 SPTAEVPLTALHRNELIDPKHLPLKYVAYSPCFRREAGSYGRDTKGLIRLHQFNKVELYW 290

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP----EKRVGSDALWDDAENIMK 449
           FC   +      +I     SI K       +V + T        R     +W  +    +
Sbjct: 291 FCDPSKSLEAHKEITTDAESILKKLNLPYRLVDICTGDLGFSSSRTFDLEVWLPSSKCYR 350

Query: 450 GV 451
            +
Sbjct: 351 EI 352


>gi|15673694|ref|NP_267868.1| seryl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
 gi|281492294|ref|YP_003354274.1| seryl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
 gi|30173210|sp|Q9CEX2|SYS_LACLA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|12724729|gb|AAK05810.1|AE006401_11 seryl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
 gi|281375958|gb|ADA65449.1| Seryl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
 gi|326407178|gb|ADZ64249.1| seryl-tRNA synthetase [Lactococcus lactis subsp. lactis CV56]
          Length = 423

 Score = 76.0 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 45/222 (20%), Positives = 89/222 (40%), Gaps = 19/222 (8%)

Query: 242 EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINT 296
           E + H  L  ++ +          GS  +F+   G ++ + L ++M     K+ Y E+ T
Sbjct: 136 EPKAHWDLGEDLGILDWERGGKVTGSRFLFYKGAGARLERALYNFMLDEHGKEGYTEMIT 195

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +++Q     +G +  ++ + F        +KD R F L P         +   +    
Sbjct: 196 PYMVNQESMFGTGQYPKFKEDTF-------ELKDDRGFVLIPTAEVPLTNYYRGEILDGA 248

Query: 357 ELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           ELP++       +R+E   +     GL+R+  F + +   F   +Q ++E  K+     +
Sbjct: 249 ELPIKFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPDQSYDELEKMTANAEN 308

Query: 414 IYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
           I +  G    +V LST              +W  A+N  + +
Sbjct: 309 ILQKLGLAYRVVALSTGDMGFSAAKTYDLEVWIPAQNTYREI 350


>gi|332828261|gb|EGK00973.1| glycyl-tRNA synthetase [Dysgonomonas gadei ATCC BAA-286]
          Length = 511

 Score = 76.0 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 58/334 (17%), Positives = 110/334 (32%), Gaps = 32/334 (9%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    F +  K+   ++P  +A+ G  +RNE  
Sbjct: 193 FNLMFATEMGSTADGAMKVYLRPETAQGIFVNFLNVQKTGRMKIPFGIAQIGKAFRNEIV 252

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
            +   + R+R F Q +   F    +      K     +  +K  G+     +     +  
Sbjct: 253 -ARQFIFRMREFEQMEMQFFVRPGEELEWFAKWKETRMKWHKALGYGDHKYRFHDHDKLA 311

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK---FEYILKDAIGRDW 491
             ++A  D    +  G  +     S+   +   L     + G K   F+  L  +     
Sbjct: 312 HYANAATDIEFEMPFGFKEVEGIHSRTDFD---LSSHEQYSGKKLQYFDPELNKSYTPYV 368

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLS 551
              +I VD    S  +A Y     E     ++                      LP  L+
Sbjct: 369 IETSIGVDRMFLSTMSAAYCEEELEGGESRVV--------------------LKLPAALA 408

Query: 552 PIQAIVTTITSSAV--EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIIC 609
           PI+  V  +       E AQEI + LK      + D ++ +I  + R       P  +  
Sbjct: 409 PIKLAVLPLIKKDGLPEKAQEIIDNLK-FDFKCQYDEKD-SIGKRYRRQDAIGTPYCVTV 466

Query: 610 GDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             +   + ++ IR   +   ++V++     I+  
Sbjct: 467 DHQSLEDNTVTIRYRDTMEQERVAIDRLADIIAD 500


>gi|294812531|ref|ZP_06771174.1| Glycyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|326441016|ref|ZP_08215750.1| glycyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|294325130|gb|EFG06773.1| Glycyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
          Length = 461

 Score = 76.0 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 57/326 (17%), Positives = 112/326 (34%), Gaps = 23/326 (7%)

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
                T        L+P    G    F      S R+ P  +A+ G  +RNE +   + +
Sbjct: 146 THLGPTADSGSVAYLRPETAQGIFTNFGLVQNTSRRKPPFGIAQMGKSFRNEITPG-NFI 204

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            R R F Q +   F    +  +      +   + Y   G  +  ++    P++++ S   
Sbjct: 205 FRTREFEQMEMEFFVKPGEDEHWQQYWMDQRWNWYTGLGMREENMRWYEHPKEKL-SHYS 263

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY---GPKFEYILKDAIGRDWQCGTIQ 497
              A+   +      +    + +        GA     G    Y  ++A G  W    I+
Sbjct: 264 KRTADIEYRFQFGGNEWGELEGVANRTDYDLGAHSKASGQDLSYFDQEA-GERWTPYVIE 322

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIV 557
               +     AF +++++E   P               G+M +     L   L+P++  V
Sbjct: 323 PAAGVGRAMLAFMLDAYNEDEAPNAK------------GVMEKRTVMRLDPRLAPVKVAV 370

Query: 558 TTITSSA--VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEAS 615
             ++ +A     A+ +A  L+ H  +IE D     I  + R       P  +        
Sbjct: 371 LPLSRNAQLSPKAKGLAADLRQH-WNIEFDDAGA-IGRRYRRQDEIGTPFCVTVDFDTLD 428

Query: 616 ERSIGIRRFGSTTTQKVSLLDAIPIL 641
           + ++ +R   +   ++VSL      L
Sbjct: 429 DNAVTVRERDTMQQERVSLDQIQAYL 454


>gi|26553794|ref|NP_757728.1| glycyl-tRNA synthetase [Mycoplasma penetrans HF-2]
 gi|59798587|sp|Q8EW64|SYG_MYCPE RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|26453801|dbj|BAC44132.1| glycyl-tRNA synthetase [Mycoplasma penetrans HF-2]
          Length = 462

 Score = 76.0 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 55/346 (15%), Positives = 109/346 (31%), Gaps = 50/346 (14%)

Query: 307 QSGHWDSYRANMFAVKCADDTIKDLRTFAL-KPMNCPGHVAVFNHGLKSYRE-LPVRLAE 364
           +  +W   R        +   + D +     +P    G    F +  ++ R+ LP  + +
Sbjct: 137 KKSNWTEIRKFNLMFDTSIGVVDDKKDLVYLRPETAQGIFINFKNIQRTQRQKLPFGVGQ 196

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
            G  +RNE +   + + R R F Q +   FC K+            I +           
Sbjct: 197 IGKAFRNEITPG-NFIFRTREFEQMEIEYFCDKKDSPKVFDNFLESIKTFLFK------- 248

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA--FYGPKFEYI 482
                       +  + ++   I+    + + + S   ++       G    +G      
Sbjct: 249 ------------TLKIHENNIKIIDYPKEELAHYSSRTVDFLYNFPHGYSELWGL----- 291

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
              A   ++     Q   NL  +   +      EK  P +I     G       I+I+ +
Sbjct: 292 ---ADRGEFDLTAHQ---NLSKKSLEYLNEETKEKFVPSVIE-PSVGVERLLYAILIDAY 344

Query: 543 K------------GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
                          L   L+P +  V  +++   + A+EI N L   +  I T   + +
Sbjct: 345 DEEKIDEENNRVVLKLIPELAPYKFAVLPLSNKLNDKAEEIFNNLILSN--ICTYDSSGS 402

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
           I  + R       P  I        +  + IR   S    ++ + D
Sbjct: 403 IGKRYRRQDAIGTPYCITVDFDTLEDECVTIRDRDSMKQIRIKIKD 448


>gi|119383350|ref|YP_914406.1| alanyl-tRNA synthetase [Paracoccus denitrificans PD1222]
 gi|205830170|sp|A1AZL6|SYA_PARDP RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|119373117|gb|ABL68710.1| alanyl-tRNA synthetase [Paracoccus denitrificans PD1222]
          Length = 885

 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/150 (24%), Positives = 65/150 (43%), Gaps = 8/150 (5%)

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDE 118
           ++    D RS     HS  H++ EA++    E     G     D   +DF   +  + +E
Sbjct: 548 QLSVDHDRRSAIRANHSATHLLHEALRRALGEHVAQRGSLNAPDRLRFDFSHAKAMTPEE 607

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKAREL------FESKKEAYKVEILESIPAKENVT 172
           LAQ+E+++ + I ++SP   + ++ + AR L       E   +  +V  +  +P     T
Sbjct: 608 LAQVEREVNDFIRQNSPVETRIMTPDDARALGAQALFGEKYGDEVRVVSMGELPGSGKGT 667

Query: 173 LYRQGEWFDLCRGPHVRSTGQVKKFFKLMK 202
              Q    +LC G HV  TG +  F    +
Sbjct: 668 -GGQTYSLELCGGTHVARTGDIGMFALTSE 696


>gi|156742938|ref|YP_001433067.1| proline--tRNA ligase [Roseiflexus castenholzii DSM 13941]
 gi|156234266|gb|ABU59049.1| Proline--tRNA ligase [Roseiflexus castenholzii DSM 13941]
          Length = 564

 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 20/142 (14%), Positives = 59/142 (41%), Gaps = 6/142 (4%)

Query: 507 NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL---SPIQAIVTTIT-- 561
           +A +++       P+++           + I+ ++      +W    +P    +  +   
Sbjct: 423 DATFLDQEGV-SRPIVLASFRMLLERALLTIIEQHCDQAGIVWTPETAPFDVHLIRLGKQ 481

Query: 562 SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
            +  + A  + + L +  +++  D RNET   K  +  +  +P+ ++ GD+  ++  + I
Sbjct: 482 DATRQAADALYDELIAAGIAVLYDDRNETAGVKFNDADLIGLPLRLVIGDRFLTDGLVEI 541

Query: 622 RRFGSTTTQKVSLLDAIPILTK 643
           ++  +    K+   + I  + K
Sbjct: 542 KQRATGMITKMPRQEIIAEVQK 563



 Score = 47.5 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 16/98 (16%), Positives = 33/98 (33%), Gaps = 6/98 (6%)

Query: 268 WHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADD 326
           +   G ++ + L +    ++     +EI    +        S    S      +     D
Sbjct: 41  FLPIGTRVLRRLEAMAHEELTRIGAQEI---HLPPVRTLSASDRVQSRLLPASSTMHGSD 97

Query: 327 TIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAE 364
             +  R  A  P +     ++    + SYR+LP  L +
Sbjct: 98  QSR--RLLAFDPTDTTTIASLAASEIASYRQLPALLYQ 133


>gi|52081235|ref|YP_080026.1| histidyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52786615|ref|YP_092444.1| histidyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|319644798|ref|ZP_07999031.1| histidyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
 gi|81690957|sp|Q65GR3|SYH_BACLD RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|52004446|gb|AAU24388.1| histidyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52349117|gb|AAU41751.1| HisS [Bacillus licheniformis ATCC 14580]
 gi|317392607|gb|EFV73401.1| histidyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
          Length = 424

 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 64/416 (15%), Positives = 127/416 (30%), Gaps = 65/416 (15%)

Query: 276 FQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           +Q +    R       Y+EI TP        +          ++   +      K  R+ 
Sbjct: 20  WQYVEKIARETCHAYQYKEIRTPIF---EHTELFSRGVGESTDIVQKEMYTFADKKGRSL 76

Query: 335 ALKPMNCPGHVAVFNHGLKSYREL------PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQ 388
            L+P    G  +     +    +L      P +L   G ++R E   +     R R F Q
Sbjct: 77  TLRP---EGTASAVRSFV--ENKLFANPVQPTKLYYIGPMFRYERPQT----GRYRQFYQ 127

Query: 389 DDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK--------------IMVKLSTRPEKR 434
                  + +   +   ++  L +S+Y+  G                    + +      
Sbjct: 128 FGIEAIGSNDPAIDA--EVIALAMSVYRKAGLSNLKLVINSLGDKESRTAHREALIRHFE 185

Query: 435 VGSDALWDDAENIMKG----VLDTIKNSSQDRINTG------VLLGEGAFY--------- 475
              D    D +  ++     +LD  K+   + + T       +     A++         
Sbjct: 186 PRIDEFCSDCQKRLRQNPLRILDCKKDRDHELLKTAPSILDYLNEESKAYFAKVQQYLTD 245

Query: 476 -GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS--------EKCHPVMIHRA 526
            G  FE       G D+   T     +    F A    +          E   P      
Sbjct: 246 IGIAFEVDPNLVRGLDYYNHTAFEIMSNAEGFGAITTLAGGGRYDGLTEEFGGPKAPGIG 305

Query: 527 VFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF 586
              SIER +  +  + +         I   + T+   A +Y+  +   L+   +S E D+
Sbjct: 306 FAMSIERLLAAL--DAENVKVGADEGIDCYIVTLGDKAKDYSVSLLYKLREAGISAEIDY 363

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             + +  + +         I + G+ E ++  I ++   +   Q + L D I  L 
Sbjct: 364 EQKKMKGQFKSADRLNAKYIAVLGEDELNQNQINVKDGKTGDQQAIGLDDFIRFLK 419


>gi|332880939|ref|ZP_08448609.1| glycine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str. F0087]
 gi|332681113|gb|EGJ54040.1| glycine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str. F0087]
          Length = 513

 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 54/340 (15%), Positives = 109/340 (32%), Gaps = 56/340 (16%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T +   T  L+P    G    + +  K+   +LP  +A+ G  +RNE  
Sbjct: 194 FNLMFKTEVGSTAEGSSTIYLRPETAQGIFVNYLNVQKTGRMKLPFGIAQIGKAFRNEIV 253

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
            +   + R+R F Q +   F     E  + E  K   +       FG E        +  
Sbjct: 254 -ARQFIFRMREFEQMEMQYFVKPGTELQWFETWKKTRMAWHQALGFGAENYRFHDHEKLA 312

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIG-RDW 491
                                                 +  F+ P   +  K+  G    
Sbjct: 313 HYAN-------------------------------AASDIEFHMP---FGFKEVEGIHSR 338

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK-------- 543
               +        +   ++    +E   P +I  ++ G    F+ IM  +++        
Sbjct: 339 TNFDLSQHAKYSGKKIEYFDPETNESYTPYVIETSI-GVDRMFLSIMCHSYEEEKLENGE 397

Query: 544 ----GNLPLWLSPIQAIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
                 LP  L+P++  V  +       E A EI + L+  H + + D ++ +I  + R 
Sbjct: 398 TRVVLKLPEALAPVKLAVMPLVKKDGLPEKAHEIISNLR-FHFNCKYDEKD-SIGKRYRR 455

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
                 P  +        + ++ +R   +   ++V++ D 
Sbjct: 456 QDAIGTPYCVTVDYDTLKDNTVTLRHRDTMEQKRVNIADL 495


>gi|330996112|ref|ZP_08320005.1| glycine--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
 gi|329573883|gb|EGG55464.1| glycine--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
          Length = 513

 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 54/340 (15%), Positives = 109/340 (32%), Gaps = 56/340 (16%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T +   T  L+P    G    + +  K+   +LP  +A+ G  +RNE  
Sbjct: 194 FNLMFKTEVGSTAEGSSTIYLRPETAQGIFVNYLNVQKTGRMKLPFGIAQIGKAFRNEIV 253

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
            +   + R+R F Q +   F     E  + E  K   +       FG E        +  
Sbjct: 254 -ARQFIFRMREFEQMEMQYFVKPGTELQWFETWKKTRMAWHQALGFGAENYRFHDHEKLA 312

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIG-RDW 491
                                                 +  F+ P   +  K+  G    
Sbjct: 313 HYAN-------------------------------AASDIEFHMP---FGFKEVEGIHSR 338

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK-------- 543
               +        +   ++    +E   P +I  ++ G    F+ IM  +++        
Sbjct: 339 TNFDLSQHAKYSGKKIEYFDPETNESYTPYVIETSI-GVDRMFLSIMCHSYEEEKLENGE 397

Query: 544 ----GNLPLWLSPIQAIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
                 LP  L+P++  V  +       E A EI + L+  H + + D ++ +I  + R 
Sbjct: 398 TRVVLKLPEALAPVKLAVMPLVKKDGLPEKAHEIISNLR-FHFNCKYDEKD-SIGKRYRR 455

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
                 P  +        + ++ +R   +   ++V++ D 
Sbjct: 456 QDAIGTPYCVTVDYDTLKDNTVTLRHRDTMEQKRVNIADL 495


>gi|148241646|ref|YP_001226803.1| seryl-tRNA synthetase [Synechococcus sp. RCC307]
 gi|166223304|sp|A5GRE1|SYS_SYNR3 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|147849956|emb|CAK27450.1| Seryl-tRNA synthetase [Synechococcus sp. RCC307]
          Length = 425

 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/234 (16%), Positives = 80/234 (34%), Gaps = 20/234 (8%)

Query: 220 IYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED----GSGVIFWHRKGWKI 275
             G +     E+ ++    +  +  +H +LA  + LF          S  I     G ++
Sbjct: 117 PEGKSEADNVEVKRWGEPRQGKDLEEHWQLADRLGLFETERSVRIAQSRFITLMGDGARL 176

Query: 276 FQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
            + LIS+M        Y E+  P +++      SG    +    F     D         
Sbjct: 177 ERALISFMLDLHSTKGYTEVMPPILVNSASLTGSGQLPKFAEESFRCADDD--------L 228

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDA 391
            L P       ++    + +  +LP++ A +   +R E         GL+R+  F + + 
Sbjct: 229 WLTPTAEVPLTSLHRDEVIAVEQLPLKYAAYTPCFRREAGSYGRDTRGLIRLHQFNKVEL 288

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE----KRVGSDALW 441
           + FC  E+      ++     ++ +        ++L T        R     +W
Sbjct: 289 YWFCHPEKSAEAHEQLTLDAEAVLEALELPYRRLELCTGDMGFSAARTYDLEVW 342


>gi|259507795|ref|ZP_05750695.1| glycine--tRNA ligase [Corynebacterium efficiens YS-314]
 gi|59798591|sp|Q8FNG6|SYG_COREF RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|259164588|gb|EEW49142.1| glycine--tRNA ligase [Corynebacterium efficiens YS-314]
          Length = 461

 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 49/329 (14%), Positives = 108/329 (32%), Gaps = 31/329 (9%)

Query: 328 IKDLRTFALKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
             +     L+P    G    F +    S  + P  +A  G  +RNE +   + + R R F
Sbjct: 152 DDEEGLHYLRPETAQGIFVNFKNVMNSSRMKPPFGIANIGKSFRNEITPG-NFIFRTREF 210

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
            Q +   F    +         +     Y D G     ++L   P++++   + +     
Sbjct: 211 EQMEMEFFVKPGEDEEWHQHWIDARHQWYIDLGVNPDNLRLYEHPQEKL---SHYSKRTV 267

Query: 447 IMKGVLDTIKNSSQD------RINTGVLLGEGAFYGPKFEYILKD-AIGRDWQCGTIQVD 499
            ++   +   +   +      R +  +        G   +    D   G  W    I+  
Sbjct: 268 DIEYAFNFANSKWGELEGIANRTDYDL---RVHSEGSGEDLSYFDQETGERWIPYVIEPA 324

Query: 500 FNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTT 559
             L      F ++++ E   P     +  G  +R +          L   L+P++  V  
Sbjct: 325 AGLGRAMMVFLMDAYHEDEAP----NSKGGVDKRVV--------LKLDRRLAPVKVAVLP 372

Query: 560 ITSSAV--EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASER 617
           ++        A+++A  L+    ++E D     I  + R       P  +        + 
Sbjct: 373 LSKKPELSGPAEKLAAELRQF-WNVEYDTSGA-IGRRYRRQDEIGTPFCVTVDFDTLEDN 430

Query: 618 SIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           ++ +R   +    +V L +    L ++ +
Sbjct: 431 AVTVRERDTMEQIRVPLDELQGYLAQQLI 459


>gi|33861744|ref|NP_893305.1| seryl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris str.
           CCMP1986]
 gi|46577195|sp|Q7V0R7|SYS_PROMP RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|33640112|emb|CAE19647.1| Seryl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris str.
           CCMP1986]
          Length = 424

 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 58/356 (16%), Positives = 123/356 (34%), Gaps = 26/356 (7%)

Query: 110 KEQPFSSDELAQIEKKMQEIIA-RDSPFLKQYLSHEKARELFESKKEAYKV-EILESIPA 167
           +E P   ++   +  K+ +I   R+    ++ +  E    +   + E+ K+ +I+     
Sbjct: 8   RENPTFVEDNLSLRGKVYDIARIRELSLERKEIDTE----ISSLQSESKKLSKIIGQEIR 63

Query: 168 KENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNT 227
             N+      E  D      ++ +   ++   L K          N P      G   N 
Sbjct: 64  NSNINSKELNELKDKGNKYRIKVSEFEEQKRILDKQLQDEISKLPNLPSKDAPLGENENN 123

Query: 228 QQELTQYLYFLEESEKRDHRKLAREMDLFH----IAEDGSGVIFWHRKGWKIFQTLISYM 283
             ++ ++   L +   + H ++   ++LF          S  I     G ++ + L+++M
Sbjct: 124 NIQIKEWGDPLTKDNLKAHWEIGENLNLFDSVKSTKISKSRFITLTGNGARLERALVNFM 183

Query: 284 RR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
                 + Y E+  P +++    Q SG    +     + KCA+D         L P    
Sbjct: 184 LDVHSNNGYLELMPPALVNSESLQGSGQLPKFSNE--SFKCAND------DLWLSPTAEV 235

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQ 399
              A   + +   + LP++   +   +R E         GL+R+  F + + + FC   +
Sbjct: 236 PLTAFHKNEIIDPKILPLKYVAYSPCFRREAGSYGRDTKGLIRLHQFNKVELYWFCHPNK 295

Query: 400 MFNECLKIHNLIISIYKDFGFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGV 451
                 +I     SI K        V + T        R     +W  +    + +
Sbjct: 296 SLEAHKEITADAESILKKLNLPYRSVDICTGDLGFSSSRTFDLEVWLPSSQCYREI 351


>gi|261416780|ref|YP_003250463.1| seryl-tRNA synthetase [Fibrobacter succinogenes subsp. succinogenes
           S85]
 gi|261373236|gb|ACX75981.1| seryl-tRNA synthetase [Fibrobacter succinogenes subsp. succinogenes
           S85]
 gi|302326186|gb|ADL25387.1| serine--tRNA ligase [Fibrobacter succinogenes subsp. succinogenes
           S85]
          Length = 428

 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 47/325 (14%), Positives = 103/325 (31%), Gaps = 43/325 (13%)

Query: 108 FDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPA 167
            D E+     E+ +++ +      R     K+  + ++A+              ++ +  
Sbjct: 33  VDNERRPLLTEVERLKSERNAQSKRIGELKKKGENADEAQAATRELGNK-----IDELDK 87

Query: 168 KENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNT 227
           K     Y+Q E        HV +        K                            
Sbjct: 88  KLKELDYKQTEMLM-----HVPNIAPRSPEGKDSS------------------DNVVEKD 124

Query: 228 QQELTQYLYFLEESEKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISY- 282
                 Y    ++  + DH+ L   + +F         GSG   +   G ++ + LI + 
Sbjct: 125 GPIPFDYYTKNDDFARVDHKTLGERLGIFDFERGAKISGSGFPVYRGLGSRLERALIQFF 184

Query: 283 MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
           +    K  +EE   P ++ ++  + +G    +  +M+     DD         L P    
Sbjct: 185 LDEHQKAGFEEFTPPYLVTRNTMRGTGQLPKFEEDMYRCDKDDD-------LFLIPTAEV 237

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQ 399
               +++  +    ELP R+  + + +R E         GL+R+  F + +   F   E 
Sbjct: 238 PLTNLYSGEVIPESELPKRICAYSACFRREAGSYGKDTRGLLRLHQFNKVEMVYFAHPEH 297

Query: 400 MFNECLKIHNLIISIYKDFGFEKIM 424
            + +  ++      + +  G     
Sbjct: 298 SYEDHEELTRFGEKLLEKLGLPYHR 322


>gi|332886158|gb|EGK06402.1| glycyl-tRNA synthetase [Dysgonomonas mossii DSM 22836]
          Length = 512

 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 55/333 (16%), Positives = 104/333 (31%), Gaps = 30/333 (9%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    F +  K+   ++P  +A+ G  +RNE  
Sbjct: 193 FNLMFSTEMGSTADGAMKVYLRPETAQGIFVNFLNVQKTGRMKIPFGIAQIGKAFRNEIV 252

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
            +   + R+R F Q +   F     E  +    K   +       FG  K       +  
Sbjct: 253 -ARQFIFRMREFEQMEMQFFVRPGEELDWFAKWKEVRMKWHKSLGFGDNKYRFHDHDKLA 311

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
                    + A +I            +  +  G    EG      F+     A    + 
Sbjct: 312 HYA------NAATDI------------EFEMPFGFKEVEGIHSRTDFDL----ASHEKFS 349

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
              +Q      ++    YV   S     + +        E  +          LP  L+P
Sbjct: 350 GKKLQYFDPELNKSYTPYVIETSIGVDRMFLSTLSAAYAEEVLEDGETRVVLRLPAALAP 409

Query: 553 IQAIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           I+  V  +       E A+EI + LK      + D ++ +I  + R       P  +   
Sbjct: 410 IKLAVLPLVKKDGLPEKAREIIDTLK-FDFKCQYDEKD-SIGKRYRRQDAIGTPYCVTVD 467

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +   + ++ IR   +   ++V++     I+  
Sbjct: 468 HQSLQDNTVTIRYRDTMQQERVAIDKLSDIIAD 500


>gi|258511548|ref|YP_003184982.1| glycyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257478274|gb|ACV58593.1| glycyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 464

 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 52/330 (15%), Positives = 103/330 (31%), Gaps = 23/330 (6%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            NM        T        L+P    G    F +  ++  ++LP  + +FG  +RNE +
Sbjct: 149 FNMMFRTFQGVTEDAANEVYLRPETAQGIFVNFKNVQRTMRKKLPFGIGQFGKSFRNEIT 208

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              + + R R F Q +   FC   +            +      G +   ++     +++
Sbjct: 209 PG-NFIFRTREFEQMELEFFCAPGEDEKWFAYWRQTCMDWLLSLGIKPDHLRFRDHAKEQ 267

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           +   + +  A   ++          +     G LLG       + +Y LK       +  
Sbjct: 268 L---SHYSKATTDIE---------YRFPFGWGELLGVAN----RTDYDLKAHQEHSGENM 311

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQ 554
            +Q +   P      Y    S     + +        E  +          L   L+P Q
Sbjct: 312 MVQEEGQEP---FIPYCIEPSIGADRLFLAVFADAYDEEEVAEGDTRVVLRLHPKLAPYQ 368

Query: 555 AIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
             V  ++    E A  +   L     S + D    +I  + R       P  +    +  
Sbjct: 369 VAVLPLSKKLNEPAHRLYLDLIKT-YSADYDETG-SIGKRYRRQDEIGTPFCVTYDFESE 426

Query: 615 SERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           S+  + IR   S    ++ +      L ++
Sbjct: 427 SDGQVTIRMRDSMEQVRIPIEGVRTWLDEQ 456


>gi|255038651|ref|YP_003089272.1| glycyl-tRNA synthetase [Dyadobacter fermentans DSM 18053]
 gi|254951407|gb|ACT96107.1| glycyl-tRNA synthetase [Dyadobacter fermentans DSM 18053]
          Length = 494

 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 57/391 (14%), Positives = 118/391 (30%), Gaps = 51/391 (13%)

Query: 271 KGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           K   +   +   +  +  +   E+   + +   +   +   +  + N+          +D
Sbjct: 122 KAKALLAEMGRLLSAEDLNGVRELIIAEDIKCQVSGTTNWTEVRQFNLMFSTQVGSVAED 181

Query: 331 LRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
                L+P    G    F +  KS   ++P  +A+ G  +RNE   +   + R+R F Q 
Sbjct: 182 ANMIYLRPETAQGIFVNFLNVQKSGRMKVPFGIAQIGKAFRNEIV-ARQFIFRMREFEQM 240

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMK 449
           +   F           K     +  +K  G     +K               D   +  K
Sbjct: 241 EMQFFVRPGTEQEWYEKWKEARLKFHKAIGLPAEKLKYHDH-----------DKLAHYAK 289

Query: 450 GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAF 509
             +D      +     G    EG                 D+     Q       ++   
Sbjct: 290 AAVDI-----EFEFPFGFREIEGIH------------SRSDFDLRNHQELSKKKQQYFDA 332

Query: 510 YVNSHSEKCHPVM--IHRAVFGSIERFIGIMI---------------ENFKGNLPLWLSP 552
            ++ + +     +  +     G+   F+                   E     L   L+P
Sbjct: 333 DLDENGKPYGNYIPYVVETSVGADRLFLATFCNAYTVESVGEGDAAKERTFLKLHPALAP 392

Query: 553 IQAIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
            +A V  +       E AQ +AN LKS   ++  D  N  I  +     +   P  I+  
Sbjct: 393 FKAAVLPLVKKDGLAEKAQALANSLKSSFRTVYDD--NAAIGKRYTRQDLIGTPYCIVVD 450

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            +   + ++ IR   +   ++V + +    +
Sbjct: 451 YQTMEDDTVTIRHRDTMEQERVHISELKEKI 481


>gi|163753255|ref|ZP_02160379.1| glycyl-tRNA synthetase [Kordia algicida OT-1]
 gi|161326987|gb|EDP98312.1| glycyl-tRNA synthetase [Kordia algicida OT-1]
          Length = 513

 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 60/348 (17%), Positives = 115/348 (33%), Gaps = 41/348 (11%)

Query: 308 SGHWDSYRA-NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEF 365
           S +W   +  N+        +        L+P    G    F +  K+   ++P  +A+ 
Sbjct: 186 SKNWTEVKQFNLMFGTKLGASADTAMDLYLRPETAQGIFVNFLNVQKTGRMKIPFGIAQT 245

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKI 423
           G  +RNE   +   + R R F Q +   F     +Q + E  K + +   +    G +  
Sbjct: 246 GKAFRNEIV-ARQFIFRQREFEQMEMQFFVKPGTQQEWYEQWKENRMKWHLSLGMGEDNY 304

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
                 +      + A  +         L+ I + +   ++         F G K +Y  
Sbjct: 305 RFHDHEKLAHYADAAADIEFKFPFGFKELEGIHSRTDFDLSQHEE-----FSGKKLQYF- 358

Query: 484 KDAIGRDWQCG-----TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            D   ++         +I +D    + F+   +N   E                      
Sbjct: 359 -DHESKESYVPYVVETSIGLDRMFLAVFSNSLINETLEDGS------------------- 398

Query: 539 IENFKGNLPLWLSPIQAIVTTIT--SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
            E     LP  L+P +A V  +       E A++I + LK    ++  D ++  +  + R
Sbjct: 399 -ERVVLRLPAVLAPTKAAVLPLIKRDGLPEIARKIVDDLK-FDFNVIYDEKDA-VGRRYR 455

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
                  P  I        +  + IR   +   Q+V + D   I+ KE
Sbjct: 456 RQDAAGTPFCITVDHDTLEDNMVTIRHRDTMEQQRVKIEDVRGIINKE 503


>gi|118468169|ref|YP_888757.1| glycyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
 gi|118169456|gb|ABK70352.1| glycyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
          Length = 461

 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 58/368 (15%), Positives = 124/368 (33%), Gaps = 21/368 (5%)

Query: 280 ISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPM 339
            +Y  +K  DD + +   ++       +    +    NM           +     L+P 
Sbjct: 104 EAYAEKKGIDDPDSVPMSEISCPDCGTKGQWTEPRDFNMMLKTYLGPIESEDGLHYLRPE 163

Query: 340 NCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE 398
              G    F + + +  ++ P  + + G  +RNE +   + + R R F Q +   F    
Sbjct: 164 TAQGIFVNFANVVTTARKKPPFGIGQIGKSFRNEITPG-NFIFRTREFEQMEMEFFVEPS 222

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV--GSDALWDDAENIMKGVLDTIK 456
                     +  +  Y D G ++  ++L   P++++   SD   D             +
Sbjct: 223 TAAEWHQYWIDTRLQWYVDLGIDRDNLRLYEHPKEKLSHYSDRTVDIEYKFGFQGNPWGE 282

Query: 457 NSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE 516
                      L       G    +  + A  R      I+    L     AF V++++E
Sbjct: 283 LEGVANRTNFDLSTHAKHSGVDLSFYDQAADTRYVP-YVIEPAAGLTRSLMAFLVDAYTE 341

Query: 517 KCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT--SSAVEYAQEIANL 574
              P        G  +R +          L   L+P++A V  ++  +     A+++A  
Sbjct: 342 DEAPNAKG----GVDKRTV--------LKLDPRLAPVKAAVLPLSRHADLSPKARDLAAE 389

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           L+  + ++E D     I  + R       P  +        + ++ IR   + T +++++
Sbjct: 390 LR-RNWNVEFDDAGA-IGRRYRRQDEIGTPYCVTVDFDSLEDNAVTIRERDAMTQERIAI 447

Query: 635 LDAIPILT 642
                 L 
Sbjct: 448 DKVSDYLA 455


>gi|295839019|ref|ZP_06825952.1| glycine-tRNA ligase [Streptomyces sp. SPB74]
 gi|295827291|gb|EFG65335.1| glycine-tRNA ligase [Streptomyces sp. SPB74]
          Length = 460

 Score = 75.6 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 54/334 (16%), Positives = 97/334 (29%), Gaps = 49/334 (14%)

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
                T        L+P    G    F    L S R+ P  +A+ G  +RNE +   + +
Sbjct: 145 THLGPTQDTGSVAYLRPETAQGIFTNFAQVKLTSRRKPPFGIAQMGKSFRNEITPG-NFI 203

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            R R F Q +   F    +             + Y   G  +  ++    P+        
Sbjct: 204 FRTREFEQMEMEFFVKPGEDEKWQEYWMEQRWNWYTGLGLREENMRWFEHPK-------- 255

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDF 500
            +   +  K   D            G L G             K A G+D          
Sbjct: 256 -EKLSHYSKRTADIEYRFQFGGSEWGELEGVANRTDYDLSAHAK-ASGQDLS-------- 305

Query: 501 NLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK----------------G 544
                   +      E   P +I     G     +  M++ +                  
Sbjct: 306 --------YRDQEAGENWTPYVIE-PAAGVGRTMLAFMLDAYAEDEAPNAKGKLEKRVVM 356

Query: 545 NLPLWLSPIQAIVTTIT--SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            L   L+P++A V  ++        A+ +A  L+ H  +I+ D     I  + R      
Sbjct: 357 RLDPRLAPVKAAVLPLSRNPELSPKAKSLAAALRQH-WNIDFDDAGA-IGRRYRRQDEIG 414

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
            P  +        + ++ +R   +   ++VSL  
Sbjct: 415 TPFCVTVDFDTLDDNAVTVRERDTMKQERVSLDQ 448


>gi|309802149|ref|ZP_07696258.1| glycine--tRNA ligase [Bifidobacterium dentium JCVIHMP022]
 gi|308221229|gb|EFO77532.1| glycine--tRNA ligase [Bifidobacterium dentium JCVIHMP022]
          Length = 491

 Score = 75.6 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 57/379 (15%), Positives = 111/379 (29%), Gaps = 48/379 (12%)

Query: 278 TLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALK 337
            L      K  D   E     ++      +    +    NM           +     L+
Sbjct: 102 KLEESYAEKHGDKLPENGLKDIVCPDCGTRGNWTEPRDFNMMLRTHLGPVEDENSLHYLR 161

Query: 338 PMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT 396
           P    G    F +    S  + P  +A  G  +RNE +   + + R R F Q +   F  
Sbjct: 162 PETAQGIFVDFKNVMTSSRSKPPFGIANMGKSFRNEITPG-NFIFRTREFEQMEMEFFVA 220

Query: 397 KEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIK 456
                       +     Y D G +   ++    P+         +   +  K  +D   
Sbjct: 221 PGTDEEWHQYWIDARTQWYIDLGVKPENLRHYEHPK---------EKLAHYSKRTVDIEY 271

Query: 457 NSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE 516
                  + G L G            + +    D          +L      ++  +  E
Sbjct: 272 KFGFQGSDWGELEG------------VANRTDFDLSAHAKHSGEDLS-----YFNQATGE 314

Query: 517 KCHPVMIHRAVFGSIERFIGIMIENFK----------------GNLPLWLSPIQAIVTTI 560
           K  P +I     G     +  +++ +                   L   L+P++A V  +
Sbjct: 315 KYVPYVIE-PAAGLTRSLMAFLVDAYDVDEAPNTKGGVDKRTVLRLDPRLAPVKAAVLPL 373

Query: 561 TSSAV--EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERS 618
           +        AQ +A  L+ H   I+ D     I  + R       P+ +        +++
Sbjct: 374 SKKPELQSVAQNLAADLRQHDWMIDYDEAGA-IGRRYRREDEIGTPLCVTVDFDTLDDQA 432

Query: 619 IGIRRFGSTTTQKVSLLDA 637
           + IR   +   ++V+L   
Sbjct: 433 VTIRERDTMQQERVALDKV 451


>gi|67483002|ref|XP_656795.1| phosphoribulokinase /uridine kinase family protein [Entamoeba
           histolytica HM-1:IMSS]
 gi|56474016|gb|EAL51410.1| phosphoribulokinase /uridine kinase family protein [Entamoeba
           histolytica HM-1:IMSS]
          Length = 579

 Score = 75.6 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 40/199 (20%), Positives = 81/199 (40%), Gaps = 9/199 (4%)

Query: 7   LTFPDGSIKNFPVHATGSDVAESIS-RSLAKKAVAVA-INGKVCDLSDPVREG--SIEII 62
           +TF DG+     +H     +   +S  SL    +    +NG+V   +  +  G  ++  +
Sbjct: 28  VTFTDGTQ---EIHTRPLHLTTLLSHPSLNNNELVGIMVNGRVYSTNASINVGLANVVPV 84

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWP-EVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
                   ++ R S   + A A    +  +  V +   + +G+  +    + F+ +E   
Sbjct: 85  FLNSYEGFSIYRRSLVMVFATAAYMTYGTKFGVTVEHHVNNGYCINKSDGKEFTEEECNT 144

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           I+ KM E+I  +    +  LS+ +A   F        + +L+S   +E    Y +G +  
Sbjct: 145 IKHKMDELINGNKEIKEVVLSYAEAINYFTKTNRRMTLSLLKSNNNEEIKCSYLEG-FMT 203

Query: 182 LCRGPHVRSTGQVKKFFKL 200
           L   P +  TG +K F  +
Sbjct: 204 LFVRPLLGRTGILKDFNLI 222


>gi|32476484|ref|NP_869478.1| glycyl-tRNA synthetase [Rhodopirellula baltica SH 1]
 gi|32447029|emb|CAD78935.1| glycyl-tRNA synthetase [Rhodopirellula baltica SH 1]
          Length = 558

 Score = 75.6 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 56/352 (15%), Positives = 110/352 (31%), Gaps = 37/352 (10%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR-ELPVRLAEFGSVYRNEPS 374
            N+           +  T  L+P    G    F + + S R  +P  + + G  +RNE +
Sbjct: 212 FNLMFKTTLGALGGEEDTTFLRPETAQGIFVNFKNVVDSSRVRIPFGIGQVGKSFRNEIT 271

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              +   R R F Q +   FC   Q         +  ++ Y   G     + +     + 
Sbjct: 272 PR-NFTFRSREFEQMEIEFFCHPNQSQEWYRYWRDRRMAWYTKLGLSNESLIMREHHTE- 329

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
                  + A   +                 G L G            ++  +       
Sbjct: 330 -------ELAHYSVGTADIEYAFPFLPEGEYGELEGIAHRGDFDLRSHMEGKLDPATNPM 382

Query: 495 TIQVDFNLPSRFN------AFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK----- 543
           T++++ +   +        A+  +  +EK  P +I     G+    +  + E +      
Sbjct: 383 TVELNEHGKPKHRGSGKDLAYRDDITNEKFVPHVIE-PSAGADRAALAFLCEAYTEDEAP 441

Query: 544 -----------GNLPLWLSPIQAIV--TTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
                        L   L+PI+A V          E AQEI   LK H  ++  D +   
Sbjct: 442 DENGKMQTRTVMKLDPRLAPIKAAVFPLVKKDGMPEVAQEIYGALKEH-YNVFYDAKGA- 499

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +  + R       P  I       +++++ IR   +    +V + D +  + 
Sbjct: 500 VGRRYRRQDEAGTPYCITVDGDSLTDKTVTIRDRDTLEQTRVKIDDVVSEIQ 551


>gi|283456448|ref|YP_003361012.1| glycyl-tRNA synthetase [Bifidobacterium dentium Bd1]
 gi|283103082|gb|ADB10188.1| GlyS Glycyl-tRNA synthetase [Bifidobacterium dentium Bd1]
          Length = 438

 Score = 75.6 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 57/379 (15%), Positives = 112/379 (29%), Gaps = 48/379 (12%)

Query: 278 TLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALK 337
            L      K  D   E     ++      +    +    NM           +     L+
Sbjct: 49  KLEESYAEKHGDKLPENGLKDIVCPDCGTRGNWTEPRDFNMMLRTHLGPVEDENSLHYLR 108

Query: 338 PMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT 396
           P    G    F +    S  + P  +A  G  +RNE +   + + R R F Q +   F  
Sbjct: 109 PETAQGIFVDFKNVMTSSRSKPPFGIANMGKSFRNEITPG-NFIFRTREFEQMEMEFFVA 167

Query: 397 KEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIK 456
                       +     Y D G +   ++    P+         +   +  K  +D   
Sbjct: 168 PGTDEEWHQYWIDARTQWYIDLGVKPENLRHYEHPK---------EKLAHYSKRTVDIEY 218

Query: 457 NSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE 516
                  + G L G            + +    D          +L      ++  +  E
Sbjct: 219 KFGFQGSDWGELEG------------VANRTDFDLSAHAKHSGEDLS-----YFNQATGE 261

Query: 517 KCHPVMIHRAVFGSIERFIGIMIENFK----------------GNLPLWLSPIQAIVTTI 560
           K  P +I     G     +  +++ +                   L   L+P++A V  +
Sbjct: 262 KYVPYVIE-PAAGLTRSLMAFLVDAYDVDEAPNTKGGVDKRTVLRLDPRLAPVKAAVLPL 320

Query: 561 TSSAV--EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERS 618
           +        AQ +A+ L+ H   I+ D     I  + R       P+ +        +++
Sbjct: 321 SKKPELQSVAQNLADDLRQHDWMIDYDEAGA-IGRRYRREDEIGTPLCVTVDFDTLDDQA 379

Query: 619 IGIRRFGSTTTQKVSLLDA 637
           + IR   +   ++V+L   
Sbjct: 380 VTIRERDTMQQERVALDKV 398


>gi|327543225|gb|EGF29659.1| glycyl-tRNA synthetase [Rhodopirellula baltica WH47]
          Length = 555

 Score = 75.6 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 56/352 (15%), Positives = 110/352 (31%), Gaps = 37/352 (10%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR-ELPVRLAEFGSVYRNEPS 374
            N+           +  T  L+P    G    F + + S R  +P  + + G  +RNE +
Sbjct: 209 FNLMFKTTLGALGGEEDTTFLRPETAQGIFVNFKNVVDSSRVRIPFGIGQVGKSFRNEIT 268

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              +   R R F Q +   FC   Q         +  ++ Y   G     + +     + 
Sbjct: 269 PR-NFTFRSREFEQMEIEFFCHPNQSQEWYRYWRDRRMAWYTKLGLSNESLIMREHHTE- 326

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
                  + A   +                 G L G            ++  +       
Sbjct: 327 -------ELAHYSVGTADIEYAFPFLPEGEYGELEGIAHRGDFDLRSHMEGKLDPATNPM 379

Query: 495 TIQVDFNLPSRFN------AFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK----- 543
           T++++ +   +        A+  +  +EK  P +I     G+    +  + E +      
Sbjct: 380 TVELNEHGKPKHRGSGKDLAYRDDITNEKFVPHVIE-PSAGADRAALAFLCEAYTEDEAP 438

Query: 544 -----------GNLPLWLSPIQAIV--TTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
                        L   L+PI+A V          E AQEI   LK H  ++  D +   
Sbjct: 439 DENGKMQTRTVMKLDPRLAPIKAAVFPLVKKDGMPEVAQEIYGALKEH-YNVFYDAKGA- 496

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +  + R       P  I       +++++ IR   +    +V + D +  + 
Sbjct: 497 VGRRYRRQDEAGTPYCITVDGDSLTDKTVTIRDRDTLEQTRVKIDDVVSEIQ 548


>gi|302518917|ref|ZP_07271259.1| glycyl-tRNA synthetase [Streptomyces sp. SPB78]
 gi|318059913|ref|ZP_07978636.1| glycyl-tRNA synthetase [Streptomyces sp. SA3_actG]
 gi|318081299|ref|ZP_07988631.1| glycyl-tRNA synthetase [Streptomyces sp. SA3_actF]
 gi|333027254|ref|ZP_08455318.1| putative glycyl-tRNA synthetase [Streptomyces sp. Tu6071]
 gi|302427812|gb|EFK99627.1| glycyl-tRNA synthetase [Streptomyces sp. SPB78]
 gi|332747106|gb|EGJ77547.1| putative glycyl-tRNA synthetase [Streptomyces sp. Tu6071]
          Length = 460

 Score = 75.6 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 54/334 (16%), Positives = 97/334 (29%), Gaps = 49/334 (14%)

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
                T        L+P    G    F    L S R+ P  +A+ G  +RNE +   + +
Sbjct: 145 THLGPTQDTGSVAYLRPETAQGIFTNFAQVKLTSRRKPPFGIAQMGKSFRNEITPG-NFI 203

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            R R F Q +   F    +             + Y   G  +  ++    P+        
Sbjct: 204 FRTREFEQMEMEFFVKPGEDEKWQEYWMEQRWNWYTGLGLREENMRWFEHPK-------- 255

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDF 500
            +   +  K   D            G L G             K A G+D          
Sbjct: 256 -EKLSHYSKRTADIEYRFQFGGSEWGELEGVANRTDYDLSAHAK-ASGQDLS-------- 305

Query: 501 NLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK----------------G 544
                   +      E   P +I     G     +  M++ +                  
Sbjct: 306 --------YRDQEAGENWTPYVIE-PAAGVGRTMLAFMLDAYAEDEAPNAKGKLEKRVVM 356

Query: 545 NLPLWLSPIQAIVTTIT--SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            L   L+P++A V  ++        A+ +A  L+ H  +I+ D     I  + R      
Sbjct: 357 RLDPRLAPVKAAVLPLSRNPELSPKAKSLAAALRQH-WNIDFDDAGA-IGRRYRRQDEIG 414

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
            P  +        + ++ +R   +   ++VSL  
Sbjct: 415 TPFCVTVDFDTLDDNAVTVRERDTMKQERVSLDQ 448


>gi|227498855|ref|ZP_03928995.1| seryl-tRNA synthetase [Acidaminococcus sp. D21]
 gi|226904307|gb|EEH90225.1| seryl-tRNA synthetase [Acidaminococcus sp. D21]
          Length = 424

 Score = 75.6 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 40/244 (16%), Positives = 85/244 (34%), Gaps = 22/244 (9%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDL----FHIAEDGSGVIFWHRKGWKIF 276
           G       E+ ++        E + H  L  ++ +          G    ++   G ++ 
Sbjct: 114 GKDDTENPEVRKWGEPTHFDFEPKAHWDLGEDLGILDSNRAAKVSGGRFYYYLGLGARLE 173

Query: 277 QTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           + + ++M  +   KD Y E+  P ++++     +G    +  +M+ +        +    
Sbjct: 174 RAVYNFMLDQHTQKDGYTEVIPPYIVNRETMTGTGQLPKFHEDMYRL--------EGMEM 225

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDA 391
            L P         +   +    +LP+ L  F   +R E   +     GL+R   F + + 
Sbjct: 226 YLIPTAEVPLTNYYRDEIIDGAKLPIYLTAFTPCFRAEAGSAGRDTRGLIRQHQFHKVEM 285

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENI 447
             F   E  F+E  K+ +    I +  G    +V L T              +W  A+N 
Sbjct: 286 VKFTKPEDSFDELEKLTHDAEGILQALGLPYHVVCLCTGDLGFSATKCYDIEVWFPAQNK 345

Query: 448 MKGV 451
            + +
Sbjct: 346 YREI 349


>gi|54023426|ref|YP_117668.1| glycyl-tRNA synthetase [Nocardia farcinica IFM 10152]
 gi|59798496|sp|Q5YZT7|SYG_NOCFA RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|54014934|dbj|BAD56304.1| putative glycyl-tRNA synthetase [Nocardia farcinica IFM 10152]
          Length = 466

 Score = 75.6 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 55/357 (15%), Positives = 119/357 (33%), Gaps = 50/357 (14%)

Query: 307 QSGHWDSYRANMFAVKCADDTIKDLRTF-ALKPMNCPGHVAVFNH-GLKSYRELPVRLAE 364
           + G W   R     +K     + D      L+P    G    + +    + ++ P  +A+
Sbjct: 135 EPGRWTEPRNFSGLLKTFLGPVDDEEGLHYLRPETAQGIFINYKNVETTARKKPPFGIAQ 194

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
            G  +RNE +   + + R R F Q +   F    +         +  ++ Y D G +   
Sbjct: 195 IGKSFRNEITPG-NFIFRTREFEQMEMEFFVKPGEDEQWHQYWIDTRLAWYTDLGIDPEN 253

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           ++L   P+         +   +     +D            G L G       + +Y LK
Sbjct: 254 LRLYEHPK---------EKLSHYSTRTVDIEYRFRFQGSEWGELEGVAN----RTDYDLK 300

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
                +     +                +++E+  P +I     G     +  +++ +  
Sbjct: 301 THS--EHSGTELSYFDQ-----------ANNERYIPYVIE-PAAGLTRSLMAFLVDAYAE 346

Query: 545 NLPLW----------------LSPIQAIVTTITSSAV--EYAQEIANLLKSHHLSIETDF 586
           +                    L+P++A V  ++ +A     A+++A  L+ H  ++E D 
Sbjct: 347 DEAPNAKGGVDVRTVLRLDRRLAPVKAAVLPLSRNADLTPKAKDLAAQLRKH-WNVEFDD 405

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
               I  + R       P  I        ++++ IR   S   ++++L      L +
Sbjct: 406 AGA-IGRRYRRQDEIGTPFCITVDFDTLEDQAVTIRERDSMAQERIALDKVEGYLAQ 461


>gi|182438813|ref|YP_001826532.1| glycyl-tRNA synthetase [Streptomyces griseus subsp. griseus NBRC
           13350]
 gi|326779468|ref|ZP_08238733.1| glycyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1]
 gi|178467329|dbj|BAG21849.1| putative glycyl-tRNA synthetase [Streptomyces griseus subsp.
           griseus NBRC 13350]
 gi|326659801|gb|EGE44647.1| glycyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1]
          Length = 460

 Score = 75.6 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 54/327 (16%), Positives = 106/327 (32%), Gaps = 25/327 (7%)

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPSGSLHGL 380
                T        L+P    G    F   L+ S ++ P  +A+ G  +RNE +   + +
Sbjct: 145 THLGPTQDSGSVAYLRPETAQGIFTNFGQVLQTSRKKPPFGIAQMGKSFRNEITPG-NFI 203

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            R R F Q +   F    +         +   + Y D G  +  ++    P+        
Sbjct: 204 FRTREFEQMEMEFFVKPGEDEEWQQYWMDQRWNWYTDLGMREENMRWFEHPK-------- 255

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VD 499
            +   +  K   D            G L G       + +Y LK     +     +Q  D
Sbjct: 256 -EKLSHYSKRTADIEYRFRFGGSEWGELEGVAN----RTDYDLKAHS--EASGTDLQFYD 308

Query: 500 FNLPSRFNAFYVNSHSEKCHPVM---IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI 556
                R+  + +   +     ++   +   V        G+M +     L   L+P++  
Sbjct: 309 QEANERWTPYVIEPAAGVGRAMLAFLLDAYVEDEAPNAKGVMEKRTVMRLDHRLAPVKVA 368

Query: 557 VTTIT--SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
           V  ++        A+ +A  L+ +  +IE D     I  + R       P  +       
Sbjct: 369 VLPLSRNPQLSPKAKGLAADLRKN-WNIEFDDAGA-IGRRYRRQDEIGTPFCVTVDFDTL 426

Query: 615 SERSIGIRRFGSTTTQKVSLLDAIPIL 641
            + ++ +R   +   ++VSL      L
Sbjct: 427 DDNAVTVRERDTMKQERVSLDQIQAYL 453


>gi|120602949|ref|YP_967349.1| alanyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
 gi|205830078|sp|A1VEQ6|SYA_DESVV RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|120563178|gb|ABM28922.1| alanyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
          Length = 879

 Score = 75.6 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/147 (22%), Positives = 64/147 (43%), Gaps = 8/147 (5%)

Query: 52  DPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDK 110
           D + +  +++   ED R  +   H+C H++  A++ +  +     G  +  D   +DF  
Sbjct: 547 DILLDQEVDLTVTEDDRVASARNHTCTHLLHAALRRVLGDHVKQAGSLVAPDRLRFDFTH 606

Query: 111 EQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN 170
             P + +ELA +E+++  +I  D P    ++ ++ A +         K          E 
Sbjct: 607 IAPMTPEELAAVEREVNRVIMADIPLETDHMHYDDAVKRGAMALFGEKY-------GDEV 659

Query: 171 VTLYRQGEWFDLCRGPHVRSTGQVKKF 197
             +    E  +LC G H+R+TGQ   F
Sbjct: 660 RVVAIADESVELCGGTHLRATGQAGLF 686


>gi|333029668|ref|ZP_08457729.1| glycyl-tRNA synthetase [Bacteroides coprosuis DSM 18011]
 gi|332740265|gb|EGJ70747.1| glycyl-tRNA synthetase [Bacteroides coprosuis DSM 18011]
          Length = 512

 Score = 75.6 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 62/368 (16%), Positives = 113/368 (30%), Gaps = 58/368 (15%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           +E     +     W +         N+        T +      L+P    G    + + 
Sbjct: 175 DEEIVCPISGTRNWTEVRQ-----FNLMFSTEMGSTAESAMKVYLRPETAQGIFVNYMNV 229

Query: 352 LKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIH 408
            KS   ++P  +A+ G  +RNE   +   + R+R F Q +   F     E  + E  K  
Sbjct: 230 QKSGRMKIPFGIAQIGKAFRNEIV-ARQFIFRMREFEQMEMQFFVRPGSELEWFEMWKAQ 288

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
            L        G E        +           + A +I            +  +  G  
Sbjct: 289 RLKWHENLGLGHENYRFHDHDKLAHYA------NAATDI------------EYLMPFGFK 330

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
             EG      F+                       S  +  Y +    K +   +     
Sbjct: 331 EVEGIHSRTDFDL----------------SQHEKFSGKSIKYFDPELNKSYVPYVVETSI 374

Query: 529 GSIERFIGIM--------IENFK---GNLPLWLSPIQAIVTTI--TSSAVEYAQEIANLL 575
           G    F+ IM        +EN       LP  L+P++  V  +       E A+EI + L
Sbjct: 375 GLDRMFLSIMAGSFCEEELENGSRVVLKLPAALAPVKLAVLPLVKKDGLPEKAREIIDDL 434

Query: 576 KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
           K  H + + D ++ +I  + R       P  I        +  + +R   +   ++V++ 
Sbjct: 435 K-FHFNCQYDEKD-SIGKRYRRQDAIGTPYCITVDHDSLKDNCVTLRNRDTMEQERVAIA 492

Query: 636 DAIPILTK 643
           D   I+  
Sbjct: 493 DLNNIIAD 500


>gi|154686897|ref|YP_001422058.1| histidyl-tRNA synthetase [Bacillus amyloliquefaciens FZB42]
 gi|166227943|sp|A7Z751|SYH_BACA2 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|154352748|gb|ABS74827.1| HisS [Bacillus amyloliquefaciens FZB42]
          Length = 424

 Score = 75.6 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 76/414 (18%), Positives = 140/414 (33%), Gaps = 57/414 (13%)

Query: 276 FQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           +Q +   MR   +   Y+EI TP        +          ++   +      +  R+ 
Sbjct: 20  WQFVEQIMRETCRTYQYKEIRTPIF---EHTELFARGVGESTDIVQKEMYTFEDRKGRSL 76

Query: 335 ALKPMNCPGHVAVFNHGLKSYREL-PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
            L+P      V  FN        + P +L   G ++R E   +     R R F Q     
Sbjct: 77  TLRPEGTAAAVRAFNENKLFANPVQPTKLYYVGPMFRYERPQT----GRFRQFYQFGIEA 132

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFG----------------FEKIMVKLSTRPEKRVG- 436
             +K+   +   ++  L +SIY+  G                 +     L    E R+G 
Sbjct: 133 IGSKDPAVDA--EVIALAMSIYRKAGLKHVKLVLNSLGDQDSRKSYREALVKHFEPRIGE 190

Query: 437 --SDALWDDAENIMKGVLDTIKNSSQDRINTG------VLLGEGAFY----------GPK 478
             SD       N ++ +LD  K+   + + T       +     A++          G  
Sbjct: 191 FCSDCQSRLHTNPLR-ILDCKKDREHELMKTAPSILDYLNEESAAYFEKVKQYLNDLGIP 249

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK--------CHPVMIHRAVFGS 530
           FE       G D+   T     +    F A    +   +          P         S
Sbjct: 250 FEIDPNLVRGLDYYNHTAFEIMSNAEGFGAITTLAGGGRYDGLVEQIGGPEAPGIGFAMS 309

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
           IER +   I+  K  LP+    I   + T+   A +Y+  +   L+   +S E D+ N+ 
Sbjct: 310 IERLLAA-IDAEKTELPVNQG-IDCYIVTLGEKAKDYSVSLVYKLREAGISSEIDYENKK 367

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  + +         I I G+ E ++  I ++   +   ++V L + I +L  +
Sbjct: 368 MKGQFKTADRLGARFIAILGEDELAQNKINVKDAETGEQREVVLDELIQVLKAD 421


>gi|46579502|ref|YP_010310.1| alanyl-tRNA synthetase [Desulfovibrio vulgaris str. Hildenborough]
 gi|48428505|sp|P61700|SYA_DESVH RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|46448916|gb|AAS95569.1| alanyl-tRNA synthetase [Desulfovibrio vulgaris str. Hildenborough]
 gi|311233316|gb|ADP86170.1| alanyl-tRNA synthetase [Desulfovibrio vulgaris RCH1]
          Length = 879

 Score = 75.6 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/147 (22%), Positives = 64/147 (43%), Gaps = 8/147 (5%)

Query: 52  DPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDK 110
           D + +  +++   ED R  +   H+C H++  A++ +  +     G  +  D   +DF  
Sbjct: 547 DILLDQEVDLTVTEDDRVASARNHTCTHLLHAALRRVLGDHVKQAGSLVAPDRLRFDFTH 606

Query: 111 EQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN 170
             P + +ELA +E+++  +I  D P    ++ ++ A +         K          E 
Sbjct: 607 IAPMTPEELAAVEREVNRVIMADIPLETDHMHYDDAVKRGAMALFGEKY-------GDEV 659

Query: 171 VTLYRQGEWFDLCRGPHVRSTGQVKKF 197
             +    E  +LC G H+R+TGQ   F
Sbjct: 660 RVVAIADESVELCGGTHLRATGQAGLF 686


>gi|42560999|ref|NP_975450.1| glycyl-tRNA synthetase [Mycoplasma mycoides subsp. mycoides SC str.
           PG1]
 gi|59798544|sp|Q6MTE4|SYG_MYCMS RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|42492496|emb|CAE77092.1| glycine-tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str.
           PG1]
 gi|301320658|gb|ADK69301.1| glycine--tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str.
           Gladysdale]
          Length = 456

 Score = 75.6 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 47/346 (13%), Positives = 102/346 (29%), Gaps = 51/346 (14%)

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YREL 358
             +   Q       ++ N   ++       D     L+P    G    F +  +S  ++L
Sbjct: 135 QKKDFTQIRQFALMFKTNQGVLED------DSSIVYLRPETAQGIFINFKNVQRSMRKKL 188

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P  + + G  +RNE +   + + R R F Q +   F       +         +   + F
Sbjct: 189 PFGIGQIGKSFRNEITPG-NFIFRTREFEQMELEFFFDPSDQKDW----FKYWLDQIELF 243

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
             +KI +  S    +    D L   +   +K                G+           
Sbjct: 244 LTKKICLDKSNYKIRENLKDEL---SHYALKTSDIEFNFPFGWGELWGISHRSD------ 294

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI- 537
           F+  +   + ++                +   +   + +     +     G     + I 
Sbjct: 295 FDLKVHQNLSKE----------------DLTVLKEENNQKVLANVIEPSVGVERLMLAIF 338

Query: 538 --------MIENFK---GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF 586
                   + EN       LP  L+P Q  +T ++    + A ++   L         D 
Sbjct: 339 WQAYTEEQLEENNSRTVLKLPYNLAPYQVAITPLSKQLNQNAHQLFLELLK-DFDAVYDE 397

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
               I  + R       P +I    +   ++ + IR   +   +++
Sbjct: 398 TGN-IGKRYRRQDAIGTPFVITYDFQTLEDQKVTIRYRDTMKQERI 442


>gi|160892619|ref|ZP_02073409.1| hypothetical protein CLOL250_00149 [Clostridium sp. L2-50]
 gi|156865660|gb|EDO59091.1| hypothetical protein CLOL250_00149 [Clostridium sp. L2-50]
          Length = 888

 Score = 75.2 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 32/134 (23%), Positives = 59/134 (44%), Gaps = 10/134 (7%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDELAQIEK 124
           D R+L    HS  H++ +A++ +  +     G  + ED   +DF   Q  + +E+A++E 
Sbjct: 565 DRRALICKNHSATHLLQKALKMVLGDHVEQAGSYVSEDRLRFDFTHFQAMTPEEIAKVEA 624

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLC 183
            + E I +D     + +S E A++         K          E V +    ++  + C
Sbjct: 625 IVNEQIDKDLKVKTEVMSIEDAKKTGAMALFGDKY--------GEKVRVVSMDDFSVEFC 676

Query: 184 RGPHVRSTGQVKKF 197
            G HV +TG +  F
Sbjct: 677 GGTHVPNTGVIGTF 690


>gi|167767297|ref|ZP_02439350.1| hypothetical protein CLOSS21_01816 [Clostridium sp. SS2/1]
 gi|167711272|gb|EDS21851.1| hypothetical protein CLOSS21_01816 [Clostridium sp. SS2/1]
          Length = 868

 Score = 75.2 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 39/155 (25%), Positives = 72/155 (46%), Gaps = 11/155 (7%)

Query: 45  GKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDG 103
           G V + +  V + ++     E  R+L    HS  H++ +A++ +        G     + 
Sbjct: 526 GHVVEGTFNVGDKAV-FTVNEKNRALGAKNHSATHLLQKALREVLGTHVEQAGSLNNAEH 584

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE 163
             +DF    P S DE+A++EK + E IA+D P + + +S E+A++         K     
Sbjct: 585 LRFDFTHFSPLSDDEIARVEKIVNEKIAQDLPVVTKVMSMEEAKKTGAMALFGEKY---- 640

Query: 164 SIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
                + V +   G++  +LC G HV++TG +  F
Sbjct: 641 ----GDEVRVVSMGDFSVELCGGTHVKNTGAITAF 671


>gi|320010915|gb|ADW05765.1| glycyl-tRNA synthetase [Streptomyces flavogriseus ATCC 33331]
          Length = 460

 Score = 75.2 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 49/334 (14%), Positives = 96/334 (28%), Gaps = 49/334 (14%)

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
                T        L+P    G    F      S ++ P  +A+ G  +RNE +   + +
Sbjct: 145 THLGPTQDTGSVAYLRPETAQGIFTNFGQVQQTSRKKPPFGIAQMGKSFRNEITPG-NFI 203

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            R R F Q +   F    +             + Y   G  +  ++    P+        
Sbjct: 204 FRTREFEQMEMEFFVKPGEDEQWQEYWMEQRWNWYTGLGLREENMRWFEHPQ-------- 255

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDF 500
            +   +  K   D            G L G                  R         + 
Sbjct: 256 -EKLSHYSKRTADIEYRFRFGGSEWGELEG---------------VANRTDYDLKAHSEA 299

Query: 501 NLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK----------------G 544
           +    F  +Y     E+  P +I     G     +  +++ +                  
Sbjct: 300 SGTDLF--YYDQEKGERYTPYVIE-PAAGVGRSMLAFLLDAYSEDEAPNAKGVMEKRAVM 356

Query: 545 NLPLWLSPIQAIVTTIT--SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            L   L+P++  V  ++        A+ +A  L+  + +IE D     I  + R      
Sbjct: 357 RLDPRLAPVKVAVLPLSRNPQLSPKAKGLAADLR-QNWNIEFDDAGA-IGRRYRRQDEIG 414

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
            P  +        + ++ +R   +   ++VSL  
Sbjct: 415 TPFCVTVDFDTLDDNAVTVRERDTMKQERVSLDQ 448


>gi|163814106|ref|ZP_02205498.1| hypothetical protein COPEUT_00259 [Coprococcus eutactus ATCC 27759]
 gi|158450555|gb|EDP27550.1| hypothetical protein COPEUT_00259 [Coprococcus eutactus ATCC 27759]
          Length = 887

 Score = 75.2 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 31/143 (21%), Positives = 63/143 (44%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFS 115
              E+    + R+L    HS  H++ +A++ +  +     G ++E G   +DF  +Q  +
Sbjct: 556 DEAELTVDAENRALICNNHSATHLLQKALKMVLGDHVEQAGSLVEPGRLRFDFSHDQAMT 615

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            +E+ ++E  + E I  D P     ++ ++A++         K          E V +  
Sbjct: 616 KEEIKKVEDIVNEQIQLDVPVCTDIMTVDEAKKTGAMALFGEKY--------GEKVRVVS 667

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G++  + C G HV +TG +  F
Sbjct: 668 IGDFSKEFCGGTHVANTGVIGMF 690


>gi|47459127|ref|YP_015989.1| glycyl-tRNA synthetase [Mycoplasma mobile 163K]
 gi|47458456|gb|AAT27778.1| glycyl-tRNA synthetase [Mycoplasma mobile 163K]
          Length = 458

 Score = 75.2 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 60/357 (16%), Positives = 115/357 (32%), Gaps = 26/357 (7%)

Query: 293 EINTPQVLDQHLWQQSGH---WDSYRANMFAVKCADDTIKDLR-TFALKPMNCPGHVAVF 348
           EI     + +++ +  G    W S R      +     ++D +    L+P         F
Sbjct: 119 EIEMENFIKRNITKYEGVATDWTSIRKFNLMFETYQGILEDSKNKIYLRPETAQAIFVNF 178

Query: 349 NHGLKSYR-ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
            + L++ R ++P  + + G  +RNE +   + + R R F Q +   F             
Sbjct: 179 KNILRTTRTKIPFGVGQIGKSFRNEVTPG-NFIFRTREFEQMELEYFVHPNDSDKAFEYY 237

Query: 408 HNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGV 467
                      G +K ++K+    ++ +   + +  A + ++   D          N G 
Sbjct: 238 LKKCYEFLIFLGIKKDLLKIRKHAKEEL---SHYSSATSDIEFKFDFGWGELLGVANRGD 294

Query: 468 LLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAV 527
                       E    D+I        +        R     + S  E+    +  R V
Sbjct: 295 FDLSSHSKATNEELSYFDSIENITYIPHVIEPSMGLDRLALAILTSSYEEETLEVDSRVV 354

Query: 528 FGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR 587
                             L  +L P Q  V  +     E ++E+   LK H+     D  
Sbjct: 355 L----------------KLNKFLVPYQIAVLPLVKKFSEESKELVKWLKQHNFRTTYDES 398

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
             +I  + R          +    + A  +S  IR   +    +++ +D I  LTKE
Sbjct: 399 A-SIGKRYRRQDAIGTFFALTYDYQSAENQSFTIRNRDTMEQIRINKIDLISYLTKE 454


>gi|169841059|ref|ZP_02874172.1| Threonyl-tRNA synthetase [candidate division TM7 single-cell
           isolate TM7a]
          Length = 52

 Score = 75.2 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/52 (57%), Positives = 38/52 (73%)

Query: 468 LLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
             G+GAFYGPK ++ +KD+IGR WQCGTIQ+DFNLP RF   Y+ +  EK  
Sbjct: 1   NPGDGAFYGPKIDFKMKDSIGRIWQCGTIQLDFNLPQRFEMSYIGADGEKHE 52


>gi|310780293|ref|YP_003968625.1| phosphoribulokinase/uridine kinase [Ilyobacter polytropus DSM 2926]
 gi|309749616|gb|ADO84277.1| phosphoribulokinase/uridine kinase [Ilyobacter polytropus DSM 2926]
          Length = 488

 Score = 75.2 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 25/175 (14%), Positives = 56/175 (32%), Gaps = 1/175 (0%)

Query: 71  AVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEII 130
                +   I+ +A   ++PE +V I   +  G Y +  K+    S+++  I+ +M E+I
Sbjct: 7   RNYYTTLKFILIKATYDLFPEAEVKIHHSLNKGIYGEILKDPKIRSEDILAIKNRMNELI 66

Query: 131 ARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRS 190
             D P     +      +            ++E      ++ +Y    ++D      + S
Sbjct: 67  REDIPIRPVIMPVCDIEKHDCIYNRPDMRRLIE-YSDWVDLRVYEMEGFYDYYHNGMLSS 125

Query: 191 TGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRD 245
           TG +  F       G   +             T      ++        +  +  
Sbjct: 126 TGYLNLFDLSPYNGGFILKYPFQNDPYRIPVETDHKKLAKIFHESEEWGQIMEVS 180


>gi|239979348|ref|ZP_04701872.1| glycyl-tRNA synthetase [Streptomyces albus J1074]
 gi|291451223|ref|ZP_06590613.1| glycyl-tRNA synthetase [Streptomyces albus J1074]
 gi|291354172|gb|EFE81074.1| glycyl-tRNA synthetase [Streptomyces albus J1074]
          Length = 460

 Score = 75.2 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 52/321 (16%), Positives = 97/321 (30%), Gaps = 23/321 (7%)

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
                T        L+P    G    F      S R+ P  +A+ G  +RNE +   + +
Sbjct: 145 THLGPTQDSGSIAYLRPETAQGIFTNFAQVQQTSRRKPPFGIAQMGKSFRNEITPG-NFI 203

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            R R F Q +   F    +             + Y   G  +  ++    P+        
Sbjct: 204 FRTREFEQMEMEFFVKPGEDEQWQEYWMEQRWNWYTGLGLREENMRWFEHPK-------- 255

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDF 500
            +   +  K   D            G L G             K A G+D        D 
Sbjct: 256 -EKLSHYSKRTADIEYRFQFGGSEWGELEGVANRTDYDLSAHAK-ASGQDLS----FFDQ 309

Query: 501 NLPSRFNAFYVNSHSEKCHPV---MIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIV 557
               R+  + +   +     +   M+   +        G + +         L+P++A V
Sbjct: 310 EAGERWTPYVIEPAAGVGRAMLAFMLDAYIEDEAPNAKGKLEKRTVMRFDPRLAPVKAAV 369

Query: 558 TTIT--SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEAS 615
             ++        A+ +A  L+ H  +IE D     I  + R       P  +        
Sbjct: 370 LPLSRNPELSPKAKGLAAALRQH-WNIEFDDAGA-IGRRYRRQDEIGTPFCVTVDFDTLD 427

Query: 616 ERSIGIRRFGSTTTQKVSLLD 636
           + ++ +R   +   ++VSL  
Sbjct: 428 DNAVTVRERDTMKQERVSLDQ 448


>gi|229820268|ref|YP_002881794.1| glycyl-tRNA synthetase [Beutenbergia cavernae DSM 12333]
 gi|229566181|gb|ACQ80032.1| glycyl-tRNA synthetase [Beutenbergia cavernae DSM 12333]
          Length = 462

 Score = 75.2 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 55/389 (14%), Positives = 117/389 (30%), Gaps = 57/389 (14%)

Query: 277 QTLISYMRRKIKD---DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
             +  +  RK +       EI  P    +  W +         NM           +   
Sbjct: 104 HLIEEFEERKGRAPEGGLAEIACPNCGTRGQWTEPR-----DFNMMLKTYLGPVEDESGL 158

Query: 334 FALKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
             L+P    G    F +    + ++ P  +A+ G  +RNE +   + + R R F Q +  
Sbjct: 159 HYLRPETAQGIFVNFANVMGAARKKPPFGIAQIGKSFRNEITPG-NFIFRTREFEQMEME 217

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
            F              +     Y D G ++  ++L   P          +   +     +
Sbjct: 218 YFVEPGSDEQWHQYWIDARTDWYVDLGIDRDNLRLYEHPA---------EKLSHYSTRTV 268

Query: 453 DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
           D            G L G       + ++ LK                    R  +++  
Sbjct: 269 DIEYRFGFTGSEWGELEGIAN----RTDFDLKTHSEHSG-------------RDLSYFDQ 311

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW----------------LSPIQAI 556
             +E+  P +I     G     +  ++E +  +                    L+P++  
Sbjct: 312 GKNERWVPYVIE-PAAGLTRSLMAFLVEAYAEDEAPNTKGGVDVRTVLRLDHRLAPVKVA 370

Query: 557 VTTITS--SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
           V  ++        A+ +A  L+    +++ D     I  + R       P  +       
Sbjct: 371 VLPLSRSGDLSPKARGLAAELRQA-WNVDFDDAGA-IGRRYRRQDEIGTPFCVTVDFDTL 428

Query: 615 SERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           ++ ++ +R   S   ++V+L      L +
Sbjct: 429 TDDAVTVRHRDSMQQERVALSKVRGYLAE 457


>gi|15678272|ref|NP_275387.1| histidyl-tRNA synthetase [Methanothermobacter thermautotrophicus
           str. Delta H]
 gi|2621293|gb|AAB84750.1| histidyl-tRNA synthetase [Methanothermobacter thermautotrophicus
           str. Delta H]
          Length = 444

 Score = 75.2 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 65/436 (14%), Positives = 131/436 (30%), Gaps = 96/436 (22%)

Query: 273 WKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
            +  + +   +RR  +   Y EI TP   +  L+                +    T K  
Sbjct: 36  MRNRKEVEGVLRRTFETYGYHEIKTPIFEELKLFTVKS------GEEVVNQIYHFTDKGG 89

Query: 332 RTFALKP-MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
           R  AL+P +  P      N   K  +  P+++  FGS +R E   +     R R F Q  
Sbjct: 90  RELALRPELTAPVARLYMNEMQKKPK--PIKMYYFGSCFRYERPQA----GRFRQFWQFG 143

Query: 391 AHVF------CTKEQMFNECLKIHNLIISIYK-----------DFGFEKIMVKLSTRPEK 433
             +          E +      +H L +  ++             G E+I  +L  R   
Sbjct: 144 CELIGGRSPLAEAEVISLASESLHELGLDGFEVHIGHLGILRGILGREEIPSELQDRIMG 203

Query: 434 RV--------------------------------GSDALWDDAENIMKGVLDTIKNSSQD 461
            +                                G   + DD E  + G  ++++   + 
Sbjct: 204 VIDKGDVEELEALLGEVEVSGESRELLMKLIGTQGGPEVLDDVEEYLGGYSESLEALEEF 263

Query: 462 R---------------INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF 506
           R               +N G+  G   + G  FE  + +   +   CG     +NL   F
Sbjct: 264 RELVETLHYFGVDDYHVNLGIARGLDYYTGIVFEIYVPELGAQKQICGG--GTYNLVETF 321

Query: 507 NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVE 566
               V S                  +R +  +  + +         +   V  I  S V 
Sbjct: 322 GGERVESTGFA-----------FGFDRLMNALGMDEENMRM-----VDVFVIPIQDSTVP 365

Query: 567 YAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS 626
            A  I   L++  +S + +     +   +           ++ G++E  +  + ++    
Sbjct: 366 EAIRITQELRAAGVSADLEVSGRKLRKALSHADNLGARFAVLTGEREIQDGKVTVKDMER 425

Query: 627 TTTQKVSLLDAIPILT 642
            + + +   + +  + 
Sbjct: 426 NSQETLPRDEMVDKIK 441


>gi|115305794|sp|Q7UEU9|SYG_RHOBA RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
          Length = 536

 Score = 75.2 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 56/352 (15%), Positives = 110/352 (31%), Gaps = 37/352 (10%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR-ELPVRLAEFGSVYRNEPS 374
            N+           +  T  L+P    G    F + + S R  +P  + + G  +RNE +
Sbjct: 190 FNLMFKTTLGALGGEEDTTFLRPETAQGIFVNFKNVVDSSRVRIPFGIGQVGKSFRNEIT 249

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              +   R R F Q +   FC   Q         +  ++ Y   G     + +     + 
Sbjct: 250 PR-NFTFRSREFEQMEIEFFCHPNQSQEWYRYWRDRRMAWYTKLGLSNESLIMREHHTE- 307

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
                  + A   +                 G L G            ++  +       
Sbjct: 308 -------ELAHYSVGTADIEYAFPFLPEGEYGELEGIAHRGDFDLRSHMEGKLDPATNPM 360

Query: 495 TIQVDFNLPSRFN------AFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK----- 543
           T++++ +   +        A+  +  +EK  P +I     G+    +  + E +      
Sbjct: 361 TVELNEHGKPKHRGSGKDLAYRDDITNEKFVPHVIE-PSAGADRAALAFLCEAYTEDEAP 419

Query: 544 -----------GNLPLWLSPIQAIV--TTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
                        L   L+PI+A V          E AQEI   LK H  ++  D +   
Sbjct: 420 DENGKMQTRTVMKLDPRLAPIKAAVFPLVKKDGMPEVAQEIYGALKEH-YNVFYDAKGA- 477

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +  + R       P  I       +++++ IR   +    +V + D +  + 
Sbjct: 478 VGRRYRRQDEAGTPYCITVDGDSLTDKTVTIRDRDTLEQTRVKIDDVVSEIQ 529


>gi|88855020|ref|ZP_01129685.1| glycyl-tRNA synthetase [marine actinobacterium PHSC20C1]
 gi|88815548|gb|EAR25405.1| glycyl-tRNA synthetase [marine actinobacterium PHSC20C1]
          Length = 461

 Score = 75.2 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 44/338 (13%), Positives = 103/338 (30%), Gaps = 49/338 (14%)

Query: 328 IKDLRTFALKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
             +     L+P    G    F +    +  + P  + + G  +RNE +   + + R R F
Sbjct: 152 DNEEGMHYLRPETAQGIFTNFANVMGAARMKPPFGIGQVGKSFRNEITPG-NFIFRTREF 210

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
            Q +   F              +  +  Y D G +   ++     +         +   +
Sbjct: 211 EQMEMEFFVEPGTDEEWHQYWIDESMKWYTDLGIKPENLRFYEHAQ---------EKLSH 261

Query: 447 IMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF 506
             K  +D            G L+G       + ++ L+     +     +          
Sbjct: 262 YSKRTVDVEYRFRFAGSEWGELMGIAN----RTDFDLRTHS--EASGADLSYFDQ----- 310

Query: 507 NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW----------------L 550
                 +  E+  P +I    FG     +  +I+ +  +                    L
Sbjct: 311 ------AKDERWTPYVIE-PAFGLTRALMAFLIDAYAEDEAPNAKGGVDKRTVLRLDRRL 363

Query: 551 SPIQAIVTTIT--SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIII 608
           SP++  V  ++        A+ +A  L+    +++ D     I  + R       P  + 
Sbjct: 364 SPVKVAVLPLSRNERLSPLARSVAADLRKF-WNVDFDDAGA-IGRRYRRQDEIGTPFCVT 421

Query: 609 CGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
                  + ++ +R   +   +++ L +    L +E +
Sbjct: 422 IDFDSLDDNAVTVRERDTMEQKRMPLEELRGYLAQELI 459


>gi|195977559|ref|YP_002122803.1| seryl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
 gi|238689799|sp|B4U1C3|SYS_STREM RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|195974264|gb|ACG61790.1| seryl-tRNA synthetase SerS [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
          Length = 425

 Score = 75.2 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 38/243 (15%), Positives = 86/243 (35%), Gaps = 21/243 (8%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIF 276
           G       E+ ++    +   + + H  L   +D+          G+  +F+   G ++ 
Sbjct: 115 GADEEDNVEIRRWGKPRQFDFDIKAHWDLGEALDILDWERGAKVTGARFLFYKNLGARLE 174

Query: 277 QTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFA 335
           + L ++M    +K+ Y+EI  P +++      +G +  ++ + F +        D   F 
Sbjct: 175 RALYNFMLDEHLKEGYQEIIPPYMVNHDSMFGTGQYPKFKEDTFEL--------DGTNFV 226

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAH 392
           L P         +   +   +ELP+        +R+E   +     GL+R+  F + +  
Sbjct: 227 LIPTAEVPLTNYYRGDIIDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMV 286

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKI----MVKLSTRPEKRVGSDALWDDAENIM 448
            F   E  ++E  K+      I +                     +     +W  A+N  
Sbjct: 287 KFAKPETSYDELEKMTANAEHILQKLKLPYRVLALCTGDMGFSAAKTYDLEVWIPAQNTY 346

Query: 449 KGV 451
           + +
Sbjct: 347 REI 349


>gi|320160257|ref|YP_004173481.1| putative prolyl-tRNA synthetase [Anaerolinea thermophila UNI-1]
 gi|319994110|dbj|BAJ62881.1| putative prolyl-tRNA synthetase [Anaerolinea thermophila UNI-1]
          Length = 545

 Score = 75.2 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 27/162 (16%), Positives = 56/162 (34%), Gaps = 8/162 (4%)

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPL 548
           R           +   R         + +  PV +      ++ R    + E    N  L
Sbjct: 379 RGLTVARSIRFSSDFIRDRGLNYFDENGQSRPVWMEIHTL-NLTRTFACLAELRHDNYGL 437

Query: 549 WLSP------IQAIVTTITSSAVEYAQ-EIANLLKSHHLSIETDFRNETINYKIREHSIK 601
            L P      +  +V     + V  A  E+   L+  +L +  D R+E+   K  +  + 
Sbjct: 438 ILPPQASPFEVHLVVLPGKENGVASALPEVLKQLEQMNLDVLVDDRSESPGVKFNDADLI 497

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +P+ +   ++   +  I +R+   +  Q + L D    + K
Sbjct: 498 GVPVRLTLSERSLQQGGIEVRKRWESERQTIPLEDLSDWIRK 539


>gi|212715520|ref|ZP_03323648.1| hypothetical protein BIFCAT_00418 [Bifidobacterium catenulatum DSM
           16992]
 gi|212660887|gb|EEB21462.1| hypothetical protein BIFCAT_00418 [Bifidobacterium catenulatum DSM
           16992]
          Length = 491

 Score = 75.2 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 57/379 (15%), Positives = 111/379 (29%), Gaps = 48/379 (12%)

Query: 278 TLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALK 337
            L      K  D   E     ++      +    +    NM           +     L+
Sbjct: 102 KLEESYAEKHGDKLPENGLKDIVCPDCGTRGNWTEPRDFNMMLRTHLGPVEDENSLHYLR 161

Query: 338 PMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT 396
           P    G    F +    S  + P  +A  G  +RNE +   + + R R F Q +   F  
Sbjct: 162 PETAQGIFVDFKNVMTSSRSKPPFGIANMGKSFRNEITPG-NFIFRTREFEQMEMEFFVA 220

Query: 397 KEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIK 456
                       +     Y D G +   ++    P+         +   +  K  +D   
Sbjct: 221 PGTDEEWHQYWIDARTQWYIDLGVKPENLRHYEHPK---------EKLAHYSKRTVDIEY 271

Query: 457 NSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE 516
                  + G L G            + +    D          +L      ++  +  E
Sbjct: 272 KFGFQGSDWGELEG------------VANRTDFDLSAHAKHSGEDLS-----YFNQATGE 314

Query: 517 KCHPVMIHRAVFGSIERFIGIMIENFK----------------GNLPLWLSPIQAIVTTI 560
           K  P +I     G     +  +++ +                   L   L+P++A V  +
Sbjct: 315 KYVPYVIE-PAAGLTRSLMAFLVDAYDVDEAPNTKGGVDKRTVLRLDPRLAPVKAAVLPL 373

Query: 561 TSSAV--EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERS 618
           +        A ++A  L+ H   I+ D     I  + R       P+ I        +++
Sbjct: 374 SKKPELQTVAHDLAADLRQHDWMIDYDEAGA-IGRRYRREDEIGTPLCITVDFDTLDDQA 432

Query: 619 IGIRRFGSTTTQKVSLLDA 637
           + IR   +   ++V+L   
Sbjct: 433 VTIRERDTMQQERVALDKV 451


>gi|225351462|ref|ZP_03742485.1| hypothetical protein BIFPSEUDO_03057 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225157806|gb|EEG71089.1| hypothetical protein BIFPSEUDO_03057 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 491

 Score = 75.2 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 57/379 (15%), Positives = 111/379 (29%), Gaps = 48/379 (12%)

Query: 278 TLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALK 337
            L      K  D   E     ++      +    +    NM           +     L+
Sbjct: 102 KLEESYAEKHGDKLPENGLKDIVCPDCGTRGNWTEPRDFNMMLRTHLGPVEDENSLHYLR 161

Query: 338 PMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT 396
           P    G    F +    S  + P  +A  G  +RNE +   + + R R F Q +   F  
Sbjct: 162 PETAQGIFVDFKNVMTSSRSKPPFGIANMGKSFRNEITPG-NFIFRTREFEQMEMEFFVA 220

Query: 397 KEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIK 456
                       +     Y D G +   ++    P+         +   +  K  +D   
Sbjct: 221 PGTDEEWHQYWIDARTQWYIDLGVKPENLRHYEHPK---------EKLAHYSKRTVDIEY 271

Query: 457 NSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE 516
                  + G L G            + +    D          +L      ++  +  E
Sbjct: 272 KFGFQGSDWGELEG------------VANRTDFDLSAHAKHSGEDLS-----YFNQATGE 314

Query: 517 KCHPVMIHRAVFGSIERFIGIMIENFK----------------GNLPLWLSPIQAIVTTI 560
           K  P +I     G     +  +++ +                   L   L+P++A V  +
Sbjct: 315 KYVPYVIE-PAAGLTRSLMAFLVDAYDVDEAPNTKGGVDKRTVLRLDPRLAPVKAAVLPL 373

Query: 561 TSSAV--EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERS 618
           +        A ++A  L+ H   I+ D     I  + R       P+ I        +++
Sbjct: 374 SKKPELQTVAHDLAADLRQHDWMIDYDEAGA-IGRRYRREDEIGTPLCITVDFDTLDDQA 432

Query: 619 IGIRRFGSTTTQKVSLLDA 637
           + IR   +   ++V+L   
Sbjct: 433 VTIRERDTMQQERVALDKV 451


>gi|54309340|ref|YP_130360.1| hypothetical protein PBPRA2160 [Photobacterium profundum SS9]
 gi|46913776|emb|CAG20558.1| hypothetical protein PBPRA2160 [Photobacterium profundum SS9]
          Length = 79

 Score = 74.8 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 45/72 (62%), Positives = 56/72 (77%)

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +AEFG+ +RNEPSG+LHGLMRVRGFTQDDAHVFCT+ Q+  E      ++   Y+ FGF+
Sbjct: 7   MAEFGACHRNEPSGALHGLMRVRGFTQDDAHVFCTENQVQQEVTSCIKMVYDTYQTFGFD 66

Query: 422 KIMVKLSTRPEK 433
            I+VKLSTRPE 
Sbjct: 67  NIVVKLSTRPEN 78


>gi|33635224|emb|CAE21549.1| putative seryl-tRNA synthetase [Prochlorococcus marinus str. MIT
           9313]
          Length = 429

 Score = 74.8 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 53/349 (15%), Positives = 106/349 (30%), Gaps = 63/349 (18%)

Query: 220 IYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED----GSGVIFWHRKGWKI 275
             G   N  QE  ++    E  +  +H  +A  + LF          S  +    +G ++
Sbjct: 121 PEGRDENDNQERHRWGKPREGKDLLEHWSIAERLKLFETERSVRIAQSRFVTLMGQGARL 180

Query: 276 FQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
            + LI++M        Y E+  P +++      SG    +    F     D         
Sbjct: 181 ERALINFMLDLHTSKGYREVMPPVLVNTASLTGSGQLPKFAEESFRCAEDD--------L 232

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDA 391
            L P       ++    +    +LP+R A +   +R E         GL+R+  F + + 
Sbjct: 233 WLTPTAEVPVTSLHRDEIIPAEQLPLRYAAYSPCFRREAGSYGRDTRGLIRLHQFNKVEL 292

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP----EKRVGSDALWDDAENI 447
           + F   +       +I     ++ +       +++L T        R     +W      
Sbjct: 293 YWFVHPDHSQAAHAQITADAEAVLQALELPYRVIELCTGDLGFSSSRTYDLEVW------ 346

Query: 448 MKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFN 507
                               L G GAF              R+    +I  DF    R  
Sbjct: 347 --------------------LPGAGAF--------------REISSCSICGDFQ-ARRSA 371

Query: 508 AFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI 556
               +    +    +    +  ++ R +  ++E  + +    L P   +
Sbjct: 372 IRTKDEKGTRLIHTLNGSGL--AVGRTMAALLETGQQSDGSVLLPKALV 418


>gi|161350042|ref|NP_895201.2| seryl-tRNA synthetase [Prochlorococcus marinus str. MIT 9313]
 gi|46577198|sp|Q7V608|SYS_PROMM RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
          Length = 425

 Score = 74.8 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 53/349 (15%), Positives = 106/349 (30%), Gaps = 63/349 (18%)

Query: 220 IYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED----GSGVIFWHRKGWKI 275
             G   N  QE  ++    E  +  +H  +A  + LF          S  +    +G ++
Sbjct: 117 PEGRDENDNQERHRWGKPREGKDLLEHWSIAERLKLFETERSVRIAQSRFVTLMGQGARL 176

Query: 276 FQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
            + LI++M        Y E+  P +++      SG    +    F     D         
Sbjct: 177 ERALINFMLDLHTSKGYREVMPPVLVNTASLTGSGQLPKFAEESFRCAEDD--------L 228

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDA 391
            L P       ++    +    +LP+R A +   +R E         GL+R+  F + + 
Sbjct: 229 WLTPTAEVPVTSLHRDEIIPAEQLPLRYAAYSPCFRREAGSYGRDTRGLIRLHQFNKVEL 288

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP----EKRVGSDALWDDAENI 447
           + F   +       +I     ++ +       +++L T        R     +W      
Sbjct: 289 YWFVHPDHSQAAHAQITADAEAVLQALELPYRVIELCTGDLGFSSSRTYDLEVW------ 342

Query: 448 MKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFN 507
                               L G GAF              R+    +I  DF    R  
Sbjct: 343 --------------------LPGAGAF--------------REISSCSICGDFQ-ARRSA 367

Query: 508 AFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI 556
               +    +    +    +  ++ R +  ++E  + +    L P   +
Sbjct: 368 IRTKDEKGTRLIHTLNGSGL--AVGRTMAALLETGQQSDGSVLLPKALV 414


>gi|82753710|ref|XP_727786.1| prolyl-tRNA synthetase [Plasmodium yoelii yoelii str. 17XNL]
 gi|23483805|gb|EAA19351.1| prolyl-tRNA synthetase-related [Plasmodium yoelii yoelii]
          Length = 583

 Score = 74.8 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 57/416 (13%), Positives = 123/416 (29%), Gaps = 72/416 (17%)

Query: 187 HVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDH 246
            V +    K         G +W+  SN+    R              +   ++++  +  
Sbjct: 80  MVENGSDNKIDDDGDDEDGEHWKCRSNQVKCFRNKSYEGTKYIFNKIFNDNIKQNGDKAS 139

Query: 247 RKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLW 305
             L R   +  I    +G+      G ++   +  ++   ++  +   +    +  + LW
Sbjct: 140 ELLFRANYIKEI----NGLYNMLPLGMRVINKIKDFINNYLEKINSHSVFLSILQPKRLW 195

Query: 306 QQSGHWDSYRANMFAVKCADDTIKD------------LRTFALKPMNCPGHVAVFNHGLK 353
             S     Y      V        D                 L P      + + N    
Sbjct: 196 NISDRSKLYSEEFLYVYKQKQQKVDTDLGEIIKKKYEDDGNILSPTCEEIALTLINEVYN 255

Query: 354 ---SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
              + +  P+ + ++   +RNE       L + + F   D + F   ++  +E  +I+  
Sbjct: 256 LNATEKNFPLLIHQYNYKFRNEKRLE-KSLFKSKEFLMKDGYSFHANKKCMDEIYEIYKE 314

Query: 411 IIS-IYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL 469
               I+   G    ++K   + +                   L++               
Sbjct: 315 CYKNIFNKLGLTYRIIKKRKKDKM----------------NALESH-------------- 344

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
                     EY +    G+  +   I  +      + N  Y+N  +EK +  M    + 
Sbjct: 345 ----------EYQILCRDGKFKEGAHIFKLGDYYSKKLNINYLNKKNEKKNIYMGSYGI- 393

Query: 529 GSIERFIGIMIENF----KGNLPLWLSPIQAIVTTITSS---AVEYAQEIANLLKS 577
             I R +  +I+NF       LP  ++P    +         + E   +I N L+ 
Sbjct: 394 -GINRLLYFLIDNFYDENGIKLPNQIAPFSIYLIQTNQKSKYSSEKVNKIVNELRK 448


>gi|153877657|ref|ZP_02004322.1| Prolyl-tRNA synthetase [Beggiatoa sp. PS]
 gi|152065879|gb|EDN65678.1| Prolyl-tRNA synthetase [Beggiatoa sp. PS]
          Length = 183

 Score = 74.8 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 62/169 (36%), Gaps = 13/169 (7%)

Query: 486 AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIE-NF 542
           AI R  + G I Q+         A  ++   +    V++    +G  + R +   IE N 
Sbjct: 15  AIARGIEVGHIFQLGQKYSQAMQANVLDEQGKS---VILTMGCYGIGVSRLVAAAIEQNH 71

Query: 543 KGNLPLWL---SPIQAIVTTIT----SSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
             +  +W    +P   I+  ++        E A+ + N L+S  + +  D R E      
Sbjct: 72  DEHGIIWPQSIAPFSVILLPMSMHKSQRLREAAEAMYNQLQSAGIDVLFDDRRERAGVMF 131

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
               +  IP  ++ G+    +  I  +         + + +A+  +  +
Sbjct: 132 ANADLIGIPHRLVIGESGLDKGEIEYKGRRDQKAHSIPMAEAVSFIQTQ 180


>gi|124022316|ref|YP_001016623.1| seryl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303]
 gi|166222762|sp|A2C798|SYS_PROM3 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|123962602|gb|ABM77358.1| Seryl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303]
          Length = 425

 Score = 74.8 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 53/349 (15%), Positives = 106/349 (30%), Gaps = 63/349 (18%)

Query: 220 IYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED----GSGVIFWHRKGWKI 275
             G   N  QE   +    E  +  +H  +A  ++LF          S  +    +G ++
Sbjct: 117 PEGRDENDNQERHCWGKPREGKDLLEHWSIAERLNLFETERSVRIAQSRFVTLMGQGARL 176

Query: 276 FQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
            + LI++M        Y E+  P +++      SG    +    F     D         
Sbjct: 177 ERALINFMLDLHTSKGYREVMPPVLVNTASLTGSGQLPKFAEESFRCAEDD--------L 228

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDA 391
            L P       ++    +    +LP+R A +   +R E         GL+R+  F + + 
Sbjct: 229 WLTPTAEVPVTSLHRDEIIPADQLPLRYAAYSPCFRREAGSYGRDTRGLIRLHQFNKVEL 288

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP----EKRVGSDALWDDAENI 447
           + F   +       +I     ++ +       +++L T        R     +W      
Sbjct: 289 YWFVHPDHSQAAHAQITADAEAVLQALELPYRVIELCTGDLGFSSSRTYDLEVW------ 342

Query: 448 MKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFN 507
                               L G GAF              R+    +I  DF    R  
Sbjct: 343 --------------------LPGAGAF--------------REISSCSICGDFQ-ARRSA 367

Query: 508 AFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI 556
               +    +    +    +  ++ R +  ++E  + +    L P   +
Sbjct: 368 IRTKDQKGTRLIHTLNGSGL--AVGRTMAALLETGQQSDGSVLLPKALV 414


>gi|269127431|ref|YP_003300801.1| glycyl-tRNA synthetase [Thermomonospora curvata DSM 43183]
 gi|268312389|gb|ACY98763.1| glycyl-tRNA synthetase [Thermomonospora curvata DSM 43183]
          Length = 462

 Score = 74.8 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 52/316 (16%), Positives = 105/316 (33%), Gaps = 23/316 (7%)

Query: 335 ALKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
            L+P    G    F +    S R++P  + + G  +RNE +   + + R R F Q +   
Sbjct: 160 YLRPETAQGIFINFMNVQQSSRRKIPFGIGQIGKSFRNEITPG-NFIFRTREFEQMEMEF 218

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
           F              +  +  Y D G  K  ++L   P          +   +  K  +D
Sbjct: 219 FVEPGTDEEWHQYWIDQRLQWYVDLGIRKENLRLYEHPA---------EKLSHYSKRTVD 269

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS 513
                       G L G       + ++ L        Q  +   D     R+  + +  
Sbjct: 270 IEYRFDFVGAEWGELEGIAN----RTDFDLSTHAKASGQDLS-YFDQEKGERYIPYVIEP 324

Query: 514 HSEKCHPVM---IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAV--EYA 568
            +     V+   +            G + +     L   L+P++A V  ++ +A     A
Sbjct: 325 AAGVDRCVLTFLLDAYAEDEAPNAKGKLEKRTVLRLDPRLAPVKAAVLPLSRNADLSPKA 384

Query: 569 QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
           +++A  L+ H  ++E D     I  + R       P  I        + ++ +R   S  
Sbjct: 385 RDLAARLRKH-WNVEFDDAGA-IGRRYRRQDEIGTPFCITVDFDTLEDDAVTVRERDSMK 442

Query: 629 TQKVSLLDAIPILTKE 644
            +++++      L  +
Sbjct: 443 QERIAISQVESFLAAQ 458


>gi|297626120|ref|YP_003687883.1| glycyl-tRNA synthetase (glycine--tRNA ligase) (GlyRS)
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
 gi|296921885|emb|CBL56445.1| Glycyl-tRNA synthetase (Glycine--tRNA ligase) (GlyRS)
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
          Length = 462

 Score = 74.8 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 58/382 (15%), Positives = 116/382 (30%), Gaps = 49/382 (12%)

Query: 280 ISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPM 339
             Y  RK   D + +    +   +   +    +    NM           +     L+P 
Sbjct: 105 EEYAFRKGIADADTVKLEDIPCPNCGVRGKFTEPRDFNMMLETYLGPIHDEAGLHYLRPE 164

Query: 340 NCPGHVAVFNHGLKSYR-ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKE 398
              G    F + L S R + P  + + G  +RNE +   + + R R F Q +   F    
Sbjct: 165 TAQGIFINFKNVLTSTRMKPPFGVGQTGKSFRNEITPG-NFIFRTREFEQMEMEFFVEPG 223

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNS 458
                     +   + Y   G E+  ++L   P+         +   +  K  +D     
Sbjct: 224 TDEEWHQYWIDHRKAWYVGLGIEEDNLRLFEHPK---------EKLSHYSKRTVDIEYKF 274

Query: 459 SQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC 518
                + G L G       + ++ LK                      +  Y +    K 
Sbjct: 275 GFAGSDWGELEGIAN----RTDFDLKTHTEHSGT--------------DLSYFDQAQNKH 316

Query: 519 HPVMIHRAVFGSIERFIGIM----IENFKGN------------LPLWLSPIQAIVTTIT- 561
           +   +     G    F+  M     E+   N            +   L+P++  V  ++ 
Sbjct: 317 YIPYVIEPAAGLTRSFMAFMVDAYTEDEAPNAKGGVDKRTVLKIDPRLAPVKVAVLPLSR 376

Query: 562 -SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
                  A+ +A+ L+ +  +++ D     I  + R       P  +        + ++ 
Sbjct: 377 NEKLSPKARGLADELRQY-WNVDFDDAQA-IGKRYRRQDEIGTPYCVTIDFDTLDDDAVT 434

Query: 621 IRRFGSTTTQKVSLLDAIPILT 642
           IR   S   ++V L      L+
Sbjct: 435 IRERDSMAQERVPLSGVSEYLS 456


>gi|119719206|ref|YP_919701.1| glycyl-tRNA synthetase [Thermofilum pendens Hrk 5]
 gi|119524326|gb|ABL77698.1| glycyl-tRNA synthetase [Thermofilum pendens Hrk 5]
          Length = 497

 Score = 74.8 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 57/353 (16%), Positives = 118/353 (33%), Gaps = 40/353 (11%)

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY-RELPVRLAEFGSVYRNEPSGSLHG 379
           +       +   T  L+P         F + + +    LP  +A+ G  +RNE S   + 
Sbjct: 150 MFDTQVGPRKSMTAYLRPETAQLIFTNFKNVVFTMGATLPFGIAQIGKAFRNEISPR-NF 208

Query: 380 LMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDA 439
           L R+R FTQ +   F   E++               ++     +  +   R      S  
Sbjct: 209 LFRLREFTQMEIEYFVNPEKLNE------CPYFKEVEELRVNFLSAEEQERGVSEAKSIK 262

Query: 440 LWDDAEN-IMKGV--LDTIKNSSQDRINTGVLLG----------EGAFYGPK---FEYIL 483
           L +  E  ++K       I  S +   + G+             E A Y  +    EY  
Sbjct: 263 LGEAVETGVIKNAWHAYWIGESLRWLWSLGLRPERLRVREHVKTELAHYAVQTFDIEYFF 322

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFN----AFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
                ++ +    + D++L         A ++  + +   P +I    FG     + ++ 
Sbjct: 323 PYMGWKEIEGIANRSDYDLKRHQEYSGEALHIVDNGKTVIPYVIE-PSFGLERILLAVLT 381

Query: 540 ENF-------KGNLPLWLSPIQAIV--TTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
           +++          L   ++P +  V            A+EI N LK H      D  + +
Sbjct: 382 DSYVREERRTYLRLKPRIAPFKCAVFPLVKRDGLDVKAREIYNQLKKH-FRCYYDE-DGS 439

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           I  +  +     +P  I    +   + ++ IR   +    +  + +    L++
Sbjct: 440 IGRRYAKADEIGVPFSITIDGQTLRDDTVTIRFRDTKEQIRERVENLKARLSE 492


>gi|197124169|ref|YP_002136120.1| cyclic nucleotide-binding protein [Anaeromyxobacter sp. K]
 gi|196174018|gb|ACG74991.1| cyclic nucleotide-binding protein [Anaeromyxobacter sp. K]
          Length = 715

 Score = 74.8 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 45/194 (23%), Positives = 79/194 (40%), Gaps = 11/194 (5%)

Query: 12  GSIKNFPVHATGSDVA-ESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRS 69
           G  +         D+  E+I   L    VA  +  K   L+ PV  + ++  +T      
Sbjct: 169 GEARRIRTGTRVRDLLPEAIEGDL---VVAGLLGQKPVSLATPVFTDTTVAPLTVSHWEG 225

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK---M 126
             V  HS   ++ EA   + P ++V +GP +  G       E     D  A   +    M
Sbjct: 226 RQVYAHSLGLVLLEAAHQVAPALRVRMGPSL--GVRQLVMVEGAGGEDRAALAARLAAGM 283

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGP 186
           + I+A D+PF  +Y S ++A+  F  +  +    +L  +  +  V L   G+ + L  GP
Sbjct: 284 ERIVAADAPFRSEYWSTDEAQGWFLERGWSDAARLL-RVRRQATVRLVSCGDVYALSMGP 342

Query: 187 HVRSTGQVKKFFKL 200
            + STG +  +   
Sbjct: 343 LLPSTGALHGWTLE 356


>gi|317497358|ref|ZP_07955681.1| alanyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
 gi|316895427|gb|EFV17586.1| alanyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 765

 Score = 74.8 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 39/155 (25%), Positives = 72/155 (46%), Gaps = 11/155 (7%)

Query: 45  GKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDG 103
           G V + +  V + ++     E  R+L    HS  H++ +A++ +        G     + 
Sbjct: 423 GHVVEGTFNVGDKAV-FTVNEKNRALGAKNHSATHLLQKALREVLGTHVEQAGSLNNAEH 481

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE 163
             +DF    P S DE+A++EK + E IA+D P + + +S E+A++         K     
Sbjct: 482 LRFDFTHFSPLSDDEIARVEKIVNEKIAQDLPVVTKVMSMEEAKKTGAMALFGEKY---- 537

Query: 164 SIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
                + V +   G++  +LC G HV++TG +  F
Sbjct: 538 ----GDEVRVVSMGDFSVELCGGTHVKNTGAITAF 568


>gi|315652484|ref|ZP_07905469.1| glycyl-tRNA synthetase beta subunit [Eubacterium saburreum DSM
           3986]
 gi|315485273|gb|EFU75670.1| glycyl-tRNA synthetase beta subunit [Eubacterium saburreum DSM
           3986]
          Length = 462

 Score = 74.8 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 45/325 (13%), Positives = 98/325 (30%), Gaps = 26/325 (8%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    F +  + S +++P  + + G  +RNE +
Sbjct: 151 FNLMFKTFQGVTEDAKNVVYLRPETAQGIFVNFKNVQRTSRKKVPFGIGQVGKSFRNEIT 210

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              +   R R F Q +   FC             +      K  G ++  ++L    ++ 
Sbjct: 211 PG-NFTFRTREFEQMELEFFCKPGSDLEWFDYWRSFCRDWLKALGIKEEQMRLRDHDKEE 269

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           +   + + +A   +                 G+            +    D        G
Sbjct: 270 L---SFYSNATTDI-----EFLFPFGWGELWGIA-----------DRTDYDLNRHQEVSG 310

Query: 495 T--IQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
                 D     R+  + +         V +        E  +         +    L+P
Sbjct: 311 QDLSYFDDETSERYIPYVIEPSLGADR-VTLAFLCAAYDEEILEGGETRTVLHFHPALAP 369

Query: 553 IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
           ++  +  ++    E A +I+  L  +  ++E D R   I  + R       P  I     
Sbjct: 370 VKIGILPLSKKLNEGALKISEELSKY-YNVEFDDRGN-IGKRYRRQDEIGTPFCITYDFD 427

Query: 613 EASERSIGIRRFGSTTTQKVSLLDA 637
             S+ ++ +R   S    ++ + + 
Sbjct: 428 SESDHAVTVRDRDSMEQVRIPIAEL 452


>gi|225869921|ref|YP_002745868.1| seryl-tRNA synthetase [Streptococcus equi subsp. equi 4047]
 gi|254783047|sp|C0M858|SYS_STRE4 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|225699325|emb|CAW92703.1| seryl-tRNA synthetase [Streptococcus equi subsp. equi 4047]
          Length = 425

 Score = 74.8 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 38/243 (15%), Positives = 85/243 (34%), Gaps = 21/243 (8%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIF 276
           G       E+ ++    +   + + H  L   +D+          G+  +F+   G ++ 
Sbjct: 115 GADEEDNVEIHRWGKPRQFDFDIKAHWDLGEALDILDWERGAKVTGARFLFYKNLGARLE 174

Query: 277 QTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFA 335
           + L ++M    +K+ Y+EI  P +++      +G +  ++ + F +        D   F 
Sbjct: 175 RALYNFMLDEHLKEGYQEIIPPYMVNHDSMFGTGQYPKFKEDTFEL--------DGTNFV 226

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAH 392
           L P         +   +   +ELP+        +R+E   +     GL+R+  F + +  
Sbjct: 227 LIPTAEVPLTNYYRGDIIDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMV 286

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKI----MVKLSTRPEKRVGSDALWDDAENIM 448
            F   E  + E  K+      I +                     +     +W  A+N  
Sbjct: 287 KFAKPETSYEELEKMTANAEHILQKLKLPYRVLALCTGDMGFSAAKTYDLEVWIPAQNTY 346

Query: 449 KGV 451
           + +
Sbjct: 347 REI 349


>gi|315225631|ref|ZP_07867440.1| glycyl-tRNA synthetase beta subunit [Capnocytophaga ochracea F0287]
 gi|314944448|gb|EFS96488.1| glycyl-tRNA synthetase beta subunit [Capnocytophaga ochracea F0287]
          Length = 516

 Score = 74.8 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 59/392 (15%), Positives = 124/392 (31%), Gaps = 56/392 (14%)

Query: 271 KGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRA-NMFAVKCADDTIK 329
           +G +I   L   + ++   D  +    ++        S +W   +  N+        +  
Sbjct: 150 RGEEILHRLGKSLEKEDLAD-VKALIEELEIADPETGSRNWTDVKQFNLMFGTKIGASAD 208

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQ 388
                 L+P    G    F +  KS   ++P  +A+ G  +RNE   +   + R+R F Q
Sbjct: 209 ASMDLYLRPETAQGIFVNFLNVQKSGRMKIPFGIAQTGKAFRNEIV-ARQFIFRMREFEQ 267

Query: 389 DDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
            +   F     +Q + E  K   L   +    G E        +                
Sbjct: 268 MEMQFFIKPGTQQQWYEYWKETRLKWHLSLGMGEENYRYHPHEKLAHYAD---------- 317

Query: 447 IMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF 506
                 D      + R   G    EG      F+          +    +Q         
Sbjct: 318 ---AACDI-----EFRFPFGFKELEGIHSRTNFDL----GNHEKYSGKKMQYFD------ 359

Query: 507 NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI-----ENFKG-------NLPLWLSPIQ 554
                   ++   P ++  ++ G    F+ +       E  +G        LP  L+P +
Sbjct: 360 -----PEENKSYTPYVLETSI-GLDRMFLAVFSNSLQEEALEGGDTRTVLRLPFVLAPTK 413

Query: 555 AIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
             V  +       E A++I N LK +  ++  D ++  +  + R       P  +    +
Sbjct: 414 VAVLPLLKKDGLPEVAEQIVNELK-YDFNVAYDEKDA-VGRRYRRQDAVGTPFCVTVDHQ 471

Query: 613 EASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
              + ++ +R   +    ++++ +    + KE
Sbjct: 472 TLEDNTVTLRHRDTMEQVRIAIPELRNTIAKE 503


>gi|7676162|sp|O26346|SYH_METTH RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
          Length = 425

 Score = 74.8 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 65/436 (14%), Positives = 131/436 (30%), Gaps = 96/436 (22%)

Query: 273 WKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
            +  + +   +RR  +   Y EI TP   +  L+                +    T K  
Sbjct: 17  MRNRKEVEGVLRRTFETYGYHEIKTPIFEELKLFTVKS------GEEVVNQIYHFTDKGG 70

Query: 332 RTFALKP-MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
           R  AL+P +  P      N   K  +  P+++  FGS +R E   +     R R F Q  
Sbjct: 71  RELALRPELTAPVARLYMNEMQKKPK--PIKMYYFGSCFRYERPQA----GRFRQFWQFG 124

Query: 391 AHVF------CTKEQMFNECLKIHNLIISIYK-----------DFGFEKIMVKLSTRPEK 433
             +          E +      +H L +  ++             G E+I  +L  R   
Sbjct: 125 CELIGGRSPLAEAEVISLASESLHELGLDGFEVHIGHLGILRGILGREEIPSELQDRIMG 184

Query: 434 RV--------------------------------GSDALWDDAENIMKGVLDTIKNSSQD 461
            +                                G   + DD E  + G  ++++   + 
Sbjct: 185 VIDKGDVEELEALLGEVEVSGESRELLMKLIGTQGGPEVLDDVEEYLGGYSESLEALEEF 244

Query: 462 R---------------INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF 506
           R               +N G+  G   + G  FE  + +   +   CG     +NL   F
Sbjct: 245 RELVETLHYFGVDDYHVNLGIARGLDYYTGIVFEIYVPELGAQKQICGG--GTYNLVETF 302

Query: 507 NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVE 566
               V S                  +R +  +  + +         +   V  I  S V 
Sbjct: 303 GGERVESTGFA-----------FGFDRLMNALGMDEENMRM-----VDVFVIPIQDSTVP 346

Query: 567 YAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS 626
            A  I   L++  +S + +     +   +           ++ G++E  +  + ++    
Sbjct: 347 EAIRITQELRAAGVSADLEVSGRKLRKALSHADNLGARFAVLTGEREIQDGKVTVKDMER 406

Query: 627 TTTQKVSLLDAIPILT 642
            + + +   + +  + 
Sbjct: 407 NSQETLPRDEMVDKIK 422


>gi|257456234|ref|ZP_05621431.1| glycyl-tRNA synthetase [Treponema vincentii ATCC 35580]
 gi|257446320|gb|EEV21366.1| glycyl-tRNA synthetase [Treponema vincentii ATCC 35580]
          Length = 450

 Score = 74.8 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 57/431 (13%), Positives = 126/431 (29%), Gaps = 66/431 (15%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKI---KDDYEEINTPQVLDQHLWQQSGHWDSY---- 314
            +G   +   G ++   +     +++    +    I+   ++   +W+ SGH +++    
Sbjct: 31  QNGAWDYGPLGIELKNNIARAWWKEMTQLHNSIVGIDAAILMHPRVWEASGHVENFTDPL 90

Query: 315 ------------------------------------RANMFAVKCADDTIKDLRTFALKP 338
                                               + N+        T  +     L+P
Sbjct: 91  VDCKKCKARFRADQIDPEKLAKKECPDCGGELTDVRKFNLMFKTHIGPTDDNSSLIYLRP 150

Query: 339 MNCPGHVAVFNHGLKSYR-ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK 397
               G    + +  +S R ++P  +A+ G  +RNE   + + + R   F Q +   F   
Sbjct: 151 ETAQGIYVNYKNVAQSNRMKIPFGIAQIGKAFRNEIV-TKNFIFRTCEFEQMEMQFFVKP 209

Query: 398 --EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTI 455
             +  +    +              +K+        E    +   +D       G  +  
Sbjct: 210 GTDDEWFNYWREQRWAFYKKHGVRMDKLRWHRHGPDELAHYAKDAYDIEYEFPMGFKELE 269

Query: 456 KNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS 515
              ++   +   L     F G   +YI +D     +    I+    L      F  +S+ 
Sbjct: 270 GVHNRTNFD---LTRHTEFSGKDMQYIDQDNGNERYIPYIIETSAGLTRNLLMFLCDSYE 326

Query: 516 EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTI--TSSAVEYAQEIAN 573
           E+      +   + ++  F               ++PI   V  +       E AQ+I  
Sbjct: 327 EQKVADKGNDDDWRTVLHFH------------PVIAPITVAVLPLMKKDGLAELAQDIQA 374

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            L+      + D     I  + R       P  I        + ++ +R   S    +V 
Sbjct: 375 ELRE-DFRTDYDQAGA-IGKRYRRQDEAGTPFCITVDYDSKEDGTVTLRFRDSMDQVRVP 432

Query: 634 LLDAIPILTKE 644
             +    +  E
Sbjct: 433 RAELANRIRTE 443


>gi|302534311|ref|ZP_07286653.1| glycyl-tRNA synthetase [Streptomyces sp. C]
 gi|302443206|gb|EFL15022.1| glycyl-tRNA synthetase [Streptomyces sp. C]
          Length = 460

 Score = 74.8 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 46/334 (13%), Positives = 99/334 (29%), Gaps = 49/334 (14%)

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
                T        L+P    G    F      S ++ P  +A+ G  +RNE +   + +
Sbjct: 145 THLGPTQDTGSKAYLRPETAQGIFTNFAMVQTSSRKKPPFGIAQMGKSFRNEITPG-NFI 203

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            R R F Q +   F    +             + Y+  G  +  ++    P +++     
Sbjct: 204 FRTREFEQMEMEFFVKPGEDDQWQEYWMQERWNWYRGLGLREENMRWYDHPAEKL----- 258

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDF 500
                        +  +     I      G   F        L+    R           
Sbjct: 259 -------------SHYSKRTADIEYRFNFGGSEF------SELEGVANRTDYDLKAHSA- 298

Query: 501 NLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK----------------G 544
              S  +  Y +  +++ +   +     G     +  M++ +                  
Sbjct: 299 --ASGTDLVYYDQEAQEKYTPYVIEPAAGVNRAMLAFMLDAYVEDEAPNAKGAMEKRTVM 356

Query: 545 NLPLWLSPIQAIVTTITSSAV--EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
                L+P++  V  ++ +A     A+ +A  L+ +  +IE D     I  + R      
Sbjct: 357 RFDPRLAPVKVAVLPLSRNANLSPKAKGLAADLRKN-WNIEFDDAGA-IGRRYRRQDEIG 414

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
            P  +        + ++ +R   +   ++VSL  
Sbjct: 415 TPFCVTVDFDTLDDNAVTVRERDTMKQERVSLDQ 448


>gi|29832178|ref|NP_826812.1| glycyl-tRNA synthetase [Streptomyces avermitilis MA-4680]
 gi|59798584|sp|Q82BR9|SYG_STRAW RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|29609296|dbj|BAC73347.1| putative glycyl-tRNA synthetase [Streptomyces avermitilis MA-4680]
          Length = 460

 Score = 74.8 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 56/334 (16%), Positives = 98/334 (29%), Gaps = 49/334 (14%)

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
                T        L+P    G    F      S R+ P  +A+ G  +RNE +   + +
Sbjct: 145 THLGPTQDSGSVAYLRPETAQGIFTNFAQVQQTSRRKPPFGIAQMGKSFRNEITPG-NFI 203

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            R R F Q +   F    +             + Y   G  +  ++    P         
Sbjct: 204 FRTREFEQMEMEFFVKPGEDEKWQEFWMQERWNWYTGLGLREENMRWYDHPA-------- 255

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDF 500
            +   +  K   D            G L G             K A G+D          
Sbjct: 256 -EKLSHYSKRTADIEYRFQFGGNEWGELEGVANRTDYDLSAHAK-ASGQDLS-------- 305

Query: 501 NLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE--------NFKGNL------ 546
                   ++     E+  P +I     G     +  +++        N KG +      
Sbjct: 306 --------YFDQEAGERWTPYVIE-PAAGVGRAMLAFLLDAYVEDEAPNAKGKMEKRTVL 356

Query: 547 --PLWLSPIQAIVTTIT--SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
                LSP++  V  ++        A+ +A  L+ H  +IE D     I  + R      
Sbjct: 357 RLDPRLSPVKVAVLPLSRNPELSPKAKGLATALRQH-WNIEFDDAGA-IGRRYRRQDEIG 414

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
            P  +        + ++ +R   S   ++VSL  
Sbjct: 415 TPFCVTVDFDTLDDNAVTVRERDSMKQERVSLDQ 448


>gi|288803216|ref|ZP_06408650.1| glycine--tRNA ligase [Prevotella melaninogenica D18]
 gi|288334257|gb|EFC72698.1| glycine--tRNA ligase [Prevotella melaninogenica D18]
          Length = 515

 Score = 74.8 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 62/348 (17%), Positives = 115/348 (33%), Gaps = 60/348 (17%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        +        L+P    G    F +  K+   +LP  + + G  +RNE  
Sbjct: 194 FNLMFSTEMGASADATNKIYLRPETAQGIFVNFLNVQKTGRMKLPFGICQIGKAFRNEIV 253

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
            +   + R+R F Q +   FC    E  + E  K H L        G E        +  
Sbjct: 254 -ARQFVFRMREFEQMEMQFFCQPGTEMKWFEYWKKHRLAWHEGLGMGDENYRFHDHEKLA 312

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
                    + A +I            +  +  G    EG      F+      + +  +
Sbjct: 313 HYA------NAATDI------------EFHMPFGFKEVEGIHSRTNFD------LSQHEK 348

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK--------- 543
               QV +  P R         +E   P ++  ++ G    F+ +M  ++          
Sbjct: 349 YSGRQVKYFDPER---------NENYTPYVVETSI-GVDRMFLSVMCHSYTEEALENGSS 398

Query: 544 ---GNLPLWLSPIQAIVTTITSSAV--EYAQEIANLLKSH---HLSIETDFRNETINYKI 595
                LP  L+P++  V  + +     E AQEI N LK H   H+  +     ++I  + 
Sbjct: 399 RVVLKLPEPLAPVKCAVLPLVNKDGLPEKAQEIVNSLKFHFNTHMEAK-----DSIGKRY 453

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           R       P  +       ++ ++ +R   S   ++V +     I+  
Sbjct: 454 RRQDAIGTPFCVTVDGDTLTDNTVTLRYRDSMKQERVPVEKLREIIED 501


>gi|225869128|ref|YP_002745076.1| seryl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus]
 gi|259511681|sp|C0ME07|SYS_STRS7 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|225702404|emb|CAX00264.1| seryl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus]
          Length = 425

 Score = 74.8 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 38/243 (15%), Positives = 87/243 (35%), Gaps = 21/243 (8%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIF 276
           G       E+ ++    +   + + H  L   +D+          G+  +F+   G ++ 
Sbjct: 115 GADEEDNVEIRRWGKPRQFDFDIKAHWDLGEALDILDWERGAKVTGARFLFYKNLGARLE 174

Query: 277 QTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFA 335
           + L ++M    +K+ Y+EI  P +++      +G +  ++ + F +        D  +F 
Sbjct: 175 RALYNFMLDEHLKEGYQEIIPPYMVNHDSMFGTGQYPKFKEDTFEL--------DGTSFV 226

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAH 392
           L P         +   +   +ELP+        +R+E   +     GL+R+  F + +  
Sbjct: 227 LIPTAEVPLTNYYRGDIIDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMV 286

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKI----MVKLSTRPEKRVGSDALWDDAENIM 448
            F   E  + E  K+     +I +                     +     +W  A+N  
Sbjct: 287 KFAKPETSYEELEKMTANAENILQKLELPYRVLALCTGDMGFSAAKTYDLEVWIPAQNTY 346

Query: 449 KGV 451
           + +
Sbjct: 347 REI 349


>gi|68535685|ref|YP_250390.1| glycyl-tRNA synthetase [Corynebacterium jeikeium K411]
 gi|68263284|emb|CAI36772.1| glycyl-tRNA synthetase [Corynebacterium jeikeium K411]
          Length = 459

 Score = 74.8 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 59/345 (17%), Positives = 115/345 (33%), Gaps = 38/345 (11%)

Query: 307 QSGHWDSYRANMFAVKCADDTIKDLRTF-ALKPMNCPGHVAVFNH-GLKSYRELPVRLAE 364
           Q G W   +A    +K     + D      L+P    G    F +    S ++ P  +A+
Sbjct: 128 QPGAWTEPKAFSGLLKTFLGPVDDKEGLHYLRPETAQGIFTNFKNVMTTSRQKPPFGIAQ 187

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
            G  +RNE +   + + R R F Q +   F    +         +     Y D G     
Sbjct: 188 VGKSFRNEITPG-NFIFRTREFEQMEMEFFVKPGEDEEWHQYWIDDRHQWYIDLGINPDN 246

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG--AFYGPKF--- 479
           ++L   P+         +   +  K  +D       +    G L G      Y  +    
Sbjct: 247 LRLYEHPK---------EKLSHYSKRTVDVEYAFHFNGSKWGELEGVANRTDYDLRVHSE 297

Query: 480 ----EYILKDAIGRDWQCG-TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
               +    D    +     TI+    L     AF V++++E+  P        G+  R 
Sbjct: 298 GSGEDLSFYDQTTEERWIPYTIEPAAGLGRAMMAFLVDAYTEEEVPNAKG----GTDTRT 353

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTIT--SSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
           +          L   L+P++  V  ++   S    A++IA  L+    +++ D     I 
Sbjct: 354 V--------LKLDRRLAPVKIAVLPLSKKESLTPTAEKIAGQLRGF-WNVDYDTSGA-IG 403

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
            + R       P  +        + ++ +R   +   +++ + D 
Sbjct: 404 RRYRRQDEIGTPFCVTVDFDTLEDNAVTVRERDTMEQERIKIEDL 448


>gi|306828941|ref|ZP_07462133.1| serine--tRNA ligase [Streptococcus mitis ATCC 6249]
 gi|304429119|gb|EFM32207.1| serine--tRNA ligase [Streptococcus mitis ATCC 6249]
          Length = 424

 Score = 74.8 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 75/193 (38%), Gaps = 16/193 (8%)

Query: 267 FWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD 325
           F+   G ++ + + ++M     K+ Y E+ TP +++      +G +  ++ + F +K  +
Sbjct: 165 FYKGLGARLERAIYNFMLDEHGKEGYTEVITPYIVNHDSMFGTGQYPKFKEDTFELKDTN 224

Query: 326 DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMR 382
                   + L P         +   +   ++LP+        +R+E   +     GL+R
Sbjct: 225 --------YVLIPTAEVPLTNYYRDEILDGKDLPIYFTAMSPSFRSEAGSAGRDTRGLIR 276

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSD 438
           +  F + +   F   E+ + E  K+     +I +       +V LST             
Sbjct: 277 LHQFHKVEMVKFAKPEESYEELEKMTANAENILQKLNLPYRVVALSTGDMGFSAAKTYDL 336

Query: 439 ALWDDAENIMKGV 451
            +W  A+N  + +
Sbjct: 337 EVWIPAQNTYREI 349


>gi|330993337|ref|ZP_08317272.1| Alanyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1]
 gi|329759367|gb|EGG75876.1| Alanyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1]
          Length = 861

 Score = 74.4 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 33/148 (22%), Positives = 58/148 (39%), Gaps = 1/148 (0%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSS 116
           ++      D RS     HS  H++ EA++          G     D   +D  + +P + 
Sbjct: 525 AVTAQVDHDRRSAIRAHHSATHLLHEAMRRRLGAHVTQKGSLNAPDRLRFDVSQPRPITP 584

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
           +ELA IE ++   I  ++    ++++ E+A E         K      + +       R 
Sbjct: 585 EELADIEAEVNARIRENTDVTTRHMTPEEAIEQGAMALFGEKYGDEVRVVSMGGPEEGRA 644

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVA 204
           G   +LC G HVR TG +  F    +  
Sbjct: 645 GWSIELCGGTHVRRTGDIGLFRITSESG 672


>gi|319947603|ref|ZP_08021833.1| serine--tRNA ligase [Streptococcus australis ATCC 700641]
 gi|319746291|gb|EFV98554.1| serine--tRNA ligase [Streptococcus australis ATCC 700641]
          Length = 446

 Score = 74.4 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 36/222 (16%), Positives = 85/222 (38%), Gaps = 20/222 (9%)

Query: 242 EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINT 296
           E + H  L  ++D+          G+  +F+   G ++ + + ++M     K+ Y E+ T
Sbjct: 157 EPKAHWDLGEDLDILDWERGGKVTGARFLFYKGLGARLERAIYNFMLDEHGKEGYTEVIT 216

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +++      +G +  ++ + F +   +        + L P         +   +   +
Sbjct: 217 PYMVNHDSMFGTGQYPKFKEDTFELSDTN--------YVLIPTAEVPLTNYYRDEIIDGK 268

Query: 357 ELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           +LP+        +R+E   +     GL+R+  F + +   F   E+ + E  K+     +
Sbjct: 269 DLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESYEELEKMTANAEN 328

Query: 414 IYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
           I +       ++ LST              +W  A+N  + +
Sbjct: 329 ILQKLNLPYRVMALSTGDMGFSAAKTYDLEVWIPAQNTYREI 370


>gi|293364834|ref|ZP_06611551.1| serine--tRNA ligase [Streptococcus oralis ATCC 35037]
 gi|307703083|ref|ZP_07640030.1| seryl-tRNA synthetase [Streptococcus oralis ATCC 35037]
 gi|291316284|gb|EFE56720.1| serine--tRNA ligase [Streptococcus oralis ATCC 35037]
 gi|307623476|gb|EFO02466.1| seryl-tRNA synthetase [Streptococcus oralis ATCC 35037]
          Length = 424

 Score = 74.4 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 75/193 (38%), Gaps = 16/193 (8%)

Query: 267 FWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD 325
           F+   G ++ + + ++M     K+ Y E+ TP +++      +G +  ++ + F +K  +
Sbjct: 165 FYKGLGARLERAIYNFMLDEHGKEGYTEVITPYMVNHDSMFGTGQYPKFKEDTFELKDTN 224

Query: 326 DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMR 382
                   + L P         +   +   ++LP+        +R+E   +     GL+R
Sbjct: 225 --------YVLIPTAEVPLTNYYRDEILDGKDLPIYFTAMSPSFRSEAGSAGRDTRGLIR 276

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSD 438
           +  F + +   F   E+ + E  K+     +I +       +V LST             
Sbjct: 277 LHQFHKVEMVKFAKPEESYEELEKMTANAENILQKLNLPYRVVALSTGDMGFSAAKTYDL 336

Query: 439 ALWDDAENIMKGV 451
            +W  A+N  + +
Sbjct: 337 EVWIPAQNTYREI 349


>gi|228472354|ref|ZP_04057119.1| glycine--tRNA ligase [Capnocytophaga gingivalis ATCC 33624]
 gi|228276222|gb|EEK14957.1| glycine--tRNA ligase [Capnocytophaga gingivalis ATCC 33624]
          Length = 517

 Score = 74.4 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 58/334 (17%), Positives = 114/334 (34%), Gaps = 30/334 (8%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T +      L+P    G    F++  K+   ++P  +A+ G  +RNE  
Sbjct: 195 FNLMFGTKLGATSEGAMDLYLRPETAQGIFVNFSNVQKTGRMKIPFGIAQTGKAFRNEIV 254

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
            +   + R+R F Q +   F     +Q + E  K   L   +    G E        +  
Sbjct: 255 -ARQFIFRMREFEQMEMQYFIKPGTQQQWYEHWKKTRLAWHLSLGLGEENYRFHDHEKLA 313

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
               +    +         L+ I + +   +          + G K +Y   D   R + 
Sbjct: 314 HYADAACDIEFRFPFGFKELEGIHSRTDFDLG-----NHEKYSGKKLQYFDPDE-NRSYV 367

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
              ++    L   F A + +S  E+         + G   R +          LP  L+P
Sbjct: 368 PYVLETSVGLDRLFLAIFSHSLQEE--------VLEGGETRTV--------LRLPFVLAP 411

Query: 553 IQAIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
            +  V  +       E A +I N L+ +  ++  D ++  +  + R       P  I   
Sbjct: 412 TKVAVLPLVKKDGLPEIALDIFNDLR-YDFNVAYDEKDA-VGRRYRRQDAVGTPFCITVD 469

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            +   + ++ IR   +   Q+V +     ++ KE
Sbjct: 470 HQTKEDNTVTIRHRDTMEQQRVPISALRELILKE 503


>gi|302670582|ref|YP_003830542.1| alanyl-tRNA synthetase AlaS [Butyrivibrio proteoclasticus B316]
 gi|302395055|gb|ADL33960.1| alanyl-tRNA synthetase AlaS [Butyrivibrio proteoclasticus B316]
          Length = 884

 Score = 74.4 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 42/186 (22%), Positives = 76/186 (40%), Gaps = 20/186 (10%)

Query: 23  GSDVAESISRSLAKKAV--AVAING-------KVCDLSDPVREGSIEIITPEDPRSLAVI 73
             D+ E +  + AK  V  AV + G       KV   S  V +  + +    + R+    
Sbjct: 511 VGDIGEILGSNGAKFEVTEAVKVAGGRTAHVGKVVSGSFKVSD-KVTLSVDAENRAKTCR 569

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIAR 132
            HS  H++ +A+Q +  +     G   + D   +DF   Q  ++DE+ ++E  +   I  
Sbjct: 570 NHSATHLLQKALQMVLGDGVEQAGSYQDPDKTRFDFSYHQAMTADEIKKVEDIVNSKILE 629

Query: 133 DSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRST 191
             P + + +S E A++         K          E V +   G++  +LC G HV +T
Sbjct: 630 ALPVVTKEMSIEDAKKTGAMALFGEKY--------GETVRVVNMGDFSIELCGGTHVANT 681

Query: 192 GQVKKF 197
             +  F
Sbjct: 682 SHIGLF 687


>gi|302345856|ref|YP_003814209.1| glycine--tRNA ligase [Prevotella melaninogenica ATCC 25845]
 gi|302149762|gb|ADK96024.1| glycine--tRNA ligase [Prevotella melaninogenica ATCC 25845]
          Length = 515

 Score = 74.4 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 61/348 (17%), Positives = 115/348 (33%), Gaps = 60/348 (17%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        +        L+P    G    F +  K+   +LP  + + G  +RNE  
Sbjct: 194 FNLMFSTEMGASADATNKIYLRPETAQGIFVNFLNVQKTGRMKLPFGICQIGKAFRNEIV 253

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
            +   + R+R F Q +   FC    E  + E  K H L        G +        +  
Sbjct: 254 -ARQFVFRMREFEQMEMQFFCQPGTEMKWFEYWKKHRLAWHEGLGMGDDNYRFHDHEKLA 312

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
                    + A +I            +  +  G    EG      F+      + +  +
Sbjct: 313 HYA------NAATDI------------EFHMPFGFKEVEGIHSRTNFD------LSQHEK 348

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK--------- 543
               QV +  P R         +E   P ++  ++ G    F+ +M  ++          
Sbjct: 349 YSGRQVKYFDPER---------NENYTPYVVETSI-GVDRMFLSVMCHSYTEEALENGSS 398

Query: 544 ---GNLPLWLSPIQAIVTTITSSAV--EYAQEIANLLKSH---HLSIETDFRNETINYKI 595
                LP  L+P++  V  + +     E AQEI N LK H   H+  +     ++I  + 
Sbjct: 399 RVVLKLPEPLAPVKCAVLPLVNKDGLPEKAQEIVNSLKFHFNTHMEAK-----DSIGKRY 453

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           R       P  +       ++ ++ +R   S   ++V +     I+  
Sbjct: 454 RRQDAIGTPFCVTVDGDTLTDNTVTLRYRDSMKQERVPVEKLREIIED 501


>gi|330469568|ref|YP_004407311.1| glycyl-tRNA synthetase [Verrucosispora maris AB-18-032]
 gi|328812539|gb|AEB46711.1| glycyl-tRNA synthetase [Verrucosispora maris AB-18-032]
          Length = 459

 Score = 74.4 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 46/328 (14%), Positives = 97/328 (29%), Gaps = 23/328 (7%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N            D     L+P    G    +N+   +  ++ P  +A+ G  +RNE +
Sbjct: 138 FNGLMKTFLGPVESDEGLHYLRPETAQGIFVNYNNVANAARKKPPFGIAQTGKSFRNEIT 197

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              + + R R F Q +   F              +   + Y D G     ++    P+  
Sbjct: 198 PG-NFIFRTREFEQMEMEFFVEPGTDEQWHEYWLSERWNWYVDLGLSAENMRFYEHPK-- 254

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
                  +   +  K  +D              L G       + ++ L           
Sbjct: 255 -------EKLSHYSKRTVDIEYRFQFGGSEFAELEGIAN----RTDFDLSTHSKHSG-VD 302

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVM---IHRAVFGSIERFIGIMIENFKGNLPLWLS 551
               D     R+  + +   +     V+   +            G M E         L+
Sbjct: 303 LSYFDQTKSERWVPYVIEPAAGLTRAVLAFLLEAYDVDQAPNAKGKMEERTVMRFDPRLA 362

Query: 552 PIQAIVTTIT--SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIIC 609
           P++  V  ++   +    A+++A  L+     +E D     I  + R       P  +  
Sbjct: 363 PVKVAVLPLSRNEALSPKAKDLAAQLRKR-WVVEFDDSQA-IGRRYRRQDEIGTPFCVTV 420

Query: 610 GDKEASERSIGIRRFGSTTTQKVSLLDA 637
                 + ++ IR   +   ++++L   
Sbjct: 421 DFDTLDDNAVTIRNRDTMAQERIALDQV 448


>gi|296109164|ref|YP_003616113.1| histidyl-tRNA synthetase [Methanocaldococcus infernus ME]
 gi|295433978|gb|ADG13149.1| histidyl-tRNA synthetase [Methanocaldococcus infernus ME]
          Length = 406

 Score = 74.4 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 75/427 (17%), Positives = 139/427 (32%), Gaps = 92/427 (21%)

Query: 268 WHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADD 326
           +  +  K  + +   +R   +   YEEI TP      L  +              +    
Sbjct: 11  FTPEEMKKRRYVEKKLREVFESYGYEEILTPTFESFELIAKKT------GEEIRKQLYVF 64

Query: 327 TIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG----------- 375
                R  +L+P      V  + + LK+Y + P+RL  F + +R E              
Sbjct: 65  KDHGGRELSLRPEMTSPVVRFYLNELKNYPK-PLRLYYFANCFRYERPQAGRFREFWQMG 123

Query: 376 -SLHGLMRVR------------------GFTQDDAHV---------FCTKEQMFNECLKI 407
             L G  R                     F+ +  H+         F   E+   +  ++
Sbjct: 124 CELIGCKREVADAEVINLAIDGLKNIDVEFSLEIGHLGVLRGILRKFKVGEEEEVKIRRL 183

Query: 408 HNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENIMKGVLDTIKN------ 457
            +       D    +I+ K        +    G   + ++A+ ++K   ++++       
Sbjct: 184 IDKEDYESLDKYLTEILDKEKRDLIFNILELKGGKEILEEAKELLKDFPESLEAVRNLEN 243

Query: 458 -----SSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
                    +IN G+  G   + G  FE   K   G    CG  + D NL   F      
Sbjct: 244 ILKYTYDNYKINFGIARGLDYYTGMVFEIYGK--KGAKQICGGGRYD-NLIETFG----- 295

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIA 572
                  P       +G     + + IE  +            +V  +  + +  A EIA
Sbjct: 296 -----GEPEPAVGFAYGFDRIMMNVDIEIKEEKY---------LVIPLNENLIVKAMEIA 341

Query: 573 NLLKSHHLSIETDFRNETINYKIREH----SIKKIPIIIICGDKEASERSIGIRRFGSTT 628
           N+L+     +E     E +  K+R+     + K I  ++I G+KE  E  + I+   S  
Sbjct: 342 NILRKKGKKVEL----EIMGRKLRKALDYANSKGISKVVIVGEKEVKEGKVTIKDMESGE 397

Query: 629 TQKVSLL 635
            + V + 
Sbjct: 398 QKLVDIE 404


>gi|328882342|emb|CCA55581.1| Glycyl-tRNA synthetase [Streptomyces venezuelae ATCC 10712]
          Length = 459

 Score = 74.4 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 49/321 (15%), Positives = 107/321 (33%), Gaps = 23/321 (7%)

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
                T        L+P    G    F      S ++ P  +A+ G  +RNE +   + +
Sbjct: 144 THLGPTQDSGSVAYLRPETAQGIFTNFAQVQTTSRKKPPFGIAQMGKSFRNEITPG-NFI 202

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            R R F Q +   F    +             + Y   G  +  ++    P++++ S   
Sbjct: 203 FRTREFEQMEMEFFVKPGEDEQWQEYWMEQRWNWYTGLGLREENMRWFEHPKEKL-SHYS 261

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY---GPKFEYILKDAIGRDWQCGTIQ 497
              A+   +      +    + +         A     G    + L+   G  +    I+
Sbjct: 262 KRTADIEYRFSFGGSEWGELEGVANRTDYDLSAHAKASGANLSF-LEQESGERYTPYVIE 320

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIV 557
               +     AF ++++ E   P        G +E+   + +++        L+P++  V
Sbjct: 321 PAAGVGRAMLAFLLDAYIEDEAP-----NAKGVMEKRTVLRLDHR-------LAPVKVAV 368

Query: 558 TTIT--SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEAS 615
             ++        A+ +A  L+  + +IE D     I  + R       P  +        
Sbjct: 369 LPLSRNPQLSPKAKGLAADLR-QNWNIEFDDAGA-IGRRYRRQDEIGTPYCVTVDFDTLD 426

Query: 616 ERSIGIRRFGSTTTQKVSLLD 636
           + ++ +R   +   ++VSL  
Sbjct: 427 DNAVTVRERDTMKQERVSLDQ 447


>gi|332654830|ref|ZP_08420572.1| glycine--tRNA ligase [Ruminococcaceae bacterium D16]
 gi|332516173|gb|EGJ45781.1| glycine--tRNA ligase [Ruminococcaceae bacterium D16]
          Length = 478

 Score = 74.4 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 45/354 (12%), Positives = 103/354 (29%), Gaps = 59/354 (16%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T     T  L+P    G    F +  ++  ++LP  + + G  +RNE +
Sbjct: 154 FNLMFKTFQGVTEDAKNTVYLRPETAQGIFVNFQNVQRTTRKKLPFGVCQIGKSFRNEIT 213

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              +   R R F Q +   FC             +       +   ++  ++L     + 
Sbjct: 214 PG-NFTFRTREFEQMELEFFCKPGTDMEWFQYWRSFCRDWLLNLNMKEEHLRLRDHSPEE 272

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           +                     +            G G  +G   +    D        G
Sbjct: 273 L------------------CFYSKGTTDFEFLFPFGWGELWGVA-DRTDYDLTQHQTTSG 313

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK----------- 543
                       +  Y +  + + +   +     G+    +  ++E +            
Sbjct: 314 K-----------DMTYFDQETGEHYIPYVVEPSLGADRVTLAFLVEAYDEEVVGQDKKGN 362

Query: 544 ------GNLPLWLSPIQAIVTTITSSAV--EYAQEIANLLKSHHLSIETDFRNETINYKI 595
                  +    L+P +A +  ++   V    AQ++ + L  +   ++ D    +I  + 
Sbjct: 363 DDVRVVMHFHPALAPFKAAILPLSKKEVLAGPAQKLRDELSKY-FMVDYDDTG-SIGKRY 420

Query: 596 REHSIKKIPIIII-----CGDKEA-SERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           R       P  I       GD+   ++  + IR   +    ++ +      L +
Sbjct: 421 RRQDEIGTPYCITLDFQTVGDENTPADNCVTIRDRDTMEQVRIPMDQVKSWLEE 474


>gi|24214088|ref|NP_711569.1| glycyl-tRNA synthetase [Leptospira interrogans serovar Lai str.
           56601]
 gi|59798589|sp|Q8F6C0|SYG_LEPIN RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|24194969|gb|AAN48587.1| glycyl-tRNA synthetase [Leptospira interrogans serovar Lai str.
           56601]
          Length = 464

 Score = 74.4 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 50/386 (12%), Positives = 120/386 (31%), Gaps = 65/386 (16%)

Query: 281 SYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADD----------TIKD 330
            ++  +  + +    T + ++Q + + +    +        +  D           + +D
Sbjct: 107 KFLEDQKGEGFATGLTLEKMNQVIKESNFACPNCGQRGTFTEARDFNLMFKTSHGASAED 166

Query: 331 LRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
                L+P    G    F + + +  R++P  +A+ G  +RNE   +   + R R F Q 
Sbjct: 167 SLDIYLRPETAQGIFLNFKNVVSTTRRKIPFGIAQIGKSFRNEI-MARQFVFRTREFEQM 225

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIY-KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIM 448
           +   FC             N  ++   +  G +K  +++    ++ +             
Sbjct: 226 EMEFFCEPGTQKEWFSHWVNYCMNWLTEQVGIKKENLRVREHEKEEL------------- 272

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF-- 506
                +  +     I      G G  +G                      D N   +F  
Sbjct: 273 -----SFYSEGTSDIEFKYNFGWGELWG---------------IASRTDYDLNQHQKFSG 312

Query: 507 -NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK------------GNLPLWLSPI 553
            +  Y +    K +   +     G    F+ ++ + ++                  ++P+
Sbjct: 313 EDLKYQDQVQNKKYVPFVVEPALGVNRLFLAVVTDAYEEEKLPDGETRTVLRFSPKIAPV 372

Query: 554 QAIV--TTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
           +A +          E ++EI   L     +IE D     I  + R       P  I    
Sbjct: 373 KAAIFPLMKKDGLPEKSREIFADLSKLG-NIEYDDGGA-IGKRYRRQDEIGTPFCITVDY 430

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDA 637
               + ++ +R   S + +++++   
Sbjct: 431 DTLKDDTVTVRERDSMSQERIAVNQL 456


>gi|289705793|ref|ZP_06502176.1| glycine--tRNA ligase [Micrococcus luteus SK58]
 gi|289557509|gb|EFD50817.1| glycine--tRNA ligase [Micrococcus luteus SK58]
          Length = 460

 Score = 74.4 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 57/390 (14%), Positives = 122/390 (31%), Gaps = 59/390 (15%)

Query: 277 QTLISYMRRKIK--DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
             L ++  +K +  +   EI  P    Q  W +   +                  +    
Sbjct: 103 HLLEAFEAKKGRPAEGMAEIVCPDCGTQGAWTEPQLFSG-----LVKTYLGPVDNEEGLH 157

Query: 335 ALKPMNCPGHVAVFNHGL-KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
            ++P    G    F + L  + ++ P  + + G  +RNE +   + + R R F Q +   
Sbjct: 158 YMRPETAQGIFVNFLNVLGAARKKPPFGIGQIGKAFRNEITPG-NFIFRTREFEQMEIEY 216

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
           F    +      +        + D G +   ++   + +      A + DA   ++    
Sbjct: 217 FVPPAEAGQHFDRWVEDCWDWFIDLGIDPANLR---KFDVPADERAHYSDATIDLE---Y 270

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGR--DWQCGTIQVDFNLPSRFNAFYV 511
               +  D     + +     Y           +GR        +Q              
Sbjct: 271 DFGFTGGDGWGELMGIANRTDY----------DLGRHTAHSGTKMQYFDQ---------- 310

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFK----------------GNLPLWLSPIQA 555
            +++E   P +I    FG     +  +++ +                   L   L+P++A
Sbjct: 311 -ANNEHYTPYVIE-PSFGLTRAMMAFLVDAYAEDEAPNAKGGVDVRTVLKLDPRLAPVKA 368

Query: 556 IVTTITSSAV--EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
            V  ++         Q +A  L++   +IETD     I  + R       P  I      
Sbjct: 369 AVLPLSKKPELQPATQSLAAELRTL-WNIETDDSGA-IGRRYRRQDEIGTPFCITVDFDT 426

Query: 614 ASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             ++++ IR   +   ++V+L      L +
Sbjct: 427 LEDQAVTIRERDTMAQERVALSQVKSYLLE 456


>gi|154151276|ref|YP_001404894.1| histidyl-tRNA synthetase [Candidatus Methanoregula boonei 6A8]
 gi|166228579|sp|A7I940|SYH_METB6 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|153999828|gb|ABS56251.1| histidyl-tRNA synthetase [Methanoregula boonei 6A8]
          Length = 410

 Score = 74.4 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 56/420 (13%), Positives = 113/420 (26%), Gaps = 70/420 (16%)

Query: 268 WHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADD 326
           +     +  +++ + MR  ++   Y E+ TP+  +  L+                +    
Sbjct: 11  FLPDEMEARRSIEAKMREAVRRFGYREVCTPEFEELELFTLRS------GEGIMQEMYVF 64

Query: 327 TIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
             K  R  AL+P      + ++ +  K   + P+R   F   +R E         R R F
Sbjct: 65  EDKGGRKLALRPEITAAVIRMYINEAKVAPK-PLRWCYFADCFRYERPQK----GRYRQF 119

Query: 387 TQDDA------HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK--------LSTRPE 432
            Q  A            E +      ++   ++     G    M             R  
Sbjct: 120 WQFGAELIGADTALADAEVIMLAAEALNATGVTWELKVGHLAFMKNLLADLDPAAQRRVM 179

Query: 433 KRVGSDALWDDAE--------------------NIMKGVLDTIKN-SSQDRIN--TGVLL 469
             +        AE                      +    +       ++R+    G+L 
Sbjct: 180 AHLDKKDFEGLAETLAGMRKSGLNDSLTALVECRTLAEAFEIAGTIPEKERVEQTMGILD 239

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM------I 523
             G  Y   F      A G D+  G +           A                    +
Sbjct: 240 ASGVRYSLNFGI----ARGLDYYTGMV--FEGFAENLGAENQILGGGAYRLAHLFGGDDV 293

Query: 524 HRAVFGS-IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSI 582
               F    +R +  + E F        +         T     +A  +A   ++  +  
Sbjct: 294 ASCGFAIGFDRVMVSLGEVFA-------AKDTIAGIVCTDEGRSFALSVAREFRAAGIRA 346

Query: 583 ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           E D     +  ++   S       ++ G +EA    + ++   S   + +    AI  + 
Sbjct: 347 EMDLMGRGLGAQLAHASKT-ADFAVVIGKREADAGQVTLKNLHSGEQKTLDPAAAIAEVK 405


>gi|68475162|ref|XP_718299.1| potential proline-tRNA synthetase fragment [Candida albicans
           SC5314]
 gi|68475355|ref|XP_718200.1| potential proline-tRNA synthetase fragment [Candida albicans
           SC5314]
 gi|46439957|gb|EAK99268.1| potential proline-tRNA synthetase fragment [Candida albicans
           SC5314]
 gi|46440060|gb|EAK99370.1| potential proline-tRNA synthetase fragment [Candida albicans
           SC5314]
          Length = 169

 Score = 74.4 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 36/169 (21%), Positives = 65/169 (38%), Gaps = 16/169 (9%)

Query: 228 QQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI 287
           +    Q   F    +   H  L +   L +I    +G++ W + G  I   +   +R+++
Sbjct: 15  KSYGNQLSKFKYSKQIPTHEVLTK---LGYITYPRAGLVNWSKMGLLIQNKISQIIRQRM 71

Query: 288 KD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA 346
            +  +EE++   +  + LW+ +  WD         K   D       + L P        
Sbjct: 72  DEIQFEEVSLSLISHKELWKLTNRWDQ----EEIFKLVGD------EYLLVPTAEEEITN 121

Query: 347 VFN-HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
                 L+SY+  P+ L +    +RNE      GL+R + F   DA  F
Sbjct: 122 YVKKQFLESYKNFPLALYQINPKFRNEKRPR-GGLLRGKEFLMKDALFF 169


>gi|83944501|ref|ZP_00956954.1| alanyl-tRNA synthetase [Sulfitobacter sp. EE-36]
 gi|83844703|gb|EAP82587.1| alanyl-tRNA synthetase [Sulfitobacter sp. EE-36]
          Length = 886

 Score = 74.4 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 41/197 (20%), Positives = 84/197 (42%), Gaps = 21/197 (10%)

Query: 12  GSIKNFPVHATGSDVAESISRSLAKKAVAVAIN-GKVCDLSDPVREGSIEIITPEDPRSL 70
           G+IK      T +D          +K   V I+ G+V + +    + ++  +  +  R  
Sbjct: 509 GTIKTDSGVVTVTD---------TRKTAGVFIHIGEVTEGTVKTSQAAV--LDVDHARRT 557

Query: 71  AVI-RHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDELAQIEKKMQE 128
           ++   HS  H++ EA++    +  +  G     D   +D+    P ++D+LA +E+++  
Sbjct: 558 SIRANHSATHLLNEALRKTLGDHVMQRGSLNAADRLRFDYSHNHPMTADQLAAVEEEVNS 617

Query: 129 IIARDSPFLKQYLSHEKAREL------FESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
            I +++    + ++ + ARE+       E   +  +V  +    A       +Q    +L
Sbjct: 618 YIRQNTAVETRIMTPDDAREMGAQALFGEKYGDEVRVVSMGR-EAGSGKGADKQTYSLEL 676

Query: 183 CRGPHVRSTGQVKKFFK 199
           C G HVR TG +  F  
Sbjct: 677 CGGTHVRQTGDIGAFVL 693


>gi|226356735|ref|YP_002786475.1| glycyl-tRNA synthetase [Deinococcus deserti VCD115]
 gi|226318725|gb|ACO46721.1| putative glycine--tRNA ligase (Glycyl-tRNA synthetase) [Deinococcus
           deserti VCD115]
          Length = 504

 Score = 74.4 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 53/359 (14%), Positives = 107/359 (29%), Gaps = 41/359 (11%)

Query: 309 GHWDSYRANMFAVKCADDTIKDLRTFAL-KPMNCPGHVAVFNHGLKS-YRELPVRLAEFG 366
           G W   +      K     + D  ++   +P    G    F + + S  R LP  +A+ G
Sbjct: 158 GEWTEPKPFNMMFKTTIGPVADEDSYGYLRPETAQGIFTNFKNVVDSTSRRLPFGIAQIG 217

Query: 367 SVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK 426
             +RNE +   + + RVR   Q +   FC                +S ++  G  +  ++
Sbjct: 218 KAFRNEITPR-NFIFRVRELEQMEIEFFCVPGTDEQWHEHWLEKRLSWWEAQGVPRSKIE 276

Query: 427 LSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDA 486
           +   P +     A +      +     T+ +   + I        G+            A
Sbjct: 277 ILDVPAE---DLAHYSKRTYDLMYDYPTLGHEEIEGIANRSDYDLGSH---------TKA 324

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG-- 544
            G       +  + N  S       +  + K     +     G     + ++ E F    
Sbjct: 325 QGELGLVAKV--EENNDSVAKLTIPHPETNKPVVPFVIEPSAGVDRAMLAVLSEAFTKET 382

Query: 545 ----------NLPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHH-LSIETDFRNET 590
                      L   L+PI+  V  +          A+ I   L+      +  +     
Sbjct: 383 LENGSERIVLKLKPHLAPIKVAVIPLARNREEITSVAKAIKAELQGLGLGRVLYEDSGN- 441

Query: 591 INYKIREHSIKKIPIIIIC-------GDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           I    R H     P  +         G+  A   ++ +R   +   ++V + +    + 
Sbjct: 442 IGKAYRRHDEVGTPYCVTVDFDTVGKGEDPALTDTVTVRDRDTLAQERVKISELSAWIQ 500


>gi|183602387|ref|ZP_02963753.1| glycyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           HN019]
 gi|219683298|ref|YP_002469681.1| glycyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           AD011]
 gi|241191259|ref|YP_002968653.1| glycyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           Bl-04]
 gi|241196665|ref|YP_002970220.1| glycyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis DSM
           10140]
 gi|183218306|gb|EDT88951.1| glycyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           HN019]
 gi|219620948|gb|ACL29105.1| glycyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           AD011]
 gi|240249651|gb|ACS46591.1| glycyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           Bl-04]
 gi|240251219|gb|ACS48158.1| glycyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis DSM
           10140]
 gi|295794252|gb|ADG33787.1| glycyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis V9]
          Length = 491

 Score = 74.4 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 54/348 (15%), Positives = 110/348 (31%), Gaps = 50/348 (14%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPS 374
            NM           +     L+P    G    F +    S  + P  +A  G  +RNE +
Sbjct: 140 FNMMLRTHLGPVEDENSLHYLRPETAQGIFVDFKNVMTSSRSKPPFGIANTGKSFRNEIT 199

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              + + R R F Q +   F       +      N     Y D G     ++    P+  
Sbjct: 200 PG-NFIFRTREFEQMEMEFFVEPGTDEDWHQYWINARTQWYIDLGVNPENLRHYEHPK-- 256

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG-EGAFYGPKFEYILKDAIGRDWQC 493
                             + + + S+  ++     G +G+ +G      L+    R    
Sbjct: 257 ------------------EKLAHYSKRTVDIEYRFGFQGSDWG-----ELEGVANRTDFD 293

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK---------- 543
                  +      +++  +  EK  P +I     G     +  +++ +           
Sbjct: 294 LGAHAKHSGED--LSYFNQATGEKYIPYVIE-PAAGLSRSLMAFLVDAYDVDEAPNTKGG 350

Query: 544 ------GNLPLWLSPIQAIVTTITSSAV--EYAQEIANLLKSHHLSIETDFRNETINYKI 595
                   L   L+P++A V  ++        AQ++A  L+ +   I+ D     I  + 
Sbjct: 351 VDKRTVLRLDPRLAPVKAAVLPLSKKPELQSVAQDLAQDLRLNDWMIDYDESGA-IGRRY 409

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           R       P+ I        ++++ IR   +   ++V+L      + K
Sbjct: 410 RRQDEIGTPLCITVDFDTLDDQAVTIRERDTMQQERVALTQVADYVAK 457


>gi|328947373|ref|YP_004364710.1| alanyl-tRNA synthetase [Treponema succinifaciens DSM 2489]
 gi|328447697|gb|AEB13413.1| alanyl-tRNA synthetase [Treponema succinifaciens DSM 2489]
          Length = 605

 Score = 74.4 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 47/205 (22%), Positives = 84/205 (40%), Gaps = 31/205 (15%)

Query: 4   DIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIEIIT 63
            ++LT   G+   F V   G   AE   +  +K   A A  G + + SD   +       
Sbjct: 404 PLELTQELGAENGFTVDVEGFKEAERKHQEASKTQDAGAAKGGLAEQSDTTTK------- 456

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSDELAQI 122
                      H+  H++ +A+ ++  +     G  I +    +DF  ++P + +E+ ++
Sbjct: 457 ----------YHTATHLLQQALVNVLGDKVAQKGSNITNERMRFDFTFDRPMTKEEIQKV 506

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE---W 179
           E  + E I +D P   + +  EKA           K          E+V +Y  GE   W
Sbjct: 507 EDIVNEQIKKDLPVTMEVMPLEKATAEGARALFTNKY--------GEDVKVYTIGEKDNW 558

Query: 180 F--DLCRGPHVRSTGQVKKFFKLMK 202
           F  ++C GPHV+ T Q+ +F    +
Sbjct: 559 FSKEVCGGPHVQHTAQIGEFKIQKE 583


>gi|331266974|ref|YP_004326604.1| seryl-tRNA synthetase [Streptococcus oralis Uo5]
 gi|326683646|emb|CBZ01264.1| seryl-tRNA synthetase [Streptococcus oralis Uo5]
          Length = 424

 Score = 74.4 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 75/193 (38%), Gaps = 16/193 (8%)

Query: 267 FWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD 325
           F+   G ++ + + ++M     K+ Y E+ TP +++      +G +  ++ + F +K  +
Sbjct: 165 FYKGLGARLERAIYNFMLDEHGKEGYTEVITPYIVNHDSMFGTGQYPKFKEDTFELKDTN 224

Query: 326 DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMR 382
                   + L P         +   +   ++LP+        +R+E   +     GL+R
Sbjct: 225 --------YVLIPTAEVPLTNYYRDEILDGKDLPIYFTAMSPSFRSEAGSAGRDTRGLIR 276

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSD 438
           +  F + +   F   E+ + E  K+     +I +       +V LST             
Sbjct: 277 LHQFHKVEMVKFAKPEESYEELEKMTANAENILQKLNLPYRVVALSTGDMGFSAAKTYDL 336

Query: 439 ALWDDAENIMKGV 451
            +W  A+N  + +
Sbjct: 337 EVWIPAQNTYREI 349


>gi|15893315|ref|NP_346664.1| seryl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|46577537|sp|Q97N21|SYS2_CLOAB RecName: Full=Seryl-tRNA synthetase 2; AltName: Full=Serine--tRNA
           ligase 2; Short=SerRS 2; AltName:
           Full=Seryl-tRNA(Ser/Sec) synthetase 2
 gi|15022836|gb|AAK78004.1|AE007515_4 Seryl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|325507424|gb|ADZ19060.1| seryl-tRNA synthetase [Clostridium acetobutylicum EA 2018]
          Length = 425

 Score = 74.4 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 46/242 (19%), Positives = 83/242 (34%), Gaps = 15/242 (6%)

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDL----FHIAEDGSGVIFWHRKGWKIFQ 277
           G   N +           E E +DH +L+   DL          G+G   +   G  +  
Sbjct: 115 GGKENNKVVHVYGEKPQFEFEPKDHVELSNIHDLIDYKRGTKLSGNGFWIYKGYGAILEW 174

Query: 278 TLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFAL 336
            L++Y +   IKD YE I  P +L+    + +G +  ++  +   K   +   +   F L
Sbjct: 175 ALLNYFIEEHIKDGYEFILPPHILNYECGRTAGQFPKFKDEV--FKVGSNGEGEGMQFIL 232

Query: 337 KPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHV 393
            P      V +    +    ELP +   +   YR E      S  G++R   F + +   
Sbjct: 233 -PTAETALVNLHRDEILKEDELPKKYFAYTPCYRVEAGSYRASERGMIRGHQFNKIEMFQ 291

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK----LSTRPEKRVGSDALWDDAENIMK 449
           +   E       ++      + K  G    + K      +    +     +W  + N  K
Sbjct: 292 YTKPEDSDAALEELIGKAEKLVKGLGLHYRLSKLAAADCSASMAKTYDIEVWIPSMNEYK 351

Query: 450 GV 451
            V
Sbjct: 352 EV 353


>gi|294501365|ref|YP_003565065.1| histidyl-tRNA synthetase [Bacillus megaterium QM B1551]
 gi|294351302|gb|ADE71631.1| histidyl-tRNA synthetase [Bacillus megaterium QM B1551]
          Length = 422

 Score = 74.4 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 70/421 (16%), Positives = 139/421 (33%), Gaps = 71/421 (16%)

Query: 276 FQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDS---YRANMFAVKCADDTIKDL 331
           +Q +    R   +  +Y+EI TP + +       G  ++    +  M+  K   D     
Sbjct: 20  WQFVEQRAREICRAFNYQEIRTP-MFEHTELFLRGVGETTDIVQKEMYTFKDRGD----- 73

Query: 332 RTFALKP--MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
           R+  L+P      G   V N    +  + P +L   G ++R E   +     R R F Q 
Sbjct: 74  RSLTLRPEGTAAVGRSFVSNKMFGNPTQ-PTKLFYIGPMFRYERPQA----GRFRQFVQF 128

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFG----------------FEKIMVKLSTRPEK 433
                   +   +   ++  L++S Y+  G                 +     L      
Sbjct: 129 GVEALGVNDPAIDA--EVLALLMSFYQSLGLKKLKLVVNSLGDTESRQAHRQALIDHFAP 186

Query: 434 RVGS-----------------DALWDDAENIMKGV---LDTIKNSSQDRINTGVLLGEGA 473
           R+G                  D   D    +M      LD + + S++            
Sbjct: 187 RIGEFCSDCQSRLEKNPLRILDCKKDRDHELMATAPSILDYLNDYSKEYFEKVQQYLTD- 245

Query: 474 FYGPKFEYILKDAI--GRDWQCGTIQVDFNLPSRFNAFYVNSHS--------EKCHPVMI 523
                 +Y++   +  G D+   T     +    F A               E   P   
Sbjct: 246 ---LDIDYVVDPTLVRGLDYYNHTAFELMSEAEGFGAITTLCGGGRYNGLIQEIGGPETP 302

Query: 524 HRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIE 583
                 SIER +  + E     LP+    +   V T+   A E +  I N L+      +
Sbjct: 303 GIGFALSIERLLSAL-EAEGIELPVETG-VDCYVVTMGDEAKEKSVSIVNTLRRAGFVAD 360

Query: 584 TDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            D++++ +  + +     +   +++ GD E +++ + ++   S   Q+VS+   +  L +
Sbjct: 361 KDYQDKKMKAQFKAADRVQAKFVVVLGDDELAKQVVNVKNMESGEQQEVSIDQLVSYLQQ 420

Query: 644 E 644
           +
Sbjct: 421 Q 421


>gi|260591222|ref|ZP_05856680.1| glycine--tRNA ligase [Prevotella veroralis F0319]
 gi|260537087|gb|EEX19704.1| glycine--tRNA ligase [Prevotella veroralis F0319]
          Length = 515

 Score = 74.4 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 61/348 (17%), Positives = 115/348 (33%), Gaps = 60/348 (17%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        +        L+P    G    F +  K+   +LP  + + G  +RNE  
Sbjct: 194 FNLMFSTEMGASADATNKIYLRPETAQGIFVNFLNVQKTGRMKLPFGICQIGKAFRNEIV 253

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
            +   + R+R F Q +   FC    E  + E  K H L        G +        +  
Sbjct: 254 -ARQFVFRMREFEQMEMQFFCQPGTEMKWFEYWKKHRLAWHEALGMGDDNYRFHDHEKLA 312

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
                    + A +I            + R+  G    EG      F+      + +  +
Sbjct: 313 HYA------NAATDI------------EFRMPFGFKEVEGIHSRTNFD------LSQHEK 348

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK--------- 543
               Q+ +  P R         +E   P  +  ++ G    F+ +M  ++          
Sbjct: 349 FSGRQIKYFDPER---------NENYVPYDVETSI-GVDRMFLSVMCHSYTEEPLENGSS 398

Query: 544 ---GNLPLWLSPIQAIVTTITSSAV--EYAQEIANLLKSH---HLSIETDFRNETINYKI 595
                LP  L+P++  V  + +     E AQEI N LK H   H+  +     ++I  + 
Sbjct: 399 RIVLKLPEPLAPVKCAVLPLVNKDGLPEKAQEIVNQLKFHFNTHMEAK-----DSIGKRY 453

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           R       P  +       ++ ++ +R   S   ++V +     I+  
Sbjct: 454 RRQDAIGTPFCVTVDGDTLNDNTVTLRYRDSMKQERVPVEKLREIIED 501


>gi|76155685|gb|AAX26970.2| SJCHGC07933 protein [Schistosoma japonicum]
          Length = 118

 Score = 74.4 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 51/108 (47%), Gaps = 7/108 (6%)

Query: 276 FQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
            + L + + + +     + +  P +  +++W++SG W    +++F ++      +    +
Sbjct: 1   MRKLENLVDKYMLKLGAQRVQLPTLGPRNMWEKSGRWSEMHSSLFKLRD-----RLSHDY 55

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMR 382
            L+P +     +       SY+ LPV L +  S +R+EP    +GL+R
Sbjct: 56  CLQPTHEECITSFVTSLKLSYKSLPVFLYQITSKFRDEPRPK-NGLIR 102


>gi|331002910|ref|ZP_08326423.1| glycyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str. F0167]
 gi|330413203|gb|EGG92577.1| glycyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str. F0167]
          Length = 462

 Score = 74.4 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 42/335 (12%), Positives = 101/335 (30%), Gaps = 46/335 (13%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    F +  + S +++P  + + G  +RNE +
Sbjct: 151 FNLMFKTFQGVTEDAKNVVYLRPETAQGIFVNFKNVQRTSRKKVPFGIGQVGKSFRNEIT 210

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              +   R R F Q +   FC             +  I+     G  +  ++L    ++ 
Sbjct: 211 PG-NFTFRTREFEQMELEFFCKPGTDLEWFDYWRSYCINWLTSLGIREDQMRLRDHDKEE 269

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           +   + + +A   +                 G+            +    D        G
Sbjct: 270 L---SFYSNATTDI-----EFLFPFGWGELWGIA-----------DRTDYDLNRHQEVSG 310

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP------- 547
                       +  Y +  + + +   +     G+    +  +   +   +        
Sbjct: 311 Q-----------DLTYFDDETSERYIPYVIEPSLGADRVTLAFLCAAYDEEILEGGESRT 359

Query: 548 -----LWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
                  L+P++  +  ++    E A +I+  L  +  ++E D R   I  + R      
Sbjct: 360 VLRFHPALAPVKIGILPLSKKLNEGALKISEELSKY-YNVEFDDRGN-IGKRYRRQDEIG 417

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
            P  I       ++ ++ +R   S    ++ + + 
Sbjct: 418 TPFCITYDFDSENDNAVTVRDRDSMEQVRIPIAEL 452


>gi|306825809|ref|ZP_07459148.1| serine--tRNA ligase [Streptococcus sp. oral taxon 071 str. 73H25AP]
 gi|304432170|gb|EFM35147.1| serine--tRNA ligase [Streptococcus sp. oral taxon 071 str. 73H25AP]
          Length = 424

 Score = 74.4 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 75/193 (38%), Gaps = 16/193 (8%)

Query: 267 FWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD 325
           F+   G ++ + + ++M     K+ Y E+ TP +++      +G +  ++ + F +K  +
Sbjct: 165 FYKGLGARLERAIYNFMLDEHGKEGYTEVITPYMVNHDSMFGTGQYPKFKEDTFELKDTN 224

Query: 326 DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMR 382
                   + L P         +   +   ++LP+        +R+E   +     GL+R
Sbjct: 225 --------YVLIPTAEVPLTNYYRDEILDGKDLPIYFTAMSPSFRSEAGSAGRDTRGLIR 276

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSD 438
           +  F + +   F   E+ + E  K+     +I +       +V LST             
Sbjct: 277 LHQFHKVEMVKFAKPEESYEELEKMTANAENILQKLNLPYRVVALSTGDMGFSAAKTYDL 336

Query: 439 ALWDDAENIMKGV 451
            +W  A+N  + +
Sbjct: 337 EVWIPAQNTYREI 349


>gi|187918238|ref|YP_001883801.1| glycyl-tRNA synthetase [Borrelia hermsii DAH]
 gi|238689287|sp|B2S075|SYG_BORHD RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|119861086|gb|AAX16881.1| glycyl-tRNA synthetase [Borrelia hermsii DAH]
          Length = 445

 Score = 74.4 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 65/432 (15%), Positives = 128/432 (29%), Gaps = 70/432 (16%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKDDYEEIN---TPQVLDQHLWQQSGHWDSYRANMF 319
           SGV  +   G ++ Q +     + +   +E +    +  ++   +W  SGH +S+   + 
Sbjct: 28  SGVWDYGPLGIELKQNIQKEWWKNMVYSHENVVGLDSSILMRSEVWTASGHVESFAELLV 87

Query: 320 AVKCADDTIK--------------------DLRTF------------------ALKPMNC 341
             K   +  K                    D R+F                   L+P   
Sbjct: 88  DCKNCKNRFKIDSIDFSKGCPNCNSMGTFTDPRSFDLMFKTNIGAVEDSSNEIYLRPETA 147

Query: 342 PGHVAVFNHGLKSYR-ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
            G    F + L S R ++P  +A+ G  +RNE   + + + R   F Q +   F    QM
Sbjct: 148 QGIFVNFRNVLDSTRLKVPFGIAQVGKAFRNEIV-AKNFIFRTCEFEQMEMQFFVHPNQM 206

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQ 460
            +     +         F     +   + R ++  G +        I             
Sbjct: 207 DDWY---YYWQQKRLNFFIEILGIKSDNLRFKEHKGDELAHYAKAAIDIEYKFPFGFQEI 263

Query: 461 DRI----NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE 516
           + I    N  +         PK  +   D I  D     +       +R     +     
Sbjct: 264 EGIHNRGNYDLSQHAKFCGKPKL-FEYHDLISGDRYIPYVIETSLGLTRSVLMTLCD--- 319

Query: 517 KCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTI--TSSAVEYAQEIANL 574
                  H  + G  +R +          L   ++P +  +  +       E A+++   
Sbjct: 320 ----AYAHEELEGGDKRIV--------LRLHPKIAPYKVAILPLVKKDGLPELARKVFMQ 367

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
                     D  N TI  + R       P  +         +++ +R   + T  ++ +
Sbjct: 368 FSDDFYMFYDD--NGTIGKRYRRQDEIGTPYCVTVDYDSIENKTVTLRHRDTMTQVRIPI 425

Query: 635 LDAIPILTKESL 646
            D    +  E L
Sbjct: 426 NDLYSYVRTEIL 437


>gi|20807458|ref|NP_622629.1| glycyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
 gi|59798595|sp|Q8RB46|SYG_THETN RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|20515983|gb|AAM24233.1| Glycyl-tRNA synthetase, class II [Thermoanaerobacter tengcongensis
           MB4]
          Length = 461

 Score = 74.4 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 54/397 (13%), Positives = 114/397 (28%), Gaps = 72/397 (18%)

Query: 277 QTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDS---------YRANMFAVKCADDT 327
           Q +  Y++ K  D   E  T + + + + +                 + N+        T
Sbjct: 103 QLIEDYIKEKGLDISIEGWTNEQMMEFIKEHKVPCPKCGAHNFTEIRKFNLMFKTYVGVT 162

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
                   L+P    G    F +  + S +++P  + + G  +RNE +   + + R R F
Sbjct: 163 EDSKSEVFLRPETAQGIFVNFKNVQRTSRKKIPFGIGQIGKSFRNEITPG-NFIFRTREF 221

Query: 387 TQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
            Q +   FC    +  +    +   +   +      E +  +   + E    S A  D  
Sbjct: 222 EQMELEFFCKPGEDMEWFNYWRQFCMDWLVEFGLKRENLRFRDHKKEELSHYSTATTD-- 279

Query: 445 ENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPS 504
                             I      G G  +G                   I    +   
Sbjct: 280 ------------------IEYNFPFGWGELWG-------------------IANRTDYDL 302

Query: 505 RFNAFYVNSHSEKCHPVMIHRAVF-------GSIERFIGIMIENFK-----------GNL 546
           R +  +         PV   + +        G     +  +++ +              L
Sbjct: 303 RQHMEHSGEDMTYTDPVTGEKYIPYCIEPSVGVDRLMLAFLVDAYDEEEVEGETRVVLRL 362

Query: 547 PLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPII 606
              ++P++  V  ++    E A +I   LK      E D    +I  + R       P  
Sbjct: 363 HPAIAPVKVAVFPLSKKLNEAAYKIYLDLKKKFP-AEYDESG-SIGRRYRRQDEIGTPFC 420

Query: 607 IICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +       ++  + IR   +    ++ +      L +
Sbjct: 421 VTYDFDSENDHKVTIRDRDTMEQIRIDIDQVDKYLEE 457


>gi|260061512|ref|YP_003194592.1| glycyl-tRNA synthetase [Robiginitalea biformata HTCC2501]
 gi|88785644|gb|EAR16813.1| glycyl-tRNA synthetase [Robiginitalea biformata HTCC2501]
          Length = 516

 Score = 74.4 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 56/353 (15%), Positives = 114/353 (32%), Gaps = 51/353 (14%)

Query: 308 SGHWDSYRA-NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEF 365
           S +W   +  N+        +        L+P    G    F +  KS   ++P  +A+ 
Sbjct: 186 SRNWTDVKQFNLMFGTKLGASADSAMDLYLRPETAQGIFVNFLNVQKSGRMKIPFGIAQV 245

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
           G  +RNE   +   + R+R F Q +   F    +            +  +   G  +   
Sbjct: 246 GKAFRNEIV-ARQFIFRMREFEQMEMQFFIRPGEQKKWYEHWKAARMQWHLSLGLGEENY 304

Query: 426 KLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKD 485
           +     +    +DA  D                 + R   G    EG      F+     
Sbjct: 305 RFHDHEKLAHYADAAADI----------------EFRFPFGFKELEGIHSRTDFDL---- 344

Query: 486 AIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI----MIEN 541
           A    +    +Q              +    + +   +     G    F+ +    + E 
Sbjct: 345 ANHEKYSGKKLQYF------------DPELNEHYTPYVVETSIGLDRMFLAVFSHCLQEE 392

Query: 542 FKGN--------LPLWLSPIQAIVTTIT--SSAVEYAQEIANLLKSHHLSIETDFRNETI 591
             G+        LP  L+P +A +  +       E A+EI + LK    +++ D ++  +
Sbjct: 393 DLGDGNTRTVLRLPGVLAPTKAAILPLIKRDGLPELAREILDDLK-WDFNVQYDEKDA-V 450

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
             + R       PI I    +   +R++ +R   S   ++V +     ++ +E
Sbjct: 451 GRRYRRQDAAGTPICITVDHQSLEDRTVTLRHRDSMEQERVPIDQLGSLIGRE 503


>gi|284036607|ref|YP_003386537.1| glycyl-tRNA synthetase [Spirosoma linguale DSM 74]
 gi|283815900|gb|ADB37738.1| glycyl-tRNA synthetase [Spirosoma linguale DSM 74]
          Length = 502

 Score = 74.4 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 55/360 (15%), Positives = 105/360 (29%), Gaps = 72/360 (20%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+          +D     L+P    G    F +  K+   ++P  +A+ G  +RNE  
Sbjct: 174 FNLMFSTQVGSLAEDASLIYLRPETAQGIFVNFLNVQKTGRMKVPFGIAQIGKAFRNEIV 233

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
            +     R+R F Q +   F                        G E             
Sbjct: 234 -ARQFTFRMREFEQMEMQFFVRP---------------------GTEMHWY--------- 262

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIG-RDWQC 493
                 W DA       +        +++   V      +     +   K   G R+ + 
Sbjct: 263 ----ETWRDARMKFHQAV----GLPAEKLKFHVHEKLAHYANAAVDIEYKFPFGFREMEG 314

Query: 494 GTIQVDFNLP-------SRFNAFYVNSHSEKCHPV-----MIHRAVFGSIERFIGIMI-- 539
              + DF+L         +   F  +       P       +     G+   F+ ++   
Sbjct: 315 IHSRTDFDLKAHQELSRKKQQYFDNDVDPATGKPYGNYIPYVVETSVGADRLFLAVLCNA 374

Query: 540 -------------ENFKGNLPLWLSPIQAIV--TTITSSAVEYAQEIANLLKSHHLSIET 584
                        E     L   L+PI+A V          E A+EI   L+S    +  
Sbjct: 375 FTKETVGEGDQQKERTYLKLHPALAPIKAAVFPLVRKDGLPEKAEEIVKSLRSE-FRVVY 433

Query: 585 DFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           + R+  I  +     +   P  I    +   + ++ IR   +T   ++ + +    + +E
Sbjct: 434 EERDA-IGKRYTRQDLIGTPFCIAVDYQTLEDDTVTIRYRDTTEQIRIPVSELKARIGQE 492


>gi|227503138|ref|ZP_03933187.1| glycyl-tRNA synthetase [Corynebacterium accolens ATCC 49725]
 gi|306836623|ref|ZP_07469589.1| glycyl-tRNA synthetase beta subunit [Corynebacterium accolens ATCC
           49726]
 gi|227076199|gb|EEI14162.1| glycyl-tRNA synthetase [Corynebacterium accolens ATCC 49725]
 gi|304567453|gb|EFM43052.1| glycyl-tRNA synthetase beta subunit [Corynebacterium accolens ATCC
           49726]
          Length = 459

 Score = 74.4 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 63/380 (16%), Positives = 124/380 (32%), Gaps = 41/380 (10%)

Query: 277 QTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF-A 335
             + +Y  +   +   E     + D    Q  G W   +A    +K     + D +    
Sbjct: 101 HLIEAYEEKHGHE--PENGLADINDPETGQ-PGDWTEPKAFSGLLKTFLGPVDDEQGLHY 157

Query: 336 LKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           L+P    G    F +    S  + P  +A  G  +RNE +   + + R R F Q +   F
Sbjct: 158 LRPETAQGIFINFKNVMTSSRMKPPFGIANIGKSFRNEITPG-NFIFRTREFEQMEMEFF 216

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDT 454
               +         +     Y D G ++  ++L   P+         +   +  K  +D 
Sbjct: 217 VKPGEDEEWHQYWIDDRYKWYTDLGIKEENLRLYEHPK---------EKLSHYSKRTVDV 267

Query: 455 IKNSSQDRINTGVLLGEG---------AFYGPKFEYILKDAIGRDWQCG-TIQVDFNLPS 504
                      G L G              G   +    D    +      I+    L  
Sbjct: 268 EYAFGFKGSKWGELEGVANRTDYDLSVHDKGSGEDLSYYDQANDERWIPYVIEPAAGLGR 327

Query: 505 RFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT--S 562
              AF V+++ E+  P        G+ +R +          L   L+PI+  V  ++   
Sbjct: 328 SMMAFLVDAYDEEEAPNAKG----GTDKRVV--------LRLDRRLAPIKVAVLPLSKKE 375

Query: 563 SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
                A+E+A+ L+++  +++ D     I  + R       P  +        + ++ +R
Sbjct: 376 ELSTPARELADKLRAY-WNVDFDVSGA-IGRRYRRQDEVGTPFCVTFDFDSLEDNAVTVR 433

Query: 623 RFGSTTTQKVSLLDAIPILT 642
              +   ++V + D    L 
Sbjct: 434 ERDTMEQERVKIEDLESYLA 453


>gi|256375404|ref|YP_003099064.1| glycyl-tRNA synthetase [Actinosynnema mirum DSM 43827]
 gi|255919707|gb|ACU35218.1| glycyl-tRNA synthetase [Actinosynnema mirum DSM 43827]
          Length = 461

 Score = 74.4 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 58/443 (13%), Positives = 131/443 (29%), Gaps = 106/443 (23%)

Query: 270 RKGWKIFQTLISYMRRKIKDDYEEIN---TPQVLDQHLWQQSGHWD-------------- 312
             G ++   +       +    E++    +  +L + +W  SGH +              
Sbjct: 37  PLGVELKDNIKRQWWNFMVRGREDVVGLDSSVILPREVWTASGHVEAFVDPLVECNSCHK 96

Query: 313 SYRANMFAVKCADDTIKDLRTFALKPMNCPG----------------------------- 343
            +R +  + + A+ T KD+    +  + CP                              
Sbjct: 97  RFRQDTLSEEYAERTGKDVAEGDVSDVPCPNCGTRGQYTEPRMFNGLLKTHLGPVETEEG 156

Query: 344 ------------HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
                            N    S R+ P  + + G  +RNE +   + + R R F Q + 
Sbjct: 157 LHYLRPETAQGIFTNFLNVQTTSRRKPPFGIGQIGKSFRNEITPG-NFIFRTREFEQMEM 215

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
             F              +     Y + G     ++    P          +   +  K  
Sbjct: 216 EFFVEPGTDEQWHQYWIDERTRWYTELGISADNLRHYEHPA---------EKLSHYAKRT 266

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
           +D            G L G            + +    D    +     +L      ++ 
Sbjct: 267 VDIEYRFRFGGQEWGELEG------------IANRTDFDLTTHSNHSGVDLS-----YFD 309

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW----------------LSPIQA 555
            + + +  P +I     G     +  ++E +  +                    L+P++A
Sbjct: 310 QATNSRYRPFVIE-PAAGVGRPMMAFLLEAYTEDEAPNAKGGVDKRVVLRLDRRLAPVKA 368

Query: 556 IVTTITSSAV--EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
            V  ++ +A     A+++A  L+ H  ++E D     I  + R       P  +      
Sbjct: 369 AVLPLSRNADLSPKAKDLAAALRKH-WNVEFDDAGA-IGRRYRRQDEIGTPFCVTVDFDT 426

Query: 614 ASERSIGIRRFGSTTTQKVSLLD 636
            ++ ++ +R   + + ++VS+  
Sbjct: 427 LTDHAVTVRERDTMSQERVSMDQ 449


>gi|269219508|ref|ZP_06163362.1| glycine--tRNA ligase [Actinomyces sp. oral taxon 848 str. F0332]
 gi|269211087|gb|EEZ77427.1| glycine--tRNA ligase [Actinomyces sp. oral taxon 848 str. F0332]
          Length = 465

 Score = 74.0 bits (180), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 56/389 (14%), Positives = 124/389 (31%), Gaps = 49/389 (12%)

Query: 273 WKIFQTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           +++ Q    +  +K  +D + +   ++   +   +    +    NM           +  
Sbjct: 101 FRVDQIQEEFAAKKGIEDPDSVELAEIACGNCGTRGQWTEPRDFNMMLKTYLGPVEDESG 160

Query: 333 TFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
              L+P    G    F + + S  +  P  + + G  +RNE +   + + R R F Q + 
Sbjct: 161 LHYLRPETAQGIFVDFQNVMTSARKRPPFGIGQIGKSFRNEITPG-NFIFRTREFEQMEM 219

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
             F              +   + Y   G +   ++L   P+         +   +  K  
Sbjct: 220 EFFVKPGTDEEWHQYWIDERRNWYVGLGIDPENLRLYEHPQ---------EKLSHYSKRT 270

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
           +D          + G L G            + +    D    T     +L      ++ 
Sbjct: 271 VDIEYRFGFRGSDWGELEG------------IANRTDFDLSTHTKHSGKDLS-----YFD 313

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----------------LPLWLSPIQA 555
            +  E+  P +I     G     +  ++E +  +                L   LSP++A
Sbjct: 314 QASGERWIPYVIE-PAAGLTRSLMAFLVEAYAEDEAPNAKGGVDKRVVLRLDPRLSPVKA 372

Query: 556 IVTTITSSA--VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
            V  ++        A+E+A  L+ +  +++ D     +  + R       P  I      
Sbjct: 373 AVLPLSRDERLSPLARELAAELRKN-WNVDFDDAGA-VGRRYRRQDEIGTPFCITVDFDS 430

Query: 614 ASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             +R++ IR   +    ++ + D    L 
Sbjct: 431 LEDRAVTIRDRDTMEQVRLPIADVEGRLA 459


>gi|260578228|ref|ZP_05846146.1| glycine--tRNA ligase [Corynebacterium jeikeium ATCC 43734]
 gi|258603643|gb|EEW16902.1| glycine--tRNA ligase [Corynebacterium jeikeium ATCC 43734]
          Length = 484

 Score = 74.0 bits (180), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 58/345 (16%), Positives = 115/345 (33%), Gaps = 38/345 (11%)

Query: 307 QSGHWDSYRANMFAVKCADDTIKDLRTF-ALKPMNCPGHVAVFNH-GLKSYRELPVRLAE 364
           Q G W   +A    +K     + D      L+P    G    F +    S ++ P  +A+
Sbjct: 153 QPGAWTEPKAFSGLLKTFLGPVDDKEGLHYLRPETAQGIFTNFKNVMTTSRQKPPFGIAQ 212

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
            G  +RNE +   + + R R F Q +   F    +         +     Y D G +   
Sbjct: 213 VGKSFRNEITPG-NFIFRTREFEQMEMEFFVKPGEDEEWHQYWIDDRHQWYIDLGIKPEN 271

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG--AFYGPKF--- 479
           ++L   P+         +   +  K  +D       +    G L G      Y  +    
Sbjct: 272 LRLYEHPK---------EKLSHYSKRTVDVEYAFHFNGSKWGELEGVANRTDYDLRVHSE 322

Query: 480 ----EYILKDAIGRDWQCG-TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
               +    D    +     TI+    L     AF V++++E+  P        G+  R 
Sbjct: 323 GSGEDLSFYDQTTEERWIPYTIEPAAGLGRAMMAFLVDAYTEEEVPNAKG----GTDTRT 378

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAV--EYAQEIANLLKSHHLSIETDFRNETIN 592
           +          L   L+P++  V  ++        A++IA  L+    +++ D     I 
Sbjct: 379 V--------LKLDRRLAPVKIAVLPLSKKETLTPTAEKIAGQLRGF-WNVDYDTSGA-IG 428

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
            + R       P  +        + ++ +R   +   +++ + D 
Sbjct: 429 RRYRRQDEIGTPFCVTVDFDTLEDNAVTVRERDTMEQERIKIEDL 473


>gi|326798720|ref|YP_004316539.1| histidyl-tRNA synthetase [Sphingobacterium sp. 21]
 gi|326549484|gb|ADZ77869.1| Histidyl-tRNA synthetase [Sphingobacterium sp. 21]
          Length = 463

 Score = 74.0 bits (180), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 69/455 (15%), Positives = 124/455 (27%), Gaps = 100/455 (21%)

Query: 275 IFQTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           IF T+    R+     Y+EI TP   +            Y      +        D   F
Sbjct: 26  IFNTIKDVFRK---YGYQEIQTPSFENLQTLT-----GKYGEEGDKLIFKILNSGD---F 74

Query: 335 ALKPMNCPGHVAVFNH-----------------------GLKSYRELPVRLAEFGSVYRN 371
             K           N                          ++   LP +  +   V+R 
Sbjct: 75  ISKISAEKFATLHSNSITPLIAEKALRYDLTVPFARYVVMHQNEITLPFKRFQIQPVWRA 134

Query: 372 EPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP 431
           +         R R F Q DA      E + NE  +   +        G +  ++KL+ R 
Sbjct: 135 DRPQR----GRYREFYQCDA-DVVGSESLLNEA-EFILVYQEALSSLGLKDFVIKLNNRK 188

Query: 432 EKR-----VGSDALWDDAENI--------------------------------------- 447
                   +G   L  D                                           
Sbjct: 189 LLAGIADIIGKPELLIDMTVAIDKLDKIGLVGVKQELAAKGFSTEELAMLDPIITLSGSN 248

Query: 448 ------MKGVLD--TIKNSSQDRINTGVLLGEG--AFYGPKFEYILKDAIGRDWQCGTIQ 497
                 +K VL    +     + I   +   +   A   P  E  +  A G ++  G+I 
Sbjct: 249 VDKLATLKEVLKSSEMGQKGIEEIEMVLAYAQKLDANALPYIEVDITLARGLNYYTGSIF 308

Query: 498 VDFNLPSRFNAFYVNSH-----SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
                     +                P +    +    +R   +++E            
Sbjct: 309 EVKTNEVSMGSIGGGGRYDDLTGMFGLPGLTGVGISFGADRIYDVLLE-LDLFPESTTKT 367

Query: 553 IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
            Q +VT    S  +YA  +   L+ + ++ E       +  ++     KKIP +I  G +
Sbjct: 368 TQVLVTNFDQSTEDYALSLLQTLRKNGIASELYPVAAKLKKQLTYADQKKIPYVIFIGAE 427

Query: 613 EASERSIGIRRFGSTTTQKVSLLDAIPILTKESLP 647
           E S   + I++  +   +K++  D    L   + P
Sbjct: 428 ELSSGMLTIKKMITGEQEKMAADDLFSYLINTADP 462


>gi|21220965|ref|NP_626744.1| glycyl-tRNA synthetase [Streptomyces coelicolor A3(2)]
 gi|256787874|ref|ZP_05526305.1| glycyl-tRNA synthetase [Streptomyces lividans TK24]
 gi|289771758|ref|ZP_06531136.1| glycyl-tRNA synthetase [Streptomyces lividans TK24]
 gi|11387143|sp|Q9L2H9|SYG_STRCO RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|6752347|emb|CAB69725.1| glycyl-tRNA synthetase [Streptomyces coelicolor A3(2)]
 gi|289701957|gb|EFD69386.1| glycyl-tRNA synthetase [Streptomyces lividans TK24]
          Length = 460

 Score = 74.0 bits (180), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 52/321 (16%), Positives = 97/321 (30%), Gaps = 23/321 (7%)

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
                T        L+P    G    F      S R+ P  +A+ G  +RNE +   + +
Sbjct: 145 THLGPTQDSGSVAYLRPETAQGIFTNFAQVQTTSRRKPPFGIAQMGKSFRNEITPG-NFI 203

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            R R F Q +   F    +             + Y   G  +  ++    P         
Sbjct: 204 FRTREFEQMEMEFFVKPGEDEKWQEYWMEQRWNWYTGLGLREENMRWYEHPA-------- 255

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDF 500
            +   +  K   D     S      G L G             K A G+D        D 
Sbjct: 256 -EKLSHYSKRTADIEYRFSFGGSEWGELEGVANRTDYDLSSHAK-ASGQDLS----YYDQ 309

Query: 501 NLPSRFNAFYVNSHSEKCHPVM---IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIV 557
               R+  + +   +     ++   +   +        G + +     L   LSP++  V
Sbjct: 310 EAQERWTPYVIEPAAGVGRAMLAFLLDAYIEDEAPNAKGKLEKRTVLRLDPRLSPVKVAV 369

Query: 558 TTIT--SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEAS 615
             ++        A+ +A  L+  + +IE D     I  + R       P  +        
Sbjct: 370 LPLSRNPELSPKAKGLAQALR-QNWNIEFDDAGA-IGRRYRRQDEIGTPFCVTVDFDTLD 427

Query: 616 ERSIGIRRFGSTTTQKVSLLD 636
           + ++ +R   +   ++VSL  
Sbjct: 428 DNAVTVRERDTMKQERVSLDQ 448


>gi|326202063|ref|ZP_08191933.1| LOW QUALITY PROTEIN: glycyl-tRNA synthetase [Clostridium
           papyrosolvens DSM 2782]
 gi|325987858|gb|EGD48684.1| LOW QUALITY PROTEIN: glycyl-tRNA synthetase [Clostridium
           papyrosolvens DSM 2782]
          Length = 462

 Score = 74.0 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 47/334 (14%), Positives = 104/334 (31%), Gaps = 30/334 (8%)

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEP 373
           + N+        T        L+P    G    F +  ++  +++P  + + G  +RNE 
Sbjct: 150 KFNLMFKTFQGVTEDSKAEIFLRPETAQGIFVNFKNVQRTTRKKIPFGIGQIGKSFRNEI 209

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP 431
           +   +   R R F Q +   FC    +  + +  K       +  +   E + ++   + 
Sbjct: 210 TPG-NFTFRTREFEQMELEFFCEPGKDLEWFKYWKDFCYNWLLSLNMTKENLKLRDHEKE 268

Query: 432 EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG-PKFEYILKDAIGRD 490
           E    S+A  D         L          I               K +    D    +
Sbjct: 269 ELSHYSNATTDI------EFLFPFGWGELWGIADRTDFDLKQHMTHAKDDLSYFDPTTNE 322

Query: 491 WQCGT-IQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW 549
                 I+          AF  ++++E+     +      ++ RF               
Sbjct: 323 KYVPYCIEPSLGADRVTLAFLCDAYNEEE----VSEGDVRTVLRFH------------PA 366

Query: 550 LSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIIC 609
           ++P++  V  ++    E A+++ ++L       E D    +I  + R       P  I  
Sbjct: 367 IAPVKIAVLPLSKKLGEEAEKVYHMLTKT-FYCEYDETG-SIGKRYRRQDEIGTPYCITF 424

Query: 610 GDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
                 ++S+ IR   +    ++ + +       
Sbjct: 425 DFDSLEDKSVTIRERDTMQQVRIKIDELAAYFEN 458


>gi|84496816|ref|ZP_00995670.1| glycyl-tRNA synthetase [Janibacter sp. HTCC2649]
 gi|84383584|gb|EAP99465.1| glycyl-tRNA synthetase [Janibacter sp. HTCC2649]
          Length = 471

 Score = 74.0 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 58/357 (16%), Positives = 113/357 (31%), Gaps = 50/357 (14%)

Query: 307 QSGHWDSYRANMFAVKCADDTIKDLRTFAL-KPMNCPGHVAVFNH-GLKSYRELPVRLAE 364
             G W   R     +K     I+D +  A  +P    G    F +    S ++ P  +A+
Sbjct: 140 TRGQWTEAREFNMMLKTHLGVIEDDKGLAYLRPETAQGIFINFLNVMQTSRKKPPFGIAQ 199

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
            G  +RNE +   + + R R F Q +   F              +     Y D G     
Sbjct: 200 TGKSFRNEITPG-NFIFRTREFEQMEMEFFVKPGDDVEWHQYWIDERTRWYVDLGINPDN 258

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           ++    P          D   +     +D     +      G L G       + ++ LK
Sbjct: 259 LRHFEHPA---------DKLSHYSTRTVDIEYRFNFAGSEWGELEGIAN----RTDFDLK 305

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
                                   F+  +  EK  P +I     G     +  +++ +  
Sbjct: 306 THTEHSGT-------------DLLFFDQTTGEKYTPYVIE-PAAGLSRSLMTFLVDAYAE 351

Query: 545 NLPLW----------------LSPIQAIVTTITSSAV--EYAQEIANLLKSHHLSIETDF 586
           +                    L+P++A V  ++ +A     A+++A  L+ H  +++ D 
Sbjct: 352 DEAPNTKGGVDKRVVLKLDRRLAPVKAAVLPLSRNADLSPKARDLAATLRKH-WNVDFDD 410

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
               I  + R       P  I        ++++ IR   +   ++V+L      L +
Sbjct: 411 AGA-IGKRYRRQDEIGTPFCITVDFDTLDDQAVTIRERDTMAQERVALDQVEGYLAQ 466


>gi|298491438|ref|YP_003721615.1| histidyl-tRNA synthetase ['Nostoc azollae' 0708]
 gi|298233356|gb|ADI64492.1| histidyl-tRNA synthetase ['Nostoc azollae' 0708]
          Length = 462

 Score = 74.0 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 56/453 (12%), Positives = 136/453 (30%), Gaps = 74/453 (16%)

Query: 261 DGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDS---YRA 316
             SG   +     ++   L+  +RR  +   +  I TP V    + Q  G+      Y  
Sbjct: 11  TPSGFPEFLPSEKRLEVYLLDIIRRVFESYGFTPIETPAVERLEVLQAKGNQGDNIIYGI 70

Query: 317 N--MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL--PVRLAEFGSVYRNE 372
           +  +   + A+           + +     V    +  +   EL  P    +   V+R E
Sbjct: 71  DPILPPNRQAEKDKSGETALEARALKFDQTVPFAAYIARHLNELTFPFSRYQMDMVFRGE 130

Query: 373 PSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP- 431
            +       R R F Q D  V    +       ++  +I  I++        ++++ R  
Sbjct: 131 RAKD----GRFRQFRQCDIDVVARGKLSLLYDAQMPAIITEIFEAINIGDFAIRINNRKI 186

Query: 432 -EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG-------EGAFYGPKFEYIL 483
                 S  + ++       ++D ++   + ++ + +          E      K +  +
Sbjct: 187 LTGFFQSVEVPENQIKACIAIIDNLEKIGEAKVKSELEKEGISSEQTEKIIEFIKIDGSV 246

Query: 484 KDAIGRDWQCGTIQVDFNLP---------------------SRFNAF------------Y 510
            D + +         +                          RF                
Sbjct: 247 DDVLDKLNHLAQSFPEAEQFNLGVTELATVINGVRDLGVADKRFCIDLSIARGLNYYTGT 306

Query: 511 VNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL-------------------- 550
           V   +   H  +      G  E  +G+ +      + + +                    
Sbjct: 307 VYETTLIGHEALGSICSGGRYEELVGMFLGEKMPGVGISIGLTRLISRLLKAGILNTLSA 366

Query: 551 SPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           +P Q +V  +    +    +++  L+   +++ T+F    +  + +    + I   +I G
Sbjct: 367 TPTQVVVVNMQEDLIAVYLKVSQQLRQAGINVVTNFEKRPLGKQFQAADKQGIQFCVIIG 426

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             EA+ +   ++   S    +V+L D    + +
Sbjct: 427 ADEAAAQKSSLKNLKSGEQVEVALADLAEEIKR 459


>gi|159901209|ref|YP_001547456.1| glycyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
 gi|159894248|gb|ABX07328.1| glycyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
          Length = 459

 Score = 74.0 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 59/352 (16%), Positives = 114/352 (32%), Gaps = 41/352 (11%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPS 374
            N+          ++     L+P    G    F + +  + R LP  +A+ G  +RNE +
Sbjct: 122 FNLMFKTAVGPIAEEGSFAYLRPETAQGIFTNFKNVVDATSRRLPFGIAQIGKAFRNEIT 181

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              + + RVR F Q +   F           +     +  ++D G     ++   +    
Sbjct: 182 PR-NFIFRVREFEQMELEFFVQPGTDDEWHSQWVEARLQWWRDQGLLSENLQAYHQAG-- 238

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
              D L   A    K  +D +      +   G+   EG      F+       G+     
Sbjct: 239 ---DELAHYA----KATVDIL-----YQFPHGLEELEGIANRTDFDLG-SHTRGQADLGL 285

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG---------- 544
           + +VD N  S       +  ++K     +     G     + I+ E F            
Sbjct: 286 SAKVDPNEDSTAKLTIPHPETQKPLVPFVIEPSAGVDRGVLAILTEAFTKETLENGSERI 345

Query: 545 --NLPLWLSPIQAIVTT---ITSSAVEYAQEIANLLKSHHL-SIETDFRNETINYKIREH 598
              L   L+PI+  V          VE A+ I +LL +  +  I  +     I    R H
Sbjct: 346 VLKLKPHLAPIKVAVLPLARNKPEIVEKAKAIKSLLMATGIGRIFYEDTGN-IGKGYRRH 404

Query: 599 SIKKIPIIIIC-------GDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
                P  +         GD  +   ++ +R   + +  ++ + +    + +
Sbjct: 405 DEVGTPFCVTVDFDTLGRGDDASLLDTVTVRDRDTMSQVRIHINELASYIRE 456


>gi|86130875|ref|ZP_01049474.1| glycyl-tRNA synthetase [Dokdonia donghaensis MED134]
 gi|85818286|gb|EAQ39446.1| glycyl-tRNA synthetase [Dokdonia donghaensis MED134]
          Length = 511

 Score = 74.0 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 55/353 (15%), Positives = 115/353 (32%), Gaps = 51/353 (14%)

Query: 308 SGHWDSYRA-NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEF 365
           S +W   +  N+        +        L+P    G    F +  K+   ++P  +A+ 
Sbjct: 186 SKNWTDVKQFNLMFGTKLGASADSAMDLYLRPETAQGIFVNFLNVQKTGRMKIPFGIAQT 245

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
           G  +RNE   +   + R+R F Q +   F                 +  +   G  +   
Sbjct: 246 GKAFRNEIV-ARQFIFRMREFEQMEMQFFIKPGTQGEWYKHWKETRMKWHLSLGMGEDNY 304

Query: 426 KLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKD 485
           +     +    +DA  D                 + +   G    EG     + ++ LK 
Sbjct: 305 RFHDHEKLAHYADAAADI----------------EFKFPFGFKELEGIH--SRTDFDLK- 345

Query: 486 AIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI----MIEN 541
               +     +Q              +  +    P ++  ++ G    F+ +    ++E 
Sbjct: 346 -AHEEHSGKKLQYFD-----------HEDNASYTPYVLETSI-GLDRMFLAVFSNSLVEE 392

Query: 542 --------FKGNLPLWLSPIQAIV--TTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
                       LP  L+P++A V          E A++I + LK +  ++  D ++  +
Sbjct: 393 ELENNTTRTVLKLPAVLAPVKAAVFPLVKKDGLPEVAKQIIDDLK-YDFNVFYDEKDA-V 450

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
             + R       P  I        ++ + IR   +   ++V + D   I+ KE
Sbjct: 451 GKRYRRQDANGTPFCITVDHDTLEDKMVTIRHRDTMEQKRVLITDLAAIIDKE 503


>gi|329116627|ref|ZP_08245344.1| serine--tRNA ligase [Streptococcus parauberis NCFD 2020]
 gi|326907032|gb|EGE53946.1| serine--tRNA ligase [Streptococcus parauberis NCFD 2020]
          Length = 425

 Score = 74.0 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 38/222 (17%), Positives = 86/222 (38%), Gaps = 20/222 (9%)

Query: 242 EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINT 296
           E + H ++   +D+          G+  +F+   G ++ + + ++M     K+ Y+EI T
Sbjct: 136 EAKPHWEIGENLDILDWERGAKVTGARFLFYKNLGARLERAIYNFMLDEHGKEGYQEIIT 195

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +++      +G +  ++ + F +K  +        F L P         +   +   +
Sbjct: 196 PYMVNHDSMFGTGQYPKFKEDTFELKDTN--------FVLIPTAEVPLTNYYRGEILEGK 247

Query: 357 ELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           ELP+        +R+E   +     GL+R+  F + +   F   E+ + E  K+     +
Sbjct: 248 ELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESYEELEKMTANAEN 307

Query: 414 IYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
           I +       ++ L T              +W  A+N  + +
Sbjct: 308 ILQKLNLPYRVITLCTGDMGFSAAKTYDIEVWIPAQNTYREI 349


>gi|291087654|ref|ZP_06347045.2| alanine--tRNA ligase [Clostridium sp. M62/1]
 gi|291074356|gb|EFE11720.1| alanine--tRNA ligase [Clostridium sp. M62/1]
          Length = 868

 Score = 74.0 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 33/143 (23%), Positives = 64/143 (44%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFS 115
             + +   ++ R L    HS  H++ +A++++        G  + +D   +DF      +
Sbjct: 537 DQVTLTVNKENRELTARNHSATHLLHKALRTVLGTHVEQAGSLVTKDRLRFDFTHFSAMT 596

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            DE+A +EK + + IA   P +   +S E+A++         K          E+V + R
Sbjct: 597 PDEIAAVEKMVNDEIAASLPVVTDIMSLEEAKKTGAMALFGEKY--------GESVRVVR 648

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G++  +LC G HV +T  +  F
Sbjct: 649 MGDFSTELCGGTHVPNTSTISAF 671


>gi|220918948|ref|YP_002494252.1| cyclic nucleotide-binding protein [Anaeromyxobacter dehalogenans
           2CP-1]
 gi|219956802|gb|ACL67186.1| cyclic nucleotide-binding protein [Anaeromyxobacter dehalogenans
           2CP-1]
          Length = 715

 Score = 74.0 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 43/192 (22%), Positives = 77/192 (40%), Gaps = 7/192 (3%)

Query: 12  GSIKNFPVHATGSDVA-ESISRSLAKKAVAVAINGKVCDLSDPV-REGSIEIITPEDPRS 69
           G  +         D+  E+I   L    VA  +  K   L+ PV  + ++  +T      
Sbjct: 169 GEARRIRTGTRVRDLLPEAIEGDL---VVAGLLGQKPVSLATPVFTDTTVAPLTVSHWEG 225

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKK-MQE 128
             V  HS   ++ EA   + P ++V +GP +        +         LA      M+ 
Sbjct: 226 RQVYAHSLGLVLLEAAHQVAPALRVRMGPSLGVRQLVVVEGAGGEDRAALAARLAAGMER 285

Query: 129 IIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           I+A D+PF  +Y S ++A+  F  +  +    +L  +  +  V L   G+ + L  GP +
Sbjct: 286 IVAADAPFRSEYWSTDEAQGWFLERGWSDAARLL-RVRRQATVRLVSCGDVYALSMGPLL 344

Query: 189 RSTGQVKKFFKL 200
            STG +  +   
Sbjct: 345 PSTGALHGWTLE 356


>gi|312867885|ref|ZP_07728090.1| serine--tRNA ligase [Streptococcus parasanguinis F0405]
 gi|311096640|gb|EFQ54879.1| serine--tRNA ligase [Streptococcus parasanguinis F0405]
          Length = 425

 Score = 74.0 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 86/222 (38%), Gaps = 20/222 (9%)

Query: 242 EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINT 296
           E + H  L  ++D+          G+  +F+   G ++ + + ++M     K+ Y E+ T
Sbjct: 136 EPKAHWDLGEDLDILDWERGAKVTGARFLFYKGLGARLERAIYNFMLDEHGKEGYTEVIT 195

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +++      +G +  ++ + F +   +        + L P         +   +   +
Sbjct: 196 PYMVNHDSMFGTGQYPKFKEDTFELSDTN--------YVLIPTAEVPLTNYYRDEILDGK 247

Query: 357 ELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           +LP+        +R+E   +     GL+R+  F + +   F   E+ ++E  K+     +
Sbjct: 248 DLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESYDELEKMVVNAEN 307

Query: 414 IYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
           I +       +V LST              +W  A+N  + +
Sbjct: 308 ILQKLNLPYRVVALSTGDMGFSAAKTYDLEVWIPAQNTYREI 349


>gi|118465900|ref|YP_881257.1| glycyl-tRNA synthetase [Mycobacterium avium 104]
 gi|118167187|gb|ABK68084.1| glycyl-tRNA synthetase [Mycobacterium avium 104]
          Length = 459

 Score = 74.0 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 52/342 (15%), Positives = 109/342 (31%), Gaps = 22/342 (6%)

Query: 307 QSGHWDS-YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAE 364
           + G W      NM           +     L+P    G    F + + +  ++ P  + +
Sbjct: 128 EPGRWTEPREFNMMLKTYLGPIETEEGLHYLRPETAQGIFVNFANVVTTARKKPPFGIGQ 187

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
            G  +RNE +   + + R R F Q +   F              +  +  Y + G +   
Sbjct: 188 IGKSFRNEITPG-NFIFRTREFEQMEMEFFVEPSTAKEWHQYWIDTRLQWYVELGIDPQN 246

Query: 425 VKLSTRPEKRV--GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           ++L   P  ++   SD   D             +           L       G    + 
Sbjct: 247 LRLFEHPADKLSHYSDRTVDIEYKFGFAGNPWGELEGVANRTDFDLSTHSKHSGVDLSFY 306

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
            +    R      I+    L   F AF ++++ E   P    +    ++ R         
Sbjct: 307 DQATDSRYIP-YVIEPAAGLTRSFMAFLIDAYVEDEAPNAKGKMEKRTVLRL-------- 357

Query: 543 KGNLPLWLSPIQAIVTTIT--SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
                  L+P++A V  ++  +     A+++A  L+    +IE D     I  + R    
Sbjct: 358 ----DPRLAPVKAAVLPLSRHADLSPKARDLAAELRRF-WNIEFDDAGA-IGRRYRRQDE 411

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
              P  +        + ++ +RR    + +++ +      L+
Sbjct: 412 IGTPFCVTVDFDSLEDNAVTVRRRDDMSQERIGMDAVADYLS 453


>gi|254774762|ref|ZP_05216278.1| glycyl-tRNA synthetase [Mycobacterium avium subsp. avium ATCC
           25291]
          Length = 463

 Score = 74.0 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 52/342 (15%), Positives = 109/342 (31%), Gaps = 22/342 (6%)

Query: 307 QSGHWDS-YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAE 364
           + G W      NM           +     L+P    G    F + + +  ++ P  + +
Sbjct: 132 EPGRWTEPREFNMMLKTYLGPIETEEGLHYLRPETAQGIFVNFANVVTTARKKPPFGIGQ 191

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
            G  +RNE +   + + R R F Q +   F              +  +  Y + G +   
Sbjct: 192 IGKSFRNEITPG-NFIFRTREFEQMEMEFFVEPSTAKEWHQYWIDTRLQWYVELGIDPQN 250

Query: 425 VKLSTRPEKRV--GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           ++L   P  ++   SD   D             +           L       G    + 
Sbjct: 251 LRLFEHPADKLSHYSDRTVDIEYKFGFAGNPWGELEGVANRTDFDLSTHSKHSGVDLSFY 310

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
            +    R      I+    L   F AF ++++ E   P    +    ++ R         
Sbjct: 311 DQATDSRYIP-YVIEPAAGLTRSFMAFLIDAYVEDEAPNAKGKMEKRTVLRL-------- 361

Query: 543 KGNLPLWLSPIQAIVTTIT--SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
                  L+P++A V  ++  +     A+++A  L+    +IE D     I  + R    
Sbjct: 362 ----DPRLAPVKAAVLPLSRHADLSPKARDLAAELRRF-WNIEFDDAGA-IGRRYRRQDE 415

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
              P  +        + ++ +RR    + +++ +      L+
Sbjct: 416 IGTPFCVTVDFDSLEDNAVTVRRRDDMSQERIGMDAVADYLS 457


>gi|218885980|ref|YP_002435301.1| alanyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|218756934|gb|ACL07833.1| alanyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 879

 Score = 74.0 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 66/156 (42%), Gaps = 14/156 (8%)

Query: 43  INGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIE 101
           ++G++      + +  + +   ED R  +   H+C H++  A++ +  +     G  +  
Sbjct: 544 VDGEI------LPDQEVHLQVEEDERVASARNHTCTHLLHAALRRVLGDHVKQAGSLVAP 597

Query: 102 DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEI 161
           D   +DF      + +E+A +E+++  +I  + P    +++++ A           K   
Sbjct: 598 DRLRFDFTHIAAMTPEEIAAVEREVNRVILANLPLETDHMAYDAALTRGAMALFGEKY-- 655

Query: 162 LESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
                  E   +    E  +LC G H+R+TGQ   F
Sbjct: 656 -----GDEVRVVAIADESVELCGGTHLRATGQAGLF 686


>gi|320535809|ref|ZP_08035890.1| glycyl-tRNA synthetase [Treponema phagedenis F0421]
 gi|320147357|gb|EFW38892.1| glycyl-tRNA synthetase [Treponema phagedenis F0421]
          Length = 452

 Score = 74.0 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 62/441 (14%), Positives = 134/441 (30%), Gaps = 88/441 (19%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEIN---TPQVLDQHLWQQSGHWDSY---- 314
            +G   +   G ++   +     +++   ++ I       ++   +W+ SGH +++    
Sbjct: 33  QNGAWDYGPLGIELKNNISRAWWKEMTQLHDNIVGLDAAILMHPRVWEASGHVENFTDPL 92

Query: 315 ------------------------------------RANMFAVKCADDTIKDLRTFALKP 338
                                               + N+        T  +     L+P
Sbjct: 93  VDCKKCKARFRADQMDQEKLAKKICPECGGELTDTRKFNLMFKTHIGATDDNSSLIYLRP 152

Query: 339 MNCPGHVAVFNHGLKSYR-ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK 397
               G    + +  +S R ++P  +A+ G  +RNE   + + + R   F Q +   F   
Sbjct: 153 ETAQGIYVNYKNVAQSNRLKIPFGIAQIGKAFRNEIV-TKNFIFRTCEFEQMEMQFFVKP 211

Query: 398 --EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTI 455
             +  + E  K      + Y+  G     ++         G D L   A+       D  
Sbjct: 212 GTDDEWFEYWK--KQRWAFYEKHGVRMHKLRWHQH-----GPDELAHYAK-------DAF 257

Query: 456 KNSSQDRINTGVLLG-----------EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPS 504
               +  +    L G              + G   +YI +D     +    I+    L  
Sbjct: 258 DIEYEFPMGFKELEGVHNRTDFDLTRHTQYSGKDLQYIDQDNNNERYIPYIIETSAGLTR 317

Query: 505 RFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTI--TS 562
               F  +++ E+      +   + ++ RF               ++PI   V  +    
Sbjct: 318 NLLMFICDAYEEEKVADKGNADDWRTVLRFH------------PLIAPITVAVLPLMKKD 365

Query: 563 SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
              E A+EI N L+S     + D     I  + R       P  I        + ++ +R
Sbjct: 366 GLAELAEEIRNELRSE-FKTDFDLSGA-IGKRYRRQDEAGTPFCITVDYDSKKDGTVTLR 423

Query: 623 RFGSTTTQKVSLLDAIPILTK 643
              S    ++   + +  + +
Sbjct: 424 FRDSMEQIRIPRSEIVNTIRQ 444


>gi|282878742|ref|ZP_06287510.1| glycine--tRNA ligase [Prevotella buccalis ATCC 35310]
 gi|281299133|gb|EFA91534.1| glycine--tRNA ligase [Prevotella buccalis ATCC 35310]
          Length = 533

 Score = 74.0 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 55/345 (15%), Positives = 112/345 (32%), Gaps = 54/345 (15%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+                 L+P    G    + +  K+   +LP  +A+ G  +RNE  
Sbjct: 194 FNLMFSTEMGSLSDATNKIYLRPETAQGIFVNYLNVQKTGRMKLPFGIAQIGKAFRNEIV 253

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
            +   + R+R F Q +   F     E  + +  K   +       FG E        +  
Sbjct: 254 -ARQFIFRMREFEQMEMQFFVKPGTELEWFKQWKQTRMAWHQALGFGAENYRFHDHEKLA 312

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
                    + A +I            + ++  G    EG      F+            
Sbjct: 313 HYA------NAATDI------------EFKMPFGFKEVEGIHSRTNFD------------ 342

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK--------- 543
              +        +   ++    SE   P +I  ++ G    F+ +M  +++         
Sbjct: 343 ---LSQHEKFSGKNLKYFDPETSESYVPYVIETSI-GVDRMFLSVMCHSYQEEELENGEK 398

Query: 544 ---GNLPLWLSPIQAIVTTITSSAV--EYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
                LP  L+P++  V  +       E A+EI +LLK  H +   D ++ +I  + R  
Sbjct: 399 RVVLRLPAALAPVKCAVMPLVRKEGLPEKAREIVDLLK-FHFNTSYDEKD-SIGKRYRRQ 456

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
                P  +        +  + +R   +   Q+V + +   ++ +
Sbjct: 457 DAVGTPYCVTVDFDTLEDNKVTLRHRDTMEQQRVDISELCSVIEE 501


>gi|260433747|ref|ZP_05787718.1| alanyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157]
 gi|260417575|gb|EEX10834.1| alanyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157]
          Length = 890

 Score = 74.0 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 36/144 (25%), Positives = 61/144 (42%), Gaps = 5/144 (3%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSD 117
           +E+      RS     HS  H++ EA++    E     G     D   +DF   +  + +
Sbjct: 551 VELEVDHARRSAIRANHSATHLLHEALRETLGEHVAQRGSLNAADRLRFDFSHTKAMTPE 610

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKAREL--FESKKEAYKVEILESIPAKENVTLYR 175
           E+  +E+++   I ++SP   + ++ + AR+L       E Y  E+      K       
Sbjct: 611 EIETVEREVNAFIRQNSPVETRIMTPDDARKLGAQALFGEKYGDEVRVVSMGKAPTGKGH 670

Query: 176 QGE--WFDLCRGPHVRSTGQVKKF 197
            GE    +LC G HVR TG +  F
Sbjct: 671 DGETWSIELCGGTHVRQTGDIGTF 694


>gi|256820207|ref|YP_003141486.1| glycyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271]
 gi|256581790|gb|ACU92925.1| glycyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271]
          Length = 516

 Score = 74.0 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 59/392 (15%), Positives = 124/392 (31%), Gaps = 56/392 (14%)

Query: 271 KGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRA-NMFAVKCADDTIK 329
           +G +I   L   + ++   D  +    ++        S +W   +  N+        +  
Sbjct: 150 RGEEILHRLGKSLEKEDLAD-VKALIEELEIADPETGSRNWTDVKQFNLMFGTKIGASAD 208

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQ 388
                 L+P    G    F +  KS   ++P  +A+ G  +RNE   +   + R+R F Q
Sbjct: 209 ASMDLYLRPETAQGIFVNFLNVQKSGRMKIPFGIAQTGKAFRNEIV-ARQFIFRMREFEQ 267

Query: 389 DDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
            +   F     +Q + E  K   L   +    G E        +                
Sbjct: 268 MEMQFFIKPGTQQKWYEYWKETRLKWHLSLGMGEENYRYHPHEKLAHYAD---------- 317

Query: 447 IMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF 506
                 D      + R   G    EG      F+          +    +Q         
Sbjct: 318 ---AACDI-----EFRFPFGFKELEGIHSRTNFDL----GNHEKYSGKKMQYFD------ 359

Query: 507 NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI-----ENFKG-------NLPLWLSPIQ 554
                   ++   P ++  ++ G    F+ +       E  +G        LP  L+P +
Sbjct: 360 -----PEENKSYTPYVLETSI-GLDRMFLAVFSNSLQEEALEGGDTRTVLRLPFVLAPTK 413

Query: 555 AIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
             V  +       E A++I N LK +  ++  D ++  +  + R       P  +    +
Sbjct: 414 VAVLPLLKKDGLPEVAEQIVNELK-YDFNVAYDEKDA-VGRRYRRQDAVGTPFCVTVDHQ 471

Query: 613 EASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
              + ++ +R   +    ++++ +    + KE
Sbjct: 472 TLEDNTVTLRHRDTMEQVRIAIPELRNTIAKE 503


>gi|213963286|ref|ZP_03391543.1| glycyl-tRNA synthetase [Capnocytophaga sputigena Capno]
 gi|213954148|gb|EEB65473.1| glycyl-tRNA synthetase [Capnocytophaga sputigena Capno]
          Length = 516

 Score = 74.0 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 58/394 (14%), Positives = 128/394 (32%), Gaps = 32/394 (8%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
                   V+ + ++G +I   L   + ++   D  +    ++        S +W   + 
Sbjct: 136 QFVTTNPRVLEYKQRGEEILHRLGKSLEKEDLAD-VKALIEELEIADPETGSRNWTDVKQ 194

Query: 317 -NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        +        L+P    G    F +  KS   ++P  +A+ G  +RNE  
Sbjct: 195 FNLMFGTKIGASADASMDLYLRPETAQGIFVNFLNVQKSGRMKIPFGIAQTGKAFRNEIV 254

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
            +   + R+R F Q +   F     +Q + E  K   L   +    G E        +  
Sbjct: 255 -ARQFIFRMREFEQMEMQFFIKPGTQQQWYEYWKETRLKWHLSLGMGEENYRYHPHEKLA 313

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
               +    +         L+ I + +   +      G    Y  K +    D   +   
Sbjct: 314 HYADAACDIEFRFPFGFKELEGIHSRTNFDL------GNHEKYSGK-KMQYFDPEEKVSY 366

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
              +        R      ++  ++        A+ G   R +          LP  L+P
Sbjct: 367 TPYVLETSIGLDRMFLAVFSNSLQEE-------ALEGGDTRTV--------LRLPFVLAP 411

Query: 553 IQAIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
            +  V  +       E A++I N LK +  ++  D ++  +  + R       P  +   
Sbjct: 412 TKVAVLPLLKKDGLPEVAEQIVNELK-YDFNVAYDEKDA-VGRRYRRQDAVGTPFCVTVD 469

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
            +   + ++ +R   +    ++++ +    + KE
Sbjct: 470 HQTLEDNTVTLRHRDTMEQVRIAIPELRATIAKE 503


>gi|229543723|ref|ZP_04432783.1| histidyl-tRNA synthetase [Bacillus coagulans 36D1]
 gi|229328143|gb|EEN93818.1| histidyl-tRNA synthetase [Bacillus coagulans 36D1]
          Length = 427

 Score = 74.0 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 60/412 (14%), Positives = 126/412 (30%), Gaps = 55/412 (13%)

Query: 276 FQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           +  + +  ++  ++  Y EI TP      L+Q+         ++   +      +  R+ 
Sbjct: 20  WNYIENTAKKICENYQYREIRTPIFEYTELFQKG---VGDTTDIVQKEMYTFDDRGGRSL 76

Query: 335 ALKPM-NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
            L+P    P   +   H +      PV+L   G ++R E   +     R R F Q     
Sbjct: 77  TLRPEGTAPVVRSFIGHKMFGNTVQPVKLYYNGPMFRYERPQA----GRFRQFVQFGVEA 132

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKI--------------MVKLSTRPEKRVGSDA 439
             +++   +   ++  L + IYK  G + +                + +     +     
Sbjct: 133 LGSEDPAIDA--EVIALAMDIYKQLGLKNVKLVINSLGDKESRLRHREALIDHFKPHIGE 190

Query: 440 LWDDAENIMKG----VLDTIKN------SSQDRINTGVLLGEGAFY----------GPKF 479
              D +  ++     +LD  K+       +   I   +     A++          G  +
Sbjct: 191 FCADCQKRLEQNPLRILDCKKDHDHPLMKTAPSILDYLNDASKAYFDKVLQFLGTLGIPY 250

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS--------EKCHPVMIHRAVFGSI 531
           E       G D+   T     +    F A               E   P         SI
Sbjct: 251 EIDPGLVRGLDYYVHTCFEIMSNAEGFGAITTLCGGGRYNGLVEEMGGPETPGIGFALSI 310

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           ER +  +  + +G            V  I       A ++   L+S   S + D+    +
Sbjct: 311 ERLLAAL--DAEGIELPVGHRTDCYVVAIGEETKPAAFKLLQALRSAGFSADQDYLGRKV 368

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             + +     K   + + G++E       +R   +   +++ L   I     
Sbjct: 369 KAQFKAADRVKAAFVAVIGEEELRAGKASVRNMATGEQKELPLEGFITAFKD 420


>gi|71029934|ref|XP_764609.1| prolyl-tRNA synthetase [Theileria parva strain Muguga]
 gi|68351565|gb|EAN32326.1| prolyl-tRNA synthetase, putative [Theileria parva]
          Length = 461

 Score = 74.0 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 53/349 (15%), Positives = 109/349 (31%), Gaps = 54/349 (15%)

Query: 269 HRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
              G +I   + +  +    K    +++ P +  +          +    +        +
Sbjct: 83  LPLGHRIINRITNIFKVELCKLGAAQLSFPLLNPE------KVVSNTGNTVLDNDLFKVS 136

Query: 328 IKDLRTFALKPMNCPGHVAVFNHG--LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRG 385
                 + L          V  +     S  +LPV L +  + +R+E      G +R++ 
Sbjct: 137 GNGSVEYRLSGTCEDLCNIVLKNEMIPLSKLQLPVLLYQINTKFRDELR-VNEGKVRLKE 195

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
           F   D +   + EQ  +    +     +                +    + SD L     
Sbjct: 196 FLMLDMYSLHSSEQCSDSTYTLVLESFANVLRLLGLNFATVNCNKNN--IVSDEL----- 248

Query: 446 NIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSR 505
                    +++S     N+   L  G  +  KF     D  G  ++             
Sbjct: 249 --------RVQHSHNHDQNSNTELEVGHLF--KFGTHYSDVYGLKFEIS----------- 287

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL----SPIQAIVTTIT 561
                      K   + ++    G I R + ++I N+     + L    +P    +   T
Sbjct: 288 ---------GRKREKLYMNSYGIG-INRLLNVLINNYSDEFGIKLPQLIAPYDVTIIDST 337

Query: 562 SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           ++   +  EI   L    L++  D R+ETI  K+ +     +P I+I G
Sbjct: 338 TNGDGW--EITRGLMKKGLTVLYDDRSETIKNKLLDSKRIGVPHILILG 384


>gi|57641497|ref|YP_183975.1| histidyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
 gi|68744300|sp|Q5JIM2|SYH_PYRKO RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|57159821|dbj|BAD85751.1| histidyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
          Length = 436

 Score = 73.7 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 41/197 (20%), Positives = 70/197 (35%), Gaps = 18/197 (9%)

Query: 448 MKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFN 507
           +  +LD    S   RI+ G+  G   +    FE I  + +G     G  + D NL   F 
Sbjct: 249 LVDLLDAYGVSKWVRIDLGIARGFDYYTSVVFEAIAPNDLGIGSIGGGGRYD-NLIEVFG 307

Query: 508 AFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP-LWLSPIQAIVTTITSS--A 564
                       P        G IER I I+   +KG LP + L P    V  I      
Sbjct: 308 ----------GKPTPATGFAIG-IERLIPIL--EWKGLLPEIKLRPD-VYVIPIGDDREV 353

Query: 565 VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRF 624
            + A EI   L+   +  + +     +   +       +P +++ G K+     + +R  
Sbjct: 354 KKTAIEITQGLREATVRADIELTGRKLRKALDYAGKLGVPYVVLVGKKDLEAGKVTLRDM 413

Query: 625 GSTTTQKVSLLDAIPIL 641
            S   + +    A+  +
Sbjct: 414 KSGEQKSIEKERAVEEI 430


>gi|307706061|ref|ZP_07642880.1| seryl-tRNA synthetase [Streptococcus mitis SK321]
 gi|307618461|gb|EFN97609.1| seryl-tRNA synthetase [Streptococcus mitis SK321]
          Length = 424

 Score = 73.7 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 39/243 (16%), Positives = 91/243 (37%), Gaps = 21/243 (8%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIF 276
           G       E+ ++    E   E + H  L  ++ +          G+  +F+   G ++ 
Sbjct: 115 GADEEDNVEVRRWGTPREFDFEPKAHWDLGEDLGILDWERGGKVTGARFLFYKGLGARLE 174

Query: 277 QTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFA 335
           + + ++M     K+ Y E+ TP +++      +G +  ++ + F +  ++        + 
Sbjct: 175 RAIYNFMLDEHGKEGYTEVITPYMVNHDSMFGTGQYPKFKEDTFELSDSN--------YV 226

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAH 392
           L P         +   +   ++LP+        +R+E   +     GL+R+  F + +  
Sbjct: 227 LIPTAEVPLTNYYRDEILDGKDLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMV 286

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIM 448
            F   E+ + E  K+     +I +       +V LST              +W  A+N  
Sbjct: 287 KFAKPEESYEELEKMTANAENILQKLNLPYRVVALSTGDMGFSAAKTYDLEVWIPAQNTY 346

Query: 449 KGV 451
           + +
Sbjct: 347 REI 349


>gi|295706712|ref|YP_003599787.1| histidyl-tRNA synthetase [Bacillus megaterium DSM 319]
 gi|294804371|gb|ADF41437.1| histidyl-tRNA synthetase [Bacillus megaterium DSM 319]
          Length = 422

 Score = 73.7 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 70/421 (16%), Positives = 139/421 (33%), Gaps = 71/421 (16%)

Query: 276 FQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDS---YRANMFAVKCADDTIKDL 331
           +Q +    R   +  +Y+EI TP + +       G  ++    +  M+  K   D     
Sbjct: 20  WQFVEQRAREICRAFNYQEIRTP-MFEHTELFLRGVGETTDIVQKEMYTFKDRGD----- 73

Query: 332 RTFALKP--MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
           R+  L+P      G   V N    +  + P +L   G ++R E   +     R R F Q 
Sbjct: 74  RSLTLRPEGTAAVGRSFVSNKMFGNPTQ-PTKLFYIGPMFRYERPQA----GRFRQFVQF 128

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFG----------------FEKIMVKLSTRPEK 433
                   +   +   ++  L++S Y+  G                 +     L      
Sbjct: 129 GVEALGVNDPAIDA--EVLALLMSFYQSLGLKKLKLVVNSLGDTESRQAHRQALIDHFAP 186

Query: 434 RVGS-----------------DALWDDAENIMKGV---LDTIKNSSQDRINTGVLLGEGA 473
           R+G                  D   D    +M      LD + + S++            
Sbjct: 187 RIGEFCSDCQSRLEKNPLRILDCKKDRDHELMATAPSILDYLNDYSREYFEKVQQYLTD- 245

Query: 474 FYGPKFEYILKDAI--GRDWQCGTIQVDFNLPSRFNAFYVNSHS--------EKCHPVMI 523
                 +Y++   +  G D+   T     +    F A               E   P   
Sbjct: 246 ---LDIDYVVDPTLVRGLDYYNHTAFELMSEAEGFGAITTLCGGGRYNGLIQEIGGPETP 302

Query: 524 HRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIE 583
                 SIER +  + E     LP+    +   V T+   A E +  I N L+      +
Sbjct: 303 GIGFALSIERLLSAL-EAEGIELPVETG-VDCYVVTMGDEAKEKSVSIVNTLRRAGFVAD 360

Query: 584 TDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            D++++ +  + +     +   +++ G+ E +++ + ++   S   Q+VS+   +  L K
Sbjct: 361 KDYQDKKMKAQFKAADRVQAKFVVVLGEDELAKQVVNVKNMESGEQQEVSIDQLVSYLQK 420

Query: 644 E 644
           +
Sbjct: 421 Q 421


>gi|331703464|ref|YP_004400151.1| glycyl tRNA synthetase [Mycoplasma mycoides subsp. capri LC str.
           95010]
 gi|328802019|emb|CBW54173.1| Glycyl tRNA synthetase [Mycoplasma mycoides subsp. capri LC str.
           95010]
          Length = 456

 Score = 73.7 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 48/346 (13%), Positives = 103/346 (29%), Gaps = 51/346 (14%)

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YREL 358
             +   Q       ++ N   ++       D     L+P    G    F +  +S  ++L
Sbjct: 135 QKKDFTQIRKFALMFKTNQGVLED------DSSIVYLRPETAQGIFINFKNVQRSMRKKL 188

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P  + + G  +RNE +   + + R R F Q +   F       +         +   + F
Sbjct: 189 PFGIGQIGKSFRNEITPG-NFIFRTREFEQMELEFFFDPSDQKDW----FKYWLDQIELF 243

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
             +KI +  S    +    D L   A   +K                G+           
Sbjct: 244 LTKKICLDKSNYKIRENLKDEL---AHYALKTSDIEFNFPFGWGELWGISHRSD------ 294

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI- 537
           F+  +   + ++                +   +   + +     +     G     + I 
Sbjct: 295 FDLKVHQNLSKE----------------DLTVLKEETNQKVLANVIEPSVGVERLMLAIF 338

Query: 538 --------MIENFK---GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF 586
                   + EN       LP  L+P Q  +T ++    + A ++   L  +      D 
Sbjct: 339 WQAYTEEQLEENNSRTVLKLPYNLAPYQVAITPLSKQLNQNANQLFLDLL-NDFDAVYDE 397

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
               I  + R       P +I    +   ++ + IR   +   +++
Sbjct: 398 TGN-IGKRYRRQDAIGTPFVITYDFQTLEDQKVTIRYRDTMKQERI 442


>gi|91069868|gb|ABE10799.1| seryl-tRNA synthetase [uncultured Prochlorococcus marinus clone
           ASNC1363]
          Length = 425

 Score = 73.7 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 41/290 (14%), Positives = 92/290 (31%), Gaps = 32/290 (11%)

Query: 186 PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIY------------GTAWNTQQELTQ 233
           P V +  +    +++        + + ++ +   I             G   +   +L  
Sbjct: 71  PEVNNLKKKGNEYRIKISEFEEKKRNLDKNIHKEICNLPNLPSKDAPIGKDESHNVQLKT 130

Query: 234 YLYFLEESEKRDHRKLAREMDLFH----IAEDGSGVIFWHRKGWKIFQTLISYM-RRKIK 288
           +         + H ++   ++LF          S  +     G ++ + LI++M      
Sbjct: 131 WGDPSVPENLKSHWEIGESLNLFDSVKSTKISKSRFVTLIGNGARLERALINFMLDMHTS 190

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
           + Y E+  P +++      SG    +    F     D          L P       A  
Sbjct: 191 NGYLELMPPALVNSESLTGSGQLPKFSNESFKCSNDD--------LWLSPTAEVPLTAFH 242

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            + +   ++LP++   +   +R E         GL+R+  F + + + FC   +      
Sbjct: 243 RNDIIDPKKLPLKYVAYSPCFRREAGSYGRDTKGLIRLHQFNKVELYWFCEPSKSIEAHK 302

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGV 451
           KI     SI K       ++ + T        R     +W  +    + +
Sbjct: 303 KITLDAESILKKLNLPYRLIDICTGDLGFSSSRTYDLEVWLPSSKCYREI 352


>gi|150026458|ref|YP_001297284.1| glycyl-tRNA synthetase [Flavobacterium psychrophilum JIP02/86]
 gi|149772999|emb|CAL44483.1| Glycine--tRNA ligase [Flavobacterium psychrophilum JIP02/86]
          Length = 513

 Score = 73.7 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 61/343 (17%), Positives = 112/343 (32%), Gaps = 31/343 (9%)

Query: 308 SGHWDSYRA-NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEF 365
           S +W   +  N+        +        L+P    G    F +  KS   ++P  +A+ 
Sbjct: 186 SRNWTEVKQFNLMFGTKIGASADSAMDLYLRPETAQGIFVNFLNVQKSGRMKIPFGIAQT 245

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKI 423
           G  +RNE   +   + R+R F Q +   F     E  + E  K   L   +    G E  
Sbjct: 246 GKAFRNEIV-ARQFIFRMREFEQMEMQFFVKPGEEMKYYEYWKTTRLNWHLSLGLGKENY 304

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
                 +      + A  +         L+ I + +   +          F G K +Y  
Sbjct: 305 RFHDHEKLAHYANAAADIEFNFPFGFKELEGIHSRTDFDLK-----AHEKFSGKKLQY-F 358

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
                 ++    ++    L   F A + NS  E+       R V                
Sbjct: 359 DTETNANYTPYVVETSVGLDRMFLAVFSNSLKEETLEDGSTRTVL--------------- 403

Query: 544 GNLPLWLSPIQAIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
             LP  L+P +A V  +       E A++I   LK    ++  D ++  +  + R     
Sbjct: 404 -QLPSVLAPTKAAVLPLVKKDGLPEVARKIIEKLK-WDFNVAYDEKDA-VGRRYRRQDAL 460

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
             P  I    +   + ++ IR   +    +V + +   I+  E
Sbjct: 461 GTPFCITVDHQTLEDETVTIRHRDTMKQDRVKISELRDIINNE 503


>gi|83814713|ref|YP_446435.1| glycyl-tRNA synthetase [Salinibacter ruber DSM 13855]
 gi|83756107|gb|ABC44220.1| glycyl-tRNA synthetase [Salinibacter ruber DSM 13855]
          Length = 512

 Score = 73.7 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 49/364 (13%), Positives = 116/364 (31%), Gaps = 33/364 (9%)

Query: 289 DDYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDT-IKDLRTFALKPMNCPGHVA 346
           ++  +     ++D+ +   +SG +D      F +    +    D +T  L+P    G   
Sbjct: 168 EEMNDALHAIIMDEEIPAPESGAFDWTDVRQFNLMFETEMGPVDGQTVFLRPETAQGIFV 227

Query: 347 VFNHGLKSYR-ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            F++  +  R  +P  +A+ G  +RNE   +   + R+R F Q +   F       +   
Sbjct: 228 NFHNAREPARLHVPFGVAQIGKAFRNEIV-ARQFVFRMREFEQMEMQYFVKPGTELDWYE 286

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
           +     +  ++  G +   ++     +                      +       I  
Sbjct: 287 QWKERRMKWHESLGIDPSNLRFHEHDQLSHY--------------ANAAVDIQYDFPIGW 332

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGT--IQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
             L G              D    +   G      D     R+  + V + +     + +
Sbjct: 333 KELEGIH-------SRTDYDLSRHEEYSGKKMSYYDPWEEERYTPYVVETSTGLDRTLFM 385

Query: 524 HRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAV--EYAQEIANLLKSHHLS 581
                   E   G             ++P++A +  +T      + A+EI + L  H  +
Sbjct: 386 VLCDAYYEEEVKGD--TRSVLQFHPEVAPVRAGIFPLTDKEGLPDIAREIEDDLNQH-FN 442

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           +  D R  ++  + R       P  I        ++++ +R   +    +V++      +
Sbjct: 443 VRYDDRG-SMGKRYRRQDEAGTPFCITVDFDTLDDQTVTVRDRDTMEQDRVAIDQLATYI 501

Query: 642 TKES 645
             ++
Sbjct: 502 FDQT 505


>gi|229541948|ref|ZP_04431008.1| glycyl-tRNA synthetase [Bacillus coagulans 36D1]
 gi|229326368|gb|EEN92043.1| glycyl-tRNA synthetase [Bacillus coagulans 36D1]
          Length = 512

 Score = 73.7 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 54/352 (15%), Positives = 112/352 (31%), Gaps = 51/352 (14%)

Query: 308 SGHWDSYRANMFAVKCADDTIKDLR-TFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEF 365
           S  W   R      K      +D      L+P    G    F +  ++  ++LP  +A+ 
Sbjct: 192 SKDWTGIRQFNLMFKTYQGVTEDSTNELYLRPETAQGIFVNFKNVQRTMRKKLPFGIAQI 251

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKI 423
           G  +RNE +   + + R R F Q +   FC    E  + +  K +     +      E +
Sbjct: 252 GKSFRNEITPG-NFIFRTREFEQMELEFFCRPGEELKWFDYWKQYAREFLLNLGMKEENL 310

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
            ++   + E    S+A  D                       G+          + +Y L
Sbjct: 311 RLRDHEKEELSHYSNATTDF----------EYNFPFGWGELWGIAS--------RTDYDL 352

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
           K           ++      +  +       +E+  P  I     G+    +  +I+++ 
Sbjct: 353 K---------RHMEYSGEDFTYLD----QETNERFVPYCIE-PSLGADRVALAFLIDSYA 398

Query: 544 ------------GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
                        +L   L+P +A V  ++      A++I + L      ++ D    +I
Sbjct: 399 EEELEDGTSRTVMHLHPALAPYKAAVLPLSKKLSAEARDIFSDLSKT-FMVDFDETG-SI 456

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             + R       P  I        +  + +R   +    +V + +    L +
Sbjct: 457 GKRYRRQDEIGTPFCITYDFDSRDDHMVTVRDRDTMEQTRVPITELKAFLEE 508


>gi|210615765|ref|ZP_03290746.1| hypothetical protein CLONEX_02964 [Clostridium nexile DSM 1787]
 gi|210150101|gb|EEA81110.1| hypothetical protein CLONEX_02964 [Clostridium nexile DSM 1787]
          Length = 885

 Score = 73.7 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 32/143 (22%), Positives = 64/143 (44%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFS 115
            S+ +   E  R+     HS  H++ +A++++        G  +  D   +DF      +
Sbjct: 554 DSVTLEVAEKERANTCKNHSATHLLQKALKTVLGSHVEQKGSLVTPDRLRFDFAHFSAMT 613

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            +EL ++E  +   IA++ P + + ++ E+A+          K E        E+V +  
Sbjct: 614 PEELEKVENIVNTEIAKNVPVVTEVMNIEQAKATGAMALFGEKYE--------EDVRVVS 665

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G++  +LC G HV +TG +  F
Sbjct: 666 MGDFSKELCGGTHVSNTGNITTF 688


>gi|256384091|gb|ACU78661.1| glycine--tRNA ligase [Mycoplasma mycoides subsp. capri str. GM12]
 gi|256384923|gb|ACU79492.1| glycine--tRNA ligase [Mycoplasma mycoides subsp. capri str. GM12]
 gi|296455486|gb|ADH21721.1| glycine--tRNA ligase [synthetic Mycoplasma mycoides JCVI-syn1.0]
          Length = 456

 Score = 73.7 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 48/346 (13%), Positives = 102/346 (29%), Gaps = 51/346 (14%)

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YREL 358
             +   Q       ++ N   ++       D     L+P    G    F +  +S  ++L
Sbjct: 135 QKKDFTQIRKFALMFKTNQGVLED------DSSIVYLRPETAQGIFINFKNVQRSMRKKL 188

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P  + + G  +RNE +   + + R R F Q +   F                 +   + F
Sbjct: 189 PFGIGQIGKSFRNEITPG-NFIFRTREFEQMELEFFFDPNDQ----RDWFKYWLDQIELF 243

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK 478
             +KI +  S    +    D L   A   +K                G+           
Sbjct: 244 LTKKICLDKSNYKIRENLKDEL---AHYALKTSDIEFNFPFGWGELWGISHRSD------ 294

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI- 537
           F+  +   + ++                +   +   + +     +     G     + I 
Sbjct: 295 FDLKVHQNLSKE----------------DLTVLKEETNQKVLANVIEPSVGVERLMLAIF 338

Query: 538 --------MIENFK---GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF 586
                   + EN       LP  L+P Q  +T ++    + A ++   L  +      D 
Sbjct: 339 WQAYTEEQLEENNSRTVLKLPYNLAPYQVAITPLSKQLNQNANQLFLDLL-NDFDAVYDE 397

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
               I  + R       P +I    +   ++ + IR   +   +++
Sbjct: 398 TGN-IGKRYRRQDAIGTPFVITYDFQTLEDQKVTIRYRDTMKQERI 442


>gi|15807053|ref|NP_295782.1| glycyl-tRNA synthetase [Deinococcus radiodurans R1]
 gi|6459849|gb|AAF11606.1|AE002042_1 glycyl-tRNA synthetase [Deinococcus radiodurans R1]
          Length = 521

 Score = 73.7 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 50/358 (13%), Positives = 104/358 (29%), Gaps = 43/358 (12%)

Query: 307 QSGHWDSYRANMFAVKCADDTIKDLRTFAL-KPMNCPGHVAVFNHGLKS-YRELPVRLAE 364
           + G W   +      +     + D  ++   +P    G    F + + S  R LP  +A+
Sbjct: 171 EVGEWTDPKPFNMMFRTTIGPVADEESYGYLRPETAQGIFTNFKNVVDSTSRRLPFGIAQ 230

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
            G  +RNE +   + + RVR   Q +   F T               +  ++D G  +  
Sbjct: 231 IGKAFRNEITPR-NFIFRVRELEQMEIEFFVTPGTDEEWHEHWLEKRLKWWEDQGVPRE- 288

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
                          + D  +  +        +   D    G    EG      ++    
Sbjct: 289 ------------KIEILDVPKEDLAHYSKRTYDLMYDYPTLGHEEIEGIANRSDYDLGSH 336

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
                +        + N             ++   P +I     G     + ++ E F  
Sbjct: 337 TKSQSELGLVAKVEENNDSIAKLTIPHPETNKPVVPFVIE-PSAGVDRAMLAVLSEAFTK 395

Query: 545 ------------NLPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHH-LSIETDFRN 588
                        L   L+PI+  V  +        + A+ I   L+      +  +   
Sbjct: 396 ETLENGNERIVLKLKPHLAPIKVAVIPLARNREEITDVAKAIKAELQGLGLGRVLYEDSG 455

Query: 589 ETINYKIREHSIKKIPIIIIC-------GDK--EASERSIGIRRFGSTTTQKVSLLDA 637
             I    R H     P  +         G+   E+ + ++ +R   +   ++V + + 
Sbjct: 456 N-IGKAYRRHDEVGTPYCVTVDFDTVGLGENTDESLKDTVTVRDRDTLAQERVKISEL 512


>gi|312277730|gb|ADQ62387.1| Seryl-tRNA synthetase [Streptococcus thermophilus ND03]
          Length = 425

 Score = 73.7 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 76/199 (38%), Gaps = 16/199 (8%)

Query: 261 DGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMF 319
            GS  +F+   G ++ + + ++M     K+ Y E+ TP +++      +G +  ++ + F
Sbjct: 159 TGSRFLFYKGLGARLERAIYNFMLDEHAKEGYTEMITPYMVNHDSMFGTGQYPKFKEDTF 218

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS--- 376
            +        D   + L P         +   +   +ELP+        +R+E   +   
Sbjct: 219 EL--------DGTDYVLIPTAEVPLTNYYRGEILDGKELPIYFTALSPSFRSEAGSAGRD 270

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR-- 434
             GL+R+  F + +   F   E  ++E  K+     +I +       ++ L T       
Sbjct: 271 TRGLIRLHQFHKVEMVKFSKPEDSYDELEKMVVNAENILQKLNLPYRVITLCTGDMGFSA 330

Query: 435 --VGSDALWDDAENIMKGV 451
                  +W  A+N  + +
Sbjct: 331 AKTYDLEVWIPAQNTYREI 349


>gi|294508373|ref|YP_003572431.1| glycyl-tRNA synthetase [Salinibacter ruber M8]
 gi|294344701|emb|CBH25479.1| glycyl-tRNA synthetase [Salinibacter ruber M8]
          Length = 512

 Score = 73.7 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 48/364 (13%), Positives = 115/364 (31%), Gaps = 33/364 (9%)

Query: 289 DDYEEINTPQVLDQHLWQ-QSGHWDSYRANMFAVKCADDT-IKDLRTFALKPMNCPGHVA 346
           ++  +     ++D+ +   +SG +D      F +    +    D +   L+P    G   
Sbjct: 168 EEMNDALHAIIMDEEIPAPESGAFDWTDVRQFNLMFETEMGPVDGQKVFLRPETAQGIFV 227

Query: 347 VFNHGLKSYR-ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            F++  +  R  +P  +A+ G  +RNE   +   + R+R F Q +   F       +   
Sbjct: 228 NFHNAREPARLHVPFGVAQIGKAFRNEIV-ARQFVFRMREFEQMEMQYFVKPGTELDWYE 286

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
           +     +  ++  G +   ++     +                      +       I  
Sbjct: 287 QWKERRMKWHESLGIDPSNLRFHEHDQLSHY--------------ANAAVDIQYDFPIGW 332

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGT--IQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
             L G              D    +   G      D     R+  + V + +     + +
Sbjct: 333 KELEGIH-------SRTDYDLSRHEEYSGKKMSYYDPWEEERYTPYVVETSTGLDRTLFM 385

Query: 524 HRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAV--EYAQEIANLLKSHHLS 581
                   E   G             ++P++A +  +T      + A+EI + L  H  +
Sbjct: 386 VLCDAYYEEEVKGD--TRSVLQFHPEVAPVRAGIFPLTDKEGLPDIAREIEDDLNQH-FN 442

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           +  D R  ++  + R       P  I        ++++ +R   +    +V++      +
Sbjct: 443 VRYDDRG-SMGKRYRRQDEAGTPFCITVDFDTLDDQTVTVRDRDTMEQDRVAIDQLATYI 501

Query: 642 TKES 645
             ++
Sbjct: 502 FDQT 505


>gi|116627246|ref|YP_819865.1| seryl-tRNA synthetase [Streptococcus thermophilus LMD-9]
 gi|122268151|sp|Q03MA3|SYS_STRTD RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|116100523|gb|ABJ65669.1| seryl-tRNA synthetase [Streptococcus thermophilus LMD-9]
          Length = 425

 Score = 73.7 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 76/199 (38%), Gaps = 16/199 (8%)

Query: 261 DGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMF 319
            GS  +F+   G ++ + + ++M     K+ Y E+ TP +++      +G +  ++ + F
Sbjct: 159 TGSRFLFYKGLGARLERAIYNFMLDEHAKEGYTEMITPYMVNHDSMFGTGQYPKFKEDTF 218

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS--- 376
            +        D   + L P         +   +   +ELP+        +R+E   +   
Sbjct: 219 EL--------DGTDYVLIPTAEVPLTNYYRGEILDGKELPIYFTALSPSFRSEAGSAGRD 270

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR-- 434
             GL+R+  F + +   F   E  ++E  K+     +I +       ++ L T       
Sbjct: 271 TRGLIRLHQFHKVEMVKFSKPEDSYDELEKMVVNAENILQKLNLPYRVITLCTGDMGFSA 330

Query: 435 --VGSDALWDDAENIMKGV 451
                  +W  A+N  + +
Sbjct: 331 AKTYDLEVWIPAQNTYREI 349


>gi|261417441|ref|YP_003251124.1| glycyl-tRNA synthetase [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261373897|gb|ACX76642.1| glycyl-tRNA synthetase [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|302328095|gb|ADL27296.1| glycine--tRNA ligase [Fibrobacter succinogenes subsp. succinogenes
           S85]
          Length = 470

 Score = 73.7 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 57/397 (14%), Positives = 126/397 (31%), Gaps = 65/397 (16%)

Query: 277 QTLISYMRRKIKDD--YEEINTPQVLDQHLWQQSGHWDSYRA---NMFAVKCADDTIKDL 331
           Q L   +         ++E++   V ++      G  D  +    N+           + 
Sbjct: 105 QLLEEKLGEGCCAGKNFDEVHQMMVDNKIECPTCGKTDWTKPRAFNLMFQTEIGVIEGEG 164

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYR-ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
               L+P    G    F + + + R  +P  + + G  +RNE +   + + R R F Q +
Sbjct: 165 NKVYLRPETAQGIFVDFRNIVDNVRPRIPFGVGQIGKSFRNEITPG-NFIFRTREFEQME 223

Query: 391 AHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIM 448
              FC    E  +    + +     +  D G ++  ++L                     
Sbjct: 224 LEFFCEPGTELDWYNFWRKYCFEW-LVNDLGVKREKLRLREHA----------------- 265

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
           K  L    N + D +      G G  +G                   +    N       
Sbjct: 266 KEELSHYSNGTTD-VEYEFPFGWGELWGIA-----------SRTNYDLTQHQNESKVKQE 313

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMI------------ENFKGNLPLWLSPIQAI 556
           +     +++  P ++  ++   +ER + +++            E    +    ++P++  
Sbjct: 314 YIDPVQNKRYIPYVVEPSL--GVERLLLVLLCNAYEVEKLENDERTVLHFDPKVAPVKVA 371

Query: 557 VTTITSS--AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIIC----- 609
           V  +       E A+E+   L +   ++E D   ++I  + R       P  +       
Sbjct: 372 VLPLVKKGKVKEKAEELYQKLLNR-WNVEYDET-QSIGKRYRRQDELGTPFCVTVDFDTV 429

Query: 610 GDKE---ASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           G+ E   A    + +R   S   + V++      L +
Sbjct: 430 GEGESDPAKLGYVTVRERDSMKQELVAIDKLEAYLFE 466


>gi|302037512|ref|YP_003797834.1| seryl-tRNA synthetase [Candidatus Nitrospira defluvii]
 gi|300605576|emb|CBK41909.1| Seryl-tRNA synthetase [Candidatus Nitrospira defluvii]
          Length = 428

 Score = 73.7 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 44/324 (13%), Positives = 101/324 (31%), Gaps = 45/324 (13%)

Query: 137 LKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKK 196
            ++    ++A    ++  E  K+        +E + +  +       R P++  T     
Sbjct: 62  KREKQPADEAMAAMKALGETIKIH-------EEQLRVVEEQLAHIALRIPNLPHTSVPDG 114

Query: 197 FFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLF 256
             +   +    W             GT          +    E     D  +  R     
Sbjct: 115 RDEADNIEVRRW-------------GTPPQLSAPAQSHWDLGEALGILDFDRAVRMAKAR 161

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSY 314
                GS        G ++ + LI+YM      +  Y E+  P ++++     +G    +
Sbjct: 162 FAVLTGS--------GARLERALINYMLDMHTTRHGYREVLPPLLVNRTAMTGTGQLPKF 213

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP- 373
             ++F ++             L P        +    + +   LP+R   +   +R E  
Sbjct: 214 EDDLFQLRD--------EELFLIPTAEVPVTNLHREEIMAEESLPIRYTAYTPCFRREAG 265

Query: 374 --SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP 431
                  GL+R+  F + +   F   EQ ++E  ++ +   +I +  G    ++ L    
Sbjct: 266 SYGKDTRGLIRLHQFNKVELVAFARPEQSYDELERLTSHAEAILQGLGLHYRVITLCKGD 325

Query: 432 EKR----VGSDALWDDAENIMKGV 451
                       +W  ++   + +
Sbjct: 326 MGFSAAKTYDIEVWLPSQQTFREI 349


>gi|307710546|ref|ZP_07646982.1| seryl-tRNA synthetase [Streptococcus mitis SK564]
 gi|307618699|gb|EFN97839.1| seryl-tRNA synthetase [Streptococcus mitis SK564]
          Length = 424

 Score = 73.7 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 54/363 (14%), Positives = 124/363 (34%), Gaps = 41/363 (11%)

Query: 106 YDFDKEQPFSSDELAQIEKKMQEIIARDSPF---------LKQYLSHEKARELFESKKEA 156
           +D   E+  +    A +  +M+EI A+              +  +S E A+     +   
Sbjct: 11  FDAVAEKLATRGVDAAVLNEMKEIDAKRRDILVKVETLKAERNTVSAEIAQAKRNKENAD 70

Query: 157 YKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPM 216
            K+  ++++ A+    +                 T  +          GA    D +  +
Sbjct: 71  DKIAAMQTLSAE----VKSLDAELAEIDAKLTEFTTTLPNIPADSVPVGA----DEDDNV 122

Query: 217 LSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIF 276
             R +GT      E   +    E+    D  +  +      +        F+   G ++ 
Sbjct: 123 EVRRWGTPREFDFEPKAHWDLGEDLGILDWERGGKVTGARFL--------FYKGLGARLE 174

Query: 277 QTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFA 335
           + + ++M     K+ Y E+ TP +++      +G +  ++ + F +  ++        + 
Sbjct: 175 RAIYNFMLDEHGKEGYTEVITPYMVNHDSMFGTGQYPKFKEDTFELSDSN--------YV 226

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAH 392
           L P         +   +   ++LP+        +R+E   +     GL+R+  F + +  
Sbjct: 227 LIPTAEVPLTNYYRDEILDGKDLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMV 286

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIM 448
            F   E+ + E  K+     +I +       +V LST              +W  A+N  
Sbjct: 287 KFAKPEESYEELEKMTANAENILQKLNLPYRVVALSTGDMGFSAAKTYDLEVWIPAQNTY 346

Query: 449 KGV 451
           + +
Sbjct: 347 REI 349


>gi|224282568|ref|ZP_03645890.1| glycyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171]
          Length = 422

 Score = 73.7 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 56/379 (14%), Positives = 111/379 (29%), Gaps = 48/379 (12%)

Query: 278 TLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALK 337
            L      K  D   E     ++      +    +    +M           +     L+
Sbjct: 18  KLEESYAEKHGDKLPENGLKDIVCPECGTRGEWTEPRDFSMMLRTHLGPVEDENSLHYLR 77

Query: 338 PMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT 396
           P    G    F +    S  + P  +A  G  +RNE +   + + R R F Q +   F  
Sbjct: 78  PETAQGIFVDFKNVMTSSRSKPPFGIANMGKSFRNEITPG-NFIFRTREFEQMEMEFFVV 136

Query: 397 KEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIK 456
                       +     Y D G     ++    P+         +   +  K  +D   
Sbjct: 137 PGTDEEWHQYWIDTRTRWYTDLGINPENLRHYEHPK---------EKLSHYSKRTVDIEY 187

Query: 457 NSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE 516
                  + G L G            + +    D    +     +L      ++  +  E
Sbjct: 188 KFGFQGSDWGELEG------------IANRTDYDLSAHSKHSGEDLS-----YFNQATGE 230

Query: 517 KCHPVMIHRAVFGSIERFIGIMIENFK----------------GNLPLWLSPIQAIVTTI 560
           K  P +I     G     +  +++ +                   L   L+P++A V  +
Sbjct: 231 KFVPYVIE-PAAGLTRSLMAFLVDAYDVDEAPNTKGGVDKRTVLRLDPRLAPVKAAVLPL 289

Query: 561 TSSAV--EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERS 618
           +        A ++A  L+ H   I+ D     I  + R       P+ I        +++
Sbjct: 290 SKKPELQSIAHDLAADLRQHEWMIDYDEAGA-IGRRYRREDEIGTPLCITVDFDTIDDQA 348

Query: 619 IGIRRFGSTTTQKVSLLDA 637
           + IR   +   ++V+L   
Sbjct: 349 VTIRERDTMQQERVALDKV 367


>gi|11387153|sp|Q9RSR5|SYG_DEIRA RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
          Length = 506

 Score = 73.7 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 50/358 (13%), Positives = 104/358 (29%), Gaps = 43/358 (12%)

Query: 307 QSGHWDSYRANMFAVKCADDTIKDLRTFAL-KPMNCPGHVAVFNHGLKS-YRELPVRLAE 364
           + G W   +      +     + D  ++   +P    G    F + + S  R LP  +A+
Sbjct: 156 EVGEWTDPKPFNMMFRTTIGPVADEESYGYLRPETAQGIFTNFKNVVDSTSRRLPFGIAQ 215

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
            G  +RNE +   + + RVR   Q +   F T               +  ++D G  +  
Sbjct: 216 IGKAFRNEITPR-NFIFRVRELEQMEIEFFVTPGTDEEWHEHWLEKRLKWWEDQGVPRE- 273

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
                          + D  +  +        +   D    G    EG      ++    
Sbjct: 274 ------------KIEILDVPKEDLAHYSKRTYDLMYDYPTLGHEEIEGIANRSDYDLGSH 321

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
                +        + N             ++   P +I     G     + ++ E F  
Sbjct: 322 TKSQSELGLVAKVEENNDSIAKLTIPHPETNKPVVPFVIE-PSAGVDRAMLAVLSEAFTK 380

Query: 545 ------------NLPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHH-LSIETDFRN 588
                        L   L+PI+  V  +        + A+ I   L+      +  +   
Sbjct: 381 ETLENGNERIVLKLKPHLAPIKVAVIPLARNREEITDVAKAIKAELQGLGLGRVLYEDSG 440

Query: 589 ETINYKIREHSIKKIPIIIIC-------GDK--EASERSIGIRRFGSTTTQKVSLLDA 637
             I    R H     P  +         G+   E+ + ++ +R   +   ++V + + 
Sbjct: 441 N-IGKAYRRHDEVGTPYCVTVDFDTVGLGENTDESLKDTVTVRDRDTLAQERVKISEL 497


>gi|86608180|ref|YP_476942.1| histidyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86556722|gb|ABD01679.1| histidyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 432

 Score = 73.7 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 66/428 (15%), Positives = 148/428 (34%), Gaps = 79/428 (18%)

Query: 269 HRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQS--GHWDSYRANMFAVKCAD 325
             +  +++Q + +  R  + + +Y+EI TP +    L+ +S     D     M++     
Sbjct: 14  LPQEVRLWQQVEASAREILGRANYQEIRTPILELTELFARSIGSATDVVGKEMYSF---- 69

Query: 326 DTIKDLRTFALKPMNCPGHVAVF-NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVR 384
            + +  +  +L+P N  G V  +  HGL++  ++  RL   G ++R E   +     R R
Sbjct: 70  -STRGEQEVSLRPENTAGVVRAYIQHGLQTAGDV-QRLWYCGPMFRYERPQA----GRQR 123

Query: 385 GFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
            F Q    +  +++   +   ++  L   + +  G E + ++        +G        
Sbjct: 124 QFHQLGVELLGSRDPRADA--EVIALAWELLQAVGAENLSLR-----LNSLGDLQD---- 172

Query: 445 ENIMKGVLDTIKNSSQDRINTGVLLG-----------------EGAFYGPKFEYILKDAI 487
               +  L       +++++                       E A   PK    L D +
Sbjct: 173 RRAYRQALVDYLTPLREKLDPDSQERLTRNPLRILDSKDPRTREIAEGAPK----LPDYL 228

Query: 488 GRDWQC--GTIQVDFNL---PSRFN-------AFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           G + +     +Q    +   P + +        +Y ++  E   P +  ++      R+ 
Sbjct: 229 GPESRAFFEQVQAHLQMLDIPYQLDPYLVRGLDYYTDTAFEIVSPDLGSQSTVCGGGRYD 288

Query: 536 GIMIENFKGNLPL--W-------------------LSPIQAIVTTITSSAVEYAQEIANL 574
           G++ E    + P   W                    +P++  V +  + A   +  IA  
Sbjct: 289 GLVEELGGPSTPAVGWAVGMERLVLLLQKKQGEAPPAPVEVYVISRGAKAEAQSLRIAQA 348

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           L+      E D        + +  S       ++ GD EA+   + ++   +   Q +  
Sbjct: 349 LRRAGFCTELDLSGSAFGKQFKRASRSGATWAVVLGDAEAAAGEVQLKHLPTGQQQTLLQ 408

Query: 635 LDAIPILT 642
            D +  L 
Sbjct: 409 ADLVKYLA 416


>gi|254382919|ref|ZP_04998275.1| glycyl-tRNA synthetase [Streptomyces sp. Mg1]
 gi|194341820|gb|EDX22786.1| glycyl-tRNA synthetase [Streptomyces sp. Mg1]
          Length = 460

 Score = 73.7 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 51/321 (15%), Positives = 99/321 (30%), Gaps = 23/321 (7%)

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
                T        L+P    G    F      S ++ P  +A+ G  +RNE +   + +
Sbjct: 145 THLGPTQDTGSKAYLRPETAQGIFTNFAQVQTTSRKKPPFGIAQMGKSFRNEITPG-NFI 203

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            R R F Q +   F    +             + Y+  G  +  ++    P+        
Sbjct: 204 FRTREFEQMEMEFFVKPGEDEQWQEYWMAERWNWYRGLGIREENIRWYEHPK-------- 255

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDF 500
            +   +  K   D     +        L G       + ++ LK       Q  T   D 
Sbjct: 256 -EKLSHYSKRTADIEYRFNFGGNEFSELEGVAN----RTDFDLKAHSAASGQDLT-YFDQ 309

Query: 501 NLPSRFNAFYVNSH---SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIV 557
               R+  + +      +      M+            G+M +     L   L+PI+  V
Sbjct: 310 EAGERYTPYVIEPAAGVNRAMLAFMLDAYNEDEAPNAKGVMEKRTVMRLDPRLAPIKVAV 369

Query: 558 TTIT--SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEAS 615
             ++        A+ +A  L+ +  +IE D     I  + R       P  +        
Sbjct: 370 LPLSRNPQLSPKAKGLAADLRKN-WNIEFDDAGA-IGRRYRRQDEIGTPFCVTVDFDTLD 427

Query: 616 ERSIGIRRFGSTTTQKVSLLD 636
           + ++ +R   +   ++VSL  
Sbjct: 428 DNAVTVRERDTMKQERVSLDQ 448


>gi|322377063|ref|ZP_08051555.1| serine--tRNA ligase [Streptococcus sp. M334]
 gi|321281776|gb|EFX58784.1| serine--tRNA ligase [Streptococcus sp. M334]
          Length = 424

 Score = 73.7 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 75/193 (38%), Gaps = 16/193 (8%)

Query: 267 FWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD 325
           F+   G ++ + L ++M     K+ Y E+ TP +++      +G +  ++ + F +  ++
Sbjct: 165 FYKGLGARLERALYNFMLDEHGKEGYTEVITPYMVNHDSMFGTGQYPKFKEDTFELSDSN 224

Query: 326 DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMR 382
                   + L P         +   +   ++LP+        +R+E   +     GL+R
Sbjct: 225 --------YVLIPTAEVPLTNYYRDEILDGKDLPIYFTAMSPSFRSEAGSAGRDTRGLIR 276

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSD 438
           +  F + +   F   E+ + E  K+     +I +       +V LST             
Sbjct: 277 LHQFHKVEMVKFAKPEESYEELEKMTANAENILQKLNLPYRVVALSTGDMGFSAAKTYDL 336

Query: 439 ALWDDAENIMKGV 451
            +W  A+N  + +
Sbjct: 337 EVWIPAQNTYREI 349


>gi|161611297|ref|YP_138864.2| seryl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
 gi|161936380|ref|YP_140747.2| seryl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
          Length = 425

 Score = 73.7 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 76/199 (38%), Gaps = 16/199 (8%)

Query: 261 DGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMF 319
            GS  +F+   G ++ + + ++M     K+ Y E+ TP +++      +G +  ++ + F
Sbjct: 159 TGSRFLFYKGLGARLERAIYNFMLDEHAKEGYTEMITPYMVNHDSMFGTGQYPKFKEDTF 218

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS--- 376
            +        D   + L P         +   +   +ELP+        +R+E   +   
Sbjct: 219 EL--------DGTDYVLIPTAEVPLTNYYRGEILDGKELPIYFTALSPSFRSEAGSAGRD 270

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR-- 434
             GL+R+  F + +   F   E  ++E  K+     +I +       ++ L T       
Sbjct: 271 TRGLIRLHQFHKVEMVKFSKPEDSYDELEKMVVNAENILQKLNLPYRVITLCTGDMGFSA 330

Query: 435 --VGSDALWDDAENIMKGV 451
                  +W  A+N  + +
Sbjct: 331 AKTYDLEVWIPAQNTYREI 349


>gi|306830557|ref|ZP_07463724.1| serine--tRNA ligase [Streptococcus gallolyticus subsp. gallolyticus
           TX20005]
 gi|304427275|gb|EFM30380.1| serine--tRNA ligase [Streptococcus gallolyticus subsp. gallolyticus
           TX20005]
          Length = 425

 Score = 73.7 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 77/199 (38%), Gaps = 16/199 (8%)

Query: 261 DGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMF 319
            GS  +F+   G ++ + + ++M     K+ Y E+  P +++      +G +  ++ + F
Sbjct: 159 TGSRFLFYKGLGARLERAIYNFMLDEHAKEGYTEVIPPYMVNHDSMFGTGQYPKFKEDTF 218

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS--- 376
            +  +D        + L P         +   +   +ELPV        +R+E   +   
Sbjct: 219 ELADSD--------YVLIPTAEVPLTNYYRGEILDGKELPVYFTAMSPSFRSEAGSAGRD 270

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR-- 434
             GL+R+  F + +   F   E  ++E  K+     +I +  G    ++ L T       
Sbjct: 271 TRGLIRLHQFHKVEMVKFSKPETSYDELEKMVANAENILQKLGLPYRVITLCTGDMGFSA 330

Query: 435 --VGSDALWDDAENIMKGV 451
                  +W  A+N  + +
Sbjct: 331 AKTYDLEVWIPAQNTYREI 349


>gi|302389916|ref|YP_003825737.1| histidyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
 gi|302200544|gb|ADL08114.1| histidyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
          Length = 423

 Score = 73.7 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 70/408 (17%), Positives = 128/408 (31%), Gaps = 56/408 (13%)

Query: 279 LISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALK 337
           L +  R       Y EI TP      L+Q+     +          +D   K  R+  LK
Sbjct: 23  LENIFREICGQFGYREIRTPTFEHTELFQRGIGETTDIVEKEMYTFSD---KSGRSITLK 79

Query: 338 PM-NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT 396
           P    P   A   H L + + +PV+L      +R E   +     R R F Q     F +
Sbjct: 80  PEGTAPVARAYIEHKLYN-KPMPVKLFYITPCFRYERPQA----GRQREFHQFGIEAFGS 134

Query: 397 KEQMFNECLKIHNLIISIYKDFGFEKIM-------VKLSTRPEKRVGSDALWDDA----- 444
              + +   ++  L +   K  G + +         +      K+   D L++ A     
Sbjct: 135 PSPLIDV--EVITLAVFFLKRLGLDSLEVRINSIGCERCREDYKKALEDFLFEKANSLCD 192

Query: 445 -------ENIMKGVLDTIKNSSQDRI-------NTGVLLGEGAFYGPKFEYILKDAIGRD 490
                   N ++ +LD      Q  +               G F   K      D     
Sbjct: 193 TCKVRLGRNTLR-ILDCKDPGCQKLLVEAPVILEYLCDNCRGHFDEVKKGLSALDVKYSV 251

Query: 491 WQCGTIQVDFNLPSRFNAFYVNSH-------SEKCHPVMIHRAVFGSIERFIGI----MI 539
                  +D+   + F     +           +   ++       +     GI    +I
Sbjct: 252 DPGIVRGLDYYTKTVFEIISKDLGAQSTVCGGGRYDHLVEECGGPPTPAAGFGIGIERLI 311

Query: 540 ENFKGNLPLWLSPIQ--AIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
              + N  L + PIQ    +  +  +  +Y  ++   L+    S ETD+   ++  +++ 
Sbjct: 312 MVLEANGLLDIPPIQMDVFIAVLDETYRDYGLKLLYRLRMAGFSAETDYVGRSLKAQMKY 371

Query: 598 HSIKKIP--IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
               KIP     I G+ E     I ++   +   +KV   +    L  
Sbjct: 372 A--DKIPSKYAFIIGEDEVKTGIITVKDLTTGEQEKVPCEEVETYLKN 417


>gi|312112686|ref|YP_003991002.1| glycyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
 gi|311217787|gb|ADP76391.1| glycyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
          Length = 460

 Score = 73.7 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 56/343 (16%), Positives = 103/343 (30%), Gaps = 50/343 (14%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    F +  ++  ++LP  +A+ G  +RNE +
Sbjct: 149 FNLMFKTYQGVTESSANEIYLRPETAQGIFVNFKNVQRTMRKKLPFGIAQIGKSFRNEIT 208

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
              +   R R F Q +   FC    E  + +  K       +      E I ++  T+ E
Sbjct: 209 PG-NFTFRTREFEQMELEFFCKPGEELKWFDYWKQFCKQWLLSLGMKEENIRLRDHTKEE 267

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
               S+A  D             K         G+          + +Y LK        
Sbjct: 268 LSHYSNATTDI----------EYKFPFGWGELWGIAS--------RTDYDLK-------- 301

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK--------- 543
                           +     +E+  P  I     G+    +  MI+ +          
Sbjct: 302 -----QHMEYSGEDFRYIDQETNERYIPYCIE-PSLGADRVTLAFMIDAYDEEELEDGTT 355

Query: 544 ---GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
                L   L+P +A V  ++    E A+ I   L  H   ++ D    +I  + R    
Sbjct: 356 RTVMRLHPALAPYKAAVFPLSKKLAEGARNIFADLSKH-FMVDYDETG-SIGKRYRRQDE 413

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              P  I        +  + +R   +    ++ +      L +
Sbjct: 414 IGTPFCITYDFDSEQDGMVTVRDRDTMEQVRIPISQLKSFLEE 456


>gi|224159055|ref|XP_002197555.1| PREDICTED: similar to glutamyl-prolyl-tRNA synthetase, partial
           [Taeniopygia guttata]
          Length = 166

 Score = 73.7 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 35/159 (22%), Positives = 64/159 (40%), Gaps = 6/159 (3%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ-QSGHWDSYRAN 317
            D SG          I++ +  +   +IK    E    P  + Q   + +  H   +   
Sbjct: 11  YDVSGCYILRPWAHAIWEAIKDFFDAEIKKLGVENCYFPMFVSQAALETEKSHIADFAPE 70

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           +  V  +  T       A++P +       +   ++S+R+LP++L ++ SV R E     
Sbjct: 71  VAWVTRSGKTEL-AEPIAIRPTSETVMYPSYAKWVQSHRDLPIKLNQWCSVVRWEFK-HP 128

Query: 378 HGLMRVRGFTQDDAHV-FCTKEQMFNECLKIHNLIISIY 415
              +R R F   + H  F T E+   E  K + LI+ +Y
Sbjct: 129 QPFLRTREFLWQEGHTAFATYEEAAEEV-KANALILDLY 166


>gi|312862541|ref|ZP_07722783.1| serine--tRNA ligase [Streptococcus vestibularis F0396]
 gi|311101946|gb|EFQ60147.1| serine--tRNA ligase [Streptococcus vestibularis F0396]
          Length = 425

 Score = 73.7 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/222 (17%), Positives = 83/222 (37%), Gaps = 20/222 (9%)

Query: 242 EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINT 296
           E + H  L  ++ +          GS  +F+   G K+ + + ++M     K+ Y E+ T
Sbjct: 136 EIKPHWDLGEDLGILDWERGAKVTGSRFLFYKGLGAKLERAIYNFMLDEHAKEGYTEMIT 195

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +++      +G +  ++ + F +        D   + L P         +   +   +
Sbjct: 196 PYMVNHDSMFGTGQYPKFKEDTFEL--------DGTDYVLIPTAEVPLTNYYRGEILDGK 247

Query: 357 ELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           ELP+        +R+E   +     GL+R+  F + +   F   E  ++E  K+     +
Sbjct: 248 ELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFSKPESSYDELEKMVVNAEN 307

Query: 414 IYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
           I +       ++ L T              +W  A+N  + +
Sbjct: 308 ILQKLNLPYRVITLCTGDMGFSAAKTYDLEVWIPAQNTYREI 349


>gi|110598295|ref|ZP_01386570.1| glycyl-tRNA synthetase [Chlorobium ferrooxidans DSM 13031]
 gi|110340103|gb|EAT58603.1| glycyl-tRNA synthetase [Chlorobium ferrooxidans DSM 13031]
          Length = 489

 Score = 73.7 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 55/398 (13%), Positives = 122/398 (30%), Gaps = 63/398 (15%)

Query: 274 KIFQTLISYMRRKIKDDYEEINTPQVLDQHLWQQ------------SGHWDSYRANMFAV 321
           K+ +       +K++  YE + + +  ++ L++             SG W   R      
Sbjct: 124 KLRRDGKDEELQKVQSAYENVASAEDSNRALYELIIAEKIKAPDTGSGDWTEVRQFNLMF 183

Query: 322 KCADDTIKDLRTFAL-KPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHG 379
           +C    + D  +    +P    G    F++    S   +P  +A+ G  +RNE     + 
Sbjct: 184 QCNMGAVADKSSIVYLRPETAQGIFVNFHNVRESSRMRVPFGIAQIGKAFRNEIVKG-NF 242

Query: 380 LMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD-FGFEKIMVKLSTRPEKRVGSD 438
           + R+  F Q +   F                  + Y    G     +      +    +D
Sbjct: 243 IFRMVEFEQMEMQYFVKPGTQKGAFEAWREERFAWYSTALGLRAEKLHWYKHDKLAHYAD 302

Query: 439 ALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
             +D                 +     G+   EG     + ++ LK              
Sbjct: 303 LAYDI----------------KYEFPFGIEEIEGIH--SRTDFDLK-------------Q 331

Query: 499 DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI-----------ENFKGNLP 547
                 +   +     +E+  P ++  +  G    F+ ++            E     L 
Sbjct: 332 HQEYSGKNMEYIDQLTNERFIPYVVETSA-GCDRLFLALLADAYREDVVDGEERVMLKLA 390

Query: 548 LWLSPIQAIVTTITSS--AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPI 605
             ++P++A V  +       E A ++ + L      ++ D    +I  + R       P 
Sbjct: 391 PKVAPVKAAVLPLMKKGGMGEKAAQLRDELSES-FLVQYDDAG-SIGKRYRRQDEIGTPF 448

Query: 606 IIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            I    +   E ++ +R   S   +++ L      + +
Sbjct: 449 CITVDHQSLEEGTVTVRFRDSAAQERIDLSRVREFICE 486


>gi|325977535|ref|YP_004287251.1| seryl-tRNA synthetase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|325177463|emb|CBZ47507.1| serS [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069]
          Length = 425

 Score = 73.7 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 77/199 (38%), Gaps = 16/199 (8%)

Query: 261 DGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMF 319
            GS  +F+   G ++ + + ++M     K+ Y E+  P +++      +G +  ++ + F
Sbjct: 159 TGSRFLFYKGLGARLERAIYNFMLDEHAKEGYTEVIPPYMVNHDSMFGTGQYPKFKEDTF 218

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS--- 376
            +  +D        + L P         +   +   +ELPV        +R+E   +   
Sbjct: 219 ELADSD--------YVLIPTAEVPLTNYYRGEILDGKELPVYFTAMSPSFRSEAGSAGRD 270

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR-- 434
             GL+R+  F + +   F   E  ++E  K+     +I +  G    ++ L T       
Sbjct: 271 TRGLIRLHQFHKVEMVKFSKPETSYDELEKMVANAENILQKLGLPYRVITLCTGDMGFSA 330

Query: 435 --VGSDALWDDAENIMKGV 451
                  +W  A+N  + +
Sbjct: 331 AKTYDLEVWIPAQNTYREI 349


>gi|187736593|ref|YP_001878705.1| seryl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835]
 gi|238691874|sp|B2UPP6|SYS_AKKM8 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|187426645|gb|ACD05924.1| seryl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835]
          Length = 426

 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 39/238 (16%), Positives = 89/238 (37%), Gaps = 21/238 (8%)

Query: 217 LSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI----AEDGSGVIFWHRKG 272
           L    G       E+  +         +DH +LA  + +          GSG + +   G
Sbjct: 111 LECPVGADETANPEIKLWGEKPAIENPKDHVELAANLGMISFEDGARITGSGFVVYRGAG 170

Query: 273 WKIFQTLISYM--RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + LI+++   + +++ Y+E+  P V+ +   + +G    +  +M+  +        
Sbjct: 171 ARLERALINFLLNTQTVENGYQEVGVPFVVKRECMEGTGQLPKFEEDMYGTED------- 223

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFT 387
            +   L P        ++   +    +LP+++A +   +R E   +     G++RV  F 
Sbjct: 224 -QQMFLIPTAEVPVTNLYRDTILQESDLPIKMAAYTPCFRREAGSAGRINRGMIRVHQFD 282

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALW 441
           + +       E  F E   + +   SI +  G    +++L T              +W
Sbjct: 283 KVELVQILKPEDSFRELEVLRSHAESILQKLGLHYRVIELCTGDLGFSSAKTYDIEVW 340


>gi|304439601|ref|ZP_07399505.1| histidine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
 gi|304371913|gb|EFM25515.1| histidine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
          Length = 435

 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 77/450 (17%), Positives = 141/450 (31%), Gaps = 85/450 (18%)

Query: 259 AEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRAN 317
                G +    K   +F  L+  +++  +   +  I+TP +               +A 
Sbjct: 6   PSTLPGFMELLPKDQVVFNNLLDIIKKNFERYGFLPIDTPVL--------------EKAE 51

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAV------FNHGLKSYRELPVRLAEFGSVYRN 371
           +   K   +T K +  F     +      +      +     S    P +  + G VYR 
Sbjct: 52  VLLAKGGGETEKQVYEFTKGTTDIAMRFDLTVPLARYTVEHFSDLHFPFKRYQVGKVYR- 110

Query: 372 EPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP 431
              G      R R F Q D  +    +       +   +I SI+++F F K  + ++ R 
Sbjct: 111 ---GERAQKGRYREFYQCDIDIIGNGKISLVNDAECPAVIYSIFREFDFGKFTIHINNRK 167

Query: 432 E-----------------------KRVGSDALWDD-------AENIMK------------ 449
                                    ++G D + ++       +ENI K            
Sbjct: 168 ILNGFFKSLEVKSSEEVMRIVDKLDKIGVDNVKEELDKIGMSSENIEKLISFIGIDGTKE 227

Query: 450 GVLDTIKN--SSQDRINTGVLLGEGAF-----YGPKFE---YILKDAIGRDWQCGTIQVD 499
            +LD +K      +    GV   E        YG   +     LK A G D+  GT+   
Sbjct: 228 EILDALKKLNCDNEDFKQGVEELEAVVKYMRAYGVDDDYFNIDLKIARGLDYYTGTVYET 287

Query: 500 FNLPSR------FNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI 553
           F    R          Y N        +M    +   + R    M E          + +
Sbjct: 288 FLDDHRELGSVSSGGRYDNLAGYYTTNLMPGVGMSIGLTRLFSKMQELDLIKKK--GNKV 345

Query: 554 QAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
             I+     S +E + EI   L+   +S      +  +  K +      I   ++ G+ E
Sbjct: 346 SDIIIIPMESTIEKSIEILAKLQKAGISTTIYTESGKMGKKFKYADALDIKYALVIGENE 405

Query: 614 ASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
                 G++   +   +++SL D I   +K
Sbjct: 406 LESNVFGLKNMETGDQEELSLEDIIDKFSK 435


>gi|160939113|ref|ZP_02086464.1| hypothetical protein CLOBOL_04007 [Clostridium bolteae ATCC
           BAA-613]
 gi|158438076|gb|EDP15836.1| hypothetical protein CLOBOL_04007 [Clostridium bolteae ATCC
           BAA-613]
          Length = 887

 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/134 (22%), Positives = 61/134 (45%), Gaps = 10/134 (7%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSDELAQIEK 124
             R+L    HS  H++ +A++ +  +     G  ++ G   +DF      + DE+ ++E+
Sbjct: 565 HNRALTCKNHSATHLLQKALRKVLGDHVEQAGSYVDAGRLRFDFTHFSAMTPDEIKKVEE 624

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLC 183
            + + I    P + Q ++ E+A++         K          + V + R G++  +LC
Sbjct: 625 LVNQEIQASLPVVTQVMTLEEAKKTGAMALFGEKY--------GDKVRVVRMGDFSTELC 676

Query: 184 RGPHVRSTGQVKKF 197
            G HV +TG +  F
Sbjct: 677 GGTHVPNTGTIAYF 690


>gi|219117560|ref|XP_002179573.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217408626|gb|EEC48559.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 602

 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 50/336 (14%), Positives = 103/336 (30%), Gaps = 44/336 (13%)

Query: 335 ALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
            L+P    G    F + L  S +++P  +A+ G  +RNE +   + + R R F Q +   
Sbjct: 279 YLRPETAQGIFLNFKNVLTTSRQKIPFGIAQIGKAFRNEITPR-NFIFRSREFEQMEVEY 337

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL-WDDAENIMKGVL 452
           F                   ++  F  + I    +      +  + L WD  E       
Sbjct: 338 FIPP-------------GDEVWPAFHQQWIDDSRAFLLSIGLQEELLGWDVHEGDKLAHY 384

Query: 453 DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
                    R   G     G      ++   + + G    C  +       +  N++ + 
Sbjct: 385 AQACTDITFRFPFGEQELMGIAARGNYDLS-QHSEGSGKTCSGVGTLEAFRAFLNSYAIC 443

Query: 513 --------SHSEKCHPVMIHR--AVFGSIERFIGIMI----ENFKG-------NLPLWLS 551
                      +     + H      G     + ++     E+  G            ++
Sbjct: 444 FNSVGLEYYDEQTKEKYIPHCIEPSLGVDRLMLALICSAYAEDEVGGEKRSLLKFDPKIA 503

Query: 552 PIQAIVTT---ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIII 608
           PI+  V          V  A+++ + L+    + + D     I  + R       P  + 
Sbjct: 504 PIKVAVLPLLKNKEELVSVARDLFDKLRRR-WNCQYDAAGA-IGRRYRRADEVGTPYCVT 561

Query: 609 CGDKEAS-ERSIGIRRFGSTTTQKVSLLDAIPILTK 643
                   + ++ IR   +T   ++ L D I  L++
Sbjct: 562 IDFDTIETDNAVTIRDRDTTDQVRIPLKDVISYLSE 597


>gi|238060528|ref|ZP_04605237.1| glycyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
 gi|237882339|gb|EEP71167.1| glycyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
          Length = 459

 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 48/351 (13%), Positives = 104/351 (29%), Gaps = 50/351 (14%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPS 374
            N            D     L+P    G    + +    + ++ P  +A+ G  +RNE +
Sbjct: 138 FNGLMKTYLGPVESDEGLHYLRPETAQGIFVNYKNVETVARKKPPFGIAQTGKSFRNEIT 197

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              + + R R F Q +   F              +   + Y D G  +  ++    P+  
Sbjct: 198 PG-NFIFRTREFEQMEMEFFVEPGSDEQWHEYWLSERWNWYLDLGLSEGNLRFYEHPK-- 254

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
                  +   +  K  +D              L G            + +    D    
Sbjct: 255 -------EKLSHYSKRTVDIEYRFQFGGNEFAELEG------------IANRTDFDLSTH 295

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK----------- 543
           +     +L      ++  +  E+  P +I     G     +  ++E +            
Sbjct: 296 SKHSGVDLS-----YFDQAKGERWMPYVIE-PAAGLTRAVLAFLLEAYDEDEAPNTKGGV 349

Query: 544 -----GNLPLWLSPIQAIVTTIT--SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
                      L+P++  V  ++   +    A+++A  L+     +E D     I  + R
Sbjct: 350 DKRTVMRFDPRLAPVKVAVLPLSRNEALSPKAKQLAADLRKR-WVVEFDDSQA-IGRRYR 407

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLP 647
                  P  +        + ++ +R   +   +++ L      L  E LP
Sbjct: 408 RQDEIGTPFCVTVDFDTLDDDAVTVRNRDTMAQERIGLDQVERYLI-ERLP 457


>gi|126726568|ref|ZP_01742409.1| alanyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150]
 gi|126704431|gb|EBA03523.1| alanyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150]
          Length = 886

 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/168 (22%), Positives = 70/168 (41%), Gaps = 7/168 (4%)

Query: 36  KKAVAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVA 95
           K A     +GKV       ++ + E++     R      HS  H++ EA++    +    
Sbjct: 525 KNAGLFIHHGKVVS-GTVSKDEAAELVVDHARRGAIRANHSATHLLHEALRGALGDHVSQ 583

Query: 96  IGP-IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKAREL--FES 152
            G     D   +DF      S D+L ++E+++   I +++    + ++ + AR L     
Sbjct: 584 RGSLNAADRLRFDFSHNAAISQDDLRKVEEEVNAYIRQNTEVETRIMTPDDARALGAQAL 643

Query: 153 KKEAYKVEI-LESIPAKENVTLYRQGEWF--DLCRGPHVRSTGQVKKF 197
             E Y  E+ + S+  +        GE +  +LC G HV  TG +  F
Sbjct: 644 FGEKYGDEVRVVSMGQQSGSGKGANGETYSLELCGGTHVGQTGDIGTF 691


>gi|320547963|ref|ZP_08042245.1| serine--tRNA ligase [Streptococcus equinus ATCC 9812]
 gi|320447387|gb|EFW88148.1| serine--tRNA ligase [Streptococcus equinus ATCC 9812]
          Length = 425

 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 77/199 (38%), Gaps = 16/199 (8%)

Query: 261 DGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMF 319
            GS  +F+   G ++ + + ++M     K+ Y E+  P +++      +G +  ++ + F
Sbjct: 159 TGSRFLFYKGLGARLERAIYNFMLDEHAKEGYTEVIPPYMVNHDSMFGTGQYPKFKEDTF 218

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS--- 376
            +  +D        + L P         +   +   +ELPV        +R+E   +   
Sbjct: 219 ELADSD--------YVLIPTAEVPLTNYYRGEILDGKELPVYFTAMSPSFRSEAGSAGRD 270

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR-- 434
             GL+R+  F + +   F   E  ++E  K+     +I +  G    ++ L T       
Sbjct: 271 TRGLIRLHQFHKVEMVKFSKPETSYDELEKMVVNAENILQKLGLPYRVITLCTGDMGFSA 330

Query: 435 --VGSDALWDDAENIMKGV 451
                  +W  A+N  + +
Sbjct: 331 AKTYDLEVWIPAQNTYREI 349


>gi|295400623|ref|ZP_06810600.1| glycyl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93]
 gi|294977204|gb|EFG52805.1| glycyl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93]
          Length = 460

 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 54/341 (15%), Positives = 100/341 (29%), Gaps = 46/341 (13%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T        L+P    G    F +  ++  ++LP  +A+ G  +RNE +
Sbjct: 149 FNLMFKTYQGVTESSANEIYLRPETAQGIFVNFKNVQRTMRKKLPFGIAQIGKSFRNEIT 208

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              +   R R F Q +   FC   +                   G ++  ++L       
Sbjct: 209 PG-NFTFRTREFEQMELEFFCKPGEELKWFDYWKQFCKQWLLSLGMKEENIRLRDHT--- 264

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
                         K  L    N++ D I      G G  +G       +          
Sbjct: 265 --------------KEELSHYSNATTD-IEYKFPFGWGELWG----IASRTDYDLKQHME 305

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK----------- 543
               DF        +     +E+  P  I     G+    +  MI+ +            
Sbjct: 306 YSGEDF-------RYIDQETNERYIPYCIE-PSLGADRVTLAFMIDAYDEEELEDGTTRT 357

Query: 544 -GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
              L   L+P +A V  ++    E A+ I   L  H   ++ D    +I  + R      
Sbjct: 358 VMRLHPALAPYKAAVFPLSKKLAEGARNIFADLSKH-FMVDYDETG-SIGKRYRRQDEIG 415

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            P  I        +  + +R   +    ++ +      L +
Sbjct: 416 TPFCITYDFDSEQDGMVTVRDRDTMEQVRIPISQLKSFLEE 456


>gi|148656401|ref|YP_001276606.1| proline--tRNA ligase [Roseiflexus sp. RS-1]
 gi|148568511|gb|ABQ90656.1| Proline--tRNA ligase [Roseiflexus sp. RS-1]
          Length = 571

 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 17/134 (12%), Positives = 55/134 (41%), Gaps = 5/134 (3%)

Query: 519 HPVMIHRAVFGSIERFIGIMIENFKGNLPLW---LSPIQAIVTTIT--SSAVEYAQEIAN 573
            P+ +           +  + ++   +  +W   ++P    +  +    +  + A  + +
Sbjct: 437 RPITMSLFSIALERVLLVAVEQHCDQSGIVWSPEIAPFHVHLVRLGKQDATRQAADALYD 496

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            L +  +++  D R+ET   K  +  +   P+ ++ GD+  S+  + +++  S    K  
Sbjct: 497 ELTAAGIAVLYDDRDETAGVKFNDADLIGAPLRLVIGDRFLSDGLVEVKQRASGVIAKTP 556

Query: 634 LLDAIPILTKESLP 647
             + + ++   ++P
Sbjct: 557 QSEIVAVVRALTMP 570



 Score = 46.3 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 18/109 (16%), Positives = 39/109 (35%), Gaps = 6/109 (5%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            SG +     G +  + +   +R ++     +E+  P                + +   A
Sbjct: 35  SSGALTLLPVGTRALRRIEMIVREELTRIGLQEVYLPLFRSGAPLD-----PLFSSLASA 89

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVY 369
                 T +  R+ ++ P +     ++    + SYR+LPV L +    Y
Sbjct: 90  SSILHCTDQFGRSLSILPTDEAWIASLAATEIASYRQLPVLLYQVRPTY 138


>gi|55736407|gb|AAV60049.1| seryl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
 gi|55738291|gb|AAV61932.1| seryl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
          Length = 446

 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 76/199 (38%), Gaps = 16/199 (8%)

Query: 261 DGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMF 319
            GS  +F+   G ++ + + ++M     K+ Y E+ TP +++      +G +  ++ + F
Sbjct: 180 TGSRFLFYKGLGARLERAIYNFMLDEHAKEGYTEMITPYMVNHDSMFGTGQYPKFKEDTF 239

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS--- 376
            +        D   + L P         +   +   +ELP+        +R+E   +   
Sbjct: 240 EL--------DGTDYVLIPTAEVPLTNYYRGEILDGKELPIYFTALSPSFRSEAGSAGRD 291

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR-- 434
             GL+R+  F + +   F   E  ++E  K+     +I +       ++ L T       
Sbjct: 292 TRGLIRLHQFHKVEMVKFSKPEDSYDELEKMVVNAENILQKLNLPYRVITLCTGDMGFSA 351

Query: 435 --VGSDALWDDAENIMKGV 451
                  +W  A+N  + +
Sbjct: 352 AKTYDLEVWIPAQNTYREI 370


>gi|86134575|ref|ZP_01053157.1| glycyl-tRNA synthetase [Polaribacter sp. MED152]
 gi|85821438|gb|EAQ42585.1| glycyl-tRNA synthetase [Polaribacter sp. MED152]
          Length = 515

 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 56/341 (16%), Positives = 109/341 (31%), Gaps = 27/341 (7%)

Query: 308 SGHWDSYRA-NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEF 365
           S +W   +  N+        + ++     L+P    G    F +  K+   ++P  +A+ 
Sbjct: 186 SKNWTEVKQFNLMFGTQIGASAENSTQVYLRPETAQGIFVNFLNVQKTGRMKIPFGIAQT 245

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
           G  +RNE   +   + R+R F Q +   F                 +  +   G  +   
Sbjct: 246 GKAFRNEIV-ARQFIFRMREFEQMEMQFFVKPGTQKEWYNSWKETRLKWHLSLGMGEENY 304

Query: 426 KLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKD 485
           +     +    +DA  D                 +     G    EG     + ++ LK 
Sbjct: 305 RFHDHDKLAHYADAAADI----------------EFNFPFGFKELEGIH--SRTDFDLK- 345

Query: 486 AIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
               ++    +Q   +  ++    YV   S     + +        E  +          
Sbjct: 346 -AHEEFSGKKLQYFDHEENKSYVPYVVETSIGLDRMFLAVFSKSLQEEELENGTTRTVLK 404

Query: 546 LPLWLSPIQAIV--TTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           LP  L+P +A V          E A++I   LK    ++  D ++  +  + R       
Sbjct: 405 LPAVLAPFKAAVFPLVKKDGLPEVAKQIVEDLK-WDFNVFYDEKDA-VGKRYRRQDAAGT 462

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P  I        + S+ IR   S   ++V + D   I+  E
Sbjct: 463 PFCITVDHDSLEDDSVTIRHRDSMDQKRVKISDLRAIIKAE 503


>gi|297566580|ref|YP_003685552.1| glycyl-tRNA synthetase [Meiothermus silvanus DSM 9946]
 gi|296851029|gb|ADH64044.1| glycyl-tRNA synthetase [Meiothermus silvanus DSM 9946]
          Length = 507

 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 54/384 (14%), Positives = 118/384 (30%), Gaps = 46/384 (11%)

Query: 288 KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
           +   + +N  +V+D               NM           +     L+P    G    
Sbjct: 139 ERAAQAMNAARVVDPADGAPGDWTPPRPFNMMFKTTIGPVADEDSYGYLRPETAQGIFVN 198

Query: 348 FNHGLKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
           F + L S  R LP  +A+ G  +RNE +   + + RVR F Q +   F       +    
Sbjct: 199 FKNVLDSTSRRLPFGIAQIGKAFRNEITPR-NFIFRVREFEQMEIEYFVKPGTDEHWHQH 257

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
                +  ++  G  +  +++   P++     A +      +     T+     + I   
Sbjct: 258 WLETRLEWWEAQGIPRAQIQVLDVPKE---DLAHYSKRTYDLLYNFPTLGFEEIEGIANR 314

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
                G+    + E  ++  +  +    T ++    P            +   P +I   
Sbjct: 315 SDYDLGSHTKAQSELGIQARVM-ENTDSTAKLAIQDPET---------GKWIVPFVIE-P 363

Query: 527 VFGSIERFIGIMIENFK------------GNLPLWLSPIQAIVTT---ITSSAVEYAQEI 571
             G     + ++ E +               L   L+PI+  V            YA+++
Sbjct: 364 SAGVDRGVLAVLSEAYTREKLESGEERIVLKLKPHLAPIKVAVIPLAKNKEEITRYAKDL 423

Query: 572 ANLLKSHHL-SIETDFRNETINYKIREHSIKKIPIIIIC-----GDKEASER------SI 619
              L++  +  +  +     I    R H     P  +       G     +       ++
Sbjct: 424 KRKLQALGMGRVLYEDTGN-IGKAYRRHDEVGTPFCVTVDYDTIGKS--QDGSTTLMDTV 480

Query: 620 GIRRFGSTTTQKVSLLDAIPILTK 643
            +R   +   ++V + +    L +
Sbjct: 481 TVRDRDTMQQERVHVKELPQYLQE 504


>gi|317484483|ref|ZP_07943393.1| tRNA synthetase class II [Bilophila wadsworthia 3_1_6]
 gi|316924259|gb|EFV45435.1| tRNA synthetase class II [Bilophila wadsworthia 3_1_6]
          Length = 884

 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/151 (21%), Positives = 59/151 (39%), Gaps = 4/151 (2%)

Query: 48  CDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYY 106
            D    + +  + +   E  R  A   H+C H++  A++ +  +     G  +  D   +
Sbjct: 543 VDGGTLLSDQEVVLTVTESIRLDAARNHTCTHLLHAALRRVLGDHVRQAGSLVTPDRLRF 602

Query: 107 DFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIP 166
           DF    P + +ELA +E+ +   I  D P   + +  + A ++        K      + 
Sbjct: 603 DFSHIAPMTPEELAAVERDVNAAIMADYPLTAKLMGQQAAIDMGAMALFGEKYGDTVRVV 662

Query: 167 AKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
               +      E  +LC G H+ STGQ   F
Sbjct: 663 ---TIGNPDHTESVELCGGTHLHSTGQAGSF 690


>gi|289642681|ref|ZP_06474821.1| glycyl-tRNA synthetase [Frankia symbiont of Datisca glomerata]
 gi|289507511|gb|EFD28470.1| glycyl-tRNA synthetase [Frankia symbiont of Datisca glomerata]
          Length = 461

 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 48/332 (14%), Positives = 106/332 (31%), Gaps = 49/332 (14%)

Query: 335 ALKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
            L+P    G    + +    + R+ P  + + G  +RNE +   + + R R F Q +   
Sbjct: 159 YLRPETAQGIFINYANVQATARRKPPFGIGQIGKSFRNEITPG-NFIFRTREFEQMEMEF 217

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
           F    +         +     Y D G     ++    P+         +   +  K  +D
Sbjct: 218 FVPPGEDETWHQYWIDERTKWYHDLGVRPENLRHFEHPK---------EKLSHYSKRTVD 268

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS 513
                    +  G L G             K A G D                  ++  +
Sbjct: 269 IEYRFDFVGLEWGELEGIANRTDYDLSVHAK-ASGADLT----------------YFEQA 311

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL----------------SPIQAIV 557
              +  P +I     G     +  +++ +  +                     +P++A V
Sbjct: 312 TGTRYTPYVIE-PAAGVDRATLVFLLDAYAEDTAPNTKGGVDRRVVLRLDRRLAPVKAAV 370

Query: 558 TTITSSAV--EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEAS 615
             ++ +A     A+++A  L+ H  +++ D     I  + R       P  +        
Sbjct: 371 LPLSRNADLSPVARDLAAALRRH-WNVDFDDAGA-IGRRYRRQDEIGTPFCLTVDFDSLQ 428

Query: 616 ERSIGIRRFGSTTTQKVSLLDAIPILTKESLP 647
           ++++ IR   +   ++V++  A+  L  +  P
Sbjct: 429 DQAVTIRERDTMAQERVAMDQAVSYLNAKLGP 460


>gi|289168522|ref|YP_003446791.1| seryl-tRNA synthetase [Streptococcus mitis B6]
 gi|288908089|emb|CBJ22929.1| seryl-tRNA synthetase [Streptococcus mitis B6]
          Length = 424

 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/193 (16%), Positives = 75/193 (38%), Gaps = 16/193 (8%)

Query: 267 FWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD 325
           F+   G ++ + + ++M     K+ Y E+ TP +++      +G +  ++ + F +  ++
Sbjct: 165 FYKGLGARLERAIYNFMLDEHGKEGYTEVITPYMVNHDSMFGTGQYPKFKEDTFELSDSN 224

Query: 326 DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMR 382
                   + L P         +   +   ++LP+        +R+E   +     GL+R
Sbjct: 225 --------YVLIPTAEVPLTNYYRDEILDGKDLPIYFTAMSPSFRSEAGSAGRDTRGLIR 276

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSD 438
           +  F + +   F   E+ + E  K+     +I +       +V LST             
Sbjct: 277 LHQFHKVEMVKFAKPEESYEELEKMTANAENILQKLNLPYRVVALSTGDMGFSAAKTYDL 336

Query: 439 ALWDDAENIMKGV 451
            +W  A+N  + +
Sbjct: 337 EVWIPAQNTYREI 349


>gi|288555365|ref|YP_003427300.1| histidyl-tRNA synthetase [Bacillus pseudofirmus OF4]
 gi|288546525|gb|ADC50408.1| histidyl-tRNA synthetase [Bacillus pseudofirmus OF4]
          Length = 426

 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 66/422 (15%), Positives = 139/422 (32%), Gaps = 59/422 (13%)

Query: 269 HRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
                +I+Q +    +      +Y+EI TP      ++ +         ++   +    T
Sbjct: 13  LPGEIEIWQYIEQKSKEICSRYNYKEIRTPIFEHTEVFARGVGET---TDIVQKEMYTFT 69

Query: 328 IKDLRTFALKPMNCPGHVAVF-NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
            +  R+  L+P    G V  F  + L      P +L   G ++R E   +     R+R F
Sbjct: 70  DRGERSLTLRPEGTAGVVRSFVGNKLYGEASQPTKLFYTGPMFRYERPQA----GRMRQF 125

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI---MVKLSTRPEKRVGSDALWDD 443
            Q       + +   +   ++  L++SIY + G   I   +  L  +  +    DAL + 
Sbjct: 126 VQFGVEALGSADPAIDA--EVLALVMSIYYELGLTDIKLVLNSLGDKESREAHRDALINH 183

Query: 444 AENIMKGVLDTIKNSSQDR---------------------INTGVLLGEGAFYGPKFEYI 482
            +  +       +N  +                       I+        A++  K    
Sbjct: 184 FKPSIGEFCSDCQNRLEKNPLRILDCKKDREHPLMQTAPSIHDYYTEESAAYF--KEVKQ 241

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK--------------------CHPVM 522
             D +   +      V         AF V +  E                       P  
Sbjct: 242 HLDQMNLPYVVDPTLVRGLDYYNHTAFEVMAEGEGFGAITTLCGGGRYNGLVQEFGGPET 301

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSI 582
                  SIER I  +    +G +P + + +   + T+  +A   + E+   L+   +  
Sbjct: 302 PGIGFAFSIERLIMAL--KAQGKVPDFGNQLDCFLVTLGDAAKAKSVELLYQLRQAGIRC 359

Query: 583 ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           + D+ ++ +  + +      +    I GD E +E  I ++   +    +V+L   I  + 
Sbjct: 360 DKDYLDKKMKAQFKAADRLNVRYTAILGDNELNENRINVKNMETGEQVEVALDTFITYMK 419

Query: 643 KE 644
           ++
Sbjct: 420 EQ 421


>gi|256396139|ref|YP_003117703.1| glycyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
 gi|256362365|gb|ACU75862.1| glycyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
          Length = 460

 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 52/383 (13%), Positives = 117/383 (30%), Gaps = 57/383 (14%)

Query: 277 QTLISYMRRKIK---DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
             + +Y  +  +       +IN P   ++  + +         N+        T+ D   
Sbjct: 102 HLIEAYEAKHNRVPERGLADINCPNCGNKGTFTEPKV-----FNLMLQTHLGVTMDDAGL 156

Query: 334 FALKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
             L+P    G    +      S ++ P  + + G  +RNE +   + + R R F Q +  
Sbjct: 157 AYLRPETAQGIFVSYKTVRDASRKKPPFGIGQIGKSFRNEITPG-NFIFRTREFEQMEME 215

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
            F    +         N   + + D G +   ++    P          +   +  K  +
Sbjct: 216 FFVKPGEDEQWFEYWLNERYNWWTDLGLKPENLRFFEHPA---------EKLSHYSKRTV 266

Query: 453 DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
           D     +        L G            + +    D          +           
Sbjct: 267 DIEYRFNFGGQEFSELEG------------VANRTDFDLSTHAKHSGEDFTQ-----LEQ 309

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW----------------LSPIQAI 556
              E+  P ++     G     +  +++ +  +                    L+P++A 
Sbjct: 310 ETGERWTPFVVE-PAAGVNRGMLAFLLDAYAEDEAPNAKGQMEVRKVLRLDKRLAPVKAA 368

Query: 557 VTTITSSAV--EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
           V  ++ +      A+++A LL+ +  ++E D     I  + R       P  I       
Sbjct: 369 VLPLSRNVDLSPKARDLAQLLRKN-WNVEFDDAGA-IGRRYRRQDEIGTPFCITVDFDTL 426

Query: 615 SERSIGIRRFGSTTTQKVSLLDA 637
            ++++ +R   S   Q+V+L   
Sbjct: 427 DDQAVTVRERDSMEQQRVALDQV 449


>gi|322373920|ref|ZP_08048455.1| serine--tRNA ligase [Streptococcus sp. C150]
 gi|321277292|gb|EFX54362.1| serine--tRNA ligase [Streptococcus sp. C150]
          Length = 425

 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/222 (17%), Positives = 83/222 (37%), Gaps = 20/222 (9%)

Query: 242 EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINT 296
           E + H  L  ++ +          GS  +F+   G K+ + + ++M     K+ Y E+ T
Sbjct: 136 EIKPHWDLGEDLGILDWERGAKVTGSRFLFYKGLGAKLERAIYNFMLDEHAKEGYTEMIT 195

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +++      +G +  ++ + F +        D   + L P         +   +   +
Sbjct: 196 PYMVNHDSMFGTGQYPKFKEDTFEL--------DGTDYVLIPTAEVPLTNYYRGEILDGK 247

Query: 357 ELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           ELP+        +R+E   +     GL+R+  F + +   F   E  ++E  K+     +
Sbjct: 248 ELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFSKPESSYDELEKMVVNAEN 307

Query: 414 IYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
           I +       ++ L T              +W  A+N  + +
Sbjct: 308 ILQKLNLPYRVITLCTGDMGFSAAKTYDLEVWIPAQNTYREI 349


>gi|288904563|ref|YP_003429784.1| seryl-tRNA synthetase [Streptococcus gallolyticus UCN34]
 gi|288731288|emb|CBI12838.1| seryl-tRNA synthetase [Streptococcus gallolyticus UCN34]
          Length = 425

 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 77/199 (38%), Gaps = 16/199 (8%)

Query: 261 DGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMF 319
            GS  +F+   G ++ + + ++M     K+ Y E+  P +++      +G +  ++ + F
Sbjct: 159 TGSRFLFYKGLGARLERAIYNFMLDEHAKEGYTEVIPPYMVNHDSMFGTGQYPKFKEDTF 218

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS--- 376
            +  +D        + L P         +   +   +ELPV        +R+E   +   
Sbjct: 219 ELADSD--------YVLIPTAEVPLTNYYRGEILDGKELPVYFTAMSPSFRSEAGSAGRD 270

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR-- 434
             GL+R+  F + +   F   E  ++E  K+     +I +  G    ++ L T       
Sbjct: 271 TRGLIRLHQFHKVEMVKFSKPETSYDELEKMVANAENILQKLGLPYRVITLCTGDMGFSA 330

Query: 435 --VGSDALWDDAENIMKGV 451
                  +W  A+N  + +
Sbjct: 331 AKTYDLEVWIPAQNTYREI 349


>gi|270293326|ref|ZP_06199535.1| serine--tRNA ligase [Streptococcus sp. M143]
 gi|270278175|gb|EFA24023.1| serine--tRNA ligase [Streptococcus sp. M143]
          Length = 424

 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/193 (16%), Positives = 74/193 (38%), Gaps = 16/193 (8%)

Query: 267 FWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD 325
           F+   G ++ + + ++M     K+ Y E+ TP +++      +G +  ++ + F +   +
Sbjct: 165 FYKGLGARLERAIYNFMLDEHGKEGYTEVITPYMVNHDSMFGTGQYPKFKEDTFELSDTN 224

Query: 326 DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMR 382
                   + L P         +   +   ++LP+        +R+E   +     GL+R
Sbjct: 225 --------YVLIPTAEVPLTNYYRDEILDGKDLPIYFTAMSPSFRSEAGSAGRDTRGLIR 276

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSD 438
           +  F + +   F   E+ + E  K+     +I +       +V LST             
Sbjct: 277 LHQFHKVEMVKFAKPEESYEELEKMTANAENILQKLNLPYRVVALSTGDMGFSAAKTYDL 336

Query: 439 ALWDDAENIMKGV 451
            +W  A+N  + +
Sbjct: 337 EVWIPAQNTYREI 349


>gi|145223306|ref|YP_001133984.1| glycyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
 gi|315443766|ref|YP_004076645.1| glycyl-tRNA synthetase [Mycobacterium sp. Spyr1]
 gi|145215792|gb|ABP45196.1| glycyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
 gi|315262069|gb|ADT98810.1| glycyl-tRNA synthetase [Mycobacterium sp. Spyr1]
          Length = 467

 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 56/356 (15%), Positives = 119/356 (33%), Gaps = 21/356 (5%)

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
           +E+   +++      +    +    NM           +     L+P    G    F + 
Sbjct: 122 DEVPMGEIVCPDCGTKGQWTEPRDFNMMLKTYLGPIESEEGLHYLRPETAQGIFVNFANV 181

Query: 352 LKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
           + +  ++ P  + + G  +RNE +   + + R R F Q +   F                
Sbjct: 182 VTTARKKPPFGIGQIGKSFRNEITPG-NFIFRTREFEQMEMEFFVEPSTAAEWHKYWIET 240

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRV--GSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
            +  Y D G E+  ++L   P++++   SD   D             +           L
Sbjct: 241 RLQWYVDLGIERDNLRLYEHPKEKLSHYSDGTTDIEYKFGFAGNPWGELEGIANRTNFDL 300

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
                  G    +  + A  R      I+    L     AF V++++E   P        
Sbjct: 301 STHSQHSGVDLSFYDQAADTRYVP-YVIEPAAGLTRSLMAFLVDAYTEDEAPNAKG---- 355

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT--SSAVEYAQEIANLLKSHHLSIETDF 586
           G  +R +          L   L+P++A V  ++  +     A+++A  L+    ++E D 
Sbjct: 356 GVDKRTV--------LRLDPRLAPVKAAVLPLSRHADLSPKARDLAAELRQS-WNVEFDD 406

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
               I  + R       P  I        + ++ IR   + + +++++ +    L 
Sbjct: 407 AGA-IGRRYRRQDEIGTPYCITVDFDSLEDHAVTIRERDAMSQERIAISEVSNYLA 461


>gi|313205851|ref|YP_004045028.1| histidyl-tRNA synthetase [Riemerella anatipestifer DSM 15868]
 gi|312445167|gb|ADQ81522.1| histidyl-tRNA synthetase [Riemerella anatipestifer DSM 15868]
 gi|315022754|gb|EFT35778.1| histidyl-tRNA synthetase [Riemerella anatipestifer RA-YM]
 gi|325336712|gb|ADZ12986.1| Histidyl-tRNA synthetase [Riemerella anatipestifer RA-GD]
          Length = 452

 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 48/337 (14%), Positives = 102/337 (30%), Gaps = 62/337 (18%)

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
            P +  +   V+R +         R R F Q DA V  ++     + +++  L +  + +
Sbjct: 118 FPYKRYQIQPVWRADRPQK----GRFREFYQCDADVVGSE--SLWQEVELVQLYLKSFAE 171

Query: 418 FGFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGV---------------------- 451
              +  +   + +         G      D    +  +                      
Sbjct: 172 LNLDVKIHINNRKILSGLATYAGIAEQLVDFTVALDKLDKIGKEGVIEELKSKNIPSEAI 231

Query: 452 --LDTIKNSSQDRINTGVLLGEGAFY---GPK----FEYILKDAIGRDWQCGTIQVDFNL 502
             L+ + +  +D +     L E       G K     E+++K  +        +Q D  L
Sbjct: 232 EKLEFLFHPLEDNLEYLSALKERFSDIEIGLKGVEEVEFVIKQCLALGVSPEVLQFDITL 291

Query: 503 PSRFN-----AFYVNSHSEKC------------HPVMIHRAVFGSIERF----IGIMIEN 541
               +      F V S+  +               V   + + G    F    I +++E 
Sbjct: 292 ARGLDYYTGAIFEVKSNEVQLGSIGGGGRYDNLTEVFGVKNIPGIGISFGLDRIYLVMEE 351

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
                      +Q +          YA +I   L++  +S E       +  +      K
Sbjct: 352 LNRFPQEVSQNVQYLFANYGEQEAFYAMDIIQQLRTKGVSAELYPEAAKLKKQFTYAEKK 411

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
            IP I+  G++E   + + I+   +     ++L D  
Sbjct: 412 GIPYIVFVGEEEIKNKQVSIKNLETGEQNSLTLEDFF 448


>gi|271963873|ref|YP_003338069.1| anticodon binding domain-containing protein [Streptosporangium
           roseum DSM 43021]
 gi|270507048|gb|ACZ85326.1| anticodon binding domain protein [Streptosporangium roseum DSM
           43021]
          Length = 461

 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 49/315 (15%), Positives = 108/315 (34%), Gaps = 23/315 (7%)

Query: 335 ALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
            L+P    G    + +  +S  +++P  + + G  +RNE +   + + R R F Q +   
Sbjct: 160 YLRPETAQGIFINYLNVQQSARKKIPFGIGQIGKSFRNEITPG-NFIFRTREFEQMEMEF 218

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
           F              +     Y D G  +  +++   P+         +   +  K  +D
Sbjct: 219 FVKPGTDEEWHQYWIDERFRWYTDLGISQDNLRIYEHPQ---------EKLSHYSKRTVD 269

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS 513
                +      G L G       + ++ L  A G+         + +   R+  + +  
Sbjct: 270 IEYRFNFTGSEWGELEGVAN----RTDFDL-TAHGKASGTDLSFFEQDTGERYVPYVIEP 324

Query: 514 HSEKCHPVM---IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAV--EYA 568
            +      +   +            G+M +     L   L+P++  V  ++ +A     A
Sbjct: 325 AAGVDRATLTFLLDAYTEDEAPNAKGVMEKRTVMRLDHRLAPVKVAVLPLSRNADLSPKA 384

Query: 569 QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
           +++A  L+    ++E D     I  + R       P  I        ++++ IR   S  
Sbjct: 385 KDLAAQLRRR-WNVEFDDAGA-IGRRYRRQDEIGTPFCITVDFDTLDDQAVTIRERDSMA 442

Query: 629 TQKVSLLDAIPILTK 643
            ++V+L      L +
Sbjct: 443 QERVALDQVEAYLRQ 457


>gi|16081356|ref|NP_393684.1| glycyl-tRNA synthetase [Thermoplasma acidophilum DSM 1728]
 gi|10639350|emb|CAC11352.1| glycyl-tRNA synthetase related [Thermoplasma acidophilum]
          Length = 476

 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 67/472 (14%), Positives = 143/472 (30%), Gaps = 82/472 (17%)

Query: 241 SEKRDHRKLAREMDLFHIAED----GSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEIN 295
               D  +LA+    F  +       SG   +   G  +   +I+  +R+  ++    ++
Sbjct: 1   MSFDDVIELAKRRGFFWPSYMIYGGSSGFYDYGPLGTLLKDNIIAAWKREYAREGAIFLD 60

Query: 296 TPQVLDQHLWQQSGHWDSYRA-------------------------------------NM 318
           TP +    +++ SGH + +                                         
Sbjct: 61  TPVISPADVFRASGHLEKFSDIAVKCSKCGTPYKFESLIKSLGINEIAKTVDEAAAILEK 120

Query: 319 FAVKCADDTIKDLRTF-------------ALKPMNCPGHVAVFNHGLK-SYRELPVRLAE 364
           + VKC     K    +              L+P    G    F +    +   +P+ + +
Sbjct: 121 YDVKCPKCGEKLKNPYDFNLMFRVGSNDLYLRPETAQGIFINFKNLYNYARNSMPIIVCQ 180

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
            G  +RNE S     L+R+R F+Q +  VF  +   F        L  ++ ++ G    M
Sbjct: 181 VGKGFRNEISPR-QALIRMREFSQAEVEVFYIENDDFPIPDSSVEL--NMLRNTGDLLKM 237

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP-KFEYIL 483
                     +G+  +     N    +L  +              GE A Y    +++  
Sbjct: 238 KVSDALRSGIIGNRVM-AYFLNKTYEILLKLGFQPDHIRAREHDPGERAHYSSETWDFEY 296

Query: 484 KDAIGRDWQCGTIQ----VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
               G   +   +      D     +F+             V     +    +R +  ++
Sbjct: 297 L-LDGDWTEIVGVSDRGTYDLGRHQQFSGENFQIDGRTPKVVEPSYGL----DRILLTIM 351

Query: 540 ENFK---------GNLPLWLSPIQAIVTTIT--SSAVEYAQEIANLLKSHHLSIETDFRN 588
           ++             L   +SPI   +  +       + A+++   +K+    I  D   
Sbjct: 352 DSSYYRRENGYKVLRLDPHISPIHMAIFPLQKRDDLDKIAKDLFEKMKNIDPFIFYDDSG 411

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
             I  +         P  +    +   + ++ IR   ST+  +V + D +  
Sbjct: 412 N-IGRRYARQDEIGTPFCVTVDYQTKDDETVTIRERDSTSQVRVKISDLLER 462


>gi|294675495|ref|YP_003576111.1| glycine--tRNA ligase [Prevotella ruminicola 23]
 gi|294472490|gb|ADE81879.1| glycine--tRNA ligase [Prevotella ruminicola 23]
          Length = 513

 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 55/345 (15%), Positives = 112/345 (32%), Gaps = 54/345 (15%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        +        L+P    G    + +  K+   ++P  +A+ G  +RNE  
Sbjct: 194 FNLMFATEMGASADASMKVYLRPETAQGIFVNYLNVQKTGRMKIPFGIAQIGKAFRNEIV 253

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
            +   + R+R F Q +   F     E  +    K   +       FG E        +  
Sbjct: 254 -ARQFIFRMREFEQMEMQFFVAPGTELEWFPKWKETRMKWHQALGFGAENYRFHDHEKLA 312

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
                    + A +I            + ++  G    EG      F+            
Sbjct: 313 HYA------NAATDI------------EFKMPFGFKEVEGIHSRTNFD------------ 342

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK--------- 543
              +        +   ++    +E   P +I  ++ G    F+ IM   F+         
Sbjct: 343 ---LSQHEKFSGKSIKYFDPQTNESYTPYVIETSI-GVDRMFLSIMCHAFEEEKLENGET 398

Query: 544 ---GNLPLWLSPIQAIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
                LP  L+P++  V  +       E A+EI + LK  H + + D ++ +I  + R  
Sbjct: 399 RTVLKLPAALAPVKCAVMPLVKKDGLPEKAREIIDQLK-FHFNCQYDEKD-SIGKRYRRQ 456

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
                P  +       ++  + +R   +   ++V++ D   I+  
Sbjct: 457 DAIGTPYCVTVDHDTLTDGKVTLRFRDTMEQERVNISDLNSIIED 501


>gi|148545053|ref|YP_001272423.1| histidyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
 gi|184154386|ref|YP_001842727.1| histidyl-tRNA synthase [Lactobacillus reuteri JCM 1112]
 gi|227364203|ref|ZP_03848299.1| histidyl-tRNA synthetase [Lactobacillus reuteri MM2-3]
 gi|325683406|ref|ZP_08162922.1| histidine--tRNA ligase [Lactobacillus reuteri MM4-1A]
 gi|148532087|gb|ABQ84086.1| histidyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
 gi|183225730|dbj|BAG26247.1| histidyl-tRNA synthase [Lactobacillus reuteri JCM 1112]
 gi|227070748|gb|EEI09075.1| histidyl-tRNA synthetase [Lactobacillus reuteri MM2-3]
 gi|324977756|gb|EGC14707.1| histidine--tRNA ligase [Lactobacillus reuteri MM4-1A]
          Length = 425

 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 65/420 (15%), Positives = 133/420 (31%), Gaps = 63/420 (15%)

Query: 269 HRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
                 I++ +    R       Y  I TP       +          +++   +  D  
Sbjct: 13  LPGTTSIWEKVEQNAREVFNQFGYRGIRTPMF---EDYHVFSRNVGDTSDIVEKEMYDFH 69

Query: 328 IKDLRTFALKPMNCPGHVAVF--NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRG 385
            K  R  AL+P    G V  +  N         P ++   G ++R E   S     R R 
Sbjct: 70  DKGDRHIALRPEGTAGVVRAYVENKLYGPEYPKPYKVYYMGPMFRYERPQS----GRQRE 125

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
           F Q    V     +     +++ ++ ++++K FG   + + ++T  +K+V  D   +   
Sbjct: 126 FHQIG--VEALNNESPQIDVEVISMAMALFKKFGVPNVKLVINTLGDKKVREDYR-EALI 182

Query: 446 NIMKGVLDTIKNSSQDRI--------------------------NTGVLLGEGAFY---- 475
           N +K   D +   SQ+R+                          +      +  F     
Sbjct: 183 NYLKPHYDELSKDSQERLYKNPLRVLDSKDEGDKKIVAEAPSILDYLDEESQAYFDEVQA 242

Query: 476 -----GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN------SHS---EKCHPV 521
                G  FE       G D+   TI    +    F   Y         +    +   P 
Sbjct: 243 LLNKLGIDFEIDTNMVRGLDYYNHTIFEIMSDSPVFGGGYTTVCAGGRYNGLISQLGGPE 302

Query: 522 MIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA--VEYAQEIANLLKSHH 579
                    +ER + ++ E      P +    Q  V   ++     E A E+ + ++   
Sbjct: 303 EGGIGFGMGVERLMLLLQEEN----PAFAPQDQLDVFFASADQQGDEMAFEVLSKIRQQG 358

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
           +  + D+    +  +I+E   +      + G +E  E +  ++   +     + + D + 
Sbjct: 359 IVADKDYSGVKVGKQIKEAFRRNAKYFAVFGAREVEEGTFQLKNAATKDATTIKVSDFVA 418


>gi|84686864|ref|ZP_01014748.1| alanyl-tRNA synthetase [Maritimibacter alkaliphilus HTCC2654]
 gi|84665061|gb|EAQ11541.1| alanyl-tRNA synthetase [Rhodobacterales bacterium HTCC2654]
          Length = 882

 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/152 (21%), Positives = 65/152 (42%), Gaps = 5/152 (3%)

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDE 118
           E+    D RS     HS  H++ EA++    +     G     D   +DF   +  ++DE
Sbjct: 546 ELTVEHDRRSAIRANHSATHLLHEALREALGDHVAQRGSLNAPDRLRFDFSHNKALTADE 605

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYK----VEILESIPAKENVTLY 174
           + ++E+ +   + +++P   + ++ + AR L        K    V ++    A     + 
Sbjct: 606 IGRVERDVNAYVRQNTPVETRIMAPDDARALGAQALFGEKYGDEVRVVSMGRAATGKGVD 665

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGA 206
           ++    +LC G HV+ TG +  F    + A +
Sbjct: 666 KETYSIELCGGTHVKRTGDIGAFVLTAESASS 697


>gi|145218843|ref|YP_001129552.1| glycyl-tRNA synthetase [Prosthecochloris vibrioformis DSM 265]
 gi|145205007|gb|ABP36050.1| glycyl-tRNA synthetase [Chlorobium phaeovibrioides DSM 265]
          Length = 489

 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 46/345 (13%), Positives = 103/345 (29%), Gaps = 51/345 (14%)

Query: 308 SGHWDSYRA-NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH-GLKSYRELPVRLAEF 365
           SG W   R  N+              T  L+P    G    F++    S  ++P  +A+ 
Sbjct: 170 SGDWTDVRQFNLMFQCDMGAVADTSGTVYLRPETAQGIFVNFHNVREASRMKVPFGIAQI 229

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY-KDFGFEKIM 424
           G  +RNE     + + R+  F Q +   F                  + Y    G     
Sbjct: 230 GKAFRNEIVKG-NFIFRMVEFEQMEMQYFVKPGTQVEAFEAWREERFNWYTSSLGISPEK 288

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +      +    +D  +D                 +     G+   EG      F+    
Sbjct: 289 LHWYKHDKLAHYADLAYDI----------------KFEFPFGIEEIEGIHSRTDFD---- 328

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK- 543
                      +        +   +     +E+  P ++  +  G    F+ ++ + +  
Sbjct: 329 -----------LSQHQQFSGKNMEYVDQVTNERYTPYVVETSA-GCDRLFLALLSDAYHE 376

Query: 544 ----------GNLPLWLSPIQAIVTTITS--SAVEYAQEIANLLKSHHLSIETDFRNETI 591
                       L   ++P++A V  +       E A+++   L      ++ D    +I
Sbjct: 377 DVVDGEERVLLKLAPKVAPVKAAVLPLMKKGEMAEVAEKLRAELSEQ-FLVQYDDAA-SI 434

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
             + R       P       +   + +I +R   +   +++++ +
Sbjct: 435 GKRYRRQDEIGTPFCFTVDHQTIEDGTITVRYRDTAAQERINITE 479


>gi|307704266|ref|ZP_07641185.1| seryl-tRNA synthetase [Streptococcus mitis SK597]
 gi|307622177|gb|EFO01195.1| seryl-tRNA synthetase [Streptococcus mitis SK597]
          Length = 424

 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/193 (16%), Positives = 75/193 (38%), Gaps = 16/193 (8%)

Query: 267 FWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD 325
           F+   G ++ + + ++M     K+ Y E+ TP +++      +G +  ++ + F +  ++
Sbjct: 165 FYKGLGARLERAIYNFMLDEHGKEGYTEVITPYMVNHDSMFGTGQYPKFKEDTFELSDSN 224

Query: 326 DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMR 382
                   + L P         +   +   ++LP+        +R+E   +     GL+R
Sbjct: 225 --------YVLIPTAEVPLTNYYRDEILDGKDLPIYFTAMSPSFRSEAGSAGRDTRGLIR 276

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSD 438
           +  F + +   F   E+ + E  K+     +I +       +V LST             
Sbjct: 277 LHQFHKVEMVKFAKPEESYEELEKMTANAENILQKLNLPYRVVALSTGDMGFSAAKTYDL 336

Query: 439 ALWDDAENIMKGV 451
            +W  A+N  + +
Sbjct: 337 EVWIPAQNTYREI 349


>gi|228476564|ref|ZP_04061246.1| seryl-tRNA synthetase [Streptococcus salivarius SK126]
 gi|228251759|gb|EEK10824.1| seryl-tRNA synthetase [Streptococcus salivarius SK126]
          Length = 425

 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 76/199 (38%), Gaps = 16/199 (8%)

Query: 261 DGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMF 319
            GS  +F+   G K+ + + ++M     K+ Y E+ TP +++      +G +  ++ + F
Sbjct: 159 TGSRFLFYKGLGAKLERAIYNFMLDEHAKEGYTEMITPYMVNHDSMFGTGQYPKFKEDTF 218

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS--- 376
            +        D   + L P         +   +   +ELP+        +R+E   +   
Sbjct: 219 EL--------DGTDYVLIPTAEVPLTNYYRGEILDGKELPIYFTAMSPSFRSEAGSAGRD 270

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR-- 434
             GL+R+  F + +   F   E  ++E  K+     +I +       ++ L T       
Sbjct: 271 TRGLIRLHQFHKVEMVKFSKPEDSYDELEKMVVNAENILQKLNLPYRVITLCTGDMGFSA 330

Query: 435 --VGSDALWDDAENIMKGV 451
                  +W  A+N  + +
Sbjct: 331 AKTYDLEVWIPAQNTYREI 349


>gi|41408235|ref|NP_961071.1| glycyl-tRNA synthetase [Mycobacterium avium subsp. paratuberculosis
           K-10]
 gi|59798571|sp|Q73Y21|SYG_MYCPA RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|41396590|gb|AAS04454.1| GlyS [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 463

 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 54/342 (15%), Positives = 109/342 (31%), Gaps = 22/342 (6%)

Query: 307 QSGHWDS-YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAE 364
           + G W      NM           +     L+P    G    F + + +  ++ P  + +
Sbjct: 132 EPGRWTEPREFNMMLKTYLGPIETEEGLHYLRPETAQGIFVNFANVVTTARKKPPFGIGQ 191

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
            G  +RNE +   + + R R F Q +   F              +  +  Y + G +   
Sbjct: 192 IGKSFRNEITPG-NFIFRTREFEQMEMEFFVEPSTAKEWHQYWIDTRLQWYVELGIDPQN 250

Query: 425 VKLSTRPEKRV--GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           ++L   P  ++   SD   D             +           L       G    + 
Sbjct: 251 LRLFEHPADKLSHYSDRTVDIEYKFGFAGNPWGELEGVANRTDFDLSTHSKHSGVDLSFY 310

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
            +    R      I+    L   F AF ++++ E   P               G M +  
Sbjct: 311 DQATDSRYIP-YVIEPAAGLTRSFMAFLIDAYVEDEAPNAK------------GKMEKRA 357

Query: 543 KGNLPLWLSPIQAIVTTIT--SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              L   L+P++A V  ++  +     A+++A  L+    +IE D     I  + R    
Sbjct: 358 VLRLDPRLAPVKAAVLPLSRHADLSPKARDLAAELRRF-WNIEFDDAGA-IGRRYRRQDE 415

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
              P  +        + ++ +RR    + +++ +      L+
Sbjct: 416 IGTPFCVTVDFDSLEDNAVTVRRRDDMSQERIGMDAVADYLS 457


>gi|297194489|ref|ZP_06911887.1| glycyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC 25486]
 gi|197718701|gb|EDY62609.1| glycyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC 25486]
          Length = 460

 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 52/321 (16%), Positives = 107/321 (33%), Gaps = 23/321 (7%)

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPSGSLHGL 380
                T        L+P    G    F   L++  ++ P  +A+ G  +RNE +   + +
Sbjct: 145 THLGPTQDSGSVAYLRPETAQGIFTNFGQVLQTARKKPPFGIAQMGKSFRNEITPG-NFI 203

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            R R F Q +   F    +             + Y+D G  +  ++    P+        
Sbjct: 204 FRTREFEQMEMEFFVKPGEDEKWHEYWMEQRWNWYRDLGLREENMRWFEHPQ-------- 255

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDF 500
            +   +  K   D            G L G       + +Y LK A  +      +  D 
Sbjct: 256 -EKLSHYSKRTADIEYRFQFGGSEWGELEGVAN----RTDYDLK-AHSKASGTDLLYFDQ 309

Query: 501 NLPSRFNAFYVNSHSEKCHPVM---IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIV 557
           +   R+  + +   +     ++   +            G+M +     L   L+P++  V
Sbjct: 310 DAQERWTPYVIEPAAGVGRAMLAFLLDAYNEDEAPNAKGVMEKRAVLRLDPRLAPVKVAV 369

Query: 558 TTITSSA--VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEAS 615
             ++ +A     A+ +A  L+ +  +IE D     I  + R       P  +        
Sbjct: 370 LPLSRNAQLSPKAKGLAADLRKN-WNIEFDDAGA-IGRRYRRQDEIGTPFCVTVDFDTLD 427

Query: 616 ERSIGIRRFGSTTTQKVSLLD 636
           + ++ +R   +   ++VSL  
Sbjct: 428 DNAVTVRERDTMKQERVSLDQ 448


>gi|227548800|ref|ZP_03978849.1| glycyl-tRNA synthetase [Corynebacterium lipophiloflavum DSM 44291]
 gi|227079130|gb|EEI17093.1| glycyl-tRNA synthetase [Corynebacterium lipophiloflavum DSM 44291]
          Length = 460

 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 52/323 (16%), Positives = 106/323 (32%), Gaps = 31/323 (9%)

Query: 334 FALKPMNCPGHVAVFNHGLKSYR-ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
             L+P    G    F + + S R + P  +A  G  +RNE +   + + R R F Q +  
Sbjct: 157 HYLRPETAQGIFVNFKNVMTSARMKPPFGIANMGKSFRNEITPG-NFIFRTREFEQMEME 215

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEK-------IMVKLSTRPEKRVGSDALWDDAE 445
            F    +         +  +  Y D G +           +  +   KR        +  
Sbjct: 216 FFVKPGEDEQWHQYWIDNRLQWYIDLGIDPENLRLYEHPKEKLSHYSKRTVDVEYAYNFT 275

Query: 446 NIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSR 505
               G L+ + N +   + T          G    +  ++   R      I+    L   
Sbjct: 276 GSKWGELEGVANRTDYDLKTHAEAS-----GEDLSFFDQETNERWIPYC-IEPAAGLGRA 329

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAV 565
             AF ++++ E   P        G   R +          L   L+PI+  V  ++    
Sbjct: 330 MMAFLIDAYHEDEAPNAKG----GVDTRVV--------LKLDRRLAPIKVAVLPLSKKPE 377

Query: 566 --EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRR 623
               A+++A  L+ H  +++ D     I  + R       P  +        + ++ +R 
Sbjct: 378 LSGPAEDLAQTLRQH-WNVDYDTSGA-IGRRYRRQDEIGTPFCVTFDFDSLEDNAVTVRE 435

Query: 624 FGSTTTQKVSLLDAIPILTKESL 646
             +   ++V + +    L  + +
Sbjct: 436 RDTMQQERVKIDELESYLAAQLI 458


>gi|194332877|ref|YP_002014737.1| glycyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271]
 gi|194310695|gb|ACF45090.1| glycyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271]
          Length = 488

 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 51/369 (13%), Positives = 112/369 (30%), Gaps = 56/369 (15%)

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH 350
            EEI  P        +       ++ NM A+  +  ++       L+P    G    F++
Sbjct: 159 AEEIKAPDTGSSDWTEVRQFNLMFKCNMGALADSAGSV------YLRPETAQGIFVNFHN 212

Query: 351 -GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
               +  ++P  +A+ G  +RNE     + + R+  F Q +   F               
Sbjct: 213 VRESNRMKVPFGIAQIGKAFRNEIVKG-NFIFRMVEFEQMEMQYFVKPGTQKETFEAWRE 271

Query: 410 LIISIYK-DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
              + YK   G     +      +    +D  +D                 +     G+ 
Sbjct: 272 ERFNWYKERLGLTPGKLHWYKHDKLAHYADLAYDI----------------KFEFPFGIE 315

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
             EG     + ++ LK                    +   +   + +E+  P ++  +  
Sbjct: 316 EIEGIH--SRTDFDLK-------------QHQEFSGKNMEYIDQATNERYIPYVVETSA- 359

Query: 529 GSIERFIGIMI-----------ENFKGNLPLWLSPIQAIVTTITSSAV--EYAQEIANLL 575
           G+   F+ ++            E         ++P++A V  +       E A +  N L
Sbjct: 360 GADRLFLALLCDAYTEDVIDGEERVMMKFSPTIAPVKAAVLPLMKKGEMGEKASKFRNDL 419

Query: 576 KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
                 ++ D    +I  + R       P       +   + ++ +R   +   Q++ + 
Sbjct: 420 AEQ-FLVQYDDAG-SIGKRYRRQDEIGTPFCFTVDHQTLEDDTVTVRYRDTAEQQRMEMS 477

Query: 636 DAIPILTKE 644
                L  E
Sbjct: 478 KVPEFLAAE 486


>gi|254510259|ref|ZP_05122326.1| alanyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11]
 gi|221533970|gb|EEE36958.1| alanyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11]
          Length = 890

 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 65/155 (41%), Gaps = 5/155 (3%)

Query: 48  CDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYY 106
            D     +  ++E+      R+     HS  H++ EA++    +     G     D   +
Sbjct: 540 VDHGAISKGDAVELEVDHARRTAIRANHSATHLLHEALRETLGDHVAQRGSLNASDRLRF 599

Query: 107 DFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKAREL--FESKKEAYKVEILES 164
           DF   +  + DE+ ++E+++   I ++S    + ++ + AREL       E Y  E+   
Sbjct: 600 DFSHSKALTLDEMKKVEREVNAFIRQNSTVETRIMTPDDARELGAQALFGEKYGDEVRVV 659

Query: 165 IPAKENVTLYRQGE--WFDLCRGPHVRSTGQVKKF 197
              K      + GE    +LC G HVR TG +  F
Sbjct: 660 SMGKATTGKGQDGETWSIELCGGTHVRQTGDIGTF 694


>gi|300782829|ref|YP_003763120.1| histidyl-tRNA synthetase [Amycolatopsis mediterranei U32]
 gi|299792343|gb|ADJ42718.1| histidyl-tRNA synthetase [Amycolatopsis mediterranei U32]
          Length = 429

 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 53/410 (12%), Positives = 122/410 (29%), Gaps = 59/410 (14%)

Query: 268 WHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADD 326
           +      +   +  ++   + +  +   + P +    ++++          +   +    
Sbjct: 16  FLPAEMSVRTQVFGHLYDVLERRGFLRYDGPILESAEIYERKS-----GQELADKQLYTL 70

Query: 327 TIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
           T K  R  AL+P   P    +     KS    PVR     + +R E         RVR  
Sbjct: 71  TDKGGRRLALRPEMTPSVARMIAGSAKSLS-FPVRWYSHPNCHRYEAPQR----GRVREH 125

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD-------- 438
            Q +A +F +        ++I  L+  +    G    M  L       + S         
Sbjct: 126 WQINADIFGSDSANCE--IEIFELVHDMMAALGATPDMFVLRVNDRNLLTSALTDVAGVS 183

Query: 439 -----------ALWDDA-ENIMKGVLDTIKNSSQ--DRINTGVLLGEGAFYGPKFEYILK 484
                        W+      +      I  S +  +++   +  GE        E   +
Sbjct: 184 ADHLSQVFALVDRWEKYPREKLAESAGEIGLSDKQFEKLAETLDAGEALLDELPAEVRAE 243

Query: 485 DAIGR-----------DWQCGTIQVDFNLPSRFNAFYVNSHSEK---CHPVMIHRAVFGS 530
             + R                   + +   + F  F  +  + +           A   +
Sbjct: 244 SNLVRVLNSSAGSLVKYEPIIVRGLAYYTSTVFEVFDTSPENRRALFGGGRYSDLASMFT 303

Query: 531 IERFIGI--------MIE--NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHL 580
            ++  GI        +I+  +  G  P   S +  +V  +T    + A+ +A  L+   L
Sbjct: 304 PQQIPGIGFGMGDVTLIDFLDTHGLTPAPRSEVDVMVIPVTEDLADAARSVAGSLRQAGL 363

Query: 581 SIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
              T   +  +  ++          ++I G ++ +  ++ +R   +    
Sbjct: 364 RTSTPIEHRKLGKELTRADKAGAVAVVIVGQEDWAAGNVTVRSLATREQN 413


>gi|322386847|ref|ZP_08060471.1| serine--tRNA ligase [Streptococcus cristatus ATCC 51100]
 gi|321269129|gb|EFX52065.1| serine--tRNA ligase [Streptococcus cristatus ATCC 51100]
          Length = 446

 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/193 (17%), Positives = 74/193 (38%), Gaps = 16/193 (8%)

Query: 267 FWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD 325
           F+   G ++ + + ++M     K+ Y E+ TP +++      +G +  ++ + F +   +
Sbjct: 186 FYKGLGARLERAIYNFMLDEHGKEGYTEVITPYMVNHDSMFGTGQYPKFKEDTFELSDTN 245

Query: 326 DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMR 382
                   F L P         +   +   +ELP+        +R+E   +     GL+R
Sbjct: 246 --------FVLIPTAEVPLTNYYRDEILDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIR 297

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSD 438
           +  F + +   F   E+ + E  K+     +I +       +V LST             
Sbjct: 298 LHQFHKVEMVKFAKPEESYEELEKMTANAENILQKLNLPYRVVALSTGDMGFSAAKTYDL 357

Query: 439 ALWDDAENIMKGV 451
            +W  A+N  + +
Sbjct: 358 EVWIPAQNTYREI 370


>gi|254819377|ref|ZP_05224378.1| glycyl-tRNA synthetase [Mycobacterium intracellulare ATCC 13950]
          Length = 463

 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 53/342 (15%), Positives = 109/342 (31%), Gaps = 22/342 (6%)

Query: 307 QSGHWDS-YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAE 364
           + G W      NM           +     L+P    G    F + + +  ++ P  + +
Sbjct: 132 EPGQWTEPREFNMMLKTYLGPIETEEGLHYLRPETAQGIFVNFANVVTTARKKPPFGIGQ 191

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
            G  +RNE +   + + R R F Q +   F              +  +  Y + G +   
Sbjct: 192 IGKSFRNEITPG-NFIFRTREFEQMEMEFFVEPSTAKEWHQYWIDTRLQWYVELGIDPEN 250

Query: 425 VKLSTRPEKRV--GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
           ++L   P  ++   SD   D             +           L       G    + 
Sbjct: 251 LRLFEHPADKLSHYSDRTVDIEYKFGFAGNPWGELEGVANRTDFDLATHSKHSGVDLSFY 310

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
            +    R      I+    L   F AF ++++ E   P    +    ++ R         
Sbjct: 311 DQATDARYIP-YVIEPAAGLTRSFMAFLIDAYVEDEAPNAKGKMEKRTVLRL-------- 361

Query: 543 KGNLPLWLSPIQAIVTTIT--SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
                  L+P++A V  ++  +     A+++A  L+    +I+ D     I  + R    
Sbjct: 362 ----DPRLAPVKAAVLPLSRHADLSPKARDLAAELRQF-WNIDFDDAGA-IGRRYRRQDE 415

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
              P  +        + ++ +RR    T ++V++      L 
Sbjct: 416 IGTPFCVTVDFDSLEDNAVTVRRRDDMTQERVAMNTVADYLA 457


>gi|302551280|ref|ZP_07303622.1| glycyl-tRNA synthetase [Streptomyces viridochromogenes DSM 40736]
 gi|302468898|gb|EFL31991.1| glycyl-tRNA synthetase [Streptomyces viridochromogenes DSM 40736]
          Length = 460

 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 52/321 (16%), Positives = 110/321 (34%), Gaps = 23/321 (7%)

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
                T        L+P    G    F+     S R+ P  +A+ G  +RNE +   + +
Sbjct: 145 THLGPTQDSGSIAYLRPETAQGIFTNFSQVQTTSRRKPPFGIAQMGKSFRNEITPG-NFI 203

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            R R F Q +   F    +             + Y   G  +  ++    P++++ S   
Sbjct: 204 FRTREFEQMEMEFFVKPGEDEKWQEYWMEQRWNWYTGLGLREENMRWYEHPKEKL-SHYS 262

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY---GPKFEYILKDAIGRDWQCGTIQ 497
              A+   +      +    + +        GA     G    Y  ++A G  W    I+
Sbjct: 263 KRTADIEYRFQFGGSEWGELEGVANRTDYDLGAHSKASGQDLSYFDQEA-GERWTPYVIE 321

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIV 557
               +     AF ++++ E   P        G +E+   + +++        L+P++  V
Sbjct: 322 PAAGVGRSLLAFLLDAYVEDEAP-----NAKGKMEKRTVLRLDHR-------LAPVKVAV 369

Query: 558 TTIT--SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEAS 615
             ++        A+ +A  L+  + +IE D     I  + R       P  +        
Sbjct: 370 LPLSRNPELSPKAKGLAQALR-QNWNIEFDDAGA-IGRRYRRQDEIGTPFCVTVDFDTLE 427

Query: 616 ERSIGIRRFGSTTTQKVSLLD 636
           + ++ +R   +   +++SL  
Sbjct: 428 DNAVTVRERDTMKQERISLDQ 448


>gi|325688711|gb|EGD30720.1| serine--tRNA ligase [Streptococcus sanguinis SK115]
          Length = 425

 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 73/193 (37%), Gaps = 16/193 (8%)

Query: 267 FWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD 325
           F+   G ++ + + ++M     K+ Y E+ TP +++      +G +  ++ + F +   +
Sbjct: 165 FYKGLGARLERAIYNFMLDEHGKEGYTEVITPYMVNHDSMFGTGQYPKFKEDTFELSDTN 224

Query: 326 DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMR 382
                   F L P         +   +   +ELP+        +R+E   +     GL+R
Sbjct: 225 --------FVLIPTAEVPLTNYYRDEILDSKELPIYFTAMSPSFRSEAGSAGRDTRGLIR 276

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSD 438
           +  F + +   F   E+ + E  K+     +I +       +V L T             
Sbjct: 277 LHQFHKVEMVKFAKPEESYEELEKMTANAENILQKLNLPYRVVALCTGDMGFSAAKTYDL 336

Query: 439 ALWDDAENIMKGV 451
            +W  A+N  + +
Sbjct: 337 EVWIPAQNTYREI 349


>gi|322517430|ref|ZP_08070303.1| serine--tRNA ligase [Streptococcus vestibularis ATCC 49124]
 gi|322123912|gb|EFX95471.1| serine--tRNA ligase [Streptococcus vestibularis ATCC 49124]
          Length = 446

 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/222 (17%), Positives = 83/222 (37%), Gaps = 20/222 (9%)

Query: 242 EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINT 296
           E + H  L  ++ +          GS  +F+   G K+ + + ++M     K+ Y E+ T
Sbjct: 157 EIKPHWDLGEDLGILDWERGAKVTGSRFLFYKGLGAKLERAIYNFMLDEHAKEGYTEMIT 216

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +++      +G +  ++ + F +        D   + L P         +   +   +
Sbjct: 217 PYMVNHDSMFGTGQYPKFKEDTFEL--------DGTDYVLIPTAEVPLTNYYRGEILDGK 268

Query: 357 ELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           ELP+        +R+E   +     GL+R+  F + +   F   E  ++E  K+     +
Sbjct: 269 ELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFSKPESSYDELEKMVVNAEN 328

Query: 414 IYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
           I +       ++ L T              +W  A+N  + +
Sbjct: 329 ILQKLNLPYRVITLCTGDMGFSAAKTYDLEVWIPAQNTYREI 370


>gi|322391061|ref|ZP_08064565.1| serine--tRNA ligase [Streptococcus parasanguinis ATCC 903]
 gi|321142291|gb|EFX37765.1| serine--tRNA ligase [Streptococcus parasanguinis ATCC 903]
          Length = 446

 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 36/222 (16%), Positives = 86/222 (38%), Gaps = 20/222 (9%)

Query: 242 EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINT 296
           E + H  L  ++D+          G+  +F+   G ++ + + ++M  +  K+ Y E+  
Sbjct: 157 EPKAHWDLGEDLDILDWERGAKVTGARFLFYKGLGARLERAIYNFMLEEHGKEGYTEVIP 216

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +++      +G +  ++ + F +   +        + L P         +   +   +
Sbjct: 217 PYMVNHDSMFGTGQYPKFKEDTFELSDTN--------YVLIPTAEVPLTNYYRDEILDGK 268

Query: 357 ELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           +LP+        +R+E   +     GL+R+  F + +   F   E+ ++E  K+     +
Sbjct: 269 DLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESYDELEKMVVNAEN 328

Query: 414 IYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
           I +       +V LST              +W  A+N  + +
Sbjct: 329 ILQKLNLPYRVVALSTGDMGFSAAKTYDLEVWIPAQNTYREI 370


>gi|307708238|ref|ZP_07644705.1| seryl-tRNA synthetase [Streptococcus mitis NCTC 12261]
 gi|307615684|gb|EFN94890.1| seryl-tRNA synthetase [Streptococcus mitis NCTC 12261]
          Length = 424

 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/193 (16%), Positives = 75/193 (38%), Gaps = 16/193 (8%)

Query: 267 FWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD 325
           F+   G ++ + + ++M     K+ Y E+ TP +++      +G +  ++ + F +  ++
Sbjct: 165 FYKGLGARLERAIYNFMLDEHGKEGYTEVITPYMVNHDSMFGTGQYPKFKEDTFELSDSN 224

Query: 326 DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMR 382
                   + L P         +   +   ++LP+        +R+E   +     GL+R
Sbjct: 225 --------YVLIPTAEVPLTNYYRDEILDGKDLPIYFTAMSPSFRSEAGSAGRDTRGLIR 276

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSD 438
           +  F + +   F   E+ + E  K+     +I +       +V LST             
Sbjct: 277 LHQFHKVEMVKFAKPEESYEELEKMTANAENILQKLNLPYRVVALSTGDMGFSAAKTYDL 336

Query: 439 ALWDDAENIMKGV 451
            +W  A+N  + +
Sbjct: 337 EVWIPAQNTYREI 349


>gi|56460839|ref|YP_156120.1| alanyl-tRNA synthetase [Idiomarina loihiensis L2TR]
 gi|81599943|sp|Q5QUV7|SYA_IDILO RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|56179849|gb|AAV82571.1| Alanyl-tRNA synthetase [Idiomarina loihiensis L2TR]
          Length = 865

 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 48/221 (21%), Positives = 93/221 (42%), Gaps = 37/221 (16%)

Query: 9   FPDGS-IKNFPVHATGSDV-------AESISRSLAKKAVAVAING---KVCDLSDP---- 53
           F DG  ++       G  V       AES  +   K  +    NG   +V D        
Sbjct: 465 FKDGKPVEQLQAGENGIVVLSETPFYAESGGQIGDKGVLVA--NGPAFEVTDTQYIGKAI 522

Query: 54  ----VREGSIEIIT-----PEDPRSLAVIR-HSCAHIMAEAVQSIWPEVQVAIGPIIE-D 102
               V + ++++        +  R   + R HS  H++  A++++  E     G ++E D
Sbjct: 523 AHHGVAKAAVKLSDSVKAEIDSERRENIKRNHSATHLLHAALRNLLGEHVTQKGSLVEAD 582

Query: 103 GFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL 162
              +DF   +P ++++LAQ+E+++   +  + P   Q ++ ++A+E         K    
Sbjct: 583 KMRFDFSHFEPVTTEQLAQLEREVNAQVRANLPLQTQLMAIDEAKEAGAMALFGEKY--- 639

Query: 163 ESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKFFKLMK 202
                 E V + R G++  +LC G HV++TG +  F    +
Sbjct: 640 -----DEQVRVVRMGDFSMELCGGTHVKATGDIGLFRITSE 675


>gi|306832797|ref|ZP_07465932.1| serine--tRNA ligase [Streptococcus bovis ATCC 700338]
 gi|304425032|gb|EFM28163.1| serine--tRNA ligase [Streptococcus bovis ATCC 700338]
          Length = 435

 Score = 72.9 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 77/199 (38%), Gaps = 16/199 (8%)

Query: 261 DGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMF 319
            GS  +F+   G ++ + + ++M     K+ Y E+  P +++      +G +  ++ + F
Sbjct: 169 TGSRFLFYKGLGARLERAIYNFMLDEHAKEGYTEVIPPYMVNHDSMFGTGQYPKFKEDTF 228

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS--- 376
            +  +D        + L P         +   +   +ELPV        +R+E   +   
Sbjct: 229 ELADSD--------YVLIPTAEVPLTNYYRGEILDGKELPVYFTAMSPSFRSEAGSAGRD 280

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR-- 434
             GL+R+  F + +   F   E  ++E  K+     +I +  G    ++ L T       
Sbjct: 281 TRGLIRLHQFHKVEMVKFSKPETSYDELEKMVANAENILQKLGLPYRVITLCTGDMGFSA 340

Query: 435 --VGSDALWDDAENIMKGV 451
                  +W  A+N  + +
Sbjct: 341 AKTYDLEVWIPAQNTYREI 359


>gi|227543636|ref|ZP_03973685.1| histidyl-tRNA synthetase [Lactobacillus reuteri CF48-3A]
 gi|300908692|ref|ZP_07126155.1| histidine--tRNA ligase [Lactobacillus reuteri SD2112]
 gi|227186380|gb|EEI66451.1| histidyl-tRNA synthetase [Lactobacillus reuteri CF48-3A]
 gi|300894099|gb|EFK87457.1| histidine--tRNA ligase [Lactobacillus reuteri SD2112]
          Length = 425

 Score = 72.9 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 65/420 (15%), Positives = 133/420 (31%), Gaps = 63/420 (15%)

Query: 269 HRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
                 I++ +    R       Y  I TP       +          +++   +  D  
Sbjct: 13  LPGTTSIWEKVEQNAREVFNQFGYRGIRTPMF---EDYHVFSRNVGDTSDIVEKEMYDFH 69

Query: 328 IKDLRTFALKPMNCPGHVAVF--NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRG 385
            K  R  AL+P    G V  +  N         P ++   G ++R E   S     R R 
Sbjct: 70  DKGDRHIALRPEGTAGVVRAYVENKLYGPEYPKPYKVYYMGPMFRYERPQS----GRQRE 125

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
           F Q    V     +     +++ ++ ++++K FG   + + ++T  +K+V  D   +   
Sbjct: 126 FHQIG--VEALNNESPQIDVEVISMAMALFKKFGVPNVKLVINTLGDKKVREDYR-EALI 182

Query: 446 NIMKGVLDTIKNSSQDRI--------------------------NTGVLLGEGAFY---- 475
           N +K   D +   SQ+R+                          +      +  F     
Sbjct: 183 NYLKPHYDELSKDSQERLYKNPLRVLDSKDEGDKKIVAEAPSILDYLDEESQAYFDEVQA 242

Query: 476 -----GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN------SHS---EKCHPV 521
                G  FE       G D+   TI    +    F   Y         +    +   P 
Sbjct: 243 LLNKLGIDFEIDTNMVRGLDYYNHTIFEIMSDSPVFGGGYTTVCAGGRYNGLISQLGGPE 302

Query: 522 MIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA--VEYAQEIANLLKSHH 579
                    +ER + ++ E      P +    Q  V   ++     E A E+ + ++   
Sbjct: 303 EGGIGFGMGVERLMLLLQEEN----PAFAPQDQLDVFFASADQQGDEMAFEVLSKIRQQG 358

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
           +  + D+    +  +I+E   +      + G +E  E +  ++   +     + + D + 
Sbjct: 359 IVADKDYSGVKVGKQIKEAFRRNAKYFAVFGAREVEEGTFQLKNAATKDATTIKISDFVA 418


>gi|55794131|gb|AAV65958.1| histidyl-tRNA synthetase [Lactobacillus hilgardii]
          Length = 428

 Score = 72.9 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 66/427 (15%), Positives = 128/427 (29%), Gaps = 59/427 (13%)

Query: 262 GSGVIFWHRKGWK--------IFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWD 312
            + V +   KG          ++Q +    R       Y  I TP       +       
Sbjct: 1   MTDVDYQRPKGTVDILPGEIEVWQKVEKIARDTFNQFGYRGIRTPIF---ENYNVFARNV 57

Query: 313 SYRANMFAVKCADDTIKDLRTFALKP--MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYR 370
              +++   +  D   K  R  AL+P          V N         P ++   G ++R
Sbjct: 58  GDTSDIVEKQMYDFDDKGGRRLALRPEGTAGTVRAYVENKLFGPEYPKPYKVYYMGPMFR 117

Query: 371 NEPSGSLHGLMRVRGFTQ--DDAHVFCTKEQMFNECLKIHNLIIS--------IYKDFGF 420
            E   S     R R FTQ   +A    + +       +                    G 
Sbjct: 118 YERPQS----GRQRQFTQIGCEALNSESPQIDVEVISEALQFFKQLGINDLKLTVNTLGD 173

Query: 421 EKIMVKLSTRPEKRVG------SDALWDDAENIMKGVLDTIKNSSQDRI-NTGVLLGEGA 473
           ++            +       SD   +        VLD+   + Q  + N   +L   +
Sbjct: 174 KETRDAYHKALIDYLKPYYDQLSDDSKERMYKNPLRVLDSKDETDQKIVANAPSILDSLS 233

Query: 474 FYGPKF---------------EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC 518
            Y  K+               E       G D+   TI    +    F   YV       
Sbjct: 234 DYSAKYFEEVKKLLDKLNIKYEIDSDMVRGLDYYTQTIFEIMSASDVFGGGYVTVCGGGR 293

Query: 519 HPVMIHR--------AVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQE 570
           +  +I +          +G     + ++++    +      P      +      E A E
Sbjct: 294 YNGLISQLGGPDEGGIGYGIGVERLLLLVQKENPDFTPKYGPD-VFFASADDEGDELAFE 352

Query: 571 IANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
           + + ++ + +S + ++++  +  +I+E   +K     + G KE  E    + +  S  TQ
Sbjct: 353 VLDKIRKNGVSADKNYQDVKVGSQIKEAIRRKTRYYAVIGKKEVEEGKFELSKVDSDQTQ 412

Query: 631 KVSLLDA 637
            VS+ + 
Sbjct: 413 TVSVKEF 419


>gi|163787141|ref|ZP_02181588.1| glycyl-tRNA synthetase [Flavobacteriales bacterium ALC-1]
 gi|159877029|gb|EDP71086.1| glycyl-tRNA synthetase [Flavobacteriales bacterium ALC-1]
          Length = 512

 Score = 72.9 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 54/354 (15%), Positives = 113/354 (31%), Gaps = 53/354 (14%)

Query: 308 SGHWDSYRA-NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEF 365
           S +W   +  N+        + +      L+P    G    F +  K+   ++P  +A+ 
Sbjct: 185 SKNWTDVKQFNLMFGTKLGASAESAMDLYLRPETAQGIFVNFLNVQKTGRMKIPFGIAQT 244

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
           G  +RNE   +   + R+R F Q +   F              +  +  +K  G  +   
Sbjct: 245 GKAFRNEIV-ARQFIFRMREFEQMEMQFFIKPGTQKEWFDYWKDTRLKWHKSLGLGEENY 303

Query: 426 KLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKD 485
           +     +    +DA  D                 +     G    EG     + ++ LK 
Sbjct: 304 RFHDHEKLAHYADAATDI----------------EFNFPFGFKELEGIH--SRTDFDLK- 344

Query: 486 AIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI----MIEN 541
               ++    +Q              +  +    P ++  ++ G    F+ +    ++E 
Sbjct: 345 -QHEEFSGKKLQYFD-----------HEDNASYTPYVLETSI-GLDRMFLAVFSNSLVEE 391

Query: 542 F--------KGNLPLWLSPIQAIV--TTITSSAVEYAQEIANLLK-SHHLSIETDFRNET 590
                       LP  L+P +A +          E A++I   LK   ++        +T
Sbjct: 392 NLEDGKTRTVLKLPAVLAPAKAAIFPLVKKDGLPEVAKQIVEDLKWDFNI---IYEEKDT 448

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  + R       P  I        + ++ IR   +   ++V + D   I+  E
Sbjct: 449 VGKRYRRQDAAGTPFCITVDHDTLKDNTVTIRHRDTMDQRRVRIEDLKTIIKAE 502


>gi|290985788|ref|XP_002675607.1| Glycyl-tRNA synthetase [Naegleria gruberi]
 gi|284089204|gb|EFC42863.1| Glycyl-tRNA synthetase [Naegleria gruberi]
          Length = 650

 Score = 72.9 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 21/98 (21%), Positives = 38/98 (38%)

Query: 546 LPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPI 605
           LP  ++P +  +  I +   +  +++   L  + +S   D  N+ I  K        IP 
Sbjct: 521 LPPAIAPYKVALLPIKADQDQIVKKLQQSLARYGISHRVDAGNQNIGKKYARADDIGIPF 580

Query: 606 IIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            I   D   +  ++ IR   S     V + D I +L  
Sbjct: 581 AITIDDNSVTAGTVTIRERDSCEQVIVPISDLITVLND 618



 Score = 44.8 bits (104), Expect = 0.051,   Method: Composition-based stats.
 Identities = 26/100 (26%), Positives = 40/100 (40%), Gaps = 4/100 (4%)

Query: 314 YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNE 372
           Y  N+        T K      L+P    G    F   L+ + +++P   A+ G  +RNE
Sbjct: 180 YPFNLMFSTPIGPTGKLK--GYLRPETAQGIFVNFKRLLEYNGKQMPFASAQIGQAFRNE 237

Query: 373 PSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
            S    GL+RVR FT  +   F   +   +  L   + I 
Sbjct: 238 ISPR-SGLLRVREFTLAEIEHFLNPDVDEHPKLDTISSIR 276


>gi|228989226|ref|ZP_04149220.1| Seryl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
 gi|228995409|ref|ZP_04155080.1| Seryl-tRNA synthetase [Bacillus mycoides Rock3-17]
 gi|229003023|ref|ZP_04160881.1| Seryl-tRNA synthetase [Bacillus mycoides Rock1-4]
 gi|228758223|gb|EEM07410.1| Seryl-tRNA synthetase [Bacillus mycoides Rock1-4]
 gi|228764335|gb|EEM13211.1| Seryl-tRNA synthetase [Bacillus mycoides Rock3-17]
 gi|228770501|gb|EEM19071.1| Seryl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
          Length = 424

 Score = 72.9 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 42/223 (18%), Positives = 84/223 (37%), Gaps = 21/223 (9%)

Query: 242 EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEIN 295
           E + H  LA ++ +          GS  +F+   G ++ + LIS+M     D   YEE+ 
Sbjct: 136 EPKPHWDLATDLGILDFERAAKVTGSRFVFYKGAGARLERALISFMLDLHTDEHGYEEVL 195

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
            P ++++     +G    +  + F +        +   + L P        +    + S 
Sbjct: 196 PPYMVNRASMTGTGQLPKFEEDAFRI--------ESEDYFLIPTAEVPVTNMHRDEILSS 247

Query: 356 RELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
            +LP+R A F S +R+E   +     GL+R   F + +   F   E  + E  K+ N   
Sbjct: 248 EQLPIRYAAFSSCFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYEELEKLTNDAE 307

Query: 413 SIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENIMKGV 451
            + +  G    ++ + T              +W  +    + +
Sbjct: 308 RVLQLLGLPYRVMSMCTGDLGFTAAKKYDIEVWIPSYGTYREI 350


>gi|269794690|ref|YP_003314145.1| glycyl-tRNA synthetase [Sanguibacter keddieii DSM 10542]
 gi|269096875|gb|ACZ21311.1| glycyl-tRNA synthetase [Sanguibacter keddieii DSM 10542]
          Length = 462

 Score = 72.9 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 61/386 (15%), Positives = 120/386 (31%), Gaps = 54/386 (13%)

Query: 275 IFQTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           + +       R  ++   +I  P    +  W +         NM           +    
Sbjct: 105 MLEEFEEKKGRVPENGLADIACPNCGTRGQWTEPR-----DFNMMLKTYLGPVEDESGLH 159

Query: 335 ALKPMNCPGHVAVFNHGL-KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
            L+P    G    F + +  S ++ P  + + G  +RNE +   + + R R F Q +   
Sbjct: 160 YLRPETAQGIFVNFANVVGASRKKPPFGIGQIGKSFRNEITPG-NFIFRTREFEQMEMEF 218

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
           F              +L  + Y D G  +  ++L   P+         +   +     +D
Sbjct: 219 FVEPGTDAEWHQYWIDLRTAWYVDLGISRDNLRLFEHPQ---------EKLSHYSTRTVD 269

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS 513
                       G L G       + ++ LK     +     +                 
Sbjct: 270 IEYRFGFTGSEWGELEGIAN----RTDFDLKTHS--EHSGKDLSYFDQ-----------G 312

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIMIE--------NFKG--------NLPLWLSPIQAIV 557
            +E+  P +I     G     +  + E        N KG         L   LSP++A V
Sbjct: 313 KNERWVPYVIE-PAAGLTRSLMAFLAEAYTEDEAPNAKGGVDTRTVLKLDPRLSPVKAAV 371

Query: 558 TTIT--SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEAS 615
             ++        A+++A  L+ H  +++ D     I  + R       P  I        
Sbjct: 372 LPLSRNEQLSPKARDLATELRKH-WNVDFDDAGA-IGRRYRRQDEIGTPFCITVDFDTLD 429

Query: 616 ERSIGIRRFGSTTTQKVSLLDAIPIL 641
           ++++ IR     + ++V+L      L
Sbjct: 430 DQAVTIRHRDDMSQERVALDQVTAYL 455


>gi|194467292|ref|ZP_03073279.1| histidyl-tRNA synthetase [Lactobacillus reuteri 100-23]
 gi|194454328|gb|EDX43225.1| histidyl-tRNA synthetase [Lactobacillus reuteri 100-23]
          Length = 425

 Score = 72.9 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 65/420 (15%), Positives = 133/420 (31%), Gaps = 63/420 (15%)

Query: 269 HRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
                 I++ +    R       Y  I TP       +          +++   +  D  
Sbjct: 13  LPGTTSIWEKVEQNAREVFNQFGYRGIRTPMF---EDYHVFSRNVGDTSDIVEKEMYDFH 69

Query: 328 IKDLRTFALKPMNCPGHVAVF--NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRG 385
            K  R  AL+P    G V  +  N         P ++   G ++R E   S     R R 
Sbjct: 70  DKGDRHIALRPEGTAGVVRAYVENKLYGPEYPKPYKVYYMGPMFRYERPQS----GRQRE 125

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
           F Q    V     +     +++ ++ ++++K FG   + + ++T  +K+V  D   +   
Sbjct: 126 FHQIG--VEALNNESPQIDVEVISMAMALFKKFGVPNVKLVINTLGDKKVREDYR-EALI 182

Query: 446 NIMKGVLDTIKNSSQDRI--------------------------NTGVLLGEGAFY---- 475
           N +K   D +   SQ+R+                          +      +  F     
Sbjct: 183 NYLKPHYDELSKDSQERLYKNPLRVLDSKDEGDKKIVAEAPSILDYLDEESQAYFDEVQA 242

Query: 476 -----GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN------SHS---EKCHPV 521
                G  FE       G D+   TI    +    F   Y         +    +   P 
Sbjct: 243 LLNKLGIDFEIDTNMVRGLDYYNHTIFEIMSDSPVFGGGYTTVCAGGRYNGLISQLGGPE 302

Query: 522 MIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA--VEYAQEIANLLKSHH 579
                    +ER + ++ E      P +    Q  V   ++     E A E+ + ++   
Sbjct: 303 EGGIGFGMGVERLMLLLQEEN----PAFAPQDQLDVFFASADQQGDEMAFEVLSKVREQG 358

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
           +  + D+    +  +I+E   +      + G +E  E +  ++   +     + + D + 
Sbjct: 359 IVADKDYSGVKVGKQIKEAFRRNAKYFAVFGAREVEEGTFQLKNAATKDATTIKVSDFVA 418


>gi|260893293|ref|YP_003239390.1| alanyl-tRNA synthetase [Ammonifex degensii KC4]
 gi|260865434|gb|ACX52540.1| alanyl-tRNA synthetase [Ammonifex degensii KC4]
          Length = 874

 Score = 72.9 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/143 (24%), Positives = 66/143 (46%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFS 115
             +E     + R      H+  H++ +A++ I  P V+ A   +  D   +DFD  Q  +
Sbjct: 539 DEVEAAVDAERRRRTARNHTATHLLHQALKEILGPHVKQAGSLVAPDRLRFDFDHYQALT 598

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            +E+ ++EK++ EI+    P +    S E+A+ +        K          E V + +
Sbjct: 599 PEEIKRVEKRVNEIVLAALPVVTFTTSLEEAQAMGAVALFGEKY--------GETVRVVK 650

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G++  +LC G H+R+T +V  F
Sbjct: 651 IGDYSIELCAGTHLRNTAEVGVF 673


>gi|313204242|ref|YP_004042899.1| glycyL-tRNA synthetase [Paludibacter propionicigenes WB4]
 gi|312443558|gb|ADQ79914.1| glycyl-tRNA synthetase [Paludibacter propionicigenes WB4]
          Length = 515

 Score = 72.9 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 60/339 (17%), Positives = 111/339 (32%), Gaps = 54/339 (15%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T +      L+P    G    F +  K+   ++P  +A+ G  +RNE  
Sbjct: 195 FNLMFSTEMGSTAEGAMKIYLRPETAQGIFVNFLNVQKTGRMKIPFGIAQIGKAFRNEIV 254

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
            +   + R+R F Q +   F     E  + E  K   L        G +K       +  
Sbjct: 255 -ARQFIFRMREFEQMEMQFFVRPGEEMKWFEHWKAFRLKWHKALGLGDQKYRFHDHDKLA 313

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
                    + A +I            +  +  G    EG      F+            
Sbjct: 314 HYA------NAATDI------------EFEMPFGFKEVEGIHSRTDFD------------ 343

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNL------ 546
              +        +   ++    ++   P +I  ++ G    F+ IM  ++K         
Sbjct: 344 ---LSSHEKFSGKNIKYFDPEINQSYVPYVIETSI-GVDRTFLSIMAASYKEETLEGGDS 399

Query: 547 ------PLWLSPIQAIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
                 P  L+P++A V  +       E A+EI N LK        D ++ +I  + R  
Sbjct: 400 RVVLTLPPVLAPVKACVMPLVKKDGLPEIAREIINDLK-FDFKCAYDEKD-SIGKRYRRQ 457

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
                P  I    +   ++S+ IR   S   ++V++ D 
Sbjct: 458 DAVGTPFCITVDHQTPEDKSVTIRHRDSMLQERVAIADL 496


>gi|302560754|ref|ZP_07313096.1| glycyl-tRNA synthetase [Streptomyces griseoflavus Tu4000]
 gi|302478372|gb|EFL41465.1| glycyl-tRNA synthetase [Streptomyces griseoflavus Tu4000]
          Length = 460

 Score = 72.9 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 51/334 (15%), Positives = 105/334 (31%), Gaps = 49/334 (14%)

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
                T        L+P    G    F      S ++ P  +A+ G  +RNE +   + +
Sbjct: 145 THLGPTQDSGSVAYLRPETAQGIFTNFAQVQTASRKKPPFGIAQMGKSFRNEITPG-NFI 203

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            R R F Q +   F    +             + Y   G  +  ++    P++++     
Sbjct: 204 FRTREFEQMEMEFFVKPGEDEQWQEYWMEQRWNWYTGLGLREENMRWYEHPKEKL----- 258

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDF 500
                        +  +     I      G G+ +G      L+    R           
Sbjct: 259 -------------SHYSKRTADIEYRFQFG-GSEWG-----ELEGVANRTDYDLGAHSKA 299

Query: 501 NLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW----------- 549
               +  A++     E+  P +I     G     +  +++ +  +               
Sbjct: 300 --SGQDLAYFDQEAGERWTPYVIE-PAAGVGRAMLAFLLDAYVEDEAPNAKGKMEKRTVL 356

Query: 550 -----LSPIQAIVTTITSSAV--EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
                L+P++A V  ++ +A     A+ +A  L++H  +IE D     I  + R      
Sbjct: 357 RLDHRLAPVKAAVLPLSRNAELSPKAKGLAQALRTH-WNIEFDDAGA-IGRRYRRQDEIG 414

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
            P  +        + ++ +R   S   ++VSL  
Sbjct: 415 TPYCVTVDFDTLDDNAVTVRERDSMKQERVSLDQ 448


>gi|327462380|gb|EGF08705.1| serine--tRNA ligase [Streptococcus sanguinis SK1057]
          Length = 425

 Score = 72.9 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 73/193 (37%), Gaps = 16/193 (8%)

Query: 267 FWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD 325
           F+   G ++ + + ++M     K+ Y E+ TP +++      +G +  ++ + F +   +
Sbjct: 165 FYKGLGARLERAIYNFMLDEHGKEGYTEVITPYMVNHDSMFGTGQYPKFKEDTFELSDTN 224

Query: 326 DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMR 382
                   F L P         +   +   +ELP+        +R+E   +     GL+R
Sbjct: 225 --------FVLIPTAEVPLTNYYRDEILDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIR 276

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSD 438
           +  F + +   F   E+ + E  K+     +I +       +V L T             
Sbjct: 277 LHQFHKVEMVKFAKPEESYQELEKMTANAENILQKLNLPYRVVALCTGDMGFSAAKTYDL 336

Query: 439 ALWDDAENIMKGV 451
            +W  A+N  + +
Sbjct: 337 EVWIPAQNTYREI 349


>gi|203287820|ref|YP_002222835.1| glycyl-tRNA synthetase [Borrelia recurrentis A1]
 gi|201085040|gb|ACH94614.1| glycyl-tRNA synthetase [Borrelia recurrentis A1]
          Length = 445

 Score = 72.9 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 62/437 (14%), Positives = 126/437 (28%), Gaps = 88/437 (20%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKDDYEEIN---TPQVLDQHLWQQSGHWDSY----- 314
           SGV  +   G +I + +     + +   +E +    +  ++   +W+ SGH DS+     
Sbjct: 31  SGVWDYGPLGVEIKKNIQEEWWKSMVYFHENVVGLDSAILMRPEVWKASGHVDSFLELLV 90

Query: 315 ---------------------------------RANMFAVKCADDTIKDLRTFALKPMNC 341
                                              N+                 L+P   
Sbjct: 91  DCKNCKNRFRTDFIDLSKGCPNCGSIGTFTTPRSFNLMFKTNIGAVEDSSSEIYLRPETA 150

Query: 342 PGHVAVFNHGLKSYR-ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQ 399
            G    F + L + R ++P  +A+ G  +RNE   + + + RV  F Q +   F    + 
Sbjct: 151 QGIFVNFRNVLDTTRLKVPFGIAQVGKAFRNEII-AKNFIFRVCEFEQMEMQFFVHPSQM 209

Query: 400 MFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSS 459
               C      +    +  G +   ++           D L   A    K  +D      
Sbjct: 210 DDWYCYWREKRMNFFIETLGIKADNLRFQKH-----NDDELAHYA----KAAVDI----- 255

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
           +     G    EG      ++                   F   S+   ++     +K  
Sbjct: 256 EYNFPFGFQEIEGIHNRGNYDLN-------------QHAKFCGKSKLFEYHDLITGDKYI 302

Query: 520 PVMIHRAVFGSIERFIGIMIENFK------GNLPLWL------SPIQAIVTTI--TSSAV 565
           P +I     G     +  + + +       G+  + L      +P +  +  +       
Sbjct: 303 PYVIE-TSLGLTRSVLMTLCDAYACEELEGGDKRIVLHLHPKIAPYKVAILPLVKKDGLP 361

Query: 566 EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
           E A+++                N TI  + R       P  +         R+I +R   
Sbjct: 362 ELARKVFMQFSDDFYM--FYDENGTIGKRYRRQDEIGTPYCVTIDYDTIENRTITLRDRD 419

Query: 626 STTTQKVSLLDAIPILT 642
           + T  ++S+ D    + 
Sbjct: 420 TMTQTRISIDDLYSYVK 436


>gi|320095946|ref|ZP_08027565.1| glycyl-tRNA synthetase beta subunit [Actinomyces sp. oral taxon 178
           str. F0338]
 gi|319977117|gb|EFW08841.1| glycyl-tRNA synthetase beta subunit [Actinomyces sp. oral taxon 178
           str. F0338]
          Length = 509

 Score = 72.9 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 55/324 (16%), Positives = 103/324 (31%), Gaps = 39/324 (12%)

Query: 334 FALKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
             L+P    G    F +    + ++ P  + + G  +RNE +   + + R R F Q +  
Sbjct: 207 HYLRPETAQGIFINFANVMTAARKKPPFGIGQIGKSFRNEITPG-NFIFRTREFEQMELE 265

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
            FC             +   + Y   G +   ++    P+         +   +  K  +
Sbjct: 266 FFCEPGTDEEWHQYWIDYRKAWYVGLGIDPENLREYEHPK---------EKLSHYSKRTV 316

Query: 453 DTIKNSSQDRINTGVLLGEG--AFY---------GPKFEYILKDAIGRDWQCGTIQVDFN 501
           D            G L G      Y         G K +Y    A    W    I+    
Sbjct: 317 DLEYRFGFAGGEWGELEGIANRTDYDLTVHSQASGAKLDY-FDPASKERWTPYVIEPSAG 375

Query: 502 LPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT 561
           L     AF + ++ E   P        G  +R +          L   L+P++A V  ++
Sbjct: 376 LTRSLMAFLIEAYHEDEAPNAKG----GVDKRVV--------LKLDPRLAPVKAAVLPLS 423

Query: 562 --SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSI 619
                   A E+A+ L+    +++ D     +  + R       P  I        + ++
Sbjct: 424 RKPELTGPASELADGLRGL-WNVDYDDAGA-VGRRYRRQDEIGTPFCITYDFDSVEDHAV 481

Query: 620 GIRRFGSTTTQKVSLLDAIPILTK 643
            +R   S    ++ L    P L +
Sbjct: 482 TVRERDSMEQVRIPLDQVKPYLVE 505


>gi|203284284|ref|YP_002222024.1| glycyl-tRNA synthetase [Borrelia duttonii Ly]
 gi|201083727|gb|ACH93318.1| glycyl-tRNA synthetase [Borrelia duttonii Ly]
          Length = 445

 Score = 72.9 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 62/437 (14%), Positives = 126/437 (28%), Gaps = 88/437 (20%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKDDYEEIN---TPQVLDQHLWQQSGHWDSY----- 314
           SGV  +   G +I + +     + +   +E +    +  ++   +W+ SGH DS+     
Sbjct: 31  SGVWDYGPLGVEIKKNIQEEWWKSMVYFHENVVGLDSAILMRPEVWKASGHVDSFLELLV 90

Query: 315 ---------------------------------RANMFAVKCADDTIKDLRTFALKPMNC 341
                                              N+                 L+P   
Sbjct: 91  DCRNCKNRFRTDFIDLSKGCPNCGSIGTFTTPRSFNLMFKTNIGAVEDSSSEIYLRPETA 150

Query: 342 PGHVAVFNHGLKSYR-ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQ 399
            G    F + L + R ++P  +A+ G  +RNE   + + + RV  F Q +   F    + 
Sbjct: 151 QGIFVNFRNVLDTTRLKVPFGIAQVGKAFRNEII-AKNFIFRVCEFEQMEMQFFVHPSQM 209

Query: 400 MFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSS 459
               C      +    +  G +   ++           D L   A    K  +D      
Sbjct: 210 DDWYCYWREKRMNFFIETLGIKADNLRFQKH-----NDDELAHYA----KAAVDI----- 255

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
           +     G    EG      ++                   F   S+   ++     +K  
Sbjct: 256 EYNFPFGFQEIEGIHNRGNYDLN-------------QHAKFCGKSKLFEYHDLITGDKYI 302

Query: 520 PVMIHRAVFGSIERFIGIMIENFK------GNLPLWL------SPIQAIVTTI--TSSAV 565
           P +I     G     +  + + +       G+  + L      +P +  +  +       
Sbjct: 303 PYVIE-TSLGLTRSVLMTLCDAYACEELEGGDKRIVLHLHPKIAPYKVAILPLVKKDGLP 361

Query: 566 EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
           E A+++                N TI  + R       P  +         R+I +R   
Sbjct: 362 ELARKVFMQFSDDFYM--FYDENGTIGKRYRRQDEIGTPYCVTIDYDTIENRTITLRDRD 419

Query: 626 STTTQKVSLLDAIPILT 642
           + T  ++S+ D    + 
Sbjct: 420 TMTQTRISIDDLYSYVK 436


>gi|46206189|ref|ZP_00047605.2| COG0423: Glycyl-tRNA synthetase (class II) [Magnetospirillum
           magnetotacticum MS-1]
          Length = 322

 Score = 72.9 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 52/352 (14%), Positives = 108/352 (30%), Gaps = 49/352 (13%)

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGS 376
           M           +     L+P    G    F +    S ++ P  + + G  +RNE +  
Sbjct: 1   MMLKTYLGPVEDESGLHYLRPETAQGIFVNFANVMGASRKKPPFGIGQIGKSFRNEITPG 60

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
            + + R R F Q +   F              +     Y D G ++  ++L   P+    
Sbjct: 61  -NFIFRTREFEQMEMEFFVEPGTDAEWHQYWIDTRTDWYVDLGIQRDNLRLYEHPQ---- 115

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
                +   +     +D            G L G       + ++ LK     +     +
Sbjct: 116 -----EKLSHYSTRTVDIEYRFGFSGSEWGELEGIAN----RTDFDLKTHA--EHSGKDL 164

Query: 497 QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW------- 549
                             +E+  P +I     G     +  ++E +  +           
Sbjct: 165 SYFDQTK-----------NERWVPYVIE-PAAGLTRSLMAFLVEAYTEDEAPNAKGGVDT 212

Query: 550 ---------LSPIQAIVTTIT--SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
                    L+P++A V  ++        A+++A  L+ +  +++ D     I  + R  
Sbjct: 213 RTVLRLDHRLAPVKAAVLPLSRNEQLSPKAKDLATELRKY-WNVDFDDAGA-IGRRYRRQ 270

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDC 650
                P  I        ++++ IR   S + ++V+L      L      PD 
Sbjct: 271 DEIGTPFCITVDFDTLDDQAVTIRHRDSMSQERVALDKVTEYLAGHCSAPDA 322


>gi|332359167|gb|EGJ36988.1| serine--tRNA ligase [Streptococcus sanguinis SK49]
          Length = 425

 Score = 72.9 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 34/193 (17%), Positives = 73/193 (37%), Gaps = 16/193 (8%)

Query: 267 FWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD 325
           F+   G ++ + + ++M     K+ Y E+ TP +++      +G +  ++ + F +   +
Sbjct: 165 FYKGLGARLERAIYNFMLDEHGKEGYTEVITPYIVNHDSMFGTGQYPKFKEDTFELSDTN 224

Query: 326 DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMR 382
                   F L P         +   +   +ELP+        +R+E   +     GL+R
Sbjct: 225 --------FVLIPTAEVPLTNYYRDEILDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIR 276

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSD 438
           +  F + +   F   E+ + E  K+     +I K       +V L T             
Sbjct: 277 LHQFHKVEMVKFAKPEESYQELEKMTANAENILKKLNLPYRVVALCTGDMGFSAAKTYDL 336

Query: 439 ALWDDAENIMKGV 451
            +W  A+N  + +
Sbjct: 337 EVWIPAQNTYREI 349


>gi|326802688|ref|YP_004320506.1| serine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
 gi|326651068|gb|AEA01251.1| serine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
          Length = 432

 Score = 72.9 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 72/189 (38%), Gaps = 14/189 (7%)

Query: 271 KGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
            G ++ + L ++M  +  K+ Y E+ TP +++      +G +  +  +++ +        
Sbjct: 169 LGARLERALYNFMLDQHQKEGYMEMITPFLVNDQAMYGTGQFPKFTEDVYQIT------N 222

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGF 386
           + +   L P         F   +    +LP+R+      +R+E   +     GL+R+  F
Sbjct: 223 EGQDLTLIPTAEVPLTNYFAKEILKEEDLPIRVTALSPCFRSEAGSAGRDTRGLIRMHQF 282

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWD 442
            + +     T +Q F+E   +     +I    G     + L T              +W 
Sbjct: 283 QKVEMVKVATPDQSFDELEAMTKNAENILDLLGLPYRRIILCTGDMGFSAAKTYDIEVWM 342

Query: 443 DAENIMKGV 451
            A+N  + +
Sbjct: 343 PAQNTYREI 351


>gi|315612585|ref|ZP_07887498.1| serine--tRNA ligase [Streptococcus sanguinis ATCC 49296]
 gi|315315566|gb|EFU63605.1| serine--tRNA ligase [Streptococcus sanguinis ATCC 49296]
          Length = 424

 Score = 72.9 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 76/193 (39%), Gaps = 16/193 (8%)

Query: 267 FWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD 325
           F+   G ++ + + ++M     K+ Y E+ TP +++      +G++  ++ + F +K  +
Sbjct: 165 FYKGLGARLERAIYNFMLDEHGKEGYTEVITPYMVNHDSMFGTGNYPKFKDDTFELKATN 224

Query: 326 DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMR 382
                   + L P         +   +   ++LP+        +R+E   +     GL+R
Sbjct: 225 --------YVLIPTAEVPLTNYYRDEILDGKDLPIYFTAMSPSFRSEAGSAGRDTRGLIR 276

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSD 438
           +  F + +   F   E+ + E  K+     +I +       +V LST             
Sbjct: 277 LHQFHKVEMVKFAKPEESYEELEKMTANAENILQKLNLPYRVVALSTGDMGFSAAKTYDL 336

Query: 439 ALWDDAENIMKGV 451
            +W  A+N  + +
Sbjct: 337 EVWIPAQNTYREI 349


>gi|125718717|ref|YP_001035850.1| seryl-tRNA synthetase [Streptococcus sanguinis SK36]
 gi|166223300|sp|A3CQ45|SYS_STRSV RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|125498634|gb|ABN45300.1| Seryl-tRNA synthetase, putative [Streptococcus sanguinis SK36]
          Length = 425

 Score = 72.9 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/243 (16%), Positives = 91/243 (37%), Gaps = 21/243 (8%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIF 276
           G   N   E+ ++    +   E + H  L  ++D+          G+  +F+   G ++ 
Sbjct: 115 GADENENVEVRRWGTPHQFDFEAKAHWDLGEDLDILDWERGAKVTGARFLFYKGLGARLE 174

Query: 277 QTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFA 335
           + + ++M     K+ Y E+ TP +++      +G +  ++ + F +   +        F 
Sbjct: 175 RAIYNFMLDEHGKEGYTEVITPYMVNHDSMFGTGQYPKFKEDTFELSDTN--------FV 226

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAH 392
           L P         +   +   +ELP+        +R+E   +     GL+R+  F + +  
Sbjct: 227 LIPTAEVPLTNYYRDEILDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMV 286

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIM 448
            F   E+ + E  K+     +I +       +V L T              +W  A+N  
Sbjct: 287 KFAKPEESYEELEKMTANAENILQKLNLPYRVVALCTGDMGFSAAKTYDLEVWIPAQNTY 346

Query: 449 KGV 451
           + +
Sbjct: 347 REI 349


>gi|125973827|ref|YP_001037737.1| glycyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|256004278|ref|ZP_05429260.1| glycyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|281417986|ref|ZP_06249006.1| glycyl-tRNA synthetase [Clostridium thermocellum JW20]
 gi|254781878|sp|A3DF15|SYG_CLOTH RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|125714052|gb|ABN52544.1| glycyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|255991712|gb|EEU01812.1| glycyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|281409388|gb|EFB39646.1| glycyl-tRNA synthetase [Clostridium thermocellum JW20]
 gi|316939978|gb|ADU74012.1| glycyl-tRNA synthetase [Clostridium thermocellum DSM 1313]
          Length = 462

 Score = 72.9 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 43/342 (12%), Positives = 107/342 (31%), Gaps = 50/342 (14%)

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEP 373
           + N+        T        L+P    G    F +  ++  +++P  + + G  +RNE 
Sbjct: 150 KFNLMFKTFQGVTEDSKSEIYLRPETAQGIFVNFKNVQRTTRKKIPFGIGQIGKSFRNEI 209

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP 431
           +   + + R R F Q +   FC    +  + E  K       +  +   E + ++  ++ 
Sbjct: 210 TPG-NFIFRTREFEQMELEFFCEPGTDLEWFEYWKNFCFNWLLSLNIKKENLRMRDHSKE 268

Query: 432 EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDW 491
           E    S+A  D         L          I              + ++ L+       
Sbjct: 269 ELSHYSNATTDI------EYLFPFGWGELWGI------------ADRTDFDLR------- 303

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK-------- 543
                Q   +     +  Y + ++ + +         G+    +  + + +         
Sbjct: 304 -----QHAEHSKE--DLSYFDPNTNRKYIPYCIEPSLGADRVALVFLCDAYDEEEVEEGD 356

Query: 544 ----GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
                     ++P++  V  ++    + A +I  +L     + E D    +I  + R   
Sbjct: 357 IRVVLRFHPAIAPVKIAVLPLSKKLGDEAYKIYEMLIKK-YNCEYDETG-SIGKRYRRQD 414

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
               P  +       ++R + +R   S    ++ + + +   
Sbjct: 415 EIGTPYCVTFDFDSLNDRCVTVRDRDSMQQVRIKIDELLSYF 456


>gi|312888874|ref|ZP_07748436.1| glycyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603]
 gi|311298615|gb|EFQ75722.1| glycyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603]
          Length = 493

 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 64/347 (18%), Positives = 117/347 (33%), Gaps = 52/347 (14%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+          +      L+P    G    F +  KS   ++P  +A+ G  +RNE  
Sbjct: 167 FNLMFSTQFGAMAEGSEEIYLRPETAQGIFVNFLNVQKSGRMKIPFGIAQIGKAFRNEVI 226

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
            +   ++R+R F Q +   F     E  + E  K   L    +   G +    +     +
Sbjct: 227 -ARQFIIRMREFEQMEMQFFIRPGTEMEWYEYWKAARL--KWHVALGTDPAKYQYHDHAK 283

Query: 433 KRVGSDALWDDAENIMKGVLD----------------TIKNSSQDRINTGVLLGEGAFYG 476
               ++A  D       G  +                   N      +  V    G  YG
Sbjct: 284 LAHYANAAVDIEYEFPFGFKEVEGIHSRTDFDLSQHQKFSNKKMQYFDPEVDPETGKPYG 343

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
               Y+++ +IG             L   F    +N++ E+            + ER   
Sbjct: 344 NYIPYVIETSIG-------------LDRMFLLTMINAYEEED---------LSTEERQDS 381

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAV--EYAQEIANLLKSHHLSIETDFRNETINYK 594
             +      LP  L+P++A +  +T      E A+EI + LK    +++ + ++  I  +
Sbjct: 382 RTV----LRLPAVLAPVKAAIFPLTKKDGLPEKAREIMDKLK-LEYNVQYEEKDA-IGKR 435

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            R       PI I    +   + ++ IR   S   ++V   D   IL
Sbjct: 436 YRRQDAIGTPICITVDHQSLEDNTVTIRHRDSMAQERVPADDLTRIL 482


>gi|294790521|ref|ZP_06755679.1| glycine--tRNA ligase [Scardovia inopinata F0304]
 gi|294458418|gb|EFG26771.1| glycine--tRNA ligase [Scardovia inopinata F0304]
          Length = 494

 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 50/342 (14%), Positives = 109/342 (31%), Gaps = 50/342 (14%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPS 374
            NM           +     L+P    G    F   L  S ++ P  +A  G  +RNE +
Sbjct: 155 FNMMLRTHLGPVEDENSLHYLRPETAQGIFVDFAEVLTTSRQKPPFGIANMGKSFRNEIT 214

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              + + R R F Q +   F    +  +      +     Y D G     ++L   P+  
Sbjct: 215 PG-NFIFRTREFEQMEMEFFVKPGEDEDWHQYWIDARRQWYVDLGVNPDNLRLYEHPK-- 271

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG-EGAFYGPKFEYILKDAIGRDWQC 493
                             + + + S+  ++     G +G+ +G      L+    R    
Sbjct: 272 ------------------EKLSHYSKRTVDIEYKFGFQGSDWG-----ELEGIANRTDYD 308

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK---------- 543
            +         +  +++  +  E+  P +I     G     +  +++ +           
Sbjct: 309 LSAHSRH--SGKDLSYFDQASGERYTPYVIE-PAAGLTRSLMAFLVDAYDVDEAPNTKGG 365

Query: 544 ------GNLPLWLSPIQAIVTTITSSA--VEYAQEIANLLKSHHLSIETDFRNETINYKI 595
                   L   L+P++A V  ++        A  +A+ L+     ++ D     I  + 
Sbjct: 366 VDTRTVLRLDPRLAPVKAAVLPLSKKPQLQTIAHNLADELREDDWDVDYDEAGA-IGRRY 424

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
           R       P+ +        ++++ IR   +    +V+L   
Sbjct: 425 RRQDEIGTPLCVTVDFDTLDDQAVTIRERDTMKQDRVALDQV 466


>gi|2415553|emb|CAA04302.1| threonyl-tRNA synthetase [Campylobacter jejuni]
          Length = 87

 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/85 (37%), Positives = 50/85 (58%), Gaps = 2/85 (2%)

Query: 78  AHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFL 137
           AH+MA+A++S++PE +  +GP+IEDGFYYDF  E       L +IEKKM+E+        
Sbjct: 1   AHLMAQAIKSLYPEAKFFVGPVIEDGFYYDFRVESKIGEKNLVKIEKKMKELAEAKIEIS 60

Query: 138 KQYLSHEKARELFESKKEAYKVEIL 162
           K  ++  +A    + + +  K E L
Sbjct: 61  KYEITKSEALA--KFQNDDLKQEFL 83


>gi|325695149|gb|EGD37050.1| serine--tRNA ligase [Streptococcus sanguinis SK150]
          Length = 425

 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 73/193 (37%), Gaps = 16/193 (8%)

Query: 267 FWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD 325
           F+   G ++ + + ++M     K+ Y E+ TP +++      +G +  ++ + F +   +
Sbjct: 165 FYKGLGARLERAIYNFMLDEHGKEGYTEVITPYMVNHDSMFGTGQYPKFKEDTFELSDTN 224

Query: 326 DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMR 382
                   F L P         +   +   +ELP+        +R+E   +     GL+R
Sbjct: 225 --------FVLIPTAEVPLTNYYRDEILDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIR 276

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSD 438
           +  F + +   F   E+ + E  K+     +I +       +V L T             
Sbjct: 277 LHQFHKVEMVKFAKPEESYQELEKMTANAENILQKLNLPYRVVALCTGDMGFSAAKTYDL 336

Query: 439 ALWDDAENIMKGV 451
            +W  A+N  + +
Sbjct: 337 EVWIPAQNTYREI 349


>gi|182683380|ref|YP_001835127.1| seryl-tRNA synthetase [Streptococcus pneumoniae CGSP14]
 gi|182628714|gb|ACB89662.1| seryl-tRNA synthetase [Streptococcus pneumoniae CGSP14]
          Length = 452

 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 51/354 (14%), Positives = 115/354 (32%), Gaps = 51/354 (14%)

Query: 120 AQIEKKMQEIIARDSPF---------LKQYLSHEKARELFESKKEAYKVEILESIPA--- 167
           A +  +M+EI A+              +  +S E A+     +    K+  ++++ A   
Sbjct: 53  AAVLNEMKEIDAKRRNILIKVETLKAERNTVSAEIAQAKRNKENTDDKIAAMQNLSAEVK 112

Query: 168 --KENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAW 225
                +              P++ +        +   V    W             GT  
Sbjct: 113 ALDAELAEIDAKLTEFTTTLPNIPADSVPVGADEDDNVEVRRW-------------GTPR 159

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYM-R 284
               E   +    E+    D  +  +      +        F+   G ++ + + ++M  
Sbjct: 160 EFDFEPKAHWDLGEDLGILDWERGGKVTGARFL--------FYKGLGARLERAIYNFMLD 211

Query: 285 RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
              K+ Y E+ TP +++      +G +  ++ + F +   +        F L P      
Sbjct: 212 EHGKEGYTEVITPYIVNHDSMFGTGQYPKFKEDTFELSDTN--------FVLIPTAEVPL 263

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMF 401
              +   +   ++LP+        +R+E   +     GL+R+  F + +   F   E+ +
Sbjct: 264 TNYYRDEILDGKDLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESY 323

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
            E  K+     +I +       +V LST              +W  A+N  + +
Sbjct: 324 EELEKMTANAENILQKLNLPYRVVALSTGDMGFSAAKTYDLEVWIPAQNNYREI 377


>gi|332665395|ref|YP_004448183.1| glycyl-tRNA synthetase [Haliscomenobacter hydrossis DSM 1100]
 gi|332334209|gb|AEE51310.1| glycyl-tRNA synthetase [Haliscomenobacter hydrossis DSM 1100]
          Length = 516

 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 57/362 (15%), Positives = 114/362 (31%), Gaps = 61/362 (16%)

Query: 308 SGHWDSYRA-NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE-LPVRLAEF 365
           S +W   R  N+       +   +     L+P    G    F +  KS R+ +P  +A+ 
Sbjct: 186 SRNWTEVRQFNLMFNTQLGNIAGEEGKLYLRPETAQGIFVNFLNVQKSTRQKIPFGIAQI 245

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKI 423
           G  +RNE   +   + R+R F Q +   F     E  + +  K   +   +      EK+
Sbjct: 246 GKAFRNEIV-ARQFIFRMREFEQMEMQFFIRPGEEMKWYDYWKQTRMNWHLKIGTPAEKL 304

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
             K                         +D      Q     G    EG      F+   
Sbjct: 305 RFKDHDNLAHYAN-------------AAVDI-----QYEFPFGFKELEGIHSRTNFDL-- 344

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
             +  ++     +Q              +    + +   +     G+   F+ +M E+ K
Sbjct: 345 --SSHQELSGKKLQYF------------DPELNENYVPYVVETSVGADRMFLAMMSESLK 390

Query: 544 ----------------GNLPLWLSPIQAIVTTITSSAVEYAQ---EIANLLKSHHLSIET 584
                             L   L+P++  V  +  +  E  +   ++ N LK      + 
Sbjct: 391 EESVPDAKGEDSTRVVMKLHPALAPVKVAVLPLLKNREELVKASTDVFNKLKFS-FQCQY 449

Query: 585 DFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           D ++  I  + R       P  +    +     ++ IR   S   ++V + D I  + ++
Sbjct: 450 DEKDA-IGRRYRRQDAIGTPYCVTIDFETLENNTVTIRERDSLKQERVHI-DRIEEIVRQ 507

Query: 645 SL 646
            +
Sbjct: 508 RV 509


>gi|216263944|ref|ZP_03435938.1| glycyl-tRNA synthetase [Borrelia afzelii ACA-1]
 gi|215979988|gb|EEC20810.1| glycyl-tRNA synthetase [Borrelia afzelii ACA-1]
          Length = 445

 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 64/432 (14%), Positives = 127/432 (29%), Gaps = 70/432 (16%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKDDYEEIN---TPQVLDQHLWQQSGHWDSYRANMF 319
           SGV  +   G ++ + +     + +   +E I    +   +   +W+ SGH D +  +M 
Sbjct: 28  SGVWDYGPLGIELKENIKREWWKSMVYLHENIVGLDSAIFMRSEIWKASGHIDGFSDSMV 87

Query: 320 AVKCADDTIKDL--------------------------------------RTFALKPMNC 341
             K      +                                            L+P   
Sbjct: 88  DCKDCKSRFRADFVDLSKNCPNCKVGNNFTSPRNFNLMFKTHIGVVEDSSSEIYLRPETA 147

Query: 342 PGHVAVFNHGLKSYR-ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQ 399
            G    F + L S R ++P  +A+ G  +RNE   + + + R   F Q +   F    + 
Sbjct: 148 QGIFVNFRNVLDSSRLKIPFGIAQVGKAFRNEIV-AKNFIFRTCEFEQMEMQFFVHPKQI 206

Query: 400 MFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSS 459
               C    N +    +        ++L       +   A         K   D      
Sbjct: 207 DEWFCYWQQNRMNFFIETLKIRPDRLRLKAHNSTELAHYA---------KSAFDI----- 252

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
           +     G    EG      ++         + +      D     R+  + + + +    
Sbjct: 253 EYEFPFGFQEVEGIHNRGNYDLTQHSKFSNNSKVFEYH-DLLTKERYVPYVIETSAGLTR 311

Query: 520 PVMIHRAVFGSIERFIGIMIENFK---GNLPLWLSPIQAIVTTITSSA--VEYAQEIANL 574
            V++      S E     + +  K     L   L+P +  +  +      VE A+ I   
Sbjct: 312 SVLMTLCDAYSEEE----LSDGDKRIVLRLHPKLAPYKIAIFPLVKKVELVEVARRIYME 367

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           L      I  D    TI  + R       P  +        + ++ +R   + T +++ +
Sbjct: 368 LCD-DFHIFYDDSG-TIGKRYRRQDEIGTPYCVTVDYNTIEDETVTVRERNNMTQKRIFI 425

Query: 635 LDAIPILTKESL 646
            D    +  E L
Sbjct: 426 NDLYSYIKTEIL 437


>gi|161507947|ref|YP_001577911.1| seryl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
 gi|172048352|sp|A8YWU9|SYS_LACH4 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|160348936|gb|ABX27610.1| Seryl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
          Length = 435

 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 76/188 (40%), Gaps = 9/188 (4%)

Query: 272 GWKIFQTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G  + + + ++ +    KD Y E+  P +++    Q +G +  +  +++ +   DD  K 
Sbjct: 170 GALLERAVFNFFLDENTKDGYTEVIPPYLVNDASMQGTGQFPKFHEDVYTIVDNDDPDKP 229

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFT 387
            R   L P      V  F + +    +LP+ +      +R+E   +     GL+R+  F 
Sbjct: 230 -RDLTLIPTAEVPLVNYFRNEIIHENKLPINVTALSPAFRSEAGSAGRDTRGLIRMHEFR 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM----VKLSTRPEKRVGSDALWDD 443
           + +    C  ++ ++E  K+ +    + +  G    +       ++    R     +W  
Sbjct: 289 KVEMVKVCKPDESWDELEKLTHNAEHLLQKLGLPYHVVALSTGDASFTSARTYDLEVWMP 348

Query: 444 AENIMKGV 451
           A++  + +
Sbjct: 349 AQDKYREI 356


>gi|78185357|ref|YP_377792.1| seryl-tRNA synthetase [Synechococcus sp. CC9902]
 gi|123580767|sp|Q3AV47|SYS_SYNS9 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|78169651|gb|ABB26748.1| seryl-tRNA synthetase [Synechococcus sp. CC9902]
          Length = 425

 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/244 (15%), Positives = 84/244 (34%), Gaps = 20/244 (8%)

Query: 220 IYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED----GSGVIFWHRKGWKI 275
             G + +   E+ ++     E    +H ++A+ ++LF          S  +    +G ++
Sbjct: 117 PDGKSEDDNVEVRRWGTPRIEEGLEEHWQIAQRLNLFDTERSVRIAQSRFVTLMGQGARL 176

Query: 276 FQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
            + LI++M        Y E+  P +++      SG    +    F     D         
Sbjct: 177 ERALINFMLDLHTSKGYREVMPPVLVNTASLTGSGQLPKFAEESFRCADDD--------L 228

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDA 391
            L P       ++    +    +LP+R + +   +R E         GL+R+  F + + 
Sbjct: 229 WLTPTAEVPVTSLHRDEIIPADQLPLRYSAYSPCFRREAGSYGRDTRGLIRLHQFNKVEL 288

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP----EKRVGSDALWDDAENI 447
           + F   +Q      +I     ++ +       ++ L T       +R     +W      
Sbjct: 289 YWFVHPDQSEEAHQQITADAEAVLQALDLPYRVLDLCTGDLGFSAQRTYDLEVWLPGAGA 348

Query: 448 MKGV 451
            + +
Sbjct: 349 FREI 352


>gi|327467137|gb|EGF12647.1| serine--tRNA ligase [Streptococcus sanguinis SK330]
          Length = 425

 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 73/193 (37%), Gaps = 16/193 (8%)

Query: 267 FWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD 325
           F+   G ++ + + ++M     K+ Y E+ TP +++      +G +  ++ + F +   +
Sbjct: 165 FYKGLGARLERAIYNFMLDEHGKEGYTEVITPYMVNHDSMFGTGQYPKFKEDTFELSDTN 224

Query: 326 DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMR 382
                   F L P         +   +   +ELP+        +R+E   +     GL+R
Sbjct: 225 --------FVLIPTAEVPLTNYYRDEILDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIR 276

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSD 438
           +  F + +   F   E+ + E  K+     +I +       +V L T             
Sbjct: 277 LHQFHKVEMVKFAKPEESYQELEKMTANAENILQKLNLPYRVVALCTGDMGFSAAKTYDL 336

Query: 439 ALWDDAENIMKGV 451
            +W  A+N  + +
Sbjct: 337 EVWIPAQNTYREI 349


>gi|294496132|ref|YP_003542625.1| histidyl-tRNA synthetase [Methanohalophilus mahii DSM 5219]
 gi|292667131|gb|ADE36980.1| histidyl-tRNA synthetase [Methanohalophilus mahii DSM 5219]
          Length = 413

 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 68/413 (16%), Positives = 134/413 (32%), Gaps = 51/413 (12%)

Query: 268 WHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADD 326
           +  +  ++ + + + MR  +    Y EI TP   +  L+                +  + 
Sbjct: 12  FLPENTRLRRFVENRMRDVVSRWGYHEIITPTFENLELFTLKS------GEGVTGEIYNF 65

Query: 327 TIKDLRTFALKP-MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRG 385
           + K  R  AL+P +  P      N    + R  P++L  F + +R E         R R 
Sbjct: 66  SDKGDRELALRPELTAPVMRMYVNEMQATPR--PLKLFYFENCFRYERPQK----GRFRE 119

Query: 386 FTQD------------DAHVFCTKEQMFNE----------CLKIHNLIISIYKDFGFEKI 423
           F Q             DA V    E+M              L I   I+   +     KI
Sbjct: 120 FWQFGVETIGSSRPDADAEVIALAEEMIESVGIKGDLRVGHLGIIRHILKELEAEQQTKI 179

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKN-SSQDRINTGVLLGEGAFYGPKFE-- 480
           M  +  + +  +       +A   ++  L  + + + +D I     +        KFE  
Sbjct: 180 MRLVDKKDDTGLDDYLEQINASIELRNELFELVSITGEDAIEKARQIVGDIEELHKFEEL 239

Query: 481 YILKDAIGRDWQC---GTIQVDFNLPSRFNAFYVNSHSEKCHP-----VMIHRAVFGSIE 532
             + DA   ++         +D+     F  +  N  ++          +IH    G + 
Sbjct: 240 TQILDAYNVEYSMDFGIARGLDYYTGMVFEIYASNLGAQNQICGGGSYQLIHLFGGGDVP 299

Query: 533 RFIGIMIENFKGNLPLWLSPIQ--AIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
                +  +    +   L P Q   +V   T      A  IA  L+     +  D     
Sbjct: 300 STGFGLGFDRIMEICE-LEPEQKKEVVLVATDDTRLDAIGIARELRRKVP-VYLDIMKRN 357

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              ++   +      ++I G +E     + ++  GS    ++++ +A   + K
Sbjct: 358 FKGQLSHANNIGARYVVIVGKREMEAGKVTLKDMGSGEQHQLTVEEAREHILK 410


>gi|262283251|ref|ZP_06061018.1| seryl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
 gi|262261503|gb|EEY80202.1| seryl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
          Length = 425

 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 73/193 (37%), Gaps = 16/193 (8%)

Query: 267 FWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD 325
           F+   G ++ + + ++M     K+ Y E+ TP +++      +G +  ++ + F +   +
Sbjct: 165 FYKGLGARLERAIYNFMLDEHGKEGYTEVITPYMVNHDSMFGTGQYPKFKEDTFELSDTN 224

Query: 326 DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMR 382
                   F L P         +   +   +ELP+        +R+E   +     GL+R
Sbjct: 225 --------FVLIPTAEVPLTNYYRDEILDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIR 276

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSD 438
           +  F + +   F   E+ + E  K+     +I +       +V L T             
Sbjct: 277 LHQFHKVEMVKFAKPEESYQELEKMTANAENILQKLNLPYRVVALCTGDMGFSAAKTYDL 336

Query: 439 ALWDDAENIMKGV 451
            +W  A+N  + +
Sbjct: 337 EVWIPAQNTYREI 349


>gi|15457932|gb|AAK99176.1| Seryl-tRNA synthetase [Streptococcus pneumoniae R6]
          Length = 445

 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 51/354 (14%), Positives = 115/354 (32%), Gaps = 51/354 (14%)

Query: 120 AQIEKKMQEIIARDSPF---------LKQYLSHEKARELFESKKEAYKVEILESIPA--- 167
           A +  +M+EI A+              +  +S E A+     +    K+  ++++ A   
Sbjct: 46  AAVLNEMKEIDAKRRNILVKVETLKAERNTVSAEIAQAKRNKENTDDKIAAMQNLSAEVK 105

Query: 168 --KENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAW 225
                +              P++ +        +   V    W             GT  
Sbjct: 106 ALDAELAEIDAKLTEFTTTLPNIPADSVPVGADEDDNVEVRRW-------------GTPR 152

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYM-R 284
               E   +    E+    D  +  +      +        F+   G ++ + + ++M  
Sbjct: 153 EFDFEPKAHWDLGEDLGILDWERGGKVTGARFL--------FYKGLGARLERAIYNFMLD 204

Query: 285 RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
              K+ Y E+ TP +++      +G +  ++ + F +   +        F L P      
Sbjct: 205 EHGKEGYTEVITPYIVNHDSMFGTGQYPKFKEDTFELSDTN--------FVLIPTAEVPL 256

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMF 401
              +   +   ++LP+        +R+E   +     GL+R+  F + +   F   E+ +
Sbjct: 257 TNYYRDEILDGKDLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESY 316

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
            E  K+     +I +       +V LST              +W  A+N  + +
Sbjct: 317 EELEKMTANAENILQKLNLPYRVVALSTGDMGFSATKTYDLEVWIPAQNNYREI 370


>gi|332366431|gb|EGJ44182.1| serine--tRNA ligase [Streptococcus sanguinis SK355]
          Length = 425

 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 73/193 (37%), Gaps = 16/193 (8%)

Query: 267 FWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD 325
           F+   G ++ + + ++M     K+ Y E+ TP +++      +G +  ++ + F +   +
Sbjct: 165 FYKGLGARLERAIYNFMLDEHGKEGYTEVITPYMVNHDSMFGTGQYPKFKEDTFELSDTN 224

Query: 326 DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMR 382
                   F L P         +   +   +ELP+        +R+E   +     GL+R
Sbjct: 225 --------FVLIPTAEVPLTNYYRDEILDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIR 276

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSD 438
           +  F + +   F   E+ + E  K+     +I +       +V L T             
Sbjct: 277 LHQFHKVEMVKFAKPEESYQELEKMTANAENILQKLNLPYRVVALCTGDMGFSAAKTYDL 336

Query: 439 ALWDDAENIMKGV 451
            +W  A+N  + +
Sbjct: 337 EVWIPAQNTYREI 349


>gi|305680817|ref|ZP_07403624.1| glycine--tRNA ligase [Corynebacterium matruchotii ATCC 14266]
 gi|305659022|gb|EFM48522.1| glycine--tRNA ligase [Corynebacterium matruchotii ATCC 14266]
          Length = 459

 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 47/328 (14%), Positives = 104/328 (31%), Gaps = 51/328 (15%)

Query: 334 FALKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
             ++P    G    F +    +  + P  + + G  +RNE +   + + R R F Q +  
Sbjct: 156 HYMRPETAQGIFINFKNVQTTARMKPPFGIGQVGKAFRNEITPG-NFIFRTREFEQMEIE 214

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
            F +      +  +  +     + D G     ++    P+                    
Sbjct: 215 YFVSPSDAPEKFQEWVDACWDWFIDLGINPDNMRQFDVPK-------------------- 254

Query: 453 DTIKNSSQDRINTGVLLG-EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
           +   + S   I+     G  G+ +G   E +             I+      S F+    
Sbjct: 255 EERAHYSAGTIDFEYRFGFAGSEWG---ELMGVANRTDYDLGSHIKYSGEDLSYFDQVT- 310

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW----------------LSPIQA 555
               E+  P +I    FG     +  + + +  +                    L+P++ 
Sbjct: 311 ---GERYVPYVIE-PSFGLTRAMMAFLCDAYHEDEAPNAKGGVDKRTVLRLDRRLAPVKV 366

Query: 556 IVTTIT--SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
            V  ++   + +  A+ IA  L+    +I+ D     I  + R       P  +      
Sbjct: 367 AVLPLSKKDTLLPTAEAIAADLRKL-WNIDYDIAGA-IGRRYRRQDEIGTPFCVTVDFDS 424

Query: 614 ASERSIGIRRFGSTTTQKVSLLDAIPIL 641
             +RS+ +R   +   ++V++ +    L
Sbjct: 425 LEDRSVTVRERDTMAQERVAIDELPAYL 452


>gi|160946147|ref|ZP_02093358.1| hypothetical protein PEPMIC_00109 [Parvimonas micra ATCC 33270]
 gi|158447670|gb|EDP24665.1| hypothetical protein PEPMIC_00109 [Parvimonas micra ATCC 33270]
          Length = 433

 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 40/235 (17%), Positives = 86/235 (36%), Gaps = 19/235 (8%)

Query: 412 ISIYKDFGFEKIMVKLSTRPEKRVG-SDALWDDAENIMKGVLDTIKNSSQD----RINTG 466
           +    +F       +        +G  +AL+D     +K V + +K         +IN  
Sbjct: 213 LEKITEFIKISGSNEEIIEKLNSLGIKNALFDKGVEELKEVYNCMKLFGIPEDCIKINLT 272

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
           +  G   + G  +E  L++      Q G++        R++    N  S+    V I   
Sbjct: 273 ITRGLDYYTGTVYETFLEN----YRQLGSVCSGG----RYDDLASNYTSQILPGVGISIG 324

Query: 527 VFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF 586
           +     R    +++       +  + I A++  +  +  +YA ++ N  ++    I+  F
Sbjct: 325 L----TRLFYQLLDKN-LFKEIKTNSIDALIIPM-ENCYDYAIKLLNKFENSGKIIQIYF 378

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            +  +  KI       IP III G+ E +  +  ++   +     V     I ++
Sbjct: 379 EDAKMKKKISYADKLNIPYIIIVGEDEKANNTYTVKDLKTGEQSTVDFEGLIKLI 433


>gi|146298558|ref|YP_001193149.1| glycyl-tRNA synthetase [Flavobacterium johnsoniae UW101]
 gi|146152976|gb|ABQ03830.1| glycyl-tRNA synthetase [Flavobacterium johnsoniae UW101]
          Length = 513

 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 56/344 (16%), Positives = 109/344 (31%), Gaps = 33/344 (9%)

Query: 308 SGHWDSYRA-NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEF 365
           S +W   +  N+        + ++     L+P    G    F +  KS   ++P  +A+ 
Sbjct: 186 SRNWTDVKQFNLMFGTKLGASAENAMDLYLRPETAQGIFVNFLNVQKSGRMKVPFGIAQT 245

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKI 423
           G  +RNE   +   + R+R F Q +   F     E  + E  K   L   +    G E  
Sbjct: 246 GKAFRNEIV-ARQFIFRMREFEQMEMQFFVRPGEEMQWYEHWKQTRLNWHLSLGLGKENY 304

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL-GEGAFYGPKFEYI 482
                 +      + A  +         L+ I + +   +       G    Y   F+  
Sbjct: 305 RFHDHEKLAHYANAAADIEFNFPFGFKELEGIHSRTDFDLKAHEQYSGRKLQY---FDPE 361

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           L +         ++ +D    + F         E                       E  
Sbjct: 362 LNENYVPYVVETSVGLDRMFLAVFATSLQEETLEDGS--------------------ERT 401

Query: 543 KGNLPLWLSPIQAIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              LP  L+P +A V  +       E +++I   LK    ++  D ++  +  + R    
Sbjct: 402 VLKLPAVLAPTKAAVLPLVKKDGLPEISKKIIEDLK-WDFNVSYDEKDA-VGRRYRRQDA 459

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
              P  I    +   + ++ IR   +    +V + +   I+  E
Sbjct: 460 LGTPFCITVDHQTLEDETVTIRHRDTMKQDRVKISELRGIIENE 503


>gi|78186477|ref|YP_374520.1| seryl-tRNA synthetase [Chlorobium luteolum DSM 273]
 gi|123583337|sp|Q3B5A4|SYS_PELLD RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|78166379|gb|ABB23477.1| seryl-tRNA synthetase [Chlorobium luteolum DSM 273]
          Length = 430

 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/221 (14%), Positives = 74/221 (33%), Gaps = 21/221 (9%)

Query: 244 RDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEINTP 297
           ++H +L + + +          G+G   +  KG ++ + LI++M  +  +   Y E+  P
Sbjct: 142 KNHLELGKALGILDFERGAKVTGAGFPVYVGKGARLERALINFMLDRHTEEHGYTEVFPP 201

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++++   + +G W  +   ++ +        +       P        +    + S   
Sbjct: 202 FLVNRDSLRGTGQWPKFADQVYHM--------EEDELYAIPTAEVPVTNLHRDEMLSAEA 253

Query: 358 LPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           LP+  A + + +R E         G +RV  F + +   F   E+ +     I     +I
Sbjct: 254 LPISYAAYSACFRREAGSYGKDTRGFLRVHQFNKVEMVKFTRPEESYAALETIRGHAEAI 313

Query: 415 YKDFGFEKI----MVKLSTRPEKRVGSDALWDDAENIMKGV 451
                             +    +     +W  AE      
Sbjct: 314 LCALEIPYRVLLLCSGDISANAAKCYDIEVWSPAERKYLEA 354


>gi|315185720|gb|EFU19487.1| glycyl-tRNA synthetase [Spirochaeta thermophila DSM 6578]
          Length = 443

 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 59/432 (13%), Positives = 127/432 (29%), Gaps = 79/432 (18%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKI---KDDYEEINTPQVLDQHLWQQSGHWDSYRA--- 316
           S    +   G ++   +  +   ++   + +   ++   ++   +W+ SGH +++     
Sbjct: 30  SSAWDYGPLGVELKNNIERFWWNEMVRKRRNIVGLDAAILMHPKVWEASGHVENFHDPLV 89

Query: 317 -----------------------------------NMFAVKCADDTIKDLRTFALKPMNC 341
                                              N+           +     L+P   
Sbjct: 90  DCKECKARFRADQIDLSAPCPECGAKDSFTEPRQFNLMFKTHLGPVEDESTVVYLRPETA 149

Query: 342 PGHVAVFNHGLKSYR-ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
            G    + + L+S R ++P  +A+ G  +RNE   + + + R   F Q +   F    + 
Sbjct: 150 QGIYVNYKNCLQSSRLKVPFGIAQVGKAFRNEIV-TKNFIFRTCEFEQMEMQFFVHPSED 208

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQ 460
                      +  Y+  G     ++         G D L   A    K  +D      Q
Sbjct: 209 KKWFDYWKAERMEYYRKMGIRPEKLRFHQH-----GPDELAHYA----KEAVDI-----Q 254

Query: 461 DRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGT---IQVDFNLPSRFNAFYVNSHSEK 517
                G    EG      ++      + R  Q         D     R+  + + + +  
Sbjct: 255 YEFPFGWRELEGVHNRTDYD------LSRHSQFSGKDLSYFDDETRERYIPYIIETSAGL 308

Query: 518 CHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIV------TTITSSAVEYAQEI 571
              V++  +     E      +EN +    L   P+ A +               YAQ +
Sbjct: 309 TRSVLMVLSDAYDEEE-----LENGEKRTVLRFHPLIAPITVAVFPLMRRDGLDTYAQNL 363

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
              L+ H  +   D     I  + R       P  I    +   + ++ +R   S    +
Sbjct: 364 EEELRDH-FNTFYDESGA-IGRRYRRQDEVGTPYCITVDYQTLEDDTVTLRYRDSMEQVR 421

Query: 632 VSLLDAIPILTK 643
           V   + +  + +
Sbjct: 422 VHRNEVVSAIQQ 433


>gi|225853986|ref|YP_002735498.1| seryl-tRNA synthetase [Streptococcus pneumoniae JJA]
 gi|254783495|sp|C1CCH7|SYS_STRZJ RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|225723288|gb|ACO19141.1| seryl-tRNA synthetase [Streptococcus pneumoniae JJA]
          Length = 424

 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/243 (16%), Positives = 92/243 (37%), Gaps = 21/243 (8%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIF 276
           GT  +   E+ ++    E   E + H  L  ++ +          G+  +F+   G ++ 
Sbjct: 115 GTDEDDNVEVRRWGTPREFDFEPKAHWDLGEDLGILDWERGGKVTGARFLFYKGLGARLE 174

Query: 277 QTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFA 335
           + + ++M     K+ Y E+ TP +++      +G +  ++ + F +   +        F 
Sbjct: 175 RAIYNFMLDEHGKEGYTEVITPYIVNHDSMFGTGQYPKFKEDTFELSDTN--------FV 226

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAH 392
           L P         +   +   ++LP+        +R+E   +     GL+R+  F + +  
Sbjct: 227 LIPTAEVPLTNYYRDEILDGKDLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMV 286

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIM 448
            F   E+ + E  K+     +I +       +V LST              +W  A+N  
Sbjct: 287 KFAKPEESYEELEKMTANAENILQKLNLPYRVVALSTGDMGFSTAKTYDLEVWIPAQNNY 346

Query: 449 KGV 451
           + +
Sbjct: 347 REI 349


>gi|148988163|ref|ZP_01819626.1| seryl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
 gi|148993951|ref|ZP_01823321.1| seryl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
 gi|168488101|ref|ZP_02712300.1| seryl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|147926627|gb|EDK77700.1| seryl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
 gi|147927540|gb|EDK78567.1| seryl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
 gi|183573172|gb|EDT93700.1| seryl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|332075256|gb|EGI85726.1| seryl-tRNA synthetase [Streptococcus pneumoniae GA17570]
          Length = 424

 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/243 (16%), Positives = 92/243 (37%), Gaps = 21/243 (8%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIF 276
           GT  +   E+ ++    E   E + H  L  ++ +          G+  +F+   G ++ 
Sbjct: 115 GTDEDDNVEVRRWGTPREFDFEPKAHWDLGEDLGILDWERGGKVTGARFLFYKGLGARLE 174

Query: 277 QTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFA 335
           + + ++M     K+ Y E+ TP +++      +G +  ++ + F +   +        F 
Sbjct: 175 RAIYNFMLDEHGKEGYTEVITPYIVNHDSMFGTGQYPKFKEDTFELSDTN--------FV 226

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAH 392
           L P         +   +   ++LP+        +R+E   +     GL+R+  F + +  
Sbjct: 227 LIPTAEVPLTNYYRDEILDGKDLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMV 286

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIM 448
            F   E+ + E  K+     +I +       +V LST              +W  A+N  
Sbjct: 287 KFAKPEESYEELEKMTANAENILQKLNLPYRVVALSTGDMGFSATKTYDLEVWIPAQNNY 346

Query: 449 KGV 451
           + +
Sbjct: 347 REI 349


>gi|301793653|emb|CBW36038.1| seryl-tRNA synthetase [Streptococcus pneumoniae INV104]
          Length = 424

 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/243 (16%), Positives = 92/243 (37%), Gaps = 21/243 (8%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIF 276
           GT  +   E+ ++    E   E + H  L  ++ +          G+  +F+   G ++ 
Sbjct: 115 GTDEDDNVEVRRWGTPREFDFEPKAHWDLGEDLGILDWERGGKVTGARFLFYKGLGARLE 174

Query: 277 QTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFA 335
           + + ++M     K+ Y E+ TP +++      +G +  ++ + F +   +        F 
Sbjct: 175 RAIYNFMLDEHGKEGYTEVITPYIVNHDSMFGTGQYPKFKEDTFELSDTN--------FV 226

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAH 392
           L P         +   +   ++LP+        +R+E   +     GL+R+  F + +  
Sbjct: 227 LIPTAEVPLTNYYRDEILDGKDLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMV 286

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIM 448
            F   E+ + E  K+     +I +       +V LST              +W  A+N  
Sbjct: 287 KFAKPEESYEELEKMTANAENILQKLNLPYRVVALSTGDMGFSAAKTYDLEVWIPAQNNY 346

Query: 449 KGV 451
           + +
Sbjct: 347 REI 349


>gi|194397764|ref|YP_002037092.1| seryl-tRNA synthetase [Streptococcus pneumoniae G54]
 gi|238690854|sp|B5E7F2|SYS_STRP4 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|194357431|gb|ACF55879.1| seryl-tRNA synthetase [Streptococcus pneumoniae G54]
          Length = 424

 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 74/193 (38%), Gaps = 16/193 (8%)

Query: 267 FWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD 325
           F+   G ++ + + ++M     K+ Y E+ TP +++      +G +  ++ + F +   +
Sbjct: 165 FYKGLGARLERAIYNFMLDEHGKEGYTEVITPYIVNHDSMFGTGQYPKFKEDTFELSDTN 224

Query: 326 DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMR 382
                   F L P         +   +   ++LP+        +R+E   +     GL+R
Sbjct: 225 --------FVLIPTAEVPLTNYYRDEILDGKDLPIYFTAMSPSFRSEAGSAGRDTRGLIR 276

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSD 438
           +  F + +   F   E+ + E  K+     +I +       +V LST             
Sbjct: 277 LHQFHKVEMVKFAKPEESYEELEKMTANAENILQKLNLPYRVVALSTGDMGFSATKTYDL 336

Query: 439 ALWDDAENIMKGV 451
            +W  A+N  + +
Sbjct: 337 EVWIPAQNNYREI 349


>gi|229512814|ref|ZP_04402281.1| alanyl-tRNA synthetase [Vibrio cholerae TMA 21]
 gi|229350063|gb|EEO15016.1| alanyl-tRNA synthetase [Vibrio cholerae TMA 21]
          Length = 860

 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 25/145 (17%), Positives = 60/145 (41%), Gaps = 10/145 (6%)

Query: 55  REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQP 113
            +  ++ I  E  R+   + HS  H++  A++ +  E     G ++  +   +DF   + 
Sbjct: 543 TDDQVDAIVDEKRRAAISLNHSATHLLHAALRKVLGEHVAQKGSLVRAETLRFDFSHLEA 602

Query: 114 FSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTL 173
            +  E+ ++E+ + + I  +       ++ ++A+          K          + V +
Sbjct: 603 MTPAEIKEVERLVNQEIRHNHNIETNIMNIDEAKAKGAMALFGEKY--------DDQVRV 654

Query: 174 YRQGEW-FDLCRGPHVRSTGQVKKF 197
              G++  +LC G H  +TG +  F
Sbjct: 655 LSMGDFSTELCGGIHASNTGDIGLF 679


>gi|322391441|ref|ZP_08064910.1| serine--tRNA ligase [Streptococcus peroris ATCC 700780]
 gi|321145524|gb|EFX40916.1| serine--tRNA ligase [Streptococcus peroris ATCC 700780]
          Length = 424

 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/193 (16%), Positives = 74/193 (38%), Gaps = 16/193 (8%)

Query: 267 FWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD 325
           F+   G K+ + + ++M     K+ Y E+  P +++      +G +  ++ + F +   +
Sbjct: 165 FYKGLGAKLERAIYNFMLDEHAKEGYTEVIPPYMVNHDSMFGTGQYPKFKEDTFELSDTN 224

Query: 326 DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMR 382
                   + L P         +   +   ++LP+        +R+E   +     GL+R
Sbjct: 225 --------YVLIPTAEVPLTNYYRDEILDGKDLPIYFTAMSPSFRSEAGSAGRDTRGLIR 276

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSD 438
           +  F + +   F   E+ ++E  K+     +I +       +V LST             
Sbjct: 277 LHQFHKVEMVKFAKPEESYDELEKMVGNAENILQKLNLPYRVVALSTGDMGFSAAKTYDL 336

Query: 439 ALWDDAENIMKGV 451
            +W  A+N  + +
Sbjct: 337 EVWIPAQNTYREI 349


>gi|126662590|ref|ZP_01733589.1| glycyl-tRNA synthetase [Flavobacteria bacterium BAL38]
 gi|126625969|gb|EAZ96658.1| glycyl-tRNA synthetase [Flavobacteria bacterium BAL38]
          Length = 513

 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 60/346 (17%), Positives = 109/346 (31%), Gaps = 37/346 (10%)

Query: 308 SGHWDSYRA-NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEF 365
           S +W   +  N+        + ++     L+P    G    F +  K+   ++P  +A+ 
Sbjct: 186 SKNWTDVKQFNLMFGTKLGASAENAMDLYLRPETAQGIFVNFLNVQKTGRMKIPFGIAQT 245

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKI 423
           G  +RNE   +   + R+R F Q +   F     E  + E  K   L        G E  
Sbjct: 246 GKAFRNEIV-ARQFIFRMREFEQMEMQFFVKPGEEMKWYEYWKTTRLAWHQSLGLGKENY 304

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
                 +      + A  +         L+ I + +   +          F G K +Y  
Sbjct: 305 RFHDHEKLAHYANAAADIEFNFPFGFKELEGIHSRTDFDLKAHEQ-----FSGKKLQYFD 359

Query: 484 KDAIGRD---WQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
            D            ++ +D    + F+        E      + R               
Sbjct: 360 NDTNSNYTPYVVETSVGLDRMFLAVFSKSLQEETLEDGSTRTVLR--------------- 404

Query: 541 NFKGNLPLWLSPIQAIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
                LP  L+P +A V  +       E AQ I N LK    ++  D ++  +  + R  
Sbjct: 405 -----LPSVLAPTKAAVLPLVKKDGLPEVAQSIINELK-WDFNVAYDEKDA-VGRRYRRQ 457

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
                P  I    +   + ++ IR   S    +V +     I+  E
Sbjct: 458 DALGTPFCITVDHQTLEDETVTIRHRDSMQQDRVKISALRDIINNE 503


>gi|325686987|gb|EGD29011.1| serine--tRNA ligase [Streptococcus sanguinis SK72]
          Length = 425

 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 73/193 (37%), Gaps = 16/193 (8%)

Query: 267 FWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD 325
           F+   G ++ + + ++M     K+ Y E+ TP +++      +G +  ++ + F +   +
Sbjct: 165 FYKGLGARLERAIYNFMLDEHGKEGYTEVITPYMVNHDSMFGTGQYPKFKEDTFELSDTN 224

Query: 326 DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMR 382
                   F L P         +   +   +ELP+        +R+E   +     GL+R
Sbjct: 225 --------FVLIPTAEVPLTNYYRDEILDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIR 276

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSD 438
           +  F + +   F   E+ + E  K+     +I +       +V L T             
Sbjct: 277 LHQFHKVEMVKFAKPEESYEELEKMTANAENILQKLNLPYRVVALCTGDMGFSAAKTYDL 336

Query: 439 ALWDDAENIMKGV 451
            +W  A+N  + +
Sbjct: 337 EVWIPAQNTYREI 349


>gi|149003505|ref|ZP_01828379.1| seryl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
 gi|168494543|ref|ZP_02718686.1| seryl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
 gi|237650372|ref|ZP_04524624.1| seryl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974]
 gi|237822060|ref|ZP_04597905.1| seryl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974M2]
 gi|147758441|gb|EDK65440.1| seryl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
 gi|183575522|gb|EDT96050.1| seryl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
          Length = 424

 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 51/354 (14%), Positives = 115/354 (32%), Gaps = 51/354 (14%)

Query: 120 AQIEKKMQEIIARDSPF---------LKQYLSHEKARELFESKKEAYKVEILESIPA--- 167
           A +  +M+EI A+              +  +S E A+     +    K+  ++++ A   
Sbjct: 25  AAVLNEMKEIDAKRRNILVKVETLKAERNTVSAEIAQAKRNKENTDDKIAAMQNLSAEVK 84

Query: 168 --KENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAW 225
                +              P++ +        +   V    W             GT  
Sbjct: 85  ALDAELAEIDAKLTEFTTTLPNIPADSVPVGADEDDNVEVRRW-------------GTPR 131

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYM-R 284
               E   +    E+    D  +  +      +        F+   G ++ + + ++M  
Sbjct: 132 EFDFEPKAHWDLGEDLGILDWERGGKVTGARFL--------FYKGLGARLERAIYNFMLD 183

Query: 285 RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
              K+ Y E+ TP +++      +G +  ++ + F +   +        F L P      
Sbjct: 184 EHGKEGYTEVITPYIVNHDSMFGTGQYPKFKEDTFELSDTN--------FVLIPTAEVPL 235

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMF 401
              +   +   ++LP+        +R+E   +     GL+R+  F + +   F   E+ +
Sbjct: 236 TNYYRDEILDGKDLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESY 295

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
            E  K+     +I +       +V LST              +W  A+N  + +
Sbjct: 296 EELEKMTANAENILQKLNLPYRVVALSTGDMGFSATKTYDLEVWIPAQNNYREI 349


>gi|268317174|ref|YP_003290893.1| histidyl-tRNA synthetase [Rhodothermus marinus DSM 4252]
 gi|262334708|gb|ACY48505.1| histidyl-tRNA synthetase [Rhodothermus marinus DSM 4252]
          Length = 436

 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 60/423 (14%), Positives = 133/423 (31%), Gaps = 78/423 (18%)

Query: 274 KIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDS--YRANMFAVKCADDTIKD 330
           + +Q +   +R  ++  ++ EI TP +    L  +     +      MFA +  D     
Sbjct: 32  RAWQHVEQVVREVLERFNFREIRTPILEPTELIARGVGQLTDIVSKEMFAFRRGD----- 86

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD- 389
              + L+P      +  +       +    +L   G  +R E         R R F Q  
Sbjct: 87  -TNYVLRPEVTAPVMRAYLQHRLDQQGAVQKLYYIGPCFRAENPQK----GRYRQFHQFG 141

Query: 390 -DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIM 448
            +     T E       ++   ++++Y+ FG + + ++++T     +G           +
Sbjct: 142 VELIGAETPEADA----EVIAAMMAVYEAFGLKNLRLRINT-----LGDAESRPRYREAL 192

Query: 449 KGVLDTIK------------------------------NSSQDRINTGVLLGEGAFYGPK 478
           +  L  +                                 +   I+     G   +   K
Sbjct: 193 RAYLQPLADRLTPTSRQRLETNPLRILDTKDERERRLLEGAPRIIDFVDEKGRAHYEAVK 252

Query: 479 -------------------FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
                               +Y        +      Q       R++   ++   +   
Sbjct: 253 AHLQALGIAFEEDPFLVRGLDYYTHTTFELESPDLGAQSALAGGGRYDLLAMDLGHDAPV 312

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH 579
           P +        IER    +    +G       P+ A + ++   A+  A   A  L+   
Sbjct: 313 PAV---GFAAGIERLFIAL--QAQGYAFPEEPPLDAYLVSLGEEAMRRALVEAQALRRAG 367

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
           L ++ D +  ++  ++RE + ++    +I G++E +E    +R   S   Q+V L +   
Sbjct: 368 LRVDLDLKGRSMKAQMREANRQQARYAVIMGERELAEGRAVVRDMQSGQQQEVPLDELAD 427

Query: 640 ILT 642
            L 
Sbjct: 428 FLK 430


>gi|168490677|ref|ZP_02714820.1| seryl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
 gi|183575046|gb|EDT95574.1| seryl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
          Length = 424

 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/243 (16%), Positives = 92/243 (37%), Gaps = 21/243 (8%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIF 276
           GT  +   E+ ++    E   E + H  L  ++ +          G+  +F+   G ++ 
Sbjct: 115 GTDEDDNVEVRRWGTPREFDFEPKAHWDLGEDLGILDWERGGKVTGARFLFYKGLGARLE 174

Query: 277 QTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFA 335
           + + ++M     K+ Y E+ TP +++      +G +  ++ + F +   +        F 
Sbjct: 175 RAIYNFMLDEHGKEGYTEVITPYIVNHDSMFGTGQYPKFKEDTFELSDTN--------FV 226

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAH 392
           L P         +   +   ++LP+        +R+E   +     GL+R+  F + +  
Sbjct: 227 LIPTAEVPLTNYYRDEILDGKDLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMV 286

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIM 448
            F   E+ + E  K+     +I +       +V LST              +W  A+N  
Sbjct: 287 KFAKPEESYEELEKMTANAENILQKLNLPYRVVALSTGDMGFSAAKTYDLEVWIPAQNNY 346

Query: 449 KGV 451
           + +
Sbjct: 347 REI 349


>gi|311031528|ref|ZP_07709618.1| histidyl-tRNA synthetase [Bacillus sp. m3-13]
          Length = 426

 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 71/415 (17%), Positives = 140/415 (33%), Gaps = 57/415 (13%)

Query: 276 FQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           +Q + +  +   +  +Y+EI TP + +       G  D+   ++   +      +  R+ 
Sbjct: 20  WQYIEAKAKEICELYNYKEIRTP-IFESTELFLRGVGDT--TDVVQKEMYTFEDRGGRSL 76

Query: 335 ALKP--MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
            L+P          V N    S  + P +L   G ++R E   +     R R F Q    
Sbjct: 77  TLRPEGTAAVARSYVNNKMFGSPTQ-PTKLYYIGQMFRYERPQA----GRFRQFVQFGIE 131

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEK---IMVKLSTRPEKRVGSDALWDDAENIMK 449
              + +   +   ++  L + +YK  G      ++  L  +  ++   DAL +  +  + 
Sbjct: 132 ALGSNDPSIDA--EVIALAVELYKSLGLNNLKVVINSLGDKESRQAHRDALINHFQPRIN 189

Query: 450 G---------------VLDTIKNSSQD------RINTGVLLGEGAFY----------GPK 478
                           +LD  K+   +       I   +     A++          G +
Sbjct: 190 EFCGDCQGRLEKNPLRILDCKKDRDHELMATAPSILDYLNEESKAYFDKVVAYLSALGIQ 249

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS--------EKCHPVMIHRAVFGS 530
           +E       G D+   T     +    F A               E   P         S
Sbjct: 250 YEIDPNLVRGLDYYYHTAFEIMSTSEGFGAITTLCGGGRYNGLVQEIGGPETPGIGFALS 309

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
           IER I  M E      P     I   V  +   A E A ++   L+   +  E D++++ 
Sbjct: 310 IERLISAM-EAENVKFPFE-DSIDCYVVALGDKAKETAVKLLFDLRKAGIVAEKDYQDKK 367

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           +  + +     +    I+ GD E  +  + I+   +   Q+V+  DA+  +T + 
Sbjct: 368 MKAQFKAADRLQAKYTIVFGDDELEKGVVSIKEMETGEQQEVAFEDAVAFITAKK 422


>gi|169832533|ref|YP_001693918.1| seryl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
 gi|238688320|sp|B1I9K5|SYS_STRPI RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|168995035|gb|ACA35647.1| seryl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
          Length = 424

 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 74/193 (38%), Gaps = 16/193 (8%)

Query: 267 FWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD 325
           F+   G ++ + + ++M     K+ Y E+ TP +++      +G +  ++ + F +   +
Sbjct: 165 FYKGLGARLERAIYNFMLDEHGKEGYTEVITPYIVNHDSMFGTGQYPKFKEDTFELSDTN 224

Query: 326 DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMR 382
                   F L P         +   +   ++LP+        +R+E   +     GL+R
Sbjct: 225 --------FVLIPTAEVPLTNYYRDEILDGKDLPIYFTAMSPSFRSEAGSAGRDTRGLIR 276

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSD 438
           +  F + +   F   E+ + E  K+     +I +       +V LST             
Sbjct: 277 LHQFHKVEMVKFAKPEESYEELEKMTANAENILQKLNLPYRVVALSTGDMGFSAAKTYDL 336

Query: 439 ALWDDAENIMKGV 451
            +W  A+N  + +
Sbjct: 337 EVWIPAQNNYREI 349


>gi|111115194|ref|YP_709812.1| glycyl-tRNA synthetase [Borrelia afzelii PKo]
 gi|123047003|sp|Q0SNE2|SYG_BORAP RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|110890468|gb|ABH01636.1| glycyl-tRNA synthetase [Borrelia afzelii PKo]
          Length = 445

 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 64/432 (14%), Positives = 127/432 (29%), Gaps = 70/432 (16%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKDDYEEIN---TPQVLDQHLWQQSGHWDSYRANMF 319
           SGV  +   G ++ + +     + +   +E I    +   +   +W+ SGH D +  +M 
Sbjct: 28  SGVWDYGPLGIELKENIKREWWKSMVYLHENIVGLDSAIFMRSEIWKASGHIDGFSDSMV 87

Query: 320 AVKCADDTIKDL--------------------------------------RTFALKPMNC 341
             K      +                                            L+P   
Sbjct: 88  DCKDCKSRFRADFVDLSKNCPNCKVGNNFTSPRNFNLMFKTHIGVVEDSSSEIYLRPETA 147

Query: 342 PGHVAVFNHGLKSYR-ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQ 399
            G    F + L S R ++P  +A+ G  +RNE   + + + R   F Q +   F    + 
Sbjct: 148 QGIFVNFRNVLDSSRLKIPFGIAQVGKAFRNEIV-AKNFIFRTCEFEQMEMQFFVHPKQI 206

Query: 400 MFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSS 459
               C    N +    +        ++L       +   A         K   D      
Sbjct: 207 DEWFCYWQQNRMNFFIETLKIRPDRLRLKAHNSTELAHYA---------KSAFDI----- 252

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
           +     G    EG      ++         + +      D     R+  + + + +    
Sbjct: 253 EYEFPFGFQEIEGIHNRGNYDLTQHSKFSNNSKVFEYH-DLLTKERYVPYVIETSAGLTR 311

Query: 520 PVMIHRAVFGSIERFIGIMIENFK---GNLPLWLSPIQAIVTTITSSA--VEYAQEIANL 574
            V++      S E     + +  K     L   L+P +  +  +      VE A+ I   
Sbjct: 312 SVLMTLCDAYSEEE----LSDGDKRIVLRLHPKLAPYKIAIFPLVKKVELVEVARRIYVE 367

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           L      I  D    TI  + R       P  +        + ++ +R   + T +++ +
Sbjct: 368 LCD-DFHIFYDDSG-TIGKRYRRQDEIGTPYCVTVDYNTIEDETVTVRERNNMTQKRIFI 425

Query: 635 LDAIPILTKESL 646
            D    +  E L
Sbjct: 426 NDLYSYIKTEIL 437


>gi|258511993|ref|YP_003185427.1| alanyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257478719|gb|ACV59038.1| alanyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 879

 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/157 (21%), Positives = 69/157 (43%), Gaps = 15/157 (9%)

Query: 42  AINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE 101
            ++G +      ++  S+     ED R   V  H+  H++ +A++ +        G ++E
Sbjct: 536 VVDGSL------LQGDSVRAHVDEDFRRDIVKNHTATHLLHKALRDVLGTHVAQAGSLVE 589

Query: 102 DG-FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVE 160
                +DF    P + +ELA++E+++ + I RD     + +  ++A+ +        K  
Sbjct: 590 PERLRFDFSHFGPLTDEELAEVERRVNDEIWRDHAVHIREMDLDEAKAMGAMALFGEKY- 648

Query: 161 ILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
                   + V + + GE  +LC G HV  T  + +F
Sbjct: 649 -------GQRVRVVQAGESIELCGGCHVPRTSVIGQF 678


>gi|116516325|ref|YP_815885.1| seryl-tRNA synthetase [Streptococcus pneumoniae D39]
 gi|148983808|ref|ZP_01817127.1| seryl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
 gi|161410754|ref|NP_357966.2| seryl-tRNA synthetase [Streptococcus pneumoniae R6]
 gi|30173153|sp|Q8DR22|SYS_STRR6 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|122279229|sp|Q04M63|SYS_STRP2 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|116076901|gb|ABJ54621.1| seryl-tRNA synthetase [Streptococcus pneumoniae D39]
 gi|147923955|gb|EDK75067.1| seryl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
 gi|301799511|emb|CBW32058.1| seryl-tRNA synthetase [Streptococcus pneumoniae OXC141]
          Length = 424

 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 51/354 (14%), Positives = 115/354 (32%), Gaps = 51/354 (14%)

Query: 120 AQIEKKMQEIIARDSPF---------LKQYLSHEKARELFESKKEAYKVEILESIPA--- 167
           A +  +M+EI A+              +  +S E A+     +    K+  ++++ A   
Sbjct: 25  AAVLNEMKEIDAKRRNILVKVETLKAERNTVSAEIAQAKRNKENTDDKIAAMQNLSAEVK 84

Query: 168 --KENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAW 225
                +              P++ +        +   V    W             GT  
Sbjct: 85  ALDAELAEIDAKLTEFTTTLPNIPADSVPVGADEDDNVEVRRW-------------GTPR 131

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYM-R 284
               E   +    E+    D  +  +      +        F+   G ++ + + ++M  
Sbjct: 132 EFDFEPKAHWDLGEDLGILDWERGGKVTGARFL--------FYKGLGARLERAIYNFMLD 183

Query: 285 RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
              K+ Y E+ TP +++      +G +  ++ + F +   +        F L P      
Sbjct: 184 EHGKEGYTEVITPYIVNHDSMFGTGQYPKFKEDTFELSDTN--------FVLIPTAEVPL 235

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMF 401
              +   +   ++LP+        +R+E   +     GL+R+  F + +   F   E+ +
Sbjct: 236 TNYYRDEILDGKDLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESY 295

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
            E  K+     +I +       +V LST              +W  A+N  + +
Sbjct: 296 EELEKMTANAENILQKLNLPYRVVALSTGDMGFSATKTYDLEVWIPAQNNYREI 349


>gi|296877087|ref|ZP_06901128.1| serine--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
 gi|296431948|gb|EFH17754.1| serine--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
          Length = 446

 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/222 (16%), Positives = 85/222 (38%), Gaps = 20/222 (9%)

Query: 242 EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINT 296
           E + H  L  ++D+          G+  +F+   G ++ + + ++M     K+ Y E+  
Sbjct: 157 EPKAHWDLGEDLDILDWERGAKVTGARFLFYKGLGARLERAIYNFMLDEHGKEGYTEVIP 216

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +++      +G +  ++ + F +   +        + L P         +   +   +
Sbjct: 217 PYMVNHDSMFGTGQYPKFKEDTFELSDTN--------YVLIPTAEVPLTNYYRDEILDGK 268

Query: 357 ELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           +LP+        +R+E   +     GL+R+  F + +   F   E+ ++E  K+     +
Sbjct: 269 DLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFSKPEESYDELEKMVVNAEN 328

Query: 414 IYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
           I +       +V LST              +W  A+N  + +
Sbjct: 329 ILQKLNLPYRVVALSTGDMGFSAAKTYDLEVWIPAQNTYREI 370


>gi|229828473|ref|ZP_04454542.1| hypothetical protein GCWU000342_00535 [Shuttleworthia satelles DSM
           14600]
 gi|229793067|gb|EEP29181.1| hypothetical protein GCWU000342_00535 [Shuttleworthia satelles DSM
           14600]
          Length = 921

 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/152 (21%), Positives = 67/152 (44%), Gaps = 10/152 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFS 115
             + +    D R+     HS  H++  A++ +  +     G  ++D    +DF      S
Sbjct: 590 DRVTLQVDADRRANIARNHSATHLLHRALREVLGDHVQQKGSYVDDKKLRFDFVHFSAMS 649

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           ++E+ ++E  + E IA D P + + +S E A++         K          + V +  
Sbjct: 650 TEEIRKVEDLVNERIAADIPVVTEIMSQEDAKKTGAMALFGEKY--------GDEVRVVE 701

Query: 176 QGEW-FDLCRGPHVRSTGQVKKFFKLMKVAGA 206
            G++  +LC G HV  TG+++ F  + +V  +
Sbjct: 702 MGDYSTELCGGTHVGRTGKIQAFKVISEVGSS 733


>gi|157151414|ref|YP_001450960.1| seryl-tRNA synthetase [Streptococcus gordonii str. Challis substr.
           CH1]
 gi|189083593|sp|A8AYV0|SYS_STRGC RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|157076208|gb|ABV10891.1| seryl-tRNA synthetase [Streptococcus gordonii str. Challis substr.
           CH1]
          Length = 425

 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 73/193 (37%), Gaps = 16/193 (8%)

Query: 267 FWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD 325
           F+   G ++ + + ++M     K+ Y E+ TP +++      +G +  ++ + F +   +
Sbjct: 165 FYKGLGARLERAIYNFMLDEHGKEGYTEVITPYMVNHDSMFGTGQYPKFKEDTFELSDTN 224

Query: 326 DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMR 382
                   F L P         +   +   +ELP+        +R+E   +     GL+R
Sbjct: 225 --------FVLIPTAEVPLTNYYRDEILDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIR 276

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSD 438
           +  F + +   F   E+ + E  K+     +I +       +V L T             
Sbjct: 277 LHQFHKVEMVKFAKPEESYEELEKMTANAENILQKLNLPYRVVALCTGDMGFSAAKTYDL 336

Query: 439 ALWDDAENIMKGV 451
            +W  A+N  + +
Sbjct: 337 EVWIPAQNTYREI 349


>gi|183983647|ref|YP_001851938.1| glycyl-tRNA synthetase GlyS [Mycobacterium marinum M]
 gi|183176973|gb|ACC42083.1| glycyl-tRNA synthetase GlyS [Mycobacterium marinum M]
          Length = 463

 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 56/356 (15%), Positives = 110/356 (30%), Gaps = 50/356 (14%)

Query: 307 QSGHWDS-YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAE 364
           + G W      NM           +     L+P    G    F + L  S ++ P  + +
Sbjct: 132 EPGQWTEPREFNMMLKTYLGPIETEEGLHYLRPETAQGIFVNFANVLTTSRKKPPFGIGQ 191

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
            G  +RNE +   + + R R F Q +   F              +  +  Y D G +   
Sbjct: 192 IGKSFRNEITPG-NFIFRTREFEQMEMEFFVEPSTAKEWHQYWIDTRLQWYVDLGIDAEN 250

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           ++L   P+         +   +     +D            G L G            + 
Sbjct: 251 LRLFEHPK---------EKLSHYSDRTVDIEYKFGFVGNPWGELEG------------VA 289

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----E 540
           +    D    +      L      FY      +  P +I     G    F+  +I    E
Sbjct: 290 NRTDFDLSTHSKHSGTELS-----FYDQVEDVRYTPYVIE-PAAGLTRSFMAFLIDAYTE 343

Query: 541 NFKGN------------LPLWLSPIQAIVTTIT--SSAVEYAQEIANLLKSHHLSIETDF 586
           +   N            L   L+P++A V  ++  +     A+++A  L+ +  +I+ D 
Sbjct: 344 DEAPNAKGGVDKRTVLRLDPRLAPVKAAVLPLSRHADLSPKARDLAAELRKY-WNIDFDD 402

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
               I  + R       P  +        + ++ +R   + T +++ +      L 
Sbjct: 403 AGA-IGRRYRRQDEIGTPFCVTVDFDSLEDDAVTVRERDAMTQERIGIAKVADYLA 457


>gi|58337235|ref|YP_193820.1| histidyl-tRNA synthetase [Lactobacillus acidophilus NCFM]
 gi|227903819|ref|ZP_04021624.1| histidyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
 gi|75507609|sp|Q5FKI5|SYH_LACAC RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|58254552|gb|AAV42789.1| histidyl-tRNA synthetase [Lactobacillus acidophilus NCFM]
 gi|227868706|gb|EEJ76127.1| histidyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
          Length = 428

 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 61/411 (14%), Positives = 118/411 (28%), Gaps = 51/411 (12%)

Query: 269 HRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
                  +Q +    R      +Y EI TP       ++         + +   +  D  
Sbjct: 13  LPDQSSSWQKVEETARNFFNRANYREIRTP---SFENYEIFSRSSGDSSEIVEKQMYDFN 69

Query: 328 IKDLRTFALKPMNCPGHVAVF--NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRG 385
            K  R  AL+P    G V  +  +         P  +    S +R E   +     R R 
Sbjct: 70  DKGGRHIALRPEGTAGVVRAYVEDKMYAPEVVKPFNVFYMESTFRYERPQA----GRQRE 125

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNL----------IISIYKDFGFEKIMVKLSTRPEKRV 435
           F Q     F +   + +    +                     G E++            
Sbjct: 126 FHQIGVESFGSSNPLADVQTIMMGHDLLAELGVKNYQLHINTLGNEQVRKDYHDALVNYF 185

Query: 436 G--SDALWDDAENIMKG----VLDTIKNSSQDRINTGVLLGEGAFYGPK----------- 478
               D L +D++  ++     +LD+     +  +     + E      K           
Sbjct: 186 TPVKDELSEDSQRRLRDNPLRILDSKDERDKKFLPDAPKIREFLDDDTKNNFESILKMLD 245

Query: 479 ---FEYILKDAI--GRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIH--------R 525
               +Y++ D +  G D+  G I                      +  ++          
Sbjct: 246 QLGIDYVIDDDLVRGLDYYTGVIFEFMVEDKSLWESATTILGGGRYDHLVEEFNGPATPA 305

Query: 526 AVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD 585
             FG  E  + +++E     L    + I   +  I     + A EI   L+      + D
Sbjct: 306 VGFGIGEERLMLVLEKQNPAL-FESNSIDFFIANIGEGTAQKAIEITRSLRKQGFEADFD 364

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
              + +  + ++        +I  G+KE     + I+R     T  +SL D
Sbjct: 365 VNQKKLKAQFKKADRDHAKYVITLGEKELENGVLNIKRLSDGKTIDLSLED 415


>gi|319952720|ref|YP_004163987.1| glycyl-tRNA synthetase [Cellulophaga algicola DSM 14237]
 gi|319421380|gb|ADV48489.1| glycyl-tRNA synthetase [Cellulophaga algicola DSM 14237]
          Length = 513

 Score = 72.1 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 54/352 (15%), Positives = 107/352 (30%), Gaps = 51/352 (14%)

Query: 308 SGHWDSYRA-NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEF 365
           S +W   +  N+        +        L+P    G    F +  K+   ++P  +A+ 
Sbjct: 186 SKNWTDVKQFNLMFGTKLGASADSAMDLYLRPETAQGIFVNFLNVQKTGRMKIPFGIAQV 245

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
           G  +RNE   +   + R R F Q +   F           K     +  +   G  +   
Sbjct: 246 GKAFRNEIV-ARQFIFRQREFEQMEMQFFIQPGTQQEWYEKWKENRMKWHLSLGLGQENY 304

Query: 426 KLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKD 485
           +     +    +DA  D                 + +   G    EG      F+     
Sbjct: 305 RFHDHEKLAHYADAAADI----------------EFKFPFGFKELEGIHSRTNFDL---- 344

Query: 486 AIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM------- 538
           +    +    +Q   N              ++ +   +     G    F+ +        
Sbjct: 345 SQHEKFSGKKLQYFDN------------DLKESYVPYVVETSIGLDRMFLAVFSNSLEEE 392

Query: 539 -----IENFKGNLPLWLSPIQAIV--TTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
                       LP  L+P +A V          E A EI N LK    ++  D ++  +
Sbjct: 393 ELENGTTRTVLKLPAVLAPTKAAVFPLVKKDGLPELAHEIINELK-WEFNVFYDEKDA-V 450

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             + R       P  I    +   ++++ IR   +   ++V++ D   ++ K
Sbjct: 451 GKRYRRQDANGTPFCITVDHQSLEDKTVTIRHRDTMEQERVAISDLKTMINK 502


>gi|171778068|ref|ZP_02919325.1| hypothetical protein STRINF_00160 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171283050|gb|EDT48474.1| hypothetical protein STRINF_00160 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 425

 Score = 72.1 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 77/199 (38%), Gaps = 16/199 (8%)

Query: 261 DGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMF 319
            GS  +F+   G ++ + + ++M     K+ Y E+  P +++      +G +  ++ + F
Sbjct: 159 TGSRFLFYKGLGARLERAIYNFMLDEHAKEGYTEVIPPYMVNHDSMFGTGQYPKFKEDTF 218

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS--- 376
            +  +D        + L P         +   +   +ELPV        +R+E   +   
Sbjct: 219 ELANSD--------YVLIPTAEVPLTNYYRGEILDGKELPVYFTAMSPSFRSEAGSAGRD 270

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR-- 434
             GL+R+  F + +   F   E  ++E  K+     +I +  G    ++ L T       
Sbjct: 271 TRGLIRLHQFHKVEMVKFSKPETSYDELEKMVANAENILQKLGLPYRVITLCTGDMGFSA 330

Query: 435 --VGSDALWDDAENIMKGV 451
                  +W  A+N  + +
Sbjct: 331 AKTYDLEVWIPAQNTYREI 349


>gi|15900330|ref|NP_344934.1| seryl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
 gi|111657630|ref|ZP_01408364.1| hypothetical protein SpneT_02001184 [Streptococcus pneumoniae
           TIGR4]
 gi|148996814|ref|ZP_01824532.1| seryl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
 gi|149023698|ref|ZP_01836178.1| seryl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
 gi|168576870|ref|ZP_02722720.1| seryl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
 gi|225860434|ref|YP_002741943.1| seryl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
 gi|298229691|ref|ZP_06963372.1| seryl-tRNA synthetase [Streptococcus pneumoniae str. Canada
           MDR_19F]
 gi|298254625|ref|ZP_06978211.1| seryl-tRNA synthetase [Streptococcus pneumoniae str. Canada
           MDR_19A]
 gi|298502204|ref|YP_003724144.1| seryl-tRNA synthetase [Streptococcus pneumoniae TCH8431/19A]
 gi|307067059|ref|YP_003876025.1| seryl-tRNA synthetase [Streptococcus pneumoniae AP200]
 gi|30173203|sp|Q97SG0|SYS_STRPN RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|254783497|sp|C1CPS1|SYS_STRZT RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|14971880|gb|AAK74574.1| seryl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
 gi|147757389|gb|EDK64428.1| seryl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
 gi|147929635|gb|EDK80627.1| seryl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
 gi|183577467|gb|EDT97995.1| seryl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
 gi|225728141|gb|ACO23992.1| seryl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
 gi|298237799|gb|ADI68930.1| seryl-tRNA synthetase [Streptococcus pneumoniae TCH8431/19A]
 gi|306408596|gb|ADM84023.1| Seryl-tRNA synthetase [Streptococcus pneumoniae AP200]
 gi|327390820|gb|EGE89160.1| seryl-tRNA synthetase [Streptococcus pneumoniae GA04375]
 gi|332202320|gb|EGJ16389.1| seryl-tRNA synthetase [Streptococcus pneumoniae GA41317]
          Length = 424

 Score = 72.1 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 51/354 (14%), Positives = 115/354 (32%), Gaps = 51/354 (14%)

Query: 120 AQIEKKMQEIIARDSPF---------LKQYLSHEKARELFESKKEAYKVEILESIPA--- 167
           A +  +M+EI A+              +  +S E A+     +    K+  ++++ A   
Sbjct: 25  AAVLNEMKEIDAKRRNILVKVETLKAERNTVSAEIAQAKRNKENTDDKIAAMQNLSAEVK 84

Query: 168 --KENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAW 225
                +              P++ +        +   V    W             GT  
Sbjct: 85  ALDAELAEIDAKLTEFTTTLPNIPADSVPVGADEDDNVEVRRW-------------GTPR 131

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYM-R 284
               E   +    E+    D  +  +      +        F+   G ++ + + ++M  
Sbjct: 132 EFDFEPKAHWDLGEDLGILDWERGGKVTGARFL--------FYKGLGARLERAIYNFMLD 183

Query: 285 RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
              K+ Y E+ TP +++      +G +  ++ + F +   +        F L P      
Sbjct: 184 EHGKEGYTEVITPYIVNHDSMFGTGQYPKFKEDTFELSDTN--------FVLIPTAEVPL 235

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMF 401
              +   +   ++LP+        +R+E   +     GL+R+  F + +   F   E+ +
Sbjct: 236 TNYYRDEILDGKDLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESY 295

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
            E  K+     +I +       +V LST              +W  A+N  + +
Sbjct: 296 EELEKMTANAENILQKLNLPYRVVALSTGDMGFSAAKTYDLEVWIPAQNNYREI 349


>gi|168482647|ref|ZP_02707599.1| seryl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
 gi|172043721|gb|EDT51767.1| seryl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
 gi|332077694|gb|EGI88155.1| seryl-tRNA synthetase [Streptococcus pneumoniae GA41301]
 gi|332203581|gb|EGJ17648.1| seryl-tRNA synthetase [Streptococcus pneumoniae GA47368]
          Length = 424

 Score = 72.1 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 51/354 (14%), Positives = 115/354 (32%), Gaps = 51/354 (14%)

Query: 120 AQIEKKMQEIIARDSPF---------LKQYLSHEKARELFESKKEAYKVEILESIPA--- 167
           A +  +M+EI A+              +  +S E A+     +    K+  ++++ A   
Sbjct: 25  AAVLNEMKEIDAKRRNILVKVETLKAERNTVSAEIAQAKRNKENTDDKIAAMQNLSAEVK 84

Query: 168 --KENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAW 225
                +              P++ +        +   V    W             GT  
Sbjct: 85  ALDAELAEIDAKLTEFTTTLPNIPADSVPVGADEDDNVEVRRW-------------GTPR 131

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYM-R 284
               E   +    E+    D  +  +      +        F+   G ++ + + ++M  
Sbjct: 132 EFDFEPKAHWDLGEDLGILDWERGGKVTGARFL--------FYKGLGARLERAIYNFMLD 183

Query: 285 RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
              K+ Y E+ TP +++      +G +  ++ + F +   +        F L P      
Sbjct: 184 EHGKEGYTEVITPYIVNHDSMFGTGQYPKFKEDTFELSDTN--------FVLIPTAEVPL 235

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMF 401
              +   +   ++LP+        +R+E   +     GL+R+  F + +   F   E+ +
Sbjct: 236 TNYYRDEILDGKDLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESY 295

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
            E  K+     +I +       +V LST              +W  A+N  + +
Sbjct: 296 EELEKMTANAENILQKLNLPYRVVALSTGDMGFSAAKTYDLEVWIPAQNNYREI 349


>gi|298245683|ref|ZP_06969489.1| glycyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
 gi|297553164|gb|EFH87029.1| glycyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
          Length = 450

 Score = 72.1 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 59/418 (14%), Positives = 121/418 (28%), Gaps = 72/418 (17%)

Query: 270 RKGWKIFQTLISYMR---RKIKDDYEEINTPQVLDQHLWQQSGHWDSY------------ 314
             G ++   +  +      ++ D+   I    +    +W+ SGH +++            
Sbjct: 44  PLGVELRNNIRRFWWWSMVQMHDNVVGIEGANITHPRVWEASGHVENFVDILVDCKKCKR 103

Query: 315 ----------------------------RANMFAVKCADDTIKDLRTFALKPMNCPGHVA 346
                                       R N+           D     L+   C     
Sbjct: 104 RFRIDHLDPKNVEQNKCPACGGEFTEPRRFNLLMETYLGVVEGDRMKTYLRGEACQNIYL 163

Query: 347 VFNHGLKSYR-ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +++ +KS R ++P  + + G  +RNE +   + L R R F Q D   F    +M     
Sbjct: 164 DYDNVVKSSRVQIPFGICQIGKAFRNEVTPG-NFLFRQREFEQWDLQFFVHPSEMDKWFD 222

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
                    Y+     K  ++         G D L   A+              + R   
Sbjct: 223 YWKEYRFKWYQTIINHKDRLRFHEH-----GKDELAHYAKKAY---------DIEYRTIL 268

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGT--IQVDFNLPSRFNAFYVNSHSEKCHPVM- 522
           G    EG  +         D        G      D N   R+  + V +        + 
Sbjct: 269 GWQEWEGIHW-----RQDWDLSRHSQYSGQDLSYTDLNTKERYIPWIVETSGGVDRTFLN 323

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTT---ITSSAVEYAQEIANLLKSHH 579
           +    +      +G   +    +L  WL+P++  V          V  A++I   L+   
Sbjct: 324 LLLDAYEEQPDPMGKGNDRTVLHLHPWLAPVKCAVLPLQKNKEELVGVAKDIHKNLQR-- 381

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
             +      + I  + R       P  +    +   ++++ +R   S    ++ + + 
Sbjct: 382 FMVTQYDDIQNIGRRYRRQDEIGTPYCVTIDFQTLDDQTVTLRERDSMEQIRIPISEL 439


>gi|89071223|ref|ZP_01158404.1| alanyl-tRNA synthetase [Oceanicola granulosus HTCC2516]
 gi|89043236|gb|EAR49465.1| alanyl-tRNA synthetase [Oceanicola granulosus HTCC2516]
          Length = 885

 Score = 72.1 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 31/140 (22%), Positives = 62/140 (44%), Gaps = 5/140 (3%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDELAQIEKKM 126
           R      HS  H++ EA++++  +     G     D   +DF   +   +D++A +E+++
Sbjct: 556 RGAIRANHSATHLLNEALRNVLGDHVAQRGSLNAPDRLRFDFSHNKAMGADDIAAVEREV 615

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYK----VEILESIPAKENVTLYRQGEWFDL 182
            E+I +++P   + ++ ++AR L        K    V ++    A     L  +    +L
Sbjct: 616 NELIRQNAPVTTRIMTPDEARALGAQALFGEKYGDEVRVVSMGIADTGKGLDGKTYSIEL 675

Query: 183 CRGPHVRSTGQVKKFFKLMK 202
           C G HV  TG +  F    +
Sbjct: 676 CGGTHVARTGDIGLFALTTE 695


>gi|225021787|ref|ZP_03710979.1| hypothetical protein CORMATOL_01815 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224945483|gb|EEG26692.1| hypothetical protein CORMATOL_01815 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 466

 Score = 72.1 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 47/328 (14%), Positives = 104/328 (31%), Gaps = 51/328 (15%)

Query: 334 FALKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
             ++P    G    F +    +  + P  + + G  +RNE +   + + R R F Q +  
Sbjct: 163 HYMRPETAQGIFINFKNVQTTARMKPPFGIGQVGKAFRNEITPG-NFIFRTREFEQMEIE 221

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
            F +      +  +  +     + D G     ++    P+                    
Sbjct: 222 YFVSPSDAPEKFQEWVDACWDWFIDLGINPDNMRQFDVPK-------------------- 261

Query: 453 DTIKNSSQDRINTGVLLG-EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
           +   + S   I+     G  G+ +G   E +             I+      S F+    
Sbjct: 262 EERAHYSAGTIDFEYRFGFAGSEWG---ELMGVANRTDYDLGSHIKYSGEDLSYFDQVT- 317

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW----------------LSPIQA 555
               E+  P +I    FG     +  + + +  +                    L+P++ 
Sbjct: 318 ---GERYVPYVIE-PSFGLTRAMMAFLCDAYHEDEAPNAKGGVDKRTVLRLDRRLAPVKV 373

Query: 556 IVTTIT--SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
            V  ++   + +  A+ IA  L+    +I+ D     I  + R       P  +      
Sbjct: 374 AVLPLSKKDTLLPTAEAIAADLRKL-WNIDYDIAGA-IGRRYRRQDEIGTPFCVTVDFDS 431

Query: 614 ASERSIGIRRFGSTTTQKVSLLDAIPIL 641
             +RS+ +R   +   ++V++ +    L
Sbjct: 432 LEDRSVTVRERDTMAQERVAIDELPAYL 459


>gi|78212123|ref|YP_380902.1| seryl-tRNA synthetase [Synechococcus sp. CC9605]
 gi|123578699|sp|Q3AM35|SYS_SYNSC RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|78196582|gb|ABB34347.1| seryl-tRNA synthetase [Synechococcus sp. CC9605]
          Length = 425

 Score = 72.1 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 36/234 (15%), Positives = 79/234 (33%), Gaps = 20/234 (8%)

Query: 220 IYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED----GSGVIFWHRKGWKI 275
             G + +   E+ ++     +    +H ++A  + LF          S  +    +G ++
Sbjct: 117 PDGRSEDDNVEVRRWGTPRVDDGLYEHWQIAERLQLFDTERSVRIAQSRFVTLMGQGARL 176

Query: 276 FQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
            + LI++M        Y E+  P +++      SG    +    F     D         
Sbjct: 177 ERALINFMLDLHTSKGYREVLPPVLVNSASLTGSGQLPKFAEESFRCAEDD--------L 228

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDA 391
            L P       ++    +    +LP+R A +   +R E         GL+R+  F + + 
Sbjct: 229 WLTPTAEVPVTSLHRDEIIPADQLPLRYAAYSPCFRREAGSYGRDTRGLIRLHQFNKVEL 288

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST----RPEKRVGSDALW 441
           + F   +       +I     ++ +       ++ L T       +R     +W
Sbjct: 289 YWFVHPDHSDEAHQRITADAEAVLQALELPYRVLDLCTADLGFSARRTYDLEVW 342


>gi|288932487|ref|YP_003436547.1| histidyl-tRNA synthetase [Ferroglobus placidus DSM 10642]
 gi|288894735|gb|ADC66272.1| histidyl-tRNA synthetase [Ferroglobus placidus DSM 10642]
          Length = 409

 Score = 72.1 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 55/405 (13%), Positives = 119/405 (29%), Gaps = 45/405 (11%)

Query: 268 WHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADD 326
           +  +  +  + L    R  ++   Y E+ TP      L+                +    
Sbjct: 12  FLPEEMEKRRELEKIFREVVELFGYREVQTPTFEHLELFTIKS------GEEIIKEIYAF 65

Query: 327 TIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
             K  R  AL+P      + +F +   S+   P+R   F + +R E         R R F
Sbjct: 66  KDKGGRDLALRPELTAPVMRMFVNE-CSHLPKPLRFYYFSNCFRYERPQK----GRYREF 120

Query: 387 TQDDAHVF--CTKEQMFNECLKIHNLIISIYKDF----GFEKIMVK-----LSTRPEKRV 435
            Q  A +    + E      L  + ++      F    G   ++              R+
Sbjct: 121 WQFGAELIGSNSPEAEAEVILLSYRMLEKAGVSFELSIGDVNLLRYVLRDIPEKEAAMRL 180

Query: 436 GSDALWDDAENIM-----KGVLDTIKNSSQDRINTGVLLGEGAFYG-------------P 477
                ++   N++     + + +TI    +              +               
Sbjct: 181 IDKEEFETLRNLLAKYDREEIYETILQLGEIESVEEAEEVVDYDFSHLKKLCEILDALEL 240

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           K+      A G D+  GT+   +              S +   +     V G+      I
Sbjct: 241 KYFVDFTVARGLDYYTGTVFEYYAEGLGAQKQICGGGSYRLAKLFGGEDVPGTG---FAI 297

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
             +               +V      + + A +IA  L+ + + +  D     +  ++  
Sbjct: 298 GFDRVMELFTKSPKYEPPVVVVSLVESKD-AFKIAERLRENGVKVVVDVMGRNLKKQMSF 356

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +       +I G KE    +  I+   +   + +S  +A+ ++ 
Sbjct: 357 ANDISAEYAVIIGKKELESGTFSIKDLVTGKQKSLSFEEAVELIK 401


>gi|328944998|gb|EGG39155.1| serine--tRNA ligase [Streptococcus sanguinis SK1087]
          Length = 425

 Score = 72.1 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 73/193 (37%), Gaps = 16/193 (8%)

Query: 267 FWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD 325
           F+   G ++ + + ++M     K+ Y E+ TP +++      +G +  ++ + F +   +
Sbjct: 165 FYKGLGARLERAIYNFMLDEHGKEGYTEVITPYMVNHDSMFGTGQYPKFKEDTFELSDTN 224

Query: 326 DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMR 382
                   F L P         +   +   +ELP+        +R+E   +     GL+R
Sbjct: 225 --------FVLIPTAEVPLTNYYRDEILDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIR 276

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSD 438
           +  F + +   F   E+ + E  K+     +I +       +V L T             
Sbjct: 277 LHQFHKVEMVKFAKPEESYEELEKMTANAENILQKLNLPYRVVALCTGDMGFSAAKTYDL 336

Query: 439 ALWDDAENIMKGV 451
            +W  A+N  + +
Sbjct: 337 EVWIPAQNTYREI 349


>gi|298372789|ref|ZP_06982779.1| glycine--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058]
 gi|298275693|gb|EFI17244.1| glycine--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058]
          Length = 516

 Score = 72.1 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 50/324 (15%), Positives = 99/324 (30%), Gaps = 30/324 (9%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+                 L+P    G    F +  K+   ++P  +A+ G  +RNE  
Sbjct: 195 FNLMFSTEIGSVADGATKVYLRPETAQGIFVNFLNVQKTGRMKIPFGIAQIGKAFRNEIV 254

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
            +   + R+R F Q +   F     E  + +  K   +        G  K       +  
Sbjct: 255 -ARQFIFRMREFEQMEMQFFVRPGEEMKWFDYWKHFRMRWHRSLGLGDGKYRFHDHEKLA 313

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
                    + A +I   +    K        T   L +   Y  K      D    +  
Sbjct: 314 HYA------NAATDIEFEMPFGFKEVEGIHSRTDFDLSQHEKYSGKN-IKYFDPELNESY 366

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
              +        R     + +  E+       + + G   R +  +        P  L+P
Sbjct: 367 VPYVIETSIGVDRMFLSIMAASYEE-------QQLEGGDSRVVLHL--------PPVLAP 411

Query: 553 IQAIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
            +  V  +       + A E+ N+LK    ++  D ++ +I  + R       P  +   
Sbjct: 412 NKVAVLPLVKKDGLPQKAAEVMNMLKFDFKTV-YDEKD-SIGKRYRRQDAVGTPFCVTID 469

Query: 611 DKEASERSIGIRRFGSTTTQKVSL 634
            +   + ++ IR   S    +V +
Sbjct: 470 HQTLEDDTVTIRHRDSMEQSRVPV 493


>gi|167045640|gb|ABZ10289.1| putative tRNA synthetase class II core domain (G, H, P, S and T)
           [uncultured marine microorganism HF4000_APKG10K24]
          Length = 439

 Score = 72.1 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 59/426 (13%), Positives = 130/426 (30%), Gaps = 76/426 (17%)

Query: 270 RKGWKIFQTLISYMRRKI---KDDYEEINTPQVLDQHLWQQSGHWDSY-------RANMF 319
             G ++ + +     R +   +DD   ++   ++D  +W  SGH +++       R+   
Sbjct: 32  PLGVELKRNVKEAWWRSVILERDDMVGLDAAILMDPKVWVASGHVENFSDPLVQCRSCNM 91

Query: 320 AVKCADDTIK----------DLRTFA------------------LKPMNCPGHVAVFNHG 351
             +  D T +          D R F                   ++P    G    F + 
Sbjct: 92  RFRTDDLTSEACPSCGGELADPRQFNLMFKTFMGPVEDTASEIWMRPETAQGIFVNFPNV 151

Query: 352 LKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
           + S  ++LP  + + G  +RNE +   +   R R F Q +   F                
Sbjct: 152 VNSTRKKLPFGIGQIGKAFRNEITPG-NFTFRTREFEQMEIEFFVKPGTDEEWLQTWVQE 210

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
               Y   G          R   R+      + A        D      +       L G
Sbjct: 211 RFDWYVAHGI--------RRENLRLRKHESNELAHY----AKDCYDIEYRFPWGWAELEG 258

Query: 471 EGAFYGPKFEYILK---DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHR-- 525
             +    + ++ L+   +A G+D       V+     R+  + +         V+     
Sbjct: 259 IAS----RTDFDLRQHQEASGQDMTYFDDSVEEGQDQRYLPYVIEPSGGVDRAVLAFWLD 314

Query: 526 ------AVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT--SSAVEYAQEIANLLKS 577
                          + +++   +      L+P+      ++        A+E+   L+ 
Sbjct: 315 SYDEEPDPASKSSDAVRVVLHLHRE-----LAPVTVAALPLSRNEKLTPTAREVYAKLRK 369

Query: 578 HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
           H  + + D   ++I  + R       P  +        +  + IR   + +  ++ + D 
Sbjct: 370 H-FNTQYDD-AQSIGRRYRRQDEIGTPYCVTIDFDTLEDHQVTIRDRDTMSQSRIPITDL 427

Query: 638 IPILTK 643
           + +L  
Sbjct: 428 VDVLKD 433


>gi|168485545|ref|ZP_02710053.1| seryl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00]
 gi|183571170|gb|EDT91698.1| seryl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00]
          Length = 424

 Score = 72.1 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 51/354 (14%), Positives = 115/354 (32%), Gaps = 51/354 (14%)

Query: 120 AQIEKKMQEIIARDSPF---------LKQYLSHEKARELFESKKEAYKVEILESIPA--- 167
           A +  +M+EI A+              +  +S E A+     +    K+  ++++ A   
Sbjct: 25  AAVLNEMKEIDAKRRNILVKVETLKAERNTVSAEIAQAKRNKENTDDKIAAMQNLSAEVK 84

Query: 168 --KENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAW 225
                +              P++ +        +   V    W             GT  
Sbjct: 85  ALDAELAEIDAKLTEFTTTLPNIPADSVPVGADEDDNVEVRRW-------------GTPR 131

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYM-R 284
               E   +    E+    D  +  +      +        F+   G ++ + + ++M  
Sbjct: 132 EFDFEPKAHWDLGEDLGILDWERGGKVTGARFL--------FYKGLGARLERAIYNFMLD 183

Query: 285 RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
              K+ Y E+ TP +++      +G +  ++ + F +   +        F L P      
Sbjct: 184 EHGKEGYTEVITPYIVNHDSMFGTGQYPKFKEDTFELSDTN--------FVLIPTAEVPL 235

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMF 401
              +   +   ++LP+        +R+E   +     GL+R+  F + +   F   E+ +
Sbjct: 236 TNYYRDEILDGKDLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESY 295

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
            E  K+     +I +       +V LST              +W  A+N  + +
Sbjct: 296 EELEKMTANAENILQKLNLPYRVVALSTGDMGFSAAKTYDLEVWIPAQNNYREI 349


>gi|149012162|ref|ZP_01833271.1| seryl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
 gi|303255391|ref|ZP_07341457.1| seryl-tRNA synthetase [Streptococcus pneumoniae BS455]
 gi|303259488|ref|ZP_07345465.1| seryl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
 gi|303262351|ref|ZP_07348294.1| seryl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
 gi|303264769|ref|ZP_07350686.1| seryl-tRNA synthetase [Streptococcus pneumoniae BS397]
 gi|303266608|ref|ZP_07352493.1| seryl-tRNA synthetase [Streptococcus pneumoniae BS457]
 gi|303268841|ref|ZP_07354628.1| seryl-tRNA synthetase [Streptococcus pneumoniae BS458]
 gi|147763764|gb|EDK70698.1| seryl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
 gi|301801323|emb|CBW34006.1| seryl-tRNA synthetase [Streptococcus pneumoniae INV200]
 gi|302597636|gb|EFL64716.1| seryl-tRNA synthetase [Streptococcus pneumoniae BS455]
 gi|302636450|gb|EFL66942.1| seryl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
 gi|302639422|gb|EFL69880.1| seryl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
 gi|302641622|gb|EFL71982.1| seryl-tRNA synthetase [Streptococcus pneumoniae BS458]
 gi|302643852|gb|EFL74114.1| seryl-tRNA synthetase [Streptococcus pneumoniae BS457]
 gi|302645636|gb|EFL75866.1| seryl-tRNA synthetase [Streptococcus pneumoniae BS397]
          Length = 424

 Score = 72.1 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 51/354 (14%), Positives = 115/354 (32%), Gaps = 51/354 (14%)

Query: 120 AQIEKKMQEIIARDSPF---------LKQYLSHEKARELFESKKEAYKVEILESIPA--- 167
           A +  +M+EI A+              +  +S E A+     +    K+  ++++ A   
Sbjct: 25  AAVLNEMKEIDAKRRNILIKVETLKAERNTVSAEIAQAKRNKENTDDKIAAMQNLSAEVK 84

Query: 168 --KENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAW 225
                +              P++ +        +   V    W             GT  
Sbjct: 85  ALDAELAEIDAKLTEFTTTLPNIPADSVPVGADEDDNVEVRRW-------------GTPR 131

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYM-R 284
               E   +    E+    D  +  +      +        F+   G ++ + + ++M  
Sbjct: 132 EFDFEPKAHWDLGEDLGILDWERGGKVTGARFL--------FYKGLGARLERAIYNFMLD 183

Query: 285 RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
              K+ Y E+ TP +++      +G +  ++ + F +   +        F L P      
Sbjct: 184 EHGKEGYTEVITPYIVNHDSMFGTGQYPKFKEDTFELSDTN--------FVLIPTAEVPL 235

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMF 401
              +   +   ++LP+        +R+E   +     GL+R+  F + +   F   E+ +
Sbjct: 236 TNYYRDEILDGKDLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESY 295

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
            E  K+     +I +       +V LST              +W  A+N  + +
Sbjct: 296 EELEKMTANAENILQKLNLPYRVVALSTGDMGFSAAKTYDLEVWIPAQNNYREI 349


>gi|325268781|ref|ZP_08135407.1| glycyl-tRNA synthetase beta subunit [Prevotella multiformis DSM
           16608]
 gi|324988886|gb|EGC20843.1| glycyl-tRNA synthetase beta subunit [Prevotella multiformis DSM
           16608]
          Length = 515

 Score = 72.1 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 60/348 (17%), Positives = 115/348 (33%), Gaps = 60/348 (17%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        + +      L+P    G    F +  K+   +LP  + + G  +RNE  
Sbjct: 194 FNLMFSTEVGASAEATNKIYLRPETAQGIFVNFLNVQKTGRMKLPFGICQIGKAFRNEIV 253

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
            +   + R+R F Q +   FC    E  + E  K H L        G E        +  
Sbjct: 254 -ARQFVFRMREFEQMEMQFFCQPGTEMKWFEYWKKHRLAWHEALGMGDENYRFHDHEKLA 312

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
                    + A +I            +  +  G    EG      F+      + +  +
Sbjct: 313 HYA------NAATDI------------EFHMPFGFKEVEGIHSRTDFD------LSQHEK 348

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK--------- 543
               Q+ +  P R         +E   P  +  ++ G    F+ +M  ++          
Sbjct: 349 FSGRQIKYFDPER---------NESYTPYDVETSI-GVDRMFLSVMCHSYTEEQLENGSS 398

Query: 544 ---GNLPLWLSPIQAIVTTITSSAV--EYAQEIANLLKSH---HLSIETDFRNETINYKI 595
                LP  L+P++  V  + +     E A+EI N LK H   H+  +     ++I  + 
Sbjct: 399 RIVLKLPEPLAPVKCAVLPLVNKDGLPEKAREIVNSLKFHFNTHMEAK-----DSIGKRY 453

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           R       P  +       ++ ++ +R   S   ++V +     I+  
Sbjct: 454 RRQDAIGTPFCVTVDGDTLNDNTVTLRYRDSMKQERVPVEKLREIIED 501


>gi|315604760|ref|ZP_07879823.1| glycyl-tRNA synthetase beta subunit [Actinomyces sp. oral taxon 180
           str. F0310]
 gi|315313772|gb|EFU61826.1| glycyl-tRNA synthetase beta subunit [Actinomyces sp. oral taxon 180
           str. F0310]
          Length = 475

 Score = 72.1 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 57/324 (17%), Positives = 105/324 (32%), Gaps = 39/324 (12%)

Query: 334 FALKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
             L+P    G    + +    + ++ P  + + G  +RNE +   + + R R F Q +  
Sbjct: 173 HYLRPETAQGIFVNYANVMNAARKKPPFGIGQIGKSFRNEITPG-NFIFRTREFEQMELE 231

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
            FC             +   + Y D G +   ++    P+         +   +  K  +
Sbjct: 232 FFCEPGTDEEWHQYWIDYRKAWYVDLGIDPENLREYEHPQ---------EKLSHYSKRTV 282

Query: 453 DTIKNSSQDRINTGVLLGEG--AFY---------GPKFEYILKDAIGRDWQCGTIQVDFN 501
           D            G L G      Y         G K +Y    +    W    I+    
Sbjct: 283 DLEYRFGFQGGQWGELEGIANRTDYDLTVHSEASGAKLDY-FDPSTKERWTPYVIEPSAG 341

Query: 502 LPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT 561
           L     AF + ++ E   P        G  +R +          L   L+P++A V  ++
Sbjct: 342 LTRSLMAFLIEAYHEDEAPNAKG----GVDKRVV--------LKLDPRLAPVKAAVLPLS 389

Query: 562 --SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSI 619
                   AQE+A+ L+    +I+ D     +  + R       P  I        +R++
Sbjct: 390 RKPELTGPAQELADQLRGL-WNIDYDDAGA-VGRRYRRQDEIGTPYCITYDFDSVEDRAV 447

Query: 620 GIRRFGSTTTQKVSLLDAIPILTK 643
            IR   S    ++ L      L +
Sbjct: 448 TIRERDSMQQVRIPLEGVKSYLVE 471


>gi|42522689|ref|NP_968069.1| glycyl-tRNA synthetase [Bdellovibrio bacteriovorus HD100]
 gi|59798543|sp|Q6MNT9|SYG_BDEBA RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|39573885|emb|CAE79062.1| glycyl-tRNA synthetase [Bdellovibrio bacteriovorus HD100]
          Length = 446

 Score = 72.1 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 49/369 (13%), Positives = 115/369 (31%), Gaps = 60/369 (16%)

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH-G 351
           E   P    ++L ++      ++ +M  ++ +   +       L+P    GH   F +  
Sbjct: 111 EKKCPNCGSKNLSEERSFNLMFKTHMGPLEDSGSVV------YLRPETAQGHFVNFQNCQ 164

Query: 352 LKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI 411
             S  ++P  +A  G  +RNE +   + + R R F Q +   F           +     
Sbjct: 165 QASRYKIPFGIAAIGKSFRNEITPG-NFIFRTREFEQMEMQYFVEPGTDEQFFKEWKERR 223

Query: 412 ISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
            + Y  FG +   +K               D   +  K  +D      + +   G    E
Sbjct: 224 WNFYIKFGIKPENLKFKDH-----------DKLAHYAKAAVDV-----EFKFPMGFSELE 267

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
           G      F+                       S  N  Y +  ++K +   +     G  
Sbjct: 268 GIHNRSDFDL----------------SQHMKFSGKNLEYFDEPNKKKYIPYVIETAVGCD 311

Query: 532 ERFIGIMIE--------NFKGNLP--------LWLSPIQAIVTTIT--SSAVEYAQEIAN 573
             F+  + +        +  G             ++P +  V  ++        ++++ +
Sbjct: 312 RLFLAFLCDAYREEVTTDEAGKEDVRVVMGLHPEIAPFKVAVLPLSKKEELSSISEKLRD 371

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            L +    +  D   ++I  + R       P  +       +++++ +R     T ++V+
Sbjct: 372 QL-AEDFDVNYDES-QSIGKRYRRQDEIGTPFCVTVDFDTINDQAVTVRHRDKMTQERVA 429

Query: 634 LLDAIPILT 642
           +      + 
Sbjct: 430 ITQLNAYIA 438


>gi|170782097|ref|YP_001710430.1| glycyl-tRNA synthetase [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|169156666|emb|CAQ01824.1| glycyl-tRNA synthetase [Clavibacter michiganensis subsp.
           sepedonicus]
          Length = 461

 Score = 72.1 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 48/328 (14%), Positives = 104/328 (31%), Gaps = 49/328 (14%)

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELP-VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
             L+P    G    F + L + R+ P   + + G  +RNE +   + + R R F Q +  
Sbjct: 158 HYLRPETAQGIFVNFANVLSAARQKPPFGIGQIGKSFRNEITPQ-NWIFRTREFEQMEME 216

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
            F              +   + Y D G +   ++L   P                     
Sbjct: 217 FFVEPGTDAEWHQYWIDARYAWYTDLGIDPENLRLFEHP------------------AAK 258

Query: 453 DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
            +  ++    I        GA +G      L+    R               +  +++  
Sbjct: 259 LSHYSTRTVDIEYRFGFAGGA-WG-----ELEGIANRTDYDLRTHS--EASGQDLSYFDQ 310

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW----------------LSPIQAI 556
           + +E+  P +I     G     +  +++ +  +                    L+P++  
Sbjct: 311 TKNERWIPYVIE-PAAGLTRSMMAFLVDAYHEDEAPNAKGGVDKRTVLRLDRRLAPVKVA 369

Query: 557 VTTIT--SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
           V  ++        A+E+A  L+    +IE D     I  + R       P  +       
Sbjct: 370 VLPLSRNEKLSPVARELAAELRKI-WNIEFDDAGA-IGRRYRRQDEIGTPFCVTIDFDTL 427

Query: 615 SERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +R++ +R   +   +++ L + +  L 
Sbjct: 428 DDRAVTVRERDTMAQERIPLDELVGYLA 455


>gi|307102784|gb|EFN51052.1| hypothetical protein CHLNCDRAFT_141561 [Chlorella variabilis]
          Length = 641

 Score = 72.1 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/222 (14%), Positives = 80/222 (36%), Gaps = 16/222 (7%)

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
           D     +++  S    +R G+    + A+ +++   +  ++ +   +  G     G   G
Sbjct: 300 DLDNPGLLLHESHAAHERQGTAE--EHAQAMIELYGELCRDIAGLPVVVGRRPASGTLSG 357

Query: 477 PKFEYILKDAIG--RDWQCGTIQVDFNLPSRF--NAFYVNSHSEKCHPVMIHRAVFGSIE 532
               Y ++  +G  R  Q        +  SR    ++  ++  ++     + +   G   
Sbjct: 358 AAASYTVEAMVGAGRALQVAQSHHLADNYSRALGASYSTSAEQQEWGGEFMSQMGSGLRA 417

Query: 533 RFIGIMI----ENFKGNLPLWLSPIQAIVTTI------TSSAVEYAQEIANLLKSHHLSI 582
             +G +     ++    LP  L+P+Q ++T +           + A+ +   L +  + +
Sbjct: 418 SLLGGVTLAHGDDAGLALPPTLAPVQVVITPVLTRSCNRQGLADEAERVRAALAAAGVRV 477

Query: 583 ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRF 624
             D R      + R       P+ I  G ++   RS  + R 
Sbjct: 478 AVDNRRLKPAVRFRASEQLGAPLRIEIGPQDIKARSCVVARR 519


>gi|332364654|gb|EGJ42423.1| serine--tRNA ligase [Streptococcus sanguinis SK1059]
          Length = 425

 Score = 72.1 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 73/193 (37%), Gaps = 16/193 (8%)

Query: 267 FWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD 325
           F+   G ++ + + ++M     K+ Y E+ TP +++      +G +  ++ + F +   +
Sbjct: 165 FYKGLGARLERAIYNFMLDEHGKEGYTEVITPYMVNHDSMFGTGQYPKFKEDTFELSDTN 224

Query: 326 DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMR 382
                   F L P         +   +   +ELP+        +R+E   +     GL+R
Sbjct: 225 --------FVLIPTAEVPLTNYYRDEILDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIR 276

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSD 438
           +  F + +   F   E+ + E  K+     +I +       +V L T             
Sbjct: 277 LHQFHKVEMVKFAKPEESYEELEKMTANAENILQKLNLPYRVVALCTGDMGFSAAKTYDL 336

Query: 439 ALWDDAENIMKGV 451
            +W  A+N  + +
Sbjct: 337 EVWIPAQNTYREI 349


>gi|324994145|gb|EGC26059.1| serine--tRNA ligase [Streptococcus sanguinis SK678]
          Length = 425

 Score = 72.1 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 73/193 (37%), Gaps = 16/193 (8%)

Query: 267 FWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD 325
           F+   G ++ + + ++M     K+ Y E+ TP +++      +G +  ++ + F +   +
Sbjct: 165 FYKGLGARLERAIYNFMLDEHGKEGYTEVITPYMVNHDSMFGTGQYPKFKEDTFELSDTN 224

Query: 326 DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMR 382
                   F L P         +   +   +ELP+        +R+E   +     GL+R
Sbjct: 225 --------FVLIPTAEVPLTNYYRDEILDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIR 276

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSD 438
           +  F + +   F   E+ + E  K+     +I +       +V L T             
Sbjct: 277 LHQFHKVEMVKFAKPEESYEELEKMTANAENILQKLNLPYRVVALCTGDMGFSAAKTYDL 336

Query: 439 ALWDDAENIMKGV 451
            +W  A+N  + +
Sbjct: 337 EVWIPAQNTYREI 349


>gi|324992052|gb|EGC23974.1| serine--tRNA ligase [Streptococcus sanguinis SK405]
 gi|325697635|gb|EGD39520.1| serine--tRNA ligase [Streptococcus sanguinis SK160]
 gi|327459354|gb|EGF05700.1| serine--tRNA ligase [Streptococcus sanguinis SK1]
 gi|327490570|gb|EGF22351.1| serine--tRNA ligase [Streptococcus sanguinis SK1058]
          Length = 425

 Score = 72.1 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 73/193 (37%), Gaps = 16/193 (8%)

Query: 267 FWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD 325
           F+   G ++ + + ++M     K+ Y E+ TP +++      +G +  ++ + F +   +
Sbjct: 165 FYKGLGARLERAIYNFMLDEHGKEGYTEVITPYMVNHDSMFGTGQYPKFKEDTFELSDTN 224

Query: 326 DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMR 382
                   F L P         +   +   +ELP+        +R+E   +     GL+R
Sbjct: 225 --------FVLIPTAEVPLTNYYRDEILDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIR 276

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSD 438
           +  F + +   F   E+ + E  K+     +I +       +V L T             
Sbjct: 277 LHQFHKVEMVKFAKPEESYEELEKMTANAENILQKLNLPYRVVALCTGDMGFSAAKTYDL 336

Query: 439 ALWDDAENIMKGV 451
            +W  A+N  + +
Sbjct: 337 EVWIPAQNTYREI 349


>gi|323350377|ref|ZP_08086041.1| serine--tRNA ligase [Streptococcus sanguinis VMC66]
 gi|322123450|gb|EFX95126.1| serine--tRNA ligase [Streptococcus sanguinis VMC66]
          Length = 425

 Score = 72.1 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 73/193 (37%), Gaps = 16/193 (8%)

Query: 267 FWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD 325
           F+   G ++ + + ++M     K+ Y E+ TP +++      +G +  ++ + F +   +
Sbjct: 165 FYKGLGARLERAIYNFMLDEHGKEGYTEVITPYMVNHDSMFGTGQYPKFKEDTFELSDTN 224

Query: 326 DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMR 382
                   F L P         +   +   +ELP+        +R+E   +     GL+R
Sbjct: 225 --------FVLIPTAEVPLTNYYRDEILDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIR 276

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSD 438
           +  F + +   F   E+ + E  K+     +I +       +V L T             
Sbjct: 277 LHQFHKVEMVKFAKPEESYEELEKMTANAENILQKLNLPYRVVALCTGDMGFSAAKTYDL 336

Query: 439 ALWDDAENIMKGV 451
            +W  A+N  + +
Sbjct: 337 EVWIPAQNTYREI 349


>gi|16079810|ref|NP_390634.1| histidyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221310694|ref|ZP_03592541.1| histidyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221315018|ref|ZP_03596823.1| histidyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           NCIB 3610]
 gi|221319939|ref|ZP_03601233.1| histidyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           JH642]
 gi|221324220|ref|ZP_03605514.1| histidyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           SMY]
 gi|3122900|sp|O32039|SYH_BACSU RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|2635220|emb|CAB14715.1| histidyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
          Length = 424

 Score = 72.1 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 70/411 (17%), Positives = 139/411 (33%), Gaps = 55/411 (13%)

Query: 276 FQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           +Q +   MR   +   Y+EI TP        +          ++   +      +  R+ 
Sbjct: 20  WQFVEQIMRDTCRTYQYKEIRTPIF---EHTELFARGVGESTDIVQKEMYTFEDRKGRSL 76

Query: 335 ALKPMNCPGHVAVFNHGLKSYREL-PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
            L+P      V  FN        + P +L   G ++R E   +     R R F Q     
Sbjct: 77  TLRPEGTAAAVRAFNENKLFANPVQPTKLYYVGPMFRYERPQT----GRYRQFYQFGIEA 132

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKI---MVKLSTRPEKRVGSDALWDDAENIMKG 450
             +K+   +   ++  L +SIY+  G E +   +  L  +  ++   +AL    E  ++ 
Sbjct: 133 IGSKDPAIDA--EVMALAMSIYEKAGLENVKLVINSLGDQDSRKSYREALVKHFEPRIEE 190

Query: 451 ---------------VLDTIKNSSQD------RINTGVLLGEGAFY----------GPKF 479
                          +LD  K+   +       I T +     A++          G  +
Sbjct: 191 FCSDCQSRLHTNPLRILDCKKDRDHELMKSAPSILTYLNEESAAYFEKVKQYLNDLGISY 250

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK--------CHPVMIHRAVFGSI 531
           E       G D+   T     +    F A    +   +          P         SI
Sbjct: 251 EIDPNLVRGLDYYNHTAFEIMSNAEGFGAITTLAGGGRYDGLVEQIGGPEAPGIGFAMSI 310

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           ER +  +  + +         I   + T+   A +Y+  +   L+   +S E D+ N+ +
Sbjct: 311 ERLLAAI--DAEKRELPVDKGIDCYIVTLGEKAKDYSVSLVYKLREAGISSEIDYENKKM 368

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             + +     K   I I G+ E ++  I ++   +    +V+L + I ++ 
Sbjct: 369 KGQFKTADRLKARFIAILGEDELAQNKINVKDAQTGEQIEVALDEFIHVMK 419


>gi|193211698|ref|YP_001997651.1| glycyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327]
 gi|193085175|gb|ACF10451.1| glycyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327]
          Length = 489

 Score = 72.1 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 44/342 (12%), Positives = 98/342 (28%), Gaps = 50/342 (14%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPS 374
            N+                 L+P    G    F++    S  ++P  +A+ G  +RNE  
Sbjct: 179 FNLMFQCNMGAIAGSGGVVYLRPETAQGIFVNFHNVREASRMKVPFGIAQIGKAFRNEIV 238

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY-KDFGFEKIMVKLSTRPEK 433
              + + R+  F Q +   F                    Y +  G  K  +      + 
Sbjct: 239 KG-NFIFRMVEFEQMEMQYFVKPGTQLEAFEAWREERFRWYSETLGMTKEKLHWYKHDKL 297

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
              +D  +D                 +     G    EG      F+             
Sbjct: 298 AHYADLAYDI----------------KFEFPFGTEEIEGIHSRTDFD------------- 328

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK---------- 543
             +        +   +   + +E+  P ++  +  G    F+ ++ + ++          
Sbjct: 329 --LTQHQEYSGKSMEYIDQTTNERYIPYVVETSS-GCDRTFLALLSDAYQEDVVDGEPRV 385

Query: 544 -GNLPLWLSPIQAIVTTITS--SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              L   ++P++A V  +       E A+++   L      ++ D    +I  + R    
Sbjct: 386 MLKLAPKVAPVKAAVLPLMKKGEMAEKARQLCAALSES-FMVQYDDAA-SIGKRYRRQDE 443

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
              P             +I +R   +   +++ +  A   L 
Sbjct: 444 IGTPFCFTVDHDTLENGTITVRYRDTAAQERIEMSKAAEFLA 485


>gi|282880410|ref|ZP_06289121.1| glycine--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
 gi|281305766|gb|EFA97815.1| glycine--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
          Length = 514

 Score = 72.1 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 53/345 (15%), Positives = 110/345 (31%), Gaps = 54/345 (15%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+                 L+P    G    + +  K+   +LP  +A+ G  +RNE  
Sbjct: 194 FNLMFSTEMGSLSDATNKIYLRPETAQGIFVNYLNVQKTGRMKLPFGIAQIGKAFRNEIV 253

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
            +   + R+R F Q +   F     E  + +  K   +       FG E        +  
Sbjct: 254 -ARQFIFRMREFEQMEMQFFVKPGTELEWFKRWKELRMAWHQALGFGAENYRFHDHEKLA 312

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
                    + A +I            + ++  G    EG      F+            
Sbjct: 313 HYA------NAATDI------------EFKMPFGFKEVEGVHSRTNFD------------ 342

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK--------- 543
              +        +   ++    +E   P +I  ++ G    F+ +M  +++         
Sbjct: 343 ---LSQHEKFSGKSIKYFDPETNESYVPYVIETSI-GVDRMFLSVMCHSYQEEELEGGDK 398

Query: 544 ---GNLPLWLSPIQAIVTTITSSAV--EYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
                LP  L+P++  V  +       E A+EI NLLK  H +   D ++ +I  + R  
Sbjct: 399 RIVLRLPAALAPVKCAVMPLVRKEGLPEKAREIVNLLK-FHFNTSYDEKD-SIGKRYRRQ 456

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
                P  +        +  + +R   +   +++ + +    +  
Sbjct: 457 DAVGTPYCVTVDFDTLKDNKVTLRHRDTMQQERIDISELCAHIED 501


>gi|76798465|ref|ZP_00780702.1| seryl-tRNA synthetase [Streptococcus agalactiae 18RS21]
 gi|76799387|ref|ZP_00781541.1| seryl-tRNA synthetase [Streptococcus agalactiae 18RS21]
 gi|76585255|gb|EAO61859.1| seryl-tRNA synthetase [Streptococcus agalactiae 18RS21]
 gi|76586166|gb|EAO62687.1| seryl-tRNA synthetase [Streptococcus agalactiae 18RS21]
          Length = 381

 Score = 72.1 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 75/199 (37%), Gaps = 16/199 (8%)

Query: 261 DGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMF 319
            GS  +F+   G ++ + + S+M     K+ Y E+  P +++      +G +  ++ + F
Sbjct: 115 TGSRFLFYKGLGARLERAIYSFMLDEHAKEGYTEVIPPYMVNHDSMFGTGQYPKFKEDTF 174

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS--- 376
            +  +         F L P         +   +   +ELP+        +R+E   +   
Sbjct: 175 ELADS--------PFVLIPTAEVPLTNYYRDEIIDGKELPIYFTAMSPSFRSEAGSAGRD 226

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR-- 434
             GL+R+  F + +   F   E+ + E  K+     +I +       ++ L T       
Sbjct: 227 TRGLIRLHQFHKVEMVKFAKPEESYQELEKMTANAENILQKLNLPYRVITLCTGDMGFSA 286

Query: 435 --VGSDALWDDAENIMKGV 451
                  +W  A+N  + +
Sbjct: 287 AKTYDLEVWIPAQNTYREI 305


>gi|293381923|ref|ZP_06627889.1| seryl-tRNA synthetase [Lactobacillus crispatus 214-1]
 gi|290921510|gb|EFD98546.1| seryl-tRNA synthetase [Lactobacillus crispatus 214-1]
          Length = 435

 Score = 72.1 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 77/188 (40%), Gaps = 9/188 (4%)

Query: 272 GWKIFQTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G  + + + ++ +    K+ Y EI  P +++    Q +G +  +  +++ +   DD  K 
Sbjct: 170 GALLERAVFNFFLDENTKEGYTEIIPPYLVNDASMQGTGQFPKFHEDVYTIVDNDDPDKP 229

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFT 387
            R   L P      V  F + +    +LP+ +      +R+E   +     GL+R+  F 
Sbjct: 230 -RDLTLIPTAEVPLVNYFRNEIIHENKLPINVTALSPAFRSEAGSAGRDTRGLIRMHEFR 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +    C  ++ ++E  K+ +    + +  G    +V LST              +W  
Sbjct: 289 KVEMVKVCEPDESWDELEKLTHNAEHLLQKLGLPYHVVALSTGDASFTSAKTYDLEVWMP 348

Query: 444 AENIMKGV 451
           A++  + +
Sbjct: 349 AQDKYREI 356


>gi|321468239|gb|EFX79225.1| hypothetical protein DAPPUDRAFT_245239 [Daphnia pulex]
          Length = 66

 Score = 71.7 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 26/53 (49%)

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +N KIR   + +   I++ G+KE +  ++ IR   +    + ++   I   T+
Sbjct: 1   MNKKIRNGQLSQHNFILVVGEKEQTNGTVNIRTRDNKVHGEHTIAKVIERFTQ 53


>gi|239931399|ref|ZP_04688352.1| glycyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
 gi|291439772|ref|ZP_06579162.1| glycyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
 gi|291342667|gb|EFE69623.1| glycyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
          Length = 460

 Score = 71.7 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 48/334 (14%), Positives = 98/334 (29%), Gaps = 49/334 (14%)

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
                T        L+P    G    F      S R+ P  +A+ G  +RNE +   + +
Sbjct: 145 THLGPTQDSGSIAYLRPETAQGIFTNFAQVQTTSRRKPPFGIAQMGKSFRNEITPG-NFI 203

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            R R F Q +   F    +             + Y   G  +  ++    P+        
Sbjct: 204 FRTREFEQMEMEFFVKPGEDEKWQEYWMEQRWNWYTGLGLREENMRWYEHPQ-------- 255

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDF 500
            +   +  K   D            G L G       + ++ L             +   
Sbjct: 256 -EKLSHYSKRTADIEYRFQFGGSEWGELEGVAN----RTDFDL---------GAHSKASG 301

Query: 501 NLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW----------- 549
              S F+        E+  P +I     G     +  +++ +  +               
Sbjct: 302 QDLSYFD----QEAGERWTPYVIE-PAAGVGRAMLAFLLDAYVEDEAPNAKGKLEKRTVL 356

Query: 550 -----LSPIQAIVTTIT--SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
                L+P++  V  ++        A+ +A  L+  + +IE D     I  + R      
Sbjct: 357 RLDHRLAPVKVAVLPLSRNPELSPKAKGLAQALR-QNWNIEFDDAGA-IGRRYRRQDEIG 414

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
            P  +        + ++ +R   +   +++SL  
Sbjct: 415 TPFCVTVDFDTLDDNAVTVRERDTMKQERISLDQ 448


>gi|148272762|ref|YP_001222323.1| glycyl-tRNA synthetase [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|147830692|emb|CAN01632.1| glycyl-tRNA synthetase [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
          Length = 461

 Score = 71.7 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 62/480 (12%), Positives = 136/480 (28%), Gaps = 121/480 (25%)

Query: 246 HRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEIN---TPQVLDQ 302
            ++         I         +   G  + + +     + + +  +++    +  +L +
Sbjct: 14  AKRRGFVFQAGEIYGGSRSAWDYGPLGVALKENIKRQWWQTMVNGRDDVVGLDSSVILPR 73

Query: 303 HLWQQSGHWD--------------SYRAN-----------------MFAVKCAD------ 325
            +W+ SGH +               YRA+                 +  VK  D      
Sbjct: 74  RVWEASGHVEVFSDPLVESLHTHKRYRADHLLEAYEAKHGHPPVNGLADVKDPDTGQPGS 133

Query: 326 ----------------DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP-VRLAEFGSV 368
                                     L+P    G    F + L + R+ P   + + G  
Sbjct: 134 WTEPQNFSGLLKTFLGPVDNQEGMHYLRPETAQGIFVNFANVLSAARQKPPFGIGQIGKS 193

Query: 369 YRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLS 428
           +RNE +   + + R R F Q +   F              +   + Y D G +   ++L 
Sbjct: 194 FRNEITPQ-NWIFRTREFEQMEMEFFVEPGTDAEWHQYWIDARYAWYTDLGIDPENLRLF 252

Query: 429 TRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIG 488
             P                     + + + S   ++     G               A G
Sbjct: 253 EHP--------------------AEKLSHYSTRTVDIEYRFGF--------------AGG 278

Query: 489 RDWQCGTIQVDFNLPSRFNAFYVNSH--------SEKCHPVMIHRAVFGSIERFIGIMIE 540
              +   I    +   R ++              +E+  P +I     G     +  +++
Sbjct: 279 AWGELEGIANRTDYDLRTHSEASGQDLSYFDQTKNERWIPYVIE-PAAGLTRSMMAFLVD 337

Query: 541 NFKGNLPLW----------------LSPIQAIVTTIT--SSAVEYAQEIANLLKSHHLSI 582
            +  +                    L+P++  V  ++        A+E+A  L+    +I
Sbjct: 338 AYHEDEAPNAKGGVDKRTVLRLDRRLAPVKVAVLPLSRNEKLSPVARELAAELRKV-WNI 396

Query: 583 ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           E D     I  + R       P  +        +R++ +R   +   +++ L D +  L 
Sbjct: 397 EFDDAGA-IGRRYRRQDEIGTPFCVTVDFDTLDDRAVTVRERDTMAQERIPLDDLMGYLA 455


>gi|154287788|ref|XP_001544689.1| predicted protein [Ajellomyces capsulatus NAm1]
 gi|150408330|gb|EDN03871.1| predicted protein [Ajellomyces capsulatus NAm1]
          Length = 523

 Score = 71.7 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 43/112 (38%), Gaps = 4/112 (3%)

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
           +      K      +    F L P +     ++    + SY++LP+R+ +    YR+EP 
Sbjct: 11  KLERLVDKHMRTLDRKKARFLLAPTHEEEITSLVAGVMNSYKDLPLRVYQISRKYRDEPR 70

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK 426
               GL+R R F   D + F   +      +K +N +   Y     E  +  
Sbjct: 71  PR-QGLLRGREFIMKDLYTF---DYNAEMAIKTYNAVKETYVRLFDELRIPY 118



 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 56/138 (40%), Gaps = 8/138 (5%)

Query: 507 NAFYVNSHSEKCHPVMIHRAVFGSIERFIGI---MIENFKGNLPLWLSPIQAIVTTITSS 563
           N    N +S    P+ +     G       I   +  +   N P  ++P +A++      
Sbjct: 376 NDSKANDNSTFSVPLQMGCHGIGVSRMISAIADSLANSKGLNWPRAIAPFEAMIIPD-KG 434

Query: 564 AVEYAQEIANLLKSHHLSIE---TDFRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
             E A+++ + +   ++       D R++ + +K+R+  +   P+II+ G     E  + 
Sbjct: 435 LEEEAEKVYDAISRINIDAVDAIIDDRDKNLAWKLRDADLIGYPVIIVVGKSWRMENKLE 494

Query: 621 IR-RFGSTTTQKVSLLDA 637
           ++    +   + VSL D 
Sbjct: 495 VQCHRLNNLRETVSLPDL 512


>gi|118618885|ref|YP_907217.1| glycyl-tRNA synthetase [Mycobacterium ulcerans Agy99]
 gi|118570995|gb|ABL05746.1| glycyl-tRNA synthetase GlyS [Mycobacterium ulcerans Agy99]
          Length = 459

 Score = 71.7 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 56/356 (15%), Positives = 110/356 (30%), Gaps = 50/356 (14%)

Query: 307 QSGHWDS-YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAE 364
           + G W      NM           +     L+P    G    F + L  S ++ P  + +
Sbjct: 128 EPGQWTEPREFNMMLKTYLGPIETEEGLHYLRPETAQGIFVNFANVLTTSRKKPPFGIGQ 187

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
            G  +RNE +   + + R R F Q +   F              +  +  Y D G +   
Sbjct: 188 IGKSFRNEITPG-NFIFRTREFEQMEMEFFVEPSTAKEWHQYWIDTRLQWYVDLGIDAEN 246

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           ++L   P+         +   +     +D            G L G            + 
Sbjct: 247 LRLFEHPK---------EKLSHYSDRTVDIEYKFGFVGNPWGELEG------------VA 285

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----E 540
           +    D    +      L      FY      +  P +I     G    F+  +I    E
Sbjct: 286 NRTDFDLSTHSKHSGTELS-----FYDQVEDVRYTPYVIE-PAAGLTRSFMAFLIDAYTE 339

Query: 541 NFKGN------------LPLWLSPIQAIVTTIT--SSAVEYAQEIANLLKSHHLSIETDF 586
           +   N            L   L+P++A V  ++  +     A+++A  L+ +  +I+ D 
Sbjct: 340 DEAPNAKGGVDKRTVLRLDPRLAPVKAAVLPLSRHADLSPKARDLAAELRKY-WNIDFDD 398

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
               I  + R       P  +        + ++ +R   + T +++ +      L 
Sbjct: 399 AGA-IGRRYRRQDEIGTPFCVTVDFDSLEDDAVTVRERDAMTQERIGIAKVADYLA 453


>gi|298241576|ref|ZP_06965383.1| histidyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
 gi|297554630|gb|EFH88494.1| histidyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
          Length = 510

 Score = 71.7 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 39/244 (15%), Positives = 88/244 (36%), Gaps = 17/244 (6%)

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD- 461
           + L     +  ++   G    + +      +R G D    +    +  V++     S+  
Sbjct: 272 QILNALEFLRELHAVSGPPPAVFEAVAELLERYGLDTAPLNELRQLVAVVEQCGVPSEQI 331

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
            +N  +  G   + G  FE   ++A G D Q            R++       S +    
Sbjct: 332 LLNLSLGRGVSYYTGLVFEIHAQEADGFDAQLCG-------GGRYDRLMRAVGSSRD--- 381

Query: 522 MIHRAVFGS-IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHL 580
            I    F   +ER +     +        L+  QA+V  ++++   YA  +A   +    
Sbjct: 382 -IAACGFAIGLERLLA----HIPQATLPVLNQTQALVIPVSANEFPYALRVARAAREAGQ 436

Query: 581 SIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
            +E D     +   +++   K+I + +I G+ EA +  + +R   ++   ++   +    
Sbjct: 437 PVEVDISGHGVGAGLKQAVKKQILLALIVGEDEARQNEVTVRNLETSVEWRLPFGELANG 496

Query: 641 LTKE 644
           L  +
Sbjct: 497 LVAD 500



 Score = 42.5 bits (98), Expect = 0.23,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 61/177 (34%), Gaps = 16/177 (9%)

Query: 288 KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
              Y  +++P +    L+  S     +   ++  +         R   L+P        +
Sbjct: 35  HAGYAHVDSPVLEHSDLFHAS-----FGQELW--QNLYAFRIHQRDLCLRPEYTASICRL 87

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
           +    +  + LP R    G ++R E  G      R R  TQ    +F  +    +   ++
Sbjct: 88  YLDHYQ-QQGLPQRFQYAGPIFRYEAPGR----SRYRQHTQLGIEIFGGQPAAADA--EM 140

Query: 408 HNLIISIYKDFGFEKIMVKLST--RPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR 462
             L   +  D G  +  ++L         +    L D A  ++ G+++ I  S +  
Sbjct: 141 IQLACEVLHDLGISRYRLELGHVGVASGFINRLHLDDHAARLLLGLMEQISRSEEGE 197


>gi|148643241|ref|YP_001273754.1| histidyl-tRNA synthetase [Methanobrevibacter smithii ATCC 35061]
 gi|261349966|ref|ZP_05975383.1| histidine--tRNA ligase [Methanobrevibacter smithii DSM 2374]
 gi|148552258|gb|ABQ87386.1| histidyl-tRNA synthetase, HisS [Methanobrevibacter smithii ATCC
           35061]
 gi|288860749|gb|EFC93047.1| histidine--tRNA ligase [Methanobrevibacter smithii DSM 2374]
          Length = 431

 Score = 71.7 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 38/202 (18%), Positives = 69/202 (34%), Gaps = 17/202 (8%)

Query: 443 DAENIMKGVLDTIK--NSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDF 500
           DA N ++ ++DT+         +N GV  G   + G  FE  +     +   CG     +
Sbjct: 243 DALNELEELIDTLASFKMENYTLNLGVARGLDYYTGIVFEVYIPSLGAQKQVCGG--GTY 300

Query: 501 NLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTI 560
           +L   F    V           +        +R +  + E           PI   V  I
Sbjct: 301 SLIKIFGGEEV-----------VSTGFAFGFDRLMNAIEELATPEELP--CPIDIYVAPI 347

Query: 561 TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
           +      A EI   L+S  ++ + D   +     +   +  K+  + I G K+     I 
Sbjct: 348 SDDVRLKAYEITQTLRSAGIACDVDLNGKKFKKIMNHANKIKVKQVAIIGAKDLENNQIT 407

Query: 621 IRRFGSTTTQKVSLLDAIPILT 642
           I+   S   + V L + +  + 
Sbjct: 408 IKNMESGNQELVDLDNVVEYIK 429


>gi|77409224|ref|ZP_00785933.1| seryl-tRNA synthetase [Streptococcus agalactiae COH1]
 gi|77172167|gb|EAO75327.1| seryl-tRNA synthetase [Streptococcus agalactiae COH1]
          Length = 425

 Score = 71.7 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 75/199 (37%), Gaps = 16/199 (8%)

Query: 261 DGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMF 319
            GS  +F+   G ++ + + S+M     K+ Y E+  P +++      +G +  ++ + F
Sbjct: 159 TGSRFLFYKGLGARLERAIYSFMLDEHAKEGYTEVIPPYMVNHDSMFGTGQYPKFKEDTF 218

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS--- 376
            +  +         F L P         +   +   +ELP+        +R+E   +   
Sbjct: 219 ELADS--------PFVLIPTAEVPLTNYYRDEIIDGKELPIYFTAMSPSFRSEAGSAGRD 270

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR-- 434
             GL+R+  F + +   F   E+ + E  K+     +I +       ++ L T       
Sbjct: 271 TRGLIRLHQFHKVEMVKFAKPEESYQELEKMTANAENILQKLNLPYRVITLCTGDMGFSA 330

Query: 435 --VGSDALWDDAENIMKGV 451
                  +W  A+N  + +
Sbjct: 331 AKTYDLEVWIPAQNTYREI 349


>gi|193214675|ref|YP_001995874.1| glycyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110]
 gi|193088152|gb|ACF13427.1| glycyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110]
          Length = 486

 Score = 71.7 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 51/347 (14%), Positives = 110/347 (31%), Gaps = 50/347 (14%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPS 374
            N+           +     L+P    G    F      +  ++P  +A+ G  +RNE  
Sbjct: 175 FNLMFQAPLGAVADEASIVYLRPETAQGIFVNFQTVREAARMKVPFGIAQIGKAFRNEIV 234

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY-KDFGFEKIMVKLSTRPEK 433
              + + R+  F Q +   F           +     +S Y +  G  K  +      + 
Sbjct: 235 KG-NFIFRMIEFEQMEMQYFVKPGTQMEAFEEWRERRMSWYTESLGISKEKLHWYKHDQL 293

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
              +DA +D                 +     G+   EG     + ++ L+         
Sbjct: 294 AHYADAAYDI----------------KFEFPFGIEEIEGIH--SRTDFDLR--------- 326

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF----------- 542
                     S  +  Y +  S++ +   +     GS   F+ ++ + +           
Sbjct: 327 -----RHQEYSGKSMEYFDQESKERYLPYVVETSAGSDRLFLAVLSDAYTEDEIDGESRV 381

Query: 543 KGNLPLWLSPIQAIVTTITSSAV--EYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
             NL   L+PI+A +  +       E AQ++   L+     ++ D    +I  + R    
Sbjct: 382 SLNLHPNLAPIKAGLFPLMKKEGMPEIAQKLQKELQKQ-FKVQYDDAG-SIGKRYRRQDE 439

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLP 647
              P           + ++ +R   +T   +++L      L+++ L 
Sbjct: 440 IGTPYCFTIDHDTLQDGTVTVRDRDTTEQSRIALDQVKAFLSEKLLK 486


>gi|327472776|gb|EGF18203.1| serine--tRNA ligase [Streptococcus sanguinis SK408]
          Length = 425

 Score = 71.7 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 73/193 (37%), Gaps = 16/193 (8%)

Query: 267 FWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD 325
           F+   G ++ + + ++M     K+ Y E+ TP +++      +G +  ++ + F +   +
Sbjct: 165 FYKGLGARLERAIYNFMLDEHGKEGYTEVITPYMVNHDSMFGTGQYPKFKEDTFELADTN 224

Query: 326 DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMR 382
                   F L P         +   +   +ELP+        +R+E   +     GL+R
Sbjct: 225 --------FVLIPTAEVPLTNYYRDEILDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIR 276

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSD 438
           +  F + +   F   E+ + E  K+     +I +       +V L T             
Sbjct: 277 LHQFHKVEMVKFAKPEESYEELEKMTANAENILQKLNLPYRVVALCTGDMGFSAAKTYDL 336

Query: 439 ALWDDAENIMKGV 451
            +W  A+N  + +
Sbjct: 337 EVWIPAQNTYREI 349


>gi|188991930|ref|YP_001903940.1| alanyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           B100]
 gi|205830286|sp|B0RTY1|SYA_XANCB RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|167733690|emb|CAP51895.1| unnamed protein product [Xanthomonas campestris pv. campestris]
          Length = 882

 Score = 71.7 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 36/177 (20%), Positives = 69/177 (38%), Gaps = 19/177 (10%)

Query: 29  SISRSLAKKAVAVAINGKVCDLSDPVREGSIEIITPED------PRSLAVIRHSCAHIMA 82
            IS  +A         G+       + EG++++            R   ++ HS  H++ 
Sbjct: 521 DISIEVADTQ---KFAGQFHGHVGRIAEGTLKLGDVLSGGIDVQRRGKTILNHSATHLLH 577

Query: 83  EAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYL 141
            A++ +        G  +  D   +DF   QP +++ELA IE+K+   +  +       +
Sbjct: 578 AALREVLGTHVQQKGSLVAPDRLRFDFSHFQPITAEELAVIERKVNAEVRTNHSVEVHNM 637

Query: 142 SHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
           + ++A +         K          E V + + G +  +LC G HV  TG +  F
Sbjct: 638 AMQEALDFGAMALFGEKY--------GERVRVLKMGGYSTELCGGTHVSRTGDIGLF 686


>gi|22536539|ref|NP_687390.1| seryl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
 gi|25010417|ref|NP_734812.1| seryl-tRNA synthetase [Streptococcus agalactiae NEM316]
 gi|76787984|ref|YP_329077.1| seryl-tRNA synthetase [Streptococcus agalactiae A909]
 gi|76798994|ref|ZP_00781192.1| seryl-tRNA synthetase [Streptococcus agalactiae 18RS21]
 gi|77406550|ref|ZP_00783601.1| seryl-tRNA synthetase [Streptococcus agalactiae H36B]
 gi|77411466|ref|ZP_00787811.1| seryl-tRNA synthetase [Streptococcus agalactiae CJB111]
 gi|54039691|sp|P67566|SYS_STRA5 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|54042042|sp|P67565|SYS_STRA3 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|123602391|sp|Q3K326|SYS_STRA1 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|22533373|gb|AAM99262.1|AE014208_2 seryl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
 gi|23094769|emb|CAD45988.1| seryl-tRNA synthetase [Streptococcus agalactiae NEM316]
 gi|76563041|gb|ABA45625.1| seryl-tRNA synthetase [Streptococcus agalactiae A909]
 gi|76585644|gb|EAO62204.1| seryl-tRNA synthetase [Streptococcus agalactiae 18RS21]
 gi|77162469|gb|EAO73435.1| seryl-tRNA synthetase [Streptococcus agalactiae CJB111]
 gi|77174857|gb|EAO77675.1| seryl-tRNA synthetase [Streptococcus agalactiae H36B]
          Length = 425

 Score = 71.7 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 75/199 (37%), Gaps = 16/199 (8%)

Query: 261 DGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMF 319
            GS  +F+   G ++ + + S+M     K+ Y E+  P +++      +G +  ++ + F
Sbjct: 159 TGSRFLFYKGLGARLERAIYSFMLDEHAKEGYTEVIPPYMVNHDSMFGTGQYPKFKEDTF 218

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS--- 376
            +  +         F L P         +   +   +ELP+        +R+E   +   
Sbjct: 219 ELADS--------PFVLIPTAEVPLTNYYRDEIIDGKELPIYFTAMSPSFRSEAGSAGRD 270

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR-- 434
             GL+R+  F + +   F   E+ + E  K+     +I +       ++ L T       
Sbjct: 271 TRGLIRLHQFHKVEMVKFAKPEESYQELEKMTANAENILQKLNLPYRVITLCTGDMGFSA 330

Query: 435 --VGSDALWDDAENIMKGV 451
                  +W  A+N  + +
Sbjct: 331 AKTYDLEVWIPAQNTYREI 349


>gi|319744352|gb|EFV96713.1| serine--tRNA ligase [Streptococcus agalactiae ATCC 13813]
          Length = 425

 Score = 71.7 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 75/199 (37%), Gaps = 16/199 (8%)

Query: 261 DGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMF 319
            GS  +F+   G ++ + + S+M     K+ Y E+  P +++      +G +  ++ + F
Sbjct: 159 TGSRFLFYKGLGARLERAIYSFMLDEHAKEGYTEVIPPYMVNHDSMFGTGQYPKFKEDTF 218

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS--- 376
            +  +         F L P         +   +   +ELP+        +R+E   +   
Sbjct: 219 ELADS--------PFVLIPTAEVPLTNYYRDEIIDGKELPIYFTAMSPSFRSEAGSAGRD 270

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR-- 434
             GL+R+  F + +   F   E+ + E  K+     +I +       ++ L T       
Sbjct: 271 TRGLIRLHQFHKVEMVKFAKPEESYQELEKMTANAENILQKLNLPYRVITLCTGDMGFSA 330

Query: 435 --VGSDALWDDAENIMKGV 451
                  +W  A+N  + +
Sbjct: 331 AKTYDLEVWIPAQNTYREI 349


>gi|154509410|ref|ZP_02045052.1| hypothetical protein ACTODO_01941 [Actinomyces odontolyticus ATCC
           17982]
 gi|153799044|gb|EDN81464.1| hypothetical protein ACTODO_01941 [Actinomyces odontolyticus ATCC
           17982]
          Length = 462

 Score = 71.7 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 55/324 (16%), Positives = 105/324 (32%), Gaps = 39/324 (12%)

Query: 334 FALKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
             L+P    G    + +    + ++ P  + + G  +RNE +   + + R R F Q +  
Sbjct: 160 HYLRPETAQGIFINYANVMNAARKKPPFGIGQIGKSFRNEITPG-NFIFRTREFEQMELE 218

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
            FC             +   + Y D G +   ++    P+         +   +  K  +
Sbjct: 219 FFCEPGTDEEWHQYWIDYRKAWYVDLGIDPENLREYEHPQ---------EKLSHYSKRTV 269

Query: 453 DTIKNSSQDRINTGVLLGEG--AFY---------GPKFEYILKDAIGRDWQCGTIQVDFN 501
           D            G L G      Y         G K +Y   +   R W    I+    
Sbjct: 270 DLEYRFGFQGSEWGELEGIANRTDYDLTVHSEASGAKLDYFDPNTKER-WTPYVIEPSAG 328

Query: 502 LPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT 561
           L     AF + ++ E   P        G  +R +          L   L+P++A V  ++
Sbjct: 329 LTRSLMAFLIEAYHEDEAPNAKG----GVDKRVV--------LKLDPRLAPVKAAVLPLS 376

Query: 562 --SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSI 619
                   AQE+A+ L+    +++ D     +  + R       P  I        + ++
Sbjct: 377 RKPELTGPAQELADELRGI-WNVDYDDAGA-VGRRYRRQDEIGTPFCITYDFDSIEDHAV 434

Query: 620 GIRRFGSTTTQKVSLLDAIPILTK 643
            IR   +    ++ L      L +
Sbjct: 435 TIRERDTMEQVRIPLDKVKSYLIE 458


>gi|332357990|gb|EGJ35823.1| serine--tRNA ligase [Streptococcus sanguinis SK1056]
          Length = 425

 Score = 71.7 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 74/193 (38%), Gaps = 16/193 (8%)

Query: 267 FWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD 325
           F+   G ++ + + ++M     K+ Y E+ TP +++ +    +G +  ++ + F +   +
Sbjct: 165 FYKGLGARLERAIYNFMLDEHGKEGYTEVITPYMVNHNSMFGTGQYPKFKEDTFELSDTN 224

Query: 326 DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMR 382
                   F L P         +   +   +ELP+        +R+E   +     GL+R
Sbjct: 225 --------FVLIPTAEVPLTNYYRDEILDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIR 276

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSD 438
           +  F + +   F   E+ + E  K+     +I +       +V L T             
Sbjct: 277 LHQFHKVEMVKFAKPEESYEELEKMTANAENILQKLNLPYRVVALCTGDMGFSAAKTYDL 336

Query: 439 ALWDDAENIMKGV 451
            +W  A+N  + +
Sbjct: 337 EVWIPAQNTYREI 349


>gi|290579784|ref|YP_003484176.1| putative seryl-tRNA synthetase [Streptococcus mutans NN2025]
 gi|254996683|dbj|BAH87284.1| putative seryl-tRNA synthetase [Streptococcus mutans NN2025]
          Length = 426

 Score = 71.7 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 39/243 (16%), Positives = 90/243 (37%), Gaps = 21/243 (8%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDL----FHIAEDGSGVIFWHRKGWKIF 276
           G   +   E+ ++    +   + + H  L  ++D+          GS  +F+   G ++ 
Sbjct: 115 GADEDENVEMRRWGKPRQFDFDIKAHWDLGEDLDILDWERGSKVTGSRFLFYKGLGARLE 174

Query: 277 QTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFA 335
           + + ++M     K+ Y E+  P +++      +G +  ++ + F +   D        + 
Sbjct: 175 RAIYNFMLDEHAKEGYTEVIPPYMVNHDSMFGTGQYPKFKEDTFELADND--------YV 226

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAH 392
           L P         +   +   +ELP+        +R+E   +     GL+R+  F + +  
Sbjct: 227 LIPTAEVPLTNYYRGEIIDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMV 286

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIM 448
            F   E  +NE  K+     +I +       ++ L T              +W  A+N  
Sbjct: 287 KFAKPEDSYNELEKMTANAENILQKLELPYRVITLCTGDMGFSAAKTYDLEVWIPAQNTY 346

Query: 449 KGV 451
           + +
Sbjct: 347 REI 349


>gi|156097506|ref|XP_001614786.1| prolyl-t-RNA synthase [Plasmodium vivax SaI-1]
 gi|148803660|gb|EDL45059.1| prolyl-t-RNA synthase, putative [Plasmodium vivax]
          Length = 476

 Score = 71.7 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 46/367 (12%), Positives = 109/367 (29%), Gaps = 72/367 (19%)

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
            +    L R   +     D +G+      G+K  + +IS++   +K  +   +    +  
Sbjct: 20  DKASELLQRANYIR----DVNGLYNLLPLGYKSIEKIISFLNTHLKRVNSHCLFMSILQA 75

Query: 302 QHLWQQSGHWDSYRANMFAVK---------------CADDTIKDLRTFALKPMNCPGHVA 346
           +  W  S     Y      V                       +     L P      ++
Sbjct: 76  KKWWNISDRSKLYSDEFLHVYKQKQQKGDSNKGTEAVMGKKKMEDDGLILSPTCEEQAIS 135

Query: 347 VFN---HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE 403
           + N   +     + LP+ + +F   +RNE       L + + F   D + F + +   +E
Sbjct: 136 LINQVYNENIPAKSLPLLIHQFNYKFRNEKRLE-KTLFKSKEFLMKDGYSFHSNDICLSE 194

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
             + +                                ++   + +K      K    D++
Sbjct: 195 TYEAYK-----------------------------ECYEKVFSHLKLPFKVTKKRKMDKM 225

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVM 522
           N               E+ +    G+  +   I  +      +    Y+N  +EK + + 
Sbjct: 226 NALESH----------EFQVLCRDGKYKEAAHIFKLGDYYSRKLGIKYLNKRNEKSN-IF 274

Query: 523 IHRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIAN--LLK 576
           +     G   R +  ++    +     LP  ++P    +      +   A ++A    L 
Sbjct: 275 MGSYGIGIY-RLLYFLVDSFYDGEGIRLPAQVAPFSVYLIQTNQRSKYSAAKVAKIGKLA 333

Query: 577 SHHLSIE 583
             + +++
Sbjct: 334 QANEAVQ 340


>gi|294787454|ref|ZP_06752707.1| glycine--tRNA ligase [Parascardovia denticolens F0305]
 gi|315226976|ref|ZP_07868764.1| glycyl-tRNA synthetase beta subunit [Parascardovia denticolens DSM
           10105]
 gi|294484810|gb|EFG32445.1| glycine--tRNA ligase [Parascardovia denticolens F0305]
 gi|315121108|gb|EFT84240.1| glycyl-tRNA synthetase beta subunit [Parascardovia denticolens DSM
           10105]
          Length = 502

 Score = 71.7 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 59/379 (15%), Positives = 118/379 (31%), Gaps = 58/379 (15%)

Query: 279 LISYMRRKIKD---DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFA 335
           L  +   K         EI  P       W +         NM           +     
Sbjct: 125 LEEHFEAKHGRQPSGMLEIPCPACGTVGKWTEPR-----DFNMMLRTHLGPVEDENSLHY 179

Query: 336 LKPMNCPGHVAVFNHGL-KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           L+P    G    F   L  S ++ P  +A  G  +RNE +   + + R R F Q +   F
Sbjct: 180 LRPETAQGIFVDFAQVLGTSRQKPPFGIANMGKSFRNEITPG-NFIFRTREFEQMEMEFF 238

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDT 454
               +         +   + Y D G     ++L   P+                    + 
Sbjct: 239 VKPGEDEEWHQYWIDARRAWYIDLGVNPDNLRLYEHPK--------------------EK 278

Query: 455 IKNSSQDRINTGVLLG-EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS 513
           + + S+  ++     G +G+ +G      L+    R     +         +  +++  +
Sbjct: 279 LSHYSKRTVDIEYKFGFQGSDWG-----ELEGIANRTDYDLSAHSRH--SGKDLSYFDPA 331

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIMIENFK----------------GNLPLWLSPIQAIV 557
             E+  P +I     G     +  +++ +                   L   LSP++A V
Sbjct: 332 SGERYVPYVIE-PAAGLTRSLMAFLVDAYDVDEAPNTKGGVDTRTVLRLDPRLSPVKAAV 390

Query: 558 TTIT--SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEAS 615
             ++        A  +A+ L+     I+ D     I  + R       P+ +        
Sbjct: 391 LPLSKQPDLQNIAHRLADELREDDWDIDYDEAGA-IGRRYRRQDEIGTPLCVTVDFDTVD 449

Query: 616 ERSIGIRRFGSTTTQKVSL 634
           ++++ IR   S   ++V+L
Sbjct: 450 DQAVTIRERDSMKQERVAL 468


>gi|88801439|ref|ZP_01116967.1| glycyl-tRNA synthetase [Polaribacter irgensii 23-P]
 gi|88782097|gb|EAR13274.1| glycyl-tRNA synthetase [Polaribacter irgensii 23-P]
          Length = 515

 Score = 71.7 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 55/341 (16%), Positives = 104/341 (30%), Gaps = 27/341 (7%)

Query: 308 SGHWDSYRA-NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEF 365
           S +W   +  N+        +        L+P    G    F +  K+   ++P  +A+ 
Sbjct: 186 SRNWTEVKQFNLMFGTQIGASADTATQVYLRPETAQGIFVNFLNVQKTGRMKIPFGIAQT 245

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
           G  +RNE   +   + R+R F Q +   F                 +  +   G      
Sbjct: 246 GKAFRNEIV-ARQFIFRMREFEQMEMQFFVKPGTQKEYYEHWKATRLKWHLSLGMGAENY 304

Query: 426 KLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKD 485
           +     +    +DA  D                 + +   G    EG      F+    +
Sbjct: 305 RFHDHDKLAHYADAAADI----------------EFKFPFGFKELEGIHSRTDFDLKAHE 348

Query: 486 AIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
           A         +Q      +R    YV   S     + +        E  +          
Sbjct: 349 A----HSGKKLQYFDPEENRSYTPYVVETSIGLDRMFLAVFSNSLHEEALENGTTRTVLK 404

Query: 546 LPLWLSPIQAIV--TTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           LP  L+P +A +          E A+EI   LK    ++  D ++  +  + R       
Sbjct: 405 LPAVLAPYKAAIFPLVKKDGLPEVAREIMKELK-WDFNVFYDEKDA-VGKRYRRQDAAGT 462

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P  I    +   +  + IR   +   ++V + +   I+ KE
Sbjct: 463 PFCITVDHESLEDACVTIRHRDTMEQKRVKISELKGIIEKE 503


>gi|77414886|ref|ZP_00790994.1| seryl-tRNA synthetase [Streptococcus agalactiae 515]
 gi|77159061|gb|EAO70264.1| seryl-tRNA synthetase [Streptococcus agalactiae 515]
          Length = 425

 Score = 71.7 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 75/199 (37%), Gaps = 16/199 (8%)

Query: 261 DGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMF 319
            GS  +F+   G ++ + + S+M     K+ Y E+  P +++      +G +  ++ + F
Sbjct: 159 TGSRFLFYKGLGARLERAIYSFMLDEHAKEGYTEVIPPYMVNHDSMFGTGQYPKFKEDTF 218

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS--- 376
            +  +         F L P         +   +   +ELP+        +R+E   +   
Sbjct: 219 ELADS--------PFVLIPTAEVPLTNYYRDEIIDGKELPIYFTAMSPSFRSEAGSAGRD 270

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR-- 434
             GL+R+  F + +   F   E+ + E  K+     +I +       ++ L T       
Sbjct: 271 TRGLIRLHQFHKVEMVKFAKPEESYQELEKMTANAENILQKLNLPYRVITLCTGDMGFSA 330

Query: 435 --VGSDALWDDAENIMKGV 451
                  +W  A+N  + +
Sbjct: 331 AKTYDLEVWIPAQNTYREI 349


>gi|326335224|ref|ZP_08201420.1| glycyl-tRNA synthetase beta subunit [Capnocytophaga sp. oral taxon
           338 str. F0234]
 gi|325692632|gb|EGD34575.1| glycyl-tRNA synthetase beta subunit [Capnocytophaga sp. oral taxon
           338 str. F0234]
          Length = 515

 Score = 71.7 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 64/392 (16%), Positives = 124/392 (31%), Gaps = 38/392 (9%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRAN 317
           I          HR G  + +  ++ ++  I++   EI  P +     W +         N
Sbjct: 145 IEYKQKAEAILHRLGKSLEREDLADVKALIEE--LEIVCP-ISGTKNWTEVKQ-----FN 196

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR-ELPVRLAEFGSVYRNEPSGS 376
           +          +      L+P    G    F++  K+ R ++P  +A+ G  +RNE   +
Sbjct: 197 LMFGTRLGAASEGAMDLYLRPETAQGIFVNFSNVQKTGRLKIPFGIAQTGKAFRNEIV-A 255

Query: 377 LHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              + R+R F Q +   F     +Q + E  K   L   +    G E        +    
Sbjct: 256 RQFIFRMREFEQMEMQFFIKPGTQQQWYEHWKKTRLDWHLSLGLGVENYRFHDHEKLAHY 315

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
                             D      + +   G    EG      F+     +    +   
Sbjct: 316 AD-------------AACDI-----EFKFPFGFKELEGIHSRTDFDL----SNHEKYSGK 353

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQ 554
            +Q      +R    YV   S     + +        E  +          LP  L+P +
Sbjct: 354 KLQYFDPEENRSYIPYVLETSVGLDRLFLAIFSHSLQEETLEGGETRTVLRLPFVLAPTK 413

Query: 555 AIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
             +  +       E A +I N LK +  ++  D ++  +  + R       P  +    +
Sbjct: 414 VAILPLLKKDGLPEIALQILNDLK-YDFTVAYDEKDA-VGRRYRRQDAVGTPFCVTVDHQ 471

Query: 613 EASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
              + ++ IR   +   Q+V +     I+ KE
Sbjct: 472 TKEDNTVTIRHRDTMEQQRVPIASLKDIIFKE 503


>gi|45656657|ref|YP_000743.1| alanyl-tRNA synthetase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
 gi|48428508|sp|P61703|SYA_LEPIC RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|45599893|gb|AAS69380.1| alanyl-tRNA synthetase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
          Length = 977

 Score = 71.7 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 36/151 (23%), Positives = 65/151 (43%), Gaps = 14/151 (9%)

Query: 56  EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGF-YYDFDKEQPF 114
           E  +EI      R      HS  H++  A++++  +  +  G I+   +  +DF      
Sbjct: 603 EAEVEI----TRRERLKFHHSGTHLLNGALRTLLGDHVLQKGSIVSPEYLRFDFSHPSSL 658

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
           +S+E+ QIE  + E I ++ P   + LS E A++         K          E V + 
Sbjct: 659 TSEEIRQIESWVNESIRKNFPVETKELSIEDAKKTGAVATFGEKY--------GERVRVV 710

Query: 175 RQGE-WFDLCRGPHVRSTGQVKKFFKLMKVA 204
           + G+   + C G HV  TG++  FF   + +
Sbjct: 711 QMGDASIEFCGGTHVSRTGEIGYFFIKKESS 741


>gi|24216106|ref|NP_713587.1| alanyl-tRNA synthetase [Leptospira interrogans serovar Lai str.
           56601]
 gi|41018228|sp|Q8F0T4|SYA_LEPIN RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|24197348|gb|AAN50605.1|AE011499_4 alanyl-tRNA synthetase [Leptospira interrogans serovar Lai str.
           56601]
          Length = 977

 Score = 71.7 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 36/151 (23%), Positives = 65/151 (43%), Gaps = 14/151 (9%)

Query: 56  EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGF-YYDFDKEQPF 114
           E  +EI      R      HS  H++  A++++  +  +  G I+   +  +DF      
Sbjct: 603 EAEVEI----TRRERLKFHHSGTHLLNGALRTLLGDHVLQKGSIVSPEYLRFDFSHPSSL 658

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
           +S+E+ QIE  + E I ++ P   + LS E A++         K          E V + 
Sbjct: 659 TSEEIRQIESWVNESIRKNFPVETKELSIEDAKKTGAVATFGEKY--------GERVRVV 710

Query: 175 RQGE-WFDLCRGPHVRSTGQVKKFFKLMKVA 204
           + G+   + C G HV  TG++  FF   + +
Sbjct: 711 QMGDASIEFCGGTHVSRTGEIGYFFIKKESS 741


>gi|320536417|ref|ZP_08036454.1| alanyl-tRNA synthetase [Treponema phagedenis F0421]
 gi|320146727|gb|EFW38306.1| alanyl-tRNA synthetase [Treponema phagedenis F0421]
          Length = 600

 Score = 71.7 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 32/134 (23%), Positives = 62/134 (46%), Gaps = 10/134 (7%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFSSDELAQIEK 124
           D        H+  H++ +A++ +  +     G  I  +   +DF   +P + +E A++E+
Sbjct: 454 DHSEQTTAYHTATHLLHKALRMVLGDHVEQKGSNITAERLRFDFSHPKPMTPEEKAEVER 513

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLC 183
            + E I  D P   + +S ++A++         K E        ++V +Y  G +  ++C
Sbjct: 514 IVNEQIQADLPVSFEVMSLDEAKKSGAMALFGEKYE--------DSVKVYSIGSFSKEVC 565

Query: 184 RGPHVRSTGQVKKF 197
            GPHV  TGQ+  F
Sbjct: 566 GGPHVEHTGQLGHF 579


>gi|123966593|ref|YP_001011674.1| seryl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515]
 gi|166222763|sp|A2BXQ6|SYS_PROM5 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|123200959|gb|ABM72567.1| Seryl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515]
          Length = 425

 Score = 71.7 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 41/244 (16%), Positives = 86/244 (35%), Gaps = 20/244 (8%)

Query: 220 IYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFH----IAEDGSGVIFWHRKGWKI 275
            +G   +   ++ ++   L++   + H ++   + LF          S  I     G ++
Sbjct: 117 PFGENESNNIQIKEWGDPLKKDNLKTHWEIGENLKLFDSIKSTKIAKSRFITLSGNGARL 176

Query: 276 FQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
            + LI++M      + Y E+  P +++    Q SG    +     + KCA+D        
Sbjct: 177 ERALINFMLDVHSNNGYLELMPPALVNSESLQGSGQLPKFSNE--SFKCAND------DL 228

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDA 391
            L P       A   + +   + LP++   +   +R E         GL+R+  F + + 
Sbjct: 229 WLSPTAEVPLTAFHKNEIIDPKLLPLKYVAYSPCFRREAGSYGRDTKGLIRLHQFNKVEL 288

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP----EKRVGSDALWDDAENI 447
           + F    +      +I     SI K       +V + T        R     +W  +   
Sbjct: 289 YWFSDPNKSLEAHKEITADAESILKKLNLPYRLVDICTGDLGFSSSRTFDLEVWLPSNKC 348

Query: 448 MKGV 451
            + +
Sbjct: 349 YREI 352


>gi|254487494|ref|ZP_05100699.1| alanyl-tRNA synthetase [Roseobacter sp. GAI101]
 gi|214044363|gb|EEB85001.1| alanyl-tRNA synthetase [Roseobacter sp. GAI101]
          Length = 885

 Score = 71.7 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 34/155 (21%), Positives = 67/155 (43%), Gaps = 9/155 (5%)

Query: 53  PVREGSIEIITPEDPRSLAVI-RHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDK 110
            +  G   ++  +  R  ++   HS  H++ EA+++   +     G     D   +D+  
Sbjct: 540 TITTGQAAVLDVDHARRTSIRANHSATHLLHEALRNALGDHVAQRGSLNAADRLRFDYSH 599

Query: 111 EQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKAREL------FESKKEAYKVEILES 164
             P S++ELAQ+E+++   I +++P   + ++ + AR L       E   +  +V  +  
Sbjct: 600 NSPMSAEELAQVEQEVNTYIRQNAPVETRIMTPDDARGLGAQALFGEKYGDEVRVVSMGR 659

Query: 165 IPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFK 199
            P        +     +LC G HVR TG +  F  
Sbjct: 660 QPGSGK-GADKSTYSLELCGGTHVRQTGDIGAFVL 693


>gi|168787948|ref|ZP_02812955.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC869]
 gi|261225988|ref|ZP_05940269.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK2000]
 gi|261256754|ref|ZP_05949287.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK966]
 gi|189372228|gb|EDU90644.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC869]
          Length = 876

 Score = 71.7 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 56/150 (37%), Gaps = 10/150 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFS 115
            +++    E  R+   + HS  H+M  A++ +        G ++ D    +DF   +   
Sbjct: 546 DAVQADVDEARRARIRLNHSATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMK 605

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            +E+  +E  M   I R+ P     +  E A+          K          E V +  
Sbjct: 606 PEEIRAVEDLMNAQIRRNLPIETNIMDLEAAKAKGAMALFGEKY--------DERVRVLS 657

Query: 176 QGEW-FDLCRGPHVRSTGQVKKFFKLMKVA 204
            G++  +LC G H   TG +  F  + +  
Sbjct: 658 MGDFSTELCGGTHASRTGDIGLFRIISESG 687


>gi|167044235|gb|ABZ08916.1| putative tRNA synthetase class II core domain (G, H, P, S and T)
           [uncultured marine microorganism HF4000_APKG5H11]
          Length = 429

 Score = 71.7 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 75/212 (35%), Gaps = 21/212 (9%)

Query: 243 KRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEINT 296
            + H +L  E+ +          GS        G K+ + LI++M     +   Y E++ 
Sbjct: 137 PKPHWELGEELGIIDFERGTKLAGSRFYTMLGYGPKLERALIAWMLDLHSNEHGYTEVSV 196

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P V+ + + + SG+   +  N++          D     L P        ++   +    
Sbjct: 197 PAVVKREIMEGSGNLPKFADNLY--------HDDEDDLWLIPTAEVPITNLYRDEIIPAN 248

Query: 357 ELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
            LP++       +R E + +     G+ RV  F + + + F   E    E   + +    
Sbjct: 249 TLPLKYVAQTPCFRREKASAGRDTRGIKRVHQFNKVEMYQFVEPETSNQELENLVDDAED 308

Query: 414 IYKDFGFEKIMVKLSTRPEKRV----GSDALW 441
           + +  GF   +++L T              +W
Sbjct: 309 VCRKLGFTYRVLQLCTGDMGFASSKTYDIEVW 340


>gi|24380240|ref|NP_722195.1| seryl-tRNA synthetase [Streptococcus mutans UA159]
 gi|30173154|sp|Q8DSB7|SYS_STRMU RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|24378250|gb|AAN59501.1|AE015015_1 putative seryl-tRNA synthetase [Streptococcus mutans UA159]
          Length = 426

 Score = 71.7 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 39/243 (16%), Positives = 90/243 (37%), Gaps = 21/243 (8%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDL----FHIAEDGSGVIFWHRKGWKIF 276
           G   +   E+ ++    +   + + H  L  ++D+          GS  +F+   G ++ 
Sbjct: 115 GADEDENVEMRRWGKPRQFDFDIKAHWDLGEDLDILDWERGSKVTGSRFLFYKGLGARLE 174

Query: 277 QTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFA 335
           + + ++M     K+ Y E+  P +++      +G +  ++ + F +   D        + 
Sbjct: 175 RAIYNFMLDEHAKEGYTEVIPPYMVNHDSMFGTGQYPKFKEDTFELADND--------YV 226

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAH 392
           L P         +   +   +ELP+        +R+E   +     GL+R+  F + +  
Sbjct: 227 LIPTAEVPLTNYYRGEIIDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMV 286

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIM 448
            F   E  +NE  K+     +I +       ++ L T              +W  A+N  
Sbjct: 287 KFAKPEDSYNELEKMTANAENILQKLELPYRVITLCTGDMGFSAAKTYDLEVWIPAQNTY 346

Query: 449 KGV 451
           + +
Sbjct: 347 REI 349


>gi|324991702|gb|EGC23634.1| serine--tRNA ligase [Streptococcus sanguinis SK353]
          Length = 425

 Score = 71.4 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 32/193 (16%), Positives = 72/193 (37%), Gaps = 16/193 (8%)

Query: 267 FWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD 325
           F+   G ++ + + ++M     K+ Y E+ TP +++      +G +  ++ + F +   +
Sbjct: 165 FYKGLGARLERAIYNFMLDEHGKEGYTEVITPYMVNHDSMFGTGQYPKFKEDTFELSDTN 224

Query: 326 DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMR 382
                   F L P         +   +   +ELP+        +R+E   +     GL+R
Sbjct: 225 --------FVLIPTAEVPLTNYYRDEILDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIR 276

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSD 438
           +  F + +   F   E+ + E   +     +I +       +V L T             
Sbjct: 277 LHQFHKVEMVKFAKPEESYEELENMTANAENILQKLNLPYRVVALCTGDMGFSAAKTYDL 336

Query: 439 ALWDDAENIMKGV 451
            +W  A+N  + +
Sbjct: 337 EVWIPAQNTYREI 349


>gi|325068609|ref|ZP_08127282.1| glycyl-tRNA synthetase [Actinomyces oris K20]
 gi|326773531|ref|ZP_08232814.1| glycine--tRNA ligase [Actinomyces viscosus C505]
 gi|326636761|gb|EGE37664.1| glycine--tRNA ligase [Actinomyces viscosus C505]
          Length = 463

 Score = 71.4 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 64/387 (16%), Positives = 125/387 (32%), Gaps = 52/387 (13%)

Query: 277 QTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF-A 335
           Q +  Y  RK  D   E  T  ++   +  Q G W   R     +K     + D      
Sbjct: 104 QLIEDYAARKGLD--PENVTLDMVPDPVTGQPGSWTEPREFSGLLKTYLGPVDDESGLHY 161

Query: 336 LKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           L+P    G    F +    + ++ P  + + G  +RNE +   + + R R F Q +   F
Sbjct: 162 LRPETAQGIFINFANVMSAARKKPPFGIGQVGKSFRNEITPG-NFIFRTREFEQMELEFF 220

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDT 454
           C             +   + Y D G  +  ++L   P          +   +  K  +D 
Sbjct: 221 CEPGTDEEWHQYWIDYRKAWYTDLGISEDNLRLYEHPA---------EKLSHYSKRTVDL 271

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH 514
                      G L G            + +    D          ++      ++  + 
Sbjct: 272 EYRFGFAGSEWGELEG------------IANRTDFDLSTHAEHSGKDMS-----YFDQTR 314

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIE--------NFKG--------NLPLWLSPIQAIVT 558
           SE+  P +I     G     +  ++E        N KG         L   ++P++A V 
Sbjct: 315 SERWTPYVIE-PSAGLTRSLMAFLVEAYTEDEAPNTKGGVDKRIVLKLDARIAPVKAAVL 373

Query: 559 TIT--SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASE 616
            ++        A+E+A  L+    ++E D     +  + R       P  +        +
Sbjct: 374 PLSRKEELTGPAKELAARLRRS-WNVEYDDAGA-VGRRYRRQDEVGTPFCLTYDFDSPED 431

Query: 617 RSIGIRRFGSTTTQKVSLLDAIPILTK 643
            ++ +R   + T +++ L      L +
Sbjct: 432 GAVTVRERDTMTQERIPLEGVERYLAE 458


>gi|221633039|ref|YP_002522264.1| glycyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
 gi|254782309|sp|B9L0I4|SYG_THERP RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|221156893|gb|ACM06020.1| glycyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
          Length = 468

 Score = 71.4 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 47/388 (12%), Positives = 118/388 (30%), Gaps = 58/388 (14%)

Query: 274 KIFQTLISYMRRKIKDDYEEINT-PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           ++ ++       ++    +E N    V     W         + N+           +  
Sbjct: 112 RLHRSTEGLSLDEMTRLVQEANLACPVCGVRDWT-----PVRKFNLMFRTFIGPVETEST 166

Query: 333 TFALKPMNCPGHVAVFNHGLKSYR-ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
              L+P         F + +++ R ++P  + + G  +RNE +   + + R+  F Q + 
Sbjct: 167 PVYLRPETAQAIFVNFKNVVQTSRVKIPFGIGQIGKAFRNEITPG-NFIFRLLEFEQMEI 225

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
             F   E          N +    +  GF+   ++      +                  
Sbjct: 226 EYFIRPEMWEEYFDHWLNEMGQFLRWIGFKPDRLRTREHGPQ------------------ 267

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
              + + S+  ++              F +  K+  G  ++           S  +  Y 
Sbjct: 268 --ELSHYSRKTVDFEYF----------FPFGWKELCGLAYRTDYDLRRHQEYSGEDLTYF 315

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFK----------------GNLPLWLSPIQA 555
           +    + +   +     G    F+ ++ + +                       ++P + 
Sbjct: 316 DQERNERYIPHVIEPTMGVERLFLALLCDAYDEEPAVDVNGNPYTRVVLRFHPRVAPYKV 375

Query: 556 IVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
            V  +      V  A+E+A  L+ +   IE D   ++I  + R       P  +    + 
Sbjct: 376 AVLPLLRKPELVTVAREVAQELRQY-FRIEYDET-QSIGRRYRRQDEIGTPYCVTIDYQT 433

Query: 614 ASERSIGIRRFGSTTTQKVSLLDAIPIL 641
             +R++ IR   +    +V +   +  +
Sbjct: 434 LEDRTVTIRDRDTMQQVRVPISGLVEEI 461


>gi|124006194|ref|ZP_01691029.1| glycyl-tRNA synthetase [Microscilla marina ATCC 23134]
 gi|123988118|gb|EAY27776.1| glycyl-tRNA synthetase [Microscilla marina ATCC 23134]
          Length = 500

 Score = 71.4 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 54/393 (13%), Positives = 119/393 (30%), Gaps = 50/393 (12%)

Query: 271 KGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           K   + Q L   M  +  D   E+   + +   +       +  + N+           +
Sbjct: 128 KAGALEQELGRLMDVEDMDGLRELLISEGIKCAISGTDNWTEVRQFNLMFSTEIGSVADE 187

Query: 331 LRTFALKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
                L+P    G    F +    S +++P  +A+ G  +RNE   +   + R+R F Q 
Sbjct: 188 SNKIYLRPETAQGIFVNFMNVQKTSRQQIPFGIAQIGKAFRNEIV-ARQFVFRMREFEQM 246

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMK 449
           +   F    +            +   +  G     ++     +                 
Sbjct: 247 EMQYFVRPGEEMQWYDHWKETRMKFLQAIGLPAEKLRYHDHIKLAHY------------- 293

Query: 450 GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAF 509
                     +  I    L G  +    + ++ L  +   ++    IQ         +  
Sbjct: 294 -ANAAADIEFEFPIGFKELEGIHS----RTDFDL--SKHAEFSKTKIQY-------VDDT 339

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIM---------IENFKG-------NLPLWLSPI 553
             +    K  P ++  ++ G    F+ ++         I+            +   L+P 
Sbjct: 340 IEDKDKRKYIPYVVETSI-GLDRLFLAVLSNSLTTAEGIDAKGNAKTRTFLKIHPALAPN 398

Query: 554 QAIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
           +  V  +       E A+ I N L+ H      + R   I        +   P  I    
Sbjct: 399 KVAVFPLLRKDGLPEIAKGIFNDLR-HDFKTIYEERGA-IGKLYTRQDMIGTPFCITVDH 456

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +   + ++ +R   +T  ++V + D   ++ KE
Sbjct: 457 QTKEDNTVTVRERDTTEQKRVKIEDLHAMINKE 489


>gi|322387197|ref|ZP_08060807.1| serine--tRNA ligase [Streptococcus infantis ATCC 700779]
 gi|321141726|gb|EFX37221.1| serine--tRNA ligase [Streptococcus infantis ATCC 700779]
          Length = 424

 Score = 71.4 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 54/368 (14%), Positives = 121/368 (32%), Gaps = 51/368 (13%)

Query: 106 YDFDKEQPFSSDELAQIEKKMQEIIARDSPF---------LKQYLSHEKARELFESKKEA 156
           +D   E+  +    A I  +M+EI A+              +  +S E A+     +   
Sbjct: 11  FDAVAEKLATRGVDAAILNEMKEIDAKRRDILVKVETLKAERNTVSAEIAQAKRNKENAD 70

Query: 157 YKVEILESIPA-----KENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGD 211
            K+  ++++ A        +              P++ +        +   V    W   
Sbjct: 71  DKIAAMQTLSAEVKALDAELAEIDARLTEFTTTLPNIPADSVPIGADEDDNVEVRRW--- 127

Query: 212 SNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRK 271
                     GT      E   +    E+    D  +  +      +        F+   
Sbjct: 128 ----------GTPREFDFEPKAHWDLGEDLGILDWERGGKVTGARFL--------FYKGL 169

Query: 272 GWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G ++ + + ++M     K+ Y E+ TP +++      +G++  ++ + F +   +     
Sbjct: 170 GARLERAIYNFMLDEHGKEGYTEVITPYMVNHDSMFGTGNYPKFKDDTFEISDTN----- 224

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFT 387
              + L P         +   +   +ELP+        +R+E   +     GL+R+  F 
Sbjct: 225 ---YVLIPTAEVPLTNYYRDEIIDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFH 281

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +   F   E+ + E  K+     +I +       +V LST              +W  
Sbjct: 282 KVEMVKFAKPEESYEELEKMTANAENILQKLNLPYRVVALSTGDMGFSAAKTYDLEVWIP 341

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 342 AQNTYREI 349


>gi|227878024|ref|ZP_03996017.1| seryl-tRNA synthetase [Lactobacillus crispatus JV-V01]
 gi|256850727|ref|ZP_05556150.1| seryl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
 gi|227862378|gb|EEJ69904.1| seryl-tRNA synthetase [Lactobacillus crispatus JV-V01]
 gi|256712440|gb|EEU27438.1| seryl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
          Length = 435

 Score = 71.4 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 77/188 (40%), Gaps = 9/188 (4%)

Query: 272 GWKIFQTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G  + + + ++ +    K+ Y EI  P +++    Q +G +  +  +++ +   DD  K 
Sbjct: 170 GALLERAVFNFFLDENTKEGYTEIIPPYLVNDASMQGTGQFPKFHEDVYTIVDNDDPDKP 229

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFT 387
            R   L P      V  F + +    +LP+ +      +R+E   +     GL+R+  F 
Sbjct: 230 -RDLTLIPTAEVPLVNYFRNEIIHENKLPINVTALSPAFRSEAGSAGRDTRGLIRMHEFR 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +    C  ++ ++E  K+ +    + +  G    +V LST              +W  
Sbjct: 289 KVEMVKVCKPDESWDELEKLTHNAEHLLQKLGLPYHVVALSTGDASFTSAKTYDLEVWMP 348

Query: 444 AENIMKGV 451
           A++  + +
Sbjct: 349 AQDKYREI 356


>gi|89889784|ref|ZP_01201295.1| glycine--tRNA ligase [Flavobacteria bacterium BBFL7]
 gi|89518057|gb|EAS20713.1| glycine--tRNA ligase [Flavobacteria bacterium BBFL7]
          Length = 515

 Score = 71.4 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 58/415 (13%), Positives = 125/415 (30%), Gaps = 38/415 (9%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDY 291
            + L    +   +  ++   + D     E    V+ + +K  +    L + +  +     
Sbjct: 113 EKNLQKANKEIAKAAKRFGDDFDADMYRETNPRVMGYMKKATEPTARLATLLEAEDLAG- 171

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRA-NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH 350
            +    ++        S +W   R  N+        +        L+P    G    F +
Sbjct: 172 VKALIEELEISDPDTGSKNWTDVRQFNLMFGTKIGASADTATDLFLRPETAQGIFVNFLN 231

Query: 351 GLKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKI 407
             K+   ++P  +A+ G  +RNE   +   + R R F Q +   F     E  + E  K 
Sbjct: 232 VQKTGRMKIPFGIAQTGKAFRNEIV-ARQFIFRQREFEQMEMQYFVKPGTELEWFEIWKE 290

Query: 408 HNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGV 467
             +        G E        +      +    +         L+ I + +   +    
Sbjct: 291 RRMAWHNSLGMGAENYRFHDHEKLAHYANAATDIEFDFPFGFKELEGIHSRTDFDLKAHE 350

Query: 468 LLGEGAFYGPKFEYILKDAIGRDWQC---GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIH 524
                   G K ++   +            +I +D    + F+   V+   E        
Sbjct: 351 EHS-----GKKLQFFDHEENKNYVPYVLETSIGLDRMFLAVFSNSLVDEKLENGG----- 400

Query: 525 RAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTI--TSSAVEYAQEIANLLKSHHLSI 582
                          E     LP  L+P++A +  +       E A EI + LK      
Sbjct: 401 ---------------ERTVLKLPAVLAPVKAAILPLLKKDGLPEIANEIIDELKWSMKVA 445

Query: 583 ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
                 ++I  +   H +   P  +        + ++ +R   +   ++V++ D 
Sbjct: 446 --YEEKDSIGKRYARHDLNGTPYCVTIDHDTKEDHAVTVRDRDTMNQERVAIKDL 498


>gi|33866426|ref|NP_897985.1| seryl-tRNA synthetase [Synechococcus sp. WH 8102]
 gi|46577187|sp|Q7U518|SYS_SYNPX RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|33633204|emb|CAE08409.1| putative seryl-tRNA synthetase [Synechococcus sp. WH 8102]
          Length = 425

 Score = 71.4 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 38/244 (15%), Positives = 81/244 (33%), Gaps = 20/244 (8%)

Query: 220 IYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED----GSGVIFWHRKGWKI 275
             G       EL ++    +E    +H ++A  + LF          S  +    +G ++
Sbjct: 117 PEGKDETDNVELRRWGSPRQEEGLEEHWQIAERLHLFDTERSVRIAQSRFVTLMGQGARL 176

Query: 276 FQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
            + LI++M        Y E+  P +++      SG    +  + F     D         
Sbjct: 177 ERALINFMLDLHTSKGYREVMPPVLVNSASLTGSGQLPKFADDCFRCSEDD--------L 228

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDA 391
            L P       ++    +    +LP+R A +   +R E         GL+R+  F + + 
Sbjct: 229 WLTPTAEVPVTSLHRDEIIPADQLPLRYAAYSPCFRREAGSYGRDTRGLIRLHQFNKVEL 288

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST----RPEKRVGSDALWDDAENI 447
           + F   +       +I     ++ +       ++ L T       +R     +W      
Sbjct: 289 YWFAHPDHSAEAHAQITADAEAVLQALELPYRVLDLCTADIGFSAQRTYDLEVWLPGAEA 348

Query: 448 MKGV 451
            + +
Sbjct: 349 YREI 352


>gi|290960578|ref|YP_003491760.1| glycyl-tRNA synthetase [Streptomyces scabiei 87.22]
 gi|260650104|emb|CBG73220.1| glycyl-tRNA synthetase [Streptomyces scabiei 87.22]
          Length = 460

 Score = 71.4 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 46/334 (13%), Positives = 94/334 (28%), Gaps = 49/334 (14%)

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
                T        L+P    G    F      S R+ P  +A+ G  +RNE +   + +
Sbjct: 145 THLGPTQDTGSVAYLRPETAQGIFTNFAQVQTTSRRKPPFGIAQVGKSFRNEITPG-NFI 203

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            R R F Q +   F    +             + Y   G  +  ++    P+        
Sbjct: 204 FRTREFEQMEMEFFVKPGEDEKWQEYWMQERWNWYTGLGLREENMRWYDHPK-------- 255

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDF 500
            +   +  K   D            G L G                  R           
Sbjct: 256 -EKLSHYSKRTADIEYRFQFGGNEWGELEG---------------VANRTDYDLNAHS-- 297

Query: 501 NLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW----------- 549
              S  +  Y +  S + +   +     G     +  +++ +  +               
Sbjct: 298 -KASGQDLSYYDQESSERYTPYVIEPAAGVGRTLLAFLLDAYTEDEAPNAKGKLEKRAVL 356

Query: 550 -----LSPIQAIVTTIT--SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
                ++P++  V  ++        A+ +A  L+  + +I+ D     I  + R      
Sbjct: 357 RLDHRIAPVKVAVLPLSRNPELSPKAKGLAAALR-QNWNIDFDDAGA-IGRRYRRQDEIG 414

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
            P  +        + ++ +R   S   ++VSL  
Sbjct: 415 TPYCVTVDFDTLDDNAVTVRERDSMKQERVSLDQ 448


>gi|224368220|ref|YP_002602383.1| SerS [Desulfobacterium autotrophicum HRM2]
 gi|259511665|sp|C0QLD3|SYS_DESAH RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|223690936|gb|ACN14219.1| SerS [Desulfobacterium autotrophicum HRM2]
          Length = 427

 Score = 71.4 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 50/347 (14%), Positives = 115/347 (33%), Gaps = 41/347 (11%)

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENV-----TL 173
            A+ EKK +E++ +      Q  +        +  KE     ILE     + +     TL
Sbjct: 30  FARAEKKRRELLQQIEELRHQRNTVSDEIARMKRNKEDAGTSILEMRTVSDEIKTLDKTL 89

Query: 174 YRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQ 233
             Q ++        + +                    D++   L +  GT  +    +  
Sbjct: 90  AEQDDFIQQFM-MAIPNMPHPDVPMGA---------SDADNT-LEKKVGTPRSFDFPIKA 138

Query: 234 YLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD--DY 291
           +    E+    D  + A+                +   G K+ + LI++M     +   Y
Sbjct: 139 HWDIGEDLGILDFPRAAKITGARF--------SLYLGSGAKLERALINFMLDLHTNEHGY 190

Query: 292 EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHG 351
            E   P ++++     +G    +  ++F +        + + + L P +      ++   
Sbjct: 191 TETLPPFIVNRESLLGTGQLPKFEEDLFKI--------EGQEYYLIPTSEVPMTNIYRDE 242

Query: 352 LKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
           + +   LP++   +   +R+E         GL+R   F + +   + T E  + E   + 
Sbjct: 243 VLNEENLPIKFTAYTPCFRSEAGSYGKDTRGLIRQHQFNKVELVKYTTPETSYQELESLL 302

Query: 409 NLIISIYKDFGFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGV 451
               ++ K  G    +V L +        R     +W   ++  + +
Sbjct: 303 ANAETVLKRLGLPYQVVTLCSGDLGFSATRTYDIEVWMPGQDKYREI 349


>gi|256844211|ref|ZP_05549698.1| seryl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|262047844|ref|ZP_06020793.1| seryl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
 gi|312976669|ref|ZP_07788418.1| serine--tRNA ligase [Lactobacillus crispatus CTV-05]
 gi|256614116|gb|EEU19318.1| seryl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|260571837|gb|EEX28409.1| seryl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
 gi|310895997|gb|EFQ45062.1| serine--tRNA ligase [Lactobacillus crispatus CTV-05]
          Length = 435

 Score = 71.4 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 77/188 (40%), Gaps = 9/188 (4%)

Query: 272 GWKIFQTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G  + + + ++ +    K+ Y EI  P +++    Q +G +  +  +++ +   DD  K 
Sbjct: 170 GALLERAVFNFFLDENTKEGYTEIIPPYLVNDASMQGTGQFPKFHEDVYTIVDNDDPDKP 229

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFT 387
            R   L P      V  F + +    +LP+ +      +R+E   +     GL+R+  F 
Sbjct: 230 -RDLTLIPTAEVPLVNYFRNEIIHENKLPINVTALSPAFRSEAGSAGRDTRGLIRMHEFR 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +    C  ++ ++E  K+ +    + +  G    +V LST              +W  
Sbjct: 289 KVEMVKVCKPDESWDELEKLTHNAEHLLQKLGLPYHVVALSTGDASFTSAKTYDLEVWMP 348

Query: 444 AENIMKGV 451
           A++  + +
Sbjct: 349 AQDKYREI 356


>gi|295693517|ref|YP_003602127.1| seryl-tRNA synthetase [Lactobacillus crispatus ST1]
 gi|295031623|emb|CBL51102.1| Seryl-tRNA synthetase [Lactobacillus crispatus ST1]
          Length = 435

 Score = 71.4 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 77/188 (40%), Gaps = 9/188 (4%)

Query: 272 GWKIFQTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G  + + + ++ +    K+ Y EI  P +++    Q +G +  +  +++ +   DD  K 
Sbjct: 170 GALLERAVFNFFLDENTKEGYTEIIPPYLVNDASMQGTGQFPKFHEDVYTIVDNDDPDKP 229

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFT 387
            R   L P      V  F + +    +LP+ +      +R+E   +     GL+R+  F 
Sbjct: 230 -RDLTLIPTAEVPLVNYFRNEIIHENKLPINVTALSPAFRSEAGSAGRDTRGLIRMHEFR 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +    C  ++ ++E  K+ +    + +  G    +V LST              +W  
Sbjct: 289 KVEMVKVCKPDESWDELEKLTHNAEHLLQKLGLPYHVVALSTGDASFTSAKTYDLEVWMP 348

Query: 444 AENIMKGV 451
           A++  + +
Sbjct: 349 AQDKYREI 356


>gi|325958379|ref|YP_004289845.1| ATP phosphoribosyltransferase regulatory subunit [Methanobacterium
           sp. AL-21]
 gi|325329811|gb|ADZ08873.1| ATP phosphoribosyltransferase regulatory subunit [Methanobacterium
           sp. AL-21]
          Length = 429

 Score = 71.4 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 68/432 (15%), Positives = 128/432 (29%), Gaps = 101/432 (23%)

Query: 276 FQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
            + + + M+R  +   Y EI TP   +  L+                +      K  R  
Sbjct: 20  RKNVENTMKRIFESYGYGEIKTPIFEELSLFTTKS------GEGIKDQIYHFQDKSGRDL 73

Query: 335 ALKP-MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQ----- 388
           AL+P +  P          K+ +  PV++  FGS +R E   +     R R F Q     
Sbjct: 74  ALRPELTAPVARMYIKELQKAPK--PVKMYYFGSCFRYERPQA----GRFRQFWQLGCEL 127

Query: 389 ------------DDAHVFCTKEQMFNEC------LKIHNLIISIYKDFGF---------E 421
                             C  E            L I   I+   +  G          +
Sbjct: 128 IGGKSPGSEAEVISMAAHCLDELGLENYEIHIGNLGILRNILIDAQILGDTQDQVMAAID 187

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSS---------------------- 459
           K   +      K + +D    D+E ++  ++D   ++S                      
Sbjct: 188 KGDAEELKNLLKSINTDE---DSEELLLKLIDMKGDASILKDAEALINCSENACNALFEL 244

Query: 460 -------------QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF 506
                           +N G+  G   + G  FE  +   +G   Q       +NL   F
Sbjct: 245 EKLLEALEAFGFSNYTVNLGIARGLDYYTGTVFEIYV-HGLGAQKQISG-GGTYNLIELF 302

Query: 507 NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVE 566
               V S                  +R +  +    +         ++  V  + S    
Sbjct: 303 GGEKVESTGFA-----------FGFDRVMEAL--KKQQTTIDKEEAVKVFVAPLNSDLSL 349

Query: 567 YAQEIANLLKSHHLSIETDFRNETINYKI-REHSIKKIPIIIICGDKEASERSIGIRRFG 625
              EI   L+  ++  E D   + +  KI      K+I  +++ G +E  E  + ++   
Sbjct: 350 TGYEIVQKLRKANIGAEVDLVGKKL-KKILSYADTKQISYVVLLGSREFEEGKVTVKDMN 408

Query: 626 STTTQKVSLLDA 637
           +   + V++ + 
Sbjct: 409 TGEQESVNISEV 420


>gi|294946602|ref|XP_002785126.1| prolyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
 gi|239898583|gb|EER16922.1| prolyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
          Length = 106

 Score = 71.4 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 41/105 (39%), Gaps = 19/105 (18%)

Query: 550 LSPIQAIVTTI--------------TSSAVEYAQEIANLLKSHHLSIETDFR-NETINYK 594
           ++ +Q ++  I                   E  + I   L+++ + +  D R ++T  YK
Sbjct: 1   VAEVQVVIVPIPPKGAGAQWSTAELKDMIGEKCKSIYEDLEANGVRVVLDDREDKTPGYK 60

Query: 595 IREHSIKKIPIIIICGDKEASERSIG-IRR---FGSTTTQKVSLL 635
                +K +P+ I  G K+  +  +  +RR     S   +  S+ 
Sbjct: 61  FNHWELKGVPLRIEVGAKDLEKGVVTFVRRNTGRKSQEAKHASVE 105


>gi|327312529|ref|YP_004327966.1| glycine--tRNA ligase [Prevotella denticola F0289]
 gi|326946200|gb|AEA22085.1| glycine--tRNA ligase [Prevotella denticola F0289]
          Length = 515

 Score = 71.4 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 60/342 (17%), Positives = 113/342 (33%), Gaps = 60/342 (17%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        + +      L+P    G    F +  K+   +LP  + + G  +RNE  
Sbjct: 194 FNLMFSTEVGASAEATNKIYLRPETAQGIFVNFLNVQKTGRMKLPFGICQIGKAFRNEIV 253

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
            +   + R+R F Q +   FC    E  + E  K H L        G E        +  
Sbjct: 254 -ARQFVFRMREFEQMEMQFFCQPGTEMKWFEYWKKHRLAWHEALGMGDENYRFHDHEKLA 312

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
                    + A +I            +  +  G    EG      F+      + +  +
Sbjct: 313 HYA------NAATDI------------EFHMPFGFKEVEGIHSRTDFD------LSQHEK 348

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK--------- 543
               Q+ +  P R         +E   P  +  ++ G    F+ +M  ++          
Sbjct: 349 FSGRQIKYFDPER---------NESYTPYDVETSI-GVDRMFLSVMCHSYTEEQLENGSS 398

Query: 544 ---GNLPLWLSPIQAIVTTITSSAV--EYAQEIANLLKSH---HLSIETDFRNETINYKI 595
                LP  L+P++  V  + +     E AQEI N LK H   H+  +     ++I  + 
Sbjct: 399 RVVLKLPEPLAPVKCAVLPLVNKDGLPEKAQEIVNSLKFHFNTHMEAK-----DSIGKRY 453

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
           R       P  +       ++ ++ +R   S   ++V +   
Sbjct: 454 RRQDAIGTPFCVTVDGDTLNDNTVTLRYRDSMKQERVPVEKL 495


>gi|169836559|ref|ZP_02869747.1| prolyl-tRNA synthetase [candidate division TM7 single-cell isolate
           TM7a]
          Length = 289

 Score = 71.4 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 59/148 (39%), Gaps = 13/148 (8%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGNL 546
           R  + G I  +        +A  ++ + ++    +I    +G  + R +  +IE    + 
Sbjct: 126 RGMEVGHIFKLGDKYSKALDAKVLDENGKQQ---VIQMGCYGIGVSRLMSAVIEQKHDDF 182

Query: 547 PL-WLSPIQAIVT------TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
            + W   I   +           + V  A+ I   LK+ ++ +  D RNE   +K ++  
Sbjct: 183 GIIWPKSIAPYIADVIIANVKDETQVNVAERIYEALKNENIDVVLDDRNERAGFKFKDAD 242

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGST 627
           +   P+ I+ G K A+   + ++   + 
Sbjct: 243 LIGFPLKIVAG-KGAANGIVEVKDRATG 269


>gi|311745437|ref|ZP_07719222.1| glycine--tRNA ligase [Algoriphagus sp. PR1]
 gi|126577987|gb|EAZ82207.1| glycine--tRNA ligase [Algoriphagus sp. PR1]
          Length = 488

 Score = 71.4 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 50/337 (14%), Positives = 109/337 (32%), Gaps = 51/337 (15%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR-ELPVRLAEFGSVYRNEPS 374
            N+          +D  T  L+P    G    F +  K+ R ++P  +A+ G  +RNE  
Sbjct: 171 FNLMFSTQVGSVAEDASTIFLRPETAQGIFVNFLNVQKTARMKVPFGIAQIGKAFRNEIV 230

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
            +   + R+R F Q +   F           K     +  +   G     ++     +  
Sbjct: 231 -ARQFIFRMREFEQMEMQFFVRPGTELEWYQKWAETRMKWHLALGTTAEKLRKHDHEKLA 289

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
             ++A  D                 +     G    EG     + ++ LK          
Sbjct: 290 HYANAAMDI----------------EYDFPFGFKEVEGIH--SRTDFDLK---------- 321

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF-----------K 543
                     +   ++    ++   P +I  ++ G+   F+  +   +            
Sbjct: 322 ---SHQEFSKKKQQYFDPEVNKNYIPYVIETSI-GADRLFLMTLCNAYTEEKTEEKSRTY 377

Query: 544 GNLPLWLSPIQAIVTTITSSAV--EYAQEIANLLK-SHHLSIETDFRNETINYKIREHSI 600
                 ++P++A +  IT      + A+EI +LLK   ++         +I  +     +
Sbjct: 378 LKFHPAIAPVKAAILPITKKDGLPDKAKEIVDLLKYDFNI---IYEEAASIGKRYARQDL 434

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
              P  I    +   + ++ IR   +T  ++V + + 
Sbjct: 435 IGTPFCIAVDHQTLEDNTVTIRHRDTTEQERVPISEL 471


>gi|301168127|emb|CBW27713.1| Glycyl-tRNA synthetase [Bacteriovorax marinus SJ]
          Length = 440

 Score = 71.4 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 57/451 (12%), Positives = 132/451 (29%), Gaps = 90/451 (19%)

Query: 251 REMDLFHIAED---GSGVIFWHRKGWKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLW 305
           R   +F  +E          +   G ++   +     + +  ++D   I+    +   +W
Sbjct: 18  RRGFIFQSSEIYGGLGSCWDYAPYGIQLKNNVKESWWKAMTFREDVVGIDASIFMHPMVW 77

Query: 306 QQSGHWDSYRANMFAVKCADDTIKDLR--------------------------------- 332
           + SGH D +   M   K   +  ++ +                                 
Sbjct: 78  KASGHVDGFSDPMVDCKSCKERYREDQIDTSKPCAKCGATDFTEPRDFNLMFNTQMGAVT 137

Query: 333 ----TFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
               T  L+P    G    F +  ++  ++LP  +A+ G  +RNE +   + + R R F 
Sbjct: 138 DSSSTVYLRPETAQGIFVNFLNVQQTMRKKLPFGIAQIGKAFRNEITPG-NFIFRTREFE 196

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENI 447
           Q +   F       +   K   +    + D G     ++          S A + DA   
Sbjct: 197 QMEMQFFVKPGTQLDAMEKWKEVRWQWHIDNGLRAEKLRWEPHGP---DSLAHYADA--- 250

Query: 448 MKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFN 507
                       +  +  G + G  +    + ++ LK                    +  
Sbjct: 251 ------ATDIEYEFPMGWGEMEGIHS----RTDFDLK-------------RHEEFSKKNL 287

Query: 508 AFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI-------------ENFKGNLPLWLSPIQ 554
            +       K +   +     G     + ++              E         ++PI+
Sbjct: 288 KYLDTEDGNKKYLPYVLETSVGCDRAVLALLCDAYRLENEGDKENERVVMKFHPKIAPIK 347

Query: 555 AIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
             V  +         A+++   ++ +    E D    +I  + R       P+ +     
Sbjct: 348 VAVLPLVKKEKLDTPARKLFETIQKN-YQAEYDVAG-SIGKRYRRQDEIGTPLCVTFDFD 405

Query: 613 EASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              + ++ +R   + T ++V++      L  
Sbjct: 406 TLDDNAVTVRDRDTMTQERVAIDQLDKYLRD 436


>gi|305666059|ref|YP_003862346.1| glycyl-tRNA synthetase [Maribacter sp. HTCC2170]
 gi|88710834|gb|EAR03066.1| glycyl-tRNA synthetase [Maribacter sp. HTCC2170]
          Length = 514

 Score = 71.4 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 59/344 (17%), Positives = 112/344 (32%), Gaps = 33/344 (9%)

Query: 308 SGHWDSYRA-NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEF 365
           S +W   +  N+        + +      L+P    G    F +  K+   ++P  +A+ 
Sbjct: 186 SKNWTDVKQFNLMFGTKLGASAESAMDLYLRPETAQGIFVNFLNVQKTGRMKIPFGIAQT 245

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
           G  +RNE   +   + R+R F Q +   F           K     +  +   G  +   
Sbjct: 246 GKAFRNEIV-ARQFIFRMREFEQMEMQFFIRPGSQKEWYEKWKETRLKWHLSLGMGEENY 304

Query: 426 KLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK---FEYI 482
           +     +    +DA  D       G  +     S+   +   L     F G K   F+  
Sbjct: 305 RFHDHEKLAHYADAAADIEFRFPFGFKELEGIHSRTDFD---LSQHEKFSGKKLQYFDPE 361

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
           LK+         +I +D    + F+        E      +                   
Sbjct: 362 LKENYVPYVVETSIGLDRMFLAVFSKSLKEEELENGSTRTV------------------- 402

Query: 543 KGNLPLWLSPIQAIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              LP  L+P +A V  +       E A +I + LK    ++  D ++  +  + R    
Sbjct: 403 -LKLPAVLAPTKAAVLPLVKKDGLPEIAHKIIDDLK-WDFNVIYDGKDA-VGRRYRRQDA 459

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
              P  I    +   ++++ IR   +    +V + D   I+ KE
Sbjct: 460 AGTPFCITVDHQTIEDQTVTIRHRDTMKQSRVDIADLKGIIDKE 503


>gi|260434791|ref|ZP_05788761.1| seryl-tRNA synthetase [Synechococcus sp. WH 8109]
 gi|260412665|gb|EEX05961.1| seryl-tRNA synthetase [Synechococcus sp. WH 8109]
          Length = 425

 Score = 71.4 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 80/234 (34%), Gaps = 20/234 (8%)

Query: 220 IYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED----GSGVIFWHRKGWKI 275
             G + +   E+ ++     +    +H ++A  + LF          S  +    +G ++
Sbjct: 117 PDGRSEDDNVEVRRWGTPRVDDNLDEHWQIAERLQLFDTERSVRIAQSRFVTLMGQGARL 176

Query: 276 FQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
            + LI++M        Y E+  P +++      SG    +    F     D         
Sbjct: 177 ERGLINFMLDLHTSKGYREVLPPVLVNSASLTGSGQLPKFAEESFRCAEDD--------L 228

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDA 391
            L P       ++    +    +LP+R A +   +R E         GL+R+  F + + 
Sbjct: 229 WLTPTAEVPVTSLHRDEIIPADQLPLRYAAYSPCFRREAGSYGRDTRGLIRLHQFNKVEL 288

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST----RPEKRVGSDALW 441
           + F   +Q      +I     ++ +       ++ L T       +R     +W
Sbjct: 289 YWFVHPDQSEEAHQQITADAEAVLQALELPYRVLDLCTADLGFSARRTYDLEVW 342


>gi|225166272|ref|ZP_03727969.1| prolyl-tRNA synthetase [Opitutaceae bacterium TAV2]
 gi|224799485|gb|EEG18017.1| prolyl-tRNA synthetase [Opitutaceae bacterium TAV2]
          Length = 296

 Score = 71.4 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 64/163 (39%), Gaps = 10/163 (6%)

Query: 489 RDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN-- 545
           R  + G I  +      +FNA Y     ++ HP+++     G I R +  +IE       
Sbjct: 117 RGIEVGHIFKLGTKYSEKFNALY-TDDQKQQHPMVMGCYGIG-ISRTLQAIIEQCHDADG 174

Query: 546 --LPLWLSPIQAIVTTITS---SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              P   +P Q +VT +     +    A+++A   +     +  D R E    K ++  +
Sbjct: 175 IIWPWACAPFQVLVTVLDPQDATVAALAEKLAAAAERAGADVLLDDRTERPGVKFKDADL 234

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             IP+ I  G K   +  I ++        ++ + +A   L +
Sbjct: 235 IGIPLRITVGGKGIKDGIIELKWRTKKEVSRIPVGEAETHLAE 277


>gi|254489976|ref|ZP_05103171.1| alanyl-tRNA synthetase [Methylophaga thiooxidans DMS010]
 gi|224465061|gb|EEF81315.1| alanyl-tRNA synthetase [Methylophaga thiooxydans DMS010]
          Length = 858

 Score = 71.4 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 60/131 (45%), Gaps = 10/131 (7%)

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQI 122
            E  R    + HS  H++  A++++  +  +  G +++     +DF   +P + D+L  I
Sbjct: 534 DESNRQATALNHSATHLLHAALRNVLGDHVMQKGSLVDPQRLRFDFSHFEPVTPDQLHDI 593

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FD 181
           E+ + + I  + P   + ++ E+A++         K          + V +   G++  +
Sbjct: 594 ERMVNQQIRLNHPVDTKLMAIEEAKKSGAMALFGEKY--------DDEVRVLSMGDFSIE 645

Query: 182 LCRGPHVRSTG 192
           LC G HV+ TG
Sbjct: 646 LCGGTHVQHTG 656


>gi|254518949|ref|ZP_05131005.1| histidyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
 gi|226912698|gb|EEH97899.1| histidyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
          Length = 432

 Score = 71.4 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 69/429 (16%), Positives = 133/429 (31%), Gaps = 85/429 (19%)

Query: 275 IFQTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           I Q   + +  KI   YEE     +               +A +   K A +T K +  F
Sbjct: 20  IEQRKFNDIVEKITKVYEENGCLPI---------DTPIIEKAEILLAKNAGETEKQVYAF 70

Query: 335 ALKPMNCPGHVAV------FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQ 388
                N      +      +     +    P++  + G VYR E +       R R F Q
Sbjct: 71  QKGSNNLALRFDLTVPFARYTSQYFNDLNFPLKRYQIGKVYRGERNQR----GRYREFYQ 126

Query: 389 DDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR-------------- 434
            D  +    +        + +L    +K  G +    ++S R                  
Sbjct: 127 CDVDIIGKDKLSIKNDALVISLASKAFKSIGLKDYKFQISNRKILSALLSSLNIESSIDV 186

Query: 435 -VGSDALWDDAENIMKGVLDTIKNSSQDR-INTGVLLGEGAF------------------ 474
            +  D      E   K  LD + N    + IN  + +                       
Sbjct: 187 MILIDKYDKIGEQTFKEELDKLVNKESAKIINKVININGSKDKVLEELELLNIQDEKFTL 246

Query: 475 -----------------YGPKFEYILKDAIGRDWQCGTIQ--VDFNLPS--------RFN 507
                            Y  ++   LK   G D+  GT+   +  N           R++
Sbjct: 247 GLNELKEVTTTLEVLGVYDSEYIINLKIIRGLDYYTGTVFETLLINNEEYGSICSGGRYD 306

Query: 508 AFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEY 567
               N  +     V I   +     R   ++ E          S ++ ++  I  + ++Y
Sbjct: 307 NLAENYTNNILPGVGISIGL----TRLFFVLKEIGFVESYKLPSKVEYLIIPIGDT-LKY 361

Query: 568 AQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGST 627
             E+   L     ++E  F ++ +  K+   +  +IP +I+ G++E + +SI I+   + 
Sbjct: 362 CGEVYKKLTESGKAVEMYFEDDKLKKKLNYANKLEIPYVILLGEEEEANKSINIKNMITG 421

Query: 628 TTQKVSLLD 636
             + +   D
Sbjct: 422 KQETLKFED 430


>gi|302339632|ref|YP_003804838.1| alanyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
 gi|301636817|gb|ADK82244.1| alanyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
          Length = 597

 Score = 71.4 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 33/139 (23%), Positives = 62/139 (44%), Gaps = 10/139 (7%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEK 124
           D        H+  H++ +A++ +  E     G  I  +   +DF   +  S +E+ ++E+
Sbjct: 450 DHSERTTALHTATHLLHKALRMVLGEHVQQKGSNITTERLRFDFVHPEKMSDEEVRRVEE 509

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLC 183
            + + I RD P   + +S ++AR          K          E V +Y  G++  ++C
Sbjct: 510 IVNQQIDRDLPVSMEMMSLDEARAAGALAFFESKY--------GEQVKVYSIGDFSKEVC 561

Query: 184 RGPHVRSTGQVKKFFKLMK 202
            GPHV  TGQ+ +F    +
Sbjct: 562 GGPHVEHTGQLGRFKITKE 580


>gi|46143183|ref|ZP_00135707.2| COG0441: Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
          Length = 85

 Score = 71.4 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 45/86 (52%), Positives = 55/86 (63%), Gaps = 2/86 (2%)

Query: 141 LSHEKARELFESKKEAYKVEIL-ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFK 199
           +S ++AR+ FE + E YK+ IL E+I       LY   E+ D+CRGPHV +      F K
Sbjct: 1   MSWQEARDTFEKRGEPYKMAILDENIERTATPALYHHEEYIDMCRGPHVPNMRFCHHF-K 59

Query: 200 LMKVAGAYWRGDSNRPMLSRIYGTAW 225
           L KVAGAYWRGDS   ML RIYGTAW
Sbjct: 60  LQKVAGAYWRGDSKNKMLQRIYGTAW 85


>gi|325851859|ref|ZP_08171024.1| glycine--tRNA ligase [Prevotella denticola CRIS 18C-A]
 gi|325484701|gb|EGC87614.1| glycine--tRNA ligase [Prevotella denticola CRIS 18C-A]
          Length = 515

 Score = 71.4 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 60/342 (17%), Positives = 113/342 (33%), Gaps = 60/342 (17%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        + +      L+P    G    F +  K+   +LP  + + G  +RNE  
Sbjct: 194 FNLMFSTEVGASAEATNKIYLRPETAQGIFVNFLNVQKTGRMKLPFGICQIGKAFRNEIV 253

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
            +   + R+R F Q +   FC    E  + E  K H L        G E        +  
Sbjct: 254 -ARQFVFRMREFEQMEMQFFCQPGTEMKWFEYWKKHRLAWHEALGMGDENYRFHDHEKLA 312

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
                    + A +I            +  +  G    EG      F+      + +  +
Sbjct: 313 HYA------NAATDI------------EFHMPFGFKEVEGIHSRTDFD------LSQHEK 348

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK--------- 543
               Q+ +  P R         +E   P  +  ++ G    F+ +M  ++          
Sbjct: 349 FSGRQIKYFDPER---------NESYTPYDVETSI-GVDRMFLSVMCHSYTEEQLENGSS 398

Query: 544 ---GNLPLWLSPIQAIVTTITSSAV--EYAQEIANLLKSH---HLSIETDFRNETINYKI 595
                LP  L+P++  V  + +     E AQEI N LK H   H+  +     ++I  + 
Sbjct: 399 RVVLKLPEPLAPVKCAVLPLVNKDGLPEKAQEIVNSLKFHFNTHMEAK-----DSIGKRY 453

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
           R       P  +       ++ ++ +R   S   ++V +   
Sbjct: 454 RRQDAIGTPFCVTVDGDTLNDNTVTLRYRDSMKQERVPVEKL 495


>gi|254421409|ref|ZP_05035127.1| seryl-tRNA synthetase [Synechococcus sp. PCC 7335]
 gi|196188898|gb|EDX83862.1| seryl-tRNA synthetase [Synechococcus sp. PCC 7335]
          Length = 449

 Score = 71.4 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 34/178 (19%), Positives = 63/178 (35%), Gaps = 16/178 (8%)

Query: 272 GWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G  + ++LIS+M  R  +  Y EI  P +++    Q SG    +  + F          D
Sbjct: 197 GAALERSLISFMLDRHTRAGYTEILPPILVNSESMQGSGQLPKFAEDGFKC--------D 248

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
                L P        +    + +  ELP+    +   +R E         GL+R+  F 
Sbjct: 249 RDDLWLTPTAEVPLTNLHRDEVLASDELPLNYCAYTPCFRREAGSYGRDTRGLIRLHQFN 308

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALW 441
           + + + F   E  F+E  K+      I +       +++L +              +W
Sbjct: 309 KVEMYKFVHPETSFDELEKLTADAEDILQQLKLPYRVIELCSGDLGFNATKTYDLEVW 366


>gi|171920831|ref|ZP_02695914.2| glycyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str. ATCC
           33698]
 gi|185179000|ref|ZP_02964750.1| glycyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str. ATCC
           27817]
 gi|188024105|ref|ZP_02996845.1| glycyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str. ATCC
           27819]
 gi|188518323|ref|ZP_03003837.1| glycyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str. ATCC
           33695]
 gi|188524322|ref|ZP_03004359.1| glycyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str. ATCC
           33696]
 gi|195867966|ref|ZP_03079963.1| glycyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str. ATCC
           33175]
 gi|198273368|ref|ZP_03205904.1| glycyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str. ATCC
           27816]
 gi|209554580|ref|YP_002284940.1| glycyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str. ATCC
           33699]
 gi|225550997|ref|ZP_03771943.1| glycine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
 gi|238064857|sp|B5ZC00|SYG_UREU1 RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|171903603|gb|EDT49892.1| glycyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str. ATCC
           33698]
 gi|184209087|gb|EDU06130.1| glycyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str. ATCC
           27817]
 gi|188019155|gb|EDU57195.1| glycyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str. ATCC
           27819]
 gi|188998056|gb|EDU67153.1| glycyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str. ATCC
           33695]
 gi|195660057|gb|EDX53437.1| glycyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str. ATCC
           33696]
 gi|195660362|gb|EDX53622.1| glycyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str. ATCC
           33175]
 gi|198249888|gb|EDY74668.1| glycyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str. ATCC
           27816]
 gi|209542081|gb|ACI60310.1| glycyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str. ATCC
           33699]
 gi|225378812|gb|EEH01177.1| glycine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
          Length = 473

 Score = 71.4 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 58/356 (16%), Positives = 115/356 (32%), Gaps = 56/356 (15%)

Query: 311 WDSYRANMFAVKCADDTIKDLRTFAL-KPMNCPGHVAVFNHGLKSYR-ELPVRLAEFGSV 368
           W   R      K     I+D +     +P    G    F +  +S R  LP  +A+ G  
Sbjct: 143 WTEIRHFNLMFKTYQGVIEDAKNVVYLRPETAQGIFVNFKNVQRSMRLHLPFGIAQIGKS 202

Query: 369 YRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY-KDFGFEKIMVKL 427
           +RNE +   + + R R F Q +   F  +E  ++   K  N I +      G     ++ 
Sbjct: 203 FRNEITPG-NFIFRTREFEQMEIEFFLKEESAYDIFDKYLNQIENWLVSACGLSLNNLRK 261

Query: 428 STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA--FYGPKFEYILKD 485
              P+                    + + + S+  I+       G    YG  +      
Sbjct: 262 HEHPK--------------------EELSHYSKKTIDFEYNFLHGFSELYGIAY------ 295

Query: 486 AIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK-- 543
                     + V  NL  + +  Y +  +++ +   +     G       I+ E     
Sbjct: 296 -----RTNYDLSVHMNLSKK-DLTYFDEQTKEKYVPHVIEPSVGVERLLYAILTEATFIE 349

Query: 544 ----------GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
                      +L   L+P +  V  + +   + A+EI   +   ++S   D    +I  
Sbjct: 350 KLENDDERILMDLKYDLAPYKIAVMPLVNKLKDKAEEIYGKILDLNISATFDNSG-SIGK 408

Query: 594 KIREHSIKKIPIIIICGD----KEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           + R          +   D     +  + S  IR   S   +++ L +    L +++
Sbjct: 409 RYRRQDAIGTIYCLTI-DFDSLDDQQDPSFTIRERNSMAQKRIKLSELPLYLNQKA 463


>gi|15238286|ref|NP_196649.1| tRNA synthetase-related / tRNA ligase-related [Arabidopsis
           thaliana]
 gi|8979722|emb|CAB96843.1| putative protein [Arabidopsis thaliana]
 gi|332004222|gb|AED91605.1| tRNA synthetase/ligase-related protein [Arabidopsis thaliana]
          Length = 309

 Score = 71.4 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 16/112 (14%), Positives = 40/112 (35%), Gaps = 8/112 (7%)

Query: 540 ENFKGNLPLWLSPIQAIVT-------TITSSAVEYAQEIANLLKSHHLSIETDFRNE-TI 591
           ++     P  ++P+Q +V               +  + + + L    +  E D R+  + 
Sbjct: 93  DDKGLVFPPKVAPVQVVVIHVPIKGAADYQELCDACEAVESTLLGAGIRAEADIRDNYSC 152

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +K  +  +  +P+ I  G ++ +   + I    +     V   D I  +  
Sbjct: 153 GWKYADQELTGVPLRIETGPRDLANDQVRIVTRDNGAKMDVKRGDLIEQVKD 204


>gi|319939766|ref|ZP_08014123.1| seryl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
 gi|319811104|gb|EFW07415.1| seryl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
          Length = 425

 Score = 71.0 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 32/193 (16%), Positives = 72/193 (37%), Gaps = 16/193 (8%)

Query: 267 FWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD 325
           F+   G ++ + + ++M     K+ Y E+  P +++      +G +  ++ + F V   +
Sbjct: 165 FYKGLGARLERAIYNFMLDEHQKEGYTEVIPPYMVNHDSMFGTGQYPKFKEDTFEVSDTN 224

Query: 326 DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMR 382
                   + L P         +   +   ++LP+        +R+E   +     GL+R
Sbjct: 225 --------YVLIPTAEVPLTNYYRGEILDGKDLPIYFTAMSPSFRSEAGSAGRDTRGLIR 276

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSD 438
           +  F + +   F   E  + E  K+     +I +       +V LST             
Sbjct: 277 LHQFHKVEMVKFAKPEHSYEELEKMTANAENILQKLNLPYRVVALSTGDMGFSAAKTYDL 336

Query: 439 ALWDDAENIMKGV 451
            +W  A+N  + +
Sbjct: 337 EVWIPAQNTYREI 349


>gi|218961936|ref|YP_001741711.1| seryl-tRNA synthetase [Candidatus Cloacamonas acidaminovorans]
 gi|167730593|emb|CAO81505.1| seryl-tRNA synthetase [Candidatus Cloacamonas acidaminovorans]
          Length = 419

 Score = 71.0 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 52/295 (17%), Positives = 98/295 (33%), Gaps = 31/295 (10%)

Query: 242 EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRRKI--KDDYEEIN 295
             +DH +LA +  L  +       GSG   +  +G +I + LI++M      K +Y E+ 
Sbjct: 135 TPKDHLELAIQNKLLDLPRGAKISGSGFPLYTGEGARIERALINFMLEFHLQKHNYTELM 194

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
            P ++++     +G       +M+ +        +     L P        +F   + SY
Sbjct: 195 APVIVNRKTMTGTGQLPKLEEDMYRI--------EKDDLFLIPTAEVPVTNIFADEVLSY 246

Query: 356 RELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
           ++LP +   +   +R E         GL R+  F + +   F   E+      +I +   
Sbjct: 247 KDLPQKFVAYTPCFRREAGSYGKETKGLQRLHQFNKVELVHFTEPEKSAEALEQILSDAE 306

Query: 413 SIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
            I + F     +V L T       S   +D         L+     +   +    +   G
Sbjct: 307 DILQAFNLHYRVVALCTGDLSFA-SQKTYD---------LEVWAPGTGKYLEVSSVSTFG 356

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA----FYVNSHSEKCHPVMI 523
            F   +     KD  G+     T+        R        Y         P ++
Sbjct: 357 EFQARRANIRYKDKTGKVKHLHTLNGSGVATPRLLIAIWETYQQEDGTIKLPAVL 411


>gi|116329521|ref|YP_799241.1| histidyl-tRNA synthetase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116329836|ref|YP_799554.1| histidyl-tRNA synthetase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|122282389|sp|Q04WC4|SYH_LEPBJ RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|122282700|sp|Q04X87|SYH_LEPBL RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|116122265|gb|ABJ80308.1| Histidine--tRNA ligase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116123525|gb|ABJ74796.1| Histidine--tRNA ligase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 439

 Score = 71.0 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 72/432 (16%), Positives = 137/432 (31%), Gaps = 69/432 (15%)

Query: 268 WHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADD 326
           ++ +  ++   + S MR  +    YEE + P +    L++           +   +  D 
Sbjct: 19  FYPEEMRLRNWMFSIMRETVLSFGYEEYDGPILESFDLYKAKS-----GEEIVERQLYDF 73

Query: 327 TIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
             K  R  A++P   P    +    L++    PVR     +++R E  G      R+R  
Sbjct: 74  IDKGERRVAIRPEMTPTLARMVAGNLRNLPR-PVRWFSIPNLWRYEQPGK----GRLREH 128

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV-----GSDALW 441
            Q +  +F          L+I  +  SI K FG      ++     K +      S  L 
Sbjct: 129 WQLNVDLFGVDTHRAE--LEILLMADSILKKFGAPTGSYQIKVSHRKLLDSFLKNSLKLS 186

Query: 442 DDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY-------------------GPKFE-- 480
           D   + +  +LD     S +     +      F                     P  +  
Sbjct: 187 DHQVHGVSKLLDKKSKISPETFEAEIKPLLNNFNEQFSLIETYLASNLETVSTIPGIDPD 246

Query: 481 --------YILKDAIGRDWQC-----GTIQVDFNLPSRFNAFYVNSHSEK---CHPVMIH 524
                   +     +G D Q           D+     F  F  N  + +         +
Sbjct: 247 SIHFIRNLFQELGELGIDKQLVFDPSIIRGFDYYTGCIFEVFDTNPENRRSLYGGGRYDN 306

Query: 525 RAVFGSIERFIGI-----------MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQ-EIA 572
                S E+  GI            +EN   NL   LS  + +   I   ++     +++
Sbjct: 307 LIGLFSKEQLSGIGFGLGDVTLKSFLENH--NLIPDLSREKTLFLPIMDESIFVDTFKLS 364

Query: 573 NLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
             L+ + +  ET   +  I  +I+    K    ++  G+ E    ++ I+   S   + +
Sbjct: 365 KELRENGILTETMLDSAKIGKQIQVAEKKGYRYVLFLGESEIRTETVQIKDLVSGEQKSL 424

Query: 633 SLLDAIPILTKE 644
                  IL K+
Sbjct: 425 PRKGLSDILKKD 436


>gi|87309331|ref|ZP_01091467.1| glycyl-tRNA synthetase [Blastopirellula marina DSM 3645]
 gi|87287970|gb|EAQ79868.1| glycyl-tRNA synthetase [Blastopirellula marina DSM 3645]
          Length = 536

 Score = 71.0 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 58/372 (15%), Positives = 113/372 (30%), Gaps = 35/372 (9%)

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
             QVL     +     +    N+           +  +  L+P    G    F + + S 
Sbjct: 172 FAQVLGPDAKELGTLTEPREYNLMFKTTVGALGGEENSAYLRPETAQGIFVNFKNVVDSS 231

Query: 356 R-ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           R  +P  +A+ G  +RNE +   +   R R F Q +   FC      +      N     
Sbjct: 232 RVRIPFGIAQVGKSFRNEITPR-NFTFRSREFEQMEIEFFCHPSSSADWYTYWRNRRFQW 290

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAF 474
           Y D G     ++L         SD L   +                     G L G    
Sbjct: 291 YLDMGLAGDKLRLREHH-----SDELSHYSTGT---ADIEYAFPFLPTGEYGELEGIAHR 342

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF-----NAFYVNSHSEKCHPVMIHRAVFG 529
                   ++  +  +    T+++D N   +      +  Y +  + +     +     G
Sbjct: 343 GDFDLRSHMEGKLDPNSNPLTLELDANGKPKHRGSGKDLTYRDDLTNERFTPHVVEPSAG 402

Query: 530 SIERFIGIMIENFK----------------GNLPLWLSPIQAIV--TTITSSAVEYAQEI 571
           +    +  + E +                   L   ++PI+A V          E +Q+I
Sbjct: 403 ADRATLAFLCEAYTEDEAPDENGKLQSRLVMKLHPRIAPIKAAVFPLVKKDGMPEMSQDI 462

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
              LK    ++  D +   +  + R       P  I    +  ++ ++ IR   +    +
Sbjct: 463 YRALKKK-FNVFYDEKGA-VGRRYRRQDEAGTPFCITVDGQSITDGTVTIRHRDTLEQWR 520

Query: 632 VSLLDAIPILTK 643
           V   D +  + K
Sbjct: 521 VKQDDVVAEIDK 532


>gi|86141018|ref|ZP_01059577.1| glycyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217]
 gi|85832960|gb|EAQ51409.1| glycyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217]
          Length = 511

 Score = 71.0 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 60/376 (15%), Positives = 120/376 (31%), Gaps = 32/376 (8%)

Query: 274 KIFQTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRA-NMFAVKCADDTIKDLR 332
            + Q +   +  +   D  +    ++        S +W   R  N+        + +   
Sbjct: 153 TVLQRMARSLEAEDLAD-VKALIEELGIADPDTGSKNWTDVRQFNLMFGTKLGASAETAT 211

Query: 333 TFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
              L+P    G    F +  K+   ++P  +A+ G  +RNE   +   + R+R F Q + 
Sbjct: 212 DLYLRPETAQGIFVNFLNVQKTGRMKIPFGIAQTGKAFRNEIV-ARQFIFRMREFEQMEM 270

Query: 392 HVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMK 449
             F     E  + E  K   L   +    G E        +      + A  +       
Sbjct: 271 QFFVRPGDELKWYEHWKETRLKWHLSLGLGEENYRFHDHEKLAHYANAAADIEFDFPFGF 330

Query: 450 GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAF 509
             L+ I + +   +          F G K ++   D    +     +        R    
Sbjct: 331 KELEGIHSRTDFDLKAHEE-----FSGKKLQFF--DPELNENYVPYVVETSIGLDRMFLA 383

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTI--TSSAVEY 567
             +   E+           GS    +          LP  L+P++A +  +       E 
Sbjct: 384 VFSKSLEEEELEN------GSTRTVL---------KLPAILAPVKAAILPLVKKDGLPEV 428

Query: 568 AQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGST 627
           AQ+I + LK    ++  D ++  +  + R       P  I        + S+ IR   + 
Sbjct: 429 AQKIIDDLK-FDFNVAYDEKDA-VGRRYRRQDAAGTPFCITVDHDTLEDESVTIRDRDTM 486

Query: 628 TTQKVSLLDAIPILTK 643
             ++V + +   IL +
Sbjct: 487 EQKRVKISELATILHE 502


>gi|320449890|ref|YP_004201986.1| glycyl-tRNA synthetase [Thermus scotoductus SA-01]
 gi|320150058|gb|ADW21436.1| glycyl-tRNA synthetase [Thermus scotoductus SA-01]
          Length = 506

 Score = 71.0 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 58/378 (15%), Positives = 103/378 (27%), Gaps = 91/378 (24%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            NM           +     L+P    G    F + L S  R+LP  +A+ G  +RNE +
Sbjct: 166 FNMMFKTYVGPVEDEASLAYLRPETAQGIFVNFKNVLDSTSRKLPFGIAQIGKAFRNEIT 225

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              + + RVR F Q +   F                                        
Sbjct: 226 PR-NFIFRVREFEQMEIEYFVRP------------------------------------- 247

Query: 435 VGSDALWDDA--ENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG-PKFEYILKDAIGRDW 491
            G D  W     E  ++     +  S  + +       E A Y     + + +   G + 
Sbjct: 248 -GEDEYWHRYWVEERLRW-WQEMGLSRDNLVPYEQPPEELAHYAKATVDILYRFPHGLEE 305

Query: 492 QCGT-------IQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
             G        +                  +E     + +R    +   F+  +IE   G
Sbjct: 306 LEGIANRTDFDLGSHTKDQEELGITARVLKNEHSTARLAYRDP-DTGRWFVPYVIEPSAG 364

Query: 545 ---------------------------NLPLWLSPIQAIVTTIT---SSAVEYAQEIANL 574
                                       L   L+PI+  V  +        EYA+ +   
Sbjct: 365 VDRGVLALLSEAFTREELPNGEERIVLKLKPQLAPIKVAVIPLVRNRPEITEYAKRLKAR 424

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIIC-----GD-KEASER---SIGIRRFG 625
           L++  L          I    R H     P  I       G  K+ + R   ++ +R   
Sbjct: 425 LQALGLGRILYEDTGNIGKAYRRHDEVGTPFAITVDYDTIGQSKDGTTRLKDTVTVRDRD 484

Query: 626 STTTQKVSLLDAIPILTK 643
           +    ++ + +    L +
Sbjct: 485 TMEQIRLHVEELEGFLRE 502


>gi|221231277|ref|YP_002510429.1| seryl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669]
 gi|254783052|sp|B8ZLH8|SYS_STRPJ RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|220673737|emb|CAR68236.1| seryl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669]
          Length = 424

 Score = 71.0 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 52/368 (14%), Positives = 120/368 (32%), Gaps = 51/368 (13%)

Query: 106 YDFDKEQPFSSDELAQIEKKMQEIIARDSPF---------LKQYLSHEKARELFESKKEA 156
           ++   E+  +    A +  +M+EI A+              +  +S E A+     +   
Sbjct: 11  FEAVTEKLATRGVDAAVLNEMKEIDAKRRNILVKVETLKAERNTVSAEIAQAKRNKENTD 70

Query: 157 YKVEILESIPA-----KENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGD 211
            K+  ++++ A        +              P++ +        +   V    W   
Sbjct: 71  DKIAAMQNLSAEVKALDAELAEIDAKLTEFTTTLPNIPADSVPVGADEDDNVEVRRW--- 127

Query: 212 SNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRK 271
                     GT      E   +    E+    D  +  +      +        F+   
Sbjct: 128 ----------GTPREFDFEPKAHWDLGEDLGILDWERGGKVTGARFL--------FYKGL 169

Query: 272 GWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G ++ + + ++M     K+ Y E+ TP +++      +G +  ++ + F +   +     
Sbjct: 170 GARLERAIYNFMLDEHGKEGYTEVITPYIVNHDSMFGTGQYPKFKEDTFELSDTN----- 224

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFT 387
              F L P         +   +   ++LP+        +R+E   +     GL+R+  F 
Sbjct: 225 ---FVLIPTAEVPLANYYRDEILDGKDLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFH 281

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +   F   E+ + E  K+     +I +       +V LST              +W  
Sbjct: 282 KVEMVKFAKPEESYEELEKMTANAENILQKLNLPYRVVALSTGDMGFSAAKTYDLEVWIP 341

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 342 AQNNYREI 349


>gi|332970285|gb|EGK09277.1| serine--tRNA ligase [Kingella kingae ATCC 23330]
          Length = 471

 Score = 71.0 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 42/222 (18%), Positives = 77/222 (34%), Gaps = 14/222 (6%)

Query: 242 EKRDHRKLAREMDL-FHIAEDGSGVIFWHRKG--WKIFQTLISYMRRKI--KDDYEEINT 296
           E +DH  L   + L F  A + SG  F   KG   ++ + L  +M      +  Y E  T
Sbjct: 176 EIKDHVDLGAALGLDFEKAAELSGARFSLMKGKIARLHRALAQFMLDTHTQQHGYTECYT 235

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P ++       +G    +  ++F V    D  K  +     P             + S  
Sbjct: 236 PYIVSDSTLLGTGQLPKFGEDLFHVTRGGDESKLTQYLI--PTAEVTLTNTVRDEILSLN 293

Query: 357 ELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           +LP++L      +R+E         GL+R   F + +       E+ +    ++     +
Sbjct: 294 DLPMKLTAHSPCFRSEAGSHGKDTRGLIRQHQFDKVEMVQIVQPEKSYEALEEMVTHAEN 353

Query: 414 IYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
           I K       ++ L T              +W  A+N  + +
Sbjct: 354 ILKLLELPYRVITLCTGDMGFGATKTYDLEVWVPAQNTYREI 395


>gi|225550693|ref|ZP_03771642.1| glycine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
 gi|225379847|gb|EEH02209.1| glycine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
          Length = 473

 Score = 71.0 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 61/356 (17%), Positives = 114/356 (32%), Gaps = 56/356 (15%)

Query: 311 WDSYRANMFAVKCADDTIKDLRTFAL-KPMNCPGHVAVFNHGLKSYR-ELPVRLAEFGSV 368
           W   R      K     I+D +     +P    G    F +  +S R  LP  +A+ G  
Sbjct: 143 WTEIRHFNLMFKTYQGVIEDAKNVVYLRPETAQGIFVNFKNVQRSMRLHLPFGIAQIGKS 202

Query: 369 YRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY-KDFGFEKIMVKL 427
           +RNE +   + + R R F Q +   F  +E  ++   K  N I +      G     ++ 
Sbjct: 203 FRNEITPG-NFIFRTREFEQMEIEFFLKEESAYDIFDKYLNQIENWLVSACGLSLNNLRK 261

Query: 428 STRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGA--FYGPKFEYILKD 485
              P+                    + + + S+  I+       G    YG  +      
Sbjct: 262 HEHPK--------------------EELSHYSKKTIDFEYNFLHGFSELYGIAY------ 295

Query: 486 AIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK-- 543
                     + V  NL  +   ++     EK  P +I     G       I+ E     
Sbjct: 296 -----RTNYDLSVHMNLSKKDLTYFDGQTKEKYVPHVIE-PSVGVERLLYAILTEATFIE 349

Query: 544 ----------GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
                      +L   L+P +  V  + +   + A+EI   +   ++S   D    +I  
Sbjct: 350 KLENDDERILMDLKYDLAPYKIAVMPLVNKLKDKAEEIYGKILDLNISATFDNSG-SIGK 408

Query: 594 KIREHSIKKIPIIIICGD----KEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           + R          +   D     +  + S  IR   S   +++ L +    L +++
Sbjct: 409 RYRRQDAIGTIYCLTI-DFDSLDDQQDPSFTIRERNSMAQKRIKLSELPLYLNQKA 463


>gi|149921717|ref|ZP_01910165.1| glycyl-tRNA synthetase [Plesiocystis pacifica SIR-1]
 gi|149817455|gb|EDM76927.1| glycyl-tRNA synthetase [Plesiocystis pacifica SIR-1]
          Length = 508

 Score = 71.0 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 55/350 (15%), Positives = 116/350 (33%), Gaps = 49/350 (14%)

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEP 373
             +  A++ A D   +     L+P    G    F +  +S   ++P  +A+ G  +RNE 
Sbjct: 180 GGDDKAIRKAVDAALEESAVYLRPETAQGMFVQFLNVQQSMAAKIPFGIAQMGKSFRNEV 239

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
           +   H + R   F Q +   FC                +  ++  G     ++L      
Sbjct: 240 TVE-HFIFRSCEFEQMEMEWFCEPGTGREWLEYWKETRMKWWQSIGLSADKLRLREHESS 298

Query: 434 RV--GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDW 491
            +   SD  +D                 +     G    EG      ++     A G + 
Sbjct: 299 ELAHYSDGTFDV----------------EYDFPWGWDELEGIASRTNYDLNA-HAEGSNK 341

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIH--RAVFGSIERFIGIMI---------E 540
           +      + + P            +K    + H      G+    + ++          E
Sbjct: 342 KLVYTDPEKDNPET---------GKKGWRYVPHVVEPAAGATRGMLAVLCAAYDEEPGDE 392

Query: 541 NFKG-----NLPLWLSPIQAIVTTITSSAV--EYAQEIANLLKSHHLSIETDFRNETINY 593
           + KG      L   L+P++A V  +       E A++IA+   +  ++ + D ++  I  
Sbjct: 393 SGKGARTVLRLHPRLAPVKAAVLPLVRKQGMPETARKIADAFFAAGVNAKLDMQHA-IGR 451

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +   H     P  I    + A + ++ IR       +++ +  A+  + +
Sbjct: 452 RYARHDEIGTPYCITVDGQTAEDDTVTIRYRDDRRQERIKVEAAVDEVRR 501


>gi|315222160|ref|ZP_07864069.1| seryl-tRNA synthetase [Streptococcus anginosus F0211]
 gi|315188786|gb|EFU22492.1| seryl-tRNA synthetase [Streptococcus anginosus F0211]
          Length = 425

 Score = 71.0 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 72/193 (37%), Gaps = 16/193 (8%)

Query: 267 FWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD 325
           F+   G ++ + + ++M     K+ Y E+  P +++      +G +  ++ + F +   +
Sbjct: 165 FYKGLGARLERAIYNFMLDEHQKEGYTEVIPPYMVNHDSMFGTGQYPKFKEDTFELSDTN 224

Query: 326 DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMR 382
                   + L P         +   +   ++LP+        +R+E   +     GL+R
Sbjct: 225 --------YVLIPTAEVPLTNYYRGEILDGKDLPIYFTAMSPSFRSEAGSAGRDTRGLIR 276

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSD 438
           +  F + +   F   E  + E  K+     +I +       +V LST             
Sbjct: 277 LHQFHKVEMVKFAKPEHSYEELEKMTANAENILQKLNLPYRVVALSTGDMGFSAAKTYDL 336

Query: 439 ALWDDAENIMKGV 451
            +W  A+N  + +
Sbjct: 337 EVWIPAQNTYREI 349


>gi|312143796|ref|YP_003995242.1| alanyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
 gi|311904447|gb|ADQ14888.1| alanyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
          Length = 877

 Score = 71.0 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 32/150 (21%), Positives = 65/150 (43%), Gaps = 10/150 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFS 115
            S++ +  +D R      HS  H++ + ++ +  E     G  +  +   +DF      S
Sbjct: 547 DSVKAVVYDDRRKATARHHSATHLLHKTLKEVLGEHVNQSGSLVAPEKLRFDFTHFSALS 606

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
             EL +IEK++ + +  + P   +  + E+A+ +          E L      E V + +
Sbjct: 607 DQELNEIEKRINKAVMENYPVETEEKALEEAKAMG--------AEALFGEKYDEEVRVVK 658

Query: 176 QGEW-FDLCRGPHVRSTGQVKKFFKLMKVA 204
            G++  +LC G HV +TG +  F  + +  
Sbjct: 659 MGDYSLELCGGTHVDATGDIGPFKIISESG 688


>gi|225012118|ref|ZP_03702555.1| glycyl-tRNA synthetase [Flavobacteria bacterium MS024-2A]
 gi|225003673|gb|EEG41646.1| glycyl-tRNA synthetase [Flavobacteria bacterium MS024-2A]
          Length = 513

 Score = 71.0 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 56/344 (16%), Positives = 112/344 (32%), Gaps = 50/344 (14%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        + +      L+P    G    F +  K+   +LP  +A+ G  +RNE  
Sbjct: 195 FNLMFGTKLGASAESAMDLYLRPETAQGIFVNFLNVQKTGRMKLPFGIAQTGKAFRNEIV 254

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
            +   + R+R F Q +   F                 ++ + + G  K   +     +  
Sbjct: 255 -ARQFIFRMREFEQMEMQFFIPPGTQKGWYEHWKETRLNWHLNLGMGKDNYRFHDHEKLA 313

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
             +DA  D                 + R   G    EG      F+     +    +   
Sbjct: 314 HYADAASDI----------------EFRFPFGFKELEGIHSRTDFDL----SSHEKFTGK 353

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI--------MIENFKG-- 544
            +Q     P R         +E   P ++  ++ G    F+ +        ++E+     
Sbjct: 354 KLQYFD--PER---------NENYVPYVVETSI-GLDRMFLAVFSNALKEEVLEDGSTRT 401

Query: 545 --NLPLWLSPIQAIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              LP  LSP +  V  +       E A+ I + LK    S   D ++  +  + R    
Sbjct: 402 VLKLPPALSPTKVAVLPLVKKDGLPELARSIVDELK-WSFSTNYDEKDA-VGRRYRRQDA 459

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
              P  I    +   ++++ +R   S   +++ + D    +T +
Sbjct: 460 LGTPYCITVDHQSLEDQTVTLRERDSMLQERIGISDLEKAITAQ 503


>gi|294789503|ref|ZP_06754739.1| serine--tRNA ligase [Simonsiella muelleri ATCC 29453]
 gi|294482583|gb|EFG30274.1| serine--tRNA ligase [Simonsiella muelleri ATCC 29453]
          Length = 430

 Score = 71.0 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 42/245 (17%), Positives = 79/245 (32%), Gaps = 14/245 (5%)

Query: 219 RIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDL-FHIAEDGSGVIFWHRKG--WKI 275
            I        +          + + +DH  L   + L F  A   SG  F   KG   ++
Sbjct: 114 PIGKDETENVEVRKVGTPRQFDFDIKDHVDLGAALGLDFEKAAQLSGARFSLMKGKVARL 173

Query: 276 FQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
            + L  +M      +  Y E  TP ++       +G    +  ++F V    D  K  + 
Sbjct: 174 HRALAQFMLDTHTTQHGYTECYTPYIVSDSTLLGTGQLPKFGEDLFHVTRGGDETKLTQY 233

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDD 390
               P             + S  +LP++L      +R+E         GL+R   F + +
Sbjct: 234 LI--PTAEVTLTNTVRDEVLSPHDLPMKLTAHSPCFRSEAGSHGKDTRGLIRQHQFDKVE 291

Query: 391 AHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAEN 446
                  E+ +    ++     +I K       ++ L T              +W  A+N
Sbjct: 292 MVQIVQPEKSYEALEEMVGHAENILKLLELPYRVITLCTGDMGFGATKTYDLEVWVPAQN 351

Query: 447 IMKGV 451
             + +
Sbjct: 352 TYREI 356


>gi|328464544|gb|EGF35915.1| seryl-tRNA synthetase [Lactobacillus helveticus MTCC 5463]
          Length = 435

 Score = 71.0 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 77/188 (40%), Gaps = 9/188 (4%)

Query: 272 GWKIFQTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G  + + + ++ +    KD Y E+  P +++    Q +G +  +  +++ +   DD  K 
Sbjct: 170 GALLERAVFNFFLDENTKDGYTEVIPPYLVNDASMQGTGQFPKFHEDVYTIVDNDDPDKP 229

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFT 387
            R   L P      V  F + +    +LP+ +      +R+E   +     GL+R+  F 
Sbjct: 230 -RDLTLIPTAEVPLVNYFRNEIIHENKLPINVTALSQAFRSEAGSAGRDTRGLIRMHEFR 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +    C  ++ ++E  K+ +    + +  G    +V LST              +W  
Sbjct: 289 KVEMVKVCKPDESWDELEKLTHNAEHLLQKLGLPYHVVALSTGDASFTSAKTYDLEVWMP 348

Query: 444 AENIMKGV 451
           A++  + +
Sbjct: 349 AQDKYREI 356


>gi|227504561|ref|ZP_03934610.1| glycyl-tRNA synthetase [Corynebacterium striatum ATCC 6940]
 gi|227198881|gb|EEI78929.1| glycyl-tRNA synthetase [Corynebacterium striatum ATCC 6940]
          Length = 459

 Score = 71.0 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 56/386 (14%), Positives = 127/386 (32%), Gaps = 53/386 (13%)

Query: 277 QTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF-A 335
             L +Y  +     +E  N    ++     Q G W   +A    +K     + D +    
Sbjct: 101 HLLEAYEEKH---GHEPANGLADINDPETGQPGDWTEPKAFSGLLKTFLGPVDDEQGLHY 157

Query: 336 LKPMNCPGHVAVFNHGLKSYR-ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           L+P    G    F + + S R + P  +A  G  +RNE +   + + R R F Q +   F
Sbjct: 158 LRPETAQGIFVNFKNVMTSARMKPPFGIANIGKSFRNEITPG-NFIFRTREFEQMEMEFF 216

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDT 454
               +         +   + Y D G ++  ++L   P+                    + 
Sbjct: 217 VKPGEDEQWHQYWIDDRYNWYVDLGIKEENLRLYEHPK--------------------EK 256

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH 514
           + + S+  ++     G   F G K+   L+    R     ++    +     +  Y +  
Sbjct: 257 LSHYSKRTVDVEYAFG---FTGSKWG-ELEGVANRTDYDLSVHAKGSGE---DLSYYDQT 309

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW----------------LSPIQAIVT 558
           +E+     +     G     +  +++ +                       L+P++  V 
Sbjct: 310 TEERWVPYVIEPAAGLGRSMMAFLVDAYDEEEVPNSKGGTDKRVVLRLDRRLAPVKVAVL 369

Query: 559 TIT--SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASE 616
            ++        A+E+A  L+  + +++ D     I  + R       P  +        +
Sbjct: 370 PLSKKEELANPARELAAKLR-MNWNVDYDTSGA-IGRRYRRQDEIGTPFCVTYDFDSLED 427

Query: 617 RSIGIRRFGSTTTQKVSLLDAIPILT 642
            ++ +R   +   ++V + +    L 
Sbjct: 428 GAVTVRERDTMEQERVKIDELEAYLA 453


>gi|260102998|ref|ZP_05753235.1| serine-tRNA ligase [Lactobacillus helveticus DSM 20075]
 gi|260083209|gb|EEW67329.1| serine-tRNA ligase [Lactobacillus helveticus DSM 20075]
          Length = 457

 Score = 71.0 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 77/188 (40%), Gaps = 9/188 (4%)

Query: 272 GWKIFQTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G  + + + ++ +    KD Y E+  P +++    Q +G +  +  +++ +   DD  K 
Sbjct: 192 GALLERAVFNFFLDENTKDGYTEVIPPYLVNDASMQGTGQFPKFHEDVYTIVDNDDPDKP 251

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFT 387
            R   L P      V  F + +    +LP+ +      +R+E   +     GL+R+  F 
Sbjct: 252 -RDLTLIPTAEVPLVNYFRNEIIHENKLPINVTALSQAFRSEAGSAGRDTRGLIRMHEFR 310

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +    C  ++ ++E  K+ +    + +  G    +V LST              +W  
Sbjct: 311 KVEMVKVCKPDESWDELEKLTHNAEHLLQKLGLPYHVVALSTGDASFTSAKTYDLEVWMP 370

Query: 444 AENIMKGV 451
           A++  + +
Sbjct: 371 AQDKYREI 378


>gi|332522516|ref|ZP_08398768.1| serine--tRNA ligase [Streptococcus porcinus str. Jelinkova 176]
 gi|332313780|gb|EGJ26765.1| serine--tRNA ligase [Streptococcus porcinus str. Jelinkova 176]
          Length = 425

 Score = 71.0 bits (172), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 74/193 (38%), Gaps = 16/193 (8%)

Query: 267 FWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD 325
           F+   G ++ + L ++M     K+ Y+EI  P +++      +G +  ++ + F +   +
Sbjct: 165 FYKNLGARLERALYNFMLDEHAKEGYQEIIPPYMVNHDSMFGTGQYPKFKEDTFELADTN 224

Query: 326 DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMR 382
                   F L P         +   +   +ELP+        +R+E   +     GL+R
Sbjct: 225 --------FVLIPTAEVPLTNYYRGEILDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIR 276

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSD 438
           +  F + +   F   E+ ++E  K+     +I +       ++ L T             
Sbjct: 277 LHQFHKVEMVKFAKPEESYDELEKMTANAENILQKLNLPYRVITLCTGDMGFSAAKTYDV 336

Query: 439 ALWDDAENIMKGV 451
            +W  A+N  + +
Sbjct: 337 EVWIPAQNTYREI 349


>gi|153853058|ref|ZP_01994467.1| hypothetical protein DORLON_00452 [Dorea longicatena DSM 13814]
 gi|149753844|gb|EDM63775.1| hypothetical protein DORLON_00452 [Dorea longicatena DSM 13814]
          Length = 887

 Score = 71.0 bits (172), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 62/143 (43%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFS 115
             + +   ++ R+LA   HS  H++ +A++ +        G         +DF      +
Sbjct: 556 DKVTLKVDKENRALAENNHSATHLLQKALRMVLGNHVEQAGSLNNAQRLRFDFTHFSAMT 615

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           ++EL ++E  + E I  + P + + +  E+A++   +     K          + V +  
Sbjct: 616 AEELQKVEDIVNEKIRENLPVVIKNMPIEEAKKTGAAALFGEKY--------GDIVRVVS 667

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G++  + C G HV++TG +  F
Sbjct: 668 MGDFSIEFCGGTHVKNTGNIMAF 690


>gi|149007999|ref|ZP_01831556.1| seryl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74]
 gi|225856139|ref|YP_002737650.1| seryl-tRNA synthetase [Streptococcus pneumoniae P1031]
 gi|225858264|ref|YP_002739774.1| seryl-tRNA synthetase [Streptococcus pneumoniae 70585]
 gi|254783048|sp|C1C5E8|SYS_STRP7 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|254783496|sp|C1CIR2|SYS_STRZP RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|147760511|gb|EDK67487.1| seryl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74]
 gi|225721092|gb|ACO16946.1| seryl-tRNA synthetase [Streptococcus pneumoniae 70585]
 gi|225725287|gb|ACO21139.1| seryl-tRNA synthetase [Streptococcus pneumoniae P1031]
 gi|332076855|gb|EGI87317.1| seryl-tRNA synthetase [Streptococcus pneumoniae GA17545]
 gi|332204437|gb|EGJ18502.1| seryl-tRNA synthetase [Streptococcus pneumoniae GA47901]
          Length = 424

 Score = 71.0 bits (172), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 51/354 (14%), Positives = 115/354 (32%), Gaps = 51/354 (14%)

Query: 120 AQIEKKMQEIIARDSPF---------LKQYLSHEKARELFESKKEAYKVEILESIPA--- 167
           A +  +M+EI A+              +  +S E A+     +    K+  ++++ A   
Sbjct: 25  AAVLNEMKEIDAKRRNILVKVETLKAERNTVSAEIAQAKRNKENTDDKIAAMQNLSAEVK 84

Query: 168 --KENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAW 225
                +              P++ +        +   V    W             GT  
Sbjct: 85  ALDAELAEIDAKLTEFTTTLPNIPADSVPVGADEDDNVEVRRW-------------GTPR 131

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYM-R 284
               E   +    E+    D  +  +      +        F+   G ++ + + ++M  
Sbjct: 132 EFDFEPKAHWDLGEDLGILDWERGGKVTGARFL--------FYKGLGARLERAIYNFMLD 183

Query: 285 RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
              K+ Y E+ TP +++      +G +  ++ + F +   +        F L P      
Sbjct: 184 EHGKEGYTEVITPYIVNHDSMFGTGQYPKFKEDTFELSDTN--------FVLIPTAEVPL 235

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMF 401
              +   +   ++LP+        +R+E   +     GL+R+  F + +   F   E+ +
Sbjct: 236 ANYYRDEILDGKDLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESY 295

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
            E  K+     +I +       +V LST              +W  A+N  + +
Sbjct: 296 EELEKMTANAENILQKLNLPYRVVALSTGDMGFSAAKTYDLEVWIPAQNNYREI 349


>gi|291296240|ref|YP_003507638.1| glycyl-tRNA synthetase [Meiothermus ruber DSM 1279]
 gi|290471199|gb|ADD28618.1| glycyl-tRNA synthetase [Meiothermus ruber DSM 1279]
          Length = 508

 Score = 71.0 bits (172), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 50/345 (14%), Positives = 108/345 (31%), Gaps = 24/345 (6%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPS 374
            NM           +     L+P    G    F + L  + R LP  +A+ G  +RNE +
Sbjct: 167 FNMMFKTQIGPVADEDSYGYLRPETAQGIFINFKNVLDATSRRLPFGVAQIGKAFRNEIT 226

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              + + RVR F Q +   F           +     ++ ++  G  +  +++   P++ 
Sbjct: 227 PR-NFIFRVREFEQMEIEYFVKPGTDEEWHQRWLEARLAWWEAQGIPREQIRVLDVPKE- 284

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAI--GRDWQ 492
               + +      +     T+     + I        G+    + E  ++  +    D  
Sbjct: 285 --DLSHYSKRTFDLMYNFPTLGFEEIEGIANRSDYDLGSHTKGQAELKIQARVLENHDST 342

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
                 D      F  F +   +     V+   +   + E+      E     L   L+P
Sbjct: 343 AKLAVQDPETKEWFVPFVIEPSAGVDRGVLAVLSQAYTREKLENG-EERIVLKLKPHLAP 401

Query: 553 IQAIVTT---ITSSAVEYAQEIANLLKSHHL-SIETDFRNETINYKIREHSIKKIPIIII 608
           I+  V            YA+ +   L++     +  +     I    R H     P  + 
Sbjct: 402 IKVAVIPLAKNKEEITSYARRLKADLQALGFGRVLYEDTGN-IGKAYRRHDEVGTPFCVT 460

Query: 609 C----------GDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
                      G     + ++ +R   +   ++V++ +    L +
Sbjct: 461 VDYDTIGKSQDGSTALQD-TVTVRDRDTMQQERVAVKELPQYLLE 504


>gi|256830944|ref|YP_003159672.1| alanyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
 gi|256580120|gb|ACU91256.1| alanyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
          Length = 879

 Score = 71.0 bits (172), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 33/149 (22%), Positives = 63/149 (42%), Gaps = 7/149 (4%)

Query: 52  DPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDK 110
           + + +  +E+   E  R      HS  H++  A++ +  E     G ++      +DF  
Sbjct: 546 EILADQEVELFVEEGERIATARNHSTTHLLHAALRRVLGEHVKQAGSLVGPSRLRFDFTH 605

Query: 111 EQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN 170
               S +EL Q+E ++   I  D+P + Q +S++ A +  ++        +       + 
Sbjct: 606 ISGLSPEELRQVEDEVNRAILADAPIVTQVMSYDAAVQQKQAM------ALFGEKYEADV 659

Query: 171 VTLYRQGEWFDLCRGPHVRSTGQVKKFFK 199
             +   GE  +LC G H+ STGQ   F  
Sbjct: 660 RVVEMAGESVELCGGTHLASTGQAGSFAL 688


>gi|116331894|ref|YP_801612.1| alanine--tRNA ligase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|122280371|sp|Q04QG6|SYA_LEPBJ RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|116125583|gb|ABJ76854.1| Alanine--tRNA ligase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 940

 Score = 71.0 bits (172), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 29/139 (20%), Positives = 61/139 (43%), Gaps = 10/139 (7%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGF-YYDFDKEQPFSSDELAQIEKKM 126
           R      HS  H++  A++++  +  +  G ++   +  +DF      +S E+ +IE  +
Sbjct: 574 RERLRFHHSGTHLLNGALRNLLGDHVLQKGSVVSPEYLRFDFSHPSALTSKEIRKIESWV 633

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE-WFDLCRG 185
            E I ++ P + + L  E A+++        K          + V + + G+   + C G
Sbjct: 634 NESIRKNYPVVTKELPIEDAKKIGAVATFGEKY--------GDRVRVVQMGDASVEFCGG 685

Query: 186 PHVRSTGQVKKFFKLMKVA 204
            HV  TG++  FF   + +
Sbjct: 686 THVSHTGEIGYFFIKKESS 704


>gi|116327492|ref|YP_797212.1| alanine--tRNA ligase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|122284708|sp|Q054G6|SYA_LEPBL RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|116120236|gb|ABJ78279.1| Alanine--tRNA ligase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
          Length = 940

 Score = 71.0 bits (172), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 29/139 (20%), Positives = 61/139 (43%), Gaps = 10/139 (7%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGF-YYDFDKEQPFSSDELAQIEKKM 126
           R      HS  H++  A++++  +  +  G ++   +  +DF      +S E+ +IE  +
Sbjct: 574 RERLRFHHSGTHLLNGALRNLLGDHVLQKGSVVSPEYLRFDFSHPSALTSKEIRKIESWV 633

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE-WFDLCRG 185
            E I ++ P + + L  E A+++        K          + V + + G+   + C G
Sbjct: 634 NESIRKNYPVVTKELPIEDAKKIGAVATFGEKY--------GDRVRVVQMGDASVEFCGG 685

Query: 186 PHVRSTGQVKKFFKLMKVA 204
            HV  TG++  FF   + +
Sbjct: 686 THVSHTGEIGYFFIKKESS 704


>gi|332687374|ref|YP_004457147.1| seryl-tRNA synthetase [Melissococcus plutonius ATCC 35311]
 gi|332687375|ref|YP_004457148.1| seryl-tRNA synthetase [Melissococcus plutonius ATCC 35311]
 gi|332371383|dbj|BAK22338.1| seryl-tRNA synthetase [Melissococcus plutonius ATCC 35311]
 gi|332371384|dbj|BAK22339.1| seryl-tRNA synthetase [Melissococcus plutonius ATCC 35311]
          Length = 423

 Score = 71.0 bits (172), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 35/239 (14%), Positives = 89/239 (37%), Gaps = 22/239 (9%)

Query: 227 TQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLIS 281
              E+ ++    +     + H ++   +D+          G+  +++   G ++ + + +
Sbjct: 120 DNIEVKRWSKPRQFDFHPKAHYEIGEALDILDFQRGAKVTGARFLYYKNLGARLERAIYN 179

Query: 282 YMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPM 339
           +M     +   ++E+ TP +++      +G +  ++ ++F V   D        + L P 
Sbjct: 180 FMLDTHINEHGFQEMITPYMVNSKSMFGTGQFPKFKEDVFQVADTD--------YTLIPT 231

Query: 340 NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCT 396
                   + + + S  ELP+        +R+E   +     GL+R+  F + +   F T
Sbjct: 232 AEVPLTNYYANEILSEDELPIYFTAMSPCFRSEAGSAGKDTRGLIRLHQFHKVEMVKFTT 291

Query: 397 KEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
           +E  ++E   +      I +        + L T              +W  A+N  + +
Sbjct: 292 EETSYDELESLTRAGEEILEKLELPYRTIVLCTGDMGFSAAKTYDIEVWMPAQNTYREI 350


>gi|327438151|dbj|BAK14516.1| seryl-tRNA synthetase [Solibacillus silvestris StLB046]
          Length = 430

 Score = 71.0 bits (172), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 52/345 (15%), Positives = 115/345 (33%), Gaps = 40/345 (11%)

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
           + +A+ E    E             + E A E+    +     E+ + I A +      +
Sbjct: 40  ELIAKTEVLKAERNKVSEQISVMKRNKEDASEVIARMR-----EVGDEIKALDAELNAIE 94

Query: 177 GEWFDLCRG-PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
            E+ D+    P++          +   V    W             G       E   + 
Sbjct: 95  DEFKDMMMRLPNIPHESVPVGTEEDDNVEEYTW-------------GDVPAFNFEAKAHW 141

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEE 293
              +E +  D  + A+           S  +F+   G ++ + L+++M     D   Y E
Sbjct: 142 DIAKELDIVDFERGAKVTG--------SRFLFYKGLGARLERALLNFMMDLHSDQHGYTE 193

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           +  PQ++++     +G    +  ++F +       +D   + L P         +   + 
Sbjct: 194 MLPPQIVNRDSLTGTGQLPKFEEDVFKL----VREEDEMDYYLIPTAEVPVTNYYRDEIL 249

Query: 354 SYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
           S   LP   + F + +R+E   +     GL+R   F + +   F   E+ + +   +   
Sbjct: 250 SADMLPQAFSAFSANFRSEAGSAGRDTRGLIRQHQFNKVELVRFVKPEESYEQLEILTGH 309

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENIMKGV 451
              + +  G     +K+ T              +W  A+N+ + +
Sbjct: 310 AEKVLQLLGLPYRKLKMCTADLGFTAAKKYDLEVWIPAQNMYREI 354


>gi|189501797|ref|YP_001957514.1| glycyl-tRNA synthetase [Candidatus Amoebophilus asiaticus 5a2]
 gi|189497238|gb|ACE05785.1| hypothetical protein Aasi_0361 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 496

 Score = 71.0 bits (172), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 60/386 (15%), Positives = 122/386 (31%), Gaps = 67/386 (17%)

Query: 275 IFQTLISYMRRKIKDDY-----EEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
           + + L + ++ +          +E     +     W +       R N+          +
Sbjct: 126 LLEKLQALLQAEELAGLHTLLLQEKIVCPISRTANWTEVH-----RFNLMFATKVGAQEE 180

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYR-ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQ 388
           +  T  L+P    G    F +  K+ R ++P  +A+ G  +RNE   +   + R+R F Q
Sbjct: 181 NADTIYLRPETAQGIFVNFLNVQKTARMKVPFGIAQIGKAFRNEIV-ARQFIFRMREFEQ 239

Query: 389 DDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
            +   F     E+ +    +       I      EK+ +K   +                
Sbjct: 240 MEMQFFIQPGSEEKWFNYWQQARWQWHIALGLTEEKLRIKPHAQLAHYA----------- 288

Query: 447 IMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF 506
             K  +D      + +   G    EG     + ++ LK+                + SR 
Sbjct: 289 --KAAVDI-----EYQFPFGYKEIEGIH--ARSDFDLKN--------------HEVASRK 325

Query: 507 NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK---------------GNLPLWLS 551
              Y +    + +   +     GS    + ++ E F                  L   L+
Sbjct: 326 KLQYFDPELNQNYLPHVIETSLGSDRLILMLLCEAFTEETITEEESAKTRTYLKLHPALA 385

Query: 552 PIQAIVTTITSSAV--EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIIC 609
           PI+A +  +       + AQEI   LK           N++I  +     +   P  I  
Sbjct: 386 PIKAAIFPLVKKDNLPQKAQEIFKSLKYDFP--LIYEENQSIGKRYARQDLIGTPYCITI 443

Query: 610 GDKEASERSIGIRRFGSTTTQKVSLL 635
             +   + ++ +R   S   ++V + 
Sbjct: 444 DHQTLEDDTVTLRERDSMQQERVHVN 469


>gi|134094256|ref|YP_001099331.1| seryl-tRNA synthetase [Herminiimonas arsenicoxydans]
 gi|166222732|sp|A4G3W7|SYS_HERAR RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|133738159|emb|CAL61204.1| serine tRNA synthetase (Serine--tRNA ligase) (SerRS) [Herminiimonas
           arsenicoxydans]
          Length = 431

 Score = 71.0 bits (172), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 44/222 (19%), Positives = 82/222 (36%), Gaps = 13/222 (5%)

Query: 242 EKRDHRKLAREMDL-FHIAEDGSGVIFWHRKG--WKIFQTLISYMRRKIKD--DYEEINT 296
           E RDH  +   + L F +A   +G  F   KG   ++ + L  +M     +   Y E  T
Sbjct: 135 EVRDHVDIGAALGLDFDVAAKITGSRFSVMKGGIARLHRALAQFMLDTHTEEHGYTECYT 194

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +++    Q +G    + A++FAVK       +     L P        +    + +  
Sbjct: 195 PYIVNADSLQGTGQLPKFEADLFAVKKGGQE-GEGEALYLIPTAEVPLTNIVRDEILAAD 253

Query: 357 ELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
            LPVR+      +R+E         G++R   F + +       E+ +    ++     +
Sbjct: 254 ALPVRMTAHSPCFRSEAGSYGRDTRGMIRQHQFDKVEMVQVVHPEKSYEALDEMCGHAEN 313

Query: 414 IYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
           I K  G    ++ L T              +W  A+N  + +
Sbjct: 314 ILKKLGLPYRVITLCTGDMGFGASKTYDLEVWLPAQNTYREI 355


>gi|116073516|ref|ZP_01470778.1| seryl-tRNA synthetase [Synechococcus sp. RS9916]
 gi|116068821|gb|EAU74573.1| seryl-tRNA synthetase [Synechococcus sp. RS9916]
          Length = 425

 Score = 71.0 bits (172), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 35/244 (14%), Positives = 79/244 (32%), Gaps = 20/244 (8%)

Query: 220 IYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDL----FHIAEDGSGVIFWHRKGWKI 275
             G + +  QE+ ++    ++    +H ++A  + L      +    S  +    +G ++
Sbjct: 117 PEGRSEDDNQEVRRWGTPRQDEGLEEHWQIADRLGLLDTERSVRISQSRFVTLMGQGARL 176

Query: 276 FQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
            + LI++M        Y+E+  P +++    Q SG    +    F     D         
Sbjct: 177 ERALINFMLDLHCSKGYKEVLPPVLVNSASLQGSGQLPKFAEESFRCAEDD--------L 228

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDA 391
            L P       ++    +    +LPVR   +   +R E         GL+R+  F + + 
Sbjct: 229 WLTPTAEVPVTSLHRDEIIPADQLPVRYVAYSPCFRREAGSYGRDTRGLIRLHQFNKVEL 288

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKI----MVKLSTRPEKRVGSDALWDDAENI 447
           + F   +       +I     ++ +                     R     +W      
Sbjct: 289 YWFVHPDHSEKAHAQITADAEAVLQALELPYRVLDLCTGDIGFSAARTYDLEVWLAGAGA 348

Query: 448 MKGV 451
            + +
Sbjct: 349 YREI 352


>gi|293189558|ref|ZP_06608278.1| glycine--tRNA ligase [Actinomyces odontolyticus F0309]
 gi|292821648|gb|EFF80587.1| glycine--tRNA ligase [Actinomyces odontolyticus F0309]
          Length = 462

 Score = 70.6 bits (171), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 54/324 (16%), Positives = 105/324 (32%), Gaps = 39/324 (12%)

Query: 334 FALKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
             L+P    G    + +    + ++ P  + + G  +RNE +   + + R R F Q +  
Sbjct: 160 HYLRPETAQGIFINYANVMNAARKKPPFGIGQIGKSFRNEITPG-NFIFRTREFEQMELE 218

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
            FC             +   + Y + G +   ++    P+         +   +  K  +
Sbjct: 219 FFCEPGTDEEWHQYWIDYRKAWYVNLGIDPENLREYEHPQ---------EKLSHYSKRTV 269

Query: 453 DTIKNSSQDRINTGVLLGEG--AFY---------GPKFEYILKDAIGRDWQCGTIQVDFN 501
           D            G L G      Y         G K +Y   +   R W    I+    
Sbjct: 270 DLEYRFGFQGSEWGELEGIANRTDYDLTVHSEASGAKLDYFDPNTKER-WTPYVIEPSAG 328

Query: 502 LPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT 561
           L     AF + ++ E   P        G  +R +          L   L+P++A V  ++
Sbjct: 329 LTRSLMAFLIEAYHEDEAPNAKG----GVDKRVV--------LKLDPRLAPVKAAVLPLS 376

Query: 562 --SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSI 619
                   AQE+A+ L+    +++ D     +  + R       P  I        + ++
Sbjct: 377 RKPELTGPAQELADELRGI-WNVDYDDAGA-VGRRYRRQDEIGTPFCITYDFDSIEDHAV 434

Query: 620 GIRRFGSTTTQKVSLLDAIPILTK 643
            IR   +    ++ L      L +
Sbjct: 435 TIRERDTMEQVRIPLDKVKSYLIE 458


>gi|85703236|ref|ZP_01034340.1| alanyl-tRNA synthetase [Roseovarius sp. 217]
 gi|85672164|gb|EAQ27021.1| alanyl-tRNA synthetase [Roseovarius sp. 217]
          Length = 892

 Score = 70.6 bits (171), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 38/146 (26%), Positives = 66/146 (45%), Gaps = 6/146 (4%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSS 116
           S+++      R+     HS  H++ EA++    E     G    ED   +DF   +  S+
Sbjct: 547 SVKLEVDHSRRNAIRANHSATHLLHEALRKALGEHVAQRGSLNAEDRLRFDFSHAKALST 606

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKAREL--FESKKEAYKVEI-LESIPAKENVTL 173
            EL ++E ++ E I +++P   + ++ + AR L       E Y  E+ + S+ A+     
Sbjct: 607 AELERVESEVNEFIRQNAPVETRIMTPDDARALGAQALFGEKYGDEVRVVSMGAEAGSGK 666

Query: 174 YRQG--EWFDLCRGPHVRSTGQVKKF 197
              G     +LC G HVR TG +  F
Sbjct: 667 GADGRTYSIELCGGTHVRRTGDIGVF 692


>gi|194246533|ref|YP_002004172.1| Seryl-tRNA synthetase [Candidatus Phytoplasma mali]
 gi|254783041|sp|B3R0F5|SYS_PHYMT RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|193806890|emb|CAP18319.1| Seryl-tRNA synthetase [Candidatus Phytoplasma mali]
          Length = 423

 Score = 70.6 bits (171), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 32/210 (15%), Positives = 79/210 (37%), Gaps = 19/210 (9%)

Query: 244 RDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ 298
           +DH  L R +++          GS  I +   G ++ ++LI +M     +  Y EI  P 
Sbjct: 138 KDHVTLGRNLNILDFDRASKITGSRFIVYKGLGARLERSLIQFMMDLHSEKGYIEIIPPF 197

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +++      +G    ++ + + ++ +++       + L P      + +  + + S + L
Sbjct: 198 IVNDISMFSTGQLPKFKNDSYRLENSNN-------WYLNPTGEVPAINLHRNEVLSQKNL 250

Query: 359 PVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           P+    F + +R E   +     G++R   F + +   F   +  + E   +     S+ 
Sbjct: 251 PLNYVVFTTCFRQEAGTAGKDTRGILRQHQFNKVELIKFTEPQDSYLELENMLQDAESVL 310

Query: 416 KDFGFEKIMVKLSTRPEKR----VGSDALW 441
           +       ++ L +              +W
Sbjct: 311 QKLELPYRVIMLPSHELGFSASKTYDIEVW 340


>gi|320161174|ref|YP_004174398.1| histidyl-tRNA synthetase [Anaerolinea thermophila UNI-1]
 gi|319995027|dbj|BAJ63798.1| histidyl-tRNA synthetase [Anaerolinea thermophila UNI-1]
          Length = 426

 Score = 70.6 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 57/431 (13%), Positives = 128/431 (29%), Gaps = 81/431 (18%)

Query: 268 WHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADD 326
           ++ +   +   L + +R   +   Y+E   P +    L+            +   +    
Sbjct: 14  FYPEIMAVRNWLYARIREVSEKFGYQEYEGPFLERVDLYAAKS-----GEELVNEQSFVF 68

Query: 327 TIKDLRTFALKPMNCPGHVAVFNHGLKSYREL--PVRLAEFGSVYRNEPSGSLHGLMRVR 384
             +     AL+P   P    +         EL  P+R   FG  +R E         R R
Sbjct: 69  QDRGGDYIALRPELTPTLARMVAQRQ---NELVYPLRWWSFGPFWRYERPQK----GRTR 121

Query: 385 GFTQDD-----AHVFCTKEQMFNECLKIH-----------------NLIISIYKDFGFEK 422
            F Q +     +       ++    ++                    L+    ++ G  +
Sbjct: 122 EFFQWNIDIIGSQAIEADAELLAVAVEFFKSVGLTSQQVKLLVNNRRLMDVQLENLGIRE 181

Query: 423 IMVKLSTRPEKR---------------VG--------------SDALWDDAENIMKGVLD 453
              +   R   R                G              +++LW+ + + +K V +
Sbjct: 182 GQKRDVFRLIDRKEKLPLPEWRQYAFDFGLTQEQLSGLESLLVNESLWETS-DELKRVFE 240

Query: 454 TIKNSS-QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
            ++    ++ +     +  G  Y     +  KD  G     G    D  +          
Sbjct: 241 LLEGMGIREYVEFAPQIIRGLDYYTGTVFEAKDLDGGRSILGGGHYDNLVA--------- 291

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIA 572
             +    P+       G +   I +++E +     L  +P Q +VT      +  +  +A
Sbjct: 292 --NVGGEPLPGVGFAMGDV--MITLVLEKYGKLPALETAPAQVLVTVFDLERLPQSFALA 347

Query: 573 NLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
             L+   L +        +  +++      I   +I G  E S   + ++       + V
Sbjct: 348 ARLREQGLKVVWYPEAAKLQKQLKFADRAGIRFAVIYGPDEISAGQVALKDLHQRNQELV 407

Query: 633 SLLDAIPILTK 643
           S+ +    + +
Sbjct: 408 SVENVGERVRQ 418


>gi|58197411|dbj|BAD88636.1| hypothetical protein [Streptococcus suis]
          Length = 119

 Score = 70.6 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 30/113 (26%), Positives = 53/113 (46%), Gaps = 7/113 (6%)

Query: 539 IENFKGNLPLWLSPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
           +E+     P  L+P    +  +     +A+E  Q I   L      + TD RNE +  K 
Sbjct: 7   VESRGSTSPKELAPFDVHLIPVNVKDEAAMELTQSIEASLVGAGYEVLTDDRNERVGVKF 66

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV---SLLDAIPILTKES 645
            +  +  +PI +  G K A++  + ++  G+  T +V    LL+ + ILTKE+
Sbjct: 67  SDSDLIGLPIRVTVGKK-AADGIVEVKIKGTGDTVEVHVDQLLETLQILTKEN 118


>gi|187729858|ref|YP_001789032.1| histidyl-tRNA synthetase [Tetragenococcus halophilus]
 gi|170676050|dbj|BAG14320.1| histidyl-tRNA synthetase [Tetragenococcus halophilus]
          Length = 428

 Score = 70.6 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 62/412 (15%), Positives = 123/412 (29%), Gaps = 51/412 (12%)

Query: 269 HRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
                +++Q +    R       Y  I TP       +          +++   +  D  
Sbjct: 16  LPGEIEVWQKVEKIARDTFNQFGYRGIRTPIF---ENYNVFARNVGDTSDIVEKQMYDFD 72

Query: 328 IKDLRTFALKP--MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRG 385
            +  R  AL+P          V N         P ++   G ++R E   S     R R 
Sbjct: 73  DRGGRRLALRPEGTAGTVRAYVENKLFGPEYPKPYKVYYMGPMFRYERPQS----GRQRQ 128

Query: 386 FTQ--DDAHVFCTKEQMFNECLKIHNLIIS--------IYKDFGFEKIMVKLSTRPEKRV 435
           FTQ   +A    + +       +                    G ++            +
Sbjct: 129 FTQIGCEALNSESPQIDVEVISEALQFFKQLGINDLKLTVNTLGDKETRDAYHKALIDYL 188

Query: 436 G------SDALWDDAENIMKGVLDTIKNSSQDRI-NTGVLLGEGAFYGPKF--------- 479
                  SD   +        VLD+   + Q  + N   +L   + Y  K+         
Sbjct: 189 KPYYDQLSDDSKERMYKNPLRVLDSKDETDQKIVANAPSILDSLSDYSAKYFEEVKKLLD 248

Query: 480 ------EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHR-------- 525
                 E       G D+   TI    +    F   YV       +  +I +        
Sbjct: 249 KLNIKYEIDSDMVRGLDYYTQTIFEIMSNSDVFGGGYVTVCGGGRYNGLISQLGGPDEGG 308

Query: 526 AVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD 585
             +G     + ++++    +      P      +      E A E+ + ++ + +S + +
Sbjct: 309 IGYGIGVERLLLLVQKENPDFTPKYGPD-VFFASADDEGDELAFEVLDKIRKNGVSADKN 367

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
           +++  +  +I+E    K     + G KE  E    + +  S  TQ VS+ + 
Sbjct: 368 YQDVKVGSQIKEAIRSKPRYYAVIGKKEVEEGKFELSKVDSDQTQTVSVKEF 419


>gi|332656319|ref|YP_004301621.1| histidyl-tRNA synthetase [Tetragenococcus halophilus]
 gi|332656357|ref|YP_004301657.1| histidyl-tRNA synthetase [Tetragenococcus halophilus]
 gi|332656384|ref|YP_004306076.1| histidyl-tRNA synthetase [Tetragenococcus halophilus]
 gi|332656403|ref|YP_004306094.1| histidyl-tRNA synthetase [Tetragenococcus halophilus]
 gi|326324632|dbj|BAJ84459.1| histidyl-tRNA synthetase [Tetragenococcus halophilus]
 gi|326324662|dbj|BAJ84488.1| histidyl-tRNA synthetase [Tetragenococcus halophilus]
 gi|326324700|dbj|BAJ84524.1| histidyl-tRNA synthetase [Tetragenococcus halophilus]
 gi|326324719|dbj|BAJ84542.1| histidyl-tRNA synthetase [Tetragenococcus halophilus]
          Length = 428

 Score = 70.6 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 62/412 (15%), Positives = 124/412 (30%), Gaps = 51/412 (12%)

Query: 269 HRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
                +++Q +    R       Y  I TP       +          +++   +  D  
Sbjct: 16  LPGEIEVWQKVEKIARDTFNQFGYRGIRTPIF---ENYNVFARNVGDTSDIVEKQMYDFD 72

Query: 328 IKDLRTFALKP--MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRG 385
            +  R  AL+P          V N         P ++   G ++R E   S     R R 
Sbjct: 73  DRGGRRLALRPEGTAGTVRAYVENKLFGPEYPKPYKVYYMGPMFRYERPQS----GRQRQ 128

Query: 386 FTQ--DDAHVFCTKEQMFNECLKIHNLIIS--------IYKDFGFEKIMVKLSTRPEKRV 435
           FTQ   +A    + +       +                    G ++            +
Sbjct: 129 FTQIGCEALNSESPQIDVEVISEALQFFKQLGINDLKLTVNTLGDKETRDAYHKALIDYL 188

Query: 436 G------SDALWDDAENIMKGVLDTIKNSSQDRI-NTGVLLGEGAFYGPKF--------- 479
                  SD   +        VLD+   + Q  + N   +L   + Y  K+         
Sbjct: 189 KPYYDQLSDDSKERMYKNPLRVLDSKDETDQKIVANAPSILDSLSDYSAKYFEEVKKLLD 248

Query: 480 ------EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHR-------- 525
                 E       G D+   TI    +    F   YV       +  +I +        
Sbjct: 249 KLNIKYEIDSDMVRGLDYYTQTIFEIMSDSDVFGGGYVTVCGGGRYNGLISQLGGPDEGG 308

Query: 526 AVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD 585
             +G     + ++++    +      P      +      E A E+ + ++ + +S + +
Sbjct: 309 IGYGIGVERLLLLVQKENPDFTPKYGPD-VFFASADDEGDELAFEVLDKIRKNGVSADKN 367

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
           +++  +  +I+E   +K     + G KE  E    + +  S  TQ VS+ + 
Sbjct: 368 YQDVKVGSQIKEAIRRKPRYYAVIGKKEVEEGKFELSKVDSDQTQTVSVKEF 419


>gi|294626627|ref|ZP_06705224.1| alanyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|294665630|ref|ZP_06730907.1| alanyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|292599047|gb|EFF43187.1| alanyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292604576|gb|EFF47950.1| alanyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
          Length = 882

 Score = 70.6 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 35/164 (21%), Positives = 65/164 (39%), Gaps = 16/164 (9%)

Query: 42  AINGKVCDLSDPVREGSIEIIT------PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVA 95
              G+       + EG++ +            R   ++ HS  H++  A++ +       
Sbjct: 531 KFAGQFHGHVGRISEGTLALGDVLAGGIDTQRRGKTILNHSATHLLHAALREVLGTHVQQ 590

Query: 96  IGP-IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            G  +  D   +DF   QP ++DELA IE+K+   +  +       ++ ++A +      
Sbjct: 591 KGSLVAPDRLRFDFSHFQPITADELAVIERKVNAEVRTNHGVEVHNMAMQEALDFGAMAL 650

Query: 155 EAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
              K          ENV + + G +  +LC G HV  TG +  F
Sbjct: 651 FGEKY--------GENVRVLKMGGYSTELCGGTHVTRTGDIGLF 686


>gi|58337885|ref|YP_194470.1| seryl-tRNA synthetase [Lactobacillus acidophilus NCFM]
 gi|67461604|sp|Q5FIN5|SYS_LACAC RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|58255202|gb|AAV43439.1| seryl-tRNA synthetase [Lactobacillus acidophilus NCFM]
          Length = 435

 Score = 70.6 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 77/188 (40%), Gaps = 9/188 (4%)

Query: 272 GWKIFQTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G  + + + ++ +    KD Y EI  P +++    Q +G +  +  +++ +   DD  K 
Sbjct: 170 GALLERAVFNFFLDENTKDGYTEIIPPYLVNDASMQGTGQFPKFHEDVYTIVDNDDPDKP 229

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFT 387
            R   L P      V  F + +    +LP+ +      +R+E   +     GL+R+  F 
Sbjct: 230 -RDLTLIPTAEVPLVNYFRNEIIHENKLPINVTAMSPAFRSEAGSAGRDTRGLIRMHEFR 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +    C  ++ ++E  K+ +    + +  G    +V LST              +W  
Sbjct: 289 KVEMVKICKPDESWDELEKLTHNAEHLLQKLGLPYHVVALSTGDASFTSAKTYDLEVWMP 348

Query: 444 AENIMKGV 451
           A++  + +
Sbjct: 349 AQDKYREI 356


>gi|227902950|ref|ZP_04020755.1| seryl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
 gi|227869299|gb|EEJ76720.1| seryl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
          Length = 441

 Score = 70.6 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 77/188 (40%), Gaps = 9/188 (4%)

Query: 272 GWKIFQTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G  + + + ++ +    KD Y EI  P +++    Q +G +  +  +++ +   DD  K 
Sbjct: 176 GALLERAVFNFFLDENTKDGYTEIIPPYLVNDASMQGTGQFPKFHEDVYTIVDNDDPDKP 235

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFT 387
            R   L P      V  F + +    +LP+ +      +R+E   +     GL+R+  F 
Sbjct: 236 -RDLTLIPTAEVPLVNYFRNEIIHENKLPINVTAMSPAFRSEAGSAGRDTRGLIRMHEFR 294

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +    C  ++ ++E  K+ +    + +  G    +V LST              +W  
Sbjct: 295 KVEMVKICKPDESWDELEKLTHNAEHLLQKLGLPYHVVALSTGDASFTSAKTYDLEVWMP 354

Query: 444 AENIMKGV 451
           A++  + +
Sbjct: 355 AQDKYREI 362


>gi|6434818|gb|AAF08322.1|U31860_1 threonyl-tRNA synthetase [Streptococcus pyogenes]
          Length = 70

 Score = 70.6 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 27/70 (38%), Positives = 43/70 (61%), Gaps = 2/70 (2%)

Query: 245 DHRKLAREMDLFHIAEDGS-GVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQ 302
           DHRKL +E+DLF I+++   G+ FW   G  I +TL  Y+  +++   Y+ + TP +   
Sbjct: 1   DHRKLGKELDLFMISQEVGQGLPFWLPDGATIRRTLERYITDKELASGYQHVYTPPLASV 60

Query: 303 HLWQQSGHWD 312
            L++ SGHWD
Sbjct: 61  ELYKTSGHWD 70


>gi|20089821|ref|NP_615896.1| histidyl-tRNA synthetase [Methanosarcina acetivorans C2A]
 gi|32130123|sp|Q8TS62|SYH_METAC RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|19914766|gb|AAM04376.1| histidyl-tRNA synthetase [Methanosarcina acetivorans C2A]
          Length = 413

 Score = 70.6 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 68/419 (16%), Positives = 140/419 (33%), Gaps = 65/419 (15%)

Query: 268 WHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADD 326
           +        + + S MR  +++  Y EI TP      L+                +  + 
Sbjct: 12  FLPADTARRRYVESVMRNVVRNWGYSEIITPTFEHLDLFTLKS------GEGIVGELYNF 65

Query: 327 TIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
           T K  R   L+P      + ++ + L+ + + P++L  F + +R E         R R F
Sbjct: 66  TDKGGRDMTLRPELTAPVMRLYVNELQPFPK-PLKLFYFENCFRYERPQK----GRFREF 120

Query: 387 TQD------------DAHVFCTKEQMFNEC-----LKIHNLIISIYKDFGFEKIMVKLST 429
            Q             DA V    + +         +K+ NL +      G E  +V    
Sbjct: 121 WQFGVELIGSGKSDSDAEVIALADALLKAVGIQGDMKLGNLAVIRTLLKGLEPEIVSKVM 180

Query: 430 R---PEKRVGSDALWDD--AENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           R    ++  G ++L ++  AE  +K  L  + +     I   V    G          + 
Sbjct: 181 RLVDKKEYAGLESLLEEIGAEEQLKSDLFHLIHLEGKYILPKVKEIVG---------NIP 231

Query: 485 DAIGRDWQCGTI-------QVDFNLPSRFN-----AFYVNSHSEKCHPVMIHRAVFGSIE 532
           + +G +     +        +DF +    +      F V +        +     +  I+
Sbjct: 232 ELVGFEKTLKLLDAYGVDYSLDFGIARGLDYYTGMVFEVYAEGLGAQKQVCGGGSYQLIQ 291

Query: 533 RF---------IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIE 583
            F          GI  +      PL     + +V     +    A ++A+ L+++   ++
Sbjct: 292 LFGGGDVPSTGFGIGFDRIMEICPLVPPASKNLVLVSKPATHIEAVKVASELRNYLP-VQ 350

Query: 584 TDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            D        +    +      ++I G+KE     + +R   S   + ++L + I  +T
Sbjct: 351 IDLMERNFKAQFSYANTINADYVVIVGEKELEAGKLTLRDMVSGEQELLTLEEIIEKIT 409


>gi|87123701|ref|ZP_01079551.1| putative seryl-tRNA synthetase [Synechococcus sp. RS9917]
 gi|86168270|gb|EAQ69527.1| putative seryl-tRNA synthetase [Synechococcus sp. RS9917]
          Length = 425

 Score = 70.6 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 38/244 (15%), Positives = 82/244 (33%), Gaps = 20/244 (8%)

Query: 220 IYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED----GSGVIFWHRKGWKI 275
             G+     QE+ ++         ++H  +A ++ LF          S  +    +G ++
Sbjct: 117 PEGSDETDNQEVRRWGTPRRGDGLQEHWAIADQLGLFDTERSVRIAQSRFVTLFGQGARL 176

Query: 276 FQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
            + LI++M        Y E+  P +++      SG    +    F     D         
Sbjct: 177 ERALINFMLDLHTSKGYREVLPPVLVNSASLTGSGQLPKFAEESFRCADDD--------L 228

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDA 391
            L P       ++    + +  +LP+R   +   +R E         GL+R+  F + + 
Sbjct: 229 WLTPTAEVPVTSLHRDEIIAADQLPLRYVAYSPCFRREAGSYGRDTRGLIRLHQFNKVEL 288

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP----EKRVGSDALWDDAENI 447
           + F   +Q      +I     S+ +       ++ L T       +R     +W      
Sbjct: 289 YWFAHPDQSEEAHAQITADAESVLQALELPYRVLDLCTGDLGFSARRTYDLEVWLAGAGA 348

Query: 448 MKGV 451
            + +
Sbjct: 349 YREI 352


>gi|325924500|ref|ZP_08186019.1| alanyl-tRNA synthetase [Xanthomonas gardneri ATCC 19865]
 gi|325544995|gb|EGD16330.1| alanyl-tRNA synthetase [Xanthomonas gardneri ATCC 19865]
          Length = 882

 Score = 70.6 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 34/164 (20%), Positives = 65/164 (39%), Gaps = 16/164 (9%)

Query: 42  AINGKVCDLSDPVREGSIEIITPED------PRSLAVIRHSCAHIMAEAVQSIWPEVQVA 95
              G+       + EG++ +            R   ++ HS  H++  A++ +       
Sbjct: 531 KFAGQFHGHVGRITEGALALGDVLSGGIDVQRRGKTILNHSATHLLHAALREVLGTHVQQ 590

Query: 96  IGP-IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            G  +  D   +DF   QP +++ELA IE+K+   +  +       ++ ++A +      
Sbjct: 591 KGSLVAPDRLRFDFSHFQPITAEELAVIERKVNAEVRTNHGVEVHNMAMQEALDFGAMAL 650

Query: 155 EAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
              K          ENV + + G +  +LC G HV  TG +  F
Sbjct: 651 FGEKY--------GENVRVLKMGGYSTELCGGTHVTRTGDIGLF 686


>gi|301109960|ref|XP_002904060.1| glycyl-tRNA synthetase [Phytophthora infestans T30-4]
 gi|262096186|gb|EEY54238.1| glycyl-tRNA synthetase [Phytophthora infestans T30-4]
          Length = 487

 Score = 70.6 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 50/328 (15%), Positives = 99/328 (30%), Gaps = 27/328 (8%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T +      L+P    G    F +   +  ++LP  + + G  +RNE S
Sbjct: 171 FNLLFRTNMGATDETCDWIYLRPETAQGAYINFANVQSTMRKKLPFGIGQVGKSFRNEIS 230

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              H L R R F Q +   F    +  +  L   +        +G +   ++      + 
Sbjct: 231 PG-HFLFRTREFEQLELQFFTHPNESDDWYLYWVDQCYDFLTKYGIKPENLRKHEHAPEE 289

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           +   A +  A   ++      K         G+       Y  K      DA G+     
Sbjct: 290 L---AHYARATTDIQ-----FKYPFGWSELWGIANRTS--YDLK---KHMDASGKSLT-- 334

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQ 554
               D      F    +         VM+   +    E  +    E     L   ++P +
Sbjct: 335 --YQDLVAKEEFLPHVIEPALGAGR-VMLSMLLDAYDEEEVNG-RERTVLRLHPDIAPYR 390

Query: 555 AIVTTITSSAVEYAQEIANLLKSHHLS---IETDFRNETINYKIREHSIKKIPIIIICGD 611
             V  +     E   ++A  L         ++ D    +I  + R       P+ +    
Sbjct: 391 FAVLPLVKK--EPLLDVAQKLFEDLCGSASVDYDVTG-SIGRRYRRQDEIGTPMCLTVDF 447

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIP 639
               ++ + +R   S   ++V +   + 
Sbjct: 448 DTLEDKCVTVRDRDSMEQKRVPIEQILQ 475


>gi|229530358|ref|ZP_04419746.1| alanyl-tRNA synthetase [Vibrio cholerae 12129(1)]
 gi|229332131|gb|EEN97619.1| alanyl-tRNA synthetase [Vibrio cholerae 12129(1)]
          Length = 860

 Score = 70.6 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 59/143 (41%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFS 115
             ++ I  E  R+   + HS  H++  A++ +  E     G ++  +   +DF   +  +
Sbjct: 545 DQVDAIVDEKRRAAISLNHSATHLLHAALRKVLGEHVAQKGSLVRAETLRFDFSHLEAMT 604

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
             E+ ++E+ + + I  +       ++ ++A+          K          + V +  
Sbjct: 605 PAEIKEVERLVNQEIRHNHNIETNIMNIDEAKAKGAMALFGEKY--------DDQVRVLS 656

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G++  +LC G H  +TG +  F
Sbjct: 657 MGDFSTELCGGIHASNTGNIGLF 679


>gi|332656335|ref|YP_004301636.1| histidyl-tRNA synthetase [Tetragenococcus muriaticus]
 gi|326324678|dbj|BAJ84503.1| histidyl-tRNA synthetase [Tetragenococcus muriaticus]
          Length = 428

 Score = 70.6 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 62/412 (15%), Positives = 124/412 (30%), Gaps = 51/412 (12%)

Query: 269 HRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
                +++Q +    R       Y  I TP       +          +++   +  D  
Sbjct: 16  LPGEIEVWQKVEKIARDTFNQFGYRGIRTPIF---ENYNVFARNVGDTSDIVEKQMYDFD 72

Query: 328 IKDLRTFALKP--MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRG 385
            +  R  AL+P          V N         P ++   G ++R E   S     R R 
Sbjct: 73  DRGGRRLALRPEGTAGTVRAYVENKLFGPEYPKPYKVYYMGPMFRYERPQS----GRQRQ 128

Query: 386 FTQ--DDAHVFCTKEQMFNECLKIHNLIIS--------IYKDFGFEKIMVKLSTRPEKRV 435
           FTQ   +A    + +       +                    G ++            +
Sbjct: 129 FTQIGCEALNSESPQIDVEVISEALQFFKQLGINDLKLTVNTLGDKETRDAYHKALIDYL 188

Query: 436 G------SDALWDDAENIMKGVLDTIKNSSQDRI-NTGVLLGEGAFYGPKF--------- 479
                  SD   +        VLD+   + Q  + N   +L   + Y  K+         
Sbjct: 189 KPYYDQLSDDSKERMYKNPLRVLDSKDETDQKIVANAPSILDSLSDYSAKYFEEVKKLLD 248

Query: 480 ------EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHR-------- 525
                 E       G D+   TI    +    F   YV       +  +I +        
Sbjct: 249 KLNIKYEIDSDMVRGLDYYTQTIFEIMSDSDVFGGGYVTVCGGGRYNGLISQLGGPDEGG 308

Query: 526 AVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD 585
             +G     + ++++    +      P      +      E A E+ + ++ + +S + +
Sbjct: 309 IGYGIGVERLLLLVQKENPDFTPKYGPD-VFFASADDEGDELAFEVLDKIRKNGVSADKN 367

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
           +++  +  +I+E   +K     + G KE  E    + +  S  TQ VS+ + 
Sbjct: 368 YQDVKVGSQIKEAIRRKTRYYAVIGKKEVEEGKFELSKVDSDQTQTVSVKEF 419


>gi|189499024|ref|YP_001958494.1| glycyl-tRNA synthetase [Chlorobium phaeobacteroides BS1]
 gi|189494465|gb|ACE03013.1| glycyl-tRNA synthetase [Chlorobium phaeobacteroides BS1]
          Length = 488

 Score = 70.6 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 48/366 (13%), Positives = 112/366 (30%), Gaps = 56/366 (15%)

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH 350
            EEI  P        +       ++ NM A+       +      L+P    G    F++
Sbjct: 159 AEEIKAPDTGSADWTEVRQFNLMFQCNMGAL------AESSGKVYLRPETAQGIFVNFHN 212

Query: 351 -GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
               S  ++P  +A+ G  +RNE     + + R+  F Q +   F               
Sbjct: 213 VRESSRMKVPFGIAQIGKAFRNEIVKG-NFIFRMVEFEQMEMQYFVKPGTQVESFESWRE 271

Query: 410 LIISIY-KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
              + Y +  G     +      +    +D  +D                 +     G+ 
Sbjct: 272 ERFNWYIERLGITPEKLHWYKHDKLAHYADLAYDI----------------KFEYPFGIE 315

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
             EG     + ++ LK                    +   +   + +E+  P ++  +  
Sbjct: 316 EIEGIH--SRTDFDLK-------------QHQEFSGKNMEYIDQTTNERYIPYVVETSA- 359

Query: 529 GSIERFIGIMIENF-----------KGNLPLWLSPIQAIVTTITSSAV--EYAQEIANLL 575
           GS   F+ ++ +++                  ++P++A +  +       E A ++ + L
Sbjct: 360 GSDRLFLALLCDSYTEDVIDGEQRVMMRFAPKIAPVKAAILPLMKKGEMGEKAAKLRDEL 419

Query: 576 KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
            +    ++ D    +I  + R       P           + S+ +R   +   +++ + 
Sbjct: 420 -ATDFMVQYDDAG-SIGKRYRRQDEIGTPFCFTVDHDSMEDHSVTVRYRDTAKQERIEIS 477

Query: 636 DAIPIL 641
                L
Sbjct: 478 KVKEFL 483


>gi|261749283|ref|YP_003256968.1| serine-tRNA synthetase [Blattabacterium sp. (Periplaneta americana)
           str. BPLAN]
 gi|261497375|gb|ACX83825.1| serine-tRNA synthetase [Blattabacterium sp. (Periplaneta americana)
           str. BPLAN]
          Length = 424

 Score = 70.6 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 44/233 (18%), Positives = 90/233 (38%), Gaps = 20/233 (8%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFH----IAEDGSGVIFWHRKGWKIFQTLISY-MRR 285
                + ++      H +LA++  LF         GSG   +  KG K+ + LI Y + +
Sbjct: 129 QKIAPHSIKIENALPHWELAKKFQLFDLYLGTKICGSGFPVYIGKGAKLQRGLIQYFLDK 188

Query: 286 KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            I+  Y+E + P +++    + SG    Y       K     + +   F L P      +
Sbjct: 189 NIQASYKEYSFPYLIN----EISG----YSTGQIPDKEGQMYLIEKDNFYLIPTGEIPLM 240

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFN 402
             + + L SY++LP++   + S +R E       + GL R+  F + +     T +  F 
Sbjct: 241 NCYRNNLLSYKDLPIKSTTYTSCFRREAGSYGSKVRGLNRLHQFEKVEIIQITTPDTSFY 300

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENIMKGV 451
              ++ + + +I K       +++L  +             ++  A+     V
Sbjct: 301 YLEEMISHVQNILKSLELPFRLIRLMGKDLGFASAITYDFEVYSMAQKKWLEV 353


>gi|238598681|ref|XP_002394671.1| hypothetical protein MPER_05401 [Moniliophthora perniciosa FA553]
 gi|215464082|gb|EEB95601.1| hypothetical protein MPER_05401 [Moniliophthora perniciosa FA553]
          Length = 164

 Score = 70.6 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 18/107 (16%), Positives = 41/107 (38%), Gaps = 2/107 (1%)

Query: 539 IENFKGNLPLWLSPIQAIVTTIT--SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           IE    +LP  ++P + ++  ++          EI+  L+   +    D  N +I  +  
Sbjct: 33  IERGVLSLPPLVAPTKVLIVPLSAKEEFDPLVNEISTKLRRAGIFSRVDDSNTSIGKRYA 92

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +     P  I         R++ +R   +   +  S+ + I  +T+
Sbjct: 93  RNDELGTPYGITVDFASVQNRTVTLRERDTMDQRISSIDEVIATVTE 139


>gi|311746112|ref|ZP_07719897.1| histidine--tRNA ligase [Algoriphagus sp. PR1]
 gi|126576332|gb|EAZ80610.1| histidine--tRNA ligase [Algoriphagus sp. PR1]
          Length = 455

 Score = 70.6 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 70/461 (15%), Positives = 129/461 (27%), Gaps = 98/461 (21%)

Query: 269 HRKGWK------------IFQTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRA 316
             KG +            I  T+    +      Y++I TP + + +          Y  
Sbjct: 6   LPKGTRDFGPVKMARRNFILNTIKDTFQ---LFGYQQIETPAMENLNTLT-----GKYGD 57

Query: 317 NMFAVKCADDTIKD------LRTFALKPM------NCPGH-------VAVFNHGLKSYRE 357
               +        D       +     P+      +  G         A F    ++   
Sbjct: 58  EGDQLLFKILNSGDFLKKVESKDIEAGPLATLPKVSEKGLRYDLTVPFARFVVMNRNELT 117

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF------CTKEQMFNECLKIHNLI 411
            P +  +   V+R +         R R F Q DA V       C  E +         L 
Sbjct: 118 FPFKRFQIQPVWRADRPQK----GRYREFYQCDADVVGTDSLVCEAEIILMIRRVFSQLK 173

Query: 412 ISIYKDF--------GFEKIMVKLSTRPEKRVGSDAL----WDDA--ENIMKGVLDTIKN 457
           ++ Y           G  + + +        V  D +    W+    E   +G  D    
Sbjct: 174 LNDYDIKVNNRKILTGISEAIGEAGKEAPLCVAIDKMDKIGWEKVKIELAERGFADQSVE 233

Query: 458 SSQDRINTGV-LLGEGAFY---------GPK---------------------FEYILKDA 486
             +  +N    L G+ +F          G K                      ++ +  A
Sbjct: 234 KLEPLVNLDTDLEGKISFLKEFLASSEVGLKGVAELEEMIIILGQMGANLDHVDFDILLA 293

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF----IGIMIENF 542
            G  +  G I           +       +    V     V G    F    +  ++E  
Sbjct: 294 RGLSYYTGAIFEVKVNGVSIGSVSGGGRYDNLTGVFGLEGVSGVGFSFGVDRLYDVLEEL 353

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
                  L   Q ++       ++YA  +   L++  +  E    +  I  +    + K 
Sbjct: 354 DLFPAESLDGTQILLIHFDQKGLDYALSVLPKLRNAGIKAEIYPDSAKIKKQFDYATKKG 413

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           IP + ICGD E   R + ++   S   + +S+   I  + K
Sbjct: 414 IPFVGICGDVEIENRMLALKNLESGNQESMSIEQVIDSVKK 454


>gi|54288337|gb|AAV31625.1| predicted histidyl-tRNA synthetase [uncultured alpha
           proteobacterium EBAC2C11]
          Length = 422

 Score = 70.6 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 63/424 (14%), Positives = 131/424 (30%), Gaps = 59/424 (13%)

Query: 269 HRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
             K     + +I   R       ++E+ TP        +         +++   +    +
Sbjct: 14  LPKNMAKHRLVIEAARNAASRYGFQEMATPIF---EFSEVFSRPLGESSDIVTKENYSFS 70

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
            +      L+P N  G V     G  + + LP++    G ++R E         R+R F 
Sbjct: 71  DRGGEMLTLRPENTAGVVRAVISGGLT-QNLPLKYFYAGPMFRYERPQK----GRMRQFH 125

Query: 388 QD------DAHVFCTKEQMFNECLKIHNL-------------------------IISIYK 416
           Q         H     E +      +  L                         +I   +
Sbjct: 126 QVGVEYLGPDHSLADAEVIACGARFLATLGVLDDCVLHLNSLGDGESRAAYRSALIDYLE 185

Query: 417 DFGF---EKIMVKLSTRPEKRVGSDALWDDAENIMKGV---LDTIKNSSQDRINTGVLLG 470
           +FG    +    +L   P + + S    D +  I+K      D + + S+    T V   
Sbjct: 186 EFGDQLSDDSKTRLKVNPLRILDSKDAGDRS--ILKDAPQLQDYLNDDSKTHFATLVAAL 243

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           + A  G  + +      G D+ C T               +          M+       
Sbjct: 244 DAA--GVAWVFDPLLVRGLDYYCHTAFEFVTNALGAQGTVLGGGRYDGLAEMLGGPRISG 301

Query: 531 IERFIGIMIENFKGNLP-LWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE 589
           +    G+  E     +     +  +  + T   +A + A  +   L+   + I+      
Sbjct: 302 VGWAAGV--ERLAMLVGETVPASPKVAIVTADDAAQQAAFGLTETLRDAGIDIDLPI-GG 358

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL-----DAIPILTKE 644
           ++  K+++     I +++I G  E ++  + +R     + Q++ L      D    + K 
Sbjct: 359 SMGKKLKKADKAGIRLVVIMGSDELAKNIVLLRDLSDGSQQELPLDAEHKSDLAAAIAKS 418

Query: 645 SLPP 648
            L P
Sbjct: 419 LLAP 422


>gi|323701687|ref|ZP_08113359.1| seryl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
 gi|323533460|gb|EGB23327.1| seryl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
          Length = 424

 Score = 70.6 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 48/344 (13%), Positives = 105/344 (30%), Gaps = 42/344 (12%)

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
           ++L  +E+             +   + + A E     ++    + ++ I  +      R 
Sbjct: 39  EKLVVVEQLKNTRNVVSQEIGRLKKAGQDAEEKQLEMRQV--SQQIKDIDDEIRTIEERL 96

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           GE   L   P++          +   +    W             G           +  
Sbjct: 97  GE--ILLAIPNLPHESVPVGKDENDNLEVRRW-------------GRPREFDFTPKPHWE 141

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEI 294
             E     D  +  +               F+   G ++ + LI++M         Y E+
Sbjct: 142 LGEALNILDFERAGKVTGARFT--------FYKGLGARLERALINFMLDLHTREHGYTEV 193

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
             P +++      +G    +  +MF +        +   + L P        ++   + S
Sbjct: 194 FPPFIVNSDSMVGTGQLPKFADDMFKL--------EGLNYYLIPTAEVPVTNLYREEILS 245

Query: 355 YRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI 411
             +LP+    + + +R E   +     GL+R   F + +   FC  E  F+E  K+    
Sbjct: 246 GEQLPIYHCAYSACFRAEAGAAGRDTRGLIRQHQFNKVELVKFCKPEDSFDELEKLTVNA 305

Query: 412 ISIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENIMKGV 451
             + +  G    +V L +              +W  + N  K +
Sbjct: 306 EKVLQALGLPYRVVLLCSGDMGFASAKTYDLEVWLPSYNAYKEI 349


>gi|326794213|ref|YP_004312033.1| glycyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
 gi|326544977|gb|ADZ90197.1| glycyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
          Length = 458

 Score = 70.6 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 64/449 (14%), Positives = 125/449 (27%), Gaps = 120/449 (26%)

Query: 270 RKGWKIFQTLISYMRRKIKDDYEEIN---TPQVLDQHLWQQSGHWDSYRANMFAVK---- 322
             G ++   L +   R +  + +++       + ++H+++ SGH D++   M        
Sbjct: 37  PLGTELKNNLKNAWWRAMVYERDDVEGLDAAIIQNKHVYKYSGHEDTFTDPMVDCHECKS 96

Query: 323 ---------------CADDTIKDLRTF------------------ALKPMNCPGHVAVFN 349
                          C  D + + R F                   L+P    G    F 
Sbjct: 97  RMRADHMKDIKKCDNCGSDNVTEPRDFNLMFKTNVGPMVNEDSYTYLRPETAQGIFTNFK 156

Query: 350 HGLKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
           + + S  R LP  +A+ G  +RNE +   + + RVR F Q +   FC             
Sbjct: 157 NVVDSTSRALPFGIAQIGKSFRNEITPR-NFIFRVREFEQMELEFFCKP----------- 204

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
                                      G D  W D     +      +  +++ I    +
Sbjct: 205 ---------------------------GEDEKWHDFWVETRKQWWLDQGLTEENIQFEYV 237

Query: 469 LGEG-AFYG-PKFEYILKDAIGRDWQCGT-------IQVDFNLPSRFNAFYVNSHSEKCH 519
            G+  A Y     + + K   G +   G        +         F+       +E   
Sbjct: 238 TGDDLAHYSKSTVDILYKFPHGFEELEGVANRTDYDLGSHTKAQEEFDLSAKVKKNEHST 297

Query: 520 PVMIHRAVFGSIER--------------FIGIMIENFK------------GNLPLWLSPI 553
             +  R +  +                  + IM E +                   L+PI
Sbjct: 298 AKLAVRDLEANKWEVPFCIEPSAGLDRGMLAIMTEAYTEEELENGSTRTVLKFKPHLAPI 357

Query: 554 QAIVTT---ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           +  +          V  A+E+ N L+   L          +    R H     P+ +   
Sbjct: 358 KVAILPLKKNKPEIVALAKELKNKLQKLGLGRILYENTGNVGKGYRRHDEVGTPLCVTVD 417

Query: 611 DK--EASERSIGIRRFGSTTTQKVSLLDA 637
               E  +  + +R   +     +   + 
Sbjct: 418 FDSIEKDDAPVTVRDRDTMEQVAIPAAEL 446


>gi|78047331|ref|YP_363506.1| alanyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria str.
           85-10]
 gi|123585336|sp|Q3BUQ7|SYA_XANC5 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|78035761|emb|CAJ23452.1| Alanyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria str.
           85-10]
          Length = 882

 Score = 70.6 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 36/164 (21%), Positives = 66/164 (40%), Gaps = 16/164 (9%)

Query: 42  AINGKVCDLSDPVREGSIEIIT------PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVA 95
              G+       + EG++ +            R   ++ HS  H++  A++ +       
Sbjct: 531 KFAGQFHGHVGRISEGALALGDVLAGGIDTQRRGKTILNHSATHLLHAALREVLGTHVQQ 590

Query: 96  IGP-IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            G  +  D   +DF   QPF++DELA IE+K+   +  +       ++ ++A +      
Sbjct: 591 KGSLVAPDRLRFDFSHFQPFTADELAVIERKVNAEVRANHGVEVHNMAMQEALDFGAMAL 650

Query: 155 EAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
              K          ENV + + G +  +LC G HV  TG +  F
Sbjct: 651 FGEKY--------GENVRVLKMGGYSTELCGGTHVTRTGDIGLF 686


>gi|323341530|ref|ZP_08081769.1| serine--tRNA ligase [Lactobacillus ruminis ATCC 25644]
 gi|323091051|gb|EFZ33684.1| serine--tRNA ligase [Lactobacillus ruminis ATCC 25644]
          Length = 424

 Score = 70.6 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 83/222 (37%), Gaps = 20/222 (9%)

Query: 242 EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINT 296
           E + H  +  ++ +          G+  +++   G ++ + + ++M     K+ Y E+  
Sbjct: 136 EPKAHWDIGEDLGILDFDRGAKVSGARFVYYKGLGARLERAVYNFMLDEHAKEGYTEMLP 195

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +++      +G +  ++ +++ V        +     L P         +   +    
Sbjct: 196 PYIVNAQTMYGTGQFPKFKEDVYQV--------NGEDMTLIPTAEVPLTNYYRDEVIPTE 247

Query: 357 ELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           +LPV        +R+E   +     GL+R+  F + +   F   E  ++E  K+     +
Sbjct: 248 KLPVYFTALTPCFRSEAGSAGRDTRGLIRMHQFNKVEMVKFSKPENSYDELEKMTQNAGN 307

Query: 414 IYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
           I +  G    ++ LST              +W  A+N  + +
Sbjct: 308 IMEKLGLPYHVITLSTGDMGFSAAMTHDLEVWMPAQNKYREI 349


>gi|221054768|ref|XP_002258523.1| prolyl-t-rna synthase [Plasmodium knowlesi strain H]
 gi|193808592|emb|CAQ39295.1| prolyl-t-rna synthase, putative [Plasmodium knowlesi strain H]
          Length = 552

 Score = 70.6 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 53/430 (12%), Positives = 120/430 (27%), Gaps = 109/430 (25%)

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLD 301
            +    L R   +    +D +G+      G+K  + LI ++   +K  +   +    +  
Sbjct: 105 DKASELLQRANYI----KDVNGLYNLLPLGYKSIEKLIHFLNIHLKRVNSHGLFMSILQA 160

Query: 302 QHLWQQSGHWDSYRANMFAV---------------KCADDTIKDLRTFALKPMNCPGHVA 346
           +  W  S     Y      V                       +     L P      + 
Sbjct: 161 KKWWNISDRSKLYSDEFLYVYKQKQQKGDMSKVNETVMTKKKMEDDGLILSPTCEEQAIC 220

Query: 347 VFN---HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE 403
           + N   +     + LP+ + +F   +RNE       L + + F   D + F + +   NE
Sbjct: 221 LINQVYNENIPAKSLPLLIHQFNYKFRNEKRLE-KTLFKSKEFLMKDGYSFHSNDICLNE 279

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
               +                                +    + +K      K    D++
Sbjct: 280 TYDSYK-----------------------------ECYGKIFSDLKLPFKVTKKRKMDKM 310

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVM 522
           N               E+ +    G+  +   I  +      +    Y+N  +EK + ++
Sbjct: 311 NALESH----------EFQVLCRDGKYKEAAHIFKLGDYYSKKLGIKYLNKRNEKNN-IL 359

Query: 523 IHRAVFGSIERFIGIMIE----NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIAN----- 573
           +     G   R +  +++    +    LP  ++P    +      +   A ++A      
Sbjct: 360 MGSYGIGIY-RLLYFLVDSFYDDDGIRLPEQIAPFSVYLIQTNQRSKYSATKVAKIVKMA 418

Query: 574 ----------------------------------LLKSHHLSIETDFRNETINYKIREHS 599
                                               K+ ++ I  D  +  ++ K++   
Sbjct: 419 QVTDAVEAMDAPNMATPPLNSNDVEYVLTLWLYNTFKNSNVDIYYDDTDLHLSRKLKNCD 478

Query: 600 IKKIPIIIIC 609
           +  +P  II 
Sbjct: 479 LIGVPNRIII 488


>gi|21242491|ref|NP_642073.1| alanyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str. 306]
 gi|24418694|sp|Q8PLQ0|SYA_XANAC RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|21107940|gb|AAM36609.1| alanyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str. 306]
          Length = 882

 Score = 70.6 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 35/164 (21%), Positives = 65/164 (39%), Gaps = 16/164 (9%)

Query: 42  AINGKVCDLSDPVREGSIEIIT------PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVA 95
              G+       + EG++ +            R   ++ HS  H++  A++ +       
Sbjct: 531 KFAGQFHGHVGRISEGALALGDVLAGEIDTQRRGKTILNHSATHLLHAALREVLGTHVQQ 590

Query: 96  IGP-IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            G  +  D   +DF   QP ++DELA IE+K+   +  +       ++ ++A +      
Sbjct: 591 KGSLVAPDRLRFDFSHFQPITADELAVIERKVNAEVRTNHGVEVHNMAMQEALDFGAMAL 650

Query: 155 EAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
              K          ENV + + G +  +LC G HV  TG +  F
Sbjct: 651 FGEKY--------GENVRVLKMGGYSTELCGGTHVTRTGDIGLF 686


>gi|332297434|ref|YP_004439356.1| alanyl-tRNA synthetase [Treponema brennaborense DSM 12168]
 gi|332180537|gb|AEE16225.1| alanyl-tRNA synthetase [Treponema brennaborense DSM 12168]
          Length = 595

 Score = 70.6 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 39/191 (20%), Positives = 72/191 (37%), Gaps = 31/191 (16%)

Query: 18  PVHATG----SDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVI 73
               T      D A    + L++        G + D S        EI T          
Sbjct: 415 EHGLTVNREEFDAAYKKHQELSRAGSEQVFKGGLADHS--------EITTK--------- 457

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFSSDELAQIEKKMQEIIAR 132
            H+  H++ +A++ +  +     G  I  +   +DF    P + +E+ ++E  + E I R
Sbjct: 458 YHTATHLLHKALKMVLGDHIAQKGSNITAERLRFDFSHPAPMTKEEIQRVEDIVNEQIRR 517

Query: 133 DSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRST 191
           D     + +  E+A++   +     K E          V +Y  G++  ++C GPHV  T
Sbjct: 518 DLKVTMEVMDLEEAKKGGATALFGEKYE--------SKVKVYTIGDFSKEVCGGPHVEHT 569

Query: 192 GQVKKFFKLMK 202
           G +  F    +
Sbjct: 570 GLIGTFKIQKE 580


>gi|313888744|ref|ZP_07822408.1| histidine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
 gi|312845302|gb|EFR32699.1| histidine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
          Length = 435

 Score = 70.6 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 54/449 (12%), Positives = 125/449 (27%), Gaps = 83/449 (18%)

Query: 259 AEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRAN 317
                G +    K   +F  +   +R+  +   +  I+TP +               ++ 
Sbjct: 6   PSTLPGFMELLPKDQILFNEMKDIIRKNFEKHGFLPIDTPVI--------------EKSE 51

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAV----FNHGLKSYREL--PVRLAEFGSVYRN 371
           +   K   +T K +  F+    +      +      + ++   +L  P +  + G VYR 
Sbjct: 52  VLLAKGGGETEKQIYRFSKGDTDMSLRFDLTVPLARYTVEHMNDLSFPFKRYQIGKVYRG 111

Query: 372 EPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI-----HNLIISIYKDFGFEKIMVK 426
           E +       R R F Q D       E       +      H      + DF       K
Sbjct: 112 EKAQK----GRFREFYQCDIDTIGMGELSLVNDAEFPVVIFHTFKDLGFTDFTIHLNNRK 167

Query: 427 LSTRPEKRVGSDALWD--DAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF----- 479
           +       +G +   +     + +  + +            G   GE      K      
Sbjct: 168 ILKGFFSSLGIEDSMNVLRTVDKLDKIGEESVLEELGENGIGRDSGEKILEFIKIKGSVD 227

Query: 480 -------EYILKDAI------------------GRDWQCGTIQVDFNLPSRFNAFYVNSH 514
                  +  +KD I                  G D  C  I +       +    V   
Sbjct: 228 EILEQLRDLKIKDEIFQEGLDELTQVVGYMRDFGIDEDCFDIDLKIARGLDYYTGTVYET 287

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL--------------------SPIQ 554
           +   +P +      G  E       +     + + +                    S + 
Sbjct: 288 TLDNYPKIGSVCSGGRYEDLASYYTDKTLPGVGISIGLSRLFYQLNEAKIISSEEKSLVD 347

Query: 555 AIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
            ++  +    +    ++ + L+   + +        +  K +     K+  +I+ G++E 
Sbjct: 348 LLIIPM-DDCIHDGIKLLSELREKGVRVSVYTEFAKLKKKFKYADQTKVDYVIVLGEEEI 406

Query: 615 SERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             R   ++   +   ++V+  + +    K
Sbjct: 407 KTRKYSLKDMKTGDQEEVTFDELVERFKK 435


>gi|183222806|ref|YP_001840802.1| seryl-tRNA synthetase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
 gi|189912838|ref|YP_001964393.1| seryl-tRNA synthetase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|238687768|sp|B0S8Z4|SYS_LEPBA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|238687846|sp|B0SRZ1|SYS_LEPBP RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|167777514|gb|ABZ95815.1| Serine--tRNA ligase [Leptospira biflexa serovar Patoc strain 'Patoc
           1 (Ames)']
 gi|167781228|gb|ABZ99526.1| Seryl-tRNA synthetase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
          Length = 418

 Score = 70.2 bits (170), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 36/236 (15%), Positives = 81/236 (34%), Gaps = 22/236 (9%)

Query: 220 IYGTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWK 274
             G +      + Q+    + S E + H  +  ++ +F         G+    +   G K
Sbjct: 114 PEGKSEEDNVLIRQWGEIPKLSFEAKTHFDIGEKLGIFDFERGVKLSGARFYTYRGLGAK 173

Query: 275 IFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           + ++L++ M      ++ YEE+  P +++      +G    +  + + +        +  
Sbjct: 174 LERSLMNLMLDTHTSENGYEEMWVPVLVNDESMTATGQLPKFAEDFYRL--------EKD 225

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQD 389
              L P         +   +   +ELP+ +    S +R E         GL+RV  F + 
Sbjct: 226 GLNLIPTAEVPLTNYYRDEIIQEKELPISVCAHTSCFRREAGSYGRDTRGLVRVHQFQKV 285

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV----KLSTRPEKRVGSDALW 441
           +   F   E+      K+     SI +       ++    K  +    +     +W
Sbjct: 286 ELVKFVEPEKSGEAHEKMLQDAESILQKLKLPYRVMLLCSKDMSSASSKTYDIEVW 341


>gi|88604151|ref|YP_504329.1| histidyl-tRNA synthetase [Methanospirillum hungatei JF-1]
 gi|121731779|sp|Q2FTC5|SYH_METHJ RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|88189613|gb|ABD42610.1| histidyl-tRNA synthetase [Methanospirillum hungatei JF-1]
          Length = 408

 Score = 70.2 bits (170), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 65/415 (15%), Positives = 131/415 (31%), Gaps = 61/415 (14%)

Query: 269 HRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
                +  + + + MR R     + EI TP   +  L+            M+  +     
Sbjct: 12  LPDEMERRREIEARMRARARLYGFREIATPVFEELELFTIRSGEGII-NEMYVFED---- 66

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
            K  R+ AL+P      + ++    +S  + PV+   F   +R E         R R F 
Sbjct: 67  -KGGRSLALRPELTAPVLRMYVEEGRSLNK-PVKWCYFADCFRYERPQK----GRYRQFW 120

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENI 447
           Q  A +            ++  L   + +  G   ++ ++      R     L D  +  
Sbjct: 121 QFGAELIGAD--SAMGDAEVITLGYDLLRTAGVTFVL-RIGHLSFMRTLLADLADGDKKK 177

Query: 448 MKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFE--------------------------Y 481
           ++  LD  K   +  I     +G      P                             +
Sbjct: 178 IRAFLD--KREEEAAITYLRDIGRDDLCDPLIRLCGARTLEDVFAIIGEIPEAARVREMF 235

Query: 482 ILKDAIGRDWQCGTI---QVDFNLPSRFNAFYVN---SHSEKCHPVMIHRAVFGSIERFI 535
            + DA G  ++        +D+     F  F       +            +FG  +   
Sbjct: 236 AILDASGIPYEINPAIARGLDYYTGVVFECFAEGLGAENQILGGGAYRLAHLFGGEDTPS 295

Query: 536 G--------IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR 587
                    +M+   + +   W    Q ++ T      +YA  IA   + + +  ETD  
Sbjct: 296 AGFAIGFDRVMVALGEASWVPWQP--QVMIITTNEG-RDYALTIAGQFRMNGIITETDLM 352

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           + + + +++          +I G  E    +I ++   + T +K++  +AI  LT
Sbjct: 353 DRSFSAQMKAAGKS-ADYAVIIGKDEVETGTITLKDLKAGTQEKITADEAIQKLT 406


>gi|325266501|ref|ZP_08133178.1| serine--tRNA ligase [Kingella denitrificans ATCC 33394]
 gi|324981944|gb|EGC17579.1| serine--tRNA ligase [Kingella denitrificans ATCC 33394]
          Length = 467

 Score = 70.2 bits (170), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 40/245 (16%), Positives = 82/245 (33%), Gaps = 14/245 (5%)

Query: 219 RIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDL-FHIAEDGSGVIFWHRKG--WKI 275
            +        +          + + +DH  L   + L F  A + SG  F   KG   ++
Sbjct: 149 PVGKDETENVEVRKVGTPRTFDLDIKDHVDLGAALGLDFEKAAELSGARFSLMKGKIARL 208

Query: 276 FQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
            + L  +M      +  Y E  TP +++      +G    +  ++F V    D  K  + 
Sbjct: 209 HRALAQFMLDTHTQQHGYTECYTPYIVNDSTLLGTGQLPKFGEDLFHVTRGGDETKLTQY 268

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDD 390
               P             + + ++LP++L      +R+E         GL+R   F + +
Sbjct: 269 LI--PTAEVTLTNTVRDTILAEKDLPLKLTAHSPCFRSEAGSHGKDTRGLIRQHQFDKVE 326

Query: 391 AHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAEN 446
                  E+ +    ++     +I K       ++ L T              +W  A+N
Sbjct: 327 MVQIVQPEKSYEALEEMVGHAENILKALELPYRVITLCTGDMGFGATKTYDLEVWVPAQN 386

Query: 447 IMKGV 451
             + +
Sbjct: 387 TYREI 391


>gi|257456350|ref|ZP_05621547.1| alanyl-tRNA synthetase [Treponema vincentii ATCC 35580]
 gi|257446436|gb|EEV21482.1| alanyl-tRNA synthetase [Treponema vincentii ATCC 35580]
          Length = 600

 Score = 70.2 bits (170), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 33/139 (23%), Positives = 61/139 (43%), Gaps = 10/139 (7%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFSSDELAQIEK 124
           D        H+  H++ +A++ +  +     G  I  +   +DF   QP +++E A++E+
Sbjct: 454 DHSEQTTAYHTATHLLHKALRMVLGDHVEQKGSNITAERLRFDFSHPQPMTAEEKAEVER 513

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLC 183
            + E I  D P   + +  E+A+          K E        + V +Y  G +  ++C
Sbjct: 514 IVNEQIQADLPVTMEIMPLEEAKRAGAMALFGEKYE--------DTVKVYSIGNFSKEVC 565

Query: 184 RGPHVRSTGQVKKFFKLMK 202
            GPHV  TG + KF    +
Sbjct: 566 GGPHVEHTGVLGKFSIQKE 584


>gi|261210116|ref|ZP_05924414.1| alanyl-tRNA synthetase [Vibrio sp. RC341]
 gi|260840881|gb|EEX67423.1| alanyl-tRNA synthetase [Vibrio sp. RC341]
          Length = 860

 Score = 70.2 bits (170), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 61/143 (42%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFS 115
             +E I  E  R+   + HS  H++  A++ +  E     G ++  +   +DF   +  +
Sbjct: 545 DQVEAIVDEQRRAAISLNHSATHLLHAALRKVLGEHVAQKGSLVRAETLRFDFSHLEAMT 604

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           + E+ ++E+ + + I R+       ++ ++A+          K          + V +  
Sbjct: 605 AAEIKEVERLVNQEIRRNHHIETHIMNIDEAKAKGAMALFGEKY--------DDQVRVLS 656

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G++  +LC G H  +TG +  F
Sbjct: 657 MGDFSTELCGGIHASNTGDIGLF 679


>gi|319651676|ref|ZP_08005803.1| histidyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
 gi|317396743|gb|EFV77454.1| histidyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
          Length = 424

 Score = 70.2 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 70/415 (16%), Positives = 133/415 (32%), Gaps = 61/415 (14%)

Query: 276 FQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           +Q +    R   +   Y EI TP      L+ +S        ++   +      +  R+ 
Sbjct: 20  WQLIEEKARELCEKFQYREIRTPIFEHTELFLRS---VGDTTDIVQKEMYTFEDRGGRSL 76

Query: 335 ALKPMNCPGHVAVFNHGLKSYREL----PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
            L+P    G  +     ++         PV+L   G ++R E   +     R R F Q  
Sbjct: 77  TLRP---EGTASAVRSFVEHKMYGDASQPVKLYYMGPMFRYERPQA----GRFRQFVQFG 129

Query: 391 AHVFCTKEQMFNECLKIHNLIISIYKDFGFE----------------KIMVKLSTRPEKR 434
                + +   +   ++  L +S+Y+  G +                     L      R
Sbjct: 130 VEAIGSADPAIDA--EVIALAMSLYRSMGLQKLKLIVNSLGDKESRSAHREALVNHFMPR 187

Query: 435 VGSDAL--WDDAENIMKGVLDTIKNSSQDRINTG-----VLLGEGAFYGPK--------- 478
           +G       +  E     +LD  ++   + + +       L  +   Y  K         
Sbjct: 188 IGEFCQDCQNRLEKNPMRILDCKQDREHELMKSAPSIIDYLNDDSKTYFEKVQKYLKNLD 247

Query: 479 FEYILKDAI--GRDWQCGTIQVDFNLPSRFNAF--------YVNSHSEKCHPVMIHRAVF 528
            ++I+   +  G D+   T     +    F A         Y     E   P        
Sbjct: 248 IDFIVDPNLVRGLDYYNHTAFEIMSDSEGFGAITTLCGGGRYNGLTEEIGGPEAPGIGFA 307

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRN 588
            S+ERFI  + E  K +LPL    I   + ++   A +Y   +   L+    S E D+ +
Sbjct: 308 LSVERFIAAL-EAEKVDLPLN-KDIDCYLVSLGEEAKDYTVGLLQKLRMAGYSAERDYLD 365

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             I  + +         + + G+ E     I ++   S    ++ L   I   T+
Sbjct: 366 RKIKAQFKAADRSNAKFVAVLGEDELKANKINVKSMESGEQTELGLDSFIEKFTE 420


>gi|260891941|ref|YP_003238038.1| seryl-tRNA synthetase [Ammonifex degensii KC4]
 gi|260864082|gb|ACX51188.1| seryl-tRNA synthetase [Ammonifex degensii KC4]
          Length = 427

 Score = 70.2 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 69/196 (35%), Gaps = 17/196 (8%)

Query: 265 VIFWHRKGWKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK 322
            +F+   G  + + LI++M         YEE+  P ++++     +G    +  +MF V 
Sbjct: 163 FVFYRGLGAALERALINFMLDLHTREHGYEEVFPPFLVNRESMVGTGQLPKFAEDMFKV- 221

Query: 323 CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE---PSGSLHG 379
                  +   F L P        +    +    +LP++   + + +R E         G
Sbjct: 222 -------EGEDFYLIPTAEVPVTNLHREEILDGGQLPLKYVAYSACFRAEAGAAGRETRG 274

Query: 380 LMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV---- 435
           L+R   F + +   FC  EQ   E  K+      + K  G    +V L T          
Sbjct: 275 LIRQHQFNKVELVKFCRPEQSEEELEKLVADAEEVLKRLGLPYRVVVLCTGDLGFAAAKT 334

Query: 436 GSDALWDDAENIMKGV 451
               +W  +    K +
Sbjct: 335 YDIEVWLPSYGAYKEI 350


>gi|150026060|ref|YP_001296886.1| histidyl-tRNA synthetase [Flavobacterium psychrophilum JIP02/86]
 gi|149772601|emb|CAL44084.1| Histidine--tRNA ligase [Flavobacterium psychrophilum JIP02/86]
          Length = 472

 Score = 70.2 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 53/344 (15%), Positives = 105/344 (30%), Gaps = 64/344 (18%)

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           E P +  +   V+R +         R R F Q DA V  +      + +++  L  S++ 
Sbjct: 135 EFPFKRYQIQPVWRADRPQK----GRFREFYQCDADVVGS--TSLWQEVELVQLYDSVFT 188

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENI-MKGVLDTIKNSSQDRINTGVLLGEGA-- 473
           D G   + +K++ R      ++ +    + I     LD +    +D +   ++    +  
Sbjct: 189 DLGLNGVTIKINNRKILSGIAEVIGASNKLIDFTVALDKLDKIGEDGVKKEMIEKGISET 248

Query: 474 ----------FYG------PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA--------- 508
                     F G       K   +L  +         +Q   +  +             
Sbjct: 249 AIEKVQPLFNFAGSISEKIAKLSVLLAASTEGMKGVEELQFICDNVTDLGLSSAILDLDV 308

Query: 509 -------FYVNSHSEKCHPVMIHRAVFGSIERF-----------------------IGIM 538
                  +Y  +  E   P  +     G   R+                       I ++
Sbjct: 309 TLARGLNYYTGAIFEVAPPKAVAMGSIGGGGRYDDLTGIFGLKNMSGVGISFGLDRIYLV 368

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
           IE          +  +AI         +YA +    L+   + +E    N  I  + +  
Sbjct: 369 IEELGLFPETVTTTSKAIFLNFGQEETKYAMKAITQLRKEGIKVELYPDNAKIAKQFQYA 428

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             + I + II G+ E       ++   S   QKVS  +   +L 
Sbjct: 429 EKRGILLAIIVGNDEMQNNQFAVKNLVSGEQQKVSFDELKSLLQ 472


>gi|302878619|ref|YP_003847183.1| histidyl-tRNA synthetase [Gallionella capsiferriformans ES-2]
 gi|302581408|gb|ADL55419.1| histidyl-tRNA synthetase [Gallionella capsiferriformans ES-2]
          Length = 424

 Score = 70.2 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 62/420 (14%), Positives = 123/420 (29%), Gaps = 61/420 (14%)

Query: 269 HRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLW--QQSGHWDSYRANMFAVKCAD 325
                +++      +R  +    Y  I  P V    L+        D     M++ +   
Sbjct: 16  LPDEAELWLWFEGVVRDWLASYGYRNIRMPLVEPTSLFCRAIGEVTDIVEKEMYSFED-- 73

Query: 326 DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRG 385
               +     L+P      V         Y   P RL   G ++R+E         R R 
Sbjct: 74  --SLNGDQLTLRPEGTASCVRAVLQHNLLYNA-PQRLYYSGPMFRHERPQK----GRYRQ 126

Query: 386 FTQD--DAHVFCTKEQMFNECLKIHNLIISI--------YKDFGFEKIMVKLSTRPEKRV 435
           F Q   +A  F   +    + L    L   +            G  +   +   +     
Sbjct: 127 FHQVGVEALGFAGPDIDAEQILMCARLWKKLGLTDVTLQLNTLGDVESRQRHRAKLIAYF 186

Query: 436 GSDALWDDAENIMK------GVLDTIKNSSQDRINTGV----LLGEGAF----------- 474
             +    DAE + +       +LD+   + Q+ I         L E A            
Sbjct: 187 EQNKELMDAEAVRRLHSNPLRILDSKNPAMQELIEAAPRLMDELDEAALSHFAAVQAILT 246

Query: 475 -YGPKFEYILKDAIGRDWQCGTI----------QVDFNLPSRFNAFYVNSHSEKCHPVMI 523
            +G  FE   +   G D+   T+          Q       R++        +    +  
Sbjct: 247 QHGVAFEINPRLVRGLDYYNRTVFEWVTTRLGAQGTICAGGRYDGLVEQIGGKPAPAMGF 306

Query: 524 HRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIE 583
              +    ER + ++ E   G        +   V      A   A  +A  L+ + L + 
Sbjct: 307 AMGI----ERLLVLLQE--AGMALPKP-QVDVYVVHQGELAARLASSVAEQLRDYGLRVV 359

Query: 584 TDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
                 +   ++++       + ++ GD EA    + ++       ++VS+ +    + K
Sbjct: 360 MHCGGGSFKSQMKKADASGACVAVVIGDDEAQSNEVSVKPMQGGAQERVSVQNLATTINK 419


>gi|325927198|ref|ZP_08188459.1| alanyl-tRNA synthetase [Xanthomonas perforans 91-118]
 gi|325542426|gb|EGD13907.1| alanyl-tRNA synthetase [Xanthomonas perforans 91-118]
          Length = 882

 Score = 70.2 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/164 (21%), Positives = 65/164 (39%), Gaps = 16/164 (9%)

Query: 42  AINGKVCDLSDPVREGSIEIIT------PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVA 95
              G+       + EG++ +            R   ++ HS  H++  A++ +       
Sbjct: 531 KFAGQFHGHVGRISEGALALGDVLAGGIDTQRRGKTILNHSATHLLHAALREVLGTHVQQ 590

Query: 96  IGP-IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            G  +  D   +DF   QP ++DELA IE+K+   +  +       ++ ++A +      
Sbjct: 591 KGSLVAPDRLRFDFSHFQPITADELAVIERKVNAEVRANHGVEVHNMAMQEALDFGAMAL 650

Query: 155 EAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
              K          ENV + + G +  +LC G HV  TG +  F
Sbjct: 651 FGEKY--------GENVRVLKMGGYSTELCGGTHVTRTGDIGLF 686


>gi|229015418|ref|ZP_04172422.1| Seryl-tRNA synthetase [Bacillus cereus AH1273]
 gi|229021624|ref|ZP_04178212.1| Seryl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228739670|gb|EEL90078.1| Seryl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228745876|gb|EEL95874.1| Seryl-tRNA synthetase [Bacillus cereus AH1273]
          Length = 424

 Score = 70.2 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 41/223 (18%), Positives = 83/223 (37%), Gaps = 21/223 (9%)

Query: 242 EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEIN 295
           E + H  LA ++ +          GS  +F+   G ++ + LIS+M     D   YEE+ 
Sbjct: 136 EPKPHWDLATDLGILDFERAGKVTGSRFVFYKGAGARLERALISFMLDLHTDEHGYEEVL 195

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
            P ++++     +G    +  + F +        +   + L P        +    + S 
Sbjct: 196 PPYMVNRASMTGTGQLPKFEEDAFRI--------ESEDYFLIPTAEVPVTNMHRDEILSK 247

Query: 356 RELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
            +LP+R A F S +R+E   +     GL+R   F + +   F   E  + E  K+ N   
Sbjct: 248 EQLPIRYAAFSSCFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYEELEKLTNDAE 307

Query: 413 SIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENIMKGV 451
            + +       ++ + T              +W  +    + +
Sbjct: 308 RVLQLLELPYRVMSMCTGDLGFTAAKKYDIEVWIPSYGTYREI 350


>gi|224532290|ref|ZP_03672922.1| glycyl-tRNA synthetase [Borrelia valaisiana VS116]
 gi|224511755|gb|EEF82161.1| glycyl-tRNA synthetase [Borrelia valaisiana VS116]
          Length = 445

 Score = 70.2 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 63/432 (14%), Positives = 128/432 (29%), Gaps = 70/432 (16%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKDDYEEIN---TPQVLDQHLWQQSGHWDSYRANMF 319
           SG   +   G ++ + +     + +   +E I    +   +   +W+ SGH D +  +M 
Sbjct: 28  SGAWDYGPLGVELKKNIKKEWWKSMVYLHENIVGLDSAIFMRSEIWKASGHVDGFSDSMV 87

Query: 320 AVKCADDTIKDL--------------------------------------RTFALKPMNC 341
             K      +                                            L+P   
Sbjct: 88  DCKDCKSRFRADFIDLSKNCPNCKVGNNFTAPRSFNLMFKTHIGVVEDSSSEIYLRPETA 147

Query: 342 PGHVAVFNHGLKSYR-ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQ 399
            G    F + L S R ++P  +A+ G  +RNE   + + + R   F Q +   F    + 
Sbjct: 148 QGIFVNFRNVLDSSRLKIPFGIAQVGKAFRNEIV-TKNFIFRTCEFEQMEMQFFVHPKQI 206

Query: 400 MFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSS 459
               C    N +    +        ++       ++   A         K   D      
Sbjct: 207 DEWFCYWQQNRMNFFIETLKIRPDRLRFKAHDSTQLAHYA---------KSAFDI----- 252

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
           +     G    EG      ++           +      D     R+  + + + +    
Sbjct: 253 EYEFPFGFQEVEGIHNRGNYDLTQHSKFSNKPKIFEYH-DLLTKERYVPYVIETSAGLTR 311

Query: 520 PVMIHRAVFGSIERFIGIMIENFK---GNLPLWLSPIQAIVTTITSSA--VEYAQEIANL 574
            V++      S E+    + +  K     L   L+P +  +  +      +E A+ I   
Sbjct: 312 SVLMTLCDAYSEEK----LSDGDKRIVLRLHPKLAPYKIAIFPLVKKIELIEIARRIYME 367

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           L      I  D  N TI  + R       P  +        ++++ IR   + T +++ +
Sbjct: 368 LCD-DFHIFYDD-NGTIGKRYRRQDEIGTPYCVTVDYNTVEDKTVTIRERNNMTQKRIFI 425

Query: 635 LDAIPILTKESL 646
            D    +  E L
Sbjct: 426 NDLYSHIKTEIL 437


>gi|225849840|ref|YP_002730074.1| alanyl-tRNA synthetase [Persephonella marina EX-H1]
 gi|225645058|gb|ACO03244.1| alanyl-tRNA synthetase [Persephonella marina EX-H1]
          Length = 878

 Score = 70.2 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 24/136 (17%), Positives = 60/136 (44%), Gaps = 9/136 (6%)

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQ 121
             +D R   +  H+  H++  A++++  +     G ++  D   +DF   +  + +++ +
Sbjct: 559 VDKDTRLDIMRHHTATHLLHAALRNLLGDHVKQAGSLVHPDYLRFDFTHFESLTDEDIKR 618

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +E+ + E I ++ P + + + +++A +             +      + V +   G   +
Sbjct: 619 VEELVNEEIMKNEPVICKEMPYDEAIK--------SGAIAIFDEKYGDTVRVISAGISTE 670

Query: 182 LCRGPHVRSTGQVKKF 197
           LC G HV  TG +  F
Sbjct: 671 LCGGTHVSRTGDIGYF 686


>gi|145219987|ref|YP_001130696.1| seryl-tRNA synthetase [Prosthecochloris vibrioformis DSM 265]
 gi|189083579|sp|A4SFD5|SYS_PROVI RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|145206151|gb|ABP37194.1| seryl-tRNA synthetase [Chlorobium phaeovibrioides DSM 265]
          Length = 430

 Score = 70.2 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/221 (14%), Positives = 72/221 (32%), Gaps = 21/221 (9%)

Query: 244 RDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEINTP 297
           ++H +L + + +          G+G   +  KG ++ + LI++M     +   Y+E+  P
Sbjct: 142 KNHLELGKSLGILDFERGAKVSGAGFPVYVGKGARLERALINFMLDSHTEKHGYKEVFPP 201

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++++   + +G W  +   ++                L P        +    L     
Sbjct: 202 FMVNRESLRGTGQWPKFAGEVY--------HAPEDELYLIPTAEVPVTNLHRGELLETES 253

Query: 358 LPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           LP+  A + + +R E         G +RV  F + +   F   E  +     I     +I
Sbjct: 254 LPISYAAYSACFRREAGSYGKETRGFLRVHQFNKVEMVKFTKPEDSYQALEDIRGHAEAI 313

Query: 415 YKDFGFEKI----MVKLSTRPEKRVGSDALWDDAENIMKGV 451
            +                +    +     +W  AE      
Sbjct: 314 LRALEIPYRVLLLCSGDISANAAKCYDIEVWSPAEEKYLEA 354


>gi|224044296|ref|XP_002187059.1| PREDICTED: mitochondrial ribosomal protein L39 [Taeniopygia
           guttata]
          Length = 195

 Score = 70.2 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 37/75 (49%), Gaps = 4/75 (5%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVRE-GSIEIITPEDPRSLAV---IRHS 76
           +T  + A  +S    K +V  +++G++ D+  P+ +   I+ +T +D     V      S
Sbjct: 101 STPYNCAMHLSEWHCKNSVLASVDGEIWDMYRPLTKSCEIQFLTFKDEDPEEVNKAYWRS 160

Query: 77  CAHIMAEAVQSIWPE 91
           CA IMA  ++  + +
Sbjct: 161 CAMIMACVLERAFKD 175


>gi|323467135|gb|ADX70822.1| Serine-tRNA ligase [Lactobacillus helveticus H10]
          Length = 502

 Score = 70.2 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 78/188 (41%), Gaps = 9/188 (4%)

Query: 272 GWKIFQTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G  + + + ++ +    KDDY E+  P +++    Q +G +  +  +++ +   DD  K 
Sbjct: 237 GALLERAVFNFFLDENTKDDYTEVIPPYLVNDASMQGTGQFPKFHEDVYTIVDNDDPDKP 296

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFT 387
            R   L P      V  F + +    +LP+ +      +R+E   +     GL+R+  F 
Sbjct: 297 -RDLTLIPTAEVPLVNYFRNEIIHENKLPINVTALSPAFRSEAGSAGRDTRGLIRMHEFR 355

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +    C  ++ ++E  K+ +    + +  G    +V LST              +W  
Sbjct: 356 KVEMVKVCKPDESWDELEKLTHNAEHLLQKLGLPYHVVALSTGDASFTSAKTYDLEVWMP 415

Query: 444 AENIMKGV 451
           A++  + +
Sbjct: 416 AQDKYREI 423


>gi|117928006|ref|YP_872557.1| glycyl-tRNA synthetase [Acidothermus cellulolyticus 11B]
 gi|117648469|gb|ABK52571.1| glycyl-tRNA synthetase [Acidothermus cellulolyticus 11B]
          Length = 465

 Score = 70.2 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 60/449 (13%), Positives = 137/449 (30%), Gaps = 105/449 (23%)

Query: 270 RKGWKIFQTLISYMRRKIKDDYEEIN---TPQVLDQHLWQQSGHWDSY------------ 314
             G ++   +     + +    E+I    +  +L+  +W+ SGH  ++            
Sbjct: 42  PLGVELKNNVKRQWWKAMVHGREDIVGLDSCVILNPIVWKTSGHLTAFVDPLTECLVCHH 101

Query: 315 -------------------RANMFAVKCADDTIK----DLRTF----------------- 334
                                 +  V C D   K    + R F                 
Sbjct: 102 RFRADELEAAYEARHRRPPAHGLADVTCPDCGAKGSFTEPRMFNGLLKTFLGPVEDESAV 161

Query: 335 -ALKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
             L+P    G    F +    + R+ P  +A+ G  +RNE +   + + R R F Q +  
Sbjct: 162 AYLRPETAQGIFVNFLNVQQTARRKPPFGIAQQGKSFRNEITPG-NFIFRTREFEQMEME 220

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
            F              +  ++ Y + G +   ++L   P+         +   +  K  +
Sbjct: 221 FFVKPGTDEEWHQYWIDTRLAWYVNLGIKPENLRLYEHPK---------EKLSHYSKRTV 271

Query: 453 DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
           D         +    L G            + +    D    +     +L      ++  
Sbjct: 272 DIEYRFGFPGLEWAELEG------------IANRTDFDLSAHSAASGVDLS-----YFDQ 314

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPL----------------WLSPIQAI 556
              ++  P +I     G     +  +++ +  +                    L+P++  
Sbjct: 315 ETGQRWIPYVIE-PAAGVDRCVLTFLLDAYAEDEAPTAQGGVEKRTVLRLDHRLAPVKVA 373

Query: 557 VTTIT--SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
           V  ++        A++IA  L+ +  ++E D     I  + R       P  +       
Sbjct: 374 VLPLSRNPDLSPKARDIAAELRKY-WNVEFDDAAA-IGRRYRRQDEIGTPYCVTVDFDTL 431

Query: 615 SERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +++++ +R   S   ++V +   +  LT+
Sbjct: 432 NDQAVTVRDRDSMKQERVGIDALVGYLTE 460


>gi|148642463|ref|YP_001272976.1| glycyl-tRNA synthetase [Methanobrevibacter smithii ATCC 35061]
 gi|261349423|ref|ZP_05974840.1| glycine--tRNA ligase [Methanobrevibacter smithii DSM 2374]
 gi|148551480|gb|ABQ86608.1| glycyl-tRNA synthetase [Methanobrevibacter smithii ATCC 35061]
 gi|288861785|gb|EFC94083.1| glycine--tRNA ligase [Methanobrevibacter smithii DSM 2374]
          Length = 564

 Score = 70.2 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/147 (17%), Positives = 50/147 (34%), Gaps = 11/147 (7%)

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG-------NLPLWLSPIQAIV- 557
           F         EK  P +I    FG       +++ +FK             ++P+Q  + 
Sbjct: 417 FEDVEEEISGEKIVPHVIE-PSFGIDRIVYSVLLHSFKETDTKDYFKFAPSVAPVQVGIY 475

Query: 558 -TTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASE 616
                    E A EI + L+     +E D    TI  +        IP+ I        +
Sbjct: 476 PLVNKEGPREIAIEITDKLRESGFKVEYDVSG-TIGKRYARADEIGIPLAITVDFDSLED 534

Query: 617 RSIGIRRFGSTTTQKVSLLDAIPILTK 643
             + +R   S   +++++ +    L +
Sbjct: 535 NKVTVRNRDSEAQERIAIDEIKDYLEE 561



 Score = 46.3 bits (108), Expect = 0.018,   Method: Composition-based stats.
 Identities = 24/98 (24%), Positives = 41/98 (41%), Gaps = 7/98 (7%)

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR-ELP 359
            +   + S  W+         K       D   + ++P    G   +F    + +R +LP
Sbjct: 128 PECGGKLSNIWNY----NLMFKTMIGAKGDKVGY-MRPETAQGIFILFKRLERFFRGKLP 182

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK 397
             + + G  YRNE S    G++R+R FTQ +A +F   
Sbjct: 183 FGVVQLGKAYRNEISPR-QGVIRLREFTQAEAEIFLNP 219



 Score = 39.4 bits (90), Expect = 2.0,   Method: Composition-based stats.
 Identities = 15/76 (19%), Positives = 32/76 (42%), Gaps = 2/76 (2%)

Query: 256 FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK--DDYEEINTPQVLDQHLWQQSGHWDS 313
           F I    SG   +   G  +   ++   R++    + + EI  P V+ + + + SGH D+
Sbjct: 20  FEIYSGVSGFTDYGPLGASLKNNIMQKWRKQYVSGEGFYEIEGPTVMPKEVLKASGHVDN 79

Query: 314 YRANMFAVKCADDTIK 329
           +   M   +   +  +
Sbjct: 80  FTDPMTKCEECGEVFR 95


>gi|126652931|ref|ZP_01725073.1| seryl-tRNA synthetase [Bacillus sp. B14905]
 gi|126590261|gb|EAZ84383.1| seryl-tRNA synthetase [Bacillus sp. B14905]
          Length = 426

 Score = 70.2 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 43/357 (12%), Positives = 112/357 (31%), Gaps = 48/357 (13%)

Query: 107 DFDKEQPFSSDELAQIEKKMQEIIARDSPF---LKQYLSHEKARELFESKKEAYKVEILE 163
           DF+       + +A+ E+   E            +   + ++         +  K   ++
Sbjct: 30  DFENLDAKRRELIAKTEELKAERNKVSEQISVMKRNKENADEVIARMRQVGDEIKELDIQ 89

Query: 164 SIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
               ++              R P+V          +   V    W             G 
Sbjct: 90  LNDVEDRFKDMMM-------RLPNVPHESVPVGTTEDDNVEEYTW-------------GE 129

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYM 283
                 ++  +     + +  D  + A+           S  +F+   G ++ + L+++M
Sbjct: 130 IPAFDFDIKAHWDLATDLKIVDFERGAKVTG--------SRFLFYRGLGARLERALMTFM 181

Query: 284 RRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
                +   YEE+  P ++++     +G    +  ++F +        +   + + P   
Sbjct: 182 MDLHAEEHGYEEMLPPVIVNRDSLTGTGQLPKFEEDVFKL--------EETDYFMIPTAE 233

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKE 398
                 +   + +   LP   A + + +R+E   +     GL+R   F + +   F   E
Sbjct: 234 VPVTNFYRDEILTAEALPQGFAAYSACFRSEAGSAGRDTRGLIRQHQFNKVELVRFVKPE 293

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENIMKGV 451
           + + +   +      + +  G     +K+ T              +W  A+N+ + +
Sbjct: 294 ESYEQLELLTGHAEKVLQLLGLPYRKLKMCTADLGFTAAKKYDLEVWIPAQNMYREI 350


>gi|194335210|ref|YP_002017004.1| glycyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1]
 gi|194307687|gb|ACF42387.1| glycyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1]
          Length = 491

 Score = 70.2 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 55/351 (15%), Positives = 107/351 (30%), Gaps = 51/351 (14%)

Query: 308 SGHWDSYRANMFAVKCADDTIKDLRTFAL-KPMNCPGHVAVFNH-GLKSYRELPVRLAEF 365
           SG W   R      +C    + D       +P    G    F++    S  ++P  +A+ 
Sbjct: 170 SGDWTEVRQFNLMFQCNMGAVADKSNIVYLRPETAQGIFVNFHNVRESSRMKVPFGIAQI 229

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY-KDFGFEKIM 424
           G  +RNE     + + R+  F Q +   F                  + Y    G  K  
Sbjct: 230 GKAFRNEIVKG-NFIFRMVEFEQMEMQYFVKPGTQAEAFEAWREERFAWYTSALGLRKEK 288

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +      +    +D  +D                 +     G+   EG     + ++ LK
Sbjct: 289 LHWYKHDKLAHYADLAYDI----------------KFEFPFGIEEIEGIH--SRTDFDLK 330

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----- 539
                               +   +     +E+  P ++  +  G    F+ ++      
Sbjct: 331 -------------QHQEYSGKNMEYIDQLTNERYLPYVVETSA-GCDRLFLALLADAYTE 376

Query: 540 ------ENFKGNLPLWLSPIQAIVTTITSSAV--EYAQEIANLLKSHHLSIETDFRNETI 591
                 E     L   ++PI+A V  +       E A  +   L + HL ++ D    +I
Sbjct: 377 DTVDGDERVVLKLSPKVAPIKAAVLPLMKKCGMGEMASLLREELSAAHL-VQYDDAG-SI 434

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             + R       P  I    +   E S+ +R   + T +++ +      L 
Sbjct: 435 GKRYRRQDEIGTPFCITVDHQSLEENSVTVRYRDTATQERIEISRVREFLA 485


>gi|312868969|ref|ZP_07729149.1| serine--tRNA ligase [Lactobacillus oris PB013-T2-3]
 gi|311095533|gb|EFQ53797.1| serine--tRNA ligase [Lactobacillus oris PB013-T2-3]
          Length = 433

 Score = 70.2 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 48/323 (14%), Positives = 105/323 (32%), Gaps = 44/323 (13%)

Query: 137 LKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKK 196
            +   S ++A +      +  K          E V    +     + R P+V   G    
Sbjct: 63  KRNGESADEAIKETRELGDKIKQL-------DEQVEANDEELHDKMSRLPNVPHDGVPVS 115

Query: 197 FFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLF 256
             +   V             L ++         E   +    E+    D  +  +     
Sbjct: 116 LTEDGAVE------------LRKVGRIRDFD-FEPKHHWDVGEQLGILDFDRAGKVSG-- 160

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYR 315
                 S  +++   G ++ + + ++M    +KD Y E+  P +++      +G +  ++
Sbjct: 161 ------SRFVYYLGLGAQLERAVYNFMLDEHMKDGYTEVLPPYIVNADSMYGTGQFPKFK 214

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
             ++ V        +     L P         +   +    ELPV +      +R+E   
Sbjct: 215 EGVYQV--------NGEDMTLIPTAEVPLTNYYRGEVIPEEELPVYVTALTPCFRSEAGA 266

Query: 376 S---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
           +     GL+R+  F + +   +   E  ++E  K+     +I K       ++ L+T   
Sbjct: 267 AGRDTRGLIRMHQFNKVEMVKYTKPENSWDELEKMTANAENILKKLDIPYHVITLTTSDM 326

Query: 433 KRVGSD----ALWDDAENIMKGV 451
               S+     LW  A+   + V
Sbjct: 327 SFTASETHDLELWMPAQKKYREV 349


>gi|313889655|ref|ZP_07823298.1| serine--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026]
 gi|313121952|gb|EFR45048.1| serine--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026]
          Length = 425

 Score = 70.2 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 74/193 (38%), Gaps = 16/193 (8%)

Query: 267 FWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD 325
           F+   G ++ + L ++M     K+ Y+EI  P +++      +G +  ++ + F +   +
Sbjct: 165 FYKNLGARLERALYNFMLDEHAKEGYQEIIPPYMVNHDSMFGTGQYPKFKEDTFELADTN 224

Query: 326 DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMR 382
                   F L P         +   +   +ELP+        +R+E   +     GL+R
Sbjct: 225 --------FVLIPTAEVPLTNYYRGEILDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIR 276

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSD 438
           +  F + +   F   E+ ++E  K+     +I +       ++ L T             
Sbjct: 277 LHQFHKVEMVKFAKPEESYDELEKMTTNAENILQKLELPYRVIALCTGDMGFSAAKTYDV 336

Query: 439 ALWDDAENIMKGV 451
            +W  A+N  + +
Sbjct: 337 EVWIPAQNTYREI 349


>gi|108803618|ref|YP_643555.1| glycyl-tRNA synthetase [Rubrobacter xylanophilus DSM 9941]
 gi|108764861|gb|ABG03743.1| glycyl-tRNA synthetase [Rubrobacter xylanophilus DSM 9941]
          Length = 466

 Score = 70.2 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 57/334 (17%), Positives = 111/334 (33%), Gaps = 25/334 (7%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR-ELPVRLAEFGSVYRNEPS 374
            N+                 L+P    G    F + L++ R ++P  +A+ G  +RNE +
Sbjct: 147 FNLMFETYTGPVKSPENLAYLRPETAQGIFVNFKNVLQTSRVKVPFGIAQIGKSFRNEIT 206

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              + + R R F Q +   F                    Y   G     ++L   P+++
Sbjct: 207 PG-NFIFRTREFEQMEMEFFVEPGTDEEWHEYWIEERREWYTRLGIRPENLRLYEHPKEK 265

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRIN--TGVLLGEGAFY-GPKFEYILKDAIGRDW 491
           +   + +      ++        S  + I   T   L   + Y G K EY  + A  R +
Sbjct: 266 L---SHYSKRTVDIEYNFPFAGWSELEGIANRTDYDLRRHSEYSGEKLEYFDQ-AKNRSY 321

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLS 551
               I+    +     A  V+++ E+  P        G +ER            L   ++
Sbjct: 322 IPYVIEPAAGVDRILLALLVDAYHEEEAP-----NAKGELER-------RTVLKLHPRVA 369

Query: 552 PIQAIVTTITSS--AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIIC 609
           P +A V  +T        A+ + + LK     +  D    +I  + R       P  +  
Sbjct: 370 PTKAAVFPLTKKEPVSAVARRLYDDLKG-DYRLFYDDSG-SIGRRYRRQDEAGTPFCVTV 427

Query: 610 GDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
                 ++ + IR   +   +++ +      L K
Sbjct: 428 DFDTLEDKKVTIRDRDTMEQERIPIEAVRDRLAK 461


>gi|317493956|ref|ZP_07952373.1| alanyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316918283|gb|EFV39625.1| alanyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 875

 Score = 70.2 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/148 (21%), Positives = 59/148 (39%), Gaps = 10/148 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFS 115
            S+E    E  RS   + HS  H++  A++ +  +     G ++ D    +DF   +   
Sbjct: 546 DSVEATIDEARRSRIRLNHSATHLLHAALRQVLGDHVSQKGSLVSDRNLRFDFSHFEAMK 605

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            +++ Q+E  +   I R+ P     +  E A+          K          E+V +  
Sbjct: 606 PEQIRQVEDIVNAQIRRNLPIETNIMDLEDAKAKGAMALFGEKY--------DESVRVLS 657

Query: 176 QGEW-FDLCRGPHVRSTGQVKKFFKLMK 202
            G++  +LC G H R TG +  F    +
Sbjct: 658 MGDFSTELCGGTHARQTGDIGLFRITSE 685


>gi|124003830|ref|ZP_01688678.1| histidyl-tRNA synthetase [Microscilla marina ATCC 23134]
 gi|123990885|gb|EAY30352.1| histidyl-tRNA synthetase [Microscilla marina ATCC 23134]
          Length = 467

 Score = 70.2 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 38/92 (41%)

Query: 551 SPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           + +Q + T     A  Y        ++  +S E       +N + +  + K IP ++I G
Sbjct: 370 ASVQVMFTNFDPKAEAYTLPFLPRFRNRGISCEIFPDAAKLNKQFKYANRKSIPYVVIVG 429

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           ++E     + ++   S   + +++ + I  L 
Sbjct: 430 EEEMKSGKLTLKNMDSGEQEALTVDEIIEKLK 461



 Score = 38.2 bits (87), Expect = 4.6,   Method: Composition-based stats.
 Identities = 31/225 (13%), Positives = 67/225 (29%), Gaps = 32/225 (14%)

Query: 269 HRKGWK-----IFQTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV-- 321
             KG +     +     +Y+   IK  +++     +    + + S     Y      +  
Sbjct: 8   LPKGTRDFGPEVMAK-RNYILDTIKSTFQKFGFAPLETPSIEKLSVLTGKYGDEGDQLIF 66

Query: 322 --------------KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE---LPVRLAE 364
                            D+  K L                F   +  +R+    P +  +
Sbjct: 67  KILNSGDYLGKVTQDDIDEGAKHLTPKIADKALRYDLTVPFARFVVMHRDKLAFPFKRYQ 126

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
              V+R    G      R R F Q DA V  T   +     +I  +I  +    G +   
Sbjct: 127 IQPVWR----GDRPQKGRYREFYQCDADVVGTDSLICEA--EIIIMINEVLPKLGIDDFS 180

Query: 425 VKLSTRPE-KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
           +K++ R     +      ++    +   +D +    +D++   + 
Sbjct: 181 LKINNRKVLTGIAQVIGHEERIGDICVAIDKLDKIGKDKVIEELA 225


>gi|163938025|ref|YP_001642909.1| seryl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|229009527|ref|ZP_04166756.1| Seryl-tRNA synthetase [Bacillus mycoides DSM 2048]
 gi|229053863|ref|ZP_04195300.1| Seryl-tRNA synthetase [Bacillus cereus AH603]
 gi|229131024|ref|ZP_04259940.1| Seryl-tRNA synthetase [Bacillus cereus BDRD-ST196]
 gi|229165006|ref|ZP_04292804.1| Seryl-tRNA synthetase [Bacillus cereus AH621]
 gi|163860222|gb|ABY41281.1| seryl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|228618458|gb|EEK75485.1| Seryl-tRNA synthetase [Bacillus cereus AH621]
 gi|228652436|gb|EEL08357.1| Seryl-tRNA synthetase [Bacillus cereus BDRD-ST196]
 gi|228721473|gb|EEL72990.1| Seryl-tRNA synthetase [Bacillus cereus AH603]
 gi|228751738|gb|EEM01535.1| Seryl-tRNA synthetase [Bacillus mycoides DSM 2048]
          Length = 424

 Score = 70.2 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 41/225 (18%), Positives = 83/225 (36%), Gaps = 21/225 (9%)

Query: 240 ESEKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEE 293
             E + H  LA ++ +          GS  +F+   G ++ + LIS+M     D   YEE
Sbjct: 134 TYEPKPHWDLATDLGILDFERAGKVTGSRFVFYKGAGARLERALISFMLDLHTDEHGYEE 193

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           +  P ++++     +G    +  + F +        +   + L P        +    + 
Sbjct: 194 VLPPYMVNRASMTGTGQLPKFEEDAFRI--------ESEDYFLIPTAEVPVTNMHRDEIV 245

Query: 354 SYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
           S  +LP+R A F S +R+E   +     GL+R   F + +   F   E  + E  K+ N 
Sbjct: 246 SKEQLPIRYAAFSSCFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYEELEKLTND 305

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENIMKGV 451
              + +       ++ + T              +W  +    + +
Sbjct: 306 AERVLQLLELPYRVMSMCTGDLGFTAAKKYDIEVWIPSYGTYREI 350


>gi|161507424|ref|YP_001577378.1| histidyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
 gi|172048276|sp|A8YUZ9|SYH_LACH4 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|160348413|gb|ABX27087.1| Histidyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
          Length = 428

 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 67/424 (15%), Positives = 130/424 (30%), Gaps = 73/424 (17%)

Query: 276 FQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           +Q +    R      +Y EI TP       ++         + +   +  D   K  R  
Sbjct: 20  WQKVEETARNFFNRANYREIRTP---SFENYEIFSRSSGDSSEIVEKQMYDFNDKGGRHI 76

Query: 335 ALKPMNCPGHVAVF--NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
           AL+P    G V  +  +         P  +    S +R E   +     R R F Q    
Sbjct: 77  ALRPEGTAGVVRAYVEDKMYAPEVVKPFNVFYMESTFRYERPQA----GRQREFHQIGVE 132

Query: 393 VFCTKEQMFNECLKIHNL----------IISIYKDFGFEKIMVKLSTRPEKRVG--SDAL 440
            F +   + +    +                     G E++                D L
Sbjct: 133 SFGSSNPLADVQTIMMGHDLLGELGVKNYQLHINTLGNEQVRKGYHDALVNYFTPVKDEL 192

Query: 441 WDDAENIMKG----VLDT------------------------------IKNSSQDRINTG 466
            +D++  ++     +LD+                              +K   Q  I+  
Sbjct: 193 SEDSQRRLRDNPLRILDSKDDRDKKFLPDAPKIRDFLDDNSKANFESILKMLDQLGIDYV 252

Query: 467 VLL----GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
           +      G   + G  FE++++D    +     +        R++      +  +   V 
Sbjct: 253 IDDDLVRGLDYYTGVIFEFMVEDKSLWESATTILGGG-----RYDHLVEEFNGPETPAV- 306

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSI 582
                FG  E  + +++E     L      I   +T I     + A EIA  L+      
Sbjct: 307 ----GFGIGEERLMLVLEKQNPEL-FKNEGIDFFITNIGEGTAQKAIEIARSLRKQGFEA 361

Query: 583 ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA--IPI 640
           + D   + +  + ++   +    +I  G+KE +   + I+R     T  +SL D   +  
Sbjct: 362 DFDVNQKKLKGQFKKADREGAKYVITLGEKELANGVLNIKRLADGKTIDLSLEDINDMNK 421

Query: 641 LTKE 644
           + KE
Sbjct: 422 VMKE 425


>gi|317133446|ref|YP_004092760.1| glycyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
 gi|315471425|gb|ADU28029.1| glycyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
          Length = 459

 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 54/378 (14%), Positives = 111/378 (29%), Gaps = 59/378 (15%)

Query: 270 RKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
             GW  F+ +  Y+ +          +    D   +           N+        T  
Sbjct: 115 PNGWS-FEQMQEYIEQHGIK-CPVCGSVHFTDIRSF-----------NLMFRTYQGVTED 161

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQ 388
                 L+P    G    F +  ++  R++P  + + G  +RNE +   +   R R F Q
Sbjct: 162 AKAQIYLRPETAQGIFVNFLNVQRTTRRKVPFGIGQIGKSFRNEITPG-NFTFRTREFEQ 220

Query: 389 DDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIM 448
            +   FC             +   +     G  +  ++L     + +   + +  A   +
Sbjct: 221 MELEFFCKPGTDLEWFYYWKDTCKNWLLALGLTEDGIRLRDHEAEEL---SFYSKATTDI 277

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
                  +         G+            +    D      Q G   +D+  P     
Sbjct: 278 -----EFRFPFGWGELWGIA-----------DRTDYDLNAHIRQSGKD-LDYFDPET--- 317

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----ENFKGNLP--------LWLSPIQAI 556
                 +E+  P +I     G+    +  +I    E   G             L+P +A 
Sbjct: 318 ------NERYVPYVIE-PSLGADRVALAFLINAYDEEAVGEKDVRTVLHLHPALAPYKAA 370

Query: 557 VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASE 616
           V  ++    + A  + + L       E D    +I  + R       P  I       ++
Sbjct: 371 VLPLSKKLGDAALLVYSELSKSFP-TEYDDAG-SIGKRYRRQDEIGTPFCITYDFDSQND 428

Query: 617 RSIGIRRFGSTTTQKVSL 634
             + +R   S   +++S+
Sbjct: 429 GCVTVRDRDSMKQERISI 446


>gi|260438422|ref|ZP_05792238.1| alanine--tRNA ligase [Butyrivibrio crossotus DSM 2876]
 gi|292809008|gb|EFF68213.1| alanine--tRNA ligase [Butyrivibrio crossotus DSM 2876]
          Length = 884

 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/162 (21%), Positives = 67/162 (41%), Gaps = 11/162 (6%)

Query: 45  GKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDG 103
           GKV   S  V +  + +   E  R      HS  H++ EA++ +        G  +  D 
Sbjct: 542 GKVTAGSFKVGD-KVTLTVDEKKRIDTAKNHSATHLLQEALRIVLGNHVEQAGSLVTPDR 600

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE 163
             +DF   QP + +E+ ++E  + E I +      + L+ E A++           + L 
Sbjct: 601 LRFDFTHFQPMTEEEIEKVEAIVNEQIEKSIDVETKVLAIEDAKK--------TGAKALF 652

Query: 164 SIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKFFKLMKVA 204
           +    + V +   G++  + C G HV +TG +  F  + +  
Sbjct: 653 NEKYGDTVRVVCMGDFSKEFCGGTHVSNTGLINSFKIVSESG 694


>gi|116072764|ref|ZP_01470030.1| seryl-tRNA synthetase [Synechococcus sp. BL107]
 gi|116064651|gb|EAU70411.1| seryl-tRNA synthetase [Synechococcus sp. BL107]
          Length = 425

 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/244 (15%), Positives = 83/244 (34%), Gaps = 20/244 (8%)

Query: 220 IYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED----GSGVIFWHRKGWKI 275
             G   +   E+ ++     E    +H ++A+ ++LF          S  +    +G ++
Sbjct: 117 PDGKNEDDNVEVRRWGTPRIEEGLEEHWQIAQRLNLFDTERSVRIAQSRFVTLIGQGARL 176

Query: 276 FQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
            + LI++M        Y E+  P +++      SG    +    F     D         
Sbjct: 177 ERALINFMLDLHTSKGYREVMPPVLVNTASLTGSGQLPKFAEESFRCAEDD--------L 228

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDA 391
            L P       ++    +    +LP+R + +   +R E         GL+R+  F + + 
Sbjct: 229 WLTPTAEVPVTSLHRDEIIPADQLPLRYSAYSPCFRREAGSYGRDTRGLIRLHQFNKVEL 288

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP----EKRVGSDALWDDAENI 447
           + F   +Q      +I     ++ +       ++ L T       +R     +W      
Sbjct: 289 YWFVHPDQSEEAHQQITADAEAVLQALDLPYRVLDLCTGDLGFSAQRTYDLEVWLPGAGA 348

Query: 448 MKGV 451
            + +
Sbjct: 349 FREI 352


>gi|281421902|ref|ZP_06252901.1| glycine--tRNA ligase [Prevotella copri DSM 18205]
 gi|281404144|gb|EFB34824.1| glycine--tRNA ligase [Prevotella copri DSM 18205]
          Length = 520

 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 56/345 (16%), Positives = 109/345 (31%), Gaps = 53/345 (15%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+                 L+P    G    +    K+   +LP  + + G  +RNE  
Sbjct: 194 FNLMFSTQMGAASDATSKVYLRPETAQGIFVDYLSVQKTGRMKLPFGICQIGKAFRNEVV 253

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
            +   + R+R F Q +   FC    E  + E  K   L        G E        +  
Sbjct: 254 -ARQFVFRMREFEQMEMQFFCQPGTEMKWFEYWKKVRLAWHEALGMGNENYRYHDHEKLA 312

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
                    + A +I            + ++  G    EG      F+            
Sbjct: 313 HYA------NAATDI------------EFKMPFGFKEVEGIHSRTNFD------------ 342

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF---------- 542
              +        R   ++    +E   P  +  ++ G    F+ +M  ++          
Sbjct: 343 ---LSQHEKYSGRSIKYFDPEKNESYVPYDVETSI-GVDRMFLSVMCHSYCEEKLENGET 398

Query: 543 --KGNLPLWLSPIQAIVTTITSSAV--EYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
                LP  L+P++  V  +       E A EI + LK H  +   D ++ +I  + R  
Sbjct: 399 RVVLRLPEALAPVKCAVFPLDKKYGLPELAHEIVDELKFHFNTHYGDPKD-SIGKRYRRQ 457

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
                P  I    +  ++  + +R   +   ++V++ D   I+ +
Sbjct: 458 DAIGTPFCITVDHETPNDHKVTLRYRDTMEQERVAISDLRSIIEE 502


>gi|227894178|ref|ZP_04011983.1| seryl-tRNA synthetase [Lactobacillus ultunensis DSM 16047]
 gi|227864019|gb|EEJ71440.1| seryl-tRNA synthetase [Lactobacillus ultunensis DSM 16047]
          Length = 435

 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 77/188 (40%), Gaps = 9/188 (4%)

Query: 272 GWKIFQTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G  + + + ++ +    K+ Y E+  P +++    Q +G +  +  +++ +   DD  K 
Sbjct: 170 GALLERAVFNFFLDENTKEGYTEVIPPYLVNDASMQGTGQFPKFHEDVYTIVDNDDPDKP 229

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFT 387
            R   L P      V  F + +    +LP+ +      +R+E   +     GL+R+  F 
Sbjct: 230 -RDLTLIPTAEVPLVNYFRNEIIHGSKLPINVTALSPAFRSEAGSAGRDTRGLIRMHEFR 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +    C  ++ ++E  K+ +    + +  G    +V LST              +W  
Sbjct: 289 KVEMVKVCKPDESWDELEKLTHNAEHLLQKLGLPYHVVALSTGDASFTSAKTYDLEVWMP 348

Query: 444 AENIMKGV 451
           A++  + +
Sbjct: 349 AQDKYREI 356


>gi|189499787|ref|YP_001959257.1| seryl-tRNA synthetase [Chlorobium phaeobacteroides BS1]
 gi|238692278|sp|B3ENZ9|SYS_CHLPB RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|189495228|gb|ACE03776.1| seryl-tRNA synthetase [Chlorobium phaeobacteroides BS1]
          Length = 427

 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/221 (14%), Positives = 74/221 (33%), Gaps = 21/221 (9%)

Query: 244 RDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEINTP 297
            DH  L  ++ +          G+G   +  KG ++ + L+++M     +   Y E+  P
Sbjct: 142 MDHLDLGNKLGILDFERGAKISGTGFPVYIGKGARLERALLNFMLDCHTENHGYTEVFPP 201

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++++   + +G W  +   ++ +        +       P        +  + +    E
Sbjct: 202 FMVNEDSLRGTGQWPKFADQVYYM--------NEDNLYAIPTAEVPVTNLHRNEMLKDEE 253

Query: 358 LPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           LP+  A + + +R E         G +RV  F + +   F   E+ ++   KI     +I
Sbjct: 254 LPISYAAYSACFRREAGSYGKDTRGFLRVHQFNKIEMVKFTRPEESYDALEKILQNAEAI 313

Query: 415 YKDFGFEKI----MVKLSTRPEKRVGSDALWDDAENIMKGV 451
                             +    +     +W  AE      
Sbjct: 314 LNALRIPYRVLLLCSGDISAGATKCYDIEVWSPAEKKYLEA 354


>gi|160932444|ref|ZP_02079834.1| hypothetical protein CLOLEP_01279 [Clostridium leptum DSM 753]
 gi|156868403|gb|EDO61775.1| hypothetical protein CLOLEP_01279 [Clostridium leptum DSM 753]
          Length = 428

 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 50/354 (14%), Positives = 111/354 (31%), Gaps = 30/354 (8%)

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +  ++++++++        + + L  +K R     + E+ K E          +    + 
Sbjct: 10  DGEKVKERIRKREMNLDSIVDEILDIDKKRRELTGEVESKKAEQNADSKKIPQLKKAGED 69

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIY--------GTAWNTQQ 229
                   P +     +    K      A         +LS           G     Q 
Sbjct: 70  ------TAPLMERMKALSAEIKEGDAKLAELEEKQKDLLLSLPNLPDEDVCAGGKEQNQP 123

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAE--DGSGVIFWHRKGWKIFQT---LISYMR 284
                     + E ++H +L   + +         +G   W  +GW        L  ++ 
Sbjct: 124 IRYFKEQPKFDYEPKNHVELCEGLGMIDYQRGAKIAGAGSWLYRGWGSRLEWALLNFFVN 183

Query: 285 RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
             IKD YE I  P +L       +G +  +   ++ ++    + +      + P      
Sbjct: 184 EHIKDGYEFILPPHMLGYECGYVAGQFPKFGDEVYWIENPTSSDRK----FMLPTAETAL 239

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
           V +    + S  +LP +   +   YR E         G++R   F + +   + T++Q  
Sbjct: 240 VNIHRDEILSEEDLPRKYIAYTPCYRREAGSYRAEERGMIRGHQFNKVEMVQYTTEDQSD 299

Query: 402 NECLKIHNLIISIYKDFGFEKIMVK----LSTRPEKRVGSDALWDDAENIMKGV 451
               ++      + ++ G    + K      +    R     +W  +  I K V
Sbjct: 300 AAFEELVGKAERLVQELGLHYRLSKLAAGDCSFSMARTYDIEVWIPSMGIYKEV 353


>gi|134098086|ref|YP_001103747.1| glycyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
 gi|291007455|ref|ZP_06565428.1| glycyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
 gi|133910709|emb|CAM00822.1| glycyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
          Length = 461

 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 54/334 (16%), Positives = 111/334 (33%), Gaps = 25/334 (7%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPS 374
            NM           +     L+P    G    F +    + R+ P  + + G  +RNE +
Sbjct: 140 FNMMLKTFLGPVESEEGLHYLRPETAQGIFVNFANVMTTARRKPPFGIGQIGKSFRNEIT 199

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              + + R R F Q +   F    +  +      +  +S Y D G E   ++        
Sbjct: 200 PG-NFIFRTREFEQMEMEYFVEPGEDESWHQYWIDQRMSWYTDLGIEPENLR-------- 250

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
                L++  ++ +        +        G   GE      + ++ L           
Sbjct: 251 -----LYEHPKDKLSHYSKRTVDIEYRFGFGGGEWGELEGIANRTDFDLTTHSNHSG-VD 304

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI----GIMIENFKGNLPLWL 550
               D    SR+  + +   +    P M+   +    E       G + E     L   L
Sbjct: 305 LSYFDQASKSRYRPYVIEPAAGVGRP-MMAFLIDAFHEDQAPNAKGGVDERTVLKLDRRL 363

Query: 551 SPIQAIVTTITSSAV--EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIII 608
           +P++  V  ++ +A     A+++A  L+ H  +IE D     I  + R H     P  + 
Sbjct: 364 APVKVAVLPLSRNAELSPKARDLATGLRKH-WNIEFDDAGA-IGRRYRRHDEIGTPFCVT 421

Query: 609 CGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
                 ++ ++ +R   +   ++V++      L 
Sbjct: 422 VDFDSLTDHAVTVRERDTMAQERVAMDKLEDYLA 455


>gi|66768815|ref|YP_243577.1| alanyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           8004]
 gi|81305217|sp|Q4UTR6|SYA_XANC8 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|66574147|gb|AAY49557.1| alanyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           8004]
          Length = 882

 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 65/164 (39%), Gaps = 16/164 (9%)

Query: 42  AINGKVCDLSDPVREGSIEIITPED------PRSLAVIRHSCAHIMAEAVQSIWPEVQVA 95
              G+       + EG++++            R   ++ HS  H++  A++ +       
Sbjct: 531 KFAGQFHGHVGRIAEGALKLGDVLSGGIDVQRRGKTILNHSATHLLHAALREVLGTHVQQ 590

Query: 96  IGP-IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            G  +  D   +DF   QP +++ELA IE+K+   +  +       ++ ++A +      
Sbjct: 591 KGSLVAPDRLRFDFSHFQPITAEELAVIERKVNAEVRTNHSVEVHNMAMQEALDFGAMAL 650

Query: 155 EAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
              K          E V + + G +  +LC G HV  TG +  F
Sbjct: 651 FGEKY--------GERVRVLKMGGYSTELCGGTHVSRTGDIGLF 686


>gi|21231177|ref|NP_637094.1| alanyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
 gi|24418692|sp|Q8P9X0|SYA_XANCP RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|21112818|gb|AAM41018.1| alanyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
          Length = 882

 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 65/164 (39%), Gaps = 16/164 (9%)

Query: 42  AINGKVCDLSDPVREGSIEIITPED------PRSLAVIRHSCAHIMAEAVQSIWPEVQVA 95
              G+       + EG++++            R   ++ HS  H++  A++ +       
Sbjct: 531 KFAGQFHGHVGRIAEGALKLGDVLSGGIDVQRRGKTILNHSATHLLHAALREVLGTHVQQ 590

Query: 96  IGP-IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            G  +  D   +DF   QP +++ELA IE+K+   +  +       ++ ++A +      
Sbjct: 591 KGSLVAPDRLRFDFSHFQPITAEELAVIERKVNAEVRTNHSVEVHNMAMQEALDFGAMAL 650

Query: 155 EAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
              K          E V + + G +  +LC G HV  TG +  F
Sbjct: 651 FGEKY--------GERVRVLKMGGYSTELCGGTHVSRTGDIGLF 686


>gi|78185909|ref|YP_373952.1| glycyl-tRNA synthetase [Chlorobium luteolum DSM 273]
 gi|78165811|gb|ABB22909.1| glycyl-tRNA synthetase [Chlorobium luteolum DSM 273]
          Length = 489

 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 48/351 (13%), Positives = 102/351 (29%), Gaps = 51/351 (14%)

Query: 308 SGHWDSYRANMFAVKCADDTIKDLRTFAL-KPMNCPGHVAVFNH-GLKSYRELPVRLAEF 365
           SG W   R      +C    + D       +P    G    F++    S  ++P  +A+ 
Sbjct: 170 SGDWTEVRQFNLMFQCNMGAVADSSGVVYLRPETAQGIFVNFHNVRESSRMKVPFGIAQI 229

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD-FGFEKIM 424
           G  +RNE     + + R+  F Q +   F                    Y    G     
Sbjct: 230 GKAFRNEIVKG-NFIFRMVEFEQMEMQYFVKPGTQAEAFEAWREERYQWYTRQLGIRPEK 288

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +      +    +D  +D                 +     G+   EG      F+    
Sbjct: 289 LHWYKHDKLAHYADLAYDI----------------KFEFPFGIEEIEGIHSRTDFD---- 328

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI----- 539
                      +        +   +     +E+  P ++  +  G    F+ I+      
Sbjct: 329 -----------LSRHQEYSGKNMEYVDQVTNERFIPYVVETSA-GCDRLFLAILSDAYSE 376

Query: 540 ------ENFKGNLPLWLSPIQAIVTTITSS--AVEYAQEIANLLKSHHLSIETDFRNETI 591
                 E     L   ++P++A V  +       E A ++ + L      ++ D    +I
Sbjct: 377 DVVDGEERVVLKLAPKVAPVKAAVLPLMKKGGMGEAAMKLRDELAESFP-VQYDDAA-SI 434

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             + R       P  I    +   + ++ +R   +   +++ +      +T
Sbjct: 435 GKRYRRQDEIGTPFCITVDHQSIEDGTVTVRFRDTAQQERIDMSQTAAFIT 485


>gi|87118881|ref|ZP_01074780.1| glycyl-tRNA synthetase [Marinomonas sp. MED121]
 gi|86166515|gb|EAQ67781.1| glycyl-tRNA synthetase [Marinomonas sp. MED121]
          Length = 458

 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 51/330 (15%), Positives = 102/330 (30%), Gaps = 14/330 (4%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+         + +     L+P    G    F + + S  R LP  +A+ G  +RNE +
Sbjct: 123 FNLMFKTNVGPMVDEESYTYLRPETAQGIFTNFKNVVDSTSRALPFGIAQIGKSFRNEIT 182

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
              + + RVR F Q +   FC    ++ ++E          + +  G E I  +  T  +
Sbjct: 183 PR-NFIFRVREFEQMELEFFCKPGEDEKWHETWVALRKQWWLDQGLGEENIEFEYVTGDD 241

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
               S +  D       G  +    +++   + G      A +G      +K+      +
Sbjct: 242 LSHYSKSTVDILYKFPHGFEELEGVANRTDYDLGSHTKAQAEFG--ITANVKENSDSTAK 299

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP 552
                +  N          ++  ++    ++        E  +              L+P
Sbjct: 300 LAVRDLAENKWEVPFCIEPSAGLDRGVLAVM---TEAYTEEELADGKSRTVLKFKPHLAP 356

Query: 553 IQAIVTT---ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIIC 609
           I+  +          V  A+E+ N L+   L          +    R H     PI +  
Sbjct: 357 IKVAIMPLKKNKPEIVALAKELKNKLQKLGLGRILYENTGNVGKGYRRHDEVGTPICVTV 416

Query: 610 GDK--EASERSIGIRRFGSTTTQKVSLLDA 637
                E     + +R   +     V   + 
Sbjct: 417 DFDSIEKEGAPVTVRDRDTMEQITVPAAEL 446


>gi|62550772|emb|CAG44460.1| histidyl t-RNA synthetase [Lactobacillus buchneri]
          Length = 428

 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 65/427 (15%), Positives = 128/427 (29%), Gaps = 59/427 (13%)

Query: 262 GSGVIFWHRKGWK--------IFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWD 312
            + V +   KG          ++Q +    R       Y  I TP       +       
Sbjct: 1   MTDVDYQRPKGTVDILPGEIEVWQKVEKIARDTFNQFGYRGIRTPIF---ENYNVFARNV 57

Query: 313 SYRANMFAVKCADDTIKDLRTFALKP--MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYR 370
              +++   +  D   K  R  AL+P          V N         P ++   G ++R
Sbjct: 58  GDTSDIVEKQMYDFDDKGGRRLALRPEGTAGTVRAYVENKLFGPEYPKPYKVYYMGPMFR 117

Query: 371 NEPSGSLHGLMRVRGFTQ--DDAHVFCTKEQMFNECLKIHNLIIS--------IYKDFGF 420
            E   S     R R FTQ   +A    + +       +                    G 
Sbjct: 118 YERPQS----GRQRQFTQIGCEALNSESPQIDVEVISEALEFFKRLGINDLKLTINTLGD 173

Query: 421 EKIMVKLSTRPEKRVG------SDALWDDAENIMKGVLDTIKNSSQDRI-NTGVLLGEGA 473
           ++            +       SD   +        VLD+     +  + N   +L   +
Sbjct: 174 KETRDAYHKALIDYLKPFYNQLSDDSKERMYKNPLRVLDSKDEQDKKIVANAPSILDSLS 233

Query: 474 FYGPKF---------------EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC 518
            Y  K+               E       G D+   TI    +    F   YV       
Sbjct: 234 DYSAKYFAEVKRLLDKLNIQYEIDSDMVRGLDYYTQTIFEIMSDSDVFGGGYVTVCGGGR 293

Query: 519 HPVMIHR--------AVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQE 570
           +  +I +          +G     + +++     +      P      +  ++  E A E
Sbjct: 294 YNGLISQLGGPDEGGIGYGIGVERLLLLVNKENPDFAPKYGPD-VYFASADNAGDELAFE 352

Query: 571 IANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
           + + ++ + +  + ++++  +  +I+E   +K     + G KE  E S  + +  S  TQ
Sbjct: 353 VLDKIRKNGVEADKNYQDIKVGSQIKEAIRRKARYYAVIGKKEVDEGSFELSKVDSDKTQ 412

Query: 631 KVSLLDA 637
            VS+ + 
Sbjct: 413 TVSVKEF 419


>gi|154502472|ref|ZP_02039532.1| hypothetical protein RUMGNA_00285 [Ruminococcus gnavus ATCC 29149]
 gi|153796868|gb|EDN79288.1| hypothetical protein RUMGNA_00285 [Ruminococcus gnavus ATCC 29149]
          Length = 879

 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 63/143 (44%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFS 115
              E+    + R+L+   HS  H++ +A++++        G  + ED   +DF      +
Sbjct: 548 DQAELCVDAEKRALSARNHSATHLLQKALRTVLGTHVEQAGSSVNEDRLRFDFSHFSAMT 607

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           ++EL ++E+ + E I    P   + +  E+AR+         K          + V +  
Sbjct: 608 AEELQKVEEIVNEQIVAGLPVKVENMPIEEARKTGAQALFGEKY--------GDVVRVVN 659

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G++  + C G HV++T ++  F
Sbjct: 660 MGDYSIEFCGGTHVKNTNEIMAF 682


>gi|17232504|ref|NP_489052.1| histidyl-tRNA synthetase [Nostoc sp. PCC 7120]
 gi|32130131|sp|Q8YMC2|SYH_ANASP RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|17134150|dbj|BAB76711.1| histidyl-tRNA synthetase [Nostoc sp. PCC 7120]
          Length = 462

 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 57/454 (12%), Positives = 138/454 (30%), Gaps = 76/454 (16%)

Query: 261 DGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDS---YRA 316
             SG   +     ++   L+  +RR  +   +  I TP V    + Q  G+      Y  
Sbjct: 11  TPSGFPEFLPSEKRLELYLLDTIRRVYESYGFTPIETPAVERLEVLQAKGNQGDNIIYGL 70

Query: 317 N--MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL--PVRLAEFGSVYRNE 372
              +   + A+           + +     V +  +  +   +L  P    +   V+R E
Sbjct: 71  EPILPPNRQAEKDKSGDTGSEARALKFDQTVPLAAYIARHLNDLTFPFARYQMDVVFRGE 130

Query: 373 PSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
            +       R R F Q D  V   ++       ++  +I  I++       +++++ R  
Sbjct: 131 RAKD----GRFRQFRQCDIDVVGREKLSLLYDAQMPAIITEIFEAVNIGDFVIRINNRKV 186

Query: 433 KRVGSDALWDDAENIMKG---VLDTIKNSSQDRINTGVLLG-------EGAFYGPKFEYI 482
              G     + +E  +K    ++D ++   + ++   +          +      K +  
Sbjct: 187 L-TGFFQSLNISETQIKSCISIIDNLEKIGEAKVKLELEKEGINPEQTQKIIDFVKIDGS 245

Query: 483 LKDAIGR---------------------DWQCGTIQVDFNLPSRFNAFYVNSHSEK---- 517
           + D + +                     +     ++       RF      +        
Sbjct: 246 VDDVLDKLKHLSQTLPESEQFNLGVSELETVITGVRNLGVPDKRFCIDLAIARGLNYYTG 305

Query: 518 --------CHPVMIHRAVFGSIERFIGIMIENFKGNLPLW-------------------- 549
                    H  +      G  E  +G  I      + +                     
Sbjct: 306 TVYETTLIGHEALGSICSGGRYEELVGTFIGEKMPGVGISIGLTRLISRLLKAGILNTLP 365

Query: 550 LSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIIC 609
            +P Q +V  +    +    +++  L+   L++ T+F    +  + +    + I   +I 
Sbjct: 366 PTPAQVVVVNMQDELMPTYLKVSQQLRQAGLNVITNFEKRQLGKQFQAADKQGIRFCVII 425

Query: 610 GDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           G  EA+ +   ++   S    +V+L D    + +
Sbjct: 426 GADEAAAQKSSLKDLQSGEQVEVALADLAEEIKR 459


>gi|327483364|gb|AEA77771.1| Alanyl-tRNA synthetase [Vibrio cholerae LMA3894-4]
          Length = 860

 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 59/143 (41%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFS 115
             ++ I  E  R+   + HS  H++  A++ +  E     G ++  +   +DF   +  +
Sbjct: 545 DQVDAIVDEKRRAAISLNHSATHLLHAALRKVLGEHVAQKGSLVRAETLRFDFSHLEAMT 604

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
             E+ ++E+ + + I  +       ++ ++A+          K          + V +  
Sbjct: 605 PAEIKEVERLVNQEIRHNHNIETNIMNIDEAKAKGAMALFGEKY--------DDQVRVLS 656

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G++  +LC G H  +TG +  F
Sbjct: 657 MGDFSTELCGGIHASNTGDIGLF 679


>gi|297580680|ref|ZP_06942606.1| alanyl-tRNA synthetase [Vibrio cholerae RC385]
 gi|297535096|gb|EFH73931.1| alanyl-tRNA synthetase [Vibrio cholerae RC385]
          Length = 860

 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 59/143 (41%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFS 115
             ++ I  E  R+   + HS  H++  A++ +  E     G ++  +   +DF   +  +
Sbjct: 545 DQVDAIVDEKRRAAISLNHSATHLLHAALRKVLGEHVAQKGSLVRAETLRFDFSHLEAMT 604

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
             E+ ++E+ + + I  +       ++ ++A+          K          + V +  
Sbjct: 605 PAEIKEVERLVNQEIRHNHNIETNIMNIDEAKAKGAMALFGEKY--------DDQVRVLS 656

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G++  +LC G H  +TG +  F
Sbjct: 657 MGDFSTELCGGIHASNTGDIGLF 679


>gi|262189584|ref|ZP_06047986.1| alanyl-tRNA synthetase [Vibrio cholerae CT 5369-93]
 gi|262034534|gb|EEY52872.1| alanyl-tRNA synthetase [Vibrio cholerae CT 5369-93]
          Length = 781

 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 59/143 (41%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFS 115
             ++ I  E  R+   + HS  H++  A++ +  E     G ++  +   +DF   +  +
Sbjct: 453 DQVDAIVDEKRRAAISLNHSATHLLHAALRKVLGEHVAQKGSLVRAETLRFDFSHLEAMT 512

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
             E+ ++E+ + + I  +       ++ ++A+          K          + V +  
Sbjct: 513 PAEIKEVERLVNQEIRHNHNIETNIMNIDEAKAKGAMALFGEKY--------DDQVRVLS 564

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G++  +LC G H  +TG +  F
Sbjct: 565 MGDFSTELCGGIHASNTGDIGLF 587


>gi|229525206|ref|ZP_04414611.1| alanyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
 gi|229338787|gb|EEO03804.1| alanyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
          Length = 860

 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 59/143 (41%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFS 115
             ++ I  E  R+   + HS  H++  A++ +  E     G ++  +   +DF   +  +
Sbjct: 545 DQVDAIVDEKRRAAISLNHSATHLLHAALRKVLGEHVAQKGSLVRAETLRFDFSHLEAMT 604

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
             E+ ++E+ + + I  +       ++ ++A+          K          + V +  
Sbjct: 605 PAEIKEVERLVNQEIRHNHNIETNIMNIDEAKAKGAMALFGEKY--------DDQVRVLS 656

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G++  +LC G H  +TG +  F
Sbjct: 657 MGDFSTELCGGIHASNTGDIGLF 679


>gi|153826924|ref|ZP_01979591.1| alanyl-tRNA synthetase [Vibrio cholerae MZO-2]
 gi|254291229|ref|ZP_04962025.1| alanyl-tRNA synthetase [Vibrio cholerae AM-19226]
 gi|149739227|gb|EDM53495.1| alanyl-tRNA synthetase [Vibrio cholerae MZO-2]
 gi|150422923|gb|EDN14874.1| alanyl-tRNA synthetase [Vibrio cholerae AM-19226]
          Length = 860

 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 59/143 (41%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFS 115
             ++ I  E  R+   + HS  H++  A++ +  E     G ++  +   +DF   +  +
Sbjct: 545 DQVDAIVDEKRRAAISLNHSATHLLHAALRKVLGEHVAQKGSLVRAETLRFDFSHLEAMT 604

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
             E+ ++E+ + + I  +       ++ ++A+          K          + V +  
Sbjct: 605 PAEIKEVERLVNQEIRHNHNIETNIMNIDEAKAKGAMALFGEKY--------DDQVRVLS 656

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G++  +LC G H  +TG +  F
Sbjct: 657 MGDFSTELCGGIHASNTGDIGLF 679


>gi|153802555|ref|ZP_01957141.1| alanyl-tRNA synthetase [Vibrio cholerae MZO-3]
 gi|124121918|gb|EAY40661.1| alanyl-tRNA synthetase [Vibrio cholerae MZO-3]
          Length = 860

 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 59/143 (41%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFS 115
             ++ I  E  R+   + HS  H++  A++ +  E     G ++  +   +DF   +  +
Sbjct: 545 DQVDAIVDEKRRAAISLNHSATHLLHAALRKVLGEHVAQKGSLVRAETLRFDFSHLEAMT 604

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
             E+ ++E+ + + I  +       ++ ++A+          K          + V +  
Sbjct: 605 PAEIKEVERLVNQEIRHNHNIETNIMNIDEAKAKGAMALFGEKY--------DDQVRVLS 656

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G++  +LC G H  +TG +  F
Sbjct: 657 MGDFSTELCGGIHASNTGDIGLF 679


>gi|153217607|ref|ZP_01951288.1| alanyl-tRNA synthetase [Vibrio cholerae 1587]
 gi|124113445|gb|EAY32265.1| alanyl-tRNA synthetase [Vibrio cholerae 1587]
          Length = 593

 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 59/143 (41%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFS 115
             ++ I  E  R+   + HS  H++  A++ +  E     G ++  +   +DF   +  +
Sbjct: 278 DQVDAIVDEKRRAAISLNHSATHLLHAALRKVLGEHVAQKGSLVRAETLRFDFSHLEAMT 337

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
             E+ ++E+ + + I  +       ++ ++A+          K          + V +  
Sbjct: 338 PAEIKEVERLVNQEIRHNHNIETNIMNIDEAKAKGAMALFGEKY--------DDQVRVLS 389

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G++  +LC G H  +TG +  F
Sbjct: 390 MGDFSTELCGGIHASNTGDIGLF 412


>gi|152967313|ref|YP_001363097.1| glycyl-tRNA synthetase [Kineococcus radiotolerans SRS30216]
 gi|151361830|gb|ABS04833.1| glycyl-tRNA synthetase [Kineococcus radiotolerans SRS30216]
          Length = 462

 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 52/327 (15%), Positives = 108/327 (33%), Gaps = 37/327 (11%)

Query: 328 IKDLRTFALKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
             +     L+P    G    F +    + ++ P  + + G  +RNE +   + + R R F
Sbjct: 153 DNEEGLHYLRPETAQGIFVNFANVMGSARKKPPFGIGQIGKSFRNEITPG-NFIFRTREF 211

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
            Q +   F              +  +S Y   G +   ++    P+         +   +
Sbjct: 212 EQMEMEFFVEPGTDEQWHQYWLDERMSWYTGLGIDAGNLRFFEHPQ---------EKLSH 262

Query: 447 IMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAI----------GRDWQCGTI 496
             K  +D            G L G             +++           G  W    I
Sbjct: 263 YSKRTVDIEYRFGFQGSEWGELEGIANRTDYDLSTHSRESGVDLSYFDQTKGERWIPYVI 322

Query: 497 QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI 556
           +    L     AF V++++E   P        G +++   + +++        L+P++A 
Sbjct: 323 EPAAGLTRSLMAFLVDAYTEDEAP-----NTKGGVDKRTVLRLDHR-------LAPVKAA 370

Query: 557 VTTIT--SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
           V  ++        A+++A  L+  + ++E D     I  + R H     P  I       
Sbjct: 371 VFPLSRNEQLSPKARDLAAELR-RNWNVEFDDAGA-IGRRYRRHDEVGTPYCITVDFDTL 428

Query: 615 SERSIGIRRFGSTTTQKVSLLDAIPIL 641
            + ++ IR   +   ++V L      L
Sbjct: 429 EDEAVTIRERDTMAQERVGLTQVTSWL 455


>gi|298208642|ref|YP_003716821.1| histidyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
 gi|83848565|gb|EAP86434.1| histidyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
          Length = 456

 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 60/456 (13%), Positives = 137/456 (30%), Gaps = 90/456 (19%)

Query: 270 RKGWKIFQTLI----SYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV---- 321
            KG + F  +     +Y+   IK  ++      +        +     Y      +    
Sbjct: 8   PKGTRDFSPIEVSKRNYIVDTIKSKFQNFGFQPIETPSFENSATLMGKYGDEGDRLIFKI 67

Query: 322 --------KCADDTIKDLRTFALKP--------MNCPGHVAVFNHGLKSYRELPVRLAEF 365
                   K  D T  +  +  + P         +     A +    ++  + P +  + 
Sbjct: 68  LNSGDFLKKVDDTTYAEKDSLVMTPKISEKALRYDLTVPFARYVVQHQNEIDFPFKRYQI 127

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
             V+R +         R R F Q DA V  +K     + +    L  S++     +   +
Sbjct: 128 QPVWRADRPQK----GRFREFYQCDADVVGSK--SLFQEVDFIQLYDSVFTALNLDGTTI 181

Query: 426 KLSTRPEKRVGSDALWDDAENI-MKGVLDTIKNSSQDRINTGVLLGEGAF---------- 474
           K++ R      ++ +    + I     LD +    ++ +   +L    +           
Sbjct: 182 KMNNRKVLSGFAEVIGASDKLIDFTVALDKLDKIGEENVKEEMLTKGISEEAISKIQPIF 241

Query: 475 -----YGPKFE----YILKDAIGRDW----------------QCGTIQVDFNLPSRFNAF 509
                +  K E     +    IG +                 Q  T+ +D  L    N +
Sbjct: 242 NVSGSFSDKIETVKSILESSEIGMEGIKELEFIQEAISQLPLQTATLDLDITLARGLN-Y 300

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERF-----------------------IGIMIENFKGNL 546
           Y  +  E   P  +     G   R+                       I +++E      
Sbjct: 301 YTGAIFEVSAPEGVSMGSIGGGGRYDDLTGIFGLKDMSGVGISFGLDRIYLVLEELNKFP 360

Query: 547 PLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPII 606
                  + +      +   YA +    L+++ +S E     + +  +    + + IP +
Sbjct: 361 DTVSENTKVLFVNFGETEALYAMQAIKKLRANGVSAELYPDKKKMGKQFDYANKRNIPFV 420

Query: 607 IICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           ++ G+ E +   + ++   +   + VSL   I  ++
Sbjct: 421 VVAGETEIANDLLALKSMKTGEQEDVSLQTLITKMS 456


>gi|323466686|gb|ADX70373.1| Histidyl-tRNA synthetase [Lactobacillus helveticus H10]
          Length = 416

 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 67/424 (15%), Positives = 130/424 (30%), Gaps = 73/424 (17%)

Query: 276 FQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           +Q +    R      +Y EI TP       ++         + +   +  D   K  R  
Sbjct: 8   WQKVEETARNFFNRANYREIRTP---SFENYEIFSRSSGDSSEIVEKQMYDFNDKGGRHI 64

Query: 335 ALKPMNCPGHVAVF--NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
           AL+P    G V  +  +         P  +    S +R E   +     R R F Q    
Sbjct: 65  ALRPEGTAGVVRAYVEDKMYAPEVVKPFNVFYMESTFRYERPQA----GRQREFHQIGVE 120

Query: 393 VFCTKEQMFNECLKIHNL----------IISIYKDFGFEKIMVKLSTRPEKRVG--SDAL 440
            F +   + +    +                     G E++                D L
Sbjct: 121 SFGSSNPLADVQTIMMGHDLLGELGVKNYQLHINTLGDEQVRKGYHDALVNYFTPVKDEL 180

Query: 441 WDDAENIMKG----VLDT------------------------------IKNSSQDRINTG 466
            +D++  ++     +LD+                              +K   Q  I+  
Sbjct: 181 SEDSQRRLRDNPLRILDSKDDRDKKFLPDAPKIRDFLNDNSKANFESILKMLDQLGIDYV 240

Query: 467 VLL----GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
           +      G   + G  FE++++D    +     +        R++      +  +   V 
Sbjct: 241 IDDDLVRGLDYYTGVIFEFMVEDKSLWESATTILGGG-----RYDHLVEEFNGPETPAV- 294

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSI 582
                FG  E  + +++E     L      I   +T I     + A EIA  L+      
Sbjct: 295 ----GFGIGEERLMLVLEKQNPEL-FKNEGIDFFITNIGEGTAQKAIEIARSLRKQGFEA 349

Query: 583 ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA--IPI 640
           + D   + +  + ++   +    +I  G+KE +   + I+R     T  +SL D   +  
Sbjct: 350 DFDVNQKKLKGQFKKADREGAKYVITLGEKELANGVLNIKRLADGKTIDLSLEDINDMNK 409

Query: 641 LTKE 644
           + KE
Sbjct: 410 VMKE 413


>gi|317967929|ref|ZP_07969319.1| seryl-tRNA synthetase [Synechococcus sp. CB0205]
          Length = 426

 Score = 69.8 bits (169), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/235 (15%), Positives = 78/235 (33%), Gaps = 21/235 (8%)

Query: 220 IYGTAWNTQQELTQYLYFLEESE-KRDHRKLAREMDLFHIAED----GSGVIFWHRKGWK 274
             G   N   E+  +     + +   +H ++A  + LF          S  +     G +
Sbjct: 117 PDGKDENDNVEIKTWGSPRAKEDWLEEHWQIAERLGLFETERSVRIAQSRFVTLMGLGAR 176

Query: 275 IFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           + ++LI++M        Y E+  P +++      SG    +    F     D        
Sbjct: 177 LERSLINFMLDLHGGKGYREVLPPILVNSASLTGSGQLPKFAEESFRCAEDD-------- 228

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDD 390
             L P       ++    +    +LP++   +   +R E         GL+R+  F + +
Sbjct: 229 LWLTPTAEVPVTSLHRGEVIPADQLPLKYVAYTPCFRREAGSYGRDTRGLIRLHQFNKVE 288

Query: 391 AHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE----KRVGSDALW 441
            + FC  E   +   +I     ++ +        ++L T        R     +W
Sbjct: 289 LYWFCHPEHSADAHQQITADAEAVLEALELPYRKIELCTGDMGFSATRTYDLEVW 343


>gi|301066873|ref|YP_003788896.1| seryl-tRNA synthetase [Lactobacillus casei str. Zhang]
 gi|300439280|gb|ADK19046.1| Seryl-tRNA synthetase [Lactobacillus casei str. Zhang]
          Length = 427

 Score = 69.8 bits (169), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 70/188 (37%), Gaps = 14/188 (7%)

Query: 272 GWKIFQTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G ++ + + ++ +    K+ YEEI  P +++      +G +  +    + +        D
Sbjct: 170 GARLERAVYNFFLDEHQKEGYEEIIPPYLVNNDSMFGTGQFPKFTDATYTIT------ND 223

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFT 387
                L P      V  + + +    +LPV        +R+E   +     GL+R+  F 
Sbjct: 224 GEPLTLIPTAEVPLVNYYRNDIIDAEKLPVNFTALTPAFRSEAGSAGRDTRGLIRMHQFN 283

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +   FC  E  + +   + +    + +  G    ++ L++              +W  
Sbjct: 284 KVEMVKFCKPEDSWKQLQNLIHDAEDLLQKLGLPYHVITLASNDASFTSAKTNDLEVWMP 343

Query: 444 AENIMKGV 451
           A++  + +
Sbjct: 344 AQDRYREI 351


>gi|148553432|ref|YP_001261014.1| alanyl-tRNA synthetase [Sphingomonas wittichii RW1]
 gi|205830213|sp|A5V3L0|SYA_SPHWW RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|148498622|gb|ABQ66876.1| alanyl-tRNA synthetase [Sphingomonas wittichii RW1]
          Length = 887

 Score = 69.8 bits (169), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/206 (19%), Positives = 76/206 (36%), Gaps = 17/206 (8%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIE 60
           M    ++T  DG            D A+ + R  A +       G V   S    +  + 
Sbjct: 504 MGDAGRITGDDGLEIAVE------DTAKPLGRVHAHR-------GTVVSGSVRTGDA-LH 549

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDEL 119
           ++   D R+     HS  H++  A+++         G  +  D F +DF   +  + +++
Sbjct: 550 LVVDGDRRTRIRANHSATHLLHAALRNRLGSHVTQKGSLVAADRFRFDFSHPKALTPEDI 609

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARE--LFESKKEAYKVEILESIPAKENVTLYRQG 177
           A IE ++   I  +     + ++ + A E        E Y  E+      K    L  + 
Sbjct: 610 AAIEAEVNRHIRENDEVTTRLMTPDAAIEAGAMALFGEKYGDEVRVLSMGKAGRDLGAKS 669

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKV 203
              +LC G HV + G +  F  + + 
Sbjct: 670 YSVELCGGTHVSALGDIALFKIISES 695


>gi|307719261|ref|YP_003874793.1| histidyl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
 gi|306532986|gb|ADN02520.1| histidyl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
          Length = 437

 Score = 69.8 bits (169), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/222 (15%), Positives = 78/222 (35%), Gaps = 16/222 (7%)

Query: 430 RPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGR 489
           R E+ VG+D         +  V+  +  +    I+  +  G   + G  FE  L D    
Sbjct: 228 RMEEGVGADNPHLARLKEIWAVIGELGLAGFFTIDPSITRGLDYYTGVVFETFLSDLPDI 287

Query: 490 DWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW 549
              C           R++       ++    V     +    +R +  M E         
Sbjct: 288 GSVCSG--------GRYDNLVGLYSTQSMSGVGASIGL----DRLMAAMQELGMLEAIPT 335

Query: 550 LSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIIC 609
           ++P   +V  +    + +   +A  L++  +  E   +   +  +      K IP  +I 
Sbjct: 336 MAPE-VLVVCMEERFLAHYHGVAAALRARGVRTEVYPQARKLGQQFSYAEKKGIPFALIM 394

Query: 610 GDKEASERSIGIRRFGSTTTQKV-SLLDAIPIL--TKESLPP 648
           G+ E +  ++ ++   + T + V  L + +  +   +E + P
Sbjct: 395 GEDEIAAGTMALKDLVARTQRVVQGLEEVVDAVEYRREGVHP 436


>gi|152973866|ref|YP_001373383.1| seryl-tRNA synthetase [Bacillus cereus subsp. cytotoxis NVH 391-98]
 gi|189083557|sp|A7GJT0|SYS_BACCN RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|152022618|gb|ABS20388.1| seryl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98]
          Length = 424

 Score = 69.4 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/223 (17%), Positives = 85/223 (38%), Gaps = 21/223 (9%)

Query: 242 EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEIN 295
           E + H  LA ++ +          GS  +F+   G ++ + LIS+M     +   YEE+ 
Sbjct: 136 EPKPHWDLATDLGIVDFERAGKVTGSRFVFYKGAGARLERALISFMLDLHTEEHGYEEVL 195

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
            P ++++     +G    +  + F +        +   + L P        +    + S 
Sbjct: 196 PPYMVNRASMTGTGQLPKFEEDAFLI--------ESEDYFLIPTAEVPVTNMHRDEILSA 247

Query: 356 RELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
            +LP+R A F S +R+E   +     GL+R   F + +   F   E+ + E  K+ N   
Sbjct: 248 EQLPIRYAAFSSCFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEESYEELEKLTNDAE 307

Query: 413 SIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENIMKGV 451
            + +       ++ + T              +W  + +  + +
Sbjct: 308 RVLQLLELPYRVMSMCTGDLGFTAAKKYDIEVWLPSYDTYREI 350


>gi|86160202|ref|YP_466987.1| alanyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|123496877|sp|Q2IG40|SYA_ANADE RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|85776713|gb|ABC83550.1| alanyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 905

 Score = 69.4 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/142 (24%), Positives = 63/142 (44%), Gaps = 9/142 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFS 115
            ++E+   +  R L    HS  H++  A++ +  E     G ++  D   +DF   QP +
Sbjct: 577 DAVELSVDDRRRDLVRANHSATHLLQLALREVLGEHVKQAGSVVAPDYLRFDFSHFQPVT 636

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            +ELA +E+++ E++  ++      L  E+AR          K          + V + R
Sbjct: 637 EEELAAVERRVNELVRENAETETAVLKLEEARHAGAMMIFGEKY--------GDVVRVVR 688

Query: 176 QGEWFDLCRGPHVRSTGQVKKF 197
            G   +LC G HVR +G +  F
Sbjct: 689 IGPSKELCGGTHVRRSGDIAFF 710


>gi|325661656|ref|ZP_08150280.1| alanyl-tRNA synthetase 1 [Lachnospiraceae bacterium 4_1_37FAA]
 gi|325472183|gb|EGC75397.1| alanyl-tRNA synthetase 1 [Lachnospiraceae bacterium 4_1_37FAA]
          Length = 879

 Score = 69.4 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 66/150 (44%), Gaps = 10/150 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFS 115
            ++ +      R      HS  H++ +A++++        G  +  D   +DF      +
Sbjct: 548 DTVTLEVRSKERLNTCKNHSATHLLQKALKTVLGSHVEQKGSLVTPDRLRFDFAHFSAMT 607

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            +E+  +E  + E IA+++P + + ++ E+A++         K E        E+V +  
Sbjct: 608 KEEIEAVEALVNEEIAKNNPVVTEVMNVEEAKKTGAMALFGEKYE--------EDVRVVT 659

Query: 176 QGEW-FDLCRGPHVRSTGQVKKFFKLMKVA 204
            G++  +LC G HV +TG +  F  + +  
Sbjct: 660 MGDFSKELCGGTHVSNTGLITTFKIVSESG 689


>gi|307719119|ref|YP_003874651.1| glycyl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
 gi|306532844|gb|ADN02378.1| glycyl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
          Length = 443

 Score = 69.4 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 58/432 (13%), Positives = 127/432 (29%), Gaps = 79/432 (18%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKI---KDDYEEINTPQVLDQHLWQQSGHWDSYRA--- 316
           S    +   G ++   +  +   ++   + +   ++   ++   +W+ SGH +++     
Sbjct: 30  SSAWDYGPLGVELKNNIERFWWNEMVRKRRNIVGLDAAILMHPKVWEASGHVENFHDPLV 89

Query: 317 -----------------------------------NMFAVKCADDTIKDLRTFALKPMNC 341
                                              N+           +     L+P   
Sbjct: 90  DCKECKARFRADQIDLSAPCPECGAKDSFTEPRQFNLMFKTHLGPVEDESTVVYLRPETA 149

Query: 342 PGHVAVFNHGLKSYR-ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
            G    + + L+S R ++P  +A+ G  +RNE   + + + R   F Q +   F    + 
Sbjct: 150 QGIYVNYKNCLQSSRLKVPFGIAQVGKAFRNEIV-TKNFIFRTCEFEQMEMQFFVHPSED 208

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQ 460
                      +  Y+  G     ++         G D L   A    K  +D      Q
Sbjct: 209 KKWFDYWKAERMEYYRKMGVRPEKLRFHQH-----GPDELAHYA----KEAVDI-----Q 254

Query: 461 DRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGT---IQVDFNLPSRFNAFYVNSHSEK 517
                G    EG      ++      + R  Q         D     R+  + + + +  
Sbjct: 255 YEFPFGWRELEGVHNRTDYD------LSRHSQFSGKDLSYFDDETRERYIPYIIETSAGL 308

Query: 518 CHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIV------TTITSSAVEYAQEI 571
              V++  +     E      +EN +    L   P+ A +               YAQ +
Sbjct: 309 TRSVLMVLSDAYDEEE-----LENGEKRTVLRFHPLIAPITVAVFPLMRRDGLDTYAQNL 363

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
              L+ H  +   D     I  + R       P  I    +   + ++ +R   S    +
Sbjct: 364 EEELRDH-FNTFYDESGA-IGRRYRRQDEVGTPYCITVDYQTLKDDTVTLRYRDSMEQVR 421

Query: 632 VSLLDAIPILTK 643
           +   + +  + +
Sbjct: 422 IHRNEIVSAVQQ 433


>gi|311028946|ref|ZP_07707036.1| seryl-tRNA synthetase [Bacillus sp. m3-13]
          Length = 425

 Score = 69.4 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 43/324 (13%), Positives = 107/324 (33%), Gaps = 33/324 (10%)

Query: 137 LKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKK 196
            +  +S + A    E +   + ++ +  +  K         E+ D  RG        +  
Sbjct: 51  KRNEVSQQIAVMKREKQDADHLIKEMREVGDKVK-------EFDDELRGVEEALELLLLS 103

Query: 197 FFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLF 256
              +   +      + +   + + +G       E   +    +E    D  +  +     
Sbjct: 104 IPNIPHESVPVGETEDDNVEVRK-WGEVPTFGFEAKAHWDIADELGVIDFERAGKVTG-- 160

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSY 314
                 S  +F+   G ++ + L ++M     D   Y E+  P ++++     +G    +
Sbjct: 161 ------SRFVFYRGLGARLERALFNFMLDLHVDEHGYTEVLPPYLVNRASMTGTGQLPKF 214

Query: 315 RANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
             + F +        +   + L P        +    + S  +LP+  A F + +R+E  
Sbjct: 215 EEDAFLI--------EKEDYFLVPTAEVPITNMHRDEILSGDQLPINYAAFSACFRSEAG 266

Query: 375 GS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP 431
            +     GL+R   F + +   F   E+ + E  K+      + +  G    ++ + T  
Sbjct: 267 SAGRDTRGLIRQHQFNKVELVKFVKPEESYEELEKLTGNAEKVLQLLGLPYRVLSMCTAD 326

Query: 432 EKRV----GSDALWDDAENIMKGV 451
                       +W  ++   + +
Sbjct: 327 LGFTAAKKYDIEVWIPSQETYREI 350


>gi|239629757|ref|ZP_04672788.1| seryl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|239527369|gb|EEQ66370.1| seryl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           8700:2]
          Length = 427

 Score = 69.4 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 70/188 (37%), Gaps = 14/188 (7%)

Query: 272 GWKIFQTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G ++ + + ++ +    K+ YEEI  P +++      +G +  +    + +        D
Sbjct: 170 GARLERAVYNFFLDEHQKEGYEEIIPPYLVNNDSMFGTGQFPKFTDATYTIT------ND 223

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFT 387
                L P      V  + + +    +LPV        +R+E   +     GL+R+  F 
Sbjct: 224 GEPLTLIPTAEVPLVNYYRNDIIDAEKLPVNFTALTPAFRSEAGSAGRDTRGLIRMHQFN 283

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +   FC  E  + +   + +    + +  G    ++ L++              +W  
Sbjct: 284 KVEMVKFCKPEDSWKQLQNLIHDAEDLLQKLGLPYHVITLASNDASFTSAKTNDLEVWMP 343

Query: 444 AENIMKGV 451
           A++  + +
Sbjct: 344 AQDRYREI 351


>gi|116495303|ref|YP_807037.1| seryl-tRNA synthetase [Lactobacillus casei ATCC 334]
 gi|227534260|ref|ZP_03964309.1| seryl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
 gi|122263281|sp|Q037M7|SYS_LACC3 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|116105453|gb|ABJ70595.1| seryl-tRNA synthetase [Lactobacillus casei ATCC 334]
 gi|227188114|gb|EEI68181.1| seryl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
          Length = 427

 Score = 69.4 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 70/188 (37%), Gaps = 14/188 (7%)

Query: 272 GWKIFQTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G ++ + + ++ +    K+ YEEI  P +++      +G +  +    + +        D
Sbjct: 170 GARLERAVYNFFLDEHQKEGYEEIIPPYLVNNDSMFGTGQFPKFTDATYTIT------ND 223

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFT 387
                L P      V  + + +    +LPV        +R+E   +     GL+R+  F 
Sbjct: 224 GEPLTLIPTAEVPLVNYYRNDIIDAEKLPVNFTALTPAFRSEAGSAGRDTRGLIRMHQFN 283

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +   FC  E  + +   + +    + +  G    ++ L++              +W  
Sbjct: 284 KVEMVKFCKPEDSWKQLQNLIHDAEDLLQKLGLPYHVITLASNDASFTSAKTNDLEVWMP 343

Query: 444 AENIMKGV 451
           A++  + +
Sbjct: 344 AQDRYREI 351


>gi|193214281|ref|YP_001995480.1| seryl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110]
 gi|238692702|sp|B3QV79|SYS_CHLT3 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|193087758|gb|ACF13033.1| seryl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110]
          Length = 427

 Score = 69.4 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/229 (14%), Positives = 77/229 (33%), Gaps = 21/229 (9%)

Query: 236 YFLEESEKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRRKIKD-- 289
               + + +DH +L + + +          G+G   +  KG  + + LI++M     +  
Sbjct: 134 KREFDFKPKDHIELGKSLGMLDFERGAKIAGAGFPLYIGKGASLERALINFMLDLHLEKH 193

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
            Y+E+  P  +++   + +G W  +   ++ +   D            P        +  
Sbjct: 194 GYKEVFPPFFVNRDSLRGTGQWPKFADQVYYMNDDD--------IYAIPTAEVPVTNMHR 245

Query: 350 HGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
             +   +ELP++ A + + +R E         G +RV  F + +   F   E  ++E   
Sbjct: 246 DEMLQSKELPIKYAAYSACFRREAGSYGKDTKGFLRVHQFNKVEMVKFVLPETSYDELEA 305

Query: 407 IHNLIISIYKDFGFEKI----MVKLSTRPEKRVGSDALWDDAENIMKGV 451
           +      + K                +    +     +W  AE      
Sbjct: 306 LLGDAEDVLKALEIPYRVLLLCSGDISANAAKCYDIEVWSPAEEKFLEA 354


>gi|312865429|ref|ZP_07725656.1| serine--tRNA ligase [Streptococcus downei F0415]
 gi|311098947|gb|EFQ57164.1| serine--tRNA ligase [Streptococcus downei F0415]
          Length = 425

 Score = 69.4 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 83/222 (37%), Gaps = 20/222 (9%)

Query: 242 EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINT 296
           E + H  L  ++D+          GS  +F+   G ++ + + ++M     K+ Y E+  
Sbjct: 136 EAKAHWDLGEDLDILDWERGAKVTGSRFLFYKGLGARLERAIYNFMLDEHAKEGYTEVIP 195

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +++      +G +  ++ + F +  +D        + L P         +   +   +
Sbjct: 196 PYMVNHDSMFGTGQYPKFKEDTFELADSD--------YVLIPTAEVPLTNYYRGEILDGK 247

Query: 357 ELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           E+PV        +R+E   +     GL+R+  F + +   F   E  + E  K+     +
Sbjct: 248 EMPVYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPETSYEELEKMTANAEN 307

Query: 414 IYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
           I +       ++ L T              +W  A+N  + +
Sbjct: 308 ILQKLNLPYRVITLCTGDMGFSAAKTYDVEVWIPAQNTYREI 349


>gi|319407395|emb|CBI81046.1| Alanyl-tRNA synthetase [Bartonella sp. 1-1C]
          Length = 887

 Score = 69.4 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/164 (20%), Positives = 72/164 (43%), Gaps = 5/164 (3%)

Query: 45  GKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DG 103
           G+V      + +  +E+I   + R      HS  H++ EA++ I        G ++    
Sbjct: 535 GEVKSGRAKISDC-VELIVDSERRRKIRANHSATHLLHEALRCILGPHVAQKGSLVSPSR 593

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKAR--ELFESKKEAYKVEI 161
             +DF   +P SS+EL ++E    +I+ ++S  + + ++ + A          E Y  E+
Sbjct: 594 LRFDFSHPKPISSEELKRVEDLANDIVLQNSKVITRLMALDDAILGGAMALFGEKYGDEV 653

Query: 162 -LESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVA 204
            + S+  +      ++    +LC G HV+ TG +     + + +
Sbjct: 654 RVVSMGERCEPIELKKHWSIELCGGTHVQRTGDIGLIHIVAESS 697


>gi|21675063|ref|NP_663128.1| glycyl-tRNA synthetase [Chlorobium tepidum TLS]
 gi|59798593|sp|Q8KAB1|SYG_CHLTE RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|21648301|gb|AAM73470.1| glycyl-tRNA synthetase [Chlorobium tepidum TLS]
          Length = 470

 Score = 69.4 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 43/323 (13%), Positives = 97/323 (30%), Gaps = 50/323 (15%)

Query: 335 ALKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
            L+P    G    F++    S  ++P  +A+ G  +RNE     + + R+  F Q +   
Sbjct: 179 YLRPETAQGIFVNFHNVREASRMKVPFGIAQIGKAFRNEIVKG-NFIFRMVEFEQMEMQY 237

Query: 394 FCTKEQMFNECLKIHNLIISIY-KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
           F                    Y +  G  K  +      +    +D  +D          
Sbjct: 238 FVKPGTQLEAFEAWREERFRWYSETLGMSKEKLHWYKHDKLAHYADLAYDI--------- 288

Query: 453 DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
                  +     G+   EG      F+               +        +   +   
Sbjct: 289 -------KFEFPFGIEEIEGIHSRTDFD---------------LSQHQKYSGKSMEYIDQ 326

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIENFK-----------GNLPLWLSPIQAIVTTIT 561
           + +E+  P ++  +  G    F+ ++ + ++             L   ++P++A V  + 
Sbjct: 327 TTNERYIPYVVETSS-GCDRTFLALLSDAYQEDVVDGEPRVMLKLAPKVAPVKAAVLPLM 385

Query: 562 SSAV--EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSI 619
                 E A ++   L      ++ D    +I  + R       P             +I
Sbjct: 386 KKGEMGEKAAQLCRDLSES-FMVQYDDAA-SIGKRYRRQDEIGTPFCFTVDHDTLENGTI 443

Query: 620 GIRRFGSTTTQKVSLLDAIPILT 642
            +R   +   +++++  A   L 
Sbjct: 444 TVRYRDTAAQERINMSKAAEFLA 466


>gi|321312284|ref|YP_004204571.1| histidyl-tRNA synthetase [Bacillus subtilis BSn5]
 gi|291485165|dbj|BAI86240.1| histidyl-tRNA synthetase [Bacillus subtilis subsp. natto BEST195]
 gi|320018558|gb|ADV93544.1| histidyl-tRNA synthetase [Bacillus subtilis BSn5]
          Length = 424

 Score = 69.4 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 69/411 (16%), Positives = 138/411 (33%), Gaps = 55/411 (13%)

Query: 276 FQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           +Q +   MR   +   Y+EI TP        +          ++   +      +  R+ 
Sbjct: 20  WQYVEQIMRDTCRTYQYKEIRTPIF---EHTELFARGVGESTDIVQKEMYTFEDRKGRSL 76

Query: 335 ALKPMNCPGHVAVFNHGLKSYREL-PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
            L+P      V  FN        + P +L   G ++R E   +     R R F Q     
Sbjct: 77  TLRPEGTAAAVRAFNENKLFANPVQPTKLYYVGPMFRYERPQT----GRYRQFYQFGIEA 132

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKI---MVKLSTRPEKRVGSDALWDDAENIMKG 450
             +K+   +   ++  L +SIY+  G E +   +  L  +  ++   +AL    E  ++ 
Sbjct: 133 IGSKDPAIDA--EVMALAMSIYEKAGLENVKLVINSLGDQDSRKSYREALVKHFEPRIEE 190

Query: 451 ---------------VLDTIKNSSQD------RINTGVLLGEGAFY----------GPKF 479
                          +LD  K+   +       I T +     A++          G  +
Sbjct: 191 FCSDCQSRLHTNPLRILDCKKDRDHELMKSAPSILTYLNEESAAYFDKVKQYLNDLGISY 250

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK--------CHPVMIHRAVFGSI 531
           E       G D+   T     +    F A    +   +          P         SI
Sbjct: 251 EIDPNLVRGLDYYNHTAFEIMSNAEGFGAITTLAGGGRYDGLVEQIGGPEAPGIGFAMSI 310

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           ER +  +  + +         I   + T+   A +Y+  +   L+   +S E D+ N+ +
Sbjct: 311 ERLLAAI--DAEKRELPVDKGIDCYIVTLGEKAKDYSVSLVYKLREAGISSEIDYENKKM 368

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             + +         I I G+ E ++  I ++   +    +V+L + I ++ 
Sbjct: 369 KGQFKTADRLNARFIAILGEDELAQNKINVKDAQTGEQIEVALDEFIHVMK 419


>gi|256370704|ref|YP_003108529.1| glycyl-tRNA synthetase [Candidatus Sulcia muelleri SMDSEM]
 gi|256009496|gb|ACU52856.1| glycyl-tRNA synthetase [Candidatus Sulcia muelleri SMDSEM]
          Length = 499

 Score = 69.4 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 48/350 (13%), Positives = 113/350 (32%), Gaps = 31/350 (8%)

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +   + ++    ++ Y+ N+  +    +   + + +          +   N    S  ++
Sbjct: 165 LKKINFFETKNCFNFYKLNLMFIVYIKNIYNEKKIYLRPETAQGSILNFLNVKKTSKIKI 224

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYK 416
           P  +A+ G V+RNE + +   L R+R F Q +   F +   E  + +  K + L   +  
Sbjct: 225 PFGIAQIGKVFRNEIT-ARQFLFRLREFEQMEMQFFISPGEEGKWYDYWKEYRLKWHLSL 283

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI-NTGVLLGEGAFY 475
            F  +        +      S              L+ I + +   I N  +   +   Y
Sbjct: 284 GFKKKNYRFYNHDKLAHYSQSACDIQFKFPFGFKELEGIHSRTDFDIKNHEIFSKKKIRY 343

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
              F+     +        ++ +D    + F++       +     ++            
Sbjct: 344 ---FDIKKNLSYRPYIIETSLGLDRMFLAIFSSSLKEEILKNNTKRIV------------ 388

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSA--VEYAQEIANLLKSHHLSIETDFRNETINY 593
                     LP  L+PI+A +  +      +   ++I   LK            ++I  
Sbjct: 389 --------LKLPYILAPIKAAILPLVKDKQLIVIGKKIFKRLKL--DYSLIYDEKDSIGK 438

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           + R       P+ I        +  + IR   S   +++ +L+    + K
Sbjct: 439 RYRRQDAIGTPLCITIDYDSIKDNCVTIRFRDSMIQKRILILEIKKNIEK 488


>gi|227518153|ref|ZP_03948202.1| seryl-tRNA synthetase [Enterococcus faecalis TX0104]
 gi|257081307|ref|ZP_05575668.1| seryl-tRNA synthetase [Enterococcus faecalis E1Sol]
 gi|227074396|gb|EEI12359.1| seryl-tRNA synthetase [Enterococcus faecalis TX0104]
 gi|256989337|gb|EEU76639.1| seryl-tRNA synthetase [Enterococcus faecalis E1Sol]
          Length = 423

 Score = 69.4 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 74/190 (38%), Gaps = 17/190 (8%)

Query: 271 KGWKIFQTLISYMRRK--IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTI 328
            G ++ + L ++M      +  Y E+ TP +++      +G +  ++ ++F ++  D T+
Sbjct: 169 LGARLERALYNFMLDLHVYEHGYTEMITPYIVNDTAMFGTGQFPKFKEDVFQLQDTDLTL 228

Query: 329 KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRG 385
                    P         +N+ +   ++LP+        +R+E   +     GL+R+  
Sbjct: 229 I--------PTAEVPLTNYYNNEILDGKDLPIYFTALSPSFRSEAGSAGRDTRGLIRLHQ 280

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALW 441
           F + +   F   E  + E  K+ N    I +  G    ++ LST              +W
Sbjct: 281 FNKVEMVKFSDAEHSYEELEKMTNNAEEILQKLGLPYRVMALSTGDMGFSAAKTYDLEVW 340

Query: 442 DDAENIMKGV 451
             A+   + +
Sbjct: 341 IPAQETYREI 350


>gi|154150976|ref|YP_001404594.1| seryl-tRNA synthetase [Candidatus Methanoregula boonei 6A8]
 gi|166222741|sp|A7I890|SYS_METB6 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|153999528|gb|ABS55951.1| seryl-tRNA synthetase [Methanoregula boonei 6A8]
          Length = 425

 Score = 69.4 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 44/223 (19%), Positives = 80/223 (35%), Gaps = 20/223 (8%)

Query: 242 EKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIFQ--TLISYMRRKI-KDDYEEINT 296
           E ++H +LA +     F  A   SG  F+  KG  +     L  +    + K  +  +  
Sbjct: 138 ELKNHGQLAADNGWADFERAAKTSGAGFYFLKGGLVMLDLALQRFALDLLGKKGFTPVIP 197

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P ++ +  ++     D +   M+ +        D     L   +     A++   +   +
Sbjct: 198 PFMIKRDSYEGVTDLDDFEKVMYKI--------DGDDTYLIATSEHPIAAMYQDEIFEEK 249

Query: 357 ELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           +LP+RL      +R E         GL RV  FT+ +  VFC  E  +    ++      
Sbjct: 250 DLPLRLCGLSPCFRREIGAHGLDTKGLFRVHQFTKIEQFVFCRPENSWQIHEELLANAEE 309

Query: 414 IYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENIMKGVL 452
           ++   G    +V + T     V         W   EN  K V+
Sbjct: 310 VFTKLGLPYHVVNICTGDIGTVAAKKYDIEAWMPRENAYKEVV 352


>gi|116490653|ref|YP_810197.1| histidyl-tRNA synthetase [Oenococcus oeni PSU-1]
 gi|290890067|ref|ZP_06553150.1| hypothetical protein AWRIB429_0540 [Oenococcus oeni AWRIB429]
 gi|116091378|gb|ABJ56532.1| histidyl-tRNA synthetase [Oenococcus oeni PSU-1]
 gi|290480258|gb|EFD88899.1| hypothetical protein AWRIB429_0540 [Oenococcus oeni AWRIB429]
          Length = 422

 Score = 69.4 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 68/429 (15%), Positives = 138/429 (32%), Gaps = 66/429 (15%)

Query: 262 GSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINT---------PQVLDQHLWQQSGHWD 312
            S  +F   KG       +  +  KI    +EI             +     ++      
Sbjct: 1   MSDKLFQKPKGTADLLPAVQAIWDKINRAAQEIFGRRYRFGRIDTPLF--ENYEIFARTS 58

Query: 313 SYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF--NHGLKSYRELPVRLAEFGSVYR 370
              +++ + +  D   K  R  AL+P    G V  +  N       E PV L    S++R
Sbjct: 59  GDSSDVVSKEMYDFYDKGNRHLALRPEGTAGVVRAYVENKLYGPEYEKPVNLYYLESMFR 118

Query: 371 NEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR 430
            E   +     R R F Q     F +     +   +I  + I  +++F  +  +VK+   
Sbjct: 119 YERPQA----GRTREFHQLGVESFGSDSPFLDA--QIIQMAIDFFQEFNLDNFIVKI--- 169

Query: 431 PEKRVGSDALWDDAENIMKGVLDTIK-----------NSSQDRINTGVLLGEGAF--YGP 477
               +G +    +  + +   L   +            S+  RI       +       P
Sbjct: 170 --NSLGDEESRTNYRSALVDYLKQFEDRLSNDSKNRLKSNPLRILDSKDPKDQELLIDAP 227

Query: 478 KF-EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN---------SHSEKCHPVMIHRAV 527
           K  +Y+ +++  R  +      DF++    +   V             E   P +   A 
Sbjct: 228 KILDYLNQESKDRFKKVTKALDDFDISYEIDNKLVRGLDYYNNTIFEIETRDPKLKSSAT 287

Query: 528 FGSIERFIGIMIENFKGNLPLWL--------------SPIQ----AIVTTITSSAVEYAQ 569
                R+ G++ E      P                    Q      +     S  E+A 
Sbjct: 288 VCGGGRYSGMVEEFGGPETPAIGFGIGLERLITLVGQIEDQDHNDVYIVQTDKSVNEFAN 347

Query: 570 EIANLLKSH-HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
            +A  L+   H  +  D+ + ++  +++     K    I+ G++E   + + I++    +
Sbjct: 348 LLAKRLREKFHFGVLLDYTDRSMKSQLKSADRTKSRYSIVIGEEEVKNKKVTIKKMADGS 407

Query: 629 TQKVSLLDA 637
            +K+ L   
Sbjct: 408 QKKILLDKL 416


>gi|318040473|ref|ZP_07972429.1| seryl-tRNA synthetase [Synechococcus sp. CB0101]
          Length = 424

 Score = 69.4 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 72/210 (34%), Gaps = 20/210 (9%)

Query: 244 RDHRKLAREMDLFH----IAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
            +H ++A  ++LF     +    S  +    +G ++ + LI++M        Y E+  P 
Sbjct: 142 EEHWQIAERLELFEAERSVRIAQSRFVTLLGQGARLERALINFMLDLHGGKGYREVLPPI 201

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +++      SG    +    F     D          L P       ++    +    +L
Sbjct: 202 LVNSASLTGSGQLPKFAEESFRCAEDD--------LWLTPTAEVPVTSLHRDEVIPAEQL 253

Query: 359 PVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           P++   +   +R E         GL+R+  F + + + FC  +       +I     ++ 
Sbjct: 254 PLKYVAYTPCFRREAGSYGRDTRGLIRLHQFNKVELYWFCHPDHSAEAHQQITADAEAVL 313

Query: 416 KDFGFEKIMVKLSTRPE----KRVGSDALW 441
           +        ++L T        R     +W
Sbjct: 314 EALELPYRKIELCTGDMGFSAARTYDLEVW 343


>gi|110004380|emb|CAK98718.1| probable glycyl-trna synthetase, protein [Spiroplasma citri]
          Length = 455

 Score = 69.4 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 53/392 (13%), Positives = 114/392 (29%), Gaps = 81/392 (20%)

Query: 269 HRK---GWKIFQTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD 325
           + K   G    + L +++  K       I  P        +       ++ N   ++   
Sbjct: 107 YPKLNCGGWSNEQLETFITEKN------ILCPNCGGHDFTEIRQFELMFKTNQGVIED-- 158

Query: 326 DTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVR 384
               +     L+P    G    F +  +S  +++P  + + G  +RNE +   + + R R
Sbjct: 159 ----EKSVVYLRPETAQGIFVNFKNVQRSLRKKIPFGVGQIGKSFRNEITPG-NFIFRTR 213

Query: 385 GFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
            F Q +                                         E    S+   +  
Sbjct: 214 EFEQME----------------------------------------LEFFYDSNEKVNWF 233

Query: 445 ENIMKGV---LDTIKNSSQDRINTGVLLGEGAFYG-------PKFEYILKDAIGRDWQCG 494
           E  +K V   L+ I   S++         E A Y         KF + + +  G   +  
Sbjct: 234 EYWVKEVTKFLELINLKSENYRFREHNADELAHYAKRTIDIEYKFPFGIGELWGIADRGD 293

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK----------- 543
                 +  S+ +  Y+N  + +     +     G     + I+ + +            
Sbjct: 294 YDLRRHSEMSKNDLSYLNQETNEKIMPHVIEPSVGVGRLMLAILYDAYHVEKVDENETRI 353

Query: 544 -GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
              L   L+P Q  V  ++        ++   L  H      D     I  + R      
Sbjct: 354 VLKLSPLLAPYQIAVIPLSKQLNSETYQLYEKLLVH-FQCTYDETGN-IGKRYRRQDAIG 411

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
            P  +        ++ + +R   +   ++V++
Sbjct: 412 TPFCVTVDFDTQEDQKVTVRNRDTMKQERVAI 443


>gi|312977238|ref|ZP_07788986.1| histidine--tRNA ligase [Lactobacillus crispatus CTV-05]
 gi|310895669|gb|EFQ44735.1| histidine--tRNA ligase [Lactobacillus crispatus CTV-05]
          Length = 428

 Score = 69.4 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 63/405 (15%), Positives = 123/405 (30%), Gaps = 51/405 (12%)

Query: 276 FQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           +Q +    R      +Y EI TP       ++         + +   +  D   K  R  
Sbjct: 20  WQKVEETARNFFNRANYREIRTP---SFENYEIFARSSGDSSEIVEKQMYDFDDKGGRHI 76

Query: 335 ALKPMNCPGHVAVF--NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
           AL+P    G V  +  +         P  +    S +R E   +     R R F Q    
Sbjct: 77  ALRPEGTAGVVRAYVEDKMYAPEVVKPFNVFYMESTFRYERPQA----GRQREFHQIGVE 132

Query: 393 VFCTKEQMFNECLKIHNL----------IISIYKDFGFEKIMVKLSTRPEKRVG--SDAL 440
            F +   + +    +                     G E++                D L
Sbjct: 133 SFGSSNPLSDVQTIMMGHDLLGELGVKNYQLHINTLGNEQVRQDYHDALVNYFTPLKDEL 192

Query: 441 WDDAENIMKG----VLDTIKNSSQD------RINTGVLLGEGAFYGP--------KFEYI 482
            +D++  ++     +LD+     +       +I   +     A +            +Y+
Sbjct: 193 SEDSQRRLRDNPLRILDSKDERDKKFLPKAPKIREFLDDDSKANFDAILKMLGQLGIDYV 252

Query: 483 LKDAI--GRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIH--------RAVFGSIE 532
           + D +  G D+  G I                      +  ++            FG  E
Sbjct: 253 IDDDLVRGLDYYTGIIFEFMVEDKSLWESATTILGGGRYDHLVEEFNGPATPAVGFGIGE 312

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
             + +++E     L      I   +T I     + A EIA  L++     + D   + + 
Sbjct: 313 ERLMLVLEKQNPAL-FEKRGIDFFITNIGDGTAQKAIEIARSLRNQGFEADFDVNQKKLK 371

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
            + ++   +    +I  G+KE +   + I+R     T  +SL D 
Sbjct: 372 NQFKKADREGAKYVITLGEKELANGVLNIKRLADGKTIDLSLEDL 416


>gi|289662681|ref|ZP_06484262.1| alanyl-tRNA synthetase [Xanthomonas campestris pv. vasculorum
           NCPPB702]
 gi|289669644|ref|ZP_06490719.1| alanyl-tRNA synthetase [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 882

 Score = 69.4 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/132 (24%), Positives = 57/132 (43%), Gaps = 10/132 (7%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDELAQIEKKM 126
           R   ++ HS  H++  A++ +        G  +  D   +DF   QP ++DELA IE+K+
Sbjct: 563 RGKTILNHSATHLLHAALREVLGTHVQQKGSLVAPDRLRFDFSHFQPITADELAVIERKV 622

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRG 185
              +  +       ++ ++A +         K          ENV + + G +  +LC G
Sbjct: 623 NAEVRTNHGVEVHNMAMQEALDFGAMALFGEKY--------GENVRVLKMGGYSTELCGG 674

Query: 186 PHVRSTGQVKKF 197
            HV  TG +  F
Sbjct: 675 THVTRTGDIGLF 686


>gi|257417382|ref|ZP_05594376.1| seryl-tRNA synthetase [Enterococcus faecalis AR01/DG]
 gi|257159210|gb|EEU89170.1| seryl-tRNA synthetase [Enterococcus faecalis ARO1/DG]
          Length = 423

 Score = 69.4 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 74/190 (38%), Gaps = 17/190 (8%)

Query: 271 KGWKIFQTLISYMRRK--IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTI 328
            G ++ + L ++M      +  Y E+ TP +++      +G +  ++ ++F ++  D T+
Sbjct: 169 LGARLERALYNFMLDLHVYEHGYTEMITPYIVNDTAMFGTGQFPKFKEDVFQLQDTDLTL 228

Query: 329 KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRG 385
                    P         +N+ +   ++LP+        +R+E   +     GL+R+  
Sbjct: 229 I--------PTAEVPLTNYYNNEILDGKDLPIYFTALSPSFRSEAGSAGRDTRGLIRLHQ 280

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALW 441
           F + +   F   E  + E  K+ N    I +  G    ++ LST              +W
Sbjct: 281 FNKVEMVKFSDAEHSYEELEKMTNNAEEILQKLGLPYRVMALSTGDMGFSAAKTYDLEVW 340

Query: 442 DDAENIMKGV 451
             A+   + +
Sbjct: 341 IPAQETYREI 350


>gi|58582562|ref|YP_201578.1| alanyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84624448|ref|YP_451820.1| alanyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|188575923|ref|YP_001912852.1| alanyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|75434894|sp|Q5GYM8|SYA_XANOR RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|123521587|sp|Q2P1N1|SYA_XANOM RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|205830287|sp|B2SUD0|SYA_XANOP RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|58427156|gb|AAW76193.1| alanyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84368388|dbj|BAE69546.1| alanyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|188520375|gb|ACD58320.1| alanyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 882

 Score = 69.4 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/132 (24%), Positives = 57/132 (43%), Gaps = 10/132 (7%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDELAQIEKKM 126
           R   ++ HS  H++  A++ +        G  +  D   +DF   QP ++DELA IE+K+
Sbjct: 563 RGKTILNHSATHLLHAALREVLGTHVQQKGSLVAPDRLRFDFSHFQPITADELAVIERKV 622

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRG 185
              +  +       ++ ++A +         K          ENV + + G +  +LC G
Sbjct: 623 NAEVRTNHGVEVHNMAMQEALDFGAMALFGEKY--------GENVRVLKMGGYSTELCGG 674

Query: 186 PHVRSTGQVKKF 197
            HV  TG +  F
Sbjct: 675 THVTRTGDIGLF 686


>gi|218132498|ref|ZP_03461302.1| hypothetical protein BACPEC_00357 [Bacteroides pectinophilus ATCC
           43243]
 gi|217992608|gb|EEC58610.1| hypothetical protein BACPEC_00357 [Bacteroides pectinophilus ATCC
           43243]
          Length = 868

 Score = 69.4 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/154 (22%), Positives = 65/154 (42%), Gaps = 11/154 (7%)

Query: 54  VREGSIEIITPEDP-RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKE 111
           ++ G    +T + P R+     HS  H++ +A++ +        G  ++ D   +DF   
Sbjct: 533 IKTGDTVTLTVDAPARAATCANHSATHLLQKALRDVLGTHVEQKGSYVDPDRLRFDFAHF 592

Query: 112 QPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENV 171
           Q  + DE+A +E  + E IA   P +   +S E A++         K          + V
Sbjct: 593 QAMTPDEIASVESIVNEKIAEALPVVTNIMSLEDAKKTGAMALFGEKY--------GDKV 644

Query: 172 TLYRQGEW-FDLCRGPHVRSTGQVKKFFKLMKVA 204
            +   G++  +LC G HV +T  +  F  + +  
Sbjct: 645 RVVSMGDFSTELCGGTHVANTSNIMLFKIVSESG 678


>gi|331084749|ref|ZP_08333837.1| alanyl-tRNA synthetase 1 [Lachnospiraceae bacterium 9_1_43BFAA]
 gi|330410843|gb|EGG90265.1| alanyl-tRNA synthetase 1 [Lachnospiraceae bacterium 9_1_43BFAA]
          Length = 879

 Score = 69.4 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 66/150 (44%), Gaps = 10/150 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFS 115
            ++ +      R      HS  H++ +A++++        G  +  D   +DF      +
Sbjct: 548 DTVTLEVKSKERLNTCKNHSATHLLQKALKTVLGSHVEQKGSLVTPDRLRFDFAHFSAMT 607

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            +E+  +E  + E IA+++P + + ++ E+A++         K E        E+V +  
Sbjct: 608 REEIEAVEALVNEEIAKNNPVVTEVMNVEEAKKTGAMALFGEKYE--------EDVRVVT 659

Query: 176 QGEW-FDLCRGPHVRSTGQVKKFFKLMKVA 204
            G++  +LC G HV +TG +  F  + +  
Sbjct: 660 MGDFSKELCGGTHVSNTGLITTFKIVSESG 689


>gi|29377733|ref|NP_816887.1| seryl-tRNA synthetase [Enterococcus faecalis V583]
 gi|227555642|ref|ZP_03985689.1| seryl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|229547172|ref|ZP_04435897.1| seryl-tRNA synthetase [Enterococcus faecalis TX1322]
 gi|229550742|ref|ZP_04439467.1| seryl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
 gi|255971509|ref|ZP_05422095.1| seryl-tRNA synthetase [Enterococcus faecalis T1]
 gi|255974459|ref|ZP_05425045.1| seryl-tRNA synthetase [Enterococcus faecalis T2]
 gi|256618568|ref|ZP_05475414.1| seryl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|256761814|ref|ZP_05502394.1| seryl-tRNA synthetase [Enterococcus faecalis T3]
 gi|256854941|ref|ZP_05560302.1| seryl-tRNA synthetase [Enterococcus faecalis T8]
 gi|256957056|ref|ZP_05561227.1| seryl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|256960920|ref|ZP_05565091.1| seryl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|256963942|ref|ZP_05568113.1| seryl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|257078733|ref|ZP_05573094.1| seryl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|257083965|ref|ZP_05578326.1| seryl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|257087795|ref|ZP_05582156.1| seryl-tRNA synthetase [Enterococcus faecalis D6]
 gi|257088440|ref|ZP_05582801.1| seryl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|257418881|ref|ZP_05595875.1| seryl-tRNA synthetase [Enterococcus faecalis T11]
 gi|257421304|ref|ZP_05598294.1| seryl-tRNA synthetase [Enterococcus faecalis X98]
 gi|293384815|ref|ZP_06630660.1| serine--tRNA ligase [Enterococcus faecalis R712]
 gi|293388237|ref|ZP_06632756.1| serine--tRNA ligase [Enterococcus faecalis S613]
 gi|294781208|ref|ZP_06746555.1| serine--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|300861572|ref|ZP_07107656.1| serine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|307268871|ref|ZP_07550236.1| seryl-tRNA synthetase [Enterococcus faecalis TX4248]
 gi|307273946|ref|ZP_07555156.1| seryl-tRNA synthetase [Enterococcus faecalis TX0855]
 gi|307277353|ref|ZP_07558451.1| seryl-tRNA synthetase [Enterococcus faecalis TX2134]
 gi|307283995|ref|ZP_07564165.1| seryl-tRNA synthetase [Enterococcus faecalis TX0860]
 gi|307286509|ref|ZP_07566608.1| seryl-tRNA synthetase [Enterococcus faecalis TX0109]
 gi|307289982|ref|ZP_07569908.1| seryl-tRNA synthetase [Enterococcus faecalis TX0411]
 gi|312901342|ref|ZP_07760623.1| seryl-tRNA synthetase [Enterococcus faecalis TX0470]
 gi|312902989|ref|ZP_07762178.1| seryl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|312908857|ref|ZP_07767796.1| seryl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
 gi|312952975|ref|ZP_07771831.1| seryl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|312979500|ref|ZP_07791182.1| seryl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
 gi|46577436|sp|Q82YY9|SYS2_ENTFA RecName: Full=Seryl-tRNA synthetase 2; AltName: Full=Serine--tRNA
           ligase 2; Short=SerRS 2; AltName:
           Full=Seryl-tRNA(Ser/Sec) synthetase 2
 gi|29345201|gb|AAO82957.1| seryl-tRNA synthetase [Enterococcus faecalis V583]
 gi|227175219|gb|EEI56191.1| seryl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|229304175|gb|EEN70171.1| seryl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
 gi|229307754|gb|EEN73741.1| seryl-tRNA synthetase [Enterococcus faecalis TX1322]
 gi|255962527|gb|EET95003.1| seryl-tRNA synthetase [Enterococcus faecalis T1]
 gi|255967331|gb|EET97953.1| seryl-tRNA synthetase [Enterococcus faecalis T2]
 gi|256598095|gb|EEU17271.1| seryl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|256683065|gb|EEU22760.1| seryl-tRNA synthetase [Enterococcus faecalis T3]
 gi|256709454|gb|EEU24501.1| seryl-tRNA synthetase [Enterococcus faecalis T8]
 gi|256947552|gb|EEU64184.1| seryl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|256951416|gb|EEU68048.1| seryl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|256954438|gb|EEU71070.1| seryl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|256986763|gb|EEU74065.1| seryl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|256991995|gb|EEU79297.1| seryl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|256995825|gb|EEU83127.1| seryl-tRNA synthetase [Enterococcus faecalis D6]
 gi|256997252|gb|EEU83772.1| seryl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|257160709|gb|EEU90669.1| seryl-tRNA synthetase [Enterococcus faecalis T11]
 gi|257163128|gb|EEU93088.1| seryl-tRNA synthetase [Enterococcus faecalis X98]
 gi|291077897|gb|EFE15261.1| serine--tRNA ligase [Enterococcus faecalis R712]
 gi|291082384|gb|EFE19347.1| serine--tRNA ligase [Enterococcus faecalis S613]
 gi|294451671|gb|EFG20126.1| serine--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|295112309|emb|CBL30946.1| seryl-tRNA synthetase [Enterococcus sp. 7L76]
 gi|300849033|gb|EFK76786.1| serine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|306498976|gb|EFM68468.1| seryl-tRNA synthetase [Enterococcus faecalis TX0411]
 gi|306502382|gb|EFM71659.1| seryl-tRNA synthetase [Enterococcus faecalis TX0109]
 gi|306503366|gb|EFM72615.1| seryl-tRNA synthetase [Enterococcus faecalis TX0860]
 gi|306505987|gb|EFM75159.1| seryl-tRNA synthetase [Enterococcus faecalis TX2134]
 gi|306509254|gb|EFM78314.1| seryl-tRNA synthetase [Enterococcus faecalis TX0855]
 gi|306514787|gb|EFM83337.1| seryl-tRNA synthetase [Enterococcus faecalis TX4248]
 gi|310625295|gb|EFQ08578.1| seryl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
 gi|310629116|gb|EFQ12399.1| seryl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|310633657|gb|EFQ16940.1| seryl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|311287682|gb|EFQ66238.1| seryl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
 gi|311291575|gb|EFQ70131.1| seryl-tRNA synthetase [Enterococcus faecalis TX0470]
 gi|315026612|gb|EFT38544.1| seryl-tRNA synthetase [Enterococcus faecalis TX2137]
 gi|315030106|gb|EFT42038.1| seryl-tRNA synthetase [Enterococcus faecalis TX4000]
 gi|315033599|gb|EFT45531.1| seryl-tRNA synthetase [Enterococcus faecalis TX0017]
 gi|315036264|gb|EFT48196.1| seryl-tRNA synthetase [Enterococcus faecalis TX0027]
 gi|315143579|gb|EFT87595.1| seryl-tRNA synthetase [Enterococcus faecalis TX2141]
 gi|315148283|gb|EFT92299.1| seryl-tRNA synthetase [Enterococcus faecalis TX4244]
 gi|315151248|gb|EFT95264.1| seryl-tRNA synthetase [Enterococcus faecalis TX0012]
 gi|315153733|gb|EFT97749.1| seryl-tRNA synthetase [Enterococcus faecalis TX0031]
 gi|315155041|gb|EFT99057.1| seryl-tRNA synthetase [Enterococcus faecalis TX0043]
 gi|315158670|gb|EFU02687.1| seryl-tRNA synthetase [Enterococcus faecalis TX0312]
 gi|315163393|gb|EFU07410.1| seryl-tRNA synthetase [Enterococcus faecalis TX0645]
 gi|315165668|gb|EFU09685.1| seryl-tRNA synthetase [Enterococcus faecalis TX1302]
 gi|315168475|gb|EFU12492.1| seryl-tRNA synthetase [Enterococcus faecalis TX1341]
 gi|315172092|gb|EFU16109.1| seryl-tRNA synthetase [Enterococcus faecalis TX1342]
 gi|315174225|gb|EFU18242.1| seryl-tRNA synthetase [Enterococcus faecalis TX1346]
 gi|315576187|gb|EFU88378.1| seryl-tRNA synthetase [Enterococcus faecalis TX0309B]
 gi|315579766|gb|EFU91957.1| seryl-tRNA synthetase [Enterococcus faecalis TX0630]
 gi|315582998|gb|EFU95189.1| seryl-tRNA synthetase [Enterococcus faecalis TX0309A]
 gi|323479199|gb|ADX78638.1| seryl-tRNA synthetase [Enterococcus faecalis 62]
 gi|327536390|gb|AEA95224.1| serine--tRNA ligase [Enterococcus faecalis OG1RF]
 gi|329577273|gb|EGG58736.1| serine--tRNA ligase [Enterococcus faecalis TX1467]
          Length = 423

 Score = 69.4 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 74/190 (38%), Gaps = 17/190 (8%)

Query: 271 KGWKIFQTLISYMRRK--IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTI 328
            G ++ + L ++M      +  Y E+ TP +++      +G +  ++ ++F ++  D T+
Sbjct: 169 LGARLERALYNFMLDLHVYEHGYTEMITPYIVNDTAMFGTGQFPKFKEDVFQLQDTDLTL 228

Query: 329 KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRG 385
                    P         +N+ +   ++LP+        +R+E   +     GL+R+  
Sbjct: 229 I--------PTAEVPLTNYYNNEILDGKDLPIYFTALSPSFRSEAGSAGRDTRGLIRLHQ 280

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALW 441
           F + +   F   E  + E  K+ N    I +  G    ++ LST              +W
Sbjct: 281 FNKVEMVKFSDAEHSYEELEKMTNNAEEILQKLGLPYRVMALSTGDMGFSAAKTYDLEVW 340

Query: 442 DDAENIMKGV 451
             A+   + +
Sbjct: 341 IPAQETYREI 350


>gi|323692006|ref|ZP_08106254.1| alanine-tRNA ligase [Clostridium symbiosum WAL-14673]
 gi|323503929|gb|EGB19743.1| alanine-tRNA ligase [Clostridium symbiosum WAL-14673]
          Length = 879

 Score = 69.4 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 64/143 (44%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFS 115
            ++ +   ++ R L    HS  H++ +A++++        G  + +D   +DF      +
Sbjct: 548 DTVTLKVDKENRELTERNHSATHLLHKALRTVLGTHVEQAGSLVTKDRLRFDFTHFSAMT 607

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            +E+A +EK + + IA   P     ++ ++A++         K          ++V + +
Sbjct: 608 DEEIAAVEKLVNDEIAAALPVETMVMTLDEAKKTGAMALFGEKY--------GDSVRVVK 659

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G++  +LC G HV +T  +  F
Sbjct: 660 MGDFSTELCGGTHVDNTSSISAF 682


>gi|323486958|ref|ZP_08092273.1| hypothetical protein HMPREF9474_04024 [Clostridium symbiosum
           WAL-14163]
 gi|323399730|gb|EGA92113.1| hypothetical protein HMPREF9474_04024 [Clostridium symbiosum
           WAL-14163]
          Length = 817

 Score = 69.4 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 64/143 (44%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFS 115
            ++ +   ++ R L    HS  H++ +A++++        G  + +D   +DF      +
Sbjct: 486 DTVTLKVDKENRELTERNHSATHLLHKALRTVLGTHVEQAGSLVTKDRLRFDFTHFSAMT 545

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            +E+A +EK + + IA   P     ++ ++A++         K          ++V + +
Sbjct: 546 DEEIAAVEKLVNDEIAAALPVETMVMTLDEAKKTGAMALFGEKY--------GDSVRVVK 597

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G++  +LC G HV +T  +  F
Sbjct: 598 MGDFSTELCGGTHVDNTSSISAF 620


>gi|171057383|ref|YP_001789732.1| seryl-tRNA synthetase [Leptothrix cholodnii SP-6]
 gi|238689100|sp|B1Y0I6|SYS_LEPCP RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|170774828|gb|ACB32967.1| seryl-tRNA synthetase [Leptothrix cholodnii SP-6]
          Length = 431

 Score = 69.4 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/221 (18%), Positives = 83/221 (37%), Gaps = 16/221 (7%)

Query: 244 RDHRKLAREMDL-FHIAEDGSGVIF-WHRKG--WKIFQTLISYM--RRKIKDDYEEINTP 297
           RDH  L   + L F  +   SG  F +  KG   ++ + L  +M   +  +  Y E  TP
Sbjct: 140 RDHVDLGAPLGLDFETSAKLSGARFSFL-KGPAARLHRALAQFMLDVQTQEHGYTECYTP 198

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++++ + + +G    ++ +MF V    D  +  +       +           + +  +
Sbjct: 199 YIVNREVLEGTGQLPKFKEDMFWVSRGGDETQPEQYLIS--TSEISLTNSVREQVLAADQ 256

Query: 358 LPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           LP++L      +R+E   +     GL+R   F + +     T EQ       +     ++
Sbjct: 257 LPIKLTAHSPCFRSEAGSAGRDTRGLIRQHQFDKVEMVQITTPEQSDAALESMVGHAEAV 316

Query: 415 YKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
            +  G    ++ LST              +W  A+   + +
Sbjct: 317 LQKLGLPYRVLLLSTGDMGFGSAKTYDLEVWVPAQATYREI 357


>gi|219684604|ref|ZP_03539547.1| glycyl-tRNA synthetase [Borrelia garinii PBr]
 gi|219671966|gb|EED29020.1| glycyl-tRNA synthetase [Borrelia garinii PBr]
          Length = 445

 Score = 69.4 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 63/432 (14%), Positives = 126/432 (29%), Gaps = 70/432 (16%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKDDYEEIN---TPQVLDQHLWQQSGHWDSYRANMF 319
           SG   +   G ++ + + S   + +   +E I    +   +   +W+ SGH D +  +M 
Sbjct: 28  SGAWDYGPLGVELKKNIKSEWWKSMVYLHENIVGLDSAIFMRPEIWRASGHIDGFSDSMV 87

Query: 320 AVKCADDTIKDL--------------------------------------RTFALKPMNC 341
             K      +                                            L+P   
Sbjct: 88  DCKDCKSRFRADFVDLSKNCPNCKVGNNFTSPRSFNLMFKTHIGVVEDSSNEIYLRPETA 147

Query: 342 PGHVAVFNHGLKSYR-ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQ 399
            G    F + L S R ++P  +A+ G  +RNE   + + + R   F Q +   F    + 
Sbjct: 148 QGIFVNFRNVLDSSRLKIPFGIAQVGKAFRNEIV-TKNFIFRTCEFEQMEMQFFVHPKQI 206

Query: 400 MFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSS 459
               C    N +    +        ++       ++   A         K   D      
Sbjct: 207 DEWFCYWQQNRMNFFIETLKIRPDKLRFKAHDSTQLAHYA---------KSAFDI----- 252

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
           +     G    EG      ++         + +      D     R+    + + +    
Sbjct: 253 EYEFPFGFQEVEGIHNRGNYDLTQHSKFSNNPKIFEYH-DLLTKERYVPHVIETSAGLTR 311

Query: 520 PVMIHRAVFGSIERFIGIMIENFK---GNLPLWLSPIQAIVTTITSSA--VEYAQEIANL 574
            V++      S E     + +  K     L   L+P +  +  +      VE A+ I   
Sbjct: 312 SVLMTLCNAYSEEE----LSDGDKRIVLRLHPKLAPYKIAIFPLVKKVELVEIARRIYME 367

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           L      I  D    TI  + R       P  +        + ++ +R   + T +++ +
Sbjct: 368 LCD-DFHIFYDDSG-TIGKRYRRQDEIGTPYCVTVDYNTIEDETVTVRERNNMTQKRIFI 425

Query: 635 LDAIPILTKESL 646
            D    +  E L
Sbjct: 426 NDLYSYIKTEIL 437


>gi|184154542|ref|YP_001842882.1| seryl-tRNA synthetase [Lactobacillus fermentum IFO 3956]
 gi|238689196|sp|B2GF13|SYS_LACF3 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|183225886|dbj|BAG26402.1| seryl-tRNA synthase [Lactobacillus fermentum IFO 3956]
          Length = 432

 Score = 69.4 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 53/353 (15%), Positives = 115/353 (32%), Gaps = 44/353 (12%)

Query: 107 DFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIP 166
           + D ++     +   ++ K  E   +     +   S ++A        E  K        
Sbjct: 33  ELDAKRRELLQQTETLKAKRNEASKKIGEAKRAKQSADEAIAEMRQVGEDIKAL------ 86

Query: 167 AKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWN 226
             E V    +  +  L   P+V   G      +                 L ++      
Sbjct: 87  -DEQVEANDKDLFDKLAHLPNVPHEGVPVSLTED------------GAEELRKVGQARQF 133

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYM-RR 285
              E   +    E     D  +  +      +   G         G ++ + L ++M   
Sbjct: 134 D-FEPKHHWEIGENLGILDFERAGKVSGSRFVYYVG--------LGAQLERALYNFMLDE 184

Query: 286 KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +K+ Y E+  P +++ H    +G +  ++ +++ V        +     L P       
Sbjct: 185 HMKEGYTEVLPPYIVNAHAMYGTGQFPKFKQDVYQV--------NGEDMTLIPTAEVPLT 236

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFN 402
             F   +    +LPV +      +R+E   +     GL+R+  F + +   +  ++Q + 
Sbjct: 237 NYFAGEVIPAEKLPVYVTALTPSFRSEAGSAGRDTRGLIRMHQFNKVEMVKYTKQDQSWE 296

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD----ALWDDAENIMKGV 451
           E  K+     +I +  G    ++ L+T       S+     LW  A+N  + V
Sbjct: 297 ELDKMTANAENILQKLGLPYHVITLTTSDMSFTASETHDLELWMPAQNKYREV 349


>gi|222150263|ref|YP_002559416.1| seryl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
 gi|254783034|sp|B9E909|SYS_MACCJ RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|222119385|dbj|BAH16720.1| seryl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
          Length = 423

 Score = 69.4 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 36/252 (14%), Positives = 85/252 (33%), Gaps = 24/252 (9%)

Query: 208 WRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIF 267
           +  D +  +  + +GT      E   +   +E  +  D  + A+               F
Sbjct: 114 FGKDEDENVEVKKWGTPRTFDFEAKAHWDIVENLKMADFERAAKVSGARF--------AF 165

Query: 268 WHRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADD 326
             + G ++ + L+++M      + YEE+ TPQ+++      +G    +  ++F V     
Sbjct: 166 LTKDGARLERALMNFMLDTHRANGYEEMVTPQLVNAASMFGTGQLPKFEEDLFKV----- 220

Query: 327 TIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRV 383
              +       P +       +   + +   LP +     + +R+E   +     GL+R+
Sbjct: 221 ---EKEGLYTIPTSEVPLTNFYRDEILTNDMLPTKFTAMTACFRSEAGSAGRDTRGLIRM 277

Query: 384 RGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDA 439
             F + +   F   E  +     +     SI +        + L +              
Sbjct: 278 HQFNKVEMVRFERPEDSYAALEDMTRSAESILEKLNIPYRTIALCSGDIGFGAAKTYDVE 337

Query: 440 LWDDAENIMKGV 451
           +W  + +  K +
Sbjct: 338 VWLPSYDAYKEI 349


>gi|199598496|ref|ZP_03211914.1| Seryl-tRNA synthetase [Lactobacillus rhamnosus HN001]
 gi|258508888|ref|YP_003171639.1| seryl-tRNA synthetase [Lactobacillus rhamnosus GG]
 gi|199590680|gb|EDY98768.1| Seryl-tRNA synthetase [Lactobacillus rhamnosus HN001]
 gi|257148815|emb|CAR87788.1| Seryl-tRNA synthetase [Lactobacillus rhamnosus GG]
 gi|259650182|dbj|BAI42344.1| seryl-tRNA synthetase [Lactobacillus rhamnosus GG]
          Length = 427

 Score = 69.4 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 50/337 (14%), Positives = 110/337 (32%), Gaps = 20/337 (5%)

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ-GEWFDL 182
           +++ E+IA D    K  +  E+ +           V       A E +T  R+ G+    
Sbjct: 26  EEIDELIALDEKRRKVTVQTEELKAKRNEVSGQIAVMKRNKENADEQITAMREVGQKISQ 85

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
                     +V        V    +  D     L+    +    +     +  F  +  
Sbjct: 86  LDKELAELNEKVTYIL----VRLPNFPADDVPMSLNE-DDSREEYKWGNIPHFDFQPKHH 140

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQVLD 301
                KL            GS  +++   G ++ + + ++ +    K+ YEEI  P +++
Sbjct: 141 WDIGEKLGILDFERAAKVSGSRFVYYKGAGARLERAVYNFFLDEHQKEGYEEIIPPYLVN 200

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
                 +G +  +    + +        D     + P      V  +   +    +LPV 
Sbjct: 201 NDSMFGTGQFPKFTDATYTIT------NDGEPLTMIPTAEVPLVNYYRGDIIDAAKLPVN 254

Query: 362 LAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
                  +R+E   +     GL+R+  F + +   FC  E  + E   + +    + +  
Sbjct: 255 FTALTPAFRSEAGSAGRDTRGLIRMHQFNKVEMVKFCKPEDSWQELKNLIHDAEDLLRKL 314

Query: 419 GFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
           G    ++ L++              +W  A+N  + +
Sbjct: 315 GLPYHVITLASNDASFTSAKTNDLEVWFPAQNRYREI 351


>gi|166712451|ref|ZP_02243658.1| alanyl-tRNA synthetase [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 882

 Score = 69.4 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/132 (24%), Positives = 57/132 (43%), Gaps = 10/132 (7%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDELAQIEKKM 126
           R   ++ HS  H++  A++ +        G  +  D   +DF   QP ++DELA IE+K+
Sbjct: 563 RGKTILNHSATHLLHAALRDVLGTHVQQKGSLVAPDRLRFDFSHFQPITADELAVIERKV 622

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRG 185
              +  +       ++ ++A +         K          ENV + + G +  +LC G
Sbjct: 623 NAEVRTNHGVEVHNMAMQEALDFGAMALFGEKY--------GENVRVLKMGGYSTELCGG 674

Query: 186 PHVRSTGQVKKF 197
            HV  TG +  F
Sbjct: 675 THVTRTGDIGLF 686


>gi|6707748|sp|Q9XDM3|SYA_AQUPY RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|4587716|gb|AAD25871.1|AF027500_1 alanyl-tRNA synthetase [Aquifex pyrophilus]
          Length = 871

 Score = 69.4 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/143 (21%), Positives = 66/143 (46%), Gaps = 11/143 (7%)

Query: 65  EDPRSLAVIR-HSCAHIMAEAVQSIWPEVQVAIGPIIEDGF-YYDFDKEQPFSSDELAQI 122
           +  R   ++R H+  H++  A++++  E     G ++ D +  +DF    P + +E+ +I
Sbjct: 548 DKERRWDIMRNHTATHLLHAALRNLLGEHVRQAGSLVADKYLRFDFTHFSPLTEEEIKRI 607

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FD 181
           E+ + E I  + P     +++++A +         K          E V +   GE+  +
Sbjct: 608 EELVNEKIRENLPVSVMEMAYQEALQTGAIAIFEEKY--------GERVRVISCGEFSKE 659

Query: 182 LCRGPHVRSTGQVKKFFKLMKVA 204
           LC G HV +TG +  F  + + +
Sbjct: 660 LCGGTHVSATGDIGYFKIISESS 682


>gi|256848554|ref|ZP_05553995.1| seryl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
 gi|256714606|gb|EEU29586.1| seryl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
          Length = 435

 Score = 69.4 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 49/353 (13%), Positives = 116/353 (32%), Gaps = 44/353 (12%)

Query: 107 DFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIP 166
           + D+++     ++  ++ +  E   +     +   S E+A +      +  K        
Sbjct: 33  ELDQKRRELLQKVEALKAQRNEASKKIGEAKRNGQSAEEAIKETRDLGDQIK-------G 85

Query: 167 AKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWN 226
             E V    +  +  + R P+V          +   V             L ++      
Sbjct: 86  LDEKVEANDEVFYDKMSRLPNVPHDDVPVSLTEDGAVE------------LRKVGQVRDF 133

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYM-RR 285
              E   +    E     D  +  +      +        ++   G ++ + + ++M   
Sbjct: 134 D-FEPKHHWDVGENLGILDFDRARKVSGARFV--------YYLGLGAQLERAVYNFMLDE 184

Query: 286 KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +KD Y E+  P +++      +G +  ++  ++ V        +     L P       
Sbjct: 185 HMKDGYTEVLPPYIVNAKSMYGTGQFPKFKEGVYQV--------NGEDMTLIPTAEVPLT 236

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFN 402
             +   +   +ELPV +      +R+E   +     GL+R+  F + +   +   E  ++
Sbjct: 237 NYYRGDVIPEQELPVYVTALTPCFRSEAGAAGRDTRGLIRMHQFNKVEMVKYTKPEDSWD 296

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
           E  K+     +I K  G    ++ L++              LW  A+N  + V
Sbjct: 297 ELEKMTANAENILKKLGLPYHVITLTSSDMSFTASMTHDLELWMPAQNKYREV 349


>gi|227514189|ref|ZP_03944238.1| serine--tRNA ligase [Lactobacillus fermentum ATCC 14931]
 gi|260662603|ref|ZP_05863498.1| seryl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN]
 gi|227087452|gb|EEI22764.1| serine--tRNA ligase [Lactobacillus fermentum ATCC 14931]
 gi|260553294|gb|EEX26237.1| seryl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN]
 gi|299782726|gb|ADJ40724.1| Seryl-tRNA synthetase [Lactobacillus fermentum CECT 5716]
          Length = 432

 Score = 69.4 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 53/353 (15%), Positives = 115/353 (32%), Gaps = 44/353 (12%)

Query: 107 DFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIP 166
           + D ++     +   ++ K  E   +     +   S ++A        E  K        
Sbjct: 33  ELDAKRRELLQQTETLKAKRNEASKKIGEAKRAKQSADEAIAEMRQVGEDIKAL------ 86

Query: 167 AKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWN 226
             E V    +  +  L   P+V   G      +                 L ++      
Sbjct: 87  -DEQVEANDKDLFDKLAHLPNVPHEGVPVSLTED------------GAEELRKVGQARQF 133

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYM-RR 285
              E   +    E     D  +  +      +   G         G ++ + L ++M   
Sbjct: 134 D-FEPKHHWEIGENLGILDFERAGKVSGSRFVYYVG--------LGAQLERALYNFMLDE 184

Query: 286 KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +K+ Y E+  P +++ H    +G +  ++ +++ V        +     L P       
Sbjct: 185 HMKEGYTEVLPPYIVNAHAMYGTGQFPKFKQDVYQV--------NGEDMTLIPTAEVPLT 236

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFN 402
             F   +    +LPV +      +R+E   +     GL+R+  F + +   +  ++Q + 
Sbjct: 237 NYFAGEVIPAEKLPVYVTALTPSFRSEAGSAGRDTRGLIRMHQFNKVEMVKYTKQDQSWE 296

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD----ALWDDAENIMKGV 451
           E  K+     +I +  G    ++ L+T       S+     LW  A+N  + V
Sbjct: 297 ELDKMTANAENILQKLGLPYHVITLTTSDMSFTASETHDLELWMPAQNKYREV 349


>gi|169825637|ref|YP_001695795.1| seryl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
 gi|238688179|sp|B1HS47|SYS_LYSSC RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|168990125|gb|ACA37665.1| Seryl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
          Length = 426

 Score = 69.4 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 45/357 (12%), Positives = 112/357 (31%), Gaps = 48/357 (13%)

Query: 107 DFDKEQPFSSDELAQIEKKMQEIIARDSPF---LKQYLSHEKARELFESKKEAYKVEILE 163
           DF+       + +A+ E+   E            +   + ++         +  K   ++
Sbjct: 30  DFENLDAKRRELIAKTEELKAERNKVSEQISVMKRNKENADEVIARMRQVGDEIKELDIQ 89

Query: 164 SIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
               ++              R P+V          +   V    W             G 
Sbjct: 90  LNDVEDRFKDMMM-------RLPNVPHESVPVGTTEDDNVEEYTW-------------GE 129

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYM 283
                 E+  +     + +  D  + A+           S  +F+   G ++ + L+++M
Sbjct: 130 IPAFDFEIKAHWDLATDLKIVDFERGAKVTG--------SRFLFYRGLGARLERALMTFM 181

Query: 284 RRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
                +   YEE+  P ++++     +G    +  ++F +   D        + + P   
Sbjct: 182 MDLHAEEHGYEEMLPPVIVNRESLTGTGQLPKFEEDVFKLAETD--------YFMIPTAE 233

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKE 398
                 +   + +   LP   A + + +R+E   +     GL+R   F + +   F   E
Sbjct: 234 VPVTNFYRDEILTAEALPQGFAAYSACFRSEAGSAGRDTRGLIRQHQFNKVELVRFVKPE 293

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENIMKGV 451
           + + +   +      + +  G     +K+ T              +W  A+N+ + +
Sbjct: 294 ESYEQLELLTGHAEKVLQLLGLPYRKLKMCTADLGFTAAKKYDLEVWIPAQNMYREI 350


>gi|29374751|ref|NP_813903.1| seryl-tRNA synthetase [Enterococcus faecalis V583]
 gi|227555780|ref|ZP_03985827.1| seryl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|257418758|ref|ZP_05595752.1| seryl-tRNA synthetase [Enterococcus faecalis T11]
 gi|46577438|sp|Q839Q8|SYS1_ENTFA RecName: Full=Seryl-tRNA synthetase 1; AltName: Full=Serine--tRNA
           ligase 1; Short=SerRS 1; AltName:
           Full=Seryl-tRNA(Ser/Sec) synthetase 1
 gi|29342209|gb|AAO79975.1| seryl-tRNA synthetase [Enterococcus faecalis V583]
 gi|227175076|gb|EEI56048.1| seryl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|257160586|gb|EEU90546.1| seryl-tRNA synthetase [Enterococcus faecalis T11]
          Length = 423

 Score = 69.4 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/223 (16%), Positives = 86/223 (38%), Gaps = 21/223 (9%)

Query: 242 EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEIN 295
           E + H ++   + +          GS  +++   G ++ + + ++M  +  +   Y E+ 
Sbjct: 136 EPKPHWEIGEALGILDFERGAKVSGSRFLYYKGLGARLERAVYNFMLDQHVNEHGYTEVI 195

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
            P +++      +G +  ++ ++F V  +D T+         P         +N+ +   
Sbjct: 196 PPYLVNSKAMFGTGQFPKFKEDVFQVAESDLTLI--------PTAEVPLTNYYNNEILDA 247

Query: 356 RELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
           +ELP+        +R+E   +     GL+R+  F + +   F   E  + E  K+ N   
Sbjct: 248 QELPIYFTALSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFSDAEHSYEELEKMTNNAG 307

Query: 413 SIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
            I +  G    ++ LST              +W  A+   + +
Sbjct: 308 DILEKLGLPYRVITLSTGDMGFSAAKTYDLEVWIPAQKTYREI 350


>gi|227529785|ref|ZP_03959834.1| seryl-tRNA synthetase [Lactobacillus vaginalis ATCC 49540]
 gi|227350269|gb|EEJ40560.1| seryl-tRNA synthetase [Lactobacillus vaginalis ATCC 49540]
          Length = 431

 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 53/346 (15%), Positives = 113/346 (32%), Gaps = 47/346 (13%)

Query: 117 DELAQIEKKMQEIIARDSPF---LKQYLSHEKARELFESKKEAYKVEILESIPAKENVTL 173
           D L + E    +            +   S + A +      +  K E+ E + A + V  
Sbjct: 40  DLLQKTEALKAQRNDASKKIGEAKRNGESADDAIKETRELGDQIK-ELDEQVEANDEVFH 98

Query: 174 YRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQ 233
            +        R P++   G      +   V             L ++         E   
Sbjct: 99  DKM------SRLPNIPHDGVPVSLTEEGSVE------------LRKVGKIRDFD-FEPKH 139

Query: 234 YLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYE 292
           +    E     D  +  +      +        ++   G ++ + + ++M    +KD Y 
Sbjct: 140 HWDVGENLGILDFDRARKVSGARFV--------YYLGLGAQLERAVYNFMLDEHMKDGYT 191

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +++      +G +  ++  ++ V        +     L P         +   +
Sbjct: 192 EVLPPYIVNAASMYGTGQFPKFKKGVYQV--------NGEDMTLIPTAEVPLTNYYRGDV 243

Query: 353 KSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
               ELPV +      +R+E   +     GL+R+  F + +   +   E  ++E  K+  
Sbjct: 244 IPAEELPVYVTALTPCFRSEAGAAGRDTRGLIRMHQFNKVEMVKYTKPEDSWDELEKMTA 303

Query: 410 LIISIYKDFGFEKIMVKLSTRPEKRVGSD----ALWDDAENIMKGV 451
              +I K  G    ++ L+T       S+     LW  A+N  + V
Sbjct: 304 NAENILKKLGLPYHVITLTTSDMSFTASETHDLELWMPAQNKYREV 349


>gi|254460942|ref|ZP_05074358.1| alanyl-tRNA synthetase [Rhodobacterales bacterium HTCC2083]
 gi|206677531|gb|EDZ42018.1| alanyl-tRNA synthetase [Rhodobacteraceae bacterium HTCC2083]
          Length = 887

 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/163 (24%), Positives = 69/163 (42%), Gaps = 14/163 (8%)

Query: 44  NGKVCDLSDPVREGSIEIITPEDPRSLAVI-RHSCAHIMAEAVQSIWPEVQVAIGP-IIE 101
           +G++        +GS  I+  +  R  A+   HS  H++ EA+++   +     G    E
Sbjct: 538 DGEII-------KGSAAILEVDHGRRTAIRANHSATHLLHEALRAALGDHVAQRGSLNAE 590

Query: 102 DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKAREL--FESKKEAYKV 159
           D   +DF      SS++L ++EK +   I +++P   + ++ + AR L       E Y  
Sbjct: 591 DRLRFDFSHSAALSSEDLIKVEKDVNTYIRQNAPVETRIMTPDDARALGAQALFGEKYGD 650

Query: 160 E---ILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFK 199
           E   +     A        Q    +LC G HVR TG +  F  
Sbjct: 651 EVRVVSMGTQAGSGKGSNGQTYSLELCGGTHVRQTGDIGAFVL 693


>gi|240102364|ref|YP_002958672.1| histidyl-tRNA synthetase [Thermococcus gammatolerans EJ3]
 gi|239909917|gb|ACS32808.1| Histidyl-tRNA synthetase (hisS) [Thermococcus gammatolerans EJ3]
          Length = 435

 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 70/444 (15%), Positives = 136/444 (30%), Gaps = 102/444 (22%)

Query: 268 WHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADD 326
           +  +     + +   +R   +  ++ E+ TP      L++               +    
Sbjct: 12  FLPEEMAKRRWVFERIREVFERYNFHEVLTPTFEYTELFKLRS------GEEVVKQLYAF 65

Query: 327 TIKDLRTFALKP-MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE--PSGSLHGLMRV 383
             K  R  +L+P M         +    + +  P++     +++R E   SG      R 
Sbjct: 66  LDKGGRDISLRPDMTSSVARLYVSAFQTAPK--PIKWYYIANMFRYEEPQSG------RF 117

Query: 384 RGFTQ---------------------DDAHVFCTKEQ---------MFNECLKIHNLIIS 413
           R F Q                      ++++    E          + +E  K+  +   
Sbjct: 118 REFWQAGVELIGSDKVEADAEVIALFTESYLATGLEDFTVNIGDRVLLDEFAKMLGVKDD 177

Query: 414 I--------------------YKDFGFEKIMVKLSTRPEKRVGS-DALWDDAENI----- 447
           I                     KDFG     V+      +  G  D +   AE +     
Sbjct: 178 IGLMRLIDKKDKLTQEEFVKALKDFGLSDEDVEKVLSLVEIKGEPDEVLPKAEELFTSEK 237

Query: 448 ----------MKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ 497
                     +  +LD    S   RI+ G+  G   +    FE I  + +G     G  +
Sbjct: 238 AKAEIRRLYELVDLLDAYGVSKWIRIDLGIARGFDYYTSVVFEAIAPNDLGIGSIGGGGR 297

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP-LWLSPIQAI 556
            D NL   F             P        G IER I I+   +KG +P + L P    
Sbjct: 298 YD-NLIEVFG----------GKPTPATGFAIG-IERLIPIL--EWKGLIPEIRLRPD-VY 342

Query: 557 VTTITSSAV--EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
           V  I       + A E+ + L+   +  + +     +   +       +P +++ G ++ 
Sbjct: 343 VIPIGKDVELRKTAVEVVSALRRAGVKADVELTGRKLRKALDHAGRLNVPYVVLIGKRDL 402

Query: 615 SERSIGIRRFGSTTTQKVSLLDAI 638
              ++ IR   +   + V     +
Sbjct: 403 ENGNVTIRDMETGEQRVVKKEGIV 426


>gi|116329504|ref|YP_799224.1| seryl-tRNA synthetase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116329819|ref|YP_799537.1| seryl-tRNA synthetase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|122282406|sp|Q04WE1|SYS_LEPBJ RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|122282717|sp|Q04XA4|SYS_LEPBL RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|116122248|gb|ABJ80291.1| Serine--tRNA ligase [Leptospira borgpetersenii serovar Hardjo-bovis
           L550]
 gi|116123508|gb|ABJ74779.1| Serine--tRNA ligase [Leptospira borgpetersenii serovar Hardjo-bovis
           JB197]
          Length = 417

 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/156 (17%), Positives = 57/156 (36%), Gaps = 13/156 (8%)

Query: 272 GWKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
           G K+ + L+++M      +  Y E+  P +++      +G +  ++   + +        
Sbjct: 171 GAKLERALMNFMLDVHTKEHGYTEVWVPSMVNDESMTATGQYPKFKDEFYRI-------- 222

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGF 386
           +     L P        ++   +    +LP+ +    S +R E         GL+RV  F
Sbjct: 223 EKDELNLIPTAEVPLTNLYRDEIIPEDQLPISVTAHTSCFRREAGSYGKDTRGLVRVHQF 282

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            + +   FC  E    E  K+ +   +I K      
Sbjct: 283 QKVELVKFCKPEDSEEEHKKMLSHAENILKKLKLPY 318


>gi|212638574|ref|YP_002315094.1| histidyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
 gi|226737064|sp|B7GFR0|SYH_ANOFW RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|212560054|gb|ACJ33109.1| Histidyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
          Length = 423

 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 69/421 (16%), Positives = 131/421 (31%), Gaps = 61/421 (14%)

Query: 269 HRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
             +    +Q +    R   +  +Y+EI TP        +          ++   +     
Sbjct: 13  LPEQAAKWQYIEHIARELCRRYNYQEIRTPIF---EHTELFLRGVGDTTDIVQKEMYTFE 69

Query: 328 IKDLRTFALKP--MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRG 385
            +  R+  L+P          V N       + PV+L   G ++R E   +     R R 
Sbjct: 70  DRGGRSLTLRPEGTAAVVRSFVENKMYGDPNQ-PVKLYYMGPMFRYERPQA----GRFRQ 124

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG-------------------------- 419
           F Q       + +   +   ++  L + IY+  G                          
Sbjct: 125 FVQFGVEALGSNDPAIDA--EVIALAMDIYRMLGLKKLKLVINSLGDVESRKAHRQALID 182

Query: 420 -FEKIMVKLSTRPEKRVGS------DALWDDAENIMKGV---LDTIKNSSQDRINTGVLL 469
            F+  + +     + R+        D   D    +M+     LD +   S+       + 
Sbjct: 183 HFQPRIHEFCDDCQARLHKNPMRILDCKKDRDHELMRTAPSILDYLNEQSRTYFEKVQMY 242

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS--------EKCHPV 521
            +    G  FE   +   G D+   T     +    F A               E   P 
Sbjct: 243 LQK--LGIAFEVDSRLVRGLDYYNHTAFEIMSEAEGFGAITTLCGGGRYNGLVQEIGGPE 300

Query: 522 MIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLS 581
                   SIER +  + E    +LP+    I   V  +   A E A  +   L+   +S
Sbjct: 301 TPGIGFALSIERLLAAL-EAEGISLPIS-EGIDCYVVALGEQAKEEAVALVAALRKEGIS 358

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            E D+++  +  +++         + I G+ E  +  I ++   +   Q+VSL   I  +
Sbjct: 359 AEKDYQDRKVKAQLKAADRLHATYVAILGEDELQKGVINVKHMATGEQQEVSLHTFISHM 418

Query: 642 T 642
            
Sbjct: 419 K 419


>gi|152980660|ref|YP_001352847.1| seryl-tRNA synthetase [Janthinobacterium sp. Marseille]
 gi|166222735|sp|A6SX50|SYS_JANMA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|151280737|gb|ABR89147.1| Seryl-tRNA synthetase [Janthinobacterium sp. Marseille]
          Length = 431

 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 43/222 (19%), Positives = 81/222 (36%), Gaps = 13/222 (5%)

Query: 242 EKRDHRKLAREMDL-FHIAEDGSGVIFWHRKG--WKIFQTLISYMRRKIKD--DYEEINT 296
           E RDH  +   + L F +A   +G  F   KG   ++ + L  +M         Y E  T
Sbjct: 135 EIRDHVDVGAALGLDFDVAAKITGSRFSVMKGGIARLHRALAQFMLDTHTAEHGYTECYT 194

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +++    Q +G    + A++FAVK       +     L P        +    + +  
Sbjct: 195 PYIVNADSLQGTGQLPKFEADLFAVKKGGQE-GEGEALYLIPTAEVPLTNIVRDEIVAGD 253

Query: 357 ELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
            LP+R+      +R+E         G++R   F + +       E+ +    ++     +
Sbjct: 254 ALPIRMTAHSPCFRSEAGSYGRDTRGMIRQHQFDKVEMVQVVHPEKSYEALDEMCGHAEN 313

Query: 414 IYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
           I K  G    ++ L T              +W  A+N  + +
Sbjct: 314 ILKKLGLPYRVITLCTGDMGFGATKTYDLEVWLPAQNTYREI 355


>gi|255994167|ref|ZP_05427302.1| histidine--tRNA ligase [Eubacterium saphenum ATCC 49989]
 gi|255993835|gb|EEU03924.1| histidine--tRNA ligase [Eubacterium saphenum ATCC 49989]
          Length = 418

 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 65/419 (15%), Positives = 142/419 (33%), Gaps = 53/419 (12%)

Query: 269 HRKGWKIFQTLI-SYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
             K   +F+ L   +++      Y EI TP +      +          ++   +     
Sbjct: 12  MPKETALFRYLENEFLKVASSYGYNEIMTPVI---EYTELFSRGVGSGTDIVQKEMYTFK 68

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
               R+ +L+P    G    +    +  +  PV+ +   S +R E   S     R R F 
Sbjct: 69  DLGGRSISLRPEGTAGVARAYVQSGELSKAKPVKYSYVSSCFRYEKPQS----GRQRMFH 124

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST---RPEKRVGSDALWDDA 444
           Q     F +KE   +   ++  L      + G ++I +K+++      +    +AL    
Sbjct: 125 QLGIECFGSKEVQADA--EVIMLASDFLNNIGLKEITLKINSIGCNKCREKYKEALVKYY 182

Query: 445 ENIMKGVLDTIKNSSQDR----INTGVLL----------------GEGAFYGPKFEYILK 484
           E++ + + +T K          ++                      E A    K + +L 
Sbjct: 183 ESVSENLCETCKIRLNTNPMRLLDCKEDECTKYSSDAPSILDFICSECANDFSKLQELLT 242

Query: 485 DAIGRDWQCGTI--QVDFNLPSRFNAFYVN------------SHSEKCHPVMIHRAVFG- 529
           DA  +      I   +D+   + F   + N              +       I     G 
Sbjct: 243 DAGIQYEVDPRIVRGLDYYNKTAFEFIHENIGAKATVCGGGRYDNLINTLAGIEEPGIGF 302

Query: 530 --SIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR 587
              +ER + + I++   +  +  SP   I+    +   E    IA +L++   ++  D  
Sbjct: 303 GIGLERLM-LAIDSENIDKSISTSPEYVIIPAGENVPYEKIYAIAKMLRNSGKTVVVDIM 361

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           N      I+  +       +I G+ E    ++ ++   S   + V + + +   ++E++
Sbjct: 362 NRNFKSLIKYANKINAKYALILGEDELKNEAVTVKNMASGDQKTVKISELVN--SQETI 418


>gi|256371008|ref|YP_003108832.1| seryl-tRNA synthetase [Acidimicrobium ferrooxidans DSM 10331]
 gi|256007592|gb|ACU53159.1| seryl-tRNA synthetase [Acidimicrobium ferrooxidans DSM 10331]
          Length = 438

 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 67/192 (34%), Gaps = 15/192 (7%)

Query: 238 LEESEKRDHRKLAREMDL----FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEE 293
                +  H ++ RE+ +          GS    +   G ++ + L ++      + +EE
Sbjct: 144 TPSHRRVPHFEIGRELGILDLERAAKLSGSMFALYRNLGARLVRALTNFALDAHAEAFEE 203

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           I+ P ++ +     +GH   +  + + +        +       P       +++   + 
Sbjct: 204 IHPPTLVRRETMVATGHLPKFADDAYVM--------ERDDLYAIPTAEVPLTSLYRDEIL 255

Query: 354 SYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
               LP+RL      YR E   +     GL+R+  F + +       E   +  L++   
Sbjct: 256 DLAMLPMRLTAATPCYRREAGSAGRDTRGLLRLHEFDKVEILALVAPEDATSMHLELLGR 315

Query: 411 IISIYKDFGFEK 422
             ++ +  G   
Sbjct: 316 AEALLQRLGLIY 327


>gi|169856615|ref|XP_001834964.1| glycine-tRNA ligase [Coprinopsis cinerea okayama7#130]
 gi|116503951|gb|EAU86846.1| glycine-tRNA ligase [Coprinopsis cinerea okayama7#130]
          Length = 653

 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 39/107 (36%), Gaps = 2/107 (1%)

Query: 539 IENFKGNLPLWLSPIQAIVTTIT--SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           IE    +LP  ++P + ++  ++         QEI   L+   +    D  N +I  +  
Sbjct: 522 IERGVLSLPPLVAPTKVLIVPLSAREEFDPLVQEITAKLRKAGVFSRVDDSNTSIGKRYA 581

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +     P  +         R++ IR   +   +   + + +  +T 
Sbjct: 582 RNDELGTPYGLTIDFASVQNRTVTIRERDTMDQRIGKIDEVVATVTD 628



 Score = 47.5 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 58/167 (34%), Gaps = 19/167 (11%)

Query: 335 ALKPMNCPGHVAVFNHGLKSYRE--LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
            L+P    GH   F + L  Y    +P   A+ G  +RNE S    GL+RVR FT  +  
Sbjct: 216 YLRPETAQGHFLNF-NRLLEYNNGRVPFASAQVGRSFRNEISPR-AGLLRVREFTMAEVE 273

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
            +   +   +   K    +    +    +K   +  +   K++      D      + + 
Sbjct: 274 HYVDPDDKSHPSFKDVRHV----EIVALDKHTQEAGSSETKKITVGEAVDKGIIANETLG 329

Query: 453 DTIKNSSQDRINTGVLLGE-----------GAFYGPKFEYILKDAIG 488
             I    Q  IN G+                 +    ++  ++++ G
Sbjct: 330 YFIARIYQYLINIGIDPARLRFRQHMGNEMAHYATDCWDAEIQNSYG 376


>gi|119357562|ref|YP_912206.1| seryl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266]
 gi|166228638|sp|A1BHA5|SYS_CHLPD RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|119354911|gb|ABL65782.1| seryl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266]
          Length = 431

 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/221 (15%), Positives = 73/221 (33%), Gaps = 21/221 (9%)

Query: 244 RDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRRKI--KDDYEEINTP 297
           ++H +L R + +          G+G   +  KG ++ + LI++M         + E+  P
Sbjct: 142 KNHLELGRSLGILDFERGAKISGAGFPVYIGKGARLERALINFMLDYHTDHHGFTEVFPP 201

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
             ++Q   + +G W  +   ++ +        +       P        +  + +     
Sbjct: 202 FFVNQESLRGTGQWPKFADQVYHI--------EEDNLYAIPTAEVPVTNLHRNEMIDAER 253

Query: 358 LPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           LPV    + + +R E         G +RV  F + +   F   E+ + E  KI     +I
Sbjct: 254 LPVSYVAYSACFRREAGSYGKDTRGFLRVHQFNKVEMVKFTRPEESYQELEKILMSAEAI 313

Query: 415 YKDFGFEKI----MVKLSTRPEKRVGSDALWDDAENIMKGV 451
            +                +    +     +W  AE      
Sbjct: 314 LQALMIPYRVLLLCSGDISANATKCYDIEVWSPAEEKYLEA 354


>gi|315174090|gb|EFU18107.1| seryl-tRNA synthetase [Enterococcus faecalis TX1346]
          Length = 423

 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/223 (16%), Positives = 86/223 (38%), Gaps = 21/223 (9%)

Query: 242 EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEIN 295
           E + H ++   + +          GS  +++   G ++ + + ++M  +  +   Y E+ 
Sbjct: 136 EPKPHWEIGEALGILDFERGAKVSGSRFLYYKGLGARLERAVYNFMLDQHVNEHGYTEVI 195

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
            P +++      +G +  ++ ++F V  +D T+         P         +N+ +   
Sbjct: 196 PPYLVNSKAMFGTGQFPKFKEDVFQVAESDLTLI--------PTAEVPLTNYYNNEILDA 247

Query: 356 RELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
           +ELP+        +R+E   +     GL+R+  F + +   F   E  + E  K+ N   
Sbjct: 248 QELPIYFTALSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFSDAEHSYEELEKMTNNAG 307

Query: 413 SIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
            I +  G    ++ LST              +W  A+   + +
Sbjct: 308 DILEKLGLPYRVITLSTGDMGFSAAKTYDLEVWIPAQKTYREI 350


>gi|295692848|ref|YP_003601458.1| histidyl-tRNA synthetase [Lactobacillus crispatus ST1]
 gi|295030954|emb|CBL50433.1| Histidyl-tRNA synthetase [Lactobacillus crispatus ST1]
          Length = 428

 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 63/405 (15%), Positives = 122/405 (30%), Gaps = 51/405 (12%)

Query: 276 FQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           +Q +    R      +Y EI TP       ++         + +   +  D   K  R  
Sbjct: 20  WQKVEETARNFFNRANYREIRTP---SFENYEIFARSSGDSSEIVEKQMYDFDDKGGRHI 76

Query: 335 ALKPMNCPGHVAVF--NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
           AL+P    G V  +  +         P  +    S +R E   +     R R F Q    
Sbjct: 77  ALRPEGTAGVVRAYVEDKMYAPEVVKPFNVFYMESTFRYERPQA----GRQREFHQIGVE 132

Query: 393 VFCTKEQMFNECLKIHNL----------IISIYKDFGFEKIMVKLSTRPEKRVG--SDAL 440
            F +   + +    +                     G E++                D L
Sbjct: 133 SFGSSNPLSDVQTIMMGHDLLGELGVKNYQLHINTLGNEQVRQDYHDALVNYFTPLKDEL 192

Query: 441 WDDAENIMKG----VLDTIKNSSQDRINTGVLLGEGAFYGPK--------------FEYI 482
            +D++  ++     +LD+     +  +     + E      K               +Y+
Sbjct: 193 SEDSQRRLRDNPLRILDSKDERDKKFLPKAPKIREFLDDDSKANFEAILKMLDQLGIDYV 252

Query: 483 LKDAI--GRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIH--------RAVFGSIE 532
           + D +  G D+  G I                      +  ++            FG  E
Sbjct: 253 IDDDLVRGLDYYTGIIFEFMVKDKSLWESATTILGGGRYDHLVEEFNGPATPAVGFGIGE 312

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
             + +++E     L      I   +T I     + A EIA  L++     + D   + + 
Sbjct: 313 ERLMLVLEKQNPAL-FEKRGIDFFITNIGDGTAQKAIEIARSLRNQGFEADFDVNQKKLK 371

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
            + ++   +    +I  G+KE +   + I+R     T  +SL D 
Sbjct: 372 NQFKKADREGAKYVITLGEKELANGVLNIKRLADGKTIDLSLEDL 416


>gi|295398161|ref|ZP_06808210.1| serine--tRNA ligase [Aerococcus viridans ATCC 11563]
 gi|294973680|gb|EFG49458.1| serine--tRNA ligase [Aerococcus viridans ATCC 11563]
          Length = 435

 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/243 (15%), Positives = 92/243 (37%), Gaps = 19/243 (7%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIF 276
           G   +   E+ ++    E   + + H ++   + +          G+  +++   G ++ 
Sbjct: 115 GADEDDNVEVRRWSQAPEFDFQPKAHYEIGEALGILDFERGAKVSGARFLYYRGLGARLE 174

Query: 277 QTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFA 335
           + + ++M  +  ++ YEEI  P +++++    +G +  +  ++F       T  + R   
Sbjct: 175 RAVYNFMLDQHQEEGYEEIIPPYLVNENAMYGTGQFPKFTEDVF------STTNEDRHLT 228

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAH 392
           L P         F + +     LP+        +R+E   +     GL+R+  F + +  
Sbjct: 229 LIPTAEVPLTNYFANEIIPGENLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFQKVEMV 288

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIM 448
            F   E  ++E  K+     +I +       ++ LST              +W  A+   
Sbjct: 289 KFARPEDSYDELEKMVANAENILQKLNLPYRVMTLSTGDMGFSAAKTYDLEVWVPAQETY 348

Query: 449 KGV 451
           + +
Sbjct: 349 REI 351


>gi|258515483|ref|YP_003191705.1| alanyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
 gi|257779188|gb|ACV63082.1| alanyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
          Length = 878

 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 47/195 (24%), Positives = 86/195 (44%), Gaps = 12/195 (6%)

Query: 12  GSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIEIITPEDPRSLA 71
           G + +F V  +G D+   IS+ +      +   GKV      V + +++I    + R   
Sbjct: 503 GQVTDFAV-LSGQDLNVMISQVIKPVENLIVHKGKVESGLLQVND-TVKIEVAGERRLSI 560

Query: 72  VIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEII 130
              HS  H++ +A++ +  E     G ++E D   +DF      S++EL +IEK +   I
Sbjct: 561 ARNHSATHLLHKALKEVLGEHVNQAGSLVEPDRLRFDFTHYAAVSNEELNKIEKIVNRTI 620

Query: 131 ARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVR 189
             + P      S  KARE+  +     K          + V + + GE+  +LC G H+ 
Sbjct: 621 LSNLPVTVSESSLSKAREMGAAALFGEKY--------GDLVRVVKMGEFSLELCGGTHIH 672

Query: 190 STGQVKKFFKLMKVA 204
           ST ++  F  + + +
Sbjct: 673 STAEIGLFKLISESS 687


>gi|219685484|ref|ZP_03540302.1| glycine--tRNA ligase [Borrelia garinii Far04]
 gi|219673040|gb|EED30061.1| glycine--tRNA ligase [Borrelia garinii Far04]
          Length = 445

 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 63/432 (14%), Positives = 126/432 (29%), Gaps = 70/432 (16%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKDDYEEIN---TPQVLDQHLWQQSGHWDSYRANMF 319
           SG   +   G ++ + + S   + +   +E I    +   +   +W+ SGH D +  +M 
Sbjct: 28  SGAWDYGPLGVELKKNIKSEWWKSMVYLHENIVGLDSAIFMRPEIWRASGHIDGFSDSMV 87

Query: 320 AVKCADDTIKDL--------------------------------------RTFALKPMNC 341
             K      +                                            L+P   
Sbjct: 88  DCKDCKSRFRADFVDLSKNCPNCKVGNNFTSPRSFNLMFKTHIGVVEDSSHEIYLRPETA 147

Query: 342 PGHVAVFNHGLKSYR-ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQ 399
            G    F + L S R ++P  +A+ G  +RNE   + + + R   F Q +   F    + 
Sbjct: 148 QGIFVNFRNVLDSSRLKIPFGIAQVGKAFRNEIV-TKNFIFRTCEFEQMEMQFFVHPKQI 206

Query: 400 MFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSS 459
               C    N +    +        ++       ++   A         K   D      
Sbjct: 207 DEWFCYWQQNRMNFFIETLKIRPDKLRFKAHDSTQLAHYA---------KSAFDI----- 252

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
           +     G    EG      ++         + +      D     R+    + + +    
Sbjct: 253 EYEFPFGFQEVEGIHNRGNYDLTQHSKFSNNPKIFEYH-DLLTKERYVPHVIETSAGLTR 311

Query: 520 PVMIHRAVFGSIERFIGIMIENFK---GNLPLWLSPIQAIVTTITSSA--VEYAQEIANL 574
            V++      S E     + +  K     L   L+P +  +  +      VE A+ I   
Sbjct: 312 SVLMILCNAYSEEE----LSDGDKRIVLRLHPKLAPYKIAIFPLVKKVELVEIARRIYME 367

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           L      I  D    TI  + R       P  +        + ++ +R   + T +++ +
Sbjct: 368 LCD-DFHIFYDDSG-TIGKRYRRQDEIGTPYCVTVDYNTIEDETVTVRERNNMTQKRIFI 425

Query: 635 LDAIPILTKESL 646
            D    +  E L
Sbjct: 426 NDLYSYIKTEIL 437


>gi|297616960|ref|YP_003702119.1| histidyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
 gi|297144797|gb|ADI01554.1| histidyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
          Length = 421

 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 50/112 (44%), Gaps = 2/112 (1%)

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           ER +  + E   G LP++   I+  +          A +    L+   L  + D+   ++
Sbjct: 308 ERLLSGVEE--AGALPVFSPDIEVYIAVTGREYEASADQALRELRRAGLKADRDYMGRSL 365

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             ++R+    ++P++++ G+ EA+  +  IRR  +    ++   D I  + K
Sbjct: 366 KAQMRQADRLQVPVVVLIGEDEATRGTYTIRRMQTKEQYEIGQADLIDEVRK 417


>gi|239623766|ref|ZP_04666797.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239521797|gb|EEQ61663.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 887

 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/144 (18%), Positives = 63/144 (43%), Gaps = 10/144 (6%)

Query: 56  EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPF 114
           + S+ +      R+L    HS  H++ +A++ +  +     G  ++ G   +DF      
Sbjct: 555 DDSVTLSVCGKNRALICKNHSATHLLQKALRLVLGDHVEQAGSYVDAGRLRFDFTHFSAM 614

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
           + +E+ ++E  + + I    P + + ++ E+A++         K          ++V + 
Sbjct: 615 TPEEIKKVEALVNKEIQASLPVVTEIMTLEEAKKTGAMALFGEKY--------GDSVRVV 666

Query: 175 RQGEW-FDLCRGPHVRSTGQVKKF 197
             G++  +LC G HV +T  +  F
Sbjct: 667 EMGDFSTELCGGTHVANTNNIASF 690


>gi|170290849|ref|YP_001737665.1| glycyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum OPF8]
 gi|170174929|gb|ACB07982.1| glycyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum OPF8]
          Length = 508

 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 57/359 (15%), Positives = 110/359 (30%), Gaps = 28/359 (7%)

Query: 311 WDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR-ELPVRLAEFGSVY 369
           W   R        A          AL+P    G V  F       R +LP  L + G V+
Sbjct: 141 WGDLRNFNLMFTLAVGAEASEPNAALRPETTQGSVVEFRKTFTVMRGKLPFALGQVGRVF 200

Query: 370 RNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF--------GFE 421
           RNE S     L+R+R F Q +  +F   E       +     +     F        G  
Sbjct: 201 RNEISPR-RALIRMREFQQLEVQIFFDPENPDELYREKLEPFLDYKLRFLRREDRESGRI 259

Query: 422 KIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP---K 478
             +            +  +        +   +T+    +      ++ GE A Y      
Sbjct: 260 VEIPAREALMSGYTVNSLITYWLVAYQRFFNETLGFPLERLRYRELVEGEKAHYSLVHWD 319

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN-----SHSEKCHPVMIHRAVFGSIER 533
            E   +D    +      + D++L        ++       S++     ++    G    
Sbjct: 320 LEVYTEDLGWIELVNNAYRTDYDLSGHMRVSGIDLRIAIPESDRKLLPHMYEPSIGVDRV 379

Query: 534 FIGIMI-------ENFKGNLPLWLSPIQAIVTTI--TSSAVEYAQEIANLLKSHHLSIET 584
            +  ++       E     LP  ++PI+  V  +         A+EI + L +  +    
Sbjct: 380 ILHELMLAYREDEERVWLQLPRSIAPIEVGVFPLLKRDELPSKAREIYHELINEGIIAFY 439

Query: 585 DFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           D    TI  + R       P+ +    +   + ++ +R   +    +V   +    + K
Sbjct: 440 DDSG-TIGRRYRRMDEIGTPLCVTIDYQTLEDDTVTLRDRDTMMQVRVRREELPTKVRK 497



 Score = 38.6 bits (88), Expect = 3.2,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 34/74 (45%), Gaps = 2/74 (2%)

Query: 258 IAEDGSGVIFWHRKGWKIFQTLISYMRRK--IKDDYEEINTPQVLDQHLWQQSGHWDSYR 315
            ++  +G   +   G ++ + +I   RR+  IK+   EI TP VL   +++ SGH + + 
Sbjct: 26  YSDAPAGFYTYGPLGVRMKEKIIGLWRREIVIKEGVNEIETPNVLPIKVFEASGHLEHFF 85

Query: 316 ANMFAVKCADDTIK 329
             +   +      +
Sbjct: 86  DKLIECRRCHSKFR 99


>gi|21673441|ref|NP_661506.1| seryl-tRNA synthetase [Chlorobium tepidum TLS]
 gi|30173171|sp|Q8KES6|SYS_CHLTE RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|21646543|gb|AAM71848.1| seryl-tRNA synthetase [Chlorobium tepidum TLS]
          Length = 427

 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/221 (15%), Positives = 75/221 (33%), Gaps = 21/221 (9%)

Query: 244 RDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEINTP 297
           ++H +L + + +          G+G   +  KG ++ + LI++M         Y E+  P
Sbjct: 142 KNHLELGKSLGILDFERGAKISGAGFPVYTGKGARLERALINFMLDTHSANHGYTEVFPP 201

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +++Q   + +G W  +   ++ +                P        +    +    +
Sbjct: 202 FMVNQESLRGTGQWPKFADQVYHM--------PEDGLYAIPTAEVPVTNLHRGEILDADK 253

Query: 358 LPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           LP+  A + + +R E         G +RV  F + +   F   E  +    +I     +I
Sbjct: 254 LPIAYAAYSACFRREAGSYGKDTRGFLRVHQFNKVEMVRFTRPEASYEALEEILGHAEAI 313

Query: 415 YKDFGFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGV 451
                    ++ L +        +     +W  AEN     
Sbjct: 314 LVALKIPYRVITLCSGDISANAAKCYDIEVWSPAENKYLEA 354


>gi|296422831|ref|XP_002840962.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295637189|emb|CAZ85153.1| unnamed protein product [Tuber melanosporum]
          Length = 236

 Score = 69.0 bits (167), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 19/117 (16%), Positives = 43/117 (36%), Gaps = 11/117 (9%)

Query: 537 IMIENFKGNLPLWLSPIQAIVTT------ITSSAVEY----AQEIANLLKSHHLSIETDF 586
           I  +N    LP  ++  Q ++         T    +      ++IA  L    + ++ D 
Sbjct: 2   IHGDNKGLVLPPRVAQYQVVIVPCGLTAKTTEEERKRLLGGVEDIATTLSQAGIRVKADT 61

Query: 587 RN-ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           R   +  YK  +  +K +P+ +  G K+  ++ +   R  +     + L      + 
Sbjct: 62  RETYSPGYKFNDWELKGVPVRLEFGPKDMEKKQVLSARRDTGVKVGIPLSGLAEKVQ 118


>gi|229547035|ref|ZP_04435760.1| seryl-tRNA synthetase [Enterococcus faecalis TX1322]
 gi|256855074|ref|ZP_05560435.1| seryl-tRNA synthetase [Enterococcus faecalis T8]
 gi|307291565|ref|ZP_07571441.1| seryl-tRNA synthetase [Enterococcus faecalis TX0411]
 gi|229307963|gb|EEN73950.1| seryl-tRNA synthetase [Enterococcus faecalis TX1322]
 gi|256709587|gb|EEU24634.1| seryl-tRNA synthetase [Enterococcus faecalis T8]
 gi|306497326|gb|EFM66867.1| seryl-tRNA synthetase [Enterococcus faecalis TX0411]
 gi|315028722|gb|EFT40654.1| seryl-tRNA synthetase [Enterococcus faecalis TX4000]
          Length = 423

 Score = 69.0 bits (167), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 37/223 (16%), Positives = 86/223 (38%), Gaps = 21/223 (9%)

Query: 242 EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEIN 295
           E + H ++   + +          GS  +++   G ++ + + ++M  +  +   Y E+ 
Sbjct: 136 EPKPHWEIGEALGILDFERGAKVSGSRFLYYKGLGARLERAVYNFMLDQHVNEHGYTEVI 195

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
            P +++      +G +  ++ ++F V  +D T+         P         +N+ +   
Sbjct: 196 PPYLVNSKAMFGTGQFPKFKEDVFQVAESDLTLI--------PTAEVPLTNYYNNEILDA 247

Query: 356 RELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
           +ELP+        +R+E   +     GL+R+  F + +   F   E  + E  K+ N   
Sbjct: 248 QELPIYFTALSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFSDAEHSYEELEKMTNNAG 307

Query: 413 SIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
            I +  G    ++ LST              +W  A+   + +
Sbjct: 308 DILEKLGLPYRVITLSTGDMGFSAAKTYDLEVWIPAQKTYREI 350


>gi|21228163|ref|NP_634085.1| histidyl-tRNA synthetase [Methanosarcina mazei Go1]
 gi|32130120|sp|Q8PVB0|SYH_METMA RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|20906611|gb|AAM31757.1| Histidyl-tRNA synthetase [Methanosarcina mazei Go1]
          Length = 411

 Score = 69.0 bits (167), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 76/412 (18%), Positives = 136/412 (33%), Gaps = 51/412 (12%)

Query: 268 WHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADD 326
           +        + + S MR  + +  Y EI TP      L+                +  + 
Sbjct: 12  FLPADTARRRYVESVMRNVVLNWGYSEIITPTFEHLDLFTLKS------GEGIIGELYNF 65

Query: 327 TIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
           T K  R   L+P      +  + + L+ + + P++L  F + +R E         R R F
Sbjct: 66  TDKGGREMTLRPELTAPVMRFYVNELQPFPK-PLKLFYFENCFRYERPQK----GRFREF 120

Query: 387 TQD------------DAHVFCTKEQMFNEC-----LKIHNLIISIYKDFGFEKIMVKLST 429
            Q             DA V      +         +K+ NL +      G E  +V    
Sbjct: 121 WQFGVELIGSGKSDSDAEVIALASALLKAVGIKGDMKLGNLAVIRTLLKGLEPEIVSNVM 180

Query: 430 R---PEKRVGSDALWDD--AENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP---KFEY 481
           R    ++  G +AL D+  AE  +K  L  + +     I   V    G    P    FE 
Sbjct: 181 RLVDKKEYAGLEALLDEIGAEEQLKSDLFRLIHLQGRYILPEVKGIVGN--IPELVSFEK 238

Query: 482 ILK--DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF----- 534
            LK  DA G D+                 F V +        +     +  I+ F     
Sbjct: 239 TLKLLDAYGVDYSLDFGIARGLDYYTGMVFEVYAEGLGAQKQVCGGGSYQLIQLFGGGDV 298

Query: 535 ----IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
                GI  +      PL     +++V          A ++A  L+++   ++ D     
Sbjct: 299 PSTGFGIGFDRIMEICPLVPPAQKSLVVVSKPDTHLEAVKVATELRNYLP-VQIDLMERN 357

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
              ++   +      +II G+KE     + +R   S   + ++L + I  ++
Sbjct: 358 FKAQLSYANTINADYVIIVGEKELEAGKLTLRDMVSGEQELLTLEEIIEKIS 409


>gi|229550614|ref|ZP_04439339.1| seryl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
 gi|255971641|ref|ZP_05422227.1| seryl-tRNA synthetase [Enterococcus faecalis T1]
 gi|255974606|ref|ZP_05425192.1| seryl-tRNA synthetase [Enterococcus faecalis T2]
 gi|256956923|ref|ZP_05561094.1| seryl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|256960726|ref|ZP_05564897.1| seryl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|257078596|ref|ZP_05572957.1| seryl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|257081438|ref|ZP_05575799.1| seryl-tRNA synthetase [Enterococcus faecalis E1Sol]
 gi|257421433|ref|ZP_05598423.1| seryl-tRNA synthetase [Enterococcus faecalis X98]
 gi|293384900|ref|ZP_06630738.1| serine--tRNA ligase [Enterococcus faecalis R712]
 gi|293388590|ref|ZP_06633091.1| serine--tRNA ligase [Enterococcus faecalis S613]
 gi|294781552|ref|ZP_06746890.1| serine--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|307269018|ref|ZP_07550381.1| seryl-tRNA synthetase [Enterococcus faecalis TX4248]
 gi|307278221|ref|ZP_07559302.1| seryl-tRNA synthetase [Enterococcus faecalis TX0860]
 gi|312901191|ref|ZP_07760476.1| seryl-tRNA synthetase [Enterococcus faecalis TX0470]
 gi|312908712|ref|ZP_07767652.1| seryl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
 gi|312979173|ref|ZP_07790879.1| seryl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
 gi|229304333|gb|EEN70329.1| seryl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
 gi|255962659|gb|EET95135.1| seryl-tRNA synthetase [Enterococcus faecalis T1]
 gi|255967478|gb|EET98100.1| seryl-tRNA synthetase [Enterococcus faecalis T2]
 gi|256947419|gb|EEU64051.1| seryl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|256951222|gb|EEU67854.1| seryl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|256986626|gb|EEU73928.1| seryl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|256989468|gb|EEU76770.1| seryl-tRNA synthetase [Enterococcus faecalis E1Sol]
 gi|257163257|gb|EEU93217.1| seryl-tRNA synthetase [Enterococcus faecalis X98]
 gi|291077818|gb|EFE15182.1| serine--tRNA ligase [Enterococcus faecalis R712]
 gi|291082048|gb|EFE19011.1| serine--tRNA ligase [Enterococcus faecalis S613]
 gi|294451409|gb|EFG19873.1| serine--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|306505096|gb|EFM74285.1| seryl-tRNA synthetase [Enterococcus faecalis TX0860]
 gi|306514687|gb|EFM83239.1| seryl-tRNA synthetase [Enterococcus faecalis TX4248]
 gi|310625311|gb|EFQ08594.1| seryl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
 gi|311288045|gb|EFQ66601.1| seryl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
 gi|311291710|gb|EFQ70266.1| seryl-tRNA synthetase [Enterococcus faecalis TX0470]
 gi|315031222|gb|EFT43154.1| seryl-tRNA synthetase [Enterococcus faecalis TX0017]
 gi|315036450|gb|EFT48382.1| seryl-tRNA synthetase [Enterococcus faecalis TX0027]
 gi|315147058|gb|EFT91074.1| seryl-tRNA synthetase [Enterococcus faecalis TX4244]
 gi|315156336|gb|EFU00353.1| seryl-tRNA synthetase [Enterococcus faecalis TX0043]
 gi|315158469|gb|EFU02486.1| seryl-tRNA synthetase [Enterococcus faecalis TX0312]
 gi|315168211|gb|EFU12228.1| seryl-tRNA synthetase [Enterococcus faecalis TX1341]
 gi|323479332|gb|ADX78771.1| seryl-tRNA synthetase [Enterococcus faecalis 62]
 gi|327533948|gb|AEA92782.1| serine--tRNA ligase [Enterococcus faecalis OG1RF]
 gi|329577577|gb|EGG59011.1| serine--tRNA ligase [Enterococcus faecalis TX1467]
          Length = 423

 Score = 69.0 bits (167), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 37/223 (16%), Positives = 86/223 (38%), Gaps = 21/223 (9%)

Query: 242 EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEIN 295
           E + H ++   + +          GS  +++   G ++ + + ++M  +  +   Y E+ 
Sbjct: 136 EPKPHWEIGEALGILDFERGAKVSGSRFLYYKGLGARLERAVYNFMLDQHVNEHGYTEVI 195

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
            P +++      +G +  ++ ++F V  +D T+         P         +N+ +   
Sbjct: 196 PPYLVNSKAMFGTGQFPKFKEDVFQVAESDLTLI--------PTAEVPLTNYYNNEILDA 247

Query: 356 RELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
           +ELP+        +R+E   +     GL+R+  F + +   F   E  + E  K+ N   
Sbjct: 248 QELPIYFTALSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFSDAEHSYEELEKMTNNAG 307

Query: 413 SIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
            I +  G    ++ LST              +W  A+   + +
Sbjct: 308 DILEKLGLPYRVITLSTGDMGFSAAKTYDLEVWIPAQKTYREI 350


>gi|289803037|ref|ZP_06533666.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. AG3]
          Length = 105

 Score = 69.0 bits (167), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 19/101 (18%), Positives = 38/101 (37%), Gaps = 4/101 (3%)

Query: 547 PLWLSPIQAIVTTITS----SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
           P  ++P Q  +  +         E A+++ + L++  + +  D R E       +  +  
Sbjct: 1   PDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLMDDRKERPGVMFADMELIG 60

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           IP  I+ GD+      I  +   S     +   D +  L K
Sbjct: 61  IPHTIVIGDRNLDNDDIEYKYRRSGEKSLIKTGDIVDYLVK 101


>gi|225550730|ref|ZP_03771679.1| serine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
 gi|225379884|gb|EEH02246.1| serine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
          Length = 418

 Score = 69.0 bits (167), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 39/243 (16%), Positives = 82/243 (33%), Gaps = 21/243 (8%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAEDG----SGVIFWHRKGWKIF 276
           G   N   E+ +     +       H  LA +  L    +      S  I +   G +++
Sbjct: 116 GNDENDNVEIKKVFEPRKFDFSPLAHWDLAAKNKLIDFDKSTKITGSRFIIYTNFGARLY 175

Query: 277 QTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFA 335
           + L  + +   +K  + EI  P +++Q     SG+   +  ++F +        +   + 
Sbjct: 176 RALQQFCLDMNVKAGFNEIWAPVIVNQESLIGSGNLPKFADDLFKL--------ENSNYY 227

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAH 392
           L P        +  + +    +LP+        +R+E   +   + G++R   F + +  
Sbjct: 228 LSPTAEVQLTNLHRNEILKASDLPLYYTALTPCFRSEAGSAGRDVRGVIRQHQFHKVELV 287

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIM 448
             C  E  F E   +     SI +        + L T              +W  + N  
Sbjct: 288 KLCKPEDSFKELESMTRQAESILEALELPYRRIALCTGDLGFSSAKTYDLEVWLPSYNAY 347

Query: 449 KGV 451
           K +
Sbjct: 348 KEI 350


>gi|188524127|ref|ZP_03004200.1| seryl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str. ATCC
           33696]
 gi|195867376|ref|ZP_03079380.1| seryl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str. ATCC
           33175]
 gi|198273528|ref|ZP_03206064.1| seryl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str. ATCC
           27816]
 gi|195660003|gb|EDX53383.1| seryl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str. ATCC
           33696]
 gi|195660852|gb|EDX54105.1| seryl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str. ATCC
           33175]
 gi|198250048|gb|EDY74828.1| seryl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str. ATCC
           27816]
          Length = 418

 Score = 69.0 bits (167), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 39/243 (16%), Positives = 82/243 (33%), Gaps = 21/243 (8%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAEDG----SGVIFWHRKGWKIF 276
           G   N   E+ +     +       H  LA +  L    +      S  I +   G +++
Sbjct: 116 GNDENDNVEIKKVFEPRKFDFSPLAHWDLAAKNKLIDFDKSTKITGSRFIIYTNFGARLY 175

Query: 277 QTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFA 335
           + L  + +   +K  + EI  P +++Q     SG+   +  ++F +        +   + 
Sbjct: 176 RALQQFCLDMNVKAGFNEIWAPVIVNQESLIGSGNLPKFADDLFKL--------ENSNYY 227

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAH 392
           L P        +  + +    +LP+        +R+E   +   + G++R   F + +  
Sbjct: 228 LSPTAEVQLTNLHRNEILKASDLPLYYTALTPCFRSEAGSAGRDVRGVIRQHQFHKVELV 287

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIM 448
             C  E  F E   +     SI +        + L T              +W  + N  
Sbjct: 288 KLCKPEDSFKELESMTRQAESILEALELPYRRIALCTGDLGFSSAKTYDLEVWLPSYNAY 347

Query: 449 KGV 451
           K +
Sbjct: 348 KEI 350


>gi|171920715|ref|ZP_02931931.1| seryl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str. ATCC
           33698]
 gi|171903457|gb|EDT49746.1| seryl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str. ATCC
           33698]
          Length = 418

 Score = 69.0 bits (167), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 39/243 (16%), Positives = 82/243 (33%), Gaps = 21/243 (8%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAEDG----SGVIFWHRKGWKIF 276
           G   N   E+ +     +       H  LA +  L    +      S  I +   G +++
Sbjct: 116 GNDENDNVEIKKVFEPRKFDFSPLAHWDLAAKNKLIDFDKSTKITGSRFIIYTNFGARLY 175

Query: 277 QTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFA 335
           + L  + +   +K  + EI  P +++Q     SG+   +  ++F +        +   + 
Sbjct: 176 RALQQFCLDMNVKAGFNEIWAPVIVNQESLIGSGNLPKFADDLFKL--------ENSNYY 227

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAH 392
           L P        +  + +    +LP+        +R+E   +   + G++R   F + +  
Sbjct: 228 LSPTAEVQLTNLHRNEILKASDLPLYYTALTPCFRSEAGSAGRDVRGVIRQHQFHKVELV 287

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIM 448
             C  E  F E   +     SI +        + L T              +W  + N  
Sbjct: 288 KLCKPEDSFKELESMTRQAESILEALELPYRRIALCTGDLGFSSAKTYDLEVWLPSYNAY 347

Query: 449 KGV 451
           K +
Sbjct: 348 KEI 350


>gi|191638818|ref|YP_001987984.1| seryl-tRNA synthetase [Lactobacillus casei BL23]
 gi|238693001|sp|B3W8V7|SYS_LACCB RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|190713120|emb|CAQ67126.1| Seryl-tRNA synthetase (Seryl-tRNA(Ser/Sec) synthetase)
           (Serine--tRNA ligase) (SerRS) [Lactobacillus casei BL23]
 gi|327382865|gb|AEA54341.1| Seryl-tRNA synthetase [Lactobacillus casei LC2W]
 gi|327386050|gb|AEA57524.1| Seryl-tRNA synthetase [Lactobacillus casei BD-II]
          Length = 427

 Score = 69.0 bits (167), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 70/188 (37%), Gaps = 14/188 (7%)

Query: 272 GWKIFQTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G ++ + + ++ +    K+ YEEI  P +++      +G +  +    + +        D
Sbjct: 170 GARLERAVYNFFLDEHQKEGYEEIIPPYLVNNDSMFGTGQFPKFTDATYTIT------ND 223

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFT 387
                L P      V  + + +    +LPV        +R+E   +     GL+R+  F 
Sbjct: 224 GEPLTLIPTAEVPLVNYYRNDIVDAEKLPVNFTALTPAFRSEAGSAGRDTRGLIRMHQFN 283

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +   FC  E  + +   + +    + +  G    ++ L++              +W  
Sbjct: 284 KVEMVKFCKPEDSWKQLQNLIHDAEDLLQKLGLPYHVITLASNDASFTSAKTNDLEVWMP 343

Query: 444 AENIMKGV 451
           A++  + +
Sbjct: 344 AQDRYREI 351


>gi|294883812|ref|XP_002771081.1| prolyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
 gi|239874299|gb|EER02897.1| prolyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
          Length = 142

 Score = 68.7 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 19/138 (13%), Positives = 50/138 (36%), Gaps = 18/138 (13%)

Query: 514 HSEKCHPVMIHRAV-FGSIERFIGIMIENFKGNLPLWLSPIQAIVTTI------------ 560
              +     I   + FG I   + +  +N    +P  ++  Q ++  +            
Sbjct: 1   DGARKSAHSITWCIDFGVIGAMVMVHGDNRGLVVPPIVAETQVVIVPVPPSRGVGPTRWE 60

Query: 561 --TSSAVEYAQEIANLLKSHHLS-IETDFRNETINYKIREHSIKKIPIIIICGDKEASER 617
               +     +E+ ++L +     +  D R +   +K  +  ++ +P+ I  G +E    
Sbjct: 61  MEMDAIENECRELRDILLNDGARCVLDDDRKKRPGFKFTKWDLQGVPLSIRIGSREVETN 120

Query: 618 SIGI--RRFGSTTTQKVS 633
           ++ +  R  G    + +S
Sbjct: 121 TVTLAYRHTGEKVNEHLS 138


>gi|149928208|ref|ZP_01916453.1| seryl-tRNA synthetase [Limnobacter sp. MED105]
 gi|149823099|gb|EDM82339.1| seryl-tRNA synthetase [Limnobacter sp. MED105]
          Length = 429

 Score = 68.7 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 44/243 (18%), Positives = 89/243 (36%), Gaps = 14/243 (5%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDL-FHIAEDGSGVIFWHRKG--WKIFQ 277
           G +     EL ++    +   E +DH  L  ++ L F  A + SG  F   KG   K+ +
Sbjct: 114 GKSEEDNIELRRWGTPAQFDFEVKDHVDLGEKLGLDFETAANLSGSRFAVLKGQIAKLHR 173

Query: 278 TLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFA 335
            L  +M     +   Y E  TP ++     + +G    +  ++F+VK   +       + 
Sbjct: 174 ALAQFMLDTHTEQHGYTEHYTPYIVRGETLKGTGQLPKFADDLFSVKKGGEEGTSEPLYL 233

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAH 392
           + P        +    +    +LP+++      +R+E         GL+R   F + +  
Sbjct: 234 I-PTAEVTLTNLVADQILKASDLPIKMTAHSPCFRSEAGSYGRDTRGLIRQHQFDKVEMV 292

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE----KRVGSDALWDDAENIM 448
                E  +    ++     +I +  G    ++ L T        R     +W  A+N  
Sbjct: 293 RIENPENSYAALDEMTQHAENILQKLGLPYRVIVLCTGDMGFGSTRTHDIEVWLPAQNTY 352

Query: 449 KGV 451
           + +
Sbjct: 353 REI 355


>gi|325916030|ref|ZP_08178320.1| alanyl-tRNA synthetase [Xanthomonas vesicatoria ATCC 35937]
 gi|325537706|gb|EGD09412.1| alanyl-tRNA synthetase [Xanthomonas vesicatoria ATCC 35937]
          Length = 882

 Score = 68.7 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 34/164 (20%), Positives = 65/164 (39%), Gaps = 16/164 (9%)

Query: 42  AINGKVCDLSDPVREGSIEIIT------PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVA 95
              G+       + EG++ +            R   ++ HS  H++  A++ +       
Sbjct: 531 KFAGQFHGHVGRITEGALALGDVLAGGIDVQRRGKTILNHSATHLLHAALREVLGTHVQQ 590

Query: 96  IGP-IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            G  +  D   +DF   QP S++ELA IE+K+   +  +       ++ ++A +      
Sbjct: 591 KGSLVAPDRLRFDFSHFQPISAEELAVIERKVNAEVRTNHSVEVHNMAMQEALDFGAMAL 650

Query: 155 EAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
              K          E+V + + G +  +LC G HV  TG +  F
Sbjct: 651 FGEKY--------GEHVRVLKMGGYSTELCGGTHVSRTGDIGLF 686


>gi|312952534|ref|ZP_07771401.1| seryl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|310629532|gb|EFQ12815.1| seryl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|315153454|gb|EFT97470.1| seryl-tRNA synthetase [Enterococcus faecalis TX0031]
          Length = 423

 Score = 68.7 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 37/223 (16%), Positives = 86/223 (38%), Gaps = 21/223 (9%)

Query: 242 EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEIN 295
           E + H ++   + +          GS  +++   G ++ + + ++M  +  +   Y E+ 
Sbjct: 136 EPKPHWEIGEALGILDFERGAKVSGSRFLYYKDLGARLERAVYNFMLDQHVNEHGYTEVI 195

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
            P +++      +G +  ++ ++F V  +D T+         P         +N+ +   
Sbjct: 196 PPYLVNSKAMFGTGQFPKFKEDVFQVAESDLTLI--------PTAEVPLTNYYNNEILDA 247

Query: 356 RELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
           +ELP+        +R+E   +     GL+R+  F + +   F   E  + E  K+ N   
Sbjct: 248 QELPIYFTALSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFSDAEHSYEELEKMTNNAG 307

Query: 413 SIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
            I +  G    ++ LST              +W  A+   + +
Sbjct: 308 DILEKLGLPYRVITLSTGDMGFSAAKTYDLEVWIPAQKTYREI 350


>gi|119775498|ref|YP_928238.1| histidyl-tRNA synthetase [Shewanella amazonensis SB2B]
 gi|166228611|sp|A1S862|SYH_SHEAM RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|119767998|gb|ABM00569.1| histidyl-tRNA synthetase [Shewanella amazonensis SB2B]
          Length = 424

 Score = 68.7 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 71/433 (16%), Positives = 141/433 (32%), Gaps = 84/433 (19%)

Query: 269 HRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
                 ++Q L + +R  +    Y EI TP V    L+++S    +           D  
Sbjct: 15  LPNQSPVWQKLEAVLRDAVAAFGYSEIRTPIVESTDLFKRSIGEVTDIVEKEMYTFED-- 72

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
            ++  +  L+P      V   N     Y +   RL   G ++R+E         R R F 
Sbjct: 73  -RNGDSLTLRPEGTASTVRAGNEHGLLYNQ-EQRLWYTGPMFRHERPQK----GRYRQFH 126

Query: 388 QD--DAHVFCTKE---------QMFNECLKIHNLIISIYKDFGFEKIM--VKLSTRPEKR 434
           Q   + +   + +          M  + L +   ++      G        + +      
Sbjct: 127 QFGVEVYGIASADIDAEVLMLSNMLWQKLGLTEHVVLEINTLGDSDERAAYRDALIAFLE 186

Query: 435 VGSDALWDDAE----------------------------------------NIMKGVLDT 454
           V  D L +D++                                        + ++ +LD 
Sbjct: 187 VHKDKLDEDSQRRMYSNPLRVLDTKNPEIQAILADAPALMDYLGEESKSHFSTLRELLDA 246

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH 514
           +    Q R+N  ++ G   +    FE+ + D++G        Q       R++       
Sbjct: 247 VGI--QYRVNPRLVRGLDYYNRTVFEW-VTDSLG-------AQGTVLAGGRYDGLVGQLG 296

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANL 574
            +    V     +    ER + +++E  +    +  + +   VT +  S V  A  IAN 
Sbjct: 297 GKDTPAVGFAMGL----ERIV-LLLETLELAKDV-PAAVDVYVTAMGDSCVPAAFAIANE 350

Query: 575 LKSH--HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
           L+     + I T         +I+        + +I GD E +E  + I+   +   Q++
Sbjct: 351 LRVALPGVRIMTHCGGGNFKKQIKRADKSGAALALIIGDNELAEGKVAIKPLRNDNEQQL 410

Query: 633 ----SLLDAIPIL 641
               +L + I  L
Sbjct: 411 VAREALAETIKAL 423


>gi|291557844|emb|CBL34961.1| alanyl-tRNA synthetase [Eubacterium siraeum V10Sc8a]
          Length = 878

 Score = 68.7 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 28/144 (19%), Positives = 58/144 (40%), Gaps = 8/144 (5%)

Query: 55  REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIED-GFYYDFDKEQP 113
            + S++    E  R      H+CAH++  A++ +  +     G  ++     +DF     
Sbjct: 544 TDDSVKSAVDEKKRMATARNHTCAHLLQAALRKVLGDHVHQAGSFVDPYRCRFDFSHFSA 603

Query: 114 FSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTL 173
            + +EL +IE  + + I    P + + L  E+AR+         K   +  +    +V+ 
Sbjct: 604 VTPEELEKIEMLVNDWILSGIPVVTEELPIEEARKKGAMALFGEKYGDIVRVVQAGDVS- 662

Query: 174 YRQGEWFDLCRGPHVRSTGQVKKF 197
                  + C G H+ +T +   F
Sbjct: 663 ------TEFCGGTHLDNTAKAGLF 680


>gi|256964070|ref|ZP_05568241.1| seryl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|307274105|ref|ZP_07555314.1| seryl-tRNA synthetase [Enterococcus faecalis TX0855]
 gi|256954566|gb|EEU71198.1| seryl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|306509230|gb|EFM78291.1| seryl-tRNA synthetase [Enterococcus faecalis TX0855]
          Length = 423

 Score = 68.7 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 37/223 (16%), Positives = 87/223 (39%), Gaps = 21/223 (9%)

Query: 242 EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEIN 295
           E + H ++   + +          GS  +++   G ++ + + ++M  +  +   Y E+ 
Sbjct: 136 EPKPHWEIGEALGILDFERGAKVSGSRFLYYKGLGARLERAVYNFMLDQHVNEHGYTEVI 195

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
            P +++      +G +  ++ ++F V  +D T+         P         +N+ +   
Sbjct: 196 PPYLVNSKAMFGTGQFPKFKEDVFQVAESDLTLI--------PTAEVPLTNYYNNEILEA 247

Query: 356 RELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
           +ELP+        +R+E   +     GL+R+  F + +   F   E  + E  K+ N   
Sbjct: 248 QELPIYFTALSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFSDAEHSYEELEKMTNNAG 307

Query: 413 SIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
            I +  G    ++ LST              +W  A+ + + +
Sbjct: 308 DILEKLGLPYRVITLSTGDMGFSAAKTYDLEVWIPAQKMYREI 350


>gi|30018290|ref|NP_829921.1| seryl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|218233674|ref|YP_002364867.1| seryl-tRNA synthetase [Bacillus cereus B4264]
 gi|228918967|ref|ZP_04082348.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar huazhongensis
           BGSC 4BD1]
 gi|228956457|ref|ZP_04118255.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|229039921|ref|ZP_04189687.1| Seryl-tRNA synthetase [Bacillus cereus AH676]
 gi|229107702|ref|ZP_04237340.1| Seryl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|229125533|ref|ZP_04254567.1| Seryl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|229142822|ref|ZP_04271266.1| Seryl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|229148425|ref|ZP_04276683.1| Seryl-tRNA synthetase [Bacillus cereus m1550]
 gi|296500850|ref|YP_003662550.1| seryl-tRNA synthetase [Bacillus thuringiensis BMB171]
 gi|46577219|sp|Q81JC4|SYS_BACCR RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|226701388|sp|B7HII5|SYS_BACC4 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|29893830|gb|AAP07122.1| Seryl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|218161631|gb|ACK61623.1| serine--tRNA ligase [Bacillus cereus B4264]
 gi|228635034|gb|EEK91605.1| Seryl-tRNA synthetase [Bacillus cereus m1550]
 gi|228640636|gb|EEK97022.1| Seryl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|228657917|gb|EEL13721.1| Seryl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|228675742|gb|EEL30948.1| Seryl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|228727411|gb|EEL78602.1| Seryl-tRNA synthetase [Bacillus cereus AH676]
 gi|228803214|gb|EEM50034.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228840682|gb|EEM85942.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar huazhongensis
           BGSC 4BD1]
 gi|296321902|gb|ADH04830.1| seryl-tRNA synthetase [Bacillus thuringiensis BMB171]
          Length = 424

 Score = 68.7 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 40/225 (17%), Positives = 83/225 (36%), Gaps = 21/225 (9%)

Query: 240 ESEKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEE 293
             E + H  LA ++ +          GS  +F+   G ++ + LIS+M     D   YEE
Sbjct: 134 TYEPKPHWDLATDLGILDFERAGKVTGSRFVFYKGAGARLERALISFMLDLHTDEHGYEE 193

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           +  P ++++     +G    +  + F +        +   + L P        +    + 
Sbjct: 194 VLPPYMVNRASMTGTGQLPKFEEDAFRI--------ESEDYFLIPTAEVPVTNMHRDEIL 245

Query: 354 SYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
           +  +LP+R A F S +R+E   +     GL+R   F + +   F   E  + E  K+ N 
Sbjct: 246 NKEQLPIRYAAFSSCFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYEELEKLTND 305

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENIMKGV 451
              + +       ++ + T              +W  +    + +
Sbjct: 306 AERVLQLLELPYRVMSMCTGDLGFTAAKKYDIEVWIPSYGTYREI 350


>gi|257087920|ref|ZP_05582281.1| seryl-tRNA synthetase [Enterococcus faecalis D6]
 gi|256995950|gb|EEU83252.1| seryl-tRNA synthetase [Enterococcus faecalis D6]
          Length = 423

 Score = 68.7 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 37/223 (16%), Positives = 86/223 (38%), Gaps = 21/223 (9%)

Query: 242 EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEIN 295
           E + H ++   + +          GS  +++   G ++ + + ++M  +  +   Y E+ 
Sbjct: 136 EPKPHWEIGEALGILDFERGAKVSGSRFLYYKGLGARLERAVYNFMLDQHVNEHGYTEVI 195

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
            P +++      +G +  ++ ++F V  +D T+         P         +N+ +   
Sbjct: 196 PPYLVNSKAMFGTGQFPKFKEDVFQVAESDLTLI--------PTAEVPLTNYYNNEILDA 247

Query: 356 RELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
           +ELP+        +R+E   +     GL+R+  F + +   F   E  + E  K+ N   
Sbjct: 248 QELPIYFTALSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVRFSDAEHSYEELEKMTNNAG 307

Query: 413 SIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
            I +  G    ++ LST              +W  A+   + +
Sbjct: 308 DILEKLGLPYRVITLSTGDMGFSAAKTYDLEVWIPAQKTYREI 350


>gi|222446040|ref|ZP_03608555.1| hypothetical protein METSMIALI_01689 [Methanobrevibacter smithii
           DSM 2375]
 gi|222435605|gb|EEE42770.1| hypothetical protein METSMIALI_01689 [Methanobrevibacter smithii
           DSM 2375]
          Length = 564

 Score = 68.7 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 27/147 (18%), Positives = 50/147 (34%), Gaps = 11/147 (7%)

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG-------NLPLWLSPIQAIV- 557
           F         EK  P +I    FG       +++ +FK             ++P+Q  + 
Sbjct: 417 FEDVEEEISGEKIVPHVIE-PSFGIDRIVYSVLLHSFKETDAKDYFKFAPSVAPVQVGIY 475

Query: 558 -TTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASE 616
                    E A EI + L+     +E D    TI  +        IP+ I        +
Sbjct: 476 PLVNKEGPREIAIEITDKLRESGFKVEYDVSG-TIGKRYARADEIGIPLAITVDFDSLED 534

Query: 617 RSIGIRRFGSTTTQKVSLLDAIPILTK 643
             I +R   S   +++++ +    L +
Sbjct: 535 NKITVRNRDSEAQERIAIDEIKDYLEE 561



 Score = 46.3 bits (108), Expect = 0.018,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 2/71 (2%)

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYR-ELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
            K  +   ++P    G   +F    + +R +LP  + + G  YRNE S    G++R+R F
Sbjct: 150 AKGDKVGYMRPETAQGIFILFKRLERFFRGKLPFGVVQLGKAYRNEISPR-QGVIRLREF 208

Query: 387 TQDDAHVFCTK 397
           TQ +A +F   
Sbjct: 209 TQAEAEIFLNP 219



 Score = 39.4 bits (90), Expect = 2.0,   Method: Composition-based stats.
 Identities = 15/76 (19%), Positives = 32/76 (42%), Gaps = 2/76 (2%)

Query: 256 FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK--DDYEEINTPQVLDQHLWQQSGHWDS 313
           F I    SG   +   G  +   ++   R++    + + EI  P V+ + + + SGH D+
Sbjct: 20  FEIYSGVSGFTDYGPLGASLKNNIMQKWRKQYVSGEGFYEIEGPTVMPKEVLKASGHVDN 79

Query: 314 YRANMFAVKCADDTIK 329
           +   M   +   +  +
Sbjct: 80  FTDPMTKCEECGEVFR 95


>gi|327475188|gb|AEA77189.1| seryl-tRNA synthetase [Exiguobacterium sp. EPVM]
          Length = 427

 Score = 68.7 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 38/249 (15%), Positives = 90/249 (36%), Gaps = 25/249 (10%)

Query: 212 SNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRK 271
            +  +  R  GT    + EL Q+   +E+ +  D  +  +           S  +F+   
Sbjct: 118 EDDNVTIREVGTKPTFEFELKQHWDVMEDLKIVDVERAGKVTG--------SRFVFYKGL 169

Query: 272 GWKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
           G ++ + LI++M     D   Y E+  P ++++     +G    +  + F V   +    
Sbjct: 170 GARLERALINFMMDMHADEHGYSEVLPPYMVNRDAMTGTGQLPKFEEDAFKVADTN---- 225

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGF 386
               + L P        +    + +  +LP+    + + +R+E   +     GL+R   F
Sbjct: 226 ----YFLVPTAEVPVTNMHRDEIIAEDQLPITYTAYSACFRSEAGSAGRDTRGLIRQHQF 281

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALWD 442
            + +   F   E+ + +   +      + K  G    ++ + T              +W 
Sbjct: 282 NKVELVRFVKPEESYEQLELLTGHAEEVLKRLGLPYQVLSMCTADLGFTAAKKYDIEVWM 341

Query: 443 DAENIMKGV 451
            A+ + + +
Sbjct: 342 PAQGMYREI 350


>gi|205830103|sp|Q0BSD5|SYA_GRABC RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
          Length = 880

 Score = 68.7 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 33/148 (22%), Positives = 60/148 (40%), Gaps = 4/148 (2%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSD 117
           +E++     RS     HS  H++ EA++          G     D   +D  +  P + D
Sbjct: 549 VEVVVDHQRRSAIRAHHSATHLLHEALRRRLGTHVAQKGSLNAPDRLRFDVSQPTPITRD 608

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKAREL--FESKKEAYKVEILESIPAKENVTLYR 175
           +LA +E ++  +I ++SP   + ++ E+A          E Y  E+   +     V   +
Sbjct: 609 DLAVVEAEVNALIRQNSPVNTRLMTPEQAVAEGAMALFGEKYGDEV-RVVSMGAPVEEGK 667

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLMKV 203
                +LC G HV  TG +  F    + 
Sbjct: 668 PAYSIELCGGTHVGRTGDIGLFRITGES 695


>gi|114328034|ref|YP_745190.1| alanyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1]
 gi|114316208|gb|ABI62268.1| alanyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1]
          Length = 945

 Score = 68.7 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 33/148 (22%), Positives = 60/148 (40%), Gaps = 4/148 (2%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSD 117
           +E++     RS     HS  H++ EA++          G     D   +D  +  P + D
Sbjct: 614 VEVVVDHQRRSAIRAHHSATHLLHEALRRRLGTHVAQKGSLNAPDRLRFDVSQPTPITRD 673

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKAREL--FESKKEAYKVEILESIPAKENVTLYR 175
           +LA +E ++  +I ++SP   + ++ E+A          E Y  E+   +     V   +
Sbjct: 674 DLAVVEAEVNALIRQNSPVNTRLMTPEQAVAEGAMALFGEKYGDEV-RVVSMGAPVEEGK 732

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLMKV 203
                +LC G HV  TG +  F    + 
Sbjct: 733 PAYSIELCGGTHVGRTGDIGLFRITGES 760


>gi|95931408|ref|ZP_01314117.1| histidyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
 gi|95132545|gb|EAT14235.1| histidyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
          Length = 424

 Score = 68.7 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 73/420 (17%), Positives = 126/420 (30%), Gaps = 65/420 (15%)

Query: 269 HRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQS--GHWDSYRANMFAVKCAD 325
                  +Q L    RR       +EI  P V    L+ +S     D     M+      
Sbjct: 13  LPSEIATWQFLEDTARRIFATYGCQEIRVPVVEKTELFCRSIGETTDIVEKEMYTFNDKS 72

Query: 326 DTIKDLRTFALKP-MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVR 384
           D    LR     P M       +FN    S      +L   G ++R E         R R
Sbjct: 73  DNSLTLRPEGTAPVMRSFIQHKLFNQDQVS------KLYYLGPMFRYERPQK----GRYR 122

Query: 385 GFTQDDAHVFCTKEQ-MFNECLKIHNLIISIY---------KDFGFEKIMVKLSTRPEKR 434
            F Q  A +    +  M  + L + +                  G  K            
Sbjct: 123 QFHQIGAEIIGIDDPRMDAQVLAMLSHYFEAVGLTDVSLQINSLGCPKCRPDYRQTLIDF 182

Query: 435 VGS-------DALWDDAENIMKGVLDTIKNSSQDR-------INTGVLLGEGAFYGPKFE 480
           +         D     A N ++ VLD    S ++        ++      +  F   +  
Sbjct: 183 LQQRLDQLCPDCQRRYATNPLR-VLDCKSKSCKEATQDAPSVLDHLCDECDTHFATVQ-- 239

Query: 481 YILKDAIGRDWQCGTI---QVDFNLPSRFNAFYVN------------SHS---EKCHPVM 522
               + +G  +         +D+   + F     N                  E   P +
Sbjct: 240 -QCLNQLGTAYSINNRMVRGLDYYTKTTFEMVTNNLGAQNAVAAGGRYDGLVEELGGPSL 298

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSI 582
                   +ER + +++++ K   P    P    + T+   A E+A ++ + L+   +  
Sbjct: 299 PGIGFAMGVERLV-LLLQDKKIKTP----PPALFLATLGKDAEEFAFKVLHQLQREGIYA 353

Query: 583 ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           E DF   ++  ++R          I+ GD E SE S  ++R      Q V L   +  L 
Sbjct: 354 EMDFTGRSLKAQLRRADKLNCRYTIMIGDNELSEGSAQLKRMADGDQQAVQLSQLLEQLR 413


>gi|222445472|ref|ZP_03607987.1| hypothetical protein METSMIALI_01111 [Methanobrevibacter smithii
           DSM 2375]
 gi|222435037|gb|EEE42202.1| hypothetical protein METSMIALI_01111 [Methanobrevibacter smithii
           DSM 2375]
          Length = 431

 Score = 68.7 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 38/202 (18%), Positives = 69/202 (34%), Gaps = 17/202 (8%)

Query: 443 DAENIMKGVLDTIK--NSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDF 500
           DA N ++ ++DT+         +N GV  G   + G  FE  +     +   CG     +
Sbjct: 243 DALNELEELIDTLASFKMENYTLNLGVARGLDYYTGIVFEVYIPSLGAQKQVCGG--GTY 300

Query: 501 NLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTI 560
           +L   F    V           +        +R +  + E           PI   V  I
Sbjct: 301 SLIKIFGGEEV-----------VSTGFAFGFDRLMNAIEELATPEELP--CPIDIYVAPI 347

Query: 561 TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
           +      A EI   L+S  ++ + D   +     +   +  K+  + I G K+     I 
Sbjct: 348 SDDVRLKAYEITQTLRSAEIACDVDLNGKKFKKIMNHANKIKVKQVAIIGAKDLENNQIT 407

Query: 621 IRRFGSTTTQKVSLLDAIPILT 642
           I+   S   + V L + +  + 
Sbjct: 408 IKNMESGNQELVDLDNVVEYIK 429


>gi|13357663|ref|NP_077937.1| seryl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|170762301|ref|YP_001752189.1| seryl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC 27815]
 gi|183508823|ref|ZP_02958276.1| seryl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC
           33697]
 gi|186701768|ref|ZP_02971450.1| seryl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC 27818]
 gi|30173220|sp|Q9PR38|SYS_UREPA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|189083594|sp|B1AI95|SYS_UREP2 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|11271515|pir||D82932 seryl-tRNA synthetase UU106 [imported] - Ureaplasma urealyticum
 gi|6899062|gb|AAF30512.1|AE002111_1 seryl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|168827878|gb|ACA33140.1| seryl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC 27815]
 gi|182675788|gb|EDT87693.1| seryl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC
           33697]
 gi|186701042|gb|EDU19324.1| seryl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC 27818]
          Length = 418

 Score = 68.7 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 39/243 (16%), Positives = 82/243 (33%), Gaps = 21/243 (8%)

Query: 222 GTAWNTQQELTQYLYFLEESE-KRDHRKLAREMDLFHIAEDG----SGVIFWHRKGWKIF 276
           G   N   E+ +     +       H  LA +  L    +      S  I +   G +++
Sbjct: 116 GNDENDNVEIKKVFKPKKFDFLPLAHWDLAVKNKLIDFDKSTKITGSRFIIYTNFGARLY 175

Query: 277 QTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFA 335
           + L  + +   +K  + EI  P +++Q     SG+   +  ++F +        +   + 
Sbjct: 176 RALQQFCLDMNVKAGFSEIWAPVIVNQESLIGSGNLPKFADDLFKL--------ENSNYY 227

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAH 392
           L P        +  + +    +LP+        +R+E   +   + G++R   F + +  
Sbjct: 228 LSPTAEVQLTNLHRNEILKASDLPLYYTALTPCFRSEAGSAGRDVRGVIRQHQFHKVELV 287

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIM 448
             C  E  F E   +     SI +        + L T              +W  + N  
Sbjct: 288 KLCKPEDSFKELESMTRQAESILEALELPYRRIVLCTGDLGFSSAKTYDLEVWLPSYNAY 347

Query: 449 KGV 451
           K +
Sbjct: 348 KEI 350


>gi|329119631|ref|ZP_08248312.1| serine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
 gi|327464228|gb|EGF10532.1| serine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
          Length = 430

 Score = 68.7 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 40/220 (18%), Positives = 73/220 (33%), Gaps = 14/220 (6%)

Query: 244 RDHRKLAREMDL-FHIAEDGSGVIFWHRKG--WKIFQTLISYMRRKI--KDDYEEINTPQ 298
           +DH  L  ++ L F  A   SG  F   KG   ++ + L  +M      +  Y E  TP 
Sbjct: 139 KDHVDLGEKLGLDFETAAALSGARFSLMKGKIARLHRALAQFMLDTHTQRHGYTECYTPY 198

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++       +G    +  ++F V    D  K  +     P             +    EL
Sbjct: 199 IVSDTTLFGTGQLPKFGEDLFHVTRGGDEAKTTQYLI--PTAEVTLTNTVRERILPASEL 256

Query: 359 PVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           P++L      +R+E         GL+R   F + +       E  +    ++      I 
Sbjct: 257 PLKLTAHSPCFRSEAGSHGKDTRGLIRQHQFDKVEMVQIVRPEASYAALEEMVGHAEKIL 316

Query: 416 KDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
           +       ++ L T              +W  A+N  + +
Sbjct: 317 QLLELPYRVITLCTGDMGFGAAKTYDLEVWVPAQNTYREI 356


>gi|259502043|ref|ZP_05744945.1| serine-tRNA ligase [Lactobacillus antri DSM 16041]
 gi|259169956|gb|EEW54451.1| serine-tRNA ligase [Lactobacillus antri DSM 16041]
          Length = 444

 Score = 68.7 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 47/323 (14%), Positives = 104/323 (32%), Gaps = 44/323 (13%)

Query: 137 LKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKK 196
            +   S ++A +      +  K          E V    +     + R P+V   G    
Sbjct: 74  KRNGESADEAIKETRELGDKIKQL-------DEQVEANDEELHDKMSRLPNVPHDGVPVS 126

Query: 197 FFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLF 256
             +   V             L ++             +    E+    D  +  +     
Sbjct: 127 LTEDGAVE------------LRKVGKIRDFD-FAPKHHWDVGEQLGILDFDRAGKVSG-- 171

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYR 315
                 S  +++   G ++ + + ++M    +KD Y E+  P +++      +G +  ++
Sbjct: 172 ------SRFVYYLGLGAQLERAVYNFMLDEHMKDGYTEVLPPYIVNADSMYGTGQFPKFK 225

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG 375
             ++ V        +     L P         +   +    ELPV +      +R+E   
Sbjct: 226 EGVYQV--------NGEDMTLIPTAEVPLTNYYRGEVIPAEELPVYVTALTPCFRSEAGA 277

Query: 376 S---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
           +     GL+R+  F + +   +   E  ++E  K+     +I K       ++ L+T   
Sbjct: 278 AGRDTRGLIRMHQFNKVEMVKYTKPEDSWDELEKMTANAENILKKLEIPYHVITLTTSDM 337

Query: 433 KRVGSD----ALWDDAENIMKGV 451
               S+     LW  A+   + V
Sbjct: 338 SFTASETHDLELWMPAQEKYREV 360


>gi|89100960|ref|ZP_01173806.1| seryl-tRNA synthetase [Bacillus sp. NRRL B-14911]
 gi|89084331|gb|EAR63486.1| seryl-tRNA synthetase [Bacillus sp. NRRL B-14911]
          Length = 426

 Score = 68.7 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 34/223 (15%), Positives = 81/223 (36%), Gaps = 21/223 (9%)

Query: 242 EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEIN 295
           E + H  +A ++D+          GS  +F+   G ++ + L ++M     +   Y E+ 
Sbjct: 136 EPKPHWDIATDLDILDFERAGKVTGSRFVFYKGLGARLERALFNFMLDLHTEEHGYMEVL 195

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
            P ++++     +G    +  + F +        +   + L P        +    + + 
Sbjct: 196 PPYMVNRASMTGTGQLPKFEEDAFLI--------ESEDYFLIPTAEVPVTNMHRDEILTN 247

Query: 356 RELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
            +LP+  A F + +R+E   +     GL+R   F + +   F   E  + E  K+     
Sbjct: 248 EQLPINYAAFSACFRSEAGSAGRDTRGLIRQHQFNKVELVKFVRPEDSYEELEKLTGHAE 307

Query: 413 SIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENIMKGV 451
            + +  G    ++ + T              +W  +    + +
Sbjct: 308 KVLQLLGLPYRVLSMCTGDLGFTAAKKYDIEVWIPSYGTYREI 350


>gi|331091263|ref|ZP_08340104.1| alanyl-tRNA synthetase 1 [Lachnospiraceae bacterium 2_1_46FAA]
 gi|330404710|gb|EGG84249.1| alanyl-tRNA synthetase 1 [Lachnospiraceae bacterium 2_1_46FAA]
          Length = 879

 Score = 68.7 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 73/163 (44%), Gaps = 13/163 (7%)

Query: 39  VAVAIN--GKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAI 96
           +   +   GKV   S  V +  + +   E+ R+     HS  H++ +A++++        
Sbjct: 529 LGGKVGHVGKVTKGSFTVGDA-VNLSVEENGRANTCKNHSATHLLQKALKTVLGSHVEQK 587

Query: 97  GP-IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKE 155
           G  +  D   +DF      + +E+A+ E+ +   IA+++  + + ++ E+A+        
Sbjct: 588 GSLVTPDRLRFDFVHFSAMTPEEIAKTEELVNAEIAKNNAVITEVMNIEQAKATGAMALF 647

Query: 156 AYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
             K E        E+V +   G++  +LC G HV +TG +  F
Sbjct: 648 GEKYE--------EDVRVVSMGDFSKELCGGTHVANTGMITTF 682


>gi|311278355|ref|YP_003940586.1| alanyl-tRNA synthetase [Enterobacter cloacae SCF1]
 gi|308747550|gb|ADO47302.1| alanyl-tRNA synthetase [Enterobacter cloacae SCF1]
          Length = 875

 Score = 68.7 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 61/162 (37%), Gaps = 11/162 (6%)

Query: 45  GKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG- 103
           GK+ + S  V +  ++    E  R+   + HS  H+M  A++ +        G ++ D  
Sbjct: 535 GKLSNGSLKVGDA-VQADVDEVRRARIRLNHSATHLMHAALRDVLGTHVAQKGSLVNDKA 593

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE 163
             +DF   +    +E+  +E  +   I R+ P     +  E A+          K     
Sbjct: 594 LRFDFSHFEAMKPEEIRAVEDLVNAQIRRNLPVETHVMELEDAKAKGAMALFGEKY---- 649

Query: 164 SIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKFFKLMKVA 204
                + V +   G++  +LC G H   TG +  F    +  
Sbjct: 650 ----DDRVRVLSMGDFSTELCGGTHASRTGDIGLFRITSESG 687


>gi|296331700|ref|ZP_06874169.1| histidyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305675342|ref|YP_003867014.1| histidyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|296151295|gb|EFG92175.1| histidyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305413586|gb|ADM38705.1| histidyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 424

 Score = 68.7 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 73/415 (17%), Positives = 139/415 (33%), Gaps = 63/415 (15%)

Query: 276 FQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           +Q +   MR   +   Y+EI TP        +          ++   +      +  R+ 
Sbjct: 20  WQFVEQIMRDTCRTYQYKEIRTPIF---EHTELFARGVGESTDIVQKEMYTFQDRKGRSL 76

Query: 335 ALKPMNCPGHVAVFNHGLKSYREL-PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
            L+P      V  FN        + P +L   G ++R E   +     R R F Q     
Sbjct: 77  TLRPEGTAAAVRAFNENKLFANPVQPTKLYYVGPMFRYERPQT----GRYRQFYQFGIEA 132

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFG-------------------FEKIMVKLSTRPEKR 434
             +K+   +   ++  L +SIY+  G                   + + +VK      + 
Sbjct: 133 IGSKDPAIDA--EVMALAMSIYQKAGLQNVKLVINSLGDQESRKSYREALVKHFEPRIEE 190

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQD------RINTGVLLGEGAFY----------GPK 478
             SD       N ++ +LD  K+   +       I T +     A++          G  
Sbjct: 191 FCSDCQSRLHTNPLR-ILDCKKDRDHELMKTAPSILTYLNEESAAYFEKVKQYLNDLGIS 249

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK--------CHPVMIHRAVFGS 530
           +E       G D+   T     +    F A    +   +          P         S
Sbjct: 250 YEIDPNLVRGLDYYNHTAFEIMSNAEGFGAITTLAGGGRYDGLVEQIGGPEAPGIGFAMS 309

Query: 531 IERFIGIMIENFKGNLPLWLSPIQ---AIVTTITSSAVEYAQEIANLLKSHHLSIETDFR 587
           IER +   I+  K  LP+     Q     + T+   A +Y+  +   L+   +S E D+ 
Sbjct: 310 IERLLAA-IDAEKRELPV----DQGIDCYIVTLGEKAKDYSVSLVYKLREAGISSEIDYE 364

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           N+ +  + +         I I G+ E ++  I ++   +    +V+L + I ++ 
Sbjct: 365 NKKMKGQFKTADRLNARFIAILGEDELAQNKINVKDAQTGEQIEVALDEFIHVMK 419


>gi|296448225|ref|ZP_06890121.1| alanyl-tRNA synthetase [Methylosinus trichosporium OB3b]
 gi|296254265|gb|EFH01396.1| alanyl-tRNA synthetase [Methylosinus trichosporium OB3b]
          Length = 897

 Score = 68.7 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/147 (21%), Positives = 63/147 (42%), Gaps = 12/147 (8%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSS 116
           ++E+      R+     HS  HI+ EA++ +  +     G  +  D   +DF   +P + 
Sbjct: 547 ALELEIDHSRRNAVRANHSATHILHEALRRVLGDHVAQKGSLVASDRLRFDFTHPKPLTE 606

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARE------LFESKKEAYKVEILESIPAKEN 170
           +E+A++E+   E++  ++P   + ++ + A          E   +  +V  + S+   + 
Sbjct: 607 EEVAEVERIANEVVQDNAPVDTRLMAQDDAIHSGARALFGEKYGDEVRVVSMGSLSTGQP 666

Query: 171 VTLY-----RQGEWFDLCRGPHVRSTG 192
            T             +LC G HVR TG
Sbjct: 667 STDLAPTDQHHAFSVELCGGTHVRRTG 693


>gi|262340835|ref|YP_003283690.1| glycine-tRNA ligase [Blattabacterium sp. (Blattella germanica) str.
           Bge]
 gi|262272172|gb|ACY40080.1| glycine-tRNA ligase [Blattabacterium sp. (Blattella germanica) str.
           Bge]
          Length = 478

 Score = 68.7 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 65/357 (18%), Positives = 114/357 (31%), Gaps = 60/357 (16%)

Query: 306 QQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR-ELPVRLAE 364
            ++ +W   R      +  ++  KD     L+P    G    FN+ +KS R ++P  +A+
Sbjct: 155 SKTKNWTKIRHFNMMFQIKNENKKD---LYLRPETAQGIFCNFNNVIKSNRMKIPFGIAQ 211

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDA--HVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            G  +RNE   +   + R+R F Q +    +F  +E+ + E  K       ++   G +K
Sbjct: 212 IGKSFRNEI-FARKFIFRMREFEQMEMQFFIFPEEEKKWYEYWKDIRFKWHLF--LGDQK 268

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYI 482
                         S                   +  +     G    EG          
Sbjct: 269 NYKLRDHDHLAHYAS-----------------AGSDIEYNFPFGFQEVEGIH-------- 303

Query: 483 LKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
                 RD+     +       R     V    +   P +I     G    F+ I   + 
Sbjct: 304 ----SRRDFDLKKHEYFSKKKLR-----VFESRKNYIPYVIE-TSLGLDRLFLAIFTSSL 353

Query: 543 K------------GNLPLWLSPIQAIV--TTITSSAVEYAQEIANLLKSHHLSIETDFRN 588
           K              LP +LSPI+  +          E A++I N  K HH         
Sbjct: 354 KEEKLENGNTRIVLKLPPYLSPIKGAIFPLVKKDGLPETAKKIFNDFKIHHK--LIYDEK 411

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           E+I    R       P+      +     ++ +R   S   ++V + D   I+  E+
Sbjct: 412 ESIGKLYRRQDAIGTPLCFTVDYETIETNTVTMRYRDSMQQKRVHIKDICRIIKYET 468


>gi|224534381|ref|ZP_03674959.1| glycine--tRNA ligase [Borrelia spielmanii A14S]
 gi|224514483|gb|EEF84799.1| glycine--tRNA ligase [Borrelia spielmanii A14S]
          Length = 445

 Score = 68.7 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 50/338 (14%), Positives = 101/338 (29%), Gaps = 29/338 (8%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR-ELPVRLAEFGSVYRNEPS 374
            N+                 L+P    G    F + L S R ++P  +A+ G  +RNE  
Sbjct: 122 FNLMFKTHIGVVEGSSSEIYLRPETAQGIFVNFKNVLDSSRLKIPFGIAQVGKAFRNEIV 181

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
            + + + R   F Q +   F    +     C    N +    +        ++       
Sbjct: 182 -TKNFIFRTCEFEQMEMQFFVHPKQIDEWFCYWQQNRMNFFIETLKIRPNKLRFKAHDST 240

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQC 493
           ++   A         K   D      +     G    EG      ++         + + 
Sbjct: 241 QLAHYA---------KSAFDI-----EYEFPFGFQEVEGIHNRGNYDLTQHSKFSNNPKI 286

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK---GNLPLWL 550
                D     R+  + + + +     V++      S E     + +  +     L   L
Sbjct: 287 FEYH-DLLTKERYVPYVIETSAGLTRSVLMTLCDAYSEEE----LSDGDRRIVLRLHPKL 341

Query: 551 SPIQAIVTTITSSA--VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIII 608
           +P +  +  +      VE A+ I   L      I  D    TI  + R       P  + 
Sbjct: 342 APYKIAIFPLVKKVELVEVARRIYVELCD-DFHIFYDDSG-TIGKRYRRQDEIGTPYCVT 399

Query: 609 CGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
                  + ++ +R   + T +++ + D    +  E L
Sbjct: 400 VDYNTIEDETVTVRERNNMTQKRIFINDLYAYIKTEIL 437


>gi|229170865|ref|ZP_04298470.1| Seryl-tRNA synthetase [Bacillus cereus MM3]
 gi|228612600|gb|EEK69817.1| Seryl-tRNA synthetase [Bacillus cereus MM3]
          Length = 424

 Score = 68.7 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 40/224 (17%), Positives = 83/224 (37%), Gaps = 21/224 (9%)

Query: 241 SEKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEI 294
            E + H  LA ++ +          GS  +F+   G ++ + LIS+M     D   YEE+
Sbjct: 135 YEPKPHWDLATDLGILDFERAGKVTGSRFVFYKGAGARLERALISFMLDLHTDEHGYEEV 194

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
             P ++++     +G    +  + F +        +   + L P        +    + +
Sbjct: 195 LPPYMVNRASMTGTGQLPKFEEDAFRI--------ESEDYFLIPTAEVPVTNMHRDEILN 246

Query: 355 YRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI 411
             +LP+R A F S +R+E   +     GL+R   F + +   F   E  + E  K+ N  
Sbjct: 247 KEQLPIRYAAFSSCFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYEELEKLTNDA 306

Query: 412 ISIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENIMKGV 451
             + +       ++ + T              +W  +    + +
Sbjct: 307 ERVLQLLELPYRVMSMCTGDLGFTAAKKYDIEVWIPSYGTYREI 350


>gi|212637862|ref|YP_002314382.1| seryl-tRNA synthetase [Anoxybacillus flavithermus WK1]
 gi|212559342|gb|ACJ32397.1| Seryl-tRNA synthetase [Anoxybacillus flavithermus WK1]
          Length = 426

 Score = 68.7 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 37/223 (16%), Positives = 85/223 (38%), Gaps = 21/223 (9%)

Query: 242 EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEIN 295
           E + H ++A ++ +          GS  +F+   G ++ + LI++M     +   YEE+ 
Sbjct: 138 EPKPHWEIADQLGILDFERAAKVTGSRFVFYKGLGARLERALINFMLDVHVEQHGYEEVL 197

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
            P ++++     +G    +  + F +        +   + L P        +    + S 
Sbjct: 198 PPYIVNRASMTGTGQLPKFEEDAFRI--------ESEDYFLIPTAEVPVTNLHRDEILSA 249

Query: 356 RELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
            +LP++ A + + +R+E   +     GL+R   F + +   F   E  + E  K+ N   
Sbjct: 250 DDLPIKYAAYSACFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYEELEKLTNDAE 309

Query: 413 SIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENIMKGV 451
            I +  G    ++ + T              +W  +    + +
Sbjct: 310 RILQLLGLPYRVMSMCTADLGFTAAKKYDIEVWLPSYGTYREI 352


>gi|87303148|ref|ZP_01085946.1| seryl-tRNA synthetase [Synechococcus sp. WH 5701]
 gi|87282315|gb|EAQ74275.1| seryl-tRNA synthetase [Synechococcus sp. WH 5701]
          Length = 430

 Score = 68.7 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 28/178 (15%), Positives = 59/178 (33%), Gaps = 16/178 (8%)

Query: 272 GWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G ++ + LIS+M  +     Y E+  P +++      SG    +    F+    D     
Sbjct: 177 GARLERALISFMLDQHASRGYREMLPPILVNSASLTASGQLPKFAEESFSCADDD----- 231

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
                L P       +     + +  +LP++ A +   +R E         GL+R+  F 
Sbjct: 232 ---LWLTPTAEVPLTSFHRDEILAAEQLPLKYAAYTPCFRREAGSYGRDTRGLIRLHQFN 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI----MVKLSTRPEKRVGSDALW 441
           + + + FC  ++      ++     +I +                     R     +W
Sbjct: 289 KVELYWFCHPDESEAAHAQLTADAEAILQSLELPYRVLDLCCGDLGFSAARTFDLEVW 346


>gi|309389100|gb|ADO76980.1| alanyl-tRNA synthetase [Halanaerobium praevalens DSM 2228]
          Length = 877

 Score = 68.7 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 35/160 (21%), Positives = 72/160 (45%), Gaps = 16/160 (10%)

Query: 53  PVREGSIEI------ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFY 105
            V++G IE+      +   + R      HS  H++ +A++ +  E     G  +  D   
Sbjct: 537 EVKKGKIEVGEEVTAVVYHNRREATARHHSATHLLHKALKEVLGEHVNQSGSLVAPDRLR 596

Query: 106 YDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESI 165
           +DF      SS EL ++E+K+ + I  + P   +  + ++A+++  +     K       
Sbjct: 597 FDFTHFSALSSQELEELERKVNKAIRENYPVETEIKAIDEAKDMGATALFGEKY------ 650

Query: 166 PAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKFFKLMKVA 204
              + V + + G++  +LC G HVR+TG +  F  + +  
Sbjct: 651 --GQEVRVVKMGDFSLELCGGTHVRATGDIGAFKIINESG 688


>gi|225389081|ref|ZP_03758805.1| hypothetical protein CLOSTASPAR_02827 [Clostridium asparagiforme
           DSM 15981]
 gi|225044859|gb|EEG55105.1| hypothetical protein CLOSTASPAR_02827 [Clostridium asparagiforme
           DSM 15981]
          Length = 887

 Score = 68.7 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 61/132 (46%), Gaps = 10/132 (7%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSDELAQIEKKM 126
           R+L    HS  H++ +A++ +  E     G  ++ G   +DF      + +EL ++E+ +
Sbjct: 567 RALTCQNHSATHLLQKALRLVLGEHVKQSGSYVDAGRLRFDFTHFSAMTPEELGKVEELV 626

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRG 185
            + I    P   Q ++ ++A++         K          ++V + + G++  +LC G
Sbjct: 627 NQEIRAGLPVETQVMTLDEAKKTGAMALFGEKY--------GDSVRVVKMGDFSTELCGG 678

Query: 186 PHVRSTGQVKKF 197
            HV +TG +  F
Sbjct: 679 THVANTGSIASF 690


>gi|42779094|ref|NP_976341.1| seryl-tRNA synthetase [Bacillus cereus ATCC 10987]
 gi|67461814|sp|Q73FJ3|SYS_BACC1 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|42735009|gb|AAS38949.1| seryl-tRNA synthetase [Bacillus cereus ATCC 10987]
          Length = 424

 Score = 68.7 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 40/223 (17%), Positives = 83/223 (37%), Gaps = 21/223 (9%)

Query: 242 EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEIN 295
           E + H  LA ++ +          GS  +F+   G ++ + LIS+M     D   YEE+ 
Sbjct: 136 EPKPHWDLATDLGILDFERAGKVTGSRFVFYKGAGARLERALISFMLDLHTDEHGYEEVL 195

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
            P ++++     +G    +  + F +        +   + L P        +    + + 
Sbjct: 196 PPYMVNRASMTGTGQLPKFEEDAFRI--------ESEDYFLIPTAEVPVTNMHRDEILNK 247

Query: 356 RELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
            +LP+R A F S +R+E   +     GL+R   F + +   F   E  + E  K+ N   
Sbjct: 248 EQLPIRYAAFSSCFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYEELEKLXNDAE 307

Query: 413 SIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENIMKGV 451
            + +       ++ + T              +W  +    + +
Sbjct: 308 RVLQLLELPYRVMSMCTGDLGFTAAKKYDIEVWIPSYGTYREI 350


>gi|323344340|ref|ZP_08084565.1| glycyl-tRNA synthetase beta subunit [Prevotella oralis ATCC 33269]
 gi|323094467|gb|EFZ37043.1| glycyl-tRNA synthetase beta subunit [Prevotella oralis ATCC 33269]
          Length = 513

 Score = 68.7 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 57/338 (16%), Positives = 105/338 (31%), Gaps = 58/338 (17%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+        T +      L+P    G    + +  K+   +LP  +A+ G  +RNE  
Sbjct: 194 FNLMFSTEMGSTSESTNRIYLRPETAQGIFVNYLNVQKTGRMKLPFGIAQIGKAFRNEIV 253

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
            +   + R+R F Q +   F     E  + E  K   +       FG +        +  
Sbjct: 254 -ARQFIFRMREFEQMEMQFFVKPGTEMKWFETWKETRMKWHQALGFGADNYRFHDHEKLA 312

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
                    + A +I            + ++  G    EG      F+            
Sbjct: 313 HYA------NAATDI------------EFKMPFGFKEVEGIHSRTDFD------------ 342

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK--------- 543
              +        R   ++    +E   P  I  ++ G    F+ +M   F          
Sbjct: 343 ---LSQHEKFSGRQIKYFDPETNESYTPYDIETSI-GVDRMFLSVMCHAFTEETLDNGES 398

Query: 544 ---GNLPLWLSPIQAIVTTI--TSSAVEYAQEIANLLKSH--HLSIETDFRNETINYKIR 596
                LP  L+P++  V  +       E A+EI + LK H      E D    +I  + R
Sbjct: 399 RVVLKLPEALAPVKCAVLPLVKKDGLPEKAREIVDELKFHFNTHYEEKD----SIGKRYR 454

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
                  P  +       ++  + +R   S   ++V +
Sbjct: 455 RQDAIGTPFCVTVDHDTLNDNKVTLRFRDSMEQERVDI 492


>gi|317056551|ref|YP_004105018.1| alanyl-tRNA synthetase [Ruminococcus albus 7]
 gi|315448820|gb|ADU22384.1| alanyl-tRNA synthetase [Ruminococcus albus 7]
          Length = 885

 Score = 68.7 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 33/181 (18%), Positives = 75/181 (41%), Gaps = 25/181 (13%)

Query: 36  KKAVAVAINGKVCDLSDPVREGSI---EIITPEDPRSLA---VIRHSCAHIMAEAVQSIW 89
           +KAV          L   V EG++   + +T +  ++     +  HSCAH++  A++S+ 
Sbjct: 527 QKAVGGKF-----ALKVKVTEGALTVGQQVTFKVDKAKRLATMRNHSCAHLLQAALRSVL 581

Query: 90  PEVQVAIGPIIED-GFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE 148
            +     G +++     +DF   +  +++E A++E  + + I        + +   +A++
Sbjct: 582 GDHVHQAGQLVDSQRLRFDFSHFEAMTNEEKAKVEALVNKYIFDALDITMEEMPIAEAQK 641

Query: 149 LFESKKEAYKVEILESIPAKENVTLYRQGE-----WFDLCRGPHVRSTGQVKKFFKLMKV 203
           L        K          E V +   G+       + C G H+ +T ++  F  + + 
Sbjct: 642 LGAMALFGEKY--------GETVRVVTMGDKSDAASIEFCGGTHLNNTSKIGLFKIISEN 693

Query: 204 A 204
           +
Sbjct: 694 S 694


>gi|302538647|ref|ZP_07290989.1| seryl-tRNA synthetase [Streptomyces sp. C]
 gi|302447542|gb|EFL19358.1| seryl-tRNA synthetase [Streptomyces sp. C]
          Length = 427

 Score = 68.7 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 45/262 (17%), Positives = 80/262 (30%), Gaps = 21/262 (8%)

Query: 241 SEKRDHRKLAREMDLFHIAED----GSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEIN 295
               DH +L   + L   A      G+G   +   G  +   LI +  R      Y  + 
Sbjct: 133 DTPLDHVELCDRLGLVDFARGVKLGGNGYWLYTGAGAALEWALIDFFNREHYAAGYTFML 192

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
            P +L +     +G +  +  ++F V+  +    D R   L P      + V+   +   
Sbjct: 193 PPHLLTEESGFAAGQFPKFYDDVFHVQAGE----DDRKSFLLPTAETAILNVYRDEILPT 248

Query: 356 RELPVRLAEFGSVYRNEPSGSL---HGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
             LP +   +   YR E         G +R   F + +   F   +Q      ++ +   
Sbjct: 249 DTLPFKAFAYTPSYRREAGSHRSSERGTIRGHQFNKVEMFQFAAPDQAEEAFRELVDRTE 308

Query: 413 SIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV--LDTIKNSSQDRINTG 466
            + +  G       L+ R             +W  +    K V       +    R N  
Sbjct: 309 MLVEKLGLHYQTTLLAARDASATMRMTYDVEVWIPSIASYKEVSSASWAGDYQARRANIR 368

Query: 467 VLLGEGAFYGPKFEYILKDAIG 488
                G   GP       +A G
Sbjct: 369 YRPAAG---GPTAHVHTLNASG 387


>gi|255527265|ref|ZP_05394146.1| prolyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|255509050|gb|EET85409.1| prolyl-tRNA synthetase [Clostridium carboxidivorans P7]
          Length = 556

 Score = 68.7 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 64/157 (40%), Gaps = 13/157 (8%)

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
              +++A+G       + +        NA +++   +     +I+ ++  +I+R + +++
Sbjct: 387 SINIENAMG---LGQIMNLKTTYSENMNAVFLDKLGKSKPMSIINASI--NIDRLLALIV 441

Query: 540 ENFKGN----LPLWLSPIQAIVTT---ITSSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
           E          P  ++P + IV          ++ A+ I N LKS  + +  D R+E   
Sbjct: 442 EQNHDKNGIVWPKSVAPYEVIVIAAVFKNEEQMKTAENIYNKLKSLGIDVLLDDRDERAG 501

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
            K ++  +   PI I  G +  S+  +  +   +   
Sbjct: 502 VKFKDADLIGAPIRITVGKR-ISDGKVEFKLRNNDNV 537



 Score = 55.2 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 72/188 (38%), Gaps = 10/188 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  L        E+E   ++ + R      I +  SG+  +   G K+   + + ++ +
Sbjct: 4   SKMILGTLREAPGETELESYKLMVRAG---IIRKVASGIYNFMPTGKKVIGNVNNLIKNE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++  D +EI   Q +   L  Q                 +   K  + F +       ++
Sbjct: 61  MEKIDSQEIEVSQFVPFELLNQCN-----NKESSLTDTFETVDKSEKKFYVGADFKEPYI 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +  + +KSY++LPV +       ++EP     G+++ + F +   +VF       ++ +
Sbjct: 116 EIVKNEIKSYKQLPVSIYSIQKQIKDEPKPKF-GIIKSKEFNELQCYVFHDDLTESSQYI 174

Query: 406 KIHNLIIS 413
                + +
Sbjct: 175 NSLCEVFN 182


>gi|254761666|ref|ZP_05213684.1| seryl-tRNA synthetase [Bacillus anthracis str. Australia 94]
          Length = 424

 Score = 68.7 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 40/223 (17%), Positives = 83/223 (37%), Gaps = 21/223 (9%)

Query: 242 EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEIN 295
           E + H  LA ++ +          GS  +F+   G ++ + LIS+M     D   YEE+ 
Sbjct: 136 EPKPHWDLATDLGILDFERAGKVTGSRFVFYKGAGARLERALISFMLDLHTDEHGYEEVL 195

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
            P ++++     +G    +  + F +        +   + L P        +    + + 
Sbjct: 196 PPYMVNRASMTGTGQLPKFEEDAFRI--------ESEDYFLIPTAEVPVTNMHRDEILNK 247

Query: 356 RELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
            +LP+R A F S +R+E   +     GL+R   F + +   F   E  + E  K+ N   
Sbjct: 248 EQLPIRYAAFSSCFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYEELEKLTNDAE 307

Query: 413 SIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENIMKGV 451
            + +       ++ + T              +W  +    + +
Sbjct: 308 RVLQLLELPYRVMSMCTGDLGFTAAKKYDIEVWIPSYGTYREI 350


>gi|228898770|ref|ZP_04063054.1| Seryl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
 gi|228860862|gb|EEN05238.1| Seryl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
          Length = 424

 Score = 68.7 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 40/223 (17%), Positives = 83/223 (37%), Gaps = 21/223 (9%)

Query: 242 EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEIN 295
           E + H  LA ++ +          GS  +F+   G ++ + LIS+M     D   YEE+ 
Sbjct: 136 EPKPHWDLATDLGILDFERAGKVTGSRFVFYKGAGARLERALISFMLDLHTDEHGYEEVL 195

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
            P ++++     +G    +  + F +        +   + L P        +    + + 
Sbjct: 196 PPYMVNRASMTGTGQLPKFEEDAFRI--------ESEDYFLIPTAEVPVTNMHRDEILNK 247

Query: 356 RELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
            +LP+R A F S +R+E   +     GL+R   F + +   F   E  + E  K+ N   
Sbjct: 248 EQLPIRYAAFSSCFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYEELEKLTNDAE 307

Query: 413 SIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENIMKGV 451
            + +       ++ + T              +W  +    + +
Sbjct: 308 RVLQLLELPYRVMSMCTGDLGFTAAKKYDIEVWIPSYGTYREI 350


>gi|212697112|ref|ZP_03305240.1| hypothetical protein ANHYDRO_01678 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212675887|gb|EEB35494.1| hypothetical protein ANHYDRO_01678 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 134

 Score = 68.7 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 49/134 (36%), Gaps = 8/134 (5%)

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQA------IVTTITSSAVEYAQEIANLLK 576
           +     G       I+ +N+  N  +W + +        +V        + A++I   L 
Sbjct: 1   MGSYGIGITRSISAIIEQNYDDNGIIWPTKVAPFEAWITLVNKNKEDQKQLAEKIYESLL 60

Query: 577 SHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
              + +  D R E    K  +  +   P  I  G K+AS+  +   +       K+S  +
Sbjct: 61  DQGIEVMLDDRKERAGVKFNDRDLVGCPYRITVG-KDASDDIVEFSKRSDMENLKMSSDE 119

Query: 637 AIPILTKESLPPDC 650
           AI  + K S+  D 
Sbjct: 120 AIEKIVK-SIKEDL 132


>gi|315038965|ref|YP_004032533.1| seryl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
 gi|325957391|ref|YP_004292803.1| seryl-tRNA synthetase [Lactobacillus acidophilus 30SC]
 gi|312277098|gb|ADQ59738.1| seryl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
 gi|325333956|gb|ADZ07864.1| seryl-tRNA synthetase [Lactobacillus acidophilus 30SC]
 gi|327184099|gb|AEA32546.1| seryl-tRNA synthetase [Lactobacillus amylovorus GRL 1118]
          Length = 435

 Score = 68.7 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 77/188 (40%), Gaps = 9/188 (4%)

Query: 272 GWKIFQTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G  + + + ++ +    KD Y E+  P +++    Q +G +  +  +++ +   DD  K 
Sbjct: 170 GALLERAVFNFFLDENTKDGYTEVIPPYLVNDASMQGTGQFPKFHEDVYTIVDNDDPDKP 229

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFT 387
            R   L P      V  F + +    +LP+ +      +R+E   +     GL+R+  F 
Sbjct: 230 -RDLTLIPTAEVPLVNYFRNEIIHGDKLPINVTALSPAFRSEAGSAGRDTRGLIRMHEFR 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +    C  ++ ++E  K+ +    + +  G    +V LST              +W  
Sbjct: 289 KVEMVKVCKPDESWDELEKLTHNAEHLLQKLGLPYHVVALSTGDASFTSAKTYDLEVWMP 348

Query: 444 AENIMKGV 451
           A++  + +
Sbjct: 349 AQDKYREI 356


>gi|259048107|ref|ZP_05738508.1| serine--tRNA ligase [Granulicatella adiacens ATCC 49175]
 gi|259035168|gb|EEW36423.1| serine--tRNA ligase [Granulicatella adiacens ATCC 49175]
          Length = 430

 Score = 68.7 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 37/223 (16%), Positives = 86/223 (38%), Gaps = 20/223 (8%)

Query: 242 EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEIN 295
           E + H ++A  +D+          GS  +++   G ++ + + +YM     +   Y E+ 
Sbjct: 141 EPKPHWEVAEALDILDFERGAKVSGSRFLYYKGLGARLERAIYNYMLDLHVEKHGYTEMI 200

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP ++++     +G +  ++ ++F +        D R   L P         + + +   
Sbjct: 201 TPYMVNEQSMYGTGQFPKFKEDVFQLT-------DERNLTLIPTAEVPLTNYYANEILDE 253

Query: 356 RELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
            +LP+        +R+E   +     GL+R+  F + +   F   E  F+E  K+ +   
Sbjct: 254 AQLPIYFTALSPSFRSEAGSAGRDTRGLIRLHQFNKVEMVKFAKPEDSFDELEKMTDNAE 313

Query: 413 SIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
            + +  G     + L T              +W  A++  + +
Sbjct: 314 DVLRGLGLPFRTIVLCTGDMGFSAAKTYDVEVWIPAQDTYREI 356


>gi|315038168|ref|YP_004031736.1| histidyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
 gi|312276301|gb|ADQ58941.1| histidyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
          Length = 428

 Score = 68.7 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 64/414 (15%), Positives = 122/414 (29%), Gaps = 71/414 (17%)

Query: 276 FQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           +Q +    R      +Y EI TP       ++         + +   +  D   K  R  
Sbjct: 20  WQKVEETARNFFNRANYREIRTP---SFENYEIFSRSSGDSSEIVEKQMYDFNDKGGRHI 76

Query: 335 ALKPMNCPGHVAVF--NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
           AL+P    G V  +  +         P  +    S +R E   +     R R F Q    
Sbjct: 77  ALRPEGTAGVVRAYVEDKMYAPEVVKPFNVFYMESTFRYERPQA----GRQREFHQVGVE 132

Query: 393 VFCTKEQMFNECLKIHNL----------IISIYKDFGFEKIMVKLSTRPEKRVG--SDAL 440
            F +   + +    +                     G E++                D L
Sbjct: 133 SFGSSNPLADVQTIMMGHDLLAELGVKNYQLHINTLGNEQVRKDYHDALVNYFTPVKDEL 192

Query: 441 WDDAENIMKG----VLDT------------------------------IKNSSQDRINTG 466
            +D++  ++     +LD+                              +K   Q  I+  
Sbjct: 193 SEDSQRRLRDNPLRILDSKDDRDKKFLPDAPKIRDFLDDDSKQNFESILKMLDQLGIDYV 252

Query: 467 VLL----GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
           +      G   + G  FE++++D    +     +        R++      +      V 
Sbjct: 253 IDDDLVRGLDYYTGVIFEFMVEDKSLWESATTILGGG-----RYDHLVEEFNGPATPAV- 306

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSI 582
                FG  E  + +++E     L      I   +T I     + A EI   L+      
Sbjct: 307 ----GFGIGEERLMLVLEKQNPAL-FENRGIDFFITNIGDGTAQKAIEITRSLRKQGFEA 361

Query: 583 ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
           + D   + +  + ++        +I  G+KE     + I+R     T  +SL D
Sbjct: 362 DFDVNQKKLKAQFKKADRDHAKYVITLGEKELENGVLNIKRLADGKTIDLSLED 415


>gi|260584327|ref|ZP_05852074.1| serine--tRNA ligase [Granulicatella elegans ATCC 700633]
 gi|260157845|gb|EEW92914.1| serine--tRNA ligase [Granulicatella elegans ATCC 700633]
          Length = 426

 Score = 68.7 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 38/223 (17%), Positives = 86/223 (38%), Gaps = 20/223 (8%)

Query: 242 EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEIN 295
           E + H ++A  +D+          GS  +++   G ++ + + +YM     +   Y E+ 
Sbjct: 136 EPKPHWEVAEALDILDFERGAKVSGSRFLYYKGLGARLERAIYNYMIDLHVEKHGYTEMI 195

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP ++++     +G +  ++ ++F +        D R   L P         + + +   
Sbjct: 196 TPYLVNEQSMYGTGQFPKFKEDVFQI-------NDERNLTLIPTAEVPLTNYYANEILEE 248

Query: 356 RELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
            +LP+        +R+E   +     GL+R+  F + +   F T E  F E  K+ +   
Sbjct: 249 AQLPIYFTALSPSFRSEAGSAGRDTRGLIRLHQFNKVEMVKFATPETSFEELEKMTDNAE 308

Query: 413 SIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
            + +  G     + L T              +W  A++  + +
Sbjct: 309 DVLRGLGLPFRTIVLCTGDMGFSASKTYDVEVWIPAQDTYREI 351


>gi|325956619|ref|YP_004292031.1| histidyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
 gi|325333184|gb|ADZ07092.1| histidyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
 gi|327183445|gb|AEA31892.1| histidyl-tRNA synthetase [Lactobacillus amylovorus GRL 1118]
          Length = 428

 Score = 68.7 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 64/414 (15%), Positives = 122/414 (29%), Gaps = 71/414 (17%)

Query: 276 FQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           +Q +    R      +Y EI TP       ++         + +   +  D   K  R  
Sbjct: 20  WQKVEETARNFFNRANYREIRTP---SFENYEIFSRSSGDSSEIVEKQMYDFNDKGGRHI 76

Query: 335 ALKPMNCPGHVAVF--NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
           AL+P    G V  +  +         P  +    S +R E   +     R R F Q    
Sbjct: 77  ALRPEGTAGVVRAYVEDKMYAPEVVKPFNVFYMESTFRYERPQA----GRQREFHQIGVE 132

Query: 393 VFCTKEQMFNECLKIHNL----------IISIYKDFGFEKIMVKLSTRPEKRVG--SDAL 440
            F +   + +    +                     G E++                D L
Sbjct: 133 SFGSSNPLADVQTIMMGHDLLAELGVKNYQLHINTLGNEQVRKDYHDALVNYFTPVKDEL 192

Query: 441 WDDAENIMKG----VLDT------------------------------IKNSSQDRINTG 466
            +D++  ++     +LD+                              +K   Q  I+  
Sbjct: 193 SEDSQRRLRDNPLRILDSKDDRDKKFLPDAPKIRDFLDDDSKQNFESILKMLDQLGIDYV 252

Query: 467 VLL----GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
           +      G   + G  FE++++D    +     +        R++      +      V 
Sbjct: 253 IDDDLVRGLDYYTGVIFEFMVEDKSLWESATTILGGG-----RYDHLVEEFNGPATPAV- 306

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSI 582
                FG  E  + +++E     L      I   +T I     + A EI   L+      
Sbjct: 307 ----GFGIGEERLMLVLEKQNPAL-FENRGIDFFITNIGDGTAQKAIEITRSLRKQGFEA 361

Query: 583 ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
           + D   + +  + ++        +I  G+KE     + I+R     T  +SL D
Sbjct: 362 DFDVNQKKLKAQFKKADRDHAKYVITLGEKELENGVLNIKRLADGKTIDLSLED 415


>gi|296187244|ref|ZP_06855640.1| prolyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|296048115|gb|EFG87553.1| prolyl-tRNA synthetase [Clostridium carboxidivorans P7]
          Length = 556

 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 64/157 (40%), Gaps = 13/157 (8%)

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
              +++A+G       + +        NA +++   +     +I+ ++  +I+R + +++
Sbjct: 387 SINIENAMG---LGQIMNLKTTYSENMNAVFLDKLGKSKPMSIINASI--NIDRLLALIV 441

Query: 540 ENFKGN----LPLWLSPIQAIVTT---ITSSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
           E          P  ++P + IV          ++ A+ I N LKS  + +  D R+E   
Sbjct: 442 EQNHDKNGIVWPKSVAPYEVIVIAAVFKNEEQMKTAENIYNKLKSLGIDVLLDDRDERAG 501

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
            K ++  +   PI I  G +  S+  +  +   +   
Sbjct: 502 VKFKDADLIGAPIRITVGKR-ISDGKVEFKLRNNDNV 537



 Score = 49.4 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 71/188 (37%), Gaps = 10/188 (5%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  L        E+E   ++ + R      I +  SG+  +     K+   + + ++ +
Sbjct: 4   SKMILGTLREAPGETELESYKLMVRAG---IIRKVASGIYNFMPTRKKVIGNVNNLIKNE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
           ++  D +EI   Q +   L  Q                 +   K  + F +       ++
Sbjct: 61  MEKIDSQEIEVSQFVPFELLNQCN-----NKESSLTDTFETVDKSEKKFYVGADFKEPYI 115

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
            +  + +KSY++LPV +       ++EP     G+++ + F +   +VF       ++ +
Sbjct: 116 EIVKNEIKSYKQLPVSIYSIQKQIKDEPKPKF-GIIKSKEFNELQCYVFHDDLTESSQYI 174

Query: 406 KIHNLIIS 413
                + +
Sbjct: 175 NSLCEVFN 182


>gi|206972683|ref|ZP_03233623.1| seryl-tRNA synthetase [Bacillus cereus AH1134]
 gi|228950564|ref|ZP_04112700.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki str.
           T03a001]
 gi|229067780|ref|ZP_04201099.1| Seryl-tRNA synthetase [Bacillus cereus F65185]
 gi|229077289|ref|ZP_04209972.1| Seryl-tRNA synthetase [Bacillus cereus Rock4-2]
 gi|229176616|ref|ZP_04304022.1| Seryl-tRNA synthetase [Bacillus cereus 172560W]
 gi|206732403|gb|EDZ49585.1| seryl-tRNA synthetase [Bacillus cereus AH1134]
 gi|228606846|gb|EEK64261.1| Seryl-tRNA synthetase [Bacillus cereus 172560W]
 gi|228706012|gb|EEL58317.1| Seryl-tRNA synthetase [Bacillus cereus Rock4-2]
 gi|228715333|gb|EEL67190.1| Seryl-tRNA synthetase [Bacillus cereus F65185]
 gi|228809107|gb|EEM55590.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki str.
           T03a001]
          Length = 424

 Score = 68.3 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 40/223 (17%), Positives = 83/223 (37%), Gaps = 21/223 (9%)

Query: 242 EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEIN 295
           E + H  LA ++ +          GS  +F+   G ++ + LIS+M     D   YEE+ 
Sbjct: 136 EPKPHWDLATDLGILDFERAGKVTGSRFVFYKGAGARLERALISFMLDLHTDEHGYEEVL 195

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
            P ++++     +G    +  + F +        +   + L P        +    + + 
Sbjct: 196 PPYMVNRASMTGTGQLPKFEEDAFRI--------ESEDYFLIPTAEVPVTNMHRDEILNK 247

Query: 356 RELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
            +LP+R A F S +R+E   +     GL+R   F + +   F   E  + E  K+ N   
Sbjct: 248 EQLPIRYAAFSSCFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYEELEKLTNDAE 307

Query: 413 SIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENIMKGV 451
            + +       ++ + T              +W  +    + +
Sbjct: 308 RVLQLLELPYRVMSMCTGDLGFTAAKKYDIEVWIPSYGTYREI 350


>gi|52145196|ref|YP_081631.1| seryl-tRNA synthetase [Bacillus cereus E33L]
 gi|67461705|sp|Q63HF6|SYS_BACCZ RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|51978665|gb|AAU20215.1| serine--tRNA ligase (seryl-tRNA synthetase) [Bacillus cereus E33L]
          Length = 424

 Score = 68.3 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 40/223 (17%), Positives = 83/223 (37%), Gaps = 21/223 (9%)

Query: 242 EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEIN 295
           E + H  LA ++ +          GS  +F+   G ++ + LIS+M     D   YEE+ 
Sbjct: 136 EPKPHWDLATDLGILDFERAGKVTGSRFVFYKGAGARLERALISFMLDLHTDEHGYEEVL 195

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
            P ++++     +G    +  + F +        +   + L P        +    + + 
Sbjct: 196 PPYMVNRASMTGTGQLPKFEEDAFRI--------ESEDYFLIPTAEVPVTNMHRDEILNK 247

Query: 356 RELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
            +LP+R A F S +R+E   +     GL+R   F + +   F   E  + E  K+ N   
Sbjct: 248 EQLPIRYAAFSSCFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYEELEKLTNDAE 307

Query: 413 SIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENIMKGV 451
            + +       ++ + T              +W  +    + +
Sbjct: 308 RVLQLLELPYRVMSMCTGDLGFTAAKKYDIEVWIPSYGTYREI 350


>gi|20094974|ref|NP_614821.1| histidyl-tRNA synthetase [Methanopyrus kandleri AV19]
 gi|32130124|sp|Q8TV61|SYH_METKA RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|19888228|gb|AAM02751.1| Histidyl-tRNA synthetase [Methanopyrus kandleri AV19]
          Length = 421

 Score = 68.3 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 68/415 (16%), Positives = 132/415 (31%), Gaps = 61/415 (14%)

Query: 268 WHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADD 326
           +  +  +  + L  Y+    +   YEE+ TP      L+++              +    
Sbjct: 17  FTPEEMRARRWLERYLLDVFRSYGYEEVLTPTFEHAKLFEEKS------GEEILEEMYVF 70

Query: 327 TIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
             K  R  AL+P      V  +N  LK+    P++LA   + +R E         R R F
Sbjct: 71  KDKKGRKLALRPEMTAPVVRFYNAELKTRPH-PLKLAYIVNCFRYEQPQR----GRWREF 125

Query: 387 TQDDAHVFCTKEQMFN-ECLKIHNLIISIYKDFGFEKIMVKL-----STRPEKRVGSDAL 440
            Q    VF +     + E +++   I       G  ++ V           E  +G D  
Sbjct: 126 WQAGVEVFGSDRPEADVEVIELTYRIFDGILPSGAFEVRVGHLGILRGLLEEYGIGEDVQ 185

Query: 441 WDDAENIMKGVLDTIK----------------NSSQDRINTGVLLGEGAFYGPKFEYILK 484
              A  + KG LD +K                  S+  +   V   E A    +    + 
Sbjct: 186 NKVAHLVDKGELDEVKTLLPAEPAEKALAVVTARSESEVEEAVSGKERAERALENLMEIS 245

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
           DA+    + G         +R   +Y     E   P +   +      R+  ++ E    
Sbjct: 246 DAL---REAGVDHELDFSVARGLDYYTGMVFEIHVPELGGGSQCAGGGRYDDLVKELGGP 302

Query: 545 NLPLW----------------------LSPIQAIVTTITSSAVEYAQEIANLLKSHHLSI 582
           ++P                        +   +A++  +  S   +  EIA  L+     +
Sbjct: 303 DVPAVGMAIGFDRLLLAAELYDRIPDGVEETRALLIPLVRSGKIW--EIAAKLRKLGWVV 360

Query: 583 ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
             +   + I   +      +    +I G++E  E  + ++   +   ++V L   
Sbjct: 361 NVEVSGKHIRKALSLADSLEYDYAVIVGERELKEGYVSVKNLKTGVQEEVPLDQL 415


>gi|311069241|ref|YP_003974164.1| histidyl-tRNA synthetase [Bacillus atrophaeus 1942]
 gi|310869758|gb|ADP33233.1| histidyl-tRNA synthetase [Bacillus atrophaeus 1942]
          Length = 424

 Score = 68.3 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 71/413 (17%), Positives = 136/413 (32%), Gaps = 59/413 (14%)

Query: 276 FQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           +Q +   MR   +   Y+EI TP        +          ++   +      +  R+ 
Sbjct: 20  WQYVEQIMRDTCRTYQYKEIRTPIF---EHTELFARGVGESTDIVQKEMYTFQDRKGRSL 76

Query: 335 ALKP--MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
            L+P            N    +  + P +L   G ++R E   +     R R F Q    
Sbjct: 77  TLRPEGTAAAVRAFTENKLFANPVQ-PTKLYYVGPMFRYERPQT----GRFRQFYQFGIE 131

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFG-------------------FEKIMVKLSTRPEK 433
              +K+   +   ++  L +SIY+  G                   + + +VK       
Sbjct: 132 AIGSKDPAIDA--EVIALAMSIYQRAGLKNVKLVLNSLGDKESRTSYREALVKHFEPRID 189

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQD------RINTGVLLGEGAFY----------GP 477
              SD       N ++ +LD  K+   +       I   +     A++          G 
Sbjct: 190 EFCSDCQSRLYTNPLR-ILDCKKDRDHELMKTAPSILEYLNEESKAYFQKVQQYVTELGI 248

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK--------CHPVMIHRAVFG 529
            FE       G D+   T     +    F A    +   +          P         
Sbjct: 249 PFEIDPNLVRGLDYYNHTAFEIMSNAEGFGAITTLAGGGRYDGLVEQIGGPEAPGIGFAM 308

Query: 530 SIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE 589
           SIER +   I+  K  LP+  + I   + T+   A +Y+  +   L+   +S E D+ N+
Sbjct: 309 SIERLLAA-IDAEKTELPVSQA-IDCYIVTLGEKAKDYSVSLVYKLREAGISSEIDYENK 366

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +  + +         I I G+ E ++  I ++   +    +V+L + I  + 
Sbjct: 367 KMKGQFKTADRLNARFIAILGEDELAQNRINVKDAKTGEQLEVALDELIRFMK 419


>gi|189347312|ref|YP_001943841.1| seryl-tRNA synthetase [Chlorobium limicola DSM 245]
 gi|238692177|sp|B3EF00|SYS_CHLL2 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|189341459|gb|ACD90862.1| seryl-tRNA synthetase [Chlorobium limicola DSM 245]
          Length = 427

 Score = 68.3 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/253 (13%), Positives = 78/253 (30%), Gaps = 33/253 (13%)

Query: 212 SNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED----GSGVIF 267
               +L    G  +     L             +H +L + + +          G+G   
Sbjct: 122 EENVILKEQGGFDYPLDFPLK------------NHTELGKSLGILDFERGAKVGGAGFPV 169

Query: 268 WHRKGWKIFQTLISYMRRKIK--DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD 325
           +  KG ++ ++LI++M         Y EI  P ++++   + +G W  +   ++ +    
Sbjct: 170 YTGKGARLERSLINFMLDTHTSGHGYTEIFPPFLVNRESLRGTGQWPKFADQVYTI---- 225

Query: 326 DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMR 382
               +       P        +    +    +LP+  A + + +R E         G +R
Sbjct: 226 ----EEDGLYAIPTAEVPVTNLHRGEMLDAADLPIAYAAYSACFRREAGSYGKDTRGFLR 281

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI----MVKLSTRPEKRVGSD 438
           V  F + +   F   E  +    +I     +I                  +    +    
Sbjct: 282 VHQFNKVEMVRFTRPEVSYEALEEIRQHAEAILLALKIPYRVLLLCSGDISANATKCYDI 341

Query: 439 ALWDDAENIMKGV 451
            +W  AE+     
Sbjct: 342 EVWSPAEDKYLEA 354


>gi|227518019|ref|ZP_03948068.1| seryl-tRNA synthetase [Enterococcus faecalis TX0104]
 gi|307287079|ref|ZP_07567152.1| seryl-tRNA synthetase [Enterococcus faecalis TX0109]
 gi|227074541|gb|EEI12504.1| seryl-tRNA synthetase [Enterococcus faecalis TX0104]
 gi|306501858|gb|EFM71148.1| seryl-tRNA synthetase [Enterococcus faecalis TX0109]
 gi|315151232|gb|EFT95248.1| seryl-tRNA synthetase [Enterococcus faecalis TX0012]
 gi|315165765|gb|EFU09782.1| seryl-tRNA synthetase [Enterococcus faecalis TX1302]
          Length = 423

 Score = 68.3 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 37/223 (16%), Positives = 86/223 (38%), Gaps = 21/223 (9%)

Query: 242 EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEIN 295
           E + H ++   + +          GS  +++   G ++ + + ++M  +  +   Y E+ 
Sbjct: 136 EPKPHWEIGEALGILDFERGAKVSGSRFLYYKGLGARLERAVYNFMLDQHVNEHGYTEVI 195

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
            P +++      +G +  ++ ++F V  +D T+         P         +N+ +   
Sbjct: 196 PPYLVNSKAMFGTGQFPKFKEDVFQVAESDLTLI--------PTAEVPLTNYYNNEILEA 247

Query: 356 RELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
           +ELP+        +R+E   +     GL+R+  F + +   F   E  + E  K+ N   
Sbjct: 248 QELPIYFTALSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFSDAEHSYEELEKMTNNAG 307

Query: 413 SIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
            I +  G    ++ LST              +W  A+   + +
Sbjct: 308 DILEKLGLPYRVITLSTGDMGFSAAKTYDLEVWIPAQKTYREI 350


>gi|196041939|ref|ZP_03109226.1| serine--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|196027194|gb|EDX65814.1| serine--tRNA ligase [Bacillus cereus NVH0597-99]
          Length = 424

 Score = 68.3 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 40/223 (17%), Positives = 83/223 (37%), Gaps = 21/223 (9%)

Query: 242 EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEIN 295
           E + H  LA ++ +          GS  +F+   G ++ + LIS+M     D   YEE+ 
Sbjct: 136 EPKPHWDLATDLGILDFERAGKVTGSRFVFYKGAGARLERALISFMLDLHTDEHGYEEVL 195

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
            P ++++     +G    +  + F +        +   + L P        +    + + 
Sbjct: 196 PPYMVNRASMTGTGQLPKFEEDAFRI--------ESEDYFLIPTAEVPVTNMHRDEILNK 247

Query: 356 RELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
            +LP+R A F S +R+E   +     GL+R   F + +   F   E  + E  K+ N   
Sbjct: 248 EQLPIRYAAFSSCFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYEELEKLTNDAE 307

Query: 413 SIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENIMKGV 451
            + +       ++ + T              +W  +    + +
Sbjct: 308 RVLQLLELPYRVMSMCTGDLGFTAAKKYDIEVWIPSYGTYREI 350


>gi|91976212|ref|YP_568871.1| alanyl-tRNA synthetase [Rhodopseudomonas palustris BisB5]
 gi|123735560|sp|Q13AB9|SYA_RHOPS RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|91682668|gb|ABE38970.1| alanyl-tRNA synthetase [Rhodopseudomonas palustris BisB5]
          Length = 891

 Score = 68.3 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 33/142 (23%), Positives = 59/142 (41%), Gaps = 5/142 (3%)

Query: 56  EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPF 114
           E ++ +      RS     HS  H++ EA++ +  +     G  +  D   +DF  ++P 
Sbjct: 545 EAALALEVDHSRRSSIRANHSATHLLHEALRQVLGDHIAQKGSMVAPDRLRFDFVHQKPI 604

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYK----VEILESIPAKEN 170
           + DEL ++E    +I+  +     + ++ + ARE         K    V ++    A   
Sbjct: 605 TQDELRRVEDIANDIVLENDEVTTRLMAVDDAREAGARALFGEKYGDEVRVVSMGKASRE 664

Query: 171 VTLYRQGEWFDLCRGPHVRSTG 192
                 G   +LC G HVR TG
Sbjct: 665 HGSNAFGWSVELCGGTHVRRTG 686


>gi|30260206|ref|NP_842583.1| seryl-tRNA synthetase [Bacillus anthracis str. Ames]
 gi|47525268|ref|YP_016617.1| seryl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49183051|ref|YP_026303.1| seryl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|49478185|ref|YP_034372.1| seryl-tRNA synthetase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|65317479|ref|ZP_00390438.1| COG0172: Seryl-tRNA synthetase [Bacillus anthracis str. A2012]
 gi|118475790|ref|YP_892941.1| seryl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|165873234|ref|ZP_02217845.1| seryl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167635026|ref|ZP_02393343.1| seryl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|167641731|ref|ZP_02399974.1| seryl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|170688939|ref|ZP_02880141.1| seryl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|170707501|ref|ZP_02897954.1| seryl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|177655686|ref|ZP_02937011.1| seryl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190569337|ref|ZP_03022229.1| seryl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|196036387|ref|ZP_03103784.1| seryl-tRNA synthetase [Bacillus cereus W]
 gi|196047691|ref|ZP_03114895.1| seryl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|218901218|ref|YP_002449052.1| seryl-tRNA synthetase [Bacillus cereus AH820]
 gi|225862069|ref|YP_002747447.1| seryl-tRNA synthetase [Bacillus cereus 03BB102]
 gi|227812690|ref|YP_002812699.1| seryl-tRNA synthetase [Bacillus anthracis str. CDC 684]
 gi|228912755|ref|ZP_04076404.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|228925270|ref|ZP_04088368.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228931519|ref|ZP_04094427.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228943823|ref|ZP_04106210.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|229089148|ref|ZP_04220432.1| Seryl-tRNA synthetase [Bacillus cereus Rock3-42]
 gi|229119679|ref|ZP_04248942.1| Seryl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|229159191|ref|ZP_04287217.1| Seryl-tRNA synthetase [Bacillus cereus R309803]
 gi|229182411|ref|ZP_04309664.1| Seryl-tRNA synthetase [Bacillus cereus BGSC 6E1]
 gi|229194407|ref|ZP_04321212.1| Seryl-tRNA synthetase [Bacillus cereus m1293]
 gi|229600591|ref|YP_002864668.1| serine--tRNA ligase [Bacillus anthracis str. A0248]
 gi|254686605|ref|ZP_05150464.1| seryl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066]
 gi|254724158|ref|ZP_05185943.1| seryl-tRNA synthetase [Bacillus anthracis str. A1055]
 gi|254737007|ref|ZP_05194712.1| seryl-tRNA synthetase [Bacillus anthracis str. Western North
           America USA6153]
 gi|254744205|ref|ZP_05201886.1| seryl-tRNA synthetase [Bacillus anthracis str. Kruger B]
 gi|254751196|ref|ZP_05203235.1| seryl-tRNA synthetase [Bacillus anthracis str. Vollum]
 gi|301051753|ref|YP_003789964.1| seryl-tRNA synthetase [Bacillus anthracis CI]
 gi|46577221|sp|Q81W25|SYS_BACAN RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|67461763|sp|Q6HPZ8|SYS_BACHK RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|166200600|sp|A0R891|SYS_BACAH RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|226701386|sp|B7JJC8|SYS_BACC0 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|254783003|sp|C3P9G2|SYS_BACAA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|254783004|sp|C3LIY9|SYS_BACAC RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|254783005|sp|C1ES19|SYS_BACC3 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|30253527|gb|AAP24069.1| serine--tRNA ligase [Bacillus anthracis str. Ames]
 gi|47500416|gb|AAT29092.1| seryl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49176978|gb|AAT52354.1| seryl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|49329741|gb|AAT60387.1| serine--tRNA ligase (seryl-tRNA synthetase) [Bacillus thuringiensis
           serovar konkukian str. 97-27]
 gi|118415015|gb|ABK83434.1| seryl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|164711032|gb|EDR16598.1| seryl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167510285|gb|EDR85688.1| seryl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|167529500|gb|EDR92250.1| seryl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|170127497|gb|EDS96371.1| seryl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|170667163|gb|EDT17924.1| seryl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|172080026|gb|EDT65126.1| seryl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190559559|gb|EDV13552.1| seryl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|195991017|gb|EDX54988.1| seryl-tRNA synthetase [Bacillus cereus W]
 gi|196021476|gb|EDX60179.1| seryl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|218539339|gb|ACK91737.1| seryl-tRNA synthetase [Bacillus cereus AH820]
 gi|225785776|gb|ACO25993.1| serine--tRNA ligase [Bacillus cereus 03BB102]
 gi|227004875|gb|ACP14618.1| serine--tRNA ligase [Bacillus anthracis str. CDC 684]
 gi|228589063|gb|EEK47076.1| Seryl-tRNA synthetase [Bacillus cereus m1293]
 gi|228601057|gb|EEK58624.1| Seryl-tRNA synthetase [Bacillus cereus BGSC 6E1]
 gi|228624272|gb|EEK81072.1| Seryl-tRNA synthetase [Bacillus cereus R309803]
 gi|228663770|gb|EEL19347.1| Seryl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|228694189|gb|EEL47868.1| Seryl-tRNA synthetase [Bacillus cereus Rock3-42]
 gi|228815847|gb|EEM62081.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228828137|gb|EEM73863.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228834384|gb|EEM79923.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228846882|gb|EEM91885.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|229264999|gb|ACQ46636.1| serine--tRNA ligase [Bacillus anthracis str. A0248]
 gi|300373922|gb|ADK02826.1| seryl-tRNA synthetase [Bacillus cereus biovar anthracis str. CI]
 gi|324324006|gb|ADY19266.1| seryl-tRNA synthetase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 424

 Score = 68.3 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 40/223 (17%), Positives = 83/223 (37%), Gaps = 21/223 (9%)

Query: 242 EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEIN 295
           E + H  LA ++ +          GS  +F+   G ++ + LIS+M     D   YEE+ 
Sbjct: 136 EPKPHWDLATDLGILDFERAGKVTGSRFVFYKGAGARLERALISFMLDLHTDEHGYEEVL 195

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
            P ++++     +G    +  + F +        +   + L P        +    + + 
Sbjct: 196 PPYMVNRASMTGTGQLPKFEEDAFRI--------ESEDYFLIPTAEVPVTNMHRDEILNK 247

Query: 356 RELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
            +LP+R A F S +R+E   +     GL+R   F + +   F   E  + E  K+ N   
Sbjct: 248 EQLPIRYAAFSSCFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYEELEKLTNDAE 307

Query: 413 SIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENIMKGV 451
            + +       ++ + T              +W  +    + +
Sbjct: 308 RVLQLLELPYRVMSMCTGDLGFTAAKKYDIEVWIPSYGTYREI 350


>gi|332799864|ref|YP_004461363.1| Histidyl-tRNA synthetase [Tepidanaerobacter sp. Re1]
 gi|332697599|gb|AEE92056.1| Histidyl-tRNA synthetase [Tepidanaerobacter sp. Re1]
          Length = 438

 Score = 68.3 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 44/110 (40%)

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
           R    + E          +  + ++  +  S   YA +IAN L+ +++  E  F +  I 
Sbjct: 329 RLFYQLKEAGLLENDTPSTFTKVLIIPMDESFNGYAIKIANTLRENNIISEVYFEDAKIG 388

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            K+   +   IP  I  GD+E   +   ++   S     +++ D I  + 
Sbjct: 389 KKLNYANNLNIPYTIFIGDEEVKNQKASLKDMKSGFQALITVDDVIKTVK 438



 Score = 48.6 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 72/219 (32%), Gaps = 26/219 (11%)

Query: 269 HRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
             K   +F  +   +R   +   +  I+TP +               ++ +   K   +T
Sbjct: 18  LPKDQILFNEIKDIIRNTYEKHGFIPIDTPLI--------------EKSEILLAKGGGET 63

Query: 328 IKDLRTFALKPMNCPGHVAV------FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLM 381
            K +  F     +      +      +     S    P R    G VYR E S       
Sbjct: 64  EKQIYRFTKGDTDMALRFDLTVPLARYVAQHFSELTFPFRRYHIGKVYRGEKSQR----G 119

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE-KRVGSDAL 440
           R R F Q D  +    +       +I ++I   +K+ GFE   +K++ R       S   
Sbjct: 120 RFREFYQCDVDIIGNGKLNVIYDAEILSIIYCTFKNLGFENFTIKINNRKILNGFFSSLG 179

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
             ++  +++ +    K   +  I+  + LG       K 
Sbjct: 180 ITNSVEVLRAIDKLEKIGEKGVIDELINLGLSRDAVTKI 218


>gi|329940509|ref|ZP_08289790.1| seryl-tRNA synthetase [Streptomyces griseoaurantiacus M045]
 gi|329300570|gb|EGG44467.1| seryl-tRNA synthetase [Streptomyces griseoaurantiacus M045]
          Length = 440

 Score = 68.3 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 40/234 (17%), Positives = 76/234 (32%), Gaps = 16/234 (6%)

Query: 220 IYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDL----FHIAEDGSGVIFWHRKGWKI 275
           + G   N +               RDH +LAR + L          GSG   +   G  +
Sbjct: 122 LAGGKENNEVIREAGQRREFGFTPRDHVELARTLGLVDYERGTKLGGSGFWIYRGDGALL 181

Query: 276 -FQTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
            +  L  ++   ++D YE +  P +L       +G +  +   +FA++  +         
Sbjct: 182 EWALLNHFLEAHVRDGYEFVLPPHILTFAAGYTAGQFPKFADEVFALEQGE----HGPER 237

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG---SLHGLMRVRGFTQDDA 391
            L P      V +         ELP +   +   YR E  G   +  G +R   F + + 
Sbjct: 238 FLLPTAETALVNLHRDETLPETELPRKYVAYTPCYRKEAGGYRTAERGTLRGHQFNKVEL 297

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP----EKRVGSDALW 441
             F   +       ++      + K  G    + +L+         +     +W
Sbjct: 298 FQFTHPDASDAAHQELLGRAEDLVKGLGLHYRITRLAAGDTSAAMAKTYDVEVW 351


>gi|167749584|ref|ZP_02421711.1| hypothetical protein EUBSIR_00542 [Eubacterium siraeum DSM 15702]
 gi|167657438|gb|EDS01568.1| hypothetical protein EUBSIR_00542 [Eubacterium siraeum DSM 15702]
          Length = 878

 Score = 68.3 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 28/144 (19%), Positives = 58/144 (40%), Gaps = 8/144 (5%)

Query: 55  REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIED-GFYYDFDKEQP 113
            + S++    E  R      H+CAH++  A++ +  +     G  ++     +DF     
Sbjct: 544 TDDSVKSAVDEKKRMATARNHTCAHLLQAALRKVLGDHVHQAGSFVDPYRCRFDFSHFSA 603

Query: 114 FSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTL 173
            + +EL +IE  + + I    P + + L  E+AR+         K   +  +    +V+ 
Sbjct: 604 VTPEELEKIEMLVNDWILAGIPVVTEELPIEEARKKGAMALFGEKYGDIVRVVQAGDVS- 662

Query: 174 YRQGEWFDLCRGPHVRSTGQVKKF 197
                  + C G H+ +T +   F
Sbjct: 663 ------TEFCGGTHLDNTAKAGLF 680


>gi|309805100|ref|ZP_07699153.1| serine--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
 gi|308165554|gb|EFO67784.1| serine--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
          Length = 406

 Score = 68.3 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 74/188 (39%), Gaps = 9/188 (4%)

Query: 272 GWKIFQTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G  + + + ++ +   +K  Y E+  P +++    Q +G +  +  +++ +   DD  K 
Sbjct: 140 GALLERAVFNFFLDENVKAGYTEVIPPYLVNYDSMQGTGQFPKFTEDVYTIVDNDDPDKP 199

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFT 387
            R   L P      V  F   +   ++LP+ +      +R+E   +     GL+R+  F 
Sbjct: 200 -RELTLIPTAEVPLVNYFRDKILDIKQLPINVTAMSPAFRSEAGSAGRDTRGLIRMHEFR 258

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +    C ++  + E  K+      + +       +V LST              +W  
Sbjct: 259 KVEMVKICDEDSSWQELDKLTKNAEHLLQKLELPYHVVALSTGDASFTSAKTYDLEVWMP 318

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 319 AQNQYREI 326


>gi|218895153|ref|YP_002443564.1| seryl-tRNA synthetase [Bacillus cereus G9842]
 gi|228937319|ref|ZP_04099967.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar berliner ATCC
           10792]
 gi|228963114|ref|ZP_04124285.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228970205|ref|ZP_04130866.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar thuringiensis
           str. T01001]
 gi|228976775|ref|ZP_04137189.1| Seryl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|226701387|sp|B7IS31|SYS_BACC2 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|218545743|gb|ACK98137.1| seryl-tRNA synthetase [Bacillus cereus G9842]
 gi|228782937|gb|EEM31101.1| Seryl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228789506|gb|EEM37424.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar thuringiensis
           str. T01001]
 gi|228796570|gb|EEM44007.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228822344|gb|EEM68324.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar berliner ATCC
           10792]
 gi|326937809|gb|AEA13705.1| seryl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 424

 Score = 68.3 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 40/223 (17%), Positives = 83/223 (37%), Gaps = 21/223 (9%)

Query: 242 EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEIN 295
           E + H  LA ++ +          GS  +F+   G ++ + LIS+M     D   YEE+ 
Sbjct: 136 EPKPHWDLATDLGILDFERAGKVTGSRFVFYKGAGARLERALISFMLDLHTDEHGYEEVL 195

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
            P ++++     +G    +  + F +        +   + L P        +    + + 
Sbjct: 196 PPYMVNRASMTGTGQLPKFEEDAFRI--------ESEDYFLIPTAEVPVTNMHRDEILNK 247

Query: 356 RELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
            +LP+R A F S +R+E   +     GL+R   F + +   F   E  + E  K+ N   
Sbjct: 248 EQLPIRYAAFSSCFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYEELEKLTNDAE 307

Query: 413 SIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENIMKGV 451
            + +       ++ + T              +W  +    + +
Sbjct: 308 RVLQLLELPYRVMSMCTGDLGFTAAKKYDIEVWIPSYGTYREI 350


>gi|197124228|ref|YP_002136179.1| alanyl-tRNA synthetase [Anaeromyxobacter sp. K]
 gi|196174077|gb|ACG75050.1| alanyl-tRNA synthetase [Anaeromyxobacter sp. K]
          Length = 905

 Score = 68.3 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 34/142 (23%), Positives = 63/142 (44%), Gaps = 9/142 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFS 115
            ++E+   +  R L    HS  H++  A++ +  E     G ++  D   +DF   QP +
Sbjct: 577 DAVELAVDDRRRDLVRANHSATHLLQFALREVLGEHVKQAGSVVAPDYLRFDFSHFQPVT 636

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            +ELA +E+++ +++  ++      L  E+AR          K          + V + R
Sbjct: 637 EEELAAVERRVNDLVRENAETETAVLKLEEARHAGAMMIFGEKY--------GDVVRVVR 688

Query: 176 QGEWFDLCRGPHVRSTGQVKKF 197
            G   +LC G HVR +G +  F
Sbjct: 689 IGPSKELCGGTHVRRSGDIAFF 710


>gi|329943234|ref|ZP_08292008.1| seryl-tRNA synthetase [Chlamydophila psittaci Cal10]
 gi|332287813|ref|YP_004422714.1| seryl-tRNA synthetase [Chlamydophila psittaci 6BC]
 gi|313848385|emb|CBY17389.1| seryl-tRNA synthetase [Chlamydophila psittaci RD1]
 gi|325506521|gb|ADZ18159.1| seryl-tRNA synthetase [Chlamydophila psittaci 6BC]
 gi|328814781|gb|EGF84771.1| seryl-tRNA synthetase [Chlamydophila psittaci Cal10]
 gi|328915073|gb|AEB55906.1| seryl-tRNA synthetase [Chlamydophila psittaci 6BC]
          Length = 426

 Score = 68.3 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 41/243 (16%), Positives = 82/243 (33%), Gaps = 18/243 (7%)

Query: 209 RGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFW 268
             D     + +  G+          ++   ++ +  D +  A+       A    GV   
Sbjct: 114 CPDKTGNQVIKQVGSLPTFSFTPKHHVELNQKLQILDFKLPAKTSGSGWPAYKNQGVC-- 171

Query: 269 HRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTI 328
               W +   L++  R      ++    P ++   +   SG    +    + V+  D   
Sbjct: 172 --LEWALLTYLLNKQREH---GFQLWLPPLLVKHDILFGSGQIPKFDGQYYRVEDGD--- 223

Query: 329 KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE---PSGSLHGLMRVRG 385
              ++  L P          +  + S ++LP+  A F   +R E         GL+RV  
Sbjct: 224 ---QSLYLIPTAEVVLNGFHSQEIFSEKDLPIYYAAFTPCFRREAGAAGAHERGLVRVHQ 280

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
           F + +   F T +Q      K+ +++  I  +      +  LST       S  +  DAE
Sbjct: 281 FHKVEMFAFTTPDQADQAYDKMLSVVEDILTELKLPYRLSLLSTGDMSFTASKTI--DAE 338

Query: 446 NIM 448
             +
Sbjct: 339 VWL 341


>gi|309808556|ref|ZP_07702453.1| serine--tRNA ligase [Lactobacillus iners LactinV 01V1-a]
 gi|308168206|gb|EFO70327.1| serine--tRNA ligase [Lactobacillus iners LactinV 01V1-a]
          Length = 384

 Score = 68.3 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 74/188 (39%), Gaps = 9/188 (4%)

Query: 272 GWKIFQTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G  + + + ++ +   +K  Y E+  P +++    Q +G +  +  +++ +   DD  K 
Sbjct: 118 GALLERAVFNFFLDENVKAGYTEVIPPYLVNYDSMQGTGQFPKFTEDVYTIVDNDDPDKP 177

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFT 387
            R   L P      V  F   +   ++LP+ +      +R+E   +     GL+R+  F 
Sbjct: 178 -RELTLIPTAEVPLVNYFRDKILDIKQLPINVTAMSPAFRSEAGSAGRDTRGLIRMHEFR 236

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +    C ++  + E  K+      + +       +V LST              +W  
Sbjct: 237 KVEMVKICDEDSSWQELDKLTKNAEHLLQKLELPYHVVALSTGDASFTSAKTYDLEVWMP 296

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 297 AQNQYREI 304


>gi|291530562|emb|CBK96147.1| alanyl-tRNA synthetase [Eubacterium siraeum 70/3]
          Length = 878

 Score = 68.3 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 28/144 (19%), Positives = 58/144 (40%), Gaps = 8/144 (5%)

Query: 55  REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIED-GFYYDFDKEQP 113
            + S++    E  R      H+CAH++  A++ +  +     G  ++     +DF     
Sbjct: 544 TDDSVKSAVDEKKRMATARNHTCAHLLQAALRKVLGDHVHQAGSFVDPYRCRFDFSHFSA 603

Query: 114 FSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTL 173
            + +EL +IE  + + I    P + + L  E+AR+         K   +  +    +V+ 
Sbjct: 604 VTPEELEKIEMLVNDWILAGIPVVTEELPIEEARKKGAMALFGEKYGDIVRVVQAGDVS- 662

Query: 174 YRQGEWFDLCRGPHVRSTGQVKKF 197
                  + C G H+ +T +   F
Sbjct: 663 ------TEFCGGTHLDNTAKAGLF 680


>gi|171920478|ref|ZP_02931777.1| seryl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC 27813]
 gi|171902936|gb|EDT49225.1| seryl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC 27813]
          Length = 418

 Score = 68.3 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 39/243 (16%), Positives = 83/243 (34%), Gaps = 21/243 (8%)

Query: 222 GTAWNTQQELTQYLYFLEESE-KRDHRKLAREMDLFHIAEDG----SGVIFWHRKGWKIF 276
           G   N   E+ +     + +     H  LA +  L    +      S  I +   G +++
Sbjct: 116 GNDENDNVEIKKVFEPKKFNFLPLAHWDLAVKNKLIDFDKSTKITGSRFIIYTNFGARLY 175

Query: 277 QTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFA 335
           + L  + +   +K  + EI  P +++Q     SG+   +  ++F +        +   + 
Sbjct: 176 RALQQFCLDMNVKAGFSEIWAPVIVNQESLIGSGNLPKFADDLFKL--------ENSNYY 227

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAH 392
           L P        +  + +    +LP+        +R+E   +   + G++R   F + +  
Sbjct: 228 LSPTAEVQLTNLHRNEILKASDLPLYYTALTPCFRSEAGSAGRDVRGVIRQHQFHKVELV 287

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIM 448
             C  E  F E   +     SI +        + L T              +W  + N  
Sbjct: 288 KLCKPEDSFKELESMTRQAESILEALELPYRRIVLCTGDLGFSSAKTYDLEVWLPSYNAY 347

Query: 449 KGV 451
           K +
Sbjct: 348 KEI 350


>gi|315026714|gb|EFT38646.1| seryl-tRNA synthetase [Enterococcus faecalis TX2137]
          Length = 423

 Score = 68.3 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 36/223 (16%), Positives = 86/223 (38%), Gaps = 21/223 (9%)

Query: 242 EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEIN 295
           E + H ++   + +          GS  +++   G ++ + + +++  +  +   Y E+ 
Sbjct: 136 EPKPHWEIGEALGILDFERGAKVSGSRFLYYKGLGARLERAVYNFLLDQHVNEHGYTEVI 195

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
            P +++      +G +  ++ ++F V  +D T+         P         +N+ +   
Sbjct: 196 PPYLVNSKAMFGTGQFPKFKEDVFQVAESDLTLI--------PTAEVPLTNYYNNEILDA 247

Query: 356 RELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
           +ELP+        +R+E   +     GL+R+  F + +   F   E  + E  K+ N   
Sbjct: 248 QELPIYFTALSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVRFSDAEHSYEELEKMTNNAG 307

Query: 413 SIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
            I +  G    ++ LST              +W  A+   + +
Sbjct: 308 DILEKLGLPYRVITLSTGDMGFSAAKTYDLEVWIPAQKTYREI 350


>gi|170583217|ref|XP_001896481.1| hypothetical protein Bm1_25105 [Brugia malayi]
 gi|158596302|gb|EDP34673.1| hypothetical protein Bm1_25105 [Brugia malayi]
          Length = 304

 Score = 68.3 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 43/199 (21%), Positives = 74/199 (37%), Gaps = 24/199 (12%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEII-------TPEDPRSLAV 72
           +T  D  + ISR  A +      NG    + + +  +G +  +          +  ++  
Sbjct: 56  STFHDCMKHISRLKADRMALAYANGSYKSVLEKLSGDGRMMPLGYNXQNKNHANAVNMVA 115

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPII----EDGFYY-----DFDKEQPFSSDELAQIE 123
              SCA ++   V   +      +GP         F Y     D     P S +  A  E
Sbjct: 116 YWRSCAFLLGAVVDQAFAVDVQLVGPSKVDYHSGRFEYIAKIKDLHDWAPNSENLFALTE 175

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIP-----AKENVTLYRQGE 178
           K + E I +       ++S E A +L        K E+L  I       ++ V +YR G+
Sbjct: 176 KVVGEYITKALVIEPLFVSLEFALDL--FDSNISKQELLHEIKQETDNGEQGVIIYRMGD 233

Query: 179 WFDLCRGPHVRSTGQVKKF 197
           + D+  GP +  T  + KF
Sbjct: 234 FVDITYGPLIPCTSHIDKF 252


>gi|32033510|ref|ZP_00133837.1| COG0172: Seryl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|126208344|ref|YP_001053569.1| seryl-tRNA synthetase [Actinobacillus pleuropneumoniae L20]
 gi|166200593|sp|A3N0M8|SYS_ACTP2 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|126097136|gb|ABN73964.1| seryl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 5b
           str. L20]
          Length = 435

 Score = 68.3 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 63/190 (33%), Gaps = 11/190 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK--CADDTI 328
            ++ + L  +M     +   Y E N P +++      +G    +  ++F  +     D  
Sbjct: 171 ARLHRALSQFMLDLHTEQHGYVETNVPFLVNHDTLFGTGQLPKFGEDLFHTQPLTGQDPN 230

Query: 329 KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRG 385
           +  R F+L P        +    +     LP+R       +R+E         GL+R+  
Sbjct: 231 ETQRPFSLIPTAEVPVTNLVRDEIIDENSLPLRYTAHTPCFRSEAGSYGRDTRGLIRMHQ 290

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALW 441
           F + +       E+      ++      + +  G     V L T              +W
Sbjct: 291 FEKVEMVQIVAPEKSMEALEELTGHAEKVLQLLGLPYRKVLLCTGDMGFGSAKTYDLEVW 350

Query: 442 DDAENIMKGV 451
             A+N  + +
Sbjct: 351 LPAQNTYREI 360


>gi|323490216|ref|ZP_08095433.1| seryl-tRNA synthetase [Planococcus donghaensis MPA1U2]
 gi|323396112|gb|EGA88941.1| seryl-tRNA synthetase [Planococcus donghaensis MPA1U2]
          Length = 424

 Score = 68.3 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 38/246 (15%), Positives = 93/246 (37%), Gaps = 22/246 (8%)

Query: 220 IYGTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWK 274
            +G + +  +E+  +        E + H  L  ++++          GS  +F+   G +
Sbjct: 113 PFGDSEDDNEEIRTWGDKPAFDFEVKPHWDLGTDLNIIDFERAAKVTGSRFVFYRGLGAR 172

Query: 275 IFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           + + LI++M    ++   YEE+  P ++++     +G    +  + F +        +  
Sbjct: 173 LERALINFMMDLHQEEHGYEEMLPPYMVNRESLTGTGQLPKFEEDAFLI--------EKE 224

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQD 389
            + L P +       +   + +   LP   A + S +R+E   +     GL+R   F + 
Sbjct: 225 DYFLIPTSEVPVTNFYRDEILTADMLPQAFASYSSNFRSEAGSAGRDTRGLIRQHQFNKV 284

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAE 445
           +   F   E  ++E  K+      + +  G    ++K+ T              +W  ++
Sbjct: 285 ELVRFVKPEDSYDELEKLTGHAEKVLQLLGLPYRVLKMCTADLGFTAAKKYDIEVWIPSQ 344

Query: 446 NIMKGV 451
              + +
Sbjct: 345 ETYREI 350


>gi|288930008|ref|ZP_06423849.1| glycine--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108]
 gi|288328667|gb|EFC67257.1| glycine--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108]
          Length = 513

 Score = 68.3 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 54/345 (15%), Positives = 106/345 (30%), Gaps = 54/345 (15%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+                 L+P    G    + +  K+   ++P  +A+ G  +RNE  
Sbjct: 194 FNLMFSTEMGSLSDAASKIYLRPETAQGIFVNYLNVQKTGRMKVPFGIAQIGKAFRNEIV 253

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
            +   + R+R F Q +   F T   E  +    K   +       FG E        +  
Sbjct: 254 -ARQFIFRMREFEQMEMQFFVTPGTELDWFHKWKETRMKWHQALGFGAENYRFHDHEKLA 312

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
                                   +  + R+  G    EG      F+            
Sbjct: 313 HYAN------------------AASDIEFRMPFGFKEVEGIHSRTDFD------------ 342

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK--------- 543
              +        +   ++    +E   P +I  ++ G    F+ +M   F+         
Sbjct: 343 ---LSQHEKFSGKSIKYFDPQTNESYTPYVIETSI-GVDRMFLSVMCHAFEEEKLENGET 398

Query: 544 ---GNLPLWLSPIQAIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
                LP  L+P++  V  +       E A+EI N LK    +   D ++ TI  + R  
Sbjct: 399 RTVLKLPAALAPVKLAVLPLVKKDGLPEKAREIVNNLK-FKFNTHYDEKD-TIGKRYRRQ 456

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
                P  +       ++  + +R   +   ++V++     I+  
Sbjct: 457 DAIGTPYCVTVDHDTLTDNCVTLRFRDNMQQERVNIDQLENIIED 501


>gi|220919010|ref|YP_002494314.1| alanyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219956864|gb|ACL67248.1| alanyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 905

 Score = 68.3 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 34/142 (23%), Positives = 63/142 (44%), Gaps = 9/142 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFS 115
            ++E+   +  R L    HS  H++  A++ +  E     G ++  D   +DF   QP +
Sbjct: 577 DAVELAVDDRRRDLVRANHSATHLLQFALREVLGEHVKQAGSVVAPDYLRFDFSHFQPVT 636

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            +ELA +E+++ +++  ++      L  E+AR          K          + V + R
Sbjct: 637 EEELAAVERRVNDLVRENAETETAVLKLEEARHAGAMMIFGEKY--------GDVVRVVR 688

Query: 176 QGEWFDLCRGPHVRSTGQVKKF 197
            G   +LC G HVR +G +  F
Sbjct: 689 IGPSKELCGGTHVRRSGDIAFF 710


>gi|299542086|ref|ZP_07052402.1| seryl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
 gi|298725401|gb|EFI66049.1| seryl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
          Length = 426

 Score = 68.3 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 45/355 (12%), Positives = 115/355 (32%), Gaps = 44/355 (12%)

Query: 107 DFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIP 166
           DF+       + +A+ E    E             + E A E+    ++     + + I 
Sbjct: 30  DFEDLDAKRRELIAKTEDLKAERNKVSEQISVMKRNKENADEVITRMRQ-----VGDEIK 84

Query: 167 AKENVTLYRQGEWFDLCRG-PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAW 225
             +      +  + D+    P++          +   V    W             G   
Sbjct: 85  ELDVQLNDVEERFKDMMMRLPNIPHESVPVGTTEDDNVEEYTW-------------GEIP 131

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
               ++  +     + +  D  + A+           S  +F+   G ++ + L+++M  
Sbjct: 132 TFDFDIKAHWDLATDLKIVDFERGAKVTG--------SRFLFYRGLGARLERALMTFMMD 183

Query: 286 KIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPG 343
              +   YEE+  P ++++     +G    +  ++F +        +   + + P     
Sbjct: 184 LHAEEHGYEEMLPPVIVNRDSLTGTGQLPKFEEDVFKL--------EETDYFMIPTAEVP 235

Query: 344 HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQM 400
               +   +     LP   A + + +R+E   +     GL+R   F + +   F   E+ 
Sbjct: 236 VTNFYRDEILPAEALPQGFAAYSACFRSEAGSAGRDTRGLIRQHQFNKVELVRFVKPEES 295

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENIMKGV 451
           + +   + +    + +  G     +K+ T              +W  A+N+ + +
Sbjct: 296 YEQLELLTSHAEKVLQLLGLPYRKLKMCTADLGFTAAKKYDLEVWIPAQNMYREI 350


>gi|229188301|ref|ZP_04315352.1| Seryl-tRNA synthetase [Bacillus cereus ATCC 10876]
 gi|228595169|gb|EEK52937.1| Seryl-tRNA synthetase [Bacillus cereus ATCC 10876]
          Length = 424

 Score = 68.3 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 40/223 (17%), Positives = 83/223 (37%), Gaps = 21/223 (9%)

Query: 242 EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEIN 295
           E + H  LA ++ +          GS  +F+   G ++ + LIS+M     D   YEE+ 
Sbjct: 136 EPKPHWDLATDLGILDFERAGKVTGSRFVFYKGAGARLERALISFMLDLHTDEHGYEEVL 195

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
            P ++++     +G    +  + F +        +   + L P        +    + + 
Sbjct: 196 PPYMVNRASMTGTGQLPKFEEDAFRI--------ESEDYFLIPTAEVPVTNMHRDEILNK 247

Query: 356 RELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
            +LP+R A F S +R+E   +     GL+R   F + +   F   E  + E  K+ N   
Sbjct: 248 EQLPIRYAAFSSCFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYEELEKLTNDAE 307

Query: 413 SIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENIMKGV 451
            + +       ++ + T              +W  +    + +
Sbjct: 308 RVLQLLELPYRVMSMCTGDLGFTAAKKYDIEVWIPSYGTYREI 350


>gi|51598627|ref|YP_072815.1| glycyl-tRNA synthetase [Borrelia garinii PBi]
 gi|59798510|sp|Q661P8|SYG_BORGA RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|51573198|gb|AAU07223.1| glycyl-tRNA synthetase [Borrelia garinii PBi]
          Length = 445

 Score = 68.3 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 63/432 (14%), Positives = 126/432 (29%), Gaps = 70/432 (16%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKDDYEEIN---TPQVLDQHLWQQSGHWDSYRANMF 319
           SG   +   G ++ + + S   + +   +E I    +   +   +W+ SGH D +  +M 
Sbjct: 28  SGAWDYGPLGVELKKNIKSEWWKSMVYLHENIVGLDSAIFMRPEIWRASGHIDGFSDSMV 87

Query: 320 AVKCADDTIKDL--------------------------------------RTFALKPMNC 341
             K      +                                            L+P   
Sbjct: 88  DCKDCKSRFRADFIDLSKNCPNCKVGNNFTSPRSFNLMFKTHIGVVEDSSSEIYLRPETA 147

Query: 342 PGHVAVFNHGLKSYR-ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQ 399
            G    F + L S R ++P  +A+ G  +RNE   + + + R   F Q +   F    + 
Sbjct: 148 QGIFVNFRNVLDSSRLKIPFGIAQVGKAFRNEIV-TKNFIFRTCEFEQMEMQFFVHPKQI 206

Query: 400 MFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSS 459
               C    N +    +        ++       ++   A         K   D      
Sbjct: 207 DEWFCYWQQNRMNFFIETLKIRPDKLRFKAHDSTQLAHYA---------KSAFDI----- 252

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
           +     G    EG      ++         + +      D     R+    + + +    
Sbjct: 253 EYEFPFGFQEVEGIHNRGNYDLTQHSKFSNNPKIFEYH-DLLTKERYVPHVIETSAGLTR 311

Query: 520 PVMIHRAVFGSIERFIGIMIENFK---GNLPLWLSPIQAIVTTITSSA--VEYAQEIANL 574
            V++      S E     + +  K     L   L+P +  +  +      VE A+ I   
Sbjct: 312 SVLMTLCNAYSEEE----LSDGDKRIVLRLHPKLAPYKIAIFPLVKKVELVEIARRIYIE 367

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           L      I  D    TI  + R       P  +        + ++ +R   + T +++ +
Sbjct: 368 LCD-DFHIFYDDSG-TIGKRYRRQDEIGTPYCVTVDYSTIEDETVTVRERNNMTQKRIFI 425

Query: 635 LDAIPILTKESL 646
            D    +  E L
Sbjct: 426 NDLYSYIKTEIL 437


>gi|320104779|ref|YP_004180370.1| glycyl-tRNA synthetase [Isosphaera pallida ATCC 43644]
 gi|319752061|gb|ADV63821.1| glycyl-tRNA synthetase [Isosphaera pallida ATCC 43644]
          Length = 513

 Score = 68.3 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 50/322 (15%), Positives = 102/322 (31%), Gaps = 47/322 (14%)

Query: 335 ALKPMNCPGHVAVFNHGLKSYR-ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
            L+P    G  A F +   + R ++P  +A+ G  +RNE +   +   R R F Q +   
Sbjct: 202 YLRPETAQGIFANFKNVCDTTRLKIPFGIAQIGKSFRNEINPR-NFTFRSREFEQMEIEF 260

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
           FC  ++         +   + Y   G     ++L       +   A +  A   +     
Sbjct: 261 FCHPDEAATWYRYWRDARFAWYVRHGLRSDRLRLRDHDPAEL---AFYSTATADI----- 312

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS 513
                 +     GV   EG  +   ++                       S  +  Y + 
Sbjct: 313 ------EYAFPFGVSELEGIAHRGDYDLT----------------QHQKFSGKDLSYFDD 350

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIMIENFK-----------GNLPLWLSPIQAIVTTI-- 560
            +++     +     G+    +  + E +                  L+PI+A V  +  
Sbjct: 351 ETKQRFVPHVIEPSAGADRATLAFLCEAYHEDEVGGEARTVLKFHPRLAPIKAAVLPLVK 410

Query: 561 TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
                E A +I   LK+H  ++  D +   I  + R       P  +    +   + ++ 
Sbjct: 411 KDGMPEMAAKIYRELKTH-YNVFYDEKGA-IGRRYRRQDEVGTPFCLTIDGQSLQDGTVT 468

Query: 621 IRRFGSTTTQKVSLLDAIPILT 642
           IR        +V   + + +L 
Sbjct: 469 IRDRDDCRQWRVPSANIVGVLA 490


>gi|238022770|ref|ZP_04603196.1| hypothetical protein GCWU000324_02681 [Kingella oralis ATCC 51147]
 gi|237865973|gb|EEP67109.1| hypothetical protein GCWU000324_02681 [Kingella oralis ATCC 51147]
          Length = 430

 Score = 68.3 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 40/222 (18%), Positives = 78/222 (35%), Gaps = 14/222 (6%)

Query: 242 EKRDHRKLAREMDL-FHIAEDGSGVIFWHRKG--WKIFQTLISYMRRKI--KDDYEEINT 296
           E +DH  L   + L F  A + SG  F   KG   ++ + L  +M      +  Y E  T
Sbjct: 137 EVKDHVDLGAALGLDFEKAAELSGARFSLMKGKVARLHRALAQFMLDTHTQQHGYTECYT 196

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P ++       +G    +  ++F V    D  K  +     P        +    + + +
Sbjct: 197 PYIVSDAALLGTGQLPKFAEDLFHVTRGGDESKLSQYLI--PTAEVTLTNIVRDTIVAEK 254

Query: 357 ELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           +LP++       +R+E         GL+R   F + +       E  +    ++ +   +
Sbjct: 255 DLPLKFTAHSPCFRSEAGSHGKDTRGLIRQHQFDKVEMVQVVQPENSYAALEEMVSHAEN 314

Query: 414 IYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
           I K       ++ L T              +W  A+N  + +
Sbjct: 315 ILKLLELPYRVITLCTGDMGFGAAKTYDLEVWVPAQNTYREI 356


>gi|196039347|ref|ZP_03106653.1| histidine--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|196029974|gb|EDX68575.1| histidine--tRNA ligase [Bacillus cereus NVH0597-99]
          Length = 476

 Score = 68.3 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 75/465 (16%), Positives = 151/465 (32%), Gaps = 64/465 (13%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWK--------IFQTLISY 282
              Y   +   +  +       + L    E+   +     +G +        ++Q +   
Sbjct: 21  HHGYNTLVPTVQTVEAGVFLFLLRLKQFEEEL-NMSIQIPRGTQDILPGTVELWQYIEGQ 79

Query: 283 MRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPM-N 340
            R   +  +Y+EI TP        +          ++   +      +  R+  L+P   
Sbjct: 80  AREICRRYNYKEIRTPIF---EHTELFLRGVGDTTDIVQKEMYSFQDRGERSLTLRPEGT 136

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
            P   +   + +      P +L   G ++R E   +     R R F Q       + +  
Sbjct: 137 APVVRSYVENKMFGDATQPTKLYYIGQMFRYERPQA----GRYRQFVQFGIEAIGSNDPA 192

Query: 401 FNECLKIHNLIISIYKDFGFEKI---MVKLSTRPEKRVGSDALWDDAENIMKG------- 450
            +   ++  L +  Y+  G + I   +  L     ++   DAL    E  +         
Sbjct: 193 IDA--EVIALAVEFYRGMGLKNIKVVLNSLGDAASRQAHRDALIAHFEPRIGEFCSDCQS 250

Query: 451 --------VLDTIKNSSQDRINT-----GVLLGEGAFYGPK-----------FEYILKDA 486
                   +LD  K+ + + + T       L  + A Y  K           FE      
Sbjct: 251 RLEKNPLRILDCKKDRNHELMGTAPSITEYLNEDSAVYYDKVQELLTMMDVPFEKDPNLV 310

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHS--------EKCHPVMIHRAVFGSIERFIGIM 538
            G D+   T+    +    F A    S          E   P M       SIER I  +
Sbjct: 311 RGLDYYQHTVFEIMSEAEGFGAITTLSGGGRYNGLVQEIGGPEMPGIGFAMSIERLIMAL 370

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
            +     LP+    I   V  +   A ++A ++A  L+   LS+E D+ +  +  + +  
Sbjct: 371 -KAENIELPIE-HSIDCYVVALGEKAKDHAAKVAFDLRKAGLSVEKDYLDRKMKAQFKSA 428

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              K   + + G+ E  +  I ++   +   ++V+L      + +
Sbjct: 429 DRLKAKFVAVLGEDELDKGIINLKNMATGEQEEVALDVFASYVAE 473


>gi|325953928|ref|YP_004237588.1| glycyl-tRNA synthetase [Weeksella virosa DSM 16922]
 gi|323436546|gb|ADX67010.1| glycyl-tRNA synthetase [Weeksella virosa DSM 16922]
          Length = 511

 Score = 68.3 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 54/354 (15%), Positives = 111/354 (31%), Gaps = 53/354 (14%)

Query: 308 SGHWDSYRA-NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEF 365
           S +W   R  N+        T +      L+P    G    + +  K+   +LP  +A+ 
Sbjct: 184 SKNWTEVRQFNLMFGTKLGATAEQAMDLYLRPETAQGIFLNYLNVQKTGRMKLPFGIAQI 243

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
           G  +RNE   +   + R R F Q +   F       +   K     +  +K  G      
Sbjct: 244 GKAFRNEIV-ARQFIFRQREFEQMEMQFFVKPGTELDWYEKWKETRLKWHKSLGLGDDNY 302

Query: 426 KLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKD 485
           +     +    ++A  D                 + R   G    EG     + ++ LK 
Sbjct: 303 RFHDHEKLAHYANAATDI----------------EFRFPFGFKELEGIH--SRTDFDLK- 343

Query: 486 AIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
                +    +Q   N             +E   P ++  +V   ++R    +  N    
Sbjct: 344 -AHEKFSGKKLQYFDN-----------ETNESYVPYVVETSV--GLDRLFLAVFSNSLRE 389

Query: 546 LPLWLSPIQAIV---------------TTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
             L     + ++                       E A+EI   L+ +  ++  + ++ +
Sbjct: 390 EELADGTQRVVLALPAAIAPIKAAILPLVKKDGLPELAEEIVRKLR-YDFNVMYEEKD-S 447

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           I  + R       P  I        + ++ +R   +   ++V++ D   I+  E
Sbjct: 448 IGKRYRRMDAIGTPFCITVDHDSLKDNTVTLRHRDTMEQKRVAISDLPAIIDAE 501


>gi|315640401|ref|ZP_07895513.1| serine--tRNA ligase [Enterococcus italicus DSM 15952]
 gi|315483839|gb|EFU74323.1| serine--tRNA ligase [Enterococcus italicus DSM 15952]
          Length = 426

 Score = 68.3 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 51/344 (14%), Positives = 116/344 (33%), Gaps = 33/344 (9%)

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ-GEWFD 181
           E K+ E +  D    +  +  E+ ++                  A E +   +Q G+   
Sbjct: 25  EDKINEFVGLDEERRRLLVETEELKKHRNDVSAEIAQLKRTKEDATEKIEEMKQVGQKIK 84

Query: 182 LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES 241
              G                K+        +       I G       E+ ++    E  
Sbjct: 85  ELDGTL---------ATIDEKLTQIAVTLPNIPDDSVPI-GADEEDNVEVRRWHKTREFD 134

Query: 242 -EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRRK--IKDDYEEI 294
            E + H ++A ++ +          GS  +++   G ++ + L ++M      +  Y E+
Sbjct: 135 FEPKPHWEVAEDLGILDFERGAKVSGSRFVYYKGLGARLERALYNFMLDLHVYEQGYTEM 194

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
            TP +++      +G +  ++ ++F ++  D T+         P         ++  +  
Sbjct: 195 ITPYIVNSQAMFGTGQFPKFKEDVFQLENTDLTLI--------PTAEVPLTNFYSQEILD 246

Query: 355 YRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI 411
            ++LP+        +R+E   +     GL+R+  F + +   F   +  + E  K+    
Sbjct: 247 EKDLPIYFTALSPSFRSEAGSAGRDTRGLIRLHQFNKVEMVKFSDADHSYEELEKMTQNA 306

Query: 412 ISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
             I +       +V LST              +W  A+N  + +
Sbjct: 307 EEILQKLELPYRVVALSTGDMGFSAAKTYDLEVWIPAQNTYREI 350


>gi|256618437|ref|ZP_05475283.1| seryl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|256761947|ref|ZP_05502527.1| seryl-tRNA synthetase [Enterococcus faecalis T3]
 gi|257084092|ref|ZP_05578453.1| seryl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|257088576|ref|ZP_05582937.1| seryl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|300862206|ref|ZP_07108286.1| serine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|307276339|ref|ZP_07557465.1| seryl-tRNA synthetase [Enterococcus faecalis TX2134]
 gi|312903849|ref|ZP_07763021.1| seryl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|256597964|gb|EEU17140.1| seryl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|256683198|gb|EEU22893.1| seryl-tRNA synthetase [Enterococcus faecalis T3]
 gi|256992122|gb|EEU79424.1| seryl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|256997388|gb|EEU83908.1| seryl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|295112414|emb|CBL31051.1| seryl-tRNA synthetase [Enterococcus sp. 7L76]
 gi|300848731|gb|EFK76488.1| serine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|306507004|gb|EFM76148.1| seryl-tRNA synthetase [Enterococcus faecalis TX2134]
 gi|310632793|gb|EFQ16076.1| seryl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|315143211|gb|EFT87227.1| seryl-tRNA synthetase [Enterococcus faecalis TX2141]
 gi|315160827|gb|EFU04844.1| seryl-tRNA synthetase [Enterococcus faecalis TX0645]
 gi|315171391|gb|EFU15408.1| seryl-tRNA synthetase [Enterococcus faecalis TX1342]
 gi|315577010|gb|EFU89201.1| seryl-tRNA synthetase [Enterococcus faecalis TX0630]
          Length = 423

 Score = 68.3 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 37/223 (16%), Positives = 86/223 (38%), Gaps = 21/223 (9%)

Query: 242 EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEIN 295
           E + H ++   + +          GS  +++   G ++ + + ++M  +  +   Y E+ 
Sbjct: 136 EPKPHWEIGEALGILDFERGAKVSGSRFLYYKGLGARLERAVYNFMLDQHVNEHGYTEVI 195

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
            P +++      +G +  ++ ++F V  +D T+         P         +N+ +   
Sbjct: 196 PPYLVNSKAMFGTGQFPKFKEDVFQVAESDLTLI--------PTAEVPLTNYYNNEILEA 247

Query: 356 RELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
           +ELP+        +R+E   +     GL+R+  F + +   F   E  + E  K+ N   
Sbjct: 248 QELPIYFTALSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFSDAEHSYEELEKMTNNAG 307

Query: 413 SIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
            I +  G    ++ LST              +W  A+   + +
Sbjct: 308 DILEKLGLPYRVITLSTGDMGFSAAKTYDLEVWIPAQKTYREI 350


>gi|228905813|ref|ZP_04069712.1| Seryl-tRNA synthetase [Bacillus thuringiensis IBL 200]
 gi|228853821|gb|EEM98579.1| Seryl-tRNA synthetase [Bacillus thuringiensis IBL 200]
          Length = 424

 Score = 68.3 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 40/223 (17%), Positives = 83/223 (37%), Gaps = 21/223 (9%)

Query: 242 EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEIN 295
           E + H  LA ++ +          GS  +F+   G ++ + LIS+M     D   YEE+ 
Sbjct: 136 EPKPHWDLATDLGILDFERAGKVTGSRFVFYKGAGARLERALISFMLDLHTDEHGYEEVL 195

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
            P ++++     +G    +  + F +        +   + L P        +    + + 
Sbjct: 196 PPYMVNRASMTGTGQLPKFEEDAFRI--------ESEDYFLIPTAEVPVTNMHRDEILNK 247

Query: 356 RELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
            +LP+R A F S +R+E   +     GL+R   F + +   F   E  + E  K+ N   
Sbjct: 248 EQLPIRYAAFSSCFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYEELEKLTNDAE 307

Query: 413 SIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENIMKGV 451
            + +       ++ + T              +W  +    + +
Sbjct: 308 RVLQLLELPYRVMSMCTGDLGFTAAKKYDIEVWIPSYGTYREI 350


>gi|229074077|ref|ZP_04207126.1| Seryl-tRNA synthetase [Bacillus cereus Rock4-18]
 gi|229094737|ref|ZP_04225745.1| Seryl-tRNA synthetase [Bacillus cereus Rock3-29]
 gi|229100803|ref|ZP_04231621.1| Seryl-tRNA synthetase [Bacillus cereus Rock3-28]
 gi|229113691|ref|ZP_04243128.1| Seryl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|228669757|gb|EEL25162.1| Seryl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|228682610|gb|EEL36669.1| Seryl-tRNA synthetase [Bacillus cereus Rock3-28]
 gi|228688675|gb|EEL42545.1| Seryl-tRNA synthetase [Bacillus cereus Rock3-29]
 gi|228709040|gb|EEL61164.1| Seryl-tRNA synthetase [Bacillus cereus Rock4-18]
          Length = 424

 Score = 68.3 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 75/200 (37%), Gaps = 17/200 (8%)

Query: 261 DGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANM 318
            GS  +F+   G ++ + LIS+M     D   YEE+  P ++++     +G    +  + 
Sbjct: 159 TGSRFVFYKGAGARLERALISFMLDLHTDEHGYEEVLPPYMVNRASMTGTGQLPKFEEDA 218

Query: 319 FAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS-- 376
           F +        +   + L P        +    + +  +LP+R A F S +R+E   +  
Sbjct: 219 FRI--------ESEDYFLIPTAEVPVTNMHRDEILNKEQLPIRYAAFSSCFRSEAGSAGR 270

Query: 377 -LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
              GL+R   F + +   F   E  + E  K+ N    + +       ++ + T      
Sbjct: 271 DTRGLIRQHQFNKVELVKFVKPEDSYEELEKLTNDAERVLQLLELPYRVMSMCTGDLGFT 330

Query: 436 ----GSDALWDDAENIMKGV 451
                   +W  +    + +
Sbjct: 331 AAKKYDIEVWIPSYGTYREI 350


>gi|88807545|ref|ZP_01123057.1| seryl-tRNA synthetase [Synechococcus sp. WH 7805]
 gi|88788759|gb|EAR19914.1| seryl-tRNA synthetase [Synechococcus sp. WH 7805]
          Length = 425

 Score = 68.3 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 51/351 (14%), Positives = 103/351 (29%), Gaps = 64/351 (18%)

Query: 220 IYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDL----FHIAEDGSGVIFWHRKGWKI 275
             G   N   E+  +     +    +H  +A  + L      +    S  +    +G ++
Sbjct: 117 PDGRDENDNIEIRAWGDPRRQEGLEEHWAIADRLGLLDSERSVRIAQSRFVTLFGQGARL 176

Query: 276 FQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
            + LI++M        Y E+  P +++      SG    +    F     D         
Sbjct: 177 ERALINFMLDLHTGKGYREVLPPVLVNSASLTGSGQLPKFAEESFRCADDD--------L 228

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDA 391
            L P       ++    +    +LP+R   +   +R E         GL+R+  F + + 
Sbjct: 229 WLTPTAEVPLTSLHRDEIIPADQLPLRYVAYSPCFRREAGSYGRDTRGLIRLHQFNKVEL 288

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP----EKRVGSDALWDDAENI 447
           + F   +        I     ++ +       +++L T        R     +W      
Sbjct: 289 YWFVHPDHAHEAHAAITADAEAVLQALELPYRVLELCTGDLGFSAARTYDLEVW------ 342

Query: 448 MKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFN 507
                               L G GA+              R+    ++  DF       
Sbjct: 343 --------------------LAGAGAY--------------REISSCSVCGDFQARR--- 365

Query: 508 AFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVT 558
           +       +    V        +I R +  ++EN +      L P QA++ 
Sbjct: 366 SSIRTKDGKATRLVHTLNGSGLAIGRTMAALLENGQQADGSVLLP-QALIP 415


>gi|206978343|ref|ZP_03239217.1| seryl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217957593|ref|YP_002336135.1| seryl-tRNA synthetase [Bacillus cereus AH187]
 gi|222093786|ref|YP_002527834.1| seryl-tRNA synthetase [Bacillus cereus Q1]
 gi|228983272|ref|ZP_04143487.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
 gi|229136860|ref|ZP_04265489.1| Seryl-tRNA synthetase [Bacillus cereus BDRD-ST26]
 gi|229153796|ref|ZP_04281928.1| Seryl-tRNA synthetase [Bacillus cereus ATCC 4342]
 gi|226701626|sp|B7HPS8|SYS_BACC7 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|254783006|sp|B9IYI0|SYS_BACCQ RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|206743435|gb|EDZ54868.1| seryl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217068054|gb|ACJ82304.1| seryl-tRNA synthetase [Bacillus cereus AH187]
 gi|221237832|gb|ACM10542.1| serine--tRNA ligase (seryl-tRNA synthetase) [Bacillus cereus Q1]
 gi|228629665|gb|EEK86360.1| Seryl-tRNA synthetase [Bacillus cereus ATCC 4342]
 gi|228646595|gb|EEL02800.1| Seryl-tRNA synthetase [Bacillus cereus BDRD-ST26]
 gi|228776452|gb|EEM24803.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
          Length = 424

 Score = 68.3 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 40/223 (17%), Positives = 83/223 (37%), Gaps = 21/223 (9%)

Query: 242 EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEIN 295
           E + H  LA ++ +          GS  +F+   G ++ + LIS+M     D   YEE+ 
Sbjct: 136 EPKPHWDLATDLGILDFERAGKVTGSRFVFYKGAGARLERALISFMLDLHTDEHGYEEVL 195

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
            P ++++     +G    +  + F +        +   + L P        +    + + 
Sbjct: 196 PPYMVNRASMTGTGQLPKFEEDAFRI--------ESEDYFLIPTAEVPVTNMHRDEILNK 247

Query: 356 RELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
            +LP+R A F S +R+E   +     GL+R   F + +   F   E  + E  K+ N   
Sbjct: 248 DQLPIRYAAFSSCFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYEELEKLTNDAE 307

Query: 413 SIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENIMKGV 451
            + +       ++ + T              +W  +    + +
Sbjct: 308 RVLQLLELPYRVMSMCTGDLGFTAAKKYDIEVWIPSYGTYREI 350


>gi|295425887|ref|ZP_06818566.1| serine--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
 gi|295064429|gb|EFG55358.1| serine--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
          Length = 462

 Score = 68.3 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 87/222 (39%), Gaps = 13/222 (5%)

Query: 242 EKRDHRKLAREMDL----FHIAEDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINT 296
           + + H  +  ++D+          G+  +F+   G  + + + ++ +    K+ Y EI  
Sbjct: 163 KPKAHWDIGTDLDILDWNRASKVSGARFVFYKGAGALLERAVFNFFLDENTKEGYTEIIP 222

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +++    Q +G +  +  +++ +   DD  K  R   L P      V  F   +    
Sbjct: 223 PYLVNDASMQGTGQFPKFHEDVYTIVDNDDPDKP-RDLTLIPTAEVPLVNYFRDEIIHGE 281

Query: 357 ELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           +LP+ +      +R+E   +     GL+R+  F + +    C  E  +++  K+ +    
Sbjct: 282 KLPINVTALSPAFRSEAGSAGRDTRGLIRMHEFRKVEMVKVCKPEDSWDQLEKLTHNAEH 341

Query: 414 IYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
           + +  G    +V LST              +W   ++  + +
Sbjct: 342 LLQKLGLPYHVVALSTGDASFTSAKTYDLEVWMPYQDKYREI 383


>gi|329296669|ref|ZP_08254005.1| alanyl-tRNA synthetase [Plautia stali symbiont]
          Length = 875

 Score = 68.3 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 31/146 (21%), Positives = 58/146 (39%), Gaps = 10/146 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGF-YYDFDKEQPFS 115
             ++    E  RS  ++ HS  H+M EA++ +  +     G +  D +  +DF   +   
Sbjct: 546 DRLQAQVDEVRRSRIILNHSATHLMHEALRKVLGDHVGQKGSLNNDKYLRFDFSHGEAMK 605

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
             ++  +E  +   I R+ P     +  E+A+ L  +     K          + V +  
Sbjct: 606 PQQIRAVEDIVNAQIRRNLPITTNVMDLEEAKALGATALFGEKY--------DQRVRVVS 657

Query: 176 QGEW-FDLCRGPHVRSTGQVKKFFKL 200
            GE+  +LC G H   TG +  F   
Sbjct: 658 MGEYSIELCGGTHAARTGDIGLFRIQ 683


>gi|85858185|ref|YP_460387.1| alanyl-tRNA synthetase [Syntrophus aciditrophicus SB]
 gi|123515492|sp|Q2LPL7|SYA_SYNAS RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|85721276|gb|ABC76219.1| alanyl-tRNA synthetase [Syntrophus aciditrophicus SB]
          Length = 878

 Score = 68.3 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 37/165 (22%), Positives = 64/165 (38%), Gaps = 26/165 (15%)

Query: 46  KVCDLSDPVRE----------------GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIW 89
           +V D   P+                   S+ +I  ED R      HS  H++  A++++ 
Sbjct: 526 EVLDTRRPLDNLISHVGRVIKGRGRKGDSVNLIVAEDKRRATEANHSATHLLQAAMKTVM 585

Query: 90  PEVQVAIGP-IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE 148
                  G  +  +   +DF        +EL QIE     +I R+ P + + L  E+A +
Sbjct: 586 GNHIKQSGSLVTAERLRFDFTHFSKIEENELEQIENLANAVIRRNLPVVTRVLPLEEAMK 645

Query: 149 LFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTG 192
              +     K          E V + R G++  +LC G H++ TG
Sbjct: 646 TGATAVFDEKY--------GEKVRVVRMGDFSMELCGGTHIQRTG 682


>gi|37520285|ref|NP_923662.1| seryl-tRNA synthetase [Gloeobacter violaceus PCC 7421]
 gi|46577178|sp|Q7NMP9|SYS_GLOVI RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|35211278|dbj|BAC88657.1| seryl-tRNA synthetase [Gloeobacter violaceus PCC 7421]
          Length = 429

 Score = 68.3 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 40/243 (16%), Positives = 80/243 (32%), Gaps = 21/243 (8%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAED----GSGVIFWHRKGWKIF 276
           G   N  +E+  +        E   H  L   + L + A       +  +     G  + 
Sbjct: 121 GKDENDNREMRFWGTPPIFDFEPAAHWDLGERLGLMNFARATLVAQARFVTLMGDGALLE 180

Query: 277 QTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFA 335
           + LI++M  R     Y EI  P +++      +G    +  + F  +  D          
Sbjct: 181 RALIAFMLDRHRAHGYIEILPPYLVNTASMTGTGQLPKFAEDSFRCRDDD--------LW 232

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAH 392
           L P        ++   + +  +LP+    F   +R E         GL+R+  F + +  
Sbjct: 233 LIPTAEVPVTNLYRDEILTDMQLPIHHCAFTPCFRREAGSYGRDTRGLIRLHQFHKVELV 292

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG----SDALWDDAENIM 448
            FC  E    E  K+      + +       +++L T              +W  ++N  
Sbjct: 293 KFCRPEHSPTEHEKLVADAEDVLQQLELPYRVIELCTGDLGFGAARCFDLEVWLPSQNRY 352

Query: 449 KGV 451
           + +
Sbjct: 353 REI 355


>gi|167390116|ref|XP_001739217.1| uridine cytidine kinase I [Entamoeba dispar SAW760]
 gi|165897194|gb|EDR24431.1| uridine cytidine kinase I, putative [Entamoeba dispar SAW760]
          Length = 534

 Score = 68.3 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 45/237 (18%), Positives = 87/237 (36%), Gaps = 14/237 (5%)

Query: 2   PSDIK---LTFPDGSIKNFPVHATGSDVAESI-SRSLAK-KAVAVAINGKVCDLSDPVRE 56
           P DI    +TF DG+     +H     +   +   SL     V + +NG+V   +  +  
Sbjct: 20  PIDISKTVVTFTDGTQ---EIHTRPLHLTNLLTHPSLNNSDLVGIMVNGRVYSTNAIINI 76

Query: 57  GSI--EIITPEDPRSLAVIRHSCAHIMAEAVQSIWP-EVQVAIGPIIEDGFYYDFDKEQP 113
           G      +        ++ R S   + A A    +  +  V +   + +G+  +    + 
Sbjct: 77  GIANITPVFLNSYEGFSIYRRSLVMVFATAAFMTYGTKFGVTVEHHVNNGYCINKSNGKE 136

Query: 114 FSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTL 173
           F+ +E   I+ KM+E+I  +    +  LSH +A   F        + +L+S   +E    
Sbjct: 137 FTEEECNTIKNKMKELINENKEIKEVVLSHAEAINYFTETNRGMTLSLLKSTNNEEVKCS 196

Query: 174 YRQGEWFDLCRGPHVRSTGQVKKFFKL--MKVAGAYWRGDSNRPMLSRIYGTAWNTQ 228
           Y +G +  L   P +  TG +K F  +      G           + +        +
Sbjct: 197 YLEG-FMTLFIRPLLGRTGILKDFNLILGTDKTGMMLLFPQENKPIPKTIKEIETKK 252


>gi|288925143|ref|ZP_06419079.1| histidine--tRNA ligase [Prevotella buccae D17]
 gi|288338333|gb|EFC76683.1| histidine--tRNA ligase [Prevotella buccae D17]
          Length = 454

 Score = 68.3 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 26/199 (13%), Positives = 65/199 (32%), Gaps = 16/199 (8%)

Query: 445 ENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPS 504
              +   L+ +   +  +++  +  G   + G  FE    D        G          
Sbjct: 270 TRFILNTLELLGLKNDIQLDLTLARGLNYYTGAIFEVKALDVPMGSITGGG--------- 320

Query: 505 RFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP-LWLSPIQAIVTTITSS 563
           R++            P +    +    +R   ++  N     P   ++  Q +       
Sbjct: 321 RYDNLT----GIFGMPGLSGVGISFGADRIYDVL--NTLDLYPKEAVNSTQVLFINFGEQ 374

Query: 564 AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRR 623
              Y   I   ++   +  E    +  +  ++   + K IP +++ G+ E   R + ++ 
Sbjct: 375 ETAYCLPILKQVRDAGIRAEIYPDSAKMKKQMNYANAKGIPFVVLAGENEMQTRQVTLKN 434

Query: 624 FGSTTTQKVSLLDAIPILT 642
             +   ++VS  +AI  + 
Sbjct: 435 METGEQRQVSPAEAITCIQ 453


>gi|300775357|ref|ZP_07085219.1| serine--tRNA ligase [Chryseobacterium gleum ATCC 35910]
 gi|300506097|gb|EFK37233.1| serine--tRNA ligase [Chryseobacterium gleum ATCC 35910]
          Length = 422

 Score = 68.3 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 76/219 (34%), Gaps = 20/219 (9%)

Query: 245 DHRKLAREMDLFHIA----EDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQV 299
            H +LA++ +L          G+G   +  KG ++ + L+ Y + + ++  Y E+N P V
Sbjct: 142 PHWELAKKYNLIDFELGVKIAGAGFPVYLGKGARLQRALVQYFLDKNVEKGYTEVNPPHV 201

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           +++           +       K       +     L P        ++   L   ++LP
Sbjct: 202 VNE--------ASGFGTGQLPDKEGQMYYINEDKLYLIPTAEVPVTNLYRDVLFDEKDLP 253

Query: 360 VRLAEFGSVYRNEPSG---SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           V+   F   YR E       + GL R+  F + +       E  +    ++   I  I  
Sbjct: 254 VKNTAFSQCYRREAGSYGAHVRGLNRLHQFEKVEIVRIEKPENSYAVLEEMVEHIKEILT 313

Query: 417 DFGFEKIMVKLSTRPEKRV----GSDALWDDAENIMKGV 451
           D      +++L                +W  A+ +   V
Sbjct: 314 DLELPFRVLRLCGGDTGFASAMTYDFEVWSAAQEMWLEV 352


>gi|78188020|ref|YP_378358.1| glycyl-tRNA synthetase [Chlorobium chlorochromatii CaD3]
 gi|78170219|gb|ABB27315.1| glycyl-tRNA synthetase [Chlorobium chlorochromatii CaD3]
          Length = 489

 Score = 68.3 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 55/397 (13%), Positives = 121/397 (30%), Gaps = 63/397 (15%)

Query: 274 KIFQTLISYMRRKIKDDYEEINTPQVLDQHLWQQ------------SGHWDSYRANMFAV 321
           K+ +       ++++  YE + + +  ++ L++             S  W   R      
Sbjct: 124 KLRRDGKEEALQRVQATYEAVGSTEDSNRALYELILAEGIKAPDTGSADWTEVRQFNLMF 183

Query: 322 KCADDTIKDLRTFAL-KPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHG 379
           +C    + D       +P    G    F++    S  ++P  +A+ G  +RNE     + 
Sbjct: 184 QCNMGALSDRSGIVYLRPETAQGIFVNFHNVREASRMKVPFGIAQIGKAFRNEIVKG-NF 242

Query: 380 LMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY-KDFGFEKIMVKLSTRPEKRVGSD 438
             R+  F Q +   F                  + Y    G     +      +    +D
Sbjct: 243 TFRMVEFEQMEMQYFVKPGTQLEAFEAWREERFAWYVNSLGITPSKLHWYKHDKLAHYAD 302

Query: 439 ALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
             +D                 +     G+   EG     + ++ LK              
Sbjct: 303 LAYDI----------------KFEFPFGIEEIEGIH--SRTDFDLK-------------Q 331

Query: 499 DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI-----------ENFKGNLP 547
                 +   +   + +E+  P ++  +  G    F+ ++            E     L 
Sbjct: 332 HQEYSGKNMEYIDQTTNERYIPYVVETSA-GCDRLFLALLADAYTEDVVDGEERVVLRLA 390

Query: 548 LWLSPIQAIVTTITSS--AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPI 605
             ++P++A +  +       E A  + N L S    ++ D    +I  + R       P 
Sbjct: 391 PRVAPVKAAILPLMKKGGLGEKAMALCNELSSS-YLVQYDDAG-SIGKRYRRQDEIGTPF 448

Query: 606 IIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            I    +   + S+ +R   S   ++++L      L 
Sbjct: 449 CITVDHQSLEDESVTVRYRDSAAQERIALSRVQEFLA 485


>gi|283782116|ref|YP_003372871.1| glycyl-tRNA synthetase [Pirellula staleyi DSM 6068]
 gi|283440569|gb|ADB19011.1| glycyl-tRNA synthetase [Pirellula staleyi DSM 6068]
          Length = 537

 Score = 68.3 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 55/334 (16%), Positives = 107/334 (32%), Gaps = 42/334 (12%)

Query: 336 LKPMNCPGHVAVFNHGLKSYR-ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           L+P    G    F +   S R  +P  +A+ G  +RNE +   +   R R F Q +   F
Sbjct: 213 LRPETAQGIFVNFKNVCDSTRVRVPFGIAQVGKSFRNEITPK-NFTFRSREFEQMEIEFF 271

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDT 454
           C             +  +  Y D G     ++L     + +   + +      ++     
Sbjct: 272 CHPSTSREWYQYWRDRRMKWYTDMGLSTERLQLREHHVEEL---SHYSCGTADIEYAFPF 328

Query: 455 IKNSSQDRINTGVLLGEGAFY---------GPKFEYILKDAIGRDWQCGTIQVDFNLPSR 505
           +       +    +   G F           P  +  LK  +G D +        +L  R
Sbjct: 329 LPAGEYGEL--EGIAHRGDFDLRSHMEGKLDPNSKPDLKVELGPDGKPKHRGSGKDLTYR 386

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK----------------GNLPLW 549
            +       +E+  P +I     G+    +  + E +                   L   
Sbjct: 387 DDLT-----NERFTPHVIE-PSAGADRATLAFLCEAYHEDQAPDENGVMQTRVVMKLHPR 440

Query: 550 LSPIQAIV--TTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIII 607
           ++PI+A V          E AQEI   LK    ++  D +   +  + R       P  I
Sbjct: 441 IAPIKAAVFPLVKKDGMPEKAQEIYRALKKR-YNVFYDEKGA-VGRRYRRQDEAGTPFCI 498

Query: 608 ICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
               +   + ++ IR   +   +++S    +  +
Sbjct: 499 TVDGQSLIDNTVTIRDRDTLEQKRISADAVLAEI 532


>gi|294085497|ref|YP_003552257.1| Histidyl-tRNA synthetase, class IIa [Candidatus Puniceispirillum
           marinum IMCC1322]
 gi|292665072|gb|ADE40173.1| Histidyl-tRNA synthetase, class IIa [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 422

 Score = 68.3 bits (165), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 57/388 (14%), Positives = 119/388 (30%), Gaps = 43/388 (11%)

Query: 288 KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
           +  ++E+ TP      ++ +        +++   +      +      L+P N  G V  
Sbjct: 34  QYGFQEMATPIFEFTDVFSKP---LGTSSDVVTKETYSFEDRGGEQITLRPENTAGVVRA 90

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD------DAHVFCTKEQMF 401
              G  + + LP++    G ++R E         R+R F Q               E + 
Sbjct: 91  MISGGLT-QSLPLKFFYAGPMFRYERPQK----GRMRQFHQIGIEYLGPTDALADAEIIA 145

Query: 402 NEC-----LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG--SDALWDDAENIMK----G 450
                   + + +  +      G  +  +         +G   DAL DD++  +      
Sbjct: 146 CGARVLADIGVLDKCVLHLNSLGDTESRLTYRAALVDYLGGHKDALSDDSKQRLAVNPLR 205

Query: 451 VLDTIKNSSQDRINTGVLLGEG--------------AFYGPKFEYILKDAI--GRDWQCG 494
           +LD+     ++ I     L +               A    K  +     +  G D+ C 
Sbjct: 206 ILDSKDKGDREIIVAAPRLQDHLNDLSKAHFETLTTALDAAKIAWQFDPLLVRGLDYYCH 265

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQ 554
           T               +          M+       +    GI            + P Q
Sbjct: 266 TAFEFITDALGAQGTVLGGGRYDGLSEMLGGPAIAGVGWAGGIERLAMLAAGGTVVVP-Q 324

Query: 555 AIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
             V +  S +  +A ++A  L+    S++       +  K+++     I I II G  E 
Sbjct: 325 LAVVSADSESDHHAFQLAESLRDAGFSVDLPTAGN-MGKKMKKLDKAGIKIAIILGGDEV 383

Query: 615 SERSIGIRRFGSTTTQKVSLLDAIPILT 642
               + +R     +  +V+    +  L+
Sbjct: 384 ERGVVQLRNLADGSQDEVTRDALVKALS 411


>gi|259501267|ref|ZP_05744169.1| serine-tRNA ligase [Lactobacillus iners DSM 13335]
 gi|302191075|ref|ZP_07267329.1| seryl-tRNA synthetase [Lactobacillus iners AB-1]
 gi|309803335|ref|ZP_07697430.1| serine--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
 gi|309807340|ref|ZP_07701309.1| serine--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
 gi|309809016|ref|ZP_07702890.1| serine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
 gi|312871091|ref|ZP_07731193.1| serine--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
 gi|312872053|ref|ZP_07732128.1| serine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
 gi|312873500|ref|ZP_07733550.1| serine--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
 gi|312875339|ref|ZP_07735347.1| serine--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
 gi|315653217|ref|ZP_07906140.1| serine--tRNA ligase [Lactobacillus iners ATCC 55195]
 gi|325911293|ref|ZP_08173706.1| serine--tRNA ligase [Lactobacillus iners UPII 143-D]
 gi|325913547|ref|ZP_08175912.1| serine--tRNA ligase [Lactobacillus iners UPII 60-B]
 gi|329920825|ref|ZP_08277412.1| serine--tRNA ligase [Lactobacillus iners SPIN 1401G]
 gi|259167394|gb|EEW51889.1| serine-tRNA ligase [Lactobacillus iners DSM 13335]
 gi|308164499|gb|EFO66751.1| serine--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
 gi|308166322|gb|EFO68532.1| serine--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
 gi|308170672|gb|EFO72691.1| serine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
 gi|311089173|gb|EFQ47609.1| serine--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
 gi|311091009|gb|EFQ49403.1| serine--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
 gi|311092346|gb|EFQ50715.1| serine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
 gi|311093419|gb|EFQ51761.1| serine--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
 gi|315489380|gb|EFU79019.1| serine--tRNA ligase [Lactobacillus iners ATCC 55195]
 gi|325476853|gb|EGC80006.1| serine--tRNA ligase [Lactobacillus iners UPII 143-D]
 gi|325477126|gb|EGC80273.1| serine--tRNA ligase [Lactobacillus iners UPII 60-B]
 gi|328935605|gb|EGG32072.1| serine--tRNA ligase [Lactobacillus iners SPIN 1401G]
          Length = 436

 Score = 67.9 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 74/188 (39%), Gaps = 9/188 (4%)

Query: 272 GWKIFQTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G  + + + ++ +   +K  Y E+  P +++    Q +G +  +  +++ +   DD  K 
Sbjct: 170 GALLERAVFNFFLDENVKAGYTEVIPPYLVNYDSMQGTGQFPKFTEDVYTIVDNDDPDKP 229

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFT 387
            R   L P      V  F   +   ++LP+ +      +R+E   +     GL+R+  F 
Sbjct: 230 -RELTLIPTAEVPLVNYFRDKILDIKQLPINVTAMSPAFRSEAGSAGRDTRGLIRMHEFR 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +    C ++  + E  K+      + +       +V LST              +W  
Sbjct: 289 KVEMVKICDEDSSWQELDKLTKNAEHLLQKLELPYHVVALSTGDASFTSAKTYDLEVWMP 348

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 349 AQNQYREI 356


>gi|302389387|ref|YP_003825208.1| glycyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
 gi|302200015|gb|ADL07585.1| glycyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
          Length = 460

 Score = 67.9 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 53/344 (15%), Positives = 101/344 (29%), Gaps = 51/344 (14%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR-ELPVRLAEFGSVYRNEPS 374
            N+                 L+P    G    F + L + R +LP  +A+ G  +RNE +
Sbjct: 148 FNLMFKTHQGVVEDSSSVVYLRPETAQGIFVNFKNVLDTSRVKLPFGIAQIGKAFRNEIT 207

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
              + + R R F Q +   F     +  + E  +   +   +      E + ++  +  E
Sbjct: 208 PG-NFIFRTREFEQMELEFFVKPGEDMEWFEYWRQFTMDFFLSLGVKKENLRLRDHSPEE 266

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
               S A  D                    +      G G  +G         +   ++ 
Sbjct: 267 LSHYSKATTD--------------------LEYNFPFGWGELWGVANRTDYDLSKHIEYS 306

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI-----ENFKGNLP 547
             ++        R    YV                 G     + I+      E  +G   
Sbjct: 307 GKSLTYFDQEEKRHIVPYVIE------------PSLGVDRAMLAILCDAYREEEVEGETR 354

Query: 548 LWL------SPIQAIVTTITSSA--VEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           + L      +PI+  V  +       E A++I + LK     +E D    +I  + R   
Sbjct: 355 VVLGFHPDVAPIKCAVFPLFKKEPLEELARKIYHDLKKC-YVVEYDNTG-SIGKRYRRQD 412

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
               P  I        +  + IR   +    ++ + +    L  
Sbjct: 413 EIGTPYAITVDFDSLDDHKVTIRNRDTMQQDRIGIDNIKDYLRD 456


>gi|194336041|ref|YP_002017835.1| seryl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1]
 gi|238693405|sp|B4SF71|SYS_PELPB RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|194308518|gb|ACF43218.1| seryl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1]
          Length = 431

 Score = 67.9 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 33/221 (14%), Positives = 73/221 (33%), Gaps = 21/221 (9%)

Query: 244 RDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEINTP 297
           ++H +L + + +          G+G   +  KG ++ + LI++M     +   Y E+  P
Sbjct: 142 KNHLELGKSLRILDFERGAKVCGAGFPVYIGKGARLERALINFMLDCHTERHGYTEVFPP 201

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
             ++Q   + +G W  +   ++ ++  D            P        +    +   + 
Sbjct: 202 FFVNQESLRGTGQWPKFADQVYHMEEDD--------LYAIPTAEVPITNLHRGEMLDTKT 253

Query: 358 LPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           LP+  A + + +R E         G +RV  F + +   F   E+ +     I     +I
Sbjct: 254 LPISYAAYSACFRREAGSYGKDTRGFLRVHQFNKVEMVKFTRPEESYEALETIRENAEAI 313

Query: 415 YKDFGFEKI----MVKLSTRPEKRVGSDALWDDAENIMKGV 451
                             +    +     +W  AE      
Sbjct: 314 LTALKIPYRVLLLCSGDISANATKCYDIEVWSPAEQKYLEA 354


>gi|254169125|ref|ZP_04875962.1| histidyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|197621964|gb|EDY34542.1| histidyl-tRNA synthetase [Aciduliprofundum boonei T469]
          Length = 405

 Score = 67.9 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 61/417 (14%), Positives = 122/417 (29%), Gaps = 69/417 (16%)

Query: 274 KIFQTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
            +F  + S  R      + E++TP V    L++               +      K  R 
Sbjct: 11  IVFDKICSVAR---SFGFHEVDTPSVELLDLFRIKS------GEEIVKQTFSFVDKGGRE 61

Query: 334 FALKPMNCPGHVAVFNHGLKSYREL--PVRLAEFGSVYRNE--PSGSLHGLMRVRGFTQD 389
                   P      +  + + ++L  PV+   F  ++R E   SG      R+R F Q 
Sbjct: 62  I----TLIPELTPSVSRMIAARKDLVKPVKWFSFPKMWRYEEPQSG------RLREFYQF 111

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFG-----FEKIMVKLSTRPEKRVGSDALWDDA 444
           +A +F       +   ++  L + I    G       K   ++      R       ++A
Sbjct: 112 NADIFGVANITADA--EVMALAMEILDSLGLKGKYVMKFSDRILMEELLRSLDIEKIEEA 169

Query: 445 ------------ENIMKGVLDTIKNSSQDRINT---------GVLLGEGAF--------- 474
                       E   + +L   +  + D + +          VL     F         
Sbjct: 170 FRIIDKKDKIPEERFYEEMLKITREENVDSLISLLKLSGNVDTVLSKFEHFERSEILASL 229

Query: 475 ------YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
                 YG      L    G  +  G +    +    F A       ++   +   +   
Sbjct: 230 KDLLKAYGKTATLDLSIVRGLAYYTGVVFEVHDAKGEFRAVLGGGRYDRVVELFGAQPTP 289

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQAI--VTTITSSAVEYAQEIANLLKSHHLSIETDF 586
                    ++E       +W      +     I     + A EIA  L+     ++ D 
Sbjct: 290 AVGFGMGDAVLELLMRREGVWPDERIEVDYFIAIIPGFRKEAIEIAMELRRSGYVVDIDL 349

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              +I  +++          II G+ E     + ++   S   + V + +   ++ K
Sbjct: 350 SERSIGKQLKYAHRINAKYTIIVGE-EIKNGEVALKDMESGEQRNVKIEELKEVIEK 405


>gi|295402717|ref|ZP_06812659.1| seryl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93]
 gi|312109164|ref|YP_003987480.1| seryl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
 gi|294975248|gb|EFG50884.1| seryl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93]
 gi|311214265|gb|ADP72869.1| seryl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
          Length = 424

 Score = 67.9 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 42/244 (17%), Positives = 90/244 (36%), Gaps = 22/244 (9%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIF 276
           G +     E+ ++      S E + H  +A ++ +          GS  +F+   G ++ 
Sbjct: 115 GKSEEDNVEVRKWGEPRSFSFEPKPHWDIADQLGILDFERAAKVTGSRFVFYKGLGARLE 174

Query: 277 QTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           + LI++M     +   Y+EI  P ++++     +G    +  + F +        +   +
Sbjct: 175 RALINFMLDVHIEEFGYQEILPPYLVNRASMTGTGQLPKFEEDAFRI--------ETEDY 226

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDA 391
            L P        +    + S  +LP+  A + + +R E   +     GL+R   F + + 
Sbjct: 227 FLIPTAEVPVTNLHRDEILSAEDLPIYYAAYSACFRAEAGAAGRDTRGLIRQHQFNKVEL 286

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENI 447
             F   E  ++E  K+ N    I +  G    +V L T              +W  +   
Sbjct: 287 VKFVKPEDSYDELEKLTNQAERILQLLGLPYRVVCLCTGDLGFAAAKTYDIEVWLPSYGT 346

Query: 448 MKGV 451
            + +
Sbjct: 347 YREI 350


>gi|288925843|ref|ZP_06419774.1| serine--tRNA ligase [Prevotella buccae D17]
 gi|288337498|gb|EFC75853.1| serine--tRNA ligase [Prevotella buccae D17]
          Length = 429

 Score = 67.9 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 48/351 (13%), Positives = 103/351 (29%), Gaps = 34/351 (9%)

Query: 110 KEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYK------VEILE 163
            E+         IEK +     R     K  L+ ++A  L +      K       E ++
Sbjct: 18  LEKKHFDGAREAIEKVLAIDTRRRDAQQKFDLNKQEANRLSKQIGALMKSGKNEEAEAVK 77

Query: 164 SIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
              A+   T     E  +      V     +          G     D+   ++ +  G 
Sbjct: 78  MKVAELKTTSNELKEEQEKAEKELVEQLCAIPNIPHEDVPEG----KDACDNVVVKEGGE 133

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYM 283
                 +   +   L++    D     +           +G   +  K  +  + L ++ 
Sbjct: 134 KPELPADALCHWDLLKKYNLVDFDLGVKITG--------AGFPVYLGKMARFQRALEAFF 185

Query: 284 RRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
             + +   Y E+  P V++            Y       K       +L    L P    
Sbjct: 186 LEEARKAGYLEVQPPFVVN--------QASGYGTGQLPDKEGQMYHANLDDLYLIPTAEV 237

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQ 399
               +F   +   +ELP++   + + +R E       + GL R+  F + +     T E 
Sbjct: 238 PVTNIFRDEILDEKELPIKRCAYSACFRREAGSYGKDVRGLNRLHQFDKVEIVRIDTPEH 297

Query: 400 MFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAEN 446
            ++   ++ N +  + +       +++L                 W  A+ 
Sbjct: 298 SYDSLNEMLNHVEGLLQKLELPYHILRLCGGDMSFTSAICYDFETWSAAQQ 348


>gi|289193081|ref|YP_003459022.1| histidyl-tRNA synthetase [Methanocaldococcus sp. FS406-22]
 gi|288939531|gb|ADC70286.1| histidyl-tRNA synthetase [Methanocaldococcus sp. FS406-22]
          Length = 413

 Score = 67.9 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 63/428 (14%), Positives = 134/428 (31%), Gaps = 80/428 (18%)

Query: 268 WHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADD 326
           +  +  K  + + + +R   +   Y+EI TP       ++               +    
Sbjct: 11  FLPEEMKKRRFIENKLREVFERYGYKEILTP------TFETFELIAKKTGEEIRKQLYVF 64

Query: 327 TIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
                R  AL+P      V  + + LK+ ++ P+RL  F + +R E   +     R R F
Sbjct: 65  KDHGGREMALRPEMTSPVVRFYLNELKNLQK-PLRLYYFANCFRYERPQA----GRFREF 119

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV-----------------KLST 429
            Q    +   KE + +   ++ NL +    + G +  +                  +   
Sbjct: 120 WQMGCELIGCKEPLADA--EVLNLAMDGLINIGLDFDVHIGHLGVLKGVLEEFNVSEEEE 177

Query: 430 RPEKRVGSDALWDDAENIMKGVL---------DTIKNSSQDRINTGVLLGEGAFYGPK-- 478
              +R+     +++ E  +  +L         D +K      I   +      F  PK  
Sbjct: 178 VKIRRLIDKEDYENLEVYLNEILGEEKKELIFDILKFKGGREILDELKEILKDF--PKSI 235

Query: 479 ---------FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRA--- 526
                     E+++ D   +      I    +  +            K            
Sbjct: 236 EAIKNLEKILEFVIHD---KYTINLGIARGLDYYTGMVFEIYGKKGAKQICGGGRYDNLI 292

Query: 527 -VFGSIERF---IGIMIENFKGNLP-LWLSPIQAIVTTITSSAVEYAQE--IANLLKSHH 579
             FG             +    N+  L +     ++  +        +   IA+ L+   
Sbjct: 293 ETFGGEPTPAVGFAYGFDRIMMNIDDLDIEEEGILIIPVKKDKELIKKSLIIADKLRKAG 352

Query: 580 LSIETDFRNETINYKIREH-------SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
             +E     E +  K+R+          KK+   II G+KE +E  + ++   +   + +
Sbjct: 353 KIVEL----EIMGRKLRKALDYANSRGFKKV---IIVGEKELNEGKVTLKDMITGEQKLI 405

Query: 633 SLLDAIPI 640
           S+ + + I
Sbjct: 406 SIDELVNI 413


>gi|328467647|gb|EGF38702.1| histidyl-tRNA synthetase [Lactobacillus helveticus MTCC 5463]
          Length = 428

 Score = 67.9 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 71/424 (16%), Positives = 133/424 (31%), Gaps = 73/424 (17%)

Query: 276 FQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           +Q +    R      +Y EI TP       ++         + +   +  D   K  R  
Sbjct: 20  WQKVEETARNFFNRANYREIRTP---SFENYEIFSRSSGDSSEIVEKQMYDFNDKGGRHI 76

Query: 335 ALKPMNCPGHVAVF--NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
           AL+P    G V  +  +         P  +    S +R E   +     R R F Q    
Sbjct: 77  ALRPEGTAGVVRAYVEDKMYAPEVVKPFNVFYMESTFRYERPQA----GRQREFHQIGVE 132

Query: 393 VFCT---------------------------------KEQMFNECLKIHNLIISIYKDFG 419
            F +                                  EQ+            +  KD  
Sbjct: 133 SFGSSNPLADVQTIMMGHDLLGELGVKNYQLHINTLGDEQVRKGYHDALVNYFTPVKDKL 192

Query: 420 FEKIMVKLSTRPEKRVGS----------------DALWDDAENIMKGVLDTIKNSSQDR- 462
            E    +L   P + + S                D L D+++   + +L  +     D  
Sbjct: 193 SEDSQRRLRDNPLRILDSKDDRDKKFLPDAPKIRDFLDDNSKANFESILKMLDQLGIDYV 252

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
           I+  ++ G   + G  FE++++D    +     +        R++      +  +   V 
Sbjct: 253 IDDDLVRGLDYYTGVIFEFMVEDKSLWESATTILGGG-----RYDHLVEEFNGPETPAV- 306

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSI 582
                FG  E  + +++E     L      I   +T I     + A EIA  L+      
Sbjct: 307 ----GFGIGEERLMLVLEKQNPEL-FKNEGIDFFITNIGEGTAQKAIEIARSLRKQGFEA 361

Query: 583 ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA--IPI 640
           + D   + +  + ++   +    +I  G+KE +   + I+R     T  +SL D   +  
Sbjct: 362 DFDVNQKKLKGQFKKADREGAKYVITLGEKELANGVLNIKRLADGKTIDLSLEDINDMNK 421

Query: 641 LTKE 644
           + KE
Sbjct: 422 VMKE 425


>gi|332296462|ref|YP_004438385.1| Seryl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
 gi|332179565|gb|AEE15254.1| Seryl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
          Length = 426

 Score = 67.9 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 47/240 (19%), Positives = 87/240 (36%), Gaps = 19/240 (7%)

Query: 213 NRPMLSRI-YGTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE---DGSGVIF 267
              +L  + +GT       +  +    E   E   H  L + + L  I            
Sbjct: 106 PNILLPDVPFGTDETQNVVVNYFGKPKEFDFEILPHWDLGKTLGLLDIERAGKVTGSRFS 165

Query: 268 WHR-KGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD 325
           +H   G ++ + L+++M      D + E+  P ++++     +G    +R  +   KCAD
Sbjct: 166 FHVGLGARLVRALLNFMMDMHRSDGFVELWPPYLVNEASMYGTGQLPKFRDEL--FKCAD 223

Query: 326 DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMR 382
           D       + L P         F   + S   LP+R   + + +R E       + G++R
Sbjct: 224 D------PYFLIPTAEVPVTNFFRDEILSDDSLPIRFCAYSACFRREAGSYGKDVRGIIR 277

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWD 442
              F + +  VFC  E   NE   I      + K       +++L +      GS   +D
Sbjct: 278 QHQFDKVELVVFCRPEDSMNELSIITEQAQKVLKQLKLPYRVIELCSGDLGF-GSAKTYD 336


>gi|196250095|ref|ZP_03148789.1| histidyl-tRNA synthetase [Geobacillus sp. G11MC16]
 gi|196210279|gb|EDY05044.1| histidyl-tRNA synthetase [Geobacillus sp. G11MC16]
          Length = 426

 Score = 67.9 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 70/421 (16%), Positives = 126/421 (29%), Gaps = 55/421 (13%)

Query: 269 HRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
                + +Q +    R   +   YEEI TP        +          ++   +     
Sbjct: 13  LPGETEKWQYVEQVARDLCRRYGYEEIRTPIF---EHTELFLRGVGDTTDIVQKEMYTFE 69

Query: 328 IKDLRTFALKPM-NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
            K  R   L+P    P   A   H L      PV+L   G ++R E   +     R R F
Sbjct: 70  DKGGRALTLRPEGTAPVVRAFVEHKLYGSPNQPVKLYYAGPMFRYERPEA----GRFRQF 125

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM-----------VKLSTRPEKRV 435
            Q       + +   +   ++  L + IYK  G ++I             +       R 
Sbjct: 126 VQFGVEAIGSSDPAIDA--EVMALAMHIYKALGLKRIRLVINSLGDVDSRRAHREALVRH 183

Query: 436 GSDALWD-------DAENIMKGVLD-------TIKNSSQDRINTGVLLGEGAF-----YG 476
            SD + +         E     +LD        +  S+   ++         F     Y 
Sbjct: 184 FSDRIHELCPDCQVRLETNPLRILDCKKDRDHELMASAPSILDYLNDESRAYFEKVKQYL 243

Query: 477 PKFEYIL----KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS--------EKCHPVMIH 524
              +       +   G D+   T     +    F A               E   P    
Sbjct: 244 TMLDIPFVIDSRLVRGLDYYNHTTFEIMSEAEGFGAAATLCGGGRYNGLVQEIGGPETPG 303

Query: 525 RAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIET 584
                SIER +  + E     LP+    I   V  +   A +    +   L+   L +E 
Sbjct: 304 IGFALSIERLLAAL-EAEGIELPIHRG-IDCYVVAVGERAKDETVRLVYELRRAGLRVEQ 361

Query: 585 DFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           D+    +  +++         + I GD+E  +++  ++   S     V L +    L + 
Sbjct: 362 DYLGRKMKAQLKAADRLGASFVAIIGDEELEKQTAAVKHMASGEQTDVPLGELASFLIER 421

Query: 645 S 645
           +
Sbjct: 422 T 422


>gi|315574025|gb|EFU86216.1| seryl-tRNA synthetase [Enterococcus faecalis TX0309B]
 gi|315581976|gb|EFU94167.1| seryl-tRNA synthetase [Enterococcus faecalis TX0309A]
          Length = 423

 Score = 67.9 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 37/223 (16%), Positives = 86/223 (38%), Gaps = 21/223 (9%)

Query: 242 EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEIN 295
           E + H ++   + +          GS  +++   G ++ + + ++M  +  +   Y E+ 
Sbjct: 136 EPKPHWEIGEALGILDFERGAKVSGSRFLYYKGLGARLERAVYNFMLDQHVNEHGYTEVI 195

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
            P +++      +G +  ++ ++F V  +D T+         P         +N+ +   
Sbjct: 196 PPYLVNSKAIFGTGQFPKFKEDVFQVAESDLTLI--------PTAEVPLTNYYNNEILDA 247

Query: 356 RELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
           +ELP+        +R+E   +     GL+R+  F + +   F   E  + E  K+ N   
Sbjct: 248 QELPIYFTALSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFSDAEHSYEELEKMTNNAG 307

Query: 413 SIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
            I +  G    ++ LST              +W  A+   + +
Sbjct: 308 DILEKLGLPYRVITLSTGDMGFSAAKTYDLEVWIPAQKTYREI 350


>gi|308272097|emb|CBX28705.1| Seryl-tRNA synthetase [uncultured Desulfobacterium sp.]
          Length = 431

 Score = 67.9 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 34/223 (15%), Positives = 81/223 (36%), Gaps = 21/223 (9%)

Query: 242 EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRRKI--KDDYEEIN 295
           E ++H +L   + +F         G+    +   G K+ +++I++M      +  Y E+ 
Sbjct: 142 EPKNHWELGESLKIFDFERASKITGARFPLYFGAGAKLERSIINFMLEIHTTEHGYTEVL 201

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
            P +++      +G    ++ ++F +        +   + + P        +  + +   
Sbjct: 202 PPFIVNSQSLTSTGQLPKFKDDLFKL--------EGWDYYMVPTAEVPVTNIHQNEILDE 253

Query: 356 RELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
            +LP+    +   +R+E         GL+R   F + +   F   E  ++E  K+     
Sbjct: 254 SDLPILYTAYTPCFRSEAGSYGKDTKGLIRQHQFNKVELVKFVKPETSYDELEKLTQDAE 313

Query: 413 SIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
           SI K       +V L                +W  A+ + + +
Sbjct: 314 SILKRLNLPYRVVSLCAGDLGFSSAQTYDIEVWMPAQGVYREI 356


>gi|293392770|ref|ZP_06637088.1| alanine-tRNA ligase [Serratia odorifera DSM 4582]
 gi|291424629|gb|EFE97840.1| alanine-tRNA ligase [Serratia odorifera DSM 4582]
          Length = 875

 Score = 67.9 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 26/150 (17%), Positives = 63/150 (42%), Gaps = 10/150 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGF-YYDFDKEQPFS 115
            S++ +  +  R+   + HS  H++  A++ +  E     G ++ D +  +DF   +   
Sbjct: 546 DSVDALIDQVRRNRIRLNHSATHLLHAALRQVLGEHVAQKGSLVNDKYLRFDFSHFEAMK 605

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            +++  +E  + + + R+ P   + ++ + A+E         K          ++V +  
Sbjct: 606 PEQIRAVEDLVNQQVRRNLPVQTEVMALDDAKEKGAMALFGEKY--------DDHVRVLT 657

Query: 176 QGEW-FDLCRGPHVRSTGQVKKFFKLMKVA 204
            G++  +LC G H   TG +  F    +  
Sbjct: 658 MGDFSTELCGGTHASRTGDIGLFRIQSESG 687


>gi|196018718|ref|XP_002118857.1| hypothetical protein TRIADDRAFT_62857 [Trichoplax adhaerens]
 gi|190577957|gb|EDV18657.1| hypothetical protein TRIADDRAFT_62857 [Trichoplax adhaerens]
          Length = 510

 Score = 67.9 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 34/151 (22%), Positives = 63/151 (41%), Gaps = 9/151 (5%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFS 115
             ++ +   + R+L    HS  HI+  A++ I  +     G ++  D   +DF   +  +
Sbjct: 252 DEVKFLVDYNLRNLIKANHSATHILHFALREILGKHVTQKGSLVSYDKLRFDFAHNKAMT 311

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            DE+  +EK++  II  +S      +S + A++         K          E V +  
Sbjct: 312 KDEIINVEKRVNSIIMLNSSISTNLMSIDAAKKSGAMALFGEKY--------DEEVRVVS 363

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLMKVAGA 206
            GE  +LC G  V++TG +K   K  +    
Sbjct: 364 MGESIELCGGTRVKNTGDIKDLAKSNEKYKN 394


>gi|153006742|ref|YP_001381067.1| alanyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
 gi|205829977|sp|A7HH87|SYA_ANADF RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|152030315|gb|ABS28083.1| alanyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
          Length = 904

 Score = 67.9 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 44/178 (24%), Positives = 69/178 (38%), Gaps = 27/178 (15%)

Query: 37  KAVAVAINGKVCDLSDPV----------REGS------IEIITPEDPRSLAVIRHSCAHI 80
            A    +  +V D   PV           EG       +E+   +  R L    HS  H+
Sbjct: 542 AAPGGRV--RVEDTRRPVPGLVTHVGVVEEGELAVGDLVELAVDDRRRDLIRANHSATHL 599

Query: 81  MAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQ 139
           +  A++    +     G I+  D   +DF   QP S +EL  IE+++ E++  ++     
Sbjct: 600 LQLALRETLGDHVKQAGSIVAPDYLRFDFSHFQPLSEEELNAIERRVNELVRENAETETA 659

Query: 140 YLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
            L  E AR+         K          + V + R G   +LC G HVR TG +  F
Sbjct: 660 VLKLEDARQSGAMMIFGEKY--------GDVVRVVRLGPSKELCGGTHVRRTGDIAFF 709


>gi|81429415|ref|YP_396416.1| seryl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
 gi|123563655|sp|Q38UM4|SYS_LACSS RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|78611058|emb|CAI56111.1| Seryl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
          Length = 424

 Score = 67.9 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 73/188 (38%), Gaps = 14/188 (7%)

Query: 272 GWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G ++ + + ++M  +  K+ YEE+ TP +++      +G +  +  +++ +        +
Sbjct: 170 GARLERAVYNFMLDQHAKEGYEEMITPYLVNGESMFGTGQFPKFTEDVYTMT------NE 223

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFT 387
                L P         +   +    +LP+        +R+E   +     GL+R+  F 
Sbjct: 224 GEPMTLIPTAEVPLTNFYRDEILDGAQLPIYFTALSPAFRSEAGSAGRDTRGLIRMHQFN 283

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +   F   E+ FNE  K+     +I K       ++ L+T              +W  
Sbjct: 284 KVEMVKFTKPEESFNELEKMTADAENILKALNLPYHVITLATGDASFTSAKTYDIEVWLP 343

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 344 AQNTYREI 351


>gi|228923155|ref|ZP_04086446.1| Histidyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228836534|gb|EEM81884.1| Histidyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 476

 Score = 67.9 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 75/465 (16%), Positives = 151/465 (32%), Gaps = 64/465 (13%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWK--------IFQTLISY 282
              Y   +   +  +       + L    E+   +     +G +        ++Q +   
Sbjct: 21  HHGYNTLVPTVQTVEAGVFLFLLRLKQFEEEL-NMSIQIPRGTQDILPGTVELWQYIEGQ 79

Query: 283 MRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPM-N 340
            R   +  +Y+EI TP        +          ++   +      +  R+  L+P   
Sbjct: 80  AREICRRYNYKEIRTPIF---EHTELFLRGVGDTTDIVQKEMYSFQDRGERSLTLRPEGT 136

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
            P   +   + +      P +L   G ++R E   +     R R F Q       + +  
Sbjct: 137 APVVRSYVENKMFGDATQPTKLYYIGQMFRYERPQA----GRYRQFVQFGIEAIGSNDPA 192

Query: 401 FNECLKIHNLIISIYKDFGFEKI---MVKLSTRPEKRVGSDALWDDAENIMKG------- 450
            +   ++  L +  Y+  G + I   +  L     ++   DAL    E  +         
Sbjct: 193 IDA--EVIALAVEFYRGMGLKNIKVVLNSLGDTASRQAHRDALIAHFEPRIGEFCSDCQS 250

Query: 451 --------VLDTIKNSSQDRINT-----GVLLGEGAFYGPK-----------FEYILKDA 486
                   +LD  K+ + + + T       L  + A Y  K           FE      
Sbjct: 251 RLEKNPLRILDCKKDRNHELMGTAPSITEYLNEDSAVYYDKVQELLTMMDVPFEKDPNLV 310

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHS--------EKCHPVMIHRAVFGSIERFIGIM 538
            G D+   T+    +    F A    S          E   P M       SIER I  +
Sbjct: 311 RGLDYYQHTVFEIMSEAEGFGAITTLSGGGRYNGLVQEIGGPEMPGIGFAMSIERLIMAL 370

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
            +     LP+    I   V  +   A ++A ++A  L+   LS+E D+ +  +  + +  
Sbjct: 371 -KAENIELPIE-HSIDCYVVALGEKAKDHAAKVAFDLRKAGLSVEKDYLDRKMKAQFKSA 428

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              K   + + G+ E  +  I ++   +   ++V+L      + +
Sbjct: 429 DRLKAKFVAVLGEDELDKGIINLKDMATGEQEEVALDVFASYVAE 473


>gi|167628656|ref|YP_001679155.1| alanyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
 gi|205830065|sp|B0TFY7|SYA_HELMI RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|167591396|gb|ABZ83144.1| alanyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
          Length = 883

 Score = 67.9 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 37/153 (24%), Positives = 64/153 (41%), Gaps = 11/153 (7%)

Query: 55  REGSIEIITPEDPRSLAVIRH-SCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQ 112
           +EG   +   E  R LA+ RH S  H+M +A++ +  E     G  +  D   +DF    
Sbjct: 549 KEGDQVVAEVESARRLAIARHHSATHLMHKALKEVLGEHVNQAGSLVTPDRLRFDFSHFS 608

Query: 113 PFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVT 172
           P + DE  +IE  +   + +  P      S ++A+ +  +     K          + V 
Sbjct: 609 PLTRDEWNRIEAAVNRAVFQALPVEVFETSIDEAKAMGATALFGEKY--------GDRVR 660

Query: 173 LYRQGEW-FDLCRGPHVRSTGQVKKFFKLMKVA 204
           + R G +  +LC G H+ +T QV     L +  
Sbjct: 661 VVRMGNYSMELCGGTHLDNTSQVGLCKLLSESG 693


>gi|225181104|ref|ZP_03734551.1| histidyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
 gi|225168301|gb|EEG77105.1| histidyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
          Length = 416

 Score = 67.9 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 60/419 (14%), Positives = 129/419 (30%), Gaps = 62/419 (14%)

Query: 269 HRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQS--GHWDSYRANMFAVKCAD 325
                K ++ L            YEEI TP      L+ +      D     M+  K   
Sbjct: 11  LPDEIKTWRQLEHKAVEICHRFGYEEIRTPIFEHTELFLRGVGDVTDIVSKEMYTFKDRS 70

Query: 326 DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRG 385
           +    LR     P+      +      +     PV+L   G ++R +  G+     R R 
Sbjct: 71  ERSLTLRPEGTAPVARAYMESNLKGIPQ-----PVKLFYIGPMFRYDRPGA----GRYRQ 121

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF------------EKIMVKLSTRPEK 433
           F Q    VF T     +   ++  L +  ++  G                  +  +  + 
Sbjct: 122 FYQFGVEVFGTNAPAIDA--EVIVLALDFFRSLGLSDFALHLNSVGCPDCRQEYRSALQN 179

Query: 434 RVGSDALW---DDAENIMKGVL-------DTIKNSSQDR---INTGVLLGEGAFYGPKFE 480
            +         D +E   K  +       D  K ++++    ++         F   K  
Sbjct: 180 ELKDIVSTLCSDCSERFDKNPMRILDCKIDKCKEATKNLPSILDYLCSDCSAHFEQVKL- 238

Query: 481 YILKDAIGRDWQCGTI---QVDFNLPSRFNAFYVNSHSEK---------------CHPVM 522
             L + +G ++         +D+   + F        +E+                 P  
Sbjct: 239 --LLNKLGEEYVINPRLVRGLDYYTKTAFEIISTVGDTEQAIGGGGRYDNLVSTIGGPDT 296

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSI 582
                   IER +  + E+     P+    +   V    +        I   L++   S+
Sbjct: 297 PGIGFAVGIERVLLAIKESDA--YPIKGPTLDVFVAKAGNVPDYEVMPIIMDLRNAGFSV 354

Query: 583 ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           + D+  +++  + +  + K    +++ G++E   + + +R   + + + V L      L
Sbjct: 355 DMDYMGKSLKAQFKTANKKDARYVVVLGEEEMQSKEVTLRNMTTGSQETVGLKQLAERL 413


>gi|242310618|ref|ZP_04809773.1| seryl-tRNA synthetase synthetase [Helicobacter pullorum MIT
           98-5489]
 gi|239523016|gb|EEQ62882.1| seryl-tRNA synthetase synthetase [Helicobacter pullorum MIT
           98-5489]
          Length = 431

 Score = 67.9 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 40/252 (15%), Positives = 89/252 (35%), Gaps = 20/252 (7%)

Query: 220 IYGTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWK 274
            +G   N   E+ + L     S   ++H +LA +              S    +   G K
Sbjct: 113 PFGKDENDNVEIKKILEPKTFSFSPKEHWELAEKNGWIDFERGVKLAKSRFSVFMGMGAK 172

Query: 275 IFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTI----- 328
           + + LI+YM     +  + E+ TP +++  +   +G    +  ++F +   DD       
Sbjct: 173 LERALINYMLDFNTQRGFSEVGTPVIVNSQMLFGTGQLPKFENDLFKISDFDDEESQDSK 232

Query: 329 --KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRV 383
             K      L P        + N+ +    ELP+ +  +   +R E   +     G++R 
Sbjct: 233 EAKRGHELYLIPTAEVTLTNLHNNEILQEEELPLMMTAYTPCFRKEAGSAGRDTRGIIRQ 292

Query: 384 RGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD----A 439
             F + +     T ++      ++     ++    G    +++L         S+     
Sbjct: 293 HQFDKVELVAITTPQESEMMQERMVACASALLTSLGLPHRLIQLCGGDLGFSASNTIDIE 352

Query: 440 LWDDAENIMKGV 451
           +W   +N  + +
Sbjct: 353 VWLPGQNCYREI 364


>gi|293363634|ref|ZP_06610386.1| glycine--tRNA ligase [Mycoplasma alligatoris A21JP2]
 gi|292552790|gb|EFF41548.1| glycine--tRNA ligase [Mycoplasma alligatoris A21JP2]
          Length = 446

 Score = 67.9 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 56/365 (15%), Positives = 114/365 (31%), Gaps = 48/365 (13%)

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR-TFALKPMNCPGHVAVFN 349
            +E  T  +      +    W S +      +     I+D +    L+P    G    F 
Sbjct: 116 MQEFLTNNLKTYENSKTD--WSSIKQFNLMFETQQGVIEDSKSKVYLRPETAQGIFVNFK 173

Query: 350 HGLK-SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
           +  + +  +LP+ + + G  +RNE +   + + R R F Q +  VFC +EQ  +      
Sbjct: 174 NVSRVTRSKLPMGVGQIGKSFRNEVTPG-NFIFRTREFEQMELEVFCKEEQAQDLYKYYI 232

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
               +     G +K  +++                     K  L      + D I     
Sbjct: 233 QKAYNFATLVGIKKDSIRIREHD-----------------KEELSHYSAGTSD-IEFNFP 274

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
            G G   G                  +++                 ++K  P +I     
Sbjct: 275 FGWGELLGIANRTNFDLNAHMKATGESLEYLD-----------PETNKKIVPYVIE-PSM 322

Query: 529 GSIERFIGIMIENFK------------GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLK 576
           G     + I+ + ++                  LSP +  V  +     + A+EI N L 
Sbjct: 323 GLDRLMLAIICDAYELEELENNDSRIVLKFNKELSPYKIAVLPLVKKLEKEAREIYNFLL 382

Query: 577 SHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
             ++S   D    +I  + R          +       +++S+ +R   +    ++ + D
Sbjct: 383 DKNVSATYDETG-SIGKRYRRQDAVGTYWCLTYDYDSLNDQSVTLRNRDTMEQIRIKIKD 441

Query: 637 AIPIL 641
            +  L
Sbjct: 442 IVKYL 446


>gi|325686499|gb|EGD28527.1| histidine--tRNA ligase [Streptococcus sanguinis SK72]
          Length = 426

 Score = 67.9 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 56/423 (13%), Positives = 125/423 (29%), Gaps = 78/423 (18%)

Query: 269 HRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
             +    +Q +  + R+  +  +Y EI TP       ++          ++   +  D  
Sbjct: 13  LPQESAKWQYVEDFARKTFRKYNYGEIRTPIF---EHYEVISRSVGDTTDIVTKEMYDFY 69

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKS-----YRELPVRLAEFGSVYRNEPSGSLHGLMR 382
            K  R   L+P    G   V    +++       + PV++   GS++R E   +     R
Sbjct: 70  DKGDRHITLRP---EGTAPVVRSYVENKLFAPEVQKPVKVYYMGSMFRYERPQA----GR 122

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWD 442
           +R F Q  A  F +        +++  +    +KD G   + ++        +G+     
Sbjct: 123 LREFHQIGAECFGSSNPA--TDVEMIAMAAQFFKDIGITNVSLE-----LNSLGNPESRA 175

Query: 443 DAENIM-----------------------------KGVLDTIKNSSQDRINTGVLLGEGA 473
                +                             K   D         I   +     A
Sbjct: 176 AYRQALIDYLTPLKPSLSADSQRRLEENPLRVLDSKEAEDKAAVEGAPSILDYLDEESSA 235

Query: 474 FYGP--------------------KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS 513
           ++                        +Y          +    Q+      R++      
Sbjct: 236 YFAAVRSMLETLQIPYVINTNMVRGLDYYNHTIFEFTTEVAGSQLTICAGGRYDGLVAYF 295

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIAN 573
              +   V     +    ER + ++  + +G      + +   V  + + A   A E+  
Sbjct: 296 GGPETPGVGFGMGL----ERLLLVL--DKQGVELPIETALDVYVAVLGADANGRALELVQ 349

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            L++   + E D+ +  +  + +   I K   +I  G+ E     + ++   +     VS
Sbjct: 350 ALRTQGFAAERDYLDRKLKAQFKSADIFKAKTLITLGESEVESGQVTVKNNHNREEITVS 409

Query: 634 LLD 636
           L  
Sbjct: 410 LDQ 412


>gi|257785136|ref|YP_003180353.1| seryl-tRNA synthetase [Atopobium parvulum DSM 20469]
 gi|257473643|gb|ACV51762.1| seryl-tRNA synthetase [Atopobium parvulum DSM 20469]
          Length = 427

 Score = 67.9 bits (164), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 40/245 (16%), Positives = 83/245 (33%), Gaps = 22/245 (8%)

Query: 220 IYGTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE--DGSGVIFWH--RKGWK 274
            YG   +   E+ ++    +   E + H  L  E+ +         +G  F+     G +
Sbjct: 115 PYGKDDSDNPEVRKWGEPTQFDFEPKAHWDLGPELGMIDFDRGVKLAGTRFYLLGGMGAR 174

Query: 275 IFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           + + LI++M     +  ++E   P + +Q     +G    +  +++ V+           
Sbjct: 175 MERALINFMIDTHNQAGFKEWWPPVITNQDSLYGTGQLPKFEEDLYHVQP---------D 225

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDD 390
             L P        +    +    +LP+    F   +R E   +     G++RV  F + +
Sbjct: 226 LYLIPTAEVQLTNIHRDEILDASQLPLLYTAFTPCFREEAGSAGRDTRGIIRVHQFDKVE 285

Query: 391 AHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAEN 446
              F   E   N+   +      I +  G    +V L T              +W  + N
Sbjct: 286 MVKFAKPEDSMNQLESMVQEAEKILQLLGLPYHVVTLCTGDIGFSACKCYDIEVWLPSYN 345

Query: 447 IMKGV 451
             K +
Sbjct: 346 AYKEI 350


>gi|331002247|ref|ZP_08325766.1| alanyl-tRNA synthetase 1 [Lachnospiraceae oral taxon 107 str.
           F0167]
 gi|330411341|gb|EGG90757.1| alanyl-tRNA synthetase 1 [Lachnospiraceae oral taxon 107 str.
           F0167]
          Length = 885

 Score = 67.9 bits (164), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 62/150 (41%), Gaps = 10/150 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFS 115
            ++E +   D R      HS  H++ +A++ +        G  +  D   +DF   +  +
Sbjct: 554 DTVETVVDADNRKKTAANHSATHLLHKALREVLGNHVEQAGSYVAADRLRFDFTHFKSLT 613

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            +E+A +E+ +   I +  P +   ++ E A++         K           +V +  
Sbjct: 614 KEEIANVEEIVNAEINKALPVVTDVMNVEDAKKSGAMALFGEKYR--------GDVRVVS 665

Query: 176 QGEW-FDLCRGPHVRSTGQVKKFFKLMKVA 204
            G++  +LC G HV +T  +K F  L +  
Sbjct: 666 MGDFSKELCGGTHVHNTADIKLFKVLSENG 695


>gi|229823127|ref|ZP_04449196.1| hypothetical protein GCWU000282_00424 [Catonella morbi ATCC 51271]
 gi|229787293|gb|EEP23407.1| hypothetical protein GCWU000282_00424 [Catonella morbi ATCC 51271]
          Length = 426

 Score = 67.9 bits (164), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 48/358 (13%), Positives = 111/358 (31%), Gaps = 48/358 (13%)

Query: 105 YYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYK--VEIL 162
           Y   D E+     ++   ++   ++    +   +   + +      +   +  K   E L
Sbjct: 31  YRRLDSERRELLIDVEGAKQYRNQVSGEIAQLKRNKENADDKIAEMKEIGDRIKRDDERL 90

Query: 163 ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYG 222
             I A      +R          P++ + G      +   V    W             G
Sbjct: 91  AQIEADLEAIEHRL---------PNLPAEGVPVGADEEDNVEVRRW-------------G 128

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISY 282
           T          +    E+ +  D  + A+           S  +F+   G ++ + + ++
Sbjct: 129 TPREFDFTPLNHWEIAEKLDIIDFERGAKVSG--------SRFVFYKGLGARLERAIYNF 180

Query: 283 MRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
           M       + Y+EI  P +++      +G +  +  + F V        D R   L P  
Sbjct: 181 MLDTHTQHNGYQEIIPPYMVNDQSMFGTGQYPKFVEDTFRV-------NDERGLTLIPTA 233

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTK 397
                  + + +     LP++       +R+E   +     GL+R+  F + +   +   
Sbjct: 234 EVPLTNYYANEILPLENLPIKFTALSPSFRSEAGSAGRDTRGLIRLHQFNKVEMVKYAHP 293

Query: 398 EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
           +  F E   +      I +  G    ++ L T              +W   ++  + +
Sbjct: 294 DHSFEELESMTQNAEGILQALGLPYRVITLCTGDMGFSATKTYDLEVWIPGQDTYREI 351


>gi|227495966|ref|ZP_03926277.1| glycine--tRNA ligase [Actinomyces urogenitalis DSM 15434]
 gi|226834454|gb|EEH66837.1| glycine--tRNA ligase [Actinomyces urogenitalis DSM 15434]
          Length = 469

 Score = 67.9 bits (164), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 50/329 (15%), Positives = 105/329 (31%), Gaps = 49/329 (14%)

Query: 334 FALKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
             L+P    G    F +    + ++ P  + + G  +RNE +   + + R R F Q +  
Sbjct: 166 HYLRPETAQGIFINFANVMSAARKKPPFGIGQVGKSFRNEITPG-NFIFRTREFEQMELE 224

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
            FC             +   + Y   G ++  ++L   P          +   +  K  +
Sbjct: 225 FFCEPGTDEEWHQYWIDYRKAWYTGLGIKEDNLRLYEHPA---------EKLSHYSKRTV 275

Query: 453 DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
           D            G L G            + +    D          +L      ++  
Sbjct: 276 DLEYRFGFQGSEWGELEG------------IANRTDFDLSTHAEHSGKDLS-----YFDQ 318

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIE--------NFKG--------NLPLWLSPIQAI 556
           + +E+  P +I     G     +  ++E        N KG         L   L+P++A 
Sbjct: 319 TKNERWTPYVIE-PSAGLTRSLMAFLVEAYTEDEAPNTKGGVDTRVLLKLDPRLAPVKAA 377

Query: 557 VTTIT--SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
           V  ++        A+E+A  L+    +++ D     +  + R       P  I       
Sbjct: 378 VLPLSRKEELTGPAKELAARLRRT-WNVDYDDAGA-VGRRYRRQDEIGTPFCITYDFDSP 435

Query: 615 SERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            + ++ +R   +   +++ L      L +
Sbjct: 436 QDGAVTVRERDTMAQERIPLEGVERYLAE 464


>gi|158423363|ref|YP_001524655.1| seryl-tRNA synthetase [Azorhizobium caulinodans ORS 571]
 gi|172047946|sp|A8I4J4|SYS_AZOC5 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|158330252|dbj|BAF87737.1| seryl-tRNA synthetase, class IIa [Azorhizobium caulinodans ORS 571]
          Length = 445

 Score = 67.9 bits (164), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 48/264 (18%), Positives = 86/264 (32%), Gaps = 22/264 (8%)

Query: 236 YFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKG--WKIFQTLISYMRRKIKD-- 289
                   + H +L   + L  F  A   SG  F   KG   ++ + L  +      +  
Sbjct: 136 KRNYAFTPKQHFELGEALGLMDFETASKLSGARFVVNKGPLARLERALGQFFLDMHVEQH 195

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAV-----KCADDTIKDLRTFALKPMNCPGH 344
            Y E+N P ++       +     +  + FAV     + A     D   + L P      
Sbjct: 196 GYTEVNPPLLVRDETMYGTAQLPKFFDDQFAVYAGSTQRAIGDETDAERYWLIPTAEVPL 255

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMF 401
             +    + S  ELP+R       +R E   +     G++R   FT+ +     T E   
Sbjct: 256 TNLVRDSILSEDELPLRFTANTPCFRAEAGSAGRDTRGMIRQHQFTKVEMVSITTPETSE 315

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENIMKGV--LDTI 455
            E  ++     ++ +       +V L T              +W   +N  + +      
Sbjct: 316 EEHHRMLACAEAVLQKLDLHYRVVTLCTGDMGFASRKTFDIEVWLPGQNAYREISSCSVC 375

Query: 456 KNSSQDRINTGVLLGEGAFYGPKF 479
            +    R+N      EG   GP+F
Sbjct: 376 GDFQARRMNARYRPAEGK--GPRF 397


>gi|315608186|ref|ZP_07883178.1| histidine--tRNA ligase [Prevotella buccae ATCC 33574]
 gi|315250155|gb|EFU30152.1| histidine--tRNA ligase [Prevotella buccae ATCC 33574]
          Length = 454

 Score = 67.9 bits (164), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 14/90 (15%), Positives = 35/90 (38%)

Query: 553 IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
            Q +          Y   I   ++   +  E    +  +  ++   + K IP +++ G+ 
Sbjct: 364 TQVLFINFGEQETAYCLPILKQVRDAGIRAEIYPDSAKMKKQMNYANAKGIPFVVLAGEN 423

Query: 613 EASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           E   R + ++   +   ++VS  +AI  + 
Sbjct: 424 EMQTRQVTLKNMETGEQRQVSPAEAITCIQ 453


>gi|229180680|ref|ZP_04308020.1| Histidyl-tRNA synthetase 2 [Bacillus cereus 172560W]
 gi|228602825|gb|EEK60306.1| Histidyl-tRNA synthetase 2 [Bacillus cereus 172560W]
          Length = 462

 Score = 67.9 bits (164), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 73/465 (15%), Positives = 150/465 (32%), Gaps = 64/465 (13%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWK--------IFQTLISY 282
              Y   +   +  +       + L    E+   +     +G +        ++Q +   
Sbjct: 7   HHGYNTLVPTVQTVEAGVFLFLLRLKQFEEEL-NMSIQIPRGTQDILPGTVELWQYIEGQ 65

Query: 283 MRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPM-N 340
            R   +  +Y+EI TP        +          ++   +      +  R+  L+P   
Sbjct: 66  AREICRRYNYKEIRTPIF---EHTELFLRGVGDTTDIVQKEMYSFQDRGERSLTLRPEGT 122

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
            P   +   + +      P +L   G ++R E   +     R R F Q       + +  
Sbjct: 123 APVVRSYVENKMFGDATQPTKLYYIGQMFRYERPQA----GRYRQFVQFGIEAIGSNDPA 178

Query: 401 FNECLKIHNLIISIYKDFGFEKIM--------------VKLSTRPEKRVGSDALWDDAEN 446
            +   ++  L +  Y+  G + I                + +         D    D ++
Sbjct: 179 IDA--EVIALAVEFYRGMGLKNIKVVLNSLGDAASRQAHRDALIAHFEPRIDEFCSDCQS 236

Query: 447 IMKG----VLDTIKNSSQDRINT-----GVLLGEGAFYGPK-----------FEYILKDA 486
            ++     +LD  K+ + + + T       L  + A Y  K           FE      
Sbjct: 237 RLEKNPLRILDCKKDRNHELMGTAPSITEYLNEDSAVYYEKVQELLTMMDVPFEKDPNLV 296

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHS--------EKCHPVMIHRAVFGSIERFIGIM 538
            G D+   T+    +    F A    S          E   P M       SIER I  +
Sbjct: 297 RGLDYYQHTVFEIMSEAEGFGAITTLSGGGRYNGLVQEIGGPEMPGIGFAMSIERLIMAL 356

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
            +     LPL    I   V  +   A ++A ++A  L+   LS+E D+ +  +  + +  
Sbjct: 357 -KAENIELPLE-HSIDCYVVALGEKAKDHAAKVAFDLRKAGLSVEKDYLDRKMKAQFKSA 414

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              K   + + G+ E  +  I ++   +   ++V+L      + +
Sbjct: 415 DRLKAKFVAVLGEDELDKGIINLKDMATGEQEEVALDVFASYVAE 459


>gi|299537316|ref|ZP_07050616.1| seryl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
 gi|298727207|gb|EFI67782.1| seryl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
          Length = 428

 Score = 67.9 bits (164), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 42/357 (11%), Positives = 111/357 (31%), Gaps = 48/357 (13%)

Query: 107 DFDKEQPFSSDELAQIEKKMQEIIARDSPF---LKQYLSHEKARELFESKKEAYKVEILE 163
           DF+       + +A+ E+   E            +   + ++         +  K   ++
Sbjct: 30  DFEDLDAKRRELIAKTEELKAERNKVSEQISIMKRNKENVDEIIARMRQVGDEIKEIDVQ 89

Query: 164 SIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
               +E+             R P++          +   +    W             G 
Sbjct: 90  LNNVEEHFKDMMM-------RLPNIPHESVPVGTTEDDNIEEYTW-------------GE 129

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYM 283
                 ++  +     + +  D  + A+           S  +F+   G ++ + L+++M
Sbjct: 130 IPTFDFDIKAHWDLATDLKIADFERGAKVTG--------SRFLFYRGLGARLERALMTFM 181

Query: 284 RRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
                +   YEE+  P ++++     +G+   +  ++F +        +   + + P   
Sbjct: 182 MDLHAEEHGYEEMLPPIIVNRDSLTGTGNLPKFEEDLFKL--------EETDYFMIPTAE 233

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKE 398
                 +   +     LP   A +   +R+E   +     GL+R   F + +   F   E
Sbjct: 234 VPVTNFYRDEILLAEALPQGFASYSPCFRSEAGSAGRDTRGLIRQHQFNKVELVRFVKPE 293

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENIMKGV 451
             + +   +      + +  G     +K+ T              +W  A+N+ + +
Sbjct: 294 DSYEQLELLTGHAEKVLQLLGLPYRKLKMCTADLGFTAAKKYDLEVWIPAQNMYREI 350


>gi|322831421|ref|YP_004211448.1| alanyl-tRNA synthetase [Rahnella sp. Y9602]
 gi|321166622|gb|ADW72321.1| alanyl-tRNA synthetase [Rahnella sp. Y9602]
          Length = 875

 Score = 67.9 bits (164), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 60/150 (40%), Gaps = 10/150 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGF-YYDFDKEQPFS 115
            S+E       R    + HS  H++  A++ +  +     G ++ D +  +DF   +   
Sbjct: 546 DSVEAEVDVARRDRIRLNHSATHLLHAALRQVLGKHVAQKGSLVNDNYLRFDFSHFEAMK 605

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            +E+ Q+E  +   I R+ P     +  ++A+E         K E        ++V +  
Sbjct: 606 PEEIRQVEDLVNAQIRRNLPIQTTIMDLDEAKEKGAMALFGEKYE--------DSVRVLS 657

Query: 176 QGEW-FDLCRGPHVRSTGQVKKFFKLMKVA 204
            G++  +LC G H   TG +  F    +  
Sbjct: 658 MGDFSTELCGGTHASRTGDIGLFRIQSESG 687


>gi|225550213|ref|ZP_03771173.1| glycyl-tRNA synthetase [Borrelia burgdorferi 118a]
 gi|225369325|gb|EEG98778.1| glycyl-tRNA synthetase [Borrelia burgdorferi 118a]
          Length = 445

 Score = 67.9 bits (164), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 62/432 (14%), Positives = 125/432 (28%), Gaps = 70/432 (16%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKDDYEEIN---TPQVLDQHLWQQSGHWDSYRANMF 319
           SG   +   G ++ + +     + +   +E I    +   +   +W+ SGH D +  +M 
Sbjct: 28  SGAWDYGPLGVELKKNIKKEWWKSMVYLHENIVGLDSAIFMRPEIWRASGHVDGFSDSMV 87

Query: 320 AVKCADDTIKDL--------------------------------------RTFALKPMNC 341
             K      +                                            L+P   
Sbjct: 88  DCKDCKSRFRADFIDLSKNCPNCKVGNNFTSPRSFNLMFKTHIGVVEDSSSEVYLRPETA 147

Query: 342 PGHVAVFNHGLKSYR-ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK-EQ 399
            G    F + L S R ++P  +A+ G  +RNE   + + + R   F Q +   F    + 
Sbjct: 148 QGIFVNFRNVLDSSRLKIPFGIAQVGKAFRNEIV-TKNFIFRTCEFEQMEMQFFVHPKQI 206

Query: 400 MFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSS 459
               C    N +    +        ++       ++   A         K   D      
Sbjct: 207 DEWFCYWQQNRMNFFIETLKISPDRLRFKAHDSTQLAHYA---------KAAFDI----- 252

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
           +     G    EG      ++           +      DF    ++  + + + +    
Sbjct: 253 EYEFPFGFQEVEGIHNRGNYDLTQHAKFSNKPKVFEYH-DFLTKEKYVPYVIETSAGLTR 311

Query: 520 PVMIHRAVFGSIERFIGIMIENFK---GNLPLWLSPIQAIVTTITSSAV--EYAQEIANL 574
            V++      S E     + +  K     L   L+P +  +  +       E A+ I   
Sbjct: 312 SVLMTLCDAYSEEE----LSDGDKRIVLRLHPKLAPYKIAIFPLVKKVELTEIARRIYME 367

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           L      I  D    TI  + R       P  +        + ++ +R   S T +++ +
Sbjct: 368 LCD-DFHIFYDDSG-TIGKRYRRQDEIGTPYCVTIDYNTIEDETVTVRERNSMTQKRIFI 425

Query: 635 LDAIPILTKESL 646
            D    +  E L
Sbjct: 426 NDLYSYIKTEIL 437


>gi|75908477|ref|YP_322773.1| histidyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
 gi|123731501|sp|Q3MAV8|SYH_ANAVT RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|75702202|gb|ABA21878.1| histidyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
          Length = 462

 Score = 67.9 bits (164), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 56/453 (12%), Positives = 137/453 (30%), Gaps = 74/453 (16%)

Query: 261 DGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDS---YRA 316
             SG   +     ++   L+  +RR  +   +  I TP V    + Q  G+      Y  
Sbjct: 11  TPSGFPEFLPSEKRLELYLLDTIRRVYESYGFTPIETPAVERLEVLQAKGNQGDNIIYGI 70

Query: 317 N--MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL--PVRLAEFGSVYRNE 372
           +  +   + A+           + +     V +  +  +   EL  P    +   V+R E
Sbjct: 71  DPILPPNRQAEKDKSGETGSEARALKFDQTVPLAAYIARHLNELTFPFARYQMDVVFRGE 130

Query: 373 PSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP- 431
            +       R R F Q D  V   ++       ++  +I  I++       +++++ R  
Sbjct: 131 RAKD----GRFRQFRQCDIDVVGREKLSLLYDAQMPAIITEIFEAVHIGDFLIRINNRKV 186

Query: 432 -EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG-------EGAFYGPKFEYIL 483
                 S  + +        ++D ++   + ++   +          +      K +  +
Sbjct: 187 LTGFFQSLDISETQIKSCISIIDNLEKIGEAKVKLELEKEGINPEQTQKIIDFIKIDGSV 246

Query: 484 KDAIGR---------------------DWQCGTIQVDFNLPSRFNAFYVNSHSEK----- 517
            D + +                     +     ++       RF      +         
Sbjct: 247 DDVLDKLKHLSQTLPESEQFNLGVSELETVITGVRNLGVPDKRFCIDLAIARGLNYYTGT 306

Query: 518 -------CHPVMIHRAVFGSIERFIGIMIENFKGNLPLW--------------------L 550
                   H  +      G  E  +G  I      + +                      
Sbjct: 307 VYETTLIGHEALGSICSGGRYEELVGTFIGEKMPGVGISIGLTRLISRLLKAGILNTLPP 366

Query: 551 SPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           +P Q +V  +  + +    +++  L+   L++ T+F    +  + +    + I   +I G
Sbjct: 367 TPAQVVVVNMQDNLMPTYLKVSQQLRQAGLNVITNFEKRQLGKQFQAADKQGIQFCVIIG 426

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             EA+ +   ++   S    +V+L D    + +
Sbjct: 427 ADEAAAQKSSLKDLKSGEQVEVALADLPEEVKR 459


>gi|206901044|ref|YP_002250743.1| alanyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
 gi|206740147|gb|ACI19205.1| alanyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
          Length = 866

 Score = 67.5 bits (163), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 43/189 (22%), Positives = 78/189 (41%), Gaps = 18/189 (9%)

Query: 12  GSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI-EIITPEDPRSL 70
           G + N  V     DV     + L +  +     GKV  L    +EG I +    ++ R  
Sbjct: 503 GKVYNSEVEVEILDV-----KKLGEDFIIHR--GKV--LKGEFKEGQIVKAEVDKEKRYH 553

Query: 71  AVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGF-YYDFDKEQPFSSDELAQIEKKMQEI 129
            +  H+  H++  A++       +  G ++   F  +DF    P S ++L  IEKK+ E 
Sbjct: 554 TMRHHTATHLLHSALREYLGTHVMQSGSLVSPEFLRFDFTHHSPLSYEDLKIIEKKVNEN 613

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVR 189
           I  +    K + + E+AR +        K +    +   +N+++   G       G HV 
Sbjct: 614 ILANHKVEKFWTTLEEARRMGAIALFTEKYQKNVRVIKIDNISMELCG-------GTHVD 666

Query: 190 STGQVKKFF 198
            TG++  F+
Sbjct: 667 YTGEIGSFY 675


>gi|24217038|ref|NP_714519.1| seryl-tRNA synthetase [Leptospira interrogans serovar Lai str.
           56601]
 gi|45659295|ref|YP_003381.1| seryl-tRNA synthetase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
 gi|30173162|sp|Q8EY78|SYS_LEPIN RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|59798552|sp|Q72LS1|SYS_LEPIC RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|24198447|gb|AAN51537.1| seryl-tRNA synthetase [Leptospira interrogans serovar Lai str.
           56601]
 gi|45602541|gb|AAS72018.1| seryl-tRNA synthetase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
          Length = 417

 Score = 67.5 bits (163), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 58/156 (37%), Gaps = 13/156 (8%)

Query: 272 GWKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
           G ++ + L+++M      + DY E+  P +++      +G +  ++   + +        
Sbjct: 171 GARLERALMNFMLDVHTKEHDYTEVWVPSMVNDESMMATGQYPKFKDEFYRI-------- 222

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGF 386
           D     L P        ++   +    +LP+ +    S +R E         GL+RV  F
Sbjct: 223 DKDELNLIPTAEVPLTNLYRDEIIPEDQLPISVTAHTSCFRREAGSYGKDTRGLVRVHQF 282

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            + +   FC  E    E  K+ +   +I K      
Sbjct: 283 QKVELVKFCKPEDSEEEHKKMLSHAENILKKLELPY 318


>gi|110598390|ref|ZP_01386663.1| seryl-tRNA synthetase [Chlorobium ferrooxidans DSM 13031]
 gi|110339999|gb|EAT58501.1| seryl-tRNA synthetase [Chlorobium ferrooxidans DSM 13031]
          Length = 429

 Score = 67.5 bits (163), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 32/221 (14%), Positives = 73/221 (33%), Gaps = 21/221 (9%)

Query: 244 RDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEINTP 297
           ++H +L + + +          G+G   +  KG ++ + LI++M     +   Y E+  P
Sbjct: 142 KNHLELGKSLGILDFERGAKVSGAGFPAYMGKGARLERALINFMLDMHTENHGYTEVFPP 201

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
             +++   + +G W  +   ++ ++  D            P        +    +     
Sbjct: 202 FFVNRESLRGTGQWPKFADQVYHMQEDD--------LYAIPTAEVPVTNLHRGEMLDNGA 253

Query: 358 LPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           LP+  A + + +R E         G +RV  F + +   F   E+ +    +I     +I
Sbjct: 254 LPISYAAYSACFRREAGSYGKDTRGFLRVHQFNKVEMVKFTRPEESYEALEQIRRNAEAI 313

Query: 415 YKDFGFEKI----MVKLSTRPEKRVGSDALWDDAENIMKGV 451
                             +    +     +W  AE      
Sbjct: 314 LIALKIPYRVLLLCSGDISANAAKCYDIEVWSPAEQKYLEA 354


>gi|255284141|ref|ZP_05348696.1| alanine--tRNA ligase [Bryantella formatexigens DSM 14469]
 gi|255265315|gb|EET58520.1| alanine--tRNA ligase [Bryantella formatexigens DSM 14469]
          Length = 879

 Score = 67.5 bits (163), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 31/140 (22%), Positives = 63/140 (45%), Gaps = 10/140 (7%)

Query: 67  PRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDELAQIEKK 125
            R+     HS  H++ +A++++        G  +  D   +DF    P +++E+A+ E  
Sbjct: 558 KRADTCKNHSATHLLQKALKTVLGAHVEQKGSLVTPDRLRFDFAHFAPMTAEEIAKTEAL 617

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCR 184
           + E IA   P + Q ++ E+A++         K          ++V +   G++  +LC 
Sbjct: 618 VNEQIAASLPVVTQIMNIEEAKKTGAMALFGEKY--------ADDVRVVSMGDFSKELCG 669

Query: 185 GPHVRSTGQVKKFFKLMKVA 204
           G HV +TG +  F  + +  
Sbjct: 670 GTHVSNTGMITTFKIVSESG 689


>gi|193212290|ref|YP_001998243.1| seryl-tRNA synthetase [Chlorobaculum parvum NCIB 8327]
 gi|238692624|sp|B3QM90|SYS_CHLP8 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|193085767|gb|ACF11043.1| seryl-tRNA synthetase [Chlorobaculum parvum NCIB 8327]
          Length = 427

 Score = 67.5 bits (163), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 35/221 (15%), Positives = 77/221 (34%), Gaps = 21/221 (9%)

Query: 244 RDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEINTP 297
           +DH +L + + L          G+G   +  KG ++ + LI++M         Y E+  P
Sbjct: 142 KDHLELGKSLGLLDFERGAKITGAGFPVYTGKGARLERALINFMLDTHSANHGYTEVFPP 201

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++++   + +G W  +   ++ +                P        +    +    +
Sbjct: 202 FMVNKESLRGTGQWPKFADQVYHM--------PEDGLYAIPTAEVPVTNLHRGEMLEDDK 253

Query: 358 LPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           LP+  A + + +R E         G +RV  F + +   F   E+ +    +I +   +I
Sbjct: 254 LPIAYAAYSACFRREAGSYGKDTRGFLRVHQFNKVEMVRFTRPEKSYEALEEILSHAEAI 313

Query: 415 YKDFGFEKIMVKLSTRPEK----RVGSDALWDDAENIMKGV 451
                    ++ L +        +     +W  AEN     
Sbjct: 314 LCALKIPYRVITLCSGDISANAAKCYDIEVWSPAENKYLEA 354


>gi|187918093|ref|YP_001883656.1| alanyl-tRNA synthetase [Borrelia hermsii DAH]
 gi|205829992|sp|B2RZT0|SYA_BORHD RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|119860941|gb|AAX16736.1| alanyl-tRNA synthetase [Borrelia hermsii DAH]
          Length = 593

 Score = 67.5 bits (163), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 55/130 (42%), Gaps = 10/130 (7%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           H+  H++ +A+Q +  E     G  I  +   +DF+     + DE+ Q+E  +   I   
Sbjct: 456 HTATHLLHKALQLVLGEHVRQKGSNITAERLRFDFNHPYKMTDDEIKQVEDMVNLQIKNK 515

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTG 192
               +  ++ + A           K E +        V++Y    +  ++C GPHV++TG
Sbjct: 516 LSVKRSVMNLDDALAKGAMALFGEKYEDI--------VSVYEIDGFSIEVCGGPHVKNTG 567

Query: 193 QVKKFFKLMK 202
           ++  F    +
Sbjct: 568 ELGTFKIQKE 577


>gi|227893458|ref|ZP_04011263.1| histidyl-tRNA synthetase [Lactobacillus ultunensis DSM 16047]
 gi|227864737|gb|EEJ72158.1| histidyl-tRNA synthetase [Lactobacillus ultunensis DSM 16047]
          Length = 428

 Score = 67.5 bits (163), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 62/414 (14%), Positives = 123/414 (29%), Gaps = 71/414 (17%)

Query: 276 FQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           +Q +    R      +Y EI TP       ++         + +   +  D   K  R  
Sbjct: 20  WQKVEEVARNFFNRANYREIRTP---SFENYEIFSRSSGDSSEIVEKQMYDFNDKGGRHI 76

Query: 335 ALKPMNCPGHVAVF--NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
           AL+P    G V  +  +         P  +    S +R E   +     R R F Q    
Sbjct: 77  ALRPEGTAGVVRAYVEDKMYAPEVVKPFNVFYMESTFRYERPQA----GRQREFHQIGVE 132

Query: 393 VFCTKEQMFNECLKIHNL----------IISIYKDFGFEKIMVKLSTRPEKRVG--SDAL 440
            F +   + +    +                     G E++                D L
Sbjct: 133 SFGSSNPLADVQTIMMGHDLLGELGVKNYQLHINTLGNEQVRQDYHDALVNYFTPVKDEL 192

Query: 441 WDDAENIMKG----VLDT------------------------------IKNSSQDRINTG 466
            +D++  ++     +LD+                              +K   Q  I+  
Sbjct: 193 SEDSQRRLRDNPLRILDSKDDRDKKFLPDAPKIRDFLDDDSKQNFETILKMLDQLGIDYV 252

Query: 467 VLL----GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
           +      G   + G  FE++++D    +     +        R++      +      V 
Sbjct: 253 IDDDLVRGLDYYTGVIFEFMVEDKSLWESATTILGGG-----RYDHLVEEFNGPATPAV- 306

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSI 582
                FG  E  + +++E     L      I   +T I     + A EI   L+      
Sbjct: 307 ----GFGIGEERLMLVLEKQNPAL-FKQHGIDFFITNIGEGTAQKAIEITRSLRKQGFEA 361

Query: 583 ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
           + D   + +  + ++        +I  G+KE +   + ++R     T  ++L D
Sbjct: 362 DFDVNQKKLKAQFKKADRDHAKYVITLGEKELANGILNVKRLADGKTIDLNLED 415


>gi|108808831|ref|YP_652747.1| alanyl-tRNA synthetase [Yersinia pestis Antiqua]
 gi|122382877|sp|Q1C420|SYA_YERPA RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|108780744|gb|ABG14802.1| alanyl-tRNA synthetase [Yersinia pestis Antiqua]
          Length = 738

 Score = 67.5 bits (163), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 62/151 (41%), Gaps = 10/151 (6%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGF-YYDFDKEQPFSS 116
           S+E +     R+   + HS  H++  A++++  E     G ++ D +  +DF   +    
Sbjct: 547 SVEALVDVVRRNRIRLNHSATHLLHAALRNVLGEHVAQKGSLVNDKYLRFDFSHFEAMKP 606

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
           +++  +E  + E I R+ P   + +  + A+E         K          + V +   
Sbjct: 607 EQIRLVEDLVNEQIRRNMPVQTEVMELDAAKEKGAMALFGEKY--------DDQVRVLTM 658

Query: 177 GEW-FDLCRGPHVRSTGQVKKFFKLMKVAGA 206
           G++  +LC G H   TG +  F  L +    
Sbjct: 659 GDFSTELCGGTHASRTGDIGLFRILTESGSN 689


>gi|294677289|ref|YP_003577904.1| alanyl-tRNA synthetase [Rhodobacter capsulatus SB 1003]
 gi|294476109|gb|ADE85497.1| alanyl-tRNA synthetase [Rhodobacter capsulatus SB 1003]
          Length = 884

 Score = 67.5 bits (163), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 39/171 (22%), Positives = 72/171 (42%), Gaps = 12/171 (7%)

Query: 36  KKAVAVAIN-GKVCDLSDPVREGSIEIITPEDPRSLAVI-RHSCAHIMAEAVQSIWPEVQ 93
           KK   V I+ G+V +    V  G    +  +  R  A+   HS  H++ EA++    +  
Sbjct: 522 KKVAGVFIHIGEVVE--GKVTRGQPAKLEVDHARRSAIRANHSATHLLHEALRRALGDHV 579

Query: 94  VAIGP-IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKAREL--- 149
              G    ED   +DF   +  +++EL  +E ++   I +++P   + ++ + AR L   
Sbjct: 580 AQKGSLNAEDRLRFDFSHGKAMTAEELMTVEAEVNAFIRQNTPVETRIMTPDDARGLGAQ 639

Query: 150 ---FESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
               E   +  +V  +  +         R     +LC G HV+ TG +  F
Sbjct: 640 ALFGEKYGDEVRVVSMGELLGSGKGHDGRT-YSLELCGGTHVKRTGDIGAF 689


>gi|329910977|ref|ZP_08275424.1| Seryl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480]
 gi|327546036|gb|EGF31113.1| Seryl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480]
          Length = 431

 Score = 67.5 bits (163), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 39/219 (17%), Positives = 77/219 (35%), Gaps = 13/219 (5%)

Query: 245 DHRKLAREMDL-FHIAEDGSGVIFWHRKG--WKIFQTLISYMRRKI--KDDYEEINTPQV 299
           DH  +   + L F +A   +G  F   KG   ++ + L  +M      +  Y E  TP +
Sbjct: 138 DHVDIGAPLGLDFDVAVKLTGSRFSVMKGGIARLHRALAQFMLDTHTGEHGYTECYTPYI 197

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           ++    + +G    + A +FAVK       +  T  L P +      +    + +  +LP
Sbjct: 198 VNADSLRGTGQLPKFEAELFAVKKGGQE-GEGETLYLIPTSEVSLTNIVRDQIIAIDDLP 256

Query: 360 VRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           V++      +R+E         G++R   F + +       EQ F    ++      I +
Sbjct: 257 VKMTAHTPCFRSEAGSYGRDTRGMIRQHQFDKVEMVQVVHPEQSFAVLEEMVGHAEVILQ 316

Query: 417 DFGFEKI----MVKLSTRPEKRVGSDALWDDAENIMKGV 451
             G                  +     +W  A+   + +
Sbjct: 317 KLGLPYRVVSLCTGDIGFSATKTYDIEVWLPAQKTYREI 355


>gi|114775361|ref|ZP_01450929.1| alanyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1]
 gi|114553472|gb|EAU55853.1| alanyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1]
          Length = 871

 Score = 67.5 bits (163), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 31/141 (21%), Positives = 55/141 (39%), Gaps = 9/141 (6%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSD 117
           +     ED R+     H+  H+M   ++ +  E     G  + E    +DF+  +P S +
Sbjct: 549 VHFAVDEDRRAAIRRNHTATHLMHAVLRKVLGEHVKQAGSLVNEQRLRFDFNHFKPVSEE 608

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           E   IE ++   I  + P   + +S ++A           K          + V +   G
Sbjct: 609 ERKVIEAEVNAAIWANDPVETKLMSQDEAVASGAMALFGEKY--------GDEVRVVSAG 660

Query: 178 EWFDLCRGPHVRSTGQVKKFF 198
              +LC G HV +TG +  F 
Sbjct: 661 FSTELCGGTHVSATGDIGPFR 681


>gi|262305797|gb|ACY45491.1| glu- + pro-tRNA synthetase [Streptocephalus seali]
          Length = 134

 Score = 67.5 bits (163), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 47/132 (35%), Gaps = 16/132 (12%)

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
           GA +    E  +  A GR  Q  T  +     S+        + E      + +  +G  
Sbjct: 1   GADFTTTVEAFVP-ASGRGIQGATSHLLGQNFSKMFDIGF-ENPETKERSHVWQNSWGLT 58

Query: 532 ERFIGIMIENFKGNLPLWLSP----IQAIVTT----------ITSSAVEYAQEIANLLKS 577
            R IG+++     N  L L P     Q ++               +  +  +E+   LK+
Sbjct: 59  TRTIGVLVMVHADNKGLVLPPRVACTQVVIVPCGITAETKDEDRKTHYDLCKELEKELKA 118

Query: 578 HHLSIETDFRNE 589
             + +E D+R+ 
Sbjct: 119 GGIRVEGDYRDN 130


>gi|188518695|ref|ZP_03004122.1| seryl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str. ATCC
           33695]
 gi|188997689|gb|EDU66786.1| seryl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str. ATCC
           33695]
          Length = 418

 Score = 67.5 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 39/243 (16%), Positives = 82/243 (33%), Gaps = 21/243 (8%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAEDG----SGVIFWHRKGWKIF 276
           G   N   E+ +     +       H  LA +  L    +      S  I +   G +++
Sbjct: 116 GNDENDNVEIKKVFEPRKFDFSPLAHWDLAAKNKLIDFDKSTKITGSRFIIYTNFGARLY 175

Query: 277 QTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFA 335
           + L  + +   +K  + EI  P +++Q     SG+   +  ++F +        +   + 
Sbjct: 176 RALQQFCLDMNVKAGFNEIWAPVIVNQESLIGSGNLPKFVDDLFKL--------ENSNYY 227

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAH 392
           L P        +  + +    +LP+        +R+E   +   + G++R   F + +  
Sbjct: 228 LSPTAEVQLTNLHRNEILKASDLPLYYTALTPCFRSEAGSAGRDVRGVIRQHQFHKVELV 287

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIM 448
             C  E  F E   +     SI +        + L T              +W  + N  
Sbjct: 288 KLCKPEDSFKELESMTRQAESILEALELPYRRIALCTGDLGFSSAKTYDLEVWLPSYNAY 347

Query: 449 KGV 451
           K +
Sbjct: 348 KEI 350


>gi|185178824|ref|ZP_02964612.1| seryl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str. ATCC
           27817]
 gi|188024432|ref|ZP_02997087.1| seryl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str. ATCC
           27819]
 gi|209554387|ref|YP_002284526.1| seryl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str. ATCC
           33699]
 gi|225551523|ref|ZP_03772469.1| serine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
 gi|238065110|sp|B5ZAT6|SYS_UREU1 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|184209459|gb|EDU06502.1| seryl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str. ATCC
           27817]
 gi|188018723|gb|EDU56763.1| seryl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str. ATCC
           27819]
 gi|209541888|gb|ACI60117.1| seryl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str. ATCC
           33699]
 gi|225379338|gb|EEH01703.1| serine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
          Length = 418

 Score = 67.5 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 39/243 (16%), Positives = 82/243 (33%), Gaps = 21/243 (8%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAEDG----SGVIFWHRKGWKIF 276
           G   N   E+ +     +       H  LA +  L    +      S  I +   G +++
Sbjct: 116 GNDENDNVEIKKVFEPRKFDFSPLAHWDLAAKNKLIDFDKSTKITGSRFIIYTNFGARLY 175

Query: 277 QTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFA 335
           + L  + +   +K  + EI  P +++Q     SG+   +  ++F +        +   + 
Sbjct: 176 RALQQFCLDMNVKAGFNEIWAPVIVNQESLIGSGNLPKFVDDLFKL--------ENSNYY 227

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAH 392
           L P        +  + +    +LP+        +R+E   +   + G++R   F + +  
Sbjct: 228 LSPTAEVQLTNLHRNEILKASDLPLYYTALTPCFRSEAGSAGRDVRGVIRQHQFHKVELV 287

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIM 448
             C  E  F E   +     SI +        + L T              +W  + N  
Sbjct: 288 KLCKPEDSFKELESMTRQAESILEALELPYRRIALCTGDLGFSSAKTYDLEVWLPSYNAY 347

Query: 449 KGV 451
           K +
Sbjct: 348 KEI 350


>gi|330837065|ref|YP_004411706.1| alanyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
 gi|329748968|gb|AEC02324.1| alanyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
          Length = 598

 Score = 67.5 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 32/135 (23%), Positives = 60/135 (44%), Gaps = 10/135 (7%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEK 124
           D   L    H+  H++ +A++++        G  I  +   +DF   +P + +++ Q+E 
Sbjct: 452 DHSELTTALHTATHLLHQALRTVLGTHVGQKGSNITVERLRFDFTHPEPMTKEQIQQVED 511

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLC 183
            + E I R+    K+  + E+A++         K          E VT+Y  G +  ++C
Sbjct: 512 IVNEQIKRNLTVTKKTETLEEAQKEGAIAFFESKY--------GELVTVYSIGNFSKEVC 563

Query: 184 RGPHVRSTGQVKKFF 198
            GPHV  TG +  F 
Sbjct: 564 GGPHVTHTGDMGHFH 578


>gi|238756253|ref|ZP_04617569.1| Alanyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
 gi|238705508|gb|EEP97909.1| Alanyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
          Length = 874

 Score = 67.5 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 29/151 (19%), Positives = 61/151 (40%), Gaps = 10/151 (6%)

Query: 56  EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGF-YYDFDKEQPF 114
             S++ +     R+   + HS  H++  A++    E     G ++ D +  +DF   +  
Sbjct: 544 NDSVDAVVDSMRRNRIRLNHSATHLLHAALRKTLGEHVAQKGSLVNDKYLRFDFSHFEAM 603

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
             +++ Q+E  +   I R+ P   + +  ++A+E         K          + V + 
Sbjct: 604 KPEQIRQVEDLVNAQIRRNLPIQTELMELDEAKEKGAMALFGEKY--------DDQVRVL 655

Query: 175 RQGEW-FDLCRGPHVRSTGQVKKFFKLMKVA 204
             G++  +LC G H   TG +  F  L +  
Sbjct: 656 TMGDFSTELCGGIHANRTGDIGLFRILTESG 686


>gi|163731786|ref|ZP_02139233.1| alanyl-tRNA synthetase [Roseobacter litoralis Och 149]
 gi|161395240|gb|EDQ19562.1| alanyl-tRNA synthetase [Roseobacter litoralis Och 149]
          Length = 885

 Score = 67.5 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 43/140 (30%), Positives = 67/140 (47%), Gaps = 8/140 (5%)

Query: 66  DPRSLAVIR--HSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDELAQI 122
           DP     IR  HS  H++ EA++    +     G    ED   +DF   Q  SS+ELA++
Sbjct: 551 DPARRTAIRANHSATHLLHEALREALGDHVAQRGSLNAEDRLRFDFSHTQALSSEELARV 610

Query: 123 EKKMQEIIARDSPFLKQYLSHEKAREL--FESKKEAYKVEI-LESIPAKENVTLYRQGEW 179
           E  +   I +++P   + ++ + AREL       E Y  E+ + S+  KE       G+ 
Sbjct: 611 EADVNTYIRQNAPVETRIMTPDAARELGAQALFGEKYGDEVRVVSMGRKEGSAKGLNGDT 670

Query: 180 F--DLCRGPHVRSTGQVKKF 197
           +  +LC G HVR TG +  F
Sbjct: 671 YSLELCGGTHVRQTGDIGAF 690


>gi|262172368|ref|ZP_06040046.1| alanyl-tRNA synthetase [Vibrio mimicus MB-451]
 gi|261893444|gb|EEY39430.1| alanyl-tRNA synthetase [Vibrio mimicus MB-451]
          Length = 860

 Score = 67.5 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 61/143 (42%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFS 115
             ++ I  E  R+   + HS  H++  A++ +  E     G ++  +   +DF   +  +
Sbjct: 545 DQVDAIVDEQRRAAISLNHSATHLLHAALRKVLGEHVAQKGSLVRAETLRFDFSHLEAMT 604

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           + E+ ++E+ + + I R+       ++ ++A+          K          + V +  
Sbjct: 605 AAEIKEVERLVNQEIRRNHSIETNIMNIDEAKAKGAMALFGEKY--------DDQVRVLS 656

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G++  +LC G H  +TG +  F
Sbjct: 657 MGDFSTELCGGIHASNTGDIGLF 679


>gi|258623515|ref|ZP_05718516.1| alanyl-tRNA synthetase [Vibrio mimicus VM573]
 gi|258584177|gb|EEW08925.1| alanyl-tRNA synthetase [Vibrio mimicus VM573]
          Length = 860

 Score = 67.5 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 61/143 (42%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFS 115
             ++ I  E  R+   + HS  H++  A++ +  E     G ++  +   +DF   +  +
Sbjct: 545 DQVDAIVDEQRRAAISLNHSATHLLHAALRKVLGEHVAQKGSLVRAETLRFDFSHLEAMT 604

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           + E+ ++E+ + + I R+       ++ ++A+          K          + V +  
Sbjct: 605 AAEIKEVERLVNQEIRRNHSIETNIMNIDEAKAKGAMALFGEKY--------DDQVRVLS 656

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G++  +LC G H  +TG +  F
Sbjct: 657 MGDFSTELCGGIHASNTGDIGLF 679


>gi|229032054|ref|ZP_04188036.1| Histidyl-tRNA synthetase 2 [Bacillus cereus AH1271]
 gi|228729246|gb|EEL80241.1| Histidyl-tRNA synthetase 2 [Bacillus cereus AH1271]
          Length = 476

 Score = 67.5 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 75/465 (16%), Positives = 151/465 (32%), Gaps = 64/465 (13%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWK--------IFQTLISY 282
              Y   +   +  +       + L    E+   +     +G +        ++Q +   
Sbjct: 21  HHGYNTLVPTVQTVEAGVFLFLLRLKQFEEEL-NMSIQIPRGTQDILPGTVELWQYIEGQ 79

Query: 283 MRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPM-N 340
            R   +  +Y+EI TP        +          ++   +      +  R+  L+P   
Sbjct: 80  AREICRRYNYKEIRTPIF---EHTELFLRGVGDTTDIVQKEMYSFQDRGERSLTLRPEGT 136

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
            P   +   + +      P +L   G ++R E   +     R R F Q       + +  
Sbjct: 137 APVVRSYVENKMFGDATQPTKLYYIGQMFRYERPQA----GRYRQFVQFGIEAIGSNDPA 192

Query: 401 FNECLKIHNLIISIYKDFGFEKI---MVKLSTRPEKRVGSDALWDDAENIMKG------- 450
            +   ++  L +  Y+  G + I   +  L     ++   DAL    E  +         
Sbjct: 193 IDA--EVIALAVEFYRGMGLKNIKVVLNSLGDAASRQAHRDALIAHFEPRIGEFCSDCQS 250

Query: 451 --------VLDTIKNSSQDRINT-----GVLLGEGAFYGPK-----------FEYILKDA 486
                   +LD  K+ + + + T       L  + A Y  K           FE      
Sbjct: 251 RLEKNPLRILDCKKDRNHELMGTAPSITEYLNEDSAVYYDKVQELLTMMDVPFEKDPNLV 310

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHS--------EKCHPVMIHRAVFGSIERFIGIM 538
            G D+   T+    +    F A    S          E   P M       SIER I  +
Sbjct: 311 RGLDYYQHTVFEIMSEAEGFGAITTLSGGGRYNGLVQEIGGPEMPGIGFAMSIERLIMAL 370

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
            +     LP+    I   V  +   A ++A ++A  L+   LS+E D+ +  +  + +  
Sbjct: 371 -KAENIELPIE-HSIDCYVVALGEKAKDHAAKVAFDLRKAGLSVEKDYLDRKMKAQFKSA 428

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              K   + + G+ E  +  I ++   +   ++V+L      + +
Sbjct: 429 DRLKAKFVAVLGEDELDKGIINLKDMATGEQEEVALDVFASYVAE 473


>gi|148240241|ref|YP_001225628.1| seryl-tRNA synthetase [Synechococcus sp. WH 7803]
 gi|166223303|sp|A5GN16|SYS_SYNPW RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|147848780|emb|CAK24331.1| Seryl-tRNA synthetase [Synechococcus sp. WH 7803]
          Length = 425

 Score = 67.5 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 35/244 (14%), Positives = 76/244 (31%), Gaps = 20/244 (8%)

Query: 220 IYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDL----FHIAEDGSGVIFWHRKGWKI 275
             G   N   E+  +     +    +H  +A  + L      +    S  +    +G ++
Sbjct: 117 PDGRDENDNIEVRSWGDPRRQEGLDEHWAIADRLGLLDSERSVRIAQSRFVTLFGQGARL 176

Query: 276 FQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
            + LI++M        Y E+  P +++      SG    +    F     D         
Sbjct: 177 ERALINFMLDLHTGKGYREVLPPVLVNSASLTGSGQLPKFAEESFRCADDD--------L 228

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDA 391
            L P       ++    +    +LP+R   +   +R E         GL+R+  F + + 
Sbjct: 229 WLTPTAEVPLTSLHRDEIIPLDQLPLRYVAYSPCFRREAGSYGRDTRGLIRLHQFNKVEL 288

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP----EKRVGSDALWDDAENI 447
           + F   +        I     ++ +       +++L T        R     +W      
Sbjct: 289 YWFVHPDHADEAHAAITADAEAVLQALELPYRVLELCTGDLGFSAARTYDLEVWLAGAGA 348

Query: 448 MKGV 451
            + +
Sbjct: 349 YREI 352


>gi|317133698|ref|YP_004093012.1| seryl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
 gi|315471677|gb|ADU28281.1| seryl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
          Length = 429

 Score = 67.5 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 54/351 (15%), Positives = 111/351 (31%), Gaps = 50/351 (14%)

Query: 107 DFDKEQPFSSDELAQ-------IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKV 159
           + D +     D+L +        EK  Q   ++  P LK+    E+A+ L    K     
Sbjct: 24  EIDIDAVLRLDDLRRSLILSTDAEKSEQNQSSKQIPVLKKEGKQEEAQALLARMK----- 78

Query: 160 EILESIPAKE-NVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLS 218
           E+ + I   +  +    +     L   P+V      +               D +  +  
Sbjct: 79  ELSDDIKENDAKLRETEEALRAQLLSIPNVPHESVPEG-------------QDDSENVEK 125

Query: 219 RIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQT 278
           R +GT  +   E   +     +    D  + A+               F+   G ++ + 
Sbjct: 126 RRFGTPRDFGFEPQAHWDIGAKLGILDPERAAKVTGARF--------HFYKGLGARLERA 177

Query: 279 LISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALK 337
           +I+Y +     + Y EI  P ++++     +G    +  + F +        D     L 
Sbjct: 178 VINYFLNTHTANGYTEILPPFLVNRASMTGTGQLPKFEDDAFHI--------DKEDLFLI 229

Query: 338 PMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVF 394
           P             +    +LP++   + + +R E   +     GL+R   F + +   F
Sbjct: 230 PTAEVPVTNFHRDEILDGAQLPIKYCAYSACFREEAGSAGRDTRGLIRQHQFNKVELVKF 289

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALW 441
              E  + E  K+      + +  G    +V L                +W
Sbjct: 290 VRPEDSYEELEKLTGDAERVLQGLGLPYHVVTLCAGDLGFSSAKTYDIEVW 340


>gi|251778552|ref|ZP_04821472.1| serine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E Beluga']
 gi|243082867|gb|EES48757.1| serine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E Beluga']
          Length = 425

 Score = 67.5 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 39/236 (16%), Positives = 89/236 (37%), Gaps = 22/236 (9%)

Query: 220 IYGTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWK 274
             G       E+ ++    + + E + H  L  ++++          GS    +   G +
Sbjct: 115 PDGETDEDNVEIKKWGEPTKFNFEPKAHWDLGTDLNILDFERGGKVAGSRFTVYKGLGAR 174

Query: 275 IFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           + +++I+Y   K   ++ Y EI  P ++++     +G    +  + F V        +  
Sbjct: 175 LERSIINYFLDKHTTENGYTEILPPYMVNRDSMTGTGQLPKFEEDAFKV--------ENN 226

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQD 389
            + L P        ++ + + S   LP++ A + + +R E   +     GL+R   F + 
Sbjct: 227 GYFLIPTAEVPVTNMYRNEVLSGDILPIKHAAYSACFRAEAGSAGRDTRGLVRQHQFNKV 286

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALW 441
           +   FC  E  ++E  K+     S+ +  G    +V++                +W
Sbjct: 287 ELVKFCKPEDSYDELNKLVEDAESVLQGLGLPYRIVRICKGDLGFTAALKYDIEVW 342


>gi|212224873|ref|YP_002308109.1| histidyl-tRNA synthetase [Thermococcus onnurineus NA1]
 gi|212009830|gb|ACJ17212.1| histidyl-tRNA synthetase [Thermococcus onnurineus NA1]
          Length = 437

 Score = 67.5 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 42/199 (21%), Positives = 70/199 (35%), Gaps = 18/199 (9%)

Query: 448 MKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFN 507
           +  +L          I+ G+  G   +    FE I  + +G     G  + D NL   F 
Sbjct: 250 LVELLKAYGVYDFILIDLGIARGFDYYTSVVFEAIAPNDLGIGSIGGGGRYD-NLIEVFG 308

Query: 508 AFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP-LWLSPIQAIVTTITSSAVE 566
                       P        G IER I I+   ++G +P   L P    V  I      
Sbjct: 309 ----------GKPTPATGFAIG-IERLIPIL--EWRGLIPEPKLRPD-VYVIPIGKELEL 354

Query: 567 YAQ--EIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRF 624
            A+  EIA  L+   ++ + D     +   +       +P +I+ G K+ +E  + IR  
Sbjct: 355 RAKAIEIAQSLRKKGITADYDLMGRKLKKALDYAGRLGVPYVILVGKKDLAEGKVTIRDM 414

Query: 625 GSTTTQKVSLLDAIPILTK 643
            S     V +      L++
Sbjct: 415 ESGEQIAVKIERVSEELSR 433


>gi|320161762|ref|YP_004174987.1| seryl-tRNA synthetase [Anaerolinea thermophila UNI-1]
 gi|319995616|dbj|BAJ64387.1| seryl-tRNA synthetase [Anaerolinea thermophila UNI-1]
          Length = 424

 Score = 67.5 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 29/178 (16%), Positives = 60/178 (33%), Gaps = 16/178 (8%)

Query: 272 GWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G ++ + LI++M    I+  Y E   P ++       SG    +R N++           
Sbjct: 169 GARLQRALIAWMLDLHIRQGYREAYLPFMVKGDTLYASGQLPKFRDNLY--------HDI 220

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
                + P        +    +   ++LP+R   +   +R E       + G+ R   F 
Sbjct: 221 EEDLWMVPTAEVPLTGLHMGEVLDEKQLPLRYTAYTPCFRREKMSAGRDVRGIKRGHQFD 280

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALW 441
           + + +++   E    E  K+         + G    +V+L T              +W
Sbjct: 281 KVEMYIYSKPEDSMKELQKMLADAEQTCAELGLAYRVVQLCTGDLGFGAAITYDLEVW 338


>gi|319655041|ref|ZP_08009111.1| seryl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
 gi|317393265|gb|EFV74033.1| seryl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
          Length = 425

 Score = 67.5 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 49/381 (12%), Positives = 120/381 (31%), Gaps = 45/381 (11%)

Query: 80  IMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQ 139
            +    + +  ++Q     + + G + D D ++     E  Q++ K  E+  + +   ++
Sbjct: 6   FLRANFEEVKNKLQHRGEDLTDLGKFEDLDVKRRELIVEAEQLKSKRNEVSQQVAALKRE 65

Query: 140 YLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFK 199
               +             K          E +    +     L   P++          +
Sbjct: 66  KQDADHLIAEMREVGGKIKAL-------DEELRTVEEELDQLLLSIPNIPHESVPVGETE 118

Query: 200 LMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIA 259
              V    W             G       E   +     + +  D  + ++        
Sbjct: 119 DDNVEIRKW-------------GEVREFDFEPKPHWDVATDLDLLDFERASKVTG----- 160

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRAN 317
              S  +F+   G ++ + L ++M     D   Y+E+  P ++++     +G    +  +
Sbjct: 161 ---SRFVFYKGLGARLERALFNFMLDLHTDEHGYKEVLPPYMVNRTSMTGTGQLPKFEED 217

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS- 376
            F +        +   + L P        +    + +  ELP+  A F + +R+E   + 
Sbjct: 218 AFLI--------ESEDYFLIPTAEVPVTNMHREEILNADELPINYAAFSACFRSEAGSAG 269

Query: 377 --LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
               GL+R   F + +   F   E+ + E  K+      + +  G    ++ + T     
Sbjct: 270 RDTRGLIRQHQFNKVELVKFVKPEESYEELEKLTGHAEKVLQMLGLPYRVMSMCTGDLGF 329

Query: 435 V----GSDALWDDAENIMKGV 451
                    +W  + N  + +
Sbjct: 330 TAAKKYDIEVWIPSYNTYREI 350


>gi|310658795|ref|YP_003936516.1| alanyl-tRNA synthetase [Clostridium sticklandii DSM 519]
 gi|308825573|emb|CBH21611.1| alanyl-tRNA synthetase [Clostridium sticklandii]
          Length = 882

 Score = 67.5 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 35/154 (22%), Positives = 70/154 (45%), Gaps = 11/154 (7%)

Query: 46  KVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIED-GF 104
           +V      + +   E++  E  R      H+C H++ +A++ +        G ++ D   
Sbjct: 540 EVVSGEAKLSDKC-ELVVDEKLRKSTQRNHTCTHLLHKALRQVLGAHIHQAGSLVSDTRL 598

Query: 105 YYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES 164
            +DF   +P +S++L+QIE  + E I +  P   + ++ E+A++         K E    
Sbjct: 599 RFDFTHFEPITSEQLSQIENMVNEAIFKAYPVKVEVMNIEEAKKSGAMALFDEKYE---- 654

Query: 165 IPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
               +NV +   GE+  +LC G HV ++  +  F
Sbjct: 655 ----DNVRVVSVGEFSTELCGGTHVSNSSDIGMF 684


>gi|225377640|ref|ZP_03754861.1| hypothetical protein ROSEINA2194_03291 [Roseburia inulinivorans DSM
           16841]
 gi|225210504|gb|EEG92858.1| hypothetical protein ROSEINA2194_03291 [Roseburia inulinivorans DSM
           16841]
          Length = 886

 Score = 67.5 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 31/150 (20%), Positives = 63/150 (42%), Gaps = 10/150 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFS 115
             + +    D R      HS  H++ +A++ +        G   + +   +DF   Q  +
Sbjct: 555 DKVTLSVDADLRGKTCKNHSATHLLQKALREVLGTHVEQAGSYQDAERTRFDFSHFQAMT 614

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           ++E+A++EK + + IA D       ++ E+A++         K          E V +  
Sbjct: 615 AEEIAKVEKIVNDEIAADLEVRTDVMTVEEAKKTGAMALFGEKY--------GEKVRVVS 666

Query: 176 QGEW-FDLCRGPHVRSTGQVKKFFKLMKVA 204
            GE+  + C G HV+ TG++  F  + +  
Sbjct: 667 MGEFSKEFCGGTHVKHTGEIAAFKIISESG 696


>gi|228910239|ref|ZP_04074057.1| Histidyl-tRNA synthetase 2 [Bacillus thuringiensis IBL 200]
 gi|228849403|gb|EEM94239.1| Histidyl-tRNA synthetase 2 [Bacillus thuringiensis IBL 200]
          Length = 476

 Score = 67.5 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 76/465 (16%), Positives = 151/465 (32%), Gaps = 64/465 (13%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWK--------IFQTLISY 282
              Y   +   +  +       + L    E+   +     +G +        ++Q +   
Sbjct: 21  HHGYNTLVPTVQTVEAGVFLFLLRLKQFEEEL-NMSIQIPRGTQDILPGTVELWQYIEGQ 79

Query: 283 MRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPM-N 340
            R   +  +Y+EI TP        +          ++   +      +  R+  L+P   
Sbjct: 80  AREICRRYNYKEIRTPIF---EHTELFLRGVGDTTDIVQKEMYSFQDRGERSLTLRPEGT 136

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
            P   +   + +      P +L   G ++R E   +     R R F Q       + +  
Sbjct: 137 APVVRSYVENKMFGDATQPTKLYYIGQMFRYERPQA----GRYRQFVQFGIEAIGSNDPA 192

Query: 401 FNECLKIHNLIISIYKDFGFEKI---MVKLSTRPEKRVGSDALWDDAENIMKG------- 450
            +   ++  L +  Y+  G + I   +  L     ++   DAL    E  +         
Sbjct: 193 IDA--EVIALAVEFYRGMGLKNIKVVLNSLGDAASRQAHRDALIAHFEPRIGEFCSDCQS 250

Query: 451 --------VLDTIKNSSQDRINT-----GVLLGEGAFYGPK-----------FEYILKDA 486
                   +LD  K+ + + + T       L  + A Y  K           FE      
Sbjct: 251 RLEKNPLRILDCKKDRNHELMGTAPSITEYLNEDSAVYYDKVQELLTMMDVPFEKDPNLV 310

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHS--------EKCHPVMIHRAVFGSIERFIGIM 538
            G D+   T+    +    F A    S          E   P M       SIER I  +
Sbjct: 311 RGLDYYQHTVFEIMSEAEGFGAITTLSGGGRYNGLVQEIGGPEMPGIGFAMSIERLIMAL 370

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
            +     LPL    I   V  +   A ++A ++A  L+   LS+E D+ +  +  + +  
Sbjct: 371 -KAENIELPLE-HSIDCYVVALGEKAKDHAAKVAFNLRKAGLSVEKDYLDRKMKAQFKSA 428

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              K   + + G+ E  +  I ++   +   ++V+L      + +
Sbjct: 429 DRLKAKFVAVLGEDELDKGIINLKDMATGEQEEVALDVFASYVAE 473


>gi|166154071|ref|YP_001654189.1| seryl-tRNA synthetase [Chlamydia trachomatis 434/Bu]
 gi|166154946|ref|YP_001653201.1| seryl-tRNA synthetase [Chlamydia trachomatis L2b/UCH-1/proctitis]
 gi|301335275|ref|ZP_07223519.1| seryl-tRNA synthetase [Chlamydia trachomatis L2tet1]
 gi|238687414|sp|B0BAI4|SYS_CHLTB RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|238687427|sp|B0B8V5|SYS_CHLT2 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|165930059|emb|CAP03542.1| seryl-tRNA synthetase [Chlamydia trachomatis 434/Bu]
 gi|165930934|emb|CAP06496.1| seryl-tRNA synthetase [Chlamydia trachomatis L2b/UCH-1/proctitis]
          Length = 428

 Score = 67.5 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 40/249 (16%), Positives = 82/249 (32%), Gaps = 20/249 (8%)

Query: 210 GDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWH 269
            D     + + +G           ++   E  +  D +  A+       A    GV+   
Sbjct: 115 PDKTGNQMIKSHGEVPTFPFPPKHHMQLNEALQILDFKLPAKTTGSGWPAYCNEGVL--- 171

Query: 270 RKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
              W +   L++   ++    ++    P ++ + +   SG    +    + V+  D    
Sbjct: 172 -LEWALLTYLLN---KQQAHGFQLWLPPLLVKRDILFGSGQIPKFDGQYYRVEDGD---- 223

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG---SLHGLMRVRGF 386
             R+  L P          +  + + ++LP+  A F   +R E         GL+RV  F
Sbjct: 224 --RSLFLIPTAEVVLNGFHSQEILNEQDLPLCYAAFTPCFRREAGAGGAHERGLVRVHQF 281

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG----SDALWD 442
            + +   F T EQ      K+ +++  I  +      +  LST              +W 
Sbjct: 282 HKVEMFAFTTPEQEEVVYQKMLHVVEEILSELQLPYQLSLLSTGDMSFTAKKTIDAEVWL 341

Query: 443 DAENIMKGV 451
             +     V
Sbjct: 342 PGQKAFYEV 350


>gi|294506836|ref|YP_003570894.1| Histidyl-tRNA synthetase [Salinibacter ruber M8]
 gi|294343164|emb|CBH23942.1| Histidyl-tRNA synthetase [Salinibacter ruber M8]
          Length = 437

 Score = 67.5 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 61/421 (14%), Positives = 130/421 (30%), Gaps = 65/421 (15%)

Query: 272 GWKI-----FQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQS--GHWDSYRANMFAVKC 323
           G ++     ++ + + +R  ++  ++EEI TP +    L  +      D  +  MFA + 
Sbjct: 26  GTRVAASAEWRHVEATVRDVMRRHNFEEIRTPVLEPTELVARGVGESTDIVQKEMFAFER 85

Query: 324 ADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRV 383
           +D        + L+P      V  F       R    +L   G  +R E         R 
Sbjct: 86  SD------TQYVLRPEITAPVVRSFLQHHLDQRGGVQKLFYIGPCFRAEQPQK----GRY 135

Query: 384 RGFTQDDAHVFCTKEQMFN-ECLKIHNLIIS---------IYKDFGFEKIMVKLSTRPEK 433
           R F Q    V    +   + E + +   +                G  +   +     + 
Sbjct: 136 RQFHQFGIEVLGADQPRADAETIAVLMAVCEALGLSDLRLRLNTLGTPERREEYVAALQD 195

Query: 434 RV--GSDALWDDAENIMKG----VLDTIKNSSQDR-------INTGVLLGEGAFYGPK-- 478
            +   +D L + +   ++     +LDT     Q         I+         +   K  
Sbjct: 196 YLAPHADELSETSRRRLEQNPLRILDTKVEHEQALLRDAPTLIDFVSDESLAHYDEVKGL 255

Query: 479 -----------------FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
                             +Y  +     +      Q       R++       S+   P 
Sbjct: 256 LGDLGVEYDEDPHLVRGLDYYTETTFELEHPGLGAQSALAGGGRYDRLAEVLGSDDPVPA 315

Query: 522 MIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLS 581
           +        +ER    + +  + + P   +P    +  +   A  +    A  L++  L 
Sbjct: 316 V---GFAAGMERLFLAL-DAAEADRPGAATPD-VFIAALGDEAEAWCFRTAQELRAGGLH 370

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           +  D    ++  +++E + +  P  +I G  E    +  ++   S   + V   D +  L
Sbjct: 371 VAHDLMGRSLKAQMKEANRQNAPYAMIIGGNELEAGAATVKEMESGEQEDVPFDDLVEYL 430

Query: 642 T 642
           T
Sbjct: 431 T 431


>gi|262164028|ref|ZP_06031767.1| alanyl-tRNA synthetase [Vibrio mimicus VM223]
 gi|262027556|gb|EEY46222.1| alanyl-tRNA synthetase [Vibrio mimicus VM223]
          Length = 860

 Score = 67.5 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 61/143 (42%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFS 115
             ++ I  E  R+   + HS  H++  A++ +  E     G ++  +   +DF   +  +
Sbjct: 545 DQVDAIVDEQRRAAISLNHSATHLLHAALRKVLGEHVAQKGSLVRAETLRFDFSHLEAMT 604

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           + E+ ++E+ + + I R+       ++ ++A+          K          + V +  
Sbjct: 605 ATEIKEVERLVNQEIRRNHSIETNIMNIDEAKAKGAMALFGEKY--------DDQVRVLS 656

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G++  +LC G H  +TG +  F
Sbjct: 657 MGDFSTELCGGIHASNTGDIGLF 679


>gi|258623803|ref|ZP_05718760.1| alanyl-tRNA synthetase [Vibrio mimicus VM603]
 gi|258583926|gb|EEW08718.1| alanyl-tRNA synthetase [Vibrio mimicus VM603]
          Length = 858

 Score = 67.5 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 61/143 (42%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFS 115
             ++ I  E  R+   + HS  H++  A++ +  E     G ++  +   +DF   +  +
Sbjct: 543 DQVDAIVDEQRRAAISLNHSATHLLHAALRKVLGEHVAQKGSLVRAETLRFDFSHLEAMT 602

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           + E+ ++E+ + + I R+       ++ ++A+          K          + V +  
Sbjct: 603 ATEIKEVERLVNQEIRRNHSIETNIMNIDEAKAKGAMALFGEKY--------DDQVRVLS 654

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G++  +LC G H  +TG +  F
Sbjct: 655 MGDFSTELCGGIHASNTGDIGLF 677


>gi|119953017|ref|YP_945226.1| alanyl-tRNA synthetase [Borrelia turicatae 91E135]
 gi|119861788|gb|AAX17556.1| alanyl-tRNA synthetase [Borrelia turicatae 91E135]
          Length = 593

 Score = 67.5 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 53/130 (40%), Gaps = 10/130 (7%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           H+  H++ +A+Q +  +     G  I  +   +DF      + DE+ ++E  +   I   
Sbjct: 456 HTATHLLHKALQLVLGDHVRQKGSNITAERLRFDFSHPYKMTDDEIKRVEDMVNLQIKNK 515

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTG 192
               +  +S + A           K E        E V++Y    +  ++C GPHV++T 
Sbjct: 516 LSVNRTVMSLDDALAKGAMALFGEKYE--------EIVSVYEIDGFSIEVCGGPHVKNTS 567

Query: 193 QVKKFFKLMK 202
           ++  F    +
Sbjct: 568 ELGIFKIQKE 577


>gi|15827364|ref|NP_301627.1| glycyl-tRNA synthetase [Mycobacterium leprae TN]
 gi|221229841|ref|YP_002503257.1| glycyl-tRNA synthetase [Mycobacterium leprae Br4923]
 gi|13092913|emb|CAC30336.1| putative glycyl-tRNA synthase [Mycobacterium leprae]
 gi|219932948|emb|CAR70921.1| putative glycyl-tRNA synthase [Mycobacterium leprae Br4923]
          Length = 463

 Score = 67.5 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 57/342 (16%), Positives = 114/342 (33%), Gaps = 22/342 (6%)

Query: 307 QSGHWDS-YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAE 364
           + G W      N+           +     L+P    G    F + + +  R+ P  + +
Sbjct: 132 EPGQWTEPREFNLMLKTYLGPIETEEGLHYLRPETAQGIFINFANVVTTARRKPPFGIGQ 191

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
            G  +RNE +   + + R R F Q +   F       +      +  +  Y + G +   
Sbjct: 192 IGKSFRNEITPG-NFIFRTREFEQMEMEFFVEPSTARDWHQYWIDTRMQWYVELGIDPQN 250

Query: 425 VKLSTRPEKRV-GSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           ++L   P+ ++        D E     V +           T   L   A Y    +   
Sbjct: 251 LRLFEHPKDKLSHYSDRTVDIEYKFGFVGNPWGELEGVANRTDFDLSTHARYS-GVDLSF 309

Query: 484 KDAIGRDWQCG-TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
            D +         I+    L   F AF +++++E   P        G  +R +       
Sbjct: 310 YDQVNDTRYTPYVIEPAAGLTRSFMAFLIDAYTEDEAP----NTRGGMDKRAL------- 358

Query: 543 KGNLPLWLSPIQAIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSI 600
              L   L+PI+A V  +         A+++A  L+    + E D     I  + R    
Sbjct: 359 -LRLDPRLAPIKAAVLPLFRHVDLSPKARDLAAELRKC-WNSEFDDAGA-IGRRYRRQDE 415

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
              P  +    +   + ++ +R   + T ++V++ +    L 
Sbjct: 416 VGTPFCVTVDFESLDDNAVTVRERDAMTQERVAMTNVADYLA 457


>gi|229824851|ref|ZP_04450920.1| hypothetical protein GCWU000182_00200 [Abiotrophia defectiva ATCC
           49176]
 gi|229790854|gb|EEP26968.1| hypothetical protein GCWU000182_00200 [Abiotrophia defectiva ATCC
           49176]
          Length = 888

 Score = 67.5 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 67/162 (41%), Gaps = 11/162 (6%)

Query: 45  GKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG- 103
           GKV      + +  + +    + R      HS  H++ +A++ +        G   + G 
Sbjct: 545 GKVIKGMFKIGD-KVTLKVDAENRMATCRNHSATHLLQKALREVLGTHVEQSGSYQDAGR 603

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE 163
             +DF   +  + +E+  +EK + E IA   P   + +S E+A++         K     
Sbjct: 604 TRFDFSHFKAMTPEEIKAVEKLVNEKIAESIPVDTKVMSIEEAKKSGAMALFGEKY---- 659

Query: 164 SIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKFFKLMKVA 204
                + V +   G++  + C G HV++TG + +F  + +  
Sbjct: 660 ----GDEVRVVGMGDFSKEFCGGTHVKNTGMIGQFKIISESG 697


>gi|91217166|ref|ZP_01254128.1| alanyl-tRNA synthetase [Psychroflexus torquis ATCC 700755]
 gi|91184766|gb|EAS71147.1| alanyl-tRNA synthetase [Psychroflexus torquis ATCC 700755]
          Length = 872

 Score = 67.5 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 28/164 (17%), Positives = 63/164 (38%), Gaps = 13/164 (7%)

Query: 44  NGKVCDLSDPVREG---SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII 100
           N ++  ++  + +      + +     R      H+  H++ +A++SI        G ++
Sbjct: 528 NNQIIHITKSLPKDLQKDFKAVVDLSQRQRTASNHTATHLLHQALRSILGTHVEQKGSMV 587

Query: 101 EDGF-YYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLK-QYLSHEKARELFESKKEAYK 158
             G+  +DF      + +EL  IE  +   I  +  F + + + ++ A +         K
Sbjct: 588 HSGYLRFDFSHYSKLTQEELQAIEDFVNARIKENLTFEEERTIPYDVAIDKGAIALFGEK 647

Query: 159 VEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMK 202
                     + V   + G   +LC G HV +T ++  F    +
Sbjct: 648 Y--------GDTVRFVKFGNSKELCGGTHVENTSKLWHFIINNE 683


>gi|317505286|ref|ZP_07963215.1| glycyl-tRNA synthetase beta subunit [Prevotella salivae DSM 15606]
 gi|315663589|gb|EFV03327.1| glycyl-tRNA synthetase beta subunit [Prevotella salivae DSM 15606]
          Length = 530

 Score = 67.5 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 56/348 (16%), Positives = 111/348 (31%), Gaps = 54/348 (15%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+                 L+P    G    + +  K+   +LP  + + G  +RNE  
Sbjct: 207 FNLMFSTEVGSLSDQTNKIYLRPETAQGIFVNYLNVQKTGRMKLPFGICQIGKAFRNEIV 266

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
            +   + R+R F Q +   FC    E  + E  K H L        G E        +  
Sbjct: 267 -ARQFVFRMREFEQMEMQFFCQPGTEMKWFEYWKKHRLAWHKALGMGDENYRFHDHEKLA 325

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
                    + A +I            +  +  G    EG      F+            
Sbjct: 326 HYA------NAATDI------------EFHMPFGFKEVEGIHSRTDFD------------ 355

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK--------- 543
              +        R   ++    +E   P  +  ++ G    F+ ++  ++          
Sbjct: 356 ---LSQHEKFSGRSIKYFDPDKNENYTPYDVETSI-GVDRMFLSVLCHSYTEEQLENGET 411

Query: 544 ---GNLPLWLSPIQAIVTTITSSAV--EYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
                LP  L+P++  V  +       E AQ+I + LK H  +   D ++ +I  + R  
Sbjct: 412 RVVLKLPEALAPVKCAVFPLDKKDGLPELAQQIVDDLKFHFNTHYGDPKD-SIGKRYRRQ 470

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
                P  +        +  + +R   +   ++V + DA+  + +E +
Sbjct: 471 DAVGTPFCVTVDHDTPKDHKVTLRYRDTMKQERVDI-DALRGIMEERV 517


>gi|259046499|ref|ZP_05736900.1| alanine--tRNA ligase [Granulicatella adiacens ATCC 49175]
 gi|259036664|gb|EEW37919.1| alanine--tRNA ligase [Granulicatella adiacens ATCC 49175]
          Length = 914

 Score = 67.5 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 74/195 (37%), Gaps = 21/195 (10%)

Query: 23  GSDVAESISRSLAKKAVAVAI-------NGKVCDLSDPVREGSI----EIITPEDPRSLA 71
           G  +A+  +   A   V   +       NG+     + + +  +     ++     R+  
Sbjct: 540 GGQLADHGTIQDANGTVVANVLQVKKAPNGQPLHTVEVIGDLQVNAAYTLVVDASERAKI 599

Query: 72  VIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDELAQIEKKMQEII 130
           +  H+  H++ +A++ +        G  +   G  +DF      +S+ELA++E+ + E I
Sbjct: 600 IKNHTATHLLHQALKDVLGTHANQAGSLVTPTGLRFDFSHFGQVTSEELAEMERIVNEKI 659

Query: 131 ARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVR 189
                 +    + E A+          K   L        V +   G+W  +LC G HV 
Sbjct: 660 WAGLEVVTVETTLEDAKSRGAMALFGEKYGNL--------VRMVNIGDWSIELCGGIHVA 711

Query: 190 STGQVKKFFKLMKVA 204
           +T ++  F  + +  
Sbjct: 712 NTQEIGLFKIVSESG 726


>gi|254524059|ref|ZP_05136114.1| alanyl-tRNA synthetase [Stenotrophomonas sp. SKA14]
 gi|219721650|gb|EED40175.1| alanyl-tRNA synthetase [Stenotrophomonas sp. SKA14]
          Length = 882

 Score = 67.5 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 35/164 (21%), Positives = 69/164 (42%), Gaps = 16/164 (9%)

Query: 42  AINGKVCDLSDPVREGSIEIIT------PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVA 95
              G+       + EG ++I          + R   ++ HS  H++  A++ +       
Sbjct: 532 KFAGQFHGHVGTLSEGGLKIGDVLSGQVDGERRGATILNHSATHLLHAALREVLGTHVQQ 591

Query: 96  IGP-IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            G  +  D   +DF   QP S++ELA IE+K+ + +  ++      ++ ++A +      
Sbjct: 592 KGSLVAPDRLRFDFSHFQPISAEELAVIERKVNQQVRANNAAEVHTMAMQEALDFGAMAL 651

Query: 155 EAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
              K          E+V + + G++  +LC G HV  TG +  F
Sbjct: 652 FGEKY--------GEHVRVLKMGDYSTELCGGTHVNRTGDIGLF 687


>gi|294505017|ref|YP_003569079.1| alanyl-tRNA synthetase [Yersinia pestis Z176003]
 gi|262363080|gb|ACY59801.1| alanyl-tRNA synthetase [Yersinia pestis D106004]
 gi|262367006|gb|ACY63563.1| alanyl-tRNA synthetase [Yersinia pestis D182038]
 gi|294355476|gb|ADE65817.1| alanyl-tRNA synthetase [Yersinia pestis Z176003]
          Length = 847

 Score = 67.5 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 30/149 (20%), Positives = 62/149 (41%), Gaps = 10/149 (6%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGF-YYDFDKEQPFSS 116
           S+E +     R+   + HS  H++  A++++  E     G ++ D +  +DF   +    
Sbjct: 519 SVEALVDVVRRNRIRLNHSATHLLHAALRNVLGEHVAQKGSLVNDKYLRFDFSHFEAMKP 578

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
           +++  +E  + E I R+ P   + +  + A+E         K          + V +   
Sbjct: 579 EQIRLVEDLVNEQIRRNMPVQTEVMELDAAKEKGAMALFGEKY--------DDQVRVLTM 630

Query: 177 GEW-FDLCRGPHVRSTGQVKKFFKLMKVA 204
           G++  +LC G H   TG +  F  L +  
Sbjct: 631 GDFSTELCGGTHASRTGDIGLFRILTESG 659


>gi|51595175|ref|YP_069366.1| alanyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
 gi|170025588|ref|YP_001722093.1| alanyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
 gi|186894190|ref|YP_001871302.1| alanyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
 gi|59798514|sp|Q66E68|SYA_YERPS RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|205830293|sp|B2K5X9|SYA_YERPB RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|205830296|sp|B1JJA0|SYA_YERPY RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|51588457|emb|CAH20065.1| alanyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
 gi|169752122|gb|ACA69640.1| alanyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
 gi|186697216|gb|ACC87845.1| alanyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
          Length = 875

 Score = 67.5 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 30/149 (20%), Positives = 62/149 (41%), Gaps = 10/149 (6%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGF-YYDFDKEQPFSS 116
           S+E +     R+   + HS  H++  A++++  E     G ++ D +  +DF   +    
Sbjct: 547 SVEALVDVVRRNRIRLNHSATHLLHAALRNVLGEHVAQKGSLVNDKYLRFDFSHFEAMKP 606

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
           +++  +E  + E I R+ P   + +  + A+E         K          + V +   
Sbjct: 607 EQIRLVEDLVNEQIRRNMPVQTEVMELDAAKEKGAMALFGEKY--------DDQVRVLTM 658

Query: 177 GEW-FDLCRGPHVRSTGQVKKFFKLMKVA 204
           G++  +LC G H   TG +  F  L +  
Sbjct: 659 GDFSTELCGGTHASRTGDIGLFRILTESG 687


>gi|153950576|ref|YP_001402195.1| alanyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
 gi|205830292|sp|A7FLR7|SYA_YERP3 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|152962071|gb|ABS49532.1| alanyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
          Length = 875

 Score = 67.5 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 30/149 (20%), Positives = 62/149 (41%), Gaps = 10/149 (6%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGF-YYDFDKEQPFSS 116
           S+E +     R+   + HS  H++  A++++  E     G ++ D +  +DF   +    
Sbjct: 547 SVEALVDVVRRNRIRLNHSATHLLHAALRNVLGEHVAQKGSLVNDKYLRFDFSHFEAMKP 606

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
           +++  +E  + E I R+ P   + +  + A+E         K          + V +   
Sbjct: 607 EQIRLVEDLVNEQIRRNMPVQTEVMELDAAKEKGAMALFGEKY--------DDQVRVLTM 658

Query: 177 GEW-FDLCRGPHVRSTGQVKKFFKLMKVA 204
           G++  +LC G H   TG +  F  L +  
Sbjct: 659 GDFSTELCGGTHASRTGDIGLFRILTESG 687


>gi|22124793|ref|NP_668216.1| alanyl-tRNA synthetase [Yersinia pestis KIM 10]
 gi|45440238|ref|NP_991777.1| alanyl-tRNA synthetase [Yersinia pestis biovar Microtus str. 91001]
 gi|108810954|ref|YP_646721.1| alanyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|145600311|ref|YP_001164387.1| alanyl-tRNA synthetase [Yersinia pestis Pestoides F]
 gi|153997648|ref|ZP_02022748.1| alanyl-tRNA synthetase [Yersinia pestis CA88-4125]
 gi|162420472|ref|YP_001605466.1| alanyl-tRNA synthetase [Yersinia pestis Angola]
 gi|165925794|ref|ZP_02221626.1| alanyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165936759|ref|ZP_02225326.1| alanyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|166010167|ref|ZP_02231065.1| alanyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166213026|ref|ZP_02239061.1| alanyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167398342|ref|ZP_02303866.1| alanyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167421632|ref|ZP_02313385.1| alanyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167423275|ref|ZP_02315028.1| alanyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|167467648|ref|ZP_02332352.1| alanyl-tRNA synthetase [Yersinia pestis FV-1]
 gi|218930326|ref|YP_002348201.1| alanyl-tRNA synthetase [Yersinia pestis CO92]
 gi|229838925|ref|ZP_04459084.1| alanyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229896406|ref|ZP_04511574.1| alanyl-tRNA synthetase [Yersinia pestis Pestoides A]
 gi|229899492|ref|ZP_04514633.1| alanyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229901170|ref|ZP_04516293.1| alanyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|270489353|ref|ZP_06206427.1| alanine--tRNA ligase [Yersinia pestis KIM D27]
 gi|20532253|sp|Q8ZBT8|SYA_YERPE RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|122385127|sp|Q1CLK9|SYA_YERPN RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|205830294|sp|A9R0V7|SYA_YERPG RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|205830295|sp|A4TQ52|SYA_YERPP RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|21957617|gb|AAM84467.1|AE013691_6 alanyl-tRNA synthetase [Yersinia pestis KIM 10]
 gi|45435094|gb|AAS60654.1| alanyl-tRNA synthetase [Yersinia pestis biovar Microtus str. 91001]
 gi|108774602|gb|ABG17121.1| alanyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|115348937|emb|CAL21896.1| alanyl-tRNA synthetase [Yersinia pestis CO92]
 gi|145212007|gb|ABP41414.1| alanyl-tRNA synthetase [Yersinia pestis Pestoides F]
 gi|149289285|gb|EDM39365.1| alanyl-tRNA synthetase [Yersinia pestis CA88-4125]
 gi|162353287|gb|ABX87235.1| alanyl-tRNA synthetase [Yersinia pestis Angola]
 gi|165915408|gb|EDR34018.1| alanyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|165922406|gb|EDR39583.1| alanyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165991074|gb|EDR43375.1| alanyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166205813|gb|EDR50293.1| alanyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166960551|gb|EDR56572.1| alanyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167050846|gb|EDR62254.1| alanyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167057445|gb|EDR67191.1| alanyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|229681895|gb|EEO77988.1| alanyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|229686984|gb|EEO79059.1| alanyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229695291|gb|EEO85338.1| alanyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229700480|gb|EEO88511.1| alanyl-tRNA synthetase [Yersinia pestis Pestoides A]
 gi|270337857|gb|EFA48634.1| alanine--tRNA ligase [Yersinia pestis KIM D27]
 gi|320016499|gb|ADW00071.1| alanyl-tRNA synthetase [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 875

 Score = 67.5 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 30/149 (20%), Positives = 62/149 (41%), Gaps = 10/149 (6%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGF-YYDFDKEQPFSS 116
           S+E +     R+   + HS  H++  A++++  E     G ++ D +  +DF   +    
Sbjct: 547 SVEALVDVVRRNRIRLNHSATHLLHAALRNVLGEHVAQKGSLVNDKYLRFDFSHFEAMKP 606

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
           +++  +E  + E I R+ P   + +  + A+E         K          + V +   
Sbjct: 607 EQIRLVEDLVNEQIRRNMPVQTEVMELDAAKEKGAMALFGEKY--------DDQVRVLTM 658

Query: 177 GEW-FDLCRGPHVRSTGQVKKFFKLMKVA 204
           G++  +LC G H   TG +  F  L +  
Sbjct: 659 GDFSTELCGGTHASRTGDIGLFRILTESG 687


>gi|224372192|ref|YP_002606564.1| alanyl-tRNA synthetase [Nautilia profundicola AmH]
 gi|223588444|gb|ACM92180.1| alanyl-tRNA synthetase [Nautilia profundicola AmH]
          Length = 853

 Score = 67.5 bits (163), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 35/177 (19%), Positives = 79/177 (44%), Gaps = 17/177 (9%)

Query: 37  KAVAVAINGKVCD-------LSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIW 89
           + VA  ++ K  D       +   ++ G   +   ++ RS     H+  H++  A++ + 
Sbjct: 513 RIVAKVVDTKKFDDKNLSKVVEAELKTGDEVVAKVDENRSEIAKNHTATHLLHAALRKVL 572

Query: 90  PEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE 148
            E     G ++E +   +DF   +  + +EL  IE+ +  +IA+  P   + +S ++A++
Sbjct: 573 GEHVTQAGSLVEANRLRFDFTHPKALTKEELESIEEMVNRVIAKSIPAEVKEMSIDEAKK 632

Query: 149 LFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKFFKLMKVA 204
           +        K          + V + + G++  +LC G HV +T +V  F+ + +  
Sbjct: 633 MGAMALFGEKY--------GDVVRVVKFGDFSVELCGGTHVNNTAEVNSFYIIKESG 681


>gi|149202694|ref|ZP_01879666.1| alanyl-tRNA synthetase [Roseovarius sp. TM1035]
 gi|149143976|gb|EDM32010.1| alanyl-tRNA synthetase [Roseovarius sp. TM1035]
          Length = 893

 Score = 67.5 bits (163), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 42/169 (24%), Positives = 75/169 (44%), Gaps = 8/169 (4%)

Query: 36  KKAVAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVI-RHSCAHIMAEAVQSIWPEVQV 94
           KK   V ++  V +  + ++ G    +     R  A+   HS  H++ EA++    E   
Sbjct: 526 KKVAGVFVHIAVVETGE-IKAGQAAQLEVSHARRSAIRANHSATHLLHEALRGALGEHVA 584

Query: 95  AIGP-IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKAREL--FE 151
             G    ED   +DF   +  S+ EL ++E+++ + I +++P   + ++ + AR L    
Sbjct: 585 QRGSLNAEDRLRFDFSHAKALSAAELERVEREVNDYIRQNAPVETRIMAPDDARALGAQA 644

Query: 152 SKKEAYKVEI-LESIPAKENVTLYRQG--EWFDLCRGPHVRSTGQVKKF 197
              E Y  E+ + S+   E       G     +LC G HVR TG +  F
Sbjct: 645 LFGEKYGDEVRVVSMGQAEGSGKGADGRTYSIELCGGTHVRRTGDIGVF 693


>gi|91775482|ref|YP_545238.1| seryl-tRNA synthetase [Methylobacillus flagellatus KT]
 gi|123078899|sp|Q1H290|SYS_METFK RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|91709469|gb|ABE49397.1| seryl-tRNA synthetase [Methylobacillus flagellatus KT]
          Length = 432

 Score = 67.5 bits (163), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 78/220 (35%), Gaps = 12/220 (5%)

Query: 244 RDHRKLAREMDL-FHIAEDGSGVIFWHRKG--WKIFQTLISYMRRKIKD--DYEEINTPQ 298
           +DH  +   + L F      +G  F   +G   ++ + L  +M     +   Y E  TP 
Sbjct: 137 KDHTDIGTPLGLDFDTGAKLAGARFTLMRGQIARLHRALAQFMLDTQTEQHGYTECYTPY 196

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +++    + +G    + A++FA +      +    F L P +           +     L
Sbjct: 197 IVNADSLRGTGQLPKFEADLFAAQKGGQEGESNEAFYLIPTSEVTLTNTVRDEIVPLDSL 256

Query: 359 PVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           P++L      +R+E         G++R   F + +       E+ ++   ++      + 
Sbjct: 257 PIKLTAHTPCFRSEAGSYGRDTRGMIRQHQFDKVEMVQITHPERSYDALEEMVGHAEHVL 316

Query: 416 KDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
           +  G    +V L T              +W  A+N  + +
Sbjct: 317 QALGLPYRVVLLCTGDMGFGAAKTYDLEVWLPAQNTYREI 356


>gi|312136460|ref|YP_004003797.1| glycyl-tRNA synthetase [Methanothermus fervidus DSM 2088]
 gi|311224179|gb|ADP77035.1| glycyl-tRNA synthetase [Methanothermus fervidus DSM 2088]
          Length = 591

 Score = 67.5 bits (163), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 57/288 (19%), Positives = 95/288 (32%), Gaps = 69/288 (23%)

Query: 256 FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDS 313
           F I E  SG   +   G  + + +I   R     K+ + E+ TP V+ + + + SGH D 
Sbjct: 27  FEIYEGLSGFYDYGPLGVLLKRKIIEKWREYYTIKEGFYEVETPNVMPKEVLKASGHVDH 86

Query: 314 YRANMFAVKCA-----------DDTIKDLRTF---------------------------- 334
           +   M   K             D+T +D+                               
Sbjct: 87  FNDPMTKCKDCSEIYRADHLIKDETGEDVEGLSNEKLTEIISKKKIRCPKCGGHLSHVWS 146

Query: 335 -----------------ALKPMNCPGHVAVFNHGLKSYRE-LPVRLAEFGSVYRNEPSGS 376
                             L+P    G   +F   ++ YR  LP  + + G  +RNE S  
Sbjct: 147 YNLMFQTLIGPTGKKVGYLRPETAQGIFVLFKRLMRFYRNKLPFGVVQIGKSFRNEISPR 206

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF-------GFEKIMVKLST 429
             G++R+R FTQ +A +F   +   +   K H +     K F       G +   + L  
Sbjct: 207 -QGVIRLREFTQAEAEIFVEPDNKTHP--KFHKVADEKLKLFSAEKQLNGEKPEKISLKE 263

Query: 430 RPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
             ++ + S  L      + K  L  +    +       L  E A Y  
Sbjct: 264 AVDENIISSELLAYHLYLTKEFLTDLGIPEEMIRFRQHLPSEMAHYAA 311



 Score = 55.9 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/141 (21%), Positives = 48/141 (34%), Gaps = 14/141 (9%)

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIENFKGN-------LPLWLSPIQAIVTT--ITSSAV 565
            +K  P +I    FG    F   MI NF  +        P  ++PI   V         +
Sbjct: 435 GKKVLPHVIE-PSFGIDRIFYATMIHNFVEDDERTYFDFPTDIAPIPVAVFPLLNKKELI 493

Query: 566 EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
             A +I   L+   L +  D    TI  +        IP  I    +   + ++ IR   
Sbjct: 494 NLAIKIKKDLQKEGLIVNYDESG-TIGRRYARADEIGIPFAITVDHQSIEDGTVTIRNRS 552

Query: 626 STTTQKVSLL---DAIPILTK 643
                ++++    D I  L K
Sbjct: 553 DKKQVRIAINKIPDTIKKLIK 573


>gi|138893692|ref|YP_001124145.1| seryl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
 gi|166222728|sp|A4IJ96|SYS_GEOTN RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|134265205|gb|ABO65400.1| Seryl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
          Length = 424

 Score = 67.5 bits (163), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 51/352 (14%), Positives = 114/352 (32%), Gaps = 45/352 (12%)

Query: 109 DKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK 168
           DKE+     ++ +++ K  E+  + +   ++    E          +  K          
Sbjct: 35  DKERRRLIAQVEELKSKRNEVSQQIAVLKREKKDAESLIAEMREVGDRIKQ-------MD 87

Query: 169 ENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQ 228
           E +    +     L   P+V          +   V    W             G   +  
Sbjct: 88  EQIRQLEEELDSLLLSIPNVPHESVPVGQSEEDNVEVRRW-------------GEPRSFS 134

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK 288
            E   +    ++    D  + A+           S  +F+   G ++ + LI++M     
Sbjct: 135 FEPKPHWDIADQLGLLDFERAAKVAG--------SRFVFYKGLGARLERALINFMLDIHL 186

Query: 289 D--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA 346
           D   Y+E+  P ++++     +G    +  + F +        D   + L P        
Sbjct: 187 DEFGYQEVLPPYLVNRASMIGTGQLPKFAEDAFHL--------DNEDYFLIPTAEVPVTN 238

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNE 403
           +    + +  +LP+  A + + +R E   +     GL+R   F + +   F   E  ++E
Sbjct: 239 LHRDEILTADDLPLYYAAYSACFRAEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYDE 298

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
             K+ +   +I +  G    +V L T              +W  +    + +
Sbjct: 299 LEKLTHQAETILQRLGLPYRVVALCTGDLGFSAAKTYDIEVWLPSYGTYREI 350


>gi|110679927|ref|YP_682934.1| alanyl-tRNA synthetase [Roseobacter denitrificans OCh 114]
 gi|123065511|sp|Q165U5|SYA_ROSDO RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|109456043|gb|ABG32248.1| alanyl-tRNA synthetase [Roseobacter denitrificans OCh 114]
          Length = 885

 Score = 67.5 bits (163), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 42/140 (30%), Positives = 66/140 (47%), Gaps = 8/140 (5%)

Query: 66  DPRSLAVIR--HSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDELAQI 122
           DP     IR  HS  H++ EA++    +     G    ED   +DF   Q  S +ELA++
Sbjct: 551 DPARRTAIRANHSATHLLHEALREALGDHVAQRGSLNAEDRLRFDFSHTQALSHEELARV 610

Query: 123 EKKMQEIIARDSPFLKQYLSHEKAREL--FESKKEAYKVEI-LESIPAKENVTLYRQGEW 179
           E  +   I +++P   + ++ + AREL       E Y  E+ + S+  KE       G+ 
Sbjct: 611 EADVNAYIRQNAPVETRIMTPDAARELGAQALFGEKYGDEVRVVSMGRKEGSGKGLSGDT 670

Query: 180 F--DLCRGPHVRSTGQVKKF 197
           +  +LC G HVR TG +  F
Sbjct: 671 YSLELCGGTHVRQTGDIGAF 690


>gi|227892467|ref|ZP_04010272.1| seryl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
 gi|227865760|gb|EEJ73181.1| seryl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
 gi|300214095|gb|ADJ78511.1| Seryl-tRNA synthetase (Seryl-tRNA(Ser/Sec) synthetase)
           (Serine--tRNA ligase) (SerRS) [Lactobacillus salivarius
           CECT 5713]
          Length = 425

 Score = 67.1 bits (162), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 52/348 (14%), Positives = 111/348 (31%), Gaps = 30/348 (8%)

Query: 112 QPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENV 171
           +P   DEL   +KK +E++       K+     +A    +  KE    +I         +
Sbjct: 24  KPEEIDELVAEDKKRRELLVETENLKKERNEVSEAIAQAKRNKEDASEQIQAMRKVGTKI 83

Query: 172 TLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQEL 231
                    D        +   +      +         D +  +     GT      E 
Sbjct: 84  KE------LDEKLAKVEENVKSMAAHLPNLPNPTIPVGPDEDSNVELYKVGTPRKFDFEP 137

Query: 232 TQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDD 290
             +    E+    D  + A+      +        F+   G K+ + + ++M     K+ 
Sbjct: 138 KAHWDIGEDLGILDFDRAAKVSGARFV--------FYKGLGAKLERAVYNFMLDEHAKEG 189

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH 350
           Y E+  P ++       +G +  ++  ++ V        +     L P         +  
Sbjct: 190 YTEVIPPYIVKAKSMYGTGQFPKFKDQVYQV--------NGEDMTLIPTAEVPLTNYYRE 241

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
            +    +LPV        +R+E   +     GL+R+  F + +   +   E  +NE  K+
Sbjct: 242 EVIPTEDLPVYFTALSPSFRSEAGSAGRDTRGLIRMHQFNKVEMVKYTKPEDSYNELEKM 301

Query: 408 HNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
                +I +  G    ++ LST              +W  A++  + +
Sbjct: 302 TKNAGNIMEKLGLPYHVITLSTGDMGFSAAMTHDLEVWMPAQDTYREI 349


>gi|138896141|ref|YP_001126594.1| histidyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
 gi|166227970|sp|A4IR95|SYH_GEOTN RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|134267654|gb|ABO67849.1| Histidyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
          Length = 426

 Score = 67.1 bits (162), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 70/421 (16%), Positives = 125/421 (29%), Gaps = 55/421 (13%)

Query: 269 HRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
                + +Q +    R   +   YEEI TP        +          ++   +     
Sbjct: 13  LPGETEKWQYVEQVARDLCRRYGYEEIRTPIF---EHTELFLRGVGDTTDIVQKEMYTFE 69

Query: 328 IKDLRTFALKPM-NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
            K  R   L+P    P   A   H L      PV+L   G ++R E   +     R R F
Sbjct: 70  DKGGRALTLRPEGTAPVVRAFVEHKLYGSPNQPVKLYYAGPMFRYERPEA----GRFRQF 125

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM-----------VKLSTRPEKRV 435
            Q       + +   +   ++  L + IYK  G + I             +       R 
Sbjct: 126 VQFGVEAIGSSDPAIDA--EVMALAMHIYKALGLKHIRLVINSLGDVDSRRAHREALVRH 183

Query: 436 GSDALWD-------DAENIMKGVLD-------TIKNSSQDRINTGVLLGEGAF-----YG 476
            SD + +         E     +LD        +  S+   ++         F     Y 
Sbjct: 184 FSDRIHELCPDCQARLETNPLRILDCKKDRDHELMASAPSILDYLNDESSAYFEKVKQYL 243

Query: 477 PKFEYIL----KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS--------EKCHPVMIH 524
              +       +   G D+   T     +    F A               E   P    
Sbjct: 244 TMLDIPFVIDSRLVRGLDYYNHTTFEIMSEAEGFGAAATLCGGGRYNGLVQEIGGPETPG 303

Query: 525 RAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIET 584
                SIER +  + E     LP+    I   V  +   A +    +   L+   L +E 
Sbjct: 304 IGFALSIERLLAAL-EAEGIELPIHRG-IDCYVVAVGERAKDETVRLVYELRRAGLRVEQ 361

Query: 585 DFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           D+    +  +++         + I GD+E  +++  ++   S     V L +    L + 
Sbjct: 362 DYLGRKMKAQLKAADRLGASFVAIIGDEELEKQTAAVKHMASGEQTDVPLGELASFLIER 421

Query: 645 S 645
           +
Sbjct: 422 T 422


>gi|86607115|ref|YP_475878.1| histidyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
 gi|123724539|sp|Q2JRX6|SYH_SYNJA RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|86555657|gb|ABD00615.1| histidyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
          Length = 419

 Score = 67.1 bits (162), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 69/418 (16%), Positives = 145/418 (34%), Gaps = 53/418 (12%)

Query: 269 HRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQS--GHWDSYRANMFAVKCAD 325
             +  +++Q + +  R  + + +Y+EI TP +    L+ +S     D     M++     
Sbjct: 14  LPQEVRLWQQVEASAREILGRANYQEIRTPILELTELFARSIGSATDVVGKEMYSF---- 69

Query: 326 DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRG 385
            + +  +  +L+P N  G V  +            RL   G ++R E   +     R R 
Sbjct: 70  -STRGEQEVSLRPENTAGVVRAYIQHGLQVAGDVQRLWYCGPMFRYERPQA----GRQRQ 124

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKL---STRPEKRVGSDALWD 442
           F Q    +  +++   +   ++  L   + +  G E + ++L       ++R    AL D
Sbjct: 125 FHQLGVELLGSRDPRADA--EVIALAWDLLRAVGAENLTLRLNSLGDPQDRRAYRQALVD 182

Query: 443 DAENIMKGVLDTIKNSSQDRINTGVLLGEG------AFYGPKF-EYILKDAIGRDWQCGT 495
                +K  LD        R    +L  +       A  GPK  +Y+  D+     Q   
Sbjct: 183 YLTP-LKEELDLDSQERLVRNPLRILDSKDPHTRTIAEQGPKLPDYLSADSRAFFEQVQA 241

Query: 496 IQVDFNLPSRFN-------AFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPL 548
                ++P   +        +Y ++  E   P +  ++      R+ G++ E      P 
Sbjct: 242 HLQALDIPYELDPYLVRGLDYYTHTAFEIVSPELGSQSTVCGGGRYDGLVEELGGPPTPA 301

Query: 549 --W-------------------LSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR 587
             W                    + ++  V +  + A   + +IA  L+      E D  
Sbjct: 302 VGWAIGLERLVLLLQKKQQEIPPTSVEVYVISRGAKAEAQSLQIAQALRQAGFCTELDLS 361

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
               + + +  S       +  GD EA+   + ++   +   Q +   D +  L  + 
Sbjct: 362 GSAFSKQFKRASRSGATWAVALGDAEAAAGEVQLKHLPTGQQQTLLQADLVKYLVSQR 419


>gi|260587849|ref|ZP_05853762.1| alanine--tRNA ligase [Blautia hansenii DSM 20583]
 gi|260542114|gb|EEX22683.1| alanine--tRNA ligase [Blautia hansenii DSM 20583]
          Length = 892

 Score = 67.1 bits (162), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 30/133 (22%), Positives = 61/133 (45%), Gaps = 10/133 (7%)

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIAR 132
            HS  H++ +A++++        G  +  D   +DF   Q  +++ELA +E+ + + I  
Sbjct: 578 NHSATHLLQKALKTVLGSHVEQKGSLVTPDRLRFDFAHFQSMTAEELAAVEEIVNKEIQA 637

Query: 133 DSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRST 191
             P + + +S E+A+++        K          E V +   G++  +LC G HV +T
Sbjct: 638 ALPVVTEVMSIEEAKKVGAMALFGEKY--------GEEVRVVSMGDFSKELCGGTHVSNT 689

Query: 192 GQVKKFFKLMKVA 204
           G +  F  + +  
Sbjct: 690 GVITTFKIISESG 702


>gi|229175078|ref|ZP_04302595.1| Histidyl-tRNA synthetase 2 [Bacillus cereus MM3]
 gi|228608374|gb|EEK65679.1| Histidyl-tRNA synthetase 2 [Bacillus cereus MM3]
          Length = 476

 Score = 67.1 bits (162), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 71/419 (16%), Positives = 140/419 (33%), Gaps = 55/419 (13%)

Query: 269 HRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
                +++Q +    R   +  +Y+EI TP        +          ++   +     
Sbjct: 66  LPGSVELWQYIEGQAREICRRYNYKEIRTPIF---EHTELFLRGVGDTTDIVQKEMYSFQ 122

Query: 328 IKDLRTFALKPM-NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
            +  R+  L+P    P   +   + +      P +L   G ++R E   +     R R F
Sbjct: 123 DRGERSLTLRPEGTAPVVRSYVENKMFGDATQPTKLYYIGQMFRYERPQA----GRYRQF 178

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI---MVKLSTRPEKRVGSDALWDD 443
            Q       + +   +   ++  L +  Y+  G + I   +  L     ++   DAL   
Sbjct: 179 VQFGIEAIGSNDPAIDA--EVIALAVEFYRGMGLKNIKVVLNSLGDAASRQAHRDALIAH 236

Query: 444 AENIMKG---------------VLDTIKNSSQDRINT-----GVLLGEGAFYGPK----- 478
            E  +                 +LD  K+ + + + T       L  + A Y  K     
Sbjct: 237 FEPRIGEFCSDCQSRLEKNPLRILDCKKDRNHELMGTAPSITEYLNEDSAVYYDKVQELL 296

Query: 479 ------FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS--------EKCHPVMIH 524
                 FE       G D+   T+    +    F A    S          E   P M  
Sbjct: 297 TMMDVPFEKDPNLVRGLDYYQHTVFEIMSEAEGFGAITTLSGGGRYNGLVQEIGGPEMPG 356

Query: 525 RAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIET 584
                SIER I  + +     LP+    I   V  +   A ++A ++A  L+   LS+E 
Sbjct: 357 IGFAMSIERLIMAL-KAENIELPIE-HSIDCYVVALGEKAKDHAAKVAFDLRKAGLSVEK 414

Query: 585 DFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           D+ +  +  + +     K   + + G+ E  +  I ++   +   ++V+L      + +
Sbjct: 415 DYLDRKMKAQFKSADRLKAKFVAVLGEDELDKGIINLKDMATGEQEEVALDVFASYVAE 473


>gi|147921639|ref|YP_684544.1| seryl-tRNA synthetase [uncultured methanogenic archaeon RC-I]
 gi|121677008|sp|Q0W8S5|SYS_UNCMA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|110619940|emb|CAJ35218.1| seryl-tRNA synthetase [uncultured methanogenic archaeon RC-I]
          Length = 425

 Score = 67.1 bits (162), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 46/244 (18%), Positives = 91/244 (37%), Gaps = 21/244 (8%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGWKIF-- 276
           G       E+ ++   +++  E ++H  LA E     F  A   +G  F+  KG  +   
Sbjct: 117 GKDDTENVEVKRWGEPVQKDFEIKNHGLLAVEHGWADFERAAKVAGAGFYFLKGNMVLLD 176

Query: 277 QTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFA 335
             L  + M   +K  +  +  P ++++  ++       +   M+ +        +     
Sbjct: 177 MALQRFAMDLLVKRGFTPVTPPYMMNRKSYEGVTDLADFEKVMYKI--------EGDDMY 228

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAH 392
           L   +     A++   +   ++LP+RLA     +R E         GL RV  F + +  
Sbjct: 229 LIATSEHPIGAMYQGEIFEEKDLPLRLAGISPCFRREIGAHGLDTKGLFRVHQFHKIEQF 288

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENIM 448
           VFC  E  +    +I     ++++  G    +V + T     V        +W   EN  
Sbjct: 289 VFCKPEDSWKIHEEILANAEAVFQQLGLPYHVVNICTGDIGTVAAKKYDIEVWMPRENTY 348

Query: 449 KGVL 452
           K V+
Sbjct: 349 KEVV 352


>gi|82749786|ref|YP_415527.1| seryl-tRNA synthetase [Staphylococcus aureus RF122]
 gi|123548272|sp|Q2YUR2|SYS_STAAB RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|82655317|emb|CAI79697.1| seryl-tRNA synthetase [Staphylococcus aureus RF122]
          Length = 428

 Score = 67.1 bits (162), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 52/357 (14%), Positives = 123/357 (34%), Gaps = 35/357 (9%)

Query: 106 YDFDKEQPFSSDELAQIEKKMQEII--ARDSPFLKQYLSHEKARELFESKKEAYKVEILE 163
            +   + P   DE+ +++++ +++I    +    +  +S E A +    + +   +  + 
Sbjct: 18  IELRGDDPKVVDEILELDEQRRKLIIATEEMKARRNKVSEEIALKKRNKENDDDVIAEMR 77

Query: 164 SIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
           ++         +  E  D         TG + +   L+         D +   + + +GT
Sbjct: 78  TLGDDIKEKDSQLNE-IDNKM------TGILCRIPNLISDDVPQGESDEDNVEVKK-WGT 129

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYM 283
                 E   +   +EE +  D  + A+      +             G ++ + L++YM
Sbjct: 130 PREFSFEPKAHWDIVEELKMADFDRAAKVSGARFVYLTNE--------GAQLERALMNYM 181

Query: 284 RRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
             K   +  Y E+  PQ+++      +G    +  ++F V        +       P   
Sbjct: 182 ITKHTTQHGYTEMMVPQLVNADTMYGTGQLPKFEEDLFKV--------EKEGLYTIPTAE 233

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKE 398
                 + + +     LP +     + +R+E   +     GL+R+  F + +   F   E
Sbjct: 234 VPLTNFYRNEIIQPGVLPEKFTGQSACFRSEAGSAGRDTRGLIRLHQFDKVEMVRFEQPE 293

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
             +N   ++     +I ++ G     V L T              +W  + N  K +
Sbjct: 294 DSWNALEEMTTNAEAILEELGLPYRRVILCTGDIGFSASKTYDLEVWLPSYNDYKEI 350


>gi|73662437|ref|YP_301218.1| histidyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|83305879|sp|Q49Y69|SYH_STAS1 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|72494952|dbj|BAE18273.1| histidyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 420

 Score = 67.1 bits (162), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 70/432 (16%), Positives = 146/432 (33%), Gaps = 80/432 (18%)

Query: 269 HRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQS--GHWDSYRANMFAVKCAD 325
                K ++ + + +   ++  +Y+EI TP      L+ +      D  +  M+  K   
Sbjct: 12  LPNETKKWRFIEARLDELMEVYNYQEIRTPIFESTELFARGVGDSTDVVQKEMYTFKDKG 71

Query: 326 DTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL----PVRLAEFGSVYRNEPSGSLHGLM 381
           D     R+  L+P    G  AV    +++  +     P++L   G ++R E         
Sbjct: 72  D-----RSITLRP---EGTAAVVRSYIENKMQGLPNQPIKLYYNGPMFRYERKQK----G 119

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG-------------------FEK 422
           R R FTQ        +    +   ++  + + IY+ FG                   + +
Sbjct: 120 RYRQFTQFGVEAIGAENPGVDA--EVLAMAMHIYQSFGLKHLKLVINSIGDIDSRHEYNE 177

Query: 423 IMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD------RINTGVLLGEGAFYG 476
            +VK          SD       N M+ +LD   +  ++      RI   +      +Y 
Sbjct: 178 ALVKHFEPVIGDFCSDCQSRLHTNPMR-ILDCKIDKDKEAVKTAPRITEFLNETSKQYYA 236

Query: 477 PKFEY-ILKDAIGR---DWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI--------- 523
              +     D +G    +       +D+   + F     N + +     +          
Sbjct: 237 ---DVKQHLDDLGVPYVEDPNLVRGLDYYTHTAFELMIDNPNYDGAITTLCGGGRYNGLL 293

Query: 524 ------HRAVFG---SIERFIGIMIENFKGNLPLWLSPIQ---AIVTTITSSAVEYAQEI 571
                 H+   G   SIER +  + E       + L         + T+   A  YA ++
Sbjct: 294 ELLDGPHQTGIGFALSIERLLLALDEEN-----IELDTEHDFDLFIVTMGEEADRYAVKL 348

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
            N L+ + +  + D+    +  ++++         I+ G++E  E  I ++   +  ++ 
Sbjct: 349 LNDLRRNGVKADKDYLQRKVKGQMKQADRLNANYTIVIGEQELQENKINVKNMQTGESES 408

Query: 632 VSLLDAIPILTK 643
           V L   +    K
Sbjct: 409 VDLDKLVNYFKK 420


>gi|315612039|ref|ZP_07886956.1| histidine--tRNA ligase [Streptococcus sanguinis ATCC 49296]
 gi|315315841|gb|EFU63876.1| histidine--tRNA ligase [Streptococcus sanguinis ATCC 49296]
          Length = 426

 Score = 67.1 bits (162), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 61/404 (15%), Positives = 128/404 (31%), Gaps = 56/404 (13%)

Query: 276 FQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           +Q +  + R   K  +Y E+ TP       ++          ++   +  D   K  R  
Sbjct: 20  WQYVEGFAREIFKRYNYAEVRTPIF---EHYEVISRSVGDTTDIVTKEMYDFYDKGDRHI 76

Query: 335 ALKPMNCPGHVAVFNHGLKS-----YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
            L+P    G   V    +++       + P +    G ++R E   +     R+R F Q 
Sbjct: 77  TLRP---EGTAPVVRSYVENKLFAPEVQKPSKFYYMGPMFRYERPQA----GRLRQFHQI 129

Query: 390 DAHVFCTKEQM-FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWD------ 442
               F +       E + +    +      G +  +  L     +     AL D      
Sbjct: 130 GVECFGSSNPATDVETIAMAAHFLKEIGIKGVKLHLNTLGNPESRAAYRQALIDYLTPLK 189

Query: 443 -----DAENIMKG----VLDTIKNSSQDR-------INTGVLLGEGAFYGPK-------F 479
                D++  ++     VLD+ +   ++        ++      +  F   +        
Sbjct: 190 ETLSKDSQRRLEENPLRVLDSKEKEDKEAVENAPSILDFLDEESQAHFDAVRQMLENLGV 249

Query: 480 EYILKDAI--GRDWQCGTIQVDFNLPSRFNAFYVN---SHSEKCHPVMIHRAVFG---SI 531
           +YI+   +  G D+   TI          +              +      A FG    +
Sbjct: 250 DYIIDTNMVRGLDYYNHTIFEFITEIEGNDLTVCAGGRYDGLVAYFGGPETAGFGFGLGV 309

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           ER + I+    +G      + +   +  +   A   A E+   L+      E D+ N  +
Sbjct: 310 ERLLLIL--EKQGVALPIENALDVYIAVLGEGANVKALELVQALRQQGFKAERDYLNRKL 367

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
             + +   +    I+I  G+ E     + ++   +    +VSL 
Sbjct: 368 KAQFKSADVFAAKILITLGESEVESGQVTVKNNQTREEVQVSLD 411


>gi|260101665|ref|ZP_05751902.1| histidine-tRNA ligase [Lactobacillus helveticus DSM 20075]
 gi|260084525|gb|EEW68645.1| histidine-tRNA ligase [Lactobacillus helveticus DSM 20075]
          Length = 428

 Score = 67.1 bits (162), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 70/424 (16%), Positives = 132/424 (31%), Gaps = 73/424 (17%)

Query: 276 FQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           +Q +    R      +Y EI TP       ++         + +   +  D   K  R  
Sbjct: 20  WQKVEETARNFFNRANYREIRTP---SFENYEIFSRSSGDSSEIVEKQMYDFNDKGGRHI 76

Query: 335 ALKPMNCPGHVAVF--NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
           AL+P    G V  +  +         P  +    S +R E   +     R R F Q    
Sbjct: 77  ALRPEGTAGVVRAYVEDKMYAPEVVKPFNVFYMESTFRYERPQA----GRQREFHQIGVE 132

Query: 393 VFCT---------------------------------KEQMFNECLKIHNLIISIYKDFG 419
            F +                                  EQ+            +  KD  
Sbjct: 133 SFGSSNPLADVQTIMMGHDLLGELGVKNYQLHINTLGDEQVRKGYHDALVNYFTPVKDKL 192

Query: 420 FEKIMVKLSTRPEKRVGS----------------DALWDDAENIMKGVLDTIKNSSQDR- 462
            E    +L   P + + S                D L D+++   + +L  +     D  
Sbjct: 193 SEDSQRRLRDNPLRILDSKDDRDKKFLPDAPKIRDFLDDNSKANFESILKMLDQLGIDYV 252

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
           I+  ++ G   + G  FE++++D    +     +        R++      +  +   V 
Sbjct: 253 IDDDLVRGLDYYTGVIFEFMVEDKSLWESATTILGGG-----RYDHLVEEFNGPETPAV- 306

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSI 582
                FG  E  + +++E     L      I   +T I     + A EI   L+      
Sbjct: 307 ----GFGIGEERLMLVLEKQNPEL-FKNEGIDFFITNIGEGTAQKAIEIVRSLRKQGFEA 361

Query: 583 ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA--IPI 640
           + D   + +  + ++   +    +I  G+KE +   + I+R     T  +SL D   +  
Sbjct: 362 DFDVNQKKLKGQFKKADREGAKYVITLGEKELANGVLNIKRLADGKTIDLSLEDINDMNK 421

Query: 641 LTKE 644
           + KE
Sbjct: 422 VMKE 425


>gi|313206450|ref|YP_004045627.1| seryl-tRNA synthetase [Riemerella anatipestifer DSM 15868]
 gi|312445766|gb|ADQ82121.1| seryl-tRNA synthetase [Riemerella anatipestifer DSM 15868]
 gi|315023609|gb|EFT36613.1| seryl-tRNA synthetase [Riemerella anatipestifer RA-YM]
 gi|325336105|gb|ADZ12379.1| Seryl-tRNA synthetase [Riemerella anatipestifer RA-GD]
          Length = 422

 Score = 67.1 bits (162), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 40/260 (15%), Positives = 88/260 (33%), Gaps = 20/260 (7%)

Query: 199 KLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI 258
           K   +    ++  +    + +   +A + +        F   +E   H +LA++ +L   
Sbjct: 96  KEESLLNILYQIPNIPADIVKAGSSADDNEVVYQSCDTFEMGTEALPHWELAKKYNLIDF 155

Query: 259 A----EDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDS 313
                  G+G   +  KG ++ + L+ + + +     Y E+N P V+++           
Sbjct: 156 ELGVKIAGAGFPVYLGKGARLQRALVQFFLDKNTDAGYLEVNPPHVVNE--------ASG 207

Query: 314 YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP 373
           Y       K       +     L P        ++   +   ++LPV+   F   YR E 
Sbjct: 208 YGTGQLPDKEGQMYFVNEDNLYLIPTAEVPVTNIYRDVILEEKKLPVKNTAFSQCYRREA 267

Query: 374 SG---SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR 430
                 + GL R+  F + +       E  +    ++   + SI +D      +++L   
Sbjct: 268 GSYGADVRGLNRLHQFEKVEIVRLEKPENSYTALDEMVAHVKSILEDLELPFRILRLCGG 327

Query: 431 PEKR----VGSDALWDDAEN 446
                        +W  A+ 
Sbjct: 328 DMGFTSALTYDFEVWSAAQQ 347


>gi|237746814|ref|ZP_04577294.1| seryl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
 gi|229378165|gb|EEO28256.1| seryl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
          Length = 438

 Score = 67.1 bits (162), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 80/222 (36%), Gaps = 13/222 (5%)

Query: 242 EKRDHRKLAREMDL-FHIAEDGSGVIF--WHRKGWKIFQTLISYM--RRKIKDDYEEINT 296
           E +DH  +   + L F  A   +G  F        ++ + L  +M   + ++  Y E  T
Sbjct: 135 EVKDHVDIGVPLGLDFETAGKLAGARFCVMRGNMARLHRALAQFMLDVQTMEHGYTECYT 194

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +++      +G    +  ++FA K      ++   + + P             + S  
Sbjct: 195 PYMVNADSLYGTGQLPKFADDLFAAKKGGQEGENENLYLI-PTAEVTLTNTVRGEILSSG 253

Query: 357 ELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           +LP++L      +R+E         G++R   F + +       E+ +    ++      
Sbjct: 254 QLPIKLTAHTPCFRSEAGSYGRDTRGMIRQHQFDKVEMVQIVHPEKSYEALEEMVKNAGR 313

Query: 414 IYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
           + +  G    +V LST              +W  A+N  + +
Sbjct: 314 VLEKLGLPYRVVSLSTGDMGFSAAKTYDLEVWLPAQNTYREI 355


>gi|189466841|ref|ZP_03015626.1| hypothetical protein BACINT_03217 [Bacteroides intestinalis DSM
           17393]
 gi|189435105|gb|EDV04090.1| hypothetical protein BACINT_03217 [Bacteroides intestinalis DSM
           17393]
          Length = 454

 Score = 67.1 bits (162), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 67/202 (33%), Gaps = 15/202 (7%)

Query: 442 DDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFN 501
           +++E I+K  L      ++  ++  +  G   + G  FE    D        G      N
Sbjct: 268 EESEFILKT-LSVFGLKNELELDLTLARGLNYYTGAIFEVKALDVQIGSITGGGR--YDN 324

Query: 502 LPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT 561
           L   F    V+              +    +R   ++           ++  Q +     
Sbjct: 325 LTGVFGMAGVSGVG-----------ISFGADRIFDVL-NQLDLYPKEAVNSTQLLFINFG 372

Query: 562 SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
                Y+  I   +++  +  E    +  +  ++   + K IP + + G+ E +E  + +
Sbjct: 373 EKEAAYSLNILAKVRAEGIRAEIFPDSSKMKKQMSYANAKNIPFVALVGENEMNENKVTL 432

Query: 622 RRFGSTTTQKVSLLDAIPILTK 643
           +   +     VS  + I  L K
Sbjct: 433 KNMETGEQSLVSAEELIQTLKK 454


>gi|225570650|ref|ZP_03779673.1| hypothetical protein CLOHYLEM_06750 [Clostridium hylemonae DSM
           15053]
 gi|225160477|gb|EEG73096.1| hypothetical protein CLOHYLEM_06750 [Clostridium hylemonae DSM
           15053]
          Length = 879

 Score = 67.1 bits (162), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 62/143 (43%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFS 115
            ++ +   E+ R+L+   HS  H++ +A++++        G  +  +   +DF      +
Sbjct: 548 DTVTLEVDEENRALSARNHSATHLLHKALRTVLGTHVEQAGSSVNAERLRFDFTHFSALT 607

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            +EL ++E+ +   I    P   + L  E+AR+   +     K          + V +  
Sbjct: 608 KEELKKVEEIVNAQIMAALPVKVENLPIEEARKTGAAALFGEKY--------GDIVRVVS 659

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G++  + C G HV +TG +  F
Sbjct: 660 MGDFSVEFCGGTHVENTGVITAF 682


>gi|189345581|ref|YP_001942110.1| glycyl-tRNA synthetase [Chlorobium limicola DSM 245]
 gi|189339728|gb|ACD89131.1| glycyl-tRNA synthetase [Chlorobium limicola DSM 245]
          Length = 489

 Score = 67.1 bits (162), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 48/351 (13%), Positives = 107/351 (30%), Gaps = 51/351 (14%)

Query: 308 SGHWDSYRANMFAVKCADDTIKDLRTFAL-KPMNCPGHVAVFNH-GLKSYRELPVRLAEF 365
           SG W   R      +C    + D       +P    G    F++    S  ++P  +A+ 
Sbjct: 170 SGDWTEVRQFNLMFQCNMGAVADTSGIVYLRPETAQGIFVNFHNVREASRMKVPFGIAQI 229

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY-KDFGFEKIM 424
           G  +RNE     + + R+  F Q +   F                  + Y  + G  +  
Sbjct: 230 GKAFRNEIVKG-NFIFRMVEFEQMEMQYFVKPGSQIEAFEAWREERFNWYVTELGITQEK 288

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +      +    +D  +D                 +     G    EG      F+    
Sbjct: 289 LHWYKHDKLAHYADLAYDI----------------KFEFPFGTEEIEGIHSRTDFD---- 328

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF-- 542
                      +        +   +   + +E+  P ++  +  G    F+ ++ + +  
Sbjct: 329 -----------LSQHQQYSGKNMEYIDQTTNERYIPYVVETSS-GCDRLFLALLSDAYNE 376

Query: 543 ---------KGNLPLWLSPIQAIVTTITSSAV--EYAQEIANLLKSHHLSIETDFRNETI 591
                       L   ++P++A V  +       E A+   + L +    ++ D    +I
Sbjct: 377 DVVDGEPRVMLKLSPKVAPVKAAVLPLVKKGEMGEKAELFRSELSTA-FMVQYDDAA-SI 434

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             + R       P       +   ++++ +R   S T +++ +  A   L 
Sbjct: 435 GKRYRRQDEIGTPFCFTVDHQTLEDQTVTVRYRDSATQERIDMSRAKEFLA 485


>gi|331083851|ref|ZP_08332960.1| alanyl-tRNA synthetase 1 [Lachnospiraceae bacterium 6_1_63FAA]
 gi|330403276|gb|EGG82836.1| alanyl-tRNA synthetase 1 [Lachnospiraceae bacterium 6_1_63FAA]
          Length = 879

 Score = 67.1 bits (162), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 30/133 (22%), Positives = 61/133 (45%), Gaps = 10/133 (7%)

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIAR 132
            HS  H++ +A++++        G  +  D   +DF   Q  +++ELA++E+ + + I  
Sbjct: 565 NHSATHLLQKALKTVLGSHVEQKGSLVTPDRLRFDFAHFQSMTAEELAKVEEIVNKEIQA 624

Query: 133 DSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRST 191
             P + + +S E+A++         K          E V +   G++  +LC G HV +T
Sbjct: 625 ALPVVTEVMSIEEAKKAGAMALFGEKY--------GEEVRVVSMGDFSKELCGGTHVSNT 676

Query: 192 GQVKKFFKLMKVA 204
           G +  F  + +  
Sbjct: 677 GVITTFKIISESG 689


>gi|228987655|ref|ZP_04147769.1| Histidyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228772115|gb|EEM20567.1| Histidyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 476

 Score = 67.1 bits (162), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 75/465 (16%), Positives = 151/465 (32%), Gaps = 64/465 (13%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWK--------IFQTLISY 282
              Y   +   +  +       + L    E+   +     +G +        ++Q +   
Sbjct: 21  HHGYNTLVPTVQTVEAGVFLFLLRLKQFEEEL-NMSIQIPRGTQDILPGTVELWQYIEGQ 79

Query: 283 MRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPM-N 340
            R   +  +Y+EI TP        +          ++   +      +  R+  L+P   
Sbjct: 80  AREICRRYNYKEIRTPIF---EHTELFLRGVGDTTDIVQKEMYSFQDRGERSLTLRPEGT 136

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
            P   +   + +      P +L   G ++R E   +     R R F Q       + +  
Sbjct: 137 APVVRSYVENKMFGDATQPTKLYYIGQMFRYERPQA----GRYRQFVQFGIEAIGSNDPA 192

Query: 401 FNECLKIHNLIISIYKDFGFEKI---MVKLSTRPEKRVGSDALWDDAENIMKG------- 450
            +   ++  L +  Y+  G + I   +  L     ++   DAL    E  +         
Sbjct: 193 IDA--EVIALAVEFYRGMGLKNIKVVLNSLGDAASRQSHRDALIAHFEPRIGEFCSDCQS 250

Query: 451 --------VLDTIKNSSQDRINT-----GVLLGEGAFYGPK-----------FEYILKDA 486
                   +LD  K+ + + + T       L  + A Y  K           FE      
Sbjct: 251 RLEKNPLRILDCKKDRNHELMGTAPSITEYLNEDSAVYYDKVQELLTMMDVPFEKDPNLV 310

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHS--------EKCHPVMIHRAVFGSIERFIGIM 538
            G D+   T+    +    F A    S          E   P M       SIER I  +
Sbjct: 311 RGLDYYQHTVFEIMSEAEGFGAITTLSGGGRYNGLVQEIGGPEMPGIGFAMSIERLIMAL 370

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
            +     LP+    I   V  +   A ++A ++A  L+   LS+E D+ +  +  + +  
Sbjct: 371 -KAENIELPIE-HSIDCYVVALGEKAKDHAAKVAFDLRKAGLSVEKDYLDRKMKAQFKSA 428

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              K   + + G+ E  +  I ++   +   ++V+L      + +
Sbjct: 429 DRLKAKFVAVLGEDELDKGIINLKDMATGEQEEVALDVFASYVAE 473


>gi|315608195|ref|ZP_07883187.1| serine--tRNA ligase [Prevotella buccae ATCC 33574]
 gi|315250164|gb|EFU30161.1| serine--tRNA ligase [Prevotella buccae ATCC 33574]
          Length = 429

 Score = 67.1 bits (162), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 48/351 (13%), Positives = 102/351 (29%), Gaps = 34/351 (9%)

Query: 110 KEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYK------VEILE 163
            E+         IEK +     R     K  L+ ++A  L +      K       E ++
Sbjct: 18  LEKKHFDGAREAIEKVLAIDTRRRDAQQKFDLNKQEANRLSKQIGALMKSGKNEEAEAVK 77

Query: 164 SIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
              A+   T     E  +      V     +          G     D+   ++ +  G 
Sbjct: 78  MKVAELKTTSNELKEEQEKAEKELVEQLCAIPNIPHEDVPEG----KDACDNVVVKEGGE 133

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYM 283
                     +   L++    D     +           +G   +  K  +  + L ++ 
Sbjct: 134 KPELPAGALCHWDLLKKYNLVDFDLGVKITG--------AGFPVYLGKMARFQRALEAFF 185

Query: 284 RRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
             + +   Y E+  P V++            Y       K       +L    L P    
Sbjct: 186 LEEARKAGYLEVQPPFVVN--------QASGYGTGQLPDKEGQMYHANLDDLYLIPTAEV 237

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQ 399
               +F   +   +ELP++   + + +R E       + GL R+  F + +     T E 
Sbjct: 238 PVTNIFRDEILDEKELPIKRCAYSACFRREAGSYGKDVRGLNRLHQFDKVEIVRIDTPEH 297

Query: 400 MFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAEN 446
            ++   ++ N +  + +       +++L                 W  A+ 
Sbjct: 298 SYDSLNEMLNHVEGLLQKLELPYHILRLCGGDMSFTSAICYDFETWSAAQQ 348


>gi|262401750|ref|ZP_06078316.1| alanyl-tRNA synthetase [Vibrio sp. RC586]
 gi|262352167|gb|EEZ01297.1| alanyl-tRNA synthetase [Vibrio sp. RC586]
          Length = 860

 Score = 67.1 bits (162), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 61/143 (42%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFS 115
             ++ I  E  R+   + HS  H++  A++ +  E     G ++  +   +DF   +  +
Sbjct: 545 DQVDAIVDEQRRAAISLNHSATHLLHAALRKVLGEHVAQKGSLVRAETLRFDFSHLEAMT 604

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           + E+ ++E+ + + I R+       ++ ++A+          K          + V +  
Sbjct: 605 AAEIKEVERLVNQEIRRNHHIETNIMNIDEAKAKGAMALFGEKY--------DDQVRVLS 656

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G++  +LC G H  +TG +  F
Sbjct: 657 IGDFSTELCGGIHASNTGDIGLF 679


>gi|163856331|ref|YP_001630629.1| histidyl-tRNA synthetase [Bordetella petrii DSM 12804]
 gi|163260059|emb|CAP42360.1| hisS [Bordetella petrii]
          Length = 431

 Score = 67.1 bits (162), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 55/425 (12%), Positives = 129/425 (30%), Gaps = 68/425 (16%)

Query: 269 HR-KGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADD 326
               G + ++   S +R  ++   Y  + TP +    L+ +     +           D 
Sbjct: 21  LPGDGAR-WEQFESIVREWLRGYGYRNVRTPVLEHTRLFARGIGEVTDIVEKEMYTFTDA 79

Query: 327 TIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
              D  T   +        ++ ++ L    + P R+   G V+R+E         R R F
Sbjct: 80  LNGDSLTMRPEMTAGVVRASIEHNLL---YDRPQRVYSIGPVFRHERPQR----GRYRQF 132

Query: 387 TQDD--AHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK------LSTRPEKRVGSD 438
            Q D  A  F   +       ++  ++  ++K  G   + ++       + R   R    
Sbjct: 133 HQIDVEALGFAGPDVDA----ELIVMLARLWKRLGLTDVRLELNSLGQPAERAAHRAALI 188

Query: 439 ALWDDAENIMKG-------------------VLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
              +   +I+                      +  + +S+    +         F G   
Sbjct: 189 EHLERHRDILDEDGQRRLYSNPLRVLDTKNPAMQAMADSAPRLFDFLGDESRAHFDGLC- 247

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI-- 537
              L    G +++     V          F   +        +     +  +   +G   
Sbjct: 248 --QLLADAGIEYRLNPRLVRGLDYYNLTVFEWVTDRLGAQGTVCGGGRYDGLIELLGGKP 305

Query: 538 ------------MIENFKGNLPLWLSPI-QAIVTTITSSAVEYAQEIANLLKSHHLSIET 584
                       +++ ++ ++P   +P  +  V     +A   A  +   L+   LS+  
Sbjct: 306 APAVGFAIGMERLLDLWEQSVPPAPTPECEVYVVHQGEAAQRLAARVGEQLRDAGLSVIV 365

Query: 585 DFRNE--TINYKIREHSIKKIPIIIICGDKEASERSIGIRRF-----GSTTTQKVSLLDA 637
              +      +K  + S  ++ +I+  G  E +  +  ++       G    Q+V+L   
Sbjct: 366 HAGSSGFKSQFKRADASGARVAVIL--GSDEVAAGTASVKFLRADAAGEAAQQQVALDRL 423

Query: 638 IPILT 642
             +L 
Sbjct: 424 ADVLK 428


>gi|329998190|ref|ZP_08303002.1| serine--tRNA ligase [Klebsiella sp. MS 92-3]
 gi|328538805|gb|EGF64880.1| serine--tRNA ligase [Klebsiella sp. MS 92-3]
          Length = 430

 Score = 67.1 bits (162), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 65/188 (34%), Gaps = 10/188 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M     +   Y E   P +++Q     +G    +  ++F  +  ++   D
Sbjct: 170 ARLHRALAQFMLDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLFHTRPLEEEA-D 228

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
              +AL P        +    + +  +LP+++      +R+E         GL+R+  F 
Sbjct: 229 SSNYALIPTAEVPLTNLVRDEIINEDDLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFD 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E       ++      + +  G     V L T              +W  
Sbjct: 289 KVEMVQIVRPEDSMAALEEMTGHAEKVLQLLGLPYRKVALCTGDMGFSACKTYDLEVWVP 348

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 349 AQNTYREI 356


>gi|90961171|ref|YP_535087.1| seryl-tRNA synthetase [Lactobacillus salivarius UCC118]
 gi|301299680|ref|ZP_07205935.1| serine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
 gi|122449395|sp|Q1WVB3|SYS_LACS1 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|90820365|gb|ABD99004.1| Seryl-tRNA synthetase [Lactobacillus salivarius UCC118]
 gi|300852720|gb|EFK80349.1| serine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
          Length = 425

 Score = 67.1 bits (162), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 52/348 (14%), Positives = 111/348 (31%), Gaps = 30/348 (8%)

Query: 112 QPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENV 171
           +P   DEL   +KK +E++       K+     +A    +  KE    +I         +
Sbjct: 24  KPEEIDELVAEDKKRRELLVETENLKKERNEVSEAIAQAKRNKEDASEQIQAMRKVGTKI 83

Query: 172 TLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQEL 231
                    D        +   +      +         D +  +     GT      E 
Sbjct: 84  KE------LDEKLAKVEENVKSMAAHLPNLPNPTIPVGPDEDSNVELYKVGTPRKFDFEP 137

Query: 232 TQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDD 290
             +    E+    D  + A+      +        F+   G K+ + + ++M     K+ 
Sbjct: 138 KAHWDIGEDLGILDFDRAAKVSGARFV--------FYKGLGAKLERAVYNFMLDEHAKEG 189

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH 350
           Y E+  P ++       +G +  ++  ++ V        +     L P         +  
Sbjct: 190 YTEVIPPYIVKSKSMYGTGQFPKFKDQVYQV--------NGEDMTLIPTAEVPLTNYYRE 241

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
            +    +LPV        +R+E   +     GL+R+  F + +   +   E  +NE  K+
Sbjct: 242 EVIPTEDLPVYFTALSPSFRSEAGSAGRDTRGLIRMHQFNKVEMVKYTKPEDSYNELEKM 301

Query: 408 HNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
                +I +  G    ++ LST              +W  A++  + +
Sbjct: 302 TKNAGNIMEKLGLPYHVITLSTGDMGFSAAMTHDLEVWMPAQDTYREI 349


>gi|62185467|ref|YP_220252.1| seryl-tRNA synthetase [Chlamydophila abortus S26/3]
 gi|81312384|sp|Q5L4Z0|SYS_CHLAB RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|62148534|emb|CAH64305.1| seryl-tRNA synthetase [Chlamydophila abortus S26/3]
          Length = 424

 Score = 67.1 bits (162), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 40/243 (16%), Positives = 80/243 (32%), Gaps = 18/243 (7%)

Query: 209 RGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFW 268
             D     + +  G           ++   ++ +  D +  A+       A    GV   
Sbjct: 114 CPDKTGNQVIKQVGALPTFSFTPKHHVELNQKLQILDFKLPAKTSGSGWPAYKNQGVC-- 171

Query: 269 HRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTI 328
               W +   L++  R      ++    P ++   +   SG    +    + V+  +   
Sbjct: 172 --LEWALLTYLLNKQREH---GFQLWLPPLLVKHEILFGSGQIPKFDGQYYRVEDGE--- 223

Query: 329 KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE---PSGSLHGLMRVRG 385
              ++  L P          +  + S ++LP+  A F   +R E         GL+RV  
Sbjct: 224 ---QSLYLIPTAEVVLNGFHSQEIFSEKDLPIYYAAFTPCFRREAGAAGAHERGLVRVHQ 280

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
           F + +   F T +Q      K+  ++  I  +      +  LST       S  +  DAE
Sbjct: 281 FHKVEMFAFTTPDQADQAYEKMLAVVEDILTELQLPYRLSLLSTGDMSFTASKTI--DAE 338

Query: 446 NIM 448
             +
Sbjct: 339 VWL 341


>gi|227485268|ref|ZP_03915584.1| histidine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172]
 gi|227236728|gb|EEI86743.1| histidine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172]
          Length = 428

 Score = 67.1 bits (162), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 13/83 (15%), Positives = 25/83 (30%)

Query: 555 AIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
            ++  ++     YA +I N L       +       +  K        +    I G  E 
Sbjct: 346 ILIIPMSDEENFYAIDILNKLHEEGKRADIYLEGGKLKKKFSYADKVGVKYAYIIGQSER 405

Query: 615 SERSIGIRRFGSTTTQKVSLLDA 637
            E  + IR   +   + V   + 
Sbjct: 406 EEGKVTIRNMQTGEQELVDFANL 428


>gi|166030431|ref|ZP_02233260.1| hypothetical protein DORFOR_00092 [Dorea formicigenerans ATCC
           27755]
 gi|166029789|gb|EDR48546.1| hypothetical protein DORFOR_00092 [Dorea formicigenerans ATCC
           27755]
          Length = 893

 Score = 67.1 bits (162), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 30/138 (21%), Positives = 61/138 (44%), Gaps = 10/138 (7%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFS 115
            ++ +   ++ R+L+   HS  H++  A++ +        G  ++ +   +DF      S
Sbjct: 563 DTVSMEVDKENRNLSARNHSATHLLQAALRQVLGTHVEQAGSYVDAERLRFDFTHFSALS 622

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            +EL Q+E  + E IA   P + + +  E+AR+   +     K          + V +  
Sbjct: 623 KEELKQVENIVNEKIAECLPVVAKNMPIEEARKTGAAALFGEKY--------GDVVRVVS 674

Query: 176 QGEW-FDLCRGPHVRSTG 192
            G++  + C G HV +TG
Sbjct: 675 MGDFSVEFCGGTHVSNTG 692


>gi|90423082|ref|YP_531452.1| alanyl-tRNA synthetase [Rhodopseudomonas palustris BisB18]
 gi|122476792|sp|Q218Q3|SYA_RHOPB RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|90105096|gb|ABD87133.1| alanyl-tRNA synthetase [Rhodopseudomonas palustris BisB18]
          Length = 890

 Score = 67.1 bits (162), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 33/142 (23%), Positives = 61/142 (42%), Gaps = 5/142 (3%)

Query: 56  EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPF 114
           + ++ +      RS     HS  H++ EA++ +  +     G  + ED   +DF  ++P 
Sbjct: 545 DTALLLEVDHTRRSSIRANHSATHLLHEALRQVLGDHIAQKGSLVAEDRLRFDFVHQKPI 604

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYK----VEILESIPAKEN 170
           S+DEL ++E    E++  +     + ++ + ARE         K    V ++    +   
Sbjct: 605 SADELRRVEDIANEVVLENDEVTTRLMAVDDAREAGARALFGEKYGDEVRVVTMGKSARQ 664

Query: 171 VTLYRQGEWFDLCRGPHVRSTG 192
                 G   +LC G HVR TG
Sbjct: 665 HGSNALGWSVELCGGTHVRRTG 686


>gi|229141141|ref|ZP_04269682.1| Histidyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST26]
 gi|228642304|gb|EEK98594.1| Histidyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST26]
 gi|324328306|gb|ADY23566.1| histidyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 476

 Score = 67.1 bits (162), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 75/465 (16%), Positives = 151/465 (32%), Gaps = 64/465 (13%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWK--------IFQTLISY 282
              Y   +   +  +       + L    E+   +     +G +        ++Q +   
Sbjct: 21  HHGYNTLVPTVQTVEAGVFLFLLRLKQFEEEL-NMSIQIPRGTQDILPGTVELWQYIEGQ 79

Query: 283 MRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPM-N 340
            R   +  +Y+EI TP        +          ++   +      +  R+  L+P   
Sbjct: 80  AREICRRYNYKEIRTPIF---EHTELFLRGVGDTTDIVQKEMYSFQDRGERSLTLRPEGT 136

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
            P   +   + +      P +L   G ++R E   +     R R F Q       + +  
Sbjct: 137 APVVRSYVENKMFGDATQPTKLYYIGQMFRYERPQA----GRYRQFVQFGIEAIGSNDPA 192

Query: 401 FNECLKIHNLIISIYKDFGFEKI---MVKLSTRPEKRVGSDALWDDAENIMKG------- 450
            +   ++  L +  Y+  G + I   +  L     ++   DAL    E  +         
Sbjct: 193 IDA--EVIALAVEFYRGMGLKNIKVVLNSLGDAASRQAHRDALIAHFEPRIGEFCSDCQS 250

Query: 451 --------VLDTIKNSSQDRINT-----GVLLGEGAFYGPK-----------FEYILKDA 486
                   +LD  K+ + + + T       L  + A Y  K           FE      
Sbjct: 251 RLEKNPLRILDCKKDRNHELMGTAPSITEYLNEDSAVYYEKVQELLTMMDVPFEKDPNLV 310

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHS--------EKCHPVMIHRAVFGSIERFIGIM 538
            G D+   T+    +    F A    S          E   P M       SIER I  +
Sbjct: 311 RGLDYYQHTVFEIMSEAEGFGAITTLSGGGRYNGLVQEIGGPEMPGIGFAMSIERLIMAL 370

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
            +     LP+    I   V  +   A ++A ++A  L+   LS+E D+ +  +  + +  
Sbjct: 371 -KAENIELPIE-HSIDCYVVALGEKAKDHAAKVAFDLRKAGLSVEKDYLDRKMKAQFKSA 428

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              K   + + G+ E  +  I ++   +   ++V+L      + +
Sbjct: 429 DRLKAKFVAVLGEDELDKGIINLKDMATGEQEEVALDVFASYVAE 473


>gi|149275931|ref|ZP_01882076.1| glycine--tRNA ligase (glycyl-tRNA synthetase) [Pedobacter sp.
           BAL39]
 gi|149233359|gb|EDM38733.1| glycine--tRNA ligase (glycyl-tRNA synthetase) [Pedobacter sp.
           BAL39]
          Length = 493

 Score = 67.1 bits (162), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 49/341 (14%), Positives = 99/341 (29%), Gaps = 53/341 (15%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+          +      L+P    G    F +  K+   ++P  +A+ G  +RNE  
Sbjct: 168 FNLMFSTQFGAMAEGSEEVYLRPETAQGIFVNFLNVQKTGRMKIPFGIAQIGKAFRNEVI 227

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
            +   +MR+R F Q +   F    +            +  ++  G      +     +  
Sbjct: 228 -ARQFIMRMREFEQMEMQFFVRPGEDAKWFAYWKEARLKWHQALGTPADKYRFHDHVKLA 286

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
             ++A  D                 +     G    EG      F+              
Sbjct: 287 HYANAATDI----------------EFEFPFGFKEVEGIHSRTDFD------------LS 318

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIH--RAVFGSIERFIGIMIENFK--------- 543
             Q       ++    +N   +     + +      G    F+  MI  F+         
Sbjct: 319 QHQQFSGKKMQYFDNDLNEDGKPYGNYIPYVIETSIGLDRMFLLTMINAFEEEDLSEGEK 378

Query: 544 ------GNLPLWLSPIQAIVTTITSSAV--EYAQEIANLLK-SHHLSIETDFRNETINYK 594
                   L   L+P++  +  +T      E A+EI N LK   +         + I  +
Sbjct: 379 QDSRTLLRLHPCLAPVKVAIFPLTKKDGLPEKAKEIMNSLKLDFNC---IYEEKDAIGKR 435

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
            R       P  +    +   + ++ +R   S   Q++ + 
Sbjct: 436 YRRQDAIGTPFCVTVDHQTLEDNTVTVRHRDSMEQQRIEIE 476


>gi|15606507|ref|NP_213887.1| alanyl-tRNA synthetase [Aquifex aeolicus VF5]
 gi|6226165|sp|O67323|SYA_AQUAE RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|2983727|gb|AAC07289.1| alanyl-tRNA synthetase [Aquifex aeolicus VF5]
          Length = 867

 Score = 67.1 bits (162), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 65/143 (45%), Gaps = 11/143 (7%)

Query: 65  EDPRSLAVIR-HSCAHIMAEAVQSIWPEVQVAIGPIIEDGF-YYDFDKEQPFSSDELAQI 122
           +  R   ++R H+  H++  A++++  E     G ++ D +  +DF      + +EL ++
Sbjct: 548 DKERRWDIMRNHTATHLLHAALRNVLGEHVRQAGSLVADKYLRFDFTHFSALTEEELKRV 607

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FD 181
           E+ + E I  + P     +++++A +         K          E V +   GE+  +
Sbjct: 608 EELVNEKIRENLPVNVMEMAYDEALKTGAIAIFEEKY--------GERVRVISCGEFSKE 659

Query: 182 LCRGPHVRSTGQVKKFFKLMKVA 204
           LC G HV +TG +  F  + + +
Sbjct: 660 LCGGTHVSATGDIGYFKIISESS 682


>gi|298500953|ref|ZP_07010754.1| LOW QUALITY PROTEIN: alanyl-tRNA synthetase [Vibrio cholerae MAK
           757]
 gi|297540201|gb|EFH76261.1| LOW QUALITY PROTEIN: alanyl-tRNA synthetase [Vibrio cholerae MAK
           757]
          Length = 551

 Score = 67.1 bits (162), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 61/143 (42%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFS 115
             ++ I  E  R+   + HS  H++  A++ +  E     G ++  +   +DF   +  +
Sbjct: 236 DQVDAIVDEKRRAAISLNHSATHLLHAALRKVLGEHVAQKGSLVRAETLRFDFSHLEAMT 295

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           + E+ ++E+ + + + R+       ++ ++A+          K          + V +  
Sbjct: 296 AAEIKEVERLVNQEVRRNHSIETNIMNIDEAKAKGAMALFGEKY--------DDQVRVLS 347

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G++  +LC G H  +TG +  F
Sbjct: 348 MGDFSTELCGGIHASNTGDIGLF 370


>gi|262149022|ref|ZP_06028166.1| alanyl-tRNA synthetase [Vibrio cholerae INDRE 91/1]
 gi|262031167|gb|EEY49787.1| alanyl-tRNA synthetase [Vibrio cholerae INDRE 91/1]
          Length = 873

 Score = 67.1 bits (162), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 61/143 (42%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFS 115
             ++ I  E  R+   + HS  H++  A++ +  E     G ++  +   +DF   +  +
Sbjct: 545 DQVDAIVDEKRRAAISLNHSATHLLHAALRKVLGEHVAQKGSLVRAETLRFDFSHLEAMT 604

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           + E+ ++E+ + + + R+       ++ ++A+          K          + V +  
Sbjct: 605 AAEIKEVERLVNQEVRRNHSIETNIMNIDEAKAKGAMALFGEKY--------DDQVRVLS 656

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G++  +LC G H  +TG +  F
Sbjct: 657 MGDFSTELCGGIHASNTGDIGLF 679


>gi|153829905|ref|ZP_01982572.1| alanyl-tRNA synthetase [Vibrio cholerae 623-39]
 gi|148874593|gb|EDL72728.1| alanyl-tRNA synthetase [Vibrio cholerae 623-39]
          Length = 860

 Score = 67.1 bits (162), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 61/143 (42%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFS 115
             ++ I  E  R+   + HS  H++  A++ +  E     G ++  +   +DF   +  +
Sbjct: 545 DQVDAIVDEKRRAAISLNHSATHLLHAALRKVLGEHVAQKGSLVRAETLRFDFSHLEAMT 604

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           + E+ ++E+ + + + R+       ++ ++A+          K          + V +  
Sbjct: 605 AAEIKEVERLVNQEVRRNHSIETNIMNIDEAKAKGAMALFGEKY--------DDQVRVLS 656

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G++  +LC G H  +TG +  F
Sbjct: 657 MGDFSTELCGGIHASNTGDIGLF 679


>gi|147675089|ref|YP_001216045.1| alanyl-tRNA synthetase [Vibrio cholerae O395]
 gi|229520840|ref|ZP_04410262.1| alanyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
 gi|262169855|ref|ZP_06037545.1| alanyl-tRNA synthetase [Vibrio cholerae RC27]
 gi|205830284|sp|A5F9B7|SYA_VIBC3 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|146316972|gb|ABQ21511.1| alanyl-tRNA synthetase [Vibrio cholerae O395]
 gi|227012371|gb|ACP08581.1| alanyl-tRNA synthetase [Vibrio cholerae O395]
 gi|229342073|gb|EEO07069.1| alanyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
 gi|262021589|gb|EEY40300.1| alanyl-tRNA synthetase [Vibrio cholerae RC27]
          Length = 860

 Score = 67.1 bits (162), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 61/143 (42%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFS 115
             ++ I  E  R+   + HS  H++  A++ +  E     G ++  +   +DF   +  +
Sbjct: 545 DQVDAIVDEKRRAAISLNHSATHLLHAALRKVLGEHVAQKGSLVRAETLRFDFSHLEAMT 604

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           + E+ ++E+ + + + R+       ++ ++A+          K          + V +  
Sbjct: 605 AAEIKEVERLVNQEVRRNHSIETNIMNIDEAKAKGAMALFGEKY--------DDQVRVLS 656

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G++  +LC G H  +TG +  F
Sbjct: 657 MGDFSTELCGGIHASNTGDIGLF 679


>gi|254226851|ref|ZP_04920422.1| alanyl-tRNA synthetase [Vibrio cholerae V51]
 gi|125620648|gb|EAZ49011.1| alanyl-tRNA synthetase [Vibrio cholerae V51]
          Length = 860

 Score = 67.1 bits (162), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 61/143 (42%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFS 115
             ++ I  E  R+   + HS  H++  A++ +  E     G ++  +   +DF   +  +
Sbjct: 545 DQVDAIVDEKRRAAISLNHSATHLLHAALRKVLGEHVAQKGSLVRAETLRFDFSHLEAMT 604

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           + E+ ++E+ + + + R+       ++ ++A+          K          + V +  
Sbjct: 605 AAEIKEVERLVNQEVRRNHSIETNIMNIDEAKAKGAMALFGEKY--------DDQVRVLS 656

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G++  +LC G H  +TG +  F
Sbjct: 657 MGDFSTELCGGIHASNTGDIGLF 679


>gi|15640567|ref|NP_230196.1| alanyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121590679|ref|ZP_01678012.1| alanyl-tRNA synthetase [Vibrio cholerae 2740-80]
 gi|121728567|ref|ZP_01681589.1| alanyl-tRNA synthetase [Vibrio cholerae V52]
 gi|153819108|ref|ZP_01971775.1| alanyl-tRNA synthetase [Vibrio cholerae NCTC 8457]
 gi|153823946|ref|ZP_01976613.1| alanyl-tRNA synthetase [Vibrio cholerae B33]
 gi|227080728|ref|YP_002809279.1| alanyl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|229507157|ref|ZP_04396663.1| alanyl-tRNA synthetase [Vibrio cholerae BX 330286]
 gi|229508981|ref|ZP_04398469.1| alanyl-tRNA synthetase [Vibrio cholerae B33]
 gi|229519648|ref|ZP_04409091.1| alanyl-tRNA synthetase [Vibrio cholerae RC9]
 gi|229606165|ref|YP_002876813.1| alanyl-tRNA synthetase [Vibrio cholerae MJ-1236]
 gi|254850784|ref|ZP_05240134.1| alanyl-tRNA synthetase [Vibrio cholerae MO10]
 gi|255744228|ref|ZP_05418181.1| alanyl-tRNA synthetase [Vibrio cholera CIRS 101]
 gi|12644031|sp|Q56648|SYA_VIBCH RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|9654973|gb|AAF93713.1| alanyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121547465|gb|EAX57573.1| alanyl-tRNA synthetase [Vibrio cholerae 2740-80]
 gi|121629179|gb|EAX61620.1| alanyl-tRNA synthetase [Vibrio cholerae V52]
 gi|126510340|gb|EAZ72934.1| alanyl-tRNA synthetase [Vibrio cholerae NCTC 8457]
 gi|126518530|gb|EAZ75753.1| alanyl-tRNA synthetase [Vibrio cholerae B33]
 gi|227008616|gb|ACP04828.1| alanyl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|229344337|gb|EEO09312.1| alanyl-tRNA synthetase [Vibrio cholerae RC9]
 gi|229353906|gb|EEO18840.1| alanyl-tRNA synthetase [Vibrio cholerae B33]
 gi|229355902|gb|EEO20822.1| alanyl-tRNA synthetase [Vibrio cholerae BX 330286]
 gi|229368820|gb|ACQ59243.1| alanyl-tRNA synthetase [Vibrio cholerae MJ-1236]
 gi|254846489|gb|EET24903.1| alanyl-tRNA synthetase [Vibrio cholerae MO10]
 gi|255738168|gb|EET93560.1| alanyl-tRNA synthetase [Vibrio cholera CIRS 101]
          Length = 860

 Score = 67.1 bits (162), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 61/143 (42%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFS 115
             ++ I  E  R+   + HS  H++  A++ +  E     G ++  +   +DF   +  +
Sbjct: 545 DQVDAIVDEKRRAAISLNHSATHLLHAALRKVLGEHVAQKGSLVRAETLRFDFSHLEAMT 604

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           + E+ ++E+ + + + R+       ++ ++A+          K          + V +  
Sbjct: 605 AAEIKEVERLVNQEVRRNHSIETNIMNIDEAKAKGAMALFGEKY--------DDQVRVLS 656

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G++  +LC G H  +TG +  F
Sbjct: 657 MGDFSTELCGGIHASNTGDIGLF 679


>gi|298693331|gb|ADI96553.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED133]
          Length = 428

 Score = 67.1 bits (162), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 52/357 (14%), Positives = 124/357 (34%), Gaps = 35/357 (9%)

Query: 106 YDFDKEQPFSSDELAQIEKKMQEIIA--RDSPFLKQYLSHEKARELFESKKEAYKVEILE 163
            +   + P   DE+ +++++ +++I+   +    +  +S E A +    +     +  + 
Sbjct: 18  IELRGDDPKVVDEILELDEQRRKLISATEEMKARRNKVSEEIALKKRNKENADDVIAEMR 77

Query: 164 SIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
           ++         +  E  D       + TG + +   L+         D +   + + +GT
Sbjct: 78  TLGDDIKEKDSQLNE-IDN------KMTGILCRIPNLISDDVPQGESDEDNVEVKK-WGT 129

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYM 283
                 E   +   +EE +  D  + A+      +             G ++ + L++YM
Sbjct: 130 PREFSFEPKAHWDIVEELKMADFDRAAKVSGARFVYLTNE--------GAQLERALMNYM 181

Query: 284 RRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
             K   +  Y E+  PQ+++      +G    +  ++F V        +       P   
Sbjct: 182 ITKHTTQHGYTEMMVPQLVNADTMYGTGQLPKFEEDLFKV--------EKEGLYTIPTAE 233

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKE 398
                 + + +     LP +     + +R+E   +     GL+R+  F + +   F   E
Sbjct: 234 VPLTNFYRNEIIQPGVLPEKFTGQSACFRSEAGSAGRDTRGLIRLHQFDKVEMVCFEQPE 293

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
             +N   ++     +I ++ G     V L T              +W  + N  K +
Sbjct: 294 DSWNALEEMTTNAEAILEELGLPYRRVILCTGDIGFSASKTYDLEVWLPSYNDYKEI 350


>gi|294619786|ref|ZP_06699182.1| seryl-tRNA synthetase [Enterococcus faecium E1679]
 gi|291593970|gb|EFF25448.1| seryl-tRNA synthetase [Enterococcus faecium E1679]
          Length = 422

 Score = 67.1 bits (162), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 40/244 (16%), Positives = 93/244 (38%), Gaps = 22/244 (9%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIF 276
           GT      E+ ++      + E + H ++A  +D+          GS  +++   G ++ 
Sbjct: 115 GTDEEDNVEIRRWSEPRTFAFEPKPHWEIAENLDILDFERGAKVAGSRFVYYKGLGARLE 174

Query: 277 QTLISYMRRK--IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           + + ++M  +   +  Y E+ TP +++      +G +  ++ ++F ++  D T+      
Sbjct: 175 RAVYNFMLDQHIYEHGYTEMITPYIVNSKAMFGTGQFPKFKEDVFQLENTDLTLI----- 229

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDA 391
              P         +N  +    +LP+        +R+E   +     GL+R+  F + + 
Sbjct: 230 ---PTAEVPLTNYYNDEILDGADLPIYFTALSPAFRSEAGSAGRDTRGLIRLHQFNKVEM 286

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENI 447
             F   E  + E  K+      I K       ++ LST              +W  A++ 
Sbjct: 287 VKFSDAEHSYEELEKMTADAEDILKKLHLPYRVMALSTGDMGFSAAKTYDLEVWIPAQDT 346

Query: 448 MKGV 451
            + +
Sbjct: 347 YREI 350


>gi|147677396|ref|YP_001211611.1| alanyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
 gi|146273493|dbj|BAF59242.1| alanyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
          Length = 330

 Score = 67.1 bits (162), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 29/139 (20%), Positives = 61/139 (43%), Gaps = 10/139 (7%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSDELAQIEKKM 126
           R+     HS  H++ +A++ +        G ++E     +DF      + +EL ++E+ +
Sbjct: 10  RAATCRNHSATHLLHKALKEVLGGHVNQAGSLVEPERLRFDFTHYAAATPEELQKVEELV 69

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRG 185
             ++    P      S  +AR++  +     K          E V + + G++  +LC G
Sbjct: 70  NRMVLSALPVEAFETSLAEARKMGAAALFGEKY--------GERVRVVKMGDFSLELCGG 121

Query: 186 PHVRSTGQVKKFFKLMKVA 204
            H+R+T +V  F  L + +
Sbjct: 122 THLRNTAEVGLFKLLGESS 140


>gi|315186817|gb|EFU20575.1| histidyl-tRNA synthetase [Spirochaeta thermophila DSM 6578]
          Length = 437

 Score = 67.1 bits (162), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 73/210 (34%), Gaps = 14/210 (6%)

Query: 430 RPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGR 489
           R E+ VG+D         +  V+  +  +    I+  +  G   + G  FE  L D    
Sbjct: 228 RMEEGVGADNPHLARLKEIWAVIGELGLARFFTIDPSITRGLDYYTGVVFETFLSDLPDI 287

Query: 490 DWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW 549
              C           R++       ++    V     +    +R +  M E         
Sbjct: 288 GSVCSG--------GRYDNLVGLYSAQSMSGVGASIGL----DRLMAAMQELGMLEAIPT 335

Query: 550 LSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIIC 609
           ++P   +V  +    + +   +A  L++  +  E   +   +  +      K IP  +I 
Sbjct: 336 MAPE-VLVVCMEERFLAHYHGVAAALRARGVRTEVYPQARKLGQQFSYAEKKGIPFALIM 394

Query: 610 GDKEASERSIGIRRFGSTTTQKV-SLLDAI 638
           G+ E +  ++ ++   + T + V  L + +
Sbjct: 395 GEDEIAAGAMALKDLAARTQRVVRGLEEVV 424


>gi|257885573|ref|ZP_05665226.1| seryl-tRNA synthetase [Enterococcus faecium 1,231,501]
 gi|261206902|ref|ZP_05921591.1| seryl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289567404|ref|ZP_06447770.1| seryl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|293557178|ref|ZP_06675729.1| seryl-tRNA synthetase [Enterococcus faecium E1039]
 gi|294614525|ref|ZP_06694437.1| seryl-tRNA synthetase [Enterococcus faecium E1636]
 gi|257821429|gb|EEV48559.1| seryl-tRNA synthetase [Enterococcus faecium 1,231,501]
 gi|260078530|gb|EEW66232.1| seryl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289160800|gb|EFD08734.1| seryl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|291592618|gb|EFF24215.1| seryl-tRNA synthetase [Enterococcus faecium E1636]
 gi|291600659|gb|EFF30960.1| seryl-tRNA synthetase [Enterococcus faecium E1039]
          Length = 423

 Score = 67.1 bits (162), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 40/244 (16%), Positives = 93/244 (38%), Gaps = 22/244 (9%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIF 276
           GT      E+ ++      + E + H ++A  +D+          GS  +++   G ++ 
Sbjct: 115 GTDEEDNVEIRRWSEPRTFAFEPKPHWEIAENLDILDFERGAKVAGSRFVYYKGLGARLE 174

Query: 277 QTLISYMRRK--IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           + + ++M  +   +  Y E+ TP +++      +G +  ++ ++F ++  D T+      
Sbjct: 175 RAVYNFMLDQHIYEHGYTEMITPYIVNSKAMFGTGQFPKFKEDVFQLENTDLTLI----- 229

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDA 391
              P         +N  +    +LP+        +R+E   +     GL+R+  F + + 
Sbjct: 230 ---PTAEVPLTNYYNDEILDGADLPIYFTALSPAFRSEAGSAGRDTRGLIRLHQFNKVEM 286

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENI 447
             F   E  + E  K+      I K       ++ LST              +W  A++ 
Sbjct: 287 VKFSDAEHSYEELEKMTADAEDILKKLHLPYRVMALSTGDMGFSAAKTYDLEVWIPAQDT 346

Query: 448 MKGV 451
            + +
Sbjct: 347 YREI 350


>gi|256824814|ref|YP_003148774.1| histidyl-tRNA synthetase [Kytococcus sedentarius DSM 20547]
 gi|256688207|gb|ACV06009.1| histidyl-tRNA synthetase [Kytococcus sedentarius DSM 20547]
          Length = 481

 Score = 67.1 bits (162), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 33/221 (14%), Positives = 76/221 (34%), Gaps = 22/221 (9%)

Query: 436 GSDALWDDAENIMKGVLDTIKNSSQDR----INTGVLLGEGAFYGPKFEYILKDA--IGR 489
           G DA  D     ++ VL+ +++         +N  +  G   + G  +E  L +   +G 
Sbjct: 274 GRDAELDAGVAELREVLEMLRHLGVPESDYCVNFAIARGLDYYTGTVYETFLDEHPELGS 333

Query: 490 DWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW 549
               G  +      ++ +   V                   + R    ++EN  G +   
Sbjct: 334 ICSGGRYENLAGQYTKSSLPGVGMSI--------------GLSRLFWQLMEN--GLVDDE 377

Query: 550 LSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIIC 609
            S +Q ++  +  + +  A  +A  L+S  L++E       +  + +      I  + + 
Sbjct: 378 PSTVQVLIPLLDEALLPEALGLAAELRSAGLAVENVLEPAKLAKQFKHADRAGIRFVAVL 437

Query: 610 GDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDC 650
           G +E  +  + ++    +    V   +    L  E   P+ 
Sbjct: 438 GAQEVEKGVVTVKDLARSDQFAVERGELARALRVELAQPEL 478


>gi|229081668|ref|ZP_04214163.1| Histidyl-tRNA synthetase 2 [Bacillus cereus Rock4-2]
 gi|228701672|gb|EEL54163.1| Histidyl-tRNA synthetase 2 [Bacillus cereus Rock4-2]
          Length = 462

 Score = 67.1 bits (162), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 76/465 (16%), Positives = 151/465 (32%), Gaps = 64/465 (13%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWK--------IFQTLISY 282
              Y   +   +  +       + L    E+   +     +G +        ++Q +   
Sbjct: 7   HHGYNTLVPTVQTVEAGVFLFLLRLKQFEEEL-NMSIQIPRGTQDILPGTVELWQYIEGQ 65

Query: 283 MRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPM-N 340
            R   +  +Y+EI TP        +          ++   +      +  R+  L+P   
Sbjct: 66  AREICRRYNYKEIRTPIF---EHTELFLRGVGDTTDIVQKEMYSFQDRGERSLTLRPEGT 122

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
            P   +   + +      P +L   G ++R E   +     R R F Q       + +  
Sbjct: 123 APVVRSYVENKMFGDATQPTKLYYIGQMFRYERPQA----GRYRQFVQFGIEAIGSNDPA 178

Query: 401 FNECLKIHNLIISIYKDFGFEKI---MVKLSTRPEKRVGSDALWDDAENIMKG------- 450
            +   ++  L +  Y+  G + I   +  L     ++   DAL    E  +         
Sbjct: 179 IDA--EVIALAVEFYRGMGLKNIKVVLNSLGDAASRQAHRDALIAHFEPRIGEFCSDCQS 236

Query: 451 --------VLDTIKNSSQDRINT-----GVLLGEGAFYGPK-----------FEYILKDA 486
                   +LD  K+ + + + T       L  + A Y  K           FE      
Sbjct: 237 RLEKNPLRILDCKKDRNHELMGTAPSITEYLNEDSAIYYDKVQELLTMMDVPFEKDPNLV 296

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHS--------EKCHPVMIHRAVFGSIERFIGIM 538
            G D+   T+    +    F A    S          E   P M       SIER I  +
Sbjct: 297 RGLDYYQHTVFEIMSEAEGFGAITTLSGGGRYNGLVQEIGGPEMPGIGFAMSIERLIMAL 356

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
            +     LPL    I   V  +   A ++A ++A  L+   LS+E D+ +  +  + +  
Sbjct: 357 -KAENIELPLE-HSIDCYVVALGEKAKDHAAKVAFDLRKAGLSVEKDYLDRKMKAQFKSA 414

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              K   + + G+ E  +  I ++   +   ++V+L      + +
Sbjct: 415 DRLKAKFVAVLGEDELDKGIINLKDMATGEQEEVALDVFASYVAE 459


>gi|325679252|ref|ZP_08158839.1| alanine--tRNA ligase [Ruminococcus albus 8]
 gi|324109038|gb|EGC03267.1| alanine--tRNA ligase [Ruminococcus albus 8]
          Length = 885

 Score = 67.1 bits (162), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/181 (19%), Positives = 75/181 (41%), Gaps = 25/181 (13%)

Query: 36  KKAVAVAINGKVCDLSDPVREGSI---EIITPEDPRSLA---VIRHSCAHIMAEAVQSIW 89
           +KAV          L   V EG++   + +T +  ++     +  HSCAH++  A++++ 
Sbjct: 527 QKAVGGKF-----ALKVKVTEGALTKGQAVTFKVDKAKRLATMRNHSCAHLLQSALRTVL 581

Query: 90  PEVQVAIGPIIED-GFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE 148
            E     G +++     +DF   +  ++DE AQ+E  + + I        + +   +A++
Sbjct: 582 GEHVHQAGQLVDSQRLRFDFSHFEAMTADEKAQVEALVNKYIFDALDITMEEMPIAEAQK 641

Query: 149 LFESKKEAYKVEILESIPAKENVTLYRQGE-----WFDLCRGPHVRSTGQVKKFFKLMKV 203
           L        K          E V +   G+       + C G H+ +T ++  F  + + 
Sbjct: 642 LGAMALFGEKY--------GETVRVVTMGDRANAASIEFCGGTHLDNTSKIGLFKIISEN 693

Query: 204 A 204
           +
Sbjct: 694 S 694


>gi|228917037|ref|ZP_04080597.1| Histidyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228842644|gb|EEM87732.1| Histidyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
          Length = 476

 Score = 67.1 bits (162), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 74/465 (15%), Positives = 151/465 (32%), Gaps = 64/465 (13%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWK--------IFQTLISY 282
              Y   +   +  +       + L    E+   +     +G +        ++Q +   
Sbjct: 21  HHGYNTLVPTVQTVEAGVFLFLLRLKQFEEEL-NMSIQIPRGTQDILPGTVELWQYIEGQ 79

Query: 283 MRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPM-N 340
            R   +  +Y+EI TP        +          ++   +      +  R+  L+P   
Sbjct: 80  AREICRRYNYKEIRTPIF---EHTELFLRGVGDTTDIVQKEMYSFQDRGERSLTLRPEGT 136

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
            P   +   + +      P +L   G ++R E   +     R R F Q       + +  
Sbjct: 137 APVVRSYVENKMFGDATQPTKLYYIGQMFRYERPQA----GRYRQFVQFGIEAIGSNDPA 192

Query: 401 FNECLKIHNLIISIYKDFGFEKI---MVKLSTRPEKRVGSDALWDDAENIMKG------- 450
            +   ++  L +  Y+  G + I   +  L     ++   DAL    E  +         
Sbjct: 193 IDA--EVIALAVEFYRSMGLKNIKVVLNSLGDAASRQAHRDALIAHFEPRIGEFCSDCQS 250

Query: 451 --------VLDTIKNSSQDRINT-----GVLLGEGAFYGPK-----------FEYILKDA 486
                   +LD  K+ + + + T       L  + A Y  K           FE      
Sbjct: 251 RLEKNPLRILDCKKDRNHELMGTAPSITEYLNEDSAVYYDKVQELLTMMDVPFEKDPNLV 310

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHS--------EKCHPVMIHRAVFGSIERFIGIM 538
            G D+   T+    +    F A    S          E   P M       SIER I  +
Sbjct: 311 RGLDYYQHTVFEIMSEAEGFGAITTLSGGGRYNGLVQEIGGPEMPGIGFAMSIERLIMAL 370

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
            +     LP+    I   V  +   A ++A ++A  L+   L++E D+ +  +  + +  
Sbjct: 371 -KAENIELPIE-HSIDCYVVALGEKAKDHAAKVAFDLRKAGLAVEKDYLDRKMKAQFKSA 428

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              K   + + G+ E  +  I ++   +   ++V+L      + +
Sbjct: 429 DRLKAKFVAVLGEDELDKGIINLKDMATGEQEEVALDVFASYVAE 473


>gi|158522755|ref|YP_001530625.1| seryl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
 gi|238686901|sp|A8ZXS1|SYS_DESOH RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|158511581|gb|ABW68548.1| seryl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
          Length = 425

 Score = 67.1 bits (162), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/223 (15%), Positives = 77/223 (34%), Gaps = 21/223 (9%)

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRK----GWKIFQTLISYMRRKI--KDDYEEIN 295
             R H ++   + +F  A                G  + + LI++M      +  Y E  
Sbjct: 136 APRPHEEIGEALGIFDFARAAKIAGARFPLYKGAGALMERALINFMLDIHTTEHGYTECL 195

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
            P +++      +G    +  ++F +        +   F L P        +F   + + 
Sbjct: 196 PPLMVNAKTMTGTGQLPKFEEDLFKL--------ERWGFYLIPTAEVPVTNIFADEILNE 247

Query: 356 RELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
            +LP++   +   +R+E         GL+R   F + +   F   E  ++E  K+     
Sbjct: 248 ADLPIKYTAYTPCFRSEAGSYGKDTKGLIRQHQFNKVELVKFAHPEHSYDELEKLLADAE 307

Query: 413 SIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
           +I +  G    ++ L +              +W  A+N  + +
Sbjct: 308 TILQRLGLAYRVITLCSGDMGFSAAKTYDIEVWFPAQNRYREI 350


>gi|113953126|ref|YP_731293.1| seryl-tRNA synthetase [Synechococcus sp. CC9311]
 gi|123327682|sp|Q0I8C9|SYS_SYNS3 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|113880477|gb|ABI45435.1| seryl-tRNA synthetase [Synechococcus sp. CC9311]
          Length = 425

 Score = 67.1 bits (162), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 60/188 (31%), Gaps = 16/188 (8%)

Query: 272 GWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G ++ + LI++M        Y E+  P +++      SG    +    F     D     
Sbjct: 173 GARLERALINFMLDLHTGKGYREVLPPVLVNSASLTGSGQLPKFAEESFRCADDD----- 227

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
                L P       ++    +    +LP+R   +   +R E         GL+R+  F 
Sbjct: 228 ---LWLTPTAEVPLTSLHRDEIIPSDQLPLRYVAYSPCFRREAGSYGRDTRGLIRLHQFN 284

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP----EKRVGSDALWDD 443
           + + + F   E        I     ++ +       +++L T        R     +W  
Sbjct: 285 KVELYWFVHPEHSEEAHELITADAEAVLQALELPYRVLELCTGDLGFSAARTYDLEVWLA 344

Query: 444 AENIMKGV 451
                + +
Sbjct: 345 GAGAYREI 352


>gi|85712448|ref|ZP_01043497.1| Alanyl-tRNA synthetase [Idiomarina baltica OS145]
 gi|85693726|gb|EAQ31675.1| Alanyl-tRNA synthetase [Idiomarina baltica OS145]
          Length = 867

 Score = 67.1 bits (162), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 70/155 (45%), Gaps = 16/155 (10%)

Query: 56  EGSIEIIT-----PEDPRSLAVIR-HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDF 108
           + +I++        +  R   + R HS  H++  A++ I  +     G ++E +   +DF
Sbjct: 529 DCTIKLGDAVTAEIDSERRANIRRNHSATHLLHAALRDILGDHVQQKGSLVEAERMRFDF 588

Query: 109 DKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK 168
              +P +  ++ ++E+ + E I ++     Q ++ ++A++         K          
Sbjct: 589 AHFEPLTKAQITELERVVNEQIRKNVRLTTQVMNIDEAKKAGAMALFGEKY--------D 640

Query: 169 ENVTLYRQGEW-FDLCRGPHVRSTGQVKKFFKLMK 202
           ++V + R GE+  +LC G HV +TG +  F    +
Sbjct: 641 DDVRVVRMGEFSMELCGGTHVAATGDIGLFRITHE 675


>gi|290559795|gb|EFD93119.1| tRNA synthetase class II (G H P and S) [Candidatus Parvarchaeum
           acidophilus ARMAN-5]
          Length = 492

 Score = 67.1 bits (162), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 87/489 (17%), Positives = 166/489 (33%), Gaps = 91/489 (18%)

Query: 232 TQYLYFLEESEKRDHRKLAREMDLFHIAEDGSG--VIFWH--RKGWKIFQTLISYMRRKI 287
                     E+  +  L+R +  FH +E GS     FW     G++IF  L++  R+ +
Sbjct: 3   NNEDKRYTSDEELTNLALSRGI-FFHTSEIGSDNISGFWEYGPVGFRIFNNLLTQWRKLV 61

Query: 288 KD-DYEEINTPQVLDQHLWQQSGHWDSY---------RANMFAVKCADDTIKDLRTF--- 334
              +  EI+   VL + + Q SGH D++           +++ V    +  ++ R+F   
Sbjct: 62  NSMNGVEISGSVVLPKKVLQASGHEDNFFDMEIACVKCGSVYRVDKLLEEKENSRSFEGL 121

Query: 335 -------------------------------------------ALKPMNCPGHVAVFNH- 350
                                                       L+P  C      F   
Sbjct: 122 SEGEYLNYIKEYGIKCAKCGGELGEIKKFGTMFPLKIGEDVQGYLRPEACQSIFLDFKRV 181

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
              S R+ P+ +A+ G  +RNE S   + L+R R F Q+D  +F  ++    +     + 
Sbjct: 182 FDTSGRKFPLVIAQVGKAFRNEISPR-NNLIRQREFYQNDIEIFFVEDNFELK----EDY 236

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
            + IY       + V +S         + +   A + + G L +I    +D I    L  
Sbjct: 237 TVQIYDKEKNNTMNVNISAALSDGTIKNKVTAYALSKIYGFLLSIGF-DKDVIRFRKLYE 295

Query: 471 EGAFYGP---KFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
           + AFY       E    D+      C      D +   ++ A  +N  S       +   
Sbjct: 296 DKAFYAEESFDLEIKKGDSWVELVACNHRGIHDLSSYEKYGAKGMNIDSNIPKVFELSMG 355

Query: 527 VFGSIERFIGIMI--------ENFKGNLPLWLSPIQAIV--TTITSSAVEYAQEIANLLK 576
                +R   +++        E    +L   +SP +  +            A EI    +
Sbjct: 356 ----TDRLFYLLLLVSMKKDSERRWLSLDSKISPFKYAIFPLVSKDGVDSKASEI---FE 408

Query: 577 SHHLSIETDFRN-ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
           +     +  + +  +I  + R+     + +      +     ++ IR   S    ++S+ 
Sbjct: 409 NSVYRDDILYSDSGSIGKRYRKAEEIGVRLAFTVDYESLENETVTIRESDSMKQFRISIN 468

Query: 636 DAIPILTKE 644
             I I+TKE
Sbjct: 469 -YIDIITKE 476


>gi|190573725|ref|YP_001971570.1| alanyl-tRNA synthetase [Stenotrophomonas maltophilia K279a]
 gi|205830222|sp|B2FL33|SYA_STRMK RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|190011647|emb|CAQ45266.1| putative alanyl-tRNA synthetase [Stenotrophomonas maltophilia
           K279a]
          Length = 882

 Score = 67.1 bits (162), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/134 (23%), Positives = 60/134 (44%), Gaps = 10/134 (7%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDELAQIEK 124
           + R   ++ HS  H++  A++ +        G  +  D   +DF   QP S++ELA IE+
Sbjct: 562 ERRGATILNHSATHLLHAALREVLGSHVQQKGSLVAPDRLRFDFSHFQPISAEELAVIER 621

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLC 183
           K+ + +  ++      +  ++A +         K          E+V + + G++  +LC
Sbjct: 622 KVNQQVRANNAAEVHNMGMQEALDFGAMALFGEKY--------GEHVRVLKMGDYSTELC 673

Query: 184 RGPHVRSTGQVKKF 197
            G HV  TG +  F
Sbjct: 674 GGTHVNRTGDIGLF 687


>gi|51893560|ref|YP_076251.1| histidyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
 gi|81692042|sp|Q67LN9|SYH_SYMTH RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|51857249|dbj|BAD41407.1| histidyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
          Length = 432

 Score = 67.1 bits (162), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 66/417 (15%), Positives = 129/417 (30%), Gaps = 62/417 (14%)

Query: 276 FQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDS--YRANMFAVKCADDTIKDLR 332
           +Q L    R   +   Y+E+  P V    L+       +      MF +    D   D R
Sbjct: 26  WQRLEEIFREVARLYGYQELRPPMVEYVDLFIHGVGATTDIVTKEMFNITPRGDDP-DAR 84

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE--PSGSLHGLMRVRGFTQDD 390
             A++P    G V  +          P ++  +G  +R E    G      R RGF Q D
Sbjct: 85  RMAMRPEFTAGLVRAWLENGLYNNPQPTKIFAYGPAFRYENVQKG------RFRGFHQLD 138

Query: 391 AHVFCTKEQMFNECLKIHNLIISIYKDFGFE------KIMVKLSTRPEKRVGSDALWDDA 444
             VF  ++   +   ++  L + +    G          +     RP  R    AL D  
Sbjct: 139 VEVFGAQDPAVDA--EVIKLGLDVVARLGLTGLVVSVNSIGCPQCRPRYRQ---ALQDHF 193

Query: 445 ENIMKGVLDTIKNSSQDRINTGVLLGEGAFY-----GP-KFEYILKDAIGRDWQCGTI-- 496
              +  + +      +      +     A +      P   +Y+  D         +   
Sbjct: 194 RPHLGELCEDCNTRFEKNPLRLLDCKRDADHPAQRTAPVTLDYLCDDCRRHWEGLLSHLA 253

Query: 497 ------QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-------------------- 530
                 Q+D  +    + +           +    A++G                     
Sbjct: 254 AMGIPYQIDTRIVRGLDYYTKTVFEVLHPKLGAQSALWGGGRYDGLIEIVGGKPTPGVGF 313

Query: 531 ---IERFIGIMIENFKGNLPLWLSPI-QAIVTTITSSAVEYAQEIANLLKSHHLSIETDF 586
              +ER + ++ E      P    P     V T+  +A     ++   L+   LS + D+
Sbjct: 314 GMGMERVLMVL-EEEGLTAPFADRPRLDVFVATLGEAARPVGLKLLYALRDAGLSADIDY 372

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              ++  +++    +    ++I G+ E  +    ++     T + V L   I  L +
Sbjct: 373 LGRSLKAQMKYAGKQNSRYVVILGEDEVRQGVASVKHMDEGTQESVPLDQIISHLRR 429


>gi|294496887|ref|YP_003560587.1| seryl-tRNA synthetase [Bacillus megaterium QM B1551]
 gi|295702254|ref|YP_003595329.1| seryl-tRNA synthetase [Bacillus megaterium DSM 319]
 gi|294346824|gb|ADE67153.1| seryl-tRNA synthetase [Bacillus megaterium QM B1551]
 gi|294799913|gb|ADF36979.1| seryl-tRNA synthetase [Bacillus megaterium DSM 319]
          Length = 425

 Score = 67.1 bits (162), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 39/244 (15%), Positives = 89/244 (36%), Gaps = 22/244 (9%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIF 276
           G   +   E+ ++    +   E + H  L  ++++          GS  +F+   G ++ 
Sbjct: 115 GETEDDNVEVRKWGEIKQFDFEPKPHWDLGTDLNILDFERASKVTGSRFVFYKGLGARLE 174

Query: 277 QTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           + LI++M     D   YEEI  P ++++     +G    +  + F +K           +
Sbjct: 175 RALINFMMDLHMDEHGYEEILPPYMVNRTSMTGTGQLPKFEEDAFKIK--------EEDY 226

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDA 391
            L P        +    + S  +LP+    + + +R+E   +     GL+R   F + + 
Sbjct: 227 FLIPTAEVPVTNLHRDEILSGDQLPIAYTAYSACFRSEAGSAGRDTRGLIRQHQFNKVEL 286

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENI 447
             F   E  ++E  K+      + +  G    ++ + T              +W  +   
Sbjct: 287 VRFVKPEDSYDELEKLTGHAEKVLQLLGLPYRVLSMCTADLGFTAAKKYDIEVWIPSYET 346

Query: 448 MKGV 451
            + +
Sbjct: 347 YREI 350


>gi|196251172|ref|ZP_03149848.1| seryl-tRNA synthetase [Geobacillus sp. G11MC16]
 gi|196209313|gb|EDY04096.1| seryl-tRNA synthetase [Geobacillus sp. G11MC16]
          Length = 424

 Score = 67.1 bits (162), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 51/352 (14%), Positives = 114/352 (32%), Gaps = 45/352 (12%)

Query: 109 DKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK 168
           DKE+     ++ +++ K  E+  + +   ++    E          +  K          
Sbjct: 35  DKERRRLIAQVEELKSKRNEVSQQIAVLKREKKDAESLIAEMREVGDRIKQ-------MD 87

Query: 169 ENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQ 228
           E +    +     L   P+V          +   V    W             G   +  
Sbjct: 88  EQIRQLEEELDSLLLSIPNVPHESVPVGQSEEDNVEVRRW-------------GEPRSFS 134

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK 288
            E   +    ++    D  + A+           S  +F+   G ++ + LI++M     
Sbjct: 135 FEPKPHWDIADQLGLLDFERAAKVAG--------SRFVFYKGLGARLERALINFMLDIHL 186

Query: 289 D--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA 346
           D   Y+E+  P ++++     +G    +  + F +        D   + L P        
Sbjct: 187 DEFGYQEVLPPYLVNRASMIGTGQLPKFAEDAFHL--------DNEDYFLIPTAEVPVTN 238

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNE 403
           +    + +  +LP+  A + + +R E   +     GL+R   F + +   F   E  ++E
Sbjct: 239 LHRDEILTADDLPLYYAAYSACFRAEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYDE 298

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
             K+ +   +I +  G    +V L T              +W  +    + +
Sbjct: 299 LEKLTHQAETILQRLGLPYRVVALCTGDLGFSAAKTYDIEVWLPSYGTYREI 350


>gi|325265418|ref|ZP_08132142.1| alanine--tRNA ligase [Clostridium sp. D5]
 gi|324029419|gb|EGB90710.1| alanine--tRNA ligase [Clostridium sp. D5]
          Length = 879

 Score = 67.1 bits (162), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/143 (24%), Positives = 60/143 (41%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFS 115
              E+      RSL+   HS  H++ +A++++        G  + ED   +DF      S
Sbjct: 548 DKAELAVDARKRSLSARNHSATHLLQKALRTVLGTHVEQAGSSVNEDRLRFDFTHFSALS 607

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            +EL Q+E  + E IA   P   Q +  E+AR+         K          + V +  
Sbjct: 608 QEELKQVENIVNEHIAEALPVDIQNMPIEEARKTGAQALFGEKY--------GDIVRVVN 659

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G +  + C G HV++T ++  F
Sbjct: 660 MGGFSIEFCGGTHVKNTSEIMAF 682


>gi|187934733|ref|YP_001884277.1| seryl-tRNA synthetase [Clostridium botulinum B str. Eklund 17B]
 gi|238691597|sp|B2THC5|SYS_CLOBB RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|187722886|gb|ACD24107.1| serine--tRNA ligase [Clostridium botulinum B str. Eklund 17B]
          Length = 425

 Score = 67.1 bits (162), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 39/236 (16%), Positives = 88/236 (37%), Gaps = 22/236 (9%)

Query: 220 IYGTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWK 274
             G       E+ ++    + + E + H  L  ++++          GS    +   G +
Sbjct: 115 PDGETDEDNVEIKKWGEPTKFNFEPKAHWDLGTDLNILDFERGGKVAGSRFTVYKGLGAR 174

Query: 275 IFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           + +++I+Y   K   ++ Y EI  P ++++     +G    +  + F V        +  
Sbjct: 175 LERSIINYFLDKHTTENGYTEILPPYMVNRDSMTGTGQLPKFEEDAFKV--------ENN 226

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQD 389
            + L P        ++ + + S   LP++ A + + +R E   +     GL+R   F + 
Sbjct: 227 GYFLIPTAEVPVTNMYRNEVLSGDILPIKHAAYSACFRAEAGSAGRDTRGLVRQHQFNKV 286

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALW 441
           +   FC  E  + E  K+     S+ +  G    +V++                +W
Sbjct: 287 ELVKFCKPEDSYAELDKLVEDAESVLQGLGLPYRIVRICKGDLGFTAALKYDIEVW 342


>gi|325977827|ref|YP_004287543.1| alanyl-tRNA synthetase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|325177755|emb|CBZ47799.1| alaS [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069]
          Length = 872

 Score = 67.1 bits (162), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 40/188 (21%), Positives = 77/188 (40%), Gaps = 21/188 (11%)

Query: 23  GSDVAESISRSLAKKAVAVAI-------NGK---VCDLSDPVREGSIEIITPEDPRSLAV 72
           G  VA+       K  +   +       NG+     D+   +  G+   +  +  R   V
Sbjct: 504 GGQVADHGMIKNDKGDIVARVTDVQKAPNGQALHTVDVLASLSVGTTYTLEIDSKRRHRV 563

Query: 73  I-RHSCAHIMAEAVQSIWPEVQVAIGPIIEDGF-YYDFDKEQPFSSDELAQIEKKMQEII 130
           I  H+  H++  A+ ++  E     G + E+GF  +DF   +  +++EL QIE+++ + I
Sbjct: 564 IKNHTATHLLHAALHNVIGEHATQAGSLNEEGFLRFDFTHFEAVTAEELRQIEEEVNQQI 623

Query: 131 ARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVR 189
               P        + A+ +        K          +NV +   G++  +LC G HV 
Sbjct: 624 WNAIPVKTIETDIDTAKSMGAMALFGEKY--------GKNVRVVTIGDYSIELCGGTHVS 675

Query: 190 STGQVKKF 197
           +T ++  F
Sbjct: 676 NTAEIGIF 683


>gi|295396919|ref|ZP_06807043.1| alanine--tRNA ligase [Aerococcus viridans ATCC 11563]
 gi|294974853|gb|EFG50556.1| alanine--tRNA ligase [Aerococcus viridans ATCC 11563]
          Length = 880

 Score = 67.1 bits (162), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/151 (19%), Positives = 59/151 (39%), Gaps = 10/151 (6%)

Query: 56  EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPF 114
           + +++++            H+  H++ +A++ +  +     G  +  D   +DF      
Sbjct: 550 DQTVQLVVDRRRHHSIEKNHTATHLLHQALKDVLGDHANQAGSLVTADHLRFDFSHFGQV 609

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
           + +ELA++E K+ E IA   P +    S ++AR          K            V + 
Sbjct: 610 TDEELAEMEAKVNEAIAEAFPVVTTVTSIDEARAAGAQALFGEKY--------GSEVRMV 661

Query: 175 RQGEW-FDLCRGPHVRSTGQVKKFFKLMKVA 204
               W  +LC G HV +T ++  F    +  
Sbjct: 662 DINHWSIELCGGTHVGNTAEIGLFKITSESG 692


>gi|212704759|ref|ZP_03312887.1| hypothetical protein DESPIG_02823 [Desulfovibrio piger ATCC 29098]
 gi|212671822|gb|EEB32305.1| hypothetical protein DESPIG_02823 [Desulfovibrio piger ATCC 29098]
          Length = 889

 Score = 67.1 bits (162), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/148 (21%), Positives = 56/148 (37%), Gaps = 14/148 (9%)

Query: 56  EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPF 114
           +  + +   ED R      HSC H++  A++S+        G  +      +DF      
Sbjct: 559 DQEVALSVEEDARMATARNHSCTHLLHAALRSVLGTHVKQAGSLVNSQRLRFDFSHIAAL 618

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
             +ELA +E+++   I  D P   + + H++A           K          + V + 
Sbjct: 619 PPEELAAVERQVNRAIMADYPVCTKEMKHDEAVASVAMALFNEKY--------GDTVRVV 670

Query: 175 RQGE-----WFDLCRGPHVRSTGQVKKF 197
             G+       +LC G H+  TGQ   F
Sbjct: 671 SMGDDAHTESVELCGGTHLSHTGQAGSF 698


>gi|170116654|ref|XP_001889517.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164635519|gb|EDQ99825.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 652

 Score = 67.1 bits (162), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/211 (14%), Positives = 75/211 (35%), Gaps = 30/211 (14%)

Query: 446 NIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSR 505
            +++ +++++      RI   +  G           I+K   GR++Q      D     R
Sbjct: 434 ALIQSLVESMDEPELLRIKGELAQGAA---------IIKSEDGREFQLTP---DVLTVER 481

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK-----------GNLPLWLSPIQ 554
                +     +  P +I       + R +  ++E+              +LP  ++P +
Sbjct: 482 ---KTLKQSIREYTPNVI--EPSFGLGRILYTLLEHSFWSREQDVERGVLSLPPLVAPTK 536

Query: 555 AIVTTIT--SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
            ++  ++         QE+++ L+   +    D  N +I  +   +     P  +     
Sbjct: 537 VLIVPLSARDEFNPLVQEVSSKLRKAGVFSRVDDSNTSIGKRYARNDELGTPFGVTLDFA 596

Query: 613 EASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
               R++ +R   +   +  S+ D I  +T+
Sbjct: 597 SVQNRTMTLRERDTMDQRIGSIDDVIATVTE 627



 Score = 42.1 bits (97), Expect = 0.29,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 53/166 (31%), Gaps = 17/166 (10%)

Query: 335 ALKPMNCPGHVAVFNHGLKSYR-ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
            L+P    GH   F+  L+    ++P   A+ G  +RNE S    GL+RVR FT  +   
Sbjct: 215 YLRPETAQGHFLNFSRLLEFNNGKVPFASAQIGRSFRNEISPR-AGLLRVREFTMAEIEH 273

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
           +   E       + H +   +             ST     VG     +      + +  
Sbjct: 274 YVDPED--KRHERFHEVRDVVLVLLDRHVQEAGSSTTSRLTVG--EAVEKGVIANETLGY 329

Query: 454 TIKNSSQDRINTGVLLGE-----------GAFYGPKFEYILKDAIG 488
            I       +  G+                 +    ++  + +A G
Sbjct: 330 FIARIYLFLLKIGINPERLRFRQHMGNEMAHYATDCWDAEIHNATG 375


>gi|188588464|ref|YP_001919477.1| seryl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43]
 gi|238689621|sp|B2UX54|SYS_CLOBA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|188498745|gb|ACD51881.1| seryl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43]
          Length = 425

 Score = 66.7 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 39/236 (16%), Positives = 88/236 (37%), Gaps = 22/236 (9%)

Query: 220 IYGTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWK 274
             G       E+ ++    + + E + H  L  ++++          GS    +   G +
Sbjct: 115 PDGETDEDNVEIKKWGEPTKFTFEPKAHWDLGTDLNILDFERGGKVAGSRFTVYKGLGAR 174

Query: 275 IFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           + +++I+Y   K   ++ Y EI  P ++++     +G    +  + F V        +  
Sbjct: 175 LERSIINYFLDKHTTENGYTEILPPYMVNRDSMTGTGQLPKFEEDAFKV--------ENN 226

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQD 389
            + L P        ++ + + S   LP++ A + + +R E   +     GL+R   F + 
Sbjct: 227 GYFLIPTAEVPVTNMYRNEVLSGDILPIKHAAYSACFRAEAGSAGRDTRGLVRQHQFNKV 286

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALW 441
           +   FC  E  + E  K+     S+ +  G    +V++                +W
Sbjct: 287 ELVKFCKPEDSYAELDKLVEDAESVLQGLGLPYRIVRICKGDLGFTAALKYDIEVW 342


>gi|306830937|ref|ZP_07464099.1| alanine--tRNA ligase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|304426960|gb|EFM30070.1| alanine--tRNA ligase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
          Length = 888

 Score = 66.7 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 40/188 (21%), Positives = 77/188 (40%), Gaps = 21/188 (11%)

Query: 23  GSDVAESISRSLAKKAVAVAI-------NGK---VCDLSDPVREGSIEIITPEDPRSLAV 72
           G  VA+       K  +   +       NG+     D+   +  G+   +  +  R   V
Sbjct: 520 GGQVADHGMIKNDKGDIVARVTDVQKAPNGQALHTVDVLASLSVGTTYTLEIDSKRRHRV 579

Query: 73  I-RHSCAHIMAEAVQSIWPEVQVAIGPIIEDGF-YYDFDKEQPFSSDELAQIEKKMQEII 130
           I  H+  H++  A+ ++  E     G + E+GF  +DF   +  +++EL QIE+++ + I
Sbjct: 580 IKNHTATHLLHAALHNVIGEHATQAGSLNEEGFLRFDFTHFEAVTAEELRQIEEEVNQQI 639

Query: 131 ARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVR 189
               P        + A+ +        K          +NV +   G++  +LC G HV 
Sbjct: 640 WNAIPVKTIETDIDTAKSMGAMALFGEKY--------GKNVRVVTIGDYSIELCGGTHVS 691

Query: 190 STGQVKKF 197
           +T ++  F
Sbjct: 692 NTAEIGIF 699


>gi|50553074|ref|XP_503947.1| YALI0E14597p [Yarrowia lipolytica]
 gi|49649816|emb|CAG79540.1| YALI0E14597p [Yarrowia lipolytica]
          Length = 656

 Score = 66.7 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 69/213 (32%), Gaps = 28/213 (13%)

Query: 448 MKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF---EYILKDAIGRDWQCGTIQVDFNLPS 504
           +K     ++   + R    +     A    K    E    +  G +     I        
Sbjct: 429 LKKAAKPVEEWFESRTQCELEDLAKALEAGKIVLPEIEGVEVAGTELDKSHI-------- 480

Query: 505 RFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK-------------GNLPLWLS 551
           +     + +H     P +I       I R +  +IE+                + P  ++
Sbjct: 481 KIEKKTITTHVRDYTPNVI--EPSFGIGRILYSLIEHCFWTRPEDASGAKGVLSFPPRIA 538

Query: 552 PIQAIVTTITS--SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIIC 609
           P + +V  ++S      + QE++  L+   +S + D  + +I  +   +     P  I  
Sbjct: 539 PTKVLVVPLSSQKELAPFTQEVSKKLRQARISAKVDDSSASIGKRYARNDEMGTPFGITV 598

Query: 610 GDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
                 + S+ +R   ST   + S+   I  + 
Sbjct: 599 DFDTVKDNSVTLRERDSTRQVRGSIDAVIAAIN 631



 Score = 39.0 bits (89), Expect = 2.6,   Method: Composition-based stats.
 Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 2/63 (3%)

Query: 336 LKPMNCPGHVAVFNHGL-KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           L+P    G    FN  L  +  ++P   A  G  +RNE S    GL+RVR FT  +   F
Sbjct: 216 LRPETAQGQFLNFNKLLDCNNTKMPFASASIGKSFRNEISPR-SGLLRVREFTMAEIEHF 274

Query: 395 CTK 397
              
Sbjct: 275 VDP 277


>gi|332158548|ref|YP_004423827.1| histidyl-tRNA synthetase [Pyrococcus sp. NA2]
 gi|331034011|gb|AEC51823.1| histidyl-tRNA synthetase [Pyrococcus sp. NA2]
          Length = 433

 Score = 66.7 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 71/440 (16%), Positives = 130/440 (29%), Gaps = 86/440 (19%)

Query: 268 WHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADD 326
           +  +     + +   +R   +   ++E+ TP +    L+Q               +    
Sbjct: 11  FLPEEMIKRRWVFERIREVFEAYGFKEVLTPVMEYTKLFQLRS------GEEIVKQLYAF 64

Query: 327 TIKDLRTFALKP-MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE--PSGSLHGL--- 380
             K  R  +L+P M         N    + +  P++     +++R E   SG        
Sbjct: 65  KDKGGRDVSLRPDMTSSVARLYVNSFQNAPK--PIKWYYIANMFRYEEPQSGRYREFWQA 122

Query: 381 --------------------------MRVRGFTQDDAHVFCTKEQMFNECLK-------- 406
                                       +R FT +  +     E      ++        
Sbjct: 123 GVELIGSDKVEADAEVIALFVESYLATGLRDFTVNIGNRILLDEFAKMLGVRDNIGLMRI 182

Query: 407 -------IHNLIISIYKDFGFEKIMVKLSTRPEKRVGS-DALWDDAENI----------- 447
                       I   KDFG +   +          G  D +   AE +           
Sbjct: 183 IDKRDKLTQEEFIKALKDFGLKDNKINKVLELINIKGKPDDVLPLAEELFNSGKSMEEIS 242

Query: 448 ----MKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLP 503
               +  +L+    S   RI+ G+  G   + G  FE I  + +G     G  + D NL 
Sbjct: 243 RLYKLTELLEWYGVSEWIRIDLGIARGFDYYTGIVFEAIAPNELGIGSIGGGGRYD-NLI 301

Query: 504 SRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSS 563
             F             P        G IER I I+ E  K    L + P    V  IT  
Sbjct: 302 EVFG----------GRPTPATGFAIG-IERLIPIL-EWKKLIPKLRVEPD-VFVVPITEE 348

Query: 564 AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRR 623
               A +I   L+   +  E +     +   +   +   + + II G K+     + +R 
Sbjct: 349 VRRIAIDITTRLRRARIKTELELTGRKLRKALDYANRIGVKVTIIVGKKDVERGVVTVRD 408

Query: 624 FGSTTTQKVSLLDAIPILTK 643
             +    +V++ D    + +
Sbjct: 409 METGEQSEVNIQDVEEKVRE 428


>gi|85374371|ref|YP_458433.1| alanyl-tRNA synthetase [Erythrobacter litoralis HTCC2594]
 gi|122544241|sp|Q2N9K5|SYA_ERYLH RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|84787454|gb|ABC63636.1| AlaS, alanyl-tRNA synthetase [Erythrobacter litoralis HTCC2594]
          Length = 887

 Score = 66.7 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 64/153 (41%), Gaps = 1/153 (0%)

Query: 52  DPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDK 110
             ++  ++ +    D R      HS  H++  A+++   E     G  + ED   +DF  
Sbjct: 542 TVLKGDTLHLDVDVDRRDRVRANHSATHLVHAALRNRLGEHVTQKGSLVAEDRLRFDFSH 601

Query: 111 EQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN 170
            +P S D++A IE ++ E I  +     + +S + A +         K      + +   
Sbjct: 602 PKPLSEDDIAAIEAEVNEEIRANETVTTRLMSPDDAVDAGALALFGEKYGEEVRVLSMGR 661

Query: 171 VTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKV 203
            +   +    +LC G HVR+TG ++ F  + + 
Sbjct: 662 RSKEGRNYSVELCGGTHVRATGDIQLFRIISES 694


>gi|254468456|ref|ZP_05081862.1| seryl-tRNA synthetase [beta proteobacterium KB13]
 gi|207087266|gb|EDZ64549.1| seryl-tRNA synthetase [beta proteobacterium KB13]
          Length = 425

 Score = 66.7 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/222 (15%), Positives = 78/222 (35%), Gaps = 17/222 (7%)

Query: 242 EKRDHRKLAREMDL-FHIAEDGSGVIF-WHRK-GWKIFQTLISYMRRKIKD--DYEEINT 296
           E +DH  L   + L F  A   SG  F + +    ++ + +  +M     +   Y E  T
Sbjct: 135 EVKDHVDLGAPLGLDFDTAAKVSGSRFVFMKNDIARLHRAIGQFMIDTHTENHGYTEYYT 194

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +++      +G    +  ++F  +  DD      +  L P +           +   +
Sbjct: 195 PYLVNGDSLLGTGQLPKFGDDLFVTQKNDD-----ESLYLIPTSEVSLTNSVRDEIIDAK 249

Query: 357 ELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
            LP+R+      +R+E         G++R   F + +       E  +    ++ +   +
Sbjct: 250 HLPIRMTAHTPCFRSEAGSYGKDTRGMIRQHQFDKVEMVQITKPELSYEALEEMLSHAEN 309

Query: 414 IYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
           I K       ++ LS+              +W  ++   + +
Sbjct: 310 ILKALDLPYRVMTLSSGDMGFGAAKTYDIEVWLPSQEQYREI 351


>gi|57506111|ref|ZP_00372033.1| alanyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
 gi|57015595|gb|EAL52387.1| alanyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
          Length = 844

 Score = 66.7 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/142 (24%), Positives = 64/142 (45%), Gaps = 9/142 (6%)

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQI 122
            ED R      HS  H++  A++ I        G ++E +   +DF+  +  + +EL +I
Sbjct: 540 DEDKREQIARHHSATHLLHYALRKILGTHIAQAGSLVEFNKLRFDFNHPKALTKEELEKI 599

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E  + E+I+   P L + +S + A++       + K E          V +   GE  +L
Sbjct: 600 ENLVNEMISSSYPALLEEMSLDDAKKSGAIALFSEKYE--------SKVRVLSLGESKEL 651

Query: 183 CRGPHVRSTGQVKKFFKLMKVA 204
           C G HV ++ ++  FF L +  
Sbjct: 652 CGGTHVNNSAEIGSFFILKESG 673


>gi|269836498|ref|YP_003318726.1| glycyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
 gi|269785761|gb|ACZ37904.1| glycyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
          Length = 469

 Score = 66.7 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 51/369 (13%), Positives = 113/369 (30%), Gaps = 57/369 (15%)

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
                V  Q  W +         N+                 L+P         + + L+
Sbjct: 135 NLACPVCGQRDWTEVRQ-----FNLMFRTFLGPVEASGTQAFLRPETAQAIFLDYRNVLQ 189

Query: 354 SYR-ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
           S R ++P  +A+ G  +RNE +   + + R+  F Q +   F   E       +  + + 
Sbjct: 190 SSRVKIPFGIAQIGKAFRNEITPG-NFIFRLLEFEQMEIEYFIRPEGWEPVFEEWLDAMQ 248

Query: 413 SIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEG 472
           + ++  G  +  ++         G D L   ++        T+    +       L G  
Sbjct: 249 AFFRFIGLGEARLRQREH-----GPDELSHYSKR-------TVDFEYEFPFGWKELCGLA 296

Query: 473 AFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
                + ++ L+                   S  +  Y +  + +     +     G   
Sbjct: 297 ----YRTDFDLR--------------RHQEYSGVDLTYFDQATGERFLPHVVEPTMGVER 338

Query: 533 RFIGIMIENFK----------------GNLPLWLSPIQAIVTTI--TSSAVEYAQEIANL 574
             + +M++ +                       ++P +A V  +      V  A E+ +L
Sbjct: 339 LMLALMVDAYHEEDAVDVAGKPYRRVVLRFHPRMAPYKAAVLPLMKKPELVAKANEVWDL 398

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           L+      + D   ++I  + R       P  +        + S+ IR   S    +V +
Sbjct: 399 LRPEFP-TDYDET-QSIGRRYRRQDEIGTPFCVTIDYDTLEDDSVTIRDRDSMEQVRVPI 456

Query: 635 LDAIPILTK 643
            + +P L +
Sbjct: 457 AELVPTLRE 465


>gi|229198530|ref|ZP_04325234.1| Histidyl-tRNA synthetase 2 [Bacillus cereus m1293]
 gi|228585033|gb|EEK43147.1| Histidyl-tRNA synthetase 2 [Bacillus cereus m1293]
          Length = 476

 Score = 66.7 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 75/465 (16%), Positives = 151/465 (32%), Gaps = 64/465 (13%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWK--------IFQTLISY 282
              Y   +   +  +       + L    E+   +     +G +        ++Q +   
Sbjct: 21  HHGYNTLVPTVQTVEAGVFLFLLRLKQFEEEL-NMSIQIPRGTQDILPGTVELWQYIEGQ 79

Query: 283 MRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPM-N 340
            R   +  +Y+EI TP        +          ++   +      +  R+  L+P   
Sbjct: 80  AREICRRYNYKEIRTPIF---EHTELFLRGVGDTTDIVQKEMYSFQDRGERSLTLRPEGT 136

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
            P   +   + +      P +L   G ++R E   +     R R F Q       + +  
Sbjct: 137 APVVRSYVENKMFGDATQPTKLYYIGQMFRYERPQA----GRYRQFVQFGIEAIGSNDPA 192

Query: 401 FNECLKIHNLIISIYKDFGFEKI---MVKLSTRPEKRVGSDALWDDAENIMKG------- 450
            +   ++  L +  Y+  G + I   +  L     ++   DAL    E  +         
Sbjct: 193 IDA--EVIALAVEFYRGMGLKNIKVVLNSLGDAASRQAHRDALIAHFEPRIGEFCSDCQS 250

Query: 451 --------VLDTIKNSSQDRINT-----GVLLGEGAFYGPK-----------FEYILKDA 486
                   +LD  K+ + + + T       L  + A Y  K           FE      
Sbjct: 251 RLEKNPLRILDCKKDRNHELMGTAPSITEYLNEDSAVYYEKVQELLMMMDVPFEKDPNLV 310

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHS--------EKCHPVMIHRAVFGSIERFIGIM 538
            G D+   T+    +    F A    S          E   P M       SIER I  +
Sbjct: 311 RGLDYYQHTVFEIMSEAEGFGAITTLSGGGRYNGLVQEIGGPEMPGIGFAMSIERLIMAL 370

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
            +     LP+    I   V  +   A ++A ++A  L+   LS+E D+ +  +  + +  
Sbjct: 371 -KAENIELPIE-HSIDCYVVALGEKAKDHAAKVAFDLRKAGLSVEKDYLDRKMKAQFKSA 428

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              K   + + G+ E  +  I ++   +   ++V+L      + +
Sbjct: 429 DRLKAKFVAVLGEDELDKGIINLKDMATGEQEEVALDVFASYVAE 473


>gi|307261353|ref|ZP_07543028.1| Seryl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 12
           str. 1096]
 gi|306869084|gb|EFN00886.1| Seryl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 12
           str. 1096]
          Length = 435

 Score = 66.7 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 63/190 (33%), Gaps = 11/190 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK--CADDTI 328
            ++ + L  +M     +   Y E N P +++      +G    +  ++F  +     D  
Sbjct: 171 ARLHRALSQFMLDLHTEQHGYVETNVPFLVNHDTLFGTGQLPKFGEDLFHTQPLTGQDPN 230

Query: 329 KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRG 385
           +  R F+L P        +    +     LP+R       +R+E         GL+R+  
Sbjct: 231 ETQRPFSLIPTAEVPVTNLVRDEIIDEDSLPLRYTAHTPCFRSEAGSYGRDTRGLIRMHQ 290

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALW 441
           F + +       E+      ++      + +  G     V L T              +W
Sbjct: 291 FEKVEMVQIVAPEKSMKALEELTGHAEKVLQLLGLPYRKVLLCTGDMGFGSAKTYDLEVW 350

Query: 442 DDAENIMKGV 451
             A+N  + +
Sbjct: 351 LPAQNTYREI 360


>gi|284047518|ref|YP_003397857.1| seryl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
 gi|283951739|gb|ADB46542.1| seryl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
          Length = 426

 Score = 66.7 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 39/234 (16%), Positives = 82/234 (35%), Gaps = 22/234 (9%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGW--KIF 276
           G       E+ ++        E + H ++  ++ +     A   SG  F++ KG   ++ 
Sbjct: 114 GKDDTENPEVRKWGEPTHFDFEPKAHWEIGEKLGILDAERAAKVSGARFYYYKGAGARLE 173

Query: 277 QTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           + + ++M  +      Y E+  P +++      +G    +  +M+ V        + +  
Sbjct: 174 RAVYNFMLDQHTRKDGYMEVIPPYIVNTASMTGTGQLPKFHEDMYKV--------EGQDM 225

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDA 391
            L P         +   + +  +LP+ L      +R E   +     GL+R   F + + 
Sbjct: 226 YLIPTAEVPLTNYYRGEILNGDDLPIYLTAMTPCFRAEAGSAGRDTRGLIRQHQFHKVEM 285

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALW 441
             FC  E  ++E  K+      I K       +V L T              +W
Sbjct: 286 VKFCKPETSYDELEKLVGNAEDILKALKLPYHVVCLCTGDLGFSAAKCYDVEVW 339


>gi|281425692|ref|ZP_06256605.1| histidine--tRNA ligase [Prevotella oris F0302]
 gi|281400279|gb|EFB31110.1| histidine--tRNA ligase [Prevotella oris F0302]
          Length = 454

 Score = 66.7 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 46/349 (13%), Positives = 113/349 (32%), Gaps = 63/349 (18%)

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
             +   +LP +  +   V+R +         R R F Q DA V  +        +++  +
Sbjct: 113 MHREELQLPFKRYQIQPVWRADRPQK----GRYREFYQCDADVVGSD--SLLNEVELMQI 166

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRVGS--------------------------------D 438
           + +++  FG    +   + +    +                                  D
Sbjct: 167 VDTVFTKFGVRVQIKINNRKILTGIAEVIGEADKIVDITVAIDKLDKIGLDNVNAELKAD 226

Query: 439 ALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK-FE--YILKDAIGRDWQCGT 495
            + D+A   ++ ++ +++ +++D++NT   + EG+  G K  E    + DA+        
Sbjct: 227 GISDEAIEKLQPII-SLEGTNEDKLNTIAKVLEGSDVGLKGVEETKFILDALKTTGLNNE 285

Query: 496 IQVDFNLPSRFNAFYVN-SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPL------ 548
           IQ+D  L    N +       +     M      G  +   GI        + +      
Sbjct: 286 IQLDLTLARGLNYYTGAIFEVKALDTPMGSITGGGRYDNLTGIFGMPGLSGVGISFGADR 345

Query: 549 --------------WLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
                          ++  Q +          Y        +   +  E       +  +
Sbjct: 346 IYDVLNALDLYPKEAVNATQVLFINFGEKETAYCLPFVAKARKAGIRTEIFPDKAKMKKQ 405

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +   + K IP +++ G+ E +E  + ++   +     +++ + I  ++K
Sbjct: 406 MSYANAKNIPYVVLAGENEINEGKLMLKNMQTGEQTLITIDELIATVSK 454


>gi|229071912|ref|ZP_04205123.1| Histidyl-tRNA synthetase 2 [Bacillus cereus F65185]
 gi|228711208|gb|EEL63172.1| Histidyl-tRNA synthetase 2 [Bacillus cereus F65185]
          Length = 423

 Score = 66.7 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 72/416 (17%), Positives = 141/416 (33%), Gaps = 55/416 (13%)

Query: 275 IFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           ++Q +    R   +  +Y+EI TP        +          ++   +      +  R+
Sbjct: 19  LWQYIEGQAREICRRYNYKEIRTPIF---EHTELFLRGVGDTTDIVQKEMYSFQDRGERS 75

Query: 334 FALKPM-NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
             L+P    P   +   + +      P +L   G ++R E   +     R R F Q    
Sbjct: 76  LTLRPEGTAPVVRSYVENKMFGDATQPTKLYYIGQMFRYERPQA----GRYRQFVQFGIE 131

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKI---MVKLSTRPEKRVGSDALWDDAENIMK 449
              + +   +   ++  L +  Y+  G + I   +  L     ++   DAL    E  + 
Sbjct: 132 AIGSNDPAIDA--EVIALAVEFYRGMGLKNIKVVLNSLGDAASRQAHRDALIAHFEPRIG 189

Query: 450 G---------------VLDTIKNSSQDRINT-----GVLLGEGAFYGPK----------- 478
                           +LD  K+ + + + T       L  + A Y  K           
Sbjct: 190 EFCSDCQSRLEKNPLRILDCKKDRNHELMGTAPSITEYLNEDSAVYYDKVQELLTMMDVP 249

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS--------EKCHPVMIHRAVFGS 530
           FE       G D+   T+    +    F A    S          E   P M       S
Sbjct: 250 FEKDPNLVRGLDYYQHTVFEIMSEAEGFGAITTLSGGGRYNGLVQEIGGPEMPGIGFAMS 309

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
           IER I  + +     LPL    I   V  +   A ++A ++A  L+   LS+E D+ +  
Sbjct: 310 IERLIMAL-KAENIELPLE-HSIDCYVVALGEKAKDHAAKVAFDLRKAGLSVEKDYLDRK 367

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           +  + +     K   + + G+ E  +  I ++   +   ++V+L      + ++ +
Sbjct: 368 MKAQFKSADRLKAKFVAVLGEDELDKGIINLKDMATGEQEEVALDVFASYVAEQLI 423


>gi|254505107|ref|ZP_05117258.1| alanyl-tRNA synthetase [Labrenzia alexandrii DFL-11]
 gi|222441178|gb|EEE47857.1| alanyl-tRNA synthetase [Labrenzia alexandrii DFL-11]
          Length = 885

 Score = 66.7 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 39/164 (23%), Positives = 69/164 (42%), Gaps = 10/164 (6%)

Query: 36  KKAVAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVA 95
           KKA  + ++    D      E ++E+    D RS     H+  H++ EA++ +       
Sbjct: 524 KKADGLFVHVVTVDEGTVTPELALELKVDHDRRSAVRSNHTATHLVHEALREVLGTHVAQ 583

Query: 96  IGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE------ 148
            G ++  D   +DF   +P S DELA +E    EII +++    + ++ + A E      
Sbjct: 584 KGSLVSPDRLRFDFSHPKPMSDDELAIVETFANEIILQNASVETRLMAVDDAIEAGAMAL 643

Query: 149 LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTG 192
             E   E  +V  + +    +           +LC G HV+ TG
Sbjct: 644 FGEKYGEEVRVVSMGTALHGDKTGKPY---SLELCGGTHVKRTG 684


>gi|323350735|ref|ZP_08086396.1| histidine--tRNA ligase [Streptococcus sanguinis VMC66]
 gi|322123155|gb|EFX94846.1| histidine--tRNA ligase [Streptococcus sanguinis VMC66]
          Length = 426

 Score = 66.7 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 63/418 (15%), Positives = 132/418 (31%), Gaps = 68/418 (16%)

Query: 269 HRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
             +    +Q +  + R+  +  +Y EI TP       ++          ++   +  D  
Sbjct: 13  LPQESAKWQYVEDFARKTFRKYNYGEIRTPIF---EHYEVISRSVGDTTDIVTKEMYDFY 69

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKS-----YRELPVRLAEFGSVYRNEPSGSLHGLMR 382
            K  R   L+P    G   V    +++       + PV++   GS++R E   +     R
Sbjct: 70  DKGDRHITLRP---EGTAPVVRSYVENKLFAPEVQKPVKVYYMGSMFRYERPQA----GR 122

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD------------FGFEKIMVKLSTR 430
           +R F Q  A  F +        +++  +    +KD             G  +        
Sbjct: 123 LREFHQIGAECFGSSNPA--TDVEMIAMAAQFFKDIGITNVSLELNSLGNPESRAAYRQA 180

Query: 431 PEKRVG------SDALWDDAENIMKGVLDTIKNSSQDRIN-----TGVLLGEGAFYGPKF 479
               +       S       E     VLD+ +   +  +         L  E + Y    
Sbjct: 181 LIDYLTPLKASLSADSQRRLEENPLRVLDSKEPEDKAAVEGAPSILDYLDEESSTYFAAV 240

Query: 480 EYILKD-----------AIGRDWQCGTI----------QVDFNLPSRFNAFYVNSHSEKC 518
             +L+              G D+   TI          Q+      R++         + 
Sbjct: 241 RSMLETLQIPYVINTNMVRGLDYYNHTIFEFTTEVAGSQLTICAGGRYDGLVAYFGGPET 300

Query: 519 HPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSH 578
             V     +    ER + ++  + +G      + +   V  + + A   A E+   L++ 
Sbjct: 301 PGVGFGMGL----ERLLLVL--DKQGVELPIETALDVYVAVLGAGANGRALELVQALRAQ 354

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
             ++E D+ +  +  + +   I K   +I  G+ E     + ++   +     VSL  
Sbjct: 355 GFAVERDYLDRKLKAQFKSADIFKAKTLITLGESEVESGQVTVKNNHNREEITVSLDQ 412


>gi|229083329|ref|ZP_04215689.1| Seryl-tRNA synthetase [Bacillus cereus Rock3-44]
 gi|228699976|gb|EEL52601.1| Seryl-tRNA synthetase [Bacillus cereus Rock3-44]
          Length = 424

 Score = 66.7 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 72/189 (38%), Gaps = 17/189 (8%)

Query: 272 GWKIFQTLISYMRRKIKDD--YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
           G K+ + LIS+M     ++  YEE+  P ++++     +G    +  + F +        
Sbjct: 170 GAKLERALISFMLDLHTEEHEYEEVLPPYMVNRASMTGTGQLPKFEEDAFRI-------- 221

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGF 386
           +   + L P        +    + +  +LP+R A F + +R+E   +     GL+R   F
Sbjct: 222 ESEDYFLIPTAEVPVTNMHRDEILNVDQLPIRYAAFSACFRSEAGSAGRDTRGLIRQHQF 281

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALWD 442
            + +   F   E  + E  K+ N    + +  G    ++ + T              +W 
Sbjct: 282 NKVELVKFVKPEDSYEELEKLTNDAERVLQLLGLPYRVMSMCTGDLGFTAAKKYDIEVWI 341

Query: 443 DAENIMKGV 451
            +    + +
Sbjct: 342 PSYGTYREI 350


>gi|288904885|ref|YP_003430107.1| alanyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
 gi|288731611|emb|CBI13166.1| alanyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
          Length = 872

 Score = 66.7 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 40/188 (21%), Positives = 77/188 (40%), Gaps = 21/188 (11%)

Query: 23  GSDVAESISRSLAKKAVAVAI-------NGK---VCDLSDPVREGSIEIITPEDPRSLAV 72
           G  VA+       K  +   +       NG+     D+   +  G+   +  +  R   V
Sbjct: 504 GGQVADHGVIKNDKGDIVARVTDVQKAPNGQALHTVDVLSSLSVGTTYTLEIDSKRRHRV 563

Query: 73  I-RHSCAHIMAEAVQSIWPEVQVAIGPIIEDGF-YYDFDKEQPFSSDELAQIEKKMQEII 130
           I  H+  H++  A+ ++  E     G + E+GF  +DF   +  +++EL QIE+++ + I
Sbjct: 564 IKNHTATHLLHAALHNVIGEHATQAGSLNEEGFLRFDFTHFEAVTAEELRQIEEEVNQQI 623

Query: 131 ARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVR 189
               P        + A+ +        K          +NV +   G++  +LC G HV 
Sbjct: 624 WNAIPVKTIETDIDTAKSMGAMALFGEKY--------GKNVRVVTIGDYSIELCGGTHVS 675

Query: 190 STGQVKKF 197
           +T ++  F
Sbjct: 676 NTAEIGIF 683


>gi|159039176|ref|YP_001538429.1| seryl-tRNA synthetase [Salinispora arenicola CNS-205]
 gi|157918011|gb|ABV99438.1| seryl-tRNA synthetase [Salinispora arenicola CNS-205]
          Length = 427

 Score = 66.7 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 37/256 (14%), Positives = 86/256 (33%), Gaps = 16/256 (6%)

Query: 208 WRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDL----FHIAEDGS 263
              +        +        + +  +       + RDH +L+R + L      +   GS
Sbjct: 101 RMSELPNLPADDVAPGGKEANRVVKTFGEPPAIEKVRDHVELSRLLGLVDHERGVKLGGS 160

Query: 264 GVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK 322
           G   +   G ++   L++++  + +   YE +  P +L       +G +  +  +++ + 
Sbjct: 161 GFWMYTGLGARLEWALVNWLVDQNVAAGYEFLLPPHLLLDSAGFAAGQFPKFHDDVYHL- 219

Query: 323 CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHG 379
              D     R   L P      +  +   +    +LP+++  +   YR E +GS     G
Sbjct: 220 ---DRQSAPRGQFLLPTAETAILGAYQDEILDTAKLPLKVFAYTPCYRREAAGSHSDERG 276

Query: 380 LMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV----KLSTRPEKRV 435
            +R   F + +   F   EQ       +      + +  G            ++   ++ 
Sbjct: 277 TVRGHQFNKVEIFQFTLPEQADAALEAMVAHAEGLVERLGLHYQRSLLAAGDASAAMRKT 336

Query: 436 GSDALWDDAENIMKGV 451
               +W  +    K V
Sbjct: 337 LDIEVWMPSTGKYKEV 352


>gi|307254703|ref|ZP_07536531.1| Seryl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9
           str. CVJ13261]
 gi|307256921|ref|ZP_07538699.1| Seryl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 10
           str. D13039]
 gi|307259145|ref|ZP_07540875.1| Seryl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 11
           str. 56153]
 gi|306862376|gb|EFM94342.1| Seryl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9
           str. CVJ13261]
 gi|306864655|gb|EFM96560.1| Seryl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 10
           str. D13039]
 gi|306866812|gb|EFM98670.1| Seryl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 11
           str. 56153]
          Length = 435

 Score = 66.7 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 63/190 (33%), Gaps = 11/190 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK--CADDTI 328
            ++ + L  +M     +   Y E N P +++      +G    +  ++F  +     D  
Sbjct: 171 ARLHRALSQFMLDLHTEQHGYVETNVPFLVNHDTLFGTGQLPKFGEDLFHTQPLTGQDPN 230

Query: 329 KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRG 385
           +  R F+L P        +    +     LP+R       +R+E         GL+R+  
Sbjct: 231 ETQRPFSLIPTAEVPVTNLVRDEIIDEDSLPLRYTAHTPCFRSEAGSYGRDTRGLIRMHQ 290

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALW 441
           F + +       E+      ++      + +  G     V L T              +W
Sbjct: 291 FEKVEMVQIVAPEKSMEALEELTGHAEKVLQLLGLPYRKVLLCTGDMGFGSAKTYDLEVW 350

Query: 442 DDAENIMKGV 451
             A+N  + +
Sbjct: 351 LPAQNTYREI 360


>gi|307245732|ref|ZP_07527818.1| Seryl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
 gi|306853434|gb|EFM85653.1| Seryl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
          Length = 435

 Score = 66.7 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 63/190 (33%), Gaps = 11/190 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK--CADDTI 328
            ++ + L  +M     +   Y E N P +++      +G    +  ++F  +     D  
Sbjct: 171 ARLHRALSQFMLDLHTEQHGYVETNVPFLVNHDTLFGTGQLPKFGEDLFHTQPLTGQDPN 230

Query: 329 KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRG 385
           +  R F+L P        +    +     LP+R       +R+E         GL+R+  
Sbjct: 231 ETQRPFSLIPTAEVPVTNLVRDEIIDEDSLPLRYTAHTPCFRSEAGSYGRDTRGLIRMHQ 290

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALW 441
           F + +       E+      ++      + +  G     V L T              +W
Sbjct: 291 FEKVEMVQIVAPEKSMEALEELTGHAEKVLQLLGLPYRKVLLCTGDMGFGSAKTYDLEVW 350

Query: 442 DDAENIMKGV 451
             A+N  + +
Sbjct: 351 LPAQNTYREI 360


>gi|303251272|ref|ZP_07337450.1| seryl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|307252495|ref|ZP_07534391.1| Seryl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|302649814|gb|EFL79992.1| seryl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|306860087|gb|EFM92104.1| Seryl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
          Length = 435

 Score = 66.7 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 63/190 (33%), Gaps = 11/190 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK--CADDTI 328
            ++ + L  +M     +   Y E N P +++      +G    +  ++F  +     D  
Sbjct: 171 ARLHRALSQFMLDLHTEQHGYVETNVPFLVNHDTLFGTGQLPKFGEDLFHTQPLTGQDPN 230

Query: 329 KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRG 385
           +  R F+L P        +    +     LP+R       +R+E         GL+R+  
Sbjct: 231 ETQRPFSLIPTAEVPVTNLVRDEIIDEDSLPLRYTAHTPCFRSEAGSYGRDTRGLIRMHQ 290

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALW 441
           F + +       E+      ++      + +  G     V L T              +W
Sbjct: 291 FEKVEMVQIVAPEKSMEALEELTGHAEKVLQLLGLPYRKVLLCTGDMGFGSAKTYDLEVW 350

Query: 442 DDAENIMKGV 451
             A+N  + +
Sbjct: 351 LPAQNTYREI 360


>gi|229553320|ref|ZP_04442045.1| serine--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
 gi|229313406|gb|EEN79379.1| serine--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
          Length = 427

 Score = 66.7 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 48/337 (14%), Positives = 109/337 (32%), Gaps = 20/337 (5%)

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ-GEWFDL 182
           +++ E+IA D    K  +  E+ +           V       A E +   R+ G+    
Sbjct: 26  EEIDELIALDEKRRKVTVQTEELKAKRNEVSGQIAVMKRNKENADEQIAAMREVGQKISQ 85

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
                     +V        V    +  D     L+    +    +     +  F  +  
Sbjct: 86  LDKELAELNEKVTYIL----VRLPNFPADDVPMSLNE-DDSREEYKWGNIPHFDFQPKHH 140

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQVLD 301
                KL            GS  +++   G ++ + + ++ +    K+ YEEI  P +++
Sbjct: 141 WDIGEKLGILDFERAAKVSGSRFVYYKGAGARLERAVYNFFLDEHQKEGYEEIIPPYLVN 200

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
                 +G +  +    + +        D     + P      V  +   +    +LPV 
Sbjct: 201 NDSMFGTGQFPKFTDATYTIT------NDGEPLTMIPTAEVPLVNYYRGDIMDAAKLPVN 254

Query: 362 LAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
                  +R+E   +     GL+R+  F + +   FC  E  + E   + +    + +  
Sbjct: 255 FTALTPAFRSEAGSAGRDTRGLIRMHQFNKVEMVKFCKPEDSWKELKNLIHDAEDLLRKL 314

Query: 419 GFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
           G    ++ L++              +W  A++  + +
Sbjct: 315 GLPYHVITLASNDASFTSAKTNDLEVWFPAQDRYREI 351


>gi|165976289|ref|YP_001651882.1| seryl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
 gi|190150196|ref|YP_001968721.1| seryl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 7
           str. AP76]
 gi|303252866|ref|ZP_07339025.1| seryl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|307247856|ref|ZP_07529892.1| Seryl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. S1536]
 gi|307250109|ref|ZP_07532071.1| Seryl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 4
           str. M62]
 gi|307263534|ref|ZP_07545149.1| Seryl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 13
           str. N273]
 gi|238687564|sp|B0BPF3|SYS_ACTPJ RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|238692394|sp|B3H1K7|SYS_ACTP7 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|165876390|gb|ABY69438.1| seryl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
 gi|189915327|gb|ACE61579.1| seryl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 7
           str. AP76]
 gi|302648296|gb|EFL78493.1| seryl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|306855658|gb|EFM87825.1| Seryl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. S1536]
 gi|306857840|gb|EFM89934.1| Seryl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 4
           str. M62]
 gi|306871177|gb|EFN02906.1| Seryl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 13
           str. N273]
          Length = 435

 Score = 66.7 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 63/190 (33%), Gaps = 11/190 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK--CADDTI 328
            ++ + L  +M     +   Y E N P +++      +G    +  ++F  +     D  
Sbjct: 171 ARLHRALSQFMLDLHTEQHGYVETNVPFLVNHDTLFGTGQLPKFGEDLFHTQPLTGQDPN 230

Query: 329 KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRG 385
           +  R F+L P        +    +     LP+R       +R+E         GL+R+  
Sbjct: 231 ETQRPFSLIPTAEVPVTNLVRDEIIDEDSLPLRYTAHTPCFRSEAGSYGRDTRGLIRMHQ 290

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALW 441
           F + +       E+      ++      + +  G     V L T              +W
Sbjct: 291 FEKVEMVQIVAPEKSMEALEELTGHAEKVLQLLGLPYRKVLLCTGDMGFGSAKTYDLEVW 350

Query: 442 DDAENIMKGV 451
             A+N  + +
Sbjct: 351 LPAQNTYREI 360


>gi|194365256|ref|YP_002027866.1| alanyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3]
 gi|194348060|gb|ACF51183.1| alanyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3]
          Length = 882

 Score = 66.7 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/134 (23%), Positives = 60/134 (44%), Gaps = 10/134 (7%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDELAQIEK 124
           + R   ++ HS  H++  A++ +        G  +  D   +DF   QP S++ELA IE+
Sbjct: 562 ERRGATILNHSATHLLHAALREVLGTHVQQKGSMVAPDRLRFDFSHFQPISAEELAVIER 621

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLC 183
           K+ + +  ++      +  ++A +         K          E+V + + G++  +LC
Sbjct: 622 KVNQQVRANNAAEVHNMGMQEALDFGAMALFGEKY--------GEHVRVLKMGDYSTELC 673

Query: 184 RGPHVRSTGQVKKF 197
            G HV  TG +  F
Sbjct: 674 GGTHVNRTGDIGLF 687


>gi|313676633|ref|YP_004054629.1| glycyl-tRNA synthetase [Marivirga tractuosa DSM 4126]
 gi|312943331|gb|ADR22521.1| glycyl-tRNA synthetase [Marivirga tractuosa DSM 4126]
          Length = 492

 Score = 66.7 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 51/346 (14%), Positives = 107/346 (30%), Gaps = 53/346 (15%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR-ELPVRLAEFGSVYRNEPS 374
            N+                 L+P    G    F +  K+ R ++P  +A+ G  +RNE  
Sbjct: 171 FNLMFSTQMGSVSDGSGKIYLRPETAQGIFVNFLNVQKTARMKVPFGIAQIGKAFRNEIV 230

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
            +   + R+R F Q +   F    +      K  ++ +  +K  G     ++L       
Sbjct: 231 -ARQFIFRMREFEQMEMQFFVRPGEEMEWYEKWRDMRLKWHKAIGIASEDLRLHEH---- 285

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
                             + + + +   ++             KF +  K+  G   +  
Sbjct: 286 ------------------EKLAHYANAAVDVEY----------KFPFGFKEVEGIHSRTD 317

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI------ENFKGNLP- 547
                    S+    Y +    K +   +     G    F+ +        E  +G+   
Sbjct: 318 FDLKSHQEVSKKKLQYFDPEIGKNYIPYVVETSVGCDRLFLMLFCSAFKNEEVGEGDKIK 377

Query: 548 --------LWLSPIQAIVTTITSSAV--EYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
                     L+P++A +  +T      E  QEI   LK     +       +I  +   
Sbjct: 378 TRTYLKLHPALAPVKAAILPLTKKDGLPEKGQEIYKSLKGAFNVV--YEEAASIGKRYTR 435

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             +   P  I    +   + ++ IR   ST  +++ + +    + K
Sbjct: 436 QDLIGTPFCIAVDHQTLEDETVTIRHRDSTEQERMPVSELESYIMK 481


>gi|296413606|ref|XP_002836501.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295630326|emb|CAZ80692.1| unnamed protein product [Tuber melanosporum]
          Length = 267

 Score = 66.7 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 18/118 (15%), Positives = 45/118 (38%), Gaps = 13/118 (11%)

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSA----------VEYAQEIANLLKSHHLSIETDF 586
           I  +N    LP  ++  Q ++     +A           +  +++A  L    + ++ D 
Sbjct: 2   IHGDNKGLVLPPMVAQYQVVIVPCGLTAKTADEERKRLFQGVKDMATTLSQAGIRVKADT 61

Query: 587 RN-ETINYKIREHSIKKIPIIIICGDKEASERS-IGIRRFGSTTTQKVSLLDAIPILT 642
           R   +  YK  +  +K +P+ +  G K+  ++  + +R   +     + L      + 
Sbjct: 62  RETCSPGYKFNDWELKGVPVRLEFGPKDMEKKQALSVR-RDTGVKAGIPLGGLAEKVQ 118


>gi|52078504|ref|YP_077295.1| seryl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52783868|ref|YP_089697.1| seryl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|319648532|ref|ZP_08002747.1| seryl-tRNA synthetase [Bacillus sp. BT1B_CT2]
 gi|67461715|sp|Q65PL0|SYS_BACLD RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|52001715|gb|AAU21657.1| seryl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52346370|gb|AAU39004.1| SerS [Bacillus licheniformis ATCC 14580]
 gi|317389380|gb|EFV70192.1| seryl-tRNA synthetase [Bacillus sp. BT1B_CT2]
          Length = 425

 Score = 66.7 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 45/354 (12%), Positives = 111/354 (31%), Gaps = 45/354 (12%)

Query: 107 DFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIP 166
           + D ++     ++ +++ K  E+  + +   ++    +   +      E  K        
Sbjct: 33  ELDTKRRELIVKVEELKGKRNEVSQQVAALKREKKDADHLIKEMREVGEDIKKL------ 86

Query: 167 AKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWN 226
             E +          +   P++          +   V    W             G    
Sbjct: 87  -DEELRTVESSLDKIMLSIPNIPHESVPVGETEDDNVEVRKW-------------GELPE 132

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
              E   +    ++ +  D  +  +           S  +F+   G ++ + L ++M   
Sbjct: 133 FSFEPKPHWDIADQLDILDFERAGKVTG--------SRFVFYKGLGARLERALYNFMLDL 184

Query: 287 IKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
             D   Y E+  P ++++     +G    +  + F ++           + L P      
Sbjct: 185 HVDEYGYTEVIPPYMVNRASMTGTGQLPKFEEDAFKIR--------EEDYFLIPTAEVPI 236

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMF 401
             +    + S  ELP+  A F + +R+E   +     GL+R   F + +   F   E  +
Sbjct: 237 TNLHRDEILSADELPINYAAFSACFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSY 296

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENIMKGV 451
            E  K+ N    + +       ++ + T              +W  ++N  + +
Sbjct: 297 EELEKLTNQAEKVLQLLELPYRVMSMCTGDLGFTAAKKYDIEVWIPSQNTYREI 350


>gi|84500806|ref|ZP_00999041.1| alanyl-tRNA synthetase [Oceanicola batsensis HTCC2597]
 gi|84390873|gb|EAQ03291.1| alanyl-tRNA synthetase [Oceanicola batsensis HTCC2597]
          Length = 892

 Score = 66.7 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 59/155 (38%), Gaps = 5/155 (3%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFS 115
            ++ +      R+     HS  H++ EA++    +     G     D   +DF      S
Sbjct: 550 DAVALEVDHGRRATIRANHSATHLLHEALREALGDHVAQRGSLNAPDRLRFDFSHSAALS 609

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYK----VEILESIPAKENV 171
            +ELA+IE+ +   I +++P   + ++ + AR L        K    V ++         
Sbjct: 610 PEELARIERDVNAFIRQNTPVETRIMTPDDARGLGAQALFGEKYGDEVRVVSMGQKATGK 669

Query: 172 TLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGA 206
                    +LC G HV  TG +  F    + A +
Sbjct: 670 GAGGNTYSIELCGGTHVARTGDIGAFALTSETASS 704


>gi|65321770|ref|ZP_00394729.1| COG0124: Histidyl-tRNA synthetase [Bacillus anthracis str. A2012]
 gi|167636503|ref|ZP_02394800.1| histidyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|170688654|ref|ZP_02879859.1| histidyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|177653972|ref|ZP_02936013.1| histidyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190566891|ref|ZP_03019807.1| histidyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|196034468|ref|ZP_03101877.1| histidyl-tRNA synthetase [Bacillus cereus W]
 gi|227817182|ref|YP_002817191.1| histidyl-tRNA synthetase [Bacillus anthracis str. CDC 684]
 gi|228929448|ref|ZP_04092469.1| Histidyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228935724|ref|ZP_04098537.1| Histidyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228948117|ref|ZP_04110401.1| Histidyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|229093474|ref|ZP_04224577.1| Histidyl-tRNA synthetase 2 [Bacillus cereus Rock3-42]
 gi|229123944|ref|ZP_04253136.1| Histidyl-tRNA synthetase 2 [Bacillus cereus 95/8201]
 gi|229604899|ref|YP_002868690.1| histidine--tRNA ligase [Bacillus anthracis str. A0248]
 gi|254684159|ref|ZP_05148019.1| histidyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066]
 gi|254736506|ref|ZP_05194212.1| histidyl-tRNA synthetase [Bacillus anthracis str. Western North
           America USA6153]
 gi|254741544|ref|ZP_05199231.1| histidyl-tRNA synthetase [Bacillus anthracis str. Kruger B]
 gi|254751357|ref|ZP_05203394.1| histidyl-tRNA synthetase [Bacillus anthracis str. Vollum]
 gi|254757689|ref|ZP_05209716.1| histidyl-tRNA synthetase [Bacillus anthracis str. Australia 94]
 gi|167528096|gb|EDR90893.1| histidyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|170667340|gb|EDT18098.1| histidyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|172081027|gb|EDT66105.1| histidyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190561882|gb|EDV15851.1| histidyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|195993010|gb|EDX56969.1| histidyl-tRNA synthetase [Bacillus cereus W]
 gi|227006448|gb|ACP16191.1| histidine--tRNA ligase [Bacillus anthracis str. CDC 684]
 gi|228659246|gb|EEL14894.1| Histidyl-tRNA synthetase 2 [Bacillus cereus 95/8201]
 gi|228689945|gb|EEL43749.1| Histidyl-tRNA synthetase 2 [Bacillus cereus Rock3-42]
 gi|228811475|gb|EEM57812.1| Histidyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|228823962|gb|EEM69781.1| Histidyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228830236|gb|EEM75852.1| Histidyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|229269307|gb|ACQ50944.1| histidine--tRNA ligase [Bacillus anthracis str. A0248]
          Length = 476

 Score = 66.7 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 74/465 (15%), Positives = 151/465 (32%), Gaps = 64/465 (13%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWK--------IFQTLISY 282
              Y   +   +  +       + L    E+   +     +G +        ++Q +   
Sbjct: 21  HHGYNTLVPTVQTVEAGVFLFLLRLKQFEEEL-NMSIQIPRGTQDILPGTVELWQYIEGQ 79

Query: 283 MRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPM-N 340
            R   +  +Y+EI TP        +          ++   +      +  R+  L+P   
Sbjct: 80  AREICRRYNYKEIRTPIF---EHTELFLRGVGDTTDIVQKEMYSFQDRGERSLTLRPEGT 136

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
            P   +   + +      P +L   G ++R E   +     R R F Q       + +  
Sbjct: 137 APVVRSYVENKMFGDATQPTKLYYIGQMFRYERPQA----GRYRQFVQFGIEAIGSNDPA 192

Query: 401 FNECLKIHNLIISIYKDFGFEKI---MVKLSTRPEKRVGSDALWDDAENIMKG------- 450
            +   ++  L +  Y+  G + I   +  L     ++   DAL    E  +         
Sbjct: 193 IDA--EVIALAVEFYRGMGLKNIKVVLNSLGDAASRQAHRDALIAHFEPRIGEFCSDCQS 250

Query: 451 --------VLDTIKNSSQDRINT-----GVLLGEGAFYGPK-----------FEYILKDA 486
                   +LD  K+ + + + T       L  + A Y  K           FE      
Sbjct: 251 RLEKNPLRILDCKKDRNHELMGTAPSITEYLNEDSAVYYDKVQELLTMMDVPFEKDPNLV 310

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHS--------EKCHPVMIHRAVFGSIERFIGIM 538
            G D+   T+    +    F A    S          E   P M       SIER I  +
Sbjct: 311 RGLDYYQHTVFEIMSEAEGFGAITTLSGGGRYNGLVQEIGGPEMPGIGFAMSIERLIMAL 370

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
            +     LP+    I   V  +   A ++A ++A  L+   L++E D+ +  +  + +  
Sbjct: 371 -KAENIELPIE-HSIDCYVVALGEKAKDHAAKVAFDLRKAGLAVEKDYLDRKMKAQFKSA 428

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              K   + + G+ E  +  I ++   +   ++V+L      + +
Sbjct: 429 DRLKAKFVAVLGEDELDKGIINLKDMATGEQEEVALDVFASYVAE 473


>gi|301055912|ref|YP_003794123.1| histidyl-tRNA synthetase [Bacillus anthracis CI]
 gi|300378081|gb|ADK06985.1| histidyl-tRNA synthetase [Bacillus cereus biovar anthracis str. CI]
          Length = 476

 Score = 66.7 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 74/465 (15%), Positives = 151/465 (32%), Gaps = 64/465 (13%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWK--------IFQTLISY 282
              Y   +   +  +       + L    E+   +     +G +        ++Q +   
Sbjct: 21  HHGYNTLVPTVQTVEAGVFLFLLRLKQFEEEL-NMSIQIPRGTQDILPGTVELWQYIEGQ 79

Query: 283 MRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPM-N 340
            R   +  +Y+EI TP        +          ++   +      +  R+  L+P   
Sbjct: 80  AREICRRYNYKEIRTPIF---EHTELFLRGVGDTTDIVQKEMYSFQDRGERSLTLRPEGT 136

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
            P   +   + +      P +L   G ++R E   +     R R F Q       + +  
Sbjct: 137 APVVRSYVENKMFGDATQPTKLYYIGQMFRYERPQA----GRYRQFVQFGIEAIGSNDPA 192

Query: 401 FNECLKIHNLIISIYKDFGFEKI---MVKLSTRPEKRVGSDALWDDAENIMKG------- 450
            +   ++  L +  Y+  G + I   +  L     ++   DAL    E  +         
Sbjct: 193 IDA--EVIALAVEFYRGMGLKNIKVVLNSLGDAASRQAYRDALIAHFEPRIGEFCSDCQS 250

Query: 451 --------VLDTIKNSSQDRINT-----GVLLGEGAFYGPK-----------FEYILKDA 486
                   +LD  K+ + + + T       L  + A Y  K           FE      
Sbjct: 251 RLEKNPLRILDCKKDRNHELMGTAPSITEYLNEDSAVYYDKVQELLTMMDVPFEKDPNLV 310

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHS--------EKCHPVMIHRAVFGSIERFIGIM 538
            G D+   T+    +    F A    S          E   P M       SIER I  +
Sbjct: 311 RGLDYYQHTVFEIMSEAEGFGAITTLSGGGRYNGLVQEIGGPEMPGIGFAMSIERLIMAL 370

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
            +     LP+    I   V  +   A ++A ++A  L+   L++E D+ +  +  + +  
Sbjct: 371 -KAENIELPIE-HSIDCYVVALGEKAKDHAAKVAFDLRKAGLTVEKDYLDRKMKAQFKSA 428

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              K   + + G+ E  +  I ++   +   ++V+L      + +
Sbjct: 429 DRLKAKFVAVLGEDELDKGIINLKDMATGEQEEVALDVFASYVAE 473


>gi|294634755|ref|ZP_06713284.1| alanine--tRNA ligase [Edwardsiella tarda ATCC 23685]
 gi|291091814|gb|EFE24375.1| alanine--tRNA ligase [Edwardsiella tarda ATCC 23685]
          Length = 875

 Score = 66.7 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/139 (22%), Positives = 56/139 (40%), Gaps = 10/139 (7%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGF-YYDFDKEQPFSSDELAQIEKKM 126
           R    + HS  H+M  A++S+        G ++ DG+  +DF   +     ++ Q+E+ +
Sbjct: 557 RDRIRLSHSATHLMHAALRSVLGTHVAQKGSLVNDGYLRFDFSHPEAMKPQQIRQVEEIV 616

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRG 185
              I R+ P   Q +  E+A+          K            V +   GE+  +LC G
Sbjct: 617 NAQIRRNLPIETQEMGLEEAKAKGAMALFGEKY--------DAQVRVLSMGEFSTELCGG 668

Query: 186 PHVRSTGQVKKFFKLMKVA 204
            H   TG +  F  + +  
Sbjct: 669 THAERTGDIGLFRIVSESG 687


>gi|148270774|ref|YP_001245234.1| histidyl-tRNA synthetase [Thermotoga petrophila RKU-1]
 gi|166228627|sp|A5IN85|SYH_THEP1 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|147736318|gb|ABQ47658.1| histidyl-tRNA synthetase [Thermotoga petrophila RKU-1]
          Length = 420

 Score = 66.7 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 66/415 (15%), Positives = 132/415 (31%), Gaps = 66/415 (15%)

Query: 276 FQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           ++ +    R   +    EEI TP      L+ +S       +++   +      K  R+ 
Sbjct: 20  WRYVEETFRNVCESAGIEEIRTPIFEQTELFVRS---VGEESDIVQKEMYTFQDKAGRSI 76

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
            L+P      V  F       R    R    G ++R E   S     R+R F Q    + 
Sbjct: 77  TLRPEGTAPVVRAFLENSLIDRGFQQRYYYIGPMFRYEKPQS----GRLRQFHQVGFEII 132

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST---RPEKRVGSDALWDDAENIMKGV 451
            ++    +   ++  L+ +  +  G  K  + L++      ++   +AL +    I+  +
Sbjct: 133 GSESPKAD--FEVIMLVDTFLRKLGLTKYRIHLNSIGCSACRKNYREALKEYYGQILANL 190

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYG---PK------------------------------ 478
            D  K   +  I   +       Y    PK                              
Sbjct: 191 CDDCKRRYETNILRLLDCKVDHEYALNAPKSVDYLCDSCKTHYEKLKEYLNTFEIEYVED 250

Query: 479 ------FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
                  +Y  +       +    Q       R++  +V    E     +      G IE
Sbjct: 251 HTLVRGLDYYTRTVFEVRHEGLGAQNTIAGGGRYDGLFV----ELGGSSVPALGFAGGIE 306

Query: 533 RFIGIM----IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRN 588
           R I  +    IE    N+ L        V T+   A     ++A  L+   LS++ D  +
Sbjct: 307 RIILALKAEEIEIPIKNVHL------VYVVTLGEKAFADGVQLAVELRKKGLSVDVDIMD 360

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             ++ +++          +I GD+E  +  + +R   +    +V    A+  + +
Sbjct: 361 RKLSGQLKHAHRMGSRYAVIIGDEELEKGIVILRDLETGDQVEVDRDFAVDYIAE 415


>gi|229158019|ref|ZP_04286090.1| Histidyl-tRNA synthetase 2 [Bacillus cereus ATCC 4342]
 gi|228625472|gb|EEK82228.1| Histidyl-tRNA synthetase 2 [Bacillus cereus ATCC 4342]
          Length = 476

 Score = 66.7 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 75/465 (16%), Positives = 152/465 (32%), Gaps = 64/465 (13%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWK--------IFQTLISY 282
              Y   +   +  +       + L    E+   +     +G +        ++Q +   
Sbjct: 21  HHGYNTLVPTVQTVEAGVFLFLLRLKQFEEEL-NMSIQIPRGTQDILPGTVELWQYIEGQ 79

Query: 283 MRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPM-N 340
            R   +  +Y+EI TP        +          ++   +      +  R+  L+P   
Sbjct: 80  AREICRRYNYKEIRTPIF---EHTELFLRGVGDTTDIVQKEMYSFQDRGERSLTLRPEGT 136

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
            P   +   + +      P +L   G ++R E   +     R R F Q       + +  
Sbjct: 137 APVVRSYVENKMFGDATQPTKLYYIGQMFRYERPQA----GRYRQFVQFGIEAIGSNDPA 192

Query: 401 FNECLKIHNLIISIYKDFGFEKI---MVKLSTRPEKRVGSDALWDDAENIMKG------- 450
            +   ++  L +  Y+  G + I   +  L     ++   DAL    E  +         
Sbjct: 193 IDA--EVIALAVEFYRGMGLKNIKVVLNSLGDAASRQAHRDALIAHFEPRIGEFCSDCQS 250

Query: 451 --------VLDTIKNSSQDRINT-----GVLLGEGAFYGPK-----------FEYILKDA 486
                   +LD  K+ + + + T       L  + A Y  K           FE      
Sbjct: 251 RLEKNPLRILDCKKDRNHELMGTAPSITEYLNEDSAVYYDKVQELLTMMDVPFEKDPNLV 310

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHS--------EKCHPVMIHRAVFGSIERFIGIM 538
            G D+   T+    +    F A    S          E   P M       SIER I  +
Sbjct: 311 RGLDYYQHTVFEIMSEAEGFGAITTLSGGGRYNGLVQEIGGPEMPGIGFAMSIERLIMAL 370

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
            +     LP+    I   V  +   A ++A ++A  L+   LS+E D+ +  +  + +  
Sbjct: 371 -KAENIELPIE-HSIDCYVVALGEKAKDHAAKVAFDLRKAGLSVEKDYLDRKMKAQFKSA 428

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              K   + + G+ E  +  I ++   ++  ++V+L      + +
Sbjct: 429 DRLKAKFVAVLGEDELDKGIINLKDMATSEQEEVALDVFASYVAE 473


>gi|312110102|ref|YP_003988418.1| histidyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
 gi|311215203|gb|ADP73807.1| histidyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
          Length = 423

 Score = 66.7 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 65/422 (15%), Positives = 137/422 (32%), Gaps = 61/422 (14%)

Query: 269 HRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
                + +Q +    R   +  +Y EI TP        +          ++   +     
Sbjct: 13  LPGETEKWQYVEKIARDICRRYNYREIRTPIF---EHTELFLRGVGDTTDIVQKEMYTFE 69

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYR----ELPVRLAEFGSVYRNEPSGSLHGLMRV 383
            +  R+  L+P    G   V    +++        P++L   G ++R E   +     R 
Sbjct: 70  DRGGRSITLRP---EGTAPVVRSFVENKMYGDPNQPIKLYYIGPMFRYERPQA----GRF 122

Query: 384 RGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM--------------VKLST 429
           R F Q       + +   +   ++  + + +Y+  G +K+                + + 
Sbjct: 123 RQFVQFGVEALGSDDPAIDA--EVIAMAMELYQSLGLKKVRLVINSLGDIESRKAHRQAL 180

Query: 430 RPEKRVGSDALWDDAENIMKG----VLDTIKNSSQDRINTG-----VLLGEGAFYGPK-- 478
               +       +D +  +K     +LD  K+   + + T       L  E + Y  K  
Sbjct: 181 IDHFQNRIHEFCEDCQVRLKKNPLRILDCKKDRDHELMATAPSILDYLNEESSRYFEKVK 240

Query: 479 ---------FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS--------EKCHPV 521
                    FE   +   G D+   T     +    F A               E   P 
Sbjct: 241 SYLAKLGIPFEVDARLVRGLDYYNHTTFEIMSDAEGFGAITTLCGGGRYNGLVQEIGGPE 300

Query: 522 MIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLS 581
                   SIER +  +  + +G        I   V  I   A E + ++ + L+   ++
Sbjct: 301 APGIGFALSIERLLAAL--DAEGVALPVQRGIDCYVVAIGEKAKEESVQLVHELRKAGIA 358

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            + D+++  I  +++         + I G+ E ++  I I+  G+    +V L   +  L
Sbjct: 359 ADKDYQDRKIKAQLKAADRLNAKFVAILGEDELAKEVINIKEMGTGEQTEVPLPSVVDYL 418

Query: 642 TK 643
            +
Sbjct: 419 KE 420


>gi|254507377|ref|ZP_05119512.1| alanyl-tRNA synthetase [Vibrio parahaemolyticus 16]
 gi|219549633|gb|EED26623.1| alanyl-tRNA synthetase [Vibrio parahaemolyticus 16]
          Length = 860

 Score = 66.7 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 58/143 (40%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFS 115
             +E I   + R+   + HS  H++  A++ +  E     G +++     +DF   +  +
Sbjct: 545 DEVEAIVDAERRASISLNHSATHLLHAALRQVLGEHVTQKGSLVKPENLRFDFSHLEAVT 604

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
             EL ++E+ +   + R+       +  E A++         K          + V +  
Sbjct: 605 PTELKEVERLVNAQVRRNHVIETNVMDIESAKQKGAMALFGEKY--------DDEVRVLS 656

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            GE+  +LC G H  +TG +  F
Sbjct: 657 MGEFSTELCGGIHASNTGDIGLF 679


>gi|110801909|ref|YP_697363.1| seryl-tRNA synthetase [Clostridium perfringens SM101]
 gi|122956934|sp|Q0SWW9|SYS_CLOPS RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|110682410|gb|ABG85780.1| serine--tRNA ligase [Clostridium perfringens SM101]
          Length = 425

 Score = 66.7 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 50/336 (14%), Positives = 111/336 (33%), Gaps = 40/336 (11%)

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKE-NVTLY 174
            +E  +I   ++ +  + +    +    +KA E       A   EI + I A +  V   
Sbjct: 37  DEERRKILVDVEALKKQRNEVSAEIPKRKKAGEDVTEV-MAEMREIGDKIKADDAKVAEL 95

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
                + + R P++ +    +       V    W             G       E   +
Sbjct: 96  NDKINYIMLRIPNIPNPAVPEGETDEDNVEIKRW-------------GEPTKFNFEPKAH 142

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI--KDDYE 292
                + +  D  +  +          G         G ++ +++I+Y   K   ++ Y 
Sbjct: 143 WDLGTDLDLLDFERGGKIAGSRFTVYKGM--------GARLERSIINYFLDKHTFENGYT 194

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P ++++     +G    +  + F V        +   + L P        ++ +  
Sbjct: 195 EVLPPYMVNRDSMTGTGQLPKFEEDAFKV--------ENNGYFLIPTAEVPVTNMYRNET 246

Query: 353 KSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
               +LP++ A + + +R E   +     GL+R   F + +   FC  EQ + E  K+  
Sbjct: 247 LEGDKLPIKHAAYSACFRAEAGSAGRDTRGLIRQHQFNKVELVKFCKPEQSYEELDKLVQ 306

Query: 410 LIISIYKDFGFEKIMVKLSTRPEKRV----GSDALW 441
              S+ +  G    +V++                +W
Sbjct: 307 DAESVLQGLGLPYRIVRICKGDLGFTAALKYDIEVW 342


>gi|304383920|ref|ZP_07366377.1| glycyl-tRNA synthetase beta subunit [Prevotella marshii DSM 16973]
 gi|304334998|gb|EFM01271.1| glycyl-tRNA synthetase beta subunit [Prevotella marshii DSM 16973]
          Length = 585

 Score = 66.7 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 50/348 (14%), Positives = 107/348 (30%), Gaps = 55/348 (15%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+                 L+P    G    + +  K+   ++P  +A+ G  +RNE  
Sbjct: 267 FNLMFSTEMGSLSDATNKIYLRPETAQGIFVNYLNVQKTGRMKVPFGIAQIGKAFRNEIV 326

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
            +   + R+R F Q +   F     E  + E  K   +       FG E        +  
Sbjct: 327 -ARQFIFRMREFEQMEMQFFVKPGTELEWFETWKKTRMKWHQTLGFGAENYRFHDHEKLA 385

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
                                   +  + R+  G    EG      F+            
Sbjct: 386 HYAN------------------AASDIEFRMPFGFKEVEGIHSRTNFD------------ 415

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK--------- 543
              +        +   ++    +E   P +I  ++ G    F+ +M   ++         
Sbjct: 416 ---LSQHEKFSGKNIKYFDPQTNESYTPYVIETSI-GVDRMFLSVMCHAYEEEQLQSGDT 471

Query: 544 ---GNLPLWLSPIQAIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
                LP  L+P++  V  +       E A+EI + L+    +   D ++  I  + R  
Sbjct: 472 RTVLKLPAPLAPVKLAVMPLVKKDGLPEKAREIVDALR-FKFNTHYDEKDA-IGKRYRRQ 529

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
                P  +        +  + +R   +   ++V + D +  + ++ +
Sbjct: 530 DAIGTPYCVTIDHNTLQDNCVTLRFRDTMEQERVGI-DRLESIIEDKV 576


>gi|260460847|ref|ZP_05809097.1| alanyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075]
 gi|259033424|gb|EEW34685.1| alanyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075]
          Length = 888

 Score = 66.7 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/140 (21%), Positives = 57/140 (40%), Gaps = 4/140 (2%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFS 115
            ++E+      RS     HS  H++ EA++ +        G  +  +   +D    +P S
Sbjct: 546 AAVELKVDHARRSRLRANHSATHLIHEALREVLGTHVAQKGSLVAPERLRFDISHNKPIS 605

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKAREL--FESKKEAYKVEILESIPAKENVTL 173
            ++L ++E+   EI+ ++ P   + +S + A          E Y  E+            
Sbjct: 606 PEDLEEVERMANEIVVQNGPVTTRLISVDDAIAEGAMALFGEKYGDEVRVVSMGTGVHGA 665

Query: 174 YRQGEW-FDLCRGPHVRSTG 192
                +  +LC G HVR+TG
Sbjct: 666 KANRPYSVELCGGTHVRATG 685


>gi|161485645|ref|NP_560930.2| seryl-tRNA synthetase [Clostridium perfringens str. 13]
 gi|168206221|ref|ZP_02632226.1| seryl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
 gi|168210470|ref|ZP_02636095.1| seryl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626]
 gi|168214044|ref|ZP_02639669.1| seryl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
 gi|168217726|ref|ZP_02643351.1| seryl-tRNA synthetase [Clostridium perfringens NCTC 8239]
 gi|169343428|ref|ZP_02864431.1| seryl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
 gi|182625424|ref|ZP_02953197.1| seryl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
 gi|30173188|sp|Q8XPE9|SYS_CLOPE RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|169298514|gb|EDS80600.1| seryl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
 gi|170662379|gb|EDT15062.1| seryl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
 gi|170711415|gb|EDT23597.1| seryl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626]
 gi|170714531|gb|EDT26713.1| seryl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
 gi|177909421|gb|EDT71873.1| seryl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
 gi|182380223|gb|EDT77702.1| seryl-tRNA synthetase [Clostridium perfringens NCTC 8239]
          Length = 425

 Score = 66.7 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 50/336 (14%), Positives = 111/336 (33%), Gaps = 40/336 (11%)

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKE-NVTLY 174
            +E  +I   ++ +  + +    +    +KA E       A   EI + I A +  V   
Sbjct: 37  DEERRKILVDVEALKKQRNEVSAEIPKRKKAGEDVTEV-MAEMREIGDKIKADDAKVAEL 95

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
                + + R P++ +    +       V    W             G       E   +
Sbjct: 96  NDKINYIMLRIPNIPNPAVPEGETDEDNVEIKRW-------------GEPTKFNFEPKAH 142

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI--KDDYE 292
                + +  D  +  +          G         G ++ +++I+Y   K   ++ Y 
Sbjct: 143 WDLGTDLDLLDFERGGKVAGSRFTVYKGM--------GARLERSIINYFLDKHTFENGYT 194

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P ++++     +G    +  + F V        +   + L P        ++ +  
Sbjct: 195 EVLPPYMVNRDSMTGTGQLPKFEEDAFKV--------ENNGYFLIPTAEVPVTNMYRNET 246

Query: 353 KSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
               +LP++ A + + +R E   +     GL+R   F + +   FC  EQ + E  K+  
Sbjct: 247 LEGDKLPIKHAAYSACFRAEAGSAGRDTRGLIRQHQFNKVELVKFCKPEQSYEELDKLVQ 306

Query: 410 LIISIYKDFGFEKIMVKLSTRPEKRV----GSDALW 441
              S+ +  G    +V++                +W
Sbjct: 307 DAESVLQGLGLPYRIVRICKGDLGFTAALKYDIEVW 342


>gi|18143671|dbj|BAB79720.1| serine-tRNA ligase [Clostridium perfringens str. 13]
          Length = 427

 Score = 66.7 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 50/336 (14%), Positives = 111/336 (33%), Gaps = 40/336 (11%)

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKE-NVTLY 174
            +E  +I   ++ +  + +    +    +KA E       A   EI + I A +  V   
Sbjct: 39  DEERRKILVDVEALKKQRNEVSAEIPKRKKAGEDVTEV-MAEMREIGDKIKADDAKVAEL 97

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
                + + R P++ +    +       V    W             G       E   +
Sbjct: 98  NDKINYIMLRIPNIPNPAVPEGETDEDNVEIKRW-------------GEPTKFNFEPKAH 144

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI--KDDYE 292
                + +  D  +  +          G         G ++ +++I+Y   K   ++ Y 
Sbjct: 145 WDLGTDLDLLDFERGGKVAGSRFTVYKGM--------GARLERSIINYFLDKHTFENGYT 196

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P ++++     +G    +  + F V        +   + L P        ++ +  
Sbjct: 197 EVLPPYMVNRDSMTGTGQLPKFEEDAFKV--------ENNGYFLIPTAEVPVTNMYRNET 248

Query: 353 KSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
               +LP++ A + + +R E   +     GL+R   F + +   FC  EQ + E  K+  
Sbjct: 249 LEGDKLPIKHAAYSACFRAEAGSAGRDTRGLIRQHQFNKVELVKFCKPEQSYEELDKLVQ 308

Query: 410 LIISIYKDFGFEKIMVKLSTRPEKRV----GSDALW 441
              S+ +  G    +V++                +W
Sbjct: 309 DAESVLQGLGLPYRIVRICKGDLGFTAALKYDIEVW 344


>gi|323496144|ref|ZP_08101204.1| alanyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
 gi|323318888|gb|EGA71839.1| alanyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
          Length = 860

 Score = 66.7 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 57/143 (39%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFS 115
             +E +   + R+   + HS  H++  A++ +  E     G +++     +DF   +  +
Sbjct: 545 DDVEAVVDAERRAAISLNHSATHLLHAALRKVLGEHVTQKGSLVKPENLRFDFSHLEAVT 604

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
             EL ++E+ +   +  +       +  E A++         K          + V +  
Sbjct: 605 PAELKEVERLVNAQVRHNHVIETNVMDIESAKQKGAMALFGEKY--------DDEVRVLS 656

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            GE+  +LC G H  +TG +  F
Sbjct: 657 MGEFSTELCGGIHASNTGDIGLF 679


>gi|237748955|ref|ZP_04579435.1| seryl-tRNA synthetase [Oxalobacter formigenes OXCC13]
 gi|229380317|gb|EEO30408.1| seryl-tRNA synthetase [Oxalobacter formigenes OXCC13]
          Length = 436

 Score = 66.7 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 39/222 (17%), Positives = 77/222 (34%), Gaps = 13/222 (5%)

Query: 242 EKRDHRKLAREMDL-FHIAEDGSGVIFWHRKG--WKIFQTLISYMRRKI--KDDYEEINT 296
           E +DH  +   + L F  A   +G  F   +G   ++ + L  +M      +  Y E  T
Sbjct: 135 EVKDHVDVGTPLGLDFETATKLTGARFCLMRGNMARLHRALAQFMLDLQTTEHGYTECYT 194

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P + +      +G    +  ++FA +       +     L P             + S  
Sbjct: 195 PYMANADSLYGTGQLPKFAEDLFAARKGGQE-GEGENLYLIPTAEVTLTNTVRGEILSAE 253

Query: 357 ELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           +LPV+L      +R+E         G++R   F + +       E+ +    ++      
Sbjct: 254 QLPVKLTAHTPCFRSEAGSYGRDTRGMIRQHQFDKVEMVQVVHPEKSYEALEEMVKNAGR 313

Query: 414 IYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
           + +  G    +V LST              +W  A+N  + +
Sbjct: 314 VLEKLGLPYRVVSLSTGDMGFSAAKTYDLEVWLPAQNTYREI 355


>gi|206577361|ref|YP_002239454.1| seryl-tRNA synthetase [Klebsiella pneumoniae 342]
 gi|238065104|sp|B5XY99|SYS_KLEP3 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|206566419|gb|ACI08195.1| seryl-tRNA synthetase [Klebsiella pneumoniae 342]
          Length = 430

 Score = 66.7 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 64/188 (34%), Gaps = 10/188 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M     +   Y E   P +++Q     +G    +  ++F  +  ++   D
Sbjct: 170 ARLHRALAQFMLDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLFHTRPLEEEA-D 228

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
              +AL P        +    +    +LP+++      +R+E         GL+R+  F 
Sbjct: 229 SSNYALIPTAEVPLTNLVRDEIIDEDDLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFD 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E       ++      + +  G     V L T              +W  
Sbjct: 289 KVEMVQIVRPEDSMVALEEMTGHAEKVLQLLGLPYRKVALCTGDMGFSACKTYDLEVWVP 348

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 349 AQNTYREI 356


>gi|317128223|ref|YP_004094505.1| histidyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
 gi|315473171|gb|ADU29774.1| histidyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
          Length = 423

 Score = 66.7 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 62/411 (15%), Positives = 143/411 (34%), Gaps = 55/411 (13%)

Query: 276 FQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           +Q +        +  +Y+EI TP      ++ +         ++   +      +  R+ 
Sbjct: 20  WQYIEQRAHELCRTYNYKEIRTPMFEQTEVFARG---VGDTTDIVQKEMYTFDDRGGRSL 76

Query: 335 ALKPMNCPGHVAVF-NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
            L+P      V  +  + +    + PV+L   G ++R E   S     R+R F Q     
Sbjct: 77  TLRPEGTASVVRSYVENKMHGLPDQPVKLYYIGPMFRYERPQS----GRMRQFVQFGVEA 132

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEK--------------IMVKLSTRPEKRVGSDA 439
             + +   +   ++  L + +YK  G                    + +     +   + 
Sbjct: 133 LGSDDPAIDA--EVIALAMDLYKGLGLTDLKLVINSLGDKDSRTAHRNALIDHFKPRIEE 190

Query: 440 LWDDAENIMKG----VLDTIKNSSQDRINTG------VLLGEGAFY--------GPKFEY 481
              D +  ++     +LD  K+   + ++T       +     A++            E+
Sbjct: 191 FCSDCQARLEKNPLRILDCKKDHGHELMDTAPSILDYLNESSKAYFEQVQRYLTAIGIEF 250

Query: 482 ILKDAI--GRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIH---RAVFG-----SI 531
           ++   +  G D+   T          F A    S   + + ++       V G     SI
Sbjct: 251 VVDATLVRGLDYYNNTAFEIMIDGKGFGAITTLSGGGRYNGLVEEFGGSDVPGIGFALSI 310

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           ER +  + E     LP+    I A +  +       A ++ + L+   L+++TD+ N+ +
Sbjct: 311 ERLLMAL-EAQGIELPIQ-EGIDAYLVVMGEEPKNVAPKLLHDLRKQGLTVDTDYLNKKM 368

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             + +          II G++E    S+ ++   +   ++V + + +  L 
Sbjct: 369 KAQFKAADRLNASFAIILGEQELENDSVMVKALSTGEQEEVKVQELVSYLK 419


>gi|113955389|ref|YP_729468.1| histidyl-tRNA synthetase [Synechococcus sp. CC9311]
 gi|123328026|sp|Q0IDK4|SYH_SYNS3 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|113882740|gb|ABI47698.1| histidyl-tRNA synthetase [Synechococcus sp. CC9311]
          Length = 428

 Score = 66.7 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 67/439 (15%), Positives = 132/439 (30%), Gaps = 86/439 (19%)

Query: 269 HRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQ--QSGHWDSYRANMFAVKCAD 325
             +  + +Q + S  R   +    +EI TP +    L+        D     M+      
Sbjct: 14  LPEQTRRWQAVESVAREHFRCAGLDEIRTPLLEFTDLFARGIGEGTDVVGKEMYTFLDRG 73

Query: 326 DTIKDLRTFALKPM-NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVR 384
           D     R+  L+P        A   HGL S      RL   G ++R E   +     R R
Sbjct: 74  D-----RSCTLRPEGTASVVRAALQHGLLSQGA--QRLWYGGPMFRYERPQA----GRQR 122

Query: 385 GFTQD----------------------------------DAHVFCTKEQMFNECLKIHNL 410
            F Q                                   + +   T +       ++   
Sbjct: 123 QFHQIGVEFLGASSPRSDAEVIALAWDLLTDLGIQGLNLEINSLGTPDDRQRFRSELVQW 182

Query: 411 IISIYKDFGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGVLDTIKNSSQ------ 460
           +    +    E      +        K  G+  L +DA  ++K +     +  +      
Sbjct: 183 LEERVEQLDAESQARLTTNPLRILDSKDKGTQQLLNDAPTLLKALSKESVDRFEQVCALL 242

Query: 461 ------DRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH 514
                  ++N  ++ G   +    FE    D +G                R++   +   
Sbjct: 243 TALQIPYQLNPRLVRGLDYYGHTAFEIT-SDQLGAQATVCG-------GGRYDGL-IQQL 293

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMI-------ENFKGNLPLWLSPIQAIVTTITSSAVEY 567
                P +        +ER + ++        +     L    SP+   V      A   
Sbjct: 294 GGPVTPAIGWAL---GMERLLLVISAAAQADPDGAAARLTATPSPL-VYVINRGEQAEPQ 349

Query: 568 AQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR-RFGS 626
           A  +A   +   L++E D  + +   + +       P  ++ GD+EAS   + ++   G 
Sbjct: 350 ALSLARQWRGAGLAVELDGSSASFGKQFKRADRSGAPWAVVLGDEEASAGQVRLKPLRGE 409

Query: 627 TTTQKVSLLDAIPILTKES 645
              ++++  DA+  L K+ 
Sbjct: 410 GEEKQLTWEDALSYLMKQR 428


>gi|34557266|ref|NP_907081.1| seryl-tRNA synthetase [Wolinella succinogenes DSM 1740]
 gi|46577165|sp|Q7M9J5|SYS_WOLSU RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|34482982|emb|CAE09981.1| SERYL-TRNA SYNTHETASE [Wolinella succinogenes]
          Length = 428

 Score = 66.7 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 69/193 (35%), Gaps = 13/193 (6%)

Query: 272 GWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G ++ + LISYM        +EE+ TP ++++     +G    +  ++F +    +  + 
Sbjct: 170 GARMSRALISYMLDFNHSRGFEEVVTPVIVNRETLLGTGQLPKFENDLFKISEVIEEEQG 229

Query: 331 LR-----TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMR 382
                     L P        ++   +  + ELP+ L      +R E   +     G++R
Sbjct: 230 GEKGRGHELYLIPTAEVTLTNLYRDEIIPHDELPLLLTAHTPCFRKEAGSAGRDTRGIIR 289

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD---- 438
              F + +       E+      K+ +    +    G    +V+L         S+    
Sbjct: 290 QHQFDKVELVALTKPEESDAIQQKMIDCASDLLSSLGLPHRLVQLCGGDLGFGASNTVDI 349

Query: 439 ALWDDAENIMKGV 451
            +W   +N  + +
Sbjct: 350 EVWLPGQNCYREI 362


>gi|291563232|emb|CBL42048.1| alanyl-tRNA synthetase [butyrate-producing bacterium SS3/4]
          Length = 884

 Score = 66.7 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/142 (22%), Positives = 63/142 (44%), Gaps = 10/142 (7%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSS 116
           ++ +   E+ RSL    HS  H++ +A++++        G  +  D   +DF      S 
Sbjct: 554 TVTLKVNEENRSLIGRNHSATHLLHKALRTVLGTHVEQAGSLVTRDRLRFDFTHFSAMSQ 613

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
           DE+ ++E  + + I    P +   +S E A++         K          + V + R 
Sbjct: 614 DEIKEVENIVNKEIRAALPVVTDVMSLEDAKKTGAMALFGEKY--------GDKVRVVRM 665

Query: 177 GEW-FDLCRGPHVRSTGQVKKF 197
           G++  +LC G HV++T ++  F
Sbjct: 666 GDFSTELCGGTHVKNTSEISCF 687


>gi|260910053|ref|ZP_05916735.1| glycine-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295]
 gi|260635821|gb|EEX53829.1| glycine-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295]
          Length = 513

 Score = 66.7 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 53/346 (15%), Positives = 104/346 (30%), Gaps = 56/346 (16%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+                 L+P    G    + +  K+   ++P  +A+ G  +RNE  
Sbjct: 194 FNLMFSTEMGSLSDAASKIYLRPETAQGIFVNYLNVQKTGRMKVPFGIAQIGKAFRNEIV 253

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
            +   + R+R F Q +   F     E  +    K   +       FG E        +  
Sbjct: 254 -ARQFIFRMREFEQMEMQFFVAPGTELDWFHTWKETRMKWHQALGFGAENYRFHDHEKLA 312

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIG-RDW 491
                                                 +  F+ P   +  K+  G    
Sbjct: 313 HYAN-------------------------------AASDIEFHMP---FGFKEVEGIHSR 338

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK-------- 543
               +        +   ++    +E   P +I  ++ G    F+ +M   F+        
Sbjct: 339 TDFDLSQHEKFSGKSIKYFDPQTNESYTPYVIETSI-GVDRMFLSVMCHAFEEEKLENGE 397

Query: 544 ----GNLPLWLSPIQAIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
                 LP  L+PI+  V  +       E A+EI N LK    +   D ++ TI  + R 
Sbjct: 398 TRTVLKLPAALAPIKLAVMPLVKKDGLPEKAREIVNALK-FKFNTHYDEKD-TIGKRYRR 455

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
                 P  +       ++  + +R   +   ++V++     I+  
Sbjct: 456 QDAIGTPYCVTVDHDTLTDNCVTLRFRDTMQQERVNIDQLENIIED 501


>gi|237752023|ref|ZP_04582503.1| seryl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430]
 gi|229376590|gb|EEO26681.1| seryl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430]
          Length = 425

 Score = 66.7 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 37/246 (15%), Positives = 82/246 (33%), Gaps = 14/246 (5%)

Query: 220 IYGTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWK 274
            +G   +   EL + L   +   + ++H +LA +              S    +   G K
Sbjct: 113 PFGKDESDNVELKKVLEIPQFDFKPKEHWELAEQNGWIDFERGVKLAKSRFSVFMGMGAK 172

Query: 275 IFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCA-DDTIKDLR 332
           + + LI+YM        + E+ TP + +      +G    +  ++F +    D+      
Sbjct: 173 LERALINYMLDFNSARGFSEVGTPVIANAQTLFGTGQLPKFEEDLFKISDFKDEESGKGH 232

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQD 389
              L P        +++  +     LPV L  +   +R E   +     G++R   F + 
Sbjct: 233 ALYLIPTAEATLTNLYSDEILKEDMLPVMLTAYTPCFRKEAGSAGRDTRGIIRQHQFDKV 292

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD----ALWDDAE 445
           +       +       ++      +    G    +V+L         S+     +W   +
Sbjct: 293 ELVALTMPQDSDMMQERMIACASELLVSLGLPHRLVQLCGGDLGFSASNTVDIEVWLPGQ 352

Query: 446 NIMKGV 451
           N  + +
Sbjct: 353 NCYREI 358


>gi|152969482|ref|YP_001334591.1| seryl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
 gi|238893954|ref|YP_002918688.1| seryl-tRNA synthetase [Klebsiella pneumoniae NTUH-K2044]
 gi|166222736|sp|A6T6Z0|SYS_KLEP7 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|150954331|gb|ABR76361.1| seryl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
 gi|238546270|dbj|BAH62621.1| seryl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
          Length = 430

 Score = 66.7 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 64/188 (34%), Gaps = 10/188 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M     +   Y E   P +++Q     +G    +  ++F  +  ++   D
Sbjct: 170 ARLHRALAQFMLDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLFHTRPLEEEA-D 228

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
              +AL P        +    +    +LP+++      +R+E         GL+R+  F 
Sbjct: 229 SSNYALIPTAEVPLTNLVRDEIIDEDDLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFD 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E       ++      + +  G     V L T              +W  
Sbjct: 289 KVEMVQIVRPEDSMAALEEMTGHAEKVLQLLGLPYRKVALCTGDMGFSACKTYDLEVWVP 348

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 349 AQNTYREI 356


>gi|319899070|ref|YP_004159163.1| Alanyl-tRNA synthetase [Bartonella clarridgeiae 73]
 gi|319403034|emb|CBI76589.1| Alanyl-tRNA synthetase [Bartonella clarridgeiae 73]
          Length = 887

 Score = 66.7 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 37/164 (22%), Positives = 70/164 (42%), Gaps = 5/164 (3%)

Query: 45  GKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DG 103
           GKV      + +  +E+I     R      HS  H++ EA++ I        G ++  D 
Sbjct: 535 GKVKSGQAKISDC-VELIIDSGRRRKIRANHSATHLLHEALRRILGPHVAQKGSLVSPDR 593

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKAR--ELFESKKEAYKVEI 161
             +DF   +  SS+EL ++E    +I+ R+S      ++ + A          E Y  E+
Sbjct: 594 LRFDFSHPKSISSEELKRVEDLANDIVLRNSKVTTHLMALDDAIFEGAMALFGEKYGDEV 653

Query: 162 -LESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVA 204
            + S+  +   T  ++    +LC G HV+ TG +     + + +
Sbjct: 654 RVVSMGERCEPTELKKRWSIELCGGTHVQRTGDIGLIHIVAESS 697


>gi|205830260|sp|A5D3F4|SYA_PELTS RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
          Length = 877

 Score = 66.7 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 43/212 (20%), Positives = 85/212 (40%), Gaps = 28/212 (13%)

Query: 12  GSIKNFPVHATGSDVAESISR-SLAKKAVAVAINGKVCDLSDPVRE-----GSIE--IIT 63
           G    F +  T    AES  + S   K  A  +  ++ +++ PV       G +   I+ 
Sbjct: 485 GEEVEFILDVTPF-YAESGGQVSDRGKVTAADLEVEIHEVTKPVENLFVHRGKVVAGILK 543

Query: 64  PED---------PRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQP 113
             D          R+     HS  H++ +A++ +        G ++E     +DF     
Sbjct: 544 EHDTVTARVDPARRAATCRNHSATHLLHKALKEVLGGHVNQAGSLVEPERLRFDFTHYAA 603

Query: 114 FSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTL 173
            + +EL ++E+ +  ++    P      S  +AR++  +     K          E V +
Sbjct: 604 ATPEELQKVEELVNRMVLSALPVEAFETSLAEARKMGAAALFGEKY--------GERVRV 655

Query: 174 YRQGEW-FDLCRGPHVRSTGQVKKFFKLMKVA 204
            + G++  +LC G H+R+T +V  F  L + +
Sbjct: 656 VKMGDFSLELCGGTHLRNTAEVGLFKLLGESS 687


>gi|148657569|ref|YP_001277774.1| seryl-tRNA synthetase [Roseiflexus sp. RS-1]
 gi|166223283|sp|A5UYX1|SYS_ROSS1 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|148569679|gb|ABQ91824.1| seryl-tRNA synthetase [Roseiflexus sp. RS-1]
          Length = 424

 Score = 66.7 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 38/212 (17%), Positives = 73/212 (34%), Gaps = 20/212 (9%)

Query: 242 EKRDHRKLAREMDLFHIAE--DGSGVIFWHRKG--WKIFQTLISYMRR-KIKDDYEEINT 296
             + H +L   +D+         SG  F+  KG   ++ + LI +M     K  Y+E+ T
Sbjct: 135 TPKPHWELGEALDIIDFERGVKLSGSRFYVLKGPGARLQRALIQWMLDLHGKQGYDEVYT 194

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P V+ +     +     +R N++                L P        +    +    
Sbjct: 195 PFVVKEQCMWGARQLPKFRDNLYR--------DVEDDLWLVPTAEVPVTNLHRDEILDAD 246

Query: 357 ELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           +LP+R   +   +R E       + G+ R   F + + ++F   E  ++E  K+      
Sbjct: 247 QLPLRYCAYTPCFRREKMSAGRDVRGIKRGHQFDKVEMYMFVRPETSYDELEKLRADAEE 306

Query: 414 IYKDFGFEKIMVKLSTRP----EKRVGSDALW 441
             +  G      +L T        R     +W
Sbjct: 307 TCRLLGLPFRTKELCTGDLGFAATRTYDIEVW 338


>gi|288936304|ref|YP_003440363.1| seryl-tRNA synthetase [Klebsiella variicola At-22]
 gi|290510641|ref|ZP_06550011.1| seryl-tRNA synthetase [Klebsiella sp. 1_1_55]
 gi|288891013|gb|ADC59331.1| seryl-tRNA synthetase [Klebsiella variicola At-22]
 gi|289777357|gb|EFD85355.1| seryl-tRNA synthetase [Klebsiella sp. 1_1_55]
          Length = 430

 Score = 66.7 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 64/188 (34%), Gaps = 10/188 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M     +   Y E   P +++Q     +G    +  ++F  +  ++   D
Sbjct: 170 ARLHRALAQFMLDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLFHTRPLEEEA-D 228

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
              +AL P        +    +    +LP+++      +R+E         GL+R+  F 
Sbjct: 229 SSNYALIPTAEVPLTNLVRDEIIDEDDLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFD 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E       ++      + +  G     V L T              +W  
Sbjct: 289 KVEMVQIVRPEDSMAALEEMTGHAEKVLQLLGLPYRKVALCTGDMGFSACKTYDLEVWVP 348

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 349 AQNTYREI 356


>gi|325689257|gb|EGD31263.1| histidine--tRNA ligase [Streptococcus sanguinis SK115]
          Length = 426

 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 56/418 (13%), Positives = 126/418 (30%), Gaps = 68/418 (16%)

Query: 269 HRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
             +    +Q +  + R+  +  +Y EI TP       ++          ++   +  D  
Sbjct: 13  LPQESAKWQYVEDFARKTFRKYNYGEIRTPIF---EHYEVISRSVGDTTDIVTKEMYDFY 69

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKS-----YRELPVRLAEFGSVYRNEPSGSLHGLMR 382
            K  R   L+P    G   V    +++       + PV++   GS++R E   +     R
Sbjct: 70  DKGDRHITLRP---EGTAPVVRSYVENKLFAPEVQKPVKVYYMGSMFRYERPQA----GR 122

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD------------FGFEKIMVKLSTR 430
           +R F Q  A  F +        +++  +    +KD             G  +        
Sbjct: 123 LREFHQIGAECFGSSNPA--TDVEMIAMAAQFFKDIGITNVSLELNSLGNPESRAAYRQA 180

Query: 431 PEKRVG------SDALWDDAENIMKGVLDTIKNSSQDRIN------TGVLLGEGAFYGP- 477
               +       S       E     VLD+ +   +  +         +     A++   
Sbjct: 181 LIDYLTPLKASLSADSQRRLEENPLRVLDSKEPEDKVAVEGAPSILDYLDEESSAYFAAV 240

Query: 478 -------------------KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC 518
                                +Y          +    Q+      R++         + 
Sbjct: 241 RSMLETLQIPYVINTNMVRGLDYYNHTIFEFTTEVAGSQLTICAGGRYDGLVAYFGGPET 300

Query: 519 HPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSH 578
             V     +    ER + ++  + +G      + +   V  + + A + A E+   L++ 
Sbjct: 301 PGVGFGMGL----ERLLLVL--DKQGVELPIETALDVYVAVLGAGANDRALELVQALRAQ 354

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
             + E D+ +  +  + +     K   +I  G+ E     + ++   +     VSL  
Sbjct: 355 GFAAERDYLDRKLKAQFKSADSFKAKTLITLGESEVESGQVTVKNNYNREEITVSLDQ 412


>gi|194333565|ref|YP_002015425.1| seryl-tRNA synthetase [Prosthecochloris aestuarii DSM 271]
 gi|238693328|sp|B4S6M3|SYS_PROA2 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|194311383|gb|ACF45778.1| seryl-tRNA synthetase [Prosthecochloris aestuarii DSM 271]
          Length = 431

 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/221 (12%), Positives = 71/221 (32%), Gaps = 21/221 (9%)

Query: 244 RDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRRKIK--DDYEEINTP 297
            +H  L + + +          G+G   +  KG ++ + LI++M  +    + Y E+  P
Sbjct: 142 DNHLDLGKRLGILDFERGAKITGAGFPVYTAKGARLERALINFMLDQHTSVNGYTEVLPP 201

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
             +++   + +G W  +   ++ +        +       P        +    +    +
Sbjct: 202 LFVNRESLRGTGQWPKFADQVYYM--------NEDNLYAIPTAEVPLTNMHRDEILDASD 253

Query: 358 LPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           +P+  A +   +R E         G +RV  F + +   + T    ++   +I +    I
Sbjct: 254 IPLAYAAYTPCFRREAGSYGKDTRGFLRVHQFNKVELVRYATPTTSYDALQEILSHAEGI 313

Query: 415 YKDFGFEKI----MVKLSTRPEKRVGSDALWDDAENIMKGV 451
            +                +    +     +W   E      
Sbjct: 314 LQALKIPYRVLLLCSGDISANATKCYDIEVWAPGEGKFLEA 354


>gi|163846039|ref|YP_001634083.1| seryl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|222523768|ref|YP_002568238.1| seryl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
 gi|189083562|sp|A9WE34|SYS_CHLAA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|254783017|sp|B9LIV1|SYS_CHLSY RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|163667328|gb|ABY33694.1| seryl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|222447647|gb|ACM51913.1| seryl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
          Length = 423

 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/152 (16%), Positives = 60/152 (39%), Gaps = 12/152 (7%)

Query: 272 GWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G ++ + +I ++    ++  Y+E+ TP V+ + +   SG    +R N++          +
Sbjct: 169 GARLQRAVIQWLIDLHLEQGYQEVYTPFVVKESVLWASGQLPKFRDNLYR--------DE 220

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
                L P       +++   +    +LP+    +   +R E       + G+ R   F 
Sbjct: 221 ESGLWLVPTAEVPLTSLYADEILDASQLPIYHVAYTPCFRKEQLSAGRDVRGIKRGHQFD 280

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           + + ++F T +Q +    K+        +  G
Sbjct: 281 KVEMYMFVTPDQSYQALEKLRRDAEECARRLG 312


>gi|324989694|gb|EGC21638.1| histidine--tRNA ligase [Streptococcus sanguinis SK353]
          Length = 426

 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 62/418 (14%), Positives = 129/418 (30%), Gaps = 68/418 (16%)

Query: 269 HRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
             +    +Q +  + R+  +  +Y EI TP       ++          ++   +  D  
Sbjct: 13  LPQESAKWQYVEDFARKTFRKYNYGEIRTPIF---EHYEVISRSVGDTTDIVTKEMYDFY 69

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKS-----YRELPVRLAEFGSVYRNEPSGSLHGLMR 382
            K  R   L+P    G   V    +++       + PV++   GS++R E   +     R
Sbjct: 70  DKGDRHITLRP---EGTAPVVRSYVENKLFAPEVQKPVKVYYMGSMFRYERPQA----GR 122

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD------------FGFEKIMVKLSTR 430
           +R F Q  A  F +        +++  +    +KD             G  +        
Sbjct: 123 LREFHQIGAECFGSNNPA--TDVEMIAMAAQFFKDIGITNVSLELNSLGNPESRAAYRQA 180

Query: 431 PEKRVG------SDALWDDAENIMKGVLDTIKNSSQDRIN-----TGVLLGEGAFYGPKF 479
               +       S       E     VLD+ +   +  +         L  E + Y    
Sbjct: 181 LIDYLTPLKASLSADSQRRLEENPLRVLDSKEPEDKAAVEGAPSILDYLDEESSTYFAAV 240

Query: 480 EYILKD-----------AIGRDWQCGTI----------QVDFNLPSRFNAFYVNSHSEKC 518
             +L+              G D+   TI          Q+      R++         + 
Sbjct: 241 RSMLETLQIPYVINTNMVRGLDYYNHTIFEFTTEVAGSQLTICAGGRYDGLVAYFGGPET 300

Query: 519 HPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSH 578
             V     +    ER + ++  + +G      + +   V  +   A   A E+   L++ 
Sbjct: 301 PGVGFGMGL----ERLLLVL--DKQGVELPIETALDVYVAVLGPGANGRALELVQALRAQ 354

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
             + E D+ +  +  + +     K   +I  G+ E     + ++   +     VSL  
Sbjct: 355 GFAAERDYLDRKLKAQFKSADTFKAKTLITLGESEVESGQVTVKNNHNREEITVSLDQ 412


>gi|291542143|emb|CBL15253.1| alanyl-tRNA synthetase [Ruminococcus bromii L2-63]
          Length = 877

 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 27/144 (18%), Positives = 61/144 (42%), Gaps = 10/144 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY-YDFDKEQPFS 115
             +     E+ R+     H+ AH++  A++ +        G ++ D ++ +DF   +  +
Sbjct: 545 AEVSTAVDEERRADITRNHTAAHLLQSALREVLGNHVQQAGQLVSDDYFRFDFTHFEALT 604

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           + EL +++  + + I    P   Q +  E+A++L        K          + V +  
Sbjct: 605 AKELIEVQNLVNKKILEAIPVTTQEMPIEEAKKLGAMALFGEKY--------GDVVRVVS 656

Query: 176 QGEW-FDLCRGPHVRSTGQVKKFF 198
            G++  + C G HV++T  +  F 
Sbjct: 657 AGDFSVEFCGGTHVKNTANLGLFR 680


>gi|330823695|ref|YP_004386998.1| Seryl-tRNA synthetase [Alicycliphilus denitrificans K601]
 gi|329309067|gb|AEB83482.1| Seryl-tRNA synthetase [Alicycliphilus denitrificans K601]
          Length = 438

 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 38/225 (16%), Positives = 80/225 (35%), Gaps = 15/225 (6%)

Query: 242 EKRDHRKLAREMDL-FHIAEDGSGVIFWHRKG--WKIFQTLISYMRRKI--KDDYEEINT 296
             +DH  L   + L F +    SG  F   KG   ++ + L  +M      +  Y E   
Sbjct: 140 AVKDHVDLGAPLGLDFDMGAKLSGSRFTVMKGPIARLHRALAQFMLDVQTGEHGYTECYV 199

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVK---CADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           P +++    + +G    +  ++FA K      + + D     L P +      +    + 
Sbjct: 200 PYIVNADSLRGTGQLPKFEGDLFAAKKGGQEGEPVPDDAQLYLIPTSEVPLTNIVRDEVL 259

Query: 354 SYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
           +  +LP+RL      +R+E         G++R   F + +       ++ +    ++   
Sbjct: 260 AESDLPIRLTAHSPCFRSEAGSYGRDTRGMIRQHQFDKIEMVQIVHPDKSYEALEEMTRH 319

Query: 411 IISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
             +I +  G    +V L T              +W  A+   + +
Sbjct: 320 AEAILQKLGLPYRVVSLCTGDMGFGSAKTYDLEVWLPAQGTYREI 364


>gi|307596038|ref|YP_003902355.1| glycyl-tRNA synthetase [Vulcanisaeta distributa DSM 14429]
 gi|307551239|gb|ADN51304.1| glycyl-tRNA synthetase [Vulcanisaeta distributa DSM 14429]
          Length = 591

 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 47/262 (17%), Positives = 92/262 (35%), Gaps = 33/262 (12%)

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           +++      +  G         +R  K  G D   +      K V++     +  RI   
Sbjct: 321 VYSERFGWVEVSGHAYRTDYDLSRHAKYSGYDLTVERRLATPKEVIEARVYPNPQRI-RE 379

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDW-QCGTIQVDFNLPSRFNAFYVNSHS----EKCHPV 521
           V   E A         +  AIGR   +    ++     +    + + S      E+   V
Sbjct: 380 VFGNEMA--------KVMQAIGRADPRWLASELASRGKAVIEGYTITSDMVFIKEERRKV 431

Query: 522 MIHRAVFGSIE------RFIGIMIENFKGNL--------PLWLSPIQAIVTTITSSAVEY 567
            I R +   +E      R + + +E+    +        P  ++PI+A+V  I     EY
Sbjct: 432 HIERFIPHDVEPSFGVDRIVYVTLEHAYTEVNGKPLLRLPPDIAPIKAVVLPIIKKQ-EY 490

Query: 568 A---QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRF 624
               + I   L    +    D  + TI  +  ++    +P  I   DK  ++ ++ IR  
Sbjct: 491 VSIGKRIFKELSLAGIRAVYDD-DGTIGSRYAKYDSIGVPFAITIDDKTPADNTVTIRDR 549

Query: 625 GSTTTQKVSLLDAIPILTKESL 646
            +    +V++ + I I+    L
Sbjct: 550 DTKAQVRVNISEVIRIINDAVL 571



 Score = 45.9 bits (107), Expect = 0.021,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 46/128 (35%), Gaps = 6/128 (4%)

Query: 356 RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           R+LP+ +A+ G V RNE S    GL+R+R FTQ +   F   E      L   ++ + I 
Sbjct: 189 RKLPLGIAQIGKVGRNEISPR-QGLIRLREFTQMEIEFFFDPENAKCPYLDELDVKLRII 247

Query: 416 KDFGFEKIMVKLSTRPEKRVGS----DALWDDAENIMKGV-LDTIKNSSQDRINTGVLLG 470
            +      + +      K           W      +  + ++ +      +     L  
Sbjct: 248 PERDVAAGVKEPREFRPKEAVENGVVPNEWMAFFMGLATIYMNELGVPLDHQYFLAKLPE 307

Query: 471 EGAFYGPK 478
           E A Y   
Sbjct: 308 ERAHYSAA 315


>gi|291519140|emb|CBK74361.1| alanyl-tRNA synthetase [Butyrivibrio fibrisolvens 16/4]
          Length = 795

 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/142 (21%), Positives = 61/142 (42%), Gaps = 10/142 (7%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSS 116
            + +    + R+     HS  H+M +A++ +        G   + D   +DF      +S
Sbjct: 466 KVTLTVDAERRARICKNHSATHLMQKALREVLGTHVEQKGSYQDADRTRFDFSHFSAMTS 525

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
           +E+A++EK + + IA         +S ++A++         K          E V + + 
Sbjct: 526 EEIAKVEKMVNDKIAEGLAVTTAIMSIDEAKKSGAMALFGEKY--------GETVRVVKM 577

Query: 177 GEW-FDLCRGPHVRSTGQVKKF 197
           G++  +LC G HV +T ++  F
Sbjct: 578 GDFSVELCGGTHVSNTSEISAF 599


>gi|126440200|ref|YP_001059224.1| histidyl-tRNA synthetase [Burkholderia pseudomallei 668]
 gi|166227952|sp|A3NA53|SYH_BURP6 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|126219693|gb|ABN83199.1| histidine--tRNA ligase [Burkholderia pseudomallei 668]
          Length = 446

 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 57/403 (14%), Positives = 121/403 (30%), Gaps = 69/403 (17%)

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
             Y+ I TP V    L+ +     +           D    +     L+P N    V   
Sbjct: 42  YGYQNIRTPIVEHTQLFTRGIGEVTDIVEKEMYSFVD--ALNGENLTLRPEN-TAAVVRA 98

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD--DAHVFCTKEQMFNECLK 406
                   + P RL   G ++R+E         R R F Q   +A  F   +       +
Sbjct: 99  AIEHNMLYDGPKRLWYLGPMFRHERPQR----GRYRQFHQVGVEALGFAGPDADA----E 150

Query: 407 IHNLIISIYKDFGFE-------------------KIMVKLSTRPEKRVGSDALWDDAENI 447
           I  +   ++ D G                       ++K   +   ++  DA      N 
Sbjct: 151 IIMMCQRLWDDLGLTGIKLEINSLGLAEERAAHRVELIKYLEQHVDKLDDDAQRRLYTNP 210

Query: 448 MK------GVLDTIKNSSQDRINTGVLLGEGAFYGP-------KFEYILKDAIGRDWQCG 494
           ++        L  I  ++   I+    +    F G           + +   + R     
Sbjct: 211 LRVLDTKNPALQEIVRNAPQLIDFLGDVSRAHFDGLQRLLKANNLPFTINPRLVRGLDYY 270

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIH-------RAVFGS-IERFIGIMIENFKGNL 546
            + V   +  +  A    +   +  P++            +   +ER + ++ E      
Sbjct: 271 NLTVFEWVTDKLGAQGTVAAGGRYDPLIEQLGGKPTAACGWAMGVERILELLKEEH---- 326

Query: 547 PLWLSPIQ----AIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY----KIREH 598
              L P Q      V     +A E A  +A  L+   L +      +        +++  
Sbjct: 327 ---LVPEQEGVDVYVVHQGDAAREQAFIVAERLRDTGLDVILHCSADGAGASFKSQMKRA 383

Query: 599 SIKKIPIIIICGDKEASERSIGIR-RFGSTTTQKVSLLDAIPI 640
                   +I G+ E +  ++ ++   G+    + ++  ++P+
Sbjct: 384 DASGAAFAVILGEDEVANGTVSVKPLRGTGAEGEKNVQQSVPV 426


>gi|163746280|ref|ZP_02153638.1| alanyl-tRNA synthetase [Oceanibulbus indolifex HEL-45]
 gi|161380165|gb|EDQ04576.1| alanyl-tRNA synthetase [Oceanibulbus indolifex HEL-45]
          Length = 885

 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 67/155 (43%), Gaps = 9/155 (5%)

Query: 53  PVREGSIEIITPEDPRSLAVI-RHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDK 110
            V+ G   ++  +  R  A+   HS  H++ EA+++   +     G     D   +DF  
Sbjct: 540 EVKPGQSAVLEVDRARRSAIRANHSATHLLHEALRNALGDHVSQRGSLNAHDRLRFDFSH 599

Query: 111 EQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKAREL------FESKKEAYKVEILES 164
            +  + +EL Q+E+++ + + +++P   + ++ + AR +       E   +  +V  +  
Sbjct: 600 AKGLTPEELTQVEREVNDYVRQNTPVETRIMTPDDARAMGAQALFGEKYGDEVRVVSMGQ 659

Query: 165 IPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFK 199
           +         +     +LC G HVR TG +  F  
Sbjct: 660 LEGSGK-GSNKSTYSLELCGGTHVRQTGDIGAFVL 693


>gi|154483909|ref|ZP_02026357.1| hypothetical protein EUBVEN_01615 [Eubacterium ventriosum ATCC
           27560]
 gi|149735400|gb|EDM51286.1| hypothetical protein EUBVEN_01615 [Eubacterium ventriosum ATCC
           27560]
          Length = 427

 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 47/351 (13%), Positives = 111/351 (31%), Gaps = 51/351 (14%)

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE 163
            + D D+++     E+  ++ +          + K+           +   E  K    E
Sbjct: 29  LFKDLDEKRRNLLGEVEALKAEQNATSKLIPQYKKEGKDVAPIMAEMKEISEKVKTLNGE 88

Query: 164 SIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
              A+E++  Y       +   P++ +    +       V                I   
Sbjct: 89  LSKAEEDLNNY-------MLTLPNIPNPTVPQGMTDEDNV---------------EIRKF 126

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTL 279
              T+ +           E + H  L  ++ +          GS    +   G K+ + +
Sbjct: 127 GEPTKFDF----------EPKAHWDLGADLGILDPETAAKISGSRFTVYRDLGAKLERAI 176

Query: 280 ISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALK 337
           +++       K  Y E+  P ++ +     +G    +  + + V+       D + + L 
Sbjct: 177 VNFFLDTHTTKHGYTEVFPPFMVSRESMTGTGQLPKFEEDAYKVQ------GDGKEYFLV 230

Query: 338 PMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVF 394
           P        ++ + +    +LP+    + + +R E   +     GL+R   F + +   F
Sbjct: 231 PTAEVPVTNMYRNQILDGSKLPIMHCAYTACFRAEAGSAGRDTRGLIRQHQFNKVELVKF 290

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALW 441
           C  E  ++E  K+      + +  G    +VK+                +W
Sbjct: 291 CKPETSYDELEKLTRDAEDVLQMLGLPYRVVKICIGDLGFTAAMKYDIEVW 341


>gi|21281738|ref|NP_644824.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
 gi|297209443|ref|ZP_06925841.1| serine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|300911467|ref|ZP_07128916.1| serine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
 gi|30173173|sp|Q8NYY2|SYS_STAAW RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|21203173|dbj|BAB93874.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
 gi|296885904|gb|EFH24839.1| serine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|300887646|gb|EFK82842.1| serine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
          Length = 428

 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 52/372 (13%), Positives = 129/372 (34%), Gaps = 35/372 (9%)

Query: 91  EVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIA--RDSPFLKQYLSHEKARE 148
           ++++     +      +   + P   DE+ +++++ +++I+   +    +  +S E A +
Sbjct: 3   DIRLFRNEPVTVKSKIELRGDDPKVVDEILELDEQRRKLISATEEMKARRNKVSEEIALK 62

Query: 149 LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYW 208
               +     +  + ++         +  E  D       + TG + +   L+       
Sbjct: 63  KRNKENADDVIAEMRTLGDDIKEKDSQLNE-IDN------KMTGILCRIPNLISDDVPQG 115

Query: 209 RGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFW 268
             D +   + + +GT      E   +   +EE +  D  + A+      +          
Sbjct: 116 ESDEDNVEVKK-WGTPREFSFEPKAHWDIVEELKMADFDRAAKVSGARFVYLTNE----- 169

Query: 269 HRKGWKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADD 326
              G ++ + L++YM  K   +  Y E+  PQ+++      +G    +  ++F V     
Sbjct: 170 ---GAQLERALMNYMITKHTTQHGYTEMMVPQLVNADTMYGTGQLPKFEEDLFKV----- 221

Query: 327 TIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRV 383
              +       P         + + +     LP +     + +R+E   +     GL+R+
Sbjct: 222 ---EKEGLYTIPTAEVPLTNFYRNEIIQPGVLPEKFTGQSACFRSEAGSAGRDTRGLIRL 278

Query: 384 RGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDA 439
             F + +   F   E  +N   ++     +I ++ G     V L T              
Sbjct: 279 HQFDKVEMVRFEQPEDSWNALEEMTTNAEAILEELGLPYRRVILCTGDIGFSASKTYDLE 338

Query: 440 LWDDAENIMKGV 451
           +W  + N  K +
Sbjct: 339 VWLPSYNDYKEI 350


>gi|268680375|ref|YP_003304806.1| seryl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
 gi|268618406|gb|ACZ12771.1| seryl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
          Length = 414

 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 65/187 (34%), Gaps = 16/187 (8%)

Query: 273 WKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
            ++ + LI+YM        + E+  P ++++     +G    +  ++F +        D 
Sbjct: 171 ARLERALINYMLDFNRSRGFHEVAVPYIVNRETLMGTGQLPKFEDDLFKI--------DG 222

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQ 388
               L P        +F   + S  ELP+++  + + +R E   +     G++R   F +
Sbjct: 223 EELFLIPTAEVPVTNLFRDEILSKEELPLKMTAYSACFRKEAGSAGKDTRGMIRQHQFDK 282

Query: 389 DDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG----SDALWDDA 444
            +     T EQ      ++ +    +    G     + L                +W   
Sbjct: 283 VELVSITTPEQSETVFEEMLSCASDLLSSLGLPHRHLMLCGGDLGFSAAKTVDLEVWLPG 342

Query: 445 ENIMKGV 451
           +N  + +
Sbjct: 343 QNRYREI 349


>gi|268318023|ref|YP_003291742.1| glycyl-tRNA synthetase [Rhodothermus marinus DSM 4252]
 gi|262335557|gb|ACY49354.1| glycyl-tRNA synthetase [Rhodothermus marinus DSM 4252]
          Length = 481

 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 52/374 (13%), Positives = 111/374 (29%), Gaps = 33/374 (8%)

Query: 276 FQTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFA 335
            + + +     +     +I   + +           +  + N+  V        +     
Sbjct: 124 RRLIEALNAEDMPKALYQIIMDERIPSPDSGAFDWTEVRQFNLMFVTHVGPVASEETKVY 183

Query: 336 LKPMNCPGHVAVFNHGLKSYR-ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           L+P    G    F++   S R ++P  +A+ G  +RNE   +   + R+R F Q +   F
Sbjct: 184 LRPETAQGIFVNFHNVKDSSRLQIPFGIAQIGKAFRNEIV-ARQFIFRMREFEQMEMQYF 242

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDT 454
                            +  + + G     ++     +    +DA  D         L  
Sbjct: 243 VKPGTQMEAFEAWKEKRLQWHIENGIRPDHLRFHVHEKLAHYADAAVDI------QYLFP 296

Query: 455 IKNSSQDRINTGVLLG---EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
           +     + I++           F G K EY   D   ++     +        R     +
Sbjct: 297 MGWQEVEGIHSRTDYDLRRHQEFSGKKMEYF--DPQTQERYIPYVVETSAGLDRTILMLL 354

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTI--TSSAVEYAQ 569
               ++       R V     R                L+PI+  V  +       E AQ
Sbjct: 355 CEAYDEEEVEGETRVVLRLHPR----------------LAPIKVAVLPLVRKDGMPERAQ 398

Query: 570 EIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
            +A  L+   L+   D +   I  + R       P  +    +   + ++ +R   +   
Sbjct: 399 ALARDLRPF-LNTFYDEKGA-IGRRYRRMDEVGTPFCVTIDSQTLEDGTVTVRDRDTMQQ 456

Query: 630 QKVSLLDAIPILTK 643
           ++V     +  +  
Sbjct: 457 ERVHETQVLAYIKD 470


>gi|227329399|ref|ZP_03833423.1| alanyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 875

 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 58/151 (38%), Gaps = 10/151 (6%)

Query: 56  EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGF-YYDFDKEQPF 114
             S+E       R    + HS  H++  A++ +  +     G ++ D +  +DF   +  
Sbjct: 545 NDSVEANVDSQRRDRIRLNHSATHLLHAALRQVLGDHVAQKGSLVNDSYLRFDFSHTEAM 604

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
             +++ Q+E  +   I R+       ++ + AR          K          ++V + 
Sbjct: 605 KPEQIRQVEDIVNAQIRRNLTVQTDVMALDDARAKGAMALFGEKY--------DDHVRVL 656

Query: 175 RQGEW-FDLCRGPHVRSTGQVKKFFKLMKVA 204
             G++  +LC G H   TG +  F  + +  
Sbjct: 657 TMGDFSIELCGGTHASRTGDIGLFQIISESG 687


>gi|56421108|ref|YP_148426.1| histidyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
 gi|81675744|sp|Q5KWS8|SYH_GEOKA RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|56380950|dbj|BAD76858.1| histidyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
          Length = 426

 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 67/432 (15%), Positives = 124/432 (28%), Gaps = 65/432 (15%)

Query: 265 VIFWHRKGWK--------IFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
           + F   +G +         +Q +    R       Y+EI TP        +         
Sbjct: 1   MAFQIPRGTQDVLPGDSEKWQYVEHIARSLCSRYGYQEIRTPIF---EHTELFLRGVGDT 57

Query: 316 ANMFAVKCADDTIKDLRTFALKPM-NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
            ++   +      K  R   L+P    P   A   H L      P++L   G ++R E  
Sbjct: 58  TDIVQKEMYTFEDKGGRALTLRPEGTAPVVRAFVEHKLYGSPNQPLKLYYSGPMFRYERP 117

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG--------------- 419
            +     R R F Q       + +   +   ++  L + IY+  G               
Sbjct: 118 EA----GRFRQFVQFGVEALGSSDPAIDA--EVMALAMHIYEALGLKRIRLVINSLGDLD 171

Query: 420 -FEKIMVKLSTRPEKRVGS---DALWDDAENIMKGVLDTIKNSSQDR-------INTGVL 468
                   L      R+     D       N ++ +LD  K+   +        ++    
Sbjct: 172 SRRAHREALVRHFSNRIHELCPDCQTRLHTNPLR-ILDCKKDRDHELMATAPSILDYLND 230

Query: 469 LGEGAFYGPK---------FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS---- 515
                F   K         F    +   G D+   T     +    F A           
Sbjct: 231 ESRAYFEKVKQYLTALGIPFVIDARLVRGLDYYNHTTFEIMSEAEGFGAAATLCGGGRYN 290

Query: 516 ----EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
               E   P         SIER +  +  + +G      S +   V  +   A + A  +
Sbjct: 291 GLVQEIGGPETPGIGFALSIERLLAAL--DAEGVELPVESGLDCYVVAVGERAKDEAVRL 348

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
              L+   L ++ D+    +  +++         + I GD+E   +   ++   S     
Sbjct: 349 VYALRRSGLRVDQDYLGRKLKAQLKAADRLGASFVAIIGDEELERQEAAVKHMASGEQTN 408

Query: 632 VSLLDAIPILTK 643
           V L +    L +
Sbjct: 409 VPLGELAHFLHE 420


>gi|291613882|ref|YP_003524039.1| histidyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1]
 gi|291583994|gb|ADE11652.1| histidyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1]
          Length = 423

 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 59/413 (14%), Positives = 113/413 (27%), Gaps = 58/413 (14%)

Query: 269 HRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
                 ++      +R  ++   Y  I  P V    L++++    +           DD 
Sbjct: 16  LPDEAGLWLWFEEVVRDWLEAYGYRNIRMPLVEPTALFKRAIGEVTDIVEKEMYSFRDDL 75

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
             D     L+P      V         Y   P RL   G ++R+E         R R F 
Sbjct: 76  NGD--ELTLRPEGTASCVRAVLQHNLLYNA-PQRLYYSGPMFRHERPQK----GRYRQFH 128

Query: 388 QD--DAHVFCTKEQMFNECLKIHNLIISI--------YKDFGFEKIMVKLSTRPEKRVGS 437
           Q   +A  F   +    + +    L   +            G      +   +       
Sbjct: 129 QIGVEAMGFAGPDIDAEQIVMCARLWKKLGIRDVALQINTLGDVAARQRHREKLIAYFEQ 188

Query: 438 DALWDDAENIMK-------------GVLDTIKNSSQDRINTGVLLGEGAF---------Y 475
                DA+   +               +  +  ++   ++         F         +
Sbjct: 189 HKDVLDADGQRRLYSNPLRILDTKNPAMQELVAAAPKLMDELDEDAITHFEAVQAILQQH 248

Query: 476 GPKFEYILKDAIGRDWQCGTI----------QVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
           G  FE   +   G D+   T+          Q       RF+        +         
Sbjct: 249 GIAFEINPRLVRGLDYYNRTVFEWVTTRLGAQGTICAGGRFDGLIEQIGGKPAPACGFAM 308

Query: 526 AVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD 585
            V    ER + ++ E+   N     +P+   V      A   A  +A  L+   L +   
Sbjct: 309 GV----ERLLALLQEDGMQNPA---APLDVYVVHQGEQARIQAWRVAEDLRDGGLRVLLH 361

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR-RFGSTTTQKVSLLDA 637
               +   ++++          I GD E +   + ++        Q+V L D 
Sbjct: 362 CGGGSFKSQMKKADASAAVCAAIIGDDEVAANVVMLKPLRSGGEQQRVGLDDL 414


>gi|256851919|ref|ZP_05557307.1| seryl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260661820|ref|ZP_05862730.1| seryl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
 gi|282931840|ref|ZP_06337321.1| serine--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|297205544|ref|ZP_06922940.1| serine--tRNA ligase [Lactobacillus jensenii JV-V16]
 gi|256615877|gb|EEU21066.1| seryl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260547289|gb|EEX23269.1| seryl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
 gi|281304003|gb|EFA96124.1| serine--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|297150122|gb|EFH30419.1| serine--tRNA ligase [Lactobacillus jensenii JV-V16]
          Length = 435

 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 54/354 (15%), Positives = 121/354 (34%), Gaps = 41/354 (11%)

Query: 108 FDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKV--EILESI 165
            D+++     E   ++ K  E+    +   +   + + A +      E  K   E +  +
Sbjct: 34  IDEKRRAKLSETEALKAKRNEVSKEIANKKRNKENADDAIKAMREVGEQIKKLDEEVAEL 93

Query: 166 PAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAW 225
             K+N  L R   + D    P        ++  K  +     +                 
Sbjct: 94  SEKQNYILLRLPNFPDDS-DPIGPDESYNQEVRKWNEPTKFNF----------------- 135

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISY-MR 284
               +   +    ++    D    A+      +   G+        G  + + + ++ + 
Sbjct: 136 ----DPKAHWDLGDDLHILDFDTAAKVSGARFVYYKGA--------GALLERAVYNFFLD 183

Query: 285 RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
              K+ Y E+  P +++    Q +G +  +  +++ +   DD  K L    L P      
Sbjct: 184 ENTKEGYTEVIPPYLVNDDSMQGTGQFPKFTEDVYTIVDNDDPDKPL-NLTLIPTAEVPL 242

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMF 401
           V  F   +   ++LP+ +      +R+E   +     GL+R+  F + +    C  E+ +
Sbjct: 243 VNYFRGEIVDGKKLPINVTALTPAFRSEAGSAGRDTRGLIRMHQFNKVEMVKVCKPEESW 302

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
           NE  K+ +    + +  G    +V LST              +W  A+N  + +
Sbjct: 303 NELDKLTHNAEHLLQKLGLPYHVVALSTGDASFTSAKTYDLEVWMPAQNKYREI 356


>gi|312092911|ref|XP_003147501.1| hypothetical protein LOAG_11937 [Loa loa]
 gi|307757334|gb|EFO16568.1| hypothetical protein LOAG_11937 [Loa loa]
          Length = 303

 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 39/201 (19%), Positives = 71/201 (35%), Gaps = 23/201 (11%)

Query: 21  ATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAV------I 73
           +T  D  + ISR  A +      NG    + + +   G +  +                 
Sbjct: 56  STFRDCMKHISRLKADRMALACANGSYKSVLEKLSGNGKMIPLGYNCQDKHHASAVNMAY 115

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPII----EDGFYY-----DFDKEQPFSSDELAQIEK 124
             +CA ++   V   +      +GP         F Y     +     P S +  A  EK
Sbjct: 116 WRTCAFLLGAVVDEAFAVDVQLVGPSTIDYHSGRFEYIARIKNLQNWTPNSENLFALTEK 175

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIP-----AKENVTLYRQGEW 179
            + E IA+        +S + A +L       +K E++  +       ++ V +YR G++
Sbjct: 176 AIGEYIAKALIVEPLLVSLDFALDL--FDSNVWKQELVHKMKHETENGEQGVIIYRMGDF 233

Query: 180 FDLCRGPHVRSTGQVKKFFKL 200
            D+  GP +  T  + KF   
Sbjct: 234 VDVTYGPLIPYTSHIDKFALT 254


>gi|262041004|ref|ZP_06014225.1| serine-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
 gi|259041639|gb|EEW42689.1| serine-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
          Length = 430

 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 64/188 (34%), Gaps = 10/188 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M     +   Y E   P +++Q     +G    +  ++F  +  ++   D
Sbjct: 170 ARLHRALAQFMLDLHIEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLFHTRPLEEEA-D 228

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
              +AL P        +    +    +LP+++      +R+E         GL+R+  F 
Sbjct: 229 SSNYALIPTAEVPLTNLVRDEIIDEDDLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFD 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E       ++      + +  G     V L T              +W  
Sbjct: 289 KVEMVQIVRPEDSMAALEEMTGHAEKVLQLLGLPYRKVALCTGDMGFSACKTYDLEVWVP 348

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 349 AQNTYREI 356


>gi|154304091|ref|XP_001552451.1| hypothetical protein BC1G_09681 [Botryotinia fuckeliana B05.10]
 gi|150854316|gb|EDN29508.1| hypothetical protein BC1G_09681 [Botryotinia fuckeliana B05.10]
          Length = 426

 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 70/189 (37%), Gaps = 12/189 (6%)

Query: 462 RINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
           ++   + LG     G ++   ++  +       +  V  NL +  N      + +   P+
Sbjct: 243 KVEKAIELGHTFHLGTRYSKPMEATV----TVPSGLVGGNLKAGENEPQQGRNDQIQVPM 298

Query: 522 MIHRAVFGSIERFIGIMIENFKG----NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKS 577
            +     G   R +G + E        N P  ++P + +V        E A +I + L +
Sbjct: 299 EMGCHGIGVT-RMVGAVAETLADEKGLNWPRVMAPFEIVVVP-GKGLDEDALQIFDTLSA 356

Query: 578 HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASE-RSIGIRRFG-STTTQKVSLL 635
             +    D R  +I +K+++  +   P+I++ G K       +  RR       +   L 
Sbjct: 357 AAMDPVVDDREVSIGWKMKDADLIGYPVIVLLGRKWKEGLCEVQCRRLDVKEDIRVEDLK 416

Query: 636 DAIPILTKE 644
           + +  L  +
Sbjct: 417 NFVGKLLSQ 425


>gi|312130764|ref|YP_003998104.1| seryl-tRNA synthetase [Leadbetterella byssophila DSM 17132]
 gi|311907310|gb|ADQ17751.1| seryl-tRNA synthetase [Leadbetterella byssophila DSM 17132]
          Length = 423

 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/198 (17%), Positives = 68/198 (34%), Gaps = 16/198 (8%)

Query: 245 DHRKLAREMDLFHIA----EDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQV 299
            H  L ++ D+          G+G  F+  KG KI + LI++ +    K  Y E+  P V
Sbjct: 143 PHWDLIKKYDIIDFELGNKVSGAGFPFYKGKGAKIQRALINFFLNEAEKAGYFEVQPPIV 202

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           ++            +       K             L P        ++   + S  ELP
Sbjct: 203 INA--------ASGFGTGQLPDKEGQMYHATADDLYLIPTAEVPVTNMYRDVILSENELP 254

Query: 360 VRLAEFGSVYRNEPSG---SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
            +   +   +R E       + GL R+  F + +     T E+ ++   ++ N +  + +
Sbjct: 255 KKNVAYTPCFRREAGSWGAHVRGLNRLHQFDKVEIVQITTPEKSYDALEEMLNHVRGLLE 314

Query: 417 DFGFEKIMVKLSTRPEKR 434
                  ++KL       
Sbjct: 315 KLQLPYRILKLCGGDMSF 332


>gi|332364081|gb|EGJ41858.1| histidine--tRNA ligase [Streptococcus sanguinis SK49]
          Length = 426

 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 62/418 (14%), Positives = 129/418 (30%), Gaps = 68/418 (16%)

Query: 269 HRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
             +    +Q +  + R+  +  +Y EI TP       ++          ++   +  D  
Sbjct: 13  LPQESAKWQYVEGFARKTFRKYNYGEIRTPIF---EHYEVISRSVGDTTDIVTKEMYDFY 69

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKS-----YRELPVRLAEFGSVYRNEPSGSLHGLMR 382
            K  R   L+P    G   V    +++       + PV++   GS++R E   +     R
Sbjct: 70  DKGDRHITLRP---EGTAPVVRSYVENKLFAPEVQKPVKVYYMGSMFRYERPQA----GR 122

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD------------FGFEKIMVKLSTR 430
           +R F Q  A  F +        +++  +    +KD             G  +        
Sbjct: 123 LREFHQIGAECFGSNNPA--TDVEMIAMAAQFFKDIGITNVSLELNSLGNPESRAAYRQA 180

Query: 431 PEKRVG------SDALWDDAENIMKGVLDTIKNSSQDRIN-----TGVLLGEGAFYGPKF 479
               +       S       E     VLD+ +   +  +         L  E + Y    
Sbjct: 181 LIDYLTPLKASLSADSQRRLEENPLRVLDSKEPEDKAAVEGAPSILDYLDEESSNYFAAV 240

Query: 480 EYILKD-----------AIGRDWQCGTI----------QVDFNLPSRFNAFYVNSHSEKC 518
             +L+              G D+   TI          Q+      R++         + 
Sbjct: 241 RSMLETLQIPYVINTNMVRGLDYYNHTIFEFTTEVAGSQLTICAGGRYDGLVAYFGGPET 300

Query: 519 HPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSH 578
             V     +    ER + ++  + +G      + +   V  +   A   A E+   L++ 
Sbjct: 301 PGVGFGMGL----ERLLLVL--DKQGVELPIETALDVYVAVLGPGANGRALELVQALRAQ 354

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
             + E D+ +  +  + +     K   +I  G+ E     + ++   +     VSL  
Sbjct: 355 GFAAERDYLDRKLKAQFKSADTFKAKTLITLGESEVESGQVTVKNNHNREEITVSLDQ 412


>gi|293376411|ref|ZP_06622645.1| serine--tRNA ligase [Turicibacter sanguinis PC909]
 gi|325839304|ref|ZP_08166770.1| serine--tRNA ligase [Turicibacter sp. HGF1]
 gi|292644967|gb|EFF63043.1| serine--tRNA ligase [Turicibacter sanguinis PC909]
 gi|325490586|gb|EGC92901.1| serine--tRNA ligase [Turicibacter sp. HGF1]
          Length = 424

 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 39/251 (15%), Positives = 83/251 (33%), Gaps = 25/251 (9%)

Query: 210 GDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWH 269
            D N  +  R YG       E   +   + + +  D  +  +           S    + 
Sbjct: 116 KDENDNVEIRKYGEPTKFDFEPKAHWDLVTDLDIIDFERAGKITG--------SRFAVYK 167

Query: 270 RKGWKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
             G ++ + LIS+M         Y EI  P ++++     +G    +  + F +  +D  
Sbjct: 168 GLGARLERALISFMLDLHTGDHGYTEILPPVIVNRASMTGTGQLPKFEDDAFKLVDSD-- 225

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVR 384
                 + L P        +    + S  +LP++   +   +R E   +     G++R  
Sbjct: 226 ------YFLIPTAEVPVTNLHRDEILSADQLPIKYTAYSPCFRAEAGSAGRDTRGIIRQH 279

Query: 385 GFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDAL 440
            F + +   F   E  + E   +      + +  G    +++L T              +
Sbjct: 280 QFNKVELVKFVKPEDSYQELESLTANAEKVLQLLGLPYRVIELCTGDIGFSAAKTYDIEV 339

Query: 441 WDDAENIMKGV 451
           W  + N  K +
Sbjct: 340 WLPSYNAYKEI 350


>gi|269960382|ref|ZP_06174755.1| alanyl-tRNA synthetase [Vibrio harveyi 1DA3]
 gi|269834809|gb|EEZ88895.1| alanyl-tRNA synthetase [Vibrio harveyi 1DA3]
          Length = 860

 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 59/143 (41%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFS 115
             +  I   + R+   + HS  H++  A++ +  E     G +++ D   +DF   +  +
Sbjct: 545 DEVATIVDAERRAAISLNHSATHLLHAALRQVLGEHVTQKGSLVKADSLRFDFSHLEAVT 604

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           + EL ++E+ +   I R+       +  E A++         K          + V +  
Sbjct: 605 AAELKEVERLVNAQIRRNHTIETNVMDIESAKKKGAMALFGEKY--------DDEVRVLS 656

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G++  +LC G H  +TG +  F
Sbjct: 657 MGDFSTELCGGIHASNTGDIGLF 679


>gi|269216691|ref|ZP_06160545.1| serine--tRNA ligase [Slackia exigua ATCC 700122]
 gi|269129925|gb|EEZ61008.1| serine--tRNA ligase [Slackia exigua ATCC 700122]
          Length = 426

 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/189 (19%), Positives = 65/189 (34%), Gaps = 17/189 (8%)

Query: 271 KGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
            G ++ + LI++M    I   Y+E   P + +      +G    +          DD  K
Sbjct: 170 LGARLERALINFMIDTHISRGYKEWWPPAMANATTLFGTGQLPKF---------EDDLFK 220

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGF 386
                 L P        +    +    +LP++   F   +R E   +     GL+RV  F
Sbjct: 221 TREGMYLIPTAEVQLTNIHAQEVLDASDLPLKYCAFTPCFREEAGSAGRDTRGLIRVHQF 280

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWD 442
            + +   F T E  FN+   +     +I K  G    ++ L T              +W 
Sbjct: 281 DKVEMVKFATPEDGFNQLELMTADAENILKLLGLPHRVISLCTGDLGFSAAKTYDLEVWL 340

Query: 443 DAENIMKGV 451
            + +  K +
Sbjct: 341 PSYDGYKEI 349


>gi|321311056|ref|YP_004193385.1| seryl-tRNA synthetase [Mycoplasma haemofelis str. Langford 1]
 gi|319802900|emb|CBY93546.1| seryl-tRNA synthetase [Mycoplasma haemofelis str. Langford 1]
          Length = 404

 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 38/228 (16%), Positives = 82/228 (35%), Gaps = 21/228 (9%)

Query: 236 YFLEESEKRDHRKLAREMDLFHI----AEDGSGVIFWHRKGWKIFQTLISY-MRRKIKDD 290
                     H +LA+    F +       GSG + +  +G +IF+ LI   +       
Sbjct: 116 KKEYSFTPLSHSELAKRNRFFDLVSGADISGSGYVVYTGEGARIFRALIRLTLDENASKG 175

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH 350
           Y E   P +++      +     +  ++F V              L P +    V ++ +
Sbjct: 176 YSERYLPVLVNSDCLLGTAQLPKFEEDLFKVSDDK---------YLSPTSETQLVNLYRN 226

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
            +    ELP++L    + +R E   +     G++R+  F + +  VFC  E+ +     +
Sbjct: 227 RIVEASELPIKLTANTNCFRREAGSAGVDTAGVIRLHQFNKTEIVVFCKPEESYEWLQVM 286

Query: 408 HNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENIMKGV 451
                SI +       +++L+               +W  +E+  + +
Sbjct: 287 VKDACSILEKLNLPYRVLQLAQNDISFASAKTYDIEVWLPSESRYREI 334


>gi|282891064|ref|ZP_06299569.1| hypothetical protein pah_c045o080 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281499057|gb|EFB41371.1| hypothetical protein pah_c045o080 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 515

 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 46/322 (14%), Positives = 106/322 (32%), Gaps = 38/322 (11%)

Query: 335 ALKPMNCPGHVAVFNHGLKSYR-ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
            L+P    G    F + L + R ++P  +A+ G  +RNE +   +   R R F Q +   
Sbjct: 217 YLRPETAQGIFVNFRNVLDTSRVKMPFGIAQIGKAFRNEVTPR-NFTFRSREFEQMEIEF 275

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
           F   +   +            ++  G     ++L  +                     L+
Sbjct: 276 FVPPKDAADWYQYWRKKRYEWWQSIGISSENLRLRAQT--------------------LE 315

Query: 454 TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS 513
            + + +++   +  +  +  F  P F  +   A   D+             R   +Y   
Sbjct: 316 ELAHYAKEGAGSSDIEYKFPFTDPDFGELEGIAHRTDYDLRQHAEHSGQGDRLK-YYDQE 374

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIMIENFK----------GNLPLWLSPIQAIVTTITSS 563
            +E+  P +I     G+    + ++ E +                 ++PI+A +  +   
Sbjct: 375 KNERYFPHVIE-PSAGADRGALALLCEAYHDDPNRPSGVVMKFHPRMAPIKAAIFPLVDK 433

Query: 564 AV--EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
               E A+++   L+     I+ D +   I  +         P       +   ++++ +
Sbjct: 434 DGMPEIARQLFTDLRKKWP-IQLDVKQN-IGKRYARMDEVGTPYCFTVDTQTLQDQTVTV 491

Query: 622 RRFGSTTTQKVSLLDAIPILTK 643
           R   +   +++ L      LT 
Sbjct: 492 RYRDTLQQERIGLDQVKQFLTD 513


>gi|224024370|ref|ZP_03642736.1| hypothetical protein BACCOPRO_01094 [Bacteroides coprophilus DSM
           18228]
 gi|224017592|gb|EEF75604.1| hypothetical protein BACCOPRO_01094 [Bacteroides coprophilus DSM
           18228]
          Length = 425

 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 69/198 (34%), Gaps = 16/198 (8%)

Query: 245 DHRKLAREMDLFHIA----EDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQV 299
            H +LA++ DL          G+G   +  KG ++ + LI++ +       YEEI  P V
Sbjct: 143 PHWELAKKYDLIDFDLGVKITGAGFPVYKGKGARLQRALINFFLDEAHAAGYEEIMPPTV 202

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           ++            Y       K       +L    L P        ++   +   ++LP
Sbjct: 203 VNA--------ASGYGTGQLPDKEGQMYHCNLDDLYLIPTAEVPVTNIYRDVILDEKQLP 254

Query: 360 VRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ++   +   +R E       + GL R+  F++ +       E       ++ + +  + K
Sbjct: 255 IKNCAYTQCFRREAGSYGKDVRGLNRLHEFSKIELVRIDKPEHSKQSHQEMLDHVEGLLK 314

Query: 417 DFGFEKIMVKLSTRPEKR 434
                  +++L       
Sbjct: 315 KLELPYRILRLCGGDMSF 332


>gi|76800818|ref|YP_325826.1| glycyl-tRNA synthetase [Natronomonas pharaonis DSM 2160]
 gi|76556683|emb|CAI48255.1| glycine--tRNA ligase [Natronomonas pharaonis DSM 2160]
          Length = 578

 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 60/198 (30%), Gaps = 29/198 (14%)

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG 529
              AF G   + +  +  G ++            + F         E   P ++      
Sbjct: 393 DRSAFDG---DEVTVEVDGDEYTVP------VERTGFAVEEQTEAGEHITPHVV--EPSF 441

Query: 530 SIERFIGIMIENFKG------------NLPLWLSPIQAIV--TTITSSAVEYAQEIANLL 575
            + R +  ++ +  G            +LP  L+P    V          + A+E++  L
Sbjct: 442 GVGRLVYSVLVHSHGTDTVDDEERTYLDLPAELAPTTVAVFPLMTKDGLDDRAREVSETL 501

Query: 576 KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
           +     +  D     I  + R       P  +    +   + ++ IR   ST   +V + 
Sbjct: 502 REAGFEVAYDDTGN-IGRRYRRQDEVGTPYCVTVDYETQEDGTVTIRERDSTDQTRVPVE 560

Query: 636 ---DAIPILTKESLPPDC 650
               AI  L   +   + 
Sbjct: 561 GLPAAIAELVDGATLAEL 578



 Score = 52.1 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 44/280 (15%), Positives = 85/280 (30%), Gaps = 79/280 (28%)

Query: 247 RKLAREMDLFHIAEDGSG----VIFWHRKGWKIFQTLISYMRRKIKD--DYEEINTPQVL 300
            +LA+    F  + +  G       +  +G  + + L    R          E+  P V+
Sbjct: 8   TELAKRRGFFFSSNEAYGGTAGFYTYGPEGAALKRNLEDIWRDIFVRELGNMELEAPTVM 67

Query: 301 DQHLWQQSGHWDSYRANM-------------FAVKCADDTIKDLRTF------------- 334
            + +++ SGH D +   +               V+   + I+D   +             
Sbjct: 68  PEAVFEASGHLDGFDDMIIECPECGATHRADHLVEDEIEDIEDAEAYEPTEVAELIATHH 127

Query: 335 ----------------------------------ALKPMNCPGHVAVF-NHGLKSYRELP 359
                                              L+P    G    F      +  +LP
Sbjct: 128 IECPSCGESLAGESVEEFNLMFGTNIGPGSSAPGYLRPETAQGIFVEFPRLKEYARNKLP 187

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
             +A+ G  YRNE S     L+RVR FTQ +   F   E+      ++ ++ + +Y    
Sbjct: 188 FGVAQIGRAYRNEISPR-RALVRVREFTQAELEHFIDPERDEPPIDRVADVELPLYS--- 243

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSS 459
                           G    +  AE +  G++++   + 
Sbjct: 244 --------VANQNAENGGVETYTVAEAVDSGIIESEWVAY 275


>gi|328958771|ref|YP_004376157.1| serine--tRNA ligase [Carnobacterium sp. 17-4]
 gi|328675095|gb|AEB31141.1| serine--tRNA ligase [Carnobacterium sp. 17-4]
          Length = 427

 Score = 66.3 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 46/346 (13%), Positives = 108/346 (31%), Gaps = 48/346 (13%)

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
           +++EL     ++   IA      +   + ++  +      E  K    +     E +   
Sbjct: 44  TTEELKSYRNEVSGAIAM---LKRSKENADEKIKEMRDVGEKIKDLDEQLAAIDEKIETI 100

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
             G        P++          +   V    W             GT      E   +
Sbjct: 101 ATG-------LPNLPHDSVPVGADEADNVEVRKW-------------GTPVEVAFEAKAH 140

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI--KDDYE 292
               EE +  D  + A+      +   G         G ++ + + ++M      +  Y 
Sbjct: 141 WEVAEELDILDFERGAKVSGSRFVYYKG--------LGARLERAVYNFMLDLHTGEHGYT 192

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+ TP +++      +G +  ++ ++F ++  D T+         P         + + +
Sbjct: 193 EMMTPYLVNSDSMFGTGQFPKFKEDVFQIEGTDLTLI--------PTAEVPLTNYYRNEI 244

Query: 353 KSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
               +LPV        +R+E   +     GL+R+  F + +   F   E  ++E  K+ N
Sbjct: 245 LKEEQLPVYFTALSPSFRSEAGSAGRDTRGLIRLHQFNKVEMVKFSKPETSYDELEKMTN 304

Query: 410 LIISIYKDFGFEKI----MVKLSTRPEKRVGSDALWDDAENIMKGV 451
              ++ +                     +     +W  A+   + +
Sbjct: 305 NAEAVLQKLNLPYRVLALCTGDMGFSAAKTYDLEVWIPAQETYREI 350


>gi|324991954|gb|EGC23877.1| histidine--tRNA ligase [Streptococcus sanguinis SK405]
 gi|324996153|gb|EGC28063.1| histidine--tRNA ligase [Streptococcus sanguinis SK678]
 gi|332363514|gb|EGJ41295.1| histidine--tRNA ligase [Streptococcus sanguinis SK1059]
          Length = 426

 Score = 66.3 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 57/418 (13%), Positives = 126/418 (30%), Gaps = 68/418 (16%)

Query: 269 HRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
             +    +Q +  + R+  +  +Y EI TP       ++          ++   +  D  
Sbjct: 13  LPQESAKWQYVEDFARKTFRKYNYGEIRTPIF---EHYEVISRSVGDTTDIVTKEMYDFY 69

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKS-----YRELPVRLAEFGSVYRNEPSGSLHGLMR 382
            K  R   L+P    G   V    +++       + PV++   GS++R E   +     R
Sbjct: 70  DKGDRHITLRP---EGTAPVVRSYVENKLFAPEVQKPVKVYYMGSMFRYERPQA----GR 122

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD------------FGFEKIMVKLSTR 430
           +R F Q  A  F +        +++  +    +KD             G  +        
Sbjct: 123 LREFHQIGAECFGSSNPA--TDVEMIAMAAQFFKDIGITNVSLELNSLGNPESRAAYRQA 180

Query: 431 PEKRVG------SDALWDDAENIMKGVLDTIKNSSQDRIN------TGVLLGEGAFYGP- 477
               +       S       E     VLD+ +   +  +         +     A++   
Sbjct: 181 LIDYLTPLKPSLSADSQRRLEENPLRVLDSKEPEDKAAVEGAPSILDYLDEESSAYFAAV 240

Query: 478 -------------------KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC 518
                                +Y          +    Q+      R++         + 
Sbjct: 241 RSMLETLQIPYVINTNMVRGLDYYNHTIFEFTTEVAGSQLTICAGGRYDGLVAYFGGPET 300

Query: 519 HPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSH 578
             V     +    ER + ++  + +G      + +   V  + + A   A E+   L++ 
Sbjct: 301 PGVGFGMGL----ERLLLVL--DKQGVELPIETALDVYVAVLGAGANGRALELVQALRAQ 354

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
             + E D+ +  +  + +   I K   +I  G+ E     + ++   +     VSL  
Sbjct: 355 GFAAERDYLDRKLKAQFKSADIFKAKTLITLGESEVESGQVTVKNNHNREEITVSLDQ 412


>gi|237730858|ref|ZP_04561339.1| seryl-tRNA synthetase [Citrobacter sp. 30_2]
 gi|226906397|gb|EEH92315.1| seryl-tRNA synthetase [Citrobacter sp. 30_2]
          Length = 430

 Score = 66.3 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 63/188 (33%), Gaps = 10/188 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M     +   Y E   P +++      +G    +  ++F  +  D+   D
Sbjct: 170 ARMHRALSQFMLDLHTEQHGYSENYVPYLVNHDTLYGTGQLPKFAGDLFHTRPLDEEA-D 228

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
              +AL P        +    +     LP+++      +R+E         GL+R+  F 
Sbjct: 229 SSNYALIPTAEVPLTNLVRDEIIDEDALPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFD 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E   +   ++      + +  G     + L T              +W  
Sbjct: 289 KVEMVQIVRPEDSMDALEEMTGHAEKVLQLLGLPYRKIILCTGDMGFGACKTYDLEVWIP 348

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 349 AQNTYREI 356


>gi|324518325|gb|ADY47073.1| 39S ribosomal protein L39 [Ascaris suum]
          Length = 320

 Score = 66.3 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 43/214 (20%), Positives = 83/214 (38%), Gaps = 24/214 (11%)

Query: 5   IKLTFPDGSIKNF---PVHATGSDVAESISRSLAKKAVAVAINGKVCD-----LSDPVRE 56
           I +   DG  ++       +T  D A+ ISR  A+      +  +  +      +    +
Sbjct: 59  ITVQKEDGEERHLLMNNRLSTFYDCAKHISRLKAQNTAVAHVIAESSEYFASPHTTIDGK 118

Query: 57  GSIEIITPEDPRS----LAVIRHSCAHIMAEAVQSIWPEVQVAIG---PIIEDGFYY--- 106
             +E++   + +           SCA ++    +S +      IG   P++E G +    
Sbjct: 119 ARVELLEFNNAKFADNVNKAYWRSCAFLLGAVAESSFRANVCIIGSLPPVVESGRFVHAA 178

Query: 107 --DFDKEQPFSSDELAQIEKKM-QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE 163
             +   +   S  EL  +  K+ ++ +    PF    +  + A +LF       KVE + 
Sbjct: 179 AIEGLHDWKPSKAELNALTGKVLRDFVFMALPFEPLTVERKFAADLFAE--NERKVEHIM 236

Query: 164 SIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
                 NVTLY+ G   D+   P + +T Q+ +F
Sbjct: 237 K-GDDANVTLYKVGGHVDVAEEPLIANTRQIGRF 269


>gi|295399338|ref|ZP_06809320.1| histidyl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93]
 gi|294978804|gb|EFG54400.1| histidyl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93]
          Length = 423

 Score = 66.3 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 65/422 (15%), Positives = 137/422 (32%), Gaps = 61/422 (14%)

Query: 269 HRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
                + +Q +    R   +  +Y EI TP        +          ++   +     
Sbjct: 13  LPGETEKWQYVEKIARDICRRYNYREIRTPIF---EHTELFLRGVGDTTDIVQKEMYTFE 69

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYR----ELPVRLAEFGSVYRNEPSGSLHGLMRV 383
            +  R+  L+P    G   V    +++        P++L   G ++R E   +     R 
Sbjct: 70  DRGGRSITLRP---EGTAPVVRSFVENKMYGDPNQPIKLYYIGPMFRYERPQA----GRF 122

Query: 384 RGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM--------------VKLST 429
           R F Q       + +   +   ++  + + +Y+  G +K+                + + 
Sbjct: 123 RQFVQFGVEALGSDDPAIDA--EVIAMAMELYQSLGLKKVRLVINSLGDIESRKAHRQAL 180

Query: 430 RPEKRVGSDALWDDAENIMKG----VLDTIKNSSQDRINTG-----VLLGEGAFYGPK-- 478
               +       +D +  +K     +LD  K+   + + T       L  E + Y  K  
Sbjct: 181 IDHFQNRIHEFCEDCQVRLKKNPLRILDCKKDRDHELMATAPSILDYLNEESSRYFEKVK 240

Query: 479 ---------FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS--------EKCHPV 521
                    FE   +   G D+   T     +    F A               E   P 
Sbjct: 241 AYLEKLGIPFEVDARLVRGLDYYNHTTFEIMSDAEGFGAITTLCGGGRYNGLVQEIGGPE 300

Query: 522 MIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLS 581
                   SIER +  +  + +G        I   V  I   A E + ++ + L+   ++
Sbjct: 301 APGIGFALSIERLLAAL--DAEGVALPVQRGIDCYVVAIGEKAKEESVQLVHELRKAGIA 358

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            + D+++  I  +++         + I G+ E ++  I I+  G+    +V L   +  L
Sbjct: 359 ADKDYQDRKIKAQLKAADRLNAKFVAILGEDELAKEVINIKEMGTGEQTEVPLPSVVDYL 418

Query: 642 TK 643
            +
Sbjct: 419 KE 420


>gi|259418847|ref|ZP_05742764.1| alanyl-tRNA synthetase [Silicibacter sp. TrichCH4B]
 gi|259345069|gb|EEW56923.1| alanyl-tRNA synthetase [Silicibacter sp. TrichCH4B]
          Length = 903

 Score = 66.3 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/140 (22%), Positives = 56/140 (40%), Gaps = 5/140 (3%)

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDELAQ 121
                RS     HS  H++ EA+++   E     G     +   +DF   +  S ++L +
Sbjct: 569 VDHTRRSQIRANHSATHLLHEALRNALGEHVAQKGSLNAAERLRFDFSHNKAVSQEDLTK 628

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYK----VEILESIPAKENVTLYRQG 177
           I  ++ + I ++SP   + ++ + AR L        K    V ++    A          
Sbjct: 629 IASEVNDFIRQNSPVSTRIMTPDDARALGAQALFGEKYGEEVRVVSMGRADTGKGADGDT 688

Query: 178 EWFDLCRGPHVRSTGQVKKF 197
              +LC G HV+ TG +  F
Sbjct: 689 YSIELCGGTHVKQTGDIGTF 708


>gi|210623920|ref|ZP_03294129.1| hypothetical protein CLOHIR_02081 [Clostridium hiranonis DSM 13275]
 gi|210153284|gb|EEA84290.1| hypothetical protein CLOHIR_02081 [Clostridium hiranonis DSM 13275]
          Length = 423

 Score = 66.3 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 48/320 (15%), Positives = 105/320 (32%), Gaps = 31/320 (9%)

Query: 137 LKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKK 196
            ++ L  E      E   E+ K+  L            R  E  D  +G  V+       
Sbjct: 37  QRRDLLKEVEVLKQELNVESKKIPQLIKEGKDVTEDKARLKELSDKIKGIDVQ------- 89

Query: 197 FFKLMKVAGAYWRGDSNRPMLSRI-YGTAWNTQQELTQYLYFLEES-EKRDHRKLAREMD 254
             K ++    Y            +  G       E+ ++    +   E++ H  +  ++ 
Sbjct: 90  -VKEVEDKLNYTLMRIPNVPHPDVPQGETDEDNVEVKKWGEPRKFDFEQKAHWDIGTDLG 148

Query: 255 LFHIAE----DGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQS 308
           +          GS    +   G ++ ++LI++          Y E+  P + ++  +  +
Sbjct: 149 ILDFERAGKITGSRFTLYKGLGARLERSLINFFLNTHTADHGYTEVLPPFMANRDSFCGT 208

Query: 309 GHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV 368
           G    +  +MF +        +   + L P        +  + + +  +LP++   +   
Sbjct: 209 GQLPKFEEDMFKL--------EGLEYFLVPTAEVPVTNIHRNEILTADQLPIKYCAYTPC 260

Query: 369 YRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
           +R+E   +     GL+R   F + +   F   E  ++E  K+      I +  G     V
Sbjct: 261 FRSEAGSAGRDTRGLVRQHQFNKVELVKFVLPENSYDELEKLTMDAEEILQLLGLPYRRV 320

Query: 426 KLSTRPEKRVG----SDALW 441
           K+ T              +W
Sbjct: 321 KICTGDLGFTAAFKFDLEVW 340


>gi|118479561|ref|YP_896712.1| histidyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|196044856|ref|ZP_03112090.1| histidyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|225866385|ref|YP_002751763.1| histidyl-tRNA synthetase [Bacillus cereus 03BB102]
 gi|229186643|ref|ZP_04313804.1| Histidyl-tRNA synthetase 2 [Bacillus cereus BGSC 6E1]
 gi|118418786|gb|ABK87205.1| histidyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|196024344|gb|EDX63017.1| histidyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|225788488|gb|ACO28705.1| histidine--tRNA ligase [Bacillus cereus 03BB102]
 gi|228596902|gb|EEK54561.1| Histidyl-tRNA synthetase 2 [Bacillus cereus BGSC 6E1]
          Length = 476

 Score = 66.3 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 74/465 (15%), Positives = 151/465 (32%), Gaps = 64/465 (13%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWK--------IFQTLISY 282
              Y   +   +  +       + L    E+   +     +G +        ++Q +   
Sbjct: 21  HHGYNTLVPTVQTVEAGVFLFLLRLKQFEEEL-NMSIQIPRGTQDILPGTVELWQYIEGQ 79

Query: 283 MRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPM-N 340
            R   +  +Y+EI TP        +          ++   +      +  R+  L+P   
Sbjct: 80  AREICRRYNYKEIRTPIF---EHTELFLRGVGDTTDIVQKEMYSFQDRGERSLTLRPEGT 136

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
            P   +   + +      P +L   G ++R E   +     R R F Q       + +  
Sbjct: 137 APVVRSYVENKMFGDATQPTKLYYIGQMFRYERPQA----GRYRQFVQFGIEAIGSNDPA 192

Query: 401 FNECLKIHNLIISIYKDFGFEKI---MVKLSTRPEKRVGSDALWDDAENIMKG------- 450
            +   ++  L +  Y+  G + I   +  L     ++   DAL    E  +         
Sbjct: 193 IDA--EVIALAVEFYRGMGLKNIKVVLNSLGDAASRQAHRDALIAHFEPRIGEFCSDCQS 250

Query: 451 --------VLDTIKNSSQDRINT-----GVLLGEGAFYGPK-----------FEYILKDA 486
                   +LD  K+ + + + T       L  + A Y  K           FE      
Sbjct: 251 RLEKNPLRILDCKKDRNHELMGTAPSITEYLNEDSAVYYEKVQELLTMMDVPFEKDPNLV 310

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHS--------EKCHPVMIHRAVFGSIERFIGIM 538
            G D+   T+    +    F A    S          E   P M       SIER I  +
Sbjct: 311 RGLDYYQHTVFEIMSEAEGFGAITTLSGGGRYNGLVQEIGGPEMPGIGFAMSIERLIMAL 370

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
            +     LP+    I   V  +   A ++A ++A  L+   L++E D+ +  +  + +  
Sbjct: 371 -KAENIELPIE-HSIDCYVVALGEKAKDHAAKVAFDLRKAGLAVEKDYLDRKMKAQFKSA 428

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              K   + + G+ E  +  I ++   +   ++V+L      + +
Sbjct: 429 DRLKAKFVAVLGEDELDKGIINLKDMATGEQEEVALDVFASYVAE 473


>gi|288931794|ref|YP_003435854.1| glycyl-tRNA synthetase [Ferroglobus placidus DSM 10642]
 gi|288894042|gb|ADC65579.1| glycyl-tRNA synthetase [Ferroglobus placidus DSM 10642]
          Length = 565

 Score = 66.3 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 18/97 (18%), Positives = 41/97 (42%), Gaps = 3/97 (3%)

Query: 549 WLSPIQAIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPII 606
           W++PI   V  +       + A EI  +L+ + +  E D    +I  + R      +P  
Sbjct: 453 WMAPIDVAVLPLLSREEFQKKALEIVEMLRENGIYTEYDDSG-SIGRRYRRFDEVGVPFC 511

Query: 607 IICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +    +   + ++ IR   +T   +V + + + +L +
Sbjct: 512 VTVDHQTFEDDTVTIRDRDTTKQVRVKVEELVGVLKE 548



 Score = 45.9 bits (107), Expect = 0.019,   Method: Composition-based stats.
 Identities = 44/265 (16%), Positives = 84/265 (31%), Gaps = 34/265 (12%)

Query: 335 ALKPMNCPGHVAVFNHGLKSYRE-LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
            L+P    G    F      +R+ LP  +A+ G  YRNE S    G++R+R F Q +   
Sbjct: 153 YLRPETAQGIFIAFKRLSNYFRDKLPFGVAQIGRAYRNEISPR-QGVIRLREFNQAELEF 211

Query: 394 FCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
           FC   E+   E  K  N ++++   F  E  +          +  + L        + +L
Sbjct: 212 FCHPGEKKHPEFYKYANDVVTLVDKFDKEHRVTLKEAVERGIIAHELLAYFIGKTRRFLL 271

Query: 453 DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG---TIQVDFNLPSRFNAF 509
           +      + R           +    ++     + G     G       D +  ++F+  
Sbjct: 272 EAGVKDEKLRFRQHKDDERAHYAVDCWDAEALTSYGWVEIVGIADRSDYDLSRHTKFSGE 331

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQ 569
            ++       P+ + R                           +   +  +     + A+
Sbjct: 332 DLSVFVPFKEPIKVKR-------------------------KKVVPNLAKLGPVYKDKAK 366

Query: 570 EIANLLKS---HHLSIETDFRNETI 591
           +IA  L+        IE     E I
Sbjct: 367 KIAEELEKIENAGDEIEVVVDGEKI 391


>gi|163791200|ref|ZP_02185617.1| seryl-tRNA synthetase [Carnobacterium sp. AT7]
 gi|159873531|gb|EDP67618.1| seryl-tRNA synthetase [Carnobacterium sp. AT7]
          Length = 427

 Score = 66.3 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 49/359 (13%), Positives = 111/359 (30%), Gaps = 51/359 (14%)

Query: 105 YYDFDKEQPF---SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEI 161
           +   DKE+     +++EL     ++   IA      +   + +   +      E  K   
Sbjct: 31  FVTLDKERRSLIVTTEELKSYRNEVSGAIAT---LKRSKANADDKIKEMREVGEKIKELD 87

Query: 162 LESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIY 221
            +     E +     G        P++          +   V    W             
Sbjct: 88  EQLAVIDEKIENIATG-------LPNLPHESVPVGADEEANVEIRKW------------- 127

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLIS 281
           GT      E   +    EE    D  + A+      +   G         G ++ + + +
Sbjct: 128 GTPLKVDFESKAHWEVAEELNILDFERGAKVSGSRFVYYKG--------LGARLERAVYN 179

Query: 282 YMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPM 339
           +M     +   Y E+ TP +++      +G +  ++ ++F ++  D T+         P 
Sbjct: 180 FMLDLHTEEHGYTEMMTPYLVNSDSMFGTGQFPKFKEDVFQIEGTDLTLI--------PT 231

Query: 340 NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCT 396
                   + + +    +LPV        +R+E   +     GL+R+  F + +   F  
Sbjct: 232 AEVPLTNYYRNEILKEEQLPVYFTALSPSFRSEAGSAGRDTRGLIRLHQFNKVEMVKFSK 291

Query: 397 KEQMFNECLKIHNLIISIYKDFGFEKI----MVKLSTRPEKRVGSDALWDDAENIMKGV 451
            E  ++E  K+ N   ++ +                     +     +W  A+   + +
Sbjct: 292 PETSYDELEKMTNNAEAVLQKLNLPYRVLALCTGDMGFSAAKTYDLEVWIPAQETYREI 350


>gi|154493963|ref|ZP_02033283.1| hypothetical protein PARMER_03308 [Parabacteroides merdae ATCC
           43184]
 gi|154086223|gb|EDN85268.1| hypothetical protein PARMER_03308 [Parabacteroides merdae ATCC
           43184]
          Length = 875

 Score = 66.3 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 59/156 (37%), Gaps = 13/156 (8%)

Query: 44  NGKVCDLSDPVREGSIEIITPEDPRSLAV---IRHSCAHIMAEAVQSIWPEVQVAIGPII 100
           N     L   + +      T +      +     HS  H++ EA++ +        G  +
Sbjct: 529 NNLPVHLVTKLPKDVTATFTAKINEKKRIQCECNHSATHLLHEALREVLGTHVEQKGSYV 588

Query: 101 E-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFL-KQYLSHEKARELFESKKEAYK 158
             D   +DF   Q  + +E+ ++EK + E I  + P    + +   +A+ L        K
Sbjct: 589 SPDSLRFDFSHFQKVTDEEIRKVEKLVSEKIRANYPLEEHRNMPIAEAKALGAMALFGEK 648

Query: 159 VEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQV 194
                     + V + + G   +LC G H+ +TG +
Sbjct: 649 Y--------GDEVRVVKYGNSIELCGGTHIPATGMI 676


>gi|260220448|emb|CBA27995.1| Seryl-tRNA synthetase [Curvibacter putative symbiont of Hydra
           magnipapillata]
          Length = 436

 Score = 66.3 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 41/223 (18%), Positives = 82/223 (36%), Gaps = 13/223 (5%)

Query: 242 EKRDHRKLAREMDL-FHIAEDGSGVIFWHRKG--WKIFQTLISYMRRKI--KDDYEEINT 296
           E +DH  L + + L F +    +G  F   KG   ++ + L  +M      +  Y E  T
Sbjct: 140 EVKDHVDLGQPLGLDFEMGVKLTGSRFTVMKGQIARLHRALAQFMLDTQTGEHGYTECYT 199

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCAD-DTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P +++    + +G    +  ++FA K    D   D     L P +           + + 
Sbjct: 200 PYIVNGDSLRGTGQLPKFEEDLFAAKKGGQDGGDDNTALYLIPTSEVPLTNFVRDVVSAE 259

Query: 356 RELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
            +LP++L      +R+E       + GL+R   F + +       E+ +     +     
Sbjct: 260 SDLPIKLTAHTPCFRSEAGSGGRDIRGLIRQHQFDKVEMVQIVHPEKSYEALEDMTRHAE 319

Query: 413 SIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
           +I +  G    ++ L T              +W  A+N  + +
Sbjct: 320 AILQKLGLPYRVMSLCTGDMGFGAAKTYDLEVWLPAQNTYREI 362


>gi|291060374|gb|ADD73109.1| alanyl-tRNA synthetase [Treponema pallidum subsp. pallidum str.
           Chicago]
          Length = 649

 Score = 66.3 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/139 (24%), Positives = 58/139 (41%), Gaps = 10/139 (7%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFSSDELAQIEK 124
           D  +     H+  H++ +A++ +        G  I  +   +DF   +P S+ E  Q+E+
Sbjct: 498 DHSAETTAYHTATHLLHQALRVVLGTHVQQKGSNITAERLRFDFSHPRPMSAQEKVQVEQ 557

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF-DLC 183
            + E I  D P   + +S E A           K E          V +Y  G +  ++C
Sbjct: 558 LVNEQIRADLPVCCEVMSLEDAMNSGAVALFGEKYE--------STVKVYSIGTFSREVC 609

Query: 184 RGPHVRSTGQVKKFFKLMK 202
            GPHV  TGQ+ +F    +
Sbjct: 610 GGPHVARTGQLGRFSIQKE 628


>gi|15640001|ref|NP_219454.1| alanyl-tRNA synthetase [Treponema pallidum subsp. pallidum str.
           Nichols]
 gi|189026240|ref|YP_001934012.1| alanyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14]
 gi|6094390|sp|O83980|SYA_TREPA RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|3323345|gb|AAC65968.1| alanyl-tRNA synthetase (alaS) [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189018815|gb|ACD71433.1| alanyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14]
          Length = 605

 Score = 66.3 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/139 (24%), Positives = 58/139 (41%), Gaps = 10/139 (7%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFSSDELAQIEK 124
           D  +     H+  H++ +A++ +        G  I  +   +DF   +P S+ E  Q+E+
Sbjct: 454 DHSAETTAYHTATHLLHQALRVVLGTHVQQKGSNITAERLRFDFSHPRPMSAQEKVQVEQ 513

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF-DLC 183
            + E I  D P   + +S E A           K E          V +Y  G +  ++C
Sbjct: 514 LVNEQIRADLPVCCEVMSLEDAMNSGAVALFGEKYE--------STVKVYSIGTFSREVC 565

Query: 184 RGPHVRSTGQVKKFFKLMK 202
            GPHV  TGQ+ +F    +
Sbjct: 566 GGPHVARTGQLGRFSIQKE 584


>gi|239825598|ref|YP_002948222.1| seryl-tRNA synthetase [Geobacillus sp. WCH70]
 gi|259511672|sp|C5D340|SYS_GEOSW RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|239805891|gb|ACS22956.1| seryl-tRNA synthetase [Geobacillus sp. WCH70]
          Length = 424

 Score = 66.3 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 42/244 (17%), Positives = 90/244 (36%), Gaps = 22/244 (9%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIF 276
           G +     E+ ++      S E + H  +A ++ +          GS  +F+   G ++ 
Sbjct: 115 GKSEEDNVEVRKWGEPRSFSFEPKPHWDIAEQLGILDFERAAKVTGSRFVFYKGLGARLE 174

Query: 277 QTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           + LI++M     +   Y+EI  P ++++     +G    +  + F ++  D        +
Sbjct: 175 RALINFMLDVHIEEFGYQEILPPYLVNRASMTGTGQLPKFEEDAFRIETDD--------Y 226

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDA 391
            L P        +    + S  +LP+    + + +R E   +     GL+R   F + + 
Sbjct: 227 FLIPTAEVPVTNLHRDEILSAEDLPIYYVAYSACFRAEAGSAGRDTRGLIRQHQFNKVEL 286

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENI 447
             F   E  ++E  K+ N    I +  G    +V L T              +W  +   
Sbjct: 287 VKFVKPEDSYDELEKLTNQAERILQLLGLPYRVVCLCTGDLGFSSAKTYDIEVWLPSYGT 346

Query: 448 MKGV 451
            + +
Sbjct: 347 YREI 350


>gi|83590480|ref|YP_430489.1| alanyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
 gi|123524268|sp|Q2RHZ3|SYA_MOOTA RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|83573394|gb|ABC19946.1| alanyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
          Length = 881

 Score = 66.3 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 41/251 (16%), Positives = 89/251 (35%), Gaps = 23/251 (9%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSS 116
            +EI    + R      H+  H++  A+++I  E     G  +  +   +DF    P + 
Sbjct: 551 EVEIAVDRERRQATARNHTVTHLLHRALKNILGEHVNQAGSLVTPERLRFDFTHFAPLTG 610

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
           +EL  +E ++ + I  + P      S+++A+ +  +     K          E V + + 
Sbjct: 611 EELRAVEAEVNQKILANLPVTTLETSYQEAKAMGATALFGEKY--------GERVRVVKI 662

Query: 177 GEW-FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
             +  +LC G H+ ST +   F  + +         +    +  + G A        +  
Sbjct: 663 DAYSMELCGGTHLGSTSEAGSFRLVSESGIG-----AGVRRVEAVTGAAALEMALQDRQE 717

Query: 236 YFLEES--EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEE 293
                   +    + + R   L    ++    +       ++   L SY   K+ D  +E
Sbjct: 718 LATIAGLLKVPPDQAIQRVRHLLEQNKENEREL------AQLRNELASYTIDKLLDRVQE 771

Query: 294 INTPQVLDQHL 304
           +    VL   +
Sbjct: 772 VAGVPVLPARV 782


>gi|257888112|ref|ZP_05667765.1| seryl-tRNA synthetase [Enterococcus faecium 1,141,733]
 gi|257824166|gb|EEV51098.1| seryl-tRNA synthetase [Enterococcus faecium 1,141,733]
          Length = 423

 Score = 66.3 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 40/244 (16%), Positives = 93/244 (38%), Gaps = 22/244 (9%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIF 276
           G+      E+ ++      + E + H ++A  +D+          GS  +++   G ++ 
Sbjct: 115 GSDEEDNVEIRRWSEPRTFAFEPKPHWEIAENLDILDFERGAKVAGSRFVYYKGLGARLE 174

Query: 277 QTLISYMRRK--IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           + + ++M  +   +  Y E+ TP +++      +G +  ++ ++F ++  D T+      
Sbjct: 175 RAVYNFMLDQHIYEHGYTEMITPYIVNSKAMFGTGQFPKFKEDVFQLENTDLTLI----- 229

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDA 391
              P         +N  +    +LPV        +R+E   +     GL+R+  F + + 
Sbjct: 230 ---PTAEVPLTNYYNDEILDGADLPVYFTALSPAFRSEAGSAGRDTRGLIRLHQFNKVEM 286

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENI 447
             F   E  + E  K+      I K       ++ LST              +W  A++ 
Sbjct: 287 VKFSDAEHSYEELEKMTADAEDILKKLHLPYRVMALSTGDMGFSAAKTYDLEVWIPAQDT 346

Query: 448 MKGV 451
            + +
Sbjct: 347 YREI 350


>gi|227550622|ref|ZP_03980671.1| serine--tRNA ligase [Enterococcus faecium TX1330]
 gi|227180246|gb|EEI61218.1| serine--tRNA ligase [Enterococcus faecium TX1330]
          Length = 422

 Score = 66.3 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 40/244 (16%), Positives = 93/244 (38%), Gaps = 22/244 (9%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIF 276
           G+      E+ ++      + E + H ++A  +D+          GS  +++   G ++ 
Sbjct: 115 GSDEEDNVEIRRWSEPRTFAFEPKPHWEIAENLDILDFERGAKVAGSRFVYYKGLGARLE 174

Query: 277 QTLISYMRRK--IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           + + ++M  +   +  Y E+ TP +++      +G +  ++ ++F ++  D T+      
Sbjct: 175 RAVYNFMLDQHIYEHGYTEMITPYIVNSKAMFGTGQFPKFKEDVFQLENTDLTLI----- 229

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDA 391
              P         +N  +    +LPV        +R+E   +     GL+R+  F + + 
Sbjct: 230 ---PTAEVPLTNYYNDEILDGADLPVYFTALSPAFRSEAGSAGRDTRGLIRLHQFNKVEM 286

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENI 447
             F   E  + E  K+      I K       ++ LST              +W  A++ 
Sbjct: 287 VKFSDAEHSYEELEKMTADAEDILKKLHLPYRVMALSTGDMGFSAAKTYDLEVWIPAQDT 346

Query: 448 MKGV 451
            + +
Sbjct: 347 YREI 350


>gi|194476552|ref|YP_002048731.1| seryl-tRNA synthetase [Paulinella chromatophora]
 gi|171191559|gb|ACB42521.1| seryl-tRNA synthetase [Paulinella chromatophora]
          Length = 426

 Score = 66.3 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/244 (14%), Positives = 79/244 (32%), Gaps = 20/244 (8%)

Query: 220 IYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDL----FHIAEDGSGVIFWHRKGWKI 275
             G       E   +    +E   ++H ++A ++ +      +    S  +    +G K+
Sbjct: 117 PNGKTEVDNVEQRCWGKPRQEVNLKNHWEIADKLGIIDTERSVRIAQSRFVTLIGQGAKL 176

Query: 276 FQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
            + LI++M     K  Y EI  P + + +    SG    +    F     D         
Sbjct: 177 ERALINFMLDFHTKKGYCEILPPILANTNSLTGSGQLPKFAEESFRCSEDD--------L 228

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDA 391
            L P +     ++    + +  +LP++   +   +R E         GL+R+  F + + 
Sbjct: 229 WLIPTSEVPITSLHRDEIIAADDLPLKYVAYSPCFRREAGSYGRDTRGLIRLHQFNKVEL 288

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKI----MVKLSTRPEKRVGSDALWDDAENI 447
           + F   +      ++I     ++ +                     R     +W    N 
Sbjct: 289 YWFSHPDDSDKAHIQITADAEAVLQALELPYRVLDLCTGDIGFSATRTYDLEVWLPGANA 348

Query: 448 MKGV 451
            + +
Sbjct: 349 YREI 352


>gi|78224711|ref|YP_386458.1| seryl-tRNA synthetase [Geobacter metallireducens GS-15]
 gi|123570656|sp|Q39PU1|SYS_GEOMG RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|78195966|gb|ABB33733.1| seryl-tRNA synthetase [Geobacter metallireducens GS-15]
          Length = 423

 Score = 66.3 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 67/189 (35%), Gaps = 17/189 (8%)

Query: 272 GWKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
           G ++ + LI++M     +   YEE   P ++++     +G    +  ++F +        
Sbjct: 168 GARLERALINFMLDLHTEKHGYEETLPPFMVNRESMTGTGQLPKFEEDLFHL-------- 219

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGF 386
           D   + L P        +    +    +LP+    +   +R E       + GL+R   F
Sbjct: 220 DGTDYYLIPTAEVPVTNIHRGEILKGSDLPLSYTAYTPCFRKEAGSYGKDVRGLIRQHQF 279

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWD 442
            + +   F      + E  ++      + +  G    +V+L T              +W 
Sbjct: 280 NKVELVKFTHPSTSYAELERLLANAEEVLRQLGLHYRVVELCTGDMGFSAAKTYDIEVWL 339

Query: 443 DAENIMKGV 451
            A++  + +
Sbjct: 340 PAQDTYREI 348


>gi|49482262|ref|YP_039486.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA252]
 gi|221141524|ref|ZP_03566017.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           JKD6009]
 gi|257424205|ref|ZP_05600634.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus 55/2053]
 gi|257426882|ref|ZP_05603284.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus 65-1322]
 gi|257429518|ref|ZP_05605905.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus 68-397]
 gi|257432165|ref|ZP_05608528.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus E1410]
 gi|257435126|ref|ZP_05611177.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876]
 gi|282907056|ref|ZP_06314904.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus Btn1260]
 gi|282910035|ref|ZP_06317843.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282912283|ref|ZP_06320079.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282912923|ref|ZP_06320715.1| serine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282922551|ref|ZP_06330241.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101]
 gi|283959493|ref|ZP_06376934.1| serine--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|293497976|ref|ZP_06665830.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus 58-424]
 gi|293511566|ref|ZP_06670260.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809]
 gi|293550175|ref|ZP_06672847.1| serine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|295429306|ref|ZP_06821928.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus EMRSA16]
 gi|297589192|ref|ZP_06947833.1| serine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|304379957|ref|ZP_07362686.1| serine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|56749429|sp|Q6GKT6|SYS_STAAR RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|49240391|emb|CAG39037.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA252]
 gi|257273223|gb|EEV05325.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus 55/2053]
 gi|257276513|gb|EEV07964.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus 65-1322]
 gi|257279999|gb|EEV10586.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus 68-397]
 gi|257283044|gb|EEV13176.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus E1410]
 gi|257285722|gb|EEV15838.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876]
 gi|269939535|emb|CBI47893.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus TW20]
 gi|282314772|gb|EFB45158.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101]
 gi|282323023|gb|EFB53342.1| serine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282323979|gb|EFB54295.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282326101|gb|EFB56406.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282329955|gb|EFB59476.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus Btn1260]
 gi|283789085|gb|EFC27912.1| serine--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|290919222|gb|EFD96298.1| serine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|291096907|gb|EFE27165.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus 58-424]
 gi|291465524|gb|EFF08056.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809]
 gi|295127065|gb|EFG56709.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus EMRSA16]
 gi|297577703|gb|EFH96416.1| serine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|302749920|gb|ADL64097.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           JKD6008]
 gi|304341537|gb|EFM07447.1| serine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|312436850|gb|ADQ75921.1| serine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH60]
 gi|315195235|gb|EFU25623.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS00]
 gi|329312733|gb|AEB87146.1| Seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus T0131]
          Length = 428

 Score = 66.3 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 53/342 (15%), Positives = 113/342 (33%), Gaps = 31/342 (9%)

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR-QGEWFD- 181
           K + EI+  D    K   + E+ +       E   ++      A + +   R  G+    
Sbjct: 26  KVVDEILELDEQRRKLISATEEMKARRNKVSEEIALKKRNKENADDVIAEMRTLGDDIKE 85

Query: 182 ---LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
                     + TG + +   L+         D +   + + +GT      E   +   +
Sbjct: 86  KDSQLNEIDSKMTGILCRIPNLISDDVPQGESDEDNVEVKK-WGTPREFSFEPKAHWDIV 144

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI--KDDYEEINT 296
           EE +  D  + A+      +             G ++ + L++YM  K   +  Y E+  
Sbjct: 145 EELKMADFDRAAKVSGARFVYLTNE--------GAQLERALMNYMITKHTTQHGYTEMMV 196

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           PQ+++      +G    +  ++F V        +       P         + + +    
Sbjct: 197 PQLVNADTMYGTGQLPKFEEDLFKV--------EKEGLYTIPTAEVPLTNFYRNEIIQPG 248

Query: 357 ELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
            LP +     + +R+E   +     GL+R+  F + +   F   E  +N   ++     +
Sbjct: 249 VLPEKFTGQSACFRSEAGSAGRDTRGLIRLHQFDKVEMVRFEQPEDSWNALEEMTTNAEA 308

Query: 414 IYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
           I ++ G     V L T              +W  + N  K +
Sbjct: 309 ILEELGLPYRRVILCTGDIGFSASKTYDLEVWLPSYNDYKEI 350


>gi|116626061|ref|YP_828217.1| anticodon-binding domain-containing protein [Candidatus Solibacter
           usitatus Ellin6076]
 gi|116229223|gb|ABJ87932.1| Anticodon-binding domain protein [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 480

 Score = 66.3 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 15/107 (14%), Positives = 40/107 (37%), Gaps = 4/107 (3%)

Query: 540 ENFKGNLPLWLSPIQAIV---TTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +     LP  ++P   +V       ++ +E A+ I     +  + +  D R+E    K +
Sbjct: 373 DKDGMALPAGVAPFDVVVSVAVAGDAAQMEAAERIYAECTAAGMDLLFDDRDERPGVKFK 432

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  +  +P  +  G K  +   + +    +     V +   +  + +
Sbjct: 433 DADLIGVPWRVTVGKK-IAGGLVELVERKTKVVTAVPIASVMEAIDQ 478


>gi|227879060|ref|ZP_03996950.1| histidyl-tRNA synthetase [Lactobacillus crispatus JV-V01]
 gi|256843054|ref|ZP_05548542.1| histidyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|256850294|ref|ZP_05555723.1| histidyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
 gi|262046027|ref|ZP_06018991.1| histidyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
 gi|293381308|ref|ZP_06627311.1| histidyl-tRNA synthetase [Lactobacillus crispatus 214-1]
 gi|227861355|gb|EEJ68984.1| histidyl-tRNA synthetase [Lactobacillus crispatus JV-V01]
 gi|256614474|gb|EEU19675.1| histidyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|256712931|gb|EEU27923.1| histidyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
 gi|260573986|gb|EEX30542.1| histidyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
 gi|290922124|gb|EFD99123.1| histidyl-tRNA synthetase [Lactobacillus crispatus 214-1]
          Length = 428

 Score = 66.3 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 60/407 (14%), Positives = 115/407 (28%), Gaps = 55/407 (13%)

Query: 276 FQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           +Q +    R      +Y EI TP       ++         + +   +  D   K  R  
Sbjct: 20  WQKVEETARNFFNRANYREIRTP---SFENYEIFARSSGDSSEIVEKQMYDFDDKGGRHI 76

Query: 335 ALKP--MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
           AL+P          V +         P  +    S +R E   +     R R F Q    
Sbjct: 77  ALRPEGTASVVRAYVEDKMYAPEVVKPFNVFYMESTFRYERPQA----GRQREFHQIGVE 132

Query: 393 VFCTKEQMFNECLKIHNL----------IISIYKDFGFEKIMVKLSTRPEKRVG--SDAL 440
            F +   + +    +                     G E++                D L
Sbjct: 133 SFGSSNPLSDVQTIMMGHDLLGELGVKNYQLHINTLGNEQVRQDYHDALVNYFTPLKDEL 192

Query: 441 WDDAENIMKG----VLDTIKNSSQDRINTGVLLGEGAFYGPK--------------FEYI 482
            +D++  ++     +LD+     +  +     + E      K               +Y+
Sbjct: 193 SEDSQRRLRDNPLRILDSKDERDKKFLPKAPKIREFLDDDSKANFEAILKMLDQLGIDYV 252

Query: 483 LKDAI--GRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           + D +  G D+  G I                      +    H     +      +   
Sbjct: 253 IDDDLVRGLDYYTGIIFEFMVEDKSLWESATTILGGGRYD---HLVEEFNGPATPAVGFG 309

Query: 541 NFKGNLPLWLSPIQAI----------VTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
             +  L L L                +T I     + A EIA  L++     + D   + 
Sbjct: 310 IGEERLMLVLKKQNPALFEKRGIDFFITNIGDGTAQKAIEIARSLRNQGFEADFDVNQKK 369

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
           +  + ++   +    +I  G+KE +   + I+R     T  +SL D 
Sbjct: 370 LKNQFKKADREGAKYVITLGEKELANGVLNIKRLADGKTIDLSLEDL 416


>gi|56696902|ref|YP_167264.1| alanyl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
 gi|81558517|sp|Q5LRU1|SYA_SILPO RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|56678639|gb|AAV95305.1| alanyl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
          Length = 890

 Score = 66.3 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/148 (20%), Positives = 58/148 (39%), Gaps = 5/148 (3%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFS 115
            ++E+      RS     HS  H++ EA++    +     G     D   +DF   +  +
Sbjct: 549 DAVELEVDHARRSAIRANHSATHLLHEALREALGDHVAQRGSLNAADRLRFDFSHAKALT 608

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYK----VEILESIPAKENV 171
             ELAQ+  ++   I ++S    + ++ + AR +        K    V ++    A+   
Sbjct: 609 EAELAQVGAEVNRFIRQNSRVETRIMTPDDARAIGAQALFGEKYGDEVRVVSMGRAETGK 668

Query: 172 TLYRQGEWFDLCRGPHVRSTGQVKKFFK 199
               +    +LC G HV  TG +  F  
Sbjct: 669 GADGKTWSIELCGGTHVAQTGDIGMFVL 696


>gi|261253947|ref|ZP_05946520.1| alanyl-tRNA synthetase [Vibrio orientalis CIP 102891]
 gi|260937338|gb|EEX93327.1| alanyl-tRNA synthetase [Vibrio orientalis CIP 102891]
          Length = 860

 Score = 66.3 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 58/143 (40%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFS 115
             +E +   + R+   + HS  H++  A++ +  E     G +++     +DF   +  +
Sbjct: 545 DEVEAVVDAERRAAISLNHSATHLLHAALRQVLGEHVAQKGSLVKPENLRFDFSNLEAVT 604

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
             EL ++E+ +   + R+       +  E A++         K          + V +  
Sbjct: 605 PAELKEVERLVNAQVRRNHVIETNIMDIESAKQKGAMALFGEKY--------DDEVRVLS 656

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            GE+  +LC G H  +TG +  F
Sbjct: 657 MGEFSTELCGGIHASNTGDIGLF 679


>gi|254173331|ref|ZP_04880004.1| histidyl-tRNA synthetase [Thermococcus sp. AM4]
 gi|214032740|gb|EEB73569.1| histidyl-tRNA synthetase [Thermococcus sp. AM4]
          Length = 435

 Score = 66.3 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/189 (19%), Positives = 68/189 (35%), Gaps = 18/189 (9%)

Query: 448 MKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFN 507
           +  +L+    S   RI+ G+  G   +    FE I  + +G     G  + D NL   F 
Sbjct: 248 LVDLLEAYGVSKWIRIDLGIARGFDYYTSVVFEAIAPNDLGIGSIGGGGRYD-NLIEVFG 306

Query: 508 AFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP-LWLSPIQAIVTTITSSAV- 565
                       P        G  ER I I+   +KG +P + L P    V  I      
Sbjct: 307 ----------GKPTPATGFAIGV-ERLIPIL--EWKGLIPEIKLRPD-VYVIPIGKEVEL 352

Query: 566 -EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRF 624
            + A E+ + L+   +  + +     +   +       +P +++ G ++    ++ IR  
Sbjct: 353 RKTAVEVVSALRRAGVKADVELTGRKLRKALDYAGRLNVPYVVLIGKRDLENGNVTIRDM 412

Query: 625 GSTTTQKVS 633
            +   + V 
Sbjct: 413 ETGEQKVVK 421


>gi|88607771|ref|YP_505615.1| alanyl-tRNA synthetase [Anaplasma phagocytophilum HZ]
 gi|123494530|sp|Q2GJ36|SYA_ANAPZ RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|88598834|gb|ABD44304.1| alanyl-tRNA synthetase [Anaplasma phagocytophilum HZ]
          Length = 876

 Score = 66.3 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/141 (21%), Positives = 57/141 (40%), Gaps = 8/141 (5%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSD 117
           +E +  +  R      HS  HI+   ++++  E     G  +  D   +DF    P + +
Sbjct: 552 VEAVVDKQRREKLRANHSATHILQSVLRTLIGEGIQQKGSLVAADKLRFDFSHALPLTKE 611

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +L  +E ++   I  + P +  + S E A +          + +       +NV +   G
Sbjct: 612 QLRTVEMEVNRQIMANQPVIIDHCSLEDAVQEGA-------IALFGEKYNDQNVRVVSMG 664

Query: 178 EWFDLCRGPHVRSTGQVKKFF 198
              +LC G HVR TG +  F 
Sbjct: 665 SSKELCGGTHVRFTGDIGAFR 685


>gi|322370889|ref|ZP_08045444.1| histidyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
 gi|320549566|gb|EFW91225.1| histidyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
          Length = 432

 Score = 66.3 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 65/431 (15%), Positives = 131/431 (30%), Gaps = 78/431 (18%)

Query: 269 HRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
           + + W  ++ ++  +    ++  + EI+ P V    L++          +    +     
Sbjct: 14  YPEEWAAWREIVDTVEETAREFGFREIDAPSVEPTDLFRVKS------GDEIVEQTYSFE 67

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYREL--PVRLAEFGSVYRNEPSGSLHGLMRVRG 385
            K  R         P      +  ++  ++L  P++  +    +R E         R R 
Sbjct: 68  DKGGREV----TLIPEQTPTRSRLVQQRKDLGTPIKWFDTSKRWRYEAVQK----GRDRE 119

Query: 386 FTQDDAHVF------CTKEQMFNECLKIHNLIISIYKDFGFEKI---------MVKLSTR 430
           F Q D  +F         E +         L ++   +F              M    ++
Sbjct: 120 FFQTDIDIFGVESVEADAEIIACAATIYEKLGVADAVEFRLNDRQLLDALLKAMDVEGSK 179

Query: 431 PEKRVGSDALWDDAENIMKGV-LDTIKNSSQDRINTG-----------VLLGEGAFYGPK 478
              RV         E  +  + L+ +  ++ + I+             V L + A  G  
Sbjct: 180 DVMRVIDKKEKLSREEFLDNLELEGVDRATAEEIDELTAISGEMESALVELSDKAPEGDA 239

Query: 479 FEYILKDAIGRDWQCGTI--QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
            +    DAI R      +    D      F+   V         V    +  G +    G
Sbjct: 240 AD----DAIERMHDLYDVLSAYDVEDMCTFDLSIVRGMDYYTGLVFEAFSTEGDLRALFG 295

Query: 537 -----IMIENFK-----------------------GNLPLWLSPIQAIVTTITSSAVEYA 568
                 +IE F                        G  P       A V TI+ S  E  
Sbjct: 296 GGRYDHLIEQFGSREVPAIGFAFGYSTTMHLLKKLGEWPDEALSTDAYVLTISDSVREIG 355

Query: 569 QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
            E A  L+S  L++ETD    ++  +            ++ G+++ +E  + ++   S  
Sbjct: 356 LEYAKGLRSAGLTVETDLTGRSVGEQFGYADRINAEYTVVVGERDLNEGVVTVQNMDSGE 415

Query: 629 TQKVSLLDAIP 639
            ++V   + + 
Sbjct: 416 EEQVPKNEVVE 426


>gi|229542248|ref|ZP_04431308.1| seryl-tRNA synthetase [Bacillus coagulans 36D1]
 gi|229326668|gb|EEN92343.1| seryl-tRNA synthetase [Bacillus coagulans 36D1]
          Length = 424

 Score = 66.3 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/244 (15%), Positives = 90/244 (36%), Gaps = 22/244 (9%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIF 276
           G +     E+ ++        E + H  +A ++ +          GS  +F+   G ++ 
Sbjct: 115 GDSEEDNVEIRKWGEVPAFGFEPKPHWDIATDLGILDFERAAKVTGSRFVFYKGLGARLE 174

Query: 277 QTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           + L ++M     +   YEE+  P ++++     +G    +  + F V        + + +
Sbjct: 175 RALYNFMLDLHVEEHGYEEVLPPYMVNRASMTGTGQLPKFEEDAFLV--------NEKDY 226

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDA 391
            L P             + +  +LP+    F + +R+E   +     GL+R   F + + 
Sbjct: 227 FLIPTAEVPVTNYHRDEILNGDDLPINYVAFSACFRSEAGSAGRDTRGLIRQHQFNKVEL 286

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENI 447
             F   E  +NE  K+      + +  G    ++ + T              +W  ++++
Sbjct: 287 VKFVKPEDSYNELEKLTGHAEKVLQLLGLPYHVMSMCTADLGFTAAKKYDIEVWMPSQHV 346

Query: 448 MKGV 451
            + +
Sbjct: 347 YREI 350


>gi|257896269|ref|ZP_05675922.1| seryl-tRNA synthetase [Enterococcus faecium Com12]
 gi|293379350|ref|ZP_06625494.1| serine--tRNA ligase [Enterococcus faecium PC4.1]
 gi|257832834|gb|EEV59255.1| seryl-tRNA synthetase [Enterococcus faecium Com12]
 gi|292641873|gb|EFF60039.1| serine--tRNA ligase [Enterococcus faecium PC4.1]
          Length = 423

 Score = 66.3 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 40/244 (16%), Positives = 93/244 (38%), Gaps = 22/244 (9%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIF 276
           G+      E+ ++      + E + H ++A  +D+          GS  +++   G ++ 
Sbjct: 115 GSDEEDNVEIRRWSEPRTFAFEPKPHWEIAENLDILDFERGAKVAGSRFVYYKGLGARLE 174

Query: 277 QTLISYMRRK--IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           + + ++M  +   +  Y E+ TP +++      +G +  ++ ++F ++  D T+      
Sbjct: 175 RAVYNFMLDQHIYEHGYTEMITPYIVNSKAMFGTGQFPKFKEDVFQLENTDLTLI----- 229

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDA 391
              P         +N  +    +LPV        +R+E   +     GL+R+  F + + 
Sbjct: 230 ---PTAEVPLTNYYNDEILDGADLPVYFTALSPAFRSEAGSAGRDTRGLIRLHQFNKVEM 286

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENI 447
             F   E  + E  K+      I K       ++ LST              +W  A++ 
Sbjct: 287 VKFSDAEHSYEELEKMTADAEDILKKLHLPYRVMALSTGDMGFSAAKTYDLEVWIPAQDT 346

Query: 448 MKGV 451
            + +
Sbjct: 347 YREI 350


>gi|256544610|ref|ZP_05471982.1| histidine--tRNA ligase [Anaerococcus vaginalis ATCC 51170]
 gi|256399499|gb|EEU13104.1| histidine--tRNA ligase [Anaerococcus vaginalis ATCC 51170]
          Length = 432

 Score = 66.3 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 32/86 (37%)

Query: 556 IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEAS 615
           +V  +      YA +IAN LK   L ++    +     KI       +  ++I G +E  
Sbjct: 347 LVIPMDEKLNFYAIDIANKLKEQGLKVDIYLEDGKFKKKINYADKIGVKKVLIIGQEEYE 406

Query: 616 ERSIGIRRFGSTTTQKVSLLDAIPIL 641
            + + ++         V + +    L
Sbjct: 407 NKMVSVKNMEDGKQVSVKVEEIREYL 432


>gi|86134548|ref|ZP_01053130.1| Alanyl-tRNA synthetase [Polaribacter sp. MED152]
 gi|85821411|gb|EAQ42558.1| Alanyl-tRNA synthetase [Polaribacter sp. MED152]
          Length = 873

 Score = 66.3 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/191 (17%), Positives = 68/191 (35%), Gaps = 13/191 (6%)

Query: 56  EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGF-YYDFDKEQPF 114
           + + + +  E  R      H+  H++ +A++ +        G  +   +  +DF      
Sbjct: 544 DANFKAVVDEKQRYRTECNHTATHLLHQALREVLGTHVEQKGSAVHSKYLRFDFSHFSKL 603

Query: 115 SSDELAQIEKKMQEIIARDSPFLK-QYLSHEKARELFESKKEAYKVEILESIPAKENVTL 173
           +++EL  +E  +   I+   P  + + ++ EKA           K          + V  
Sbjct: 604 TTEELQDVENFVNARISGKLPLEESRNITMEKAIADGAMALFGEKY--------GDTVRA 655

Query: 174 YRQGEWFDLCRGPHVRSTGQVKKFFKLMK---VAGAYWRGDSNRPMLSRIYGTAWNTQQE 230
            + G+  +LC G HV++TG +  F    +    AG           +   Y     T  E
Sbjct: 656 IKFGKSIELCGGTHVKNTGDIWHFKIKSEGAVAAGIRRIEAITNDAVKDFYFDNNRTLFE 715

Query: 231 LTQYLYFLEES 241
           +   L   +  
Sbjct: 716 IKDLLNNTKNP 726


>gi|295695750|ref|YP_003588988.1| alanyl-tRNA synthetase [Bacillus tusciae DSM 2912]
 gi|295411352|gb|ADG05844.1| alanyl-tRNA synthetase [Bacillus tusciae DSM 2912]
          Length = 878

 Score = 66.3 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 59/128 (46%), Gaps = 10/128 (7%)

Query: 72  VIRHSCAHIMAEAVQSIWPEVQVAIGPIIED-GFYYDFDKEQPFSSDELAQIEKKMQEII 130
           +  H+  H++ +A++ +  E     G ++ D    +DF    P + +EL  +E+ + E I
Sbjct: 556 IKNHTATHLLHKALREVLGEHVAQAGSLVADSRLRFDFSHYGPLAPEELEAVERVVNEEI 615

Query: 131 ARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVR 189
            R+ P   + +  ++A+ +        K          E V + + G++  +LC G HVR
Sbjct: 616 WRNEPVDIREMPLDEAKAMGAMALFGEKY--------GERVRVVKAGDFSIELCGGCHVR 667

Query: 190 STGQVKKF 197
            T ++  F
Sbjct: 668 RTSEIGVF 675


>gi|288871667|ref|ZP_06118467.2| alanine--tRNA ligase [Clostridium hathewayi DSM 13479]
 gi|288862560|gb|EFC94858.1| alanine--tRNA ligase [Clostridium hathewayi DSM 13479]
          Length = 813

 Score = 66.3 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 57/126 (45%), Gaps = 10/126 (7%)

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIAR 132
            HS  H++ +A++++  E     G  + ED   +DF      + +E+ ++E  + E I  
Sbjct: 554 NHSATHLLQKALRTVLGEHVEQAGSYVDEDRLRFDFTHFSAMTPEEIKKVECLVNEKIKE 613

Query: 133 DSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRST 191
                 + +S ++A++         K          ENV + + G++  +LC G H+ +T
Sbjct: 614 ALNVKTEVMSLDEAKKSGAMALFGEKY--------GENVRVVKMGDFSTELCGGTHISNT 665

Query: 192 GQVKKF 197
           G +  F
Sbjct: 666 GVIGSF 671


>gi|261339231|ref|ZP_05967089.1| hypothetical protein ENTCAN_05465 [Enterobacter cancerogenus ATCC
           35316]
 gi|288319086|gb|EFC58024.1| serine--tRNA ligase [Enterobacter cancerogenus ATCC 35316]
          Length = 430

 Score = 66.3 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 43/244 (17%), Positives = 82/244 (33%), Gaps = 15/244 (6%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLA--REMDLFHIAEDGSGVIFWHRKG--WKIF 276
           G   N   E+ ++    E   E RDH  L        F  A   +G  F   KG    + 
Sbjct: 114 GKDENDNVEVKRWGTPREFDFEVRDHVTLGEMHAGLDFAAAVKLTGSRFVVMKGQIAHLH 173

Query: 277 QTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           + L  +M     +   Y E   P +++      +G    +  ++F  +  D+   D   +
Sbjct: 174 RALAQFMLDLHTEQHGYSETYVPYLVNHDTLYGTGQLPKFAGDLFHTRPLDEEA-DSSNY 232

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDA 391
           AL P        +    +    +LP++L      +R+E         GL+R+  F + + 
Sbjct: 233 ALIPTAEVPLTNLVRDEIIDEDDLPIKLTAHSPCFRSEAGSYGRDTRGLIRMHQFDKVEM 292

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENI 447
                 E   +   ++      + +  G     + L T              +W  A+N 
Sbjct: 293 VQIVRPEDSMDALEEMTGHAEKVLELLGLPYRRMALCTGDMGFGACKTFDLEVWVPAQNT 352

Query: 448 MKGV 451
            + +
Sbjct: 353 YREI 356


>gi|257899256|ref|ZP_05678909.1| seryl-tRNA synthetase [Enterococcus faecium Com15]
 gi|257837168|gb|EEV62242.1| seryl-tRNA synthetase [Enterococcus faecium Com15]
          Length = 423

 Score = 66.3 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 40/244 (16%), Positives = 93/244 (38%), Gaps = 22/244 (9%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIF 276
           G+      E+ ++      + E + H ++A  +D+          GS  +++   G ++ 
Sbjct: 115 GSDEEDNVEIRRWSEPRTFAFEPKPHWEIAENLDILDFERGAKVAGSRFVYYKGLGARLE 174

Query: 277 QTLISYMRRK--IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           + + ++M  +   +  Y E+ TP +++      +G +  ++ ++F ++  D T+      
Sbjct: 175 RAVYNFMLDQHIYEHGYTEMITPYIVNSKAMFGTGQFPKFKEDVFQLENTDLTLI----- 229

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDA 391
              P         +N  +    +LPV        +R+E   +     GL+R+  F + + 
Sbjct: 230 ---PTAEVPLTNYYNDEILDGADLPVYFTALSPAFRSEAGSAGRDTRGLIRLHQFNKVEM 286

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENI 447
             F   E  + E  K+      I K       ++ LST              +W  A++ 
Sbjct: 287 VKFSDAEHSYEELEKMTADAEDILKKLHLPYRVMALSTGDMGFSAAKTYDLEVWIPAQDT 346

Query: 448 MKGV 451
            + +
Sbjct: 347 YREI 350


>gi|293572385|ref|ZP_06683367.1| seryl-tRNA synthetase [Enterococcus faecium E980]
 gi|291607545|gb|EFF36885.1| seryl-tRNA synthetase [Enterococcus faecium E980]
          Length = 423

 Score = 66.0 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 40/244 (16%), Positives = 93/244 (38%), Gaps = 22/244 (9%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIF 276
           G+      E+ ++      + E + H ++A  +D+          GS  +++   G ++ 
Sbjct: 115 GSDEEDNVEIRRWSEPRTFAFEPKPHWEIAENLDILDFERGAKVAGSRFVYYKGLGARLE 174

Query: 277 QTLISYMRRK--IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           + + ++M  +   +  Y E+ TP +++      +G +  ++ ++F ++  D T+      
Sbjct: 175 RAVYNFMLDQHIYEHGYTEMITPYIVNSKAMFGTGQFPKFKEDVFQLENTDLTLI----- 229

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDA 391
              P         +N  +    +LPV        +R+E   +     GL+R+  F + + 
Sbjct: 230 ---PTAEVPLTNYYNDEILDGADLPVYFTALSPAFRSEAGSAGRDTRGLIRLHQFNKVEM 286

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENI 447
             F   E  + E  K+      I K       ++ LST              +W  A++ 
Sbjct: 287 VKFSDAEHSYEELEKMTADAEDILKKLHLPYRVMALSTGDMGFSAAKTYDLEVWIPAQDT 346

Query: 448 MKGV 451
            + +
Sbjct: 347 YREI 350


>gi|167758103|ref|ZP_02430230.1| hypothetical protein CLOSCI_00441 [Clostridium scindens ATCC 35704]
 gi|167664000|gb|EDS08130.1| hypothetical protein CLOSCI_00441 [Clostridium scindens ATCC 35704]
          Length = 879

 Score = 66.0 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 56/143 (39%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFS 115
               +    D R L+   HS  H++ +A++ +        G  +  D   +DF      +
Sbjct: 548 DKAALEVDTDNRMLSANNHSATHLLHKALRMVLGNHVEQAGSSVNADRLRFDFTHFSALT 607

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            +EL ++E  + E I        Q +  E+A++   +     K   +        V +  
Sbjct: 608 EEELKKVEAIVNEQIMNCLNVKVQNMPIEEAKKTGAAALFGEKYGSI--------VRVVS 659

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G++  + C G HV +TG +  F
Sbjct: 660 MGDFSIEFCGGTHVANTGVITAF 682


>gi|218899572|ref|YP_002447983.1| histidyl-tRNA synthetase [Bacillus cereus G9842]
 gi|228902931|ref|ZP_04067072.1| Histidyl-tRNA synthetase 2 [Bacillus thuringiensis IBL 4222]
 gi|228960677|ref|ZP_04122321.1| Histidyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|228967479|ref|ZP_04128507.1| Histidyl-tRNA synthetase 2 [Bacillus thuringiensis serovar sotto
           str. T04001]
 gi|218545625|gb|ACK98019.1| histidyl-tRNA synthetase [Bacillus cereus G9842]
 gi|228792194|gb|EEM39768.1| Histidyl-tRNA synthetase 2 [Bacillus thuringiensis serovar sotto
           str. T04001]
 gi|228798983|gb|EEM45956.1| Histidyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|228856715|gb|EEN01234.1| Histidyl-tRNA synthetase 2 [Bacillus thuringiensis IBL 4222]
          Length = 423

 Score = 66.0 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 72/413 (17%), Positives = 139/413 (33%), Gaps = 55/413 (13%)

Query: 275 IFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           ++Q +    R   +  +Y+EI TP        +          ++   +      +  R+
Sbjct: 19  LWQYIEGQAREICRRYNYKEIRTPIF---EHTELFLRGVGDTTDIVQKEMYSFQDRGERS 75

Query: 334 FALKPM-NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
             L+P    P   +   + +      P +L   G ++R E   +     R R F Q    
Sbjct: 76  LTLRPEGTAPVVRSYVENKMFGDATQPTKLYYIGQMFRYERPQA----GRYRQFVQFGIE 131

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKI---MVKLSTRPEKRVGSDALWDDAENIMK 449
              + +   +   ++  L +  Y+  G + I   +  L     ++   DAL    E  + 
Sbjct: 132 AIGSNDPAIDA--EVIALAVEFYRGMGLKNIKVVLNSLGDAASRQAHRDALIAHFEPRIG 189

Query: 450 G---------------VLDTIKNSSQDRINT-----GVLLGEGAFYGPK----------- 478
                           +LD  K+ + + + T       L  + A Y  K           
Sbjct: 190 EFCSDCQSRLEKNPLRILDCKKDRNHELMGTAPSITEYLNEDSAVYYDKVQELLTMMDVP 249

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS--------EKCHPVMIHRAVFGS 530
           FE       G D+   T+    +    F A    S          E   P M       S
Sbjct: 250 FEKDPNLVRGLDYYQHTVFEIMSEAEGFGAITTLSGGGRYNGLVQEIGGPEMPGIGFAMS 309

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
           IER I  + +     LPL    I   V  +   A ++A ++A  L+   LS+E D+ +  
Sbjct: 310 IERLIMAL-KAENIELPLE-HSIDCYVVALGEKAKDHAAKVAFNLRKAGLSVEKDYLDRK 367

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  + +     K   + + G+ E  +  I ++   +   ++V+L      + +
Sbjct: 368 MKAQFKSADRLKAKFVAVLGEDELDKGIINLKDMATGEQEEVALDVFASYVAE 420


>gi|30022479|ref|NP_834110.1| histidyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|218233653|ref|YP_002369213.1| histidyl-tRNA synthetase [Bacillus cereus B4264]
 gi|229048113|ref|ZP_04193684.1| Histidyl-tRNA synthetase 2 [Bacillus cereus AH676]
 gi|229111876|ref|ZP_04241422.1| Histidyl-tRNA synthetase 2 [Bacillus cereus Rock1-15]
 gi|229129684|ref|ZP_04258652.1| Histidyl-tRNA synthetase 2 [Bacillus cereus BDRD-Cer4]
 gi|229146975|ref|ZP_04275337.1| Histidyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST24]
 gi|229152607|ref|ZP_04280796.1| Histidyl-tRNA synthetase 2 [Bacillus cereus m1550]
 gi|296504896|ref|YP_003666596.1| histidyl-tRNA synthetase [Bacillus thuringiensis BMB171]
 gi|39932340|sp|Q817X7|SYH2_BACCR RecName: Full=Histidyl-tRNA synthetase 2; AltName:
           Full=Histidine--tRNA ligase 2; Short=HisRS 2
 gi|29898037|gb|AAP11311.1| Histidyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|218161610|gb|ACK61602.1| histidine--tRNA ligase [Bacillus cereus B4264]
 gi|228630868|gb|EEK87508.1| Histidyl-tRNA synthetase 2 [Bacillus cereus m1550]
 gi|228636472|gb|EEK92940.1| Histidyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST24]
 gi|228653801|gb|EEL09671.1| Histidyl-tRNA synthetase 2 [Bacillus cereus BDRD-Cer4]
 gi|228671632|gb|EEL26930.1| Histidyl-tRNA synthetase 2 [Bacillus cereus Rock1-15]
 gi|228723216|gb|EEL74590.1| Histidyl-tRNA synthetase 2 [Bacillus cereus AH676]
 gi|296325948|gb|ADH08876.1| histidyl-tRNA synthetase [Bacillus thuringiensis BMB171]
          Length = 423

 Score = 66.0 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 72/413 (17%), Positives = 139/413 (33%), Gaps = 55/413 (13%)

Query: 275 IFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           ++Q +    R   +  +Y+EI TP        +          ++   +      +  R+
Sbjct: 19  LWQYIEGQAREICRRYNYKEIRTPIF---EHTELFLRGVGDTTDIVQKEMYSFQDRGERS 75

Query: 334 FALKPM-NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
             L+P    P   +   + +      P +L   G ++R E   +     R R F Q    
Sbjct: 76  LTLRPEGTAPVVRSYVENKMFGDATQPTKLYYIGQMFRYERPQA----GRYRQFVQFGIE 131

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKI---MVKLSTRPEKRVGSDALWDDAENIMK 449
              + +   +   ++  L +  Y+  G + I   +  L     ++   DAL    E  + 
Sbjct: 132 AIGSNDPAIDA--EVIALAVEFYRGMGLKNIKVVLNSLGDAASRQAHRDALIAHFEPRIG 189

Query: 450 G---------------VLDTIKNSSQDRINT-----GVLLGEGAFYGPK----------- 478
                           +LD  K+ + + + T       L  + A Y  K           
Sbjct: 190 EFCSDCQSRLEKNPLRILDCKKDRNHELMGTAPSITEYLNEDSAVYYDKVQELLTMMDVP 249

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS--------EKCHPVMIHRAVFGS 530
           FE       G D+   T+    +    F A    S          E   P M       S
Sbjct: 250 FEKDPNLVRGLDYYQHTVFEIMSEAEGFGAITTLSGGGRYNGLVQEIGGPEMPGIGFAMS 309

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
           IER I  + +     LPL    I   V  +   A ++A ++A  L+   LS+E D+ +  
Sbjct: 310 IERLIMAL-KAENIELPLE-HSIDCYVVALGEKAKDHAAKVAFDLRKAGLSVEKDYLDRK 367

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  + +     K   + + G+ E  +  I ++   +   ++V+L      + +
Sbjct: 368 MKAQFKSADRLKAKFVAVLGEDELDKGIINLKDMATGEQEEVALDVFASYVAE 420


>gi|225026503|ref|ZP_03715695.1| hypothetical protein EUBHAL_00752 [Eubacterium hallii DSM 3353]
 gi|224956191|gb|EEG37400.1| hypothetical protein EUBHAL_00752 [Eubacterium hallii DSM 3353]
          Length = 867

 Score = 66.0 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/143 (21%), Positives = 64/143 (44%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFS 115
            ++ +   +  R+     HS  H++ ++++++        G  + +D   +DF   Q  +
Sbjct: 537 DTVTLSVNKAQRADTAKGHSATHLLQKSLRTVLGNHVEQSGSYVDKDRLRFDFSHFQALT 596

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           ++ELA++EK + E IA D     + +S ++A+          K          + V +  
Sbjct: 597 AEELAEVEKMVNEKIAEDLTVSTEIMSVDEAKNTGAMALFGEKY--------GDKVRVVT 648

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G++  + C G HV  TG +K F
Sbjct: 649 MGDFSKEFCAGTHVPHTGVIKAF 671


>gi|288924620|ref|ZP_06418557.1| glycine--tRNA ligase [Prevotella buccae D17]
 gi|315607503|ref|ZP_07882498.1| glycyl-tRNA synthetase beta subunit [Prevotella buccae ATCC 33574]
 gi|288338407|gb|EFC76756.1| glycine--tRNA ligase [Prevotella buccae D17]
 gi|315250686|gb|EFU30680.1| glycyl-tRNA synthetase beta subunit [Prevotella buccae ATCC 33574]
          Length = 523

 Score = 66.0 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 55/345 (15%), Positives = 109/345 (31%), Gaps = 53/345 (15%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+                 L+P    G    + +  K+   +LP  +A+ G  +RNE  
Sbjct: 194 FNLMFSTEMGSLSDATNKIYLRPETAQGIFVNYLNVQKTGRMKLPFGIAQIGKAFRNEIV 253

Query: 375 GSLHGLMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
            +   + R+R F Q +   FC    E  + E  K   L        G E        +  
Sbjct: 254 -ARQFVFRMREFEQMEMQFFCQPGTEMKWFEYWKKVRLAWHETLGMGKENYRFHDHEKLA 312

Query: 433 KRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
                    + A +I            + ++  G    EG      F+            
Sbjct: 313 HYA------NAATDI------------EFKMPFGFKEVEGIHSRTDFD------------ 342

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK--------- 543
              +        R   ++    +E   P  +  ++ G    F+ ++  +++         
Sbjct: 343 ---LSQHEKYSGRSIKYFDPDKNESYTPYDVETSI-GVDRMFLSVLCHSYEEEQLENGET 398

Query: 544 ---GNLPLWLSPIQAIVTTITSSAV--EYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
                LP  L+P++  V  +       E AQEI + LK H  +   D ++ +I  + R  
Sbjct: 399 RVVLKLPEALAPVKCAVFPLDKKDGLPELAQEIVDDLKFHFNTHYGDPKD-SIGKRYRRQ 457

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
                P  +       ++  + +R   +   ++V +     I+  
Sbjct: 458 DAVGTPFCVTVDHDTPNDHKVTLRFRDTMEQERVDISQLRSIIED 502


>gi|227529956|ref|ZP_03960005.1| histidine--tRNA ligase [Lactobacillus vaginalis ATCC 49540]
 gi|227350141|gb|EEJ40432.1| histidine--tRNA ligase [Lactobacillus vaginalis ATCC 49540]
          Length = 425

 Score = 66.0 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 69/432 (15%), Positives = 140/432 (32%), Gaps = 73/432 (16%)

Query: 270 RKGWK--------IFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            KG          +++ +    R       Y  I TP       +          +++  
Sbjct: 6   PKGTADLLPGTTNLWEKVEKVAREVFDQFGYRGIRTPMF---EDYNVFSRNVGDTSDIVE 62

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVF--NHGLKSYRELPVRLAEFGSVYRNEPSGSLH 378
            +  D   K  R  AL+P    G V  +  N         P ++   G ++R E   S  
Sbjct: 63  KEMYDFHDKGDRHIALRPEGTAGVVRAYVENKLYGPEYPKPYKVYYMGPMFRYERPQS-- 120

Query: 379 GLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD 438
              R R F Q    V     +     +++  + + ++K FG   + + ++T  +K+V  D
Sbjct: 121 --GRQREFHQIG--VEALNNESPQIDVEVIAMAMQLFKRFGVPNVKLTINTLGDKQVRED 176

Query: 439 ALWDDAENIMKGVLDTIKNSSQDRI------------------------NTGVLLGEGAF 474
              +   N +K   D + + SQ+R+                            L  E   
Sbjct: 177 YR-EALINFLKPHYDELSSDSQERMYRNPLRVLDSKDAGDQKIVAQAPSILDYLDEESQN 235

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH-------------------- 514
           Y  + + +LK+ +G D++  T  V          F + S                     
Sbjct: 236 YFDQVQSLLKE-LGIDYEIDTNMVRGLDYYNHTIFEIMSDSPVFGGGYTTVCAGGRYNGL 294

Query: 515 -SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQ--AIVTTITSSAVEYAQEI 571
            ++   P          +ER + ++ +      P +    Q      +   +    A +I
Sbjct: 295 INQLGGPEEGGIGFGMGVERLMLLLQQEN----PEFAPQDQLDVFFASANEAGDNLAFKI 350

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
            N ++   +  + D+    +  +I+E   +      + G++E  E    ++   +  T  
Sbjct: 351 LNQIRDKGVVADKDYSGVKVGKQIKEAFRRNAKYFAVFGEREVDEGQFQLKNAATKDTVD 410

Query: 632 VSLLDAIPILTK 643
           V + D +   TK
Sbjct: 411 VKIADFVAEPTK 422


>gi|149178839|ref|ZP_01857419.1| alanyl-tRNA synthetase [Planctomyces maris DSM 8797]
 gi|148842314|gb|EDL56697.1| alanyl-tRNA synthetase [Planctomyces maris DSM 8797]
          Length = 875

 Score = 66.0 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/156 (23%), Positives = 73/156 (46%), Gaps = 11/156 (7%)

Query: 50  LSDPVREGSIEIITPEDPRSLAVIR-HSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYD 107
           L+  + +G     T  +PR   + R HS  H++  A+ ++  E  +  G  + ED   +D
Sbjct: 534 LTGKLEQGQTLTATVTEPRRSGIQRAHSATHLLHHALHTVLGENAMQRGSKVEEDTLRFD 593

Query: 108 FDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPA 167
           F   +  + +E+++IE  + + ++  +P   + +  +KAREL        K         
Sbjct: 594 FSHSKAVTPEEISRIEDIINQRVSEGAPVTTELMKLQKARELGAMALFGEKY-------- 645

Query: 168 KENVTLYRQGEW-FDLCRGPHVRSTGQVKKFFKLMK 202
            + V + + G++  +LC G H+ +TGQV     + +
Sbjct: 646 PDYVRVVQMGDFSTELCGGTHLSNTGQVGLCKIINE 681


>gi|78485113|ref|YP_391038.1| seryl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
 gi|123755256|sp|Q31HK9|SYS_THICR RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|78363399|gb|ABB41364.1| seryl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
          Length = 428

 Score = 66.0 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 62/187 (33%), Gaps = 8/187 (4%)

Query: 273 WKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
            K+ + L  +M        YEE+  P +++Q     +G    + A+++ +   ++     
Sbjct: 170 AKLQRALTQFMLDSHTDAGYEEVYVPFLVNQDSLHGTGQLPKFEADLYKIDKHEEHDTSD 229

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQ 388
           R   L P        +F   +     LP++       +R+E         GL+R   F +
Sbjct: 230 RDLYLIPTAEVPVTNLFRDEIIDEDTLPLKFTAHTPCFRSEAGSYGRDTKGLIRQHQFEK 289

Query: 389 DDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDA 444
            +       +Q +     +     SI +       ++ L T              +W   
Sbjct: 290 VEMVQIVHPDQSYEALESLTQQAESILQKLELPYRVMSLCTGDIGFSAAKTYDLEVWLPG 349

Query: 445 ENIMKGV 451
           +   + +
Sbjct: 350 QQAYREI 356


>gi|88706721|ref|ZP_01104423.1| Alanyl-tRNA synthetase [Congregibacter litoralis KT71]
 gi|88699042|gb|EAQ96159.1| Alanyl-tRNA synthetase [Congregibacter litoralis KT71]
          Length = 867

 Score = 66.0 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/156 (20%), Positives = 62/156 (39%), Gaps = 7/156 (4%)

Query: 44  NGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-D 102
           +GKV + S  + + ++E       R    + HS  H++  A++    +     G +++  
Sbjct: 522 HGKVLEGSIALGD-TVECEIDNAIRQKTRLNHSATHLLHAALRYELGDHVAQKGSLVDGQ 580

Query: 103 GFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL 162
              +DF   +  + ++L  +E  +   I  +     Q +S ++ARE         K    
Sbjct: 581 RLRFDFSNPEAMTPEQLRAVEDSVNAQIRANVEVTTQIMSMDEAREAGAMALFGEKY--- 637

Query: 163 ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFF 198
                   +T+   G   +LC G HV  TG +  F 
Sbjct: 638 --GDEVRVLTMGENGFSVELCGGTHVERTGDIGMFR 671


>gi|296111415|ref|YP_003621797.1| seryl-tRNA synthetase [Leuconostoc kimchii IMSNU 11154]
 gi|295832947|gb|ADG40828.1| seryl-tRNA synthetase [Leuconostoc kimchii IMSNU 11154]
          Length = 436

 Score = 66.0 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 74/188 (39%), Gaps = 16/188 (8%)

Query: 272 GWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G ++ + + ++M  +  ++ Y E+ TP V++      +G +  ++ + + V+  + T   
Sbjct: 179 GARLERAVYNFMLDQHHQEGYTEMITPIVVNDSAMFGTGQYPKFQDDAYRVEGLEQT--- 235

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFT 387
                  P         +       ++LP++       +R E   +     GL+R+  F 
Sbjct: 236 -----YIPTAEVPLTNYYAGETLPGQDLPIKFTALSPSFRKEAGSAGKDTRGLIRLHQFN 290

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +   F   EQ ++E  K+ +   +I +  G    ++ LST              +W  
Sbjct: 291 KVEMVKFTKPEQSYDELEKMTDNAENILRQLGLPYHVIMLSTGDMGFSAAKTYDVEVWMP 350

Query: 444 AENIMKGV 451
            +N  + +
Sbjct: 351 QQNTYREI 358


>gi|302409932|ref|XP_003002800.1| threonyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
 gi|261358833|gb|EEY21261.1| threonyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
          Length = 104

 Score = 66.0 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 1/69 (1%)

Query: 257 HIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYR 315
             +    G   +   G +IF  L+ ++RR+     +EE+ TP +  + LW+ SGH  +Y 
Sbjct: 1   MTSVYSPGSPIFLPNGARIFNRLVDFLRRQYVSYGFEEVITPNIYKKSLWEVSGHLQNYA 60

Query: 316 ANMFAVKCA 324
            +M+ V   
Sbjct: 61  DDMYTVTSR 69


>gi|57505123|ref|ZP_00371068.1| alanyl-tRNA synthetase [Campylobacter coli RM2228]
 gi|305433060|ref|ZP_07402216.1| alanine--tRNA ligase [Campylobacter coli JV20]
 gi|57019098|gb|EAL55813.1| alanyl-tRNA synthetase [Campylobacter coli RM2228]
 gi|304443761|gb|EFM36418.1| alanine--tRNA ligase [Campylobacter coli JV20]
          Length = 842

 Score = 66.0 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 41/165 (24%), Positives = 72/165 (43%), Gaps = 15/165 (9%)

Query: 41  VAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII 100
           V  N ++  L+D +    I  I   D R      HS  H++  A++ I        G ++
Sbjct: 521 VKANEEIK-LNDKI----IAKID-TDKREQTARHHSATHLLHHALREILGSHISQAGSLV 574

Query: 101 E-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKV 159
           E +   +DF   +  S +EL  IEK++ E+I   S  + + +  E A++         K 
Sbjct: 575 ESNKLRFDFTHHKALSKEELESIEKRVNEMIISSSEAILENMPLEDAKKSGAIALFNEKY 634

Query: 160 EILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVA 204
           +         NV +   GE  +LC G HV++T Q+  F+ + +  
Sbjct: 635 Q--------GNVRVLTLGESKELCGGTHVKNTAQIGSFYIVKESG 671


>gi|225023841|ref|ZP_03713033.1| hypothetical protein EIKCOROL_00707 [Eikenella corrodens ATCC
           23834]
 gi|224943315|gb|EEG24524.1| hypothetical protein EIKCOROL_00707 [Eikenella corrodens ATCC
           23834]
          Length = 430

 Score = 66.0 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/222 (17%), Positives = 74/222 (33%), Gaps = 14/222 (6%)

Query: 242 EKRDHRKLAREMDL-FHIAEDGSGVIFWHRKG--WKIFQTLISYMRRKI--KDDYEEINT 296
           E +DH  L  ++ L F  A   SG  F   KG   ++ + L  +M      +  Y E  T
Sbjct: 137 EIKDHVDLGEKLGLDFETAAALSGARFSLMKGQVARLHRALAQFMLDTHTQQHGYTECYT 196

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P ++       +G    +  ++F V    D  K  +     P             +    
Sbjct: 197 PYIVSDSTLIGTGQLPKFGEDLFHVIRGGDESKTKQYLI--PTAEVTLTNTVRERILPAD 254

Query: 357 ELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
            LP++L      +R+E         GL+R   F + +       +  ++   ++      
Sbjct: 255 ALPLKLTAHSPCFRSEAGSHGKDTRGLIRQHQFDKVEMVQIAHPDHSYDALEEMVGHAER 314

Query: 414 IYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
           I +       ++ L T              +W  A+N  + +
Sbjct: 315 ILQLLELPYRVITLCTGDMGFGAAKTYDLEVWVPAQNTYREI 356


>gi|162447763|ref|YP_001620895.1| alanyl-tRNA synthetase [Acholeplasma laidlawii PG-8A]
 gi|205829962|sp|A9NGN9|SYA_ACHLI RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|161985870|gb|ABX81519.1| alanyl-tRNA synthetase [Acholeplasma laidlawii PG-8A]
          Length = 851

 Score = 66.0 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 74/192 (38%), Gaps = 14/192 (7%)

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIED-GFYYDFDKEQPFSSDELA 120
           I  +D R   +  H+  H++ +A++          G    D    +D +  +    +E+ 
Sbjct: 522 IVNQDKRHHTMKNHTATHLLNQALKDTLGSHVKQQGSYNGDLKLTFDINHYETIKDEEIL 581

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW- 179
            +EK +Q+ I      +   L  ++A++L  + +   K          + V +   G W 
Sbjct: 582 TVEKIVQQKIKEQIDVVTHVLPIDEAKKLGAAMQFGEKY--------GDIVRVVDVGSWS 633

Query: 180 FDLCRGPHVRSTGQVKKFF---KLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
            + C G HV++T  +K F         +G Y        +LS++     N    + Q++ 
Sbjct: 634 MEFCGGTHVKNTSDIKNFMITSVESIGSGTYRFEAITGQVLSQVKKIVQNLLDMIHQHIE 693

Query: 237 FLEESEKRDHRK 248
            ++     +H  
Sbjct: 694 KIKSL-DENHNL 704


>gi|319404395|emb|CBI77998.1| Alanyl-tRNA synthetase [Bartonella rochalimae ATCC BAA-1498]
          Length = 887

 Score = 66.0 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/164 (20%), Positives = 70/164 (42%), Gaps = 5/164 (3%)

Query: 45  GKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DG 103
           G+V      + +  +E+    + R      HS  H++ EA++ I        G ++    
Sbjct: 535 GEVKSGQAQISDC-VELSVDSERRRKIRANHSATHLLHEALRCILGPHIAQKGSLVSPSR 593

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKAR--ELFESKKEAYKVEI 161
             +DF   +P SS+EL ++E    +I+ ++S    + ++ + A          E Y  E+
Sbjct: 594 LRFDFSHPKPISSEELKRVEDLANDIVLQNSKVTTRLMALDDAILGGAMALFGEKYGDEV 653

Query: 162 -LESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVA 204
            + S+  +   T   +    +LC G HV+ TG +     + + +
Sbjct: 654 RVVSMGERCEPTELTRHWSIELCGGTHVQRTGDIGLIHIVGESS 697


>gi|295096401|emb|CBK85491.1| seryl-tRNA synthetase [Enterobacter cloacae subsp. cloacae NCTC
           9394]
          Length = 430

 Score = 66.0 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 43/244 (17%), Positives = 83/244 (34%), Gaps = 15/244 (6%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLA--REMDLFHIAEDGSGVIFWHRKG--WKIF 276
           G   N   E+ ++    E   E RDH  L        F  A   +G  F   KG    + 
Sbjct: 114 GKDENDNVEVKRWGTPREFDFEVRDHVTLGEMHAGLDFAAAVKLTGSRFVVMKGQIAHLH 173

Query: 277 QTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           + L  +M     +   Y E   P +++      +G    +  ++F  +  D+   D   +
Sbjct: 174 RALAQFMLDLHTEQHGYSETYVPYLVNHDTLYGTGQLPKFAGDLFHTRPLDEEA-DSSNY 232

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDA 391
           AL P        +    +    +LP++L      +R+E         GL+R+  F + + 
Sbjct: 233 ALIPTAEVPLTNLVRDEIIDEDDLPIKLTAHSPCFRSEAGSYGRDTRGLIRMHQFDKVEM 292

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENI 447
                 E+  +   ++      + +  G     + L T              +W  A+N 
Sbjct: 293 VQIVRPEESMDALEEMTGHAEKVLELLGLPYRRMALCTGDMGFGACKTFDLEVWVPAQNT 352

Query: 448 MKGV 451
            + +
Sbjct: 353 YREI 356


>gi|330469508|ref|YP_004407251.1| seryl-tRNA synthetase [Verrucosispora maris AB-18-032]
 gi|328812479|gb|AEB46651.1| seryl-tRNA synthetase [Verrucosispora maris AB-18-032]
          Length = 426

 Score = 66.0 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 42/233 (18%), Positives = 85/233 (36%), Gaps = 16/233 (6%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDL----FHIAEDGSGVIFWHRKGWKIFQTLISY-MRR 285
           +  +       + RDH +L+R + L      +   GSG   +   G ++   LI++ + R
Sbjct: 123 VKTFGAPPAIEKIRDHVELSRMLALVDHERGVKLGGSGFWMYTGLGARLEWALINWLIER 182

Query: 286 KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            I+  YE +  P +L       +G +  +  +++ +    D     R   L P      +
Sbjct: 183 NIEAGYEFLLPPHLLLDTAGFAAGQFPKFYDDVYHL----DKQSAPRGQFLLPTAETAIL 238

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFN 402
             +   +     LP+++  +   YR E +GS     G +R   F + +   F   EQ   
Sbjct: 239 GAYQDEILDTASLPLKVFAYTPCYRREAAGSHSDERGTVRGHQFNKVEIFQFTLPEQADA 298

Query: 403 ECLKIHNLIISIYKDFGFEKIMV----KLSTRPEKRVGSDALWDDAENIMKGV 451
              ++     S+ +  G            S+   ++     +W  +    K V
Sbjct: 299 ALEQMVAHAESLVEGLGLHYQRSLLAAGDSSASMRKTLDIEVWMPSTGKYKEV 351


>gi|220925350|ref|YP_002500652.1| alanyl-tRNA synthetase [Methylobacterium nodulans ORS 2060]
 gi|219949957|gb|ACL60349.1| alanyl-tRNA synthetase [Methylobacterium nodulans ORS 2060]
          Length = 886

 Score = 66.0 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/139 (21%), Positives = 61/139 (43%), Gaps = 4/139 (2%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSS 116
           +IE+    + R+     HS  H++ EA++ +  +     G ++      +DF   +P + 
Sbjct: 547 AIELQVDHERRAAIRAHHSATHLLHEALRQVLGDHVAQKGSLVSPERLRFDFSHPKPMND 606

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARE--LFESKKEAYKVEILESIPAKENVTLY 174
           DE+A +E     ++ ++ P + + ++ + A          E Y  E+      +E+    
Sbjct: 607 DEVAAVEDMANRVLLQNGPVVTKLMAVDDAIATGARALFGEKYGDEVRVVSMGEESSADG 666

Query: 175 RQGEW-FDLCRGPHVRSTG 192
           R   +  +LC G HV  TG
Sbjct: 667 RPKAFSVELCGGTHVARTG 685


>gi|283833814|ref|ZP_06353555.1| serine--tRNA ligase [Citrobacter youngae ATCC 29220]
 gi|291070481|gb|EFE08590.1| serine--tRNA ligase [Citrobacter youngae ATCC 29220]
          Length = 430

 Score = 66.0 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 62/188 (32%), Gaps = 10/188 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M     +   Y E   P +++      +G    +  ++F  +  D+   D
Sbjct: 170 ARMHRALSQFMLDLHTEQHGYSENYVPYLVNHDTLYGTGQLPKFAGDLFHTRPLDEEA-D 228

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
              +AL P        +    +     LP+++      +R+E         GL+R+  F 
Sbjct: 229 SSNYALIPTAEVPLTNLVRDEIIDEDALPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFD 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E       ++      + +  G     + L T              +W  
Sbjct: 289 KVEMVQIVRPEDSMEALEEMTGHAEKVLQLLGLPYRKIILCTGDMGFGACKTYDLEVWIP 348

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 349 AQNTYREI 356


>gi|296133407|ref|YP_003640654.1| alanyl-tRNA synthetase [Thermincola sp. JR]
 gi|296031985|gb|ADG82753.1| alanyl-tRNA synthetase [Thermincola potens JR]
          Length = 884

 Score = 66.0 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/162 (21%), Positives = 71/162 (43%), Gaps = 15/162 (9%)

Query: 43  INGKVCDLSDPVRE----GSIEIITPEDPRSLAVIR-HSCAHIMAEAVQSIWPEVQVAIG 97
            NG +  L    ++    G +     +  R   + R HS  H++ +A++ +  +     G
Sbjct: 532 FNGLMVHLGTVEKDIVSFGDVMDARVDARRRKQIARNHSVTHLLHKALKEVLGDHVNQAG 591

Query: 98  PIIEDG-FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEA 156
            ++E     +DF   +  + +EL ++E ++ E+I  +        S ++A+ L  +    
Sbjct: 592 SLVEPERLRFDFTHFRAVTPEELQKVEDRVNEMILANLDVHAFETSLDEAKALGATALFG 651

Query: 157 YKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
            K          E V + + G++  +LC G H+RSTG+   F
Sbjct: 652 EKY--------GEKVRVVKMGDYSMELCGGTHLRSTGEAGLF 685


>gi|258423229|ref|ZP_05686121.1| seryl-tRNA synthetase [Staphylococcus aureus A9635]
 gi|257846558|gb|EEV70580.1| seryl-tRNA synthetase [Staphylococcus aureus A9635]
          Length = 428

 Score = 66.0 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 52/357 (14%), Positives = 123/357 (34%), Gaps = 35/357 (9%)

Query: 106 YDFDKEQPFSSDELAQIEKKMQEIIA--RDSPFLKQYLSHEKARELFESKKEAYKVEILE 163
            +   + P   DE+ +++++ +++I+        +  +S E A +    +     +  + 
Sbjct: 18  IELRGDDPKVVDEILELDEQRRKLISATEGMKARRNKVSEEIALKKRNKENADDVIAEMR 77

Query: 164 SIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
           ++         +  E  D       + TG + +   L+         D +   + + +GT
Sbjct: 78  TLGDDIKEKDSQLNE-IDN------KMTGILCRIPNLISDDVPQGESDEDNVEVKK-WGT 129

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYM 283
                 E   +   +EE +  D  + A+      +             G ++ + L++YM
Sbjct: 130 PREFSFEPKAHWDIVEELKMADFDRAAKVSGARFVYLTNE--------GAQLERALMNYM 181

Query: 284 RRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
             K   +  Y E+  PQ+++      +G    +  ++F V        +       P   
Sbjct: 182 ITKHTTQHGYTEMMVPQLVNADTMYGTGQLPKFEEDLFKV--------EKEGLYTIPTAE 233

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKE 398
                 + + +     LP +     + +R+E   +     GL+R+  F + +   F   E
Sbjct: 234 VPLTNFYRNEIIQPGVLPEKFTGQSACFRSEAGSAGRDTRGLIRLHQFDKVEMVRFEQPE 293

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
             +N   ++     +I ++ G     V L T              +W  + N  K +
Sbjct: 294 DSWNALEEMTTNAEAILEELGLPYRRVILCTGDIGFSASKTYDLEVWLPSYNDYKEI 350


>gi|149190613|ref|ZP_01868882.1| alanyl-tRNA synthetase [Vibrio shilonii AK1]
 gi|148835611|gb|EDL52579.1| alanyl-tRNA synthetase [Vibrio shilonii AK1]
          Length = 861

 Score = 66.0 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 65/160 (40%), Gaps = 11/160 (6%)

Query: 40  AVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPI 99
           A+A +G++ +     +   ++ I     R+   + HS  H++  A++ +  E     G +
Sbjct: 530 AIAHHGELVE-GVLAKGDEVDAIVDAQRRAAISLNHSATHLLHAALRQVLGEHVTQKGSL 588

Query: 100 IE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYK 158
           ++ D   +DF   +  +  E+ ++E+ +   I  +       +  E A+          K
Sbjct: 589 VKPDNLRFDFSHLEAMTKAEIKEVERLVNAQIRTNHVIETNVMDIESAKAKGAMALFGEK 648

Query: 159 VEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
                     + V +   G++  +LC G H  +TG +  F
Sbjct: 649 Y--------DDEVRVLSMGDFSTELCGGIHASNTGDIGLF 680


>gi|119355895|ref|YP_910539.1| glycyl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266]
 gi|119353244|gb|ABL64115.1| glycyl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266]
          Length = 489

 Score = 66.0 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 49/342 (14%), Positives = 107/342 (31%), Gaps = 51/342 (14%)

Query: 308 SGHWDSYRANMFAVKCADDTIKDLRTFAL-KPMNCPGHVAVFNH-GLKSYRELPVRLAEF 365
           SG W   R      +C    + D  +    +P    G    F++    S  ++P  +A+ 
Sbjct: 170 SGEWTEVRQFNLMFQCGMGALADKASIVYLRPETAQGIFVNFHNVRESSRMKVPFGIAQI 229

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY-KDFGFEKIM 424
           G  +RNE     + + R+  F Q +   F                  + Y    G  +  
Sbjct: 230 GKAFRNEIVKG-NFIFRMVEFEQMEMQYFVKPGTQAEAFEAWREERFNWYTSALGINRDK 288

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           +      +    +D  +D                 +     G+   EG     + ++ LK
Sbjct: 289 LHWYKHDKLAHYADLAYDI----------------KFEFPFGIEEIEGIH--SRTDFDLK 330

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG 544
                               +   +     +E+  P ++  +  G    F+ ++ + +  
Sbjct: 331 -------------QHQEYSGKNMEYIDQLTNERYIPYVVETSA-GCDRLFLALLSDAYSE 376

Query: 545 N-----------LPLWLSPIQAIVTTITS--SAVEYAQEIANLLKSHHLSIETDFRNETI 591
           +               ++P++A V  +       E A  IA+ L+     I+ D    +I
Sbjct: 377 DVVDGEPRISLRFSPKVAPVKAAVLPLLKKGEMAEKAARIADDLRQL-YMIQQDDAG-SI 434

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
             + R       P  +    +     ++ IR   + + +++S
Sbjct: 435 GKRYRRQDEIGTPFCLTIDHETLENDTLTIRHRDTASQERIS 476


>gi|329902133|ref|ZP_08273037.1| Alanyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480]
 gi|327548856|gb|EGF33484.1| Alanyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480]
          Length = 869

 Score = 66.0 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/138 (20%), Positives = 54/138 (39%), Gaps = 9/138 (6%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKM 126
           R   +  HS  H+M +A++ +        G +++ D   +DF    P ++DE+ Q+E  +
Sbjct: 552 RGRTIRNHSATHLMHKALREVLGAHVAQKGSLVDTDKTRFDFSHNGPLTADEIRQVELIV 611

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGP 186
              I  +     + + ++ A +         K          + V +   G   +LC G 
Sbjct: 612 NREILANVATEARVMPYDDAVKYGAMALFGEKY--------GDEVRVLGIGSSKELCGGV 663

Query: 187 HVRSTGQVKKFFKLMKVA 204
           HV  TG +  F    +  
Sbjct: 664 HVDRTGDIGLFKITAESG 681


>gi|296103101|ref|YP_003613247.1| seryl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
 gi|295057560|gb|ADF62298.1| seryl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
          Length = 430

 Score = 66.0 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 43/244 (17%), Positives = 83/244 (34%), Gaps = 15/244 (6%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLA--REMDLFHIAEDGSGVIFWHRKG--WKIF 276
           G   N   E+ ++    E   E RDH  L        F  A   +G  F   KG    + 
Sbjct: 114 GKDENDNVEVKRWGTPREFDFEVRDHVTLGEMHAGLDFAAAVKLTGSRFVVMKGQIAHLH 173

Query: 277 QTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           + L  +M     +   Y E   P +++      +G    +  ++F  +  D+   D   +
Sbjct: 174 RALAQFMLDLHTEQHGYSETYVPYLVNHDTLYGTGQLPKFAGDLFHTRPLDEEA-DSSNY 232

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDA 391
           AL P        +    +    +LP++L      +R+E         GL+R+  F + + 
Sbjct: 233 ALIPTAEVPLTNLVRDEIIDEDDLPIKLTAHSPCFRSEAGSYGRDTRGLIRMHQFDKVEM 292

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENI 447
                 E+  +   ++      + +  G     + L T              +W  A+N 
Sbjct: 293 VQIVRPEESMDALEEMTGHAEKVLELLGLPYRRMALCTGDMGFGACKTFDLEVWVPAQNT 352

Query: 448 MKGV 451
            + +
Sbjct: 353 YREI 356


>gi|257465419|ref|ZP_05629790.1| seryl-tRNA synthetase [Actinobacillus minor 202]
 gi|257451079|gb|EEV25122.1| seryl-tRNA synthetase [Actinobacillus minor 202]
          Length = 435

 Score = 66.0 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 63/190 (33%), Gaps = 11/190 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK--CADDTI 328
            ++ + L  +M     +   Y E N P +++      +G    +  ++F  +     D  
Sbjct: 171 ARLHRALSQFMLDLHTEQHGYVETNVPFLVNHDTLFGTGQLPKFGEDLFHTQPLTGQDPN 230

Query: 329 KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRG 385
           +  R F+L P        +    +     LP+R       +R+E         GL+R+  
Sbjct: 231 ETQRPFSLIPTAEVPVTNLVRDEIIDEETLPLRYTAHTPCFRSEAGSYGRDTRGLIRMHQ 290

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALW 441
           F + +     T E+      ++      + +        V L T              +W
Sbjct: 291 FEKVEMVQIVTPEKSMEALEELTGHAEKVLQLLNLPYRKVLLCTGDMGFGSAKTYDLEVW 350

Query: 442 DDAENIMKGV 451
             A+N  + +
Sbjct: 351 LPAQNTYREI 360


>gi|147676348|ref|YP_001210563.1| seryl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
 gi|189083576|sp|A5D6D5|SYS_PELTS RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|146272445|dbj|BAF58194.1| seryl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
          Length = 422

 Score = 66.0 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/223 (16%), Positives = 81/223 (36%), Gaps = 21/223 (9%)

Query: 242 EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEIN 295
             R H ++  ++D+          G+   F+   G ++ + +I++M         Y EI 
Sbjct: 135 TPRPHWEIGEQLDIIDFERGGKVAGARFSFYKGYGARLERAVINFMLDLHTAEHGYVEIF 194

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
            P ++++     +G    +  +MF +        +   + L P        ++ + +   
Sbjct: 195 PPFIVNRDSMVGTGQLPKFAEDMFKL--------EGAEYYLIPTAEVPVTNLYRNEILDG 246

Query: 356 RELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
            +LP+    + + +R E   +     GL+R   F + +   FC  E  ++E  K+     
Sbjct: 247 EKLPILHCAYSACFRAEAGAAGRDTRGLIRQHQFNKVELVKFCRPEDSYDELEKLTADAE 306

Query: 413 SIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
            + +  G    +V L T              +W  +    K +
Sbjct: 307 KVLQKLGLPYRVVVLCTGDLGFSAAKTYDLEVWLPSYQEYKEI 349


>gi|85712736|ref|ZP_01043781.1| Histidyl-tRNA synthetase [Idiomarina baltica OS145]
 gi|85693468|gb|EAQ31421.1| Histidyl-tRNA synthetase [Idiomarina baltica OS145]
          Length = 415

 Score = 66.0 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 59/426 (13%), Positives = 128/426 (30%), Gaps = 72/426 (16%)

Query: 269 HRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
             +    +Q + + +R+      Y+EI  P +    L+++S    +           D  
Sbjct: 5   LPEQTAAWQQVEAIIRQVAASYGYQEIRMPVLESTALFKRSIGEVTDIVEKEMYTFDD-- 62

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
            ++  +  L+P      V   N     Y ++  RL   G ++R E         R R F 
Sbjct: 63  -RNGESVTLRPEGTASCVRAGNQHGLLYNQI-QRLWYMGPMFRYERPQK----GRYRQFH 116

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI---------------MVKLSTRPE 432
           Q     F  +    +   ++  L   ++K  G                     + + R  
Sbjct: 117 QFGIETFGLE--GADADAEVILLSARLWKALGMADQVELQLNSLGSNEARARYRDALRDY 174

Query: 433 KRVGSDALWDDAENIMKG----VLDTIKNSSQDRIN-------TGVLLGEGAFYGPK--- 478
                  L +D++  +      +LD+   ++Q  +              +  F   K   
Sbjct: 175 LEQYKSELDEDSQRRLDTNPLRILDSKDGNTQQLLEQAPKLSDYWDEESKQHFDELKARL 234

Query: 479 ----------------FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
                            +Y  +            Q       R++        +    V 
Sbjct: 235 DAAGIPYVFNERLVRGLDYYNRTVFEWVTTALGAQGTVCAGGRYDGLVEQLGGKATPAVG 294

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSP---IQAIVTTITSSAVEYAQEIANLLKSH- 578
                   +ER + ++ E  K      L+P   + A +  +  +A   AQ +A  L++  
Sbjct: 295 FAMG----MERLVLLLQEQEK------LAPRRAVDAYLMPLGEAAELNAQAVAEKLRNEL 344

Query: 579 -HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR-RFGSTTTQKVSLLD 636
             L I        +  +I++       + +I G+ E     + ++    +   Q +   +
Sbjct: 345 PDLRIVVHSGGGAMKKQIKKADKSGAEVALILGENELENNQLTVKPLRTTDDQQTLGWGE 404

Query: 637 AIPILT 642
            +  L 
Sbjct: 405 LVVALK 410


>gi|254418413|ref|ZP_05032137.1| alanyl-tRNA synthetase [Brevundimonas sp. BAL3]
 gi|196184590|gb|EDX79566.1| alanyl-tRNA synthetase [Brevundimonas sp. BAL3]
          Length = 882

 Score = 66.0 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/171 (22%), Positives = 72/171 (42%), Gaps = 18/171 (10%)

Query: 45  GKVCDLSDPVREGSIEI------ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP 98
           G +  LS  +  G++EI      +   D R      HS AH++  A++++        G 
Sbjct: 528 GDLHVLSAQITAGTLEIGARVAQLVDADKRMTTRANHSAAHLLHTALKNVLGPAVAQKGQ 587

Query: 99  IIEDG-FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE------LFE 151
           +++     +DF    P + DELA IE ++  +I ++ P   + ++ ++A E        E
Sbjct: 588 LVDSERARFDFSHGAPVTEDELAAIEAEVNAVIRQNVPAETRLMAPQEAIEAGAIALFGE 647

Query: 152 SKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMK 202
              +  +V  L      +N          +LC G HV  TG +  F  + +
Sbjct: 648 KYGDEVRVLTLGRSLVSDNAPY-----SVELCGGTHVARTGDIGLFKVVQE 693


>gi|319784062|ref|YP_004143538.1| alanyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317169950|gb|ADV13488.1| alanyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 888

 Score = 66.0 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/140 (21%), Positives = 58/140 (41%), Gaps = 4/140 (2%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFS 115
            ++E+      RS     HS  H++ EA++ +        G  +  +   +D    +P S
Sbjct: 546 AAVELKVDHARRSRLRANHSATHLIHEALREVLGSHVAQKGSLVAPERLRFDISHNKPIS 605

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKAREL--FESKKEAYKVEILESIPAKENVTL 173
           +++L ++E+   EI+ ++ P   + +S + A          E Y  E+            
Sbjct: 606 AEDLEEVERMANEIVVQNGPVTTRLMSVDDAIAEGAMALFGEKYGDEVRVVSMGTGLHGA 665

Query: 174 YRQGEW-FDLCRGPHVRSTG 192
                +  +LC G HVR+TG
Sbjct: 666 KANRPYSVELCGGTHVRATG 685


>gi|300854401|ref|YP_003779385.1| alanyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
 gi|300434516|gb|ADK14283.1| alanyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
          Length = 879

 Score = 66.0 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 40/163 (24%), Positives = 70/163 (42%), Gaps = 20/163 (12%)

Query: 37  KAVAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAI 96
           K ++ +IN           E +IE+   ED RS     H+  H++  A++ +  E     
Sbjct: 538 KVISGSIN----------LEDTIELSVDEDRRSNIRKNHTATHLLDSALKQVLGEQVHQS 587

Query: 97  GP-IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKE 155
           G  + E    +DF+  +  S ++L  IE  + E I +  P     +S E+A+E       
Sbjct: 588 GSYVDESRLRFDFNHFEAVSYEKLRNIENLVNESIMKVYPVKTTIMSLEEAKE------- 640

Query: 156 AYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
                 L     K+ V +   G +  +LC G HV ++G++  F
Sbjct: 641 -SGAIALFDNKYKDEVRVVSVGNFSKELCGGTHVSNSGEIGLF 682


>gi|282902640|ref|ZP_06310533.1| serine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|282918077|ref|ZP_06325827.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139]
 gi|282921299|ref|ZP_06329017.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427]
 gi|283767799|ref|ZP_06340714.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
 gi|282315714|gb|EFB46098.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427]
 gi|282318362|gb|EFB48722.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139]
 gi|282597099|gb|EFC02058.1| serine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|283461678|gb|EFC08762.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
          Length = 428

 Score = 66.0 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 52/357 (14%), Positives = 124/357 (34%), Gaps = 35/357 (9%)

Query: 106 YDFDKEQPFSSDELAQIEKKMQEIIA--RDSPFLKQYLSHEKARELFESKKEAYKVEILE 163
            +   + P   DE+ +++++ +++I+   +    +  +S E A +    +     +  + 
Sbjct: 18  IELRGDDPKVVDEILELDEQRRKLISATEEMKARRNKVSEEIALKKRNKENADDVIAEMR 77

Query: 164 SIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
           ++         +  E  D       + TG + +   L+         D +   + + +GT
Sbjct: 78  TLGDDIKEKDSQLNE-IDN------KMTGILCRIPNLISDDVPQGESDEDNVEVKK-WGT 129

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYM 283
                 E   +   +EE +  D  + A+      +             G ++ + L++YM
Sbjct: 130 PREFSFEPKAHWDIVEELKMADFDRAAKVSGARFVYLTNE--------GAQLERALMNYM 181

Query: 284 RRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
             K   +  Y E+  PQ+++      +G    +  ++F V        +       P   
Sbjct: 182 ITKHTTQHGYTEMMVPQLVNADTMYGTGQLPKFEEDLFKV--------EKEGLYTIPTAE 233

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKE 398
                 + + +     LP +     + +R+E   +     GL+R+  F + +   F   E
Sbjct: 234 VPLTNFYRNEIIQPGVLPEKFTGQSACFRSEAGSAGRDTRGLIRLHQFDKVEMVRFEQPE 293

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
             +N   ++     +I ++ G     V L T              +W  + N  K +
Sbjct: 294 DSWNALEEMTTNAEAILEELGLPYRCVILCTGDIGFSASKTYDLEVWLPSYNDYKEI 350


>gi|332530379|ref|ZP_08406324.1| seryl-tRNA synthetase [Hylemonella gracilis ATCC 19624]
 gi|332040190|gb|EGI76571.1| seryl-tRNA synthetase [Hylemonella gracilis ATCC 19624]
          Length = 437

 Score = 66.0 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/221 (16%), Positives = 81/221 (36%), Gaps = 13/221 (5%)

Query: 244 RDHRKLAREMDL-FHIAEDGSGVIFWHRKG--WKIFQTLISYM--RRKIKDDYEEINTPQ 298
           +DH  L   + L F      +G  F   KG   ++ + L  +M   +  +  Y E  TP 
Sbjct: 142 KDHVDLGEPLGLDFDTGAKLTGARFTVMKGQIARLHRALAQFMLDVQTQQHGYTECYTPY 201

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIK-DLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           +++    + +G    +  ++FA K      + +  +  L P +           + +  +
Sbjct: 202 IVNADTLRGTGQLPKFEEDLFAAKKGGQEGEAENVSLYLIPTSEVTLTNFVRDEIVAEAD 261

Query: 358 LPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           LP++L      +R+E         G++R   F + +       ++ +    ++     +I
Sbjct: 262 LPIKLTAHTPCFRSEAGSYGRDTRGMIRQHQFDKVEMVQIVHPDKSYEALEEMTRHAEAI 321

Query: 415 YKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
            +  G    ++ L T              +W  A+N  + +
Sbjct: 322 LQKLGLPYRVMSLCTGDMGFGAAKTYDLEVWLPAQNTYREI 362


>gi|292491239|ref|YP_003526678.1| alanyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
 gi|291579834|gb|ADE14291.1| alanyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
          Length = 873

 Score = 66.0 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/147 (22%), Positives = 59/147 (40%), Gaps = 13/147 (8%)

Query: 61  IITPEDPRSLAV---IRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSS 116
           +I  E  R+      + HS  H++  +++ +  E     G  +  D   +DF   +    
Sbjct: 540 LIQAEVERAHRAPTRLNHSATHLLHASLRQVLGEHVAQKGSLVTADRLRFDFSHFEALEP 599

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
           ++L QIE+ +   I  D P   Q +  ++A +         K          E V + R 
Sbjct: 600 EQLRQIERLVNAQIRADLPVETQIMPLQEALDAGVVALFGEKY--------GEQVRVLRM 651

Query: 177 GEW-FDLCRGPHVRSTGQVKKFFKLMK 202
           G +  +LC G HV  TG +  F  + +
Sbjct: 652 GNFSVELCGGTHVDRTGNIGLFKIINE 678


>gi|204930096|ref|ZP_03221117.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Javiana str. GA_MM04042433]
 gi|204321090|gb|EDZ06291.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Javiana str. GA_MM04042433]
 gi|322616395|gb|EFY13304.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 315996572]
 gi|322619645|gb|EFY16520.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-1]
 gi|322622659|gb|EFY19504.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-3]
 gi|322628572|gb|EFY25359.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-4]
 gi|322634947|gb|EFY31676.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 515920-1]
 gi|322637035|gb|EFY33738.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 515920-2]
 gi|322641604|gb|EFY38241.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 531954]
 gi|322644441|gb|EFY40981.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. NC_MB110209-0054]
 gi|322649589|gb|EFY46020.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. OH_2009072675]
 gi|322654109|gb|EFY50432.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. CASC_09SCPH15965]
 gi|322659224|gb|EFY55473.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 19N]
 gi|322663498|gb|EFY59700.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 81038-01]
 gi|322670234|gb|EFY66374.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MD_MDA09249507]
 gi|322671470|gb|EFY67592.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 414877]
 gi|322676826|gb|EFY72893.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 366867]
 gi|322682751|gb|EFY78770.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 413180]
 gi|322686430|gb|EFY82412.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 446600]
 gi|323191716|gb|EFZ76970.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 609458-1]
 gi|323199759|gb|EFZ84848.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 556150-1]
 gi|323202196|gb|EFZ87250.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 609460]
 gi|323209023|gb|EFZ93960.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 507440-20]
 gi|323210415|gb|EFZ95304.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 556152]
 gi|323215844|gb|EGA00584.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB101509-0077]
 gi|323222449|gb|EGA06823.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB102109-0047]
 gi|323226864|gb|EGA11047.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB110209-0055]
 gi|323229818|gb|EGA13941.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB111609-0052]
 gi|323233043|gb|EGA17139.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 2009083312]
 gi|323240778|gb|EGA24820.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 2009085258]
 gi|323243095|gb|EGA27115.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 315731156]
 gi|323247417|gb|EGA31373.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2009159199]
 gi|323250911|gb|EGA34788.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008282]
 gi|323256446|gb|EGA40180.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008283]
 gi|323263112|gb|EGA46654.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008284]
 gi|323267978|gb|EGA51457.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008285]
 gi|323270716|gb|EGA54156.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008287]
          Length = 430

 Score = 66.0 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 63/188 (33%), Gaps = 10/188 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M     +   Y E   P +++      +G    +  ++F  +  ++   D
Sbjct: 170 ARMHRALSQFMLDLHTEQHGYSENYVPYLVNHDTLYGTGQLPKFAGDLFHTRPLEEEA-D 228

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
              +AL P        +    +    +LP+++      +R+E         GL+R+  F 
Sbjct: 229 SSNYALIPTAEVPLTNLVRDEIIDEDQLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFD 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E       ++      + +  G     + L T              +W  
Sbjct: 289 KVEMVQIVRPEDSMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMGFGACKTYDLEVWVP 348

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 349 AQNTYREI 356


>gi|84390150|ref|ZP_00991412.1| alanyl-tRNA synthetase [Vibrio splendidus 12B01]
 gi|84376804|gb|EAP93679.1| alanyl-tRNA synthetase [Vibrio splendidus 12B01]
          Length = 860

 Score = 66.0 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 59/143 (41%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFS 115
             +E I   + R+   + HS  H++  A++ +  E     G +++ D   +DF   +  +
Sbjct: 545 DKVEAIVDAERRAAISLNHSATHLLHSALREVLGEHVAQKGSLVKPDNLRFDFSNLEAVT 604

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
             ++ ++E+ +   + ++       +  E A+E         K          + V +  
Sbjct: 605 PAQIKEVERLVNAQVRKNHVIETNIMDIESAKEKGAMALFGEKY--------DDEVRVLS 656

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            GE+  +LC G H  +TG +  F
Sbjct: 657 MGEFSTELCGGIHASNTGDIGLF 679


>gi|220934463|ref|YP_002513362.1| alanyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7]
 gi|219995773|gb|ACL72375.1| alanyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7]
          Length = 865

 Score = 66.0 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/128 (26%), Positives = 58/128 (45%), Gaps = 10/128 (7%)

Query: 72  VIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDELAQIEKKMQEII 130
           V+ HS  H+M  A++ I  +     G  +  D   +DF   QP S++EL +IE+++ E I
Sbjct: 550 VLNHSATHLMHAALREILGDHVQQKGSLVAPDRLRFDFSHFQPVSAEELERIERRVNEAI 609

Query: 131 ARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVR 189
             ++    + +  ++A E         K          + V +   G +  +LC G HVR
Sbjct: 610 RANAEAEARIMPIDQALESGAMALFGEKY--------GDEVRVLSMGGFSTELCGGTHVR 661

Query: 190 STGQVKKF 197
            TG +  F
Sbjct: 662 RTGDIGVF 669


>gi|254436958|ref|ZP_05050452.1| alanyl-tRNA synthetase [Octadecabacter antarcticus 307]
 gi|198252404|gb|EDY76718.1| alanyl-tRNA synthetase [Octadecabacter antarcticus 307]
          Length = 884

 Score = 66.0 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/148 (22%), Positives = 61/148 (41%), Gaps = 5/148 (3%)

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDE 118
           E++     RS     HS  H++ EA++    +  V  G     D   +DF      ++ E
Sbjct: 547 ELVVDHAQRSAIRANHSATHLLNEALRVALGDHVVQRGSLNAADRLRFDFTHTSCMTAVE 606

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYK----VEILESIPAKENVTLY 174
           LAQ+E  +   + +++    + ++ + AR L    +   K    V ++    A     + 
Sbjct: 607 LAQVEHDVNHYVQQNTTVSTRIMTPDDARALGAQAQFGEKYGDEVRVVSMGRANTGKGVD 666

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMK 202
           RQ    +LC G HV  TG +  F    +
Sbjct: 667 RQTYSLELCGGTHVARTGDIGMFALTSE 694


>gi|154684531|ref|YP_001419692.1| seryl-tRNA synthetase [Bacillus amyloliquefaciens FZB42]
 gi|166200599|sp|A7Z0D5|SYS_BACA2 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|52313148|emb|CAH55604.1| Seryl-tRNA synthetase [Bacillus amyloliquefaciens FZB42]
 gi|154350382|gb|ABS72461.1| SerS [Bacillus amyloliquefaciens FZB42]
          Length = 425

 Score = 66.0 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 83/225 (36%), Gaps = 21/225 (9%)

Query: 240 ESEKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRRKIKDDYE--E 293
             E + H  +A  +++          GS  +F+   G ++ + L ++M     D+Y+  E
Sbjct: 134 SYEPKPHWDIADHLNILDFERASKVTGSRFVFYKGLGARLERALYNFMLDLHVDEYDYTE 193

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           +  P ++++     +G    +  + F ++           + L P        +    + 
Sbjct: 194 VIPPYMVNRTSMTGTGQLPKFEEDAFKIR--------EEDYFLIPTAEVPITNMHRDEIL 245

Query: 354 SYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
           S   LP+  A F + +R+E   +     GL+R   F + +   F   E  + E  K+ N 
Sbjct: 246 SGENLPINYAAFSACFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYEELEKLTNQ 305

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENIMKGV 451
              + +       ++ + T              +W  +++  + +
Sbjct: 306 AERVLQLLELPYRVMSMCTGDLGFTAAKKYDIEVWIPSQDTYREI 350


>gi|261493580|ref|ZP_05990100.1| serine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
 gi|261310762|gb|EEY11945.1| serine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
          Length = 435

 Score = 66.0 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 61/190 (32%), Gaps = 11/190 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK--CADDTI 328
            ++ + L  +M     +   Y E N P +++      +G    +  ++F  +     D  
Sbjct: 171 ARLHRALSQFMLDLHTEQHGYVETNVPFLVNHDTLYGTGQLPKFGEDLFHTQPLTGQDPN 230

Query: 329 KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRG 385
           +  R F L P        +    +     LP+R       +R E         GL+R+  
Sbjct: 231 EVQRPFGLIPTAEVPVTNLVRDEIIDEDSLPLRYTAHTPCFRAEAGSYGRDTRGLIRMHQ 290

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALW 441
           F + +       E+      ++      + +  G     V L T              +W
Sbjct: 291 FEKVEMVQIVAPEKSMEALEELTGHAEKVLQLLGLPYRKVLLCTGDMGFGAAKTYDLEVW 350

Query: 442 DDAENIMKGV 451
             A+N  + +
Sbjct: 351 LPAQNTYREI 360


>gi|224582773|ref|YP_002636571.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi C strain RKS4594]
 gi|254783044|sp|C0PXT0|SYS_SALPC RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|224467300|gb|ACN45130.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi C strain RKS4594]
          Length = 430

 Score = 66.0 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 63/188 (33%), Gaps = 10/188 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M     +   Y E   P +++      +G    +  ++F  +  ++   D
Sbjct: 170 ARMHRALSQFMLDLHTEQHGYSENYVPYLVNHDTLYGTGQLPKFAGDLFHTRPLEEEA-D 228

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
              +AL P        +    +    +LP+++      +R+E         GL+R+  F 
Sbjct: 229 SSNYALIPTAEVPLTNLVRDEIIDEDQLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFD 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E       ++      + +  G     + L T              +W  
Sbjct: 289 KVEMVQIVRPEDSMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMGFGACKTYDLEVWVP 348

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 349 AQNTYREI 356


>gi|254361093|ref|ZP_04977238.1| serine--tRNA ligase [Mannheimia haemolytica PHL213]
 gi|261495418|ref|ZP_05991866.1| serine--tRNA ligase [Mannheimia haemolytica serotype A2 str. OVINE]
 gi|153092579|gb|EDN73634.1| serine--tRNA ligase [Mannheimia haemolytica PHL213]
 gi|261308923|gb|EEY10178.1| serine--tRNA ligase [Mannheimia haemolytica serotype A2 str. OVINE]
          Length = 435

 Score = 66.0 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 61/190 (32%), Gaps = 11/190 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK--CADDTI 328
            ++ + L  +M     +   Y E N P +++      +G    +  ++F  +     D  
Sbjct: 171 ARLHRALSQFMLDLHTEQHGYVETNVPFLVNHDTLYGTGQLPKFGEDLFHTQPLTGQDPN 230

Query: 329 KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRG 385
           +  R F L P        +    +     LP+R       +R E         GL+R+  
Sbjct: 231 EVQRPFGLIPTAEVPVTNLVRDEIIDEDSLPLRYTAHTPCFRAEAGSYGRDTRGLIRMHQ 290

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALW 441
           F + +       E+      ++      + +  G     V L T              +W
Sbjct: 291 FEKVEMVQIVAPEKSMEALEELTGHAEKVLQLLGLPYRKVLLCTGDMGFGAAKTYDLEVW 350

Query: 442 DDAENIMKGV 451
             A+N  + +
Sbjct: 351 LPAQNTYREI 360


>gi|16759834|ref|NP_455451.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. CT18]
 gi|16764324|ref|NP_459939.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|29142393|ref|NP_805735.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. Ty2]
 gi|56413985|ref|YP_151060.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. ATCC 9150]
 gi|62179487|ref|YP_215904.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|161614806|ref|YP_001588771.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi B str. SPB7]
 gi|167550365|ref|ZP_02344122.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA29]
 gi|167994705|ref|ZP_02575796.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|168230857|ref|ZP_02655915.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Kentucky str. CDC 191]
 gi|168263551|ref|ZP_02685524.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Hadar str. RI_05P066]
 gi|168466548|ref|ZP_02700410.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. SL317]
 gi|168822936|ref|ZP_02834936.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Weltevreden str. HI_N05-537]
 gi|194445741|ref|YP_002040162.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. SL254]
 gi|194471358|ref|ZP_03077342.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Kentucky str. CVM29188]
 gi|197249370|ref|YP_002145881.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Agona str. SL483]
 gi|197262813|ref|ZP_03162887.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA23]
 gi|197362908|ref|YP_002142545.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. AKU_12601]
 gi|198244710|ref|YP_002214887.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Dublin str. CT_02021853]
 gi|200390080|ref|ZP_03216691.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Virchow str. SL491]
 gi|205352171|ref|YP_002225972.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 287/91]
 gi|207856355|ref|YP_002243006.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. P125109]
 gi|213428591|ref|ZP_03361341.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E02-1180]
 gi|213580909|ref|ZP_03362735.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E98-0664]
 gi|213609744|ref|ZP_03369570.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E98-2068]
 gi|213851472|ref|ZP_03381370.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. M223]
 gi|238913262|ref|ZP_04657099.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Tennessee str. CDC07-0191]
 gi|289830102|ref|ZP_06547533.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E98-3139]
 gi|54039690|sp|P67564|SYS_SALTI RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|54042041|sp|P67563|SYS_SALTY RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|67461661|sp|Q5PGI6|SYS_SALPA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|81309725|sp|Q57R38|SYS_SALCH RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|189083584|sp|A9N7X6|SYS_SALPB RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|238689928|sp|B5BBR2|SYS_SALPK RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|238690019|sp|B5F146|SYS_SALA4 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|238690350|sp|B5FQ36|SYS_SALDC RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|238690425|sp|B5QYP4|SYS_SALEP RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|238690487|sp|B5R8I1|SYS_SALG2 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|238693584|sp|B4T128|SYS_SALNS RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|25293157|pir||AI0611 seryl-tRNA synthetase [imported] - Salmonella enterica subsp.
           enterica serovar Typhi (strain CT18)
 gi|16419475|gb|AAL19898.1| serine tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|16502127|emb|CAD05363.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi]
 gi|29138023|gb|AAO69584.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. Ty2]
 gi|56128242|gb|AAV77748.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. ATCC 9150]
 gi|62127120|gb|AAX64823.1| serine tRNA synthetase ; also charges selenocystein tRNA with
           serine [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|161364170|gb|ABX67938.1| hypothetical protein SPAB_02558 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194404404|gb|ACF64626.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. SL254]
 gi|194457722|gb|EDX46561.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Kentucky str. CVM29188]
 gi|195631016|gb|EDX49602.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. SL317]
 gi|197094385|emb|CAR59900.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. AKU_12601]
 gi|197213073|gb|ACH50470.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Agona str. SL483]
 gi|197241068|gb|EDY23688.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA23]
 gi|197939226|gb|ACH76559.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Dublin str. CT_02021853]
 gi|199602525|gb|EDZ01071.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Virchow str. SL491]
 gi|205271952|emb|CAR36796.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 287/91]
 gi|205324587|gb|EDZ12426.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA29]
 gi|205327478|gb|EDZ14242.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|205334663|gb|EDZ21427.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Kentucky str. CDC 191]
 gi|205340753|gb|EDZ27517.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Weltevreden str. HI_N05-537]
 gi|205347703|gb|EDZ34334.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Hadar str. RI_05P066]
 gi|206708158|emb|CAR32451.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. P125109]
 gi|261246180|emb|CBG23984.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. D23580]
 gi|267992697|gb|ACY87582.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. 14028S]
 gi|301157507|emb|CBW16997.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. SL1344]
 gi|312911951|dbj|BAJ35925.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. T000240]
 gi|320085200|emb|CBY94986.1| Seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Weltevreden str. 2007-60-3289-1]
 gi|321223287|gb|EFX48356.1| Seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. TN061786]
 gi|322713956|gb|EFZ05527.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. A50]
 gi|323129229|gb|ADX16659.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. 4/74]
 gi|326622640|gb|EGE28985.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Dublin str. 3246]
 gi|326627215|gb|EGE33558.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 9]
 gi|332987855|gb|AEF06838.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. UK-1]
          Length = 430

 Score = 66.0 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 63/188 (33%), Gaps = 10/188 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M     +   Y E   P +++      +G    +  ++F  +  ++   D
Sbjct: 170 ARMHRALSQFMLDLHTEQHGYSENYVPYLVNHDTLYGTGQLPKFAGDLFHTRPLEEEA-D 228

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
              +AL P        +    +    +LP+++      +R+E         GL+R+  F 
Sbjct: 229 SSNYALIPTAEVPLTNLVRDEIIDEDQLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFD 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E       ++      + +  G     + L T              +W  
Sbjct: 289 KVEMVQIVRPEDSMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMGFGACKTYDLEVWVP 348

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 349 AQNTYREI 356


>gi|171316010|ref|ZP_02905237.1| Anticodon-binding domain protein [Burkholderia ambifaria MEX-5]
 gi|171098814|gb|EDT43606.1| Anticodon-binding domain protein [Burkholderia ambifaria MEX-5]
          Length = 141

 Score = 66.0 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 47/121 (38%), Gaps = 17/121 (14%)

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSH-HLSIETDFRNETI 591
             I  ++E  +G   +   P+QA             +E+  + ++     +  DFR E +
Sbjct: 4   HVIVALVEAKQGCEAV---PVQAQ------------RELVEMARNQSGCRVLRDFRAERL 48

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPDCQ 651
             KI +      PI+ I G KE     + +R         +++ DA+  L + +  P   
Sbjct: 49  PRKIFDAGEVAAPIVAIAGCKEVLAGEVSLRSRDG-EQHVLTINDALADLKQHARVPSAT 107

Query: 652 K 652
           +
Sbjct: 108 R 108


>gi|57651117|ref|YP_184920.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
 gi|87160901|ref|YP_492731.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|88193832|ref|YP_498617.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|151220220|ref|YP_001331043.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|161508275|ref|YP_001573934.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|253730408|ref|ZP_04864573.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253733830|ref|ZP_04867995.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus TCH130]
 gi|258451358|ref|ZP_05699389.1| seryl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|262049439|ref|ZP_06022311.1| seryl-tRNA synthetase [Staphylococcus aureus D30]
 gi|262051875|ref|ZP_06024090.1| seryl-tRNA synthetase [Staphylococcus aureus 930918-3]
 gi|282920728|ref|ZP_06328447.1| seryl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|284023046|ref|ZP_06377444.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus 132]
 gi|294849837|ref|ZP_06790577.1| seryl-tRNA synthetase [Staphylococcus aureus A9754]
 gi|2501053|sp|P95689|SYS_STAA8 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|67461619|sp|Q5HJY7|SYS_STAAC RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|123487796|sp|Q2FKP7|SYS_STAA3 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|172048753|sp|A6QD48|SYS_STAAE RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|189083592|sp|A8YYT2|SYS_STAAT RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|1835218|emb|CAA71057.1| seryl-trna synthetase [Staphylococcus aureus]
 gi|57285303|gb|AAW37397.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
 gi|87126875|gb|ABD21389.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87201390|gb|ABD29200.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|150373020|dbj|BAF66280.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|160367084|gb|ABX28055.1| serine--tRNA ligase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|253725888|gb|EES94617.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253728133|gb|EES96862.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus TCH130]
 gi|257860888|gb|EEV83705.1| seryl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|259160202|gb|EEW45231.1| seryl-tRNA synthetase [Staphylococcus aureus 930918-3]
 gi|259162436|gb|EEW47006.1| seryl-tRNA synthetase [Staphylococcus aureus D30]
 gi|282594136|gb|EFB99124.1| seryl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|283469238|emb|CAQ48449.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus ST398]
 gi|294823385|gb|EFG39814.1| seryl-tRNA synthetase [Staphylococcus aureus A9754]
 gi|315197927|gb|EFU28260.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS01]
 gi|320141426|gb|EFW33269.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA131]
 gi|320144409|gb|EFW36174.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA177]
 gi|329731890|gb|EGG68250.1| serine--tRNA ligase [Staphylococcus aureus subsp. aureus 21189]
          Length = 428

 Score = 66.0 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 52/357 (14%), Positives = 124/357 (34%), Gaps = 35/357 (9%)

Query: 106 YDFDKEQPFSSDELAQIEKKMQEIIA--RDSPFLKQYLSHEKARELFESKKEAYKVEILE 163
            +   + P   DE+ +++++ +++I+   +    +  +S E A +    +     +  + 
Sbjct: 18  IELRGDDPKVVDEILELDEQRRKLISATEEMKARRNKVSEEIALKKRNKENADDVIAEMR 77

Query: 164 SIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
           ++         +  E  D       + TG + +   L+         D +   + + +GT
Sbjct: 78  TLGDDIKEKDSQLNE-IDN------KMTGILCRIPNLISDDVPQGESDEDNVEVKK-WGT 129

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYM 283
                 E   +   +EE +  D  + A+      +             G ++ + L++YM
Sbjct: 130 PREFSFEPKAHWDIVEELKMADFDRAAKVSGARFVYLTNE--------GAQLERALMNYM 181

Query: 284 RRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
             K   +  Y E+  PQ+++      +G    +  ++F V        +       P   
Sbjct: 182 ITKHTTQHGYTEMMVPQLVNADTMYGTGQLPKFEEDLFKV--------EKEGLYTIPTAE 233

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKE 398
                 + + +     LP +     + +R+E   +     GL+R+  F + +   F   E
Sbjct: 234 VPLTNFYRNEIIQPGVLPEKFTGQSACFRSEAGSAGRDTRGLIRLHQFDKVEMVRFEQPE 293

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
             +N   ++     +I ++ G     V L T              +W  + N  K +
Sbjct: 294 DSWNALEEMTTNAEAILEELGLPYRRVILCTGDIGFSASKTYDLEVWLPSYNDYKEI 350


>gi|18976636|ref|NP_577993.1| histidyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
 gi|32130125|sp|Q8U431|SYH_PYRFU RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|18892205|gb|AAL80388.1| histidyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
          Length = 432

 Score = 66.0 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 69/440 (15%), Positives = 130/440 (29%), Gaps = 86/440 (19%)

Query: 268 WHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADD 326
           +  +     + +   +R + +   ++E+ TP +    L++               +    
Sbjct: 11  FLPEEMVKRRWVFERIRERFETYGFKEVLTPTMEYTKLFELRS------GEEVVKQLYAF 64

Query: 327 TIKDLRTFALKP-MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE--PSGSLHGL--- 380
             K  R  +L+P M         N    + +  P++     +++R E   SG        
Sbjct: 65  KDKGGRDVSLRPDMTSSVARLYVNMFQTAPK--PIKWYYIANMFRYEEPQSGRYREFWQA 122

Query: 381 --------------------------MRVRGFTQDDAHVFCTKEQMFNECLK----IHNL 410
                                       +R FT +        E      +K    +  +
Sbjct: 123 GVELIGSDKVEADAEVIALFVESYLATGLREFTVNIGDRILLDEFAKMLGVKDDIGLMRI 182

Query: 411 IISI-----------YKDFGFEKIMVKLSTRPEKRVGS-DALWDDAEN------------ 446
           I               K+FG +K  ++         G  D +   AE             
Sbjct: 183 IDKKDKLPQEDFINALKEFGLDKNGIEKVLELINIKGKPDEVLPLAEELFTSEVAKNEIN 242

Query: 447 ---IMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLP 503
               +  +L+  +     RI+ G+  G   +    FE I  + +G     G  + D NL 
Sbjct: 243 RLYALIDLLEAYEVKDWIRIDLGIARGFDYYTSIVFEAIAPNDLGIGSIGGGGRYD-NLI 301

Query: 504 SRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSS 563
             F             P        G IER I I+    KG +P         V  I   
Sbjct: 302 EVFG----------GKPTPATGFAIG-IERLIPIL--EAKGLIPEVQIAPDVYVVPIGER 348

Query: 564 AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRR 623
             + A  IA  L+   +  E +     +   +   +   +   II G+K+     + +R 
Sbjct: 349 MKKVAIRIATSLRKSGIKTEIELMGRKLKKAMDYANKVGVKKTIIVGEKDLERGVVTVRD 408

Query: 624 FGSTTTQKVSLLDAIPILTK 643
             S    +V + D +  +  
Sbjct: 409 MESGEQNEVKIDDIVEFMKN 428


>gi|160880749|ref|YP_001559717.1| alanyl-tRNA synthetase [Clostridium phytofermentans ISDg]
 gi|205829959|sp|A9KMW7|SYA1_CLOPH RecName: Full=Alanyl-tRNA synthetase 1; AltName: Full=Alanine--tRNA
           ligase 1; Short=AlaRS 1
 gi|160429415|gb|ABX42978.1| alanyl-tRNA synthetase [Clostridium phytofermentans ISDg]
          Length = 879

 Score = 66.0 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/139 (21%), Positives = 64/139 (46%), Gaps = 11/139 (7%)

Query: 62  ITPEDPRSLAV-IRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDEL 119
           +T +  +  A+   HS  H++ +A++++        G  +  +   +DF      + +E+
Sbjct: 552 LTIDTQKRQAIGKNHSATHLLQKALRNVLGSHVEQAGSFVTSERLRFDFTHFSALTKEEI 611

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A++E  + E IA++ P +   +S E A++         K          ++V +   G++
Sbjct: 612 AKVEAMVNEEIAKNVPVVTDVMSVEDAKKSGAMALFGEKY--------GDSVRVVTMGDF 663

Query: 180 -FDLCRGPHVRSTGQVKKF 197
             +LC G HV +TG +  F
Sbjct: 664 SKELCGGTHVANTGSITVF 682


>gi|69247503|ref|ZP_00604373.1| Seryl-tRNA synthetase, class IIa [Enterococcus faecium DO]
 gi|257878632|ref|ZP_05658285.1| seryl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257881297|ref|ZP_05660950.1| seryl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|257890514|ref|ZP_05670167.1| seryl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|257893090|ref|ZP_05672743.1| seryl-tRNA synthetase [Enterococcus faecium 1,231,408]
 gi|258615286|ref|ZP_05713056.1| seryl-tRNA synthetase [Enterococcus faecium DO]
 gi|260558212|ref|ZP_05830408.1| seryl-tRNA synthetase [Enterococcus faecium C68]
 gi|293563863|ref|ZP_06678294.1| seryl-tRNA synthetase [Enterococcus faecium E1162]
 gi|293569174|ref|ZP_06680480.1| seryl-tRNA synthetase [Enterococcus faecium E1071]
 gi|294623744|ref|ZP_06702572.1| seryl-tRNA synthetase [Enterococcus faecium U0317]
 gi|314940146|ref|ZP_07847326.1| seryl-tRNA synthetase [Enterococcus faecium TX0133a04]
 gi|314943022|ref|ZP_07849826.1| seryl-tRNA synthetase [Enterococcus faecium TX0133C]
 gi|314948140|ref|ZP_07851536.1| seryl-tRNA synthetase [Enterococcus faecium TX0082]
 gi|314953446|ref|ZP_07856364.1| seryl-tRNA synthetase [Enterococcus faecium TX0133A]
 gi|314993814|ref|ZP_07859151.1| seryl-tRNA synthetase [Enterococcus faecium TX0133B]
 gi|314998160|ref|ZP_07863042.1| seryl-tRNA synthetase [Enterococcus faecium TX0133a01]
 gi|68194828|gb|EAN09303.1| Seryl-tRNA synthetase, class IIa [Enterococcus faecium DO]
 gi|257812860|gb|EEV41618.1| seryl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257816955|gb|EEV44283.1| seryl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|257826874|gb|EEV53500.1| seryl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|257829469|gb|EEV56076.1| seryl-tRNA synthetase [Enterococcus faecium 1,231,408]
 gi|260075386|gb|EEW63692.1| seryl-tRNA synthetase [Enterococcus faecium C68]
 gi|291588143|gb|EFF19985.1| seryl-tRNA synthetase [Enterococcus faecium E1071]
 gi|291596698|gb|EFF27921.1| seryl-tRNA synthetase [Enterococcus faecium U0317]
 gi|291604174|gb|EFF33677.1| seryl-tRNA synthetase [Enterococcus faecium E1162]
 gi|313587872|gb|EFR66717.1| seryl-tRNA synthetase [Enterococcus faecium TX0133a01]
 gi|313591737|gb|EFR70582.1| seryl-tRNA synthetase [Enterococcus faecium TX0133B]
 gi|313594549|gb|EFR73394.1| seryl-tRNA synthetase [Enterococcus faecium TX0133A]
 gi|313598222|gb|EFR77067.1| seryl-tRNA synthetase [Enterococcus faecium TX0133C]
 gi|313640651|gb|EFS05231.1| seryl-tRNA synthetase [Enterococcus faecium TX0133a04]
 gi|313645394|gb|EFS09974.1| seryl-tRNA synthetase [Enterococcus faecium TX0082]
          Length = 423

 Score = 66.0 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 40/244 (16%), Positives = 93/244 (38%), Gaps = 22/244 (9%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIF 276
           GT      E+ ++      + E + H ++A  +D+          GS  +++   G ++ 
Sbjct: 115 GTDEEDNVEIRRWSEPRTFAFEPKPHWEIAENLDILDFERGAKVAGSRFVYYKGLGARLE 174

Query: 277 QTLISYMRRK--IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           + + ++M  +   +  Y E+ TP +++      +G +  ++ ++F ++  D T+      
Sbjct: 175 RAVYNFMLDQHIYEHGYTEMITPYIVNSKAMFGTGQFPKFKEDVFQLENTDLTLI----- 229

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDA 391
              P         +N  +    +LP+        +R+E   +     GL+R+  F + + 
Sbjct: 230 ---PTAEVPLTNYYNDEILDGADLPIYFTALSPAFRSEAGSAGRDTRGLIRLHQFNKVEM 286

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENI 447
             F   E  + E  K+      I K       ++ LST              +W  A++ 
Sbjct: 287 VKFSDVEHSYEELEKMTADAEDILKKLHLPYRVMALSTGDMGFSAAKTYDLEVWIPAQDT 346

Query: 448 MKGV 451
            + +
Sbjct: 347 YREI 350


>gi|332365004|gb|EGJ42769.1| histidine--tRNA ligase [Streptococcus sanguinis SK355]
          Length = 426

 Score = 66.0 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 64/418 (15%), Positives = 130/418 (31%), Gaps = 68/418 (16%)

Query: 269 HRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
             +    +Q +  + R+  K  +Y EI TP       ++          ++   +  D  
Sbjct: 13  LPQESAKWQYVEDFARKTFKKYNYGEIRTPIF---EHYEVISRSVGDTTDIVTKEMYDFY 69

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKS-----YRELPVRLAEFGSVYRNEPSGSLHGLMR 382
            K  R   L+P    G   V    +++       + PV++   GS++R E   +     R
Sbjct: 70  DKGDRHITLRP---EGTAPVVRSYVENKLFAPEVQKPVKVYYMGSMFRYERPQA----GR 122

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD------------FGFEKIMVKLSTR 430
           +R F Q  A  F +        +++  +    +KD             G  +        
Sbjct: 123 LREFHQIGAECFGSSNPA--TDVEMIAMAAQFFKDIGITNVSLELNSLGNPESRAAYRQA 180

Query: 431 PEKRVG------SDALWDDAENIMKGVLDTIKNSSQDRIN-----TGVLLGEGAFYGPKF 479
               +       S       E     VLD+ +   +  +         L  E + Y    
Sbjct: 181 LIDYLTPLKASLSADSQRRLEENPLRVLDSKEPEDKAAVEGAPSILDYLDEESSTYFAAV 240

Query: 480 EYILKD-----------AIGRDWQCGTI----------QVDFNLPSRFNAFYVNSHSEKC 518
             +L+              G D+   TI          Q+      R++         + 
Sbjct: 241 RSMLETLQIPYIINTNMVRGLDYYNHTIFEFTTEVAGSQLTICAGGRYDGLVAYFGGPET 300

Query: 519 HPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSH 578
             V     +    ER + ++  + +G        +   V  + + A   A E+   L++ 
Sbjct: 301 PGVGFGMGL----ERLLLVL--DKQGVKLPIEIALDVYVAVLGAGANGRALELVQALRAQ 354

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
             + E D+ +  +  + +   I K   +I  G+ E     + ++   +     VSL  
Sbjct: 355 GFAAERDYLDRKLKAQFKSADIFKAKTLITLGESEVESGQVTVKNNHNREEITVSLDQ 412


>gi|327490405|gb|EGF22189.1| histidine--tRNA ligase [Streptococcus sanguinis SK1058]
          Length = 426

 Score = 66.0 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 57/418 (13%), Positives = 125/418 (29%), Gaps = 68/418 (16%)

Query: 269 HRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
             +    +Q +  + R+  +  +Y EI TP       ++          ++   +  D  
Sbjct: 13  LPQESAKWQYVEDFARKTFRKYNYGEIRTPIF---EHYEVISRSVGDTTDIVTKEMYDFY 69

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKS-----YRELPVRLAEFGSVYRNEPSGSLHGLMR 382
            K  R   L+P    G   V    +++       + PV++   GS++R E   +     R
Sbjct: 70  DKGDRHITLRP---EGTAPVVRSYVENKLFAPEVQKPVKVYYMGSMFRYERPQA----GR 122

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD------------FGFEKIMVKLSTR 430
           +R F Q  A  F +        +++  +    +KD             G  +        
Sbjct: 123 LREFHQIGAECFGSSNPA--TDVEMIAMAAQFFKDIGITNVSLELNSLGNPESRAAYRQA 180

Query: 431 PEKRVG------SDALWDDAENIMKGVLDTIKNSSQDRIN------TGVLLGEGAFYGP- 477
               +       S       E     VLD+ +   +  +         +     A++   
Sbjct: 181 LIDYLTPLKASLSADSQRRLEENPLRVLDSKEPEDKAAVEGAPSILDYLDEESSAYFAAV 240

Query: 478 -------------------KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC 518
                                +Y          +    Q+      R++         + 
Sbjct: 241 RSMLETLQIPYVINTNMVRGLDYYNHTIFEFTTEVAGSQLTICAGGRYDGLVAYFGGPET 300

Query: 519 HPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSH 578
             V     +    ER + ++  + +G      + +   V  +   A   A E+   L++ 
Sbjct: 301 PGVGFGMGL----ERLLLVL--DKQGVELPIETALDVYVAVLGPGANGRALELVQALRTQ 354

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
             + E D+ +  +  + +   I K   +I  G+ E     + ++   +     VSL  
Sbjct: 355 GFAAERDYLDRKLKAQFKSADIFKAKTLITLGESEVESGQVTVKNNHNREEITVSLDQ 412


>gi|319951616|ref|YP_004162883.1| histidyl-tRNA synthetase [Cellulophaga algicola DSM 14237]
 gi|319420276|gb|ADV47385.1| histidyl-tRNA synthetase [Cellulophaga algicola DSM 14237]
          Length = 458

 Score = 66.0 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 46/353 (13%), Positives = 111/353 (31%), Gaps = 68/353 (19%)

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
             ++  + P +  +   V+R +         R R F Q DA V  +   +     +   L
Sbjct: 113 MHQNEIDFPFKRYQIQPVWRADRPQK----GRFREFYQCDADVVGSDSLLQEV--EFVQL 166

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIM--KGVLDTIKNSSQDRINTGVL 468
             +++ D   + + +K++ R     G   +    +N++     LD +    ++ +   +L
Sbjct: 167 YDAVFADLKLDGVTIKMNNRKIL-AGIAEVIGAKDNLIDFTVALDKLDKIGEEGVKKEML 225

Query: 469 L-----------------------------------GEGAFYGPKFEYILKDAIGRDWQC 493
                                                EGA    +  +I++       Q 
Sbjct: 226 EKGISETAIEKASPLFKLTGTNLEQLDALEKLLSSSEEGAKGVAELRFIIETISELGLQT 285

Query: 494 GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF------------------- 534
            T+ +D  L    N +Y  +  E   P  +     G   R+                   
Sbjct: 286 ATLAIDVTLARGLN-YYTGAIFEVGAPEGVKMGSIGGGGRYDDLTGIFGLKDVSGVGISF 344

Query: 535 ----IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
               I +++E  +         +Q +           A ++   L+   +  +    +  
Sbjct: 345 GLDRIYLVLEELELFPEAIDQSLQVLCVNFGDQEALAALKLVTNLRKQGVKADVYPNSAK 404

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  +++  + + +P +I+ GD+E +  S  ++     + +  SL      +  
Sbjct: 405 MQKQMKYANNRNVPFVILIGDEELANNSFVVKNMKEGSQETYSLDKVAEFVKN 457


>gi|291570922|dbj|BAI93194.1| histidyl-tRNA synthetase [Arthrospira platensis NIES-39]
          Length = 425

 Score = 66.0 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 64/416 (15%), Positives = 121/416 (29%), Gaps = 78/416 (18%)

Query: 276 FQTLISYMRRKIKDD-YEEINTPQVLDQHLWQ--QSGHWDSYRANMFAVKCADDTIKDLR 332
           +Q + S     +    Y+EI TP      L++       D     M+      D     R
Sbjct: 21  WQWVASVAEETLARGNYQEIRTPIFEPTALFERGIGEATDVVGKEMYTFCDRGD-----R 75

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
           +  L+P    G V  +            RL   G ++R E   +     R R F Q    
Sbjct: 76  SITLRPEGTAGVVRAYIERKLHANPGVQRLWYMGPMFRYERPQA----GRQRQFHQLGVE 131

Query: 393 VFCTKEQMF---------------------------------NECLKIHNLIISIYKDFG 419
           V  + +                                        +     ++ +    
Sbjct: 132 VLGSDDPRADVEVIAVAVDILKSLGITNLHLNLNSVGDRTDRQNYRQALVDYLTPFSGEL 191

Query: 420 FEKIMVKLSTRPEKRVGS-DALWDDAENIMKGVLDTIKNSSQ----------------DR 462
            +    +L+  P + + S D    +       +LD +   SQ                  
Sbjct: 192 DQDSRDRLTRNPMRILDSKDERTQEITRNAPSILDYLGERSQSHFERVQYLIKELGISYT 251

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
           +N  ++ G   +    FE I  D   +   CG  + D           V        P +
Sbjct: 252 LNPRLVRGLDYYTHTAFEIISDDLGAQATVCGGGRYDG---------LVQELGGPSVPAV 302

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSI 582
                    ER I ++ +    + P  ++P Q  + +    A      +A  L+   L +
Sbjct: 303 GWAIGL---ERLIILLQQ---LHQPPQVTP-QLYLVSRGEKAEANGLILAQKLRQAGLRV 355

Query: 583 ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           E D      + + +          ++ GD EA   ++ ++   S     ++ +D I
Sbjct: 356 ELDLSGSAFSKQFKRADRSGAGACLVLGDAEAIAGTVNLKWLKSGEQTVLNQVDLI 411


>gi|166364046|ref|YP_001656319.1| seryl-tRNA synthetase [Microcystis aeruginosa NIES-843]
 gi|189083574|sp|B0JTT9|SYS_MICAN RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|166086419|dbj|BAG01127.1| seryl-tRNA synthetase [Microcystis aeruginosa NIES-843]
          Length = 427

 Score = 66.0 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 66/189 (34%), Gaps = 16/189 (8%)

Query: 271 KGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
            G  + + LI++M  R I   Y E+  P +++    + +G    +     + KC DD   
Sbjct: 174 LGAALERALINFMLDRHIVAGYTEVLPPILINSDSLRGTGQLPKFAEE--SFKCRDD--- 228

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGF 386
                 L P        ++   + S  +LP++   +   +R E         GL+R+  F
Sbjct: 229 ---ELWLAPTAEVPVTNLYRDEILSSEQLPIKHCAYTPCFRREAGSYGKDTRGLIRLHQF 285

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALWD 442
            + +       +    E   +     +I +       +++L +              +W 
Sbjct: 286 NKVEMVKIVHPDASAQEHESLVANAEAILQALQLPYRVIELCSGDLGFSAAKCYDLEVWL 345

Query: 443 DAENIMKGV 451
            + N  + +
Sbjct: 346 PSANTYREI 354


>gi|332981512|ref|YP_004462953.1| histidyl-tRNA synthetase [Mahella australiensis 50-1 BON]
 gi|332699190|gb|AEE96131.1| histidyl-tRNA synthetase [Mahella australiensis 50-1 BON]
          Length = 420

 Score = 66.0 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 62/415 (14%), Positives = 134/415 (32%), Gaps = 54/415 (13%)

Query: 269 HRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
                  +Q + S++R       Y+EI TP        +          ++   +     
Sbjct: 13  LPDEIYKWQYVESFIRHWTALFGYKEIRTPVF---EHTELFQRGVGDTTDIVQKEMYTFE 69

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYREL-PVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
            K  R+  LKP    G V  +    K Y E  P++L     ++R E   +     R+R  
Sbjct: 70  DKGNRSITLKPEGTAGVVRAY-IEHKLYAEAQPIKLYYLSPIFRYERPQA----GRLREH 124

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK---IMVKLSTRPEKRVGSDALWDD 443
            Q     F +     +   +I +L +S+  D G +     +  +  +  + V   AL D 
Sbjct: 125 HQFGVESFGSYGPSIDA--EIVDLAMSLLNDLGLKDLEIHINSIGCKQCRPVYHKALMDY 182

Query: 444 AENIMKGVLDTIKNSSQDR----------------------INTGVLLGEGAFY------ 475
             + +  + DT ++                           ++      +  F       
Sbjct: 183 LADRLDQLCDTCRSRYDKNPLRILDCKEKGCQAVLTDAPDIVDYLCDDCKKHFDSFQDYL 242

Query: 476 ---GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH------SEKCHPVMIHRA 526
              G K+E   +   G D+   T+    +   R                +   P +    
Sbjct: 243 SAMGYKYEIDPRIVRGLDYYTRTVFEILSTDERSPGTICGGGRYDDLVEQCGGPSIPGAG 302

Query: 527 VFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF 586
               +ER +  +  + +G +          +  +   A  Y+  +A++L+   +S+E D 
Sbjct: 303 FGMGLERLL--LCMDSQGIIIPVPKGPDLFIAAVGEQAYHYSIGLASMLRKRDISVEIDH 360

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
              ++  + +     K   +++ G  E +   +  +   +   Q++ L +    L
Sbjct: 361 VARSLKGQFKYADKLKAQYVLVIGSDEMASGHVSCKNMSTGQEQRMELDNIAERL 415


>gi|327458581|gb|EGF04931.1| histidine--tRNA ligase [Streptococcus sanguinis SK1]
          Length = 426

 Score = 66.0 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 62/418 (14%), Positives = 130/418 (31%), Gaps = 68/418 (16%)

Query: 269 HRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
             +    +Q +  + R+  +  +Y EI TP       ++          ++   +  D  
Sbjct: 13  LPQESAKWQYVEDFARKTFRKYNYGEIRTPIF---EHYEVISRSVGDTTDIVTKEMYDFY 69

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKS-----YRELPVRLAEFGSVYRNEPSGSLHGLMR 382
            K  R   L+P    G   V    +++       + PV++   GS++R E   +     R
Sbjct: 70  DKGDRHITLRP---EGTAPVVRSYVENKLFAPEVQKPVKVYYMGSMFRYERPQA----GR 122

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD------------FGFEKIMVKLSTR 430
           +R F Q  A  F +        +++  +    + D             G  +        
Sbjct: 123 LREFHQIGAECFGSSNPA--TDVEMITMAAQFFNDIGITNVSLELNSLGNPESRAAYRQA 180

Query: 431 PEKRVG------SDALWDDAENIMKGVLDTIKNSSQDRIN-----TGVLLGEGAFYGPKF 479
               +       S       E     VLD+ +   +  +         L  E + Y    
Sbjct: 181 LIDYLTPLKASLSADSQRRLEENPLRVLDSKEPEDKAAVEGAPSVLDYLDEESSIYFAAV 240

Query: 480 EYILKD-----------AIGRDWQCGTI----------QVDFNLPSRFNAFYVNSHSEKC 518
             +L+              G D+   TI          Q+      R++         + 
Sbjct: 241 RSMLETLQIPYVINTNMVRGLDYYNHTIFEFTTEVAGSQLTICAGGRYDGLVAYFGGPET 300

Query: 519 HPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSH 578
             V     +    ER + ++  + +G      + +   V  + + A   A E+   L++ 
Sbjct: 301 PGVGFGMGL----ERLLLVL--DKQGVDLPIETALDVYVAVLGAGANSRALELVQALRAQ 354

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
             + E D+ +  +  + +   I K   +I  G+ E     + ++   +     VSL  
Sbjct: 355 GFAAERDYLDRKLKAQFKSADIFKSKTLITLGESEVENGQVTVKNNHNREEITVSLDQ 412


>gi|258540068|ref|YP_003174567.1| seryl-tRNA synthetase [Lactobacillus rhamnosus Lc 705]
 gi|257151744|emb|CAR90716.1| Seryl-tRNA synthetase [Lactobacillus rhamnosus Lc 705]
          Length = 427

 Score = 66.0 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 48/337 (14%), Positives = 109/337 (32%), Gaps = 20/337 (5%)

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ-GEWFDL 182
           +++ E+IA D    K  +  E+ +           V       A E +   R+ G+    
Sbjct: 26  EEIDELIALDEKRRKVTVQTEELKAKRNEVSGQIAVMKRNKENADEQIAAMREVGQKISQ 85

Query: 183 CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESE 242
                     +V        V    +  D     L+    +    +     +  F  +  
Sbjct: 86  LDKELAELNEKVTYIL----VRLPNFPADDVPMSLNE-DDSREEYKWGNIPHFDFQPKHH 140

Query: 243 KRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQVLD 301
                KL            GS  +++   G ++ + + ++ +    K+ YEEI  P +++
Sbjct: 141 WDIGEKLGILDFERAAKVSGSRFVYYKGAGARLERAVYNFFLDEHQKEGYEEIIPPYLVN 200

Query: 302 QHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVR 361
                 +G +  +    + +        D     + P      V  +   +    +LPV 
Sbjct: 201 NDSMFGTGQFPKFTDATYTIT------NDGEPLTMIPTAEVPLVNYYRGDIMDAAKLPVN 254

Query: 362 LAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
                  +R+E   +     GL+R+  F + +   FC  E  + E   + +    + +  
Sbjct: 255 FTALTPAFRSEAGSAGRDTRGLIRMHQFNKVEMVKFCKPEDSWKELKNLIHDAEDLLRKL 314

Query: 419 GFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
           G    ++ L++              +W  A++  + +
Sbjct: 315 GLPHHVITLASNDASFTSAKTNDLEVWFPAQDRYREI 351


>gi|228941572|ref|ZP_04104120.1| Histidyl-tRNA synthetase 2 [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228974501|ref|ZP_04135068.1| Histidyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228981095|ref|ZP_04141396.1| Histidyl-tRNA synthetase 2 [Bacillus thuringiensis Bt407]
 gi|228778636|gb|EEM26902.1| Histidyl-tRNA synthetase 2 [Bacillus thuringiensis Bt407]
 gi|228785218|gb|EEM33230.1| Histidyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228818079|gb|EEM64156.1| Histidyl-tRNA synthetase 2 [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|326942185|gb|AEA18081.1| histidyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 423

 Score = 66.0 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 69/413 (16%), Positives = 134/413 (32%), Gaps = 55/413 (13%)

Query: 275 IFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           ++Q +    R   +  +Y+EI TP        +          ++   +      +  R+
Sbjct: 19  LWQYIEGQAREICRRYNYKEIRTPIF---EHTELFLRGVGDTTDIVQKEMYSFQDRGERS 75

Query: 334 FALKPM-NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
             L+P    P   +   + +      P +L   G ++R E   +     R R F Q    
Sbjct: 76  LTLRPEGTAPVVRSYVENKMFGDATQPTKLYYIGQMFRYERPQA----GRYRQFVQFGIE 131

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKI---MVKLSTRPEKRVGSDALWDDAENIMK 449
              + +   +   ++  L +  Y+  G + I   +  L     ++   DAL    E  + 
Sbjct: 132 AIGSNDPAIDA--EVIALAVEFYRGMGLKNIKVVLNSLGDAASRQAHRDALIAHFEPRIG 189

Query: 450 GVLDTIKNSSQDRIN--------------------TGVLLGEGAFYGPK----------- 478
                 ++  +                        T  L  + A Y  K           
Sbjct: 190 EFCSDCQSRLEKNPLRILDCKKDRNHELMATAPSITEYLNEDSAVYYDKVQELLTMMDVP 249

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS--------EKCHPVMIHRAVFGS 530
           FE       G D+   T+    +    F A    S          E   P M       S
Sbjct: 250 FEKDPNLVRGLDYYQHTVFEIMSEAEGFGAITTLSGGGRYNGLVQEIGGPEMPGIGFAMS 309

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
           IER I  + +     LPL    I   V  +   A ++A ++A  L+   LS+E D+ +  
Sbjct: 310 IERLIMAL-KAENIELPLE-HSIDCYVVALGEKAKDHAAKVAFDLRKAGLSVEKDYLDRK 367

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  + +     K   + + G+ E  +  I ++   +   ++V+L      + +
Sbjct: 368 MKAQFKSADRLKAKFVAVLGEDELDKGIINLKDMATGEQEEVALDVFASYVAE 420


>gi|168240814|ref|ZP_02665746.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL486]
 gi|194451035|ref|YP_002044956.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|238690614|sp|B4TD24|SYS_SALHS RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|194409339|gb|ACF69558.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|205340363|gb|EDZ27127.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL486]
          Length = 430

 Score = 66.0 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 63/188 (33%), Gaps = 10/188 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M     +   Y E   P +++      +G    +  ++F  +  ++   D
Sbjct: 170 ARMHRALSQFMLDLHTEQHGYSENYVPYLVNHDTLYGTGQLPKFAGDLFHTRPLEEEA-D 228

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
              +AL P        +    +    +LP+++      +R+E         GL+R+  F 
Sbjct: 229 SSNYALIPTAEVPLTNLVRDEIIDEDQLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFD 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E       ++      + +  G     + L T              +W  
Sbjct: 289 KVEMVQIVRPEDSMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMGFGACKTYDLEVWVP 348

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 349 AQNTYREI 356


>gi|15922999|ref|NP_370533.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50]
 gi|15925714|ref|NP_373247.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus N315]
 gi|148266456|ref|YP_001245399.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|150392489|ref|YP_001315164.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|156978340|ref|YP_001440599.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
 gi|253316847|ref|ZP_04840060.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           CF-Marseille]
 gi|254663943|ref|ZP_05143415.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Mu50-omega]
 gi|257793547|ref|ZP_05642526.1| seryl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|258411147|ref|ZP_05681426.1| seryl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|258420949|ref|ZP_05683883.1| seryl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|258438588|ref|ZP_05689811.1| seryl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|258443956|ref|ZP_05692294.1| seryl-tRNA synthetase [Staphylococcus aureus A8115]
 gi|258446228|ref|ZP_05694388.1| seryl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|258449113|ref|ZP_05697219.1| seryl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|258454409|ref|ZP_05702377.1| seryl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|269201699|ref|YP_003280968.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98]
 gi|282894288|ref|ZP_06302518.1| seryl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|282927759|ref|ZP_06335373.1| seryl-tRNA synthetase [Staphylococcus aureus A10102]
 gi|295406873|ref|ZP_06816677.1| seryl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|296275678|ref|ZP_06858185.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus MR1]
 gi|297245908|ref|ZP_06929770.1| seryl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|46577645|sp|P61083|SYS_STAAM RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|46577646|sp|P99178|SYS_STAAN RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|166223293|sp|A7WWP0|SYS_STAA1 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|189083590|sp|A6TXF9|SYS_STAA2 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|189083591|sp|A5INQ0|SYS_STAA9 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|13699926|dbj|BAB41225.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus N315]
 gi|14245776|dbj|BAB56171.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50]
 gi|147739525|gb|ABQ47823.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|149944941|gb|ABR50877.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|156720475|dbj|BAF76892.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
 gi|257787519|gb|EEV25859.1| seryl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|257840032|gb|EEV64497.1| seryl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|257843139|gb|EEV67554.1| seryl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|257848147|gb|EEV72139.1| seryl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|257850840|gb|EEV74784.1| seryl-tRNA synthetase [Staphylococcus aureus A8115]
 gi|257855054|gb|EEV77997.1| seryl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|257857546|gb|EEV80441.1| seryl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|257863503|gb|EEV86263.1| seryl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|262073989|gb|ACY09962.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98]
 gi|282590519|gb|EFB95597.1| seryl-tRNA synthetase [Staphylococcus aureus A10102]
 gi|282763333|gb|EFC03463.1| seryl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|285815736|gb|ADC36223.1| Seryl-tRNA synthetase [Staphylococcus aureus 04-02981]
 gi|294968338|gb|EFG44363.1| seryl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|297177273|gb|EFH36526.1| seryl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|312828572|emb|CBX33414.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus ECT-R 2]
 gi|315129552|gb|EFT85544.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS03]
 gi|329725506|gb|EGG61985.1| serine--tRNA ligase [Staphylococcus aureus subsp. aureus 21172]
          Length = 428

 Score = 66.0 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 52/357 (14%), Positives = 123/357 (34%), Gaps = 35/357 (9%)

Query: 106 YDFDKEQPFSSDELAQIEKKMQEIIA--RDSPFLKQYLSHEKARELFESKKEAYKVEILE 163
            +   + P   DE+ +++++ +++I+   +    +  +S E A +    +     +  + 
Sbjct: 18  IELRGDDPKVVDEILELDEQRRKLISATEEMKARRNKVSEEIALKKRNKENADDVIAEMR 77

Query: 164 SIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
           ++         +  E  D         TG + +   L+         D +   + + +GT
Sbjct: 78  TLGDDIKEKDSQLNE-IDNKM------TGILCRIPNLISDDVPQGESDEDNVEVKK-WGT 129

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYM 283
                 E   +   +EE +  D  + A+      +             G ++ + L++YM
Sbjct: 130 PREFSFEPKAHWDIVEELKMADFDRAAKVSGARFVYLTNE--------GAQLERALMNYM 181

Query: 284 RRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
             K   +  Y E+  PQ+++      +G    +  ++F V        +       P   
Sbjct: 182 ITKHTTQHGYTEMMVPQLVNADTMYGTGQLPKFEEDLFKV--------EKEGLYTIPTAE 233

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKE 398
                 + + +     LP +     + +R+E   +     GL+R+  F + +   F   E
Sbjct: 234 VPLTNFYRNEIIQPGVLPEKFTGQSACFRSEAGSAGRDTRGLIRLHQFDKVEMVRFEQPE 293

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
             +N   ++     +I ++ G     V L T              +W  + N  K +
Sbjct: 294 DSWNALEEMTTNAEAILEELGLPYRRVILCTGDIGFSASKTYDIEVWLPSYNDYKEI 350


>gi|302148840|pdb|3NET|A Chain A, Crystal Structure Of Histidyl-Trna Synthetase From Nostoc
           Sp. Pcc 7120
 gi|302148841|pdb|3NET|B Chain B, Crystal Structure Of Histidyl-Trna Synthetase From Nostoc
           Sp. Pcc 7120
          Length = 465

 Score = 66.0 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 57/454 (12%), Positives = 135/454 (29%), Gaps = 76/454 (16%)

Query: 261 DGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDS---YRA 316
             SG   +     ++   L+  +RR  +   +  I TP V    + Q  G+      Y  
Sbjct: 14  TPSGFPEFLPSEKRLELYLLDTIRRVYESYGFTPIETPAVERLEVLQAKGNQGDNIIYGL 73

Query: 317 N--MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL--PVRLAEFGSVYRNE 372
              +   + A+           + +     V +  +  +   +L  P    +   V+R E
Sbjct: 74  EPILPPNRQAEKDKSGDTGSEARALKFDQTVPLAAYIARHLNDLTFPFARYQXDVVFRGE 133

Query: 373 PSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
            +       R R F Q D  V   ++       +   +I  I++       +++++ R  
Sbjct: 134 RAKD----GRFRQFRQCDIDVVGREKLSLLYDAQXPAIITEIFEAVNIGDFVIRINNRKV 189

Query: 433 KRVGSDALWDDAENIMKG---VLDTIKNSSQDRINTGVLLG-------EGAFYGPKFEYI 482
              G     + +E  +K    ++D ++   + ++   +          +      K +  
Sbjct: 190 L-TGFFQSLNISETQIKSCISIIDNLEKIGEAKVKLELEKEGINPEQTQKIIDFVKIDGS 248

Query: 483 LKDAIGR---------------------DWQCGTIQVDFNLPSRFNAFYVNSHSEK---- 517
           + D + +                     +     ++       RF      +        
Sbjct: 249 VDDVLDKLKHLSQTLPESEQFNLGVSELETVITGVRNLGVPDKRFCIDLAIARGLNYYTG 308

Query: 518 --------CHPVMIHRAVFGSIERFIGIMIENFKGNLPLW-------------------- 549
                    H  +      G  E  +G  I      + +                     
Sbjct: 309 TVYETTLIGHEALGSICSGGRYEELVGTFIGEKXPGVGISIGLTRLISRLLKAGILNTLP 368

Query: 550 LSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIIC 609
            +P Q +V            +++  L+   L++ T+F    +  + +    + I   +I 
Sbjct: 369 PTPAQVVVVNXQDELXPTYLKVSQQLRQAGLNVITNFEKRQLGKQFQAADKQGIRFCVII 428

Query: 610 GDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           G  EA+ +   ++   S    +V+L D    + +
Sbjct: 429 GADEAAAQKSSLKDLQSGEQVEVALADLAEEIKR 462


>gi|168236873|ref|ZP_02661931.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|194735850|ref|YP_002114015.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|238693663|sp|B4TRS5|SYS_SALSV RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|194711352|gb|ACF90573.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|197290153|gb|EDY29510.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
          Length = 430

 Score = 66.0 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 63/188 (33%), Gaps = 10/188 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M     +   Y E   P +++      +G    +  ++F  +  ++   D
Sbjct: 170 ARMHRALSQFMLDLHTEQHGYSENYVPYLVNHDTLYGTGQLPKFAGDLFHTRPLEEEA-D 228

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
              +AL P        +    +    +LP+++      +R+E         GL+R+  F 
Sbjct: 229 SSNYALIPTAEVPLTNLVRDEIIDEDQLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFD 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E       ++      + +  G     + L T              +W  
Sbjct: 289 KVEMVQIVRPEDSMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMGFGACKTYDLEVWVP 348

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 349 AQNTYREI 356


>gi|134297896|ref|YP_001111392.1| seryl-tRNA synthetase [Desulfotomaculum reducens MI-1]
 gi|172044203|sp|A4J0G4|SYS_DESRM RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|134050596|gb|ABO48567.1| seryl-tRNA synthetase [Desulfotomaculum reducens MI-1]
          Length = 424

 Score = 66.0 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 42/244 (17%), Positives = 88/244 (36%), Gaps = 22/244 (9%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIF 276
           G   N   E+ ++        E + H  L  ++++          G+   F+   G ++ 
Sbjct: 114 GKDENDNVEIRRWGKPRGFEFEPKPHWDLGEDLNILDFERGGKVTGARFSFYKGMGARLE 173

Query: 277 QTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           + LI++M         Y EI  P +++      +G    +  +MF +        +   +
Sbjct: 174 RALINFMLDLHTREHGYTEIFPPFIVNGDSMLGTGQLPKFAEDMFKL--------EGLNY 225

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDA 391
            L P        ++   + +  +LP+    + + +R E   +     GL+R   F + + 
Sbjct: 226 YLIPTAEVPVTNLYRDEILAEEQLPIYHCAYSACFRAEAGAAGRDTRGLIRQHQFNKVEL 285

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENI 447
             F   E+ F+E  ++      I +  G    +V LST              +W  + N 
Sbjct: 286 VKFSKPEESFDELERLTANAEKILQALGLPYRVVLLSTGDMGFTSAKTYDLEVWLPSYNA 345

Query: 448 MKGV 451
            K +
Sbjct: 346 YKEI 349


>gi|253827922|ref|ZP_04870807.1| Seryl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|253511328|gb|EES89987.1| Seryl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
          Length = 430

 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/228 (14%), Positives = 80/228 (35%), Gaps = 18/228 (7%)

Query: 242 EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINT 296
             ++H +LA +              S    +     K+ + LI+YM     +  + E+ T
Sbjct: 136 TPKEHWELAEQNGWIDFERGVKLAKSRFSVFMGMAAKLERALINYMLDFNTQRGFSEVGT 195

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD------LRTFALKPMNCPGHVAVFNH 350
           P +++  +   +G    +  ++F +   ++   D           L P        ++N+
Sbjct: 196 PVIVNSQILFGTGQLPKFENDLFKISDFEEEELDSKEAKKGHELYLIPTAEVTLTNLYNN 255

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
            +    +LP+ +  +   +R E   +     G++R   F + +     T +       ++
Sbjct: 256 EILKEEDLPLMMTAYTPCFRKEAGSAGRDTRGIIRQHQFDKVELVAITTPQDSDIMQERM 315

Query: 408 HNLIISIYKDFGFEKIMVKLSTRPEKRVGSD----ALWDDAENIMKGV 451
                 +    G    +V+L +       S+     +W   +N  + +
Sbjct: 316 VACASDLLTSLGLPHRLVQLCSGDLGFSASNTIDIEVWLPGQNCYREI 363


>gi|159027764|emb|CAO89634.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 427

 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 66/189 (34%), Gaps = 16/189 (8%)

Query: 271 KGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
            G  + + LI++M  R I   Y E+  P +++    + +G    +     + KC DD   
Sbjct: 174 LGAALERALINFMLDRHIVAGYTEVLPPILINSDSLRGTGQLPKFAEE--SFKCRDD--- 228

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGF 386
                 L P        ++   + S  +LP++   +   +R E         GL+R+  F
Sbjct: 229 ---ELWLAPTAEVPVTNLYRDEILSSEQLPIKHCAYTPCFRREAGSYGKDTRGLIRLHQF 285

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALWD 442
            + +       +    E   +     +I +       +++L T              +W 
Sbjct: 286 NKVEMVKIVHPDASAQEHESLVANAEAILQALQLPYRVIELCTGDLGFSAAKCYDLEVWL 345

Query: 443 DAENIMKGV 451
            + N  + +
Sbjct: 346 PSANTYREI 354


>gi|110798993|ref|YP_694487.1| seryl-tRNA synthetase [Clostridium perfringens ATCC 13124]
 gi|123050143|sp|Q0TV53|SYS_CLOP1 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|110673640|gb|ABG82627.1| seryl-tRNA synthetase [Clostridium perfringens ATCC 13124]
          Length = 425

 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 50/336 (14%), Positives = 110/336 (32%), Gaps = 40/336 (11%)

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKE-NVTLY 174
            +E  +I   ++ +  + +    +    +KA E       A   EI   I A +  V   
Sbjct: 37  DEERRKILVDVEALKKQRNEVSAEIPKRKKAGEDVTEV-MAEMREIGGKIKADDAKVAEL 95

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
                + + R P++ +    +       V    W             G       E   +
Sbjct: 96  NDKINYIMLRIPNIPNPAVPEGETDEDNVEIKRW-------------GEPTKFNFEPKAH 142

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI--KDDYE 292
                + +  D  +  +          G         G ++ +++I+Y   K   ++ Y 
Sbjct: 143 WDLGTDLDLLDFERGGKVAGSRFTVYKGM--------GARLERSIINYFLDKHTFENGYT 194

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P ++++     +G    +  + F V        +   + L P        ++ +  
Sbjct: 195 EVLPPYMVNRDSMTGTGQLPKFEEDAFKV--------ENNGYFLIPTAEVPVTNMYRNET 246

Query: 353 KSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
               +LP++ A + + +R E   +     GL+R   F + +   FC  EQ + E  K+  
Sbjct: 247 LEGDKLPIKHAAYSACFRAEAGSAGRDTRGLIRQHQFNKVELVKFCKPEQSYEELDKLVQ 306

Query: 410 LIISIYKDFGFEKIMVKLSTRPEKRV----GSDALW 441
              S+ +  G    +V++                +W
Sbjct: 307 DAESVLQGLGLPYRIVRICKGDLGFTAALKYDIEVW 342


>gi|329732416|gb|EGG68766.1| serine--tRNA ligase [Staphylococcus aureus subsp. aureus 21193]
          Length = 428

 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 52/357 (14%), Positives = 123/357 (34%), Gaps = 35/357 (9%)

Query: 106 YDFDKEQPFSSDELAQIEKKMQEIIA--RDSPFLKQYLSHEKARELFESKKEAYKVEILE 163
            +   + P   DE+ +++++ +++I+   +    +  +S E A +    +     +  + 
Sbjct: 18  IELRGDDPKVVDEILELDEQRRKLISATEEMKARRNKVSEEIALKKRNKENADDVIAEMR 77

Query: 164 SIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
           ++         +  E  D         TG + +   L+         D +   + + +GT
Sbjct: 78  TLGDDIKEKDSQLNE-IDNKM------TGILCRIPNLISDDVPQGESDEDNVEVKK-WGT 129

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYM 283
                 E   +   +EE +  D  + A+      +             G ++ + L++YM
Sbjct: 130 PREFSFEPKAHWDIVEELKMADFDRAAKVSGARFVYLTNE--------GAQLERALMNYM 181

Query: 284 RRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
             K   +  Y E+  PQ+++      +G    +  ++F V        +       P   
Sbjct: 182 ITKHTTQHGYTEMMVPQLVNADTMYGTGQLPKFEEDLFKV--------EKEGLYTIPTAE 233

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKE 398
                 + + +     LP +     + +R+E   +     GL+R+  F + +   F   E
Sbjct: 234 VPLTNFYRNEIIQPGVLPEKFTGQSACFRSEAGSAGRDTRGLIRLHQFDKVEMVRFEQPE 293

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
             +N   ++     +I ++ G     V L T              +W  + N  K +
Sbjct: 294 DSWNALEEMTTNAEAILEELGLPYRRVILCTGDIGFSASKTYDLEVWLPSYNDYKEI 350


>gi|308376989|ref|ZP_07440772.2| glycyl-tRNA synthetase glyS [Mycobacterium tuberculosis SUMu008]
 gi|308349250|gb|EFP38101.1| glycyl-tRNA synthetase glyS [Mycobacterium tuberculosis SUMu008]
          Length = 470

 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 54/360 (15%), Positives = 111/360 (30%), Gaps = 58/360 (16%)

Query: 307 QSGHWDS-YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAE 364
           + G W      NM           +     L+P    G    F + + +  ++ P  + +
Sbjct: 139 EPGQWTQPREFNMMLKTYLGPIETEEGLHYLRPETAQGIFVNFANVVTTARKKPPFGIGQ 198

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
            G  +RNE +   + + R R F Q +   F              +  +  Y D G  +  
Sbjct: 199 IGKSFRNEITPG-NFIFRTREFEQMEMEFFVEPATAKEWHQYWIDNRLQWYIDLGIRREN 257

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLD-TIKNSSQDRI---NTGVLLGEGAFYGPKFE 480
           ++             LW+  ++ +    D T+    +        G L G          
Sbjct: 258 LR-------------LWEHPKDKLSHYSDRTVDIEYKFGFMGNPWGELEG---------- 294

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI- 539
             + +    D          +L      FY   +  +  P +I     G    F+  +I 
Sbjct: 295 --VANRTDFDLSTHARHSGVDLS-----FYDQINDVRYTPYVIE-PAAGLTRSFMAFLID 346

Query: 540 ---ENFKGNL------------PLWLSPIQAIVTTIT--SSAVEYAQEIANLLKSHHLSI 582
              E+   N                L+P++A V  ++  +     A+++   L+    +I
Sbjct: 347 AYTEDEAPNTKGGMDKRTVLRLDPRLAPVKAAVLPLSRHADLSPKARDLGAELRKC-WNI 405

Query: 583 ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           + D     I  + R       P  +        + ++ +R   + T  +V++      L 
Sbjct: 406 DFDDAGA-IGRRYRRQDEVGTPFCVTVDFDSLQDNAVTVRERDAMTQDRVAMSSVADYLA 464


>gi|196230472|ref|ZP_03129334.1| seryl-tRNA synthetase [Chthoniobacter flavus Ellin428]
 gi|196225402|gb|EDY19910.1| seryl-tRNA synthetase [Chthoniobacter flavus Ellin428]
          Length = 423

 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/244 (14%), Positives = 79/244 (32%), Gaps = 22/244 (9%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIF 276
           GT       +  +      +   + H  L +++ L          GSG   +  +G ++ 
Sbjct: 116 GTTAEDNPVVRTWGEKPAFAFTPKSHVDLGKDLGLLDFERATKISGSGFALYTGQGARLE 175

Query: 277 QTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           + LI+++         Y E++ P +++      +     +    +          +    
Sbjct: 176 RALINFLLDLHTREHGYGEVSPPFLVNSDALVGTTQLPKFEEQQYRC--------ERDDM 227

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDA 391
            L P        +    +    +LP+R A +   +R E   +     GL+R+  F + + 
Sbjct: 228 YLVPTAEVPVTNLHREEILRQEQLPIRYAAYTPCFRREAGAAGLGTRGLIRIHQFDKVEL 287

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENI 447
               T E  F E   +      + +  G    +++L T              +W   +N 
Sbjct: 288 VKITTPETSFAELESLTANAEKVLQLLGLHYRVIELCTGDIGFGSAKTYDIEVWAPGQNA 347

Query: 448 MKGV 451
              V
Sbjct: 348 YLEV 351


>gi|170717275|ref|YP_001784390.1| alanyl-tRNA synthetase [Haemophilus somnus 2336]
 gi|205830062|sp|B0UTE1|SYA_HAES2 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|168825404|gb|ACA30775.1| alanyl-tRNA synthetase [Haemophilus somnus 2336]
          Length = 874

 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 62/142 (43%), Gaps = 10/142 (7%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSS 116
           +I  +   + R    + HS  H++  A++ +        G ++ D    +DF + +  S 
Sbjct: 546 TINAVVDTEHRIKTSLNHSATHLLHAALRQVLGSHVAQKGSLVSDTILRFDFAQPEAISQ 605

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
           ++L +IE  + + I  +   + + +  ++A+          K          + V + + 
Sbjct: 606 EQLFEIECLVNQHIRANHLVVTEVMPIDEAKAKGAMALFGEKY--------GDVVRVVKM 657

Query: 177 GEW-FDLCRGPHVRSTGQVKKF 197
           GE+  +LC G HV+ TG++  F
Sbjct: 658 GEFSIELCGGIHVKRTGEIGLF 679


>gi|116630183|ref|YP_815355.1| seryl-tRNA synthetase [Lactobacillus gasseri ATCC 33323]
 gi|311110225|ref|ZP_07711622.1| serine--tRNA ligase [Lactobacillus gasseri MV-22]
 gi|122272880|sp|Q041F5|SYS_LACGA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|116095765|gb|ABJ60917.1| seryl-tRNA synthetase [Lactobacillus gasseri ATCC 33323]
 gi|311065379|gb|EFQ45719.1| serine--tRNA ligase [Lactobacillus gasseri MV-22]
          Length = 436

 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 77/188 (40%), Gaps = 9/188 (4%)

Query: 272 GWKIFQTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G  + + + ++ +    KD Y E+  P +++    Q +G +  +  +++ +   DD  K 
Sbjct: 170 GALLERAVSNFFLDENTKDGYTEVIPPYLVNDASMQGTGQFPKFTEDVYTIVDNDDPDKP 229

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFT 387
            R   L P      V  F   +   ++LP+ +  F   +R+E   +     GL+R+  F 
Sbjct: 230 -RDLTLIPTAEVPLVNYFRGKILDAKQLPINVTAFSPAFRSEAGSAGRDTRGLIRMHEFR 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +      ++  ++E  K+ +    + +  G    +V LST              +W  
Sbjct: 289 KVEMVKIVDEDSSWDELEKLTHNAEHLLQKLGLPYHVVALSTGDASFTSAKTYDLEVWMP 348

Query: 444 AENIMKGV 451
           A++  + +
Sbjct: 349 AQDKYREI 356


>gi|255349124|ref|ZP_05381131.1| seryl-tRNA synthetase [Chlamydia trachomatis 70]
 gi|255503661|ref|ZP_05382051.1| seryl-tRNA synthetase [Chlamydia trachomatis 70s]
 gi|255507340|ref|ZP_05382979.1| seryl-tRNA synthetase [Chlamydia trachomatis D(s)2923]
 gi|289525773|emb|CBJ15254.1| seryl-tRNA synthetase [Chlamydia trachomatis Sweden2]
 gi|296435348|gb|ADH17526.1| seryl-tRNA synthetase [Chlamydia trachomatis E/150]
 gi|296439065|gb|ADH21218.1| seryl-tRNA synthetase [Chlamydia trachomatis E/11023]
          Length = 428

 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/249 (15%), Positives = 82/249 (32%), Gaps = 20/249 (8%)

Query: 210 GDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWH 269
            D     + + +G           ++   E  +  D +  A+       A    GV+   
Sbjct: 115 PDKTGNQVIKSHGEVPTFPFPPKHHMQLNEALQILDFKLPAKTTGSGWPAYCNEGVL--- 171

Query: 270 RKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
              W +   L++   ++    ++    P ++ + +   SG    +    + V+  D    
Sbjct: 172 -LEWALLTYLLN---KQQAHGFQLWLPPLLVKRDILFGSGQIPKFDGQYYRVEDGD---- 223

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG---SLHGLMRVRGF 386
             ++  L P          +  + + ++LP+  A F   +R E         GL+RV  F
Sbjct: 224 --QSLFLIPTAEVVLNGFHSQEILNEQDLPLCYAAFTPCFRREAGAGGAHERGLVRVHQF 281

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG----SDALWD 442
            + +   F T EQ      K+ +++  I  +      +  LST              +W 
Sbjct: 282 HKVEMFAFTTPEQEEVVYQKMLHVVEEILSELQLPYQLSLLSTGDMSFTAKKTIDAEVWL 341

Query: 443 DAENIMKGV 451
             +     V
Sbjct: 342 PGQKAFYEV 350


>gi|228954688|ref|ZP_04116711.1| Histidyl-tRNA synthetase 2 [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228805015|gb|EEM51611.1| Histidyl-tRNA synthetase 2 [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
          Length = 423

 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 72/413 (17%), Positives = 139/413 (33%), Gaps = 55/413 (13%)

Query: 275 IFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           ++Q +    R   +  +Y+EI TP        +          ++   +      +  R+
Sbjct: 19  LWQYIEGQAREICRRYNYKEIRTPIF---EHTELFLRGVGDTTDIVQKEMYSFQDRGERS 75

Query: 334 FALKPM-NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
             L+P    P   +   + +      P +L   G ++R E   +     R R F Q    
Sbjct: 76  LTLRPEGTAPVVRSYVENKMFGDATQPTKLYYIGQMFRYERPQA----GRYRQFVQFGIE 131

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKI---MVKLSTRPEKRVGSDALWDDAENIMK 449
              + +   +   ++  L +  Y+  G + I   +  L     ++   DAL    E  + 
Sbjct: 132 AIGSNDPAIDA--EVIALAVEFYRGMGLKNIKVVLNSLGDAASRQAHRDALIAHFEPRIG 189

Query: 450 G---------------VLDTIKNSSQDRINT-----GVLLGEGAFYGPK----------- 478
                           +LD  K+ + + + T       L  + A Y  K           
Sbjct: 190 EFCSDCQSRLEKNPLRILDCKKDRNHELMGTAPSITEYLNEDSAIYYDKVQELLTMMNVP 249

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS--------EKCHPVMIHRAVFGS 530
           FE       G D+   T+    +    F A    S          E   P M       S
Sbjct: 250 FEKDPNLVRGLDYYQHTVFEIMSEAEGFGAITTLSGGGRYNGLVQEIGGPEMPGIGFAMS 309

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
           IER I  + +     LPL    I   V  +   A ++A ++A  L+   LS+E D+ +  
Sbjct: 310 IERLIMAL-KAENIELPLE-HSIDCYVVALGEKAKDHAAKVAFDLRKAGLSVEKDYLDRK 367

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  + +     K   + + G+ E  +  I ++   +   ++V+L      + +
Sbjct: 368 MKAQFKSADRLKAKFVAVLGEDELDKGIINLKDMATGEQEEVALDVFASYVAE 420


>gi|224418974|ref|ZP_03656980.1| seryl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
          Length = 442

 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/228 (14%), Positives = 80/228 (35%), Gaps = 18/228 (7%)

Query: 242 EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINT 296
             ++H +LA +              S    +     K+ + LI+YM     +  + E+ T
Sbjct: 148 TPKEHWELAEQNGWIDFERGVKLAKSRFSVFMGMAAKLERALINYMLDFNTQRGFSEVGT 207

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD------LRTFALKPMNCPGHVAVFNH 350
           P +++  +   +G    +  ++F +   ++   D           L P        ++N+
Sbjct: 208 PVIVNSQILFGTGQLPKFENDLFKISDFEEEELDSKEAKKGHELYLIPTAEVTLTNLYNN 267

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
            +    +LP+ +  +   +R E   +     G++R   F + +     T +       ++
Sbjct: 268 EILKEEDLPLMMTAYTPCFRKEAGSAGRDTRGIIRQHQFDKVELVAITTPQDSDIMQERM 327

Query: 408 HNLIISIYKDFGFEKIMVKLSTRPEKRVGSD----ALWDDAENIMKGV 451
                 +    G    +V+L +       S+     +W   +N  + +
Sbjct: 328 VACASDLLTSLGLPHRLVQLCSGDLGFSASNTIDIEVWLPGQNCYREI 375


>gi|56965072|ref|YP_176804.1| histidyl-tRNA synthetase [Bacillus clausii KSM-K16]
 gi|81678761|sp|Q5WCR7|SYH2_BACSK RecName: Full=Histidyl-tRNA synthetase 2; AltName:
           Full=Histidine--tRNA ligase 2; Short=HisRS 2
 gi|56911316|dbj|BAD65843.1| histidyl-tRNA synthetase [Bacillus clausii KSM-K16]
          Length = 425

 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 69/189 (36%), Gaps = 15/189 (7%)

Query: 446 NIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSR 505
             ++  L  +   SQ   N  +  G   + G  +E  L +        G IQ       R
Sbjct: 250 QELEEALRYLNIDSQCTFNPFLARGLEIYTGTVYELFLTE--------GAIQSSVGSGGR 301

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAV 565
           ++        E+  P+      FG    +  + +E      PL    +   V  +     
Sbjct: 302 YDQAISGLTGEEQ-PMPTVGISFGIDVIYTALKMEGRINQKPL----LDYYVIPLQKQKE 356

Query: 566 EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
             A  +A+ L+     ++ +F+N+ +   +   + +KIP +I+ G++E +     ++   
Sbjct: 357 --ALAVASSLRKQGFRVDVEFKNKKLTKALDRANKEKIPFVILIGEEEVASGRYKLKNME 414

Query: 626 STTTQKVSL 634
           +   Q V  
Sbjct: 415 TGAEQHVPF 423


>gi|260911612|ref|ZP_05918197.1| histidine-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295]
 gi|260634318|gb|EEX52423.1| histidine-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295]
          Length = 456

 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 73/196 (37%), Gaps = 16/196 (8%)

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
           ++ +   ++ +++  +  G   + G  FE   KD        G          R++    
Sbjct: 276 IEAVGLKNELQLDLTLARGLNYYTGAIFEVKAKDVAIGSITGGG---------RYDNLT- 325

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP-LWLSPIQAIVTTITSSAVEYAQE 570
                   P +    +    +R   ++  N     P   +   Q +      +  +Y   
Sbjct: 326 ---GIFGMPGLSGVGISFGADRIYDVL--NMLDLYPQNAIQATQVLFINFGEAEADYCLP 380

Query: 571 IANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
           IA+ +++  +S+E       +  ++   + K IP +++ G+ E +   + ++   +   Q
Sbjct: 381 IASQIRAAGISVELYPDCAKMKKQMAYANAKGIPFVVLAGESEINLGKVTLKNMLTGDQQ 440

Query: 631 KVSLLDAIPILTKESL 646
            VS  + I I+T ++ 
Sbjct: 441 LVSTEELIAIITSKNT 456


>gi|242238445|ref|YP_002986626.1| alanyl-tRNA synthetase [Dickeya dadantii Ech703]
 gi|242130502|gb|ACS84804.1| alanyl-tRNA synthetase [Dickeya dadantii Ech703]
          Length = 875

 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/134 (20%), Positives = 54/134 (40%), Gaps = 10/134 (7%)

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGF-YYDFDKEQPFSSDELAQIEKKMQEIIA 131
           + HS  H++  A++ +        G ++ D +  +DF   +    DE+ Q+E  +   + 
Sbjct: 562 LNHSATHLLHAALRQVLGTHVAQKGSLVNDRYLRFDFSHPEAMKPDEIRQVEDIVNAQVR 621

Query: 132 RDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRS 190
           R+ P     ++ + AR          K          + V +   G++  +LC G H R 
Sbjct: 622 RNLPVDTAIMAIDDARAKGAMALFGEKY--------DDQVRVLTMGDFSIELCGGIHARR 673

Query: 191 TGQVKKFFKLMKVA 204
           TG +  F  + +  
Sbjct: 674 TGDIGLFRIVSESG 687


>gi|238852918|ref|ZP_04643319.1| serine--tRNA ligase [Lactobacillus gasseri 202-4]
 gi|238834454|gb|EEQ26690.1| serine--tRNA ligase [Lactobacillus gasseri 202-4]
          Length = 436

 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 77/188 (40%), Gaps = 9/188 (4%)

Query: 272 GWKIFQTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G  + + + ++ +    KD Y E+  P +++    Q +G +  +  +++ +   DD  K 
Sbjct: 170 GALLERAVSNFFLDENTKDGYTEVIPPYLVNDASMQGTGQFPKFTEDVYTIVDNDDPDKP 229

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFT 387
            R   L P      V  F   +   ++LP+ +  F   +R+E   +     GL+R+  F 
Sbjct: 230 -RDLTLIPTAEVPLVNYFRGKILDAKQLPINVTAFSPAFRSEAGSAGRDTRGLIRMHEFR 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +      ++  ++E  K+ +    + +  G    +V LST              +W  
Sbjct: 289 KVEMVKIVDEDSSWDELEKLTHNAEHLLQKLGLPYHVVALSTGDASFTSAKTYDLEVWMP 348

Query: 444 AENIMKGV 451
           A++  + +
Sbjct: 349 AQDKYREI 356


>gi|121536069|ref|ZP_01667851.1| seryl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
 gi|121305351|gb|EAX46311.1| seryl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
          Length = 297

 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 38/213 (17%), Positives = 77/213 (36%), Gaps = 21/213 (9%)

Query: 242 EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEIN 295
           E R H ++   + +          G+   F+   G ++ + LI++M         Y E  
Sbjct: 9   EPRPHWEIGERLGILDFERGGKVTGARFTFYKGAGARLERALINFMLDLHTREHGYTEFF 68

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
            P +++      +G    +  +MF ++  D        + L P        +    +   
Sbjct: 69  PPFIVNADSMVGTGQLPKFAQDMFKLEGLD--------YYLIPTAEVPVTNLHRQEILDA 120

Query: 356 RELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
           ++LP+  A + + +R E   +     GL+R   F + +   F   E+ +NE  K+ N   
Sbjct: 121 KDLPLYYAAYSACFRAEAGAAGRDTRGLIRQHQFNKVELVKFTLPEESYNELEKLTNNAE 180

Query: 413 SIYKDFGFEKIMVKLSTRPEKRV----GSDALW 441
            + +  G    +V L T              +W
Sbjct: 181 RVLQLLGLPYRVVLLCTGDMGFASAKTYDLEVW 213


>gi|220931419|ref|YP_002508327.1| alanyl-tRNA synthetase [Halothermothrix orenii H 168]
 gi|219992729|gb|ACL69332.1| alanyl-tRNA synthetase [Halothermothrix orenii H 168]
          Length = 876

 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/144 (22%), Positives = 61/144 (42%), Gaps = 10/144 (6%)

Query: 56  EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPF 114
           +  +E    E+ R      HS  H++ + ++ +  +     G  +  D   +DF    P 
Sbjct: 544 DQVVEARVDEELRYNIARNHSTTHLLHKTLKEVLGDHVNQSGSLVAPDRLRFDFSHYAPL 603

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
           + +E+ +IE  + E I  + P     +  EKA+E+        K   +        V + 
Sbjct: 604 TEEEINRIEDTVNEKILSNLPVEILEMPFEKAKEMGAVALFGEKYGHI--------VRVV 655

Query: 175 RQGEW-FDLCRGPHVRSTGQVKKF 197
           + G++  +LC G HV  TG++  F
Sbjct: 656 KIGDYSIELCGGTHVDRTGEIGSF 679


>gi|170727677|ref|YP_001761703.1| alanyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
 gi|205830209|sp|B1KPS5|SYA_SHEWM RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|169813024|gb|ACA87608.1| alanyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
          Length = 874

 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 57/143 (39%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFS 115
            ++E I  +  R    + HS  H++  A++ +        G +++ +   +DF   +   
Sbjct: 544 DTLEAIVDKKLRHRTELNHSVTHLLHAALRQLLGTHVTQKGSLVDAERLRFDFSHFEGVK 603

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            +EL  +E  +   I R+       +  ++A+E         K          + V +  
Sbjct: 604 PEELKAVEDLVNTQIRRNHKLSADVMDMDQAKERGAMALFGEKY--------TDEVRVVT 655

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G++  +LC G HV  TG +  F
Sbjct: 656 MGDFSIELCGGTHVGRTGDIGLF 678


>gi|42783532|ref|NP_980779.1| histidyl-tRNA synthetase [Bacillus cereus ATCC 10987]
 gi|206975990|ref|ZP_03236900.1| histidyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217961893|ref|YP_002340463.1| histidyl-tRNA synthetase [Bacillus cereus AH187]
 gi|222097847|ref|YP_002531904.1| histidyl-tRNA synthetase [Bacillus cereus Q1]
 gi|54039678|sp|P62370|SYH2_BACC1 RecName: Full=Histidyl-tRNA synthetase 2; AltName:
           Full=Histidine--tRNA ligase 2; Short=HisRS 2
 gi|42739461|gb|AAS43387.1| histidyl-tRNA synthetase [Bacillus cereus ATCC 10987]
 gi|206745742|gb|EDZ57139.1| histidyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217063931|gb|ACJ78181.1| histidyl-tRNA synthetase [Bacillus cereus AH187]
 gi|221241905|gb|ACM14615.1| histidyl-tRNA synthetase [Bacillus cereus Q1]
          Length = 423

 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 71/413 (17%), Positives = 139/413 (33%), Gaps = 55/413 (13%)

Query: 275 IFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           ++Q +    R   +  +Y+EI TP        +          ++   +      +  R+
Sbjct: 19  LWQYIEGQAREICRRYNYKEIRTPIF---EHTELFLRGVGDTTDIVQKEMYSFQDRGERS 75

Query: 334 FALKPM-NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
             L+P    P   +   + +      P +L   G ++R E   +     R R F Q    
Sbjct: 76  LTLRPEGTAPVVRSYVENKMFGDATQPTKLYYIGQMFRYERPQA----GRYRQFVQFGIE 131

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKI---MVKLSTRPEKRVGSDALWDDAENIMK 449
              + +   +   ++  L +  Y+  G + I   +  L     ++   DAL    E  + 
Sbjct: 132 AIGSNDPAIDA--EVIALAVEFYRGMGLKNIKVVLNSLGDAASRQAHRDALIAHFEPRIG 189

Query: 450 G---------------VLDTIKNSSQDRINT-----GVLLGEGAFYGPK----------- 478
                           +LD  K+ + + + T       L  + A Y  K           
Sbjct: 190 EFCSDCQSRLEKNPLRILDCKKDRNHELMGTAPSITEYLNEDSAVYYEKVQELLTMMDVP 249

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS--------EKCHPVMIHRAVFGS 530
           FE       G D+   T+    +    F A    S          E   P M       S
Sbjct: 250 FEKDPNLVRGLDYYQHTVFEIMSEAEGFGAITTLSGGGRYNGLVQEIGGPEMPGIGFAMS 309

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
           IER I  + +     LP+    I   V  +   A ++A ++A  L+   LS+E D+ +  
Sbjct: 310 IERLIMAL-KAENIELPIE-HSIDCYVVALGEKAKDHAAKVAFDLRKAGLSVEKDYLDRK 367

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  + +     K   + + G+ E  +  I ++   +   ++V+L      + +
Sbjct: 368 MKAQFKSADRLKAKFVAVLGEDELDKGIINLKDMATGEQEEVALDVFASYVAE 420


>gi|198276597|ref|ZP_03209128.1| hypothetical protein BACPLE_02793 [Bacteroides plebeius DSM 17135]
 gi|198270122|gb|EDY94392.1| hypothetical protein BACPLE_02793 [Bacteroides plebeius DSM 17135]
          Length = 424

 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 69/198 (34%), Gaps = 16/198 (8%)

Query: 245 DHRKLAREMDLFHIA----EDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQV 299
            H +LA++ DL          G+G   +  KG ++ + LI++ +       YEEI  P V
Sbjct: 143 PHWELAKKYDLIDFDLGVKITGAGFPVYKGKGARLQRALINFFLDEARAAGYEEIMPPTV 202

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           ++            Y       K       +L    L P        ++   +   ++LP
Sbjct: 203 VNA--------ASGYGTGQLPDKEGQMYHCNLDDLYLIPTAEVPVTNIYRDVILDEKQLP 254

Query: 360 VRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ++   +   +R E       + GL R+  F++ +       E       ++ + +  + K
Sbjct: 255 IKNCAYTQCFRREAGSYGKDVRGLNRLHEFSKVELVRIDKPEHSKQSHQEMLDHVEGLLK 314

Query: 417 DFGFEKIMVKLSTRPEKR 434
                  +++L       
Sbjct: 315 KLELPYRILRLCGGDMSF 332


>gi|152994964|ref|YP_001339799.1| glycyl-tRNA synthetase [Marinomonas sp. MWYL1]
 gi|150835888|gb|ABR69864.1| glycyl-tRNA synthetase [Marinomonas sp. MWYL1]
          Length = 458

 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 49/331 (14%), Positives = 103/331 (31%), Gaps = 16/331 (4%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPS 374
            N+         + +     L+P    G    F + + S  R LP  +A+ G  +RNE +
Sbjct: 123 FNLMFKTNVGPMVNEESYTYLRPETAQGIFTNFKNVVDSTSRTLPFGIAQIGKSFRNEIT 182

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              + + RVR F Q +   FC   +               + D G  +  ++      + 
Sbjct: 183 PR-NFIFRVREFEQMELEFFCKPGEDEKWHEFWVGARKQWWLDQGLAEENIQF-----EY 236

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQ--DRINTGVLLGEGAFYGPKFEYILKDAIGR-DW 491
           V  D L   +++ +  +L    +  +  + +        G+    + E+ L   + + + 
Sbjct: 237 VTGDDLAHYSKSTV-DILYKFPHGFEELEGVANRTDYDLGSHTKAQEEFGLSAKVKKNEH 295

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLS 551
               + +     +++   +    S      ++        E  +              L+
Sbjct: 296 STAKLAIRDLEENKWEVPFCIEPSAGLDRGLLAVMTEAYTEEELPNGTSRTVLKFKPHLA 355

Query: 552 PIQAIVTT---ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIII 608
           PI+  +          V  A+E+ N L+   L          +    R H     PI + 
Sbjct: 356 PIKVAIMPLKKNKPEIVALAKELKNKLQKLGLGRILYENTGNVGKGYRRHDEVGTPICVT 415

Query: 609 CGDK--EASERSIGIRRFGSTTTQKVSLLDA 637
                 E     + +R   +     V   D 
Sbjct: 416 VDFDSIEQEGAPVTVRDRDTMEQIVVPAADL 446


>gi|297529263|ref|YP_003670538.1| histidyl-tRNA synthetase [Geobacillus sp. C56-T3]
 gi|297252515|gb|ADI25961.1| histidyl-tRNA synthetase [Geobacillus sp. C56-T3]
          Length = 426

 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 68/432 (15%), Positives = 126/432 (29%), Gaps = 65/432 (15%)

Query: 265 VIFWHRKGWK--------IFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
           + F   +G +         +Q +    R       Y+EI TP        +         
Sbjct: 1   MAFQIPRGTQDVLPGDTEKWQYVEHIARSLCSRYGYQEIRTPIF---EHTELFLRGVGDT 57

Query: 316 ANMFAVKCADDTIKDLRTFALKPM-NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
            ++   +      K  R   L+P    P   A   H L      P++L   G ++R E  
Sbjct: 58  TDIVQKEMYTFEDKGGRALTLRPEGTAPVVRAFVEHKLYGSPNQPLKLYYSGPMFRYERP 117

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG--------------- 419
            +     R R F Q       + +   +   ++  L + IY+  G               
Sbjct: 118 EA----GRFRQFVQFGVEALGSSDPAIDA--EVMALAMHIYEALGLKRIRLVINSLGDLD 171

Query: 420 -FEKIMVKLSTRPEKRVGS---DALWDDAENIMKGVLDTIKNSSQD------RINTGVLL 469
                   L      R+     D       N ++ +LD  K+   +       I   +  
Sbjct: 172 SRRAHREALVRHFSSRIHELCPDCQTRLHTNPLR-ILDCKKDRDHELMATAPSILDYLNE 230

Query: 470 GEGAFY----------GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS---- 515
              A++          G  F    +   G D+   T     +    F A           
Sbjct: 231 DSRAYFEKVKQYLTNLGIPFVIDSRLVRGLDYYNHTTFEIMSEAEGFGAAATLCGGGRYN 290

Query: 516 ----EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
               E   P         SIER +  +  + +G      S +   V  +   A + A  +
Sbjct: 291 GLVQEIGGPETPGIGFALSIERLLAAL--DAEGVELPVESGLDCYVVAVGERAKDEAVRL 348

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
              L+   L ++ D+    +  +++         + I GD+E   +   ++   S     
Sbjct: 349 VYALRRFGLRVDQDYLGRKLKAQLKAADRLGASFVAIIGDEELERQEAAVKHMASGEQTN 408

Query: 632 VSLLDAIPILTK 643
           V L +    L +
Sbjct: 409 VPLGELAHFLHE 420


>gi|313142486|ref|ZP_07804679.1| seryl-tRNA synthetase synthetase [Helicobacter canadensis MIT
           98-5491]
 gi|313131517|gb|EFR49134.1| seryl-tRNA synthetase synthetase [Helicobacter canadensis MIT
           98-5491]
          Length = 423

 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/228 (14%), Positives = 80/228 (35%), Gaps = 18/228 (7%)

Query: 242 EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINT 296
             ++H +LA +              S    +     K+ + LI+YM     +  + E+ T
Sbjct: 129 TPKEHWELAEQNGWIDFERGVKLAKSRFSVFMGMAAKLERALINYMLDFNTQRGFSEVGT 188

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD------LRTFALKPMNCPGHVAVFNH 350
           P +++  +   +G    +  ++F +   ++   D           L P        ++N+
Sbjct: 189 PVIVNSQILFGTGQLPKFENDLFKISDFEEEELDSKEAKKGHELYLIPTAEVTLTNLYNN 248

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
            +    +LP+ +  +   +R E   +     G++R   F + +     T +       ++
Sbjct: 249 EILKEEDLPLMMTAYTPCFRKEAGSAGRDTRGIIRQHQFDKVELVAITTPQDSDIMQERM 308

Query: 408 HNLIISIYKDFGFEKIMVKLSTRPEKRVGSD----ALWDDAENIMKGV 451
                 +    G    +V+L +       S+     +W   +N  + +
Sbjct: 309 VACASDLLTSLGLPHRLVQLCSGDLGFSASNTIDIEVWLPGQNCYREI 356


>gi|310815943|ref|YP_003963907.1| alanyl-tRNA synthetase [Ketogulonicigenium vulgare Y25]
 gi|308754678|gb|ADO42607.1| alanyl-tRNA synthetase [Ketogulonicigenium vulgare Y25]
          Length = 868

 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/169 (20%), Positives = 73/169 (43%), Gaps = 9/169 (5%)

Query: 45  GKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDG 103
           G V +    V +G++  +     R      HS  H++ EA+++   +     G     D 
Sbjct: 558 GTVREGFVAVGQGAVLTVDAT-RRGQIAANHSATHLVNEALRAALGDHVAQRGSLNAPDR 616

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKAREL------FESKKEAY 157
             +DF   +  S+DE+A+++  +   I +++P   + ++ ++AR+L       E   +  
Sbjct: 617 LRFDFSHNKALSADEIAKVQADVNAYIRQNTPVETRVMTPDEARDLGAQALFGEKYGDEV 676

Query: 158 KVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGA 206
           +V  +  +    N  + +     +LC G HV   G++  F  L   A +
Sbjct: 677 RVVSMGRL-DGSNKGVDKNTYSLELCGGTHVTRLGEIGAFVLLSDSASS 724


>gi|215404284|ref|ZP_03416465.1| glycyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987]
 gi|254551404|ref|ZP_05141851.1| glycyl-tRNA synthetase [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|260201481|ref|ZP_05768972.1| glycyl-tRNA synthetase [Mycobacterium tuberculosis T46]
 gi|260205658|ref|ZP_05773149.1| glycyl-tRNA synthetase [Mycobacterium tuberculosis K85]
 gi|297634959|ref|ZP_06952739.1| glycyl-tRNA synthetase [Mycobacterium tuberculosis KZN 4207]
 gi|306798228|ref|ZP_07436530.1| glycyl-tRNA synthetase glyS [Mycobacterium tuberculosis SUMu006]
 gi|307085034|ref|ZP_07494147.1| glycyl-tRNA synthetase glyS [Mycobacterium tuberculosis SUMu012]
 gi|308370988|ref|ZP_07423467.2| glycyl-tRNA synthetase glyS [Mycobacterium tuberculosis SUMu003]
 gi|308373390|ref|ZP_07432133.2| glycyl-tRNA synthetase glyS [Mycobacterium tuberculosis SUMu005]
 gi|313659285|ref|ZP_07816165.1| glycyl-tRNA synthetase [Mycobacterium tuberculosis KZN V2475]
 gi|308330130|gb|EFP18981.1| glycyl-tRNA synthetase glyS [Mycobacterium tuberculosis SUMu003]
 gi|308337772|gb|EFP26623.1| glycyl-tRNA synthetase glyS [Mycobacterium tuberculosis SUMu005]
 gi|308341453|gb|EFP30304.1| glycyl-tRNA synthetase glyS [Mycobacterium tuberculosis SUMu006]
 gi|308365406|gb|EFP54257.1| glycyl-tRNA synthetase glyS [Mycobacterium tuberculosis SUMu012]
 gi|323719024|gb|EGB28172.1| glycyl-tRNA synthetase glyS [Mycobacterium tuberculosis CDC1551A]
          Length = 459

 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 54/360 (15%), Positives = 111/360 (30%), Gaps = 58/360 (16%)

Query: 307 QSGHWDS-YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAE 364
           + G W      NM           +     L+P    G    F + + +  ++ P  + +
Sbjct: 128 EPGQWTQPREFNMMLKTYLGPIETEEGLHYLRPETAQGIFVNFANVVTTARKKPPFGIGQ 187

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
            G  +RNE +   + + R R F Q +   F              +  +  Y D G  +  
Sbjct: 188 IGKSFRNEITPG-NFIFRTREFEQMEMEFFVEPATAKEWHQYWIDNRLQWYIDLGIRREN 246

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLD-TIKNSSQDRI---NTGVLLGEGAFYGPKFE 480
           ++             LW+  ++ +    D T+    +        G L G          
Sbjct: 247 LR-------------LWEHPKDKLSHYSDRTVDIEYKFGFMGNPWGELEG---------- 283

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI- 539
             + +    D          +L      FY   +  +  P +I     G    F+  +I 
Sbjct: 284 --VANRTDFDLSTHARHSGVDLS-----FYDQINDVRYTPYVIE-PAAGLTRSFMAFLID 335

Query: 540 ---ENFKGNL------------PLWLSPIQAIVTTIT--SSAVEYAQEIANLLKSHHLSI 582
              E+   N                L+P++A V  ++  +     A+++   L+    +I
Sbjct: 336 AYTEDEAPNTKGGMDKRTVLRLDPRLAPVKAAVLPLSRHADLSPKARDLGAELRKC-WNI 394

Query: 583 ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           + D     I  + R       P  +        + ++ +R   + T  +V++      L 
Sbjct: 395 DFDDAGA-IGRRYRRQDEVGTPFCVTVDFDSLQDNAVTVRERDAMTQDRVAMSSVADYLA 453


>gi|83815951|ref|YP_444974.1| histidyl-tRNA synthetase [Salinibacter ruber DSM 13855]
 gi|83757345|gb|ABC45458.1| histidyl-tRNA synthetase [Salinibacter ruber DSM 13855]
          Length = 435

 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 61/421 (14%), Positives = 130/421 (30%), Gaps = 65/421 (15%)

Query: 272 GWKI-----FQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQS--GHWDSYRANMFAVKC 323
           G ++     ++ + + +R  ++  ++EEI TP +    L  +      D  +  MFA + 
Sbjct: 24  GTRVAASAEWRHVEATVRDVMRRHNFEEIRTPVLEPTELVARGVGESTDIVQKEMFAFER 83

Query: 324 ADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRV 383
           +D        + L+P      V  F       R    +L   G  +R E         R 
Sbjct: 84  SD------TQYVLRPEITAPVVRSFLQHHLDQRGGVQKLFYIGPCFRAEQPQK----GRY 133

Query: 384 RGFTQDDAHVFCTKEQMFN-ECLKIHNLIIS---------IYKDFGFEKIMVKLSTRPEK 433
           R F Q    V    +   + E + +   +                G  +   +     + 
Sbjct: 134 RQFHQFGIEVLGADQPRADAETIAVLMAVCEALGLSDLRLRLNTLGTPERREEYVAALQD 193

Query: 434 RV--GSDALWDDAENIMKG----VLDTIKNSSQDR-------INTGVLLGEGAFYGPK-- 478
            +   +D L + +   ++     +LDT     Q         I+         +   K  
Sbjct: 194 YLAPHADELSETSRRRLEQNPLRILDTKVEHEQALLRDAPTLIDFVSDESLAHYDEVKRL 253

Query: 479 -----------------FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
                             +Y  +     +      Q       R++       S+   P 
Sbjct: 254 LGDLGVEYDEDPHLVRGLDYYTETTFELEHPGLGAQSALAGGGRYDRLAEVLGSDDPVPA 313

Query: 522 MIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLS 581
           +        +ER    + +  + + P   +P    +  +   A  +    A  L++  L 
Sbjct: 314 V---GFAAGMERLFLAL-DAAEADRPGADTPD-VFIAALGDEAEAWCFRTAQELRAGGLH 368

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           +  D    ++  +++E + +  P  +I G  E    +  ++   S   + V   D +  L
Sbjct: 369 VAHDLMGRSLKAQMKEANRQNAPYAMIIGGNELEAGAATVKEMESGEQEDVPFDDLVEYL 428

Query: 642 T 642
           T
Sbjct: 429 T 429


>gi|47566592|ref|ZP_00237414.1| histidyl-tRNA synthetase [Bacillus cereus G9241]
 gi|47556622|gb|EAL14954.1| histidyl-tRNA synthetase [Bacillus cereus G9241]
          Length = 423

 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 70/413 (16%), Positives = 139/413 (33%), Gaps = 55/413 (13%)

Query: 275 IFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           ++Q +    R   +  +Y+EI TP        +          ++   +      +  R+
Sbjct: 19  LWQYIEGQAREICRRYNYKEIRTPIF---EHTELFLRGVGDTTDIVQKEMYSFQDRGERS 75

Query: 334 FALKPM-NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
             L+P    P   +   + +      P +L   G ++R E   +     R R F Q    
Sbjct: 76  LTLRPEGTAPVVRSYVENKMFGDATQPTKLYYIGQMFRYERPQA----GRYRQFVQFGIE 131

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKI---MVKLSTRPEKRVGSDALWDDAENIMK 449
              + +   +   ++  L +  Y+  G + I   +  L     ++   DAL    E  + 
Sbjct: 132 AIGSNDPAIDA--EVIALAVEFYRGMGLKNIKVVLNSLGDAASRQAHRDALIAHFEPRIG 189

Query: 450 G---------------VLDTIKNSSQDRINT-----GVLLGEGAFYGPK----------- 478
                           +LD  K+ + + + T       L  + A Y  K           
Sbjct: 190 EFCSDCQSRLEKNPLRILDCKKDRNHELMGTAPSITEYLNEDSAVYYDKVQELLTMMDVP 249

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS--------EKCHPVMIHRAVFGS 530
           FE       G D+   T+    +    F A    S          E   P M       S
Sbjct: 250 FEKDPNLVRGLDYYQHTVFEIMSEAEGFGAITTLSGGGRYNGLVQEIGGPEMPGIGFAMS 309

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
           IER I  + +     LP+    +   V  +   A ++A ++A  L+   LS+E D+ +  
Sbjct: 310 IERLIMAL-KAENIELPIE-HSMDCYVVALGEKAKDHAAKVAFDLRKAGLSVEKDYLDRK 367

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  + +     K   + + G+ E  +  I ++   +   ++V+L      + +
Sbjct: 368 MKAQFKSADRLKAKFVAVLGEDELDKGIINLKDMATGEQEEVALDVFASYVAE 420


>gi|238897262|ref|YP_002922939.1| alanyl-tRNA synthetase [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
 gi|229465017|gb|ACQ66791.1| alanyl-tRNA synthetase [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
          Length = 875

 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 57/133 (42%), Gaps = 10/133 (7%)

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIAR 132
            HS  H++  A++ +  +  V  G  + E    +DF   +  + DE+  +E  + + I +
Sbjct: 563 NHSATHLLHAALRQVLGKHVVQKGSLVNEKCCRFDFSHFKMMTPDEIENVESLVNQQIRQ 622

Query: 133 DSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRST 191
           +     Q +S E A++   +     K E        + V +   G++  +LC G H R T
Sbjct: 623 NHLIETQIMSLEDAKKKGATALFGEKYE--------DQVRVLSMGDFSIELCGGTHARRT 674

Query: 192 GQVKKFFKLMKVA 204
           G +  F    + +
Sbjct: 675 GDIGLFHITSESS 687


>gi|237708975|ref|ZP_04539456.1| LOW QUALITY PROTEIN: seryl-tRNA synthetase [Bacteroides sp.
           9_1_42FAA]
 gi|229457037|gb|EEO62758.1| LOW QUALITY PROTEIN: seryl-tRNA synthetase [Bacteroides sp.
           9_1_42FAA]
          Length = 304

 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 70/198 (35%), Gaps = 16/198 (8%)

Query: 245 DHRKLAREMDLFHIA----EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQV 299
            H +LA++ DL          G+G   +  KG ++ + LI++   + +   YEEI  P V
Sbjct: 23  PHWELAKKYDLIDFDLGVKITGAGFPVYKGKGARLQRALINFFLDEARASGYEEIMPPTV 82

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           ++            Y       K       ++    L P        ++   +   ++LP
Sbjct: 83  VNT--------ASGYGTGQLPDKEGQMYHCEVDDLYLIPTAEVPVTNIYRDVILDEKQLP 134

Query: 360 VRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ++   +   +R E       + GL R+  F++ +       E       ++ + +  + K
Sbjct: 135 IKNCAYTQCFRREAGSYGKDVRGLNRLHEFSKVELVRIDKPEHSKQSHQEMLDHVEGLLK 194

Query: 417 DFGFEKIMVKLSTRPEKR 434
                  +++L       
Sbjct: 195 KLELPYRILRLCGGDMSF 212


>gi|189485045|ref|YP_001955986.1| alanyl-tRNA synthetase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
 gi|205830280|sp|B1GZ43|SYA_UNCTG RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|170287004|dbj|BAG13525.1| alanyl-tRNA synthetase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
          Length = 877

 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/160 (20%), Positives = 64/160 (40%), Gaps = 15/160 (9%)

Query: 53  PVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKE 111
            + +    II  E  R      H+ AH++ +A++  +       G  +  D F +DF   
Sbjct: 540 KINDAVSTIIDIE-RRKQIARHHTAAHLLHKALREAFGGHITQAGSLVARDYFRFDFTHF 598

Query: 112 QPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE------LFESKKEAYKVEILESI 165
                D+L +IEK++  II  +S    + ++  KAR         E   +  +  ++++ 
Sbjct: 599 SALKKDDLIKIEKRVNSIIRLNSEVCIETMAIAKARNAGAMALFGEKYGDEVRTVLIKNE 658

Query: 166 PAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAG 205
               N ++   G       G HV  TG +  F  + + + 
Sbjct: 659 SGDGNYSMELCG-------GTHVSRTGDIGIFKIISESSA 691


>gi|78188671|ref|YP_379009.1| seryl-tRNA synthetase [Chlorobium chlorochromatii CaD3]
 gi|123580121|sp|Q3ASQ9|SYS_CHLCH RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|78170870|gb|ABB27966.1| seryl-tRNA synthetase [Chlorobium chlorochromatii CaD3]
          Length = 426

 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/221 (14%), Positives = 72/221 (32%), Gaps = 21/221 (9%)

Query: 244 RDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEINTP 297
           ++H +L + + +          G+G   +  KG ++ + LI++M     +   Y E+  P
Sbjct: 142 KNHLELGKALRILDFERGAKVSGAGFPVYVGKGARLERALINFMLDMHTEQHGYTEVFPP 201

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            +++Q   + +G W  +   ++ +                P        +    +     
Sbjct: 202 FLVNQESLRGTGQWPKFADQVYYI--------GEDDLYAIPTAEVPLTNLHRGEMVETNA 253

Query: 358 LPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           LP+    + + +R E         G +RV  F + +   F   E  +    +I +   +I
Sbjct: 254 LPISYTAYTACFRREAGSYGKDTRGFLRVHQFNKVEMVKFTRPEDSYTALEEIRHHAQAI 313

Query: 415 YKDFGFEKI----MVKLSTRPEKRVGSDALWDDAENIMKGV 451
            +                +    +     +W  AE      
Sbjct: 314 LEALKIPYRVLLLCSGDISANATKCYDIEVWSPAEEKYLEA 354


>gi|152976821|ref|YP_001376338.1| histidyl-tRNA synthetase [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|189082285|sp|A7GT85|SYH_BACCN RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|152025573|gb|ABS23343.1| histidyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98]
          Length = 423

 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 70/420 (16%), Positives = 141/420 (33%), Gaps = 57/420 (13%)

Query: 269 HRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
                +++Q +    R   +  +Y+EI TP        +          ++   +     
Sbjct: 13  LPGSVELWQYIEGQAREICRRYNYKEIRTPIF---EHTELFLRGVGDTTDIVQKEMYTFQ 69

Query: 328 IKDLRTFALKPM-NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
            +  R+  L+P    P   +   + +      P +L   G ++R E   +     R R F
Sbjct: 70  DRGDRSLTLRPEGTAPVVRSYVENKMFGDATQPTKLYYIGQMFRYERPQA----GRYRQF 125

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG----------------FEKIMVKLSTR 430
            Q       + +   +   ++  L +  Y+  G                 +     L   
Sbjct: 126 VQFGIEAIGSNDPAIDA--EVIALAVEFYRGMGLKNIKVVLNSLGDPASRQAHREALIAH 183

Query: 431 PEKRVG---SDALWDDAENIMKGVLDTIKNSSQDRINTG------VLLGEGAFY------ 475
            + R+G   SD      +N ++ +LD  ++   + +NT       +     A+Y      
Sbjct: 184 FKPRIGEFCSDCQSRLEKNPLR-ILDCKRDRDHELMNTAPSITDYLNEESTAYYEKVQEL 242

Query: 476 ----GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS--------EKCHPVMI 523
               G  FE       G D+   T+    +    F A    S          E   P M 
Sbjct: 243 LTMMGVPFEKDPNLVRGLDYYQHTVFEIMSEAEGFGAITTLSGGGRYNGLVQEIGGPEMP 302

Query: 524 HRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIE 583
                 SIER I  + +     LP+  + I   V  +   A ++A ++A  L+   LS+E
Sbjct: 303 GIGFAMSIERLIMAL-KAENIELPIE-NTIDCYVVALGDKAKDHAAKVAFDLRKSGLSVE 360

Query: 584 TDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            D+ N  +  + +         + + G+ E  +  I ++   +   ++V+L      + +
Sbjct: 361 KDYLNRKMKAQFKSADRLNAKYVAVLGEDELDKGVINLKDMATGEQEEVALDVFASYIAE 420


>gi|257417514|ref|ZP_05594508.1| seryl-tRNA synthetase [Enterococcus faecalis AR01/DG]
 gi|257159342|gb|EEU89302.1| seryl-tRNA synthetase [Enterococcus faecalis ARO1/DG]
          Length = 423

 Score = 65.6 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 37/223 (16%), Positives = 85/223 (38%), Gaps = 21/223 (9%)

Query: 242 EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEIN 295
           E + H ++   + +          GS  +++   G  + + + ++M  +  +   Y E+ 
Sbjct: 136 EPKPHWEIGEALGILDFERGAKVSGSRFLYYKGLGACLERAVYNFMLDQHVNEHGYTEVI 195

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
            P +++      +G +  ++ ++F V  +D T+         P         +N+ +   
Sbjct: 196 PPYLVNSKAMFGTGQFPKFKEDVFQVAESDLTLI--------PTAEVPLTNYYNNEILEA 247

Query: 356 RELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
           +ELP+        +R+E   +     GL+R+  F + +   F   E  + E  K+ N   
Sbjct: 248 QELPIYFTALSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFSDAEHSYEELEKMTNNAG 307

Query: 413 SIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
            I +  G    ++ LST              +W  A+   + +
Sbjct: 308 DILEKLGLPYRVITLSTGDMGFSAAKTYDLEVWIPAQKTYREI 350


>gi|332882901|ref|ZP_08450508.1| serine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str. F0087]
 gi|332679109|gb|EGJ52099.1| serine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str. F0087]
          Length = 429

 Score = 65.6 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 76/214 (35%), Gaps = 20/214 (9%)

Query: 245 DHRKLAREMDLFHIA----EDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQV 299
            H +LA++ +L          G+G   +  KG ++ + LI++ +    K  YEEI  P V
Sbjct: 143 PHWELAKKYNLIDFDLGVKITGAGFPVYRGKGARLQRALINFFLDEARKSGYEEIMPPTV 202

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           +++           Y       K       +L  F L P        ++   +   ++LP
Sbjct: 203 VNE--------ASGYGTGQLPDKEGQMYHCNLDDFYLIPTAEVPVTNIYRDVILDEKDLP 254

Query: 360 VRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           V+   +   +R E       + GL R+  F++ +       E       ++   +  + +
Sbjct: 255 VKNCAYTQCFRREAGSYGKDVRGLNRLHEFSKVELVRIDKPEHSEQSHQEMLAHVEGLLQ 314

Query: 417 DFGFEKIMVKLSTRPEKRV----GSDALWDDAEN 446
                  +++L                ++ +A+ 
Sbjct: 315 KLELPYRILRLCGGDMSFTSSICYDFEVYSEAQK 348


>gi|327471768|gb|EGF17209.1| histidine--tRNA ligase [Streptococcus sanguinis SK408]
          Length = 426

 Score = 65.6 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 66/418 (15%), Positives = 135/418 (32%), Gaps = 68/418 (16%)

Query: 269 HRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
             +    +Q +  + R+  K  +Y EI TP       ++          ++   +  D  
Sbjct: 13  LPQESAKWQYVEDFARKTFKKYNYGEIRTPIF---EHYEVISRSVGDTTDIVTKEMYDFY 69

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKS-----YRELPVRLAEFGSVYRNEPSGSLHGLMR 382
            K  R   L+P    G   V    +++       + PV++   GS++R E   +     R
Sbjct: 70  DKGDRHITLRP---EGTAPVVRSYVENKLFAPEVQKPVKVYYMGSMFRYERPQA----GR 122

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK------LSTRPEKRVG 436
           +R F Q  A  F +        +++  +    +KD G   + ++        +R   R  
Sbjct: 123 LREFHQIGAECFGSSNPA--TDVEMIAMAAQFFKDIGITNVSLELNSLGNPESRAAYRQA 180

Query: 437 ------------SDALWDDAENIMKGVLDTIKNSSQDRIN-----TGVLLGEGAFYGPKF 479
                       S       E     VLD+ +   +  +         L  E + Y    
Sbjct: 181 LIDYLTPLKASLSADSQRRLEENPLRVLDSKEPEDKAAVEGAPSILDYLDAESSTYFATV 240

Query: 480 EYILKD-----------AIGRDWQCGTI----------QVDFNLPSRFNAFYVNSHSEKC 518
             +L+              G D+   TI          Q+      R++         + 
Sbjct: 241 RSMLETLQIPYVINTNMVRGLDYYNHTIFEFTTEVAGSQLTICAGGRYDGLVAYFGGPET 300

Query: 519 HPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSH 578
             V     +    ER + ++  + +G      + +   V  + +SA   A E+   L++ 
Sbjct: 301 PGVGFGMGL----ERLLLVL--DKQGVELPIETALDVYVAVLGASANGRALELVQALRAQ 354

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
             + E D+ +  +  + +     K   +I  G+ E     + ++   +     VSL  
Sbjct: 355 GFAAERDYLDRKLKAQFKSADNFKAKTLITLGESEVESGRVTVKNNHNREEITVSLDQ 412


>gi|323492975|ref|ZP_08098113.1| alanyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
 gi|323312806|gb|EGA65932.1| alanyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
          Length = 860

 Score = 65.6 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 59/143 (41%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFS 115
             +E +   + R+   + HS  H++  A++++  E     G +++     +DF   +  +
Sbjct: 545 DEVEAVVDAERRASISLNHSATHLLHAALRTVLGEHVTQKGSLVKPENLRFDFSHLEAVT 604

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
             EL ++E+ +   + R+       +  E A++         K          + V +  
Sbjct: 605 PAELKEVERLVNAQVRRNHVIETNVMDIESAKQKGAMALFGEKY--------DDEVRVLS 656

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            GE+  +LC G H  +TG +  F
Sbjct: 657 MGEFSTELCGGIHASNTGDIGLF 679


>gi|161503911|ref|YP_001571023.1| seryl-tRNA synthetase [Salmonella enterica subsp. arizonae serovar
           62:z4,z23:-- str. RSK2980]
 gi|189083583|sp|A9MHZ1|SYS_SALAR RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|160865258|gb|ABX21881.1| hypothetical protein SARI_02001 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 430

 Score = 65.6 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 63/188 (33%), Gaps = 10/188 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M     +   Y E   P +++      +G    +  ++F  +  ++   D
Sbjct: 170 ARMHRALSQFMLDLHTEQHGYSENYVPYLVNHDTLYGTGQLPKFAGDLFHTRPLEEEA-D 228

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
              +AL P        +    +    +LP+++      +R+E         GL+R+  F 
Sbjct: 229 SSNYALIPTAEVPLTNLVRDEIIDEDQLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFD 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E       ++      + +  G     + L T              +W  
Sbjct: 289 KVEMVQIVRPEDSMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMGFGACKTYDLEVWVP 348

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 349 AQNTYREI 356


>gi|323699014|ref|ZP_08110926.1| alanyl-tRNA synthetase [Desulfovibrio sp. ND132]
 gi|323458946|gb|EGB14811.1| alanyl-tRNA synthetase [Desulfovibrio desulfuricans ND132]
          Length = 879

 Score = 65.6 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 38/186 (20%), Positives = 71/186 (38%), Gaps = 27/186 (14%)

Query: 38  AVAVAINGK--VCDLSDP---------------VREGSIEIITPEDPRSLAVIR-HSCAH 79
           A+A   NGK  V D   P               ++ G    +  +  + LA +R H+  H
Sbjct: 515 AIAAR-NGKADVLDTVKPSKNLTAHKIVVSEGVLKPGDAAFLNVDRSQRLATMRNHTSTH 573

Query: 80  IMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLK 138
           ++  A+Q +  +     G ++  D   +DF   +  S +E+A++EK + + I    P  +
Sbjct: 574 LLHAALQKVLGDHAKQAGSLVGPDRLRFDFTHIKGLSPEEIAEVEKLVNQAIFEAIPVTR 633

Query: 139 QYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFF 198
           + +S E A+    +     K              +   G   + C G H+ +TG    F 
Sbjct: 634 EVMSIEAAQAKGATALFGEKY-------GDTVSVIEVPGVSMEFCGGTHLDNTGIAGSFV 686

Query: 199 KLMKVA 204
              +  
Sbjct: 687 ITSESG 692


>gi|284040464|ref|YP_003390394.1| seryl-tRNA synthetase [Spirosoma linguale DSM 74]
 gi|283819757|gb|ADB41595.1| seryl-tRNA synthetase [Spirosoma linguale DSM 74]
          Length = 423

 Score = 65.6 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/232 (13%), Positives = 75/232 (32%), Gaps = 20/232 (8%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIA----EDGSGVIFWHRKGWKIFQTLISY 282
            +  L            + H +L ++ D+          G+G   +  KG +I + +I++
Sbjct: 125 NEVVLEHGDKPTLHEAAQPHWELIKKYDIIDFELGVKIAGAGFPVYKGKGARIQRAMINF 184

Query: 283 -MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
            +   +K  Y E+  P ++++           +       K             L P   
Sbjct: 185 FLDEALKAGYVEVQPPILVNEDS--------GFGTGQLPDKEGQMYFATEDKLYLIPTAE 236

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG---SLHGLMRVRGFTQDDAHVFCTKE 398
                ++   + +  +LPV+   +   +R E       + GL R+  F + +       E
Sbjct: 237 VPITNIYRDVILNENQLPVKNVGYTPCFRREAGSWGAHVRGLNRLHQFDKVEIVRIERPE 296

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAEN 446
             +    ++   + S+ +       +++L                +W  A+ 
Sbjct: 297 NSYAALEEMSLHVQSLLQKLELPYRVLRLCGGDMGFTSALTYDMEVWSAAQQ 348


>gi|221195108|ref|ZP_03568164.1| seryl-tRNA synthetase [Atopobium rimae ATCC 49626]
 gi|221185011|gb|EEE17402.1| seryl-tRNA synthetase [Atopobium rimae ATCC 49626]
          Length = 427

 Score = 65.6 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 39/245 (15%), Positives = 82/245 (33%), Gaps = 22/245 (8%)

Query: 220 IYGTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE--DGSGVIFWH--RKGWK 274
            YG   +   E+ ++    E   E + H  L  ++ +         +G  F+     G +
Sbjct: 115 PYGVDDSDNPEVRRWGTPTEFDFEPKAHWDLGVDLGIIDFDRGVKLAGTRFYLLGGLGAR 174

Query: 275 IFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           + + LI++M  +  K  ++E   P + +      +G    +  +++ V+           
Sbjct: 175 MERALINFMIDQHNKAGFKEFWPPVITNHDSLFGTGQLPKFEDDLYHVQP---------D 225

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDD 390
             L P        +    +    +LP+    F   +R E   +     G++RV  F + +
Sbjct: 226 LYLIPTAEVQLTNIHRGEILDADQLPLLYTAFTPCFREEAGSAGRDTRGIIRVHEFDKVE 285

Query: 391 AHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAEN 446
              F   E   N+   +      I +       +V L T              +W  + N
Sbjct: 286 MVKFSKPEDSMNQLESMVTEAEKILQLLKLPYHVVTLCTGDLGFSAAKCYDIEVWLPSYN 345

Query: 447 IMKGV 451
             K +
Sbjct: 346 NYKEI 350


>gi|328945234|gb|EGG39388.1| histidine--tRNA ligase [Streptococcus sanguinis SK1087]
          Length = 426

 Score = 65.6 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 63/418 (15%), Positives = 136/418 (32%), Gaps = 68/418 (16%)

Query: 269 HRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
             +    +Q +  + R+  +  +Y EI TP       ++          ++   +  D  
Sbjct: 13  LPQESAKWQYVEDFARKTFRKYNYGEIRTPIF---EHYEVISRSVGDTTDIVTKEMYDFY 69

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKS-----YRELPVRLAEFGSVYRNEPSGSLHGLMR 382
            K  R   L+P    G   V    +++       + PV++   GS++R E   +     R
Sbjct: 70  DKGDRHITLRP---EGTAPVVRSYVENKLFAPEVQKPVKVYYMGSMFRYERPQA----GR 122

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD------------FGFEKIMVKLSTR 430
           +R F Q  A  F +        +++  +    +KD             G  +        
Sbjct: 123 LREFHQIGAECFGSSNPA--TDVEMIAMAAQFFKDIGITNVSLELNSLGNPESRAAYRQA 180

Query: 431 PEKRVG--SDALWDDAENIMKG----VLDTIKNSSQDRIN-----TGVLLGEGAFYGPKF 479
               +     +L  D++  ++     VLD+ +   +  +         L  E + Y    
Sbjct: 181 LIDYLTPLKPSLSADSQRRLEENPLRVLDSKEPEDKAAVEGAPSILDYLDEESSTYFAAV 240

Query: 480 EYILKD-----------AIGRDWQCGTI----------QVDFNLPSRFNAFYVNSHSEKC 518
             +L+              G D+   TI          Q+      R++         + 
Sbjct: 241 RSMLETLQIPYVINTNMVRGLDYYNHTIFEFTTEVAGSQLTICAGGRYDGLVAYFGGPET 300

Query: 519 HPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSH 578
             V     +    ER + ++  + +G      + +   V  + + A   A E+   L++ 
Sbjct: 301 PGVGFGMGL----ERLLLVL--DKQGVELPIETALDVYVAVLGTGANGRALELVQALRAQ 354

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
             + E D+ +  +  + +   I K   +I  G+ E     + ++   +     VSL  
Sbjct: 355 GFAAERDYLDRKLKAQFKSADIFKAKTLITLGESEVESGQVTVKNNYNREEITVSLDQ 412


>gi|325695668|gb|EGD37567.1| histidine--tRNA ligase [Streptococcus sanguinis SK150]
          Length = 426

 Score = 65.6 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 64/418 (15%), Positives = 131/418 (31%), Gaps = 68/418 (16%)

Query: 269 HRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
             +    +Q +  + R+  +  +Y EI TP       ++          ++   +  D  
Sbjct: 13  LPQESAKWQYVEDFARKTFRKYNYGEIRTPIF---EHYEVISRSVGDTTDIVTKEMYDFY 69

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKS-----YRELPVRLAEFGSVYRNEPSGSLHGLMR 382
            K  R   L+P    G   V    +++       + PV++   GS++R E   +     R
Sbjct: 70  DKGDRHITLRP---EGTAPVVRSYVENKLFAPEVQKPVKVYYMGSMFRYERPQA----GR 122

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD------------FGFEKIMVKLSTR 430
           +R F Q  A  F +        +++  +    +KD             G  +        
Sbjct: 123 LREFHQIGAECFGSSNPA--TDVEMIAMAAQFFKDIGITNVSLELNSLGNPESRAAYRQA 180

Query: 431 PEKRVG------SDALWDDAENIMKGVLDTIKNSSQDRIN-----TGVLLGEGAFYGPKF 479
               +       S       E     VLD+ +   +  +         L  E   Y    
Sbjct: 181 LIDYLTPLKASLSADSQRRLEENPLRVLDSKEPEDKVAVEGAPSILDYLDEESCAYFAAV 240

Query: 480 EYILKD-----------AIGRDWQCGTI----------QVDFNLPSRFNAFYVNSHSEKC 518
             +L+              G D+   TI          Q+      R++         + 
Sbjct: 241 RSMLETLQIPYVINTNMVRGLDYYNHTIFEFTTEVAGSQLTICAGGRYDGLVAYFGGPET 300

Query: 519 HPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSH 578
             V     +    ER + ++  + +G      + +   V  + +SA   A E+   L++ 
Sbjct: 301 PGVGFGMGL----ERLLLVL--DKQGVELPIETALDVYVAVLGASANGRALELVQALRAQ 354

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
             + E D+ +  +  + +   I K   +I  G+ E     + ++   +     VSL  
Sbjct: 355 GFAAERDYLDRKLKAQFKSADIFKAKTLITLGESEVESGQVTVKNNHNREEITVSLDQ 412


>gi|307545960|ref|YP_003898439.1| seryl-tRNA synthetase [Halomonas elongata DSM 2581]
 gi|307217984|emb|CBV43254.1| seryl-tRNA synthetase [Halomonas elongata DSM 2581]
          Length = 442

 Score = 65.6 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 48/351 (13%), Positives = 116/351 (33%), Gaps = 44/351 (12%)

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYK------VEILESIPAKEN 170
           + LA +E + +E+ A       +  +  K+    ++  E  +       ++ + + A + 
Sbjct: 44  ERLAALESRRRELQAETERLQNERNTRSKSIGKAKANGEDIQPLLDEVSDLGDRLDAAKT 103

Query: 171 VTLYRQGEWFDLCRG-PHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQ 229
                Q EW +   G P++      +   +   V    W             GT      
Sbjct: 104 RLAEVQAEWDEQVSGLPNLPHESVPEGQSEDDNVELHRW-------------GTPRTFDF 150

Query: 230 ELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK--I 287
           E+  ++    ++ + D    ++          G+          ++ + L  +M  K  +
Sbjct: 151 EIRDHVDLGAQTGQLDFDLASKLTGARFAVMRGTI--------ARLHRALTQFMLDKQTL 202

Query: 288 KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
           +  YEE   P +++      +G    +  ++F ++       D R + L P         
Sbjct: 203 EHGYEECYVPYMVNDDSLYGTGQLPKFGEDLFRLE-------DERGYRLIPTAEVPLTNF 255

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
               +  ++ LPVRL      +R+E         G++R   F + +          ++  
Sbjct: 256 ARDEIIEHKALPVRLTAHTPCFRSEAGSHGRDTRGMIRQHQFDKVEMVQLVEPSTSYDTL 315

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPE----KRVGSDALWDDAENIMKGV 451
            ++     +I +       +V L T        +     +W  ++   + +
Sbjct: 316 EEMRGHAEAILQALDLPYRVVTLCTGDMGAGAAKTYDLEVWLPSQETYREI 366


>gi|332358852|gb|EGJ36674.1| histidine--tRNA ligase [Streptococcus sanguinis SK1056]
          Length = 426

 Score = 65.6 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 58/418 (13%), Positives = 128/418 (30%), Gaps = 68/418 (16%)

Query: 269 HRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
             +    +Q +  + R+  +  +Y EI TP       ++          ++   +  D  
Sbjct: 13  LPQESAKWQYVEDFARKTFRKYNYGEIRTPIF---EHYEVISRSVGDTTDIVTKEMYDFY 69

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKS-----YRELPVRLAEFGSVYRNEPSGSLHGLMR 382
            K  R   L+P    G   V    +++       + PV++   GS++R E   +     R
Sbjct: 70  DKGDRHITLRP---EGTAPVVRSYVENKLFAPEVQKPVKVYYMGSMFRYERPQA----GR 122

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK------LSTRPEKRVG 436
           +R F Q  A  F +        +++  +    +KD G   + ++        +R   R  
Sbjct: 123 LREFHQIGAECFGSSNPA--TDVEMIAMAAQFFKDIGITNVSLELNSLGNPESRAAYRQA 180

Query: 437 ------------SDALWDDAENIMKGVLDTIKNSSQDRIN------TGVLLGEGAFYGP- 477
                       S       E     VLD+ +   +  +         +     A++   
Sbjct: 181 LIDYLTPLKPSLSADSQRRLEENPLRVLDSKEPEDKAAVEGAPSILDYLDEESSAYFAAV 240

Query: 478 -------------------KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC 518
                                +Y          +    Q+      R++         + 
Sbjct: 241 RSMLEILQIPYVINTNMVRGLDYYNHTIFEFTTEVAGSQLTICAGGRYDGLVAYFGGPET 300

Query: 519 HPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSH 578
             V     +    ER + ++  + +G      + +   V  +   A   A E+   L++ 
Sbjct: 301 PGVGFGMGL----ERLLLVL--DKQGVELPIETALDVYVAVLGPGANGRALELVQALRTQ 354

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
             + E D+ +  +  + +     K   +I  G+ E     + ++   +     VSL  
Sbjct: 355 GFAAERDYLDRKLKAQFKSADSFKAKTLITLGESEVESGQVTVKNNHNREEITVSLDQ 412


>gi|325109123|ref|YP_004270191.1| alanyl-tRNA synthetase [Planctomyces brasiliensis DSM 5305]
 gi|324969391|gb|ADY60169.1| alanyl-tRNA synthetase [Planctomyces brasiliensis DSM 5305]
          Length = 869

 Score = 65.6 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 41/162 (25%), Positives = 69/162 (42%), Gaps = 16/162 (9%)

Query: 44  NGKVCDLSDPVREGSIEI---ITPE-DPRSLAVIR--HSCAHIMAEAVQSIWPEVQVAIG 97
           +G +      +++G +E+   +T E D      IR  HS  H+M  A++    E     G
Sbjct: 519 DGDLWLHIGHLKQGKLEVGQTLTAEVDGERRDAIRRAHSATHLMHHALRETLGENATQRG 578

Query: 98  P-IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEA 156
             + +D   +DF  ++P S +EL +IE  +   IA  +      +  E AR         
Sbjct: 579 SKVQQDELRFDFAHKKPVSPEELRRIEDMVNSHIANGNDVATDLMKIEDARAKGAMALFG 638

Query: 157 YKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
            K          + V +   G++  +LC G H+ +TGQV  F
Sbjct: 639 EKY--------PDLVRVVSMGDYSIELCGGTHLSNTGQVGVF 672


>gi|239832092|ref|ZP_04680421.1| alanyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301]
 gi|239824359|gb|EEQ95927.1| alanyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301]
          Length = 885

 Score = 65.6 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/140 (24%), Positives = 64/140 (45%), Gaps = 4/140 (2%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFS 115
            ++E+      R+     HS  H++ EA++          G  +  D   +DF   +P S
Sbjct: 546 DAVELKVDSARRTRIRSNHSATHLLHEALRETLGSHVAQKGSLVAPDRLRFDFSHPKPIS 605

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKAREL--FESKKEAYKVEI-LESIPAKENVT 172
           ++ELA++E    EII +++P   + ++ + A          E Y  E+ + S+   ++ +
Sbjct: 606 AEELAKVENLANEIILQNAPVSTRLMAVDDAIAEGAMALFGEKYGDEVRVVSMGTAKHGS 665

Query: 173 LYRQGEWFDLCRGPHVRSTG 192
              +    +LC G HVR TG
Sbjct: 666 KEGKAYSVELCGGTHVRQTG 685


>gi|159903816|ref|YP_001551160.1| seryl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
 gi|159888992|gb|ABX09206.1| Seryl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
          Length = 442

 Score = 65.6 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 81/242 (33%), Gaps = 20/242 (8%)

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED----GSGVIFWHRKGWKIFQ 277
           G       E+  +   LE    ++H ++A E+ L           S  +    +G ++ +
Sbjct: 134 GKNETDNVEVRSWGEPLESKAYKEHWEIAEELQLLDTQRSVKIAKSRFVTLLNQGARLER 193

Query: 278 TLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFAL 336
            LI++M     K  Y E+  P +++      SG    +    F     D          L
Sbjct: 194 ALINFMLDMHSKKGYLEVLPPVLVNTASLTASGQLPKFSEESFRCAEDD--------LWL 245

Query: 337 KPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHV 393
            P       ++    +    ELP++   +   +R E         GL+R+  F + +   
Sbjct: 246 TPTAEVPLTSLHRGEIIPSEELPIKYVAYTPCFRREAGSYGRDTRGLIRLHQFNKVELFW 305

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP----EKRVGSDALWDDAENIMK 449
           F   E+      +I     SI +       +++L T        R     +W    N  +
Sbjct: 306 FVHPEKSPAAHEQITKDAESILQALELPYRVLELCTGDLGFSASRTYDLEVWLPGANAYR 365

Query: 450 GV 451
            +
Sbjct: 366 EI 367


>gi|322514581|ref|ZP_08067614.1| serine--tRNA ligase [Actinobacillus ureae ATCC 25976]
 gi|322119520|gb|EFX91607.1| serine--tRNA ligase [Actinobacillus ureae ATCC 25976]
          Length = 435

 Score = 65.6 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 63/190 (33%), Gaps = 11/190 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK--CADDTI 328
            ++ + L  +M     +   Y E N P +++      +G    +  ++F  +     D  
Sbjct: 171 ARLHRALSQFMLDLHTEQHGYVETNVPFLVNHDTLFGTGQLPKFGEDLFHTQPLTGQDPN 230

Query: 329 KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRG 385
           +  R F+L P        +    +     LP+R       +R+E         GL+R+  
Sbjct: 231 ETQRPFSLIPTAEVPVTNLVRDEIIDEDTLPLRCTAHTPCFRSEAGSYGRDTRGLIRMHQ 290

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALW 441
           F + +       E+      ++      + +  G     V L T              +W
Sbjct: 291 FEKVEMVQIVAPEKSMEALEELTGHAEKVLQLLGLPYRKVLLCTGDMGFGSAKTYDLEVW 350

Query: 442 DDAENIMKGV 451
             A+N  + +
Sbjct: 351 LPAQNTYREI 360


>gi|85058516|ref|YP_454218.1| alanyl-tRNA synthetase [Sodalis glossinidius str. 'morsitans']
 gi|123520018|sp|Q2NVL2|SYA_SODGM RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|84779036|dbj|BAE73813.1| alanyl-tRNA synthase [Sodalis glossinidius str. 'morsitans']
          Length = 875

 Score = 65.6 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 58/143 (40%), Gaps = 11/143 (7%)

Query: 65  EDPRSLAV-IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGF-YYDFDKEQPFSSDELAQI 122
           +  R   + + HS  H++  A++ +  +     G ++ D +  +DF   +    +++ ++
Sbjct: 553 DSARRERIRLNHSATHLLHAALRQVLGDHVGQKGSLVNDHYLRFDFSHNEAMKPEQIRRV 612

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FD 181
           E+ + E I  + P     ++ E AR          K E          V +   G++  +
Sbjct: 613 EEIVNEQIRCNLPIQTDIMALEDARNKGAMALFGEKYE--------AQVRVLSMGDFSTE 664

Query: 182 LCRGPHVRSTGQVKKFFKLMKVA 204
           LC G H   TG +  F  + +  
Sbjct: 665 LCGGTHASRTGDIGLFRIIAESG 687


>gi|15609494|ref|NP_216873.1| glycyl-tRNA synthetase [Mycobacterium tuberculosis H37Rv]
 gi|15841869|ref|NP_336906.1| glycyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551]
 gi|31793534|ref|NP_856027.1| glycyl-tRNA synthetase [Mycobacterium bovis AF2122/97]
 gi|121638236|ref|YP_978460.1| glycyl-tRNA synthetase [Mycobacterium bovis BCG str. Pasteur
           1173P2]
 gi|148662189|ref|YP_001283712.1| glycyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|148823560|ref|YP_001288314.1| glycyl-tRNA synthetase [Mycobacterium tuberculosis F11]
 gi|167968764|ref|ZP_02551041.1| glycyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|215412102|ref|ZP_03420866.1| glycyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A]
 gi|215427732|ref|ZP_03425651.1| glycyl-tRNA synthetase [Mycobacterium tuberculosis T92]
 gi|215431296|ref|ZP_03429215.1| glycyl-tRNA synthetase [Mycobacterium tuberculosis EAS054]
 gi|218754085|ref|ZP_03532881.1| glycyl-tRNA synthetase [Mycobacterium tuberculosis GM 1503]
 gi|219558346|ref|ZP_03537422.1| glycyl-tRNA synthetase [Mycobacterium tuberculosis T17]
 gi|224990730|ref|YP_002645417.1| glycyl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253798565|ref|YP_003031566.1| glycyl-tRNA synthetase glyS [Mycobacterium tuberculosis KZN 1435]
 gi|254232499|ref|ZP_04925826.1| glycyl-tRNA synthetase glyS [Mycobacterium tuberculosis C]
 gi|254365134|ref|ZP_04981180.1| glycyl-tRNA synthetase glyS [Mycobacterium tuberculosis str.
           Haarlem]
 gi|260187360|ref|ZP_05764834.1| glycyl-tRNA synthetase [Mycobacterium tuberculosis CPHL_A]
 gi|289443878|ref|ZP_06433622.1| glycyl-tRNA synthetase [Mycobacterium tuberculosis T46]
 gi|289447999|ref|ZP_06437743.1| glycyl-tRNA synthetase glyS [Mycobacterium tuberculosis CPHL_A]
 gi|289553853|ref|ZP_06443063.1| glycyl-tRNA synthetase glyS [Mycobacterium tuberculosis KZN 605]
 gi|289570499|ref|ZP_06450726.1| glycyl-tRNA synthetase glyS [Mycobacterium tuberculosis T17]
 gi|289575051|ref|ZP_06455278.1| glycyl-tRNA synthetase glyS [Mycobacterium tuberculosis K85]
 gi|289746135|ref|ZP_06505513.1| glycyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987]
 gi|289750956|ref|ZP_06510334.1| glycyl-tRNA synthetase glyS [Mycobacterium tuberculosis T92]
 gi|289754462|ref|ZP_06513840.1| glycyl-tRNA synthetase [Mycobacterium tuberculosis EAS054]
 gi|289762523|ref|ZP_06521901.1| glycyl-tRNA synthetase glyS [Mycobacterium tuberculosis GM 1503]
 gi|294994539|ref|ZP_06800230.1| glycyl-tRNA synthetase [Mycobacterium tuberculosis 210]
 gi|297731950|ref|ZP_06961068.1| glycyl-tRNA synthetase [Mycobacterium tuberculosis KZN R506]
 gi|298525839|ref|ZP_07013248.1| glycyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A]
 gi|306780395|ref|ZP_07418732.1| glycyl-tRNA synthetase glyS [Mycobacterium tuberculosis SUMu002]
 gi|306808676|ref|ZP_07445344.1| glycyl-tRNA synthetase glyS [Mycobacterium tuberculosis SUMu007]
 gi|306968505|ref|ZP_07481166.1| glycyl-tRNA synthetase glyS [Mycobacterium tuberculosis SUMu009]
 gi|306972734|ref|ZP_07485395.1| glycyl-tRNA synthetase glyS [Mycobacterium tuberculosis SUMu010]
 gi|308232112|ref|ZP_07414959.2| glycyl-tRNA synthetase glyS [Mycobacterium tuberculosis SUMu001]
 gi|308372212|ref|ZP_07427828.2| glycyl-tRNA synthetase glyS [Mycobacterium tuberculosis SUMu004]
 gi|308380344|ref|ZP_07489609.2| glycyl-tRNA synthetase glyS [Mycobacterium tuberculosis SUMu011]
 gi|54039669|sp|P67033|SYG_MYCBO RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|54042029|sp|P67032|SYG_MYCTU RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|2078043|emb|CAB08466.1| PROBABLE GLYCYL-tRNA SYNTHETASE GLYS (GLYCINE--tRNA LIGASE) (GLYRS)
           [Mycobacterium tuberculosis H37Rv]
 gi|13882135|gb|AAK46720.1| glycyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551]
 gi|31619127|emb|CAD97239.1| PROBABLE GLYCYL-tRNA SYNTHETASE GLYS (GLYCINE--tRNA LIGASE) (GLYRS)
           [Mycobacterium bovis AF2122/97]
 gi|121493884|emb|CAL72359.1| Probable glycyl-tRNA synthetase glyS [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|124601558|gb|EAY60568.1| glycyl-tRNA synthetase glyS [Mycobacterium tuberculosis C]
 gi|134150648|gb|EBA42693.1| glycyl-tRNA synthetase glyS [Mycobacterium tuberculosis str.
           Haarlem]
 gi|148506341|gb|ABQ74150.1| glycyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|148722087|gb|ABR06712.1| glycyl-tRNA synthetase glyS [Mycobacterium tuberculosis F11]
 gi|224773843|dbj|BAH26649.1| glycyl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253320068|gb|ACT24671.1| glycyl-tRNA synthetase glyS [Mycobacterium tuberculosis KZN 1435]
 gi|289416797|gb|EFD14037.1| glycyl-tRNA synthetase [Mycobacterium tuberculosis T46]
 gi|289420957|gb|EFD18158.1| glycyl-tRNA synthetase glyS [Mycobacterium tuberculosis CPHL_A]
 gi|289438485|gb|EFD20978.1| glycyl-tRNA synthetase glyS [Mycobacterium tuberculosis KZN 605]
 gi|289539482|gb|EFD44060.1| glycyl-tRNA synthetase glyS [Mycobacterium tuberculosis K85]
 gi|289544253|gb|EFD47901.1| glycyl-tRNA synthetase glyS [Mycobacterium tuberculosis T17]
 gi|289686663|gb|EFD54151.1| glycyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987]
 gi|289691543|gb|EFD58972.1| glycyl-tRNA synthetase glyS [Mycobacterium tuberculosis T92]
 gi|289695049|gb|EFD62478.1| glycyl-tRNA synthetase [Mycobacterium tuberculosis EAS054]
 gi|289710029|gb|EFD74045.1| glycyl-tRNA synthetase glyS [Mycobacterium tuberculosis GM 1503]
 gi|298495633|gb|EFI30927.1| glycyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A]
 gi|308214941|gb|EFO74340.1| glycyl-tRNA synthetase glyS [Mycobacterium tuberculosis SUMu001]
 gi|308326717|gb|EFP15568.1| glycyl-tRNA synthetase glyS [Mycobacterium tuberculosis SUMu002]
 gi|308333991|gb|EFP22842.1| glycyl-tRNA synthetase glyS [Mycobacterium tuberculosis SUMu004]
 gi|308344939|gb|EFP33790.1| glycyl-tRNA synthetase glyS [Mycobacterium tuberculosis SUMu007]
 gi|308353870|gb|EFP42721.1| glycyl-tRNA synthetase glyS [Mycobacterium tuberculosis SUMu009]
 gi|308357815|gb|EFP46666.1| glycyl-tRNA synthetase glyS [Mycobacterium tuberculosis SUMu010]
 gi|308361761|gb|EFP50612.1| glycyl-tRNA synthetase glyS [Mycobacterium tuberculosis SUMu011]
 gi|326903973|gb|EGE50906.1| glycyl-tRNA synthetase glyS [Mycobacterium tuberculosis W-148]
 gi|328458333|gb|AEB03756.1| glycyl-tRNA synthetase glyS [Mycobacterium tuberculosis KZN 4207]
          Length = 463

 Score = 65.6 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 54/360 (15%), Positives = 111/360 (30%), Gaps = 58/360 (16%)

Query: 307 QSGHWDS-YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAE 364
           + G W      NM           +     L+P    G    F + + +  ++ P  + +
Sbjct: 132 EPGQWTQPREFNMMLKTYLGPIETEEGLHYLRPETAQGIFVNFANVVTTARKKPPFGIGQ 191

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
            G  +RNE +   + + R R F Q +   F              +  +  Y D G  +  
Sbjct: 192 IGKSFRNEITPG-NFIFRTREFEQMEMEFFVEPATAKEWHQYWIDNRLQWYIDLGIRREN 250

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLD-TIKNSSQDRI---NTGVLLGEGAFYGPKFE 480
           ++             LW+  ++ +    D T+    +        G L G          
Sbjct: 251 LR-------------LWEHPKDKLSHYSDRTVDIEYKFGFMGNPWGELEG---------- 287

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI- 539
             + +    D          +L      FY   +  +  P +I     G    F+  +I 
Sbjct: 288 --VANRTDFDLSTHARHSGVDLS-----FYDQINDVRYTPYVIE-PAAGLTRSFMAFLID 339

Query: 540 ---ENFKGNL------------PLWLSPIQAIVTTIT--SSAVEYAQEIANLLKSHHLSI 582
              E+   N                L+P++A V  ++  +     A+++   L+    +I
Sbjct: 340 AYTEDEAPNTKGGMDKRTVLRLDPRLAPVKAAVLPLSRHADLSPKARDLGAELRKC-WNI 398

Query: 583 ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           + D     I  + R       P  +        + ++ +R   + T  +V++      L 
Sbjct: 399 DFDDAGA-IGRRYRRQDEVGTPFCVTVDFDSLQDNAVTVRERDAMTQDRVAMSSVADYLA 457


>gi|229192615|ref|ZP_04319576.1| Histidyl-tRNA synthetase 2 [Bacillus cereus ATCC 10876]
 gi|228590922|gb|EEK48780.1| Histidyl-tRNA synthetase 2 [Bacillus cereus ATCC 10876]
          Length = 423

 Score = 65.6 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 72/413 (17%), Positives = 139/413 (33%), Gaps = 55/413 (13%)

Query: 275 IFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           ++Q +    R   +  +Y+EI TP        +          ++   +      +  R+
Sbjct: 19  LWQYIEGQAREICRRYNYKEIRTPIF---EHTELFLRGVGDTTDIVQKEMYSFQDRGERS 75

Query: 334 FALKPM-NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
             L+P    P   +   + +      P +L   G ++R E   +     R R F Q    
Sbjct: 76  LTLRPEGTAPVVRSYVENKMFGDATQPTKLYYIGQMFRYERPQA----GRYRQFVQFGIE 131

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKI---MVKLSTRPEKRVGSDALWDDAENIMK 449
              + +   +   ++  L +  Y+  G + I   +  L     ++   DAL    E  + 
Sbjct: 132 AIGSNDPAIDA--EVIALAVEFYRGMGLKNIKVVLNSLGDAASRQAHRDALIAHFEPRIG 189

Query: 450 G---------------VLDTIKNSSQDRINT-----GVLLGEGAFYGPK----------- 478
                           +LD  K+ + + + T       L  + A Y  K           
Sbjct: 190 EFCSDCQSRLEKNPLRILDCKKDRNHELMGTAPSITEYLNEDSAIYYDKVQELLTMMDVP 249

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS--------EKCHPVMIHRAVFGS 530
           FE       G D+   T+    +    F A    S          E   P M       S
Sbjct: 250 FEKDPNLVRGLDYYQHTVFEIMSEAEGFGAITTLSGGGRYNGLVQEIGGPEMPGIGFAMS 309

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
           IER I  + +     LPL    I   V  +   A ++A ++A  L+   LS+E D+ +  
Sbjct: 310 IERLIMAL-KAENIELPLE-HSIDCYVVALGEKAKDHAAKVAFDLRKAGLSVEKDYLDRK 367

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  + +     K   + + G+ E  +  I ++   +   ++V+L      + +
Sbjct: 368 MKAQFKSADRLKAKFVAVLGEDELDKGIINLKDMATGEQEEVALDVFASYVAE 420


>gi|254416007|ref|ZP_05029763.1| histidyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420]
 gi|196177182|gb|EDX72190.1| histidyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420]
          Length = 523

 Score = 65.6 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 39/242 (16%), Positives = 94/242 (38%), Gaps = 24/242 (9%)

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQD--RI 463
           K    +  + +  G    ++K +       G D   D     ++ ++ T++  + D  +I
Sbjct: 289 KALEFMSQLGQLVGEPTEVLKEAQTLLCSHGID---DAGLEQLREIIKTLEFYNLDSSQI 345

Query: 464 NTGVLLGEG-AFYGPKFEYILKDAIGR-DWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPV 521
           +  + L  G  +Y     + +    G+ + Q            R++         +  P 
Sbjct: 346 SLDLGLSRGLQYYTGMI-FEIYHGAGKQERQICG-------GGRYDDLVGTFGGRQDTPA 397

Query: 522 MIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQ--AIVTTITSSAVEYAQEIANLLKSHH 579
                    +ER + + +E       +W    Q  A+V  ++     YA  +A  L+   
Sbjct: 398 TGFSY---GMER-LRLALEAEGK---VWQVQRQMDALVVPVSQDDAGYAIGVAQQLRQIG 450

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
           L++  D R ++++   +  + + IP  I+ G +E    ++ +++  S   Q++++ DA  
Sbjct: 451 LAVAMDLRGKSVSSNFQYANKQGIPYTILVGSEERQASNVVLKQMDSGEQQQLTVSDAAK 510

Query: 640 IL 641
            +
Sbjct: 511 HI 512


>gi|294788161|ref|ZP_06753404.1| alanine--tRNA ligase [Simonsiella muelleri ATCC 29453]
 gi|294483592|gb|EFG31276.1| alanine--tRNA ligase [Simonsiella muelleri ATCC 29453]
          Length = 873

 Score = 65.6 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/171 (19%), Positives = 67/171 (39%), Gaps = 12/171 (7%)

Query: 36  KKAVAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVA 95
           K AV     G     S  V +  +  I  +   +  +  HS  H+M +A++ +       
Sbjct: 525 KAAVFGQF-GVQVSGSLKVGDSVLAEIDNDIRDA-NMRNHSATHLMHKALREVLGNHVEQ 582

Query: 96  IGP-IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            G  +  +   +D    Q  + +E+A++E+++   I  +       +S E A++      
Sbjct: 583 KGSLVTAESTRFDISHNQAITPEEIAEVERRVNTAILANVAVDANIMSMEDAQKTGAMML 642

Query: 155 EAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKFFKLMKVA 204
              K          + V + + GE+  +LC G HV  TG +  F  + +  
Sbjct: 643 FGEKY--------GDEVRVLQMGEFSTELCGGTHVARTGDIGLFKIISESG 685


>gi|282164426|ref|YP_003356811.1| histidyl-tRNA synthetase [Methanocella paludicola SANAE]
 gi|282156740|dbj|BAI61828.1| histidyl-tRNA synthetase [Methanocella paludicola SANAE]
          Length = 434

 Score = 65.6 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 68/450 (15%), Positives = 141/450 (31%), Gaps = 77/450 (17%)

Query: 255 LFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDS 313
           +F   +   G   ++ +     + ++  +   +    + E+++P +    L++       
Sbjct: 1   MFMRFQSLKGFRDFYPEEMSARRKVLDKIFETVRPYGFREVDSPSLEMLELFRVKS---- 56

Query: 314 YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE- 372
              +    +  +   K  R   L P   P    +     KS +  P++      ++R E 
Sbjct: 57  --GDEILTQTFNFADKGKRDVTLIPELTPTMARMVVEREKSLKR-PIKWFSMPKMWRYEE 113

Query: 373 -PSGSLHGLMRVRGFTQDDAHVF------CTKEQMFNECLKIHNLIISIYKDF------- 418
             SG      R+R F Q +  +F         E +      +  L +     F       
Sbjct: 114 PQSG------RLREFYQLNVDIFGVPGPEADAEVLAAGIDIMLKLDLEGQFIFKVSDRRL 167

Query: 419 --GFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
             G  + M     R       D  +    +  K +L     +  D +  G LL      G
Sbjct: 168 MQGVLESMGIADRREAVFAAIDKRYKVTHSEFKELL---AKADLDDLKIGQLLSILDSRG 224

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC---HPVMIH--------- 524
           P  E + K       +    +  +    +     V  H E+     P +I          
Sbjct: 225 PMLEALQKLRGLISLENEQTRAGYESLEKLTDLLVMYHMEQYCELDPSVIRGLAYYTGTV 284

Query: 525 ----------RAVFG------SIERFIG------------IMIENFKGNLPLWLSP---I 553
                     RA+FG       IE F G             ++E       +W       
Sbjct: 285 FECYDTKGELRAIFGGGRYDKIIELFGGEPMPAVGFGMGDAVLEILMRRAKVWPEEKLTT 344

Query: 554 QAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
              + T ++  +E A  +A  L+     +ETD        +++  +      ++I G+KE
Sbjct: 345 DYFILTTSAQYMETALFLAQALREKEFIVETDLLGRNFGNQMKYANSIGAKYVLILGEKE 404

Query: 614 ASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +   + ++   +   +   ++  +  +TK
Sbjct: 405 MAGGQVSVKDMKTGEQRTEEVIRFLDSVTK 434


>gi|237740163|ref|ZP_04570644.1| histidyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
 gi|229422180|gb|EEO37227.1| histidyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
          Length = 413

 Score = 65.6 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 67/426 (15%), Positives = 146/426 (34%), Gaps = 72/426 (16%)

Query: 270 RKGWK-------IFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQ--QSGHWDSYRANM 318
            KG K       +    IS + +++     Y+   TP   +  L++       D     M
Sbjct: 7   PKGTKDIIGEDAVKYIYISNVTQEMFENYGYKFAKTPIFEETDLFKRGIGEATDVVEKEM 66

Query: 319 FAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLH 378
           +  K   D     R+  L+P N    V  +       +E   R    GS++R E   +  
Sbjct: 67  YTFKDKGD-----RSITLRPENTASMVRCYLENSIYAKEDVSRFYYNGSMFRYERPQA-- 119

Query: 379 GLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD 438
              R R F Q    VF  K  + +   ++  +  +     G   +  ++        GS 
Sbjct: 120 --GRQREFNQIGVEVFGEKSPILDA--EVIAMGYNFLTKLGITDL--EVKINSVGSKGSR 173

Query: 439 ALW-DDAENIMKGVLDTIKNSSQDRINTGVL-------LGEGAFY--GPKF-EYILKDAI 487
            ++ +      +  LD +    +DRIN   L        G+  FY   P   +Y+ +D  
Sbjct: 174 TIYREKLVEHFQSHLDDMCEDCKDRINRNPLRLLDCKVDGDKDFYKSAPSIIDYLFEDER 233

Query: 488 GRDWQCGT----------------IQVDFNLPSRFNAFYVN------------SHS---E 516
               +                     +D+   + F                    +   E
Sbjct: 234 KHYEEVKKYLTIFGVKFTEDPTLVRGLDYYSSTVFEIVTNKLGSQGTVLGGGRYDNLLKE 293

Query: 517 KCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLK 576
                +        +ER + ++ +N+  ++P         +  +    +E A +IA+ L+
Sbjct: 294 LGDKDIPAFGFAAGVERVMMLIGDNYPKDVPD------VYIAWLGDDTIETAMKIADSLR 347

Query: 577 SHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
             ++ +  D+ ++ +   +++    +    II G+ E ++  + ++ F +   ++V + +
Sbjct: 348 KENVKVYVDYSSKGMKSHMKKADKLETKYCIILGEDELNKGIVLLKDFSTREQKEVKIEE 407

Query: 637 AIPILT 642
            I  + 
Sbjct: 408 IINHIK 413


>gi|300363019|ref|ZP_07059189.1| serine--tRNA ligase [Lactobacillus gasseri JV-V03]
 gi|300353069|gb|EFJ68947.1| serine--tRNA ligase [Lactobacillus gasseri JV-V03]
          Length = 436

 Score = 65.6 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 77/188 (40%), Gaps = 9/188 (4%)

Query: 272 GWKIFQTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G  + + + ++ +    KD Y E+  P +++    Q +G +  +  +++ +   DD  K 
Sbjct: 170 GALLERAVSNFFLDENTKDGYTEVIPPYLVNDASMQGTGQFPKFTEDVYTIVDNDDPDKP 229

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFT 387
            R   L P      V  F   +   ++LP+ +  F   +R+E   +     GL+R+  F 
Sbjct: 230 -RDLTLIPTAEVPLVNYFRGKILDAKQLPINVTAFSPAFRSEAGSAGRDTRGLIRMHEFR 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +      ++  ++E  K+ +    + +  G    +V LST              +W  
Sbjct: 289 KVEMVKIVDEDSSWDELEKLTHNAEHLLQKLGLPYHVVALSTGDASFTSAKTYDLEVWMP 348

Query: 444 AENIMKGV 451
           A++  + +
Sbjct: 349 AQDKYREI 356


>gi|302386453|ref|YP_003822275.1| alanyl-tRNA synthetase [Clostridium saccharolyticum WM1]
 gi|302197081|gb|ADL04652.1| alanyl-tRNA synthetase [Clostridium saccharolyticum WM1]
          Length = 879

 Score = 65.6 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 61/149 (40%), Gaps = 15/149 (10%)

Query: 54  VREGSIEIITPEDPRSLAVI---RHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFD 109
           ++ G +  +T +            HS  H++ +A++++        G  +  D   +DF 
Sbjct: 544 LQSGDV--VTLKVCEGNRQNTGKNHSATHLLQKALRTVLGSHVEQAGSFVDGDKLRFDFT 601

Query: 110 KEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKE 169
                + +E+ Q+E  + E I    P   + ++ E A++         K          +
Sbjct: 602 HFSAMTPEEIRQVETLVNEKIKESLPVKTEIMTLEDAKKSGAMALFGEKY--------GD 653

Query: 170 NVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
            V + + G++  +LC G H+ +TG +  F
Sbjct: 654 TVRVVKMGDFSTELCGGTHINNTGVIGSF 682


>gi|332285168|ref|YP_004417079.1| seryl-tRNA synthetase [Pusillimonas sp. T7-7]
 gi|330429121|gb|AEC20455.1| seryl-tRNA synthetase [Pusillimonas sp. T7-7]
          Length = 450

 Score = 65.6 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 35/230 (15%), Positives = 77/230 (33%), Gaps = 20/230 (8%)

Query: 242 EKRDHRKLAREMDL-FHIAEDGSGVIFWHRKG--WKIFQTLISYMRRKI--KDDYEEINT 296
           E +DH  L   + L F  A   SG  F   +G   ++ + L  +M      +  Y+E  T
Sbjct: 145 EPKDHVALGEPLGLDFETARKLSGARFMMLRGPIARLHRALAQFMLDLQTTEHGYQECYT 204

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCAD--------DTIKDLRTFALKPMNCPGHVAVF 348
           P +++      +G    ++ +MF V            +         L   +        
Sbjct: 205 PYIVNSSTLFGTGQLPKFKDDMFWVTKGGQDDEASGQEEESAHEDLYLISTSEITLAGSV 264

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECL 405
              + +   LP+++      +R+E         G++R   F + +       +  ++   
Sbjct: 265 RDTIVASEALPLKMTAHTPCFRSEAGSGGRDTRGMIRQHQFDKVEMVQIVHPDHSYDALE 324

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
           ++     ++ +  G    +V L                +W  A+N  + +
Sbjct: 325 EMVGHAEAVLQRLGVAYRVVLLCGGDMGFGAAKTYDLEVWLPAQNTWREI 374


>gi|308171904|ref|YP_003918609.1| seryl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|307604768|emb|CBI41139.1| seryl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|328551712|gb|AEB22204.1| seryl-tRNA synthetase [Bacillus amyloliquefaciens TA208]
 gi|328909972|gb|AEB61568.1| seryl-tRNA synthetase [Bacillus amyloliquefaciens LL3]
          Length = 425

 Score = 65.6 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 82/225 (36%), Gaps = 21/225 (9%)

Query: 240 ESEKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRRKIKDDYE--E 293
             E + H  +A  +++          GS  +F+   G ++ + L ++M     D+Y   E
Sbjct: 134 SYEPKPHWDIADHLNILDFERASKVTGSRFVFYKGLGARLERALYNFMLDLHVDEYHYTE 193

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           +  P ++++     +G    +  + F ++           + L P        +    + 
Sbjct: 194 VIPPYMVNRTSMTGTGQLPKFEEDAFKIR--------EEDYFLIPTAEVPITNMHRDEIL 245

Query: 354 SYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
           S   LP+  A F + +R+E   +     GL+R   F + +   F   E  + E  K+ N 
Sbjct: 246 SDDALPINYAAFSACFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYEELEKLTNQ 305

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENIMKGV 451
              + +       ++ + T              +W  +++  + +
Sbjct: 306 AERVLQLLELPYRVMSMCTGDLGFTAAKKYDIEVWIPSQDTYREI 350


>gi|302331781|gb|ADL21974.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus JKD6159]
          Length = 428

 Score = 65.6 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 51/372 (13%), Positives = 126/372 (33%), Gaps = 35/372 (9%)

Query: 91  EVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIA--RDSPFLKQYLSHEKARE 148
           ++++            +   + P   DE+ +++++ +++I+   +    +  +S E A +
Sbjct: 3   DIRLFRNEPDTVKCKIELRGDDPKVVDEILELDEQRRKLISATEEMKARRNKVSEEIALK 62

Query: 149 LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYW 208
               +     +  + ++         +  E  D         T  + +   L+       
Sbjct: 63  KRNKENADDVIAEMRTLGDDIKEKDNQLNE-IDNKM------TSILCRIPNLISDDVPQG 115

Query: 209 RGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFW 268
             D +   + + +GT      E   +   +EE +  D  + A+      +          
Sbjct: 116 ESDEDNVEVKK-WGTPREFDFEPKAHWDIVEELKMADFDRAAKVSGARFVYLTNE----- 169

Query: 269 HRKGWKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADD 326
              G ++ + L++YM  K   +  Y E+  PQ+++      +G    +  ++F V     
Sbjct: 170 ---GAQLERALMNYMITKHTTQHGYTEMMVPQLVNADTMYGTGQLPKFEEDLFKV----- 221

Query: 327 TIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRV 383
              +       P         + + +     LP +     + +R+E   +     GL+R+
Sbjct: 222 ---EKEGLYTIPTAEVPLTNFYRNEIIQPGVLPEKFTGQSACFRSEAGSAGRDTRGLIRL 278

Query: 384 RGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDA 439
             F + +   F   E  +N   ++     +I ++ G     V L T              
Sbjct: 279 HQFDKVEMVRFEQPEDSWNALEEMTTNAEAILEELGLPYRRVILCTGDIGFSASKTYDLE 338

Query: 440 LWDDAENIMKGV 451
           +W  + N  K +
Sbjct: 339 VWLPSYNDYKEI 350


>gi|319405869|emb|CBI79501.1| Alanyl-tRNA synthetase [Bartonella sp. AR 15-3]
          Length = 889

 Score = 65.6 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/164 (20%), Positives = 70/164 (42%), Gaps = 5/164 (3%)

Query: 45  GKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DG 103
           GKV      + +  +E+    + R      HS  H++ EA++ I        G ++    
Sbjct: 535 GKVKSGQAKISDC-VELTVDSERRRKIRANHSATHLLHEALRRILGPHVAQKGSLVSPSR 593

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKA--RELFESKKEAYKVEI 161
             +DF   +P SS+EL ++E    +I+ ++S    + ++ + A          E Y  E+
Sbjct: 594 LRFDFSHPKPISSEELKRVEDLANDIVLQNSQVTTRLMALDDAVFEGAVALFGEKYGDEV 653

Query: 162 -LESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVA 204
            + S+  +      ++    +LC G HV+ TG +     + + +
Sbjct: 654 RVVSMGERCEPIALKKHWSIELCGGTHVQRTGDIGLIHIVAESS 697


>gi|125719062|ref|YP_001036195.1| histidyl-tRNA synthetase [Streptococcus sanguinis SK36]
 gi|166228621|sp|A3CR40|SYH_STRSV RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|125498979|gb|ABN45645.1| Histidyl-tRNA synthetase, putative [Streptococcus sanguinis SK36]
          Length = 426

 Score = 65.6 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 56/418 (13%), Positives = 125/418 (29%), Gaps = 68/418 (16%)

Query: 269 HRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
             +    +Q +  + R+  +  +Y EI TP       ++          ++   +  D  
Sbjct: 13  LPQESAKWQYVEDFARKTFRKYNYGEIRTPIF---EHYEVISRSVGDTTDIVTKEMYDFY 69

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKS-----YRELPVRLAEFGSVYRNEPSGSLHGLMR 382
            K  R   L+P    G   V    +++       + PV++   GS++R E   +     R
Sbjct: 70  DKGDRHITLRP---EGTAPVVRSYVENKLFAPEVQKPVKVYYMGSMFRYERPQA----GR 122

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD------------FGFEKIMVKLSTR 430
           +R F Q  A  F +        +++  +    +KD             G  +        
Sbjct: 123 LREFHQIGAECFGSSNPA--TDVEMIAMAAQFFKDIGITNVSLELNSLGNPESRAAYRQA 180

Query: 431 PEKRVG------SDALWDDAENIMKGVLDTIKNSSQDRIN------TGVLLGEGAFYGP- 477
               +       S       E     VLD+ +   +  +         +     A++   
Sbjct: 181 LIDYLTPLKASLSADSQRRLEENPLRVLDSKEPEDKAAVEGAPSILDYLDEESSAYFAAV 240

Query: 478 -------------------KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC 518
                                +Y          +    Q+      R++         + 
Sbjct: 241 RSMLETLQIPYVINTNMVRGLDYYNHTIFEFTTEVAGSQLTICAGGRYDGLVAYFGGPET 300

Query: 519 HPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSH 578
             V     +    ER + ++  + +G      + +   V  + + A   A E+   L++ 
Sbjct: 301 PGVGFGMGL----ERLLLVL--DKQGVELPIETALDVYVAVLGADANGRALELVQALRAQ 354

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
             + E D+ +  +  + +     K   +I  G+ E     + ++   +     VSL  
Sbjct: 355 GFAAERDYLDRKLKAQFKSADNFKAKTLITLGESEVESGRVTVKNNHNREEITVSLDQ 412


>gi|294083659|ref|YP_003550416.1| alanyl-tRNA synthetase [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292663231|gb|ADE38332.1| alanyl-tRNA synthetase [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 879

 Score = 65.6 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 35/149 (23%), Positives = 63/149 (42%), Gaps = 9/149 (6%)

Query: 53  PVREGSIEI-----ITPEDPRSLAVI-RHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFY 105
            + +GS+++     +  +  R L +   HS  H++ EA++ +  E     G  +  D   
Sbjct: 535 TITKGSLDVGNDVRLDIDVARRLRLRANHSATHLLHEALREVLGEHVAQKGSMVGPDRLR 594

Query: 106 YDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELF--ESKKEAYKVEILE 163
           +DF   +  + DELA+++  +   +  +S    + ++ E A EL       E Y  E+  
Sbjct: 595 FDFSHPKAMTEDELARVQAIVNSRVQMNSDVSTRIMTPEAAIELGALALFGEKYGDEVRV 654

Query: 164 SIPAKENVTLYRQGEWFDLCRGPHVRSTG 192
                E     R     +LC G HV  TG
Sbjct: 655 VQMGGETDIKGRSAWSVELCGGTHVNRTG 683


>gi|154483551|ref|ZP_02025999.1| hypothetical protein EUBVEN_01255 [Eubacterium ventriosum ATCC
           27560]
 gi|149735461|gb|EDM51347.1| hypothetical protein EUBVEN_01255 [Eubacterium ventriosum ATCC
           27560]
          Length = 886

 Score = 65.6 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 59/133 (44%), Gaps = 10/133 (7%)

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIAR 132
            HS  H++ +A++++  E     G  ++ D   +DF   Q  + +E+ ++E  + E IA 
Sbjct: 572 NHSATHLLQKALKTVLGEHVEQAGSYVDADRLRFDFTHFQAMTKEEIEKVENLVNEQIAT 631

Query: 133 DSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRST 191
               + + +S ++A+E         K          E V +   G++  +LC G HV +T
Sbjct: 632 GLDVITKEMSLDEAKETGAMALFGEKY--------GEKVRVVSMGDYSIELCGGTHVSNT 683

Query: 192 GQVKKFFKLMKVA 204
             +  F  + +  
Sbjct: 684 NVISSFKIISESG 696


>gi|88813103|ref|ZP_01128344.1| alanyl-tRNA synthetase [Nitrococcus mobilis Nb-231]
 gi|88789587|gb|EAR20713.1| alanyl-tRNA synthetase [Nitrococcus mobilis Nb-231]
          Length = 869

 Score = 65.6 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/139 (23%), Positives = 64/139 (46%), Gaps = 10/139 (7%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDELAQIEK 124
           + R   V+ HS  H++  A++ +  E     G  +  D   +DF   +P S ++L ++E+
Sbjct: 548 ERRQATVLNHSATHLLHAALRRVLGEHAQQKGSLVAPDRLRFDFTHFEPVSREQLERVER 607

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLC 183
            + + I  +     +Y+S+++A +         K          + V + R GE+  +LC
Sbjct: 608 LVNDRIRANDVADVRYMSYDEAMDFGAVALFGEKY--------ADTVRVMRFGEFSTELC 659

Query: 184 RGPHVRSTGQVKKFFKLMK 202
            G HVR TG +  F  + +
Sbjct: 660 GGTHVRRTGDIGFFKLVSE 678


>gi|304440318|ref|ZP_07400207.1| alanine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
 gi|304371070|gb|EFM24687.1| alanine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
          Length = 874

 Score = 65.6 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/142 (21%), Positives = 64/142 (45%), Gaps = 11/142 (7%)

Query: 64  PEDPRSLAVIR-HSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY-YDFDKEQPFSSDELAQ 121
            +  R   + R HS  H++ +A++ +        G ++ D +  +DF   +  S ++L +
Sbjct: 553 IDVERRNNIRRNHSVTHLLHKALKEVLGNHVNQAGSLVRDDYMRFDFTHFEAISQEDLKK 612

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-F 180
           IE+ + + I R  P      + ++A EL        K          + V + + G++  
Sbjct: 613 IEEIVNKEIFRALPVETIITNPKEAAELGAVGLFEEKY--------GDIVRVVKMGDFSI 664

Query: 181 DLCRGPHVRSTGQVKKFFKLMK 202
           +LC G HV++T ++  F  L +
Sbjct: 665 ELCGGTHVKNTSEIGMFKILQE 686


>gi|218290707|ref|ZP_03494789.1| seryl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1]
 gi|218239245|gb|EED06444.1| seryl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1]
          Length = 426

 Score = 65.6 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/223 (15%), Positives = 86/223 (38%), Gaps = 21/223 (9%)

Query: 242 EKRDHRKLAREMDL----FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEIN 295
           E + H ++A  +D+      +   GS  + +   G ++ + L ++M     +   Y E+ 
Sbjct: 136 EPKPHWEIAEALDIVDSERAVKITGSRFVLYKGLGARLERALANFMLDFHVERHGYTEMF 195

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
              + ++     +G+   +   MF +        +   + L P         +   + S 
Sbjct: 196 PAFIANEESLIGTGNLPKFGDEMFKI--------EGLPYYLIPTAEVPLTNYYRDEILSA 247

Query: 356 RELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
            +LPV+ A + + +R+E   +     GL+R+  F + +    C  EQ +    ++     
Sbjct: 248 DQLPVKFAGYSACFRSEAGSAGKDTRGLIRLHQFQKVELVNLCLPEQSYEVLEQLTREAE 307

Query: 413 SIYKDFGFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGV 451
           ++ +        +++ T      + +     +W  A+N  + +
Sbjct: 308 AVLEALQLPYRRIEICTGDLGAKDAKKYDIEVWLPAQNRYREI 350


>gi|49484921|ref|YP_042142.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus MSSA476]
 gi|56749400|sp|Q6GD81|SYS_STAAS RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|49243364|emb|CAG41781.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus MSSA476]
          Length = 428

 Score = 65.6 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 53/342 (15%), Positives = 113/342 (33%), Gaps = 31/342 (9%)

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR-QGEWFD- 181
           K + EI+  D    K   + E+ +       E   ++      A + +   R  G+    
Sbjct: 26  KVVDEILELDEQRRKLISATEEMKARRNKVSEEIALKKRNKENADDVIAEMRTLGDDIKE 85

Query: 182 ---LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
                     + TG + +   L+         D +   + + +GT      E   +   +
Sbjct: 86  KDSQLNEIDNKMTGILCRIPNLISDDVPQGESDEDNVEVKK-WGTPREFSFEPKAHWDIV 144

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI--KDDYEEINT 296
           EE +  D  + A+      +             G ++ + L++YM  K   +  Y E+  
Sbjct: 145 EELKMADFDRAAKVSGARFVYLTNE--------GAQLERALMNYMITKHTTQHGYTEMMV 196

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           PQ+++      +G    +  ++F V        +       P         + + +    
Sbjct: 197 PQLVNADTMYGTGQLPKFEEDLFKV--------EKEGLYTIPTAEVPLTNFYRNEIIQPG 248

Query: 357 ELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
            LP +     + +R+E   +     GL+R+  F + +   F   E  +N   ++     +
Sbjct: 249 VLPEKFTGQSACFRSEAGSAGRDTRGLIRLHQFDKVEMVRFEQPEDSWNALEEMTTNAEA 308

Query: 414 IYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
           I ++ G     V L T              +W  + N  K +
Sbjct: 309 ILEELGLPYRRVILCTGDIGFSASKTYDLEVWLPSYNDYKEI 350


>gi|313473046|ref|ZP_07813533.1| serine--tRNA ligase [Lactobacillus jensenii 1153]
 gi|313448839|gb|EEQ67733.2| serine--tRNA ligase [Lactobacillus jensenii 1153]
          Length = 423

 Score = 65.6 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 54/354 (15%), Positives = 121/354 (34%), Gaps = 41/354 (11%)

Query: 108 FDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKV--EILESI 165
            D+++     E   ++ K  E+    +   +   + + A +      E  K   E +  +
Sbjct: 22  IDEKRRAKLSETEALKAKRNEVSKEIAAKKRNKENADDAIKAMREVGEQIKKLDEEVAEL 81

Query: 166 PAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAW 225
             K+N  L R   + D    P        ++  K  +     +                 
Sbjct: 82  TEKQNYILLRLPNFPDDS-DPIGPDESYNQEVRKWNEPTKFNF----------------- 123

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISY-MR 284
               E   +    ++    D    A+      +   G+        G  + + + ++ + 
Sbjct: 124 ----EPKAHWDLGDDLHILDFDTAAKVSGARFVYYKGA--------GALLERAVYNFFLD 171

Query: 285 RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
              K+ Y E+  P +++    Q +G +  +  +++ +   DD  K L    L P      
Sbjct: 172 ENTKEGYTEVIPPYLVNDDSMQGTGQFPKFTEDVYTIVDNDDPDKPL-NLTLIPTAEVPL 230

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMF 401
           V  F   +   ++LP+ +      +R+E   +     GL+R+  F + +    C  E+ +
Sbjct: 231 VNYFRGDIVDGKKLPINVTALTPAFRSEAGSAGRDTRGLIRMHQFNKVEMVKVCKPEESW 290

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
           NE  ++ +    + +  G    +V LST              +W  A+N  + +
Sbjct: 291 NELDRLTHNAEHLLQKLGLPYHVVALSTGDASFTSAKTYDLEVWMPAQNKYREI 344


>gi|326789959|ref|YP_004307780.1| seryl-tRNA synthetase [Clostridium lentocellum DSM 5427]
 gi|326540723|gb|ADZ82582.1| seryl-tRNA synthetase [Clostridium lentocellum DSM 5427]
          Length = 427

 Score = 65.6 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 40/255 (15%), Positives = 88/255 (34%), Gaps = 21/255 (8%)

Query: 200 LMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIA 259
             K++    R  +    L  +        +          + E + H  L   +D+    
Sbjct: 93  DEKISNIVMRLPNLPNPLVPVGKDDTENFEMRKIGEPRNFDFEIKAHWDLGENLDILDFE 152

Query: 260 E----DGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDS 313
           +     GS  +F+   G ++ + ++++M     D   Y E+  P ++++     +G    
Sbjct: 153 KAAKVTGSRFVFYKGLGARLERAIMNFMLDMHVDKHGYTEVFPPLMVNRASMTGTGQLPK 212

Query: 314 YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP 373
           +  + F V   D        + L P        ++   +   ++L ++   +   +R E 
Sbjct: 213 FEEDAFKVVDTD--------YFLIPTAEVPVTNMYRDQILDGKDLVIKHCAYTPCFRAEA 264

Query: 374 SGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR 430
             +     G++R   F + +   F   E  ++E  K+ N    I K  G    +V+L T 
Sbjct: 265 GSAGRDTRGIIRQHQFNKVEMVKFTKPEDSYDELEKLTNDAEDILKTLGLPYRVVRLCTG 324

Query: 431 PEKR----VGSDALW 441
                        +W
Sbjct: 325 DLGFSSAMTYDIEVW 339


>gi|121998432|ref|YP_001003219.1| alanyl-tRNA synthetase [Halorhodospira halophila SL1]
 gi|205830063|sp|A1WXK5|SYA_HALHL RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|121589837|gb|ABM62417.1| alanyl-tRNA synthetase [Halorhodospira halophila SL1]
          Length = 863

 Score = 65.6 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 61/146 (41%), Gaps = 13/146 (8%)

Query: 62  ITPEDPRSLA---VIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSD 117
           +T    R      V  HS  H++  A++ I  +     G  +  D   +DF   +  S +
Sbjct: 536 VTARVDRGTREATVRNHSATHLLHAALREILGDHVQQKGSLVAPDRLRFDFSHYEAPSRE 595

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +L +IE ++ + I  + P    ++++E+A ++        K          + V +   G
Sbjct: 596 DLERIEARVNQEILTNHPVEAAHMAYEEAVQVGAMALFGEKY--------GDTVRVISLG 647

Query: 178 EW-FDLCRGPHVRSTGQVKKFFKLMK 202
           ++  +LC G H   TG +  F  + +
Sbjct: 648 DYSQELCGGTHAARTGDIGLFKIIDE 673


>gi|254444041|ref|ZP_05057517.1| glycyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235]
 gi|198258349|gb|EDY82657.1| glycyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235]
          Length = 502

 Score = 65.2 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 50/328 (15%), Positives = 106/328 (32%), Gaps = 53/328 (16%)

Query: 335 ALKPMNCPGHVAVFNHGLKSYR-ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
            L+P    G  A + + + + R ++P  +A+ G  +RNE +   + + R R F Q +   
Sbjct: 208 YLRPETAQGIFANYKNVVDTGRVKIPFGIAQIGKAFRNEITPR-NFIFRSREFEQMEIEY 266

Query: 394 FCTKEQMFNECLKI-HNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
           F + +  ++E  +       +     G  + M          +G D     A        
Sbjct: 267 FISPDVDWSEAHQDWIKYCWNWLISIGLPEEM----------LGKDVHEKLAHYAKACTD 316

Query: 453 DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
            T K    ++   G+            ++ L             Q   +       F  +
Sbjct: 317 ITFKFPFGEQELWGIAARG--------DFDL------------SQHQEHSGKSMEIF--D 354

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIM----IENFKG-------NLPLWLSPIQAIVTT-- 559
             S+K     +     G    F+ I+     E+  G            ++P +  V    
Sbjct: 355 EASKKKFVPHVIEPSLGVDRLFLAILGAAYTEDEVGGEKRSLMKFHPRIAPYKVAVLPLV 414

Query: 560 -ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK--EASE 616
                 VE A+++   L+    ++  D     I  + R       P  +       E   
Sbjct: 415 KNKPELVEIAEKLYKKLQRR-YNVFWDQSGA-IGRRYRRQDEIGTPWCVTVDFDTIEKEG 472

Query: 617 RSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           ++  +R   +T  ++V+  + +  L ++
Sbjct: 473 QTFTLRDRDTTEQRRVNEAELLAFLDEQ 500


>gi|30264473|ref|NP_846850.1| histidyl-tRNA synthetase [Bacillus anthracis str. Ames]
 gi|47529931|ref|YP_021280.1| histidyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49187294|ref|YP_030546.1| histidyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|49481486|ref|YP_038454.1| histidyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|52141104|ref|YP_085725.1| histidyl-tRNA synthetase [Bacillus cereus E33L]
 gi|165871996|ref|ZP_02216637.1| histidyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167640711|ref|ZP_02398971.1| histidyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|170709260|ref|ZP_02899680.1| histidyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|254724670|ref|ZP_05186453.1| histidyl-tRNA synthetase [Bacillus anthracis str. A1055]
 gi|39932344|sp|Q81LI6|SYH2_BACAN RecName: Full=Histidyl-tRNA synthetase 2; AltName:
           Full=Histidine--tRNA ligase 2; Short=HisRS 2
 gi|81394747|sp|Q6HDC2|SYH2_BACHK RecName: Full=Histidyl-tRNA synthetase 2; AltName:
           Full=Histidine--tRNA ligase 2; Short=HisRS 2
 gi|81686102|sp|Q634E2|SYH2_BACCZ RecName: Full=Histidyl-tRNA synthetase 2; AltName:
           Full=Histidine--tRNA ligase 2; Short=HisRS 2
 gi|30259131|gb|AAP28336.1| histidine--tRNA ligase [Bacillus anthracis str. Ames]
 gi|47505079|gb|AAT33755.1| histidyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49181221|gb|AAT56597.1| histidyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|49333042|gb|AAT63688.1| histidine--tRNA ligase (histidyl-tRNA synthetase) [Bacillus
           thuringiensis serovar konkukian str. 97-27]
 gi|51974573|gb|AAU16123.1| histidine--tRNA ligase (histidyl-tRNA synthetase) [Bacillus cereus
           E33L]
 gi|164712286|gb|EDR17822.1| histidyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167511283|gb|EDR86669.1| histidyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|170125836|gb|EDS94743.1| histidyl-tRNA synthetase [Bacillus anthracis str. A0389]
          Length = 423

 Score = 65.2 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 70/413 (16%), Positives = 139/413 (33%), Gaps = 55/413 (13%)

Query: 275 IFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           ++Q +    R   +  +Y+EI TP        +          ++   +      +  R+
Sbjct: 19  LWQYIEGQAREICRRYNYKEIRTPIF---EHTELFLRGVGDTTDIVQKEMYSFQDRGERS 75

Query: 334 FALKPM-NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
             L+P    P   +   + +      P +L   G ++R E   +     R R F Q    
Sbjct: 76  LTLRPEGTAPVVRSYVENKMFGDATQPTKLYYIGQMFRYERPQA----GRYRQFVQFGIE 131

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKI---MVKLSTRPEKRVGSDALWDDAENIMK 449
              + +   +   ++  L +  Y+  G + I   +  L     ++   DAL    E  + 
Sbjct: 132 AIGSNDPAIDA--EVIALAVEFYRGMGLKNIKVVLNSLGDAASRQAHRDALIAHFEPRIG 189

Query: 450 G---------------VLDTIKNSSQDRINT-----GVLLGEGAFYGPK----------- 478
                           +LD  K+ + + + T       L  + A Y  K           
Sbjct: 190 EFCSDCQSRLEKNPLRILDCKKDRNHELMGTAPSITEYLNEDSAVYYDKVQELLTMMDVP 249

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS--------EKCHPVMIHRAVFGS 530
           FE       G D+   T+    +    F A    S          E   P M       S
Sbjct: 250 FEKDPNLVRGLDYYQHTVFEIMSEAEGFGAITTLSGGGRYNGLVQEIGGPEMPGIGFAMS 309

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
           IER I  + +     LP+    I   V  +   A ++A ++A  L+   L++E D+ +  
Sbjct: 310 IERLIMAL-KAENIELPIE-HSIDCYVVALGEKAKDHAAKVAFDLRKAGLAVEKDYLDRK 367

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  + +     K   + + G+ E  +  I ++   +   ++V+L      + +
Sbjct: 368 MKAQFKSADRLKAKFVAVLGEDELDKGIINLKDMATGEQEEVALDVFASYVAE 420


>gi|209526080|ref|ZP_03274612.1| histidyl-tRNA synthetase [Arthrospira maxima CS-328]
 gi|209493468|gb|EDZ93791.1| histidyl-tRNA synthetase [Arthrospira maxima CS-328]
          Length = 441

 Score = 65.2 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 64/418 (15%), Positives = 121/418 (28%), Gaps = 78/418 (18%)

Query: 276 FQTLISYMRRKIKDD-YEEINTPQVLDQHLWQ--QSGHWDSYRANMFAVKCADDTIKDLR 332
           +Q + S     +    Y+EI TP      L++       D     M+      D     R
Sbjct: 37  WQWVASVAEETLARGNYQEIRTPIFEPTALFERGIGEATDVVGKEMYTFCDRGD-----R 91

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
           +  L+P    G V  +            RL   G ++R E   +     R R F Q    
Sbjct: 92  SITLRPEGTAGVVRAYIERKLFANPGVQRLWYMGPMFRYERPQA----GRQRQFHQLGVE 147

Query: 393 VFCTKEQMF---------------------------------NECLKIHNLIISIYKDFG 419
           V  + +                                        +     ++ ++D  
Sbjct: 148 VLGSDDPRADVEVIAVAVDILKSLGVTNLHLNLNSVGDRTDRQNYRQALVDYLTPFQDEL 207

Query: 420 FEKIMVKLSTRPEKRVGS-DALWDDAENIMKGVLDTIKNSSQ----------------DR 462
            +    +L+  P + + S D    +       +LD +   SQ                  
Sbjct: 208 DQDSRDRLTRNPMRILDSKDERTQEITRDAPSILDYLGERSQSHFERVQYLIKELGISYT 267

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVM 522
           +N  ++ G   +    FE I  D   +   CG  + D           V        P +
Sbjct: 268 LNPRLVRGLDYYTHTAFEIISDDLGAQATVCGGGRYDG---------LVQELGGPEVPAV 318

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSI 582
                    ER I ++ +    + P  ++P    + +    A   +  +A  L+   L +
Sbjct: 319 GWAIGL---ERLIILLQQ---LHQPPQVTPE-LYLVSRGEKAEANSLILAQKLRQAGLRV 371

Query: 583 ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
           E D        + +          ++ GD EA   ++ ++   S      + +D I  
Sbjct: 372 ELDLSGSAFGKQFKRADRSGAVACLVLGDAEAIAGTVNLKWLKSGEQTVFNQVDLIAK 429


>gi|156934612|ref|YP_001438528.1| seryl-tRNA synthetase [Cronobacter sakazakii ATCC BAA-894]
 gi|166221438|sp|A7MER7|SYS_ENTS8 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|156532866|gb|ABU77692.1| hypothetical protein ESA_02446 [Cronobacter sakazakii ATCC BAA-894]
          Length = 430

 Score = 65.2 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/188 (13%), Positives = 62/188 (32%), Gaps = 10/188 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M     +   Y E   P +++      +G    +  ++F  +  ++   D
Sbjct: 170 ARLHRALSQFMLDLHTEEHGYSENYVPYLVNHDTLYGTGQLPKFAGDLFHTRPLEEEA-D 228

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
              +AL P        +    +     LP+++      +R+E         GL+R+  F 
Sbjct: 229 SSNYALIPTAEVPLTNLVRDEIIDEESLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFD 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E       ++      + +  G     V L +              +W  
Sbjct: 289 KVEMVQVVRPEDSMQALEEMTGHAEKVLQLLGLPYRKVLLCSGDMGFGARKTYDLEVWLP 348

Query: 444 AENIMKGV 451
           A++  + +
Sbjct: 349 AQDTYREI 356


>gi|325279156|ref|YP_004251698.1| seryl-tRNA synthetase [Odoribacter splanchnicus DSM 20712]
 gi|324310965|gb|ADY31518.1| seryl-tRNA synthetase [Odoribacter splanchnicus DSM 20712]
          Length = 424

 Score = 65.2 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 36/226 (15%), Positives = 74/226 (32%), Gaps = 20/226 (8%)

Query: 238 LEESEKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYE 292
            +      H +LAR+ DL          G+G   +   G ++ + LI++ +   IK  Y+
Sbjct: 135 QKHENDLPHWELARKYDLIDFETGVKITGAGFPLYKGLGARLQRALINFFLDENIKAGYQ 194

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P +++            Y       K       +     L P        ++   +
Sbjct: 195 EVQPPLMVNADS--------GYGTGQLPDKDGQMYYVNEDNLYLIPTAEVPVTNIYRDVI 246

Query: 353 KSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
               +LPV+   + + +R E       + GL R+  F + +       E  +     +  
Sbjct: 247 LDGDQLPVKNTAYSACFRREAGSYGKDVRGLNRLHQFDKVEIVQITRPEVSYEALEGMVK 306

Query: 410 LIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
            + S+    G    +V+L                ++  A+     V
Sbjct: 307 HVESLLIKLGLPYRIVRLCGGDISFTSALTFDFEVYSKAQEKWLEV 352


>gi|317050904|ref|YP_004112020.1| alanyl-tRNA synthetase [Desulfurispirillum indicum S5]
 gi|316945988|gb|ADU65464.1| alanyl-tRNA synthetase [Desulfurispirillum indicum S5]
          Length = 893

 Score = 65.2 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/138 (22%), Positives = 61/138 (44%), Gaps = 11/138 (7%)

Query: 63  TPEDPRSLAV-IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSDELA 120
           T    R   + + HS  H++  A++S   E     G ++EDG   +DF   +  + +EL 
Sbjct: 568 TVNSRRRRNITLNHSATHLLHAALKSTVGEHVRQAGSLVEDGKLRFDFTHWKGLTPEELQ 627

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW- 179
            +E ++   +  +    K+ ++ + A     +     K          ++V +   G++ 
Sbjct: 628 GVEDQVNAQVMANHAVRKELMTLDDAVARGATALFDEKY--------GDDVRVITMGDYS 679

Query: 180 FDLCRGPHVRSTGQVKKF 197
            +LC G HV +TGQ+  F
Sbjct: 680 MELCGGTHVDATGQIGLF 697


>gi|74316613|ref|YP_314353.1| histidyl-tRNA synthetase [Thiobacillus denitrificans ATCC 25259]
 gi|123745548|sp|Q3SL69|SYH_THIDA RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|74056108|gb|AAZ96548.1| Histidyl-tRNA synthetase, class IIa [Thiobacillus denitrificans
           ATCC 25259]
          Length = 419

 Score = 65.2 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 56/427 (13%), Positives = 130/427 (30%), Gaps = 75/427 (17%)

Query: 269 HRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
                  +Q   + +R  ++   Y E+ TP +    L++++    +           D+ 
Sbjct: 15  LPDAADAWQGFEAIVRDWLRRYGYREMRTPILEHTGLFKRAIGEVTDIVEKEMYTFVDEL 74

Query: 328 IKDLRTFALKPMN-----CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMR 382
             +  T   +           H  +++ G + +   P+        +R+E         R
Sbjct: 75  NGESLTLRPEGTASSVRAVIQHNLLYDGGKRLWYSGPM--------FRHERPQK----GR 122

Query: 383 VRGFTQD--DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK-------------IMVKL 427
            R F Q   +A  F   +       ++  +   ++++ G                   + 
Sbjct: 123 YRQFHQVGVEALGFAGPDVDA----ELIVMCADLWRELGIAPTLQLNTLGDHGARQRHRS 178

Query: 428 STRPEKRVGSDALWDDAENIMKG-----------VLDTIKNSSQDRINTGVLLGEGAFY- 475
                     D L  DA+  +              +  +   +   ++         F  
Sbjct: 179 KLIAYYEAHRDVLDADAQRRLHSNPLRILDSKNPAMQALNAEAPRLLDELEDEALNHFDA 238

Query: 476 --------GPKFEYILKDAIGRDWQCGTI----------QVDFNLPSRFNAFYVNSHSEK 517
                   G  FE   +   G D+   T+          Q       R++        + 
Sbjct: 239 LQGLLRANGIAFEINPRLVRGLDYYNRTVFEWVTDQLGAQGTVCAGGRYDGLVEQLGGKP 298

Query: 518 CHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKS 577
                    +    ER + ++  + K  +P       A +     +A  +A + A  L+ 
Sbjct: 299 APAAGFAMGI----ERLLALVETSGKPIVPAVPD---AYIVHAGDTADAFAWQAAATLRG 351

Query: 578 HHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR-RFGSTTTQKVSLLD 636
             L++       +   ++++    +    +I GD+EA+ + + ++   G+    +V L  
Sbjct: 352 AGLAVVLHCGGGSFKSQMKKADASRARYAVIIGDEEAAAQQVSVKPLRGTAEQTRVELAL 411

Query: 637 AIPILTK 643
           AI  L K
Sbjct: 412 AIEYLKK 418


>gi|258510034|ref|YP_003183468.1| seryl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257476760|gb|ACV57079.1| seryl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 426

 Score = 65.2 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/223 (15%), Positives = 86/223 (38%), Gaps = 21/223 (9%)

Query: 242 EKRDHRKLAREMDL----FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEIN 295
           E + H ++A  +D+      +   GS  + +   G ++ + L ++M     +   Y E+ 
Sbjct: 136 EPKPHWEIAEALDIVDSERAVKITGSRFVLYKGLGARLERALANFMLDFHVERHGYTEMF 195

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
              + ++     +G+   +   MF +        +   + L P         +   + S 
Sbjct: 196 PAFIANEESLIGTGNLPKFGDEMFKI--------EGLPYYLIPTAEVPLTNYYRDEILSA 247

Query: 356 RELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
            +LPV+ A + + +R+E   +     GL+R+  F + +    C  EQ +    ++     
Sbjct: 248 DQLPVKFAGYSACFRSEAGSAGKDTRGLIRLHQFQKVELVNLCLPEQSYEVLEQLTREAE 307

Query: 413 SIYKDFGFEKIMVKLSTRP----EKRVGSDALWDDAENIMKGV 451
           ++ +        +++ T      + +     +W  A+N  + +
Sbjct: 308 AVLEALQLPYRRIEICTGDLGAKDAKKYDIEVWLPAQNRYREI 350


>gi|218905598|ref|YP_002453432.1| histidyl-tRNA synthetase [Bacillus cereus AH820]
 gi|218536362|gb|ACK88760.1| histidyl-tRNA synthetase [Bacillus cereus AH820]
          Length = 423

 Score = 65.2 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 70/413 (16%), Positives = 139/413 (33%), Gaps = 55/413 (13%)

Query: 275 IFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           ++Q +    R   +  +Y+EI TP        +          ++   +      +  R+
Sbjct: 19  LWQYIEGQAREICRRYNYKEIRTPIF---EHTELFLRGVGDTTDIVQKEMYSFQDRGERS 75

Query: 334 FALKPM-NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
             L+P    P   +   + +      P +L   G ++R E   +     R R F Q    
Sbjct: 76  LTLRPEGTAPVVRSYVENKMFGDATQPTKLYYIGQMFRYERPQA----GRYRQFVQFGIE 131

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKI---MVKLSTRPEKRVGSDALWDDAENIMK 449
              + +   +   ++  L +  Y+  G + I   +  L     ++   DAL    E  + 
Sbjct: 132 AIGSNDPAIDA--EVIALAVEFYRGMGLKNIKVVLNSLGDAASRQAHRDALIAHFEPRIG 189

Query: 450 G---------------VLDTIKNSSQDRINT-----GVLLGEGAFYGPK----------- 478
                           +LD  K+ + + + T       L  + A Y  K           
Sbjct: 190 EFCSDCQSRLEKNPLRILDCKKDRNHELMGTAPSITEYLNEDSAVYYDKVQELLTMMDVP 249

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS--------EKCHPVMIHRAVFGS 530
           FE       G D+   T+    +    F A    S          E   P M       S
Sbjct: 250 FEKDPNLVRGLDYYQHTVFEIMSEAEGFGAITTLSGGGRYNGLVKEIGGPEMPGIGFAMS 309

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
           IER I  + +     LP+    I   V  +   A ++A ++A  L+   L++E D+ +  
Sbjct: 310 IERLIMAL-KAENIELPIE-HSIDCYVVALGEKAKDHAAKVAFDLRKAGLAVEKDYLDRK 367

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  + +     K   + + G+ E  +  I ++   +   ++V+L      + +
Sbjct: 368 MKAQFKSADRLKAKFVAVLGEDELDKGIINLKDMATGEQEEVALDVFASYVAE 420


>gi|241668454|ref|ZP_04756032.1| alanyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254876987|ref|ZP_05249697.1| alanyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254843008|gb|EET21422.1| alanyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 865

 Score = 65.2 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/142 (23%), Positives = 59/142 (41%), Gaps = 10/142 (7%)

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIED-GFYYDFDKEQPFSSDELAQIE 123
           +  R      HS  H++ +A++ +        G +++D    +DF  ++  S  E+ QIE
Sbjct: 544 DSVRLATAANHSATHLLHKALKIVLGSHAEQKGSLVDDNKLRFDFTHDKAISRVEIEQIE 603

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDL 182
             + + I  + P      S EKA+ L          E L      + V +   G++  +L
Sbjct: 604 TLVNQQIRANYPVATIETSQEKAKSLG--------AEALFGEKYGDIVRVISMGDFSIEL 655

Query: 183 CRGPHVRSTGQVKKFFKLMKVA 204
           C G HV  TG +  F  + +  
Sbjct: 656 CGGTHVAYTGDIGLFKIVSESG 677


>gi|307718489|ref|YP_003874021.1| alanyl-tRNA synthetase AlaRS [Spirochaeta thermophila DSM 6192]
 gi|306532214|gb|ADN01748.1| alanyl-tRNA synthetase AlaRS [Spirochaeta thermophila DSM 6192]
          Length = 603

 Score = 65.2 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 58/125 (46%), Gaps = 10/125 (8%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           H+  H++ +A++ +        G  I  +   +DF   +  + +++ ++E+ + + I  D
Sbjct: 459 HTATHLLHQALRIVLGPHVQQKGSNITPERLRFDFSHPEKLTPEQIRKVEEIVNQKIKED 518

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTG 192
            P   + ++ E+A+E         +          E V +Y  G++  ++C GPHV  TG
Sbjct: 519 LPVTMEVMTLEEAKEKGAIAFFTDRY--------DEKVKVYSVGDFSKEVCGGPHVERTG 570

Query: 193 QVKKF 197
            + +F
Sbjct: 571 VLGRF 575


>gi|72382646|ref|YP_292001.1| seryl-tRNA synthetase [Prochlorococcus marinus str. NATL2A]
 gi|123620933|sp|Q46JN0|SYS_PROMT RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|72002496|gb|AAZ58298.1| seryl-tRNA synthetase [Prochlorococcus marinus str. NATL2A]
          Length = 426

 Score = 65.2 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 39/234 (16%), Positives = 87/234 (37%), Gaps = 20/234 (8%)

Query: 220 IYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED----GSGVIFWHRKGWKI 275
           + G      +EL ++   +  +  ++H ++A +++L+          S  +   +   K+
Sbjct: 117 LEGKNEKDNKELRRWGEPISGNTLKEHWEIANQLNLWDSERSSVIAKSRFVTLFKHAAKL 176

Query: 276 FQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
            ++LI++M    IK  Y E+  P +++      SG    +    F     D         
Sbjct: 177 ERSLINFMLDLHIKKGYLEVLPPALVNTASLTGSGQLPKFAEESFRCADDD--------L 228

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDA 391
            L P       ++    +     LP+R   +   +R E         GL+R+  F + + 
Sbjct: 229 WLTPTAEVPITSLHRGEIIPRDLLPLRYVAYSPCFRREAGSYGRDTRGLIRLHQFNKVEL 288

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALW 441
           + F T E+  +   +I +   S+ ++      +++L T              +W
Sbjct: 289 YWFSTPERSEDALEQITSDAESVLQELELPYRVIQLCTGDLGFSAKKTYDLEVW 342


>gi|320539040|ref|ZP_08038714.1| alanyl-tRNA synthetase [Serratia symbiotica str. Tucson]
 gi|320030880|gb|EFW12885.1| alanyl-tRNA synthetase [Serratia symbiotica str. Tucson]
          Length = 875

 Score = 65.2 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 68/162 (41%), Gaps = 11/162 (6%)

Query: 45  GKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGF 104
           GK+   S  V++  ++     + R+   + HS  H++  A++    E     G ++ D +
Sbjct: 535 GKLSQGSLKVKD-RVDAQIDTERRNRIRLNHSATHLLHAALRQTLGEHVAQKGSLVNDKY 593

Query: 105 -YYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE 163
             +DF   +    +++ ++E  + + + R+     + +S + A+E         K     
Sbjct: 594 LRFDFSHYEAMKPEQIRRVEDLVNQQVRRNLLVQTEVMSLDDAKEKGAMALFGEKY---- 649

Query: 164 SIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKFFKLMKVA 204
                +NV +   G++  +LC G H   TG +  F  + +  
Sbjct: 650 ----DDNVRVLTMGDFSTELCGGTHTSRTGDIGLFSIVTESG 687


>gi|312622432|ref|YP_004024045.1| alanyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002]
 gi|312202899|gb|ADQ46226.1| alanyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002]
          Length = 883

 Score = 65.2 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 44/191 (23%), Positives = 81/191 (42%), Gaps = 10/191 (5%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFS 115
            S+     E+ R   +  H+  H++  A++ I  +     G  +  D   +DF   +P S
Sbjct: 546 SSVVAKVDEELRLATMKNHTATHLLHSALRKILGQHAQQSGSQVTPDRLRFDFAHYEPLS 605

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            ++L +IEK +  II +  P  K     + A  +  +     K   +        V + +
Sbjct: 606 EEQLIEIEKMINNIIQQAIPVEKIVTDLDSALRMGATALFDEKYSNV--------VRVIK 657

Query: 176 QGEW-FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
            G++  +LC G HV +TGQ+  F  + + + A           +++YG   NTQQ L Q 
Sbjct: 658 IGDFSMELCGGTHVDNTGQIGMFKIISESSVAAGVRRIEAITGNKVYGFILNTQQTLKQL 717

Query: 235 LYFLEESEKRD 245
              ++ S   +
Sbjct: 718 RSKVKASTDSE 728


>gi|325971945|ref|YP_004248136.1| alanyl-tRNA synthetase [Spirochaeta sp. Buddy]
 gi|324027183|gb|ADY13942.1| alanyl-tRNA synthetase [Spirochaeta sp. Buddy]
          Length = 598

 Score = 65.2 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/134 (22%), Positives = 60/134 (44%), Gaps = 10/134 (7%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEK 124
           D        H+  H++ +A++++  E     G  I  +   +DF    P S++E+ ++E 
Sbjct: 452 DHSDKTTALHTATHMLHQALRTVLGEHVGQKGSNITIERLRFDFTHHSPMSAEEIQKVED 511

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLC 183
            + E I R+     + ++ ++A+          K          E V +Y  G++  ++C
Sbjct: 512 MVNEAIDRNLAVKCETMTLDEAKAQGAIAFFDSKY--------GEQVKVYSIGDYSKEVC 563

Query: 184 RGPHVRSTGQVKKF 197
            GPHV +T Q+  F
Sbjct: 564 GGPHVENTSQMGHF 577


>gi|229086967|ref|ZP_04219124.1| Histidyl-tRNA synthetase 2 [Bacillus cereus Rock3-44]
 gi|228696343|gb|EEL49171.1| Histidyl-tRNA synthetase 2 [Bacillus cereus Rock3-44]
          Length = 423

 Score = 65.2 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 70/420 (16%), Positives = 139/420 (33%), Gaps = 57/420 (13%)

Query: 269 HRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
                +++Q +    R   +  +Y+EI TP        +          ++   +     
Sbjct: 13  LPGSVELWQYIEGQAREICRRYNYKEIRTPIF---EHTELFLRGVGDTTDIVQKEMYSFQ 69

Query: 328 IKDLRTFALKPM-NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
            +  R+  L+P    P   +   + +      P +L   G ++R E   +     R R F
Sbjct: 70  DRGERSLTLRPEGTAPVVRSYVENKMYGDATQPTKLYYIGQMFRYERPQA----GRYRQF 125

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG----------------FEKIMVKLSTR 430
            Q       + +   +   ++  L +  Y+  G                 +     L   
Sbjct: 126 VQFGIEAIGSNDPAIDA--EVIALAVEFYRGMGLKNIKVVLNSLGDAASRQAHREALIAH 183

Query: 431 PEKRVG---SDALWDDAENIMKGVLDTIKNSSQDRIN------TGVLLGEGAFY------ 475
            E R+G   SD      +N ++ +LD  K+   + +N        +     A+Y      
Sbjct: 184 FEPRIGEFCSDCQSRLEKNPLR-ILDCKKDRGHELMNAAPSITEYLNEESTAYYEKVQEL 242

Query: 476 ----GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS--------EKCHPVMI 523
                  FE  L    G D+   T+    +    F A    S          E   P M 
Sbjct: 243 LTMMDVPFEKDLNLVRGLDYYQHTVFEIMSEAEGFGAITTLSGGGRYNGLVQEIGGPEMP 302

Query: 524 HRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIE 583
                 SIER I  + +     LP+    I   V  +   A ++A ++A  L+   LS+E
Sbjct: 303 GIGFAMSIERLIMAL-KAENIELPIE-HSIDCYVVALGEKAKDHAAKVAFDLRKAGLSVE 360

Query: 584 TDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            D+ +  +  + +         + + G+ E  +  I ++   +   ++V+L      + +
Sbjct: 361 KDYLDRKMKAQFKSADRLNAKFVAVLGEDELDKGIINLKSMATGEQEEVALDVFASYVAE 420


>gi|167746982|ref|ZP_02419109.1| hypothetical protein ANACAC_01694 [Anaerostipes caccae DSM 14662]
 gi|167653942|gb|EDR98071.1| hypothetical protein ANACAC_01694 [Anaerostipes caccae DSM 14662]
          Length = 868

 Score = 65.2 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 57/142 (40%), Gaps = 10/142 (7%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFSS 116
            + +   E  R      HS  H++ +A++++        G         +DF    P + 
Sbjct: 538 KVLLNVNERNRRQTEKNHSATHLLQKALRTVLGSHVEQAGSSNNAKHLRFDFTHFSPMTP 597

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
           +E+ ++E  + E IA   P   + +S ++A+          K          + V +   
Sbjct: 598 EEIKKVEHIVNEEIAASLPVETKLMSMDEAKNTGAMALFGEKY--------GDEVRVVSM 649

Query: 177 GEW-FDLCRGPHVRSTGQVKKF 197
           G++  +LC G HV +TG +  F
Sbjct: 650 GDFSVELCGGTHVANTGSITAF 671


>gi|312142431|ref|YP_003993877.1| seryl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
 gi|311903082|gb|ADQ13523.1| seryl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
          Length = 422

 Score = 65.2 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 40/245 (16%), Positives = 89/245 (36%), Gaps = 24/245 (9%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHI---AEDGSGVIFWHRKGW--KI 275
           G+     +E+  +    E   + + H ++  ++D+      A+       +  KG   ++
Sbjct: 114 GSDEEDNKEVRTWGEPPEFDFDFKAHWEIGEDLDILDFEKGAKVTGSRFTFL-KGAAARL 172

Query: 276 FQTLISYMRRKIKDD--YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
            ++L+++M      +  YEE+  P + +      +G    ++ +MF ++  D        
Sbjct: 173 ERSLVNFMLDYHTAEHDYEEVFPPFIANADSMTGTGQLPKFKKDMFKLEGLD-------- 224

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDD 390
           + L P        ++   +   +ELP  L  + + +R E         G++R   F + +
Sbjct: 225 YYLIPTAEVPVTNMYRDQIMEPQELPKYLCAYSACFRAEAGAHGRDTRGIIRQHQFNKVE 284

Query: 391 AHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAEN 446
              F   +  + E  KI      I +  G    +V L T              +W  A  
Sbjct: 285 MVKFVKPDDSYQELEKITADAEDILQQLGLPYRVVTLCTGDLTFSSAKTYDLEVWMPAYE 344

Query: 447 IMKGV 451
             + +
Sbjct: 345 TYREI 349


>gi|323700066|ref|ZP_08111978.1| seryl-tRNA synthetase [Desulfovibrio sp. ND132]
 gi|323459998|gb|EGB15863.1| seryl-tRNA synthetase [Desulfovibrio desulfuricans ND132]
          Length = 425

 Score = 65.2 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 43/342 (12%), Positives = 96/342 (28%), Gaps = 41/342 (11%)

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           + ++E    E  A      K+  + E A +L E        E  + +  +       + +
Sbjct: 41  IGEVESLKAEKNAVGPEIAKRKKAGEDASDLLEKMG--RVAERTKELDRELAEVEKAEQD 98

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           W      P++          +       YW                     E  ++    
Sbjct: 99  WMMSV--PNIPHESVPLGAGEEDNPVLRYWGEKPVMD-------------FEPKEHWEIG 143

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEINT 296
                 D    A+       +              ++ + L   M     +   Y E+  
Sbjct: 144 TALGGLDFECAAKLAGAR-FSISFGWC-------ARLERALAQLMLDTQTERHGYTEVLP 195

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P ++++     +G    +  ++F +        D R F L P        ++   +    
Sbjct: 196 PFMVNRKTMTGTGQLPKFEEDLFKLT-------DEREFYLIPTAEVPLTNIYADEVIPEE 248

Query: 357 ELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           +LPV+       +R+E         GL+R   F + +   F   +  +    ++ +    
Sbjct: 249 KLPVKFCAQTPCFRSEAGSYGKDTKGLIRQHQFYKVEMVNFAHPDHSYEALEEMTHSAER 308

Query: 414 IYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
           I +  G     + L T              +W   +   + +
Sbjct: 309 ILEILGLHYRTIVLCTGDMGFSAAKTYDIEVWLPGQGKYREI 350


>gi|282852800|ref|ZP_06262141.1| serine--tRNA ligase [Lactobacillus gasseri 224-1]
 gi|282555908|gb|EFB61529.1| serine--tRNA ligase [Lactobacillus gasseri 224-1]
          Length = 436

 Score = 65.2 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 76/188 (40%), Gaps = 9/188 (4%)

Query: 272 GWKIFQTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G  + + + ++ +    KD Y E+  P +++    Q +G +  +  +++ +   DD  K 
Sbjct: 170 GALLERAVSNFFLDENTKDGYTEVIPPYLVNDASMQGTGQFPKFTEDVYTIVDNDDPDKP 229

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE---PSGSLHGLMRVRGFT 387
            R   L P      V  F   +   ++LP+ +  F   +R+E         GL+R+  F 
Sbjct: 230 -RDLTLIPTAEVPLVNYFRGKILDAKQLPINVTAFSPAFRSESGSAGRDTRGLIRMHEFR 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +      ++  ++E  K+ +    + +  G    +V LST              +W  
Sbjct: 289 KVEMVKIVDEDSSWDELEKLTHNAEHLLQKLGLPYHVVALSTGDASFTSAKTYDLEVWMP 348

Query: 444 AENIMKGV 451
           A++  + +
Sbjct: 349 AQDKYREI 356


>gi|254168570|ref|ZP_04875413.1| histidyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|289595732|ref|YP_003482428.1| histidyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|197622404|gb|EDY34976.1| histidyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|289533519|gb|ADD07866.1| histidyl-tRNA synthetase [Aciduliprofundum boonei T469]
          Length = 415

 Score = 65.2 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 60/417 (14%), Positives = 122/417 (29%), Gaps = 69/417 (16%)

Query: 274 KIFQTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
            +F  + S  R      + E++TP V    L++               +      K  R 
Sbjct: 21  IVFDKICSVAR---SFGFHEVDTPSVELLDLFRIKS------GEEIVKQTFSFVDKGGRE 71

Query: 334 FALKPMNCPGHVAVFNHGLKSYREL--PVRLAEFGSVYRNE--PSGSLHGLMRVRGFTQD 389
                   P      +  + + ++L  PV+   F  ++R E   SG      R+R F Q 
Sbjct: 72  I----TLIPELTPSVSRMIAARKDLIKPVKWFSFPKMWRYEEPQSG------RLREFYQF 121

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFG-----FEKIMVKLSTRPEKRVGSDALWDDA 444
           +A +F       +   ++  L + I    G       K   ++      R  +    ++A
Sbjct: 122 NADIFGVANITADA--EVMALAMEILDSLGLKGKYVMKFSDRILMEELLRSLNIEKIEEA 179

Query: 445 ------------ENIMKGVLDTIKNSSQDRINT---------GVLLGEGAF--------- 474
                       E   + +L      + D + +          +L     F         
Sbjct: 180 FRIIDKKDKIPEERFYEEMLKITSEENVDSLISLLKLSGDVDTILSKFEHFERSEILASL 239

Query: 475 ------YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
                 YG      L    G  +  G +    +    F A       ++   +   +   
Sbjct: 240 KDLLKAYGKTATLDLSIVRGLAYYTGVVFEVHDANGEFRAVLGGGRYDRVVELFGAQPTP 299

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQAI--VTTITSSAVEYAQEIANLLKSHHLSIETDF 586
                    ++E       +W      +     I     + A EIA  L+     ++ D 
Sbjct: 300 AVGFGMGDAVLELLMRREGVWPEEKIEVDYFIAIIPGFRKEAIEIAMELRRSGCVVDIDL 359

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              +I  +++          II G+ E     + ++   S   + V + +   ++ K
Sbjct: 360 SRRSIGKQLKYAHRINAKYTIIVGE-EIKNGEVALKDMESGEQRNVKIGELKEVIEK 415


>gi|189426285|ref|YP_001953462.1| seryl-tRNA synthetase [Geobacter lovleyi SZ]
 gi|238692147|sp|B3EAQ9|SYS_GEOLS RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|189422544|gb|ACD96942.1| seryl-tRNA synthetase [Geobacter lovleyi SZ]
          Length = 423

 Score = 65.2 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/251 (12%), Positives = 79/251 (31%), Gaps = 25/251 (9%)

Query: 210 GDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWH 269
                 ++ R +G+      E   +    E+ +  D  +  +           +      
Sbjct: 114 KSEEENVIVRSWGSLPEMAFEPKPHWDLAEDLDILDFERATKITGARFCLSKRA------ 167

Query: 270 RKGWKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
             G ++ + LIS+M      +  Y E+  P ++++     +G    +  ++F +      
Sbjct: 168 --GARLERALISFMLDLHSTEHGYTEVLPPFMVNRASMTGTGQLPKFEEDLFRLMDP--- 222

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVR 384
                 + L P        +    +    +LP+    +   +R E         GL+R  
Sbjct: 223 -----EYFLIPTAEVPVTNIHRDEILKKSDLPISYTAYTPCFRREAGSYGKDTRGLIRQH 277

Query: 385 GFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDAL 440
            F + +   F   ++   E  K+      + +       ++ L +              +
Sbjct: 278 QFNKVELVKFVHPDESQAELEKLTGHAEKVLQLLELPYRVMALCSGDIGFSACKTYDLEV 337

Query: 441 WDDAENIMKGV 451
           W  ++N  + +
Sbjct: 338 WLPSQNTYREI 348


>gi|285017964|ref|YP_003375675.1| alanyl-tRNA synthetase (alanine--tRNA ligase) protein [Xanthomonas
           albilineans GPE PC73]
 gi|283473182|emb|CBA15688.1| probable alanyl-trna synthetase (alanine--trna ligase) protein
           [Xanthomonas albilineans]
          Length = 883

 Score = 65.2 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 69/170 (40%), Gaps = 18/170 (10%)

Query: 42  AINGKVCDLSDPVREGSIEI-------ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
              G+       + EG+++I       +  E  R+  ++ HS  H++  A++ +      
Sbjct: 532 KFAGQFHGHVGTLIEGTLKIGDVLAGQVDAERRRA-TILNHSATHLLHAALREVLGTHVH 590

Query: 95  AIGP-IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESK 153
             G  +  D   +DF   QP ++ ELA IE+K+ + +  +       +  ++A +     
Sbjct: 591 QKGSLVAPDRLRFDFSHFQPIAAKELALIERKVNQQVRANHAVEVHQMGMQEALDFGAMA 650

Query: 154 KEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKFFKLMK 202
               K          E V + + G++  +LC G HV  TG +  F    +
Sbjct: 651 LFGEKY--------GERVRVLKMGDYSTELCGGTHVTRTGDIGLFKVTSE 692


>gi|217967411|ref|YP_002352917.1| alanyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
 gi|217336510|gb|ACK42303.1| alanyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
          Length = 865

 Score = 65.2 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 51/124 (41%), Gaps = 1/124 (0%)

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGF-YYDFDKEQPFSSDELAQ 121
             ++ R   +  H+  H++  A++       +  G ++   F  +DF    P + ++L  
Sbjct: 545 VDKEKRYHTMRHHTATHLLHAALREYLGTHVMQSGSLVSPEFLRFDFTHHSPLTYEDLKI 604

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           IE+K+ E I  +    K + + E+A+ +        K +    I    NV++   G    
Sbjct: 605 IERKVNENILANHKVEKFWTNLEEAKRMGAIALFTEKYQKNVRIIKINNVSMELCGGTHV 664

Query: 182 LCRG 185
            C G
Sbjct: 665 DCTG 668


>gi|224540623|ref|ZP_03681162.1| hypothetical protein BACCELL_05537 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224517762|gb|EEF86867.1| hypothetical protein BACCELL_05537 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 454

 Score = 65.2 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/202 (13%), Positives = 67/202 (33%), Gaps = 15/202 (7%)

Query: 442 DDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFN 501
           +++E I+K  L      ++  ++  +  G   + G  FE    D        G      N
Sbjct: 268 EESEFILKT-LSAFGLKNELELDLTLARGLNYYTGAIFEVKALDVQIGSITGGGR--YDN 324

Query: 502 LPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT 561
           L   F    V+              +    +R   ++           ++  Q +     
Sbjct: 325 LTGVFGMAGVSGVG-----------ISFGADRIFDVL-NQLDLYPKEAVNSTQLLFINFG 372

Query: 562 SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
                ++  +   +++  +  E    +  +  ++   + K IP + + G+ E +E  + +
Sbjct: 373 EKEAAFSLNVLAQVRAEGIRAEIFPDSSKMKKQMGYANAKNIPFVALVGENEMNENKVTL 432

Query: 622 RRFGSTTTQKVSLLDAIPILTK 643
           +   +     VS  + I  L K
Sbjct: 433 KNMETGEQTLVSAEELIQTLKK 454


>gi|91216110|ref|ZP_01253078.1| seryl-tRNA synthetase [Psychroflexus torquis ATCC 700755]
 gi|91185627|gb|EAS72002.1| seryl-tRNA synthetase [Psychroflexus torquis ATCC 700755]
          Length = 423

 Score = 65.2 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 73/192 (38%), Gaps = 16/192 (8%)

Query: 245 DHRKLAREMDLFHIA----EDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQV 299
            H +LA++ D+          G+G   +  KG ++ + LISY + +  +  Y E+  P +
Sbjct: 142 PHWELAKKYDIIDFELGNKITGAGFPVYKGKGARLQRALISYFLDKNTEAGYNEVQVPLL 201

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           +++           Y       K             L P +      ++   L ++++LP
Sbjct: 202 VNE--------ASGYGTGQLPDKEGQMYHVGNDDLYLIPTSEVPLTNIYRDDLLNFKDLP 253

Query: 360 VRLAEFGSVYRNEPSG---SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ++L  +   +R E       + GL R+  F + +       +  +     +   I +I +
Sbjct: 254 IQLTAYTPCFRREAGSYGAHVRGLNRLHQFDKVELVNLVKPDDSYQVLDTMVEHIKTILR 313

Query: 417 DFGFEKIMVKLS 428
           +      +++L 
Sbjct: 314 ELKLPYRILRLC 325


>gi|260773533|ref|ZP_05882449.1| alanyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
 gi|260612672|gb|EEX37875.1| alanyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
          Length = 860

 Score = 65.2 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 57/143 (39%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFS 115
             +E +  E  R+   + HS  H++  A++ +  E     G ++  +   +DF   +  +
Sbjct: 545 DHVEALVDEKRRNAISLNHSATHLLHAALRQVLGEHVTQKGSLVRAENLRFDFSHLEAMT 604

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           + E+ Q+E+ +   I  +       +  E A++         K          E V +  
Sbjct: 605 AAEIKQVERLVNAQIRLNHVIETHVMDIESAKQKGAMALFGEKY--------DEQVRVLS 656

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G++  +LC G H   TG +  F
Sbjct: 657 MGDFSTELCGGIHASHTGDIGLF 679


>gi|156741477|ref|YP_001431606.1| seryl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
 gi|189083582|sp|A7NJB8|SYS_ROSCS RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|156232805|gb|ABU57588.1| seryl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
          Length = 424

 Score = 65.2 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 37/212 (17%), Positives = 74/212 (34%), Gaps = 20/212 (9%)

Query: 242 EKRDHRKLAREMDLFHIAE--DGSGVIFWHRKG--WKIFQTLISYMRR-KIKDDYEEINT 296
             + H +L   +D+         SG  F+  KG   ++ + LI +M    I+  Y E+ T
Sbjct: 135 APKPHWELGEALDIIDFERGVKLSGSRFYVLKGLGARLQRALIQWMLDLHIQQGYHEVYT 194

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P V+ +     +     +R N++                L P        +    +    
Sbjct: 195 PFVVKEQCMWGARQLPKFRDNLYR--------DVEDDLWLVPTAEVPVTNLHRDEILEAD 246

Query: 357 ELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           +LP+R   +   +R E       + G+ R   F + + ++F   +  ++E  K+     +
Sbjct: 247 QLPLRYCAYTPCFRREKMSAGRDVRGIKRGHQFDKVEMYMFVHPDTSYDELEKLRADAEA 306

Query: 414 IYKDFGFEKIMVKLSTRP----EKRVGSDALW 441
             +  G      +L T        R     +W
Sbjct: 307 TCRLLGLTFRTKELCTGDLGFAATRTYDIEVW 338


>gi|157369929|ref|YP_001477918.1| seryl-tRNA synthetase [Serratia proteamaculans 568]
 gi|166987317|sp|A8GCF0|SYS_SERP5 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|157321693|gb|ABV40790.1| seryl-tRNA synthetase [Serratia proteamaculans 568]
          Length = 430

 Score = 65.2 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 25/188 (13%), Positives = 62/188 (32%), Gaps = 10/188 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M     +   Y+E   P +++      +G    +  ++F  K  ++   D
Sbjct: 170 ARMHRALSQFMLDLHTEQHGYQETYVPYLVNHATLFGTGQLPKFGEDLFHTKPLEEE-SD 228

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
              +AL P        +    +     LP+++      +R E         GL+R+  F 
Sbjct: 229 SSNYALIPTAEVPLTNLVRDEILEEESLPLKMTAHTPCFRAEAGSYGRDTRGLIRMHQFD 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK----RVGSDALWDD 443
           + +       E       ++      + +        + L T        +     +W  
Sbjct: 289 KVEMVQIVRPEDSMTTLEELTGHAEKVLQLLNLPYRKMLLCTGDMGAGSCKTYDLEVWLP 348

Query: 444 AENIMKGV 451
           A++  + +
Sbjct: 349 AQDTYREI 356


>gi|304316701|ref|YP_003851846.1| histidyl-tRNA synthetase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302778203|gb|ADL68762.1| histidyl-tRNA synthetase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 417

 Score = 65.2 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 64/406 (15%), Positives = 127/406 (31%), Gaps = 50/406 (12%)

Query: 276 FQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           +  + + +R    +  ++EI TP        +          ++   +      K  R+ 
Sbjct: 20  WHYVENIIREICDNFGFKEIRTPGF---EHTELFLRGVGESTDIVRKEMYTFNDKGGRSI 76

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE--PSGSLHGLMRVRGFTQDDAH 392
            LKP      V  F         +PV+L     VYR E   SG L    +  G     AH
Sbjct: 77  TLKPEGTSPAVRAFVEHNLYAEAMPVKLYYITPVYRYERPQSGRLREHHQF-GIEMFGAH 135

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN------ 446
                 ++ +  + +   +     +     I      R   +   + L ++ E       
Sbjct: 136 DASADAEVISVAMTLFKRLGLNNLELNINSIGCPNCRREYNKALKEFLGENIEKLCDDCK 195

Query: 447 --------------------IMKGV-------LDTIKNSSQDRINTGVLLGEGAFYGPKF 479
                               I+K          D  K   ++  +     G      PK 
Sbjct: 196 ERYKINPMRVLDCKVESCKRILKDAPLMLNYLCDDCKEHFENLQSYLKEAGFNFVINPKI 255

Query: 480 ----EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
               +Y  K A          Q       R++        E   P +        IER +
Sbjct: 256 VRGLDYYTKTAFEIISNDIGAQGTVCGGGRYDGLV----EECGGPSIPGVGFGMGIERLL 311

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            + +EN    +PL        + T+   A +YA  +A  L++  LS+E D    ++  ++
Sbjct: 312 -LTLENSGIEIPL-PKRTDLFICTVGDDAKKYAFSMALRLRNSGLSVEVDNMGRSLKAQM 369

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           +  +   +   II G+ E   + + ++   +    ++ + +    +
Sbjct: 370 KYANKLNVRYTIILGEDELKNKVVRLKNMDNGEEIEIDIDNVCDKI 415


>gi|281426201|ref|ZP_06257114.1| glycine--tRNA ligase [Prevotella oris F0302]
 gi|299141865|ref|ZP_07035000.1| glycine--tRNA ligase [Prevotella oris C735]
 gi|281399777|gb|EFB30608.1| glycine--tRNA ligase [Prevotella oris F0302]
 gi|298576716|gb|EFI48587.1| glycine--tRNA ligase [Prevotella oris C735]
          Length = 517

 Score = 65.2 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 58/385 (15%), Positives = 119/385 (30%), Gaps = 61/385 (15%)

Query: 276 FQTLISYMRRKIKDDYE----EINTPQVLDQ---HLWQQSGHWDSYRA-NMFAVKCADDT 327
           +Q     +  +  +  +    E     +LD+        + +W   R  N+         
Sbjct: 146 YQKKRDALHERYTEAMQGPDLEALKQIILDEGIVDPISGTKNWTDVRQFNLMFSTEVGSL 205

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
                   L+P    G    + +  K+   +LP  + + G  +RNE   +   + R+R F
Sbjct: 206 SDQTNRIYLRPETAQGIFVNYLNVQKTGRMKLPFGICQIGKAFRNEIV-ARQFVFRMREF 264

Query: 387 TQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
            Q +   FC    E  + E  K H +        G E        +           + A
Sbjct: 265 EQMEMQFFCQPGTEMKWFEYWKKHRMAWHQALGMGKENYRFHDHEKLAHYA------NAA 318

Query: 445 ENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPS 504
            +I            +  +  G    EG      F+               +        
Sbjct: 319 TDI------------EFHMPFGFKEVEGIHSRTDFD---------------LSQHEKFSG 351

Query: 505 RFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK------------GNLPLWLSP 552
           R   ++    +E   P  +  ++ G    F+ ++  ++               LP  L+P
Sbjct: 352 RSIKYFDPEKNESYTPYDVETSI-GVDRMFLSVLCHSYTEEKLENGETRIVLRLPEALAP 410

Query: 553 IQAIVTTITSSAV--EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           ++  V  +       E AQ+I + LK H  +   D ++ +I  + R       P  +   
Sbjct: 411 VKCAVFPLDKKDGLPELAQQIVDDLKFHFNTHYGDPKD-SIGKRYRRQDAVGTPFCVTVD 469

Query: 611 DKEASERSIGIRRFGSTTTQKVSLL 635
                +  + +R   +   ++V + 
Sbjct: 470 HDTPKDHKVTLRYRDTMKQERVDIN 494


>gi|227872332|ref|ZP_03990686.1| possible alanine--tRNA ligase [Oribacterium sinus F0268]
 gi|227841815|gb|EEJ52091.1| possible alanine--tRNA ligase [Oribacterium sinus F0268]
          Length = 536

 Score = 65.2 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 61/143 (42%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFS 115
            S+ ++     R+L    H+  H++ +A++          G   +D    +DF      +
Sbjct: 207 DSVRLVVDAKKRALTARNHTATHLLQKALKETLGSHVEQAGAYYDDKRLRFDFTHFTALT 266

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            +EL ++E  + E IAR    L + +  E+A++   +     K          + V +  
Sbjct: 267 KEELEKVENLVNEEIARADVVLTREMPIEEAKKSGATALFGEKY--------GDTVRVVS 318

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G++  +LC G HV ++  ++ F
Sbjct: 319 VGDFSIELCGGTHVENSSSIQAF 341


>gi|238855568|ref|ZP_04645871.1| serine--tRNA ligase [Lactobacillus jensenii 269-3]
 gi|260665157|ref|ZP_05866007.1| seryl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
 gi|282932346|ref|ZP_06337781.1| serine--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|238831852|gb|EEQ24186.1| serine--tRNA ligase [Lactobacillus jensenii 269-3]
 gi|260561211|gb|EEX27185.1| seryl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
 gi|281303567|gb|EFA95734.1| serine--tRNA ligase [Lactobacillus jensenii 208-1]
          Length = 435

 Score = 65.2 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 54/354 (15%), Positives = 121/354 (34%), Gaps = 41/354 (11%)

Query: 108 FDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKV--EILESI 165
            D+++     E   ++ K  E+    +   +   + + A +      E  K   E +  +
Sbjct: 34  IDEKRRAKLSETEALKAKRNEVSKEIAAKKRNKENADDAIKAMREVGEQIKKLDEEVAEL 93

Query: 166 PAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAW 225
             K+N  L R   + D    P        ++  K  +     +                 
Sbjct: 94  TEKQNYILLRLPNFPDDS-DPIGPDESYNQEVRKWNEPTKFNF----------------- 135

Query: 226 NTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISY-MR 284
               E   +    ++    D    A+      +   G+        G  + + + ++ + 
Sbjct: 136 ----EPKAHWDLGDDLHILDFDTAAKVSGARFVYYKGA--------GALLERAVYNFFLD 183

Query: 285 RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
              K+ Y E+  P +++    Q +G +  +  +++ +   DD  K L    L P      
Sbjct: 184 ENTKEGYTEVIPPYLVNDDSMQGTGQFPKFTEDVYTIVDNDDPDKPL-NLTLIPTAEVPL 242

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMF 401
           V  F   +   ++LP+ +      +R+E   +     GL+R+  F + +    C  E+ +
Sbjct: 243 VNYFRGDIVDGKKLPINVTALTPAFRSEAGSAGRDTRGLIRMHQFNKVEMVKVCKPEESW 302

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
           NE  ++ +    + +  G    +V LST              +W  A+N  + +
Sbjct: 303 NELDRLTHNAEHLLQKLGLPYHVVALSTGDASFTSAKTYDLEVWMPAQNKYREI 356


>gi|327475192|gb|AEA77191.1| seryl-tRNA synthetase [Bacillus sp. 15.4]
          Length = 426

 Score = 65.2 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 35/223 (15%), Positives = 78/223 (34%), Gaps = 21/223 (9%)

Query: 242 EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEIN 295
           E + H  LA +  +          GS  +F+   G ++ + LI++M     D   YEE+ 
Sbjct: 136 EPKPHWDLATDSGILDFERASKVTGSRFVFYKGLGARLERALINFMMDLHMDEHGYEEML 195

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
            P ++++     +G    +  + F +        +   + L P             + + 
Sbjct: 196 PPYIVNRESMTGTGQLPKFEEDAFLI--------ESEDYYLVPTAEVPVTNYHRDEILTN 247

Query: 356 RELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
            +LP+    F + +R+E   +     GL+R   F + +   F   E  + E  K+     
Sbjct: 248 DQLPIAYTAFSACFRSEAGSAGRDTRGLIRQHQFNKVELVRFVRPEDSYTELEKLTGHAE 307

Query: 413 SIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENIMKGV 451
            + +       ++ + T              +W  +    + +
Sbjct: 308 KVLQLLNLPYRVMSMCTADLGFTAAKKYDIEVWIPSYRTYREI 350


>gi|309799303|ref|ZP_07693550.1| histidyl-tRNA synthetase [Streptococcus infantis SK1302]
 gi|308117081|gb|EFO54510.1| histidyl-tRNA synthetase [Streptococcus infantis SK1302]
          Length = 426

 Score = 65.2 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 56/407 (13%), Positives = 126/407 (30%), Gaps = 62/407 (15%)

Query: 276 FQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           +Q +  + R   K  +Y E+ TP       ++          ++   +  D   K  R  
Sbjct: 20  WQYVEGFAREIFKRYNYAEVRTPIF---EHYEVISRSVGDTTDIVTKEMYDFYDKGDRHI 76

Query: 335 ALKPMNCPGHVAVFNHGLKS-----YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQ- 388
            L+P    G   V    +++       + P +    G ++R E   +     R+R F Q 
Sbjct: 77  TLRP---EGTAPVVRSYVENKLFAPEVQKPSKFYYMGPMFRYERPQA----GRLRQFHQI 129

Query: 389 --------DDAHVFCTKEQMFNECLKIHNLIISIY-KDFGFEKIMVKLSTRPEKRVG--S 437
                   + A    T     +   +I    + ++    G  +            +    
Sbjct: 130 GVECFGSSNPATDVETIAMAAHFLKEIGIQGVKLHLNTLGNPESRAAYRQALIDYLTPLK 189

Query: 438 DALWDDAENIMKG----VLDTIKNSSQDR-------INTGVLLGEGAFYGPKFEYILKDA 486
           D+L  D++  ++     VLD+ +   +         ++      +  F   +    + + 
Sbjct: 190 DSLSKDSQRRLEENPLRVLDSKEKEDKVAVENAPSILDYLDAESQAHFDAVR---QMLEN 246

Query: 487 IGRDWQCGT---IQVDFNLPSRFNAFYVNSHSE---------------KCHPVMIHRAVF 528
           +G  +   T     +D+   + F        +E                  P        
Sbjct: 247 LGVAYIIDTNMVRGLDYYNHTIFEFITEIEDNELTVCAGGRYDGLVAYFGGPETAGFGFG 306

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRN 588
             +ER + ++    +G      + +   +  +   A   A E+   L+      E D+ N
Sbjct: 307 LGVERLLLVL--EKQGVALPIENALDVYIAVLGEGANVKALELVQALRQQGFKAERDYLN 364

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
             +  + +   +     II  G+ E     + ++   +    +VSL 
Sbjct: 365 RKLKAQFKSADVFAAKAIITLGESEVESGQVTVKNNQTREEVQVSLE 411


>gi|157691302|ref|YP_001485764.1| seryl-tRNA synthetase [Bacillus pumilus SAFR-032]
 gi|166987310|sp|A8FAD7|SYS_BACP2 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|157680060|gb|ABV61204.1| serine--tRNA ligase [Bacillus pumilus SAFR-032]
          Length = 424

 Score = 65.2 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 73/200 (36%), Gaps = 17/200 (8%)

Query: 261 DGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANM 318
            GS  +F+   G ++ + L ++M     D   + E+  P ++++     +G    +  + 
Sbjct: 159 TGSRFVFYKGLGARLERALYNFMLDLHVDEFGFTEVLPPYMVNRASMTGTGQLPKFEEDA 218

Query: 319 FAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS-- 376
           F ++           + L P        +    +    +LP+  A F + +R+E   +  
Sbjct: 219 FKIR--------EEDYFLIPTAEVPITNMHRDEIIEGEQLPINYAAFSACFRSEAGSAGR 270

Query: 377 -LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
              GL+R   F + +   F   E  + E  K+ N    + +       ++ + T      
Sbjct: 271 DTRGLIRQHQFNKVELVKFVRPEDSYEELEKLTNQAEKVLQLLNLPYRVMSMCTGDLGFT 330

Query: 436 ----GSDALWDDAENIMKGV 451
                   +W  +++  + +
Sbjct: 331 AAKKYDIEVWIPSQDTYREI 350


>gi|27262306|gb|AAN87434.1| Alanyl-tRNA synthetase [Heliobacillus mobilis]
          Length = 883

 Score = 65.2 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 35/157 (22%), Positives = 67/157 (42%), Gaps = 16/157 (10%)

Query: 54  VREGSI---EIITPED---PRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYY 106
           V EG+    E +T E     R      HS  H++  A++ +  E     G  +  D   +
Sbjct: 543 VEEGTFQAGETVTAEVTGLRRQAIARHHSATHLLHRALKDVLGEHVNQAGSLVTGDRLRF 602

Query: 107 DFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIP 166
           DF    P + +E  QIE+ +   + R  P      + ++A+ +  +     K        
Sbjct: 603 DFSHFTPLTREEWKQIEESVNRQVFRSLPVEVFEATLDEAKAMGATALFGEKY------- 655

Query: 167 AKENVTLYRQGEW-FDLCRGPHVRSTGQVKKFFKLMK 202
             ++V + R G++  +LC G H+++T Q+  F  + +
Sbjct: 656 -GDHVRVVRMGDYSMELCGGTHLQNTAQIGLFKLVSE 691


>gi|78044066|ref|YP_361018.1| histidyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901]
 gi|123743144|sp|Q3AA16|SYH_CARHZ RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|77996181|gb|ABB15080.1| histidyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901]
          Length = 423

 Score = 65.2 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 64/427 (14%), Positives = 133/427 (31%), Gaps = 65/427 (15%)

Query: 270 RKGW--------KIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            KG          +++ +    R   +   Y+EI TP      L+++     +       
Sbjct: 6   PKGTNDLFPPEVFLWEEIERKFREVCRRFGYQEIRTPIFEHTELFERGVGETTDIVEKEM 65

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
               D   K  R+  L+P      +  +    K     P +    G ++R +   +    
Sbjct: 66  YTFLD---KAGRSITLRPEGTAAVIRAYVEAKKYADPGPAKYFYIGPMFRYDKPQA---- 118

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            R+R F Q    +  + E M +   ++  + +  Y++ G   + ++        VG    
Sbjct: 119 GRLRQFHQLGVEILGSDEPMVDA--EVILMALEFYREIGLNDVELR-----LNSVGCPEC 171

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDF 500
                  +    +  K    D     +          K E   K A         +  D 
Sbjct: 172 RKSLREKLINYFEERKEELCDLCKARLNRNPLRILDCKNESCQKIAQNAPTPLSELCPDC 231

Query: 501 N---------------------LPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
                                    R   +Y  +  E   P +  ++  G   R+ G++ 
Sbjct: 232 REHFTEVRKYLDLAQVKYVIDPFLVRGLDYYTKTAFEFVVPEIGAQSSIGGGGRYNGLIR 291

Query: 540 ENFKGNLP---LWLSPIQAI------------------VTTITSSAVEYAQEIANLLKSH 578
           E    + P     L   + I                  V  +   A EY   + N L+  
Sbjct: 292 EIGGPDQPGIGFALGEERTILALKRKSEEISVPVPDLFVCLLGEEAREYGFPLINELRRL 351

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
           +L +ETD++ +++  +++  +  K    +I G++E       +R   +    ++S  + I
Sbjct: 352 NLWVETDYQGKSLKAQLKAANRLKAKAALIIGEEELKSGRFILRDLDTGEQVELSRDELI 411

Query: 639 PILTKES 645
               +E 
Sbjct: 412 EKYARER 418


>gi|302336512|ref|YP_003801719.1| seryl-tRNA synthetase [Olsenella uli DSM 7084]
 gi|301320352|gb|ADK68839.1| seryl-tRNA synthetase [Olsenella uli DSM 7084]
          Length = 428

 Score = 65.2 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 36/245 (14%), Positives = 76/245 (31%), Gaps = 22/245 (8%)

Query: 220 IYGTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE--DGSGVIFWH--RKGWK 274
            YG   +   E+  +        + + H  L     +         +G  F+     G +
Sbjct: 115 PYGKDDSDNPEVRAWGEPRRFGFDPKAHWDLGPATGMIDFDRGVKLAGSRFYLLGGMGAR 174

Query: 275 IFQTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           + + LI++ +   ++  ++E   P + +      +G    +  ++F V            
Sbjct: 175 MERALINFFIDMHVRAGFKEWWPPVITNYDSLFGTGQLPKFDEDLFHVSGG--------- 225

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDD 390
             L P        +         +LP+    F   +R E   +     G++RV  F + +
Sbjct: 226 MYLIPTAEVMLTNIHRDETLDASQLPLLYTAFTPCFREEAGSAGRDTRGIIRVHEFDKVE 285

Query: 391 AHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAEN 446
              F   E   ++   +        K  G    +V L T              +W  + N
Sbjct: 286 MVKFAKPEDSMSQLESMVAEAELCLKTLGLPYHVVTLCTGDIGFSACKCYDIEVWLPSYN 345

Query: 447 IMKGV 451
             K +
Sbjct: 346 SYKEI 350


>gi|167949162|ref|ZP_02536236.1| Prolyl-tRNA synthetase [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 121

 Score = 65.2 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 42/110 (38%), Gaps = 9/110 (8%)

Query: 518 CHPVMIHRAVFGS-IERFIGIMIENFKGN----LPLWLSPIQAIVTTI----TSSAVEYA 568
              V++    +G  + R +   IE          P  ++P Q  +  +    ++   E  
Sbjct: 4   GKAVVMTMGCYGIGVSRVVAATIEQHHDEHGISWPASIAPFQVAICPMKLHKSARVREPV 63

Query: 569 QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERS 618
           +++   L++  + +  D R+    +   +  +  IP  ++ G++   +  
Sbjct: 64  EQLYTELQALGIEVLLDDRDVRPGFMFADMELIGIPHRVVIGERSLDQGQ 113


>gi|206969773|ref|ZP_03230727.1| histidyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|206735461|gb|EDZ52629.1| histidyl-tRNA synthetase [Bacillus cereus AH1134]
          Length = 423

 Score = 65.2 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 69/413 (16%), Positives = 138/413 (33%), Gaps = 55/413 (13%)

Query: 275 IFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           ++Q +    R   +  +Y+EI TP        +          ++   +      +  R+
Sbjct: 19  LWQYIEGQAREICRRYNYKEIRTPIF---EHTELFLRGVGDTTDIVQKEMYSFQDRGERS 75

Query: 334 FALKPM-NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
             L+P    P   +   + +      P +L   G ++R E   +     R R F Q    
Sbjct: 76  LTLRPEGTAPVVRSYVENKMFGDATQPTKLYYIGQMFRYERPQA----GRYRQFVQFGIE 131

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIM--------------VKLSTRPEKRVGSD 438
              + +   +   ++  L +  Y+  G + I                + +         D
Sbjct: 132 AIGSNDPAIDA--EVIALAVEFYRGMGLKNIKVVLNSLGDAASRQAHRDALIAHFEPRID 189

Query: 439 ALWDDAENIMKG----VLDTIKNSSQDRINT-----GVLLGEGAFYGPK----------- 478
               D ++ ++     +LD  K+ + + + T       L  + A Y  K           
Sbjct: 190 EFCSDCQSRLEKNPLRILDCKKDRNHELMGTAPSITEYLNEDSAVYYEKVQELLTMMDVP 249

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS--------EKCHPVMIHRAVFGS 530
           FE       G D+   T+    +    F A    S          E   P M       S
Sbjct: 250 FEKDPNLVRGLDYYQHTVFEIMSEADGFGAITTLSGGGRYNGLVQEIGGPEMPGIGFAMS 309

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
           IER I  + +     LPL    I   V  +   A ++A ++A  L+   LS+E D+ +  
Sbjct: 310 IERLIMAL-KAENIELPLE-HSIDCYVVALGEKAKDHAAKVAFDLRKAGLSVEKDYLDRK 367

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  + +     K   + + G+ E  +  I ++   +   ++V+L      + +
Sbjct: 368 MKAQFKSADRLKAKFVAVLGEDELDKGIINLKDMATGEQEEVALDVFASYVAE 420


>gi|126697580|ref|YP_001086477.1| seryl-tRNA synthetase [Clostridium difficile 630]
 gi|255099171|ref|ZP_05328148.1| seryl-tRNA synthetase [Clostridium difficile QCD-63q42]
 gi|255304951|ref|ZP_05349125.1| seryl-tRNA synthetase [Clostridium difficile ATCC 43255]
 gi|115249017|emb|CAJ66828.1| Seryl-tRNA synthetase 1 [Clostridium difficile]
          Length = 423

 Score = 65.2 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 47/356 (13%), Positives = 114/356 (32%), Gaps = 35/356 (9%)

Query: 105 YYDFDKEQPFSSDELAQIEKKMQEIIARDSPFL----KQYLSHEKARELFESKKEAYKVE 160
             D  + +    D    +E++ +     D+       ++ +  E      E    + K+ 
Sbjct: 1   MLDIKRIRENLDDIKKAMERRGEREFDLDAVVELDNKRREILQEVEVMKNELNVNSKKIP 60

Query: 161 ILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRI 220
            L            R  E  D  +G        + +  K ++    Y            +
Sbjct: 61  QLIKEGKDVTEEKARLKELSDKIKG--------IDEKVKEVEAKMEYTLMRIPNVPHPEV 112

Query: 221 -YGTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWK 274
             G       ++  +    +   E + H  +   + +          GS    +   G +
Sbjct: 113 PQGETDEDNVQIRTWGEPTKFDFEHKAHWDIGTGLGILDFERAGKITGSRFTLYRGLGAR 172

Query: 275 IFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           + ++L+++          Y E+  P + +++ +  +G    +  +MF +        +  
Sbjct: 173 LERSLMNFFLNTHTAKHGYTEVLPPFMANRNSFIGTGQLPKFEEDMFKI--------EGL 224

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQD 389
            + L P        +  + +    ELP++   +   +R+E   +     GL+R   F + 
Sbjct: 225 EYFLIPTAEVPVTNIHANEILDVAELPIKYCAYTPCFRSEAGSAGRDTRGLVRQHQFNKV 284

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALW 441
           +   F   E  +NE   + +   ++ +  G    +VK+ T              +W
Sbjct: 285 ELVKFVKPEDSYNELESLTHDAETMLQMLGLPYRVVKICTGDLGFTAAFKYDLEVW 340


>gi|327463740|gb|EGF10056.1| histidine--tRNA ligase [Streptococcus sanguinis SK1057]
          Length = 426

 Score = 65.2 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 64/411 (15%), Positives = 130/411 (31%), Gaps = 68/411 (16%)

Query: 276 FQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           +Q +  + R+  K  +Y EI TP       ++          ++   +  D   K  R  
Sbjct: 20  WQYVEDFARKTFKKYNYGEIRTPIF---EHYEVISRSVGDTTDIVTKEMYDFYDKGDRHI 76

Query: 335 ALKPMNCPGHVAVFNHGLKS-----YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
            L+P    G   V    +++       + PV++   GS++R E   +     R+R F Q 
Sbjct: 77  TLRP---EGTAPVVRSYVENKLFAPEVQKPVKVYYMGSMFRYERPQA----GRLREFHQI 129

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKD------------FGFEKIMVKLSTRPEKRVG- 436
            A  F +        +++  +    +KD             G  +            +  
Sbjct: 130 GAECFGSSNPA--TDVEMIAMAAQFFKDIGITNVSLELNSLGNPESRAAYRRALIDYLTP 187

Query: 437 -----SDALWDDAENIMKGVLDTIKNSSQDRIN-----TGVLLGEGAFYGPKFEYILKD- 485
                S       E     VLD+ +   +  +         L  E + Y      +L+  
Sbjct: 188 LKASLSADSQRRLEENPLRVLDSKEPEDKAAVEGAPSILDYLDEESSTYFAAVRSMLETL 247

Query: 486 ----------AIGRDWQCGTI----------QVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
                       G D+   TI          Q+      R++         +   V    
Sbjct: 248 QIPYVINTNMVRGLDYYNHTIFEFTTEVAGSQLTICAGGRYDGLVAYFGGPETPGVGFGM 307

Query: 526 AVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD 585
            +    ER + ++  + +G      + +   V  + + A   A E+   L++   + E D
Sbjct: 308 GL----ERLLLVL--DKQGVDLPIETALDVYVAVLGTGANGRALELVQALRAQGFAAERD 361

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
           + +  +  + +   I K   +I  G+ E     + ++   +     VSL  
Sbjct: 362 YLDRKLKAQFKSADIFKAKTLITLGESEVESGQVTVKNNYNREEITVSLDQ 412


>gi|212692033|ref|ZP_03300161.1| hypothetical protein BACDOR_01528 [Bacteroides dorei DSM 17855]
 gi|237724685|ref|ZP_04555166.1| seryl-tRNA synthetase [Bacteroides sp. D4]
 gi|265755598|ref|ZP_06090219.1| seryl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
 gi|212665425|gb|EEB25997.1| hypothetical protein BACDOR_01528 [Bacteroides dorei DSM 17855]
 gi|229436880|gb|EEO46957.1| seryl-tRNA synthetase [Bacteroides dorei 5_1_36/D4]
 gi|263234204|gb|EEZ19797.1| seryl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
          Length = 424

 Score = 65.2 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 70/198 (35%), Gaps = 16/198 (8%)

Query: 245 DHRKLAREMDLFHIA----EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQV 299
            H +LA++ DL          G+G   +  KG ++ + LI++   + +   YEEI  P V
Sbjct: 143 PHWELAKKYDLIDFDLGVKITGAGFPVYKGKGARLQRALINFFLDEARASGYEEIMPPTV 202

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           ++            Y       K       ++    L P        ++   +   ++LP
Sbjct: 203 VNT--------ASGYGTGQLPDKEGQMYHCEVDDLYLIPTAEVPVTNIYRDVILDEKQLP 254

Query: 360 VRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ++   +   +R E       + GL R+  F++ +       E       ++ + +  + K
Sbjct: 255 IKNCAYTQCFRREAGSYGKDVRGLNRLHEFSKVELVRIDKPEHSKQSHQEMLDHVEGLLK 314

Query: 417 DFGFEKIMVKLSTRPEKR 434
                  +++L       
Sbjct: 315 KLELPYRILRLCGGDMSF 332


>gi|146311074|ref|YP_001176148.1| seryl-tRNA synthetase [Enterobacter sp. 638]
 gi|166987313|sp|A4W8R7|SYS_ENT38 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|145317950|gb|ABP60097.1| seryl-tRNA synthetase [Enterobacter sp. 638]
          Length = 430

 Score = 65.2 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 63/188 (33%), Gaps = 10/188 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
             + + L  +M     +   Y E   P +++      +G    +  ++F  +  D+   +
Sbjct: 170 AHLHRALAQFMLDLHTEQHGYSETYVPYLVNHDTLYGTGQLPKFAGDLFHTRPLDEEA-E 228

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
              +AL P        +    +    +LP++L      +R+E         GL+R+  F 
Sbjct: 229 SSNYALIPTAEVPLTNLVRDEIIDEDDLPIKLTAHSPCFRSEAGSYGRDTRGLIRMHQFD 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E   +   ++      + +  G     + L T              +W  
Sbjct: 289 KVEMVQIVRPEVSMDALEEMTGHAEKVLELLGLPYRRMALCTGDMGFGATKTFDLEVWVP 348

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 349 AQNTYREI 356


>gi|57234640|ref|YP_181319.1| seryl-tRNA synthetase [Dehalococcoides ethenogenes 195]
 gi|123618838|sp|Q3Z8Y0|SYS_DEHE1 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|57225088|gb|AAW40145.1| seryl-tRNA synthetase [Dehalococcoides ethenogenes 195]
          Length = 413

 Score = 65.2 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 37/210 (17%), Positives = 74/210 (35%), Gaps = 18/210 (8%)

Query: 242 EKRDHRKLAREMDLFHIAE--DGSGVIFWHRKG--WKIFQTLISYMRRKIKD--DYEEIN 295
             + H +L   +D+         SG  F+  KG   ++ + LI++M         Y EI 
Sbjct: 126 TPKPHWELGEALDIIDFDRGIKLSGSRFYILKGEGARLQRALIAFMLDLHTRKHGYTEIY 185

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
            P ++ +     SG+   +  N++              +   P        +    + S 
Sbjct: 186 PPYMIKRECLVASGNLPKFADNLY--------HDAEEDYWWVPTAEAPLTNLHRDEILSV 237

Query: 356 RELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
            +LP+    + + +R E       + G+ R+  F + + + +C  E  F+E  K+     
Sbjct: 238 EQLPIHYVAYTACFRREKMSAGKDVRGIKRLHQFDKVELYKYCKPEDSFDELEKMVADAE 297

Query: 413 SIYKDFGFEKIMVKLSTRPEKRVGSDALWD 442
            I          +K     +   GS   +D
Sbjct: 298 EIADAL-KIPYRLKQLVTADISFGSAKSYD 326


>gi|205830243|sp|Q1GHA1|SYA_SILST RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
          Length = 883

 Score = 64.8 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 32/135 (23%), Positives = 59/135 (43%), Gaps = 5/135 (3%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDELAQIEKKM 126
           RS     HS  H++ EA+++   +     G     D   +DF   +  S+++L++I  ++
Sbjct: 555 RSQIRANHSATHLLHEALRNALGDHVAQKGSLNAADRLRFDFSHNKAVSAEDLSKISAEV 614

Query: 127 QEIIARDSPFLKQYLSHEKAREL--FESKKEAYKVEILESIPAKENVTLYRQGE--WFDL 182
            + I ++S    + ++ + AR L       E Y  E+      +        GE    +L
Sbjct: 615 NDFIRQNSAVSTRIMTPDDARALGAQALFGEKYGEEVRVVSMGRAPTGKGADGETYSIEL 674

Query: 183 CRGPHVRSTGQVKKF 197
           C G HV+ TG +  F
Sbjct: 675 CGGTHVKQTGDIGTF 689


>gi|13540985|ref|NP_110673.1| histidyl-tRNA synthetase [Thermoplasma volcanium GSS1]
 gi|32130137|sp|Q97CE6|SYH_THEVO RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|14324369|dbj|BAB59297.1| tRNA synthetase His [Thermoplasma volcanium GSS1]
          Length = 426

 Score = 64.8 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 33/209 (15%), Positives = 78/209 (37%), Gaps = 15/209 (7%)

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
            GS  +   AE +++ + D +K      +     +  G  Y     +   D  G+     
Sbjct: 229 FGSGKVSKAAERLIRTI-DILKEYGVKSVKYDFSIVRGLSYYTGLVFEAYDKSGQFRAIL 287

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQ 554
                 NL   F+   + +              FG  +  I +++++     P   +   
Sbjct: 288 GGGRYDNLAKLFSEQDIPAVG------------FGMGDAVISLLLKSKGVKAPH--AKKS 333

Query: 555 AIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
             V  + +   E    I+ +L+S    +  +  + +++ +++  S +     +I G+++ 
Sbjct: 334 VYVCRVGTVKAERIASISKMLRSSGFIVSAEIMDRSLSSQLKYASYEGCEYAVIAGERDL 393

Query: 615 SERSIGIRRFGSTTTQKVSLLDAIPILTK 643
              S+ +R   +   + V+L D +P L K
Sbjct: 394 ENNSVTVRDLSTGEQEIVTLGDLVPFLEK 422


>gi|99081073|ref|YP_613227.1| alanyl-tRNA synthetase [Ruegeria sp. TM1040]
 gi|99037353|gb|ABF63965.1| alanyl-tRNA synthetase [Ruegeria sp. TM1040]
          Length = 902

 Score = 64.8 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 32/135 (23%), Positives = 59/135 (43%), Gaps = 5/135 (3%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDELAQIEKKM 126
           RS     HS  H++ EA+++   +     G     D   +DF   +  S+++L++I  ++
Sbjct: 574 RSQIRANHSATHLLHEALRNALGDHVAQKGSLNAADRLRFDFSHNKAVSAEDLSKISAEV 633

Query: 127 QEIIARDSPFLKQYLSHEKAREL--FESKKEAYKVEILESIPAKENVTLYRQGE--WFDL 182
            + I ++S    + ++ + AR L       E Y  E+      +        GE    +L
Sbjct: 634 NDFIRQNSAVSTRIMTPDDARALGAQALFGEKYGEEVRVVSMGRAPTGKGADGETYSIEL 693

Query: 183 CRGPHVRSTGQVKKF 197
           C G HV+ TG +  F
Sbjct: 694 CGGTHVKQTGDIGTF 708


>gi|53723541|ref|YP_103004.1| histidyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
 gi|67639883|ref|ZP_00438712.1| histidine--tRNA ligase [Burkholderia mallei GB8 horse 4]
 gi|76811640|ref|YP_333748.1| histidyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
 gi|121598300|ref|YP_993153.1| histidyl-tRNA synthetase [Burkholderia mallei SAVP1]
 gi|124385953|ref|YP_001026072.1| histidyl-tRNA synthetase [Burkholderia mallei NCTC 10229]
 gi|126449975|ref|YP_001080660.1| histidyl-tRNA synthetase [Burkholderia mallei NCTC 10247]
 gi|167002242|ref|ZP_02268032.1| histidine--tRNA ligase [Burkholderia mallei PRL-20]
 gi|167893949|ref|ZP_02481351.1| histidyl-tRNA synthetase [Burkholderia pseudomallei 7894]
 gi|167910640|ref|ZP_02497731.1| histidyl-tRNA synthetase [Burkholderia pseudomallei 112]
 gi|167918669|ref|ZP_02505760.1| histidyl-tRNA synthetase [Burkholderia pseudomallei BCC215]
 gi|217421587|ref|ZP_03453091.1| histidine--tRNA ligase [Burkholderia pseudomallei 576]
 gi|237812548|ref|YP_002896999.1| histidine--tRNA ligase [Burkholderia pseudomallei MSHR346]
 gi|254177586|ref|ZP_04884241.1| histidyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
 gi|254189058|ref|ZP_04895569.1| histidyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
 gi|254199950|ref|ZP_04906316.1| histidyl-tRNA synthetase [Burkholderia mallei FMH]
 gi|254206283|ref|ZP_04912635.1| histidyl-tRNA synthetase [Burkholderia mallei JHU]
 gi|254260769|ref|ZP_04951823.1| histidine--tRNA ligase [Burkholderia pseudomallei 1710a]
 gi|254297428|ref|ZP_04964881.1| histidyl-tRNA synthetase [Burkholderia pseudomallei 406e]
 gi|254358302|ref|ZP_04974575.1| histidyl-tRNA synthetase [Burkholderia mallei 2002721280]
 gi|81685079|sp|Q62JW5|SYH_BURMA RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|123598924|sp|Q3JRQ5|SYH_BURP1 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|166227948|sp|A3MK74|SYH_BURM7 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|166227949|sp|A2S2A3|SYH_BURM9 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|166227950|sp|A1V4K0|SYH_BURMS RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|52426964|gb|AAU47557.1| histidyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
 gi|76581093|gb|ABA50568.1| histidyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
 gi|121227110|gb|ABM49628.1| histidyl-tRNA synthetase [Burkholderia mallei SAVP1]
 gi|124293973|gb|ABN03242.1| histidine--tRNA ligase [Burkholderia mallei NCTC 10229]
 gi|126242845|gb|ABO05938.1| histidine--tRNA ligase [Burkholderia mallei NCTC 10247]
 gi|147749546|gb|EDK56620.1| histidyl-tRNA synthetase [Burkholderia mallei FMH]
 gi|147753726|gb|EDK60791.1| histidyl-tRNA synthetase [Burkholderia mallei JHU]
 gi|148027429|gb|EDK85450.1| histidyl-tRNA synthetase [Burkholderia mallei 2002721280]
 gi|157806820|gb|EDO83990.1| histidyl-tRNA synthetase [Burkholderia pseudomallei 406e]
 gi|157936737|gb|EDO92407.1| histidyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
 gi|160698625|gb|EDP88595.1| histidyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
 gi|217395329|gb|EEC35347.1| histidine--tRNA ligase [Burkholderia pseudomallei 576]
 gi|237505085|gb|ACQ97403.1| histidine--tRNA ligase [Burkholderia pseudomallei MSHR346]
 gi|238520494|gb|EEP83953.1| histidine--tRNA ligase [Burkholderia mallei GB8 horse 4]
 gi|243062059|gb|EES44245.1| histidine--tRNA ligase [Burkholderia mallei PRL-20]
 gi|254219458|gb|EET08842.1| histidine--tRNA ligase [Burkholderia pseudomallei 1710a]
          Length = 446

 Score = 64.8 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 57/403 (14%), Positives = 121/403 (30%), Gaps = 69/403 (17%)

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
             Y+ I TP V    L+ +     +           D    +     L+P N    V   
Sbjct: 42  YGYQNIRTPIVEHTQLFTRGIGEVTDIVEKEMYSFVD--ALNGENLTLRPEN-TAAVVRA 98

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD--DAHVFCTKEQMFNECLK 406
                   + P RL   G ++R+E         R R F Q   +A  F   +       +
Sbjct: 99  AIEHNMLYDGPKRLWYLGPMFRHERPQR----GRYRQFHQVGVEALGFAGPDADA----E 150

Query: 407 IHNLIISIYKDFGFE-------------------KIMVKLSTRPEKRVGSDALWDDAENI 447
           I  +   ++ D G                       ++K   +   ++  DA      N 
Sbjct: 151 IIMMCQRLWDDLGLTGIKLEINSLGLAEERAAHRVELIKYLEQHVDKLDDDAQRRLYTNP 210

Query: 448 MK------GVLDTIKNSSQDRINTGVLLGEGAFYGP-------KFEYILKDAIGRDWQCG 494
           ++        L  I  ++   I+    +    F G           + +   + R     
Sbjct: 211 LRVLDTKNPALQEIVRNAPQLIDFLGDVSRAHFDGLQQLLKANNLPFTINPRLVRGLDYY 270

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIH-------RAVFGS-IERFIGIMIENFKGNL 546
            + V   +  +  A    +   +  P++            +   +ER + ++ E      
Sbjct: 271 NLTVFEWVTDKLGAQGTVAAGGRYDPLIEQLGGKPTAACGWAMGVERILELLKEEH---- 326

Query: 547 PLWLSPIQ----AIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY----KIREH 598
              L P Q      V     +A E A  +A  L+   L +      +        +++  
Sbjct: 327 ---LVPEQEGVDVYVVHQGDAAREQAFIVAERLRDTGLDVILHCSADGAGASFKSQMKRA 383

Query: 599 SIKKIPIIIICGDKEASERSIGIR-RFGSTTTQKVSLLDAIPI 640
                   +I G+ E +  ++ ++   G+    + ++  ++P+
Sbjct: 384 DASGAAFAVIFGEDEVANGTVSVKPLRGTGAEGEKNVQQSVPV 426


>gi|170017957|ref|YP_001728876.1| seryl-tRNA synthetase [Leuconostoc citreum KM20]
 gi|238688940|sp|B1MW28|SYS_LEUCK RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|169804814|gb|ACA83432.1| seryl-tRNA synthetase [Leuconostoc citreum KM20]
          Length = 436

 Score = 64.8 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 69/188 (36%), Gaps = 16/188 (8%)

Query: 272 GWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G ++ + + ++M     ++ Y E+ TP V++      +G +  ++ + + V+  + T   
Sbjct: 179 GARLERAVYNFMLDEHRQEGYTEMITPIVVNDAAMFGTGQYPKFQDDAYRVEGLEQT--- 235

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE---PSGSLHGLMRVRGFT 387
                  P         ++       +LP++       +R E         GL+R+  F 
Sbjct: 236 -----YIPTAEVPLTNYYSGETLPAEDLPIKFTALSPSFRKEAGAAGKDTRGLIRLHQFN 290

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +   F   EQ + E   +     +I +  G    ++ LST              +W  
Sbjct: 291 KVEMVKFTKPEQSYEELESMTANAENILQKLGLPYHVIMLSTGDMGFSAAKTYDVEVWMP 350

Query: 444 AENIMKGV 451
            + + + +
Sbjct: 351 QQQVYREI 358


>gi|317471795|ref|ZP_07931133.1| alanyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
 gi|316900721|gb|EFV22697.1| alanyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
          Length = 879

 Score = 64.8 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 30/142 (21%), Positives = 59/142 (41%), Gaps = 10/142 (7%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFSS 116
            + +   E  R      HS  H++ +A++++        G         +DF    P +S
Sbjct: 549 KVLLNVNERNRRQTEKNHSATHLLQKALRTVLGSHVEQAGSSNNAKHLRFDFTHFSPMTS 608

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
           +E+ ++E  + E IA + P   + +S ++A+          K          + V +   
Sbjct: 609 EEIKKVEDIVNEEIAANRPVETKLMSMDEAKNTGAMALFGEKY--------GDEVRVVSM 660

Query: 177 GEW-FDLCRGPHVRSTGQVKKF 197
           G++  +LC G HV +TG +  F
Sbjct: 661 GDFSVELCGGTHVANTGSITVF 682


>gi|116334281|ref|YP_795808.1| seryl-tRNA synthetase [Lactobacillus brevis ATCC 367]
 gi|122269037|sp|Q03PU5|SYS_LACBA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|116099628|gb|ABJ64777.1| seryl-tRNA synthetase [Lactobacillus brevis ATCC 367]
          Length = 423

 Score = 64.8 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 31/212 (14%), Positives = 78/212 (36%), Gaps = 20/212 (9%)

Query: 242 EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINT 296
             + H ++  ++ +          GS  +++   G ++ + + ++ +    K  ++E+  
Sbjct: 136 TPKAHYEIGEDLGILDFEAGAKVSGSRYLYYLGAGARLERAVYNFFLDENTKAGFKEVLP 195

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +++      +G +  ++ +++ +K             L P      V  +   +    
Sbjct: 196 PYIVNDDSMYGTGQFPKFKEDVYQLKD--------EAMTLIPTAEVPLVNYYRDEVIPEE 247

Query: 357 ELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           ELPV        +R+E   +     GL+R+  F + +   FC  E  + E   +     S
Sbjct: 248 ELPVWFTALTPAFRSEAGSAGRDTRGLIRLHQFNKVEMVKFCKPENSWAELEALTKHAES 307

Query: 414 IYKDFGFEKIMVKLSTRPEKR----VGSDALW 441
           + +  G    ++ L+T              +W
Sbjct: 308 LLQKLGLAYHVITLTTSDMSFTAAMTHDLEVW 339


>gi|221133281|ref|ZP_03559586.1| alanyl-tRNA synthetase [Glaciecola sp. HTCC2999]
          Length = 860

 Score = 64.8 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/150 (17%), Positives = 58/150 (38%), Gaps = 10/150 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFS 115
            ++     +  R    + HS  H++  A++ +  E     G +++D    +DF   +  +
Sbjct: 537 ANVVTQVDDSRREAIKLNHSATHLLHAALRELLGEHVAQKGSLVDDEKLRFDFAHYEAVT 596

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           +++L  IE+ +   I ++     + +  ++A+          K          E V +  
Sbjct: 597 TEQLISIERLVNAQIRQNHELTTKLMELDEAKASGAMALFGEKY--------DEKVRVVS 648

Query: 176 QGEW-FDLCRGPHVRSTGQVKKFFKLMKVA 204
            G +  +LC G HV  TG +       +  
Sbjct: 649 MGNFSTELCGGTHVSRTGDIGLCKITSESG 678


>gi|313201004|ref|YP_004039662.1| seryl-tRNA synthetase [Methylovorus sp. MP688]
 gi|312440320|gb|ADQ84426.1| seryl-tRNA synthetase [Methylovorus sp. MP688]
          Length = 429

 Score = 64.8 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 38/222 (17%), Positives = 78/222 (35%), Gaps = 13/222 (5%)

Query: 242 EKRDHRKLAREMDL-FHIAEDGSGVIFWHRKG--WKIFQTLISYMRRKIKD--DYEEINT 296
           E +DH  +   + L F      +G  F   +G   ++ + L  +M     +   Y E  T
Sbjct: 135 EIKDHTDVGMPLGLDFDTGAKLAGARFTLMRGQIARLHRALAQFMLDTQTERHGYTECYT 194

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +++    + +G    + A++FA +       +     L P +           + +  
Sbjct: 195 PYIVNADSLRGTGQLPKFEADLFAAQKGGQE-GEGEALYLIPTSEVTLTNTVRDEILAAE 253

Query: 357 ELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
            LPV+L      +R+E         G++R   F + +       E+ +    ++      
Sbjct: 254 SLPVKLTAHTPCFRSEAGSYGRDTRGMIRQHQFDKVEMVQIVHPEKSYEALEEMVGHAEY 313

Query: 414 IYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
           I +  G    +V L T              +W  A+N  + +
Sbjct: 314 ILQALGLPYRVVSLCTGDMGFGAAKTYDLEVWLPAQNTYREI 355


>gi|255534305|ref|YP_003094676.1| seryl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10]
 gi|255340501|gb|ACU06614.1| Seryl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10]
          Length = 422

 Score = 64.8 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 74/219 (33%), Gaps = 20/219 (9%)

Query: 245 DHRKLAREMDLFHIA----EDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQV 299
            H +LA++ +L          G+G   +  KG ++ ++L+ Y + +     Y E+N P V
Sbjct: 142 PHWELAKKYNLIDFELGVKVAGAGFPVYFGKGARLQRSLVQYFLDKNTDAGYLEVNPPHV 201

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           +++           Y       K             L P        ++   L   RELP
Sbjct: 202 VNE--------ASGYGTGQLPDKEGQMYYAPEDKLYLIPTAEVPVTNLYRDVLLEERELP 253

Query: 360 VRLAEFGSVYRNEPSG---SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ++   F   YR E       + GL R+  F + +       E  +    ++   + ++  
Sbjct: 254 IKNTAFSQCYRREAGSYGAHVRGLNRLHQFEKVEIVRLEKPENSYAALDEMVEHVKTLLT 313

Query: 417 DFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
           +      +++L                +W  A+     V
Sbjct: 314 ELELPFRILRLCGGDMGFTSSMTYDFEVWSAAQEKWLEV 352


>gi|205371825|sp|Q89I89|SYA_BRAJA RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
          Length = 892

 Score = 64.8 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 30/140 (21%), Positives = 59/140 (42%), Gaps = 5/140 (3%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSS 116
           ++++      RS     HS  H++ EA++ +  +     G  +  D   +DF   +P ++
Sbjct: 548 ALQLEVDHSRRSSIRAHHSATHLIHEALRQVLGDHIAQRGSMVAPDRLRFDFVHPKPITA 607

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYK----VEILESIPAKENVT 172
           +ELA++E    +++  +     + +  ++ARE         K    V ++          
Sbjct: 608 EELARVEDIANDVVLENDEVTTRVMGVDEAREAGARALFGEKYGDEVRVVSMGRTARERG 667

Query: 173 LYRQGEWFDLCRGPHVRSTG 192
               G   +LC G HVR TG
Sbjct: 668 ANALGWSVELCGGTHVRRTG 687


>gi|167629223|ref|YP_001679722.1| seryl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
 gi|238687865|sp|B0TAQ9|SYS_HELMI RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|167591963|gb|ABZ83711.1| seryl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
          Length = 422

 Score = 64.8 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 47/340 (13%), Positives = 108/340 (31%), Gaps = 43/340 (12%)

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPA-KENVTLYRQGEW 179
           ++E    +  A  +   ++  + E A  L    ++     + + I A  + +T       
Sbjct: 43  EVESLKAKRNAVSAEIARRKKAKEDAEALIAEMRQ-----VGDQIKALDDELTRIELDMD 97

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
             +   P++          +   V    W             GT       +  +    E
Sbjct: 98  NRMLYIPNIPHASVPVGTSEEDNVEVRRW-------------GTPRTFDFPVKAHWDIGE 144

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           +    D ++ A+          G         G ++ + +I+ M     +  Y E+  P 
Sbjct: 145 DLNILDFQRGAKISGARFTVYKG--------LGARLERAVINLMMDTHAQRGYTEVLPPY 196

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++++     +G    +  +MFAV            + L P        ++ + +    +L
Sbjct: 197 LVNRQSMLGTGQLPKFAEDMFAV--------AGTDYYLIPTAEVPVTNLYTNEILDADKL 248

Query: 359 PVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           P+    + + +R E   +     GL+R   F + +   F   E  ++E  K+      I 
Sbjct: 249 PIHHCAYSACFRAEAGAAGRDTRGLIRQHQFNKVELVKFTRPENSYDELEKLTKDAEHIL 308

Query: 416 KDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
           +  G    ++ L T              +W  +    + +
Sbjct: 309 QLLGLPYRVITLCTGDMGFSAAKTYDIEVWLPSFGAYREI 348


>gi|53719148|ref|YP_108134.1| histidyl-tRNA synthetase [Burkholderia pseudomallei K96243]
 gi|126453409|ref|YP_001066491.1| histidyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|167719270|ref|ZP_02402506.1| histidyl-tRNA synthetase [Burkholderia pseudomallei DM98]
 gi|167738266|ref|ZP_02411040.1| histidyl-tRNA synthetase [Burkholderia pseudomallei 14]
 gi|167815456|ref|ZP_02447136.1| histidyl-tRNA synthetase [Burkholderia pseudomallei 91]
 gi|167845407|ref|ZP_02470915.1| histidyl-tRNA synthetase [Burkholderia pseudomallei B7210]
 gi|167902398|ref|ZP_02489603.1| histidyl-tRNA synthetase [Burkholderia pseudomallei NCTC 13177]
 gi|242314906|ref|ZP_04813922.1| histidine--tRNA ligase [Burkholderia pseudomallei 1106b]
 gi|254179552|ref|ZP_04886151.1| histidyl-tRNA synthetase [Burkholderia pseudomallei 1655]
 gi|81690387|sp|Q63UT2|SYH_BURPS RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|166227951|sp|A3NVX0|SYH_BURP0 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|52209562|emb|CAH35515.1| histidyl-tRNA synthetase [Burkholderia pseudomallei K96243]
 gi|126227051|gb|ABN90591.1| histidyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|184210092|gb|EDU07135.1| histidyl-tRNA synthetase [Burkholderia pseudomallei 1655]
 gi|242138145|gb|EES24547.1| histidine--tRNA ligase [Burkholderia pseudomallei 1106b]
          Length = 446

 Score = 64.8 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 57/403 (14%), Positives = 121/403 (30%), Gaps = 69/403 (17%)

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
             Y+ I TP V    L+ +     +           D    +     L+P N    V   
Sbjct: 42  YGYQNIRTPIVEHTQLFTRGIGEVTDIVEKEMYSFVD--ALNGENLTLRPEN-TAAVVRA 98

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD--DAHVFCTKEQMFNECLK 406
                   + P RL   G ++R+E         R R F Q   +A  F   +       +
Sbjct: 99  AIEHNMLYDGPKRLWYLGPMFRHERPQR----GRYRQFHQVGVEALGFAGPDADA----E 150

Query: 407 IHNLIISIYKDFGFE-------------------KIMVKLSTRPEKRVGSDALWDDAENI 447
           I  +   ++ D G                       ++K   +   ++  DA      N 
Sbjct: 151 IIMMCQRLWDDLGLTGIKLEINSLGLAEERAAHRVELIKYLEQHVDKLDDDAQRRLYTNP 210

Query: 448 MK------GVLDTIKNSSQDRINTGVLLGEGAFYGP-------KFEYILKDAIGRDWQCG 494
           ++        L  I  ++   I+    +    F G           + +   + R     
Sbjct: 211 LRVLDTKNPALQEIVRNAPQLIDFLGDVSRAHFDGLQRLLKANNLPFTINPRLVRGLDYY 270

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIH-------RAVFGS-IERFIGIMIENFKGNL 546
            + V   +  +  A    +   +  P++            +   +ER + ++ E      
Sbjct: 271 NLTVFEWVTDKLGAQGTVAAGGRYDPLIEQLGGKPTAACGWAMGVERILELLKEEH---- 326

Query: 547 PLWLSPIQ----AIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY----KIREH 598
              L P Q      V     +A E A  +A  L+   L +      +        +++  
Sbjct: 327 ---LVPEQEGVDVYVVHQGDAAREQAFIVAERLRDTGLDVILHCSADGAGASFKSQMKRA 383

Query: 599 SIKKIPIIIICGDKEASERSIGIR-RFGSTTTQKVSLLDAIPI 640
                   +I G+ E +  ++ ++   G+    + ++  ++P+
Sbjct: 384 DASGAAFAVIFGEDEVANGTVSVKPLRGTGAEGEKNVQQSVPV 426


>gi|332185154|ref|ZP_08386903.1| alanyl-tRNA synthetase [Sphingomonas sp. S17]
 gi|332014878|gb|EGI56934.1| alanyl-tRNA synthetase [Sphingomonas sp. S17]
          Length = 882

 Score = 64.8 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 29/144 (20%), Positives = 64/144 (44%), Gaps = 7/144 (4%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFS 115
            S+++      R+     HS  H++ EA++          G  +  +   +DF +    +
Sbjct: 547 DSVKLAIDTTRRAAIRANHSATHLLHEALRQRLGTHVAQKGSLVAPERLRFDFSQPVGMT 606

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKAREL--FESKKEAYKVEILESIPAKENVTL 173
           +D++A++E K+ E +  + P + + ++ ++A E+       E Y  E+      ++    
Sbjct: 607 ADDIAEVEAKVNEQVRGNGPVVTRLMTPDEAIEMGAMALFGEKYGDEVRVVSMGEDADGT 666

Query: 174 YRQGEWFDLCRGPHVRSTGQVKKF 197
           Y      +LC G HV + G++  F
Sbjct: 667 YSL----ELCGGTHVNALGEIGVF 686


>gi|157146419|ref|YP_001453738.1| seryl-tRNA synthetase [Citrobacter koseri ATCC BAA-895]
 gi|166219863|sp|A8AII9|SYS_CITK8 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|157083624|gb|ABV13302.1| hypothetical protein CKO_02178 [Citrobacter koseri ATCC BAA-895]
          Length = 430

 Score = 64.8 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 64/188 (34%), Gaps = 10/188 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M     +   Y E   P +++      +G    +  ++F  +  ++   D
Sbjct: 170 ARMHRALSQFMLDLHTEQHGYSENYVPYLVNHDTLYGTGQLPKFAGDLFHTRPLEEEA-D 228

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
              +AL P        +    +     LP+++      +R+E         GL+R+  F 
Sbjct: 229 SSNYALIPTAEVPLTNLVRDEIIDEDALPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFD 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E+  +   ++      + +  G     + L T              +W  
Sbjct: 289 KVEMVQIVRPEESMDALEEMTGHAEKVLQLLGLPYRKIVLCTGDMGFGACKTYDLEVWIP 348

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 349 AQNTYREI 356


>gi|121595739|ref|YP_987635.1| seryl-tRNA synthetase [Acidovorax sp. JS42]
 gi|166200592|sp|A1WBD4|SYS_ACISJ RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|120607819|gb|ABM43559.1| seryl-tRNA synthetase [Acidovorax sp. JS42]
          Length = 442

 Score = 64.8 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 36/239 (15%), Positives = 81/239 (33%), Gaps = 15/239 (6%)

Query: 228 QQELTQYLYFLEESEKRDHRKLAREMDL-FHIAEDGSGVIFWHRKG--WKIFQTLISYM- 283
           +               +DH  L   + L F +    SG  F   KG   ++ + L  +M 
Sbjct: 130 RWSPDGQQPRSLGFTPKDHVDLGEPLGLDFDMGVKLSGSRFTVMKGGIARLHRALAQFML 189

Query: 284 -RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK---DLRTFALKPM 339
             +  +  Y E   P V++    + +G    +  ++FA +      +   D     L P 
Sbjct: 190 DVQTQEHGYTECYVPYVVNADSLKGTGQLPKFEGDLFAAQKGGQDAEPVPDNAQLYLIPT 249

Query: 340 NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCT 396
           +           + +  +LP++L      +R+E         G++R   F + +      
Sbjct: 250 SEVPLTNFVRDEVLAEAQLPLKLTAHTPCFRSEAGSYGRDTRGMIRQHQFDKVEMVQIVH 309

Query: 397 KEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
            ++ +    ++     ++ +  G    ++ L T              +W  A+N  + +
Sbjct: 310 PDKSYEALEEMTRHAEAVLQKLGLPYRVMSLCTGDMGFGAAKTYDLEVWLPAQNTYREI 368


>gi|332705412|ref|ZP_08425490.1| seryl-tRNA synthetase [Lyngbya majuscula 3L]
 gi|332355772|gb|EGJ35234.1| seryl-tRNA synthetase [Lyngbya majuscula 3L]
          Length = 427

 Score = 64.8 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 67/188 (35%), Gaps = 16/188 (8%)

Query: 272 GWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G  + + LI++M  ++I   Y E+  P +++      +G    +  +  + KC+DD    
Sbjct: 176 GAALERALINFMLDQQIAAGYTEVMPPVLINSESLTATGQLPKFAED--SFKCSDD---- 229

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
                L P      V ++   +    +LP+ L  F   +R E         GL+R+  F 
Sbjct: 230 --DLWLAPTAEVPLVNLYRDEILEASQLPINLCAFTPCFRREAGSYGRDTRGLIRLHQFN 287

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +            E  K+     +I +        V+L T              +W  
Sbjct: 288 KVELVKIVEPSTSSQEHQKLLKNAEAILETLKLPYRTVELCTGDIGFSAATTYDLEVWLP 347

Query: 444 AENIMKGV 451
           ++   + +
Sbjct: 348 SQRTYREI 355


>gi|242310739|ref|ZP_04809894.1| alanyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489]
 gi|239523137|gb|EEQ63003.1| alanyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489]
          Length = 859

 Score = 64.8 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 63/147 (42%), Gaps = 10/147 (6%)

Query: 60  EIITPEDPRSLAVI-RHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSD 117
           E++       L +   HS  H++ +A++ +  E     G ++E +   +DF   +  S +
Sbjct: 552 EVVAQVSQERLEIAKHHSATHLLHKALREVLGEHIAQAGSLVESNRLRFDFSHPKALSYE 611

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           E+ +IE  + E I   +P + + +  + A+          K          +NV +   G
Sbjct: 612 EIEKIEILVNEKICLSNPQICETMDIDSAKAKGAMALFGEKY--------GKNVRVITFG 663

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVA 204
           +  +LC G HV +T  +  F+ + +  
Sbjct: 664 DSIELCGGIHVENTANIGSFYIIKESG 690


>gi|150006127|ref|YP_001300871.1| seryl-tRNA synthetase [Bacteroides vulgatus ATCC 8482]
 gi|254883514|ref|ZP_05256224.1| seryl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
 gi|294775307|ref|ZP_06740830.1| serine--tRNA ligase [Bacteroides vulgatus PC510]
 gi|319641697|ref|ZP_07996380.1| seryl-tRNA synthetase [Bacteroides sp. 3_1_40A]
 gi|149934551|gb|ABR41249.1| seryl-tRNA synthetase [Bacteroides vulgatus ATCC 8482]
 gi|254836307|gb|EET16616.1| seryl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
 gi|294450884|gb|EFG19361.1| serine--tRNA ligase [Bacteroides vulgatus PC510]
 gi|317386671|gb|EFV67567.1| seryl-tRNA synthetase [Bacteroides sp. 3_1_40A]
          Length = 424

 Score = 64.8 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 70/198 (35%), Gaps = 16/198 (8%)

Query: 245 DHRKLAREMDLFHIA----EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQV 299
            H +LA++ DL          G+G   +  KG ++ + LI++   + +   YEEI  P V
Sbjct: 143 PHWELAKKYDLIDFDLGVKITGAGFPVYKGKGARLQRALINFFLDEARASGYEEIMPPTV 202

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           ++            Y       K       ++    L P        ++   +   ++LP
Sbjct: 203 VNT--------ASGYGTGQLPDKEGQMYHCEVDDLYLIPTAEVPVTNIYRDVILDEKQLP 254

Query: 360 VRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ++   +   +R E       + GL R+  F++ +       E       ++ + +  + K
Sbjct: 255 IKNCAYTQCFRREAGSYGKDVRGLNRLHEFSKVELVRIDKPEHSKQSHQEMLDHVEGLLK 314

Query: 417 DFGFEKIMVKLSTRPEKR 434
                  +++L       
Sbjct: 315 KLELPYRILRLCGGDMSF 332


>gi|148543336|ref|YP_001270706.1| seryl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
 gi|184152746|ref|YP_001841087.1| seryl-tRNA synthetase [Lactobacillus reuteri JCM 1112]
 gi|227364408|ref|ZP_03848498.1| seryl-tRNA synthetase [Lactobacillus reuteri MM2-3]
 gi|325683608|ref|ZP_08163124.1| serine--tRNA ligase [Lactobacillus reuteri MM4-1A]
 gi|166987314|sp|A5VHP5|SYS_LACRD RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|229890222|sp|B2G575|SYS_LACRJ RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|148530370|gb|ABQ82369.1| seryl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
 gi|183224090|dbj|BAG24607.1| seryl-tRNA synthase [Lactobacillus reuteri JCM 1112]
 gi|227070501|gb|EEI08834.1| seryl-tRNA synthetase [Lactobacillus reuteri MM2-3]
 gi|324977958|gb|EGC14909.1| serine--tRNA ligase [Lactobacillus reuteri MM4-1A]
          Length = 435

 Score = 64.8 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 51/369 (13%), Positives = 115/369 (31%), Gaps = 47/369 (12%)

Query: 101 EDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKE----- 155
           E  FY +    +    +E+ ++    ++                +A +     K      
Sbjct: 10  EPDFYKEKLATRGVKPEEIDEVIALDKKRRELLQQTETMKAQRNEASKKIGEAKRNGESA 69

Query: 156 ----AYKVEILESIPAKENVTLYRQGEWFD-LCRGPHVRSTGQVKKFFKLMKVAGAYWRG 210
                   E+ + I   +        E  D +   P+V   G      +   V       
Sbjct: 70  DAAIKETRELGDKIKELDTEVEANDAELHDKMAHLPNVPHDGVPVSLTEDGAVE------ 123

Query: 211 DSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHR 270
                 L ++         E   +    E     D  +  +      +        ++  
Sbjct: 124 ------LRKVGKVRDFD-FEPKHHWDIGENLGILDFDRAGKVSGARFV--------YYLG 168

Query: 271 KGWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
            G ++ + + ++M    +K+ Y E+  P +++      +G +  ++  ++ V        
Sbjct: 169 LGAQLERAVYNFMLDEHMKEGYTEVLPPYIVNADSMYGTGQFPKFKEGVYQV-------- 220

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGF 386
           +     L P         +   +    ELPV +      +R+E   +     GL+R+  F
Sbjct: 221 NGEDMTLIPTAEVPLTNYYRGEVIPTEELPVYVTALTPSFRSEAGAAGRDTRGLIRMHQF 280

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD----ALWD 442
            + +   +   E  ++E  K+     +I K       ++ L+T       S+     LW 
Sbjct: 281 NKVEMVKYTKPENSWDELEKMTANAENILKKLNLPYHVITLTTGDMSFTASETHDLELWM 340

Query: 443 DAENIMKGV 451
            A+N  + V
Sbjct: 341 PAQNKYREV 349


>gi|134277363|ref|ZP_01764078.1| histidyl-tRNA synthetase [Burkholderia pseudomallei 305]
 gi|134251013|gb|EBA51092.1| histidyl-tRNA synthetase [Burkholderia pseudomallei 305]
          Length = 446

 Score = 64.8 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 57/403 (14%), Positives = 121/403 (30%), Gaps = 69/403 (17%)

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
             Y+ I TP V    L+ +     +           D    +     L+P N    V   
Sbjct: 42  YGYQNIRTPIVEHTQLFTRGIGEVTDIVEKEMYSFVD--ALNGENLTLRPEN-TAAVVRA 98

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD--DAHVFCTKEQMFNECLK 406
                   + P RL   G ++R+E         R R F Q   +A  F   +       +
Sbjct: 99  AIEHNMLYDGPKRLWYLGPMFRHERPQR----GRYRQFHQVGVEALGFAGPDADA----E 150

Query: 407 IHNLIISIYKDFGFE-------------------KIMVKLSTRPEKRVGSDALWDDAENI 447
           I  +   ++ D G                       ++K   +   ++  DA      N 
Sbjct: 151 IIMMCQRLWDDLGLTGIKLEINSLGLAEERAAHRVELIKYLEQHVDKLDDDAQRRLYTNP 210

Query: 448 MK------GVLDTIKNSSQDRINTGVLLGEGAFYGP-------KFEYILKDAIGRDWQCG 494
           ++        L  I  ++   I+    +    F G           + +   + R     
Sbjct: 211 LRVLDTKNPALQEIVRNAPQLIDFLGDVSRAHFDGLQRLLKANNLPFTINPRLVRGLDYY 270

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIH-------RAVFGS-IERFIGIMIENFKGNL 546
            + V   +  +  A    +   +  P++            +   +ER + ++ E      
Sbjct: 271 NLTVFEWVTDKLGAQGTVAAGGRYDPLIEQLGGKPTAACGWAMGVERILELLKEEH---- 326

Query: 547 PLWLSPIQ----AIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY----KIREH 598
              L P Q      V     +A E A  +A  L+   L +      +        +++  
Sbjct: 327 ---LVPEQEGVDVYVVHQGDAAREQAFIVAERLRDTGLDVILHCSADGAGASFKSQMKRA 383

Query: 599 SIKKIPIIIICGDKEASERSIGIR-RFGSTTTQKVSLLDAIPI 640
                   +I G+ E +  ++ ++   G+    + ++  ++P+
Sbjct: 384 DASGAAFAVIFGEDEVANGTVSVKPLRGTGAEGEKNVQQSVPV 426


>gi|322392494|ref|ZP_08065954.1| histidine--tRNA ligase [Streptococcus peroris ATCC 700780]
 gi|321144486|gb|EFX39887.1| histidine--tRNA ligase [Streptococcus peroris ATCC 700780]
          Length = 426

 Score = 64.8 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 60/412 (14%), Positives = 129/412 (31%), Gaps = 56/412 (13%)

Query: 276 FQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           +Q +  + R   K  +Y E+ TP       ++          ++   +  D   K  R  
Sbjct: 20  WQYVEGFAREIFKRYNYAEVRTPIF---EHYEVISRSVGDTTDIVTKEMYDFYDKGDRHI 76

Query: 335 ALKPMNCPGHVAVFNHGLKS-----YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
            L+P    G   V    +++       + P +    G ++R E   +     R+R F Q 
Sbjct: 77  TLRP---EGTAPVVRSYVENKLFAPEVQKPSKFYYMGPMFRYERPQA----GRLRQFHQI 129

Query: 390 DAHVFCTKEQM-FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWD------ 442
               F +       E + +    +      G +  +  L     +     AL D      
Sbjct: 130 GVECFGSSNPATDVETIAMAAHFLKAIGIQGVKLHLNTLGNPESRAAYRQALIDYLTPLK 189

Query: 443 -----DAENIMKG----VLDTIKNSSQDR-------INTGVLLGEGAFYGPK-------F 479
                D++  ++     VLD+ +   +         ++      +  F   +        
Sbjct: 190 ETLSKDSQRRLEENPLRVLDSKEKEDKAAVENAPSILDYLDEESQAHFDAVRQMLENLGV 249

Query: 480 EYILKDAI--GRDWQCGTIQVDFNLPSRFNAFYVN---SHSEKCHPVMIHRAVFG---SI 531
           +YI+   +  G D+   TI                         +      A FG    +
Sbjct: 250 DYIIDSNMVRGLDYYNHTIFEFITEIEGNELTVCAGGRYDGLVAYFGGPETAGFGFGLGV 309

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           ER + ++    +G +    + +   +  +   A   A E+   L+      E D+ N  +
Sbjct: 310 ERLLLVL--EKQGVVLPIENALDVYIAVLGEGANIKALELVQALRQQGFKAERDYLNRKL 367

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             + +   +     +I  G+ E     + ++   +    +VSL   I   ++
Sbjct: 368 KAQFKSADVFAAKTLITLGESEVESGQVTVKNNQTREEVQVSLEAIIQDFSE 419


>gi|167823868|ref|ZP_02455339.1| histidyl-tRNA synthetase [Burkholderia pseudomallei 9]
 gi|226197114|ref|ZP_03792691.1| histidine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
 gi|254198372|ref|ZP_04904794.1| histidyl-tRNA synthetase [Burkholderia pseudomallei S13]
 gi|169655113|gb|EDS87806.1| histidyl-tRNA synthetase [Burkholderia pseudomallei S13]
 gi|225930493|gb|EEH26503.1| histidine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
          Length = 446

 Score = 64.8 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 57/403 (14%), Positives = 122/403 (30%), Gaps = 69/403 (17%)

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
             Y+ I TP V    L+ +     +           D    +  +  L+P N    V   
Sbjct: 42  YGYQNIRTPIVEHTQLFTRGIGEVTDIVEKEMYSFVD--ALNGESLTLRPEN-TAAVVRA 98

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD--DAHVFCTKEQMFNECLK 406
                   + P RL   G ++R+E         R R F Q   +A  F   +       +
Sbjct: 99  AIEHNMLYDGPKRLWYLGPMFRHERPQR----GRYRQFHQVGVEALGFAGPDADA----E 150

Query: 407 IHNLIISIYKDFGFE-------------------KIMVKLSTRPEKRVGSDALWDDAENI 447
           I  +   ++ D G                       ++K   +   ++  DA      N 
Sbjct: 151 IIMMCQRLWDDLGLTGIKLEINSLGLAEERAAHRVELIKYLEQHVDKLDDDAQRRLYTNP 210

Query: 448 MK------GVLDTIKNSSQDRINTGVLLGEGAFYGP-------KFEYILKDAIGRDWQCG 494
           ++        L  I  ++   I+    +    F G           + +   + R     
Sbjct: 211 LRVLDTKNPALQEIVRNAPQLIDFLGDVSRAHFDGLQRLLKANNLPFTINPRLVRGLDYY 270

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIH-------RAVFGS-IERFIGIMIENFKGNL 546
            + V   +  +  A    +   +  P++            +   +ER + ++ E      
Sbjct: 271 NLTVFEWVTDKLGAQGTVAAGGRYDPLIEQLGGKPTAACGWAMGVERILELLKEEH---- 326

Query: 547 PLWLSPIQ----AIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY----KIREH 598
              L P Q      V     +A E A  +A  L+   L +      +        +++  
Sbjct: 327 ---LVPEQEGVDVYVVHQGDAAREQAFIVAERLRDTGLDVILHCSADGAGASFKSQMKRA 383

Query: 599 SIKKIPIIIICGDKEASERSIGIR-RFGSTTTQKVSLLDAIPI 640
                   +I G+ E +  ++ ++   G+    + ++  ++P+
Sbjct: 384 DASGAAFAVIFGEDEVANGTVSVKPLRGTGAEGEKNVQQSVPV 426


>gi|27380861|ref|NP_772390.1| alanyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110]
 gi|27354027|dbj|BAC51015.1| alanyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110]
          Length = 894

 Score = 64.8 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 30/140 (21%), Positives = 59/140 (42%), Gaps = 5/140 (3%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSS 116
           ++++      RS     HS  H++ EA++ +  +     G  +  D   +DF   +P ++
Sbjct: 550 ALQLEVDHSRRSSIRAHHSATHLIHEALRQVLGDHIAQRGSMVAPDRLRFDFVHPKPITA 609

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYK----VEILESIPAKENVT 172
           +ELA++E    +++  +     + +  ++ARE         K    V ++          
Sbjct: 610 EELARVEDIANDVVLENDEVTTRVMGVDEAREAGARALFGEKYGDEVRVVSMGRTARERG 669

Query: 173 LYRQGEWFDLCRGPHVRSTG 192
               G   +LC G HVR TG
Sbjct: 670 ANALGWSVELCGGTHVRRTG 689


>gi|294782755|ref|ZP_06748081.1| histidine--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
 gi|294481396|gb|EFG29171.1| histidine--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
          Length = 412

 Score = 64.8 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 67/426 (15%), Positives = 146/426 (34%), Gaps = 73/426 (17%)

Query: 270 RKGWK-------IFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQ--QSGHWDSYRANM 318
            KG K       +    IS + +++     Y+   TP   +  L++       D     M
Sbjct: 7   PKGTKDIIGEDAVKYIYISNVTQEMFENYGYKFAKTPIFEETDLFKRGIGEATDVVEKEM 66

Query: 319 FAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLH 378
           +  K   D     R+  L+P N    V  +       +E   R    GS++R E   +  
Sbjct: 67  YTFKDKGD-----RSITLRPENTASMVRCYLENSIYAKEDVSRFYYNGSMFRYERPQA-- 119

Query: 379 GLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD 438
              R R F Q    VF  K  + +   ++  +  +     G   +  ++        GS 
Sbjct: 120 --GRQREFNQIGVEVFGEKSPILDA--EVIAMGYNFLTKLGITDL--EVKINSVGSKGSR 173

Query: 439 ALW-DDAENIMKGVLDTIKNSSQDRINTGVL-------LGEGAFY--GPKF-EYILKDAI 487
            ++ +      +  LD +    +DRIN   L        G+  FY   P   +Y+ +D  
Sbjct: 174 TIYREKLVEHFQSHLDDMCEDCKDRINRNPLRLLDCKVDGDKDFYKSAPSIIDYLFEDER 233

Query: 488 GRDWQCGT----------------IQVDFNLPSRFNAFYVN------------SHS---E 516
               +                     +D+   + F                    +   E
Sbjct: 234 KHYEEVKKYLTIFGVKFTEDPTLVRGLDYYSSTVFEIVTNKLGSQGTVLGGGRYDNLLKE 293

Query: 517 KCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLK 576
                +        +ER + +++E++  ++P         +  +    +E A +IA  L+
Sbjct: 294 LGDKDIPAFGFAAGVERVM-MLVEDYPKDVPD------VYIAWLGDDTIETAMKIAETLR 346

Query: 577 SHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
            ++  +  D+ ++ +   +++    +    II G+ E ++  + ++ F +   ++V + +
Sbjct: 347 KNNAKVYVDYSSKGMKSHMKKADKLETKYCIILGEDELNKGIVLLKDFSTREQKEVKIEE 406

Query: 637 AIPILT 642
            I  + 
Sbjct: 407 IINHIK 412


>gi|126653904|ref|ZP_01725751.1| alanyl-tRNA synthetase [Bacillus sp. B14905]
 gi|126589629|gb|EAZ83768.1| alanyl-tRNA synthetase [Bacillus sp. B14905]
          Length = 742

 Score = 64.8 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 33/144 (22%), Positives = 66/144 (45%), Gaps = 10/144 (6%)

Query: 56  EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPF 114
           E +++ I   D R+L +  H+  HIM  A++ +  +     G  +  D   +DF      
Sbjct: 412 EDAVQAIVNRDDRNLIIKNHTATHIMQRALKDVLGDHVNQAGSYVGPDRLRFDFSHFGQV 471

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
           + +EL QIE+ + E +  D   + + ++ +KA+E+        K          + V + 
Sbjct: 472 TKEELQQIERIVNEKVWDDIEVVIEEMAIDKAKEMGAMALFGEKY--------GDVVRVV 523

Query: 175 RQGEW-FDLCRGPHVRSTGQVKKF 197
             G++  +LC G HV+ + ++  F
Sbjct: 524 SIGDYSIELCGGIHVKRSSEIGFF 547


>gi|83815326|ref|YP_445967.1| seryl-tRNA synthetase [Salinibacter ruber DSM 13855]
 gi|123528514|sp|Q2S1G4|SYS_SALRD RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|83756720|gb|ABC44833.1| seryl-tRNA synthetase [Salinibacter ruber DSM 13855]
          Length = 428

 Score = 64.8 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 47/360 (13%), Positives = 103/360 (28%), Gaps = 42/360 (11%)

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            IG         + D+ +  +  EL  ++ +  E +++    LK+    E+A  + E   
Sbjct: 22  GIGSPDLVDTLLEIDETRRSAITELQDVQSRQNE-LSQQIGALKREGKDEEAEAIIEKTG 80

Query: 155 EAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNR 214
                E +  +  +      RQ E       P++                      D + 
Sbjct: 81  --RMKEKINRLKEEVQEAEARQEELV--LELPNIPHPSVPVGA-------------DEDD 123

Query: 215 PMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWK 274
             +    G       +   +    +     D  + A+           SG  F+  KG +
Sbjct: 124 NEVEATVGEMPAFDFDPAPHWELADRHNLVDLERGAKVAG--------SGFPFYLGKGAR 175

Query: 275 IFQTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           + + L+++ + R  +  Y E+  P  ++    +               K A         
Sbjct: 176 LQRALLNFFLDRARERGYTEMQAPLFVNPESAK--------GTGQIPDKDALMYEIPRDD 227

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDD 390
           F   P             + +  +LP R   +   +R E       + GL R+  F + +
Sbjct: 228 FYPIPTAEVPVTNFHRDEILAADDLPRRYCTYSPCWRREAGSYGSDVRGLNRLHQFDKVE 287

Query: 391 AHVFCTKEQMFNECLKIHNLIISIYKDFGFEK----IMVKLSTRPEKRVGSDALWDDAEN 446
                  ++ +     +     S             +        + +V    +W  A+ 
Sbjct: 288 LVRIVPPDESYRALDALLEDAESALDALDLPYRRLLMCTGDMGFTQAKVYDLEVWSAAQE 347


>gi|315187025|gb|EFU20782.1| alanyl-tRNA synthetase [Spirochaeta thermophila DSM 6578]
          Length = 603

 Score = 64.8 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 57/125 (45%), Gaps = 10/125 (8%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           H+  H++ +A++ +        G  I  +   +DF      + +++ ++E+ + + I  D
Sbjct: 459 HTATHLLHQALRIVLGPHVQQKGSNITPERLRFDFSHPDKLTPEQIRKVEEIVNQKIKED 518

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTG 192
            P   + ++ E+A+E         +          E V +Y  G++  ++C GPHV  TG
Sbjct: 519 LPVTMEVMTLEEAKEKGAIAFFTDRY--------DEKVKVYSVGDFSKEVCGGPHVERTG 570

Query: 193 QVKKF 197
            + +F
Sbjct: 571 VLGRF 575


>gi|325983477|ref|YP_004295879.1| alanyl-tRNA synthetase [Nitrosomonas sp. AL212]
 gi|325532996|gb|ADZ27717.1| alanyl-tRNA synthetase [Nitrosomonas sp. AL212]
          Length = 865

 Score = 64.8 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 52/128 (40%), Gaps = 10/128 (7%)

Query: 72  VIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEII 130
              HS  H++  A++ +        G +++ +   +DF    P ++D++  IE+ + + I
Sbjct: 549 ANNHSATHLLHAALREVLGTHVTQKGSLVDANRTRFDFSHNVPLTADDIRAIERLVNDQI 608

Query: 131 ARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVR 189
             +       + ++ A +         K          + V +   GE+  +LC G HV 
Sbjct: 609 RNNCIVEAATMKYDDAIKRGAMALFGEKY--------SDVVRVIGMGEFSTELCGGTHVP 660

Query: 190 STGQVKKF 197
             GQ+  F
Sbjct: 661 QVGQIGLF 668


>gi|242372594|ref|ZP_04818168.1| seryl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
 gi|242349649|gb|EES41250.1| seryl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
          Length = 435

 Score = 64.8 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 50/372 (13%), Positives = 124/372 (33%), Gaps = 35/372 (9%)

Query: 91  EVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEII--ARDSPFLKQYLSHEKARE 148
           ++++      +     +   + P   DE+ +++++ +++I    +    +  +S E A++
Sbjct: 10  DIRLFRNEPDKVKSKIELRGDDPKVVDEVLELDEQRRQLIGKTEEMKAKRNKVSEEIAQK 69

Query: 149 LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYW 208
               +     +  + ++  +      +  E  +  R   +R    +              
Sbjct: 70  KRNKENADDVIAEMRNLGDEIKENDAKLNEVDNKVRDILIRIPNLIND-------DVPQG 122

Query: 209 RGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFW 268
             D     L + +GT      E   +   +E+ +  D  + A+      +          
Sbjct: 123 ESDEENVELKK-WGTPREFNFEPKAHWDLVEDLKMADFDRAAKVSGARFVYLTNE----- 176

Query: 269 HRKGWKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADD 326
              G  + + L++YM  K   +  Y E+ TPQ+++      +G    +  ++F V     
Sbjct: 177 ---GAHLERALMNYMLTKHTTQHGYTEMMTPQLVNADTMFGTGQLPKFEEDLFKV----- 228

Query: 327 TIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRV 383
              +       P         +   +     LP +     + +R+E   +     GL+R+
Sbjct: 229 ---EKEGLYTIPTAEVPLTNFYRDEIIQPGVLPEKFTGQTACFRSEAGSAGRDTRGLIRL 285

Query: 384 RGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDA 439
             F + +   F   E  ++    +     +I ++ G     V L T              
Sbjct: 286 HQFDKVEMVRFEKPEDSWDALEDMTQNAEAILEELGLPYRRVILCTGDIGFSASKTYDLE 345

Query: 440 LWDDAENIMKGV 451
           +W  + N  K +
Sbjct: 346 VWLPSYNDYKEI 357


>gi|255654096|ref|ZP_05399505.1| seryl-tRNA synthetase [Clostridium difficile QCD-23m63]
 gi|296452479|ref|ZP_06894178.1| serine--tRNA ligase [Clostridium difficile NAP08]
 gi|296878247|ref|ZP_06902257.1| serine--tRNA ligase [Clostridium difficile NAP07]
 gi|296258685|gb|EFH05581.1| serine--tRNA ligase [Clostridium difficile NAP08]
 gi|296430755|gb|EFH16592.1| serine--tRNA ligase [Clostridium difficile NAP07]
          Length = 423

 Score = 64.8 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 48/355 (13%), Positives = 121/355 (34%), Gaps = 33/355 (9%)

Query: 105 YYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES 164
             D  + +    D    +E++ ++    D+         E  +E+     E  K E+  +
Sbjct: 1   MLDIKRIRENLDDIKKAMERRGEKEFDLDAVVELDNKRREILQEV-----EVMKNEL--N 53

Query: 165 IPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMK---VAGAYWRGDSNRPMLSRI- 220
           + +K    L ++G+     +      + ++K   + +K       Y            + 
Sbjct: 54  VNSKNIPQLIKEGKDVTEEKARLKELSDKIKGIDEKVKEVEAKMEYALMRIPNVPHPEVP 113

Query: 221 YGTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKI 275
            G       ++  +    +   E + H  +   + +          GS    +   G ++
Sbjct: 114 QGETDEDNVQIRTWGEPTKFDFEHKAHWDIGTGLGILDFERAGKITGSRFTLYRGLGARL 173

Query: 276 FQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
            ++L+++          Y E+  P + +++ +  +G    +  +MF +        +   
Sbjct: 174 ERSLMNFFLNTHTAKHGYTEVLPPFMANRNSFIGTGQLPKFEEDMFKI--------EGLE 225

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDD 390
           + L P        +  + +    ELP++   +   +R+E   +     GL+R   F + +
Sbjct: 226 YFLIPTAEVPVTNIHANEILDVAELPIKYCAYTPCFRSEAGSAGRDTRGLVRQHQFNKVE 285

Query: 391 AHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALW 441
              F   E  +NE   + +   ++ +  G    +VK+ T              +W
Sbjct: 286 LVKFVKPEDSYNELESLTHDAETMLQMLGLPYRVVKICTGDLGFTAAFKYDLEVW 340


>gi|91762223|ref|ZP_01264188.1| alanine-tRNA ligase [Candidatus Pelagibacter ubique HTCC1002]
 gi|91718025|gb|EAS84675.1| alanine-tRNA ligase [Candidatus Pelagibacter ubique HTCC1002]
          Length = 889

 Score = 64.8 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 46/212 (21%), Positives = 81/212 (38%), Gaps = 11/212 (5%)

Query: 45  GKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII-EDG 103
           GKV   S  +++ S+E+      R+     HS  H++ EA++ +  E     G ++  D 
Sbjct: 535 GKVKKGSVKLKD-SVELKIDTQRRNNIRAYHSATHLLHEALRRVLGEHVTQKGSLVQSDR 593

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE--LFESKKEAYKVEI 161
             +DF   +P S +E+ +IE  +  II + S    + ++ ++A E        E Y  E+
Sbjct: 594 LRFDFSHMKPISDEEMKKIEHYVNSIIEKKSEVKTRIMTPKEAVENGALALFGEKYGDEV 653

Query: 162 LESIPAKENVTLYRQGEWFDLCRGPHVRST---GQVKKFFKLMKVAGAYWRGDSNRPMLS 218
                  E    +      +LC G HV +T   G+ K   +    AG           L+
Sbjct: 654 RVLSMGDEEGKFF----STELCGGTHVVNTADIGKFKIISQSSIAAGVRRVEALRDVQLT 709

Query: 219 RIYGTAWNTQQELTQYLYFLEESEKRDHRKLA 250
                  N      Q    + +  +    KL 
Sbjct: 710 DFLKEKENQSNLSDQKNEAVIKELETKIIKLG 741


>gi|319901328|ref|YP_004161056.1| seryl-tRNA synthetase [Bacteroides helcogenes P 36-108]
 gi|319416359|gb|ADV43470.1| seryl-tRNA synthetase [Bacteroides helcogenes P 36-108]
          Length = 424

 Score = 64.8 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 30/214 (14%), Positives = 72/214 (33%), Gaps = 20/214 (9%)

Query: 245 DHRKLAREMDLFHIA----EDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQV 299
            H +L ++ D+          G+G   +  KG ++ + LI++ +       Y EI  P V
Sbjct: 143 PHWELTKKYDIIDFDLGVKITGAGFPVYKGKGARLQRALINFFLDEARTSGYTEIMPPTV 202

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           ++            Y       K       ++    L P        ++   +   ++LP
Sbjct: 203 VNA--------ASGYGTGQLPDKEGQMYHCEVDDLYLIPTAEVPVTNIYRDVILDEKQLP 254

Query: 360 VRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ++   +   +R E       + GL R+  F++ +       E       ++ + +  + K
Sbjct: 255 IKNCAYTECFRREAGSYGKDVRGLNRLHEFSKVELVRIDKPEHSKQSHQEMLDHVEGLLK 314

Query: 417 DFGFEKIMVKLSTRPEKRV----GSDALWDDAEN 446
                  +++L                ++ +A+ 
Sbjct: 315 KLELPYRILRLCGGDMSFTSSICYDFEVYSEAQK 348


>gi|291532482|emb|CBL05595.1| seryl-tRNA synthetase [Megamonas hypermegale ART12/1]
          Length = 402

 Score = 64.8 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 62/349 (17%), Positives = 119/349 (34%), Gaps = 35/349 (10%)

Query: 114 FSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVT- 172
            + D   ++EK+ +EIIA       Q  +  K     +  KE     ILE     E ++ 
Sbjct: 1   MNLDRFMELEKQRREIIAETENLKSQKNAVSKKISEMKKNKENADAVILEMRQVGEKISQ 60

Query: 173 -LYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQEL 231
              +  E  D      +R      +   + K        DS+ P + R +GT      E 
Sbjct: 61  LDKQLREVQDELHDILLRIPNMCHESVPVGK-------DDSDNPEVRR-WGTPREFDFEP 112

Query: 232 TQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-- 289
             +     + +  D  + A+               F+   G ++ + LI++M     D  
Sbjct: 113 KAHWDIGADLDILDPERAAKVTGTRFT--------FYKGLGARLERALINFMMDLHVDKQ 164

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
            Y E+  P + ++     +G    +  +MF ++  D        + L P           
Sbjct: 165 GYTEMLAPFIANKDSMTGTGQLPKFSEDMFKLEGLD--------YYLVPTGEVPATNYHR 216

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
             +    +LP   + + + +R E   +     GL+R   F + +   F   E  ++E  K
Sbjct: 217 DEILDGDKLPEYYSVYTACFRAEAGSAGRDTRGLIRQHQFNKVEMIKFVKPETSYDELEK 276

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
           + N    + +       +VKL T              +W  + N  + +
Sbjct: 277 MVNNAEEVLQLLEIPYHVVKLCTGDIGFTAAMTYDIEVWLPSYNTYREI 325


>gi|325698123|gb|EGD40004.1| histidine--tRNA ligase [Streptococcus sanguinis SK160]
          Length = 426

 Score = 64.8 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 62/418 (14%), Positives = 135/418 (32%), Gaps = 68/418 (16%)

Query: 269 HRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
             +    +Q +  + R+  +  +Y EI TP       ++          ++   +  D  
Sbjct: 13  LPQESAKWQYVEDFARKTFRKYNYGEIRTPIF---EHYEVISRSVGDTTDIVTKEMYDFY 69

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKS-----YRELPVRLAEFGSVYRNEPSGSLHGLMR 382
            K  R   L+P    G   V    +++       + PV++   GS++R E   +     R
Sbjct: 70  DKGDRHITLRP---EGTAPVVRSYVENKLFAPEVQKPVKVYYMGSMFRYERPQA----GR 122

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD------------FGFEKIMVKLSTR 430
           +R F Q  A  F +        +++  +    +KD             G  +        
Sbjct: 123 LREFHQIGAECFGSSNPA--TDVEMIAMAAQFFKDIGITNVSLELNSLGNPESRAAYRQA 180

Query: 431 PEKRVG--SDALWDDAENIMKG----VLDTIKNSSQDRIN-----TGVLLGEGAFYGPKF 479
               +     +L  D++  ++     VLD+ +   +  +         L  E + Y    
Sbjct: 181 LIDYLTPLKPSLSADSQRRLEENPLRVLDSKEPEDKAAVEGAPSILDYLDEESSTYFAAV 240

Query: 480 EYILKD-----------AIGRDWQCGTI----------QVDFNLPSRFNAFYVNSHSEKC 518
             +L+              G D+   TI          Q+      R++         + 
Sbjct: 241 RSMLETLQIPYVINTNMVRGLDYYNHTIFEFTTEVAGSQLTICAGGRYDGLVAYFGGPET 300

Query: 519 HPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSH 578
             V     +    ER + ++  + +G      + +   V  + + A   A E+   L++ 
Sbjct: 301 PGVGFGMGL----ERLLLVL--DKQGVELPIETALDVYVAVLGAGANGRALELVQALRAQ 354

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
             + E D+ +  +  + +     K   +I  G+ E     + ++   +     VSL  
Sbjct: 355 GFAAERDYLDRKLKAQFKSADNFKAKTLITLGESEVESGQVTVKNNYNREEITVSLDQ 412


>gi|303257971|ref|ZP_07343980.1| serine--tRNA ligase [Burkholderiales bacterium 1_1_47]
 gi|331000048|ref|ZP_08323743.1| serine--tRNA ligase [Parasutterella excrementihominis YIT 11859]
 gi|302859314|gb|EFL82396.1| serine--tRNA ligase [Burkholderiales bacterium 1_1_47]
 gi|329572932|gb|EGG54552.1| serine--tRNA ligase [Parasutterella excrementihominis YIT 11859]
          Length = 433

 Score = 64.8 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 38/223 (17%), Positives = 80/223 (35%), Gaps = 15/223 (6%)

Query: 242 EKRDHRKLAREMDL-FHIAEDGSGVIF-WHRKG--WKIFQTLISYMRRKI--KDDYEEIN 295
           E +DH  +   + L F +    +G  F +  KG   ++ + L  +M      ++ Y E  
Sbjct: 135 EIKDHVDVGGPLGLDFDVGAKLAGTRFCFM-KGQVARLHRALAQFMLDTHTQENGYTECY 193

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP + +Q     +G    +  ++FA K       +   F L P +           +   
Sbjct: 194 TPYIANQETLIGTGQLPKFEEDLFAAKKGGQE-GEGEIFYLIPTSEVTLTNSVRGQMLKE 252

Query: 356 RELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
            +LP+++      +R+E         G++R   F + +       E+ +    ++     
Sbjct: 253 SDLPIKITAQTPCFRSEAGSYGKDTRGMIRQHQFEKVEMVRIVKPEESYKHLEEMVVCAE 312

Query: 413 SIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
            I +  G    ++ L T              +W  A+N  + +
Sbjct: 313 GILQKLGLPYRVITLCTGDMGFGSAKTYDLEVWIPAQNTYREI 355


>gi|218513382|ref|ZP_03510222.1| prolyl-tRNA synthetase [Rhizobium etli 8C-3]
          Length = 105

 Score = 64.8 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 20/104 (19%), Positives = 44/104 (42%), Gaps = 4/104 (3%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
           ++  +       +E+E   HR + R   +   ++   G+  W   G ++   + + +R +
Sbjct: 4   SRYFMPILKENPKEAEIVSHRLMLRAGMIRQQSQ---GIYSWLPLGKRVLDKVNAIIREE 60

Query: 287 IKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
                  E++ P +    LWQ+SG +D+Y   M  +K   +   
Sbjct: 61  QNRAGAIELSMPTLQSAELWQESGRYDAYGKEMLRIKDRQERPM 104


>gi|217069510|gb|ACJ83242.1| Rv2357c antigen [Mycobacterium tuberculosis]
          Length = 368

 Score = 64.8 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 54/360 (15%), Positives = 111/360 (30%), Gaps = 58/360 (16%)

Query: 307 QSGHWDS-YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAE 364
           + G W      NM           +     L+P    G    F + + +  ++ P  + +
Sbjct: 37  EPGQWTQPREFNMMLKTYLGPIETEEGLHYLRPETAQGIFVNFANVVTTARKKPPFGIGQ 96

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
            G  +RNE +   + + R R F Q +   F              +  +  Y D G  +  
Sbjct: 97  IGKSFRNEITPG-NFIFRTREFEQMEMEFFVEPATAKEWHQYWIDNRLQWYIDLGIRREN 155

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLD-TIKNSSQDRI---NTGVLLGEGAFYGPKFE 480
           ++             LW+  ++ +    D T+    +        G L G          
Sbjct: 156 LR-------------LWEHPKDKLSHYSDRTVDIEYKFGFMGNPWGELEG---------- 192

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI- 539
             + +    D          +L      FY   +  +  P +I     G    F+  +I 
Sbjct: 193 --VANRTDFDLSTHARHSGVDLS-----FYDQINDVRYTPYVIE-PAAGLTRSFMAFLID 244

Query: 540 ---ENFKGNL------------PLWLSPIQAIVTTIT--SSAVEYAQEIANLLKSHHLSI 582
              E+   N                L+P++A V  ++  +     A+++   L+    +I
Sbjct: 245 AYTEDEAPNTKGGMDKRTVLRLDPRLAPVKAAVLPLSRHADLSPKARDLGAELRKC-WNI 303

Query: 583 ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           + D     I  + R       P  +        + ++ +R   + T  +V++      L 
Sbjct: 304 DFDDAGA-IGRRYRRQDEVGTPFCVTVDFDSLQDNAVTVRERDAMTQDRVAMSSVADYLA 362


>gi|289758965|ref|ZP_06518343.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis T85]
 gi|289714529|gb|EFD78541.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis T85]
          Length = 513

 Score = 64.8 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 24/151 (15%), Positives = 53/151 (35%), Gaps = 10/151 (6%)

Query: 489 RDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG--- 544
           R  + G I Q+       F A  +    +     M    +   + R + ++ E       
Sbjct: 350 RGIEIGHIFQLGSKYTDAFTADVLGEDGKPVRLTMGSYGI--GVSRLVAVVAEQHHDELG 407

Query: 545 -NLPLWLSPIQAIVTTITSSAVEYAQEIANL--LKSHHLSIETDFRNETINYKIREHSIK 601
              P  ++P    +      A   A   A    L    + +  D R  +   K ++  + 
Sbjct: 408 LRWPSTVAPFDVHLVIANKDAQARAGATALAADLDRLGVEVLLDDRQASPGVKFKDAELL 467

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
            +P I++ G +  ++  + +R   S  T+++
Sbjct: 468 GMPWIVVVG-RGWADGVVELRDRFSGQTREL 497



 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/256 (12%), Positives = 75/256 (29%), Gaps = 21/256 (8%)

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
                    SY++ P+ L +  + YR+E      G++R R F   D++ F          
Sbjct: 48  TLTVKGEYSSYKDFPLTLYQIQTKYRDEARPR-AGILRAREFVMKDSYSFDIDAAGLKAA 106

Query: 405 LKIHN-LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI 463
              H      I+       ++V   +       S+    ++ +     +  +++     +
Sbjct: 107 YHAHREAYQRIFDRLQVRYVIVSAVSGAMGGSASEEFLAESPSGEDAFVRCLESGYAANV 166

Query: 464 NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
              V            + + +  +       TI       +  +     + ++    V+I
Sbjct: 167 EAVVTARP---DTLPIDGLPEAVVHDTGDTPTIASLVAWANEADLGRTVTAADTLKNVLI 223

Query: 524 HRAVFGSIERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVEYAQE---IA---- 572
                G     + I +    E     L   L P             ++A+    +     
Sbjct: 224 KVRQPGGDTELLAIGVPGDREVDDKRLGAALEPA----DYALLDDDDFAKHPFLVKGYIG 279

Query: 573 -NLLKSHHLSIETDFR 587
              L+ +++    D R
Sbjct: 280 PKALRENNVRYLVDPR 295


>gi|94496665|ref|ZP_01303241.1| histidyl-tRNA synthetase [Sphingomonas sp. SKA58]
 gi|94424025|gb|EAT09050.1| histidyl-tRNA synthetase [Sphingomonas sp. SKA58]
          Length = 419

 Score = 64.8 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 58/404 (14%), Positives = 124/404 (30%), Gaps = 54/404 (13%)

Query: 277 QTLISYMRRKIKDDYEEINTPQVLDQHLWQQS--GHWDSYRANMFAVKCADDTIKDLRTF 334
             + ++ R +    ++ +  P      ++ +S     D     M+  +        LR  
Sbjct: 30  HVVATFDRVRRLYGFQRVEVPVFEATAVFARSLGESTDVVSKEMYTFEDRGGDSITLR-- 87

Query: 335 ALKPMNCPGHVAVFNHGLKSY---RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
                  P   A  +    +    +  P+++A  G ++R E         R R F Q DA
Sbjct: 88  -------PEFTAGISRAYITEGWQQYAPLKVATHGPLFRYERPQK----GRFRQFHQLDA 136

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFE------KIMVKLSTRPEKRVGSDALWDDAE 445
            +    E   +   ++  +   + ++   E        +   ++R   R    A ++   
Sbjct: 137 EIIGAGEPGADV--ELLVMGDQLLRELKIEGVTLTLNTLGDAASRDAWRAALIAHFEANR 194

Query: 446 NIMKGVLDTIKNSSQDRINTGVLLGE--GAFYGPKFEYILKDAIGRDWQCGTIQVDF--N 501
             +          +  RI       +   A   P  +  L D     ++  T  +D    
Sbjct: 195 GDLSEDSVERLAKNPLRILDSKDPRDRPIADSAPDIDAYLTDEARGFFEKVTAGLDAAGV 254

Query: 502 LPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG-----IMIENFKGNLPL---WL--- 550
              R           +           G+    +G      +IEN  G       W    
Sbjct: 255 AWERNARLVRGLDYYRHTAFEFVTDRLGAQGTVLGGGRYDGLIENLGGPATPAVGWAAGI 314

Query: 551 --------SPIQ----AIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
                   +P       ++  +  +A   A  I   L+   ++ +  +R   +  +++  
Sbjct: 315 ERLAMLVDAPEVEKPSVVLIPMGEAAEARATGIIADLRRAGIACDMGYRGN-MKKRMQRA 373

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +       II GD E ++    +R  G+   Q V+L   +  +T
Sbjct: 374 NASGADWAIILGDDELAQGEAAVRNLGTGEQQAVALDALVGTVT 417


>gi|194467495|ref|ZP_03073482.1| seryl-tRNA synthetase [Lactobacillus reuteri 100-23]
 gi|194454531|gb|EDX43428.1| seryl-tRNA synthetase [Lactobacillus reuteri 100-23]
          Length = 435

 Score = 64.8 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 46/362 (12%), Positives = 113/362 (31%), Gaps = 33/362 (9%)

Query: 101 EDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE---LFESKKEAY 157
           E  FY +    +    +E+ ++    ++                +A +     +   E+ 
Sbjct: 10  EPDFYKEKLATRGVKPEEIDEVIALDKKRRELLQQTETMKAQRNEASKKIGEAKRNGESA 69

Query: 158 KVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPML 217
              I E+    + +      E              ++     +          +     L
Sbjct: 70  DAAIKETRELGDKIK-----ELDAEVEANDAELHDKMAHLPNVPHDGVPVSLTEDGAVEL 124

Query: 218 SRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQ 277
            ++         E   +    E     D  +  +      +        ++   G ++ +
Sbjct: 125 RKVGKVRDFD-FEPKHHWDIGENLGILDFDRAGKVSGARFV--------YYLGLGAQLER 175

Query: 278 TLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFAL 336
            + ++M    +K+ Y E+  P +++      +G +  ++  ++ V        +     L
Sbjct: 176 AVYNFMLDEHMKEGYTEVLPPYIVNADSMYGTGQFPKFKEGVYQV--------NGEDMTL 227

Query: 337 KPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHV 393
            P         +   +    ELPV +      +R+E   +     GL+R+  F + +   
Sbjct: 228 IPTAEVPLTNYYRGEVIPTEELPVYVTALTPSFRSEAGAAGRDTRGLIRMHQFNKVEMVK 287

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD----ALWDDAENIMK 449
           +   E  ++E  K+     +I K       ++ L+T       S+     LW  A+N  +
Sbjct: 288 YTKPENSWDELEKMTANAENILKKLNLPYHVITLTTGDMSFTASETHDLELWMPAQNKYR 347

Query: 450 GV 451
            V
Sbjct: 348 EV 349


>gi|226323189|ref|ZP_03798707.1| hypothetical protein COPCOM_00961 [Coprococcus comes ATCC 27758]
 gi|225208379|gb|EEG90733.1| hypothetical protein COPCOM_00961 [Coprococcus comes ATCC 27758]
          Length = 855

 Score = 64.8 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 30/139 (21%), Positives = 62/139 (44%), Gaps = 11/139 (7%)

Query: 62  ITPEDPRSLAVIR-HSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSDEL 119
           +T +  R +   R HS  H++ +A++++        G  ++D    +DF      + +EL
Sbjct: 528 LTVDSQRRVLCARNHSATHLLQKALRTVLGTHVEQSGSYVDDKRLRFDFSHFSAMTPEEL 587

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            ++E  + E I+R  P + + +  E+AR+         K          + V +   G++
Sbjct: 588 QKVEDMVNESISRSLPVVIKNMPIEEARKTGAQALFGEKY--------GDIVRVVNMGDY 639

Query: 180 -FDLCRGPHVRSTGQVKKF 197
             + C G HV +T ++  F
Sbjct: 640 SIEFCGGTHVANTSEIGAF 658


>gi|89897924|ref|YP_515034.1| seryl-tRNA synthetase [Chlamydophila felis Fe/C-56]
 gi|123483891|sp|Q255Z9|SYS_CHLFF RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|89331296|dbj|BAE80889.1| seryl tRNA synthetase [Chlamydophila felis Fe/C-56]
          Length = 426

 Score = 64.8 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 50/347 (14%), Positives = 107/347 (30%), Gaps = 54/347 (15%)

Query: 210 GDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWH 269
            D     + +  G+          +L   ++ +  D +   +       A    GV+   
Sbjct: 115 PDKTGNRVIKSVGSPSTFSFPPKHHLELNQKLQILDFKLPGKTSGSGWPAYKNRGVL--- 171

Query: 270 RKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
              W +   L   ++++    ++    P ++ + +   SG    +    + V+  D    
Sbjct: 172 -LEWALLTYL---LQKQQSHGFQLWLPPLLVKREILFGSGQIPKFDGQYYRVEDGD---- 223

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG---SLHGLMRVRGF 386
             ++  L P          +  + + ++LP+  A     +R E         GL+RV  F
Sbjct: 224 --QSLYLIPTAEVVLNGFHSQEIFNEKDLPIYYAACTPCFRREAGAAGAHERGLVRVHQF 281

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
            + +   F T EQ      K+ +++  I  +      +  LST       S  +  DAE 
Sbjct: 282 HKVEMFAFTTPEQADQAYEKMLSIVEEILTELKLPYRLSLLSTGDMSFTASKTI--DAEV 339

Query: 447 IMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF 506
            +                     G+ ++Y                     Q       R 
Sbjct: 340 WL--------------------PGQKSYY---------------EVSSISQCTDFQSRRS 364

Query: 507 NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI 553
              Y +S  +      ++ +   +   F+ I+ EN +      + P 
Sbjct: 365 ETRYKDSQGKMHFVHTLNGSGLATPRLFVAIL-ENNQQEDGSVIIPE 410


>gi|13470354|ref|NP_101920.1| alanyl-tRNA synthetase [Mesorhizobium loti MAFF303099]
 gi|20532259|sp|Q98NQ5|SYA_RHILO RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|14021093|dbj|BAB47706.1| alanyl-tRNA synthetase [Mesorhizobium loti MAFF303099]
          Length = 888

 Score = 64.8 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 31/140 (22%), Positives = 59/140 (42%), Gaps = 4/140 (2%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFS 115
            ++E+      R+     HS  H++ EA++ +        G  +  +   +D    +P S
Sbjct: 546 AAVELKVDHARRTRLRANHSATHLIHEALREVLGTHVAQKGSLVAPERLRFDISHNKPIS 605

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKAREL--FESKKEAYKVEILESIPAKENVTL 173
           ++EL ++E+   EI+ ++SP   + +S + A          E Y  E+            
Sbjct: 606 AEELEEVERMANEIVVQNSPVTTRLMSVDDAIAEGAMALFGEKYGDEVRVVSMGTGLHGA 665

Query: 174 YRQGEW-FDLCRGPHVRSTG 192
                +  +LC G HVR+TG
Sbjct: 666 KANRPYSVELCGGTHVRATG 685


>gi|326692251|ref|ZP_08229256.1| seryl-tRNA synthetase [Leuconostoc argentinum KCTC 3773]
          Length = 436

 Score = 64.8 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 67/188 (35%), Gaps = 16/188 (8%)

Query: 272 GWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G ++ + + ++M     ++ Y E+ TP V++      +G +  ++ + + V+    T   
Sbjct: 179 GARLERAVYNFMLDEHRQEGYTEMITPIVVNDTAMFGTGQYPKFQDDAYRVEGLAQT--- 235

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE---PSGSLHGLMRVRGFT 387
                  P         +        +LP++       +R E         GL+R+  F 
Sbjct: 236 -----YIPTAEVPLTNYYAGETIPSEDLPIKFTALSPSFRKEAGAAGKDTRGLIRLHQFN 290

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +   F   EQ + E   +     +I +  G    +V LST              +W  
Sbjct: 291 KVEMVKFTKPEQSYAELASMTANAENILQKLGLPYHVVMLSTGDMGFSAAKTYDIEVWMP 350

Query: 444 AENIMKGV 451
            + + + +
Sbjct: 351 QQKVYREI 358


>gi|311070660|ref|YP_003975583.1| seryl-tRNA synthetase [Bacillus atrophaeus 1942]
 gi|310871177|gb|ADP34652.1| seryl-tRNA synthetase [Bacillus atrophaeus 1942]
          Length = 425

 Score = 64.8 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 75/200 (37%), Gaps = 17/200 (8%)

Query: 261 DGSGVIFWHRKGWKIFQTLISYMRRKIKDDYE--EINTPQVLDQHLWQQSGHWDSYRANM 318
            GS  +F+   G ++ + L ++M     D+Y   E+  P ++++     +G    +  + 
Sbjct: 159 TGSRFVFYKGLGARLERALYNFMLDLHVDEYNYTEVIPPYMVNRASMTGTGQLPKFEEDA 218

Query: 319 FAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS-- 376
           F ++           + L P        +    + S   LP+  A F + +R+E   +  
Sbjct: 219 FKIR--------EEDYFLIPTAEVPITNMHRDEILSGESLPINYAAFSACFRSEAGSAGR 270

Query: 377 -LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
              GL+R   F + +   F   E  ++E  K+ N    + +       ++ + T      
Sbjct: 271 DTRGLIRQHQFNKVELVKFVKPEDSYDELEKLTNQAERVLQLLELPYRVMSMCTGDLGFT 330

Query: 436 ----GSDALWDDAENIMKGV 451
                   +W  +++  + +
Sbjct: 331 AAKKYDIEVWIPSQDTYREI 350


>gi|290967982|ref|ZP_06559531.1| serine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
 gi|290781888|gb|EFD94467.1| serine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
          Length = 424

 Score = 64.8 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 48/342 (14%), Positives = 109/342 (31%), Gaps = 40/342 (11%)

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           + Q+E    E         +   + E A  L E+ K+      ++     +     RQ +
Sbjct: 41  IQQVETMKNERNTVTQEISRLKRNKEDASALIEAMKKLGDTIAVQDKEIHQVAEALRQIQ 100

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
                    + +                  + DS  P + + +G   N      ++    
Sbjct: 101 L-------MIPNMCHPSVPVG---------KDDSQNPEVRK-WGEPTNFSFTPKEHWEIG 143

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEINT 296
           E     D  + A+          G+        G ++ + + ++M  +  +   Y E+  
Sbjct: 144 ENLGILDAERAAKVAGARFYYYIGA--------GARLERAVYNFMLDRHTEKDGYTEVIP 195

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P ++++     +G    +  +M+ ++       + +   L P         ++  +    
Sbjct: 196 PYIVNRKAMTGTGQLPKFSEDMYQLQV------EGQDMFLIPTAEVPLTNYYSGEILRAD 249

Query: 357 ELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           +LPV +      +R E   +     GL+R   F + +   + T E  ++E  K+      
Sbjct: 250 QLPVYVTALTPCFRAEAGSAGRDTRGLIRQHQFHKVEMVKYTTPESSYDELDKLTRNAED 309

Query: 414 IYKDFGFEKIMVKLSTRPEKRVG----SDALWDDAENIMKGV 451
           I K       +V L T              +W  A+   + +
Sbjct: 310 ILKALELPYHVVCLCTGDIGFSAAKTFDVEVWFPAQGKYREI 351


>gi|260597297|ref|YP_003209868.1| seryl-tRNA synthetase [Cronobacter turicensis z3032]
 gi|260216474|emb|CBA29619.1| Seryl-tRNA synthetase [Cronobacter turicensis z3032]
          Length = 430

 Score = 64.8 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 62/188 (32%), Gaps = 10/188 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M     +   Y E   P +++      +G    +  ++F  +  ++   D
Sbjct: 170 ARLHRALSQFMLDLHTEEHGYSENYVPYLVNHDTLYGTGQLPKFAGDLFHTRPLEEEA-D 228

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
              +AL P        +    +     LPV++      +R+E         GL+R+  F 
Sbjct: 229 SSNYALIPTAEVPLTNLVRDEIIDEETLPVKMTAHTPCFRSEAGSYGRDTRGLIRMHQFD 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E       ++      + +  G     V L +              +W  
Sbjct: 289 KVEMVQIVRPEDSMQALEEMTGHAEKVLQLLGLPYRKVLLCSGDMGFGARKTYDLEVWLP 348

Query: 444 AENIMKGV 451
           A++  + +
Sbjct: 349 AQDTYREI 356


>gi|46578654|ref|YP_009462.1| seryl-tRNA synthetase [Desulfovibrio vulgaris str. Hildenborough]
 gi|67461806|sp|Q72FH6|SYS_DESVH RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|46448065|gb|AAS94721.1| seryl-tRNA synthetase [Desulfovibrio vulgaris str. Hildenborough]
 gi|311232527|gb|ADP85381.1| seryl-tRNA synthetase [Desulfovibrio vulgaris RCH1]
          Length = 424

 Score = 64.8 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 44/342 (12%), Positives = 105/342 (30%), Gaps = 42/342 (12%)

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L ++E    E     +   K   + E A  L E        E ++++  +       Q +
Sbjct: 41  LTEVESLKSERNKASAEVAKAKRAGEDASALIERLG--GVSERIKALDLEAEAVKSEQND 98

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           W  +   P++      +   +   V    W             GT         ++    
Sbjct: 99  W--MLTIPNIPHESVPEGRDENDNVEVLRW-------------GTPRAFSFTPREHWDIG 143

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK--DDYEEINT 296
                 D  +  +                W     ++ + L +Y        + Y E+  
Sbjct: 144 VALGGLDFERAGKLAGSRFTVYWK-----W---AARLERALANYFLDTHISANGYTEVLP 195

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P ++++     +G    +  ++F ++  D        + L P        +    +    
Sbjct: 196 PFMVNRKTMTGTGQLPKFEEDLFRLESWD--------YFLIPTAEVPLTNLHADEILEEG 247

Query: 357 ELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           +LP+        +R+E         GL+R   FT+ +   F   E+ F+E  ++     +
Sbjct: 248 DLPLGYTAQTPCFRSEAGSYGKDTRGLIRQHQFTKVEMVRFAHPERSFDELERMRGHAEA 307

Query: 414 IYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
           + ++ G    ++ L +              +W   ++  + +
Sbjct: 308 LLQNLGLPYRVITLCSGDMGFSATKTYDLEVWLPGQDKYREI 349


>gi|194018062|ref|ZP_03056667.1| seryl-tRNA synthetase [Bacillus pumilus ATCC 7061]
 gi|194010254|gb|EDW19831.1| seryl-tRNA synthetase [Bacillus pumilus ATCC 7061]
          Length = 424

 Score = 64.8 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 73/200 (36%), Gaps = 17/200 (8%)

Query: 261 DGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANM 318
            GS  +F+   G ++ + L ++M     D   + E+  P ++++     +G    +  + 
Sbjct: 159 TGSRFVFYKGLGARLERALYNFMLDLHVDEFGFTEVLPPYMVNRASMTGTGQLPKFEEDA 218

Query: 319 FAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS-- 376
           F ++           + L P        +    +    +LP+  A F + +R+E   +  
Sbjct: 219 FKIR--------EEDYFLIPTAEVPITNMHRDEILEGEQLPINYAAFSACFRSEAGSAGR 270

Query: 377 -LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
              GL+R   F + +   F   E  + E  K+ N    + +       ++ + T      
Sbjct: 271 DTRGLIRQHQFNKVELVKFVRPEDSYEELEKLTNQAEKVLQLLNLPYRVMSMCTGDLGFT 330

Query: 436 ----GSDALWDDAENIMKGV 451
                   +W  +++  + +
Sbjct: 331 AAKKYDIEVWIPSQDTYREI 350


>gi|260814103|ref|XP_002601755.1| hypothetical protein BRAFLDRAFT_121181 [Branchiostoma floridae]
 gi|229287057|gb|EEN57767.1| hypothetical protein BRAFLDRAFT_121181 [Branchiostoma floridae]
          Length = 512

 Score = 64.8 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 48/304 (15%), Positives = 92/304 (30%), Gaps = 46/304 (15%)

Query: 275 IFQTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           + Q LI Y +R   +  Y  + TP  + + +  +      +   ++ V        D +T
Sbjct: 203 LEQALIQYALRILYEKGYTALYTPFFMKKDVMSEVAQLSQFDDELYKVIGKGSEKGDDQT 262

Query: 334 FALKP---MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFT 387
             +K     +     A          ELP++ A   + +R E         G+ RV  F 
Sbjct: 263 EDVKYLIATSEQPIAAYHRDEWMKPEELPIKYAGISTCFRQEVGSHGRDTRGIFRVHQFE 322

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENI 447
           + +  V    +  +    ++       YK  G    +V                    NI
Sbjct: 323 KVEQFVLSKPDDSWGLFHEMIGNAEEFYKTLGIPYRIV--------------------NI 362

Query: 448 MKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFN 507
           + G L+       D        G GAF              R+    +  +D+    R  
Sbjct: 363 VSGALNNAAAMKYD--LEAWFPGSGAF--------------RELVSCSNCLDYQ-ARRLL 405

Query: 508 AFYVNSHSEKCHPVMIHR--AVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAV 565
             Y  +      P  +H   A   +  R I  ++EN +    + +  +           +
Sbjct: 406 VRYGQTKKMNEKPEFVHMLNATMCATTRVICAILENHQTEEGIVIPEVLRQFMPGAIEFI 465

Query: 566 EYAQ 569
            + +
Sbjct: 466 PFVK 469


>gi|153869734|ref|ZP_01999269.1| alanyl-tRNA synthetase [Beggiatoa sp. PS]
 gi|152073804|gb|EDN70735.1| alanyl-tRNA synthetase [Beggiatoa sp. PS]
          Length = 357

 Score = 64.8 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 35/143 (24%), Positives = 60/143 (41%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFS 115
             ++     + R      HS  H++  A++ I  E     G ++E     +DF   +P +
Sbjct: 26  DQLQAQIDAEARQATARHHSATHLLHAALRQILGEHVKQKGSLVEPERLRFDFSHFEPIT 85

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           S++LA IE+ + E I  + P   + +S E+A           K          E V +  
Sbjct: 86  SEQLANIERLVNEQILLNIPVQTRLMSLEEAMNSGAMALFGEKY--------DEQVRVLS 137

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G++  +LC G HVR  G +  F
Sbjct: 138 MGDFSTELCGGTHVRQVGDIGLF 160


>gi|294011256|ref|YP_003544716.1| seryl-tRNA synthetase [Sphingobium japonicum UT26S]
 gi|292674586|dbj|BAI96104.1| seryl-tRNA synthetase [Sphingobium japonicum UT26S]
          Length = 425

 Score = 64.8 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 31/175 (17%), Positives = 61/175 (34%), Gaps = 15/175 (8%)

Query: 273 WKIFQTLISYM--RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M  R+  ++ YEE+N P ++       +G    +  ++F          D
Sbjct: 171 ARLHRALAQFMLDRQSRENGYEEVNPPLLVKDEALFGTGQLPKFAEDLFRTT-------D 223

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFT 387
            R     P        +    +     LP+RL      +R+E   +     G +R   F 
Sbjct: 224 GRWLI--PTAEVSLTNLVREQIVPTESLPLRLTALTPCFRSEAGSAGRDTRGFIRQHQFE 281

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWD 442
           + +    C  E+   E  ++      + +  G     + L T      G+   WD
Sbjct: 282 KVELVAICKPEESEAEHERMCAAAEGVLQALGLPYRKMLLCTGDMGF-GARKTWD 335


>gi|28899322|ref|NP_798927.1| alanyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|153839216|ref|ZP_01991883.1| alanyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
 gi|260878987|ref|ZP_05891342.1| alanine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|260895460|ref|ZP_05903956.1| alanine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
 gi|260903524|ref|ZP_05911919.1| alanine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
 gi|31076994|sp|Q87LR3|SYA_VIBPA RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|28807546|dbj|BAC60811.1| alanyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|149747281|gb|EDM58267.1| alanyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
 gi|308088224|gb|EFO37919.1| alanine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
 gi|308090433|gb|EFO40128.1| alanine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|308108704|gb|EFO46244.1| alanine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
 gi|328474145|gb|EGF44950.1| alanyl-tRNA synthetase [Vibrio parahaemolyticus 10329]
          Length = 860

 Score = 64.8 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 27/150 (18%), Positives = 60/150 (40%), Gaps = 10/150 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFS 115
             +  I   + R+   + HS  H++  A++ +  E     G +++ +   +DF   +  +
Sbjct: 545 DEVATIVDAERRAAISLNHSATHLLHAALRQVLGEHVTQKGSLVKAENLRFDFSHLEAVT 604

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           + EL ++E+ +   I R+       +  E A++         K          + V +  
Sbjct: 605 AAELKEVERLVNAQIRRNHVIETNVMDIESAKKKGAMALFGEKY--------DDEVRVLS 656

Query: 176 QGEW-FDLCRGPHVRSTGQVKKFFKLMKVA 204
            G++  +LC G H  +TG +  F    +  
Sbjct: 657 MGDFSTELCGGIHASNTGDIGLFKITSESG 686


>gi|28209854|ref|NP_780798.1| seryl-tRNA synthetase [Clostridium tetani E88]
 gi|46577248|sp|Q899T6|SYS_CLOTE RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|28202289|gb|AAO34735.1| seryl-tRNA synthetase [Clostridium tetani E88]
          Length = 426

 Score = 64.8 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 84/234 (35%), Gaps = 22/234 (9%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIF 276
           G +     E+ ++        E + H  L   +D+          GS   F+   G ++ 
Sbjct: 117 GDSDEDNVEIRRWGEATTFEFEPKAHWDLGVNLDILDFERAGKVTGSRFTFYKGLGARLE 176

Query: 277 QTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           + +I+Y      D   Y EI  P ++++     +G    +  + F +        + + +
Sbjct: 177 RAVINYYLDTHIDEHGYTEILPPYMVNRKSMTGTGQLPKFEEDAFRL--------EEQDY 228

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDA 391
            L P        ++   + +  +LP++   + + +R+E   +     GL+R   F + + 
Sbjct: 229 FLIPTAEVPVTNLYRDEILNGSDLPMKHVAYSACFRSEAGSAGRDTRGLVRQHQFNKVEL 288

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALW 441
             F   EQ + E  K+      + +  G    +V++                +W
Sbjct: 289 VKFTKPEQSYEELEKLTKDAEDVLQGLGIPYRVVRICKGDLGFTAALKYDIEVW 342


>gi|225572273|ref|ZP_03781137.1| hypothetical protein RUMHYD_00567 [Blautia hydrogenotrophica DSM
           10507]
 gi|225040257|gb|EEG50503.1| hypothetical protein RUMHYD_00567 [Blautia hydrogenotrophica DSM
           10507]
          Length = 868

 Score = 64.8 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 55/133 (41%), Gaps = 10/133 (7%)

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIAR 132
            HS  H++ +A++ +        G  +  D   +DF   Q  + +E+ ++EK + + I  
Sbjct: 554 NHSATHLLQKALKVVLGAHVEQKGSLVTPDRLRFDFAHFQAMTPEEMEKVEKLVNQEIQE 613

Query: 133 DSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRST 191
             P     +  E+A++         K          E V +   GE+  +LC G HV +T
Sbjct: 614 ALPVRTDIMDIEEAKKTGAMALFGEKY--------DEEVRVVSMGEFSKELCGGTHVSNT 665

Query: 192 GQVKKFFKLMKVA 204
            Q+  F  + +  
Sbjct: 666 SQILLFKLVSESG 678


>gi|332088847|gb|EGI93959.1| seryl-tRNA synthetase [Shigella boydii 5216-82]
          Length = 430

 Score = 64.8 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 64/188 (34%), Gaps = 10/188 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M     +   Y E   P +++Q     +G    +  ++F  +  ++   D
Sbjct: 170 ARMHRALSQFMLDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLFHTRPLEEEA-D 228

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
              +AL P        +    +    +LP+++      +R+E         GL+R+  F 
Sbjct: 229 TSNYALIPTAEVPLTNLVRGEIIDEDDLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFD 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E       ++      + +  G     + L T              +W  
Sbjct: 289 KVEMVQIVRPEDSMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMGFGACKTYDLEVWIP 348

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 349 AQNTYREI 356


>gi|322386507|ref|ZP_08060134.1| histidine--tRNA ligase [Streptococcus cristatus ATCC 51100]
 gi|321269426|gb|EFX52359.1| histidine--tRNA ligase [Streptococcus cristatus ATCC 51100]
          Length = 426

 Score = 64.8 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 68/427 (15%), Positives = 131/427 (30%), Gaps = 84/427 (19%)

Query: 269 HRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
             +    +Q L  + R+  K  +Y EI TP       ++          ++   +  D  
Sbjct: 13  LPQESAKWQYLEEFARKTFKKYNYAEIRTPIF---EHYEVISRSVGDTTDIVTKEMYDFY 69

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKS-----YRELPVRLAEFGSVYRNEPSGSLHGLMR 382
            K  R   L+P    G   V    +++       + PV+L   GS++R E   +     R
Sbjct: 70  DKGDRHITLRP---EGTAPVVRSYVENKLFAPEVQKPVKLYYMGSMFRYERPQA----GR 122

Query: 383 VRGFTQ------------DDAHVFCTKEQMFNE---------------------CLKIHN 409
           +R F Q             DA       Q F E                       +   
Sbjct: 123 LREFHQIGVECFGSENPATDAETIAMAAQFFKEIGIGQVTLQLNSLGNAASRAAYRQALI 182

Query: 410 LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA-------------------ENIMKG 450
             ++  KD   +    +L   P + + S    D A                      ++ 
Sbjct: 183 DYLTPLKDSLSKDSQRRLEENPLRVLDSKEKEDKAAVAQAPSILDFLDEESQEHFAAVRS 242

Query: 451 VLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFY 510
           +L+++       INT ++ G   +    FE+   D  G +           L   F    
Sbjct: 243 MLESLGVPYV--INTNMVRGLDYYNHTIFEFT-TDVAGSELTICAGGRYDGLVDYF---- 295

Query: 511 VNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQE 570
                    P          +ER + I+    +G    + + + A +  +  +A   A E
Sbjct: 296 -------GGPETPAFGFGMGMERLLLIL--EKQGAALPFETGLDAYIAVLGEAANRSALE 346

Query: 571 IANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
           +   L++   + E D+ +  +  + +     +   II  G+ E     + ++   +    
Sbjct: 347 LVQALRNQGFAAERDYLDRKLKAQFKSADAFRAKTIITLGESEIESNQVTVKNNETRQEV 406

Query: 631 KVSLLDA 637
            V L   
Sbjct: 407 VVGLNQV 413


>gi|313676999|ref|YP_004054995.1| alanyl-tRNA synthetase [Marivirga tractuosa DSM 4126]
 gi|312943697|gb|ADR22887.1| alanyl-tRNA synthetase [Marivirga tractuosa DSM 4126]
          Length = 876

 Score = 64.8 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 61/153 (39%), Gaps = 12/153 (7%)

Query: 56  EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGF-YYDFDKEQPF 114
           +  +      D R   V  HS  H++  A++ +  +     G ++ D    +DF      
Sbjct: 544 DAKVHAQIDNDRRRKIVYNHSATHLVHAALREVLGDHVQQKGSLVSDKLLRFDFSHFSKM 603

Query: 115 SSDELAQIEKKMQEIIARDSPF-LKQYLSHEKARELFESKKEAYKVEILESIPAKENVTL 173
           + +E+ ++E+++ E I  + P   ++ +  E+A+          K          + V +
Sbjct: 604 TDEEILKVERRVNEKIRENIPQQEERNIPIEEAKAKGAMALFGEKY--------GDTVRM 655

Query: 174 YRQGE--WFDLCRGPHVRSTGQVKKFFKLMKVA 204
                    +LC G HV +TG + +F    + +
Sbjct: 656 ITFDPNYSVELCGGVHVPATGNIGQFKITTETS 688


>gi|222111942|ref|YP_002554206.1| seryl-tRNA synthetase [Acidovorax ebreus TPSY]
 gi|254783024|sp|B9MEG7|SYS_ACIET RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|221731386|gb|ACM34206.1| seryl-tRNA synthetase [Acidovorax ebreus TPSY]
          Length = 442

 Score = 64.8 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 80/225 (35%), Gaps = 15/225 (6%)

Query: 242 EKRDHRKLAREMDL-FHIAEDGSGVIFWHRKG--WKIFQTLISYM--RRKIKDDYEEINT 296
             +DH  L   + L F +    SG  F   KG   ++ + L  +M   +  +  Y E   
Sbjct: 144 TPKDHVDLGEPLGLDFDMGVKLSGSRFTVMKGGIARLHRALAQFMLDVQTQEHGYTECYV 203

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK---DLRTFALKPMNCPGHVAVFNHGLK 353
           P V++    + +G    +  ++FA +      +   D     L P +           + 
Sbjct: 204 PYVVNADSLKGTGQLPKFEGDLFAAQKGGQDAEPVPDNAQLYLIPTSEVPLTNFVRDEVL 263

Query: 354 SYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
           +  +LP++L      +R+E         G++R   F + +       ++ +    ++   
Sbjct: 264 AEAQLPLKLTAHTPCFRSEAGSYGRDTRGMIRQHQFDKVEMVQIVHPDKSYEALEEMTRH 323

Query: 411 IISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
             ++ +  G    ++ L T              +W  A+N  + +
Sbjct: 324 AEAVLQKLGLPYRVMSLCTGDMGFGAAKTYDLEVWLPAQNTYREI 368


>gi|113461263|ref|YP_719332.1| alanyl-tRNA synthetase [Haemophilus somnus 129PT]
 gi|123132149|sp|Q0I426|SYA_HAES1 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|112823306|gb|ABI25395.1| alanyl-tRNA synthetase [Haemophilus somnus 129PT]
          Length = 874

 Score = 64.8 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 27/148 (18%), Positives = 64/148 (43%), Gaps = 10/148 (6%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSS 116
           +I  +   + R+   + HS  H++  A++ +        G ++ D    +DF + +    
Sbjct: 546 TINAVVDTEHRTKTSLNHSATHLLHAALRQVLGTHVAQKGSLVSDTILRFDFAQPEAIRQ 605

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
           ++L +IE  + + I  +   + + +  ++A+          K          + V + + 
Sbjct: 606 EQLFEIECLVNQHIRANHLVVTEVMPIDEAKAKGAMALFGEKY--------GDVVRVVKM 657

Query: 177 GEW-FDLCRGPHVRSTGQVKKFFKLMKV 203
           GE+  +LC G HV+ TG++  F  + + 
Sbjct: 658 GEFSIELCGGIHVKRTGEIGLFKIVSES 685


>gi|82777585|ref|YP_403934.1| seryl-tRNA synthetase [Shigella dysenteriae Sd197]
 gi|309784010|ref|ZP_07678654.1| seryl-tRNA synthetase [Shigella dysenteriae 1617]
 gi|123769580|sp|Q32E12|SYS_SHIDS RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|81241733|gb|ABB62443.1| serine tRNA synthetase; also charges selenocystein tRNA with serine
           [Shigella dysenteriae Sd197]
 gi|308928153|gb|EFP73616.1| seryl-tRNA synthetase [Shigella dysenteriae 1617]
          Length = 430

 Score = 64.8 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 64/188 (34%), Gaps = 10/188 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M     +   Y E   P +++Q     +G    +  ++F  +  ++   D
Sbjct: 170 ARMHRALSQFMLDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLFHTRPLEEEA-D 228

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
              +AL P        +    +    +LP+++      +R+E         GL+R+  F 
Sbjct: 229 TSNYALIPTAEVPLTNLVRGEIIDEDDLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFD 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E       ++      + +  G     + L T              +W  
Sbjct: 289 KVEMVQIVRPEDSMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMGFGACKTYDLEVWIP 348

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 349 AQNTYREI 356


>gi|323439689|gb|EGA97407.1| seryl-tRNA synthetase [Staphylococcus aureus O11]
          Length = 428

 Score = 64.8 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 51/357 (14%), Positives = 123/357 (34%), Gaps = 35/357 (9%)

Query: 106 YDFDKEQPFSSDELAQIEKKMQEIIA--RDSPFLKQYLSHEKARELFESKKEAYKVEILE 163
            +   + P   DE+ +++++ +++I+   +    +  +S E A +    +     +  + 
Sbjct: 18  IELRGDDPKVVDEILELDEQRRKLISATEEMKARRNKVSEEIALKKRNKENADDVIAEMR 77

Query: 164 SIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
           ++   +      Q    D       +  G + +   L+         D +   + + +GT
Sbjct: 78  TL-GDDIKEKNSQLNEIDN------KMIGILCRIPNLISDDVPQGESDEDNVEVKK-WGT 129

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYM 283
                 E   +   +EE +  D  + A+      +             G ++ + L++YM
Sbjct: 130 PREFSFEPKAHWDIVEELKMADFDRAAKVSGARFVYLTNE--------GAQLERALMNYM 181

Query: 284 RRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
             K   +  Y E+  PQ+++      +G    +  ++F V        +       P   
Sbjct: 182 ITKHTTQHGYTEMMVPQLVNADTMYGTGQLPKFEEDLFKV--------EKEGLYTIPTAE 233

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKE 398
                 + + +     LP +     + +R+E   +     GL+R+  F + +   F   E
Sbjct: 234 VPLTNFYRNEIIQPGVLPEKFTGQSACFRSEAGSAGRDTRGLIRLHQFDKVEMVRFEQPE 293

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
             +N   ++     +I ++ G     V L T              +W  + N  K +
Sbjct: 294 DSWNALEEMTTNAEAILEELGLPYRRVILCTGDIGFSASKTYDLEVWLPSYNDYKEI 350


>gi|320155348|ref|YP_004187727.1| alanyl-tRNA synthetase [Vibrio vulnificus MO6-24/O]
 gi|319930660|gb|ADV85524.1| alanyl-tRNA synthetase [Vibrio vulnificus MO6-24/O]
          Length = 860

 Score = 64.8 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 59/143 (41%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFS 115
             +  I   + R+   + HS  H++  A++ +  E     G +++ +   +DF   +  +
Sbjct: 545 DQVSAIVDAERRAAISLNHSATHLLHAALRQVLGEHVAQKGSLVKAENLRFDFSHLEAVT 604

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           + EL ++E+ +   I R+       +  E A++         K          + V +  
Sbjct: 605 AAELKEVERLVNAQIRRNHAIETNIMDIESAKQKGAMALFGEKY--------DDEVRVLS 656

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G++  +LC G H  +TG +  F
Sbjct: 657 MGDFSTELCGGIHASNTGDIGLF 679


>gi|269986881|gb|EEZ93158.1| Glycine--tRNA ligase [Candidatus Parvarchaeum acidiphilum ARMAN-4]
          Length = 488

 Score = 64.8 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 57/320 (17%), Positives = 101/320 (31%), Gaps = 26/320 (8%)

Query: 335 ALKPMNCPGHVAVFNHGLKSY-RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
            L+P  C      F    + Y ++ P+ +A+ G  +RNE S   + L+R R F Q+D  +
Sbjct: 161 YLRPEACQSIFLDFKRIFEVYGKKFPMVIAQVGKAFRNEISPR-NTLLRQREFYQNDIEI 219

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
           F T++    +      +     K      I   LS    K   +       +  +  V  
Sbjct: 220 FFTEDNFNLDNDYEIKIYDKEDKSIDKISIKDALSKGIIKSNVTAYGISKIQEFLLRV-- 277

Query: 454 TIKNSSQDRINTGVLLGEGAFYGP---KFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAF 509
                  + I    L  + AFY       E   +D+      C      D     ++ A 
Sbjct: 278 ---GFKDEEIRYRKLYEDKAFYSKESFDIEIKKQDSWVELVACNNRGEHDLLSYEKYGAK 334

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN--FKGNLPLWLS------PIQAIVTTIT 561
            +           I        +R   +++ +   K +   W S      P +A +  + 
Sbjct: 335 GLRIEGNIPQIFEISMG----TDRLFYLLLFSSFRKDDQRSWFSMNSAVSPYKAAIFPLV 390

Query: 562 SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
           S      +  A    S H +        +I  + R      I I          + +I +
Sbjct: 391 SKDNLDVKAKAMFESSMHKNNILYSETGSIGKRYRRAEEVGIKIAFTVDYDTVEDGTITV 450

Query: 622 RRFGSTTTQKVS---LLDAI 638
           R   S    ++S   L   I
Sbjct: 451 RESDSMKQFRISSNNLDRFI 470


>gi|308179597|ref|YP_003923725.1| serine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ST-III]
 gi|308045088|gb|ADN97631.1| serine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ST-III]
          Length = 423

 Score = 64.8 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 38/241 (15%), Positives = 86/241 (35%), Gaps = 25/241 (10%)

Query: 210 GDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWH 269
            D +  +  R +G     + +   +    E     D  + A+      +    +      
Sbjct: 116 PDEDSNVEMRKHGDIPTFEFKPKAHWELGESLGILDFDRAAKVAGARFVYYKDA------ 169

Query: 270 RKGWKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
             G  + + + S+M      K  Y EI  P +++      +G +  ++ +++ V+ +  T
Sbjct: 170 --GALLERAVYSFMLDLHIQKQGYHEIIPPYLVNAQTMYGTGQFPKFKEDVYTVESSGMT 227

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVR 384
           +         P         + + + S  +LP         YR+E   +     GL+R+ 
Sbjct: 228 LI--------PTAEVPLTNYYANEILSEDQLPTYFTAMTPCYRSEAGSAGRDTRGLIRMH 279

Query: 385 GFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDAL 440
            F + +   +C  E  ++E  K+ +    + ++ G    ++KLST              +
Sbjct: 280 QFHKVEMVKYCKPENSYDELEKLTDNAEEVLRELGLAYHVIKLSTGDTGFSSAKTYDVEV 339

Query: 441 W 441
           W
Sbjct: 340 W 340


>gi|261872054|gb|ACY02861.1| seryl-tRNA synthetase 2 [Streptomyces sp. ATCC 700974]
          Length = 428

 Score = 64.8 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 35/218 (16%), Positives = 75/218 (34%), Gaps = 12/218 (5%)

Query: 213 NRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDG----SGVIFW 268
                  +      + + L ++      S   DH  +A+E  L           +G   +
Sbjct: 105 PNLPADDVVAGGKESNRVLREWGTKPTLSPVVDHTTVAKEYGLVDFDRGTKLGGAGYWMY 164

Query: 269 HRKGWKIFQTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
              G ++   L+++ + + I   Y  +  P +L +     +G +  +R +++ +   D  
Sbjct: 165 TGYGARLEWALLNWFIDQHIAAGYTFLLPPHMLLESAGFAAGQFPKFRDDVYHIANPDSH 224

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVR 384
               R   L P +    +      + +  +LP R   +   YR E +G+     G +R  
Sbjct: 225 ----RPQFLLPTSETAILGAHQDEIFAEADLPHRAFAYTPCYRRERAGAHSDERGTVRGH 280

Query: 385 GFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
            F + +   F T E        +     S+ +  G   
Sbjct: 281 QFNKVEIFQFTTPEGAPAAFDAMVRQAESLLEGLGLHY 318


>gi|240949608|ref|ZP_04753943.1| seryl-tRNA synthetase [Actinobacillus minor NM305]
 gi|240295866|gb|EER46542.1| seryl-tRNA synthetase [Actinobacillus minor NM305]
          Length = 435

 Score = 64.8 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 62/190 (32%), Gaps = 11/190 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK--CADDTI 328
            ++ + L  +M     +   Y E N P +++      +G    +  ++F  +     D  
Sbjct: 171 ARLHRALSQFMLDLHTEQHGYVETNVPFLVNHDTLFGTGQLPKFGEDLFHTQPLTGQDPN 230

Query: 329 KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRG 385
           +  R F+L P        +    +     LP+R       +R+E         GL+R+  
Sbjct: 231 ETQRPFSLIPTAEVPVTNLVRDEIIDEETLPLRYTAHTPCFRSEAGSYGRDTRGLIRMHQ 290

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALW 441
           F + +       E+      ++      + +        V L T              +W
Sbjct: 291 FEKVEMVQIVAPEKSMEALEELTGHAEKVLQLLNLPYRKVLLCTGDMGFGSAKTYDLEVW 350

Query: 442 DDAENIMKGV 451
             A+N  + +
Sbjct: 351 LPAQNTYREI 360


>gi|149184401|ref|ZP_01862719.1| AlaS, alanyl-tRNA synthetase [Erythrobacter sp. SD-21]
 gi|148831721|gb|EDL50154.1| AlaS, alanyl-tRNA synthetase [Erythrobacter sp. SD-21]
          Length = 887

 Score = 64.8 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 27/148 (18%), Positives = 58/148 (39%), Gaps = 1/148 (0%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFS 115
            ++      + R      HS  H++  A+++         G ++ +D F +DF   +P S
Sbjct: 547 DAVHFEIDAERRDRIRANHSATHLVHAALRNRLGGHVTQKGSLVSDDRFRFDFSHPKPLS 606

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            +++A IE ++ E I  +     + ++ + A           K      + +        
Sbjct: 607 DEDIAAIEAEVNEEIRANETVGTRLMTPDDAVAAGALALFGEKYGDEVRVLSMGRKGGEG 666

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLMKV 203
           +    +LC G HV +TG +  F  + + 
Sbjct: 667 KNYSVELCGGTHVEATGDIGLFKIVSES 694


>gi|237809053|ref|YP_002893493.1| seryl-tRNA synthetase [Tolumonas auensis DSM 9187]
 gi|259516216|sp|C4L937|SYS_TOLAT RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|237501314|gb|ACQ93907.1| seryl-tRNA synthetase [Tolumonas auensis DSM 9187]
          Length = 432

 Score = 64.4 bits (155), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 68/190 (35%), Gaps = 11/190 (5%)

Query: 273 WKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMF--AVKCADDTI 328
            ++ + L  +M      +  Y E   P +++      +G    +  ++F  A+    D  
Sbjct: 170 ARMHRALAQFMLDLHTQQHGYTECYVPYLVNADSLLGTGQLPKFAEDLFHTAINGEGDEE 229

Query: 329 KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRG 385
             +R F+L P        +    +   + LPV++      +R+E         GL+R+  
Sbjct: 230 GKVRKFSLIPTAEVPLTNIARDEIYDEKALPVKMTAHSPCFRSEAGSYGRDTRGLIRMHQ 289

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALW 441
           F + +       E+ ++   ++      + +  G    +V L T              +W
Sbjct: 290 FDKVEMVQLVHPEKSWDALEEMVGHAEKVLQLLGLPYRVVSLCTGDMGFSAAKTYDLEVW 349

Query: 442 DDAENIMKGV 451
             A+N  + +
Sbjct: 350 LPAQNTYREI 359


>gi|170769264|ref|ZP_02903717.1| seryl-tRNA synthetase [Escherichia albertii TW07627]
 gi|170121916|gb|EDS90847.1| seryl-tRNA synthetase [Escherichia albertii TW07627]
          Length = 430

 Score = 64.4 bits (155), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 64/188 (34%), Gaps = 10/188 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M     +   Y E   P +++Q     +G    +  ++F  +  ++   D
Sbjct: 170 ARMHRALSQFMLDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLFHTRPLEEEA-D 228

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
              +AL P        +    +    +LP+++      +R+E         GL+R+  F 
Sbjct: 229 TSNYALIPTAEVPLTNLVRGEIIDEDDLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFD 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E       ++      + +  G     + L T              +W  
Sbjct: 289 KVEMVQIVRPEDSMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMGFGACKTYDLEVWIP 348

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 349 AQNTYREI 356


>gi|187730384|ref|YP_001880909.1| seryl-tRNA synthetase [Shigella boydii CDC 3083-94]
 gi|238691690|sp|B2TUI5|SYS_SHIB3 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|187427376|gb|ACD06650.1| seryl-tRNA synthetase [Shigella boydii CDC 3083-94]
          Length = 430

 Score = 64.4 bits (155), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 64/188 (34%), Gaps = 10/188 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M     +   Y E   P +++Q     +G    +  ++F  +  ++   D
Sbjct: 170 ARMHRALSQFMLDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLFHTRPLEEEA-D 228

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
              +AL P        +    +    +LP+++      +R+E         GL+R+  F 
Sbjct: 229 TSNYALIPTAEVPLTNLVRGEIIDEDDLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFD 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E       ++      + +  G     + L T              +W  
Sbjct: 289 KVEMVQIVRPEDSMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMGFGACKTYDLEVWIP 348

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 349 AQNTYREI 356


>gi|330998357|ref|ZP_08322181.1| serine--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
 gi|329568463|gb|EGG50268.1| serine--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
          Length = 429

 Score = 64.4 bits (155), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 76/214 (35%), Gaps = 20/214 (9%)

Query: 245 DHRKLAREMDLFHIA----EDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQV 299
            H +LA++ +L          G+G   +  KG ++ + LI++ +    K  YEEI  P V
Sbjct: 143 PHWELAKKYNLIDFDLGVKITGAGFPVYRGKGARLQRALINFFLDEARKSGYEEIMPPTV 202

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           +++           Y       K       +L  F L P        ++   +   ++LP
Sbjct: 203 VNE--------ASGYGTGQLPDKEGQMYHCNLDNFYLIPTAEVPVTNIYRDVILDEKDLP 254

Query: 360 VRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           V+   +   +R E       + GL R+  F++ +       E       ++   +  + +
Sbjct: 255 VKNCAYTQCFRREAGSYGKDVRGLNRLHEFSKVEIVRIDKPEHSEQSHQEMLAHVEGLLQ 314

Query: 417 DFGFEKIMVKLSTRPEKRV----GSDALWDDAEN 446
                  +++L                ++ +A+ 
Sbjct: 315 KLELPYRILRLCGGDMSFTSSICYDFEVYSEAQK 348


>gi|238916897|ref|YP_002930414.1| alanyl-tRNA synthetase [Eubacterium eligens ATCC 27750]
 gi|238872257|gb|ACR71967.1| alanyl-tRNA synthetase [Eubacterium eligens ATCC 27750]
          Length = 880

 Score = 64.4 bits (155), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 59/132 (44%), Gaps = 10/132 (7%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKM 126
           R+     HS  H++ +A++ +  +     G  ++ D   +DF   Q  + +E+A++E  +
Sbjct: 559 RADTCKNHSATHLLQKALRIVLGDHVEQKGSYVDPDRLRFDFTHFQSMTKEEIAKVEDIV 618

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRG 185
            E IA   P +   ++ E+A++         K          E V +   G++  + C G
Sbjct: 619 NEKIAEAIPVVTDVMTIEEAKKTGAMALFGEKY--------GEKVRVVAMGDFSKEFCGG 670

Query: 186 PHVRSTGQVKKF 197
            HV +T  ++ F
Sbjct: 671 THVANTANIRLF 682


>gi|197284276|ref|YP_002150148.1| alanyl-tRNA synthetase [Proteus mirabilis HI4320]
 gi|227357820|ref|ZP_03842168.1| alanyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
 gi|194681763|emb|CAR40964.1| alanyl-tRNA synthetase [Proteus mirabilis HI4320]
 gi|227161930|gb|EEI46948.1| alanyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
          Length = 875

 Score = 64.4 bits (155), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 34/162 (20%), Positives = 65/162 (40%), Gaps = 11/162 (6%)

Query: 45  GKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGF 104
           GKV   S  V      +I      ++  + HS  H++  A++ +        G ++ D +
Sbjct: 535 GKVISGSFIVNHKINAVIDVARRDAIR-LNHSATHLLHAALRQVLGTHVTQKGSLVNDKY 593

Query: 105 -YYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE 163
             +DF   +    ++L +IE  +   I  +SP + + +  E A++         K E   
Sbjct: 594 LRFDFSHFEAVKPEQLREIEDIVNAQIRLNSPVVTELMDLEDAKQKGAMALFGEKYE--- 650

Query: 164 SIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKFFKLMKVA 204
                E V +   G++  +LC G H   TG +  F  + +  
Sbjct: 651 -----ERVRVLTMGDFSTELCGGTHAARTGDIGLFRIMSESG 687


>gi|56963341|ref|YP_175072.1| histidyl-tRNA synthetase [Bacillus clausii KSM-K16]
 gi|81678918|sp|Q5WHP4|SYH1_BACSK RecName: Full=Histidyl-tRNA synthetase 1; AltName:
           Full=Histidine--tRNA ligase 1; Short=HisRS 1
 gi|56909584|dbj|BAD64111.1| histidyl-tRNA synthetase [Bacillus clausii KSM-K16]
          Length = 426

 Score = 64.4 bits (155), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 62/420 (14%), Positives = 132/420 (31%), Gaps = 55/420 (13%)

Query: 269 HRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
                 I+Q +    +   +   Y+EI TP        +          ++   +    +
Sbjct: 13  LPDDAAIWQYIEQVAKETCETYHYQEIRTPIF---EHTEIFSRGVGDTTDIVQKEMYTFS 69

Query: 328 IKDLRTFALKPMNCPGHVAVF-NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
            +  R+  L+P      V  + NH L +    P +L   G ++R E   +     R+R F
Sbjct: 70  DRGGRSLTLRPEGTAAVVRSYVNHKLYASPAQPTKLYYTGPMFRYERPQA----GRMRQF 125

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG--------------FEKIMVKLSTRPE 432
            Q       +     +   ++  L+I+I K  G                +   + +    
Sbjct: 126 VQFGVEALGSASPQLDA--EVLALLIAICKKLGLVNLKLVINSLGDSESRQAHREALIAH 183

Query: 433 KRVGSDALWDDAENIMKG----VLDTIKNSSQDR-------INTGVLLGEGAFYGPK--- 478
            +   D    D +  ++     +LD  K+            ++         F   K   
Sbjct: 184 FKPSIDEFCSDCQMRLEKNPLRILDCKKDREHPLMATAPSILDYLNEESRAYFQSLKETL 243

Query: 479 ----FEYILKDAI--GRDWQCGTIQVDFNLPSRFNAFYVNSHS--------EKCHPVMIH 524
                 Y++   +  G D+   T     +    F A               E   P    
Sbjct: 244 DLLNIPYVVDPTLVRGLDYYNHTAFELLSTAPGFGAITTLCGGGRYNGLVQEFGGPETPG 303

Query: 525 RAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIET 584
                SIERF  I+    +         + A V T+   A     ++   L+   +  + 
Sbjct: 304 IGFAFSIERF--ILAMKAENVDLPVPQSLDAYVVTLGDEASRLGPQLLQRLRDGGIRADK 361

Query: 585 DFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           D+  + +  +++     +    II G+ E +++   +++  +     V++ D    L ++
Sbjct: 362 DYLGKKMKAQLKAADRYQASYTIIIGEDEIAKQQALVKQMATGEQTVVAISDLTSFLQEQ 421


>gi|193070743|ref|ZP_03051678.1| seryl-tRNA synthetase [Escherichia coli E110019]
 gi|192955936|gb|EDV86404.1| seryl-tRNA synthetase [Escherichia coli E110019]
          Length = 430

 Score = 64.4 bits (155), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 64/188 (34%), Gaps = 10/188 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M     +   Y E   P +++Q     +G    +  ++F  +  ++   D
Sbjct: 170 ARMHRALSQFMLDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLFHTRPLEEEA-D 228

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
              +AL P        +    +    +LP+++      +R+E         GL+R+  F 
Sbjct: 229 TSNYALIPTAEVPLTNLVRGEIIDEDDLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFD 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E       ++      + +  G     + L T              +W  
Sbjct: 289 KVEMVQIVRPEDSMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMGFGACKTYDLEVWIP 348

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 349 AQNTYREI 356


>gi|125973847|ref|YP_001037757.1| histidyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|256004300|ref|ZP_05429282.1| histidyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|281418008|ref|ZP_06249028.1| histidyl-tRNA synthetase [Clostridium thermocellum JW20]
 gi|166227964|sp|A3DF35|SYH_CLOTH RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|125714072|gb|ABN52564.1| histidyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|255991734|gb|EEU01834.1| histidyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|281409410|gb|EFB39668.1| histidyl-tRNA synthetase [Clostridium thermocellum JW20]
 gi|316939956|gb|ADU73990.1| histidyl-tRNA synthetase [Clostridium thermocellum DSM 1313]
          Length = 417

 Score = 64.4 bits (155), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 68/197 (34%), Gaps = 16/197 (8%)

Query: 446 NIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSR 505
             +K  L+ +      +I+  ++ G   +    FE+ + D IG                R
Sbjct: 236 EGLKAGLENLGIDY--KIDKNIVRGLDYYTKTVFEF-VSDNIGAQGTVCG-------GGR 285

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAV 565
           ++        +    +     +    ER + +M EN     P    P    +  I   A 
Sbjct: 286 YDGLVEACGGKPTPGIGFAMGL----ERLLMVM-ENQGIKFPESKKPD-IFIAAIGDKAN 339

Query: 566 EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
            YA+++   L+   LS E D   +++  +++          I  GD E       ++   
Sbjct: 340 SYAEKMVYELRKEGLSAEKDLMGKSLKAQMKYADKLGAKYSIALGDDEIESGKAVLKNME 399

Query: 626 STTTQKVSLLDAIPILT 642
           +   +++SL   I  L 
Sbjct: 400 TGEQKEISLDTLISRLK 416


>gi|326561007|gb|EGE11372.1| seryl-tRNA synthetase [Moraxella catarrhalis 7169]
          Length = 422

 Score = 64.4 bits (155), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 67/188 (35%), Gaps = 16/188 (8%)

Query: 273 WKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            K+ + L+ +M      K  Y E+  P +++    Q +G    +  ++F +       + 
Sbjct: 170 AKLNRALVQFMLDTHTQKYGYTEMYVPYMVNSDSLQGTGQLPKFEEDLFKL-------RG 222

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFT 387
            + + L P +           + S R+LP++L      +R+E   +     GL+R   F 
Sbjct: 223 EKEYYLIPTSEVPLTNSVRDTILSPRDLPIKLTAHTPCFRSEAGSAGRDTRGLIRQHQFE 282

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       +       ++      + +       ++ L T              +W  
Sbjct: 283 KVEMVQVTRADSSMQALEQMTAQAEYVLQALELPYRVMTLCTGDMGFSAVKTYDIEVWLP 342

Query: 444 AENIMKGV 451
           ++N+ + +
Sbjct: 343 SQNMYREI 350


>gi|218258080|ref|ZP_03474507.1| hypothetical protein PRABACTJOHN_00161 [Parabacteroides johnsonii
           DSM 18315]
 gi|218225799|gb|EEC98449.1| hypothetical protein PRABACTJOHN_00161 [Parabacteroides johnsonii
           DSM 18315]
          Length = 875

 Score = 64.4 bits (155), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 59/156 (37%), Gaps = 13/156 (8%)

Query: 44  NGKVCDLSDPVREGSIEIITPEDPRSLAV---IRHSCAHIMAEAVQSIWPEVQVAIGPII 100
           N     L   + +      T +      +     HS  H++ EA++ +        G  +
Sbjct: 529 NNLPVHLVAKLPKDVTVTFTAKINEKKRIQCECNHSATHLLHEALREVLGTHVEQKGSYV 588

Query: 101 E-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFL-KQYLSHEKARELFESKKEAYK 158
             D   +DF   Q  + +E+ ++EK + E I  + P    + +   +A+ L        K
Sbjct: 589 SPDSLRFDFSHFQKVTDEEIRKVEKLVSEKIRANYPLEEHRNMPIAEAKALGAMALFGEK 648

Query: 159 VEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQV 194
                     + V + + G   +LC G H+ +TG +
Sbjct: 649 Y--------GDEVRVVKYGNSIELCGGTHIPATGMI 676


>gi|77917941|ref|YP_355756.1| seryl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
 gi|123575016|sp|Q3A7Q8|SYS_PELCD RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|77544024|gb|ABA87586.1| seryl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
          Length = 423

 Score = 64.4 bits (155), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 42/244 (17%), Positives = 89/244 (36%), Gaps = 22/244 (9%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAEDGSG----VIFWHRKGWKIF 276
           GT+ +  +E+ ++    E   E + H  +   +D+      G         +   G ++ 
Sbjct: 113 GTSEDDNKEVRRWGQVPEFDFEAQSHWDIGERLDILDFERAGKLAGARFAIYKGAGARLE 172

Query: 277 QTLISYMRRKIKDD--YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           + LI++M      +  Y EI  P ++++     +G    + +++F +   D        F
Sbjct: 173 RALINFMLDLHTGEHKYVEILPPLMVNRDTMTGTGQLPKFESDLFHLDDPD--------F 224

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDA 391
            L P        +    + +  +LPV  A +   +R E         GL+R+  F + + 
Sbjct: 225 FLIPTAEVPVTNIHRDEILADGDLPVCYAAYTPCFRKEAGSHGRDTRGLIRMHQFNKVEL 284

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE----KRVGSDALWDDAENI 447
             F   E+   E LK+ +    + +       +V L T        R     +W   +  
Sbjct: 285 VKFARPEESDQELLKLLDNAEEVLRRLKLPYRVVDLCTGDIGFSAARTFDIEVWLPGQQT 344

Query: 448 MKGV 451
            + +
Sbjct: 345 FREI 348


>gi|15605462|ref|NP_220248.1| seryl-tRNA synthetase [Chlamydia trachomatis D/UW-3/CX]
 gi|76789469|ref|YP_328555.1| seryl-tRNA synthetase [Chlamydia trachomatis A/HAR-13]
 gi|237803159|ref|YP_002888353.1| seryl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT]
 gi|237805080|ref|YP_002889234.1| seryl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|255311560|ref|ZP_05354130.1| seryl-tRNA synthetase [Chlamydia trachomatis 6276]
 gi|255317861|ref|ZP_05359107.1| seryl-tRNA synthetase [Chlamydia trachomatis 6276s]
 gi|8928371|sp|O84734|SYS_CHLTR RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|123606634|sp|Q3KKW5|SYS_CHLTA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|3329186|gb|AAC68324.1| Seryl tRNA Synthetase [Chlamydia trachomatis D/UW-3/CX]
 gi|76167999|gb|AAX51007.1| seryl-tRNA synthetase [Chlamydia trachomatis A/HAR-13]
 gi|231273380|emb|CAX10295.1| seryl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|231274393|emb|CAX11188.1| seryl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT]
 gi|296437204|gb|ADH19374.1| seryl-tRNA synthetase [Chlamydia trachomatis G/11222]
 gi|297748860|gb|ADI51406.1| Seryl-tRNA synthetase [Chlamydia trachomatis D-EC]
 gi|297749740|gb|ADI52418.1| Seryl-tRNA synthetase [Chlamydia trachomatis D-LC]
          Length = 428

 Score = 64.4 bits (155), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 39/249 (15%), Positives = 82/249 (32%), Gaps = 20/249 (8%)

Query: 210 GDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWH 269
            D     + + +G           ++   E  +  D +  A+       A    GV+   
Sbjct: 115 PDKTGNQVIKGHGEVPTFPFPPKHHMQLNEALQILDFKLPAKTTGSGWPAYCNEGVL--- 171

Query: 270 RKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
              W +   L++   ++    ++    P ++ + +   SG    +    + V+  D    
Sbjct: 172 -LEWALLTYLLN---KQQAHGFQLWLPPLLVKRDILFGSGQIPKFDGQYYRVEDGD---- 223

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG---SLHGLMRVRGF 386
             ++  L P          +  + + ++LP+  A F   +R E         GL+RV  F
Sbjct: 224 --QSLFLIPTAEVVLNGFHSQEILNEQDLPLCYAAFTPCFRREAGAGGAHERGLVRVHQF 281

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG----SDALWD 442
            + +   F T EQ      K+ +++  I  +      +  LST              +W 
Sbjct: 282 HKVEMFAFTTPEQEEVVYQKMLHVVEEILSELQLPYQLSLLSTGDMSFTAKKTIDAEVWL 341

Query: 443 DAENIMKGV 451
             +     V
Sbjct: 342 PGQKAFYEV 350


>gi|15830232|ref|NP_309005.1| seryl-tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
 gi|16128860|ref|NP_415413.1| seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with
           serine [Escherichia coli str. K-12 substr. MG1655]
 gi|24112268|ref|NP_706778.1| seryl-tRNA synthetase [Shigella flexneri 2a str. 301]
 gi|26246919|ref|NP_752959.1| seryl-tRNA synthetase [Escherichia coli CFT073]
 gi|30062380|ref|NP_836551.1| seryl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|74311451|ref|YP_309870.1| seryl-tRNA synthetase [Shigella sonnei Ss046]
 gi|82543379|ref|YP_407326.1| seryl-tRNA synthetase [Shigella boydii Sb227]
 gi|89107743|ref|AP_001523.1| seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with
           serine [Escherichia coli str. K-12 substr. W3110]
 gi|91209938|ref|YP_539924.1| seryl-tRNA synthetase [Escherichia coli UTI89]
 gi|110641093|ref|YP_668823.1| seryl-tRNA synthetase [Escherichia coli 536]
 gi|110804894|ref|YP_688414.1| seryl-tRNA synthetase [Shigella flexneri 5 str. 8401]
 gi|117623077|ref|YP_851990.1| seryl-tRNA synthetase [Escherichia coli APEC O1]
 gi|157157556|ref|YP_001462091.1| seryl-tRNA synthetase [Escherichia coli E24377A]
 gi|157160416|ref|YP_001457734.1| seryl-tRNA synthetase [Escherichia coli HS]
 gi|168752125|ref|ZP_02777147.1| seryl-tRNA synthetase [Escherichia coli O157:H7 str. EC4113]
 gi|168756984|ref|ZP_02781991.1| seryl-tRNA synthetase [Escherichia coli O157:H7 str. EC4401]
 gi|168762973|ref|ZP_02787980.1| seryl-tRNA synthetase [Escherichia coli O157:H7 str. EC4501]
 gi|168769886|ref|ZP_02794893.1| seryl-tRNA synthetase [Escherichia coli O157:H7 str. EC4486]
 gi|168776256|ref|ZP_02801263.1| seryl-tRNA synthetase [Escherichia coli O157:H7 str. EC4196]
 gi|168783803|ref|ZP_02808810.1| seryl-tRNA synthetase [Escherichia coli O157:H7 str. EC4076]
 gi|168787321|ref|ZP_02812328.1| seryl-tRNA synthetase [Escherichia coli O157:H7 str. EC869]
 gi|168801425|ref|ZP_02826432.1| seryl-tRNA synthetase [Escherichia coli O157:H7 str. EC508]
 gi|170020705|ref|YP_001725659.1| seryl-tRNA synthetase [Escherichia coli ATCC 8739]
 gi|170080551|ref|YP_001729871.1| seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with
           serine [Escherichia coli str. K-12 substr. DH10B]
 gi|170683015|ref|YP_001744277.1| seryl-tRNA synthetase [Escherichia coli SMS-3-5]
 gi|188492608|ref|ZP_02999878.1| seryl-tRNA synthetase [Escherichia coli 53638]
 gi|191167614|ref|ZP_03029425.1| seryl-tRNA synthetase [Escherichia coli B7A]
 gi|191172133|ref|ZP_03033677.1| seryl-tRNA synthetase [Escherichia coli F11]
 gi|193064674|ref|ZP_03045753.1| seryl-tRNA synthetase [Escherichia coli E22]
 gi|194428395|ref|ZP_03060936.1| seryl-tRNA synthetase [Escherichia coli B171]
 gi|194438706|ref|ZP_03070793.1| seryl-tRNA synthetase [Escherichia coli 101-1]
 gi|195939556|ref|ZP_03084938.1| seryl-tRNA synthetase [Escherichia coli O157:H7 str. EC4024]
 gi|208808989|ref|ZP_03251326.1| seryl-tRNA synthetase [Escherichia coli O157:H7 str. EC4206]
 gi|208815536|ref|ZP_03256715.1| seryl-tRNA synthetase [Escherichia coli O157:H7 str. EC4045]
 gi|208822033|ref|ZP_03262352.1| seryl-tRNA synthetase [Escherichia coli O157:H7 str. EC4042]
 gi|209396596|ref|YP_002269566.1| seryl-tRNA synthetase [Escherichia coli O157:H7 str. EC4115]
 gi|209918142|ref|YP_002292226.1| seryl-tRNA synthetase [Escherichia coli SE11]
 gi|215486023|ref|YP_002328454.1| seryl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69]
 gi|217326397|ref|ZP_03442481.1| seryl-tRNA synthetase [Escherichia coli O157:H7 str. TW14588]
 gi|218553479|ref|YP_002386392.1| seryl-tRNA synthetase [Escherichia coli IAI1]
 gi|218557801|ref|YP_002390714.1| seryl-tRNA synthetase [Escherichia coli S88]
 gi|218688681|ref|YP_002396893.1| seryl-tRNA synthetase [Escherichia coli ED1a]
 gi|218694366|ref|YP_002402033.1| seryl-tRNA synthetase [Escherichia coli 55989]
 gi|218700589|ref|YP_002408218.1| seryl-tRNA synthetase [Escherichia coli IAI39]
 gi|218704322|ref|YP_002411841.1| seryl-tRNA synthetase [Escherichia coli UMN026]
 gi|227884140|ref|ZP_04001945.1| seryl-tRNA synthetase [Escherichia coli 83972]
 gi|237707117|ref|ZP_04537598.1| seryl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
 gi|238900151|ref|YP_002925947.1| seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with
           serine [Escherichia coli BW2952]
 gi|253774078|ref|YP_003036909.1| seryl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|254161007|ref|YP_003044115.1| seryl-tRNA synthetase [Escherichia coli B str. REL606]
 gi|254792093|ref|YP_003076930.1| seryl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
 gi|256020979|ref|ZP_05434844.1| seryl-tRNA synthetase [Shigella sp. D9]
 gi|256023406|ref|ZP_05437271.1| seryl-tRNA synthetase [Escherichia sp. 4_1_40B]
 gi|260843143|ref|YP_003220921.1| seryl-tRNA synthetase [Escherichia coli O103:H2 str. 12009]
 gi|260854184|ref|YP_003228075.1| seryl-tRNA synthetase [Escherichia coli O26:H11 str. 11368]
 gi|260867065|ref|YP_003233467.1| seryl-tRNA synthetase [Escherichia coli O111:H- str. 11128]
 gi|261227398|ref|ZP_05941679.1| seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with
           serine [Escherichia coli O157:H7 str. FRIK2000]
 gi|261256179|ref|ZP_05948712.1| seryl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK966]
 gi|291281896|ref|YP_003498714.1| Seryl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
 gi|293404200|ref|ZP_06648194.1| seryl-tRNA synthetase [Escherichia coli FVEC1412]
 gi|293409271|ref|ZP_06652847.1| seryl-tRNA synthetase [Escherichia coli B354]
 gi|293414175|ref|ZP_06656824.1| seryl-tRNA synthetase [Escherichia coli B185]
 gi|293433190|ref|ZP_06661618.1| seryl-tRNA synthetase [Escherichia coli B088]
 gi|297518813|ref|ZP_06937199.1| seryl-tRNA synthetase [Escherichia coli OP50]
 gi|298379981|ref|ZP_06989586.1| seryl-tRNA synthetase [Escherichia coli FVEC1302]
 gi|300817005|ref|ZP_07097224.1| seryl-tRNA synthetase [Escherichia coli MS 107-1]
 gi|300823632|ref|ZP_07103759.1| seryl-tRNA synthetase [Escherichia coli MS 119-7]
 gi|300896500|ref|ZP_07115024.1| seryl-tRNA synthetase [Escherichia coli MS 198-1]
 gi|300902950|ref|ZP_07120894.1| seryl-tRNA synthetase [Escherichia coli MS 84-1]
 gi|300921073|ref|ZP_07137457.1| seryl-tRNA synthetase [Escherichia coli MS 115-1]
 gi|300926531|ref|ZP_07142320.1| seryl-tRNA synthetase [Escherichia coli MS 182-1]
 gi|300929586|ref|ZP_07145049.1| seryl-tRNA synthetase [Escherichia coli MS 187-1]
 gi|300937613|ref|ZP_07152422.1| seryl-tRNA synthetase [Escherichia coli MS 21-1]
 gi|300949747|ref|ZP_07163724.1| seryl-tRNA synthetase [Escherichia coli MS 116-1]
 gi|300954716|ref|ZP_07167151.1| seryl-tRNA synthetase [Escherichia coli MS 175-1]
 gi|300978543|ref|ZP_07174296.1| seryl-tRNA synthetase [Escherichia coli MS 45-1]
 gi|300983196|ref|ZP_07176475.1| seryl-tRNA synthetase [Escherichia coli MS 200-1]
 gi|301022878|ref|ZP_07186711.1| seryl-tRNA synthetase [Escherichia coli MS 69-1]
 gi|301024412|ref|ZP_07188097.1| seryl-tRNA synthetase [Escherichia coli MS 196-1]
 gi|301047849|ref|ZP_07194899.1| seryl-tRNA synthetase [Escherichia coli MS 185-1]
 gi|301302500|ref|ZP_07208631.1| seryl-tRNA synthetase [Escherichia coli MS 124-1]
 gi|301325784|ref|ZP_07219232.1| seryl-tRNA synthetase [Escherichia coli MS 78-1]
 gi|301646338|ref|ZP_07246226.1| seryl-tRNA synthetase [Escherichia coli MS 146-1]
 gi|306812651|ref|ZP_07446844.1| seryl-tRNA synthetase [Escherichia coli NC101]
 gi|307137521|ref|ZP_07496877.1| seryl-tRNA synthetase [Escherichia coli H736]
 gi|307311720|ref|ZP_07591360.1| seryl-tRNA synthetase [Escherichia coli W]
 gi|309795298|ref|ZP_07689716.1| seryl-tRNA synthetase [Escherichia coli MS 145-7]
 gi|312969039|ref|ZP_07783246.1| seryl-tRNA synthetase [Escherichia coli 2362-75]
 gi|312971020|ref|ZP_07785199.1| seryl-tRNA synthetase [Escherichia coli 1827-70]
 gi|331641414|ref|ZP_08342549.1| serine--tRNA ligase [Escherichia coli H736]
 gi|331646160|ref|ZP_08347263.1| serine--tRNA ligase [Escherichia coli M605]
 gi|331651912|ref|ZP_08352931.1| serine--tRNA ligase [Escherichia coli M718]
 gi|331656965|ref|ZP_08357927.1| serine--tRNA ligase [Escherichia coli TA206]
 gi|331662308|ref|ZP_08363231.1| serine--tRNA ligase [Escherichia coli TA143]
 gi|331667267|ref|ZP_08368132.1| serine--tRNA ligase [Escherichia coli TA271]
 gi|331672434|ref|ZP_08373224.1| serine--tRNA ligase [Escherichia coli TA280]
 gi|331676680|ref|ZP_08377376.1| serine--tRNA ligase [Escherichia coli H591]
 gi|331682402|ref|ZP_08383021.1| serine--tRNA ligase [Escherichia coli H299]
 gi|332282204|ref|ZP_08394617.1| seryl-tRNA synthetase [Shigella sp. D9]
 gi|67473027|sp|P0A8L1|SYS_ECOLI RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|67473028|sp|P0A8L2|SYS_ECOL6 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|67473029|sp|P0A8L3|SYS_ECO57 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|67473030|sp|P0A8L4|SYS_SHIFL RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|122424423|sp|Q1RE21|SYS_ECOUT RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|122957696|sp|Q0T8M9|SYS_SHIF8 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|123049332|sp|Q0TJF7|SYS_ECOL5 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|123617600|sp|Q3Z3M7|SYS_SHISS RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|123755624|sp|Q323L0|SYS_SHIBS RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|166221437|sp|A1A9D6|SYS_ECOK1 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|166987311|sp|A7ZJW2|SYS_ECO24 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|166987312|sp|A7ZYJ7|SYS_ECOHS RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|189083568|sp|B1IWN0|SYS_ECOLC RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|226701391|sp|B7MHK5|SYS_ECO45 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|226701392|sp|B7NM82|SYS_ECO7I RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|226701393|sp|B7M821|SYS_ECO8A RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|226701394|sp|B7NAP4|SYS_ECOLU RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|226701395|sp|B1LJX0|SYS_ECOSM RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|229559900|sp|B1X833|SYS_ECODH RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|238065099|sp|B5YT28|SYS_ECO5E RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|238065100|sp|B6I8W4|SYS_ECOSE RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|254783025|sp|B7UMY4|SYS_ECO27 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|254783026|sp|B7LD85|SYS_ECO55 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|254783027|sp|B7MRV6|SYS_ECO81 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|259511667|sp|C4ZQ19|SYS_ECOBW RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|26107319|gb|AAN79502.1|AE016758_106 Seryl-tRNA synthetase [Escherichia coli CFT073]
 gi|42950|emb|CAA28673.1| unnamed protein product [Escherichia coli]
 gi|1651420|dbj|BAA35625.1| seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with
           serine [Escherichia coli str. K12 substr. W3110]
 gi|1787120|gb|AAC73979.1| seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with
           serine [Escherichia coli str. K-12 substr. MG1655]
 gi|13360437|dbj|BAB34401.1| serine tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
 gi|24051120|gb|AAN42485.1| serine tRNA synthetase [Shigella flexneri 2a str. 301]
 gi|30040626|gb|AAP16357.1| serine tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|73854928|gb|AAZ87635.1| serine tRNA synthetase [Shigella sonnei Ss046]
 gi|81244790|gb|ABB65498.1| serine tRNA synthetase [Shigella boydii Sb227]
 gi|91071512|gb|ABE06393.1| seryl-tRNA synthetase [Escherichia coli UTI89]
 gi|110342685|gb|ABG68922.1| seryl-tRNA synthetase [Escherichia coli 536]
 gi|110614442|gb|ABF03109.1| serine tRNA synthetase [Shigella flexneri 5 str. 8401]
 gi|115512201|gb|ABJ00276.1| seryl-tRNA synthetase [Escherichia coli APEC O1]
 gi|157066096|gb|ABV05351.1| seryl-tRNA synthetase [Escherichia coli HS]
 gi|157079586|gb|ABV19294.1| seryl-tRNA synthetase [Escherichia coli E24377A]
 gi|169755633|gb|ACA78332.1| seryl-tRNA synthetase [Escherichia coli ATCC 8739]
 gi|169888386|gb|ACB02093.1| seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with
           serine [Escherichia coli str. K-12 substr. DH10B]
 gi|170520733|gb|ACB18911.1| seryl-tRNA synthetase [Escherichia coli SMS-3-5]
 gi|187768390|gb|EDU32234.1| seryl-tRNA synthetase [Escherichia coli O157:H7 str. EC4196]
 gi|188013954|gb|EDU52076.1| seryl-tRNA synthetase [Escherichia coli O157:H7 str. EC4113]
 gi|188487807|gb|EDU62910.1| seryl-tRNA synthetase [Escherichia coli 53638]
 gi|188998912|gb|EDU67898.1| seryl-tRNA synthetase [Escherichia coli O157:H7 str. EC4076]
 gi|189355936|gb|EDU74355.1| seryl-tRNA synthetase [Escherichia coli O157:H7 str. EC4401]
 gi|189361156|gb|EDU79575.1| seryl-tRNA synthetase [Escherichia coli O157:H7 str. EC4486]
 gi|189366796|gb|EDU85212.1| seryl-tRNA synthetase [Escherichia coli O157:H7 str. EC4501]
 gi|189372720|gb|EDU91136.1| seryl-tRNA synthetase [Escherichia coli O157:H7 str. EC869]
 gi|189376450|gb|EDU94866.1| seryl-tRNA synthetase [Escherichia coli O157:H7 str. EC508]
 gi|190902375|gb|EDV62113.1| seryl-tRNA synthetase [Escherichia coli B7A]
 gi|190907660|gb|EDV67255.1| seryl-tRNA synthetase [Escherichia coli F11]
 gi|192927731|gb|EDV82346.1| seryl-tRNA synthetase [Escherichia coli E22]
 gi|194413610|gb|EDX29891.1| seryl-tRNA synthetase [Escherichia coli B171]
 gi|194422338|gb|EDX38338.1| seryl-tRNA synthetase [Escherichia coli 101-1]
 gi|208728790|gb|EDZ78391.1| seryl-tRNA synthetase [Escherichia coli O157:H7 str. EC4206]
 gi|208732184|gb|EDZ80872.1| seryl-tRNA synthetase [Escherichia coli O157:H7 str. EC4045]
 gi|208737518|gb|EDZ85201.1| seryl-tRNA synthetase [Escherichia coli O157:H7 str. EC4042]
 gi|209157996|gb|ACI35429.1| seryl-tRNA synthetase [Escherichia coli O157:H7 str. EC4115]
 gi|209775018|gb|ACI85821.1| serine tRNA synthetase [Escherichia coli]
 gi|209775020|gb|ACI85822.1| serine tRNA synthetase [Escherichia coli]
 gi|209775022|gb|ACI85823.1| serine tRNA synthetase [Escherichia coli]
 gi|209775024|gb|ACI85824.1| serine tRNA synthetase [Escherichia coli]
 gi|209775026|gb|ACI85825.1| serine tRNA synthetase [Escherichia coli]
 gi|209911401|dbj|BAG76475.1| seryl-tRNA synthase [Escherichia coli SE11]
 gi|215264095|emb|CAS08437.1| seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with
           serine [Escherichia coli O127:H6 str. E2348/69]
 gi|217322618|gb|EEC31042.1| seryl-tRNA synthetase [Escherichia coli O157:H7 str. TW14588]
 gi|218351098|emb|CAU96802.1| seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with
           serine [Escherichia coli 55989]
 gi|218360247|emb|CAQ97797.1| seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with
           serine [Escherichia coli IAI1]
 gi|218364570|emb|CAR02256.1| seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with
           serine [Escherichia coli S88]
 gi|218370575|emb|CAR18382.1| seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with
           serine [Escherichia coli IAI39]
 gi|218426245|emb|CAR07070.1| seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with
           serine [Escherichia coli ED1a]
 gi|218431419|emb|CAR12297.1| seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with
           serine [Escherichia coli UMN026]
 gi|222032627|emb|CAP75366.1| Seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with
           serine [Escherichia coli LF82]
 gi|226898327|gb|EEH84586.1| seryl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
 gi|227838892|gb|EEJ49358.1| seryl-tRNA synthetase [Escherichia coli 83972]
 gi|238863546|gb|ACR65544.1| seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with
           serine [Escherichia coli BW2952]
 gi|242376708|emb|CAQ31421.1| seryl-tRNA synthetase [Escherichia coli BL21(DE3)]
 gi|253325122|gb|ACT29724.1| seryl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253972908|gb|ACT38579.1| seryl-tRNA synthetase [Escherichia coli B str. REL606]
 gi|253977122|gb|ACT42792.1| seryl-tRNA synthetase [Escherichia coli BL21(DE3)]
 gi|254591493|gb|ACT70854.1| seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with
           serine [Escherichia coli O157:H7 str. TW14359]
 gi|257752833|dbj|BAI24335.1| seryl-tRNA synthetase [Escherichia coli O26:H11 str. 11368]
 gi|257758290|dbj|BAI29787.1| seryl-tRNA synthetase [Escherichia coli O103:H2 str. 12009]
 gi|257763421|dbj|BAI34916.1| seryl-tRNA synthetase [Escherichia coli O111:H- str. 11128]
 gi|260449961|gb|ACX40383.1| seryl-tRNA synthetase [Escherichia coli DH1]
 gi|281178027|dbj|BAI54357.1| seryl-tRNA synthetase [Escherichia coli SE15]
 gi|281600221|gb|ADA73205.1| Seryl-tRNA synthetase [Shigella flexneri 2002017]
 gi|284920746|emb|CBG33809.1| seryl-tRNA synthetase [Escherichia coli 042]
 gi|290761769|gb|ADD55730.1| Seryl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
 gi|291324009|gb|EFE63431.1| seryl-tRNA synthetase [Escherichia coli B088]
 gi|291428786|gb|EFF01811.1| seryl-tRNA synthetase [Escherichia coli FVEC1412]
 gi|291434233|gb|EFF07206.1| seryl-tRNA synthetase [Escherichia coli B185]
 gi|291469739|gb|EFF12223.1| seryl-tRNA synthetase [Escherichia coli B354]
 gi|294493263|gb|ADE92019.1| seryl-tRNA synthetase [Escherichia coli IHE3034]
 gi|298279679|gb|EFI21187.1| seryl-tRNA synthetase [Escherichia coli FVEC1302]
 gi|299880384|gb|EFI88595.1| seryl-tRNA synthetase [Escherichia coli MS 196-1]
 gi|300300277|gb|EFJ56662.1| seryl-tRNA synthetase [Escherichia coli MS 185-1]
 gi|300306960|gb|EFJ61480.1| seryl-tRNA synthetase [Escherichia coli MS 200-1]
 gi|300318327|gb|EFJ68111.1| seryl-tRNA synthetase [Escherichia coli MS 175-1]
 gi|300359649|gb|EFJ75519.1| seryl-tRNA synthetase [Escherichia coli MS 198-1]
 gi|300397340|gb|EFJ80878.1| seryl-tRNA synthetase [Escherichia coli MS 69-1]
 gi|300405011|gb|EFJ88549.1| seryl-tRNA synthetase [Escherichia coli MS 84-1]
 gi|300409622|gb|EFJ93160.1| seryl-tRNA synthetase [Escherichia coli MS 45-1]
 gi|300411924|gb|EFJ95234.1| seryl-tRNA synthetase [Escherichia coli MS 115-1]
 gi|300417448|gb|EFK00759.1| seryl-tRNA synthetase [Escherichia coli MS 182-1]
 gi|300450861|gb|EFK14481.1| seryl-tRNA synthetase [Escherichia coli MS 116-1]
 gi|300457343|gb|EFK20836.1| seryl-tRNA synthetase [Escherichia coli MS 21-1]
 gi|300462474|gb|EFK25967.1| seryl-tRNA synthetase [Escherichia coli MS 187-1]
 gi|300523832|gb|EFK44901.1| seryl-tRNA synthetase [Escherichia coli MS 119-7]
 gi|300530357|gb|EFK51419.1| seryl-tRNA synthetase [Escherichia coli MS 107-1]
 gi|300842339|gb|EFK70099.1| seryl-tRNA synthetase [Escherichia coli MS 124-1]
 gi|300847427|gb|EFK75187.1| seryl-tRNA synthetase [Escherichia coli MS 78-1]
 gi|301075441|gb|EFK90247.1| seryl-tRNA synthetase [Escherichia coli MS 146-1]
 gi|305853414|gb|EFM53853.1| seryl-tRNA synthetase [Escherichia coli NC101]
 gi|306908275|gb|EFN38774.1| seryl-tRNA synthetase [Escherichia coli W]
 gi|307552735|gb|ADN45510.1| serine tRNA synthetase [Escherichia coli ABU 83972]
 gi|307627677|gb|ADN71981.1| seryl-tRNA synthetase [Escherichia coli UM146]
 gi|308120948|gb|EFO58210.1| seryl-tRNA synthetase [Escherichia coli MS 145-7]
 gi|309701169|emb|CBJ00469.1| seryl-tRNA synthetase [Escherichia coli ETEC H10407]
 gi|310336781|gb|EFQ01948.1| seryl-tRNA synthetase [Escherichia coli 1827-70]
 gi|312286441|gb|EFR14354.1| seryl-tRNA synthetase [Escherichia coli 2362-75]
 gi|312945416|gb|ADR26243.1| seryl-tRNA synthetase [Escherichia coli O83:H1 str. NRG 857C]
 gi|313650195|gb|EFS14607.1| seryl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|315060178|gb|ADT74505.1| seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with
           serine [Escherichia coli W]
 gi|315135541|dbj|BAJ42700.1| seryl-tRNA synthetase [Escherichia coli DH1]
 gi|315257933|gb|EFU37901.1| seryl-tRNA synthetase [Escherichia coli MS 85-1]
 gi|315287520|gb|EFU46931.1| seryl-tRNA synthetase [Escherichia coli MS 110-3]
 gi|315291252|gb|EFU50612.1| seryl-tRNA synthetase [Escherichia coli MS 153-1]
 gi|315296139|gb|EFU55448.1| seryl-tRNA synthetase [Escherichia coli MS 16-3]
 gi|315619205|gb|EFU99784.1| seryl-tRNA synthetase [Escherichia coli 3431]
 gi|320180610|gb|EFW55539.1| Seryl-tRNA synthetase [Shigella boydii ATCC 9905]
 gi|320183168|gb|EFW58026.1| Seryl-tRNA synthetase [Shigella flexneri CDC 796-83]
 gi|320192620|gb|EFW67261.1| Seryl-tRNA synthetase [Escherichia coli O157:H7 str. EC1212]
 gi|320196611|gb|EFW71234.1| Seryl-tRNA synthetase [Escherichia coli WV_060327]
 gi|320202288|gb|EFW76859.1| Seryl-tRNA synthetase [Escherichia coli EC4100B]
 gi|320637763|gb|EFX07555.1| seryl-tRNA synthetase [Escherichia coli O157:H7 str. G5101]
 gi|320642887|gb|EFX12088.1| seryl-tRNA synthetase [Escherichia coli O157:H- str. 493-89]
 gi|320648344|gb|EFX16999.1| seryl-tRNA synthetase [Escherichia coli O157:H- str. H 2687]
 gi|320654182|gb|EFX22250.1| seryl-tRNA synthetase [Escherichia coli O55:H7 str. 3256-97 TW
           07815]
 gi|320659806|gb|EFX27362.1| seryl-tRNA synthetase [Escherichia coli O55:H7 str. USDA 5905]
 gi|320664275|gb|EFX31426.1| seryl-tRNA synthetase [Escherichia coli O157:H7 str. LSU-61]
 gi|323157221|gb|EFZ43344.1| seryl-tRNA synthetase [Escherichia coli EPECa14]
 gi|323159518|gb|EFZ45498.1| seryl-tRNA synthetase [Escherichia coli E128010]
 gi|323165354|gb|EFZ51141.1| seryl-tRNA synthetase [Shigella sonnei 53G]
 gi|323172135|gb|EFZ57773.1| seryl-tRNA synthetase [Escherichia coli LT-68]
 gi|323175485|gb|EFZ61080.1| seryl-tRNA synthetase [Escherichia coli 1180]
 gi|323185142|gb|EFZ70507.1| seryl-tRNA synthetase [Escherichia coli 1357]
 gi|323190715|gb|EFZ75984.1| seryl-tRNA synthetase [Escherichia coli RN587/1]
 gi|323379265|gb|ADX51533.1| seryl-tRNA synthetase [Escherichia coli KO11]
 gi|323937999|gb|EGB34261.1| seryl-tRNA synthetase [Escherichia coli E1520]
 gi|323942809|gb|EGB38974.1| seryl-tRNA synthetase [Escherichia coli E482]
 gi|323947318|gb|EGB43326.1| seryl-tRNA synthetase [Escherichia coli H120]
 gi|323953397|gb|EGB49263.1| seryl-tRNA synthetase [Escherichia coli H252]
 gi|323958200|gb|EGB53909.1| seryl-tRNA synthetase [Escherichia coli H263]
 gi|323962941|gb|EGB58514.1| seryl-tRNA synthetase [Escherichia coli H489]
 gi|323967140|gb|EGB62564.1| seryl-tRNA synthetase [Escherichia coli M863]
 gi|323969605|gb|EGB64892.1| seryl-tRNA synthetase [Escherichia coli TA007]
 gi|323976720|gb|EGB71808.1| seryl-tRNA synthetase [Escherichia coli TW10509]
 gi|324009812|gb|EGB79031.1| seryl-tRNA synthetase [Escherichia coli MS 57-2]
 gi|324012983|gb|EGB82202.1| seryl-tRNA synthetase [Escherichia coli MS 60-1]
 gi|324116106|gb|EGC10030.1| seryl-tRNA synthetase [Escherichia coli E1167]
 gi|326338211|gb|EGD62040.1| Seryl-tRNA synthetase [Escherichia coli O157:H7 str. 1125]
 gi|326346188|gb|EGD69926.1| Seryl-tRNA synthetase [Escherichia coli O157:H7 str. 1044]
 gi|327253681|gb|EGE65310.1| seryl-tRNA synthetase [Escherichia coli STEC_7v]
 gi|330910675|gb|EGH39185.1| seryl-tRNA synthetase [Escherichia coli AA86]
 gi|331038212|gb|EGI10432.1| serine--tRNA ligase [Escherichia coli H736]
 gi|331044912|gb|EGI17039.1| serine--tRNA ligase [Escherichia coli M605]
 gi|331050190|gb|EGI22248.1| serine--tRNA ligase [Escherichia coli M718]
 gi|331055213|gb|EGI27222.1| serine--tRNA ligase [Escherichia coli TA206]
 gi|331060730|gb|EGI32694.1| serine--tRNA ligase [Escherichia coli TA143]
 gi|331065623|gb|EGI37516.1| serine--tRNA ligase [Escherichia coli TA271]
 gi|331070340|gb|EGI41705.1| serine--tRNA ligase [Escherichia coli TA280]
 gi|331075369|gb|EGI46667.1| serine--tRNA ligase [Escherichia coli H591]
 gi|331080033|gb|EGI51212.1| serine--tRNA ligase [Escherichia coli H299]
 gi|332097143|gb|EGJ02126.1| seryl-tRNA synthetase [Shigella boydii 3594-74]
 gi|332104556|gb|EGJ07902.1| seryl-tRNA synthetase [Shigella sp. D9]
 gi|332342282|gb|AEE55616.1| seryl-tRNA synthetase SerS [Escherichia coli UMNK88]
 gi|332760582|gb|EGJ90871.1| seryl-tRNA synthetase [Shigella flexneri 2747-71]
 gi|332762948|gb|EGJ93198.1| seryl-tRNA synthetase [Shigella flexneri K-671]
 gi|332768071|gb|EGJ98257.1| seryl-tRNA synthetase [Shigella flexneri 2930-71]
 gi|333006696|gb|EGK26195.1| seryl-tRNA synthetase [Shigella flexneri VA-6]
 gi|333021000|gb|EGK40258.1| seryl-tRNA synthetase [Shigella flexneri K-304]
          Length = 430

 Score = 64.4 bits (155), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 64/188 (34%), Gaps = 10/188 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M     +   Y E   P +++Q     +G    +  ++F  +  ++   D
Sbjct: 170 ARMHRALSQFMLDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLFHTRPLEEEA-D 228

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
              +AL P        +    +    +LP+++      +R+E         GL+R+  F 
Sbjct: 229 TSNYALIPTAEVPLTNLVRGEIIDEDDLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFD 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E       ++      + +  G     + L T              +W  
Sbjct: 289 KVEMVQIVRPEDSMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMGFGACKTYDLEVWIP 348

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 349 AQNTYREI 356


>gi|120603778|ref|YP_968178.1| seryl-tRNA synthetase [Desulfovibrio vulgaris DP4]
 gi|166221435|sp|A1VH35|SYS_DESVV RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|120564007|gb|ABM29751.1| seryl-tRNA synthetase [Desulfovibrio vulgaris DP4]
          Length = 424

 Score = 64.4 bits (155), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 44/342 (12%), Positives = 104/342 (30%), Gaps = 42/342 (12%)

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L ++E    E     +   K   + E A  L E        E ++++  +       Q +
Sbjct: 41  LTEVESLKSERNKASAEVAKAKRAGEDASALIERLG--GVSERIKALDLEAEAVKSEQND 98

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
           W  +   P++      +   +   V    W             GT         ++    
Sbjct: 99  W--MLTIPNIPHESVPEGRDENDNVEVLRW-------------GTPRAFSFTPREHWDIG 143

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK--DDYEEINT 296
                 D  +  +                W     ++ + L +Y        + Y E+  
Sbjct: 144 VALGGLDFERAGKLAGSRFTVYWK-----W---AARLERALANYFLDTHISANGYTEVLP 195

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P ++++     +G    +  ++F ++  D        + L P        +    +    
Sbjct: 196 PFMVNRKTMTGTGQLPKFEEDLFRLESWD--------YFLIPTAEVPLTNLHADEILEEG 247

Query: 357 ELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           +LP+        +R+E         GL+R   FT+ +   F   E+ F E  ++     +
Sbjct: 248 DLPLGYTAQTPCFRSEAGSYGKDTRGLIRQHQFTKVEMVRFAHPERSFEELERMRGHAEA 307

Query: 414 IYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
           + ++ G    ++ L +              +W   ++  + +
Sbjct: 308 LLQNLGLPYRVITLCSGDMGFSATKTYDLEVWLPGQDKYREI 349


>gi|332091134|gb|EGI96224.1| seryl-tRNA synthetase [Shigella dysenteriae 155-74]
          Length = 430

 Score = 64.4 bits (155), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 64/188 (34%), Gaps = 10/188 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M     +   Y E   P +++Q     +G    +  ++F  +  ++   D
Sbjct: 170 ARMHRALSQFMLDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLFHTRPLEEEA-D 228

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
              +AL P        +    +    +LP+++      +R+E         GL+R+  F 
Sbjct: 229 TSNYALIPTAEVPLTNLVRGEIIDEDDLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFD 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E       ++      + +  G     + L T              +W  
Sbjct: 289 KVEMVQIVRPEDSMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMGFGACKTYDLEVWIP 348

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 349 AQNTYREI 356


>gi|320175334|gb|EFW50440.1| Seryl-tRNA synthetase [Shigella dysenteriae CDC 74-1112]
          Length = 430

 Score = 64.4 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 64/188 (34%), Gaps = 10/188 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M     +   Y E   P +++Q     +G    +  ++F  +  ++   D
Sbjct: 170 ARMHRALSQFMLDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLFHTRPLEEEA-D 228

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
              +AL P        +    +    +LP+++      +R+E         GL+R+  F 
Sbjct: 229 TSNYALIPTAEVPLTNLVRGEIIDEDDLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFD 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E       ++      + +  G     + L T              +W  
Sbjct: 289 KVEMVQIVRPEDSMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMGFGACKTYDLEVWIP 348

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 349 AQNTYREI 356


>gi|27364961|ref|NP_760489.1| alanyl-tRNA synthetase [Vibrio vulnificus CMCP6]
 gi|29611879|sp|Q8DC49|SYA_VIBVU RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|27361107|gb|AAO10016.1| alanyl-tRNA synthetase [Vibrio vulnificus CMCP6]
          Length = 860

 Score = 64.4 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 59/143 (41%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFS 115
             +  I   + R+   + HS  H++  A++ +  E     G +++ +   +DF   +  +
Sbjct: 545 DQVTAIVDAERRAAISLNHSATHLLHAALRQVLGEHVAQKGSLVKAENLRFDFSHLEAVT 604

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           + EL ++E+ +   I R+       +  E A++         K          + V +  
Sbjct: 605 AAELKEVERLVNAQIRRNHAIETNIMDIESAKQKGAMALFGEKY--------DDEVRVLS 656

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G++  +LC G H  +TG +  F
Sbjct: 657 MGDFSTELCGGIHASNTGDIGLF 679


>gi|326803471|ref|YP_004321289.1| histidine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
 gi|326651350|gb|AEA01533.1| histidine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
          Length = 432

 Score = 64.4 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 74/444 (16%), Positives = 145/444 (32%), Gaps = 86/444 (19%)

Query: 270 RKGWK--------IFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            KG          I+Q +    R  + K  + EI TP       +           ++  
Sbjct: 5   PKGTVDILPGQVEIWQAIEKTARDIMAKYRFNEIRTPMF---ESYDLFARGVGETTDVVT 61

Query: 321 VKCADDTIKDLRTFALKPM-NCPGHVAVFNHGLKSYREL-PVRLAEFGSVYRNEPSGSLH 378
            +  D   K  R  ALKP    P   A   + L     + P ++     ++R E      
Sbjct: 62  KEMYDFYDKGDRHIALKPEGTAPIVRAFIENKLYGPEHIKPYKVYYISPMFRYERP---- 117

Query: 379 GLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD 438
              R R F Q    VF    +     ++   L   I +  G + + +         +G +
Sbjct: 118 QGGRQRQFHQLGVEVF--DGKTALSDVETIALAWEILESLGVKDLKL-----VINSLGDN 170

Query: 439 ALWDDAENIMKGVLDTIKNSSQDRINTG-----------------VLLGEGAFYGPKF-E 480
                A    +  L       ++ ++                       E     P   +
Sbjct: 171 E----ARLNYREALINYLKPFEEELSEDSKTRLYQNPLRVLDSKDPKDKEIVKDAPNILD 226

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYV---NSHSEKCHPVMIHRAVFGS------- 530
           Y+ + +  R  Q  ++    N+P + ++  V   + + +    +M +  VFG+       
Sbjct: 227 YLSEASKERFEQVQSLLASLNIPYQIDSNMVRGLDYYQDTIFEIMTNSEVFGAETTICGG 286

Query: 531 -------------------------IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAV 565
                                    +ER I +++E  K +L +  +P+   + TI  S V
Sbjct: 287 GSYSGLVKELSEGREDVPGFGFAIGMERLI-LLLEAQKSDLAVE-NPLDIYMVTIGQSVV 344

Query: 566 EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
             A +I   L+   L++E D        + R+         +  G+ E +E++I ++   
Sbjct: 345 SQALQIVQALRRQGLNVEFDLNQRKPKKQFRDADRHGAAYTLTLGESELAEKNINVKNMT 404

Query: 626 STTTQKVSLLDAIPIL--TKESLP 647
           S   +  ++ D I      KE++ 
Sbjct: 405 SGQERHFAIDDVIEHFDQVKEAMK 428


>gi|33240753|ref|NP_875695.1| seryl-tRNA synthetase [Prochlorococcus marinus subsp. marinus str.
           CCMP1375]
 gi|46577201|sp|Q7VAZ8|SYS_PROMA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|33238281|gb|AAQ00348.1| Seryl-tRNA synthetase [Prochlorococcus marinus subsp. marinus str.
           CCMP1375]
          Length = 425

 Score = 64.4 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 81/234 (34%), Gaps = 20/234 (8%)

Query: 220 IYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDL----FHIAEDGSGVIFWHRKGWKI 275
             G   N   ++  +   L+    ++H ++A E+ L      +    S  +     G ++
Sbjct: 117 PDGKDENDNLQIRNWGNPLKGEGYKEHWEIAEELGLLDTEKSVRIAKSRFVTLFNHGARL 176

Query: 276 FQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
            ++LI++M        Y E+  P +++    + SG    +    F     D         
Sbjct: 177 ERSLINFMLDIHTSKGYSEVLPPVLVNTASLEGSGQLPKFAEESFKCSEDD--------L 228

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDA 391
            L P       ++  + +  + +LP++   +   +R E         GL+R+  F + + 
Sbjct: 229 WLTPTAEVPLTSLHRNEVIPFEKLPIKYVAYSPCFRREAGSYGRDTRGLIRLHQFNKVEL 288

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALW 441
           + F   ++       I     +I +       +V+L +              +W
Sbjct: 289 YWFVEPKKSKEAHQIITADAEAILQKLELPYRVVELCSGDLGFSASCTYDLEVW 342


>gi|239994811|ref|ZP_04715335.1| prolyl-tRNA synthetase [Alteromonas macleodii ATCC 27126]
          Length = 131

 Score = 64.4 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 40/120 (33%), Gaps = 11/120 (9%)

Query: 533 RFIGIMIENFKGNLPL-WLSPIQAIVTTITSSAV-------EYAQEIANLLKSHHLSIET 584
           R +   IE       + W  PI      +    +       E A+ +   L +  + +  
Sbjct: 12  RIVAAAIEQNHDKFGIKWPDPIAPFKIALIPMNMHKSHRIKEAAEALYEELVALGVEVLF 71

Query: 585 DFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL---DAIPIL 641
           D R E       +  +  IP  I+ G++    + +  +   +   Q + +    D +  L
Sbjct: 72  DDRKERPGVMFNDMELIGIPHSIVIGERNLDNQQVEYKNRRTGEKQLLDISAAKDFVAAL 131


>gi|218548415|ref|YP_002382206.1| seryl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
 gi|226701416|sp|B7LN61|SYS_ESCF3 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|218355956|emb|CAQ88572.1| seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with
           serine [Escherichia fergusonii ATCC 35469]
 gi|324113810|gb|EGC07785.1| seryl-tRNA synthetase [Escherichia fergusonii B253]
 gi|325496838|gb|EGC94697.1| seryl-tRNA synthetase [Escherichia fergusonii ECD227]
          Length = 430

 Score = 64.4 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 64/188 (34%), Gaps = 10/188 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M     +   Y E   P +++Q     +G    +  ++F  +  ++   D
Sbjct: 170 ARMHRALAQFMLDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLFHTRPLEEEA-D 228

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
              +AL P        +    +    +LP+++      +R+E         GL+R+  F 
Sbjct: 229 TSNYALIPTAEVPLTNLVRGEIIDEDDLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFD 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E       ++      + +  G     + L T              +W  
Sbjct: 289 KVEMVQIVRPEDSMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMGFGACKTYDLEVWIP 348

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 349 AQNTYREI 356


>gi|320100437|ref|YP_004176029.1| glycyl-tRNA synthetase [Desulfurococcus mucosus DSM 2162]
 gi|319752789|gb|ADV64547.1| glycyl-tRNA synthetase [Desulfurococcus mucosus DSM 2162]
          Length = 582

 Score = 64.4 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 43/273 (15%), Positives = 91/273 (33%), Gaps = 37/273 (13%)

Query: 390 DAHVFCTKEQMFNEC-LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIM 448
           + H              +++       +  G+        +R  +   +D  +   +   
Sbjct: 305 EKHPHERAHYSLQTFDQEVYTEKYGWIEVAGYAYRTTYDLSRHMQYSKADLTF--FKRYE 362

Query: 449 KGVLDTIKNSSQDRINTGVLLGEG--------AFYGPKFEYILKDAIGR---DWQCGTIQ 497
           K V  T+  +  D    GVL GEG        A   P  E + ++  G+   + +   I 
Sbjct: 363 KPVERTVSKAYPDPARIGVLYGEGRARIMEKLASRTP--EDLYRELSGKGYVEVEGVRIP 420

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG--------NLPLW 549
            D  +  +        H EK  P ++       +ER + +++E+            LP  
Sbjct: 421 PDAFIVKQ---EVERVHGEKIIPHVV--EPSFGVERLLYVVLEHAYTVRDGKVVLRLPRH 475

Query: 550 LSPIQAIVTTI-------TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
           L+P    V  +        +  VE A++I   L         D  + +I  +        
Sbjct: 476 LAPYHVAVFPLVAGRRPEHARIVEVARDIYRRLVKKGFRAIYDD-DGSIGRRYARADEVG 534

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
           +P  +    +   + ++ +R   +   ++VS+ 
Sbjct: 535 VPFAVTVDYQTLEDGTVTVRDRDTALQERVSVD 567



 Score = 40.9 bits (94), Expect = 0.71,   Method: Composition-based stats.
 Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 2/58 (3%)

Query: 331 LRTFALKPMNCPGHVAVFNHGLKS-YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
                L+P N  G    F + L+    +LP+ +A+ G V RNE S    GL+R+R FT
Sbjct: 161 GEVGYLRPENAQGMFINFANVLRMMRNKLPLGIAQVGRVARNEISPR-QGLLRLREFT 217


>gi|145634774|ref|ZP_01790482.1| alanyl-tRNA synthetase [Haemophilus influenzae PittAA]
 gi|145267940|gb|EDK07936.1| alanyl-tRNA synthetase [Haemophilus influenzae PittAA]
          Length = 874

 Score = 64.4 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 29/148 (19%), Positives = 60/148 (40%), Gaps = 10/148 (6%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSS 116
           S+  I     R    + HS  H++  A++ I     V  G ++ D    +DF + +  + 
Sbjct: 546 SVNAIVDAKRRHNTSLNHSATHLLHAALRQILGLHVVQKGSLVSDKALRFDFAQPEAITK 605

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
           ++L++IE  + + I  + P     +  + A+          K          + V +   
Sbjct: 606 EQLSEIETLVNQKIRANFPVQTDIMDIDSAKAKGAMALFGEKY--------GDKVRVLTM 657

Query: 177 GEW-FDLCRGPHVRSTGQVKKFFKLMKV 203
           G++  +LC G H + TG +  F  + + 
Sbjct: 658 GDFSIELCGGIHAKHTGDIGLFKIITEN 685


>gi|145595910|ref|YP_001160207.1| seryl-tRNA synthetase [Salinispora tropica CNB-440]
 gi|145305247|gb|ABP55829.1| seryl-tRNA synthetase [Salinispora tropica CNB-440]
          Length = 427

 Score = 64.4 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 37/256 (14%), Positives = 87/256 (33%), Gaps = 16/256 (6%)

Query: 208 WRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDL----FHIAEDGS 263
              +        +        + +  +       + RDH +L+R + L      +   GS
Sbjct: 101 RMSELPNLPADDVVPGGKEANRVVKTFGEPPAIDKVRDHVELSRLLGLVDHERGVKLGGS 160

Query: 264 GVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK 322
           G   +   G ++   L++++  + +   YE +  P +L +     +G +  +  +++ + 
Sbjct: 161 GFWMYTGLGARLEWALVNWLIDQNVAAGYEFLLPPHLLLETAGFAAGQFPKFYDDVYHL- 219

Query: 323 CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHG 379
                    R   L P      +  + + +    +LP+++  +   YR E +GS     G
Sbjct: 220 ---SRQSAPRGQFLLPTAETAILGAYQNEILDTAKLPLKVFAYTPCYRREAAGSHSDERG 276

Query: 380 LMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV----KLSTRPEKRV 435
            +R   F + +   F   EQ       +      + +  G            S+   ++ 
Sbjct: 277 TVRGHQFNKVEVFQFALPEQADAALEAMVTHAEGLVERLGLHYQRSLLAAGDSSAAMRKT 336

Query: 436 GSDALWDDAENIMKGV 451
               +W  +    K V
Sbjct: 337 LDIEVWMPSTGKYKEV 352


>gi|319779380|ref|YP_004130293.1| Alanyl-tRNA synthetase [Taylorella equigenitalis MCE9]
 gi|317109404|gb|ADU92150.1| Alanyl-tRNA synthetase [Taylorella equigenitalis MCE9]
          Length = 874

 Score = 64.4 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 32/161 (19%), Positives = 67/161 (41%), Gaps = 10/161 (6%)

Query: 45  GKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG- 103
           G+V   S  + + S++ I   + R L    HS  H+M  A++ +  +     G +++   
Sbjct: 535 GRVEKGSIKLND-SVDAIVNAENRVLVTAHHSVTHLMHLALREVLGDHVKQKGSLVDSEK 593

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE 163
             +DF    P + +E+ ++E  +   I        + + ++ A +         K     
Sbjct: 594 TRFDFSHNSPMTEEEIRKVELLVNNQILMGRDTYVEVMPYDDALKSGAIGLFGEKY---- 649

Query: 164 SIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVA 204
                + V + + G+  +LC G HV +TGQ+  F  + +  
Sbjct: 650 ----GDFVRVMQIGDSRELCGGTHVSNTGQIGLFKIISESG 686


>gi|218680942|ref|ZP_03528839.1| alanyl-tRNA synthetase [Rhizobium etli CIAT 894]
          Length = 556

 Score = 64.4 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 30/142 (21%), Positives = 58/142 (40%), Gaps = 4/142 (2%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFS 115
            ++ +      RS     HS  H++ EA++ +        G  +  +   +D    +P S
Sbjct: 353 DAVVLTVDHARRSRLRANHSATHLLHEAMREVLGTHVAQKGSLVAPERLRFDVSHPKPMS 412

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKAREL--FESKKEAYKVEILESIPAKENVTL 173
           ++EL  +E+   EI+ +++P   + +S + A          E Y  E+            
Sbjct: 413 AEELKVVEEMANEIVLQNAPVTTRLMSVDDAIAEGAMALFGEKYGDEVRVVSMGTGLHGA 472

Query: 174 YRQGEW-FDLCRGPHVRSTGQV 194
                +  +LC G HV +TGQ+
Sbjct: 473 KSNKPYSVELCGGTHVSATGQI 494


>gi|89902012|ref|YP_524483.1| seryl-tRNA synthetase [Rhodoferax ferrireducens T118]
 gi|122478532|sp|Q21TF1|SYS_RHOFD RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|89346749|gb|ABD70952.1| seryl-tRNA synthetase [Rhodoferax ferrireducens T118]
          Length = 452

 Score = 64.4 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 87/246 (35%), Gaps = 15/246 (6%)

Query: 221 YGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDL-FHIAEDGSGVIFWHRKG--WKIFQ 277
           +G                 + E +DH  +   + L F +    +G  F   KG   ++ +
Sbjct: 125 HGNVVVRSWSPDGKGPKAFDFEVKDHVDIGTPLGLDFELGVKLTGARFTVMKGLIARLHR 184

Query: 278 TLISYM--RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK---DLR 332
            L  +M   +  +  Y E  TP +++    + +G    + A++FA K      +   D  
Sbjct: 185 ALAQFMLDVQTQEHGYTECYTPYIVNAQSMRGTGQLPKFEADLFAAKKGGQEAEAAPDNS 244

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQD 389
              L P +           + +  ELPV+L      +R+E   +     GL+R   F + 
Sbjct: 245 ALYLIPTSEVPLTNFVRDVVLAEAELPVKLTAHTPCFRSEAGSAGRDTRGLIRQHQFDKV 304

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAE 445
           +       ++ +    ++     +I +  G    ++ L T              +W  A+
Sbjct: 305 EMVQIVHPDKSYETLEQMTGHAEAILQKLGLPYRVMSLCTGDMGFGASKTYDLEVWLPAQ 364

Query: 446 NIMKGV 451
           N  + +
Sbjct: 365 NTYREI 370


>gi|260361824|ref|ZP_05774840.1| alanine--tRNA ligase [Vibrio parahaemolyticus K5030]
 gi|308114481|gb|EFO52021.1| alanine--tRNA ligase [Vibrio parahaemolyticus K5030]
          Length = 788

 Score = 64.4 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 27/150 (18%), Positives = 60/150 (40%), Gaps = 10/150 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFS 115
             +  I   + R+   + HS  H++  A++ +  E     G +++ +   +DF   +  +
Sbjct: 545 DEVATIVDAERRAAISLNHSATHLLHAALRQVLGEHVTQKGSLVKAENLRFDFSHLEAVT 604

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           + EL ++E+ +   I R+       +  E A++         K          + V +  
Sbjct: 605 AAELKEVERLVNAQIRRNHVIETNVMDIESAKKKGAMALFGEKY--------DDEVRVLS 656

Query: 176 QGEW-FDLCRGPHVRSTGQVKKFFKLMKVA 204
            G++  +LC G H  +TG +  F    +  
Sbjct: 657 MGDFSTELCGGIHASNTGDIGLFKITSESG 686


>gi|153809521|ref|ZP_01962189.1| hypothetical protein BACCAC_03839 [Bacteroides caccae ATCC 43185]
 gi|149127829|gb|EDM19052.1| hypothetical protein BACCAC_03839 [Bacteroides caccae ATCC 43185]
          Length = 454

 Score = 64.4 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 27/204 (13%), Positives = 71/204 (34%), Gaps = 19/204 (9%)

Query: 442 DDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFN 501
           +++E I+   L+T+   ++  ++  +  G   + G  FE    D        G      N
Sbjct: 268 EESEFIL-NTLETMGLKNEIELDLTLARGLNYYTGAIFEVKALDVQIGSITGGGR--YDN 324

Query: 502 LPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM--IENFKGNLPLWLSPIQAIVTT 559
           L   F    V+              +    +R   ++  +E +       ++  + +   
Sbjct: 325 LTGVFGMSGVSGVG-----------ISFGADRIFDVLNQLELYPKEA---VNGTEVLFIN 370

Query: 560 ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSI 619
                  ++  +   +++  +  E       +  ++   + K IP + I G+ E +E  +
Sbjct: 371 FGEKEAAFSMGVLAKVRAAGIRAEIFPDASKMKKQMSYANAKNIPFVAIVGENEMNEGKV 430

Query: 620 GIRRFGSTTTQKVSLLDAIPILTK 643
            ++   +     VS  + I  + +
Sbjct: 431 MLKNMETGEQNLVSAEELIAAVKR 454


>gi|14521875|ref|NP_127351.1| histidyl-tRNA synthetase [Pyrococcus abyssi GE5]
 gi|13878794|sp|Q9UY31|SYH_PYRAB RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|5459095|emb|CAB50581.1| hisS histidyl-tRNA synthetase [Pyrococcus abyssi GE5]
          Length = 431

 Score = 64.4 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 36/196 (18%), Positives = 70/196 (35%), Gaps = 15/196 (7%)

Query: 448 MKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFN 507
           +  +L   +     +I+ G+  G   +    FE I+ + +G     G  + D NL   F 
Sbjct: 247 LVDILSWYEVDEWIQIDLGIARGFDYYTSIVFEAIVPNDLGIGSIGGGGRYD-NLIEVFG 305

Query: 508 AFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEY 567
                       P        G IER I I+   +KG LP   +     V  +  S  + 
Sbjct: 306 ----------GKPTPATGFAIG-IERLIPIL--EWKGLLPELKAGPDVFVIPVGDS-RDV 351

Query: 568 AQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGST 627
           A  I   L+   +  + +     +   +   +   + + II G ++     + IR   S 
Sbjct: 352 ATAIVTRLRKAGIRSDIELSGRKLRKALDYANRIGVRLSIIVGKRDLERGVVTIRDLESG 411

Query: 628 TTQKVSLLDAIPILTK 643
              +V + + +  + +
Sbjct: 412 NQVEVPVDNVVTKVRE 427


>gi|150389940|ref|YP_001319989.1| histidyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
 gi|149949802|gb|ABR48330.1| histidyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
          Length = 436

 Score = 64.4 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 73/192 (38%), Gaps = 17/192 (8%)

Query: 446 NIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSR 505
             +   LD +   S+ + N  +  G   + G  +E  LKD        G+I        R
Sbjct: 248 EELNDYLDAMGIGSKVKYNPFLARGLEIYTGTVYEIFLKD--------GSITSSMGAGGR 299

Query: 506 FNAFYVNS-HSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA 564
           ++        +E  +P +    +   ++     +       L   L      +  + + A
Sbjct: 300 YDDIIGKFIQNEVGYPAV---GISFGLDVIYTALSMKRDNELESNLD---VYIIPLGTEA 353

Query: 565 VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRF 624
              A ++A  L+   + ++ D     +  ++   + +KIP ++I G+ E   + I ++  
Sbjct: 354 E--ALKMACELRGQGIKVDIDMTERKLKKRLDYANKEKIPYVLILGEDEVKSQRIKMKDM 411

Query: 625 GSTTTQKVSLLD 636
            S T +++ + +
Sbjct: 412 KSGTEEEMKISE 423



 Score = 37.5 bits (85), Expect = 8.5,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 55/167 (32%), Gaps = 19/167 (11%)

Query: 268 WHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYR--ANMFAVKCA 324
           +      I   +I  ++   +   Y+ + TP +    +   S +          +++K  
Sbjct: 14  FFPNEQIIRNGIIKKLQEVFELYGYQPLETPTLYYLEVLA-SKYAGGAEILKETYSLKDQ 72

Query: 325 DDTIKDLR-TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRV 383
            +    LR    +      G              +P +  E G V+R+ P      L R+
Sbjct: 73  GERELGLRYDLTIPFSKVIGMNPNLR--------MPFKRYEIGKVFRDGP----VKLGRM 120

Query: 384 RGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR 430
           R F Q D  V   K  M     ++  +   ++   G +  +   + +
Sbjct: 121 REFIQCDVDVVGVKSMMAEA--ELMFMATEVFDKLGLDIYLSYNNRK 165


>gi|186685474|ref|YP_001868670.1| histidyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
 gi|229558699|sp|B2J5J5|SYH_NOSP7 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|186467926|gb|ACC83727.1| histidyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
          Length = 470

 Score = 64.4 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 65/461 (14%), Positives = 141/461 (30%), Gaps = 82/461 (17%)

Query: 261 DGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDS---YRA 316
             SG   +     ++   L+  +RR  +   +  I TP V    + Q  G+      Y  
Sbjct: 11  TPSGFPEFLPSEKRLELYLLDIIRRVFESYGFTPIETPAVERLEVLQAKGNQGDNIIYGI 70

Query: 317 NMFAVKCA-------DDTIKD---LRTFALKPMNCPGHVAVFNHGLKSYREL--PVRLAE 364
           +               +T KD         + +     V +  +  +   EL  P    +
Sbjct: 71  DPILPPNRQAEKDKSGETGKDKSGETGSEARALKFDQTVPLAAYIARHLNELIFPFARYQ 130

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
              V+R E +       R R F Q D  V   +E       ++  +I  I++       +
Sbjct: 131 TDMVFRGERAKD----GRFRQFRQCDIDVVARRELSLLYDAQMPAIITEIFEAINIGDFL 186

Query: 425 VKLSTRP--EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL-LGEGAFYGPKF-E 480
           ++++ R        S  + +D       ++D ++   + ++   +   G       K  +
Sbjct: 187 IRINNRKVLTGFFKSVGITEDKIKSCINIVDNLEKIGESKVKQELEKEGVSGEQTQKIID 246

Query: 481 YILKDAIGRDWQCGTIQVDFNLPS--------------------------RFNAFYVNSH 514
           +I  D    +       +  NLP                           RF      + 
Sbjct: 247 FIKIDGSVDEVLDKLKHLTLNLPETEQLSLGISELETVIAGVRNLGVTENRFCIDLSIAR 306

Query: 515 SEK------------CHPVMIHRAVFGSIERFIGI-MIENFKGNLP-------------- 547
                           H  +      G  E  +G+ + E   G                 
Sbjct: 307 GLDYYTGTVYETTLLGHEALGSICSGGRYEELVGVFLGEKMPGVGISIGLTRLISRLLKA 366

Query: 548 -----LWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
                L  +P Q +V  +    +    +++  L+   +++ T+F    +  + +    + 
Sbjct: 367 GILSTLAATPAQVMVVNMQEDLMPTYLKVSQHLRQAGINVITNFDKRPLGKQFQLADKQG 426

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           I   +I G +EA+ +   ++   S    +V L++    + +
Sbjct: 427 IQFCVIIGSEEAAAQKSSLKDLKSGEQVEVLLVNLAEEVKR 467


>gi|317050489|ref|YP_004111605.1| seryl-tRNA synthetase [Desulfurispirillum indicum S5]
 gi|316945573|gb|ADU65049.1| seryl-tRNA synthetase [Desulfurispirillum indicum S5]
          Length = 430

 Score = 64.4 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 36/244 (14%), Positives = 80/244 (32%), Gaps = 22/244 (9%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIF 276
           G       E+ ++    +   E R H +L   + +   A       S    +   G ++ 
Sbjct: 114 GAGEEENVEIRRWGTPRQFDFEPRPHDELGTALGMLDFARGVKIAQSRFTLYKGMGARLE 173

Query: 277 QTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           + LI++M      +  Y E+  P ++++     +G    +  ++FA         +    
Sbjct: 174 RALINFMLDIHTGEHGYTEVQPPLLVNRESMTATGQLPKFEEDLFAT--------EGGNL 225

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDA 391
            L P        +    +     LP+    +   +R E         GL+R   F + + 
Sbjct: 226 LLIPTAEVPVTNIHRDEILPMDALPLNYTAYTPCFRREAGSYGKDTKGLIRQHQFNKVEL 285

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENI 447
             FC  +  + E   + +    I +       +V L +              +W  ++N 
Sbjct: 286 VKFCHPDTSYEELETLLHHAEVILQRLELPYRVVCLCSGDLGFSAAKTYDIEVWVPSQNT 345

Query: 448 MKGV 451
            + +
Sbjct: 346 FREI 349


>gi|315651872|ref|ZP_07904875.1| alanine--tRNA ligase [Eubacterium saburreum DSM 3986]
 gi|315485874|gb|EFU76253.1| alanine--tRNA ligase [Eubacterium saburreum DSM 3986]
          Length = 885

 Score = 64.4 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 28/150 (18%), Positives = 60/150 (40%), Gaps = 10/150 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFS 115
            ++E +   + R      HS  H++ +A++ +        G  ++     +DF   +  S
Sbjct: 554 DTVETVVDAENRRRTAANHSATHLLHKALREVLGNHVEQAGSYVDARRLRFDFTHFKSLS 613

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            +EL  +E  +   I +  P +   +  E A++         K +        ++V +  
Sbjct: 614 KEELDDVEALVNREINKSLPVVTDVMDVESAKKSGAMALFGEKYQ--------KDVRVVS 665

Query: 176 QGEW-FDLCRGPHVRSTGQVKKFFKLMKVA 204
            G++  +LC G HV +T  +K F  +    
Sbjct: 666 MGDFSKELCGGTHVHNTADIKLFKIISDNG 695


>gi|237809468|ref|YP_002893908.1| alanyl-tRNA synthetase [Tolumonas auensis DSM 9187]
 gi|237501729|gb|ACQ94322.1| alanyl-tRNA synthetase [Tolumonas auensis DSM 9187]
          Length = 874

 Score = 64.4 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 60/150 (40%), Gaps = 10/150 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFS 115
            ++E I     R+   + HS  H++  A+++   E     G  +  D   +DF   +  +
Sbjct: 545 DTVEAIVDNTRRNATALHHSATHLLHAALRNALGEHVAQKGSQVGPDRLRFDFSHFEAIN 604

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
              L QIE+ +   I ++     Q +S + A+          K          + V + +
Sbjct: 605 PAALRQIEQSVNAEIRKNVLIDTQLMSLDDAKTSGAMALFGEKY--------GDEVRVVK 656

Query: 176 QGEW-FDLCRGPHVRSTGQVKKFFKLMKVA 204
            G++  +LC G H + TG +  F  + +  
Sbjct: 657 MGDFSTELCGGTHAKHTGDIGFFKIISENG 686


>gi|73661318|ref|YP_300099.1| seryl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|123643864|sp|Q4A172|SYS_STAS1 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|72493833|dbj|BAE17154.1| seryl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 427

 Score = 64.4 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 51/346 (14%), Positives = 110/346 (31%), Gaps = 48/346 (13%)

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
            ++E+     K+   IA+     +     + A     +  +  KV               
Sbjct: 44  QAEEMKAERNKVSGEIAQK---KRNKEDADDAIAAMRNLGDEIKV--------------- 85

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
                 D      V    ++ +   ++         D +   + R +GT    + E   +
Sbjct: 86  ----LDDTLNQVDVDLNDKLSRIPNIIHDDVPEGATDEDNIEVKR-WGTPRTFEFEDKAH 140

Query: 235 LYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI--KDDYE 292
              +EE E  D  + A+      +        F    G ++ + L++YM  K   +  Y 
Sbjct: 141 WDLVEELEMVDFERAAKVSGARFV--------FLTGDGAQLERALMNYMITKHTTQHGYT 192

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  PQ+++      +G    +  ++F V        +       P         + + +
Sbjct: 193 EMMVPQLVNADSMYGTGQLPKFEEDLFKV--------EKEGLYTIPTAEVPLTNYYRNEI 244

Query: 353 KSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
            +   LP +     + YR+E   +     GL+R+  F + +       E  +     + +
Sbjct: 245 IAPDVLPAKFTAQSACYRSEAGSAGRDTRGLIRLHQFDKVEMVRIEKPEDSWQALEDMTH 304

Query: 410 LIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
              +I ++ G     V L T              +W  + N  K +
Sbjct: 305 HAEAILEELGLPYRRVILCTGDIGFGSSKTYDLEVWLPSYNDYKEI 350


>gi|302877502|ref|YP_003846066.1| seryl-tRNA synthetase [Gallionella capsiferriformans ES-2]
 gi|302580291|gb|ADL54302.1| seryl-tRNA synthetase [Gallionella capsiferriformans ES-2]
          Length = 431

 Score = 64.4 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 67/188 (35%), Gaps = 10/188 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M     D   Y E+  P +++    + +G    +  ++FAV         
Sbjct: 170 ARLHRALAQFMLDTHTDTHGYTEVYVPYLVNADSMRGTGQLPKFEEDLFAV-PRQMGEGG 228

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFT 387
           ++ F L P        +    +    +LP++       +R+E   +     GL+R   F 
Sbjct: 229 MQNFYLIPTAEVPVTNMVRDEIIPLEQLPLKYVAHTPCFRSEAGSAGRDTRGLIRQHQFE 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       +  +    ++     +I +  G    +V+L T              +W  
Sbjct: 289 KVELVQIVHPDDSYAALEQLLGHAEAILQKLGLHYRVVRLCTGDIGFSSATTYDIEVWLP 348

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 349 AQNTYREI 356


>gi|226941475|ref|YP_002796549.1| Sys [Laribacter hongkongensis HLHK9]
 gi|254783032|sp|C1DBY7|SYS_LARHH RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|226716402|gb|ACO75540.1| Sys [Laribacter hongkongensis HLHK9]
          Length = 426

 Score = 64.4 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 62/188 (32%), Gaps = 15/188 (7%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M     D   Y E+ TP +++      +G    +  ++F V       + 
Sbjct: 169 ARLHRALAQFMLNTHADEHGYTEVYTPYMVNATSMYGTGQLPKFEEDLFRV------PRG 222

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
              F L P             +    +LP+R       +R+E         G++R   F 
Sbjct: 223 DENFYLVPTAEVPVTNFVRDEIVKAADLPLRYVAHTPCFRSEAGAYGRDTRGMIRQHQFD 282

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E+  N    +     +I K  G    ++ L T              +W  
Sbjct: 283 KVELVQVVRPEESLNALETLTGHAETILKKLGLPYRVIVLCTGDMGFGSQKTYDIEVWLP 342

Query: 444 AENIMKGV 451
           A++  + +
Sbjct: 343 AQDTYREI 350


>gi|218883366|ref|YP_002427748.1| glycyl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n]
 gi|218764982|gb|ACL10381.1| Glycyl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n]
          Length = 583

 Score = 64.4 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 57/153 (37%), Gaps = 19/153 (12%)

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIMIENFKG--------NLPLWLSPIQAIVTTI----- 560
           H EK  P ++       +ER + I++E             LP+ L+P    V  +     
Sbjct: 431 HGEKIIPHVV--EPSFGVERLLYIVLEYSYTVRDGKTVLKLPVHLAPYHVAVFPLVTGKK 488

Query: 561 --TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERS 618
              +  +E A+ I   L +    +  D  + +I  +        IP  +    +   + +
Sbjct: 489 QEHARIIEIARNIYRRLITRGFRVIYDD-DGSIGRRYARVDEIGIPYAVTVDYQTLEDGT 547

Query: 619 IGIRRFGSTTTQKVSLLDAIP-ILTKESLPPDC 650
           + +R   S+  ++V + +    +L K    PD 
Sbjct: 548 VTVRDRDSSLQERVKIDELEKYLLMKYGFQPDL 580



 Score = 46.3 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 2/75 (2%)

Query: 331 LRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
                L+P N  G    F + L+ +   LP+ +A+ G V RNE S    GL+R+R FT  
Sbjct: 159 GEIGYLRPENAQGMFINFANILRVARNRLPLGIAQVGKVARNEISPR-QGLLRLREFTIM 217

Query: 390 DAHVFCTKEQMFNEC 404
           +   F   E++    
Sbjct: 218 ELEFFFDPEEVEEAS 232


>gi|149182704|ref|ZP_01861171.1| seryl-tRNA synthetase [Bacillus sp. SG-1]
 gi|148849614|gb|EDL63797.1| seryl-tRNA synthetase [Bacillus sp. SG-1]
          Length = 426

 Score = 64.4 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 73/200 (36%), Gaps = 17/200 (8%)

Query: 261 DGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANM 318
            GS  +F+   G ++ + LI++M     D   YEE+  P ++++     +G    +  + 
Sbjct: 159 TGSRFVFYKGLGARLERALINFMMDLHMDEHGYEEMLPPYMVNRESMTGTGQLPKFEEDA 218

Query: 319 FAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS-- 376
           F +        +   + L P             + +  +LP+    F + +R+E   +  
Sbjct: 219 FLI--------ESEDYFLVPTAEVPVTNYHRDEILTNDQLPIAYTAFSACFRSEAGSAGR 270

Query: 377 -LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
              GL+R   F + +   F   E+ ++E  K+      + +       ++ + T      
Sbjct: 271 DTRGLIRQHQFNKVELVRFVRPEESYDELEKLTGHAEKVLQLLNLPYRVMSMCTADLGFT 330

Query: 436 ----GSDALWDDAENIMKGV 451
                   +W  +    + +
Sbjct: 331 AAKKYDIEVWIPSYGTYREI 350


>gi|225679653|gb|EEH17937.1| prolyl-tRNA synthetase [Paracoccidioides brasiliensis Pb03]
          Length = 551

 Score = 64.4 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 52/126 (41%), Gaps = 10/126 (7%)

Query: 520 PVMIHRAVFGSIERFIGI----MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLL 575
           P+ +     G   R I      + +    N P  +SP   I+ +      E A+++ + L
Sbjct: 417 PLEMGCHGIGVS-RMIAAVADTLADPKGLNWPRVISPFDVIIISDRELEKE-AEQVYDTL 474

Query: 576 ---KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR-RFGSTTTQK 631
              +   +    D R +++ +K+R+  +   P+II+ G     +  + I+ R      + 
Sbjct: 475 MESRKADVDAIIDDREKSLAWKLRDADLIGYPVIIVIGKLWKRDSKLEIQCRRLENFRET 534

Query: 632 VSLLDA 637
           VSL D 
Sbjct: 535 VSLQDL 540



 Score = 39.4 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 26/65 (40%), Gaps = 4/65 (6%)

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           +   G  YR+EP     GL+R R F   D + F   +    + ++ +N +   Y     E
Sbjct: 79  MRTLGRKYRDEPRPR-QGLLRGREFMMKDLYTF---DYSAEKAIETYNAVKEAYIRLFNE 134

Query: 422 KIMVK 426
             +  
Sbjct: 135 LKLPY 139


>gi|167581706|ref|ZP_02374580.1| histidyl-tRNA synthetase [Burkholderia thailandensis TXDOH]
          Length = 446

 Score = 64.4 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 61/403 (15%), Positives = 121/403 (30%), Gaps = 69/403 (17%)

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
             Y+ I TP V    L+ +     +           D    +     L+P N    V   
Sbjct: 42  YGYQNIRTPIVEHTQLFTRGIGEVTDIVEKEMYSFVD--ALNGENLTLRPEN-TAAVVRA 98

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD--DAHVFCTKEQMFNECLK 406
                   + P RL   G ++R+E         R R F Q   +A  F   +       +
Sbjct: 99  AIEHNMLYDGPKRLWYIGPMFRHERPQR----GRYRQFHQVGVEALGFAGPDADA----E 150

Query: 407 IHNLIISIYKDFG--------------FEKIMVKLSTRPEKRVGSDALWDDAENIM---- 448
           I  +   ++ D G               E+   ++         +D L DDA+  +    
Sbjct: 151 IIMMCQRLWDDLGLTGIKLEINSLGLAEERAAHRVELIKYLEQHADKLDDDAQRRLYTNP 210

Query: 449 -------KGVLDTIKNSSQDRINTGVLLGEGAFYGP-------KFEYILKDAIGRDWQCG 494
                     L  I  ++   I+    +    F G           + +   + R     
Sbjct: 211 LRVLDTKNPALQEIVRNAPKLIDFLGDVSRAHFEGLQRLLKANNVPFTINPRLVRGLDYY 270

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIH-------RAVFGS-IERFIGIMIENFKGNL 546
            + V   +  +  A    +   +  P++            +   IER + ++ E      
Sbjct: 271 NLTVFEWVTDKLGAQGTVAAGGRYDPLIEQLGGKPTAACGWAMGIERILELLKEEH---- 326

Query: 547 PLWLSPIQ----AIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY----KIREH 598
              L P Q      V     +A E A  +A  L+   L +      +        +++  
Sbjct: 327 ---LVPEQEGVDVYVVHQGDAAREQAFIVAERLRDTGLDVILHCSADGAGASFKSQMKRA 383

Query: 599 SIKKIPIIIICGDKEASERSIGIR-RFGSTTTQKVSLLDAIPI 640
                   +I G+ E +  +  ++   G+    + S+  ++P+
Sbjct: 384 DASGAAFAVIFGEDEVANGTASVKPLRGTGDDGEKSVQQSVPV 426


>gi|15800756|ref|NP_286770.1| seryl-tRNA synthetase [Escherichia coli O157:H7 EDL933]
 gi|12514055|gb|AAG55380.1|AE005278_6 serine tRNA synthetase; also charges selenocystein tRNA with serine
           [Escherichia coli O157:H7 str. EDL933]
          Length = 430

 Score = 64.4 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 64/188 (34%), Gaps = 10/188 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M     +   Y E   P +++Q     +G    +  ++F  +  ++   D
Sbjct: 170 ARMHRALSQFMLDLHTEQHGYSENYVPYLVNQDALYGTGQLPKFAGDLFHTRPLEEEA-D 228

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
              +AL P        +    +    +LP+++      +R+E         GL+R+  F 
Sbjct: 229 TSNYALIPTAEVPLTNLVRGEIIDEDDLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFD 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E       ++      + +  G     + L T              +W  
Sbjct: 289 KVEMVQIVRPEDSMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMGFGACKTYDLEVWIP 348

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 349 AQNTYREI 356


>gi|93006674|ref|YP_581111.1| seryl-tRNA synthetase [Psychrobacter cryohalolentis K5]
 gi|122415030|sp|Q1Q9M6|SYS_PSYCK RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|92394352|gb|ABE75627.1| seryl-tRNA synthetase [Psychrobacter cryohalolentis K5]
          Length = 428

 Score = 64.4 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 46/244 (18%), Positives = 85/244 (34%), Gaps = 16/244 (6%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDL--FHIAEDGSGVIFWHRKG--WKIF 276
           GT+ +   E+ ++    E   E +DH  +   + +  F  A   +G  F   KG   ++ 
Sbjct: 114 GTSEDDNVEVRKWGTPREFDFEIKDHTHIGETLGMLDFEAATKLTGSRFNVLKGQLAQMH 173

Query: 277 QTLISYM--RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           + LI +M     IK  Y E   P +++    + +G    +  ++   K  + T  D   F
Sbjct: 174 RALIQFMLNTHTIKYGYTETYVPYIVNSESLKGTGQLPKFEDDL--FKLTNHTNNDDMDF 231

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDA 391
            L P        +        +ELP++       +R+E         GL+R   F + + 
Sbjct: 232 YLIPTAEVPMTNLVRGERLDIKELPLKFTAHTPCFRSEAGSHGRDTRGLIRQHQFEKVEM 291

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENI 447
               T EQ       +      I +        VKL T              +W  ++  
Sbjct: 292 VNIATAEQSDELLEAMTGQAEFILQQLNLPYRTVKLCTGDMGFAAQKTYDIEVWLPSQET 351

Query: 448 MKGV 451
            + +
Sbjct: 352 YREI 355


>gi|323142308|ref|ZP_08077140.1| histidine--tRNA ligase [Phascolarctobacterium sp. YIT 12067]
 gi|322413192|gb|EFY04079.1| histidine--tRNA ligase [Phascolarctobacterium sp. YIT 12067]
          Length = 419

 Score = 64.4 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 62/434 (14%), Positives = 132/434 (30%), Gaps = 83/434 (19%)

Query: 270 RKGWK--------IFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            +G K         ++ L   MR+   +  Y+EI TP      L+Q+         ++  
Sbjct: 6   PRGTKDIMPSDVNAWRYLEETMRKICAQYGYKEIRTPVFEHTELFQRG---IGDTTDVVE 62

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
            +    T +  R+  L+P N    V  +     S  +   +    G ++R +   +    
Sbjct: 63  KEMYTFTDRGNRSITLRPENTASAVRAYVEHKLSKDDAATKFYYIGPMFRYDRPQA---- 118

Query: 381 MRVRGFTQD------------DAHVF--------------------------CTKEQMFN 402
            R+R F Q             DA +                           C  +    
Sbjct: 119 GRLREFHQFGVEALGVTGPNVDAEIILLAVQVLQSLGLKDLKLKINSVGCPKCRPQHREK 178

Query: 403 ECL----KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNS 458
                      L       F    + +     P        L + A ++ + + D  K  
Sbjct: 179 LQAFFKPNFDELCKDCQGRFDRNPLRLLDCKNPH----CHELGEGAPSLEECLCDECKEH 234

Query: 459 SQD--------RINTGVLLG--EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
            +          +   V      G  Y  K  + ++      +     Q       R++ 
Sbjct: 235 FEGLKQLLTAAGVEYEVDHNLVRGLDYYTKTAFEIQ------YAPLGAQSAVCGGGRYDG 288

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYA 568
                  ++  P +        +ER +  +    +  LP +   I A V          A
Sbjct: 289 LVQEISGDEARPGI---GFAMGMERVLLAL--EKQNLLPEFDESIDAYVVCPKQENFALA 343

Query: 569 QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
            + A  L+     +E DF   ++  ++++ +  +   ++I G+ E S  ++ +R   ++ 
Sbjct: 344 FKTAIELRRAGFKVEYDFNGRSMKSQMKQANKFQAKQVLIFGEDELSRNAVTVRNMATSE 403

Query: 629 TQKVSLLDAIPILT 642
             ++++ D I    
Sbjct: 404 QHEIAVNDIISYFN 417


>gi|256845829|ref|ZP_05551287.1| histidyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
 gi|256719388|gb|EEU32943.1| histidyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
          Length = 413

 Score = 64.4 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 64/399 (16%), Positives = 132/399 (33%), Gaps = 63/399 (15%)

Query: 288 KDDYEEINTPQVLDQHLWQ--QSGHWDSYRANMFAVKCADDTIKDLR-TFALKPMNCPGH 344
              Y  + TP   +  L++       D     M+  K   D    LR       + C   
Sbjct: 34  NYGYNFVKTPIFEETELFKRGIGEATDVVEKEMYTFKDRGDRSITLRPENTASLVRCYLE 93

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
            A++     S      R    GS++R E   +     R R F Q    VF   E+     
Sbjct: 94  NAIYAKEEIS------RFYYNGSMFRYERPQA----GRQREFNQIGLEVFG--EKSPKVD 141

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            ++  +     +  G   + VK+++   K   +       E+  K  LD + +  +DRIN
Sbjct: 142 AEVIAIGYKFLEKLGITDLEVKINSVGSKESRTIYREKLIEHFSKH-LDDMCDDCKDRIN 200

Query: 465 TGVL-------LGEGAFY--GPKF-EYILKDAIGR----------------DWQCGTIQV 498
              L         +  FY   P   +++ +D                    +       +
Sbjct: 201 RNPLRLLDCKVDKDKDFYKSAPNIIDFLFEDERKHYEDVKKYLNVFGIKYTEDPTLVRGL 260

Query: 499 DFNLPSRFNAFYVN------------SHS---EKCHPVMIHRAVFGSIERFIGIMIENFK 543
           D+   + F                    +   E     +        +ER + ++ EN+ 
Sbjct: 261 DYYSSTVFEIVTNKLGSQGTVLGGGRYDNLLKELGDKDIPAVGFATGVERIMMLLGENYP 320

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
            N P         +  +  +  E A +IA  L+ + + +  D+  + +   +++     +
Sbjct: 321 KNNPD------VYIAWLGENTSETALKIAESLRDNDIKVYIDYSEKGMKSHMKKADKLSV 374

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
              II G+ E ++  + ++ F +   ++V + + I  + 
Sbjct: 375 RYCIILGEDELNKGIVLLKDFSTREQKEVKIEEIINQIK 413


>gi|255263093|ref|ZP_05342435.1| alanyl-tRNA synthetase [Thalassiobium sp. R2A62]
 gi|255105428|gb|EET48102.1| alanyl-tRNA synthetase [Thalassiobium sp. R2A62]
          Length = 884

 Score = 64.4 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 35/146 (23%), Positives = 64/146 (43%), Gaps = 6/146 (4%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSS 116
           ++E+      RS     HS  H++ EA++    +     G     D   +DF   +  S 
Sbjct: 546 AVELNVDPTRRSQIRANHSATHLLHEALRQSLGDHVAQRGSLNAPDRLRFDFSHGKALSL 605

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKAREL--FESKKEAYKVEI-LESIPAKENVTL 173
           ++L  +E ++   I +++    + ++ + AREL       E Y  E+ + S+ A+ N   
Sbjct: 606 EQLQSVEAEVNAYIRQNTGVETRIMTPDDARELGAQALFGEKYGDEVRVVSMGAQPNSGR 665

Query: 174 YRQGEWF--DLCRGPHVRSTGQVKKF 197
              G  +  +LC G HV  TG +  F
Sbjct: 666 GSLGNTYSLELCGGTHVGRTGDIGAF 691


>gi|37680987|ref|NP_935596.1| alanyl-tRNA synthetase [Vibrio vulnificus YJ016]
 gi|41018162|sp|Q7MHR6|SYA_VIBVY RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|37199737|dbj|BAC95567.1| alanyl-tRNA synthetase [Vibrio vulnificus YJ016]
          Length = 860

 Score = 64.4 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 59/143 (41%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFS 115
             +  I   + R+   + HS  H++  A++ +  E     G +++ +   +DF   +  +
Sbjct: 545 DQVTAIVDAERRAAISLNHSATHLLHAALRQVLGEHVAQKGSLVKAENLRFDFSHLEAVT 604

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           + EL ++E+ +   I R+       +  E A++         K          + V +  
Sbjct: 605 AAELKEVERLVNAQIRRNHTIETNIMDIESAKQKGAMALFGEKY--------DDEVRVLS 656

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G++  +LC G H  +TG +  F
Sbjct: 657 MGDFSTELCGGIHASNTGDIGLF 679


>gi|296332946|ref|ZP_06875404.1| seryl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305672711|ref|YP_003864382.1| seryl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|296149910|gb|EFG90801.1| seryl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305410954|gb|ADM36072.1| seryl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 425

 Score = 64.4 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 38/244 (15%), Positives = 88/244 (36%), Gaps = 22/244 (9%)

Query: 222 GTAWNTQQELTQYLYFLEE-SEKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIF 276
           G   +   E+ ++        E + H  +A E+ +          GS  +F+   G ++ 
Sbjct: 115 GETEDDNIEVRKWGEKPSFAYEPKPHWDIADELGILDFERAAKVTGSRFVFYKGLGARLE 174

Query: 277 QTLISYMRRKIKDDYE--EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           + L ++M     D+Y   E+  P ++++     +G    +  + F ++           +
Sbjct: 175 RALYNFMLDLHVDEYNYTEVIPPYMVNRASMTGTGQLPKFEEDAFKIR--------EEDY 226

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDA 391
            L P        +    + S   LP+  A F + +R+E   +     GL+R   F + + 
Sbjct: 227 FLIPTAEVPITNMHRDEILSGDSLPINYAAFSACFRSEAGSAGRDTRGLIRQHQFNKVEL 286

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENI 447
             F   E  + E  K+ N    + +       ++ + T              +W  +++ 
Sbjct: 287 VKFVKPEDSYGELEKLTNQAERVLQLLELPYRVMSMCTGDLGFTAAKKYDIEVWIPSQDT 346

Query: 448 MKGV 451
            + +
Sbjct: 347 YREI 350


>gi|119719569|ref|YP_920064.1| histidyl-tRNA synthetase [Thermofilum pendens Hrk 5]
 gi|119524689|gb|ABL78061.1| histidyl-tRNA synthetase [Thermofilum pendens Hrk 5]
          Length = 431

 Score = 64.4 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 57/410 (13%), Positives = 118/410 (28%), Gaps = 70/410 (17%)

Query: 268 WHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADD 326
           W  +     + +   +R   +   Y E+ TP      L +               +    
Sbjct: 16  WLPEEAYAKRIVSEKIREVFESYGYGEVITPAFEYLDLLKAK------AGEEVVEQIYAF 69

Query: 327 TIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
             K  R   L+         +    L   +  P+R      V+R E         R R F
Sbjct: 70  KDKAGRELGLRFEMTTPIARIVASRLDLAK--PLRFYYVQPVWRYEEPQR----GRWREF 123

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP--------------- 431
            Q    +F   E       ++  +     K  G +   ++++ R                
Sbjct: 124 WQAGIELFGISEPE--GDAEVVAVTFDALKAVGLKDFDIRVNDRRVVEDLVLGAGIPGDL 181

Query: 432 ----------EKRVGSDALWDDA------ENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                       + G + +  +       E+    +L+ +K+ S D I+T    G     
Sbjct: 182 LPSALRVLDKMDKFGEEYVVSELAKLGLREDAATSLLEKLKSGSLD-IDTSTQPGREGLR 240

Query: 476 GPKFEY-ILKDAIGRDWQCGTI---QVDFNLPSRFNAFYVNSHSEK-------------- 517
                   LK+  G +          + +     F     +S                  
Sbjct: 241 RLALVVDTLKNCYGINVTVDYAIVRGLGYYTGFVFEVKAGSSEGLGSIAGGGRYDDLVSV 300

Query: 518 -CHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTI--TSSAVEYAQEIANL 574
              P +    +   +ER +  +  + +G L L    +   V  +  T   +  A  +A  
Sbjct: 301 VGGPKIPASGMAIGVERLLEAL--SMQGALKLDYREVDVCVIPVKKTPEILSEAVAVARE 358

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRF 624
           L+   + +  +    +++  +   S +     II G++E  E  + +R  
Sbjct: 359 LRVAGMKVVLEVSERSLSKLLEAASKRGARFAIILGERELKEGVVTVRDL 408


>gi|323443262|gb|EGB00879.1| seryl-tRNA synthetase [Staphylococcus aureus O46]
          Length = 428

 Score = 64.4 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 51/357 (14%), Positives = 122/357 (34%), Gaps = 35/357 (9%)

Query: 106 YDFDKEQPFSSDELAQIEKKMQEIIA--RDSPFLKQYLSHEKARELFESKKEAYKVEILE 163
            +   + P   DE+ +++++ +++I+   +    +  +S E A +    +     +  + 
Sbjct: 18  IELRGDDPKVVDEILELDEQRRKLISATEEMKARRNKVSEEIALKKRNKENADDVIAEMR 77

Query: 164 SIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
           ++         +  E  D          G + +   L+         D +   + + +GT
Sbjct: 78  TLGDDIKEKDSQLNE-IDNKM------IGILCRIPNLISDDVPQGESDEDNVEVKK-WGT 129

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYM 283
                 E   +   +EE +  D  + A+      +             G ++ + L++YM
Sbjct: 130 PREFSFEPKAHWDIVEELKMADFDRAAKVSGARFVYLTNE--------GAQLERALMNYM 181

Query: 284 RRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
             K   +  Y E+  PQ+++      +G    +  ++F V        +       P   
Sbjct: 182 ITKHTTQHGYTEMMVPQLVNADTMYGTGQLPKFEEDLFKV--------EKEGLYTIPTAE 233

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKE 398
                 + + +     LP +     + +R+E   +     GL+R+  F + +   F   E
Sbjct: 234 VPLTNFYRNEIIQPGVLPEKFTGQSACFRSEAGSAGRDTRGLIRLHQFDKVEMVRFEQPE 293

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
             +N   ++     +I ++ G     V L T              +W  + N  K +
Sbjct: 294 DSWNALEEMTTNAEAILEELGLPYRRVILCTGDIGFSASKTYDLEVWLPSYNDYKEI 350


>gi|258648890|ref|ZP_05736359.1| histidine--tRNA ligase [Prevotella tannerae ATCC 51259]
 gi|260850916|gb|EEX70785.1| histidine--tRNA ligase [Prevotella tannerae ATCC 51259]
          Length = 455

 Score = 64.4 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 9/88 (10%), Positives = 40/88 (45%)

Query: 558 TTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASER 617
                +  +Y  ++A   ++  +S E    +  +  ++   + + +P + + G  E  + 
Sbjct: 368 INFGEAEADYCLQLARQTRAAGISTEVFPDSVKMKKQMSYANARNVPYVALVGADEMRDG 427

Query: 618 SIGIRRFGSTTTQKVSLLDAIPILTKES 645
           ++ ++   +   + +S+ + I ++++ +
Sbjct: 428 TVSLKDMVNGEQKTLSIEEVIRLISENA 455


>gi|227543803|ref|ZP_03973852.1| serine--tRNA ligase [Lactobacillus reuteri CF48-3A]
 gi|300908871|ref|ZP_07126334.1| serine--tRNA ligase [Lactobacillus reuteri SD2112]
 gi|227186218|gb|EEI66289.1| serine--tRNA ligase [Lactobacillus reuteri CF48-3A]
 gi|300894278|gb|EFK87636.1| serine--tRNA ligase [Lactobacillus reuteri SD2112]
          Length = 435

 Score = 64.4 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 36/231 (15%), Positives = 82/231 (35%), Gaps = 24/231 (10%)

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYM-RRKI 287
            E   +    E     D  +  +      +        ++   G ++ + + ++M    +
Sbjct: 135 FEPKHHWDIGENLGILDFDRAGKVSGARFV--------YYLGLGAQLERAVYNFMLDEHM 186

Query: 288 KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
           K+ Y E+  P +++      +G +  ++  ++ V        +     L P         
Sbjct: 187 KEGYTEVLPPYIVNADSMYGTGQFPKFKEGVYQV--------NGEDMTLIPTAEVPLTNY 238

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           +   +    ELPV +      +R+E   +     GL+R+  F + +   +   E  ++E 
Sbjct: 239 YRGEVIPTEELPVYVTALTPSFRSEAGAAGRDTRGLIRMHQFNKVEMVKYTKPENSWDEL 298

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD----ALWDDAENIMKGV 451
            K+     +I K       ++ L+T       S+     LW  A+N  + V
Sbjct: 299 EKMTANAENILKKLNLPYHVITLTTGDMSFTASETHDLELWMPAQNKYREV 349


>gi|205830246|sp|A8GA09|SYA_SERP5 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
          Length = 875

 Score = 64.4 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 64/162 (39%), Gaps = 16/162 (9%)

Query: 45  GKVCDLSDPVREGSIEIITPED------PRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP 98
           G+       +  GS+++    D       R+   + HS  H++  A++    E     G 
Sbjct: 528 GQAIGHQGKLSHGSLKVNDRVDAKIDTVRRNRIRLNHSATHLLHAALRQTLGEHVAQKGS 587

Query: 99  IIEDGF-YYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAY 157
           ++ D +  +DF   +    +++  +E  + + I R+ P   + ++ + A+          
Sbjct: 588 LVNDKYLRFDFSHFEAMKPEQIRTVEDLVNQQIRRNLPVQTEVMALDDAKGKGAMALFGE 647

Query: 158 KVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKFF 198
           K          +NV +   G++  +LC G H   TG +  F 
Sbjct: 648 KY--------DDNVRVLTMGDFSTELCGGTHASRTGDIGLFR 681


>gi|300311235|ref|YP_003775327.1| seryl-tRNA synthetase [Herbaspirillum seropedicae SmR1]
 gi|124483334|emb|CAM32540.1| Seryl-tRNA synthetase [Herbaspirillum seropedicae]
 gi|300074020|gb|ADJ63419.1| seryl-tRNA synthetase [Herbaspirillum seropedicae SmR1]
          Length = 433

 Score = 64.4 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 39/223 (17%), Positives = 80/223 (35%), Gaps = 13/223 (5%)

Query: 242 EKRDHRKLAREMDL-FHIAEDGSGVIFWHRKG--WKIFQTLISYM--RRKIKDDYEEINT 296
           E +DH  +   + L F  A   +G  F   KG   ++ + L  +M     ++  Y E  T
Sbjct: 135 EIKDHVDVGAALGLDFDTATKLTGSRFAVLKGGIARLHRALAQFMLNTHTMEHGYTECYT 194

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK-DLRTFALKPMNCPGHVAVFNHGLKSY 355
           P +++    + +G    + A++FA K      + +     L P             + + 
Sbjct: 195 PYIVNADSLRGTGQLPKFEADLFAAKKGGQEGEAENAALYLIPTAEVPLTNFVRDEIVAG 254

Query: 356 RELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
             LP++       +R+E         G++R   F + +       EQ ++   ++     
Sbjct: 255 DALPMKFTAHSPCFRSEAGSYGRDTRGMIRQHQFDKVEMVQIVHPEQSYDALDEMLGHAE 314

Query: 413 SIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
           +I K  G    ++ L T              +W  A+   + +
Sbjct: 315 TILKKLGLPYRVITLCTGDMGFGAAKTYDIEVWLPAQKTYREI 357


>gi|157369088|ref|YP_001477077.1| alanyl-tRNA synthetase [Serratia proteamaculans 568]
 gi|157320852|gb|ABV39949.1| alanyl-tRNA synthetase [Serratia proteamaculans 568]
          Length = 892

 Score = 64.4 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 64/162 (39%), Gaps = 16/162 (9%)

Query: 45  GKVCDLSDPVREGSIEIITPED------PRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP 98
           G+       +  GS+++    D       R+   + HS  H++  A++    E     G 
Sbjct: 545 GQAIGHQGKLSHGSLKVNDRVDAKIDTVRRNRIRLNHSATHLLHAALRQTLGEHVAQKGS 604

Query: 99  IIEDGF-YYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAY 157
           ++ D +  +DF   +    +++  +E  + + I R+ P   + ++ + A+          
Sbjct: 605 LVNDKYLRFDFSHFEAMKPEQIRTVEDLVNQQIRRNLPVQTEVMALDDAKGKGAMALFGE 664

Query: 158 KVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKFF 198
           K          +NV +   G++  +LC G H   TG +  F 
Sbjct: 665 KY--------DDNVRVLTMGDFSTELCGGTHASRTGDIGLFR 698


>gi|19074790|ref|NP_586296.1| GLYCYL-tRNA SYNTHETASE [Encephalitozoon cuniculi GB-M1]
 gi|74664167|sp|Q8SQZ6|SYG_ENCCU RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Diadenosine
           tetraphosphate synthetase; Short=AP-4-A synthetase;
           AltName: Full=Glycine--tRNA ligase; Short=GlyRS
 gi|19069432|emb|CAD25900.1| GLYCYL-tRNA SYNTHETASE [Encephalitozoon cuniculi GB-M1]
          Length = 579

 Score = 64.4 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 64/400 (16%), Positives = 120/400 (30%), Gaps = 95/400 (23%)

Query: 329 KDLRTFALKPMNCPGHVAVFNHGLKSYRE--LPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
           K  +T  L+P    G    F   L  Y    LP   A  G  YRNE S    GL+RVR F
Sbjct: 165 KGGQTMFLRPETAQGQFLNFK-KLCEYNNDKLPFASASIGKAYRNEISPR-SGLLRVREF 222

Query: 387 TQDDAHVFCTKEQMFNECLK---------IHNLIISIYKDFGFEKIMVKLSTRPEKRVGS 437
            Q +   F   ++  +             +H+            +  +  +      +G 
Sbjct: 223 DQAEIEHFVLTDEKDHPKFSTVQGIKLKLMHHDASEEITLKEAIERGIVCNETMGYYIGR 282

Query: 438 DALWDDAENIMKGVL-------DTIKNSSQDRINTGV----------------------- 467
            AL+     I + +L       D + + ++   +  +                       
Sbjct: 283 TALFLIELGIDRELLRFRQHKKDEMAHYAKGCWDAEIYTSYGWIECVGIADRACYDLSCH 342

Query: 468 ---------------LLGEGAFYGPKFE-------------YILKDAIG-----RDWQCG 494
                             E   +  K +              +++   G      +    
Sbjct: 343 EDGSKVDLRCKRRLAEPKEIEEWVLKLDKKEWGAKLRDRFSVLMETVNGLSQKYIEKNVV 402

Query: 495 TIQVDFN-LPSRFNAFYVNSHSEK-CHPVMIHRAVFGSIE------RFIGIMIEN----F 542
           +I  + N L  +F+ + +N    +    V +   +   IE      R +  +IE+     
Sbjct: 403 SIGENRNRLSVKFDEYTINIECSRVKKKVFVENVIPDVIEPSFGIGRILYALIEHSFYLR 462

Query: 543 KGNLP-----LWLSPIQAIV--TTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
           + + P       ++P+Q  +          E+   I   L  + L +  + R+ +I  K 
Sbjct: 463 EDSRPVFRFKPAIAPVQCAIGYLIHFDEFNEHILNIKRFLTDNGLVVHVNERSCSIGRKY 522

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
                  IP  I        +R + IR   S    +V + 
Sbjct: 523 SSCDELGIPFFITFDPDFLKDRMVTIRERDSMQQIRVDVE 562


>gi|227530052|ref|ZP_03960101.1| histidyl-tRNA synthetase [Lactobacillus vaginalis ATCC 49540]
 gi|227350020|gb|EEJ40311.1| histidyl-tRNA synthetase [Lactobacillus vaginalis ATCC 49540]
          Length = 433

 Score = 64.4 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 74/417 (17%), Positives = 140/417 (33%), Gaps = 54/417 (12%)

Query: 269 HRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
                +++Q + +  R    +  Y EI TP       +          +++   +  D  
Sbjct: 18  LPGESELWQKVENVARNTFAEFGYSEIRTPMF---EDYNVFARNVGDTSDIVEKQMYDFH 74

Query: 328 IKDLRTFALKPMNCPGHVAVF--NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRG 385
            K  R  AL+P    G V  +  N         P ++   G ++R E   S     R R 
Sbjct: 75  DKGDRHIALRPEGTAGVVRAYVQNKLFGPEYAKPYKVYYMGPMFRYERPES----GRQRQ 130

Query: 386 FTQ--DDAHVFCTKEQMFNECLKIHNLIIS--------IYKDFGFEKIMVKLSTRPEKRV 435
           FTQ   +A    + +      L+                    G ++            +
Sbjct: 131 FTQIGCEALNSESPQIDAEVILEALMFFKRLGISGLRVAINTLGDKETRDNYRQALIDYL 190

Query: 436 --GSDALWDDAENIMKG----VLDTIKNSSQDR-------INTGVLLGEGAFYGPK---- 478
               D L DD++  +      VLD+   + +         +++        F   K    
Sbjct: 191 KPHYDELSDDSKERLYKNPLRVLDSKDETDKKIVADAPSILDSLSDYSAKYFDSVKRILD 250

Query: 479 ---FEYILKDAI--GRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
               +Y++ + +  G D+   TI    +  S F   Y        +  +I + + G  E 
Sbjct: 251 KFNVDYVVDNEMVRGLDYYTHTIFEIMSNSSVFGGGYTTICGGGRYNGLISQ-IGGPDEG 309

Query: 534 FIGIMI-------ENFKGNLPLWLSP-IQAIVTTITSSAVEYAQEIANLLKSHHLSIETD 585
            IG  I          + N      P +     T+   A E+A E+   L++  + ++ D
Sbjct: 310 GIGYGIGVERLLLLLRQENKSFIPQPGLDLFFATVGEEADEFAFELMEPLRNMGIKVDKD 369

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR---RFGSTTTQKVSLLDAIP 639
           ++   +  +I+E S +      + GD E S + I +       S   QKVS+ + + 
Sbjct: 370 YQGLKVGTQIKEASRRNSKYFAVIGDNEVSSKEIELNLTEADSSEKGQKVSIDELLS 426


>gi|319740173|gb|ADV60380.1| glu- + pro-tRNA synthetase [Oberthueria formosibia]
          Length = 135

 Score = 64.4 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 45/130 (34%), Gaps = 15/130 (11%)

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
           G +Y    E  +  + GR  Q  T        S+     V +  +K   + + +  +G  
Sbjct: 1   GGYYTTTVEGYIP-SNGRGIQGATSHCLGQNFSKMFDITVENPEKKGEKIHVWQNSWGLS 59

Query: 532 ERFIGIMIENFKGNLPLWLSP----IQAIVTTIT----------SSAVEYAQEIANLLKS 577
            R IG+M+     +  L L P     Q I+  +                   ++ N L+ 
Sbjct: 60  TRVIGVMVMIHGDDKGLVLPPRIAKTQVILIAVGITAKTTPEDREKLEGKTDDLRNELRK 119

Query: 578 HHLSIETDFR 587
             L  E+D R
Sbjct: 120 AGLRAESDLR 129


>gi|253689580|ref|YP_003018770.1| alanyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|251756158|gb|ACT14234.1| alanyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 875

 Score = 64.4 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 26/151 (17%), Positives = 58/151 (38%), Gaps = 10/151 (6%)

Query: 56  EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGF-YYDFDKEQPF 114
             S++       R    + HS  H++  A++ +  +     G ++ D +  +DF   +  
Sbjct: 545 NDSVDANVDSQRRDRIRLNHSATHLLHAALRQVLGDHVAQKGSLVNDSYLRFDFSHTEAM 604

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
             +++ Q+E  +   I R+       ++ + AR          K          ++V + 
Sbjct: 605 KPEQIRQVEDIVNAQIRRNLTVQTDVMALDDARAKGAMALFGEKY--------DDHVRVL 656

Query: 175 RQGEW-FDLCRGPHVRSTGQVKKFFKLMKVA 204
             G++  +LC G H   TG +  F  + +  
Sbjct: 657 TMGDFSIELCGGTHASRTGDIGLFQIISESG 687


>gi|227114946|ref|ZP_03828602.1| alanyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 875

 Score = 64.4 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 26/151 (17%), Positives = 58/151 (38%), Gaps = 10/151 (6%)

Query: 56  EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGF-YYDFDKEQPF 114
             S++       R    + HS  H++  A++ +  +     G ++ D +  +DF   +  
Sbjct: 545 NDSVDANVDSQRRDRIRLNHSATHLLHAALRQVLGDHVAQKGSLVNDSYLRFDFSHTEAM 604

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
             +++ Q+E  +   I R+       ++ + AR          K          ++V + 
Sbjct: 605 KPEQIRQVEDIVNAQIRRNLTVQTDVMALDDARAKGAMALFGEKY--------DDHVRVL 656

Query: 175 RQGEW-FDLCRGPHVRSTGQVKKFFKLMKVA 204
             G++  +LC G H   TG +  F  + +  
Sbjct: 657 TMGDFSIELCGGTHASRTGDIGLFQIISESG 687


>gi|163868621|ref|YP_001609830.1| alanyl-tRNA synthetase [Bartonella tribocorum CIP 105476]
 gi|205829989|sp|A9IVY8|SYA_BART1 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|161018277|emb|CAK01835.1| Alanyl-tRNA synthetase [Bartonella tribocorum CIP 105476]
          Length = 888

 Score = 64.4 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 36/174 (20%), Positives = 71/174 (40%), Gaps = 6/174 (3%)

Query: 36  KKAVAVAIN-GKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           KKA  V I+ GKV      + +  +++      R      HS  H++ EA++ +      
Sbjct: 525 KKADGVFIHLGKVKSGHAKISDC-VQLTVDVVRRKKIRANHSATHLLHEALRQVLGSHVT 583

Query: 95  AIGPIIEDG-FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESK 153
             G ++      +DF   +  S +EL +IE    EI+ +++    + ++ ++A       
Sbjct: 584 QKGSLVSPERLRFDFSHPKSVSLEELKKIEDLANEIVLQNNKVTTRLMAVDEAISEGAMA 643

Query: 154 KEAYKVE---ILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVA 204
               K E    + S+ A       ++    +LC G HV  TG +     + + +
Sbjct: 644 LFGEKYEDEVRVVSMGAPLEQGGLKKHWSIELCGGTHVERTGDIGLIHIVSESS 697


>gi|307294312|ref|ZP_07574156.1| seryl-tRNA synthetase [Sphingobium chlorophenolicum L-1]
 gi|306880463|gb|EFN11680.1| seryl-tRNA synthetase [Sphingobium chlorophenolicum L-1]
          Length = 425

 Score = 64.4 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 31/175 (17%), Positives = 61/175 (34%), Gaps = 15/175 (8%)

Query: 273 WKIFQTLISYM--RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M  R+  ++ YEE+N P ++       +G    +  ++F          D
Sbjct: 171 ARLHRALAQFMLDRQSGENGYEEVNPPLLVKDDALFGTGQLPKFAEDLFRTT-------D 223

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFT 387
            R     P        +    +     LP+RL      +R+E   +     G +R   F 
Sbjct: 224 GRWLI--PTAEVSLTNLVRERIVPVDSLPLRLTALTPCFRSEAGSAGRDTRGFIRQHQFE 281

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWD 442
           + +    C  E+   E  ++      + +  G     + L T      G+   WD
Sbjct: 282 KVELVAICKPEESEAEHERMCAAAEGVLQALGLPYRKMLLCTGDMGF-GARKTWD 335


>gi|269792643|ref|YP_003317547.1| alanyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM 6589]
 gi|269100278|gb|ACZ19265.1| alanyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM 6589]
          Length = 882

 Score = 64.4 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 36/140 (25%), Positives = 62/140 (44%), Gaps = 9/140 (6%)

Query: 65  EDPRSLAVIRH-SCAHIMAEAVQSIWPEVQVAIGPIIEDGFY-YDFDKEQPFSSDELAQI 122
           +  R   + RH +  HI+ EA+  +        G  + DGF+ +DF+   P S +E+A++
Sbjct: 554 DGERRWHIRRHHTATHILHEALGRVLGGHVRQSGSWVGDGFFRFDFNHFSPLSDEEIARV 613

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E  + ++I  D        S + ARE+        K   +  + + E       G   +L
Sbjct: 614 EDLVNQVILEDRRVTTLETSMDSAREMGAKALFDEKYGQVVRVVSVE-------GFSTEL 666

Query: 183 CRGPHVRSTGQVKKFFKLMK 202
           C G HV S+GQ+  F    +
Sbjct: 667 CGGTHVSSSGQIGLFKIQRE 686


>gi|226309605|ref|YP_002769499.1| seryl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
 gi|254783010|sp|C0ZH54|SYS_BREBN RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|226092553|dbj|BAH40995.1| seryl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
          Length = 426

 Score = 64.4 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 35/223 (15%), Positives = 83/223 (37%), Gaps = 21/223 (9%)

Query: 242 EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEIN 295
           E + H +LA +  +          GS  +F+   G ++ + L+++M     +   YEE+ 
Sbjct: 136 EIKPHWELASQAGILDFETAAKVTGSRFVFYKGLGARLERALMNFMMDLHSNEHGYEEVI 195

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
            P ++++     +G    +  + F ++  D        + L P        +    +   
Sbjct: 196 PPFIVNRTSMTGTGQLPKFEEDAFKIEGPD--------YFLIPTAEVPVTNMHRDEIMDG 247

Query: 356 RELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
            +LP     F + +R+E   +     GL+R   F + +   F   E+ ++E  K+     
Sbjct: 248 ADLPRYYTAFSACFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEESYDELDKLVKNAE 307

Query: 413 SIYKDFGFEKIMVKLSTRPEKRVG----SDALWDDAENIMKGV 451
            + +  G    ++ + T              +W  + +  + +
Sbjct: 308 KVLQLLGLPYRVLSMCTGDLGFTAAKKFDIEVWIPSGDTYREI 350


>gi|203284140|ref|YP_002221880.1| alanyl-tRNA synthetase [Borrelia duttonii Ly]
 gi|201083583|gb|ACH93174.1| alanyl-tRNA synthetase [Borrelia duttonii Ly]
          Length = 592

 Score = 64.4 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 51/130 (39%), Gaps = 10/130 (7%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           H+  H++ +A+Q +  +     G  I      +DF      + DE+ ++E  +   I   
Sbjct: 456 HTATHLLHKALQLVLGDHVRQKGSNITSQRLRFDFSHPCKMTDDEIKKVEDIVNLQIKNK 515

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTG 192
               K  +S E A           K E +        V++Y    +  ++C GPHV +T 
Sbjct: 516 LSVKKSIMSLEDALVKGAMALFGEKYEDI--------VSVYEIDGFSIEVCGGPHVNNTS 567

Query: 193 QVKKFFKLMK 202
           ++  F    +
Sbjct: 568 ELGTFKIQKE 577


>gi|119945378|ref|YP_943058.1| seryl-tRNA synthetase [Psychromonas ingrahamii 37]
 gi|166223274|sp|A1SVE4|SYS_PSYIN RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|119863982|gb|ABM03459.1| seryl-tRNA synthetase [Psychromonas ingrahamii 37]
          Length = 428

 Score = 64.4 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 64/188 (34%), Gaps = 12/188 (6%)

Query: 273 WKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            K+ + L  YM         Y E+  P +++      +G    +  ++F  K A    ++
Sbjct: 170 AKLHRALAQYMLDLHTDHHGYTEMYVPYLVNADSLYGTGQLPKFGDDLFNTKPA---TEE 226

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
               +L P        +    +    +LP++L      +R+E         GL+R   F 
Sbjct: 227 GIGMSLIPTAEVPLTNMSRDMIYDESDLPLKLTAHTPCFRSEAGSYGRDTRGLIRQHQFD 286

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +   F   E+ F    ++      + K+       V L T              +W  
Sbjct: 287 KVEMVQFVHPEKSFEALEELTGHAEQVLKNLQLPYRKVVLCTGDMGFGATKTYDLEVWLP 346

Query: 444 AENIMKGV 451
           A++  + +
Sbjct: 347 AQDQYREI 354


>gi|254973664|ref|ZP_05270136.1| seryl-tRNA synthetase [Clostridium difficile QCD-66c26]
 gi|255091055|ref|ZP_05320533.1| seryl-tRNA synthetase [Clostridium difficile CIP 107932]
 gi|255312709|ref|ZP_05354292.1| seryl-tRNA synthetase [Clostridium difficile QCD-76w55]
 gi|255515469|ref|ZP_05383145.1| seryl-tRNA synthetase [Clostridium difficile QCD-97b34]
 gi|255648561|ref|ZP_05395463.1| seryl-tRNA synthetase [Clostridium difficile QCD-37x79]
 gi|260681783|ref|YP_003213068.1| seryl-tRNA synthetase [Clostridium difficile CD196]
 gi|260685380|ref|YP_003216513.1| seryl-tRNA synthetase [Clostridium difficile R20291]
 gi|306518690|ref|ZP_07405037.1| seryl-tRNA synthetase [Clostridium difficile QCD-32g58]
 gi|260207946|emb|CBA60065.1| seryl-tRNA synthetase [Clostridium difficile CD196]
 gi|260211396|emb|CBE01468.1| seryl-tRNA synthetase [Clostridium difficile R20291]
          Length = 423

 Score = 64.4 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 47/356 (13%), Positives = 114/356 (32%), Gaps = 35/356 (9%)

Query: 105 YYDFDKEQPFSSDELAQIEKKMQEIIARDSPFL----KQYLSHEKARELFESKKEAYKVE 160
             D  + +    D    +E++ +     D+       ++ +  E      E    + K+ 
Sbjct: 1   MLDIKRIRENLDDIKKAMERRGEREFDLDAVVELDNKRREILQEVEVMKNELNVNSKKIP 60

Query: 161 ILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRI 220
            L            R  E  D  +G        + +  K ++    Y            +
Sbjct: 61  QLIKEGKDVTEEKTRLKELSDKIKG--------IDEKVKEVEAKMEYTLMRIPNVPHPEV 112

Query: 221 -YGTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWK 274
             G       ++  +    +   E + H  +   + +          GS    +   G +
Sbjct: 113 PQGETDEDNVQIRTWGEPTKFDFEYKAHWDIGTGLGILDFERAGKITGSRFTLYRGLGAR 172

Query: 275 IFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           + ++L+++          Y E+  P + +++ +  +G    +  +MF +        +  
Sbjct: 173 LERSLMNFFLNTHTAKHGYTEVLPPFMANRNSFIGTGQLPKFEEDMFKI--------EGL 224

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQD 389
            + L P        +  + +    ELP++   +   +R+E   +     GL+R   F + 
Sbjct: 225 EYFLIPTAEVPVTNIHANEILDVAELPIKYCAYTPCFRSEAGSAGRDTRGLVRQHQFNKV 284

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALW 441
           +   F   E  +NE   + +   ++ +  G    +VK+ T              +W
Sbjct: 285 ELVKFVKPEDSYNELESLTHDAETMLQMLGLPYRVVKICTGDLGFTAAFKYDLEVW 340


>gi|325336815|gb|ADZ13089.1| threonyl-tRNA synthetase [Riemerella anatipestifer RA-GD]
          Length = 50

 Score = 64.4 bits (155), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 26/46 (56%)

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           +KKIP ++I G+ EA  +++ +R+ G     ++S+   +     E+
Sbjct: 1   MKKIPFMLIVGENEAGNQTVSVRKRGEGDLGEMSIESFVEYFKNEA 46


>gi|325297897|ref|YP_004257814.1| seryl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
 gi|324317450|gb|ADY35341.1| seryl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
          Length = 424

 Score = 64.4 bits (155), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 75/214 (35%), Gaps = 20/214 (9%)

Query: 245 DHRKLAREMDLFHIA----EDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQV 299
            H +LA++ +L          G+G   +  +G ++ + LI++ +       YEEI  P V
Sbjct: 143 PHWELAKKYNLIDFDLGVKITGAGFPVYRGQGARLQRALINFFLDEARAAGYEEIMPPTV 202

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           ++            Y       K       +L    L P        ++   +   ++LP
Sbjct: 203 VNA--------ASGYGTGQLPDKEGQMYHCNLDDLYLIPTAEVPVTNIYRDVILDEKQLP 254

Query: 360 VRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ++   +   +R E       + GL R+  F++ +     T E       ++ + +  + K
Sbjct: 255 IKNCAYTECFRREAGSYGKDVRGLNRLHEFSKVELVRIDTPEHSRQSHQEMLDHVEGLLK 314

Query: 417 DFGFEKIMVKLSTRPEKRV----GSDALWDDAEN 446
                  +++L                ++ +A+ 
Sbjct: 315 KLELPYRILRLCGGDISFTAAICYDFEVYSEAQK 348


>gi|291544162|emb|CBL17271.1| alanyl-tRNA synthetase [Ruminococcus sp. 18P13]
          Length = 883

 Score = 64.4 bits (155), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 47/241 (19%), Positives = 82/241 (34%), Gaps = 54/241 (22%)

Query: 1   MPSDIKL--TFPDG----SIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPV 54
           M    K+   F DG    SI+         DVA  I   L +        G+V D  + V
Sbjct: 464 MSCGAKILGIFADGKQVDSIRE-------GDVAALI---LDRTPFYAESGGQVADTGEIV 513

Query: 55  REGSIEIITPE------------------------------DPRSLAVIRHSCAHIMAEA 84
             G+  +   +                              D R   +  H+ AH++  A
Sbjct: 514 GNGAFAVADVKKLESGHFMHMGSLEDGILKVGDEVSAQIDADRRMSIMRNHTAAHLLQAA 573

Query: 85  VQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSH 143
           ++ +  +     G  +  +   +DF      +S+EL  +E  +   I    P   Q +  
Sbjct: 574 LRQVLGDHVHQAGQLVNAEHCRFDFSHFNAMTSEELQAVEDLVNRKIFEALPITMQEMPI 633

Query: 144 EKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKV 203
           E+AR+L        K   +  + + E       G   + C G H+ +T +V  F  L + 
Sbjct: 634 EEARKLGAMALFGEKYGNIVRVVSME-------GFSTEFCGGTHLDNTSRVGLFKILSES 686

Query: 204 A 204
           +
Sbjct: 687 S 687


>gi|323137975|ref|ZP_08073049.1| alanyl-tRNA synthetase [Methylocystis sp. ATCC 49242]
 gi|322396694|gb|EFX99221.1| alanyl-tRNA synthetase [Methylocystis sp. ATCC 49242]
          Length = 889

 Score = 64.0 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 34/148 (22%), Positives = 61/148 (41%), Gaps = 10/148 (6%)

Query: 54  VREGSIEI-----ITPEDPRSLAVI-RHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYY 106
           V EG I       +  +  R  A    HS  HI+ EA++ +  +     G  +  +   +
Sbjct: 537 VEEGEIVPGVVLELDVDHERRRATRANHSATHILHEALRQVLGDHVAQKGSLVAPERLRF 596

Query: 107 DFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE--LFESKKEAYKVEILES 164
           DF   +P + +ELA++E    EI+  ++P   + ++ + A          E Y  E+   
Sbjct: 597 DFTHPKPLTEEELARVEALANEIVQDNAPVDTRLMAQDDAIRSGARALFGEKYGDEVRVV 656

Query: 165 IPAKENVTLYRQGEWFDLCRGPHVRSTG 192
              + +  +       +LC G HV  TG
Sbjct: 657 SMGRPDPGVAHP-FSVELCGGTHVSRTG 683


>gi|309388302|gb|ADO76182.1| seryl-tRNA synthetase [Halanaerobium praevalens DSM 2228]
          Length = 422

 Score = 64.0 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 39/244 (15%), Positives = 83/244 (34%), Gaps = 22/244 (9%)

Query: 222 GTAWNTQQELTQYLYFLEESEKR-DHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIF 276
           G+     +E+ ++    +       H  L  ++D+          G+   F    G ++ 
Sbjct: 114 GSDEADNKEIKKWGEPRKFDFDYKAHWDLGEDLDILDFERGGKVTGTRFTFLKGAGARLE 173

Query: 277 QTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           + LI++M     D   Y+E+  P + +      +G    +  +MF ++  D        +
Sbjct: 174 RALINFMLNLHTDEHGYKEVFPPFIANADSMTGTGQLPKFEKDMFKLEGLD--------Y 225

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDA 391
            L P        ++   +    +LP  L  + + +R E         G++R   F + + 
Sbjct: 226 YLIPTAEVPVTNMYRDEILDVEQLPEYLTAYSACFRAEAGAHGRDTRGIIRQHQFNKVEM 285

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENI 447
             F   E  + E  KI      + +       +V L T              +W  A + 
Sbjct: 286 VKFVKPEDSYAELEKITADAEDVLQRLELPYRVVSLCTGDLTFSSAKTYDLEVWMPAYDS 345

Query: 448 MKGV 451
            + +
Sbjct: 346 YREI 349


>gi|260911944|ref|ZP_05918509.1| serine-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295]
 gi|260633967|gb|EEX52092.1| serine-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295]
          Length = 429

 Score = 64.0 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 39/339 (11%), Positives = 99/339 (29%), Gaps = 30/339 (8%)

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPA-KENVTLYRQGE 178
             +EK ++    R     K   + ++A  + +      K    +     K  V +Y++ +
Sbjct: 28  EAVEKVLETDKRRREAQQKLDKNKQEANSMSKQIGMLMKDGKTQEAEEVKAKVAVYKEND 87

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKV---AGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
                +     +  ++      +            D+N  ++ +  G      ++   + 
Sbjct: 88  --KQLQTLMAEAEQELTALLCNIPNIPADNVPEGKDANDNVVVKEGGVIPQLPEDALCHW 145

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEI 294
              ++    D     +           +G   +  K  ++ + L ++   + +   Y E+
Sbjct: 146 DLCKKYNLIDFDLGVKITG--------AGFPIYIGKMARLQRALEAFFLEEARKSGYLEV 197

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
             P V++            Y       K       +     L P        +F   +  
Sbjct: 198 QPPLVVN--------QASGYGTGQLPDKEGQMYHAEQDDLYLIPTAEVPVTNIFRDVILD 249

Query: 355 YRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI 411
            ++LPV    + + +R E       + GL R+  F + +       E       K+   +
Sbjct: 250 EKDLPVMRCAYSACFRREAGSYGKDVRGLNRLHQFDKVEIVRIDKPEHSHESHKKMLEHV 309

Query: 412 ISIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAEN 446
             + +       ++ L                +W  A+ 
Sbjct: 310 EGLLQKLELPYHILLLCGGDMSFTASICYDFEVWSAAQK 348


>gi|299820883|ref|ZP_07052772.1| serine--tRNA ligase [Listeria grayi DSM 20601]
 gi|299817904|gb|EFI85139.1| serine--tRNA ligase [Listeria grayi DSM 20601]
          Length = 429

 Score = 64.0 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 36/244 (14%), Positives = 90/244 (36%), Gaps = 22/244 (9%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIF 276
           G   +   E+ ++    + + E + H  L  ++D+          GS  +F+ + G ++ 
Sbjct: 115 GETEDDNVEIRKWGEVRDFTFEPKAHWDLGTDLDILDFERAAKVTGSRFVFYKKLGARLE 174

Query: 277 QTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           + L+++M     D   Y+EI  P ++++     +G    +  + F V        +   +
Sbjct: 175 RALLNFMMDLHADEHGYDEILPPYMVNRVSMTGTGQLPKFEEDAFLV--------EKEDY 226

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDA 391
            L P        +    +   ++LP +   F + +R+E   +     GL+R   F + + 
Sbjct: 227 FLIPTAEVPVTNLHRDEIFQAKDLPRKYTAFSACFRSEAGSAGRDTRGLIRQHQFNKVEL 286

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENI 447
             F   E  +    K+ +    + +       ++ + T              +W  + + 
Sbjct: 287 VQFVKPEDSYEALEKLTDNAEEVLRRLELPYRVLSMCTADLGFTAAKKYDIEVWIPSYDS 346

Query: 448 MKGV 451
            + +
Sbjct: 347 YREI 350


>gi|321313681|ref|YP_004205968.1| seryl-tRNA synthetase [Bacillus subtilis BSn5]
 gi|320019955|gb|ADV94941.1| seryl-tRNA synthetase [Bacillus subtilis BSn5]
          Length = 425

 Score = 64.0 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 38/244 (15%), Positives = 88/244 (36%), Gaps = 22/244 (9%)

Query: 222 GTAWNTQQELTQYLYFLEE-SEKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIF 276
           G   +   E+ ++        E + H  +A E+ +          GS  +F+   G ++ 
Sbjct: 115 GETEDDNVEVRKWGEKPSFAYEPKPHWDIADELGILDFERAAKVTGSRFVFYKGLGARLE 174

Query: 277 QTLISYMRRKIKDDYE--EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           + L ++M     D+Y   E+  P ++++     +G    +  + F ++           +
Sbjct: 175 RALYNFMLDLHVDEYNYTEVIPPYMVNRASMTGTGQLPKFEEDAFKIR--------EEDY 226

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDA 391
            L P        +    + S   LP+  A F + +R+E   +     GL+R   F + + 
Sbjct: 227 FLIPTAEVPITNMHRDEILSGDSLPINYAAFSACFRSEAGSAGRDTRGLIRQHQFNKVEL 286

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENI 447
             F   E  + E  K+ N    + +       ++ + T              +W  +++ 
Sbjct: 287 VKFVKPEDSYEELEKLTNQAERVLQLLELPYRVMSMCTGDLGFTAAKKYDIEVWIPSQDT 346

Query: 448 MKGV 451
            + +
Sbjct: 347 YREI 350


>gi|302798685|ref|XP_002981102.1| hypothetical protein SELMODRAFT_268427 [Selaginella moellendorffii]
 gi|300151156|gb|EFJ17803.1| hypothetical protein SELMODRAFT_268427 [Selaginella moellendorffii]
          Length = 676

 Score = 64.0 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 40/211 (18%), Positives = 74/211 (35%), Gaps = 31/211 (14%)

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
           K VL++++  S + +   V   E A   P    +  D+  + +      VD  +  +   
Sbjct: 450 KLVLESLEKLSSEEVVEMVAKLESAGEAP----LHSDSTDKTFTIKKGMVDKQVTKK--- 502

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG--------------NLPLWLSPIQ 554
                  E   P +I       I R I  + E+                   P  ++P++
Sbjct: 503 ---TKDKESFTPSVI--EPSFGIGRIIYCLFEHCFDTREGADSVEQLNFFRFPPVVAPVK 557

Query: 555 AIV--TTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
             V      +   E AQ I+  L+   L+++TD    +I  +        IP  I     
Sbjct: 558 CSVFSLVQNAGLDELAQSISVELRRAGLAVKTDITGRSIGKRYARTDEIGIPFAITV--- 614

Query: 613 EASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           ++SE  + +R   S    +V +     +LT 
Sbjct: 615 DSSEGGVTVRDRDSKEQIRVPVEQVTQLLTD 645



 Score = 40.2 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 4/65 (6%)

Query: 335 ALKPMNCPGHVAVFNHGLKSYR--ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
            L+P    G    F + L  Y   +LP   A+ G  +RNE S    GL+RVR FT  +  
Sbjct: 232 YLRPETAQGMFVNF-NELLLYNGGKLPFGAAQVGQAFRNEISPR-QGLLRVREFTLAEIE 289

Query: 393 VFCTK 397
            F   
Sbjct: 290 FFVDP 294


>gi|302761720|ref|XP_002964282.1| hypothetical protein SELMODRAFT_230438 [Selaginella moellendorffii]
 gi|300168011|gb|EFJ34615.1| hypothetical protein SELMODRAFT_230438 [Selaginella moellendorffii]
          Length = 604

 Score = 64.0 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 24/152 (15%), Positives = 49/152 (32%), Gaps = 20/152 (13%)

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG------------NLPLWLSPI 553
           FN        EK  P +I       I R I  + E+                 P  ++P+
Sbjct: 430 FNKQVTKKSKEKFTPSVI--EPSFGIGRIIYCLFEHCFDTRGGVDGQLNVFRFPPLVAPV 487

Query: 554 QAIV--TTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
           +  V            A+ I+  L+   +  + D    +I  +        +P  I    
Sbjct: 488 KCTVFPLVQNPKLDGIARAISAKLREAGIGNKIDTTGRSIGRRYARTDEIGVPFAITV-- 545

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            ++ +  + +R   S    +V L + + ++  
Sbjct: 546 -DSEDG-VTVRDRDSKDQIRVPLEEVVDLIAD 575



 Score = 39.0 bits (89), Expect = 2.6,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 41/104 (39%), Gaps = 5/104 (4%)

Query: 335 ALKPMNCPGHVAVFNHGLKSYR--ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
            L+P    G    F + L  Y   +LP   A+ G  +RNE +    GL+RVR FT  +  
Sbjct: 165 YLRPETAQGIFVNF-NELLYYNGGKLPFGAAQIGQAFRNEIAPR-QGLLRVREFTLAEIE 222

Query: 393 VFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
            F    ++   +   + +L   +Y       +   +  R    V
Sbjct: 223 FFVDPADKSHPKFASVADLEFFLYPRAEQMSLKDPVKVRLGHAV 266


>gi|269140202|ref|YP_003296903.1| alanyl-tRNA synthetase [Edwardsiella tarda EIB202]
 gi|267985863|gb|ACY85692.1| alanyl-tRNA synthetase [Edwardsiella tarda EIB202]
 gi|304560033|gb|ADM42697.1| Alanyl-tRNA synthetase [Edwardsiella tarda FL6-60]
          Length = 875

 Score = 64.0 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 53/132 (40%), Gaps = 10/132 (7%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H+M  A++S+  E     G ++ DG   +DF   +     ++ Q+E  +   I R+
Sbjct: 564 HSATHLMHAALRSVLGEHVAQKGSLVSDGALRFDFSHAEAMKPQQIRQVEDIVNAQIRRN 623

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTG 192
            P   Q +  E+A+          K            V +   G++  +LC G H   TG
Sbjct: 624 LPIDTQEMGLEEAKAKGAMALFGEKY--------DAQVRVLSMGDFSTELCGGTHAERTG 675

Query: 193 QVKKFFKLMKVA 204
            +  F  + +  
Sbjct: 676 DIGLFRIVSESG 687


>gi|253578839|ref|ZP_04856110.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251849782|gb|EES77741.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 879

 Score = 64.0 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 30/149 (20%), Positives = 61/149 (40%), Gaps = 10/149 (6%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSS 116
           ++ +   E  R      HS  H++ +A++++        G  +  D   +DF   Q  ++
Sbjct: 549 TVSLKVDEAARRDTEKNHSATHLLQKALKTVLGNHVEQKGSLVTPDRLRFDFAHFQAMTA 608

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
           DE+AQ+E  + + I          +  E+A++         K          + V +   
Sbjct: 609 DEIAQVEALVNKEIQAGLEVRTDVMDVEEAKKSGAMALFGEKY--------DQKVRVVSM 660

Query: 177 GEW-FDLCRGPHVRSTGQVKKFFKLMKVA 204
           G++  +LC G HV +TG +  F  + +  
Sbjct: 661 GDFSKELCGGTHVANTGNIMLFKIVSESG 689


>gi|221506889|gb|EEE32506.1| glycyl-tRNA synthetase, putative [Toxoplasma gondii VEG]
          Length = 771

 Score = 64.0 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 21/106 (19%), Positives = 43/106 (40%), Gaps = 2/106 (1%)

Query: 540 ENFKGNLPLWLSPIQAIVTTIT--SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           E      P  ++P + I+  I+   S VE  Q   +   +  +S + D    +I  +   
Sbjct: 643 ERCYMAFPAIIAPTKCIILPISSNPSFVELLQRARDACVARGISAKVDASTASIGKRYAR 702

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +     P  I    +   + ++ +R   S    +VSL DA+ ++ +
Sbjct: 703 NDEVGTPFAITVDFESLKDDTVTVRERDSMEQIRVSLSDAVDLVAR 748


>gi|58040217|ref|YP_192181.1| alanyl-tRNA synthetase [Gluconobacter oxydans 621H]
 gi|81556989|sp|Q5FQ21|SYA_GLUOX RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|58002631|gb|AAW61525.1| Alanyl-tRNA synthetase [Gluconobacter oxydans 621H]
          Length = 879

 Score = 64.0 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 54/136 (39%), Gaps = 9/136 (6%)

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIAR 132
            HS  H++ EA++          G     +   +D  + +P + +ELA +E ++   I  
Sbjct: 564 HHSATHLLHEALRRQIGTHVTQKGSLNAPERLRFDISQPRPLTDEELAAVEAEVNARIRE 623

Query: 133 DSPFLKQYLSHEKARELFESKKEAYK----VEILESIPAKENVTLYRQGEWFDLCRGPHV 188
           ++P   + ++ E+A           K    V ++      ++   Y      +LC G HV
Sbjct: 624 NAPVETRLMTQEEAVAEGAMALFGEKYGDEVRVVSMGKGDDDRPAY----SIELCGGTHV 679

Query: 189 RSTGQVKKFFKLMKVA 204
              G++  F  + +  
Sbjct: 680 GRVGEIGPFRIVSESG 695


>gi|302815693|ref|XP_002989527.1| hypothetical protein SELMODRAFT_269525 [Selaginella moellendorffii]
 gi|300142705|gb|EFJ09403.1| hypothetical protein SELMODRAFT_269525 [Selaginella moellendorffii]
          Length = 597

 Score = 64.0 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 25/152 (16%), Positives = 51/152 (33%), Gaps = 20/152 (13%)

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG------------NLPLWLSPI 553
           FN        EK  P +I       I R I  + E+                 P  ++P+
Sbjct: 423 FNKQVTKKSKEKFTPSVI--EPSFGIGRIIYCLFEHCFDTRGGVDGQLNVFRFPALVAPV 480

Query: 554 QAIV--TTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
           +  V          E A+ I+  L+   ++ + D    +I  +        +P  I    
Sbjct: 481 KCTVFPLVQNPKLDEIARAISAKLREAGIANKIDTTGRSIGRRYARTDEIGVPFAITV-- 538

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            ++ +  + +R   S    +V L + + ++  
Sbjct: 539 -DSEDG-VTVRDRDSKDQIRVPLEEVVDLIAD 568



 Score = 39.0 bits (89), Expect = 2.7,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 41/104 (39%), Gaps = 5/104 (4%)

Query: 335 ALKPMNCPGHVAVFNHGLKSYR--ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
            L+P    G    F + L  Y   +LP   A+ G  +RNE +    GL+RVR FT  +  
Sbjct: 158 YLRPETAQGIFVNF-NELLYYNGGKLPFGAAQIGQAFRNEIAPR-QGLLRVREFTLAEIE 215

Query: 393 VFCTK-EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
            F    ++   +   + +L   +Y       +   +  R    V
Sbjct: 216 FFVDPADKSHPKFASVADLEFFLYPRAEQMSLKDPVKVRLGHAV 259


>gi|237831297|ref|XP_002364946.1| glycyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
 gi|211962610|gb|EEA97805.1| glycyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
          Length = 771

 Score = 64.0 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 21/106 (19%), Positives = 43/106 (40%), Gaps = 2/106 (1%)

Query: 540 ENFKGNLPLWLSPIQAIVTTIT--SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           E      P  ++P + I+  I+   S VE  Q   +   +  +S + D    +I  +   
Sbjct: 643 ERCYMAFPAIIAPTKCIILPISSNPSFVELLQRARDACVARGISAKVDASTASIGKRYAR 702

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +     P  I    +   + ++ +R   S    +VSL DA+ ++ +
Sbjct: 703 NDEVGTPFAITVDFESLKDDTVTVRERDSMEQIRVSLSDAVDLVAR 748


>gi|288960191|ref|YP_003450531.1| alanyl-tRNA synthetase [Azospirillum sp. B510]
 gi|288912499|dbj|BAI73987.1| alanyl-tRNA synthetase [Azospirillum sp. B510]
          Length = 889

 Score = 64.0 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 58/142 (40%), Gaps = 4/142 (2%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSD 117
           +E+      R+     HS  H++ EA++    +     G  +  +   +D  +    ++ 
Sbjct: 549 VELRVDSSRRAAIRANHSATHLLHEALRHRLGDHVTQKGSLVAPERLRFDISQPTGLTAA 608

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARE--LFESKKEAYKVEILESIPAKENVTLYR 175
           ++A IE ++   +  +S  + + +S ++AR         E Y  E+   +          
Sbjct: 609 DIAAIEDEVNRRVLANSEVVTRLMSPDEARAQGAMALFGEKYGDEV-RVVSMGGPHGELD 667

Query: 176 QGEWFDLCRGPHVRSTGQVKKF 197
           +    +LC G HVR TG +  F
Sbjct: 668 RDYSIELCGGTHVRRTGDIGVF 689


>gi|261417513|ref|YP_003251195.1| seryl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|319765171|ref|YP_004130672.1| seryl-tRNA synthetase [Geobacillus sp. Y412MC52]
 gi|261373970|gb|ACX76713.1| seryl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|317110037|gb|ADU92529.1| seryl-tRNA synthetase [Geobacillus sp. Y412MC52]
          Length = 424

 Score = 64.0 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 43/244 (17%), Positives = 91/244 (37%), Gaps = 22/244 (9%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAED----GSGVIFWHRKGWKIF 276
           G +     E+ ++      S E + H ++A  + L          GS  +F+   G ++ 
Sbjct: 115 GQSEEDNVEVRRWGEPRSFSFEPKPHWEIADRLGLLDFERAAKVAGSRFVFYKGLGARLE 174

Query: 277 QTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           + LI++M     D   YEE+  P ++++     +G    +  ++F +        D   +
Sbjct: 175 RALINFMLDIHLDEFGYEEVLPPYLVNRASMIGTGQLPKFAEDVFHL--------DSEDY 226

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDA 391
            L P        +    + +  +LP+  A + + +R E   +     GL+R   F + + 
Sbjct: 227 FLIPTAEVPVTNLHRDEILAADDLPIYYAAYSACFRAEAGSAGRDTRGLIRQHQFNKVEL 286

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENI 447
             F   E  ++E  K+     +I +  G    +V L T              +W  +   
Sbjct: 287 VKFVKPEDSYDELEKLTRQAETILQRLGLPYRVVALCTGDLGFSAAKTYDIEVWLPSYGT 346

Query: 448 MKGV 451
            + +
Sbjct: 347 YREI 350


>gi|194435163|ref|ZP_03067396.1| seryl-tRNA synthetase [Shigella dysenteriae 1012]
 gi|194416601|gb|EDX32737.1| seryl-tRNA synthetase [Shigella dysenteriae 1012]
          Length = 430

 Score = 64.0 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 64/188 (34%), Gaps = 10/188 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M     +   Y E   P +++Q     +G    +  ++F  +  ++   D
Sbjct: 170 ARMHRALSQFMLDLHTEQHGYSENYVPYLVNQDTLYGTGQMPKFAGDLFHTRPLEEEA-D 228

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
              +AL P        +    +    +LP+++      +R+E         GL+R+  F 
Sbjct: 229 TSNYALIPTAEVPLTNLVRGEIIDEDDLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFD 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E       ++      + +  G     + L T              +W  
Sbjct: 289 KVEMVQIVRPEDSMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMGFGACKTYDLEVWIP 348

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 349 AQNTYREI 356


>gi|110669023|ref|YP_658834.1| seryl-tRNA synthetase [Haloquadratum walsbyi DSM 16790]
 gi|121684671|sp|Q18FL9|SYS_HALWD RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|109626770|emb|CAJ53238.1| serine--tRNA ligase [Haloquadratum walsbyi DSM 16790]
          Length = 460

 Score = 64.0 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 31/213 (14%), Positives = 74/213 (34%), Gaps = 12/213 (5%)

Query: 241 SEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKG--WKIFQTLISYMRRKIKD-DYEEIN 295
                H  L  E+++  F      +G  F+  KG   ++   L+ +M    ++  Y+++ 
Sbjct: 139 DTVIPHYDLGEELEILDFERGAKVTGGGFYFAKGDGARLEHALVQFMLDIHREQGYQDVF 198

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
            P  ++      +G +  +  + + +   +D   D     L P        ++   +   
Sbjct: 199 PPIPVNSQSMVGTGQFPKFTEDAYRIGETNDEPWDNDDLWLCPTAEVPVTNMYRDEILLD 258

Query: 356 RELPVRLAEFGSVYRNEPSG---SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
            +LPV++  +   +R E         G++RV  F + +   F   E        +     
Sbjct: 259 DDLPVKIQAYTPNFRREAGEHGTETRGIVRVHQFNKVELVNFVRPEDSAERFDGLLTEAE 318

Query: 413 SIYKDFGFEKIMVKLSTRPEKRV----GSDALW 441
            + +  G    ++++ T              +W
Sbjct: 319 VVLQRLGLPYRILEMCTGDLGFTQRKKYDIEVW 351


>gi|28377392|ref|NP_784284.1| seryl-tRNA synthetase [Lactobacillus plantarum WCFS1]
 gi|38258545|sp|Q88Z60|SYS1_LACPL RecName: Full=Seryl-tRNA synthetase 1; AltName: Full=Serine--tRNA
           ligase 1; Short=SerRS 1; AltName:
           Full=Seryl-tRNA(Ser/Sec) synthetase 1
 gi|28270224|emb|CAD63125.1| serine--tRNA ligase [Lactobacillus plantarum WCFS1]
          Length = 423

 Score = 64.0 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 38/241 (15%), Positives = 85/241 (35%), Gaps = 25/241 (10%)

Query: 210 GDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWH 269
            D +  +  R +G       +   +    E     D  + A+      +    +      
Sbjct: 116 PDEDSNVEMRKHGDIPTFDFKPKAHWELGESLGILDFDRAAKVAGARFVYYKDA------ 169

Query: 270 RKGWKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
             G  + + + S+M      K  Y EI  P +++      +G +  ++ +++ V+ +  T
Sbjct: 170 --GALLERAVYSFMLDLHTQKQGYHEIIPPYLVNAQTMYGTGQFPKFKEDVYTVESSGMT 227

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVR 384
           +         P         + + + S  +LP         YR+E   +     GL+R+ 
Sbjct: 228 LI--------PTAEVPLTNYYANEILSEDQLPTYFTAMTPCYRSEAGSAGRDTRGLIRMH 279

Query: 385 GFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDAL 440
            F + +   +C  E  ++E  K+ +    + ++ G    ++KLST              +
Sbjct: 280 QFHKVEMVKYCKPENSYDELEKLTDNAEEVLRELGLAYHVIKLSTGDTGFSSAKTYDVEV 339

Query: 441 W 441
           W
Sbjct: 340 W 340


>gi|332969140|gb|EGK08172.1| alanine--tRNA ligase [Kingella kingae ATCC 23330]
          Length = 900

 Score = 64.0 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 40/164 (24%), Positives = 67/164 (40%), Gaps = 12/164 (7%)

Query: 36  KKAVAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVA 95
           K AV     G V   S  + +  +  +      S+    HS  H+M +A++ +  E    
Sbjct: 552 KAAVTGQF-GAVVSGSLKIGDTVVAEVDNAIRDSI-TRNHSVTHLMHKALRDVLGEHVEQ 609

Query: 96  IGPIIEDGF-YYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            G +       +D    Q  ++DE+AQIE+K+   I  + P   + +S E A++      
Sbjct: 610 KGSLQNAELTRFDISHNQAITADEIAQIERKVNAAIIANVPVKVETMSIEDAQKSGAMML 669

Query: 155 EAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
              K          + V +   GE+  +LC G HV  TG +  F
Sbjct: 670 FGEKY--------GDFVRVVTMGEYSTELCGGTHVARTGDIGLF 705


>gi|297539363|ref|YP_003675132.1| alanyl-tRNA synthetase [Methylotenera sp. 301]
 gi|297258710|gb|ADI30555.1| alanyl-tRNA synthetase [Methylotenera sp. 301]
          Length = 901

 Score = 64.0 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 30/131 (22%), Positives = 57/131 (43%), Gaps = 9/131 (6%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKM 126
           R+  +  HS  H+M +A++ +        G +++ D   +DF    P + +E+A++E  +
Sbjct: 584 RANIMRNHSATHLMHKALRQVLGTHVQQKGSLVDADKTRFDFLHNAPMTDEEIAKVEAIV 643

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGP 186
              I  ++P         +ARE+     +     +L      + V +   G   +LC G 
Sbjct: 644 NAEILANAP--------TQAREMDIESAQKTGAMMLFGEKYGDIVRVLDIGSTTELCGGT 695

Query: 187 HVRSTGQVKKF 197
           HV  TG +  F
Sbjct: 696 HVNRTGDIGLF 706


>gi|294507878|ref|YP_003571936.1| seryl-tRNA synthetase [Salinibacter ruber M8]
 gi|294344206|emb|CBH24984.1| seryl-tRNA synthetase [Salinibacter ruber M8]
          Length = 428

 Score = 64.0 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 47/360 (13%), Positives = 101/360 (28%), Gaps = 42/360 (11%)

Query: 95  AIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            IG           D+ +  +  EL  ++ +  E +++    LK+    E+A  + E   
Sbjct: 22  GIGSPDLVDTLLKVDETRRSAITELQDVQSRQNE-LSQQIGALKREGKDEEAEAIIEKTG 80

Query: 155 EAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNR 214
                E +  +  +      RQ E       P++                      D + 
Sbjct: 81  --RMKEKINRLKEEVQEAEARQEELV--LELPNIPHPSVPVGA-------------DEDD 123

Query: 215 PMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWK 274
             +    G           +    +     D  + A+           SG  F+  KG +
Sbjct: 124 NEVEETIGEPPAFDFNPAPHWELADRHNLVDLERGAKVAG--------SGFPFYLGKGAR 175

Query: 275 IFQTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           + + L+++ + R  +  Y E+  P  ++    +               K A         
Sbjct: 176 LQRALLNFFLDRARERGYTEMQAPLFVNPESAK--------GTGQLPDKDALMYEIPRDD 227

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDD 390
           F   P             + +  +LP R   +   +R E       + GL R+  F + +
Sbjct: 228 FYPIPTAEVPVTNFHRDEILAADDLPRRYCTYSPCWRREAGSYGSDVRGLNRLHQFDKVE 287

Query: 391 AHVFCTKEQMFNECLKIHNLIISIYKDFGFEK----IMVKLSTRPEKRVGSDALWDDAEN 446
                  ++ +     +     S             +        + +V    +W  A+ 
Sbjct: 288 LVRIVPPDESYRALDALLEDAESALDALDLPYRRLLMCTGDMGFTQAKVYDLEVWSAAQE 347


>gi|270264045|ref|ZP_06192313.1| alanyl-tRNA synthetase [Serratia odorifera 4Rx13]
 gi|270042238|gb|EFA15334.1| alanyl-tRNA synthetase [Serratia odorifera 4Rx13]
          Length = 839

 Score = 64.0 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 58/139 (41%), Gaps = 10/139 (7%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGF-YYDFDKEQPFSSDELAQIEKKM 126
           R+   + HS  H++  A++    E     G ++ D +  +DF   +    +++  +E  +
Sbjct: 521 RNRIRLNHSATHLLHAALRQTLGEHVAQKGSLVNDKYLRFDFSHFEAMKPEQIRVVEDLV 580

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRG 185
            + + R+ P   + ++ + A+E         K          ++V +   G++  +LC G
Sbjct: 581 NQQVRRNLPVQTEVMALDDAKEKGAMALFGEKY--------DDSVRVLTMGDFSTELCGG 632

Query: 186 PHVRSTGQVKKFFKLMKVA 204
            H   TG +  F  L +  
Sbjct: 633 THASRTGDIGLFRILTESG 651


>gi|16077081|ref|NP_387894.1| seryl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168]
 gi|221307822|ref|ZP_03589669.1| seryl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168]
 gi|221312144|ref|ZP_03593949.1| seryl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. NCIB
           3610]
 gi|221317077|ref|ZP_03598371.1| seryl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           JH642]
 gi|221321340|ref|ZP_03602634.1| seryl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. SMY]
 gi|586064|sp|P37464|SYS_BACSU RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|467403|dbj|BAA05249.1| seryl-tRNA synthetase [Bacillus subtilis]
 gi|2632280|emb|CAB11789.1| seryl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168]
          Length = 425

 Score = 64.0 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 38/244 (15%), Positives = 88/244 (36%), Gaps = 22/244 (9%)

Query: 222 GTAWNTQQELTQYLYFLEE-SEKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIF 276
           G   +   E+ ++        E + H  +A E+ +          GS  +F+   G ++ 
Sbjct: 115 GETEDDNVEVRKWGEKPSFAYEPKPHWDIADELGILDFERAAKVTGSRFVFYKGLGARLE 174

Query: 277 QTLISYMRRKIKDDYE--EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           + L ++M     D+Y   E+  P ++++     +G    +  + F ++           +
Sbjct: 175 RALYNFMLDLHVDEYNYTEVIPPYMVNRASMTGTGQLPKFEEDAFKIR--------EEDY 226

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDA 391
            L P        +    + S   LP+  A F + +R+E   +     GL+R   F + + 
Sbjct: 227 FLIPTAEVPITNMHRDEILSGDSLPINYAAFSACFRSEAGSAGRDTRGLIRQHQFNKVEL 286

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENI 447
             F   E  + E  K+ N    + +       ++ + T              +W  +++ 
Sbjct: 287 VKFVKPEDSYEELEKLTNQAERVLQLLELPYRVMSMCTGDLGFTAAKKYDIEVWIPSQDT 346

Query: 448 MKGV 451
            + +
Sbjct: 347 YREI 350


>gi|306833055|ref|ZP_07466186.1| alanine--tRNA ligase [Streptococcus bovis ATCC 700338]
 gi|304424764|gb|EFM27899.1| alanine--tRNA ligase [Streptococcus bovis ATCC 700338]
          Length = 888

 Score = 64.0 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 39/188 (20%), Positives = 77/188 (40%), Gaps = 21/188 (11%)

Query: 23  GSDVAESISRSLAKKAVAVAI-------NGK---VCDLSDPVREGSIEIITPEDPRSLAV 72
           G  VA+       K  +   +       NG+     ++   +  G+   +  +  R   V
Sbjct: 520 GGQVADHGVIKNDKGDIVARVTDVQKAPNGQALHTVEVLASLSVGTTYTLEIDSKRRHRV 579

Query: 73  I-RHSCAHIMAEAVQSIWPEVQVAIGPIIEDGF-YYDFDKEQPFSSDELAQIEKKMQEII 130
           I  H+  H++  A+ ++  E     G + E+GF  +DF   +  +++EL QIE+++ + I
Sbjct: 580 IKNHTATHLLHAALHNVIGEHATQAGSLNEEGFLRFDFTHFEAVTAEELRQIEEEVNQQI 639

Query: 131 ARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVR 189
               P        + A+ +        K          +NV +   G++  +LC G HV 
Sbjct: 640 WNAIPVKTIETDIDTAKSMGAMALFGEKY--------GKNVRVVTIGDYSIELCGGTHVS 691

Query: 190 STGQVKKF 197
           +T ++  F
Sbjct: 692 NTAEIGIF 699


>gi|296112762|ref|YP_003626700.1| seryl-tRNA synthetase [Moraxella catarrhalis RH4]
 gi|295920456|gb|ADG60807.1| seryl-tRNA synthetase [Moraxella catarrhalis RH4]
          Length = 443

 Score = 64.0 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 66/188 (35%), Gaps = 16/188 (8%)

Query: 273 WKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            K+ + L+ +M      K  Y E+  P +++    Q +G    +  ++F +       + 
Sbjct: 191 AKLNRALVQFMLDTHTQKYGYTEMYVPYMVNSDSLQGTGQLPKFEEDLFKL-------RG 243

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFT 387
            + + L P +           + S ++LP++L      +R+E   +     GL+R   F 
Sbjct: 244 EKEYYLIPTSEVPLTNSVRDTILSPKDLPIKLTAHTPCFRSEAGSAGRDTRGLIRQHQFE 303

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       +        +      + +       ++ L T              +W  
Sbjct: 304 KVEMVQVTRADSSMQALEDMTAQAEYVLQALELPYRVMTLCTGDMGFSAVKTYDIEVWLP 363

Query: 444 AENIMKGV 451
           ++N+ + +
Sbjct: 364 SQNMYREI 371


>gi|255530089|ref|YP_003090461.1| histidyl-tRNA synthetase [Pedobacter heparinus DSM 2366]
 gi|255343073|gb|ACU02399.1| histidyl-tRNA synthetase [Pedobacter heparinus DSM 2366]
          Length = 462

 Score = 64.0 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 17/92 (18%), Positives = 41/92 (44%)

Query: 553 IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
            + +++     A EYA  +   L+S +++ E    +  +  ++     K IP +++ G  
Sbjct: 371 TKVLISNFDKEAEEYALPVLQQLRSANIAAELYPSSAKLKKQMSYADDKHIPYVMLIGSD 430

Query: 613 EASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           E     + ++   S   QK++    + +L K+
Sbjct: 431 EMESGMLTLKDMQSGQQQKLTAESIVELLKKD 462


>gi|209885385|ref|YP_002289242.1| seryl-tRNA synthetase [Oligotropha carboxidovorans OM5]
 gi|229890229|sp|B6JFP3|SYS_OLICO RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|209873581|gb|ACI93377.1| seryl-tRNA synthetase [Oligotropha carboxidovorans OM5]
          Length = 439

 Score = 64.0 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 35/240 (14%), Positives = 80/240 (33%), Gaps = 20/240 (8%)

Query: 211 DSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHR 270
           D +  +   +YG   +   +  +++   E     D  + A+      +            
Sbjct: 118 DEHGNVQHHVYGEPRSYAFKPKEHVALGEGLGFMDFERAAKLSGARFVVLKSGL------ 171

Query: 271 KGWKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTI 328
              ++ + +  +       +  Y E+N P ++       +     +R + FA    D   
Sbjct: 172 --ARLERAIGQFFLDVHTGEHGYTEVNPPLLVRDDAMFGTAQLPKFREDQFAAGSLD--- 226

Query: 329 KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRG 385
            + + + L P        +    +   +ELP+RL      +R E   +     G++R   
Sbjct: 227 AEGQGYWLIPTAEVPLTNLVRESILDEKELPMRLTALTPCFRAEAGAAGRDTRGMIRQHQ 286

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALW 441
           FT+ +     T ++  NE  ++ +    + K  G    ++ L T              +W
Sbjct: 287 FTKVELVSITTPDESRNEHERMLSCAEEVLKRLGLHYRVMTLCTGDMGFASQKTYDIEVW 346


>gi|168186831|ref|ZP_02621466.1| alanyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
 gi|169295233|gb|EDS77366.1| alanyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
          Length = 879

 Score = 64.0 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 33/169 (19%), Positives = 66/169 (39%), Gaps = 15/169 (8%)

Query: 43  INGKVCDLSDPVR-----EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIG 97
           I GK+    + +      E  + +      R      HS  H++  A++ +  E     G
Sbjct: 529 IGGKIVHFVEVIEGNIKLEDEVLLEVDRRRRENVGKNHSATHLLHAALRKVIGEHVHQSG 588

Query: 98  P-IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEA 156
             + ED   +DF   +  + +EL ++E  +   I      + + +S E+AR         
Sbjct: 589 SYVDEDKLRFDFTHFESLTDEELKEVEDLVNNTIENVYDVVTKEMSIEEAR--------N 640

Query: 157 YKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKFFKLMKVA 204
                L      + V + + GE+  +LC G H+ + G++  F  + +  
Sbjct: 641 SGAMALFDEKYGDRVRVVKMGEFSTELCGGTHISNVGKIGLFKIVSESG 689


>gi|326335021|ref|ZP_08201221.1| serine--tRNA ligase [Capnocytophaga sp. oral taxon 338 str. F0234]
 gi|325692826|gb|EGD34765.1| serine--tRNA ligase [Capnocytophaga sp. oral taxon 338 str. F0234]
          Length = 423

 Score = 64.0 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 68/192 (35%), Gaps = 16/192 (8%)

Query: 245 DHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQV 299
            H +LA++ ++          G+G   +  KG K+ + LISY + +     Y+E   P +
Sbjct: 142 PHWELAKKYNIIDFELGVKLTGAGFPVYKGKGAKLQRALISYFLDKNTSAGYQEYQVPHM 201

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           +++           Y       K        L    L P        +F   L S  +LP
Sbjct: 202 VNE--------ASGYGTGQLPDKEGQMYHVQLDNLYLIPTAEVPVTNIFRDTLLSENDLP 253

Query: 360 VRLAEFGSVYRNEPSG---SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +    +   +R E       + GL R+  F + +       ++ +    ++   +  I  
Sbjct: 254 ICCTAYTPCFRREAGSYGAHVRGLNRLHQFDKVEIVRIEHPDRSYQALDQMIEHVKGILN 313

Query: 417 DFGFEKIMVKLS 428
           +      +++L 
Sbjct: 314 ELKLPYRILRLC 325


>gi|326563744|gb|EGE13995.1| seryl-tRNA synthetase [Moraxella catarrhalis 46P47B1]
 gi|326566764|gb|EGE16903.1| seryl-tRNA synthetase [Moraxella catarrhalis 103P14B1]
 gi|326567394|gb|EGE17509.1| seryl-tRNA synthetase [Moraxella catarrhalis BC1]
 gi|326569919|gb|EGE19969.1| seryl-tRNA synthetase [Moraxella catarrhalis BC8]
 gi|326571480|gb|EGE21495.1| seryl-tRNA synthetase [Moraxella catarrhalis BC7]
 gi|326575237|gb|EGE25165.1| seryl-tRNA synthetase [Moraxella catarrhalis CO72]
 gi|326576676|gb|EGE26583.1| seryl-tRNA synthetase [Moraxella catarrhalis 101P30B1]
          Length = 422

 Score = 64.0 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 66/188 (35%), Gaps = 16/188 (8%)

Query: 273 WKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            K+ + L+ +M      K  Y E+  P +++    Q +G    +  ++F +       + 
Sbjct: 170 AKLNRALVQFMLDTHTQKYGYTEMYVPYMVNSDSLQGTGQLPKFEEDLFKL-------RG 222

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFT 387
            + + L P +           + S ++LP++L      +R+E   +     GL+R   F 
Sbjct: 223 EKEYYLIPTSEVPLTNSVRDTILSPKDLPIKLTAHTPCFRSEAGSAGRDTRGLIRQHQFE 282

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       +        +      + +       ++ L T              +W  
Sbjct: 283 KVEMVQVTRADSSMQALEDMTAQAEYVLQALELPYRVMTLCTGDMGFSAVKTYDIEVWLP 342

Query: 444 AENIMKGV 451
           ++N+ + +
Sbjct: 343 SQNMYREI 350


>gi|209884575|ref|YP_002288432.1| alanyl-tRNA synthetase [Oligotropha carboxidovorans OM5]
 gi|209872771|gb|ACI92567.1| alanyl-tRNA synthetase [Oligotropha carboxidovorans OM5]
          Length = 909

 Score = 64.0 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 28/137 (20%), Positives = 57/137 (41%), Gaps = 1/137 (0%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFS 115
            ++++      R      HS  H++ EA++ +  +     G ++      +DF   +P +
Sbjct: 568 AALQLEVDHTRRGAIRANHSATHLLHEALRQVLGDHIAQRGSLVSPERLRFDFAHTKPIA 627

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           +DEL +IE    +I+ ++S    + +  + AR          K      + +    +   
Sbjct: 628 ADELRRIEDIANDIVLQNSEVTTRLMGLDDARSSGARALFGEKYGDEVRVVSMGQTSGNA 687

Query: 176 QGEWFDLCRGPHVRSTG 192
            G   +LC G HV+ TG
Sbjct: 688 LGWSVELCGGTHVKRTG 704


>gi|329961902|ref|ZP_08299915.1| alanine--tRNA ligase [Bacteroides fluxus YIT 12057]
 gi|328531125|gb|EGF57975.1| alanine--tRNA ligase [Bacteroides fluxus YIT 12057]
          Length = 873

 Score = 64.0 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 30/144 (20%), Positives = 59/144 (40%), Gaps = 10/144 (6%)

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDELAQ 121
              D R+     HSC H++  A++ +  +     G  +  D   +DF   Q  + +E+ Q
Sbjct: 551 VDTDKRAACAANHSCTHLLDAALREVLGDHVEQKGSLVTPDSLRFDFSHFQKVTDEEIRQ 610

Query: 122 IEKKMQEIIARDSPF-LKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +E  +   I  + P    + +  E+A+EL        K          ++V + + G   
Sbjct: 611 VEHIVNAKIRANIPLKEYRNIPIEEAKELGAIALFGEKY--------GDHVRVIQFGSSI 662

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVA 204
           + C G HV +TG +     + + +
Sbjct: 663 EFCGGTHVAATGNIGMVKIVSESS 686


>gi|326577649|gb|EGE27526.1| seryl-tRNA synthetase [Moraxella catarrhalis O35E]
          Length = 422

 Score = 64.0 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 66/188 (35%), Gaps = 16/188 (8%)

Query: 273 WKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            K+ + L+ +M      K  Y E+  P +++    Q +G    +  ++F +       + 
Sbjct: 170 AKLNRALVQFMLDTHTQKYGYTEMYVPYMVNSDSLQGTGQLPKFEEDLFKL-------RG 222

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFT 387
            + + L P +           + S R+LP++L      +R+E   +     GL+R   F 
Sbjct: 223 EKEYYLIPTSEVPLTNSVRDTILSPRDLPIKLTAHTPCFRSEAGSAGRDTRGLIRQHQFE 282

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       +        +      + +       ++ L T              +W  
Sbjct: 283 KVEMVQVTRADSSMQALEDMTAQAEYVLQALELPYRVMTLCTGDMGFSAVKTYDIEVWLP 342

Query: 444 AENIMKGV 451
           ++N+ + +
Sbjct: 343 SQNMYREI 350


>gi|332654808|ref|ZP_08420550.1| histidine--tRNA ligase [Ruminococcaceae bacterium D16]
 gi|332516151|gb|EGJ45759.1| histidine--tRNA ligase [Ruminococcaceae bacterium D16]
          Length = 455

 Score = 64.0 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 31/213 (14%), Positives = 72/213 (33%), Gaps = 17/213 (7%)

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDR----INTGVLLGEGAFYGPKFEYILKDAIGR 489
             G + ++D   + +  V+  +      +    ++  +  G   + G  +E  + D    
Sbjct: 239 YRGRNEIFDQGLDELNTVVKYLAAFGVPQTHFAVDLTIARGLDYYTGTVYETTMLDHP-- 296

Query: 490 DWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW 549
             + G+I        R++        ++   V I   +     R   ++ +    N  L 
Sbjct: 297 --EIGSICSGG----RYDNLAEYYTDKQLPGVGISIGL----TRLFFVLEDQGYLNDALN 346

Query: 550 LSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIIC 609
            +P   ++  +T      A  +A  L+   +  +     +    KI       IP  +  
Sbjct: 347 TAPADVLILPMTDDLSP-AIALATTLRQAGIRTQIHAEQKKFKQKISYADKLSIPYAVFL 405

Query: 610 GDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           G+ E S     ++   S    K+S  +A+  + 
Sbjct: 406 GEDEISSGVCAVKDLQSGEQVKLSPAEAVSHIQ 438


>gi|261253432|ref|ZP_05946005.1| seryl-tRNA synthetase [Vibrio orientalis CIP 102891]
 gi|260936823|gb|EEX92812.1| seryl-tRNA synthetase [Vibrio orientalis CIP 102891]
          Length = 435

 Score = 64.0 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 24/190 (12%), Positives = 64/190 (33%), Gaps = 11/190 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + +  +M     +   Y E+  P +++      +G    +  ++F  +  ++ + D
Sbjct: 172 ARLHRAIAQFMLDLHTEEHGYSEMYVPYLVNSDSLFGTGQLPKFGKDLFHTEPLEEKVND 231

Query: 331 L--RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRG 385
              R  +L P        +    +    +LP+++      +R+E         GL+R+  
Sbjct: 232 EEPRKLSLIPTAEVPVTNMVRDTISDEADLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQ 291

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALW 441
           F + +       E   +   ++      + +        V L T              +W
Sbjct: 292 FDKVELVQITRPEDSMDALEELTGHAEKVLQLLELPYRKVVLCTGDMGFGARKTYDLEVW 351

Query: 442 DDAENIMKGV 451
             A+   + +
Sbjct: 352 VPAQETYREI 361


>gi|258404449|ref|YP_003197191.1| alanyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
 gi|257796676|gb|ACV67613.1| alanyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
          Length = 880

 Score = 64.0 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 32/144 (22%), Positives = 59/144 (40%), Gaps = 8/144 (5%)

Query: 56  EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPF 114
           +   E+I  E  R      H+  H++  A++ +  E     G  +  D   +D    Q  
Sbjct: 551 DDEAELIVDEGERVATARNHTVTHLLHAALREVLGEHVKQAGSLVASDRLRFDLTHIQAL 610

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
           +++E+  +E K+ + I  D+P    ++ + +A +         K E        E   + 
Sbjct: 611 TAEEIQAVEDKVNQSILADTPVESAHMDYSQAVQGGAVALFGEKYE-------DEVRVID 663

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFF 198
             G   +LC G H+R+TGQ   F 
Sbjct: 664 IPGVSRELCGGTHLRATGQAGFFC 687


>gi|227501341|ref|ZP_03931390.1| histidine--tRNA ligase [Anaerococcus tetradius ATCC 35098]
 gi|227216475|gb|EEI81884.1| histidine--tRNA ligase [Anaerococcus tetradius ATCC 35098]
          Length = 428

 Score = 64.0 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 57/427 (13%), Positives = 126/427 (29%), Gaps = 72/427 (16%)

Query: 269 HRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
             K   +F  + + +    K   +  I+TP +    +    G            K   + 
Sbjct: 16  LPKEQLVFDKIKNIIEESYKKYQFMPIDTPVIEKNEILFAKG-----GGETE--KQIYEI 68

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYREL--PVRLAEFGSVYRNEPSGSLHGLMRVRG 385
             + +  +L+       V +  +  + +++L  P +      VYR    G  +   R R 
Sbjct: 69  ASESKDMSLRF---DLTVPLARYVAEHFQDLNFPFKRYHIAKVYR----GERNQKGRYRE 121

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP-------------- 431
           F Q D  +             +  +I  I+    F  +  K++ R               
Sbjct: 122 FYQCDIDIIGHNSLSIYNDALLPRVIYDIFDKLNFSDLTFKINNRKLLNGFFKSLGIEDS 181

Query: 432 ---------EKRVGSDALWDD------------------AENIMKGVLDTIKNSSQDRIN 464
                    + ++G D  +++                       + +L+ + + S + + 
Sbjct: 182 TDVLRTIDKKDKIGLDNTYEELVKLTNEEKAHTIINFINNTASNQTLLEKLSDFSDNELF 241

Query: 465 TGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIH 524
              L      Y    +  + D   +     T  +D+   + +  F               
Sbjct: 242 LEGLDELSKVYKYMIDLDIPDKNIKIDLAITRGLDYYTSTVYETFINGYEKIGSVCSGGR 301

Query: 525 RAVFGSI---ERFIGI-----MIENFKGNLPLWLSPIQA------IVTTITSSAVEYAQE 570
                S    ++  G+     +   F     L L   Q       ++  +   A EY  E
Sbjct: 302 YEDLASNFSKQKLPGVGMSIGLTRLFYQFQELGLIDDQIESLTDSLIIPMDEEANEYGIE 361

Query: 571 IANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
           +   L+S   +++    +     K+       +  +II G  E + + + I+   +    
Sbjct: 362 VLKKLRSRGEAVDIYLEDGKFKKKMTYADKLGVKEVIILGADELANKEVSIKNMQTGEQI 421

Query: 631 KVSLLDA 637
           K S  D 
Sbjct: 422 KKSFADL 428


>gi|224025892|ref|ZP_03644258.1| hypothetical protein BACCOPRO_02638 [Bacteroides coprophilus DSM
           18228]
 gi|224019128|gb|EEF77126.1| hypothetical protein BACCOPRO_02638 [Bacteroides coprophilus DSM
           18228]
          Length = 872

 Score = 64.0 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 33/144 (22%), Positives = 59/144 (40%), Gaps = 10/144 (6%)

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDELAQ 121
              D R+     HSC H++ EA++ +        G  +  D   +DF   Q  + ++L +
Sbjct: 551 VDTDKRAACAANHSCTHLLDEALRQVLGTHVEQKGSLVTPDSLRFDFSHFQKVTPEQLRE 610

Query: 122 IEKKMQEIIARDSPF-LKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +E  +   I  + P    + L  EKAREL        K          + V + + G   
Sbjct: 611 VEHLVNAKIRENIPLTEYRNLPIEKARELGAIALFGEKY--------GDEVRVVQFGSSI 662

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVA 204
           + C G HV +TG++     + + +
Sbjct: 663 EFCGGTHVSATGKIGMVKIISESS 686


>gi|126179531|ref|YP_001047496.1| histidyl-tRNA synthetase [Methanoculleus marisnigri JR1]
 gi|166228583|sp|A3CVW4|SYH_METMJ RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|125862325|gb|ABN57514.1| histidyl-tRNA synthetase [Methanoculleus marisnigri JR1]
          Length = 410

 Score = 64.0 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 15/94 (15%), Positives = 34/94 (36%), Gaps = 1/94 (1%)

Query: 550 LSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIIC 609
           L+    +    T      A E+A   +   +  E D     +  ++   +        + 
Sbjct: 314 LAHEPVVGVVCTPEGRARALEVARAFREAGVRAEADLMQRGMGAQVSHAAKT-ADFAAVL 372

Query: 610 GDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           G +E    ++ ++   S   Q+ SL +AI  + +
Sbjct: 373 GKREVEAGTVTLKNLHSGEQQERSLEEAIAEVAR 406


>gi|300811782|ref|ZP_07092255.1| serine--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
 gi|300497281|gb|EFK32330.1| serine--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
 gi|325685463|gb|EGD27561.1| serine--tRNA ligase [Lactobacillus delbrueckii subsp. lactis DSM
           20072]
          Length = 435

 Score = 64.0 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 72/188 (38%), Gaps = 9/188 (4%)

Query: 272 GWKIFQTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G  + + + ++ +     + Y E+ TP +++    Q +G +  +  +++ +   DD  + 
Sbjct: 170 GALLERAVYNFFLDENTSEGYTEVITPSLVNNDSMQGTGQFPKFTEDVYTIVDNDD-PEV 228

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFT 387
            R   L P      V  F   +   + LP+ +      +R+E   +     GL+R+  F 
Sbjct: 229 ARNLTLIPTAEVPLVNYFRGDIIDGKNLPINVTALSPAFRSEAGSAGRDTRGLIRMHEFR 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E  + E   + +    + +  G    +V LST              +W  
Sbjct: 289 KVEMVKVVKPEDSWKELENLTHNAEHLLQKLGLPYRVVALSTGDASFTSAKTYDLEVWMP 348

Query: 444 AENIMKGV 451
           A++  + +
Sbjct: 349 AQDTYREI 356


>gi|294673444|ref|YP_003574060.1| serine--tRNA ligase [Prevotella ruminicola 23]
 gi|294473781|gb|ADE83170.1| serine--tRNA ligase [Prevotella ruminicola 23]
          Length = 439

 Score = 64.0 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 68/195 (34%), Gaps = 16/195 (8%)

Query: 238 LEESEKRDHRKLAREMDLFHIA----EDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYE 292
           L  +    H +LA++ +L          G+G   +  KG ++ + LI++ +    K  Y 
Sbjct: 150 LGIANPLPHWELAKKYNLIDFDLGVKITGAGFPVYIGKGARLQRALINFFLDEARKSGYT 209

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           EI  P V++            Y       K       ++  F L P        ++   +
Sbjct: 210 EIMPPTVVNA--------ASGYGTGQLPDKEGQMYHCEVDDFYLIPTAEVPVTNIYRDVI 261

Query: 353 KSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
              ++LP++   +   +R E       + GL R+  F++ +       E       ++  
Sbjct: 262 LDEKDLPIKNCAYTECFRREAGSYGKDVRGLNRLHEFSKIEIVRIDKPEHSKESHKEMLE 321

Query: 410 LIISIYKDFGFEKIM 424
            +  + K       +
Sbjct: 322 HVEGLLKKLELPYRI 336


>gi|291482383|dbj|BAI83458.1| seryl-tRNA synthetase [Bacillus subtilis subsp. natto BEST195]
          Length = 444

 Score = 64.0 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 38/244 (15%), Positives = 88/244 (36%), Gaps = 22/244 (9%)

Query: 222 GTAWNTQQELTQYLYFLEE-SEKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIF 276
           G   +   E+ ++        E + H  +A E+ +          GS  +F+   G ++ 
Sbjct: 134 GETEDDNVEVRKWGEKPSFAYEPKPHWDIADELGILDFERAAKVTGSRFVFYKGLGARLE 193

Query: 277 QTLISYMRRKIKDDYE--EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           + L ++M     D+Y   E+  P ++++     +G    +  + F ++           +
Sbjct: 194 RALYNFMLDLHVDEYNYTEVIPPYMVNRASMTGTGQLPKFEEDAFKIR--------EEDY 245

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDA 391
            L P        +    + S   LP+  A F + +R+E   +     GL+R   F + + 
Sbjct: 246 FLIPTAEVPITNMHRDEILSGDSLPINYAAFSACFRSEAGSAGRDTRGLIRQHQFNKVEL 305

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENI 447
             F   E  + E  K+ N    + +       ++ + T              +W  +++ 
Sbjct: 306 VKFVKPEDSYEELEKLTNQAERVLQLLELPYRVMSMCTGDLGFTAAKKYDIEVWIPSQDT 365

Query: 448 MKGV 451
            + +
Sbjct: 366 YREI 369


>gi|186475408|ref|YP_001856878.1| seryl-tRNA synthetase [Burkholderia phymatum STM815]
 gi|238691271|sp|B2JEF5|SYS_BURP8 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|184191867|gb|ACC69832.1| seryl-tRNA synthetase [Burkholderia phymatum STM815]
          Length = 432

 Score = 64.0 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 76/222 (34%), Gaps = 14/222 (6%)

Query: 242 EKRDHRKLAREMDL-FHIAEDGSGVIFWHRKG--WKIFQTLISYMRRKI--KDDYEEINT 296
           E +DH  +   + L F      SG  F   +G   ++ + L  +M      +  Y E+ T
Sbjct: 135 EIKDHVDVGTPLGLDFETGAKLSGARFTLLRGQIARLHRALAQFMIDTHTQQHGYTEVYT 194

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +++  +   +G    +  +MF V+         +       +           +    
Sbjct: 195 PYIVNPEILFGTGQLPKFADDMFRVEKGGGENTVTQYLIS--TSEISLTNTVRDSIVDSN 252

Query: 357 ELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           ELP++L      +R+E         G++R   F + +     + +  ++   ++      
Sbjct: 253 ELPIKLTAHSPCFRSEAGSYGRDTRGMIRQHQFDKVEMVQIVSPDTSYDALEQMVAHAEV 312

Query: 414 IYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
           I +       ++ L T              +W  A+N  + +
Sbjct: 313 ILQKLELPYRVITLCTGDMGFSAAKTYDLEVWVPAQNTYREI 354


>gi|104774578|ref|YP_619558.1| seryl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC 11842]
 gi|116514698|ref|YP_813604.1| seryl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC BAA-365]
 gi|122274570|sp|Q048F6|SYS_LACDB RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|123077195|sp|Q1G8N2|SYS_LACDA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|103423659|emb|CAI98620.1| Seryl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC 11842]
 gi|116094013|gb|ABJ59166.1| seryl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC BAA-365]
 gi|325126383|gb|ADY85713.1| Seryl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           2038]
          Length = 435

 Score = 64.0 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 72/188 (38%), Gaps = 9/188 (4%)

Query: 272 GWKIFQTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G  + + + ++ +     + Y E+ TP +++    Q +G +  +  +++ +   DD  + 
Sbjct: 170 GALLERAVYNFFLDENTSEGYTEVITPSLVNNDSMQGTGQFPKFTEDVYTIVDNDD-PEV 228

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFT 387
            R   L P      V  F   +   + LP+ +      +R+E   +     GL+R+  F 
Sbjct: 229 ARNLTLIPTAEVPLVNYFRGDIIDGKNLPINVTALSPAFRSEAGSAGRDTRGLIRMHEFR 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E  + E   + +    + +  G    +V LST              +W  
Sbjct: 289 KVEMVKVVKPEDSWKELENLTHNAEHLLQKLGLPYRVVALSTGDASFTSAKTYDLEVWMP 348

Query: 444 AENIMKGV 451
           A++  + +
Sbjct: 349 AQDTYREI 356


>gi|325286672|ref|YP_004262462.1| seryl-tRNA synthetase [Cellulophaga lytica DSM 7489]
 gi|324322126|gb|ADY29591.1| seryl-tRNA synthetase [Cellulophaga lytica DSM 7489]
          Length = 423

 Score = 64.0 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 70/192 (36%), Gaps = 16/192 (8%)

Query: 245 DHRKLAREMDLFHIA----EDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQV 299
            H +LA++ D+          G+G   +  KG ++ + LI+Y + +     Y+EI  P +
Sbjct: 142 PHWELAKKYDIIDFELGVKIAGAGFPVYKGKGARLQRALIAYFLDKNTAAGYQEIQVPHL 201

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           ++    + SG    Y       K             L P        +F + + + ++ P
Sbjct: 202 VN----ETSG----YGTGQLPDKEGQMYHVTADDLYLIPTAEVPVTNIFRNTIVNQKDFP 253

Query: 360 VRLAEFGSVYRNEPSG---SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +    +   +R E       + GL R+  F + +       +  +     +   I  I +
Sbjct: 254 ITYTGYTPCFRREAGSYGAHVRGLNRLHQFDKVELVRVEHPDNSYAALDGMVEHIKDILR 313

Query: 417 DFGFEKIMVKLS 428
           +      +++L 
Sbjct: 314 ELKLPYRLLRLC 325


>gi|307825703|ref|ZP_07655920.1| alanyl-tRNA synthetase [Methylobacter tundripaludum SV96]
 gi|307733280|gb|EFO04140.1| alanyl-tRNA synthetase [Methylobacter tundripaludum SV96]
          Length = 870

 Score = 64.0 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 31/161 (19%), Positives = 67/161 (41%), Gaps = 21/161 (13%)

Query: 44  NGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG 103
           NG++CD      +           R+   + HS  H++  A++ +  +     G ++   
Sbjct: 537 NGQLCDARVSAAD-----------RTATELNHSATHLLHAALRQVLGDHVAQKGSLVNPE 585

Query: 104 -FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL 162
              +DF   +P ++ E++ +E+ + E I  ++P   Q ++ + A +         K    
Sbjct: 586 RLRFDFSHFEPVTASEISTVERIVNEQIRANNPVSAQVMAKDDAVKAGAMALFGEKY--- 642

Query: 163 ESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKFFKLMK 202
                 + V + + GE+  +LC G HV   G +  F  + +
Sbjct: 643 -----GDEVRVLKIGEFSTELCGGTHVERAGDIGCFKIINE 678


>gi|189462888|ref|ZP_03011673.1| hypothetical protein BACCOP_03588 [Bacteroides coprocola DSM 17136]
 gi|189430504|gb|EDU99488.1| hypothetical protein BACCOP_03588 [Bacteroides coprocola DSM 17136]
          Length = 453

 Score = 64.0 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 11/90 (12%), Positives = 34/90 (37%)

Query: 553 IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
            Q +      +   Y   +   +++  +  E    +  +  ++   + K IP + I G+ 
Sbjct: 364 TQLLFVNFGEAEAAYVLPVLAKVRAAGIRAEIYPDSAKMKKQMSYANAKAIPFVAIVGEN 423

Query: 613 EASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           E +E  + ++   +     ++  + I  + 
Sbjct: 424 EMNEGKVMLKNMATGEQNLLAPEELIAAIR 453


>gi|313897403|ref|ZP_07830946.1| histidine--tRNA ligase [Clostridium sp. HGF2]
 gi|312957773|gb|EFR39398.1| histidine--tRNA ligase [Clostridium sp. HGF2]
          Length = 445

 Score = 64.0 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 67/428 (15%), Positives = 141/428 (32%), Gaps = 65/428 (15%)

Query: 269 HRKGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSY-RANMFAVKCADD 326
                  +  L   +R+     +Y+EI TP     +++++           M+  +  + 
Sbjct: 13  LPNEISKWHRLEELIRQFTYVYNYQEIRTPIFEHTNVFKRGNDSSDMVNKEMYTFQLENS 72

Query: 327 TIKDLRTFALKPMNCPGHVAVF-NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRG 385
           +        L+P    G    F  H +  Y +LP+++   G   R+E         R+R 
Sbjct: 73  STS----LTLRPEGTAGVARAFVEHKMYGYADLPMKMYYVGPQCRHERPQK----GRMRI 124

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI---MVKLSTRPEKRVGSDALWD 442
           F Q    V   K  + +   +   L  S     G + +   +  L     +    +AL +
Sbjct: 125 FNQFGVEVIGAKSPLLDV--ETIALGWSFISALGLKDMKVLINTLGDDASRAAYREALKE 182

Query: 443 DAENIMKGVLDTIKNSSQ-------------------------DRINTG-------VLLG 470
             +N +  +    K   +                         D +N         VL G
Sbjct: 183 HFKNDIDHMCTDCKRRYEQNPLRILDCKIDHDLDIMKQVPKMADYLNEESKAYFEQVLEG 242

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
             A   P +E   K   G D+   T+    ++     A        +   ++ +   FG 
Sbjct: 243 LDALGIP-YEVDDKLVRGLDYYTHTVFEVVSVNKEMGAQSTVFAGGRYDGLVEY---FGG 298

Query: 531 IERFIGI---------MIENFKGNLPLWLS-PIQAIVTTITSSAVEYAQEIANLLKSHHL 580
            E   GI         +I      + L     +   V  ++  A     ++   L++   
Sbjct: 299 PEGMSGIGWAMGLERLLIALEAEGISLVDEDSLDVYVLCLSPKASTTVLQVVTQLRAAGY 358

Query: 581 SIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV---SLLDA 637
             +TD+ N ++  + +        + I+ G+++    S  ++   +    +V   S+++A
Sbjct: 359 RTDTDYLNRSMKAQFKTVDRMHAKVAIMIGEQDLESGSAAVKNIETKEKTEVAFDSIVEA 418

Query: 638 IPILTKES 645
           I  +  E+
Sbjct: 419 IDAMFGEA 426


>gi|332759807|gb|EGJ90110.1| seryl-tRNA synthetase [Shigella flexneri 4343-70]
          Length = 430

 Score = 64.0 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 64/188 (34%), Gaps = 10/188 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M     +   Y E   P +++Q     +G    +  ++F  +  ++   D
Sbjct: 170 ARMHRALSQFMLDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLFHTRPLEEEA-D 228

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
              +AL P        +    +    +LP+++      +R+E         GL+R+  F 
Sbjct: 229 TSNYALIPTAEVPLTNLVRGEIIDEDDLPIKMIAHTPCFRSEAGSYGRDTRGLIRMHQFD 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E       ++      + +  G     + L T              +W  
Sbjct: 289 KVEMVQIVRPEDSMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMGFGACKTYDLEVWIP 348

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 349 AQNTYREI 356


>gi|313124469|ref|YP_004034728.1| seryl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           ND02]
 gi|312281032|gb|ADQ61751.1| Seryl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           ND02]
          Length = 435

 Score = 64.0 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 72/188 (38%), Gaps = 9/188 (4%)

Query: 272 GWKIFQTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G  + + + ++ +     + Y E+ TP +++    Q +G +  +  +++ +   DD  + 
Sbjct: 170 GALLERAVYNFFLDENTSEGYTEVITPSLVNNDSMQGTGQFPKFTEDVYTIVDNDD-PEV 228

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFT 387
            R   L P      V  F   +   + LP+ +      +R+E   +     GL+R+  F 
Sbjct: 229 ARNLTLIPTAEVPLVNYFRGDIIDGKNLPINVTALSPAFRSEAGSAGRDTRGLIRMHEFR 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E  + E   + +    + +  G    +V LST              +W  
Sbjct: 289 KVEMVKVVKPEDSWKELENLTHNAEHLLQKLGLPYRVVALSTGDASFTSAKTYDLEVWMP 348

Query: 444 AENIMKGV 451
           A++  + +
Sbjct: 349 AQDTYREI 356


>gi|283784715|ref|YP_003364580.1| seryl-tRNA synthetase [Citrobacter rodentium ICC168]
 gi|282948169|emb|CBG87736.1| seryl-tRNA synthetase [Citrobacter rodentium ICC168]
          Length = 430

 Score = 64.0 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 62/188 (32%), Gaps = 10/188 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M     +   Y E   P +++      +G    +  ++F  +  ++   D
Sbjct: 170 ARMHRALSQFMLDLHTEQHGYSENYVPYLVNHDTLYGTGQLPKFAGDLFHTRPLEEEA-D 228

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
              +AL P        +    +     LP+++      +R+E         GL+R+  F 
Sbjct: 229 SSNYALIPTAEVPLTNLVRDEIIDEDLLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFD 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E       ++      + +  G     + L T              +W  
Sbjct: 289 KVEMVQIVRPEDSMAALEEMTGHAEKVLQLLGLPYRKIVLCTGDMGFGACKTYDLEVWIP 348

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 349 AQNTYREI 356


>gi|288940831|ref|YP_003443071.1| alanyl-tRNA synthetase [Allochromatium vinosum DSM 180]
 gi|288896203|gb|ADC62039.1| alanyl-tRNA synthetase [Allochromatium vinosum DSM 180]
          Length = 867

 Score = 64.0 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 63/157 (40%), Gaps = 17/157 (10%)

Query: 44  NGKVCDLSDPVREGSIEIIT------PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIG 97
           +G +  +   V EG++ +          D R    + HS  H++  A++ +        G
Sbjct: 519 DGVLVHVGR-VEEGALTVGDRVDARVDADRRRATALNHSATHLLHAALREVLGPHVQQKG 577

Query: 98  PIIEDG-FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEA 156
            ++      +DF   +P S ++L  IE+ +   +  +     + +S E A+         
Sbjct: 578 SLVGPERLRFDFSHFEPVSREQLLTIERMVNREVRANHLVETRIMSLEDAKASGAMALFG 637

Query: 157 YKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTG 192
            K          + V + R GE+  +LC G HV++ G
Sbjct: 638 EKY--------ADQVRVLRMGEFSTELCGGTHVKAVG 666


>gi|253998905|ref|YP_003050968.1| seryl-tRNA synthetase [Methylovorus sp. SIP3-4]
 gi|253985584|gb|ACT50441.1| seryl-tRNA synthetase [Methylovorus sp. SIP3-4]
          Length = 429

 Score = 64.0 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 77/220 (35%), Gaps = 13/220 (5%)

Query: 244 RDHRKLAREMDL-FHIAEDGSGVIFWHRKG--WKIFQTLISYMRRKIKD--DYEEINTPQ 298
           +DH  +   + L F      +G  F   +G   ++ + L  +M     +   Y E  TP 
Sbjct: 137 KDHTDVGTPLGLDFDTGAKLAGARFTLMRGQIARLHRALAQFMLDTQTERHGYTECYTPY 196

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           +++    + +G    + A++FA +       +     L P +           + +   L
Sbjct: 197 IVNADSLRGTGQLPKFEADLFAAQKGGQE-GEGEALYLIPTSEVTLTNTVRDEILAAESL 255

Query: 359 PVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           P++L      +R+E         G++R   F + +       E+ +    ++      I 
Sbjct: 256 PIKLTAHTPCFRSEAGSYGRDTRGMIRQHQFDKVEMVQIVHPEKSYEALEEMVGHAEYIL 315

Query: 416 KDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
           +  G    +V L T              +W  A+N  + +
Sbjct: 316 QALGLPYRVVSLCTGDMGFGAAKTYDLEVWLPAQNTYREI 355


>gi|239637294|ref|ZP_04678281.1| seryl-tRNA synthetase [Staphylococcus warneri L37603]
 gi|239597131|gb|EEQ79641.1| seryl-tRNA synthetase [Staphylococcus warneri L37603]
          Length = 428

 Score = 64.0 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 46/343 (13%), Positives = 111/343 (32%), Gaps = 44/343 (12%)

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           +++ E+   +         ++  + E A ++    ++     + + I   +        +
Sbjct: 42  ISKTEEMKAKRNKVSEEIAQKKRNKENADDVIAEMRQ-----LGDDIKEYDTQLNEIDNK 96

Query: 179 WFDL-CRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
             D+ CR P++ +    +       +    W             GT      E   +   
Sbjct: 97  MTDILCRIPNLINDDVPQGASDEENIEVKKW-------------GTPREFDFEAKAHWDI 143

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI--KDDYEEIN 295
           +E+ +  D  + A+      +             G ++ + L++YM  K   +  Y E+ 
Sbjct: 144 VEDLKMADFDRAAKISGARFVYLTR--------DGAQLERALMNYMITKHTTQHGYTEMM 195

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
            PQ+++      +G    +  ++F V        +       P         +   +   
Sbjct: 196 VPQLVNADTMYGTGQLPKFEEDLFKV--------EKEGLYTIPTAEVPLTNFYRDEIIQP 247

Query: 356 RELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
             LP +     + +R+E   +     GL+R+  F + +   F   E  ++   ++     
Sbjct: 248 GVLPEKFTGQSACFRSEAGSAGRDTRGLIRLHQFDKVEMVRFEKPEDSWDALEEMTTNAE 307

Query: 413 SIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
           +I ++ G     V L T              +W  + N  K +
Sbjct: 308 AILEELGLPYRRVILCTGDIGFSASKTYDLEVWLPSYNDYKEI 350


>gi|16800607|ref|NP_470875.1| alanyl-tRNA synthetase [Listeria innocua Clip11262]
 gi|20532255|sp|Q92BK9|SYA_LISIN RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|16414012|emb|CAC96770.1| alanyl-tRNA synthetase [Listeria innocua Clip11262]
          Length = 879

 Score = 64.0 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 37/209 (17%), Positives = 80/209 (38%), Gaps = 11/209 (5%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFS 115
            ++++   +  R   +  H+  H++  A++    E     G ++  D   +DF      +
Sbjct: 548 DTVKLAVDKVKRRETIKNHTATHLLHRALKDTLGEHVNQAGSLVSPDRLRFDFSHFGQIT 607

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            +EL ++E+ + E I      + + +   +A+EL        K          E V + +
Sbjct: 608 EEELTKMEEIVNEKIWEQINVIIEEMPIAEAKELGAMALFGEKY--------GEVVRVVQ 659

Query: 176 QGEW-FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
            G++  +LC G HVR+T  +  F  + +                  Y      +  L Q 
Sbjct: 660 VGKYSIELCGGVHVRNTADIGLFKIVSETGIGAGTRRIEAVTGKEAYRFVTEQENTLKQT 719

Query: 235 LYFLEESEKRDHRKLAR-EMDLFHIAEDG 262
              L+ + K   +K+ + + DL  +  + 
Sbjct: 720 ANLLKTTTKETPQKVEQLQADLREVRREN 748


>gi|333006955|gb|EGK26450.1| seryl-tRNA synthetase [Shigella flexneri K-218]
          Length = 430

 Score = 64.0 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 64/188 (34%), Gaps = 10/188 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M     +   Y E   P +++Q     +G    +  ++F  +  ++   D
Sbjct: 170 ARMHRALSQFMLDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLFHTRPLEEEA-D 228

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
              +AL P        +    +    +LP+++      +R+E         GL+R+  F 
Sbjct: 229 TSNYALIPTAEVPLTNLVRGEIIDEDDLPIKMIAHTPCFRSEAGSYGRDTRGLIRMHQFD 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E       ++      + +  G     + L T              +W  
Sbjct: 289 KVEMVQIVRPEDSMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMGFGACKTYDLEVWIP 348

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 349 AQNTYREI 356


>gi|327402220|ref|YP_004343058.1| alanyl-tRNA synthetase [Fluviicola taffensis DSM 16823]
 gi|327317728|gb|AEA42220.1| alanyl-tRNA synthetase [Fluviicola taffensis DSM 16823]
          Length = 871

 Score = 64.0 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 34/165 (20%), Positives = 72/165 (43%), Gaps = 13/165 (7%)

Query: 44  NGKVCDLSDPVR---EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII 100
           NG +  L D +    +G       E+ R L+   HS  H++  A++++        G ++
Sbjct: 529 NGLIVHLVDELPEKIDGQFTARVNEESRRLSASNHSATHLLHHALRTVLGAHVEQKGSLV 588

Query: 101 EDGF-YYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLK-QYLSHEKARELFESKKEAYK 158
              +  +DF      + +E+A+IE  + + I ++    + + +  + A+E+        K
Sbjct: 589 NPNYLRFDFSHFSKVTDEEMAKIEAIVIDGIRQNLSLEESRNVPIDAAQEMGAMALFGEK 648

Query: 159 VEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKV 203
                     + V + + G+  +LC G HV++TGQ+  F    + 
Sbjct: 649 Y--------GDTVRVIKFGDSIELCGGTHVQNTGQIGLFKIQSES 685


>gi|116872949|ref|YP_849730.1| histidyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|116741827|emb|CAK20951.1| histidyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
          Length = 425

 Score = 64.0 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 69/430 (16%), Positives = 135/430 (31%), Gaps = 63/430 (14%)

Query: 265 VIFWHRKGWK--------IFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
           +     +G +         +  L    ++  ++  YEEI TP        +         
Sbjct: 1   MDLQLPRGTRDILPEEVSKWHFLEDEFKKVCENYQYEEIRTPIF---EHTELFERGVGDS 57

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF-NHGLKSYRELPVRLAEFGSVYRNEPS 374
            ++ + +      K  R+  L+P      V  F  H L      P+++     ++R E  
Sbjct: 58  TDIVSKEMYTFQDKGGRSLTLRPEGTASVVRAFVEHKLYGEVSQPIKMYYNEPMFRYERP 117

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM---------- 424
                  R R FTQ       + +   +   ++ +L ++ ++  G   I           
Sbjct: 118 ----QGGRQRQFTQMGIEALGSDDPSIDV--EVISLAMAFFRKIGLTNIKLVINSLGDKE 171

Query: 425 ----VKLSTRPEKRVGSDALWDDAENIMK------GVLDTIKN------SSQDRINTGVL 468
                + +         D     AE  ++       +LD  K+       S   I   + 
Sbjct: 172 SRLKHREALVAHFEPHIDEF--CAECQVRLHKNPLRILDCKKDHENPLIKSAPSILDFLN 229

Query: 469 LGEGAF------YGPKFEYILKD----AIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC 518
               A+      Y    E   +       G D+   T     ++   F A        + 
Sbjct: 230 EESIAYFENVKNYLTALEIPFEIDPTMVRGLDYYNHTTFEIMSVEEGFGAKTTLCGGGRY 289

Query: 519 HPVMIHRAVFGSIERFIGIMIE------NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIA 572
           H ++       +     GI +E                 P++  V T    A   A  + 
Sbjct: 290 HGLVREFGGPDTPGIGFGIGVERILLALEKADIKIPAKKPLKVYVITAQPEAELKAVTLV 349

Query: 573 NLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
           N L+ + +S E D+    +  ++++ + KK    II G++E    +  ++   S   + V
Sbjct: 350 NKLRQNGISAEKDYLKRKLKAQLKDANRKKANYTIILGEEELQTGNYQLKHMESGEQEAV 409

Query: 633 SLLDAIPILT 642
           S    I  LT
Sbjct: 410 SEQTIIEKLT 419


>gi|256028560|ref|ZP_05442394.1| histidyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289766480|ref|ZP_06525858.1| histidyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289718035|gb|EFD82047.1| histidyl-tRNA synthetase [Fusobacterium sp. D11]
          Length = 413

 Score = 64.0 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 63/399 (15%), Positives = 132/399 (33%), Gaps = 63/399 (15%)

Query: 288 KDDYEEINTPQVLDQHLWQ--QSGHWDSYRANMFAVKCADDTIKDLR-TFALKPMNCPGH 344
              Y  + TP   +  L++       D     M+  K   D    LR       + C   
Sbjct: 34  NYGYNFVKTPIFEETELFKRGIGEATDVVEKEMYTFKDRGDRSITLRPENTASLVRCYLE 93

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
            A++     S      R    GS++R E   +     R R F Q    VF   E+     
Sbjct: 94  NAIYAKEEIS------RFYYNGSMFRYERPQA----GRQREFNQIGLEVFG--EKSPKVD 141

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            ++  +     +  G   + VK+++   K   +       E+  K  LD + +  +DRIN
Sbjct: 142 AEVIAIGYKFLEKLGITDLEVKINSVGSKESRTIYREKLIEHFSKH-LDDMCDDCKDRIN 200

Query: 465 TGVL-------LGEGAFY--GPKF-EYILKDAIGR----------------DWQCGTIQV 498
              L         +  FY   P   +++ +D                    +       +
Sbjct: 201 RNPLRLLDCKVDKDKDFYKSAPNIIDFLFEDERKHYEDVKKYLDVFGIKYTEDSTLVRGL 260

Query: 499 DFNLPSRFNAFYVN------------SHS---EKCHPVMIHRAVFGSIERFIGIMIENFK 543
           D+   + F                    +   E     +        +ER + ++ EN+ 
Sbjct: 261 DYYSSTVFEIVTNKLGSQGTVLGGGRYDNLLKELGDKDIPAVGFATGVERIMMLLGENYP 320

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
            N P         +  +  +  E A +IA  L+ + + +  D+  + +   +++     +
Sbjct: 321 KNNPD------VYIAWLGENTSETALKIAESLRDNDIKVYIDYSEKGMKSHMKKADKLSV 374

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
              II G+ E ++  + ++ F +   ++V + + +  + 
Sbjct: 375 RYCIILGEDELNKGIVLLKDFSTREQKEVKIEEIVNQIK 413


>gi|281422088|ref|ZP_06253087.1| histidine--tRNA ligase [Prevotella copri DSM 18205]
 gi|281403877|gb|EFB34557.1| histidine--tRNA ligase [Prevotella copri DSM 18205]
          Length = 454

 Score = 64.0 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 26/203 (12%), Positives = 65/203 (32%), Gaps = 22/203 (10%)

Query: 445 ENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPS 504
              +   L T+  +++  ++  +  G   + G  FE    D        G          
Sbjct: 270 TKFILDTLKTLGLNNEIELDLTLARGLNYYTGAIFEVKALDTPMGSITGGG--------- 320

Query: 505 RFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSP----IQAIVTTI 560
           R++            P +    +    +R   ++     G L L+        Q +    
Sbjct: 321 RYDNLT----GIFGLPGLSGVGISFGADRIYDVL-----GALDLYPKEAVNATQVLFINF 371

Query: 561 TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
                 Y   I +  ++  +  E       +  ++   + K IP +++ G+ E ++  + 
Sbjct: 372 GEKETAYCLPIVSAARAAGIRTEIFPDKAKMKKQMSYANAKNIPFVVLAGENEMAQGKVT 431

Query: 621 IRRFGSTTTQKVSLLDAIPILTK 643
           ++   +     V+  + I  + K
Sbjct: 432 LKNMETGEQTLVTAEELIAKVNK 454


>gi|164686346|ref|ZP_02210376.1| hypothetical protein CLOBAR_02784 [Clostridium bartlettii DSM
           16795]
 gi|164601948|gb|EDQ95413.1| hypothetical protein CLOBAR_02784 [Clostridium bartlettii DSM
           16795]
          Length = 424

 Score = 64.0 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 48/342 (14%), Positives = 106/342 (30%), Gaps = 46/342 (13%)

Query: 109 DKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK 168
           D E+     E+  ++ +M     +    +K+       +   +   +  KVE        
Sbjct: 35  DDERRELLKEVEVMKGEMNIESKKIPQLIKEGKDVTADKARLKELSDKIKVE-------D 87

Query: 169 ENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQ 228
           E V   ++   + L R P+V +    +       +    W             G      
Sbjct: 88  EKVKKVQEELRYRLLRIPNVPNEKVPQGETDADNIEERKW-------------GEPRKFD 134

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK 288
            +   +     +    D  + A+                   KG ++ ++L ++      
Sbjct: 135 FDFKAHWDIGTDLGILDFERAAKITGSRFTLYKD--------KGARLERSLYNFFLDTNT 186

Query: 289 --DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA 346
             + Y E   P + + + +  +G    +  +MF V            + L P        
Sbjct: 187 GVNGYTEFIPPFMANANSFLGTGQLPKFEEDMFKVDNG---------YYLIPTAEVPLTN 237

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNE 403
           +  + +  Y  LP+    +   +R+E   +     GL+R   F + +    C  E+ +NE
Sbjct: 238 IHANEILPYDALPLNYTAYTPCFRSEAGSAGRDTRGLVRQHQFNKVEMVKICAPEESYNE 297

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALW 441
             K+      + +  G    +V++ T              +W
Sbjct: 298 LEKLTANAEYLLQQLGLPYRVVRICTGDLGFTAAFKYDLEVW 339


>gi|300769636|ref|ZP_07079520.1| serine--tRNA ligase [Lactobacillus plantarum subsp. plantarum ATCC
           14917]
 gi|300492789|gb|EFK27973.1| serine--tRNA ligase [Lactobacillus plantarum subsp. plantarum ATCC
           14917]
          Length = 434

 Score = 64.0 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 38/241 (15%), Positives = 85/241 (35%), Gaps = 25/241 (10%)

Query: 210 GDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWH 269
            D +  +  R +G       +   +    E     D  + A+      +    +      
Sbjct: 127 PDEDSNVEMRKHGDIPTFDFKPKAHWELGESLGILDFDRAAKVAGARFVYYKDA------ 180

Query: 270 RKGWKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
             G  + + + S+M      K  Y EI  P +++      +G +  ++ +++ V+ +  T
Sbjct: 181 --GALLERAVYSFMLDLHTQKQGYHEIIPPYLVNAQTMYGTGQFPKFKEDVYTVESSGMT 238

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVR 384
           +         P         + + + S  +LP         YR+E   +     GL+R+ 
Sbjct: 239 LI--------PTAEVPLTNYYANEILSEDQLPTYFTAMTPCYRSEAGSAGRDTRGLIRMH 290

Query: 385 GFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDAL 440
            F + +   +C  E  ++E  K+ +    + ++ G    ++KLST              +
Sbjct: 291 QFHKVEMVKYCKPENSYDELEKLTDNAEEVLRELGLAYHVIKLSTGDTGFSSAKTYDVEV 350

Query: 441 W 441
           W
Sbjct: 351 W 351


>gi|254521834|ref|ZP_05133889.1| histidyl-tRNA synthetase [Stenotrophomonas sp. SKA14]
 gi|219719425|gb|EED37950.1| histidyl-tRNA synthetase [Stenotrophomonas sp. SKA14]
          Length = 465

 Score = 64.0 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 76/214 (35%), Gaps = 19/214 (8%)

Query: 436 GSDALWDDAENIMKGVLDTIKNSSQDR----INTGVLLGEGAFYGPKFEYILKDAIGRDW 491
           GS  +       ++ VL  ++          +N  +  G   + G  +E  L D      
Sbjct: 258 GSSEILRTGVAELREVLQLVQALGVPETAYCLNFSIARGLDYYTGTVYETTLTDHP---- 313

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI-GIMIENFKGNLPLWL 550
           Q G+I        R+     +    K   V I   +     +     +IE  +G      
Sbjct: 314 QIGSICSGG----RYEDLASHYSKSKLPGVGISIGLSRLFWQLREAGLIEGIEG------ 363

Query: 551 SPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           S +QA+V  +    +  + +IA  L++  ++ E     + I  + +  +   I  +++ G
Sbjct: 364 SSVQALVALMDEQGMPQSLDIARRLRAGGINTEVQMEPKKIGKQFQYAAKAGIRFVVLAG 423

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           + E +   + ++        +VS  +    L  E
Sbjct: 424 EDELARGVVAVKDLLREQQFEVSRDELASTLQVE 457



 Score = 38.2 bits (87), Expect = 4.5,   Method: Composition-based stats.
 Identities = 39/217 (17%), Positives = 74/217 (34%), Gaps = 20/217 (9%)

Query: 269 HRKGWKIFQTLISYMRRKIKD-DYEEINTPQ------VLDQHLWQQSGHWDSYRANMFAV 321
             +    FQ ++  +RR  +   +  + TP       +L +   +        ++     
Sbjct: 14  LPREQIAFQRMLDVIRRNYERFGFLPVETPVFELSDVLLTKSGGETERQVYFVQSTGALA 73

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL--PVRLAEFGSVYRNEPSGSLHG 379
             A+   + L   AL+       V +  +  +   EL  P R  +   VYR E +     
Sbjct: 74  NAAESGDRSLPEMALRF---DLTVPLARYVAEHEHELTFPFRRYQMQRVYRGERAQR--- 127

Query: 380 LMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDA 439
             R R F Q D  V            ++  +I +++ +       ++L+ R   R G   
Sbjct: 128 -GRFREFYQCDIDVIGKDSLSVRYDAEVLAVIHAVFSELRIGDFSIQLNNRKLMR-GFFE 185

Query: 440 LWDDAENIMK-GVLDTIKNSSQDRINT--GVLLGEGA 473
               AE   +  VL  +    +   +     L+GEG 
Sbjct: 186 SLGVAEGERQLAVLREVDKLDKRGADYVRETLVGEGF 222


>gi|254302703|ref|ZP_04970061.1| histidine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
 gi|148322895|gb|EDK88145.1| histidine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
          Length = 412

 Score = 64.0 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 69/427 (16%), Positives = 144/427 (33%), Gaps = 75/427 (17%)

Query: 270 RKGWK-------IFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQ--QSGHWDSYRANM 318
            KG K       +    IS + +K+     Y+   TP   +  L++       D     M
Sbjct: 7   PKGTKDIIGEDAVKYIYISNVTQKMFENYGYKFAKTPIFEETELFKRGIGEATDVVEKEM 66

Query: 319 FAVKCADDTIKDLR-TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSL 377
           +  K   D    LR       + C    +++     S      R    GS++R E   + 
Sbjct: 67  YTFKDKGDRSITLRPENTASMVRCYLENSIYAKEDIS------RFYYNGSMFRYERPQA- 119

Query: 378 HGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGS 437
               R R F Q    VF  K  + +   ++  +  +     G   +  ++        GS
Sbjct: 120 ---GRQREFNQIGVEVFGEKSPILDA--EVIAMGYNWLAKLGVTDL--EVKINSVGSKGS 172

Query: 438 DALW-DDAENIMKGVLDTIKNSSQDRINTGVL-------LGEGAFY--GPKF-EYILKDA 486
             ++ +      K  LD +    +DRIN   L        GE  FY   P   +Y+ +D 
Sbjct: 173 RTIYREKLVEHFKSHLDDMCEDCKDRINRNPLRLLDCKVDGEKDFYKSAPSIIDYLFEDE 232

Query: 487 IGRDWQCGT----------------IQVDFNLPSRFNAFYVN------------SHS--- 515
                +                     +D+   + F                    +   
Sbjct: 233 RKHYEEVKKYLTIFGIKYTEDPTLVRGLDYYSSTVFEIVTNKLGSQGTVLGGGRYDNLLK 292

Query: 516 EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLL 575
           E     +        +ER + ++++ +  ++P         +  +  S VE A +IA  L
Sbjct: 293 ELGDKDIPAFGFAAGVERVM-MLVDEYPKDVPD------IYIAWLGDSTVETAMKIAEDL 345

Query: 576 KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
           + + + +  D+ ++ +   +++    +    II G+ E ++  + ++ F +   ++V + 
Sbjct: 346 RKNDIKVYVDYSSKGMKAHMKKADKLETKYCIILGEDELNKGIVLLKDFSTREQKEVKIE 405

Query: 636 DAIPILT 642
           + I  + 
Sbjct: 406 EIINYIK 412


>gi|148978178|ref|ZP_01814708.1| alanyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
 gi|145962600|gb|EDK27876.1| alanyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
          Length = 860

 Score = 64.0 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 58/143 (40%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFS 115
             +E     + R+   + HS  H++  A++ +  E     G +++ D   +DF   +  +
Sbjct: 545 DKVEATVDAERRAAISLNHSATHLLHAALREVLGEHVAQKGSLVKPDNLRFDFSNLEAVT 604

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
             ++ ++E+ +   + ++       +  E A+E         K          + V +  
Sbjct: 605 PAQIKEVERLVNAQVRKNHVIETNIMDIESAKEKGAMALFGEKY--------DDEVRVLS 656

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G++  +LC G H  +TG +  F
Sbjct: 657 MGDFSTELCGGIHASNTGDIGLF 679


>gi|330719001|ref|ZP_08313601.1| seryl-tRNA synthetase [Leuconostoc fallax KCTC 3537]
          Length = 436

 Score = 64.0 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 70/188 (37%), Gaps = 16/188 (8%)

Query: 272 GWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G ++ + + ++M     K+ Y E+ TP V++      +G +  ++ + + V   D T   
Sbjct: 179 GARLERAVYNFMLDEHRKEGYTEMITPIVVNDSAMFGTGQYPKFQEDAYRVAGLDQT--- 235

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE---PSGSLHGLMRVRGFT 387
                  P         ++       +LP++       +R E         GL+R+  F 
Sbjct: 236 -----YIPTAEVPLTNYYSGETLPAEDLPIKFTALSPSFRKEAGAAGKDTRGLIRLHQFN 290

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +   F   EQ ++E  K+     +I +  G    ++ LST              +W  
Sbjct: 291 KVEMVKFTKPEQSYDELEKMTANAENILQKLGLPYHVIALSTGDMGFSAAKTYDVEVWMP 350

Query: 444 AENIMKGV 451
            + + + +
Sbjct: 351 QQQVYREI 358


>gi|306844100|ref|ZP_07476694.1| alanyl-tRNA synthetase [Brucella sp. BO1]
 gi|306275543|gb|EFM57275.1| alanyl-tRNA synthetase [Brucella sp. BO1]
          Length = 885

 Score = 64.0 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 33/141 (23%), Positives = 62/141 (43%), Gaps = 5/141 (3%)

Query: 57  GSIEIITPEDPRSLAVI-RHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPF 114
           G +  +  +  R   +   HS  H++ EA++          G  +  D   +DF   +P 
Sbjct: 545 GDVVELKVDSARRTRIRSNHSATHLLHEALRETLGTHVAQKGSLVAPDRLRFDFSHPKPI 604

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKAREL--FESKKEAYKVEI-LESIPAKENV 171
           S++EL  +E    EII +++P   + ++ + A          E Y  E+ + S+   ++ 
Sbjct: 605 SAEELEAVENLANEIILQNAPVTTRLMAVDDAIAEGAMALFGEKYGDEVRVVSMGTAKHG 664

Query: 172 TLYRQGEWFDLCRGPHVRSTG 192
           +   +    +LC G HVR TG
Sbjct: 665 SKAGKAYSVELCGGTHVRQTG 685


>gi|301169533|emb|CBW29134.1| alanyl-tRNA synthetase [Haemophilus influenzae 10810]
          Length = 874

 Score = 64.0 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 45/229 (19%), Positives = 87/229 (37%), Gaps = 36/229 (15%)

Query: 3   SDIKLT--FPDG-SIKNFPVHATGSDVAE----------SISRSLAKKAVAVAIN----- 44
           S  K+T  F DG S+++     +   + E           I  S    A  V  N     
Sbjct: 465 SQAKITALFYDGKSVESIEAGQSAVVILENTPFYAESGGQIGDSGYLSAQGVTFNVKDTQ 524

Query: 45  --GKVCDLSDPVREGSIEI------ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAI 96
             G+V      + +GS+++      I     R    + HS  H++  A++ I     V  
Sbjct: 525 KYGQVFGHIGELTQGSLKVGQSVNAIVDAKRRHNTSLNHSATHLLHAALRQILGLHVVQK 584

Query: 97  GPIIEDG-FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKE 155
           G ++ D    +DF + +  + ++L++IE  + + I  + P     +  + A+        
Sbjct: 585 GSLVSDKALRFDFAQPEAITKEQLSEIETLVNQKIRANFPVQTDIMDIDSAKAKGAMALF 644

Query: 156 AYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKFFKLMKV 203
             K          + V +   G++  +LC G H + TG +  F  + + 
Sbjct: 645 GEKY--------GDKVRVLTMGDFSIELCGGIHAKRTGDIGLFKIITEN 685


>gi|294852536|ref|ZP_06793209.1| alanyl-tRNA synthetase [Brucella sp. NVSL 07-0026]
 gi|294821125|gb|EFG38124.1| alanyl-tRNA synthetase [Brucella sp. NVSL 07-0026]
          Length = 885

 Score = 64.0 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 33/141 (23%), Positives = 62/141 (43%), Gaps = 5/141 (3%)

Query: 57  GSIEIITPEDPRSLAVI-RHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPF 114
           G +  +  +  R   +   HS  H++ EA++          G  +  D   +DF   +P 
Sbjct: 545 GDVVELKVDSARRTRIRSNHSATHLLHEALRETLGTHVAQKGSLVAPDRLRFDFSHPKPI 604

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKAREL--FESKKEAYKVEI-LESIPAKENV 171
           S++EL  +E    EII +++P   + ++ + A          E Y  E+ + S+   ++ 
Sbjct: 605 SAEELEAVENLANEIILQNAPVTTRLMAVDDAIAEGAMALFGEKYGDEVRVVSMGTAKHG 664

Query: 172 TLYRQGEWFDLCRGPHVRSTG 192
           +   +    +LC G HVR TG
Sbjct: 665 SKAGKAYSVELCGGTHVRQTG 685


>gi|261219548|ref|ZP_05933829.1| alanyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|260924637|gb|EEX91205.1| alanyl-tRNA synthetase [Brucella ceti M13/05/1]
          Length = 723

 Score = 64.0 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 33/141 (23%), Positives = 62/141 (43%), Gaps = 5/141 (3%)

Query: 57  GSIEIITPEDPRSLAVI-RHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPF 114
           G +  +  +  R   +   HS  H++ EA++          G  +  D   +DF   +P 
Sbjct: 383 GDVVELKVDSARRTRIRSNHSATHLLHEALRETLGTHVAQKGSLVAPDRLRFDFSHPKPI 442

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKAREL--FESKKEAYKVEI-LESIPAKENV 171
           S++EL  +E    EII +++P   + ++ + A          E Y  E+ + S+   ++ 
Sbjct: 443 SAEELEAVENLANEIILQNAPVTTRLMAVDDAIAEGAMALFGEKYGDEVRVVSMGTAKHG 502

Query: 172 TLYRQGEWFDLCRGPHVRSTG 192
           +   +    +LC G HVR TG
Sbjct: 503 SKAGKAYSVELCGGTHVRQTG 523


>gi|260581631|ref|ZP_05849428.1| alanyl-tRNA synthetase [Haemophilus influenzae NT127]
 gi|260095224|gb|EEW79115.1| alanyl-tRNA synthetase [Haemophilus influenzae NT127]
          Length = 874

 Score = 64.0 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 45/229 (19%), Positives = 87/229 (37%), Gaps = 36/229 (15%)

Query: 3   SDIKLT--FPDG-SIKNFPVHATGSDVAE----------SISRSLAKKAVAVAIN----- 44
           S  K+T  F DG S+++     +   + E           I  S    A  V  N     
Sbjct: 465 SQAKITALFYDGKSVESIEAGQSAVVILENTPFYAESGGQIGDSGYLSAQGVTFNVKDTQ 524

Query: 45  --GKVCDLSDPVREGSIEI------ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAI 96
             G+V      + +GS+++      I     R    + HS  H++  A++ I     V  
Sbjct: 525 KYGQVFGHIGELTQGSLKVGQSVNAIVDAKRRHNTSLNHSATHLLHAALRQILGLHVVQK 584

Query: 97  GPIIEDG-FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKE 155
           G ++ D    +DF + +  + ++L++IE  + + I  + P     +  + A+        
Sbjct: 585 GSLVSDKALRFDFAQPEAITKEQLSEIETLVNQKIRANFPVQTDIMDIDSAKAKGAMALF 644

Query: 156 AYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKFFKLMKV 203
             K          + V +   G++  +LC G H + TG +  F  + + 
Sbjct: 645 GEKY--------GDKVRVLTMGDFSIELCGGIHAKRTGDIGLFKIITEN 685


>gi|256113755|ref|ZP_05454559.1| alanyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|265995116|ref|ZP_06107673.1| alanyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|262766229|gb|EEZ12018.1| alanyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
          Length = 885

 Score = 64.0 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 33/141 (23%), Positives = 62/141 (43%), Gaps = 5/141 (3%)

Query: 57  GSIEIITPEDPRSLAVI-RHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPF 114
           G +  +  +  R   +   HS  H++ EA++          G  +  D   +DF   +P 
Sbjct: 545 GDVVELKVDSARRTRIRSNHSATHLLHEALRETLGTHVAQKGSLVAPDRLRFDFSHPKPI 604

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKAREL--FESKKEAYKVEI-LESIPAKENV 171
           S++EL  +E    EII +++P   + ++ + A          E Y  E+ + S+   ++ 
Sbjct: 605 SAEELEAVENLANEIILQNAPVTTRLMAVDDAIAEGAMALFGEKYGDEVRVVSMGTAKHG 664

Query: 172 TLYRQGEWFDLCRGPHVRSTG 192
           +   +    +LC G HVR TG
Sbjct: 665 SKAGKAYSVELCGGTHVRQTG 685


>gi|254719259|ref|ZP_05181070.1| alanyl-tRNA synthetase [Brucella sp. 83/13]
 gi|265984258|ref|ZP_06096993.1| alanyl-tRNA synthetase [Brucella sp. 83/13]
 gi|306838009|ref|ZP_07470867.1| alanyl-tRNA synthetase [Brucella sp. NF 2653]
 gi|264662850|gb|EEZ33111.1| alanyl-tRNA synthetase [Brucella sp. 83/13]
 gi|306406933|gb|EFM63154.1| alanyl-tRNA synthetase [Brucella sp. NF 2653]
          Length = 885

 Score = 64.0 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 33/141 (23%), Positives = 62/141 (43%), Gaps = 5/141 (3%)

Query: 57  GSIEIITPEDPRSLAVI-RHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPF 114
           G +  +  +  R   +   HS  H++ EA++          G  +  D   +DF   +P 
Sbjct: 545 GDVVELKVDSARRTRIRSNHSATHLLHEALRETLGTHVAQKGSLVAPDRLRFDFSHPKPI 604

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKAREL--FESKKEAYKVEI-LESIPAKENV 171
           S++EL  +E    EII +++P   + ++ + A          E Y  E+ + S+   ++ 
Sbjct: 605 SAEELEAVENLANEIILQNAPVTTRLMAVDDAIAEGAMALFGEKYGDEVRVVSMGTAKHG 664

Query: 172 TLYRQGEWFDLCRGPHVRSTG 192
           +   +    +LC G HVR TG
Sbjct: 665 SKAGKAYSVELCGGTHVRQTG 685


>gi|254717705|ref|ZP_05179516.1| alanyl-tRNA synthetase [Brucella ceti M13/05/1]
          Length = 768

 Score = 64.0 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 33/141 (23%), Positives = 62/141 (43%), Gaps = 5/141 (3%)

Query: 57  GSIEIITPEDPRSLAVI-RHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPF 114
           G +  +  +  R   +   HS  H++ EA++          G  +  D   +DF   +P 
Sbjct: 428 GDVVELKVDSARRTRIRSNHSATHLLHEALRETLGTHVAQKGSLVAPDRLRFDFSHPKPI 487

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKAREL--FESKKEAYKVEI-LESIPAKENV 171
           S++EL  +E    EII +++P   + ++ + A          E Y  E+ + S+   ++ 
Sbjct: 488 SAEELEAVENLANEIILQNAPVTTRLMAVDDAIAEGAMALFGEKYGDEVRVVSMGTAKHG 547

Query: 172 TLYRQGEWFDLCRGPHVRSTG 192
           +   +    +LC G HVR TG
Sbjct: 548 SKAGKAYSVELCGGTHVRQTG 568


>gi|254714269|ref|ZP_05176080.1| alanyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|261322043|ref|ZP_05961240.1| alanyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|261294733|gb|EEX98229.1| alanyl-tRNA synthetase [Brucella ceti M644/93/1]
          Length = 885

 Score = 64.0 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 33/141 (23%), Positives = 62/141 (43%), Gaps = 5/141 (3%)

Query: 57  GSIEIITPEDPRSLAVI-RHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPF 114
           G +  +  +  R   +   HS  H++ EA++          G  +  D   +DF   +P 
Sbjct: 545 GDVVELKVDSARRTRIRSNHSATHLLHEALRETLGTHVAQKGSLVAPDRLRFDFSHPKPI 604

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKAREL--FESKKEAYKVEI-LESIPAKENV 171
           S++EL  +E    EII +++P   + ++ + A          E Y  E+ + S+   ++ 
Sbjct: 605 SAEELEAVENLANEIILQNAPVTTRLMAVDDAIAEGAMALFGEKYGDEVRVVSMGTAKHG 664

Query: 172 TLYRQGEWFDLCRGPHVRSTG 192
           +   +    +LC G HVR TG
Sbjct: 665 SKAGKAYSVELCGGTHVRQTG 685


>gi|229844682|ref|ZP_04464821.1| alanyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
 gi|229812396|gb|EEP48086.1| alanyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
          Length = 874

 Score = 64.0 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 45/229 (19%), Positives = 87/229 (37%), Gaps = 36/229 (15%)

Query: 3   SDIKLT--FPDG-SIKNFPVHATGSDVAE----------SISRSLAKKAVAVAIN----- 44
           S  K+T  F DG S+++     +   + E           I  S    A  V  N     
Sbjct: 465 SQAKITALFYDGKSVESIEAGQSAVVILENTPFYAESGGQIGDSGYLSAQGVTFNVKDTQ 524

Query: 45  --GKVCDLSDPVREGSIEI------ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAI 96
             G+V      + +GS+++      I     R    + HS  H++  A++ I     V  
Sbjct: 525 KYGQVFGHIGELTQGSLKVGQSVNAIVDAKRRHNTSLNHSATHLLHAALRQILGLHVVQK 584

Query: 97  GPIIEDG-FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKE 155
           G ++ D    +DF + +  + ++L++IE  + + I  + P     +  + A+        
Sbjct: 585 GSLVSDKALRFDFAQPEAITKEQLSEIETLVNQKIRANFPVQTDIMDIDSAKAKGAMALF 644

Query: 156 AYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKFFKLMKV 203
             K          + V +   G++  +LC G H + TG +  F  + + 
Sbjct: 645 GEKY--------GDKVRVLTMGDFSIELCGGIHAKRTGDIGLFKIITEN 685


>gi|225852697|ref|YP_002732930.1| alanyl-tRNA synthetase [Brucella melitensis ATCC 23457]
 gi|256263812|ref|ZP_05466344.1| alanyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9]
 gi|225641062|gb|ACO00976.1| alanyl-tRNA synthetase [Brucella melitensis ATCC 23457]
 gi|263093940|gb|EEZ17874.1| alanyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9]
 gi|326409221|gb|ADZ66286.1| alanyl-tRNA synthetase [Brucella melitensis M28]
 gi|326538929|gb|ADZ87144.1| alanyl-tRNA synthetase [Brucella melitensis M5-90]
          Length = 885

 Score = 64.0 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 33/141 (23%), Positives = 62/141 (43%), Gaps = 5/141 (3%)

Query: 57  GSIEIITPEDPRSLAVI-RHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPF 114
           G +  +  +  R   +   HS  H++ EA++          G  +  D   +DF   +P 
Sbjct: 545 GDVVELKVDSARRTRIRSNHSATHLLHEALRETLGTHVAQKGSLVAPDRLRFDFSHPKPI 604

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKAREL--FESKKEAYKVEI-LESIPAKENV 171
           S++EL  +E    EII +++P   + ++ + A          E Y  E+ + S+   ++ 
Sbjct: 605 SAEELEAVENLANEIILQNAPVTTRLMAVDDAIAEGAMALFGEKYGDEVRVVSMGTAKHG 664

Query: 172 TLYRQGEWFDLCRGPHVRSTG 192
           +   +    +LC G HVR TG
Sbjct: 665 SKAGKAYSVELCGGTHVRQTG 685


>gi|221487207|gb|EEE25453.1| glycyl-tRNA synthetase, putative [Toxoplasma gondii GT1]
          Length = 771

 Score = 64.0 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 21/106 (19%), Positives = 43/106 (40%), Gaps = 2/106 (1%)

Query: 540 ENFKGNLPLWLSPIQAIVTTIT--SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           E      P  ++P + I+  I+   S VE  Q   +   +  +S + D    +I  +   
Sbjct: 643 ERCYMAFPAIIAPTKCIILPISSNPSFVELLQRARDACIARGISAKVDASTASIGKRYAR 702

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +     P  I    +   + ++ +R   S    +VSL DA+ ++ +
Sbjct: 703 NDEVGTPFAITVDFESLKDDTVTVRERDSMEQIRVSLSDAVDLVAR 748


>gi|148560301|ref|YP_001259121.1| alanyl-tRNA synthetase [Brucella ovis ATCC 25840]
 gi|205829997|sp|A5VQX4|SYA_BRUO2 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|148371558|gb|ABQ61537.1| alanyl-tRNA synthetase [Brucella ovis ATCC 25840]
          Length = 885

 Score = 64.0 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 33/141 (23%), Positives = 62/141 (43%), Gaps = 5/141 (3%)

Query: 57  GSIEIITPEDPRSLAVI-RHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPF 114
           G +  +  +  R   +   HS  H++ EA++          G  +  D   +DF   +P 
Sbjct: 545 GDVVELKVDSARRTRIRSNHSATHLLHEALRETLGTHVAQKGSLVAPDRLRFDFSHPKPI 604

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKAREL--FESKKEAYKVEI-LESIPAKENV 171
           S++EL  +E    EII +++P   + ++ + A          E Y  E+ + S+   ++ 
Sbjct: 605 SAEELEAVENLANEIILQNAPVTTRLMAVDDAIAEGAMALFGEKYGDEVRVVSMGTAKHG 664

Query: 172 TLYRQGEWFDLCRGPHVRSTG 192
           +   +    +LC G HVR TG
Sbjct: 665 SKAGKAYSVELCGGTHVRQTG 685


>gi|145636626|ref|ZP_01792293.1| alanyl-tRNA synthetase [Haemophilus influenzae PittHH]
 gi|145270152|gb|EDK10088.1| alanyl-tRNA synthetase [Haemophilus influenzae PittHH]
          Length = 874

 Score = 64.0 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 45/229 (19%), Positives = 87/229 (37%), Gaps = 36/229 (15%)

Query: 3   SDIKLT--FPDG-SIKNFPVHATGSDVAE----------SISRSLAKKAVAVAIN----- 44
           S  K+T  F DG S+++     +   + E           I  S    A  V  N     
Sbjct: 465 SQAKITALFYDGKSVESIEAGQSAVVILENTPFYAESGGQIGDSGYLSAQGVTFNVKDTQ 524

Query: 45  --GKVCDLSDPVREGSIEI------ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAI 96
             G+V      + +GS+++      I     R    + HS  H++  A++ I     V  
Sbjct: 525 KYGQVFGHIGELTQGSLKVGQSVNAIVDAKRRHNTSLNHSATHLLHAALRQILGLHVVQK 584

Query: 97  GPIIEDG-FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKE 155
           G ++ D    +DF + +  + ++L++IE  + + I  + P     +  + A+        
Sbjct: 585 GSLVSDKALRFDFAQPEAITKEQLSEIETLVNQKIRANFPVQTDIMDIDSAKAKGAMALF 644

Query: 156 AYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKFFKLMKV 203
             K          + V +   G++  +LC G H + TG +  F  + + 
Sbjct: 645 GEKY--------GDKVRVLTMGDFSIELCGGIHAKRTGDIGLFKIITEN 685


>gi|145640917|ref|ZP_01796499.1| alanyl-tRNA synthetase [Haemophilus influenzae R3021]
 gi|145274431|gb|EDK14295.1| alanyl-tRNA synthetase [Haemophilus influenzae 22.4-21]
          Length = 616

 Score = 64.0 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 45/229 (19%), Positives = 87/229 (37%), Gaps = 36/229 (15%)

Query: 3   SDIKLT--FPDG-SIKNFPVHATGSDVAE----------SISRSLAKKAVAVAIN----- 44
           S  K+T  F DG S+++     +   + E           I  S    A  V  N     
Sbjct: 334 SQAKITALFYDGKSVESIEAGQSAVVILENTPFYAESGGQIGDSGYLSAQGVTFNVKDTQ 393

Query: 45  --GKVCDLSDPVREGSIEI------ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAI 96
             G+V      + +GS+++      I     R    + HS  H++  A++ I     V  
Sbjct: 394 KYGQVFGHIGELTQGSLKVGQSVNAIVDAKRRHNTSLNHSATHLLHAALRQILGLHVVQK 453

Query: 97  GPIIEDG-FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKE 155
           G ++ D    +DF + +  + ++L++IE  + + I  + P     +  + A+        
Sbjct: 454 GSLVSDKALRFDFAQPEAITKEQLSEIETLVNQKIRANFPVQTDIMDIDSAKAKGAMALF 513

Query: 156 AYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKFFKLMKV 203
             K          + V +   G++  +LC G H + TG +  F  + + 
Sbjct: 514 GEKY--------GDKVRVLTMGDFSIELCGGIHAKRTGDIGLFKIITEN 554


>gi|17987072|ref|NP_539706.1| alanyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|23502078|ref|NP_698205.1| alanyl-tRNA synthetase [Brucella suis 1330]
 gi|62290112|ref|YP_221905.1| alanyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941]
 gi|82700035|ref|YP_414609.1| alanyl-tRNA synthetase [Brucella melitensis biovar Abortus 2308]
 gi|161619156|ref|YP_001593043.1| alanyl-tRNA synthetase [Brucella canis ATCC 23365]
 gi|163843466|ref|YP_001627870.1| alanyl-tRNA synthetase [Brucella suis ATCC 23445]
 gi|189024350|ref|YP_001935118.1| alanyl-tRNA synthetase [Brucella abortus S19]
 gi|225627671|ref|ZP_03785708.1| alanyl-tRNA synthetase [Brucella ceti str. Cudo]
 gi|237815619|ref|ZP_04594616.1| alanyl-tRNA synthetase [Brucella abortus str. 2308 A]
 gi|254689421|ref|ZP_05152675.1| alanyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
 gi|254693906|ref|ZP_05155734.1| alanyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
 gi|254697556|ref|ZP_05159384.1| alanyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
 gi|254701941|ref|ZP_05163769.1| alanyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
 gi|254704486|ref|ZP_05166314.1| alanyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
 gi|254706618|ref|ZP_05168446.1| alanyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|254710272|ref|ZP_05172083.1| alanyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|254730450|ref|ZP_05189028.1| alanyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
 gi|256031766|ref|ZP_05445380.1| alanyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
 gi|256044851|ref|ZP_05447755.1| alanyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|256061281|ref|ZP_05451431.1| alanyl-tRNA synthetase [Brucella neotomae 5K33]
 gi|256159936|ref|ZP_05457654.1| alanyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|256255167|ref|ZP_05460703.1| alanyl-tRNA synthetase [Brucella ceti B1/94]
 gi|256257667|ref|ZP_05463203.1| alanyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|256369625|ref|YP_003107135.1| alanyl-tRNA synthetase [Brucella microti CCM 4915]
 gi|260168900|ref|ZP_05755711.1| alanyl-tRNA synthetase [Brucella sp. F5/99]
 gi|260546661|ref|ZP_05822400.1| alanyl-tRNA synthetase [Brucella abortus NCTC 8038]
 gi|260565546|ref|ZP_05836030.1| alanyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|260566269|ref|ZP_05836739.1| alanyl-tRNA synthetase [Brucella suis bv. 4 str. 40]
 gi|260754944|ref|ZP_05867292.1| alanine-tRNA ligase [Brucella abortus bv. 6 str. 870]
 gi|260758160|ref|ZP_05870508.1| alanine-tRNA ligase [Brucella abortus bv. 4 str. 292]
 gi|260761986|ref|ZP_05874329.1| alanine-tRNA ligase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260883954|ref|ZP_05895568.1| alanyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|261214196|ref|ZP_05928477.1| alanine-tRNA ligase [Brucella abortus bv. 3 str. Tulya]
 gi|261222364|ref|ZP_05936645.1| alanyl-tRNA synthetase [Brucella ceti B1/94]
 gi|261314078|ref|ZP_05953275.1| alanyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|261317834|ref|ZP_05957031.1| alanyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|261325289|ref|ZP_05964486.1| alanyl-tRNA synthetase [Brucella neotomae 5K33]
 gi|261752508|ref|ZP_05996217.1| alanyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
 gi|261755167|ref|ZP_05998876.1| alanyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
 gi|261758391|ref|ZP_06002100.1| alanyl-tRNA synthetase [Brucella sp. F5/99]
 gi|265988865|ref|ZP_06101422.1| alanyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
 gi|265991279|ref|ZP_06103836.1| alanyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|265998329|ref|ZP_06110886.1| alanyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|297248508|ref|ZP_06932226.1| alanyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196]
 gi|54039648|sp|P67009|SYA_BRUSU RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|54042023|sp|P67008|SYA_BRUME RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|75496699|sp|Q57CU0|SYA_BRUAB RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|123547531|sp|Q2YRU8|SYA_BRUA2 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|205829996|sp|A9M5L7|SYA_BRUC2 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|205829998|sp|B0CGZ9|SYA_BRUSI RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|17982730|gb|AAL51970.1| alanyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|23348036|gb|AAN30120.1| alanyl-tRNA synthetase [Brucella suis 1330]
 gi|62196244|gb|AAX74544.1| AlaS, alanyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941]
 gi|82616136|emb|CAJ11179.1| Alanyl-tRNA synthetase, class IIc:Phosphoesterase,
           DHHA1:Alanyl-transfer RNA synthetase [Brucella
           melitensis biovar Abortus 2308]
 gi|161335967|gb|ABX62272.1| alanyl-tRNA synthetase [Brucella canis ATCC 23365]
 gi|163674189|gb|ABY38300.1| alanyl-tRNA synthetase [Brucella suis ATCC 23445]
 gi|189019922|gb|ACD72644.1| Alanyl-tRNA synthetase, class Iic [Brucella abortus S19]
 gi|225617676|gb|EEH14721.1| alanyl-tRNA synthetase [Brucella ceti str. Cudo]
 gi|237788917|gb|EEP63128.1| alanyl-tRNA synthetase [Brucella abortus str. 2308 A]
 gi|255999787|gb|ACU48186.1| alanyl-tRNA synthetase [Brucella microti CCM 4915]
 gi|260095711|gb|EEW79588.1| alanyl-tRNA synthetase [Brucella abortus NCTC 8038]
 gi|260151614|gb|EEW86708.1| alanyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|260155787|gb|EEW90867.1| alanyl-tRNA synthetase [Brucella suis bv. 4 str. 40]
 gi|260668478|gb|EEX55418.1| alanine-tRNA ligase [Brucella abortus bv. 4 str. 292]
 gi|260672418|gb|EEX59239.1| alanine-tRNA ligase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260675052|gb|EEX61873.1| alanine-tRNA ligase [Brucella abortus bv. 6 str. 870]
 gi|260873482|gb|EEX80551.1| alanyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|260915803|gb|EEX82664.1| alanine-tRNA ligase [Brucella abortus bv. 3 str. Tulya]
 gi|260920948|gb|EEX87601.1| alanyl-tRNA synthetase [Brucella ceti B1/94]
 gi|261297057|gb|EEY00554.1| alanyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|261301269|gb|EEY04766.1| alanyl-tRNA synthetase [Brucella neotomae 5K33]
 gi|261303104|gb|EEY06601.1| alanyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|261738375|gb|EEY26371.1| alanyl-tRNA synthetase [Brucella sp. F5/99]
 gi|261742261|gb|EEY30187.1| alanyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
 gi|261744920|gb|EEY32846.1| alanyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
 gi|262552797|gb|EEZ08787.1| alanyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|263002063|gb|EEZ14638.1| alanyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|264661062|gb|EEZ31323.1| alanyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
 gi|297175677|gb|EFH35024.1| alanyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196]
          Length = 885

 Score = 64.0 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 33/141 (23%), Positives = 62/141 (43%), Gaps = 5/141 (3%)

Query: 57  GSIEIITPEDPRSLAVI-RHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPF 114
           G +  +  +  R   +   HS  H++ EA++          G  +  D   +DF   +P 
Sbjct: 545 GDVVELKVDSARRTRIRSNHSATHLLHEALRETLGTHVAQKGSLVAPDRLRFDFSHPKPI 604

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKAREL--FESKKEAYKVEI-LESIPAKENV 171
           S++EL  +E    EII +++P   + ++ + A          E Y  E+ + S+   ++ 
Sbjct: 605 SAEELEAVENLANEIILQNAPVTTRLMAVDDAIAEGAMALFGEKYGDEVRVVSMGTAKHG 664

Query: 172 TLYRQGEWFDLCRGPHVRSTG 192
           +   +    +LC G HVR TG
Sbjct: 665 SKAGKAYSVELCGGTHVRQTG 685


>gi|255660022|ref|ZP_05405431.1| seryl-tRNA synthetase [Mycoplasma genitalium G37]
          Length = 375

 Score = 64.0 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 39/244 (15%), Positives = 87/244 (35%), Gaps = 19/244 (7%)

Query: 219 RIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWK 274
            +        + L +    + + +   HR+L  +++L    +     G+  + +  K  K
Sbjct: 109 PVGKNESANLELLKEGRKPVFDFKPLPHRELCEKLNLVAFDKATKISGTRFVAYTDKAAK 168

Query: 275 IFQTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           + + + + M    K  Y+E N P V+++   + +G    ++ ++F +        +   +
Sbjct: 169 LLRAITNLMIDLNKSKYQEWNLPVVINELSLRSTGQLPKFKDDVFKL--------ENTRY 220

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE---PSGSLHGLMRVRGFTQDDA 391
            L P      + +  + + +  +LP      G  +R E         G +R+  F + + 
Sbjct: 221 YLSPTLEVQLINLHANEIFNEEDLPKYYTATGINFRQEAGSAGKQTKGTIRLHQFQKTEL 280

Query: 392 HVFCTKEQMFNECLKIHNLIISIYK----DFGFEKIMVKLSTRPEKRVGSDALWDDAENI 447
             FC  E   NE   +      I K     F    +         ++     +W  A N 
Sbjct: 281 VKFCKPENAINELEAMVRDAEQILKALKLPFRRLLLCTGDMGFSAEKTYDLEVWMAASNE 340

Query: 448 MKGV 451
            + V
Sbjct: 341 YREV 344


>gi|12044855|ref|NP_072665.1| seryl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|1351174|sp|P47251|SYS_MYCGE RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|1045673|gb|AAC71221.1| seryl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|166078963|gb|ABY79581.1| seryl-tRNA synthetase [synthetic Mycoplasma genitalium JCVI-1.0]
          Length = 417

 Score = 64.0 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 39/244 (15%), Positives = 87/244 (35%), Gaps = 19/244 (7%)

Query: 219 RIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWK 274
            +        + L +    + + +   HR+L  +++L    +     G+  + +  K  K
Sbjct: 109 PVGKNESANLELLKEGRKPVFDFKPLPHRELCEKLNLVAFDKATKISGTRFVAYTDKAAK 168

Query: 275 IFQTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           + + + + M    K  Y+E N P V+++   + +G    ++ ++F +        +   +
Sbjct: 169 LLRAITNLMIDLNKSKYQEWNLPVVINELSLRSTGQLPKFKDDVFKL--------ENTRY 220

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE---PSGSLHGLMRVRGFTQDDA 391
            L P      + +  + + +  +LP      G  +R E         G +R+  F + + 
Sbjct: 221 YLSPTLEVQLINLHANEIFNEEDLPKYYTATGINFRQEAGSAGKQTKGTIRLHQFQKTEL 280

Query: 392 HVFCTKEQMFNECLKIHNLIISIYK----DFGFEKIMVKLSTRPEKRVGSDALWDDAENI 447
             FC  E   NE   +      I K     F    +         ++     +W  A N 
Sbjct: 281 VKFCKPENAINELEAMVRDAEQILKALKLPFRRLLLCTGDMGFSAEKTYDLEVWMAASNE 340

Query: 448 MKGV 451
            + V
Sbjct: 341 YREV 344


>gi|294872827|ref|XP_002766422.1| prolyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
 gi|239867266|gb|EEQ99139.1| prolyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
          Length = 94

 Score = 64.0 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 22/95 (23%), Positives = 41/95 (43%), Gaps = 2/95 (2%)

Query: 344 HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV-FCTKEQMFN 402
               +   ++SYR+LP++L ++ +V R E        +R R F   + H    TKE+   
Sbjct: 1   MYPSYADWIRSYRDLPLKLNQWTNVVRWEFKQPT-PFIRTREFLWQEGHTAHATKEEAVE 59

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGS 437
               I +L   +Y+      ++  + +  EK  G 
Sbjct: 60  LVYSILDLYKMLYEQLLAVPVVQGVKSEMEKFAGE 94


>gi|237742494|ref|ZP_04572975.1| histidyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
 gi|229430142|gb|EEO40354.1| histidyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
          Length = 412

 Score = 64.0 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 72/426 (16%), Positives = 147/426 (34%), Gaps = 73/426 (17%)

Query: 270 RKGWK-------IFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQ--QSGHWDSYRANM 318
            KG K       +    IS + +K+     Y+   TP   +  L++       D     M
Sbjct: 7   PKGTKDIIGEDAVKYIYISNVTQKMFENYGYKFAKTPIFEETELFKRGIGEATDVVEKEM 66

Query: 319 FAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLH 378
           +  K   D     R+  L+P N    V  +       +E   R    GS++R E   +  
Sbjct: 67  YTFKDKGD-----RSITLRPENTASMVRCYLENSIYAKEDVSRFYYNGSMFRYERPQA-- 119

Query: 379 GLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD 438
              R R F Q    VF  K  + +   ++  +  ++    G   +  ++        GS 
Sbjct: 120 --GRQREFNQIGVEVFGEKSPILDA--EVIAMGYNLLTKLGVTDL--EVKINSVGSKGSR 173

Query: 439 ALW-DDAENIMKGVLDTIKNSSQDRINTGVL-------LGEGAFY--GPKF-EYILKDAI 487
            ++ +      K  LD +    +DRIN   L        GE  FY   P   +Y+ +D  
Sbjct: 174 TVYREKLVEHFKSHLDDMCEDCRDRINRNPLRLLDCKVDGEKDFYKSAPSIIDYLFEDER 233

Query: 488 GRDWQCGT----------------IQVDFNLPSRFNAFYVN------------SHS---E 516
               +                     +D+   + F                    +   E
Sbjct: 234 KHYEEVKKYLTIFGIKYTEDPTLVRGLDYYSSTVFEIVTNKLGSQGTVLGGGRYDNLLKE 293

Query: 517 KCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLK 576
                +        +ER I ++I+++  ++P         +  +  + VE A +IA  L+
Sbjct: 294 LGDKEIPAVGFAAGVER-IMMLIDDYPRDIPD------VYIAWLGDNTVETAMKIAEDLR 346

Query: 577 SHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
            + + +  D+ ++ +   +++    +    II G+ E ++  + ++ F +   ++V + D
Sbjct: 347 KNDIKVYVDYSSKGMKAHMKKADKLETKYCIILGEDELNKGVVLLKDFSTREQKEVKIED 406

Query: 637 AIPILT 642
               + 
Sbjct: 407 ITNQIK 412


>gi|320546404|ref|ZP_08040719.1| alanine--tRNA ligase [Streptococcus equinus ATCC 9812]
 gi|320448789|gb|EFW89517.1| alanine--tRNA ligase [Streptococcus equinus ATCC 9812]
          Length = 891

 Score = 64.0 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 40/188 (21%), Positives = 79/188 (42%), Gaps = 21/188 (11%)

Query: 23  GSDVAESISRSLAKKAVAVAI-------NGK---VCDLSDPVREGSIEIITPEDPRSLAV 72
           G  VA+       K  +   +       NG+     ++   +  G+   +  +  R  +V
Sbjct: 523 GGQVADHGVIKNDKGDIVARVTDVQKAPNGQALHTVEVLASLSVGTTYTLEIDSKRRHSV 582

Query: 73  I-RHSCAHIMAEAVQSIWPEVQVAIGPIIEDGF-YYDFDKEQPFSSDELAQIEKKMQEII 130
           I  H+  H++  A+ ++  E     G + E+GF  +DF   +  ++DEL QIE+++ + I
Sbjct: 583 IKNHTATHLLHAALHNVIGEHATQAGSLNEEGFLRFDFTHFEAVTADELRQIEEEVNQQI 642

Query: 131 ARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVR 189
               P +      + A+ +        K          +NV +   G++  +LC G HV 
Sbjct: 643 WNAIPVITVETDIDTAKSMGAMALFGEKY--------GKNVRVVTIGDYSIELCGGTHVS 694

Query: 190 STGQVKKF 197
           +T ++  F
Sbjct: 695 NTAEIGIF 702


>gi|297544523|ref|YP_003676825.1| alanyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|296842298|gb|ADH60814.1| alanyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 877

 Score = 64.0 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 62/139 (44%), Gaps = 10/139 (7%)

Query: 67  PRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDELAQIEKK 125
            R+ A   H+  H++ +A++ I  +     G  + +D   +DF   Q  + +EL +IE +
Sbjct: 555 SRNNAARNHTATHLLHKALKEILGDHVHQAGSLVADDRLRFDFSHYQAVTKEELKKIENR 614

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCR 184
           + E I +      +  ++++A +         K          + V + R  ++  +LC 
Sbjct: 615 VNEKIYQSLNVYIEEKTYDEALKEGAVALFTEKY--------GDKVRVVRIDDYSVELCG 666

Query: 185 GPHVRSTGQVKKFFKLMKV 203
           G HV++T ++  F  + + 
Sbjct: 667 GTHVKNTNEIGLFKVVSES 685


>gi|289578243|ref|YP_003476870.1| alanyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
 gi|289527956|gb|ADD02308.1| alanyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
          Length = 877

 Score = 64.0 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 62/139 (44%), Gaps = 10/139 (7%)

Query: 67  PRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDELAQIEKK 125
            R+ A   H+  H++ +A++ I  +     G  + +D   +DF   Q  + +EL +IE +
Sbjct: 555 SRNNAARNHTATHLLHKALKEILGDHVHQAGSLVADDRLRFDFSHYQAVTKEELKKIENR 614

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCR 184
           + E I +      +  ++++A +         K          + V + R  ++  +LC 
Sbjct: 615 VNEKIYQSLNVYIEEKTYDEALKEGAVALFTEKY--------GDKVRVVRIDDYSVELCG 666

Query: 185 GPHVRSTGQVKKFFKLMKV 203
           G HV++T ++  F  + + 
Sbjct: 667 GTHVKNTNEIGLFKVVSES 685


>gi|317500249|ref|ZP_07958478.1| alanine-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|331087517|ref|ZP_08336451.1| alanyl-tRNA synthetase 1 [Lachnospiraceae bacterium 3_1_46FAA]
 gi|316898345|gb|EFV20387.1| alanine-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|330406269|gb|EGG85786.1| alanyl-tRNA synthetase 1 [Lachnospiraceae bacterium 3_1_46FAA]
          Length = 880

 Score = 64.0 bits (154), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 29/138 (21%), Positives = 58/138 (42%), Gaps = 10/138 (7%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFS 115
             + +      R+L+   HS  H++ +A++++        G  + ED   +DF      +
Sbjct: 548 DKVVLEVDAKKRALSARNHSATHLLQKALRTVLGSHVEQAGSSVNEDRLRFDFTHFSAMT 607

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            DE+ Q+EK + E IA+      + +  E+A++         K          + V +  
Sbjct: 608 EDEITQVEKLVNESIAKAYDVDIKNMPIEEAKKTGAQALFGEKY--------GDIVRVVN 659

Query: 176 QGEW-FDLCRGPHVRSTG 192
            G++  + C G HV +T 
Sbjct: 660 MGDYSIEFCGGTHVNNTS 677


>gi|301336273|ref|ZP_07224475.1| seryl-tRNA synthetase [Chlamydia muridarum MopnTet14]
          Length = 428

 Score = 64.0 bits (154), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 39/249 (15%), Positives = 84/249 (33%), Gaps = 20/249 (8%)

Query: 210 GDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWH 269
            D +   + + +G   +       ++   E     D +  A+       A   +GV+   
Sbjct: 115 PDKSGNQVIKSHGKLPSFTFPPKHHMQLNEALRILDFKLPAKTTGSGWPAYKNTGVL--- 171

Query: 270 RKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
              W +   L++   ++    ++    P ++ + +   SG    +    + V+  +    
Sbjct: 172 -LEWALLTYLLN---KQQSHGFQLWLPPLLVKRDILFGSGQIPKFDGQYYRVEDGE---- 223

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS---GSLHGLMRVRGF 386
             ++  L P          +  + + ++LP+  A F   +R E         GL+RV  F
Sbjct: 224 --QSLFLIPTAEVVLNGFHSQEILNEQDLPLYYAAFTPCFRREAGAGGSHERGLVRVHQF 281

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG----SDALWD 442
            + +   F T EQ      K+  ++  I  +      +  LST              +W 
Sbjct: 282 HKIEMFAFTTPEQEETAYQKMIGIVEEILSELQLPYQLSLLSTGDMSFTAKKTIDAEVWL 341

Query: 443 DAENIMKGV 451
             +N    V
Sbjct: 342 PGQNAFYEV 350


>gi|222100452|ref|YP_002535020.1| Histidyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
 gi|221572842|gb|ACM23654.1| Histidyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
          Length = 385

 Score = 64.0 bits (154), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 58/395 (14%), Positives = 120/395 (30%), Gaps = 53/395 (13%)

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH 350
            EEI TP      L+ +S       +++   +      K  R+  L+P      V  F  
Sbjct: 1   MEEIRTPIFEQTELFVRS---VGEESDIVQKEMYTFEDKGGRSITLRPEGTAPIVRAFLE 57

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF------CTKEQMFNEC 404
                R    R    G ++R E   S     R+R F Q    +F         E +    
Sbjct: 58  NSFVNRGFQQRYYYIGPMFRYEKPQS----GRLRQFHQVGFEIFGSESPGADLETILAVD 113

Query: 405 LKIHNLIISIYKD----FGFEKIMVKLSTRPEKRVGS------DALWDDAENIMKGVLD- 453
             +  L ++ Y       G  +          +  G       D      E  +  +LD 
Sbjct: 114 NFLKRLGLTKYTIHLNSIGCPECRKNYREALREYYGKHLNDLCDDCKRRYETNILRLLDC 173

Query: 454 ----TIKNSSQDRINTGVLLGEGAFYGPK-------------------FEYILKDAIGRD 490
                +  ++    +         +   K                    +Y  +      
Sbjct: 174 KIDHELALNAPKSTDYLCEPCREHYEKLKDYLNEFEIKYVEDHTLVRGLDYYTRTVFEVR 233

Query: 491 WQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL 550
            +    Q       R++  + +         +      G IER +  +    +G      
Sbjct: 234 HEGLGAQNAIAGGGRYDGLFSDLGGG----TVPALGFAGGIERIVLAL--KAEGIEVPRK 287

Query: 551 SPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           +     V TI   A +   ++A  L+   L+++ D  N  ++ +++         ++I G
Sbjct: 288 NVHYIYVATIGEDAFKEGMKLAMELRKKGLNVDVDIMNRNLSGQLKHADRLGAKYVVIVG 347

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           D+E  +  + +R   +    ++    AI  + +++
Sbjct: 348 DEELEKGVVVLRNLETGDQVEIDKEFAIEYIFEKA 382


>gi|153814718|ref|ZP_01967386.1| hypothetical protein RUMTOR_00933 [Ruminococcus torques ATCC 27756]
 gi|145847749|gb|EDK24667.1| hypothetical protein RUMTOR_00933 [Ruminococcus torques ATCC 27756]
          Length = 880

 Score = 64.0 bits (154), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 29/138 (21%), Positives = 58/138 (42%), Gaps = 10/138 (7%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFS 115
             + +      R+L+   HS  H++ +A++++        G  + ED   +DF      +
Sbjct: 548 DKVVLEVDAKKRALSARNHSATHLLQKALRTVLGSHVEQAGSSVNEDRLRFDFTHFSAMT 607

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            DE+ Q+EK + E IA+      + +  E+A++         K          + V +  
Sbjct: 608 EDEITQVEKLVNESIAKAYDVDIKNMPIEEAKKTGAQALFGEKY--------GDIVRVVN 659

Query: 176 QGEW-FDLCRGPHVRSTG 192
            G++  + C G HV +T 
Sbjct: 660 MGDYSIEFCGGTHVNNTS 677


>gi|307243436|ref|ZP_07525592.1| serine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
 gi|306493160|gb|EFM65157.1| serine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
          Length = 426

 Score = 63.6 bits (153), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 50/343 (14%), Positives = 120/343 (34%), Gaps = 26/343 (7%)

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
           + L +I+  M      +          +   +     KE   ++   ++ +K+   + + 
Sbjct: 9   ENLDEIKLLMGRRGEGEFDPKDLDEVLDLDDKRKAILKEVEVLKNKSNVDSKKIPVMMKN 68

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKV---AGAYWRGDSNRPMLSRI-YGTAWNTQQELT 232
           GE  D  +      + ++K+F   ++       Y            +  G       E+ 
Sbjct: 69  GENIDEIKAELKVLSDKIKEFDVELREVEEKLVYRLMRIPNVPHPDVPQGETDEDNVEIR 128

Query: 233 QYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRRKI 287
           ++    +   E + H  +  ++D+          GS        G K+ ++LI +   + 
Sbjct: 129 RWGEPTKFDFEHKAHWDIGTDLDILDFERGGKITGSRFTVLKGLGSKLERSLIGFFLDQH 188

Query: 288 KD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
            +   Y E+  P + +++ +  +G    +  +MF +        +   + L P       
Sbjct: 189 TENNGYTEVIPPFIANRNSFIGTGQLPKFEEDMFKL--------EGLEYFLVPTAEVPVT 240

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFN 402
            ++N+ + S  +LP++   +   +R+E   +     GL+R   F + +   F   E  + 
Sbjct: 241 NLYNNEILSLDKLPIKHCAYTPCFRSEAGSAGRDTRGLVRQHQFNKVELVKFVKPEDSYQ 300

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALW 441
           E   + N    + +  G    +VK+ T              +W
Sbjct: 301 ELETLTNDAEKMLQLLGLPYRVVKICTGDLGFTAAKKYDLEVW 343


>gi|306820448|ref|ZP_07454084.1| alanine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
 gi|304551523|gb|EFM39478.1| alanine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
          Length = 880

 Score = 63.6 bits (153), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 60/143 (41%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFS 115
             +E++     R   +  H+  H++ +A++ +  +     G ++  D   +DF+     S
Sbjct: 550 DKVELLVDVKNRFATMRNHTATHLLHKALKVVLGDHIQQAGSLVSPDRLRFDFNHFAQVS 609

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            +EL ++E+ + E I        Q +  E A++         K          E V +  
Sbjct: 610 KEELMKVEQLVNEQIYNAIDVQTQVMDIEDAKKTGAMSLFDEKY--------GETVRVLS 661

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            GE+  + C G HV+++ ++  F
Sbjct: 662 IGEFSKEFCGGTHVKNSNEIGMF 684


>gi|307110880|gb|EFN59115.1| hypothetical protein CHLNCDRAFT_55978 [Chlorella variabilis]
          Length = 551

 Score = 63.6 bits (153), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 43/210 (20%), Positives = 87/210 (41%), Gaps = 19/210 (9%)

Query: 244 RDHRKLAREMDLFHIAE---DGSGVIFWHRKGWKIFQT-LISY-MRRKIKDDYEEINTPQ 298
           +DH +L  E+DL              ++ R    + +  L+++ M+R +   +  I TP 
Sbjct: 233 KDHLQLGEELDLIDFETGGVVSGAKFYYLRNEAALLELALVNWTMQRVVAAGFTPIITPD 292

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++ + ++++ G     RA+   +    D+        L          V    + +  +L
Sbjct: 293 LVRESVFEKCGFQP--RADNTQIYSVQDSA-----MCLTGTAEIPLGGVAMDRILAEAQL 345

Query: 359 PVRLAEFGSVYRNE---PSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           P+R+A FG  +R E      +  GL RV  F++ +  V CT EQ      ++ +L + ++
Sbjct: 346 PLRMAAFGHCFRTEAGAAGSASKGLYRVHQFSKVEMFVVCTPEQSDAVHQQLLDLEVGLF 405

Query: 416 KDFGFEKIMVKLSTR----PEKRVGSDALW 441
            D G    ++ +++     P  R      W
Sbjct: 406 SDLGLHFKVLDMASHDLGAPAYRKYDIEAW 435


>gi|313672443|ref|YP_004050554.1| seryl-tRNA synthetase [Calditerrivibrio nitroreducens DSM 19672]
 gi|312939199|gb|ADR18391.1| seryl-tRNA synthetase [Calditerrivibrio nitroreducens DSM 19672]
          Length = 421

 Score = 63.6 bits (153), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 37/243 (15%), Positives = 81/243 (33%), Gaps = 21/243 (8%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIF 276
           G   N   E+ ++          + H ++A ++D+           S    +   G ++ 
Sbjct: 114 GNDENDNPEVKKWGEKRVFDFTPKSHWEIAEKLDIVDFERGAKLSKSRFSIYKGLGSRLE 173

Query: 277 QTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFA 335
           + LI++M    I   Y EI  P +++      +G    +   +F          +     
Sbjct: 174 RALINFMLDTHIAKGYTEIIPPLLVNAKAMTGTGQLPKFEEELFKC--------ERDELY 225

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAH 392
           L P        ++   +  Y +LP+    +   +R E       + GL+R   F + +  
Sbjct: 226 LIPTAEVPVTNIYADEIIDYDKLPLNFVSYTPCFRREAGSYGKDVRGLIRQHQFNKVELV 285

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIM 448
                E+   E   + +    I +  G    ++KL +              +W   +N  
Sbjct: 286 KIVEPERSMEELEILTDNAAEILRLLGLPYRIIKLCSGDLGFSSSITYDIEVWLPGQNCY 345

Query: 449 KGV 451
           + +
Sbjct: 346 REI 348


>gi|283955931|ref|ZP_06373421.1| alanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336]
 gi|283792591|gb|EFC31370.1| alanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336]
          Length = 842

 Score = 63.6 bits (153), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 70/155 (45%), Gaps = 10/155 (6%)

Query: 52  DPVREGSIEIITPEDPRSLAVIRH-SCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFD 109
           + ++ G I     +  +   + RH S  H++  A++ I        G ++E +   +DF 
Sbjct: 525 EELKVGDIVHAKIDTEKREQIARHHSATHLLHHALREILGSHVSQAGSLVESNKLRFDFT 584

Query: 110 KEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKE 169
             +  S +EL  IEK++ E+I   S  + + +  E+A++         K +         
Sbjct: 585 HHKALSKEELESIEKRVNEMIINSSEAILENMPLEEAKKSGAIALFNEKYQ--------G 636

Query: 170 NVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVA 204
           NV +   GE  +LC G HV++T Q+  F+ + +  
Sbjct: 637 NVRVLTLGESKELCGGTHVKNTAQIGSFYIVKESG 671


>gi|203287678|ref|YP_002222693.1| alanyl-tRNA synthetase [Borrelia recurrentis A1]
 gi|201084898|gb|ACH94472.1| alanyl-tRNA synthetase [Borrelia recurrentis A1]
          Length = 592

 Score = 63.6 bits (153), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 51/130 (39%), Gaps = 10/130 (7%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           H+  H++ +A+Q +  +     G  I      +DF      + DE+ ++E  +   I   
Sbjct: 456 HTATHLLHKALQLVLGDHVRQKGSNITSQRLRFDFSHPCKMTDDEIKKVEDIVNLQIKNK 515

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTG 192
               K  +S E A           K E +        V++Y    +  ++C GPHV +T 
Sbjct: 516 LSVKKSIMSLEDALVKGAIALFGEKYEDI--------VSVYEIDGFSIEVCGGPHVNNTS 567

Query: 193 QVKKFFKLMK 202
           ++  F    +
Sbjct: 568 ELGTFKIQKE 577


>gi|219848336|ref|YP_002462769.1| seryl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
 gi|254783016|sp|B8G8S1|SYS_CHLAD RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|219542595|gb|ACL24333.1| seryl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
          Length = 426

 Score = 63.6 bits (153), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 26/152 (17%), Positives = 59/152 (38%), Gaps = 12/152 (7%)

Query: 272 GWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G ++ + +I ++    ++  Y+EI TP V+ + +   SG    +R N++          +
Sbjct: 169 GARLQRAVIQWLLDLHLRQGYQEIYTPFVVKESVLWASGQLPKFRDNLYR--------DE 220

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
                L P        ++   +    +LP+  A +   +R E       + G+ R   F 
Sbjct: 221 ESGLWLVPTAEVPLTGLYADEILEASQLPIYHAAYTPCFRKEQLSAGRDVRGIKRGHQFD 280

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           + + ++F   E+ +    K+        +  G
Sbjct: 281 KVEMYMFVKPEESYQALEKLRRDAEECARLLG 312


>gi|238792410|ref|ZP_04636044.1| Seryl-tRNA synthetase [Yersinia intermedia ATCC 29909]
 gi|238728336|gb|EEQ19856.1| Seryl-tRNA synthetase [Yersinia intermedia ATCC 29909]
          Length = 430

 Score = 63.6 bits (153), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 62/188 (32%), Gaps = 10/188 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M     +   Y+E   P +++      +G    +  ++F  K  ++   D
Sbjct: 170 ARMHRALSQFMLDLHTEKHGYQEAYVPYLVNHATLYGTGQLPKFGEDLFHTKPLEEE-SD 228

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
              +AL P        +    +     LP+++      +R+E         GL+R+  F 
Sbjct: 229 SSNYALIPTAEVPLTNLVRDEILEEDTLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFD 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E       ++      + +        V L T              +W  
Sbjct: 289 KVEMVQITRPEDSMAALEELTGHAEKVLQLLDLPYRKVLLCTGDMGFGSSKTYDLEVWLP 348

Query: 444 AENIMKGV 451
           A++  + +
Sbjct: 349 AQDTYREI 356


>gi|124267877|ref|YP_001021881.1| seryl-tRNA synthetase [Methylibium petroleiphilum PM1]
 gi|166222744|sp|A2SJA7|SYS_METPP RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|124260652|gb|ABM95646.1| seryl-tRNA synthetase [Methylibium petroleiphilum PM1]
          Length = 432

 Score = 63.6 bits (153), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 37/223 (16%), Positives = 82/223 (36%), Gaps = 15/223 (6%)

Query: 242 EKRDHRKLAREMDL-FHIAEDGSGVIF-WHRKG--WKIFQTLISYM--RRKIKDDYEEIN 295
             +DH  L   + L F      SG  F +  +G   ++ + L  +M   +  +  Y E  
Sbjct: 138 APKDHVDLGAPLGLDFETGAKLSGARFSFL-RGPVARLHRALAQFMLDVQTQEHGYTECY 196

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP ++++ + + +G    + A+MF V    D  +    + +   +           + + 
Sbjct: 197 TPYIVNREVLEGTGQLPKFEADMFWVTRGGDDDEATTQYLIS-TSEISLTNSVREQVLAA 255

Query: 356 RELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
            +LP++L      +R+E   +     G++R   F + +     T EQ       +     
Sbjct: 256 DQLPIKLTAHSPCFRSEAGSAGRDTRGMIRQHQFDKVEMVQITTAEQSDAALEAMVGHAE 315

Query: 413 SIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
           ++ +       ++ L T              +W  A+N  + +
Sbjct: 316 AVLQKLELPYRVITLCTGDMGFGAAKTYDLEVWLPAQNTYREI 358


>gi|262305707|gb|ACY45446.1| glu- + pro-tRNA synthetase [Artemia salina]
          Length = 134

 Score = 63.6 bits (153), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 48/133 (36%), Gaps = 18/133 (13%)

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           GA +    E  +  A GR  Q  T   +  N    F+  +   + E      + +  +G 
Sbjct: 1   GADFTTTVEAFVP-ASGRGIQGATSHMLGQNFSKMFDIGF--ENPETKERSHVWQNSWGI 57

Query: 531 IERFIGIMIENFKGNLPLWLSP----IQAIVTT----------ITSSAVEYAQEIANLLK 576
             R IG+++     N  L L P    +Q ++              +   E   ++   L 
Sbjct: 58  TTRTIGVLVMVHADNKGLVLPPRVASVQVVIIPCGITVDTKQEDRNRHYELCMQLEKELA 117

Query: 577 SHHLSIETDFRNE 589
            + + ++ D+R+ 
Sbjct: 118 GNGIRVKGDYRDN 130


>gi|114330803|ref|YP_747025.1| alanyl-tRNA synthetase [Nitrosomonas eutropha C91]
 gi|122314262|sp|Q0AHX2|SYA_NITEC RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|114307817|gb|ABI59060.1| alanyl-tRNA synthetase [Nitrosomonas eutropha C91]
          Length = 863

 Score = 63.6 bits (153), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 56/135 (41%), Gaps = 10/135 (7%)

Query: 72  VIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEII 130
              HS  H++  A++ I        G +++ D   +DF       ++E+ Q+E  +   I
Sbjct: 549 AYNHSATHLLHAALRQILGNHVTQKGSLVDADRLRFDFSHNSAMQANEIRQVENLVNAQI 608

Query: 131 ARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVR 189
            ++     Q +++++A +         K          + V +   G++  +LC G HV+
Sbjct: 609 RKNHEVATQLMAYDEAVKQGAMALFGEKY--------SDTVRVVSMGDFSTELCGGTHVQ 660

Query: 190 STGQVKKFFKLMKVA 204
            +G +  F  + +  
Sbjct: 661 HSGDIGFFRIVAESG 675


>gi|172056058|ref|YP_001812518.1| seryl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
 gi|229559948|sp|B1YGC4|SYS_EXIS2 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|171988579|gb|ACB59501.1| seryl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
          Length = 425

 Score = 63.6 bits (153), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 36/249 (14%), Positives = 89/249 (35%), Gaps = 25/249 (10%)

Query: 212 SNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRK 271
            +  ++ R  G       E   +   +E+ +  D  +  +           S  +F+   
Sbjct: 118 EDDNVVIREVGDKPAFDFEAVPHWDLMEQLKIVDVERAGKVTG--------SRFVFYRGA 169

Query: 272 GWKIFQTLISYMRR--KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
           G ++ + LI++M    + K+ Y EI  P ++++     +G    +  + F V+  +    
Sbjct: 170 GARLERALINFMMDLHQDKNGYTEILPPLMVNRDSMTGTGQLPKFEEDAFKVEDTN---- 225

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGF 386
               + L P        +    + S  +LP+  A +   +R+E   +     GL+R   F
Sbjct: 226 ----YFLVPTAEVPVTNMHRDEILSADQLPIGYAAYSQCFRSEAGSAGRDTRGLIRQHQF 281

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALWD 442
            + +   F   E+ + +   +      + K       ++ + T              +W 
Sbjct: 282 NKVELVRFVKPEESYEQLELLTGQAEEVLKLLKLPYQVLSMCTADLGFTAAKKYDIEVWM 341

Query: 443 DAENIMKGV 451
            ++ + + +
Sbjct: 342 PSQGVYREI 350


>gi|256840569|ref|ZP_05546077.1| seryl-tRNA synthetase [Parabacteroides sp. D13]
 gi|256737841|gb|EEU51167.1| seryl-tRNA synthetase [Parabacteroides sp. D13]
          Length = 424

 Score = 63.6 bits (153), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 67/198 (33%), Gaps = 16/198 (8%)

Query: 245 DHRKLAREMDLFHIA----EDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQV 299
            H +LA++ DL          G+G   +   G ++ + LI++ +       Y EI  P V
Sbjct: 143 PHWELAKKYDLIDFDLGVKITGAGFPVYKGLGARLQRALINFFLDEARDAGYLEIMPPTV 202

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           ++            Y       K       ++    L P        ++   +   ++LP
Sbjct: 203 VN--------SASGYGTGQLPDKEGQMYHCEVDDLYLIPTAEVPVTNIYRDVILDEKQLP 254

Query: 360 VRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ++   +   +R E       + GL R+  F++ +       E       ++ N +  + +
Sbjct: 255 IKNCAYTQCFRREAGSYGKDVRGLNRLHEFSKVELVRIDKPEHSKQSHQEMLNHVEGLLQ 314

Query: 417 DFGFEKIMVKLSTRPEKR 434
                  +++L       
Sbjct: 315 KLELPYRILRLCGGDMSF 332


>gi|256826794|ref|YP_003150753.1| seryl-tRNA synthetase [Cryptobacterium curtum DSM 15641]
 gi|256582937|gb|ACU94071.1| seryl-tRNA synthetase [Cryptobacterium curtum DSM 15641]
          Length = 427

 Score = 63.6 bits (153), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 66/189 (34%), Gaps = 16/189 (8%)

Query: 271 KGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
            G ++ + LI++M        ++E   P ++++     +G    +  ++F  K       
Sbjct: 170 LGARLERALINFMADTHTSRGFKEWWCPALVNRETMTGTGQLPKFEEDLFKTKD------ 223

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGF 386
              +  L P        +    +    ELP+R   F   +R E   +     GL+R+  F
Sbjct: 224 --ESLYLIPTAEVTLTNIHAGEVLDAAELPLRYTAFTPCFREEAGSAGRDTRGLIRLHQF 281

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWD 442
            + +   F   E+ ++E   +      I +       ++ L T              +W 
Sbjct: 282 DKVEMVKFAKPEEAYDELESMTAEAEYILQKLELPYRVISLCTGDLGFSAAKTYDLEVWL 341

Query: 443 DAENIMKGV 451
            + +  K +
Sbjct: 342 PSYDAYKEI 350


>gi|254555575|ref|YP_003061992.1| seryl-tRNA synthetase [Lactobacillus plantarum JDM1]
 gi|254044502|gb|ACT61295.1| seryl-tRNA synthetase [Lactobacillus plantarum JDM1]
          Length = 423

 Score = 63.6 bits (153), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 38/241 (15%), Positives = 84/241 (34%), Gaps = 25/241 (10%)

Query: 210 GDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWH 269
            D +  +  R +G       +   +    E     D  + A+      +    +      
Sbjct: 116 PDEDSNVEMRKHGDIPTFDFKPKAHWELGESLGILDFDRAAKVAGARFVYYKDA------ 169

Query: 270 RKGWKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
             G  + + + S+M      K  Y EI  P +++      +G +  ++ +++ V+ +  T
Sbjct: 170 --GALLERAVYSFMLDLHTQKQGYHEIIPPYLVNAQTMYGTGQFPKFKEDVYTVESSGMT 227

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVR 384
           +         P         + + + S  +LP         YR+E   +     GL+R+ 
Sbjct: 228 LI--------PTAEVPLTNYYANEILSEDQLPTYFTAMTPCYRSEAGSAGRDTRGLIRMH 279

Query: 385 GFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDAL 440
            F + +   +C  E  ++E  K+ +    +  + G    ++KLST              +
Sbjct: 280 QFHKVEMVKYCKPENSYDELEKLTDNAEEVLHELGLAYHVIKLSTGDTGFSSAKTYDVEV 339

Query: 441 W 441
           W
Sbjct: 340 W 340


>gi|58038523|ref|YP_190487.1| histidyl-tRNA synthetase [Gluconobacter oxydans 621H]
 gi|81672761|sp|Q5FUR8|SYH_GLUOX RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|58000937|gb|AAW59831.1| Histidyl-tRNA synthetase [Gluconobacter oxydans 621H]
          Length = 415

 Score = 63.6 bits (153), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 62/427 (14%), Positives = 139/427 (32%), Gaps = 76/427 (17%)

Query: 270 RKGWKIFQTLISYMRRKIK-----------DDYEEINTPQVLDQHLWQQSGHWDSYRANM 318
            +G      +   MRR                +EE +TP   D  ++ ++       +++
Sbjct: 7   PRGTH--DLIGETMRRHHHVVETARRVLRTYGFEEWSTPIFEDTRVFSRT---LGETSDV 61

Query: 319 FAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS--YRELPVRLAEFGSVYRNEPSGS 376
            + +      +   +  L+P    G  A+    + +   + LP ++   GS++R E    
Sbjct: 62  VSKEMYTFEDRGGESITLRP---EGTAAICRALVTNGLTQSLPQKVFYHGSMFRYERPQK 118

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI------------- 423
                R R F Q  A +   +  + +   +   +   I ++ G                 
Sbjct: 119 ----GRYRQFHQIGAELIGAESPLRDA--ETIAMAQDILRELGLGDHVTLELNTLGDLAS 172

Query: 424 --MVKLSTRPEKRVGSDALWDDAENIMKG----VLDTIKNSSQDRIN-------TGVLLG 470
               + +     R  +DAL +++   ++     +LD+     +  ++             
Sbjct: 173 RQAWREALVAYFRDHADALSEESRVRLEANPLRILDSKSEQDRKLLDAAPAFADYLNDDS 232

Query: 471 EGAFYGPKFEYIL--KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS------------- 515
              + G +        D +        +    +    F    + +               
Sbjct: 233 RQFWDGLRSSLQAFGVDFVENPRIVRGLDYYSHTAFEFVTSKLGAQGTVLAGGRYEGLVE 292

Query: 516 EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLL 575
           +   P +      G IER + +++++          P    +  +   AV  A  IA +L
Sbjct: 293 QMGGPAIPAIGWAGGIER-LAMLLDSVPE------LPAGIALVPMGDEAVLKAASIARVL 345

Query: 576 KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
           +S  L  E + R   +  ++           I+ GD+E ++  + +R   S   Q+V + 
Sbjct: 346 RSAGLRAEIETRGN-MKKRMERVVKSGASHAIVLGDEEIAKNIVQLRDLSSREQQEVPVA 404

Query: 636 DAIPILT 642
           D   IL+
Sbjct: 405 DLARILS 411


>gi|329122821|ref|ZP_08251393.1| alanine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
 gi|327472085|gb|EGF17523.1| alanine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
          Length = 874

 Score = 63.6 bits (153), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 29/148 (19%), Positives = 60/148 (40%), Gaps = 10/148 (6%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSS 116
           S+  I     R    + HS  H++  A++ I     V  G ++ D    +DF + +  + 
Sbjct: 546 SVNAIVDAKRRHNTSLNHSATHLLHAALRQILGLHVVQKGSLVSDKALRFDFAQPEAITK 605

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
           ++L++IE  + + I  + P     +  + A+          K          + V +   
Sbjct: 606 EQLSEIETLVNQKIRANFPVQTDIMDIDSAKAKGAMALFGEKY--------GDKVRVLTM 657

Query: 177 GEW-FDLCRGPHVRSTGQVKKFFKLMKV 203
           G++  +LC G H + TG +  F  + + 
Sbjct: 658 GDFSIELCGGIHAKRTGDIGLFKIITEN 685


>gi|319775253|ref|YP_004137741.1| alanyl-tRNA synthetase [Haemophilus influenzae F3047]
 gi|317449844|emb|CBY86053.1| alanyl-tRNA synthetase [Haemophilus influenzae F3047]
          Length = 874

 Score = 63.6 bits (153), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 29/148 (19%), Positives = 60/148 (40%), Gaps = 10/148 (6%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSS 116
           S+  I     R    + HS  H++  A++ I     V  G ++ D    +DF + +  + 
Sbjct: 546 SVNAIVDAKRRHNTSLNHSATHLLHAALRQILGLHVVQKGSLVSDKALRFDFAQPEAITK 605

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
           ++L++IE  + + I  + P     +  + A+          K          + V +   
Sbjct: 606 EQLSEIETLVNQKIRANFPVQTDIMDIDSAKAKGAMALFGEKY--------GDKVRVLTM 657

Query: 177 GEW-FDLCRGPHVRSTGQVKKFFKLMKV 203
           G++  +LC G H + TG +  F  + + 
Sbjct: 658 GDFSIELCGGIHAKRTGDIGLFKIITEN 685


>gi|260579906|ref|ZP_05847736.1| alanyl-tRNA synthetase [Haemophilus influenzae RdAW]
 gi|260093190|gb|EEW77123.1| alanyl-tRNA synthetase [Haemophilus influenzae RdAW]
          Length = 874

 Score = 63.6 bits (153), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 29/148 (19%), Positives = 60/148 (40%), Gaps = 10/148 (6%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSS 116
           S+  I     R    + HS  H++  A++ I     V  G ++ D    +DF + +  + 
Sbjct: 546 SVNAIVDAKRRHNTSLNHSATHLLHAALRQILGLHVVQKGSLVSDKALRFDFAQPEAITK 605

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
           ++L++IE  + + I  + P     +  + A+          K          + V +   
Sbjct: 606 EQLSEIETLVNQKIRANFPVQTDIMDIDSAKAKGAMALFGEKY--------GDKVRVLTM 657

Query: 177 GEW-FDLCRGPHVRSTGQVKKFFKLMKV 203
           G++  +LC G H + TG +  F  + + 
Sbjct: 658 GDFSIELCGGIHAKRTGDIGLFKIITEN 685


>gi|148828002|ref|YP_001292755.1| alanyl-tRNA synthetase [Haemophilus influenzae PittGG]
 gi|205830061|sp|A5UHW6|SYA_HAEIG RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|148719244|gb|ABR00372.1| alanyl-tRNA synthetase [Haemophilus influenzae PittGG]
          Length = 874

 Score = 63.6 bits (153), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 29/148 (19%), Positives = 60/148 (40%), Gaps = 10/148 (6%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSS 116
           S+  I     R    + HS  H++  A++ I     V  G ++ D    +DF + +  + 
Sbjct: 546 SVNAIVDAKRRHNTSLNHSATHLLHAALRQILGLHVVQKGSLVSDKALRFDFAQPEAITK 605

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
           ++L++IE  + + I  + P     +  + A+          K          + V +   
Sbjct: 606 EQLSEIETLVNQKIRANFPVQTDIMDIDSAKAKGAMALFGEKY--------GDKVRVLTM 657

Query: 177 GEW-FDLCRGPHVRSTGQVKKFFKLMKV 203
           G++  +LC G H + TG +  F  + + 
Sbjct: 658 GDFSIELCGGIHAKRTGDIGLFKIITEN 685


>gi|68249409|ref|YP_248521.1| alanyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
 gi|81336165|sp|Q4QM86|SYA_HAEI8 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|68057608|gb|AAX87861.1| alanyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
          Length = 874

 Score = 63.6 bits (153), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 29/148 (19%), Positives = 60/148 (40%), Gaps = 10/148 (6%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSS 116
           S+  I     R    + HS  H++  A++ I     V  G ++ D    +DF + +  + 
Sbjct: 546 SVNAIVDAKRRHNTSLNHSATHLLHAALRQILGLHVVQKGSLVSDKALRFDFAQPEAITK 605

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
           ++L++IE  + + I  + P     +  + A+          K          + V +   
Sbjct: 606 EQLSEIETLVNQKIRANFPVQTDIMDIDSAKAKGAMALFGEKY--------GDKVRVLTM 657

Query: 177 GEW-FDLCRGPHVRSTGQVKKFFKLMKV 203
           G++  +LC G H + TG +  F  + + 
Sbjct: 658 GDFSIELCGGIHAKRTGDIGLFKIITEN 685


>gi|16272755|ref|NP_438974.1| alanyl-tRNA synthetase [Haemophilus influenzae Rd KW20]
 gi|1174496|sp|P43815|SYA_HAEIN RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|1573826|gb|AAC22473.1| alanyl-tRNA synthetase (alaS) [Haemophilus influenzae Rd KW20]
          Length = 874

 Score = 63.6 bits (153), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 29/148 (19%), Positives = 60/148 (40%), Gaps = 10/148 (6%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSS 116
           S+  I     R    + HS  H++  A++ I     V  G ++ D    +DF + +  + 
Sbjct: 546 SVNAIVDAKRRHNTSLNHSATHLLHAALRQILGLHVVQKGSLVSDKALRFDFAQPEAITK 605

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
           ++L++IE  + + I  + P     +  + A+          K          + V +   
Sbjct: 606 EQLSEIETLVNQKIRANFPVQTDIMDIDSAKAKGAMALFGEKY--------GDKVRVLTM 657

Query: 177 GEW-FDLCRGPHVRSTGQVKKFFKLMKV 203
           G++  +LC G H + TG +  F  + + 
Sbjct: 658 GDFSIELCGGIHAKRTGDIGLFKIITEN 685


>gi|309973694|gb|ADO96895.1| Alanyl-tRNA synthetase [Haemophilus influenzae R2846]
          Length = 874

 Score = 63.6 bits (153), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 29/148 (19%), Positives = 60/148 (40%), Gaps = 10/148 (6%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSS 116
           S+  I     R    + HS  H++  A++ I     V  G ++ D    +DF + +  + 
Sbjct: 546 SVNAIVDAKRRHNTSLNHSATHLLHAALRQILGLHVVQKGSLVSDKVLRFDFAQPEAITK 605

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
           ++L++IE  + + I  + P     +  + A+          K          + V +   
Sbjct: 606 EQLSEIETLVNQKIRANFPVQTDIMDIDSAKAKGAMALFGEKY--------GDKVRVLTM 657

Query: 177 GEW-FDLCRGPHVRSTGQVKKFFKLMKV 203
           G++  +LC G H + TG +  F  + + 
Sbjct: 658 GDFSIELCGGIHAKRTGDIGLFKIITEN 685


>gi|313888208|ref|ZP_07821882.1| alanine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
 gi|312845898|gb|EFR33285.1| alanine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
          Length = 870

 Score = 63.6 bits (153), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 63/146 (43%), Gaps = 10/146 (6%)

Query: 54  VREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQ 112
           + +  ++ I     R+     HS  H++  A++ +        G  ++ D   +DF    
Sbjct: 541 LEKAPVKAIIDSKRRNNIRRNHSVTHLLHRALKDVLGSHVNQAGSLVMADRMRFDFSHFD 600

Query: 113 PFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVT 172
             + +E+A++E+++ E I    P   +    E+A+E+        K +        + V 
Sbjct: 601 AMTKEEIAEVERRVNEKIFEGLPVETKVTGLEEAKEMGAIGLFEGKYQ--------DQVR 652

Query: 173 LYRQGEWF-DLCRGPHVRSTGQVKKF 197
           +   G++  +LC G HV +T ++  F
Sbjct: 653 VLSMGDYSRELCGGTHVSNTSEISMF 678


>gi|315303256|ref|ZP_07873900.1| alanyl-tRNA synthetase [Listeria ivanovii FSL F6-596]
 gi|313628368|gb|EFR96857.1| alanyl-tRNA synthetase [Listeria ivanovii FSL F6-596]
          Length = 879

 Score = 63.6 bits (153), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 61/143 (42%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFS 115
            ++++   +  R   V  H+  H++  A++    E     G ++  D   +DF      +
Sbjct: 548 DTVKLSVDKVKRRETVKNHTATHLLHRALKDTLGEHVNQAGSLVSPDRLRFDFSHFGQIT 607

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            +EL ++EK + E I      + + +   +A+EL        K          + V + +
Sbjct: 608 EEELTKMEKIVNEKIWEQIAVVIEEMPIAEAKELGAMALFGEKY--------GDIVRVVQ 659

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G++  +LC G HVR+T  +  F
Sbjct: 660 VGKYSIELCGGVHVRNTADIGLF 682


>gi|254786029|ref|YP_003073458.1| seryl-tRNA synthetase [Teredinibacter turnerae T7901]
 gi|259516191|sp|C5BIK4|SYS_TERTT RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|237685707|gb|ACR12971.1| serine--tRNA ligase [Teredinibacter turnerae T7901]
          Length = 426

 Score = 63.6 bits (153), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 65/188 (34%), Gaps = 16/188 (8%)

Query: 273 WKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + LI +M      +  Y+EI  P ++++     +G    +  ++F +       +D
Sbjct: 170 ARLHRALIQFMLNTHTGEHGYDEIYVPYIVNKDSLYGTGQLPKFEEDLFKL-------RD 222

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
            R F L P        +    +   ++LPVR A     +R+E         G++R   F 
Sbjct: 223 DRDFYLIPTAEVPVTNMMRDEIIDEKQLPVRFACHTPCFRSEAGSYGRDTRGMIRQHQFE 282

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +   F    +       +     +I +        V L                +W  
Sbjct: 283 KVELVQFVKPGESMAALESLVGHAETILQKLSLPYRKVILCGGDTGFSSTKTYDLEVWLP 342

Query: 444 AENIMKGV 451
           ++N  + +
Sbjct: 343 SQNTYREI 350


>gi|150024186|ref|YP_001295012.1| seryl-tRNA synthetase [Flavobacterium psychrophilum JIP02/86]
 gi|149770727|emb|CAL42191.1| Serine--tRNA ligase [Flavobacterium psychrophilum JIP02/86]
          Length = 423

 Score = 63.6 bits (153), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 68/203 (33%), Gaps = 16/203 (7%)

Query: 240 ESEKRDHRKLAREMDLFHIA----EDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEI 294
             E + H +L ++ D+            G   +  KG K+ + LISY + +     Y+E 
Sbjct: 137 HEEAQPHWELIKKYDIVDFELGTKITAPGFPVYKGKGAKLQRALISYFLDKNTDAGYQEY 196

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
             P ++++          +Y       K             L P        +F   + +
Sbjct: 197 QVPHMVNE--------ASAYGTGQLPDKEGQMYHDAKDNLYLIPTAEVPVTNIFRDVILN 248

Query: 355 YRELPVRLAEFGSVYRNEPSG---SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI 411
             ELPV    +   +R E       + GL R+  F + +       ++ +     +   +
Sbjct: 249 ENELPVLCTGYTPCFRREAGSWGAHVRGLNRLHQFDKVEIVRIEHPDKSYEALEGMVEHV 308

Query: 412 ISIYKDFGFEKIMVKLSTRPEKR 434
            SI ++      +++L       
Sbjct: 309 KSILQELKLPYRILRLCGGDMGF 331


>gi|311280197|ref|YP_003942428.1| seryl-tRNA synthetase [Enterobacter cloacae SCF1]
 gi|308749392|gb|ADO49144.1| seryl-tRNA synthetase [Enterobacter cloacae SCF1]
          Length = 430

 Score = 63.6 bits (153), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 64/188 (34%), Gaps = 10/188 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
             + + L  +M     +   Y E   P +++      +G    +  ++F  +  ++   D
Sbjct: 170 AHLHRALAQFMLDLHTEQHGYSETYVPYLVNHDTLYGTGQLPKFAGDLFHTRPLEEEA-D 228

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
              +AL P        +    +    +LP++L      +R+E         GL+R+  F 
Sbjct: 229 SSNYALIPTAEVPLTNLVRDEILDEDDLPIKLTAHSPCFRSEAGSYGRDTRGLIRMHQFD 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E   +   ++ +    + +  G     V L T              +W  
Sbjct: 289 KVEMVQIVRPEDSMDALEEMTSHAEKVLELLGLPYRRVALCTGDMGFGACKTFDLEVWVP 348

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 349 AQNTYREI 356


>gi|288554619|ref|YP_003426554.1| seryl-tRNA synthetase [Bacillus pseudofirmus OF4]
 gi|288545779|gb|ADC49662.1| seryl-tRNA synthetase [Bacillus pseudofirmus OF4]
          Length = 424

 Score = 63.6 bits (153), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 32/223 (14%), Positives = 80/223 (35%), Gaps = 21/223 (9%)

Query: 242 EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRR--KIKDDYEEIN 295
           E + H  LA ++ +          GS  +F+   G ++ + L+++M    + +  YEE+ 
Sbjct: 136 EPKPHWDLATDLGILDFERASKVTGSRFVFYKGLGARLERALMNFMMDLHQDEHGYEEVL 195

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
            P ++++     +G    +  + F ++           + L P        +    +   
Sbjct: 196 PPYMVNRTSMTGTGQLPKFEEDAFKIR--------EEDYFLIPTAEVPVTNMHRDEILQA 247

Query: 356 RELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
            +LP+    F + +R+E   +     GL+R   F + +   F   E  + E   +     
Sbjct: 248 DQLPIAYTAFSACFRSEAGSAGRDTRGLIRQHQFNKVELVRFVKPEDSYQELENLTGHAE 307

Query: 413 SIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENIMKGV 451
            + +       ++ + T              +W  + +  + +
Sbjct: 308 KVLQLLELPYRVMSMCTADLGFTAAKKYDIEVWIPSYDSYREI 350


>gi|228473450|ref|ZP_04058203.1| serine--tRNA ligase [Capnocytophaga gingivalis ATCC 33624]
 gi|228275057|gb|EEK13860.1| serine--tRNA ligase [Capnocytophaga gingivalis ATCC 33624]
          Length = 423

 Score = 63.6 bits (153), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 71/214 (33%), Gaps = 20/214 (9%)

Query: 245 DHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQV 299
            H +LA++ D+          G+G   +  KG K+ + LISY + +     Y+E   P +
Sbjct: 142 PHWELAKKYDIIDFELGVKLTGAGFPVYKGKGAKLQRALISYFLDKNTAAGYQEFQVPHM 201

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           +++           Y       K        L    L P        +F   + S  + P
Sbjct: 202 VNEDS--------GYGTGQLPDKEGQMYHVQLDNLYLIPTAEVPVTNIFRDVILSEADFP 253

Query: 360 VRLAEFGSVYRNEPSG---SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +    +   +R E       + GL R+  F + +       ++ +    ++   +  I  
Sbjct: 254 ICCTAYTPCFRREAGSYGAHVRGLNRLHQFDKVEIVRIEHPDRSYQALTQMVEHVKGILN 313

Query: 417 DFGFEKIMVKLSTRPEKR----VGSDALWDDAEN 446
           +      +++L                ++  A+ 
Sbjct: 314 ELKLPYRILRLCGGDLGFTSAITYDFEVYSTAQE 347


>gi|71066173|ref|YP_264900.1| seryl-tRNA synthetase [Psychrobacter arcticus 273-4]
 gi|123648178|sp|Q4FR92|SYS_PSYA2 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|71039158|gb|AAZ19466.1| seryl-tRNA synthetase [Psychrobacter arcticus 273-4]
          Length = 427

 Score = 63.6 bits (153), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 42/223 (18%), Positives = 75/223 (33%), Gaps = 15/223 (6%)

Query: 242 EKRDHRKLAREMDL--FHIAEDGSGVIFWHRKG--WKIFQTLISYM--RRKIKDDYEEIN 295
           E +DH  +   + +  F  A   +G  F   KG   ++ + LI +M     IK  Y E  
Sbjct: 135 EIKDHAHIGETLGMLDFEAAAKLTGSRFNVLKGQLAQMHRALIQFMLNTHTIKYGYTETY 194

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
            P +++    + +G    +       K  + T  D   F L P        +        
Sbjct: 195 VPYIVNSESLKGTGQLPKF--EGDLFKLINHTNNDDMDFYLIPTAEVPMTNLVRGERLDI 252

Query: 356 RELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
           +ELP++       +R+E         GL+R   F + +     T EQ       +     
Sbjct: 253 KELPLKFTAHTPCFRSEAGSHGRDTRGLIRQHQFEKVEMVNIATAEQSDELLEAMTGQAE 312

Query: 413 SIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENIMKGV 451
            I +        VKL T              +W  +++  + +
Sbjct: 313 FILQQLNLPYRTVKLCTGDMGFAAQKTYDIEVWLPSQDTYREI 355


>gi|15679834|ref|NP_276952.1| glycyl-tRNA synthetase [Methanothermobacter thermautotrophicus str.
           Delta H]
 gi|3334352|sp|O27874|SYG_METTH RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|2622981|gb|AAB86312.1| glycyl-tRNA synthetase [Methanothermobacter thermautotrophicus str.
           Delta H]
          Length = 565

 Score = 63.6 bits (153), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 27/148 (18%), Positives = 51/148 (34%), Gaps = 13/148 (8%)

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI--------ENFKGNLPLWLSPIQAIV 557
           F          K +P +I       I+R I  ++        E     LP  ++P++  V
Sbjct: 418 FEDVEEVVTGRKVYPHVI--EPSFGIDRIIYTLLLHSLVDDGERTYFRLPPHVAPVEVTV 475

Query: 558 TTIT--SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEAS 615
             +      V  A EI   L+      E D    TI  +        +P  +    +   
Sbjct: 476 LPLVNREEMVMTALEIERNLRRSGFIAEFDSSG-TIGRRYARADEIGVPFAVTVDHETLE 534

Query: 616 ERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           + ++ +R     +  +V + + +P L K
Sbjct: 535 DGTVTLRNRDDCSQVRVKIEELVPTLEK 562



 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/203 (19%), Positives = 68/203 (33%), Gaps = 60/203 (29%)

Query: 256 FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDS 313
           F I    +G + +   G  +   +++  R     ++ + EI +P ++ +   + SGH D 
Sbjct: 23  FEIYSGVAGFVDYGPLGATLKNKIMNRWREFYVVREGFYEIESPTIMPEEALKASGHVDH 82

Query: 314 YRANMFAVKC-----------ADDTIKDLRTF---------------------------- 334
           +   M   K             D T +D+                               
Sbjct: 83  FNDPMTQCKECMDVYRADHIIEDATGRDVEGLENQELTEIISDEGIRCPRCGGHLTHVWS 142

Query: 335 -----------------ALKPMNCPGHVAVFNHGLKSYRE-LPVRLAEFGSVYRNEPSGS 376
                             L+P    G    F   L+ +R  LP  + + G  YRNE S  
Sbjct: 143 YNLMFQTLIGARGKKTGYLRPETAQGIFIPFKRLLRFFRNRLPFGVVQLGKSYRNEISPR 202

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQ 399
             G++R+R FTQ +A +F   E 
Sbjct: 203 -QGVIRLREFTQAEAEIFVDPEH 224


>gi|295688603|ref|YP_003592296.1| alanyl-tRNA synthetase [Caulobacter segnis ATCC 21756]
 gi|295430506|gb|ADG09678.1| alanyl-tRNA synthetase [Caulobacter segnis ATCC 21756]
          Length = 880

 Score = 63.6 bits (153), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 35/165 (21%), Positives = 71/165 (43%), Gaps = 17/165 (10%)

Query: 45  GKV----CDLSDPVREGSIEIITPE-DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPI 99
           G++     +LS  ++ G   +++ + D R      HS AH++  A+  +        G +
Sbjct: 528 GELHVHRVELSGELKVGDKVVVSVDADRRQTTRSNHSAAHLVHAALHHVLGPHVAQKGQM 587

Query: 100 IEDG-FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE------LFES 152
           ++     +DF    P + +EL +IE ++  +I ++ P   + ++ ++A E        E 
Sbjct: 588 VDGERMRFDFSHGGPLTPEELDKIEAEVNAVIRQNVPAETKEMAPQEAIEAGAVALFGEK 647

Query: 153 KKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
             ++ +V  L      E+          +LC G HV  TG +  F
Sbjct: 648 YGDSVRVLTLGKSLTDESKAY-----SVELCGGTHVSRTGDIALF 687


>gi|229495393|ref|ZP_04389128.1| seryl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406]
 gi|229317836|gb|EEN83734.1| seryl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406]
          Length = 423

 Score = 63.6 bits (153), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 35/233 (15%), Positives = 80/233 (34%), Gaps = 16/233 (6%)

Query: 210 GDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIA----EDGSGV 265
            +     +    G   N   +    +  L +  K  H  LA++ DL          G+G 
Sbjct: 108 PNMPHESVPEGKGAEDNVCIKTGGTMPQLSQDNKLPHWDLAKKYDLIDFELGVKISGAGF 167

Query: 266 IFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCA 324
             +  +G ++ + LI+Y + + I   ++E+  P V++            Y       K  
Sbjct: 168 PVYKGRGARLQRALINYFLDKAIAAGFQEVEPPYVVNGDS--------GYGTGQLPDKEG 219

Query: 325 DDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLM 381
                      L P        ++   +    +LP++   + + +R E       + GL 
Sbjct: 220 QMYFAPADNLYLIPTAEVPVTNMYRDVILEESQLPIKNVAYSACFRREAGSYGKDVRGLN 279

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
           R+  F + +     T E+ +     + + +  + ++ G    +++L       
Sbjct: 280 RLHQFNKVEIVCIDTPERSYATLDSMVSYVQGLVEELGLPWRILRLCGGDISF 332


>gi|158424478|ref|YP_001525770.1| alanyl-tRNA synthetase [Azorhizobium caulinodans ORS 571]
 gi|205829980|sp|A8ICW8|SYA_AZOC5 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|158331367|dbj|BAF88852.1| alanyl-tRNA synthetase [Azorhizobium caulinodans ORS 571]
          Length = 881

 Score = 63.6 bits (153), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 36/147 (24%), Positives = 63/147 (42%), Gaps = 7/147 (4%)

Query: 53  PVREGSIEIITP-----EDPRSLAVI-RHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFY 105
            V EG+++I TP     +  R  AV   HS  H++ EA++ +  +     G  +  D   
Sbjct: 535 EVTEGTLKIGTPLALEVDHARRSAVRANHSATHLLHEALRRVLGDHVAQKGSLVAPDRLR 594

Query: 106 YDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESI 165
           +DF   +P ++DELAQ+E      + R+ P   + ++ + A           K      +
Sbjct: 595 FDFSHPKPLTADELAQVEDIANTYVLRNEPVETRLMAVDDAVASGARALFGEKYGDEVRV 654

Query: 166 PAKENVTLYRQGEWFDLCRGPHVRSTG 192
            +    +        +LC G HV+ TG
Sbjct: 655 VSMGTDSGNGAPFSVELCGGTHVKRTG 681


>gi|329667903|gb|AEB93851.1| seryl-tRNA synthetase [Lactobacillus johnsonii DPC 6026]
          Length = 436

 Score = 63.6 bits (153), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 76/188 (40%), Gaps = 9/188 (4%)

Query: 272 GWKIFQTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G  + + + ++ +    KD Y E+  P +++    Q +G +  +  +++ +   DD  K 
Sbjct: 170 GALLERAVSNFFLDENTKDGYTEVIPPYLVNDASMQGTGQFPKFTEDVYTIVDNDDPDKP 229

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFT 387
            R   L P      V  F   +    +LP+ +  F   +R+E   +     GL+R+  F 
Sbjct: 230 -RDLTLIPTAEVPLVNYFRGKILDGEQLPINVTAFSPAFRSEAGSAGRDTRGLIRMHEFR 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +      +E  ++E  K+ +    + +  G    +V LST              +W  
Sbjct: 289 KVEMVKIVDEESSWDELEKLTHNAEHLLQKLGLPYHVVALSTGDASFTSAKTYDLEVWMP 348

Query: 444 AENIMKGV 451
           A++  + +
Sbjct: 349 AQDKYREI 356


>gi|90412109|ref|ZP_01220116.1| alanyl-tRNA synthetase [Photobacterium profundum 3TCK]
 gi|90327087|gb|EAS43466.1| alanyl-tRNA synthetase [Photobacterium profundum 3TCK]
          Length = 873

 Score = 63.6 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 59/143 (41%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFS 115
             +E       R+   + HS  H++  A++++  E     G +++ D   +DF   +   
Sbjct: 544 DKLEAQVDVARRAAITLNHSATHLLHSALRNLLGEHVAQKGSLVKADALRFDFSNLEAVK 603

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            ++L +IE+ + E I  +       +  E A++         K          + V +  
Sbjct: 604 PEQLREIERVVNEQIRLNHSIDTNIMDIESAKQKGAMALFGEKY--------DDEVRVLS 655

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            GE+  +LC G H ++TG +  F
Sbjct: 656 MGEFSTELCGGIHAKNTGDIGLF 678


>gi|261820431|ref|YP_003258537.1| alanyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
 gi|261604444|gb|ACX86930.1| alanyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
          Length = 875

 Score = 63.6 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/151 (16%), Positives = 57/151 (37%), Gaps = 10/151 (6%)

Query: 56  EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGF-YYDFDKEQPF 114
             S++       R    + HS  H++  A++ +  +     G ++ D +  +DF   +  
Sbjct: 545 NDSVDANVDSQRRDRIRLNHSATHLLHAALRQVLGDHVAQKGSLVNDSYLRFDFSHTEAM 604

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
             +++  +E  +   I R+       ++ + AR          K          ++V + 
Sbjct: 605 KPEQIRLVEDIVNAQIRRNLTVQTDVMALDDARAKGAMALFGEKY--------DDHVRVL 656

Query: 175 RQGEW-FDLCRGPHVRSTGQVKKFFKLMKVA 204
             G++  +LC G H   TG +  F  + +  
Sbjct: 657 TMGDFSIELCGGTHANRTGDIGLFQIISESG 687


>gi|317133026|ref|YP_004092340.1| alanyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
 gi|315471005|gb|ADU27609.1| alanyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
          Length = 874

 Score = 63.6 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/137 (27%), Positives = 67/137 (48%), Gaps = 11/137 (8%)

Query: 65  EDPRSLAVIR-HSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSDELAQI 122
           + PR  AV+R HS AH++  A++S+        G ++ D    +DF      ++DELA +
Sbjct: 550 DAPRRRAVMRNHSAAHLLQAALRSVLGTHVQQAGQLVNDRHVRFDFTHFAALTADELAAV 609

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE-WFD 181
           EK++   I    P + + ++ E+A++             L S    + V + + G+   +
Sbjct: 610 EKEVNTAILSALPVVTRTMAVEEAKK--------TGAMALFSEKYGDVVRVVQMGDVSKE 661

Query: 182 LCRGPHVRSTGQVKKFF 198
           LC G HV +TG++  F 
Sbjct: 662 LCGGTHVDNTGKIGLFR 678


>gi|110639970|ref|YP_680180.1| seryl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406]
 gi|110282651|gb|ABG60837.1| seryl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406]
          Length = 423

 Score = 63.6 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/203 (14%), Positives = 70/203 (34%), Gaps = 16/203 (7%)

Query: 240 ESEKRDHRKLAREMDLFHIA----EDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEI 294
            ++ + H +L ++ D+          G+G   +  KG ++ + LI++ +    K  Y E+
Sbjct: 138 HADAQPHWELIKKYDIIDFDLGNKITGAGFPVYKNKGARLQRALINFFLDEAGKSGYTEV 197

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
             P ++++          +Y       K           F L P        ++   +  
Sbjct: 198 QPPIMVNE--------ASAYATGQLPDKDGQMYYASEDKFYLIPTAEVPITNMYRDMIIK 249

Query: 355 YRELPVRLAEFGSVYRNEPSG---SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI 411
             +LP++   +   +R E       + GL R+  F + +     T E  +    ++   +
Sbjct: 250 EEDLPIKNTGYTPCFRREAGSWGADVRGLNRLHQFDKVELVQIATPETSYAILEEMKKHV 309

Query: 412 ISIYKDFGFEKIMVKLSTRPEKR 434
             + +       ++ L       
Sbjct: 310 QGLLEKLELPYRILHLCGGDMSF 332


>gi|315638099|ref|ZP_07893284.1| alanine--tRNA ligase [Campylobacter upsaliensis JV21]
 gi|315481947|gb|EFU72566.1| alanine--tRNA ligase [Campylobacter upsaliensis JV21]
          Length = 844

 Score = 63.6 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/142 (23%), Positives = 63/142 (44%), Gaps = 9/142 (6%)

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQI 122
            E  R      HS  H++  A++ I        G ++E +   +DF+  +  + +EL +I
Sbjct: 540 DEGKREQIARHHSATHLLHYALRKILGAHIAQAGSLVEFNKLRFDFNHPKALTKEELEKI 599

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E  + E+I+   P L + +S + A++       + K E          V +   GE  +L
Sbjct: 600 ENLVNEMISSSYPALLEEMSLDDAKKSGAIALFSEKYEN--------KVRVLSLGESKEL 651

Query: 183 CRGPHVRSTGQVKKFFKLMKVA 204
           C G HV ++ ++  FF L +  
Sbjct: 652 CGGTHVNNSAEIGSFFILKESG 673


>gi|269959126|ref|YP_003328915.1| histidyl-tRNA synthetase [Anaplasma centrale str. Israel]
 gi|269848957|gb|ACZ49601.1| histidyl-tRNA synthetase [Anaplasma centrale str. Israel]
          Length = 430

 Score = 63.6 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 71/423 (16%), Positives = 129/423 (30%), Gaps = 97/423 (22%)

Query: 267 FWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHLWQQS--GHWDSYRANMFAVKCA 324
           FW+       + +   M  +    +  + TP    Q ++ ++     D     M++    
Sbjct: 23  FWY------IRDIAHSMGERY--GFVPVETPIFEFQDVFLKTLGDSSDIIGKEMYSFPDR 74

Query: 325 DDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR-ELPVRLAEFGSVYRNEPSGSLHGLMRV 383
              +  LR         P   A     L   R  LP RL  FG V+R E         R 
Sbjct: 75  GGDVLVLR---------PELTAAVARMLICERLALPARLFTFGPVFRYERPQKC----RQ 121

Query: 384 RGFTQDDAHVF---CTKEQMFNE-------CLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
           R F Q +   F   CT +             L + N +       G +  ++K  +   +
Sbjct: 122 RQFHQINYEHFGAGCTADAELMALAYDILGALNLRNKVHLEINSLGSQDSILKYKSSLLQ 181

Query: 434 RV----------------------------GS-----------DALWDDAENIMKGVLDT 454
                                         G            D   D+++    GV+  
Sbjct: 182 YFSEHEHALSGDSRRRVHTNPLRILDSKDRGDMAILCNAPVVADFYDDESKMAFDGVVRQ 241

Query: 455 IKNSS-QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNS 513
           + N      +N  ++ G   + G  FE+           C   Q       R++    + 
Sbjct: 242 LDNLGIPHTVNPRLVRGLDYYCGVVFEFKT--------TCLGAQDAVIAGGRYDKLVASM 293

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIAN 573
             +    V       G +ER +  +++   G               +   AVE A   A 
Sbjct: 294 GGDNVPAV----GFAGGMER-LASLVDYSHGTGFS------VAFLPLGEGAVECAMRSAY 342

Query: 574 LLKSHHLSIETDFRNETINYKI--REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
            L+S  + +  D   E +  KI  +      + + +I GD+E ++  +  R   +   + 
Sbjct: 343 ELRSRGIRVLCDGAVEKL--KIGLKHADRSGVDLALILGDEEIAKGEVLCRHMATGAQET 400

Query: 632 VSL 634
           VS+
Sbjct: 401 VSI 403


>gi|297623943|ref|YP_003705377.1| seryl-tRNA synthetase [Truepera radiovictrix DSM 17093]
 gi|297165123|gb|ADI14834.1| seryl-tRNA synthetase [Truepera radiovictrix DSM 17093]
          Length = 426

 Score = 63.6 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 40/296 (13%), Positives = 86/296 (29%), Gaps = 57/296 (19%)

Query: 272 GWKIFQTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G ++ + L +Y +   +   Y E+  P +++      +G        M+ ++        
Sbjct: 172 GARLLRALNTYCLNALVAAGYTEVAVPLLVNAESATATGQLPDKEGQMYELRDG------ 225

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG---SLHGLMRVRGFT 387
              F L P +      +    +    ELP+R A     +R E       + G+ RV  F 
Sbjct: 226 ---FYLIPTSELALTNLHRGEILDAAELPLRYAAQTPCFRREAGSYGAHVRGVNRVHQFD 282

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENI 447
           + +   F   ++ F    ++     S+ +  G          R     G           
Sbjct: 283 KVEMVQFTHPDRSFEALEEMAAFAESLLETLGMPY------RRLLMCTGD---------- 326

Query: 448 MKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFN 507
                  +  +   + +  V                    GR  +  ++    +  +R  
Sbjct: 327 -------MGFTQAKKYDLEVWSAG---------------QGRWLEVSSVSNITDFQARRL 364

Query: 508 AFYVNSHSEKCH--PVMIHR--AVFGSIERFIGIMIEN--FKGNLPLWLSPIQAIV 557
                    +    P ++H        + R    ++EN   +        P+Q  V
Sbjct: 365 GTRFREGGAQGRGKPELVHTLNGSAFGMVRLFAALLENAQHEDGTVSVPEPLQPYV 420


>gi|283954216|ref|ZP_06371740.1| alanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414]
 gi|283794234|gb|EFC32979.1| alanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414]
          Length = 842

 Score = 63.6 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/142 (23%), Positives = 63/142 (44%), Gaps = 9/142 (6%)

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQI 122
             + R      HS  H++  A++ I        G ++E +   +DF   +  S +EL  I
Sbjct: 538 DTEKREQIARHHSATHLLHHALREILGSHVSQAGSLVESNKLRFDFTHHKALSKEELESI 597

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK++ E+I   S  + + +  E+A++         K +         NV +   GE  +L
Sbjct: 598 EKRVNEMIINSSEAILENMPLEEAKKSGAIALFNEKYQ--------GNVRVLTLGESKEL 649

Query: 183 CRGPHVRSTGQVKKFFKLMKVA 204
           C G HV++T Q+  F+ + +  
Sbjct: 650 CGGTHVKNTAQIGSFYIIKESG 671


>gi|226291392|gb|EEH46820.1| prolyl-tRNA synthetase [Paracoccidioides brasiliensis Pb18]
          Length = 583

 Score = 63.6 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 52/126 (41%), Gaps = 10/126 (7%)

Query: 520 PVMIHRAVFGSIERFIGI----MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLL 575
           P+ +     G   R I      + +    N P  +SP   I+ +      E A+++ + L
Sbjct: 449 PLEMGCHGIGVS-RMIAAVADTLADPKGLNWPRVISPFDVIIISDRELEKE-AEQVYDTL 506

Query: 576 ---KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR-RFGSTTTQK 631
              +   +    D R +++ +K+R+  +   P+II+ G     +  + I+ R      + 
Sbjct: 507 MESRKADVDAIIDDREKSLTWKLRDADLIGYPVIIVIGKLWKRDSKLEIQCRRLENFRET 566

Query: 632 VSLLDA 637
           VSL D 
Sbjct: 567 VSLQDL 572



 Score = 39.4 bits (90), Expect = 1.9,   Method: Composition-based stats.
 Identities = 15/89 (16%), Positives = 33/89 (37%), Gaps = 7/89 (7%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAV 321
           SGV      G ++ + L   + + ++     +++   +  Q LW++SG       +    
Sbjct: 55  SGVFHLLPLGLRVQEKLERLIDKHMRTLGASKLSLSSISSQALWEKSGRLKK---DSEFF 111

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNH 350
           K  D   +    F L P +     ++   
Sbjct: 112 KFED---RKEARFLLAPTHEEEITSLVAS 137


>gi|120612410|ref|YP_972088.1| seryl-tRNA synthetase [Acidovorax citrulli AAC00-1]
 gi|166200589|sp|A1TTM6|SYS_ACIAC RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|120590874|gb|ABM34314.1| seryl-tRNA synthetase [Acidovorax citrulli AAC00-1]
          Length = 439

 Score = 63.6 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 39/223 (17%), Positives = 78/223 (34%), Gaps = 15/223 (6%)

Query: 244 RDHRKLAREMDL-FHIAEDGSGVIFWHRKG--WKIFQTLISYMRRKIKD--DYEEINTPQ 298
           +DH  L   + L F +    SG  F   KG   ++ + L  +M         Y E   P 
Sbjct: 144 KDHVDLGEPLGLDFDMGVKLSGSRFTVMKGPIARLHRALAQFMLDVQTREHGYTECYVPY 203

Query: 299 VLDQHLWQQSGHWDSYRANMFAVK---CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           V++    + +G    +  ++FA K      + + D     L P +           +   
Sbjct: 204 VVNADSLRGTGQLPKFEGDLFAAKKGGQDGEPVPDNAALYLIPTSEVPLTNFVRDQVVPE 263

Query: 356 RELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
            ELP+RL      +R+E         G++R   F + +       ++ +    ++     
Sbjct: 264 SELPIRLTAHTPCFRSEAGSYGRDTRGMIRQHQFDKVEMVQITHPDRSYEALEEMTGHAE 323

Query: 413 SIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
           ++ +  G    ++ L T              +W  A+N  + +
Sbjct: 324 AVLQKLGLPYRVMSLCTGDMGFGAAKTYDLEVWLPAQNTYREI 366


>gi|297528389|ref|YP_003669664.1| seryl-tRNA synthetase [Geobacillus sp. C56-T3]
 gi|297251641|gb|ADI25087.1| seryl-tRNA synthetase [Geobacillus sp. C56-T3]
          Length = 424

 Score = 63.6 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 43/244 (17%), Positives = 90/244 (36%), Gaps = 22/244 (9%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAED----GSGVIFWHRKGWKIF 276
           G +     E+ ++      S E + H ++A  + L          GS  +F+   G ++ 
Sbjct: 115 GQSEEDNVEVRRWGEPRSFSFEPKPHWEIADRLGLLDFERAAKVAGSRFVFYKGLGARLE 174

Query: 277 QTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           + LI++M     D   YEE+  P ++++     +G    +  + F +        D   +
Sbjct: 175 RALINFMLDIHLDEFGYEEVLPPYLVNRASMIGTGQLPKFAEDAFHL--------DSEDY 226

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDA 391
            L P        +    + +  +LP+  A + + +R E   +     GL+R   F + + 
Sbjct: 227 FLIPTAEVPVTNLHRDEILAADDLPIYYAAYSACFRAEAGSAGRDTRGLIRQHQFNKVEL 286

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENI 447
             F   E  ++E  K+     +I +  G    +V L T              +W  +   
Sbjct: 287 VKFVKPEDSYDELEKLTRQAETILQRLGLPYRVVALCTGDLGFSAAKTYDIEVWLPSYGT 346

Query: 448 MKGV 451
            + +
Sbjct: 347 YREI 350


>gi|237744014|ref|ZP_04574495.1| histidyl-tRNA synthetase [Fusobacterium sp. 7_1]
 gi|229431243|gb|EEO41455.1| histidyl-tRNA synthetase [Fusobacterium sp. 7_1]
          Length = 413

 Score = 63.6 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 64/399 (16%), Positives = 132/399 (33%), Gaps = 63/399 (15%)

Query: 288 KDDYEEINTPQVLDQHLWQ--QSGHWDSYRANMFAVKCADDTIKDLR-TFALKPMNCPGH 344
              Y  + TP   +  L++       D     M+  K   D    LR       + C   
Sbjct: 34  NYGYNFVKTPIFEETELFKRGIGEATDVVEKEMYTFKDRGDRSITLRPENTASLVRCYLE 93

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
            A++     S      R    GS++R E   +     R R F Q    VF   E+     
Sbjct: 94  NAIYAKEEIS------RFYYNGSMFRYERPQA----GRQREFNQIGLEVFG--EKSPKVD 141

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            ++  +     K  G   + VK+++   K   +       E+  K  LD + +  +DRIN
Sbjct: 142 AEVIAIGYKFLKKLGISDLEVKINSVGSKESRTIYREKLIEHFSKH-LDDMCDDCKDRIN 200

Query: 465 TGVL-------LGEGAFY--GPKF-EYILKDAIGR----------------DWQCGTIQV 498
              L         +  FY   P   +++ +D                    +       +
Sbjct: 201 RNPLRLLDCKVDKDKDFYKSAPNIIDFLFEDERKHYEDVKKYLDVFGIKYTEDPTLVRGL 260

Query: 499 DFNLPSRFNAFYVN------------SHS---EKCHPVMIHRAVFGSIERFIGIMIENFK 543
           D+   + F                    +   E     +        +ER + ++ EN+ 
Sbjct: 261 DYYSSTVFEIVTNKLGSQGTVLGGGRYDNLLKELGDKDIPAVGFATGVERIMMLLGENYP 320

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
            N P         +  +  +  E A +IA  L+ + + +  D+  + +   +++     +
Sbjct: 321 KNNPD------VYIAWLGENTSETALKIAESLRDNDIKVYIDYSEKGMKSHMKKADKLSV 374

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
              II G+ E ++  + ++ F +   ++V + + +  + 
Sbjct: 375 RYCIILGEDELNKGIVLLKDFSTREQKEVKIEEIVNQIK 413


>gi|302801640|ref|XP_002982576.1| hypothetical protein SELMODRAFT_268613 [Selaginella moellendorffii]
 gi|300149675|gb|EFJ16329.1| hypothetical protein SELMODRAFT_268613 [Selaginella moellendorffii]
          Length = 676

 Score = 63.6 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 39/211 (18%), Positives = 73/211 (34%), Gaps = 31/211 (14%)

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
           K VL++++  S + +   V   E A   P    +  D+  + +      VD  +  +   
Sbjct: 450 KLVLESLEKLSSEEVVEMVAKLESAGEAP----LHSDSTDKTFTIKKGMVDKQVTKK--- 502

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG--------------NLPLWLSPIQ 554
                  E   P +I       I R I  + E+                   P  ++P++
Sbjct: 503 ---TKDKESFTPSVI--EPSFGIGRIIYCLFEHCFDTREGADSVEQLNFFRFPPVVAPVK 557

Query: 555 AIV--TTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
             V      +   E AQ I+  L+   L+++TD    +I  +        IP  I     
Sbjct: 558 CSVFSLVQNAGLDELAQSISVELRRAGLAVKTDITGRSIGKRYARTDEIGIPFAITV--- 614

Query: 613 EASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           ++SE  + +R   S    +V +     +L  
Sbjct: 615 DSSEGGVTVRDRDSKEQIRVPVEQVTQLLAD 645



 Score = 40.2 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 4/65 (6%)

Query: 335 ALKPMNCPGHVAVFNHGLKSYR--ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
            L+P    G    F + L  Y   +LP   A+ G  +RNE S    GL+RVR FT  +  
Sbjct: 232 YLRPETAQGMFVNF-NELLLYNGGKLPFGAAQVGQAFRNEISPR-QGLLRVREFTLAEIE 289

Query: 393 VFCTK 397
            F   
Sbjct: 290 FFVDP 294


>gi|67903696|ref|XP_682104.1| hypothetical protein AN8835.2 [Aspergillus nidulans FGSC A4]
 gi|40740933|gb|EAA60123.1| hypothetical protein AN8835.2 [Aspergillus nidulans FGSC A4]
          Length = 1309

 Score = 63.6 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/288 (12%), Positives = 90/288 (31%), Gaps = 36/288 (12%)

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
           F                   +Y  +G+ + +   + R    +        A  +++    
Sbjct: 351 FRQHMANEMAHYACDCWDAELYTSYGWIECVGC-ADRSAYDLNVHKNKTGAPLVVRETRA 409

Query: 454 TIKNSSQDRINTGVLLGEGAFYGP------KFEYILKDAIGRDWQCGTIQVDFNLPSRFN 507
                 + +I       +   +GP      K      DA+ ++ +   + +D     +  
Sbjct: 410 EPLKVEEWQIEL-----DKKKFGPRFKKDGKTVEAAIDALSQELR-EKLALDLEKTGKIE 463

Query: 508 AFYVNSHSEKCHPVMIHRAVFGSIE------RFIGIMIENFK-----------GNLPLWL 550
             Y+ +  ++     +       IE      R +  ++E+              + P  +
Sbjct: 464 VGYIITIEKRTRVENVREYTPNVIEPSFGIGRILYSLMEHVYYYREGDEARGVLSFPPVI 523

Query: 551 SPIQAIVTTIT--SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIII 608
           +P + ++  ++   +     QE+   L+   +S   D  + +I  +   +     P  + 
Sbjct: 524 APTKVLLVPLSSNPAFRPMVQELTTKLRRLGVSSRVDDSSASIGKRYARNDELGTPFGVT 583

Query: 609 CGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK----ESLPPDCQK 652
              +   + +I +R   ST   + S  + +  L      E    D +K
Sbjct: 584 VDFQSVKDNTITLRDRDSTKQVRASQEEILQALKSLVEGEETWEDVRK 631



 Score = 40.2 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 28/71 (39%), Gaps = 2/71 (2%)

Query: 335 ALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
            L+P    G    F   L+ + + +P   A  G  +RNE S    GL+RVR F   +   
Sbjct: 215 YLRPETAQGQFLNFQKLLEFNQQAMPFASASIGKSFRNEISPR-AGLLRVREFLMAEIEH 273

Query: 394 FCTKEQMFNEC 404
           F   E      
Sbjct: 274 FVDPEGGKKHA 284


>gi|221483162|gb|EEE21486.1| glycyl-tRNA synthetase, putative [Toxoplasma gondii GT1]
          Length = 134

 Score = 63.6 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/101 (18%), Positives = 41/101 (40%), Gaps = 3/101 (2%)

Query: 548 LWLSPIQAIVTTITSSAVE---YAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP 604
             L+P QA V  + ++  E    A+ +   L+    S+  DF + +I  + R      IP
Sbjct: 9   PALAPFQAAVFPVVTNVHELTARARRLCGWLRERGFSVLWDFSSTSIGRRYRRADGLGIP 68

Query: 605 IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
                     ++ ++ +R   S   +++   +A   L + +
Sbjct: 69  FCFTLDRTSLNDGTVTVRWRNSAEQRRLKFEEAESFLKERT 109


>gi|229917440|ref|YP_002886086.1| seryl-tRNA synthetase [Exiguobacterium sp. AT1b]
 gi|259511669|sp|C4KZX8|SYS_EXISA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|229468869|gb|ACQ70641.1| seryl-tRNA synthetase [Exiguobacterium sp. AT1b]
          Length = 427

 Score = 63.6 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/249 (14%), Positives = 87/249 (34%), Gaps = 25/249 (10%)

Query: 212 SNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRK 271
            +  +  R  GT      E  Q+   +E+ +  D  +  +           S  +F+   
Sbjct: 118 EDDNVTIREIGTKPEFDFEPKQHWDVMEDLQIVDVERAGKVTG--------SRFVFYKGL 169

Query: 272 GWKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
           G ++ + LI++M     D   Y E+  P ++++     +G    +  + F V   +    
Sbjct: 170 GARLERALINFMMDLHSDEHGYAEVLPPYMVNRDSMTGTGQLPKFEEDAFKVADTN---- 225

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGF 386
               + L P        +    +    +LP+    + + +R+E   +     GL+R   F
Sbjct: 226 ----YFLVPTAEVPVTNMHREEILPETQLPIAYTAYSANFRSEAGSAGRDTRGLIRQHQF 281

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALWD 442
            + +   F   E+ + +   +      + K  G    ++ + T              +W 
Sbjct: 282 NKVELVRFVKPEESYEQLELLTGHAEEVLKRLGLPYQVLSMCTADLGFTAAKKYDIEVWM 341

Query: 443 DAENIMKGV 451
            A+ + + +
Sbjct: 342 PAQGVYREI 350


>gi|52425505|ref|YP_088642.1| seryl-tRNA synthetase [Mannheimia succiniciproducens MBEL55E]
 gi|67461718|sp|Q65SK3|SYS_MANSM RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|52307557|gb|AAU38057.1| SerS protein [Mannheimia succiniciproducens MBEL55E]
          Length = 430

 Score = 63.6 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/188 (13%), Positives = 63/188 (33%), Gaps = 13/188 (6%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            K+ + L  +M     +   Y E   P +++      +G    +  ++F     +  +  
Sbjct: 172 AKMHRALAQFMLDLHTEQHGYTETYVPYLVNHTTLYGTGQLPKFGEDLFHTTPLEGEV-- 229

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
              +AL P        +    + +  +LP+R+      +R+E         GL+R+  F 
Sbjct: 230 --PYALIPTAEVPVTNLVRDEILNTEDLPIRMTAHTPCFRSEAGSYGRDTRGLIRMHQFD 287

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       ++      ++      + +  G     + L T              +W  
Sbjct: 288 KVEMVQIVDPDKSMEALEELTAHAEKVLQLLGLPYRKMLLCTGDMGFGSCKTYDLEVWVP 347

Query: 444 AENIMKGV 451
           A++  + +
Sbjct: 348 AQDTYREI 355


>gi|258593676|emb|CBE70017.1| Seryl-tRNA synthetase (Serine--tRNA ligase) [NC10 bacterium 'Dutch
           sediment']
          Length = 428

 Score = 63.6 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 59/189 (31%), Gaps = 17/189 (8%)

Query: 272 GWKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
           G ++ + LI +M      +  Y EI  P +++    + +G    +   +F  K       
Sbjct: 170 GARLERALIGFMLDLHGKEHGYTEILPPLLVNAEAMRGTGQLPKFGEELFKTKD------ 223

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGF 386
                 + P        +    +     LP+    +   +R E         GLMR   F
Sbjct: 224 --EGLYMIPTAEVPVTNLHREEILPPGTLPLSYVAYTPCFRREAGSYGKDTRGLMRQHQF 281

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALWD 442
            + +       E+ +    ++     ++ +  G     V L T              LW 
Sbjct: 282 NKVELVKLAEPERSYEALEEMTRHAETVLQRLGLPYRTVALCTTDLGFAAAKTYDIELWI 341

Query: 443 DAENIMKGV 451
            ++   + V
Sbjct: 342 PSQGTYREV 350


>gi|323490013|ref|ZP_08095234.1| histidyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
 gi|323396309|gb|EGA89134.1| histidyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
          Length = 426

 Score = 63.6 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 65/420 (15%), Positives = 137/420 (32%), Gaps = 67/420 (15%)

Query: 276 FQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQS--GHWDSYRANMFAVKCADDTIKDLR 332
           +Q +   +    +   Y+EI TP      L+Q+      D  +  M+  +   D     R
Sbjct: 20  WQEVEQKINDLCRLYQYKEIRTPIFEHTELFQRGVGDTTDIVQKEMYTFQDRGD-----R 74

Query: 333 TFALKPMNCPGHVAVFNHGLKSY----RELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQ 388
           +  L+P    G  +V    +++      + PV+L   G ++R E   +     R+R F Q
Sbjct: 75  SLTLRP---EGTASVVRSYVENKLFGMPDQPVKLFYTGPMFRYERPQA----GRMRQFVQ 127

Query: 389 DDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM---VKLSTRPEKRVGSDALWDDAE 445
                  +K+   +   ++ +L + +Y+  G +K+      L     +    +AL    E
Sbjct: 128 FGVEAIGSKDPAIDA--EVISLAMEVYRSVGLKKLRLVINSLGDTESRIAHKEALIKHFE 185

Query: 446 NIMKGVLDTIKNSSQDRI----------------------NTGVLLGEGAFY-------G 476
             +    +  +   +                         N         F         
Sbjct: 186 PSINEFCNDCQTRLEKNPLRILDCKVDRNHPLMATAPSLTNYLNEESRAYFDEVQSYLTS 245

Query: 477 PKFEYILKDAI--GRDWQCGTIQVDFNLPSRFNAFYVNSHSEK--------CHPVMIHRA 526
              E+++   +  G D+   T     +    F A    +   +          P      
Sbjct: 246 MDIEFVVDPNLVRGLDYYNHTAFEIMSDAEGFGAITTLAGGGRYNGLVEDLGGPDAPGIG 305

Query: 527 VFGSIERFIGIM-IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD 585
              SIER +  + +E         L      V  +  S  + A  +   L+ + +S + D
Sbjct: 306 FAMSIERLLLALEMEKVVIGQSNNLE---VYVVAMDESTKKKAFAVVRDLRVNGISADMD 362

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           F    +  +++    K    +I+ G+ E     + ++   +   Q++S  +    L K+ 
Sbjct: 363 FTGRKVKAQMKSADRKGAAFVIVIGETELESGKVALKEMATGEQQEMSFDEIASNLLKKK 422


>gi|320354759|ref|YP_004196098.1| alanyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
 gi|320123261|gb|ADW18807.1| alanyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
          Length = 882

 Score = 63.6 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/139 (23%), Positives = 60/139 (43%), Gaps = 10/139 (7%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEK 124
           D R+   + H+  H++  A++ +  +     G  ++ +   +DF    P +  E+  IE+
Sbjct: 560 DRRTDTALNHTATHLLQAAMKKVLGDHVKQAGSAVDHNRLRFDFTHFSPLTHGEICTIEQ 619

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLC 183
            +   I R++P     L  E+A     +     K          E V + R G++  +LC
Sbjct: 620 LVNAQIRRNTPVDTTLLGREQAIAEGATALFGEKY--------GEEVRVVRIGDFSKELC 671

Query: 184 RGPHVRSTGQVKKFFKLMK 202
            G H R TG +  F  +M+
Sbjct: 672 GGTHARMTGDIGLFKIVME 690


>gi|227513282|ref|ZP_03943331.1| histidyl-tRNA synthetase [Lactobacillus buchneri ATCC 11577]
 gi|227083483|gb|EEI18795.1| histidyl-tRNA synthetase [Lactobacillus buchneri ATCC 11577]
          Length = 430

 Score = 63.6 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 65/424 (15%), Positives = 130/424 (30%), Gaps = 63/424 (14%)

Query: 269 HRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
             +  + +  +    R    D  Y+EI TP   +  ++ ++       +++   +  D  
Sbjct: 13  LPEEARKWTYVEETARMLFNDYRYQEIRTPMFENFDVFSRTS---GDTSDVVTKEMYDFK 69

Query: 328 IKDLRTFALKPMNCPGHVAVF--NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRG 385
            K  R  +L+P    G V  F  N       + PV++   GS++R E   S     R R 
Sbjct: 70  DKGDRHISLRPEGTAGVVRAFVENKLYGPEHQRPVKVFYMGSMFRYERPQS----GRQRE 125

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM--------------VKLSTRP 431
           F Q     F + E   +   ++  + + +   FG + I                + +   
Sbjct: 126 FHQIGVEAFGSDEPELDV--EVIAMGMDLLHHFGLKDIRLEINSLGDAASRAAYRQALID 183

Query: 432 EKRVGSDALWDDAENIMKG----VLDTIKNSSQDR-------INTGVLLGEGAFYGPKFE 480
                 D L  D++  +      VLD+     Q+        ++      +  F   K  
Sbjct: 184 YLDPHFDELSKDSQVRLHKNPLRVLDSKDKQDQEIVKDAPSILDYLNDDSKKHFERVK-- 241

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK---------------------CH 519
             L D +   +      V          F +   S+                        
Sbjct: 242 -KLLDTLHIPYVIDPDMVRGLDYYTHTIFEIMVDSKALGEGYTTICAGGRYNGLVEQLGG 300

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH 579
           P M        +ER +  ++ + +G     L  + A V  I         +I   L+++ 
Sbjct: 301 PEMPGIGFGLGMERLM--LLMDAQGVKFPVLDQLDAYVVGIGEQTSIETLKIVQALRANG 358

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
            + + D+ N     + +          I  G+ E    +  ++   S     V +   I 
Sbjct: 359 FAADRDYLNRKPKAQFKSADKLNAQYTITIGESELESHTANVKSMASGKEINVPIDKIIN 418

Query: 640 ILTK 643
              +
Sbjct: 419 DFDE 422


>gi|326318495|ref|YP_004236167.1| seryl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC 19860]
 gi|323375331|gb|ADX47600.1| seryl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC 19860]
          Length = 439

 Score = 63.6 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 40/223 (17%), Positives = 78/223 (34%), Gaps = 15/223 (6%)

Query: 244 RDHRKLAREMDL-FHIAEDGSGVIFWHRKG--WKIFQTLISYMRRKIKD--DYEEINTPQ 298
           RDH  L   + L F +    SG  F   KG   ++ + L  +M         Y E   P 
Sbjct: 144 RDHVDLGEPLGLDFDMGVKLSGSRFTVMKGPIARLHRALAQFMLDVQTREHGYTECYVPY 203

Query: 299 VLDQHLWQQSGHWDSYRANMFAVK---CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           V++    + +G    +  ++FA K      + + D     L P +           +   
Sbjct: 204 VVNADSLRGTGQLPKFEGDLFAAKKGGQDGEPVPDNAALYLIPTSEVPLTNFVRDQVVPE 263

Query: 356 RELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
            ELP+RL      +R+E         G++R   F + +       ++ +    ++     
Sbjct: 264 AELPIRLTAHTPCFRSEAGSYGRDTRGMIRQHQFDKVEMVQITHPDRSYEALEEMTGHAE 323

Query: 413 SIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
           ++ +  G    ++ L T              +W  A+N  + +
Sbjct: 324 AVLRKLGLPYRVMSLCTGDMGFGAAKTYDLEVWLPAQNTYREI 366


>gi|229013621|ref|ZP_04170752.1| Histidyl-tRNA synthetase 2 [Bacillus mycoides DSM 2048]
 gi|228747680|gb|EEL97552.1| Histidyl-tRNA synthetase 2 [Bacillus mycoides DSM 2048]
          Length = 476

 Score = 63.6 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 74/465 (15%), Positives = 149/465 (32%), Gaps = 64/465 (13%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWK--------IFQTLISY 282
              Y   +   +  +       + L    E+   +     +G +        ++Q +   
Sbjct: 21  HHGYNTLVPTVQTVEAGVFLFLLRLKQFEEEL-NMSIQIPRGTQDILPGSVELWQYIEGQ 79

Query: 283 MRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPM-N 340
            R   +  +Y+EI TP        +          ++   +      +  R+  L+P   
Sbjct: 80  AREICRRYNYKEIRTPIF---EHTELFLRGVGDTTDIVQKEMYSFQDRGERSLTLRPEGT 136

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
            P   +   + +      P +L   G ++R E   +     R R F Q       + +  
Sbjct: 137 APVVRSYVENKMFGDATQPTKLYYIGQMFRYERPQA----GRYRQFVQFGIEAIGSNDPA 192

Query: 401 FNECLKIHNLIISIYKDFGFEKI---MVKLSTRPEKRVGSDALWDDAENIMKG------- 450
            +   ++  L +  Y+  G + I   +  L     ++   DAL    E  +         
Sbjct: 193 IDA--EVIALAVEFYRGMGLKNIKVVLNSLGDAASRQAHRDALIAHFEPRIGEFCSDCQS 250

Query: 451 --------VLDTIKNSSQDRINT-----GVLLGEGAFYGPK-----------FEYILKDA 486
                   +LD  K+ + + + T       L  + A Y  K           FE      
Sbjct: 251 RLEKNPLRILDCKKDRNHELMGTAPSITEYLNEDSAVYYDKVQELLTMMDVPFEKDPNLV 310

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHS--------EKCHPVMIHRAVFGSIERFIGIM 538
            G D+   T+    +    F A    S          E   P M       SIER I  +
Sbjct: 311 RGLDYYQHTVFEIMSEAEGFGAITTLSGGGRYNGLVQEIGGPEMPGIGFAMSIERLIMAL 370

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
            +     LP+    I   V  +   A + A ++A  L+   LS+E D+ +  +  + +  
Sbjct: 371 -KAENIELPIE-HSIDCYVVALGEKAKDRAAKVAFDLRKAGLSVEKDYLDRKMKAQFKSA 428

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
                  + + G+ E  +  I ++   +   ++V+L      + +
Sbjct: 429 DRLNAKYVAVLGEDELDKGIINLKDMATGGQEEVALDVFASYVAE 473


>gi|220927137|ref|YP_002502439.1| seryl-tRNA synthetase [Methylobacterium nodulans ORS 2060]
 gi|254783036|sp|B8IN20|SYS_METNO RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|219951744|gb|ACL62136.1| seryl-tRNA synthetase [Methylobacterium nodulans ORS 2060]
          Length = 437

 Score = 63.6 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 42/244 (17%), Positives = 77/244 (31%), Gaps = 14/244 (5%)

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI--AEDGSGVIFWHRKG--WKIFQ 277
           G   +   E  ++         R H +L     L     A   SG  F   KG   ++ +
Sbjct: 116 GRDEHDNVEYRRFEGRGRAEAGRQHFELGEATGLMDFEAAAKLSGARFVVLKGHLARLER 175

Query: 278 TLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFA 335
            L  +M      +  Y E+  P ++   +   +     +R + FA        +      
Sbjct: 176 ALGQFMLDLHTTEHGYTEVAPPLLVRDEVMFGTAQLPKFRDDQFAAMPGSVEAEGGAPTR 235

Query: 336 -LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDA 391
            L P        +    + S  ELP+R       +R E   +     G++R   FT+ + 
Sbjct: 236 WLIPTAEVPLTNLVRESILSEDELPLRFTALTPCFRAEAGAAGRDTRGMLRQHQFTKVEL 295

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENI 447
               T EQ   E  ++     ++ K       +V L T              +W   +  
Sbjct: 296 VSVTTPEQSDEEHERMLASAEAVLKKLDLPYRVVTLCTGDMGFASQKTYDIEVWLPGQGT 355

Query: 448 MKGV 451
            + +
Sbjct: 356 FREI 359


>gi|297584745|ref|YP_003700525.1| histidyl-tRNA synthetase [Bacillus selenitireducens MLS10]
 gi|297143202|gb|ADH99959.1| histidyl-tRNA synthetase [Bacillus selenitireducens MLS10]
          Length = 429

 Score = 63.6 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 66/411 (16%), Positives = 132/411 (32%), Gaps = 55/411 (13%)

Query: 276 FQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           +Q + +  R       Y EI TP      L+ +         ++   +      K  R+ 
Sbjct: 23  WQYIENKARDLCARYRYREIRTPMFEQTELFARG---VGDTTDIVQKEMYTFEDKGGRSL 79

Query: 335 ALKPM-NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
            L+P        +  +  +  + + PV+L   G ++R E   S     R+R F Q     
Sbjct: 80  TLRPEGTASTVRSFVDQKMHGWADQPVKLFYIGPMFRYERPQS----GRMRQFVQFGVEA 135

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFG----------------FEKIMVKLSTRPEKRVGS 437
             + +   +   ++  L +  Y++ G                 E     L +  E  +G 
Sbjct: 136 MGSSDPAIDA--EVIGLAMDFYRELGLKGVKLVLNSLGDQESRENHRNALISHFEPVIGE 193

Query: 438 DALWDDA--ENIMKGVLDTIKNSSQDR-------INTGVLLGEGAFYGPK---------F 479
                 A  E     +LD  K+   ++       ++      +  F   K         +
Sbjct: 194 LCSDCQARLEKNPLRILDCKKDRDHEKMAAAPSILDYLNEESKAYFETVKSYLEAMGIPY 253

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS--------EKCHPVMIHRAVFGSI 531
           E       G D+   T          F A               E   P         SI
Sbjct: 254 EVDPGLVRGLDYYNNTAFEIMIDGEGFGAITTLMGGGRYNGLVEEIGGPETPGIGFALSI 313

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           ER +  +    +G        I A +  +  +A  +  ++ + L+S  LS++TD+ N  +
Sbjct: 314 ERLLMAL--ESQGITLPVNHGIDAYMVALGDAAKAHVPKLVHELRSAGLSVDTDYLNRKM 371

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             +++          +I GD+E    +I ++   +   + + + +    L 
Sbjct: 372 KGQMKAAGRLHARYALILGDEELEAGTIEVKHMETGNQETIQISELAAYLQ 422


>gi|148826541|ref|YP_001291294.1| alanyl-tRNA synthetase [Haemophilus influenzae PittEE]
 gi|229845865|ref|ZP_04465977.1| alanyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
 gi|205830060|sp|A5UDR0|SYA_HAEIE RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|148716701|gb|ABQ98911.1| alanyl-tRNA synthetase [Haemophilus influenzae PittEE]
 gi|229810869|gb|EEP46586.1| alanyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
          Length = 874

 Score = 63.6 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 46/229 (20%), Positives = 86/229 (37%), Gaps = 36/229 (15%)

Query: 3   SDIKLT--FPDG-SIKNFPVHATGSDVAE----------SISRSLAKKAVAVAIN----- 44
           S  K+T  F DG S+++     +   + E           I  S    A  V  N     
Sbjct: 465 SQAKITALFYDGKSVESIEAGQSAVVILENTPFYAESGGQIGDSGYLSAQGVTFNVKDTQ 524

Query: 45  --GKVCDLSDPVREGSIEI------ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAI 96
             G+V      + +GS+++      I     R    + HS  H++  A++ I     V  
Sbjct: 525 KYGQVFGHIGELTQGSLKVGQSVNAIVDAKRRHNTSLNHSATHLLHAALRQILGLHVVQK 584

Query: 97  GPIIEDG-FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKE 155
           G ++ D    +DF + +  + ++L QIE  + + I  + P     +  + A+        
Sbjct: 585 GSLVSDKALRFDFAQPEAITKEQLTQIETLVNQKIRANFPVQTDIMDIDSAKAKGAMALF 644

Query: 156 AYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKFFKLMKV 203
             K          + V +   G++  +LC G H + TG +  F  + + 
Sbjct: 645 GEKY--------GDKVRVLTMGDFSIELCGGIHAKRTGDIGLFKIITEN 685


>gi|86146326|ref|ZP_01064650.1| alanyl-tRNA synthetase [Vibrio sp. MED222]
 gi|85835805|gb|EAQ53939.1| alanyl-tRNA synthetase [Vibrio sp. MED222]
          Length = 860

 Score = 63.6 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 58/143 (40%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFS 115
             +E     + R+   + HS  H++  A++ +  E     G +++ D   +DF   +  +
Sbjct: 545 DKVEATVDAERRAAISLNHSATHLLHSALREVLGEHVAQKGSLVKPDNLRFDFSNLEAVT 604

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
             ++ ++E+ +   + ++       +  E A+E         K          + V +  
Sbjct: 605 PAQIKEVERLVNAQVRKNHVIETNIMDIESAKEKGAMALFGEKY--------DDEVRVLS 656

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G++  +LC G H  +TG +  F
Sbjct: 657 MGDFSTELCGGIHASNTGDIGLF 679


>gi|193213437|ref|YP_001999390.1| histidyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327]
 gi|229558644|sp|B3QQI7|SYH_CHLP8 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|193086914|gb|ACF12190.1| histidyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327]
          Length = 430

 Score = 63.6 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 16/98 (16%), Positives = 36/98 (36%), Gaps = 4/98 (4%)

Query: 555 AIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
             V        ++A ++A  L+   L  E D    ++  ++R+ +       +  G  E 
Sbjct: 333 VYVVVQQKELTDHAMQVAFRLRKSGLKTEIDLAGRSMKAQMRDANRMGAAYALFIGQSEM 392

Query: 615 SERSIGIRRFGSTTTQKVSLLDAIPIL----TKESLPP 648
                 ++   ++    + L   I +L    ++ES  P
Sbjct: 393 ESGHYALKNLETSEQTSLDLDAIIEVLHEAVSQESARP 430


>gi|333030166|ref|ZP_08458227.1| seryl-tRNA synthetase [Bacteroides coprosuis DSM 18011]
 gi|332740763|gb|EGJ71245.1| seryl-tRNA synthetase [Bacteroides coprosuis DSM 18011]
          Length = 424

 Score = 63.6 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 68/198 (34%), Gaps = 16/198 (8%)

Query: 245 DHRKLAREMDLFHIA----EDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQV 299
            H +LA++ DL          G+G   +  KG ++ + LI++ +       Y EI  P V
Sbjct: 143 PHWELAKKYDLIDFELGVKITGAGFPVYKGKGARLQRALINFFLDEARDAGYLEIEPPYV 202

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           ++            +       K             L P        ++   + + +ELP
Sbjct: 203 VNA--------ASGFGTGQLPDKEGQMYHATADDLYLIPTAEVPVTNIYRDVILNEKELP 254

Query: 360 VRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ++   + + +R E       + GL R+  F + +     T E  +    ++   +  +  
Sbjct: 255 IKNCAYSACFRREAGSYGKDVRGLNRLHQFNKVEIVRIDTPEHSYESLKEMIAHVEGLVN 314

Query: 417 DFGFEKIMVKLSTRPEKR 434
             G    +++L       
Sbjct: 315 KLGLPYRILRLCGGDMSF 332


>gi|330685310|gb|EGG96971.1| serine--tRNA ligase [Staphylococcus epidermidis VCU121]
          Length = 428

 Score = 63.6 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 48/344 (13%), Positives = 105/344 (30%), Gaps = 48/344 (13%)

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
           +E+     K+ E IA+     +   + +          +  K            +     
Sbjct: 46  EEMKAKRNKVSEEIAQK---KRNKENADDVIAEMRQLGDDIK-------EYDTQLNEIDN 95

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
                LCR P++ +    +       +    W             GT      E   +  
Sbjct: 96  KMSDILCRIPNLINDDVPQGASDEENIEVKKW-------------GTPREFDFEAKAHWD 142

Query: 237 FLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI--KDDYEEI 294
            +E+ +  D  + A+      +             G ++ + L++YM  K   +  Y E+
Sbjct: 143 IVEDLKMADFDRAAKISGARFVYLTR--------DGAQLERALMNYMITKHTTQHGYTEM 194

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
             PQ+++      +G    +  ++F V        +       P         +   +  
Sbjct: 195 MVPQLVNADTMYGTGQLPKFEEDLFKV--------EKEGLYTIPTAEVPLTNFYRDEIIQ 246

Query: 355 YRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI 411
              LP +     + +R+E   +     GL+R+  F + +   F   E  ++   ++    
Sbjct: 247 PGVLPEKFTGQSACFRSEAGSAGRDTRGLIRLHQFDKVEMVRFEKPEDSWDALEEMTTNA 306

Query: 412 ISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
            +I ++ G     V L T              +W  + N  K +
Sbjct: 307 EAILEELGLPYRRVILCTGDIGFSASKTYDLEVWLPSYNDYKEI 350


>gi|238921100|ref|YP_002934615.1| alanyl-tRNA synthetase, [Edwardsiella ictaluri 93-146]
 gi|238870669|gb|ACR70380.1| alanyl-tRNA synthetase, putative [Edwardsiella ictaluri 93-146]
          Length = 875

 Score = 63.6 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 53/132 (40%), Gaps = 10/132 (7%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           HS  H+M  A++S+  E     G ++ DG   +DF   +     ++ Q+E  +   I R+
Sbjct: 564 HSATHLMHAALRSVLGEHVAQKGSLVSDGALRFDFSHAEAMKPRQIRQVEDIVNAQIRRN 623

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTG 192
            P   Q +  E+A+          K            V +   G++  +LC G H   TG
Sbjct: 624 LPIDTQEMGLEEAKAKGAMALFGEKY--------DAQVRVLSMGDFSTELCGGTHAERTG 675

Query: 193 QVKKFFKLMKVA 204
            +  F  + +  
Sbjct: 676 DIGLFRIVSESG 687


>gi|78357417|ref|YP_388866.1| alanyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|123552081|sp|Q30YS5|SYA_DESDG RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|78219822|gb|ABB39171.1| alanyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 880

 Score = 63.6 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 65/152 (42%), Gaps = 8/152 (5%)

Query: 54  VREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQ 112
           +R+ ++ +   E  R  +   H+C HI+  A++ +  +     G ++      +DF    
Sbjct: 550 LRDQAVTLTVREGQRFASARNHTCTHILHAALRKVLGDHVKQAGSLVGPERLRFDFTHIS 609

Query: 113 PFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVT 172
             + +E+  +E ++  +I  D     ++++++ A +         K E        E   
Sbjct: 610 AMTPEEILAVENEVNRVILSDIALNSEHMAYDDAVQKGAMALFGEKYE-------SEVRV 662

Query: 173 LYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVA 204
           +   GE  +LC G H+R+TGQ   F+   +  
Sbjct: 663 VSIPGESVELCGGTHLRATGQAGSFYITSESG 694


>gi|15791150|ref|NP_280974.1| glycyl-tRNA synthetase [Halobacterium sp. NRC-1]
 gi|169236906|ref|YP_001690106.1| glycyl-tRNA synthetase [Halobacterium salinarum R1]
 gi|10581762|gb|AAG20454.1| glycine-tRNA synthetase [Halobacterium sp. NRC-1]
 gi|167727972|emb|CAP14760.1| glycine--tRNA ligase [Halobacterium salinarum R1]
          Length = 576

 Score = 63.6 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 59/170 (34%), Gaps = 16/170 (9%)

Query: 488 GRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIH--RAVFGSIERFIGIMIENFKGN 545
           G +         + +P+    F V   +E    ++ H     FG        +  +++ +
Sbjct: 396 GDEVTVDVDGEAYTVPTERTGFEVAEETESGRHIIPHVVEPAFGIGRAVYTALAHSYEAD 455

Query: 546 -----------LPLWLSPIQAIVTTITSS--AVEYAQEIANLLKSHHLSIETDFRNETIN 592
                      LP  ++P    V  +       E A+EIA  L++  L++  D     I 
Sbjct: 456 EVDGEPRDVLRLPAEVAPTTVGVFPLMDKDGLGERAREIAAELRAAGLAVTYDDSGN-IG 514

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            + R       P  +    +   E ++ +R   +TT  +V + +    L 
Sbjct: 515 RRYRRQDEVGTPYCVTVDYEALEEGAVTLRDRDTTTQVRVPIAEVAETLV 564



 Score = 49.4 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 63/217 (29%), Gaps = 67/217 (30%)

Query: 247 RKLAREMDLFHIAEDGSG----VIFWHRKGWKIFQTLISYMRRKI--KDDYEEINTPQVL 300
            +LAR    F  A +  G       +  +G  + + +    R +   ++   EI++P V 
Sbjct: 6   SELARRRGFFFQASEAYGGAAGFYTYGPEGAALKRNIEDAWRDRFVTREGNMEIDSPTVT 65

Query: 301 DQHLWQQSGHWDSY---------RANMFAVKCADDTIKDLRTFALKPMN----------- 340
            + ++Q SGH D +                    +   D+      P +           
Sbjct: 66  PEPVFQASGHLDDFDDMLVECPDCGESHRADHVIEDNTDVEDAESMPTDEVEALIADHEL 125

Query: 341 -CP---------------------------------------GHVAVFNHGLKSYRELPV 360
            CP                                                  +  +LP 
Sbjct: 126 VCPACGGPLAGQSVTGFNLMFDTTIGPGDGDPGYLRPETAQGMFTEFPRLKEYARNQLPF 185

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK 397
            +A+ G+ YRNE S   + L+R R FT  +   F   
Sbjct: 186 GVAQVGTGYRNEISPR-NALLRTREFTMAELEFFVDP 221


>gi|312898889|ref|ZP_07758277.1| alanyl-tRNA synthetase [Megasphaera micronuciformis F0359]
 gi|310620051|gb|EFQ03623.1| alanyl-tRNA synthetase [Megasphaera micronuciformis F0359]
          Length = 868

 Score = 63.6 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 59/139 (42%), Gaps = 9/139 (6%)

Query: 62  ITPEDPRSLAVIR-HSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDEL 119
           IT +  R+L + R H+  H++  A++ +        G  +  +   +DF    P +++EL
Sbjct: 542 ITVDKVRNLDIARNHTATHLLQAALRKVLGTHVNQAGSLVTPERLRFDFTHFSPMTNEEL 601

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           A++EK++   I ++     + +  + A +         K   +  +       +   G  
Sbjct: 602 AEVEKEVNRQIMKNVDLEIEEMPVDDAIKKGAMALFGEKYGDIVRV-------VNVPGFS 654

Query: 180 FDLCRGPHVRSTGQVKKFF 198
            +LC G HV +T  +  F 
Sbjct: 655 CELCGGSHVPNTSVIGSFR 673


>gi|261880084|ref|ZP_06006511.1| alanine-tRNA ligase [Prevotella bergensis DSM 17361]
 gi|270333239|gb|EFA44025.1| alanine-tRNA ligase [Prevotella bergensis DSM 17361]
          Length = 886

 Score = 63.6 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 80/234 (34%), Gaps = 24/234 (10%)

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQ 121
              D R+ +   H+  H++  A++ +  +     G  +  D   +DF   Q  + +EL +
Sbjct: 564 VDTDKRTASAANHTATHLLDYALKKVLGDHVEQKGSYVSADTLRFDFAHFQKVTDEELRE 623

Query: 122 IEKKMQEIIARDSPF-LKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +E+ +  ++  D P    +    E+A+++        K          + V + R G   
Sbjct: 624 VERLVNRLVREDHPMDEHRDTPVEEAKKMGAVALFGEKY--------GDKVRVVRFGPSC 675

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVA--------------GAYWRGDSNRPMLSRIYGTAWN 226
           + C G H +STG +  F  L + +                     +    +  I G   N
Sbjct: 676 EFCGGIHAKSTGCIGMFKILSESSVAAGVRRIEAMTGQKCEEAMYTLEDTVRYIKGVFNN 735

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLI 280
           ++   +    F+EE+ +      +                     G  + + +I
Sbjct: 736 SKDLKSTIEKFIEENAQMKKEMESFRSQAVDRTAKTLAERVQTVNGMNVVKAVI 789


>gi|227510275|ref|ZP_03940324.1| histidyl-tRNA synthetase [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
 gi|227189927|gb|EEI69994.1| histidyl-tRNA synthetase [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
          Length = 430

 Score = 63.6 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 65/424 (15%), Positives = 130/424 (30%), Gaps = 63/424 (14%)

Query: 269 HRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
             +  + +  +    R    D  Y+EI TP   +  ++ ++       +++   +  D  
Sbjct: 13  LPEEARKWTYVEETARMLFNDYRYQEIRTPMFENFDVFSRTS---GDTSDVVTKEMYDFK 69

Query: 328 IKDLRTFALKPMNCPGHVAVF--NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRG 385
            K  R  +L+P    G V  F  N       + PV++   GS++R E   S     R R 
Sbjct: 70  DKGDRHISLRPEGTAGVVRAFVENKLYGPEHQRPVKVFYMGSMFRYERPQS----GRQRE 125

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM--------------VKLSTRP 431
           F Q     F + E   +   ++  + + +   FG + I                + +   
Sbjct: 126 FHQIGVEAFGSDEPELDV--EVIAMGMDLLHHFGLKDIRLEINSLGDAASRDAYRQALID 183

Query: 432 EKRVGSDALWDDAENIMKG----VLDTIKNSSQDR-------INTGVLLGEGAFYGPKFE 480
                 D L  D++  +      VLD+     Q+        ++      +  F   K  
Sbjct: 184 YLDPHFDELSKDSQVRLHKNPLRVLDSKDKQDQEIVKDAPSILDYLNDDSKKHFERVK-- 241

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK---------------------CH 519
             L D +   +      V          F +   S+                        
Sbjct: 242 -KLLDTLHIPYVIDPDMVRGLDYYTHTIFEIMVDSKALGEGYTTICAGGRYNGLVEQLGG 300

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH 579
           P M        +ER +  ++ + +G     L  + A V  I         +I   L+++ 
Sbjct: 301 PEMPGIGFGLGMERLM--LLMDAQGVKFPVLDQLDAYVVGIGEQTSIETLKIVQALRANG 358

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
            + + D+ N     + +          I  G+ E    +  ++   S     V +   I 
Sbjct: 359 FAADRDYLNRKPKAQFKSADKLNAQYTITIGESELESHTANVKSMASGKEINVPIDKIIN 418

Query: 640 ILTK 643
              +
Sbjct: 419 DFDE 422


>gi|94967422|ref|YP_589470.1| seryl-tRNA synthetase [Candidatus Koribacter versatilis Ellin345]
 gi|94549472|gb|ABF39396.1| seryl-tRNA synthetase [Candidatus Koribacter versatilis Ellin345]
          Length = 432

 Score = 63.6 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 68/190 (35%), Gaps = 15/190 (7%)

Query: 271 KGWKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTI 328
            G K+ + L+++M      +  Y E+  P +++      +G    + A++F V   +   
Sbjct: 172 LGAKLERALMNFMLDLHTKEHGYTEVLPPFLVNADSMYGTGQLPKFEADLFKVPHGE--- 228

Query: 329 KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRG 385
              R   L P        ++        +LP  L  +   +R+E       + G++R   
Sbjct: 229 ---RNLYLIPTAEVPVTNLYRDETLDAAQLPTSLTAYTPCFRSEAGSYGKDVRGIIRQHQ 285

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALW 441
           F + +   F   E+ + E  K+      + +  G     + L T              +W
Sbjct: 286 FQKVELVKFTKPEESYAEHEKLTRNAEEVLQRLGLHYRTMVLCTGDMGFSSAKTYDIEVW 345

Query: 442 DDAENIMKGV 451
              +N+ + +
Sbjct: 346 LPGQNLYREI 355


>gi|86151665|ref|ZP_01069879.1| alanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 260.94]
 gi|315124034|ref|YP_004066038.1| alanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|85841294|gb|EAQ58542.1| alanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 260.94]
 gi|315017756|gb|ADT65849.1| alanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
          Length = 842

 Score = 63.6 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/142 (23%), Positives = 63/142 (44%), Gaps = 9/142 (6%)

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQI 122
             + R      HS  H++  A++ I        G ++E +   +DF   +  S +EL  I
Sbjct: 538 DTEKREQIARHHSATHLLHHALREILGSHVSQAGSLVESNKLRFDFTHHKALSKEELESI 597

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK++ E+I   S  + + +  E+A++         K +         NV +   GE  +L
Sbjct: 598 EKRVNEMIINSSEAILENMPLEEAKKSGAIALFNEKYQ--------GNVRVLTLGESKEL 649

Query: 183 CRGPHVRSTGQVKKFFKLMKVA 204
           C G HV++T Q+  F+ + +  
Sbjct: 650 CGGTHVKNTAQIGSFYIVKESG 671


>gi|86153544|ref|ZP_01071748.1| alanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni HB93-13]
 gi|85843270|gb|EAQ60481.1| alanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni HB93-13]
          Length = 842

 Score = 63.6 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/142 (23%), Positives = 63/142 (44%), Gaps = 9/142 (6%)

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQI 122
             + R      HS  H++  A++ I        G ++E +   +DF   +  S +EL  I
Sbjct: 538 DTEKREQIARHHSATHLLHHALREILGSHVSQAGSLVESNKLRFDFTHHKALSKEELESI 597

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK++ E+I   S  + + +  E+A++         K +         NV +   GE  +L
Sbjct: 598 EKRVNEMIINSSEAILENMPLEEAKKSGAIALFNEKYQ--------GNVRVLTLGESKEL 649

Query: 183 CRGPHVRSTGQVKKFFKLMKVA 204
           C G HV++T Q+  F+ + +  
Sbjct: 650 CGGTHVKNTAQIGSFYIVKESG 671


>gi|300023633|ref|YP_003756244.1| alanyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888]
 gi|299525454|gb|ADJ23923.1| alanyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888]
          Length = 897

 Score = 63.6 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/139 (20%), Positives = 58/139 (41%), Gaps = 4/139 (2%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFS 115
            ++EI      R+     HS  H++ EA++ +        G ++  D   +DF   +P S
Sbjct: 556 DAVEIEVDHARRTATRANHSATHLLHEALRQVLGTHVAQKGSLVSPDRLRFDFSHTKPMS 615

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARE--LFESKKEAYKVEILESIPAKENVTL 173
           ++E+  +E     ++  ++P + + ++ ++AR         E Y  E+            
Sbjct: 616 AEEIKAVEDMANAVLLENTPVVTRLMALDEARASGAMALFGEKYGDEVRVVSMGSTRPGA 675

Query: 174 YRQGEWFDLCRGPHVRSTG 192
            +     +LC G HV  TG
Sbjct: 676 NK-AWSVELCGGTHVTRTG 693


>gi|251798323|ref|YP_003013054.1| alanyl-tRNA synthetase [Paenibacillus sp. JDR-2]
 gi|247545949|gb|ACT02968.1| alanyl-tRNA synthetase [Paenibacillus sp. JDR-2]
          Length = 877

 Score = 63.6 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/149 (19%), Positives = 64/149 (42%), Gaps = 10/149 (6%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFSS 116
           ++E +     R   +  H+  H++ +A++ +  +     G ++  D   +DF      + 
Sbjct: 545 TVEAVVIRSVREDVIKNHTATHLLHKALKEVLGDHVNQAGSLVQADRLRFDFSHFGSITP 604

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
           +EL +IE+K+ E I   +P + +     +A+ +        K          + V + + 
Sbjct: 605 EELTEIERKVNEQIWIGTPVVIESKQIAEAKAMGAMALFGEKY--------GDIVRVVQV 656

Query: 177 GEW-FDLCRGPHVRSTGQVKKFFKLMKVA 204
           G +  +LC G HV +T Q+  F  + +  
Sbjct: 657 GNYSIELCGGCHVANTSQIGMFKLVSESG 685


>gi|312793514|ref|YP_004026437.1| alanyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii 177R1B]
 gi|312180654|gb|ADQ40824.1| alanyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii 177R1B]
          Length = 883

 Score = 63.6 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 70/169 (41%), Gaps = 30/169 (17%)

Query: 38  AVAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIG 97
           +V   +N ++             + T ++        H+  H++  A++ I  +     G
Sbjct: 547 SVVAKVNEELR------------LATMKN--------HTATHLLHSALRKILGQHAQQSG 586

Query: 98  P-IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEA 156
             +  D   +DF   +P S +++ +IEK +  +I +  P  K     + A ++  +    
Sbjct: 587 SQVTPDRLRFDFAHYEPLSEEQIIEIEKMVNNVIQQAIPVEKIVTDLDSALKMGATALFD 646

Query: 157 YKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKFFKLMKVA 204
            K   +        V + + G++  +LC G HV +TGQ+  F  + + +
Sbjct: 647 EKYSNV--------VRVIKIGDFSMELCGGTHVDNTGQIGMFKIISESS 687


>gi|260574639|ref|ZP_05842642.1| alanyl-tRNA synthetase [Rhodobacter sp. SW2]
 gi|259023056|gb|EEW26349.1| alanyl-tRNA synthetase [Rhodobacter sp. SW2]
          Length = 882

 Score = 63.6 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 64/158 (40%), Gaps = 14/158 (8%)

Query: 53  PVREGSI------EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFY 105
            V EG I      ++      R+     HS  H++ EA++    +     G     D   
Sbjct: 533 EVTEGQISQGQPAKLEVDHSRRAAIRANHSATHLLNEALRRALGDHVAQRGSLNAADRLR 592

Query: 106 YDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKAREL------FESKKEAYKV 159
           +DF   +  +  ELAQ+E ++  +I ++SP   + ++ + AR L       E   +  +V
Sbjct: 593 FDFSHAKGMTPSELAQVEAEVNAVIRQNSPVETRLMTPDDARGLGAQALFGEKYGDEVRV 652

Query: 160 EILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
             + ++          Q    +LC G HV   G++  F
Sbjct: 653 VSMGALAGSGK-GSDGQTYSLELCGGTHVARLGEIGSF 689


>gi|56418548|ref|YP_145866.1| seryl-tRNA synthetase [Geobacillus kaustophilus HTA426]
 gi|67461631|sp|Q5L3Y0|SYS_GEOKA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|56378390|dbj|BAD74298.1| seryl-tRNA synthetase [Geobacillus kaustophilus HTA426]
          Length = 424

 Score = 63.6 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 43/244 (17%), Positives = 90/244 (36%), Gaps = 22/244 (9%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAED----GSGVIFWHRKGWKIF 276
           G +     E+ ++      S E + H ++A  + L          GS  +F+   G ++ 
Sbjct: 115 GQSEEDNVEVRRWGEPRSFSFEPKPHWEIADRLGLLDFERAAKVAGSRFVFYKGLGARLE 174

Query: 277 QTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           + LI++M     D   YEE+  P ++++     +G    +  + F +        D   +
Sbjct: 175 RALINFMLDIHLDEFGYEEVLPPYLVNRASMIGTGQLPKFAEDAFHL--------DSEDY 226

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDA 391
            L P        +    + +  +LP+  A + + +R E   +     GL+R   F + + 
Sbjct: 227 FLIPTAEVPVTNLHRDEILAADDLPIYYAAYSACFRAEAGSAGRDTRGLIRQHQFNKVEL 286

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENI 447
             F   E  ++E  K+     +I +  G    +V L T              +W  +   
Sbjct: 287 VKFVKPEDSYDELEKLTRQAETILQRLGLPYRVVALCTGDLGFSAAKTYDIEVWLPSYGT 346

Query: 448 MKGV 451
            + +
Sbjct: 347 YREI 350


>gi|42519649|ref|NP_965579.1| seryl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
 gi|227889410|ref|ZP_04007215.1| seryl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
 gi|67461827|sp|Q74HZ5|SYS_LACJO RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|41583938|gb|AAS09545.1| seryl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
 gi|227850042|gb|EEJ60128.1| seryl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
          Length = 436

 Score = 63.6 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 76/188 (40%), Gaps = 9/188 (4%)

Query: 272 GWKIFQTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G  + + + ++ +    KD Y E+  P +++    Q +G +  +  +++ +   DD  K 
Sbjct: 170 GALLERAVSNFFLDENTKDGYTEVIPPYLVNDASMQGTGQFPKFTEDVYTIVDNDDPDKP 229

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFT 387
            R   L P      V  F   +    +LP+ +  F   +R+E   +     GL+R+  F 
Sbjct: 230 -RDLTLIPTAEVPLVNYFRGKILDGEQLPINVTAFSPAFRSEAGSAGRDTRGLIRMHEFR 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +      +E  ++E  K+ +    + +  G    +V LST              +W  
Sbjct: 289 KVEMVKIVDEESSWDELEKLTHNAEHLLQKLGLPYHVVALSTGDASFTSAKTYDLEVWMP 348

Query: 444 AENIMKGV 451
           A++  + +
Sbjct: 349 AQDKYREI 356


>gi|255028973|ref|ZP_05300924.1| alanyl-tRNA synthetase [Listeria monocytogenes LO28]
          Length = 520

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 61/143 (42%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFS 115
            ++++   +  R   +  H+  H++  A++    E     G ++  D   +DF      +
Sbjct: 189 DTVKLAVDKVKRRETIKNHTATHLLHRALKDTLGEHVNQAGSLVSPDRLRFDFSHFGQIT 248

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            +EL ++E+ + E I      + + +   +A+EL        K          + V + +
Sbjct: 249 EEELTKMEEIVNEKIWEQINVVIEEMPIAEAKELGAMALFGEKY--------GDIVRVVQ 300

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G++  +LC G HVR+T  +  F
Sbjct: 301 VGKYSIELCGGVHVRNTADIGLF 323


>gi|251794129|ref|YP_003008860.1| seryl-tRNA synthetase [Paenibacillus sp. JDR-2]
 gi|247541755|gb|ACS98773.1| seryl-tRNA synthetase [Paenibacillus sp. JDR-2]
          Length = 427

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 40/234 (17%), Positives = 83/234 (35%), Gaps = 22/234 (9%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIF 276
           G++     E+ +         E + H  LA+++ +          GS   F+   G ++ 
Sbjct: 115 GSSEEDNVEIRRNGEQTTFDFEPKAHWDLAQDLGILDFERAGKVTGSRFTFYRGLGARLE 174

Query: 277 QTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           + LIS+M     D   YEE+  P ++++     +G    +  ++F +  +D        +
Sbjct: 175 RALISFMMDLHSDQHGYEEVLPPYLVNRDSLIGTGQLPKFEEDLFKISDSD--------Y 226

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDA 391
            L P        +    + S  ELP     + S +R+E   +     GL+R   F + + 
Sbjct: 227 FLIPTAEVPVTNLHREEILSIEELPKHFVAYSSCFRSEAGAAGRDTRGLIRQHQFNKVEL 286

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKI----MVKLSTRPEKRVGSDALW 441
                 E+ ++E  K+      + +  G                  +     +W
Sbjct: 287 IKLAKPEESYDELEKMTANAEKVLQLLGLPYRVLALCTGDMGFTAAKTYDLEVW 340


>gi|118443475|ref|YP_879284.1| seryl-tRNA synthetase [Clostridium novyi NT]
 gi|166219868|sp|A0Q3T2|SYS_CLONN RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|118133931|gb|ABK60975.1| seryl-tRNA synthetase [Clostridium novyi NT]
          Length = 426

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 38/236 (16%), Positives = 85/236 (36%), Gaps = 22/236 (9%)

Query: 220 IYGTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWK 274
             G       E+ ++    +   E + H  +  ++D+          GS    +   G +
Sbjct: 115 PDGETDEDNIEIRKWGEPTKFDFESKAHWDIGTDLDILDFERGGKIAGSRFTVYKGLGAR 174

Query: 275 IFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           + + +I+Y          Y EI  P ++++     +G    +  + F V        +  
Sbjct: 175 LERAIINYFLDMHTIDHGYTEILPPYMVNRDSMTGTGQLPKFEEDAFKV--------ENN 226

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQD 389
            + L P        ++ + + +  +LP++ A + + +R E   +     GL+R   F + 
Sbjct: 227 GYFLIPTAEVPVTNMYRNEILNGDDLPIKHAAYSACFRAEAGSAGRDTRGLVRQHQFNKV 286

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALW 441
           +   F   EQ ++E  K+ N    + K  G    +V++                +W
Sbjct: 287 ELVKFVKPEQSYDELEKLTNDAEDVLKGLGLPYRVVRICKGDLGFTAALKYDIEVW 342


>gi|238784519|ref|ZP_04628527.1| Seryl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
 gi|238714582|gb|EEQ06586.1| Seryl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
          Length = 430

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 62/188 (32%), Gaps = 10/188 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M     +   Y+E   P +++      +G    +  ++F  K  ++   D
Sbjct: 170 ARMHRALSQFMLDLHTEKHGYQEAYVPYLVNHATLYGTGQLPKFGEDLFHTKPLEEE-SD 228

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
              +AL P        +    +     LP+++      +R+E         GL+R+  F 
Sbjct: 229 SSNYALIPTAEVPLTNLVRDEILEEESLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFD 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E       ++      + +        V L T              +W  
Sbjct: 289 KVEMVQITRPEDSMAALEELTGHAEKVLQLLELPYRKVLLCTGDMGFGSSKTYDLEVWLP 348

Query: 444 AENIMKGV 451
           A++  + +
Sbjct: 349 AQDTYREI 356


>gi|333008793|gb|EGK28253.1| seryl-tRNA synthetase [Shigella flexneri K-272]
 gi|333020323|gb|EGK39589.1| seryl-tRNA synthetase [Shigella flexneri K-227]
          Length = 430

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 63/188 (33%), Gaps = 10/188 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M     +   Y E   P +++Q     +G    +  ++F  +   +   D
Sbjct: 170 ARMHRALSQFMLDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLFHTRPLAEEA-D 228

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
              +AL P        +    +    +LP+++      +R+E         GL+R+  F 
Sbjct: 229 TSNYALIPTAEVPLTNLVRGEIIDEDDLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFD 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E       ++      + +  G     + L T              +W  
Sbjct: 289 KVEMVQIVRPEDSMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMGFGACKTYDLEVWIP 348

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 349 AQNTYREI 356


>gi|262066990|ref|ZP_06026602.1| histidine--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
 gi|291379296|gb|EFE86814.1| histidine--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
          Length = 413

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 67/426 (15%), Positives = 147/426 (34%), Gaps = 72/426 (16%)

Query: 270 RKGWK-------IFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQ--QSGHWDSYRANM 318
            KG K       +    IS + +++     Y+   TP   +  L++       D     M
Sbjct: 7   PKGTKDIIGEDAVKYIYISNVTQEMFENYGYKFAKTPIFEETDLFKRGIGEATDVVEKEM 66

Query: 319 FAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLH 378
           +  K   D     R+  L+P N    V  +       +E   R    GS++R E   +  
Sbjct: 67  YTFKDKGD-----RSITLRPENTASMVRCYLENSIYAKEDVSRFYYNGSMFRYERPQA-- 119

Query: 379 GLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD 438
              R R F Q    VF  K  + +   ++  +  +     G   +  ++        GS 
Sbjct: 120 --GRQREFNQIGVEVFGEKSPILDA--EVIAMGYNFLTKLGITDL--EVKINSVGSKGSR 173

Query: 439 ALW-DDAENIMKGVLDTIKNSSQDRINTGVL-------LGEGAFY--GPKF-EYILKDAI 487
            ++ +      +  LD +    +DRIN   L        G+  FY   P   +Y+ +D  
Sbjct: 174 TIYREKLVEHFQSHLDDMCEDCKDRINRNPLRLLDCKVDGDKDFYKSAPSIIDYLFEDER 233

Query: 488 GRDWQCGT----------------IQVDFNLPSRFNAFYVN------------SHS---E 516
               +                     +D+   + F                    +   E
Sbjct: 234 KHYEEVKKYLTIFGVKFTEDPTLVRGLDYYSSTVFEIVTNKLGSQGTVLGGGRYDNLLKE 293

Query: 517 KCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLK 576
                +        +ER + ++ +N+  ++P         +  +  + +E A +IA+ L+
Sbjct: 294 LGDKDIPAFGFAAGVERVMMLIGDNYPKDVPD------VYIAWLGENTIETAMKIADSLR 347

Query: 577 SHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
             ++ +  D+ ++ +   +++    +    II G+ E ++  + ++ F +   ++V + +
Sbjct: 348 KENVKVYVDYSSKGMKSHMKKADKLETRYCIILGEDELNKGIVLLKDFSTREQKEVKIEE 407

Query: 637 AIPILT 642
            I  + 
Sbjct: 408 IINHIK 413


>gi|315231483|ref|YP_004071919.1| histidyl-tRNA synthetase [Thermococcus barophilus MP]
 gi|315184511|gb|ADT84696.1| histidyl-tRNA synthetase [Thermococcus barophilus MP]
          Length = 437

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 51/255 (20%), Positives = 84/255 (32%), Gaps = 21/255 (8%)

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMK------GVL 452
           + F   LK   L     +   F   +         +       D A+  +K       +L
Sbjct: 196 EDFIAALKDFGLSDEAVEKVLFLIELKGKPDEILPKAYELFKSDKAKEELKKIEELFELL 255

Query: 453 DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
                     I+ G+  G   +    FE I  + +G     G  + D NL   F      
Sbjct: 256 KAYGVYDYALIDFGIARGFDYYTSIVFEAIAPNDLGIGSIGGGGRYD-NLIEVFG----- 309

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIV-TTITSSAVEYAQEI 571
                  P        G IER I I+ E+        LSP   +V           A EI
Sbjct: 310 -----GKPTPATGFAIG-IERLIPIL-ESKGLLPSFRLSPDVFVVYIGKELEVKAKAIEI 362

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
              L+   +  E D +   +   +      +IP+++I G ++ +E    IR   +   + 
Sbjct: 363 TQALRKAGIKAEYDLQGRKLRKALEYADKLEIPVVVILGKRDLAEGKATIRDMATGEQKS 422

Query: 632 VSLLDAIPILTKESL 646
           V++ + I    KE L
Sbjct: 423 VAI-EKIAKEVKEML 436


>gi|227524426|ref|ZP_03954475.1| histidyl-tRNA synthetase [Lactobacillus hilgardii ATCC 8290]
 gi|227088385|gb|EEI23697.1| histidyl-tRNA synthetase [Lactobacillus hilgardii ATCC 8290]
          Length = 430

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 65/424 (15%), Positives = 130/424 (30%), Gaps = 63/424 (14%)

Query: 269 HRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
             +  + +  +    R    D  Y+EI TP   +  ++ ++       +++   +  D  
Sbjct: 13  LPEEARKWTYVEETARMLFNDYRYQEIRTPMFENFDVFSRTS---GDTSDVVTKEMYDFK 69

Query: 328 IKDLRTFALKPMNCPGHVAVF--NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRG 385
            K  R  +L+P    G V  F  N       + PV++   GS++R E   S     R R 
Sbjct: 70  DKGDRHISLRPEGTAGVVRAFVENKLYGPEHQRPVKVFYMGSMFRYERPQS----GRQRE 125

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM--------------VKLSTRP 431
           F Q     F + E   +   ++  + + +   FG + I                + +   
Sbjct: 126 FHQIGVEDFGSDEPELDV--EVIAMGMDLLHHFGLKDIRLEINSLGDAASRAAYRQALID 183

Query: 432 EKRVGSDALWDDAENIMKG----VLDTIKNSSQDR-------INTGVLLGEGAFYGPKFE 480
                 D L  D++  +      VLD+     Q+        ++      +  F   K  
Sbjct: 184 YLDPHFDELSKDSQVRLHKNPLRVLDSKDKQDQEIVKDAPSILDYLNDDSKKHFERVK-- 241

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK---------------------CH 519
             L D +   +      V          F +   S+                        
Sbjct: 242 -KLLDTLHIPYVIDPDMVRGLDYYTHTIFEIMVDSKALGEGYTTICAGGRYNGLVEQLGG 300

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH 579
           P M        +ER +  ++ + +G     L  + A V  I         +I   L+++ 
Sbjct: 301 PEMPGIGFGLGMERLM--LLMDAQGVKFPVLDQLDAYVVGIGEQTSIETLKIVQALRANG 358

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
            + + D+ N     + +          I  G+ E    +  ++   S     V +   I 
Sbjct: 359 FAADRDYLNRKPKAQFKSADKLNAQYTITIGESELESHTANVKSMASGKEINVPIDKIIN 418

Query: 640 ILTK 643
              +
Sbjct: 419 DFDE 422


>gi|221632736|ref|YP_002521957.1| alanyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
 gi|221155742|gb|ACM04869.1| alanyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
          Length = 878

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/155 (23%), Positives = 64/155 (41%), Gaps = 11/155 (7%)

Query: 45  GKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDG 103
           G+V + S  V + S+  I   + R+     H+  H++  A++ +  E  V  G  +  D 
Sbjct: 532 GRVREGSIRVGQ-SVRAIVDAERRAAIRRNHTATHLLHAALRRVLGEHAVQAGSLVAPDR 590

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE 163
             +DF   +  S ++L +IE+ + E I RD     +YL    A           K     
Sbjct: 591 LRFDFSHHESVSPEQLRRIEEMVNEQIVRDLRVEVRYLPLRDALAEGAIALFGEKY---- 646

Query: 164 SIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
                + V +     +  +LC G HV  TG++  F
Sbjct: 647 ----GDTVRVVSIDGFSKELCGGTHVSHTGEIGAF 677


>gi|197301771|ref|ZP_03166841.1| hypothetical protein RUMLAC_00497 [Ruminococcus lactaris ATCC
           29176]
 gi|197299211|gb|EDY33741.1| hypothetical protein RUMLAC_00497 [Ruminococcus lactaris ATCC
           29176]
          Length = 879

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/138 (20%), Positives = 57/138 (41%), Gaps = 10/138 (7%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFS 115
            ++ +      R+L    HS  H++ +A++++        G  + ED   +DF      +
Sbjct: 548 DTVTLEVNAKNRALTERNHSATHLLQKALRTVLGSHVEQAGSFVNEDRLRFDFTHFSAVT 607

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            +EL ++E+ + E I      + + L  E+AR+         K          + V +  
Sbjct: 608 PEELKKVEEIVNEQIQNALEVVTKNLPIEEARKTGAQALFGEKY--------GDVVRVVD 659

Query: 176 QGEW-FDLCRGPHVRSTG 192
            G +  + C G HV++T 
Sbjct: 660 MGGFSVEFCGGTHVKNTS 677


>gi|268320022|ref|YP_003293678.1| hypothetical protein FI9785_1556 [Lactobacillus johnsonii FI9785]
 gi|262398397|emb|CAX67411.1| serS [Lactobacillus johnsonii FI9785]
          Length = 436

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 76/188 (40%), Gaps = 9/188 (4%)

Query: 272 GWKIFQTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G  + + + ++ +    KD Y E+  P +++    Q +G +  +  +++ +   DD  K 
Sbjct: 170 GALLERAVSNFFLDENTKDGYTEVIPPYLVNDASMQGTGQFPKFTEDVYTIVDNDDPDKP 229

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFT 387
            R   L P      V  F   +    +LP+ +  F   +R+E   +     GL+R+  F 
Sbjct: 230 -RDLTLIPTAEVPLVNYFRGKILDGEQLPINVTAFSPAFRSEAGSAGRDTRGLIRMHEFR 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +      +E  ++E  K+ +    + +  G    +V LST              +W  
Sbjct: 289 KVEMVKIVDEESSWDELEKLTHNAEHLLQKLGLPYHVVALSTGDASFTSAKTYDLEVWMP 348

Query: 444 AENIMKGV 451
           A++  + +
Sbjct: 349 AQDKYREI 356


>gi|224418366|ref|ZP_03656372.1| alanyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|253827685|ref|ZP_04870570.1| alanyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|313141896|ref|ZP_07804089.1| alanyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|253511091|gb|EES89750.1| alanyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|313130927|gb|EFR48544.1| alanyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
          Length = 853

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 33/153 (21%), Positives = 64/153 (41%), Gaps = 9/153 (5%)

Query: 53  PVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKE 111
           P+  G    I     R      HS  H++ +A++ +  +     G ++E +   +DF   
Sbjct: 538 PLEIGQEVWIEVSKDRLEIAKHHSATHLLHKALREVLGDHITQAGSLVESNRLRFDFSHP 597

Query: 112 QPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENV 171
           +  S +EL ++E  + E I + +P + + +  E A+          K          ENV
Sbjct: 598 KALSYEELNKVELLVNEKILKANPQICEVMGIEAAKSKGAMALFGEKY--------GENV 649

Query: 172 TLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVA 204
            +   G+  +LC G HV +T  +  F+ + +  
Sbjct: 650 RVISFGDSIELCGGIHVENTANIGSFYIVKESG 682


>gi|157825548|ref|YP_001493268.1| histidyl-tRNA synthetase [Rickettsia akari str. Hartford]
 gi|166228604|sp|A8GMY5|SYH_RICAH RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|157799506|gb|ABV74760.1| histidyl-tRNA synthetase [Rickettsia akari str. Hartford]
          Length = 415

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 71/426 (16%), Positives = 140/426 (32%), Gaps = 77/426 (18%)

Query: 269 HRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
               +K+   +IS  R   +   Y++++TP +    ++ +S       +++ + +     
Sbjct: 15  LPDDYKVHDYIISKARDVGVLYGYKQMSTPILEYTKVFNRS---MGESSDVISKEIYSFL 71

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
            K   + AL+P    G +  F      ++ LP++L   G V+R +   +     R R F 
Sbjct: 72  DKSNESVALRPEFTAGIIRSFISNGLQHK-LPLKLFSTGPVFRYDRPQA----GRQRQFH 126

Query: 388 QDD-----AHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWD 442
           Q +     A    T  +     + I   +            +    +R   +        
Sbjct: 127 QLNYEYIGAKGAITDAETLKLAIDILKALAIEQDTLLELNSLGCSESRSAYKQKLVEYLS 186

Query: 443 DAENIMKG------------VLDTIKNSSQDRINTGVLLGEGAFY--------------- 475
           D ++ +              +LD+     Q  +    +L E  +Y               
Sbjct: 187 DFKDQLSEESKIRMIKNPMRILDSKSEIDQKIVAYAPILSE--YYTDESKEYFDELIKYL 244

Query: 476 ---GPKFEYILKDAIGRDWQCGTI----------QVDFNLPSRFNAFYVNSHSEKCHPVM 522
              G K+    +   G D+ C T           Q       R++       +    P +
Sbjct: 245 DILGVKYSINPRLVRGLDYYCHTAFEFTTNKLGSQSTILAGGRYDGLSRIMGNNDDVPAI 304

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSI 582
                   IER I +M E     +          V  I  + + YA EI + L++ +++ 
Sbjct: 305 ---GFAAGIER-IALMREYDISEVKP------VFVLPIGDNNITYALEIVDKLRAQNIAT 354

Query: 583 ETDFRNETINYKIREHSIKKI-----PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
                 E +  KI +  ++++       II  GD+E    SI ++         V    A
Sbjct: 355 IV----EPLG-KIAK-RMQRVLNENAKFIIFIGDEEQENNSIKLKDLEKQEEYIVDFAKA 408

Query: 638 IPILTK 643
             +L K
Sbjct: 409 FELLKK 414


>gi|149196141|ref|ZP_01873197.1| alanyl-tRNA synthetase [Lentisphaera araneosa HTCC2155]
 gi|149140988|gb|EDM29385.1| alanyl-tRNA synthetase [Lentisphaera araneosa HTCC2155]
          Length = 899

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 63/146 (43%), Gaps = 11/146 (7%)

Query: 55  REGSIEIITPEDPRSLAVI-RHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQ 112
            EG   I++ +  R   +   H+  H++ +A+Q +  E     G  +  D   +DF   Q
Sbjct: 568 EEGEKVIVSYDIERRDKIRKNHTATHLLHKALQDLLGEHVEQKGSLVAADYLRFDFSHHQ 627

Query: 113 PFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVT 172
              +DE+ ++E  + E +  +S       + ++A+ +        K          ++V 
Sbjct: 628 GLKADEIEKLELLINEKVILNSAVETHLKNIDEAKAMGAMALFGEKY--------DDDVR 679

Query: 173 LYRQGEW-FDLCRGPHVRSTGQVKKF 197
           + +  ++  +LC G HV+ TG +  F
Sbjct: 680 VVKIDDFSLELCGGTHVKRTGDIGLF 705


>gi|238060458|ref|ZP_04605167.1| seryl-tRNA synthetase [Micromonospora sp. ATCC 39149]
 gi|237882269|gb|EEP71097.1| seryl-tRNA synthetase [Micromonospora sp. ATCC 39149]
          Length = 428

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 40/256 (15%), Positives = 86/256 (33%), Gaps = 16/256 (6%)

Query: 208 WRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDL----FHIAEDGS 263
             G+        +        + +  +       + RDH +L+R + L      +   GS
Sbjct: 101 RMGELPNLPADDVVPGGKEANRVVRAFGERPAIEKVRDHVELSRMLGLVDHERGVKLGGS 160

Query: 264 GVIFWHRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK 322
           G   +   G ++   L++++  + I   Y+ +  P +L       +G +  +  +++ + 
Sbjct: 161 GFWMYTGLGARLEWALLNWLIDQNIAAGYDFLLPPHLLLDTAGFAAGQFPKFYDDVYHL- 219

Query: 323 CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHG 379
              D     R   L P      +  +   +     LP+R   +   YR E +GS     G
Sbjct: 220 ---DRESAPRGQFLLPTAETAILGAYQDEILDTATLPLRRFAYTPCYRREAAGSHSDERG 276

Query: 380 LMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV----KLSTRPEKRV 435
            +R   F + +   F   EQ      ++   +  +    G            ++   K+ 
Sbjct: 277 TVRGHQFNKVEIFQFTLPEQADAALEQMVTHVEGLVARLGLHHQTSLLSAGDASASMKKT 336

Query: 436 GSDALWDDAENIMKGV 451
               +W  +    K V
Sbjct: 337 LDIEVWMPSTGKYKEV 352


>gi|260494400|ref|ZP_05814531.1| histidyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
 gi|260198546|gb|EEW96062.1| histidyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
          Length = 413

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 63/399 (15%), Positives = 132/399 (33%), Gaps = 63/399 (15%)

Query: 288 KDDYEEINTPQVLDQHLWQ--QSGHWDSYRANMFAVKCADDTIKDLR-TFALKPMNCPGH 344
              Y  + TP   +  L++       D     M+  K   D    LR       + C   
Sbjct: 34  NYGYNFVKTPIFEETELFKRGIGEATDVVEKEMYTFKDRGDRSITLRPENTASLVRCYLE 93

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
            A++     S      R    GS++R E   +     R R F Q    VF   E+     
Sbjct: 94  NAIYAKEEIS------RFYYNGSMFRYERPQA----GRQREFNQIGLEVFG--EKSPKVD 141

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            ++  +     +  G   + VK+++   K   +       E+  K  LD + +  +DRIN
Sbjct: 142 AEVIAIGYKFLEKLGISDLEVKINSVGSKESRTIYREKLIEHFSKH-LDDMCDDCKDRIN 200

Query: 465 TGVL-------LGEGAFY--GPKF-EYILKDAIGR----------------DWQCGTIQV 498
              L         +  FY   P   +++ +D                    +       +
Sbjct: 201 RNPLRLLDCKVDKDKDFYKSAPNIIDFLFEDERKHYEDVKKYLDVFGIKYTEDPTLVRGL 260

Query: 499 DFNLPSRFNAFYVN------------SHS---EKCHPVMIHRAVFGSIERFIGIMIENFK 543
           D+   + F                    +   E     +        +ER + ++ EN+ 
Sbjct: 261 DYYSSTVFEIVTNKLGSQGTVLGGGRYDNLLKELGDKDIPAVGFATGVERIMMLLGENYP 320

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
            N P         +  +  +  E A +IA  L+ + + +  D+  + +   +++     +
Sbjct: 321 KNNPD------VYIAWLGENTSETALKIAESLRDNDIKVYIDYSEKGMKSHMKKADKLSV 374

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
              II G+ E ++  + ++ F +   ++V + + +  + 
Sbjct: 375 RYCIILGEDELNKGIVLLKDFSTREQKEVKIEEIVNQIK 413


>gi|260459791|ref|ZP_05808045.1| seryl-tRNA synthetase [Mesorhizobium opportunistum WSM2075]
 gi|259034593|gb|EEW35850.1| seryl-tRNA synthetase [Mesorhizobium opportunistum WSM2075]
          Length = 434

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 46/353 (13%), Positives = 102/353 (28%), Gaps = 64/353 (18%)

Query: 210 GDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWH 269
            D +  ++  I G     +  + ++    E     D  + A+                  
Sbjct: 122 KDEHDNVVKHIVGEVPTRRNWVKEHFEIGEALGMMDFERAAKLSGSRFTVLKSGL----- 176

Query: 270 RKGWKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
               ++ + +  +M     +   YEEI  P ++   +   +     +  ++F  +  D  
Sbjct: 177 ---ARMERAIGQFMLDLHTNEHGYEEIIPPLMVRDEVLFGTNQLPKFEEDLFFTQHGDG- 232

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVR 384
                   L P        +    + ++ +LP+R       +R+E   +     G++R  
Sbjct: 233 -----RLGLIPTAEVPLTNLVREEITAHEKLPLRYTALTPCFRSEAGSAGRDTRGMLRQH 287

Query: 385 GFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDAL 440
            F + +      +E    E  ++      + K  G     + L T              +
Sbjct: 288 QFYKVELVSITDQESSLAEHERMTQCAEEVLKRLGLPFRTMVLCTGDMGFGARKTYDIEV 347

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDF 500
           W                          L G+ A+              R+    ++  DF
Sbjct: 348 W--------------------------LPGQNAY--------------REISSCSVCGDF 367

Query: 501 NLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI 553
               R +A Y +   +    V        ++ R +  +IEN++        P 
Sbjct: 368 Q-ARRMDARYKDKDGKGNRFVHTLNGSGTAVGRALIAVIENYQNEDGSVTIPE 419


>gi|255102013|ref|ZP_05330990.1| seryl-tRNA synthetase [Clostridium difficile QCD-63q42]
 gi|255307881|ref|ZP_05352052.1| seryl-tRNA synthetase [Clostridium difficile ATCC 43255]
          Length = 423

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 49/343 (14%), Positives = 124/343 (36%), Gaps = 29/343 (8%)

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
           + L  I+K M+    +D    +     ++ R++ +   E  K E+  +  +K    L ++
Sbjct: 9   ENLDCIKKAMERRGEKDFNLDEVVKLDDERRKILQEV-EVMKNEL--NTASKNIPNLIKE 65

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKV---AGAYWRGDSNRPMLSRI-YGTAWNTQQELT 232
           G+  +  +      + ++K   + +K       Y            +  G       E+ 
Sbjct: 66  GKDVENEKIKLKELSDKIKVIDQNLKEVEDKMEYLLMRIPNVPHPEVPQGETDEDNVEVR 125

Query: 233 QYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRRKI 287
            +        E + H ++  E+ +          GS    +   G ++ + L+++     
Sbjct: 126 TWGKTTTFDFESKAHWEIGTELGILDFETASKITGSRFTLYKGLGARLERALLNFYLDTN 185

Query: 288 K--DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
              + Y E+  P + +++ +  +G    +  +MF ++  D        + + P +     
Sbjct: 186 TKVNGYTEVIPPFMANRNSFLGTGQLPKFEEDMFKIEGMD--------YFMIPTSEVPLT 237

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFN 402
            +  + +  + +LP+    +   +R+E   +     GL+R   F + +       E+ +N
Sbjct: 238 NIHANEILKFEQLPINYTAYTPCFRSEAGSAGRDTRGLVRQHQFNKVEMVKIVAPEESYN 297

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRP----EKRVGSDALW 441
           E  K+ N   ++ +       +VK+ T              +W
Sbjct: 298 ELEKLTNNAETMLQLLNLPYRVVKICTGDLGFTASFKYDVEVW 340


>gi|157374457|ref|YP_001473057.1| alanine--tRNA ligase [Shewanella sediminis HAW-EB3]
 gi|205830208|sp|A8FSV6|SYA_SHESH RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|157316831|gb|ABV35929.1| Alanine--tRNA ligase [Shewanella sediminis HAW-EB3]
          Length = 874

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 56/143 (39%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFS 115
            S+E    +  R    + HS  H++  A++ +        G +++     +DF   +   
Sbjct: 544 DSLEANVDKKLRHRTELNHSVTHLLHAALRQLLGTHVTQKGSLVDSERLRFDFSHFEGVK 603

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            +EL  +E  +   I R+     + +  ++A+E         K          + V +  
Sbjct: 604 PEELKAVEDLVNTQIRRNHKLSAEVMDMDQAKEKGAMALFGEKY--------TDEVRVVT 655

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G++  +LC G HV  TG +  F
Sbjct: 656 MGDFSIELCGGTHVGRTGDIGLF 678


>gi|327480000|gb|AEA83310.1| alanyl-tRNA synthetase [Pseudomonas stutzeri DSM 4166]
          Length = 874

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/164 (18%), Positives = 58/164 (35%), Gaps = 11/164 (6%)

Query: 37  KAVAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAI 96
           KA    ++  + D         +E       R    + HS  H++  A++ I  E     
Sbjct: 524 KAGGAFLHHGIVDSGTLTTGAQVEATVDASVRQATALNHSATHLLHAALREILGEHVSQK 583

Query: 97  GPIIED-GFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKE 155
           G +++     +DF   +    ++L  +E ++   I R+S    +    + A+        
Sbjct: 584 GSLVDSQRLRFDFSHFEAIKPEQLRALEDRVNAEIRRNSAVEIEETDIDTAKAKGAMALF 643

Query: 156 AYKVEILESIPAKENVTLYRQGE--WFDLCRGPHVRSTGQVKKF 197
             K          + V +   G     +LC G HV  TG +  F
Sbjct: 644 GEKY--------GDTVRVLTMGGGFSVELCGGTHVNRTGDIGLF 679


>gi|257439266|ref|ZP_05615021.1| glycine--tRNA ligase [Faecalibacterium prausnitzii A2-165]
 gi|257198308|gb|EEU96592.1| glycine--tRNA ligase [Faecalibacterium prausnitzii A2-165]
          Length = 275

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 43/292 (14%), Positives = 90/292 (30%), Gaps = 46/292 (15%)

Query: 365 FGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
            G  +RNE +   +   R R F Q +   FC      +      +   +     G +K  
Sbjct: 1   MGKAFRNEITPG-NFTFRTREFEQMECEFFCKPGTDLDWFAYWKDYCENWLLSLGIKKEH 59

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI----NTGVLLGEGA------- 473
           ++L       +   A +  A   ++             I    N  +   + A       
Sbjct: 60  LRLRDHEPAEL---AFYSRATTDIEYAFPFTDWGELWGIADRTNYDLTRHQEASGKSLEY 116

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
           F     E+ +   I     C  + + F   +      V++  ++    ++H         
Sbjct: 117 FDSETNEHYIPYVIEPSLGCDRVALAFLCEAYDEEHLVDAKGKEDVRTVLH--------- 167

Query: 534 FIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
                       L   L+P +  V  ++    + A EI N L  +   ++ D    +I  
Sbjct: 168 ------------LHPALAPYKCAVLPLSKKLGDKAMEIRNELSKY-FMVDYDDTG-SIGK 213

Query: 594 KIREHSIKKIPIIIIC-----GDKE---ASERSIGIRRFGSTTTQKVSLLDA 637
           + R       P  I       GD+    A++  + +R   +    ++ + + 
Sbjct: 214 RYRREDEIGTPYCITVDFDTVGDEAKGIAADNCVTVRDRDTMEQVRMPISEL 265


>gi|205830255|sp|A4VJB3|SYA_PSEU5 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
          Length = 874

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/164 (18%), Positives = 58/164 (35%), Gaps = 11/164 (6%)

Query: 37  KAVAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAI 96
           KA    ++  + D         +E       R    + HS  H++  A++ I  E     
Sbjct: 524 KAGGAFLHHGIVDSGTLTTGAQVEATVDASVRQATALNHSATHLLHAALREILGEHVSQK 583

Query: 97  GPIIED-GFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKE 155
           G +++     +DF   +    ++L  +E ++   I R+S    +    + A+        
Sbjct: 584 GSLVDSQRLRFDFSHFEAIKPEQLRALEDRVNAEIRRNSAVEIEETDIDTAKAKGAMALF 643

Query: 156 AYKVEILESIPAKENVTLYRQGE--WFDLCRGPHVRSTGQVKKF 197
             K          + V +   G     +LC G HV  TG +  F
Sbjct: 644 GEKY--------GDTVRVLTMGGGFSVELCGGTHVNRTGDIGLF 679


>gi|146281753|ref|YP_001171906.1| alanyl-tRNA synthetase [Pseudomonas stutzeri A1501]
 gi|145569958|gb|ABP79064.1| alanyl-tRNA synthetase [Pseudomonas stutzeri A1501]
          Length = 900

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/164 (18%), Positives = 58/164 (35%), Gaps = 11/164 (6%)

Query: 37  KAVAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAI 96
           KA    ++  + D         +E       R    + HS  H++  A++ I  E     
Sbjct: 550 KAGGAFLHHGIVDSGTLTTGAQVEATVDASVRQATALNHSATHLLHAALREILGEHVSQK 609

Query: 97  GPIIED-GFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKE 155
           G +++     +DF   +    ++L  +E ++   I R+S    +    + A+        
Sbjct: 610 GSLVDSQRLRFDFSHFEAIKPEQLRALEDRVNAEIRRNSAVEIEETDIDTAKAKGAMALF 669

Query: 156 AYKVEILESIPAKENVTLYRQGE--WFDLCRGPHVRSTGQVKKF 197
             K          + V +   G     +LC G HV  TG +  F
Sbjct: 670 GEKY--------GDTVRVLTMGGGFSVELCGGTHVNRTGDIGLF 705


>gi|30249882|ref|NP_841952.1| alanyl-tRNA synthetase domain-containing protein [Nitrosomonas
           europaea ATCC 19718]
 gi|41018196|sp|Q82TF8|SYA_NITEU RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|30180919|emb|CAD85841.1| Alanyl-tRNA synthetase:DHHA1 domain [Nitrosomonas europaea ATCC
           19718]
          Length = 863

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/139 (17%), Positives = 54/139 (38%), Gaps = 10/139 (7%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKM 126
           R+     HS  H++  A++ +        G +++     +DF        +E+ Q+E  +
Sbjct: 545 RTNTAYNHSATHLLHAALRQVLGNHVTQKGSLVDASRLRFDFSHNSAMQENEIRQVENLV 604

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRG 185
              I ++     Q ++++ A +         K          + V +   G++  +LC G
Sbjct: 605 NAQIRKNHEVATQLMTYDDAVKQGAMALFGEKY--------GDTVRVVAMGDFSTELCGG 656

Query: 186 PHVRSTGQVKKFFKLMKVA 204
            HV  +G +  F  + +  
Sbjct: 657 THVSYSGDIGFFRIVAESG 675


>gi|83590513|ref|YP_430522.1| histidyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
 gi|123752887|sp|Q2RHW0|SYH_MOOTA RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|83573427|gb|ABC19979.1| histidyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
          Length = 423

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 61/426 (14%), Positives = 130/426 (30%), Gaps = 94/426 (22%)

Query: 276 FQTLISYMRRKIK-DDYEEINTPQ-----VLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
           +  L +  R   +   Y EI TP      + ++ +   S   +     M+      D   
Sbjct: 20  WYLLENTAREVSRLYGYREIRTPIFEHTELFNRGVGDTSDIVEK---EMYTFIDRGD--- 73

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
             R+  L+P      V  F       R LPV+L   G ++R     +     R+R F Q 
Sbjct: 74  --RSLTLRPEGTAPVVRAFVEHSLEARGLPVKLFYLGPMFRYGRPQA----GRLRQFHQF 127

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK----------IMVKLSTR--------- 430
               F +++   +   ++  L +  Y   G +              + + R         
Sbjct: 128 GVEAFGSRDPALDA--EVIALAMDFYTRLGLKDLELHLNSVGCPACRPAHREKLKAYLRP 185

Query: 431 -----PEKRVGSDA-----LWDDAENIMKGVL----------------------DTIKNS 458
                     G        ++D      + ++                      + +K  
Sbjct: 186 RLEELCPTCQGRFERNPLRIFDCKSPACQEIVREAPTVTASLCPDCAGHFHRVQEYLKAL 245

Query: 459 SQDRINTGVLLGEGAFYG-PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK 517
             + I    L+    +Y    FE ++K            Q       R++        ++
Sbjct: 246 GIEFILDEHLVRGLDYYTKTAFEIMVK--------GIGAQSSIGGGGRYDGLVAALGGKQ 297

Query: 518 CHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKS 577
              +     +    ER +  +    +G  P     +  +V T  +     A  +   L++
Sbjct: 298 VPGIGFGLGL----ERVLLAL--EIQGQEPPPEGGVDVLVVTAGTGVDLAAFRLLAGLRA 351

Query: 578 HHLSIETDF--RNETINYKIREHSIKKIPII--IICGDKEASERSIGIRRFGSTTTQKVS 633
             +  + D+  R+     K       + P    +I G++E +   + +RR  + + ++V 
Sbjct: 352 AGIRADKDYLERSLKGQMKYAN----RYPARMAVILGEEELARGRVSVRRLDAGSQEEVP 407

Query: 634 LLDAIP 639
           L   + 
Sbjct: 408 LAAVVD 413


>gi|331265541|ref|YP_004325171.1| histidyl-tRNA synthetase [Streptococcus oralis Uo5]
 gi|326682213|emb|CBY99830.1| histidyl-tRNA synthetase [Streptococcus oralis Uo5]
          Length = 426

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 60/404 (14%), Positives = 126/404 (31%), Gaps = 56/404 (13%)

Query: 276 FQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           +Q +  + R   K  +Y E+ TP       ++          ++   +  D   K  R  
Sbjct: 20  WQYVEGFAREIFKRYNYAEVRTPIF---EHYEVISRSVGDTTDIVTKEMYDFYDKGDRHI 76

Query: 335 ALKPMNCPGHVAVFNHGLKS-----YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
            L+P    G   V    +++       + P +    G ++R E   +     R+R F Q 
Sbjct: 77  TLRP---EGTAPVVRSYVENKLFAPEVQKPSKFYYMGPMFRYERPQA----GRLRQFHQI 129

Query: 390 DAHVFCTKEQM-FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWD------ 442
               F +       E + +    +      G +  +  L     +     AL D      
Sbjct: 130 GVECFGSSNPATDVETIAMAAHFLKEIGIQGVKLHLNTLGNPESRAAYRQALIDYLTPLK 189

Query: 443 -----DAENIMKG----VLDTIKNSSQDR-------INTGVLLGEGAFYGPK-------F 479
                D++  ++     VLD+ +   +         ++      +  F   +        
Sbjct: 190 ETLSKDSQRRLEENPLRVLDSKEKEDKVAVENAPSILDFLDEESQAHFDAVRQMLENLGV 249

Query: 480 EYILKDAI--GRDWQCGTIQVDFNLPSRFNAFYVN---SHSEKCHPVMIHRAVFG---SI 531
           +YI+   +  G D+   TI          +              +      A FG    +
Sbjct: 250 DYIIDTNMVRGLDYYNHTIFEFITEIEGNDLTVCAGGRYDGLVAYFGGPETAGFGFGLGV 309

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           ER + I+    +G      + +   +  +   A   A E+   L+      E D+ N  +
Sbjct: 310 ERLLLIL--EKQGVTLPIENALDVYIAVLGDGANVKALELVQALRQQGFKAERDYLNRKL 367

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
             + +   +     +I  G+ E     + ++   +    +VSL 
Sbjct: 368 KAQFKSADVFAAKTLITLGESEVESGQVTVKNNQTREEVQVSLD 411


>gi|170743900|ref|YP_001772555.1| alanyl-tRNA synthetase [Methylobacterium sp. 4-46]
 gi|205830146|sp|B0UGC4|SYA_METS4 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|168198174|gb|ACA20121.1| alanyl-tRNA synthetase [Methylobacterium sp. 4-46]
          Length = 886

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/139 (20%), Positives = 62/139 (44%), Gaps = 4/139 (2%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSS 116
           ++E+      R+     HS  H++ EA++ +  +     G ++      +DF   +P + 
Sbjct: 547 AVELRVDHARRAAIRAHHSATHLLHEALRQVLGDHVAQKGSLVSPERLRFDFSHPKPMND 606

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARE--LFESKKEAYKVEI-LESIPAKENVTL 173
           DE+A +E+    ++ ++ P + + ++ + A          E Y  E+ + S+   +    
Sbjct: 607 DEVAAVEEMANRVLLQNGPVVTKLMAVDDAIATGARALFGEKYGDEVRVVSMGEDQGGDG 666

Query: 174 YRQGEWFDLCRGPHVRSTG 192
            R+    +LC G HV  TG
Sbjct: 667 RRRTFSVELCGGTHVGRTG 685


>gi|296436275|gb|ADH18449.1| seryl-tRNA synthetase [Chlamydia trachomatis G/9768]
 gi|296438135|gb|ADH20296.1| seryl-tRNA synthetase [Chlamydia trachomatis G/11074]
 gi|297140636|gb|ADH97394.1| seryl-tRNA synthetase [Chlamydia trachomatis G/9301]
          Length = 428

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 38/249 (15%), Positives = 81/249 (32%), Gaps = 20/249 (8%)

Query: 210 GDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWH 269
            D     + + +G           ++   E  +  D +  A+       A    GV+   
Sbjct: 115 PDKTGNQVIKGHGEVPTFPFPPKHHMQLNEALQILDFKLPAKTTGSGWPAYCNEGVL--- 171

Query: 270 RKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
              W +   L++   ++    ++    P ++ + +   SG    +    + V+  D    
Sbjct: 172 -LEWALLTYLLN---KQQAHGFQLWLPPLLVKRDILFGSGQIPKFDGQYYRVEDGD---- 223

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG---SLHGLMRVRGF 386
             ++  L P          +  + + ++LP+    F   +R E         GL+RV  F
Sbjct: 224 --QSLFLIPTAEVVLNGFHSQEILNEQDLPLCYTAFTPCFRREAGAGGAHERGLVRVHQF 281

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG----SDALWD 442
            + +   F T EQ      K+ +++  I  +      +  LST              +W 
Sbjct: 282 HKVEMFAFTTPEQEEVVYQKMLHVVEEILSELQLPYQLSLLSTGDMSFTAKKTIDAEVWL 341

Query: 443 DAENIMKGV 451
             +     V
Sbjct: 342 PGQKAFYEV 350


>gi|27262200|gb|AAN87381.1| Seryl-tRNA synthetase [Heliobacillus mobilis]
          Length = 424

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 47/341 (13%), Positives = 111/341 (32%), Gaps = 41/341 (12%)

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L ++EK   +  A  +   ++  + E A  +    ++    + ++ +   + +    +  
Sbjct: 41  LVEVEKLKAQRNAVSAEIARKKKAKEDAEAMILEMRQVG--DQIKDL--DDQLAQIEEDM 96

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
              L   P++          +   V    W             GT  +    +  +    
Sbjct: 97  EKLLYYIPNIPHASVPVGLSEEENVEMRTW-------------GTPESFDFPVKAHWDLG 143

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTP 297
           EE +  D ++ A+          G         G ++ + +I+ M     +  Y EI  P
Sbjct: 144 EELDILDFQRGAKITGARFTVYKG--------LGARLERAIINLMMDTHAQRGYTEIFPP 195

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++++     +G    +  +MFAV            + L P        ++ + +    +
Sbjct: 196 FMVNKQSMFGTGQLPKFAEDMFAV--------SGTEYFLIPTAEVPVTNLYGNEILEAEQ 247

Query: 358 LPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           LP+    + + +R E   +     GL+R   F + +   F   +  + E  K+      I
Sbjct: 248 LPIYHCAYSACFRAEAGAAGRDTRGLIRQHQFNKVELVKFTHPDHSYEELEKLTADAEHI 307

Query: 415 YKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
            +  G    ++ L T              +W  +    + +
Sbjct: 308 LQLLGLPYRVITLCTGDMGFSSAKTYDIEVWLPSFQTYREI 348


>gi|167036460|ref|YP_001664038.1| seryl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|167038703|ref|YP_001661688.1| seryl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|300913738|ref|ZP_07131055.1| seryl-tRNA synthetase [Thermoanaerobacter sp. X561]
 gi|307723246|ref|YP_003902997.1| seryl-tRNA synthetase [Thermoanaerobacter sp. X513]
 gi|320114885|ref|YP_004185044.1| seryl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
 gi|238687557|sp|B0K0Z5|SYS_THEPX RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|238687674|sp|B0KAI8|SYS_THEP3 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|166852943|gb|ABY91352.1| seryl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|166855294|gb|ABY93702.1| seryl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|300890423|gb|EFK85568.1| seryl-tRNA synthetase [Thermoanaerobacter sp. X561]
 gi|307580307|gb|ADN53706.1| seryl-tRNA synthetase [Thermoanaerobacter sp. X513]
 gi|319927976|gb|ADV78661.1| seryl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
          Length = 423

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 84/234 (35%), Gaps = 22/234 (9%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHI----AEDGSGVIFWHRKGWKIF 276
           G +     E+ ++    +   E + H ++ +E+D+          GS   F+   G ++ 
Sbjct: 114 GDSDEDNVEIRRWGEPRKFDFEPKPHWEIGQELDILDFEAAARVTGSRFTFYKGLGARLE 173

Query: 277 QTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           + LI++M     +   Y E+  P ++ +     +G    +  + F V   D        +
Sbjct: 174 RALINFMLDLHIEKHGYTEVFPPFMVHRRSMFGTGQLPKFEEDAFKVYGTD--------Y 225

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDA 391
            L P        ++   +    +LP+    + + +R E   +     GL+R   F + + 
Sbjct: 226 FLIPTAEVPVTNMYRDTIIDGDKLPIYHCAYSACFRQEAGSAGRDTRGLIRQHQFNKVEL 285

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALW 441
             F   ++ + E  K+      + +  G    +V + T              +W
Sbjct: 286 VKFTEPDKSYEELEKMTRDAEEVLQALGLPYRVVVICTGDLGFTASKKYDIEVW 339


>gi|124026368|ref|YP_001015484.1| seryl-tRNA synthetase [Prochlorococcus marinus str. NATL1A]
 gi|166222761|sp|A2C409|SYS_PROM1 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|123961436|gb|ABM76219.1| Seryl-tRNA synthetase [Prochlorococcus marinus str. NATL1A]
          Length = 426

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 38/234 (16%), Positives = 86/234 (36%), Gaps = 20/234 (8%)

Query: 220 IYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAED----GSGVIFWHRKGWKI 275
           + G      +EL ++   +  +  ++H ++A +++L+          S  +   +   K+
Sbjct: 117 LEGKNEKDNKELRRWGEPISGNTLKEHWEIANQLNLWDSERSSVIAKSRFVTLFKHAAKL 176

Query: 276 FQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
            ++LI++M    IK  Y E+  P +++      SG    +    F     D         
Sbjct: 177 ERSLINFMLDLHIKKGYLEVLPPALVNTASLTGSGQLPKFAEESFRCADDD--------L 228

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDA 391
            L P       ++    +     LP++   +   +R E         GL+R+  F + + 
Sbjct: 229 WLTPTAEVPITSLHRGEIIPRDLLPLKYVAYSPCFRREAGSYGRDTRGLIRLHQFNKVEL 288

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALW 441
           + F T E   +   +I +   S+ ++      +++L T              +W
Sbjct: 289 YWFSTPETSEDALEQITSDAESVLQELELPYRVIQLCTGDLGFSAKKTYDLEVW 342


>gi|319897692|ref|YP_004135889.1| alanyl-tRNA synthetase [Haemophilus influenzae F3031]
 gi|317433198|emb|CBY81572.1| alanyl-tRNA synthetase [Haemophilus influenzae F3031]
          Length = 874

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 45/229 (19%), Positives = 87/229 (37%), Gaps = 36/229 (15%)

Query: 3   SDIKLT--FPDG-SIKNFPVHATGSDVAE----------SISRSLAKKAVAVAIN----- 44
           S  K+T  F DG S+++     +   + E           I  S    A  V  N     
Sbjct: 465 SQAKITALFYDGKSVESIEAGQSAVVILENTPFYAESGGQIGDSGYLSAQGVTFNVKDTQ 524

Query: 45  --GKVCDLSDPVREGSIEI------ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAI 96
             G+V      + +GS+++      I     R    + HS  H++  A++ I     V  
Sbjct: 525 KYGQVFGHIGELTQGSLKVGQSVNAIVDAKRRHNISLNHSATHLLHAALRQILGLHVVQK 584

Query: 97  GPIIEDG-FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKE 155
           G ++ D    +DF + +  + ++L++IE  + + I  + P     +  + A+        
Sbjct: 585 GSLVSDKALRFDFAQPEAITKEQLSEIEILVNQKIRANFPVQTDIMDIDSAKAKGAMALF 644

Query: 156 AYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKFFKLMKV 203
             K          + V +   G++  +LC G H + TG +  F  + + 
Sbjct: 645 GEKY--------GDKVRVLTMGDFSIELCGGIHAKRTGDIGLFKIITEN 685


>gi|313904037|ref|ZP_07837417.1| alanyl-tRNA synthetase [Eubacterium cellulosolvens 6]
 gi|313471186|gb|EFR66508.1| alanyl-tRNA synthetase [Eubacterium cellulosolvens 6]
          Length = 897

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 33/154 (21%), Positives = 68/154 (44%), Gaps = 11/154 (7%)

Query: 54  VREGSIEIITPEDPRSLAVIR-HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKE 111
           ++ G    +  +    LA+ R HS  H+M +A++ +        G   + D   +DF   
Sbjct: 562 LKTGDEVSLKVDAKNRLAIARNHSATHLMQKALREVLGTHVEQAGSYQDADRTRFDFSHF 621

Query: 112 QPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENV 171
           Q  +S+E+ ++E  + E I+       Q ++ ++A++         K          + V
Sbjct: 622 QAMTSEEIRKVEDMVNEKISEGLAVTTQVMTLDEAKKTGAMALFGEKY--------GDEV 673

Query: 172 TLYRQGEW-FDLCRGPHVRSTGQVKKFFKLMKVA 204
            + + G++  +LC G HV +T Q+ +F  L +  
Sbjct: 674 RVVKMGDFSTELCGGTHVENTQQIAQFKILSENG 707


>gi|153009317|ref|YP_001370532.1| alanyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188]
 gi|205830165|sp|A6X0E9|SYA_OCHA4 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|151561205|gb|ABS14703.1| alanyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188]
          Length = 885

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/140 (24%), Positives = 63/140 (45%), Gaps = 4/140 (2%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFS 115
            ++E+      R+     HS  H++ EA++          G  +  D   +DF   +P S
Sbjct: 546 DAVELKVDSVRRTRIRSNHSATHLLHEALRETLGSHVAQKGSLVAPDRLRFDFSHPKPIS 605

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKAREL--FESKKEAYKVEI-LESIPAKENVT 172
           ++EL Q+E    EII +++P   + ++ + A          E Y  E+ + S+   ++ +
Sbjct: 606 AEELTQVENLANEIILQNAPVSTRLMAVDDAIAEGAMALFGEKYGDEVRVVSMGTAKHGS 665

Query: 173 LYRQGEWFDLCRGPHVRSTG 192
              +    +LC G HVR TG
Sbjct: 666 KEGKAYSVELCGGTHVRQTG 685


>gi|153951507|ref|YP_001398463.1| alanyl-tRNA synthetase [Campylobacter jejuni subsp. doylei 269.97]
 gi|205830016|sp|A7H4N3|SYA_CAMJD RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|152938953|gb|ABS43694.1| alanyl-tRNA synthetase [Campylobacter jejuni subsp. doylei 269.97]
          Length = 842

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 71/155 (45%), Gaps = 10/155 (6%)

Query: 52  DPVREGSIEIITPEDPRSLAVIRH-SCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFD 109
           + ++ G+I     +  +   + RH S  H++  A++ I        G ++E +   +DF 
Sbjct: 525 EELKVGTIAHARIDAEKREQIARHHSATHLLHHALREILGSHVSQAGSLVESNKLRFDFT 584

Query: 110 KEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKE 169
             +  S +EL  IEK++ E+I   S  + + +  E+A++         K +         
Sbjct: 585 HHKALSKEELESIEKRVNEMIINSSEAILENMPLEEAKKSGAIALFNEKYQ--------G 636

Query: 170 NVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVA 204
           NV +   GE  +LC G HV++T Q+  F+ + +  
Sbjct: 637 NVRVLTLGESKELCGGTHVKNTAQIGSFYIVKESG 671


>gi|49481702|ref|YP_038439.1| alanyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|59798537|sp|Q6HDD7|SYA_BACHK RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|49333258|gb|AAT63904.1| alanine--tRNA ligase (alanyl-tRNA synthetase) [Bacillus
           thuringiensis serovar konkukian str. 97-27]
          Length = 880

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/161 (19%), Positives = 65/161 (40%), Gaps = 15/161 (9%)

Query: 44  NGK-----VCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP 98
           NG+     V +     ++ +++ I     R   V  H+  H++ +A++ +        G 
Sbjct: 531 NGQNLHKVVVEEGTLTKDAAVKAIIDTKNRGSVVKNHTATHLLHQALKDVLGTHVNQAGS 590

Query: 99  -IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAY 157
            +  +   +DF       +DEL +IE+ + E I           + E+A+E+        
Sbjct: 591 LVTSERLRFDFSHFGQVQADELEKIERIVNEKIWESIDVEISQKAIEEAKEMGAMALFGE 650

Query: 158 KVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
           K          + V + + G++  +LC G HV +T  +  F
Sbjct: 651 KY--------GDVVRVVQVGDYSLELCGGCHVDNTASIGIF 683


>gi|229019625|ref|ZP_04176437.1| Histidyl-tRNA synthetase 2 [Bacillus cereus AH1273]
 gi|229025865|ref|ZP_04182261.1| Histidyl-tRNA synthetase 2 [Bacillus cereus AH1272]
 gi|228735417|gb|EEL86016.1| Histidyl-tRNA synthetase 2 [Bacillus cereus AH1272]
 gi|228741673|gb|EEL91861.1| Histidyl-tRNA synthetase 2 [Bacillus cereus AH1273]
          Length = 476

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 75/465 (16%), Positives = 151/465 (32%), Gaps = 64/465 (13%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWK--------IFQTLISY 282
              Y   +   +  +       + L    E+   +     +G +        ++Q +   
Sbjct: 21  HHGYNTLVPTVQTVEAGVFLFLLRLKQFEEEL-NMSIQIPRGTQDILPGSVELWQYIEGQ 79

Query: 283 MRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPM-N 340
            R   +  +Y+EI TP        +          ++   +      +  R+  L+P   
Sbjct: 80  AREICRRYNYKEIRTPIF---EHTELFLRGVGDTTDIVQKEMYSFQDRGERSLTLRPEGT 136

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
            P   +   + +      P +L   G ++R E   +     R R F Q       + +  
Sbjct: 137 APVVRSYVENKMFGDATQPTKLYYIGQMFRYERPQA----GRYRQFVQFGIEAIGSNDPA 192

Query: 401 FNECLKIHNLIISIYKDFGFEKI---MVKLSTRPEKRVGSDALWDDAENIMKG------- 450
            +   ++  L +  Y+  G + I   +  L     ++   DAL    E  +         
Sbjct: 193 IDA--EVIALAVEFYRGMGLKNIKVVLNSLGDAASRQAHRDALIAHFEPRIGEFCSDCQS 250

Query: 451 --------VLDTIKNSSQDRINT-----GVLLGEGAFYGPK-----------FEYILKDA 486
                   +LD  K+ + + ++T       L  + A Y  K           FE      
Sbjct: 251 RLEKNPLRILDCKKDRNHELMSTAPSITEYLNEDSAVYYDKVQELLTMMDVPFEKDPNLV 310

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHS--------EKCHPVMIHRAVFGSIERFIGIM 538
            G D+   T+    +    F A    S          E   P M       SIER I  +
Sbjct: 311 RGLDYYQHTVFEIMSEAEGFGAITTLSGGGRYNGLVQEIGGPEMPGIGFAMSIERLIMAL 370

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
            +     LP+    I   V  +   A ++A +IA  L+   LS+E D+ +  +  + +  
Sbjct: 371 -KAENIELPIE-HSIDCYVVALGEKAKDHAAKIAFDLRKAGLSVEKDYLDRKMKAQFKSA 428

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
                  + + G+ E  +  I ++   +   ++V+L      + +
Sbjct: 429 DRLNAKYVAVLGEDELDKGIINLKDMATGGQEEVALDVFASYVAE 473


>gi|95928611|ref|ZP_01311358.1| alanyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
 gi|95135401|gb|EAT17053.1| alanyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
          Length = 880

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 39/222 (17%), Positives = 83/222 (37%), Gaps = 37/222 (16%)

Query: 9   FPDGSIKN-FPVHATGSDVAESI-------------SRSLAKKAVAVAINGKVCDL---- 50
             DG          T  ++  SI               +L  + V   I+  +  L    
Sbjct: 478 LKDGQQVESVSAGETV-EIITSITPFYGESGGQSGDGGTLTAEGVKATISETLKPLPNLH 536

Query: 51  --SDPVREGSI------EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIE 101
                + EG++      E+    + R+   + HS  HI+   +  +  +     G  +  
Sbjct: 537 VHVATIDEGTLSVGQAAELHVDVEQRTACALNHSATHILQAVLCEVLGDHVKQAGSQVTP 596

Query: 102 DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEI 161
           D   +DF      + +E+ Q+E+K+ + I  ++  +   ++ + A +   +     K   
Sbjct: 597 DRLRFDFIHFSALTPEEIQQVEEKVNQRIRENAGVMTDVMNTDDAVKAGATALFGEKY-- 654

Query: 162 LESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKFFKLMK 202
                  ++V + R G++  +LC G HV +TG +  F  + +
Sbjct: 655 ------GDSVRVVRMGDFSMELCGGTHVSATGNIGLFKIVQE 690


>gi|225175514|ref|ZP_03729508.1| histidyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
 gi|225168843|gb|EEG77643.1| histidyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
          Length = 471

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 74/451 (16%), Positives = 150/451 (33%), Gaps = 81/451 (17%)

Query: 256 FHIAEDGSGVIFWHRKGWK--------IFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQ 306
           F   ++   V+    +G +         +Q     +R   +   Y EI TP        +
Sbjct: 40  FCTVKESVIVLTKVPRGTRDILPGDIETWQFFEEKVRELCRLFGYSEIRTPIF---EHTE 96

Query: 307 QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL-PVRLAEF 365
                     ++ A +    T +  R+  L+P         +    K Y +  P+++   
Sbjct: 97  LFLRGVGEVTDIVAKEMYTFTDRGDRSLTLRPEGTASVARAYA-EHKLYGDAQPIKVYYI 155

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
           G ++R +   +     R R F Q    VF T E   +   ++  L +  ++  G  +  +
Sbjct: 156 GPMFRYDRPQA----GRYRQFHQFGVEVFGTSEPTLDA--EVMALSLVFFRSLGLTEFTL 209

Query: 426 KLST---RPEKRVGSDALWDDAENIMKGVLDTIKNSSQD--------------------R 462
           ++++      +R   D L ++ +  + G+     +                         
Sbjct: 210 EINSVGCPQCRRAYRDKLQEELKEKVDGLCPDCADRYDKNPLRILDCKNNKCQDITGDAP 269

Query: 463 INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI---QVDFNLPSRFNAFYVNSHSEKCH 519
           +  G L GE   +    +  + DA+G  +         +D+   + F             
Sbjct: 270 LMLGSLCGECDEHFTAVQEAM-DALGEQYVVNPRLVRGLDYYTKTAFEIVS--------- 319

Query: 520 PVMIHRAVFGSIERF----------------IGIMIE------NFKGNLPLWLSPIQAIV 557
           PV+  ++  G   R+                  I IE         G LP     +   V
Sbjct: 320 PVLGAQSSIGGGGRYDQLLSTIGGPDVPGIGFAIGIERVLLALEAAGTLPEAGGVLDVYV 379

Query: 558 TTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASER 617
            T  +     A  +A  L+   L+ E D+   ++  +++    K+   ++I GD+E    
Sbjct: 380 ATAGAVPAPVALRLAMDLRGAGLAAEKDYLGRSLKAQMKYADKKQAKFLVILGDEEMQRG 439

Query: 618 SIGIRRFGSTTTQKVSLLDAIPIL---TKES 645
              +R     + Q V+L D +  L    KE+
Sbjct: 440 QATVRDMKDGSQQDVALADLVGYLAGQVKEA 470


>gi|160915324|ref|ZP_02077537.1| hypothetical protein EUBDOL_01333 [Eubacterium dolichum DSM 3991]
 gi|158433123|gb|EDP11412.1| hypothetical protein EUBDOL_01333 [Eubacterium dolichum DSM 3991]
          Length = 874

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/137 (21%), Positives = 55/137 (40%), Gaps = 10/137 (7%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGF-YYDFDKEQPFS 115
             + +   E  R++    HSC H++  A++ +  E     G  + D +  +DF   +  S
Sbjct: 546 DEVSLKVDEKRRAVITSNHSCTHLLQSALKRVVGEHIAQAGSFVSDEYLRFDFTHFEKVS 605

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            ++L  IE  + E IA      K  +  E+A++             L      + V +  
Sbjct: 606 EEQLRNIENLVNEFIAGHYSVSKVEMPIEEAKQ--------SGATALFDEKYGDVVRVVS 657

Query: 176 QGE-WFDLCRGPHVRST 191
            G+   + C G HV +T
Sbjct: 658 MGDVSKEFCGGCHVNNT 674


>gi|15669189|ref|NP_247994.1| histidyl-tRNA synthetase [Methanocaldococcus jannaschii DSM 2661]
 gi|2501004|sp|Q58406|SYH_METJA RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|1591660|gb|AAB99003.1| histidyl-tRNA synthetase (hisS) [Methanocaldococcus jannaschii DSM
           2661]
          Length = 416

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 72/439 (16%), Positives = 134/439 (30%), Gaps = 108/439 (24%)

Query: 268 WHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADD 326
           +  +  K  + + + +R   +   Y+EI TP      L  +              +    
Sbjct: 14  FLPEEMKKRRFVENKLREVFERYGYKEILTPTFESFELIAKKT------GEEIRKQLYVF 67

Query: 327 TIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
                R  AL+P      V  + + LK+ ++ P+RL  F + +R E   +     R R F
Sbjct: 68  KDHGGREMALRPEMTSPVVRFYLNELKNLQK-PLRLYYFANCFRYERPQA----GRFREF 122

Query: 387 TQDDAHVFCTKEQM-------------------FNECLKIHNLIISIYKDFGFEKIMVKL 427
            Q    +   KE +                   F+  +    ++  + + F   +     
Sbjct: 123 WQMGCELIGCKEPLADAEVLNLAMDGLINIGLDFDVHIGHLGVLKGVLEKFNVSEEEEVK 182

Query: 428 STRPEKRVGSDALWDDAENIM-----------------KGVLDTIKN------------- 457
             R   +   D L      I+                 + VLD +K              
Sbjct: 183 IRRLIDKEDYDNLKIYLTQILGEEKKELIFEILKFKGSREVLDELKEILKDFPKSMEAIN 242

Query: 458 ----------SSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFN 507
                       +  IN G+  G   + G  FE   K   G    CG  + D NL   F 
Sbjct: 243 NLEEILEFVIHDKYTINLGIARGLDYYTGMVFEIYGK--KGAKQICGGGRYD-NLIETFG 299

Query: 508 AFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEY 567
                       P       +G    F  IM+     +    +     ++  +       
Sbjct: 300 ----------GEPTPAVGFAYG----FDRIMMNIDDLD----IEEESILIIPVKKDKELI 341

Query: 568 AQE--IANLLKSHHLSIETDFRNETINYKIREH-------SIKKIPIIIICGDKEASERS 618
            +   IA+ L+     +E     E +  K+R+          KK+   II G+KE +E  
Sbjct: 342 KKSLIIADKLRKAGKIVEL----EIMGRKLRKALDYANSRGFKKV---IIVGEKELNEGK 394

Query: 619 IGIRRFGSTTTQKVSLLDA 637
           + ++   +   + + + + 
Sbjct: 395 VTVKDMITGEQKLIGIDEL 413


>gi|319783192|ref|YP_004142668.1| seryl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317169080|gb|ADV12618.1| seryl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 434

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 45/353 (12%), Positives = 101/353 (28%), Gaps = 64/353 (18%)

Query: 210 GDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWH 269
            D +  ++  I G        + ++    E     D  + A+                  
Sbjct: 122 KDEHDNVVKHIVGKVPTRPNWVKEHFEIGEALGMMDFERAAKLSGSRFTVLKNGL----- 176

Query: 270 RKGWKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
               ++ + L  +M      +  YEE+  P ++  ++   +     +  ++F     +  
Sbjct: 177 ---ARMERALGQFMLDLHTTEHGYEEVIPPLMVKDNVLFGTNQLPKFEEDLFFTPHGEG- 232

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVR 384
                   L P        +    + ++ +LP+R       +R+E   +     G++R  
Sbjct: 233 -----RLGLIPTAEVPLTNLVREEITAHEKLPLRYTALTPCFRSEAGSAGRDTRGMLRQH 287

Query: 385 GFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDAL 440
            F + +      +E    E  ++      + K  G     + L T              +
Sbjct: 288 QFYKVELVSITDQESSLAEHERMTQCAEEVLKRLGLPFRTMTLCTGDMGFGARKTYDIEV 347

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDF 500
           W                          L G+ A+              R+    ++  DF
Sbjct: 348 W--------------------------LPGQNAY--------------REISSCSVCGDF 367

Query: 501 NLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI 553
               R +A Y +   +    V        ++ R +  +IEN++        P 
Sbjct: 368 Q-ARRMDARYKDKDGKGNRFVHTLNGSGTAVGRALIAVIENYQNEDGSVTIPE 419


>gi|238795841|ref|ZP_04639354.1| Seryl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
 gi|238720304|gb|EEQ12107.1| Seryl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
          Length = 430

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 62/188 (32%), Gaps = 10/188 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M     +   Y+E   P +++      +G    +  ++F  K  ++   D
Sbjct: 170 ARMHRALSQFMLDLHTEKHGYQEAYVPYLVNHATLYGTGQLPKFGEDLFHTKPLEEE-SD 228

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
              +AL P        +    +     LP+++      +R+E         GL+R+  F 
Sbjct: 229 SSNYALIPTAEVPLTNLVRDEILEEESLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFD 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E       ++      + +        V L T              +W  
Sbjct: 289 KVEMVQITRPEDSMAALEELTGHAEKVLQLLELPYRKVLLCTGDMGFGSSKTYDLEVWLP 348

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 349 AQNTYREI 356


>gi|256822655|ref|YP_003146618.1| alanyl-tRNA synthetase [Kangiella koreensis DSM 16069]
 gi|256796194|gb|ACV26850.1| alanyl-tRNA synthetase [Kangiella koreensis DSM 16069]
          Length = 875

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/145 (19%), Positives = 56/145 (38%), Gaps = 10/145 (6%)

Query: 55  REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQP 113
            +  +      + R   +  HS  H++  A++ I        G ++      +DF   +P
Sbjct: 543 NDAELTAEVDAERRQHTMRNHSATHLLHAALRDILGTHVTQKGSLVGPERLRFDFSNPEP 602

Query: 114 FSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTL 173
            + ++L QIE  + + I  +       +S ++A+E         K          + V +
Sbjct: 603 VTQEQLRQIEALVNQKIYENHAVEAATMSMDEAKEHGAMALFGEKY--------GDEVRV 654

Query: 174 YRQGEW-FDLCRGPHVRSTGQVKKF 197
                +  +LC G HV+ TG +  F
Sbjct: 655 LTMSPFSVELCGGTHVQRTGDIGAF 679


>gi|312875971|ref|ZP_07735960.1| alanyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
 gi|311797169|gb|EFR13509.1| alanyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
          Length = 883

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 41/191 (21%), Positives = 81/191 (42%), Gaps = 10/191 (5%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFS 115
            S+     E+ R   +  H+  H++  A++ I  +     G  +  D   +DF   +P S
Sbjct: 546 SSVVAKVDEELRLATMKNHTATHLLHSALRKILGQHAQQSGSQVTPDRLRFDFAHYEPLS 605

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            +++ +IEK +  +I +  P  K     + A ++  +     K   +        V + +
Sbjct: 606 EEQIIEIEKMVNNVIQQAIPVEKIVTDLDSALKMGATALFDEKYSNV--------VRVIK 657

Query: 176 QGEW-FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
            G++  +LC G HV +TGQ+  F  + + + A           +++Y    NTQQ L Q 
Sbjct: 658 IGDFSMELCGGTHVDNTGQIGMFKIISESSVAAGVRRIEAITGNKVYEFILNTQQTLKQL 717

Query: 235 LYFLEESEKRD 245
              ++ S   +
Sbjct: 718 RSKVKASTDSE 728


>gi|288561203|ref|YP_003424689.1| seryl-tRNA synthetase SerS [Methanobrevibacter ruminantium M1]
 gi|288543913|gb|ADC47797.1| seryl-tRNA synthetase SerS [Methanobrevibacter ruminantium M1]
          Length = 425

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/149 (16%), Positives = 52/149 (34%), Gaps = 11/149 (7%)

Query: 279 LISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKP 338
           +   +    +  Y  + TP  +   +  ++     +   ++ V        +     L  
Sbjct: 177 IQFALNELEERGYIPLQTPFFVKGEVAAETSELGEFEETLYKV--------ENEDLYLIA 228

Query: 339 MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFC 395
                  A+    + +  +LP+R     + +R E         G+ RV  F + +  +F 
Sbjct: 229 TAEQTLAALHRDEIINPEDLPMRYCALSTCFRKEAGSHGKDTLGIFRVHQFEKIEQFIFS 288

Query: 396 TKEQMFNECLKIHNLIISIYKDFGFEKIM 424
           T E+  NE  ++  +   IYK  G    +
Sbjct: 289 TPEESKNEHHRLLEVTEDIYKKLGLPYQI 317


>gi|257413376|ref|ZP_04742849.2| alanine--tRNA ligase [Roseburia intestinalis L1-82]
 gi|257203713|gb|EEV01998.1| alanine--tRNA ligase [Roseburia intestinalis L1-82]
          Length = 778

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 57/139 (41%), Gaps = 10/139 (7%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSDELAQIEKKM 126
           R+     HS  H++ +A++ +        G   +     +DF      + +EL ++EK +
Sbjct: 571 RAKICKNHSATHLLQKALREVLGTHVEQAGSYQDGERTRFDFSHFAAMTPEELEKVEKIV 630

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRG 185
            + IA   P     ++ ++A++         K          E V +   G++  + C G
Sbjct: 631 NDKIAEAIPVRTDVMTVDEAKKTGAMALFGEKY--------GETVRVVSMGDFSKEFCGG 682

Query: 186 PHVRSTGQVKKFFKLMKVA 204
            HV++T ++  F  + +  
Sbjct: 683 THVKNTSEIAAFKIISENG 701


>gi|71083347|ref|YP_266066.1| alanine-tRNA ligase [Candidatus Pelagibacter ubique HTCC1062]
 gi|83305853|sp|Q4FMX6|SYA_PELUB RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|71062460|gb|AAZ21463.1| alanine-tRNA ligase [Candidatus Pelagibacter ubique HTCC1062]
          Length = 889

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 45/212 (21%), Positives = 80/212 (37%), Gaps = 11/212 (5%)

Query: 45  GKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII-EDG 103
           GKV   S  +++ ++E+      R+     HS  H++ EA++ +  E     G ++  D 
Sbjct: 535 GKVKRGSVKLKD-NVELKIDTQRRNNIRAYHSATHLLHEALRRVLGEHVTQKGSLVQSDR 593

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE--LFESKKEAYKVEI 161
             +DF   +P S +E+ +IE  +  II + S    + ++ ++A E        E Y  E+
Sbjct: 594 LRFDFSHMKPISDEEIRKIEHYVNSIIEKKSEVKTRIMTPKEAVENGALALFGEKYGDEV 653

Query: 162 LESIPAKENVTLYRQGEWFDLCRGPHVRST---GQVKKFFKLMKVAGAYWRGDSNRPMLS 218
                  E    +      +LC G HV +T   G+ K   +    AG           L 
Sbjct: 654 RVLSMGDEEGKFF----STELCGGTHVVNTADIGKFKIISQSSIAAGVRRVEALRDAQLI 709

Query: 219 RIYGTAWNTQQELTQYLYFLEESEKRDHRKLA 250
                  N      Q    + +  +    KL 
Sbjct: 710 DFLKEKENQSNLSDQKNEAVIKELETKIIKLG 741


>gi|116872933|ref|YP_849714.1| alanyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|123461085|sp|A0AIV3|SYA_LISW6 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|116741811|emb|CAK20935.1| alanyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
          Length = 879

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/209 (16%), Positives = 79/209 (37%), Gaps = 11/209 (5%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFS 115
            ++++   +  R   +  H+  H++  A++    E     G ++  D   +DF      +
Sbjct: 548 DTVKLAVDKVKRRETIKNHTATHLLHRALKDTLGEHVNQAGSLVSPDRLRFDFSHFGQIT 607

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            +EL ++E+ + E I      + + +   +A+EL        K          + V + +
Sbjct: 608 EEELTKMEEIVNEKIWEQINVVIEEMPIAEAKELGAMALFGEKY--------GDVVRVVQ 659

Query: 176 QGEW-FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
            G++  +LC G HVR+T  +  F  + +                  Y      +  L   
Sbjct: 660 VGKYSIELCGGVHVRNTADIGLFKIVSETGIGAGTRRIEAVTGKEAYRFVTEQENTLKHT 719

Query: 235 LYFLEESEKRDHRKLAR-EMDLFHIAEDG 262
              L+ + K   +K+ + + DL  +  + 
Sbjct: 720 ANLLKATTKEAPQKVEQLQADLREVKREN 748


>gi|313623696|gb|EFR93847.1| alanyl-tRNA synthetase [Listeria innocua FSL J1-023]
          Length = 879

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 61/143 (42%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFS 115
            ++++   +  R   +  H+  H++  A++    E     G ++  D   +DF      +
Sbjct: 548 DTVKLAVDKVKRRETIKNHTATHLLHRALKDTLGEHVNQAGSLVSPDRLRFDFSHFGQIT 607

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            +EL ++E+ + E I      + + +   +A+EL        K          + V + +
Sbjct: 608 EEELTKMEEIVNEKIWEQINVVIEEMPIAEAKELGAMALFGEKY--------GDVVRVVQ 659

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G++  +LC G HVR+T  +  F
Sbjct: 660 VGKYSIELCGGVHVRNTADIGLF 682


>gi|261366901|ref|ZP_05979784.1| alanine--tRNA ligase [Subdoligranulum variabile DSM 15176]
 gi|282571016|gb|EFB76551.1| alanine--tRNA ligase [Subdoligranulum variabile DSM 15176]
          Length = 886

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/162 (21%), Positives = 73/162 (45%), Gaps = 13/162 (8%)

Query: 46  KVCDLSDPVREGSIEIITPEDPRSLAVIR-HSCAHIMAEAVQSIWPEVQVAIGPIIEDGF 104
           ++ D +  V +     +  ++ R +A+ R H+  H++ +A++ +  E     G   +D  
Sbjct: 543 ELLDGTIKVGDEVTAFV--DEARRMAICRNHTATHLLQKALREVLGEHVHQAGSYQDDKI 600

Query: 105 -YYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE 163
            ++DF      + +EL ++E+++ E I    P + Q L  E+A+++        K     
Sbjct: 601 THFDFTHFSAVTPEELTEVERRVNEKIFASLPVVIQNLPIEEAKKMGAMALFGEKY---- 656

Query: 164 SIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKFFKLMKVA 204
                  V +   G W  + C G HV++T Q+  F  L + +
Sbjct: 657 ----GSVVRVVDAGGWSTEFCGGTHVQNTSQIGCFKILSESS 694


>gi|313608702|gb|EFR84533.1| alanyl-tRNA synthetase [Listeria monocytogenes FSL F2-208]
          Length = 879

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 61/143 (42%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFS 115
            ++++   +  R   +  H+  H++  A++    E     G ++  D   +DF      +
Sbjct: 548 DTVKLAVDKVKRRETIKNHTATHLLHRALKDTLGEHVNQAGSLVSPDRLRFDFSHFGQIT 607

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            +EL ++E+ + E I      + + +   +A+EL        K          + V + +
Sbjct: 608 EEELTKMEEIVNEKIWEQINVVIEEMPIAEAKELGAMALFGEKY--------GDVVRVVQ 659

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G++  +LC G HVR+T  +  F
Sbjct: 660 VGKYSIELCGGVHVRNTADIGLF 682


>gi|217964349|ref|YP_002350027.1| alanyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|217333619|gb|ACK39413.1| alanyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|307571085|emb|CAR84264.1| alaS [Listeria monocytogenes L99]
          Length = 879

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 61/143 (42%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFS 115
            ++++   +  R   +  H+  H++  A++    E     G ++  D   +DF      +
Sbjct: 548 DTVKLAVDKVKRRETIKNHTATHLLHRALKDTLGEHVNQAGSLVSPDRLRFDFSHFGQIT 607

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            +EL ++E+ + E I      + + +   +A+EL        K          + V + +
Sbjct: 608 EEELTKMEEIVNEKIWEQINVVIEEMPIAEAKELGAMALFGEKY--------GDVVRVVQ 659

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G++  +LC G HVR+T  +  F
Sbjct: 660 VGKYSIELCGGVHVRNTADIGLF 682


>gi|329955323|ref|ZP_08296231.1| histidine--tRNA ligase [Bacteroides clarus YIT 12056]
 gi|328525726|gb|EGF52750.1| histidine--tRNA ligase [Bacteroides clarus YIT 12056]
          Length = 458

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/203 (13%), Positives = 73/203 (35%), Gaps = 19/203 (9%)

Query: 442 DDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFN 501
           +++E I+K  L T+   ++  ++  +  G   + G  FE    D        G      N
Sbjct: 273 EESEFILKT-LSTLGLKNEIELDLTLARGLNYYTGAIFEVKALDVQIGSITGGGR--YDN 329

Query: 502 LPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM--IENFKGNLPLWLSPIQAIVTT 559
           L   F    V+              +    +R   ++  +E +       ++  Q +   
Sbjct: 330 LTGVFGMAGVSGVG-----------ISFGADRIFDVLNQLELYPKEA---VNGTQLLFIN 375

Query: 560 ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSI 619
                  ++  +   +++  +  E    +  +  ++   + K IP + + G+ E +E  +
Sbjct: 376 FGEKEAAFSMNVLAQVRAAGIRAEIFPDSSKMKKQMSYANSKMIPFVALVGENEMNEGKV 435

Query: 620 GIRRFGSTTTQKVSLLDAIPILT 642
            ++   +   + V+  + +  L+
Sbjct: 436 TLKNMETGEQKSVTPEELVSELS 458


>gi|315282412|ref|ZP_07870831.1| alanyl-tRNA synthetase [Listeria marthii FSL S4-120]
 gi|313613946|gb|EFR87671.1| alanyl-tRNA synthetase [Listeria marthii FSL S4-120]
          Length = 864

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 61/143 (42%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFS 115
            ++++   +  R   +  H+  H++  A++    E     G ++  D   +DF      +
Sbjct: 533 DTVKLAVDKVKRRETIKNHTATHLLHRALKDTLGEHVNQAGSLVSPDRLRFDFSHFGQIT 592

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            +EL ++E+ + E I      + + +   +A+EL        K          + V + +
Sbjct: 593 EEELTKMEEIVNEKIWEQINVVIEEMPIAEAKELGAMALFGEKY--------GDVVRVVQ 644

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G++  +LC G HVR+T  +  F
Sbjct: 645 VGKYSIELCGGVHVRNTADIGLF 667


>gi|290893863|ref|ZP_06556841.1| alanyl-tRNA synthetase [Listeria monocytogenes FSL J2-071]
 gi|290556580|gb|EFD90116.1| alanyl-tRNA synthetase [Listeria monocytogenes FSL J2-071]
          Length = 879

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 61/143 (42%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFS 115
            ++++   +  R   +  H+  H++  A++    E     G ++  D   +DF      +
Sbjct: 548 DTVKLAVDKVKRRETIKNHTATHLLHRALKDTLGEHVNQAGSLVSPDRLRFDFSHFGQIT 607

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            +EL ++E+ + E I      + + +   +A+EL        K          + V + +
Sbjct: 608 EEELTKMEEIVNEKIWEQINVVIEEMPIAEAKELGAMALFGEKY--------GDVVRVVQ 659

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G++  +LC G HVR+T  +  F
Sbjct: 660 VGKYSIELCGGVHVRNTADIGLF 682


>gi|149198613|ref|ZP_01875657.1| seryl-tRNA synthetase [Lentisphaera araneosa HTCC2155]
 gi|149138328|gb|EDM26737.1| seryl-tRNA synthetase [Lentisphaera araneosa HTCC2155]
          Length = 425

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/233 (14%), Positives = 78/233 (33%), Gaps = 21/233 (9%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIF 276
           G       E+ ++    E     + H  L + +D+  +       GSG   W   G ++ 
Sbjct: 114 GLTEEDNPEVRRWGTKPEFDFAPQAHWDLGQNLDILDLPRAAKISGSGFYLWKGAGARLE 173

Query: 277 QTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFA 335
           + LI++ + +  ++ Y+E   P V++      +G    +   ++                
Sbjct: 174 RALINFFLDQNTENGYKEAWVPFVVNPKAMTGTGQLPKFAEEIY--------HAPEDNLY 225

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE---PSGSLHGLMRVRGFTQDDAH 392
           L P        +    +   +ELP+    +   +R E         G++RV  F++ +  
Sbjct: 226 LVPTAEVPVTNIHADEILDAKELPIAYTAYTPCFRREAGAAGKDSRGILRVHQFSKVEMV 285

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALW 441
            F      + E   +      + +  G    +++L +              +W
Sbjct: 286 KFVEPSTSYTELEMLLADAEHLLQQLGLHYRVIELCSGDLGFSAARCYDIEVW 338


>gi|297182947|gb|ADI19095.1| histidyl-tRNA synthetase [uncultured alpha proteobacterium
           HF0070_34A12]
          Length = 420

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 60/394 (15%), Positives = 129/394 (32%), Gaps = 59/394 (14%)

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV-AV 347
             ++E+ TP        +         +++   +  + T +   T  L+P N  G V A+
Sbjct: 35  YGFQEMATPMF---EFAEVFSRPLGDSSDVVTKETYNFTDRGGETLTLRPENTAGVVRAM 91

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD------------DAHVF- 394
            ++GL   + LP++    G ++R E         R+R F Q             DA +  
Sbjct: 92  ISNGLT--QSLPLKFFYAGPMFRYERPQK----GRMRQFHQIGIEYLGLCDGLADAEIIG 145

Query: 395 --------------CT-------KEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
                         CT         +            ++ ++    E    +L++ P +
Sbjct: 146 CGARILDDLGVLDRCTLHLNSLGDSESRQAYRAALVDFLNAHEADLSEDSRTRLTSNPLR 205

Query: 434 RVGSDALWDDAENIMKGVLDT-IKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ 492
            + S    D A       LD  + + S+   +      +GA  G  + +      G D+ 
Sbjct: 206 ILDSKDAGDRAIIAEAPSLDAFLNDGSRRHFDNVTGALDGA--GISWSFDPLLVRGLDYY 263

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAV-----FGSIERFIGIMIENFKGNLP 547
           C T               +          M+         + +    + +++ + +   P
Sbjct: 264 CHTAFEFITDALGAQGTVLGGGRYDGLSEMLGGPPVPGVGWAAGVERLAMLVGDVEPAAP 323

Query: 548 LWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIII 607
                 +  V  +   A   A  +A  L+   ++++       I  ++++     + I +
Sbjct: 324 ------RVAVMPMDGDAEGAAFALAESLRGAGIAVDLPAGGA-IGKRLKKADRAGVRIAV 376

Query: 608 ICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           I G  E +  S  IR  G+   ++V   +   +L
Sbjct: 377 ILGSDEVAGGSAQIRDLGAGRQREVPQAELASVL 410


>gi|261403411|ref|YP_003247635.1| histidyl-tRNA synthetase [Methanocaldococcus vulcanius M7]
 gi|261370404|gb|ACX73153.1| histidyl-tRNA synthetase [Methanocaldococcus vulcanius M7]
          Length = 414

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 72/426 (16%), Positives = 137/426 (32%), Gaps = 74/426 (17%)

Query: 268 WHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADD 326
           +  +  K  + + + +R   +   Y+EI TP      L  +              +    
Sbjct: 11  FLPEEMKKRRFVENKLREVFERYGYDEILTPTFESFELIAKKT------GEEIRKQLYVF 64

Query: 327 TIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
                R  AL+P      V  + + LK+ ++ P+RL  F + +R E   +     R R F
Sbjct: 65  KDHGGREMALRPEMTSPVVRFYLNELKNLQK-PLRLYYFANCFRYERPQA----GRFREF 119

Query: 387 TQD------------DAHVFCTKEQMFNEC---LKIHNLIISIYKDFGFEKIMVKLSTRP 431
            Q             DA V                +H   + + K    E  + +     
Sbjct: 120 WQMGCELIGCKNAIADAEVLNLAMDGLINIGLDFDVHIGHLGVLKGVLEEFNVSEEEEVK 179

Query: 432 EKRVGSDALWDDAENIMKGVL---------DTIKNSSQDRINTGVLLGEGAFYGPK---- 478
            +R+     +++ E  +  +L         + +K      I   +      F  PK    
Sbjct: 180 IRRLIDKEDYENLEIYLTQILGEEKKELIFEILKFKGGKEILDELKEILKDF--PKSVEA 237

Query: 479 -------FEYILKD--------AIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVM 522
                   E+++ D        A G D+  G + ++     ++         +       
Sbjct: 238 VNNLEEILEFVIHDKYIINFGIARGLDYYTGMVFEIYGKKGAKQICGGGRYDNLIETFGN 297

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQE---IANLLKSHH 579
           I     G    F  IM+          +   + +V  +     E  +E   IAN L+   
Sbjct: 298 ISVPAVGFAYGFDRIMMNIDDLE----IEEEKILVIPVKKD-KELIKESLLIANKLRKAG 352

Query: 580 LSIETDFRNETINYKIREH----SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
             +E     E +  K+R+     + K    +II G+KE +E  I ++   +   + V + 
Sbjct: 353 KIVEF----EIMGRKLRKALDYANSKGFKKVIIVGEKELNEGKITLKDMITGEQKLVDIT 408

Query: 636 DAIPIL 641
           D   I 
Sbjct: 409 DLDKIF 414


>gi|126700456|ref|YP_001089353.1| seryl-tRNA synthetase [Clostridium difficile 630]
 gi|115251893|emb|CAJ69728.1| Seryl-tRNA synthetase 1 (Seryl-tRNA(Ser/Sec) synthetase 1)
           (Serine--tRNA ligase 1) (SerRS 1) [Clostridium
           difficile]
          Length = 423

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 49/343 (14%), Positives = 124/343 (36%), Gaps = 29/343 (8%)

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
           + L  I+K M+    +D    +     ++ R++ +   E  K E+  +  +K    L ++
Sbjct: 9   ENLDCIKKAMERRGEKDFNLDEVVKLDDERRKILQEV-EVMKNEL--NTASKNIPNLIKE 65

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKV---AGAYWRGDSNRPMLSRI-YGTAWNTQQELT 232
           G+  +  +      + ++K   + +K       Y            +  G       E+ 
Sbjct: 66  GKDVENEKIKLKELSDKIKVIDQNLKEVEDKMEYLLMRIPNVPHPEVPQGETDEDNVEVR 125

Query: 233 QYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRRKI 287
            +        E + H ++  E+ +          GS    +   G ++ + L+++     
Sbjct: 126 TWGKTTTFDFESKAHWEIGTELGILDFETASKITGSRFTLYKGLGARLERALLNFYLDTN 185

Query: 288 K--DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
              + Y E+  P + +++ +  +G    +  +MF ++  D        + + P +     
Sbjct: 186 TKVNGYTEVIPPFMANRNSFLGTGQLPKFEEDMFKIEGLD--------YFMIPTSEVPLT 237

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFN 402
            +  + +  + +LP+    +   +R+E   +     GL+R   F + +       E+ +N
Sbjct: 238 NIHANEILKFEQLPINYTAYTPCFRSEAGSAGRDTRGLVRQHQFNKVEMVKIVAPEESYN 297

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRP----EKRVGSDALW 441
           E  K+ N   ++ +       +VK+ T              +W
Sbjct: 298 ELEKLTNNAETMLQLLNLPYRVVKICTGDLGFTASFKYDVEVW 340


>gi|307707792|ref|ZP_07644270.1| histidyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
 gi|307616174|gb|EFN95369.1| histidyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
          Length = 426

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 60/404 (14%), Positives = 126/404 (31%), Gaps = 56/404 (13%)

Query: 276 FQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           +Q +  + R   K  +Y E+ TP       ++          ++   +  D   K  R  
Sbjct: 20  WQYVEGFAREIFKRYNYAEVRTPIF---EHYEVISRSVGDTTDIVTKEMYDFYDKGDRHI 76

Query: 335 ALKPMNCPGHVAVFNHGLKS-----YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
            L+P    G   V    +++       + P +    G ++R E   +     R+R F Q 
Sbjct: 77  TLRP---EGTAPVVRSYVENKLFAPEVQKPSKFYYMGPMFRYERPQA----GRLRQFHQI 129

Query: 390 DAHVFCTKEQM-FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWD------ 442
               F +       E + +    +      G +  +  L     +     AL D      
Sbjct: 130 GVECFGSSNPATDVETIAMAAHFLKEIGIQGVKLHLNTLGNPESRAAYRQALIDYLTPLK 189

Query: 443 -----DAENIMKG----VLDTIKNSSQDR-------INTGVLLGEGAFYGPK-------F 479
                D++  ++     VLD+ +   +         ++      +  F   +        
Sbjct: 190 ETLSKDSQRRLEENPLRVLDSKEKEDKVAVENAPSILDFLDEESQAHFDAVRQMLENLGV 249

Query: 480 EYILKDAI--GRDWQCGTIQVDFNLPSRFNAFYVN---SHSEKCHPVMIHRAVFG---SI 531
           +YI+   +  G D+   TI          +              +      A FG    +
Sbjct: 250 DYIIDTNMVRGLDYYNHTIFEFITEIEGNDLTVCAGGRYDGLVSYFGGPETAGFGFGLGV 309

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           ER + I+    +G      + +   +  +   A   A E+   L+      E D+ N  +
Sbjct: 310 ERLLLIL--EKQGVALPIENALDVYIAVLGDGANVKALELVQALRQQGFKAERDYLNRKL 367

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
             + +   +     +I  G+ E     + ++   +    +VSL 
Sbjct: 368 KAQFKSADVFAAKTLITLGESEVESGQVTVKNNQTREEVQVSLE 411


>gi|288800883|ref|ZP_06406340.1| histidine--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039]
 gi|288332344|gb|EFC70825.1| histidine--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039]
          Length = 453

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 37/90 (41%)

Query: 553 IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
            Q +        V+Y   IA  L+++ +  E    N  +  ++   + K+IP ++I G+ 
Sbjct: 364 TQILFINFGEEEVDYCLPIATQLRTNGVFTEVFPDNTKMKKQMNYANAKQIPFVVIAGEN 423

Query: 613 EASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           E  E  + ++   +     ++  + I    
Sbjct: 424 EIKEGKLTLKNMLTGEQSLLTKEELIAKFQ 453



 Score = 43.2 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 36/231 (15%), Positives = 72/231 (31%), Gaps = 44/231 (19%)

Query: 270 RKGWKIFQTLISYMRRKIKD---------DYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            KG + F  L    R  I +          +++I TP +              Y      
Sbjct: 8   PKGTRDFSPLEMIKRNYIFNTIKDVYKLYGFQQIETPAMESLQT-----LMGKYGDEGDK 62

Query: 321 V------------KCADDTIKDLRTFALKPMNCP--------GHVAVFNHGLKSYRELPV 360
           +            K +DD +       L P  C            A +    +   ++P 
Sbjct: 63  LLFKILNSGDYLKKVSDDELLQRNPLKLAPQLCEKGLRYDLTVPFARYVVMHREELQMPF 122

Query: 361 RLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF 420
           +  +   V+R +         R R F Q DA +  +        +++  +I +++  FG 
Sbjct: 123 KRYQIQPVWRADRPQK----GRYREFYQCDADIVGSD--SLLNEVELVQIIDTVFTKFGI 176

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENI--MKGVLDTIKNSSQDRINTGVLL 469
              +   + +     G   +  +AE I  +   +D +     D +N  +  
Sbjct: 177 RVQIKINNRKILT--GIAEVIGEAEKIIDITVAIDKLDKIGIDNVNKELKE 225


>gi|113477024|ref|YP_723085.1| seryl-tRNA synthetase [Trichodesmium erythraeum IMS101]
 gi|122964624|sp|Q10YR2|SYS_TRIEI RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|110168072|gb|ABG52612.1| seryl-tRNA synthetase [Trichodesmium erythraeum IMS101]
          Length = 425

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/244 (13%), Positives = 81/244 (33%), Gaps = 22/244 (9%)

Query: 222 GTAWNTQQELTQY--LYFLEESEKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKI 275
           G +     E+ ++   Y  +  +   H ++  ++ +           S  +     G  +
Sbjct: 118 GKSEAENIEVKRWGDEYIPQNPKIIPHYEIGEKLGIMDFERGVKIAQSRFVALMGAGAAL 177

Query: 276 FQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
            + +I +M +R I+  Y E+  P +++      +G    +    F     D         
Sbjct: 178 ERAIIQFMLKRHIQVGYVEVMAPLLVNSQSLTATGQLPKFAEESFKCAADD--------L 229

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDA 391
            L P +    + ++   + S  +LP+    F   +R E         GL+R+  F + + 
Sbjct: 230 WLIPTSEVSTMNLYRDEILSAEQLPIYHCAFTPCFRREAGAYGKDTRGLIRLHQFNKVEM 289

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENI 447
                 E    E  K+     +I +       +++L +              +W  +   
Sbjct: 290 VKIVHPETSEEEHQKLVADAEAILQALKLPYRILELCSGDLGFSAAKCYDLEVWLPSSGT 349

Query: 448 MKGV 451
            + +
Sbjct: 350 YREI 353


>gi|329960090|ref|ZP_08298554.1| histidine--tRNA ligase [Bacteroides fluxus YIT 12057]
 gi|328533042|gb|EGF59815.1| histidine--tRNA ligase [Bacteroides fluxus YIT 12057]
          Length = 453

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 12/90 (13%), Positives = 35/90 (38%)

Query: 553 IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
            Q +          ++ ++   +++  +  E       +  ++   + K IP + + G+ 
Sbjct: 364 TQLLFINFGEKEAAFSLDVLAKVRAAGIRAEIFPDASKMKKQMGYANSKGIPFVALVGEN 423

Query: 613 EASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           E +E  + ++   +   + VS  + I  L 
Sbjct: 424 EMNEGKVTLKNMETGEQKLVSPQELISELN 453


>gi|289167022|ref|YP_003445289.1| histidyl-tRNA synthetase [Streptococcus mitis B6]
 gi|288906587|emb|CBJ21420.1| histidyl-tRNA synthetase [Streptococcus mitis B6]
          Length = 429

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 60/404 (14%), Positives = 126/404 (31%), Gaps = 56/404 (13%)

Query: 276 FQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           +Q +  + R   K  +Y E+ TP       ++          ++   +  D   K  R  
Sbjct: 20  WQYVEGFAREIFKRYNYAEVRTPIF---EHYEVISRSVGDTTDIVTKEMYDFYDKGDRHI 76

Query: 335 ALKPMNCPGHVAVFNHGLKS-----YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
            L+P    G   V    +++       + P +    G ++R E   +     R+R F Q 
Sbjct: 77  TLRP---EGTAPVVRSYVENKLFAPEVQKPSKFYYMGPMFRYERPQA----GRLRQFHQI 129

Query: 390 DAHVFCTKEQM-FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWD------ 442
               F +       E + +    +      G +  +  L     +     AL D      
Sbjct: 130 GVECFGSSNPATDVETIAMAAHFLKEIGIQGVKLHLNTLGNPESRAAYRQALIDYLTPLK 189

Query: 443 -----DAENIMKG----VLDTIKNSSQDR-------INTGVLLGEGAFYGPK-------F 479
                D++  ++     VLD+ +   +         ++      +  F   +        
Sbjct: 190 ETLSKDSQRRLEENPLRVLDSKEKEDKVAVENAPSILDFLDEESQAHFDAVRQMLENLGV 249

Query: 480 EYILKDAI--GRDWQCGTIQVDFNLPSRFNAFYVN---SHSEKCHPVMIHRAVFG---SI 531
           +YI+   +  G D+   TI          +              +      A FG    +
Sbjct: 250 DYIIDTNMVRGLDYYNHTIFEFITEIEGNDLTVCAGGRYDGLVSYFGGPETAGFGFGLGV 309

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           ER + I+    +G      + +   +  +   A   A E+   L+      E D+ N  +
Sbjct: 310 ERLLLIL--EKQGVALPIENALDVYIAVLGDGANVKALELVQALRQQGFKAERDYLNRKL 367

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
             + +   +     +I  G+ E     + ++   +    +VSL 
Sbjct: 368 KAQFKSADVFAAKTLITLGESEVESGQVTVKNNQTREEVQVSLE 411


>gi|168494122|ref|ZP_02718265.1| histidyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
 gi|183575890|gb|EDT96418.1| histidyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
          Length = 429

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 60/404 (14%), Positives = 127/404 (31%), Gaps = 56/404 (13%)

Query: 276 FQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           +Q +  + R   K  +Y E+ TP       ++          ++   +  D   K  R  
Sbjct: 20  WQYVEGFAREIFKRYNYAEVRTPIF---EHYEVISRSVGDTTDIVTKEMYDFYDKGDRHI 76

Query: 335 ALKPMNCPGHVAVFNHGLKS-----YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
            L+P    G   V    +++       + P +    G ++R E   +     R+R F Q 
Sbjct: 77  TLRP---EGTAPVVRSYVENKLFAPEVQKPSKFYYMGPMFRYERPQA----GRLRQFHQI 129

Query: 390 DAHVFCTKEQM-FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWD------ 442
               F +       E + +    +      G +  +  L     +     AL D      
Sbjct: 130 GVECFGSSNPATDVETIAMAAHFLKEIGIQGVKLHLNTLGNPESRAAYRQALIDYLTPLK 189

Query: 443 -----DAENIMKG----VLDTIKNSSQDR-------INTGVLLGEGAFYGPK-------F 479
                D++  ++     VLD+ +   ++        ++      +  F   +        
Sbjct: 190 ETLSKDSQRRLEENPLRVLDSKEKEDKEAVENAPSILDFLDEESQAHFDAVRQMLENLGV 249

Query: 480 EYILKDAI--GRDWQCGTIQVDFNLPSRFNAFYVN---SHSEKCHPVMIHRAVFG---SI 531
           +YI+   +  G D+   TI          +              +      A FG    +
Sbjct: 250 DYIIDTNMVRGLDYYNHTIFEFITEIEGNDLTVCAGGRYDGLVSYFGGPETAGFGFGLGV 309

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           ER + I+    +G      + +   +  +   A   A E+   L+      E D+ N  +
Sbjct: 310 ERLLLIL--EKQGVTLPIENALDVYIAVLGEGANIKALELVQALRQQGFKAERDYLNRKL 367

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
             + +   +     +I  G+ E     + ++   +    +VSL 
Sbjct: 368 KAQFKSADVFVAKTLITLGESEVESGQVTVKNNQTREEVQVSLE 411


>gi|194017166|ref|ZP_03055778.1| histidyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
 gi|194011034|gb|EDW20604.1| histidyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
          Length = 424

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 74/423 (17%), Positives = 138/423 (32%), Gaps = 79/423 (18%)

Query: 276 FQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           +Q +    R       Y+EI TP        +          ++   +      K  R+ 
Sbjct: 20  WQYVEQIARDTCAAFQYKEIRTPIF---EHTELFARGVGESTDIVQKEMYTFEDKKGRSI 76

Query: 335 ALKPMNCPGHVAVFNHGLKSY--REL------PVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
            L+P             ++SY   +L      P +L   G ++R E   +     R R F
Sbjct: 77  TLRPEG-------TASTVRSYVENKLFAQPAQPTKLYYIGPMFRYERPQT----GRYRQF 125

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG----------------FEKIMVKLSTR 430
            Q       +K+   +   ++ +L +S+Y+  G                       L   
Sbjct: 126 YQFGIEAIGSKDPAIDA--EVISLAMSVYEKAGLSNLKLVINSLGDKESRADYRKALVEH 183

Query: 431 PEKRVGS---DALWDDAENIMKGVLDTIKNSSQDRINTG-----VLLGEGAFYGPKFEYI 482
            E R+     D      +N ++ +LD  K+   + + T       L  E   Y  K +  
Sbjct: 184 FEPRIDEFCHDCQTRLHQNPLR-ILDCKKDRDHELMATAPSIQDYLNDESRTYFEKVKQY 242

Query: 483 LKD-----------AIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK--------CHPVMI 523
           L D             G D+   T     +    F A    +   +          P   
Sbjct: 243 LTDIGVEYVVDPNLVRGLDYYNHTAFEIMSNAEGFGAITTLAGGGRYDGLVEGIGGPESP 302

Query: 524 HRAVFGSIERFIGIMIENFKGNLPLWLSPIQ----AIVTTITSSAVEYAQEIANLLKSHH 579
                 SIERF+   I+    +LPL     Q      +  +   A +YA  + N L+   
Sbjct: 303 GIGFAMSIERFLSA-IDAEGIDLPL-----QDGIDLYIAALGDDAKDYAVSLLNRLRKEG 356

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
           +S E D+  + +  + +     K   I + G+ E ++  + ++   +    +V L + I 
Sbjct: 357 ISSEMDYTGKKLKGQFKAADRLKAKFIAVLGEDELAQHIVNVKDTTTGEQIEVKLDELIQ 416

Query: 640 ILT 642
           ++ 
Sbjct: 417 MMK 419


>gi|182685058|ref|YP_001836805.1| histidyl-tRNA synthetase [Streptococcus pneumoniae CGSP14]
 gi|229558735|sp|B2IN41|SYH_STRPS RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|182630392|gb|ACB91340.1| histidyl-tRNA synthetase [Streptococcus pneumoniae CGSP14]
          Length = 429

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 60/404 (14%), Positives = 127/404 (31%), Gaps = 56/404 (13%)

Query: 276 FQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           +Q +  + R   K  +Y E+ TP       ++          ++   +  D   K  R  
Sbjct: 20  WQYVEGFAREIFKRYNYAEVRTPIF---EHYEVISRSVGDTTDIVTKEMYDFYDKGDRHI 76

Query: 335 ALKPMNCPGHVAVFNHGLKS-----YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
            L+P    G   V    +++       + P +    G ++R E   +     R+R F Q 
Sbjct: 77  TLRP---EGTAPVVRSYVENKLFAPEVQKPSKFYYMGPMFRYERPQA----GRLRQFHQI 129

Query: 390 DAHVFCTKEQM-FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWD------ 442
               F +       E + +    +      G +  +  L     +     AL D      
Sbjct: 130 GVECFGSSNPATDVETIAMAAHFLKEIGIQGVKLHLNTLGNPESRAAYRQALIDYLTPLK 189

Query: 443 -----DAENIMKG----VLDTIKNSSQDR-------INTGVLLGEGAFYGPK-------F 479
                D++  ++     VLD+ +   ++        ++      +  F   +        
Sbjct: 190 ETLSKDSQRRLEENPLRVLDSKEKEDKEAVENAPSILDFLDEESQAHFDAVRQMLENLGV 249

Query: 480 EYILKDAI--GRDWQCGTIQVDFNLPSRFNAFYVN---SHSEKCHPVMIHRAVFG---SI 531
           +YI+   +  G D+   TI          +              +      A FG    +
Sbjct: 250 DYIIDTNMVRGLDYYNHTIFEFITEIEGNDLTVCAGGRYDGLVSYFGGPETAGFGFGLGV 309

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           ER + I+    +G      + +   +  +   A   A E+   L+      E D+ N  +
Sbjct: 310 ERLLLIL--EKQGVTLPIENALDVYIAVLGEGANIKALELVQALRQQGFKAERDYLNRKL 367

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
             + +   +     +I  G+ E     + ++   +    +VSL 
Sbjct: 368 KAQFKSADVFVAKTLITLGESEVESGQVTVKNNQTREEVQVSLE 411


>gi|167627901|ref|YP_001678401.1| alanyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|205830099|sp|B0TZY8|SYA_FRAP2 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|167597902|gb|ABZ87900.1| Alanine--tRNA ligase [Francisella philomiragia subsp. philomiragia
           ATCC 25017]
          Length = 865

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 33/142 (23%), Positives = 58/142 (40%), Gaps = 10/142 (7%)

Query: 65  EDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIED-GFYYDFDKEQPFSSDELAQIE 123
           +  R      HS  H++ + ++ I        G +++D    +DF  ++  S  E+ QIE
Sbjct: 544 DSVRLATAANHSATHLLHKVLKIILGSHAEQKGSLVDDNKLRFDFTHDKAISRVEIEQIE 603

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDL 182
             + + I  + P      S EKA+ L          E L      + V +   G++  +L
Sbjct: 604 TLVNQQIRANYPVATIETSQEKAKSLG--------AEALFGEKYGDIVRVISMGDFSIEL 655

Query: 183 CRGPHVRSTGQVKKFFKLMKVA 204
           C G HV  TG +  F  + +  
Sbjct: 656 CGGTHVAYTGDIGLFKIVSESG 677


>gi|27379859|ref|NP_771388.1| seryl-tRNA synthetase [Bradyrhizobium japonicum USDA 110]
 gi|46577251|sp|Q89L00|SYS_BRAJA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|27353012|dbj|BAC50013.1| seryl-tRNA synthetase [Bradyrhizobium japonicum USDA 110]
          Length = 443

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 33/247 (13%), Positives = 74/247 (29%), Gaps = 25/247 (10%)

Query: 211 DSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHR 270
           D +  +   ++G   N       +          D    A+      +           +
Sbjct: 118 DEHGNVQHHVFGNKRNYGFAPKLHDDLGNALGYMDFEAAAKLSGARFVV---------LK 168

Query: 271 KG-WKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA------V 321
           KG  ++ + +  +M      +  Y EIN P ++   +   +G    +  + F       +
Sbjct: 169 KGLARLERAIGQFMLDLHTTEHGYTEINPPLLVRNEVMFGTGQLPKFEDDQFWAIKGELL 228

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LH 378
              D          L P        +    +   ++LP+RL      +R E   +     
Sbjct: 229 ASPDHERLKTERLGLIPTAEVSLTNLARESILDEKQLPMRLTALTPCFRAEAGAAGRDTR 288

Query: 379 GLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR---- 434
           G++R   FT+ +     T E   +E  ++ +    + +       ++ L           
Sbjct: 289 GMIRQHQFTKVELVSITTPEASKDELERMLSCAEQVLQKLDLHYRVMTLCAGDMGFSSQK 348

Query: 435 VGSDALW 441
                +W
Sbjct: 349 TYDIEVW 355


>gi|2500957|sp|P70865|SYA_BARBA RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|1568622|gb|AAB09037.1| AlaS [Bartonella bacilliformis]
          Length = 886

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 33/154 (21%), Positives = 65/154 (42%), Gaps = 4/154 (2%)

Query: 55  REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQP 113
           +   +E+I     R      HS  H++ E+++       V  G  +  D   +DF   + 
Sbjct: 544 KHDCVELIVDSARRRKIRANHSATHLLHESLRQTLGSHVVQKGSFVSPDRLRFDFSHPKS 603

Query: 114 FSSDELAQIEKKMQEIIARDSPFLKQYLSHEKAREL--FESKKEAYKVEI-LESIPAKEN 170
            SS+EL +IE    +I+ ++S    + ++ + A          E Y  E+ + S+     
Sbjct: 604 ISSEELKKIEDLANDIVLQNSKVTTRLMAIDDAIAEGAMALFGEKYGDEVRVISMGNNLE 663

Query: 171 VTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVA 204
            T  ++    +LC G HV+ TG +     + + +
Sbjct: 664 QTGSKKWWSIELCGGTHVQRTGDIGLIHIISETS 697


>gi|121601991|ref|YP_989027.1| alanyl-tRNA synthetase [Bartonella bacilliformis KC583]
 gi|205829988|sp|A1USS4|SYA_BARBK RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|120614168|gb|ABM44769.1| alanyl-tRNA synthetase [Bartonella bacilliformis KC583]
          Length = 886

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 33/154 (21%), Positives = 65/154 (42%), Gaps = 4/154 (2%)

Query: 55  REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQP 113
           +   +E+I     R      HS  H++ E+++       V  G  +  D   +DF   + 
Sbjct: 544 KHDCVELIVDSARRRKIRANHSATHLLHESLRQTLGSHVVQKGSFVSPDRLRFDFSHPKS 603

Query: 114 FSSDELAQIEKKMQEIIARDSPFLKQYLSHEKAREL--FESKKEAYKVEI-LESIPAKEN 170
            SS+EL +IE    +I+ ++S    + ++ + A          E Y  E+ + S+     
Sbjct: 604 ISSEELKKIEDLANDIVLQNSKVTTRLMAIDDAIAEGAMALFGEKYGDEVRVISMGNNLE 663

Query: 171 VTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVA 204
            T  ++    +LC G HV+ TG +     + + +
Sbjct: 664 QTGSKKWWSIELCGGTHVQRTGDIGLIHIISETS 697


>gi|325285608|ref|YP_004261398.1| alanyl-tRNA synthetase [Cellulophaga lytica DSM 7489]
 gi|324321062|gb|ADY28527.1| alanyl-tRNA synthetase [Cellulophaga lytica DSM 7489]
          Length = 871

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 65/159 (40%), Gaps = 13/159 (8%)

Query: 44  NGKVCDLSDPVREGSIEI---ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII 100
           N ++   +  + + + +I   +     R      H+  H++ +A++ +        G  +
Sbjct: 529 NNEIIHFAKNLPKNTTDIFKAVVDVKQRQRTASNHTATHLLHQALREVLGTHVEQKGSAV 588

Query: 101 EDGF-YYDFDKEQPFSSDELAQIEKKMQEIIARDSPFL-KQYLSHEKARELFESKKEAYK 158
              +  +DF      ++++L ++E  +   I  + P   K+ +  ++A +         K
Sbjct: 589 HSKYLRFDFSHFSKVTTEQLKEVEDFVNARIEGNLPLEEKRNIPMQEALDAGAMALFGEK 648

Query: 159 VEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
                     + V L R G+  +LC G HV++TG +  F
Sbjct: 649 Y--------GDTVRLIRFGQSVELCGGTHVQNTGDIWHF 679


>gi|289422591|ref|ZP_06424434.1| serine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
 gi|289157163|gb|EFD05785.1| serine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
          Length = 443

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 72/179 (40%), Gaps = 16/179 (8%)

Query: 271 KGWKIFQTLIS-YMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
            G ++ + L+S YM +  ++ Y EI  P + +++ +  +G    +  +MF ++  D    
Sbjct: 190 LGARLERALLSFYMDQHSENGYTEIIPPFMANRNSFIGTGQLPKFEEDMFKIEGLD---- 245

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGF 386
               + L P        ++N+ +  +  LP++   +   +R+E   +     GL+R   F
Sbjct: 246 ----YFLVPTAEVPVTNLYNNEIVDFDSLPIKHCAYTPCFRSEAGSAGRDTRGLVRQHQF 301

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALW 441
            + +   F   E  + E   + N    + +  G    +VK+ T              +W
Sbjct: 302 NKVELVKFVKPEDSYEELESLTNDAEKMLQLLGLPYRVVKICTGDLGFTAAKKYDLEVW 360


>gi|226952658|ref|ZP_03823122.1| alanyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
 gi|226836595|gb|EEH68978.1| alanyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
          Length = 884

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 38/169 (22%), Positives = 71/169 (42%), Gaps = 14/169 (8%)

Query: 36  KKAVAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVA 95
           KK+    ++  +  +       S+E     D R+     HS  H++  A++ I  +    
Sbjct: 530 KKSGGAFVHQGIVTVGSLKATQSVEATVKADIRAATARNHSATHLLHAALRQILGDHVQQ 589

Query: 96  IGP-IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE------ 148
            G  +  D   +DF  +QP + D+L QIE+ +   +  ++P   + L  E A+       
Sbjct: 590 KGSLVASDILRFDFANDQPVTFDQLQQIERLVNAEVLANTPVTTELLDIETAKAKGAMML 649

Query: 149 LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
             E   +  +V  + S+   +N +        +LC G HV+ TG +  F
Sbjct: 650 FGEKYGDEVRVLSMGSVIEDKNFS-------IELCGGIHVKRTGDIGLF 691


>gi|78223528|ref|YP_385275.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA [Geobacter
           metallireducens GS-15]
 gi|78194783|gb|ABB32550.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA [Geobacter
           metallireducens GS-15]
          Length = 716

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 1/63 (1%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI-E 60
           P ++ +  P+G +K+FP  +T  D A +I   L  + V   +NGK+  L   ++ G I E
Sbjct: 384 PEEVYVFTPNGDVKSFPKGSTPIDFAYTIHTDLGHRCVGAKVNGKLVPLKYELKNGDIVE 443

Query: 61  IIT 63
           +IT
Sbjct: 444 VIT 446


>gi|326791257|ref|YP_004309078.1| alanyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
 gi|326542021|gb|ADZ83880.1| alanyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
          Length = 881

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/166 (18%), Positives = 69/166 (41%), Gaps = 15/166 (9%)

Query: 37  KAVAVAI--NGKVCDLSDPVREGSIEIITPEDPRSLAVIR-HSCAHIMAEAVQSIWPEVQ 93
           K +      + +V + S  + +G     T E+   +   R HS  H++ +A++ +     
Sbjct: 528 KVIGGKFAHHAQVVEGS--IEKGQSATFTVENVSRMDTSRNHSATHLLQKALREVVGGHI 585

Query: 94  VAIGPII-EDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFES 152
              G  + +D   +DF   +  + ++L ++E  + E I        + +  ++AR+L   
Sbjct: 586 EQAGSNVNKDRLRFDFTHFEALTHEQLEKVEALVNEKILEGLTITIKEMPIDEARKLGAM 645

Query: 153 KKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
                K          + V +   G++  +LC G H+++T  +  F
Sbjct: 646 ALFGEKY--------GQTVRVVNMGDYSVELCGGTHLQNTAAIGTF 683


>gi|224500670|ref|ZP_03669019.1| alanyl-tRNA synthetase [Listeria monocytogenes Finland 1988]
          Length = 879

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 61/143 (42%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFS 115
            ++++   +  R   +  H+  H++  A++    E     G ++  D   +DF      +
Sbjct: 548 DTVKLAVDKVKRRETIKNHTATHLLHRALKDTLGEHVNQAGSLVSPDRLRFDFSHFGQIT 607

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            +EL ++E+ + E I      + + +   +A+EL        K          + V + +
Sbjct: 608 EEELTKMEEIVNEKIWEQINVVIEEMPIAEAKELGAMALFGEKY--------GDIVRVVQ 659

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G++  +LC G HVR+T  +  F
Sbjct: 660 VGKYSIELCGGVHVRNTADIGLF 682


>gi|91977257|ref|YP_569916.1| seryl-tRNA synthetase [Rhodopseudomonas palustris BisB5]
 gi|123735378|sp|Q136H4|SYS_RHOPS RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|91683713|gb|ABE40015.1| seryl-tRNA synthetase [Rhodopseudomonas palustris BisB5]
          Length = 434

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/219 (14%), Positives = 70/219 (31%), Gaps = 16/219 (7%)

Query: 236 YFLEESEKRDHRKLAREMDLFHI---AEDGSGVIFWHRKG-WKIFQTLISYMRRKI--KD 289
                   + H  L   + +      A+         + G  ++ + +  +       + 
Sbjct: 131 KRSYTFTPKAHDDLGEALGMMDFEAAAKLSGARFVVLKNGLARLERAIGQFFLDVHTGEH 190

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
            Y E+N P ++       +     +R + FA   A         + L P        +  
Sbjct: 191 GYTEVNPPLLVKDDAMFGTAQLPKFRDDQFA---AGAIGSGGEGYWLIPTAEVSLTNLVR 247

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
             +   +ELP+RL      +R E   +     G++R   FT+ +     T E+  +E  +
Sbjct: 248 ESILDEKELPMRLTALTPCFRAEAGAAGRDTRGMIRQHQFTKVELVSITTPEKSKDEHER 307

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALW 441
           + +    + +  G    ++ L T              +W
Sbjct: 308 MLSCAEEVLRRLGLHYRVMTLCTGDMGFASQKTYDIEVW 346


>gi|332362623|gb|EGJ40421.1| alanine--tRNA ligase [Streptococcus sanguinis SK49]
          Length = 872

 Score = 62.9 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/160 (21%), Positives = 67/160 (41%), Gaps = 14/160 (8%)

Query: 44  NGK---VCDLSDPVREGSIEIITPEDPRSLAVI-RHSCAHIMAEAVQSIWPEVQVAIGPI 99
           NG+     ++ DP+  G    +  +  R   V+  H+  H++  A+ ++        G +
Sbjct: 532 NGQPLHTVEVLDPLALGQSYKLEIDHSRRHRVMKNHTATHLLHAALHNVLGNHATQAGSL 591

Query: 100 IEDGF-YYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYK 158
            E  F  +DF   Q  +++EL  IE+++ E I             +KA+E+        K
Sbjct: 592 NEVEFLRFDFTHFQAVTAEELRAIEQEVNEKIWEALAIETVETDIDKAKEMGAMALFGEK 651

Query: 159 VEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
                     + V +   G++  +LC G HV +T ++  F
Sbjct: 652 Y--------GKEVRVVTIGDYSVELCGGTHVGNTSEIGIF 683


>gi|282879624|ref|ZP_06288355.1| serine--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
 gi|281306572|gb|EFA98601.1| serine--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
          Length = 429

 Score = 62.9 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/213 (14%), Positives = 68/213 (31%), Gaps = 20/213 (9%)

Query: 246 HRKLAREMDLFHIA----EDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVL 300
           H  L ++ +L          G+G   +  K  +  + L ++   + +   Y E+  P V+
Sbjct: 144 HWDLCKKYNLIDFDLGVKITGAGFPIYIGKMARFQRALEAFFLEEARKAGYLEVQPPFVV 203

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +            Y       K        L    L P        +F   +   ++LP+
Sbjct: 204 N--------QASGYGTGQLPDKEGQMYHVQLDDLYLIPTAEVPVTNIFRDVILDEKDLPI 255

Query: 361 RLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           +   + + +R E       + GL R+  F + +       E  +    ++ N +  + + 
Sbjct: 256 KRCAYSACFRREAGSYGKDVRGLNRLHQFDKVELVRIDRPEHSYQSLQEMLNHVEGLCQK 315

Query: 418 FGFEKIMVKLSTRPEKRV----GSDALWDDAEN 446
                 ++KL                +W  A+ 
Sbjct: 316 LELPYHILKLCGGDMSFTSSICYDFEVWSAAQK 348


>gi|167619822|ref|ZP_02388453.1| histidyl-tRNA synthetase [Burkholderia thailandensis Bt4]
          Length = 446

 Score = 62.9 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 62/405 (15%), Positives = 121/405 (29%), Gaps = 73/405 (18%)

Query: 289 DDYEEINTPQV--LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA 346
             Y+ I TP V              D     M++   A +         L+P N    V 
Sbjct: 42  YGYQNIRTPIVEHTPLFTRGIGEVTDIVEKEMYSFVDALN----GENLTLRPEN-TAAVV 96

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD--DAHVFCTKEQMFNEC 404
                     + P RL   G ++R+E         R R F Q   +A  F   +      
Sbjct: 97  RAAIEHNMLYDGPKRLWYIGPMFRHERPQR----GRYRQFHQVGVEALGFAGPDADA--- 149

Query: 405 LKIHNLIISIYKDFG--------------FEKIMVKLSTRPEKRVGSDALWDDAENIM-- 448
            +I  +   ++ D G               E+   ++         +D L DDA+  +  
Sbjct: 150 -EIIMMCQRLWDDLGLTGIKLEINSLGLAEERAAHRVELIKYLEQHADKLDDDAQRRLYT 208

Query: 449 ---------KGVLDTIKNSSQDRINTGVLLGEGAFYGP-------KFEYILKDAIGRDWQ 492
                       L  I  ++   I+    +    F G           + +   + R   
Sbjct: 209 NPLRVLDTKNPALQEIVRNAPKLIDFLGDVSRAHFEGLQRLLKANNVPFTINPRLVRGLD 268

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIH-------RAVFGS-IERFIGIMIENFKG 544
              + V   +  +  A    +   +  P++            +   IER + ++ E    
Sbjct: 269 YYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQLGGKPTAACGWAMGIERILELLKEEH-- 326

Query: 545 NLPLWLSPIQ----AIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY----KIR 596
                L P Q      V     +A E A  +A  L+   L +      +        +++
Sbjct: 327 -----LVPEQEGVDVYVVHQGDAAREQAFIVAERLRDTGLDVILHCSADGAGASFKSQMK 381

Query: 597 EHSIKKIPIIIICGDKEASERSIGIR-RFGSTTTQKVSLLDAIPI 640
                     +I G+ E +  +  ++   G+    + S+  ++P+
Sbjct: 382 RADASGAAFAVIFGEDEVTNGTASVKPLRGTGDDGEKSVQQSVPV 426


>gi|257465412|ref|ZP_05629783.1| alanyl-tRNA synthetase [Actinobacillus minor 202]
 gi|257451072|gb|EEV25115.1| alanyl-tRNA synthetase [Actinobacillus minor 202]
          Length = 874

 Score = 62.9 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/127 (19%), Positives = 54/127 (42%), Gaps = 10/127 (7%)

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIA 131
           + HS  H++  A++ +     +  G  + E+G  +DF + +  + ++L  IE+ +   I 
Sbjct: 561 LNHSATHLLHSALREVLGTHVMQKGSLVNENGLRFDFSQPEAITKEQLEAIERIVNAKIR 620

Query: 132 RDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRS 190
            +   + + +  E+A+          K          + V +     +  +LC G HV+ 
Sbjct: 621 ENIEVVIEEMGIEEAKAKGAMALFGEKY--------GDVVRVVDMSVFSIELCGGTHVKR 672

Query: 191 TGQVKKF 197
           TG +  F
Sbjct: 673 TGDIGLF 679


>gi|157414790|ref|YP_001482046.1| alanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81116]
 gi|205830015|sp|A8FKT2|SYA_CAMJ8 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|157385754|gb|ABV52069.1| alanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81116]
 gi|307747428|gb|ADN90698.1| Alanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni M1]
 gi|315931702|gb|EFV10657.1| alanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 327]
          Length = 842

 Score = 62.9 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/142 (23%), Positives = 63/142 (44%), Gaps = 9/142 (6%)

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQI 122
             + R      HS  H++  A++ I        G ++E +   +DF   +  S +EL  I
Sbjct: 538 DTEKREQIARHHSATHLLHHALREILGSHVSQAGSLVESNKLRFDFTHHKALSKEELENI 597

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK++ E+I   S  + + +  E+A++         K +         NV +   GE  +L
Sbjct: 598 EKRVNEMIINSSEAILENMPLEEAKKSGAIALFNEKYQ--------GNVRVLTLGESKEL 649

Query: 183 CRGPHVRSTGQVKKFFKLMKVA 204
           C G HV++T Q+  F+ + +  
Sbjct: 650 CGGTHVKNTAQIGSFYIVKESG 671


>gi|255658301|ref|ZP_05403710.1| histidine--tRNA ligase [Mitsuokella multacida DSM 20544]
 gi|260849618|gb|EEX69625.1| histidine--tRNA ligase [Mitsuokella multacida DSM 20544]
          Length = 421

 Score = 62.9 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 67/411 (16%), Positives = 131/411 (31%), Gaps = 54/411 (13%)

Query: 276 FQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           +  +   +R       +EEI TP        +          ++   +      +  R+ 
Sbjct: 20  WNYIEGKIREICGRYGFEEIRTPLF---EHTELFHRGIGEGTDVVDKEMYTFEDRGGRSI 76

Query: 335 ALKPMNCPGHVAVF-NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
            L+P N    V  +  + L     L V+L   GS++R +   +     R+R F Q    V
Sbjct: 77  TLRPENTASVVRAYLQNKLYGDSSL-VKLFYIGSMFRYDRPQA----GRMREFHQFG--V 129

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIM-------VKLSTRPEKRVGSDALWDDAEN 446
               E+      +I  L +   +  G + +                ++V  D   D  ++
Sbjct: 130 ESLGEENPMADAEIIMLAVDFLQSLGLKDLKLSLNSVGCPKCRPVYRKVLQDYFRDKLDD 189

Query: 447 IMKGVLDTIKNSSQDRINTGVLLGEGAF--YGPKFEYILKDAIGRDWQCGTIQVDFNLPS 504
           + +   D  + S    ++  V   +  +    PK    L D   R+          N   
Sbjct: 190 LCEDCQDRFERSPLRILDCKVD-ADKPYMADAPKITDCLCDEC-REHFEKVQSYLTNAGI 247

Query: 505 RFNA---------FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW------ 549
            F           +Y  +  E  +  +  ++      R+ G++ E      P        
Sbjct: 248 EFELDPRLVRGLDYYTKTAFEIKYAPLGAQSAVAGGGRYDGLIEEIGGKPTPAVGFATGL 307

Query: 550 -----------LSPIQ-----AIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY 593
                      L P Q     A V  +  +A   A  +   L+   L    D+   ++  
Sbjct: 308 ERVLLALEKQGLIPEQPKKTDAFVVALGEAAKAPAFTLLTKLRRAGLKASMDYAGRSMKA 367

Query: 594 KIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           ++++ +       +I G+ E  E  + ++    +  QKVS    I  L  E
Sbjct: 368 QMKQANKANARFALIIGEDEVKESCVMLKDMEKSVQQKVSFDAIIEKLCAE 418


>gi|184155308|ref|YP_001843648.1| histidyl-tRNA synthetase [Lactobacillus fermentum IFO 3956]
 gi|227514593|ref|ZP_03944642.1| histidine--tRNA ligase [Lactobacillus fermentum ATCC 14931]
 gi|260662178|ref|ZP_05863074.1| histidyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN]
 gi|229558691|sp|B2GBY6|SYH_LACF3 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|183226652|dbj|BAG27168.1| histidyl-tRNA synthase [Lactobacillus fermentum IFO 3956]
 gi|227087004|gb|EEI22316.1| histidine--tRNA ligase [Lactobacillus fermentum ATCC 14931]
 gi|260553561|gb|EEX26453.1| histidyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN]
 gi|299783163|gb|ADJ41161.1| Histidyl-tRNA synthetase (Histidine--tRNA ligase) (HisRS)
           [Lactobacillus fermentum CECT 5716]
          Length = 431

 Score = 62.9 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 61/434 (14%), Positives = 130/434 (29%), Gaps = 67/434 (15%)

Query: 265 VIFWHRKGWK--------IFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYR 315
           + +   KG           +Q +    R+  K   Y+EI TP       +          
Sbjct: 1   MRYQRPKGTADILPGDSQTWQYVEGQARQIFKTYGYQEIRTPLF---ESYDIFSRSAGDT 57

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF--NHGLKSYRELPVRLAEFGSVYRNEP 373
           +++   +  D   K  R  AL+P    G V  F  N         P ++   G ++R E 
Sbjct: 58  SDVVTKEMYDFKDKGDRHIALRPEGTAGVVRAFVENKLYGPEFNKPYKVYYIGPMFRYER 117

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM--------- 424
             S     R R F Q     F       +   ++  + +  +K  G   +          
Sbjct: 118 PQS----GRQREFHQIGVEAFGADNPAVDV--EVITMALRFFKKLGLSDLRVAVNSLGDQ 171

Query: 425 -----VKLSTRPEKRVGSDALWDDAENIMKG----VLDT-------IKNSSQDRINTGVL 468
                 + +     +   D L +D++  ++     VLD+          ++   ++    
Sbjct: 172 ESRANYRQALIDYLKPHYDELSEDSKERLEKNPLRVLDSKDERDQQFVENAPSILDYLTP 231

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTI---QVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
                F   K    + D++G D+         +D+   + F            +  +   
Sbjct: 232 AAAERFDQVK---EMLDSLGIDYVVDATMVRGLDYYNHTIFEVMVKAKSLGHGYTTICGG 288

Query: 526 AVFGSIERFIG----------------IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQ 569
             +  +   +G                I++   +G        +   V  I  +    + 
Sbjct: 289 GRYSGLVEELGGPDEPGVGFGIGLERLILLLGDEGVELPTEDGLDVYVVGIGEATNLESF 348

Query: 570 EIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
            +    +   L  E D+ N     + +  + +   + +  G +E  E ++  +   +   
Sbjct: 349 RLVTAARDAGLVAERDYLNRKPKAQFKTAAKEGAKVTLTVGQREIEEGTVHFKVMATGKE 408

Query: 630 QKVSLLDAIPILTK 643
             V L D +    K
Sbjct: 409 VSVPLADCLADFGK 422


>gi|163856313|ref|YP_001630611.1| alanyl-tRNA synthetase [Bordetella petrii DSM 12804]
 gi|205829993|sp|A9IK31|SYA_BORPD RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|163260041|emb|CAP42342.1| alaS2 [Bordetella petrii]
          Length = 873

 Score = 62.9 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/131 (22%), Positives = 58/131 (44%), Gaps = 9/131 (6%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKM 126
           R+  V  HS  H+M +A++ +        G +++ D   +DF  + P S++++AQ+E  +
Sbjct: 555 RARTVRNHSATHLMHKALRQVLGAHVQQRGSLVDPDKTRFDFAHDAPLSAEQIAQVEAIV 614

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGP 186
              +  + P   + ++++ A +         K          + V +   G   +LC G 
Sbjct: 615 NAEVLANQPTQARVMAYDDAVKGGAMALFGEKY--------GDTVRVLDIGFSRELCGGT 666

Query: 187 HVRSTGQVKKF 197
           HV  TG +  F
Sbjct: 667 HVSRTGDIGLF 677


>gi|124008140|ref|ZP_01692838.1| seryl-tRNA synthetase [Microscilla marina ATCC 23134]
 gi|123986388|gb|EAY26201.1| seryl-tRNA synthetase [Microscilla marina ATCC 23134]
          Length = 424

 Score = 62.9 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/220 (12%), Positives = 71/220 (32%), Gaps = 16/220 (7%)

Query: 223 TAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIA----EDGSGVIFWHRKGWKIFQT 278
           T  + + E           +   H  L ++ D+          G+G   +  KG ++ + 
Sbjct: 121 TDADNKVESEHGSVPTLHDKAVPHWDLIKQYDIIDFEVGTKITGAGFPVYKGKGARLQRA 180

Query: 279 LISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALK 337
           LI++ +   +   Y E+  P +++Q           +       K             L 
Sbjct: 181 LINFFLDEAVNAGYSEVIPPYLVNQDS--------GFGTGQLPDKDGQMYHAQEDGLYLI 232

Query: 338 PMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVF 394
           P        ++   +    +LP++   +   +R E       + GL R+  F + +    
Sbjct: 233 PTAEVPITNMYRDVIVEETDLPIKHVGYTPCFRREAGAWGAQVRGLNRLHQFDKVEIVQI 292

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              E+ +    ++   +  + +       +++L +     
Sbjct: 293 QHPEKSYETLNEMCTHVQGLLQKLDLPYRVLRLCSGDLGF 332


>gi|254828262|ref|ZP_05232949.1| alanyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
 gi|258600650|gb|EEW13975.1| alanyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
          Length = 879

 Score = 62.9 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 61/143 (42%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFS 115
            ++++   +  R   +  H+  H++  A++    E     G ++  D   +DF      +
Sbjct: 548 DTVKLAVDKVKRRETIKNHTATHLLHRALKDTLGEHVNQAGSLVSPDRLRFDFSHFGQIT 607

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            +EL ++E+ + E I      + + +   +A+EL        K          + V + +
Sbjct: 608 EEELTKMEEIVNEKIWEQINVVIEEMPIAEAKELGAMALFGEKY--------GDIVRVVQ 659

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G++  +LC G HVR+T  +  F
Sbjct: 660 VGKYSIELCGGVHVRNTADIGLF 682


>gi|304405768|ref|ZP_07387426.1| seryl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
 gi|304345011|gb|EFM10847.1| seryl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
          Length = 426

 Score = 62.9 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/223 (16%), Positives = 80/223 (35%), Gaps = 21/223 (9%)

Query: 242 EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEIN 295
           E + H  +A+E+ +          GS  +F+   G ++ + LI++M     D   YEEI 
Sbjct: 136 EPKPHWDIAQELGILDFERAAKVTGSRFVFYRGLGARLERALINFMMDLHSDKHGYEEIL 195

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
            P ++++     +G    +  ++F +  +D        + L P        +    + S 
Sbjct: 196 PPYIVNRDSLYGTGQLPKFEEDLFKIADSD--------YYLIPTAEVPVTNIAREEILSS 247

Query: 356 RELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
            ELP     + + +R+E   +     GL+R   F + +       E  ++E   +     
Sbjct: 248 EELPKYFVAYSACFRSEAGAAGRDTRGLIRQHQFNKVELLKLVKPETSYDELEAMTANAE 307

Query: 413 SIYKDFGFEKI----MVKLSTRPEKRVGSDALWDDAENIMKGV 451
            + +  G                  +     +W  + +  + +
Sbjct: 308 KVLELLGLPYRVLALCTGDMGFSAAKTYDLEVWLPSADTYREI 350


>gi|303326376|ref|ZP_07356819.1| alanine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
 gi|302864292|gb|EFL87223.1| alanine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
          Length = 892

 Score = 62.9 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/144 (21%), Positives = 52/144 (36%), Gaps = 15/144 (10%)

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSDEL 119
           +    D R      H+C H++  A++          G +++     +DF      + +EL
Sbjct: 565 LSVDADSRQSTARNHTCTHLLHAALRRTLGTHVKQAGSLVDSRRLRFDFSHIAALTPEEL 624

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG-- 177
           A +E+ +   I  D P   + +  E+A           K          E V +   G  
Sbjct: 625 AAVERDVNRAIMADLPVAAREMPREEALAGGAMALFGEKY--------GETVRVLTVGCE 676

Query: 178 ----EWFDLCRGPHVRSTGQVKKF 197
               E  +LC G H+  TGQ   F
Sbjct: 677 GREPESMELCGGTHLSRTGQAGSF 700


>gi|303238651|ref|ZP_07325184.1| histidyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
 gi|302593770|gb|EFL63485.1| histidyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
          Length = 417

 Score = 62.9 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 70/197 (35%), Gaps = 16/197 (8%)

Query: 446 NIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSR 505
             +K  L+ +    +  I+  ++ G   +    FE++ K+   +   CG  + D  +   
Sbjct: 236 EGLKEGLENLGI--KYNIDKNIVRGLDYYTKTVFEFVSKNIGAQGTVCGGGRYDGLIEE- 292

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAV 565
                   +        I       IER +  ++   +G        I   +  I   A 
Sbjct: 293 -----CGGNQTPGIGFAI------GIERLL--LVMESQGIEIPKAEAIDVYIACIGEQAQ 339

Query: 566 EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
           +YAQ++   ++    S ETD    ++  +++          ++ GD E       ++   
Sbjct: 340 KYAQKLVYKIRQEGFSAETDLMGRSVKAQMKYADKLGAVYSLVLGDTEVESNKAVLKNML 399

Query: 626 STTTQKVSLLDAIPILT 642
           +  T+ +SL   I  L 
Sbjct: 400 TGETKDISLDTLIERLK 416


>gi|169334468|ref|ZP_02861661.1| hypothetical protein ANASTE_00871 [Anaerofustis stercorihominis DSM
           17244]
 gi|169259185|gb|EDS73151.1| hypothetical protein ANASTE_00871 [Anaerofustis stercorihominis DSM
           17244]
          Length = 874

 Score = 62.9 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/133 (22%), Positives = 59/133 (44%), Gaps = 10/133 (7%)

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIAR 132
            HS  H++ +A++ +  E     G  +  +   +DF   +  +++EL +IEK++   I  
Sbjct: 561 NHSATHLLHKALKEVLGEHVNQAGSYVDSERLRFDFSHFEKVTNEELDEIEKRVNAEILN 620

Query: 133 DSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRST 191
                    S ++AR+L  +     K           NV + + G++  +LC G HV +T
Sbjct: 621 KDEVNYFETSIDEARKLGATALFGEKY--------GSNVRVVKMGDYSIELCGGCHVNNT 672

Query: 192 GQVKKFFKLMKVA 204
             +  F  L + +
Sbjct: 673 NDISMFKILSESS 685


>gi|16803544|ref|NP_465029.1| alanyl-tRNA synthetase [Listeria monocytogenes EGD-e]
 gi|47097201|ref|ZP_00234765.1| alanyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
 gi|224501556|ref|ZP_03669863.1| alanyl-tRNA synthetase [Listeria monocytogenes FSL R2-561]
 gi|254898330|ref|ZP_05258254.1| alanyl-tRNA synthetase [Listeria monocytogenes J0161]
 gi|254912178|ref|ZP_05262190.1| alanyl-tRNA synthetase [Listeria monocytogenes J2818]
 gi|254936506|ref|ZP_05268203.1| alanyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|20532249|sp|Q8Y722|SYA_LISMO RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|16410933|emb|CAC99582.1| alanyl-tRNA synthetase [Listeria monocytogenes EGD-e]
 gi|47014415|gb|EAL05384.1| alanyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
 gi|258609100|gb|EEW21708.1| alanyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|293590151|gb|EFF98485.1| alanyl-tRNA synthetase [Listeria monocytogenes J2818]
          Length = 879

 Score = 62.9 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 61/143 (42%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFS 115
            ++++   +  R   +  H+  H++  A++    E     G ++  D   +DF      +
Sbjct: 548 DTVKLAVDKVKRRETIKNHTATHLLHRALKDTLGEHVNQAGSLVSPDRLRFDFSHFGQIT 607

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            +EL ++E+ + E I      + + +   +A+EL        K          + V + +
Sbjct: 608 EEELTKMEEIVNEKIWEQINVVIEEMPIAEAKELGAMALFGEKY--------GDIVRVVQ 659

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G++  +LC G HVR+T  +  F
Sbjct: 660 VGKYSIELCGGVHVRNTADIGLF 682


>gi|237713808|ref|ZP_04544289.1| histidyl-tRNA synthetase [Bacteroides sp. D1]
 gi|262409285|ref|ZP_06085828.1| histidyl-tRNA synthetase [Bacteroides sp. 2_1_22]
 gi|294644704|ref|ZP_06722453.1| histidine--tRNA ligase [Bacteroides ovatus SD CC 2a]
 gi|294805935|ref|ZP_06764802.1| histidine--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
 gi|229446255|gb|EEO52046.1| histidyl-tRNA synthetase [Bacteroides sp. D1]
 gi|262352737|gb|EEZ01834.1| histidyl-tRNA synthetase [Bacteroides sp. 2_1_22]
 gi|292639967|gb|EFF58236.1| histidine--tRNA ligase [Bacteroides ovatus SD CC 2a]
 gi|294446817|gb|EFG15417.1| histidine--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
          Length = 454

 Score = 62.9 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/208 (16%), Positives = 73/208 (35%), Gaps = 27/208 (12%)

Query: 442 DDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFN 501
           +++E I+   L+T+   ++  ++  +  G   + G  FE    D        G      N
Sbjct: 268 EESEFIL-NTLETMGLKNEIELDLTLARGLNYYTGAIFEVKALDVQIGSITGGGR--YDN 324

Query: 502 LPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI----- 556
           L   F    V+              +    +R   ++ +       L L P +A+     
Sbjct: 325 LTGVFGMAGVSGVG-----------ISFGADRIFDVLNQ-------LELYPKEAVNGTEL 366

Query: 557 -VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEAS 615
                      Y+  I   +++ ++  E       +  ++   + K IP + I G+ E +
Sbjct: 367 LFINFGEKEAAYSMGILAKVRAANIRAEIFPDAAKMKKQMSYANAKNIPFVAIVGENEMN 426

Query: 616 ERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           E  + ++   +     VS  + I I+ K
Sbjct: 427 EGKVMLKNMETGEQNLVSADELIAIVKK 454


>gi|332365982|gb|EGJ43738.1| alanine--tRNA ligase [Streptococcus sanguinis SK1059]
          Length = 872

 Score = 62.9 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/142 (21%), Positives = 58/142 (40%), Gaps = 12/142 (8%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGF-YYDFDKEQPFSS 116
            +EI      R   +  H+  H++  A+ ++        G + E  F  +DF   Q  ++
Sbjct: 552 KLEI--DHSRRHRVMKNHTATHLLHAALHNVLGNHATQAGSLNEVEFLRFDFTHFQAVTA 609

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
           +EL  IE+++ E I             +KA+E+        K          + V +   
Sbjct: 610 EELRAIEQEVNEKIWEALAIETVETDIDKAKEMGAMALFGEKY--------GKEVRVVTI 661

Query: 177 GEW-FDLCRGPHVRSTGQVKKF 197
           G++  +LC G HV +T ++  F
Sbjct: 662 GDYSVELCGGTHVGNTSEIGIF 683


>gi|304382464|ref|ZP_07364962.1| histidine--tRNA ligase [Prevotella marshii DSM 16973]
 gi|304336417|gb|EFM02655.1| histidine--tRNA ligase [Prevotella marshii DSM 16973]
          Length = 452

 Score = 62.9 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 18/93 (19%), Positives = 41/93 (44%)

Query: 550 LSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIIC 609
           ++  + +      +   Y   + + L+S+ +  E       +  ++   + K IP + + 
Sbjct: 360 INATKVLFINFGETETAYCLPVLSELRSNGIRAEIYPDKAKMKKQMTYANAKHIPFVALA 419

Query: 610 GDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           GD E +E  I ++   + T Q VS  + I +L+
Sbjct: 420 GDNEIAENKITVKNMETGTQQLVSAKELITLLS 452


>gi|229098875|ref|ZP_04229811.1| Histidyl-tRNA synthetase 2 [Bacillus cereus Rock3-29]
 gi|229105038|ref|ZP_04235691.1| Histidyl-tRNA synthetase 2 [Bacillus cereus Rock3-28]
 gi|229117900|ref|ZP_04247262.1| Histidyl-tRNA synthetase 2 [Bacillus cereus Rock1-3]
 gi|228665557|gb|EEL21037.1| Histidyl-tRNA synthetase 2 [Bacillus cereus Rock1-3]
 gi|228678377|gb|EEL32601.1| Histidyl-tRNA synthetase 2 [Bacillus cereus Rock3-28]
 gi|228684548|gb|EEL38490.1| Histidyl-tRNA synthetase 2 [Bacillus cereus Rock3-29]
          Length = 476

 Score = 62.9 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 74/465 (15%), Positives = 150/465 (32%), Gaps = 64/465 (13%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWK--------IFQTLISY 282
              Y   +   +  +       + L    E+   +     +G +        ++Q +   
Sbjct: 21  HHGYNTLVPTVQTVEAGVFLFLLRLKQFEEEL-NMSIQIPRGTQDILPGTVELWQYIEGQ 79

Query: 283 MRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPM-N 340
            R   +  +Y+EI TP        +          ++   +      +  R+  L+P   
Sbjct: 80  AREICRRYNYKEIRTPIF---EHTELFLRGVGDTTDIVQKEMYSFQDRGERSLTLRPEGT 136

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
            P   +   + +      P +L   G ++R E   +     R R F Q       + +  
Sbjct: 137 APVVRSYVENKMFGDATQPTKLYYIGQMFRYERPQA----GRYRQFVQFGIEAIGSNDPA 192

Query: 401 FNECLKIHNLIISIYKDFGFEKI---MVKLSTRPEKRVGSDALWDDAENIMKG------- 450
            +   ++  L +  Y+  G + I   +  L     ++   DAL    E  +         
Sbjct: 193 IDA--EVIALAVEFYRGMGLKNIKVVLNSLGDAASRQAHRDALIAHFEPRIGEFCSDCQS 250

Query: 451 --------VLDTIKNSSQDRINT-----GVLLGEGAFYGPK-----------FEYILKDA 486
                   +LD  K+ + + + T       L  + A Y  K           FE      
Sbjct: 251 RLEKNPLRILDCKKDRNHELMGTAPSITEYLNEDSAVYYDKVQELLTMMDVPFEKDPNLV 310

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHS--------EKCHPVMIHRAVFGSIERFIGIM 538
            G D+   T+    +    F A    S          E   P M       SIER I  +
Sbjct: 311 RGLDYYQHTVFEIMSEAEGFGAITTLSGGGRYNGLVQEIGGPEMPGIGFAMSIERLIMAL 370

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
            +     LP+    I   V  +   A ++A ++A  L+   LS+E D+ +  +  + +  
Sbjct: 371 -KAENIELPIE-HSIDCYVVALGEKAKDHAAKVAFDLRKAGLSVEKDYLDRKMKAQFKSA 428

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
                  + + G+ E  +  I ++   +   ++V+L      + +
Sbjct: 429 DRLNAKFVAVLGEDELDKGIINLKDMATGGQEEVALDVFASYVAE 473


>gi|325688315|gb|EGD30334.1| alanine--tRNA ligase [Streptococcus sanguinis SK72]
          Length = 872

 Score = 62.9 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/142 (21%), Positives = 58/142 (40%), Gaps = 12/142 (8%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGF-YYDFDKEQPFSS 116
            +EI      R   +  H+  H++  A+ ++        G + E  F  +DF   Q  ++
Sbjct: 552 KLEI--DHSRRHRVMKNHTATHLLHAALHNVLGNHATQAGSLNEVEFLRFDFTHFQAVTA 609

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
           +EL  IE+++ E I             +KA+E+        K          + V +   
Sbjct: 610 EELRAIEQEVNEKIWEALAIETVETDIDKAKEMGAMALFGEKY--------GKEVRVVTI 661

Query: 177 GEW-FDLCRGPHVRSTGQVKKF 197
           G++  +LC G HV +T ++  F
Sbjct: 662 GDYSVELCGGTHVGNTSEIGIF 683


>gi|262341206|ref|YP_003284061.1| serine-tRNA ligase [Blattabacterium sp. (Blattella germanica) str.
           Bge]
 gi|262272543|gb|ACY40451.1| serine-tRNA ligase [Blattabacterium sp. (Blattella germanica) str.
           Bge]
          Length = 431

 Score = 62.9 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/311 (15%), Positives = 106/311 (34%), Gaps = 29/311 (9%)

Query: 137 LKQYLSHEKARELFESKKEAYKVE--ILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQV 194
            K+    E   +      E  K+   +L  I  KEN    + G+  +L +   + S  + 
Sbjct: 29  KKRNFKEEYLIDEILILDEKKKIAQNVLNKILEKENSISKKIGQIINLGKNFEIESLKEK 88

Query: 195 KKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL-----------EESEK 243
             F K  K           + +  ++        +++  +                    
Sbjct: 89  STFLKKEKKNVNVKFNKIVQALEEKLNQIPNIPDEKVKNHFEKNDILFQEGEIHCHIENP 148

Query: 244 RDHRKLAREMDLFH----IAEDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQ 298
             H +L+++  L          G G   +  KG K+ ++LI Y + + I+  Y+E + P 
Sbjct: 149 IPHWELSKKFCLLDSNLGTKICGPGFSVYMEKGAKLQRSLIRYFLDKNIQALYKEYSLPY 208

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++++           Y       K       +     L P      +  +   + +Y +L
Sbjct: 209 LINKES--------GYATGQIPDKENQMYFIEKDNLYLIPTGEVPIMNCYRDKIFTYADL 260

Query: 359 PVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           PV+   + S +R E       + GL R+  F + +     T++  +    ++   + +I 
Sbjct: 261 PVKATTYTSCFRREAGSYGSKVRGLNRLHQFEKVEIIQITTQDSSYFSLEEMILHVKNIL 320

Query: 416 KDFGFEKIMVK 426
           K       +++
Sbjct: 321 KSLDLPFRLIR 331


>gi|251789953|ref|YP_003004674.1| seryl-tRNA synthetase [Dickeya zeae Ech1591]
 gi|247538574|gb|ACT07195.1| seryl-tRNA synthetase [Dickeya zeae Ech1591]
          Length = 431

 Score = 62.9 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 63/188 (33%), Gaps = 10/188 (5%)

Query: 273 WKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M      +  Y+E   P +++ +    +G    +  ++F  K   +   +
Sbjct: 171 ARLHRALAQFMLDLHTGEHGYQEAYVPYLVNHNTLYGTGQLPKFGEDLFHTKPLSEE-SE 229

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
              +AL P        +    +     LP++L      +R+E         GL+RV  F 
Sbjct: 230 TSNYALIPTAEVPLTNLVRDEILDEDALPIKLTAHTPCFRSEAGSYGRDTRGLIRVHQFD 289

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E+      ++      + +        V L +              +W  
Sbjct: 290 KVEMVQIVRPEESMQALEELTGHAEKVLQLLKLPYRKVLLCSGDMGFGSCKTYDLEVWLP 349

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 350 AQNTYREI 357


>gi|303326110|ref|ZP_07356553.1| histidine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
 gi|302864026|gb|EFL86957.1| histidine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
          Length = 418

 Score = 62.9 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 61/409 (14%), Positives = 126/409 (30%), Gaps = 58/409 (14%)

Query: 276 FQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           F  + +  R       + E+ TP V    L+Q+S        ++   +      +  R+ 
Sbjct: 20  FTRMENCARDIFGRYGFVELRTPLVEFTELFQRS---IGEETDVVQKEMYTFPDRKGRSL 76

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
            L+P    G +  +     + RE   RL   G ++R E         R+R F Q +    
Sbjct: 77  TLRPEATAGVMRAYIESGLNSREAVSRLFTTGPMFRYERPQK----GRMRQFHQINCECL 132

Query: 395 CTKEQMFNECLKIHNLII----------SIYKDFGFEKIMVKLSTRPEKRV-GSDALWDD 443
            T+  + +  L I  +                  G  +   +      + + G D     
Sbjct: 133 GTQSPLADAELIIMLMRFLRALGLKDLGLKLNSLGCAECRPRFKEALLEYLRGVDRNALC 192

Query: 444 AENIMK------GVLD-------TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRD 490
            +   +       VLD        + +++   ++         F         +D     
Sbjct: 193 PDCARRVDSNPLRVLDCKQPGCRALTDNAPKLLDYNCPECRAHFETVLEMLRAEDLPLEL 252

Query: 491 WQCGTIQVDFNLPSRFNAFYVN------------SHS---EKCHPVMIHRAVFGSIERFI 535
                  +D+   + F     +                      P +        +ER +
Sbjct: 253 DHRLVRGLDYYCRTTFEVVSGSIGAQSAVAGGGRYDGLIKSLGGPDVPGVGFACGMER-L 311

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK- 594
            +++ +     P +       +  I  +    A  +A  L++  L  E +F   T  +K 
Sbjct: 312 ALLLGDDAETRPDF------YLLGIEEAGRAQAFALAQKLRAAGLRGEMNFS--TGGFKS 363

Query: 595 -IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            +R+         +I G  EA++ ++ I+   S   + +   DAI  L 
Sbjct: 364 LMRQAGKSGARFCLIIGPDEAAQNNVTIKHLDSGEQRSMPQADAILYLQ 412


>gi|302524212|ref|ZP_07276554.1| histidyl-tRNA synthetase [Streptomyces sp. AA4]
 gi|302433107|gb|EFL04923.1| histidyl-tRNA synthetase [Streptomyces sp. AA4]
          Length = 407

 Score = 62.9 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 58/415 (13%), Positives = 117/415 (28%), Gaps = 89/415 (21%)

Query: 275 IFQTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           ++  L  Y        Y   + P +    ++++          +   +    T +     
Sbjct: 7   LYDVLERY-------GYLRYDGPILEQAEVYERKS-----GQEIADQQLYTLTTRGGERL 54

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
           AL+P   P    +     KS    PVR     + +R E         RVR   Q +A +F
Sbjct: 55  ALRPEMTPSVARMIAGHAKSLS-FPVRWYSHPNCHRYERPQR----GRVREHWQINADIF 109

Query: 395 -----------------------CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP 431
                                   T +         + L  ++    G     +      
Sbjct: 110 GSESANCEIEMFELIHDLMGAVGATPDMFAVRVNDRNLLSSALTDVVGISPDHLPQVFAL 169

Query: 432 EKR---------------VG-SDALWDDAENIMKG---VLDTIKNSSQDRIN-------- 464
             R               +G SD  ++     +     +LD +  + +   N        
Sbjct: 170 VDRWEKTSAEEHAASAAEIGLSDKQYEKLAEALGAGPALLDELPEAVKAESNLVKVLSSS 229

Query: 465 ------TGVLLGEG-AFYGPK-FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSE 516
                    L+  G A+Y    FE        R    G  +   NL S F    ++    
Sbjct: 230 AASLVRYEPLIVRGLAYYTSTVFEVFDTSPQNRRALFGGGRYS-NLASMFTKEQISGIGF 288

Query: 517 KCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLK 576
               V +           +  +  +     P   S +   V  +T    + A+++A  L+
Sbjct: 289 GMGDVTL-----------MDFLDTHGLTPQPR--SEVDVTVIPVTEELADPARDVATALR 335

Query: 577 SHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
              L   T      +  ++          ++I G+++ +   + +R   +   Q+
Sbjct: 336 KAGLRTSTPLELRKLGKELTRADKAGAIAVVIVGEEDWAAGRVTVRSLATREQQQ 390


>gi|255026679|ref|ZP_05298665.1| alanyl-tRNA synthetase [Listeria monocytogenes FSL J2-003]
          Length = 879

 Score = 62.9 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 61/143 (42%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFS 115
            ++++   +  R   +  H+  H++  A++    E     G ++  D   +DF      +
Sbjct: 548 DTVKLAVDKVKRRETIKNHTATHLLHRALKDTLGEHVNQAGSLVSPDRLRFDFSHFGQIT 607

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            +EL ++E+ + E I      + + +   +A+EL        K          + V + +
Sbjct: 608 EEELTKMEEIVNEKIWEQINVVIEEMPIAEAKELGAMALFGEKY--------GDIVRVVQ 659

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G++  +LC G HVR+T  +  F
Sbjct: 660 VGKYSIELCGGVHVRNTADIGLF 682


>gi|255569072|ref|XP_002525505.1| histidyl-tRNA synthetase, putative [Ricinus communis]
 gi|223535184|gb|EEF36863.1| histidyl-tRNA synthetase, putative [Ricinus communis]
          Length = 886

 Score = 62.9 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 78/203 (38%), Gaps = 16/203 (7%)

Query: 446 NIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSR 505
            I+   L+  K   +   +  +  G   + G  FE + K   G+  Q G+I       + 
Sbjct: 695 EILFDALEKSKCIDKVAFDLSLARGLDYYTGVIFEAVFK---GKT-QVGSIAAGGRYDNL 750

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA- 564
              F       K  P +    V   IER   IM E+   N     +  Q +++ +   + 
Sbjct: 751 IGMF-----GTKQVPAV---GVSLGIERVFTIMEED--QNQTSRPTETQVLLSILGDKSK 800

Query: 565 VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRF 624
           +  A E+A  L +  L  E        +  I      KIPI+++ GDKE  +  + I+  
Sbjct: 801 LPLAAELAGELWNAKLKAEYTVST-RFSKHIDRAKESKIPIMVLVGDKELEKGIVKIKNL 859

Query: 625 GSTTTQKVSLLDAIPILTKESLP 647
            +T  ++V   + +  L  E + 
Sbjct: 860 ETTVEKEVPRSNFVEELKLELMK 882


>gi|33602167|ref|NP_889727.1| alanyl-tRNA synthetase [Bordetella bronchiseptica RB50]
 gi|41018190|sp|Q7WHL6|SYA_BORBR RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|33576605|emb|CAE33683.1| alanyl-tRNA synthetase [Bordetella bronchiseptica RB50]
          Length = 874

 Score = 62.9 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 58/131 (44%), Gaps = 9/131 (6%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKM 126
           R+  V  HS  H+M +A++ +        G +++ D   +DF  + P +++++A++E  +
Sbjct: 555 RARTVRNHSATHLMHKALREVLGAHVQQRGSLVDPDKTRFDFAHDAPMTAEQIARVEAIV 614

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGP 186
              +  +     + ++++ A +         K          + V +   G   +LC G 
Sbjct: 615 NAEVLANQATEAKVMAYDDAVKGGAMALFGEKY--------GDTVRVLDIGFSRELCGGT 666

Query: 187 HVRSTGQVKKF 197
           HVR TG +  F
Sbjct: 667 HVRRTGDIGLF 677


>gi|33592894|ref|NP_880538.1| alanyl-tRNA synthetase [Bordetella pertussis Tohama I]
 gi|41018186|sp|Q7VXE1|SYA_BORPE RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|33572542|emb|CAE42122.1| alanyl-tRNA synthetase [Bordetella pertussis Tohama I]
 gi|332382307|gb|AEE67154.1| alanyl-tRNA synthetase [Bordetella pertussis CS]
          Length = 874

 Score = 62.9 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 58/131 (44%), Gaps = 9/131 (6%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKM 126
           R+  V  HS  H+M +A++ +        G +++ D   +DF  + P +++++A++E  +
Sbjct: 555 RARTVRNHSATHLMHKALREVLGAHVQQRGSLVDPDKTRFDFAHDAPMTAEQIARVEAIV 614

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGP 186
              +  +     + ++++ A +         K          + V +   G   +LC G 
Sbjct: 615 NAEVLANQATEAKVMAYDDAVKGGAMALFGEKY--------GDTVRVLDIGFSRELCGGT 666

Query: 187 HVRSTGQVKKF 197
           HVR TG +  F
Sbjct: 667 HVRRTGDIGLF 677


>gi|33597425|ref|NP_885068.1| alanyl-tRNA synthetase [Bordetella parapertussis 12822]
 gi|41018188|sp|Q7W6N4|SYA_BORPA RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|33573852|emb|CAE38162.1| alanyl-tRNA synthetase [Bordetella parapertussis]
          Length = 874

 Score = 62.9 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 58/131 (44%), Gaps = 9/131 (6%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKM 126
           R+  V  HS  H+M +A++ +        G +++ D   +DF  + P +++++A++E  +
Sbjct: 555 RARTVRNHSATHLMHKALREVLGAHVQQRGSLVDPDKTRFDFAHDAPMTAEQIARVEAIV 614

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGP 186
              +  +     + ++++ A +         K          + V +   G   +LC G 
Sbjct: 615 NAEVLANQATEAKVMAYDDAVKGGAMALFGEKY--------GDTVRVLDIGFSRELCGGT 666

Query: 187 HVRSTGQVKKF 197
           HVR TG +  F
Sbjct: 667 HVRRTGDIGLF 677


>gi|261418411|ref|YP_003252093.1| histidyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|319767630|ref|YP_004133131.1| histidyl-tRNA synthetase [Geobacillus sp. Y412MC52]
 gi|261374868|gb|ACX77611.1| histidyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|317112496|gb|ADU94988.1| histidyl-tRNA synthetase [Geobacillus sp. Y412MC52]
          Length = 426

 Score = 62.9 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 68/432 (15%), Positives = 125/432 (28%), Gaps = 65/432 (15%)

Query: 265 VIFWHRKGWK--------IFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
           + F   +G +         +Q +    R       Y EI TP        +         
Sbjct: 1   MAFQIPRGTQDVLPGDTEKWQYVEHVARNLCSRYGYREIRTPIF---EHTELFLRGVGDT 57

Query: 316 ANMFAVKCADDTIKDLRTFALKPM-NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS 374
            ++   +      K  R   L+P    P   A   H L      P++L   G ++R E  
Sbjct: 58  TDIVQKEMYTFEDKGGRALTLRPEGTAPVVRAFVEHKLYGSPHQPLKLYYSGPMFRYERP 117

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG--------------- 419
            +     R R F Q       + +   +   ++  L + IY+  G               
Sbjct: 118 EA----GRFRQFVQFGVEALGSSDPAIDA--EVMALAMHIYEALGLKRIRLVINSLGDLD 171

Query: 420 -FEKIMVKLSTRPEKRVGS---DALWDDAENIMKGVLDTIKNSSQD------RINTGVLL 469
                   L      R+     D       N ++ +LD  K+   +       I   +  
Sbjct: 172 SRRAHREALVRHFSSRIHELCPDCQTRLHTNPLR-ILDCKKDRDHELMATAPSILDYLNE 230

Query: 470 GEGAFY----------GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS---- 515
              A++          G  F    +   G D+   T     +    F A           
Sbjct: 231 DSRAYFEKVKQYLTNLGIPFVIDSRLVRGLDYYNHTTFEIMSEAEGFGAAATLCGGGRYN 290

Query: 516 ----EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
               E   P         SIER +  +  + +G      S +   V  +   A + A  +
Sbjct: 291 GLVQEIGGPETPGIGFALSIERLLAAL--DAEGVELPVESGLDCYVVAVGERAKDEAVRL 348

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
              L+   L ++ D+    +  +++         + I GD+E   +   ++   S     
Sbjct: 349 VYALRRSGLRVDQDYLGRKLKAQLKAADRLGASFVAIIGDEELERQEAAVKHMASGEQTN 408

Query: 632 VSLLDAIPILTK 643
           V L +    L +
Sbjct: 409 VPLGELAHFLHE 420


>gi|254931439|ref|ZP_05264798.1| alanyl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|293582990|gb|EFF95022.1| alanyl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|332311946|gb|EGJ25041.1| Alanyl-tRNA synthetase [Listeria monocytogenes str. Scott A]
          Length = 879

 Score = 62.9 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 61/143 (42%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFS 115
            ++++   +  R   +  H+  H++  A++    E     G ++  D   +DF      +
Sbjct: 548 DTVKLAVDKVKRRETIKNHTATHLLHRALKDTLGEHVNQAGSLVSPDRLRFDFSHFGQIT 607

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            +EL ++E+ + E I      + + +   +A+EL        K          + V + +
Sbjct: 608 EEELTKMEEIVNEKIWEQINVVIEEMPIAEAKELGAMALFGEKY--------GDIVRVVQ 659

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G++  +LC G HVR+T  +  F
Sbjct: 660 VGKYSIELCGGVHVRNTADIGLF 682


>gi|153810792|ref|ZP_01963460.1| hypothetical protein RUMOBE_01176 [Ruminococcus obeum ATCC 29174]
 gi|149833188|gb|EDM88270.1| hypothetical protein RUMOBE_01176 [Ruminococcus obeum ATCC 29174]
          Length = 683

 Score = 62.9 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 59/142 (41%), Gaps = 10/142 (7%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSS 116
           ++ +   E  R      HS  H++ +A++++        G  +  D   +DF   Q  + 
Sbjct: 353 TVTLKVNEQARRDTEKNHSATHLLQKALKTVLGSHVEQKGSLVTPDRLRFDFAHFQAMTP 412

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
           +E+AQ E  + + I    P +   +  E+A++         K          + V +   
Sbjct: 413 EEIAQTETLVNKEIQAALPVVTDVMDIEEAKKSGAMALFGEKY--------DQKVRVVSM 464

Query: 177 GEW-FDLCRGPHVRSTGQVKKF 197
           G++  +LC G HV++T  +  F
Sbjct: 465 GDFSKELCGGTHVKNTSSIMLF 486


>gi|66809557|ref|XP_638501.1| glycyl-tRNA synthetase [Dictyostelium discoideum AX4]
 gi|60467108|gb|EAL65146.1| glycyl-tRNA synthetase [Dictyostelium discoideum AX4]
          Length = 678

 Score = 62.9 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 18/100 (18%), Positives = 41/100 (41%), Gaps = 2/100 (2%)

Query: 546 LPLWLSPIQAIVTTIT--SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           LP  ++P++A +  +T       + Q I+  LK  ++S + D     I  K        +
Sbjct: 556 LPAIIAPVKASILPLTSSDRIAPFVQTISKALKEANISTKVDDTGNAIGRKYARTDEIGV 615

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           P  +    +   + ++ +R   +T   ++ + +    L K
Sbjct: 616 PFGVTIDFQTVEDNTVTLRERDTTKQVRIPISELASTLRK 655



 Score = 41.3 bits (95), Expect = 0.51,   Method: Composition-based stats.
 Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 2/66 (3%)

Query: 335 ALKPMNCPGHVAVF-NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
            L+P    G    F      + ++LP   A+ G+ +RNE +    GL+RVR FT  +   
Sbjct: 242 YLRPETAQGIFTNFGKLYEYNGKKLPFAAAQIGNAFRNEIAPR-AGLLRVREFTMAEIEH 300

Query: 394 FCTKEQ 399
           F     
Sbjct: 301 FVNPNN 306


>gi|324019016|gb|EGB88235.1| seryl-tRNA synthetase [Escherichia coli MS 117-3]
          Length = 430

 Score = 62.9 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 64/188 (34%), Gaps = 10/188 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M     +   Y E   P +++Q     +G    +  ++F  +  ++   D
Sbjct: 170 ARMHRALSQFMLDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLFHTRPLEEEA-D 228

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
              +AL P        +    +    +LP+++      +R+E         GL+R+  F 
Sbjct: 229 TSNYALIPTAEVPLTNLVRGEIIDEDDLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFD 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E       ++      + +  G     + L T              +W  
Sbjct: 289 KVEMVQIVRPEDSMAALEEMTGHAEKVLQLRGLPYRKIILCTGDMGFGACKTYDLEVWIP 348

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 349 AQNTYREI 356


>gi|117924380|ref|YP_864997.1| seryl-tRNA synthetase [Magnetococcus sp. MC-1]
 gi|166222739|sp|A0L6J8|SYS_MAGSM RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|117608136|gb|ABK43591.1| seryl-tRNA synthetase [Magnetococcus sp. MC-1]
          Length = 430

 Score = 62.9 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 44/341 (12%), Positives = 104/341 (30%), Gaps = 37/341 (10%)

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW- 179
           ++E+   +         ++  + E A +LFE  +      +   +   E+V    +G+  
Sbjct: 43  EVEQLQSQRNTLSKEIGQRKAAREDASDLFEQMQ-----RVGPRLKELESVLAELEGQVE 97

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLE 239
             +   P+   +       +   V    W          ++ G       E+ + L  L+
Sbjct: 98  AIIVALPNTPHSSVPDGLGEQDNVEVRRWSPSGGEGGDPQVLGFEAKNHWEIGEALGILD 157

Query: 240 ESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK--DDYEEINTP 297
                                 GS    +   G ++ + L +YM         Y+EI  P
Sbjct: 158 FEAGAAVA--------------GSRFTVFKGVGARLSRALANYMLDLHTGSHGYQEILPP 203

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            + +      +G    +  ++F  +           + + P        +    +    +
Sbjct: 204 VLTNAECLFGTGQLPKFEEDLFRTRDD--------AYYMIPTAEVPVTNLVREQILEDSQ 255

Query: 358 LPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           LP+R+  + + +R E   +     GL+R   F + +       E+ +    ++      +
Sbjct: 256 LPMRMTAWTNCFRREAGSAGKDTRGLIRQHQFDKVELVQIRRPEESYAALEELTGHAEQV 315

Query: 415 YKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
            K  G     V L +              +W   +   + +
Sbjct: 316 LKGLGLPFRTVVLCSGDMGFGASKTYDIEVWLPGQGKYREI 356


>gi|327467316|gb|EGF12816.1| histidine--tRNA ligase [Streptococcus sanguinis SK330]
          Length = 426

 Score = 62.9 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 56/418 (13%), Positives = 126/418 (30%), Gaps = 68/418 (16%)

Query: 269 HRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
             +    +Q +  + R+  +  +Y EI TP       ++          ++   +  D  
Sbjct: 13  LPQESAKWQYVEDFARKTFRKYNYGEIRTPIF---EHYEVISRSVGDTTDIVTKEMYDFY 69

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKS-----YRELPVRLAEFGSVYRNEPSGSLHGLMR 382
            K  R   L+P    G   V    +++       + PV++   GS++R E   +     R
Sbjct: 70  DKGDRHITLRP---EGTAPVVRSYVENKLFAPEVQKPVKVYYMGSMFRYERPQA----GR 122

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD------------FGFEKIMVKLSTR 430
           +R F Q  A  F +        +++  +    +KD             G  +        
Sbjct: 123 LREFHQIGAECFGSSNPA--TDVEMIAMAAQFFKDIGITNVSLELNSLGNPESRAAYRQA 180

Query: 431 PEKRVG------SDALWDDAENIMKGVLDTIKNSSQDRIN------TGVLLGEGAFYGP- 477
               +       S       E     VLD+ +   +  +         +     A++   
Sbjct: 181 LIDYLTPLKPSLSADSQRRLEENPLRVLDSKEPEDKAAVEGAPSILDYLDEESSAYFAAV 240

Query: 478 -------------------KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC 518
                                +Y          +    Q+      R++         + 
Sbjct: 241 RSMLETLQIPYVINTNMVRGLDYYNHTIFEFTTEVAGSQLTICAGGRYDGLVAYFGGPET 300

Query: 519 HPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSH 578
             V     +    ER + ++  + +G      + +   V  + + A   A E+   L++ 
Sbjct: 301 PGVGFGMGL----ERLLLVL--DKQGVELPIETALDVYVAVLGAGANGRALELVQALRAQ 354

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
             + E D+ +  +  + +   I +   +I  G+ E     + ++   +     VSL  
Sbjct: 355 GFAAERDYLDRKLKAQFKSADIFRAKTLITLGESELESGQVTVKNNHNREEIIVSLDQ 412


>gi|91782396|ref|YP_557602.1| seryl-tRNA synthetase [Burkholderia xenovorans LB400]
 gi|123168824|sp|Q143D9|SYS_BURXL RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|91686350|gb|ABE29550.1| seryl-tRNA synthetase [Burkholderia xenovorans LB400]
          Length = 431

 Score = 62.9 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 75/222 (33%), Gaps = 14/222 (6%)

Query: 242 EKRDHRKLAREMDL-FHIAEDGSGVIFWHRKG--WKIFQTLISYMRRKI--KDDYEEINT 296
           E +DH  +   + L F      SG  F   +G   ++ + L  +M         Y EI T
Sbjct: 135 EVKDHVDVGAPLGLDFETGAKLSGARFTMLRGQIARLHRALAQFMIDTHTQHHGYTEIYT 194

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +++  +   +G    +  +MF V+   D     +       +           +    
Sbjct: 195 PYIVNPEILYGTGQLPKFADDMFRVEKGGDENTVTQYLIS--TSEISLTNTVRDSILEAD 252

Query: 357 ELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
            LP++L      +R+E         GL+R   F + +       E  ++   ++     +
Sbjct: 253 ALPIKLTAHSPCFRSEAGSYGRDTRGLIRQHQFDKVEMVQIVAPETSYDALEQMVGHAET 312

Query: 414 IYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
           I +       ++ L T              +W  A+N  + +
Sbjct: 313 ILQKLELPYRVITLCTGDMGFSAAKTYDLEVWVPAQNTYREI 354


>gi|311105349|ref|YP_003978202.1| alanyl-tRNA synthetase [Achromobacter xylosoxidans A8]
 gi|310760038|gb|ADP15487.1| alanyl-tRNA synthetase [Achromobacter xylosoxidans A8]
          Length = 874

 Score = 62.9 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/131 (22%), Positives = 60/131 (45%), Gaps = 9/131 (6%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKM 126
           R+  V  HS  H+M +A++ +        G +++ D   +DF ++ P +++++A++E  +
Sbjct: 555 RARTVRNHSATHLMHKALRQVLGAHVQQRGSLVDPDKTRFDFAQDAPLTAEQIARVEAIV 614

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGP 186
              I  + P + Q ++++ A +         K          + V +   G   +LC G 
Sbjct: 615 NAEILANQPTVAQVMAYDDAVKGGAMALFGEKY--------GDTVRVLDIGFSRELCGGT 666

Query: 187 HVRSTGQVKKF 197
           HV  TG +  F
Sbjct: 667 HVSRTGDIGLF 677


>gi|187923045|ref|YP_001894687.1| seryl-tRNA synthetase [Burkholderia phytofirmans PsJN]
 gi|238689594|sp|B2T1A6|SYS_BURPP RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|187714239|gb|ACD15463.1| seryl-tRNA synthetase [Burkholderia phytofirmans PsJN]
          Length = 431

 Score = 62.9 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/222 (16%), Positives = 75/222 (33%), Gaps = 14/222 (6%)

Query: 242 EKRDHRKLAREMDL-FHIAEDGSGVIFWHRKG--WKIFQTLISYMRRKI--KDDYEEINT 296
           E +DH  +   + L F      SG  F   +G   ++ + L  +M      +  Y E+ T
Sbjct: 135 EVKDHVDVGTPLGLDFETGAKLSGARFTMLRGQIARLHRALAQFMIDTHTQQHGYTEVYT 194

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +++  +   +G    +  +MF V+   D     +       +           +    
Sbjct: 195 PYIVNPEILYGTGQLPKFADDMFRVEKGGDENTVTQYLIS--TSEISLTNTVRDSILEAD 252

Query: 357 ELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
            LP++L      +R+E         GL+R   F + +       E  +    ++     +
Sbjct: 253 ALPIKLTAHSPCFRSEAGSYGRDTRGLIRQHQFDKVEMVQIVAPETSYAALEEMVGHAET 312

Query: 414 IYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
           I +       ++ L T              +W  A+N  + +
Sbjct: 313 ILQKLELPYRVITLCTGDMGFSAAKTYDLEVWVPAQNTYREI 354


>gi|47093426|ref|ZP_00231191.1| alanyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
 gi|226224105|ref|YP_002758212.1| alanyl-tRNA synthetase [Listeria monocytogenes Clip81459]
 gi|254824437|ref|ZP_05229438.1| alanyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
 gi|254852128|ref|ZP_05241476.1| alanyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|300764830|ref|ZP_07074820.1| alanyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
 gi|47018205|gb|EAL08973.1| alanyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
 gi|225876567|emb|CAS05276.1| alanyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           CLIP 80459]
 gi|258605431|gb|EEW18039.1| alanyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|293593673|gb|EFG01434.1| alanyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
 gi|300514506|gb|EFK41563.1| alanyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
 gi|328465542|gb|EGF36771.1| alanyl-tRNA synthetase [Listeria monocytogenes 1816]
          Length = 879

 Score = 62.9 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 61/143 (42%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFS 115
            ++++   +  R   +  H+  H++  A++    E     G ++  D   +DF      +
Sbjct: 548 DTVKLAVDKVKRRETIKNHTATHLLHRALKDTLGEHVNQAGSLVSPDRLRFDFSHFGQIT 607

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            +EL ++E+ + E I      + + +   +A+EL        K          + V + +
Sbjct: 608 EEELTKMEEIVNEKIWEQINVVIEEMPIAEAKELGAMALFGEKY--------GDIVRVVQ 659

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G++  +LC G HVR+T  +  F
Sbjct: 660 VGKYSIELCGGVHVRNTADIGLF 682


>gi|302062686|ref|ZP_07254227.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. tomato K40]
          Length = 58

 Score = 62.9 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 23/47 (48%)

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           EH++ K+P +++ GD+E   +++ +R         + +      L +
Sbjct: 1   EHTLLKVPYLLVIGDREVEMQTVAVRTREGADLGSMPVAQFAEFLAQ 47


>gi|299535706|ref|ZP_07049027.1| alanyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
 gi|298728906|gb|EFI69460.1| alanyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
          Length = 886

 Score = 62.9 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/144 (20%), Positives = 63/144 (43%), Gaps = 10/144 (6%)

Query: 56  EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPF 114
           E +++ +   D R+L +  H+  HIM  A++ +  +     G  +  D   +DF      
Sbjct: 556 EDAVQAVVNRDDRNLIIKNHTATHIMQRALKDVLGDHVNQAGSYVGPDRLRFDFSHFGQV 615

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
           + +EL QIE+ + E +  D   + +    ++A+ +        K          + V + 
Sbjct: 616 TKEELQQIERIVNEKVWDDIEVVIEEKGIDEAKAMGAMALFGEKY--------GDVVRVV 667

Query: 175 RQGEW-FDLCRGPHVRSTGQVKKF 197
             G++  +LC G HV+ + ++  F
Sbjct: 668 SIGDYSIELCGGIHVKRSSEIGFF 691


>gi|169350062|ref|ZP_02867000.1| hypothetical protein CLOSPI_00802 [Clostridium spiroforme DSM 1552]
 gi|169293275|gb|EDS75408.1| hypothetical protein CLOSPI_00802 [Clostridium spiroforme DSM 1552]
          Length = 869

 Score = 62.9 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/147 (18%), Positives = 60/147 (40%), Gaps = 12/147 (8%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIED-GFYYDFDKEQPFSS 116
           ++EI   ++ R      H+  HI+  A++ +        G  ++D    +DF   +  ++
Sbjct: 546 TLEI--DKEKRGKITANHTATHILQAALKEVIGSHINQAGSYVDDNRLRFDFTHFEKITN 603

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
           ++L  +E+K+ ++I +        +S E+A               L      + V +   
Sbjct: 604 EQLKAVEQKVNDVIFKGIDVEIANMSKEEALA--------SGAMALFDEKYGDTVRVVSV 655

Query: 177 GEW-FDLCRGPHVRSTGQVKKFFKLMK 202
           G +  +LC G HV ++  +  F    +
Sbjct: 656 GNYSKELCGGCHVTNSSNIGLFKIETE 682


>gi|15605705|ref|NP_213082.1| histidyl-tRNA synthetase [Aquifex aeolicus VF5]
 gi|7674344|sp|O66522|SYH_AQUAE RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|2982856|gb|AAC06477.1| histidyl-tRNA synthetase [Aquifex aeolicus VF5]
          Length = 403

 Score = 62.9 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 63/398 (15%), Positives = 128/398 (32%), Gaps = 44/398 (11%)

Query: 273 WKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
            K F+ +    R+ +K  ++EEI  P V    L+Q+S        ++   +      +  
Sbjct: 17  AKKFRKISDTARKILKLYNFEEIILPVVEYAELFQRSVGET---TDIVQKEMFVFEDRKG 73

Query: 332 RTFALKPMNCPG----HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
           R  AL+P    G     +    + L+ Y +L     E G ++R E   +     R R F 
Sbjct: 74  RKLALRPEGTAGTVRAFIQHKLYALRPYVKL---FYE-GPMFRYERPQA----GRYRQFH 125

Query: 388 QDDAHVFCTKEQMFN-ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
           Q  A VF   E   + E +KI   I+      G    +  L  + ++    +AL +    
Sbjct: 126 QIGAEVFGVAEPHADAEIIKIVYDILQALGIKGVVVEINSLGCKKDREAYREALLNYLTG 185

Query: 447 IMKGVLDTI----------------------KNSSQDRINTGVLLGEGAFYGPKFEYILK 484
           + + +                             +   I+         +   K      
Sbjct: 186 VKEELCSDCISRMDRNPLRVLDCKVETCKVAVREAPKMIDFLCDECREHYEKLKNYLKAL 245

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVN-----SHSEKCHPVMIHRAVFGSIERFIGIMI 539
           D   R+       +D+   + F A             +   ++       +      + +
Sbjct: 246 DIPFRENYNLVRGLDYYTRTVFEAVSDELGLTLIAGGRYDYLVEELGGPPTPALGFALGV 305

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           E     LP      +           EYA  +A++L+     +E  +R   +  ++    
Sbjct: 306 ERLMLLLPDEEEKEEVYFVIPFGDVHEYALRVADILRKKGKVVEYSYRKGGLKKQLEFAD 365

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
              +   +I G+ E   + + I+   +   ++V L + 
Sbjct: 366 KLGVKYAVIIGEDEVKNQEVTIKDMETGEQRRVKLSEL 403


>gi|194396786|ref|YP_002038709.1| histidyl-tRNA synthetase [Streptococcus pneumoniae G54]
 gi|229558746|sp|B5E3C8|SYH_STRP4 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|194356453|gb|ACF54901.1| histidyl-tRNA synthetase [Streptococcus pneumoniae G54]
          Length = 429

 Score = 62.9 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 59/404 (14%), Positives = 125/404 (30%), Gaps = 56/404 (13%)

Query: 276 FQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           +Q +  + R   K  +Y E+ TP       ++          ++   +  D   K  R  
Sbjct: 20  WQYVEGFAREIFKRYNYAEVRTPIF---EHYEVISRSVGDTTDIVTKEMYDFYDKGDRHI 76

Query: 335 ALKPMNCPGHVAVFNHGLKS-----YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
            L+P    G   V    +++       + P +    G ++R E   +     R+R F Q 
Sbjct: 77  TLRP---EGTAPVVRSYVENKLFAPEVQKPSKFYYMGPMFRYERPQA----GRLRQFHQI 129

Query: 390 DAHVFCTKEQM-FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWD------ 442
               F +         + +    +      G +  +  L     +     AL D      
Sbjct: 130 GVECFGSSNPATDVXTIVMAAHFLKEIGIQGVKLHLNTLGNPESRAAYRQALIDYLTPLK 189

Query: 443 -----DAENIMKG----VLDTIKNSSQDR-------INTGVLLGEGAFYGPK-------F 479
                D++  ++     VLD+ +   +         ++      +  F   +        
Sbjct: 190 ETLSKDSQRRLEENPLRVLDSKEKEDKVAVENAPSILDFLDEESQAHFDAVRQMLENLGV 249

Query: 480 EYILKDAI--GRDWQCGTIQVDFNLPSRFNAFYVN---SHSEKCHPVMIHRAVFG---SI 531
           +YI+   +  G D+   TI          +              +      A FG    +
Sbjct: 250 DYIIDTNMVRGLDYYNHTIFEFITEIEGNDLTVCAGGRYDGLVAYFGGPETAGFGFGLGV 309

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           ER + I+    +G      + +   +  +   A   A E+   L+      E D+ N  +
Sbjct: 310 ERLLLIL--EKQGVALPIENALDVYIAVLGDGANVKALELVQALRQQGFKAERDYLNRKL 367

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
             + +   +     +I  G+ E     + ++   +    +VSL 
Sbjct: 368 KAQFKSADVFATKTLITLGESEVESGQVTVKNNQTREEVQVSLE 411


>gi|328954350|ref|YP_004371684.1| Seryl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
 gi|328454674|gb|AEB10503.1| Seryl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
          Length = 425

 Score = 62.9 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/221 (16%), Positives = 82/221 (37%), Gaps = 21/221 (9%)

Query: 244 RDHRKLAREMDL--FHIAEDGSGVIFWHRKG--WKIFQTLISYMRRKI--KDDYEEINTP 297
           R H ++   + +  F  A   +G  F   KG   ++ + LI++M      K  Y E+  P
Sbjct: 137 RPHWEIGEYLGILDFETAAKITGARFALLKGPASRLERALINFMLDLHTQKHGYLEVWPP 196

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++++   Q +G    ++ ++F ++  D        + L P        +    + +   
Sbjct: 197 FIINRASAQGTGQLPKFKEDLFKLEDWD--------YYLTPTAEVPVTNIHRDEILAEEA 248

Query: 358 LPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           LP+    +   +R+E       + GL+R   F + +   F   E  +    K+ +    +
Sbjct: 249 LPISYTAYTPCFRSEAGSHGKDVRGLIRQHQFDKVELVKFTAPESSYEALEKLLSDAEEV 308

Query: 415 YKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENIMKGV 451
            ++      +V L T              +W   + + + +
Sbjct: 309 LQELELPYQVVVLCTGDMGFAAAKTYDIEVWLPGQGLYREI 349


>gi|312898436|ref|ZP_07757826.1| seryl-tRNA synthetase [Megasphaera micronuciformis F0359]
 gi|310620355|gb|EFQ03925.1| seryl-tRNA synthetase [Megasphaera micronuciformis F0359]
          Length = 425

 Score = 62.9 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/244 (14%), Positives = 85/244 (34%), Gaps = 22/244 (9%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAEDG----SGVIFWHRKGWKIF 276
           G   +   E+ ++        E ++H ++   + +      G    S   F+   G ++ 
Sbjct: 114 GNDDSDNPEVRKWGDVTTFDFEAKNHWEIGEHLGILDAERAGKVAGSRFYFYLGAGARLE 173

Query: 277 QTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           + + ++M     +   Y E+  P ++++     +G    +  +MF +        + +  
Sbjct: 174 RAVYNFMLDMHTEVDGYTEVIPPYIVNRDSMLGTGQLPKFYEDMFRI--------EGQEM 225

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDA 391
            + P         +   +    +LPV L      +R E   +     GL+R   F + + 
Sbjct: 226 FMIPTAEVPLTNYYRGEIIDGNKLPVYLTAMTPCFRAEAGSAGRDTRGLIRQHQFHKVEM 285

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG----SDALWDDAENI 447
             +   E  ++E  K+ N   +I +       +V L T              +W  A+  
Sbjct: 286 VKYVAPETSYDELDKLTNNAEAILQALKLPYHVVCLCTGDIGFSAAKTFDVEVWFPAQGK 345

Query: 448 MKGV 451
            + +
Sbjct: 346 YREI 349


>gi|303240067|ref|ZP_07326588.1| seryl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
 gi|302592336|gb|EFL62063.1| seryl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
          Length = 423

 Score = 62.9 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/236 (15%), Positives = 87/236 (36%), Gaps = 22/236 (9%)

Query: 220 IYGTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWK 274
             G   +   E+ ++    + + E + H  +  ++ +   +      G+   F+   G +
Sbjct: 112 PDGDTDDDNVEIRKWGEPKKFNFEPKAHWDIGEKLGILDFSAAAKVTGARFTFYKGLGAR 171

Query: 275 IFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           + ++L+++M      K  Y E+  P ++ ++    +G    +  + F V   D       
Sbjct: 172 LERSLMNFMLDLHTGKHGYTEVFPPFMVHRNSMIGTGQLPKFEEDAFKVANND------- 224

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQD 389
            + L P        ++   +   +ELP++ A + + +R E   +     GL+R   F + 
Sbjct: 225 -YFLIPTAEVPVTNMYREQILDAKELPIKHAAYSACFRAEAGAAGRDTRGLIRQHQFNKV 283

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALW 441
           +   F T E  + E   +      + +  G    +VK+                +W
Sbjct: 284 ELVKFTTPETSYEELEALTRDAEEVLQILGIPYRVVKICVGDLGFTAAMKYDIEVW 339


>gi|332291633|ref|YP_004430242.1| seryl-tRNA synthetase [Krokinobacter diaphorus 4H-3-7-5]
 gi|332169719|gb|AEE18974.1| seryl-tRNA synthetase [Krokinobacter diaphorus 4H-3-7-5]
          Length = 423

 Score = 62.9 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 69/197 (35%), Gaps = 16/197 (8%)

Query: 240 ESEKRDHRKLAREMDLFHIA----EDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEI 294
               + H +LA++ D+          G+G   +  KG ++ + LI+Y + +  +  Y E 
Sbjct: 137 HEAAQPHWELAKKYDIIDFELGTKIAGAGFPVYKGKGARLQRALIAYFLDKNTEAGYTEY 196

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
             P ++++           +       K             L P        +F   L++
Sbjct: 197 QVPHLVNE--------ASGFGTGQLPDKEGQMYHVTEDDLYLIPTAEVPVTNMFRGDLRN 248

Query: 355 YRELPVRLAEFGSVYRNEPSG---SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI 411
           + ELP+    +   +R E       + GL R+  F + +       E        + + +
Sbjct: 249 HNELPITCTGYTPCFRREAGSYGAHVRGLNRLHQFDKVEIVRIERPEDSAAALDGMVDHV 308

Query: 412 ISIYKDFGFEKIMVKLS 428
            +I  +      +++L 
Sbjct: 309 KTILDELEMPYRILRLC 325


>gi|73748415|ref|YP_307654.1| seryl-tRNA synthetase [Dehalococcoides sp. CBDB1]
 gi|147669195|ref|YP_001214013.1| seryl-tRNA synthetase [Dehalococcoides sp. BAV1]
 gi|289432463|ref|YP_003462336.1| seryl-tRNA synthetase [Dehalococcoides sp. GT]
 gi|123619533|sp|Q3ZWY0|SYS_DEHSC RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|189083567|sp|A5FRN4|SYS_DEHSB RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|73660131|emb|CAI82738.1| seryl-tRNA synthetase [Dehalococcoides sp. CBDB1]
 gi|146270143|gb|ABQ17135.1| seryl-tRNA synthetase [Dehalococcoides sp. BAV1]
 gi|288946183|gb|ADC73880.1| seryl-tRNA synthetase [Dehalococcoides sp. GT]
          Length = 413

 Score = 62.9 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/210 (18%), Positives = 74/210 (35%), Gaps = 18/210 (8%)

Query: 242 EKRDHRKLAREMDLFHIAE--DGSGVIFWHRKGW--KIFQTLISYMRRKIKD--DYEEIN 295
             + H +L   +D+         SG  F+  KG   ++ + LI++M        DY EI 
Sbjct: 126 TPKPHWELGEALDIIDFDRGIKLSGSRFYILKGAGARLQRALIAFMLDLHTRKHDYTEIY 185

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
            P ++ +     SG+   +  N++              +   P        +    + S 
Sbjct: 186 PPYMIKRECLVASGNLPKFADNLY--------HDAEEDYWWVPTAEAPLTNLHRDEILSA 237

Query: 356 RELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
            +LP+    + + +R E       + G+ R+  F + + + +C  E  F E  K+     
Sbjct: 238 EQLPIHYVAYTACFRREKMSAGKDVRGIKRLHQFDKVELYKYCKPEDSFAELEKMVADAE 297

Query: 413 SIYKDFGFEKIMVKLSTRPEKRVGSDALWD 442
            I          +K     +   GS   +D
Sbjct: 298 EIADAL-KIPYRLKQLVTADISFGSAKSYD 326


>gi|299140764|ref|ZP_07033902.1| histidine--tRNA ligase [Prevotella oris C735]
 gi|298577730|gb|EFI49598.1| histidine--tRNA ligase [Prevotella oris C735]
          Length = 454

 Score = 62.9 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 59/462 (12%), Positives = 137/462 (29%), Gaps = 103/462 (22%)

Query: 270 RKGWK------------IFQTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRAN 317
            KG +            IF T+           +++I TP +              Y   
Sbjct: 8   PKGTRDFGPEEMAKRNYIFNTIKDVY---ALYGFQQIETPAM-----ETLQTLMGKYGEE 59

Query: 318 MFAV------------KCADDTIKDLRTFALKPMNCP--------GHVAVFNHGLKSYRE 357
              +            K  D+ + +     L    C            A +    +   +
Sbjct: 60  GDKLLFKILNSGDYLNKVTDEELSERNPLHLASKLCEKGLRYDLTVPFARYVVMHREELQ 119

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           LP +  +   V+R +         R R F Q DA V  +        +++  ++ +++  
Sbjct: 120 LPFKRYQIQPVWRADRPQK----GRYREFYQCDADVVGSD--SLLNEVELMQIVDTVFTK 173

Query: 418 FGFEKIMVKLSTRPEKRVGS--------------------------------DALWDDAE 445
           FG    +   + +    +                                  D + D+A 
Sbjct: 174 FGVRVQIKINNRKILTGIAEVIGEADKIVDITVAIDKLDKIGLDNVNAELKADGISDEAI 233

Query: 446 NIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK-FE--YILKDAIGRDWQCGTIQVDFNL 502
             ++ ++ +++ +++D++NT   + EG+  G K  E    + D +        IQ+D  L
Sbjct: 234 EKLQPII-SLEGTNEDKLNTIAKVLEGSDVGLKGVEETKFILDTLKVTGLNNEIQLDLTL 292

Query: 503 PSRFNAFYVN-SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPL------------- 548
               N +       +     M      G  +   GI        + +             
Sbjct: 293 ARGLNYYTGAIFEVKALDTPMGSITGGGRYDNLTGIFGMPGLSGVGISFGADRIYDVLNA 352

Query: 549 -------WLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
                   ++  Q +          Y        +   +  E       +  ++   + K
Sbjct: 353 LDLYPKEAVNATQVLFINFGEKETAYCLPFVAKARKAGIRTEIFPDKAKMKKQMGYANAK 412

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            IP +++ G+ E +E  + ++   +     +++ + I  ++K
Sbjct: 413 NIPYVVLAGENEINEGKLMLKDMQTGEQTLITIDELIATVSK 454


>gi|302869184|ref|YP_003837821.1| seryl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029]
 gi|315504339|ref|YP_004083226.1| seryl-tRNA synthetase [Micromonospora sp. L5]
 gi|302572043|gb|ADL48245.1| seryl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029]
 gi|315410958|gb|ADU09075.1| seryl-tRNA synthetase [Micromonospora sp. L5]
          Length = 427

 Score = 62.9 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/251 (15%), Positives = 85/251 (33%), Gaps = 16/251 (6%)

Query: 213 NRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDL----FHIAEDGSGVIFW 268
                  +        + +  +       + RDH +L+R + L      +   GSG   +
Sbjct: 106 PNLPAEDVVPGGKEANRVVRTFGEAPAIEKVRDHVELSRALGLVDHERGVKLGGSGFWMY 165

Query: 269 HRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
              G ++   L++++  + I+  YE +  P +L       +G +  +  +++ +    D 
Sbjct: 166 TGLGARLEWALVNWLIEQNIQAGYEFLLPPHLLLDSAGFAAGQFPKFHDDVYHI----DK 221

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVR 384
               R   L P      +  +   +    +LP++   +   YR E +GS     G +R  
Sbjct: 222 QSSSRGQFLLPTAETAILGAYQDEILETPKLPLKAFAYTPCYRREAAGSHSDERGTVRGH 281

Query: 385 GFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV----KLSTRPEKRVGSDAL 440
            F + +   F   EQ       +   +  +    G            ++   K+     +
Sbjct: 282 QFNKVEIFQFTLPEQAGEALEAMVGHVEGLVGKLGLHFQTSLLAAGDASASMKKTLDVEV 341

Query: 441 WDDAENIMKGV 451
           W  +    K V
Sbjct: 342 WMPSTGKYKEV 352


>gi|268590183|ref|ZP_06124404.1| serine--tRNA ligase [Providencia rettgeri DSM 1131]
 gi|291314463|gb|EFE54916.1| serine--tRNA ligase [Providencia rettgeri DSM 1131]
          Length = 430

 Score = 62.9 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 66/188 (35%), Gaps = 10/188 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M     +   Y+E+  P +++      +G    +  ++F  K  ++   D
Sbjct: 170 ARMHRALAQFMLDLHTEQHGYQELYVPYLVNHDTLYGTGQLPKFGEDLFHTKPLEEEA-D 228

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
             T+AL P        +    +     LP+++      +R+E         GL+R+  F 
Sbjct: 229 SSTYALIPTAEVPVTNLVRDEILDEDSLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFD 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E+  +   ++      + +        V L T              +W  
Sbjct: 289 KVELVQIVHPEKSMDALEELTGHAEKVLQLLNLPYRKVILCTGDIGFGSRKTYDLEVWLP 348

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 349 AQNTYREI 356


>gi|254508478|ref|ZP_05120597.1| seryl-tRNA synthetase [Vibrio parahaemolyticus 16]
 gi|219548590|gb|EED25596.1| seryl-tRNA synthetase [Vibrio parahaemolyticus 16]
          Length = 435

 Score = 62.9 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/190 (12%), Positives = 64/190 (33%), Gaps = 11/190 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + +  +M     +   Y E+  P +++      +G    +  ++F  +  ++ + D
Sbjct: 172 ARLHRAIAQFMLDLHTEEHGYSEMYVPYLVNSDSLFGTGQLPKFGKDLFHTEPLEEKVND 231

Query: 331 L--RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRG 385
              R  +L P        +    +    +LP+++      +R+E         GL+R+  
Sbjct: 232 EEPRKLSLIPTAEVPVTNLVRDTISDEADLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQ 291

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALW 441
           F + +       E   +   ++      + +        V L T              +W
Sbjct: 292 FDKVELVQITRPEDSMDALEELTGHAEKVLQLLELPYRKVVLCTGDMGFGARKTYDLEVW 351

Query: 442 DDAENIMKGV 451
             A+   + +
Sbjct: 352 VPAQETYREI 361


>gi|218710534|ref|YP_002418155.1| alanyl-tRNa synthetase [Vibrio splendidus LGP32]
 gi|218323553|emb|CAV19764.1| Alanyl-tRNA synthetase [Vibrio splendidus LGP32]
          Length = 860

 Score = 62.9 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 58/143 (40%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFS 115
             +E     + R+   + HS  H++  A++ +  E     G +++ D   +DF   +  +
Sbjct: 545 DKVEARVDAERRAAISLNHSATHLLHSALREVLGEHVAQKGSLVKPDNLRFDFSNLEAVT 604

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
             ++ ++E+ +   + ++       +  E A+E         K          + V +  
Sbjct: 605 PAQIKEVERLVNAQVRKNHVIETNIMDIESAKEKGAMALFGEKY--------DDEVRVLS 656

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G++  +LC G H  +TG +  F
Sbjct: 657 MGDFSTELCGGIHASNTGDIGLF 679


>gi|149277763|ref|ZP_01883903.1| alanine--tRNA ligase (alanyl-tRNA synthetase) [Pedobacter sp.
           BAL39]
 gi|149231451|gb|EDM36830.1| alanine--tRNA ligase (alanyl-tRNA synthetase) [Pedobacter sp.
           BAL39]
          Length = 900

 Score = 62.9 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/166 (19%), Positives = 72/166 (43%), Gaps = 13/166 (7%)

Query: 44  NGKVCDLSDPVR---EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII 100
           NG +   +D +    +G+   +  ED R L+   H+  H++  A++ +        G ++
Sbjct: 554 NGVIVHYTDTLPEDLDGTFWAVIDEDKRLLSQDNHTATHLLHAALKKVLGTHVNQKGSLV 613

Query: 101 EDGF-YYDFDKEQPFSSDELAQIEKKMQEIIARDSPF-LKQYLSHEKARELFESKKEAYK 158
              +  +DF      S ++LA IE  + + +  + P   ++ + +++A     +     K
Sbjct: 614 NPEYLRFDFSHFAKISEEDLAAIEHLVNQKVRENIPLKEQRDVPYDQAISSGVTALFGEK 673

Query: 159 V-EILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKV 203
             E++  I   ++ +    G       G HV++TGQ+  F  + + 
Sbjct: 674 YGELVRVITFDDHYSKELCG-------GTHVQATGQIGYFKIISES 712


>gi|15673949|ref|NP_268124.1| histidyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
 gi|32130145|sp|Q9CE78|SYH_LACLA RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|12725009|gb|AAK06065.1|AE006426_11 histidyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
 gi|326407504|gb|ADZ64575.1| histidyl-tRNA synthetase [Lactococcus lactis subsp. lactis CV56]
          Length = 430

 Score = 62.9 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 63/422 (14%), Positives = 124/422 (29%), Gaps = 57/422 (13%)

Query: 269 HRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
                  +Q +    R    D +++EI TP       ++         +++   +  D  
Sbjct: 13  LPAETAKWQYIEEIARGVFNDYNFKEIRTPMF---ESYELFSRATGETSDIVTKEMYDFE 69

Query: 328 IKDLRTFALKP--MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRG 385
            K  R  AL+P          + N         PV+L     ++R E   S     R+R 
Sbjct: 70  DKGGRHIALRPEGTASAVRAYIENKLYAPEVVKPVKLWYDAPMFRYERPQS----GRLRQ 125

Query: 386 FTQD------------DAHVFCTKEQMF---------------------NECLKIHNLII 412
           F Q             D  +    + +F                         +     +
Sbjct: 126 FHQFGVECLGVKNPAVDVEIIAMADTLFRQLGITGLKLALNTLGDMESRMAYRQALIDYL 185

Query: 413 SIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV-LDTIKNSSQDRINTGVLLGE 471
           + +++   E    +L+  P + + S    D A        LD +  +S+        L E
Sbjct: 186 TPFENQLSEDSRRRLNENPLRVLDSKEAEDIAIVKNAPAILDYLNEASKAYFEEVKALLE 245

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN---SHSEKCHPVMIHRAVF 528
                   +  +    G D+   TI          +              +        F
Sbjct: 246 ALHIEYTIDPNM--VRGLDYYNDTIFEFIVDFDGKDLTVCGGGRYDGLVEYFDGPATPAF 303

Query: 529 G---SIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD 585
           G    IER + I  +     +P     +   +  +   A   A ++A  L+     +E D
Sbjct: 304 GFGLGIERLLMIAQKQEINFIPE--ETLDVYIAVMGEKANLEATKLAESLREQAFKVERD 361

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR---RFGSTTTQKVSLLDAIPILT 642
           F N  +  + +        +II  G+ E     I ++         T   ++ ++   + 
Sbjct: 362 FSNRKLGAQFKTAEKLGAELIITLGEDEIRTGQIKVKHNQTRKQVETTLKAVHESFAPIF 421

Query: 643 KE 644
           +E
Sbjct: 422 EE 423


>gi|312135147|ref|YP_004002485.1| alanyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
 gi|311775198|gb|ADQ04685.1| alanyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
          Length = 879

 Score = 62.9 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 42/191 (21%), Positives = 78/191 (40%), Gaps = 10/191 (5%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFS 115
            S+     ED R   +  H+  H++  A++ I  +     G  +  D   +DF   +P S
Sbjct: 544 SSVVAKVDEDLRFATMKNHTATHLLHSALRKILGQHAQQSGSQVSPDRLRFDFAHYEPLS 603

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            +++ +IEK +  +I +  P  K     + A  +        K   L        V + +
Sbjct: 604 EEQIIEIEKMVNNVIQQAIPVEKIVTDLDSALRMGAIALFDEKYSNL--------VRVIK 655

Query: 176 QGEW-FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
             ++  +LC G HV +TGQ+  F  + + + A           +++Y    NTQQ L Q 
Sbjct: 656 IDDFSMELCGGTHVDNTGQIGMFKIISESSVAAGVRRIEAITGNKVYEFILNTQQTLKQL 715

Query: 235 LYFLEESEKRD 245
              ++ S   +
Sbjct: 716 RSKVKASTDSE 726


>gi|288559908|ref|YP_003423394.1| glycyl-tRNA synthetase GlyS [Methanobrevibacter ruminantium M1]
 gi|288542618|gb|ADC46502.1| glycyl-tRNA synthetase GlyS [Methanobrevibacter ruminantium M1]
          Length = 570

 Score = 62.9 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 55/177 (31%), Gaps = 16/177 (9%)

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSR--FNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
            E   K      +     Q    L     F         E+  P +I    FG       
Sbjct: 391 IELKEKIESKGKFTLELDQSFEILKEHLLFEDIEEEVKGERIIPHVIE-PSFGIDRILYC 449

Query: 537 IMIENFKG----------NLPLWLSPIQAIV--TTITSSAVEYAQEIANLLKSHHLSIET 584
            ++ +FK                ++PIQ  V          E A EI + L+    +++ 
Sbjct: 450 TLLHSFKTEEDGFDKEYFKFANEIAPIQVSVFPLMNRDGLGEIATEITHNLREAGFTVDN 509

Query: 585 DFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           D    TI  +        +PI I        + ++ +R   +   ++V + D   ++
Sbjct: 510 DTSG-TIGKRYARADEVGVPIAITVDYDTKEDDTVTVRNRDTEEQERVKIEDLKEVI 565



 Score = 45.5 bits (106), Expect = 0.029,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 2/71 (2%)

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRE-LPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
            K  +   ++P    G   +F    + ++  LP    + G  YRNE S    G++R+R F
Sbjct: 150 AKGDKVGYMRPETAQGIFILFKRLSRFFKNKLPFGAVQLGKAYRNEISPR-QGVIRLREF 208

Query: 387 TQDDAHVFCTK 397
           TQ +A +F   
Sbjct: 209 TQAEAEIFLDP 219



 Score = 41.7 bits (96), Expect = 0.39,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 32/76 (42%), Gaps = 2/76 (2%)

Query: 256 FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK--DDYEEINTPQVLDQHLWQQSGHWDS 313
           F I    SG   +   G  +   ++   R++    + + EI  P V+ + + + SGH D+
Sbjct: 20  FEIYSGVSGFTDYGPLGASLKNNIMQKWRKQYIAGEGFHEIEGPTVMPKEVLKASGHVDN 79

Query: 314 YRANMFAVKCADDTIK 329
           +   M   K   +  +
Sbjct: 80  FTDPMTKCKDCGEVFR 95


>gi|163749985|ref|ZP_02157229.1| alanyl-tRNA synthetase [Shewanella benthica KT99]
 gi|161330259|gb|EDQ01240.1| alanyl-tRNA synthetase [Shewanella benthica KT99]
          Length = 874

 Score = 62.9 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 55/142 (38%), Gaps = 10/142 (7%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSS 116
           S+E    +  R    + HS  H++  A++ +        G +++     +DF   +    
Sbjct: 545 SLEASVDKSLRQRTELNHSVTHLLHAALRQLLGTHVSQKGSLVDPERLRFDFSHFEGVKP 604

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
           +EL  +E  +   I  +     Q ++ + A+E         K          + V +   
Sbjct: 605 EELQAVEDLVNSQIRHNHELTAQVMTIDAAKEQGAMALFGEKY--------ADEVRVVTM 656

Query: 177 GEW-FDLCRGPHVRSTGQVKKF 197
           G++  +LC G HV  TG +  F
Sbjct: 657 GDFSIELCGGTHVGRTGDIGLF 678


>gi|39935910|ref|NP_948186.1| seryl-tRNA synthetase [Rhodopseudomonas palustris CGA009]
 gi|192291558|ref|YP_001992163.1| seryl-tRNA synthetase [Rhodopseudomonas palustris TIE-1]
 gi|67461786|sp|Q6N5X5|SYS_RHOPA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|229890230|sp|B3Q6H9|SYS_RHOPT RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|39649764|emb|CAE28286.1| seryl-tRNA synthetase [Rhodopseudomonas palustris CGA009]
 gi|192285307|gb|ACF01688.1| seryl-tRNA synthetase [Rhodopseudomonas palustris TIE-1]
          Length = 434

 Score = 62.9 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 63/183 (34%), Gaps = 13/183 (7%)

Query: 269 HRKG-WKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD 325
            +KG  ++ + +  +          Y E+N P ++       +     +R + FA   A 
Sbjct: 167 LKKGLARLERAIGQFFLDVHTGDHGYTEVNPPLLVKDDAMFGTAQLPKFREDQFA---AG 223

Query: 326 DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMR 382
                   + L P        +    +   +ELP+RL      +R E   +     G++R
Sbjct: 224 AIGSGGEGYWLIPTAEVSLTNLVRESILDEKELPMRLTALTPCFRAEAGAAGRDTRGMIR 283

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSD 438
              FT+ +     T EQ  +E  ++ +    + +  G    ++ L T             
Sbjct: 284 QHQFTKVELVSITTPEQSKDEHERMLSCAEEVLRRLGLHYRVMTLCTGDMGFASQKTYDI 343

Query: 439 ALW 441
            +W
Sbjct: 344 EVW 346


>gi|332140622|ref|YP_004426360.1| alanyl-tRNA synthetase [Alteromonas macleodii str. 'Deep ecotype']
 gi|327550644|gb|AEA97362.1| alanyl-tRNA synthetase [Alteromonas macleodii str. 'Deep ecotype']
          Length = 865

 Score = 62.9 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/144 (20%), Positives = 61/144 (42%), Gaps = 11/144 (7%)

Query: 56  EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPF 114
           + +   I   +  ++    HS  H++  A++ I  E     G ++E     +DF   +  
Sbjct: 536 DTATAAIDSANREAIK-KNHSATHLLHAALREILGEHVTQKGSLVEAPRMRFDFSHFEAV 594

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
           ++++LA+IE+++ + I  +     + +  E+A+          K          E V + 
Sbjct: 595 TTEQLAEIERRVNQEIRANHSLATELMDLEEAKASGAMALFGEKY--------DEKVRVV 646

Query: 175 RQGEW-FDLCRGPHVRSTGQVKKF 197
             G +  +LC G HV  TG +  F
Sbjct: 647 TMGPFSVELCGGTHVARTGDIGLF 670


>gi|29840653|ref|NP_829759.1| seryl-tRNA synthetase [Chlamydophila caviae GPIC]
 gi|33301682|sp|Q821P2|SYS_CHLCV RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|29835003|gb|AAP05637.1| seryl-tRNA synthetase [Chlamydophila caviae GPIC]
          Length = 426

 Score = 62.9 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 51/348 (14%), Positives = 107/348 (30%), Gaps = 54/348 (15%)

Query: 209 RGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFW 268
             D +   + +  G           ++   ++ +  D +  A+       A    GV+  
Sbjct: 114 CPDKSGNQVIKSVGALPTFSFTPKHHVELNQKLQILDFKLPAKTSGSGWPAYKNQGVM-- 171

Query: 269 HRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTI 328
               W +   L++  R      ++    P ++ + +   SG    +    + V+  D   
Sbjct: 172 --LEWALLTYLLNKQREH---GFQLWLPPLLVKREILFGSGQIPKFDGQYYCVEDGD--- 223

Query: 329 KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRG 385
              ++  L P          +  + + ++LP+  A     +R E   +     GL+RV  
Sbjct: 224 ---QSLYLIPTAEVVLNGFHSQEIFNEKDLPIYYAACTPCFRREAGAAGANERGLVRVHQ 280

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
           F + +   F T EQ      K+  ++  I  +      +  LST       S  +  DAE
Sbjct: 281 FNKVEMFAFTTPEQADQAYEKMLAVVEDILTELKLPYRLSLLSTGDMSFTASKTI--DAE 338

Query: 446 NIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSR 505
             +                     G+ ++Y                     Q       R
Sbjct: 339 VWL--------------------PGQQSYY---------------EVSSISQCTDFQSRR 363

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI 553
               Y +S  +      ++ +   +   F+ I+ EN +      + P 
Sbjct: 364 SETRYKDSQGKMHFIHTLNGSGLATPRLFVAIL-ENNQQKDGSVVIPE 410


>gi|68171802|ref|ZP_00545142.1| Histidyl-tRNA synthetase, class IIa [Ehrlichia chaffeensis str.
           Sapulpa]
 gi|88658069|ref|YP_507112.1| histidyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas]
 gi|123736410|sp|Q2GHH1|SYH_EHRCR RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|67998775|gb|EAM85487.1| Histidyl-tRNA synthetase, class IIa [Ehrlichia chaffeensis str.
           Sapulpa]
 gi|88599526|gb|ABD44995.1| histidyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas]
          Length = 413

 Score = 62.9 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 59/395 (14%), Positives = 142/395 (35%), Gaps = 56/395 (14%)

Query: 287 IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKP--MNCPGH 344
            +  +  ++TP +    ++ ++       +++   +  +   K      L+P   +    
Sbjct: 35  HRYGFIAVDTPIIEFTEVFTKT---LGDDSDIVMKEMYNFQDKSGENITLRPEFTSAIVR 91

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTK------E 398
           V +  + +      PV+L   G V+R E         R R F Q +   F +       E
Sbjct: 92  VLINKNLII-----PVKLFSSGPVFRYERPQKC----RQRQFHQVNFEFFGSDLPLADIE 142

Query: 399 QMFNEC-----LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGS---DALWDDAENIMKG 450
            +         LK+ + I       G ++ M        + +     D   D    ++  
Sbjct: 143 MIALGYHILDELKLLDDITLEINFLGDKETMNSYKLSLIEYLNKYKKDLSEDSQRRLITN 202

Query: 451 VLDTIKNSSQDRINTGVLLGEGAFYGPK--FEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
            L  + + + +     + +   +++  K   ++  +   G D  C   +V+ ++    + 
Sbjct: 203 PLRILDSKAPEDREILLNVPNISYFYSKSSNDFFAEVLYGLDELCIPYKVNHSIVRGLD- 261

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL-----------------S 551
           +Y N+  E     +  +    +  R+ G++      + P                     
Sbjct: 262 YYCNTVFEFTTSKLGAQNAVVAGGRYDGLVKSMGGNDTPAVGFAMGVERVSALIDYKHQE 321

Query: 552 PIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI---PIIII 608
           P   ++  I   AV YA ++A  L+ + +S+  +++N  +    R   ++K+    I++I
Sbjct: 322 PRSVVLIPIGKDAVSYALKLAYELRCNGISVNWNYKNANL----RNA-LRKVGDDNIVLI 376

Query: 609 CGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            GD+E    +I ++   +   Q++   D +  L  
Sbjct: 377 FGDEELKNNTIQVKDMKTGEQQEIVRCDLLDTLCN 411


>gi|323495032|ref|ZP_08100121.1| seryl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
 gi|323310689|gb|EGA63864.1| seryl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
          Length = 435

 Score = 62.9 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/190 (12%), Positives = 64/190 (33%), Gaps = 11/190 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + +  +M     +   Y E+  P +++      +G    +  ++F  +  ++ + D
Sbjct: 172 ARLHRAIAQFMLDLHTEEHGYTEMYVPYLVNSDSLFGTGQLPKFGKDLFHTEPLEEKVND 231

Query: 331 L--RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRG 385
              R  +L P        +    +    +LP+++      +R+E         GL+R+  
Sbjct: 232 EEPRKLSLIPTAEVPVTNMVRDTISDEADLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQ 291

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALW 441
           F + +       E   +   ++      + +        V L T              +W
Sbjct: 292 FDKVELVQITKPEDSMDALEELTGHAEKVLQLLELPYRKVVLCTGDMGFGARKTYDLEVW 351

Query: 442 DDAENIMKGV 451
             A+   + +
Sbjct: 352 VPAQETYREI 361


>gi|309775356|ref|ZP_07670361.1| alanine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
 gi|308916873|gb|EFP62608.1| alanine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
          Length = 875

 Score = 62.9 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 57/138 (41%), Gaps = 10/138 (7%)

Query: 56  EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGF-YYDFDKEQPF 114
           + ++ +   E  R +    HSC H++  A++ +        G  + + +  +DF   +  
Sbjct: 546 QDTVTLQVDERKRDIITSNHSCTHLLQSALKQVVGTHIQQAGSFVSEEYLRFDFTHYEKV 605

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
           + ++L +IE+ + + I+      K  +  E+A++             L      + V + 
Sbjct: 606 NEEQLKKIEQLVNQYISAHYTVSKVEMPIEEAKK--------SGATALFDEKYGDVVRVV 657

Query: 175 RQGE-WFDLCRGPHVRST 191
             G+   + C G HV +T
Sbjct: 658 TMGDVSKEFCGGCHVNNT 675


>gi|299131739|ref|ZP_07024934.1| alanyl-tRNA synthetase [Afipia sp. 1NLS2]
 gi|298591876|gb|EFI52076.1| alanyl-tRNA synthetase [Afipia sp. 1NLS2]
          Length = 888

 Score = 62.9 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/142 (21%), Positives = 59/142 (41%), Gaps = 2/142 (1%)

Query: 53  PVREGS-IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDK 110
            +++G+ +++      R      HS  H++ EA++ +  +     G ++      +DF  
Sbjct: 542 TLKKGAPLQLEVDHARRGAIRANHSATHLLHEALRQVLGDHIAQRGSLVSPERLRFDFAH 601

Query: 111 EQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN 170
            +P + DEL++IE    +I+  +     + +  E AR          K      + +   
Sbjct: 602 TKPITPDELSRIEDIANDIVLENGEVTTRLMGIEDARSSGARALFGEKYGDEVRVVSMGQ 661

Query: 171 VTLYRQGEWFDLCRGPHVRSTG 192
            +    G   +LC G HVR TG
Sbjct: 662 GSGNALGWSVELCGGTHVRRTG 683


>gi|297538756|ref|YP_003674525.1| seryl-tRNA synthetase [Methylotenera sp. 301]
 gi|297258103|gb|ADI29948.1| seryl-tRNA synthetase [Methylotenera sp. 301]
          Length = 426

 Score = 62.9 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/222 (17%), Positives = 78/222 (35%), Gaps = 18/222 (8%)

Query: 242 EKRDHRKLAREMDL-FHIAEDGSGVIFWHRKG--WKIFQTLISYM--RRKIKDDYEEINT 296
           E +DH  +   + L F      SG  F   +G   K+ + L  +M   +  +  YEE  T
Sbjct: 135 EVKDHADVGTPLGLDFDTGTKLSGTRFTLMRGQIAKMHRALAQFMLNTQTEQHGYEECYT 194

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +++      +G    +  ++F+++  D          L P +           +    
Sbjct: 195 PYLVNAETLTGTGQLPKFEEDLFSLQHNDSK------LYLIPTSEVTLTNTVRDEIVPLE 248

Query: 357 ELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
            LP++L      +R+E         G++R   F + +       +  +    ++     +
Sbjct: 249 SLPIKLTAHTPCFRSEAGSYGRDTKGMIRQHQFDKVEMVQIVHPDTSYAALEEMVGHAEN 308

Query: 414 IYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
           I K  G    +V L T              +W  A+N  + +
Sbjct: 309 ILKALGLPYRVVSLCTGDMGFGAAKTYDLEVWLPAQNTYREI 350


>gi|322832176|ref|YP_004212203.1| seryl-tRNA synthetase [Rahnella sp. Y9602]
 gi|321167377|gb|ADW73076.1| seryl-tRNA synthetase [Rahnella sp. Y9602]
          Length = 430

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 62/188 (32%), Gaps = 10/188 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M     +   Y E   P +++Q     +G    +  ++F  K  D+    
Sbjct: 170 ARMHRALSQFMLDLHTEQHGYLETYVPYLVNQETLYGTGQLPKFGEDLFHTKPLDEEAG- 228

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
              +AL P        +    +     LP+++      +R+E         GL+R+  F 
Sbjct: 229 SSNYALIPTAEVPLTNLTRDEILEEESLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFD 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E   +   ++      + +        V L T              +W  
Sbjct: 289 KVEMVQIVRPEDSMDALEELTGHAEKVLQLLNLPYRKVLLCTGDMGFGSCKTYDLEVWLP 348

Query: 444 AENIMKGV 451
           A++  + +
Sbjct: 349 AQDTYREI 356


>gi|319892684|ref|YP_004149559.1| Histidyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03]
 gi|317162380|gb|ADV05923.1| Histidyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03]
          Length = 423

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 65/421 (15%), Positives = 141/421 (33%), Gaps = 72/421 (17%)

Query: 269 HRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQS--GHWDSYRANMFAVKCAD 325
             +    ++ + + + + ++  +Y+EI TP      L+ +      D  +  M+  K   
Sbjct: 12  LPEETTKWRYIENQLHKLMEVYNYQEIRTPIFESTDLFARGVGDSTDVVQKEMYTFKDKG 71

Query: 326 DTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL----PVRLAEFGSVYRNEPSGSLHGLM 381
           D     R+  L+P    G  AV    +++  +     PV+L   G ++R E         
Sbjct: 72  D-----RSITLRP---EGTAAVVRSYIENKMQGLPNQPVKLYYNGPMFRYERKQK----G 119

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALW 441
           R R F Q        +    +   ++  +++ IY+ FG      K        VG     
Sbjct: 120 RYRQFNQFGVEAIGAENPSMDA--EVLAMVMHIYQSFGL-----KKLKLVINSVGDAESR 172

Query: 442 DDAENIMKG-----------------------VLDTIKNSSQDRINTGVLLGEGAFYGPK 478
            D +N ++                        +LD   +  Q  I T   + +      K
Sbjct: 173 VDYQNALREHFQPVIHNYCKDCQQRIKTNPMRILDCKVDRHQPEIQTAPSITDFLNDYSK 232

Query: 479 FEYILK----DAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
             +       D +G  ++     V         AF +   +E     +      G     
Sbjct: 233 DYFEAVKSHLDRLGMPYEVDPKLVRGLDYYTHTAFELMMDNEAYDGAITTLCGGGRYNGL 292

Query: 535 IGIMIENFKGNLPLWLS----------------PIQAI---VTTITSSAVEYAQEIANLL 575
           + ++    +  +   LS                 +Q I   V T+   A ++A  + N L
Sbjct: 293 LELLDGPSETGIGFALSIERLLLALEEEGIEFPQMQHIDLFVATMGEKADDFAVTLLNRL 352

Query: 576 KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
           +   +S++ D+ +  +  ++++         I+ GD+E     + ++   +  +Q +   
Sbjct: 353 RHAGISVDKDYLSRKLKGQMKQADRLNATYTIVIGDQELEAGEVAVKHMATGESQTMKFE 412

Query: 636 D 636
           +
Sbjct: 413 E 413


>gi|262305769|gb|ACY45477.1| glu- + pro-tRNA synthetase [Nicoletia meinerti]
          Length = 134

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 50/133 (37%), Gaps = 18/133 (13%)

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           G  Y    E     A GR  Q GT   +  N    F   Y +  + +     +++  +G 
Sbjct: 1   GGDYTTTVE-AFVSASGRGIQGGTSHHLGQNFSKMFEIVYDDPETHEKR--YVYQNSWGL 57

Query: 531 IERFIGIMIENFKGNLPLWLSP----IQAIVTT----ITSSAVEY------AQEIANLLK 576
             R IG+MI     N  L L P    +Q ++      + +S  +        +++   L 
Sbjct: 58  TTRTIGVMIMVHADNQGLVLPPRVASVQVVIVPCGITVNTSDADRKMLVTSCEKLEKQLL 117

Query: 577 SHHLSIETDFRNE 589
              + ++ D+R+ 
Sbjct: 118 DAGVRVKGDYRDN 130


>gi|225016772|ref|ZP_03705964.1| hypothetical protein CLOSTMETH_00684 [Clostridium methylpentosum
           DSM 5476]
 gi|224950440|gb|EEG31649.1| hypothetical protein CLOSTMETH_00684 [Clostridium methylpentosum
           DSM 5476]
          Length = 425

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 50/355 (14%), Positives = 125/355 (35%), Gaps = 35/355 (9%)

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +   ++K M++        + + L  ++ R    ++K+A K E  ++  +K+   L ++ 
Sbjct: 10  DAEMVKKAMRDRNKNMDETIDEILEIDRERREISTQKDAMKAE--QNKVSKQIPILKKEN 67

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLS---------RIYGTAWNTQ 228
              +      + +  ++    K +    +         +L           I  +  + Q
Sbjct: 68  GNVEEV----MENMKKLSDEIKELNAKTSELEAKQKDLLLRIPNIPHPSVPIGKSEDDNQ 123

Query: 229 QELTQYLYFLEESEKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLIS-YM 283
           +          + E + H  L +++ +          G+   F+   G ++ + +I+ Y+
Sbjct: 124 EIRKFGTPTTFDFEPKAHWDLGKDLGILDPDTAAKVTGARFHFYKGAGARLERAVINFYL 183

Query: 284 RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPG 343
               K+ Y E+  P ++++     +G    +  + F +   D        + L P     
Sbjct: 184 DTHTKNGYTEVFPPFMVNRASMTGTGQLPKFEEDAFRLANMD--------YFLIPTAEVP 235

Query: 344 HVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQM 400
              ++   +    ++PV+   + + +R E   +     GL+R   F + +   F   E  
Sbjct: 236 VTNMYRDEIIDGDKIPVKFCAYSACFRAEAGSAGRDTRGLIRQHQFNKVELVKFADPENS 295

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
           + E  K+      + +       +V LST              +W  + N  K +
Sbjct: 296 YEELEKLTADAERVLQLLELPYRVVCLSTGDLGFSSAKTYDIEVWLPSYNNYKEI 350


>gi|148992030|ref|ZP_01821804.1| histidyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
 gi|149011982|ref|ZP_01833130.1| histidyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
 gi|149020031|ref|ZP_01835005.1| histidyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
 gi|168489187|ref|ZP_02713386.1| histidyl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|147763937|gb|EDK70870.1| histidyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
 gi|147929079|gb|EDK80090.1| histidyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
 gi|147930709|gb|EDK81690.1| histidyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
 gi|183572296|gb|EDT92824.1| histidyl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|332071558|gb|EGI82051.1| histidyl-tRNA synthetase [Streptococcus pneumoniae GA17570]
          Length = 429

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 60/404 (14%), Positives = 126/404 (31%), Gaps = 56/404 (13%)

Query: 276 FQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           +Q +  + R   K  +Y E+ TP       ++          ++   +  D   K  R  
Sbjct: 20  WQYVEGFAREIFKRYNYAEVRTPIF---EHYEVISRSVGDTTDIVTKEMYDFYDKGDRHI 76

Query: 335 ALKPMNCPGHVAVFNHGLKS-----YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
            L+P    G   V    +++       + P +    G ++R E   +     R+R F Q 
Sbjct: 77  TLRP---EGTAPVVRSYVENKLFAPEVQKPSKFYYMGPMFRYERPQA----GRLRQFHQI 129

Query: 390 DAHVFCTKEQM-FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWD------ 442
               F +       E + +    +      G +  +  L     +     AL D      
Sbjct: 130 GVECFGSSNPATDVETIVMAAHFLKEIGIQGVKLHLNTLGNPESRAAYRQALIDYLTPLK 189

Query: 443 -----DAENIMKG----VLDTIKNSSQDR-------INTGVLLGEGAFYGPK-------F 479
                D++  ++     VLD+ +   +         ++      +  F   +        
Sbjct: 190 ETLSKDSQRRLEENPLRVLDSKEKEDKVAVENAPSILDFLDEESQAHFDAVRQMLENLGV 249

Query: 480 EYILKDAI--GRDWQCGTIQVDFNLPSRFNAFYVN---SHSEKCHPVMIHRAVFG---SI 531
           +YI+   +  G D+   TI          +              +      A FG    +
Sbjct: 250 DYIIDTNMVRGLDYYNHTIFEFITEIEGNDLTVCAGGRYDGLVAYFGGPETAGFGFGLGV 309

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           ER + I+    +G      + +   +  +   A   A E+   L+      E D+ N  +
Sbjct: 310 ERLLLIL--EKQGVALPIENALDVYIAVLGDGANVKALELVQALRQQGFKAERDYLNRKL 367

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
             + +   +     +I  G+ E     + ++   +    +VSL 
Sbjct: 368 KAQFKSADVFATKTLITLGESEVESGQVTVKNNQTREEVQVSLE 411


>gi|253990316|ref|YP_003041672.1| seryl-tRNA synthetase [Photorhabdus asymbiotica subsp. asymbiotica
           ATCC 43949]
 gi|253781766|emb|CAQ84929.1| seryl-tRNA synthetase [Photorhabdus asymbiotica]
          Length = 429

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 63/188 (33%), Gaps = 11/188 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M     +   Y E   P +++      +G    +  ++F  K  ++    
Sbjct: 170 ARLHRALAQFMLNLHTEQHGYLETYVPYLVNHDTLYGTGQLPKFGEDLFHTKPLEEET-- 227

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
              +AL P        +    +    ELP+R+      +R+E         GL+R+  F 
Sbjct: 228 GSHYALIPTAEVPVTNLVRDEILDESELPLRMTAHTPCFRSEAGSYGRDTRGLIRMHQFD 287

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E+  N   ++      + +        V L T              +W  
Sbjct: 288 KVELVQIVHPEESMNALEELTGHAEKVLQLLNLPYRKVLLCTGDMGFGACKTYDLEVWLP 347

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 348 AQNAYREI 355


>gi|240122334|ref|ZP_04735290.1| alanyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|268680920|ref|ZP_06147782.1| alanyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|268621204|gb|EEZ53604.1| alanyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
          Length = 874

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 61/143 (42%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFS 115
            SI     ++ R+  +  HS  H+M +A++ +        G  +  +   +D    Q  +
Sbjct: 544 DSITAKVDDEIRNANMRNHSATHLMHKALRDVLGGHVEQKGSLVTAESTRFDISHPQAVT 603

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           ++E+A++E+++ E I  +       +S E A++         K          + V + +
Sbjct: 604 AEEIAEVERRVNEAILANVAVNAAIMSMEDAQKTDAMMLFGEKY--------GDEVRVLQ 655

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G +  +LC G HV  TG +  F
Sbjct: 656 MGGFSTELCGGTHVSRTGDIGLF 678


>gi|242280836|ref|YP_002992965.1| seryl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
 gi|259511664|sp|C6BS43|SYS_DESAD RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|242123730|gb|ACS81426.1| seryl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
          Length = 425

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/189 (14%), Positives = 65/189 (34%), Gaps = 17/189 (8%)

Query: 272 GWKIFQTLISYMRRK--IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
           G ++ + L S+M     +   Y E+  P ++++     +G    +  ++F +K       
Sbjct: 169 GARLERALTSFMVDVQTMDHGYTEVIPPYIVNRDSLFGTGQLPKFEEDLFKLKNW----- 223

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGF 386
               + + P        +    + S  +L +        +R+E         GL+R   F
Sbjct: 224 ---EYYMIPTAEVPLTNLHRDEVLSEDDLSIAYCAPTPCFRSEAGSYGKDTKGLIRQHQF 280

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWD 442
            + +   F   ++ F +  K+      I K  G    ++ L T              +W 
Sbjct: 281 HKVEMVRFAHPDKSFEDLEKMTGHAEEILKRLGLHYRVITLCTGDMGFGSAKTYDIEVWL 340

Query: 443 DAENIMKGV 451
             ++  + +
Sbjct: 341 PGQDKYREI 349


>gi|167629917|ref|YP_001680416.1| histidyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
 gi|229558684|sp|B0TF88|SYH_HELMI RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|167592657|gb|ABZ84405.1| histidyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
          Length = 425

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 38/85 (44%)

Query: 557 VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASE 616
           +          A  +A  L+   +++E D+   ++  +++     ++P ++I G+ E  E
Sbjct: 332 IALAGEGTQPVAFGLAQKLRQRGVAVEMDYLERSLKAQMKTADRFRVPYVVIVGEGELKE 391

Query: 617 RSIGIRRFGSTTTQKVSLLDAIPIL 641
             + +R   +   Q++ L +A   L
Sbjct: 392 GKLTLRTMATGEQQQIPLGEAAEYL 416


>gi|323498308|ref|ZP_08103310.1| seryl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
 gi|323316736|gb|EGA69745.1| seryl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
          Length = 435

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/190 (13%), Positives = 65/190 (34%), Gaps = 11/190 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + +  +M     D   Y E+  P +++      +G    +  ++F  +  ++ + D
Sbjct: 172 ARLHRAIAQFMLDLHTDEHGYTEMYVPYLVNSDSLFGTGQLPKFGKDLFHTEPLEEKVND 231

Query: 331 L--RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRG 385
              R  +L P        +    +    +LP+++      +R+E         GL+R+  
Sbjct: 232 EEPRKLSLIPTAEVPVTNMVRDTISDEADLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQ 291

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALW 441
           F + +       E+  N   ++      + +        V L T              +W
Sbjct: 292 FDKVELVQITKPEESMNALEELTGHAEKVLQLLELPYRKVVLCTGDMGFGARKTYDLEVW 351

Query: 442 DDAENIMKGV 451
             A+   + +
Sbjct: 352 VPAQETYREI 361


>gi|322376011|ref|ZP_08050521.1| histidine--tRNA ligase [Streptococcus sp. C300]
 gi|321278961|gb|EFX56004.1| histidine--tRNA ligase [Streptococcus sp. C300]
          Length = 426

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 64/409 (15%), Positives = 129/409 (31%), Gaps = 57/409 (13%)

Query: 276 FQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           +Q +  + R   K  +Y E+ TP       ++          ++   +  D   K  R  
Sbjct: 20  WQYVEGFAREIFKRYNYAEVRTPIF---EHYEVISRSVGDTTDIVTKEMYDFYDKGDRHI 76

Query: 335 ALKPMNCPGHVAVFNHGLKS-----YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
            L+P    G   V    +++       + P +    G ++R E   +     R+R F Q 
Sbjct: 77  TLRP---EGTAPVVRSYVENKLFAPEVQKPSKFYYMGPMFRYERPQA----GRLRQFHQI 129

Query: 390 DAHVFCTKEQM-FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWD------ 442
               F +       E + +    +      G +  +  L     +     AL D      
Sbjct: 130 GVECFGSSNPATDVETIAMAAHFLKEIGIQGVKLHLNTLGNPESRAAYRQALIDYLTPLK 189

Query: 443 -----DAENIMKG----VLDTIKNSSQDR-------INTGVLLGEGAFYGPK-------F 479
                D++  ++     VLD+ +   +         ++      +  F   +        
Sbjct: 190 ETLSKDSQRRLEENPLRVLDSKEKEDKVAVENAPSILDFLDEESQAHFDAVRQMLENLGV 249

Query: 480 EYILKDAI--GRDWQCGTIQVDFNLPSRFNAFYVN---SHSEKCHPVMIHRAVFG---SI 531
           +YI+   +  G D+   TI          +              +      A FG    +
Sbjct: 250 DYIIDTNMVRGLDYYNHTIFEFITEIEGNDLTVCAGGRYDGLVAYFGGPETAGFGFGLGV 309

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           ER + I+    +G      + +   +  +   A   A E+   L+      E D+ N  +
Sbjct: 310 ERLLLIL--EKQGVALPIENALDVYIAVLGEGANVKALELVQTLRQQGFKAERDYLNRKL 367

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
             + +   I     +I  G+ E     + ++   +    +VSL DAI  
Sbjct: 368 KAQFKSADIFAAKTLITLGESEVESGQVTVKNNQTREEVQVSL-DAISQ 415


>gi|306826279|ref|ZP_07459613.1| histidine--tRNA ligase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|304431555|gb|EFM34537.1| histidine--tRNA ligase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
          Length = 426

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 59/404 (14%), Positives = 126/404 (31%), Gaps = 56/404 (13%)

Query: 276 FQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           +Q +  + R   K  +Y E+ TP       ++          ++   +  D   K  R  
Sbjct: 20  WQYVEGFAREIFKRYNYAEVRTPIF---EHYEVVSRSVGDTTDIVTKEMYDFYDKGDRHI 76

Query: 335 ALKPMNCPGHVAVFNHGLKS-----YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
            L+P    G   V    +++       + P +    G ++R E   +     R+R F Q 
Sbjct: 77  TLRP---EGTAPVVRSYVENKLFAPEVQKPSKFYYMGPMFRYERPQA----GRLRQFHQI 129

Query: 390 DAHVFCTKEQM-FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWD------ 442
               F +       E + +    +      G +  +  L     +     AL D      
Sbjct: 130 GVECFGSSNPATDVETIAMAAHFLKEIGIQGVKLHLNTLGNPESRAAYRQALIDYLTPLK 189

Query: 443 -----DAENIMKG----VLDTIKNSSQDR-------INTGVLLGEGAFYGPK-------F 479
                D++  ++     VLD+ +   +         ++      +  F   +        
Sbjct: 190 ETLSKDSQRRLEENPLRVLDSKEKEDKVAVENAPSILDFLDAESQAHFDAVRQMLENLGV 249

Query: 480 EYILKDAI--GRDWQCGTIQVDFNLPSRFNAFYVN---SHSEKCHPVMIHRAVFG---SI 531
           +YI+   +  G D+   TI          +              +      A FG    +
Sbjct: 250 DYIIDTNMVRGLDYYNHTIFEFITEIEGNDLTVCAGGRYDGLVAYFGGPETAGFGFGLGV 309

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           ER + I+    +G      + +   +  +   A   A E+   L+      E D+ N  +
Sbjct: 310 ERLLLIL--EKQGVALPIENALDVYIAVLGEEANVKALELVQALRQQGFKAERDYLNRKL 367

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
             + +   +     +I  G+ E     + ++   +    +V+L 
Sbjct: 368 KAQFKSADVFAAKTLITLGESEVESGQVTVKNNQTREEVEVTLD 411


>gi|49475765|ref|YP_033806.1| alanyl-tRNA synthetase [Bartonella henselae str. Houston-1]
 gi|59798532|sp|Q6G2Z4|SYA_BARHE RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|49238572|emb|CAF27813.1| Alanyl-tRNA synthetase [Bartonella henselae str. Houston-1]
          Length = 887

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/174 (22%), Positives = 72/174 (41%), Gaps = 6/174 (3%)

Query: 36  KKAVAVAIN-GKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           KKA  V I+ G+V      + E  +E+      R    + HS  H++ EA++ +      
Sbjct: 525 KKADGVFIHIGEVKSGQARMSEC-VELTVDGVRRKKIRVNHSATHLLHEALRQVLGSHVT 583

Query: 95  AIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKAREL--FE 151
             G ++  D   +DF   +  S +EL +IE    EI+ ++S    + +  + A       
Sbjct: 584 QKGSLVSPDRLRFDFSHPKSVSLEELEKIEDLANEIVLQNSEVTTRLMLVDDAISEGAMA 643

Query: 152 SKKEAYKVEI-LESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVA 204
              E Y  E+ + S+  +      +     +LC G HV  TG +     + + +
Sbjct: 644 LFGEKYGDEVRVVSMGNRLEKGKLKSRWSIELCGGTHVERTGDIGLIHIVSESS 697


>gi|239996387|ref|ZP_04716911.1| alanyl-tRNA synthetase [Alteromonas macleodii ATCC 27126]
          Length = 865

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 55/126 (43%), Gaps = 10/126 (7%)

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIAR 132
            HS  H++  A++ I  E     G ++E     +DF   +  ++++LA+IE+++ + I  
Sbjct: 553 NHSATHLLHAALREILGEHVTQKGSLVEAPRMRFDFSHFEAVTAEQLAEIERRVNQEIRA 612

Query: 133 DSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRST 191
           +     + +  ++A+          K          E V +   G +  +LC G HV  T
Sbjct: 613 NHTLATELMDLDEAKASGAMALFGEKY--------DEKVRVVTMGPFSVELCGGTHVTRT 664

Query: 192 GQVKKF 197
           G +  F
Sbjct: 665 GDIGLF 670


>gi|257052564|ref|YP_003130397.1| glycyl-tRNA synthetase [Halorhabdus utahensis DSM 12940]
 gi|256691327|gb|ACV11664.1| glycyl-tRNA synthetase [Halorhabdus utahensis DSM 12940]
          Length = 586

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 40/109 (36%), Gaps = 6/109 (5%)

Query: 540 ENFKGNLPLWLSPIQAIVTTITSS--AVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           E     LP  ++P    V  +       E A+EIA  L++  L++  D     I  + R 
Sbjct: 471 ERTYLELPPAVAPTTVGVFPLMDKDGLGERAREIAAELRADGLAVAYDDSGA-IGRRYRR 529

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA---IPILTK 643
                 P  +        + ++ IR   ST   +V+  D    I  L +
Sbjct: 530 QDEVGTPYCVTVDYDTLEDGTVTIRDRDSTDQTRVAADDLASTIEALVE 578



 Score = 44.8 bits (104), Expect = 0.042,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 2/82 (2%)

Query: 335 ALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
            L+P    G    F    + +  +LP  + + G  YRNE S     L+RVR FTQ +  +
Sbjct: 164 YLRPETAQGIFIEFPQFAEYARNQLPFGVTQIGRAYRNEISPR-KSLLRVREFTQAELEL 222

Query: 394 FCTKEQMFNECLKIHNLIISIY 415
           F   E+   +   + ++    Y
Sbjct: 223 FVDPEEDEPDLSAVADVTAQFY 244


>gi|168486226|ref|ZP_02710734.1| histidyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00]
 gi|183570682|gb|EDT91210.1| histidyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00]
          Length = 429

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 60/404 (14%), Positives = 126/404 (31%), Gaps = 56/404 (13%)

Query: 276 FQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           +Q +  + R   K  +Y E+ TP       ++          ++   +  D   K  R  
Sbjct: 20  WQYVEGFAREIFKRYNYAEVRTPIF---EHYEVISRSVGDTTDIVTKEMYDFYDKGDRHI 76

Query: 335 ALKPMNCPGHVAVFNHGLKS-----YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
            L+P    G   V    +++       + P +    G ++R E   +     R+R F Q 
Sbjct: 77  TLRP---EGTAPVVRSYVENKLFAPEVQKPSKFYYMGPMFRYERPQA----GRLRQFHQI 129

Query: 390 DAHVFCTKEQM-FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWD------ 442
               F +       E + +    +      G +  +  L     +     AL D      
Sbjct: 130 GVECFGSSNSATDVETIVMAAHFLKEIGIQGVKLHLNTLGNPESRAAYRQALIDYLTPLK 189

Query: 443 -----DAENIMKG----VLDTIKNSSQDRINTGV-------LLGEGAFYGPK-------F 479
                D++  ++     VLD+ +   +  + +            +  F   +        
Sbjct: 190 ETLSKDSQRRLEENPLRVLDSKEKEDKVAVESAPSILDFLDEESQAHFDAVRQMLENLGV 249

Query: 480 EYILKDAI--GRDWQCGTIQVDFNLPSRFNAFYVN---SHSEKCHPVMIHRAVFG---SI 531
           +YI+   +  G D+   TI          +              +      A FG    +
Sbjct: 250 DYIIDTNMVRGLDYYNHTIFEFITEIEGNDLTVCAGGRYDGLVAYFGGPETAGFGFGLGV 309

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           ER + I+    +G      + +   +  +   A   A E+   L+      E D+ N  +
Sbjct: 310 ERLLLIL--EKQGVALPIENALDVYIAVLGDGANVKALELVQALRQQGFKAERDYLNRKL 367

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
             + +   +     +I  G+ E     + ++   +    +VSL 
Sbjct: 368 KAQFKSADVFAAKTLITLGESEVESGQVTVKNNQTREEVQVSLE 411


>gi|313637763|gb|EFS03118.1| alanyl-tRNA synthetase [Listeria seeligeri FSL S4-171]
          Length = 879

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/212 (17%), Positives = 79/212 (37%), Gaps = 11/212 (5%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFS 115
            ++++   +  R   V  H+  H++  A++    E     G ++  D   +DF      +
Sbjct: 548 DTVKLSVDKVKRRETVKNHTATHLLHRALKDTLGEHVNQAGSLVSPDRLRFDFSHFGQIT 607

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            +EL ++E+ + E I      + + +   +A+EL        K          + V + +
Sbjct: 608 EEELTKMEEIVNEKIWEQIAVVIEEMPIAEAKELGAMALFGEKY--------GDIVRVVQ 659

Query: 176 QGEW-FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
            G++  +LC G HVR+T  +  F  + +                  Y      +  L   
Sbjct: 660 VGKYSIELCGGVHVRNTADIGLFKIVSETGIGAGTRRIEAVTGKAAYHFVTEQENTLKHA 719

Query: 235 LYFLEESEKRDHRKLA-REMDLFHIAEDGSGV 265
              L+ S K   +K+   + DL  +  +   +
Sbjct: 720 ANLLKTSTKETPQKIELLQADLREVRRENDSL 751


>gi|288928178|ref|ZP_06422025.1| serine--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108]
 gi|288331012|gb|EFC69596.1| serine--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108]
          Length = 429

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 42/341 (12%), Positives = 97/341 (28%), Gaps = 34/341 (9%)

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPA-KENVTLYRQGE 178
             +EK ++    R     K   + ++A  +        K    + +   K  V +Y++ +
Sbjct: 28  DAVEKVLETDKRRREAQQKLDKNKQEANSMSRQIGMLMKDGKTQEVEEVKAKVAVYKEND 87

Query: 179 -----WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQ 233
                  D            +          G     D+N  ++ +  G      ++   
Sbjct: 88  KQLQAQMDEAEQELTTLLCNIPNIPADEVPEG----KDANDNVVVKEGGIMPQLPEDALC 143

Query: 234 YLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYE 292
           +    ++    D     +           +G   +  K  ++ + L ++ +    K  Y 
Sbjct: 144 HWDLCKKYNLIDFDLGVKITG--------AGFPIYIGKMARLQRALEAFFLDEARKSGYL 195

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P V++            Y       K       +     L P        +F   +
Sbjct: 196 EVQPPLVVN--------QASGYGTGQLPDKEGQMYHAEQDDLYLIPTAEVPVTNIFRDVI 247

Query: 353 KSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
              ++LPV    + + +R E       + GL R+  F + +       E       K+  
Sbjct: 248 LDEKDLPVMRCAYSACFRREAGSYGKDVRGLNRLHQFDKVEIVRIDKPEHSHESHKKMLE 307

Query: 410 LIISIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAEN 446
            +  + +       ++ L                +W  A+ 
Sbjct: 308 HVEGLLQKLELPYHILLLCGGDMSFTSSICYDFEVWSAAQK 348


>gi|70725009|ref|YP_251923.1| seryl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
 gi|123661703|sp|Q4LAK8|SYS_STAHJ RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|68445733|dbj|BAE03317.1| seryl-tRNA synthetase (Serine-tRNA ligase) [Staphylococcus
           haemolyticus JCSC1435]
          Length = 428

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 49/357 (13%), Positives = 117/357 (32%), Gaps = 35/357 (9%)

Query: 106 YDFDKEQPFSSDELAQIEKKMQEII--ARDSPFLKQYLSHEKARELFESKKEAYKVEILE 163
            +   + P   DE+ +++ + +++I    +    +  +S E A +    +     ++ + 
Sbjct: 18  IELRGDDPKVVDEVLELDNERRQLIGKTEEMKARRNKVSEEIAEKKRNKENADDVIKEMR 77

Query: 164 SIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGT 223
            +  +      +  E  +  R   +R          L+         D     + + +GT
Sbjct: 78  ELGDEIKENDAKLNEVDNKVRDILIR-------IPNLIAEDVPQGDSDEENVEVKK-WGT 129

Query: 224 AWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYM 283
                 E   +   +EE +  D  + A+      +             G  + + L++YM
Sbjct: 130 PREFDFEPKAHWDLVEELKMADFERAAKISGARFVYLTK--------DGALLERALMNYM 181

Query: 284 RRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
             K   +  Y E+ TPQ+++      +G    +  ++F V        +       P   
Sbjct: 182 LTKHTTQHGYTEMMTPQLVNADTMFGTGQLPKFEEDLFKV--------EKEGLYTIPTAE 233

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKE 398
                 +   +     LP +     + +R+E   +     GL+R+  F + +       E
Sbjct: 234 VPLTNFYRDEIIQPGVLPEKFTAQTACFRSEAGSAGRDTRGLIRLHQFDKVEMVRIEKPE 293

Query: 399 QMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
             ++    +     +I ++ G     V L T              +W  + +  K +
Sbjct: 294 DSWDALEDMTQNAEAILEELGLPYRRVILCTGDIGFSASKTYDLEVWLPSYDNYKEI 350


>gi|323340840|ref|ZP_08081092.1| histidine--tRNA ligase [Lactobacillus ruminis ATCC 25644]
 gi|323091963|gb|EFZ34583.1| histidine--tRNA ligase [Lactobacillus ruminis ATCC 25644]
          Length = 435

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 63/401 (15%), Positives = 121/401 (30%), Gaps = 62/401 (15%)

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKP--MNCPGHVAVF 348
           Y+E+ TP   +  ++ ++       +++   +  D   K  R   L+P          V 
Sbjct: 46  YQEMRTPIFENFEVFSRTSGET---SDIVTKEMYDFFDKGDRHVTLRPEGTAGFVRSYVE 102

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
           N       + P +    G ++R E   +     R R F Q     F       +   ++ 
Sbjct: 103 NKLYGPEIQKPFKTYYIGPMFRYERPQA----GRFREFHQIGVEAFGVDNPTLDV--EVI 156

Query: 409 NLIISIYKDFGFE------KIMVKLSTRPEKRVGSDALWDDAENIMKG------------ 450
            + I + K FG          +    +R   R       +  E  +              
Sbjct: 157 AMAIELLKSFGLNSLKLALNTLGDNESRAAYRQALIDYLEPFEAELSDDSKERLHKNPLR 216

Query: 451 VLDTIKNSSQDR-------INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLP 503
           VLD+     Q         ++      +  F   K    L D +G +++  +  V     
Sbjct: 217 VLDSKDEGDQKIVEGAPSILDYLTDDAKKHFETVK---SLLDDLGIEYEIDSNMVRGLDY 273

Query: 504 SRFNAFYVNSHS---------------------EKCHPVMIHRAVFGSIERFIGIMIENF 542
                F + S S                     +   P          +ER + I+ E  
Sbjct: 274 YNHTIFEIMSDSKVFSGKWTTVCAGGRYNGLVEQLGGPETPGIGFALGVERLLLIL-EAE 332

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
           +    +  + +   V  I  S      +IA  L+S   S + D+ +     + +  S   
Sbjct: 333 EDAFDIE-NDLDVYVVGIGESTNAETLKIAMSLRSQGFSADRDYLSRKPKAQFKTASKLD 391

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
               +  G+ E +E    +++  +     VSL D      K
Sbjct: 392 AKYTLTIGETELAEGKANLKKMETGEEISVSLNDVYEDFAK 432


>gi|149194975|ref|ZP_01872068.1| alanyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
 gi|149134896|gb|EDM23379.1| alanyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
          Length = 846

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/154 (20%), Positives = 70/154 (45%), Gaps = 10/154 (6%)

Query: 53  PVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKE 111
            ++ G   +   ++ R      HS  H++  A++ +  E     G ++E +   +DF   
Sbjct: 529 KLKVGDEVLAVVDESRREIAKHHSATHLLHSALRKVLGEHITQAGSLVEANRLRFDFTHP 588

Query: 112 QPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENV 171
           +  S +EL +IE+ +  +IAR        +S ++A++L        K          + V
Sbjct: 589 KALSKEELNKIEEMVNRVIARGFEGEVSEMSIDEAKKLGAMALFGEKY--------GDIV 640

Query: 172 TLYRQGEW-FDLCRGPHVRSTGQVKKFFKLMKVA 204
            + + G++  +LC G HV++T ++  F+ + +  
Sbjct: 641 RVVKFGDFSIELCGGTHVKNTSEIGSFYIVKESG 674


>gi|310767171|gb|ADP12121.1| seryl-tRNA synthetase [Erwinia sp. Ejp617]
          Length = 430

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/188 (11%), Positives = 61/188 (32%), Gaps = 10/188 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
             + + L  +M     +   Y+E   P +++      +G    +  ++F  +  D+    
Sbjct: 170 ALMHRALSQFMLDLHTEQHGYQETYVPYLVNHASLNGTGQLPKFGEDLFHTRPLDEEAS- 228

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
              +AL P +      +    +     LP+++      +R+E         GL+R+  F 
Sbjct: 229 SSNYALIPTSEVPLTNLVRDEILEEESLPLKMTAHTPCFRSEAGAYGRDTRGLIRMHQFD 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI----MVKLSTRPEKRVGSDALWDD 443
           + +       E   +   ++      + +                    ++     +W  
Sbjct: 289 KVEMVHVTRPEDSMDALEELVGHAEKVLQLLNLPYRKVLLCTGDMGFGAQKTYDLEVWLP 348

Query: 444 AENIMKGV 451
           A++  + +
Sbjct: 349 AQDTYREI 356


>gi|322378041|ref|ZP_08052528.1| histidine--tRNA ligase [Streptococcus sp. M334]
 gi|321281023|gb|EFX58036.1| histidine--tRNA ligase [Streptococcus sp. M334]
          Length = 426

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 60/404 (14%), Positives = 126/404 (31%), Gaps = 56/404 (13%)

Query: 276 FQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           +Q +  + R   K  +Y E+ TP       ++          ++   +  D   K  R  
Sbjct: 20  WQYVEGFAREIFKRYNYAEVRTPIF---EHYEVISRSVGDTTDIVTKEMYDFYDKGDRHI 76

Query: 335 ALKPMNCPGHVAVFNHGLKS-----YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
            L+P    G   V    +++       + P +    G ++R E   +     R+R F Q 
Sbjct: 77  TLRP---EGTAPVVRSYVENKLFAPEVQKPSKFYYMGPMFRYERPQA----GRLRQFHQI 129

Query: 390 DAHVFCTKEQM-FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWD------ 442
               F +       E + +    +      G +  +  L     +     AL D      
Sbjct: 130 GVECFGSSNPATDVETIAMAAHFLKEIGIQGVKLHLNTLGNPESRAAYRQALIDYLTPLK 189

Query: 443 -----DAENIMKG----VLDTIKNSSQDR-------INTGVLLGEGAFYGPK-------F 479
                D++  ++     VLD+ +   +         ++      +  F   +        
Sbjct: 190 ETLSKDSQRRLEENPLRVLDSKEKEDKVAVENAPSILDFLDEESQAHFDAVRQMLENLGV 249

Query: 480 EYILKDAI--GRDWQCGTIQVDFNLPSRFNAFYVN---SHSEKCHPVMIHRAVFG---SI 531
           +YI+   +  G D+   TI          +              +      A FG    +
Sbjct: 250 DYIIDTNMVRGLDYYNHTIFEFITEIEGNDLTVCAGGRYDGLVAYFGGPETAGFGFGLGV 309

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           ER + I+    +G      + +   +  +   A   A E+   L+      E D+ N  +
Sbjct: 310 ERLLLIL--EKQGVALPIENSLDVYIAVLGEGANVKALELVQALRQQGFKAERDYLNRKL 367

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
             + +   +     +I  G+ E     + ++   +    +VSL 
Sbjct: 368 KAQFKSADVFAAKTLITLGESEVESGQVTVKNNQTREEVQVSLE 411


>gi|313894660|ref|ZP_07828223.1| serine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
 gi|313440850|gb|EFR59279.1| serine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
          Length = 426

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 42/244 (17%), Positives = 82/244 (33%), Gaps = 22/244 (9%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDL--FHIAEDGSGVIF--WHRKGWKIF 276
           G       E  ++    +   E + H  L   +D+  F+ A   SG  F  +   G ++ 
Sbjct: 114 GADEEENVEQRKWGEPRQFDFEVQAHWDLGESLDILDFNRAGKMSGARFTVYKGLGARLE 173

Query: 277 QTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           + LI++M     D   Y E+ TP ++ +     +G    +  +M+ V+           +
Sbjct: 174 RALINFMVDLHVDKHGYTEMMTPYMVTRETLTGTGQLPKFAEDMYHVED--------TEY 225

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDA 391
            L P             + S  ELP     F + +R E   +     GL+R   F + + 
Sbjct: 226 FLIPTAEVTLTNYHGDEILSEEELPKYYTAFTACFRAEAGSAGRDTRGLIRQHQFNKVEM 285

Query: 392 HVFCTKEQMFNECLKIHNLIISIYK----DFGFEKIMVKLSTRPEKRVGSDALWDDAENI 447
                 E  F E   + +    + +     F    +          +     +W  A+  
Sbjct: 286 VKLAKPEDSFKELETLTDNAEEVLRLLELPFRVITLCTGDMGFGSAKTYDVEVWMPAQGK 345

Query: 448 MKGV 451
            + +
Sbjct: 346 YREI 349


>gi|313897393|ref|ZP_07830936.1| alanine--tRNA ligase [Clostridium sp. HGF2]
 gi|312957763|gb|EFR39388.1| alanine--tRNA ligase [Clostridium sp. HGF2]
          Length = 875

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 55/137 (40%), Gaps = 10/137 (7%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGF-YYDFDKEQPFS 115
            ++E+   E  R +    HSC H++  A++ I        G  + + +  +DF   +  +
Sbjct: 547 DAVELQVDEKKRDIITSNHSCTHLLQSALKQIVGSHIQQAGSFVSEEYLRFDFTHFEKVN 606

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            ++L +IE+ +   I       K  +  E+A++             L      + V +  
Sbjct: 607 EEQLKEIERLVNRYIGGHYAVSKVEMPIEEAKK--------SGATALFDEKYGDVVRVVS 658

Query: 176 QGE-WFDLCRGPHVRST 191
            G+   + C G HV +T
Sbjct: 659 MGDVSKEFCGGCHVNNT 675


>gi|269987005|gb|EEZ93280.1| histidyl-tRNA synthetase [Candidatus Parvarchaeum acidiphilum
           ARMAN-4]
          Length = 410

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 60/428 (14%), Positives = 129/428 (30%), Gaps = 92/428 (21%)

Query: 273 WKIFQTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
             + Q  +  +R+     YE      +        S   +     + + +      K   
Sbjct: 16  AVLRQQALESIRK----SYELFGFEPIETPSFEYLSLFTNKSGPEIES-QLYSFEDKKGE 70

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRE---LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
             AL+P +      +    + S  +    P+R    G+V+R E +       R R F Q 
Sbjct: 71  KLALRPEH-----TISKLRVVSGNKSLVFPLRAYSIGNVWRYEDTKK----GRWREFIQA 121

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE----------------- 432
           D  +F + +  ++   +I   I    K  G E   + +S R                   
Sbjct: 122 DIDIFGSADIKYDS--EIIACIDFAIKRLGIENYKINVSNRKILTSLMESLKVEVEKIVQ 179

Query: 433 --------KRVGSDA--------LWDDAENIMKGVLDTIKNSSQDRI------------N 464
                    +VG D         + +     ++  L+  +    + I            N
Sbjct: 180 VLREIDKVHKVGLDEVIKRISELIGETKAEKVRDYLNGKEIPGIEGIKDVEYLISDLKKN 239

Query: 465 TGVL---------LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS 515
            G+           G+  + G  FE+   +   +            +  +F++ +  S  
Sbjct: 240 YGIEGVYFDRSLVRGQDYYDGSIFEFEFTEGELKGVVLAGGGRYDKISMKFDSDFPISGG 299

Query: 516 EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLL 575
                V++   V     +F   +                     ++   +E +++IA  L
Sbjct: 300 AIGFDVIMEVLVSNYKNKFYKTL-------------------CVLSVDDLETSRKIAASL 340

Query: 576 KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
           +   L  +    +  ++  +   + KKI   II G ++  +  + +R   S    K  L 
Sbjct: 341 RKEGLVTDIILEDTPLSKGLNYCNSKKIKYAIIVGKRDLKDNLVTVRDLESKREMKFKLD 400

Query: 636 DAIPILTK 643
             +  +  
Sbjct: 401 SLVEEIKN 408


>gi|262381190|ref|ZP_06074328.1| seryl-tRNA synthetase [Bacteroides sp. 2_1_33B]
 gi|262296367|gb|EEY84297.1| seryl-tRNA synthetase [Bacteroides sp. 2_1_33B]
          Length = 424

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 68/198 (34%), Gaps = 16/198 (8%)

Query: 245 DHRKLAREMDLFHIA----EDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQV 299
            H +LA++ DL          G+G   +  +G ++ + LI++ +       Y EI  P V
Sbjct: 143 PHWELAKKYDLIDFDLGVKITGAGFPVYKGQGARLQRALINFFLDEARDAGYLEIMPPTV 202

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           ++            Y       K       ++    L P        ++   +   ++LP
Sbjct: 203 VN--------SASGYGTGQLPDKEGQMYHCEVDDLYLIPTAEVPVTNIYRDVILDEKQLP 254

Query: 360 VRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ++   +   +R E       + GL R+  F++ +       E       ++ N +  + +
Sbjct: 255 IKNCAYTQCFRREAGSYGKDVRGLNRLHEFSKVELVRIDKPEHSKQSHQEMLNHVEGLLQ 314

Query: 417 DFGFEKIMVKLSTRPEKR 434
                  +++L       
Sbjct: 315 KLELPYRILRLCGGDMSF 332


>gi|255015191|ref|ZP_05287317.1| seryl-tRNA synthetase [Bacteroides sp. 2_1_7]
          Length = 424

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 68/198 (34%), Gaps = 16/198 (8%)

Query: 245 DHRKLAREMDLFHIA----EDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQV 299
            H +LA++ DL          G+G   +  +G ++ + LI++ +       Y EI  P V
Sbjct: 143 PHWELAKKYDLIDFDLGVKITGAGFPVYKGQGARLQRALINFFLDEARDAGYLEIMPPTV 202

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           ++            Y       K       ++    L P        ++   +   ++LP
Sbjct: 203 VN--------SASGYGTGQLPDKEGQMYHCEVDDLYLIPTAEVPVTNIYRDVILDEKQLP 254

Query: 360 VRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ++   +   +R E       + GL R+  F++ +       E       ++ N +  + +
Sbjct: 255 IKNCAYTQCFRREAGSYGKDVRGLNRLHEFSKVELVRIDKPEHSKQSHQEMLNHVEGLLQ 314

Query: 417 DFGFEKIMVKLSTRPEKR 434
                  +++L       
Sbjct: 315 KLELPYRILRLCGGDMSF 332


>gi|254993607|ref|ZP_05275797.1| alanyl-tRNA synthetase [Listeria monocytogenes FSL J2-064]
          Length = 826

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 61/143 (42%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFS 115
            ++++   +  R   +  H+  H++  A++    E     G ++  D   +DF      +
Sbjct: 548 DTVKLAVDKVKRRETIKNHTATHLLHRALKDTLGEHVNQAGSLVSPDRLRFDFSHFGQIT 607

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            +EL ++E+ + E I      + + +   +A+EL        K          + V + +
Sbjct: 608 EEELTKMEEIVNEKIWEQINVVIEEMPIAEAKELGAMALFGEKY--------GDIVRVVQ 659

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G++  +LC G HVR+T  +  F
Sbjct: 660 VGKYSIELCGGVHVRNTADIGLF 682


>gi|242373918|ref|ZP_04819492.1| alanyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
 gi|242348472|gb|EES40074.1| alanyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
          Length = 876

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 63/150 (42%), Gaps = 10/150 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFS 115
             ++    +D R      HS  H++ +A++ +  +     G ++E D   +DF    P S
Sbjct: 547 AEVDASVNKDERRAIQKNHSATHLLHQALKEVLGDHVNQAGSLVEADRLRFDFSHFGPMS 606

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            +E+ Q+E+++ E I R      Q +  ++A+ +        K          + V +  
Sbjct: 607 QEEIDQVERRVNEEIWRGIDVRIQEMGIDEAKSMGAMALFGEKY--------GDIVRVVN 658

Query: 176 QGEW-FDLCRGPHVRSTGQVKKFFKLMKVA 204
              +  +LC G HV +T ++  F  + +  
Sbjct: 659 MAPFSIELCGGIHVNNTSEIGLFKIVSESG 688


>gi|59801613|ref|YP_208325.1| hypothetical protein NGO1254 [Neisseria gonorrhoeae FA 1090]
 gi|75432448|sp|Q5F7C4|SYA_NEIG1 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|59718508|gb|AAW89913.1| putative alanyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090]
          Length = 874

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 61/143 (42%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFS 115
            SI     ++ R+  +  HS  H+M +A++ +        G  +  +   +D    Q  +
Sbjct: 544 DSITAKVDDEIRNANMRNHSATHLMHKALRDVLGGHVEQKGSLVTAESTRFDISHPQAVT 603

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           ++E+A++E+++ E I  +       +S E A++         K          + V + +
Sbjct: 604 AEEIAEVERRVNEAILANVAVNAAIMSMEDAQKTDAMMLFGEKY--------GDEVRVLQ 655

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G +  +LC G HV  TG +  F
Sbjct: 656 MGGFSTELCGGTHVSRTGDIGLF 678


>gi|268685404|ref|ZP_06152266.1| alanyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
 gi|268625688|gb|EEZ58088.1| alanyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
          Length = 874

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 61/143 (42%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFS 115
            S+     ++ R+  +  HS  H+M +A++ +        G  +  +   +D    Q  +
Sbjct: 544 DSVTAKVDDEIRNANMRNHSATHLMHKALRDVLGGHVEQKGSLVTAESTRFDISHPQAVT 603

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           ++E+A++E+++ E I  +       +S E A++         K          + V + +
Sbjct: 604 AEEIAEVERRVNEAILANVAVNAAIMSMEDAQKTDAMMLFGEKY--------GDEVRVLQ 655

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G +  +LC G HV  TG +  F
Sbjct: 656 MGGFSTELCGGTHVSRTGDIGLF 678


>gi|260441692|ref|ZP_05795508.1| alanyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
          Length = 874

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 61/143 (42%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFS 115
            S+     ++ R+  +  HS  H+M +A++ +        G  +  +   +D    Q  +
Sbjct: 544 DSVTAKVDDEIRNANMRNHSATHLMHKALRDVLGGHVEQKGSLVTAESTRFDISHPQAVT 603

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           ++E+A++E+++ E I  +       +S E A++         K          + V + +
Sbjct: 604 AEEIAEVERRVNEAILANVAVNAAIMSMEDAQKTDAMMLFGEKY--------GDEVRVLQ 655

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G +  +LC G HV  TG +  F
Sbjct: 656 MGGFSTELCGGTHVSRTGDIGLF 678


>gi|290999699|ref|XP_002682417.1| predicted protein [Naegleria gruberi]
 gi|284096044|gb|EFC49673.1| predicted protein [Naegleria gruberi]
          Length = 664

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 51/357 (14%), Positives = 100/357 (28%), Gaps = 59/357 (16%)

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
              V+D  L+  S  +      M           +     LKP +         + ++SY
Sbjct: 205 FQHVMDPKLFSLSRGYIYEDYEMKF---------NYPNVYLKPNSEWAIFPYLKNIIRSY 255

Query: 356 RELPVRLA----EFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI 411
            +LP ++      F  V  +E    L      +   Q + H     E+     +      
Sbjct: 256 IQLPYKVICKTKNFQQVMSDE-GIQLPLFYGNKEQYQHEIHTCHESEENALSYMNDIMWN 314

Query: 412 ISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGE 471
                       +    +           W    +  + ++  +       +NT V +  
Sbjct: 315 RVYLPVLLNVCNLWNGISYHLFP------WKAFSHCKQAIVFDVSLPF---VNTSVNIAR 365

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
             +YG                   I  D      +N  Y         P+        S 
Sbjct: 366 TNYYG------------------RIFSDV-----YNIVYRLKQDNFTSPIFQTCGNISS- 401

Query: 532 ERFIGIMIENFKGNLPLWLSPI----QAIVTTITSSAVEY------AQEIANLLKSHHLS 581
            R +G    +   +  L L       Q ++  + S + +        + +   LKS    
Sbjct: 402 -RILGACAASCSDDKGLRLHSTMNKYQIVIVPMLSKSCDTNILYENVRSMEKKLKSFGFR 460

Query: 582 IETDFRNETIN-YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
           +  D R  T N  K  +   K + +++  G +E    +I I+   S     +   + 
Sbjct: 461 VHADMRYATKNVEKFYQWESKGVSLVVSIGKQELEGSTITIKGRNSLKKSTIPANEV 517


>gi|224063277|ref|XP_002301073.1| predicted protein [Populus trichocarpa]
 gi|222842799|gb|EEE80346.1| predicted protein [Populus trichocarpa]
          Length = 523

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 50/317 (15%), Positives = 110/317 (34%), Gaps = 31/317 (9%)

Query: 137 LKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKK 196
           +++ +   +A     + K   KVEI E     E     ++G            +T +   
Sbjct: 126 VQKEVERLRAERNAVANKMKGKVEISERQKLIEEGKNLKEG-----------LATLEEDL 174

Query: 197 FFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLF 256
                ++        +    L  I G   +T +++            RDH +L +E+DLF
Sbjct: 175 VKLTDELQLEAQCIPNLTHPLVPIGGEDSSTVRKMAGTPRDFGFP-VRDHLQLGKELDLF 233

Query: 257 HIAE--DGSGVIFWHRKGWKIFQT--LISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHW 311
                 + SG  F++ K   +     L+++ +   +K  +  + TP+++   + ++ G  
Sbjct: 234 DFDAAAEVSGSKFYYLKNEAVMLEMALVNWTLSEVMKKGFTPLTTPELVRSSVVEKCGFQ 293

Query: 312 DSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRN 371
                N            +     L          +    + +  +LP++   +   +R 
Sbjct: 294 PR-GDNTQVY------SIEGSDQCLIGTAEIPVGGIHMDAILAETQLPLKYVAYSHCFRT 346

Query: 372 EPS---GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLS 428
           E      +  GL RV  FT+ +  V C  E+  +   ++  +   ++   G     + ++
Sbjct: 347 EAGAAGTATRGLYRVHQFTKVEMFVLCRPEESDSYHEELIKIEEDLFSALGLHYKTLDMA 406

Query: 429 TR----PEKRVGSDALW 441
           +     P  R      W
Sbjct: 407 SGDLGAPAYRKFDVEAW 423


>gi|163794125|ref|ZP_02188098.1| Alanine--tRNA ligase [alpha proteobacterium BAL199]
 gi|159180739|gb|EDP65258.1| Alanine--tRNA ligase [alpha proteobacterium BAL199]
          Length = 889

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 60/170 (35%), Gaps = 19/170 (11%)

Query: 47  VCDLSDPVRE----------------GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWP 90
           V D    + +                 ++++    + R      HS  H+M EA++    
Sbjct: 523 VVDTQRKLGDVFVHRGMLSGGALSVGDAVQLTVETERRDRTRANHSATHLMHEALRQRLG 582

Query: 91  EVQVAIGP-IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKAREL 149
           E     G  +  +   +DF      + ++LA +E ++   +  +S    + ++ + A + 
Sbjct: 583 EHVAQKGSMVAPERMRFDFSHPASIAREDLAWVEAEVNRRVRGNSEVTTRLMTPQAAIDE 642

Query: 150 --FESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
                  E Y  E+             R     +LC G HVR TG +  F
Sbjct: 643 GAMALFGEKYGDEVRVVSMGGSADKANRAAWSVELCGGIHVRRTGDIGLF 692


>gi|160890213|ref|ZP_02071216.1| hypothetical protein BACUNI_02653 [Bacteroides uniformis ATCC 8492]
 gi|270294260|ref|ZP_06200462.1| seryl-tRNA synthetase [Bacteroides sp. D20]
 gi|317481474|ref|ZP_07940540.1| seryl-tRNA synthetase [Bacteroides sp. 4_1_36]
 gi|156860601|gb|EDO54032.1| hypothetical protein BACUNI_02653 [Bacteroides uniformis ATCC 8492]
 gi|270275727|gb|EFA21587.1| seryl-tRNA synthetase [Bacteroides sp. D20]
 gi|316902384|gb|EFV24272.1| seryl-tRNA synthetase [Bacteroides sp. 4_1_36]
          Length = 424

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 69/198 (34%), Gaps = 16/198 (8%)

Query: 245 DHRKLAREMDLFHIA----EDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQV 299
            H +LA++ DL          G+G   +  KG ++ + LI++ +    K  Y EI  P V
Sbjct: 143 PHWELAKKYDLIDFDLGVKITGAGFPVYKGKGAQLQRALINFFLDEARKSGYTEIMPPTV 202

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           ++            Y       K       ++    L P        ++   +   ++LP
Sbjct: 203 VNA--------ASGYGTGQLPDKEGQMYHCEVDDLYLIPTAEVPVTNIYRDVILDEKQLP 254

Query: 360 VRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ++   +   +R E       + GL R+  F++ +       E       ++ + +  + +
Sbjct: 255 IKNCAYTQCFRREAGSYGKDVRGLNRLHEFSKVELVRIDKPEHSKQSHQEMLDHVEGLLQ 314

Query: 417 DFGFEKIMVKLSTRPEKR 434
                  +++L       
Sbjct: 315 KLELPYRILRLCGGDMSF 332


>gi|119472239|ref|ZP_01614418.1| alanyl-tRNA synthetase [Alteromonadales bacterium TW-7]
 gi|119445057|gb|EAW26352.1| alanyl-tRNA synthetase [Alteromonadales bacterium TW-7]
          Length = 866

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/145 (21%), Positives = 60/145 (41%), Gaps = 11/145 (7%)

Query: 63  TPEDPRSLAVI-RHSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFSSDELA 120
           T +D R   +   H+  HI+ EA++ +  E     G ++  D   +DF   +  + DEL 
Sbjct: 542 TIDDARRENIKKNHTATHILHEALRQLLGEHVSQKGSLVQADRLRFDFSHFEAVTKDELR 601

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW- 179
            IE+ + + I R+     + ++ + A+          K          + V +   G++ 
Sbjct: 602 DIERVVNDEIRRNFALNTELMAIDDAKAKGAMALFGEKY--------DDEVRVVTIGDYS 653

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVA 204
            +LC G HV   G +  F  + +  
Sbjct: 654 IELCGGTHVERAGDIGLFKIVSESG 678


>gi|94987623|ref|YP_595556.1| alanyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00]
 gi|205830129|sp|Q1MP42|SYA_LAWIP RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|94731872|emb|CAJ55235.1| Alanyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00]
          Length = 884

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/147 (21%), Positives = 57/147 (38%), Gaps = 4/147 (2%)

Query: 52  DPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIED-GFYYDFDK 110
             + +    ++  E  R      H+C HI+   +Q I  +     G ++      +DF  
Sbjct: 547 TILLDQEALLVVSESERLDTARNHTCTHILQSVLQKILGDHVRQAGSLVSPTRLRFDFTH 606

Query: 111 EQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN 170
             P + +E+  IE ++  II  + P   +++  + A E         K   +  +     
Sbjct: 607 IAPLTEEEIHAIELQVNTIIMANLPLRVEFMDQQSALEKGAMALFEEKYGNIVRVV---T 663

Query: 171 VTLYRQGEWFDLCRGPHVRSTGQVKKF 197
           +    Q    +LC G H+ STGQ   F
Sbjct: 664 IGSENQTASIELCGGTHLTSTGQAGCF 690


>gi|300727856|ref|ZP_07061236.1| serine--tRNA ligase [Prevotella bryantii B14]
 gi|299774904|gb|EFI71516.1| serine--tRNA ligase [Prevotella bryantii B14]
          Length = 430

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/245 (13%), Positives = 78/245 (31%), Gaps = 24/245 (9%)

Query: 210 GDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWH 269
            D+   ++ +  G      ++   +   L++    D     +           +G   + 
Sbjct: 120 KDAADNVVVKEGGLKPELPEDALCHWDLLKKYNLVDFDLGVKITG--------AGFPIYL 171

Query: 270 RKGWKIFQTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTI 328
            K  +  + L ++ +    K  Y E+  P V+++           Y       K      
Sbjct: 172 GKMARFQRALEAFFLDEARKSGYLEVQPPYVVNE--------ASGYGTGQLPDKEGQMYH 223

Query: 329 KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRG 385
            +L    L P        +F   +   ++LP++   + + +R E       + GL R+  
Sbjct: 224 ANLDNLYLIPTAEVPVTNIFRDVILDEKDLPIKRCAYSACFRREAGSYGKDVRGLNRLHQ 283

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALW 441
           F + +     T E  +    ++ + +  + K       +++L                +W
Sbjct: 284 FDKVEIVRLDTPEHSYESLKEMMDHVEGLLKKLELPYHILRLCGGDMSFTSAICYDFEVW 343

Query: 442 DDAEN 446
             A+ 
Sbjct: 344 SAAQK 348


>gi|301311140|ref|ZP_07217068.1| serine--tRNA ligase [Bacteroides sp. 20_3]
 gi|300830714|gb|EFK61356.1| serine--tRNA ligase [Bacteroides sp. 20_3]
          Length = 424

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 68/198 (34%), Gaps = 16/198 (8%)

Query: 245 DHRKLAREMDLFHIA----EDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQV 299
            H +LA++ DL          G+G   +  +G ++ + LI++ +       Y EI  P V
Sbjct: 143 PHWELAKKYDLIDFDLGVKITGAGFPVYKGQGARLQRALINFFLDEARDAGYLEIMPPTV 202

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           ++            Y       K       ++    L P        ++   +   ++LP
Sbjct: 203 VN--------SASGYGTGQLPDKEGQMYHCEVDDLYLIPTAEVPVTNIYRDVILDEKQLP 254

Query: 360 VRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ++   +   +R E       + GL R+  F++ +       E       ++ N +  + +
Sbjct: 255 IKNCAYTQCFRREAGSYGKDVRGLNRLHEFSKVELVRIDKPEHSKQSHQEMLNHVEGLLQ 314

Query: 417 DFGFEKIMVKLSTRPEKR 434
                  +++L       
Sbjct: 315 KLELPYRILRLCGGDMSF 332


>gi|319764030|ref|YP_004127967.1| seryl-tRNA synthetase [Alicycliphilus denitrificans BC]
 gi|317118591|gb|ADV01080.1| seryl-tRNA synthetase [Alicycliphilus denitrificans BC]
          Length = 438

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/225 (16%), Positives = 78/225 (34%), Gaps = 15/225 (6%)

Query: 242 EKRDHRKLAREMDL-FHIAEDGSGVIFWHRKG--WKIFQTLISYMRRKI--KDDYEEINT 296
             +DH  L   + L F +    SG  F   KG   ++ + L  +M      +  Y E   
Sbjct: 140 AVKDHVDLGAPLGLDFDMGAKLSGSRFTVMKGPIARLHRALAQFMLDVQTGEHGYTECYV 199

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVK---CADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           P +++    + +G    +  ++FA K      + + D     L P +      +    + 
Sbjct: 200 PYIVNADSLRGTGQLPKFEGDLFAAKKGGQEGEPVPDDAQLYLIPTSEVPLTNLVRGEVV 259

Query: 354 SYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
               LP+RL      +R+E         G++R   F + +       ++ +    ++   
Sbjct: 260 PESALPIRLTAHSPCFRSEAGSYGRDTRGMIRQHQFDKVEMVQIVHPDKSYEALEEMTRH 319

Query: 411 IISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
             ++ +  G    +V L T              +W  A+   + +
Sbjct: 320 AEAVLQKLGLPYRVVCLCTGDMGFGSAKTYDLEVWLPAQGTYREI 364


>gi|118588631|ref|ZP_01546039.1| Alanyl-tRNA synthetase, class IIc:Phosphoesterase,
           DHHA1:Alanyl-transfer RNA synthetase [Stappia aggregata
           IAM 12614]
 gi|118438617|gb|EAV45250.1| Alanyl-tRNA synthetase, class IIc:Phosphoesterase,
           DHHA1:Alanyl-transfer RNA synthetase [Stappia aggregata
           IAM 12614]
          Length = 885

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/161 (22%), Positives = 68/161 (42%), Gaps = 11/161 (6%)

Query: 42  AINGKVCDLSDPVREG------SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVA 95
             +G     S  V EG      ++E+      R      HS  H++ EA++ +       
Sbjct: 525 KADGLFV-HSVTVEEGELVPGLALELKVDHSRRKAIRSNHSATHLVHEALREVLGNHVAQ 583

Query: 96  IGP-IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            G  +  +   +DF   +P S +ELA +E    EI+ +++P   + ++ + A E      
Sbjct: 584 KGSLVTPERLRFDFSHPKPVSDEELATVESFANEIVLQNAPVDTRLMAVDDAIEAGAMAL 643

Query: 155 EAYKV-EILESIPAKENVTLYRQGEWF--DLCRGPHVRSTG 192
              K  E +  +     +   +QG+ +  +LC G HV+ TG
Sbjct: 644 FGEKYGEEVRVVSMGTALHGPKQGKPYSLELCGGTHVKRTG 684


>gi|150007194|ref|YP_001301937.1| seryl-tRNA synthetase [Parabacteroides distasonis ATCC 8503]
 gi|298377619|ref|ZP_06987571.1| serine--tRNA ligase [Bacteroides sp. 3_1_19]
 gi|149935618|gb|ABR42315.1| seryl-tRNA synthetase [Parabacteroides distasonis ATCC 8503]
 gi|298265638|gb|EFI07299.1| serine--tRNA ligase [Bacteroides sp. 3_1_19]
          Length = 424

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 68/198 (34%), Gaps = 16/198 (8%)

Query: 245 DHRKLAREMDLFHIA----EDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQV 299
            H +LA++ DL          G+G   +  +G ++ + LI++ +       Y EI  P V
Sbjct: 143 PHWELAKKYDLIDFDLGVKITGAGFPVYKGQGARLQRALINFFLDEARDAGYLEIMPPTV 202

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           ++            Y       K       ++    L P        ++   +   ++LP
Sbjct: 203 VN--------SASGYGTGQLPDKEGQMYHCEVDDLYLIPTAEVPVTNIYRDVILDEKQLP 254

Query: 360 VRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ++   +   +R E       + GL R+  F++ +       E       ++ N +  + +
Sbjct: 255 IKNCAYTQCFRREAGSYGKDVRGLNRLHEFSKVELVRIDKPEHSKQSHQEMLNHVEGLLQ 314

Query: 417 DFGFEKIMVKLSTRPEKR 434
                  +++L       
Sbjct: 315 KLELPYRILRLCGGDMSF 332


>gi|309775571|ref|ZP_07670571.1| histidine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
 gi|308916665|gb|EFP62405.1| histidine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
          Length = 445

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 62/412 (15%), Positives = 135/412 (32%), Gaps = 58/412 (14%)

Query: 276 FQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSY-RANMFAVKCADDTIKDLRT 333
           +  L   +R+     +Y+EI TP     +++++           M+  +  + +      
Sbjct: 20  WHRLEELIRQFTYVYNYQEIRTPIFEHTNVFKRGNDSSDMVNKEMYTFQLENSSTS---- 75

Query: 334 FALKPMNCPGHVAVF-NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
             L+P    G    F  H +  Y +LP+++   G   R+E         R+R F Q    
Sbjct: 76  LTLRPECTAGVARAFVEHKMYGYADLPIKMYYVGPQCRHERPQK----GRMRIFNQFGVE 131

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKI---MVKLSTRPEKRVGSDALWDDAENIMK 449
           V   K  + +   +   L  S     G + +   +  L     +     AL +  +N + 
Sbjct: 132 VIGAKSPLLDV--ETIALGWSFISALGLKDMKVLINTLGDDESRAAYRKALKEHFKNDIS 189

Query: 450 GVLDTIKNSSQ---------------------DRINTGVLLGEGAFYGPKFEYILKDAIG 488
            +    +   +                      ++   +     A++  K      DA+G
Sbjct: 190 HMCADCQRRYEQNPLRILDCKVDHELPIMKNVPKMADYLNEESKAYF--KQVLEGLDALG 247

Query: 489 RDWQC---GTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG--------- 536
             ++        +D+   + F    VN        V       G +E F G         
Sbjct: 248 IPYEVDDKLVRGLDYYTHTVFEVVSVNKEMGAQSTVFAGGRYDGLVEYFGGPQGMSGIGW 307

Query: 537 ------IMIENFKGNLPLWLSP-IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE 589
                 ++I      + L     + A V  ++  A   A ++   L++     + D+ N 
Sbjct: 308 AMGLERLLIALEAEGISLADEEGLDAYVLCLSPEAATTALQVVTELRAAGYRSDMDYLNR 367

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           +   + +    KK  + I+ G+ E    ++ ++   +     V+L   +  +
Sbjct: 368 SFKAQFKTVDRKKAKVAIMIGETEVQNGTVNMKEIETQEKLTVALDAVVDTM 419


>gi|322434825|ref|YP_004217037.1| seryl-tRNA synthetase [Acidobacterium sp. MP5ACTX9]
 gi|321162552|gb|ADW68257.1| seryl-tRNA synthetase [Acidobacterium sp. MP5ACTX9]
          Length = 451

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/253 (13%), Positives = 73/253 (28%), Gaps = 20/253 (7%)

Query: 211 DSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHR 270
           D +     + +GT          +    E     D  + A+      + + G        
Sbjct: 121 DEHANQQVKTWGTIPTLDFTPKPHWELGEALGVLDFERAAKITGARFVVQFGQ------- 173

Query: 271 KGWKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTI 328
            G ++ + L ++M         Y E+  P +++      +G    +  ++F         
Sbjct: 174 -GARLERALANFMLDLHTRQHGYTEVLPPAMVNSKSLFGTGQLPKFAEDLFHCDDKGPYE 232

Query: 329 K---DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMR 382
                     L P        +F        +L +    + S YR+E         GL+R
Sbjct: 233 PGNYQDSDHWLIPTAEVPLTNIFRDETLDEADLTISFCAYTSCYRSEAGSHGKDTRGLIR 292

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSD 438
              F + +   F   +    E   +     +I +  G     + L T             
Sbjct: 293 QHQFQKVELVKFTRPQDSEAEHENLTRNAETILEQLGLPYRRMLLCTGDMGFSSAKTYDL 352

Query: 439 ALWDDAENIMKGV 451
            +W   ++  + +
Sbjct: 353 EVWLPGQSTYREI 365


>gi|239827844|ref|YP_002950468.1| histidyl-tRNA synthetase [Geobacillus sp. WCH70]
 gi|259511950|sp|C5D510|SYH_GEOSW RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|239808137|gb|ACS25202.1| histidyl-tRNA synthetase [Geobacillus sp. WCH70]
          Length = 423

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 64/432 (14%), Positives = 134/432 (31%), Gaps = 65/432 (15%)

Query: 265 VIFWHRKGWK--------IFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
           + F   +G +         +Q +    R   K  +Y EI TP        +         
Sbjct: 1   MAFQIPRGTQDILPGEVEKWQYVEKIARDICKRYNYHEIRTPIF---EHTELFLRGVGDT 57

Query: 316 ANMFAVKCADDTIKDLRTFALKP--MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP 373
            ++   +      +  R+  L+P          V N    +  + P++L   G ++R E 
Sbjct: 58  TDIVQKEMYTFEDRAGRSMTLRPEGTAPVVRSFVENKMYGNPNQ-PIKLYYIGPMFRYER 116

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM---VKLSTR 430
             +     R R F Q       + +   +   ++  + + +Y+  G +K+      L   
Sbjct: 117 PQA----GRFRQFVQFGVEAIGSNDPAIDA--EVIAMAMELYRSLGLKKLRLVINSLGDV 170

Query: 431 PEKRVGSDALWDDAENIMKGVLDTIKNSSQDR----------------------INTGVL 468
             ++    AL D  ++ +  + +  +   +                        ++    
Sbjct: 171 ETRKAHRQALIDHFKSRIHELCEDCQVRLEKNPLRILDCKKDRDHELMATAPSILDYLND 230

Query: 469 LGEGAFYGPK---------FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS---- 515
                F   K         FE   +   G D+   T     +    F A           
Sbjct: 231 ESRHYFEKVKAYLTKLGIPFEVDPRLVRGLDYYHHTTFEIMSDAEGFGAITTLCGGGRYS 290

Query: 516 ----EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
               E   P         SIER +  + E     LP+    I   V  +   A + +  +
Sbjct: 291 GLVQEIGGPETPGIGFALSIERLLAAL-EAEGITLPIS-EGIDCYVVAVGEKAKDESILL 348

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
            + L+   +  + D+++  I  +++         + I GD E ++  I I+   +    +
Sbjct: 349 VHKLRKAGIVADKDYQDRKIKAQLKSADRLNAKFVAILGDDELAKEVINIKEMSTGEQTE 408

Query: 632 VSLLDAIPILTK 643
           V L   +  L +
Sbjct: 409 VPLHSVVDYLKE 420


>gi|15901936|ref|NP_346540.1| histidyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
 gi|111656967|ref|ZP_01407778.1| hypothetical protein SpneT_02001796 [Streptococcus pneumoniae
           TIGR4]
 gi|32130139|sp|Q97NC9|SYH_STRPN RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|14973634|gb|AAK76180.1| histidyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
          Length = 429

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 60/404 (14%), Positives = 126/404 (31%), Gaps = 56/404 (13%)

Query: 276 FQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           +Q +  + R   K  +Y E+ TP       ++          ++   +  D   K  R  
Sbjct: 20  WQYVEGFAREIFKRYNYAEVRTPIF---EHYEVISRSVGDTTDIVTKEMYDFYDKGDRHI 76

Query: 335 ALKPMNCPGHVAVFNHGLKS-----YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
            L+P    G   V    +++       + P +    G ++R E   +     R+R F Q 
Sbjct: 77  TLRP---EGTAPVVRSYVENKLFAPEVQKPSKFYYMGPMFRYERPQA----GRLRQFHQI 129

Query: 390 DAHVFCTKEQM-FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWD------ 442
               F +       E + +    +      G +  +  L     +     AL D      
Sbjct: 130 GVECFGSSNPATDVETIAMAAHFLKEIGIQGVKLHLNTLGNPESRAAYRQALIDYLTPLK 189

Query: 443 -----DAENIMKG----VLDTIKNSSQDR-------INTGVLLGEGAFYGPK-------F 479
                D++  ++     VLD+ +   +         ++      +  F   +        
Sbjct: 190 ETLSKDSQRRLEENPLRVLDSKEKEDKVAVENAPSILDFLDEESQAHFDAVRQMLENLGV 249

Query: 480 EYILKDAI--GRDWQCGTIQVDFNLPSRFNAFYVN---SHSEKCHPVMIHRAVFG---SI 531
           +YI+   +  G D+   TI          +              +      A FG    +
Sbjct: 250 DYIIDTNMVRGLDYYNHTIFEFITEIEGNDLTVCAGGRYDGLVAYFGGPETAGFGFGLGV 309

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           ER + I+    +G      + +   +  +   A   A E+   L+      E D+ N  +
Sbjct: 310 ERLLLIL--EKQGVTLPIENALDVYIAVLGEGANIKALELVQALRQQGFKAERDYLNRKL 367

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
             + +   +     +I  G+ E     + ++   +    +VSL 
Sbjct: 368 KAQFKSADVFAAKTLITLGESEVESGQVTVKNNQTREEVQVSLE 411


>gi|306840334|ref|ZP_07473106.1| alanyl-tRNA synthetase [Brucella sp. BO2]
 gi|306289733|gb|EFM60922.1| alanyl-tRNA synthetase [Brucella sp. BO2]
          Length = 885

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/141 (23%), Positives = 62/141 (43%), Gaps = 5/141 (3%)

Query: 57  GSIEIITPEDPRSLAVI-RHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPF 114
           G +  +  +  R   +   HS  H++ EA++          G  +  D   +DF   +P 
Sbjct: 545 GDVVELKVDSARRTRIRSNHSATHLLHEALRETLGTHVAQKGSLVAPDRLRFDFSHPKPI 604

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKAREL--FESKKEAYKVEI-LESIPAKENV 171
           S++EL  +E    EII +++P   + ++ + A          E Y  E+ + S+   ++ 
Sbjct: 605 SAEELEAVENLANEIILQNAPVTTRLMAVDDAITEGAMALFGEKYGDEVRVVSMGTAKHG 664

Query: 172 TLYRQGEWFDLCRGPHVRSTG 192
           +   +    +LC G HVR TG
Sbjct: 665 SKAGKAYSVELCGGTHVRQTG 685


>gi|253682724|ref|ZP_04863520.1| serine--tRNA ligase [Clostridium botulinum D str. 1873]
 gi|253561046|gb|EES90499.1| serine--tRNA ligase [Clostridium botulinum D str. 1873]
          Length = 426

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/236 (15%), Positives = 84/236 (35%), Gaps = 22/236 (9%)

Query: 220 IYGTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWK 274
             G +     E+ ++    +   E + H  +  ++ +          GS    +   G +
Sbjct: 115 PDGESDEDNVEIRKWGEVTKFDFESKAHWDIGVDLGILDFERGGKIAGSRFTIYKGLGAR 174

Query: 275 IFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           + + +I+Y          Y EI  P ++++     +G    +  + F V        +  
Sbjct: 175 LERAIINYFLDMHTIDHGYTEILPPYMVNRESMTGTGQLPKFEEDAFKV--------ENN 226

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQD 389
            + L P        ++ + + +  ELP++ A + + +R E   +     GL+R   F + 
Sbjct: 227 GYFLIPTAEVPVTNMYRNEILNGEELPIKHAAYSACFRAEAGSAGRDTRGLVRQHQFNKV 286

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALW 441
           +   F   EQ ++E  K+      + K  G    +V++                +W
Sbjct: 287 ELVKFVKPEQSYDELEKLTRDAEDVLKGLGLPYRVVRICKGDLGFTAALKYDIEVW 342


>gi|253574903|ref|ZP_04852243.1| alanyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14]
 gi|251845949|gb|EES73957.1| alanyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14]
          Length = 874

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 62/150 (41%), Gaps = 10/150 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFS 115
             +      + RS  V  H+  H++ +A++    E     G ++E     +DF      S
Sbjct: 544 AEVTASVDREQRSHTVKNHTATHLLHKALKETLGEHVNQAGSLVEPQRLRFDFSHLGSIS 603

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            +ELA+IE+++ E I    P        ++A+ +        K          + V + +
Sbjct: 604 PEELAEIERRVNEQIWNALPVTTSLKPIDEAKAMGAMALFGEKY--------GDIVRVVK 655

Query: 176 QGEW-FDLCRGPHVRSTGQVKKFFKLMKVA 204
            G++  +LC G HV ++ ++  F  + +  
Sbjct: 656 VGDYSLELCGGCHVNNSAEIGLFKIVSESG 685


>gi|34557793|ref|NP_907608.1| histidyl-tRNA synthetase [Wolinella succinogenes DSM 1740]
 gi|39932011|sp|Q7M8S6|SYH_WOLSU RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|34483510|emb|CAE10508.1| HISTIDYL-TRNA SYNTHETASE [Wolinella succinogenes]
          Length = 442

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 65/429 (15%), Positives = 133/429 (31%), Gaps = 77/429 (17%)

Query: 274 KIFQTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           ++ +T+           +  I TP +    +  + G  D  +  ++           LR 
Sbjct: 28  RLLRTVSEVFE---GFGFVPIETPHLEYAEILVKQGS-DEIQKELYRFFDHGGRDVALRF 83

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
               P+             ++   LP +    G+V+R E +       R R FTQ D   
Sbjct: 84  DQTVPLARFI------SQHRNALGLPFKRYAIGNVFRGERAQR----GRYREFTQCD-FD 132

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE-----KRVGSDALWDDA---- 444
           F   E + ++  +I  +I +  K  G E+  + ++ R          G      D     
Sbjct: 133 FIGSESIGSDA-EIIQVIYASLKALGIERFTISMNNRKILNGICDYFGVKEQTSDVLRII 191

Query: 445 --------ENIMKGVLDTIKNSSQ-------------DRINTGVLLGEGAFYGPKFE--- 480
                   E+++K +++ +  S +             +R +        ++ G       
Sbjct: 192 DKLDKIGEESVIKELVEELGLSQESARGILGFTSLKQERSSEEFFAKVASYEGLSDSLRE 251

Query: 481 --------YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG--- 529
                   Y + D +  D  C  I         +    V   +    P +      G   
Sbjct: 252 GMGEMRALYAILDTLEMDRACYKINFSIARGLGYYTGIVYETTLDALPSIGSVCSGGRYD 311

Query: 530 ------SIERFIGI----------MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIAN 573
                 S ER  G+                G L    +  Q +V  +  S + Y+ ++A 
Sbjct: 312 NLTQSFSKERMSGVGASIGVDRLLAALEELGLLEGRGTSAQVLVACMEESQLAYSYKVAE 371

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK-V 632
            L++  +  E           +   + K  P + + G+ E  +  + ++       +  +
Sbjct: 372 RLRTLGIKSEVYPEAVKPKRSLAYANSKGHPYVAVIGEDELKQGVVTLKDMQWGDQKPCI 431

Query: 633 SLLDAIPIL 641
           S+  A  IL
Sbjct: 432 SIEAAAEIL 440


>gi|121612666|ref|YP_001000209.1| alanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176]
 gi|167005165|ref|ZP_02270923.1| alanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176]
 gi|205830017|sp|A1VYL8|SYA_CAMJJ RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|87250291|gb|EAQ73249.1| alanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176]
          Length = 842

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/142 (23%), Positives = 63/142 (44%), Gaps = 9/142 (6%)

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQI 122
             + R      HS  H++  A++ I        G ++E +   +DF   +  + +EL  I
Sbjct: 538 DTEKREQIARHHSATHLLHHALREILGSHVSQAGSLVESNKLRFDFTHHKALNKEELESI 597

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK++ E+I   S  + + +  E+A++         K +         NV +   GE  +L
Sbjct: 598 EKRVNEMIINSSEAILENMPLEEAKKSGAIALFNEKYQ--------GNVRVLTLGESKEL 649

Query: 183 CRGPHVRSTGQVKKFFKLMKVA 204
           C G HV++T Q+  F+ + +  
Sbjct: 650 CGGTHVKNTAQIGSFYIVKESG 671


>gi|154253470|ref|YP_001414294.1| seryl-tRNA synthetase [Parvibaculum lavamentivorans DS-1]
 gi|171769667|sp|A7HXK4|SYS_PARL1 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|154157420|gb|ABS64637.1| seryl-tRNA synthetase [Parvibaculum lavamentivorans DS-1]
          Length = 435

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/251 (14%), Positives = 78/251 (31%), Gaps = 18/251 (7%)

Query: 210 GDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWH 269
            D +  ++   +G A        ++    E     D    A+          G       
Sbjct: 117 PDESANVIRHSHGKAREMNFAPKEHFDLGEALGLMDFEAAAKMSGARFTVLKGQL----- 171

Query: 270 RKGWKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
               ++ + + ++M         YEE+  P ++       +     +  + FA       
Sbjct: 172 ---ARLERAIGNFMVDLHTTEFGYEEVAPPLMVRDDAMFGTAQLPKFEDDQFATF-KGLA 227

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVR 384
             D   + L P        +    + S  ELP R   + + +R E   +     G++R  
Sbjct: 228 RDDQEKYWLIPTAEVPLTNLVRESILSEEELPKRFTAYTACFRAEAGSAGRDTRGMIRQH 287

Query: 385 GFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDAL 440
            F++ +     T E+   E  ++ +    + K       ++ LST              +
Sbjct: 288 QFSKVELVSITTPEKSREEHERMLSCAEEVLKRLDLHYRVMTLSTGDMGFASRKTYDIEV 347

Query: 441 WDDAENIMKGV 451
           W   +N  + +
Sbjct: 348 WLPGQNAFREI 358


>gi|58617455|ref|YP_196654.1| histidyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel]
 gi|75507481|sp|Q5FG57|SYH_EHRRG RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|58417067|emb|CAI28180.1| Histidyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel]
          Length = 414

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 63/410 (15%), Positives = 134/410 (32%), Gaps = 92/410 (22%)

Query: 288 KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
           +  +  ++TP +    ++ + G+     +++   +  +   K      L+P       A+
Sbjct: 36  RYGFIPVDTPIIEFTEVFTKLGN----TSDIVTKEMYNFKDKAGEDITLRP---EFTSAI 88

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE---- 403
               +     +PV+L   G V+R E         R R F Q +   F +   + +     
Sbjct: 89  VRLLISKNLTIPVKLFSSGPVFRYERPQKC----RQRQFHQINFEFFGSDSPIADVEMIS 144

Query: 404 -CLKIH------NLIISIYKDFGFEKIMVKLSTRPEKRVG-------------------- 436
            C  I       + I       G ++ +        + +                     
Sbjct: 145 LCYNILSELKLSDRIKLEINFLGDQETINSYKIHLVEYLNKYQKDLSEDSQRRLVVNPLR 204

Query: 437 -------------------SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG--EGAFY 475
                              SD    +++N  K VLD + N S   IN  +      G  Y
Sbjct: 205 ILDSKSPEDCKILLNAPSISDFYTQNSQNFFKEVLDGLDNLS---INYVINHNIVRGLDY 261

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
             K  +    +          Q       R++   V S      P +        +ER +
Sbjct: 262 YCKTVFEFTTSE------LGSQNSVIAGGRYDGL-VKSMGGHSTPAI---GFAAGVER-L 310

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIE-TDFRNETINYK 594
             +I+           P + ++  I   A  YA ++A  L+   + +   ++R  ++   
Sbjct: 311 SALIDYEHKK------PKRIVLIPIGDDATSYAIKLAYELRCKGIHVCWNNYRGTSL--- 361

Query: 595 IREHSIKKIP---IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
             ++ ++K     I++I GD+E    ++ ++   +   Q V++ D +  L
Sbjct: 362 --KNELRKANDTDIVLIFGDEELQSNTVKVKDMKTGDQQNVAVCDLLDNL 409


>gi|189499373|ref|YP_001958843.1| histidyl-tRNA synthetase [Chlorobium phaeobacteroides BS1]
 gi|229558645|sp|B3ELN3|SYH_CHLPB RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|189494814|gb|ACE03362.1| histidyl-tRNA synthetase [Chlorobium phaeobacteroides BS1]
          Length = 434

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 64/429 (14%), Positives = 142/429 (33%), Gaps = 74/429 (17%)

Query: 276 FQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQS--GHWDSYRANMFAVKCADDTIKDLR 332
           ++ +   + R +    ++EI TP      L+Q+S     D     MF+ +       D R
Sbjct: 21  WKYIEGVIHRVVGLYGFQEIRTPVFEYTDLFQRSIGSTTDIVGKEMFSFR----PEPDGR 76

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD--D 390
           +  L+P    G +  F     S      +L     ++R E   +     R R F+Q   +
Sbjct: 77  SVTLRPEMTAGVMRAFLQANLSSASPVHKLYYIAELFRKERPQA----GRQRQFSQFGAE 132

Query: 391 AHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKG 450
                + E +     ++ ++++ ++   G   + ++++T     +G         + ++ 
Sbjct: 133 MLGASSPEAVA----EVIDMMMQVFTSLGVSGLRLRINT-----LGDLDDRVRYRDALRA 183

Query: 451 VLD----TIKNSSQDRI-----------NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGT 495
            L+     +   S++R+           N  +         PK    L  +   ++    
Sbjct: 184 YLEPHSGLLDAPSRERLEKNPLRILDSKNPDIQSVIA--DAPKLHDFLNPSARAEFDQVL 241

Query: 496 IQVDFNLPS--------RFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE------- 540
           + +D             R   +Y ++  E   P +  +   G   R+ G+  E       
Sbjct: 242 LYLDQKSIEYVIDPLLVRGLDYYCHTAFEVVSPELGAQDAIGGGGRYDGLARELGSKSDI 301

Query: 541 -----NFKGNLPLWLSPIQ------------AIVTTITSSAVEYAQEIANLLKSHHLSIE 583
                       L     Q              +         +A    +LL+   +  E
Sbjct: 302 PAVGFAVGMERLLITMEKQGLLRHIVPSGPRVYIVLQNEELKTHALSACDLLRRSGIRTE 361

Query: 584 TDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL-- 641
            D    ++  ++RE + +     +  G  E   ++ G++   ++    +S+ + I  L  
Sbjct: 362 MDLCGRSMKAQMREANRQHADYALFVGKSEVESQAYGLKNLRTSEQDFLSIREMIARLAS 421

Query: 642 -TKESLPPD 649
            TK    PD
Sbjct: 422 STKHVEVPD 430


>gi|229169146|ref|ZP_04296861.1| Histidyl-tRNA synthetase 2 [Bacillus cereus AH621]
 gi|228614374|gb|EEK71484.1| Histidyl-tRNA synthetase 2 [Bacillus cereus AH621]
          Length = 476

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 73/465 (15%), Positives = 151/465 (32%), Gaps = 64/465 (13%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWK--------IFQTLISY 282
              Y   +   +  +       + L    E+   +     +G +        ++Q +   
Sbjct: 21  HHGYNTLVPTVQTVEAGVFLFLLRLKQFEEEL-NMSIQIPRGTQDILPGSVELWQYIEGQ 79

Query: 283 MRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPM-N 340
            R   +  +Y+EI TP        +          ++   +      +  R+  L+P   
Sbjct: 80  ARDICRRYNYKEIRTPMF---EHTELFLRGVGDTTDIVQKEMYSFQDRGERSLTLRPEGT 136

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
            P   +   + +      P +L   G ++R E   +     R R F Q       + +  
Sbjct: 137 APVVRSYVENKMFGDATQPTKLYYIGQMFRYERPQA----GRYRQFVQFGIEAIGSNDPA 192

Query: 401 FNECLKIHNLIISIYKDFGFEKI---MVKLSTRPEKRVGSDALWDDAENIMKG------- 450
            +   ++  L +  Y+  G + I   +  L     ++   DAL    E  +         
Sbjct: 193 IDA--EVIALAVEFYRGMGLKNIKVVLNSLGDAASRQAHRDALIAHFEPRIGEFCSDCQS 250

Query: 451 --------VLDTIKNSSQDRINT-----GVLLGEGAFYGPKFEYILKDAI---------- 487
                   +LD  K+ + + ++T       L  + A Y  K + +L              
Sbjct: 251 RLEKNPLRILDCKKDRNHELMSTAPSITEYLNEDSAVYYDKVQELLTTMDVPFEKDPNLV 310

Query: 488 -GRDWQCGTIQVDFNLPSRFNAFYVNSHS--------EKCHPVMIHRAVFGSIERFIGIM 538
            G D+   T+    +    F A    S          E   P M       SIER I  +
Sbjct: 311 RGLDYYQHTVFEIMSEAEGFGAITTLSGGGRYNGLVQEIGGPEMPGIGFAMSIERLIMAL 370

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
            +     LP+    I   V  +   A + A ++A  L+   LS+E D+ +  +  + +  
Sbjct: 371 -KAENIELPIE-HSIDCYVVALGEKAKDRAAKVAFDLRKAGLSVEKDYLDRKMKAQFKSA 428

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
                  + + G+ E  +  I ++   +   ++V+L      + +
Sbjct: 429 DRLNAKYVAVLGEDELDKGIINLKDMATGGQEEVALDVFASYVAE 473


>gi|284799808|ref|ZP_06390350.1| alanine--tRNA ligase [Neisseria subflava NJ9703]
 gi|284796867|gb|EFC52214.1| alanine--tRNA ligase [Neisseria subflava NJ9703]
          Length = 624

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 62/143 (43%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFS 115
            S+     ++ R+  +  HS  H+M +A++ +  E     G  +  +   +D    Q  +
Sbjct: 294 DSVTAKVDDEIRNANMRNHSATHLMHKALRDVLGEHVEQKGSLVTAESTRFDISHPQAVT 353

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           ++E+A++E+++ E I  +       +S E A++         K          + V + +
Sbjct: 354 AEEIAEVERRVNEAILANVAVNAAIMSMEDAQKTGAMMLFGEKY--------GDEVRVLQ 405

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G +  +LC G HV  TG +  F
Sbjct: 406 MGGFSTELCGGTHVSRTGDIGLF 428


>gi|37198253|dbj|BAC94089.1| seryl-tRNA synthetase [Vibrio vulnificus YJ016]
          Length = 447

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/248 (14%), Positives = 82/248 (33%), Gaps = 16/248 (6%)

Query: 220 IYGTAWNTQQELTQYLY-FLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKG--WK 274
             G   N   E++++      + E +DH  L    D   F  A   +G  F   KG   +
Sbjct: 126 PNGKDENDNLEISRWGEPKSYDFELKDHVDLGEMGDGLDFASAVKITGARFIVMKGQFAR 185

Query: 275 IFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL- 331
           + + +  +M     +   Y E+  P +++      +G    +  ++F  +   +   D  
Sbjct: 186 LHRAIAQFMLDLHTEEHGYTEMYVPYLVNADSLFGTGQLPKFGKDLFHTEPLTEKASDEE 245

Query: 332 -RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
            R  +L P        +    +    +LP+++      +R+E         GL+R+  F 
Sbjct: 246 PRKLSLIPTAEVPVTNLVRDTISDEADLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFD 305

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI----MVKLSTRPEKRVGSDALWDD 443
           + +       E   N   ++      + +                     +     +W  
Sbjct: 306 KVELVQITKPEDSMNALEELTGHAEKVLQLLELPYRKVLLCTGDMGFGSHKTYDLEVWVP 365

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 366 AQNTYREI 373


>gi|240127048|ref|ZP_04739709.1| alanyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
          Length = 881

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 61/143 (42%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFS 115
            S+     ++ R+  +  HS  H+M +A++ +        G  +  +   +D    Q  +
Sbjct: 551 DSVTAKVDDEIRNANMRNHSATHLMHKALRDVLGGHVEQKGSLVTAESTRFDISHPQAVT 610

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           ++E+A++E+++ E I  +       +S E A++         K          + V + +
Sbjct: 611 AEEIAEVERRVNEAILANVAVNAAIMSMEDAQKTDAMMLFGEKY--------GDEVRVLQ 662

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G +  +LC G HV  TG +  F
Sbjct: 663 MGGFSTELCGGTHVSRTGDIGLF 685


>gi|190571072|ref|YP_001975430.1| alanyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|213019592|ref|ZP_03335398.1| alanyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|190357344|emb|CAQ54775.1| alanyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|212995014|gb|EEB55656.1| alanyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
          Length = 860

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/132 (19%), Positives = 55/132 (41%), Gaps = 9/132 (6%)

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIAR 132
            HS  H++  A++ I  +     G  +  +   +DF   +P + D+L+ +E  +  +I  
Sbjct: 558 NHSATHLLHFALRKILGDHVTQKGSLVAPNRLRFDFSHNKPVTQDQLSSVEDIVNSLIRE 617

Query: 133 DSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTG 192
           +     +    ++A +         K          +NV + + G+  +LC G HV  TG
Sbjct: 618 NLSTSTKVQGMDEAIDEGAMALFGEKY--------GDNVRVVKIGDSKELCGGTHVERTG 669

Query: 193 QVKKFFKLMKVA 204
           ++  F    + +
Sbjct: 670 EIGLFKIAAECS 681


>gi|308066924|ref|YP_003868529.1| Seryl-tRNA synthetase (serine--tRNA ligase) [Paenibacillus polymyxa
           E681]
 gi|171704681|gb|ACB54661.1| seryl tRNA synthetase [Paenibacillus polymyxa]
 gi|305856203|gb|ADM67991.1| Seryl-tRNA synthetase (Serine--tRNA ligase) [Paenibacillus polymyxa
           E681]
          Length = 427

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 83/234 (35%), Gaps = 22/234 (9%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIF 276
           G +     E+ ++    E S   + H +LA+++D+          GS   F+   G ++ 
Sbjct: 115 GASEEDNVEIRRWSEPREFSFTPKAHWELAQDLDILDFEAAAKVTGSRFTFYKGLGARLE 174

Query: 277 QTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           + LI++M      +  YEE+  P ++++     +G    +  ++F ++           +
Sbjct: 175 RALINFMMDLHSSEHGYEEMLPPYIVNRDSLYGTGQLPKFEEDLFKLRD--------TEY 226

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDA 391
            L P             + +  +LP     + S +R+E   +     GL+R   F + + 
Sbjct: 227 YLIPTAEVPVTNYHREEIMNAEQLPKYYVAYSSCFRSEAGSAGRDTRGLIRQHQFNKVEM 286

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKI----MVKLSTRPEKRVGSDALW 441
                 +  + E  K+ N    + +  G                  +     +W
Sbjct: 287 LKLVHPDTSYEELEKMTNNAERVLQLLGLPYRVLALCTGDMGFTSAKTYDLEVW 340


>gi|15892335|ref|NP_360049.1| histidyl-tRNA synthetase [Rickettsia conorii str. Malish 7]
 gi|15619480|gb|AAL02950.1| histidyl-tRNA synthetase [Rickettsia conorii str. Malish 7]
          Length = 439

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 71/426 (16%), Positives = 148/426 (34%), Gaps = 77/426 (18%)

Query: 269 HRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
               +K+   +I+  R   +   Y++++TP V    ++ +S       +++ + +     
Sbjct: 40  LPDDYKVHDYIINKARDVGVLYGYKQMSTPIVEYTKVFNRS---MGESSDVISKEIYSFL 96

Query: 328 IKDLRTFALKP--MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRG 385
            K     AL+P    C     + N   +   +LP++    G V+R +   +     R R 
Sbjct: 97  DKSNDFVALRPEFTACIIRSLISN---RLQHKLPLKFFSTGPVFRYDRPQA----GRQRQ 149

Query: 386 FTQDD-AHVFCTKEQMFNECLKIHNLIISIYKD----------FGFEKIMVKLSTRPEKR 434
           F Q +  ++         + LK+   I+   +            G  +       +  + 
Sbjct: 150 FHQLNYEYIGAKGAITDADTLKLAVDILKALEIEQDTTLELNSLGCNESRSVYQQKLVEY 209

Query: 435 VGS--DALWDDAENIMKG----VLDTIKNSSQD-----RINTGVLLGEGAFY-------- 475
           +    D L ++++  +      +LD+   + Q       + +     E   Y        
Sbjct: 210 LNDFKDQLSEESKIRLSKNPMRILDSKSETDQKIIANAPVLSEYYTDESKEYFEELIQYL 269

Query: 476 ---GPKFEYILKDAIGRDWQCGTI----------QVDFNLPSRFNAFYVNSHSEKCHPVM 522
              G K+    +   G D+ C T           Q       R++       +    P +
Sbjct: 270 DILGVKYSINPRLVRGLDYYCHTAFEFTTKKLGSQSTILAGGRYDGLAKIMGNNDDVPAI 329

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSI 582
                   IER I +M E     +          V  I  + + YA EI + L++ +++I
Sbjct: 330 ---GFAAGIER-IALMREYNISEVKP------VFVLPIGKNNICYALEIVDKLRTENIAI 379

Query: 583 ETDFRNETINYKIREHSIKKI-----PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
                 E++  KI +  +++I       II  GD+E +  ++ I+         V    A
Sbjct: 380 II----ESLG-KIAK-RMQRIFNENAQFIIFIGDEEQANNNLKIKDLKKAEEYIVDFAKA 433

Query: 638 IPILTK 643
           + +L K
Sbjct: 434 LELLKK 439


>gi|291045073|ref|ZP_06570781.1| alanyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
 gi|291011076|gb|EFE03073.1| alanyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
          Length = 881

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 61/143 (42%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFS 115
            S+     ++ R+  +  HS  H+M +A++ +        G  +  +   +D    Q  +
Sbjct: 551 DSVTAKVDDEIRNANMRNHSATHLMHKALRDVLGGHVEQKGSLVTAESTRFDISHPQAVT 610

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           ++E+A++E+++ E I  +       +S E A++         K          + V + +
Sbjct: 611 AEEIAEVERRVNEAILANVAVNAAIMSMEDAQKTDAMMLFGEKY--------GDEVRVLQ 662

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G +  +LC G HV  TG +  F
Sbjct: 663 MGGFSTELCGGTHVSRTGDIGLF 685


>gi|259482954|tpe|CBF77921.1| TPA: glycyl-tRNA synthetase (AFU_orthologue; AFUA_5G05920)
           [Aspergillus nidulans FGSC A4]
          Length = 689

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/288 (12%), Positives = 90/288 (31%), Gaps = 36/288 (12%)

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
           F                   +Y  +G+ + +   + R    +        A  +++    
Sbjct: 398 FRQHMANEMAHYACDCWDAELYTSYGWIECVGC-ADRSAYDLNVHKNKTGAPLVVRETRA 456

Query: 454 TIKNSSQDRINTGVLLGEGAFYGP------KFEYILKDAIGRDWQCGTIQVDFNLPSRFN 507
                 + +I       +   +GP      K      DA+ ++ +   + +D     +  
Sbjct: 457 EPLKVEEWQIEL-----DKKKFGPRFKKDGKTVEAAIDALSQELR-EKLALDLEKTGKIE 510

Query: 508 AFYVNSHSEKCHPVMIHRAVFGSIE------RFIGIMIENFK-----------GNLPLWL 550
             Y+ +  ++     +       IE      R +  ++E+              + P  +
Sbjct: 511 VGYIITIEKRTRVENVREYTPNVIEPSFGIGRILYSLMEHVYYYREGDEARGVLSFPPVI 570

Query: 551 SPIQAIVTTIT--SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIII 608
           +P + ++  ++   +     QE+   L+   +S   D  + +I  +   +     P  + 
Sbjct: 571 APTKVLLVPLSSNPAFRPMVQELTTKLRRLGVSSRVDDSSASIGKRYARNDELGTPFGVT 630

Query: 609 CGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK----ESLPPDCQK 652
              +   + +I +R   ST   + S  + +  L      E    D +K
Sbjct: 631 VDFQSVKDNTITLRDRDSTKQVRASQEEILQALKSLVEGEETWEDVRK 678



 Score = 39.8 bits (91), Expect = 1.6,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 28/71 (39%), Gaps = 2/71 (2%)

Query: 335 ALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
            L+P    G    F   L+ + + +P   A  G  +RNE S    GL+RVR F   +   
Sbjct: 262 YLRPETAQGQFLNFQKLLEFNQQAMPFASASIGKSFRNEISPR-AGLLRVREFLMAEIEH 320

Query: 394 FCTKEQMFNEC 404
           F   E      
Sbjct: 321 FVDPEGGKKHA 331


>gi|223043384|ref|ZP_03613430.1| seryl-tRNA synthetase [Staphylococcus capitis SK14]
 gi|222443173|gb|EEE49272.1| seryl-tRNA synthetase [Staphylococcus capitis SK14]
          Length = 428

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 51/372 (13%), Positives = 125/372 (33%), Gaps = 35/372 (9%)

Query: 91  EVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIAR--DSPFLKQYLSHEKARE 148
           ++++      +     +   + P   DE+ +++++ +++I++  +    +  +S E A++
Sbjct: 3   DIRLFRNEPEKVKSKIELRGDDPKVVDEVLELDEQRRQLISKTEEMKARRNKVSEEIAQK 62

Query: 149 LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYW 208
               +     +  + ++  +      +  E  +  R   +R    +              
Sbjct: 63  KRNKEDADDVIAEMRNLGDEIKENDAKLNEVDNKVRDILIRIPNLIND-------DVPQG 115

Query: 209 RGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFW 268
             D     L + +GT      E   +   +EE +  D  + A+      +          
Sbjct: 116 DSDEENVELKK-WGTPREFDFEPKAHWDLVEELKMADFERAAKVSGARFVYLTK------ 168

Query: 269 HRKGWKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADD 326
              G  + + L++YM  K   +  Y E+ TPQ+++      +G    +  ++F V     
Sbjct: 169 --DGALLERALMNYMITKHTTQHGYTEMMTPQLVNADTMFGTGQLPKFEEDLFKV----- 221

Query: 327 TIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRV 383
              +       P         +   +     LP +     + +R+E   +     GL+R+
Sbjct: 222 ---EKEGLYTIPTAEVPLTNFYRDEIIQPGVLPEKFTGQTACFRSEAGSAGRDTRGLIRL 278

Query: 384 RGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDA 439
             F + +       E  ++    +     SI ++ G     V L T              
Sbjct: 279 HQFDKVEMVRIEKPEDSWDALEDMTKNAESILEELGLPYRRVILCTGDIGFSASKTYDLE 338

Query: 440 LWDDAENIMKGV 451
           +W  + N  K +
Sbjct: 339 VWLPSYNDYKEI 350


>gi|222100169|ref|YP_002534737.1| Alanyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
 gi|221572559|gb|ACM23371.1| Alanyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
          Length = 864

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/150 (21%), Positives = 63/150 (42%), Gaps = 9/150 (6%)

Query: 50  LSDPVREGSIEIITPEDPRSLAVIR-HSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYD 107
           L   +R G    +  +  R    +R H+  H++  A++ +  E     G  +  +   +D
Sbjct: 536 LKGILRRGQKVFLKVDRKRRKDTMRNHTATHLLHAALRKVLGEHVRQAGSLVAPERLRFD 595

Query: 108 FDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPA 167
           F   +  S++E+ ++E  + E I +  P   +Y S+E+A            + +      
Sbjct: 596 FTHYRALSAEEIKKVEDMVNEWIMQAIPVEVRYTSYEEAIRSGV-------IALFTEKYG 648

Query: 168 KENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
                +   G   +LC G HV++TGQ+  F
Sbjct: 649 DVVRVVEVPGVSKELCGGTHVKNTGQIGLF 678


>gi|205374219|ref|ZP_03227018.1| histidyl-tRNA synthetase [Bacillus coahuilensis m4-4]
          Length = 421

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 68/417 (16%), Positives = 147/417 (35%), Gaps = 65/417 (15%)

Query: 276 FQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQS--GHWDSYRANMFAVKCADDTIKDLR 332
           +Q +    +   ++  Y+EI TP      L+ +      D  +  M+  K   D     R
Sbjct: 20  WQYIEEVAKDICRNFQYKEIRTPIFEHAELFTRGVGDTTDIVQKEMYTFKDRGD-----R 74

Query: 333 TFALKPMNCPGHVAVFNHGLKS----YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQ 388
             +L+P    G  AV    +++    +   PV+L   G ++R E   +     R R F Q
Sbjct: 75  DLSLRP---EGTAAVVRSFVENKMFGHANQPVKLFYSGPMFRYERPQA----GRYRQFVQ 127

Query: 389 DDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM--------------VKLSTRPEKR 434
                  +++   +   ++ +L +S+Y+  G +K+                + +     +
Sbjct: 128 FGVEALGSEDPAIDA--EVISLAMSLYQAVGLKKLKLIVNSLGDNESRVAHREALIAHFK 185

Query: 435 VGSDALWDDAENIMKG----VLDTIKNSSQDRINTG-----VLLGEGAFYGPKF------ 479
              +    D +  ++     +LD  K+   + + T       L  E   Y  K       
Sbjct: 186 PRIEEFCTDCQTRLEKNPLRILDCKKDRDHELMATAPSILDYLNEESRSYFKKVQSYLSL 245

Query: 480 ---EYILKDAI--GRDWQCGTIQVDFNLPSRFNAFYVNSHS--------EKCHPVMIHRA 526
              E+++   +  G D+   T     +    F A               E   P      
Sbjct: 246 MDVEFVVDPTLVRGLDYYNHTAFEIMSDAEGFGAITTLCGGGRYNGLVEEIGGPSTPGIG 305

Query: 527 VFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF 586
              SIER +  +  + +       S +   V  +   A +Y+ +I + L+   LS E D+
Sbjct: 306 FALSIERLLAAV--DAEEVELPVESKVDCYVVALGDQAKDYSVKIVSDLRKAGLSAERDY 363

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +  +  + +     +   + + G++E S  +I ++   S   + + +   +  + +
Sbjct: 364 LDRKLKAQFKAADRVQARYVAVLGEEELSSGTINLKDMESGEQESIEISKLVEAIQE 420


>gi|150004460|ref|YP_001299204.1| alanyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482]
 gi|205829986|sp|A6L1L8|SYA_BACV8 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|149932884|gb|ABR39582.1| alanyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482]
          Length = 871

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/144 (20%), Positives = 59/144 (40%), Gaps = 10/144 (6%)

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDELAQ 121
              + R+     HSC H++ EA++ +        G  +  +   +DF   Q  + ++L +
Sbjct: 550 VDTEKRAACAANHSCTHLLDEALRQVLGTHVEQKGSLVTPESLRFDFSHFQKVTDEQLRE 609

Query: 122 IEKKMQEIIARDSPF-LKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +E  +   I  + P    + L  EKA+EL        K          + V + + G   
Sbjct: 610 VEHLVNAKIRENIPLTEYRNLPIEKAKELGAIALFGEKY--------GDEVRVVQFGNSI 661

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVA 204
           + C G HV +TG++     + + +
Sbjct: 662 EFCGGTHVPATGKIGMVRIISESS 685


>gi|332527970|ref|ZP_08404004.1| seryl-tRNA synthetase [Rubrivivax benzoatilyticus JA2]
 gi|332112544|gb|EGJ12337.1| seryl-tRNA synthetase [Rubrivivax benzoatilyticus JA2]
          Length = 430

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 65/188 (34%), Gaps = 11/188 (5%)

Query: 273 WKIFQTLISYM--RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M   +  +  Y E  TP ++++ + + +G    ++ +MF V    D   +
Sbjct: 172 ARLHRALAQFMLDTQTQEHGYTECWTPYIVNREVLEGTGQLPKFKEDMFWVLRGGDE--E 229

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFT 387
            R   L   +           +     LP++L      +R+E   +     G++R   F 
Sbjct: 230 QREQYLISTSEIPLTNTVREQILDAAALPIKLTAHSPCFRSEAGSAGRDTRGMIRQHQFD 289

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E       ++     +I +       ++ L +              +W  
Sbjct: 290 KVEMVQIVRPEDSDAALEQMVGHAEAILQKLELPYRVITLCSGDMGFGSAKTYDLEVWLP 349

Query: 444 AENIMKGV 451
           A+   + +
Sbjct: 350 AQGTYREI 357


>gi|300722254|ref|YP_003711538.1| alanyl-tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
 gi|297628755|emb|CBJ89333.1| alanyl-tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
          Length = 875

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/134 (22%), Positives = 57/134 (42%), Gaps = 10/134 (7%)

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGF-YYDFDKEQPFSSDELAQIEKKMQEIIA 131
           + HS  H++  A++ I  E     G ++ D +  +DF   +   S+++ Q+E  + E I 
Sbjct: 562 LNHSATHLLHAALRQILGEHVAQKGSLVNDKYLRFDFSHFEAMKSEQIRQVENLVNEEIR 621

Query: 132 RDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRS 190
           ++SP + + ++ E A+          K          E V +   G +  +LC G H   
Sbjct: 622 KNSPVVTELMALEDAKSKGAMALFGEKY--------DEKVRVLSMGGFSTELCGGTHASR 673

Query: 191 TGQVKKFFKLMKVA 204
           TG +  F    +  
Sbjct: 674 TGDIGVFRISSESG 687


>gi|293399698|ref|ZP_06643850.1| alanyl-tRNA synthetase [Neisseria gonorrhoeae F62]
 gi|291609949|gb|EFF39072.1| alanyl-tRNA synthetase [Neisseria gonorrhoeae F62]
          Length = 881

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 61/143 (42%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFS 115
            SI     ++ R+  +  HS  H+M +A++ +        G  +  +   +D    Q  +
Sbjct: 551 DSITAKVDDEIRNANMRNHSATHLMHKALRDVLGGHVEQKGSLVTAESTRFDISHPQAVT 610

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           ++E+A++E+++ E I  +       +S E A++         K          + V + +
Sbjct: 611 AEEIAEVERRVNEAILANVAVNAAIMSMEDAQKTDAMMLFGEKY--------GDEVRVLQ 662

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G +  +LC G HV  TG +  F
Sbjct: 663 MGGFSTELCGGTHVSRTGDIGLF 685


>gi|270307939|ref|YP_003329997.1| seryl-tRNA synthetase [Dehalococcoides sp. VS]
 gi|270153831|gb|ACZ61669.1| seryl-tRNA synthetase [Dehalococcoides sp. VS]
          Length = 413

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/210 (18%), Positives = 75/210 (35%), Gaps = 18/210 (8%)

Query: 242 EKRDHRKLAREMDLFHIAE--DGSGVIFWHRKG--WKIFQTLISYMRRKIKD--DYEEIN 295
             + H +L   +D+         SG  F+  KG   ++ + LI++M        DY EI 
Sbjct: 126 TPKPHWELGETLDIIDFDRGIKLSGSRFYILKGEGARLQRALIAFMLDLHTRKHDYTEIY 185

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
            P ++ +     SG+   +  N++              +   P        +    + S 
Sbjct: 186 PPYMIKRECLVASGNLPKFADNLY--------HDAEEDYWWVPTAEAPLTNLHRDEILSV 237

Query: 356 RELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
            +LP+    + + +R E       + G+ R+  F + + + +C  E  F+E  K+     
Sbjct: 238 EQLPIHYVAYTACFRREKMSAGKDVRGIKRLHQFDKVELYKYCKPEDSFDELEKMVADAE 297

Query: 413 SIYKDFGFEKIMVKLSTRPEKRVGSDALWD 442
            I          +K     +   GS   +D
Sbjct: 298 EIADAL-KIPYRLKQLVTADISFGSAKSYD 326


>gi|294778219|ref|ZP_06743645.1| alanine--tRNA ligase [Bacteroides vulgatus PC510]
 gi|294447847|gb|EFG16421.1| alanine--tRNA ligase [Bacteroides vulgatus PC510]
          Length = 872

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/144 (20%), Positives = 59/144 (40%), Gaps = 10/144 (6%)

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDELAQ 121
              + R+     HSC H++ EA++ +        G  +  +   +DF   Q  + ++L +
Sbjct: 551 VDTEKRAACAANHSCTHLLDEALRQVLGTHVEQKGSLVTPESLRFDFSHFQKVTDEQLRE 610

Query: 122 IEKKMQEIIARDSPF-LKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +E  +   I  + P    + L  EKA+EL        K          + V + + G   
Sbjct: 611 VEHLVNAKIRENIPLTEYRNLPIEKAKELGAIALFGEKY--------GDEVRVVQFGNSI 662

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVA 204
           + C G HV +TG++     + + +
Sbjct: 663 EFCGGTHVPATGKIGMVRIISESS 686


>gi|259908927|ref|YP_002649283.1| seryl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
 gi|224964549|emb|CAX56061.1| Seryl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
          Length = 430

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/188 (11%), Positives = 61/188 (32%), Gaps = 10/188 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
             + + L  +M     +   Y+E   P +++      +G    +  ++F  +  D+    
Sbjct: 170 ALMHRALSQFMLDLHTEQHGYQETYVPYLVNHASLYGTGQLPKFGEDLFHTRPLDEEAS- 228

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
              +AL P +      +    +     LP+++      +R+E         GL+R+  F 
Sbjct: 229 SSNYALIPTSEVPLTNLVRDEILEEESLPLKMTAHTPCFRSEAGAYGRDTRGLIRMHQFD 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI----MVKLSTRPEKRVGSDALWDD 443
           + +       E   +   ++      + +                    ++     +W  
Sbjct: 289 KVEMVHVTRPEDSMDALEELVGHAEKVLQLLNLPYRKVLLCTGDMGFGAQKTYDLEVWLP 348

Query: 444 AENIMKGV 451
           A++  + +
Sbjct: 349 AQDTYREI 356


>gi|83720664|ref|YP_442756.1| histidyl-tRNA synthetase [Burkholderia thailandensis E264]
 gi|257138966|ref|ZP_05587228.1| histidyl-tRNA synthetase [Burkholderia thailandensis E264]
 gi|123726593|sp|Q2SWE3|SYH_BURTA RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|83654489|gb|ABC38552.1| histidyl-tRNA synthetase [Burkholderia thailandensis E264]
          Length = 446

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 62/405 (15%), Positives = 122/405 (30%), Gaps = 73/405 (18%)

Query: 289 DDYEEINTPQV--LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA 346
             Y+ I TP V              D     M++   A +         L+P N    V 
Sbjct: 42  YGYQNIRTPIVEHTPLFTRGIGEVTDIVEKEMYSFVDALN----GENLTLRPEN-TAAVV 96

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD--DAHVFCTKEQMFNEC 404
                     + P RL   G ++R+E         R R F Q   +A  F   +      
Sbjct: 97  RAAIEHNMLYDGPKRLWYIGPMFRHERPQR----GRYRQFHQVGVEALGFAGPDADA--- 149

Query: 405 LKIHNLIISIYKDFG--------------FEKIMVKLSTRPEKRVGSDALWDDAENIM-- 448
            +I  +   +++D G               E+   ++         +D L DDA+  +  
Sbjct: 150 -EIVMMCQRLWEDLGLTGIKLEINSLGLAEERAAHRVELIKYLEQHADKLDDDAQRRLYT 208

Query: 449 ---------KGVLDTIKNSSQDRINTGVLLGEGAFYGP-------KFEYILKDAIGRDWQ 492
                       L  I  ++   I+    +    F G           + +   + R   
Sbjct: 209 NPLRVLDTKNPALQEIVRNAPKLIDFLGDVSRAHFEGLQRLLKANNVPFTINPRLVRGLD 268

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIH-------RAVFGS-IERFIGIMIENFKG 544
              + V   +  +  A    +   +  P++            +   IER + ++ E    
Sbjct: 269 YYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQLGGKPTAACGWAMGIERILELLKEEH-- 326

Query: 545 NLPLWLSPIQ----AIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINY----KIR 596
                L P Q      V     +A E A  +A  L+   L +      +        +++
Sbjct: 327 -----LVPEQEGVDVYVVHQGDAAREQAFIVAERLRDTGLDVILHCSADGAGASFKSQMK 381

Query: 597 EHSIKKIPIIIICGDKEASERSIGIR-RFGSTTTQKVSLLDAIPI 640
                     +I G+ E +  +  ++   G+    + S+  ++P+
Sbjct: 382 RADASGAAFAVIFGEDEVTNGTASVKPLRGTGDDGEKSVQQSVPV 426


>gi|319790646|ref|YP_004152279.1| alanyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
 gi|317115148|gb|ADU97638.1| alanyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
          Length = 878

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/142 (17%), Positives = 59/142 (41%), Gaps = 9/142 (6%)

Query: 65  EDPRSLAVIR-HSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDELAQI 122
           ++ R  A+ R H+  H++ +A++ +        G  ++ D   +DF   +  + +EL  +
Sbjct: 558 DEERRRAITRAHTATHLLHKALKEVLGNHVKQAGSLVLPDRLRFDFTHFEAPTKEELRAV 617

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           E+ +   I  + P   + + +++A E         K   +  +     V++   G     
Sbjct: 618 EELVNRWITENYPVKIEEMPYDEALERGAIALFGEKYGSVVRVVDVGGVSVELCG----- 672

Query: 183 CRGPHVRSTGQVKKFFKLMKVA 204
             G HV+ +G +  F    + +
Sbjct: 673 --GTHVKRSGDIGFFKLTSESS 692


>gi|295698414|ref|YP_003603069.1| seryl-tRNA synthetase [Candidatus Riesia pediculicola USDA]
 gi|291157080|gb|ADD79525.1| seryl-tRNA synthetase [Candidatus Riesia pediculicola USDA]
          Length = 438

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/178 (15%), Positives = 63/178 (35%), Gaps = 9/178 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++++ L  +M     D   Y E+  P +++      +GH   +  ++F++K   +  ++
Sbjct: 170 ARLYRALSQFMIDLHVDQHGYYEVLVPYIVNYQSLYHTGHLPKFMNDLFSIKLNKNLKEN 229

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
              + L P      V +    + SY  LP++L    + +R E         GL+R   F 
Sbjct: 230 HEDYFLVPTGEVPMVNLVQDKIFSYESLPIKLISNTACFRLEAGSYGKKTRGLIRSHQFD 289

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI----MVKLSTRPEKRVGSDALW 441
           + +       E+      ++ +    I +             +       +     +W
Sbjct: 290 KVELVQIVQPEKSRTALEELTSHAEKILELLKLPYRKLILHSENLGFSSSKTYDLEVW 347


>gi|325844825|ref|ZP_08168277.1| alanine--tRNA ligase [Turicibacter sp. HGF1]
 gi|325489012|gb|EGC91400.1| alanine--tRNA ligase [Turicibacter sp. HGF1]
          Length = 873

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/167 (21%), Positives = 73/167 (43%), Gaps = 16/167 (9%)

Query: 40  AVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPI 99
           +V ++G +  L+D V    +++    D        H+  H++ +A++ +        G +
Sbjct: 532 SVQVDGTL-SLNDEVV-CQVQVENRLD----LTKNHTATHLLHQALKDVIGAHANQAGSL 585

Query: 100 IE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYK 158
           +  D   +DF   Q  +S+EL +IE  + E I    P      S E+A+++      + K
Sbjct: 586 VSADRLRFDFTNMQGLTSEELQRIEAIVNEKIWASIPVEVFEKSIEEAKQMGAMALFSEK 645

Query: 159 VEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKFFKLMKVA 204
                     E V + + G++  +LC G HV +T ++  F  + +  
Sbjct: 646 Y--------GETVRVVKAGDYSIELCGGCHVSNTSEIGLFKIISESG 684


>gi|253996801|ref|YP_003048865.1| seryl-tRNA synthetase [Methylotenera mobilis JLW8]
 gi|253983480|gb|ACT48338.1| seryl-tRNA synthetase [Methylotenera mobilis JLW8]
          Length = 424

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/222 (17%), Positives = 76/222 (34%), Gaps = 18/222 (8%)

Query: 242 EKRDHRKLAREMDL-FHIAEDGSGVIFWHRKG--WKIFQTLISYMRRKIKD--DYEEINT 296
           E +DH  +   + L F      SG  F   +G   K+ + L  +M     +   YEE  T
Sbjct: 135 EVKDHTDVGTPLGLDFDTGTKLSGARFTLMRGQIAKMHRALAQFMLDTQTEQHGYEECYT 194

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +++      +G    +  ++F++   D          L P +           +    
Sbjct: 195 PYLVNAETLTGTGQLPKFEEDLFSLAHNDSK------LYLIPTSEVTLTNTVRDEIVPLE 248

Query: 357 ELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
            LP++L      +R+E         G++R   F + +       E  +    ++     +
Sbjct: 249 SLPIKLTAHTPCFRSEAGSYGRDTKGMIRQHQFDKVEMVQIVHPETSYQALEEMVGHAEN 308

Query: 414 IYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
           + K  G    +V L T              +W  A+N  + +
Sbjct: 309 VLKALGLPYRVVSLCTGDMGFGAAKTYDLEVWLPAQNTYREI 350


>gi|229135227|ref|ZP_04264026.1| Histidyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST196]
 gi|228648269|gb|EEL04305.1| Histidyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST196]
          Length = 476

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 74/465 (15%), Positives = 150/465 (32%), Gaps = 64/465 (13%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWK--------IFQTLISY 282
              Y   +   +  +       + L    E+   +     +G +        ++Q +   
Sbjct: 21  HHGYNTLVPTVQTVEAGVFLFLLRLKQFEEEL-NMSIQIPRGTQDILPGSVELWQYIEGQ 79

Query: 283 MRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPM-N 340
            R   +  +Y+EI TP        +          ++   +      +  R+  L+P   
Sbjct: 80  ARDICRRYNYKEIRTPIF---EHTELFLRGVGDTTDIVQKEMYSFQDRGERSLTLRPEGT 136

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
            P   +   + +      P +L   G ++R E   +     R R F Q       + +  
Sbjct: 137 APVVRSYVENKMFGDATQPTKLYYIGQMFRYERPQA----GRYRQFVQFGIEAIGSNDPA 192

Query: 401 FNECLKIHNLIISIYKDFGFEKI---MVKLSTRPEKRVGSDALWDDAENIMKG------- 450
            +   ++  L +  Y+  G + I   +  L     ++   DAL    E  +         
Sbjct: 193 IDA--EVIALAVEFYRGMGLKNIKVVLNSLGDAASRQAHRDALIAHFEPRIGEFCSDCQS 250

Query: 451 --------VLDTIKNSSQDRINT-----GVLLGEGAFYGPK-----------FEYILKDA 486
                   +LD  K+ + + ++T       L  + A Y  K           FE      
Sbjct: 251 RLEKNPLRILDCKKDRNHELMSTAPSITEYLNEDSAVYYDKVQELLTMMDVPFEKDPNLV 310

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHS--------EKCHPVMIHRAVFGSIERFIGIM 538
            G D+   T+    +    F A    S          E   P M       SIER I  +
Sbjct: 311 RGLDYYQHTVFEIMSEAEGFGAITTLSGGGRYNGLVQEIGGPEMPGIGFAMSIERLIMAL 370

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
            +     LP+    I   V  +   A + A ++A  L+   LS+E D+ +  +  + +  
Sbjct: 371 -KAENIELPIE-HSIDCYVVALGEKAKDRAAKVAFDLRKAGLSVEKDYLDRKMKAQFKSA 428

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
                  + + G+ E  +  I ++   +   ++V+L      + +
Sbjct: 429 DRLNAKYVAVLGEDELDKGIINLKDMATGGQEEVALDVFASYVAE 473


>gi|300174045|ref|YP_003773211.1| seryl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811]
 gi|299888424|emb|CBL92392.1| Seryl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811]
          Length = 436

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 63/178 (35%), Gaps = 16/178 (8%)

Query: 272 GWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G ++ + + ++M     K+ Y E+ TP V++      +G +  ++ + + V     T   
Sbjct: 179 GARLERAVYNFMLDEHRKEGYTEMITPIVVNDAAMFGTGQYPKFQDDAYRVSGLAQT--- 235

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE---PSGSLHGLMRVRGFT 387
                  P         ++       +LP++       +R E         GL+R+  F 
Sbjct: 236 -----YIPTAEVPLTNYYSGETLPAEDLPIKFTALSPSFRKEAGAAGKDTRGLIRLHQFN 290

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALW 441
           + +   F   +Q + E   +     SI +  G    ++ LST              +W
Sbjct: 291 KVEMVKFTKPDQSYAELESMTANAESILQKLGLPYHVIMLSTGDMGFSAAKTYDIEVW 348


>gi|189463200|ref|ZP_03011985.1| hypothetical protein BACCOP_03913 [Bacteroides coprocola DSM 17136]
 gi|189430179|gb|EDU99163.1| hypothetical protein BACCOP_03913 [Bacteroides coprocola DSM 17136]
          Length = 872

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/144 (21%), Positives = 59/144 (40%), Gaps = 10/144 (6%)

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDELAQ 121
              D R+     HSC H++ EA++ +        G  +  D   +DF   Q  + +++ +
Sbjct: 551 VDTDKRAACAANHSCTHLLDEALRQVLGAHVEQKGSLVTPDSLRFDFSHFQKVTPEQIRE 610

Query: 122 IEKKMQEIIARDSPF-LKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +E  +   I  + P    + L  EKA+EL        K          + V + + G   
Sbjct: 611 VEHLVNAKIRENVPLTEYRNLPIEKAKELGAIALFGEKY--------GDEVRVVQFGSSI 662

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVA 204
           + C G HV +TG++     + + +
Sbjct: 663 EFCGGTHVSATGKIGMVKIISESS 686


>gi|283478928|emb|CAY74844.1| serS [Erwinia pyrifoliae DSM 12163]
          Length = 447

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/188 (11%), Positives = 61/188 (32%), Gaps = 10/188 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
             + + L  +M     +   Y+E   P +++      +G    +  ++F  +  D+    
Sbjct: 187 ALMHRALSQFMLDLHTEQHGYQETYVPYLVNHASLYGTGQLPKFGEDLFHTRPLDEEAS- 245

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
              +AL P +      +    +     LP+++      +R+E         GL+R+  F 
Sbjct: 246 SSNYALIPTSEVPLTNLVRDEILEEESLPLKMTAHTPCFRSEAGAYGRDTRGLIRMHQFD 305

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI----MVKLSTRPEKRVGSDALWDD 443
           + +       E   +   ++      + +                    ++     +W  
Sbjct: 306 KVEMVHVTRPEDSMDALEELVGHAEKVLQLLNLPYRKVLLCTGDMGFGAQKTYDLEVWLP 365

Query: 444 AENIMKGV 451
           A++  + +
Sbjct: 366 AQDTYREI 373


>gi|229520458|ref|ZP_04409883.1| seryl-tRNA synthetase [Vibrio cholerae TM 11079-80]
 gi|262402530|ref|ZP_06079091.1| seryl-tRNA synthetase [Vibrio sp. RC586]
 gi|229342556|gb|EEO07549.1| seryl-tRNA synthetase [Vibrio cholerae TM 11079-80]
 gi|262351312|gb|EEZ00445.1| seryl-tRNA synthetase [Vibrio sp. RC586]
          Length = 435

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/190 (13%), Positives = 61/190 (32%), Gaps = 11/190 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + +  +M     D   Y E+  P +++      +G    +  ++F  +   +   D
Sbjct: 172 ARLHRAIAQFMLDLHTDQHGYTELYVPYLVNAETLFGTGQLPKFGQDLFHTEPLTEKASD 231

Query: 331 L--RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRG 385
              R  +L P        +    +    ELP+++      +R+E         GL+R+  
Sbjct: 232 EEPRRLSLIPTAEVPVTNLVRDTILDEAELPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQ 291

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALW 441
           F + +       E       ++      + +        V L T              +W
Sbjct: 292 FDKVELVQITRPEDSMAALEELTGHAEKVLQLLDLPYRKVILCTGDMGFGSCKTYDLEVW 351

Query: 442 DDAENIMKGV 451
             A+   + +
Sbjct: 352 VPAQKTYREI 361


>gi|153807618|ref|ZP_01960286.1| hypothetical protein BACCAC_01900 [Bacteroides caccae ATCC 43185]
 gi|149129980|gb|EDM21192.1| hypothetical protein BACCAC_01900 [Bacteroides caccae ATCC 43185]
          Length = 424

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 69/198 (34%), Gaps = 16/198 (8%)

Query: 245 DHRKLAREMDLFHIA----EDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQV 299
            H +LA++ DL          G+G   +  KG ++ + LI++ +    K  Y EI  P V
Sbjct: 143 PHWELAKKYDLIDFDLGVKITGAGFPVYKGKGAQLQRALINFFLDEARKSGYIEIMPPTV 202

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           ++            Y       K       ++    L P        ++   +   ++LP
Sbjct: 203 VNA--------ASGYGTGQLPDKEGQMYHCEVDDLYLIPTAEVPVTNIYRDVILDEKQLP 254

Query: 360 VRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ++   +   +R E       + GL R+  F++ +       E       ++ + +  + +
Sbjct: 255 IKNCAYTQCFRREAGSYGKDVRGLNRLHEFSKVELVRIDKPEHSKQSHQEMLDHVEGLLQ 314

Query: 417 DFGFEKIMVKLSTRPEKR 434
                  +++L       
Sbjct: 315 KLELPYRILRLCGGDMSF 332


>gi|332529232|ref|ZP_08405196.1| alanyl-tRNA synthetase [Hylemonella gracilis ATCC 19624]
 gi|332041455|gb|EGI77817.1| alanyl-tRNA synthetase [Hylemonella gracilis ATCC 19624]
          Length = 888

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/133 (22%), Positives = 54/133 (40%), Gaps = 9/133 (6%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEK 124
             R+  +  HS  H+M +A+  +        G +++ D   +DF    P +  ++A+IE+
Sbjct: 564 SRRAATMRNHSVTHLMHKALHEVLGAHVQQKGSLVDADKTRFDFTHNAPVTPAQIAEIER 623

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
           ++ E I  +S    + L  E A+          K          + V +   G   + C 
Sbjct: 624 RVNEEILANSATQARVLDIEAAKATGAVMLFGEKY--------GDTVRVLDIGTSREFCG 675

Query: 185 GPHVRSTGQVKKF 197
           G HV  TG +  F
Sbjct: 676 GTHVPRTGDIGLF 688


>gi|313157393|gb|EFR56816.1| serine--tRNA ligase [Alistipes sp. HGB5]
          Length = 423

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/240 (15%), Positives = 78/240 (32%), Gaps = 21/240 (8%)

Query: 220 IYGTAWNTQQELTQYLYFLEESEKR-DHRKLAREMDLFHIAE----DGSGVIFWHRKGWK 274
             G        +     + E  E    H +LAR+ D+          G+G   +  KG +
Sbjct: 116 PEGKTAEDNLVVKLVESYTELPENPLPHWELARKYDIIDFDLGVKLTGAGFPVYKGKGAR 175

Query: 275 IFQTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           + + LI+Y +    K  Y E+  P ++++           +       K           
Sbjct: 176 LQRALINYFLDCNTKAGYLEVEPPIMVNE--------ASGFGTGQLPDKEGQMYHATADN 227

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDD 390
           F L P        ++   +    + PV++  +   +R E       + GL R+  F + +
Sbjct: 228 FYLIPTAEVPVTNIYRDVILDEMDFPVKMTAYTPCFRREAGSYGKDVRGLNRLHQFDKVE 287

Query: 391 AHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAEN 446
                  +  +     +   + SI K  G    +++L                ++ +A+ 
Sbjct: 288 IVQLSLPQNSYEALDGMVAHVESIVKSLGLPYRILRLCGGDMSFTSALTYDFEVYSEAQK 347


>gi|307128383|ref|YP_003880414.1| histidyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
 gi|306485445|gb|ADM92314.1| histidyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
          Length = 429

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 60/404 (14%), Positives = 126/404 (31%), Gaps = 56/404 (13%)

Query: 276 FQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           +Q +  + R   K  +Y E+ TP       ++          ++   +  D   K  R  
Sbjct: 20  WQYVEGFAREIFKRYNYAEVRTPIF---EHYEVISRSVGDTTDIVTKEMYDFYDKGDRHI 76

Query: 335 ALKPMNCPGHVAVFNHGLKS-----YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
            L+P    G   V    +++       + P +    G ++R E   +     R+R F Q 
Sbjct: 77  TLRP---EGTAPVVRSYVENKLFAPEVQKPSKFYYMGPMFRYERPQA----GRLRQFHQI 129

Query: 390 DAHVFCTKEQM-FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWD------ 442
               F +       E + +    +      G +  +  L     +     AL D      
Sbjct: 130 GVECFGSSNPATDVETIAMAAHFLKEIGIQGVKLHLNTLGNPESRAAYRQALIDYLTPLK 189

Query: 443 -----DAENIMKG----VLDTIKNSSQDR-------INTGVLLGEGAFYGPK-------F 479
                D++  ++     VLD+ +   +         ++      +  F   +        
Sbjct: 190 ETLSKDSQRRLEENPLRVLDSKEKEDKVAVENAPSILDFLDEESQTHFDAVRQMLENLGV 249

Query: 480 EYILKDAI--GRDWQCGTIQVDFNLPSRFNAFYVN---SHSEKCHPVMIHRAVFG---SI 531
           +YI+   +  G D+   TI          +              +      A FG    +
Sbjct: 250 DYIIDTNMVRGLDYYNHTIFEFITEIEGNDLTVCAGGRYDGLVAYFGGPETAGFGFGLGV 309

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           ER + I+    +G      + +   +  +   A   A E+   L+      E D+ N  +
Sbjct: 310 ERLLLIL--EKQGVALPIENALDVYIAVLGDGANVKALELVQALRQQGFKAERDYLNRKL 367

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
             + +   +     +I  G+ E     + ++   +    +VSL 
Sbjct: 368 KAQFKSADVFATKTLITLGESEVESGQVTVKNNQTREEVQVSLE 411


>gi|296131564|ref|YP_003638811.1| seryl-tRNA synthetase [Thermincola sp. JR]
 gi|296030142|gb|ADG80910.1| seryl-tRNA synthetase [Thermincola potens JR]
          Length = 423

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/244 (16%), Positives = 85/244 (34%), Gaps = 22/244 (9%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAED----GSGVIFWHRKGWKIF 276
           G +    QE+ ++    + + E + H  +   +D+          G+   F+   G ++ 
Sbjct: 114 GASDADNQEIRRWGEPRQFAFEPKAHWDIGENLDILDFERAAKIAGARFTFYKGLGARLE 173

Query: 277 QTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           + +I++M         Y EI  P ++++     +G    +  +MF +        D   +
Sbjct: 174 RAVINFMLDLHTREHGYTEIFPPFLVNRDSMIGTGQLPKFEEDMFRI--------DSVDY 225

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDA 391
            L P        ++   +    +LP+    + + +R E         GL+R   F + + 
Sbjct: 226 FLIPTAEVPVTNIYRGEILDGAQLPLYHVAYSACFRAEAGAHGRDTRGLIRQHQFNKVEL 285

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENI 447
             F   E  F E  K+      + +  G    +V L T              +W  +   
Sbjct: 286 VKFTKPEDSFEELEKLTANAEKVLQLLGLPYRVVTLCTGDLGFSSAKTYDIEVWLPSYQA 345

Query: 448 MKGV 451
            K +
Sbjct: 346 YKEI 349


>gi|255527855|ref|ZP_05394703.1| alanyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|255508466|gb|EET84858.1| alanyl-tRNA synthetase [Clostridium carboxidivorans P7]
          Length = 662

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 47/270 (17%), Positives = 103/270 (38%), Gaps = 22/270 (8%)

Query: 35  AKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQ 93
            KK VA  I   V  LS  +  +  + +   E  R+     H+  H++ EA++ +  E  
Sbjct: 308 CKKNVAGKILHFVKVLSGTIGVDHQVTLNVNEARRNNIRRNHTATHLLNEALRKVLGEHV 367

Query: 94  VAIGPIIEDG-FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFES 152
              G  ++D    +DF+  +  S +EL ++E  + + I +      Q +S E+A+E    
Sbjct: 368 HQSGSYVDDERLRFDFNHFEAPSHEELKKVEALVNDEIVKVLNVQTQSMSLEEAKE---- 423

Query: 153 KKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGD 211
                    L     K+ V +   G++  +LC G HV ++G++  F  + +   A     
Sbjct: 424 ----TGAIALFDNKYKDEVRVVSVGDFSKELCGGTHVSNSGEIGLFKIISEAGVAAGIRR 479

Query: 212 SNRPMLSRIYGTAWNTQQELTQYLYFLE-ESEKRDHRKLAREMDLFHIAEDGSGVIFWHR 270
                  +           + +    L    ++  H+   + ++L    ++         
Sbjct: 480 IEAVTGPKAIAYVEAKNDLIKEIGNKLRCSEKEIIHKLDLQALELKEKDKEI-------- 531

Query: 271 KGWKIFQTLISYMRRKIKDDYEEINTPQVL 300
              ++   L      +I + ++E+   ++ 
Sbjct: 532 --AELKSKLAGSAEDEILNGFQEVKGIKLF 559


>gi|253681881|ref|ZP_04862678.1| alanine--tRNA ligase [Clostridium botulinum D str. 1873]
 gi|253561593|gb|EES91045.1| alanine--tRNA ligase [Clostridium botulinum D str. 1873]
          Length = 879

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 57/133 (42%), Gaps = 10/133 (7%)

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIAR 132
            HS  H++  A++ +  +     G  + ED   +DF   +  + +EL ++E  +  II++
Sbjct: 565 NHSTTHLLHAALREVLGDHVHQSGSYVDEDKLRFDFTHFEGVTQEELTKVEDLVNNIISK 624

Query: 133 DSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRST 191
                   ++ E+AR+         K          + V + + G +  +LC G H+ + 
Sbjct: 625 VYEVETNEMTIEEARQSGAMALFDEKY--------GDKVRVVKIGNFSVELCGGTHISNI 676

Query: 192 GQVKKFFKLMKVA 204
           G++  F  + +  
Sbjct: 677 GKIGLFKIVSESG 689


>gi|153938938|ref|YP_001391861.1| alanyl-tRNA synthetase [Clostridium botulinum F str. Langeland]
 gi|205830033|sp|A7GGF1|SYA_CLOBL RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|152934834|gb|ABS40332.1| alanine--tRNA ligase [Clostridium botulinum F str. Langeland]
          Length = 879

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/172 (21%), Positives = 74/172 (43%), Gaps = 23/172 (13%)

Query: 35  AKKAVAVAI-------NGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQS 87
            KK ++  +       +GKV        E  + +   E+ R+     H+  HI+  A+  
Sbjct: 525 CKKNISGKVLHFVKILDGKVA------LEDQVILKVNEERRNNIRKNHTATHILHAALIK 578

Query: 88  IWPEVQVAIGPIIEDG-FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKA 146
           +  +     G  ++D    +DF   +  S DEL ++EK + + I + +    + +  E+A
Sbjct: 579 VVGDHVQQSGSYVDDERLRFDFSHFEAVSEDELKEVEKIVNKEIMKANAVNTKVMDIEEA 638

Query: 147 RELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
           ++             L     K++V +   G++  +LC G HV ++GQ+  F
Sbjct: 639 KQ--------QGAIALFDNKYKDDVRVVSVGDFSKELCGGTHVSNSGQIGMF 682


>gi|161524637|ref|YP_001579649.1| histidyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|189350607|ref|YP_001946235.1| histidyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|221198080|ref|ZP_03571126.1| histidyl-tRNA synthetase [Burkholderia multivorans CGD2M]
 gi|221204361|ref|ZP_03577378.1| histidyl-tRNA synthetase [Burkholderia multivorans CGD2]
 gi|221212770|ref|ZP_03585746.1| histidyl-tRNA synthetase [Burkholderia multivorans CGD1]
 gi|229558661|sp|A9AGZ7|SYH_BURM1 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|160342066|gb|ABX15152.1| histidyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|189334629|dbj|BAG43699.1| histidyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|221166983|gb|EED99453.1| histidyl-tRNA synthetase [Burkholderia multivorans CGD1]
 gi|221175218|gb|EEE07648.1| histidyl-tRNA synthetase [Burkholderia multivorans CGD2]
 gi|221182012|gb|EEE14413.1| histidyl-tRNA synthetase [Burkholderia multivorans CGD2M]
          Length = 446

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 65/435 (14%), Positives = 130/435 (29%), Gaps = 80/435 (18%)

Query: 269 HRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ--QSGHWDSYRANMFAVKCAD 325
             +   +++   S ++  ++   Y+ I TP V    L+        D     M++   A 
Sbjct: 21  LPQDAGLWEFFESTVKSLLRAYGYQNIRTPIVEHTQLFTRGIGEVTDIVEKEMYSFTDAL 80

Query: 326 DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRG 385
           +         ++P N    V           + P RL   G ++R+E         R R 
Sbjct: 81  N----GEHLTMRPEN-TAAVVRAAIEHNMLYDGPKRLWYIGPMFRHERPQR----GRYRQ 131

Query: 386 FTQD--DAHVFCTKEQMFNECLKIHNLIISIYKDFG--------------FEKIMVKLST 429
           F Q   +A  F   +       +I  +   ++ D G               E+   ++  
Sbjct: 132 FHQVGVEALGFAGPDADA----EIIMMCQRLWDDLGLTGIKLEINSLGLAEERAAHRVEL 187

Query: 430 RPEKRVGSDALWDDAENIM-----------KGVLDTIKNSSQDRINTGVLLGEGAFYGP- 477
                   DAL +DA+  +              L  I  ++   I+         F G  
Sbjct: 188 IKYLEQHVDALDEDAKRRLYTNPLRVLDTKNPALQEIAQNAPKLIDFLGDTSRAHFEGLQ 247

Query: 478 ------KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIH------- 524
                    + +   + R      + V   +  +  A    +   +  P++         
Sbjct: 248 RLLLANNIPFKINPRLVRGLDYYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQLGGKPTA 307

Query: 525 RAVFGS-IERFIGIMIENFKGNLPLWLSPIQ----AIVTTITSSAVEYAQEIANLLKSHH 579
              +   IER + ++ E         L+P Q      V     +A E A   A  L+   
Sbjct: 308 ACGWAMGIERILELLKEEN-------LAPEQEGVDVYVVHQGDAAREQAFIAAERLRDTG 360

Query: 580 LSI----ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS-------TT 628
           L +      D    +   +++          +I G++E +  ++G++             
Sbjct: 361 LDVIFHCSADGAPASFKSQMKRADASGAAFAVIFGEEEVANGTVGVKALRGTGGDGEKNA 420

Query: 629 TQKVSLLDAIPILTK 643
            Q V +      L  
Sbjct: 421 QQTVPVESLTEFLIN 435


>gi|307710165|ref|ZP_07646609.1| histidyl-tRNA synthetase [Streptococcus mitis SK564]
 gi|307619145|gb|EFN98277.1| histidyl-tRNA synthetase [Streptococcus mitis SK564]
          Length = 426

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 63/409 (15%), Positives = 129/409 (31%), Gaps = 57/409 (13%)

Query: 276 FQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           +Q +  + R   K  +Y E+ TP       ++          ++   +  D   K  R  
Sbjct: 20  WQYVEGFAREIFKRYNYAEVRTPIF---EHYEVISRSVGDTTDIVTKEMYDFYDKGDRHI 76

Query: 335 ALKPMNCPGHVAVFNHGLKS-----YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
            L+P    G   V    +++       + P +    G ++R E   +     R+R F Q 
Sbjct: 77  TLRP---EGTAPVVRSYVENKLFAPEVQKPSKFYYMGPMFRYERPQA----GRLRQFHQI 129

Query: 390 DAHVFCTKEQM-FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWD------ 442
               F +       E + +    +      G +  +  L     +     AL D      
Sbjct: 130 GVECFGSSNPATDVETIAMAAHFLKEIGIQGVKLHLNTLGNPESRAAYRQALIDYLTPLK 189

Query: 443 -----DAENIMKG----VLDTIKNSSQDR-------INTGVLLGEGAFYGPK-------F 479
                D++  ++     VLD+ +   +         ++      +  F   +        
Sbjct: 190 ETLSKDSQRRLEENPLRVLDSKEKEDKVAVENAPSILDFLDEESQAHFDAVRQMLENLGV 249

Query: 480 EYILKDAI--GRDWQCGTIQVDFNLPSRFNAFYVN---SHSEKCHPVMIHRAVFG---SI 531
           +YI+   +  G D+   TI          +              +      A FG    +
Sbjct: 250 DYIIDTNMVRGLDYYNHTIFEFITEIEGNDLTVCAGGRYDGLVSYFGGPETAGFGFGLGV 309

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           ER + I+    +G      + +   +  +   A   A E+   L+      E D+ N  +
Sbjct: 310 ERLLLIL--EKQGVALPIENALDVYIAVLGQGANVKALELVQALRQQGFKAERDYLNRKL 367

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
             + +   +     +I  G+ E     + ++   +    +VSL DAI  
Sbjct: 368 KAQFKSADVFAAKTLITLGESEVESGQVTVKNNQTREEVQVSL-DAISQ 415


>gi|293374254|ref|ZP_06620582.1| alanine--tRNA ligase [Turicibacter sanguinis PC909]
 gi|292647087|gb|EFF65069.1| alanine--tRNA ligase [Turicibacter sanguinis PC909]
          Length = 873

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/167 (21%), Positives = 73/167 (43%), Gaps = 16/167 (9%)

Query: 40  AVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPI 99
           +V ++G +  L+D V    +++    D        H+  H++ +A++ +        G +
Sbjct: 532 SVQVDGTL-SLNDEVV-CQVQVENRLD----LTKNHTATHLLHQALKDVIGAHANQAGSL 585

Query: 100 IE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYK 158
           +  D   +DF   Q  +S+EL +IE  + E I    P      S E+A+++      + K
Sbjct: 586 VSADRLRFDFTNMQGLTSEELQRIEAIVNEKIWASIPVEVFEKSIEEAKQMGAMALFSEK 645

Query: 159 VEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKFFKLMKVA 204
                     E V + + G++  +LC G HV +T ++  F  + +  
Sbjct: 646 Y--------GETVRVVKAGDYSIELCGGCHVSNTSEIGLFKIISESG 684


>gi|59798539|sp|Q6LMU3|SYA_PHOPR RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
          Length = 873

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 59/143 (41%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFS 115
             +E       R+   + HS  H++  A++++  E     G +++ D   +DF   +   
Sbjct: 544 DKLEAQVDVVRRTAITLNHSATHLLHSALRNLLGEHVAQKGSLVKPDALRFDFSNLEAVK 603

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            ++L +IE+ + E I  +       +  E A++         K          + V +  
Sbjct: 604 PEQLREIERVVNEQIRLNHSIDTNIMDIESAKQKGAMALFGEKY--------DDEVRVLS 655

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            GE+  +LC G H ++TG +  F
Sbjct: 656 MGEFSTELCGGIHAKNTGDIGLF 678


>gi|54310165|ref|YP_131185.1| alanyl-tRNA synthetase [Photobacterium profundum SS9]
 gi|46914606|emb|CAG21383.1| putative alanyl-tRNA synthetase [Photobacterium profundum SS9]
          Length = 906

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 59/143 (41%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFS 115
             +E       R+   + HS  H++  A++++  E     G +++ D   +DF   +   
Sbjct: 577 DKLEAQVDVVRRTAITLNHSATHLLHSALRNLLGEHVAQKGSLVKPDALRFDFSNLEAVK 636

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            ++L +IE+ + E I  +       +  E A++         K          + V +  
Sbjct: 637 PEQLREIERVVNEQIRLNHSIDTNIMDIESAKQKGAMALFGEKY--------DDEVRVLS 688

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            GE+  +LC G H ++TG +  F
Sbjct: 689 MGEFSTELCGGIHAKNTGDIGLF 711


>gi|322806901|emb|CBZ04471.1| alanyl-tRNA synthetase [Clostridium botulinum H04402 065]
          Length = 879

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/172 (22%), Positives = 75/172 (43%), Gaps = 23/172 (13%)

Query: 35  AKKAVAVAI-------NGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQS 87
            KK ++  I       +GKV        E  + +   E+ R+     H+  HI+  A+  
Sbjct: 525 CKKNISGKILHFVKILDGKVA------LEDQVILKVNEERRNNIRKNHTATHILHAALIE 578

Query: 88  IWPEVQVAIGPIIEDG-FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKA 146
           +  +     G  ++D    +DF   +  S DEL ++EK + + I + +    + ++ E+A
Sbjct: 579 VVGDHVQQSGSYVDDERLRFDFSHFEAVSEDELKKVEKVVNKEIMKANAVNTKVMNIEEA 638

Query: 147 RELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
           ++             L     K++V +   G++  +LC G HV ++GQ+  F
Sbjct: 639 KQ--------QGAIALFDNKYKDDVRVVSVGDFSKELCGGTHVSNSGQIGMF 682


>gi|312171939|emb|CBX80196.1| Seryl-tRNA synthetase [Erwinia amylovora ATCC BAA-2158]
          Length = 430

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/188 (11%), Positives = 61/188 (32%), Gaps = 10/188 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
             + + L  +M     +   Y+E   P +++      +G    +  ++F  +  D+    
Sbjct: 170 ALMHRALSQFMLDLHTEQHGYQETYVPYLVNHASLYGTGQLPKFGEDLFHTRPLDEEAS- 228

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
              +AL P +      +    +     LP+++      +R+E         GL+R+  F 
Sbjct: 229 SSNYALIPTSEVPLTNLVRDEILEEESLPLKMTAHTPCFRSEAGAYGRDTRGLIRMHQFD 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI----MVKLSTRPEKRVGSDALWDD 443
           + +       E   +   ++      + +                    ++     +W  
Sbjct: 289 KVEMVHITRPEDSMDALEELVGHAEKVLQLLNLPYRKVLLCTGDMGFGAQKTYDLEVWLP 348

Query: 444 AENIMKGV 451
           A++  + +
Sbjct: 349 AQDTYREI 356


>gi|292487821|ref|YP_003530696.1| seryl-tRNA synthetase [Erwinia amylovora CFBP1430]
 gi|292899049|ref|YP_003538418.1| seryl-tRNA synthetase [Erwinia amylovora ATCC 49946]
 gi|291198897|emb|CBJ46007.1| seryl-tRNA synthetase [Erwinia amylovora ATCC 49946]
 gi|291553243|emb|CBA20288.1| Seryl-tRNA synthetase [Erwinia amylovora CFBP1430]
          Length = 430

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/188 (11%), Positives = 61/188 (32%), Gaps = 10/188 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
             + + L  +M     +   Y+E   P +++      +G    +  ++F  +  D+    
Sbjct: 170 ALMHRALSQFMLDLHTEQHGYQETYVPYLVNHASLYGTGQLPKFGEDLFHTRPLDEEAS- 228

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
              +AL P +      +    +     LP+++      +R+E         GL+R+  F 
Sbjct: 229 SSNYALIPTSEVPLTNLVRDEILEEESLPLKMTAHTPCFRSEAGAYGRDTRGLIRMHQFD 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI----MVKLSTRPEKRVGSDALWDD 443
           + +       E   +   ++      + +                    ++     +W  
Sbjct: 289 KVEMVHITRPEDSMDALEELVGHAEKVLQLLNLPYRKVLLCTGDMGFGAQKTYDLEVWLP 348

Query: 444 AENIMKGV 451
           A++  + +
Sbjct: 349 AQDTYREI 356


>gi|226328004|ref|ZP_03803522.1| hypothetical protein PROPEN_01895 [Proteus penneri ATCC 35198]
 gi|225203708|gb|EEG86062.1| hypothetical protein PROPEN_01895 [Proteus penneri ATCC 35198]
          Length = 427

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 68/433 (15%), Positives = 131/433 (30%), Gaps = 73/433 (16%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQV--LDQHLWQQSGHWDSYRANMFA 320
           G+  +     +++Q + + +++ +    + EI TP V              D     M+ 
Sbjct: 10  GMNDYLPADTRVWQKIENTLKQILAGYGFSEIRTPIVEHTPLFQRAIGEVTDVVEKEMYT 69

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
                +   D ++  L+P N  G V         Y +   RL   G ++R E        
Sbjct: 70  FTDRGE---DAQSLTLRPENTAGCVRAGIEHGLLYNQ-EQRLWYLGPMFRYERPQK---- 121

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
            R R F Q  A VF  +    +   ++  L    +K  G      +  T     +GS   
Sbjct: 122 GRYRQFHQLGAEVFGLQGPDIDA--ELIMLTARWWKALGIA----EHVTLELNSIGSLEA 175

Query: 441 WDDAENIMKGVLD------------------------------TIKNSSQDRINTGVLLG 470
                  +   L+                              T+ N + +  +      
Sbjct: 176 RAKYREALVAFLEQHVDKLDEDCKRRMYSNPLRVLDSKNPEIQTLLNDAPELFDYLDDES 235

Query: 471 EGAFYGPKFEYILKDAIG---RDWQCGTIQVDFNLPSRFNAFYVNSHSE----------- 516
              F G      L DA+G   R  Q     +D+   + F        S+           
Sbjct: 236 RAHFDGLC---ALLDAVGITYRVNQRLVRGLDYYNRTVFEWVTSALGSQGTVCAGGRYDG 292

Query: 517 -----KCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
                  HP        G +ER I ++++          +     + +    +   A  +
Sbjct: 293 LVKQLGGHPTPAVGFAMG-MERMI-LLVQAVNPEFVADTNVADVYLASFGEKSQSAALML 350

Query: 572 ANLLKSH--HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           A  ++     L + T+  N     ++     +   I +I G+ E +  ++ ++   S   
Sbjct: 351 AEEIRDQLPTLRLMTNHGNGNFKKQLGRADKQGAKIALILGEDEINAGTVAVKDLRSGEQ 410

Query: 630 QKVSLLDAIPILT 642
             V+  D    LT
Sbjct: 411 TIVARNDLAQQLT 423


>gi|315647593|ref|ZP_07900695.1| histidyl-tRNA synthetase [Paenibacillus vortex V453]
 gi|315277032|gb|EFU40373.1| histidyl-tRNA synthetase [Paenibacillus vortex V453]
          Length = 426

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 67/198 (33%), Gaps = 15/198 (7%)

Query: 446 NIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSR 505
            +++ +L  +        +  +  G   + G  +E        R    G          R
Sbjct: 242 QMLQDMLQRVGLEQDCVFDPFLSRGLSFYTGTVYEIFDVSGSYRSSLGGG--------GR 293

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAV 565
           ++A   +               FG         I     N P+  S  Q IV  I  +  
Sbjct: 294 YDAIIAHLVGRDDIAYPTVGLSFGMES------IMEMIRNRPMGTSKPQVIVIPIGDAIP 347

Query: 566 EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
           E  +  A +L++  L  E       +   + + S   IP +I+ G++EA+   + ++   
Sbjct: 348 EGLRA-AAVLRNQGLRTEFAHNGRKLKKTLSKASSDGIPYVILIGEEEAAAGQVRLKDMH 406

Query: 626 STTTQKVSLLDAIPILTK 643
             T  ++ L + +  + +
Sbjct: 407 ENTEVQMRLEEVVAFMKQ 424


>gi|323341643|ref|ZP_08081876.1| alanine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
 gi|322464068|gb|EFY09261.1| alanine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
          Length = 869

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/192 (20%), Positives = 79/192 (41%), Gaps = 19/192 (9%)

Query: 22  TGSDVAES--ISRSLAKKAV--AVAING----KVCDLSDPVREGSIEIITPEDPRSLAVI 73
           +G  VA++  I    AK  V      NG       D+   +  G +  +  +  R + + 
Sbjct: 498 SGGQVADTGTIESDSAKGKVLDVKKANGGQPLHFVDVDGTITMGQVFDLKIDAKRRILIR 557

Query: 74  -RHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFY-YDFDKEQPFSSDELAQIEKKMQEIIA 131
             HSC H++  A++S+  +     G  ++D ++ +DF   +  + ++L ++E  + + IA
Sbjct: 558 KNHSCVHLLHSALKSVVGDHVSQAGSYVDDNYFRFDFSHFEKVTDEQLEKVELMINQWIA 617

Query: 132 RDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE-WFDLCRGPHVRS 190
              P        E+A+ +            L S      V +   G+   +LC G H   
Sbjct: 618 ESLPITVVEKPLEEAKAMGAMA--------LFSENYGSVVRVVTMGDASMELCGGTHAHG 669

Query: 191 TGQVKKFFKLMK 202
           TG++  F  + +
Sbjct: 670 TGEIGVFKLVSE 681


>gi|148655020|ref|YP_001275225.1| glycyl-tRNA synthetase [Roseiflexus sp. RS-1]
 gi|148567130|gb|ABQ89275.1| glycyl-tRNA synthetase [Roseiflexus sp. RS-1]
          Length = 530

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 60/370 (16%), Positives = 120/370 (32%), Gaps = 70/370 (18%)

Query: 268 WHRKGWKIFQTLISYMRR---KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCA 324
           W   G ++   +IS   R     +DD E ++   ++++  W+ SGH +++   +   +  
Sbjct: 35  WGPLGVELKNNIISSWWRTNVYERDDMEGLDAAILMNRLTWRYSGHEETFNDPLVDCRDC 94

Query: 325 DDTIK-----------------DLRTF------------------ALKPMNCPGHVAVFN 349
               +                 + R F                   L+P    G    F 
Sbjct: 95  KSRWRADHIRGRCPNCGSTNLTEPRPFNMMFKTAVGPVADADSFAYLRPETAQGIFVNFG 154

Query: 350 HGL-KSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
           + L  S R+LP  +A+ G  +RNE +   + L RVR F Q +   F           +  
Sbjct: 155 NVLATSSRKLPFGIAQVGKAFRNEINPR-NFLFRVREFEQMEIEYFVMPGTEDEWHQRWL 213

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL 468
              ++ ++  G  +  +K+   P   +   A +      +     T+     + I +   
Sbjct: 214 EDRLAWWESIGIPRARIKIYDVPPDEL---AHYSKRTFDLMYDYPTLGYEEVEGIASRTD 270

Query: 469 LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
              G+            +  ++    T + + N  S     Y +  S +     +     
Sbjct: 271 YDLGSH-----------SRDQETLNLTARANPNRDSTARLTYYDPESRRHIVPFVIEPSA 319

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRN 588
           G    F+ ++ E +   +     P +    T           +   LKS         RN
Sbjct: 320 GVGRCFLAVLAEAYDEQMVKAPPPERVHAVT---------DALEAFLKSVG-------RN 363

Query: 589 ETINYKIREH 598
           E +  +IR+ 
Sbjct: 364 EKLASEIRDA 373



 Score = 42.8 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 14/99 (14%), Positives = 33/99 (33%), Gaps = 5/99 (5%)

Query: 548 LWLSPIQAIVTTITSSA---VEYAQEIANLLKS-HHLSIETDFRNETINYKIREHSIKKI 603
             L+PI+  V  +  +    V  A+E+   ++S        D     I    R       
Sbjct: 430 PHLAPIRVAVFPLKRNHEGLVAMARELRTAIQSGSSFRTVYDDTGA-IGKLYRRQDEIGT 488

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           P  +    +   + ++ +R   +    ++   +    +T
Sbjct: 489 PYCVTVDFQSLEDGTVTVRDRDTMQQVRIPASEVRAYVT 527


>gi|296133427|ref|YP_003640674.1| histidyl-tRNA synthetase [Thermincola sp. JR]
 gi|296032005|gb|ADG82773.1| histidyl-tRNA synthetase [Thermincola potens JR]
          Length = 419

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 62/417 (14%), Positives = 126/417 (30%), Gaps = 65/417 (15%)

Query: 273 WKIFQTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           W   + +I  + R+    Y EI TP        +          ++   +      K  R
Sbjct: 20  WHFLEKIIKEICREY--GYAEIRTPIF---EHTELFLRGVGDTTDVVEKEMYTFQDKGKR 74

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
           +  L+P      V  F       + LP+++   G ++R           R R F Q    
Sbjct: 75  SLTLRPEMTASAVRAFVEHKLYAQPLPIKVYYEGPMFRYAN----VQAGRYRQFHQFGVE 130

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEK----------IMVKLSTRPEKR---VGSDA 439
           VF + + + +   ++ ++ +  Y   G              + +   R E R    G   
Sbjct: 131 VFGSDDPVVDA--EVISMAMDFYNRLGLRDLELHINSVGCPVCRPKHREELRKFLAGKLD 188

Query: 440 ----------------LWDDAENIMKGVLD-----------------TIKNSSQDRINTG 466
                           + D  E   + V +                     +  D I   
Sbjct: 189 RLCALCRSRYDRNPMRILDCKEEACRLVSEGAPTTLSCLCDDCREHFEKVKNYLDAIGIE 248

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRA 526
            ++ +    G   +Y  K A          Q       R+N             +     
Sbjct: 249 YIIDDRLVRG--LDYYTKTAFEIMAADIGAQSSIGGGGRYNGLIEQVGGPPTPGIGFALG 306

Query: 527 VFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF 586
           +    ER +  M    +G      +     +  +   A   +  I ++L+   L+ E D 
Sbjct: 307 L----ERILATM--ERQGIEIPVENRCDIYLAPLGEEAKLKSFRILDILRRSGLAAEIDN 360

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            N ++  +++  +  K   ++I G+ E +     +R       ++++L + I  L K
Sbjct: 361 LNRSLKAQMKFANRLKAKYVVILGENELNRGIAAVRNMADGQQEEIALDELINYLKK 417


>gi|270261178|ref|ZP_06189451.1| seryl-tRNA synthetase [Serratia odorifera 4Rx13]
 gi|270044662|gb|EFA17753.1| seryl-tRNA synthetase [Serratia odorifera 4Rx13]
          Length = 430

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 60/188 (31%), Gaps = 10/188 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M     +   Y E   P +++      +G    +  ++F  K  ++   D
Sbjct: 170 ARMHRALSQFMLDLHTEQHGYLEAYVPYLVNHATLYGTGQLPKFGDDLFHTKPLEEE-SD 228

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
              +AL P        +    +     LP+++      +R E         GL+R+  F 
Sbjct: 229 SSNYALIPTAEVPLTNLVRDEILEEESLPLKMTAHTPCFRAEAGSYGRDTRGLIRMHQFD 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E       ++      + +        V L T              +W  
Sbjct: 289 KVEMVQIVRPEDSMAALEELTGHAEKVLQLLNLPYRKVLLCTGDMGFGACKTYDLEVWLP 348

Query: 444 AENIMKGV 451
           A++  + +
Sbjct: 349 AQDTYREI 356


>gi|218129700|ref|ZP_03458504.1| hypothetical protein BACEGG_01279 [Bacteroides eggerthii DSM 20697]
 gi|317475947|ref|ZP_07935202.1| seryl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA]
 gi|217988112|gb|EEC54436.1| hypothetical protein BACEGG_01279 [Bacteroides eggerthii DSM 20697]
 gi|316907879|gb|EFV29578.1| seryl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA]
          Length = 424

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 69/198 (34%), Gaps = 16/198 (8%)

Query: 245 DHRKLAREMDLFHIA----EDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQV 299
            H +LA++ DL          G+G   +  KG ++ + LI++ +    K  Y EI  P V
Sbjct: 143 PHWELAKKYDLIDFDLGVKITGAGFPVYKGKGAQLQRALINFFLDEARKSGYTEIMPPTV 202

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           ++            Y       K       ++    L P        ++   +   ++LP
Sbjct: 203 VNA--------ASGYGTGQLPDKEGQMYHCEVDDLYLIPTAEVPVTNIYRDVILDEKQLP 254

Query: 360 VRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ++   +   +R E       + GL R+  F++ +       E       ++ N +  + +
Sbjct: 255 IKNCAYTQCFRREAGSYGKDVRGLNRLHEFSKVELVRIDKPEHSKESHQEMLNHVEGLLQ 314

Query: 417 DFGFEKIMVKLSTRPEKR 434
                  +++L       
Sbjct: 315 KLELPYRILRLCGGDMSF 332


>gi|161486631|ref|NP_934118.2| seryl-tRNA synthetase [Vibrio vulnificus YJ016]
 gi|46577168|sp|Q7MLV2|SYS_VIBVY RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
          Length = 435

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 37/248 (14%), Positives = 82/248 (33%), Gaps = 16/248 (6%)

Query: 220 IYGTAWNTQQELTQYLY-FLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKG--WK 274
             G   N   E++++      + E +DH  L    D   F  A   +G  F   KG   +
Sbjct: 114 PNGKDENDNLEISRWGEPKSYDFELKDHVDLGEMGDGLDFASAVKITGARFIVMKGQFAR 173

Query: 275 IFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL- 331
           + + +  +M     +   Y E+  P +++      +G    +  ++F  +   +   D  
Sbjct: 174 LHRAIAQFMLDLHTEEHGYTEMYVPYLVNADSLFGTGQLPKFGKDLFHTEPLTEKASDEE 233

Query: 332 -RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
            R  +L P        +    +    +LP+++      +R+E         GL+R+  F 
Sbjct: 234 PRKLSLIPTAEVPVTNLVRDTISDEADLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFD 293

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI----MVKLSTRPEKRVGSDALWDD 443
           + +       E   N   ++      + +                     +     +W  
Sbjct: 294 KVELVQITKPEDSMNALEELTGHAEKVLQLLELPYRKVLLCTGDMGFGSHKTYDLEVWVP 353

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 354 AQNTYREI 361


>gi|27366222|ref|NP_761750.1| seryl-tRNA synthetase [Vibrio vulnificus CMCP6]
 gi|320156734|ref|YP_004189113.1| seryl-tRNA synthetase [Vibrio vulnificus MO6-24/O]
 gi|30173149|sp|Q8D8M6|SYS_VIBVU RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|27362422|gb|AAO11277.1| seryl-tRNA synthetase [Vibrio vulnificus CMCP6]
 gi|319932046|gb|ADV86910.1| seryl-tRNA synthetase [Vibrio vulnificus MO6-24/O]
          Length = 435

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 37/248 (14%), Positives = 82/248 (33%), Gaps = 16/248 (6%)

Query: 220 IYGTAWNTQQELTQYLY-FLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKG--WK 274
             G   N   E++++      + E +DH  L    D   F  A   +G  F   KG   +
Sbjct: 114 PNGKDENDNLEISRWGEPKSYDFELKDHVDLGEMGDGLDFASAVKITGARFIVMKGQFAR 173

Query: 275 IFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL- 331
           + + +  +M     +   Y E+  P +++      +G    +  ++F  +   +   D  
Sbjct: 174 LHRAIAQFMLDLHTEEHGYTEMYVPYLVNADSLFGTGQLPKFGKDLFHTEPLTEKASDEE 233

Query: 332 -RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
            R  +L P        +    +    +LP+++      +R+E         GL+R+  F 
Sbjct: 234 PRKLSLIPTAEVPVTNLVRDTISDEADLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFD 293

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI----MVKLSTRPEKRVGSDALWDD 443
           + +       E   N   ++      + +                     +     +W  
Sbjct: 294 KVELVQITKPEDSMNALEELTGHAEKVLQLLELPYRKVLLCTGDMGFGSHKTYDLEVWVP 353

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 354 AQNTYREI 361


>gi|229076032|ref|ZP_04209003.1| Histidyl-tRNA synthetase 2 [Bacillus cereus Rock4-18]
 gi|228707066|gb|EEL59268.1| Histidyl-tRNA synthetase 2 [Bacillus cereus Rock4-18]
          Length = 476

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 73/465 (15%), Positives = 149/465 (32%), Gaps = 64/465 (13%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWK--------IFQTLISY 282
              Y   +   +  +       + L    E+   +     +G +        ++Q +   
Sbjct: 21  HHGYNTLVPTVQTVEAGVFLFLLRLKQFEEEL-NMSIQIPRGTQDILPGTVELWQYIEGQ 79

Query: 283 MRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPM-N 340
            R   +  +Y+EI TP        +          ++   +      +  R+  L+P   
Sbjct: 80  AREICRRYNYKEIRTPIF---EHTELFLRGVGDTTDIVQKEMYSFQDRGERSLTLRPEGT 136

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
            P   +   + +      P +L   G ++R E   +     R R F Q       + +  
Sbjct: 137 APVVRSYVENKMFGDATQPTKLYYIGQMFRYERPQA----GRYRQFVQFGIEAIGSNDPA 192

Query: 401 FNECLKIHNLIISIYKDFGFEKI---MVKLSTRPEKRVGSDALWDDAENIMKG------- 450
            +   ++  L +  Y+  G + I   +  L     ++   DAL    E  +         
Sbjct: 193 IDA--EVIALAVEFYRGMGLKNIKVVLNSLGDAASRQAHRDALIAHFEPRIGEFCSDCQS 250

Query: 451 --------VLDTIKNSSQDRINT-----GVLLGEGAFYGPK-----------FEYILKDA 486
                   +LD  K+ + + + T       L  + A Y  K           FE      
Sbjct: 251 RLEKNPLRILDCKKDRNHELMGTAPSITEYLNEDSAVYYDKVQELLTMMDVPFEKDPNLV 310

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHS--------EKCHPVMIHRAVFGSIERFIGIM 538
            G D+   T+    +    F A    S          E   P M       SIER I  +
Sbjct: 311 RGLDYYQHTVFEIMSEAEGFGAITTLSGGGRYNGLVQEIGGPEMPGIGFAMSIERLIMAL 370

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
            +     LP+    I   V  +   A ++A ++A  L+   L +E D+ +  +  + +  
Sbjct: 371 -KAENIELPIE-HSIDCYVVALGEKAKDHAAKVAFDLRKAGLLVEKDYLDRKMKAQFKSA 428

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
                  + + G+ E  +  I ++   +   ++V+L      + +
Sbjct: 429 DRLNAKFVAVLGEDELDKGIINLKDMATGGQEEVALDVFASYVAE 473


>gi|145632173|ref|ZP_01787908.1| alanyl-tRNA synthetase [Haemophilus influenzae 3655]
 gi|144987080|gb|EDJ93610.1| alanyl-tRNA synthetase [Haemophilus influenzae 3655]
          Length = 874

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 45/229 (19%), Positives = 87/229 (37%), Gaps = 36/229 (15%)

Query: 3   SDIKLT--FPDG-SIKNFPVHATGSDVAE----------SISRSLAKKAVAVAIN----- 44
           S  K+T  F DG S+++     +   + E           I  S    A  V  N     
Sbjct: 465 SQAKITALFYDGKSVESIEAGQSAVVILENTPFYAESGGQIGDSGYLSAQGVTFNVKDTQ 524

Query: 45  --GKVCDLSDPVREGSIEI------ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAI 96
             G+V      + +GS+++      I     R    + HS  H++  A++ I     V  
Sbjct: 525 KYGQVFGHIGELTQGSLKVGQSVNAIVDAKRRHNTSLNHSATHLLHAALRQILGLHVVQK 584

Query: 97  GPIIEDG-FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKE 155
           G ++ D    +DF + +  + ++L++IE  + + I  + P     +  + A+        
Sbjct: 585 GSLVSDKALRFDFAQPEAITKEQLSEIETLVNQKILANFPVQTDIMDIDSAKAKGAMALF 644

Query: 156 AYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKFFKLMKV 203
             K          + V +   G++  +LC G H + TG +  F  + + 
Sbjct: 645 GEKY--------GDKVRVLTMGDFSIELCGGIHAKRTGDIGLFKIITEN 685


>gi|317403428|gb|EFV83940.1| alanyl-tRNA synthetase [Achromobacter xylosoxidans C54]
          Length = 874

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/131 (22%), Positives = 60/131 (45%), Gaps = 9/131 (6%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKM 126
           R+  V  HS  H+M +A++ +        G +++ D   +DF ++ P +++++A++E  +
Sbjct: 555 RARTVRNHSATHLMHKALRQVLGAHVQQRGSLVDPDKTRFDFAQDAPLTAEQIARVEAIV 614

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGP 186
              I  + P + Q ++++ A +         K          + V +   G   +LC G 
Sbjct: 615 NAEILANQPTVAQVMAYDDAVKGGAMALFGEKY--------GDTVRVLDIGFSRELCGGT 666

Query: 187 HVRSTGQVKKF 197
           HV  TG +  F
Sbjct: 667 HVGRTGDIGLF 677


>gi|240949596|ref|ZP_04753931.1| alanyl-tRNA synthetase [Actinobacillus minor NM305]
 gi|240295854|gb|EER46530.1| alanyl-tRNA synthetase [Actinobacillus minor NM305]
          Length = 874

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 55/132 (41%), Gaps = 10/132 (7%)

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIA 131
           + HS  H++  A++ +     +  G  + E G  +DF + +  + ++L +IE+ +   I 
Sbjct: 561 LNHSATHLLHSALRKVLGSHVMQKGSLVNEKGLRFDFSQPEAITKEQLEEIERIVNAKIR 620

Query: 132 RDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRS 190
            +   + + +  E+A+          K          + V +     +  +LC G HV+ 
Sbjct: 621 ENIQVVIEEMGIEEAKAKGAMALFGEKY--------GDIVRVVDMSVFSIELCGGTHVKR 672

Query: 191 TGQVKKFFKLMK 202
           TG +  F    +
Sbjct: 673 TGDIGLFKLTSE 684


>gi|331269730|ref|YP_004396222.1| alanyl-tRNA synthetase [Clostridium botulinum BKT015925]
 gi|329126280|gb|AEB76225.1| alanyl-tRNA synthetase [Clostridium botulinum BKT015925]
          Length = 879

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 58/133 (43%), Gaps = 10/133 (7%)

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIAR 132
            HS  H++  A++ +  +     G  + ED   +DF   +  + +EL ++E  + ++I++
Sbjct: 565 NHSTTHLLHAALRKVLGDHVHQSGSYVDEDKLRFDFTHFEGVTQEELTKVEDLVNDVISK 624

Query: 133 DSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRST 191
                   ++ E+AR+         K          + V + + G +  +LC G H+ + 
Sbjct: 625 VYEVETNEMTIEEARQSGAMALFDEKY--------GDKVRVVKMGNFSVELCGGTHISNI 676

Query: 192 GQVKKFFKLMKVA 204
           G++  F  + +  
Sbjct: 677 GKIGLFKIVSESG 689


>gi|168182642|ref|ZP_02617306.1| alanine--tRNA ligase [Clostridium botulinum Bf]
 gi|237796002|ref|YP_002863554.1| alanyl-tRNA synthetase [Clostridium botulinum Ba4 str. 657]
 gi|182674085|gb|EDT86046.1| alanine--tRNA ligase [Clostridium botulinum Bf]
 gi|229262453|gb|ACQ53486.1| alanine--tRNA ligase [Clostridium botulinum Ba4 str. 657]
          Length = 879

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 39/172 (22%), Positives = 75/172 (43%), Gaps = 23/172 (13%)

Query: 35  AKKAVAVAI-------NGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQS 87
            KK ++  I       +GKV        E  + +   E+ R+     H+  HI+  A+  
Sbjct: 525 CKKNISGKILHFVKILDGKVA------LEDQVILKVNEERRNNIRKNHTATHILHAALIK 578

Query: 88  IWPEVQVAIGPIIEDG-FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKA 146
           +  +     G  ++D    +DF   +  S DEL ++EK + + I + +    + ++ E+A
Sbjct: 579 VVGDHVQQSGSYVDDERLRFDFSHFEAVSEDELKEVEKIVNKEIMKANAVNTKVMNIEEA 638

Query: 147 RELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
           +E             L     K++V +   G++  +LC G HV ++GQ+  F
Sbjct: 639 KE--------QGAIALFDNKYKDDVRVVSVGDFSKELCGGTHVSNSGQIGMF 682


>gi|295115136|emb|CBL35983.1| hypothetical protein [butyrate-producing bacterium SM4/1]
          Length = 90

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 32/77 (41%), Gaps = 1/77 (1%)

Query: 12 GSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSL 70
          G  + +P     S +A      ++   + V  NG++ +LS  ++ +  I +IT  D    
Sbjct: 8  GERREYPEGTPYSAIAADFREKVSHDILLVRANGRLRELSKKLKGDCEISLITAADREGW 67

Query: 71 AVIRHSCAHIMAEAVQS 87
             + S   +M +A   
Sbjct: 68 QTYQRSAVFLMLKAFYD 84


>gi|304316715|ref|YP_003851860.1| alanyl-tRNA synthetase [Thermoanaerobacterium thermosaccharolyticum
           DSM 571]
 gi|302778217|gb|ADL68776.1| alanyl-tRNA synthetase [Thermoanaerobacterium thermosaccharolyticum
           DSM 571]
          Length = 879

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/149 (17%), Positives = 57/149 (38%), Gaps = 8/149 (5%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFS 115
            ++E +  E  R      H+  H++  A++    +     G  +  +   +DF   Q  +
Sbjct: 546 DTVEALIDEKNRLSTARNHTATHLLHSALRKFIGDHVHQAGSLVTPERLRFDFTHYQALT 605

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            +E+  IE ++ E I  +       +SH++A +          + + +         +  
Sbjct: 606 DEEIKTIENEVNEKIYENIDVSVDIMSHDEALKKGA-------MALFQEKYGDVVRVVNV 658

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLMKVA 204
                +LC G HV +TG +  F  + +  
Sbjct: 659 SDYSKELCGGTHVDNTGNIGVFKIISESG 687


>gi|168484053|ref|ZP_02709005.1| histidyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
 gi|172042675|gb|EDT50721.1| histidyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
 gi|332198735|gb|EGJ12817.1| histidyl-tRNA synthetase [Streptococcus pneumoniae GA47368]
          Length = 429

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 60/404 (14%), Positives = 126/404 (31%), Gaps = 56/404 (13%)

Query: 276 FQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           +Q +  + R   K  +Y E+ TP       ++          ++   +  D   K  R  
Sbjct: 20  WQYVEGFAREIFKRYNYAEVRTPIF---EHYEVISRSVGDTTDIVTKEMYDFYDKGDRHI 76

Query: 335 ALKPMNCPGHVAVFNHGLKS-----YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
            L+P    G   V    +++       + P +    G ++R E   +     R+R F Q 
Sbjct: 77  TLRP---EGTAPVVRSYVENKLFAPEVQKPSKFYYMGPMFRYERPQA----GRLRQFHQI 129

Query: 390 DAHVFCTKEQM-FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWD------ 442
               F +       E + +    +      G +  +  L     +     AL D      
Sbjct: 130 GVECFGSSNPATDVETIVMAAHFLKEIGIQGVKLHLNTLGNPESRAAYRQALIDYLTPLK 189

Query: 443 -----DAENIMKG----VLDTIKNSSQDR-------INTGVLLGEGAFYGPK-------F 479
                D++  ++     VLD+ +   +         ++      +  F   +        
Sbjct: 190 ETLSKDSQRRLEENPLRVLDSKEKEDKVAVENAPSILDFLDEESQAHFDAVRQMLENLGV 249

Query: 480 EYILKDAI--GRDWQCGTIQVDFNLPSRFNAFYVN---SHSEKCHPVMIHRAVFG---SI 531
           +YI+   +  G D+   TI          +              +      A FG    +
Sbjct: 250 DYIIDTNMVRGLDYYNHTIFEFITEIEGNDLTVCAGGRYDGLVAYFGGPETAGFGFGLGV 309

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           ER + I+    +G      + +   +  +   A   A E+   L+      E D+ N  +
Sbjct: 310 ERLLLIL--EKQGVALPIENALDVYIAVLGDGANVKALELVQALRQQGFKAERDYLNRKL 367

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
             + +   +     +I  G+ E     + ++   +    +VSL 
Sbjct: 368 KAQFKSADVFAAKTLITLGESEVESGQVTVKNNQTREEVQVSLE 411


>gi|149912410|ref|ZP_01900953.1| threonyl-tRNA synthetase [Moritella sp. PE36]
 gi|149804513|gb|EDM64602.1| threonyl-tRNA synthetase [Moritella sp. PE36]
          Length = 55

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 17/41 (41%)

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           P +++ GDKE     I +R         + L D I  L  E
Sbjct: 2   PYLLVIGDKEVESGEIAVRTRKGVDLGTMKLDDFISKLQIE 42


>gi|295106322|emb|CBL03865.1| seryl-tRNA synthetase [Gordonibacter pamelaeae 7-10-1-b]
          Length = 429

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 64/189 (33%), Gaps = 17/189 (8%)

Query: 271 KGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
            G ++ + LI++M        Y+E   P + +      +G    +  ++F          
Sbjct: 173 LGARLERALINFMADTHASRGYKEWWCPAMANAETLTGTGQLPKFEEDLFHTT------- 225

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGF 386
                 L P        +    +    +LP++   F   +R E   +     GL+RV  F
Sbjct: 226 --EGLYLIPTAEVQLTNIHAGEVLDAGQLPLKYCAFTPCFREEAGSAGRDTRGLIRVHQF 283

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWD 442
            + +   +   E+ F++   +     +I +  G    ++ L T              +W 
Sbjct: 284 DKVEMVKYAKPEESFDDLEAMVADAENILQLLGLPYRVISLCTGDIGFSAAKTYDLEVWL 343

Query: 443 DAENIMKGV 451
            + N  K +
Sbjct: 344 PSYNGYKEI 352


>gi|205830264|sp|A9M198|SYA_NEIM0 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
          Length = 874

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 61/143 (42%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFS 115
            S+     ++ R+  +  HS  H+M +A++ +        G  +  +   +D    Q  +
Sbjct: 544 DSVTAKVDDEIRNANMRNHSATHLMHKALRDVLGGHVEQKGSLVTAESTRFDISHPQAVT 603

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           ++E+A++E+++ E +  +       +S E A++         K          E V + +
Sbjct: 604 AEEIAEVERRVNEAVLANVAVNAAIMSMEDAQKTGAMMLFGEKY--------GEEVRVLQ 655

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G +  +LC G HV  TG +  F
Sbjct: 656 MGGFSTELCGGTHVSRTGDIGLF 678


>gi|218768564|ref|YP_002343076.1| alanyl-tRNA synthetase [Neisseria meningitidis Z2491]
 gi|20532265|sp|Q9JTG4|SYA_NEIMA RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|121052572|emb|CAM08912.1| alanyl-tRNA synthetase [Neisseria meningitidis Z2491]
          Length = 874

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 61/143 (42%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFS 115
            S+     ++ R+  +  HS  H+M +A++ +        G  +  +   +D    Q  +
Sbjct: 544 DSVTAKVDDEIRNANMRNHSATHLMHKALRDVLGGHVEQKGSLVTAESTRFDISHPQAVT 603

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           ++E+A++E+++ E +  +       +S E A++         K          E V + +
Sbjct: 604 AEEIAEVERRVNEAVLANVAVNAAIMSMEDAQKTGAMMLFGEKY--------GEEVRVLQ 655

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G +  +LC G HV  TG +  F
Sbjct: 656 MGGFSTELCGGTHVSRTGDIGLF 678


>gi|296162244|ref|ZP_06845039.1| seryl-tRNA synthetase [Burkholderia sp. Ch1-1]
 gi|295887511|gb|EFG67334.1| seryl-tRNA synthetase [Burkholderia sp. Ch1-1]
          Length = 431

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 75/222 (33%), Gaps = 14/222 (6%)

Query: 242 EKRDHRKLAREMDL-FHIAEDGSGVIFWHRKG--WKIFQTLISYMRRKI--KDDYEEINT 296
           E +DH  +   + L F      SG  F   +G   ++ + L  +M         Y EI T
Sbjct: 135 EVKDHVDVGAPLGLDFETGAKLSGARFTMLRGQIARLHRALAQFMIDTHTQHHGYTEIYT 194

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +++  +   +G    +  +MF V+   D     +       +           +    
Sbjct: 195 PYIVNPEILYGTGQLPKFADDMFRVERGGDENTVTQYLIS--TSEISLTNTVRDSIVEAD 252

Query: 357 ELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
            LP++L      +R+E         GL+R   F + +       E  ++   ++     +
Sbjct: 253 ALPIKLTAHSPCFRSEAGSYGRDTRGLIRQHQFDKVEMVQIVAPETSYDALEQMVGHAET 312

Query: 414 IYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
           I +       ++ L T              +W  A+N  + +
Sbjct: 313 ILQKLELPYRVITLCTGDMGFSAAKTYDLEVWVPAQNTYREI 354


>gi|325136739|gb|EGC59339.1| alanyl-tRNA synthetase [Neisseria meningitidis M0579]
 gi|325201730|gb|ADY97184.1| alanyl-tRNA synthetase [Neisseria meningitidis M01-240149]
 gi|325208526|gb|ADZ03978.1| alanyl-tRNA synthetase [Neisseria meningitidis NZ-05/33]
          Length = 989

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 61/143 (42%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFS 115
            S+     ++ R+  +  HS  H+M +A++ +        G  +  +   +D    Q  +
Sbjct: 659 DSVTAKVDDEIRNANMRNHSATHLMHKALRDVLGGHVEQKGSLVTAESTRFDISHPQAVT 718

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           ++E+A++E+++ E +  +       +S E A++         K          E V + +
Sbjct: 719 AEEIAEVERRVNEAVLANVAVNAAIMSMEDAQKTGAMMLFGEKY--------GEEVRVLQ 770

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G +  +LC G HV  TG +  F
Sbjct: 771 MGGFSTELCGGTHVSRTGDIGLF 793


>gi|206602304|gb|EDZ38785.1| Alanyl-tRNA synthetase [Leptospirillum sp. Group II '5-way CG']
          Length = 891

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 40/186 (21%), Positives = 73/186 (39%), Gaps = 33/186 (17%)

Query: 12  GSIKNFPVHATGSDVAESISRSLAKKAVAVAIN-GKVCDLSDPVREGSIEIITPEDPRSL 70
           G+ K +P               LA + V+  ++ G+  D          + +  E  +  
Sbjct: 523 GAKKPYPGWIV-----------LAGEVVSGKVSVGETID----------QHVDEEARQGS 561

Query: 71  AVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
               H+  H++  A++++  E     G  +  +   +DF   QP S + L  +E  +   
Sbjct: 562 E-RHHTATHLLHAALRTVLGEQVRQAGSLVAPERLRFDFTCPQPVSPENLLAVEALVNGW 620

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ-GEWFDLCRGPHV 188
           I R+SP   + +   KA ++        K          + V + +  G   +LC G HV
Sbjct: 621 IFRNSPVDAREMEKSKALDMGALAFFDEKY--------GDRVRVVQVPGTSVELCGGTHV 672

Query: 189 RSTGQV 194
           RSTGQ+
Sbjct: 673 RSTGQI 678


>gi|205355365|ref|ZP_03222136.1| alanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8421]
 gi|205346599|gb|EDZ33231.1| alanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8421]
          Length = 842

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/142 (22%), Positives = 63/142 (44%), Gaps = 9/142 (6%)

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQI 122
             + R      HS  H++  A++ I        G ++E +   +DF   +  + +EL  I
Sbjct: 538 DTEKREQIARHHSATHLLHHALREILGSHVSQAGSLVESNKLRFDFTHHKALNKEELESI 597

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK++ ++I   S  + + +  E+A++         K +         NV +   GE  +L
Sbjct: 598 EKRVNKMIINSSEAILENMPLEEAKKSGAIALFNEKYQ--------GNVRVLTLGESKEL 649

Query: 183 CRGPHVRSTGQVKKFFKLMKVA 204
           C G HV++T Q+  F+ + +  
Sbjct: 650 CGGTHVKNTAQIGSFYIVKESG 671


>gi|86148968|ref|ZP_01067200.1| alanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|88597061|ref|ZP_01100297.1| alanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 84-25]
 gi|218562159|ref|YP_002343938.1| alanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|20532267|sp|Q9PI05|SYA_CAMJE RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|85840326|gb|EAQ57583.1| alanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|88190750|gb|EAQ94723.1| alanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 84-25]
 gi|112359865|emb|CAL34653.1| alanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|315927005|gb|EFV06360.1| alanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           DFVF1099]
          Length = 842

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/142 (22%), Positives = 63/142 (44%), Gaps = 9/142 (6%)

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQI 122
             + R      HS  H++  A++ I        G ++E +   +DF   +  + +EL  I
Sbjct: 538 DTEKREQIARHHSATHLLHHALREILGSHVSQAGSLVESNKLRFDFTHHKALNKEELESI 597

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK++ ++I   S  + + +  E+A++         K +         NV +   GE  +L
Sbjct: 598 EKRVNKMIINSSEAILENMPLEEAKKSGAIALFNEKYQ--------GNVRVLTLGESKEL 649

Query: 183 CRGPHVRSTGQVKKFFKLMKVA 204
           C G HV++T Q+  F+ + +  
Sbjct: 650 CGGTHVKNTAQIGSFYIVKESG 671


>gi|312889997|ref|ZP_07749541.1| histidyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603]
 gi|311297529|gb|EFQ74654.1| histidyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603]
          Length = 458

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 15/91 (16%), Positives = 35/91 (38%)

Query: 553 IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
            Q ++    +    YA      L+S  +  E       +  ++   + K+IP +I+ G  
Sbjct: 367 TQVLICCFDNDGETYALPFLQELRSREIRSELYPAGSKMKKQLDYANAKQIPYVIVIGSD 426

Query: 613 EASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           E     +  +   +   +K+S    + +L +
Sbjct: 427 EMESGLLSFKNMLTGDQEKLSTEMIVAMLAE 457


>gi|284925772|gb|ADC28124.1| alanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni IA3902]
          Length = 842

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/142 (22%), Positives = 63/142 (44%), Gaps = 9/142 (6%)

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQI 122
             + R      HS  H++  A++ I        G ++E +   +DF   +  + +EL  I
Sbjct: 538 DTEKREQIARHHSATHLLHHALREILGSHVSQAGSLVESNKLRFDFTHHKALNKEELESI 597

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK++ ++I   S  + + +  E+A++         K +         NV +   GE  +L
Sbjct: 598 EKRVNKMIINSSEAILENMPLEEAKKSGAIALFNEKYQ--------GNVRVLTLGESKEL 649

Query: 183 CRGPHVRSTGQVKKFFKLMKVA 204
           C G HV++T Q+  F+ + +  
Sbjct: 650 CGGTHVKNTAQIGSFYIVKESG 671


>gi|57238291|ref|YP_178628.1| alanyl-tRNA synthetase [Campylobacter jejuni RM1221]
 gi|148925880|ref|ZP_01809567.1| alanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8486]
 gi|73621968|sp|Q5HVQ7|SYA_CAMJR RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|57167095|gb|AAW35874.1| alanyl-tRNA synthetase [Campylobacter jejuni RM1221]
 gi|145844866|gb|EDK21970.1| alanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8486]
 gi|315057927|gb|ADT72256.1| Alanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni S3]
          Length = 842

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/142 (22%), Positives = 63/142 (44%), Gaps = 9/142 (6%)

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQI 122
             + R      HS  H++  A++ I        G ++E +   +DF   +  + +EL  I
Sbjct: 538 DTEKREQIARHHSATHLLHHALREILGSHVSQAGSLVESNKLRFDFTHHKALNKEELESI 597

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK++ ++I   S  + + +  E+A++         K +         NV +   GE  +L
Sbjct: 598 EKRVNKMIINSSEAILENMPLEEAKKSGAIALFNEKYQ--------GNVRVLTLGESKEL 649

Query: 183 CRGPHVRSTGQVKKFFKLMKVA 204
           C G HV++T Q+  F+ + +  
Sbjct: 650 CGGTHVKNTAQIGSFYIVKESG 671


>gi|262527560|sp|B1HUK4|SYA_LYSSC RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
          Length = 908

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/144 (21%), Positives = 64/144 (44%), Gaps = 10/144 (6%)

Query: 56  EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPF 114
           E +++ I   D R+L +  H+  HIM  A++ +  +     G  +  D   +DF      
Sbjct: 577 EDAVQAIVHRDDRNLIIKNHTATHIMQRALKDVLGDHVNQAGSYVGPDRLRFDFSHFGQV 636

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
           + +EL QIE+ + E +  D   + + ++ ++A+          K          + V + 
Sbjct: 637 TKEELQQIERIVNEKVWDDIEVVIEEMAIDQAKAKGAMALFGEKY--------GDVVRVV 688

Query: 175 RQGEW-FDLCRGPHVRSTGQVKKF 197
             G++  +LC G HV+ + ++  F
Sbjct: 689 SIGDYSIELCGGIHVKRSSEIGFF 712


>gi|238753493|ref|ZP_04614856.1| Seryl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
 gi|238708446|gb|EEQ00801.1| Seryl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
          Length = 431

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 61/188 (32%), Gaps = 10/188 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M     +   Y E   P +++      +G    +  ++F  K  D+    
Sbjct: 170 ARMHRALAQFMLDLHTEKHGYLETYVPYLVNHATLYGTGQLPKFGGDLFHTKPLDEESA- 228

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
              +AL P        +    +     LP+++      +R+E         GL+R+  F 
Sbjct: 229 SSNYALIPTAEVPVTNLVRDEILEEESLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFD 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E       ++      + +  G     + L T              +W  
Sbjct: 289 KVELVQIVRPEDSTEALEELTGHAEKVLQLLGLPYRKMLLCTGDMGFGSRKTYDLEVWLP 348

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 349 AQNTYREI 356


>gi|298530167|ref|ZP_07017569.1| seryl-tRNA synthetase [Desulfonatronospira thiodismutans ASO3-1]
 gi|298509541|gb|EFI33445.1| seryl-tRNA synthetase [Desulfonatronospira thiodismutans ASO3-1]
          Length = 425

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 55/354 (15%), Positives = 112/354 (31%), Gaps = 35/354 (9%)

Query: 109 DKEQPFSSDELAQIEKKMQEIIA--RDSPFLKQYLSHEKARELFESKKEAYKVEILESIP 166
           D+      D+  ++E++ +E+    +D    +   S E A    E +  A  +E L  + 
Sbjct: 20  DRGAAQDLDDFLKLEQQRRELTQRVQDLKTRRNQASQEVALAKREGRDAAQAMEGLSELS 79

Query: 167 AKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWN 226
            K        GE   L R  H             + V       D +   + R +G    
Sbjct: 80  DK---IKELDGELKGLDRQVHEWLLSVPNIPAGDVPVGS-----DEDDNQVVRTWGEKPV 131

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
              +  ++     E    D    A+      +   G     W   G ++ + LI++M   
Sbjct: 132 MDFQPREHWDLGVELGGLDFEHAAKMTGSRFVMYVG-----W---GARLERALINFMLDV 183

Query: 287 I--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
              +  Y E   P ++++     +G    +  ++F +        +   + L P      
Sbjct: 184 QTGEHGYMETMPPMIVNRDSMTATGQLPKFADDLFKL--------ENWEYYLIPTAEVPL 235

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMF 401
             +    +    +LP+    F   +R+E         G++R   F + +   F   +  F
Sbjct: 236 TNIHRGEVLQEDQLPLAYTAFTGCFRSEAGSHGKDTRGIIRQHQFNKVELVRFAHPDDSF 295

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
            +   +      I K  G    +V L T              +W   +   + +
Sbjct: 296 KQLELLLGHAEEILKRLGLHYRVVNLCTGDLGFGAAKTYDIEVWLPGQGKYREI 349


>gi|50122289|ref|YP_051456.1| alanyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
 gi|59798525|sp|Q6D1T0|SYA_ERWCT RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|49612815|emb|CAG76265.1| alanyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
          Length = 875

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/151 (17%), Positives = 57/151 (37%), Gaps = 10/151 (6%)

Query: 56  EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGF-YYDFDKEQPF 114
             S++       R    + HS  H++  A++ +        G ++ D +  +DF   +  
Sbjct: 545 NDSVDANVDSQRRDRIRLNHSATHLLHAALRQVLGVHVAQKGSLVNDSYLRFDFSHTEAM 604

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
             +++ Q+E  +   I R+       ++ + AR          K          ++V + 
Sbjct: 605 KPEQIRQVEDIVNAQIRRNLTVQTDVMALDDARAKGAMALFGEKY--------DDHVRVL 656

Query: 175 RQGEW-FDLCRGPHVRSTGQVKKFFKLMKVA 204
             G++  +LC G H   TG +  F  + +  
Sbjct: 657 SMGDFSIELCGGTHASRTGDIGLFQIISESG 687


>gi|14601532|ref|NP_148072.1| glycyl-tRNA synthetase [Aeropyrum pernix K1]
 gi|11387160|sp|Q9YBF8|SYG_AERPE RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|5105327|dbj|BAA80640.1| glycyl-tRNA synthetase [Aeropyrum pernix K1]
          Length = 583

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 14/101 (13%), Positives = 37/101 (36%), Gaps = 4/101 (3%)

Query: 546 LPLWLSPIQAIVTT---ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
            P  ++P+QA+V          VE A+ +   L     ++  D    +I  +        
Sbjct: 467 FPRDIAPVQAVVLPLVENDEKLVERARMVYETLVEAGFTVYYDDSG-SIGRRYARADEIG 525

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +P  +    +   + ++ +R   +    ++   + +  L +
Sbjct: 526 VPAAVTIDYQTLEDGTVTLRDRDTWRQVRIGADEVVDKLRR 566



 Score = 50.6 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/253 (15%), Positives = 73/253 (28%), Gaps = 66/253 (26%)

Query: 248 KLAREMDLFHIAEDGSG----VIFWHRKGWKIFQTLISYMRRKIKDDYE----EINTPQV 299
           ++ +    F  + +  G       W   G  + + +I   RR     ++    EI TP +
Sbjct: 11  EIGKRRGFFWPSYEIYGGVAGFYDWGPLGHLLKRRIIEKWRRYFVLMHQDHVVEIETPVI 70

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKD--------------------LRTFALKPM 339
             + ++  SGH + +   +        T +                      R    + +
Sbjct: 71  GPEKVYIASGHVEHFTDPIVRCTSCGRTFRADHLVEEALGINAEGLSVSELDRIIRERGL 130

Query: 340 NCPG----------HVAVFNHGLKSY---------------------------RELPVRL 362
            CP              +F   +  Y                             +P+ +
Sbjct: 131 RCPVCQGELGRVETFNLLFRTQIGPYEGSVGYLRPELAQGIFVAFKRVYEAMRSRIPLGI 190

Query: 363 AEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           A+ G V RNE S     L+R+R FT  +   F   E  +  C   H +  S      +E 
Sbjct: 191 AQVGRVGRNEISPR-QALVRLREFTIMEMEYFIDPEDQWGSCPFFHRMADSKLPILTYEA 249

Query: 423 IMVKLSTRPEKRV 435
                      ++
Sbjct: 250 KRRGEEKPESFKL 262


>gi|310639562|ref|YP_003944320.1| seryl tRNA synthetase [Paenibacillus polymyxa SC2]
 gi|309244512|gb|ADO54079.1| Seryl tRNA synthetase [Paenibacillus polymyxa SC2]
          Length = 427

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 83/234 (35%), Gaps = 22/234 (9%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIF 276
           G +     E+ ++    E S   + H +LA+++D+          GS   F+   G ++ 
Sbjct: 115 GASEEDNVEIRRWSEPREFSFTPKAHWELAQDLDILDFEAAAKVTGSRFTFYKGLGARLE 174

Query: 277 QTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           + LI++M      +  YEE+  P ++++     +G    +  ++F ++           +
Sbjct: 175 RALINFMMDLHSSEHGYEEMLPPYIVNRDSLYGTGQLPKFEEDLFKLRD--------TEY 226

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDA 391
            L P             + +  +LP     + S +R+E   +     GL+R   F + + 
Sbjct: 227 YLIPTAEVPVTNYHREEIMNADQLPKYYVAYSSCFRSEAGSAGRDTRGLIRQHQFNKVEM 286

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKI----MVKLSTRPEKRVGSDALW 441
                 +  + E  K+ N    + +  G                  +     +W
Sbjct: 287 LKLVHPDTSYEELEKMTNNAERVLQLLGLPYRVLALCTGDMGFTSAKTYDLEVW 340


>gi|331270693|ref|YP_004397185.1| serine--tRNA ligase [Clostridium botulinum BKT015925]
 gi|329127243|gb|AEB77188.1| serine--tRNA ligase [Clostridium botulinum BKT015925]
          Length = 426

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 68/180 (37%), Gaps = 17/180 (9%)

Query: 271 KGWKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTI 328
            G ++ + +I+Y          Y EI  P ++++     +G    +  + F V       
Sbjct: 171 LGARLERAIINYFLDMHTIDHGYTEILPPYMVNRESMTGTGQLPKFEEDAFKV------- 223

Query: 329 KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRG 385
            +   + L P        ++ + + +  ELP++ A + + +R E   +     GL+R   
Sbjct: 224 -ENNGYFLIPTAEVPVTNMYRNEILNGEELPIKHAAYSACFRAEAGSAGRDTRGLVRQHQ 282

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALW 441
           F + +   F   EQ ++E  K+ N    + K  G    +V++                +W
Sbjct: 283 FNKVELVKFVKPEQSYDELEKLTNDAEDVLKGLGLPYRVVRICKGDLGFTAALKYDIEVW 342


>gi|307710978|ref|ZP_07647401.1| histidyl-tRNA synthetase [Streptococcus mitis SK321]
 gi|307617218|gb|EFN96395.1| histidyl-tRNA synthetase [Streptococcus mitis SK321]
          Length = 426

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 60/404 (14%), Positives = 126/404 (31%), Gaps = 56/404 (13%)

Query: 276 FQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           +Q +  + R   K  +Y E+ TP       ++          ++   +  D   K  R  
Sbjct: 20  WQYVEGFAREIFKRYNYAEVRTPIF---EHYEVISRSVGDTTDIVTKEMYDFYDKGDRHI 76

Query: 335 ALKPMNCPGHVAVFNHGLKS-----YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
            L+P    G   V    +++       + P +    G ++R E   +     R+R F Q 
Sbjct: 77  TLRP---EGTAPVVRSYVENKLFAPEVQKPSKFYYMGPMFRYERPQA----GRLRQFHQI 129

Query: 390 DAHVFCTKEQM-FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWD------ 442
               F +       E + +    +      G +  +  L     +     AL D      
Sbjct: 130 GVECFGSSNPATDVETIAMAAHFLKEIGIQGVKLHLNTLGNPESRAAYRQALIDYLTPLK 189

Query: 443 -----DAENIMKG----VLDTIKNSSQDR-------INTGVLLGEGAFYGPK-------F 479
                D++  ++     VLD+ +   +         ++      +  F   +        
Sbjct: 190 ETLSKDSQRRLEENPLRVLDSKEKEDKVAVENAPSILDFLDEESQAHFDAVRQMLENLGV 249

Query: 480 EYILKDAI--GRDWQCGTIQVDFNLPSRFNAFYVN---SHSEKCHPVMIHRAVFG---SI 531
           +YI+   +  G D+   TI          +              +      A FG    +
Sbjct: 250 DYIIDTNMVRGLDYYNHTIFEFITEIEGNDLTVCAGGRYDGLVSYFGGPETAGFGFGLGV 309

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           ER + I+    +G      + +   +  +   A   A E+   L+      E D+ N  +
Sbjct: 310 ERLLLIL--EKQGVTLPIENALDVYIAVLGQGANVKALELVQALRQQGFKAERDYLNRKL 367

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
             + +   +     +I  G+ E     + ++   +    +VSL 
Sbjct: 368 KAQFKSADVFAAKTLITLGESEVESGQVTVKNNQTREEVQVSLE 411


>gi|239908964|ref|YP_002955706.1| alanyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
 gi|239798831|dbj|BAH77820.1| alanyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
          Length = 880

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/148 (20%), Positives = 63/148 (42%), Gaps = 8/148 (5%)

Query: 52  DPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDK 110
           + + +   E++     R+     H+C H++ +A++++        G  +  D   +DF  
Sbjct: 547 EILLDQEAELVVDAAVRAATARNHTCTHLLHKALKNVLGGHVNQAGSLVTPDRLRFDFSH 606

Query: 111 EQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN 170
               +++ELA++E ++   I  D+P + + L  E AR    +     K            
Sbjct: 607 VSAMTAEELARVEDEVNAAILLDAPVVVEELGIEAARAKGATALFGEKY-------GDVV 659

Query: 171 VTLYRQGEWFDLCRGPHVRSTGQVKKFF 198
             +   G   +LC G H+ +TGQ   F+
Sbjct: 660 RVVEVPGVSMELCGGTHIGATGQAGSFY 687


>gi|281420549|ref|ZP_06251548.1| alanine--tRNA ligase [Prevotella copri DSM 18205]
 gi|281405322|gb|EFB36002.1| alanine--tRNA ligase [Prevotella copri DSM 18205]
          Length = 887

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/145 (20%), Positives = 60/145 (41%), Gaps = 11/145 (7%)

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDELA 120
           +  E+    A   H+  H++   ++ +  +     G  + +D   +DF   Q  + +EL 
Sbjct: 565 VDIENREGSAA-NHTATHLLDYCLKQVLGDHVEQKGSYVDKDTLRFDFSHFQKVTDEELR 623

Query: 121 QIEKKMQEIIARDSPF-LKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
           ++E  + E+I  D P    +    E+A+EL        K          + V + R G  
Sbjct: 624 KVEHMVNEMIRADYPLDEHRDTPIEEAKELGAIALFGEKY--------GDKVRVVRFGPS 675

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVA 204
            + C G H + TG++  F  + + +
Sbjct: 676 AEFCGGIHAKGTGKIGFFKIISESS 700


>gi|189459794|ref|ZP_03008579.1| hypothetical protein BACCOP_00423 [Bacteroides coprocola DSM 17136]
 gi|189433494|gb|EDV02479.1| hypothetical protein BACCOP_00423 [Bacteroides coprocola DSM 17136]
          Length = 424

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 69/198 (34%), Gaps = 16/198 (8%)

Query: 245 DHRKLAREMDLFHIA----EDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQV 299
            H +LA++ DL          G+G   +  +G ++ + LI++ +       YEEI  P V
Sbjct: 143 PHWELAKKYDLIDFDLGVKITGAGFPVYKGQGARLQRALINFFLDEARAAGYEEIMPPTV 202

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           ++            Y       K       +L    L P        ++   +   ++LP
Sbjct: 203 VNA--------ASGYGTGQLPDKEGQMYHCNLDDLYLIPTAEVPVTNIYRDVILDEKQLP 254

Query: 360 VRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ++   +   +R E       + GL R+  F++ +       E       ++ + +  + +
Sbjct: 255 IKNCAYTQCFRREAGSYGKDVRGLNRLHEFSKVELVRIDKPEHSKQSHQEMLDHVEGLLQ 314

Query: 417 DFGFEKIMVKLSTRPEKR 434
                  +++L       
Sbjct: 315 KLELPYRILRLCGGDMSF 332


>gi|227512854|ref|ZP_03942903.1| seryl-tRNA synthetase [Lactobacillus buchneri ATCC 11577]
 gi|227083854|gb|EEI19166.1| seryl-tRNA synthetase [Lactobacillus buchneri ATCC 11577]
          Length = 427

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/222 (13%), Positives = 78/222 (35%), Gaps = 18/222 (8%)

Query: 242 EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLIS-YMRRKIKDDYEEINT 296
           + + H  +   + +          GS  +++   G  + + + + Y+ +  +  Y+E+  
Sbjct: 136 KPKHHWDIGENLGILDFERAAKVSGSRFVYYMGDGALLERAVYNFYLDQNTEAGYQEVIP 195

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +++      +G +  +      ++             + P      V  + + +    
Sbjct: 196 PYMVNGASMYGTGQFPKF------LESKAGYEITGTDLTMIPTAEVPLVNYYRNEIIPEE 249

Query: 357 ELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           +LPV        +R+E   +     GL+R+  F + +   F   E  ++   +I +    
Sbjct: 250 KLPVSFTALSPAFRSEAGSAGRDTKGLIRLHQFNKVEMVKFTKPEDSWDALEQITHQAED 309

Query: 414 IYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
             K  G    ++ L+T              +W  A++  + +
Sbjct: 310 NLKKLGLAYHVITLTTSDMSFTAAMTHDLEVWFPAQDKYREI 351


>gi|329957008|ref|ZP_08297576.1| serine--tRNA ligase [Bacteroides clarus YIT 12056]
 gi|328523765|gb|EGF50857.1| serine--tRNA ligase [Bacteroides clarus YIT 12056]
          Length = 424

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 69/198 (34%), Gaps = 16/198 (8%)

Query: 245 DHRKLAREMDLFHIA----EDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQV 299
            H +LA++ DL          G+G   +  KG ++ + LI++ +    K  Y EI  P V
Sbjct: 143 PHWELAKKYDLIDFDLGVKITGAGFPVYKGKGAQLQRALINFFLDEARKSGYTEIMPPTV 202

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           ++            Y       K       ++    L P        ++   +   ++LP
Sbjct: 203 VNA--------ASGYGTGQLPDKEGQMYHCEVDDLYLIPTAEVPVTNIYRDVILDEKQLP 254

Query: 360 VRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ++   +   +R E       + GL R+  F++ +       E       ++ N +  + +
Sbjct: 255 IKNCAYTQCFRREAGSYGKDVRGLNRLHEFSKVELVRIDKPEHSKESHQEMLNHVEGLLQ 314

Query: 417 DFGFEKIMVKLSTRPEKR 434
                  +++L       
Sbjct: 315 KLELPYRILRLCGGDMSF 332


>gi|296185456|ref|ZP_06853866.1| alanine--tRNA ligase [Clostridium carboxidivorans P7]
 gi|296050290|gb|EFG89714.1| alanine--tRNA ligase [Clostridium carboxidivorans P7]
          Length = 879

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 47/270 (17%), Positives = 103/270 (38%), Gaps = 22/270 (8%)

Query: 35  AKKAVAVAINGKVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQ 93
            KK VA  I   V  LS  +  +  + +   E  R+     H+  H++ EA++ +  E  
Sbjct: 525 CKKNVAGKILHFVKVLSGTIGVDHQVTLNVNEARRNNIRRNHTATHLLNEALRKVLGEHV 584

Query: 94  VAIGPIIEDG-FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFES 152
              G  ++D    +DF+  +  S +EL ++E  + + I +      Q +S E+A+E    
Sbjct: 585 HQSGSYVDDERLRFDFNHFEAPSHEELKKVEALVNDEIVKVLNVQTQSMSLEEAKE---- 640

Query: 153 KKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGD 211
                    L     K+ V +   G++  +LC G HV ++G++  F  + +   A     
Sbjct: 641 ----TGAIALFDNKYKDEVRVVSVGDFSKELCGGTHVSNSGEIGLFKIISEAGVAAGIRR 696

Query: 212 SNRPMLSRIYGTAWNTQQELTQYLYFLE-ESEKRDHRKLAREMDLFHIAEDGSGVIFWHR 270
                  +           + +    L    ++  H+   + ++L    ++         
Sbjct: 697 IEAVTGPKAIAYVEAKNDLIKEIGNKLRCSEKEIIHKLDLQALELKEKDKEI-------- 748

Query: 271 KGWKIFQTLISYMRRKIKDDYEEINTPQVL 300
              ++   L      +I + ++E+   ++ 
Sbjct: 749 --AELKSKLAGSAEDEILNGFQEVKGIKLF 776


>gi|240117118|ref|ZP_04731180.1| alanyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
 gi|268602805|ref|ZP_06136972.1| alanyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
 gi|268586936|gb|EEZ51612.1| alanyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
          Length = 874

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 61/143 (42%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFS 115
            SI     ++ R+  +  HS  H+M +A++ +        G  +  +   +D    Q  +
Sbjct: 544 DSITAKVDDEIRNANMRNHSATHLMHKALRDVLGGHVEQKGSLVTAESTRFDISHPQAVT 603

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           ++E+A++E+++ E +  +       +S E A++         K          + V + +
Sbjct: 604 AEEIAEVERRVNEAVLANVAVNAAIMSMEDAQKTDAMMLFGEKY--------GDEVRVLQ 655

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G +  +LC G HV  TG +  F
Sbjct: 656 MGGFSTELCGGTHVSRTGDIGLF 678


>gi|240079700|ref|ZP_04724243.1| alanyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
          Length = 874

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 61/143 (42%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFS 115
            SI     ++ R+  +  HS  H+M +A++ +        G  +  +   +D    Q  +
Sbjct: 544 DSITAKVDDEIRNANMRNHSATHLMHKALRDVLGGHVEQKGSLVTAESTRFDISHPQAVT 603

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           ++E+A++E+++ E +  +       +S E A++         K          + V + +
Sbjct: 604 AEEIAEVERRVNEAVLANVAVNAAIMSMEDAQKTDAMMLFGEKY--------GDEVRVLQ 655

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G +  +LC G HV  TG +  F
Sbjct: 656 MGGFSTELCGGTHVSRTGDIGLF 678


>gi|116512890|ref|YP_811797.1| histidyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11]
 gi|122939953|sp|Q02WI8|SYH_LACLS RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|116108544|gb|ABJ73684.1| histidyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11]
          Length = 430

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 63/422 (14%), Positives = 124/422 (29%), Gaps = 57/422 (13%)

Query: 269 HRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
                  +Q +    R    D +++EI TP       ++         +++   +  D  
Sbjct: 13  LPAETAKWQYIEEIARGVFNDYNFKEIRTPMF---ESYELFSRATGETSDIVTKEMYDFE 69

Query: 328 IKDLRTFALKP--MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRG 385
            K  R  AL+P          + N         PV+L     ++R E   S     R+R 
Sbjct: 70  DKGGRHIALRPEGTASAVRAYIENKLYAPEVVKPVKLWYDAPMFRYERPQS----GRLRQ 125

Query: 386 FTQD------------DAHVFCTKEQMFNE---------------------CLKIHNLII 412
           F Q             D  +    + +F +                       +     +
Sbjct: 126 FHQFGVECLGLKNSAVDVEIIAMADTLFRQLGISGVKLSLNTLGDMESRKAYRQALIDYL 185

Query: 413 SIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV-LDTIKNSSQDRINTGVLLGE 471
           + +++   E    +L+  P + + S    D A        LD +  +S+        L E
Sbjct: 186 TPFENQLSEDSRRRLNENPLRVLDSKEAEDIAIVKNAPAILDYLNETSKAYFEEVKALLE 245

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN---SHSEKCHPVMIHRAVF 528
                   +  +    G D+   TI                         +        F
Sbjct: 246 ALNIEYTIDSNM--VRGLDYYNDTIFEFIVNFDGKELTVCGGGRYDGLVEYFDGPATPAF 303

Query: 529 G---SIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD 585
           G    IER + I  +     +P     +   +  +   A   A ++A  L+     +E D
Sbjct: 304 GFGLGIERLLMIAEKQEINFIPE--ETLDVYIAVMGEKANLEATKLAESLREQAFKVERD 361

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR---RFGSTTTQKVSLLDAIPILT 642
           F N  +  + +        +II  G+ E     I ++         T   ++ ++   + 
Sbjct: 362 FSNRKLGAQFKTAEKLGAELIITLGEDEVRTGQIKVKHNQTRKQVETTLKAVHESFAPIF 421

Query: 643 KE 644
           +E
Sbjct: 422 EE 423


>gi|322417644|ref|YP_004196867.1| seryl-tRNA synthetase [Geobacter sp. M18]
 gi|320124031|gb|ADW11591.1| seryl-tRNA synthetase [Geobacter sp. M18]
          Length = 422

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 37/260 (14%), Positives = 86/260 (33%), Gaps = 21/260 (8%)

Query: 205 GAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAE---- 260
           G      +     + I  +  +      +        E + H ++   +D+         
Sbjct: 97  GFLLTVPNIPNETTPIGKSEEDNVVVRLEGDIRSYSFEPKPHWEIGESLDILDFERGAKL 156

Query: 261 DGSGVIFWHRKGWKIFQTLISYMRRKIKDD--YEEINTPQVLDQHLWQQSGHWDSYRANM 318
            G+    +   G ++ + LI++M     D+  Y E+  P ++++     +G    +  ++
Sbjct: 157 TGARFTLYKGLGARLERALINFMLDLHIDEHKYIEMLPPFMVNRDSMTGTGQLPKFEEDL 216

Query: 319 FAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SG 375
           F ++  D        F L P        +    +    +LP+    +   +R E      
Sbjct: 217 FHLEGVD--------FFLIPTAEVPVTNIHRGEILKGSDLPISYCAYTPCFRKEAGSYGK 268

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
              GL+R   F + +   F   E+ + E  K+      + +       +V+L T      
Sbjct: 269 DTRGLIRQHQFNKVELVKFTAPEESYQELQKLLGHAEEVLRRLQIPYRVVELCTGDIGFS 328

Query: 436 G----SDALWDDAENIMKGV 451
                   +W   +N  + +
Sbjct: 329 AAKTFDIEVWLPGQNCYREI 348


>gi|189467869|ref|ZP_03016654.1| hypothetical protein BACINT_04261 [Bacteroides intestinalis DSM
           17393]
 gi|189436133|gb|EDV05118.1| hypothetical protein BACINT_04261 [Bacteroides intestinalis DSM
           17393]
          Length = 424

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 68/198 (34%), Gaps = 16/198 (8%)

Query: 245 DHRKLAREMDLFHIA----EDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQV 299
            H +L ++ DL          G+G   +  KG ++ + LI++ +    K  Y EI  P V
Sbjct: 143 PHWELTKKYDLIDFDLGVKITGAGFPVYKGKGAQLQRALINFFLDEARKAGYLEIMPPTV 202

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           ++            Y       K       ++    L P        ++   +   ++LP
Sbjct: 203 VNA--------ASGYGTGQLPDKEGQMYHCEVDDLYLIPTAEVPVTNIYRDVILEEKQLP 254

Query: 360 VRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ++   +   +R E       + GL R+  F++ +       E       ++ + +  + +
Sbjct: 255 IKNCAYTQCFRREAGSYGKDVRGLNRLHEFSKVELVRIDKPEHSKQSHKEMLDHVEGLLQ 314

Query: 417 DFGFEKIMVKLSTRPEKR 434
                  +++L       
Sbjct: 315 KLELPYRILRLCGGDMSF 332


>gi|88603748|ref|YP_503926.1| seryl-tRNA synthetase [Methanospirillum hungatei JF-1]
 gi|121721452|sp|Q2FS27|SYS_METHJ RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|88189210|gb|ABD42207.1| seryl-tRNA synthetase [Methanospirillum hungatei JF-1]
          Length = 425

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 47/277 (16%), Positives = 98/277 (35%), Gaps = 22/277 (7%)

Query: 190 STGQVKKFFKLMKVAGAYWRGDSNRPMLSRI-YGTAWNTQQELTQYLYFLEES-EKRDHR 247
              + +   + +     Y+       +   +  G       E+ +Y      + E ++H 
Sbjct: 84  RIKENEAEMEEISKKIRYYLMRIPNILHESVPVGADDTQNVEVKRYGTPRTFTFELKNHG 143

Query: 248 KLAREMDL--FHIAEDGSGVIFWHRKGWKIFQ--TLISYMRRKIKD-DYEEINTPQVLDQ 302
           +LA + D   F  A   SG  F+  KG  +     L  +    + +  Y  I  P ++++
Sbjct: 144 QLAADNDWADFERATKTSGAGFYFLKGNLVLLDLALQRFSLDILMEKGYTPIIPPYMINR 203

Query: 303 HLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRL 362
             +++    D +   M+ ++  D          L   +     A++   +   ++LP+RL
Sbjct: 204 KSYEEVTDLDDFEKVMYKIEDDDA--------YLIATSEHPMAAMYQDEIFEEKDLPLRL 255

Query: 363 AEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           A     +R E         GL RV  F + +  V+C  +  +    ++      I++   
Sbjct: 256 AGLSPCFRREIGSHGLDTKGLFRVHQFHKVEQFVYCHPDDSWTIHEELRENAEEIFQKLE 315

Query: 420 FEKIMVKLSTRPEKRV----GSDALWDDAENIMKGVL 452
               +V + T     V         W   EN  + V+
Sbjct: 316 IPYRVVNICTGDIGTVAAKKYDIEAWMPRENEYREVV 352


>gi|332519199|ref|ZP_08395666.1| seryl-tRNA synthetase [Lacinutrix algicola 5H-3-7-4]
 gi|332045047|gb|EGI81240.1| seryl-tRNA synthetase [Lacinutrix algicola 5H-3-7-4]
          Length = 423

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 69/199 (34%), Gaps = 16/199 (8%)

Query: 244 RDHRKLAREMDLFHIA----EDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQ 298
           + H +LA++ D+          G+G   +  KG ++ + LISY + +     Y E   P 
Sbjct: 141 QPHWELAKKYDIIDFELGNKISGAGFPVYKGKGARLQRALISYFLDKNTAAGYTEYQLPH 200

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++++           Y       K             L P        VF   L +  +L
Sbjct: 201 LVNE--------ASCYGTGQLPDKEGQMYHDSRDDLYLIPTAEVPGTNVFRDVLLNESDL 252

Query: 359 PVRLAEFGSVYRNEPSG---SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           P+ +  +   +R E       + GL R+  F + +       E  +N    +   I SI 
Sbjct: 253 PIGITGYTPCFRREAGSYGAHVRGLNRLHQFDKVEIIRVEHPENSYNAFFGMVEHIKSIL 312

Query: 416 KDFGFEKIMVKLSTRPEKR 434
           ++      ++KL       
Sbjct: 313 RELKLPYRILKLCGGDTGF 331


>gi|300121084|emb|CBK21466.2| unnamed protein product [Blastocystis hominis]
          Length = 917

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 71/198 (35%), Gaps = 10/198 (5%)

Query: 448 MKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFN 507
           + G L+ + + ++   +  +  G   + G  +E +L D     +  G+I           
Sbjct: 697 LFGYLEAMGHLAKLSFDMSLARGLDYYTGVIYEVVLLD---NPYGVGSIGAGGRYDKLVG 753

Query: 508 AFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEY 567
            F  +   ++   V I   V    ER   I+ +       L  +P    V +        
Sbjct: 754 MFSAS--GKQIPCVGISIGV----ERVFTILEKKAADEGTLRCAPCDVFVASAGKELAAQ 807

Query: 568 AQEIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS 626
              IA +L  + +  E  ++ N  +  ++       +  I++ G++E  +  + ++   +
Sbjct: 808 RMRIAGMLWRNGIKAEFGYQANPKLQKQLTYALESGVKWIVVVGEEEMKQGKVNLKNLQT 867

Query: 627 TTTQKVSLLDAIPILTKE 644
                + +   +  L K+
Sbjct: 868 REEVTIPVESVVDELKKQ 885


>gi|170717819|ref|YP_001784880.1| seryl-tRNA synthetase [Haemophilus somnus 2336]
 gi|189083572|sp|B0UUT7|SYS_HAES2 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|168825948|gb|ACA31319.1| seryl-tRNA synthetase [Haemophilus somnus 2336]
          Length = 429

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 65/188 (34%), Gaps = 13/188 (6%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M     +   Y E   P +++      +G    +   +F +K  ++    
Sbjct: 171 ARMHRALAQFMLDLHTEQHGYTEAYVPYLVNHTTLYGTGQLPKFGEELFHIKPLENE--- 227

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
            +T+AL P        +    +    +LP+++      +R+E         GL+R+  F 
Sbjct: 228 -QTYALIPTAEVPVTNLVRDEIIDEADLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFD 286

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E+      ++ N    + +        V L T              +W  
Sbjct: 287 KVELVQIVEPEKSMEALEELTNQAEKVLQLLNLPYRKVLLCTGDMGFGATKTYDLEVWIP 346

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 347 AQNTYREI 354


>gi|282877888|ref|ZP_06286697.1| serine--tRNA ligase [Prevotella buccalis ATCC 35310]
 gi|281299889|gb|EFA92249.1| serine--tRNA ligase [Prevotella buccalis ATCC 35310]
          Length = 429

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/213 (14%), Positives = 67/213 (31%), Gaps = 20/213 (9%)

Query: 246 HRKLAREMDLFHIA----EDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVL 300
           H  L ++ +L          G+G   +  K  +  + L ++   + +   Y E+  P V+
Sbjct: 144 HWDLCKKFNLIDFDLGVKITGAGFPLYIGKMARFQRALEAFFLEEARKSGYLEVQPPFVV 203

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +            Y       K        L    L P        +F   +   ++LP+
Sbjct: 204 N--------QASGYGTGQLPDKEGQMYHVQLDDLYLIPTAEVPVTNIFRDEILDEKDLPI 255

Query: 361 RLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           +   + + +R E       + GL R+  F + +       E  +    ++   +  + K 
Sbjct: 256 KRCAYSACFRREAGSYGKDVRGLNRLHQFDKVEIVRIDKPEHSYESLNEMLEHVEGLCKK 315

Query: 418 FGFEKIMVKLSTRPEKRV----GSDALWDDAEN 446
                 ++KL                +W  A+ 
Sbjct: 316 LELPYHILKLCGGDMSFTSSICYDFEVWSAAQK 348


>gi|228954673|ref|ZP_04116696.1| Alanyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228805000|gb|EEM51596.1| Alanyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
          Length = 880

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 66/161 (40%), Gaps = 15/161 (9%)

Query: 44  NGK-----VCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP 98
           NG+     V +     ++ +++ I     RS  V  H+  H++ +A++ +        G 
Sbjct: 531 NGQNLHKVVVEEGTLTKDAAVKAIIDTKNRSSVVKNHTATHLLHQALKDVLGTHVNQAGS 590

Query: 99  -IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAY 157
            +  +   +DF       +DEL +IE+ + E I           + E+A+E+        
Sbjct: 591 LVTSERLRFDFSHFGQVQADELEKIERMVNEKIWESIDVEISQKAIEEAKEMGAMALFGE 650

Query: 158 KVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
           K          + V + + G++  +LC G HV +T  +  F
Sbjct: 651 KY--------GDVVRVVQVGDYSLELCGGCHVENTASIGIF 683


>gi|170755913|ref|YP_001782179.1| alanyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
 gi|205830032|sp|B1IJG7|SYA_CLOBK RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|169121125|gb|ACA44961.1| alanyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
          Length = 879

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 38/172 (22%), Positives = 74/172 (43%), Gaps = 23/172 (13%)

Query: 35  AKKAVAVAI-------NGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQS 87
            KK ++  +       +GKV        E  + +   E+ R+     H+  HI+  A+  
Sbjct: 525 CKKNISGKVLHFVKILDGKVA------LEDQVILKVNEERRNNIRKNHTATHILHAALIK 578

Query: 88  IWPEVQVAIGPIIEDG-FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKA 146
           +  +     G  ++D    +DF   +  S DEL ++EK + + I + +    + ++ E+A
Sbjct: 579 VVGDHVQQSGSYVDDERLRFDFSHFEAVSEDELKEVEKIVNKEIMKANAVNTKVMNIEEA 638

Query: 147 RELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
           +E             L     K++V +   G +  +LC G HV ++GQ+  F
Sbjct: 639 KE--------QGAIALFDNKYKDDVRVVSVGNFSKELCGGTHVSNSGQIGMF 682


>gi|161870450|ref|YP_001599622.1| alanyl-tRNA synthetase [Neisseria meningitidis 053442]
 gi|161596003|gb|ABX73663.1| alanyl-tRNA synthetase [Neisseria meningitidis 053442]
          Length = 885

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 61/143 (42%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFS 115
            S+     ++ R+  +  HS  H+M +A++ +        G  +  +   +D    Q  +
Sbjct: 555 DSVTAKVDDEIRNANMRNHSATHLMHKALRDVLGGHVEQKGSLVTAESTRFDISHPQAVT 614

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           ++E+A++E+++ E +  +       +S E A++         K          E V + +
Sbjct: 615 AEEIAEVERRVNEAVLANVAVNAAIMSMEDAQKTGAMMLFGEKY--------GEEVRVLQ 666

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G +  +LC G HV  TG +  F
Sbjct: 667 MGGFSTELCGGTHVSRTGDIGLF 689


>gi|118486579|gb|ABK95128.1| unknown [Populus trichocarpa]
          Length = 523

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 48/317 (15%), Positives = 110/317 (34%), Gaps = 31/317 (9%)

Query: 137 LKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKK 196
           +++ +   +A     + K   K+EI E     E     ++G            +T +   
Sbjct: 126 VQKEVERLRAERNAVANKMKGKLEISERQKLIEEGKNLKEG-----------LATLEEDL 174

Query: 197 FFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLF 256
                ++        +    L  I G   +T +++            +DH +L +E+DLF
Sbjct: 175 VKLTDELQLEAQCIPNLTHPLVPIGGEDSSTVRKMAGTPRDFGFP-VKDHLQLGKELDLF 233

Query: 257 HIAE--DGSGVIFWHRKGWKIFQT--LISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHW 311
                 + SG  F++ K   +     L+++ +   +K  +  + TP+++   + ++ G  
Sbjct: 234 DFDAAAEVSGSKFYYLKNEAVMLEMALVNWTLSEVMKKGFTPLTTPELVRSSVVEKCGFQ 293

Query: 312 DSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRN 371
                N            +     L          +    + +  +LP++   +   +R 
Sbjct: 294 PR-GDNTQVY------SIEGSDQCLIGTAEIPVGGIHMDTILAETQLPLKYVAYSHCFRT 346

Query: 372 EPS---GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLS 428
           E      +  GL RV  FT+ +  V C  E+  +   ++  +   ++   G     + ++
Sbjct: 347 EAGAAGTATRGLYRVHQFTKVEMFVLCRPEESDSYHEELIKIEEDLFSALGLHYKTLDMA 406

Query: 429 TR----PEKRVGSDALW 441
           +     P  R      W
Sbjct: 407 SGDLGAPAYRKFDVEAW 423


>gi|71899287|ref|ZP_00681448.1| Proline--tRNA ligase [Xylella fastidiosa Ann-1]
 gi|71730913|gb|EAO32983.1| Proline--tRNA ligase [Xylella fastidiosa Ann-1]
          Length = 261

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 60/186 (32%), Gaps = 19/186 (10%)

Query: 467 VLLGEGAFYGPKFEYILKDAIGRDWQCGTI-QVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
           V+ G+ A  G K        I R  + G + Q+         A  ++ + +    V +  
Sbjct: 84  VIEGDRAVDGGKI------CIARGIEVGHVFQLGRKYAEAMKATVLDEYGKA---VTMTM 134

Query: 526 AVFGS-IERFIGIMIENFKGNLPL-WLSPI---QAIVTTITSSAVEYAQEIANLLKSHHL 580
             +G  + R +   IE       + W +PI   Q  V  I           A LL +   
Sbjct: 135 GCYGIGVSRIVAAAIEQNHDVAGIIWPAPIAPWQVAVCVINPKKDPVIIAAAELLLAELQ 194

Query: 581 SIETD----FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
           S + D     R         +  +  IP  I+  ++  +  +   R   +   + +    
Sbjct: 195 SADVDTVLDDRGLRPGVMFADMELIGIPHRIVVSERGLAAGTYEYRARRTAMVENLDKTT 254

Query: 637 AIPILT 642
            +  + 
Sbjct: 255 LLTRIK 260


>gi|319410810|emb|CBY91198.1| alanyl-tRNA synthetase [Neisseria meningitidis WUE 2594]
          Length = 885

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 61/143 (42%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFS 115
            S+     ++ R+  +  HS  H+M +A++ +        G  +  +   +D    Q  +
Sbjct: 555 DSVTAKVDDEIRNANMRNHSATHLMHKALRDVLGGHVEQKGSLVTAESTRFDISHPQAVT 614

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           ++E+A++E+++ E +  +       +S E A++         K          E V + +
Sbjct: 615 AEEIAEVERRVNEAVLANVAVNAAIMSMEDAQKTGAMMLFGEKY--------GEEVRVLQ 666

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G +  +LC G HV  TG +  F
Sbjct: 667 MGGFSTELCGGTHVSRTGDIGLF 689


>gi|296313800|ref|ZP_06863741.1| alanine--tRNA ligase [Neisseria polysaccharea ATCC 43768]
 gi|296839624|gb|EFH23562.1| alanine--tRNA ligase [Neisseria polysaccharea ATCC 43768]
          Length = 873

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 61/143 (42%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFS 115
            S+     ++ R+  +  HS  H+M +A++ +        G  +  +   +D    Q  +
Sbjct: 544 DSVTAKVDDEIRNANMRNHSATHLMHKALRDVLGGHVEQKGSLVTAESTRFDISHPQAVT 603

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           ++E+A++E+++ E I  +       +S E A++         K          + V + +
Sbjct: 604 AEEIAEVERRVNEAILANVAVNAAIMSMEDAQKTGAMMLFGEKY--------GDEVRVLQ 655

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G +  +LC G HV  TG +  F
Sbjct: 656 MGGFSTELCGGTHVSRTGDIGLF 678


>gi|281492566|ref|YP_003354546.1| histidyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
 gi|281376230|gb|ADA65721.1| Histidyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
          Length = 430

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 63/422 (14%), Positives = 124/422 (29%), Gaps = 57/422 (13%)

Query: 269 HRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
                  +Q +    R    D +++EI TP       ++         +++   +  D  
Sbjct: 13  LPAETAKWQYIEEIARGVFNDYNFKEIRTPMF---ESYELFSRATGETSDIVTKEMYDFE 69

Query: 328 IKDLRTFALKP--MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRG 385
            K  R  AL+P          + N         PV+L     ++R E   S     R+R 
Sbjct: 70  DKGGRHIALRPEGTASAVRAYIENKLYAPEVVKPVKLWYDAPMFRYERPQS----GRLRQ 125

Query: 386 FTQD------------DAHVFCTKEQMF---------------------NECLKIHNLII 412
           F Q             D  +    + +F                         +     +
Sbjct: 126 FHQFGVECLGVKNPAVDVEIIAMADTLFRQLGITGLKLALNTLGDMESRMAYRQALIDYL 185

Query: 413 SIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV-LDTIKNSSQDRINTGVLLGE 471
           + +++   E    +L+  P + + S    D A        LD +  +S+        L E
Sbjct: 186 TPFENQLSEDSRRRLNENPLRVLDSKEAEDIAIVKNAPAILDYLNEASKAYFEEVKALLE 245

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN---SHSEKCHPVMIHRAVF 528
                   +  +    G D+   TI          +              +        F
Sbjct: 246 SLHIEYTIDPNM--VRGLDYYNDTIFEFIVDFDGKDLTVCGGGRYDGLVEYFDGPATPAF 303

Query: 529 G---SIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD 585
           G    IER + I  +     +P     +   +  +   A   A ++A  L+     +E D
Sbjct: 304 GFGLGIERLLMIAQKQEINFIPE--ETLDVYIAVMGEKANLEATKLAESLREQAFKVERD 361

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR---RFGSTTTQKVSLLDAIPILT 642
           F N  +  + +        +II  G+ E     I ++         T   ++ ++   + 
Sbjct: 362 FSNRKLGAQFKTAEKLGAELIITLGEDEIRTGQIKVKHNQTRKQVETTLKAVHESFAPIF 421

Query: 643 KE 644
           +E
Sbjct: 422 EE 423


>gi|240850806|ref|YP_002972206.1| alanyl-tRNA synthetase [Bartonella grahamii as4aup]
 gi|240267929|gb|ACS51517.1| alanyl-tRNA synthetase [Bartonella grahamii as4aup]
          Length = 890

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/152 (21%), Positives = 61/152 (40%), Gaps = 4/152 (2%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFS 115
             +E+      R      HS  H++ EA++ +        G ++  D   +DF   +  S
Sbjct: 546 DCVELTVDVVRRKKIRGNHSATHLLHEALRQVLGSHVTQKGSLVSPDRLRFDFSHPKSVS 605

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKAREL--FESKKEAYKVEI-LESIPAKENVT 172
            +EL +IE    EII ++S  + + ++ + A          E Y  E+ + S+       
Sbjct: 606 PEELKKIEDLANEIILQNSRVITRLMAVDDAISEGAMALFGEKYGDEVRVVSMGEPLEQR 665

Query: 173 LYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVA 204
             ++    +LC G HV  TG +       + +
Sbjct: 666 RLKKHWSIELCGGTHVERTGDIGLIHIFSESS 697


>gi|148907095|gb|ABR16691.1| unknown [Picea sitchensis]
          Length = 542

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 36/210 (17%), Positives = 75/210 (35%), Gaps = 19/210 (9%)

Query: 244 RDHRKLAREMDLFHIAE--DGSGVIFWHRKGWKIFQT--LISY-MRRKIKDDYEEINTPQ 298
           +DH  L +E+DLF      + SG  F++ K   +     LI++ +   +K  Y  ++TP 
Sbjct: 237 KDHVDLGQELDLFDFDAAAEVSGTKFYYLKNEAVLLEIGLINWALSELVKRGYTPLSTPD 296

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++   + ++ G                    +     L          ++   +     L
Sbjct: 297 IVRSSVLEKCGFQP-------RALNTQVYSIEGTDQCLAGTAEIPVGGMYMDQIIDDSLL 349

Query: 359 PVRLAEFGSVYRNEPSG---SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           P++   F   +R E      +  GL RV  F++ +  + C  E   +   ++ ++  S++
Sbjct: 350 PLKFVAFSHCFRTEAGAAGYATRGLYRVHQFSKVEMFIICRPEDSDSFHEELISIEESLF 409

Query: 416 KDFGFE----KIMVKLSTRPEKRVGSDALW 441
              G       +  +    P  R      W
Sbjct: 410 SSLGLHFKTLDMPSEDLGAPAYRKYDVEAW 439


>gi|188995245|ref|YP_001929497.1| alanyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277]
 gi|188594925|dbj|BAG33900.1| alanyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277]
          Length = 876

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 72/204 (35%), Gaps = 22/204 (10%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSDELAQIEK 124
           D R  A   H+  H++ EA++ +        G  +      +DF      S +E+ ++E+
Sbjct: 555 DKRRQAEANHTATHLLHEALREVLGTHVEQKGSFVSPEVLRFDFSHFGKMSPEEIRKVEE 614

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
            + E I       +     E+ R++  ++ +A     L      E V + + G   +LC 
Sbjct: 615 LVSERI-------RADFQREEFRDVPIAEAQAMGAMALFGEKYGEEVRVLKYGSSVELCG 667

Query: 185 GPHVRSTGQVKKFFKLMKVA--------------GAYWRGDSNRPMLSRIYGTAWNTQQE 230
           G H+ STG +  F  + + +              GA         +L  +     N    
Sbjct: 668 GTHIPSTGMIGTFRIVTESSIASGVRRIEAVTGIGAERFIYEKEDILLAVKELFNNNPNL 727

Query: 231 LTQYLYFLEESEKRDHRKLAREMD 254
           +      LEE      +    + +
Sbjct: 728 IKSIKKMLEEDASLKKQIADMKHE 751


>gi|260583982|ref|ZP_05851730.1| alanine--tRNA ligase [Granulicatella elegans ATCC 700633]
 gi|260158608|gb|EEW93676.1| alanine--tRNA ligase [Granulicatella elegans ATCC 700633]
          Length = 881

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 57/133 (42%), Gaps = 10/133 (7%)

Query: 67  PRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGF-YYDFDKEQPFSSDELAQIEKK 125
            R+  +  H+  H++ +A++ +        G ++  G+  +DF      +++ELA++E+ 
Sbjct: 561 ERAKLIKNHTATHLLHQALKEVLGTHANQAGSLVAPGYLRFDFSHFGQVTAEELAEMERI 620

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCR 184
           + E I      +    + E+A++L        K            V +     W  +LC 
Sbjct: 621 VNEKIWAALDVVTVETTLEEAKKLGAMALFGEKY--------GNKVRMVNIANWSIELCG 672

Query: 185 GPHVRSTGQVKKF 197
           G HV +T ++  F
Sbjct: 673 GVHVSNTQEIGLF 685


>gi|51473503|ref|YP_067260.1| histidyl-tRNA synthetase [Rickettsia typhi str. Wilmington]
 gi|81692304|sp|Q68X64|SYH_RICTY RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|51459815|gb|AAU03778.1| Histidine translase [Rickettsia typhi str. Wilmington]
          Length = 412

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 62/417 (14%), Positives = 135/417 (32%), Gaps = 62/417 (14%)

Query: 269 HRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
               +++   +I+  R   +   Y++++TP +    ++          +++ + +     
Sbjct: 15  LPDDYQVHNYIINKARDVGVLYGYKQMSTPILEYTRVF---NRCMGDSSDVISKEIYSFV 71

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKS--YRELPVRLAEFGSVYRNEPSGSLHGLMRVRG 385
            K     AL+P        +    + +  + +LP++L   G V+R +   +     R R 
Sbjct: 72  DKSNNAIALRP---EFTSGIIRSFISNGLHHKLPLKLFSTGPVFRYDRPQA----GRQRQ 124

Query: 386 FTQDD-AHVFCTKEQMFNECLKIHNLIISIYKD----------FGFEKIMVKLSTRPEKR 434
           F Q +  ++         E LK+   I+   +            G  +  +    +  + 
Sbjct: 125 FHQLNYEYLGAKGAITDAETLKLAVDILKALEIEEDTTLELNSLGCSESRIVYQQKLVEY 184

Query: 435 VGSDALWDDAENIMK------GVLDTIKNSSQDRI-------NTGVLLGEGAFY------ 475
           +         E+ ++       +LD+     Q  I       +      +  F       
Sbjct: 185 LNDFKDKLSGESKIRLNKNPMRILDSKSEIDQKIIANAPILSDYHTNESKKYFDELLKYL 244

Query: 476 ---GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIE 532
              G K+    +   G D+ C T+           A  +          M+ R +     
Sbjct: 245 DILGIKYSINPRLVRGLDYYCHTVFEFTTQKLGSQATILA----GGRYDMLSRIMGNYDV 300

Query: 533 RFIGIM--IENFKGNL---PLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR 587
             IG    IE            + P    V  I  + + YA +I + L+ H++    D  
Sbjct: 301 HAIGFAAGIERIALMKKYNIFVIKP--VFVLPIGKNNICYALDIVDKLRLHNIISIIDPI 358

Query: 588 NETINYKIRE--HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
              I  +I+   +   K   II  GD+E    ++  +   +     + L   + +L 
Sbjct: 359 G-KIAKRIQRVLNEDAK--FIIFVGDEEKMNNNLKFKDLKNQKEYIIDLEKVLELLK 412


>gi|294649969|ref|ZP_06727359.1| alanine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
 gi|292824138|gb|EFF82951.1| alanine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
          Length = 884

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 38/169 (22%), Positives = 72/169 (42%), Gaps = 14/169 (8%)

Query: 36  KKAVAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVA 95
           KK+    ++  +  +       S+E     D R+     HS  H++  A++ I  +    
Sbjct: 530 KKSGGAFVHQGIVTVGSLKATQSVEATVKADIRAATARNHSATHLLHAALRQILGDHVQQ 589

Query: 96  IGP-IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE------ 148
            G  +  D   +DF  +QP + D+L QIE+ +   +  ++P   + L  E A+       
Sbjct: 590 KGSLVASDILRFDFANDQPVTFDQLQQIERLVNAEVLANTPVTTELLDIETAKAKGAMML 649

Query: 149 LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
             E   +  +V  + S+  ++N +        +LC G HV+ TG +  F
Sbjct: 650 FGEKYGDEVRVLSMGSVIEEKNFS-------IELCGGIHVKRTGDIGLF 691


>gi|291515571|emb|CBK64781.1| seryl-tRNA synthetase [Alistipes shahii WAL 8301]
          Length = 423

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 36/240 (15%), Positives = 78/240 (32%), Gaps = 21/240 (8%)

Query: 220 IYGTAWNTQQELTQYLYFLEESEKR-DHRKLAREMDLFHIAE----DGSGVIFWHRKGWK 274
             G        +     +    E    H +LAR+ D+          G+G   +  KG +
Sbjct: 116 PEGKTAEDNLVVKLVESYTALPENPLPHWELARKYDIIDFDLGVKLTGAGFPVYKGKGAR 175

Query: 275 IFQTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           + + LI+Y +       Y E+  P ++++           +       K        +  
Sbjct: 176 LQRALINYFLDCNTAAGYLEVEPPVMVNE--------ASGFGTGQLPDKEGQMYHATVDN 227

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDD 390
           F L P        ++   +    + PV++  +   +R E       + GL R+  F + +
Sbjct: 228 FYLVPTAEVPVTNIYRDVILEKEDFPVKMTAYTPCFRREAGSYGKDVRGLNRLHQFDKVE 287

Query: 391 AHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAEN 446
                  E+ +     +   + SI K  G    +++L                ++ +A+ 
Sbjct: 288 IVQLSLPEKSYEALDGMVAHVESIVKALGLPYRILRLCGGDMSFTSALTYDFEVYSEAQK 347


>gi|259502226|ref|ZP_05745128.1| histidine-tRNA ligase [Lactobacillus antri DSM 16041]
 gi|259169844|gb|EEW54339.1| histidine-tRNA ligase [Lactobacillus antri DSM 16041]
          Length = 425

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 62/425 (14%), Positives = 131/425 (30%), Gaps = 67/425 (15%)

Query: 270 RKGWK--------IFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            KG          +++ + +  R   +   Y  I TP       ++         +++  
Sbjct: 6   PKGTADLLPGTTGLWEKVEANAREVFRQFGYRGIRTPMF---EDYRVFARNVGDTSDIVE 62

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVF--NHGLKSYRELPVRLAEFGSVYRNEPSGSLH 378
            +  D   K  R  AL+P    G V  +  N         P ++   G ++R E   S  
Sbjct: 63  KEMYDFHDKGDRHIALRPEGTAGVVRAYVENKLYGPEYPKPYKVYYMGPMFRYERPQS-- 120

Query: 379 GLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK--------------IM 424
              R R F Q    V     +     +++  + +++++ FG                   
Sbjct: 121 --GRQREFHQIG--VEALNNESPQIDVEVIAMAMALFRKFGVPNVKLVINTLGDKQVRQD 176

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKG----VLDTIKNSSQDR-------INTGVLLGEGA 473
            + +     +   D L  D++  +      VLD+     Q         ++      +  
Sbjct: 177 YREALINYLKPHYDELSADSQERLYKNPLRVLDSKDAGDQKLVADAPSILDYLDDESQAY 236

Query: 474 FY---------GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIH 524
           F          G  +E       G D+   TI    +    F   Y    +   +  +I 
Sbjct: 237 FDQVQALLKELGIDYEIDTNMVRGLDYYNHTIFEIMSDSPVFGGGYTTVCAGGRYNGLIS 296

Query: 525 R--------AVFGSIERFIGIMIENFKGNLPLWLSPIQAIV-TTITSSAVE-YAQEIANL 574
           +          FG     + +++E    +        Q  +         +  A E+ N 
Sbjct: 297 QLGGPEEGGIGFGMGVERLMLLLEQENPDFAP---QDQLDLFLASADDQGDNLAFELLNK 353

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           ++ H +  + D+    +  +I+E   +      + GD+E S     ++   +    +V +
Sbjct: 354 VRQHGIVADKDYSGVKVGKQIKEAFRRNAKYFAVFGDREVSAGQFQLKNAATKDAVEVKV 413

Query: 635 LDAIP 639
            D   
Sbjct: 414 ADFAA 418


>gi|240016958|ref|ZP_04723498.1| alanyl-tRNA synthetase [Neisseria gonorrhoeae FA6140]
          Length = 874

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 61/143 (42%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFS 115
            S+     ++ R+  +  HS  H+M +A++ +        G  +  +   +D    Q  +
Sbjct: 544 DSVTAKVDDEIRNANMRNHSATHLMHKALRDVLGGHVEQKGSLVTAESTRFDISHPQAVT 603

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           ++E+A++E+++ E +  +       +S E A++         K          + V + +
Sbjct: 604 AEEIAEVERRVNEAVLANVAVNAAIMSMEDAQKTDAMMLFGEKY--------GDEVRVLQ 655

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G +  +LC G HV  TG +  F
Sbjct: 656 MGGFSTELCGGTHVSRTGDIGLF 678


>gi|229071897|ref|ZP_04205108.1| Alanyl-tRNA synthetase [Bacillus cereus F65185]
 gi|228711193|gb|EEL63157.1| Alanyl-tRNA synthetase [Bacillus cereus F65185]
          Length = 880

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 66/161 (40%), Gaps = 15/161 (9%)

Query: 44  NGK-----VCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP 98
           NG+     V +     ++ +++ I     RS  V  H+  H++ +A++ +        G 
Sbjct: 531 NGQNLHKVVVEEGTLTKDAAVKAIIDTKNRSSVVKNHTATHLLHQALKDVLGTHVNQAGS 590

Query: 99  -IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAY 157
            +  +   +DF       +DEL +IE+ + E I           + E+A+E+        
Sbjct: 591 LVTSERLRFDFSHFGQVQADELEKIERMVNEKIWESIDVEISQKAIEEAKEMGAMALFGE 650

Query: 158 KVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
           K          + V + + G++  +LC G HV +T  +  F
Sbjct: 651 KY--------GDVVRVVQVGDYSLELCGGCHVENTASIGIF 683


>gi|194097831|ref|YP_002000876.1| alanyl-tRNA synthetase [Neisseria gonorrhoeae NCCP11945]
 gi|239998317|ref|ZP_04718241.1| alanyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|240014513|ref|ZP_04721426.1| alanyl-tRNA synthetase [Neisseria gonorrhoeae DGI18]
 gi|240113728|ref|ZP_04728218.1| alanyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|240116471|ref|ZP_04730533.1| alanyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|240121035|ref|ZP_04733997.1| alanyl-tRNA synthetase [Neisseria gonorrhoeae PID24-1]
 gi|240125067|ref|ZP_04737953.1| alanyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
 gi|254494482|ref|ZP_05107653.1| alanyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
 gi|268599798|ref|ZP_06133965.1| alanyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|268602141|ref|ZP_06136308.1| alanyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|268683663|ref|ZP_06150525.1| alanyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
 gi|193933121|gb|ACF28945.1| AlaS [Neisseria gonorrhoeae NCCP11945]
 gi|226513522|gb|EEH62867.1| alanyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
 gi|268583929|gb|EEZ48605.1| alanyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|268586272|gb|EEZ50948.1| alanyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|268623947|gb|EEZ56347.1| alanyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
          Length = 874

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 61/143 (42%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFS 115
            S+     ++ R+  +  HS  H+M +A++ +        G  +  +   +D    Q  +
Sbjct: 544 DSVTAKVDDEIRNANMRNHSATHLMHKALRDVLGGHVEQKGSLVTAESTRFDISHPQAVT 603

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           ++E+A++E+++ E +  +       +S E A++         K          + V + +
Sbjct: 604 AEEIAEVERRVNEAVLANVAVNAAIMSMEDAQKTDAMMLFGEKY--------GDEVRVLQ 655

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G +  +LC G HV  TG +  F
Sbjct: 656 MGGFSTELCGGTHVSRTGDIGLF 678


>gi|163847354|ref|YP_001635398.1| proline--tRNA ligase [Chloroflexus aurantiacus J-10-fl]
 gi|222525199|ref|YP_002569670.1| Proline--tRNA ligase [Chloroflexus sp. Y-400-fl]
 gi|163668643|gb|ABY35009.1| Proline--tRNA ligase [Chloroflexus aurantiacus J-10-fl]
 gi|222449078|gb|ACM53344.1| Proline--tRNA ligase [Chloroflexus sp. Y-400-fl]
          Length = 525

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 17/118 (14%), Positives = 44/118 (37%), Gaps = 6/118 (5%)

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNLPLWLSPIQA-----IVTTITSSAVE 566
             +E  +  +I   +   +E  + +++E +      +W + I       +      + V 
Sbjct: 388 QDAEGQNRPLIITGLEIDLEPLLYLVVEQHHDERGIVWPAAIAPFAIHLVTLGRGEAVVT 447

Query: 567 YAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRF 624
               +A +L++    +  D R+E    K  +  +   P  ++  +K  +   + IR  
Sbjct: 448 AGHALAAMLQTAGWHVLIDDRDERAGVKFNDADLIGAPWRVVISEKLLAANQLEIRHR 505


>gi|125975678|ref|YP_001039588.1| alanyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|205830037|sp|A3DKB6|SYA_CLOTH RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|125715903|gb|ABN54395.1| alanyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
          Length = 880

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 62/134 (46%), Gaps = 11/134 (8%)

Query: 63  TPEDPRSLAVIR-HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELA 120
           T +  R +A+ R H+  H++ +A++++        G ++E D   +DF      + +E+ 
Sbjct: 553 TIDKKRRMAIARNHTTTHLLHKALRNVLGSHVNQAGSLVEPDRLRFDFTHFSAMTPEEIK 612

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW- 179
            +E ++ E I        + +S ++AR++  +     K          + V + + G++ 
Sbjct: 613 SVEDQVNEKILESIAVDIREMSIDEARKMGATALFGEKY--------GDVVRVVKIGDYS 664

Query: 180 FDLCRGPHVRSTGQ 193
            +LC G H+  T Q
Sbjct: 665 IELCGGTHLNVTSQ 678


>gi|168491651|ref|ZP_02715794.1| histidyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
 gi|183574087|gb|EDT94615.1| histidyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
          Length = 429

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 61/404 (15%), Positives = 126/404 (31%), Gaps = 56/404 (13%)

Query: 276 FQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           +Q +  + R   K  +Y E+ TP       ++          ++   +  D   K  R  
Sbjct: 20  WQYVEGFAREIFKRYNYAEVRTPIF---EHYEVISRSVGDTTDIVTKEMYDFYDKGDRHI 76

Query: 335 ALKPMNCPGHVAVFNHGLKS-----YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
            L+P    G   V    +++       + P +    G ++R E   +     R+R F Q 
Sbjct: 77  TLRP---EGTAPVVRSYVENKLFAPEVQKPSKFYYMGPMFRYERPQA----GRLRQFHQI 129

Query: 390 DAHVFCTKEQM-FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWD------ 442
               F +       E + +    +      G +  +  L     +     AL D      
Sbjct: 130 GVECFGSSNPATDVETIAMAAHFLKEIGIQGVKLHLNTLGNPESRAAYRQALIDYLTPLK 189

Query: 443 -----DAENIMKG----VLDTIKNSSQDR-------INTGVLLGEGAFYGPK-------F 479
                D++  ++     VLD+ +   +         ++      +  F   +        
Sbjct: 190 ETLSKDSQRRLEENPLRVLDSKEKEDKVAVENAPSILDFLDEESQAHFDAVRQMLENLGV 249

Query: 480 EYILKDAI--GRDWQCGTIQVDFNLPSRFNAFYVN---SHSEKCHPVMIHRAVFG---SI 531
           +YI+   +  G D+   TI          +              +      A FG    +
Sbjct: 250 DYIIDTNMVRGLDYYNHTIFEFITEIEGNDLTVCAGGRYDGLVAYFGGPETAGFGFGLGV 309

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           ER +  +I   +G      + +   +  +   A   A E+   L+      E D+ N  +
Sbjct: 310 ERLL--LIFEKQGVALPIENALDVYIAVLGDGANAKALELVQALRQQGFKAERDYLNRKL 367

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
             + +   +     +I  G+ E     + I+   +    +VSL 
Sbjct: 368 KAQFKSADVFAAKTLITLGESEVESGQVTIKNNQTREEVQVSLE 411


>gi|310643515|ref|YP_003948273.1| alanyl-tRNA synthetase [Paenibacillus polymyxa SC2]
 gi|309248465|gb|ADO58032.1| Alanyl-tRNA synthetase [Paenibacillus polymyxa SC2]
          Length = 877

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/175 (17%), Positives = 68/175 (38%), Gaps = 10/175 (5%)

Query: 32  RSLAKKAVAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE 91
             L K      ++  V +  +     +++    +  R      H+  H++ +A++ +  +
Sbjct: 520 EGLFKAPQGQHVHQVVVEAGELNVGDTVKAEVDQASRGEIEKNHTATHLLHKALKEVLGD 579

Query: 92  VQVAIGPIIEDG-FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELF 150
                G ++E G   +DF      + +ELA IE ++   I        +    ++A+ L 
Sbjct: 580 HVNQAGSLVEPGRLRFDFSHFGSITPEELADIELRVNRAIWSQLNVTIELKPIDEAKALG 639

Query: 151 ESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKFFKLMKVA 204
                  K          + V + + G++  +LC G HV +T Q+  F  + +  
Sbjct: 640 AMALFGEKY--------GDIVRVVKVGDYSIELCGGCHVSNTSQIGLFKLVSESG 686


>gi|293396837|ref|ZP_06641111.1| serine-tRNA ligase [Serratia odorifera DSM 4582]
 gi|291420308|gb|EFE93563.1| serine-tRNA ligase [Serratia odorifera DSM 4582]
          Length = 430

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 62/188 (32%), Gaps = 10/188 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M     +   Y E   P +++      +G    +  ++F  K  ++   D
Sbjct: 170 ARMHRALAQFMLDLHTEQHGYLETYVPYLVNHATLYGTGQLPKFGEDLFHTKPLEEE-SD 228

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
              +AL P        +    +     LP+++      +R+E         GL+R+  F 
Sbjct: 229 SSNYALIPTAEVPLTNLVRDEILEEESLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFD 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E   +   ++      + +        V L T              +W  
Sbjct: 289 KVEMVQIVRPEDSMDALEELTGHAEKVLQLLNLPYRKVLLCTGDMGFGSSKTYDLEVWLP 348

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 349 AQNTYREI 356


>gi|292654231|ref|YP_003534128.1| glycyl-tRNA synthetase [Haloferax volcanii DS2]
 gi|291372518|gb|ADE04745.1| glycyl-tRNA synthetase [Haloferax volcanii DS2]
          Length = 594

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 40/306 (13%), Positives = 87/306 (28%), Gaps = 52/306 (16%)

Query: 371 NEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR 430
            E  G      R R       H+   +    ++C    + +   + +             
Sbjct: 286 YETVGVDMDRFRFRQ------HLAGERAHYSSDCWDAESEVDGDWIEIAGFSYRSDYDLS 339

Query: 431 PEKRVGSDAL-----WDDAENIMKGVLD-----------TIKNSSQDRINTGVLLGEGAF 474
                G D       +D+ + + + V+D                  + + T       AF
Sbjct: 340 KHGEYGDDDFTVFQQYDEPKTVERAVVDPDMATLGPEFGAQAADVAEALETLAERDPDAF 399

Query: 475 YGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
                + +  D  G +        D ++   F         E   P ++       I+R 
Sbjct: 400 DA---DEVTLDVDGEEITV-----DTDVA-NFAVETQTEAGEHITPHVV--EPSFGIDRT 448

Query: 535 IGIMIENFKGN------------LPLWLSPIQAIVTTITSSA---VEYAQEIANLLKSHH 579
           +  ++ +                L   ++P    V  + S+    V+ A ++A  L++  
Sbjct: 449 VYTLLAHAYETDEVDGEARSYLSLSPSVAPTNVGVFPLVSNVDGLVDLADDVAEELRAAG 508

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEAS---ERSIGIRRFGSTTTQKVSLLD 636
            ++  D    +I  + R       P  I             ++ IR   S    ++ + D
Sbjct: 509 FAVVYDDSG-SIGRRYRRQDEVGTPFCITIDRDGLEGDGADTVTIRERDSGKQVRLPVDD 567

Query: 637 AIPILT 642
            +  L 
Sbjct: 568 LVGTLV 573



 Score = 43.2 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 55/201 (27%), Gaps = 63/201 (31%)

Query: 263 SGVIFWHRKGWKIFQTLISYMRRK--IKDDYEEINTPQVLDQHLWQQSGHWDSY------ 314
            G   +  +G  +   +    R +  +++   EI  P ++ + +++ SGH D +      
Sbjct: 31  GGFYTYGPQGAALKSNVEEAWRERFAVQEGNLEIEAPTIMPEPVFEASGHLDGFDDMLVE 90

Query: 315 ---RANMFAVKCADDTIKDLRT-------------------------------------- 333
                         +   +L                                        
Sbjct: 91  CAECGESHRADHLIEDNSELEDAETLSPEAAAEKIADLGLVCPTCGADLAGQSVEDFNLM 150

Query: 334 ------------FALKPMNCPGHVAVF-NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGL 380
                         L+P    G    F      +   LP  + + G  YRNE S     +
Sbjct: 151 FETNIGPGSSTPGYLRPETAQGIFVEFPRIKEYARNSLPFGVTQVGRAYRNEISPR-KSI 209

Query: 381 MRVRGFTQDDAHVFCTKEQMF 401
           +R R FTQ +   F   E+  
Sbjct: 210 VRTREFTQAELEHFIDPERDE 230


>gi|293364647|ref|ZP_06611368.1| histidine--tRNA ligase [Streptococcus oralis ATCC 35037]
 gi|307702905|ref|ZP_07639853.1| histidyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
 gi|291316905|gb|EFE57337.1| histidine--tRNA ligase [Streptococcus oralis ATCC 35037]
 gi|307623585|gb|EFO02574.1| histidyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
          Length = 426

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 60/404 (14%), Positives = 126/404 (31%), Gaps = 56/404 (13%)

Query: 276 FQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           +Q +  + R   K  +Y E+ TP       ++          ++   +  D   K  R  
Sbjct: 20  WQYVEGFAREIFKRYNYAEVRTPIF---EHYEVISRSVGDTTDIVTKEMYDFYDKGDRHI 76

Query: 335 ALKPMNCPGHVAVFNHGLKS-----YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
            L+P    G   V    +++       + P +    G ++R E   +     R+R F Q 
Sbjct: 77  TLRP---EGTAPVVRSYVENKLFAPEVQKPSKFYYMGPMFRYERPQA----GRLRQFHQI 129

Query: 390 DAHVFCTKEQM-FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWD------ 442
               F +       E + +    +      G +  +  L     +     AL D      
Sbjct: 130 GVECFGSSNPATDVETIAMAAHFLKEIGIQGVKLHLNTLGNPESRAAYRQALIDYLTPLK 189

Query: 443 -----DAENIMKG----VLDTIKNSSQDR-------INTGVLLGEGAFYGPK-------F 479
                D++  ++     VLD+ +   +         ++      +  F   +        
Sbjct: 190 ETLSKDSQRRLEENPLRVLDSKEKEDKVAVENAPSILDFLDAESQAHFDAVRQMLENLGV 249

Query: 480 EYILKDAI--GRDWQCGTIQVDFNLPSRFNAFYVN---SHSEKCHPVMIHRAVFG---SI 531
           +YI+   +  G D+   TI          +              +      A FG    +
Sbjct: 250 DYIIDTNMVRGLDYYNHTIFEFITEIEGNDLTVCAGGRYDGLVAYFGGPETAGFGFGLGV 309

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           ER + I+    +G      + +   +  +   A   A E+   L+      E D+ N  +
Sbjct: 310 ERLLLIL--EKQGVSLPIENALDVYIAVLGEGANVKALELVQALRQQGFKAERDYLNRKL 367

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
             + +   +     +I  G+ E     + ++   +    +VSL 
Sbjct: 368 KAQFKSADVFAAKTLITLGESEVESGQVTVKNNQTREEVQVSLE 411


>gi|256003587|ref|ZP_05428576.1| alanyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|255992378|gb|EEU02471.1| alanyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|316939793|gb|ADU73827.1| alanyl-tRNA synthetase [Clostridium thermocellum DSM 1313]
          Length = 880

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 62/134 (46%), Gaps = 11/134 (8%)

Query: 63  TPEDPRSLAVIR-HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELA 120
           T +  R +A+ R H+  H++ +A++++        G ++E D   +DF      + +E+ 
Sbjct: 553 TIDKKRRMAIARNHTTTHLLHKALRNVLGSHVNQAGSLVEPDRLRFDFTHFSAMTPEEIK 612

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW- 179
            +E ++ E I        + +S ++AR++  +     K          + V + + G++ 
Sbjct: 613 SVEDQVNEKILESIAVDIREMSIDEARKMGATALFGEKY--------GDVVRVVKIGDYS 664

Query: 180 FDLCRGPHVRSTGQ 193
            +LC G H+  T Q
Sbjct: 665 IELCGGTHLNVTSQ 678


>gi|224438519|ref|ZP_03659439.1| seryl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
 gi|313144946|ref|ZP_07807139.1| seryl-tRNA synthetase synthetase [Helicobacter cinaedi CCUG 18818]
 gi|313129977|gb|EFR47594.1| seryl-tRNA synthetase synthetase [Helicobacter cinaedi CCUG 18818]
          Length = 425

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 62/189 (32%), Gaps = 8/189 (4%)

Query: 271 KGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
            G K+ + LI++M    +   +E + TP + +      +G    +  +MF V    D   
Sbjct: 172 MGAKLNRALINFMLDYNERQGFESVVTPVIANARTLFGTGQLPKFENDMFKVDSHFDEEG 231

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGF 386
                 L   +      ++   +     LP+ L      +R E   +     G++R   F
Sbjct: 232 SEHDLYLISTSEITLTNLYQDSIIPSENLPIMLTSHTPCFRKEAGSAGRDTRGMIRQHQF 291

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD----ALWD 442
            + +        Q      K+      I  + G     ++L         S+     +W 
Sbjct: 292 DKVELVAITHPSQSEAMQEKMLKTASGILSELGLPHRFMRLCGGDLGFSASNTIDIEVWL 351

Query: 443 DAENIMKGV 451
             +N  + +
Sbjct: 352 PGQNCYREI 360


>gi|281416686|ref|ZP_06247706.1| alanyl-tRNA synthetase [Clostridium thermocellum JW20]
 gi|281408088|gb|EFB38346.1| alanyl-tRNA synthetase [Clostridium thermocellum JW20]
          Length = 880

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 62/134 (46%), Gaps = 11/134 (8%)

Query: 63  TPEDPRSLAVIR-HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELA 120
           T +  R +A+ R H+  H++ +A++++        G ++E D   +DF      + +E+ 
Sbjct: 553 TIDKKRRMAIARNHTTTHLLHKALRNVLGSHVNQAGSLVEPDRLRFDFTHFSAMTPEEIK 612

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW- 179
            +E ++ E I        + +S ++AR++  +     K          + V + + G++ 
Sbjct: 613 SVEDQVNEKILESIAVDIREMSIDEARKMGATALFGEKY--------GDVVRVVKIGDYS 664

Query: 180 FDLCRGPHVRSTGQ 193
            +LC G H+  T Q
Sbjct: 665 IELCGGTHLNVTSQ 678


>gi|34540951|ref|NP_905430.1| alanyl-tRNA synthetase [Porphyromonas gingivalis W83]
 gi|41018164|sp|Q7MV54|SYA_PORGI RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|34397266|gb|AAQ66329.1| alanyl-tRNA synthetase [Porphyromonas gingivalis W83]
          Length = 876

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 72/204 (35%), Gaps = 22/204 (10%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSDELAQIEK 124
           D R  A   H+  H++ EA++ +        G  +      +DF      S +E+ ++E+
Sbjct: 555 DKRRQAEANHTATHLLHEALREVLGTHVEQKGSFVSPEVLRFDFSHFGKMSPEEIRKVEE 614

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
            + E I       +     E+ R++  ++ +A     L      E V + + G   +LC 
Sbjct: 615 LVSERI-------RADFQREEFRDVPIAEAQAMGAMALFGEKYGEEVRVLKYGSSVELCG 667

Query: 185 GPHVRSTGQVKKFFKLMKVA--------------GAYWRGDSNRPMLSRIYGTAWNTQQE 230
           G H+ STG +  F  + + +              GA         +L  +     N    
Sbjct: 668 GTHIPSTGMIGAFRIVTESSIASGVRRIEAVTGIGAERFIYEKEDILLAVKELFNNNPNL 727

Query: 231 LTQYLYFLEESEKRDHRKLAREMD 254
           +      LEE      +    + +
Sbjct: 728 IKSIKKMLEEDASLKKQIADMKHE 751


>gi|323141849|ref|ZP_08076713.1| serine--tRNA ligase [Phascolarctobacterium sp. YIT 12067]
 gi|322413689|gb|EFY04544.1| serine--tRNA ligase [Phascolarctobacterium sp. YIT 12067]
          Length = 426

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 37/244 (15%), Positives = 84/244 (34%), Gaps = 22/244 (9%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIF 276
           G        +  +    +   E + H  +   + +          G+  +F+   G ++ 
Sbjct: 114 GKDDTCNPVIRTWGEPTKFDFEPKAHWDIGENLGILDFERGVKVSGARYVFYRGMGSRLE 173

Query: 277 QTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           + +I++          Y E   P +++    Q +G    +  +M+ ++  D         
Sbjct: 174 RAVINFFLDVHTRKHGYTEFFPPFIVNGASMQGTGQLPKFAEDMYKLENGD--------M 225

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDA 391
            L P             + +  ELP++   + + +R E   +     GL+R+  F + + 
Sbjct: 226 YLIPTAEVPVTNYHRDDILTGDELPLKYTAYSACFRAEAGAAGRDTRGLIRMHQFNKVEL 285

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENI 447
             F   E+ + E  K+ N    + +  G    +V+L T              +W  A N 
Sbjct: 286 VKFTKPEESWAELDKLTNDAEEVLQLLGLPYHVVRLCTGDLGFSSATTYDLEVWLPAANC 345

Query: 448 MKGV 451
            + +
Sbjct: 346 YREI 349


>gi|315929558|gb|EFV08748.1| alanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 305]
          Length = 715

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/142 (22%), Positives = 63/142 (44%), Gaps = 9/142 (6%)

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQI 122
             + R      HS  H++  A++ I        G ++E +   +DF   +  + +EL  I
Sbjct: 411 DTEKREQIARHHSATHLLHHALREILGSHVSQAGSLVESNKLRFDFTHHKALNKEELESI 470

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDL 182
           EK++ ++I   S  + + +  E+A++         K +         NV +   GE  +L
Sbjct: 471 EKRVNKMIINSSEAILENMPLEEAKKSGAIALFNEKYQ--------GNVRVLTLGESKEL 522

Query: 183 CRGPHVRSTGQVKKFFKLMKVA 204
           C G HV++T Q+  F+ + +  
Sbjct: 523 CGGTHVKNTAQIGSFYIVKESG 544


>gi|262039269|ref|ZP_06012587.1| histidine--tRNA ligase [Leptotrichia goodfellowii F0264]
 gi|261746763|gb|EEY34284.1| histidine--tRNA ligase [Leptotrichia goodfellowii F0264]
          Length = 412

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 65/390 (16%), Positives = 138/390 (35%), Gaps = 43/390 (11%)

Query: 288 KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
           K  +E I TP + +  L+++S        ++ + +  D   K  R   L+P    G V  
Sbjct: 32  KYGFERIITPILEETELFRRS---VGDETDVVSKEMYDFKDKGERNVTLRPEGTAGVVRA 88

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF-CTKEQMFNECLK 406
           +        +  V+    G +YR E         R R F Q  A +F      +  E +K
Sbjct: 89  YLEAGLHKSDPVVKWFYNGPMYRYEAPQK----GRYREFHQIGAEIFGIRSPYLDAEVIK 144

Query: 407 IHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTG 466
           +    +      G    +  L     ++   D L +     +  + +  K   +      
Sbjct: 145 MGCEFLEKLGITGLTVELNSLGNLESRKKYIDDLKEFMAQRLDKLSEDSKKRYEKNPLRA 204

Query: 467 VLLGEG-----AFYGPK-FEYILKDA------IGRDWQCGTIQVDFN-LPSRFNAFYVNS 513
           +   +          PK ++Y+ +++        R  +   ++   N    R   +Y ++
Sbjct: 205 LDSKDKGDQEQFKDAPKLYDYLDEESKKYFEDTKRYLEILGVKYVENPKLVRGLDYYSDT 264

Query: 514 HSEKCHPVMIHRAVF---GSIERFIGIM-------------IENFKGNLPLWLSPIQA-- 555
             E     +  +A     G  +R + I+             +E     +   L   +   
Sbjct: 265 VFEIKSDKLGAQATVLAGGRYDRLLEILDNVKIPAIGFAAGMERAAMLMDESLLEQKEEK 324

Query: 556 IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP--IIIICGDKE 613
           I         EY  +    L+   + +  D+  ++ + ++++    KI    ++I G++E
Sbjct: 325 IYVVYFDETKEYFIKTVEELRKKGIKVNFDYNPKSFSAQMKKA--NKINAEYVLILGEEE 382

Query: 614 ASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             E  + ++RF +   +K +L + I IL K
Sbjct: 383 QKENVVTLKRFSTGEQEKYNLKEVIEILNK 412


>gi|169829321|ref|YP_001699479.1| alanyl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
 gi|168993809|gb|ACA41349.1| Alanyl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
          Length = 842

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/144 (21%), Positives = 64/144 (44%), Gaps = 10/144 (6%)

Query: 56  EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPF 114
           E +++ I   D R+L +  H+  HIM  A++ +  +     G  +  D   +DF      
Sbjct: 577 EDAVQAIVHRDDRNLIIKNHTATHIMQRALKDVLGDHVNQAGSYVGPDRLRFDFSHFGQV 636

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
           + +EL QIE+ + E +  D   + + ++ ++A+          K          + V + 
Sbjct: 637 TKEELQQIERIVNEKVWDDIEVVIEEMAIDQAKAKGAMALFGEKY--------GDVVRVV 688

Query: 175 RQGEW-FDLCRGPHVRSTGQVKKF 197
             G++  +LC G HV+ + ++  F
Sbjct: 689 SIGDYSIELCGGIHVKRSSEIGFF 712


>gi|118579055|ref|YP_900305.1| seryl-tRNA synthetase [Pelobacter propionicus DSM 2379]
 gi|166222758|sp|A1ALM7|SYS_PELPD RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|118501765|gb|ABK98247.1| seryl-tRNA synthetase [Pelobacter propionicus DSM 2379]
          Length = 422

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 64/189 (33%), Gaps = 17/189 (8%)

Query: 272 GWKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
           G ++ + LIS+M         Y E+  P ++++     +G    +  ++F +        
Sbjct: 168 GARMERALISFMLDLHTASHGYLEVLPPFMVNRDSMTGTGQLPKFEEDLFKMTDP----- 222

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGF 386
               + L P        +    +    +LP+R A +   +R E         GL+R   F
Sbjct: 223 ---EYFLIPTAEVPVTNIHRGEILKKSDLPIRYAAYTPCFRREAGSYGKDTRGLIRQHQF 279

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST----RPEKRVGSDALWD 442
            + +   F    Q   E  K+      + +       ++ L +        R     +W 
Sbjct: 280 NKVELVKFSHPSQSAEELEKLTADAEKVLQLLELPYRVMALCSADIGFSAARTYDLEVWL 339

Query: 443 DAENIMKGV 451
             +N  + +
Sbjct: 340 PGQNCYREI 348


>gi|70998636|ref|XP_754040.1| glycyl-tRNA synthetase [Aspergillus fumigatus Af293]
 gi|66851676|gb|EAL92002.1| glycyl-tRNA synthetase [Aspergillus fumigatus Af293]
 gi|159126226|gb|EDP51342.1| glycyl-tRNA synthetase [Aspergillus fumigatus A1163]
          Length = 699

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 25/216 (11%), Positives = 70/216 (32%), Gaps = 15/216 (6%)

Query: 446 NIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSR 505
             +   ++ +    ++++   +          K E  ++       +     V     +R
Sbjct: 479 KAVAAAVEALSQELREKLAIDLEKNG------KIEVDVEGVGSGKVELDQDIVKIEKRTR 532

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK---GNLPLWLSPIQAIVTTITS 562
                  + +       I R ++  IE       E+      + P  ++P + ++  +++
Sbjct: 533 VENVREYTPNVIEPSFGIGRILYSMIEHVYWAREEDEARGVLSFPPAIAPTKVLIVPLST 592

Query: 563 --SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
             S     Q++   L+   +S   D  + +I  +   +     P  I    +   + +  
Sbjct: 593 HASFRPLLQQLMTKLRRMGISNRVDDSSASIGKRYARNDELGTPFGITVDFQSVKDNTFT 652

Query: 621 IRRFGSTTTQKVSLLDAIPILTK----ESLPPDCQK 652
           +R   +T   + S  + +  +      E    D +K
Sbjct: 653 LRDRDTTKQVRASEDEILQAIKSLVDGEKTWEDIRK 688


>gi|268595847|ref|ZP_06130014.1| alanyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|268549635|gb|EEZ44654.1| alanyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
          Length = 881

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 61/143 (42%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFS 115
            SI     ++ R+  +  HS  H+M +A++ +        G  +  +   +D    Q  +
Sbjct: 551 DSITAKVDDEIRNANMRNHSATHLMHKALRDVLGGHVEQKGSLVTAESTRFDISHPQAVT 610

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           ++E+A++E+++ E +  +       +S E A++         K          + V + +
Sbjct: 611 AEEIAEVERRVNEAVLANVAVNAAIMSMEDAQKTDAMMLFGEKY--------GDEVRVLQ 662

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G +  +LC G HV  TG +  F
Sbjct: 663 MGGFSTELCGGTHVSRTGDIGLF 685


>gi|297569857|ref|YP_003691201.1| alanyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
 gi|296925772|gb|ADH86582.1| alanyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
          Length = 879

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 61/143 (42%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFS 115
             + +   E  R      H+  H++  A++ +  E     G +++ +   +DF    P S
Sbjct: 551 AEVLLAVAEGRRRQTAAHHTATHLLHAALRRVLGEHVKQAGSLVDAERLRFDFTHFSPLS 610

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            +E+ ++E+ + E I  ++      L  E+A +   +     K          + V +  
Sbjct: 611 REEIRRVEELVNEEIRANTRLEVATLPREEALQSGAAALFGEKY--------GDTVRVVA 662

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G++  +LC G HV +TG++  F
Sbjct: 663 VGDFSKELCGGTHVGATGEIGLF 685


>gi|218887314|ref|YP_002436635.1| seryl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|226701585|sp|B8DQP8|SYS_DESVM RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|218758268|gb|ACL09167.1| seryl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 425

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 66/188 (35%), Gaps = 17/188 (9%)

Query: 273 WKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L ++       +  Y EI  P ++++     +G    +  ++F +        +
Sbjct: 170 ARMERALANFFLDTHVTEHGYVEIIPPFMVNRKTMTGTGQLPKFEEDLFKL--------E 221

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
              + L P        +    +    +LP+  A     +R+E         GL+R   FT
Sbjct: 222 GWDYFLIPTAEVPLTNLHADDVLEEAQLPMGYAAMTPCFRSEAGSYGKDTRGLIRQHQFT 281

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +   F   E+ F+E  K+      + +  G    ++ L T              +W  
Sbjct: 282 KVEMVRFAHPERSFDELEKMRGHAEVLLQRLGLPYRVITLCTGDMGFSSAKTYDIEVWLP 341

Query: 444 AENIMKGV 451
            +N  + +
Sbjct: 342 GQNAYREI 349


>gi|325130665|gb|EGC53406.1| alanyl-tRNA synthetase [Neisseria meningitidis OX99.30304]
          Length = 874

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 62/143 (43%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFS 115
            S+     ++ R+  +  HS  H+M +A++ +  E     G  +  +   +D    Q  +
Sbjct: 544 DSVTAKVDDEIRNANMRNHSATHLMHKALRDVLGEHVEQKGSLVTAESTRFDISHPQAVT 603

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           ++E+A++E+++ E I  +       +S E A++         K          + V + +
Sbjct: 604 AEEIAEVERRVNEAILANVAVNAAIMSMEDAQKTGAMMLFGEKY--------GDEVRVLQ 655

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G +  +LC G HV  TG +  F
Sbjct: 656 MGGFSTELCGGTHVSRTGDIGLF 678


>gi|325982390|ref|YP_004294792.1| seryl-tRNA synthetase [Nitrosomonas sp. AL212]
 gi|325531909|gb|ADZ26630.1| seryl-tRNA synthetase [Nitrosomonas sp. AL212]
          Length = 438

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 37/249 (14%), Positives = 86/249 (34%), Gaps = 17/249 (6%)

Query: 220 IYGTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDL--FHIAEDGSGVIFWHRKG--WK 274
             G       ++  +    +     +DH  +   + L  F  A   SG  F   KG   +
Sbjct: 112 PDGKDETGNVQIRHWGEPRQFDFAIKDHVSIGEGLGLLDFETAAKLSGARFSLMKGGLAR 171

Query: 275 IFQTLISYMRRK--IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT---IK 329
           + + L  +M     ++  Y E   P +++++  + +G    +  ++FA+   D       
Sbjct: 172 LHRALAQFMLDTHTLEHGYTETYVPYLVNRNSLRGTGQLPKFAQDLFAITAGDAESSSAG 231

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGF 386
           ++  + L P        +    +   + LP++       +R+E         GL+R   F
Sbjct: 232 NISEYHLIPTAEVPITNMVRDEIVPLQSLPLKYVSHTPCFRSEAGSYGRDTRGLIRQHQF 291

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWD 442
            + +       +Q ++   ++      I +       ++ L T              +W 
Sbjct: 292 DKVELVHIVHPDQSYDALEQLVGHAEKILQKLMLPYRVMALCTGDMGFSAAKTYDIEVWL 351

Query: 443 DAENIMKGV 451
            A+N  + +
Sbjct: 352 PAQNTYREI 360


>gi|237650856|ref|ZP_04525108.1| histidyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974]
 gi|237822706|ref|ZP_04598551.1| histidyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974M2]
          Length = 425

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 60/404 (14%), Positives = 126/404 (31%), Gaps = 56/404 (13%)

Query: 276 FQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           +Q +  + R   K  +Y E+ TP       ++          ++   +  D   K  R  
Sbjct: 20  WQYVEGFAREIFKRYNYAEVRTPIF---EHYEVISRSVGDTTDIVTKEMYDFYDKGDRHI 76

Query: 335 ALKPMNCPGHVAVFNHGLKS-----YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
            L+P    G   V    +++       + P +    G ++R E   +     R+R F Q 
Sbjct: 77  TLRP---EGTAPVVRSYVENKLFAPEVQKPSKFYYMGPMFRYERPQA----GRLRQFHQI 129

Query: 390 DAHVFCTKEQM-FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWD------ 442
               F +       E + +    +      G +  +  L     +     AL D      
Sbjct: 130 GVECFGSSNPATDVETISMAAYFLKEIGIQGVKLHLNTLGNPESRAAYRQALIDYLTPLK 189

Query: 443 -----DAENIMKG----VLDTIKNSSQDR-------INTGVLLGEGAFYGPK-------F 479
                D++  ++     VLD+ +   +         ++      +  F   +        
Sbjct: 190 ETLSKDSQRRLEENPLRVLDSKEKEDKVAVENAPSILDFLDEESQTHFDAVRQMLENLGV 249

Query: 480 EYILKDAI--GRDWQCGTIQVDFNLPSRFNAFYVN---SHSEKCHPVMIHRAVFG---SI 531
           +YI+   +  G D+   TI          +              +      A FG    +
Sbjct: 250 DYIIDTNMVRGLDYYNHTIFEFITEIEGNDLTVCAGGRYDGLVAYFGGPETAGFGFGLGV 309

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           ER + I+    +G      + +   +  +   A   A E+   L+      E D+ N  +
Sbjct: 310 ERLLLIL--EKQGVALPIENALDVYIAVLGDGANVKALELVQALRQQGFKAERDYLNRKL 367

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
             + +   +     +I  G+ E     + ++   +    +VSL 
Sbjct: 368 KAQFKSADVFAAKTLITLGESEVESGQVTVKNNQTREEVQVSLE 411


>gi|261854984|ref|YP_003262267.1| alanyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
 gi|261835453|gb|ACX95220.1| alanyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
          Length = 872

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 28/150 (18%), Positives = 59/150 (39%), Gaps = 11/150 (7%)

Query: 45  GKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDG 103
           G+V +    + + +   I  E   S+  + HS  H++  A++ +        G  +  + 
Sbjct: 531 GEVIEGRVALGDVADAQIDVERRHSIR-LNHSATHLLHAALRQVLGTHVHQKGSRVGAES 589

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE 163
             +DF + +P +  +L +IE+ +   I  +     + +  ++AR          K     
Sbjct: 590 LRFDFSQSEPITDAQLREIERIVNAQIRENHSVETREMPVDEARAAGAMALFGEKY---- 645

Query: 164 SIPAKENVTLYRQGEW-FDLCRGPHVRSTG 192
                + V +   G +  +LC G H R  G
Sbjct: 646 ----GDVVRVVTMGPFSMELCGGTHARRGG 671


>gi|188534278|ref|YP_001908075.1| seryl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
 gi|238689714|sp|B2VC55|SYS_ERWT9 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|188029320|emb|CAO97197.1| Seryl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
          Length = 430

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 22/188 (11%), Positives = 61/188 (32%), Gaps = 10/188 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
             + + L  +M     +   Y+E   P +++      +G    +  ++F  +  D+    
Sbjct: 170 ALMHRALSQFMLDLHTEQHGYQETYVPYLVNHASLYGTGQLPKFGEDLFHTRPLDEEAS- 228

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
              +AL P +      +    +     LP+++      +R+E         GL+R+  F 
Sbjct: 229 SSNYALIPTSEVPLTNLVRDEILEEETLPLKMTAHTPCFRSEAGAYGRDTRGLIRMHQFD 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI----MVKLSTRPEKRVGSDALWDD 443
           + +       E   +   ++      + +                    ++     +W  
Sbjct: 289 KVEMVHITRPEDSMDALEELVGHAEKVLQLLNLPYRKVLLCTGDMGFGAQKTYDLEVWLP 348

Query: 444 AENIMKGV 451
           A++  + +
Sbjct: 349 AQDTYREI 356


>gi|149002958|ref|ZP_01827869.1| histidyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
 gi|149006905|ref|ZP_01830586.1| histidyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74]
 gi|225855611|ref|YP_002737123.1| histidyl-tRNA synthetase [Streptococcus pneumoniae JJA]
 gi|254782350|sp|C1CH52|SYH_STRZJ RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|147758961|gb|EDK65956.1| histidyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
 gi|147761506|gb|EDK68471.1| histidyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74]
 gi|225722383|gb|ACO18236.1| histidyl-tRNA synthetase [Streptococcus pneumoniae JJA]
          Length = 429

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 60/404 (14%), Positives = 126/404 (31%), Gaps = 56/404 (13%)

Query: 276 FQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           +Q +  + R   K  +Y E+ TP       ++          ++   +  D   K  R  
Sbjct: 20  WQYVEGFAREIFKRYNYAEVRTPIF---EHYEVISRSVGDTTDIVTKEMYDFYDKGDRHI 76

Query: 335 ALKPMNCPGHVAVFNHGLKS-----YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
            L+P    G   V    +++       + P +    G ++R E   +     R+R F Q 
Sbjct: 77  TLRP---EGTAPVVRSYVENKLFAPEVQKPSKFYYMGPMFRYERPQA----GRLRQFHQI 129

Query: 390 DAHVFCTKEQM-FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWD------ 442
               F +       E + +    +      G +  +  L     +     AL D      
Sbjct: 130 GVECFGSSNPATDVETISMAAYFLKEIGIQGVKLHLNTLGNPESRAAYRQALIDYLTPLK 189

Query: 443 -----DAENIMKG----VLDTIKNSSQDR-------INTGVLLGEGAFYGPK-------F 479
                D++  ++     VLD+ +   +         ++      +  F   +        
Sbjct: 190 ETLSKDSQRRLEENPLRVLDSKEKEDKVAVENAPSILDFLDEESQTHFDAVRQMLENLGV 249

Query: 480 EYILKDAI--GRDWQCGTIQVDFNLPSRFNAFYVN---SHSEKCHPVMIHRAVFG---SI 531
           +YI+   +  G D+   TI          +              +      A FG    +
Sbjct: 250 DYIIDTNMVRGLDYYNHTIFEFITEIEGNDLTVCAGGRYDGLVAYFGGPETAGFGFGLGV 309

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           ER + I+    +G      + +   +  +   A   A E+   L+      E D+ N  +
Sbjct: 310 ERLLLIL--EKQGVALPIENALDVYIAVLGDGANVKALELVQALRQQGFKAERDYLNRKL 367

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
             + +   +     +I  G+ E     + ++   +    +VSL 
Sbjct: 368 KAQFKSADVFAAKTLITLGESEVESGQVTVKNNQTREEVQVSLE 411


>gi|330816605|ref|YP_004360310.1| Alanyl-tRNA synthetase [Burkholderia gladioli BSR3]
 gi|327368998|gb|AEA60354.1| Alanyl-tRNA synthetase [Burkholderia gladioli BSR3]
          Length = 874

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 33/136 (24%), Positives = 60/136 (44%), Gaps = 9/136 (6%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKM 126
           R+     HS  H+M +A++ +        G +++ D   +DF    P S DE+ ++E  +
Sbjct: 557 RARTERNHSVTHLMHKALREVLGSHVQQKGSLVDADKTRFDFAHNAPMSDDEIRRVEAIV 616

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGP 186
              I  +SP +   +S+++A +         K          + V +   G   +LC G 
Sbjct: 617 NAEILANSPGIVSNMSYDEAVKGGAMALFGEKY--------GDEVRVLDLGFSRELCGGT 668

Query: 187 HVRSTGQVKKFFKLMK 202
           HVR TG +  F  +M+
Sbjct: 669 HVRRTGDIGFFKIVME 684


>gi|297543541|ref|YP_003675843.1| seryl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|296841316|gb|ADH59832.1| seryl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 423

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 40/252 (15%), Positives = 87/252 (34%), Gaps = 23/252 (9%)

Query: 204 AGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHI---- 258
            G  W   +       I G +     E+ ++    +   E + H ++  E+D+       
Sbjct: 97  EGILWTIPNIPHESVPI-GDSDEDNVEVRRWGEPRKFDFEPKSHWEIGEELDILDFEAAA 155

Query: 259 AEDGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRA 316
              GS   F+   G ++ + LI++M     +   Y E+  P ++ +     +G    +  
Sbjct: 156 RVTGSRFTFYKGLGARLERALINFMLDLHVEKHGYTEVFPPFIVHRRSMLGTGQLPKFEE 215

Query: 317 NMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS 376
           + F V   D        + L P        ++   +    +LP+    + + +R E   +
Sbjct: 216 DAFKVYGTD--------YFLIPTAEVPVTNMYRDTIIDGDKLPIYHCAYSACFRQEAGSA 267

Query: 377 ---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
                GL+R   F + +   F   ++ + E  K+      + +  G    +V + T    
Sbjct: 268 GRDTRGLIRQHQFNKVELVKFTEPDKSYEELEKMTKDAEEVLQLLGLPYRVVAICTGDLG 327

Query: 434 RV----GSDALW 441
                     +W
Sbjct: 328 FTASKKYDIEVW 339


>gi|319952367|ref|YP_004163634.1| alanyl-tRNA synthetase [Cellulophaga algicola DSM 14237]
 gi|319421027|gb|ADV48136.1| alanyl-tRNA synthetase [Cellulophaga algicola DSM 14237]
          Length = 871

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 59/142 (41%), Gaps = 10/142 (7%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGF-YYDFDKEQPFSS 116
           + + +  +  R      H+  H++ +A++ I        G  +   +  +DF      ++
Sbjct: 546 TFKAVVDQKQRRRTEANHTATHLLHQALREILGAHVEQKGSAVHSKYLRFDFSHFSKMTA 605

Query: 117 DELAQIEKKMQEIIARDSPFLK-QYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           DELA++E+ +   I  + P  + + +  + A E         K          + V   R
Sbjct: 606 DELAEVERFVNARIEGNLPLEEGRNIPMQTAIEQGAMALFGEKY--------GDAVRTIR 657

Query: 176 QGEWFDLCRGPHVRSTGQVKKF 197
            G+  +LC G HV++TG +  F
Sbjct: 658 FGKSIELCGGTHVKNTGDIWHF 679


>gi|319638074|ref|ZP_07992838.1| alanyl-tRNA synthetase [Neisseria mucosa C102]
 gi|317400719|gb|EFV81376.1| alanyl-tRNA synthetase [Neisseria mucosa C102]
          Length = 964

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 62/143 (43%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFS 115
            S+     ++ R+  +  HS  H+M +A++ +  E     G  +  +   +D    Q  +
Sbjct: 634 DSVTAKVDDEIRNANMRNHSATHLMHKALRDVLGEHVEQKGSLVTAESTRFDISHPQAVT 693

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           ++E+A++E+++ E I  +       +S E A++         K          + V + +
Sbjct: 694 AEEIAEVERRVNEAILANVAVNAAIMSMEDAQKTGAMMLFGEKY--------GDEVRVLQ 745

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G +  +LC G HV  TG +  F
Sbjct: 746 MGGFSTELCGGTHVSRTGDIGLF 768


>gi|262305779|gb|ACY45482.1| glu- + pro-tRNA synthetase [Polyxenus fasciculatus]
          Length = 136

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 48/133 (36%), Gaps = 16/133 (12%)

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           G  +    E  +  A GR  Q GT   +  N    F   + +  +       + +  +G 
Sbjct: 1   GGDFTTTVEAYI-AASGRGIQGGTSHHLGQNFSKMFEIVFEDPDNPGGDKKFVFQNSWGL 59

Query: 531 IERFIGIMIENFKGNLPLWLSP----IQAIVTT----------ITSSAVEYAQEIANLLK 576
             R IG+M+     N  L L P    IQ ++               + +   + +   LK
Sbjct: 60  TTRTIGVMVMVHADNTGLVLPPRVACIQVVIVPCGITASLPESDKKTLJAKCESVELQLK 119

Query: 577 SHHLSIETDFRNE 589
           +  + ++ DFR+ 
Sbjct: 120 AAGVRVKGDFRDN 132


>gi|218249169|ref|YP_002374745.1| alanyl-tRNA synthetase [Borrelia burgdorferi ZS7]
 gi|218164357|gb|ACK74418.1| alanyl-tRNA synthetase [Borrelia burgdorferi ZS7]
          Length = 594

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 54/130 (41%), Gaps = 10/130 (7%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           H+  H++ +A+Q +  +     G  I  +   +DF   +  + DE+ ++E+ +   I   
Sbjct: 456 HTATHLLHKALQLVLGDHVRQKGSNITAERLRFDFIHSEKMTDDEIKKVEEIVNLQIKNS 515

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTG 192
               K  +   +ARE         K          + V++Y    +  ++C GPHV +T 
Sbjct: 516 LSVKKIIMKLSEAREKGAMALFGEKY--------DDLVSVYEIDGFSLEVCGGPHVENTN 567

Query: 193 QVKKFFKLMK 202
           ++  F    +
Sbjct: 568 ELGTFKIQKE 577


>gi|222630224|gb|EEE62356.1| hypothetical protein OsJ_17145 [Oryza sativa Japonica Group]
          Length = 848

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 49/357 (13%), Positives = 124/357 (34%), Gaps = 27/357 (7%)

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRE 357
           V  +    +  + + Y+ +        +T++               + +  + +K ++R+
Sbjct: 512 VYRRDNPSKGRYREFYQCDFDIA-GVYETMEPDFEVIKVLTELLDQLDIGTYEIKLNHRK 570

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRV--RGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           L   + E   V   +       + ++  + F Q    +   K        KI +L+ +  
Sbjct: 571 LLDGMLEICGVPPEKFRTVCSSIDKLDKQTFEQVKKELVDEKGISNETADKIGDLVKTRG 630

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                   + K  ++     GS    ++ E I+   LD      +   +  +  G   + 
Sbjct: 631 PPLEVLLELRKEGSKFMGNAGSVTALNELE-ILFKALDKANAIGKIVFDLSLARGLDYYT 689

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           G  +E + K       Q G+I        R++        ++   V +   +    ER  
Sbjct: 690 GVIYEAVFKGTT----QVGSIAAGG----RYDNLVGMFSGKQVPAVGVSLGI----ERVF 737

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            IM +       +  +  + +V+ I    +  A E+ + L +  +  E       +  +I
Sbjct: 738 AIMEQQEMEKNQIRATETEVLVSIIGKDLI-LAAELVSELWNAGIKAEF-----KLTTRI 791

Query: 596 RE----HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
           +      +   IP +++ G+ E S   + ++   ++  ++V   +   +L ++   P
Sbjct: 792 QNHLKYATQSGIPWMVLVGESEISSGKVKLKNLAASQEEEVDRTEFAQVLKQKLRNP 848


>gi|125550869|gb|EAY96578.1| hypothetical protein OsI_18483 [Oryza sativa Indica Group]
          Length = 885

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 49/357 (13%), Positives = 124/357 (34%), Gaps = 27/357 (7%)

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRE 357
           V  +    +  + + Y+ +        +T++               + +  + +K ++R+
Sbjct: 549 VYRRDNPSKGRYREFYQCDFDIA-GVYETMEPDFEVIKVLTELLDQLDIGTYEIKLNHRK 607

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRV--RGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           L   + E   V   +       + ++  + F Q    +   K        KI +L+ +  
Sbjct: 608 LLDGMLEICGVPPEKFRTVCSSIDKLDKQTFEQVKKELVDEKGISNETADKIGDLVKTRG 667

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                   + K  ++     GS    ++ E I+   LD      +   +  +  G   + 
Sbjct: 668 PPLEVLLELRKEGSKFMGNAGSVTALNELE-ILFKALDKANAIGKIVFDLSLARGLDYYT 726

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           G  +E + K       Q G+I        R++        ++   V +   +    ER  
Sbjct: 727 GVIYEAVFKGTT----QVGSIAAGG----RYDNLVGMFSGKQVPAVGVSLGI----ERVF 774

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            IM +       +  +  + +V+ I    +  A E+ + L +  +  E       +  +I
Sbjct: 775 AIMEQQEMEKNQIRATETEVLVSIIGKDLI-LAAELVSELWNAGIKAEF-----KLTTRI 828

Query: 596 RE----HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
           +      +   IP +++ G+ E S   + ++   ++  ++V   +   +L ++   P
Sbjct: 829 QNHLKYATQSGIPWMVLVGESEISSGKVKLKNLAASQEEEVDRTEFAQVLKQKLRNP 885


>gi|115462139|ref|NP_001054669.1| Os05g0150900 [Oryza sativa Japonica Group]
 gi|109940176|sp|P93422|SYH_ORYSJ RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|54291833|gb|AAV32201.1| histidyl-tRNA synthetase [Oryza sativa Japonica Group]
 gi|113578220|dbj|BAF16583.1| Os05g0150900 [Oryza sativa Japonica Group]
          Length = 788

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 49/357 (13%), Positives = 124/357 (34%), Gaps = 27/357 (7%)

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRE 357
           V  +    +  + + Y+ +        +T++               + +  + +K ++R+
Sbjct: 452 VYRRDNPSKGRYREFYQCDFDIA-GVYETMEPDFEVIKVLTELLDQLDIGTYEIKLNHRK 510

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRV--RGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           L   + E   V   +       + ++  + F Q    +   K        KI +L+ +  
Sbjct: 511 LLDGMLEICGVPPEKFRTVCSSIDKLDKQTFEQVKKELVDEKGISNETADKIGDLVKTRG 570

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                   + K  ++     GS    ++ E I+   LD      +   +  +  G   + 
Sbjct: 571 PPLEVLLELRKEGSKFMGNAGSVTALNELE-ILFKALDKANAIGKIVFDLSLARGLDYYT 629

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           G  +E + K       Q G+I        R++        ++   V +   +    ER  
Sbjct: 630 GVIYEAVFKGTT----QVGSIAAGG----RYDNLVGMFSGKQVPAVGVSLGI----ERVF 677

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            IM +       +  +  + +V+ I    +  A E+ + L +  +  E       +  +I
Sbjct: 678 AIMEQQEMEKNQIRATETEVLVSIIGKDLI-LAAELVSELWNAGIKAEF-----KLTTRI 731

Query: 596 RE----HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
           +      +   IP +++ G+ E S   + ++   ++  ++V   +   +L ++   P
Sbjct: 732 QNHLKYATQSGIPWMVLVGESEISSGKVKLKNLAASQEEEVDRTEFAQVLKQKLRNP 788


>gi|315635769|ref|ZP_07891032.1| serine--tRNA ligase [Arcobacter butzleri JV22]
 gi|315480066|gb|EFU70736.1| serine--tRNA ligase [Arcobacter butzleri JV22]
          Length = 412

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 67/188 (35%), Gaps = 16/188 (8%)

Query: 272 GWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G ++ + LI+YM     +  + E   P + + +  Q +G    +  ++F +        +
Sbjct: 168 GARLERALINYMLDFNRQRGFNEWYVPFMANSNTLQGTGQLPKFADDLFKI--------E 219

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFT 387
                L P        ++N  +    ELP+ L  +   +R E   +     GL+R   F 
Sbjct: 220 GEDLYLIPTAEVSLTNLYNDEIIDKSELPLLLTSYTPCFRKEAGSAGRDTRGLIRQHQFD 279

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG----SDALWDD 443
           + +     ++EQ      K+ N    +    G     V+L +              +W  
Sbjct: 280 KVEMVAITSQEQSDEIFEKMVNCASDLLSSLGLCHQKVQLCSGDLGFSAAVTIDLEVWLP 339

Query: 444 AENIMKGV 451
            +N  + +
Sbjct: 340 GQNKFREI 347


>gi|306828547|ref|ZP_07461742.1| histidine--tRNA ligase [Streptococcus mitis ATCC 6249]
 gi|304429346|gb|EFM32431.1| histidine--tRNA ligase [Streptococcus mitis ATCC 6249]
          Length = 426

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 63/409 (15%), Positives = 129/409 (31%), Gaps = 57/409 (13%)

Query: 276 FQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           +Q +  + R   K  +Y E+ TP       ++          ++   +  D   K  R  
Sbjct: 20  WQYVEGFAREIFKRYNYAEVRTPIF---EHYEVISRSVGDTTDIVTKEMYDFYDKGDRHI 76

Query: 335 ALKPMNCPGHVAVFNHGLKS-----YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
            L+P    G   V    +++       + P +    G ++R E   +     R+R F Q 
Sbjct: 77  TLRP---EGTAPVVRSYVENKLFAPEVQKPSKFYYMGPMFRYERPQA----GRLRQFHQI 129

Query: 390 DAHVFCTKEQM-FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWD------ 442
               F +       E + +    +      G +  +  L     +     AL D      
Sbjct: 130 GVECFGSSNPATDVETIAMAAHFLKEIGIQGVKLHLNTLGNPESRAAYRQALIDYLTPLK 189

Query: 443 -----DAENIMKG----VLDTIKNSSQDR-------INTGVLLGEGAFYGPK-------F 479
                D++  ++     VLD+ +   +         ++      +  F   +        
Sbjct: 190 ETLSKDSQRRLEENPLRVLDSKEKEDKVAVENAPSILDFLDEESQAHFDAVRQMLENLGV 249

Query: 480 EYILKDAI--GRDWQCGTIQVDFNLPSRFNAFYVN---SHSEKCHPVMIHRAVFG---SI 531
           +YI+   +  G D+   TI          N              +      A FG    +
Sbjct: 250 DYIIDTNMVRGLDYYNHTIFEFITEIEGNNLTVCAGGRYDGLVAYFGGPETAGFGFGLGV 309

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           ER + I+    +G      + +   +  +   A   A ++   L+      E D+ N  +
Sbjct: 310 ERLLLIL--EKQGVALPIENALDVYIAVLGEGANVKALQLVQALRQQGFKAERDYLNRKL 367

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
             + +   +     +I  G+ E     + ++   +    +VSL DAI  
Sbjct: 368 KAQFKSADVFAAKTLITLGESEVESGQVTVKNNQTREEVQVSL-DAISQ 415


>gi|222529322|ref|YP_002573204.1| alanyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
 gi|222456169|gb|ACM60431.1| alanyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
          Length = 883

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 43/191 (22%), Positives = 81/191 (42%), Gaps = 10/191 (5%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFS 115
            S+     E+ R  A+  H+  H++  A++ I  +     G  +  D   +DF   +P S
Sbjct: 546 SSVVAKVDEELRLAAMKNHTATHLLHSALRKILGQHAQQSGSQVTPDRLRFDFAHYEPLS 605

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            ++L +IE+ +  II +  P  K     + A  +  +     K   +        V + +
Sbjct: 606 EEQLIEIEEMVNNIIQQAIPVEKIVTDLDSALRMGATALFDEKYSNV--------VRVIK 657

Query: 176 QGEW-FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
            G++  +LC G HV +TGQ+  F  + + + A           +++Y    NTQQ L Q 
Sbjct: 658 IGDFSMELCGGTHVDNTGQIGMFKIISESSVAAGVRRIEAITGNKVYEFILNTQQTLKQL 717

Query: 235 LYFLEESEKRD 245
              ++ S   +
Sbjct: 718 RSKVKASTDSE 728


>gi|157736606|ref|YP_001489289.1| seryl-tRNA synthetase [Arcobacter butzleri RM4018]
 gi|166987309|sp|A8ERP6|SYS_ARCB4 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|157698460|gb|ABV66620.1| seryl-tRNA synthetase [Arcobacter butzleri RM4018]
          Length = 412

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 67/188 (35%), Gaps = 16/188 (8%)

Query: 272 GWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G ++ + LI+YM     +  + E   P + + +  Q +G    +  ++F +        +
Sbjct: 168 GARLERALINYMLDFNRQRGFNEWYVPFMANSNTLQGTGQLPKFADDLFKI--------E 219

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFT 387
                L P        ++N  +    ELP+ L  +   +R E   +     GL+R   F 
Sbjct: 220 GEDLYLIPTAEVSLTNLYNDEIIDKSELPLLLTSYTPCFRKEAGSAGRDTRGLIRQHQFD 279

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG----SDALWDD 443
           + +     ++EQ      K+ N    +    G     V+L +              +W  
Sbjct: 280 KVEMVAITSQEQSDEIFEKMVNCASDLLSSLGLCHQKVQLCSGDLGFSAAVTIDLEVWLP 339

Query: 444 AENIMKGV 451
            +N  + +
Sbjct: 340 GQNKFREI 347


>gi|116617315|ref|YP_817686.1| seryl-tRNA synthetase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|122272484|sp|Q03ZQ9|SYS_LEUMM RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|116096162|gb|ABJ61313.1| seryl-tRNA synthetase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
          Length = 435

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 70/188 (37%), Gaps = 16/188 (8%)

Query: 272 GWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G ++ + + ++M     ++ Y E+ TP V++      +G +  ++ + + V+  + T   
Sbjct: 178 GARLERAVYNFMLDEHRQEGYTEMITPIVVNDSAMFGTGQYPKFQDDAYRVEGLNQT--- 234

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFT 387
                  P         ++       +LP++       +R E   +     GL+R+  F 
Sbjct: 235 -----YIPTAEVPLTNYYSGEELPSEDLPIKFTALSPSFRKEAGSAGKDTRGLIRLHQFN 289

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +   F   E  + E  K+     +I +       ++ LST              +W  
Sbjct: 290 KVEMVKFTKPEDSYEELEKMTLDAENILQKLNLPYHVIVLSTGDMGFSAAKTYDIEVWMP 349

Query: 444 AENIMKGV 451
            +N+ + +
Sbjct: 350 QQNVYREI 357


>gi|113474598|ref|YP_720659.1| histidyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
 gi|110165646|gb|ABG50186.1| histidyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
          Length = 467

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 80/200 (40%), Gaps = 15/200 (7%)

Query: 445 ENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPS 504
           E ++ GV +   +  +  I+  +  G   + G  +E  L   IG +   G+I        
Sbjct: 274 ETVISGVRNLGVSDQRFCIDLSIARGLDYYTGTVYETTL---IGHE-ALGSICSGG---- 325

Query: 505 RFNAFYVNSHSEKCHPVMIHRAVFGSIERFI-GIMIENFKGNLPLWLSPIQAIVTTITSS 563
           R+         EK   V I   +   + R +   ++E+F        +P   +V  +  S
Sbjct: 326 RYEELVGTFIGEKMPGVGISIGLTRLMSRLLKAGILESFAP------TPATVMVVNMQES 379

Query: 564 AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRR 623
            +    +++  L+   +++ T F    +  ++++   +KIP  II G +EA+     ++ 
Sbjct: 380 LMATYLDVSQKLRRSGMNVITSFDGRGVGKQLQQADKQKIPFCIIIGSEEAAANMCSLKD 439

Query: 624 FGSTTTQKVSLLDAIPILTK 643
             +    KV +     +L +
Sbjct: 440 LRTGEQMKVPIGSLADVLKQ 459


>gi|319945852|ref|ZP_08020102.1| histidine--tRNA ligase [Streptococcus australis ATCC 700641]
 gi|319747917|gb|EFW00161.1| histidine--tRNA ligase [Streptococcus australis ATCC 700641]
          Length = 424

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 64/415 (15%), Positives = 130/415 (31%), Gaps = 60/415 (14%)

Query: 269 HRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
             +    +Q +  + R   K  +Y EI TP       ++          ++   +  D  
Sbjct: 13  LPQESAKWQYVEGFARETFKKYNYAEIRTPIF---EHYEVISRSVGDTTDIVTKEMYDFY 69

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKS-----YRELPVRLAEFGSVYRNEPSGSLHGLMR 382
            K  R   L+P    G   V    +++       + P ++   G ++R E   +     R
Sbjct: 70  DKGDRHITLRP---EGTAPVVRSYVENKLFAPEVQKPSKVYYIGPMFRYERPQA----GR 122

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK------LSTRPEKRVG 436
           +R F Q     F +        ++   +    +K+ G E +++        ++R   R  
Sbjct: 123 LRQFHQIGVECFGSSNPA--TDVETIAMADQFFKEIGIENVVLHLNTLGSTASRTAYRQA 180

Query: 437 --------SDALWDDAENIMKG----VLDTIKNSSQ----------DRINTGVLLGEGA- 473
                    D L  D++  ++     VLD+ +   +          D ++        A 
Sbjct: 181 LIDYLLPMKDQLSKDSQRRLEENPLRVLDSKEKEDKQAVENAPSILDYLDEESQEHFDAV 240

Query: 474 ---FYGPKFEYILKDAI--GRDWQCGTIQVDFNLPSRFNAFYVN---SHSEKCHPVMIHR 525
                G   +Y++   +  G D+   TI                         +      
Sbjct: 241 RAMLDGLGIDYVIDTNMVRGLDYYNHTIFEFVTKVDGNELTVCAGGRYDGLVEYFGGPAT 300

Query: 526 AVFG---SIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSI 582
             FG    +ER + I+  + +G      + +   V  + S A   A E+   L+      
Sbjct: 301 PGFGFGMGLERLLLIL--DKQGVELPVEASLDVYVAVLGSEAEVAALELVQALRRQGFIA 358

Query: 583 ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
           E D+    +  + +   +     II  G  E     I ++   +      S+ D 
Sbjct: 359 ERDYLGRKLKAQFKSADVFGAKTIIALGGSEVESGQITVKNNQTRQEVTTSIEDV 413


>gi|254805364|ref|YP_003083585.1| Alanyl-tRNA synthetase [Neisseria meningitidis alpha14]
 gi|254668906|emb|CBA07085.1| Alanyl-tRNA synthetase [Neisseria meningitidis alpha14]
          Length = 885

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 61/143 (42%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFS 115
            S+     ++ R+  +  HS  H+M +A++ +        G  +  +   +D    Q  +
Sbjct: 555 DSVTAKVDDEIRNANMRNHSATHLMHKALRDVLGGHVEQKGSLVTAESTRFDISHPQAVT 614

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           ++E+A++E+++ E +  +       +S E A++         K          E V + +
Sbjct: 615 AEEIAEVERRVNEAVLANVAVNAAIMSMEDAQKTGAMMLFGEKY--------GEEVRVLQ 666

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G +  +LC G HV  TG +  F
Sbjct: 667 MGGFSTELCGGTHVSRTGDIGLF 689


>gi|209964228|ref|YP_002297143.1| alanyl-tRNA synthetase [Rhodospirillum centenum SW]
 gi|209957694|gb|ACI98330.1| alanyl-tRNA synthetase AlaS [Rhodospirillum centenum SW]
          Length = 898

 Score = 62.1 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 2/141 (1%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSD 117
           +E+      R+     HS  H++ EA++    E     G  +  +   +D  +  P S++
Sbjct: 555 VELRVDGARRADIRANHSATHLLHEALRRRLGEHVTQKGSLVAPERLRFDISQPTPLSAE 614

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           ++  +E ++   I  +S    + +S + A EL        K      + +   V      
Sbjct: 615 DVQVVEAEVNRRILGNSEVTTRLMSPDAAIELGAMALFGEKYGEEVRVVSMGGVDAGGNK 674

Query: 178 EW-FDLCRGPHVRSTGQVKKF 197
           E+  +LC G HVR TG +  F
Sbjct: 675 EFSVELCGGTHVRRTGDIGLF 695


>gi|313618845|gb|EFR90725.1| alanyl-tRNA synthetase [Listeria innocua FSL S4-378]
          Length = 533

 Score = 61.7 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 60/143 (41%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFS 115
            ++++   +  R   +  H+  H++  A++    E     G ++  D   +DF      +
Sbjct: 202 DTVKLAVDKVKRRETIKNHTATHLLHRALKDTLGEHVNQAGSLVSPDRLRFDFSHFGQIT 261

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            +EL ++E+ + E        + + +   +A+EL        K          E V + +
Sbjct: 262 EEELTKMEEIVNEXXWEQINVIIEEMPIAEAKELGAMALFGEKY--------GEVVRVVQ 313

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G++  +LC G HVR+T  +  F
Sbjct: 314 VGKYSIELCGGVHVRNTADIGLF 336


>gi|227431355|ref|ZP_03913408.1| seryl-tRNA synthetase [Leuconostoc mesenteroides subsp. cremoris
           ATCC 19254]
 gi|227352948|gb|EEJ43121.1| seryl-tRNA synthetase [Leuconostoc mesenteroides subsp. cremoris
           ATCC 19254]
          Length = 435

 Score = 61.7 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 70/188 (37%), Gaps = 16/188 (8%)

Query: 272 GWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G ++ + + ++M     ++ Y E+ TP V++      +G +  ++ + + V+  + T   
Sbjct: 178 GARLERAVYNFMLDEHRQEGYTEMITPIVVNDSAMFGTGQYPKFQDDAYRVEGLNQT--- 234

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFT 387
                  P         ++       +LP++       +R E   +     GL+R+  F 
Sbjct: 235 -----YIPTAEVPLTNYYSGEELPSEDLPIKFTALSPSFRKEAGSAGKDTRGLIRLHQFN 289

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +   F   E  + E  K+     +I +       ++ LST              +W  
Sbjct: 290 KVEMVKFTKPEDSYEELEKMTLDAENILQKLNLPYHVIVLSTGDMGFSAAKTYDIEVWMP 349

Query: 444 AENIMKGV 451
            +N+ + +
Sbjct: 350 QQNVYREI 357


>gi|160879109|ref|YP_001558077.1| alanyl-tRNA synthetase [Clostridium phytofermentans ISDg]
 gi|205829960|sp|A9KLZ5|SYA2_CLOPH RecName: Full=Alanyl-tRNA synthetase 2; AltName: Full=Alanine--tRNA
           ligase 2; Short=AlaRS 2
 gi|160427775|gb|ABX41338.1| Alanine--tRNA ligase [Clostridium phytofermentans ISDg]
          Length = 591

 Score = 61.7 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/136 (22%), Positives = 60/136 (44%), Gaps = 11/136 (8%)

Query: 66  DPRSLAVIR-HSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFSSDELAQIE 123
                   R H+  H++  A++++        G  I E+   +DF   +  + +EL ++E
Sbjct: 443 SDHGEQTTRLHTATHLLNGALRTVLGTDVFQRGSNITEERLRFDFSFHRKLTKEELEEVE 502

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ-GEWFDL 182
           + + E I      L + ++ ++A+EL        K          E V +Y   G   ++
Sbjct: 503 RIVNEAIRNQIDVLCEEMTVKEAKELGAVGIFEDKY--------GEVVKVYMIPGYSKEI 554

Query: 183 CRGPHVRSTGQVKKFF 198
           C GPHV++T ++K F 
Sbjct: 555 CGGPHVKNTSELKSFR 570


>gi|314934952|ref|ZP_07842311.1| serine--tRNA ligase [Staphylococcus caprae C87]
 gi|313652882|gb|EFS16645.1| serine--tRNA ligase [Staphylococcus caprae C87]
          Length = 428

 Score = 61.7 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 51/372 (13%), Positives = 125/372 (33%), Gaps = 35/372 (9%)

Query: 91  EVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIAR--DSPFLKQYLSHEKARE 148
           ++++      +     +   + P   DE+ +++++ +++I++  +    +  +S E A++
Sbjct: 3   DIRLFRNEPEKVKSKIELRGDDPKVVDEVLELDEQRRQLISKTEEMKARRNKVSEEIAQK 62

Query: 149 LFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYW 208
               +     +  + ++  +      +  E  +  R   +R    +              
Sbjct: 63  KRNKEDADDVIAEMRNLGDEIKENDAKLNEVDNKVRDILIRIPNLIND-------DVPQG 115

Query: 209 RGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFW 268
             D     L + +GT      E   +   +EE +  D  + A+      +          
Sbjct: 116 DSDEENVELKK-WGTLREFDFEPKAHWDLVEELKMADFERAAKVSGARFVYLTK------ 168

Query: 269 HRKGWKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADD 326
              G  + + L++YM  K   +  Y E+ TPQ+++      +G    +  ++F V     
Sbjct: 169 --DGALLERALMNYMITKHTTQHGYTEMMTPQLVNADTMFGTGQLPKFEEDLFKV----- 221

Query: 327 TIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRV 383
              +       P         +   +     LP +     + +R+E   +     GL+R+
Sbjct: 222 ---EKEGLYTIPTAEVPLTNFYRDEIIQPGVLPEKFTGQTACFRSEAGSAGRDTRGLIRL 278

Query: 384 RGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDA 439
             F + +       E  ++    +     SI ++ G     V L T              
Sbjct: 279 HQFDKVEMVRIEKPEDSWDALEDMTKNAESILEELGLPYRRVILCTGDIGFSASKTYDLE 338

Query: 440 LWDDAENIMKGV 451
           +W  + N  K +
Sbjct: 339 VWLPSYNDYKEI 350


>gi|34762826|ref|ZP_00143812.1| Histidyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
 gi|294784988|ref|ZP_06750276.1| histidine--tRNA ligase [Fusobacterium sp. 3_1_27]
 gi|27887528|gb|EAA24612.1| Histidyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
 gi|294486702|gb|EFG34064.1| histidine--tRNA ligase [Fusobacterium sp. 3_1_27]
          Length = 413

 Score = 61.7 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 61/399 (15%), Positives = 131/399 (32%), Gaps = 63/399 (15%)

Query: 288 KDDYEEINTPQVLDQHLWQ--QSGHWDSYRANMFAVKCADDTIKDLR-TFALKPMNCPGH 344
             +Y  + TP   +  L++       D     M+  K   D    LR       + C   
Sbjct: 34  NYNYNFVKTPIFEETELFKRGIGEATDVVEKEMYTFKDRGDRSITLRPENTASLVRCYLE 93

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
            A++     S      R    GS++R E   +     R R F Q    VF   E+     
Sbjct: 94  NAIYAKEDIS------RFYYNGSMFRYERPQA----GRQREFNQIGIEVFG--EKSPKVD 141

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            ++  +     +  G   + VK+++       +    +      K  LD + +  +DRIN
Sbjct: 142 AEVIAIGYKFLEKLGITDLEVKINSVGSNASRTVYR-EKLVEHFKSHLDDMCDDCKDRIN 200

Query: 465 TGVL-------LGEGAFY--GPKF-EYILKDAIGR----------------DWQCGTIQV 498
              L         +  FY   P   +++ +D                    +       +
Sbjct: 201 RNPLRLLDCKVDKDKDFYKSAPNIIDFLFEDERKHYEDVKKYLDVFGIKYTEDPTLVRGL 260

Query: 499 DFNLPSRFNAFYVN------------SHS---EKCHPVMIHRAVFGSIERFIGIMIENFK 543
           D+   + F                    +   E     +        +ER + ++ EN+ 
Sbjct: 261 DYYSSTVFEIVTNKLGSQGTVLGGGRYDNLLKELGDKDIPAVGFATGVERIMMLLGENYP 320

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
            N P         +  +  +  E A +IA  L+ + + +  D+  + +   +++     +
Sbjct: 321 KNNPD------VYIAWLGENTSETALKIAESLRDNDIKVYIDYSEKGMKSHMKKADKLSV 374

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
              II G+ E ++  + ++ F +   ++V + + +  + 
Sbjct: 375 RYCIILGEDELNKGIVLLKDFSTREQKEVKIEEILNYIK 413


>gi|330832115|ref|YP_004400940.1| histidyl-tRNA synthetase [Streptococcus suis ST3]
 gi|329306338|gb|AEB80754.1| histidyl-tRNA synthetase [Streptococcus suis ST3]
          Length = 427

 Score = 61.7 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 62/421 (14%), Positives = 132/421 (31%), Gaps = 70/421 (16%)

Query: 276 FQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           +Q + ++ R    + +Y EI TP       ++          ++   +  D   K  R  
Sbjct: 20  WQYVENFTRSIFKQYNYAEIRTPIF---EHYEVISRSVGDTTDIVTKEMYDFYDKGERHI 76

Query: 335 ALKPMNCPGHVAVFNHGLKS-----YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
            L+P    G   V    +++       + P +    G ++R E   +     R+R F Q 
Sbjct: 77  TLRP---EGTAPVVRSYVENKLFAPEVQKPAKFYYMGPMFRYERPQA----GRLRQFHQI 129

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK------LSTRPEKRVG------- 436
               F +        ++   +    +++ G + I +         +R   R         
Sbjct: 130 GVECFGSNNPA--TDVETIAMAYHFFEELGIKDIRLHLNSLGNPESRAAYRQALIDYLTP 187

Query: 437 -SDALWDDAENIMKG----VLDTIKNSSQDR-------INTGVLLGEGAFYGPKFEYILK 484
             D L  D++  ++     VLD+ +   +         ++         F   K    + 
Sbjct: 188 LKDQLSKDSQRRLEENPLRVLDSKEKEDKVAVENAPSILDYLDEESTAHFEAVK---TML 244

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSH------------------SEKCHPVMIHRA 526
           D++G  +   T  V          F   +                   +    P      
Sbjct: 245 DSLGIAYVIDTNMVRGLDYYNHTIFEFMTEVGGNDLTICAGGRYDGLVTYFGGPETPAFG 304

Query: 527 VFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF 586
               IER I +++E     LPL  + +   +  +   A   A ++   ++      E D+
Sbjct: 305 FGMGIERLI-LVLEKQGIELPL-DTQLDVYIAVLGQEANGGALDLVQAIRKQGFRAERDY 362

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL----DAIPILT 642
            +  +  + +   +     II  G  E     + ++   + +  + SL     D   IL 
Sbjct: 363 LDRKLKAQFKSADVFGAKAIITLGGSEIESGQVVVKNNQTRSQVETSLEALKTDFASILE 422

Query: 643 K 643
           +
Sbjct: 423 E 423


>gi|321441337|gb|ADW85083.1| glu- + pro-tRNA synthetase [Synemon plana]
          Length = 134

 Score = 61.7 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 48/132 (36%), Gaps = 16/132 (12%)

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
           G  Y    E  +  A GR  Q  T        SR     V    E      +++  +G  
Sbjct: 1   GGDYTTTVEAYVP-ASGRGIQGATSHHLGQNFSRMFEI-VYDDPETQEKKYVYQNSWGIT 58

Query: 532 ERFIGIMI----ENFKGNLPLWLSPIQAIVTT----------ITSSAVEYAQEIANLLKS 577
            R IG+MI    ++    LP  ++ IQ IV                 ++  +++ + L +
Sbjct: 59  TRTIGVMILVHGDDRGLVLPPRVAAIQVIVVPCGITASSTSEDRKKLLDSCKDLVDKLVA 118

Query: 578 HHLSIETDFRNE 589
             L  E D+R+ 
Sbjct: 119 AGLRAEGDYRDN 130


>gi|307243232|ref|ZP_07525403.1| alanine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
 gi|306493360|gb|EFM65342.1| alanine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
          Length = 878

 Score = 61.7 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 56/129 (43%), Gaps = 10/129 (7%)

Query: 71  AVIRHSCAHIMAEAVQSIWPEVQVAIGPIIED-GFYYDFDKEQPFSSDELAQIEKKMQEI 129
           A   H+  H++ +A++ +  +     G ++E     +D    +  + +E++++E  + E 
Sbjct: 561 AARNHTATHLLHKALKEVLGDHVNQAGSLVEPYRLRFDITHFEAMTKEEISRVEAMVNEF 620

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE-WFDLCRGPHV 188
           I    P   + ++  +AR +        K          E V + + G+   +LC G H+
Sbjct: 621 ILEAHPVTAELMNINEARAMGAMALFGEKY--------GEEVRVVKMGDCSVELCGGTHL 672

Query: 189 RSTGQVKKF 197
            +T QV  F
Sbjct: 673 DNTSQVGMF 681


>gi|9107447|gb|AAF85085.1|AE004040_10 seryl-tRNA synthetase [Xylella fastidiosa 9a5c]
          Length = 432

 Score = 61.7 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 67/188 (35%), Gaps = 15/188 (7%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L   M         YEE+N P +++      +G    +  +MF+ +  +     
Sbjct: 177 ARLHRALAQCMLDLHVRQHGYEEVNVPIIVNADSLYGTGQLPKFEEDMFSTQLGEH---- 232

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
            R + +   +      +  + +     LP+R+A     +R+E         G++R   F 
Sbjct: 233 -RRYLIS-TSEISLTNLVRNEIIEADRLPLRMAAHSLCFRSEAGSGGRDTRGMIRQHQFE 290

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALWDD 443
           + +    C  ++   E  ++     ++ +  G     + L T              +W  
Sbjct: 291 KVELVSVCKPQESEGEHQRMTRCAETVLEMLGLPYRKILLCTGDMGFAATKTYDLEVWLP 350

Query: 444 AENIMKGV 451
           ++ + + +
Sbjct: 351 SQGMYREI 358


>gi|161378160|ref|NP_299565.2| seryl-tRNA synthetase [Xylella fastidiosa 9a5c]
 gi|30173217|sp|Q9PB58|SYS_XYLFA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
          Length = 426

 Score = 61.7 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 67/188 (35%), Gaps = 15/188 (7%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L   M         YEE+N P +++      +G    +  +MF+ +  +     
Sbjct: 171 ARLHRALAQCMLDLHVRQHGYEEVNVPIIVNADSLYGTGQLPKFEEDMFSTQLGEH---- 226

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
            R + +   +      +  + +     LP+R+A     +R+E         G++R   F 
Sbjct: 227 -RRYLIS-TSEISLTNLVRNEIIEADRLPLRMAAHSLCFRSEAGSGGRDTRGMIRQHQFE 284

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALWDD 443
           + +    C  ++   E  ++     ++ +  G     + L T              +W  
Sbjct: 285 KVELVSVCKPQESEGEHQRMTRCAETVLEMLGLPYRKILLCTGDMGFAATKTYDLEVWLP 344

Query: 444 AENIMKGV 451
           ++ + + +
Sbjct: 345 SQGMYREI 352


>gi|317163606|gb|ADV07147.1| alanyl-tRNA synthetase [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 885

 Score = 61.7 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 61/143 (42%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFS 115
            S+     ++ R+  +  HS  H+M +A++ +        G  +  +   +D    Q  +
Sbjct: 555 DSVTAKVDDEIRNANMRNHSATHLMHKALRDVLGGHVEQKGSLVTAESTRFDISHPQAVT 614

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           ++E+A++E+++ E +  +       +S E A++         K          + V + +
Sbjct: 615 AEEIAEVERRVNEAVLANVAVNAAIMSMEDAQKTDAMMLFGEKY--------GDEVRVLQ 666

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G +  +LC G HV  TG +  F
Sbjct: 667 MGGFSTELCGGTHVSRTGDIGLF 689


>gi|268594178|ref|ZP_06128345.1| alanyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|268547567|gb|EEZ42985.1| alanyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
          Length = 881

 Score = 61.7 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 61/143 (42%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFS 115
            S+     ++ R+  +  HS  H+M +A++ +        G  +  +   +D    Q  +
Sbjct: 551 DSVTAKVDDEIRNANMRNHSATHLMHKALRDVLGGHVEQKGSLVTAESTRFDISHPQAVT 610

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           ++E+A++E+++ E +  +       +S E A++         K          + V + +
Sbjct: 611 AEEIAEVERRVNEAVLANVAVNAAIMSMEDAQKTDAMMLFGEKY--------GDEVRVLQ 662

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G +  +LC G HV  TG +  F
Sbjct: 663 MGGFSTELCGGTHVSRTGDIGLF 685


>gi|91200885|emb|CAJ73940.1| strongly similar to seryl-tRNA synthetase [Candidatus Kuenenia
           stuttgartiensis]
          Length = 439

 Score = 61.7 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 40/239 (16%), Positives = 76/239 (31%), Gaps = 19/239 (7%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAEDG--SGVIFWHRKGW--KIF 276
           G   +  + +  +          + H +L R +D+  +      +G  F   KG   K+ 
Sbjct: 115 GKDASDNEIVRYWGERKAFHFTPQPHWELGRTLDILDLERAAKITGSGFILLKGAGAKLE 174

Query: 277 QTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK-----CADDTIK 329
           + L ++M         Y EI  P ++++     +G       +M+         A +   
Sbjct: 175 RALFNFMLDIHTRDHGYTEIFPPFLVNRKSMTGTGQLPKLEDDMYRTLQMYTAHASEKKA 234

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGF 386
                 L P        +    +  Y+ LP+    +   +R E         G+MRV  F
Sbjct: 235 VAEDLFLVPTAEVPVTNIHRDEILLYKNLPIYYTAYTPCFRREAGSYGKDTRGIMRVHQF 294

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALW 441
            + +       E  + E   +      I +    E  +VKL T              +W
Sbjct: 295 NKVELVKLVRPETSYGELETLLANAEKILQLLELEYRVVKLCTGDMSFAAAKCYDIEVW 353


>gi|27904784|ref|NP_777910.1| seryl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
 gi|29839436|sp|P59553|SYS_BUCBP RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|27904182|gb|AAO27015.1| seryl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
          Length = 432

 Score = 61.7 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 39/223 (17%), Positives = 81/223 (36%), Gaps = 13/223 (5%)

Query: 242 EKRDHRKLAREMDLFHI--AEDGSGVIFWHRKG--WKIFQTLISYMRRKIKD--DYEEIN 295
           + ++H +L   ++ F    A + SG  F+  KG    +++ L  +M     +   Y E  
Sbjct: 135 KIKNHVELGNHLNGFDWKSAANISGSRFFIMKGKIALLYRVLGQFMLDLHTNEHGYLETY 194

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
            P ++  +    +G    ++ ++F  K   D  ++   FAL P        +F   +   
Sbjct: 195 VPCLVKTNNLYGTGQLPRFKTDLFYAKSLLDESQNNNNFALIPTAEVPLTNLFRDCILDE 254

Query: 356 RELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
           ++LP+ L      +R+E         GL+R   F + +            +  ++     
Sbjct: 255 QQLPIMLVAKTPCFRSEALSYGRDTQGLIRTHQFDKVEIVQIVHPSDSMQKLEELTIHAE 314

Query: 413 SIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
            + K          L TR             +W  ++N+ + V
Sbjct: 315 RVLKLLKLPYRKTLLCTRDIGFSSSKTYDLEVWFPSQNVYREV 357


>gi|310778164|ref|YP_003966497.1| alanyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
 gi|309747487|gb|ADO82149.1| alanyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
          Length = 868

 Score = 61.7 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/150 (21%), Positives = 71/150 (47%), Gaps = 9/150 (6%)

Query: 51  SDPVREGSIEIITPEDPRSLAVIR-HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDF 108
            D +++G    +T +D R   ++R H+  H++ +A++ +        G +++ D   +DF
Sbjct: 533 MDLLKKGLEVTLTVDDERRRDIMRNHTATHLLHKALKDVLGSHVQQAGSLVDADRLRFDF 592

Query: 109 DKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAK 168
              +  + D+L ++EK +   I +++    Q+++ ++A+E   +     K   L  +   
Sbjct: 593 THYEAVTRDQLEEVEKIVNRQIFKNTSLKVQHMTLDEAKESGSTALFGDKYGDLVRV--- 649

Query: 169 ENVTLYRQGEWFDLCRGPHVRSTGQVKKFF 198
               +   G   +LC G HV  TG++  F 
Sbjct: 650 ----VNVPGYSSELCGGIHVDRTGEIGLFN 675


>gi|317126756|ref|YP_004093038.1| seryl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
 gi|315471704|gb|ADU28307.1| seryl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
          Length = 425

 Score = 61.7 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 36/246 (14%), Positives = 86/246 (34%), Gaps = 21/246 (8%)

Query: 219 RIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWK 274
            I  T    ++          + E + H  +A  + +          GS  +F+   G +
Sbjct: 113 PIGATEDENEEVRKWGEVPAFDFEHQAHWDIATNLGILDFERAAKVTGSRFVFYKGLGAR 172

Query: 275 IFQTLISYMRR--KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           + + LI++M    + +  YEEI  P ++++     +G    +  + F ++          
Sbjct: 173 LERALINFMMDLHQDEHGYEEILPPYMVNRDSMTGTGQLPKFEEDAFKIR--------EE 224

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQD 389
            + L P        +    +    ELP     F + +R+E   +     GL+R   F + 
Sbjct: 225 EYFLIPTAEVPVTNLHRDEIMQAEELPKAYTAFSACFRSEAGSAGRDTRGLIRQHQFNKV 284

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAE 445
           +   F   E+ + +  ++ +    + +       ++ + T              +W  + 
Sbjct: 285 ELVRFVKPEESYEQLEQLTSQAEKVLQLLKLPYRVLNMCTGDLGFTAAKKYDIEVWIPSN 344

Query: 446 NIMKGV 451
           N  + +
Sbjct: 345 NAYREI 350


>gi|257792717|ref|YP_003183323.1| seryl-tRNA synthetase [Eggerthella lenta DSM 2243]
 gi|317489004|ref|ZP_07947531.1| seryl-tRNA synthetase [Eggerthella sp. 1_3_56FAA]
 gi|325831041|ref|ZP_08164365.1| serine--tRNA ligase [Eggerthella sp. HGA1]
 gi|257476614|gb|ACV56934.1| seryl-tRNA synthetase [Eggerthella lenta DSM 2243]
 gi|316911871|gb|EFV33453.1| seryl-tRNA synthetase [Eggerthella sp. 1_3_56FAA]
 gi|325486962|gb|EGC89408.1| serine--tRNA ligase [Eggerthella sp. HGA1]
          Length = 429

 Score = 61.7 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 64/189 (33%), Gaps = 17/189 (8%)

Query: 271 KGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
            G ++ + LI++M        Y+E   P + +      +G    +  ++F          
Sbjct: 173 LGARLERALINFMADTHASRGYKEWWCPAMANAETLTGTGQLPKFEEDLFHTT------- 225

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGF 386
                 L P        +    +    +LP++   F   +R E   +     GL+RV  F
Sbjct: 226 --EGLYLIPTAEVQLTNIHAGEVLDAGQLPLKYCAFTPCFREEAGSAGRDTRGLIRVHQF 283

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWD 442
            + +   +   E+ F++   +     +I +  G    ++ L T              +W 
Sbjct: 284 DKVEMVKYAKPEESFDDLEAMVADAENILQLLGLPYRVISLCTGDIGFSAAKTYDLEVWL 343

Query: 443 DAENIMKGV 451
            + N  K +
Sbjct: 344 PSYNGYKEI 352


>gi|226321195|ref|ZP_03796732.1| alanyl-tRNA synthetase [Borrelia burgdorferi 29805]
 gi|226321538|ref|ZP_03797064.1| alanyl-tRNA synthetase [Borrelia burgdorferi Bol26]
 gi|226232727|gb|EEH31480.1| alanyl-tRNA synthetase [Borrelia burgdorferi Bol26]
 gi|226233392|gb|EEH32136.1| alanyl-tRNA synthetase [Borrelia burgdorferi 29805]
          Length = 594

 Score = 61.7 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 54/130 (41%), Gaps = 10/130 (7%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           H+  H++ +A+Q +  +     G  I  +   +DF   +  + DE+ ++E+ +   I   
Sbjct: 456 HTATHLLHKALQLVLGDHVRQKGSNITAERLRFDFVHSEKMTDDEIKKVEEIVNLQIKNS 515

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTG 192
               K  +   +ARE         K          + V++Y    +  ++C GPHV +T 
Sbjct: 516 LSVKKIIMKLSEAREKGAMALFGEKY--------DDLVSVYEIDGFSLEVCGGPHVENTN 567

Query: 193 QVKKFFKLMK 202
           ++  F    +
Sbjct: 568 ELGTFKIQKE 577


>gi|281358189|ref|ZP_06244672.1| seryl-tRNA synthetase [Victivallis vadensis ATCC BAA-548]
 gi|281315279|gb|EFA99309.1| seryl-tRNA synthetase [Victivallis vadensis ATCC BAA-548]
          Length = 415

 Score = 61.7 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 38/212 (17%), Positives = 70/212 (33%), Gaps = 20/212 (9%)

Query: 242 EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRRKI-KDDYEEINT 296
           + RDH++L   +D+  I        +G  +W  KG  + Q L  +++R + +  +    T
Sbjct: 128 KIRDHQELGELLDILDIPRGAKVAATGFYYWKGKGAMLAQALYFWVQRVLVERGFTMFMT 187

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +  +     +G+   +    + +             AL   +    V      +    
Sbjct: 188 PCLAKERTLFGTGYLPFFADQTYNLV--------GEDLALIGTSEQTLVGYHADDVLDGA 239

Query: 357 ELPVRLAEFGSVYRNEPS---GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           ELP+    F   +R E      +  G+ RV  F + +  VFC  E               
Sbjct: 240 ELPLCYTAFTPCFRTEAGSYGKASRGIFRVHQFHKVEQIVFCKPEDSVKYHEMCLANEEY 299

Query: 414 IYKDFGFEKIMVKLSTRPEKRVG----SDALW 441
           I +  G    +V +        G        W
Sbjct: 300 ILQQLGIPYHVVNVCVGDLGAPGYKKYDIEAW 331


>gi|119495835|ref|XP_001264694.1| prolyl-tRNA synthetase [Neosartorya fischeri NRRL 181]
 gi|119412856|gb|EAW22797.1| prolyl-tRNA synthetase [Neosartorya fischeri NRRL 181]
          Length = 441

 Score = 61.7 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 47/105 (44%), Gaps = 7/105 (6%)

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHL---SIETDFRNETINYK 594
           + ++   N P  ++P + +V        E A+++ + L S+H        D R++ + +K
Sbjct: 328 LADSKGLNWPRAMAPYEVVVVPGKGLETE-AEKVYDSLVSNHTSSIDAILDDRDKPMGWK 386

Query: 595 IREHSIKKIPIIIICGD--KEASERSIGIRRFGSTTTQKVSLLDA 637
           + +  +   P+I++ G   K+A    +  RR  +   + V L   
Sbjct: 387 LGDADLIGYPVIVVVGKGWKKAQTLEVQCRRLDNL-REDVPLDQL 430


>gi|312149615|gb|ADQ29686.1| alanyl-tRNA synthetase [Borrelia burgdorferi N40]
          Length = 594

 Score = 61.7 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 54/130 (41%), Gaps = 10/130 (7%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           H+  H++ +A+Q +  +     G  I  +   +DF   +  + DE+ ++E+ +   I   
Sbjct: 456 HTATHLLHKALQLVLGDHVRQKGSNITAERLRFDFVHSEKMTDDEIKKVEEIVNLQIKNS 515

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTG 192
               K  +   +ARE         K          + V++Y    +  ++C GPHV +T 
Sbjct: 516 LSVKKIIMKLSEAREKGAMALFGEKY--------DDLVSVYEIDGFSLEVCGGPHVENTN 567

Query: 193 QVKKFFKLMK 202
           ++  F    +
Sbjct: 568 ELGTFKIQKE 577


>gi|301795047|emb|CBW37512.1| histidyl-tRNA synthetase [Streptococcus pneumoniae INV104]
          Length = 429

 Score = 61.7 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 60/404 (14%), Positives = 126/404 (31%), Gaps = 56/404 (13%)

Query: 276 FQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           +Q +  + R   K  +Y E+ TP       ++          ++   +  D   K  R  
Sbjct: 20  WQYVEGFAREIFKRYNYAEVRTPIF---EHYEVISRSVGDTTDIVTKEMYDFYDKGDRHI 76

Query: 335 ALKPMNCPGHVAVFNHGLKS-----YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
            L+P    G   V    +++       + P +    G ++R E   +     R+R F Q 
Sbjct: 77  TLRP---EGTAPVVRSYVENKLFAPEVQKPSKFYYMGPMFRYERPQA----GRLRQFHQI 129

Query: 390 DAHVFCTKEQM-FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWD------ 442
               F +       E + +    +      G +  +  L     +     AL D      
Sbjct: 130 GVECFGSSNPATDVETIVMAAHFLKEIGIQGVKLHLNTLGNPESRAAYRQALIDYLTPLK 189

Query: 443 -----DAENIMKG----VLDTIKNSSQDR-------INTGVLLGEGAFYGPK-------F 479
                D++  ++     VLD+ +   +         ++      +  F   +        
Sbjct: 190 ETLSKDSQRRLEENPLRVLDSKEKEDKVAVENAPSILDFLDEESQAHFDAVRQMLENLGV 249

Query: 480 EYILKDAI--GRDWQCGTIQVDFNLPSRFNAFYVN---SHSEKCHPVMIHRAVFG---SI 531
           +YI+   +  G D+   TI          +              +      A FG    +
Sbjct: 250 DYIIDTNMVRGLDYYNHTIFEFITEIEGNDLTVCAGGRYDGLVAYFGGPETAGFGFGLGV 309

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           ER + I+    +G      + +   +  +   A   A E+   L+      E D+ N  +
Sbjct: 310 ERLLLIL--EKQGVALPIENALDVYIAVLGDGANVKALELVQTLRQQGFKAERDYLNRKL 367

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
             + +   +     +I  G+ E     + ++   +    +VSL 
Sbjct: 368 KAQFKSADVFAAKTLITLGESEVESGQVTVKNNQTREEVQVSLE 411


>gi|219870880|ref|YP_002475255.1| seryl-tRNA synthetase [Haemophilus parasuis SH0165]
 gi|254783029|sp|B8F4Q5|SYS_HAEPS RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|219691084|gb|ACL32307.1| seryl-tRNA synthetase [Haemophilus parasuis SH0165]
          Length = 434

 Score = 61.7 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/190 (13%), Positives = 62/190 (32%), Gaps = 11/190 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD--DTI 328
            ++ + L  +M     +   Y E   P +++      +G    +  ++F  +  D  D  
Sbjct: 171 ARLHRALSQFMLDLHTEQHGYVETYVPYLVNHDTLYGTGQLPKFGEDLFHTQPLDGQDPN 230

Query: 329 KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRG 385
              + +AL P        +    +     LP++L      +R+E         GL+R+  
Sbjct: 231 AVQKPYALIPTAEVPVTNLVRDEILDEESLPLKLTAHTPCFRSEAGSYGRDTRGLIRMHQ 290

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALW 441
           F + +       E+      ++      + +        + L +              +W
Sbjct: 291 FDKVEMVQIVAPEKSMEALEELTGHAEKVLQLLNLPYRKMLLCSGDMSFGSSKTYDLEVW 350

Query: 442 DDAENIMKGV 451
             A+N  + +
Sbjct: 351 LPAQNTYREI 360


>gi|225549137|ref|ZP_03770112.1| alanyl-tRNA synthetase [Borrelia burgdorferi 94a]
 gi|225370363|gb|EEG99801.1| alanyl-tRNA synthetase [Borrelia burgdorferi 94a]
          Length = 594

 Score = 61.7 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 54/130 (41%), Gaps = 10/130 (7%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           H+  H++ +A+Q +  +     G  I  +   +DF   +  + DE+ ++E+ +   I   
Sbjct: 456 HTATHLLHKALQLVLGDHVRQKGSNITAERLRFDFVHSEKMTDDEIKKVEEIVNLQIKNS 515

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTG 192
               K  +   +ARE         K          + V++Y    +  ++C GPHV +T 
Sbjct: 516 LSVKKIIMKLSEAREKGAMALFGEKY--------DDLVSVYEIDGFSLEVCGGPHVENTN 567

Query: 193 QVKKFFKLMK 202
           ++  F    +
Sbjct: 568 ELGTFKIQKE 577


>gi|195941424|ref|ZP_03086806.1| alanyl-tRNA synthetase [Borrelia burgdorferi 80a]
 gi|221217734|ref|ZP_03589202.1| alanyl-tRNA synthetase [Borrelia burgdorferi 72a]
 gi|223888838|ref|ZP_03623429.1| alanyl-tRNA synthetase [Borrelia burgdorferi 64b]
 gi|225550064|ref|ZP_03771024.1| alanyl-tRNA synthetase [Borrelia burgdorferi 118a]
 gi|221192411|gb|EEE18630.1| alanyl-tRNA synthetase [Borrelia burgdorferi 72a]
 gi|223885654|gb|EEF56753.1| alanyl-tRNA synthetase [Borrelia burgdorferi 64b]
 gi|225369176|gb|EEG98629.1| alanyl-tRNA synthetase [Borrelia burgdorferi 118a]
          Length = 594

 Score = 61.7 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 54/130 (41%), Gaps = 10/130 (7%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           H+  H++ +A+Q +  +     G  I  +   +DF   +  + DE+ ++E+ +   I   
Sbjct: 456 HTATHLLHKALQLVLGDHVRQKGSNITAERLRFDFVHSEKMTDDEIKKVEEIVNLQIKNS 515

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTG 192
               K  +   +ARE         K          + V++Y    +  ++C GPHV +T 
Sbjct: 516 LSVKKIIMKLSEAREKGAMALFGEKY--------DDLVSVYEIDGFSLEVCGGPHVENTN 567

Query: 193 QVKKFFKLMK 202
           ++  F    +
Sbjct: 568 ELGTFKIQKE 577


>gi|148990507|ref|ZP_01821648.1| histidyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
 gi|147924265|gb|EDK75361.1| histidyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
          Length = 426

 Score = 61.7 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 60/404 (14%), Positives = 125/404 (30%), Gaps = 56/404 (13%)

Query: 276 FQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           +Q +  + R   K  +Y E+ TP       ++          ++   +  D   K  R  
Sbjct: 20  WQYVEGFAREIFKRYNYAEVRTPIF---EHYEVISRSVGDTTDIVTKEMYDFYDKGDRHI 76

Query: 335 ALKPMNCPGHVAVFNHGLKS-----YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
            L+P    G   V    +++       + P +    G ++R E   +     R+R F Q 
Sbjct: 77  TLRP---EGTAPVVRSYVENKLFAPEVQKPSKFYYMGPMFRYERPQA----GRLRQFHQI 129

Query: 390 DAHVFCTKEQM-FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWD------ 442
               F +       E + +    +      G +  +  L     +     AL D      
Sbjct: 130 GVECFGSSNPATDVETIAMAAHFLKEIGIQGVKLHLNTLGNPESRAAYRQALIDYLTPLK 189

Query: 443 -----DAENIMKG----VLDTIKNSSQDRINTGV-------LLGEGAFYGPK-------F 479
                D++  ++     VLD+ +   +  +              +  F   +        
Sbjct: 190 ETLSKDSQRRLEENPLRVLDSKEKEDKVAVENVPSILDFLDEESQTHFDAVRQMLENLGV 249

Query: 480 EYILKDAI--GRDWQCGTIQVDFNLPSRFNAFYVN---SHSEKCHPVMIHRAVFG---SI 531
           +YI+   +  G D+   TI          +              +      A FG    +
Sbjct: 250 DYIIDTNMVRGLDYYNHTIFEFITEIEGNDLTVCAGGRYDGLVAYFGGPETAGFGFGLGV 309

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           ER + I+    +G      + +   +  +   A   A E+   L+      E D+ N  +
Sbjct: 310 ERLLLIL--EKQGVALPIENALDVYIAVLGDGANVKALELVQALRQQGFKAERDYLNRKL 367

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
             + +   +     +I  G+ E     + ++   +    +VSL 
Sbjct: 368 KAQFKSADVFAAKTLITLGESEVESGQVTVKNNQTREEVQVSLE 411


>gi|187924517|ref|YP_001896159.1| histidyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
 gi|229558663|sp|B2SXS9|SYH_BURPP RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|187715711|gb|ACD16935.1| histidyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
          Length = 446

 Score = 61.7 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 62/414 (14%), Positives = 122/414 (29%), Gaps = 79/414 (19%)

Query: 289 DDYEEINTPQVLDQHLWQ--QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA 346
             Y+ I TP V    L++       D     M++   A +         ++P N    V 
Sbjct: 42  YGYQNIRTPIVEHTQLFKRGIGEVTDIVEKEMYSFTDALN----GENLTMRPEN-TAAVV 96

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD--DAHVFCTKEQMFNEC 404
                     + P RL   G ++R+E         R R F Q   +A  F   +      
Sbjct: 97  RAAIEHNMLYDGPKRLWYIGPMFRHERPQR----GRYRQFHQVGVEALGFAGPDADA--- 149

Query: 405 LKIHNLIISIYKDFG--------------FEKIMVKLSTRPEKRVGSDALWDDAENIM-- 448
            +I  +   ++ D G               E+   ++          D L ++A+  +  
Sbjct: 150 -EIIMMCQRLWDDLGLMGIKLEINSLGLAEERAAHRVELIAHLEKHMDVLDEEAKRRLYT 208

Query: 449 ---------KGVLDTIKNSSQDRINTGVLLGEGAFYGP-------KFEYILKDAIGRDWQ 492
                       +  +  ++   I+         F G           + +   + R   
Sbjct: 209 NPLRVLDTKNPAMQEVAQNAPKLIDFLGEESRAHFEGLQRILKANNIPFTINPRLVRGLD 268

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIH-------RAVFGS-IERFIGIMIENFKG 544
              + V   +  +  A    +   +  P++            +   IER + ++ E    
Sbjct: 269 YYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQLGGKPTAACGWAMGIERILELLKEEQ-- 326

Query: 545 NLPLWLSPIQ----AIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE--TINYK--IR 596
                L P        V     +A E A  IA  L+   L +      +  T ++K  ++
Sbjct: 327 -----LVPEDEGCDVYVVHQGDAAREQAFIIAERLRDTGLDVILHCSADGQTASFKSQMK 381

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRF-------GSTTTQKVSLLDAIPILTK 643
                     ++ G+ E +  ++G++         G    Q V   D    L  
Sbjct: 382 RADASGAAFAVVLGEDEIANGTVGVKPLRDTNANGGKNEQQNVPAEDLTEFLIN 435


>gi|91792615|ref|YP_562266.1| histidyl-tRNA synthetase [Shewanella denitrificans OS217]
 gi|122968867|sp|Q12PT3|SYH_SHEDO RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|91714617|gb|ABE54543.1| histidyl-tRNA synthetase [Shewanella denitrificans OS217]
          Length = 424

 Score = 61.7 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 65/419 (15%), Positives = 129/419 (30%), Gaps = 64/419 (15%)

Query: 269 HRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
                 ++Q + + +R  +    Y EI TP V    L+++S    +           D  
Sbjct: 15  LPTQSPLWQKVEAVLRSSVSAYGYSEIRTPIVESTDLFKRSIGEVTDIVEKEMYTFED-- 72

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
            ++  +  L+P      V   N     Y +   RL   G ++R+E         R R F 
Sbjct: 73  -RNSDSLTLRPEGTASTVRAGNEHGLLYNQ-EQRLWYMGPMFRHERPQK----GRYRQFH 126

Query: 388 QD--DAHVFCTKEQM---------FNECLKIHNLIISIYKDFGFEKIM--VKLSTRPEKR 434
           Q   + +   T +             + L I   +       G        + +      
Sbjct: 127 QFGVEVYGIGTADIDAEVLMLSARLWQQLGIDEHVSLELNTLGDPSERAAYRDALIAFLE 186

Query: 435 VGSDALWDDAENIMKG----VLD-------TIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
              D L +D++  M      VLD        +   +   ++      +  F        L
Sbjct: 187 QHKDKLDEDSQRRMYSNPLRVLDTKDSQVQALLADAPALMDYLGEESKTHFSTLC---EL 243

Query: 484 KDAIGRDWQCGTI---QVDFNLPSRFNAFY------------------VNSHSEKCHPVM 522
            DA+G  ++        +D+   + F                      V     K  P +
Sbjct: 244 LDAVGIQYRVNPRLVRGLDYYNRTVFEWVTTSLGSQGTVLAGGRYDGLVGQLGGKDTPAV 303

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSH--HL 580
                F      I +++E    N  +    +   VT +  S +  A ++A  L+     L
Sbjct: 304 ----GFAMGLERIVLLLETLGLNQDIAPE-VDVYVTAMGDSCLVEAFKVAQELRQALPGL 358

Query: 581 SIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
            + +      +  +++          II G+ E +   + I+   +   Q++   DA+ 
Sbjct: 359 KVMSHCGGGNVKKQMKRADKSGAAYAIIIGENELANNQVAIKPLRNNNQQELVARDALA 417


>gi|288801194|ref|ZP_06406649.1| serine--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039]
 gi|288331805|gb|EFC70288.1| serine--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039]
          Length = 429

 Score = 61.7 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 33/213 (15%), Positives = 70/213 (32%), Gaps = 20/213 (9%)

Query: 246 HRKLAREMDLFHIA----EDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVL 300
           H  LA++ +L          G+G  F+  K  ++ + L ++   + +   Y E+  P V+
Sbjct: 144 HWDLAKKYNLIDFDLGVKVTGAGFPFYIGKMARLQRALEAFFLEEARKSGYLEVQPPYVV 203

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +            Y       K        L    L P        +F   +   ++LP+
Sbjct: 204 N--------QASGYGTGQLPDKEGQMYHAQLDNLYLIPTAEVPVTNIFRDVILDEKDLPI 255

Query: 361 RLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           +   + + +R E       + GL R+  F + +       E  +    ++   +  + K 
Sbjct: 256 KRCAYSACFRREAGSYGKDVRGLNRLHQFDKVEIVRIDKPEHSYESLKEMLVHVEGLCKK 315

Query: 418 FGFEKIMVKLSTRPEKRV----GSDALWDDAEN 446
                 ++KL                +W  A+ 
Sbjct: 316 LELPYRILKLCGGDMSFTSAICFDFEVWSAAQQ 348


>gi|15903972|ref|NP_359522.1| histidyl-tRNA synthetase [Streptococcus pneumoniae R6]
 gi|116515787|ref|YP_817338.1| histidyl-tRNA synthetase [Streptococcus pneumoniae D39]
 gi|221232832|ref|YP_002511986.1| histidyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669]
 gi|32130105|sp|Q8DN46|SYH_STRR6 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|122277816|sp|Q04I50|SYH_STRP2 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|254782348|sp|B8ZPP6|SYH_STRPJ RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|15459628|gb|AAL00733.1| Histidyl-tRNA synthetase [Streptococcus pneumoniae R6]
 gi|116076363|gb|ABJ54083.1| histidyl-tRNA synthetase [Streptococcus pneumoniae D39]
 gi|220675294|emb|CAR69887.1| histidyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669]
 gi|332198937|gb|EGJ13018.1| histidyl-tRNA synthetase [Streptococcus pneumoniae GA47901]
          Length = 429

 Score = 61.7 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 60/404 (14%), Positives = 126/404 (31%), Gaps = 56/404 (13%)

Query: 276 FQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           +Q +  + R   K  +Y E+ TP       ++          ++   +  D   K  R  
Sbjct: 20  WQYVEGFAREIFKRYNYAEVRTPIF---EHYEVISRSVGDTTDIVTKEMYDFYDKGDRHI 76

Query: 335 ALKPMNCPGHVAVFNHGLKS-----YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
            L+P    G   V    +++       + P +    G ++R E   +     R+R F Q 
Sbjct: 77  TLRP---EGTAPVVRSYVENKLFAPEVQKPSKFYYMGPMFRYERPQA----GRLRQFHQI 129

Query: 390 DAHVFCTKEQM-FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWD------ 442
               F +       E + +    +      G +  +  L     +     AL D      
Sbjct: 130 GVECFGSSNPATDVETIAMAAHFLKEIGIQGVKLHLNTLGNPESRAAYRQALIDYLTPLK 189

Query: 443 -----DAENIMKG----VLDTIKNSSQDR-------INTGVLLGEGAFYGPK-------F 479
                D++  ++     VLD+ +   +         ++      +  F   +        
Sbjct: 190 ETLSKDSQRRLEENPLRVLDSKEKEDKVAVENAPSILDFLDEESQTHFDAVRQMLENLGV 249

Query: 480 EYILKDAI--GRDWQCGTIQVDFNLPSRFNAFYVN---SHSEKCHPVMIHRAVFG---SI 531
           +YI+   +  G D+   TI          +              +      A FG    +
Sbjct: 250 DYIIDTNMVRGLDYYNHTIFEFITEIEGNDLTVCAGGRYDGLVAYFGGPETAGFGFGLGV 309

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           ER + I+    +G      + +   +  +   A   A E+   L+      E D+ N  +
Sbjct: 310 ERLLLIL--EKQGVALPIENALDVYIAVLGDGANVKALELVQALRQQGFKAERDYLNRKL 367

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
             + +   +     +I  G+ E     + ++   +    +VSL 
Sbjct: 368 KAQFKSADVFAAKTLITLGESEVESGQVTVKNNQTREEVQVSLE 411


>gi|329962119|ref|ZP_08300130.1| serine--tRNA ligase [Bacteroides fluxus YIT 12057]
 gi|328530767|gb|EGF57625.1| serine--tRNA ligase [Bacteroides fluxus YIT 12057]
          Length = 424

 Score = 61.7 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 69/198 (34%), Gaps = 16/198 (8%)

Query: 245 DHRKLAREMDLFHIA----EDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQV 299
            H +LA++ DL          G+G   +  KG ++ + LI++ +    K  Y EI  P V
Sbjct: 143 PHWELAKKYDLIDFDLGVKITGAGFPVYKGKGAQLQRALINFFLDEARKSGYTEIMPPTV 202

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           ++            Y       K       ++    L P        ++   +   ++LP
Sbjct: 203 VNA--------ASGYGTGQLPDKEGQMYHCEVDDLYLIPTAEVPVTNIYRDVILDEKQLP 254

Query: 360 VRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           V+   +   +R E       + GL R+  F++ +       E       ++ + +  + +
Sbjct: 255 VKNCAYTQCFRREAGSYGKDVRGLNRLHEFSKVELVRIDKPEHSKQSHQEMLDHVEGLLQ 314

Query: 417 DFGFEKIMVKLSTRPEKR 434
                  +++L       
Sbjct: 315 KLELPYRILRLCGGDMSF 332


>gi|312127607|ref|YP_003992481.1| alanyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
 gi|311777626|gb|ADQ07112.1| alanyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
          Length = 881

 Score = 61.7 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 41/191 (21%), Positives = 80/191 (41%), Gaps = 10/191 (5%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFS 115
            S+     E+ R   +  H+  H++  A++ I  +     G  +  D   +DF   +P S
Sbjct: 546 SSVVAKVDEELRLATMKNHTATHLLHSALRKILGQHAQQSGSQVSPDRLRFDFAHYEPLS 605

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            +++ +IEK +  +I +  P  K     + A  +  +     K   +        V + +
Sbjct: 606 EEQIIEIEKMVNNVIQQAIPVEKIVTDLDSALRMGATALFDEKYSNV--------VRVIK 657

Query: 176 QGEW-FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
            G++  +LC G HV +TGQ+  F  + + + A           +++Y    NTQQ L Q 
Sbjct: 658 IGDFSMELCGGTHVDNTGQIGMFKIISESSVAAGVRRIEAITGNKVYEFILNTQQTLKQL 717

Query: 235 LYFLEESEKRD 245
              ++ S   +
Sbjct: 718 RSKVKASTDSE 728


>gi|227542205|ref|ZP_03972254.1| histidyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51866]
 gi|227182034|gb|EEI63006.1| histidyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51866]
          Length = 420

 Score = 61.7 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 61/409 (14%), Positives = 126/409 (30%), Gaps = 58/409 (14%)

Query: 280 ISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPM 339
            ++     +  +E I  P   D HL+ +         ++   +      +  R+  L+P 
Sbjct: 28  ETFTHEAQRAGFEHIELPIFEDTHLFARG---VGESTDVVTKEMYTFEDRGGRSVTLRPE 84

Query: 340 NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQ 399
              G +           +LPV+L   G  +R E   +     R R   Q         + 
Sbjct: 85  GTAGVMRAVIEHNLDRGQLPVKLVYSGPFFRYERPQA----GRYRQLQQVGVEAIGVDDP 140

Query: 400 MFNECLKIHNLIISIYKDFGFE----------KIMVKLSTRPEKRVG------SDALWDD 443
             +   +I  L    YK  G                + + R + +         +     
Sbjct: 141 ALDA--EIIALADRCYKSVGLTGYRLDLSSLGDAECRPAYREKLQAFLRKLPLDEETQRR 198

Query: 444 AE---------------NIMKGV---LDTIKNSSQDRIN--TGVLLGEGAFYG--PKF-- 479
           AE                ++      LD + NSS++      G+L   G  Y   PK   
Sbjct: 199 AEINPLRVLDDKRPEVQEMLVDAPLLLDHLSNSSREHFEVVKGLLDDFGVSYTINPKLVR 258

Query: 480 --EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
             +Y  K       +    Q       R++        ++   +       G     + +
Sbjct: 259 GLDYYTKTCFEFVHEGLGAQSGIGGGGRYDGLMAQLGGQELSGIGF---GLGVDRTLLAL 315

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
             E      P     +      + S A      + N L++  +S +  + +  +   ++ 
Sbjct: 316 EAEGVSAGSP---RRVDVYGVPLGSEAKRVLAGVVNNLRAAGVSTDMSYGDRGLKGAMKG 372

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
            S       ++ G++E ++ ++ +R   +   + VSL  A+    +E L
Sbjct: 373 ASRSGARYCLVLGEQELADGNVAVRDMNNHEQETVSLS-AVQAFLEERL 420


>gi|216264895|ref|ZP_03436887.1| alanyl-tRNA synthetase [Borrelia burgdorferi 156a]
 gi|215981368|gb|EEC22175.1| alanyl-tRNA synthetase [Borrelia burgdorferi 156a]
 gi|312148018|gb|ADQ30677.1| alanyl-tRNA synthetase [Borrelia burgdorferi JD1]
          Length = 594

 Score = 61.7 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 54/130 (41%), Gaps = 10/130 (7%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           H+  H++ +A+Q +  +     G  I  +   +DF   +  + DE+ ++E+ +   I   
Sbjct: 456 HTATHLLHKALQLVLGDHVRQKGSNITAERLRFDFVHSEKMTDDEIKKVEEIVNLQIKNS 515

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTG 192
               K  +   +ARE         K          + V++Y    +  ++C GPHV +T 
Sbjct: 516 LSVKKIIMKLSEAREKGAMALFGEKY--------DDLVSVYEIDGFSLEVCGGPHVENTN 567

Query: 193 QVKKFFKLMK 202
           ++  F    +
Sbjct: 568 ELGTFKIQKE 577


>gi|314936256|ref|ZP_07843603.1| histidine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
 gi|313654875|gb|EFS18620.1| histidine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
          Length = 425

 Score = 61.7 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 62/425 (14%), Positives = 146/425 (34%), Gaps = 62/425 (14%)

Query: 269 HRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQS--GHWDSYRANMFAVKCAD 325
             +    ++ + + +   +K  +Y+EI TP      L+ +      D  +  M+  K   
Sbjct: 12  LPQESAKWRYIENKLDELMKLYNYKEIRTPIFESTDLFARGVGDSTDVVQKEMYTFKDKG 71

Query: 326 DTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL----PVRLAEFGSVYRNEPSGSLHGLM 381
           D     R+  L+P    G  AV    +++  +     P++L   G ++R E         
Sbjct: 72  D-----RSITLRP---EGTAAVVRSYIENKMQGEPNQPIKLYYNGPMFRYERKQK----G 119

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK---IMVKLSTRPEKRVGSD 438
           R R F Q        +    +   ++  +++ IY+ FG +    ++  +  +  ++  ++
Sbjct: 120 RYRQFNQFGVEAIGAENPSIDA--EVLAMVMHIYESFGLKHLKLVINSIGDQASRKEYNE 177

Query: 439 ALWDDAENIMKGVLDTIKNSSQDR----INTGVL-LGEGAFYGPKFEYILKDAIGRDWQC 493
           AL    E ++    +  ++         ++  +    E   + P+    L D     ++ 
Sbjct: 178 ALMKHFEPVIDTFCNDCQSRLHTNPMRILDCKIDRDKEAVKHAPRITDYLNDESKAYYEA 237

Query: 494 GTIQVDFNL--------------PSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
               +D                      AF +   +      +      G     + ++ 
Sbjct: 238 VKHHLDQLDINYVEDPNLVRGLDYYTHTAFELMMDNPNYDGAITTLCGGGRYNGLLELLD 297

Query: 540 ENFKGNLPLWLS-------------------PIQAIVTTITSSAVEYAQEIANLLKSHHL 580
              +  +   LS                        V T+   A +Y+ ++ N L+ H +
Sbjct: 298 GPKQTGIGFALSIERLLLALEEEDIELNVDEDFDLFVVTMGKKAEQYSVKLLNDLRKHGV 357

Query: 581 SIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
             + D+ N  I  ++++         I+ GD+E +   I ++   +  T+ + L + +  
Sbjct: 358 KADKDYLNRKIKGQMKQADRLNAKYTIVIGDQELNNNKIDVKEMSTGETKTIQLDEVVSF 417

Query: 641 LTKES 645
             KE 
Sbjct: 418 FNKEK 422


>gi|255007813|ref|ZP_05279939.1| seryl-tRNA synthetase [Bacteroides fragilis 3_1_12]
 gi|313145518|ref|ZP_07807711.1| seryl-tRNA synthetase [Bacteroides fragilis 3_1_12]
 gi|313134285|gb|EFR51645.1| seryl-tRNA synthetase [Bacteroides fragilis 3_1_12]
          Length = 424

 Score = 61.7 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 69/198 (34%), Gaps = 16/198 (8%)

Query: 245 DHRKLAREMDLFHIA----EDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQV 299
            H +LA++ DL          G+G   +  KG ++ + LI++ +    K  Y EI  P V
Sbjct: 143 PHWELAKKYDLIDFDLGVKITGAGFPVYKGKGAQLQRALINFFLDEARKSGYTEIMPPTV 202

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           ++            Y       K       ++    L P        ++   +   ++LP
Sbjct: 203 VNA--------ASGYGTGQLPDKEGQMYHCEVDDLYLIPTAEVPVTNIYRDVILDEKQLP 254

Query: 360 VRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ++   +   +R E       + GL R+  F++ +       E       ++ + +  + +
Sbjct: 255 IKNCAYTQCFRREAGSYGKDVRGLNRLHEFSKVELVRIDKPEHSRQSHQEMLDHVEGLLQ 314

Query: 417 DFGFEKIMVKLSTRPEKR 434
                  +++L       
Sbjct: 315 KLELPYRILRLCGGDMSF 332


>gi|261344310|ref|ZP_05971954.1| serine--tRNA ligase [Providencia rustigianii DSM 4541]
 gi|282567914|gb|EFB73449.1| serine--tRNA ligase [Providencia rustigianii DSM 4541]
          Length = 430

 Score = 61.7 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 65/188 (34%), Gaps = 10/188 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M     +   Y+E+  P +++      +G    +  ++F  K  ++   D
Sbjct: 170 ARMHRALAQFMLDLHTEKHGYQELYVPYLVNHDTLYGTGQLPKFGEDLFHTKPLEEEA-D 228

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
             T+AL P        +    +     LP+++      +R+E         GL+R+  F 
Sbjct: 229 SSTYALIPTAEVPVTNLVRDEILDEDALPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFD 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E+      ++      + +        V L T              +W  
Sbjct: 289 KVELVQIVHPEKSMEALEELTGHAEKVLQLLELPYRKVILCTGDIGFGSRKTYDLEVWLP 348

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 349 AQNTYREI 356


>gi|15668403|ref|NP_247199.1| glycyl-tRNA synthetase [Methanocaldococcus jannaschii DSM 2661]
 gi|2500998|sp|Q57681|SYG_METJA RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|1499005|gb|AAB98213.1| glycyl-tRNA synthetase (glyS) [Methanocaldococcus jannaschii DSM
           2661]
          Length = 577

 Score = 61.7 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 17/96 (17%), Positives = 39/96 (40%), Gaps = 3/96 (3%)

Query: 550 LSPIQAIVTT--ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIII 607
           ++PI+A V          + A+EI  +L+ + +  E D     I  +        +P  I
Sbjct: 479 IAPIKAYVLPLVNKDDMPKIAKEIEQMLRENGIIAEYDDSGA-IGRRYMRADEIGVPFCI 537

Query: 608 ICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
               +   +R++ +R   +    +V + + +  L +
Sbjct: 538 TVDGQTLEDRTVTVRERNTREQVRVKIDELVDYLKE 573



 Score = 43.6 bits (101), Expect = 0.10,   Method: Composition-based stats.
 Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 2/78 (2%)

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRE-LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
            RT  ++P    G    F    + +R  LP  + + G  YRNE S    G++R+R FTQ 
Sbjct: 156 KRTGYMRPETAQGIFIQFRRLAQFFRNKLPFGVVQIGKSYRNEISPR-QGVIRLREFTQA 214

Query: 390 DAHVFCTKEQMFNECLKI 407
           +   F   E+  +E   +
Sbjct: 215 EIEYFVHPERKEHEKFDL 232


>gi|330684847|gb|EGG96537.1| alanine--tRNA ligase [Staphylococcus epidermidis VCU121]
          Length = 876

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 28/150 (18%), Positives = 62/150 (41%), Gaps = 10/150 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFS 115
             ++    +D R      HS  H++  A++ +  +     G ++E +   +DF      +
Sbjct: 547 AEVDASVNKDERRSIQKNHSATHLLHAALKEVLGDHVNQAGSLVEPNRLRFDFSHFGQMT 606

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            DE+ Q+E+++ E I R      Q ++ ++A+ +        K          + V +  
Sbjct: 607 QDEINQVERRVNEEIWRGIDVRIQEMNIDEAKAMGAMALFGEKY--------GDVVRVVN 658

Query: 176 QGEW-FDLCRGPHVRSTGQVKKFFKLMKVA 204
              +  +LC G HV +T ++  F  + +  
Sbjct: 659 MAPFSIELCGGIHVENTAEIGLFKIVSESG 688


>gi|308389728|gb|ADO32048.1| alanyl-tRNA synthetase [Neisseria meningitidis alpha710]
          Length = 885

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 62/143 (43%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFS 115
            S+     ++ R+  +  HS  H+M +A++ +  E     G  +  +   +D    Q  +
Sbjct: 555 DSVTAKVDDEIRNANMRNHSATHLMHKALRDVLGEHVEQKGSLVTAESTRFDISHPQAVT 614

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           ++E+A++E+++ E I  +       +S E A++         K          + V + +
Sbjct: 615 AEEIAEVERRVNEAILANVAVNAAIMSMEDAQKTGAMMLFGEKY--------GDEVRVLQ 666

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G +  +LC G HV  TG +  F
Sbjct: 667 MGGFSTELCGGTHVSRTGDIGLF 689


>gi|304386989|ref|ZP_07369247.1| alanine--tRNA ligase [Neisseria meningitidis ATCC 13091]
 gi|304338946|gb|EFM05042.1| alanine--tRNA ligase [Neisseria meningitidis ATCC 13091]
          Length = 885

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 62/143 (43%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFS 115
            S+     ++ R+  +  HS  H+M +A++ +  E     G  +  +   +D    Q  +
Sbjct: 555 DSVTAKVDDEIRNANMRNHSATHLMHKALRDVLGEHVEQKGSLVTAESTRFDISHPQAVT 614

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           ++E+A++E+++ E I  +       +S E A++         K          + V + +
Sbjct: 615 AEEIAEVERRVNEAILANVAVNAAIMSMEDAQKTGAMMLFGEKY--------GDEVRVLQ 666

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G +  +LC G HV  TG +  F
Sbjct: 667 MGGFSTELCGGTHVSRTGDIGLF 689


>gi|259488480|tpe|CBF87946.1| TPA: prolyl-tRNA synthetase (AFU_orthologue; AFUA_1G10750)
           [Aspergillus nidulans FGSC A4]
          Length = 427

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 27/161 (16%), Positives = 64/161 (39%), Gaps = 11/161 (6%)

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI---MIENFKGNLPLW 549
             T  +         A  VNS +++  P+ +     G       +   + +    N P  
Sbjct: 268 GHTFHLGTRYSEVLKARIVNSENDRV-PMQMGCHGIGVSRMITAVADSLADAKGLNWPKI 326

Query: 550 LSPIQAIVTTITSSAVEYAQEIANLL---KSHHLSIETDFRNETINYKIREHSIKKIPII 606
           ++P + ++     +  + A  + +LL   K+  + +  D R++T  +K+ +  +   P+I
Sbjct: 327 IAPWEVVIVPAPGNQED-ALGVYDLLASDKASPIDVLLDDRDKTTGWKLGDADLIGYPVI 385

Query: 607 IICGDKEASERSIGIRRFGSTTTQKVS---LLDAIPILTKE 644
           ++ G+   + R + ++       Q V    LL  +  L  +
Sbjct: 386 VVVGNGWKTNRILEVQCRRLGIRQDVPDGGLLPFVQSLLAQ 426


>gi|241759977|ref|ZP_04758075.1| alanine--tRNA ligase [Neisseria flavescens SK114]
 gi|241319431|gb|EER55861.1| alanine--tRNA ligase [Neisseria flavescens SK114]
          Length = 874

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 62/143 (43%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFS 115
            S+     ++ R+  +  HS  H+M +A++ +  E     G  +  +   +D    Q  +
Sbjct: 544 DSVTAKVDDEIRNANMRNHSATHLMHKALRDVLGEHVEQKGSLVTAESTRFDISHPQAVT 603

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           ++E+A++E+++ E I  +       +S E A++         K          + V + +
Sbjct: 604 AEEIAEVERRVNEAILANVAVNAAIMSMEDAQKTGAMMLFGEKY--------GDEVRVLQ 655

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G +  +LC G HV  TG +  F
Sbjct: 656 MGGFSTELCGGTHVSRTGDIGLF 678


>gi|189219734|ref|YP_001940375.1| Seryl-tRNA synthetase [Methylacidiphilum infernorum V4]
 gi|238692085|sp|B3DX68|SYS_METI4 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|189186592|gb|ACD83777.1| Seryl-tRNA synthetase [Methylacidiphilum infernorum V4]
          Length = 421

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 38/235 (16%), Positives = 79/235 (33%), Gaps = 21/235 (8%)

Query: 220 IYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDL----FHIAEDGSGVIFWHRKGWKI 275
             G     +   T           + H +L RE+ +          GSG   +   G K+
Sbjct: 114 PTGGPEANKVVKTWGEPRQANFPLKTHWELGRELGILDLERGAKLSGSGFSLFTGNGAKL 173

Query: 276 FQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
            + LI +M     +   Y+E+  P ++ +   + +GH   +  +M+A         D   
Sbjct: 174 QRALIQFMLTIHTEEHGYKELWPPYLVTEDCMRGTGHLPKFALDMYAT--------DKDN 225

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDD 390
             L P             + +   LP+R   +   +R E   +     GL+R+  F + +
Sbjct: 226 LYLIPTGEVPLTNFHRDEILAESSLPLRYVAYTPCFRREAGSAGKDTRGLLRLHQFDKVE 285

Query: 391 AHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALW 441
                  E  +    ++ +   +I +       +V L+++             +W
Sbjct: 286 LVQITKPENSYTALEEMVSHAENILRSLNLCYRVVLLASQDMGFGAAKCYDLEVW 340


>gi|67518071|ref|XP_658805.1| hypothetical protein AN1201.2 [Aspergillus nidulans FGSC A4]
 gi|40746638|gb|EAA65794.1| hypothetical protein AN1201.2 [Aspergillus nidulans FGSC A4]
          Length = 416

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 27/161 (16%), Positives = 64/161 (39%), Gaps = 11/161 (6%)

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI---MIENFKGNLPLW 549
             T  +         A  VNS +++  P+ +     G       +   + +    N P  
Sbjct: 257 GHTFHLGTRYSEVLKARIVNSENDRV-PMQMGCHGIGVSRMITAVADSLADAKGLNWPKI 315

Query: 550 LSPIQAIVTTITSSAVEYAQEIANLL---KSHHLSIETDFRNETINYKIREHSIKKIPII 606
           ++P + ++     +  + A  + +LL   K+  + +  D R++T  +K+ +  +   P+I
Sbjct: 316 IAPWEVVIVPAPGNQED-ALGVYDLLASDKASPIDVLLDDRDKTTGWKLGDADLIGYPVI 374

Query: 607 IICGDKEASERSIGIRRFGSTTTQKVS---LLDAIPILTKE 644
           ++ G+   + R + ++       Q V    LL  +  L  +
Sbjct: 375 VVVGNGWKTNRILEVQCRRLGIRQDVPDGGLLPFVQSLLAQ 415


>gi|294501349|ref|YP_003565049.1| alanyl-tRNA synthetase [Bacillus megaterium QM B1551]
 gi|294351286|gb|ADE71615.1| alanyl-tRNA synthetase [Bacillus megaterium QM B1551]
          Length = 877

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 77/196 (39%), Gaps = 20/196 (10%)

Query: 12  GSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIEIITPEDP-RSL 70
           G+I++    A   DV ++   +          NG++        +G I   T ++  RS 
Sbjct: 511 GTIQSAAGTAEVKDVQKA--PNGQNVQTVAVTNGELV-------KGEIYTATLDEENRSA 561

Query: 71  AVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
            V  H+  H++ +A++          G  +  D   +DF      + +EL +IE+ + E 
Sbjct: 562 IVKNHTATHLLHQALKDTLGTHVNQAGSLVTADRLRFDFSHFGQVTQEELEKIEQIVNEK 621

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHV 188
           I        +  + ++A+ +        K          + V + + G++  +LC G HV
Sbjct: 622 IWDSISVQIENKAIDEAKAMGAMALFGEKY--------GDIVRVVQVGDYSLELCGGCHV 673

Query: 189 RSTGQVKKFFKLMKVA 204
            +T  +  F  + +  
Sbjct: 674 PNTSVIGLFKIVSESG 689


>gi|317154429|ref|YP_004122477.1| alanyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
 gi|316944680|gb|ADU63731.1| alanyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
          Length = 879

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/148 (19%), Positives = 64/148 (43%), Gaps = 11/148 (7%)

Query: 53  PVREGSIEIITPEDPRSLAVIR-HSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDK 110
            ++ G+   +T +  + LA +R H+  H++  A+Q +  +     G ++  D   +DF  
Sbjct: 546 ELKPGNSVFLTVDRGQRLATMRNHTVTHLLHAALQKVLGDHARQAGSLVGPDRLRFDFTH 605

Query: 111 EQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN 170
            +  + +E+ ++E  + + I    P  ++ +S E+A        +      L      + 
Sbjct: 606 IKGLTVEEIGRVETLVNQSILDAIPVSREVMSIEQA--------QTKGATALFGEKYGDT 657

Query: 171 VTLYRQ-GEWFDLCRGPHVRSTGQVKKF 197
           V++    G   + C G H+ +TG    F
Sbjct: 658 VSVIEVPGVSMEFCGGTHLDNTGIAGSF 685


>gi|264679951|ref|YP_003279860.1| seryl-tRNA synthetase [Comamonas testosteroni CNB-2]
 gi|299531457|ref|ZP_07044865.1| seryl-tRNA synthetase [Comamonas testosteroni S44]
 gi|262210466|gb|ACY34564.1| seryl-tRNA synthetase [Comamonas testosteroni CNB-2]
 gi|298720620|gb|EFI61569.1| seryl-tRNA synthetase [Comamonas testosteroni S44]
          Length = 438

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 64/191 (33%), Gaps = 12/191 (6%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK- 329
            ++ + L  +M     +   Y E   P +++    + +G    +  ++FA +      + 
Sbjct: 174 ARLHRALAQFMLDLQTEQHGYTECYVPYIVNSDSLKGTGQLPKFEGDLFAAQKGGQDAEP 233

Query: 330 --DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVR 384
             D     L P        +    + +   LP++L      +R+E         GL+R  
Sbjct: 234 LPDTAALYLIPTAEVPLTNLVRDEVLAEDRLPIKLTAHSPCFRSEAGSGGRDTRGLIRQH 293

Query: 385 GFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDAL 440
            F + +       E+ +    ++     ++ +  G    ++ L T              +
Sbjct: 294 QFDKVEMVQIVHPEKSYEALEEMTGHAEAVLQKLGLPYRVMSLCTGDMGFGSAKTYDLEV 353

Query: 441 WDDAENIMKGV 451
           W  A+   + +
Sbjct: 354 WVPAQGTYREI 364


>gi|257460194|ref|ZP_05625298.1| seryl-tRNA synthetase [Campylobacter gracilis RM3268]
 gi|257442635|gb|EEV17774.1| seryl-tRNA synthetase [Campylobacter gracilis RM3268]
          Length = 416

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 28/189 (14%), Positives = 66/189 (34%), Gaps = 14/189 (7%)

Query: 271 KGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
            G K+   LI+YM        +E +N P ++   +   +G    ++ +++ V        
Sbjct: 169 LGAKLNMALINYMIEFNNSRGFELVNMPFLVRDQILYGTGQLPKFKDDLYHVDD------ 222

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGF 386
           + +   L P +      +F+  +    ELP++L  +   +R E   +     G++R   F
Sbjct: 223 EEQNLYLIPTSEVTATNLFSDEILRSEELPIKLTSYSHCFRKEAGSAGRDTRGMIRQHQF 282

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG----SDALWD 442
            + +       E       ++ +    +    G     + L +              +W 
Sbjct: 283 EKVELVAITRPEDSAKMLEEMISCASDLLASLGLPHRHMLLCSGDLGFSAAKTVDLEVWL 342

Query: 443 DAENIMKGV 451
             +N  + +
Sbjct: 343 PGQNQYREI 351


>gi|221065437|ref|ZP_03541542.1| seryl-tRNA synthetase [Comamonas testosteroni KF-1]
 gi|220710460|gb|EED65828.1| seryl-tRNA synthetase [Comamonas testosteroni KF-1]
          Length = 438

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 64/191 (33%), Gaps = 12/191 (6%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK- 329
            ++ + L  +M     +   Y E   P +++    + +G    +  ++FA +      + 
Sbjct: 174 ARLHRALAQFMLDLQTEQHGYTECYVPYIVNSDSLKGTGQLPKFEGDLFAAQKGGQDAEP 233

Query: 330 --DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVR 384
             D     L P        +    + +   LP++L      +R+E         GL+R  
Sbjct: 234 LPDTAALYLIPTAEVPLTNLVRDEVLAEDRLPIKLTAHSPCFRSEAGSGGRDTRGLIRQH 293

Query: 385 GFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDAL 440
            F + +       E+ +    ++     ++ +  G    ++ L T              +
Sbjct: 294 QFDKVEMVQIVHPEKSYEALEEMTGHAEAVLQKLGLPYRVMSLCTGDMGFGAAKTYDLEV 353

Query: 441 WDDAENIMKGV 451
           W  A+   + +
Sbjct: 354 WVPAQGTYREI 364


>gi|289434784|ref|YP_003464656.1| hypothetical protein lse_1419 [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289171028|emb|CBH27570.1| alaS [Listeria seeligeri serovar 1/2b str. SLCC3954]
          Length = 879

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 79/212 (37%), Gaps = 11/212 (5%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFS 115
            ++++   +  R   V  H+  H++  A++    E     G ++  D   +DF      +
Sbjct: 548 DTVKLSVNKVKRRETVKNHTATHLLHRALKDTLGEHVNQAGSLVSPDRLRFDFSHFGQIT 607

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            +EL ++E+ + + I      + + +   +A+EL        K          + V + +
Sbjct: 608 EEELTKMEEIVNKKIWEQIAVVIEEMPIAEAKELGAMALFGEKY--------GDIVRVVQ 659

Query: 176 QGEW-FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
            G++  +LC G HVR+T  +  F  + +                  Y      +  L   
Sbjct: 660 VGKYSIELCGGVHVRNTADIGLFKIVSETGIGAGTRRIEAVTGKAAYHFVTEQENTLKHA 719

Query: 235 LYFLEESEKRDHRKLA-REMDLFHIAEDGSGV 265
              L+ + K   +K+   + DL  +  +   +
Sbjct: 720 ANLLKTTTKETPQKIELLQADLREVRRENDSL 751


>gi|15834727|ref|NP_296486.1| seryl-tRNA synthetase [Chlamydia muridarum Nigg]
 gi|270284894|ref|ZP_06194288.1| seryl-tRNA synthetase [Chlamydia muridarum Nigg]
 gi|270288922|ref|ZP_06195224.1| seryl-tRNA synthetase [Chlamydia muridarum Weiss]
 gi|13878799|sp|Q9PLJ7|SYS_CHLMU RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|7190137|gb|AAF38982.1| seryl-tRNA synthetase [Chlamydia muridarum Nigg]
          Length = 428

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 39/242 (16%), Positives = 84/242 (34%), Gaps = 18/242 (7%)

Query: 210 GDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWH 269
            D +   + + +G           ++   E+ +  D +  A+       A    GV+   
Sbjct: 115 PDKSGNKIIKSHGEIPTFTFPPKHHVQLNEKLQILDFKLPAKTSGSGWPAYKNEGVL--- 171

Query: 270 RKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
              W +   L++   ++    ++    P ++ + +   SG    +    + V+  +    
Sbjct: 172 -LEWALLTYLLN---KQQAHGFQLWLPPLLVKRDILFGSGQIPKFDGQYYRVEDGE---- 223

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPS---GSLHGLMRVRGF 386
             ++  L P          +  + + ++LP+  A F   +R E         GL+RV  F
Sbjct: 224 --QSLFLIPTAEVVLNGFHSQEILNEQDLPLYYAAFTPCFRREAGAGGSHERGLVRVHQF 281

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
            + +   F T EQ      K+  ++  I  +      +  LST          +  DAE 
Sbjct: 282 HKVEMFAFTTPEQEEIAYQKMIGIVEEILSELQLPYQLSLLSTGDMSFTAKKTI--DAEV 339

Query: 447 IM 448
            +
Sbjct: 340 WL 341


>gi|332288166|ref|YP_004419018.1| seryl-tRNA synthetase [Gallibacterium anatis UMN179]
 gi|330431062|gb|AEC16121.1| seryl-tRNA synthetase [Gallibacterium anatis UMN179]
          Length = 428

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 64/188 (34%), Gaps = 13/188 (6%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M     +   Y E+  P +++      +G    +  ++F  K  +     
Sbjct: 171 ARLHRALAQFMLDLHTEQHGYLEMYVPYLVNHETLYGTGQLPKFGEDLFHTKPLEGE--- 227

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
            + +AL P             +    +LP+++      +R+E         GL+R+  F 
Sbjct: 228 -QPYALIPTAEVPVTNTVRGEILGAEDLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFD 286

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E+  +   ++      + +  G     V L T              +W  
Sbjct: 287 KVELVQIVEPEKSMDALEELTGHAEKVLQLLGLPYRKVLLCTGDMGFGSCKTYDLEVWVP 346

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 347 AQNTYREI 354


>gi|228941556|ref|ZP_04104105.1| Alanyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228974486|ref|ZP_04135053.1| Alanyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228981080|ref|ZP_04141381.1| Alanyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228778621|gb|EEM26887.1| Alanyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228785203|gb|EEM33215.1| Alanyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228818112|gb|EEM64188.1| Alanyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|326942170|gb|AEA18066.1| alanyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 880

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 66/161 (40%), Gaps = 15/161 (9%)

Query: 44  NGK-----VCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP 98
           NG+     V +     ++ +++ I     RS  V  H+  H++ +A++ +        G 
Sbjct: 531 NGQNLHKVVVEEGTLTKDAAVKAIIDTKNRSSVVKNHTATHLLHQALKDVLGTHVNQAGS 590

Query: 99  -IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAY 157
            +  +   +DF       +DEL +IE+ + E I           + E+A+E+        
Sbjct: 591 LVTSERLRFDFSHFGQVQADELEKIERMVNEKIWESIDVEISQKAIEEAKEMGAMALFGE 650

Query: 158 KVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
           K          + V + + G++  +LC G HV +T  +  F
Sbjct: 651 KY--------GDVVRVVQVGDYSLELCGGCHVDNTASIGIF 683


>gi|53712299|ref|YP_098291.1| seryl-tRNA synthetase [Bacteroides fragilis YCH46]
 gi|60680477|ref|YP_210621.1| seryl-tRNA synthetase [Bacteroides fragilis NCTC 9343]
 gi|253563663|ref|ZP_04841120.1| seryl-tRNA synthetase [Bacteroides sp. 3_2_5]
 gi|265762490|ref|ZP_06091058.1| seryl-tRNA synthetase [Bacteroides sp. 2_1_16]
 gi|52215164|dbj|BAD47757.1| seryl-tRNA synthetase [Bacteroides fragilis YCH46]
 gi|60491911|emb|CAH06670.1| putative seryl-tRNA synthetase [Bacteroides fragilis NCTC 9343]
 gi|251947439|gb|EES87721.1| seryl-tRNA synthetase [Bacteroides sp. 3_2_5]
 gi|263255098|gb|EEZ26444.1| seryl-tRNA synthetase [Bacteroides sp. 2_1_16]
 gi|301162011|emb|CBW21555.1| putative seryl-tRNA synthetase [Bacteroides fragilis 638R]
          Length = 424

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 69/198 (34%), Gaps = 16/198 (8%)

Query: 245 DHRKLAREMDLFHIA----EDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQV 299
            H +LA++ DL          G+G   +  KG ++ + LI++ +    K  Y EI  P V
Sbjct: 143 PHWELAKKYDLIDFDLGVKITGAGFPVYKGKGAQLQRALINFFLDEARKSGYTEIMPPTV 202

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           ++            Y       K       ++    L P        ++   +   ++LP
Sbjct: 203 VNA--------ASGYGTGQLPDKEGQMYHCEVDDLYLIPTAEVPVTNIYRDVILDEKQLP 254

Query: 360 VRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ++   +   +R E       + GL R+  F++ +       E       ++ + +  + +
Sbjct: 255 IKNCAYTQCFRREAGSYGKDVRGLNRLHEFSKVELVRIDKPEHSRQSHQEMLDHVEGLLQ 314

Query: 417 DFGFEKIMVKLSTRPEKR 434
                  +++L       
Sbjct: 315 KLELPYRILRLCGGDMSF 332


>gi|20807697|ref|NP_622868.1| alanyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
 gi|22096187|sp|Q8RAH4|SYA_THETN RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|20516247|gb|AAM24472.1| Alanyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
          Length = 878

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 62/140 (44%), Gaps = 10/140 (7%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEK 124
             R  A   H+  H++ +A++ +  +     G ++  D   +DF   Q  S +EL +IE+
Sbjct: 555 SKRKGAARNHTATHLLHKALKEVLGDHVNQSGSLVAYDRLRFDFSHYQAVSKEELKKIEE 614

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLC 183
           ++ E I    P + +  ++E A +         K          + V + +  ++  +LC
Sbjct: 615 RVNEKIYEQLPVVVEEKNYEDALKEGAVALFTEKY--------GDKVRVVKIDDYSMELC 666

Query: 184 RGPHVRSTGQVKKFFKLMKV 203
            G HV++T ++  F  + + 
Sbjct: 667 GGTHVKNTSEIGIFKIVSES 686


>gi|15594565|ref|NP_212354.1| alanyl-tRNA synthetase [Borrelia burgdorferi B31]
 gi|6707746|sp|O51238|SYA_BORBU RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|2688110|gb|AAC66604.1| alanyl-tRNA synthetase (alaS) [Borrelia burgdorferi B31]
          Length = 594

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 54/130 (41%), Gaps = 10/130 (7%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           H+  H++ +A+Q +  +     G  I  +   +DF   +  + DE+ ++E+ +   I   
Sbjct: 456 HTATHLLHKALQLVLGDHVRQKGSNITAERLRFDFVHSEKMTDDEIKKVEEIVNLQIKNS 515

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTG 192
               K  +   +ARE         K          + V++Y    +  ++C GPHV +T 
Sbjct: 516 LSVKKIIMELSEAREKGAMALFGEKY--------DDLVSVYEIDGFSLEVCGGPHVENTN 567

Query: 193 QVKKFFKLMK 202
           ++  F    +
Sbjct: 568 ELGTFKIQKE 577


>gi|113461218|ref|YP_719287.1| seryl-tRNA synthetase [Haemophilus somnus 129PT]
 gi|123132161|sp|Q0I471|SYS_HAES1 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|112823261|gb|ABI25350.1| seryl-tRNA synthetase [Haemophilus somnus 129PT]
          Length = 429

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 65/188 (34%), Gaps = 13/188 (6%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M     +   Y E   P +++      +G    +   +F +K  ++    
Sbjct: 171 ARMHRALAQFMLDLHTEQHGYTEAYVPYLVNHATLYGTGQLPKFGEELFHIKPLENE--- 227

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
            +T+AL P        +    +    +LP+++      +R+E         GL+R+  F 
Sbjct: 228 -QTYALIPTAEVPVTNLVRDEIIDEADLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFD 286

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E+      ++ N    + +        V L T              +W  
Sbjct: 287 KVELVQIVEPEKSMEALEELTNQAEKVLQLLNLPYRKVLLCTGDMGFGATKTYDLEVWIP 346

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 347 AQNTYREI 354


>gi|238749782|ref|ZP_04611287.1| Seryl-tRNA synthetase [Yersinia rohdei ATCC 43380]
 gi|238712437|gb|EEQ04650.1| Seryl-tRNA synthetase [Yersinia rohdei ATCC 43380]
          Length = 430

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 60/188 (31%), Gaps = 10/188 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M     +   Y E   P +++      +     +  ++F  K  ++   D
Sbjct: 170 ARMHRALAQFMLDLHTEKHGYLETYVPYLVNHATLYGTAQLPKFGGDLFHTKPLEEE-SD 228

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG---SLHGLMRVRGFT 387
              +AL P        +    +     LP+++      +R E         GL+R+  F 
Sbjct: 229 SSNYALIPTAEVPVTNLVRDEILEEDSLPLKMTAHTPCFRAEAGTYGRDTRGLIRMHQFD 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E       ++      + +  G     V L T              +W  
Sbjct: 289 KVEMVQITRPEDSMAALEELTGHAEKVLQLLGLPYRKVLLCTGDMGFGSSKTYDLEVWLP 348

Query: 444 AENIMKGV 451
           A++  + +
Sbjct: 349 AQDTYREI 356


>gi|75676717|ref|YP_319138.1| histidyl-tRNA synthetase [Nitrobacter winogradskyi Nb-255]
 gi|74421587|gb|ABA05786.1| histidyl-tRNA synthetase [Nitrobacter winogradskyi Nb-255]
          Length = 547

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 48/225 (21%), Positives = 81/225 (36%), Gaps = 30/225 (13%)

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDR-------INTGVLLGEGAFYGPKFEYIL--- 483
           R G D LW+ AE     +L+     +  R       I+  V+ G   + GP FE  L   
Sbjct: 313 RQGCDELWEIAE-----LLEAGGYGATSRNPDVRVIIDPSVVRGLEYYTGPVFEVELLLK 367

Query: 484 -KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF 542
            KD  GR  + G++        R++        E   PV       G   R    +    
Sbjct: 368 TKDEKGRPVRFGSVGGGG----RYDDLVSRFRGE---PVPATGFSIGVS-RLQAALT--M 417

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRN--ETINYKIREHSI 600
            G L     P   +VT        Y + +A+ L++  +  E    N   ++  +++    
Sbjct: 418 LGKLDTKPQPGPVVVTVFGGDIAGYQKMVAD-LRNAGIRAELYLGNPKHSLGQQMKYADK 476

Query: 601 KKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           +  P  II G  E +   + I+   +      S+ D    L K++
Sbjct: 477 RNSPCAIIQGTDEKANGKVLIKDLIAGA-GLTSIEDRAEYLKKQA 520


>gi|332882047|ref|ZP_08449682.1| histidine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
 gi|332679971|gb|EGJ52933.1| histidine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
          Length = 454

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 11/77 (14%), Positives = 31/77 (40%)

Query: 567 YAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS 626
           Y   +    +   +  E    +  +  ++   + K +P + I G+ E +E  + ++   +
Sbjct: 378 YCLPVMAQARQAGVRCEIYPDSAKMKKQMSYANAKAVPFVAIVGENEMNEGKVTLKNMAT 437

Query: 627 TTTQKVSLLDAIPILTK 643
                ++  + I I+ K
Sbjct: 438 GEQSLLTPDEMINIIKK 454


>gi|290476264|ref|YP_003469168.1| alanyl-tRNA synthetase [Xenorhabdus bovienii SS-2004]
 gi|289175601|emb|CBJ82404.1| alanyl-tRNA synthetase [Xenorhabdus bovienii SS-2004]
          Length = 887

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 69/168 (41%), Gaps = 16/168 (9%)

Query: 39  VAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP 98
           +   ING + ++++ +    I  +  +  R    + HS  H++  A++ I  E     G 
Sbjct: 546 IGKLINGTL-NVNNTIN-AEINRVRRDSIR----LNHSATHLLHAALRQILGEHVSQKGS 599

Query: 99  IIEDGF-YYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAY 157
           ++ D +  +DF   +    +++ Q+E  + E I ++   + + +  E+A+          
Sbjct: 600 LVNDKYLRFDFSHFEAMKLEQIRQVENLVNEEIRKNLSIVTELMELEEAKTKGAMALFGE 659

Query: 158 KVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKFFKLMKVA 204
           K          E V +   G++  +LC G H   TG +  F    +  
Sbjct: 660 KY--------DEQVRVLSMGDFSTELCGGTHASRTGDIGLFRISSESG 699


>gi|256751428|ref|ZP_05492306.1| seryl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
 gi|256749647|gb|EEU62673.1| seryl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
          Length = 423

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 36/234 (15%), Positives = 82/234 (35%), Gaps = 22/234 (9%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHI----AEDGSGVIFWHRKGWKIF 276
           G +     E+ ++    +   E + H ++  E+ +          GS   F+   G ++ 
Sbjct: 114 GDSDEDNVEIRRWGEPRKFDFEPKPHWEIGEELGILDFEAAARVTGSRFTFYKGLGARLE 173

Query: 277 QTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           + LI++M     +   Y E+  P ++ +     +G    +  + F V   D        +
Sbjct: 174 RALINFMLDLHIEKHGYTEVFPPFMVHRRSMFGTGQLPKFEEDAFKVYGTD--------Y 225

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDA 391
            L P        ++   +    +LP+    + + +R E   +     GL+R   F + + 
Sbjct: 226 FLIPTAEVPVTNMYRDTIIDGDKLPIYHCAYSACFRQEAGSAGRDTRGLIRQHQFNKVEL 285

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALW 441
             F   ++ + E  K+      + +  G    +V + T              +W
Sbjct: 286 VKFTEPDKSYEELEKMTRDAEEVLQALGLPYRVVVICTGDLGFTASKKYDIEVW 339


>gi|225552345|ref|ZP_03773285.1| alanyl-tRNA synthetase [Borrelia sp. SV1]
 gi|225371343|gb|EEH00773.1| alanyl-tRNA synthetase [Borrelia sp. SV1]
          Length = 594

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 54/130 (41%), Gaps = 10/130 (7%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           H+  H++ +A+Q +  +     G  I  +   +DF   +  + DE+ ++E+ +   I   
Sbjct: 456 HTATHLLHKALQLVLGDHVRQKGSNITAERLRFDFVHSEKMTDDEIKKVEEIVNLQIKNS 515

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTG 192
               K  +   +ARE         K          + V++Y    +  ++C GPHV +T 
Sbjct: 516 LSVKKIIMELSEAREKGAMALFGEKY--------DDLVSVYEIDGFSLEVCGGPHVENTN 567

Query: 193 QVKKFFKLMK 202
           ++  F    +
Sbjct: 568 ELGTFKIQKE 577


>gi|224534087|ref|ZP_03674670.1| alanyl-tRNA synthetase [Borrelia burgdorferi CA-11.2a]
 gi|224512786|gb|EEF83154.1| alanyl-tRNA synthetase [Borrelia burgdorferi CA-11.2a]
          Length = 594

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 54/130 (41%), Gaps = 10/130 (7%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           H+  H++ +A+Q +  +     G  I  +   +DF   +  + DE+ ++E+ +   I   
Sbjct: 456 HTATHLLHKALQLVLGDHVRQKGSNITAERLRFDFVHSEKMTDDEIKKVEEIVNLQIKNS 515

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTG 192
               K  +   +ARE         K          + V++Y    +  ++C GPHV +T 
Sbjct: 516 LSVKKIIMKLSEAREKGAMALFGEKY--------DDLVSVYEIDGFSLEVCGGPHVENTN 567

Query: 193 QVKKFFKLMK 202
           ++  F    +
Sbjct: 568 ELGTFKIQKE 577


>gi|197284595|ref|YP_002150467.1| seryl-tRNA synthetase [Proteus mirabilis HI4320]
 gi|227356777|ref|ZP_03841162.1| seryl-tRNA synthetase [Proteus mirabilis ATCC 29906]
 gi|238693172|sp|B4EV93|SYS_PROMH RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|194682082|emb|CAR41638.1| seryl-tRNA synthetase [Proteus mirabilis HI4320]
 gi|227163067|gb|EEI48002.1| seryl-tRNA synthetase [Proteus mirabilis ATCC 29906]
          Length = 429

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 65/188 (34%), Gaps = 11/188 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + +  +M     +   Y+E+  P +++      +G    +  ++F  K  ++    
Sbjct: 170 ARLHRAIAQFMLNLHTEQHGYQEMYVPYLVNHATLYGTGQLPKFSGDLFHTKPLEEES-- 227

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
              +AL P        +    +    ELP+R+      +R+E         GL+R+  F 
Sbjct: 228 ESQYALIPTAEVPVTNMVRDVILEEDELPLRMTAHTPCFRSEAGSYGRDTRGLIRMHQFD 287

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E+  +   ++      + +        V L T              +W  
Sbjct: 288 KVELVQIVHPEKSMDALEELTGHAEKVLQLLNLPYRKVVLCTGDMGFGARKTYDLEVWVP 347

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 348 AQNTYREI 355


>gi|167765169|ref|ZP_02437282.1| hypothetical protein BACSTE_03555 [Bacteroides stercoris ATCC
           43183]
 gi|167696797|gb|EDS13376.1| hypothetical protein BACSTE_03555 [Bacteroides stercoris ATCC
           43183]
          Length = 424

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 69/198 (34%), Gaps = 16/198 (8%)

Query: 245 DHRKLAREMDLFHIA----EDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQV 299
            H +LA++ DL          G+G   +  KG ++ + LI++ +    K  Y EI  P V
Sbjct: 143 PHWELAKKYDLIDFDLGVKITGAGFPVYKGKGAQLQRALINFFLDEARKSGYTEIMPPTV 202

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           ++            Y       K       ++    L P        ++   +   ++LP
Sbjct: 203 VNA--------ASGYGTGQLPDKEGQMYHCEVDDLYLIPTAEVPVTNIYRDVILDEKQLP 254

Query: 360 VRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ++   +   +R E       + GL R+  F++ +       E       ++ + +  + +
Sbjct: 255 IKNCAYTQCFRREAGSYGKDVRGLNRLHEFSKVELVRIDKPEHSKESHQEMLDHVEGLLQ 314

Query: 417 DFGFEKIMVKLSTRPEKR 434
                  +++L       
Sbjct: 315 KLELPYRILRLCGGDMSF 332


>gi|325280514|ref|YP_004253056.1| Histidyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712]
 gi|324312323|gb|ADY32876.1| Histidyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712]
          Length = 454

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 14/94 (14%), Positives = 35/94 (37%)

Query: 550 LSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIIC 609
           ++  Q +          Y   +   L+   ++ E       +  ++     K+IP + + 
Sbjct: 361 MTTTQILFVNFGKQEERYCLPLLKQLREAGINAEIYPEAAKMKKQMTYADKKEIPFVALI 420

Query: 610 GDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           G+ E  E  I ++   S     V++ + +  L +
Sbjct: 421 GENEMQEGIISLKNMLSGEQHNVTMEELVERLKR 454


>gi|326387205|ref|ZP_08208815.1| alanyl-tRNA synthetase [Novosphingobium nitrogenifigens DSM 19370]
 gi|326208386|gb|EGD59193.1| alanyl-tRNA synthetase [Novosphingobium nitrogenifigens DSM 19370]
          Length = 880

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 35/169 (20%), Positives = 70/169 (41%), Gaps = 15/169 (8%)

Query: 45  GKVCDLSDPVREGSIEI-------ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIG 97
           GK+      V  G+I +       I      +L    HS  H++ +A+++   +  +  G
Sbjct: 528 GKLHAHQGTVETGTIRVGDLVRLAIDTARRDALRA-NHSATHLLHQALRNRLGQHVMQKG 586

Query: 98  P-IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE--LFESKK 154
             +  +   +DF +    S++++A IE ++   I  +SP + + ++ + A E        
Sbjct: 587 SLVAGERLRFDFSQPTALSAEDIAVIEAEVNAQIRGNSPVVTRLMTPDDAIEAGAMALFG 646

Query: 155 EAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKV 203
           E Y  E+        +   Y      +LC G HVR+ G +  F  + + 
Sbjct: 647 EKYGDEVRVLSMGGSSDATY----SVELCGGTHVRALGDIGVFRIVSES 691


>gi|319935502|ref|ZP_08009937.1| alanyl-tRNA synthetase [Coprobacillus sp. 29_1]
 gi|319809533|gb|EFW05950.1| alanyl-tRNA synthetase [Coprobacillus sp. 29_1]
          Length = 869

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 67/153 (43%), Gaps = 16/153 (10%)

Query: 53  PVREGSI----EII--TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFY 105
            ++ GS+    E+I       R+L    H+  H++ +A++++  E     G  ++ +   
Sbjct: 533 KIKNGSVKVGDELILKVDAHKRALIQNNHTATHLLQKALKTVLGEHVSQSGSYVDAERLR 592

Query: 106 YDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESI 165
           +DF   Q  + +E+ ++E ++ E I        +++S ++A               L   
Sbjct: 593 FDFTHPQKMTDEEIRKVEDQVNEQIFNGLNVQIEFMSKDEA--------MHSGAMALFDE 644

Query: 166 PAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
              + V +   G++  +LC G HV ++ Q+  F
Sbjct: 645 KYGDQVRVVSVGDYSKELCGGCHVSNSAQIALF 677


>gi|307705779|ref|ZP_07642624.1| histidyl-tRNA synthetase [Streptococcus mitis SK597]
 gi|307620697|gb|EFN99788.1| histidyl-tRNA synthetase [Streptococcus mitis SK597]
          Length = 426

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 59/404 (14%), Positives = 126/404 (31%), Gaps = 56/404 (13%)

Query: 276 FQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           +Q +  + R   K  +Y E+ TP       ++          ++   +  D   K  R  
Sbjct: 20  WQYVEGFAREIFKRYNYAEVRTPIF---EHYEVISRSVGDTTDIVTKEMYDFYDKGDRHI 76

Query: 335 ALKPMNCPGHVAVFNHGLKS-----YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
            L+P    G   V    +++       + P +    G ++R E   +     R+R F Q 
Sbjct: 77  TLRP---EGTAPVVRSYVENKLFAPEVQKPSKFYYMGPMFRYERPQA----GRLRQFHQI 129

Query: 390 DAHVFCTKEQM-FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWD------ 442
               F +       E + +    +      G +  +  L     +     AL D      
Sbjct: 130 GVECFGSSNPATDVETIAMAAHFLKEIGIQGVKLHLNTLGNPESRAAYRQALIDYLTPLK 189

Query: 443 -----DAENIMKG----VLDTIKNSSQDR-------INTGVLLGEGAFYGPK-------F 479
                D++  ++     VLD+ +   +         ++      +  F   +        
Sbjct: 190 ETLSKDSQRRLEENPLRVLDSKEKEDKVAVENAPSILDFLDEESQAHFDAVRQMLENLGV 249

Query: 480 EYILKDAI--GRDWQCGTIQVDFNLPSRFNAFYVN---SHSEKCHPVMIHRAVFG---SI 531
           +YI+   +  G D+   TI          +              +      A FG    +
Sbjct: 250 DYIIDTNMVRGLDYYNHTIFEFITEIEGNDLTVCAGGRYDGLVAYFGGPETAGFGFGLGV 309

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           ER + ++    +G      + +   +  +   A   A E+   L+      E D+ N  +
Sbjct: 310 ERLLLVL--EKQGVALPIENALDVYIAVLGEGANVKALELVQALRQQGFKAERDYLNRKL 367

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
             + +   +     +I  G+ E     + ++   +    +VSL 
Sbjct: 368 KAQFKSADVFAAKTLITLGESEVESGQVTVKNNQTREEVQVSLE 411


>gi|124485533|ref|YP_001030149.1| seryl-tRNA synthetase [Methanocorpusculum labreanum Z]
 gi|166222742|sp|A2SRC6|SYS_METLZ RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|124363074|gb|ABN06882.1| seryl-tRNA synthetase [Methanocorpusculum labreanum Z]
          Length = 425

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 70/189 (37%), Gaps = 16/189 (8%)

Query: 242 EKRDHRKLAREMDL--FHIAEDGSGVIFWHRKG--WKIFQTLISY-MRRKIKDDYEEINT 296
           E ++H +LA       F  A   SG  F+  KG    +   L  + +   I   Y  I  
Sbjct: 138 ELKNHGELAAANGWADFERATKTSGAGFYFLKGNLALLDMALQRFALDTIIAKGYTPIIP 197

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P ++++  +++      +   M+ ++  D          L         A++   +   +
Sbjct: 198 PYMMNRKSYEEVTDLGDFEKVMYKIEDDDA--------YLIATAEHPMAAMYQDEIFEEK 249

Query: 357 ELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           +LP+++      +R E         GL RV  FT+ +  ++C  E+ +    ++      
Sbjct: 250 DLPLKMVGISPCFRREIGAHGLDSRGLFRVHQFTKIEQFIYCMPEKSWEMHEELLANAEE 309

Query: 414 IYKDFGFEK 422
           I+   G   
Sbjct: 310 IFTKLGLPY 318


>gi|32130134|sp|Q92IK8|SYH_RICCN RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
          Length = 414

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 71/426 (16%), Positives = 148/426 (34%), Gaps = 77/426 (18%)

Query: 269 HRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
               +K+   +I+  R   +   Y++++TP V    ++ +S       +++ + +     
Sbjct: 15  LPDDYKVHDYIINKARDVGVLYGYKQMSTPIVEYTKVFNRS---MGESSDVISKEIYSFL 71

Query: 328 IKDLRTFALKP--MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRG 385
            K     AL+P    C     + N   +   +LP++    G V+R +   +     R R 
Sbjct: 72  DKSNDFVALRPEFTACIIRSLISN---RLQHKLPLKFFSTGPVFRYDRPQA----GRQRQ 124

Query: 386 FTQDD-AHVFCTKEQMFNECLKIHNLIISIYKD----------FGFEKIMVKLSTRPEKR 434
           F Q +  ++         + LK+   I+   +            G  +       +  + 
Sbjct: 125 FHQLNYEYIGAKGAITDADTLKLAVDILKALEIEQDTTLELNSLGCNESRSVYQQKLVEY 184

Query: 435 VGS--DALWDDAENIMKG----VLDTIKNSSQD-----RINTGVLLGEGAFY-------- 475
           +    D L ++++  +      +LD+   + Q       + +     E   Y        
Sbjct: 185 LNDFKDQLSEESKIRLSKNPMRILDSKSETDQKIIANAPVLSEYYTDESKEYFEELIQYL 244

Query: 476 ---GPKFEYILKDAIGRDWQCGTI----------QVDFNLPSRFNAFYVNSHSEKCHPVM 522
              G K+    +   G D+ C T           Q       R++       +    P +
Sbjct: 245 DILGVKYSINPRLVRGLDYYCHTAFEFTTKKLGSQSTILAGGRYDGLAKIMGNNDDVPAI 304

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSI 582
                   IER I +M E     +          V  I  + + YA EI + L++ +++I
Sbjct: 305 ---GFAAGIER-IALMREYNISEVKP------VFVLPIGKNNICYALEIVDKLRTENIAI 354

Query: 583 ETDFRNETINYKIREHSIKKI-----PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
                 E++  KI +  +++I       II  GD+E +  ++ I+         V    A
Sbjct: 355 II----ESLG-KIAK-RMQRIFNENAQFIIFIGDEEQANNNLKIKDLKKAEEYIVDFAKA 408

Query: 638 IPILTK 643
           + +L K
Sbjct: 409 LELLKK 414


>gi|86130922|ref|ZP_01049521.1| Seryl-tRNA synthetase [Dokdonia donghaensis MED134]
 gi|85818333|gb|EAQ39493.1| Seryl-tRNA synthetase [Dokdonia donghaensis MED134]
          Length = 423

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 68/197 (34%), Gaps = 16/197 (8%)

Query: 240 ESEKRDHRKLAREMDLFHIA----EDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEI 294
                 H +LA++ D+          G+G   +  KG ++ + LI+Y + +     Y E 
Sbjct: 137 HDAALPHWELAKKYDIIDFELGTKITGAGFPVYKGKGARLQRALIAYFLDKNTAAGYTEY 196

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
             P ++++           +       K             L P        +F   L+S
Sbjct: 197 QVPHLVNE--------ASGFGTGQLPDKEGQMYHVTEDDLYLIPTAEVPVTNMFRGDLRS 248

Query: 355 YRELPVRLAEFGSVYRNEPSG---SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI 411
           + ELP+    +   +R E       + GL R+  F + +       +        + + +
Sbjct: 249 HSELPITCTGYTPCFRREAGSYGAHVRGLNRLHQFDKVEIVRIEHPDNSAAALDGMVDHV 308

Query: 412 ISIYKDFGFEKIMVKLS 428
            +I ++      +++L 
Sbjct: 309 KTILQELELPYRILRLC 325


>gi|254829737|ref|ZP_05234392.1| alanyl-tRNA synthetase [Listeria monocytogenes 10403S]
          Length = 879

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 60/143 (41%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFS 115
            ++++      R   +  H+  H++  A++    E     G ++  D   +DF      +
Sbjct: 548 DTVKLAVDRVKRRETIKNHTATHLLHRALKDTLGEHVNQAGSLVSPDRLRFDFSHFGQIT 607

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            +EL ++E+ + E I      + + +   +A+EL        K          + V + +
Sbjct: 608 EEELTKMEEIVNEKIWEQINVVIEEMPIAEAKELGAMALFGEKY--------GDIVRVVQ 659

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G++  +LC G HVR+T  +  F
Sbjct: 660 VGKYSIELCGGVHVRNTADIGLF 682


>gi|87199300|ref|YP_496557.1| alanyl-tRNA synthetase [Novosphingobium aromaticivorans DSM 12444]
 gi|123489936|sp|Q2G8V0|SYA_NOVAD RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|87134981|gb|ABD25723.1| alanyl-tRNA synthetase [Novosphingobium aromaticivorans DSM 12444]
          Length = 881

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 34/172 (19%), Positives = 68/172 (39%), Gaps = 21/172 (12%)

Query: 45  GKVCDLSDPVREGSIEI-----ITPEDPRSLAVI-RHSCAHIMAEAVQSIWPEVQVAIGP 98
           G++   +  V+ GS+++     +  +  R  A+   HS  H++  A++          G 
Sbjct: 529 GRLHAHNAKVQSGSVKVGDVVRLDIDVARRDAIRANHSATHLLHAALRHRLGAHVTQKGS 588

Query: 99  -IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE------LFE 151
            +  D   +DF      S++++A IE ++   I  +     + +S E A E        E
Sbjct: 589 LVAADRLRFDFSHPTALSAEDIAAIEAEVNAEIRANEVVTTRLMSPEDAIEAGAMALFGE 648

Query: 152 SKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKV 203
              +  +V  +  +  K            +LC G HVR+ G +  F  + + 
Sbjct: 649 KYGDEVRVLSMGRVADKHY--------SVELCGGTHVRALGDIGVFRIVSES 692


>gi|34580651|ref|ZP_00142131.1| histidyl-tRNA synthetase [Rickettsia sibirica 246]
 gi|28262036|gb|EAA25540.1| histidyl-tRNA synthetase [Rickettsia sibirica 246]
          Length = 404

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 71/426 (16%), Positives = 148/426 (34%), Gaps = 77/426 (18%)

Query: 269 HRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
               +K+   +I+  R   +   Y++++TP V    ++ +S       +++ + +     
Sbjct: 5   LPDDYKVHDYIINKARDVGVLYGYKQMSTPIVEYTKVFNRS---MGESSDVISKEIYSFL 61

Query: 328 IKDLRTFALKP--MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRG 385
            K     AL+P    C     + N   +   +LP++    G V+R +   +     R R 
Sbjct: 62  DKSNDFVALRPEFTACIIRSLISN---RLQHKLPLKFFSTGPVFRYDRPQA----GRQRQ 114

Query: 386 FTQDD-AHVFCTKEQMFNECLKIHNLIISIYKD----------FGFEKIMVKLSTRPEKR 434
           F Q +  ++         + LK+   I+   +            G  +       +  + 
Sbjct: 115 FHQLNYEYIGAKGAITDADTLKLAVDILKALEIEQDTTLELNSLGCNESRSVYQQKLVEY 174

Query: 435 VGS--DALWDDAENIMKG----VLDTIKNSSQD-----RINTGVLLGEGAFY-------- 475
           +    D L ++++  +      +LD+   + Q       + +     E   Y        
Sbjct: 175 LNDFKDQLSEESKIRLSKNPMRILDSKSETDQKIIANAPVLSEYYTDESKEYFEELIQYL 234

Query: 476 ---GPKFEYILKDAIGRDWQCGTI----------QVDFNLPSRFNAFYVNSHSEKCHPVM 522
              G K+    +   G D+ C T           Q       R++       +    P +
Sbjct: 235 DILGVKYSINPRLVRGLDYYCHTAFEFTTKKLGSQSTILAGGRYDGLAKIMGNNDDVPAI 294

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSI 582
                   IER I +M E     +          V  I  + + YA EI + L++ +++I
Sbjct: 295 ---GFAAGIER-IALMREYNISEVKP------VFVLPIGKNNICYALEIVDKLRTENIAI 344

Query: 583 ETDFRNETINYKIREHSIKKI-----PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
                 E++  KI +  +++I       II  GD+E +  ++ I+         V    A
Sbjct: 345 II----ESLG-KIAK-RMQRIFNENAQFIIFIGDEEQANNNLKIKDLKKAEEYIVDFAKA 398

Query: 638 IPILTK 643
           + +L K
Sbjct: 399 LELLKK 404


>gi|212697522|ref|ZP_03305650.1| hypothetical protein ANHYDRO_02095 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212675521|gb|EEB35128.1| hypothetical protein ANHYDRO_02095 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 432

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 14/81 (17%), Positives = 30/81 (37%)

Query: 556 IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEAS 615
           ++  +      YA +I N LK+    ++    +     KI       +  +II G +E  
Sbjct: 347 LIIPMDEKLNFYAIDIGNDLKNKGYKVDIYLEDGKFKKKINYADKIGVKKVIIIGQEEYE 406

Query: 616 ERSIGIRRFGSTTTQKVSLLD 636
            + + ++         V + D
Sbjct: 407 NKMVSVKNMEDGNQVSVKIED 427


>gi|149025695|gb|EDL81938.1| seryl-aminoacyl-tRNA synthetase 1, isoform CRA_a [Rattus
           norvegicus]
          Length = 536

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 30/165 (18%), Positives = 58/165 (35%), Gaps = 11/165 (6%)

Query: 271 KGWKIF--QTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
           KG  +F  Q LI Y +R      Y  I TP  + + + Q+      +   ++ V      
Sbjct: 197 KGVLVFLEQALIQYALRTLGSRGYTPIYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGSE 256

Query: 328 IKDLRTFALKP---MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLM 381
             D  ++  K     +     A+         +LP++ A F + +R E         G+ 
Sbjct: 257 KSDDSSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGFSTCFRQEVGSHGRDTRGIF 316

Query: 382 RVRGFTQDDAHVFCTKEQ--MFNECLKIHNLIISIYKDFGFEKIM 424
           RV  F + +  V+ +      +    ++       Y+  G    +
Sbjct: 317 RVHQFEKIEQFVYSSPHDNKSWEMFDEMITTAEEFYQSLGIPYHI 361


>gi|114558191|ref|XP_001148496.1| PREDICTED: seryl-tRNA synthetase isoform 5 [Pan troglodytes]
          Length = 459

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 57/165 (34%), Gaps = 11/165 (6%)

Query: 271 KGWKIF--QTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
           KG  +F  Q LI Y +R      Y  I TP  + + + Q+      +   ++ V      
Sbjct: 197 KGVLVFLEQALIQYALRTLGSRGYIPIYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGSE 256

Query: 328 IKDLRTFALKP---MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLM 381
             D  ++  K     +     A+         +LP++ A   + +R E         G+ 
Sbjct: 257 KSDDNSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGRDTRGIF 316

Query: 382 RVRGFTQDDAHVFCTKEQ--MFNECLKIHNLIISIYKDFGFEKIM 424
           RV  F + +  V+ +      +    ++       Y+  G    +
Sbjct: 317 RVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHI 361


>gi|332828951|gb|EGK01634.1| seryl-tRNA synthetase [Dysgonomonas gadei ATCC BAA-286]
          Length = 423

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 69/198 (34%), Gaps = 16/198 (8%)

Query: 245 DHRKLAREMDLFHIA----EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQV 299
            H  LA++ DL          G+G   +  KG ++ + LI+Y   K ++  Y E+  P V
Sbjct: 142 PHWDLAKKYDLIDFELGVKISGAGFPVYKGKGARLQRALINYFLDKAREAGYLEVQPPYV 201

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           ++            Y       K        +    L P        ++   +   ++ P
Sbjct: 202 VNA--------ASGYGTGQLPDKEGQMYHATVDDLYLIPTAEVPVTNIYRDVILEEKDFP 253

Query: 360 VRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           V    + + +R E       + GL R+  F + +       E  +    ++   + S+ +
Sbjct: 254 VMNTAYSACFRREAGSYGKDVRGLNRLHQFDKVEIVRIDKPEHSYQSLKEMVAHVQSLVE 313

Query: 417 DFGFEKIMVKLSTRPEKR 434
           + G    +++L       
Sbjct: 314 ELGLPWRILRLCGGDMSF 331


>gi|282857769|ref|ZP_06266978.1| serine--tRNA ligase [Pyramidobacter piscolens W5455]
 gi|282584439|gb|EFB89798.1| serine--tRNA ligase [Pyramidobacter piscolens W5455]
          Length = 428

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 71/205 (34%), Gaps = 17/205 (8%)

Query: 256 FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDS 313
                  S    +   G ++ + +++YM      K  Y E N P +++      +G    
Sbjct: 153 RGPRMAQSRFTVFKGLGARLERAIMNYMLDMHTQKHGYTEFNVPVMVNSESMLGTGQLPK 212

Query: 314 YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP 373
           +  +++ V        +     + P        + N  + S  ELP     +   +R E 
Sbjct: 213 FAEDLYKV--------EKDDLWMIPTAEVPLTNMHNGEMLSESELPKYYTAYTPCFRRES 264

Query: 374 ---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR 430
                 + G+MR+  F + +    CT E  ++E  K+      + +  G    ++ L T 
Sbjct: 265 GSYGRDVRGIMRLHQFDKVEMVKICTPESSWDELEKLTGNAEEVLQGLGLPYRVIVLCTG 324

Query: 431 PEKR----VGSDALWDDAENIMKGV 451
                        +W  ++N  + +
Sbjct: 325 DMGFGSAKTYDVEVWLPSQNCYREI 349


>gi|257454217|ref|ZP_05619487.1| seryl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
 gi|257448390|gb|EEV23363.1| seryl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
          Length = 421

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 39/244 (15%), Positives = 83/244 (34%), Gaps = 21/244 (8%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDL--FHIAEDGSGVIFWHRKG--WKIF 276
           G   N   E+ ++    +   E +DH  L   + L  F +A   +G  F   KG   K+ 
Sbjct: 114 GKDENDNVEMRRWGEPRQFDFEVKDHSDLGENLGLLDFEMAAKLTGSRFSVLKGQLAKLN 173

Query: 277 QTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           + LI++M     D   Y E+  P +++      +G    +  ++F +       +  + +
Sbjct: 174 RALIAFMLTTHTDKYGYTEMYVPYMVNADSLLGTGQLPKFEEDLFKL-------RGEKEY 226

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDA 391
            L P +           +     LP+++      +R+E   +     GL+R   F + + 
Sbjct: 227 YLIPTSEVPLTNSVRDKILDPEALPIKVTAHTPCFRSEAGSAGRDTRGLIRQHQFEKVEM 286

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENI 447
                 E        +      I +  G    ++ L                +W  ++  
Sbjct: 287 VQIVHPETSMQALEDMTGQAEYILQQLGLPYRVIVLCGGDMGFSAVKTYDIEVWLPSQTT 346

Query: 448 MKGV 451
            + +
Sbjct: 347 YREI 350


>gi|297582352|ref|YP_003698132.1| seryl-tRNA synthetase [Bacillus selenitireducens MLS10]
 gi|297140809|gb|ADH97566.1| seryl-tRNA synthetase [Bacillus selenitireducens MLS10]
          Length = 424

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 38/244 (15%), Positives = 83/244 (34%), Gaps = 22/244 (9%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIF 276
           G      +E+  +        E + H  LA   D+          GS    +   G ++ 
Sbjct: 115 GLDETENEEIRTWGERPAFDFEGKAHWDLAVTHDIVDFERASKITGSRFAIYKGAGARLE 174

Query: 277 QTLISYMRR--KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           + L+++M    + K  Y E+  P ++++     +G    +  + F ++           +
Sbjct: 175 RALMNFMMDFHEDKHGYTEVLPPYMVNRDSMTGTGQLPKFEEDAFQIR--------EEDY 226

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDA 391
            L P        +    + +  ELP+  + F + +R+E   +     GL+R   F + + 
Sbjct: 227 FLIPTAEVPVTNMHRDEILTADELPIAYSAFSACFRSEAGSAGRDTRGLIRQHQFNKVEL 286

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENI 447
             F   E  + E  K+      I +       ++ + T              +W  +   
Sbjct: 287 VRFVKPEDSYAELEKLTGHAEKILQQLNLPYRVLNMCTGDLGFTAAKKYDIEVWLPSYGE 346

Query: 448 MKGV 451
            K +
Sbjct: 347 YKEI 350


>gi|195953907|ref|YP_002122197.1| alanyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
 gi|195933519|gb|ACG58219.1| alanyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
          Length = 856

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 31/154 (20%), Positives = 67/154 (43%), Gaps = 11/154 (7%)

Query: 54  VREGSIEIITPEDPRSLAVIRH-SCAHIMAEAVQSIWPEVQVAIGPIIEDGF-YYDFDKE 111
           +R G+  +   +  R   + RH +  H++  A+++++ E     G  + D F  +DF   
Sbjct: 530 LRVGTDVLAKIDKERREDIKRHHTSTHLLHAALRNMFGESVRQAGSYVGDEFLRFDFTFY 589

Query: 112 QPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENV 171
           +    +EL  +E  + E I ++     + L +++A +         K          + V
Sbjct: 590 RSLKPEELEALEAMINEEIMKNEEIFVKELPYQEAIKTGAIAIFEEKY--------GDVV 641

Query: 172 TLYRQGEW-FDLCRGPHVRSTGQVKKFFKLMKVA 204
            +   G++  +LC G HV+ TG +  F  + + +
Sbjct: 642 RVISAGDFSKELCGGTHVKRTGDIGYFKLISESS 675


>gi|153802126|ref|ZP_01956712.1| seryl-tRNA synthetase [Vibrio cholerae MZO-3]
 gi|124122319|gb|EAY41062.1| seryl-tRNA synthetase [Vibrio cholerae MZO-3]
          Length = 435

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 26/190 (13%), Positives = 61/190 (32%), Gaps = 11/190 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + +  +M     D   Y E+  P +++      +G    +  ++F  +   +   D
Sbjct: 172 ARLHRAIAQFMLDLHTDQHGYTELYVPYLVNAETLFGTGQLPKFGQDLFHTEPLTEKASD 231

Query: 331 L--RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRG 385
              R  +L P        +    +    ELP+++      +R+E         GL+R+  
Sbjct: 232 EEPRRLSLIPTAEVPVTNLVRDTILDETELPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQ 291

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALW 441
           F + +       E       ++      + +        V L T              +W
Sbjct: 292 FDKVELVQITRPEDSMAALEELTGHAEKVLQLLELPYRKVILCTGDMGFGSCKTYDLEVW 351

Query: 442 DDAENIMKGV 451
             A+   + +
Sbjct: 352 VPAQKTYREI 361


>gi|325524775|gb|EGD02749.1| histidyl-tRNA synthetase [Burkholderia sp. TJI49]
          Length = 446

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 62/405 (15%), Positives = 124/405 (30%), Gaps = 73/405 (18%)

Query: 289 DDYEEINTPQVLDQHLWQ--QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA 346
             Y+ I TP V    L+        D     M++   A +         ++P N    V 
Sbjct: 42  YGYQNIRTPIVEHTQLFTRGIGEVTDIVEKEMYSFTDALN----GENLTMRPEN-TAAVV 96

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD--DAHVFCTKEQMFNEC 404
                     + P RL   G ++R+E         R R F Q   +A  F   +      
Sbjct: 97  RAAIEHNMLYDGPKRLWYIGPMFRHERPQR----GRYRQFHQVGVEALGFAGPDADA--- 149

Query: 405 LKIHNLIISIYKDFG--------------FEKIMVKLSTRPEKRVGSDALWDDAENIM-- 448
            +I  +   ++ D G               E+   ++          D L +DA+  +  
Sbjct: 150 -EIIMMCQRLWDDLGLTGIKLEINSLGLAEERAAHRVELIKYLEQFVDVLDEDAKRRLYT 208

Query: 449 ---------KGVLDTIKNSSQDRINTGVLLGEGAFYGP-------KFEYILKDAIGRDWQ 492
                       L  I  ++   I+         F G           + +   + R   
Sbjct: 209 NPLRVLDTKNPALQEIAQNAPKLIDFLGDESRAHFEGLQRLLLANNIPFKINPRLVRGLD 268

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIH-------RAVFGS-IERFIGIMIENFKG 544
              + V   +  +  A    +   +  P++            +   IER + ++ E    
Sbjct: 269 YYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQLGGKPTAACGWAMGIERILELLKEED-- 326

Query: 545 NLPLWLSPIQ----AIVTTITSSAVEYAQEIANLLKSHHLSI----ETDFRNETINYKIR 596
                L+P Q      V     +A E A   A  L+   L +      D    +   +++
Sbjct: 327 -----LAPEQEGVDVYVVHQGEAAREQAFIAAERLRDTGLDVIFHCSADGGPASFKSQMK 381

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRR-FGSTTTQKVSLLDAIPI 640
                     +I G++E +  ++G++   G+    + ++   +P+
Sbjct: 382 RADASGAAFAVIFGEEEVANGTVGVKALRGAGEEGEKNVQQTVPV 426


>gi|120435468|ref|YP_861154.1| histidyl-tRNA synthetase [Gramella forsetii KT0803]
 gi|166980048|sp|A0M0E2|SYH_GRAFK RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|117577618|emb|CAL66087.1| histidyl-tRNA synthetase [Gramella forsetii KT0803]
          Length = 456

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 41/338 (12%), Positives = 102/338 (30%), Gaps = 66/338 (19%)

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           E P +  +   V+R +         R R F Q DA V  +      + ++   L  +++ 
Sbjct: 119 EFPFKRYQIQPVWRADRPQK----GRFREFFQCDADVVGS--NSLWQEVEFVQLYDAVFN 172

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENI-MKGVLDTIKNSSQDRINTGVLLGEGA-- 473
             G E + +K++ R      ++ + +  + I     LD +    ++ +   +     +  
Sbjct: 173 KLGLEGVTIKINNRKVLSGFAEVIGEQDKLIDFTVALDKLDKIGEEGVKKEMREKGISEE 232

Query: 474 -------------FYGPKFEYILKDAIGRD--------------------WQCGTIQVDF 500
                         +  K E +     G +                         + +D 
Sbjct: 233 ALNKIQPIFNLNGNFAEKIEGLKTILEGSETGQKGIEELQFIQNAIEEMPLSVAKLDLDV 292

Query: 501 NLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF-----------------------IGI 537
            L    N +Y  +  E   P  +     G   R+                       I +
Sbjct: 293 TLARGLN-YYTGAIFEVAAPENVKMGSIGGGGRYDDLTGIFGLKDMSGIGISFGLDRIYL 351

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           ++E             + +          YA +    L+  ++  E    +  +  +++ 
Sbjct: 352 VLEELGLFPATVTENTKVLFINFGEKEALYAMKAVKRLREENIIAELYPDSAKMGKQMKY 411

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
              + IP +++ G++E +++   ++   S     +   
Sbjct: 412 ADKRSIPYVVLAGEEEINDKKFTLKHMKSGEQSNLDFN 449


>gi|30022464|ref|NP_834095.1| alanyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|206969900|ref|ZP_03230854.1| alanyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|229081653|ref|ZP_04214148.1| Alanyl-tRNA synthetase [Bacillus cereus Rock4-2]
 gi|229111861|ref|ZP_04241407.1| Alanyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|229129669|ref|ZP_04258637.1| Alanyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|229180664|ref|ZP_04308004.1| Alanyl-tRNA synthetase [Bacillus cereus 172560W]
 gi|296504879|ref|YP_003666579.1| alanyl-tRNA synthetase [Bacillus thuringiensis BMB171]
 gi|33301672|sp|Q817Z0|SYA_BACCR RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|29898022|gb|AAP11296.1| Alanyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|206735588|gb|EDZ52756.1| alanyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|228602809|gb|EEK60290.1| Alanyl-tRNA synthetase [Bacillus cereus 172560W]
 gi|228653786|gb|EEL09656.1| Alanyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|228671617|gb|EEL26915.1| Alanyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|228701657|gb|EEL54148.1| Alanyl-tRNA synthetase [Bacillus cereus Rock4-2]
 gi|296325931|gb|ADH08859.1| alanyl-tRNA synthetase [Bacillus thuringiensis BMB171]
          Length = 880

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 66/161 (40%), Gaps = 15/161 (9%)

Query: 44  NGK-----VCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP 98
           NG+     V +     ++ +++ I     RS  V  H+  H++ +A++ +        G 
Sbjct: 531 NGQNLHKVVVEEGTLTKDAAVKAIIDTKNRSSVVKNHTATHLLHQALKDVLGTHVNQAGS 590

Query: 99  -IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAY 157
            +  +   +DF       +DEL +IE+ + E I           + E+A+E+        
Sbjct: 591 LVTSERLRFDFSHFGQVQADELEKIERMVNEKIWESIDVEISQKAIEEAKEMGAMALFGE 650

Query: 158 KVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
           K          + V + + G++  +LC G HV +T  +  F
Sbjct: 651 KY--------GDVVRVVQVGDYSLELCGGCHVDNTASIGIF 683


>gi|332184963|ref|ZP_08386712.1| seryl-tRNA synthetase [Sphingomonas sp. S17]
 gi|332014687|gb|EGI56743.1| seryl-tRNA synthetase [Sphingomonas sp. S17]
          Length = 425

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 36/222 (16%), Positives = 75/222 (33%), Gaps = 21/222 (9%)

Query: 242 EKRDHRKLAREMDL-FHIAEDGSGVIFWHRKGW--KIFQTLISYMRRKIKD--DYEEINT 296
           E R+H  +A  + + F      SG  F   +G   ++ + L  +M  ++ +   +E +  
Sbjct: 137 EAREHDVIAPALGMDFDTGVALSGARFTLLRGAMARLSRALGQFMLDRMTEQHGFELVQP 196

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P ++       +G    +  ++F          D R     P        +    + S +
Sbjct: 197 PLLVRDEAAFGTGQLPKFAEDLFRTT-------DGRWLI--PTAEVSLTNIVREAILSEQ 247

Query: 357 ELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           ELP+R       +R+E   +     GL+R   F + +     T EQ   E  ++      
Sbjct: 248 ELPLRFTALTPCFRSEAGAAGRDTRGLIRQHQFDKVEMVSITTPEQSDAEHERMTAAAEG 307

Query: 414 IYKDFGFEKIMV----KLSTRPEKRVGSDALWDDAENIMKGV 451
           + +  G     +            R     +W   +   + +
Sbjct: 308 VLEALGLPYRRMLLCTGDMGFSAARTFDLEVWLPGQARYREI 349


>gi|260773037|ref|ZP_05881953.1| seryl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
 gi|260612176|gb|EEX37379.1| seryl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
          Length = 435

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 27/190 (14%), Positives = 63/190 (33%), Gaps = 11/190 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + +  +M     +   Y E+  P +++Q     +G    +  ++F  +   +   D
Sbjct: 172 ARLHRAIAQFMLDLHTEQHGYTELYVPYLVNQETLFGTGQLPKFGKDLFHTEPLTEKASD 231

Query: 331 L--RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRG 385
              R F+L P        +    +    ELP+++      +R+E         GL+R+  
Sbjct: 232 EDPRRFSLIPTAEVPVTNLVRDVILDEAELPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQ 291

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALW 441
           F + +       E       ++      + +        V L T              +W
Sbjct: 292 FDKVELVQITKPEDSMAALEELTAHAEKVLQLLNLPYRKVVLCTGDMGFGACKTYDLEVW 351

Query: 442 DDAENIMKGV 451
             A+   + +
Sbjct: 352 VPAQKTYREI 361


>gi|125624984|ref|YP_001033467.1| histidyl-tRNA synthetase [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|166228557|sp|A2RN96|SYH_LACLM RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|124493792|emb|CAL98784.1| HisS protein [Lactococcus lactis subsp. cremoris MG1363]
 gi|300071783|gb|ADJ61183.1| histidyl-tRNA synthetase [Lactococcus lactis subsp. cremoris
           NZ9000]
          Length = 430

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 63/422 (14%), Positives = 124/422 (29%), Gaps = 57/422 (13%)

Query: 269 HRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
                  +Q +    R    D +++EI TP       ++         +++   +  D  
Sbjct: 13  LPAETAKWQYIEEIARGVFNDYNFKEIRTPMF---ESYELFSRATGETSDIVTKEMYDFE 69

Query: 328 IKDLRTFALKP--MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRG 385
            K  R  AL+P          + N         PV+L     ++R E   S     R+R 
Sbjct: 70  DKGGRHIALRPEGTASAVRAYIENKLYAPEVVKPVKLWYDAPMFRYERPQS----GRLRQ 125

Query: 386 FTQD------------DAHVFCTKEQMFNE---------------------CLKIHNLII 412
           F Q             D  +    + +F +                       +     +
Sbjct: 126 FHQFGVECLGLKNPAVDVEIIAMADTLFRQLGISGVKLSLNTLGDMESRKAYRQALIDYL 185

Query: 413 SIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV-LDTIKNSSQDRINTGVLLGE 471
           + +++   E    +L+  P + + S    D A        LD +  +S+        L E
Sbjct: 186 TPFENQLSEDSRRRLNENPLRVLDSKEAEDIAIVKNAPAILDYLNETSKAYFEEVKALLE 245

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN---SHSEKCHPVMIHRAVF 528
                   +  +    G D+   TI                         +        F
Sbjct: 246 ALNIEYTIDSNM--VRGLDYYNDTIFEFIVNFDGKELTVCGGGRYDGLVEYFDGPATPAF 303

Query: 529 G---SIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD 585
           G    IER + I  +     +P     +   +  +   A   A ++A  L+     +E D
Sbjct: 304 GFGLGIERLLMIAEKQEINFIPE--ETLDVYIAVMGEKANLEATKLAESLREQAFKVERD 361

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR---RFGSTTTQKVSLLDAIPILT 642
           F N  +  + +        +II  G+ E     I ++         T   ++ ++   + 
Sbjct: 362 FSNRKLGAQFKTAEKLGAELIITLGEDEVRTGQIKVKHNQTRKQVETTLQAVHESFAPIF 421

Query: 643 KE 644
           +E
Sbjct: 422 EE 423


>gi|89890029|ref|ZP_01201540.1| seryl-tRNA synthetase [Flavobacteria bacterium BBFL7]
 gi|89518302|gb|EAS20958.1| seryl-tRNA synthetase [Flavobacteria bacterium BBFL7]
          Length = 423

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 32/220 (14%), Positives = 78/220 (35%), Gaps = 20/220 (9%)

Query: 244 RDHRKLAREMDLFHIA----EDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQ 298
           + H +L ++ D+          G+G   + RKG ++ + LI+Y + +     YEE+  P 
Sbjct: 141 KPHWELVKDYDIIDFELGTKITGAGFPVYKRKGARLQRALINYFLDKNTAAGYEEMQVPH 200

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++++           +       K        +    L P        ++   L   ++L
Sbjct: 201 LVNE--------ASGFGTGQLPDKEGQMYHVGVDDLYLIPTAEVPITNLYRGDLLEAKDL 252

Query: 359 PVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           P+ +  +   +R E       + GL R+  F + +       +Q  +    +   + +I 
Sbjct: 253 PIAMTGYTPCFRREAGSYGSDVRGLNRLHQFDKVEILRIEHPDQSDSALDAMVVHVKNIL 312

Query: 416 KDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
           ++      +++L                ++  A++    V
Sbjct: 313 EELELPYRILRLCGGDLGFTSTLTYDFEIYSTAQDKWLEV 352


>gi|332665948|ref|YP_004448736.1| seryl-tRNA synthetase [Haliscomenobacter hydrossis DSM 1100]
 gi|332334762|gb|AEE51863.1| seryl-tRNA synthetase [Haliscomenobacter hydrossis DSM 1100]
          Length = 425

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 36/237 (15%), Positives = 81/237 (34%), Gaps = 20/237 (8%)

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFH----IAEDGSGVIFWHRKGWKIFQ 277
           G      +                H +LA +  +F     +   G+G   +  KG K+ +
Sbjct: 120 GITPEDNEIFRPGPEPELGESALPHWELAAKYKVFDLELGVKLTGAGFPVYRGKGAKLER 179

Query: 278 TLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFAL 336
            LI++ +       YEEI  P ++++   + +G      A M+ V   +          L
Sbjct: 180 ALINFFLDEASAAGYEEIIPPLMVNEDSARGTGQLPDKEAQMYHVTLDN--------LYL 231

Query: 337 KPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG---SLHGLMRVRGFTQDDAHV 393
            P        ++   +     LP+++  +   +R E       + GL RV  F + +   
Sbjct: 232 IPTAEVPVTNIYRDEILDAAALPIKMTAYTPCFRREAGSYGAHVRGLNRVHQFDKIEIVQ 291

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAEN 446
               ++ ++  +++   +  +    G    +++L                +W  A+ 
Sbjct: 292 IVHPDKSYDTLMEMLEHVAGLLNKLGLPFRILRLCGGDMGFTSALTFDFEVWSAAQK 348


>gi|290968328|ref|ZP_06559869.1| alanine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
 gi|290781603|gb|EFD94190.1| alanine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
          Length = 869

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 31/154 (20%), Positives = 69/154 (44%), Gaps = 11/154 (7%)

Query: 54  VREGSIEIITPEDPRSLAVIR-HSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKE 111
           +++G    +  +  R  A+ R H+  H++  A++ +        G  +  D   +DF   
Sbjct: 534 LKKGETVTVAVDTERHAALARNHTATHLLHTALRQVLGNHVNQAGSLVTPDHLRFDFTHF 593

Query: 112 QPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENV 171
            P ++ EL + E+ +   I +++P +   ++ E+A++   +     K          + V
Sbjct: 594 SPVTAAELREAEQLVNREILKNTPVMVTEMNREEAKQKGATALFGEKY--------GDVV 645

Query: 172 TLYRQGEW-FDLCRGPHVRSTGQVKKFFKLMKVA 204
            +   G++  +LC G HV+ST +V  F  + +  
Sbjct: 646 RVVSIGDFSCELCGGSHVKSTAEVGTFRIISESG 679


>gi|228923140|ref|ZP_04086431.1| Alanyl-tRNA synthetase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228836519|gb|EEM81869.1| Alanyl-tRNA synthetase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 880

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 66/161 (40%), Gaps = 15/161 (9%)

Query: 44  NGK-----VCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP 98
           NG+     V +     ++ +++ I     RS  V  H+  H++ +A++ +        G 
Sbjct: 531 NGQNLHKVVVEEGTLTKDAAVKAIIDTKNRSSVVKNHTATHLLHQALKDVLGTHVNQAGS 590

Query: 99  -IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAY 157
            +  +   +DF       +DEL +IE+ + E I           + E+A+E+        
Sbjct: 591 LVTSERLRFDFSHFGQVQADELEKIERMVNEKIWESIDVEISQKAIEEAKEMGAMALFGE 650

Query: 158 KVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
           K          + V + + G++  +LC G HV +T  +  F
Sbjct: 651 KY--------GDVVRVVQVGDYSLELCGGCHVDNTASIGIF 683


>gi|229146959|ref|ZP_04275323.1| Alanyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|228636558|gb|EEK93024.1| Alanyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
          Length = 880

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 66/161 (40%), Gaps = 15/161 (9%)

Query: 44  NGK-----VCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP 98
           NG+     V +     ++ +++ I     RS  V  H+  H++ +A++ +        G 
Sbjct: 531 NGQNLHKVVVEEGTLTKDAAVKAIIDTKNRSSVVKNHTATHLLHQALKDVLGTHVNQAGS 590

Query: 99  -IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAY 157
            +  +   +DF       +DEL +IE+ + E I           + E+A+E+        
Sbjct: 591 LVTSERLRFDFSHFGQVQADELEKIERMVNEKIWESIDVEISQKAIEEAKEMGAMALFGE 650

Query: 158 KVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
           K          + V + + G++  +LC G HV +T  +  F
Sbjct: 651 KY--------GDVVRVVQVGDYSLELCGGCHVDNTASIGIF 683


>gi|229192600|ref|ZP_04319561.1| Alanyl-tRNA synthetase [Bacillus cereus ATCC 10876]
 gi|228590907|gb|EEK48765.1| Alanyl-tRNA synthetase [Bacillus cereus ATCC 10876]
          Length = 880

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 66/161 (40%), Gaps = 15/161 (9%)

Query: 44  NGK-----VCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP 98
           NG+     V +     ++ +++ I     RS  V  H+  H++ +A++ +        G 
Sbjct: 531 NGQNLHKVVVEEGTLTKDAAVKAIIDTKNRSSVVKNHTATHLLHQALKDVLGTHVNQAGS 590

Query: 99  -IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAY 157
            +  +   +DF       +DEL +IE+ + E I           + E+A+E+        
Sbjct: 591 LVTSERLRFDFSHFGQVQADELEKIERMVNEKIWESIDVEISQKAIEEAKEMGAMALFGE 650

Query: 158 KVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
           K          + V + + G++  +LC G HV +T  +  F
Sbjct: 651 KY--------GDVVRVVQVGDYSLELCGGCHVDNTASIGIF 683


>gi|224532653|ref|ZP_03673274.1| alanine--tRNA ligase [Borrelia burgdorferi WI91-23]
 gi|224512433|gb|EEF82813.1| alanine--tRNA ligase [Borrelia burgdorferi WI91-23]
          Length = 594

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 54/130 (41%), Gaps = 10/130 (7%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           H+  H++ +A+Q +  +     G  I  +   +DF   +  + DE+ ++E+ +   I   
Sbjct: 456 HTATHLLHKALQLVLGDHVRQKGSNITAERLRFDFVHSEKMTDDEIKKVEEIVNLQIKNS 515

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTG 192
               K  +   +ARE         K          + V++Y    +  ++C GPHV +T 
Sbjct: 516 LFVKKIIMKLSEAREKGAMALFGEKY--------DDLVSVYEIDGFSLEVCGGPHVENTN 567

Query: 193 QVKKFFKLMK 202
           ++  F    +
Sbjct: 568 ELGTFKIQKE 577


>gi|218231748|ref|YP_002369198.1| alanyl-tRNA synthetase [Bacillus cereus B4264]
 gi|218159705|gb|ACK59697.1| alanine--tRNA ligase [Bacillus cereus B4264]
          Length = 880

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 66/161 (40%), Gaps = 15/161 (9%)

Query: 44  NGK-----VCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP 98
           NG+     V +     ++ +++ I     RS  V  H+  H++ +A++ +        G 
Sbjct: 531 NGQNLHKVVVEEGTLTKDAAVKAIIDTKNRSSVVKNHTATHLLHQALKDVLGTHVNQAGS 590

Query: 99  -IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAY 157
            +  +   +DF       +DEL +IE+ + E I           + E+A+E+        
Sbjct: 591 LVTSERLRFDFSHFGQVQADELEKIERMVNEKIWESIDVEISQKAIEEAKEMGAMALFGE 650

Query: 158 KVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
           K          + V + + G++  +LC G HV +T  +  F
Sbjct: 651 KY--------GDVVRVVQVGDYSLELCGGCHVDNTASIGIF 683


>gi|329889968|ref|ZP_08268311.1| seryl-tRNA synthetase [Brevundimonas diminuta ATCC 11568]
 gi|328845269|gb|EGF94833.1| seryl-tRNA synthetase [Brevundimonas diminuta ATCC 11568]
          Length = 427

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 39/247 (15%), Positives = 80/247 (32%), Gaps = 25/247 (10%)

Query: 220 IYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKG--WKI 275
             G   N   E+ ++         +DH  L   + L  F  A   SG  F   KG   ++
Sbjct: 117 PDGEDENGNVEVLKWGEPRTTGPVKDHADLGEALGLLDFEAAAKMSGSRFAVLKGQLARL 176

Query: 276 FQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
            + +  +M      K  Y+E+  P ++       +G    +  ++F              
Sbjct: 177 ERAIGQFMLDLQTGKHGYQEVAPPYMVKDDAMFGTGQLPKFEEDLFR----------AGE 226

Query: 334 FALKPMNCPGHVAVFNHGLKSYREL--PVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQ 388
             L P        +    + S  E+  P+R+A     +R E   +     GL+R   F++
Sbjct: 227 HLLIPTAEVSLTNLVREQILSEDEVAQPLRMAALTPCFRAEAGSAGRDTRGLIRQHQFSK 286

Query: 389 DDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI----MVKLSTRPEKRVGSDALWDDA 444
            +    C  E    E  ++     ++ +                    ++     +W  +
Sbjct: 287 VEMVSICRPEDSEAEHERMTGCAEAVLQALELPYRKVLLCKGDMGFSAQKTYDLEVWLPS 346

Query: 445 ENIMKGV 451
           +N  + +
Sbjct: 347 QNTYREI 353


>gi|325915438|ref|ZP_08177752.1| seryl-tRNA synthetase [Xanthomonas vesicatoria ATCC 35937]
 gi|325538320|gb|EGD10002.1| seryl-tRNA synthetase [Xanthomonas vesicatoria ATCC 35937]
          Length = 426

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 64/188 (34%), Gaps = 15/188 (7%)

Query: 273 WKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M      +  YEE N P +++    + +G    +  ++F  +       +
Sbjct: 171 ARLHRALAQFMLDLHVGEHGYEETNVPLLVNAESMRGTGQLPKFEDDLFQTEV-----GE 225

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
            R + + P +      +    +     LP+R+      +R E         G++R   F 
Sbjct: 226 SRRYLI-PTSEVPLTNIVRDEIVDAERLPLRMTAHSMCFRAEAGSGGRDTRGMIRQHQFE 284

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALWDD 443
           + +    C  +    E  ++      + +  G     V L T              +W  
Sbjct: 285 KVELVTACAPDDSDAEHQRMTRCAEVVLERLGLPYRKVLLCTGDMGFAAIKTYDLEVWLP 344

Query: 444 AENIMKGV 451
           ++N  + +
Sbjct: 345 SQNTYREI 352


>gi|255017620|ref|ZP_05289746.1| seryl-tRNA synthetase [Listeria monocytogenes FSL F2-515]
          Length = 373

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 36/244 (14%), Positives = 86/244 (35%), Gaps = 22/244 (9%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIF 276
           G + +   E+ ++        E + H  L  ++D+          GS  +F+ + G ++ 
Sbjct: 61  GESEDDNVEIRKWGEVRAFDFEPKAHWDLGTDLDILDFENAAKVTGSRFVFYKKLGARLE 120

Query: 277 QTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           + LI++M     +   YEE+  P ++++     +G    +  + F +        +   +
Sbjct: 121 RALINFMMDLHSNEHGYEEMLPPYMVNRASMTGTGQLPKFEEDAFLI--------EAEDY 172

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDA 391
            L P             +    +LP +   F + +R+E   +     GL+R   F + + 
Sbjct: 173 FLIPTAEVPVTNYHREDILKAEDLPRKYTAFSACFRSEAGSAGRDTRGLIRQHQFNKVEL 232

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENI 447
             F   E  +    K+      + +       ++ + T              +W  + N 
Sbjct: 233 VQFVKPEDSYAALEKLTGNAEEVLRRLELPYRVLSMCTADLGFTAAKKYDLEVWIPSYNS 292

Query: 448 MKGV 451
            + +
Sbjct: 293 YREI 296


>gi|229163337|ref|ZP_04291289.1| Alanyl-tRNA synthetase [Bacillus cereus R309803]
 gi|228620118|gb|EEK76992.1| Alanyl-tRNA synthetase [Bacillus cereus R309803]
          Length = 880

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 32/161 (19%), Positives = 66/161 (40%), Gaps = 15/161 (9%)

Query: 44  NGK-----VCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP 98
           NG+     V +     ++ +++ +     RS  V  H+  H++ +A++ +        G 
Sbjct: 531 NGQNLHKVVVEEGTLTKDAAVKAVIDTKNRSSVVKNHTATHLLHQALKDVLGMHVNQAGS 590

Query: 99  -IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAY 157
            +  +   +DF       +DEL +IE+ + E I           + E+A+E+        
Sbjct: 591 LVTSERLRFDFSHFGQVQADELEKIERIVNEKIWESIDVEISQKAIEEAKEMGAMALFGE 650

Query: 158 KVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
           K          + V + + G++  +LC G HV +T  +  F
Sbjct: 651 KY--------GDVVRVVQVGDYSLELCGGCHVDNTASIGIF 683


>gi|126178761|ref|YP_001046726.1| seryl-tRNA synthetase [Methanoculleus marisnigri JR1]
 gi|166222743|sp|A3CTP4|SYS_METMJ RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|125861555|gb|ABN56744.1| seryl-tRNA synthetase [Methanoculleus marisnigri JR1]
          Length = 425

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 39/221 (17%), Positives = 79/221 (35%), Gaps = 20/221 (9%)

Query: 244 RDHRKLAREMDL--FHIAEDGSGVIFWHRKG--WKIFQTLISYMRRKIKD-DYEEINTPQ 298
            +H  LA E     F  A   +G  F+  KG    +   L  +    + +  Y  I  P 
Sbjct: 140 ENHGALAVEHGWADFERAAKIAGSGFYFLKGRLALLDMALQRFAMDILVEHGYTPIIPPY 199

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++++  ++       +   M+ +        D     L   +     A++   +   ++L
Sbjct: 200 MMNRAAYEGVTDLADFENVMYRI--------DGEDEYLIATSEHPMAAMYCDEIFEEKDL 251

Query: 359 PVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           P+RLA     +R E         GL RV  F + +  ++ T EQ ++   ++      ++
Sbjct: 252 PLRLAGLSPCFRREIGAHGLDTKGLFRVHQFHKVEQFIYATPEQSWDLHEELMANAEEVF 311

Query: 416 KDFGFEKIMVKLSTRPEKRV----GSDALWDDAENIMKGVL 452
           +  G    +V + T     V        +W   E   +  +
Sbjct: 312 QRLGLPYRIVSICTGDIGTVAAKKYDLEVWMPREERYREAV 352


>gi|325847052|ref|ZP_08169878.1| histidine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
 gi|325481024|gb|EGC84069.1| histidine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
          Length = 432

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 14/81 (17%), Positives = 30/81 (37%)

Query: 556 IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEAS 615
           ++  +      YA +I N LK+    ++    +     KI       +  +II G +E  
Sbjct: 347 LIIPMDEKLNFYAIDIGNDLKNKGYKVDIYLEDGKFKKKINYADKIGVKKVIIIGQEEYE 406

Query: 616 ERSIGIRRFGSTTTQKVSLLD 636
            + + ++         V + D
Sbjct: 407 NKMVSVKNMEDGNQVSVKIED 427


>gi|316983845|gb|EFV62825.1| alanyl-tRNA synthetase [Neisseria meningitidis H44/76]
 gi|325199806|gb|ADY95261.1| alanyl-tRNA synthetase [Neisseria meningitidis H44/76]
          Length = 874

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 61/143 (42%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFS 115
            S+     ++ R+  +  HS  H+M +A++ +        G  +  +   +D    Q  +
Sbjct: 544 DSVTAKVDDEIRNANMRNHSATHLMHKALRDVLGRHVEQKGSLVTAESTRFDISHPQAVT 603

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           ++E+A++E+++ E I  +       +S E A++         K          E V + +
Sbjct: 604 AEEIAEVERRVNEAILANVAVNAAIMSMEDAQKTGAMMLFGEKY--------GEEVRVLQ 655

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G +  +LC G HV  TG +  F
Sbjct: 656 MGGFSTELCGGTHVSRTGDIGLF 678


>gi|21231048|ref|NP_636965.1| seryl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
 gi|66768947|ref|YP_243709.1| seryl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           8004]
 gi|188992061|ref|YP_001904071.1| seryl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           B100]
 gi|30173176|sp|Q8PA92|SYS_XANCP RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|81305089|sp|Q4UTD4|SYS_XANC8 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|229470725|sp|B0RUV8|SYS_XANCB RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|21112675|gb|AAM40889.1| seryl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
 gi|66574279|gb|AAY49689.1| seryl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           8004]
 gi|167733821|emb|CAP52027.1| unnamed protein product [Xanthomonas campestris pv. campestris]
          Length = 426

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 62/188 (32%), Gaps = 15/188 (7%)

Query: 273 WKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M      +  YEE N P +++    + +G    +  ++F  +  D     
Sbjct: 171 ARLHRALAQFMLDLHVGEHGYEETNVPLLVNADSMRGTGQLPKFEDDLFQTEVGDSKR-- 228

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
                L P +      +    +     LP+R+      +R E         G++R   F 
Sbjct: 229 ----YLIPTSEVPLTNIVRDAIVDAERLPLRMTAHSMCFRAEAGSGGRDTRGMIRQHQFE 284

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +    C+ E    E  ++      + +  G     V L T              +W  
Sbjct: 285 KVELVTACSPEDSEAEHQRMTRCAEVVLEKLGLPYRKVLLCTGDMGFSAIKTYDLEVWLP 344

Query: 444 AENIMKGV 451
           ++   + +
Sbjct: 345 SQATYREI 352


>gi|125974866|ref|YP_001038776.1| seryl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|256003878|ref|ZP_05428865.1| seryl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|281418668|ref|ZP_06249687.1| seryl-tRNA synthetase [Clostridium thermocellum JW20]
 gi|166219869|sp|A3DI04|SYS_CLOTH RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|125715091|gb|ABN53583.1| seryl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|255992216|gb|EEU02311.1| seryl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|281407752|gb|EFB38011.1| seryl-tRNA synthetase [Clostridium thermocellum JW20]
 gi|316939077|gb|ADU73111.1| seryl-tRNA synthetase [Clostridium thermocellum DSM 1313]
          Length = 423

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 85/234 (36%), Gaps = 22/234 (9%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIF 276
           G +     E+ ++    +     + H ++   +D+   ++     G+   F+   G ++ 
Sbjct: 114 GDSDEDNVEVRRWGEPRKFDFTPKPHWEIGENLDILDFSKAAKVTGARFTFYKGLGARLE 173

Query: 277 QTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           + L+++M     D   Y E+  P ++ ++    +G    +  + F V   D        +
Sbjct: 174 RALMNFMLDLHVDKHGYVEVFPPFLVHRNSMIGTGQLPKFEEDAFKVSDTD--------Y 225

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDA 391
            L P        ++   +   ++LP++   + + +R E   +     GL+R   F + + 
Sbjct: 226 FLIPTAEVPVTNMYREQILDVKDLPIKHVAYSACFRAEAGAAGRDTRGLIRQHQFNKVEL 285

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALW 441
             F T E  + E  K+      + +       +VK+                +W
Sbjct: 286 VKFTTPETSYEELEKLTRDAEEVLQMLEIPYRVVKICVGDLGFTAAMKYDIEVW 339


>gi|293604526|ref|ZP_06686931.1| alanine--tRNA ligase [Achromobacter piechaudii ATCC 43553]
 gi|292817107|gb|EFF76183.1| alanine--tRNA ligase [Achromobacter piechaudii ATCC 43553]
          Length = 874

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 60/131 (45%), Gaps = 9/131 (6%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKM 126
           R+  V  HS  H+M +A++ +        G +++ +   +DF ++ P +++++A++E  +
Sbjct: 555 RARTVRNHSATHLMHKALRQVLGAHVQQRGSLVDAEKTRFDFAQDAPMTAEQIARVEAIV 614

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGP 186
              +  + P + Q ++++ A +         K          + V +   G   +LC G 
Sbjct: 615 NAEVLANQPTVAQVMAYDDAVKGGAMALFGEKY--------GDTVRVLDIGFSRELCGGT 666

Query: 187 HVRSTGQVKKF 197
           HV  TG +  F
Sbjct: 667 HVSRTGDIGLF 677


>gi|229048096|ref|ZP_04193669.1| Alanyl-tRNA synthetase [Bacillus cereus AH676]
 gi|228723251|gb|EEL74623.1| Alanyl-tRNA synthetase [Bacillus cereus AH676]
          Length = 880

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 66/161 (40%), Gaps = 15/161 (9%)

Query: 44  NGK-----VCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP 98
           NG+     V +     ++ +++ I     RS  V  H+  H++ +A++ +        G 
Sbjct: 531 NGQNLHKVVVEEGTLTKDAAVKAIIDTKNRSSVVKNHTATHLLHQALKDVLGTHVNQAGS 590

Query: 99  -IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAY 157
            +  +   +DF       +DEL +IE+ + E I           + E+A+E+        
Sbjct: 591 LVTSERLRFDFSHFGQVQADELEKIERMVNEKIWESIDVEISQKAIEEAKEMGAMALFGE 650

Query: 158 KVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
           K          + V + + G++  +LC G HV +T  +  F
Sbjct: 651 KY--------GDVVRVVQVGDYSLELCGGCHVDNTASIGIF 683


>gi|91792571|ref|YP_562222.1| alanyl-tRNA synthetase [Shewanella denitrificans OS217]
 gi|122968878|sp|Q12PX7|SYA_SHEDO RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|91714573|gb|ABE54499.1| alanyl-tRNA synthetase [Shewanella denitrificans OS217]
          Length = 874

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 42/189 (22%), Positives = 73/189 (38%), Gaps = 26/189 (13%)

Query: 27  AESISRSLAKKAVAVA-INGKVCDLSD---------PVREGSIEIIT------PEDPRSL 70
           AES  +   K  ++   IN  V D             V EGSI++ T       +D R  
Sbjct: 498 AESGGQVGDKGVLSAQGINFSVTDTQKFGQATGHQGKVLEGSIKVGTKLAAEVNKDLRQR 557

Query: 71  AVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSDELAQIEKKMQEI 129
             + HS  H++  A++ +        G ++      +DF   +   + EL Q+E+ +   
Sbjct: 558 TELNHSVTHLLHAALRQVIGTHVTQKGSLVNPERLRFDFAHFEGVKAAELKQVEELVNAQ 617

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHV 188
           I  +       ++ ++A+E         K          E V +   G++  +LC G HV
Sbjct: 618 IRCNHELNTAEMAIDEAKEKGAMALFGEKY--------DEKVRVVTMGDFSIELCGGTHV 669

Query: 189 RSTGQVKKF 197
             TG +  F
Sbjct: 670 GRTGDIGLF 678


>gi|78047250|ref|YP_363425.1| seryl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria str.
           85-10]
 gi|325927384|ref|ZP_08188632.1| seryl-tRNA synthetase [Xanthomonas perforans 91-118]
 gi|123585378|sp|Q3BUY8|SYS_XANC5 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|78035680|emb|CAJ23371.1| seryl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria str.
           85-10]
 gi|325542205|gb|EGD13699.1| seryl-tRNA synthetase [Xanthomonas perforans 91-118]
          Length = 426

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 64/188 (34%), Gaps = 15/188 (7%)

Query: 273 WKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M      +  YEE N P +++    + +G    +  ++F  +       +
Sbjct: 171 ARLHRALAQFMLDLHVGEHGYEETNVPLLVNADSMRGTGQLPKFEDDLFQTEV-----GE 225

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
            R + + P +      +    +     LP+R+      +R E         G++R   F 
Sbjct: 226 SRRYLI-PTSEVPLTNIVRDEIIDAERLPLRMTAHSMCFRAEAGSGGRDTRGMIRQHQFE 284

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +    C  E    E  ++      + +  G     V L T              +W  
Sbjct: 285 KVELVTACAPEDSDAEHQRMTRCAEVVLEQLGLPYRKVLLCTGDMGFSAIKTYDLEVWLP 344

Query: 444 AENIMKGV 451
           ++N  + +
Sbjct: 345 SQNTYREI 352


>gi|262305735|gb|ACY45460.1| glu- + pro-tRNA synthetase [Endeis laevis]
          Length = 134

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 46/133 (34%), Gaps = 18/133 (13%)

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           G  +    E  + +A GR  Q  T   +  N    F   Y     +      +++  +G 
Sbjct: 1   GGDFTTTVEVYI-NASGRAIQGATSHHLGQNFSKMFEIIY--EDPKTKQKEFVYQNSWGI 57

Query: 531 IERFIGIMIENFKGNLPLWLSP----IQAIVTT----------ITSSAVEYAQEIANLLK 576
             R IG+M      N  L L P    +QAI+              +  ++  + +   L 
Sbjct: 58  TTRTIGVMTMVHGDNSGLVLPPNVASVQAIIIPCGITASLSDEDKNKLIDACETLEQKLT 117

Query: 577 SHHLSIETDFRNE 589
              + + +D R+ 
Sbjct: 118 DSGIRVSSDTRDN 130


>gi|313631521|gb|EFR98803.1| seryl-tRNA synthetase [Listeria seeligeri FSL N1-067]
          Length = 428

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 36/244 (14%), Positives = 86/244 (35%), Gaps = 22/244 (9%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIF 276
           G   +   E+ ++    +   E + H  L  ++D+          GS  +F+ + G ++ 
Sbjct: 115 GETEDDNVEIRKWGEVRDFDFEPKAHWDLGTDLDILDFENAAKVTGSRFVFYKKLGARLE 174

Query: 277 QTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           + LI++M     +   YEE+  P ++++     +G    +  + F +        +   +
Sbjct: 175 RALINFMMDLHSNEHGYEEMLPPYMVNRASMTGTGQLPKFEEDAFLI--------EAEDY 226

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDA 391
            L P             +    +LP +   F + +R+E   +     GL+R   F + + 
Sbjct: 227 FLIPTAEVPVTNYHREDILKAEDLPRKYTAFSACFRSEAGSAGRDTRGLIRQHQFNKVEL 286

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENI 447
             F   E  +    K+      + +       ++ + T              +W  + N 
Sbjct: 287 VQFVKPEDSYVALEKLTGNAEEVLRRLELPYRVLSMCTADLGFTAAKKYDLEVWIPSYNS 346

Query: 448 MKGV 451
            + +
Sbjct: 347 YREI 350


>gi|229163352|ref|ZP_04291304.1| Histidyl-tRNA synthetase 2 [Bacillus cereus R309803]
 gi|228620133|gb|EEK77007.1| Histidyl-tRNA synthetase 2 [Bacillus cereus R309803]
          Length = 423

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 70/413 (16%), Positives = 139/413 (33%), Gaps = 55/413 (13%)

Query: 275 IFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           ++Q +    R   +  +Y+EI TP        +          ++   +      +  R+
Sbjct: 19  LWQYIEGQAREICRRYNYKEIRTPIF---EHTELFLRGVGDTTDIVQKEMYSFQDRGERS 75

Query: 334 FALKPM-NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
             L+P    P   +   + +      P +L   G ++R E   +     R R F Q    
Sbjct: 76  LTLRPEGTAPVVRSYVENKMFGDATQPTKLYYIGQMFRYERPQA----GRYRQFVQFGIE 131

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKI---MVKLSTRPEKRVGSDALWDDAENIMK 449
              + +   +   ++  L +  Y+  G + I   +  L     ++   DAL    E  + 
Sbjct: 132 AIGSNDPAIDA--EVIALAVEFYRGMGLKNIKVVLNSLGDAASRQAHRDALIAHFEPRIG 189

Query: 450 G---------------VLDTIKNSSQDRINT-----GVLLGEGAFYGPK----------- 478
                           +LD  K+ + + ++T       L  + A Y  K           
Sbjct: 190 EFCSDCQSRLEKNPLRILDCKKDRNHELMSTAPSITEYLNEDSAVYYDKVQELLTMMDVP 249

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS--------EKCHPVMIHRAVFGS 530
           FE       G D+   T+    +    F A    S          E   P M       S
Sbjct: 250 FEKDPNLVRGLDYYQHTVFEIMSEAEGFGAITTLSGGGRYNGLVQEIGGPEMPGIGFAMS 309

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
           IER I  + +     LP+    I   V  +   A ++A ++A  L+   LS+E D+ +  
Sbjct: 310 IERLIMAL-KAENIELPIE-HSIDCYVVALGEKAKDHAAKVAFDLRKAGLSVEKDYLDRK 367

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +  + +         + + G+ E  +  I ++   +   ++V+L      + +
Sbjct: 368 MKAQFKSADRLNAKFVAVLGEDELDKGVINLKDMATGGQEEVALDVFASYVAE 420


>gi|42560626|ref|NP_975077.1| seryl-tRNA synthetase [Mycoplasma mycoides subsp. mycoides SC str.
           PG1]
 gi|81829421|sp|Q6MUG5|SYS_MYCMS RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|42492122|emb|CAE76719.1| Serine-tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str.
           PG1]
 gi|301320587|gb|ADK69230.1| serine--tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str.
           Gladysdale]
          Length = 422

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 85/234 (36%), Gaps = 22/234 (9%)

Query: 220 IYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKI 275
            +G +     E+ +  +    +    H ++A ++ L    +     GS  + +   G K+
Sbjct: 117 YFGKSDEDNVEIRKTKHNPLLTHSTPHWEIATKLGLVDFEKGVKLSGSRFLIYTGLGSKL 176

Query: 276 FQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
            + +   + +R  K  Y+EI  P ++++     +G    +  +M+ V            +
Sbjct: 177 VRAIADILLKRHEKHGYKEIFCPLIVNKSAMLGTGQLPKFSEDMYQV---------GEQY 227

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDA 391
            + P +      +  + + +Y  LP++   F   +R E   +     G++R+  F + + 
Sbjct: 228 LI-PTSEVPLTNLHANEILTYDMLPLKYTSFTQCFRQEAGSAGRDTKGMIRLHQFNKVEL 286

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALW 441
                 +Q  NE   +      +   F     +V+L +              +W
Sbjct: 287 VKITHPDQSMNELESLVKDAEDVLNMFDLPYRVVELCSGDIGFSSAKTYDLEVW 340


>gi|116874111|ref|YP_850892.1| seryl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|123466700|sp|A0AM81|SYS_LISW6 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|116742989|emb|CAK22113.1| seryl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
          Length = 427

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 35/244 (14%), Positives = 87/244 (35%), Gaps = 22/244 (9%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIF 276
           G + +   E+ ++        E + H  L  ++D+          GS  +F+ + G ++ 
Sbjct: 115 GESEDDNVEIRKWGEVRTFDFEPKAHWDLGTDLDILDFENAAKVTGSRFVFYKKLGARLE 174

Query: 277 QTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           + LI++M     +   YEE+  P ++++     +G    +  + F +        +   +
Sbjct: 175 RALINFMMDLHSNEHGYEEMLPPYMVNRASMTGTGQLPKFEEDAFLI--------EAEDY 226

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDA 391
            L P             +    +LP +   F + +R+E   +     GL+R   F + + 
Sbjct: 227 FLIPTAEVPVTNYHREDILKAEDLPRKYTAFSACFRSEAGSAGRDTRGLIRQHQFNKVEL 286

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENI 447
             F   E  +    K+ +    + +       ++ + T              +W  + + 
Sbjct: 287 VQFVKPEDSYEALEKLTSNAEEVLRRLELPYRVLSMCTADLGFTAAKKYDLEVWIPSYDS 346

Query: 448 MKGV 451
            + +
Sbjct: 347 YREI 350


>gi|213648824|ref|ZP_03378877.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. J185]
          Length = 387

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 21/155 (13%), Positives = 53/155 (34%), Gaps = 6/155 (3%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M     +   Y E   P +++      +G    +  ++F  +  ++   D
Sbjct: 170 ARMHRALSQFMLDLHTEQHGYSENYVPYLVNHDTLYGTGQLPKFAGDLFHTRPLEEEA-D 228

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
              +AL P        +    +    +LP+++      +R+E         GL+R+  F 
Sbjct: 229 SSNYALIPTAEVPLTNLVRDEIIDEDQLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFD 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           + +       E       ++      + +  G   
Sbjct: 289 KVEMVQIVRPEDSMAALEEMTGHAEKVLQLLGLPY 323


>gi|148378026|ref|YP_001252567.1| seryl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
 gi|153931011|ref|YP_001382425.1| seryl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|153937253|ref|YP_001385977.1| seryl-tRNA synthetase [Clostridium botulinum A str. Hall]
 gi|166219865|sp|A7FQ53|SYS_CLOB1 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|166219866|sp|A5HXR1|SYS_CLOBH RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|148287510|emb|CAL81569.1| seryl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
 gi|152927055|gb|ABS32555.1| seryl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|152933167|gb|ABS38666.1| serine--tRNA ligase [Clostridium botulinum A str. Hall]
          Length = 426

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 85/236 (36%), Gaps = 22/236 (9%)

Query: 220 IYGTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWK 274
             G       E+  +    +   E + H  +   +++          GS   F+   G +
Sbjct: 115 PDGDTDEDNIEIRNWSEPTKFDFEPKAHWDIGSNLNILDFERAGKVTGSRFTFYKGLGAR 174

Query: 275 IFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           + ++LISY      +   Y EI  P ++++     +G    +  + F +   D       
Sbjct: 175 LERSLISYFLDTHTEKHGYTEILPPYMVNRTSMIGTGQLPKFEEDAFKISEDD------- 227

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQD 389
            + L P        ++   +    ELP++   + + +R+E   +     GL+R   F + 
Sbjct: 228 -YFLIPTAEVPVTNLYRDEILKGDELPLKHVAYSACFRSEAGSAGRDTRGLVRQHQFNKV 286

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALW 441
           +   F   EQ + E  K+ N   ++ K+ G    +V++                +W
Sbjct: 287 ELVKFTKPEQSYEELEKLTNDAETVLKELGIPYRVVRICKGDLGFTAALKYDLEVW 342


>gi|152978776|ref|YP_001344405.1| seryl-tRNA synthetase [Actinobacillus succinogenes 130Z]
 gi|171704281|sp|A6VNC3|SYS_ACTSZ RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|150840499|gb|ABR74470.1| seryl-tRNA synthetase [Actinobacillus succinogenes 130Z]
          Length = 429

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 62/188 (32%), Gaps = 13/188 (6%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            K+ + L  +M     +   Y E   P +++      +G    +  ++F  K  +     
Sbjct: 171 AKLHRALAQFMLDLHTEKHGYLETYVPYLVNHTTLYGTGQLPKFGEDLFHTKALEGE--- 227

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
            + +AL P        +    + S   LP+++      +R+E         GL+R+  F 
Sbjct: 228 -QPYALIPTAEVPVTNLVRDEILSVENLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFD 286

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E+      ++      + +        V L +              +W  
Sbjct: 287 KVEMVQIVEPEKSMEALEELTGHAEEVLRLLNLPYRKVLLCSGDMGFGACKTYDLEVWLP 346

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 347 AQNTYREI 354


>gi|330996682|ref|ZP_08320560.1| histidine--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
 gi|329572754|gb|EGG54387.1| histidine--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
          Length = 454

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 11/77 (14%), Positives = 31/77 (40%)

Query: 567 YAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS 626
           Y   +    +   +  E    +  +  ++   + K +P + I G+ E +E  + ++   +
Sbjct: 378 YCLPVMAQARRAGVRCEIYPDSAKMKKQMSYANAKAVPFVAIVGENEMNEGKVTLKNMET 437

Query: 627 TTTQKVSLLDAIPILTK 643
                ++  + I I+ K
Sbjct: 438 GEQSLLTPDEMINIIKK 454


>gi|284801894|ref|YP_003413759.1| alanyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284995036|ref|YP_003416804.1| alanyl-tRNA synthetase [Listeria monocytogenes 08-5923]
 gi|284057456|gb|ADB68397.1| alanyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284060503|gb|ADB71442.1| alanyl-tRNA synthetase [Listeria monocytogenes 08-5923]
          Length = 832

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 60/143 (41%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFS 115
            ++++      R   +  H+  H++  A++    E     G ++  D   +DF      +
Sbjct: 501 DTVKLAVDRVKRRETIKNHTATHLLHRALKDTLGEHVNQAGSLVSPDRLRFDFSHFGQIT 560

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            +EL ++E+ + E I      + + +   +A+EL        K          + V + +
Sbjct: 561 EEELTKMEEIVNEKIWEQINVVIEEMPIAEAKELGAMALFGEKY--------GDIVRVVQ 612

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G++  +LC G HVR+T  +  F
Sbjct: 613 VGKYSIELCGGVHVRNTADIGLF 635


>gi|289577292|ref|YP_003475919.1| seryl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
 gi|289527005|gb|ADD01357.1| seryl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
          Length = 423

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 37/236 (15%), Positives = 83/236 (35%), Gaps = 22/236 (9%)

Query: 220 IYGTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHI----AEDGSGVIFWHRKGWK 274
             G +     E+ ++    +   E + H ++  E+D+          GS   F+   G +
Sbjct: 112 PTGDSDEDNVEVRRWGETRKFDFEPKPHWEIGEELDILDFEAAARVTGSRFTFYKGLGAR 171

Query: 275 IFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           + + LI++M     +   Y E+  P ++ +     +G    +  + F V   D       
Sbjct: 172 LERALINFMLDLHVEKHGYTEVFPPFMVHRRSMLGTGQLPKFEEDAFKVYGTD------- 224

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQD 389
            + L P        ++   +    +LP+    + + +R E   +     GL+R   F + 
Sbjct: 225 -YFLIPTAEVPVTNMYRDTIIDGDKLPIYHCAYSACFRQEAGSAGRDTRGLIRQHQFNKV 283

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALW 441
           +   F   ++ + E  K+      + +  G    +V + T              +W
Sbjct: 284 ELVKFTEPDKSYEELEKMTKDAEEVLQLLGLPYRVVAICTGDLGFTASKKYDIEVW 339


>gi|309378363|emb|CBX23009.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 874

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 61/143 (42%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFS 115
            S+     ++ R+  +  HS  H+M +A++ +        G  +  +   +D    Q  +
Sbjct: 544 DSVTAKVDDEIRNANMRNHSATHLMHKALRDVLGGHVEQKGSLVTAESTRFDISHPQAVT 603

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           ++E+A++E+++ E +  +       +S E A++         K          + V + +
Sbjct: 604 AEEIAEVERRVNEAVLANVSVNAAIMSMEDAQKTGAMMLFGEKY--------GDEVRVLQ 655

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G +  +LC G HV  TG +  F
Sbjct: 656 MGGFSTELCGGTHVSRTGDIGLF 678


>gi|295401328|ref|ZP_06811299.1| Threonyl/alanyl tRNA synthetase SAD [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|294976543|gb|EFG52150.1| Threonyl/alanyl tRNA synthetase SAD [Geobacillus
           thermoglucosidasius C56-YS93]
          Length = 238

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 43/160 (26%), Positives = 79/160 (49%), Gaps = 11/160 (6%)

Query: 44  NGKVC---DLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII 100
           NG++    D  + +++G +EI+   D R   +  HS  H++A  + + +    +AIG  I
Sbjct: 64  NGQIVHYVDNIEKLKQGPVEILIDWDRRYKFMRYHSLLHVLAGYLYNKFG--ALAIGNQI 121

Query: 101 -EDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKV 159
            ED    DF  E+P ++++  +IE ++ ++I  D     + +S E+A    E    + K 
Sbjct: 122 FEDRARIDFQFEEPLTNEQFNEIEDEINKLIQEDHQVSIRTVSREEA----ERIDGSIKT 177

Query: 160 EILESIPAKENVTLYRQGEWFDL-CRGPHVRSTGQVKKFF 198
            I    P+ +NV L   G+  +  C G HV+ T ++  F 
Sbjct: 178 VINLLPPSIKNVRLVAIGDIDEQACGGTHVKETKEIGPFQ 217


>gi|302382286|ref|YP_003818109.1| alanyl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264]
 gi|302192914|gb|ADL00486.1| alanyl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264]
          Length = 881

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 37/166 (22%), Positives = 68/166 (40%), Gaps = 19/166 (11%)

Query: 45  GKVCDLSDPVREGSIEIITPE------DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP 98
           G +   +  V  G++ I T        D R      HS AH++  A++++        G 
Sbjct: 528 GDLYAHTIEVTSGTLAIGTRAQLRAAPDARLTTRANHSAAHLVHAALKNVLGPHVAQKGQ 587

Query: 99  IIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE------LFE 151
           +++ +   +DF    P + DELA+IE ++  +I ++ P   + +  ++A E        E
Sbjct: 588 LVDAERMRFDFSHNAPLTEDELARIETEVNAVIRQNLPAETKLMGPQEAIEAGAVALFGE 647

Query: 152 SKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
              +  +V  L      +           +LC G HV  TG +  F
Sbjct: 648 KYGDEVRVLTLGKSLTSDKP------YSVELCGGTHVARTGDIGLF 687


>gi|160899488|ref|YP_001565070.1| alanyl-tRNA synthetase [Delftia acidovorans SPH-1]
 gi|205830045|sp|A9C0B9|SYA_DELAS RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|160365072|gb|ABX36685.1| alanyl-tRNA synthetase [Delftia acidovorans SPH-1]
          Length = 874

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 30/142 (21%), Positives = 62/142 (43%), Gaps = 9/142 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFS 115
            +++       R+  +  HS  HIM +A++ +  +     G  +  +   +DF   QP +
Sbjct: 546 DAVQAEVDTQLRAATMRNHSVTHIMHKALREVLGDHVQQKGSLVNAERTRFDFAHNQPVT 605

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           ++E+ +IE+++   I  ++P   + +  E A+          K          ++V +  
Sbjct: 606 AEEIREIERRVNAEILANTPTDARVMDIESAKATGAMMLFGEKY--------GDSVRVLD 657

Query: 176 QGEWFDLCRGPHVRSTGQVKKF 197
            G   +LC G HV+ TG +  F
Sbjct: 658 IGSSRELCGGTHVQRTGDIGLF 679


>gi|15677445|ref|NP_274601.1| alanyl-tRNA synthetase [Neisseria meningitidis MC58]
 gi|20532266|sp|Q9JYG6|SYA_NEIMB RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|7226845|gb|AAF41948.1| alanyl-tRNA synthetase [Neisseria meningitidis MC58]
          Length = 874

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 61/143 (42%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFS 115
            S+     ++ R+  +  HS  H+M +A++ +        G  +  +   +D    Q  +
Sbjct: 544 DSVTAKVDDEIRNANMRNHSATHLMHKALRDVLGRHVEQKGSLVTAESTRFDISHPQAVT 603

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           ++E+A++E+++ E I  +       +S E A++         K          E V + +
Sbjct: 604 AEEIAEVERRVNEAILANVAVNAAIMSMEDAQKTGAMMLFGEKY--------GEEVRVLQ 655

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G +  +LC G HV  TG +  F
Sbjct: 656 MGGFSTELCGGTHVSRTGDIGLF 678


>gi|1841704|emb|CAB06653.1| histidyl tRNA Synthetase [Oryza sativa Japonica Group]
          Length = 494

 Score = 61.7 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 49/357 (13%), Positives = 124/357 (34%), Gaps = 27/357 (7%)

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRE 357
           V  +    +  + + Y+ +        +T++               + +  + +K ++R+
Sbjct: 158 VYRRDNPSKGRYREFYQCDFDIA-GVYETMEPDFEVIKVLTELLDQLDIGTYEIKLNHRK 216

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRV--RGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           L   + E   V   +       + ++  + F Q    +   K        KI +L+ +  
Sbjct: 217 LLDGMLEICGVPPEKFRTVCSSIDKLDKQTFEQVKKELVDEKGISNETADKIGDLVKTRG 276

Query: 416 KDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFY 475
                   + K  ++     GS    ++ E I+   LD      +   +  +  G   + 
Sbjct: 277 PPLEVLLELRKEGSKFMGNAGSVTALNELE-ILFKALDKANAIGKIVFDLSLARGLDYYT 335

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
           G  +E + K       Q G+I        R++        ++   V +   +    ER  
Sbjct: 336 GVIYEAVFKGTT----QVGSIAAGG----RYDNLVGMFSGKQVPAVGVSLGI----ERVF 383

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            IM +       +  +  + +V+ I    +  A E+ + L +  +  E       +  +I
Sbjct: 384 AIMEQQEMEKNQIRATETEVLVSIIGKDLI-LAAELVSELWNAGIKAEF-----KLTTRI 437

Query: 596 RE----HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
           +      +   IP +++ G+ E S   + ++   ++  ++V   +   +L ++   P
Sbjct: 438 QNHLKYATQSGIPWMVLVGESEISSGKVKLKNLAASQEEEVDRTEFAQVLKQKLRNP 494


>gi|296327394|ref|ZP_06869943.1| histidine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
 gi|296155509|gb|EFG96277.1| histidine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
          Length = 413

 Score = 61.3 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 64/399 (16%), Positives = 131/399 (32%), Gaps = 63/399 (15%)

Query: 288 KDDYEEINTPQVLDQHLWQ--QSGHWDSYRANMFAVKCADDTIKDLR-TFALKPMNCPGH 344
              Y  + TP   +  L++       D     M+  K   D    LR       + C   
Sbjct: 34  NYGYNFVKTPIFEETELFKRGIGEATDVVEKEMYTFKDRGDRSITLRPENTASLVRCYLE 93

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
            A++     S      R    GS++R E   +     R R F Q    VF   E+     
Sbjct: 94  NAIYAKEEIS------RFYYNGSMFRYERPQA----GRQREFNQIGLEVFG--EKSPKVD 141

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            ++  +     +  G   + VK+++   K   +    +      K  LD +    +DRIN
Sbjct: 142 AEVIAIGYKFLEKLGITDLEVKINSVGSKASRTVYR-EKLIEHFKSHLDDMCEDCRDRIN 200

Query: 465 TGVL-------LGEGAFY--GPKF-EYILKDAIGR----------------DWQCGTIQV 498
              L        GE  FY   P   +Y+ +D                    +       +
Sbjct: 201 RNPLRLLDCKVDGEKDFYKSAPSIIDYLFEDERKHYDDVKKYLDVFGIKYTEDPTLVRGL 260

Query: 499 DFNLPSRFNAFYVN------------SHS---EKCHPVMIHRAVFGSIERFIGIMIENFK 543
           D+   + F                    +   E     +        +ER + ++ EN+ 
Sbjct: 261 DYYSSTVFEIVTNKLGSQGTVLGGGRYDNLLKELGDKDIPAVGFATGVERIMMLLEENYP 320

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
            N P         +  +  +  E A +IA  L+ + + +  D+  + +   +++    + 
Sbjct: 321 KNTPD------VYIAWLGENTSETALKIAESLRDNDIKVYIDYSEKGMKSHMKKADKLET 374

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
              +I G+ E ++  + ++ F +   +++ + + I  + 
Sbjct: 375 RYCVILGEDELNKGIVLLKDFSTREQKEIKIEEIINYIK 413


>gi|213962016|ref|ZP_03390281.1| seryl-tRNA synthetase [Capnocytophaga sputigena Capno]
 gi|213955369|gb|EEB66686.1| seryl-tRNA synthetase [Capnocytophaga sputigena Capno]
          Length = 423

 Score = 61.3 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 35/218 (16%), Positives = 71/218 (32%), Gaps = 20/218 (9%)

Query: 241 SEKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEIN 295
            E   H +LA++ DL          G+G   +  KG K+ + LI+Y + +  +  Y E  
Sbjct: 138 KEALPHWELAKKYDLIDFELGVKLTGAGFPVYKGKGAKLQRALITYFLDKNTEAGYNEFQ 197

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
            P V+++           Y       K        +    L P        +F   L + 
Sbjct: 198 VPHVVNE--------ASGYGTGQLPDKEGQMYHIGVDNLYLIPTAEVPVTNIFRDTLLNE 249

Query: 356 RELPVRLAEFGSVYRNEPSG---SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
            +LP+    +   +R E       + GL R+  F + +       +  +     +   + 
Sbjct: 250 SDLPICCTAYTPCFRREAGSYGAHVRGLNRLHQFDKVEIVRIEHPDNSYKALEGMIEHVK 309

Query: 413 SIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAEN 446
            I  +      +++L                ++  A+ 
Sbjct: 310 GILNELKLPYHILRLCGGDLGFTSAITYDFEVYSTAQE 347


>gi|154248002|ref|YP_001418960.1| alanyl-tRNA synthetase [Xanthobacter autotrophicus Py2]
 gi|205830288|sp|A7IMR0|SYA_XANP2 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|154162087|gb|ABS69303.1| alanyl-tRNA synthetase [Xanthobacter autotrophicus Py2]
          Length = 884

 Score = 61.3 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 60/146 (41%), Gaps = 10/146 (6%)

Query: 53  PVREGSIEIITPEDPRSLAVI-RHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDK 110
            ++ G+  ++  +  R  AV   HS  H++ EA++ +  +     G  +  D   +DF  
Sbjct: 542 TLKRGTALVLEVDHARRAAVRANHSATHLLHEALRRVLGDHVAQKGSLVAPDRLRFDFSH 601

Query: 111 EQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYK----VEILESIP 166
            +P S  ELA++E      + R+ P   + ++ + A           K    V ++    
Sbjct: 602 PKPLSGGELAEVETIANRFVLRNEPVETRIMAVDDAITSGARALFGEKYGDEVRVVSMGT 661

Query: 167 AKENVTLYRQGEWFDLCRGPHVRSTG 192
              N   Y      +LC G HV+ TG
Sbjct: 662 DDGNGAPY----SVELCGGTHVKRTG 683


>gi|295109896|emb|CBL23849.1| alanyl-tRNA synthetase [Ruminococcus obeum A2-162]
          Length = 879

 Score = 61.3 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 57/142 (40%), Gaps = 10/142 (7%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSS 116
           ++ +   E  R      HS  H++ +A++++        G  +  D   +DF   Q  + 
Sbjct: 549 TVSLKVNEQARRDTEKNHSATHLLQKALKTVLGSHVEQKGSLVTPDRLRFDFAHFQAMTP 608

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
           DE+ + E  + + I    P     +  E+A++         K          + V +   
Sbjct: 609 DEIVEAEALVNKEIQAALPVETNIMDIEEAKKSGAMALFGEKY--------DQKVRVVSM 660

Query: 177 GEWF-DLCRGPHVRSTGQVKKF 197
           G++  +LC G HVR+T  +  F
Sbjct: 661 GDFSRELCGGTHVRNTSSIMLF 682


>gi|271500826|ref|YP_003333851.1| seryl-tRNA synthetase [Dickeya dadantii Ech586]
 gi|270344381|gb|ACZ77146.1| seryl-tRNA synthetase [Dickeya dadantii Ech586]
          Length = 431

 Score = 61.3 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 63/188 (33%), Gaps = 10/188 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M         YEE   P +++      +G    ++ ++F  +  ++   D
Sbjct: 171 ARLHRALAQFMLNLHTAEHGYEEAYVPYLVNHATLYGTGQLPKFKEDLFHTRPLEEEA-D 229

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
              +AL P        +    +     LP+++      +R+E       + GL+RV  F 
Sbjct: 230 SSNYALIPTAEVPLTNLVRDEILDEESLPIKMTAHTPCFRSEAGSYGRDMRGLIRVHQFD 289

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E       ++      + +        V L +              +W  
Sbjct: 290 KVEMVQIVRPEDSMQALEELTGHAEKVLQLLKLPYRKVLLCSGDMGFGACKTYDLEVWLP 349

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 350 AQNTYREI 357


>gi|228475224|ref|ZP_04059950.1| histidine--tRNA ligase [Staphylococcus hominis SK119]
 gi|228270835|gb|EEK12237.1| histidine--tRNA ligase [Staphylococcus hominis SK119]
          Length = 425

 Score = 61.3 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 62/425 (14%), Positives = 145/425 (34%), Gaps = 62/425 (14%)

Query: 269 HRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQS--GHWDSYRANMFAVKCAD 325
             +    ++ + + +   +K  +Y+EI TP      L+ +      D  +  M+  K   
Sbjct: 12  LPQESAKWRYIENKLDELMKLYNYKEIRTPIFESTDLFARGVGDSTDVVQKEMYTFKDKG 71

Query: 326 DTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL----PVRLAEFGSVYRNEPSGSLHGLM 381
           D     R+  L+P    G  AV    +++  +     P++L   G ++R E         
Sbjct: 72  D-----RSITLRP---EGTAAVVRSYIENKMQGEPNQPIKLYYNGPMFRYERKQK----G 119

Query: 382 RVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK---IMVKLSTRPEKRVGSD 438
           R R F Q        +    +   ++  +++ IY+ FG +    ++  +  +  ++  ++
Sbjct: 120 RYRQFNQFGVEAIGAENPSIDA--EVLAMVMHIYESFGLKHLKLVINSIGDQASRKEYNE 177

Query: 439 ALWDDAENIMKGVLDTIKNSSQDR----INTGVL-LGEGAFYGPKFEYILKDAIGRDWQC 493
           AL    E ++    +  ++         ++  +    E   + P+    L D     ++ 
Sbjct: 178 ALMKHFEPVIDTFCNDCQSRLHTNPMRILDCKIDRDKEAVKHAPRITDYLNDESKAYYEA 237

Query: 494 GTIQVDFNL--------------PSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
               +D                      AF +   +      +      G     + ++ 
Sbjct: 238 VKHHLDQLDINYVEDPNLVRGLDYYTHTAFELMMDNPNYDGAITTLCGGGRYNGLLELLD 297

Query: 540 ENFKGNLPLWLS-------------------PIQAIVTTITSSAVEYAQEIANLLKSHHL 580
              +  +   LS                        V T+   A +Y+ ++ N L+ H +
Sbjct: 298 GPKQTGIGFALSIERLLLALEEEDIELNVDEDFDLFVVTMGKKAEQYSVKLLNDLRKHGV 357

Query: 581 SIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
             + D+ N  I  ++++         I+ GD+E     I ++   +  T+ + L + +  
Sbjct: 358 KADKDYLNRKIKGQMKQADRLNAKYTIVIGDQELDNNKIDVKEMSTGETKTIQLDEVVSF 417

Query: 641 LTKES 645
             KE 
Sbjct: 418 FNKEK 422


>gi|15612587|ref|NP_240890.1| seryl-tRNA synthetase [Bacillus halodurans C-125]
 gi|20139939|sp|Q9KGN4|SYS_BACHD RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|10172636|dbj|BAB03743.1| seryl-tRNA synthetase [Bacillus halodurans C-125]
          Length = 425

 Score = 61.3 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 47/329 (14%), Positives = 102/329 (31%), Gaps = 43/329 (13%)

Query: 137 LKQYLSHEKARELFESKKEAYKVEILESIPA-----KENVTLYRQGEWFDLCRGPHVRST 191
            +  +S E A+   E K   + ++ +  +        E +    +     L   P+V   
Sbjct: 51  RRNQVSQEVAQLKREKKDADHLIKEMRDVSDEIKGLDETLRQLDEELDQLLLAIPNVPHE 110

Query: 192 GQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAR 251
                  +   V    W             G   N   E   +          D  + A+
Sbjct: 111 STPVGETEDDNVEVRKW-------------GEVPNFPFEPKAHWDLATALGIVDFERAAK 157

Query: 252 EMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSG 309
                      S   F+   G ++ + LI++M     D   YEE+  P ++++     +G
Sbjct: 158 VTG--------SRFAFYKGAGARLERALINFMMDLHHDKHGYEEVLPPYLVNRTSMTGTG 209

Query: 310 HWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVY 369
               +  + F ++           + L P        +    + S  +LP+    +   +
Sbjct: 210 QLPKFEEDAFKIR--------EEDYFLIPTAEVPVTNLHRDEILSADQLPIAYTAYSMNF 261

Query: 370 RNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK 426
           R+E   +     GL+R   F + +   F   E  ++E  K+      + +       ++ 
Sbjct: 262 RSEAGSAGRDTRGLIRQHQFNKVELVRFVAPEDSYDELEKLTGHAEKVLQLLKLPYRVMS 321

Query: 427 LSTRPEKRV----GSDALWDDAENIMKGV 451
           + T              +W  + N  + +
Sbjct: 322 MCTADLGFTAAKKYDLEVWIPSANTYREI 350


>gi|330683923|gb|EGG95691.1| histidine--tRNA ligase [Staphylococcus epidermidis VCU121]
          Length = 420

 Score = 61.3 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 17/87 (19%), Positives = 38/87 (43%)

Query: 557 VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASE 616
           + T+   A  YA ++ N L+ + +  + D+ N  I  ++++         I+ GD+E   
Sbjct: 334 IVTMGEKADRYAVKLLNELRKNGVKADKDYLNRKIKGQMKQADRLNANYTIVIGDQELEN 393

Query: 617 RSIGIRRFGSTTTQKVSLLDAIPILTK 643
             I I+   +  ++ + L   +    K
Sbjct: 394 NQIDIKNMETGESESIQLDQIVDYFHK 420


>gi|312870368|ref|ZP_07730493.1| histidine--tRNA ligase [Lactobacillus oris PB013-T2-3]
 gi|311094069|gb|EFQ52388.1| histidine--tRNA ligase [Lactobacillus oris PB013-T2-3]
          Length = 425

 Score = 61.3 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 62/426 (14%), Positives = 129/426 (30%), Gaps = 69/426 (16%)

Query: 270 RKGWK--------IFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
            KG          +++ + +  R   +   Y  I TP       ++         +++  
Sbjct: 6   PKGTADLLPGTTGLWEKVEANAREVFRQFGYRGIRTPMF---EDYRVFARNVGDTSDIVE 62

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVF--NHGLKSYRELPVRLAEFGSVYRNEPSGSLH 378
            +  D   K  R  AL+P    G V  +  N         P ++   G ++R E   S  
Sbjct: 63  KEMYDFHDKGDRHIALRPEGTAGVVRAYVENKLYGPEYPKPYKVYYMGPMFRYERPQS-- 120

Query: 379 GLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK--------------IM 424
              R R F Q    V     +     +++  + ++++K FG                   
Sbjct: 121 --GRQREFHQIG--VEALNNESPQIDVEVIAMAMALFKKFGVPNVKLVINTLGDKQVRQD 176

Query: 425 VKLSTRPEKRVGSDALWDDAENIMKG----VLDTIKNSSQDR-------INTGVLLGEGA 473
            + +     +   D L  D++  +      VLD+     Q         ++      +  
Sbjct: 177 YREALINYLKPHYDELSADSQERLYKNPLRVLDSKDEGDQKLVADAPSILDYLDDESQSY 236

Query: 474 FY---------GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN------SHS--- 515
           F          G  +E       G D+   TI    +    F   Y         +    
Sbjct: 237 FDQVQKLLKELGIDYEIDTNMVRGLDYYNHTIFEIMSDSPVFGGGYTTVCAGGRYNGLIS 296

Query: 516 EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIV-TTITSSAVE-YAQEIAN 573
           +   P          +ER + ++ +      P      Q  +         +  A E+ +
Sbjct: 297 QLGGPEEGGIGFGMGVERLMLLLQQENPDFAP----QDQLDLFLASADDQGDNLAFEVLS 352

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            ++   +  + D+    +  +I+E   +      + GD+E SE    ++   +     V 
Sbjct: 353 KVRQQGIVADKDYSGVKVGKQIKEAFRRNAKYFAVFGDREVSEGQFQLKNAATKDAVDVK 412

Query: 634 LLDAIP 639
           + D + 
Sbjct: 413 VADFVA 418


>gi|304413367|ref|ZP_07394840.1| Alanyl-tRNA synthetase [Candidatus Regiella insecticola LSR1]
 gi|304284210|gb|EFL92603.1| Alanyl-tRNA synthetase [Candidatus Regiella insecticola LSR1]
          Length = 893

 Score = 61.3 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 28/148 (18%), Positives = 58/148 (39%), Gaps = 10/148 (6%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGF-YYDFDKEQPFSS 116
           SI      + R    + HS  H++  A++    +     G ++ D +  +DF   Q  + 
Sbjct: 565 SINAAVDAERRHRIRLNHSATHLLHAALRQTLGQHVAQKGSLVNDHYLRFDFSHSQAMTK 624

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
            ++ Q+E ++   I  + P   + ++ E+A++         K          + V +   
Sbjct: 625 AQIQQVENQVNAEIRANLPIETKIMALEEAKKTGAMAFFGEKY--------SDKVRVLTI 676

Query: 177 GEW-FDLCRGPHVRSTGQVKKFFKLMKV 203
           G +  +LC G H   TG +  F    + 
Sbjct: 677 GTFSIELCGGTHTNRTGDIGLFRITAES 704


>gi|254724685|ref|ZP_05186468.1| alanyl-tRNA synthetase [Bacillus anthracis str. A1055]
          Length = 880

 Score = 61.3 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 66/161 (40%), Gaps = 15/161 (9%)

Query: 44  NGK-----VCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP 98
           NG+     V +     ++ +++ I     RS  V  H+  H++ +A++ +        G 
Sbjct: 531 NGQNLHQVVVEEGTLTKDAAVKAIIDTKNRSSVVKNHTATHLLHQALKDVLGTHVNQAGS 590

Query: 99  -IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAY 157
            +  +   +DF       +DEL +IE+ + E I           + E+A+E+        
Sbjct: 591 LVTSERLRFDFSHFGQVQADELEKIERIVNEKIWESIDVEISQKAIEEAKEMGAMALFGE 650

Query: 158 KVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
           K          + V + + G++  +LC G HV +T  +  F
Sbjct: 651 KY--------GDVVRVVQVGDYSLELCGGCHVDNTASIGIF 683


>gi|229032038|ref|ZP_04188021.1| Alanyl-tRNA synthetase [Bacillus cereus AH1271]
 gi|228729283|gb|EEL80277.1| Alanyl-tRNA synthetase [Bacillus cereus AH1271]
          Length = 880

 Score = 61.3 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 66/161 (40%), Gaps = 15/161 (9%)

Query: 44  NGK-----VCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP 98
           NG+     V +     ++ +++ I     RS  V  H+  H++ +A++ +        G 
Sbjct: 531 NGQNLHKVVVEEGTLTKDAAVKAIIDTKNRSSVVKNHTATHLLHQALKDVLGTHVNQAGS 590

Query: 99  -IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAY 157
            +  +   +DF       +DEL +IE+ + E I           + E+A+E+        
Sbjct: 591 LVTSERLRFDFSHFGQVQADELEKIERIVNEKIWESIDVEISQKAIEEAKEMGAMALFGE 650

Query: 158 KVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
           K          + V + + G++  +LC G HV +T  +  F
Sbjct: 651 KY--------GDVVRVVQVGDYSLELCGGCHVDNTASIGIF 683


>gi|228948102|ref|ZP_04110386.1| Alanyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|229123929|ref|ZP_04253121.1| Alanyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|228659231|gb|EEL14879.1| Alanyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|228811460|gb|EEM57797.1| Alanyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
          Length = 880

 Score = 61.3 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 66/161 (40%), Gaps = 15/161 (9%)

Query: 44  NGK-----VCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP 98
           NG+     V +     ++ +++ I     RS  V  H+  H++ +A++ +        G 
Sbjct: 531 NGQNLHQVVVEEGTLTKDAAVKAIIDTKNRSSVVKNHTATHLLHQALKDVLGTHVNQAGS 590

Query: 99  -IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAY 157
            +  +   +DF       +DEL +IE+ + E I           + E+A+E+        
Sbjct: 591 LVTSERLRFDFSHFGQVQADELEKIERIVNEKIWESIDVEISQKAIEEAKEMGAMALFGE 650

Query: 158 KVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
           K          + V + + G++  +LC G HV +T  +  F
Sbjct: 651 KY--------GDVVRVVQVGDYSLELCGGCHVDNTASIGIF 683


>gi|30264458|ref|NP_846835.1| alanyl-tRNA synthetase [Bacillus anthracis str. Ames]
 gi|47529915|ref|YP_021264.1| alanyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49187280|ref|YP_030532.1| alanyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|65321756|ref|ZP_00394715.1| COG0013: Alanyl-tRNA synthetase [Bacillus anthracis str. A2012]
 gi|165872747|ref|ZP_02217375.1| alanyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167636505|ref|ZP_02394802.1| alanyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|167638586|ref|ZP_02396862.1| alanyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|170689638|ref|ZP_02880820.1| alanyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|170709398|ref|ZP_02899809.1| alanyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|177653242|ref|ZP_02935494.1| alanyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190566972|ref|ZP_03019888.1| alanyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|227817167|ref|YP_002817176.1| alanyl-tRNA synthetase [Bacillus anthracis str. CDC 684]
 gi|229602565|ref|YP_002868676.1| alanine--tRNA ligase [Bacillus anthracis str. A0248]
 gi|254684144|ref|ZP_05148004.1| alanyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066]
 gi|254736491|ref|ZP_05194197.1| alanyl-tRNA synthetase [Bacillus anthracis str. Western North
           America USA6153]
 gi|254741529|ref|ZP_05199216.1| alanyl-tRNA synthetase [Bacillus anthracis str. Kruger B]
 gi|254751372|ref|ZP_05203409.1| alanyl-tRNA synthetase [Bacillus anthracis str. Vollum]
 gi|254757704|ref|ZP_05209731.1| alanyl-tRNA synthetase [Bacillus anthracis str. Australia 94]
 gi|33301676|sp|Q81LK0|SYA_BACAN RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|30259116|gb|AAP28321.1| alanine--tRNA ligase [Bacillus anthracis str. Ames]
 gi|47505063|gb|AAT33739.1| alanyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49181207|gb|AAT56583.1| alanyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|164711523|gb|EDR17072.1| alanyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167513434|gb|EDR88804.1| alanyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|167528098|gb|EDR90895.1| alanyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|170125697|gb|EDS94613.1| alanyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|170666408|gb|EDT17189.1| alanyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|172081524|gb|EDT66596.1| alanyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190561963|gb|EDV15932.1| alanyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|227003572|gb|ACP13315.1| alanine--tRNA ligase [Bacillus anthracis str. CDC 684]
 gi|229266973|gb|ACQ48610.1| alanine--tRNA ligase [Bacillus anthracis str. A0248]
          Length = 880

 Score = 61.3 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 66/161 (40%), Gaps = 15/161 (9%)

Query: 44  NGK-----VCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP 98
           NG+     V +     ++ +++ I     RS  V  H+  H++ +A++ +        G 
Sbjct: 531 NGQNLHQVVVEEGTLTKDAAVKAIIDTKNRSSVVKNHTATHLLHQALKDVLGTHVNQAGS 590

Query: 99  -IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAY 157
            +  +   +DF       +DEL +IE+ + E I           + E+A+E+        
Sbjct: 591 LVTSERLRFDFSHFGQVQADELEKIERIVNEKIWESIDVEISQKAIEEAKEMGAMALFGE 650

Query: 158 KVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
           K          + V + + G++  +LC G HV +T  +  F
Sbjct: 651 KY--------GDVVRVVQVGDYSLELCGGCHVDNTASIGIF 683


>gi|262171855|ref|ZP_06039533.1| seryl-tRNA synthetase [Vibrio mimicus MB-451]
 gi|261892931|gb|EEY38917.1| seryl-tRNA synthetase [Vibrio mimicus MB-451]
          Length = 435

 Score = 61.3 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 26/190 (13%), Positives = 61/190 (32%), Gaps = 11/190 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + +  +M     D   Y E+  P +++      +G    +  ++F  +   +   D
Sbjct: 172 ARLHRAIAQFMLDLHTDQHGYTELYVPYLVNAETLFGTGQLPKFGQDLFHTEPLTEKASD 231

Query: 331 L--RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRG 385
              R  +L P        +    +    ELP+++      +R+E         GL+R+  
Sbjct: 232 EEPRRLSLIPTAEVPVTNLVRDTILDEAELPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQ 291

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALW 441
           F + +       E       ++      + +        V L T              +W
Sbjct: 292 FDKVELVQITRPEDSMAALEELTGHAEKVLQLLELPYRKVILCTGDMGFGSCKTYDLEVW 351

Query: 442 DDAENIMKGV 451
             A+   + +
Sbjct: 352 VPAQKTYREI 361


>gi|229175062|ref|ZP_04302580.1| Alanyl-tRNA synthetase [Bacillus cereus MM3]
 gi|228608430|gb|EEK65734.1| Alanyl-tRNA synthetase [Bacillus cereus MM3]
          Length = 880

 Score = 61.3 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 66/161 (40%), Gaps = 15/161 (9%)

Query: 44  NGK-----VCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP 98
           NG+     V +     ++ +++ I     RS  V  H+  H++ +A++ +        G 
Sbjct: 531 NGQNLHKVVVEEGTLTKDAAVKAIIDTKNRSSVVKNHTATHLLHQALKDVLGTHVNQAGS 590

Query: 99  -IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAY 157
            +  +   +DF       +DEL +IE+ + E I           + E+A+E+        
Sbjct: 591 LVTSERLRFDFSHFGQVQADELEKIERIVNEKIWESIDVEISQKAIEEAKEMGAMALFGE 650

Query: 158 KVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
           K          + V + + G++  +LC G HV +T  +  F
Sbjct: 651 KY--------GDVVRVVQVGDYSLELCGGCHVDNTASIGIF 683


>gi|239616783|ref|YP_002940105.1| histidyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
 gi|239505614|gb|ACR79101.1| histidyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
          Length = 419

 Score = 61.3 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 62/408 (15%), Positives = 130/408 (31%), Gaps = 64/408 (15%)

Query: 274 KIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           K +  + + +R+  K   +EEI TP      L+++S        ++   +      K  R
Sbjct: 17  KYWHYIENTIRKITKLYAFEEIRTPIFEHTELFKRS---VGESTDVVQKEMYTFNDKGGR 73

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
           +  L+P         +       R  P++L   G ++R E   +     R+R F Q    
Sbjct: 74  SLTLRPEGTASVARAYVENGFINRGSPLKLFYVGPMFRYEKPQA----GRLRQFHQFGIE 129

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST---RPEKRVGSDALWDDAENIMK 449
           +  + +   +   ++  L I+  K+ G     + +++      +   ++ L D   + + 
Sbjct: 130 ILGSHDSTAD--YEVIELGINFLKELGISGTKLYINSVGCNKCRPKYNEVLKDYYSDKLS 187

Query: 450 GVLDTIKNSSQ--------DRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFN 501
            + D  K             +I+  V  G      P     L D    D +    Q+ + 
Sbjct: 188 TLCDDCKRRYNTNVLRLLDCKIDKEVAEG-----APSIHNYLCD----DCKIHFEQLQYY 238

Query: 502 LPSRFNAFYVNS------HSEKCHPVMIHRAVFGSIERFIGI-----MIENFKGNLPLWL 550
           L SR   + V+                I   + G+ ++ +       ++E   G     +
Sbjct: 239 LKSRNLDYEVDHKLVRGLDYYTKTAFEIRSNMLGAQDQVLAGGRYDGLVEYIGGKSVPAV 298

Query: 551 SPIQ-----------------------AIVTTITSSAVEYAQEIANLLKSHHLSIETDFR 587
                                        +  +   A   A E A  L+   +S   D  
Sbjct: 299 GFAAGMERMILLLKKMGIEPKVEELNTVAILPMNKEAFVKAFEFAERLRKKGISTFVDVM 358

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
              +  K +  S     I ++ G++E  +  + I+     +   V   
Sbjct: 359 ERNLRNKFKHASRIGAKIAVVIGEEELEKGFVTIKVMEEGSQYTVDSD 406


>gi|163753729|ref|ZP_02160852.1| serine-tRNA synthetase [Kordia algicida OT-1]
 gi|161325943|gb|EDP97269.1| serine-tRNA synthetase [Kordia algicida OT-1]
          Length = 423

 Score = 61.3 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 36/238 (15%), Positives = 76/238 (31%), Gaps = 16/238 (6%)

Query: 199 KLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI 258
           K   VA   +   +    L     +  + ++   +          + H +LA++ D+   
Sbjct: 96  KETSVAELLYTIPNVPNELVPAGNSEDDNEEVFRKGDIPTLHENAQPHWELAKKYDIIDF 155

Query: 259 A----EDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDS 313
                  G+G   +  KG ++ + LI Y + +     Y E   P ++++           
Sbjct: 156 ELGNKITGAGFPVYKGKGARLQRALIQYFLDKNTDAGYTEYQVPHLVNE--------ASG 207

Query: 314 YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP 373
           Y       K             L P        +F   L    +LP+    +   +R E 
Sbjct: 208 YGTGQLPDKEGQMYHVTADDLYLIPTAEVPVTNMFRGDLLKADDLPICCTGYTPCFRREA 267

Query: 374 SG---SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLS 428
                 + GL R+  F + +       E  +     + N +  I ++      +++L 
Sbjct: 268 GSYGAHVRGLNRLHQFDKVEIVRIERPEDSYKALDGMVNHVKEILEELKLPYRILRLC 325


>gi|289436021|ref|YP_003465893.1| hypothetical protein lse_2660 [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289172265|emb|CBH28811.1| serS [Listeria seeligeri serovar 1/2b str. SLCC3954]
          Length = 428

 Score = 61.3 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 36/244 (14%), Positives = 86/244 (35%), Gaps = 22/244 (9%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIF 276
           G   +   E+ ++    +   E + H  L  ++D+          GS  +F+ + G ++ 
Sbjct: 115 GETEDDNVEIRKWGEVRDFDFEPKAHWDLGTDLDILDFENAAKVTGSRFVFYKKLGARLE 174

Query: 277 QTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           + LI++M     +   YEE+  P ++++     +G    +  + F +        +   +
Sbjct: 175 RALINFMMDLHSNEHGYEEMLPPYMVNRASMTGTGQLPKFEEDAFLI--------EAEDY 226

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDA 391
            L P             +    +LP +   F + +R+E   +     GL+R   F + + 
Sbjct: 227 FLIPTAEVPVTNYHREDILKAEDLPRKYTAFSACFRSEAGSAGRDTRGLIRQHQFNKVEL 286

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENI 447
             F   E  +    K+      + +       ++ + T              +W  + N 
Sbjct: 287 VQFVKPEDSYAALEKLTGNAEEVLRRLELPYRVLSMCTADLGFTAAKKYDLEVWIPSYNS 346

Query: 448 MKGV 451
            + +
Sbjct: 347 YREI 350


>gi|146307407|ref|YP_001187872.1| seryl-tRNA synthetase [Pseudomonas mendocina ymp]
 gi|166223271|sp|A4XUX4|SYS_PSEMY RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|145575608|gb|ABP85140.1| seryl-tRNA synthetase [Pseudomonas mendocina ymp]
          Length = 426

 Score = 61.3 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 39/226 (17%), Positives = 80/226 (35%), Gaps = 24/226 (10%)

Query: 242 EKRDHRKLAREMDL--FHIAEDGSGVIFWHRKG--WKIFQTLISYMRRKI--KDDYEEIN 295
           E +DH  L  +     F  A   SG  F   +G   ++ + L  +M      +  YEE  
Sbjct: 135 EIKDHVALGEQHGWLDFETAAKLSGARFALLRGPIARLHRALAQFMINLHTGEHGYEEAY 194

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP ++     Q +G    +  ++F ++      +D     L P        +    +   
Sbjct: 195 TPYLVQAPALQGTGQLPKFEEDLFKIR-----REDQADLYLIPTAEVSLTNIVAGEILDA 249

Query: 356 RELPVRLAEFGSVYRNE--PSGS-LHGLMRVRGFTQDDA-------HVFCTKEQMFNECL 405
           ++LP++       +R+E   SG    G++R   F + +          F   E M     
Sbjct: 250 KQLPLKFVAHTPCFRSEAGASGRDTRGMIRQHQFDKVEMVQIVEPSKSFEALEGMTAHAE 309

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
           ++  L+   Y+        +  S     +     +W  +++  + +
Sbjct: 310 RVLQLLELPYRKLALCTGDMGFS---AVKTYDLEVWVPSQDKYREI 352


>gi|115608274|ref|XP_001177835.1| PREDICTED: similar to Prolyl-tRNA synthetase
           (mitochondrial)(putative), partial [Strongylocentrotus
           purpuratus]
 gi|115609661|ref|XP_794293.2| PREDICTED: similar to Prolyl-tRNA synthetase
           (mitochondrial)(putative), partial [Strongylocentrotus
           purpuratus]
          Length = 89

 Score = 61.3 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 15/94 (15%), Positives = 38/94 (40%), Gaps = 7/94 (7%)

Query: 273 WKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
            +  + LI  +  +++    ++I  P +    LW+ SG +  Y   +  ++   +     
Sbjct: 1   MRALEKLIKVIDTEMQKVGGQKIAMPGMTPSSLWKTSGRYSDYGPELITLQDRHNV---- 56

Query: 332 RTFALKPMNCPGHVAVFN-HGLKSYRELPVRLAE 364
             + L P +      +       S++ LP++L +
Sbjct: 57  -DYCLGPTHEEAVTDIVAGEKTLSHKRLPIKLYQ 89


>gi|42783517|ref|NP_980764.1| alanyl-tRNA synthetase [Bacillus cereus ATCC 10987]
 gi|48428502|sp|P61697|SYA_BACC1 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|42739446|gb|AAS43372.1| alanyl-tRNA synthetase [Bacillus cereus ATCC 10987]
          Length = 880

 Score = 61.3 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 66/161 (40%), Gaps = 15/161 (9%)

Query: 44  NGK-----VCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP 98
           NG+     V +     ++ +++ I     RS  V  H+  H++ +A++ +        G 
Sbjct: 531 NGQNLHKVVVEEGTLTKDAAVKAIIDTKNRSSVVKNHTATHLLHQALKDVLGTHVNQAGS 590

Query: 99  -IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAY 157
            +  +   +DF       +DEL +IE+ + E I           + E+A+E+        
Sbjct: 591 LVTSERLRFDFSHFGQVQADELEKIERIVNEKIWESIDVEISQKAIEEAKEMGAMALFGE 650

Query: 158 KVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
           K          + V + + G++  +LC G HV +T  +  F
Sbjct: 651 KY--------GDVVRVVQVGDYSLELCGGCHVDNTASIGIF 683


>gi|163942153|ref|YP_001647037.1| histidyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|163864350|gb|ABY45409.1| histidyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
          Length = 423

 Score = 61.3 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 70/419 (16%), Positives = 139/419 (33%), Gaps = 55/419 (13%)

Query: 269 HRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
                +++Q +    R   +  +Y+EI TP        +          ++   +     
Sbjct: 13  LPGSVELWQYIEGQARDICRRYNYKEIRTPIF---EHTELFLRGVGDTTDIVQKEMYSFQ 69

Query: 328 IKDLRTFALKPM-NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
            +  R+  L+P    P   +   + +      P +L   G ++R E   +     R R F
Sbjct: 70  DRGERSLTLRPEGTAPVVRSYVENKMFGDATQPTKLYYIGQMFRYERPQA----GRYRQF 125

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI---MVKLSTRPEKRVGSDALWDD 443
            Q       + +   +   ++  L +  Y+  G + I   +  L     ++   DAL   
Sbjct: 126 VQFGIEAIGSNDPAIDA--EVIALAVEFYRGMGLKNIKVVLNSLGDAASRQAHRDALIAH 183

Query: 444 AENIMKG---------------VLDTIKNSSQDRINT-----GVLLGEGAFYGPK----- 478
            E  +                 +LD  K+ + + ++T       L  + A Y  K     
Sbjct: 184 FEPRIGEFCSDCQSRLEKNPLRILDCKKDRNHELMSTAPSITEYLNEDSAVYYDKVQELL 243

Query: 479 ------FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS--------EKCHPVMIH 524
                 FE       G D+   T+    +    F A    S          E   P M  
Sbjct: 244 TMMDVPFEKDPNLVRGLDYYQHTVFEIMSEAEGFGAITTLSGGGRYNGLVQEIGGPEMPG 303

Query: 525 RAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIET 584
                SIER I  + +     LP+    I   V  +   A + A ++A  L+   LS+E 
Sbjct: 304 IGFAMSIERLIMAL-KAENIELPIE-HSIDCYVVALGEKAKDRAAKVAFDLRKAGLSVEK 361

Query: 585 DFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           D+ +  +  + +         + + G+ E  +  I ++   +   ++V+L      + +
Sbjct: 362 DYLDRKMKAQFKSADRLNAKYVAVLGEDELDKGIINLKDMATGGQEEVALDVFASYVAE 420


>gi|308070327|ref|YP_003871932.1| Alanyl-tRNA synthetase (alanine--tRNA ligase) [Paenibacillus
           polymyxa E681]
 gi|305859606|gb|ADM71394.1| Alanyl-tRNA synthetase (Alanine--tRNA ligase) [Paenibacillus
           polymyxa E681]
          Length = 877

 Score = 61.3 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 31/175 (17%), Positives = 68/175 (38%), Gaps = 10/175 (5%)

Query: 32  RSLAKKAVAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE 91
             L K      ++  V +  +     +++    +  R      H+  H++ +A++ +  +
Sbjct: 520 EGLFKAPQGQHVHQVVVEAGELNVGDTVKAEVDQASRGEIEKNHTATHLLHKALKEVLGD 579

Query: 92  VQVAIGPIIEDG-FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELF 150
                G ++E G   +DF      + +ELA IE ++   I        +    ++A+ L 
Sbjct: 580 HVNQAGSLVEPGRLRFDFSHFGSITPEELADIELRVNRAIWSQLDVNIELKPIDEAKALG 639

Query: 151 ESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKFFKLMKVA 204
                  K          + V + + G++  +LC G HV +T Q+  F  + +  
Sbjct: 640 AMALFGEKY--------GDIVRVVKVGDYSIELCGGCHVSNTSQIGLFKLVSESG 686


>gi|291398353|ref|XP_002715854.1| PREDICTED: seryl-tRNA synthetase isoform 1 [Oryctolagus cuniculus]
          Length = 538

 Score = 61.3 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 57/165 (34%), Gaps = 11/165 (6%)

Query: 271 KGWKIF--QTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
           KG  +F  Q LI Y +R      Y  I TP  + + + Q+      +   ++ V      
Sbjct: 197 KGVLVFLEQALIQYALRTLRNRGYTPIYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGSE 256

Query: 328 IKDLRTFALKP---MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLM 381
             D  ++  K     +     A+         +LP++ A   + +R E         G+ 
Sbjct: 257 KSDDNSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGRDTRGIF 316

Query: 382 RVRGFTQDDAHVFCTKEQ--MFNECLKIHNLIISIYKDFGFEKIM 424
           RV  F + +  V+ +      +    ++       Y+  G    +
Sbjct: 317 RVHQFEKIEQFVYSSPHDNKSWEMFEEMIATAEEFYQSLGIPYHI 361


>gi|219685840|ref|ZP_03540648.1| alanine--tRNA ligase [Borrelia garinii Far04]
 gi|219672614|gb|EED29645.1| alanine--tRNA ligase [Borrelia garinii Far04]
          Length = 594

 Score = 61.3 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 56/130 (43%), Gaps = 10/130 (7%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           H+  H++ +A+Q +  +     G  I  +   +DF   +  + DE+ ++E+ +   I   
Sbjct: 456 HTATHLLHKALQLVLGDHVRQKGSNITAERLRFDFVHSEKMTDDEIKKVEEIVNLQIKNS 515

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTG 192
               K  +   +A++         K + L        V++Y  G +  ++C GPHV +T 
Sbjct: 516 LSVKKSIMELSEAQKKGAMALFGEKYDNL--------VSVYEIGGFSLEVCGGPHVENTN 567

Query: 193 QVKKFFKLMK 202
           ++  F    +
Sbjct: 568 ELGTFKIQKE 577


>gi|15613830|ref|NP_242133.1| alanyl-tRNA synthetase [Bacillus halodurans C-125]
 gi|20139935|sp|Q9KDE6|SYA_BACHD RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|10173883|dbj|BAB04986.1| alanyl-tRNA synthetase [Bacillus halodurans C-125]
          Length = 879

 Score = 61.3 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 48/207 (23%), Positives = 85/207 (41%), Gaps = 29/207 (14%)

Query: 15  KNFPVHA-TGSDVA-ESISRSLAKKAVAVAI----NGKVCDLSDPV-REGSIEI------ 61
           K  P +A +G  VA + I R     AV   +    NG+   L   + +EG++++      
Sbjct: 495 KETPFYAESGGQVADKGIIRGANGFAVVSDVQKAPNGQH--LHTVIVKEGTLQVNDQVQA 552

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFSSDELA 120
           I  E  RS  V  H+  H++  A++ +  E     G ++ E+   +DF      + +E  
Sbjct: 553 IVEETERSGIVKNHTATHLLHRALKDVLGEHVNQAGSLVSEERLRFDFSHFGQVTDEEKE 612

Query: 121 QIEKKMQEII--ARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           +IE+ + E I  A       + L   KA        E Y           + V +   G+
Sbjct: 613 KIERIVNEKIWQAIKVNISTKTLDEAKAIGAMALFGEKY----------GDIVRVVEVGD 662

Query: 179 W-FDLCRGPHVRSTGQVKKFFKLMKVA 204
           +  +LC G HV +T ++  F  + +  
Sbjct: 663 YSIELCGGCHVTNTSEIGLFKIVSESG 689


>gi|324328292|gb|ADY23552.1| alanyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 880

 Score = 61.3 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 66/161 (40%), Gaps = 15/161 (9%)

Query: 44  NGK-----VCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP 98
           NG+     V +     ++ +++ I     RS  V  H+  H++ +A++ +        G 
Sbjct: 531 NGQNLHKVVVEEGTLTKDAAVKAIIDTKNRSSVVKNHTATHLLHQALKDVLGTHVNQAGS 590

Query: 99  -IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAY 157
            +  +   +DF       +DEL +IE+ + E I           + E+A+E+        
Sbjct: 591 LVTSERLRFDFSHFGQVQADELEKIERIVNEKIWESIDVEISQKAIEEAKEMGAMALFGE 650

Query: 158 KVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
           K          + V + + G++  +LC G HV +T  +  F
Sbjct: 651 KY--------GDVVRVVQVGDYSLELCGGCHVDNTASIGIF 683


>gi|313621991|gb|EFR92612.1| seryl-tRNA synthetase [Listeria innocua FSL J1-023]
          Length = 436

 Score = 61.3 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 36/244 (14%), Positives = 87/244 (35%), Gaps = 22/244 (9%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIF 276
           G + +   E+ ++    E   E + H  L  ++D+          GS  +F+ + G ++ 
Sbjct: 124 GESEDDNVEIRKWGEVREFDFEPKAHWDLGTDLDILDFENAAKVTGSRFVFYKKLGARLE 183

Query: 277 QTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           + LI++M     +   YEE+  P ++++     +G    +  + F +        +   +
Sbjct: 184 RALINFMMDLHSNEHGYEEMLPPYMVNRASMTGTGQLPKFEEDAFLI--------EAEDY 235

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDA 391
            L P             +    +LP +   F + +R+E   +     GL+R   F + + 
Sbjct: 236 FLIPTAEVPVTNYHREDILKAEDLPRKYTAFSACFRSEAGSAGRDTRGLIRQHQFNKVEL 295

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENI 447
             F   E  +    K+      + +       ++ + T              +W  + + 
Sbjct: 296 VQFVKPEDSYVALEKLTGNAEEVLRRLELPYRVLSMCTADLGFTAAKKYDLEVWIPSYDS 355

Query: 448 MKGV 451
            + +
Sbjct: 356 YREI 359


>gi|304311216|ref|YP_003810814.1| Seryl-tRNA synthetase [gamma proteobacterium HdN1]
 gi|301796949|emb|CBL45162.1| Seryl-tRNA synthetase [gamma proteobacterium HdN1]
          Length = 427

 Score = 61.3 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 25/188 (13%), Positives = 64/188 (34%), Gaps = 16/188 (8%)

Query: 273 WKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + LI +M      ++ Y+E+  P V+++   + +G    +   ++ ++        
Sbjct: 170 ARMHRALIQFMLDTHTSQNGYQEVYVPYVVNEDSLKGTGQLPKFGQELYRLEG------- 222

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
            + F L P        +    + +  ELP + A     +R+E       + G++R   F 
Sbjct: 223 EKAFYLIPTAEVPVTNLMRDEIVAEDELPKKFACHTPCFRSEAGAYGKDVRGMIRQHQFE 282

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E  +     +     SI +       ++ L                +W  
Sbjct: 283 KIELVQIVRPEDSYAALEALTGHAESILQKLNLPYRVITLCGGDIGFSSAKTYDIEVWLP 342

Query: 444 AENIMKGV 451
            +   + +
Sbjct: 343 GQQKYREI 350


>gi|15641123|ref|NP_230755.1| seryl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121591279|ref|ZP_01678574.1| seryl-tRNA synthetase [Vibrio cholerae 2740-80]
 gi|121726249|ref|ZP_01679539.1| seryl-tRNA synthetase [Vibrio cholerae V52]
 gi|147674801|ref|YP_001216578.1| seryl-tRNA synthetase [Vibrio cholerae O395]
 gi|153213559|ref|ZP_01948849.1| seryl-tRNA synthetase [Vibrio cholerae 1587]
 gi|153816911|ref|ZP_01969578.1| seryl-tRNA synthetase [Vibrio cholerae NCTC 8457]
 gi|153823886|ref|ZP_01976553.1| seryl-tRNA synthetase [Vibrio cholerae B33]
 gi|153824956|ref|ZP_01977623.1| seryl-tRNA synthetase [Vibrio cholerae MZO-2]
 gi|153828114|ref|ZP_01980781.1| seryl-tRNA synthetase [Vibrio cholerae 623-39]
 gi|227081283|ref|YP_002809834.1| seryl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|229505295|ref|ZP_04394805.1| seryl-tRNA synthetase [Vibrio cholerae BX 330286]
 gi|229511035|ref|ZP_04400514.1| seryl-tRNA synthetase [Vibrio cholerae B33]
 gi|229515492|ref|ZP_04404951.1| seryl-tRNA synthetase [Vibrio cholerae TMA 21]
 gi|229518156|ref|ZP_04407600.1| seryl-tRNA synthetase [Vibrio cholerae RC9]
 gi|229525721|ref|ZP_04415126.1| seryl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
 gi|229529801|ref|ZP_04419191.1| seryl-tRNA synthetase [Vibrio cholerae 12129(1)]
 gi|229608314|ref|YP_002878962.1| seryl-tRNA synthetase [Vibrio cholerae MJ-1236]
 gi|254225503|ref|ZP_04919113.1| seryl-tRNA synthetase [Vibrio cholerae V51]
 gi|254848239|ref|ZP_05237589.1| seryl-tRNA synthetase [Vibrio cholerae MO10]
 gi|255745522|ref|ZP_05419470.1| seryl-tRNA synthetase [Vibrio cholera CIRS 101]
 gi|258621723|ref|ZP_05716754.1| seryl-tRNA synthetase [Vibrio mimicus VM573]
 gi|258626331|ref|ZP_05721178.1| seryl-tRNA synthetase [Vibrio mimicus VM603]
 gi|262158404|ref|ZP_06029520.1| seryl-tRNA synthetase [Vibrio cholerae INDRE 91/1]
 gi|262165386|ref|ZP_06033123.1| seryl-tRNA synthetase [Vibrio mimicus VM223]
 gi|262170266|ref|ZP_06037953.1| seryl-tRNA synthetase [Vibrio cholerae RC27]
 gi|298498786|ref|ZP_07008593.1| seryl-tRNA synthetase [Vibrio cholerae MAK 757]
 gi|30173216|sp|Q9KSZ6|SYS_VIBCH RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|172047403|sp|A5F2H1|SYS_VIBC3 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|254783501|sp|C3LU07|SYS_VIBCM RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|9655580|gb|AAF94269.1| seryl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121546863|gb|EAX57021.1| seryl-tRNA synthetase [Vibrio cholerae 2740-80]
 gi|121631195|gb|EAX63568.1| seryl-tRNA synthetase [Vibrio cholerae V52]
 gi|124115895|gb|EAY34715.1| seryl-tRNA synthetase [Vibrio cholerae 1587]
 gi|125621973|gb|EAZ50297.1| seryl-tRNA synthetase [Vibrio cholerae V51]
 gi|126512498|gb|EAZ75092.1| seryl-tRNA synthetase [Vibrio cholerae NCTC 8457]
 gi|126518589|gb|EAZ75812.1| seryl-tRNA synthetase [Vibrio cholerae B33]
 gi|146316684|gb|ABQ21223.1| seryl-tRNA synthetase [Vibrio cholerae O395]
 gi|148876356|gb|EDL74491.1| seryl-tRNA synthetase [Vibrio cholerae 623-39]
 gi|149741468|gb|EDM55498.1| seryl-tRNA synthetase [Vibrio cholerae MZO-2]
 gi|227009171|gb|ACP05383.1| seryl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|227012925|gb|ACP09135.1| seryl-tRNA synthetase [Vibrio cholerae O395]
 gi|229333575|gb|EEN99061.1| seryl-tRNA synthetase [Vibrio cholerae 12129(1)]
 gi|229339302|gb|EEO04319.1| seryl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
 gi|229344871|gb|EEO09845.1| seryl-tRNA synthetase [Vibrio cholerae RC9]
 gi|229347261|gb|EEO12221.1| seryl-tRNA synthetase [Vibrio cholerae TMA 21]
 gi|229351000|gb|EEO15941.1| seryl-tRNA synthetase [Vibrio cholerae B33]
 gi|229357518|gb|EEO22435.1| seryl-tRNA synthetase [Vibrio cholerae BX 330286]
 gi|229370969|gb|ACQ61392.1| seryl-tRNA synthetase [Vibrio cholerae MJ-1236]
 gi|254843944|gb|EET22358.1| seryl-tRNA synthetase [Vibrio cholerae MO10]
 gi|255736597|gb|EET91994.1| seryl-tRNA synthetase [Vibrio cholera CIRS 101]
 gi|258581383|gb|EEW06285.1| seryl-tRNA synthetase [Vibrio mimicus VM603]
 gi|258585954|gb|EEW10672.1| seryl-tRNA synthetase [Vibrio mimicus VM573]
 gi|262021281|gb|EEY39995.1| seryl-tRNA synthetase [Vibrio cholerae RC27]
 gi|262025102|gb|EEY43770.1| seryl-tRNA synthetase [Vibrio mimicus VM223]
 gi|262029845|gb|EEY48493.1| seryl-tRNA synthetase [Vibrio cholerae INDRE 91/1]
 gi|297543119|gb|EFH79169.1| seryl-tRNA synthetase [Vibrio cholerae MAK 757]
 gi|327483814|gb|AEA78221.1| Seryl-tRNA synthetase [Vibrio cholerae LMA3894-4]
          Length = 435

 Score = 61.3 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 26/190 (13%), Positives = 61/190 (32%), Gaps = 11/190 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + +  +M     D   Y E+  P +++      +G    +  ++F  +   +   D
Sbjct: 172 ARLHRAIAQFMLDLHTDQHGYTELYVPYLVNAETLFGTGQLPKFGQDLFHTEPLTEKASD 231

Query: 331 L--RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRG 385
              R  +L P        +    +    ELP+++      +R+E         GL+R+  
Sbjct: 232 EEPRRLSLIPTAEVPVTNLVRDTILDEAELPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQ 291

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALW 441
           F + +       E       ++      + +        V L T              +W
Sbjct: 292 FDKVELVQITRPEDSMAALEELTGHAEKVLQLLELPYRKVILCTGDMGFGSCKTYDLEVW 351

Query: 442 DDAENIMKGV 451
             A+   + +
Sbjct: 352 VPAQKTYREI 361


>gi|261210729|ref|ZP_05925021.1| seryl-tRNA synthetase [Vibrio sp. RC341]
 gi|260840214|gb|EEX66794.1| seryl-tRNA synthetase [Vibrio sp. RC341]
          Length = 435

 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 26/190 (13%), Positives = 61/190 (32%), Gaps = 11/190 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + +  +M     D   Y E+  P +++      +G    +  ++F  +   +   D
Sbjct: 172 ARLHRAIAQFMLDLHTDQHGYTELYVPYLVNAETLFGTGQLPKFGQDLFHTEPLTEKASD 231

Query: 331 L--RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRG 385
              R  +L P        +    +    ELP+++      +R+E         GL+R+  
Sbjct: 232 EEPRRLSLIPTAEVPVTNLVRDTILDEAELPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQ 291

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALW 441
           F + +       E       ++      + +        V L T              +W
Sbjct: 292 FDKVELVQITRPEDSMAALEELTGHAEKVLQLLELPYRKVILCTGDMGFGSCKTYDLEVW 351

Query: 442 DDAENIMKGV 451
             A+   + +
Sbjct: 352 VPAQKTYREI 361


>gi|229186628|ref|ZP_04313789.1| Alanyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
 gi|228596887|gb|EEK54546.1| Alanyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
          Length = 880

 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 66/161 (40%), Gaps = 15/161 (9%)

Query: 44  NGK-----VCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP 98
           NG+     V +     ++ +++ I     RS  V  H+  H++ +A++ +        G 
Sbjct: 531 NGQNLHQVVVEEGTLTKDAAVKAIIDTKNRSSVVKNHTATHLLHQALKDVLGTHVNQAGS 590

Query: 99  -IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAY 157
            +  +   +DF       +DEL +IE+ + E I           + E+A+E+        
Sbjct: 591 LVTSERLRFDFSHFGQVQADELEKIERIVNEKIWESIDVEISQKAIEEAKEMGAMALFGE 650

Query: 158 KVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
           K          + V + + G++  +LC G HV +T  +  F
Sbjct: 651 KY--------GDVVRVVQVGDYSLELCGGCHVDNTASIGIF 683


>gi|256830391|ref|YP_003159119.1| seryl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
 gi|256579567|gb|ACU90703.1| seryl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
          Length = 427

 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 44/282 (15%), Positives = 100/282 (35%), Gaps = 23/282 (8%)

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRI-YGTAWNTQQELTQYLYFLEES-E 242
           G        + +  K +    A W         S +  G      +E+  +         
Sbjct: 76  GGMSTRIKALDEELKDIDQQTADWVMSIPNVPHSSVPEGVDEADNREVRSWGEKPAMPFS 135

Query: 243 KRDHRKLAREMDL--FHIAEDGSGVIFWHRKGW--KIFQTLISYM--RRKIKDDYEEINT 296
            ++H +L   ++   F  A   +G  F   KGW  K+ + LIS+M   + +++ Y+E+  
Sbjct: 136 PKEHWELGTALNGLDFETAAKITGSRFVILKGWAAKMERALISFMLDVQTMQNGYDEVMP 195

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P ++++     +G    +  ++F +        +   + L P        ++     +  
Sbjct: 196 PVIVNRESLMGTGQLPKFEEDLFHL--------ENTNYYLIPTAEVPVTNIYRDTTLAQS 247

Query: 357 ELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
            LP+    + + +R+E         G++R   F + +   F   +  ++E  K+     S
Sbjct: 248 ALPIAHCAYTACFRSEAGSYGKDTKGMIRQHQFDKVELVRFVHPDTSYDELEKLLGHAES 307

Query: 414 IYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
           I +  G    +V L                +W   ++  + +
Sbjct: 308 ILQKLGLHYRVVTLCAGDLGFSSAKTYDIEVWLPGQDKYREI 349


>gi|118479549|ref|YP_896700.1| alanyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|196034339|ref|ZP_03101748.1| alanyl-tRNA synthetase [Bacillus cereus W]
 gi|196044886|ref|ZP_03112120.1| alanyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|218905583|ref|YP_002453417.1| alanyl-tRNA synthetase [Bacillus cereus AH820]
 gi|225866370|ref|YP_002751748.1| alanyl-tRNA synthetase [Bacillus cereus 03BB102]
 gi|205829983|sp|A0RJ00|SYA_BACAH RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|118418774|gb|ABK87193.1| alanyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|195992881|gb|EDX56840.1| alanyl-tRNA synthetase [Bacillus cereus W]
 gi|196024374|gb|EDX63047.1| alanyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|218536398|gb|ACK88796.1| alanyl-tRNA synthetase [Bacillus cereus AH820]
 gi|225787137|gb|ACO27354.1| alanine--tRNA ligase [Bacillus cereus 03BB102]
          Length = 880

 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 66/161 (40%), Gaps = 15/161 (9%)

Query: 44  NGK-----VCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP 98
           NG+     V +     ++ +++ I     RS  V  H+  H++ +A++ +        G 
Sbjct: 531 NGQNLHQVVVEEGTLTKDAAVKAIIDTKNRSSVVKNHTATHLLHQALKDVLGTHVNQAGS 590

Query: 99  -IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAY 157
            +  +   +DF       +DEL +IE+ + E I           + E+A+E+        
Sbjct: 591 LVTSERLRFDFSHFGQVQADELEKIERIVNEKIWESIDVEISQKAIEEAKEMGAMALFGE 650

Query: 158 KVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
           K          + V + + G++  +LC G HV +T  +  F
Sbjct: 651 KY--------GDVVRVVQVGDYSLELCGGCHVDNTASIGIF 683


>gi|147920334|ref|YP_685893.1| glycyl-tRNA synthetase [uncultured methanogenic archaeon RC-I]
 gi|110621289|emb|CAJ36567.1| glycyl-tRNA synthetase [uncultured methanogenic archaeon RC-I]
          Length = 577

 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 17/96 (17%), Positives = 35/96 (36%), Gaps = 3/96 (3%)

Query: 550 LSPIQAIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIII 607
           ++PI   V  +         A EIA  LK+    +E D    TI  + R +     P  +
Sbjct: 468 VAPITVAVLPLLSKDPLASRAAEIARGLKAAGYFVEYDESG-TIGKRYRRNDEAGTPFCV 526

Query: 608 ICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
               +   + ++ +R   S    +        ++++
Sbjct: 527 TVDHQTIEDGTVTVRDRDSMAQIRYPADGLAGLISE 562



 Score = 54.0 bits (128), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 39/201 (19%), Positives = 64/201 (31%), Gaps = 59/201 (29%)

Query: 256 FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDS 313
           F I    SG   +   G  + + +    RR     + + EI  P +  + +++ SGH   
Sbjct: 21  FEIYGGASGFYDYGPLGATLKRKIEDAWRRFYCVGEGFYEIEAPTIGVEAIFEASGHVGG 80

Query: 314 Y---------------------------------------RANMFAVKCADDTIKDLRTF 334
           +                                         +          + D+  F
Sbjct: 81  FADPMTTCQKCKESFRADHVIKGEMEIPDGLKKEQMTEIIHQHHIKCPECGGDLGDVYDF 140

Query: 335 ----------------ALKPMNCPGHVAVFNHGLKSYRE-LPVRLAEFGSVYRNEPSGSL 377
                            ++P    G    F   L+ YRE LP  + + G  YRNE S   
Sbjct: 141 NLMFSTWIGPGQKKKGYMRPETAQGMFVDFPRLLRFYREKLPFGVTQIGKSYRNEISPR- 199

Query: 378 HGLMRVRGFTQDDAHVFCTKE 398
            G++R+R FTQ +A VF   +
Sbjct: 200 QGVIRLREFTQAEAEVFVNPQ 220


>gi|254976443|ref|ZP_05272915.1| seryl-tRNA synthetase [Clostridium difficile QCD-66c26]
 gi|255093828|ref|ZP_05323306.1| seryl-tRNA synthetase [Clostridium difficile CIP 107932]
 gi|255315579|ref|ZP_05357162.1| seryl-tRNA synthetase [Clostridium difficile QCD-76w55]
 gi|255518239|ref|ZP_05385915.1| seryl-tRNA synthetase [Clostridium difficile QCD-97b34]
 gi|255651358|ref|ZP_05398260.1| seryl-tRNA synthetase [Clostridium difficile QCD-37x79]
 gi|260684417|ref|YP_003215702.1| seryl-tRNA synthetase [Clostridium difficile CD196]
 gi|260688076|ref|YP_003219210.1| seryl-tRNA synthetase [Clostridium difficile R20291]
 gi|306521188|ref|ZP_07407535.1| seryl-tRNA synthetase [Clostridium difficile QCD-32g58]
 gi|260210580|emb|CBA65152.1| seryl-tRNA synthetase [Clostridium difficile CD196]
 gi|260214093|emb|CBE06284.1| seryl-tRNA synthetase [Clostridium difficile R20291]
          Length = 423

 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 48/343 (13%), Positives = 124/343 (36%), Gaps = 29/343 (8%)

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
           + L  I+K M+    +D    +     ++ R++ +   E  K ++  +  +K    L ++
Sbjct: 9   ENLDCIKKAMERRGEKDFNLDEVVKLDDERRKILQEV-EVMKHKL--NTASKNIPNLIKE 65

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKV---AGAYWRGDSNRPMLSRI-YGTAWNTQQELT 232
           G+  +  +      + ++K   + +K       Y            +  G       E+ 
Sbjct: 66  GKDVENEKIKLKELSDKIKVIDQNLKEVEDKMEYLLMRIPNVPHPEVPQGETDEDNVEVR 125

Query: 233 QYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRRKI 287
            +        E + H ++  E+ +          GS    +   G ++ + L+++     
Sbjct: 126 TWGKTTTFDFESKAHWEIGTELGILDFETASKITGSRFTLYKGLGARLERALLNFYLDTN 185

Query: 288 K--DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
              + Y E+  P + +++ +  +G    +  +MF ++  D        + + P +     
Sbjct: 186 TKVNGYTEVIPPFMANRNSFLGTGQLPKFEEDMFKIEGLD--------YFMIPTSEVPLT 237

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFN 402
            +  + +  + +LP+    +   +R+E   +     GL+R   F + +       E+ +N
Sbjct: 238 NIHANEILKFEQLPINYTAYTPCFRSEAGSAGRDTRGLVRQHQFNKVEMVKIVAPEESYN 297

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRP----EKRVGSDALW 441
           E  K+ N   ++ +       +VK+ T              +W
Sbjct: 298 ELEKLTNNAETMLQLLNLPYRVVKICTGDLGFTASFKYDVEVW 340


>gi|52141119|ref|YP_085711.1| alanyl-tRNA synthetase [Bacillus cereus E33L]
 gi|196039230|ref|ZP_03106536.1| alanine--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|206976027|ref|ZP_03236937.1| alanyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217961878|ref|YP_002340448.1| alanyl-tRNA synthetase [Bacillus cereus AH187]
 gi|222097831|ref|YP_002531888.1| alanyl-tRNA synthetase [Bacillus cereus Q1]
 gi|228917022|ref|ZP_04080582.1| Alanyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|228935709|ref|ZP_04098522.1| Alanyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|229141125|ref|ZP_04269667.1| Alanyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
 gi|229198515|ref|ZP_04325219.1| Alanyl-tRNA synthetase [Bacillus cereus m1293]
 gi|59798503|sp|Q634F6|SYA_BACCZ RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|51974588|gb|AAU16138.1| alanine--tRNA ligase (alanyl-tRNA synthetase) [Bacillus cereus
           E33L]
 gi|196029857|gb|EDX68458.1| alanine--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|206745779|gb|EDZ57176.1| alanyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217067465|gb|ACJ81715.1| alanyl-tRNA synthetase [Bacillus cereus AH187]
 gi|221241889|gb|ACM14599.1| alanine--tRNA ligase (alanyl-tRNA synthetase) [Bacillus cereus Q1]
 gi|228585018|gb|EEK43132.1| Alanyl-tRNA synthetase [Bacillus cereus m1293]
 gi|228642403|gb|EEK98692.1| Alanyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
 gi|228823947|gb|EEM69766.1| Alanyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228842629|gb|EEM87717.1| Alanyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
          Length = 880

 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 66/161 (40%), Gaps = 15/161 (9%)

Query: 44  NGK-----VCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP 98
           NG+     V +     ++ +++ I     RS  V  H+  H++ +A++ +        G 
Sbjct: 531 NGQNLHKVVVEEGTLTKDAAVKAIIDTKNRSSVVKNHTATHLLHQALKDVLGTHVNQAGS 590

Query: 99  -IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAY 157
            +  +   +DF       +DEL +IE+ + E I           + E+A+E+        
Sbjct: 591 LVTSERLRFDFSHFGQVQADELEKIERIVNEKIWESIDVEISQKAIEEAKEMGAMALFGE 650

Query: 158 KVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
           K          + V + + G++  +LC G HV +T  +  F
Sbjct: 651 KY--------GDVVRVVQVGDYSLELCGGCHVDNTASIGIF 683


>gi|146296899|ref|YP_001180670.1| alanyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
 gi|205830010|sp|A4XKP4|SYA_CALS8 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|145410475|gb|ABP67479.1| alanyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
          Length = 881

 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 38/192 (19%), Positives = 82/192 (42%), Gaps = 10/192 (5%)

Query: 56  EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPF 114
           + +I     ++ R   +  H+  H++  +++ I  E     G ++E     +DF   +P 
Sbjct: 545 DNNIFAKVNKNLRLATMKNHTATHLLHSSLRRILGEHATQSGSLVEPERLRFDFAHFEPL 604

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
           S +++ +IEK + +II +  P  K     + A ++  +     K   +        V + 
Sbjct: 605 SEEQIVEIEKMVNDIIQQAIPVEKIQTDLDSAIKMGATALFDEKYSNI--------VRVI 656

Query: 175 RQGEW-FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQ 233
           + G++  +LC G HV +TGQ+  F  + + + A           +++Y    N Q+ L  
Sbjct: 657 KIGDFSMELCGGTHVDNTGQIGMFKIISESSVAAGVRRIEAITGNKVYEFMLNNQKVLKD 716

Query: 234 YLYFLEESEKRD 245
               L+ +   +
Sbjct: 717 IRNKLKANSDSE 728


>gi|325140755|gb|EGC63269.1| alanyl-tRNA synthetase [Neisseria meningitidis CU385]
          Length = 881

 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 61/143 (42%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFS 115
            S+     ++ R+  +  HS  H+M +A++ +        G  +  +   +D    Q  +
Sbjct: 551 DSVTAKVDDEIRNANMRNHSATHLMHKALRDVLGRHVEQKGSLVTAESTRFDISHPQAVT 610

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           ++E+A++E+++ E I  +       +S E A++         K          E V + +
Sbjct: 611 AEEIAEVERRVNEAILANVAVNAAIMSMEDAQKTGAMMLFGEKY--------GEEVRVLQ 662

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G +  +LC G HV  TG +  F
Sbjct: 663 MGGFSTELCGGTHVSRTGDIGLF 685


>gi|307945634|ref|ZP_07660970.1| alanyl-tRNA synthetase [Roseibium sp. TrichSKD4]
 gi|307771507|gb|EFO30732.1| alanyl-tRNA synthetase [Roseibium sp. TrichSKD4]
          Length = 888

 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 37/159 (23%), Positives = 69/159 (43%), Gaps = 13/159 (8%)

Query: 40  AVAINGKVCDLSDPVREGSIEIITPEDPRSLAVI-RHSCAHIMAEAVQSIWPEVQVAIGP 98
           AV +      L  P+       +  +  R  A+   HS  H++ EA++ +        G 
Sbjct: 533 AVKVEDGTLTLDQPLE------LKVDHARRTAIRSNHSATHLVHEALREVLGTHVAQKGS 586

Query: 99  IIEDG-FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE--LFESKKE 155
           ++      +DF   +P S +ELA  EK   EI+ +++P   + ++ + A E        E
Sbjct: 587 MVSPERLRFDFSHPKPLSDEELAVTEKFANEIVLQNAPVETRLMAVDDAIEAGAMALFGE 646

Query: 156 AYKVEILESIPAKENVTLYRQGEWF--DLCRGPHVRSTG 192
            Y  E+   +     +   ++G+ +  +LC G HV+ TG
Sbjct: 647 KYGDEV-RVVSMGTALHGEKEGKPYSLELCGGTHVKRTG 684


>gi|228929433|ref|ZP_04092454.1| Alanyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228830221|gb|EEM75837.1| Alanyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
          Length = 880

 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 66/161 (40%), Gaps = 15/161 (9%)

Query: 44  NGK-----VCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP 98
           NG+     V +     ++ +++ I     RS  V  H+  H++ +A++ +        G 
Sbjct: 531 NGQNLHQVVVEEGTLTKDAAVKAIIDTKNRSSVVKNHTATHLLHQALKDVLGTHVNQAGS 590

Query: 99  -IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAY 157
            +  +   +DF       +DEL +IE+ + E I           + E+A+E+        
Sbjct: 591 LVTSERLRFDFSHFGQVQADELEKIERIVNEKIWESIDVEISQKAIEEAKEMGAMALFGE 650

Query: 158 KVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
           K          + V + + G++  +LC G HV +T  +  F
Sbjct: 651 KY--------GDVVRVVQVGDYSLELCGGCHVDNTASIGIF 683


>gi|228960660|ref|ZP_04122305.1| Alanyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228799024|gb|EEM45996.1| Alanyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
          Length = 880

 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 66/161 (40%), Gaps = 15/161 (9%)

Query: 44  NGK-----VCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP 98
           NG+     V +     ++ +++ I     RS  V  H+  H++ +A++ +        G 
Sbjct: 531 NGQNLHKVVVEEGTLTKDAAVKAIIDTKNRSSVVKNHTATHLLHQALKDVLGTHVNQAGS 590

Query: 99  -IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAY 157
            +  +   +DF       +DEL +IE+ + E I           + E+A+E+        
Sbjct: 591 LVTSERLRFDFSHFGQVQADELEKIERIVNEKIWESIDVEISQKAIEEAKEMGAMALFGE 650

Query: 158 KVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
           K          + V + + G++  +LC G HV +T  +  F
Sbjct: 651 KY--------GDVVRVVQVGDYSLELCGGCHVDNTASIGIF 683


>gi|229158004|ref|ZP_04286075.1| Alanyl-tRNA synthetase [Bacillus cereus ATCC 4342]
 gi|228625457|gb|EEK82213.1| Alanyl-tRNA synthetase [Bacillus cereus ATCC 4342]
          Length = 880

 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 66/161 (40%), Gaps = 15/161 (9%)

Query: 44  NGK-----VCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP 98
           NG+     V +     ++ +++ I     RS  V  H+  H++ +A++ +        G 
Sbjct: 531 NGQNLHKVVVEEGTLTKDAAVKAIIDTKNRSSVVKNHTATHLLHQALKDVLGTHVNQAGS 590

Query: 99  -IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAY 157
            +  +   +DF       +DEL +IE+ + E I           + E+A+E+        
Sbjct: 591 LVTSERLRFDFSHFGQVQADELEKIERIVNEKIWESIDVEISQKAIEEAKEMGAMALFGE 650

Query: 158 KVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
           K          + V + + G++  +LC G HV +T  +  F
Sbjct: 651 KY--------GDVVRVVQVGDYSLELCGGCHVDNTASIGIF 683


>gi|255010901|ref|ZP_05283027.1| histidyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
 gi|313148708|ref|ZP_07810901.1| histidyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
 gi|313137475|gb|EFR54835.1| histidyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
          Length = 454

 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 36/91 (39%)

Query: 553 IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
            Q +          ++  I    ++  +  E       +  ++   ++K IP + I G+ 
Sbjct: 364 TQLLFINFGEKEAAFSMGILAKARAAGIRAEIFPDAAKMKKQMSYANVKNIPFVAIVGEN 423

Query: 613 EASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           E +E    ++   S   Q V+  + I +LTK
Sbjct: 424 EMNEGKAMLKNMESGEQQMVTAEELIGVLTK 454


>gi|154250174|ref|YP_001410999.1| alanyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
 gi|205830091|sp|A7HN59|SYA_FERNB RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|154154110|gb|ABS61342.1| alanyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
          Length = 867

 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 34/165 (20%), Positives = 71/165 (43%), Gaps = 16/165 (9%)

Query: 41  VAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII 100
             +NGK+      V E  ++    E  R   +  H+  HI+  A++ +        G ++
Sbjct: 530 GKLNGKI-----SVNE-KVQSQVDEIKRKSTMRNHTATHILHSALRKVLGSHVRQAGSLV 583

Query: 101 ED-GFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKV 159
           E     +DF   Q  + DE+ +IE  + E+I +  P + +  S+++A +         K 
Sbjct: 584 EPTRLRFDFTHYQALTKDEITKIENIVNEVILKAIPVVTEIKSYDEAVKEGAMALFEEKY 643

Query: 160 EILESIPAKENVTLYRQGEWFDL-CRGPHVRSTGQVKKFFKLMKV 203
                    + V + +  ++ +  C G HV++TG++  F  + + 
Sbjct: 644 --------GDFVRVVKVSDFSEELCGGTHVKNTGEIGLFKIVSES 680


>gi|115351800|ref|YP_773639.1| histidyl-tRNA synthetase [Burkholderia ambifaria AMMD]
 gi|170702838|ref|ZP_02893687.1| histidyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
 gi|172060771|ref|YP_001808423.1| histidyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
 gi|122323093|sp|Q0BEW8|SYH_BURCM RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|229558658|sp|B1YR43|SYH_BURA4 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|115281788|gb|ABI87305.1| histidyl-tRNA synthetase [Burkholderia ambifaria AMMD]
 gi|170132256|gb|EDT00735.1| histidyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
 gi|171993288|gb|ACB64207.1| histidyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
          Length = 446

 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 62/405 (15%), Positives = 126/405 (31%), Gaps = 73/405 (18%)

Query: 289 DDYEEINTPQVLDQHLWQ--QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA 346
             Y+ I TP V    L+        D     M++   A +         ++P N    V 
Sbjct: 42  YGYQNIRTPIVEHTQLFTRGIGEVTDIVEKEMYSFTDALN----GENLTMRPEN-TAAVV 96

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD--DAHVFCTKEQMFNEC 404
             +       + P RL   G ++R+E         R R F Q   +A  F   +      
Sbjct: 97  RASIEHNMLYDGPKRLWYIGPMFRHERPQR----GRYRQFHQVGVEALGFAGPDADA--- 149

Query: 405 LKIHNLIISIYKDFG--------------FEKIMVKLSTRPEKRVGSDALWDDAENIM-- 448
            +I  +   ++ D G               E+   ++         +D L +DA+  +  
Sbjct: 150 -EIIMMCQRLWDDLGLTGIKLEINSLGLAEERAAHRVELIKYLEQFADVLDEDAKRRLYT 208

Query: 449 ---------KGVLDTIKNSSQDRINTGVLLGEGAFYGP-------KFEYILKDAIGRDWQ 492
                       L  I  ++   I+         F G           + +   + R   
Sbjct: 209 NPLRVLDTKNPALQEIAQNAPKLIDFLGDESRAHFEGLQRLLLANNIPFKINPRLVRGLD 268

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIH-------RAVFGS-IERFIGIMIENFKG 544
              + V   +  +  A    +   +  P++            +   IER + ++ E    
Sbjct: 269 YYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQLGGKPTAACGWAMGIERILELLKEED-- 326

Query: 545 NLPLWLSPIQ----AIVTTITSSAVEYAQEIANLLKSHHLSI----ETDFRNETINYKIR 596
                L+P Q      V     +A E A   A  L+   L +      D    +   +++
Sbjct: 327 -----LAPEQEGVDVYVVHQGETAREQAFIAAERLRDTGLDVIFHCSADGAPASFKSQMK 381

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRR-FGSTTTQKVSLLDAIPI 640
                     +I G++E +  ++G++   G+    + ++   +P+
Sbjct: 382 RADASGAAFAVIFGEEEVANGTVGVKALRGAGEEGEKNVQQTVPV 426


>gi|326390337|ref|ZP_08211896.1| seryl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
 gi|325993614|gb|EGD52047.1| seryl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
          Length = 423

 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 36/234 (15%), Positives = 82/234 (35%), Gaps = 22/234 (9%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHI----AEDGSGVIFWHRKGWKIF 276
           G +     E+ ++    +   E + H ++  E+ +          GS   F+   G ++ 
Sbjct: 114 GDSDEDNVEIRRWGEPRKFDFEPKPHWEIGEELGILDFEAAARVTGSRFTFYKGLGARLE 173

Query: 277 QTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           + LI++M     +   Y E+  P ++ +     +G    +  + F V   D        +
Sbjct: 174 RALINFMLDLHIEKHGYTEVFPPFMVHRRSMFGTGQLPKFEEDAFKVYGTD--------Y 225

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDA 391
            L P        ++   +    +LP+    + + +R E   +     GL+R   F + + 
Sbjct: 226 FLIPTAEVPVTNMYRDTIIDGDKLPIYHCAYSACFRQEAGSAGRDTRGLIRQHQFNKVEL 285

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALW 441
             F   ++ + E  K+      + +  G    +V + T              +W
Sbjct: 286 VKFTEPDKSYEELEKMTRDAEEVLQALGLPYRVVAICTGDLGFTASKKYDIEVW 339


>gi|261492574|ref|ZP_05989127.1| alanine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
 gi|261311733|gb|EEY12883.1| alanine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
          Length = 875

 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 24/143 (16%), Positives = 57/143 (39%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFS 115
             +  I   + R    + HS  H++  A++ +  +     G ++ E+   +D  + +  +
Sbjct: 546 DKVNTIVDRERRHAITLNHSATHLLHSALRQVLGDHVAQKGSLVSENILRFDISQPEAIT 605

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
             +L ++E+ +   +  +   + + +  E A+          K          E V +  
Sbjct: 606 KSQLEEVERIVNAKVRENIQVIIEEMDIESAKAKGAMALFGEKY--------GEVVRVVE 657

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
             ++  +LC G HV+ TG +  F
Sbjct: 658 MSDFSIELCGGTHVKQTGDIGLF 680


>gi|254360816|ref|ZP_04976963.1| alanine--tRNA ligase [Mannheimia haemolytica PHL213]
 gi|261495705|ref|ZP_05992149.1| alanine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|153092290|gb|EDN73359.1| alanine--tRNA ligase [Mannheimia haemolytica PHL213]
 gi|261308617|gb|EEY09876.1| alanine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           OVINE]
          Length = 875

 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 24/143 (16%), Positives = 57/143 (39%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFS 115
             +  I   + R    + HS  H++  A++ +  +     G ++ E+   +D  + +  +
Sbjct: 546 DKVNTIVDRERRHAITLNHSATHLLHSALRQVLGDHVAQKGSLVSENILRFDISQPEAIT 605

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
             +L ++E+ +   +  +   + + +  E A+          K          E V +  
Sbjct: 606 KSQLEEVERIVNAKVRENIQVIIEEMDIESAKAKGAMALFGEKY--------GEVVRVVE 657

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
             ++  +LC G HV+ TG +  F
Sbjct: 658 MSDFSIELCGGTHVKQTGDIGLF 680


>gi|300119209|ref|ZP_07056906.1| alanyl-tRNA synthetase [Bacillus cereus SJ1]
 gi|298723429|gb|EFI64174.1| alanyl-tRNA synthetase [Bacillus cereus SJ1]
          Length = 880

 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 66/161 (40%), Gaps = 15/161 (9%)

Query: 44  NGK-----VCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP 98
           NG+     V +     ++ +++ I     RS  V  H+  H++ +A++ +        G 
Sbjct: 531 NGQNLHKVVVEEGTLTKDAAVKAIIDTKNRSSVVKNHTATHLLHQALKDVLGTHVNQAGS 590

Query: 99  -IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAY 157
            +  +   +DF       +DEL +IE+ + E I           + E+A+E+        
Sbjct: 591 LVTSERLRFDFSHLGQVQADELEKIERIVNEKIWESIDVEISQKAIEEAKEMGAMALFGE 650

Query: 158 KVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
           K          + V + + G++  +LC G HV +T  +  F
Sbjct: 651 KY--------GDVVRVVQVGDYSLELCGGCHVDNTASIGIF 683


>gi|237793335|ref|YP_002860887.1| seryl-tRNA synthetase [Clostridium botulinum Ba4 str. 657]
 gi|259511662|sp|C3KXS1|SYS_CLOB6 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|229262324|gb|ACQ53357.1| serine--tRNA ligase [Clostridium botulinum Ba4 str. 657]
          Length = 426

 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 86/236 (36%), Gaps = 22/236 (9%)

Query: 220 IYGTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWK 274
             G       E+  +L   +   E + H  +   +++          GS   F+   G +
Sbjct: 115 PDGETDEDNIEIRNWLEPTKFDFEPKAHWDIGTNLNILDFQRAGKVTGSRFTFYKGLGAR 174

Query: 275 IFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           + + +ISY      +   Y EI  P ++++     +G    +  + F +   D       
Sbjct: 175 LERAVISYFLDTHTEKHGYIEILPPYMVNRTSMIGTGQLPKFEEDAFKISEDD------- 227

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQD 389
            + L P        ++   +    ELP++   + + +R+E   +     GL+R   F + 
Sbjct: 228 -YFLIPTAEVPVTNLYRDEVLKGDELPLKHVAYSACFRSEAGSAGRDTRGLVRQHQFNKV 286

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALW 441
           +   F   EQ ++E  K+ N   ++ K+ G    +V++                +W
Sbjct: 287 ELVKFTKPEQSYDELEKLTNDAETVLKELGIPYRVVRICKGDLGFTAALKYDLEVW 342


>gi|198276280|ref|ZP_03208811.1| hypothetical protein BACPLE_02472 [Bacteroides plebeius DSM 17135]
 gi|198270722|gb|EDY94992.1| hypothetical protein BACPLE_02472 [Bacteroides plebeius DSM 17135]
          Length = 454

 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 11/90 (12%), Positives = 32/90 (35%)

Query: 553 IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
            Q +      +   Y   +   +++  +  E       +  ++   + K +P + I G+ 
Sbjct: 364 TQLLFVNFGEAEAAYVLPVLAQVRAAGIRAEIYPDAAKMKKQMSYANAKMVPFVAIVGEN 423

Query: 613 EASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           E  E  + ++   S     V+  + +  + 
Sbjct: 424 EMKEGKVMLKNMTSGEQSLVTPDELVAAIN 453


>gi|308049679|ref|YP_003913245.1| seryl-tRNA synthetase [Ferrimonas balearica DSM 9799]
 gi|307631869|gb|ADN76171.1| seryl-tRNA synthetase [Ferrimonas balearica DSM 9799]
          Length = 429

 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 62/188 (32%), Gaps = 11/188 (5%)

Query: 273 WKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M      +  Y E+  P +++      +G    +  ++F  +   +    
Sbjct: 170 ARMHRALAQFMLDLHTTEHGYSEMYVPYLVNPDSLFGTGQLPKFGEDLFHTQPLSEDS-- 227

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP--SGS-LHGLMRVRGFT 387
            R  +L P             +    +LPVR+      +R+E   SG    GL+R   F 
Sbjct: 228 DRKLSLIPTAEVPLTNFARDEILDEADLPVRMTAHTPCFRSEAGSSGRDTRGLIRQHQFD 287

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E       ++      + +  G     V L T              +W  
Sbjct: 288 KVELVQLVKPEDSMAALEELTGHAEKVLQLLGLPYRRVVLCTGDMGFGATKTYDLEVWVP 347

Query: 444 AENIMKGV 451
           ++N  + +
Sbjct: 348 SQNKYREI 355


>gi|224476716|ref|YP_002634322.1| alanyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus
           TM300]
 gi|222421323|emb|CAL28137.1| putative alanyl-tRNA synthetase [Staphylococcus carnosus subsp.
           carnosus TM300]
          Length = 876

 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 60/150 (40%), Gaps = 10/150 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFS 115
             +E       R      HS  H++  A++ +  +     G ++E D   +DF    P +
Sbjct: 547 AEVEASVNHADRRDIKKNHSATHLLHAALKEVLGDHVNQAGSLVEGDRLRFDFSHFGPVT 606

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            +EL Q+E+++ E I +      + +  E+A+          K          + V +  
Sbjct: 607 EEELEQVERRVNEEIWKGIDVTIKEMPIEEAKASGAMALFGEKY--------GDVVRVVD 658

Query: 176 QGEW-FDLCRGPHVRSTGQVKKFFKLMKVA 204
              +  +LC G HV++T ++  F  + +  
Sbjct: 659 MSPFSIELCGGIHVQNTSEIGLFKIVSESG 688


>gi|254291533|ref|ZP_04962324.1| seryl-tRNA synthetase [Vibrio cholerae AM-19226]
 gi|150422597|gb|EDN14553.1| seryl-tRNA synthetase [Vibrio cholerae AM-19226]
          Length = 435

 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 26/190 (13%), Positives = 61/190 (32%), Gaps = 11/190 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + +  +M     D   Y E+  P +++      +G    +  ++F  +   +   D
Sbjct: 172 ARLHRAIAQFMLDLHTDKHGYTELYVPYLVNAETLFGTGQLPKFGQDLFHTEPLTEKASD 231

Query: 331 L--RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRG 385
              R  +L P        +    +    ELP+++      +R+E         GL+R+  
Sbjct: 232 EEPRRLSLIPTAEVPVTNLVRDTILDEAELPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQ 291

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALW 441
           F + +       E       ++      + +        V L T              +W
Sbjct: 292 FDKVELVQITRPEDSMAALEELTGHAEKVLQLLELPYRKVILCTGDMGFGSCKTYDLEVW 351

Query: 442 DDAENIMKGV 451
             A+   + +
Sbjct: 352 VPAQKTYREI 361


>gi|47566576|ref|ZP_00237398.1| alanyl-tRNA synthetase [Bacillus cereus G9241]
 gi|47556606|gb|EAL14938.1| alanyl-tRNA synthetase [Bacillus cereus G9241]
          Length = 880

 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 66/161 (40%), Gaps = 15/161 (9%)

Query: 44  NGK-----VCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP 98
           NG+     V +     ++ +++ I     RS  V  H+  H++ +A++ +        G 
Sbjct: 531 NGQNLHKVVVEEGTLTKDAAVKAIIDTKNRSSVVKNHTATHLLHQALKDVLGTHVNQAGS 590

Query: 99  -IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAY 157
            +  +   +DF       +DEL +IE+ + E I           + E+A+E+        
Sbjct: 591 LVTSERLRFDFSHFGQVQADELEKIERIVNEKIWESIDVEISQKAIEEAKEMGAMALFGE 650

Query: 158 KVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
           K          + V + + G++  +LC G HV +T  +  F
Sbjct: 651 KY--------GDVVRVVQVGDYSLELCGGCHVDNTASIGIF 683


>gi|85708967|ref|ZP_01040033.1| AlaS, alanyl-tRNA synthetase [Erythrobacter sp. NAP1]
 gi|85690501|gb|EAQ30504.1| AlaS, alanyl-tRNA synthetase [Erythrobacter sp. NAP1]
          Length = 887

 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 61/147 (41%), Gaps = 9/147 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFS 115
            ++++    + R+     HS  H++  A+++   +     G ++      +DF   +P S
Sbjct: 547 DNVQLDVDAERRTQIRANHSATHLVHAALRNQLGDHVTQKGSLVSQERLRFDFSHPKPLS 606

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYK----VEILESIPAKENV 171
           ++++  IE ++   I  + P   + +S + A E         K    V +L    +  + 
Sbjct: 607 AEDIVAIEDEVNAEILANEPVGTRLMSPDDAVEAGALALFGEKYGDEVRVLSMGRSGGSG 666

Query: 172 TLYRQGEWFDLCRGPHVRSTGQVKKFF 198
             Y      +LC G HV +TG +  F 
Sbjct: 667 RNY----SVELCGGTHVSATGDIGLFR 689


>gi|171779579|ref|ZP_02920535.1| hypothetical protein STRINF_01416 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171281681|gb|EDT47115.1| hypothetical protein STRINF_01416 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 872

 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 40/188 (21%), Positives = 78/188 (41%), Gaps = 21/188 (11%)

Query: 23  GSDVAESISRSLAKKAVAVAI-------NGK---VCDLSDPVREGSIEIITPEDPRSLAV 72
           G  VA+       K  +   +       NG+     ++   +  G+   +  +  R  +V
Sbjct: 504 GGQVADHGVIKNDKGDIVARVIDVQKAPNGQALHTVEVLASLSVGTTYTLEIDAKRRHSV 563

Query: 73  I-RHSCAHIMAEAVQSIWPEVQVAIGPIIEDGF-YYDFDKEQPFSSDELAQIEKKMQEII 130
           I  H+  H++  A+  +  E     G + E+GF  +DF   +  ++DEL QIE+++ + I
Sbjct: 564 IKNHTATHLLHAALHHVIGEHATQAGSLNEEGFLRFDFTHFEAVTADELRQIEEEVNQQI 623

Query: 131 ARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVR 189
               P +      + A+ +        K          +NV +   G++  +LC G HV 
Sbjct: 624 WNAIPVITVETDIDTAKSMGAMALFGEKY--------GKNVRVVTIGDYSIELCGGTHVS 675

Query: 190 STGQVKKF 197
           +T ++  F
Sbjct: 676 NTAEIGIF 683


>gi|91786855|ref|YP_547807.1| seryl-tRNA synthetase [Polaromonas sp. JS666]
 gi|91696080|gb|ABE42909.1| seryl-tRNA synthetase [Polaromonas sp. JS666]
          Length = 468

 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 35/231 (15%), Positives = 80/231 (34%), Gaps = 21/231 (9%)

Query: 242 EKRDHRKLAREMDL-FHIAEDGSGVIFWHRKG--WKIFQTLISYM--RRKIKDDYEEINT 296
           E +DH  + + + L F +    +G  F   KG   ++ + L  +M   + ++  Y E  T
Sbjct: 161 EVKDHVDVGQPLGLDFELGTKLTGSRFTVMKGQLARLHRALAQFMLDVQTLEHGYTECYT 220

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVK---------CADDTIKDLRTFALKPMNCPGHVAV 347
           P +++    + +G    +  ++F V+                  R+  L P +       
Sbjct: 221 PYIVNGDSLRGTGQLPKFEGDLFRVEAGLGLATAHDEQIAELTKRSLYLIPTSEVPLTNF 280

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
               +    +LP++       +R+E         G++R   F + +       E+ +   
Sbjct: 281 VRDEIVPEAQLPLKFTAHTPCFRSEAGSYGRDTRGMIRQHQFDKVEMVQIVHPEKSYEAL 340

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
             +      I +  G    ++ L T              +W  A++  + +
Sbjct: 341 EDMTGHAEMILQKLGLPYRVMLLCTGDMGFGASKTYDLEVWLPAQSTYREI 391


>gi|86140926|ref|ZP_01059485.1| seryl-tRNA synthetase [Leeuwenhoekiella blandensis MED217]
 gi|85832868|gb|EAQ51317.1| seryl-tRNA synthetase [Leeuwenhoekiella blandensis MED217]
          Length = 422

 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 54/318 (16%), Positives = 102/318 (32%), Gaps = 54/318 (16%)

Query: 245 DHRKLAREMDLFHIA----EDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQV 299
            H +LA++ D+          G+G   +  KG ++ + LI+Y + +     Y E+  P +
Sbjct: 142 PHWELAKKYDIIDFELGTKVTGAGFPVYKGKGARLQRALINYFLDKNTAAGYNEVQVPHL 201

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           +++           +       K        +    L P        +F   L   ++LP
Sbjct: 202 VNE--------ASGFGTGQLPDKEGQMYHIGIDDLYLIPTAEVPVTNMFRDSLLEEKDLP 253

Query: 360 VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG 419
           +    +   +R E                                   H   ++    F 
Sbjct: 254 ITCTGYTPCFRREA-----------------------------GSYGAHVRGLNRLHQFD 284

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
             +I      R EK   SDA  D     +K +LD +K   +     G  LG  +     F
Sbjct: 285 KVEI-----VRIEKAEDSDAALDGMVEHVKMILDELKLPYRILRLCGGDLGFTSTLTYDF 339

Query: 480 EYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
           E     A  R  +  ++        +R    Y ++   K     ++ +    + R +  +
Sbjct: 340 EV-FSTAQDRWLEISSVSNFKTFQANRLKLRYRDAEGNKQLAHTLNGSSLA-LPRVLAGI 397

Query: 539 IENF----KGNLPLWLSP 552
           +EN+      N+P  L P
Sbjct: 398 LENYQTEDGINIPEVLIP 415


>gi|312109703|ref|YP_003988019.1| threonyl/alanyl tRNA synthetase SAD [Geobacillus sp. Y4.1MC1]
 gi|311214804|gb|ADP73408.1| Threonyl/alanyl tRNA synthetase SAD [Geobacillus sp. Y4.1MC1]
          Length = 256

 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 43/160 (26%), Positives = 79/160 (49%), Gaps = 11/160 (6%)

Query: 44  NGKVC---DLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII 100
           NG++    D  + +++G +EI+   D R   +  HS  H++A  + + +    +AIG  I
Sbjct: 64  NGQIVHYVDNIEKLKQGPVEILIDWDRRYKFMRYHSLLHVLAGYLYNKFG--ALAIGNQI 121

Query: 101 -EDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKV 159
            ED    DF  E+P ++++  +IE ++ ++I  D     + +S E+A    E    + K 
Sbjct: 122 FEDRARIDFQFEEPLTNEQFNEIEDEINKLIQEDHQVSIRTVSREEA----ERIDGSIKT 177

Query: 160 EILESIPAKENVTLYRQGEWFDL-CRGPHVRSTGQVKKFF 198
            I    P+ +NV L   G+  +  C G HV+ T ++  F 
Sbjct: 178 VINLLPPSIKNVRLVAIGDIDEQACGGTHVKETKEIGPFQ 217


>gi|262305721|gb|ACY45453.1| glu- + pro-tRNA synthetase [Dinothrombium pandorae]
          Length = 135

 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 47/131 (35%), Gaps = 15/131 (11%)

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
           G  +    E  +  A GR  Q  T        S+         SE    + +++  +G  
Sbjct: 1   GGEFTTTIEAYV-AANGRGVQAATSHHLGQNFSKMFEIIYEDPSEAGKKIFVYQNSWGIS 59

Query: 532 ERFIGIMIENFKGNLPLWLSP----IQAIVTTITSSA----------VEYAQEIANLLKS 577
            R IG+MI     +  L L P    +Q I+     +           ++  +E+  +L +
Sbjct: 60  TRSIGVMIMVHSDDKGLVLPPRVAAVQVIIIPCGITVQTKDDEKQHLLQKCEELRQILTA 119

Query: 578 HHLSIETDFRN 588
             +  E+D  +
Sbjct: 120 AGIRCESDLSD 130


>gi|238757608|ref|ZP_04618792.1| Seryl-tRNA synthetase [Yersinia aldovae ATCC 35236]
 gi|238704113|gb|EEP96646.1| Seryl-tRNA synthetase [Yersinia aldovae ATCC 35236]
          Length = 387

 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 61/188 (32%), Gaps = 10/188 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M     +   Y E   P +++      +G    +  ++F  K  ++   D
Sbjct: 170 ARMHRALAQFMLDLHTEKHGYLETYVPYLVNHATLYGTGQLPKFGDDLFHTKPLEEE-SD 228

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
              +AL P        +    +     LP+++      +R+E         GL+R+  F 
Sbjct: 229 SSNYALIPTAEVPVTNLVRDEILEEDSLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFD 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E       ++      + +        + L T              +W  
Sbjct: 289 KVEMVQITRPEDSMAALEELTGHAEKVLQLLDLPYRKMLLCTGDMGFGSSKTYDLEVWLP 348

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 349 AQNTYREI 356


>gi|226940409|ref|YP_002795483.1| alanyl-tRNA synthetase [Laribacter hongkongensis HLHK9]
 gi|226715336|gb|ACO74474.1| Sya [Laribacter hongkongensis HLHK9]
          Length = 877

 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 32/138 (23%), Positives = 64/138 (46%), Gaps = 11/138 (7%)

Query: 63  TPEDPRSLAVIR-HSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDELA 120
           T +  R  A+ R HS  H+M  A++ +  +     G  +  +   +DF   +P S++++A
Sbjct: 552 TIDLHRRRAIQRNHSVTHLMHAALRDVLGKHVTQKGSLVTAERTRFDFSHHEPVSAEQMA 611

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW- 179
           +IE+ +  +I  +     + +S + A++L        K          + V + + G++ 
Sbjct: 612 EIERIVNFVIGANYDVSARLMSMDDAQKLGAMALFGEKY--------GDVVRVLKMGDFS 663

Query: 180 FDLCRGPHVRSTGQVKKF 197
            +LC G HV  TG +  F
Sbjct: 664 TELCGGTHVSRTGDIGFF 681


>gi|171321334|ref|ZP_02910293.1| histidyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
 gi|171093391|gb|EDT38579.1| histidyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
          Length = 446

 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 64/414 (15%), Positives = 126/414 (30%), Gaps = 79/414 (19%)

Query: 289 DDYEEINTPQVLDQHLWQ--QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA 346
             Y+ I TP V    L+        D     M++   A +         ++P N    V 
Sbjct: 42  YGYQNIRTPIVEHTQLFTRGIGEVTDIVEKEMYSFTDALN----GENLTMRPEN-TAAVV 96

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD--DAHVFCTKEQMFNEC 404
             +       + P RL   G ++R+E         R R F Q   +A  F   +      
Sbjct: 97  RASIEHNMLYDGPKRLWYIGPMFRHERPQR----GRYRQFHQVGVEALGFAGPDADA--- 149

Query: 405 LKIHNLIISIYKDFG--------------FEKIMVKLSTRPEKRVGSDALWDDAENIM-- 448
            +I  +   ++ D G               E+   ++         +D L +DA+  +  
Sbjct: 150 -EIIMMCQRLWDDLGLTGIKLEINSLGLAEERAAHRVELIKYLEQFADVLDEDAKRRLYT 208

Query: 449 ---------KGVLDTIKNSSQDRINTGVLLGEGAFYGP-------KFEYILKDAIGRDWQ 492
                       L  I  ++   I+         F G           + +   + R   
Sbjct: 209 NPLRVLDTKNPALQEIAQNAPKLIDFLGDESRAHFEGLQRLLLANNIPFKINPRLVRGLD 268

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIH-------RAVFGS-IERFIGIMIENFKG 544
              + V   +  +  A    +   +  P++            +   IER + ++ E    
Sbjct: 269 YYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQLGGKPTAACGWAMGIERILELLKEED-- 326

Query: 545 NLPLWLSPIQ----AIVTTITSSAVEYAQEIANLLKSHHLSI----ETDFRNETINYKIR 596
                L+P Q      V     +A E A   A  L+   L +      D  + +   +++
Sbjct: 327 -----LAPEQEGVDVYVVHQGETAREQAFIAAERLRDTGLDVIFHCSADGASASFKSQMK 381

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRR-FGSTT------TQKVSLLDAIPILTK 643
                     +I G++E +  ++G++   G+         Q V + +    L  
Sbjct: 382 RADASGAAFAVIFGEEEVANGTVGVKALRGAGEEGEKNAQQTVPVENLTEFLIN 435


>gi|121535965|ref|ZP_01667759.1| alanyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
 gi|121305457|gb|EAX46405.1| alanyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
          Length = 869

 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 48/223 (21%), Positives = 87/223 (39%), Gaps = 35/223 (15%)

Query: 2   PSDIKLTFPDGSIKNFPVH---------ATGS------DVAESISRSLAKKAVAVAINGK 46
            + + L   DG +                T         V +S + +     VAV    K
Sbjct: 458 SARVVLVLQDGKVVEAAHDGQEVALILDVTPFYAEGGGQVGDSGTLTAQYGTVAVVTARK 517

Query: 47  VCDLSD----PVREGSIEI-----ITPEDPRSLAVIR-HSCAHIMAEAVQSIWPEVQVAI 96
           + D +      V EG+I+      I  +  R     R H+  H++  A++ +  E     
Sbjct: 518 LPDGTIYHVGSVTEGTIKPGDMVKIAVDAARRRDASRNHTATHLLHAALKKVLGEHVNQA 577

Query: 97  GP-IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKE 155
           G  +  D   +DF    P + ++LA++E  + E+I R+    +   + E ARE+  +   
Sbjct: 578 GSYVGPDRLRFDFSHFAPVTVEQLAEVENMVNEVILRNIAVGRIETTQELAREMGATALF 637

Query: 156 AYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
             K          E V++    ++  +LC G HV ST ++ +F
Sbjct: 638 GEKY--------GERVSVVIIDDFSKELCGGTHVSSTAEIGQF 672


>gi|145588877|ref|YP_001155474.1| seryl-tRNA synthetase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|189083578|sp|A4SWP6|SYS_POLSQ RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|145047283|gb|ABP33910.1| seryl-tRNA synthetase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
          Length = 436

 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 39/248 (15%), Positives = 81/248 (32%), Gaps = 18/248 (7%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDL-FHIAEDGSGVIFWHRKG--WKIFQ 277
           G      +E+  +        E +DH  L   + L F +A   SG  F   KG   ++ +
Sbjct: 114 GKDETENKEVKVWGEQPMFDFEIKDHVDLGGPLGLDFEVAAKISGSRFVVLKGPIARLHR 173

Query: 278 TLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMF---AVKCADDTIKDL- 331
            L  +M         Y+E+  P +++    + +G    +  ++F        +D   +  
Sbjct: 174 ALAQFMIDTHATHHGYQEVYAPYMVNAASMRGTGQLPKFEEDLFKVPRQMGGEDEGGEAK 233

Query: 332 -RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
              F L P        +    + +   LP++       +R+E       + G++R   F 
Sbjct: 234 TENFYLIPTAEVPVTNLVRDEIVNADTLPLKFVAHTPCFRSEAGSYGRDVRGMIRQHQFD 293

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E       ++      I +        V L T              +W  
Sbjct: 294 KVELVQITKPEHSMQALEELTGHAERILELLELPYRKVLLCTGDMGFGSTKTYDLEVWVP 353

Query: 444 AENIMKGV 451
           ++N  + +
Sbjct: 354 SQNAYREI 361


>gi|114558185|ref|XP_001148068.1| PREDICTED: seryl-tRNA synthetase isoform 1 [Pan troglodytes]
          Length = 553

 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 57/165 (34%), Gaps = 11/165 (6%)

Query: 271 KGWKIF--QTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
           KG  +F  Q LI Y +R      Y  I TP  + + + Q+      +   ++ V      
Sbjct: 236 KGVLVFLEQALIQYALRTLGSRGYIPIYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGSE 295

Query: 328 IKDLRTFALKP---MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLM 381
             D  ++  K     +     A+         +LP++ A   + +R E         G+ 
Sbjct: 296 KSDDNSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGRDTRGIF 355

Query: 382 RVRGFTQDDAHVFCTKEQ--MFNECLKIHNLIISIYKDFGFEKIM 424
           RV  F + +  V+ +      +    ++       Y+  G    +
Sbjct: 356 RVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHI 400


>gi|332994080|gb|AEF04135.1| alanyl-tRNA synthetase [Alteromonas sp. SN2]
          Length = 865

 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 51/126 (40%), Gaps = 10/126 (7%)

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIAR 132
            HS  H++  A++    +     G ++E     +DF   +  +  +L Q+E+++ E I  
Sbjct: 553 NHSATHLLHAALRETLGDHVTQKGSLVEAQRMRFDFSHFEAVTPAQLIQVERRVNEEIRA 612

Query: 133 DSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRST 191
           +     Q +  ++A+          K          E V +   G +  +LC G HV  T
Sbjct: 613 NHALKTQLMDLDEAKASGAMALFGEKY--------DEKVRVVTMGPFSVELCGGTHVNRT 664

Query: 192 GQVKKF 197
           G +  F
Sbjct: 665 GDIGLF 670


>gi|284800367|ref|YP_003412232.1| seryl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284993552|ref|YP_003415320.1| seryl-tRNA synthetase [Listeria monocytogenes 08-5923]
 gi|284055929|gb|ADB66870.1| seryl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284059019|gb|ADB69958.1| seryl-tRNA synthetase [Listeria monocytogenes 08-5923]
          Length = 436

 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 36/244 (14%), Positives = 86/244 (35%), Gaps = 22/244 (9%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIF 276
           G + +   E+ ++        E + H  L  ++D+          GS  +F+ + G ++ 
Sbjct: 124 GESEDDNVEIRKWGEVRAFDFEPKAHWDLGTDLDILDFENAAKVTGSRFVFYKKLGARLE 183

Query: 277 QTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           + LI++M     +   YEE+  P ++++     +G    +  + F +        +   +
Sbjct: 184 RALINFMMDLHSNEHGYEEMLPPYMVNRASMTGTGQLPKFEEDAFLI--------EAEDY 235

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDA 391
            L P             +    +LP +   F + +R+E   +     GL+R   F + + 
Sbjct: 236 FLIPTAEVPVTNYHREDILKAEDLPRKYTAFSACFRSEAGSAGRDTRGLIRQHQFNKVEL 295

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENI 447
             F   E  +    K+      + +       ++ + T              +W  + N 
Sbjct: 296 VQFVKPEDSYVALEKLTGNAEEVLRRLELPYRVLSMCTADLGFTAAKKYDLEVWIPSYNS 355

Query: 448 MKGV 451
            + +
Sbjct: 356 YREI 359


>gi|146340973|ref|YP_001206021.1| seryl-tRNA synthetase [Bradyrhizobium sp. ORS278]
 gi|166200605|sp|A4YV70|SYS_BRASO RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|146193779|emb|CAL77796.1| Seryl-tRNA synthetase (Serine--tRNA ligase) [Bradyrhizobium sp.
           ORS278]
          Length = 442

 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 31/223 (13%), Positives = 70/223 (31%), Gaps = 17/223 (7%)

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFW--HRKG-WKIFQTLISYMRRKI--KDD 290
                   + H  +   + +   +        +   +KG  ++ + +  +M      +  
Sbjct: 131 RRNYAFAPKAHDDIGTALGMDFESAAKLSGARFVVLKKGLARLERAIGQFMLDLHTTEHG 190

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFA-----VKCADDTIKDLRTFALKPMNCPGHV 345
           Y E+N P ++   +   +G    +  + F      +  A D         L P       
Sbjct: 191 YTEVNPPLLVRNDVMFGTGQLPKFEDDQFWAVRGELLIAPDERLKAERLGLIPTAEVALT 250

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFN 402
            +    +   +ELP+RL      +R E   +     G++R   FT+ +     T E   +
Sbjct: 251 NLVRESIVDEKELPMRLTALTPCFRAEAGAAGRDTRGMIRQHQFTKVELVSITTPETSKD 310

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALW 441
           E  ++      + +       ++ L T              +W
Sbjct: 311 EHERMLACAEEVLRRLDLHYRVITLCTGDMGFSSQKTYDIEVW 353


>gi|56090265|ref|NP_001007607.1| seryl-tRNA synthetase, cytoplasmic [Rattus norvegicus]
 gi|81885333|sp|Q6P799|SYSC_RAT RecName: Full=Seryl-tRNA synthetase, cytoplasmic; AltName:
           Full=Serine--tRNA ligase; Short=SerRS; AltName:
           Full=Seryl-tRNA(Ser/Sec) synthetase
 gi|38197710|gb|AAH61765.1| Seryl-tRNA synthetase [Rattus norvegicus]
 gi|149025696|gb|EDL81939.1| seryl-aminoacyl-tRNA synthetase 1, isoform CRA_b [Rattus
           norvegicus]
          Length = 512

 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/165 (18%), Positives = 58/165 (35%), Gaps = 11/165 (6%)

Query: 271 KGWKIF--QTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
           KG  +F  Q LI Y +R      Y  I TP  + + + Q+      +   ++ V      
Sbjct: 197 KGVLVFLEQALIQYALRTLGSRGYTPIYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGSE 256

Query: 328 IKDLRTFALKP---MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLM 381
             D  ++  K     +     A+         +LP++ A F + +R E         G+ 
Sbjct: 257 KSDDSSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGFSTCFRQEVGSHGRDTRGIF 316

Query: 382 RVRGFTQDDAHVFCTKEQ--MFNECLKIHNLIISIYKDFGFEKIM 424
           RV  F + +  V+ +      +    ++       Y+  G    +
Sbjct: 317 RVHQFEKIEQFVYSSPHDNKSWEMFDEMITTAEEFYQSLGIPYHI 361


>gi|328943493|ref|ZP_08240958.1| serine--tRNA ligase [Atopobium vaginae DSM 15829]
 gi|327491462|gb|EGF23236.1| serine--tRNA ligase [Atopobium vaginae DSM 15829]
          Length = 427

 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 62/188 (32%), Gaps = 17/188 (9%)

Query: 272 GWKIFQTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G ++ + LI++ +    +  ++E   P + +      +G    +  ++F V         
Sbjct: 172 GAQMERALINFFIDMHNEAGFKEWWPPVLTNYDSLFGTGQLPKFDEDLFHV--------- 222

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFT 387
                L P        +    +    +LP++   F   +R E   +     G++RV  F 
Sbjct: 223 SNDLYLIPTAEVMLTNLHRDEVLDASQLPLKYTAFTPCFREEAGSAGRDTRGIIRVHEFD 282

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALWDD 443
           + +   F   E   N+   +        +  G    +V L T              +W  
Sbjct: 283 KVEMVKFAKPEDSMNQLESMVAEAEKCLQVLGLAYRVVSLCTGDIGFSACKCYDLEVWLP 342

Query: 444 AENIMKGV 451
           + N  K +
Sbjct: 343 SYNNYKEI 350


>gi|307572335|emb|CAR85514.1| serS [Listeria monocytogenes L99]
          Length = 436

 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 37/244 (15%), Positives = 87/244 (35%), Gaps = 22/244 (9%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIF 276
           G + +   E+ ++    E   E + H  L  ++D+          GS  +F+ + G ++ 
Sbjct: 124 GESEDDNVEIRKWGEVREFDFEPKAHWDLGTDLDILDFENAAKVTGSRFVFYKKLGARLE 183

Query: 277 QTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           + LI++M     +   YEE+  P ++++     +G    +  + F +        +   +
Sbjct: 184 RALINFMMDLHSNEHGYEEMLPPYMVNRASMTGTGQLPKFEEDAFLI--------EAEDY 235

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDA 391
            L P             +    +LP +   F + +R+E   +     GL+R   F + + 
Sbjct: 236 FLIPTAEVPVTNYHREDILKAEDLPRKYTAFSACFRSEAGSAGRDTRGLIRQHQFNKVEL 295

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENI 447
             F   E  +    K+      + +       ++ + T              +W  + N 
Sbjct: 296 VQFVKPEDSYAALEKLTGNAEEVLRRLELPYRVLSMCTADLGFTAAKKYDLEVWIPSYNS 355

Query: 448 MKGV 451
            + +
Sbjct: 356 YREI 359


>gi|291522902|emb|CBK81195.1| seryl-tRNA synthetase [Coprococcus catus GD/7]
          Length = 448

 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 73/193 (37%), Gaps = 11/193 (5%)

Query: 242 EKRDHRKLAREMDL----FHIAEDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINT 296
           E ++H  L   + L      +   G+G   +   G ++   L++Y +   + D YE I  
Sbjct: 156 EPKNHVDLCTNLGLIDYERGVKLAGNGFWIYKGMGARLEWALLNYFIDTHLADGYEMIMP 215

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +L+      +G +  +   ++ +    D   + R   + P       +V+   + +  
Sbjct: 216 PYMLEYQCGLTAGQFPKFADEVYKIANPTD---EGRIHYMLPTAEAALASVYRDEILTEA 272

Query: 357 ELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           +LP +   +   +R E         G++R   F + +   +   E+      ++     +
Sbjct: 273 DLPKKFFSYTPCFRREAGSYRADERGMVRGHQFNKVEMFQYTLPEKSDEAFEELVTKAEN 332

Query: 414 IYKDFGFEKIMVK 426
           + K  GF    VK
Sbjct: 333 LVKGLGFHFRTVK 345


>gi|170760371|ref|YP_001785350.1| seryl-tRNA synthetase [Clostridium botulinum A3 str. Loch Maree]
 gi|238688798|sp|B1L1M0|SYS_CLOBM RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|169407360|gb|ACA55771.1| serine--tRNA ligase [Clostridium botulinum A3 str. Loch Maree]
          Length = 426

 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 85/236 (36%), Gaps = 22/236 (9%)

Query: 220 IYGTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWK 274
             G       E+  +    +   E + H  +   +++          GS   F+   G +
Sbjct: 115 PDGETDEDNIEIRNWSEPTKFDFEPKAHWDIGSNLNILDFERAGKVTGSRFTFYKGLGAR 174

Query: 275 IFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           + ++LISY      +   Y EI  P ++++     +G    +  + F +   D       
Sbjct: 175 LERSLISYFLDTHTEKHGYTEILPPYMVNRTSMIGTGQLPKFEEDAFKISEDD------- 227

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQD 389
            + L P        ++   +    ELP++   + + +R+E   +     GL+R   F + 
Sbjct: 228 -YFLIPTAEVPVTNLYRDEILKGDELPLKHVAYSACFRSEAGSAGRDTRGLVRQHQFNKV 286

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALW 441
           +   F   EQ + E  K+ N   ++ K+ G    +V++                +W
Sbjct: 287 ELVKFTKPEQSYEELEKLTNDAETVLKELGIPYRVVRICKGDLGFTAALKYDLEVW 342


>gi|302871868|ref|YP_003840504.1| alanyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
 gi|302574727|gb|ADL42518.1| alanyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
          Length = 881

 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 61/143 (42%), Gaps = 13/143 (9%)

Query: 67  PRSLA---VIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQI 122
              L    +  H+  H++  A++ I  +     G  +  D   +DF   +P S +++ +I
Sbjct: 553 DEGLRFATMKNHTATHLLHSALRKILGQHAQQSGSQVSADRLRFDFAHYEPLSEEQIIEI 612

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FD 181
           EK +  +I +  P  K     + A  +  +     K   +        V + + G++  +
Sbjct: 613 EKMVNNVIQQAIPVEKIVTDLDSALRMGATALFDEKYSNV--------VRVIKIGDFSME 664

Query: 182 LCRGPHVRSTGQVKKFFKLMKVA 204
           LC G HV +TGQ+  F  + + +
Sbjct: 665 LCGGTHVDNTGQIGMFKIISESS 687


>gi|239617246|ref|YP_002940568.1| seryl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
 gi|259511674|sp|C5CGC3|SYS_KOSOT RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|239506077|gb|ACR79564.1| seryl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
          Length = 424

 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 54/354 (15%), Positives = 103/354 (29%), Gaps = 45/354 (12%)

Query: 107 DFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIP 166
           D  + +  S+ +  + E+         S   K   S ++A    +   E  K   +E   
Sbjct: 35  DKARREAISTSDRKKAERN-----KISSQIAKAKASGDEALA--KELMEKAKDISVEVKE 87

Query: 167 AKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWN 226
             E      +     L   P++          +   V    W      P        A  
Sbjct: 88  LSEKAKKLDEEMRNKLLYIPNIPHESVPVGESEEDNVVVRKWGE----PRQFDFDSLAHW 143

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRK 286
                   + F   ++    R +    +L                  ++ + LI++M   
Sbjct: 144 DLGPNLGMMDFERAAKLSGSRFVILRKEL-----------------ARLERALINFMLDL 186

Query: 287 IKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
                 YEE+  P ++ +   Q +G    +    +          D     L P      
Sbjct: 187 HTREHGYEEVALPHLVKRETMQATGQLPKFEEEAYKT--------DPDDMFLIPTAEVPL 238

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMF 401
           VA     + +  ELP +   +   YR E       + G++RV  F + +   F   ++ +
Sbjct: 239 VAQHRDEILNLNELPRKYTAYTPCYRREAGSYGKDVKGMIRVHQFDKVELVWFVHPDESY 298

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENIMKGV 451
               K+      + K  G    +V L T              +W  + N  K +
Sbjct: 299 EALEKLTADAEEVLKRLGLPYRVVALCTGDLGFAAAKTYDIEVWLPSYNAYKEI 352


>gi|16804784|ref|NP_466269.1| seryl-tRNA synthetase [Listeria monocytogenes EGD-e]
 gi|47095554|ref|ZP_00233163.1| seryl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
 gi|224502844|ref|ZP_03671151.1| seryl-tRNA synthetase [Listeria monocytogenes FSL R2-561]
 gi|254827313|ref|ZP_05232000.1| seryl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
 gi|254830817|ref|ZP_05235472.1| seryl-tRNA synthetase [Listeria monocytogenes 10403S]
 gi|254899796|ref|ZP_05259720.1| seryl-tRNA synthetase [Listeria monocytogenes J0161]
 gi|254912999|ref|ZP_05263011.1| seryl-tRNA synthetase [Listeria monocytogenes J2818]
 gi|254937380|ref|ZP_05269077.1| seryl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|255029506|ref|ZP_05301457.1| seryl-tRNA synthetase [Listeria monocytogenes LO28]
 gi|30173190|sp|Q8Y3T4|SYS_LISMO RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|16412247|emb|CAD00960.1| seryl-trna synthetase [Listeria monocytogenes EGD-e]
 gi|47016164|gb|EAL07088.1| seryl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
 gi|258599694|gb|EEW13019.1| seryl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
 gi|258609986|gb|EEW22594.1| seryl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|293591001|gb|EFF99335.1| seryl-tRNA synthetase [Listeria monocytogenes J2818]
          Length = 427

 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 36/244 (14%), Positives = 86/244 (35%), Gaps = 22/244 (9%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIF 276
           G + +   E+ ++        E + H  L  ++D+          GS  +F+ + G ++ 
Sbjct: 115 GESEDDNVEIRKWGEVRAFDFEPKAHWDLGTDLDILDFENAAKVTGSRFVFYKKLGARLE 174

Query: 277 QTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           + LI++M     +   YEE+  P ++++     +G    +  + F +        +   +
Sbjct: 175 RALINFMMDLHSNEHGYEEMLPPYMVNRASMTGTGQLPKFEEDAFLI--------EAEDY 226

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDA 391
            L P             +    +LP +   F + +R+E   +     GL+R   F + + 
Sbjct: 227 FLIPTAEVPVTNYHREDILKAEDLPRKYTAFSACFRSEAGSAGRDTRGLIRQHQFNKVEL 286

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENI 447
             F   E  +    K+      + +       ++ + T              +W  + N 
Sbjct: 287 VQFVKPEDSYVALEKLTGNAEEVLRRLELPYRVLSMCTADLGFTAAKKYDLEVWIPSYNS 346

Query: 448 MKGV 451
            + +
Sbjct: 347 YREI 350


>gi|333029871|ref|ZP_08457932.1| Histidyl-tRNA synthetase [Bacteroides coprosuis DSM 18011]
 gi|332740468|gb|EGJ70950.1| Histidyl-tRNA synthetase [Bacteroides coprosuis DSM 18011]
          Length = 455

 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 10/91 (10%), Positives = 35/91 (38%), Gaps = 1/91 (1%)

Query: 554 QAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR-NETINYKIREHSIKKIPIIIICGDK 612
           Q +          Y  ++   ++   +  E        +  ++   +  ++  + + G+ 
Sbjct: 365 QLLFINFGEKEAAYCLKVLTKVRKAGIRAEIYPDFGAKMKKQMTYANNNQVAFVAMVGEN 424

Query: 613 EASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           E +E  I ++   +   + V++ + + I+ K
Sbjct: 425 EMAEGKISLKNMETGEQKAVTIEELVNIIKK 455


>gi|212709769|ref|ZP_03317897.1| hypothetical protein PROVALCAL_00817 [Providencia alcalifaciens DSM
           30120]
 gi|212687580|gb|EEB47108.1| hypothetical protein PROVALCAL_00817 [Providencia alcalifaciens DSM
           30120]
          Length = 430

 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 65/188 (34%), Gaps = 10/188 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M     +   Y+E+  P +++      +G    +  ++F  K  ++   D
Sbjct: 170 ARMHRALAQFMLDLHTEKHGYQELYVPYLVNHATLYGTGQLPKFGEDLFHTKPLEEEA-D 228

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
             T+AL P        +    +     LP+++      +R+E         GL+R+  F 
Sbjct: 229 SSTYALIPTAEVPVTNLVRDEILDEDALPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFD 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E+      ++      + +        V L T              +W  
Sbjct: 289 KVELVQIVHPEKSMAALEELTGHAEKVLQLLNLPYRKVLLCTGDIGFGSRKTYDLEVWLP 348

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 349 AQNTYREI 356


>gi|123441840|ref|YP_001005823.1| seryl-tRNA synthetase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|332162217|ref|YP_004298794.1| seryl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica
           105.5R(r)]
 gi|166223310|sp|A1JMG0|SYS_YERE8 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|122088801|emb|CAL11607.1| seryl-tRNA synthetase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|318606280|emb|CBY27778.1| seryl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica
           Y11]
 gi|325666447|gb|ADZ43091.1| seryl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica
           105.5R(r)]
          Length = 430

 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 61/188 (32%), Gaps = 10/188 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M     +   Y E   P +++      +G    +  ++F  K  ++   D
Sbjct: 170 ARMHRALAQFMLDLHTEKHGYLETYVPYLVNHATLYGTGQLPKFGGDLFHTKPLEEE-SD 228

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
              +AL P        +    +     LP+++      +R+E         GL+R+  F 
Sbjct: 229 SSNYALIPTAEVPVTNLVRDEILEEESLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFD 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E       ++      + +        + L T              +W  
Sbjct: 289 KVEMVQITRPEDSMAALEELTGHAEKVLQLLELPYRKMLLCTGDMGFGSSKTYDLEVWLP 348

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 349 AQNTYREI 356


>gi|51245616|ref|YP_065500.1| seryl-tRNA synthetase [Desulfotalea psychrophila LSv54]
 gi|67461743|sp|Q6AMD2|SYS_DESPS RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|50876653|emb|CAG36493.1| probable seryl-tRNA synthetase [Desulfotalea psychrophila LSv54]
          Length = 425

 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 47/244 (19%), Positives = 89/244 (36%), Gaps = 22/244 (9%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGW--KIF 276
           G +     EL  +    E +   + H +L  E D   F  A   SG  F   KG+  ++ 
Sbjct: 119 GNSDEENIELRVWGKKPEFTFTPKAHYELGEEADTIDFERAAKISGARFAILKGFASRLD 178

Query: 277 QTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           + L ++M      K  Y E+  P +++      +G    ++ ++FA+K  D         
Sbjct: 179 RALTNFMLDLHTQKHGYTEVLPPFLVNSASLTATGQLPKFKEDLFAIKDWD--------L 230

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDA 391
            L P        +      + ++LP++   F   +R+E         GL+R   F + + 
Sbjct: 231 YLIPTAEVPVTNIHRDETIAEQDLPIKYTAFTPCFRSEAGSHGRDTRGLVRQHQFNKVEL 290

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENI 447
             F T E+  +E   +      + +  G    +VKL T              +W   +  
Sbjct: 291 VKFTTPERSTDELESLLGDAEEVLQLLGLHYRVVKLCTGDLGFSSSKTYDIEVWLPGQQK 350

Query: 448 MKGV 451
            + +
Sbjct: 351 YREI 354


>gi|330503300|ref|YP_004380169.1| seryl-tRNA synthetase [Pseudomonas mendocina NK-01]
 gi|328917586|gb|AEB58417.1| seryl-tRNA synthetase [Pseudomonas mendocina NK-01]
          Length = 426

 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 39/226 (17%), Positives = 80/226 (35%), Gaps = 24/226 (10%)

Query: 242 EKRDHRKLAREMDL--FHIAEDGSGVIFWHRKG--WKIFQTLISYMRRKI--KDDYEEIN 295
           E +DH  L  +     F  A   SG  F   +G   ++ + L  +M      +  YEE  
Sbjct: 135 EIKDHVALGEQHGWLDFETAAKLSGARFALLRGPIARLHRALAQFMINLHTGEHGYEEAY 194

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP ++     Q +G    +  ++F ++      +D     L P        +    +   
Sbjct: 195 TPYLVQAPALQGTGQLPKFEEDLFKIR-----REDQADLYLIPTAEVSLTNIVAGEILDA 249

Query: 356 RELPVRLAEFGSVYRNE--PSGS-LHGLMRVRGFTQDDA-------HVFCTKEQMFNECL 405
           ++LP++       +R+E   SG    G++R   F + +          F   E M     
Sbjct: 250 KQLPLKFVAHTPCFRSEAGASGRDTRGMIRQHQFDKVEMVQIVEPSKSFEALEGMTANAE 309

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
           ++  L+   Y+        +  S     +     +W  +++  + +
Sbjct: 310 RVLQLLELPYRKLALCTGDMGFS---AVKTYDLEVWVPSQDKYREI 352


>gi|171911399|ref|ZP_02926869.1| seryl-tRNA synthetase [Verrucomicrobium spinosum DSM 4136]
          Length = 423

 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 36/234 (15%), Positives = 78/234 (33%), Gaps = 22/234 (9%)

Query: 222 GTAWNTQQELTQYLYF-LEESEKRDHRKLAREMDLFHIA----EDGSGVIFWHRKGWKIF 276
           G +     E+  +      +   +DH  L  +  +          GS  + +   G ++ 
Sbjct: 116 GESAEQNPEVKVWGEKPTYDFAPKDHVALGAQHGMLDFEAGAKITGSAFVVYRGAGARLE 175

Query: 277 QTLISYMRRKIK--DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           + LI+++         Y E+NTP V+       +     +   ++  +  D         
Sbjct: 176 RALINFLLDLHTTSHGYTEVNTPFVVKADALVGTTQLPKFADQVYHCQEDD--------L 227

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDA 391
            L P        +    +     LP++ A +   +R E   +     GL+R+  F + + 
Sbjct: 228 YLVPTAEVPVTNLHREEIVKAESLPIQYAAYTPCFRREAGSAGLGTRGLIRMHQFDKVEL 287

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALW 441
               T E   +E  K+     ++ +  G    +++L T              +W
Sbjct: 288 VKITTPETSMDELEKLTANAEAVLQTLGLHYRIIELCTGDVGFGSTKTYDIEVW 341


>gi|46908933|ref|YP_015322.1| seryl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|47092366|ref|ZP_00230157.1| seryl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
 gi|217966055|ref|YP_002351733.1| seryl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|226225298|ref|YP_002759405.1| seryl-trna synthetase [Listeria monocytogenes Clip81459]
 gi|254824888|ref|ZP_05229889.1| seryl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
 gi|254851948|ref|ZP_05241296.1| seryl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|254930981|ref|ZP_05264340.1| seryl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|254991691|ref|ZP_05273881.1| seryl-tRNA synthetase [Listeria monocytogenes FSL J2-064]
 gi|255520029|ref|ZP_05387266.1| seryl-tRNA synthetase [Listeria monocytogenes FSL J1-175]
 gi|290891927|ref|ZP_06554924.1| seryl-tRNA synthetase [Listeria monocytogenes FSL J2-071]
 gi|300763494|ref|ZP_07073492.1| seryl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
 gi|67461792|sp|Q71W17|SYS_LISMF RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|254783033|sp|B8DD73|SYS_LISMH RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|259511675|sp|C1L082|SYS_LISMC RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|46882206|gb|AAT05499.1| seryl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|47019345|gb|EAL10087.1| seryl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
 gi|217335325|gb|ACK41119.1| seryl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|225877760|emb|CAS06475.1| seryl-trna synthetase [Listeria monocytogenes serotype 4b str. CLIP
           80459]
 gi|258605246|gb|EEW17854.1| seryl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|290558521|gb|EFD92038.1| seryl-tRNA synthetase [Listeria monocytogenes FSL J2-071]
 gi|293582527|gb|EFF94559.1| seryl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|293594128|gb|EFG01889.1| seryl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
 gi|300515771|gb|EFK42820.1| seryl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
 gi|328468223|gb|EGF39229.1| seryl-tRNA synthetase [Listeria monocytogenes 1816]
 gi|328469095|gb|EGF40043.1| seryl-tRNA synthetase [Listeria monocytogenes 220]
 gi|332313177|gb|EGJ26272.1| Seryl-tRNA synthetase [Listeria monocytogenes str. Scott A]
          Length = 427

 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 37/244 (15%), Positives = 87/244 (35%), Gaps = 22/244 (9%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIF 276
           G + +   E+ ++    E   E + H  L  ++D+          GS  +F+ + G ++ 
Sbjct: 115 GESEDDNVEIRKWGEVREFDFEPKAHWDLGTDLDILDFENAAKVTGSRFVFYKKLGARLE 174

Query: 277 QTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           + LI++M     +   YEE+  P ++++     +G    +  + F +        +   +
Sbjct: 175 RALINFMMDLHSNEHGYEEMLPPYMVNRASMTGTGQLPKFEEDAFLI--------EAEDY 226

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDA 391
            L P             +    +LP +   F + +R+E   +     GL+R   F + + 
Sbjct: 227 FLIPTAEVPVTNYHREDILKAEDLPRKYTAFSACFRSEAGSAGRDTRGLIRQHQFNKVEL 286

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENI 447
             F   E  +    K+      + +       ++ + T              +W  + N 
Sbjct: 287 VQFVKPEDSYAALEKLTGNAEEVLRRLELPYRVLSMCTADLGFTAAKKYDLEVWIPSYNS 346

Query: 448 MKGV 451
            + +
Sbjct: 347 YREI 350


>gi|331697361|ref|YP_004333600.1| Histidyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190]
 gi|326952050|gb|AEA25747.1| Histidyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190]
          Length = 438

 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 23/194 (11%), Positives = 63/194 (32%), Gaps = 16/194 (8%)

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
           K  LD +  +  +  N  ++ G   +    FE+ + D +G        Q       R++ 
Sbjct: 256 KRHLDDLGVAYVE--NPRMVRGLDYYTKTTFEF-VHDGLG-------AQSGIGGGGRYDG 305

Query: 509 FYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYA 568
                      P+       G     +    E    +       +      +  +A +  
Sbjct: 306 L---MEVLGGQPLSGVGFGIGVDRTLLACRAEGVAIDDAP---RVDVFCVPLGDAARDRL 359

Query: 569 QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
             +A  L++  + ++  +    +   ++          ++ G+++    ++G++  GS  
Sbjct: 360 VVVAAKLRAAGVRVDIAYGGRGLKGSMKAADRSGARFALVLGERDIEAGTVGVKDLGSGD 419

Query: 629 TQKVSLLDAIPILT 642
              V+L   +  + 
Sbjct: 420 QDAVALDAVVETVA 433


>gi|296158991|ref|ZP_06841819.1| histidyl-tRNA synthetase [Burkholderia sp. Ch1-1]
 gi|295890866|gb|EFG70656.1| histidyl-tRNA synthetase [Burkholderia sp. Ch1-1]
          Length = 446

 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 59/414 (14%), Positives = 120/414 (28%), Gaps = 79/414 (19%)

Query: 289 DDYEEINTPQVLDQHLWQ--QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA 346
             Y+ I TP +    L++       D     M++   A +         ++P N    V 
Sbjct: 42  YGYQNIRTPIIEHTQLFKRGIGEVTDIVEKEMYSFTDALN----GENLTMRPEN-TAAVV 96

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD--DAHVFCTKEQMFNEC 404
                     + P RL   G ++R+E         R R F Q   +A  F   +      
Sbjct: 97  RAAIEHNMLYDGPKRLWYIGPMFRHERPQR----GRYRQFHQVGVEALGFAGPDADA--- 149

Query: 405 LKIHNLIISIYKDFGFE--------------KIMVKLSTRPEKRVGSDALWDDAENIM-- 448
            +I  +   ++ D G                +   ++          D L ++A+  +  
Sbjct: 150 -EIIMMCQRLWDDLGLMGIKLEINSLGLAHERAAHRVELIAHLEKHMDVLDEEAKRRLYT 208

Query: 449 ---------KGVLDTIKNSSQDRINTGVLLGEGAFYGP-------KFEYILKDAIGRDWQ 492
                       +  +  ++   I+         F G           + +   + R   
Sbjct: 209 NPLRVLDTKNPAMQEVAQNAPKLIDFLGEESRAHFDGLQRILKANNIPFTINPRLVRGLD 268

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIH-------RAVFGS-IERFIGIMIENFKG 544
              + V   +  +  A    +   +  P++            +   IER + ++ E    
Sbjct: 269 YYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQLGGKPTAACGWAMGIERILELLKEEQ-- 326

Query: 545 NLPLWLSPIQ----AIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE--TINYK--IR 596
                L P        V     +A E A  IA  L+   L +      +  T ++K  ++
Sbjct: 327 -----LVPEDEGCDVYVVHQGDAAREEAFIIAERLRDTGLDVILHCSADGQTASFKSQMK 381

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRF-------GSTTTQKVSLLDAIPILTK 643
                     ++ G+ E +  ++G++         G      V   D    L  
Sbjct: 382 RADASGAAFAVVLGEDEIANGTVGVKPLRDTNANGGKNEQHNVPAEDLTEFLIN 435


>gi|94263078|ref|ZP_01286897.1| Alanine--tRNA ligase [delta proteobacterium MLMS-1]
 gi|93456621|gb|EAT06729.1| Alanine--tRNA ligase [delta proteobacterium MLMS-1]
          Length = 925

 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 32/166 (19%), Positives = 67/166 (40%), Gaps = 16/166 (9%)

Query: 41  VAINGKVCDLSDPVREGSIE------IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           + +  ++      V EG +E      +   E  R      H+  H++  A++ +  E   
Sbjct: 574 IRVGEQLVAHQAEVVEGRLERGEEVLLAVGEGRRQRVAAHHTATHLLHAALRRVLGEHVK 633

Query: 95  AIGPIIEDG-FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESK 153
             G ++E G   +DF    P  +  + ++E+ +   I  ++      ++ ++A +   + 
Sbjct: 634 QAGSLVEPGRLRFDFTHFSPLGTAAIREVERLVNVEIRANNSLETAMVNRDEALQSGAAA 693

Query: 154 KEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKFF 198
               K          E V +   GE+  +LC G HV +TG++  F 
Sbjct: 694 LFGEKY--------GETVRVVTVGEFSKELCGGTHVGATGEIGLFR 731


>gi|251811371|ref|ZP_04825844.1| seryl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
 gi|293367573|ref|ZP_06614226.1| serine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|251805120|gb|EES57777.1| seryl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
 gi|291318286|gb|EFE58679.1| serine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
          Length = 435

 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 54/371 (14%), Positives = 121/371 (32%), Gaps = 37/371 (9%)

Query: 101 EDGFYYDF-----DKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSH-EKARELFESKK 154
           ++G+  D      + E+  S  EL   + K+ + +       ++ +S  E+ +       
Sbjct: 4   DEGYMLDIRLFRNEPEKVKSKIELRGDDPKVVDQVLELDEQRRELISKTEEMKAKRNKVS 63

Query: 155 EAYKVEILESIPAKENVTLYRQ-GEWFDLCRGPHVRSTGQVK----KFFKLMKVAGAYWR 209
           E    +      A + +   R  G+              +++    +   L+        
Sbjct: 64  EEIAQKKRNKEDADDVIAEMRHLGDEIKDIDNQLNEVDNKIRDILIRIPNLINEDVPQGD 123

Query: 210 GDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWH 269
            D     + + +GT  + + E   +   +EE +  D  + A+      +           
Sbjct: 124 SDEENVEVKK-WGTPRDFEFEPKAHWDLVEELKMADFERAAKVSGARFVYLTK------- 175

Query: 270 RKGWKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
             G  + + L++YM  K   +  Y E+ TPQ+++      +G    +  ++F V      
Sbjct: 176 -DGALLERALMNYMLTKHTTQHGYTEMMTPQLVNADTMFGTGQLPKFEEDLFKV------ 228

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVR 384
             +       P         +   +     LP       + +R+E   +     GL+R+ 
Sbjct: 229 --EKEGLYTIPTAEVPLTNFYRDEIIQPGVLPELFTAQTACFRSEAGSAGRDTRGLIRLH 286

Query: 385 GFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDAL 440
            F + +       E  +N   ++     +I ++ G     V L T              +
Sbjct: 287 QFDKVEMVRIVQPEDSWNALEEMTQNAEAILEELGLPYRRVILCTGDIGFSASKTYDLEV 346

Query: 441 WDDAENIMKGV 451
           W  + N  K +
Sbjct: 347 WLPSYNDYKEI 357


>gi|261405443|ref|YP_003241684.1| alanyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
 gi|261281906|gb|ACX63877.1| alanyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
          Length = 875

 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 32/170 (18%), Positives = 72/170 (42%), Gaps = 10/170 (5%)

Query: 32  RSLAKKAVAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE 91
             L K      ++    +L +     +++       R+  V  H+  H++ +A++ +  E
Sbjct: 520 EGLFKAPHGQHVHFVTVELGELKVGDTVKAQVDSAMRNDIVKNHTATHLLHKALKEVLGE 579

Query: 92  VQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELF 150
                G ++E     +DF      + +ELA IE+++ E + +  P + +  + ++A+ + 
Sbjct: 580 HVNQAGSLVEPQRLRFDFSHFGSITQEELADIERRVNEQVWKSVPVVIERKAIDEAKAMG 639

Query: 151 ESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKFFK 199
                  K          + V + + G++  +LC G HV +T Q+  F  
Sbjct: 640 AMALFGEKY--------GDIVRVVQVGDYSIELCGGCHVDNTSQIGIFKL 681


>gi|154491511|ref|ZP_02031137.1| hypothetical protein PARMER_01122 [Parabacteroides merdae ATCC
           43184]
 gi|154088312|gb|EDN87357.1| hypothetical protein PARMER_01122 [Parabacteroides merdae ATCC
           43184]
          Length = 451

 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 35/92 (38%)

Query: 550 LSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIIC 609
           L   Q +          Y   + + +++  +  E    +  +  ++     KKIP + I 
Sbjct: 360 LKTTQLLFVNFGEKEENYLLPLISKVRAAGIRTELYPESAKMKKQMGYADTKKIPFVAIV 419

Query: 610 GDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           G+ E +E  I ++   +     V+L + I   
Sbjct: 420 GENEINEGKINLKNMLTGEQSLVTLEELIERF 451


>gi|317154684|ref|YP_004122732.1| seryl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
 gi|316944935|gb|ADU63986.1| seryl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
          Length = 425

 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 36/259 (13%), Positives = 83/259 (32%), Gaps = 23/259 (8%)

Query: 208 WRGDSNRPMLSRI-YGTAWNTQQELTQYLYFLEES-EKRDHRKLAREMD--LFHIAEDGS 263
           W           +  G +      +  +        E ++H +L   +    F  A   +
Sbjct: 99  WLMSVPNMPHESVPVGASEADNPVVRSWGEKPVMDFEPKEHWELGTALGGLDFERAAKLA 158

Query: 264 GVIFWHRKGW--KIFQTLISYM--RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMF 319
           G  F    GW  ++ + L  +M   +     Y E+  P ++++     +G    +  ++F
Sbjct: 159 GSRFALSFGWCARLERALAQFMLDTQTTLHGYTEVIPPYIVNRRTMTGTGQLPKFEEDLF 218

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGS 376
            ++  D  +         P        ++   +     LPV+       +R+E       
Sbjct: 219 KLEGVDSFLI--------PTAEVPLTNIYAGEVIDEAALPVKFCAHTPCFRSEAGSYGKD 270

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR-- 434
             GL+R+  F + +   F   +  +     +      I +  G    +++L T       
Sbjct: 271 TKGLIRLHQFHKVEMVNFAHPDTSYEALEAMTAAAEKILQLLGIHYRVIELCTGDMGFGA 330

Query: 435 --VGSDALWDDAENIMKGV 451
                  +W   +N  + +
Sbjct: 331 TKTYDIEVWLPGQNQYREI 349


>gi|226949919|ref|YP_002805010.1| alanine--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
 gi|226843074|gb|ACO85740.1| alanine--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
          Length = 879

 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 38/172 (22%), Positives = 75/172 (43%), Gaps = 23/172 (13%)

Query: 35  AKKAVAVAI-------NGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQS 87
            KK ++  I       +GKV        E  + +   E+ R+     H+  HI+  A+  
Sbjct: 525 CKKNISGKILHFVKILDGKVA------LEDQVILKVNEERRNNIRKNHTATHILHAALIK 578

Query: 88  IWPEVQVAIGPIIEDG-FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKA 146
           +  +     G  ++D    +DF   +  S DEL ++EK + + I + +    + ++ E+A
Sbjct: 579 VVGDHVQQSGSYVDDERLRFDFSHFEAVSEDELKEVEKIVNKEIMKANAVNTKVMNIEEA 638

Query: 147 RELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
           ++             L     K++V +   G++  +LC G HV ++GQ+  F
Sbjct: 639 KQ--------QGAIALFDNKYKDDVRVVSVGDFSKELCGGTHVSNSGQIGMF 682


>gi|261364444|ref|ZP_05977327.1| alanine--tRNA ligase [Neisseria mucosa ATCC 25996]
 gi|288567357|gb|EFC88917.1| alanine--tRNA ligase [Neisseria mucosa ATCC 25996]
          Length = 873

 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 39/165 (23%), Positives = 68/165 (41%), Gaps = 14/165 (8%)

Query: 36  KKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           K AV     G V      V +  S EI    D R+  +  HS  H+M +A++ +      
Sbjct: 525 KAAVHGQF-GSVVSGRLKVGDAVSAEI--DNDIRNSIMRNHSVTHLMHKALRDVLGTHVE 581

Query: 95  AIGPIIEDGF-YYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESK 153
             G +       +D    Q  S++E+A++E+++   I  + P   + +S E A++     
Sbjct: 582 QKGSLQNAELTRFDISHPQGISAEEIAEVERRVNAAIIANVPVKVETMSIEDAQKSGAVM 641

Query: 154 KEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
               K          + V +   G++  +LC G HV  TG +  F
Sbjct: 642 LFGEKY--------GDFVRVITMGDYSIELCGGTHVARTGDIGFF 678


>gi|224498407|ref|ZP_03666756.1| seryl-tRNA synthetase [Listeria monocytogenes Finland 1988]
          Length = 427

 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 36/244 (14%), Positives = 86/244 (35%), Gaps = 22/244 (9%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIF 276
           G + +   E+ ++        E + H  L  ++D+          GS  +F+ + G ++ 
Sbjct: 115 GESEDDNVEIRKWGEVRAFDFEPKAHWDLGTDLDILDFENAAKVTGSRFVFYKKLGARLE 174

Query: 277 QTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           + LI++M     +   YEE+  P ++++     +G    +  + F +        +   +
Sbjct: 175 RALINFMMDLHSNEHGYEEMLPPYMVNRASMTGTGQLPKFEEDAFLI--------EAEDY 226

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDA 391
            L P             +    +LP +   F + +R+E   +     GL+R   F + + 
Sbjct: 227 FLIPTAEVPVTNYHREDILKAEDLPRKYTAFSACFRSEAGSAGRDTRGLIRQHQFNKVEL 286

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENI 447
             F   E  +    K+      + +       ++ + T              +W  + N 
Sbjct: 287 VQFVKPEDSYAALEKLTGNAEEVLRRLELPYRVLSMCTADLGFTAAKKYDLEVWIPSYNS 346

Query: 448 MKGV 451
            + +
Sbjct: 347 YREI 350


>gi|212703805|ref|ZP_03311933.1| hypothetical protein DESPIG_01853 [Desulfovibrio piger ATCC 29098]
 gi|212672773|gb|EEB33256.1| hypothetical protein DESPIG_01853 [Desulfovibrio piger ATCC 29098]
          Length = 425

 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 37/221 (16%), Positives = 77/221 (34%), Gaps = 19/221 (8%)

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIF--QTLISYMRRKI--KDDYEEINTP 297
           E R H +L      F  A   +G  F    GW     + L+++   +    +DY E+  P
Sbjct: 135 EIRQHWELGGAALDFERATRLAGSRFALYMGWAARLDRALVNFFLDQHVKHEDYIEVCPP 194

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++++     +G    +  ++F +   D        + L P        +    +    +
Sbjct: 195 FMVNRATMTGTGQLPKFEEDLFKMPAWD--------YYLIPTAEVPLTNIHAGEVLDEAD 246

Query: 358 LPVRLAEFGSVYRNE---PSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           LP         +R+E         GL+R+  FT+ +   F   +  FN+   +     ++
Sbjct: 247 LPRAYCAATPCFRSEAGAAGKDTRGLIRLHQFTKVEMVRFAHPDDSFNQLEIMVGHARTL 306

Query: 415 YKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
            +       ++ L T              +W  A+N  + +
Sbjct: 307 LEKLELPYRVITLCTGDMGFGSAKTYDLEVWLPAQNTYREI 347


>gi|198432935|ref|XP_002127248.1| PREDICTED: similar to Seryl-aminoacyl-tRNA synthetase [Ciona
           intestinalis]
          Length = 506

 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 59/159 (37%), Gaps = 7/159 (4%)

Query: 275 IFQTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           + Q LI++ ++R   + Y  + TP  + + + Q+      +   ++ V        +   
Sbjct: 203 LEQALINFALQRLANNGYVPLYTPYFMRKEVMQEVAQLSQFDDELYKVVGKSSEKAEDGG 262

Query: 334 FALKP---MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFT 387
              K     +     A+         +LP++ A F + +R E         G+ RV  F 
Sbjct: 263 TDEKYLIATSEQPIAALHRDEWLEPEKLPIKYAGFSTCFRQEVGSHGRDTRGIFRVHQFE 322

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK 426
           + +  V+ + E  +    ++       YKD G    +V 
Sbjct: 323 KVEQFVYSSPETSWQHFDEMIATAEGFYKDLGIPYHIVC 361


>gi|313623670|gb|EFR93824.1| histidyl-tRNA synthetase [Listeria innocua FSL J1-023]
          Length = 425

 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 68/431 (15%), Positives = 135/431 (31%), Gaps = 63/431 (14%)

Query: 265 VIFWHRKGWK--------IFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
           +     +G +         +  L S  ++  ++  YEEI TP        +         
Sbjct: 1   MDLQLPRGTRDILPEEVSKWHFLESAFKKVCENYQYEEIRTPVF---EHTELFERGVGDS 57

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF-NHGLKSYRELPVRLAEFGSVYRNEPS 374
            ++ + +      K  R+  L+P      V  F  H L      P+++     ++R E  
Sbjct: 58  TDIVSKEMYTFEDKGGRSLTLRPEGTASVVRAFVEHKLYGEVSQPIKMYYNEPMFRYERP 117

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM---------- 424
                  R R FTQ       + +   +   ++ +L +  ++  G   I           
Sbjct: 118 ----QGGRQRQFTQMGIEALGSDDPSIDV--EVISLAMEFFRKIGLTNIKLVINSLGDKE 171

Query: 425 ----VKLSTRPEKRVGSDALWDDAENIMK------GVLDTIKN------SSQDRINTGVL 468
                + +         D     AE  ++       +LD  K+       S   I   + 
Sbjct: 172 SRLKHREALVAHFEPHIDEF--CAECQVRLHKNPLRILDCKKDHDNPLIQSAPSILDFLN 229

Query: 469 LGEGAF------YGPKFEYILKD----AIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC 518
               A+      Y    E   +       G D+   T     ++   F A        + 
Sbjct: 230 EESVAYFENVKKYLTALEIPFEIDPTMVRGLDYYNHTTFEIMSVEEGFGAKTTLCGGGRY 289

Query: 519 HPVMIHRAVFGSIERFIGIMIE------NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIA 572
           H ++       +     GI +E                 P++  V T    A   A  + 
Sbjct: 290 HGLVKEFGGPDTPGIGFGIGVERILLALEKAEINIPETKPLEVYVITAQPEAELKAVTLV 349

Query: 573 NLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
           N L+ + +S E D+    +  ++++ + KK    +I G++E    +  ++   +   + V
Sbjct: 350 NKLRQNGISAEKDYLKRKLKAQLKDANRKKAIYTVILGEEELQTGNYQLKNMETGEQEAV 409

Query: 633 SLLDAIPILTK 643
           S    I  LT 
Sbjct: 410 SETTIIEKLTN 420


>gi|284161335|ref|YP_003399958.1| glycyl-tRNA synthetase [Archaeoglobus profundus DSM 5631]
 gi|284011332|gb|ADB57285.1| glycyl-tRNA synthetase [Archaeoglobus profundus DSM 5631]
          Length = 567

 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 22/103 (21%), Positives = 41/103 (39%), Gaps = 4/103 (3%)

Query: 549 WLSPIQAIVTTI--TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPII 606
           W++PI   V  +         A+EI  +L+ +    E D    +I  + R       P  
Sbjct: 455 WVAPIPVAVLPLLSREPFTSKAKEIVQMLRENGFYTEYDDSG-SIGRRYRRFDEIGTPFC 513

Query: 607 IICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPPD 649
           I    +   + ++ IR   +T   +V + + +P +  E L  D
Sbjct: 514 ITIDHQTFEDETVTIRDRDTTKQVRVKISE-LPKVLNELLTSD 555



 Score = 45.9 bits (107), Expect = 0.024,   Method: Composition-based stats.
 Identities = 65/403 (16%), Positives = 119/403 (29%), Gaps = 94/403 (23%)

Query: 256 FHIAEDGSGVIFWHRKGWKIFQTLISYMRRK--IKDDYEEINTPQVLDQHLWQQSGHWDS 313
           F I    +G + +   G  + + + +  R+   +++   EI+TP V  + ++  SGH   
Sbjct: 18  FEIYGGMAGFVDYGPLGNALRRKIENIWRKHFVVRERAVEIDTPTVCVEEVFVASGHVSC 77

Query: 314 Y----------------------------RANMFAVKCADDT------------------ 327
           +                              N+  VK   +T                  
Sbjct: 78  FTDVAIECESCGRVFRADHYIKDVLGIEIEPNIETVKEIIETYDLKCSCGGKFKEPFLFN 137

Query: 328 --------IKDLRTFALKPMNCPGHVAVFNHGLKSYRE-LPVRLAEFGSVYRNEPSGSLH 378
                       +   L+P    G    F   L+ +R  LP  +A+ G  YRNE S    
Sbjct: 138 LMFSTTIGPGKGKKGYLRPETAQGIFIDFRRLLEYFRHKLPFGVAQIGRAYRNEISPR-Q 196

Query: 379 GLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD 438
           G++R+R F Q +   F    +  +     +  ++    D       V L    EK +   
Sbjct: 197 GVIRLREFNQAELEYFVNPREKRHPNFARYANVVVKLLDKNDVLHEVTLKEAVEKGIVCH 256

Query: 439 ALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP-KFEYILKDAIGRDWQCGTIQ 497
            L        +  L  +               E A Y    ++  +  A G   +   I 
Sbjct: 257 ELMAYFIGKTREFLLEVGIDEAKLRFRQHKDDERAHYAIDCWDAEVLTAYG-WIEIVGIA 315

Query: 498 VDFNLPSRFNAFYVNSHS----EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI 553
              +   + +  +         +   P+ + R            +I N K   P+     
Sbjct: 316 DRTDYDLKKHMEHSGEDLRVFVQFEKPIKVKRKK----------VIPNMKKLGPV----- 360

Query: 554 QAIVTTITSSAVEYAQEIANLLKSHHLSIET-----DFRNETI 591
                       + A+EIA  L+   +  +      D   E I
Sbjct: 361 ----------YRQKAKEIAKKLEEIEVDGDVESITIDLDGEKI 393


>gi|239637575|ref|ZP_04678547.1| alanyl-tRNA synthetase [Staphylococcus warneri L37603]
 gi|239596793|gb|EEQ79318.1| alanyl-tRNA synthetase [Staphylococcus warneri L37603]
          Length = 876

 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 79/197 (40%), Gaps = 26/197 (13%)

Query: 13  SIKNFPVHATGSDVAES-ISRSLAKKAV-AVAIN-GKVCDLSDPVREGSIEIITPEDPRS 69
           S  +F +  T  +V ++   ++L K  V    +N G   D S             +D R 
Sbjct: 513 SNDHFEIAVT--EVTKAPNGQNLHKGTVQFGQVNKGSEVDAS-----------VNKDERR 559

Query: 70  LAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQE 128
                HS  H++  A++ +  E     G ++E +   +DF      + DE+ Q+E+++ E
Sbjct: 560 SIQKNHSATHLLHAALKEVLGEHVNQAGSLVEPNRLRFDFSHFGQMTQDEINQVERRVNE 619

Query: 129 IIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPH 187
            I R      Q ++ ++A+ +        K          + V +     +  +LC G H
Sbjct: 620 EIWRGIDVRIQEMNIDEAKAMGAMALFGEKY--------GDVVRVVNMAPFSIELCGGIH 671

Query: 188 VRSTGQVKKFFKLMKVA 204
           V +T ++  F  + +  
Sbjct: 672 VENTAEIGLFKIVSESG 688


>gi|228987640|ref|ZP_04147754.1| Alanyl-tRNA synthetase [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
 gi|228772100|gb|EEM20552.1| Alanyl-tRNA synthetase [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
          Length = 880

 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 66/161 (40%), Gaps = 15/161 (9%)

Query: 44  NGK-----VCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP 98
           NG+     V +     ++ +++ I     RS  V  H+  H++ +A++ +        G 
Sbjct: 531 NGQNLHKVVVEEGTLTKDAAVKAIIDTKNRSSVVKNHTATHLLHQALKDVLGTHVNQAGS 590

Query: 99  -IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAY 157
            +  +   +DF       +DEL +IE+ + E I           + E+A+E+        
Sbjct: 591 LVTSERLRFDFSHFGQVQTDELEKIERIVNEKIWESIDVEISQKAIEEAKEMGAMALFGE 650

Query: 158 KVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
           K          + V + + G++  +LC G HV +T  +  F
Sbjct: 651 KY--------GDVVRVVQVGDYSLELCGGCHVDNTASIGIF 683


>gi|332188256|ref|ZP_08389984.1| histidyl-tRNA synthetase [Sphingomonas sp. S17]
 gi|332011755|gb|EGI53832.1| histidyl-tRNA synthetase [Sphingomonas sp. S17]
          Length = 440

 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 55/398 (13%), Positives = 121/398 (30%), Gaps = 50/398 (12%)

Query: 273 WKIFQTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
            ++ +T            ++ ++ P   D  ++ +S        ++ + +      +   
Sbjct: 25  AEVLRTFEQV---HELYAFQRLDLPVFEDTQVFARSIGET---TDVVSKEMYTFPDRGGD 78

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
              L+P    G    +       +  P++L   G V+R E         R R F Q DA 
Sbjct: 79  MLTLRPEFTAGIARAYLTEGW-QQYAPLKLVTSGPVFRYERPQK----GRYRQFHQIDAE 133

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA-ENIMKGV 451
           +    E   +   ++  +   +  + G  + +             DA W DA     +  
Sbjct: 134 ILGAAEPAADV--ELLVMADQLLHELGIAEGVTLQLNTLGDAETRDA-WRDALVAHFEAH 190

Query: 452 LDTIKNSSQDRINTGVL---------LGEGAFYGPKFEYILKDAIGRDWQCGTIQVDF-- 500
            D +   S  R+    L             A   P  +  L       ++  T  +D   
Sbjct: 191 RDQLSEDSLVRLEKNPLRILDSKDPRDRPIADAAPDIDAYLTPEARAFFEAVTAGLDAAG 250

Query: 501 NLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG-----IMIENFKGNLPL---WLS- 551
              +R           +           G+    +       +IE+  G       W + 
Sbjct: 251 VAWTRNARLVRGLDYYRHTAFEFVTDRLGAQGTVLAGGRYDGLIESLGGPATPGVGWAAG 310

Query: 552 -------------PI-QAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
                        P+  A+V  + ++A   A  +   L+   ++ +  FR   +  ++ +
Sbjct: 311 VERLAMLLDEPAKPVIDAVVVPMGAAAELRATGLVAELRRAGVATDMAFRGN-MKRRMAK 369

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
            + +     +I GD E +   + ++   +     V L 
Sbjct: 370 ANDQGASYALILGDDELANGQVQVKALATGEQATVPLE 407


>gi|281341624|gb|EFB17208.1| hypothetical protein PANDA_007865 [Ailuropoda melanoleuca]
          Length = 536

 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 57/165 (34%), Gaps = 11/165 (6%)

Query: 271 KGWKIF--QTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
           KG  +F  Q LI Y +R      Y  I TP  + + + Q+      +   ++ V      
Sbjct: 196 KGVLVFLEQALIQYALRTLGSRGYTPIYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGSE 255

Query: 328 IKDLRTFALKP---MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLM 381
             D  ++  K     +     A+         +LP++ A   + +R E         G+ 
Sbjct: 256 KSDDNSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGRDTRGIF 315

Query: 382 RVRGFTQDDAHVFCTKEQ--MFNECLKIHNLIISIYKDFGFEKIM 424
           RV  F + +  V+ +      +    ++       Y+  G    +
Sbjct: 316 RVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEDFYQSLGIPYHI 360


>gi|225010000|ref|ZP_03700472.1| alanyl-tRNA synthetase [Flavobacteria bacterium MS024-3C]
 gi|225005479|gb|EEG43429.1| alanyl-tRNA synthetase [Flavobacteria bacterium MS024-3C]
          Length = 879

 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 32/158 (20%), Positives = 62/158 (39%), Gaps = 11/158 (6%)

Query: 44  NGKVCDLSDPVREG---SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII 100
           N ++   S  + +    S +    +  R      H+  H++ +A+++I        G  +
Sbjct: 536 NNEIIHFSSTLPKDPRVSFKASVDKKQRDRTSKNHTATHLLHQALRAILGTHVAQKGSAV 595

Query: 101 EDGF-YYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKV 159
              +  +DF      +S++L +IE  +   I    P        E+ R     + +A   
Sbjct: 596 HSKYLRFDFSHFSKVTSEQLKEIEDYVNARIDGHIPL-------EEHRNRPLVQAQADGA 648

Query: 160 EILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
             L      + V   R G   +LC G HV++TG + +F
Sbjct: 649 MALFGEKYGDTVRSIRFGHSIELCGGTHVKNTGDIWQF 686


>gi|73959369|ref|XP_852762.1| PREDICTED: similar to seryl-tRNA synthetase isoform 2 [Canis
           familiaris]
          Length = 536

 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 57/165 (34%), Gaps = 11/165 (6%)

Query: 271 KGWKIF--QTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
           KG  +F  Q LI Y +R      Y  I TP  + + + Q+      +   ++ V      
Sbjct: 196 KGVLVFLEQALIQYALRTLGSRGYTPIYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGSE 255

Query: 328 IKDLRTFALKP---MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLM 381
             D  ++  K     +     A+         +LP++ A   + +R E         G+ 
Sbjct: 256 KSDDNSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGRDTRGIF 315

Query: 382 RVRGFTQDDAHVFCTKEQ--MFNECLKIHNLIISIYKDFGFEKIM 424
           RV  F + +  V+ +      +    ++       Y+  G    +
Sbjct: 316 RVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEDFYQSLGIPYHI 360


>gi|319757428|gb|ADV69370.1| histidyl-tRNA synthetase [Streptococcus suis JS14]
          Length = 427

 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 63/421 (14%), Positives = 133/421 (31%), Gaps = 70/421 (16%)

Query: 276 FQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           +Q + ++ R    + +Y EI TP       ++          ++   +  D   K  R  
Sbjct: 20  WQYVENFTRSIFKQYNYAEIRTPIF---EHYEVISRSVGDTTDIVTKEMYDFYDKGERHI 76

Query: 335 ALKPMNCPGHVAVFNHGLKS-----YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
            L+P    G   V    +++       + P +    G ++R E   +     R+R F Q 
Sbjct: 77  TLRP---EGTAPVVRSYVENKLFAPEVQKPAKFYYMGPMFRYERPQA----GRLRQFHQI 129

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGS-------DALWD 442
               F +        ++   +    +++ G + I + L++       +       D L  
Sbjct: 130 GVECFGSNNPA--TDVETIAMAYHFFEELGIKDIRLHLNSLGNPESRAAYRQALIDYLTP 187

Query: 443 DAENIMKG-----------VLDTIKNSSQDR-------INTGVLLGEGAFYGPKFEYILK 484
             E + K            VLD+ +   +         ++         F   K    + 
Sbjct: 188 LKEQLSKDSQRRLEENPLRVLDSKEKEDKVAVENAPSILDYLDEESTAHFEAVK---TML 244

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSH------------------SEKCHPVMIHRA 526
           D++G  +   T  V          F   +                   +    P      
Sbjct: 245 DSLGIAYVIDTNMVRGLDYYNHTIFEFMTEVGGNDLTICAGGRYDGLVTYFGGPETPAFG 304

Query: 527 VFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF 586
               IER I +++E    +LPL  + +   +  +   A   A E+  +++      E D+
Sbjct: 305 FGMGIERLI-LVLEKQGIDLPL-DTQLDVYIAVLGQEANGGALELVQVIRKQGFRAERDY 362

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL----DAIPILT 642
            +  +  + +   +     II  G  E     + ++   + +  + SL     D   IL 
Sbjct: 363 LDRKLKAQFKSADVFGAKAIITLGGSEIESGQVVVKNNQTRSQVETSLEALKTDFASILE 422

Query: 643 K 643
           +
Sbjct: 423 E 423


>gi|308186248|ref|YP_003930379.1| Seryl-tRNA synthetase [Pantoea vagans C9-1]
 gi|308056758|gb|ADO08930.1| Seryl-tRNA synthetase [Pantoea vagans C9-1]
          Length = 430

 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 64/188 (34%), Gaps = 10/188 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M     +   Y E   P +++      +G    +  ++F  +  ++   D
Sbjct: 170 ARLHRALSQFMIDLHTEQHGYLETYVPYLVNHETLYGTGQLPKFGEDLFHTRPLEE-QSD 228

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
              +AL P        +    +     LPV+L      +R+E         GL+R+  F 
Sbjct: 229 SSNYALIPTAEVPLTNLMRDEIVEEDSLPVKLTAHTPCFRSEAGSYGRDTRGLIRMHQFD 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +     T EQ  +   ++      + +        V L T              +W  
Sbjct: 289 KVEMVQIVTPEQSMDALEELTGHAEKVLQLLNLPYRKVLLCTGDMGFGSTKTYDLEVWLP 348

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 349 AQNTYREI 356


>gi|297279471|ref|XP_001089358.2| PREDICTED: seryl-tRNA synthetase, cytoplasmic [Macaca mulatta]
          Length = 459

 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 57/165 (34%), Gaps = 11/165 (6%)

Query: 271 KGWKIF--QTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
           KG  +F  Q LI Y +R      Y  I TP  + + + Q+      +   ++ V      
Sbjct: 197 KGVLVFLEQALIQYALRTLGSRGYTPIYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGSE 256

Query: 328 IKDLRTFALKP---MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLM 381
             D  ++  K     +     A+         +LP++ A   + +R E         G+ 
Sbjct: 257 KSDDNSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGRDTRGIF 316

Query: 382 RVRGFTQDDAHVFCTKEQ--MFNECLKIHNLIISIYKDFGFEKIM 424
           RV  F + +  V+ +      +    ++       Y+  G    +
Sbjct: 317 RVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHI 361


>gi|146298609|ref|YP_001193200.1| seryl-tRNA synthetase [Flavobacterium johnsoniae UW101]
 gi|146153027|gb|ABQ03881.1| seryl-tRNA synthetase [Flavobacterium johnsoniae UW101]
          Length = 423

 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 29/203 (14%), Positives = 68/203 (33%), Gaps = 16/203 (7%)

Query: 240 ESEKRDHRKLAREMDLFHIA----EDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEI 294
               + H +L ++ D+          G+G   +  KG ++ + LI+Y + +     Y E+
Sbjct: 137 HEGAQPHWELVKKYDIIDFELGVKITGAGFPVYKGKGARLQRALINYFLDKNTAAGYNEV 196

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
             P ++++           Y       K        +    L P        +F   + +
Sbjct: 197 QVPHLVNE--------ASGYGTGQLPDKEGQMYHAGVDDLYLIPTAEVPVTNLFRDVILN 248

Query: 355 YRELPVRLAEFGSVYRNEPSG---SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI 411
             ELP+    +   +R E       + GL R+  F + +       +  +     +   +
Sbjct: 249 ESELPILHTAYTPCFRREAGSYGAHVRGLNRLHQFDKVEIVRVEHPDNSYAALDGMVEHV 308

Query: 412 ISIYKDFGFEKIMVKLSTRPEKR 434
            +I ++      +++L       
Sbjct: 309 KNILQELKLPYRILRLCGGDMGF 331


>gi|148545036|ref|YP_001272406.1| histidyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
 gi|184154370|ref|YP_001842711.1| histidyl-tRNA synthase [Lactobacillus reuteri JCM 1112]
 gi|227364184|ref|ZP_03848281.1| histidyl-tRNA synthetase [Lactobacillus reuteri MM2-3]
 gi|325683387|ref|ZP_08162903.1| histidine--tRNA ligase [Lactobacillus reuteri MM4-1A]
 gi|148532070|gb|ABQ84069.1| histidyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
 gi|183225714|dbj|BAG26231.1| histidyl-tRNA synthase [Lactobacillus reuteri JCM 1112]
 gi|227070823|gb|EEI09149.1| histidyl-tRNA synthetase [Lactobacillus reuteri MM2-3]
 gi|324977737|gb|EGC14688.1| histidine--tRNA ligase [Lactobacillus reuteri MM4-1A]
          Length = 433

 Score = 61.3 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 73/416 (17%), Positives = 140/416 (33%), Gaps = 54/416 (12%)

Query: 269 HRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
                +++Q + +  R    +  Y EI TP       +          +++   +  D  
Sbjct: 18  LPGESELWQKVENIARNTFAEFGYSEIRTPMF---EDYNVFARNVGDTSDIVEKQMYDFH 74

Query: 328 IKDLRTFALKPMNCPGHVAVF--NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRG 385
            K  R  AL+P    G V  +  N         P ++   G ++R E   S     R R 
Sbjct: 75  DKGERHVALRPEGTAGVVRAYVQNKLFGPEYPKPYKVYYMGPMFRYERPES----GRQRQ 130

Query: 386 FTQ--DDAHVFCTKEQMFNECLKIHNLIIS--------IYKDFGFEKIMVKLSTRPEKRV 435
           FTQ   +A    + +      L+                    G ++            +
Sbjct: 131 FTQIGCEALNSESPQIDAEVILEALMFFKRLGITELRVAINTLGDKETRDNYRQALIDYL 190

Query: 436 --GSDALWDDAENIMKG----VLDTIKNSSQDRI-NTGVLLGEGAFYGPK---------- 478
               D L DD++  +      VLD+   + +  + N   +L   + Y  K          
Sbjct: 191 KPHYDELSDDSKERLYKNPLRVLDSKDETDKKIVANAPSILDSLSGYSAKYFDSVKKILD 250

Query: 479 ---FEYILKDAI--GRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIER 533
               +Y++ + +  G D+   TI    +    F   Y        +  +I + + G  E 
Sbjct: 251 KFNVDYVVDNEMVRGLDYYTHTIFEIMSNSPVFGGGYTTICGGGRYNGLISQ-IGGPDEG 309

Query: 534 FIGIMI-------ENFKGNLPLWLSP-IQAIVTTITSSAVEYAQEIANLLKSHHLSIETD 585
            IG  I          + N      P +     T+   A  +A E+   L++  + ++ D
Sbjct: 310 GIGYGIGVERLLLLLREENKSFIPQPGLDLFFVTVGEKADNFAFELMEPLRTMGIKVDKD 369

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR---RFGSTTTQKVSLLDAI 638
           ++   +  +I+E S +      + GDKE   + I +       S   +KVS+ + +
Sbjct: 370 YQGLKVGTQIKEASRRNSRYFAVIGDKEILSKEIELNFTESDSSEEGKKVSIDELL 425


>gi|282890190|ref|ZP_06298720.1| hypothetical protein pah_c014o045 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281499847|gb|EFB42136.1| hypothetical protein pah_c014o045 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 876

 Score = 61.3 bits (147), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 57/146 (39%), Gaps = 14/146 (9%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFS 115
            S+E       R      H+  H++  A+  +  E     G ++E G   +DF   +P +
Sbjct: 548 DSVEASVDAPRRQKIENNHTATHLLHWALHHVLGEHVKQAGSVVEPGRLRFDFSHHKPLT 607

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARE---LFESKKEAYKVEILESIPAKENVT 172
             EL +IE  + + I  + P     +++E+A++   + +   E Y             V 
Sbjct: 608 KQELNEIENLVNQRIRLNLPVKTYEIAYEEAQKSTDIKQFFGEKY----------GAKVR 657

Query: 173 LYRQGEWFDLCRGPHVRSTGQVKKFF 198
           +       +LC G H  + G +  F 
Sbjct: 658 VVDAEFSKELCGGTHTSALGNIGLFR 683


>gi|224532246|ref|ZP_03672878.1| alanyl-tRNA synthetase [Borrelia valaisiana VS116]
 gi|224511711|gb|EEF82117.1| alanyl-tRNA synthetase [Borrelia valaisiana VS116]
          Length = 594

 Score = 61.3 bits (147), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 54/130 (41%), Gaps = 10/130 (7%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           H+  H++ +A+Q +  +     G  I  +   +DF   +  + DE+ ++E  +   I   
Sbjct: 456 HTATHLLHKALQLVLGDHVRQKGSNITAERLRFDFVHSEKMTDDEIKKVEDIVNLQIKNS 515

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTG 192
               K  +   +ARE         K + L        V++Y    +  ++C GPHV +T 
Sbjct: 516 LSVKKSIMELSEARERGAIALFGEKYDNL--------VSVYEIDGFSLEVCGGPHVENTN 567

Query: 193 QVKKFFKLMK 202
           ++  F    +
Sbjct: 568 ELGTFKIQKE 577


>gi|329926749|ref|ZP_08281157.1| alanine--tRNA ligase [Paenibacillus sp. HGF5]
 gi|328938949|gb|EGG35317.1| alanine--tRNA ligase [Paenibacillus sp. HGF5]
          Length = 875

 Score = 61.0 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 72/170 (42%), Gaps = 10/170 (5%)

Query: 32  RSLAKKAVAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE 91
             L K      ++    +L +     +++       R+  V  H+  H++ +A++ +  +
Sbjct: 520 EGLFKAPHGQHVHFVTVELGELKVGDTVKAQVDTAMRNDIVKNHTATHLLHKALKEVLGD 579

Query: 92  VQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELF 150
                G ++E     +DF      + +ELA IE+++ E + +  P + +  + ++A+ + 
Sbjct: 580 HVNQAGSLVEPQRLRFDFSHFGSITQEELADIERRVNEQVWKSVPVVIERKAIDEAKAMG 639

Query: 151 ESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKFFK 199
                  K          + V + + G++  +LC G HV +T Q+  F  
Sbjct: 640 AMALFGEKY--------GDIVRVVQVGDYSIELCGGCHVDNTSQIGIFKL 681


>gi|269214760|ref|ZP_05987102.2| alanine--tRNA ligase [Neisseria lactamica ATCC 23970]
 gi|269209090|gb|EEZ75545.1| alanine--tRNA ligase [Neisseria lactamica ATCC 23970]
          Length = 885

 Score = 61.0 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 62/143 (43%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFS 115
            S+     ++ R+  +  HS  H+M +A++ +  E     G  +  +   +D    Q  +
Sbjct: 555 DSVTAKVDDEIRNANMRNHSATHLMHKALRDVLGEHVEQKGSLVTAESTRFDISHPQAVT 614

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           ++E+A++E+++ E +  +       +S E A++         K          + V + +
Sbjct: 615 AEEIAEVERRVNEAVLANVAVNAAIMSMEDAQKTGAMMLFGEKY--------GDEVRVLQ 666

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G +  +LC G HV  TG +  F
Sbjct: 667 MGGFSTELCGGTHVSRTGDIGLF 689


>gi|224542880|ref|ZP_03683419.1| hypothetical protein CATMIT_02074 [Catenibacterium mitsuokai DSM
           15897]
 gi|224524210|gb|EEF93315.1| hypothetical protein CATMIT_02074 [Catenibacterium mitsuokai DSM
           15897]
          Length = 868

 Score = 61.0 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 26/149 (17%), Positives = 59/149 (39%), Gaps = 8/149 (5%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFS 115
            ++E+      R+L    H+  H++  A++++        G  + E+   +DF      +
Sbjct: 543 DTVELTVDTARRTLIENNHTATHLLDAALKNVLGSHVGQAGSYLDENRLRFDFTHPSKMT 602

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            +EL  +E  + E I +      + +  E+A     +     K   +  +    + +   
Sbjct: 603 KEELTAVEDMVNEYIFKGVDVDVKEMPKEEAISAGATALFDEKYGDVVRVVRVGDFS--- 659

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLMKVA 204
                +LC G HV +T ++  F   M+ +
Sbjct: 660 ----VELCGGTHVSNTAKIGLFKIEMETS 684


>gi|83588895|ref|YP_428904.1| seryl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
 gi|123525300|sp|Q2RMH8|SYS_MOOTA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|83571809|gb|ABC18361.1| seryl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
          Length = 427

 Score = 61.0 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 49/342 (14%), Positives = 104/342 (30%), Gaps = 42/342 (12%)

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           L ++E          +   +   S + A EL  S +E    E ++ +   E V    +  
Sbjct: 41  LVEVEGLKNRRNQVSAEVARLKKSGQDATELIASMREVG--ERIKEL--DEKVRAVEEEL 96

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFL 238
             ++ + P++                  +W             G     + E   +    
Sbjct: 97  RQEMLKLPNIPHASVPDGLSDADNKPVRHW-------------GELPRFKFEPRPHWEIA 143

Query: 239 EESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI--KDDYEEINT 296
           E     D  +  +      +        F+   G ++ + LI++M      K  Y EI  
Sbjct: 144 ENLGIVDFERGGKVAGARFV--------FYRGAGARLERALINFMLDLHTIKHGYTEIFP 195

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +++      +G    +  +MF V        +   + L P        ++   +    
Sbjct: 196 PYMVNSASMLGTGQLPKFAEDMFHV--------EGTDYYLIPTAEVPVTNLYRGEILPGE 247

Query: 357 ELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           +LP+    + + +R E   +     GL+R   F + +   F   E  + E  K+      
Sbjct: 248 KLPIYHVAYSACFRAEAGAAGRDTRGLIRQHQFNKVELVKFTRPEDSYEELEKLTRDAEE 307

Query: 414 IYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
           + +  G    +V L                +W       + +
Sbjct: 308 VLQLLGLPYRVVALCAGDLGFSAAKTYDLEVWMPGTACYREI 349


>gi|169832457|ref|YP_001695482.1| histidyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
 gi|229558747|sp|B1I9T7|SYH_STRPI RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|168994959|gb|ACA35571.1| histidyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
          Length = 429

 Score = 61.0 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 60/404 (14%), Positives = 126/404 (31%), Gaps = 56/404 (13%)

Query: 276 FQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           +Q +  + R   K  +Y E+ TP       ++          ++   +  D   K  R  
Sbjct: 20  WQYVEGFAREIFKRYNYAEVRTPIF---EHYEVISRSVGDTTDIVTKEMYDFYDKGDRHI 76

Query: 335 ALKPMNCPGHVAVFNHGLKS-----YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
            L+P    G   V    +++       + P +    G ++R E   +     R+R F Q 
Sbjct: 77  TLRP---EGTAPVVRSYVENKLFAPEVQKPSKFYYMGPMFRYERPQA----GRLRQFHQI 129

Query: 390 DAHVFCTKEQM-FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWD------ 442
               F +       E + +    +      G +  +  L     +     AL D      
Sbjct: 130 GVECFGSSNPATDVETIAMAAHFLKEIGIQGVKLHLNTLGNPESRAAYRQALIDYLTPLK 189

Query: 443 -----DAENIMKG----VLDTIKNSSQDR-------INTGVLLGEGAFYGPK-------F 479
                D++  ++     VLD+ +   +         ++      +  F   +        
Sbjct: 190 ETLSKDSQRRLEENPLRVLDSKEKEDKVAVENAPSILDFLDEESQTHFDAVRQMLENLGV 249

Query: 480 EYILKDAI--GRDWQCGTIQVDFNLPSRFNAFYVN---SHSEKCHPVMIHRAVFG---SI 531
           +YI+   +  G D+   TI          +              +      A FG    +
Sbjct: 250 DYIIDTNMVRGLDYYNHTIFEFITEIEGNDLTVCAGGRYDGLVAYFGGPETAGFGFGLGV 309

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           ER + I+    +G      + +   +  +   A   A E+   L+      E D+ N  +
Sbjct: 310 ERLLLIL--EKQGVTLPIENALDVYIAVLGEGANAKALELVQALRQQGFKAERDYLNRKL 367

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
             + +   +     +I  G+ E     + ++   +    +VSL 
Sbjct: 368 KAQFKSADVFVAKTLITLGESEVESGQVTVKNNQTREEVQVSLE 411


>gi|153006815|ref|YP_001381140.1| seryl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
 gi|152030388|gb|ABS28156.1| seryl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
          Length = 463

 Score = 61.0 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 22/177 (12%), Positives = 53/177 (29%), Gaps = 14/177 (7%)

Query: 282 YMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNC 341
           ++       Y EI  P ++       +G    +  ++F  +             L P   
Sbjct: 211 FVDVHTSRGYTEILPPYLVTAETMTGTGQLPKFEEDLFKTQG-------ESPMYLIPTAE 263

Query: 342 PGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKE 398
                +    +    +LP+    +   +R E   +     GL+R   F + +   F   E
Sbjct: 264 VPVTNMHRDEIFEANQLPISYCAWTPCFRAEAGAAGRDTRGLIRQHQFHKVELVKFAKAE 323

Query: 399 QMFNECLKIHNLIISIYKDFGFEKI----MVKLSTRPEKRVGSDALWDDAENIMKGV 451
           + + E  K+ +    + +  G                  +     +W   ++  + +
Sbjct: 324 ESYAEHEKMVDDACEVLRRLGLHHRVSLLCTGDMGFSSAKTYDVEVWCPGQDQFREI 380


>gi|94497464|ref|ZP_01304034.1| seryl-tRNA synthetase [Sphingomonas sp. SKA58]
 gi|94423095|gb|EAT08126.1| seryl-tRNA synthetase [Sphingomonas sp. SKA58]
          Length = 425

 Score = 61.0 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 60/188 (31%), Gaps = 18/188 (9%)

Query: 273 WKIFQTLISYMRRK--IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M  +  + + YEE   P ++       +G    +  ++F          D
Sbjct: 171 ARLHRALAQFMLDQQTVANGYEETIVPLLVKDAALFGTGQLPKFAEDLFKTT-------D 223

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFT 387
            R     P        +    +     LP+RL      +R+E   +     G +R   F 
Sbjct: 224 GRWLI--PTAEVSLTNLVADQIVPEERLPLRLTALTPCFRSEAGSAGRDTRGFIRQHQFE 281

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +    C  E+   E  ++      I +        + L T              +W  
Sbjct: 282 KVELVTICRPEESEAEHERMVAAAEGILQALALPYRKMLLCTGDMGFGARKTYDLEVWLP 341

Query: 444 AENIMKGV 451
           +++  + +
Sbjct: 342 SQDTYREI 349


>gi|121606224|ref|YP_983553.1| seryl-tRNA synthetase [Polaromonas naphthalenivorans CJ2]
 gi|166222759|sp|A1VSK4|SYS_POLNA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|120595193|gb|ABM38632.1| seryl-tRNA synthetase [Polaromonas naphthalenivorans CJ2]
          Length = 444

 Score = 61.0 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 35/223 (15%), Positives = 76/223 (34%), Gaps = 13/223 (5%)

Query: 242 EKRDHRKLAREMDL-FHIAEDGSGVIFWHRKG--WKIFQTLISYMRRKIKD--DYEEINT 296
           E RDH  + + + L F +    +G  F   KG   ++ + L  +M         Y E   
Sbjct: 145 EPRDHVDVGQPLGLDFELGTKLTGSRFTVMKGPLARLHRALSQFMLDVQTAEHGYTECYV 204

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAV-KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           P +++    + +G    +  ++FA  K   +   +     L P +           +   
Sbjct: 205 PYIVNSDSLRGTGQLPKFEEDLFAARKGGQEGQAENAALYLIPTSEVPLTNFVRDEVVPE 264

Query: 356 RELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
            +LP++       +R+E         G++R   F + +       E+ +     +     
Sbjct: 265 AQLPLKFTAHTPCFRSEAGSYGRDTRGMIRQHQFDKVEMVQVVHPEKSYEALEAMTGHAE 324

Query: 413 SIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
            I +  G    ++ L T              +W  A++  + +
Sbjct: 325 VILQKLGLPYRVMLLCTGDMGFGATKTYDLEVWLPAQSTYREI 367


>gi|315125679|ref|YP_004067682.1| alanyl-tRNA synthetase [Pseudoalteromonas sp. SM9913]
 gi|315014193|gb|ADT67531.1| alanyl-tRNA synthetase [Pseudoalteromonas sp. SM9913]
          Length = 866

 Score = 61.0 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 30/145 (20%), Positives = 62/145 (42%), Gaps = 11/145 (7%)

Query: 63  TPEDPRSLAVI-RHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELA 120
           T +D R  ++   H+  HI+ EA++ +  E     G +++ D   +DF   +  +  EL 
Sbjct: 542 TIDDARRDSIKKNHTATHILHEALRQLLGEHVSQKGSLVQPDRLRFDFSHFEAVTKQELR 601

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW- 179
           +IE+ + + I R+     + ++ + A+          K          + V +   G++ 
Sbjct: 602 EIERVVNDEIRRNFALNTELMAIDDAKAKGAMALFGEKY--------DDEVRVVTIGDYS 653

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVA 204
            +LC G HV   G +  F  + +  
Sbjct: 654 IELCGGTHVERAGDIGLFKIVSESG 678


>gi|315284062|ref|ZP_07872027.1| seryl-tRNA synthetase [Listeria marthii FSL S4-120]
 gi|313612292|gb|EFR86469.1| seryl-tRNA synthetase [Listeria marthii FSL S4-120]
          Length = 427

 Score = 61.0 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 37/244 (15%), Positives = 87/244 (35%), Gaps = 22/244 (9%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIF 276
           G + +   E+ ++    E   E + H  L  ++D+          GS  +F+ + G ++ 
Sbjct: 115 GESEDDNVEIRKWGEVREFDFEPKAHWDLGTDLDILDFENAAKVTGSRFVFYKKLGARLE 174

Query: 277 QTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           + LI++M     +   YEE+  P ++++     +G    +  + F +        +   +
Sbjct: 175 RALINFMMDLHSNEHGYEEMLPPYMVNRASMTGTGQLPKFEEDAFLI--------EAEDY 226

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDA 391
            L P             +    +LP +   F + +R+E   +     GL+R   F + + 
Sbjct: 227 FLIPTAEVPVTNYHREDILKAEDLPRKYTAFSACFRSEAGSAGRDTRGLIRQHQFNKVEL 286

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENI 447
             F   E  +    K+      + +       ++ + T              +W  + N 
Sbjct: 287 VQFVKPEDSYAALEKLTGNAEEVLRRLELPYRVLSMCTADLGFTAAKKYDLEVWIPSYNS 346

Query: 448 MKGV 451
            + +
Sbjct: 347 YREI 350


>gi|297851408|ref|XP_002893585.1| hypothetical protein ARALYDRAFT_890516 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339427|gb|EFH69844.1| hypothetical protein ARALYDRAFT_890516 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 576

 Score = 61.0 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 57/362 (15%), Positives = 113/362 (31%), Gaps = 51/362 (14%)

Query: 314 YRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNE 372
           Y  N+        + +   T  ++P    G    FN   + + ++LP    + G  +RNE
Sbjct: 192 YPFNLMFKTSIGPSGQH--TGYMRPETAQGIFCNFNELYRYNGKKLPFAAVQVGQAFRNE 249

Query: 373 PSGSLHGLMRVRGFTQDD----------AH------------VFCTKEQMFNECLKIHNL 410
            S     L RVR FT  +          +H            +F  +EQ+  +      L
Sbjct: 250 ISPRQGPL-RVREFTLAEIEHFIHPGNKSHPKFSRVAKLEFLMFPREEQVSGQSATKLCL 308

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG 470
             ++ K     + +     R    +    +  D     + + + + + + D  +  +   
Sbjct: 309 GEAVAKGTVNNETLGYFIGRVYLFLTRLGIDKDRLRFRQHLANEMAHYAVDCWDAEIETS 368

Query: 471 EGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
            G  +        + A         + +  N+ S                V+        
Sbjct: 369 YG--WIECVGIADRAAYDLRAHSKNVTIQKNMVSISKEKKKVYQGSFTSSVI---EPSFG 423

Query: 531 IERFIGIMIENF-------KGN-------LPLWLSPIQAIV--TTITSSAVEYAQEIANL 574
           I R +  + E+         G+        P  ++P   +V          E  + I+  
Sbjct: 424 IGRIVYCLCEHCFSTMPSKAGDEQLNVFRFPPLVAPKMCMVFPLVKNQQFEETTRLISEE 483

Query: 575 LKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           L S  +  + D +  +I  +  +     +P  I   D E     + IR   S    +VSL
Sbjct: 484 LTSCRIDHDIDMKGISIGKRYVKSDELGVPFAITV-DSET---PVTIRERDSKDQVRVSL 539

Query: 635 LD 636
            +
Sbjct: 540 KE 541


>gi|242243248|ref|ZP_04797693.1| seryl-tRNA synthetase [Staphylococcus epidermidis W23144]
 gi|242233197|gb|EES35509.1| seryl-tRNA synthetase [Staphylococcus epidermidis W23144]
          Length = 435

 Score = 61.0 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 54/371 (14%), Positives = 121/371 (32%), Gaps = 37/371 (9%)

Query: 101 EDGFYYDF-----DKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSH-EKARELFESKK 154
           ++G+  D      + E+  S  EL   + K+ + +       ++ +S  E+ +       
Sbjct: 4   DEGYMLDIRLFRNEPEKVKSKIELRGDDPKVVDQVLELDEQRRELISKTEEMKAKRNKVS 63

Query: 155 EAYKVEILESIPAKENVTLYRQ-GEWFDLCRGPHVRSTGQVK----KFFKLMKVAGAYWR 209
           E    +      A + +   R  G+              +++    +   L+        
Sbjct: 64  EEIAQKKRNKEDADDVIAEMRHLGDEIKDIDNQLNEVDNKIRDILIRIPNLINEDVPQGA 123

Query: 210 GDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWH 269
            D     + + +GT  + + E   +   +EE +  D  + A+      +           
Sbjct: 124 SDEENVEVKK-WGTPRDFEFEPKAHWDLVEELKMADFERAAKVSGARFVYLTK------- 175

Query: 270 RKGWKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
             G  + + L++YM  K   +  Y E+ TPQ+++      +G    +  ++F V      
Sbjct: 176 -DGALLERALMNYMLTKHTTQHGYTEMMTPQLVNADTMFGTGQLPKFEEDLFKV------ 228

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVR 384
             +       P         +   +     LP       + +R+E   +     GL+R+ 
Sbjct: 229 --EKEGLYTIPTAEVPLTNFYRDEIIQPGVLPELFTAQTACFRSEAGSAGRDTRGLIRLH 286

Query: 385 GFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDAL 440
            F + +       E  +N   ++     +I ++ G     V L T              +
Sbjct: 287 QFDKVEMVRIVQPEDSWNALEEMTQNAEAILEELGLPYRRVILCTGDIGFSASKTYDLEV 346

Query: 441 WDDAENIMKGV 451
           W  + N  K +
Sbjct: 347 WLPSYNDYKEI 357


>gi|227488798|ref|ZP_03919114.1| histidyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51867]
 gi|227091220|gb|EEI26532.1| histidyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51867]
          Length = 405

 Score = 61.0 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 61/409 (14%), Positives = 126/409 (30%), Gaps = 58/409 (14%)

Query: 280 ISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPM 339
            ++     +  +E I  P   D HL+ +         ++   +      +  R+  L+P 
Sbjct: 13  ETFTHEAQRAGFEHIELPIFEDTHLFARG---VGESTDVVTKEMYTFEDRGGRSVTLRPE 69

Query: 340 NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQ 399
              G +           +LPV+L   G  +R E   +     R R   Q         + 
Sbjct: 70  GTAGVMRAVIEHNLDRGQLPVKLVYSGPFFRYERPQA----GRYRQLQQVGVEAIGVDDP 125

Query: 400 MFNECLKIHNLIISIYKDFGFE----------KIMVKLSTRPEKRVG------SDALWDD 443
             +   +I  L    YK  G                + + R + +         +     
Sbjct: 126 ALDA--EIIALADRCYKSVGLTGYRLDLSSLGDAECRPAYREKLQAFLRKLPLDEETQRR 183

Query: 444 AE---------------NIMKGV---LDTIKNSSQDRIN--TGVLLGEGAFYG--PKF-- 479
           AE                ++      LD + NSS++      G+L   G  Y   PK   
Sbjct: 184 AEINPLRVLDDKRPEVQEMLVDAPLLLDHLSNSSREHFEVVKGLLGDFGVSYTINPKLVR 243

Query: 480 --EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
             +Y  K       +    Q       R++        ++   +       G     + +
Sbjct: 244 GLDYYTKTCFEFVHEGLGAQSGIGGGGRYDGLMAQLGGQELSGIGF---GLGVDRTLLAL 300

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
             E      P     +      + S A      + N L++  +S +  + +  +   ++ 
Sbjct: 301 EAEGVSAGSP---RRVDVYGVPLGSEAKRVLAGVVNNLRAAGVSTDMSYGDRGLKGAMKG 357

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
            S       ++ G++E ++ ++ +R   +   + VSL  A+    +E L
Sbjct: 358 ASRSGARYCLVLGEQELADGNVAVRDMNNHEQETVSLS-AVQAFLEERL 405


>gi|148255774|ref|YP_001240359.1| seryl-tRNA synthetase [Bradyrhizobium sp. BTAi1]
 gi|166200604|sp|A5EJV9|SYS_BRASB RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|146407947|gb|ABQ36453.1| seryl-tRNA synthetase [Bradyrhizobium sp. BTAi1]
          Length = 442

 Score = 61.0 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 33/223 (14%), Positives = 71/223 (31%), Gaps = 17/223 (7%)

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFW--HRKG-WKIFQTLISYMRRKI--KDD 290
                   R H ++   + +   +        +   +KG  ++ + +  +M      +  
Sbjct: 131 RRNYAFAPRPHDEIGAALGMDFESAAKLSGARFVVLKKGLARLERAIGQFMLDLHTTEHG 190

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFA-----VKCADDTIKDLRTFALKPMNCPGHV 345
           Y EIN P ++   +   +G    +  + F      +  A D         L P       
Sbjct: 191 YTEINPPLLVRNDVMFGTGQLPKFEDDQFWAVRGELLIAPDERLKTERLGLIPTAEVALT 250

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFN 402
            +    +   +ELP+RL      +R E   +     G++R   FT+ +     T E   +
Sbjct: 251 NLVRESIVDEKELPMRLTALTPCFRAEAGAAGRDTRGMIRQHQFTKVELVSITTPETSKD 310

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALW 441
           E  ++      + +       ++ L T              +W
Sbjct: 311 EHERMLACAEEVLRRLDLHYRVITLCTGDMGFSSQKTYDIEVW 353


>gi|168184974|ref|ZP_02619638.1| serine--tRNA ligase [Clostridium botulinum Bf]
 gi|182671959|gb|EDT83920.1| serine--tRNA ligase [Clostridium botulinum Bf]
          Length = 426

 Score = 61.0 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 86/236 (36%), Gaps = 22/236 (9%)

Query: 220 IYGTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWK 274
             G       E+  +L   +   E + H  +   +++          GS   F+   G +
Sbjct: 115 PDGETDEDNIEIRNWLEPTKFDFEPKAHWDIGTNLNILDFQRAGKVTGSRFTFYKGLGAR 174

Query: 275 IFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           + + +ISY      +   Y EI  P ++++     +G    +  + F +   D       
Sbjct: 175 LERAVISYFLDTHTEKHGYIEILPPYMVNRTSMIGTGQLPKFEEDAFKISEDD------- 227

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQD 389
            + L P        ++   +    ELP++   + + +R+E   +     GL+R   F + 
Sbjct: 228 -YFLIPTAEVPVTNLYRDEVLKGDELPLKHVAYSACFRSEAGSAGRDTRGLVRQHQFNKV 286

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALW 441
           +   F   EQ ++E  K+ N   ++ K+ G    +V++                +W
Sbjct: 287 ELVKFTKPEQSYDELGKLTNDAETVLKELGIPYRVVRICKGDLGFTAALKYDLEVW 342


>gi|315305180|ref|ZP_07875168.1| seryl-tRNA synthetase [Listeria ivanovii FSL F6-596]
 gi|313626448|gb|EFR95593.1| seryl-tRNA synthetase [Listeria ivanovii FSL F6-596]
          Length = 437

 Score = 61.0 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 36/244 (14%), Positives = 87/244 (35%), Gaps = 22/244 (9%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIF 276
           G + +   E+ ++    E   E + H  +  ++D+          GS  +F+ + G ++ 
Sbjct: 124 GESEDDNIEIRKWGEVREFDFEPKAHWDIGTDLDILDFENAAKVTGSRFVFYKKLGARLE 183

Query: 277 QTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           + LI++M     +   YEE+  P ++++     +G    +  + F +        +   +
Sbjct: 184 RALINFMMDLHSNEHGYEEMLPPYMVNRASMTGTGQLPKFEEDAFLI--------EAEDY 235

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDA 391
            L P             +    +LP +   F + +R+E   +     GL+R   F + + 
Sbjct: 236 FLIPTAEVPVTNYHREDILKAEDLPRKYTAFSACFRSEAGSAGRDTRGLIRQHQFNKVEL 295

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENI 447
             F   E  +    K+      + +       ++ + T              +W  + N 
Sbjct: 296 VQFVKPEDSYAALEKLTENAEEVLRRLELPYRVLSMCTADLGFTAAKKYDLEVWIPSYNS 355

Query: 448 MKGV 451
            + +
Sbjct: 356 YREI 359


>gi|73959373|ref|XP_547245.2| PREDICTED: similar to seryl-tRNA synthetase isoform 1 [Canis
           familiaris]
          Length = 339

 Score = 61.0 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 57/165 (34%), Gaps = 11/165 (6%)

Query: 271 KGWKIF--QTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
           KG  +F  Q LI Y +R      Y  I TP  + + + Q+      +   ++ V      
Sbjct: 22  KGVLVFLEQALIQYALRTLGSRGYTPIYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGSE 81

Query: 328 IKDLRTFALKP---MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLM 381
             D  ++  K     +     A+         +LP++ A   + +R E         G+ 
Sbjct: 82  KSDDNSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGRDTRGIF 141

Query: 382 RVRGFTQDDAHVFCTKEQ--MFNECLKIHNLIISIYKDFGFEKIM 424
           RV  F + +  V+ +      +    ++       Y+  G    +
Sbjct: 142 RVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEDFYQSLGIPYHI 186


>gi|281413080|ref|YP_003347159.1| histidyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
 gi|281374183|gb|ADA67745.1| histidyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
          Length = 420

 Score = 61.0 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 64/411 (15%), Positives = 130/411 (31%), Gaps = 58/411 (14%)

Query: 276 FQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           ++ +    R   +    EEI TP      L+ +S       +++   +      K  R+ 
Sbjct: 20  WRYVEETFRNVCESAGIEEIRTPIFEQTELFVRS---VGEESDIVQKEMYTFQDKAGRSI 76

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
            L+P      V  F       R    R    G ++R E   S     R+R F Q      
Sbjct: 77  TLRPEGTAPVVRAFLENSLVDRGFQQRYYYVGPMFRYEKPQS----GRLRQFHQV-GFEI 131

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST---RPEKRVGSDALWDDAENIMKGV 451
              E    +  ++  L+ +  +  G  K  + L++      ++   +AL +    ++  +
Sbjct: 132 IGPESPKAD-FEMIILVDTFLRRLGLTKYKIHLNSIGCPVCRKNYREALKEYYGQVLDNL 190

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYG---PK-FEYILKDAIGR----------------DW 491
            D  K   +  I   +       Y    PK  +Y+                       + 
Sbjct: 191 CDDCKRRYETNILRLLDCKVDHEYALNAPKSVDYLCDSCRAHYKKLKEYLNTFEIEYVED 250

Query: 492 QCGTIQVDFNLPSRFNAFYVN------------SHS---EKCHPVMIHRAVFGSIERFIG 536
                 +D+   + F   +                    E     +      G IER I 
Sbjct: 251 HTLVRGLDYYTRTVFEVRHEGLGAQNAIAGGGRYDGLFAELGGSSVPALGFAGGIERIIL 310

Query: 537 IM----IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
            +    IE    N+ L        + T+   A     ++A  L+   LS++ D  +  ++
Sbjct: 311 ALKAEGIEIPMKNVHL------VYIATLGEKAFMDGVQLAGELRKKGLSVDVDIMDRKLS 364

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +++  S       +I GD+E  +  + +R   +    ++    A   + +
Sbjct: 365 GQLKHASRMGSRYAVIIGDEELEKGIVILRDLETGDQVEIDRDFAADYIAE 415


>gi|261821270|ref|YP_003259376.1| seryl-tRNA synthetase [Pectobacterium wasabiae WPP163]
 gi|261605283|gb|ACX87769.1| seryl-tRNA synthetase [Pectobacterium wasabiae WPP163]
          Length = 431

 Score = 61.0 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 25/188 (13%), Positives = 61/188 (32%), Gaps = 10/188 (5%)

Query: 273 WKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M      +  Y+E   P +++      +G    +  ++F      +   D
Sbjct: 171 ARLHRALAQFMLDLHTQQHGYQEAYVPYLVNHATLYGTGQLPKFGEDLFHTNPLSEEA-D 229

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
              +AL P        +    +     LP+++      +R+E         GL+R+  F 
Sbjct: 230 SSQYALIPTAEVPLTNLVRDEILDEESLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFD 289

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E       ++     ++ +        V L T              +W  
Sbjct: 290 KVELVQIVRPEDSMQALEELTTHAETVLQLLKLPYRKVLLCTGDMGFGSTKTYDLEVWLP 349

Query: 444 AENIMKGV 451
           A++  + +
Sbjct: 350 AQDTYREI 357


>gi|238027072|ref|YP_002911303.1| histidyl-tRNA synthetase [Burkholderia glumae BGR1]
 gi|237876266|gb|ACR28599.1| Histidyl-tRNA synthetase [Burkholderia glumae BGR1]
          Length = 446

 Score = 61.0 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 61/435 (14%), Positives = 131/435 (30%), Gaps = 80/435 (18%)

Query: 269 HRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ--QSGHWDSYRANMFAVKCAD 325
             +   +++   +  +  ++   Y+ I TP V    L+        D     M++     
Sbjct: 21  LPQDAALWEFFEATAKSLLRAYGYQNIRTPIVEHTQLFTRGIGEVTDIVEKEMYSFTD-- 78

Query: 326 DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRG 385
               +     ++P N    V   +       + P RL   G ++R+E         R R 
Sbjct: 79  --SLNGENLTMRPEN-TAAVVRASIEHNLLYDGPKRLWYIGPMFRHERPQR----GRYRQ 131

Query: 386 FTQD--DAHVFCTKEQMFNECLKIHNLIISIYKDFG--------------FEKIMVKLST 429
           F Q   +A  F   +       +I  +   ++ D G               E+   ++  
Sbjct: 132 FHQVGVEALGFAGPDADA----EIIMMCQRLWDDLGLTGIKLEINSLGLAEERAAHRVEL 187

Query: 430 RPEKRVGSDALWDDAENIM-----------KGVLDTIKNSSQDRINTGVLLGEGAFYGP- 477
                  +D L +DA+  +              L  I  ++   I+         F G  
Sbjct: 188 IKYLEQFADQLDEDAKRRLYTNPLRVLDTKNPALQEIAQNAPKLIDFLGDTSRAHFEGLQ 247

Query: 478 ------KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIH------- 524
                    + +   + R      + V   +  +  A    +   +  P++         
Sbjct: 248 RLLKANNVPFTINPRLVRGLDYYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQLGGKPTA 307

Query: 525 RAVFGS-IERFIGIMIENFKGNLPLWLSPIQ----AIVTTITSSAVEYAQEIANLLKSHH 579
              +   IER + ++ E         L P Q      +     +A E A  I   L+   
Sbjct: 308 ACGWAMGIERILELLKEEQ-------LVPEQDGVDVYIVHQGEAAREQAFIIGERLRDTG 360

Query: 580 LSI----ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS-------TT 628
           L +      D  + +   +++          +I G+ E +  ++G++           + 
Sbjct: 361 LDVIFHCSADGASASFKSQMKRADASGAAYAVILGEDEVANGTVGVKALRGAGADGEKSE 420

Query: 629 TQKVSLLDAIPILTK 643
            Q V++ +    L  
Sbjct: 421 QQTVTVENLTEFLIN 435


>gi|170289504|ref|YP_001739742.1| histidyl-tRNA synthetase [Thermotoga sp. RQ2]
 gi|229558740|sp|B1L829|SYH_THESQ RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|170177007|gb|ACB10059.1| histidyl-tRNA synthetase [Thermotoga sp. RQ2]
          Length = 420

 Score = 61.0 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 64/411 (15%), Positives = 129/411 (31%), Gaps = 58/411 (14%)

Query: 276 FQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           ++ +    R   +    EEI TP      L+ +S       +++   +      K  R+ 
Sbjct: 20  WRYVEETFRNVCESAGIEEIRTPIFEQTELFVRS---VGEESDIVQKEMYTFQDKAGRSI 76

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
            L+P      V  F       R    R    G ++R E   S     R+R F Q      
Sbjct: 77  TLRPEGTAPVVRAFLENSLIDRGFQQRYYYIGPMFRYEKPQS----GRLRQFHQV-GFEI 131

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST---RPEKRVGSDALWDDAENIMKGV 451
              E    +  ++  L+ +  +  G  K  + L++      ++   +AL +    ++  +
Sbjct: 132 IGPESPKAD-FEVIMLVDTFLRRLGLTKYKIHLNSIGCPVCRKNYREALKEYYGQVLDNL 190

Query: 452 LDTIKNSSQDRINTGVLLGEGAFY---GPK-FEYILKDAIGR----------------DW 491
            D  K   +  I   +       Y    PK  +Y+                       + 
Sbjct: 191 CDDCKRRYETNILRLLDCKVDHEYSLNAPKSVDYLCDSCRAHYKKLKEYLNTFEIEYVED 250

Query: 492 QCGTIQVDFNLPSRFNAFYVN------------SHS---EKCHPVMIHRAVFGSIERFIG 536
                 +D+   + F   +                    E     +      G IER I 
Sbjct: 251 HTLVRGLDYYTRTVFEVRHEGLGAQSAIAGGGRYDGLFAELGGSSVPALGFAGGIERIIL 310

Query: 537 IM----IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
            +    IE    N+ L        + T+   A      +A  L+   LS++ D  +  ++
Sbjct: 311 ALKAEGIEIPMKNVHL------VYIATLGEKAFMDGVRLAGELRKKGLSVDVDIMDRKLS 364

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +++  S       +I GD+E  +  + +R   +    ++    A   + +
Sbjct: 365 GQLKHASRMGSRYAVIIGDEELEKGIVILRDLETGDQVEIDRDFAADYIAE 415


>gi|149190995|ref|ZP_01869256.1| seryl-tRNA synthetase [Vibrio shilonii AK1]
 gi|148835129|gb|EDL52105.1| seryl-tRNA synthetase [Vibrio shilonii AK1]
          Length = 435

 Score = 61.0 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 39/248 (15%), Positives = 83/248 (33%), Gaps = 16/248 (6%)

Query: 220 IYGTAWNTQQELTQYLY-FLEESEKRDHRKLAREMD--LFHIAEDGSGVIFWHRKG--WK 274
             G   N   E++++      + E +DH  L    D   F  A   +G  F   KG   +
Sbjct: 114 PQGKDENDNVEISRWGEPKSYDFEVKDHVDLGEMGDGLDFASATKITGARFIVMKGQFAR 173

Query: 275 IFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL- 331
           + + +  +M     +   Y E+  P +++      +G    +  ++F  +   +   D  
Sbjct: 174 LHRAIAQFMLDLHTEEHGYTEMYVPYLVNADSLFGTGQLPKFGKDLFHTEPLTEKASDEE 233

Query: 332 -RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
            R  +L P        +    +    +LP+++      +R+E         GL+R+  F 
Sbjct: 234 PRKLSLIPTAEVPVTNLVRDTISEEADLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFD 293

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E   N   ++      + +        V L T              +W  
Sbjct: 294 KVELVQITKPEDSMNALEELTGHAEKVLQLLELPYRKVVLCTGDMGFGARKTYDLEVWVP 353

Query: 444 AENIMKGV 451
           A+   + +
Sbjct: 354 AQETYREI 361


>gi|114558175|ref|XP_001148764.1| PREDICTED: similar to seryl-tRNA synthetase isoform 8 [Pan
           troglodytes]
          Length = 539

 Score = 61.0 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 57/165 (34%), Gaps = 11/165 (6%)

Query: 271 KGWKIF--QTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
           KG  +F  Q LI Y +R      Y  I TP  + + + Q+      +   ++ V      
Sbjct: 197 KGVLVFLEQALIQYALRTLGSRGYIPIYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGSE 256

Query: 328 IKDLRTFALKP---MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLM 381
             D  ++  K     +     A+         +LP++ A   + +R E         G+ 
Sbjct: 257 KSDDNSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGRDTRGIF 316

Query: 382 RVRGFTQDDAHVFCTKEQ--MFNECLKIHNLIISIYKDFGFEKIM 424
           RV  F + +  V+ +      +    ++       Y+  G    +
Sbjct: 317 RVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHI 361


>gi|55959084|emb|CAI13600.1| seryl-tRNA synthetase [Homo sapiens]
          Length = 536

 Score = 61.0 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 57/165 (34%), Gaps = 11/165 (6%)

Query: 271 KGWKIF--QTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
           KG  +F  Q LI Y +R      Y  I TP  + + + Q+      +   ++ V      
Sbjct: 197 KGVLVFLEQALIQYALRTLGSRGYIPIYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGSE 256

Query: 328 IKDLRTFALKP---MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLM 381
             D  ++  K     +     A+         +LP++ A   + +R E         G+ 
Sbjct: 257 KSDDNSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGRDTRGIF 316

Query: 382 RVRGFTQDDAHVFCTKEQ--MFNECLKIHNLIISIYKDFGFEKIM 424
           RV  F + +  V+ +      +    ++       Y+  G    +
Sbjct: 317 RVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHI 361


>gi|331701367|ref|YP_004398326.1| histidyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
 gi|329128710|gb|AEB73263.1| Histidyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
          Length = 435

 Score = 61.0 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 68/428 (15%), Positives = 135/428 (31%), Gaps = 67/428 (15%)

Query: 269 HRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
                + +  +    R    D  Y+EI TP   +  ++ ++       +++   +  D  
Sbjct: 13  LPGEAQKWNYVEETARMLFDDYRYQEIRTPMFENFDVFSRTS---GDTSDVVTKEMYDFN 69

Query: 328 IKDLRTFALKPMNCPGHVAVF--NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRG 385
            K  R  +L+P    G V  F  N         PV++   GS++R E   S     R R 
Sbjct: 70  DKGDRHMSLRPEGTAGVVRAFVENKLYGPEHPRPVKVFYMGSMFRYERPQS----GRQRE 125

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFG--------------FEKIMVKLSTRP 431
           F Q     F + E   +   ++  + + + K FG                +   + +   
Sbjct: 126 FHQIGVEAFGSNEPELDV--EVIAMGMDLLKHFGLSGLRLEINSLGDKASRDAYRQALID 183

Query: 432 EKRVGSDALWDDAENIMKG----VLD-------TIKNSSQDRINTGVLLGEGAFYGPKFE 480
                 D L DD++  +      VLD        I   +   ++      +  F   K  
Sbjct: 184 YLDPHFDELSDDSKVRLHKNPLRVLDSKDKRDQEIVKGAPSILDYLNEDSQKHFDKVK-- 241

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEK---------------------CH 519
             L +++   +      V          F +   S+                        
Sbjct: 242 -HLLESLNIPYVVDPDMVRGLDYYNHTIFEIMVDSKALGEGYTTICAGGRYNGLVEQLGG 300

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH 579
           P M        +ER +  ++   +G     L  + A V  I         +I   L++  
Sbjct: 301 PEMPGIGFGLGMERLM--LLMEAQGVKFPVLDQLDAYVVGIGEQTSVLTLQIVQALRADG 358

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL---- 635
            + + D+ +     + +  +       I  G+ E  +++  +++  + T   V L     
Sbjct: 359 FAADRDYLDRKPKAQFKTANKLNAQYTITIGESELEKKTANVKQMRTGTEVSVPLAEIFK 418

Query: 636 DAIPILTK 643
           D   I+TK
Sbjct: 419 DFDEIITK 426


>gi|221066868|ref|ZP_03542973.1| alanyl-tRNA synthetase [Comamonas testosteroni KF-1]
 gi|220711891|gb|EED67259.1| alanyl-tRNA synthetase [Comamonas testosteroni KF-1]
          Length = 874

 Score = 61.0 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 58/142 (40%), Gaps = 9/142 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFS 115
            ++E       R+  +  HS  HIM +A++ +        G  +  +   +DF    P +
Sbjct: 546 DAVEAQVDTAVRAATMRNHSVTHIMHKALREVLGGHVQQKGSLVNAERTRFDFAHNAPVT 605

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           ++++ +IE ++   +  ++P   + +  E A++         K          E V +  
Sbjct: 606 AEQIREIEARVNAEVLANTPTDARVMDIESAQKTGAMMLFGEKY--------GETVRVLD 657

Query: 176 QGEWFDLCRGPHVRSTGQVKKF 197
            G   +LC G HV  TG +  F
Sbjct: 658 IGSSRELCGGTHVSRTGDIGLF 679


>gi|119576772|gb|EAW56368.1| seryl-tRNA synthetase, isoform CRA_d [Homo sapiens]
          Length = 539

 Score = 61.0 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 57/165 (34%), Gaps = 11/165 (6%)

Query: 271 KGWKIF--QTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
           KG  +F  Q LI Y +R      Y  I TP  + + + Q+      +   ++ V      
Sbjct: 197 KGVLVFLEQALIQYALRTLGSRGYIPIYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGSE 256

Query: 328 IKDLRTFALKP---MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLM 381
             D  ++  K     +     A+         +LP++ A   + +R E         G+ 
Sbjct: 257 KSDDNSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGRDTRGIF 316

Query: 382 RVRGFTQDDAHVFCTKEQ--MFNECLKIHNLIISIYKDFGFEKIM 424
           RV  F + +  V+ +      +    ++       Y+  G    +
Sbjct: 317 RVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHI 361


>gi|308233928|ref|ZP_07664665.1| histidyl-tRNA synthetase [Atopobium vaginae DSM 15829]
          Length = 436

 Score = 61.0 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 18/112 (16%), Positives = 46/112 (41%), Gaps = 2/112 (1%)

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
            ER I  +     G  P   +P    V   + +   YA  +   L+   +  E++++  +
Sbjct: 324 FERMILAL--QTFGTQPWKTTPACVYVAFTSDAERMYAFNVCAQLRQAGIRTESNYQGRS 381

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +  + ++       + ++ G+ E   +S+ +R   +    ++ L + +  LT
Sbjct: 382 LKSQFKQADKLGARLCVVIGEHETQNQSVTVRDMQTHEQTEIQLTNLVSQLT 433


>gi|223996551|ref|XP_002287949.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220977065|gb|EED95392.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 398

 Score = 61.0 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 61/187 (32%), Gaps = 9/187 (4%)

Query: 273 WKIFQTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
            ++ + + SY + R  +  Y E++ P V+ +   + +     +  ++F +     T    
Sbjct: 134 ARLERAISSYFLDRASEKGYTEVSPPLVVSRSALEGTSQLPKFEEDLFKIVPESHTCNGQ 193

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQ 388
             F + P        +  + +    +LP+        +R E         GL+R   F +
Sbjct: 194 DAFLI-PTAEVPLTNMHANQILEESDLPISYCAMTPCFRAEAGSYGRDTRGLIRTHQFYK 252

Query: 389 DDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDA 444
            +     T E   NE  K+        ++       ++L +               W  +
Sbjct: 253 VELVKITTAETSANEHEKLTRHAEECLEELKIPFRKMRLCSGDVGFSAQHCYDLEAWLPS 312

Query: 445 ENIMKGV 451
               + +
Sbjct: 313 TGEYREI 319


>gi|157828289|ref|YP_001494531.1| histidyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|157800770|gb|ABV76023.1| histidyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila
           Smith']
          Length = 404

 Score = 61.0 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 70/426 (16%), Positives = 145/426 (34%), Gaps = 77/426 (18%)

Query: 269 HRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
               +K+   +I+  R   +   Y++++TP V    ++ +S       +++ + +     
Sbjct: 5   LPDDYKVHDYIINKARDVGVLYGYKQMSTPIVEYTKVFNRS---MGESSDVISKEIYSFL 61

Query: 328 IKDLRTFALKP--MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRG 385
            K     AL+P    C     + N   +   +LP++    G V+R +   +     R R 
Sbjct: 62  DKSNDCVALRPEFTACIIRSLISN---RLQHKLPLKFFSTGPVFRYDRPQA----GRQRQ 114

Query: 386 FTQDD-AHVFCTKEQMFNECLKIHNLIISIYKD----------FGFEKIMVKLSTRPEKR 434
           F Q +  ++         + LK+   I+   +            G  +       +  + 
Sbjct: 115 FHQLNYEYIGAKGAITDADTLKLAVDILKALEIEQDTTLELNSLGCNESRRVYQQKLVEY 174

Query: 435 VGSDALWDDAENIMK------GVLDTIKNSSQD-----RINTGVLLGEGAFY-------- 475
           +         E+ ++       +LD+   + Q       + +     E   Y        
Sbjct: 175 LNDFKEQLSEESKIRLSKNPMRILDSKSETDQKIIANAPVLSEYYTDESKEYFEELIQYL 234

Query: 476 ---GPKFEYILKDAIGRDWQCGTI----------QVDFNLPSRFNAFYVNSHSEKCHPVM 522
              G K+    +   G D+ C T           Q       R++       +    P +
Sbjct: 235 DILGVKYSINPRLVRGLDYYCHTAFEFTTKKLGSQSTILAGGRYDGLAKIMGNNDDVPAI 294

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSI 582
                   IER I +M E     +          V  I  + + YA EI + L++ +++I
Sbjct: 295 ---GFAAGIER-IALMREYDVSEVKP------VFVLPIGKNNICYALEIVDKLRTENIAI 344

Query: 583 ETDFRNETINYKIREHSIKKI-----PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
                 E++  KI +  +++I       II  GD+E +  ++ I+         V    A
Sbjct: 345 II----ESLG-KIAK-RMQRIFNENAQFIIFIGDEEQANNNLKIKDLKKEEEYIVDFAKA 398

Query: 638 IPILTK 643
           + +L K
Sbjct: 399 LELLKK 404


>gi|241766628|ref|ZP_04764478.1| seryl-tRNA synthetase [Acidovorax delafieldii 2AN]
 gi|241363097|gb|EER58720.1| seryl-tRNA synthetase [Acidovorax delafieldii 2AN]
          Length = 452

 Score = 61.0 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 38/245 (15%), Positives = 84/245 (34%), Gaps = 15/245 (6%)

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDL-FHIAEDGSGVIFWHRKG--WKIFQT 278
           G     +           + E +DH  +   + L F +    SG  F   KG   ++ + 
Sbjct: 134 GNVEVRRWSPDGKGPRTFDFEVKDHVDVGTPLGLDFDMGVKLSGSRFTVMKGQIARLHRA 193

Query: 279 LISYM--RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK---CADDTIKDLRT 333
           L  +M   +  +  Y E   P  ++    + +G    +  ++FA K      + + D   
Sbjct: 194 LSQFMLDVQTQEHGYTECYVPYAVNADSLKGTGQLPKFEGDLFAAKKGGQDGEPVPDNAA 253

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDD 390
             L P +           + +  +LP++L      +R+E         G++R   F + +
Sbjct: 254 LYLIPTSEVPLTNFVRDVVVAEDQLPIKLTAHTPCFRSEAGSYGRDTRGMIRQHQFDKVE 313

Query: 391 AHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAEN 446
                  E+ +    ++     ++ +  G    ++ L T              +W  A+N
Sbjct: 314 MVQIVHPEKSYETLEEMTRHAEAVLQKLGLPYRVMSLCTGDMGFGAAKTYDLEVWLPAQN 373

Query: 447 IMKGV 451
             + +
Sbjct: 374 TYREI 378


>gi|114558189|ref|XP_001148629.1| PREDICTED: hypothetical protein isoform 6 [Pan troglodytes]
          Length = 466

 Score = 61.0 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 57/165 (34%), Gaps = 11/165 (6%)

Query: 271 KGWKIF--QTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
           KG  +F  Q LI Y +R      Y  I TP  + + + Q+      +   ++ V      
Sbjct: 197 KGVLVFLEQALIQYALRTLGSRGYIPIYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGSE 256

Query: 328 IKDLRTFALKP---MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLM 381
             D  ++  K     +     A+         +LP++ A   + +R E         G+ 
Sbjct: 257 KSDDNSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGRDTRGIF 316

Query: 382 RVRGFTQDDAHVFCTKEQ--MFNECLKIHNLIISIYKDFGFEKIM 424
           RV  F + +  V+ +      +    ++       Y+  G    +
Sbjct: 317 RVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHI 361


>gi|15643847|ref|NP_228896.1| histidyl-tRNA synthetase [Thermotoga maritima MSB8]
 gi|7674351|sp|Q9X0H5|SYH_THEMA RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|4981634|gb|AAD36166.1|AE001768_15 histidyl-tRNA synthetase [Thermotoga maritima MSB8]
          Length = 420

 Score = 61.0 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 65/411 (15%), Positives = 129/411 (31%), Gaps = 58/411 (14%)

Query: 276 FQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           ++ +    R   +    EEI TP      L+ +S       +++   +      K  R+ 
Sbjct: 20  WRYVEETFRNVCESAGIEEIRTPIFEQTELFVRS---VGEESDIVQKEMYTFQDKAGRSI 76

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVF 394
            L+P      V  F       R    R    G ++R E   S     R+R F Q      
Sbjct: 77  TLRPEGTAPVVRAFLENSLIDRGFQQRYYYIGPMFRYEKPQS----GRLRQFHQV-GFEI 131

Query: 395 CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST---RPEKRVGSDALWDDAENIMKGV 451
              E    +  ++  L+ +  +  G  K  + L++      ++   +AL +    I+  +
Sbjct: 132 IGPESPKAD-FEVIMLVDTFLRRLGLTKYKIHLNSIGCPVCRKNYREALKEYYGRILDNL 190

Query: 452 LDTIKNSSQDRINTGVLLGEGAFY---GPK-FEYILKDAIGR----------------DW 491
            D  K   +  I   +       Y    PK  +Y+                       + 
Sbjct: 191 CDDCKRRYETNILRLLDCKVDHEYSLNAPKSVDYLCDSCRAHYKKLKEYLNTFEIEYVED 250

Query: 492 QCGTIQVDFNLPSRFNAFYVN------------SHS---EKCHPVMIHRAVFGSIERFIG 536
                 +D+   + F   +                    E     +      G IER I 
Sbjct: 251 HTLVRGLDYYTRTVFEVRHEGLGAQSAIAGGGRYDGLFAELGGSSVPALGFAGGIERIIL 310

Query: 537 IM----IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
            +    IE    N+ L        + T+   A      +A  L+   LS++ D  +  ++
Sbjct: 311 ALKAEGIEIPMKNVHL------VYIATLGEKAFMDGVRLAGELRKKGLSVDVDIMDRKLS 364

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +++  S       +I GD+E  +  + +R   +    ++    A   + +
Sbjct: 365 GQLKHASRMGSRYAVIIGDEELEKGIVILRDLETGDQVEIDRDFAADYIAE 415


>gi|307265411|ref|ZP_07546967.1| seryl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306919525|gb|EFN49743.1| seryl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 423

 Score = 61.0 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 36/234 (15%), Positives = 81/234 (34%), Gaps = 22/234 (9%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHI----AEDGSGVIFWHRKGWKIF 276
           G +     E+ ++    +   E + H ++  E+ +          GS   F+   G ++ 
Sbjct: 114 GDSDEDNVEIRRWGEPRKFDFEPKPHWEIGEELGILDFEAAARVTGSRFTFYKGLGARLE 173

Query: 277 QTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           + LI++M     +   Y E+  P +  +     +G    +  + F V   D        +
Sbjct: 174 RALINFMLDLHIERHGYTEVFPPFMAHRRSMFGTGQLPKFEEDAFKVYGTD--------Y 225

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDA 391
            L P        ++   +    +LP+    + + +R E   +     GL+R   F + + 
Sbjct: 226 FLIPTAEVPVTNMYRDTIIDGDKLPIYHCAYSACFRQEAGSAGRDTRGLIRQHQFNKVEL 285

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALW 441
             F   ++ + E  K+      + +  G    +V + T              +W
Sbjct: 286 VKFTEPDKSYEELEKMTRDAEEVLQALGLPYRVVAICTGDLGFTASKKYDIEVW 339


>gi|262305771|gb|ACY45478.1| glu- + pro-tRNA synthetase [Periplaneta americana]
          Length = 134

 Score = 61.0 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 44/132 (33%), Gaps = 16/132 (12%)

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
           G  Y    E  +  A GR  Q  T        SR     V    E      +++  +G  
Sbjct: 1   GGDYTTTVEAYV-AASGRAIQGATSHFLGQNFSRMFEI-VYEDPETQEKRYVYQNSWGIT 58

Query: 532 ERFIGIMIENFKGNLPLWLSPI----QAIVTT----------ITSSAVEYAQEIANLLKS 577
            R IG+MI     N  L L P     Q ++               + +   +E+   L  
Sbjct: 59  TRTIGVMIMVHADNQGLVLPPRVACFQVVIVPCGINAGMKDEDRKALIANCEELEQALNG 118

Query: 578 HHLSIETDFRNE 589
             + ++ D+R+ 
Sbjct: 119 VGIRVKGDYRDN 130


>gi|328943939|ref|ZP_08241404.1| histidyl-tRNA synthetase [Atopobium vaginae DSM 15829]
 gi|327491908|gb|EGF23682.1| histidyl-tRNA synthetase [Atopobium vaginae DSM 15829]
          Length = 439

 Score = 61.0 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 18/112 (16%), Positives = 46/112 (41%), Gaps = 2/112 (1%)

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
            ER I  +     G  P   +P    V   + +   YA  +   L+   +  E++++  +
Sbjct: 327 FERMILAL--QTFGTQPWKTTPACVYVAFTSDAERMYAFNVCAQLRQAGIRTESNYQGRS 384

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +  + ++       + ++ G+ E   +S+ +R   +    ++ L + +  LT
Sbjct: 385 LKSQFKQADKLGARLCVVIGEHETQNQSVTVRDMQTHEQTEIQLTNLVSQLT 436


>gi|217316819|gb|ACK37815.1| putative glutamyl-prolyl tRNA synthetase [Astacoides betsileoensis]
          Length = 134

 Score = 61.0 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 52/133 (39%), Gaps = 18/133 (13%)

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           GA +    E     A GR  Q  T   +  N    F   + +  +++      ++  +G 
Sbjct: 1   GADFTTTTE-AFISASGRGIQGATSHHLGQNFSKMFEIVFEDPETQQKQ--YCYQNSWGL 57

Query: 531 IERFIGIMIENFKGN----LPLWLSPIQAIVTTIT----------SSAVEYAQEIANLLK 576
             R IG+M+     N    LP W++ +QAI+  +           S+ V+   ++A  L 
Sbjct: 58  TTRTIGVMVMVHGDNKGLVLPPWVASVQAIIMPVGITAKSSEQEKSNLVDACNKLAADLN 117

Query: 577 SHHLSIETDFRNE 589
           +  +    D R+ 
Sbjct: 118 ATGVRARCDLRDN 130


>gi|29349720|ref|NP_813223.1| seryl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
 gi|253569915|ref|ZP_04847324.1| seryl-tRNA synthetase [Bacteroides sp. 1_1_6]
 gi|298383977|ref|ZP_06993538.1| serine--tRNA ligase [Bacteroides sp. 1_1_14]
 gi|29341630|gb|AAO79417.1| seryl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
 gi|251840296|gb|EES68378.1| seryl-tRNA synthetase [Bacteroides sp. 1_1_6]
 gi|298263581|gb|EFI06444.1| serine--tRNA ligase [Bacteroides sp. 1_1_14]
          Length = 424

 Score = 61.0 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 68/198 (34%), Gaps = 16/198 (8%)

Query: 245 DHRKLAREMDLFHIA----EDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQV 299
            H +LA++ DL          G+G   +  KG ++ + LI++ +    K  Y EI  P V
Sbjct: 143 PHWELAKKYDLIDFDLGVKITGAGFPVYKGKGAQLQRALINFFLDEARKSGYTEIMPPTV 202

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           ++            Y       K       ++    L P        ++   +   ++LP
Sbjct: 203 VNA--------ASGYGTGQLPDKEGQMYHCEVDDLYLIPTAEVPVTNIYRDVILEEKQLP 254

Query: 360 VRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +    +   +R E       + GL R+  F++ +       E       ++ + +  + +
Sbjct: 255 IMNCAYTQCFRREAGSYGKDVRGLNRLHEFSKVELVRIDKPEHSKESHQQMLDHVEGLLQ 314

Query: 417 DFGFEKIMVKLSTRPEKR 434
                  +++L       
Sbjct: 315 KLELPYRILRLCGGDMSF 332


>gi|15613814|ref|NP_242117.1| histidyl-tRNA synthetase [Bacillus halodurans C-125]
 gi|20139937|sp|Q9KDG2|SYH_BACHD RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|10173867|dbj|BAB04970.1| histidyl-tRNA synthetase [Bacillus halodurans C-125]
          Length = 428

 Score = 61.0 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 63/414 (15%), Positives = 132/414 (31%), Gaps = 59/414 (14%)

Query: 275 IFQTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           I Q      RR    +Y+EI  P        +          ++   +      +  R+ 
Sbjct: 23  IEQKAYDLCRR---YNYQEIRVPMF---EHTELFLRGVGDTTDIVQKEMYTFEDRGGRSL 76

Query: 335 ALKPMNCPGHVAVF-NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
            L+P         + ++ L      P +L   G ++R E   S     R+R F Q     
Sbjct: 77  TLRPEGTASVTRAYVSNKLYGQANQPTKLFYIGPMFRYERPQS----GRMRQFVQFGVEA 132

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIM--------------VKLSTRPEKRVGSDA 439
             + +   +   ++  L++  Y++ G + +                + +     +     
Sbjct: 133 LGSADPAIDA--EVLALVMRFYEELGLKNLKLVINSLGDTDSRLAHREALVNHFKPRIHE 190

Query: 440 LWDDAENIMKG----VLDTIKNSSQDRINTG-----VLLGEGAFYGPKFEYILKDAIGRD 490
             +D ++ ++     +LD  K+   + + T       L  E   Y  K +  L  A+   
Sbjct: 191 FCNDCQDRLEKNPLRILDCKKDRDHELMGTAPSIHDYLSTESKAYFEKVQSYL-TALNIP 249

Query: 491 WQCGTIQVDFNLPSRFNAFYVNSHSEK--------------------CHPVMIHRAVFGS 530
           +      V         AF V    E                       P         S
Sbjct: 250 FVVDATLVRGLDYYNHTAFEVMVDGEGFGAITTLCGGGRYNGLVEEIGGPETPGIGFALS 309

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
           IER I  +    +   P     I   V T+  +A +   E+   L++  +S E D+ +  
Sbjct: 310 IERAIMAL--EAQQAKPAHNQAIDCYVVTLGEAAKDKGVELVYQLRNAGISAEKDYLDRK 367

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +  +++          +I G+ E +   + ++   +     V+L D +  + ++
Sbjct: 368 MKGQLKAADRLHAKWTVILGEDELAVGKVNVKNMETGEQTDVALTDLVSHMKQQ 421


>gi|127512223|ref|YP_001093420.1| histidyl-tRNA synthetase [Shewanella loihica PV-4]
 gi|166228614|sp|A3QCG3|SYH_SHELP RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|126637518|gb|ABO23161.1| histidyl-tRNA synthetase [Shewanella loihica PV-4]
          Length = 423

 Score = 61.0 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 62/427 (14%), Positives = 129/427 (30%), Gaps = 67/427 (15%)

Query: 269 HRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
                 ++Q L + +R  +    Y EI TP V    L+++S    +          AD  
Sbjct: 15  LPTQSPLWQKLEAVLRDTVAAYGYSEIRTPIVESTDLFKRSIGEVTDIVEKEMYTFAD-- 72

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
            ++     L+P      V   N     Y +   RL   G ++R+E         R R F 
Sbjct: 73  -RNGDLLTLRPEGTASTVRAGNEHGLLYNQ-EQRLWYMGPMFRHERPQK----GRYRQFN 126

Query: 388 QD--DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI-------MVKLSTRPEKRVGSD 438
           Q   + +   + +       ++  +   +++  G  +        +     R   R    
Sbjct: 127 QFGVEVYGIASADIDA----EVLMMSHRLWQKLGISEHVKLELNTLGDAQERAAYRDALV 182

Query: 439 ALWDDAENIMKG------------VLDTIKNSSQDRI-------NTGVLLGEGAFY---- 475
              +  E  +              VLD+     Q  +       +       G F     
Sbjct: 183 EFLEQHEEKLDEDSQRRMYSNPLRVLDSKNPDVQALLGDAPALMDYLGEESRGHFAHLCE 242

Query: 476 -----GPKFEYILKDAIGRDWQCGTI----------QVDFNLPSRFNAFYVNSHSEKCHP 520
                G ++E   +   G D+   T+          Q       R++        +    
Sbjct: 243 LLEAVGIQYEINPRLVRGLDYYNRTVFEWVTDSLGAQGTVLAGGRYDGLVGQLGGKDTPA 302

Query: 521 VMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKS-HH 579
           V     +    ER + +M+E           P+   VT +       A ++A  L+    
Sbjct: 303 VGFAMGL----ERIV-LMLETLAL-TDDVSGPVDVYVTAMGDDCRVAAIKVAQQLREVDG 356

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIP 639
           L + +         +++        + I+ G+ E +   + ++       Q++   D++ 
Sbjct: 357 LKVMSHCGGGNFKKQMKRADKSGAKLAIVIGETELANGQVALKYLREEKEQELVAQDSLA 416

Query: 640 ILTKESL 646
               E +
Sbjct: 417 AYVAELI 423


>gi|317503121|ref|ZP_07961193.1| histidine--tRNA ligase [Prevotella salivae DSM 15606]
 gi|315665771|gb|EFV05366.1| histidine--tRNA ligase [Prevotella salivae DSM 15606]
          Length = 454

 Score = 61.0 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 50/352 (14%), Positives = 113/352 (32%), Gaps = 69/352 (19%)

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
             +   +LP +  +   V+R +         R R F Q DA V  +        +++  +
Sbjct: 113 MHRDELQLPFKRYQIQPVWRADRPQK----GRYREFYQCDADVVGSD--SLLNEVELMQI 166

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRVGS--DA----------------------------- 439
           + +++  FG    +   + +    +    D                              
Sbjct: 167 VDTVFTKFGIRIQIKINNRKILSGIAEVLDEADKIIDITVAIDKLEKIGLENVNAELKAG 226

Query: 440 -LWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPK-FEYI--LKDAIGRDWQCGT 495
            + D+A   ++ +L T++ S++D++ T   + E +  G K  E    + D +        
Sbjct: 227 GITDEAIEKLQPIL-TMQGSNEDKLKTIEKVLESSEVGLKGVEETRFILDTLNSVGLNNE 285

Query: 496 IQVDFNLPSRFNAF----------------------YVNSHSEKCHPVMIHRAVFGSIER 533
           IQ+D  L    N +                      Y N       P +    +    +R
Sbjct: 286 IQLDLTLARGLNYYTGAIFEVKALDTPMGSITGGGRYDNLTGIFGMPGLSGVGISFGADR 345

Query: 534 FIGIM--IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
              ++  +E +   +   LS  Q +          Y       ++   +  E       +
Sbjct: 346 IYDVLNTLELYPKEM---LSSTQVLFINFGEKETAYCLPFIAEIRKSGIRAEIFPDKAKM 402

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
             ++   + K IP ++  G+ E  +  + ++   S   + V+  + I  + K
Sbjct: 403 KRQMNYANAKNIPYVVFAGEDEIEKGKLMLKDMQSGEQKLVTAKELIASVLK 454


>gi|304314183|ref|YP_003849330.1| glycyl-tRNA synthetase [Methanothermobacter marburgensis str.
           Marburg]
 gi|302587642|gb|ADL58017.1| glycyl-tRNA synthetase [Methanothermobacter marburgensis str.
           Marburg]
          Length = 564

 Score = 61.0 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 25/148 (16%), Positives = 50/148 (33%), Gaps = 13/148 (8%)

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI--------ENFKGNLPLWLSPIQAIV 557
           F         EK +P +I       I+R I  ++        +     LP  ++P++  V
Sbjct: 416 FEDVEEVVTGEKVYPHVI--EPSFGIDRIIYTLLLHSLVDEDDRTYFRLPPHVAPVEVSV 473

Query: 558 --TTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEAS 615
                    VE A EI   L+      E D    TI  +        +P  +    +   
Sbjct: 474 FPLVNKKEMVEVALEIKRKLRKSGFIAEFDSSG-TIGRRYARSDEIGVPFAVTVDHETLE 532

Query: 616 ERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           + ++ +R     +  ++ + +    L +
Sbjct: 533 DGTVTLRSRDDCSQIRLKIEELDSKLEE 560



 Score = 57.1 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 64/393 (16%), Positives = 114/393 (29%), Gaps = 83/393 (21%)

Query: 256 FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDS 313
           F I    +G + +   G  +   +++  R     ++ + EI +P ++ +   + SGH D 
Sbjct: 21  FEIYSGVAGFVDYGPLGATLKNKIMNRWREFYVVREGFYEIESPTIMPEEALKASGHVDH 80

Query: 314 YRANMFAVKC-----------ADDTIKDLRTFALKPMNCP-------------------- 342
           +   M   K             D T +D+     + +                       
Sbjct: 81  FNDPMTQCKECMDVYRADHIIEDATGRDVEGLENQELTEIISDEAIRCPRCGGHLTHVWS 140

Query: 343 -------------------------GHVAVFNHGLKSYRE-LPVRLAEFGSVYRNEPSGS 376
                                    G    F   L+ +R  LP  + + G  YRNE S  
Sbjct: 141 YNLMFQTLIGAKGKKTGYLTLDTAQGIFIPFKRLLRFFRNRLPFGVVQLGKSYRNEISPR 200

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKI-----HNLIISIYKDFGFEKIMVKLSTRP 431
             G++R+R FTQ +A +F   E   +            L  +  +  G E   +  +   
Sbjct: 201 -QGVIRLREFTQAEAEIFVNPEDKSHPDFDTVKGDKLRLYSADDQLDGSEPSEMTAAEAV 259

Query: 432 EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP-KFEYILKDAIGRD 490
           EK + S  +      + K  L  I            L  E A Y    ++          
Sbjct: 260 EKGIVSSEILTYHLCLAKRFLTDIGIPEDALRFRQHLPSEMAHYAIDCWDVEAFTDSYGW 319

Query: 491 WQCGTIQVDFNLPSRFNAFYVNSH----SEKCHPVMIHRAVFGSIERFIGIMIENFKGNL 546
            +   I    +   + ++ Y         E   P  I R             ++   G L
Sbjct: 320 IEIIGIADRTDYDLKSHSQYSGEDLRVFIEYEKPKKIKRRA-----------VKPDMGRL 368

Query: 547 PLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH 579
                   A +    S     A E+   L++  
Sbjct: 369 GPRFRKDAARIAQALSEIE--ADEVEKALRNEG 399


>gi|182412822|ref|YP_001817888.1| glycyl-tRNA synthetase [Opitutus terrae PB90-1]
 gi|177840036|gb|ACB74288.1| glycyl-tRNA synthetase [Opitutus terrae PB90-1]
          Length = 509

 Score = 61.0 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 47/350 (13%), Positives = 94/350 (26%), Gaps = 54/350 (15%)

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR-ELPVRLAEFGSVYRNEPS 374
            NM                 L+P    G    F + + + R +LP  +A+ G  +RNE +
Sbjct: 189 FNMMFETYVGPMRDSSAVAYLRPETAQGMFVDFKNVVDTGRVKLPFGIAQIGKSFRNEIT 248

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
              + + R R F Q +   F  ++  + +C +                  +         
Sbjct: 249 PR-NFIFRSREFEQMEMEYFIHEDADWAKCHQ----------------EWIDWCRNWLIS 291

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
           +G         +  K  L    +     I      G    +G         A G      
Sbjct: 292 IGLPESHLSFFSHPKEKL-AFYSKGTVDIMFKYPFGVQELWG-------IAARGNYDLNQ 343

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM----IENFKG------ 544
             Q        F+       S+K     +     G    F+ ++     E+         
Sbjct: 344 HAQASGKSQEYFD-----EPSKKRFVPHVIEPAVGVDRIFLAVLCAAYTEDEAPDEKGKM 398

Query: 545 ------NLPLWLSPIQAIVTT---ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
                  L   ++P++  V           + A+ +   LK              I  + 
Sbjct: 399 EKRIVLKLSPRIAPVKVAVLPLLKNKEQLTQRAKALYAKLKRK--YAAFYDDGGAIGRRY 456

Query: 596 REHSIKKIPIIIICGDKEASE--RSIGIRRFGSTTTQKVSLLDAIPILTK 643
           R       P  +        +   +  +R   S    +++  +   +L +
Sbjct: 457 RRQDEIGTPWCVTIDFDTIEKPGDTFTLRERDSMKQSRITEAELFALLDE 506


>gi|78065554|ref|YP_368323.1| seryl-tRNA synthetase [Burkholderia sp. 383]
 gi|123569084|sp|Q39IN7|SYS_BURS3 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|77966299|gb|ABB07679.1| seryl-tRNA synthetase [Burkholderia sp. 383]
          Length = 433

 Score = 61.0 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 37/243 (15%), Positives = 82/243 (33%), Gaps = 15/243 (6%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDL-FHIAEDGSGVIFWHRKG--WKIFQ 277
           G       E  ++    +   E +DH  +   + L F      +G  F   +G   ++ +
Sbjct: 114 GKDEADNVEARRWGTPRQFDFEVKDHVDVGTPLGLDFETGAKLAGARFTMLRGSIARLHR 173

Query: 278 TLISYMRRK--IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFA 335
            L  +M     ++  Y E  TP +++  +   +G    +  +MF V+   +  K  +   
Sbjct: 174 ALAQFMIDTHTLQHGYTETYTPYIVNPEILYGTGQLPKFADDMFRVEKGGEENKVTQYLI 233

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAH 392
               +           +     LP++L      +R+E         G++R   F + +  
Sbjct: 234 S--TSEISLTNTVRESIVDASALPIKLTAHSPCFRSEAGSYGRDTRGMIRQHQFDKVEMV 291

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG----SDALWDDAENIM 448
                E  +    ++     +I +  G    ++ L T              +W  A+N  
Sbjct: 292 QVVAPEASYAALDEMVGHAEAILQKLGLPYRVITLCTGDMGFSAAKTFDLEVWLPAQNTY 351

Query: 449 KGV 451
           + +
Sbjct: 352 REI 354


>gi|319644298|ref|ZP_07998792.1| alanyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
 gi|317384193|gb|EFV65166.1| alanyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
          Length = 871

 Score = 61.0 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 30/144 (20%), Positives = 58/144 (40%), Gaps = 10/144 (6%)

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDELAQ 121
              + R+     HSC H++ EA++ +        G  +  +   +DF   Q  +  +L +
Sbjct: 550 VDTEKRAACAANHSCTHLLDEALRQVLGTHVEQKGSLVTPESLRFDFSHFQKVTDKQLRE 609

Query: 122 IEKKMQEIIARDSPF-LKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +E  +   I  + P    + L  EKA+EL        K          + V + + G   
Sbjct: 610 VEHLVNAKIRENIPLTEYRNLPIEKAKELGAIALFGEKY--------GDEVRVVQFGNSI 661

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVA 204
           + C G HV +TG++     + + +
Sbjct: 662 EFCGGTHVPATGKIGMVRIISESS 685


>gi|119576775|gb|EAW56371.1| seryl-tRNA synthetase, isoform CRA_g [Homo sapiens]
          Length = 521

 Score = 61.0 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 57/165 (34%), Gaps = 11/165 (6%)

Query: 271 KGWKIF--QTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
           KG  +F  Q LI Y +R      Y  I TP  + + + Q+      +   ++ V      
Sbjct: 204 KGVLVFLEQALIQYALRTLGSRGYIPIYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGSE 263

Query: 328 IKDLRTFALKP---MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLM 381
             D  ++  K     +     A+         +LP++ A   + +R E         G+ 
Sbjct: 264 KSDDNSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGRDTRGIF 323

Query: 382 RVRGFTQDDAHVFCTKEQ--MFNECLKIHNLIISIYKDFGFEKIM 424
           RV  F + +  V+ +      +    ++       Y+  G    +
Sbjct: 324 RVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHI 368


>gi|114320852|ref|YP_742535.1| seryl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
 gi|122311524|sp|Q0A7Z2|SYS_ALHEH RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|114227246|gb|ABI57045.1| seryl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
          Length = 424

 Score = 61.0 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 64/188 (34%), Gaps = 16/188 (8%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + LI +M         Y+EI  P ++++     +G    + A++F +         
Sbjct: 171 ARLHRALIQFMLDTHTAEHGYQEIYVPYMVNRDSLFGTGQLPKFAADLFHLDA------- 223

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFT 387
            + + L P        +    + +  +LP++ A     +R+E         G++R   F 
Sbjct: 224 EQDYYLIPTAEVPVTNMARDEIIADGQLPLKFACHTPCFRSEAGSHGKDTRGMIRQHQFE 283

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E  +     +     +I +       +V L T              +W  
Sbjct: 284 KVELVQMVRPEASWEALEALTGHAETILQRLDLPYRVVTLCTGDLGFSSAKTYDIEVWLP 343

Query: 444 AENIMKGV 451
           A+   + +
Sbjct: 344 AQETYREI 351


>gi|332198542|gb|EGJ12625.1| histidyl-tRNA synthetase [Streptococcus pneumoniae GA41317]
          Length = 429

 Score = 61.0 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 61/404 (15%), Positives = 128/404 (31%), Gaps = 56/404 (13%)

Query: 276 FQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           +Q +  + R   K  +Y E+ TP       ++          ++   +  D   K  R  
Sbjct: 20  WQYVEGFAREIFKRYNYAEVRTPIF---EHYEVISRSVGDTTDIVTKEMYDFYDKGDRHI 76

Query: 335 ALKPMNCPGHVAVFNHGLKS-----YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
            L+P    G   V    +++       + P +    G ++R E   +     R+R F Q 
Sbjct: 77  TLRP---EGTAPVVRSYVENKLFAPEVQKPSKFYYMGPMFRYERPQA----GRLRQFHQI 129

Query: 390 DAHVFCTKEQMFN-ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWD------ 442
               F +     + E + +    +      G +  +  L     +     AL D      
Sbjct: 130 GVECFGSSNPAIDVETIAMAAHFLKEIGIQGVKLHLNTLGNPESRAAYRQALIDYLTPLK 189

Query: 443 -----DAENIMKG----VLDTIKNSSQDR-------INTGVLLGEGAFYGPK-------F 479
                D++  ++     VLD+ +   +         ++      +  F   +        
Sbjct: 190 ETLSKDSQRRLEENPLRVLDSKEKEDKVAVENAPSILDFLDEESQTHFDAVRQMLENLGV 249

Query: 480 EYILKDAI--GRDWQCGTIQVDFNLPSRFNAFYVN---SHSEKCHPVMIHRAVFG---SI 531
           +YI+   +  G D+   TI          +              +      A FG    +
Sbjct: 250 DYIIDTNMVRGLDYYNHTIFEFITEIEGNDLTVCAGGRYDGLVAYFGGPETAGFGFGLGV 309

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           ER + I+    +G      + +   +  +   A   A E+   L+      E D+ N  +
Sbjct: 310 ERLLLIL--EKQGVALPIENALDVYIAVLGDGANVKALELVQALRQQGFKAERDYLNRKL 367

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
             + +   +     +I  G+ E   R + ++   +    +VSL 
Sbjct: 368 KAQFKSADVFAAKTLITLGESEVESRQVTVKNNQTREEVQVSLE 411


>gi|325567669|ref|ZP_08144336.1| serine--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
 gi|325159102|gb|EGC71248.1| serine--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
          Length = 425

 Score = 61.0 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 32/223 (14%), Positives = 79/223 (35%), Gaps = 21/223 (9%)

Query: 242 EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRRK--IKDDYEEIN 295
           E + H ++A ++ +          GS  +++   G ++ + L ++M  +   +  Y E+ 
Sbjct: 136 EPKPHWEIAEDLGILDFERGAKVSGSRFVYYKGLGARLERALYNFMLDQHVYEHGYTEMI 195

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP +++      +G +  ++ ++F +   D T+         P         +   +   
Sbjct: 196 TPYIVNSQAMFGTGQFPKFKEDVFQLADTDLTLI--------PTAEVPLTNYYQGEILEQ 247

Query: 356 RELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
            +LP         +R+E   +     GL+R+  F + +   F   E  + E  K+     
Sbjct: 248 EQLPAYFTALSPSFRSEAGSAGRDTRGLIRLHQFNKVEMVKFSDAEHSYEELEKMTANAE 307

Query: 413 SIYKDFGFEKI----MVKLSTRPEKRVGSDALWDDAENIMKGV 451
            I +                     +     +W  A+ + + +
Sbjct: 308 DILQKLNLPYRVLSLCTGDMGFSAAKTYDLEVWIPAQEMYREI 350


>gi|224369825|ref|YP_002603989.1| alanyl-tRNA synthetase [Desulfobacterium autotrophicum HRM2]
 gi|223692542|gb|ACN15825.1| AlaS1 [Desulfobacterium autotrophicum HRM2]
          Length = 872

 Score = 61.0 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 21/145 (14%), Positives = 55/145 (37%), Gaps = 8/145 (5%)

Query: 55  REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQP 113
            + ++ ++  ++ R+   + H+  H++  A++ +  +     G  + +D   +DF     
Sbjct: 545 TKANVLMVVDQEQRAATAMNHTATHLLHAALRKVLGDHVKQSGSLVTKDRLRFDFTHFAA 604

Query: 114 FSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTL 173
            +  E+  +E ++   I  + P     +  ++A +            + E         +
Sbjct: 605 ITRQEIEAVESEVNLRIRENVPVATIEMDMDEAVKSGA-------TALFEEKYGDRVRVV 657

Query: 174 YRQGEWFDLCRGPHVRSTGQVKKFF 198
              G   +LC G H   +G +  F 
Sbjct: 658 SMAGFSKELCGGTHTDRSGNIGLFQ 682


>gi|114558181|ref|XP_001148144.1| PREDICTED: seryl-tRNA synthetase isoform 2 [Pan troglodytes]
          Length = 521

 Score = 61.0 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 57/165 (34%), Gaps = 11/165 (6%)

Query: 271 KGWKIF--QTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
           KG  +F  Q LI Y +R      Y  I TP  + + + Q+      +   ++ V      
Sbjct: 204 KGVLVFLEQALIQYALRTLGSRGYIPIYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGSE 263

Query: 328 IKDLRTFALKP---MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLM 381
             D  ++  K     +     A+         +LP++ A   + +R E         G+ 
Sbjct: 264 KSDDNSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGRDTRGIF 323

Query: 382 RVRGFTQDDAHVFCTKEQ--MFNECLKIHNLIISIYKDFGFEKIM 424
           RV  F + +  V+ +      +    ++       Y+  G    +
Sbjct: 324 RVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHI 368


>gi|34540153|ref|NP_904632.1| seryl-tRNA synthetase [Porphyromonas gingivalis W83]
 gi|34396465|gb|AAQ65531.1| seryl-tRNA synthetase [Porphyromonas gingivalis W83]
          Length = 423

 Score = 61.0 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 69/202 (34%), Gaps = 16/202 (7%)

Query: 241 SEKRDHRKLAREMDLFHIA----EDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEIN 295
           + K  H  LA++ DL          G+G   +  KG ++ + L+++ +       + EI 
Sbjct: 138 THKLPHWDLAKKYDLIDFELGVKITGAGFPVYKGKGARLQRALVNFFLDEARNAGFTEIE 197

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
            P V+++           Y       K             L P        +F   + S 
Sbjct: 198 PPYVVNEDS--------GYGTGQLPDKEGQMYHVTADNLYLIPTAEVPVTNIFRDVILSE 249

Query: 356 RELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
            ELP+ L  + + +R E       + GL R+  F + +       E  + +  ++   + 
Sbjct: 250 DELPILLTAYSACFRREAGSYGKDVRGLNRLHQFNKVEIVCIDKPEHSYEQLDQMVGYVQ 309

Query: 413 SIYKDFGFEKIMVKLSTRPEKR 434
            +    G    +++L       
Sbjct: 310 GLVDKLGLPWRILRLCGGDISF 331


>gi|289450565|ref|YP_003475604.1| alanine--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5]
 gi|289185112|gb|ADC91537.1| alanine--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5]
          Length = 886

 Score = 61.0 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 25/129 (19%), Positives = 55/129 (42%), Gaps = 10/129 (7%)

Query: 72  VIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDELAQIEKKMQEII 130
           +  HS  H++ +A++++        G  +  +   +DF   +P +++EL QIE ++   I
Sbjct: 570 MRNHSATHLLHKALRTVLGTHVTQAGSLVNAEHLRFDFHHMKPCTAEELRQIEAEVNRAI 629

Query: 131 ARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVR 189
             +   + + +   +A++         K          + V +   G++  + C G H+ 
Sbjct: 630 LANYQSVTEVMPMAEAKKKGAMALFDEKY--------GDMVRVVSMGDYSVEFCGGTHLS 681

Query: 190 STGQVKKFF 198
            T QV  F 
Sbjct: 682 ETSQVGIFH 690


>gi|288927731|ref|ZP_06421578.1| histidine--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108]
 gi|288330565|gb|EFC69149.1| histidine--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108]
          Length = 456

 Score = 61.0 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 41/90 (45%)

Query: 553 IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
            + +      +  +Y   IA+ +++  +S+E       +  ++   + K IP +++ G+ 
Sbjct: 363 TEVLFINFGETESDYCLPIASQVRAAGISVELYPDCAKMKKQMAYANAKGIPFVVLAGES 422

Query: 613 EASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           E S+  + ++   +   Q VS  + I  +T
Sbjct: 423 EISQGKVTLKNMLTGDQQLVSAEELIAKIT 452


>gi|254882808|ref|ZP_05255518.1| alanyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
 gi|254835601|gb|EET15910.1| alanyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
          Length = 872

 Score = 61.0 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 30/144 (20%), Positives = 58/144 (40%), Gaps = 10/144 (6%)

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDELAQ 121
              + R+     HSC H++ EA++ +        G  +  +   +DF   Q  +  +L +
Sbjct: 551 VDTEKRAACAANHSCTHLLDEALRQVLGTHVEQKGSLVTPESLRFDFSHFQKVTDKQLRE 610

Query: 122 IEKKMQEIIARDSPF-LKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +E  +   I  + P    + L  EKA+EL        K          + V + + G   
Sbjct: 611 VEHLVNAKIRENIPLTEYRNLPIEKAKELGAIALFGEKY--------GDEVRVVQFGNSI 662

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVA 204
           + C G HV +TG++     + + +
Sbjct: 663 EFCGGTHVPATGKIGMVRIISESS 686


>gi|237708798|ref|ZP_04539279.1| LOW QUALITY PROTEIN: alanyl-tRNA synthetase [Bacteroides sp.
           9_1_42FAA]
 gi|229457224|gb|EEO62945.1| LOW QUALITY PROTEIN: alanyl-tRNA synthetase [Bacteroides sp.
           9_1_42FAA]
          Length = 465

 Score = 61.0 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 30/144 (20%), Positives = 59/144 (40%), Gaps = 10/144 (6%)

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDELAQ 121
              + R+     HSC H++ EA++ +        G  +  +   +DF   Q  + ++L +
Sbjct: 144 VDTEKRAACAANHSCTHLLDEALRQVLGTHVEQKGSLVTPESLRFDFSHFQKVTDEQLRE 203

Query: 122 IEKKMQEIIARDSPF-LKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +E  +   I  + P    + L  EKA+EL        K          + V + + G   
Sbjct: 204 VEHLVNAKIRENIPLTEYRNLPIEKAKELGAIALFGEKY--------GDEVRVVQFGNSI 255

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVA 204
           + C G HV +TG++     + + +
Sbjct: 256 EFCGGTHVSATGKIGMVRIISESS 279


>gi|167037465|ref|YP_001665043.1| alanyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|167040127|ref|YP_001663112.1| alanyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|300914211|ref|ZP_07131527.1| alanyl-tRNA synthetase [Thermoanaerobacter sp. X561]
 gi|307724554|ref|YP_003904305.1| alanyl-tRNA synthetase [Thermoanaerobacter sp. X513]
 gi|320115879|ref|YP_004186038.1| alanyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
 gi|205830277|sp|B0K994|SYA_THEP3 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|205830278|sp|B0K0Q1|SYA_THEPX RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|166854367|gb|ABY92776.1| alanyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|166856299|gb|ABY94707.1| alanyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|300889146|gb|EFK84292.1| alanyl-tRNA synthetase [Thermoanaerobacter sp. X561]
 gi|307581615|gb|ADN55014.1| alanyl-tRNA synthetase [Thermoanaerobacter sp. X513]
 gi|319928970|gb|ADV79655.1| alanyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
          Length = 877

 Score = 61.0 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 61/139 (43%), Gaps = 10/139 (7%)

Query: 67  PRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDELAQIEKK 125
            R  A   H+  H++ +A++ I  +     G  + +D   +DF   Q  + +EL QIE +
Sbjct: 555 SRRNAARNHTATHLLHKALKEILGDHVHQAGSLVADDRLRFDFSHYQAVTKEELKQIENR 614

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCR 184
           + E I +      +  ++++A +         K          + V + +  ++  +LC 
Sbjct: 615 VNEKIYQSLNVHIEEKTYDEAVKEGAVALFTEKY--------GDKVRVVKIDDYSMELCG 666

Query: 185 GPHVRSTGQVKKFFKLMKV 203
           G HV++T ++  F  + + 
Sbjct: 667 GTHVKNTNEIGIFKIVSES 685


>gi|315645820|ref|ZP_07898941.1| alanyl-tRNA synthetase [Paenibacillus vortex V453]
 gi|315278581|gb|EFU41895.1| alanyl-tRNA synthetase [Paenibacillus vortex V453]
          Length = 875

 Score = 61.0 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 69/170 (40%), Gaps = 10/170 (5%)

Query: 32  RSLAKKAVAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPE 91
             L K      ++    +L +     ++        R+  V  H+  H++ +A++ +  +
Sbjct: 520 EGLFKAPHGQHVHFVTVELGELKVGDTVTAQVNASMRNDIVKNHTATHLLHKALKEVLGD 579

Query: 92  VQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELF 150
                G ++E     +DF      + +EL  IE+++ E + +  P + +    ++A+ + 
Sbjct: 580 HVNQAGSLVEPQRLRFDFSHFGSITQEELGDIERRVNEQVWKSIPVVIERKGIDEAKAMG 639

Query: 151 ESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKFFK 199
                  K          + V + + G++  +LC G HV +T Q+  F  
Sbjct: 640 AMALFGEKY--------GDIVRVVQVGDYSIELCGGCHVGNTSQIGIFKL 681


>gi|291398355|ref|XP_002715855.1| PREDICTED: seryl-tRNA synthetase isoform 2 [Oryctolagus cuniculus]
          Length = 514

 Score = 61.0 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 57/165 (34%), Gaps = 11/165 (6%)

Query: 271 KGWKIF--QTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
           KG  +F  Q LI Y +R      Y  I TP  + + + Q+      +   ++ V      
Sbjct: 197 KGVLVFLEQALIQYALRTLRNRGYTPIYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGSE 256

Query: 328 IKDLRTFALKP---MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLM 381
             D  ++  K     +     A+         +LP++ A   + +R E         G+ 
Sbjct: 257 KSDDNSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGRDTRGIF 316

Query: 382 RVRGFTQDDAHVFCTKEQ--MFNECLKIHNLIISIYKDFGFEKIM 424
           RV  F + +  V+ +      +    ++       Y+  G    +
Sbjct: 317 RVHQFEKIEQFVYSSPHDNKSWEMFEEMIATAEEFYQSLGIPYHI 361


>gi|146302779|ref|YP_001197370.1| histidyl-tRNA synthetase [Flavobacterium johnsoniae UW101]
 gi|189082295|sp|A5F9R5|SYH_FLAJO RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|146157197|gb|ABQ08051.1| histidyl-tRNA synthetase [Flavobacterium johnsoniae UW101]
          Length = 475

 Score = 61.0 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 52/350 (14%), Positives = 105/350 (30%), Gaps = 66/350 (18%)

Query: 351 GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
             +S  E P +  +   V+R +         R R F Q DA V  +K     + +++  L
Sbjct: 131 QHQSEIEFPFKRYQIQPVWRADNPQK----GRFREFFQCDADVVGSK--SLWQEVELVQL 184

Query: 411 IISIYKDFGFEKIMVKLSTRPEKR----------------VGSDALWDDAENIMKGVLDT 454
             +++   G E + +K++ R                    V  D L    E+ +K  +  
Sbjct: 185 YDTVFTSLGLEGVTIKINNRKILSGIAEVIGASDKLIDFTVALDKLDKIGEDGVKKEMIE 244

Query: 455 IKNSSQDRINTGVLLGEGAFYGPKF--------------------EYILKDAIGRDWQCG 494
              S    +    L      +  K                     ++I  +         
Sbjct: 245 KGISEDALVKVQPLFNFSGTFADKIAQLSDLLSSSEEGMKGVEELKFICDNVADLGLSTA 304

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF-------------------- 534
            + +D  L    N +Y  +  E   P  +     G   R+                    
Sbjct: 305 VLDLDVTLARGLN-YYTGAIFEVAAPKTVAMGSIGGGGRYDDLTGIFGLKNMSGVGISFG 363

Query: 535 ---IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
              I +++E  +       +  +AI          YA +    L+  ++ +E    N  +
Sbjct: 364 LDRIYLVLEELQLFPETVAATSKAIFLNFGDKEALYASKAIQKLRQENIKVELYPDNVKV 423

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
             + +    + IP  ++ GD+E +  S  ++   +     V        L
Sbjct: 424 GKQFQYADKRLIPFAVLVGDQEINSNSYALKNLVTGEQVSVDFEGLKKTL 473


>gi|116199279|ref|XP_001225451.1| hypothetical protein CHGG_07795 [Chaetomium globosum CBS 148.51]
 gi|88179074|gb|EAQ86542.1| hypothetical protein CHGG_07795 [Chaetomium globosum CBS 148.51]
          Length = 608

 Score = 61.0 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 28/181 (15%), Positives = 64/181 (35%), Gaps = 13/181 (7%)

Query: 276 FQTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           F+ +I+Y +      +Y  + TPQ++ +    ++     +   ++ V        D    
Sbjct: 338 FRAIINYGLEFLHDREYVPLQTPQLMLRDQMAKTAQLSQFDEELYKVT------GDQADK 391

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDA 391
            L   +     A  +      +ELP++ A + + +R E       + G+ RV  FT+ + 
Sbjct: 392 YLIATSEQPISAYHSDEWLQPKELPLKYAGYSTCFRKEAGAHGKDVWGIFRVHEFTKVEQ 451

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
                 E+ +     + +     YK  G    +   +   +        W   +   K +
Sbjct: 452 FCITDPEKSWEMFENMISTSEDFYKSLGIPHHLPDNAAAKKL---DLEAWFPHQGEFKEL 508

Query: 452 L 452
           +
Sbjct: 509 V 509


>gi|321441349|gb|ADW85089.1| glu- + pro-tRNA synthetase [Zeuzera coffeae]
          Length = 134

 Score = 61.0 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 32/133 (24%), Positives = 58/133 (43%), Gaps = 18/133 (13%)

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           G  Y    E  +  A GR  Q  T   +  N    F+  Y +  +++     +++  +G 
Sbjct: 1   GGDYTTTVEGYIP-ASGRGIQGATSHFLGQNFSKMFDIIYDDPETQEKK--YVYQTSWGL 57

Query: 531 IERFIGIMI----ENFKGNLPLWLSPIQAIVTT----ITSSAVEYAQ------EIANLLK 576
             R IG+MI    ++    LP  ++ IQAIV       +SSA + A+      ++   LK
Sbjct: 58  TTRTIGVMILVHGDDRGLVLPPRIAEIQAIVVPCGITASSSAEDRAKLTAACEQLVAELK 117

Query: 577 SHHLSIETDFRNE 589
           +  +  + D+R+ 
Sbjct: 118 AAGIRADGDYRDN 130


>gi|228475643|ref|ZP_04060361.1| serine--tRNA ligase [Staphylococcus hominis SK119]
 gi|314935208|ref|ZP_07842561.1| serine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
 gi|228270425|gb|EEK11860.1| serine--tRNA ligase [Staphylococcus hominis SK119]
 gi|313656543|gb|EFS20282.1| serine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
          Length = 427

 Score = 61.0 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 40/251 (15%), Positives = 84/251 (33%), Gaps = 26/251 (10%)

Query: 210 GDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWH 269
            D+    L + +GT      E   +   +EE +  D  + A+      +           
Sbjct: 117 DDTENVELKK-WGTPREFDFEPKAHWDLVEELKMADFERAAKVSGARFVYLTK------- 168

Query: 270 RKGWKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
             G  + + L++YM  K   +  Y E+ TPQ+++      +G    +  ++F V      
Sbjct: 169 -DGALLERALMNYMLTKHTTQHGYTEMMTPQLVNADTMFGTGQLPKFEEDLFKV------ 221

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVR 384
             +       P         + + +     LP +     + +R+E   +     GL+R+ 
Sbjct: 222 --EKEGLYTIPTAEVPLTNFYRNEIIQPDVLPEKFTGQTACFRSEAGSAGRDTRGLIRLH 279

Query: 385 GFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDAL 440
            F + +   F   E  ++    +     +I ++       V L T              +
Sbjct: 280 QFDKVEMVRFEKPEDSWDALEDMTQNAEAILEELKLPYRRVNLCTGDIGFSASKTYDLEV 339

Query: 441 WDDAENIMKGV 451
           W  + N  K +
Sbjct: 340 WLPSYNDYKEI 350


>gi|88602971|ref|YP_503149.1| glycyl-tRNA synthetase [Methanospirillum hungatei JF-1]
 gi|88188433|gb|ABD41430.1| glycyl-tRNA synthetase [Methanospirillum hungatei JF-1]
          Length = 572

 Score = 61.0 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 54/154 (35%), Gaps = 20/154 (12%)

Query: 507 NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK------------GNLPLWLSPIQ 554
               V+       P +I    +G I+R I  ++E+                 P  ++P+Q
Sbjct: 413 KEEEVDVRGVDVRPHVIE-PSYG-IDRMIYAVLEHSYFEEEVEGEVRKVMRFPSRVAPVQ 470

Query: 555 AIVTTIT--SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
             +  +         A+EIA  L+   +  E D     I  + R       P  +     
Sbjct: 471 VAIFPLMARDGLDVMAKEIARTLQMQGILAEYDDSGA-IGRRYRRQDEIGTPFAVTVDYD 529

Query: 613 EASERSIGIRRFGSTTTQKVS---LLDAIPILTK 643
              ++++ +R   S    ++    L+D IP L +
Sbjct: 530 SLEDQTVTLRDRDSMQQVRIPKDQLVDLIPALIR 563



 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/85 (29%), Positives = 36/85 (42%), Gaps = 2/85 (2%)

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRE-LPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
               R   L+P    G    F   L+ YR+ LP    + G  YRNE S    G++R+R F
Sbjct: 152 PGSQRKGYLRPETAQGIFVDFGRLLRFYRDKLPFGTVQIGRSYRNEISPR-QGMIRLREF 210

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLI 411
           TQ +A +F   E   +     +   
Sbjct: 211 TQAEAEIFVHPEMKDHPNFARYADY 235


>gi|14424755|gb|AAH09390.1| Seryl-tRNA synthetase [Homo sapiens]
          Length = 514

 Score = 61.0 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 57/165 (34%), Gaps = 11/165 (6%)

Query: 271 KGWKIF--QTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
           KG  +F  Q LI Y +R      Y  I TP  + + + Q+      +   ++ V      
Sbjct: 197 KGVLVFLEQALIQYALRTLGSRGYIPIYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGSE 256

Query: 328 IKDLRTFALKP---MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLM 381
             D  ++  K     +     A+         +LP++ A   + +R E         G+ 
Sbjct: 257 KSDDNSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGRDTRGIF 316

Query: 382 RVRGFTQDDAHVFCTKEQ--MFNECLKIHNLIISIYKDFGFEKIM 424
           RV  F + +  V+ +      +    ++       Y+  G    +
Sbjct: 317 RVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHI 361


>gi|78044932|ref|YP_359396.1| alanyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901]
 gi|123576855|sp|Q3AEN8|SYA_CARHZ RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|77997047|gb|ABB15946.1| alanyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901]
          Length = 874

 Score = 61.0 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 68/154 (44%), Gaps = 11/154 (7%)

Query: 46  KVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGF 104
           KV + S  V + +  ++  E  R      H+  H++ +A++ +  E     G  +  +  
Sbjct: 536 KVVEGSVKVGDKA-TLMVDETTRMSTARNHTATHLLHKALKMVLGEHVNQAGSLVTPERL 594

Query: 105 YYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES 164
            +DF   +  S ++L +IE  + E I R+      Y + ++AR+          V  L  
Sbjct: 595 RFDFTHFEGVSDEDLRKIENIVNEAILRNLLVQIDYTTLDEARKAG--------VIALFD 646

Query: 165 IPAKENVTLYRQGEWF-DLCRGPHVRSTGQVKKF 197
               + V + + GE+  +LC G HV STG +  F
Sbjct: 647 EKYGDLVRVVKIGEFSAELCGGTHVSSTGVIGFF 680


>gi|325298627|ref|YP_004258544.1| alanyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
 gi|324318180|gb|ADY36071.1| alanyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
          Length = 872

 Score = 61.0 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 32/144 (22%), Positives = 59/144 (40%), Gaps = 10/144 (6%)

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDELAQ 121
              D R+     HSC H++ EA++ +        G  +  +   +DF   Q  + ++L +
Sbjct: 551 VDTDKRAACAANHSCTHLLDEALRQVLGTHVEQKGSLVTPESLRFDFSHFQKVTPEQLRE 610

Query: 122 IEKKMQEIIARDSPF-LKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +E  +   I  + P    + L  EKA+EL        K          + V + + G   
Sbjct: 611 VEHLVNAKIRENVPLTEYRNLPIEKAKELGAIALFGEKY--------GDEVRVVQFGSSI 662

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVA 204
           + C G HV +TG++     L + +
Sbjct: 663 EFCGGTHVSATGKIGMVKILSESS 686


>gi|292670501|ref|ZP_06603927.1| serine-tRNA ligase [Selenomonas noxia ATCC 43541]
 gi|292647911|gb|EFF65883.1| serine-tRNA ligase [Selenomonas noxia ATCC 43541]
          Length = 423

 Score = 61.0 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 70/196 (35%), Gaps = 17/196 (8%)

Query: 265 VIFWHRKGWKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK 322
            +F+   G ++ +  I++M     +   Y E+  P ++++     +G    +  +MF + 
Sbjct: 162 FMFYKGLGARLERACINFMMDLHAEKHGYTEMLAPYIVNEDSMIGTGQLPKFAEDMFKL- 220

Query: 323 CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHG 379
                  D   + L P             +    +LP     + + +R E   +     G
Sbjct: 221 -------DGLDYYLVPTAEVPTTNYHRDEILEAEQLPEYYTSYTACFRAEAGSAGRDTRG 273

Query: 380 LMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----V 435
           L+R   F + +   F T E  ++E  ++      + K       +++L T          
Sbjct: 274 LIRQHQFNKVELIKFVTPETSWDELERMVEAAEDVLKILELPYRVIQLCTGDMSFTSAKT 333

Query: 436 GSDALWDDAENIMKGV 451
               +W  A+N  + +
Sbjct: 334 YDLEVWMPAQNKYREI 349


>gi|225861939|ref|YP_002743448.1| histidyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
 gi|298230974|ref|ZP_06964655.1| histidyl-tRNA synthetase [Streptococcus pneumoniae str. Canada
           MDR_19F]
 gi|298254103|ref|ZP_06977689.1| histidyl-tRNA synthetase [Streptococcus pneumoniae str. Canada
           MDR_19A]
 gi|298501624|ref|YP_003723564.1| histidine--tRNA ligase [Streptococcus pneumoniae TCH8431/19A]
 gi|254782352|sp|C1CU26|SYH_STRZT RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|225726465|gb|ACO22316.1| histidyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
 gi|298237219|gb|ADI68350.1| histidine--tRNA ligase [Streptococcus pneumoniae TCH8431/19A]
 gi|327388859|gb|EGE87207.1| histidyl-tRNA synthetase [Streptococcus pneumoniae GA04375]
          Length = 429

 Score = 61.0 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 60/404 (14%), Positives = 126/404 (31%), Gaps = 56/404 (13%)

Query: 276 FQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           +Q +  + R   K  +Y E+ TP       ++          ++   +  D   K  R  
Sbjct: 20  WQYVEGFAREIFKRYNYAEVRTPIF---EHYEVISRSVGDTTDIVTKEMYDFYDKGDRHI 76

Query: 335 ALKPMNCPGHVAVFNHGLKS-----YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
            L+P    G   V    +++       + P +    G ++R E   +     R+R F Q 
Sbjct: 77  TLRP---EGTAPVVRSYVENKLFAPEVQKPSKFYYMGPMFRYERPQA----GRLRQFHQI 129

Query: 390 DAHVFCTKEQM-FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWD------ 442
               F +       E + +    +      G +  +  L     +     AL D      
Sbjct: 130 GVECFGSSNPATDVETIVMAAHFLKEIGIQGVKLHLNTLGNPESRAAYRQALIDYLTPLK 189

Query: 443 -----DAENIMKG----VLDTIKNSSQDR-------INTGVLLGEGAFYGPK-------F 479
                D++  ++     VLD+ +   +         ++      +  F   +        
Sbjct: 190 ETLSKDSQRRLEENPLRVLDSKEKEDKVAVENAPSILDFLDEESQTHFDAVRQMLENLGV 249

Query: 480 EYILKDAI--GRDWQCGTIQVDFNLPSRFNAFYVN---SHSEKCHPVMIHRAVFG---SI 531
           +YI+   +  G D+   TI          +              +      A FG    +
Sbjct: 250 DYIIDTNMVRGLDYYNHTIFEFITEIEGNDLTVCAGGRYDGLVAYFGGPETAGFGFGLGV 309

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           ER + I+    +G      + +   +  +   A   A E+   L+      E D+ N  +
Sbjct: 310 ERLLLIL--EKQGVALPIENALDVYIAVLGDGANVKALELVQALRQQGFKAERDYLNRKL 367

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
             + +   +     +I  G+ E     + ++   +    +VSL 
Sbjct: 368 KAQFKSADVFAAKTLITLGESEVESGQVTVKNNQTREEVQVSLE 411


>gi|111494145|gb|AAI11399.1| SARS protein [Homo sapiens]
          Length = 511

 Score = 61.0 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 57/165 (34%), Gaps = 11/165 (6%)

Query: 271 KGWKIF--QTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
           KG  +F  Q LI Y +R      Y  I TP  + + + Q+      +   ++ V      
Sbjct: 197 KGVLVFLEQALIQYALRTLGSRGYIPIYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGSE 256

Query: 328 IKDLRTFALKP---MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLM 381
             D  ++  K     +     A+         +LP++ A   + +R E         G+ 
Sbjct: 257 KSDDNSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGRDTRGIF 316

Query: 382 RVRGFTQDDAHVFCTKEQ--MFNECLKIHNLIISIYKDFGFEKIM 424
           RV  F + +  V+ +      +    ++       Y+  G    +
Sbjct: 317 RVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHI 361


>gi|229496595|ref|ZP_04390309.1| alanyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406]
 gi|229316492|gb|EEN82411.1| alanyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406]
          Length = 873

 Score = 61.0 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 60/143 (41%), Gaps = 10/143 (6%)

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSDELAQI 122
            ++ R +A   H+  H++ +A++ +  E     G  +      +DF      + +E+ Q+
Sbjct: 550 DQERRRMAEANHTATHLLHQALRMVLGEHVEQKGSFVSPEVLRFDFSHYNKLTPEEIRQV 609

Query: 123 EKKMQEIIARDSP-FLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           E+ + + +  D P    + +   +AR +        K          E V + + G   +
Sbjct: 610 EELVTQAVRADYPREEHRNIPIAEARAMGAMALFGEKY--------GEEVRVMKYGTSIE 661

Query: 182 LCRGPHVRSTGQVKKFFKLMKVA 204
           LC G HV STG +  F  + + +
Sbjct: 662 LCGGTHVPSTGMIGAFRIVSESS 684


>gi|188995510|ref|YP_001929762.1| seryl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277]
 gi|188595190|dbj|BAG34165.1| seryl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277]
          Length = 423

 Score = 61.0 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 69/202 (34%), Gaps = 16/202 (7%)

Query: 241 SEKRDHRKLAREMDLFHIA----EDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEIN 295
           + K  H  LA++ DL          G+G   +  KG ++ + L+++ +       + EI 
Sbjct: 138 THKLPHWDLAKKYDLIDFELGVKITGAGFPVYKGKGARLQRALVNFFLDEARNAGFTEIE 197

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
            P V+++           Y       K             L P        +F   + S 
Sbjct: 198 PPYVVNEDS--------GYGTGQLPDKEGQMYHVTADNLYLIPTAEVPVTNIFRDVILSE 249

Query: 356 RELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
            ELP+ L  + + +R E       + GL R+  F + +       E  + +  ++   + 
Sbjct: 250 DELPILLTAYSACFRREAGSYGKDVRGLNRLHQFNKVEIVCIDKPEHSYEQLDQMVGYVQ 309

Query: 413 SIYKDFGFEKIMVKLSTRPEKR 434
            +    G    +++L       
Sbjct: 310 GLVDKLGLPWRILRLCGGDISF 331


>gi|123456416|ref|XP_001315944.1| Phosphoribulokinase / Uridine kinase family protein [Trichomonas
           vaginalis G3]
 gi|121898636|gb|EAY03721.1| Phosphoribulokinase / Uridine kinase family protein [Trichomonas
           vaginalis G3]
          Length = 526

 Score = 61.0 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 31/142 (21%), Positives = 66/142 (46%), Gaps = 9/142 (6%)

Query: 49  DLSD-PVREGSIEIITPEDP---RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGF 104
           DL++ P+     +I  P D    R+  + RH+  + +  ++        + I   + DGF
Sbjct: 11  DLTEFPLE----KIHDPRDEKVTRTQLLSRHATVNFLITSIYRKLFNRLLRIEHSLGDGF 66

Query: 105 YYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES 164
           Y+  +   P + +++AQ+EK++  I   ++P     L  E+  + F  +    K+ +L++
Sbjct: 67  YFMDNSGVPITEEQIAQLEKELHAIFQSETPIELTTLPREEVIKYFSQQGLQDKLGVLKA 126

Query: 165 IPAKENVTLYRQGEWFDLCRGP 186
                N+ + + GE+ D    P
Sbjct: 127 W-QDANIPVIKCGEFMDYVIEP 147


>gi|304319796|ref|YP_003853439.1| seryl-tRNA synthetase [Parvularcula bermudensis HTCC2503]
 gi|303298699|gb|ADM08298.1| seryl-tRNA synthetase [Parvularcula bermudensis HTCC2503]
          Length = 425

 Score = 61.0 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 37/245 (15%), Positives = 82/245 (33%), Gaps = 22/245 (8%)

Query: 220 IYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKG--WKI 275
             G + +   E+ ++    + +  +DH  L   +    F  A   SG  F    G   ++
Sbjct: 114 PDGESEDDNVEIRRWGTPPDIATPQDHVDLGEGLGQMDFETAAKISGSRFALLTGDLARL 173

Query: 276 FQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
            + L ++M    +    Y E++ P ++       +G    +  ++F              
Sbjct: 174 ERALATFMLDLHRHEFGYIEVSPPVLVRDDALVGTGQLPKFEEDLFKTTSGH-------- 225

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDD 390
             L P        +    L     LP R   +   +R+E   +     G++R+  F++ +
Sbjct: 226 -YLTPTAEVPLTNLVRDSLLEEDSLPRRYTAYTPCFRSEAGSAGRDTRGMIRLHQFSKVE 284

Query: 391 AHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAEN 446
                T E+   E  ++     ++ +       +V L                +W  A+N
Sbjct: 285 LVSITTPEEGHQEHERMTQAAETVLQRLDLPYRVVTLCAGDIGFGALKTYDLEVWLPAQN 344

Query: 447 IMKGV 451
             + +
Sbjct: 345 TYREI 349


>gi|308234212|ref|ZP_07664949.1| seryl-tRNA synthetase [Atopobium vaginae DSM 15829]
          Length = 396

 Score = 61.0 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 62/188 (32%), Gaps = 17/188 (9%)

Query: 272 GWKIFQTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G ++ + LI++ +    +  ++E   P + +      +G    +  ++F V         
Sbjct: 160 GAQMERALINFFIDMHNEAGFKEWWPPVLTNYDSLFGTGQLPKFDEDLFHV--------- 210

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFT 387
                L P        +    +    +LP++   F   +R E   +     G++RV  F 
Sbjct: 211 SNDLYLIPTAEVMLTNLHRDEVLDASQLPLKYTAFTPCFREEAGSAGRDTRGIIRVHEFD 270

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALWDD 443
           + +   F   E   N+   +        +  G    +V L T              +W  
Sbjct: 271 KVEMVKFAKPEDSMNQLESMVAEAEKCLQVLGLAYRVVSLCTGDIGFSACKCYDLEVWLP 330

Query: 444 AENIMKGV 451
           + N  K +
Sbjct: 331 SYNNYKEI 338


>gi|317047549|ref|YP_004115197.1| seryl-tRNA synthetase [Pantoea sp. At-9b]
 gi|316949166|gb|ADU68641.1| seryl-tRNA synthetase [Pantoea sp. At-9b]
          Length = 430

 Score = 61.0 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 60/188 (31%), Gaps = 10/188 (5%)

Query: 273 WKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M      +  Y E   P +++      +G    +  ++F  K  D+    
Sbjct: 170 ARLHRALSQFMIDLHTQQHGYLETYVPYLVNHDTLYGTGQLPKFGEDLFHTKPLDEEAG- 228

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
              +AL P        +    +     LP++L      +R+E         GL+R+  F 
Sbjct: 229 SSNYALIPTAEVPLTNLVRDEIVEEENLPIKLTAHTPCFRSEAGSYGRDTRGLIRMHQFD 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E       ++      + +        V L T              +W  
Sbjct: 289 KVEMVQIVAPETSMQALEELVGHAEKVLQLLNLPYRKVLLCTGDMGFGSTKTYDLEVWLP 348

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 349 AQNTYREI 356


>gi|198276957|ref|ZP_03209488.1| hypothetical protein BACPLE_03162 [Bacteroides plebeius DSM 17135]
 gi|198270482|gb|EDY94752.1| hypothetical protein BACPLE_03162 [Bacteroides plebeius DSM 17135]
          Length = 872

 Score = 61.0 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 42/248 (16%), Positives = 90/248 (36%), Gaps = 26/248 (10%)

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDELAQ 121
              D R+     HSC H++ EA++ +        G  +  +   +DF   Q  + +++ +
Sbjct: 551 VDTDKRAACAANHSCTHLLDEALRQVLGTHVEQKGSLVTPESLRFDFSHFQKVTPEQIRE 610

Query: 122 IEKKMQEIIARDSPF-LKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +E  +   I  + P    + L  EKA+EL        K          + V + + G   
Sbjct: 611 VEHLVNAKIRENVPLTEYRNLPIEKAKELGAIALFGEKY--------GDEVRVVQFGSSI 662

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVA---GAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
           + C G HV +TG++     + + +   G           +  ++ T  +T  +L      
Sbjct: 663 EFCGGTHVSATGKIGMVKIISESSVAAGVRRIEAVTGAKVEEMFDTVQDTINDLKALFNN 722

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTP 297
             + +    + +     L    E+               +   + ++ K+ +  +EIN  
Sbjct: 723 APDLKAAISKYIEENAGLKKQMEEF-------------MKEKEAAVKNKLIEGAKEINGV 769

Query: 298 QVLDQHLW 305
           +V+   L 
Sbjct: 770 KVIKAVLP 777


>gi|322711570|gb|EFZ03143.1| prolyl-tRNA synthetase [Metarhizium anisopliae ARSEF 23]
          Length = 578

 Score = 61.0 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 49/152 (32%), Gaps = 20/152 (13%)

Query: 487 IGRDWQCGT-IQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKG- 544
           I R  + G    +       F       +S+   PV +     G   R  G + E+    
Sbjct: 253 IHRALELGHTFYLGSRYSKPFELSVTLPNSKAPVPVEMGCYGIGVS-RIFGAVAEHKADE 311

Query: 545 ---NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSH-----HLSIETDFRNETINYKIR 596
              N P  ++P + +V   TS       E  + L S            D R ET  +K++
Sbjct: 312 RGLNWPRAIAPFEIVVIP-TSGVNSQTLEFHDKLTSWSSTGPGFDAVLDDRKETFGWKMQ 370

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
           +  +   P+ I+ G           R  G   
Sbjct: 371 DADMTGYPVTIVLGK--------AWRERGKLQ 394


>gi|296208728|ref|XP_002751220.1| PREDICTED: seryl-tRNA synthetase, cytoplasmic [Callithrix jacchus]
          Length = 512

 Score = 61.0 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 57/165 (34%), Gaps = 11/165 (6%)

Query: 271 KGWKIF--QTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
           KG  +F  Q LI Y +R      Y  I TP  + + + Q+      +   ++ V      
Sbjct: 197 KGVLVFLEQALIQYALRTLGSRGYIPIYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGSE 256

Query: 328 IKDLRTFALKP---MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLM 381
             D  ++  K     +     A+         +LP++ A   + +R E         G+ 
Sbjct: 257 KSDDNSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGRDTRGIF 316

Query: 382 RVRGFTQDDAHVFCTKEQ--MFNECLKIHNLIISIYKDFGFEKIM 424
           RV  F + +  V+ +      +    ++       Y+  G    +
Sbjct: 317 RVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHI 361


>gi|282874728|ref|ZP_06283607.1| serine--tRNA ligase [Staphylococcus epidermidis SK135]
 gi|281296444|gb|EFA88959.1| serine--tRNA ligase [Staphylococcus epidermidis SK135]
 gi|329736077|gb|EGG72350.1| serine--tRNA ligase [Staphylococcus epidermidis VCU045]
          Length = 428

 Score = 61.0 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 52/356 (14%), Positives = 115/356 (32%), Gaps = 32/356 (8%)

Query: 111 EQPFSSDELAQIEKKMQEIIARDSPFLKQYLSH-EKARELFESKKEAYKVEILESIPAKE 169
           E+  S  EL   + K+ + +       ++ +S  E+ +       E    +      A +
Sbjct: 12  EKVKSKIELRGDDPKVVDQVLELDEQRRELISKTEEMKAKRNKVSEEIAQKKRNKEDADD 71

Query: 170 NVTLYRQ-GEWFDLCRGPHVRSTGQVK----KFFKLMKVAGAYWRGDSNRPMLSRIYGTA 224
            +   R  G+              +++    +   L+         D     + + +GT 
Sbjct: 72  VIAEMRHLGDEIKDIDNQLNEVDNKIRDILIRIPNLINEDVPQGDSDEENVEVKK-WGTP 130

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR 284
            + + E   +   +EE +  D  + A+      +             G  + + L++YM 
Sbjct: 131 RDFEFEPKAHWDLVEELKMADFERAAKVSGARFVYLTK--------DGALLERALMNYML 182

Query: 285 RKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
            K   +  Y E+ TPQ+++      +G    +  ++F V        +       P    
Sbjct: 183 TKHTTQHGYTEMMTPQLVNADTMFGTGQLPKFEEDLFKV--------EKEGLYTIPTAEV 234

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQ 399
                +   +     LP       + +R+E   +     GL+R+  F + +       E 
Sbjct: 235 PLTNFYRDEIIQPGVLPELFTAQTACFRSEAGSAGRDTRGLIRLHQFDKVEMVRIVQPED 294

Query: 400 MFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
            +N   ++     +I ++ G     V L T              +W  + N  K +
Sbjct: 295 SWNALEEMTQNAEAILEELGLPYRRVILCTGDIGFSASKTYDLEVWLPSYNDYKEI 350


>gi|269926095|ref|YP_003322718.1| seryl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
 gi|269789755|gb|ACZ41896.1| seryl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
          Length = 423

 Score = 61.0 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 35/210 (16%), Positives = 75/210 (35%), Gaps = 20/210 (9%)

Query: 244 RDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTPQ 298
           R H ++   + +   A+     GS     H  G ++ + LI++M   + ++ Y+E+  P 
Sbjct: 137 RPHWEIGERLGIIDFAQGQKISGSRFYVLHGDGARLQRALITWMLDLRRQEGYKEVYPPA 196

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++ +     S H   +   M+        ++D   F   P        +  + +     L
Sbjct: 197 IVKEETLWASAHLPDFEDTMY------HDVEDDVWFI--PTAEAPLTGIHMNEIIPVESL 248

Query: 359 PVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           P+R A +   +R E       + G+ R   F + + + +   E       ++        
Sbjct: 249 PIRYAAYTPCFRREKMSAGKDVRGIKRGHQFDKVEMYHYTLPEDSPKHLEELVKHAEDTA 308

Query: 416 KDFGFEKIMVKLSTRP----EKRVGSDALW 441
              G    +V+L T       +R     +W
Sbjct: 309 IKLGLTCRVVELCTGDLGFKSRRTFDIEVW 338


>gi|229086952|ref|ZP_04219109.1| Alanyl-tRNA synthetase [Bacillus cereus Rock3-44]
 gi|228696328|gb|EEL49156.1| Alanyl-tRNA synthetase [Bacillus cereus Rock3-44]
          Length = 880

 Score = 61.0 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 34/161 (21%), Positives = 66/161 (40%), Gaps = 15/161 (9%)

Query: 44  NGK-----VCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP 98
           NG+     V +     +E +++ I     RS  V  H+  H++ +A++ +        G 
Sbjct: 531 NGQNLHKVVVEEGTLTKEAAVKAIIDTKNRSSVVKNHTATHLLHQALKDVLGTHVNQAGS 590

Query: 99  -IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAY 157
            +  +   +DF       +DEL +IE+ + E I           + E+A+E+        
Sbjct: 591 LVTSERLRFDFSHFGQVQADELEKIERIVNEKIWESIDVEISQKAIEEAKEMGAMALFGE 650

Query: 158 KVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
           K          + V + + G++  +LC G HV +T  +  F
Sbjct: 651 KY--------GDVVRVVQVGDYSLELCGGCHVDNTASIGIF 683


>gi|168180547|ref|ZP_02615211.1| alanyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
 gi|182668624|gb|EDT80603.1| alanyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
          Length = 879

 Score = 61.0 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 38/172 (22%), Positives = 75/172 (43%), Gaps = 23/172 (13%)

Query: 35  AKKAVAVAI-------NGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQS 87
            KK ++  I       +GKV        E  + +   E+ R+     H+  HI+  A+  
Sbjct: 525 CKKNISGKILHFVKILDGKVA------LEDQVILKVNEERRNNIRKNHTATHILHAALIK 578

Query: 88  IWPEVQVAIGPIIEDG-FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKA 146
           +  +     G  ++D    +DF   +  S DEL ++EK + + I + +    + ++ E+A
Sbjct: 579 VVGDHVQQSGSYVDDERLRFDFSHFEAVSEDELKEVEKIVNKEIMKANAVNTKVMNIEEA 638

Query: 147 RELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
           ++             L     K++V +   G++  +LC G HV ++GQ+  F
Sbjct: 639 KQ--------QGAIALFDNKYKDDVRVVSVGDFSKELCGGTHVSNSGQIGIF 682


>gi|149378261|ref|ZP_01895973.1| alanyl-tRNA synthetase [Marinobacter algicola DG893]
 gi|149357458|gb|EDM45968.1| alanyl-tRNA synthetase [Marinobacter algicola DG893]
          Length = 876

 Score = 61.0 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 56/135 (41%), Gaps = 12/135 (8%)

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIAR 132
            HS  H+M  A++++  E     G +++ D   +DF   +  + ++L +IE+++ E I  
Sbjct: 561 NHSATHLMHAALRNVLGEHVTQKGSLVDPDKLRFDFSHFEAVTPEQLREIERQVNEQILD 620

Query: 133 DSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG---EWFDLCRGPHVR 189
           ++P   +    E+A+          K          + V +   G      +LC G HV 
Sbjct: 621 NTPVETEITDMEQAQAKGAMALFGEKY--------GDTVRVLSMGSDAYSVELCGGTHVA 672

Query: 190 STGQVKKFFKLMKVA 204
            TG +  F    +  
Sbjct: 673 RTGDIGLFRITSESG 687


>gi|1050527|emb|CAA62635.1| seryl-tRNA synthetase [Homo sapiens]
          Length = 514

 Score = 61.0 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 57/165 (34%), Gaps = 11/165 (6%)

Query: 271 KGWKIF--QTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
           KG  +F  Q LI Y +R      Y  I TP  + + + Q+      +   ++ V      
Sbjct: 197 KGVLVFLEQALIQYALRTLGSRGYIPIYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGSE 256

Query: 328 IKDLRTFALKP---MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLM 381
             D  ++  K     +     A+         +LP++ A   + +R E         G+ 
Sbjct: 257 KSDDNSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGRDTRGIF 316

Query: 382 RVRGFTQDDAHVFCTKEQ--MFNECLKIHNLIISIYKDFGFEKIM 424
           RV  F + +  V+ +      +    ++       Y+  G    +
Sbjct: 317 RVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHI 361


>gi|73959359|ref|XP_866214.1| PREDICTED: similar to seryl-tRNA synthetase isoform 3 [Canis
           familiaris]
          Length = 513

 Score = 61.0 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 57/165 (34%), Gaps = 11/165 (6%)

Query: 271 KGWKIF--QTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
           KG  +F  Q LI Y +R      Y  I TP  + + + Q+      +   ++ V      
Sbjct: 196 KGVLVFLEQALIQYALRTLGSRGYTPIYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGSE 255

Query: 328 IKDLRTFALKP---MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLM 381
             D  ++  K     +     A+         +LP++ A   + +R E         G+ 
Sbjct: 256 KSDDNSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGRDTRGIF 315

Query: 382 RVRGFTQDDAHVFCTKEQ--MFNECLKIHNLIISIYKDFGFEKIM 424
           RV  F + +  V+ +      +    ++       Y+  G    +
Sbjct: 316 RVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEDFYQSLGIPYHI 360


>gi|257784208|ref|YP_003179425.1| histidyl-tRNA synthetase [Atopobium parvulum DSM 20469]
 gi|257472715|gb|ACV50834.1| histidyl-tRNA synthetase [Atopobium parvulum DSM 20469]
          Length = 436

 Score = 61.0 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 10/92 (10%), Positives = 28/92 (30%)

Query: 551 SPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           +P    V    +       +    L+   +  E D    ++  + ++       + ++ G
Sbjct: 342 APSCVYVACAGAEQAPVVFDAVLALREAGIRCEADRTGRSLKAQFKQADKMGAALCVVIG 401

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             E     + +R   S    +V     +  + 
Sbjct: 402 PDEVEAGVVTLRDMESHEQVQVPSDQLVAEVK 433


>gi|221633028|ref|YP_002522253.1| histidyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
 gi|221155481|gb|ACM04608.1| histidyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
          Length = 462

 Score = 61.0 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 20/114 (17%), Positives = 45/114 (39%), Gaps = 5/114 (4%)

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET- 590
           ER + ++ E      P  ++    +V ++ +     A  IA  L+   L  E     E  
Sbjct: 337 ERLVEVVDEYGLLPTPASVTE--VLVVSVEADHRAQALRIARELRQAGLDTEVYL-GERI 393

Query: 591 -INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +  +++    K +P+ +I G  E +   + +R   +    +V   + +  + K
Sbjct: 394 DLRRQLQYADRKGVPVAVIIGPDEIANDMVTVRDLRTGEQVRVPRAELVAAVRK 447


>gi|78066581|ref|YP_369350.1| histidyl-tRNA synthetase [Burkholderia sp. 383]
 gi|123742580|sp|Q39FR0|SYH_BURS3 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|77967326|gb|ABB08706.1| histidyl-tRNA synthetase [Burkholderia sp. 383]
          Length = 446

 Score = 61.0 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 63/414 (15%), Positives = 123/414 (29%), Gaps = 79/414 (19%)

Query: 289 DDYEEINTPQVLDQHLWQ--QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA 346
             Y+ I TP V    L+        D     M++   A +         ++P N    V 
Sbjct: 42  YGYQNIRTPIVEHTQLFTRGIGEVTDIVEKEMYSFTDALN----GENLTMRPEN-TAAVV 96

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD--DAHVFCTKEQMFNEC 404
             +       + P RL   G ++R+E         R R F Q   +A  F   +      
Sbjct: 97  RASIEHNMLYDGPKRLWYIGPMFRHERPQR----GRYRQFHQVGVEALGFAGPDADA--- 149

Query: 405 LKIHNLIISIYKDFG--------------FEKIMVKLSTRPEKRVGSDALWDDAENIM-- 448
            +I  +   ++ D G               E+   ++         +D L +DA+  +  
Sbjct: 150 -EIIMMCQRLWDDLGLTGIKLEINSLGLAEERAAHRVELIKYLEQFADVLDEDAKRRLYT 208

Query: 449 ---------KGVLDTIKNSSQDRINTGVLLGEGAFYGP-------KFEYILKDAIGRDWQ 492
                       L  I  ++   I+         F G           + +   + R   
Sbjct: 209 NPLRVLDTKNPALQEIAQNAPKLIDFLGDESRAHFEGLQRLLLANNIPFKINPRLVRGLD 268

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIH-------RAVFGS-IERFIGIMIENFKG 544
              + V   +  +  A    +   +  P++            +   IER + ++ E+   
Sbjct: 269 YYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQLGGKPTAACGWAMGIERILELLKEDD-- 326

Query: 545 NLPLWLSPIQ----AIVTTITSSAVEYAQEIANLLKSHHLSI----ETDFRNETINYKIR 596
                L+P Q      V     +A E A   A  L+   L +      D    +   +++
Sbjct: 327 -----LAPEQEGVDVYVVHQGETAREQAFIAAERLRDTGLDVIFHCSADGAPASFKSQMK 381

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGS-------TTTQKVSLLDAIPILTK 643
                     +I G++E +  ++G++              Q V +      L  
Sbjct: 382 RADASGAAFAVIFGEEEVANGTVGVKALRGAGGDGEKNVQQTVPVEGLTEFLIN 435


>gi|332237491|ref|XP_003267937.1| PREDICTED: seryl-tRNA synthetase, cytoplasmic [Nomascus leucogenys]
          Length = 514

 Score = 61.0 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 57/165 (34%), Gaps = 11/165 (6%)

Query: 271 KGWKIF--QTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
           KG  +F  Q LI Y +R      Y  I TP  + + + Q+      +   ++ V      
Sbjct: 197 KGVLVFLEQALIQYALRTLGSRGYIPIYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGSE 256

Query: 328 IKDLRTFALKP---MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLM 381
             D  ++  K     +     A+         +LP++ A   + +R E         G+ 
Sbjct: 257 KSDDNSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGRDTRGIF 316

Query: 382 RVRGFTQDDAHVFCTKEQ--MFNECLKIHNLIISIYKDFGFEKIM 424
           RV  F + +  V+ +      +    ++       Y+  G    +
Sbjct: 317 RVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHI 361


>gi|325288210|ref|YP_004264391.1| seryl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
 gi|324963611|gb|ADY54390.1| seryl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
          Length = 421

 Score = 61.0 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 43/243 (17%), Positives = 92/243 (37%), Gaps = 21/243 (8%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHI----AEDGSGVIFWHRKGWKIF 276
           G   +   EL ++    +   E + H +L   +D+          G+   F+   G K+ 
Sbjct: 114 GKDEHDNIELRKWGTPKKFEFEPKAHFELGENLDILDFVRGGKVTGARFTFYKGLGAKLE 173

Query: 277 QTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFA 335
           ++LI++M  R     Y EI  P ++ ++    +G    +  + F V        +   + 
Sbjct: 174 RSLINFMLDRHTAKGYSEIFPPFMVHRNSMFGTGQLPKFEQDAFKV--------ENTEYF 225

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAH 392
           L P        ++   +    +LP+R   + + +R E   +     G++R   F + +  
Sbjct: 226 LIPTAEVPVTNLYRDEILEAEKLPIRHCAYSACFRAEAGAAGRDTRGIIRQHQFNKVELV 285

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIM 448
            F   E+ + E  ++ N   +I ++      +V LST              +W  + N  
Sbjct: 286 KFSLPEKSYEELEELTNSAETILQELELPYRVVALSTGDMGFSSAKTYDIEVWLPSFNTY 345

Query: 449 KGV 451
           + +
Sbjct: 346 REI 348


>gi|183598338|ref|ZP_02959831.1| hypothetical protein PROSTU_01730 [Providencia stuartii ATCC 25827]
 gi|188020514|gb|EDU58554.1| hypothetical protein PROSTU_01730 [Providencia stuartii ATCC 25827]
          Length = 429

 Score = 61.0 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 66/191 (34%), Gaps = 17/191 (8%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M     +   Y+E+  P +++      +G    +  ++F  K  ++    
Sbjct: 170 ARLHRALAQFMLDLHTEQHGYQELYVPYLVNHDTLYGTGQLPKFGEDLFHTKPLEEEA-- 227

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
             T+AL P        +    +     LP+++      +R+E         GL+R+  F 
Sbjct: 228 ESTYALIPTAEVPVTNLVRDEILDEDALPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFD 287

Query: 388 QDDAHVFCTKEQMFN-------ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           + +       E+             K+  L+   Y+        +   +R         +
Sbjct: 288 KVELVQIVHPEKSMEALEELTGHAEKVLQLLKLPYRKVILCTGDIGFGSRKTY---DLEV 344

Query: 441 WDDAENIMKGV 451
           W  A+N  + +
Sbjct: 345 WLPAQNTYREI 355


>gi|57239428|ref|YP_180564.1| histidyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|58579400|ref|YP_197612.1| histidyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|81672776|sp|Q5HAI0|SYH_EHRRW RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|57161507|emb|CAH58433.1| histidyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|58418026|emb|CAI27230.1| Histidyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
          Length = 414

 Score = 61.0 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 63/410 (15%), Positives = 135/410 (32%), Gaps = 92/410 (22%)

Query: 288 KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
           +  +  ++TP +    ++ + G+     +++   +  +   K      L+P       A+
Sbjct: 36  RYGFIPVDTPIIEFTEVFTKLGN----TSDIVTKEMYNFKDKAGEDITLRP---EFTSAI 88

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNE---- 403
               +     +PV+L   G V+R E         R R F Q +   F +   + +     
Sbjct: 89  VRLLISKNLTIPVKLFSSGPVFRYERPQKC----RQRQFHQINFEFFGSDSPIADVEMIS 144

Query: 404 -CLKIH------NLIISIYKDFGFEKIMVKLSTRPEKRVG-------------------- 436
            C  I       + I       G ++ +        + +                     
Sbjct: 145 LCYNILSELKLSDRIKLEINFLGDQETINSYKIHLVEYLNKYQKDLSEDSQRRLVVNPLR 204

Query: 437 -------------------SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLG--EGAFY 475
                              SD    +++N  K VLD + N S   IN  +      G  Y
Sbjct: 205 ILDSKSPEDCKILLNAPSISDFYNQNSQNFFKEVLDGLDNLS---INYVINHNIVRGLDY 261

Query: 476 GPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
             K  +    +          Q       R++   V S      P +        +ER +
Sbjct: 262 YCKTVFEFTTSE------LGSQNSVIAGGRYDGL-VKSMGGHSTPAI---GFAAGVER-L 310

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIE-TDFRNETINYK 594
             +I+           P + ++  I   A+ YA ++A  L+   + +   ++R  ++   
Sbjct: 311 SALIDYEHKK------PKRIVLIPIGDDAISYAIKLAYELRCKGIHVCWNNYRGTSL--- 361

Query: 595 IREHSIKKIP---IIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
             ++ ++K     I++I GD+E    ++ ++   +   Q V++ D +  L
Sbjct: 362 --KNELRKANDTDIVLIFGDEELQSNTVKVKDMKTGDQQNVAVCDLLDNL 409


>gi|197097784|ref|NP_001125910.1| seryl-tRNA synthetase, cytoplasmic [Pongo abelii]
 gi|75070681|sp|Q5R9K9|SYSC_PONAB RecName: Full=Seryl-tRNA synthetase, cytoplasmic; AltName:
           Full=Serine--tRNA ligase; Short=SerRS; AltName:
           Full=Seryl-tRNA(Ser/Sec) synthetase
 gi|55729644|emb|CAH91551.1| hypothetical protein [Pongo abelii]
          Length = 514

 Score = 61.0 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 57/165 (34%), Gaps = 11/165 (6%)

Query: 271 KGWKIF--QTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
           KG  +F  Q LI Y +R      Y  I TP  + + + Q+      +   ++ V      
Sbjct: 197 KGVLVFLEQALIQYALRTLGSRGYIPIYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGSE 256

Query: 328 IKDLRTFALKP---MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLM 381
             D  ++  K     +     A+         +LP++ A   + +R E         G+ 
Sbjct: 257 KSDDNSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGRDTRGIF 316

Query: 382 RVRGFTQDDAHVFCTKEQ--MFNECLKIHNLIISIYKDFGFEKIM 424
           RV  F + +  V+ +      +    ++       Y+  G    +
Sbjct: 317 RVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHI 361


>gi|16306548|ref|NP_006504.2| seryl-tRNA synthetase, cytoplasmic [Homo sapiens]
 gi|19860217|sp|P49591|SYSC_HUMAN RecName: Full=Seryl-tRNA synthetase, cytoplasmic; AltName:
           Full=Serine--tRNA ligase; Short=SerRS; AltName:
           Full=Seryl-tRNA(Ser/Sec) synthetase
 gi|7768886|dbj|BAA95602.1| Seryl tRNA Synthetase [Homo sapiens]
 gi|12653851|gb|AAH00716.1| Seryl-tRNA synthetase [Homo sapiens]
 gi|55959083|emb|CAI13599.1| seryl-tRNA synthetase [Homo sapiens]
 gi|119576773|gb|EAW56369.1| seryl-tRNA synthetase, isoform CRA_e [Homo sapiens]
 gi|123982658|gb|ABM83070.1| seryl-tRNA synthetase [synthetic construct]
 gi|123997327|gb|ABM86265.1| seryl-tRNA synthetase [synthetic construct]
 gi|189053470|dbj|BAG35636.1| unnamed protein product [Homo sapiens]
 gi|261859898|dbj|BAI46471.1| seryl-tRNA synthetase [synthetic construct]
          Length = 514

 Score = 61.0 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 57/165 (34%), Gaps = 11/165 (6%)

Query: 271 KGWKIF--QTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
           KG  +F  Q LI Y +R      Y  I TP  + + + Q+      +   ++ V      
Sbjct: 197 KGVLVFLEQALIQYALRTLGSRGYIPIYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGSE 256

Query: 328 IKDLRTFALKP---MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLM 381
             D  ++  K     +     A+         +LP++ A   + +R E         G+ 
Sbjct: 257 KSDDNSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGRDTRGIF 316

Query: 382 RVRGFTQDDAHVFCTKEQ--MFNECLKIHNLIISIYKDFGFEKIM 424
           RV  F + +  V+ +      +    ++       Y+  G    +
Sbjct: 317 RVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHI 361


>gi|242008599|ref|XP_002425090.1| Seryl-tRNA synthetase, putative [Pediculus humanus corporis]
 gi|212508755|gb|EEB12352.1| Seryl-tRNA synthetase, putative [Pediculus humanus corporis]
          Length = 490

 Score = 61.0 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 27/221 (12%), Positives = 68/221 (30%), Gaps = 14/221 (6%)

Query: 214 RPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIF----WH 269
             + S +  +    + ++ +        +K  H  L     +  +  D    I     ++
Sbjct: 138 NHLHSSVPISNDEDENKVERTFGDCSTKKKYSHVDLI--HMIDGMDGDRGANISGGRGYY 195

Query: 270 RKGWKIFQ---TLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADD 326
            KG  +F     +   ++  +K  ++ + TP  + + + Q+      +   ++ V     
Sbjct: 196 LKGAAVFLQHALIQLSLKMLLKKGFQPLYTPFFMKKEVMQEVAQLSQFDEELYKVTGKGS 255

Query: 327 TIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRV 383
               +    L   +     A           LP++ A   + +R E         G+ RV
Sbjct: 256 EKGGVEEKYLIATSEQPIAAFHRDEWIPENNLPIKYAGISTCFRQEVGSHGRDTRGIFRV 315

Query: 384 RGFTQDDAHVFCTKEQ--MFNECLKIHNLIISIYKDFGFEK 422
             F + +  V  +      +    ++        +  G   
Sbjct: 316 HQFEKVEQFVLTSPHDNKSWEMMDEMIGNAEEFCQSLGIPY 356


>gi|313201446|ref|YP_004040104.1| histidyl-tRNA synthetase [Methylovorus sp. MP688]
 gi|312440762|gb|ADQ84868.1| histidyl-tRNA synthetase [Methylovorus sp. MP688]
          Length = 418

 Score = 61.0 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 65/413 (15%), Positives = 130/413 (31%), Gaps = 47/413 (11%)

Query: 269 HRKGWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
             +   ++Q L    R+ + +  Y  I  P V    L+ +S    +           D  
Sbjct: 15  LPEQTALWQKLEDTARQVLGQYGYRNIRMPIVEPTDLFIRSVGEHTDIVEKEMYSWVDAL 74

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE--PSGSLHGLMRVRG 385
             D     L+P    G V        +Y   P RL   G ++R+E    G      R R 
Sbjct: 75  NGDK--LTLRPEGTAGCVRAVVEHSLTYNG-PQRLWYMGPMFRHENVQKG------RQRQ 125

Query: 386 FTQD--DAHVFCTKEQMFNECLKIHNLIISI--------YKDFGFEKIMVKLSTRPEKRV 435
           F Q   +A  +   E    + + +  L  ++            G      +         
Sbjct: 126 FHQIGVEAFGYAQPEVDAEQIMLLARLWRALGLTDVELQLNTIGDAAERAEYRQVLIAYF 185

Query: 436 --GSDALWDDAENIMKG----VLD-------TIKNSSQDRINTGVLLGEGAFYG------ 476
              +D L +DA+  +      +LD        +   +   ++T        F        
Sbjct: 186 EQHADLLDEDAKRRLHTNPLRILDSKNPRMQAMIEGAPRLLDTLGGESRAHFDAVCALLK 245

Query: 477 -PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI 535
                ++L   + R        V   + +R  +    +   +   ++       +     
Sbjct: 246 AANIPFVLNTRLVRGLDYYNRTVFEWVTTRLGSQGTIAGGGRYDTLVERLGGDATPACGF 305

Query: 536 GIMIENFKGNLPLW-LSPIQA---IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           GI +E     +  + +   Q     +  +   A   A ++A  L+   +S+       + 
Sbjct: 306 GIGLERVFLLMQEYGIEATQGLDGYLVNLGEQAERLAPQVAEQLRDAGISVALHTGGGSF 365

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIR-RFGSTTTQKVSLLDAIPILTK 643
             ++++         +I GD+EA    I ++   G    Q++ LL AI  L +
Sbjct: 366 KSQMKKADRSGARFALILGDEEAQAGQITLKPMLGGGEQQRLDLLQAIQHLKE 418


>gi|311334530|emb|CBN08646.1| seryl-tRNA synthetase [Microcosmus squamiger]
          Length = 449

 Score = 61.0 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 25/142 (17%), Positives = 51/142 (35%), Gaps = 5/142 (3%)

Query: 288 KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAV--KCADDTIKDLRTFALKPMNCPGHV 345
            + Y  + TP  + + + Q+      +   ++ V  K +D + + +    L   +     
Sbjct: 217 DNGYTPLYTPFFMRKEMMQEVAQLSQFDEELYKVIGKASDKSDEGVDEKYLIATSEQPIA 276

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFN 402
           A          +LP++ A F + +R E         G+ RV  F + +  VF   +  + 
Sbjct: 277 AFHRDEWLKREDLPIKYAGFSTCFRQEAGSHGRDTRGIFRVHQFEKIEQFVFSAPDDSWE 336

Query: 403 ECLKIHNLIISIYKDFGFEKIM 424
               +     S YK  G    +
Sbjct: 337 AFDTMIGTAESFYKKLGIPYRI 358


>gi|289193291|ref|YP_003459232.1| glycyl-tRNA synthetase [Methanocaldococcus sp. FS406-22]
 gi|288939741|gb|ADC70496.1| glycyl-tRNA synthetase [Methanocaldococcus sp. FS406-22]
          Length = 577

 Score = 61.0 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 16/96 (16%), Positives = 41/96 (42%), Gaps = 3/96 (3%)

Query: 550 LSPIQAIVTTITSSAV--EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIII 607
           ++PI+A V  + +     + A+EI  +L+ + +  E D     I  +        +P  I
Sbjct: 479 IAPIKAYVLPLVNKEDMPKIAKEIEKMLRENGIIAEYDDSGA-IGRRYMRADEIGVPFCI 537

Query: 608 ICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
               +   ++++ +R   +    +V + + +  L +
Sbjct: 538 TVDGQTLKDKTVTVRERNTREQVRVKIDELVDYLKE 573



 Score = 44.0 bits (102), Expect = 0.083,   Method: Composition-based stats.
 Identities = 41/211 (19%), Positives = 67/211 (31%), Gaps = 60/211 (28%)

Query: 256 FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGH--- 310
           F I    +G + +   G  +   +IS  R +   K+ + EI +P V    + + SGH   
Sbjct: 23  FEIYGGIAGFVDYGPLGCLLKNNIISKFREQYIVKEGFYEIESPTVTPYEVLKASGHVDN 82

Query: 311 ----------------WDSYRANMFAVKCADDTIKDLRTF-------------------- 334
                            D        V     T+K+L                       
Sbjct: 83  FTDPIVECKNCLESFRADHLIEEFVDVDTEGKTLKELEELIRKHNIRCPKCGGELGEVKK 142

Query: 335 -----------------ALKPMNCPGHVAVFNHGLKSYRE-LPVRLAEFGSVYRNEPSGS 376
                             ++P    G    F    + +R  LP  + + G  YRNE S  
Sbjct: 143 FNLMFVTSIGPGGKRTGYMRPETAQGIFIQFRRLAQFFRNKLPFGVVQIGKSYRNEISPR 202

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
             G++R+R FTQ +   F   E+  +E   +
Sbjct: 203 -QGVIRLREFTQAEIEYFVHPERKEHEKFDL 232


>gi|237715588|ref|ZP_04546069.1| seryl-tRNA synthetase [Bacteroides sp. D1]
 gi|262408597|ref|ZP_06085143.1| seryl-tRNA synthetase [Bacteroides sp. 2_1_22]
 gi|294647519|ref|ZP_06725099.1| serine--tRNA ligase [Bacteroides ovatus SD CC 2a]
 gi|294808139|ref|ZP_06766907.1| serine--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
 gi|298481433|ref|ZP_06999625.1| serine--tRNA ligase [Bacteroides sp. D22]
 gi|229444297|gb|EEO50088.1| seryl-tRNA synthetase [Bacteroides sp. D1]
 gi|262353462|gb|EEZ02556.1| seryl-tRNA synthetase [Bacteroides sp. 2_1_22]
 gi|292637131|gb|EFF55569.1| serine--tRNA ligase [Bacteroides ovatus SD CC 2a]
 gi|294444646|gb|EFG13345.1| serine--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
 gi|295086896|emb|CBK68419.1| seryl-tRNA synthetase [Bacteroides xylanisolvens XB1A]
 gi|298272297|gb|EFI13866.1| serine--tRNA ligase [Bacteroides sp. D22]
          Length = 424

 Score = 61.0 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 68/198 (34%), Gaps = 16/198 (8%)

Query: 245 DHRKLAREMDLFHIA----EDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQV 299
            H +LA++ DL          G+G   +  KG ++ + LI++ +    K  Y EI  P V
Sbjct: 143 PHWELAKKYDLIDFDLGVKITGAGFPVYKGKGAQLQRALINFFLDEARKSGYTEIMPPTV 202

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           ++            Y       K       ++    L P        ++   +   ++LP
Sbjct: 203 VNA--------ASGYGTGQLPDKEGQMYHCEVDDLYLIPTAEVPVTNIYRDVILEEKQLP 254

Query: 360 VRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +    +   +R E       + GL R+  F++ +       E       ++ + +  + +
Sbjct: 255 IMNCAYTQCFRREAGSYGKDVRGLNRLHEFSKVELVRIDKPEHSKQSHQEMLDHVEGLLQ 314

Query: 417 DFGFEKIMVKLSTRPEKR 434
                  +++L       
Sbjct: 315 KLELPYRILRLCGGDMSF 332


>gi|255693386|ref|ZP_05417061.1| serine--tRNA ligase [Bacteroides finegoldii DSM 17565]
 gi|260620864|gb|EEX43735.1| serine--tRNA ligase [Bacteroides finegoldii DSM 17565]
          Length = 424

 Score = 61.0 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 68/198 (34%), Gaps = 16/198 (8%)

Query: 245 DHRKLAREMDLFHIA----EDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQV 299
            H +LA++ DL          G+G   +  KG ++ + LI++ +    K  Y EI  P V
Sbjct: 143 PHWELAKKYDLIDFDLGVKITGAGFPVYKGKGAQLQRALINFFLDEARKSGYTEIMPPTV 202

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           ++            Y       K       ++    L P        ++   +   ++LP
Sbjct: 203 VNA--------ASGYGTGQLPDKEGQMYHCEVDDLYLIPTAEVPVTNIYRDVILEEKQLP 254

Query: 360 VRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +    +   +R E       + GL R+  F++ +       E       ++ + +  + +
Sbjct: 255 IMNCAYTQCFRREAGSYGKDVRGLNRLHEFSKVELVRIDKPEHSKQSHQEMLDHVEGLLQ 314

Query: 417 DFGFEKIMVKLSTRPEKR 434
                  +++L       
Sbjct: 315 KLELPYRILRLCGGDMSF 332


>gi|197116508|ref|YP_002136935.1| seryl-tRNA synthetase [Geobacter bemidjiensis Bem]
 gi|238690859|sp|B5E8F6|SYS_GEOBB RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|197085868|gb|ACH37139.1| seryl-tRNA synthetase [Geobacter bemidjiensis Bem]
          Length = 422

 Score = 61.0 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 68/189 (35%), Gaps = 17/189 (8%)

Query: 272 GWKIFQTLISYMRRKIKDD--YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
           G ++ + LI+YM     D+  Y E+  P ++++     +G    +  ++F ++  D    
Sbjct: 168 GARLERALINYMLDLHTDEHKYIEMLPPFMVNRECMTGTGQLPKFEEDLFHMEGVD---- 223

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGF 386
               F L P        +    +    +LP+    +   +R E         GL+R   F
Sbjct: 224 ----FFLIPTAEVPVTNIHRGEILKGSDLPISYVAYTPCFRKEAGSYGKDTRGLIRQHQF 279

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG----SDALWD 442
            + +   F + E  + +  K+      + +       +V+L T              +W 
Sbjct: 280 NKVELVKFTSPEDSYQQLQKLLGHAEEVLRRLQIPYRVVELCTGDIGFSAAKTFDIEVWL 339

Query: 443 DAENIMKGV 451
             +N  + +
Sbjct: 340 PGQNCYREI 348


>gi|303231013|ref|ZP_07317756.1| serine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
 gi|302514395|gb|EFL56394.1| serine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
          Length = 426

 Score = 61.0 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 41/246 (16%), Positives = 86/246 (34%), Gaps = 21/246 (8%)

Query: 219 RIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIF--WHRKGWK 274
            +        ++         + E + H  +  ++D+  F+ A   SG  F  +   G +
Sbjct: 112 PVGADEDENVEQRKWGEPRQFDFEPKAHWDIGEDLDILDFNRAVKMSGARFTVYKGLGAR 171

Query: 275 IFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           + + LI++M     D   Y E+ TP ++ +     +G    +  +M+ V+          
Sbjct: 172 LERALINFMVDLHVDKQGYTEMMTPYMVTRETLTGTGQLPKFAEDMYHVED--------T 223

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQD 389
            + L P          +  + S  ELP     F + +R E   +     GL+R   F + 
Sbjct: 224 EYFLIPTAEVTLTNYHSGEILSEDELPKYYTAFTACFRAEAGSAGRDTRGLIRQHQFNKV 283

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYK----DFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
           +       E  +NE  K+ +    + +     F    +          +     +W  A+
Sbjct: 284 EMVKLSKPEDSWNELEKLTDNAEEVLRLLELPFRVITLCTGDIGFGSAKTYDVEVWMPAQ 343

Query: 446 NIMKGV 451
           N  + +
Sbjct: 344 NKYREI 349


>gi|298368683|ref|ZP_06980001.1| alanine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
 gi|298282686|gb|EFI24173.1| alanine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
          Length = 1021

 Score = 61.0 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 39/165 (23%), Positives = 67/165 (40%), Gaps = 14/165 (8%)

Query: 36  KKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           K AV     G V      V +  S EI    D R   +  HS  H+M +A++ +      
Sbjct: 672 KAAVHGQF-GAVVSGRLKVGDAVSAEI--DNDIRDSIMRNHSVTHLMHKALRDVLGTHVE 728

Query: 95  AIGPIIEDGF-YYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESK 153
             G +       +D    Q  S++E+A++E+++   I  + P   + +S E A++     
Sbjct: 729 QKGSLQNAELTRFDISHPQGISAEEIAEVERRVNAAIIANVPVKVETMSIEDAQKSGAMM 788

Query: 154 KEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
               K          + V +   G++  +LC G HV  TG +  F
Sbjct: 789 LFGEKY--------GDFVRVITMGDYSTELCGGTHVARTGDIGFF 825


>gi|294636937|ref|ZP_06715263.1| serine--tRNA ligase [Edwardsiella tarda ATCC 23685]
 gi|291089855|gb|EFE22416.1| serine--tRNA ligase [Edwardsiella tarda ATCC 23685]
          Length = 430

 Score = 61.0 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 44/244 (18%), Positives = 85/244 (34%), Gaps = 15/244 (6%)

Query: 222 GTAWNTQQELTQYLY-FLEESEKRDHRKLAREMD--LFHIAEDGSGVIFWHRKG--WKIF 276
           G   N   E++++      + E RDH  L    D   F  A   +G  F   KG   ++ 
Sbjct: 114 GKDENDNLEVSRWGEPRHYDFEVRDHVTLGEMADGLDFAAAVKLTGARFVVMKGQIARMH 173

Query: 277 QTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           + L  +M     +   Y E   P +++      +G    + A++F  +  ++   D  T+
Sbjct: 174 RALAQFMLDLHTEQHGYLETYVPYLVNHDTLYGTGQLPKFGADLFHTRPLEEEA-DSSTY 232

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDA 391
           AL P        +    +    ELP+++      +R+E         GL+R+  F + + 
Sbjct: 233 ALIPTAEVPVTNLVRGEILDESELPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEL 292

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENI 447
                 E       ++      + +        V L T              +W  A+N 
Sbjct: 293 VQIVRPEDSMAALEELTGHAEKVLQLLNLPYRKVLLCTGDMGFGSSKTYDLEVWVPAQNT 352

Query: 448 MKGV 451
            + +
Sbjct: 353 YREI 356


>gi|148380519|ref|YP_001255060.1| alanyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
 gi|153932600|ref|YP_001384806.1| alanyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|153937856|ref|YP_001388276.1| alanyl-tRNA synthetase [Clostridium botulinum A str. Hall]
 gi|205830027|sp|A7FWJ5|SYA_CLOB1 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|205830031|sp|A5I4Z5|SYA_CLOBH RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|148290003|emb|CAL84122.1| putative alanyl-tRNA synthetase [Clostridium botulinum A str. ATCC
           3502]
 gi|152928644|gb|ABS34144.1| alanyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|152933770|gb|ABS39269.1| alanine--tRNA ligase [Clostridium botulinum A str. Hall]
          Length = 879

 Score = 61.0 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 38/172 (22%), Positives = 75/172 (43%), Gaps = 23/172 (13%)

Query: 35  AKKAVAVAI-------NGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQS 87
            KK ++  I       +GKV        E  + +   E+ R+     H+  HI+  A+  
Sbjct: 525 CKKNISGKILHFVKILDGKVA------LEDQVILKVNEERRNNIRKNHTATHILHAALIK 578

Query: 88  IWPEVQVAIGPIIEDG-FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKA 146
           +  +     G  ++D    +DF   +  S DEL ++EK + + I + +    + ++ E+A
Sbjct: 579 VVGDHVQQSGSYVDDERLRFDFSHFEAVSEDELKEVEKIVNKEIMKANAVNTKVMNIEEA 638

Query: 147 RELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
           ++             L     K++V +   G++  +LC G HV ++GQ+  F
Sbjct: 639 KQ--------QGAIALFDNKYKDDVRVVSVGDFSKELCGGTHVSNSGQIGIF 682


>gi|284048255|ref|YP_003398594.1| alanyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
 gi|283952476|gb|ADB47279.1| alanyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
          Length = 875

 Score = 61.0 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 32/149 (21%), Positives = 55/149 (36%), Gaps = 8/149 (5%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFS 115
             +E       R+     H+  H++  A++ +        G  +  D   +DF    P +
Sbjct: 544 DEVEFEVNLKRRADIARNHTATHLLHAALKQVLGSHVNQAGSYVGPDRLRFDFSHFSPLT 603

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            +ELAQ+E  + E I             EKARE+        K   +  +       +  
Sbjct: 604 EEELAQVEDIVNEKILDAVDVEISQQELEKAREMGAMALFGEKYGKIVRV-------VNV 656

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLMKVA 204
            G   +LC G HV +T  +  F  L + +
Sbjct: 657 PGYSMELCGGVHVSNTSHIGLFKILSESS 685


>gi|257875866|ref|ZP_05655519.1| seryl-tRNA synthetase [Enterococcus casseliflavus EC20]
 gi|257810032|gb|EEV38852.1| seryl-tRNA synthetase [Enterococcus casseliflavus EC20]
          Length = 425

 Score = 61.0 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 33/244 (13%), Positives = 85/244 (34%), Gaps = 22/244 (9%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIF 276
           G   +   E+ ++        E + H ++A ++ +          GS  +++   G ++ 
Sbjct: 115 GKDEDDNVEIRRWAEPKTFDFEPKPHWEIAEDLGILDFERGAKVSGSRFVYYKGLGARLE 174

Query: 277 QTLISYMRRK--IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           + L ++M  +   +  Y E+ TP +++      +G +  ++ ++F +   D T+      
Sbjct: 175 RALYNFMLDQHVYEHGYTEMITPYIVNSQAMFGTGQFPKFKEDVFQLADTDLTLI----- 229

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDA 391
              P         +   +    +LP         +R+E   +     GL+R+  F + + 
Sbjct: 230 ---PTAEVPLTNYYQGEILEQEQLPAYFTALSPSFRSEAGSAGRDTRGLIRLHQFNKVEM 286

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKI----MVKLSTRPEKRVGSDALWDDAENI 447
             F   +  + E  K+      I +                     +     +W  A+ +
Sbjct: 287 VKFSDADHSYEELEKMTANAEDILQKLNLPYRVLSLCTGDMGFSAAKTYDLEVWIPAQEM 346

Query: 448 MKGV 451
            + +
Sbjct: 347 YREI 350


>gi|227509920|ref|ZP_03939969.1| seryl-tRNA synthetase [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
 gi|227190640|gb|EEI70707.1| seryl-tRNA synthetase [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
          Length = 427

 Score = 61.0 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 29/222 (13%), Positives = 78/222 (35%), Gaps = 18/222 (8%)

Query: 242 EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLIS-YMRRKIKDDYEEINT 296
           + + H  +   + +          GS  +++   G  + + + + Y+ +  +  Y+E+  
Sbjct: 136 KPKHHWDIGENLGILDFERAAKVSGSRFVYYMGDGALLERAVYNFYLDQNTEAGYQEVIP 195

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +++      +G +  +      ++             + P      V  + + +    
Sbjct: 196 PYMVNGASMYGTGQFPKF------LESKAGYEITGTDLTMIPTAEVPLVNYYRNEIIPEE 249

Query: 357 ELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           +LPV        +R+E   +     GL+R+  F + +   F   E  ++   +I +    
Sbjct: 250 KLPVSFTALSPAFRSEAGSAGRDTKGLIRLHQFNKVEMVKFTKSEDSWDALEQITHQAED 309

Query: 414 IYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
             K  G    ++ L+T              +W  A++  + +
Sbjct: 310 NLKKLGLAYHVITLTTSDMSFTAAMTHDLEVWFPAQDKYREI 351


>gi|170691961|ref|ZP_02883125.1| seryl-tRNA synthetase [Burkholderia graminis C4D1M]
 gi|170143245|gb|EDT11409.1| seryl-tRNA synthetase [Burkholderia graminis C4D1M]
          Length = 431

 Score = 61.0 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 37/243 (15%), Positives = 81/243 (33%), Gaps = 15/243 (6%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDL-FHIAEDGSGVIFWHRKG--WKIFQ 277
           G       E+ ++    +   E +DH  +   + L F      SG  F   +G   ++ +
Sbjct: 114 GRDEADNVEVRRWGTPRQFDFEVKDHVDVGAPLGLDFETGAKLSGARFTMLRGQIARLHR 173

Query: 278 TLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFA 335
            L  +M      +  Y EI TP +++  +   +G    +  +MF V+         +   
Sbjct: 174 ALAQFMIDTHTQQHGYTEIYTPYIVNPEILYGTGQLPKFADDMFRVEKGGGENTVTQYLI 233

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAH 392
               +           +     LP++L      +R+E         G++R   F + +  
Sbjct: 234 S--TSEISLTNTVRDSIVEGNALPIKLTAHSPCFRSEAGSYGRDTRGMIRQHQFDKVEMV 291

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIM 448
                E  ++   ++     +I +       ++ L T              +W  A+N  
Sbjct: 292 QIVAPETSYDALEQMVGHAETILQKLELPYRVITLCTGDMGFSATKTYDLEVWLPAQNTY 351

Query: 449 KGV 451
           + +
Sbjct: 352 REI 354


>gi|83746913|ref|ZP_00943960.1| Seryl-tRNA synthetase [Ralstonia solanacearum UW551]
 gi|207723628|ref|YP_002254026.1| seryl-trna synthetase protein [Ralstonia solanacearum MolK2]
 gi|300703435|ref|YP_003745037.1| serine tRNA synthetase; also charges selenocystein tRNA with serine
           [Ralstonia solanacearum CFBP2957]
 gi|83726498|gb|EAP73629.1| Seryl-tRNA synthetase [Ralstonia solanacearum UW551]
 gi|206588831|emb|CAQ35793.1| seryl-trna synthetase protein [Ralstonia solanacearum MolK2]
 gi|299071098|emb|CBJ42409.1| serine tRNA synthetase; also charges selenocystein tRNA with serine
           [Ralstonia solanacearum CFBP2957]
          Length = 438

 Score = 61.0 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 37/228 (16%), Positives = 77/228 (33%), Gaps = 18/228 (7%)

Query: 242 EKRDHRKLAREMDL-FHIAEDGSGVIFWHRKG--WKIFQTLISYMRRKI--KDDYEEINT 296
             +DH  L   + L F +A   SG  F   KG   ++ + L  +M      +  Y E   
Sbjct: 135 AVKDHVDLGAGLGLDFDVAAKLSGSRFAVLKGPVARLHRALAQFMLDTHTQEHGYTETYV 194

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVK------CADDTIKDLRTFALKPMNCPGHVAVFNH 350
           P +++    + +G    +  ++F V          +  + +  F L P        +   
Sbjct: 195 PYIVNAASMRGTGQLPKFEEDLFRVPRKMGQAAEGEAGEHVENFYLIPTAEVPLTNLVRD 254

Query: 351 GLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
            + S   LP++ A     +R+E         G++R   F + +       +  F     +
Sbjct: 255 EIVSGDALPMKFAAHSPCFRSEAGSYGKDTRGMIRQHQFDKVEMVQIVHPDTSFEALDTM 314

Query: 408 HNLIISIYKD----FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
            +   +I +     F    +          +     +W  A+N  + +
Sbjct: 315 THHAENILRKLELPFRTVVLCTGDMGFGSTKTYDIEVWIPAQNTYREI 362


>gi|268319357|ref|YP_003293013.1| hypothetical protein FI9785_874 [Lactobacillus johnsonii FI9785]
 gi|262397732|emb|CAX66746.1| hisS [Lactobacillus johnsonii FI9785]
          Length = 428

 Score = 60.6 bits (145), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 73/425 (17%), Positives = 137/425 (32%), Gaps = 63/425 (14%)

Query: 265 VIFWHRKGWK--------IFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
           +     KG           ++ + S  R   K  +Y EI TP   +  ++ +S       
Sbjct: 1   MKVQRPKGTVDILPGESGSWEKVESIARNFFKRANYREIRTPSFENYEVFSRSSGET--- 57

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL--PVRLAEFGSVYRNEP 373
           +++ + +  D   K  R  AL+P    G V  +        ++  P  +    + +R E 
Sbjct: 58  SDVVSKEMYDFNDKGGRHIALRPEGTAGVVRAYVENKLYGPDVVKPFSVYYIDNTFRYER 117

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
             +     R R F Q     F +   + +   +   +   +  + G +   + +++    
Sbjct: 118 PQA----GRQREFHQIGVESFGSDSPLADV--ETLMMAHDLLAELGVKNYELHINSLGNA 171

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDR-------INTGVLLGEGAF--YGPKFEYILK 484
           +V  +A  D   N    V D +   SQ R       I       +  F    PK    L 
Sbjct: 172 QV-REAYHDALVNYFTPVKDQLSEDSQRRLSQNPLRILDSKDERDKKFLPNAPKIVDYLD 230

Query: 485 DAIGRDWQCGTI---QVDFNLPSRFNAFYV--NSHSEKCHPVMIHRAVFGSIERFIG--- 536
           D    +++  T    Q+  N     +               ++  + ++ S    +G   
Sbjct: 231 DESRENFKIITDMLEQLGINYVMDDDLVRGLDYYTGIIFEFMVEDKNLWESATTILGGGR 290

Query: 537 --IMIENFKG-------------NLPLWLSPIQA----------IVTTITSSAVEYAQEI 571
              ++E F G              L L L                +T I +     A E+
Sbjct: 291 YNHLVEEFDGPETPAVGFGIGEERLMLVLKEQNPDLFQEEGIDFFITNIGAGTEFKAVEV 350

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
           A  L+    S + D   + +  + R+        +I  G KE     + I+R     T  
Sbjct: 351 ARSLREQGFSAQYDVDQKKLKQQFRKADRVHATFVITLGAKELENGVLNIKRLSDGKTID 410

Query: 632 VSLLD 636
           +SL D
Sbjct: 411 LSLED 415


>gi|114558177|ref|XP_001148285.1| PREDICTED: seryl-tRNA synthetase isoform 4 [Pan troglodytes]
 gi|114558179|ref|XP_001148840.1| PREDICTED: seryl-tRNA synthetase, cytoplasmic isoform 9 [Pan
           troglodytes]
          Length = 514

 Score = 60.6 bits (145), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 57/165 (34%), Gaps = 11/165 (6%)

Query: 271 KGWKIF--QTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
           KG  +F  Q LI Y +R      Y  I TP  + + + Q+      +   ++ V      
Sbjct: 197 KGVLVFLEQALIQYALRTLGSRGYIPIYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGSE 256

Query: 328 IKDLRTFALKP---MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLM 381
             D  ++  K     +     A+         +LP++ A   + +R E         G+ 
Sbjct: 257 KSDDNSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGRDTRGIF 316

Query: 382 RVRGFTQDDAHVFCTKEQ--MFNECLKIHNLIISIYKDFGFEKIM 424
           RV  F + +  V+ +      +    ++       Y+  G    +
Sbjct: 317 RVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHI 361


>gi|92118621|ref|YP_578350.1| histidyl-tRNA synthetase [Nitrobacter hamburgensis X14]
 gi|91801515|gb|ABE63890.1| histidyl-tRNA synthetase [Nitrobacter hamburgensis X14]
          Length = 526

 Score = 60.6 bits (145), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 46/291 (15%), Positives = 100/291 (34%), Gaps = 27/291 (9%)

Query: 370 RNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST 429
           R + +G       +     +    +   E +     +   L    +  F   ++  +L  
Sbjct: 221 RKDETGDFTVGANLSRSQANTIFSYVMSEPVQILREQYERLGQDGFVTFATREVHRRLQD 280

Query: 430 RP-----EKRVGSDALWDDAENIMKGVLDTIKNSSQD----RINTGVLLGEGAFYGPKFE 480
                      G + +     + ++ + + ++++  +    +I+T V+ G   + GP +E
Sbjct: 281 LQALDVLMYEFGRNPISKQGIDELRAITEIVRSAGYNEDRIKIDTSVIRGLEYYTGPVYE 340

Query: 481 YIL----KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
             L    KD  GR  + G++        R++        E   PV       G   R   
Sbjct: 341 VELLLETKDEKGRPVRFGSVGGGG----RYDGLVSRFRGE---PVPATGFSLGVS-RLQA 392

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRN--ETINYK 594
            +     G L     P   +VT        Y + +A+ L++  +  E    N   ++  +
Sbjct: 393 ALT--MLGKLDTKPQPGPVVVTVFGGEIAGYQKMVAD-LRNAGIRAELYLGNPKHSLGQQ 449

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           ++    +  P  II G  E +   + I+   +      S+ D    L K++
Sbjct: 450 MKYADKRHSPCAIIQGSDEKASGKVQIKDLIAGA-GLTSIEDRTEYLKKQA 499


>gi|22299095|ref|NP_682342.1| seryl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
 gi|30173151|sp|Q8DIN0|SYS_THEEB RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|22295277|dbj|BAC09104.1| seryl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
          Length = 430

 Score = 60.6 bits (145), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 33/243 (13%), Positives = 73/243 (30%), Gaps = 21/243 (8%)

Query: 222 GTAWNTQQELTQY-LYFLEESEKRDHRKLAREMDLFHIAED----GSGVIFWHRKGWKIF 276
           G       E+ ++   +      + H  +   + L+ +        S  +     G  + 
Sbjct: 119 GRDETDNVEVRRWGEEYKPTYPCQPHWDIGTRLGLWDVERSVKVAQSRFVTLLGLGAALE 178

Query: 277 QTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFA 335
           + LI +M     +  Y E+  P +++      +G    +    F     D          
Sbjct: 179 RALIQFMLDSHRERGYVEVLPPLLVNTASLTGTGQLPKFAEESFRCADDD--------LW 230

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAH 392
           L P        ++   + +  +LP+    +   +R E         GL+R+  F + +  
Sbjct: 231 LIPTAEVPVTNLYRDEILAADQLPIYHCAYTPCFRREAGSYGKDTRGLIRLHQFNKVELV 290

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENIM 448
            F   E    E   +      I +       +++L T              +W  A    
Sbjct: 291 KFVHPETSAAEHEALVADAEFILQALKLPYRVIELCTGDLGFAAMKCYDLEVWLPAAGCY 350

Query: 449 KGV 451
           + +
Sbjct: 351 REI 353


>gi|301767668|ref|XP_002919248.1| PREDICTED: seryl-tRNA synthetase, cytoplasmic-like [Ailuropoda
           melanoleuca]
          Length = 513

 Score = 60.6 bits (145), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 57/165 (34%), Gaps = 11/165 (6%)

Query: 271 KGWKIF--QTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
           KG  +F  Q LI Y +R      Y  I TP  + + + Q+      +   ++ V      
Sbjct: 196 KGVLVFLEQALIQYALRTLGSRGYTPIYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGSE 255

Query: 328 IKDLRTFALKP---MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLM 381
             D  ++  K     +     A+         +LP++ A   + +R E         G+ 
Sbjct: 256 KSDDNSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGRDTRGIF 315

Query: 382 RVRGFTQDDAHVFCTKEQ--MFNECLKIHNLIISIYKDFGFEKIM 424
           RV  F + +  V+ +      +    ++       Y+  G    +
Sbjct: 316 RVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEDFYQSLGIPYHI 360


>gi|291165779|gb|EFE27827.1| serine--tRNA ligase [Filifactor alocis ATCC 35896]
          Length = 423

 Score = 60.6 bits (145), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 32/236 (13%), Positives = 83/236 (35%), Gaps = 22/236 (9%)

Query: 220 IYGTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWK 274
           I+G      +E+ ++    +   E + H  +  ++++          GS    +   G +
Sbjct: 113 IHGETDEDNKEVRKWGEVPKFDFEAKAHWDIGTDLNILDFDRGSKITGSRFTLYRDLGAR 172

Query: 275 IFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           + +++I++       ++ Y E+  P + +   +  +G    +  +MF ++  D       
Sbjct: 173 LERSIINFFLNTHTAENGYTEMLPPFIANARSFIGTGQLPKFEEDMFRLEGLD------- 225

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQD 389
            + L P        +    +    +L  +   +   +R E   +     GL+R   F + 
Sbjct: 226 -YYLVPTAEVPVTNIHRDEIMKAEDLTTKYCSYTPCFRAEAGSAGRDTRGLIRQHQFQKV 284

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALW 441
           +   F   E  + E   +     S+ +  G    +V++ +              +W
Sbjct: 285 ELVKFTKPEDSYAELETLVQDAESVLQKLGLPYRVVQICSGDLGFTAAFKYDLEVW 340


>gi|227538734|ref|ZP_03968783.1| histidine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300]
 gi|227241243|gb|EEI91258.1| histidine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300]
          Length = 461

 Score = 60.6 bits (145), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 15/89 (16%), Positives = 43/89 (48%), Gaps = 1/89 (1%)

Query: 556 IVTTITSSAVE-YAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
           ++      ++E +   + N L+   +++E   +   +  ++     K+IP +++ G++E 
Sbjct: 373 LLIVNFEKSIEAFTLPLLNRLRQAGIAVELYPQAVKLKKQMSYADDKRIPYVLLVGEEEV 432

Query: 615 SERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +   + ++   S   QK+S  +   +L+K
Sbjct: 433 NTGQLSLKNMNSGEQQKLSEQEITALLSK 461


>gi|226330729|ref|ZP_03806247.1| hypothetical protein PROPEN_04649 [Proteus penneri ATCC 35198]
 gi|225201524|gb|EEG83878.1| hypothetical protein PROPEN_04649 [Proteus penneri ATCC 35198]
          Length = 290

 Score = 60.6 bits (145), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 69/191 (36%), Gaps = 17/191 (8%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + +  +M     +   Y+E+  P +++      +G    +  ++F  K  ++    
Sbjct: 31  ARLHRAITQFMLNLHTEEHGYQEMYVPYLVNHATLYGTGQLPKFSEDLFHTKPLEEEA-- 88

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
              +AL P        +    +    +LP+++      +R+E         GL+R+  F 
Sbjct: 89  ESQYALIPTAEVPVTNMVRDVILEEDDLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFD 148

Query: 388 QDD----AH---VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDAL 440
           + +    AH        E++     K+  L+   Y+        +   +R         +
Sbjct: 149 KVELVQIAHPEKSMEALEELTGHAEKVLQLLNLPYRKVVLCTGDIGFGSRKTY---DLEV 205

Query: 441 WDDAENIMKGV 451
           W  A+N  + +
Sbjct: 206 WVPAQNTYREI 216


>gi|258647930|ref|ZP_05735399.1| serine--tRNA ligase [Prevotella tannerae ATCC 51259]
 gi|260851769|gb|EEX71638.1| serine--tRNA ligase [Prevotella tannerae ATCC 51259]
          Length = 424

 Score = 60.6 bits (145), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 38/292 (13%), Positives = 88/292 (30%), Gaps = 19/292 (6%)

Query: 143 HEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMK 202
            ++A+   +      K  + + I       L  + E            T  +++  K  +
Sbjct: 40  RKEAQAQLDELLNRIKT-LSKHIGDLMKQGLKEEAEKTKGEVSSLKSKTQTLEETMKQAQ 98

Query: 203 VAGAYWRGDSNRPMLSRI-YGTAWNTQQELTQYLYFLEESEKR-DHRKLAREMDLFHIA- 259
                            +  G   N    + +        E    H +LA++ +L     
Sbjct: 99  EKRTELLYQIPNVPYEEVPEGKDANDNIIVKEDGKMTSIPENPLPHWELAKKYNLIDFDL 158

Query: 260 ---EDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYR 315
                G+G   +  +G  + + LI++ +    K  Y EI  P V++            Y 
Sbjct: 159 GVKISGAGFPVYIGQGAHLQRALINFFLDEARKAGYTEIMPPIVVNA--------ASGYG 210

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP-- 373
                 K       ++    L P        ++   +   + LP++   +   +R E   
Sbjct: 211 TGQLPDKEGQMYHCEVDDLYLIPTAEVPVTNIYRDVILEEKNLPIKNCAYTECFRREAGS 270

Query: 374 -SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
               + GL R+  F++ +       E       ++ + +  + +       +
Sbjct: 271 YGKDVRGLNRLHEFSKIELVRIDKPEHSKQSHQEMLDHVEGLLQKLELPYHI 322


>gi|229062098|ref|ZP_04199423.1| Histidyl-tRNA synthetase 2 [Bacillus cereus AH603]
 gi|228717250|gb|EEL68925.1| Histidyl-tRNA synthetase 2 [Bacillus cereus AH603]
          Length = 476

 Score = 60.6 bits (145), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 75/466 (16%), Positives = 151/466 (32%), Gaps = 66/466 (14%)

Query: 231 LTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWK--------IFQTLISY 282
              Y   +   +  +       + L    E+   +     +G +        ++Q +   
Sbjct: 21  HHGYNTLVPTVQTVEAGVFLFLLRLKQFEEEL-NMSIQIPRGTQDILPGSVELWQYIEGQ 79

Query: 283 MRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPM-N 340
            R   +  +Y+EI TP        +          ++   +      +  R+  L+P   
Sbjct: 80  ARDICRRYNYKEIRTPIF---EHTELFLRGVGDTTDIVQKEMYSFQDRGERSLTLRPEGT 136

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
            P   +   + +      P +L   G ++R E   +     R R F Q       + +  
Sbjct: 137 APVVRSYVENKMFGDATQPTKLYYIGQMFRYERPQA----GRYRQFVQFGIEAIGSNDPA 192

Query: 401 FNECLKIHNLIISIYKDFG----------------FEKIMVKLSTRPEKRVG---SDALW 441
            +   ++  L +  Y+  G                 +     L    E R+G   SD   
Sbjct: 193 IDA--EVIALAVEFYRGMGLKNIKVVLNSLGDAASRQAHRDSLIAHFEPRIGEFCSDCQS 250

Query: 442 DDAENIMKGVLDTIKNSSQDRINT-----GVLLGEGAFYGPK-----------FEYILKD 485
              +N ++ +LD  K+ + + ++T       L  + A Y  K           FE     
Sbjct: 251 RLEKNPLR-ILDCKKDRNHELMSTAPSITEYLNEDSAVYYDKVQELLTMMDVPFEKDPNL 309

Query: 486 AIGRDWQCGTIQVDFNLPSRFNAFYVNSHS--------EKCHPVMIHRAVFGSIERFIGI 537
             G D+   T+    +    F A    S          E   P M       SIER I  
Sbjct: 310 VRGLDYYQHTVFEIMSEAEGFGAITTLSGGGRYNGLVQEIGGPEMPGIGFAMSIERLIMA 369

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           + +     LP+    I   V  +   A + A +IA  L+   L++E D+ +  +  + + 
Sbjct: 370 L-KAENIELPIE-HSIDCYVVALGEKAKDQAAKIAFDLRKAGLAVEKDYLDRKMKAQFKS 427

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
                   + + G+ E  +  I ++   +   ++V+L      + +
Sbjct: 428 ADRLNAKYVAVLGEDELDKGIINLKDMATGGQEEVALDVFASYVAE 473


>gi|213026917|ref|ZP_03341364.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. 404ty]
          Length = 268

 Score = 60.6 bits (145), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 21/155 (13%), Positives = 53/155 (34%), Gaps = 6/155 (3%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M     +   Y E   P +++      +G    +  ++F  +  ++   D
Sbjct: 101 ARMHRALSQFMLDLHTEQHGYSENYVPYLVNHDTLYGTGQLPKFAGDLFHTRPLEEEA-D 159

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
              +AL P        +    +    +LP+++      +R+E         GL+R+  F 
Sbjct: 160 SSNYALIPTAEVPLTNLVRDEIIDEDQLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFD 219

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           + +       E       ++      + +  G   
Sbjct: 220 KVEMVQIVRPEDSMAALEEMTGHAEKVLQLLGLPY 254


>gi|205830242|sp|Q30PA9|SYA_SULDN RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
          Length = 849

 Score = 60.6 bits (145), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 74/201 (36%), Gaps = 16/201 (7%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFS 115
             +E +  +  R      HS  H++   +  +  +     G ++E     +DF   +  S
Sbjct: 534 DEVEAVV-DISRGEITKHHSATHLLHAVLFDVLGDHISQAGSLVEASRLRFDFSHPKAIS 592

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           ++ELA+IE+++   I R      + +S ++A++     +   K          + V +  
Sbjct: 593 NEELAEIERRVNYEIMRGIRANTEVMSIDEAKKSGAKAQFGEKY--------GDEVRVVS 644

Query: 176 QGE-WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
            G+   + C G HV ++  +  F    +         +    +  + G A        + 
Sbjct: 645 FGDASIEFCGGVHVENSANIGSFIITKESG-----VSAGVRRIEAVCGNAAFNYFSEQRE 699

Query: 235 LYFLEESEKRDHRKLAREMDL 255
           L    E E ++   LA    L
Sbjct: 700 LLREVEHEVKNLDILAGVARL 720


>gi|166712549|ref|ZP_02243756.1| seryl-tRNA synthetase [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 426

 Score = 60.6 bits (145), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 63/188 (33%), Gaps = 15/188 (7%)

Query: 273 WKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M      +  YEE N P +++      +G    +  ++F  +       +
Sbjct: 171 ARLHRALAQFMLDLHVGEHGYEETNVPLLVNADSMLGTGQLPKFEDDLFQTEV-----GE 225

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
            R + + P +      +    +     LP+R+      +R E         G++R   F 
Sbjct: 226 SRRYLI-PTSEVPLTNIVRDEIIDAERLPLRMTAHSMCFRAEAGSGGRDTRGMIRQHQFE 284

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +    C  E    E  ++      + +  G     V L T              +W  
Sbjct: 285 KVELVTACAPEDSDAEHQRMTRCAEVVLEQLGLPYRKVLLCTGDMGFSAIKTYDLEVWLP 344

Query: 444 AENIMKGV 451
           ++N  + +
Sbjct: 345 SQNTYREI 352


>gi|73959371|ref|XP_866304.1| PREDICTED: similar to seryl-tRNA synthetase isoform 8 [Canis
           familiaris]
          Length = 516

 Score = 60.6 bits (145), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 57/165 (34%), Gaps = 11/165 (6%)

Query: 271 KGWKIF--QTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
           KG  +F  Q LI Y +R      Y  I TP  + + + Q+      +   ++ V      
Sbjct: 199 KGVLVFLEQALIQYALRTLGSRGYTPIYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGSE 258

Query: 328 IKDLRTFALKP---MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLM 381
             D  ++  K     +     A+         +LP++ A   + +R E         G+ 
Sbjct: 259 KSDDNSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGRDTRGIF 318

Query: 382 RVRGFTQDDAHVFCTKEQ--MFNECLKIHNLIISIYKDFGFEKIM 424
           RV  F + +  V+ +      +    ++       Y+  G    +
Sbjct: 319 RVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEDFYQSLGIPYHI 363


>gi|325117657|emb|CBZ53209.1| tRNA synthetase Gly, related [Neospora caninum Liverpool]
          Length = 716

 Score = 60.6 bits (145), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 19/106 (17%), Positives = 40/106 (37%), Gaps = 2/106 (1%)

Query: 540 ENFKGNLPLWLSPIQAIVTTIT--SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           E      P  ++P + I+  I+   S  +  Q   +   +  +S + D    +I  +   
Sbjct: 588 ERCYMAFPAIIAPTKCIILPISSNPSFADLLQRARDGCVARGISAKVDASTASIGKRYAR 647

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +     P  I        + S+ +R   S    +V L DA+ ++ +
Sbjct: 648 NDEVGTPFAITVDFDSLKDDSVTVRERDSMEQIRVPLADAVDLVAR 693


>gi|289523031|ref|ZP_06439885.1| serine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC BAA-1850]
 gi|289503574|gb|EFD24738.1| serine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC BAA-1850]
          Length = 430

 Score = 60.6 bits (145), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 37/223 (16%), Positives = 74/223 (33%), Gaps = 21/223 (9%)

Query: 242 EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEIN 295
           E + H +L  +M L          GS        G ++ + LI++M         Y E  
Sbjct: 139 EPKPHWELGEKMGLMDFEAGIKLAGSRFTVLRGNGARLARALINFMLDLHTREHGYLEFE 198

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
            P +++      +G    +  +++  +  D          L P        +    +   
Sbjct: 199 PPFIVNSKTMTGTGQLPKFANDLYHCESDD--------LWLIPTAEVPLTNMHAEEILDE 250

Query: 356 RELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
             LP+    +   +R E       + G++R   F + +    CT E  ++E  K+     
Sbjct: 251 DVLPLYYTAYTPCFRREAGSHGRDVRGMLRQHQFDKVELVKICTPETSYDELEKLTQNAE 310

Query: 413 SIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENIMKGV 451
            + K  G    +V L T              +W  ++N  + +
Sbjct: 311 EVLKRLGLPYRVVCLCTGDMGFAASKTYDLEVWLPSQNTYREI 353


>gi|229152592|ref|ZP_04280781.1| Alanyl-tRNA synthetase [Bacillus cereus m1550]
 gi|228630853|gb|EEK87493.1| Alanyl-tRNA synthetase [Bacillus cereus m1550]
          Length = 880

 Score = 60.6 bits (145), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 30/145 (20%), Positives = 61/145 (42%), Gaps = 10/145 (6%)

Query: 55  REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQP 113
           ++ +++ I     RS  V  H+  H++ +A++ +        G  +  +   +DF     
Sbjct: 547 KDAAVKAIIDTKNRSSVVKNHTATHLLHQALKDVLGTHVNQAGSLVTSERLRFDFSHFGQ 606

Query: 114 FSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTL 173
             +DEL +IE+ + E I           + E+A+E+        K          + V +
Sbjct: 607 VQADELEKIERMVNEKIWESIDVEISQKAIEEAKEMGAMALFGEKY--------GDVVRV 658

Query: 174 YRQGEW-FDLCRGPHVRSTGQVKKF 197
            + G++  +LC G HV +T  +  F
Sbjct: 659 VQVGDYSLELCGGCHVDNTASIGIF 683


>gi|325267938|ref|ZP_08134587.1| alanine--tRNA ligase [Kingella denitrificans ATCC 33394]
 gi|324980624|gb|EGC16287.1| alanine--tRNA ligase [Kingella denitrificans ATCC 33394]
          Length = 873

 Score = 60.6 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 39/165 (23%), Positives = 68/165 (41%), Gaps = 14/165 (8%)

Query: 36  KKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           K AV     G V      V +  S EI    D R+  +  HS  H+M +A++ +      
Sbjct: 525 KAAVHGQF-GAVVSGRLKVGDAVSAEI--DNDIRNSIMRNHSVTHLMHKALRDVLGTHVE 581

Query: 95  AIGPIIEDGF-YYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESK 153
             G +       +D    Q  S++E+A++E+++   I  + P   + +S E A++     
Sbjct: 582 QKGSLQNAELTRFDISHPQGISAEEIAEVERRVNAAIIANVPVKVETMSIEDAQKSGAMM 641

Query: 154 KEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
               K          + V +   G++  +LC G HV  TG +  F
Sbjct: 642 LFGEKY--------GDFVRVITMGDYSTELCGGTHVARTGDIGFF 678


>gi|304437508|ref|ZP_07397466.1| serine--tRNA ligase [Selenomonas sp. oral taxon 149 str. 67H29BP]
 gi|304369558|gb|EFM23225.1| serine--tRNA ligase [Selenomonas sp. oral taxon 149 str. 67H29BP]
          Length = 423

 Score = 60.6 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 36/251 (14%), Positives = 79/251 (31%), Gaps = 25/251 (9%)

Query: 210 GDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWH 269
            D       R  GT          +    +     D  + A+               F+ 
Sbjct: 115 KDETENPEVRRCGTPRTFDFTPKAHWDIGDALGILDAERAAKVTGARFT--------FYK 166

Query: 270 RKGWKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
             G ++ +  I++M     +   Y E+  P ++++     +G    +  +MF ++  D  
Sbjct: 167 GLGARLERACINFMMDLHAEKHGYTEMLAPYIVNEASMIGTGQLPKFAEDMFKLEGLD-- 224

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVR 384
                 + L P             +    +LP     + + +R E   +     GL+R  
Sbjct: 225 ------YYLVPTAEVPTTNYHRDEILDAEQLPEYYTSYTACFRAEAGSAGRDTRGLIRQH 278

Query: 385 GFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDAL 440
            F + +   F T E  ++E   +      + K       +++L T              +
Sbjct: 279 QFNKVELIKFVTPETSWDELESMVTAAEDVLKILELPYRVIQLCTGDMSFTSAKTYDIEV 338

Query: 441 WDDAENIMKGV 451
           W  A++  + +
Sbjct: 339 WMPAQDKYREI 349


>gi|256847119|ref|ZP_05552565.1| histidyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
 gi|256715783|gb|EEU30758.1| histidyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
          Length = 430

 Score = 60.6 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 64/433 (14%), Positives = 134/433 (30%), Gaps = 65/433 (15%)

Query: 265 VIFWHRKGWK--------IFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYR 315
           + +   KG           ++ +    R+      Y+ I TP      ++ +S       
Sbjct: 1   MRYQRPKGTADILPGDSAKWEYVEKLARKIFHQYGYQGIRTPLFESYDIFARS---AGDT 57

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK--SYRELPVRLAEFGSVYRNEP 373
           +++   +  D   K  R  AL+P    G V  FN           P ++   G ++R E 
Sbjct: 58  SDVVTKEMYDFHDKGDRHIALRPEGTAGVVRAFNENKLYGPEYPKPYKVYYVGPMFRYER 117

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
             S     R R F Q     F +        +++  + + ++   G   + V ++T  ++
Sbjct: 118 PQS----GRQREFHQIGVEAFGSDNPA--TDVEVIAMALQLFTKLGLTDLRVAVNTLGDQ 171

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVL-------LGEGAF--YGPKF-EYIL 483
           +   D       N +K   D +   SQ+R+    L         +  F    P   +Y+ 
Sbjct: 172 KSRDDYRTALI-NYLKPHYDELSEDSQERLEKNPLRVLDSKDPRDQKFVADAPSILDYLT 230

Query: 484 KDAIGRDWQCGTI----------------QVDFNLPSRFNAFYVNSHSEKCHPVM----- 522
            +A  R  Q   +                 +D+   + F            +  +     
Sbjct: 231 PEANARFEQVKQMLDVLGIDYVVDPDMVRGLDYYNHTIFEVMVKAKSLGNGYTTICGGGR 290

Query: 523 ------------IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQE 570
                       +    FG  E  + +++ +    LP     +   V  I       + +
Sbjct: 291 YSGLVEQLGGPDLSGVGFGIGEERLLLLLNDEGIQLPTDDH-LDVYVVGIGDDTNLESLQ 349

Query: 571 IANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
           +    +   L  + DF       + R        +++  G +E  E ++ ++   +    
Sbjct: 350 LVQAARHAGLIADRDFMGRKPKAQFRTADRMHARVVLTVGKRELEEGNVHLKVMATGKEV 409

Query: 631 KVSLLDAIPILTK 643
            V L D +     
Sbjct: 410 SVKLADLLNDFAN 422


>gi|160887095|ref|ZP_02068098.1| hypothetical protein BACOVA_05111 [Bacteroides ovatus ATCC 8483]
 gi|237721366|ref|ZP_04551847.1| seryl-tRNA synthetase [Bacteroides sp. 2_2_4]
 gi|293369930|ref|ZP_06616501.1| serine--tRNA ligase [Bacteroides ovatus SD CMC 3f]
 gi|299148593|ref|ZP_07041655.1| serine--tRNA ligase [Bacteroides sp. 3_1_23]
 gi|156107506|gb|EDO09251.1| hypothetical protein BACOVA_05111 [Bacteroides ovatus ATCC 8483]
 gi|229449162|gb|EEO54953.1| seryl-tRNA synthetase [Bacteroides sp. 2_2_4]
 gi|292634976|gb|EFF53497.1| serine--tRNA ligase [Bacteroides ovatus SD CMC 3f]
 gi|298513354|gb|EFI37241.1| serine--tRNA ligase [Bacteroides sp. 3_1_23]
          Length = 424

 Score = 60.6 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 68/198 (34%), Gaps = 16/198 (8%)

Query: 245 DHRKLAREMDLFHIA----EDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQV 299
            H +LA++ DL          G+G   +  KG ++ + LI++ +    K  Y EI  P V
Sbjct: 143 PHWELAKKYDLIDFDLGVKITGAGFPVYKGKGAQLQRALINFFLDEARKSGYTEIMPPTV 202

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           ++            Y       K       ++    L P        ++   +   ++LP
Sbjct: 203 VNA--------ASGYGTGQLPDKEGQMYHCEVDDLYLIPTAEVPVTNIYRDVILEEKQLP 254

Query: 360 VRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +    +   +R E       + GL R+  F++ +       E       ++ + +  + +
Sbjct: 255 IMNCAYTQCFRREAGSYGKDVRGLNRLHEFSKVELVRIDKPEHSKQSHQEMLDHVEGLLQ 314

Query: 417 DFGFEKIMVKLSTRPEKR 434
                  +++L       
Sbjct: 315 KLELPYRILRLCGGDMSF 332


>gi|300087729|ref|YP_003758251.1| seryl-tRNA synthetase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
 gi|299527462|gb|ADJ25930.1| seryl-tRNA synthetase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
          Length = 413

 Score = 60.6 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 44/236 (18%), Positives = 77/236 (32%), Gaps = 22/236 (9%)

Query: 220 IYGTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE--DGSGVIFWHRK--GWK 274
            YGT          Y    E     + H +L  ++D+         SG  F+  K  G +
Sbjct: 102 PYGTGEADNVVRRYYGEKREFEFTPKSHWELGEQLDIIDFERGVKISGSRFYVLKNAGAR 161

Query: 275 IFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           + ++LIS           Y E+  P ++ Q     SG+   +  N++             
Sbjct: 162 LQRSLISLFLDIHTRQHGYSEMYLPFMVKQESLFGSGNLPKFADNLYR--------DAND 213

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQD 389
              + P        +    + +  ELP     + + +R E         G+ R   F + 
Sbjct: 214 DLWMVPTAEVPLTNLHRDEILASSELPKHYCAYTACFRREKMSAGKDTRGIKRGHQFDKV 273

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALW 441
           + + F T E    E  K+ N   +I K       +V+L T              +W
Sbjct: 274 ELYKFTTPESSNQELEKLLNDAEAIAKALELPYRIVELCTGDIGFASSKSYDIEIW 329


>gi|188584655|ref|YP_001916200.1| seryl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|229890228|sp|B2A2Z8|SYS_NATTJ RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|179349342|gb|ACB83612.1| seryl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 422

 Score = 60.6 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 29/252 (11%), Positives = 75/252 (29%), Gaps = 27/252 (10%)

Query: 209 RGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFW 268
             D +  ++ ++       +     +    E     D ++  +      +   G      
Sbjct: 115 DDDEDNQVVKQV--GEPVKKDYFKPHWEVAENLNLLDFKRAGKVTGTRFVNYVGDA---- 168

Query: 269 HRKGWKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADD 326
                ++ + LI +M      +  Y E+  P + ++     +G    +  +M+ ++    
Sbjct: 169 ----ARLERALIDFMIDVHVTEHGYVEMMPPFIANRDSMTGTGQLPKFEDDMYKLEDM-- 222

Query: 327 TIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRV 383
                  + L P        ++   +     LP  L  F   +R E         GL+R 
Sbjct: 223 ------EYFLIPTAEVTLTNLYRDEILPGDFLPRYLVAFTPCFRKEAGAHGRDTRGLIRQ 276

Query: 384 RGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDA 439
             F + +   F   E+ + E   +      + +       +  + T              
Sbjct: 277 HQFNKVEMVKFVEPEKSYQELDSLVANAERVLQLLELPYQISLMCTGDLGFAAAKKYDLE 336

Query: 440 LWDDAENIMKGV 451
           +W  + +  + +
Sbjct: 337 VWLPSYDTYREI 348


>gi|118444620|ref|YP_878353.1| alanyl-tRNA synthetase [Clostridium novyi NT]
 gi|205830036|sp|A0Q151|SYA_CLONN RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|118135076|gb|ABK62120.1| alanyl-tRNA synthetase [Clostridium novyi NT]
          Length = 879

 Score = 60.6 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 27/161 (16%), Positives = 68/161 (42%), Gaps = 11/161 (6%)

Query: 46  KVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGF 104
           +V + S  + +  +  +  +   ++    HS  H++  A++ +  E     G  + ED  
Sbjct: 538 EVTEGSIKLEDEVLLEVDRKRRENIG-KNHSATHLLHAALRKVVGEHVHQSGSYVDEDKL 596

Query: 105 YYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES 164
            +DF   +  + +EL ++E  + + I      + + ++ E+A+              L  
Sbjct: 597 RFDFTHFESLTHEELKKVEDLVNDTIESVWDVVTKEMTIEEAK--------NSGAMALFD 648

Query: 165 IPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKFFKLMKVA 204
               + V + + G++  +LC G H+ + G++  F  + +  
Sbjct: 649 EKYGDKVRVVKMGDFSTELCGGTHISNVGKIGLFKIVSESG 689


>gi|254455521|ref|ZP_05068950.1| alanyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211]
 gi|207082523|gb|EDZ59949.1| alanyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211]
          Length = 888

 Score = 60.6 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 35/164 (21%), Positives = 78/164 (47%), Gaps = 10/164 (6%)

Query: 45  GKVCDLSDPVREGSIEI-ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-D 102
           GKV + S  +++ ++E+ I  E         HS  H++ E+++ +  +     G ++E  
Sbjct: 535 GKVINGSIQLKD-NVELKINVERRDDTRAY-HSATHLLHESLRRVLGKHVTQKGSLVEPS 592

Query: 103 GFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE--LFESKKEAYKVE 160
              +DF   +P  ++E+ +IE  +  ++++ S    + ++ ++A E        E Y  E
Sbjct: 593 RLRFDFSHMKPIQTEEIDKIEGFVNNMVSKKSDVKTRLMTPDEAVENGALALFGEKYGEE 652

Query: 161 ILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVA 204
           +       ++ + +      +LC G HVR+TG + KF  + + +
Sbjct: 653 VRVLSMGDDDGSYF----STELCGGTHVRNTGDIGKFKIVSQSS 692


>gi|297181247|gb|ADI17441.1| histidyl-tRNA synthetase [uncultured Rhodospirillales bacterium
           HF0070_31K06]
          Length = 414

 Score = 60.6 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 56/418 (13%), Positives = 128/418 (30%), Gaps = 64/418 (15%)

Query: 269 HRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
             +  +  +++I   R   +   +EE+ TP      +++++       +++   +    T
Sbjct: 14  LPEAMRAHRSVIGCARDVAERYGFEEMATPIFESSDVFRRT---LGDTSDIVTKEMYTFT 70

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
            K      L+P N  G    F     +    P++    G ++R+E         R+R F 
Sbjct: 71  TKGGEEITLRPENTAGVARCFISEGLAQST-PLKFFYAGPMFRHERPQK----GRLRQFH 125

Query: 388 QD--DAHVFCTKEQMFNECLKIHNLIISI---------YKDFGFEKIMVKLSTRPEKRVG 436
           Q   +   F   +           ++  +             G  +              
Sbjct: 126 QIGIETVGFAGPQADIEIIAAGARILSELGLQGKTVLQLNTLGDSESRSVYREALVTYFT 185

Query: 437 S--DALWDDAENIM----------KGVLDTIKNSSQDRINTGVLLGEGAFY--------- 475
              D L  ++ + +          K   D    +        +     AF+         
Sbjct: 186 KRVDELSQESRDRLNRNPLRILDSKNEGDRSVVADAPSFTNHLNEESRAFFEQVQEGLTA 245

Query: 476 -GPKFEYILKDAIGRDWQCGTI----------QVDFNLPSRFNAFYVNSHSEKCHPVMIH 524
            G  FE   +   G D+   T           Q       R++   + +      P +  
Sbjct: 246 LGIAFELNERLVRGLDYYGHTAFEFTTTELGAQGAVMAGGRYDGL-IETMGGPKTPGIGW 304

Query: 525 RAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIET 584
                 +ER + ++    +G+ P    P    +  + ++A   A  +A  L++  L ++ 
Sbjct: 305 A---AGVER-LAML----RGDPPPARRP--VALVPLGAAAEARAFVLAEELRASGLRVDV 354

Query: 585 DFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            F    +  +++          ++ GD E ++    +R       ++V L      L+
Sbjct: 355 GFSGN-LGRRMKRADRMNAAAAVLIGDDELAKDVATVRDMDGGEQEEVPLGALRERLS 411


>gi|238763314|ref|ZP_04624278.1| Seryl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
 gi|238698413|gb|EEP91166.1| Seryl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
          Length = 430

 Score = 60.6 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 62/188 (32%), Gaps = 10/188 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M     +   Y E   P +++      +G    +  ++F  K  ++   D
Sbjct: 170 ARMHRALAQFMLDLHTEKHGYLETYVPYLVNHATLYGTGQLPKFGGDLFHTKPLEEE-SD 228

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
             T+AL P        +    +     LP+++      +R+E         GL+R+  F 
Sbjct: 229 SSTYALIPTAEVPVTNLVRDEILEEESLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFD 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E       ++      + +        V L T              +W  
Sbjct: 289 KVEMVQITRPEDSMAALEELTGHAEKVLQLLELPYRKVLLCTGDMGFGSSKTYDLEVWLP 348

Query: 444 AENIMKGV 451
           A++  + +
Sbjct: 349 AQDTYREI 356


>gi|206890029|ref|YP_002247872.1| seryl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM 11347]
 gi|238065108|sp|B5YGU2|SYS_THEYD RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|206741967|gb|ACI21024.1| seryl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM 11347]
          Length = 424

 Score = 60.6 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 37/233 (15%), Positives = 74/233 (31%), Gaps = 21/233 (9%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAEDG----SGVIFWHRKGWKIF 276
           G   N   E+ ++        E  +H  +   + +           S        G ++ 
Sbjct: 117 GKDENENVEIRRWGEPSHFDFEPMNHWDIGEILGIIDFERASKIAGSRFAIMKGMGARLE 176

Query: 277 QTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFA 335
           + LI++M     +  Y E+  P ++++     +G    +  ++F +            F 
Sbjct: 177 RALINFMLDLHTQKGYIEVLPPILVNKVSMTGTGQLPKFEEDLFKIVDP--------EFY 228

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAH 392
           L P        +    + S  ELP+    +   +R E       + GL+R   F + +  
Sbjct: 229 LIPTAEVPVTNIHREEILSEDELPIYYVSYTPCFRKEAGSHGKDVRGLIRQHQFNKVELV 288

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALW 441
            F   E  + E   +      + K  G    +V L T              +W
Sbjct: 289 KFVKPEDSYEELESLTRDAEEVLKMLGLPYRVVALCTGDLGFASAKTYDIEVW 341


>gi|78778092|ref|YP_394407.1| alanyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251]
 gi|78498632|gb|ABB45172.1| alanyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251]
          Length = 851

 Score = 60.6 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 74/201 (36%), Gaps = 16/201 (7%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFS 115
             +E +  +  R      HS  H++   +  +  +     G ++E     +DF   +  S
Sbjct: 536 DEVEAVV-DISRGEITKHHSATHLLHAVLFDVLGDHISQAGSLVEASRLRFDFSHPKAIS 594

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           ++ELA+IE+++   I R      + +S ++A++     +   K          + V +  
Sbjct: 595 NEELAEIERRVNYEIMRGIRANTEVMSIDEAKKSGAKAQFGEKY--------GDEVRVVS 646

Query: 176 QGE-WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
            G+   + C G HV ++  +  F    +         +    +  + G A        + 
Sbjct: 647 FGDASIEFCGGVHVENSANIGSFIITKESG-----VSAGVRRIEAVCGNAAFNYFSEQRE 701

Query: 235 LYFLEESEKRDHRKLAREMDL 255
           L    E E ++   LA    L
Sbjct: 702 LLREVEHEVKNLDILAGVARL 722


>gi|323490022|ref|ZP_08095243.1| alanyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
 gi|323396318|gb|EGA89143.1| alanyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
          Length = 874

 Score = 60.6 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 63/160 (39%), Gaps = 16/160 (10%)

Query: 40  AVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP- 98
           +V +N      +  + + S++       R   V  H+  H++ +A++ +        G  
Sbjct: 536 SVRVN------TGELTKTSVQAQVDASERRHTVKNHTATHLLHQALKDVLGTHVNQAGSY 589

Query: 99  IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYK 158
           +  D   +DF      + +EL  IE+ + E +         Y + ++A+E+        K
Sbjct: 590 VGPDRLRFDFSHFGQVTKEELETIEQIVNEKVWDGIAVQTGYYNLQEAKEMGAMALFGEK 649

Query: 159 VEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
                     + V +   G +  +LC G HV +T ++  F
Sbjct: 650 Y--------GDVVRVVEIGGYSLELCGGVHVLNTSEIGLF 681


>gi|303232994|ref|ZP_07319674.1| serine--tRNA ligase [Atopobium vaginae PB189-T1-4]
 gi|302480921|gb|EFL44001.1| serine--tRNA ligase [Atopobium vaginae PB189-T1-4]
          Length = 429

 Score = 60.6 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 63/188 (33%), Gaps = 17/188 (9%)

Query: 272 GWKIFQTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G ++ + LI++ +    K  ++E   P + +      +G    +  ++F V         
Sbjct: 172 GAQMERALINFFIDMHAKAGFKEWWPPVLTNYDSLFGTGQLPKFDEDLFHVSD------- 224

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFT 387
                L P        +    +    +LP+    F   +R E   +     G++RV  F 
Sbjct: 225 --NLYLIPTAEVMLTNLHRDEVLDAAQLPLLYTAFTPCFREEAGSAGRDTRGIIRVHEFD 282

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALWDD 443
           + +   F T E   NE   +     +  +  G    +V L T              +W  
Sbjct: 283 KVEMVKFATPENSMNELELMVGEAEACLQTLGLPYRVVSLCTGDIGFSACKCYDLEVWLP 342

Query: 444 AENIMKGV 451
           + N  K +
Sbjct: 343 SYNNYKEI 350


>gi|227890124|ref|ZP_04007929.1| histidyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
 gi|227849299|gb|EEJ59385.1| histidyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
          Length = 428

 Score = 60.6 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 72/425 (16%), Positives = 136/425 (32%), Gaps = 63/425 (14%)

Query: 265 VIFWHRKGWK--------IFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
           +     KG           ++ + S  R   K  +Y EI TP   +  ++ +S       
Sbjct: 1   MKVQRPKGTVDILPGESGSWEKVESIARNFFKRANYREIRTPSFENYEVFSRSSGET--- 57

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL--PVRLAEFGSVYRNEP 373
           +++ + +  D   K  R  AL+P    G V  +        ++  P  +    + +R E 
Sbjct: 58  SDVVSKEMYDFNDKGGRHIALRPEGTAGVVRAYVENKLYGPDVVKPFSVYYIDNTFRYER 117

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
             +     R R F Q     F +   + +   +   +   +  + G +   + +++    
Sbjct: 118 PQA----GRQREFHQIGVESFGSDSPLADV--ETLMMAHDLLAELGVKNYELHINSLGNA 171

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDR-------INTGVLLGEGAF--YGPKFEYILK 484
           +V  +A  D   N    V D +   SQ R       I       +  F    PK    L 
Sbjct: 172 QV-REAYHDALVNYFTPVKDQLSEDSQRRLSQNPLRILDSKDERDKKFLPNAPKIVDYLD 230

Query: 485 DAIGRDWQCGTI---QVDFNLPSRFNAFYV--NSHSEKCHPVMIHRAVFGSIERFIG--- 536
           D   + ++  T    Q+  N     +               ++  + ++ S    +G   
Sbjct: 231 DESRKSFKTITDMLEQLGINYVMDDDLVRGLDYYTGIIFEFMVEDKNLWESATTILGGGR 290

Query: 537 --IMIENFKG-------------NLPLWLSPIQA----------IVTTITSSAVEYAQEI 571
              ++E F G              L L L                +T I +     A E+
Sbjct: 291 YNHLVEEFDGPETPAVGFGIGEERLMLVLKEQNPDLFQEEGIDFFITNIGAGTEFKAVEV 350

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
           A  L+    S + D   + +  + R+        +I  G KE     + I+R        
Sbjct: 351 ARSLREQGFSAQYDVDQKKLKQQFRKADRVHATFVITLGAKELENGVLNIKRLSDGKIID 410

Query: 632 VSLLD 636
           +SL D
Sbjct: 411 LSLED 415


>gi|223936711|ref|ZP_03628621.1| seryl-tRNA synthetase [bacterium Ellin514]
 gi|223894562|gb|EEF61013.1| seryl-tRNA synthetase [bacterium Ellin514]
          Length = 433

 Score = 60.6 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 83/234 (35%), Gaps = 15/234 (6%)

Query: 222 GTAWNTQQELTQYLYFL-EESEKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIF 276
           G       E+  +   L  E + + H +L   + L   A      GSG + +   G ++ 
Sbjct: 118 GKTAEENPEIRTWGEKLSYEFKPKSHIELCERLKLVDFARGTKLSGSGFLLYTNWGARLE 177

Query: 277 QTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           + LI ++      +  Y E++ P ++++      G +  +    +AV+  +D       +
Sbjct: 178 RALIQFLLDLHTTQHGYTEVSPPYIVNRDCMVGVGQFPKFVDQAYAVREGEDNSTLGSLY 237

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDA 391
            + P        +    + + +ELP+    +   +R E   +     G++RV  F + + 
Sbjct: 238 LV-PTAEAPVANIHRGEILAEKELPIFYCAYSPCFRAEAGAAGLGTRGMIRVHQFDKVEL 296

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALW 441
                 E  + E  K+      + +       ++ L T              +W
Sbjct: 297 IKLVRPEVGYEELEKMVGNAEKVLQLLDLHYRVINLCTGDMGFASAKTYDIEVW 350


>gi|170744612|ref|YP_001773267.1| seryl-tRNA synthetase [Methylobacterium sp. 4-46]
 gi|238688057|sp|B0UD12|SYS_METS4 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|168198886|gb|ACA20833.1| seryl-tRNA synthetase [Methylobacterium sp. 4-46]
          Length = 435

 Score = 60.6 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 38/245 (15%), Positives = 75/245 (30%), Gaps = 14/245 (5%)

Query: 220 IYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDG--SGVIFWHRKG--WKI 275
             G   +   EL ++         R H +L     L         SG  F   KG   ++
Sbjct: 114 PEGRDEHDNVELRRFEGRGRAESGRQHFELGEAAGLMDFEAAARLSGSRFVVLKGRLARL 173

Query: 276 FQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
            + L  +M         Y E+  P ++       +     +R + FA +           
Sbjct: 174 ERALGQFMLDLHTAEHGYTEVAPPLLVRDEAMFGTAQLPKFRDDQFAAQPGAVEPGAPGR 233

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDD 390
           + + P        +    + S  ELP+R       +R E   +     G++R   FT+ +
Sbjct: 234 WLI-PTAEVPLTNLVRESILSEDELPLRFTALTPCFRAEAGAAGRDTRGMLRQHQFTKVE 292

Query: 391 AHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAEN 446
                  EQ   E  ++     ++ +       ++ L T              +W   + 
Sbjct: 293 LVSITAPEQSAEEHERMLACAEAVLRRLDLPYRVMTLCTGDMGFASQKTYDIEVWLPGQG 352

Query: 447 IMKGV 451
             + +
Sbjct: 353 TYREI 357


>gi|110003912|emb|CAK98252.1| seryl-trna synthetase protein [Spiroplasma citri]
          Length = 422

 Score = 60.6 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 46/351 (13%), Positives = 129/351 (36%), Gaps = 26/351 (7%)

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           +   ++ ++++  R   F       + + +  E   ++ K++   ++ +K+  TL  + +
Sbjct: 8   VENFDEVIKKLNRRHDDFSYLQDIKKLSVQRRELIGKSEKLKEKRNLESKKVGTLIAEKK 67

Query: 179 WFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRI------YGTAWNTQQELT 232
             ++ +   + +T + +      ++     +  +   +   I       G   N   E+ 
Sbjct: 68  DQEVQKNKKLINTIKQEIEIIDGQLDEVEEKIKAILEVTPNIPDDSVPSGEDKNDNVEIR 127

Query: 233 QYLYFLEESEKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYM-RRKI 287
           ++       + ++H ++A ++DL          GS  + +   G K+ + L+++M     
Sbjct: 128 KWGKISNHQKVKEHWEVATKLDLIDFDRGTKISGSRFVVYKGMGAKLERALMNFMLDEHA 187

Query: 288 KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAV 347
           K  Y EI  P ++   +   +G+   ++ +++ +        +     L P +      +
Sbjct: 188 KRGYIEIEPPILVQPQIMYGTGNLPKFKEDLYYI--------EKDNLYLIPTSEVPVTNL 239

Query: 348 FNHGLKSYRELPVRLAEFGSVYRNE---PSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
           +   +    +LP+    +   +R E         G++R+  F + +   F T+E  F E 
Sbjct: 240 YREEILEKDQLPIYHTAYTPCFRQESGSAGRDTKGIIRLHQFKKVEMVKFTTEEASFEEL 299

Query: 405 LKIHNLIISIYKDFGFEKI----MVKLSTRPEKRVGSDALWDDAENIMKGV 451
            K+     +I +                     +     +W   +N  + +
Sbjct: 300 EKMVLDAENILQLLEIPYRVILLCSGDMGFSSTKTYDVEVWMPGQNKYREI 350


>gi|71898430|ref|ZP_00680602.1| Histidyl-tRNA synthetase, class IIa [Xylella fastidiosa Ann-1]
 gi|71731743|gb|EAO33802.1| Histidyl-tRNA synthetase, class IIa [Xylella fastidiosa Ann-1]
          Length = 466

 Score = 60.6 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 34/214 (15%), Positives = 75/214 (35%), Gaps = 19/214 (8%)

Query: 436 GSDALWDDAENIMKGVLDTIKNSSQ----DRINTGVLLGEGAFYGPKFEYILKDAIGRDW 491
           GS  +       ++ VL  +          R+N  +  G   + G  +E  L +      
Sbjct: 260 GSHDMLRQGVAELREVLTLVNVLGVPEHAYRLNFSIARGLDYYTGTVYETALINH----H 315

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI-GIMIENFKGNLPLWL 550
           Q G+I        R+     +    K   V I   +     +     +I+          
Sbjct: 316 QIGSICSGG----RYENLANHYTQSKLPGVGISIGLTRLFWQLRDAGLIDGIAE------ 365

Query: 551 SPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           S +QA+V  +  + ++ A +IA  L+   ++ E     + ++ + +  S   I  +++ G
Sbjct: 366 SSVQAMVVLMDEATLDDALDIARCLRIGGINTEVQMEAKKLSKQFQYASRAGIRFVVLAG 425

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           D E +   + ++        ++   +    L  E
Sbjct: 426 DDERARGVVAVKDLTREQQFEIPREELASTLQVE 459


>gi|304382010|ref|ZP_07364563.1| serine--tRNA ligase [Prevotella marshii DSM 16973]
 gi|304336808|gb|EFM03031.1| serine--tRNA ligase [Prevotella marshii DSM 16973]
          Length = 429

 Score = 60.6 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 63/187 (33%), Gaps = 16/187 (8%)

Query: 246 HRKLAREMDLFHIA----EDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQVL 300
           H  L R+ +L          G+G   +  K  ++ + L ++ +    K  Y E+  P V+
Sbjct: 144 HWDLCRKYNLIDFDLGVKITGAGFPVYIGKMARLQRALEAFFLDEARKSGYLEVQPPFVV 203

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           ++           Y       K       +     L P        +F   +    +LP+
Sbjct: 204 NRDS--------GYGTGQLPDKEGQMYHCETDDLYLIPTAEVPVTNMFRDVILDESDLPI 255

Query: 361 RLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           +   + + +R E       + GL R+  F + +       E   N   ++ + + S+ + 
Sbjct: 256 KRCAYSACFRREAGSYGKDVRGLNRLHQFDKVELVRIDRPEHSANSLREMLDHVESLCRK 315

Query: 418 FGFEKIM 424
                 +
Sbjct: 316 LELPYRI 322


>gi|257866231|ref|ZP_05645884.1| seryl-tRNA synthetase [Enterococcus casseliflavus EC30]
 gi|257873255|ref|ZP_05652908.1| seryl-tRNA synthetase [Enterococcus casseliflavus EC10]
 gi|257800189|gb|EEV29217.1| seryl-tRNA synthetase [Enterococcus casseliflavus EC30]
 gi|257807419|gb|EEV36241.1| seryl-tRNA synthetase [Enterococcus casseliflavus EC10]
          Length = 425

 Score = 60.6 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 32/223 (14%), Positives = 79/223 (35%), Gaps = 21/223 (9%)

Query: 242 EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRRK--IKDDYEEIN 295
           E + H ++A E+ +          GS  +++   G ++ + L ++M  +   +  Y E+ 
Sbjct: 136 EPKPHWEIAEELGILDFERGAKVSGSRFVYYKGLGARLERALYNFMLDQHVYEHGYTEMI 195

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
           TP +++      +G +  ++ ++F +   D T+         P         +   +   
Sbjct: 196 TPYIVNSQAMFGTGQFPKFKEDVFQLADTDLTLI--------PTAEVPLTNYYQGEILEQ 247

Query: 356 RELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
            +LP         +R+E   +     GL+R+  F + +   F   +  + E  K+     
Sbjct: 248 EQLPAYFTALSPSFRSEAGSAGRDTRGLIRLHQFNKVEMVKFSDADHSYEELEKMTANAE 307

Query: 413 SIYKDFGFEKI----MVKLSTRPEKRVGSDALWDDAENIMKGV 451
            I +                     +     +W  A+ + + +
Sbjct: 308 DILQKLNLPYRVLSLCTGDMGFSAAKTYDLEVWIPAQEMYREI 350


>gi|293366424|ref|ZP_06613102.1| alanine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|291319458|gb|EFE59826.1| alanine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|329735187|gb|EGG71479.1| alanine--tRNA ligase [Staphylococcus epidermidis VCU045]
          Length = 876

 Score = 60.6 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 63/152 (41%), Gaps = 10/152 (6%)

Query: 55  REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQP 113
           +   +E    ++ R L    HS  H++  A++ +  +     G ++E     +DF    P
Sbjct: 545 QNAKVEARVNKEDRRLIQKNHSATHLLHAALKEVLGDHVNQAGSLVEPERLRFDFSHFGP 604

Query: 114 FSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTL 173
            + +E+  +E+++ E I R      Q +S E+A+ +        K          + V +
Sbjct: 605 MTQEEINLVERRVNEEIWRAIDVRIQEMSIEEAKSIGAMALFGEKY--------GDIVRV 656

Query: 174 YRQGEW-FDLCRGPHVRSTGQVKKFFKLMKVA 204
                +  +LC G HV +T ++  F  + +  
Sbjct: 657 VNMAPFSIELCGGIHVNNTAEIGLFKIVSESG 688


>gi|260776356|ref|ZP_05885251.1| seryl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
 gi|260607579|gb|EEX33844.1| seryl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
          Length = 435

 Score = 60.6 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 38/248 (15%), Positives = 84/248 (33%), Gaps = 16/248 (6%)

Query: 220 IYGTAWNTQQELTQYLY-FLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKG--WK 274
             G   N   E++++      + E +DH  L    D   F  A   +G  F   KG   +
Sbjct: 114 PDGKDENENVEISRWGEPKSYDFEVKDHVDLGEMGDGLDFASATKITGARFIIMKGQFAR 173

Query: 275 IFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL- 331
           + + +  +M     +   Y E+  P +++      +G    +  ++F  +   + + D  
Sbjct: 174 LHRAIAQFMLDLHTEEHGYTEMYVPYLVNSDSLFGTGQLPKFGEDLFHTEPLTEKVNDEE 233

Query: 332 -RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
            R  +L P        +    +    +LP+++      +R+E         GL+R+  F 
Sbjct: 234 PRKLSLIPTAEVPVTNMVRDTIVDEADLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFD 293

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E+      ++      + +        V L T              +W  
Sbjct: 294 KVELVQITKPEESMAALEELTGHAEKVLQLLELPYRKVVLCTGDMGFGARKTYDLEVWVP 353

Query: 444 AENIMKGV 451
           A+   + +
Sbjct: 354 AQETYREI 361


>gi|119576771|gb|EAW56367.1| seryl-tRNA synthetase, isoform CRA_c [Homo sapiens]
          Length = 447

 Score = 60.6 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 57/165 (34%), Gaps = 11/165 (6%)

Query: 271 KGWKIF--QTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
           KG  +F  Q LI Y +R      Y  I TP  + + + Q+      +   ++ V      
Sbjct: 130 KGVLVFLEQALIQYALRTLGSRGYIPIYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGSE 189

Query: 328 IKDLRTFALKP---MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLM 381
             D  ++  K     +     A+         +LP++ A   + +R E         G+ 
Sbjct: 190 KSDDNSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGRDTRGIF 249

Query: 382 RVRGFTQDDAHVFCTKEQ--MFNECLKIHNLIISIYKDFGFEKIM 424
           RV  F + +  V+ +      +    ++       Y+  G    +
Sbjct: 250 RVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHI 294


>gi|313125296|ref|YP_004035560.1| seryl-tRNA synthetase [Halogeometricum borinquense DSM 11551]
 gi|312291661|gb|ADQ66121.1| seryl-tRNA synthetase [Halogeometricum borinquense DSM 11551]
          Length = 460

 Score = 60.6 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 41/252 (16%), Positives = 89/252 (35%), Gaps = 15/252 (5%)

Query: 241 SEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKG--WKIFQTLISYMRRKIKD-DYEEIN 295
            E   H  L  E+D+  F      +G  F+  KG   ++   LI +M    ++  Y ++ 
Sbjct: 139 DEVIPHYDLGEELDILDFERGAKVTGGGFYFAKGDGARLEHALIQFMMDVHREQGYVDLF 198

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
            P  ++      +G +  +  + + +  A+   +D     L P        ++   +   
Sbjct: 199 PPIPVNSQSMTGTGQFPKFTEDAYRIGKANGKERDDDDLWLCPTAEVPVTNMYRDEILLD 258

Query: 356 RELPVRLAEFGSVYRNEPSG---SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
            +LPV+   +   +R E         G++RV  F + +   F   E  + +  ++ +   
Sbjct: 259 DDLPVKHQAYTPNFRREAGEHGTETRGIVRVHQFNKVEMVNFVRPENSYEQFEELLDEAE 318

Query: 413 SIYKDFGFEKIMVKLSTRPEKRV----GSDALW---DDAENIMKGVLDTIKNSSQDRINT 465
            + +       ++++ T              +W   DD E+  +     ++ SS      
Sbjct: 319 EVLRRLELPYRILEMCTGDLGFTQAKKYDIEVWAPGDDMEDGPEEGGRWLEVSSVSNFED 378

Query: 466 GVLLGEGAFYGP 477
                 G  Y P
Sbjct: 379 FQARRAGLRYRP 390


>gi|114558193|ref|XP_513616.2| PREDICTED: seryl-tRNA synthetase isoform 10 [Pan troglodytes]
          Length = 447

 Score = 60.6 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 57/165 (34%), Gaps = 11/165 (6%)

Query: 271 KGWKIF--QTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
           KG  +F  Q LI Y +R      Y  I TP  + + + Q+      +   ++ V      
Sbjct: 130 KGVLVFLEQALIQYALRTLGSRGYIPIYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGSE 189

Query: 328 IKDLRTFALKP---MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLM 381
             D  ++  K     +     A+         +LP++ A   + +R E         G+ 
Sbjct: 190 KSDDNSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGRDTRGIF 249

Query: 382 RVRGFTQDDAHVFCTKEQ--MFNECLKIHNLIISIYKDFGFEKIM 424
           RV  F + +  V+ +      +    ++       Y+  G    +
Sbjct: 250 RVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHI 294


>gi|16801950|ref|NP_472218.1| seryl-tRNA synthetase [Listeria innocua Clip11262]
 gi|30173196|sp|Q926Z9|SYS_LISIN RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|16415425|emb|CAC98116.1| seryl-trna synthetase [Listeria innocua Clip11262]
          Length = 427

 Score = 60.6 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 36/244 (14%), Positives = 87/244 (35%), Gaps = 22/244 (9%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIF 276
           G + +   E+ ++    E   E + H  L  ++D+          GS  +F+ + G ++ 
Sbjct: 115 GESEDDNVEIRKWGEVREFDFEPKAHWDLGTDLDILDFENAAKVTGSRFVFYKKLGARLE 174

Query: 277 QTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           + LI++M     +   YEE+  P ++++     +G    +  + F +        +   +
Sbjct: 175 RALINFMMDLHSNEHGYEEMLPPYMVNRASMTGTGQLPKFEEDAFLI--------EAEDY 226

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDA 391
            L P             +    +LP +   F + +R+E   +     GL+R   F + + 
Sbjct: 227 FLIPTAEVPVTNYHREDILKAEDLPRKYTAFSACFRSEAGSAGRDTRGLIRQHQFNKVEL 286

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENI 447
             F   E  +    K+      + +       ++ + T              +W  + + 
Sbjct: 287 VQFVKPEDSYAALEKLTGCAEEVLRRLELPYRVLSMCTADLGFTAAKKYDLEVWIPSYDS 346

Query: 448 MKGV 451
            + +
Sbjct: 347 YREI 350


>gi|329735738|gb|EGG72019.1| serine--tRNA ligase [Staphylococcus epidermidis VCU028]
          Length = 428

 Score = 60.6 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 51/356 (14%), Positives = 115/356 (32%), Gaps = 32/356 (8%)

Query: 111 EQPFSSDELAQIEKKMQEIIARDSPFLKQYLSH-EKARELFESKKEAYKVEILESIPAKE 169
           E+  S  EL   + K+ + +       ++ +S  E+ +       E    +      A +
Sbjct: 12  EKVKSKIELRGDDPKVVDQVLELDEQRRELISKTEEMKAKRNKVSEEIAQKKRNKEDADD 71

Query: 170 NVTLYRQ-GEWFDLCRGPHVRSTGQVK----KFFKLMKVAGAYWRGDSNRPMLSRIYGTA 224
            +   R  G+              +++    +   L+         D     + + +GT 
Sbjct: 72  VIAEMRHLGDEIKDIDNQLNEVDNKIRDILIRIPNLINEDVPQGDSDEENVEVKK-WGTP 130

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR 284
            + + E   +   +EE +  D  + A+      +             G  + + L++YM 
Sbjct: 131 RDFEFEPKAHWDLVEELKMADFERAAKVSGARFVYLTK--------DGALLERALMNYML 182

Query: 285 RKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
            K   +  Y E+ TPQ+++      +G    +  ++F V        +       P    
Sbjct: 183 TKHTTQHGYTEMMTPQLVNADTMFGTGQLPKFEEDLFKV--------EKEGLYTIPTAEV 234

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQ 399
                +   +     LP       + +R+E   +     GL+R+  F + +       E 
Sbjct: 235 PLTNFYRDEIIQPGVLPELFTAQTACFRSEAGSAGRDTRGLIRLHQFDKVEMVRIVQPED 294

Query: 400 MFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
            ++   ++     +I ++ G     V L T              +W  + N  K +
Sbjct: 295 SWDALEEMTQNAEAILEELGLPYRRVILCTGDIGFSASKTYDLEVWLPSYNDYKEI 350


>gi|319956131|ref|YP_004167394.1| seryl-tRNA synthetase [Nitratifractor salsuginis DSM 16511]
 gi|319418535|gb|ADV45645.1| seryl-tRNA synthetase [Nitratifractor salsuginis DSM 16511]
          Length = 414

 Score = 60.6 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 65/188 (34%), Gaps = 16/188 (8%)

Query: 272 GWKIFQTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G ++   LI++ + R I   +EE   P +++  + + +G    +  ++F V         
Sbjct: 170 GARLQTALINFFLDRNIAAGFEEYAVPFMVNSEMLRGTGQLPKFEEDLFKV--------C 221

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFT 387
                L P        +++  +    ELPV +  +   +R E   +     G++R   F 
Sbjct: 222 DEDLYLIPTAEVPLTNIYHDEILPAEELPVLMTAYSPCFRKEAGSAGRDTRGMIRQHQFA 281

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG----SDALWDD 443
           + +       E+      K+      +  + G     V+L T              +W  
Sbjct: 282 KVEMVAITRPEESDEIFQKMVQQASDLLTELGLPHRWVELCTGDLGFSAARTVDLEVWLP 341

Query: 444 AENIMKGV 451
            +   + +
Sbjct: 342 GQGKYREI 349


>gi|296282871|ref|ZP_06860869.1| seryl-tRNA synthetase [Citromicrobium bathyomarinum JL354]
          Length = 427

 Score = 60.6 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 40/245 (16%), Positives = 78/245 (31%), Gaps = 22/245 (8%)

Query: 220 IYGTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDL-FHIAEDGSGVIF-WHRKG-WKI 275
             G       EL+ +    E   E R+H  +   + L F I  + +G  F + R G  ++
Sbjct: 115 PEGAGEEENVELSTWGEKREFDFEPREHADIGPMLGLDFEIGANIAGARFTFLRGGIARL 174

Query: 276 FQTLISYM--RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
            + L  +M  R+  ++ Y E N P ++       +G    +  ++F          D R 
Sbjct: 175 HRALGQFMLDRQVTENGYLECNPPLLVRDDAVFGTGQLPKFADDLFHTT-------DGRW 227

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE---PSGSLHGLMRVRGFTQDD 390
               P             +     LP+R+      +R+E         G +R   F + +
Sbjct: 228 LI--PTAEVSLTNAVRGHIIEEAHLPLRMTALTPCFRSEAGAAGKDTRGFIRQHQFEKVE 285

Query: 391 AHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAEN 446
                  E    E  ++      + +  G     + L T              +W   + 
Sbjct: 286 LVSIVRPEDSEAEHERMTQCAEGVLQALGLPYRKMLLCTGDMGFGARKTYDLEVWLPGQG 345

Query: 447 IMKGV 451
             + +
Sbjct: 346 AYREI 350


>gi|169350231|ref|ZP_02867169.1| hypothetical protein CLOSPI_00975 [Clostridium spiroforme DSM 1552]
 gi|169293014|gb|EDS75147.1| hypothetical protein CLOSPI_00975 [Clostridium spiroforme DSM 1552]
          Length = 425

 Score = 60.6 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 64/418 (15%), Positives = 135/418 (32%), Gaps = 56/418 (13%)

Query: 269 HRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
                  +Q L   +R    + + +EI TP        +          ++ + +     
Sbjct: 13  LPDKTIKWQMLEQLIRTICANYNVKEIRTPIF---EHTELFNRAVGDTTDVVSKEMYTFN 69

Query: 328 IKDLRTFALKPMNCPGHVAVF-NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
            K  R+  L+P    G    +  + + S  +   +L   G ++R E   +     R R F
Sbjct: 70  DKKGRSITLRPEGTAGVARAYVENKMFSNPDKITKLYYIGPMFRYERPQN----GRQRQF 125

Query: 387 TQD--DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
            Q   +   + +   +  EC+ +   ++      G +  +  L     +    +AL +  
Sbjct: 126 HQFGVEMIGYESP-YLDVECMTMAVTLVEALGLKGVKLHINTLGDEQSREAYRNALKEHF 184

Query: 445 ENIMKGVLDTIKNSSQ----------------------DRINTGVLLGEGAF-------Y 475
              +  +    KN  +                        I+      +  F        
Sbjct: 185 APYLDELCSDCKNRFETNPLRILDCKVDCDHPSMKNAPKTIDYLSETAKEHFNKVCELLD 244

Query: 476 GPKFEYILKDAI--GRDWQCGTIQVDFNLPSRFNAFYVNSH--------SEKCHPVMIHR 525
             + EY L   +  G D+ C T+    +   R  A              SE   P     
Sbjct: 245 DLEIEYELDTNLVRGLDYYCHTVFEVISDDPRLGAGSTVGGGGRYNGLISELNGPEAPGV 304

Query: 526 AVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD 585
                +ER +  M E    +  L        V  + S A + A +I  +L+++  S++ D
Sbjct: 305 GFAFGMERLLIAMDEELSEDEGL-----DVYVMPLGSKAKDLAMQITTMLRANGFSVDMD 359

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +++ ++  + +          +I GD+E  +  + I+   S T   V + + +  +  
Sbjct: 360 YQDRSLKAQFKTVDRMHSHFALIIGDQEVEDEVVNIKCTHSKTQDVVPIENIVAYIEN 417


>gi|220932052|ref|YP_002508960.1| histidyl-tRNA synthetase [Halothermothrix orenii H 168]
 gi|254782333|sp|B8CXE6|SYH_HALOH RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|219993362|gb|ACL69965.1| histidyl-tRNA synthetase [Halothermothrix orenii H 168]
          Length = 419

 Score = 60.6 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 72/415 (17%), Positives = 133/415 (32%), Gaps = 64/415 (15%)

Query: 276 FQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           +Q +    RR     +Y+EI TP      L+Q+     +           D   K  R+ 
Sbjct: 20  WQYIEDTARRIFQMYNYKEIRTPIFEYTELFQRGIGETTDIVEKEMYTFED---KGGRSI 76

Query: 335 ALKPMNCPGHVAVFNHGLKSYREL-PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
            L+P      V  F    K Y ++ P +    G ++R E   +     R R F Q     
Sbjct: 77  TLRPEGTASVVRAF-LEHKIYGQVQPTKYFYIGPMFRYERPQA----GRFRQFHQLGVEA 131

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLD 453
           F + +   +   ++  L + I K  G   + V +       +G         + +K  L+
Sbjct: 132 FGSNDPALDA--EVIALGLDILKRLGLTDVEVFI-----NSIGCPECRARYSDELKQYLE 184

Query: 454 T----IKNSSQDRINTGVLLGEGAFY---------GPKF-------------EYI-LKDA 486
           +    +    + R+N   L                 PK              +     D 
Sbjct: 185 SHQDRLCKDCKARLNKNPLRILDCKNEECSLVIKNAPKILDYLCDNCRVHFEDVQEYLDL 244

Query: 487 IG---RDWQCGTIQVDFNLPSRF----------NAFYVNSHSEKCHPVMIHRAVFGS--- 530
           +G   R        +D+   + F          +A +           + ++++ G    
Sbjct: 245 LGIKYRVDPTLVRGLDYYTNTAFEIKFKELGAQDAIFGGGRYNGLTEEIGNKSIPGIGFA 304

Query: 531 --IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRN 588
             IER I  +  + KG        I   + TI   A   A     LL+   ++ E D+  
Sbjct: 305 VGIERLILAL--DKKGIKLPVNDSIDVYLVTIGERAKRAAFNYTYLLRESGITAEIDYLG 362

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +I  +++          II GD E       ++   +    ++ L + I  + K
Sbjct: 363 RSIKSQMKSADRTGASYTIIIGDSELDSGKATVKNMRTGEQVEIMLANLIEEMQK 417


>gi|109899322|ref|YP_662577.1| alanyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
 gi|123360521|sp|Q15RG5|SYA_PSEA6 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|109701603|gb|ABG41523.1| alanyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
          Length = 865

 Score = 60.6 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 42/188 (22%), Positives = 74/188 (39%), Gaps = 35/188 (18%)

Query: 23  GSDVAESISRSLAK----KAVAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCA 78
           G  +A     +L+K     +V   +NG        VR  +I++             HS  
Sbjct: 519 GKAIAHK-GAALSKLSVGDSVLAKVNG--------VRRHAIKL------------NHSAT 557

Query: 79  HIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFL 137
           H+M  A++SI  E     G ++  D   +DF   +  S +++  +E  + E I  + P  
Sbjct: 558 HLMHAALKSILGEHVNQKGSLVQADRLRFDFSHFEAMSKEQVLAVETMVNEQILANHPLQ 617

Query: 138 KQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKK 196
            Q +  E+A+E         K          ++V +   G +  +LC G HV  TG +  
Sbjct: 618 TQLMGLEQAKEAGAMALFGEKY--------DDDVRVVSMGSFSMELCGGTHVERTGDIGL 669

Query: 197 FFKLMKVA 204
           F  + +  
Sbjct: 670 FKIISESG 677


>gi|325134725|gb|EGC57364.1| alanyl-tRNA synthetase [Neisseria meningitidis M13399]
 gi|325205670|gb|ADZ01123.1| alanyl-tRNA synthetase [Neisseria meningitidis M04-240196]
          Length = 874

 Score = 60.6 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 61/143 (42%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFS 115
            S+     ++ R+  +  HS  H+M +A++ +        G  +  +   +D    Q  +
Sbjct: 544 DSVTAKVDDEIRNANMRNHSATHLMHKALRDVLGRHVEQKGSLVTAESTRFDISHPQAVT 603

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           ++E+A++E+++ E +  +       +S E A++         K          + V + +
Sbjct: 604 AEEIAEVERRVNEAVLANVAVNAAIMSMEDAQKTGAMMLFGEKY--------GDEVRVLQ 655

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G +  +LC G HV  TG +  F
Sbjct: 656 MGGFSTELCGGTHVSRTGDIGLF 678


>gi|298372889|ref|ZP_06982879.1| serine--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058]
 gi|298275793|gb|EFI17344.1| serine--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058]
          Length = 424

 Score = 60.6 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 68/198 (34%), Gaps = 16/198 (8%)

Query: 245 DHRKLAREMDLFHIA----EDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQV 299
            H +LA+  DL          G+G   +  KG ++ + LI++ +       Y EI  P V
Sbjct: 143 PHWELAKRYDLIDFELGVKITGAGFPVYKGKGARLQRALINFFLDEARNAGYLEIEPPYV 202

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           ++            Y       K        +    L P        +F   + + ++LP
Sbjct: 203 VNTDS--------GYGTGQLPDKEGQMYHVTVDDLYLIPTAEVPVTNIFRDVILAEKDLP 254

Query: 360 VRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
            +L  + + +R E       + GL R+  F + +       E  ++   ++   + ++  
Sbjct: 255 CKLTAYSACFRREAGSYGKDVRGLNRLHQFNKVEIVRIDKPEHSYDSLDEMVRYVENLIC 314

Query: 417 DFGFEKIMVKLSTRPEKR 434
                  +++L       
Sbjct: 315 KLELPYRILRLCGGDMSF 332


>gi|260171593|ref|ZP_05758005.1| seryl-tRNA synthetase [Bacteroides sp. D2]
 gi|315919907|ref|ZP_07916147.1| seryl-tRNA synthetase [Bacteroides sp. D2]
 gi|313693782|gb|EFS30617.1| seryl-tRNA synthetase [Bacteroides sp. D2]
          Length = 424

 Score = 60.6 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 68/198 (34%), Gaps = 16/198 (8%)

Query: 245 DHRKLAREMDLFHIA----EDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQV 299
            H +LA++ DL          G+G   +  KG ++ + LI++ +    K  Y EI  P V
Sbjct: 143 PHWELAKKYDLIDFDLGVKITGAGFPVYKGKGAQLQRALINFFLDEARKSGYTEIMPPTV 202

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           ++            Y       K       ++    L P        ++   +   ++LP
Sbjct: 203 VNA--------ASGYGTGQLPDKEGQMYHCEVDDLYLIPTAEVPVTNIYRDVILEEKQLP 254

Query: 360 VRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +    +   +R E       + GL R+  F++ +       E       ++ + +  + +
Sbjct: 255 IMNCAYTQCFRREAGSYGKDVRGLNRLHEFSKVELVRIDKPEHSKQSHQEMLDHVEGLLQ 314

Query: 417 DFGFEKIMVKLSTRPEKR 434
                  +++L       
Sbjct: 315 KLELPYRILRLCGGDMSF 332


>gi|182416712|ref|ZP_02948112.1| histidyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237667747|ref|ZP_04527731.1| histidine--tRNA ligase [Clostridium butyricum E4 str. BoNT E
           BL5262]
 gi|182379437|gb|EDT76931.1| histidyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237656095|gb|EEP53651.1| histidine--tRNA ligase [Clostridium butyricum E4 str. BoNT E
           BL5262]
          Length = 431

 Score = 60.6 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 53/338 (15%), Positives = 108/338 (31%), Gaps = 64/338 (18%)

Query: 355 YREL--PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
           Y +L  P +  + G VYR    G  +   R R F Q D  V   ++        + +L  
Sbjct: 95  YNDLVFPFKRYQIGKVYR----GERNQKGRYREFYQCDIDVIGKEKLSIGNDAWVISLAS 150

Query: 413 SIYKDFGFEKIMVKLSTRPE-----------------------KRVGSDALWDDAENIM- 448
             +K  G      ++S R                          +VG D    + ENI+ 
Sbjct: 151 KAFKSIGLIDYRFQISNRKILKGILSELKIDNDNEVMILIDKYDKVGKDVFSKELENIIG 210

Query: 449 -----------------KGVLDTIKNS--SQDRINTGVLLGEGAFYGPK--------FEY 481
                            K +++ +            G+   +   Y           FE 
Sbjct: 211 TEKSNYINKVLDLNGTNKEIIEELSKLNLENKYFIEGIEELKKVCYTLSMLGVSEEEFEI 270

Query: 482 ILKDAIGRDWQCGTIQVDF---NLPSRFNAFYVNSHS---EKCHPVMIHRAVFGSIERFI 535
            LK   G D+  GT+       N             +      + ++    +   + R  
Sbjct: 271 NLKIIRGLDYYTGTVFETILVGNEGYGSICSGGRYDNLAENYTNNILPGVGISIGLTRLF 330

Query: 536 GIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKI 595
            ++ E    +     + +  ++  I  + +EY  E+ N L+ +   +   F + ++  K+
Sbjct: 331 FVLKEIGFIDKYEMKNKLDYLIIPIGDT-IEYCIEVMNYLQDNGKKVTVYFEDNSLKKKM 389

Query: 596 REHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
              +   I  +I+ G+ E   + + I+   +  ++ V 
Sbjct: 390 NYTNKLGINNVILIGEDEVEMKEVKIKNMITGDSRNVD 427


>gi|187479159|ref|YP_787184.1| seryl-tRNA synthetase [Bordetella avium 197N]
 gi|123514094|sp|Q2KWF5|SYS_BORA1 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|115423746|emb|CAJ50296.1| seryl-tRNA synthetase [Bordetella avium 197N]
          Length = 449

 Score = 60.6 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 39/233 (16%), Positives = 78/233 (33%), Gaps = 24/233 (10%)

Query: 242 EKRDHRKLAREMDL-FHIAEDGSGVIF-WHRKG--WKIFQTLISYMRRKI--KDDYEEIN 295
             RDH  +   + L F  A   SG  F +  +G   ++ + L  +M      +  Y E  
Sbjct: 143 APRDHVAIGEPLGLDFDTAAKLSGARFSFM-RGQMARLHRALAQFMLDLQTGEHGYTECY 201

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKP----------MNCPGHV 345
           TP +++      +G    ++ +MF V               KP           +     
Sbjct: 202 TPYIVNSSTLYGTGQLPKFKDDMFFVTKGGGDDDPKVDEQGKPLAREDQYLISTSEITLT 261

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFN 402
           +V    +     LP+R+      +R+E         G++R   F + +       EQ ++
Sbjct: 262 SVVRDTIVPGDVLPLRMTAHTPCFRSEAGSGGRDTRGMIRQHQFDKVEMVQVANPEQSYD 321

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
              ++      + +  G    ++ L T              +W  A+N  + +
Sbjct: 322 ALEQMVGHAEEVLRRLGLPYRVMLLCTGDMGFGAAKTYDLEVWLPAQNTWREI 374


>gi|42519262|ref|NP_965192.1| histidyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
 gi|46396581|sp|P60916|SYH_LACJO RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|41583550|gb|AAS09158.1| histidyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
 gi|329667228|gb|AEB93176.1| histidyl-tRNA synthetase [Lactobacillus johnsonii DPC 6026]
          Length = 428

 Score = 60.6 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 73/425 (17%), Positives = 137/425 (32%), Gaps = 63/425 (14%)

Query: 265 VIFWHRKGWK--------IFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
           +     KG           ++ + S  R   K  +Y EI TP   +  ++ +S       
Sbjct: 1   MKVQRPKGTVDILPGESGSWEKVESIARNFFKRANYREIRTPSFENYEVFSRSSGET--- 57

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL--PVRLAEFGSVYRNEP 373
           +++ + +  D   K  R  AL+P    G V  +        ++  P  +    + +R E 
Sbjct: 58  SDVVSKEMYDFNDKGGRHIALRPEGTAGVVRAYVENKLYGPDVVKPFSVYYIDNTFRYER 117

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK 433
             +     R R F Q     F +   + +   +   +   +  + G +   + +++    
Sbjct: 118 PQA----GRQREFHQIGVESFGSDSPLADV--ETLMMAHDLLAELGVKNYELHINSLGNA 171

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDR-------INTGVLLGEGAF--YGPKFEYILK 484
           +V  +A  D   N    V D +   SQ R       I       +  F    PK    L 
Sbjct: 172 QV-REAYHDALVNYFTPVKDQLSEDSQRRLSQNPLRILDSKDERDKKFLPNAPKIVDYLD 230

Query: 485 DAIGRDWQCGTI---QVDFNLPSRFNAFYV--NSHSEKCHPVMIHRAVFGSIERFIG--- 536
           D    +++  T    Q+  N     +               ++  + ++ S    +G   
Sbjct: 231 DESRENFKTITDMLEQLGINYVMDDDLVRGLDYYTGIIFEFMVEDKNLWESATTILGGGR 290

Query: 537 --IMIENFKG-------------NLPLWLSPIQA----------IVTTITSSAVEYAQEI 571
              ++E F G              L L L                +T I +     A E+
Sbjct: 291 YNHLVEEFDGPETPAVGFGIGEERLMLVLKEQNPDLFQEEGIDFFITNIGAGTEFKAVEV 350

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQK 631
           A  L+    S + D   + +  + R+        +I  G KE     + I+R     T  
Sbjct: 351 ARSLREQGFSAQYDVDQKKLKQQFRKADRVHATFVITLGAKELENGVLNIKRLSDGKTID 410

Query: 632 VSLLD 636
           +SL D
Sbjct: 411 LSLED 415


>gi|27468219|ref|NP_764856.1| alanyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
 gi|57867101|ref|YP_188758.1| alanyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|251811025|ref|ZP_04825498.1| alanyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
 gi|282875956|ref|ZP_06284823.1| alanine--tRNA ligase [Staphylococcus epidermidis SK135]
 gi|33301694|sp|Q8CSA7|SYA_STAES RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|71153555|sp|Q5HNT2|SYA_STAEQ RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|27315765|gb|AAO04900.1|AE016748_134 alanyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
 gi|57637759|gb|AAW54547.1| alanyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|251805443|gb|EES58100.1| alanyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
 gi|281294981|gb|EFA87508.1| alanine--tRNA ligase [Staphylococcus epidermidis SK135]
          Length = 876

 Score = 60.6 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 63/152 (41%), Gaps = 10/152 (6%)

Query: 55  REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQP 113
           +   +E    ++ R L    HS  H++  A++ +  +     G ++E     +DF    P
Sbjct: 545 QNAKVEARVNKEDRRLIQKNHSATHLLHAALKEVLGDHVNQAGSLVEPERLRFDFSHFGP 604

Query: 114 FSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTL 173
            + +E+  +E+++ E I R      Q +S E+A+ +        K          + V +
Sbjct: 605 MTQEEINLVERRVNEEIWRAIDVRIQEMSIEEAKSIGAMALFGEKY--------GDIVRV 656

Query: 174 YRQGEW-FDLCRGPHVRSTGQVKKFFKLMKVA 204
                +  +LC G HV +T ++  F  + +  
Sbjct: 657 VNMAPFSIELCGGIHVNNTAEIGLFKIVSESG 688


>gi|307265211|ref|ZP_07546770.1| alanyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
 gi|326390157|ref|ZP_08211718.1| alanyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
 gi|306919833|gb|EFN50048.1| alanyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
 gi|325993805|gb|EGD52236.1| alanyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
          Length = 877

 Score = 60.6 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 61/139 (43%), Gaps = 10/139 (7%)

Query: 67  PRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDELAQIEKK 125
            R  A   H+  H++ +A++ I  +     G  + +D   +DF   Q  + +EL QIE +
Sbjct: 555 SRRNAARNHTATHLLHKALKEILGDHVHQAGSLVADDRLRFDFSHYQAVTKEELKQIENR 614

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCR 184
           + E I +      +  ++++A +         K          + V + +  ++  +LC 
Sbjct: 615 VNEKIYQSLNVHIEEKTYDEAVKEGAVALFTEKY--------GDKVRVVKIDDYSMELCG 666

Query: 185 GPHVRSTGQVKKFFKLMKV 203
           G HV++T ++  F  + + 
Sbjct: 667 GTHVKNTNEIGIFKIVSES 685


>gi|296108860|ref|YP_003615809.1| glycyl-tRNA synthetase [Methanocaldococcus infernus ME]
 gi|295433674|gb|ADG12845.1| glycyl-tRNA synthetase [Methanocaldococcus infernus ME]
          Length = 570

 Score = 60.6 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 45/380 (11%), Positives = 119/380 (31%), Gaps = 43/380 (11%)

Query: 278 TLISYM--RRKIKDDYEEI--NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
            +  ++   +K  + ++E+      +L      +              K        +  
Sbjct: 213 EIEYFVHPEKKEHEKFDEVKDLILPLLPAEHQLEGKGIIKMSLGEAVDKGIIRHQT-IAY 271

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGS-VYRNEPSGSLHGLMRVRGFTQDDAH 392
           F  + M     + +    ++  + LP  +A +    +  E      G +   G       
Sbjct: 272 FMAQTMKFLEEIGIDREKIRFRQHLPNEMAHYAIDCWDAEIYTERFGWIECVG------- 324

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
           +    +      +      +S++ +    ++         K VG   ++     +++  L
Sbjct: 325 IADRTDYDLKSHMAHSGEDLSVFVEGEEREVEDYEIELNYKVVGK--IFKKDTKVIESYL 382

Query: 453 DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
             +  S ++++   +            E  + D   + ++     +      R       
Sbjct: 383 KNLGVSDKEKLVKELNEKGE------VEICIGD---KSFKLTNEHLKIEKVKR------V 427

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIENFK--------GNLPLWLSPIQAIV--TTITS 562
              EK  P +I       I+R    ++E+           +L   ++PI+A V       
Sbjct: 428 IKGEKVVPHVI--EPSFGIDRIFYCLLEHSYREEEDRAYLDLKPEIAPIKAYVFPLVNRE 485

Query: 563 SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR 622
              E A+ I ++L+ + +  E D     I  +        +P  I    +   + ++ +R
Sbjct: 486 GMPELAKRIRDMLRENKIIAEYDDSGA-IGRRYMRADEIGVPFCITVDGQTLKDNTVTVR 544

Query: 623 RFGSTTTQKVSLLDAIPILT 642
              +   ++V + + +  L 
Sbjct: 545 DRNTREQERVKIEELVDYLR 564



 Score = 43.6 bits (101), Expect = 0.097,   Method: Composition-based stats.
 Identities = 54/324 (16%), Positives = 98/324 (30%), Gaps = 66/324 (20%)

Query: 256 FHIAEDGSGVIFWHRKGWKIFQTLISYMRRK--IKDDYEEINTPQVLDQHLWQQSGHWDS 313
           F I    +G + +   G  +   +I+  R +  +K+ + EI +P V    + + SGH D+
Sbjct: 21  FEIYGGIAGFVDYGPLGCLLKNNIINKFRERFIVKEGFYEIESPTVTPYEVLKASGHVDN 80

Query: 314 Y---------RANMFAVKCADDTIKD---------------------------------- 330
           +             F      +   D                                  
Sbjct: 81  FTDPIVECKNCLENFRADHIIEEQVDIDTESLSLKELEEVIKKYNIRCPKCGGEFGEVKK 140

Query: 331 -------------LRTFALKPMNCPGHVAVFNHGLKSYRE-LPVRLAEFGSVYRNEPSGS 376
                         R   L+P    G    F    + +R  LP  + + G  YRNE S  
Sbjct: 141 FNLMFVTSIGPGKGRRGFLRPETAQGIFIQFKRLAQFFRNKLPFGVVQIGKSYRNEISPR 200

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLK-----IHNLIISIYKDFGFEKIMVKLSTRP 431
             G++R+R FTQ +   F   E+  +E        I  L+ + ++  G   I + L    
Sbjct: 201 -QGVIRLREFTQAEIEYFVHPEKKEHEKFDEVKDLILPLLPAEHQLEGKGIIKMSLGEAV 259

Query: 432 EKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP-KFEYILKDAIGRD 490
           +K +                L+ I    +       L  E A Y    ++  +       
Sbjct: 260 DKGIIRHQTIAYFMAQTMKFLEEIGIDREKIRFRQHLPNEMAHYAIDCWDAEIYTERFGW 319

Query: 491 WQCGTIQVDFNLPSRFNAFYVNSH 514
            +C  I    +   + +  +    
Sbjct: 320 IECVGIADRTDYDLKSHMAHSGED 343


>gi|256371739|ref|YP_003109563.1| alanyl-tRNA synthetase [Acidimicrobium ferrooxidans DSM 10331]
 gi|256008323|gb|ACU53890.1| alanyl-tRNA synthetase [Acidimicrobium ferrooxidans DSM 10331]
          Length = 854

 Score = 60.6 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 59/147 (40%), Gaps = 11/147 (7%)

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIW-PEVQVAIGPIIEDGFYYDFDKEQPFSSDE 118
            ++  E    L V  H+  H++  A++ +  P V+     +  D   +DF    P + DE
Sbjct: 538 AVVDAERREGLRV-HHTATHLLHWALREVLGPHVKQQGSLVAPDHLRFDFTHWGPLTPDE 596

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE 178
           + +IE+++   I RDS    + +  ++A           +          + V +   GE
Sbjct: 597 IEEIERRVAAEIIRDSVVTVELMDRDEAIRRGAVAFFGDRY--------GDVVRVVHAGE 648

Query: 179 -WFDLCRGPHVRSTGQVKKFFKLMKVA 204
              +LC G H+   G++       + +
Sbjct: 649 SSVELCGGTHLDRLGRIGHLRITSESS 675


>gi|162660624|gb|EDQ48461.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 315

 Score = 60.6 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 38/225 (16%), Positives = 80/225 (35%), Gaps = 15/225 (6%)

Query: 242 EKRDHRKLAREMDL-FHIAEDGSGVIFWHRKG--WKIFQTLISYMRRKIKD--DYEEINT 296
           E +DH  + + + L F +    SG  F   KG   ++ + L  +M     D   Y E   
Sbjct: 37  EVKDHVDVGQPLGLDFDMGVKLSGSRFTVMKGPIARLHRALAQFMIDLQTDSHGYTECYV 96

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVK---CADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           P  ++    + +G    +  ++FA K      + + D     L P             + 
Sbjct: 97  PYAVNADSLKGTGQLPKFEGDLFAAKKGGQDGEPVPDNAALYLIPTAEVPLTNFVRDVVV 156

Query: 354 SYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
           +  +LP++L      +R+E         G++R   F + +       E+ +    ++   
Sbjct: 157 AEDQLPIKLTAHSPCFRSEAGSYGRDTRGMIRQHQFDKVEMVQIVHPEKSYEALEEMTGH 216

Query: 411 IISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
             ++ +  G    ++ L T              +W  A+N  + +
Sbjct: 217 AEAVLQKLGLPYRVMSLCTGDMGFGAAKTYDLEVWLPAQNTYREI 261


>gi|163801972|ref|ZP_02195868.1| seryl-tRNA synthetase [Vibrio sp. AND4]
 gi|159174113|gb|EDP58921.1| seryl-tRNA synthetase [Vibrio sp. AND4]
          Length = 435

 Score = 60.6 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 25/190 (13%), Positives = 63/190 (33%), Gaps = 11/190 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + +  +M     +   Y E+  P +++      +G    +  ++F  +   + + D
Sbjct: 172 ARLHRAIAQFMLDLHTEEHGYTEMYVPYLVNSDSLFGTGQLPKFGKDLFHTEPLAEKVND 231

Query: 331 L--RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRG 385
              R  +L P        +    +    +LP+++      +R+E         GL+R+  
Sbjct: 232 EEPRKLSLIPTAEVPVTNLVRDTISDEADLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQ 291

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALW 441
           F + +       E   N   ++      + +        V L T              +W
Sbjct: 292 FDKVELVQITKPEDSMNALEELTGHAEKVLQLLELPYRKVVLCTGDMGFGARKTYDLEVW 351

Query: 442 DDAENIMKGV 451
             A+   + +
Sbjct: 352 VPAQETYREI 361


>gi|160897351|ref|YP_001562933.1| seryl-tRNA synthetase [Delftia acidovorans SPH-1]
 gi|238687207|sp|A9BYK5|SYS_DELAS RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|160362935|gb|ABX34548.1| seryl-tRNA synthetase [Delftia acidovorans SPH-1]
          Length = 438

 Score = 60.6 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 38/225 (16%), Positives = 80/225 (35%), Gaps = 15/225 (6%)

Query: 242 EKRDHRKLAREMDL-FHIAEDGSGVIFWHRKG--WKIFQTLISYMRRKIKD--DYEEINT 296
           E +DH  + + + L F +    SG  F   KG   ++ + L  +M     D   Y E   
Sbjct: 140 EVKDHVDVGQPLGLDFDMGVKLSGSRFTVMKGPIARLHRALAQFMIDLQTDSHGYTECYV 199

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVK---CADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           P  ++    + +G    +  ++FA K      + + D     L P             + 
Sbjct: 200 PYAVNADSLKGTGQLPKFEGDLFAAKKGGQDGEPVPDNAALYLIPTAEVPLTNFVRDVVV 259

Query: 354 SYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
           +  +LP++L      +R+E         G++R   F + +       E+ +    ++   
Sbjct: 260 AEDQLPIKLTAHSPCFRSEAGSYGRDTRGMIRQHQFDKVEMVQIVHPEKSYEALEEMTGH 319

Query: 411 IISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
             ++ +  G    ++ L T              +W  A+N  + +
Sbjct: 320 AEAVLQKLGLPYRVMSLCTGDMGFGAAKTYDLEVWLPAQNTYREI 364


>gi|315142788|gb|ADT80969.1| glutamyl- and prolyl-tRNA synthetase [Myrmekiaphila torreya]
          Length = 148

 Score = 60.6 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 53/143 (37%), Gaps = 19/143 (13%)

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           GA +    E  +  + GR  Q  T   +  N    F   + +  + + H   +++  +G 
Sbjct: 9   GADFTTTVEAYVP-SNGRAIQGATSHHLGQNFSKMFEIVFEHPDTVEKH--YVYQNSWGL 65

Query: 531 IERFIGIMIENFKGNLPLWL----SPIQAIVTTITSSA----------VEYAQEIANLLK 576
             R IG+ +     N  L L    +P Q ++     +A           E  + +   L+
Sbjct: 66  SSRSIGVAVMVHGDNAGLVLPPRVAPHQVVIVPCGVTANLPESEKKLLAEKCEALEKELR 125

Query: 577 SHHLSIETDFR-NETINYKIREH 598
              + ++ D+R N +  +K    
Sbjct: 126 EASIRVKGDYRENYSPGWKFNHW 148


>gi|313896743|ref|ZP_07830291.1| serine--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430]
 gi|312974660|gb|EFR40127.1| serine--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430]
          Length = 423

 Score = 60.6 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 38/251 (15%), Positives = 81/251 (32%), Gaps = 25/251 (9%)

Query: 210 GDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWH 269
            D       R  GT      E   +    E+    D  + A+               F+ 
Sbjct: 115 RDETENPEVRRTGTPRVFDFEPKAHWDIGEQLGILDAERAAKVTGARFT--------FYK 166

Query: 270 RKGWKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
             G ++ +  I++M     +   Y E+  P ++++     +G    +  +MF ++  D  
Sbjct: 167 GLGARLERACINFMMDLHAEKHGYTEMLAPYIVNESSMVGTGQLPKFAEDMFKLEGLD-- 224

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVR 384
                 + L P             +    +LP     + + +R E   +     GL+R  
Sbjct: 225 ------YYLVPTAEVPTTNYHRDEILDAAQLPEYYTSYTACFRAEAGSAGRDTRGLIRQH 278

Query: 385 GFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDAL 440
            F + +   F T E  ++E   +      + +       +++L T              +
Sbjct: 279 QFNKVELIKFVTPETSWDELESMVEAAEDVLRTLELPYRVIQLCTGDMSFTSAKTYDLEV 338

Query: 441 WDDAENIMKGV 451
           W  A+N  + +
Sbjct: 339 WMPAQNKYREI 349


>gi|323697575|ref|ZP_08109487.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfovibrio sp. ND132]
 gi|323457507|gb|EGB13372.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfovibrio desulfuricans
           ND132]
          Length = 737

 Score = 60.6 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 1/58 (1%)

Query: 10  PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPED 66
           P+G IK  P  AT  D A SI   +  K     +NG++  L   ++ G S+EIIT ++
Sbjct: 399 PNGDIKELPDGATPVDFAYSIHSEVGDKCAGAKVNGRIVPLQYRLQNGDSVEIITDKN 456


>gi|253577336|ref|ZP_04854653.1| seryl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14]
 gi|251843236|gb|EES71267.1| seryl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14]
          Length = 428

 Score = 60.6 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 67/190 (35%), Gaps = 16/190 (8%)

Query: 261 DGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANM 318
            GS   F+   G ++ + LI++M     +   YEE+  P +++Q     +G    +  ++
Sbjct: 159 TGSRFTFYKGLGARLERALINFMMDLHSNEHGYEEMLPPYIVNQDSLYGTGQLPKFEEDL 218

Query: 319 FAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS-- 376
           F +  ++D       + L P             + +  +LP     + S +R+E   +  
Sbjct: 219 FKLTGSND-------YYLIPTAEVPVTNYHRDEILNAEDLPRYYVAYSSCFRSEAGAAGR 271

Query: 377 -LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI----MVKLSTRP 431
              GL+R   F + +       +  ++E  K+      + +  G                
Sbjct: 272 DTRGLIRQHQFNKVEMIKIVHPDTSYDELEKMTENAERVLQLLGLPYRVLALCTGDMGFT 331

Query: 432 EKRVGSDALW 441
             +     +W
Sbjct: 332 AAKTYDLEVW 341


>gi|119774911|ref|YP_927651.1| seryl-tRNA synthetase [Shewanella amazonensis SB2B]
 gi|166223284|sp|A1S6H5|SYS_SHEAM RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|119767411|gb|ABL99981.1| seryl-tRNA synthetase [Shewanella amazonensis SB2B]
          Length = 428

 Score = 60.6 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 66/188 (35%), Gaps = 12/188 (6%)

Query: 273 WKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M      +  Y E   P +++      +G    +  ++F +K A    ++
Sbjct: 170 ARMHRALAQFMLDLHTIEHGYTEAYVPLLVNTDSLLGTGQLPKFSEDLFNLKPA---TEE 226

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
            +  +L P        +    +    +LP+++    + +R+E         GL+R   F 
Sbjct: 227 GQALSLIPTAEVPVTNLVRDTILDEADLPIKITAHTACFRSEAGSYGKDTRGLIRQHQFD 286

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E   +   ++     ++ K  G     V L T              +W  
Sbjct: 287 KVEMVQIVKPENSMDALEQMVGHAENVLKKLGLPYRTVVLCTGDMGFGAAKTYDIEVWLP 346

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 347 AQNTYREI 354


>gi|319400948|gb|EFV89167.1| alanyl-tRNA synthetase [Staphylococcus epidermidis FRI909]
          Length = 876

 Score = 60.6 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 63/152 (41%), Gaps = 10/152 (6%)

Query: 55  REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQP 113
           +   +E    ++ R L    HS  H++  A++ +  +     G ++E     +DF    P
Sbjct: 545 QNAKVEARVNKEDRRLIQKNHSATHLLHAALKEVLGDHVNQAGSLVEPERLRFDFSHFGP 604

Query: 114 FSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTL 173
            + +E+  +E+++ E I R      Q +S E+A+ +        K          + V +
Sbjct: 605 MTQEEINLVERRVNEEIWRAIDVRIQEMSIEEAKSIGAMALFGEKY--------GDIVRV 656

Query: 174 YRQGEW-FDLCRGPHVRSTGQVKKFFKLMKVA 204
                +  +LC G HV +T ++  F  + +  
Sbjct: 657 VNMAPFSIELCGGIHVNNTAEIGLFKIVSESG 688


>gi|303229444|ref|ZP_07316234.1| histidine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
 gi|303230874|ref|ZP_07317621.1| histidine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
 gi|302514634|gb|EFL56629.1| histidine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
 gi|302515980|gb|EFL57932.1| histidine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
          Length = 423

 Score = 60.6 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 71/414 (17%), Positives = 144/414 (34%), Gaps = 57/414 (13%)

Query: 276 FQTLISYMRRKIKD-DYEEINTPQVLDQHLW--QQSGHWDSYRANMFAVKCADDTIKDLR 332
           +  +  +MR   K   + EI TP   D  L+        D     M+     DD     +
Sbjct: 20  WHYIEQHMREICKAYGFSEIRTPAFEDTKLFLRGIGETTDVVSKEMYTFSTGDDK---EQ 76

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
           ++ L+P N    V  +       +E   +    GS++R++   +     R R F Q  A 
Sbjct: 77  SYTLRPENTASAVRAYLENKVYGKENLTKWFYMGSMFRHDKPQA----GRYREFHQFGAE 132

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST------RPEKRVGSDALWDDAEN 446
           V  +   + +   ++  +I+ + KDFG + + V++++      RP  R      ++  ++
Sbjct: 133 VLGSPSPVVDS--EVICMIVQLLKDFGLKDLNVEVNSVGCPNCRPTYRQKLIEFFEPKKD 190

Query: 447 IMKG------------VLDTIKNSSQ--------------DRINTGVLLGEGAFYGPKFE 480
            +              +LD    + +              +  NT     +        +
Sbjct: 191 QLCEDCQERLYKNPLRLLDCKNETCKALSVGAPEIHEHLCEECNTHFEELKTLLDAANIQ 250

Query: 481 YILKDAIGR-----DWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG---SIE 532
           Y L   + R           +Q          A               H    G    +E
Sbjct: 251 YNLNPRLVRGLDYYTKTAFEVQYTPLGAQSAVAGGGRYDGLVEELDGPHTPAIGFAMGME 310

Query: 533 RFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETIN 592
           R +  + +      P  + P    V  +  +A   A +I   L+S +++ E D + +++ 
Sbjct: 311 RLLLALEKQNLLPEPT-IEP-AVFVVALGEAAKLEAFKICQTLRSAYITAEMDGQGKSMK 368

Query: 593 YKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL---DAIPILTK 643
            +++  +      +II GD E +++   IR   ++  + V L    + I  L K
Sbjct: 369 AQLKYANKIHAKYVIIVGDDELAKQEAIIRFMETSEQETVPLASVSERISSLVK 422


>gi|167855515|ref|ZP_02478278.1| seryl-tRNA synthetase [Haemophilus parasuis 29755]
 gi|167853381|gb|EDS24632.1| seryl-tRNA synthetase [Haemophilus parasuis 29755]
          Length = 434

 Score = 60.6 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 25/190 (13%), Positives = 62/190 (32%), Gaps = 11/190 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD--DTI 328
            ++ + L  +M     +   Y E   P +++      +G    +  ++F  +  +  D  
Sbjct: 171 ARLHRALSQFMLDLHTEQHGYVETYVPYLVNHDTLYGTGQLPKFGEDLFHTQPLEGQDPN 230

Query: 329 KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRG 385
              + +AL P        +    +     LP++L      +R+E         GL+R+  
Sbjct: 231 AVQKPYALIPTAEVPVTNLVRDEILDEESLPLKLTAHTPCFRSEAGSYGRDTRGLIRMHQ 290

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALW 441
           F + +       E+      ++      + +        + L +              +W
Sbjct: 291 FDKVEMVQIVAPEKSMEALEELTGHAEKVLQLLNLPYRKMLLCSGDMGFGSSKTYDLEVW 350

Query: 442 DDAENIMKGV 451
             A+N  + +
Sbjct: 351 LPAQNTYREI 360


>gi|116490520|ref|YP_810064.1| seryl-tRNA synthetase [Oenococcus oeni PSU-1]
 gi|290889920|ref|ZP_06553007.1| hypothetical protein AWRIB429_0397 [Oenococcus oeni AWRIB429]
 gi|122277293|sp|Q04GM3|SYS_OENOB RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|116091245|gb|ABJ56399.1| seryl-tRNA synthetase [Oenococcus oeni PSU-1]
 gi|290480530|gb|EFD89167.1| hypothetical protein AWRIB429_0397 [Oenococcus oeni AWRIB429]
          Length = 439

 Score = 60.6 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 68/188 (36%), Gaps = 15/188 (7%)

Query: 272 GWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G ++ + + ++M     ++ Y E+ TP ++       +G +  +  + +        +  
Sbjct: 181 GARLERAVYNFMLDEHRREGYTELLTPYMVTNESMYATGQFPKFVDDAY-------EVGK 233

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE---PSGSLHGLMRVRGFT 387
            ++  + P      V      +    ELP+ +      +R E         GL+R+  F 
Sbjct: 234 NQSMTMIPTAEVALVNWRRDEVLDESELPLYITALSPAFRQEAGAAGKDTRGLIRLHQFN 293

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +   F   E  +NE  K+     +I +       +++LST              +W  
Sbjct: 294 KVEMVKFTKPEDSYNELEKMTVDAENILQKLELPYHVIRLSTGDMGFGSAMTYDLEVWFP 353

Query: 444 AENIMKGV 451
            ++  + +
Sbjct: 354 TQDKYREI 361


>gi|297624147|ref|YP_003705581.1| alanyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
 gi|297165327|gb|ADI15038.1| alanyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
          Length = 917

 Score = 60.6 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 47/125 (37%), Gaps = 1/125 (0%)

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIAR 132
            H+  H++  A++S+        G  +  +   +DF   QP S  EL ++E  +   I  
Sbjct: 597 HHTATHLLHAALRSVLGTHVAQAGSLVAPERLRFDFSHPQPLSESELRRLEALVNRWIQA 656

Query: 133 DSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTG 192
           D     + +  E+AR          K      + +       +     +LC G HV  TG
Sbjct: 657 DFTVSWRVVPLEEARAAGAMMLFGEKYGANVRMVSVTPERDPKSSVSTELCGGTHVARTG 716

Query: 193 QVKKF 197
            +  F
Sbjct: 717 TLGVF 721


>gi|293400450|ref|ZP_06644595.1| alanine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291305476|gb|EFE46720.1| alanine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 893

 Score = 60.6 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 54/137 (39%), Gaps = 10/137 (7%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGF-YYDFDKEQPFS 115
             +++      R +    HSC H++  A++ +        G  + D +  +DF   +  S
Sbjct: 565 SKLQLAVDNKKRDIITSNHSCTHLLQSALKKVVGNHIQQAGSFVSDEYLRFDFTHFEKVS 624

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
             +L +IE+ +   I+   P  K  +  E+A++             L      + V +  
Sbjct: 625 VQQLKEIEQLVNRFISEHHPVSKVEMPIEEAKQ--------SGATALFDEKYGDVVRVVT 676

Query: 176 QGE-WFDLCRGPHVRST 191
            G+   + C G HV +T
Sbjct: 677 MGDVSKEFCGGCHVNNT 693


>gi|242242892|ref|ZP_04797337.1| alanyl-tRNA synthetase [Staphylococcus epidermidis W23144]
 gi|242233667|gb|EES35979.1| alanyl-tRNA synthetase [Staphylococcus epidermidis W23144]
          Length = 876

 Score = 60.6 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 63/152 (41%), Gaps = 10/152 (6%)

Query: 55  REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQP 113
           +   +E    ++ R L    HS  H++  A++ +  +     G ++E     +DF    P
Sbjct: 545 QNAKVEARVNKEDRRLIQKNHSATHLLHAALKEVLGDHVNQAGSLVEPERLRFDFSHFGP 604

Query: 114 FSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTL 173
            + +E+  +E+++ E I R      Q +S E+A+ +        K          + V +
Sbjct: 605 MTQEEINLVERRVNEEIWRAIDVRIQEMSIEEAKSIGAMALFGEKY--------GDIVRV 656

Query: 174 YRQGEW-FDLCRGPHVRSTGQVKKFFKLMKVA 204
                +  +LC G HV +T ++  F  + +  
Sbjct: 657 VNMAPFSIELCGGIHVNNTAEIGLFKIVSESG 688


>gi|227112001|ref|ZP_03825657.1| seryl-tRNA synthetase [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
 gi|227328169|ref|ZP_03832193.1| seryl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 431

 Score = 60.6 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 24/188 (12%), Positives = 62/188 (32%), Gaps = 10/188 (5%)

Query: 273 WKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M      +  Y+E   P +++      +G    +  ++F      +   +
Sbjct: 171 ARLHRALAQFMLDLHTQQHGYQEAYVPYLVNHATLYGTGQLPKFGEDLFHTTPLSEEA-E 229

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
             ++AL P        +    +     LP+++      +R+E         GL+R+  F 
Sbjct: 230 SSSYALIPTAEVPLTNLVRDEILDEESLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFD 289

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E       ++     ++ +        V L T              +W  
Sbjct: 290 KVELVQIVRPEDSMQALEELTTHAETVLQLLKLPYRKVLLCTGDMGFGSTKTYDLEVWLP 349

Query: 444 AENIMKGV 451
           A++  + +
Sbjct: 350 AQDTYREI 357


>gi|212693638|ref|ZP_03301766.1| hypothetical protein BACDOR_03157 [Bacteroides dorei DSM 17855]
 gi|237724236|ref|ZP_04554717.1| alanyl-tRNA synthetase [Bacteroides sp. D4]
 gi|265755936|ref|ZP_06090403.1| alanyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
 gi|212663891|gb|EEB24465.1| hypothetical protein BACDOR_03157 [Bacteroides dorei DSM 17855]
 gi|229437424|gb|EEO47501.1| alanyl-tRNA synthetase [Bacteroides dorei 5_1_36/D4]
 gi|263234014|gb|EEZ19615.1| alanyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
          Length = 872

 Score = 60.6 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 30/144 (20%), Positives = 59/144 (40%), Gaps = 10/144 (6%)

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDELAQ 121
              + R+     HSC H++ EA++ +        G  +  +   +DF   Q  + ++L +
Sbjct: 551 VDTEKRAACAANHSCTHLLDEALRQVLGTHVEQKGSLVTPESLRFDFSHFQKVTDEQLRE 610

Query: 122 IEKKMQEIIARDSPF-LKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +E  +   I  + P    + L  EKA+EL        K          + V + + G   
Sbjct: 611 VEHLVNAKIRENIPLTEYRNLPIEKAKELGAIALFGEKY--------GDEVRVVQFGNSI 662

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVA 204
           + C G HV +TG++     + + +
Sbjct: 663 EFCGGTHVSATGKIGMVRIISESS 686


>gi|196250079|ref|ZP_03148773.1| alanyl-tRNA synthetase [Geobacillus sp. G11MC16]
 gi|196210263|gb|EDY05028.1| alanyl-tRNA synthetase [Geobacillus sp. G11MC16]
          Length = 878

 Score = 60.6 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 32/144 (22%), Positives = 57/144 (39%), Gaps = 10/144 (6%)

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDELAQ 121
             E  RS  V  H+  H++ +A++ +        G  +  D   +DF        DEL +
Sbjct: 554 VDEVKRSQIVKNHTATHLLHQALKDVLGRHVNQAGSLVAPDRLRFDFTHFGQVKPDELER 613

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-F 180
           IE  + E I +  P    Y   E+A+ +        K          + V + + G++  
Sbjct: 614 IEAIVNEQIWKSIPVDIFYKPLEEAKAMGAMALFGEKY--------GDIVRVVKVGDYSL 665

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVA 204
           +LC G HV +T  +  F  + +  
Sbjct: 666 ELCGGCHVPNTAAIGLFKIVSESG 689


>gi|330446442|ref|ZP_08310094.1| seryl-tRNA synthetase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328490633|dbj|GAA04591.1| seryl-tRNA synthetase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 435

 Score = 60.6 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 26/190 (13%), Positives = 63/190 (33%), Gaps = 11/190 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + +  +M     +   Y E+  P +++      +G    +  ++F  +   + + D
Sbjct: 172 ARLHRAIAQFMLDLHTEEHGYTEMYVPYLVNADSLFGTGQLPKFGEDLFHTQPLTEKVND 231

Query: 331 L--RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRG 385
              RT +L P        +    +    +LPV++      +R+E         GL+R+  
Sbjct: 232 EEPRTLSLIPTAEVPVTNMMRDTITDEADLPVKMTAHTPCFRSEAGSYGRDTRGLIRMHQ 291

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALW 441
           F + +       E       ++      + +        V L T              +W
Sbjct: 292 FDKVELVQITKPEDSMAALEELTGHAEKVLQLLELPYRKVVLCTGDMGFGSCKTYDLEVW 351

Query: 442 DDAENIMKGV 451
             A+   + +
Sbjct: 352 VPAQETYREI 361


>gi|304407565|ref|ZP_07389217.1| alanyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
 gi|304343516|gb|EFM09358.1| alanyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
          Length = 877

 Score = 60.6 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 31/141 (21%), Positives = 62/141 (43%), Gaps = 10/141 (7%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFSSDELAQIEK 124
           D R   V  H+  H++ +A++ +  E     G ++  D   +DF      + +ELA IE+
Sbjct: 553 DLREDIVKNHTATHLLHKALKEVLGEHVNQAGSLVKSDSLRFDFSHFGAITEEELADIER 612

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLC 183
           ++ E I   +P + +  +  +A+ +        K          + V + + G +  +LC
Sbjct: 613 RVNEQIWIGTPVVIESKAIAEAKAMGAMALFGEKY--------GDVVRVVQVGGYSIELC 664

Query: 184 RGPHVRSTGQVKKFFKLMKVA 204
            G HV +T Q+  F  + +  
Sbjct: 665 GGCHVANTSQIGTFKLIGESG 685


>gi|255034936|ref|YP_003085557.1| histidyl-tRNA synthetase [Dyadobacter fermentans DSM 18053]
 gi|254947692|gb|ACT92392.1| histidyl-tRNA synthetase [Dyadobacter fermentans DSM 18053]
          Length = 453

 Score = 60.6 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 49/342 (14%), Positives = 102/342 (29%), Gaps = 62/342 (18%)

Query: 358 LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           +P +  +   V+R +         R R F Q DA V  T   +     +I  L+  I   
Sbjct: 118 MPFKRYQIQPVWRADRPQK----GRYREFYQCDADVVGTDSLLCEA--EIVGLLHDILPA 171

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDD-AENIMKGVLDTIKNSSQDR-------------- 462
            G     VK++ R      +D +     E  +   +D +    +D+              
Sbjct: 172 LGINDFTVKINNRKILTGIADIIGAHGMEGPLCVAIDKLDKIGKDKVVEELLERGFASDS 231

Query: 463 -------------------INTGVLLGEGAFYG------------------PKFEYILKD 485
                              + + +   E A  G                   K E+ +  
Sbjct: 232 IDKLEPIFSLSADEDPFTELKSWLSESEVALKGIQELEEVWAMVKILGLENAKIEFDVTL 291

Query: 486 AIGRDWQCGTIQV--DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF--IGIMIEN 541
           A G  +  G I      ++     +      +      +   +  G       I  ++E 
Sbjct: 292 ARGLSYYTGAIFEVKAHHVQIGSISGGGRYDNLTGTFGVPGISGVGISLGVDRIYDVMEE 351

Query: 542 FKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
                    +  + +++     A  Y   I    +   ++ E    +  +  ++     K
Sbjct: 352 LNLFPDSQTTSTKVMISNFDEEAFTYGLSILPKFRKAGINSEIYPDSVKLKKQLDYADRK 411

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           +IP +I+ G  E     + ++   +   QK+   D I +L +
Sbjct: 412 RIPFVILIGSDEIQSGLLTLKNMKTGEQQKLKAEDIITLLNR 453


>gi|238928176|ref|ZP_04659936.1| serine--tRNA ligase [Selenomonas flueggei ATCC 43531]
 gi|238884136|gb|EEQ47774.1| serine--tRNA ligase [Selenomonas flueggei ATCC 43531]
          Length = 423

 Score = 60.6 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 36/251 (14%), Positives = 79/251 (31%), Gaps = 25/251 (9%)

Query: 210 GDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWH 269
            D       R  GT          +    +     D  + A+               F+ 
Sbjct: 115 RDETENPEVRRCGTPRTFDFTPKAHWDIGDALGILDAERAAKVTGARFT--------FYK 166

Query: 270 RKGWKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
             G ++ +  I++M     +   Y E+  P ++++     +G    +  +MF ++  D  
Sbjct: 167 GLGARLERACINFMMDLHAEKHGYTEMLAPYIVNEASMIGTGQLPKFAEDMFKLEGLD-- 224

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVR 384
                 + L P             +    +LP     + + +R E   +     GL+R  
Sbjct: 225 ------YYLVPTAEVPTTNYHRDEILDAEQLPEYYTSYTACFRAEAGSAGRDTRGLIRQH 278

Query: 385 GFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDAL 440
            F + +   F T E  ++E   +      + K       +++L T              +
Sbjct: 279 QFNKVELIKFVTPETSWDELESMVAAAEDVLKILELPYRVIQLCTGDMSFTSAKTYDIEV 338

Query: 441 WDDAENIMKGV 451
           W  A++  + +
Sbjct: 339 WMPAQDKYREI 349


>gi|238650757|ref|YP_002916611.1| histidyl-tRNA synthetase [Rickettsia peacockii str. Rustic]
 gi|259511957|sp|C4K1W2|SYH_RICPU RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|238624855|gb|ACR47561.1| histidyl-tRNA synthetase [Rickettsia peacockii str. Rustic]
          Length = 414

 Score = 60.6 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 69/426 (16%), Positives = 144/426 (33%), Gaps = 77/426 (18%)

Query: 269 HRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
               +K+   +I+  R   +   Y++++TP V    ++ +S       +++ + +     
Sbjct: 15  LPDDYKVHDYIINTARDVGVLYGYKQMSTPIVEYTKVFNRS---MGESSDIISKEIYSFL 71

Query: 328 IKDLRTFALKP--MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRG 385
            K     AL+P    C     + N   +   +LP++    G V+R +   +     R R 
Sbjct: 72  DKSNDFVALRPEFTACIIRSLISN---RLQHKLPLKFFSTGPVFRYDRPQA----GRQRQ 124

Query: 386 FTQDD-AHVFCTKEQMFNECLKIHNLIISIYKD----------FGFEKIMVKLSTRPEKR 434
           F Q +  ++         + LK+   I+   +            G  +       +  + 
Sbjct: 125 FHQLNYEYIGAKGAITDADTLKLAVDILKALEIEQDTTLELNSLGCNESRSVYQQKLVEY 184

Query: 435 VGSDALWDDAENIMK------GVLDTIKNSSQD-----RINTGVLLGEGAFY-------- 475
           +         E+ ++       +LD+   + Q       + +     E   Y        
Sbjct: 185 LNDFKDQLSKESKIRLSKNPMRILDSKSETDQKIIANAPVLSEYYTDESKEYFEELIQYL 244

Query: 476 ---GPKFEYILKDAIGRDWQCGTI----------QVDFNLPSRFNAFYVNSHSEKCHPVM 522
              G K+        G D+ C T           Q       R++       +    P +
Sbjct: 245 DILGVKYSINPCLVRGLDYYCHTAFEFTTKKLGSQSTILAGGRYDGLAKIMGNNDDVPAI 304

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSI 582
                   IER I ++ E     +          V  I  + + YA EI + L++ +++I
Sbjct: 305 ---GFAAGIER-IALIREYNISEVKP------VFVLPIGKNNICYALEIVDKLRTENIAI 354

Query: 583 ETDFRNETINYKIREHSIKKI-----PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
                 E++  KI +  +++I       II  GD+E +  ++ I+         V    A
Sbjct: 355 II----ESLG-KIAK-RMQRIFNENAQFIIFIGDEEQANNNLKIKDLKKEEEYIVDFAKA 408

Query: 638 IPILTK 643
           + +L K
Sbjct: 409 LELLKK 414


>gi|126310917|ref|XP_001372417.1| PREDICTED: hypothetical protein [Monodelphis domestica]
          Length = 513

 Score = 60.6 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 26/165 (15%), Positives = 56/165 (33%), Gaps = 11/165 (6%)

Query: 271 KGWKIFQT---LISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
           KG  +F     +   +R      Y  I TP  + + + Q+      +   ++ V      
Sbjct: 197 KGVLVFLEQALIQLALRTLSSRGYTPIYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGSE 256

Query: 328 IKDLRTFALKP---MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLM 381
             D  ++  K     +     A+         +LP++ A F + +R E         G+ 
Sbjct: 257 KSDDSSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGFSTCFRQEVGSHGRDTRGIF 316

Query: 382 RVRGFTQDDAHVFCTKEQ--MFNECLKIHNLIISIYKDFGFEKIM 424
           RV  F + +  V+ +      +    ++ +     Y+  G    +
Sbjct: 317 RVHQFEKIEQFVYASPHDNKSWEMFEEMISTAEEFYQALGIPYHI 361


>gi|17545935|ref|NP_519337.1| histidyl-tRNA synthetase [Ralstonia solanacearum GMI1000]
 gi|32130128|sp|Q8Y029|SYH_RALSO RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|17428230|emb|CAD14918.1| probable histidyl-trna synthetase (histidine--trna ligase)(hisrs)
           protein [Ralstonia solanacearum GMI1000]
          Length = 432

 Score = 60.6 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 59/434 (13%), Positives = 120/434 (27%), Gaps = 81/434 (18%)

Query: 269 HRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ--QSGHWDSYRANMFAVKCAD 325
                 +++   + +R  ++   Y++I TP V    L+        D     M++   A 
Sbjct: 14  LPGDAPLWEHFDNAVRSMLRAYGYQQIRTPIVEQTQLFVRGIGEVTDIVEKEMYSFTDAL 73

Query: 326 DTIKDLRTFALKPMNCPGHVAVFNH--GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRV 383
           +         ++P    G  A            + P RL   G ++R+E         R 
Sbjct: 74  N----GEQLTMRP---EGTAAAVRAVIEHNLLYDGPKRLWYTGPMFRHEKPQR----GRY 122

Query: 384 RGFTQD--DAHVFCTKEQMFNECLKIHNLIISIYKDFG------FEKIMVKLSTRPEKRV 435
           R F Q   +A  F   +       ++  +   ++ D G          + +   R   R 
Sbjct: 123 RQFHQVGVEALGFAGPDIDA----EVILMCQRLWDDLGLVGLKLELNSLGQAEERAAHRA 178

Query: 436 GSDALWDDAENIMKG-------------------VLDTIKNSSQDRINTGVLLGEGAFYG 476
                 +  ++I+                      L  +   +   I+         F G
Sbjct: 179 DLIKYLEGFQDILDEDSKRRLYTNPLRVLDTKNPALQEMAAGAPKLIDYLGEESCAHFEG 238

Query: 477 P-------KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIH----- 524
                      + +   + R      + V      +  A    +   +  P++       
Sbjct: 239 VQKLLKANNIPFTINPRLVRGLDYYNLTVFEWTTDKLGAQGTVAGGGRYDPLIEQIGGKP 298

Query: 525 --RAVFGS-IERFIGIMIENFKGNLPLWLSPIQ----AIVTTITSSAVEYAQEIANLLKS 577
                +   +ER I ++ E         L+P        +      A   A   A  L+ 
Sbjct: 299 APACGWAMGVERIIELLREEN-------LAPEPQGSDVYIVHQGDEAQVQALVAAERLRD 351

Query: 578 HHLSIET----DFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS----TTT 629
             L +      + RN +   + +          +I GD E +   + I+           
Sbjct: 352 AGLDVILHASAEGRNGSFKSQFKRADASGAAYAVIIGDDEVASGVVQIKPLRGDPNADAQ 411

Query: 630 QKVSLLDAIPILTK 643
           Q V     +  L  
Sbjct: 412 QTVPSDQLVDRLID 425


>gi|325298974|ref|YP_004258891.1| Histidyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
 gi|324318527|gb|ADY36418.1| Histidyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
          Length = 454

 Score = 60.6 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 14/92 (15%), Positives = 33/92 (35%)

Query: 551 SPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           +  Q +     S+   Y   I   ++   +  E       +  ++   + K IP + I G
Sbjct: 362 ASTQVLFVNFGSAETAYVLPILAKVREAGIRAEIFPDASKMKKQMSYANAKAIPFVAIAG 421

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           + E  E  + ++   +     V+  + I  + 
Sbjct: 422 ENEMQEGKLTLKNMTTGEQHLVTPDELIATVK 453


>gi|312882486|ref|ZP_07742227.1| seryl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309369886|gb|EFP97397.1| seryl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 435

 Score = 60.6 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 26/193 (13%), Positives = 64/193 (33%), Gaps = 17/193 (8%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + +  +M     +   Y E+  P +++      +G    +  ++F  +   + + D
Sbjct: 172 ARLHRAIAQFMLDLHTEEHGYTEMYVPYLVNSDSLFGTGQLPKFGEDLFHTEPLTEKVND 231

Query: 331 L--RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRG 385
              R  +L P        +    +    ELP+++      +R+E         GL+R+  
Sbjct: 232 EDPRKLSLIPTAEVPLTNMVRDTITDEDELPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQ 291

Query: 386 FTQDDAHVFCTKEQMFN-------ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSD 438
           F + +       E   +          K+  L+   Y+        +    R        
Sbjct: 292 FDKVELVQITKPEDSMDALEQLTAHAEKVLQLLELPYRKVILCTGDMGFGARKTY---DL 348

Query: 439 ALWDDAENIMKGV 451
            +W  A+   + +
Sbjct: 349 EVWVPAQETYREI 361


>gi|301055897|ref|YP_003794108.1| alanyl-tRNA synthetase [Bacillus anthracis CI]
 gi|300378066|gb|ADK06970.1| alanyl-tRNA synthetase [Bacillus cereus biovar anthracis str. CI]
          Length = 880

 Score = 60.6 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 30/145 (20%), Positives = 61/145 (42%), Gaps = 10/145 (6%)

Query: 55  REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQP 113
           ++ +++ I     RS  V  H+  H++ +A++ +        G  +  +   +DF     
Sbjct: 547 KDAAVKAIIDTKNRSSVVKNHTATHLLHQALKDVLGTHVNQAGSLVTSERLRFDFSHFGQ 606

Query: 114 FSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTL 173
             +DEL +IE+ + E I           + E+A+E+        K          + V +
Sbjct: 607 VQADELEKIERIVNEKIWESIDVEISQKAIEEAKEMGAMALFGEKY--------GDVVRV 658

Query: 174 YRQGEW-FDLCRGPHVRSTGQVKKF 197
            + G++  +LC G HV +T  +  F
Sbjct: 659 VQVGDYSLELCGGCHVDNTASIGIF 683


>gi|167587051|ref|ZP_02379439.1| histidyl-tRNA synthetase [Burkholderia ubonensis Bu]
          Length = 446

 Score = 60.6 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 64/414 (15%), Positives = 121/414 (29%), Gaps = 79/414 (19%)

Query: 289 DDYEEINTPQVLDQHLWQ--QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA 346
             Y+ I TP V    L+        D     M++   A +         ++P N    V 
Sbjct: 42  YGYQNIRTPIVEHTQLFTRGIGEVTDIVEKEMYSFTDALN----GEHLTMRPEN-TAAVV 96

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD--DAHVFCTKEQMFNEC 404
                     + P RL   G ++R+E         R R F Q   +A  F   +      
Sbjct: 97  RAAIEHNMLYDGPKRLWYIGPMFRHERPQR----GRYRQFHQVGVEALGFAGPDADA--- 149

Query: 405 LKIHNLIISIYKDFG--------------FEKIMVKLSTRPEKRVGSDALWDDAENIM-- 448
            +I  +   ++ D G               E+   ++          DAL  DA+  +  
Sbjct: 150 -EIIMMCQRLWDDLGLTGIKLEINSLGLAEERAAHRVELIKYLEQHVDALDADAQRRLYT 208

Query: 449 ---------KGVLDTIKNSSQDRINTGVLLGEGAFYGP-------KFEYILKDAIGRDWQ 492
                       L  I  ++   I+         F G           + +   + R   
Sbjct: 209 NPLRVLDTKNPALQEIVQNAPKLIDFLGDHSRAHFDGLQRLLKANNIPFTINPRLVRGLD 268

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIH-------RAVFGS-IERFIGIMIENFKG 544
              + V   +  +  A    +   +  P++            +   +ER + ++ E    
Sbjct: 269 YYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQLGGKPTAACGWAMGVERILELLKEEQ-- 326

Query: 545 NLPLWLSPIQ----AIVTTITSSAVEYAQEIANLLKSHHLSI----ETDFRNETINYKIR 596
                L P Q      V     +A E A   A  L+   L +      D    +   +++
Sbjct: 327 -----LMPEQDGVDVYVVHQGEAAREQAFIAAERLRDTGLDVIFHCSADGAPASFKSQMK 381

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRR-FGSTT------TQKVSLLDAIPILTK 643
                     +I G++E +  ++G++   G+         Q V +      L  
Sbjct: 382 RADASGAAFAVIFGEEEIANGTVGVKALRGTGEEGEKNAQQTVPVESLTEFLIN 435


>gi|325954605|ref|YP_004238265.1| seryl-tRNA synthetase [Weeksella virosa DSM 16922]
 gi|323437223|gb|ADX67687.1| seryl-tRNA synthetase [Weeksella virosa DSM 16922]
          Length = 422

 Score = 60.6 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 36/242 (14%), Positives = 78/242 (32%), Gaps = 20/242 (8%)

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIA----EDGSGVIFWHRKGWKIFQ 277
           G   N  + +        +     H ++A++ DL          G+G   +  KG ++ +
Sbjct: 118 GKDENDNEIVFSSGDASPKKGYLPHWEVAKKYDLIDFELGVKITGAGFPVYKGKGARLQR 177

Query: 278 TLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFAL 336
            LI Y + +    DY+EI  P V+++           Y       K             L
Sbjct: 178 ALIQYFLDKNTAADYQEIIPPFVVNE--------ASGYGTGQLPDKEGQMYYVKEDDLYL 229

Query: 337 KPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHV 393
            P +      ++   +    ELP++   +   +R E       + GL R+  F + +   
Sbjct: 230 IPTSEVPVTNIYRDVILRDEELPLKHTAYSPCFRREAGSYGKDVRGLNRLHQFEKVEIVR 289

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENIMK 449
               E       ++   +  + ++      +++L                ++  A+    
Sbjct: 290 IEKPENSMAALDEMVEHVKGLLEELDLPYRILRLCAGDTGFASSITYDFEVFSQAQEKWL 349

Query: 450 GV 451
            V
Sbjct: 350 EV 351


>gi|303228838|ref|ZP_07315651.1| serine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
 gi|302516458|gb|EFL58387.1| serine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
          Length = 426

 Score = 60.6 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 86/246 (34%), Gaps = 21/246 (8%)

Query: 219 RIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIF--WHRKGWK 274
            +        ++         + E + H  +  E+D+  F+ A   SG  F  +   G +
Sbjct: 112 PVGADEDENVEQRKWGEPRQFDFEPKAHWDIGEELDILDFNRAVKMSGARFTVYKGLGAR 171

Query: 275 IFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           + + LI++M     D   Y E+ TP ++ +     +G    +  +M+ V        +  
Sbjct: 172 LERALINFMVDLHVDKQGYTEMMTPYMVTRETLTGTGQLPKFAEDMYHV--------ENT 223

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQD 389
            + L P          +  + S  ELP     F + +R E   +     GL+R   F + 
Sbjct: 224 EYFLIPTAEVTLTNYHSGEILSEDELPKYYTAFTACFRAEAGSAGRDTRGLIRQHQFNKV 283

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYK----DFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
           +       E  +NE  K+ +    + +     F    +          +     +W  A+
Sbjct: 284 EMVKLSKPEDSWNELEKLTDNAEEVLRLLELPFRVITLCTGDIGFGSAKTYDVEVWMPAQ 343

Query: 446 NIMKGV 451
           N  + +
Sbjct: 344 NKYREI 349


>gi|165932992|ref|YP_001649781.1| histidyl-tRNA synthetase [Rickettsia rickettsii str. Iowa]
 gi|189082306|sp|B0BWZ9|SYH_RICRO RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|165908079|gb|ABY72375.1| histidyl-tRNA synthetase [Rickettsia rickettsii str. Iowa]
          Length = 414

 Score = 60.6 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 70/426 (16%), Positives = 145/426 (34%), Gaps = 77/426 (18%)

Query: 269 HRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
               +K+   +I+  R   +   Y++++TP V    ++ +S       +++ + +     
Sbjct: 15  LPDDYKVHDYIINKARDVGVLYGYKQMSTPIVEYTKVFNRS---MGESSDVISKEIYSFL 71

Query: 328 IKDLRTFALKP--MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRG 385
            K     AL+P    C     + N   +   +LP++    G V+R +   +     R R 
Sbjct: 72  DKSNDCVALRPEFTACIIRSIISN---RLQHKLPLKFFSTGPVFRYDRPQA----GRQRQ 124

Query: 386 FTQDD-AHVFCTKEQMFNECLKIHNLIISIYKD----------FGFEKIMVKLSTRPEKR 434
           F Q +  ++         + LK+   I+   +            G  +       +  + 
Sbjct: 125 FHQLNYEYIGAKGAITDADTLKLAVDILKALEIEQDTTLELNSLGCNESRRVYQQKLVEY 184

Query: 435 VGSDALWDDAENIMK------GVLDTIKNSSQD-----RINTGVLLGEGAFY-------- 475
           +         E+ ++       +LD+   + Q       + +     E   Y        
Sbjct: 185 LNDFKEQLSEESKIRLSKNPMRILDSKSETDQKIIANAPVLSEYYTDESKEYFEELIQYL 244

Query: 476 ---GPKFEYILKDAIGRDWQCGTI----------QVDFNLPSRFNAFYVNSHSEKCHPVM 522
              G K+    +   G D+ C T           Q       R++       +    P +
Sbjct: 245 DILGVKYSINPRLVRGLDYYCHTAFEFTTKKLGSQSTILAGGRYDGLAKIMGNNDDVPAI 304

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSI 582
                   IER I +M E     +          V  I  + + YA EI + L++ +++I
Sbjct: 305 ---GFAAGIER-IALMREYDVSEVKP------VFVLPIGKNNICYALEIVDKLRTENIAI 354

Query: 583 ETDFRNETINYKIREHSIKKI-----PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
                 E++  KI +  +++I       II  GD+E +  ++ I+         V    A
Sbjct: 355 II----ESLG-KIAK-RMQRIFNENAQFIIFIGDEEQANNNLKIKDLKKEEEYIVDFAKA 408

Query: 638 IPILTK 643
           + +L K
Sbjct: 409 LELLKK 414


>gi|121635253|ref|YP_975498.1| alanyl-tRNA synthetase [Neisseria meningitidis FAM18]
 gi|205830172|sp|A1KV20|SYA_NEIMF RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|120866959|emb|CAM10719.1| alanyl-tRNA synthetase [Neisseria meningitidis FAM18]
 gi|325138605|gb|EGC61164.1| alanyl-tRNA synthetase [Neisseria meningitidis ES14902]
 gi|325142798|gb|EGC65170.1| alanyl-tRNA synthetase [Neisseria meningitidis 961-5945]
 gi|325198706|gb|ADY94162.1| alanyl-tRNA synthetase [Neisseria meningitidis G2136]
          Length = 874

 Score = 60.6 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 61/143 (42%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFS 115
            S+     ++ R+  +  HS  H+M +A++ +        G  +  +   +D    Q  +
Sbjct: 544 DSVTAKVDDEIRNANMRNHSATHLMHKALRDVLGRHVEQKGSLVTAESTRFDISHPQAVT 603

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           ++E+A++E+++ E +  +       +S E A++         K          + V + +
Sbjct: 604 AEEIAEVERRVNEAVLANVAVNAAIMSMEDAQKTGAMMLFGEKY--------GDEVRVLQ 655

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G +  +LC G HV  TG +  F
Sbjct: 656 MGGFSTELCGGTHVSRTGDIGLF 678


>gi|114570456|ref|YP_757136.1| seryl-tRNA synthetase [Maricaulis maris MCS10]
 gi|122315709|sp|Q0AND9|SYS_MARMM RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|114340918|gb|ABI66198.1| seryl-tRNA synthetase [Maricaulis maris MCS10]
          Length = 425

 Score = 60.6 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 36/246 (14%), Positives = 85/246 (34%), Gaps = 23/246 (9%)

Query: 220 IYGTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHI--AEDGSGVIFWHRKG--WK 274
             G       E  ++      +   RDH  L   +       A + SG  F   +G   +
Sbjct: 114 PQGADEADNVEERRWGEPRTMAFTPRDHVDLGESLGQMDFKKAAEISGSRFVALRGGLAR 173

Query: 275 IFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           + + L  +M      +  YEE++ P ++       +G    +  ++F             
Sbjct: 174 LERALAQFMLDLHTTEHGYEEVSPPYMVRDEAVFGTGQLPKFAEDLFRTTD--------- 224

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQD 389
              L P        +    + +  +LP+R+  +   +R+E   +     G++R+  F + 
Sbjct: 225 DHWLIPTAEVPLTNLARETIHAEADLPMRMTAYTPCFRSEAGSAGRDTRGMIRLHQFQKV 284

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE----KRVGSDALWDDAE 445
           +     T ++   E  ++      + +       ++KL T       +R     +W  ++
Sbjct: 285 EMVSIVTPDESDAELERMTGCAEKVLQLLELPYRVMKLCTGDMGFAARRTYDLEVWMPSQ 344

Query: 446 NIMKGV 451
           +  + +
Sbjct: 345 DCYREI 350


>gi|62896913|dbj|BAD96397.1| seryl-tRNA synthetase variant [Homo sapiens]
          Length = 514

 Score = 60.6 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 58/165 (35%), Gaps = 11/165 (6%)

Query: 271 KGWKIF--QTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
           KG  +F  Q LI Y +R      Y  I TP  + + + Q+      +   ++ V      
Sbjct: 197 KGVLVFLEQALIQYALRTLGSRGYIPIYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGSE 256

Query: 328 IKDLRTFALKP---MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLM 381
             D  ++  K     +     A+         +LP++ A   + +R E         G+ 
Sbjct: 257 KSDDNSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGRDTRGIF 316

Query: 382 RVRGFTQDDAHVFCTKEQ--MFNECLKIHNLIISIYKDFGFEKIM 424
           RV  F + +  V+ +      +    ++      +Y+  G    +
Sbjct: 317 RVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEELYQSLGIPYHI 361


>gi|333029831|ref|ZP_08457892.1| alanyl-tRNA synthetase [Bacteroides coprosuis DSM 18011]
 gi|332740428|gb|EGJ70910.1| alanyl-tRNA synthetase [Bacteroides coprosuis DSM 18011]
          Length = 872

 Score = 60.6 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 29/144 (20%), Positives = 59/144 (40%), Gaps = 10/144 (6%)

Query: 56  EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPF 114
           E +       + R+     HS  H++ +A++ +        G  +  +   +DF   Q  
Sbjct: 543 EATFMACVDREKRAACAANHSATHLLDQALREVLGSHVEQKGSLVTPETLRFDFSHFQKV 602

Query: 115 SSDELAQIEKKMQEIIARDSPF-LKQYLSHEKARELFESKKEAYKVEILESIPAKENVTL 173
           + +E+ Q+E+ + E I ++      + +  ++AR+L        K          E V +
Sbjct: 603 TDEEIRQVEQIINERIRQNISLTEYRSIPIQEARDLGAIALFGEKY--------GEEVRV 654

Query: 174 YRQGEWFDLCRGPHVRSTGQVKKF 197
            +  E  + C G HV +TG +  F
Sbjct: 655 VQFDESIEFCGGTHVPATGSIGMF 678


>gi|302872935|ref|YP_003841568.1| seryl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|307686551|ref|ZP_07628997.1| seryl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|302575792|gb|ADL49804.1| seryl-tRNA synthetase [Clostridium cellulovorans 743B]
          Length = 426

 Score = 60.6 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 41/236 (17%), Positives = 84/236 (35%), Gaps = 22/236 (9%)

Query: 220 IYGTAWNTQQELTQYLY-FLEESEKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWK 274
             G       E+ ++      E+E + H  L  ++ +          GS   F+   G +
Sbjct: 115 PDGATDEDNLEIKRWGEPRKFENEPKAHWDLGVDLKILDFERAGKVTGSRFTFYRGLGAR 174

Query: 275 IFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           + + LISY        + Y EI  P + +++  + +G    +  + F ++          
Sbjct: 175 LERALISYFLDTHVDINGYTEIMPPLMANRNSMKGTGQLPKFEEDAFTIQNNG------- 227

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQD 389
            + L P         +   +    ELP++   + + +R+E   +     GL+R   F + 
Sbjct: 228 -YFLIPTAEVPVTNYYRDEILVGEELPIKHVAYSACFRSEAGSAGRDTRGLVRQHQFNKV 286

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALW 441
           +   F  +EQ + E  K+     SI +  G     V++                +W
Sbjct: 287 ELVKFTKQEQSYEELDKLVKDAESILEGLGLPYRKVRICKGDLGFTAALKYDLEVW 342


>gi|168700524|ref|ZP_02732801.1| alanyl-tRNA synthetase [Gemmata obscuriglobus UQM 2246]
          Length = 425

 Score = 60.6 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 56/134 (41%), Gaps = 12/134 (8%)

Query: 72  VIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDELAQIEKKMQEII 130
           +  H+  H++  A++ +        G  + E+   +DF  ++P +++EL +IE+++   +
Sbjct: 96  MRNHTATHLLNLALREVLGHHVEQKGSLVDEEKTRFDFSHDKPVTAEELREIERRVNRQV 155

Query: 131 ARDSPFLKQYLSHEKAREL-------FESKKEAYKVEILESIPAKENVTLYRQGEWFDLC 183
             D     Q +   +A+ L        E   +  +V ++      E      Q    + C
Sbjct: 156 VLDQVVTAQTMPLAQAKGLPGVRAVFGEKYPDPVRVVMI----GAEAPEKVTQDMSVEFC 211

Query: 184 RGPHVRSTGQVKKF 197
            G H+  TG +  F
Sbjct: 212 GGTHLPRTGTIGYF 225


>gi|160872281|ref|ZP_02062413.1| glycyl-tRNA synthetase [Rickettsiella grylli]
 gi|159121080|gb|EDP46418.1| glycyl-tRNA synthetase [Rickettsiella grylli]
          Length = 459

 Score = 60.6 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 54/352 (15%), Positives = 107/352 (30%), Gaps = 47/352 (13%)

Query: 319 FAVKCADDTIKDLRTFAL-KPMNCPGHVAVFNHGLKSYR-ELPVRLAEFGSVYRNEPSGS 376
              K     ++D   FA  +P    G    F + + S     P  +A+ G  +RNE +  
Sbjct: 124 MMFKTTIGPLEDSNAFAYLRPETAQGIFTNFKNIMDSMSPRFPFGIAQIGKAFRNEITPR 183

Query: 377 LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG 436
            + + RVR F Q +   F    +            ++ +K+ G     +KL  +    + 
Sbjct: 184 -NFIFRVREFEQLEIEFFVKPGEDEKWHHYWVESRLTWWKNQGLNPQRLKLLNQNASEL- 241

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
             A +  A   +             +   G    EG      ++       G++      
Sbjct: 242 --AHYAKATTDI-----------LYKFPHGFEELEGISNRTDYDLG-SHTQGQNGLNIHA 287

Query: 497 QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK------------G 544
            +  N  S       +       P +I     G     + ++ E ++             
Sbjct: 288 NISVNKESIAKLSVQDPPGSHFIPYVIE-PSAGLDRGVLALLTEAYEEETLKDGKKRFVL 346

Query: 545 NLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSH------HLSIETDFRNETINYKIREH 598
            +   L+P++  +  +  +     ++ AN+LK              D  N  I    R H
Sbjct: 347 KIQPHLAPVKIAIIPLKKNDSGLVEK-ANVLKHAIQVLGLGRIAFEDTGN--IGKSYRRH 403

Query: 599 SIKKIPIII-----ICGD-KEASE-RSIGIRRFGSTTTQKVSLLDAIPILTK 643
                P+ I       G  K      ++ +R   S    ++ L +    +  
Sbjct: 404 DEIGTPLCITIDFDTIGKSKNVENHDTVTVRYRDSMEQTRIHLSELENYIKN 455


>gi|325128607|gb|EGC51476.1| alanyl-tRNA synthetase [Neisseria meningitidis N1568]
          Length = 874

 Score = 60.6 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 61/143 (42%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFS 115
            S+     ++ R+  +  HS  H+M +A++ +        G  +  +   +D    Q  +
Sbjct: 544 DSVTAKVDDEIRNANMRNHSATHLMHKALRDVLGRHVEQKGSLVTAESTRFDISHPQAVT 603

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           ++E+A++E+++ E +  +       +S E A++         K          + V + +
Sbjct: 604 AEEIAEVERRVNEAVLANVAVNAAIMSMEDAQKTGAMMLFGEKY--------GDEVRVLQ 655

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G +  +LC G HV  TG +  F
Sbjct: 656 MGGFSTELCGGTHVSRTGDIGLF 678


>gi|330840876|ref|XP_003292434.1| hypothetical protein DICPUDRAFT_157146 [Dictyostelium purpureum]
 gi|325077326|gb|EGC31046.1| hypothetical protein DICPUDRAFT_157146 [Dictyostelium purpureum]
          Length = 686

 Score = 60.6 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 53/142 (37%), Gaps = 15/142 (10%)

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIENFK-----------GNLPLWLSPIQAIVTTIT-- 561
            +  +P +I       + R I  ++E               +LP  ++P++A +  +T  
Sbjct: 524 GKNYYPHVI--EPSFGLGRIIYALLEQNYWTRENDEQRGVLSLPAIIAPVKASILPLTNS 581

Query: 562 SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
              V +  +I+ LLK   +S + D     I  K        IP  I        + ++ +
Sbjct: 582 EKLVPFVAKISKLLKEAGISTKLDDTGNAIGRKYARTDEIGIPFGITIDFTTVEDETVTL 641

Query: 622 RRFGSTTTQKVSLLDAIPILTK 643
           R   +T   ++ + D    L K
Sbjct: 642 RERDTTKQIRIPITDLALTLKK 663



 Score = 41.3 bits (95), Expect = 0.47,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 49/133 (36%), Gaps = 6/133 (4%)

Query: 277 QTLISYMRRKIKDDYEEINTPQV-LDQHLWQQSGHWDS-YRANMFAVKCADDTIKDLRTF 334
           + L   + +    + +E+    V  +    +        Y  N+        +  +    
Sbjct: 191 KELKHVLTKAGDYNQQELKEALVKYNVKAPETGNALSDPYPFNLMFKTEIGPSGNN--PG 248

Query: 335 ALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
            L+P    G    F    + + ++LP   A+ G+ +RNE +    GL+RVR FT  +   
Sbjct: 249 YLRPETAQGIFVNFAKLYEFNGKKLPFAAAQIGNAFRNEIAPR-SGLLRVREFTMAEIEH 307

Query: 394 FCTKEQMFNECLK 406
           F    +  +   +
Sbjct: 308 FVNPNEKTHPKFQ 320


>gi|260753919|ref|YP_003226812.1| histidyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
 gi|258553282|gb|ACV76228.1| histidyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
          Length = 419

 Score = 60.6 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 56/330 (16%), Positives = 104/330 (31%), Gaps = 61/330 (18%)

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P ++A  G V+R E         R R F Q DA V    E   +   ++ +L   + +  
Sbjct: 103 PCKIATHGPVFRYERPQK----GRYRQFHQIDAEVIGAAEPEADV--ELLSLADQLLESL 156

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDA-----------------ENIMKGVL--------- 452
           G  K  V L         S   W  A                 E + +  L         
Sbjct: 157 G-IKQHVTLHLNTLGDSASREAWRAALIEYFQGHFDSLSQESQERLTRNPLRILDSKDPN 215

Query: 453 DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
           D I       I+  +     +F+  K      DA G  W      V      R  AF   
Sbjct: 216 DKIIAEKAPIIDDYLTEEAASFF--KAVTTGLDAAGVAWTRDPRLVRGLDYYRHTAFEFI 273

Query: 513 SHSEKCHPVMIHRAVF------------------GSIERFIGIMIENFKGNLPLWLSPIQ 554
           +        ++    +                    IER + ++I+  K +         
Sbjct: 274 TDQLGAQGTVLAGGRYDGLSEALGGNLTPAIGWAAGIER-LAMLIDEPKEDAMN------ 326

Query: 555 AIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
             V  +   A   A  I + L+   +S +  +R   +  ++++ +   +   +I G++E 
Sbjct: 327 VAVIPLGEEAKNPAISILSKLRHAGISADMSWRGN-MKRRMQKANGWGVRYAVILGEEEL 385

Query: 615 SERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           ++    +R   +   Q ++L   +  +  E
Sbjct: 386 AQNEATVRSMVTGEQQAIALDQIVDRILSE 415


>gi|229093459|ref|ZP_04224562.1| Alanyl-tRNA synthetase [Bacillus cereus Rock3-42]
 gi|228689930|gb|EEL43734.1| Alanyl-tRNA synthetase [Bacillus cereus Rock3-42]
          Length = 791

 Score = 60.6 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 66/161 (40%), Gaps = 15/161 (9%)

Query: 44  NGK-----VCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP 98
           NG+     V +     ++ +++ I     RS  V  H+  H++ +A++ +        G 
Sbjct: 442 NGQNLHQVVVEEGTLKKDAAVKAIIDTKNRSSVVKNHTATHLLHQALKDVLGTHVNQAGS 501

Query: 99  -IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAY 157
            +  +   +DF       +DEL +IE+ + E I           + E+A+E+        
Sbjct: 502 LVTSERLRFDFSHFGQVQADELEKIERIVNEKIWESIDVEISQKAIEEAKEMGAMALFGE 561

Query: 158 KVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
           K          + V + + G++  +LC G HV +T  +  F
Sbjct: 562 KY--------GDVVRVVQVGDYSLELCGGCHVDNTASIGIF 594


>gi|205830105|sp|A4IR80|SYA_GEOTN RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
          Length = 878

 Score = 60.6 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 32/144 (22%), Positives = 57/144 (39%), Gaps = 10/144 (6%)

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDELAQ 121
             E  RS  V  H+  H++ +A++ +        G  +  D   +DF        DEL +
Sbjct: 554 VDEVKRSQIVKNHTATHLLHQALKDVLGRHVNQAGSLVAPDRLRFDFTHFGQVKPDELER 613

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-F 180
           IE  + E I +  P    Y   E+A+ +        K          + V + + G++  
Sbjct: 614 IEAIVNEQIWKSIPVDIFYKPLEEAKAMGAMALFGEKY--------GDIVRVVKVGDYSL 665

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVA 204
           +LC G HV +T  +  F  + +  
Sbjct: 666 ELCGGCHVPNTAAIGLFKIVSESG 689


>gi|75075821|sp|Q4R4U9|SYSC_MACFA RecName: Full=Seryl-tRNA synthetase, cytoplasmic; AltName:
           Full=Serine--tRNA ligase; Short=SerRS; AltName:
           Full=Seryl-tRNA(Ser/Sec) synthetase
 gi|67971068|dbj|BAE01876.1| unnamed protein product [Macaca fascicularis]
          Length = 514

 Score = 60.6 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 57/165 (34%), Gaps = 11/165 (6%)

Query: 271 KGWKIF--QTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
           KG  +F  Q LI Y +R      Y  I TP  + + + Q+      +   ++ V      
Sbjct: 197 KGVLVFLEQALIQYALRTLGSRGYTPIYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGSE 256

Query: 328 IKDLRTFALKP---MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLM 381
             D  ++  K     +     A+         +LP++ A   + +R E         G+ 
Sbjct: 257 KSDDNSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGRDTRGIF 316

Query: 382 RVRGFTQDDAHVFCTKEQ--MFNECLKIHNLIISIYKDFGFEKIM 424
           RV  F + +  V+ +      +    ++       Y+  G    +
Sbjct: 317 RVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHI 361


>gi|27466925|ref|NP_763562.1| seryl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
 gi|57865923|ref|YP_190086.1| seryl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|30173136|sp|Q8CU95|SYS_STAES RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|67461620|sp|Q5HK07|SYS_STAEQ RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|27314467|gb|AAO03604.1|AE016744_7 seryl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
 gi|57636581|gb|AAW53369.1| seryl-tRNA synthetase [Staphylococcus epidermidis RP62A]
          Length = 428

 Score = 60.6 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 51/356 (14%), Positives = 115/356 (32%), Gaps = 32/356 (8%)

Query: 111 EQPFSSDELAQIEKKMQEIIARDSPFLKQYLSH-EKARELFESKKEAYKVEILESIPAKE 169
           E+  S  EL   + K+ + +       ++ +S  E+ +       E    +      A +
Sbjct: 12  EKVKSKIELRGDDPKVVDQVLELDEQRRELISKTEEMKAKRNKVSEEIAQKKRNKEDADD 71

Query: 170 NVTLYRQ-GEWFDLCRGPHVRSTGQVK----KFFKLMKVAGAYWRGDSNRPMLSRIYGTA 224
            +   R  G+              +++    +   L+         D     + + +GT 
Sbjct: 72  VIAEMRHLGDEIKDIDNQLNEVDNKIRDILIRIPNLINEDVPQGASDEENVEVKK-WGTP 130

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR 284
            + + E   +   +EE +  D  + A+      +             G  + + L++YM 
Sbjct: 131 RDFEFEPKAHWDLVEELKMADFERAAKVSGARFVYLTK--------DGALLERALMNYML 182

Query: 285 RKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
            K   +  Y E+ TPQ+++      +G    +  ++F V        +       P    
Sbjct: 183 TKHTTQHGYTEMMTPQLVNADTMFGTGQLPKFEEDLFKV--------EKEGLYTIPTAEV 234

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQ 399
                +   +     LP       + +R+E   +     GL+R+  F + +       E 
Sbjct: 235 PLTNFYRDEIIQPGVLPELFTAQTACFRSEAGSAGRDTRGLIRLHQFDKVEMVRIVQPED 294

Query: 400 MFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
            ++   ++     +I ++ G     V L T              +W  + N  K +
Sbjct: 295 SWDALEEMTQNAEAILEELGLPYRRVILCTGDIGFSASKTYDLEVWLPSYNDYKEI 350


>gi|256752916|ref|ZP_05493749.1| alanyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
 gi|256748196|gb|EEU61267.1| alanyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
          Length = 757

 Score = 60.6 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 61/139 (43%), Gaps = 10/139 (7%)

Query: 67  PRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDELAQIEKK 125
            R  A   H+  H++ +A++ I  +     G  + +D   +DF   Q  + +EL QIE +
Sbjct: 555 SRRNAARNHTATHLLHKALKEILGDHVHQAGSLVADDRLRFDFSHYQAVTKEELKQIENR 614

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCR 184
           + E I +      +  ++++A +         K          + V + +  ++  +LC 
Sbjct: 615 VNEKIYQSLNVHIEEKTYDEAVKEGAVALFTEKY--------GDKVRVVKIDDYSMELCG 666

Query: 185 GPHVRSTGQVKKFFKLMKV 203
           G HV++T ++  F  + + 
Sbjct: 667 GTHVKNTNEIGIFKIVSES 685


>gi|332638292|ref|ZP_08417155.1| histidine--tRNA ligase [Weissella cibaria KACC 11862]
          Length = 436

 Score = 60.6 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 62/395 (15%), Positives = 129/395 (32%), Gaps = 62/395 (15%)

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF-- 348
           Y E+ TP      ++ +S       +++   +  D   K  R  AL+P    G V  F  
Sbjct: 39  YSEVRTPIFESFDVFARS---AGDTSDVVTKEMYDFHDKGDRHVALRPEGTAGVVRAFVE 95

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
           N       + P ++   G ++R E   +     R+R F Q       +     +   ++ 
Sbjct: 96  NKLFGPEHQKPYKMFYIGPMFRYERPQA----GRMRQFHQIGVEALGSDSPALDA--EVI 149

Query: 409 NLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA-ENIMKGVLDTIKNSSQDRINT-- 465
            + +  ++  G   +  K+         S   +  A  N +    D +   SQ R+    
Sbjct: 150 AMAVDFFQTLGVTNL--KVKINSLGDKASRENYRQALINFLTPHFDELSADSQTRLEKNP 207

Query: 466 ----------------------GVLLGEGAFYGPKFEYILKDAIGRDWQCGT---IQVDF 500
                                   L      +  K +  L+ A+G D++        +D+
Sbjct: 208 LRVLDSKDAKDQAIVADAPSILDYLTESAQAHWDKVQTYLE-AMGIDYEVDANVVRGLDY 266

Query: 501 NLPSRFNAFYVNSH------------------SEKCHPVMIHRAVFGSIERFIGIMIENF 542
              + F     +                     E   P M        +ER + +++E+ 
Sbjct: 267 YNHTIFEVMTQSEALGHGWTTITGGGRYNGLVEEFGGPEMPGVGFGIGLERLM-LLLESE 325

Query: 543 KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKK 602
              LP   +P+   V          A ++   ++S   S E D+++  +  + +      
Sbjct: 326 GATLPE-QAPLDVYVANTGDGTDVVAMQMVQAVRSFGYSAERDYQDRKLKGQFKSADRLG 384

Query: 603 IPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
              +I  G++E +E+S  ++   +     V L + 
Sbjct: 385 ARFMITIGERELAEQSANLKNMTTGKEITVKLAEL 419


>gi|315142794|gb|ADT80972.1| glutamyl- and prolyl-tRNA synthetase [Myrmekiaphila foliata]
 gi|315142796|gb|ADT80973.1| glutamyl- and prolyl-tRNA synthetase [Myrmekiaphila foliata]
          Length = 148

 Score = 60.6 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 52/143 (36%), Gaps = 19/143 (13%)

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           GA +    E  +  A GR  Q  T   +  N    F   + +  + +     +++  +G 
Sbjct: 9   GADFTTTVEAYVP-ANGRAIQGATSHHLGQNFSKMFEIVFEHPDTVEKQ--YVYQNSWGL 65

Query: 531 IERFIGIMIENFKGNLPLWL----SPIQAIVTTITSSA----------VEYAQEIANLLK 576
             R IG+ +     N  L L    +P Q ++     +A           E  + +   L+
Sbjct: 66  SSRSIGVAVMVHGDNAGLVLPPRVAPHQVVIVPCGVTANLPESEKKLLAEKCEALEKELR 125

Query: 577 SHHLSIETDFR-NETINYKIREH 598
              + ++ D+R N +  +K    
Sbjct: 126 EASIRVKGDYRENYSPGWKFNHW 148


>gi|228993127|ref|ZP_04153049.1| Alanyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
 gi|228999175|ref|ZP_04158757.1| Alanyl-tRNA synthetase [Bacillus mycoides Rock3-17]
 gi|229006723|ref|ZP_04164357.1| Alanyl-tRNA synthetase [Bacillus mycoides Rock1-4]
 gi|228754584|gb|EEM03995.1| Alanyl-tRNA synthetase [Bacillus mycoides Rock1-4]
 gi|228760792|gb|EEM09756.1| Alanyl-tRNA synthetase [Bacillus mycoides Rock3-17]
 gi|228766586|gb|EEM15227.1| Alanyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
          Length = 880

 Score = 60.6 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 35/161 (21%), Positives = 66/161 (40%), Gaps = 15/161 (9%)

Query: 44  NGK-----VCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP 98
           NG+     V +     +E +++ I     RS  V  H+  HI+ +A++ +        G 
Sbjct: 531 NGQSLHKIVVEEGTLTKESAVKAIIDTKNRSSVVKNHTATHILHQALKDVLGTHVNQAGS 590

Query: 99  -IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAY 157
            +  +   +DF       +DEL +IE+ + E I           + E+A+E+        
Sbjct: 591 LVTSERLRFDFSHFGQVQADELEKIERIVNEKIWESIDVEISQKAIEEAKEMGAMALFGE 650

Query: 158 KVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
           K          + V + + G++  +LC G HV +T  +  F
Sbjct: 651 KY--------GDVVRVVQVGDYSLELCGGCHVDNTASIGIF 683


>gi|182679617|ref|YP_001833763.1| seryl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC 9039]
 gi|238691238|sp|B2IJG1|SYS_BEII9 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|182635500|gb|ACB96274.1| seryl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC 9039]
          Length = 436

 Score = 60.6 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 42/237 (17%), Positives = 75/237 (31%), Gaps = 15/237 (6%)

Query: 220 IYGTAWNTQQELTQYLYFLEESE-KRDHRKLAREMDLFHI--AEDGSGVIFWHRKG--WK 274
            +G   N   EL         S   ++H  +   + L     A   SG  F   KG   +
Sbjct: 114 PFGRDENDNPELRVVGEKPVFSFVPKEHFDIGEGLGLMDFEAAAKLSGARFVVNKGPLAR 173

Query: 275 IFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK-CADDTIKDL 331
           + + L  +M      +  Y E+N P +        +        +MFA            
Sbjct: 174 LERALGQFMLDLHTGEHGYTEVNPPILARDDALFGTAQLPKLEEDMFAAHAGRVPQEAAG 233

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQ 388
             + L P +      +    +   ++LP+R       +R E   +     G++R   FT+
Sbjct: 234 DLYWLIPTSEVVLTNLVRETILDEKQLPLRFTACTPCFRAEAGSAGRDTRGMIRQHQFTK 293

Query: 389 DDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALW 441
            +     T E+   E  ++      + K  G    +V L T              +W
Sbjct: 294 TELVSITTPEEALVEHERMLTCAEEVLKRLGLAYRVVTLCTGDMGFASQKTYDIEVW 350


>gi|150021161|ref|YP_001306515.1| alanyl-tRNA synthetase [Thermosipho melanesiensis BI429]
 gi|205830274|sp|A6LMH9|SYA_THEM4 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|149793682|gb|ABR31130.1| alanyl-tRNA synthetase [Thermosipho melanesiensis BI429]
          Length = 859

 Score = 60.6 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 28/166 (16%), Positives = 65/166 (39%), Gaps = 16/166 (9%)

Query: 41  VAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-I 99
             + GK+      V +     +  +  R      H+  H++  A++ +        G  +
Sbjct: 525 GKLKGKIR-----VGDAIFASVDEK-KRKATARNHTATHLLHAALRKVLGTHVRQAGSLV 578

Query: 100 IEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKV 159
             +   +DF      + +E+ +IEK + E I        + +S+++A +         K 
Sbjct: 579 APERLRFDFTHYAALTKEEIEKIEKMVNEKILEAIDVNTKVMSYDEAIKNGAMALFEEKY 638

Query: 160 EILESIPAKENVTLYRQGEWFDL-CRGPHVRSTGQVKKFFKLMKVA 204
                    + V + R  ++ +  C G HV++TG++  F  + + +
Sbjct: 639 --------GDKVRVVRIRDFSEELCGGTHVKNTGEIGLFKIISESS 676


>gi|118431143|ref|NP_147398.2| histidyl-tRNA synthetase [Aeropyrum pernix K1]
 gi|150421678|sp|Q9YEB2|SYH_AERPE RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|116062467|dbj|BAA79634.2| histidyl-tRNA synthetase [Aeropyrum pernix K1]
          Length = 435

 Score = 60.6 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 40/215 (18%), Positives = 82/215 (38%), Gaps = 19/215 (8%)

Query: 435 VGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCG 494
            GS+    +A + ++ +L ++ +  +  ++  ++ G   + GP  E +L      + + G
Sbjct: 238 YGSNEKVREALDHLEEML-SLADDKRVELDMSLVRGLDYYTGPILEVVLD-----EPRIG 291

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPI- 553
           ++        R++               +   +    ER I   +E   G   L +  + 
Sbjct: 292 SVAGGG----RYDGLVGMFAGRDIPATGVSIGI----ERIIDAGLE--LGVYSLDVKTVA 341

Query: 554 QAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKE 613
           Q  V  +      YA E A +L+   L++  D    +   + R+ S   IP++   G KE
Sbjct: 342 QVAVVVLDRRYYRYAWEAARILRRGGLNVRIDLSRASGQVQRRKASRLGIPVLAFVGAKE 401

Query: 614 ASERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
           A    + +          V L +A+  +  E L P
Sbjct: 402 AEGGFLTLYSAAKGERVAVPLGEAVKAV--ERLLP 434


>gi|91226055|ref|ZP_01260982.1| seryl-tRNA synthetase [Vibrio alginolyticus 12G01]
 gi|269967795|ref|ZP_06181842.1| seryl-tRNA synthetase [Vibrio alginolyticus 40B]
 gi|91189496|gb|EAS75773.1| seryl-tRNA synthetase [Vibrio alginolyticus 12G01]
 gi|269827615|gb|EEZ81902.1| seryl-tRNA synthetase [Vibrio alginolyticus 40B]
          Length = 435

 Score = 60.6 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 39/248 (15%), Positives = 84/248 (33%), Gaps = 16/248 (6%)

Query: 220 IYGTAWNTQQELTQYLY-FLEESEKRDHRKLAREMD--LFHIAEDGSGVIFWHRKG--WK 274
             G   N   E++++      + E +DH  L    D   F  A   +G  F   KG   +
Sbjct: 114 PDGKDENDNVEISRWGEPKSYDFELKDHVDLGEMGDGLDFASAVKITGARFIVMKGQFAR 173

Query: 275 IFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL- 331
           + + +  +M     +   Y E+  P +++      +G    +  ++F  +   + + D  
Sbjct: 174 LHRAIAQFMLDLHTEEHGYTEMYVPYLVNSDSLFGTGQLPKFGKDLFHTEPLAEKVNDEE 233

Query: 332 -RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
            R  +L P        +    +    +LP+++      +R+E         GL+R+  F 
Sbjct: 234 PRKLSLIPTAEVPVTNLVRDTISDEADLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFD 293

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E   N   ++      + +        V L T              +W  
Sbjct: 294 KVELVQITKPEDSMNALEELTGHAEKVLQLLELPYRKVVLCTGDMGFGARKTYDLEVWVP 353

Query: 444 AENIMKGV 451
           A+   + +
Sbjct: 354 AQETYREI 361


>gi|28199204|ref|NP_779518.1| seryl-tRNA synthetase [Xylella fastidiosa Temecula1]
 gi|182681934|ref|YP_001830094.1| seryl-tRNA synthetase [Xylella fastidiosa M23]
 gi|32130164|sp|Q87BX8|SYS_XYLFT RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|238691047|sp|B2I631|SYS_XYLF2 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|28057310|gb|AAO29167.1| seryl-tRNA synthetase [Xylella fastidiosa Temecula1]
 gi|182632044|gb|ACB92820.1| seryl-tRNA synthetase [Xylella fastidiosa M23]
 gi|307578190|gb|ADN62159.1| seryl-tRNA synthetase [Xylella fastidiosa subsp. fastidiosa GB514]
          Length = 426

 Score = 60.6 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 25/188 (13%), Positives = 66/188 (35%), Gaps = 15/188 (7%)

Query: 273 WKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L   M      +  YEE+N P +++      +G    +  +MF+ +  +     
Sbjct: 171 ARLHRALAQCMLDLHVSQHGYEEVNVPIIVNADSLHGTGQLPKFEEDMFSTQLGEH---- 226

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
            R + +   +      +  + +     LP+R+      +R+E         G++R   F 
Sbjct: 227 -RRYLIS-TSEISLTNLVRNEIIEADRLPLRMVAHSLCFRSEAGSGGRDTRGMIRQHQFE 284

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALWDD 443
           + +    C  +    E  ++     ++ +  G     + L T              +W  
Sbjct: 285 KVELVSVCKPQDSEGEHHRMTRCAETVLEMLGLPYRKILLCTGDMGFAATKTYDLEVWLP 344

Query: 444 AENIMKGV 451
           ++ + + +
Sbjct: 345 SQGMYREI 352


>gi|319787421|ref|YP_004146896.1| histidyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1]
 gi|317465933|gb|ADV27665.1| histidyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1]
          Length = 477

 Score = 60.6 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 32/204 (15%), Positives = 65/204 (31%), Gaps = 19/204 (9%)

Query: 446 NIMKGVLDTIKNSSQDR----INTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFN 501
             ++ VL+ ++          +N  +  G   + G  +E  L +  G    C        
Sbjct: 278 AELREVLELVRALGVPESAYCLNFSIARGLDYYTGTVYETQLVEHPGIGSICSG------ 331

Query: 502 LPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI-GIMIENFKGNLPLWLSPIQAIVTTI 560
              R+     +    K   V I   +     +     +IE          S +QA+V  +
Sbjct: 332 --GRYEDLASHYTKSKLPGVGISIGLTRLFWQLREAGLIEGIAE------SSVQAMVALM 383

Query: 561 TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
             + +  A +IA  L+   ++ E       I  + +  S   I  +++ G  E     + 
Sbjct: 384 DENQLADALDIARHLRLGGINTEVQMEPRKIGKQFQYASRAGIRFVVLAGPDELERGVVA 443

Query: 621 IRRFGSTTTQKVSLLDAIPILTKE 644
           ++         V   +    L  E
Sbjct: 444 VKDLVREQQFDVPRGELAETLKVE 467



 Score = 38.2 bits (87), Expect = 3.9,   Method: Composition-based stats.
 Identities = 40/228 (17%), Positives = 71/228 (31%), Gaps = 17/228 (7%)

Query: 259 AEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ-------VLDQHLWQQSGH 310
               +GV+    +    FQ ++  +RR  +   +  + TP        +       +   
Sbjct: 11  PRTPAGVMELLPREQIAFQRMLDVIRRNYERFGFLPVETPVFELSDVLLTKSGGETERQV 70

Query: 311 WDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL--PVRLAEFGSV 368
           +        A   A+     L   AL+       V +  +  +   EL  P R  +   V
Sbjct: 71  YFVQSTGALANAAAEGAAGGLPEMALRF---DLTVPLARYVAEHEHELSFPFRRYQMQRV 127

Query: 369 YRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLS 428
           YR E +       R R F Q D  V            ++  +I S++ + G     V+L+
Sbjct: 128 YRGERAQR----GRFREFYQCDIDVIGKDTLSIRYDAEVLAVIHSVFSELGIGAFRVQLN 183

Query: 429 TRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG 476
            R   R   +A           VL  +    +           G  +G
Sbjct: 184 NRKLMRGFFEAQGVADPQQQALVLREVDKIDKRGPQYVRETLAGPDFG 231


>gi|313123580|ref|YP_004033839.1| histidyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
 gi|312280143|gb|ADQ60862.1| Histidyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
 gi|325684223|gb|EGD26399.1| histidine--tRNA ligase [Lactobacillus delbrueckii subsp. lactis DSM
           20072]
          Length = 428

 Score = 60.6 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 70/430 (16%), Positives = 135/430 (31%), Gaps = 86/430 (20%)

Query: 276 FQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           ++ +    R   K  +Y EI TP   +  L+ +S       +++   +  D   K  R  
Sbjct: 20  WEKVEQTARDLFKRANYHEIRTPSFENYELFSRSSGET---SDVVEKEMYDFEDKGGRHI 76

Query: 335 ALKPMNCPGHVAVFNHGLKSYREL--PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
           AL+P    G V  +        +   P  +    ++YR E   +     R R F Q    
Sbjct: 77  ALRPEGTAGVVRAYVENKIYGPDYVKPFNVYYIAAMYRYERPQA----GRQREFHQIGVE 132

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
            F +    +   ++   L   +  + G +   + ++T  +  V   A  D   +    V 
Sbjct: 133 SFGSD--GYLADVETILLGHDLLAELGVKNYELHINTLGDSEV-RQAYHDALVDYFTPVK 189

Query: 453 DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ-----CGTIQ--VDFNLPSR 505
           D +   SQ R+              K    + D+   + Q        I+  +D      
Sbjct: 190 DQLSEDSQRRLG-------------KNPLRILDSKAEEDQQFLPEAPKIRDYLDEESKEN 236

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI--------- 556
           FN    +   +     +I   +   ++ + G++ E    +  LW SP   +         
Sbjct: 237 FNKILASLD-KLGVKYVIDDDLVRGLDYYTGVIFEFMVDDPTLWASPSTVLGGGRYNHLV 295

Query: 557 ----------------------------------------VTTITSSAVEYAQEIANLLK 576
                                                   +T I       A E+A  L+
Sbjct: 296 EEFSGPETPAVGFGIGEERLMLVLSKQNPEMFEDQGIDFFITNIGEGTDIKAVEVARQLR 355

Query: 577 SHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV---S 633
           S   S + D   + +  + R+        ++  G KE +E  + ++R        +    
Sbjct: 356 SLGFSAQYDVDQKKLKAQFRKADRVGARYVVTLGAKELAEGKLTVKRLSDGQQFSLEFTD 415

Query: 634 LLDAIPILTK 643
           L D   +L+K
Sbjct: 416 LEDKANLLSK 425


>gi|149708708|ref|XP_001494147.1| PREDICTED: similar to Seryl-tRNA synthetase, cytoplasmic
           (Seryl-tRNA(Ser/Sec) synthetase) (Serine--tRNA ligase)
           (SerRS) isoform 1 [Equus caballus]
          Length = 513

 Score = 60.6 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 57/165 (34%), Gaps = 11/165 (6%)

Query: 271 KGWKIF--QTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
           KG  +F  Q LI Y +R      Y  I TP  + + + Q+      +   ++ V      
Sbjct: 196 KGVLVFLEQALIHYALRTLRNRGYTPIYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGSE 255

Query: 328 IKDLRTFALKP---MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLM 381
             D  ++  K     +     A+         +LP++ A   + +R E         G+ 
Sbjct: 256 KSDDNSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGRDTRGIF 315

Query: 382 RVRGFTQDDAHVFCTKEQ--MFNECLKIHNLIISIYKDFGFEKIM 424
           RV  F + +  V+ +      +    ++       Y+  G    +
Sbjct: 316 RVHQFEKIEQFVYSSPHDNKSWEMFEEMIATAEEFYQSLGIPYHI 360


>gi|138896126|ref|YP_001126579.1| alanyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
 gi|134267639|gb|ABO67834.1| Alanyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
          Length = 892

 Score = 60.6 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 32/144 (22%), Positives = 57/144 (39%), Gaps = 10/144 (6%)

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDELAQ 121
             E  RS  V  H+  H++ +A++ +        G  +  D   +DF        DEL +
Sbjct: 568 VDEVKRSQIVKNHTATHLLHQALKDVLGRHVNQAGSLVAPDRLRFDFTHFGQVKPDELER 627

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-F 180
           IE  + E I +  P    Y   E+A+ +        K          + V + + G++  
Sbjct: 628 IEAIVNEQIWKSIPVDIFYKPLEEAKAMGAMALFGEKY--------GDIVRVVKVGDYSL 679

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVA 204
           +LC G HV +T  +  F  + +  
Sbjct: 680 ELCGGCHVPNTAAIGLFKIVSESG 703


>gi|90579108|ref|ZP_01234918.1| seryl-tRNA synthetase [Vibrio angustum S14]
 gi|90439941|gb|EAS65122.1| seryl-tRNA synthetase [Vibrio angustum S14]
          Length = 435

 Score = 60.6 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 25/190 (13%), Positives = 62/190 (32%), Gaps = 11/190 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + +  +M     +   Y E+  P +++      +G    +  ++F  +   + + D
Sbjct: 172 ARLHRAIAQFMLDLHTEEHGYTEMYVPYLVNADSLFGTGQLPKFGEDLFHTQPLTEKVND 231

Query: 331 L--RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRG 385
              R  +L P        +    +    +LPV++      +R+E         GL+R+  
Sbjct: 232 EEPRVLSLIPTAEVPVTNMMRDTITDEADLPVKMTAHTPCFRSEAGSYGRDTRGLIRMHQ 291

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALW 441
           F + +       E       ++      + +        V L T              +W
Sbjct: 292 FDKVELVQITKPEDSMAALEELTGHAEKVLQLLELPYRKVVLCTGDMGFGACKTYDLEVW 351

Query: 442 DDAENIMKGV 451
             A+   + +
Sbjct: 352 VPAQETYREI 361


>gi|307130790|ref|YP_003882806.1| seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with
           serine [Dickeya dadantii 3937]
 gi|306528319|gb|ADM98249.1| seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with
           serine [Dickeya dadantii 3937]
          Length = 431

 Score = 60.6 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 64/188 (34%), Gaps = 10/188 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M         YEE   P +++      +G    ++ ++F  +  ++   +
Sbjct: 171 ARLHRALAQFMLNLHTAEHGYEEAYVPYLVNHATLYGTGQLPKFKEDLFHTRPLEEEA-E 229

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
              +AL P        +    +     LP++L      +R+E       + GL+RV  F 
Sbjct: 230 SSNYALIPTAEVPLTNLVRDEILDEESLPIKLTAHTPCFRSEAGSYGRDMRGLIRVHQFD 289

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E       ++ +    + +        V L +              +W  
Sbjct: 290 KVEMVQIVRPEDSMQALEELTSHAEKVLQLLKLPYRKVLLCSGDMGFGACKTYDLEVWLP 349

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 350 AQNTYREI 357


>gi|239637564|ref|ZP_04678536.1| histidyl-tRNA synthetase [Staphylococcus warneri L37603]
 gi|239596782|gb|EEQ79307.1| histidyl-tRNA synthetase [Staphylococcus warneri L37603]
          Length = 420

 Score = 60.6 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 17/87 (19%), Positives = 38/87 (43%)

Query: 557 VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASE 616
           + T+   A  YA ++ N L+ + +  + D+ N  I  ++++         I+ GD+E   
Sbjct: 334 IVTMGEQADRYAVKLLNELRKNGVKADKDYLNRKIKGQMKQADRLNANYTIVIGDQELEN 393

Query: 617 RSIGIRRFGSTTTQKVSLLDAIPILTK 643
             I I+   +  ++ + L   +    K
Sbjct: 394 NQIDIKNMETGESESIQLDQIVDYFHK 420


>gi|56476109|ref|YP_157698.1| histidyl-tRNA synthetase [Aromatoleum aromaticum EbN1]
 gi|81677555|sp|Q5P7B4|SYH_AZOSE RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|56312152|emb|CAI06797.1| histidyl-tRNA synthetase [Aromatoleum aromaticum EbN1]
          Length = 438

 Score = 60.6 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 64/425 (15%), Positives = 135/425 (31%), Gaps = 70/425 (16%)

Query: 269 HRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
                + ++     +R  ++   Y  I  P V    L++++    +           D  
Sbjct: 21  LPDEAEAWEHFEDIVRDWLRSYGYRPIRMPIVEPTPLFKRAIGEVTDIVEKEMYSFED-- 78

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELP---VRLAEFGSVYRNEPSGSLHGLMRVR 384
             +     L+P    G  +     ++ ++ L     RL   G ++R+E         R R
Sbjct: 79  ALNGEQLTLRP---EGTASCVRAAIQ-HKMLSAGAQRLYYHGPMFRHERPQK----GRYR 130

Query: 385 GFTQD--DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK---------------- 426
            F Q   +A  F   +      L    +   ++ DFG E + ++                
Sbjct: 131 QFHQIGVEALGFDGPDIDAEHIL----MCARLWDDFGLEDVRLELNSLGSSDERARHRAE 186

Query: 427 ---LSTRPEKRVGSDALWDDAENIMK------GVLDTIKNSSQDRINTGVLLGEGAFYGP 477
                 R  +R+  D       N ++        L  + +++   ++         F G 
Sbjct: 187 LVAYLERHRERLDDDGRRRLHTNPLRILDTKNPELQDLVDNAPKLLDFLGEDSLKHFNG- 245

Query: 478 KFEYILKDAIGRDWQCGTI--QVDFNLPSRFN--AFYVNSHSE--------------KCH 519
             + +LKDA         +   +D+   + F      + +                    
Sbjct: 246 -VQVLLKDAGVPYRINHRLVRGLDYYNRTVFEWVTTRLGAQGTVCAGGRYDGLVEQLGGR 304

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH 579
           P        G IER + +  E+     P   +     V  +   A   A   A  L+SH 
Sbjct: 305 PAPAAGFAMG-IERLLALWRESGGEAEP---AQPDVYVVHLGEQAQRLAFRAAEALRSHG 360

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIR-RFGSTTTQKVSLLDAI 638
            ++       +   ++++      P+ ++ GD EA+   +G++   G    Q+V+L    
Sbjct: 361 FAVLMHCGGGSFKSQMKKADASGAPVAVVIGDDEAATGEVGLKPLRGPGGQQRVALDGLA 420

Query: 639 PILTK 643
             + +
Sbjct: 421 NAVAE 425


>gi|315924764|ref|ZP_07920981.1| alanine--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263]
 gi|315621663|gb|EFV01627.1| alanine--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263]
          Length = 882

 Score = 60.6 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 66/155 (42%), Gaps = 11/155 (7%)

Query: 45  GKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDG 103
           GKV   S    +  I  +   D  +     H+  H++ +A++ +  +     G  +  D 
Sbjct: 540 GKVESGSFKTGQTVISEVNKADRMA-TARNHTATHMLQKALKQVLGDHVEQAGSFVSPDR 598

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE 163
             +DF+  QP +++E+A++E  + ++I    P        ++A++L        K   + 
Sbjct: 599 LRFDFNHFQPMTAEEIARVETIVNQVILEAMPVTIFETDIDEAKKLGAMALFGEKYGNI- 657

Query: 164 SIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
                  V + R G++  +LC G H+ +  Q   F
Sbjct: 658 -------VRVVRVGDYSIELCGGTHLTNAAQAGMF 685


>gi|323345458|ref|ZP_08085681.1| serine--tRNA ligase [Prevotella oralis ATCC 33269]
 gi|323093572|gb|EFZ36150.1| serine--tRNA ligase [Prevotella oralis ATCC 33269]
          Length = 430

 Score = 60.6 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 35/213 (16%), Positives = 74/213 (34%), Gaps = 20/213 (9%)

Query: 246 HRKLAREMDLFHIA----EDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQVL 300
           H  L ++ +L          G+G   +  K  ++ + L ++ +    K  Y E+  P V+
Sbjct: 144 HWDLCKKYNLVDFDLGVKITGAGFPIYIGKMARLQRALEAFFLDEARKSGYLEVQPPFVV 203

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +    + SG    Y       K       +L    L P        +F   +   +ELP+
Sbjct: 204 N----EVSG----YGTGQLPDKEGQMYHANLDNLYLIPTAEVPVTNIFRDTILEEKELPI 255

Query: 361 RLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           +   + + +R E       + GL R+  F + +     T E  +    ++ + +  + K 
Sbjct: 256 KRCAYSACFRREAGSYGKDVRGLNRLHQFDKVELVRIDTPEHSYQSLQEMLDHVEGLCKK 315

Query: 418 FGFEKIMVKLSTRPEKRV----GSDALWDDAEN 446
                 ++ L    +           +W  A+ 
Sbjct: 316 LELPYHILLLCGGDQSFTSSICYDFEVWSAAQK 348


>gi|313893025|ref|ZP_07826602.1| alanine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
 gi|313442378|gb|EFR60793.1| alanine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
          Length = 871

 Score = 60.6 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 35/160 (21%), Positives = 63/160 (39%), Gaps = 11/160 (6%)

Query: 45  GKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIED 102
           G V + S  + EG  + +    + RS     H+  H++  A++ I  +     G  +  D
Sbjct: 527 GTVVEGS--ISEGDDVALEVDTNRRSAMARNHTATHLLHAALKQILGDHVNQAGSLVTPD 584

Query: 103 GFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL 162
              +DF    P + +EL QIE  + E + + +      +S ++A+E         K   +
Sbjct: 585 YLRFDFTHFSPVTQEELDQIEALVNEEVLKATDLAIAEMSMDEAKEKGAMALFGDKYGDV 644

Query: 163 ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMK 202
             +           G   +LC G HV +T  V  F    +
Sbjct: 645 VRVVEVP-------GFSVELCGGSHVGNTAFVGSFRLTSE 677


>gi|254670010|emb|CBA04754.1| Alanyl-tRNA synthetase [Neisseria meningitidis alpha153]
          Length = 885

 Score = 60.6 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 61/143 (42%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFS 115
            S+     ++ R+  +  HS  H+M +A++ +        G  +  +   +D    Q  +
Sbjct: 555 DSVTAKVDDEIRNANMRNHSATHLMHKALRDVLGRHVEQKGSLVTAESTRFDISHPQAVT 614

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           ++E+A++E+++ E +  +       +S E A++         K          + V + +
Sbjct: 615 AEEIAEVERRVNEAVLANVAVNAAIMSMEDAQKTGAMMLFGEKY--------GDEVRVLQ 666

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G +  +LC G HV  TG +  F
Sbjct: 667 MGGFSTELCGGTHVSRTGDIGLF 689


>gi|118587514|ref|ZP_01544938.1| seryl-tRNA synthetase [Oenococcus oeni ATCC BAA-1163]
 gi|118431965|gb|EAV38707.1| seryl-tRNA synthetase [Oenococcus oeni ATCC BAA-1163]
          Length = 439

 Score = 60.6 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 68/188 (36%), Gaps = 15/188 (7%)

Query: 272 GWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G ++ + + ++M     ++ Y E+ TP ++       +G +  +  + +        +  
Sbjct: 181 GARLERAVYNFMLDEHRREGYTELLTPYMVTNESMYATGQFPKFVDDAY-------EVGK 233

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE---PSGSLHGLMRVRGFT 387
            ++  + P      V      +    ELP+ +      +R E         GL+R+  F 
Sbjct: 234 NQSMTMIPTAEVALVNWRRDEVLDESELPLYITALSPAFRQEAGAAGKDTRGLIRLHQFN 293

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +   F   E  +NE  K+     +I +       +++LST              +W  
Sbjct: 294 KVEMVKFTKPEDSYNELEKMTVDAENILQKLELPYHVIRLSTGDMGFGSAMTYDLEVWFP 353

Query: 444 AENIMKGV 451
            ++  + +
Sbjct: 354 TQDKYREI 361


>gi|27806419|ref|NP_776600.1| seryl-tRNA synthetase, cytoplasmic [Bos taurus]
 gi|18202925|sp|Q9GMB8|SYSC_BOVIN RecName: Full=Seryl-tRNA synthetase, cytoplasmic; AltName:
           Full=Serine--tRNA ligase; Short=SerRS; AltName:
           Full=Seryl-tRNA(Ser/Sec) synthetase
 gi|9945026|gb|AAG03084.1|AF297553_1 seryl-tRNA synthetase [Bos taurus]
 gi|296489322|gb|DAA31435.1| seryl-tRNA synthetase [Bos taurus]
          Length = 514

 Score = 60.6 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 28/165 (16%), Positives = 57/165 (34%), Gaps = 11/165 (6%)

Query: 271 KGWKIF--QTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
           KG  +F  Q LI + +R      Y  I TP  + + + Q+      +   ++ V      
Sbjct: 197 KGVLVFLEQALIQFALRTLASRGYTPIYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGSE 256

Query: 328 IKDLRTFALKP---MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLM 381
             D  ++  K     +     A+         +LP++ A   + +R E         G+ 
Sbjct: 257 KSDDNSYEEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGRDTRGIF 316

Query: 382 RVRGFTQDDAHVFCTKEQ--MFNECLKIHNLIISIYKDFGFEKIM 424
           RV  F + +  V+ +      +    ++       Y+  G    +
Sbjct: 317 RVHQFEKIEQFVYSSPHDNKSWEMFEEMIATAEEFYQSLGIPYHI 361


>gi|325132719|gb|EGC55402.1| alanyl-tRNA synthetase [Neisseria meningitidis M6190]
          Length = 881

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 61/143 (42%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFS 115
            S+     ++ R+  +  HS  H+M +A++ +        G  +  +   +D    Q  +
Sbjct: 551 DSVTAKVDDEIRNANMRNHSATHLMHKALRDVLGRHVEQKGSLVTAESTRFDISHPQAVT 610

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           ++E+A++E+++ E +  +       +S E A++         K          + V + +
Sbjct: 611 AEEIAEVERRVNEAVLANVAVNAAIMSMEDAQKTGAMMLFGEKY--------GDEVRVLQ 662

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G +  +LC G HV  TG +  F
Sbjct: 663 MGGFSTELCGGTHVSRTGDIGLF 685


>gi|321441339|gb|ADW85084.1| glu- + pro-tRNA synthetase [Tineola bisselliella]
          Length = 134

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 49/133 (36%), Gaps = 18/133 (13%)

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           G  Y    E  +  A GR  Q  T   +  N    F   Y +  +++     + +  +G 
Sbjct: 1   GGDYTTTVEAYVP-ASGRGIQGATSHHLGQNFSKMFEIIYDDPETQEKK--YVFQNSWGL 57

Query: 531 IERFIGIMI----ENFKGNLPLWLSPIQAIVTT----------ITSSAVEYAQEIANLLK 576
             R IG+MI    ++    LP  ++ +Q IV               +  E  +E+   L 
Sbjct: 58  TTRTIGVMILVHGDDRGLVLPPRVAAVQVIVVPCGITANSTAEDRENLKESCEELVKKLV 117

Query: 577 SHHLSIETDFRNE 589
              +  E D+R+ 
Sbjct: 118 DAGVRAEGDYRDN 130


>gi|313902776|ref|ZP_07836173.1| seryl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965]
 gi|313466896|gb|EFR62413.1| seryl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965]
          Length = 424

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/241 (14%), Positives = 72/241 (29%), Gaps = 25/241 (10%)

Query: 210 GDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWH 269
            D+   +  R +GT      E   +          D  + A+                + 
Sbjct: 116 DDAGDNVEVRRWGTPPEFGFEPRAHWDLGPALGILDFERAAKITGARFT--------VFR 167

Query: 270 RKGWKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
             G ++ + LI +M         Y E+  P ++ +     +G    +  + F V  +D  
Sbjct: 168 GLGARLVRALIQFMLDLHTREHGYTEVLPPFLVHRQSMIGTGQLPKFEEDAFRVADSD-- 225

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVR 384
                 F L P        ++   +    +LP+    +   +R E   +     GL+R  
Sbjct: 226 ------FYLVPTAEVPVTNLYRDEILDAGQLPIYHVAYTPCFRAEAGSAGRDTRGLIRQH 279

Query: 385 GFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI----MVKLSTRPEKRVGSDAL 440
            F + +   F   E    E  K+     ++ +  G                + R     +
Sbjct: 280 QFDKVELVKFVRPEASPEEHEKLVADAEAVLQRLGLPYRVVLICTGDMGFAQARQYDLEV 339

Query: 441 W 441
           W
Sbjct: 340 W 340


>gi|302349282|ref|YP_003816920.1| Histidyl-tRNA synthetase [Acidilobus saccharovorans 345-15]
 gi|302329694|gb|ADL19889.1| Histidyl-tRNA synthetase [Acidilobus saccharovorans 345-15]
          Length = 432

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/93 (19%), Positives = 38/93 (40%)

Query: 551 SPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           +  Q +V  +   +  YA  +A++L+S   S+  D      + + R      +P++   G
Sbjct: 337 TYTQVMVVNVRPESYAYAWRVADVLRSWGFSVRVDLNRSGQDEQRRRALKLGVPVVAFVG 396

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            +E +  S+ +          V L +A   L +
Sbjct: 397 PQEEASGSVTLYSPSKGERLTVRLEEARQALER 429


>gi|292670903|ref|ZP_06604329.1| alanine-tRNA ligase [Selenomonas noxia ATCC 43541]
 gi|292647524|gb|EFF65496.1| alanine-tRNA ligase [Selenomonas noxia ATCC 43541]
          Length = 872

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/168 (20%), Positives = 63/168 (37%), Gaps = 15/168 (8%)

Query: 44  NGKVCDLSDPVREG------SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIG 97
           +G V  L+  V EG      S+EI      +  +   H+  H++  A++ +  +     G
Sbjct: 522 DGTVYHLAY-VEEGQIQQGDSVEICLDTKKKLSSARNHTATHLLHAALRRVVGDHVQQAG 580

Query: 98  P-IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEA 156
             +  +   +DF   +P S  +L  IE+ + E I          +  ++A+ L       
Sbjct: 581 SLVTPERLRFDFTNFEPVSEQQLRDIEELVNEEILCSIDLHISMMPIDEAKALGAMALFG 640

Query: 157 YKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVA 204
            K              +       +LC G HV +TGQ+  F  + +  
Sbjct: 641 EKY-------GDVVRVVRVPDFSIELCGGSHVTNTGQIGLFKIVSESG 681


>gi|255066517|ref|ZP_05318372.1| serine--tRNA ligase [Neisseria sicca ATCC 29256]
 gi|255049101|gb|EET44565.1| serine--tRNA ligase [Neisseria sicca ATCC 29256]
          Length = 431

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/222 (17%), Positives = 76/222 (34%), Gaps = 14/222 (6%)

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHR-KG--WKIFQTLISYMRRK--IKDDYEEINT 296
           E +DH  L   + L            +   KG   ++ + L  +M     +K  Y E  T
Sbjct: 137 EIKDHVDLGEPLGLDFEGGAKLSGARFTVMKGQIARLHRALAQFMLDTHTLKHGYTEHYT 196

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P ++D    Q +G    +  ++F V    D  K  +     P             + +  
Sbjct: 197 PYIVDDTTLQGTGQLPKFAEDLFHVTRGGDESKKTQYLI--PTAEVTLTNTVADSILAEG 254

Query: 357 ELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           +LP++L      +R+E       + GL+R   F + +       E+ +    ++     +
Sbjct: 255 DLPLKLTAHSPCFRSEAGAYGKDVRGLIRQHQFDKVEMVQIVHPEKSYEALEEMVGHAEN 314

Query: 414 IYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
           I K       ++ L T              +W  A+N  + +
Sbjct: 315 ILKALELPYRVITLCTGDMGFGATKTYDLEVWVPAQNTYREI 356


>gi|207092594|ref|ZP_03240381.1| prolyl-tRNA synthetase [Helicobacter pylori HPKX_438_AG0C1]
          Length = 372

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/154 (11%), Positives = 47/154 (30%), Gaps = 8/154 (5%)

Query: 487 IGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN 545
             +  + G I  +         A +++ +  K     +     G       I+ +     
Sbjct: 205 YHKSLEVGHIFKLGQGYAKSLKASFLDKNG-KERFFEMGCYGIGISRLLSAILEQKSDDL 263

Query: 546 LPLWL---SPIQAIVTTIT---SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
             +W    +P   ++        +  + A E+   L    +    D R+     K+R+  
Sbjct: 264 GCVWTKNTAPFDVVIVVSNWKDEAQKKLAFEVYERLLQKGVDALLDDRDARFGAKMRDFE 323

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
           +    + +I G +    +     +  +   Q + 
Sbjct: 324 LIGERLALIVGKQTLESKEFECIKRANLEKQTLK 357


>gi|217316837|gb|ACK37824.1| putative glutamyl-prolyl tRNA synthetase [Crangon crangon]
          Length = 134

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/133 (24%), Positives = 47/133 (35%), Gaps = 18/133 (13%)

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           G  Y    E     A GR  Q  T   +  N    F+  +     E       ++  +G 
Sbjct: 1   GGDYTTTVE-AFISASGRAIQGATSHHLGQNFSKMFDIVF--EDPETKQKQYCYQNSWGL 57

Query: 531 IERFIGIMIENFKGNLPLWLSP----IQAIVTTIT--------SSAVEY--AQEIANLLK 576
             R IG+M+     N  L L P    IQA+V  +              Y    ++A  LK
Sbjct: 58  TTRTIGVMVMVHGDNKGLVLPPRVATIQAVVLPVGLTVKSTDDEKTNIYNACSKLAEELK 117

Query: 577 SHHLSIETDFRNE 589
           SH + +  D R+ 
Sbjct: 118 SHGIRVRCDVRDN 130


>gi|238018985|ref|ZP_04599411.1| hypothetical protein VEIDISOL_00847 [Veillonella dispar ATCC 17748]
 gi|237864469|gb|EEP65759.1| hypothetical protein VEIDISOL_00847 [Veillonella dispar ATCC 17748]
          Length = 871

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/160 (20%), Positives = 62/160 (38%), Gaps = 11/160 (6%)

Query: 45  GKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIED 102
           G V + S  + EG  + +    + R+     H+  H++  A++ +  E     G  +  D
Sbjct: 527 GTVVEGS--ISEGDDVTLEVDTNRRAAMARNHTATHLLHAALKKVLGEHVNQAGSLVTPD 584

Query: 103 GFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL 162
              +DF    P + +EL QIE  + E I + +      +S ++A+          K   +
Sbjct: 585 YLRFDFTHFSPVTQEELDQIEALVNEEILKATDLAIAEMSMDEAKAKGAMALFGDKYGDV 644

Query: 163 ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMK 202
             +           G   +LC G HV +T  +  F    +
Sbjct: 645 VRVVEVP-------GFSVELCGGSHVGNTAFISSFRLTSE 677


>gi|194036543|ref|XP_001925705.1| PREDICTED: seryl-tRNA synthetase, cytoplasmic [Sus scrofa]
          Length = 514

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 57/165 (34%), Gaps = 11/165 (6%)

Query: 271 KGWKIF--QTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
           KG  +F  Q LI Y +R      Y  I TP  + + + Q+      +   ++ V      
Sbjct: 197 KGVLVFLEQALIQYALRTLGSRGYTPIYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGSE 256

Query: 328 IKDLRTFALKP---MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLM 381
             D  ++  K     +     A+         +LP++ A   + +R E         G+ 
Sbjct: 257 KSDDNSYEEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGRDTRGIF 316

Query: 382 RVRGFTQDDAHVFCTKEQ--MFNECLKIHNLIISIYKDFGFEKIM 424
           RV  F + +  V+ +      +    ++       Y+  G    +
Sbjct: 317 RVHQFEKIEQFVYSSPHDNKSWKMLREMIETAEEFYQSLGIPYHI 361


>gi|229586565|ref|YP_002845066.1| histidyl-tRNA synthetase [Rickettsia africae ESF-5]
 gi|259511956|sp|C3PN13|SYH_RICAE RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|228021615|gb|ACP53323.1| Histidyl-tRNA synthetase [Rickettsia africae ESF-5]
          Length = 414

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 71/426 (16%), Positives = 148/426 (34%), Gaps = 77/426 (18%)

Query: 269 HRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
               +K+   +I+  R   +   Y++++TP V    ++ +S       +++ + +     
Sbjct: 15  LPDDYKVHDYIINKARDVGVLYGYKQMSTPLVEYTKVFNRS---MGESSDVISKEIYSFL 71

Query: 328 IKDLRTFALKP--MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRG 385
            K     AL+P    C     + N   +   +LP++    G V+R +   +     R R 
Sbjct: 72  DKSNDFVALRPEFTACIIRSLISN---RLQHKLPLKFFSTGPVFRYDRPQA----GRQRQ 124

Query: 386 FTQDD-AHVFCTKEQMFNECLKIHNLIISIYKD----------FGFEKIMVKLSTRPEKR 434
           F Q +  ++         + LK+   I+   +            G  +       +  + 
Sbjct: 125 FHQLNYEYIGAKGAITDADTLKLAVDILKALEIEQDTTLELNSLGCNESRSVYQQKLVEY 184

Query: 435 VGS--DALWDDAENIMKG----VLDTIKNSSQD-----RINTGVLLGEGAFY-------- 475
           +    D L ++++  +      +LD+   + Q       + +     E   Y        
Sbjct: 185 LNDFKDQLSEESKIRLSKNPMRILDSKSETDQKIIANAPVLSEYYTDESKEYFEELIQYL 244

Query: 476 ---GPKFEYILKDAIGRDWQCGTI----------QVDFNLPSRFNAFYVNSHSEKCHPVM 522
              G K+    +   G D+ C T           Q       R++       +    P +
Sbjct: 245 DILGMKYSINPRLVRGLDYYCHTAFEFTTKKLGSQSTILAGGRYDGLAKIMGNNDDVPAI 304

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSI 582
                   IER I +M E     +          V  I  + + YA EI + L++ +++I
Sbjct: 305 ---GFAAGIER-IALMREYNISEVKP------VFVLPIGKNNICYALEIVDKLRTENIAI 354

Query: 583 ETDFRNETINYKIREHSIKKI-----PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
                 E++  KI +  +++I       II  GD+E +  ++ I+         V    A
Sbjct: 355 II----ESLG-KIAK-RMQRIFNENAQFIIFIGDEEQANNNLKIKDLKKAEEYIVDFAKA 408

Query: 638 IPILTK 643
           + +L K
Sbjct: 409 LELLKK 414


>gi|24374822|ref|NP_718865.1| histidyl-tRNA synthetase [Shewanella oneidensis MR-1]
 gi|32130107|sp|Q8EC33|SYH_SHEON RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|24349508|gb|AAN56309.1|AE015769_5 histidyl-tRNA synthetase [Shewanella oneidensis MR-1]
          Length = 425

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 60/439 (13%), Positives = 144/439 (32%), Gaps = 92/439 (20%)

Query: 269 HRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
                 ++Q + + +R  +    Y EI TP V +  L+++S    +           D  
Sbjct: 15  LPTQSPLWQKVEAVLRSSVAAYGYSEIRTPIVENTDLFKRSIGEVTDIVEKEMYTFED-- 72

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
            ++  +  L+P      V   N     Y +   RL   G ++R+E         R R F 
Sbjct: 73  -RNGDSLTLRPEGTASTVRAGNEHGLLYNQ-EQRLWYMGPMFRHERPQK----GRYRQFH 126

Query: 388 QD--DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI---------------MVKLSTR 430
           Q   + +   + +       ++  L   +++  G  +                  + +  
Sbjct: 127 QFGVEIYGIGSADIDA----EVLMLSARLWEKLGITEHVTLELNTLGDPAERAAYREALI 182

Query: 431 PEKRVGSDALWDDAE----------------------------------------NIMKG 450
                  D L +D++                                          ++ 
Sbjct: 183 AFLEQHKDKLDEDSQRRMYSNPLRVLDSKDPQVQSILADAPALMDYLGEESSQHFAQLRE 242

Query: 451 VLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFY 510
           +LD +    Q R+N+ ++ G   +    FE+ + +++G        Q       R++   
Sbjct: 243 LLDAVGI--QYRVNSRLVRGLDYYNRTVFEW-VTNSLG-------SQGTVLAGGRYDGLV 292

Query: 511 VNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQE 570
                ++   V     +    ER + +++E       +  + +   V  +  + +  A +
Sbjct: 293 AQLGGKETPAVGFAMGL----ERIV-LLLETLALTQDI-PAEVDVYVAAMGDNCLVEAIK 346

Query: 571 IANLLKSH--HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRR-FGST 627
           +A  L+S    L + +      +  +++        + ++ G++E +E  + ++      
Sbjct: 347 VAQELRSALPTLRVMSHCGGGNLKKQMKRADKSGAQVALLIGEEELAEGVVTVKYLRNDN 406

Query: 628 TTQKV---SLLDAIPILTK 643
             Q+V   +L   +  LTK
Sbjct: 407 EQQRVARNALSAFLAELTK 425


>gi|71899891|ref|ZP_00682039.1| Seryl-tRNA synthetase, class IIa [Xylella fastidiosa Ann-1]
 gi|71730331|gb|EAO32414.1| Seryl-tRNA synthetase, class IIa [Xylella fastidiosa Ann-1]
          Length = 426

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/188 (13%), Positives = 67/188 (35%), Gaps = 15/188 (7%)

Query: 273 WKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L   M      +  YEE+N P +++      +G    +  +MF+ +  +     
Sbjct: 171 ARLHRALAQCMLDLHVSQHGYEEVNVPIIVNADSLHGTGQLPKFEEDMFSTQLGEH---- 226

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
            R + +   +      +  + +     LP+R+      +R+E         G++R   F 
Sbjct: 227 -RRYLIS-TSEISLTNLVRNEIIEADRLPLRMVAHSLCFRSEAGSGGRDTRGMIRQHQFE 284

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALWDD 443
           + +    C  ++   E  ++     ++ +  G     + L T              +W  
Sbjct: 285 KVELVSVCKPQESEGEHHRMTRCAETVLEMLGLPYRKILLCTGDMGFAATKTYDLEVWLP 344

Query: 444 AENIMKGV 451
           ++ + + +
Sbjct: 345 SQGMYREI 352


>gi|313668028|ref|YP_004048312.1| alanyl-tRNA synthetase [Neisseria lactamica ST-640]
 gi|313005490|emb|CBN86926.1| alanyl-tRNA synthetase [Neisseria lactamica 020-06]
          Length = 874

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 61/143 (42%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFS 115
            S+     ++ R+  +  HS  H+M +A++ +  E     G  +  +   +D    Q  +
Sbjct: 544 DSVTAKVDDEIRNANMRNHSATHLMHKALRDVLGEHVEQKGSLVTAESTRFDISHPQAVT 603

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           ++E+ ++E+++ E +  +       +S E A++         K          + V + +
Sbjct: 604 AEEITEVERRVNEAVLANVAVNAAIMSMEDAQKTGAMMLFGEKY--------GDEVRVLQ 655

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G +  +LC G HV  TG +  F
Sbjct: 656 MGGFSTELCGGTHVSRTGDIGLF 678


>gi|269960798|ref|ZP_06175169.1| seryl-tRNA synthetase [Vibrio harveyi 1DA3]
 gi|269834462|gb|EEZ88550.1| seryl-tRNA synthetase [Vibrio harveyi 1DA3]
          Length = 435

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/248 (15%), Positives = 84/248 (33%), Gaps = 16/248 (6%)

Query: 220 IYGTAWNTQQELTQYLY-FLEESEKRDHRKLAREMD--LFHIAEDGSGVIFWHRKG--WK 274
             G   N   E++++      + E +DH  L    D   F  A   +G  F   KG   +
Sbjct: 114 PDGKDENDNVEISRWGEPKSYDFELKDHVDLGEMGDGLDFASAVKITGARFIVMKGQFAR 173

Query: 275 IFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL- 331
           + + +  +M     +   Y E+  P +++      +G    +  ++F  +   + + D  
Sbjct: 174 LHRAIAQFMLDLHTEEHGYTEMYVPYLVNSDSLFGTGQLPKFGKDLFHTEPLVEKVNDEE 233

Query: 332 -RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
            R  +L P        +    +    +LP+++      +R+E         GL+R+  F 
Sbjct: 234 PRKLSLIPTAEVPVTNLVRDTISDEADLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFD 293

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E   N   ++      + +        V L T              +W  
Sbjct: 294 KVELVQITKPEDSMNALEELTGHAEKVLQLLELPYRKVVLCTGDMGFGARKTYDLEVWVP 353

Query: 444 AENIMKGV 451
           A+   + +
Sbjct: 354 AQETYREI 361


>gi|229019610|ref|ZP_04176423.1| Alanyl-tRNA synthetase [Bacillus cereus AH1273]
 gi|229025848|ref|ZP_04182246.1| Alanyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228735459|gb|EEL86056.1| Alanyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228741690|gb|EEL91877.1| Alanyl-tRNA synthetase [Bacillus cereus AH1273]
          Length = 880

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/161 (19%), Positives = 65/161 (40%), Gaps = 15/161 (9%)

Query: 44  NGK-----VCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP 98
           NG+     V +     ++ +++ +     RS  V  H+  H++ +A++ +        G 
Sbjct: 531 NGQNLHKVVVEEGTLTKDAAVKAVIDTKNRSSVVKNHTATHLLHQALKDVLGMHVNQAGS 590

Query: 99  -IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAY 157
            +  +   +DF       +DEL +IE+ + E I           + E+A+E+        
Sbjct: 591 LVTSERLRFDFSHFGQVQADELEKIERIVNEKIWESIDVEISQKAIEEAKEMGAMALFGE 650

Query: 158 KVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
           K          + V + + G +  +LC G HV +T  +  F
Sbjct: 651 KY--------GDVVRVVQVGGYSLELCGGCHVDNTASIGIF 683


>gi|169831075|ref|YP_001717057.1| alanyl-tRNA synthetase [Candidatus Desulforudis audaxviator MP104C]
 gi|205830046|sp|B1I370|SYA_DESAP RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|169637919|gb|ACA59425.1| alanyl-tRNA synthetase [Candidatus Desulforudis audaxviator MP104C]
          Length = 880

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 41/200 (20%), Positives = 75/200 (37%), Gaps = 11/200 (5%)

Query: 54  VREGS-IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKE 111
           + EG+ I I+     R      H+  H++   ++++        G  +  +   +DF   
Sbjct: 541 LEEGARIRILVDGSRRRKICRNHTATHLLHRTLKAVLGTHVNQAGSLVAPERLRFDFTHI 600

Query: 112 QPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENV 171
           QP S  ELA++E ++ EI+  +        S ++AREL        K   L  +   + V
Sbjct: 601 QPLSEAELAEVESRINEIVLSNLRVESFQTSFDRARELGAVALFGEKYGDLVRVVQIDGV 660

Query: 172 TLYRQGEWFDLCRGPHVRSTGQVKKF--FKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQ 229
           ++   G       G HV ST ++          V     R ++   M +  +  + N Q 
Sbjct: 661 SMELCG-------GTHVLSTAEIGPVKITAESSVGAGLRRLEAVTGMEALAFLNSRNEQL 713

Query: 230 ELTQYLYFLEESEKRDHRKL 249
                   +  SE   H + 
Sbjct: 714 HRIAQAVRVPVSELVVHVER 733


>gi|153005174|ref|YP_001379499.1| histidyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
 gi|152028747|gb|ABS26515.1| histidyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
          Length = 415

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 58/414 (14%), Positives = 115/414 (27%), Gaps = 67/414 (16%)

Query: 276 FQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQS--GHWDSYRANMFAVKCADDTIKDLR 332
           +Q + +  R       Y E+ TP V    L+ +      D  +  M+  +   + +    
Sbjct: 22  WQEMEAVAREVFALYGYREVRTPVVEPAQLFARGVGEATDIVKKEMYVFEDKGEEL---- 77

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
             AL+P    G V  F     ++ E P +    G ++R E         R R F Q    
Sbjct: 78  -LALRPEGTAGTVRAF-IEHGAFVEGPQKWFYVGPMFRRERPQK----GRYRQFHQIGCE 131

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFG---------------FEKIMVKLSTRPEKRVGS 437
            F   E   +   +   L+       G                   +  L      R G 
Sbjct: 132 AFGIAEPYLDA--EQIALLDDYLARLGVRAELKLNSVGDRACRPAYLQDLRDFLASRKGE 189

Query: 438 DALWDDAENIMKGVLDTIKNSSQ---------DRINTGVLLG-EGAFYGPK--------- 478
               D  E + +  L  +    +          R+   +       F   K         
Sbjct: 190 LCA-DCNERMERNPLRVLDCKVESCQPVLAQAPRLLERLCPECASHFDAVKGGLDALGVR 248

Query: 479 ----------FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
                      +Y ++ A          Q       R++             +      F
Sbjct: 249 YTVDTRLVRGLDYYVRTAYEFTSDALGSQSAVAGGGRYDGLVETLGGPPTPGI-----GF 303

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRN 588
              +  + +++E   G       P+   V+     A E  +  A  L+   ++ E D R 
Sbjct: 304 ALGQERLAMILE-KAGRAAPERRPVVFFVSADAEGAREALRR-AAELRRAGIACELDARG 361

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             +  + ++         ++ G  E       ++   +     ++L D +  + 
Sbjct: 362 GKLKAQFKQAERVGARYALVLGGNEVQTGQAKLKDLQTREETPIALADLVARVR 415


>gi|205830244|sp|A1RHG5|SYA_SHESW RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|205830245|sp|A4Y931|SYA_SHEPC RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
          Length = 874

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 55/141 (39%), Gaps = 10/141 (7%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSD 117
           +E    +  R    + HS  H++  A++ +        G +++     +DF   +     
Sbjct: 546 VEAKVDKKLRHRTQLNHSVTHLLHAALRQVLGTHVTQKGSLVDPERLRFDFSHFEAVKPA 605

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           EL ++E+ +   I R+       ++ ++A+E         K            V +   G
Sbjct: 606 ELKKVEELVNTQIRRNHELKVAEMAIDEAKEKGAMALFGEKY--------DAQVRVVTMG 657

Query: 178 EW-FDLCRGPHVRSTGQVKKF 197
           ++  +LC G HV  TG +  F
Sbjct: 658 DFSIELCGGTHVGRTGDIGLF 678


>gi|71279113|ref|YP_267790.1| alanyl-tRNA synthetase [Colwellia psychrerythraea 34H]
 gi|83305842|sp|Q487H5|SYA_COLP3 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|71144853|gb|AAZ25326.1| alanyl-tRNA synthetase [Colwellia psychrerythraea 34H]
          Length = 876

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/148 (21%), Positives = 61/148 (41%), Gaps = 17/148 (11%)

Query: 48  CDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPI-IEDGFY 105
             L+  V+ E ++E       R+  V  H+  H++ EA++ +  E     G +   D   
Sbjct: 542 VGLNRRVKAEINVE------RRAAIVKNHTATHLLHEALRKVLGEHVTQKGSLCDSDKLR 595

Query: 106 YDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESI 165
           +DF   +  ++ EL  +E+ +   I R+     + +  E+A+          K       
Sbjct: 596 FDFSHFEGVTAQELHDVEQMVNNEIRRNHAKQTESMYIEEAKAKGAMALFGEKY------ 649

Query: 166 PAKENVTLYRQGEW-FDLCRGPHVRSTG 192
              + V +   G++  +LC G HV  TG
Sbjct: 650 --DDEVRVVTLGDFSIELCGGVHVNRTG 675


>gi|120598090|ref|YP_962664.1| alanyl-tRNA synthetase [Shewanella sp. W3-18-1]
 gi|146293839|ref|YP_001184263.1| alanyl-tRNA synthetase [Shewanella putrefaciens CN-32]
 gi|120558183|gb|ABM24110.1| alanyl-tRNA synthetase [Shewanella sp. W3-18-1]
 gi|145565529|gb|ABP76464.1| alanyl-tRNA synthetase [Shewanella putrefaciens CN-32]
          Length = 892

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 55/141 (39%), Gaps = 10/141 (7%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSD 117
           +E    +  R    + HS  H++  A++ +        G +++     +DF   +     
Sbjct: 564 VEAKVDKKLRHRTQLNHSVTHLLHAALRQVLGTHVTQKGSLVDPERLRFDFSHFEAVKPA 623

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           EL ++E+ +   I R+       ++ ++A+E         K            V +   G
Sbjct: 624 ELKKVEELVNTQIRRNHELKVAEMAIDEAKEKGAMALFGEKY--------DAQVRVVTMG 675

Query: 178 EW-FDLCRGPHVRSTGQVKKF 197
           ++  +LC G HV  TG +  F
Sbjct: 676 DFSIELCGGTHVGRTGDIGLF 696


>gi|238789329|ref|ZP_04633116.1| Seryl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
 gi|238722661|gb|EEQ14314.1| Seryl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
          Length = 430

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 61/188 (32%), Gaps = 10/188 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M     +   Y E   P +++      +G    +  ++F  K  ++   D
Sbjct: 170 ARMHRALAQFMLDLHTEKHGYLETYVPYLVNHATLYGTGQLPKFGGDLFHTKPLEEE-SD 228

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
              +AL P        +    +     LP+++      +R+E         GL+R+  F 
Sbjct: 229 SSNYALIPTAEVPVTNLVRDEILEEESLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFD 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E       ++      + +        V L T              +W  
Sbjct: 289 KVEMVQITRPEDSMAALEELTGHAEKVLQLLELPYRKVLLCTGDMGFGSSKTYDLEVWLP 348

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 349 AQNTYREI 356


>gi|254673270|emb|CBA08330.1| Alanyl-tRNA synthetase [Neisseria meningitidis alpha275]
          Length = 885

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 61/143 (42%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFS 115
            S+     ++ R+  +  HS  H+M +A++ +        G  +  +   +D    Q  +
Sbjct: 555 DSVTAKVDDEIRNANMRNHSATHLMHKALRDVLGRHVEQKGSLVTAESTRFDISHPQAVT 614

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           ++E+A++E+++ E +  +       +S E A++         K          + V + +
Sbjct: 615 AEEIAEVERRVNEAVLANVAVNAAIMSMEDAQKTGAMMLFGEKY--------GDEVRVLQ 666

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G +  +LC G HV  TG +  F
Sbjct: 667 MGGFSTELCGGTHVSRTGDIGLF 689


>gi|223933432|ref|ZP_03625418.1| histidyl-tRNA synthetase [Streptococcus suis 89/1591]
 gi|223897926|gb|EEF64301.1| histidyl-tRNA synthetase [Streptococcus suis 89/1591]
          Length = 427

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 62/421 (14%), Positives = 132/421 (31%), Gaps = 70/421 (16%)

Query: 276 FQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           +Q + ++ R    + +Y EI TP       ++          ++   +  D   K  R  
Sbjct: 20  WQYVENFTRSIFKQYNYAEIRTPIF---EHYEVISRSVGDTTDIVTKEMYDFYDKGERHI 76

Query: 335 ALKPMNCPGHVAVFNHGLKS-----YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
            L+P    G   V    +++       + P +    G ++R E   +     R+R F Q 
Sbjct: 77  TLRP---EGTAPVVRSYVENKLFAPEVQKPAKFYYMGPMFRYERPQA----GRLRQFHQI 129

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK------LSTRPEKRVG------- 436
               F +        ++   +    +++ G + I +         +R   R         
Sbjct: 130 GVECFGSNNPA--TDVETIAMAYHFFEELGIKDIRLHLNSLGNPESRAAYRQALIDYLTP 187

Query: 437 -SDALWDDAENIMKG----VLDTIKNSSQDR-------INTGVLLGEGAFYGPKFEYILK 484
             D L  D++  ++     VLD+ +   +         ++         F   K    + 
Sbjct: 188 LKDQLSKDSQRRLEENPLRVLDSKEKEDKIAVENAPSILDYLDEESTAHFEAVK---TML 244

Query: 485 DAIGRDWQCGTIQVDFNLPSRFNAFYVNSH------------------SEKCHPVMIHRA 526
           D++G  +   T  V          F   +                   +    P      
Sbjct: 245 DSLGIAYVIDTNMVRGLDYYNHTIFEFMTEVGGNDLTICAGGRYDGLVTYFGGPETPAFG 304

Query: 527 VFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF 586
               IER I +++E     LPL  + +   +  +   A   A ++   ++      E D+
Sbjct: 305 FGMGIERLI-LVLEKQGIELPL-DTQLDIYIAVLGQEANGGALDLVQAIRKQGFRAERDY 362

Query: 587 RNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL----DAIPILT 642
            +  +  + +   +     II  G  E     + ++   + +  + SL     D   IL 
Sbjct: 363 LDRKLKAQFKSADVFGAKAIITLGGSEIESGQVVVKNNQTRSQVETSLEALKTDFASILE 422

Query: 643 K 643
           +
Sbjct: 423 E 423


>gi|291545954|emb|CBL19062.1| alanyl-tRNA synthetase [Ruminococcus sp. SR1/5]
          Length = 880

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/149 (18%), Positives = 60/149 (40%), Gaps = 10/149 (6%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSS 116
           ++ +   E+ R      HS  H++ +A++++        G  +  D   +DF   Q  ++
Sbjct: 549 TVSLKVNEEARKDTEKNHSATHLLQKALKTVLGSHVEQKGSLVTPDRLRFDFAHFQAMTA 608

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
           +EL   E+ + + I          +  E+A++         K          + V +   
Sbjct: 609 EELQATEELVNKEIQAGLDVHTDVMDVEEAKKSGAMALFGEKY--------DQKVRVVSM 660

Query: 177 GEW-FDLCRGPHVRSTGQVKKFFKLMKVA 204
           G++  +LC G HV++T  +  F  + +  
Sbjct: 661 GDFSKELCGGTHVKNTSSIMLFKIVSESG 689


>gi|307729250|ref|YP_003906474.1| histidyl-tRNA synthetase [Burkholderia sp. CCGE1003]
 gi|307583785|gb|ADN57183.1| histidyl-tRNA synthetase [Burkholderia sp. CCGE1003]
          Length = 446

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 63/414 (15%), Positives = 120/414 (28%), Gaps = 79/414 (19%)

Query: 289 DDYEEINTPQVLDQHLWQ--QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA 346
             Y+ I TP V    L+        D     M++   A +         L+P N    V 
Sbjct: 42  YGYQNIRTPIVEHTQLFTRGIGEVTDIVEKEMYSFTDALN----GENLTLRPEN-TAAVV 96

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD--DAHVFCTKEQMFNEC 404
                     + P RL   G ++R+E         R R F Q   +A  F   +      
Sbjct: 97  RAAIEHNMLYDGPKRLWYIGPMFRHERPQR----GRYRQFHQVGVEALGFAGPDADA--- 149

Query: 405 LKIHNLIISIYKDFG--------------FEKIMVKLSTRPEKRVGSDALWDDAENIM-- 448
            +I  +   ++ D G               E+   ++          D L +DA+  +  
Sbjct: 150 -EIIMMCQRLWDDLGLTGIKLEINSLGLAQERAAHRVELIAYLEKHMDVLDEDAKRRLYT 208

Query: 449 ---------KGVLDTIKNSSQDRINTGVLLGEGAFYGP-------KFEYILKDAIGRDWQ 492
                       L  +  ++   I+         F G           + +   + R   
Sbjct: 209 NPLRVLDTKNPALQEVAQNAPKLIDFLGEESRAHFEGLQRILKANNIPFTINPRLVRGLD 268

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS--------IERFIGIMIENFKG 544
              + V   +  +  A    +   +  P++       +        IER + ++ E    
Sbjct: 269 YYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQLGGKATAACGWAMGIERILELLKEEQ-- 326

Query: 545 NLPLWLSPIQ----AIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE--TINYK--IR 596
                L P        V     +A E A  IA  L+   L +      +  + ++K  ++
Sbjct: 327 -----LVPEDEGCDVYVVHQGDAAREQAFIIAERLRDTGLDVILHCSADGQSASFKSQMK 381

Query: 597 EHSIKKIPIIIICGDKEASERSIGIR-------RFGSTTTQKVSLLDAIPILTK 643
                     ++ G+ E +  ++G++         G      V   D    L  
Sbjct: 382 RADASGAAFAVVLGEDEIANGTVGVKPLRDTNANGGKNEQHNVPAEDLTEFLIN 435


>gi|269122820|ref|YP_003305397.1| seryl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
 gi|268314146|gb|ACZ00520.1| seryl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
          Length = 422

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/244 (15%), Positives = 84/244 (34%), Gaps = 22/244 (9%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIF 276
           G + +   E+ ++    E + E + H +L   +D+          GS    +   G ++ 
Sbjct: 114 GESEDDNVEIRRWGKPTEFNFEVKSHDELGVNLDILDFERGAKLSGSRFTVYKGMGARLE 173

Query: 277 QTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           + LI++M     +   + EI TPQ+  + +   +G    +  +M+ ++            
Sbjct: 174 RALINFMLDVHTEEHGFTEILTPQLAKKDIMIGTGQLPKFEEDMYKIQ--------GEDL 225

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDA 391
            L P        ++   +    ELP     F + +R E       L GL+R   F + + 
Sbjct: 226 YLIPTAEVTLTNMYAGEILKEEELPKHFCGFTACFRQEAGSGGRDLKGLIRQHQFNKVEM 285

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKI----MVKLSTRPEKRVGSDALWDDAENI 447
                 ++ + E   + N    I +                     +     +W  ++N 
Sbjct: 286 VKIVHPDKSYEELEHMTNCGEKILQKLNLPYRVLSLCTGDMGFSAAKTYDIEVWVPSQNK 345

Query: 448 MKGV 451
            + +
Sbjct: 346 YREI 349


>gi|332884348|gb|EGK04616.1| seryl-tRNA synthetase [Dysgonomonas mossii DSM 22836]
          Length = 423

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 68/198 (34%), Gaps = 16/198 (8%)

Query: 245 DHRKLAREMDLFHIA----EDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQV 299
            H  LA++ DL          G+G   +  KG ++ + LI+Y   K ++  Y E+  P V
Sbjct: 142 PHWDLAKKYDLIDFELGVKITGAGFPVYKGKGARLQRALINYFLDKARESGYLEVQPPYV 201

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           ++            Y       K        L    L P        ++   +   ++LP
Sbjct: 202 VNA--------ASGYGTGQLPDKEGQMYHATLDDLYLIPTAEVPVTNIYRDVILEEKDLP 253

Query: 360 VRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +    + + +R E       + GL R+  F + +       E  +    ++   + S+  
Sbjct: 254 IMNTAYSACFRREAGSYGKDVRGLNRLHQFDKVEIVRIDKPEHSYESLKEMVAHVQSLVD 313

Query: 417 DFGFEKIMVKLSTRPEKR 434
           +      +++L       
Sbjct: 314 ELELPWRILRLCGGDMSF 331


>gi|320530062|ref|ZP_08031132.1| seryl-tRNA synthetase [Selenomonas artemidis F0399]
 gi|320137495|gb|EFW29407.1| seryl-tRNA synthetase [Selenomonas artemidis F0399]
          Length = 437

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 69/196 (35%), Gaps = 17/196 (8%)

Query: 265 VIFWHRKGWKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK 322
             F+   G ++ +  I++M     +   Y E+  P ++++     +G    +  +MF ++
Sbjct: 176 FTFYKGLGARLERACINFMMDLHAEKHGYTEMLAPYIVNESSMVGTGQLPKFAEDMFKLE 235

Query: 323 CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHG 379
             D        + L P             +    +LP     + + +R E   +     G
Sbjct: 236 GLD--------YYLVPTAEVPTTNYHRDEILDAAQLPEYYTSYTACFRAEAGSAGRDTRG 287

Query: 380 LMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----V 435
           L+R   F + +   F T E  ++E   +      + +       +++L T          
Sbjct: 288 LIRQHQFNKVELIKFVTPETSWDELESMVEAAEDVLRTLELPYRVIQLCTGDMSFTSAKT 347

Query: 436 GSDALWDDAENIMKGV 451
               +W  A+N  + +
Sbjct: 348 YDLEVWMPAQNKYREI 363


>gi|308389806|gb|ADO32126.1| seryl-tRNA synthetase [Neisseria meningitidis alpha710]
          Length = 431

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 64/188 (34%), Gaps = 11/188 (5%)

Query: 273 WKIFQTLISYMRRK--IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M     ++  Y E  TP ++D    Q +G    +  ++F V    D  K 
Sbjct: 171 ARLHRALAQFMLDTHTLQHGYTEHYTPYIVDDTTLQGTGQLPKFAEDLFHVTRGGDETKT 230

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
            +     P             +    +LP++L      +R+E         GL+R   F 
Sbjct: 231 TQYLI--PTAEVTLTNTVADSIIPSEQLPLKLTAHSPCFRSEAGSYGKDTRGLIRQHQFD 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E+ +    ++     +I K       ++ L T              +W  
Sbjct: 289 KVEMVQIVHPEKSYETLEEMVGHAENILKALELPYRVITLCTGDMGFGAAKTYDLEVWVP 348

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 349 AQNTYREI 356


>gi|256839200|ref|ZP_05544710.1| histidyl-tRNA synthetase [Parabacteroides sp. D13]
 gi|256740119|gb|EEU53443.1| histidyl-tRNA synthetase [Parabacteroides sp. D13]
          Length = 451

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 15/92 (16%), Positives = 33/92 (35%)

Query: 550 LSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIIC 609
           L   Q +          Y   +   ++   +  E    +  +  ++     KKIP + I 
Sbjct: 360 LKTTQLLFVNFGQKEEIYLLPLIAKVRKAGIRTELYPESTKMKKQMGYADAKKIPFVAIV 419

Query: 610 GDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           G+ E +E  I ++   +     V++ + I   
Sbjct: 420 GENEMAENKINLKNMLTGEQTLVTIEELIERF 451


>gi|255527097|ref|ZP_05393985.1| seryl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|296187885|ref|ZP_06856278.1| seryl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|255509199|gb|EET85551.1| seryl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|296047506|gb|EFG86947.1| seryl-tRNA synthetase [Clostridium carboxidivorans P7]
          Length = 426

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 50/350 (14%), Positives = 117/350 (33%), Gaps = 36/350 (10%)

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYK-----VEILESIPAKENVT 172
           +L +I K  +E I +     +     E   +      E  +     VE+L++   ++++ 
Sbjct: 3   DLKRIRKN-KEEIKKALK-NRGEHFEETIIDEVLDLDEKRRRILIEVEVLKNKKNQDSIQ 60

Query: 173 LYRQ------GEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRI-YGTAW 225
           + +        ++             Q       +     Y            +  G   
Sbjct: 61  IGKLKKEGKSSDFIVSEIKNLTDKIKQFDIELSEVDNKIQYIMLRIPNIPHISVPEGETD 120

Query: 226 NTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLI 280
           +   E+ ++    +     + H  +  ++++          GS   F+   G ++ + +I
Sbjct: 121 SDNVEIRRWSKPTKFEFTPKAHWDIGADLNILDFERGGKVAGSRFTFYRGLGARLERAVI 180

Query: 281 SYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKP 338
           +Y      +   YEE+  P +++      +G    +  + F +  +D          L P
Sbjct: 181 TYFLDVHTEKHGYEELFPPYMVNSSSMVGTGQLPKFEEDTFRISNSD--------LFLIP 232

Query: 339 MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFC 395
                    +   +    +LP++   + + +R+E S +     GL+R R F + +   F 
Sbjct: 233 TAEVPVTNFYRDEVLKGEDLPIKHVAYSACFRSESSSAGRDTRGLVRQRQFNKVELVKFT 292

Query: 396 TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALW 441
             EQ ++E  K+ N    I +       +VK+                +W
Sbjct: 293 KPEQSYDELEKLTNDAEEILQGLCLPYRVVKICKGDLGFTAALKYDIEVW 342


>gi|205830247|sp|A1S4E9|SYA_SHEAM RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
          Length = 873

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 54/143 (37%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFS 115
            S++ +  +  R    + HS  H++  A++ +        G +++     +DF   +   
Sbjct: 544 DSLKAMVDKKLRHRTELNHSVTHLLHAALRQVLGTHVTQKGSLVDPERLRFDFSHFEGVK 603

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            +EL  +E  +   I R+       +  E+A+          K            V +  
Sbjct: 604 REELKAVEDLVNTQIRRNHELNFAEMDIEEAKAKGAMALFGEKY--------DSKVRVVT 655

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G++  +LC G HV  TG +  F
Sbjct: 656 MGDFSIELCGGTHVGRTGDIGLF 678


>gi|149420962|ref|XP_001510792.1| PREDICTED: similar to Solute carrier organic anion transporter
           family, member 4A1, partial [Ornithorhynchus anatinus]
          Length = 468

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 57/165 (34%), Gaps = 11/165 (6%)

Query: 271 KGWKIF--QTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
           KG  +F  Q LI Y +R      Y  I TP  + + + Q+      +   ++ V      
Sbjct: 151 KGVLVFLEQALIQYALRTLGSRGYTPIYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGSE 210

Query: 328 IKDLRTFALKP---MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLM 381
             D  ++  K     +     A+         +LP++ A   + +R E         G+ 
Sbjct: 211 KADDNSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGRDTRGIF 270

Query: 382 RVRGFTQDDAHVFCTKEQ--MFNECLKIHNLIISIYKDFGFEKIM 424
           RV  F + +  V+ +      +    ++       Y+  G    +
Sbjct: 271 RVHQFEKIEQFVYSSPHDNKSWEMFDEMIGTAEEFYQALGIPYHI 315


>gi|119774185|ref|YP_926925.1| alanyl-tRNA synthetase [Shewanella amazonensis SB2B]
 gi|119766685|gb|ABL99255.1| alanyl-tRNA synthetase [Shewanella amazonensis SB2B]
          Length = 900

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 54/143 (37%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFS 115
            S++ +  +  R    + HS  H++  A++ +        G +++     +DF   +   
Sbjct: 571 DSLKAMVDKKLRHRTELNHSVTHLLHAALRQVLGTHVTQKGSLVDPERLRFDFSHFEGVK 630

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            +EL  +E  +   I R+       +  E+A+          K            V +  
Sbjct: 631 REELKAVEDLVNTQIRRNHELNFAEMDIEEAKAKGAMALFGEKY--------DSKVRVVT 682

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G++  +LC G HV  TG +  F
Sbjct: 683 MGDFSIELCGGTHVGRTGDIGLF 705


>gi|190574115|ref|YP_001971960.1| histidyl-tRNA synthetase [Stenotrophomonas maltophilia K279a]
 gi|229558745|sp|B2FPL6|SYH_STRMK RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|190012037|emb|CAQ45659.1| putative histidyl-tRNA synthetase [Stenotrophomonas maltophilia
           K279a]
          Length = 464

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 75/214 (35%), Gaps = 19/214 (8%)

Query: 436 GSDALWDDAENIMKGVLDTIKNSSQDR----INTGVLLGEGAFYGPKFEYILKDAIGRDW 491
           GS  +       ++ VL  ++          +N  +  G   + G  +E  L D      
Sbjct: 258 GSSEILRTGVAELREVLQLVQALGVPETAYCLNFSIARGLDYYTGTVYETTLTDHP---- 313

Query: 492 QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFI-GIMIENFKGNLPLWL 550
           Q G+I        R+     +    K   V I   +     +     +I+  +G      
Sbjct: 314 QIGSICSGG----RYEDLASHYSKSKLPGVGISIGLSRLFWQLREAGLIDGIEG------ 363

Query: 551 SPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           S +QA+V  +    +  + +IA  L++  ++ E     + I  + +  +   I  +++ G
Sbjct: 364 SSVQALVALMDEQGMPQSLDIARRLRAGGINTEVQMEPKKIGKQFQYAAKAGIRFVVLAG 423

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           + E +   + ++        +VS       L  E
Sbjct: 424 EDELARGVVAVKDLLREQQFEVSRDGLASTLQVE 457



 Score = 38.2 bits (87), Expect = 4.0,   Method: Composition-based stats.
 Identities = 39/217 (17%), Positives = 74/217 (34%), Gaps = 20/217 (9%)

Query: 269 HRKGWKIFQTLISYMRRKIKD-DYEEINTPQ------VLDQHLWQQSGHWDSYRANMFAV 321
             +    FQ ++  +RR  +   +  + TP       +L +   +        ++     
Sbjct: 14  LPREQIAFQRMLDVIRRNYERFGFLPVETPVFELSDVLLTKSGGETERQVYFVQSTGALA 73

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL--PVRLAEFGSVYRNEPSGSLHG 379
             A+   + L   AL+       V +  +  +   EL  P R  +   VYR E +     
Sbjct: 74  NAAESGDRSLPEMALRF---DLTVPLARYVAEHEHELTFPFRRYQMQRVYRGERAQR--- 127

Query: 380 LMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDA 439
             R R F Q D  V            ++  +I +++ +       ++L+ R   R G   
Sbjct: 128 -GRFREFYQCDIDVIGKDSLSVRYDAEVLAVIHAVFSELRIGDFSIQLNNRKLMR-GFFE 185

Query: 440 LWDDAENIMK-GVLDTIKNSSQDRINT--GVLLGEGA 473
               AE   +  VL  +    +   +     L+GEG 
Sbjct: 186 SLGVAEGERQLAVLREVDKLDKRGADYVRETLVGEGF 222


>gi|168181130|ref|ZP_02615794.1| seryl-tRNA synthetase [Clostridium botulinum NCTC 2916]
 gi|182668022|gb|EDT80001.1| seryl-tRNA synthetase [Clostridium botulinum NCTC 2916]
          Length = 426

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 86/236 (36%), Gaps = 22/236 (9%)

Query: 220 IYGTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWK 274
             G       E+  +L   +   E + H  +   +++          GS   F+   G +
Sbjct: 115 PDGETDEDNIEIRNWLEPTKFDFEPKAHWDIGTNLNILDFERAGKVTGSRFTFYKGLGAR 174

Query: 275 IFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           + + +ISY      +   Y EI  P ++++     +G    +  + F +   D       
Sbjct: 175 LERAVISYFLDTHTEKHGYIEILPPYMVNRTSMIGTGQLPKFEEDAFKISEDD------- 227

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQD 389
            + L P        ++   +    ELP++   + + +R+E   +     GL+R   F + 
Sbjct: 228 -YFLIPTAEVPVTNLYRDEVLKGDELPLKHVAYSACFRSEAGSAGRDTRGLVRQHQFNKV 286

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALW 441
           +   F   EQ ++E  K+ N   ++ K+ G    +V++                +W
Sbjct: 287 ELVKFTKPEQSYDELEKLTNDAETVLKELGIPYRVVRICKGDLGFTAALKYDLEVW 342


>gi|15677532|ref|NP_274688.1| seryl-tRNA synthetase [Neisseria meningitidis MC58]
 gi|30173214|sp|Q9JY95|SYS_NEIMB RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|7226938|gb|AAF42032.1| seryl-tRNA synthetase [Neisseria meningitidis MC58]
 gi|316984831|gb|EFV63788.1| seryl-tRNA synthetase [Neisseria meningitidis H44/76]
 gi|325140853|gb|EGC63363.1| seryl-tRNA synthetase [Neisseria meningitidis CU385]
 gi|325199722|gb|ADY95177.1| seryl-tRNA synthetase [Neisseria meningitidis H44/76]
          Length = 431

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 64/188 (34%), Gaps = 11/188 (5%)

Query: 273 WKIFQTLISYMRRK--IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M     ++  Y E  TP ++D    Q +G    +  ++F V    D  K 
Sbjct: 171 ARLHRALAQFMLDTHTLQHGYTEHYTPYIVDDTTLQGTGQLPKFAEDLFHVTRGGDETKT 230

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
            +     P             +    +LP++L      +R+E         GL+R   F 
Sbjct: 231 TQYLI--PTAEVTLTNTVADSIIPSEQLPLKLTAHSPCFRSEAGSYGKDTRGLIRQHQFD 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E+ +    ++     +I K       ++ L T              +W  
Sbjct: 289 KVEMVQIVHPEKSYETLEEMVGHAENILKALELPYRVITLCTGDMGFGAAKTYDLEVWVP 348

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 349 AQNTYREI 356


>gi|289662416|ref|ZP_06483997.1| seryl-tRNA synthetase [Xanthomonas campestris pv. vasculorum
           NCPPB702]
 gi|289667711|ref|ZP_06488786.1| seryl-tRNA synthetase [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 426

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 64/188 (34%), Gaps = 15/188 (7%)

Query: 273 WKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M      +  YEE N P +++    + +G    +  ++F  +       +
Sbjct: 171 ARLHRALAQFMLDLHVGEHGYEETNVPLLVNADSMRGTGQLPKFEDDLFQTEV-----GE 225

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
            R + + P +      +    +     LP+R+      +R E         G++R   F 
Sbjct: 226 SRRYLI-PTSEVPLTNIVRDEIVDAERLPLRMTAHSMCFRAEAGSGGRDTRGMIRQHQFE 284

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +    C  E    E  ++      + +  G     V L T              +W  
Sbjct: 285 KVELVTACAPEDSDAEHQRMTRCAELVLEQLGLPYRKVLLCTGDMGFSAIKTYDLEVWLP 344

Query: 444 AENIMKGV 451
           ++N  + +
Sbjct: 345 SQNTYREI 352


>gi|261884369|ref|ZP_06008408.1| alanyl-tRNA synthetase [Campylobacter fetus subsp. venerealis str.
           Azul-94]
          Length = 274

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 64/159 (40%), Gaps = 9/159 (5%)

Query: 47  VCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFY 105
           + +    ++ G I +      R      HS  HI+  A++++        G  +E D   
Sbjct: 40  MIEAKTSLKIGDIVLCEVSLNRLEIRRHHSATHILQAALRNVLGAHIAQAGSSVEADKLR 99

Query: 106 YDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESI 165
           +DF   +P + +EL +IE  + E I + +P   + +  + A++         K       
Sbjct: 100 FDFSHPKPVTKEELEKIENFVNEAILKGAPAKIEIMDIQNAKKSGAIALFGEKY------ 153

Query: 166 PAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVA 204
              + V +   G   +LC G HV +  ++  FF + +  
Sbjct: 154 --ADKVRVLTLGPSKELCGGTHVENLNEIGSFFIVRESG 190


>gi|261868430|ref|YP_003256352.1| seryl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D11S-1]
 gi|261413762|gb|ACX83133.1| seryl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D11S-1]
          Length = 438

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 64/190 (33%), Gaps = 11/190 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD--DTI 328
            K+ + +  +M     +   Y E   P +++      +G    +  ++F  K  +  D  
Sbjct: 171 AKLHRAIAQFMLDLHTEQHGYTEAYVPYLVNHDTLYGTGQLPKFGEDLFHTKPLEGQDPN 230

Query: 329 KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRG 385
           +  RT+ L P        +    +     LP+++      +R+E         GL+R+  
Sbjct: 231 EVQRTYGLIPTAEVPVTNLVRGEILDAENLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQ 290

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALW 441
           F + +       E+      ++      + +  G     V L T              +W
Sbjct: 291 FDKVELVQIVEPEKSMEALEELTGHAEKVLQLLGLPYRKVLLCTGDMGFGSCKTYDLEVW 350

Query: 442 DDAENIMKGV 451
             A+N  + +
Sbjct: 351 VPAQNTYREI 360


>gi|251792122|ref|YP_003006842.1| seryl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
 gi|247533509|gb|ACS96755.1| seryl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
          Length = 435

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/190 (14%), Positives = 64/190 (33%), Gaps = 11/190 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD--DTI 328
            ++ + +  +M     +   Y E   P +++      +G    +  ++F  K  +  D  
Sbjct: 171 ARLHRAISQFMLDLHTEQHGYTEAYVPYLVNHDTLYGTGQLPKFGEDLFHTKPLEGQDPN 230

Query: 329 KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRG 385
           +  RT+ L P        +    +     LP+++      +R+E         GL+R+  
Sbjct: 231 EVQRTYGLIPTAEVPVTNLVRGEILEAENLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQ 290

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALW 441
           F + +       E+      ++      + +  G     V L T              +W
Sbjct: 291 FDKVELVQIVEPEKSMEALEELTGHAEKVLQLLGLPYRKVLLCTGDMGFGSCKTYDLEVW 350

Query: 442 DDAENIMKGV 451
             A+N  + +
Sbjct: 351 VPAQNTYREI 360


>gi|225075679|ref|ZP_03718878.1| hypothetical protein NEIFLAOT_00695 [Neisseria flavescens
           NRL30031/H210]
 gi|224952950|gb|EEG34159.1| hypothetical protein NEIFLAOT_00695 [Neisseria flavescens
           NRL30031/H210]
          Length = 874

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 61/143 (42%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFS 115
            S+     ++ R+  +  HS  H+M +A++ +  E     G  +  +   +D    Q  +
Sbjct: 544 DSVTAKVDDEIRNANMRNHSATHLMHKALRDVLGEHVEQKGSLVTAESTRFDISHPQAVT 603

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           ++E+ ++E+++ E +  +       +S E A++         K          + V + +
Sbjct: 604 AEEITEVERRVNEAVLANVAVNAAIMSMEDAQKTGAMMLFGEKY--------GDEVRVLQ 655

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G +  +LC G HV  TG +  F
Sbjct: 656 MGGFSTELCGGTHVSRTGDIGLF 678


>gi|104773942|ref|YP_618922.1| histidyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|123251924|sp|Q1GAG8|SYH_LACDA RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|103423023|emb|CAI97709.1| histidyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|325125611|gb|ADY84941.1| Histidyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus 2038]
          Length = 428

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 68/425 (16%), Positives = 134/425 (31%), Gaps = 76/425 (17%)

Query: 276 FQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           ++ +    R   K  +Y EI TP   +  L+ +S       +++   +  D   K  R  
Sbjct: 20  WEKVEQTARDLFKRANYHEIRTPSFENYELFSRSSGET---SDVVEKEMYDFEDKGGRHI 76

Query: 335 ALKPMNCPGHVAVFNHGLKSYREL--PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
           AL+P    G V  +        +   P  +    ++YR E   +     R R F Q    
Sbjct: 77  ALRPEGTAGVVRAYVENKIYGPDYVKPFNVYYIAAMYRYERPQA----GRQREFHQIGVE 132

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
            F +    +   ++   L   +  + G +   + ++T  +  V   A  D   +    V 
Sbjct: 133 SFGS--NGYLADVETILLGHDLLAELGVKNYELHINTLGDSEV-RQAYHDALVDYFTPVK 189

Query: 453 DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ--VDFNLPSRFNAFY 510
           D +   SQ R+    L           +   ++      +   I+  +D      FN   
Sbjct: 190 DQLSEDSQRRLGKNPLRI--------LDSKAEEDQQFLSEAPKIRDYLDEESKENFNKIL 241

Query: 511 VNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI-------------- 556
            +   +     +I   +   ++ + G++ E    +  LW SP   +              
Sbjct: 242 ASLD-KLGVKYVIDDDLVRGLDYYTGVIFEFMVDDPTLWASPSTVLGGGRYNHLVEEFSG 300

Query: 557 -----------------------------------VTTITSSAVEYAQEIANLLKSHHLS 581
                                              +T I       A E+A  L+S   S
Sbjct: 301 PETPAVGFGIGEERLMLVLSKQNPEMFEDQGIDFFITNIGEGTDIKAVEVARQLRSLGFS 360

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV---SLLDAI 638
            + D   + +  + R+        ++  G KE +E  + ++R        +    L D  
Sbjct: 361 AQYDVDQKKLKAQFRKADRVGARYVVTLGAKELAEGKLTVKRLSDGQQFSLEFTDLEDKT 420

Query: 639 PILTK 643
            +L+K
Sbjct: 421 NLLSK 425


>gi|85000409|ref|XP_954923.1| seryl-tRNA synthetase [Theileria annulata strain Ankara]
 gi|65303069|emb|CAI75447.1| seryl-tRNA synthetase, putative [Theileria annulata]
          Length = 532

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 51/154 (33%), Gaps = 11/154 (7%)

Query: 282 YMRRKIKDDYEEI-------NTPQVLDQHLW-QQSGHWDSYRANMFAVKCADDTIKDLRT 333
           +MR+++  +  E+           + D       +    +   N        +   D   
Sbjct: 272 FMRKEVMSECAELDDFETTLYCIPLTDSTAPNATADATKTTSTNGTRDMELKEKDVDKNK 331

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDD 390
             L   +     A+  + +   ++LP+R A   + +R E       L G+ RV  F + +
Sbjct: 332 LFLIATSEQPIAALHRNEVYQKKQLPIRYAGISTCFRREAGAHGKDLRGIFRVHQFQKVE 391

Query: 391 AHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
             V CT E    E  ++       Y+       +
Sbjct: 392 QFVVCTPENSIQEHEQMVKFSEEFYRSLKLPYRI 425


>gi|254230182|ref|ZP_04923576.1| seryl-tRNA synthetase [Vibrio sp. Ex25]
 gi|262394647|ref|YP_003286501.1| seryl-tRNA synthetase [Vibrio sp. Ex25]
 gi|151937320|gb|EDN56184.1| seryl-tRNA synthetase [Vibrio sp. Ex25]
 gi|262338241|gb|ACY52036.1| seryl-tRNA synthetase [Vibrio sp. Ex25]
          Length = 435

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/190 (13%), Positives = 63/190 (33%), Gaps = 11/190 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + +  +M     +   Y E+  P +++      +G    +  ++F  +   + + D
Sbjct: 172 ARLHRAIAQFMLDLHTEEHGYTEMYVPYLVNSDSLFGTGQLPKFGKDLFHTEPLAEKVND 231

Query: 331 L--RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRG 385
              R  +L P        +    +    +LP+++      +R+E         GL+R+  
Sbjct: 232 EEPRKLSLIPTAEVPVTNLVRDTISDEADLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQ 291

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALW 441
           F + +       E   N   ++      + +        V L T              +W
Sbjct: 292 FDKVELVQITKPEDSMNALEELTGHAEKVLQLLELPYRKVVLCTGDMGFGARKTYDLEVW 351

Query: 442 DDAENIMKGV 451
             A+   + +
Sbjct: 352 VPAQETYREI 361


>gi|50121568|ref|YP_050735.1| seryl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
 gi|67461745|sp|Q6D3V0|SYS_ERWCT RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|49612094|emb|CAG75544.1| seryl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
          Length = 431

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/188 (12%), Positives = 61/188 (32%), Gaps = 10/188 (5%)

Query: 273 WKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M      +  Y+E   P +++      +G    +  ++F      +   +
Sbjct: 171 ARLHRALAQFMLDLHTQQHGYQEAYVPYLVNHATLYGTGQLPKFGEDLFHTNPLSEEA-E 229

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
              +AL P        +    +     LP+++      +R+E         GL+R+  F 
Sbjct: 230 SSQYALIPTAEVPLTNLVRDEILDEESLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFD 289

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E       ++     ++ +        V L T              +W  
Sbjct: 290 KVELVQIVRPEDSMQALEELTTHAETVLQLLKLPYRKVLLCTGDMGFGSTKTYDLEVWLP 349

Query: 444 AENIMKGV 451
           A++  + +
Sbjct: 350 AQDTYREI 357


>gi|206889357|ref|YP_002248379.1| alanyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM 11347]
 gi|206741295|gb|ACI20352.1| alanyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM 11347]
          Length = 875

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/149 (22%), Positives = 65/149 (43%), Gaps = 11/149 (7%)

Query: 53  PVREGSIEIITPEDPRSLAVIR-HSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDK 110
            ++EG       +  R  A+ R H+  H++  A++++  E     G  +  D   +DF  
Sbjct: 543 TIKEGDKVFAKIDLERRKAIKRNHTATHLLHAALRTVLGEHVKQAGSLVAPDRLRFDFTH 602

Query: 111 EQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN 170
            +  + +EL +IE+ + E I  + P   +  S ++A     +     K E        + 
Sbjct: 603 FEAVNDEELREIERIVNEKILENLPVKIEIKSLDEALNEGVTALFEDKYE--------DT 654

Query: 171 VTLYRQ-GEWFDLCRGPHVRSTGQVKKFF 198
           V + +  G   +LC G H  STG++  F+
Sbjct: 655 VRVVKIVGFSKELCGGTHCDSTGEIGSFY 683


>gi|89073400|ref|ZP_01159924.1| seryl-tRNA synthetase [Photobacterium sp. SKA34]
 gi|89050887|gb|EAR56361.1| seryl-tRNA synthetase [Photobacterium sp. SKA34]
          Length = 435

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/190 (13%), Positives = 62/190 (32%), Gaps = 11/190 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + +  +M     +   Y E+  P +++      +G    +  ++F  +   + + D
Sbjct: 172 ARLHRAIAQFMLDLHTEEHGYTEMYVPYLVNADSLFGTGQLPKFGEDLFHTQPLTEKVND 231

Query: 331 L--RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRG 385
              R  +L P        +    +    +LPV++      +R+E         GL+R+  
Sbjct: 232 EEPRVLSLIPTAEVPVTNMMRDTITDEADLPVKMTAHTPCFRSEAGSYGRDTRGLIRMHQ 291

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALW 441
           F + +       E       ++      + +        V L T              +W
Sbjct: 292 FDKVELVQITKPEDSMAALEELTGHAEKVLQLLELPYRKVVLCTGDMGFGACKTYDLEVW 351

Query: 442 DDAENIMKGV 451
             A+   + +
Sbjct: 352 VPAQETYREI 361


>gi|315142868|gb|ADT81009.1| glutamyl- and prolyl-tRNA synthetase [Myrmekiaphila torreya]
          Length = 148

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 52/143 (36%), Gaps = 19/143 (13%)

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           GA +    E  +  + GR  Q  T   +  N    F   + +  + +     +++  +G 
Sbjct: 9   GANFTTTVEAYVP-SNGRAIQGATSHHLGQNFSKMFEIVFEHPDTVEKQ--YVYQNSWGL 65

Query: 531 IERFIGIMIENFKGNLPLWL----SPIQAIVTTITSSA----------VEYAQEIANLLK 576
             R IG+ +     N  L L    +P Q ++     +A           E  + +   L+
Sbjct: 66  SSRSIGVAVMVHGDNAGLVLPPRVAPHQVVIVPCGVTANLPESEKKLLAEKCEALEKELR 125

Query: 577 SHHLSIETDFR-NETINYKIREH 598
              + ++ D+R N +  +K    
Sbjct: 126 EASIRVKGDYRENYSPGWKFNHW 148


>gi|255065962|ref|ZP_05317817.1| alanine--tRNA ligase [Neisseria sicca ATCC 29256]
 gi|255049873|gb|EET45337.1| alanine--tRNA ligase [Neisseria sicca ATCC 29256]
          Length = 874

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/165 (23%), Positives = 67/165 (40%), Gaps = 14/165 (8%)

Query: 36  KKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           K AV     G V      V +  S EI    D R   +  HS  H+M +A++ +      
Sbjct: 525 KAAVHGQF-GAVVSGRLKVGDAVSAEI--DNDIRDSIMRNHSVTHLMHKALRDVLGTHVE 581

Query: 95  AIGPIIEDGF-YYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESK 153
             G +       +D    Q  S++E+A++E+++   I  + P   + +S E A++     
Sbjct: 582 QKGSLQNAELTRFDISHPQGISAEEIAEVERRVNAAIIANVPVKVETMSIEDAQKSGAMM 641

Query: 154 KEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
               K          + V +   G++  +LC G HV  TG +  F
Sbjct: 642 LFGEKY--------GDFVRVITMGDYSTELCGGTHVARTGDIGFF 678


>gi|189183879|ref|YP_001937664.1| alanyl-tRNA synthetase [Orientia tsutsugamushi str. Ikeda]
 gi|205830168|sp|B3CST3|SYA_ORITI RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|189180650|dbj|BAG40430.1| alanyl-tRNA synthetase [Orientia tsutsugamushi str. Ikeda]
          Length = 889

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/166 (23%), Positives = 64/166 (38%), Gaps = 18/166 (10%)

Query: 37  KAVAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAI 96
           K V+  IN     L+  V      +   +  R+   I HS  HI+  A++ I     +  
Sbjct: 546 KIVSGKIN-----LNAVVH-----MAIDKQYRTQLQIHHSATHILHAALREILGNHIIQK 595

Query: 97  GPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKE 155
           G ++  D   +D       S D L +IE ++ EII  ++    + +  ++A         
Sbjct: 596 GSLVAYDYLRFDVSHPTSISKDLLTKIENRVNEIILNNTAVKLRIMPFDQAIAHGAVALF 655

Query: 156 AYKVE---ILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFF 198
             K        SI    +   Y     F+LC G HV+ TG +  F 
Sbjct: 656 EEKYGDEVRAISIGETSDARYY----SFELCGGTHVKYTGDIGAFR 697


>gi|296116157|ref|ZP_06834775.1| histidyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769]
 gi|295977263|gb|EFG84023.1| histidyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769]
          Length = 417

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 70/201 (34%), Gaps = 30/201 (14%)

Query: 439 ALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQV 498
           A WDD    ++  LD +    ++  N  ++ G   +    FE+ + + +G          
Sbjct: 234 AFWDD----LRKTLDILGVPFRE--NPRIVRGLDYYSHTAFEF-VTERLGTQGTVLA--- 283

Query: 499 DFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVT 558
                 R++   V+       P +      G IER   ++ E          +P   +V 
Sbjct: 284 ----GGRYDGL-VSEMGGPQTPAIGWA---GGIERLSMLLDEAPA-------APRPVVVV 328

Query: 559 TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIP--IIIICGDKEASE 616
            +   A      +   L+  H+  ET +R    N K R     ++     I+ G+ E + 
Sbjct: 329 PMGEGAAATGITVLQALRGAHIRAETSYRG---NLKRRMERANRLNATHAIVIGEDEVAR 385

Query: 617 RSIGIRRFGSTTTQKVSLLDA 637
             + +R        +V++   
Sbjct: 386 GVVQVRDLDKGQQAEVAMDQV 406


>gi|229543743|ref|ZP_04432803.1| alanyl-tRNA synthetase [Bacillus coagulans 36D1]
 gi|229328163|gb|EEN93838.1| alanyl-tRNA synthetase [Bacillus coagulans 36D1]
          Length = 881

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 55/133 (41%), Gaps = 10/133 (7%)

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSDELAQIEKKMQEIIAR 132
            HS  H++ +A++ +        G ++E G   +DF      + +EL +IE  + E I  
Sbjct: 569 NHSATHLLHQALKDVLGVHVNQAGSLVEPGRLRFDFSHFGQVTEEELEKIETIVNEKIWA 628

Query: 133 DSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRST 191
             P        ++A+ +        K          E V + + G++  +LC G HV +T
Sbjct: 629 SLPVTTDLKKLDEAKAMGAMALFGEKY--------GEIVRVVQMGDYSLELCGGCHVSNT 680

Query: 192 GQVKKFFKLMKVA 204
            Q+  F  + +  
Sbjct: 681 AQIGLFKIVSESG 693


>gi|224025678|ref|ZP_03644044.1| hypothetical protein BACCOPRO_02418 [Bacteroides coprophilus DSM
           18228]
 gi|224018914|gb|EEF76912.1| hypothetical protein BACCOPRO_02418 [Bacteroides coprophilus DSM
           18228]
          Length = 454

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 12/91 (13%), Positives = 33/91 (36%)

Query: 553 IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
            Q +      +   Y   +    +   +  E    +  +  ++   + K IP + + G+ 
Sbjct: 364 TQLLFVNFGEAEAAYVLPVLMQAREAGIRAEIYPDSAKMKKQMGYANSKNIPFVALVGET 423

Query: 613 EASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           E +E  + ++   +     V+  + I  + K
Sbjct: 424 EMNEGKVTLKNMTTGEQTLVTPEELIAAIRK 454


>gi|220906685|ref|YP_002481996.1| histidyl-tRNA synthetase [Cyanothece sp. PCC 7425]
 gi|254782326|sp|B8HMM0|SYH_CYAP4 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|219863296|gb|ACL43635.1| histidyl-tRNA synthetase [Cyanothece sp. PCC 7425]
          Length = 429

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/217 (14%), Positives = 71/217 (32%), Gaps = 20/217 (9%)

Query: 424 MVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYIL 483
           + + + +    +G         + ++  L  +    +  +N  ++ G   +    FE+  
Sbjct: 217 ICQQAPQILNYLG--ETSRQHFDRVQQSLTDLGIPYE--LNHRLVRGLDYYTHTAFEFQT 272

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK 543
            +   +   CG  + D           V        P +         ER I ++     
Sbjct: 273 TELGAQATVCGGGRYDR---------LVTELGGPDTPAVGWAIGL---ERLILLLQHQ-- 318

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
            N+     P    +      A   A  +A  L+ H   +E D        +++       
Sbjct: 319 -NISYEAKPD-FYLVAKGEVAEPQALILAQKLRHHGFVVELDLSGSAFGKQLKRADRSGA 376

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPI 640
           P+ +I GD EA  +++ ++   S   + +S  D +  
Sbjct: 377 PLCLILGDAEAEAQTVQLKWLASGEQEVLSQTDLLDR 413


>gi|332981924|ref|YP_004463365.1| alanyl-tRNA synthetase [Mahella australiensis 50-1 BON]
 gi|332699602|gb|AEE96543.1| alanyl-tRNA synthetase [Mahella australiensis 50-1 BON]
          Length = 883

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/145 (20%), Positives = 60/145 (41%), Gaps = 11/145 (7%)

Query: 63  TPEDPRSLAVIR-HSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDELA 120
           T ++ R +A  R H+  H++ +A++          G  +  D   +DF    P +  EL 
Sbjct: 553 TVDEERRMATARNHTATHLLHKALRDTLGAHVEQAGSLVTPDRLRFDFSHFAPMTQQELD 612

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW- 179
           ++E ++ + I  D     + ++ E+AR+         K          + V +     + 
Sbjct: 613 RVEYEVNKHILDDLEVTIEEMAIEEARKTGAMALFDEKY--------GDKVRVVSIDAYS 664

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVA 204
            +LC G H++ TGQ   F  + +  
Sbjct: 665 KELCGGTHLKRTGQAGLFKIISESG 689


>gi|327537914|gb|EGF24613.1| histidyl-tRNA synthetase [Rhodopirellula baltica WH47]
          Length = 442

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/209 (13%), Positives = 65/209 (31%), Gaps = 25/209 (11%)

Query: 442 DDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFN 501
           +    I +G L +  +  + +I+  +  G   + G  FE  L +  G    C        
Sbjct: 247 ERLTQIYRGALASGVSPDRLKIDVSIARGLDYYTGVIFETTLDELPGIGSVCSG------ 300

Query: 502 LPSRFNAFYVNSHSEKCHPVMIHRAVFGSI---ERFIGIMIENFKGNLPLWLSPIQAIVT 558
                        +        H    G+    +R +  +     G L     P    V 
Sbjct: 301 ---------GRYDNLAGLYTKQHLPGIGASLGLDRLLAAL--ESLGRLSGVSKPCAVFVP 349

Query: 559 TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERS 618
                  +   ++A+ L+   + +E     + +  +++    +   + II G  E    +
Sbjct: 350 FFDKGHRDDYLKLASQLRDAGIGVEVYPEPKKLGQQLKYADSQGFAVAIIAGGNEWEAGT 409

Query: 619 IGIRRFGSTTTQKV-----SLLDAIPILT 642
           + ++   +  +Q V     S    I  + 
Sbjct: 410 VQVKTLATKESQDVAYSHESPDALIEAIQ 438


>gi|256841698|ref|ZP_05547204.1| alanyl-tRNA synthetase [Parabacteroides sp. D13]
 gi|256736592|gb|EEU49920.1| alanyl-tRNA synthetase [Parabacteroides sp. D13]
          Length = 873

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/219 (15%), Positives = 72/219 (32%), Gaps = 27/219 (12%)

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIA 131
             HS  H++ EA++ +        G  +  D   +DF   Q  + +E+ ++E  + E I 
Sbjct: 561 CNHSATHLLHEALREVLGTHVEQKGSYVSPDSLRFDFSHFQKVTDEEIRKVEILVGEKIR 620

Query: 132 RDSPFL-KQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRS 190
            + P    + +   +A+ L        K          + V + + G   +LC G H+ +
Sbjct: 621 ANFPLEEHRNMPIAEAKALGAMALFGEKY--------GDEVRVVKYGSSVELCGGTHIPA 672

Query: 191 TGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLA 250
           TG +     + + +       +               Q    Q     E     +H    
Sbjct: 673 TGMIGSLHVIGESSI------AAGVRRIEAVTAEGAEQFVYAQQDLIRELRALMNHMPNL 726

Query: 251 REMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
            +     I E+            ++ + +  Y+R K   
Sbjct: 727 AQAMKKSIEEN-----------AEMKKQIEDYIREKSMR 754


>gi|294661131|ref|YP_003573006.1| hypothetical protein Aasi_1519 [Candidatus Amoebophilus asiaticus
           5a2]
 gi|227336281|gb|ACP20878.1| hypothetical protein Aasi_1519 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 434

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/224 (14%), Positives = 72/224 (32%), Gaps = 16/224 (7%)

Query: 219 RIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWK 274
            I   + + +            ++   H +L    ++          G+G   +  KG +
Sbjct: 128 PIGKDSTSNEIVYQVESIPEHTAQLIPHWELITTYNIIDFELGNKLTGAGFPVYKGKGAR 187

Query: 275 IFQTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           + + LI++ +    K  YEEI  P ++++          +Y       K           
Sbjct: 188 LQRALINFFLDEARKAGYEEIQPPILVNK--------ASAYGTGQLPDKEGQMYELANEP 239

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDD 390
             L P        ++   + S   LP+R   +   +R E       + GL R+  F + +
Sbjct: 240 LYLIPTAEVPVTNLYRDQILSKDVLPIRHVAYTPCFRREAGSWGSHVRGLNRLHQFDKVE 299

Query: 391 AHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
                  E  +     +   + S+ +       ++KL +     
Sbjct: 300 IVEISLPELSYQALETMRRYVESLVQKLELPYRVLKLCSGDLGF 343


>gi|212550895|ref|YP_002309212.1| seryl-tRNA synthetase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
 gi|212549133|dbj|BAG83801.1| seryl-tRNA synthetase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
          Length = 424

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 75/198 (37%), Gaps = 16/198 (8%)

Query: 245 DHRKLAREMDLFHIA----EDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQV 299
            H +LA++ DL          GSG   + +KG ++ + LI++ +    K DY EI  P +
Sbjct: 143 PHWELAKKYDLIDFELGVKITGSGFPVYKQKGAQLQRALINFFLDNARKADYIEIQPPYM 202

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           ++           +Y       K       ++    L P        ++ + +   ++LP
Sbjct: 203 INARS--------AYGTGQLPDKEGQMYHYEMDELYLIPTAEVPLTNIYRNIILDEKDLP 254

Query: 360 VRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ++   + + +R E       + GL R+  F + +     T +  +    ++ + + ++  
Sbjct: 255 IKNTAYSACFRREAGSYGKDVRGLNRLHQFDKVEIVRIDTPDHSYESLQEMVSYVQTLIG 314

Query: 417 DFGFEKIMVKLSTRPEKR 434
                  +++L       
Sbjct: 315 KLELPWRLLRLCGGDMSF 332


>gi|161870532|ref|YP_001599704.1| seryl-tRNA synthetase [Neisseria meningitidis 053442]
 gi|189083575|sp|A9M1Q6|SYS_NEIM0 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|161596085|gb|ABX73745.1| seryl-tRNA synthetase [Neisseria meningitidis 053442]
 gi|254674222|emb|CBA10006.1| Seryl-tRNA synthetase [Neisseria meningitidis alpha275]
          Length = 431

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 64/188 (34%), Gaps = 11/188 (5%)

Query: 273 WKIFQTLISYMRRK--IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M     ++  Y E  TP ++D    Q +G    +  ++F V    D  K 
Sbjct: 171 ARLHRALAQFMLDTHTLQHGYTEHYTPYIVDDTTLQGTGQLPKFAEDLFHVTRGGDETKT 230

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
            +     P             +    +LP++L      +R+E         GL+R   F 
Sbjct: 231 TQYLI--PTAEVTLTNTVADSIIPSEQLPLKLTAHSPCFRSEAGSYGKDTRGLIRQHQFD 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E+ +    ++     +I K       ++ L T              +W  
Sbjct: 289 KVEMVQIVHPEKSYETLEEMVGHAENILKALELPYRVITLCTGDMGFGAAKTYDLEVWVP 348

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 349 AQNTYREI 356


>gi|21242570|ref|NP_642152.1| histidyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str.
           306]
 gi|32130119|sp|Q8PLH2|SYH_XANAC RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|21108029|gb|AAM36688.1| histidyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str.
           306]
          Length = 478

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/215 (17%), Positives = 79/215 (36%), Gaps = 17/215 (7%)

Query: 434 RVGSDALWDDAENIMKGVLDTIKNSSQDR----INTGVLLGEGAFYGPKFEYILKDAIGR 489
            VG+ A   +    ++ VL+ +K          +N  +  G   + G  +E  L D    
Sbjct: 261 SVGASATLGEGIAELREVLELVKALGVPESAYCLNFSIARGLDYYTGTVYETTLTDHP-- 318

Query: 490 DWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW 549
             Q G+I        R+++   +    K   V I   +     R    + E       + 
Sbjct: 319 --QIGSICSGG----RYDSLASHYTKSKLPGVGISIGL----TRLFWQLRE-AGLIQGIA 367

Query: 550 LSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIIC 609
            S +QA+V  +  + ++ A +IA  L+   ++ E     + I  + +  +   I  +++ 
Sbjct: 368 ESSVQAMVALMDETRLDDALDIARRLRIGGINTEVQMEPKKIGKQFQYAARAGIRFVVLA 427

Query: 610 GDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           GD E +   + ++         V+  +    L  E
Sbjct: 428 GDDELARGVVAVKDLVREQQFDVARDELASTLQVE 462



 Score = 38.2 bits (87), Expect = 4.4,   Method: Composition-based stats.
 Identities = 41/229 (17%), Positives = 77/229 (33%), Gaps = 19/229 (8%)

Query: 259 AEDGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQ-----VLDQHLWQQSGHWD 312
                G++    +    FQ ++  +RR  +   +  + TP      VL      ++    
Sbjct: 4   PRTPPGIMELLPREQIAFQRMLDVIRRNYERFGFLPVETPVFELSDVLLTKSGGETERQV 63

Query: 313 SYRANMFAVKCADDTIKDLRTFALKPMNCPGH---VAVFNHGLKSYREL--PVRLAEFGS 367
            +  +  A+  A     +       P         V +  +  +   +L  P R  +   
Sbjct: 64  YFVQSTGALANAAAAADEGAENGGLPELALRFDLTVPLARYVAEHEHDLSFPFRRYQMQR 123

Query: 368 VYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKL 427
           VYR E +       R R F Q D  V            ++  +I +++ + G     V+L
Sbjct: 124 VYRGERAQR----GRFREFYQCDIDVIGKDALSIRYDAEVLAVIHAVFAELGIGDFKVQL 179

Query: 428 STRPEKRVGSDALWDDAENIMK-GVLDTIKNSSQDRINTG--VLLGEGA 473
           + R   R G       AE  ++  VL  +    +   +     L+GEG 
Sbjct: 180 NNRKLLR-GFFESLGVAEGELQLAVLREVDKIDKRGADYVRDTLVGEGF 227


>gi|107029010|ref|YP_626105.1| histidyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
 gi|116689832|ref|YP_835455.1| histidyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
 gi|123179919|sp|Q1BGX3|SYH_BURCA RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|166227947|sp|A0K7T5|SYH_BURCH RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|105898174|gb|ABF81132.1| histidyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
 gi|116647921|gb|ABK08562.1| histidyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
          Length = 446

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 62/405 (15%), Positives = 126/405 (31%), Gaps = 73/405 (18%)

Query: 289 DDYEEINTPQVLDQHLWQ--QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA 346
             Y+ I TP V    L+        D     M++   A +         ++P N    V 
Sbjct: 42  YGYQNIRTPIVEHTQLFTRGIGEVTDIVEKEMYSFTDALN----GENLTMRPEN-TAAVV 96

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD--DAHVFCTKEQMFNEC 404
             +       + P RL   G ++R+E         R R F Q   +A  F   +      
Sbjct: 97  RASIEHNMLYDGPKRLWYIGPMFRHERPQR----GRYRQFHQVGVEALGFAGPDADA--- 149

Query: 405 LKIHNLIISIYKDFG--------------FEKIMVKLSTRPEKRVGSDALWDDAENIM-- 448
            +I  +   ++ D G               E+   ++         +D L +DA+  +  
Sbjct: 150 -EIIMMCQRLWDDLGLTGIKLEINSLGLAEERAAHRVELIKYLEQFADVLDEDAKRRLYT 208

Query: 449 ---------KGVLDTIKNSSQDRINTGVLLGEGAFYGP-------KFEYILKDAIGRDWQ 492
                       L  I  ++   I+         F G           + +   + R   
Sbjct: 209 NPLRVLDTKNPALQDIAQNAPKLIDFLGDESRAHFEGLQRLLLANNIPFKINPRLVRGLD 268

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIH-------RAVFGS-IERFIGIMIENFKG 544
              + V   +  +  A    +   +  P++            +   IER + ++ E    
Sbjct: 269 YYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQLGGKPTAACGWAMGIERILELLKEED-- 326

Query: 545 NLPLWLSPIQ----AIVTTITSSAVEYAQEIANLLKSHHLSI----ETDFRNETINYKIR 596
                L+P Q      V     +A E A   A  L+   L +      D    +   +++
Sbjct: 327 -----LAPEQEGVDVYVVHQGDTAREQAFIAAERLRDTGLDVIFHCSADGAPASFKSQMK 381

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRR-FGSTTTQKVSLLDAIPI 640
                     +I G++E +  ++G++   G+    + ++   +P+
Sbjct: 382 RADASGAAFAVIFGEEEVANGTVGVKALRGAGAEGEKNVQQTVPV 426


>gi|325204646|gb|ADZ00100.1| seryl-tRNA synthetase [Neisseria meningitidis M01-240355]
          Length = 431

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 64/188 (34%), Gaps = 11/188 (5%)

Query: 273 WKIFQTLISYMRRK--IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M     ++  Y E  TP ++D    Q +G    +  ++F V    D  K 
Sbjct: 171 ARLHRALAQFMLDTHTLQHGYTEHYTPYIVDDTTLQGTGQLPKFAEDLFHVTRGGDETKT 230

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
            +     P             +    +LP++L      +R+E         GL+R   F 
Sbjct: 231 TQYLI--PTAEVTLTNTVADSIIPSEQLPLKLTAHSPCFRSEAGSYGKDTRGLIRQHQFD 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E+ +    ++     +I K       ++ L T              +W  
Sbjct: 289 KVEMVQIVHPEKSYETLEEMVGHAENILKALELPYRVITLCTGDMGFGATKTYDLEVWVP 348

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 349 AQNTYREI 356


>gi|262305781|gb|ACY45483.1| glu- + pro-tRNA synthetase [Pedetontus saltator]
          Length = 134

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 50/133 (37%), Gaps = 18/133 (13%)

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           G  Y    E     A GR  Q GT   +  N    F+  Y     E     ++++  +G 
Sbjct: 1   GGDYTTTVE-AFISASGRGIQGGTSHHLGQNFSKMFDIVY--EDPETHEKKLVYQNSWGL 57

Query: 531 IERFIGIMIENFKGNLPLWLSP----IQAIVTTIT----------SSAVEYAQEIANLLK 576
             R IG+MI     N  L L P    IQ ++               S +   +++ + L 
Sbjct: 58  TTRTIGVMIMVHADNQGLVLPPNVACIQVVIVPCGITATMKDAERDSLLNSCKDLESELX 117

Query: 577 SHHLSIETDFRNE 589
           +  + ++ D+R+ 
Sbjct: 118 AGGVRVKGDYRDN 130


>gi|261392091|emb|CAX49588.1| seryl-tRNA synthetase (serine--tRNA ligase; SerRS) [Neisseria
           meningitidis 8013]
          Length = 431

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 64/188 (34%), Gaps = 11/188 (5%)

Query: 273 WKIFQTLISYMRRK--IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M     ++  Y E  TP ++D    Q +G    +  ++F V    D  K 
Sbjct: 171 ARLHRALAQFMLDTHTLQHGYTEHYTPYIVDDTTLQGTGQLPKFAEDLFHVTRGGDETKT 230

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
            +     P             +    +LP++L      +R+E         GL+R   F 
Sbjct: 231 TQYLI--PTAEVTLTNTVADSIIPSEQLPLKLTAHSPCFRSEAGSYGKDTRGLIRQHQFD 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E+ +    ++     +I K       ++ L T              +W  
Sbjct: 289 KVEMVQIVHPEKSYETLEEMVGHAENILKALELPYRVITLCTGDMGFGATKTYDLEVWVP 348

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 349 AQNTYREI 356


>gi|332993163|gb|AEF03218.1| seryl-tRNA synthetase [Alteromonas sp. SN2]
          Length = 430

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 66/188 (35%), Gaps = 12/188 (6%)

Query: 273 WKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + +  +M      +  Y+E+  P +++      +G    +  ++F  + A    ++
Sbjct: 171 ARLNRAIAQFMLDVHTTEHGYDEMYVPFLVNADSLYGTGQLPKFGEDLFHTQPA---TEE 227

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
            +  +L P        +    +   + LP+++      +R+E         GL+R   F 
Sbjct: 228 GQGLSLIPTAEVPLTNIARDEILDEKSLPIKMTAHTPCFRSEAGSYGRDTRGLIRQHQFD 287

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E  F+   ++     +I +        V L T              +W  
Sbjct: 288 KVELVQLVKPEDSFDALEELTQHAETILQKLELPYRKVLLCTGDMGFGACKTYDLEVWLP 347

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 348 AQNTYREI 355


>gi|60682707|ref|YP_212851.1| histidyl-tRNA synthetase [Bacteroides fragilis NCTC 9343]
 gi|81314233|sp|Q5LAE0|SYH_BACFN RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|60494141|emb|CAH08933.1| putative histidyl-tRNA synthetase [Bacteroides fragilis NCTC 9343]
          Length = 454

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/204 (16%), Positives = 72/204 (35%), Gaps = 19/204 (9%)

Query: 442 DDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFN 501
           +++E I+   L T+   ++  ++  +  G   + G  FE    D        G      N
Sbjct: 268 EESEFIL-NTLQTMGLKNEIELDLTLARGLNYYTGAIFEVKALDVQIGSITGGGR--YDN 324

Query: 502 LPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM--IENFKGNLPLWLSPIQAIVTT 559
           L   F    V+              +    +R   ++  +E +       ++  Q +   
Sbjct: 325 LTGVFGMAGVSGVG-----------ISFGADRIFDVLNQLELYPKEA---VNGTQLLFIN 370

Query: 560 ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSI 619
                  ++  I +  ++  +  E       +  ++   ++K IP + I G+ E +E   
Sbjct: 371 FGEKEAAFSMGILSKARAAGIRAEIFPDAAKMKKQMSYANVKNIPFVAIVGENEMNEGKA 430

Query: 620 GIRRFGSTTTQKVSLLDAIPILTK 643
            ++   S   Q V+  + I  LTK
Sbjct: 431 MLKNMESGEQQLVTAEELIGALTK 454


>gi|116513950|ref|YP_812856.1| histidyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
 gi|122275280|sp|Q04AV4|SYH_LACDB RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|116093265|gb|ABJ58418.1| histidyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
          Length = 428

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 68/425 (16%), Positives = 134/425 (31%), Gaps = 76/425 (17%)

Query: 276 FQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           ++ +    R   K  +Y EI TP   +  L+ +S       +++   +  D   K  R  
Sbjct: 20  WEKVEQTARDLFKRANYHEIRTPSFENYELFSRSSGET---SDVVEKEMYDFEDKGGRHI 76

Query: 335 ALKPMNCPGHVAVFNHGLKSYREL--PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
           AL+P    G V  +        +   P  +    ++YR E   +     R R F Q    
Sbjct: 77  ALRPEGTAGVVRAYVENKIYGPDYVKPFNVYYIAAMYRYERPQA----GRQREFHQIGVE 132

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
            F +    +   ++   L   +  + G +   + ++T  +  V   A  D   +    V 
Sbjct: 133 SFGS--NGYLADVETILLGHDLLAELGVKNYELHINTLGDSEV-RQAYHDALVDYFTPVK 189

Query: 453 DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ--VDFNLPSRFNAFY 510
           D +   SQ R+    L           +   ++      +   I+  +D      FN   
Sbjct: 190 DQLSEDSQRRLGKNPLRI--------LDSKAEEDQQFLSEAPKIRDYLDEESKENFNKIL 241

Query: 511 VNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI-------------- 556
            +   +     +I   +   ++ + G++ E    +  LW SP   +              
Sbjct: 242 ASLD-KLGVKYVIDDDLVRGLDYYTGVIFEFMVDDPTLWASPSTVLGGGRYNHLVEEFSG 300

Query: 557 -----------------------------------VTTITSSAVEYAQEIANLLKSHHLS 581
                                              +T I       A E+A  L+S   S
Sbjct: 301 PETPAVGFGIGEERLMLVLSKQNPEMFEDQGIDFFITNIGEGTDIKAVEVARQLRSLGFS 360

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV---SLLDAI 638
            + D   + +  + R+        ++  G KE +E  + ++R        +    L D  
Sbjct: 361 AQYDVDQKKLKAQFRKADRVGARYVVTLGAKELAEGKLTVKRLSDGQQFSLEFTDLEDKA 420

Query: 639 PILTK 643
            +L+K
Sbjct: 421 NLLSK 425


>gi|71274488|ref|ZP_00650776.1| Seryl-tRNA synthetase, class IIa [Xylella fastidiosa Dixon]
 gi|71898321|ref|ZP_00680494.1| Seryl-tRNA synthetase, class IIa [Xylella fastidiosa Ann-1]
 gi|170730591|ref|YP_001776024.1| seryl-tRNA synthetase [Xylella fastidiosa M12]
 gi|238687926|sp|B0U3G5|SYS_XYLFM RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|71164220|gb|EAO13934.1| Seryl-tRNA synthetase, class IIa [Xylella fastidiosa Dixon]
 gi|71731844|gb|EAO33902.1| Seryl-tRNA synthetase, class IIa [Xylella fastidiosa Ann-1]
 gi|167965384|gb|ACA12394.1| Serine--tRNA ligase [Xylella fastidiosa M12]
          Length = 426

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/188 (13%), Positives = 67/188 (35%), Gaps = 15/188 (7%)

Query: 273 WKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L   M      +  YEE+N P +++      +G    +  +MF+ +  +     
Sbjct: 171 ARLHRALAQCMLDLHVSQHGYEEVNVPIIVNADSLHGTGQLPKFEEDMFSTQLGEH---- 226

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
            R + +   +      +  + +     LP+R+      +R+E         G++R   F 
Sbjct: 227 -RRYLIS-TSEISLTNLVRNEIIEADRLPLRMVAHSLCFRSEAGSGGRDTRGMIRQHQFE 284

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALWDD 443
           + +    C  ++   E  ++     ++ +  G     + L T              +W  
Sbjct: 285 KVELVSVCKPQESEGEHHRMTRCAETVLEMLGLPYRKILLCTGDMGFAATKTYDLEVWLP 344

Query: 444 AENIMKGV 451
           ++ + + +
Sbjct: 345 SQGMYREI 352


>gi|329737303|gb|EGG73557.1| alanine--tRNA ligase [Staphylococcus epidermidis VCU028]
          Length = 552

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 63/152 (41%), Gaps = 10/152 (6%)

Query: 55  REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQP 113
           +   +E    ++ R L    HS  H++  A++ +  +     G ++E     +DF    P
Sbjct: 221 QNAKVEARVNKEDRRLIQKNHSATHLLHAALKEVLGDHVNQAGSLVEPERLRFDFSHFGP 280

Query: 114 FSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTL 173
            + +E+  +E+++ E I R      Q +S E+A+ +        K          + V +
Sbjct: 281 MTQEEINLVERRVNEEIWRAIDVCIQEMSIEEAKSIGAMALFGEKY--------GDIVRV 332

Query: 174 YRQGEW-FDLCRGPHVRSTGQVKKFFKLMKVA 204
                +  +LC G HV +T ++  F  + +  
Sbjct: 333 VNMAPFSIELCGGIHVNNTAEIGLFKIVSESG 364


>gi|262384031|ref|ZP_06077167.1| alanyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
 gi|262294929|gb|EEY82861.1| alanyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
          Length = 873

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/219 (15%), Positives = 72/219 (32%), Gaps = 27/219 (12%)

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIA 131
             HS  H++ EA++ +        G  +  D   +DF   Q  + +E+ ++E  + E I 
Sbjct: 561 CNHSATHLLHEALREVLGTHVEQKGSYVSPDSLRFDFSHFQKVTDEEIRKVEILVGEKIR 620

Query: 132 RDSPFL-KQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRS 190
            + P    + +   +A+ L        K          + V + + G   +LC G H+ +
Sbjct: 621 ANFPLEEHRNMPIAEAKALGAMALFGEKY--------GDEVRVVKYGSSVELCGGTHIPA 672

Query: 191 TGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLA 250
           TG +     + + +       +               Q    Q     E     +H    
Sbjct: 673 TGMIGSLHVIGESSI------AAGVRRIEAVTAEGAEQFVYAQQDLIRELRALMNHMPNL 726

Query: 251 REMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
            +     I E+            ++ + +  Y+R K   
Sbjct: 727 AQAMKKSIEEN-----------AEMKKQIEDYIREKSMR 754


>gi|258517403|ref|YP_003193625.1| seryl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
 gi|257781108|gb|ACV65002.1| seryl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
          Length = 423

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/213 (16%), Positives = 77/213 (36%), Gaps = 18/213 (8%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIF 276
           G +     E+  +    +   E + H  +   +D+          G+   F+   G ++ 
Sbjct: 114 GKSETDNIEIRLWGEPTKFDFEPKAHWDIGEGLDIIDFERGAKVTGARFSFYKGLGARLE 173

Query: 277 QTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           + LI++M      + +Y EI  P + +Q   Q +G    +  +MF +        +   +
Sbjct: 174 RALINFMLDLHTSQHNYVEIFPPFIANQDSMQGTGQLPKFAEDMFKL--------ENTNY 225

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDA 391
            L P        ++   +    +LP+    + + +R E   +     GL+R   F + + 
Sbjct: 226 YLIPTAEVPVTNLYREEILDGEKLPICHVAYSACFRAEAGAAGRDTRGLIRQHQFNKVEM 285

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
             FC  +  F E  K+      + +       +
Sbjct: 286 VKFCHPDTSFEELDKLVLNAEKVLQLLELPYRL 318


>gi|84623645|ref|YP_451017.1| seryl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|161898995|ref|YP_200755.2| seryl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|188576837|ref|YP_001913766.1| seryl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|188577030|ref|YP_001913959.1| seryl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|123522189|sp|Q2P3Y4|SYS_XANOM RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|84367585|dbj|BAE68743.1| seryl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|188521289|gb|ACD59234.1| seryl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|188521482|gb|ACD59427.1| seryl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 449

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/205 (13%), Positives = 63/205 (30%), Gaps = 26/205 (12%)

Query: 273 WKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M      +  YEE N P +++    + +G    +  ++F +   +     
Sbjct: 171 ARLHRALAQFMLDLHVGEHGYEETNVPLLVNADSMRGTGQLPKFEDDLFRIYENEYEGHT 230

Query: 331 LRT-----------------FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP 373
                               + L P +      +    +     LP+R+      +R E 
Sbjct: 231 DEETGESFYTPTGGVDPDPAYYLIPTSEVPLTNIVRDEIIDAERLPLRMTAHSMCFRAEA 290

Query: 374 ---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR 430
                   G++R   F + +    C  E    E  ++      + +  G     V L T 
Sbjct: 291 GSGGRDTRGMIRQHQFEKVELVTACAPEDSDAEHQRMTRCAEVVLEQLGLPYRKVLLCTG 350

Query: 431 PEKR----VGSDALWDDAENIMKGV 451
                        +W  ++N  + +
Sbjct: 351 DMGFSAIKTYDLEVWLPSQNTYREI 375


>gi|16081587|ref|NP_393946.1| seryl-tRNA synthetase [Thermoplasma acidophilum DSM 1728]
 gi|13878795|sp|Q9HKX5|SYS_THEAC RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|10639638|emb|CAC11610.1| probable seryl-tRNA synthetase [Thermoplasma acidophilum]
          Length = 441

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 73/188 (38%), Gaps = 16/188 (8%)

Query: 273 WKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
            K+   L +Y    + +  +  +  P +L+    + +   ++++  ++ +        + 
Sbjct: 191 LKLEMALENYAVDFLSQRGFSIVEPPYMLNLESMRGATDLETFKDTLYKI--------EG 242

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQ 388
               L   +     A+ ++     ++LP+R+A   + +R E         G+ RV  F +
Sbjct: 243 EDLYLIATSEHSIAAMLSNQFLEEKDLPLRVAGISACFRREAGAHGKDTKGIFRVHQFNK 302

Query: 389 DDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST----RPEKRVGSDALWDDA 444
            +  VFC  E  ++   +I     +IY+  G    +V + +    R   +      W  A
Sbjct: 303 IEQFVFCKPEDSWDFLEEILGNAEAIYRSLGIPYRVVNVCSGELGRLAAKKYDIEAWFPA 362

Query: 445 ENIMKGVL 452
           +   + ++
Sbjct: 363 QGKFREIV 370


>gi|315142844|gb|ADT80997.1| glutamyl- and prolyl-tRNA synthetase [Myrmekiaphila comstocki]
          Length = 148

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/143 (16%), Positives = 53/143 (37%), Gaps = 19/143 (13%)

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           GA +    E  +  + GR  Q  T   +  N    F+  + +  + +     +++  +G 
Sbjct: 9   GADFTTTVEAYVP-SNGRAIQGATSHHLGQNFSKMFDIVFEHPDAVEKQ--YVYQNSWGL 65

Query: 531 IERFIGIMIENFKGNLPLWL----SPIQAIVTTITSSA----------VEYAQEIANLLK 576
             R IG+ +     N  L L    +P Q ++     +A           +  + +   L+
Sbjct: 66  SSRSIGVAVMVHGDNAGLVLPPRVAPHQVVIVPCGVTANLPESEKKLLAQKCEALEKELR 125

Query: 577 SHHLSIETDFR-NETINYKIREH 598
              + ++ D+R N +  +K    
Sbjct: 126 EASIRVKGDYRENYSPGWKFNHW 148


>gi|301164185|emb|CBW23743.1| putative histidyl-tRNA synthetase [Bacteroides fragilis 638R]
          Length = 454

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 16/91 (17%), Positives = 36/91 (39%)

Query: 553 IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
            Q +          ++  I +  ++  +  E       +  ++   ++K IP + I G+ 
Sbjct: 364 TQLLFINFGEKEAAFSMGILSKARAAGIRAEIFPDAAKMKKQMSYANVKNIPFVAIVGEN 423

Query: 613 EASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           E +E    ++   +   Q V+  + I  LTK
Sbjct: 424 EMNEGKAMLKNMENGEQQLVTAEELIGALTK 454


>gi|172040627|ref|YP_001800341.1| histidyl-tRNA synthetase [Corynebacterium urealyticum DSM 7109]
 gi|229558650|sp|B1VDK9|SYH_CORU7 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|171851931|emb|CAQ04907.1| unnamed protein product [Corynebacterium urealyticum DSM 7109]
          Length = 427

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 50/406 (12%), Positives = 119/406 (29%), Gaps = 57/406 (14%)

Query: 281 SYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
           +++       YE I  P   D  L+ +         ++ + +      +  R+  L+P  
Sbjct: 35  AFLDAAHNAGYEHIELPVFEDTSLFARG---VGESTDVVSKEMYTFADRGGRSVTLRPEG 91

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQM 400
             G +           +LP +LA  G  +R E   +     R R   Q         +  
Sbjct: 92  TAGVMRAVIQHNLDRGQLPAKLAYHGPFFRYERPQA----GRFRQLQQVGVEAIGVDDPA 147

Query: 401 FNECLKIHNLIISIYKDFGFE----------KIMVKLSTRPEKRVG------SDALWDDA 444
            +   ++  L    ++  G +              + + R + +         +     A
Sbjct: 148 LDA--EVIALADRCFRSIGLDGFRLELTSLGDSTDRPAYRAKLQEFLATLPLDEETQRRA 205

Query: 445 ENIMKGVLDTIKNSSQDRIN--------------------TGVLLGEGAFYGPK------ 478
           E     VLD  +   Q+ +                     TG+L   G  Y         
Sbjct: 206 ELNPLRVLDDKRPQMQEMLADAPLMKDHLSDSSREHFETVTGLLEDMGVEYTINPRMVRG 265

Query: 479 FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM 538
            +Y  K            Q       R++        +    +       G     + + 
Sbjct: 266 LDYYTKTCFEFVHDGLGAQSGIGGGGRYDGLMAQLGGQDLSGIGF---GLGVDRALLALE 322

Query: 539 IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREH 598
            E   G        +      +  +A  +   + N L++  ++ +  + N  +   ++  
Sbjct: 323 AE---GKTASTGRRVDVFGIPMGDAAKRHMAALINELRAAGVAADMAYGNRGLKGAMKAA 379

Query: 599 SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +     + ++ GD+E    ++ ++         V++ D +  + ++
Sbjct: 380 NRAHAQLAVVIGDQELEAGTVAVKDLQLGEQHDVAVADLVTHIRRQ 425


>gi|319740169|gb|ADV60378.1| glu- + pro-tRNA synthetase [Manduca sexta]
          Length = 134

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/133 (23%), Positives = 56/133 (42%), Gaps = 18/133 (13%)

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           GA Y    E  +  A GR  Q  T   +  N    F   Y ++ +++ +   +++  +G 
Sbjct: 1   GADYTTTVEAYVP-ASGRAIQGATSHHLGQNFSKMFEIVYDDAETQEKN--YVYQNSWGI 57

Query: 531 IERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSAVEYAQE----------IANLLK 576
             R IG+M+    ++    LP  ++ IQAIV     +A   A E          + + L 
Sbjct: 58  TTRTIGVMVLVHGDDKGLVLPPRIAEIQAIVVPCGVTAASTADERKALIDSCXALVDDLL 117

Query: 577 SHHLSIETDFRNE 589
           +  +  E D+R+ 
Sbjct: 118 AAGIRAEGDYRDN 130


>gi|319940132|ref|ZP_08014486.1| histidyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
 gi|319810846|gb|EFW07173.1| histidyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
          Length = 426

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 62/408 (15%), Positives = 129/408 (31%), Gaps = 62/408 (15%)

Query: 276 FQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           +Q +  + R+  K   Y EI TP       ++          ++   +  D   K  R  
Sbjct: 20  WQYVEEFARKTFKKYHYAEIRTPLF---EHYEVISRSVGDTTDIVTKEMYDFYDKGDRHI 76

Query: 335 ALKPMNCPGHVAVFNHGLKS-----YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQ- 388
            L+P    G   V    +++       + PV+L   GS++R E   +     R+R F Q 
Sbjct: 77  TLRP---EGTAPVVRSYVENKLFAPEVQKPVKLYYMGSMFRYERPQA----GRLREFHQI 129

Query: 389 --------DDAHVFCTKEQMFNECLKIHNLIISI-YKDFGFEKIMVKLSTRPEKRVG--S 437
                   + A    T         +I    +++     G  +            +    
Sbjct: 130 GVECFGSNNPATDVETIAMAAQFFNEIGIQGVTLQLNSLGNAESRAAYRQALIDYLTPLK 189

Query: 438 DALWDDAENIMKG----VLDTIKNSSQDR-------INTGVLLGEGAFYGPKFEYILKDA 486
           D+L  D++  ++     VLD+ +   +         ++      +  F   +    + +A
Sbjct: 190 DSLSKDSQRRLEENPLRVLDSKEKEDKLAVENAPSILDYLDEESQTHFQAVR---SMLEA 246

Query: 487 IGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG---------- 536
           +G  +   T  V          F   +        +     + S+  + G          
Sbjct: 247 LGIPYIINTNMVRGLDYYNHTIFEFTADVAGNELTICAGGRYDSLVAYFGGPETAGFGFG 306

Query: 537 ------IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
                 +++   +G +      +   +  +   A   A EI   L+    + E D+ N  
Sbjct: 307 MGVERLLLVLEKQGVVLPLEDSLDVYIAVLGDGANNKALEIVQALRKQGFTAERDYLNRK 366

Query: 591 I--NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
           +   +K  +    K+  +I  G+ E     + I+   +     VSL  
Sbjct: 367 LKAQFKSADAFSAKV--LITLGESEIESNQVTIKNNQTREELTVSLNQ 412


>gi|307354815|ref|YP_003895866.1| seryl-tRNA synthetase [Methanoplanus petrolearius DSM 11571]
 gi|307158048|gb|ADN37428.1| seryl-tRNA synthetase [Methanoplanus petrolearius DSM 11571]
          Length = 425

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 41/226 (18%), Positives = 82/226 (36%), Gaps = 26/226 (11%)

Query: 242 EKRDHRKLAREMDL--FHIAEDGSGVIFWHRKG------WKIFQTLISYMRRKIKDDYEE 293
           E ++H +LA E  L  F  A   SG  F+  KG        + +  I  +       Y  
Sbjct: 138 EVKNHGELAIEKGLAEFERAAKISGAGFYILKGRLALMDLALQRLAIDLLAE---RGYTP 194

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           +  P ++++  ++       +   M+ +        D     L   +     A++   + 
Sbjct: 195 VMPPYMMNRAAYEGVTDLSDFENVMYKI--------DGEDEFLIATSEHPMAAMYMDEIF 246

Query: 354 SYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
             ++LP+RLA   + +R E         GL RV  F + +  ++C +E  +    ++   
Sbjct: 247 EEKDLPLRLAGISTCFRREIGSHGLDTKGLFRVHQFNKVEQFIYCKQEDSWRLHEELLKN 306

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENIMKGVL 452
              I++       +V + T     V        +W   E   + V+
Sbjct: 307 AEDIFRMLKLPYHVVNICTGDIGTVAAKKYDIEVWMPREETYREVV 352


>gi|317402141|gb|EFV82733.1| SerS protein [Achromobacter xylosoxidans C54]
          Length = 448

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 41/233 (17%), Positives = 80/233 (34%), Gaps = 24/233 (10%)

Query: 242 EKRDHRKLAREMDL-FHIAEDGSGVIF-WHRKG--WKIFQTLISYMRRKIK--DDYEEIN 295
           E RDH  L   + L F  A   SG  F +  +G   ++ + L  +M         Y E  
Sbjct: 143 EARDHVALGEPLGLDFDTAAKLSGARFSFM-RGPIARLHRALAQFMLDLQTGTHGYTECY 201

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKP----------MNCPGHV 345
           TP +++      +G    ++ +MFAV               KP           +     
Sbjct: 202 TPYIVNASTLYGTGQLPKFKDDMFAVSKGGGDDDPKVDEHGKPFVREDQYLISTSEITLT 261

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFN 402
           +V    +++  +LP++L      +R+E         G++R   F + +       +Q + 
Sbjct: 262 SVVRDTIQAAADLPLKLTAHTPCFRSEAGSGGRDTRGMIRQHQFDKVEMVQVTQPDQSYE 321

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
               +      + +  G    ++ L T              +W  A+N  + +
Sbjct: 322 ALEGMVGHAERVLQLLGLPYRVMLLCTGDMGFGSAKTYDLEVWLPAQNTWREI 374


>gi|283768204|ref|ZP_06341117.1| phosphoribulokinase/uridine kinase family protein [Bulleidia
           extructa W1219]
 gi|283105081|gb|EFC06452.1| phosphoribulokinase/uridine kinase family protein [Bulleidia
           extructa W1219]
          Length = 548

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 40/214 (18%), Positives = 74/214 (34%), Gaps = 5/214 (2%)

Query: 28  ESISRSLAKKAVAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQS 87
           + I ++     VA     +   + D +  GSIE++         +++ S A +   AV  
Sbjct: 28  KKIQKNCCYPLVAAMEGYQFLLMEDQISGGSIELLDMRSSIGNRMVQRSLAFLYRYAVHE 87

Query: 88  IWP-EVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKA 146
           +   E +V I   I  G +      Q  + + + +IEKKM++      P  ++ L   + 
Sbjct: 88  VLGYETKVVIANAISKGVFTKVKSNQ-INKETIIKIEKKMKDC---HLPIFQRRLRRNEL 143

Query: 147 RELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGA 206
            +     +    + +LES P  E       G    +   P V  T  +  F   +  +G 
Sbjct: 144 IQWAREYELKESLVLLESNPILEMGYACEIGREKHVFFEPLVVHTSLLPIFACRLYRSGI 203

Query: 207 YWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
             R  +              T  E        E+
Sbjct: 204 LLRYPTPDEPDVLPAFEEEPTLYEAFSQETQWEK 237


>gi|313665727|ref|YP_004047598.1| serine--tRNA ligase [Mycoplasma leachii PG50]
 gi|312949962|gb|ADR24558.1| serine--tRNA ligase [Mycoplasma leachii PG50]
          Length = 422

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 86/234 (36%), Gaps = 22/234 (9%)

Query: 220 IYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKI 275
            +G +     E+ +  +         H ++A ++ L    +     GS  + +   G K+
Sbjct: 117 YFGKSDEDNVEIRKSNHSNLLKHSTPHWQIATKLGLVDFEKGVKLSGSRFLIYTGLGSKL 176

Query: 276 FQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
            +++   + +R  K  Y+EI  P ++++ +   +G    +  +M+ V            +
Sbjct: 177 VRSIADVLLKRHEKHGYKEIFCPLIVNKSVMLGTGQLPKFSEDMYQV---------GEQY 227

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDA 391
            + P +      +  + + +Y  LP++   F   +R E   +     G++R+  F + + 
Sbjct: 228 LI-PTSEVPLTNLHANEILTYDVLPLKYTSFTQCFRQEAGSAGRDTKGMIRLHQFNKVEL 286

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALW 441
                 E+  NE   +      +   F     +V+L +              +W
Sbjct: 287 VKIVHPEESMNELEMLIKDAEDVLNMFDLPYRVVELCSGDIGFSSAKTYDLEVW 340


>gi|153939104|ref|YP_001389385.1| seryl-tRNA synthetase [Clostridium botulinum F str. Langeland]
 gi|166219867|sp|A7G9C5|SYS_CLOBL RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|152935000|gb|ABS40498.1| serine--tRNA ligase [Clostridium botulinum F str. Langeland]
 gi|295317492|gb|ADF97869.1| serine--tRNA ligase [Clostridium botulinum F str. 230613]
          Length = 426

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 85/236 (36%), Gaps = 22/236 (9%)

Query: 220 IYGTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWK 274
             G       E+  +L   +   E + H  +   +++          GS   F+   G +
Sbjct: 115 PDGETDEDNIEIRNWLEPTKFYFEPKAHWDIGTNLNILDFERAGKVTGSRFTFYKGLGAR 174

Query: 275 IFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           + + +ISY      +   Y EI  P ++++     +G    +  + F +   D       
Sbjct: 175 LERAVISYFLDTHTEKHGYTEILPPYMVNRTSMIGTGQLPKFEEDAFKISEDD------- 227

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQD 389
            + L P        ++   +    ELP++   + + +R+E   +     GL+R   F + 
Sbjct: 228 -YFLIPTAEVPVTNLYRDEILKGDELPLKHVAYSACFRSEAGSAGRDTRGLVRQHQFNKV 286

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALW 441
           +   F   EQ + E  K+ N   ++ K+ G    +V++                +W
Sbjct: 287 ELVKFTKPEQSYEELEKLTNDAETVLKELGIPYRVVRICKGDLGFTAALKYDLEVW 342


>gi|18977576|ref|NP_578933.1| seryl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
 gi|30173185|sp|Q8U1K2|SYS_PYRFU RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|18893291|gb|AAL81328.1| seryl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
          Length = 455

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 44/354 (12%), Positives = 114/354 (32%), Gaps = 19/354 (5%)

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            +E  +  K++  +    +    +    +KA E  E      K  +      ++ V   R
Sbjct: 37  DEEWRKKLKEINRLRHERNKIAIEIGKRKKAGEPVEDLLAKSKEIVKRIEELEKEVEELR 96

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
           +   + L R P++          +   V   +W     +     +      +Q ++   +
Sbjct: 97  KRIDYYLWRLPNITHPSVPVGKDENDNVPIRFWGK--AKVWKGHLESFLEQSQGKMEYEV 154

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQT-LISY-MRRKIKDDYEE 293
                    D  ++    D    A+      ++      I    LI + + R I+  +  
Sbjct: 155 LEWRPKLHVDLLEILGGADFARAAKVSGSRFYYLLNEIVILDLALIRFALDRLIEKGFTP 214

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           +  P ++ + + + S  ++ +   ++ V        +     L P        +  + + 
Sbjct: 215 VIPPYMVRRFVEEGSTTFEDFEDVIYKV--------EGEDLYLIPTAEHPLAGMHANEIL 266

Query: 354 SYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
             ++LP+    F   +R E   +     G+ RV  F + +  V+   E+ +    ++   
Sbjct: 267 DGKDLPLLYVAFSPCFRKEAGTAGKDTKGIFRVHQFHKVEQFVYSRPEESWEWHERLVRN 326

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENIMKGVLDTIKNSSQ 460
              ++++      +V + T     V         W   +   + V+     +  
Sbjct: 327 AEELFQELEIPYRVVNICTGDLGYVAAKKYDIEAWMPGQGRFREVVSASNCTDW 380


>gi|291550263|emb|CBL26525.1| alanyl-tRNA synthetase [Ruminococcus torques L2-14]
          Length = 879

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 55/137 (40%), Gaps = 8/137 (5%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFS 115
            ++ +      R+L    HS  H++ +A++++        G  +  D   +DF      +
Sbjct: 548 DAVTLEVDAKNRALTERNHSATHLLQKALRTVLGSHVEQAGSFVNADRLRFDFTHFSAVT 607

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            +EL ++E+ + E IA     + + L  E+AR+         K   +  +          
Sbjct: 608 PEELKKVEEIVNEQIANALAVVTKNLPIEEARKTGAQALFGEKYGDVVRVVD-------M 660

Query: 176 QGEWFDLCRGPHVRSTG 192
            G   + C G HV++T 
Sbjct: 661 SGFSVEFCGGTHVKNTS 677


>gi|241895222|ref|ZP_04782518.1| seryl-tRNA synthetase [Weissella paramesenteroides ATCC 33313]
 gi|241871528|gb|EER75279.1| seryl-tRNA synthetase [Weissella paramesenteroides ATCC 33313]
          Length = 427

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 65/188 (34%), Gaps = 15/188 (7%)

Query: 272 GWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G ++ + + ++M     K+ Y+E+ TP ++       +G +  +  + + V   D     
Sbjct: 170 GARLERAVYNFMLDEHQKEGYKEMITPYLVKDEAMYGTGQYPKFMDDAYRVGTND----- 224

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFT 387
                L P         F   +    +LP  +      +R E   +     GL+R+  F 
Sbjct: 225 --EMTLIPTAEVPLTNYFREEVIDADKLPYSVTALSPAFRQEAGSAGRDTRGLIRMHQFN 282

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +   F   E  +     +     ++ K       ++ LST              +W  
Sbjct: 283 KVEMVKFTKPEDSYQALEDMTVNAENLLKKLNLPYHVITLSTGDMGFSAAKTYDVEVWMP 342

Query: 444 AENIMKGV 451
            +NI + +
Sbjct: 343 QQNIYREI 350


>gi|237750627|ref|ZP_04581107.1| seryl-tRNA synthetase [Helicobacter bilis ATCC 43879]
 gi|229373717|gb|EEO24108.1| seryl-tRNA synthetase [Helicobacter bilis ATCC 43879]
          Length = 431

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 72/193 (37%), Gaps = 14/193 (7%)

Query: 273 WKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
            ++   LISYM     K+ +E  + P ++++     +G    +  +MF ++  +D I + 
Sbjct: 174 ARLNHALISYMLDFNYKNGFEVCSVPVIVNERAMFGTGQLPKFADDMFHIESMNDDINES 233

Query: 332 RTFALKP------MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMR 382
                         +      ++   + +  ELP+ +  +   +R E   +     G++R
Sbjct: 234 EDSNKGHNLYLISTSEISLTNLYQDMILAENELPIMMTAYTPCFRKEAGSAGRDTRGIIR 293

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG----SD 438
              F + +     T EQ  +   ++ + +  + +       +V+L +             
Sbjct: 294 QHQFDKVELVAITTPEQSESMQQRMVDNVSKLLESLELPHRLVQLCSGDIGFSATNTIDL 353

Query: 439 ALWDDAENIMKGV 451
            +W   +N  + +
Sbjct: 354 EVWLPGQNCYREI 366


>gi|254431552|ref|ZP_05045255.1| histidyl-tRNA synthetase [Cyanobium sp. PCC 7001]
 gi|197626005|gb|EDY38564.1| histidyl-tRNA synthetase [Cyanobium sp. PCC 7001]
          Length = 421

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/114 (18%), Positives = 45/114 (39%), Gaps = 2/114 (1%)

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
           +ER + ++++         ++P    V +    A   A  +A L +   L +E D     
Sbjct: 307 MERLV-LLLQRSAEAASASVAPPDLYVVSRGVQAEALALPLARLCRQAGLVVEIDPSGAA 365

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRR-FGSTTTQKVSLLDAIPILTK 643
            + + R       P   + GD+EA+   + +R   G    +++S    +  L +
Sbjct: 366 FSKQFRRADRSGAPHAAVIGDEEAAAGVVILRELRGDGADRRLSPEQLLAALRE 419


>gi|170758241|ref|YP_001787882.1| alanyl-tRNA synthetase [Clostridium botulinum A3 str. Loch Maree]
 gi|205830034|sp|B1KXB7|SYA_CLOBM RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|169405230|gb|ACA53641.1| alanine--tRNA ligase [Clostridium botulinum A3 str. Loch Maree]
          Length = 879

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/172 (22%), Positives = 74/172 (43%), Gaps = 23/172 (13%)

Query: 35  AKKAVAVAI-------NGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQS 87
            KK ++  I       +GKV        E  + +   E  R+     H+  HI+  A+  
Sbjct: 525 CKKNISGKILHFVKILDGKVA------LEDQVILKVNEGRRNNIRKNHTATHILHAALIK 578

Query: 88  IWPEVQVAIGPIIEDG-FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKA 146
           +  +     G  ++D    +DF   +  S DEL ++EK + + I + +    + ++ E+A
Sbjct: 579 VVGDHVQQSGSYVDDERLRFDFSHFEAVSEDELKEVEKIVNKEIMKANAVNTKVMNIEEA 638

Query: 147 RELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
           ++             L     K++V +   G++  +LC G HV ++GQ+  F
Sbjct: 639 KQ--------QGAIALFDNKYKDDVRVVSVGDFSKELCGGTHVSNSGQIGMF 682


>gi|73959363|ref|XP_866242.1| PREDICTED: similar to seryl-tRNA synthetase isoform 5 [Canis
           familiaris]
          Length = 465

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/159 (16%), Positives = 54/159 (33%), Gaps = 9/159 (5%)

Query: 275 IFQTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           + Q LI Y +R      Y  I TP  + + + Q+      +   ++ V        D  +
Sbjct: 154 LEQALIQYALRTLGSRGYTPIYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGSEKSDDNS 213

Query: 334 FALKP---MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFT 387
           +  K     +     A+         +LP++ A   + +R E         G+ RV  F 
Sbjct: 214 YDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGRDTRGIFRVHQFE 273

Query: 388 QDDAHVFCTKEQ--MFNECLKIHNLIISIYKDFGFEKIM 424
           + +  V+ +      +    ++       Y+  G    +
Sbjct: 274 KIEQFVYSSPHDNKSWEMFEEMITTAEDFYQSLGIPYHI 312


>gi|332878894|ref|ZP_08446609.1| serine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str. F0087]
 gi|332683245|gb|EGJ56127.1| serine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str. F0087]
          Length = 423

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/253 (14%), Positives = 80/253 (31%), Gaps = 23/253 (9%)

Query: 207 YWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKR-DHRKLAREMDLFHIAE----D 261
           Y   +    ++    GT+      + +        +    H +LA++ DL          
Sbjct: 105 YRVPNIPNDLVPE--GTSEADNVVVFEAGEIPNLGKDALPHWELAKKYDLIDFELGVKLT 162

Query: 262 GSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA 320
           G+G   +  KG K+ + LI+Y + +  +  Y E   P V+++           Y      
Sbjct: 163 GAGFPVYKGKGAKLQRALITYFLDKNTEAGYNEYQVPHVVNE--------ASGYGTGQLP 214

Query: 321 VKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG---SL 377
            K        +    L P        +F   L +  +LP+    +   +R E       +
Sbjct: 215 DKEGQMYHVGVDNLYLIPTAEVPVTNIFRDTLLNESDLPICCTAYTPCFRREAGSYGAHV 274

Query: 378 HGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR--- 434
            GL R+  F + +       +  +     +   +  I  +      +++L          
Sbjct: 275 RGLNRLHQFDKVEIVRIEHPDHSYKALEGMIEHVKGILNELKLPYHILRLCGGDLGFTSA 334

Query: 435 -VGSDALWDDAEN 446
                 ++  A+ 
Sbjct: 335 ITYDFEVYSTAQE 347


>gi|72135958|ref|XP_793542.1| PREDICTED: similar to Seryl-aminoacyl-tRNA synthetase 1
           [Strongylocentrotus purpuratus]
 gi|115976015|ref|XP_001188820.1| PREDICTED: similar to Seryl-aminoacyl-tRNA synthetase 1
           [Strongylocentrotus purpuratus]
          Length = 526

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/227 (13%), Positives = 71/227 (31%), Gaps = 19/227 (8%)

Query: 214 RPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVI-----FW 268
             +   +  +    +  + +        +K  H  L     +  +  +   V+     ++
Sbjct: 141 NLLHDSVRVSNDEDENVIERMHGDCTVRKKYSHVDLI--HMIDGMEAERGTVVAGNRGYF 198

Query: 269 HRKGWKIFQTL---ISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD 325
             KG  +F +L      +R      Y  + TP  + + + Q+      +   ++ V    
Sbjct: 199 L-KGAAVFLSLAVQQHALRILTSRGYTPLYTPFFMRKEIMQEVAQLSQFDDELYKVVGKG 257

Query: 326 DTIKDLRTFALKP---MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHG 379
               +  T   K     +     A   +   S  ELP + A F + +R E         G
Sbjct: 258 SEKSEENTIEEKYLIATSEQPIAAFHRNEWMSPSELPKKYAGFSTCFRQEVGSHGRDTRG 317

Query: 380 LMRVRGFTQDDAHVFCTK--EQMFNECLKIHNLIISIYKDFGFEKIM 424
           + RV  F + +   F +      +    ++ +      +  G    +
Sbjct: 318 IFRVHQFEKIEQFCFASPKDNMSWLLFDEMMDNAEKFCQSLGIPYRI 364


>gi|294792102|ref|ZP_06757250.1| alanine--tRNA ligase [Veillonella sp. 6_1_27]
 gi|294457332|gb|EFG25694.1| alanine--tRNA ligase [Veillonella sp. 6_1_27]
          Length = 871

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/147 (19%), Positives = 55/147 (37%), Gaps = 8/147 (5%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFS 115
             + +    + R+     H+  H++  A++ +  E     G  +  D   +DF    P +
Sbjct: 538 DDVTLEVDTNRRAAMARNHTATHLLHAALKKVLGEHVNQAGSLVTPDYLRFDFTHFSPVT 597

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            +EL QIE  + E I + +      +S ++A+          K   +  +          
Sbjct: 598 QEELDQIEALVNEEILKATDLAIAEMSMDEAKAKGAMALFGDKYGDVVRVVEVP------ 651

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLMK 202
            G   +LC G HV +T  +  F    +
Sbjct: 652 -GFSVELCGGSHVGNTAFISSFRLTSE 677


>gi|323525163|ref|YP_004227316.1| seryl-tRNA synthetase [Burkholderia sp. CCGE1001]
 gi|323382165|gb|ADX54256.1| seryl-tRNA synthetase [Burkholderia sp. CCGE1001]
          Length = 431

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/243 (15%), Positives = 81/243 (33%), Gaps = 15/243 (6%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDL-FHIAEDGSGVIFWHRKG--WKIFQ 277
           G       E+ ++    +   E +DH  +   + L F      SG  F   +G   ++ +
Sbjct: 114 GRDEADNVEVRRWGTPRQFDFEVKDHVDVGAPLGLDFETGAKLSGARFTMLRGQIARLHR 173

Query: 278 TLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFA 335
            L  +M      +  Y EI TP +++  +   +G    +  +MF V+         +   
Sbjct: 174 ALAQFMIDTHTQQHGYTEIYTPYIVNPEILYGTGQLPKFADDMFRVEKGGGENTVTQYLI 233

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAH 392
               +           +     LP++L      +R+E         G++R   F + +  
Sbjct: 234 S--TSEISLTNTVRESIVEANALPIKLTAHSPCFRSEAGSYGRDTRGMIRQHQFDKVEMV 291

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIM 448
                E  ++   ++     +I +       ++ L T              +W  A+N  
Sbjct: 292 QIVAPETSYDALEQMVGHAETILQKLELPYRVITLCTGDMGFSATKTYDLEVWLPAQNTY 351

Query: 449 KGV 451
           + +
Sbjct: 352 REI 354


>gi|253698745|ref|YP_003019934.1| seryl-tRNA synthetase [Geobacter sp. M21]
 gi|259511671|sp|C6E7Z3|SYS_GEOSM RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|251773595|gb|ACT16176.1| seryl-tRNA synthetase [Geobacter sp. M21]
          Length = 422

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 68/189 (35%), Gaps = 17/189 (8%)

Query: 272 GWKIFQTLISYMRRKIKDD--YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
           G ++ + LI+YM     D+  Y E+  P ++++     +G    +  ++F ++  D    
Sbjct: 168 GARLERALINYMLDLHIDEHKYIEMLPPFMVNRECMTGTGQLPKFEEDLFHMEGVD---- 223

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGF 386
               F L P        +    +    +LP+    +   +R E         GL+R   F
Sbjct: 224 ----FFLIPTAEVPVTNIHRGEILKGSDLPISYVAYTPCFRKEAGSYGKDTRGLIRQHQF 279

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG----SDALWD 442
            + +   F + E  + +  K+      + +       +V+L T              +W 
Sbjct: 280 NKVELVKFTSPEDSYEQLQKLLGHAEEVLRRLQIPYRVVELCTGDIGFSAAKTFDIEVWL 339

Query: 443 DAENIMKGV 451
             +N  + +
Sbjct: 340 PGQNCYREI 348


>gi|152976803|ref|YP_001376320.1| alanyl-tRNA synthetase [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|205829984|sp|A7GT67|SYA_BACCN RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|152025555|gb|ABS23325.1| alanyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98]
          Length = 880

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/145 (20%), Positives = 61/145 (42%), Gaps = 10/145 (6%)

Query: 55  REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQP 113
           ++ +++ +     RS  V  H+  H++ +A++ +        G  +  +   +DF     
Sbjct: 547 KDATVKAVIDTKNRSSIVKNHTATHLLHQALKDVLGTHVNQAGSLVTAERLRFDFSHFGQ 606

Query: 114 FSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTL 173
             +DEL +IE+ + E I           + E+A+E+        K          + V +
Sbjct: 607 VQADELEKIERIVNEKIWESIDVEISQKAIEEAKEMGAMALFGEKY--------GDVVRV 658

Query: 174 YRQGEW-FDLCRGPHVRSTGQVKKF 197
            + G++  +LC G HV +T  +  F
Sbjct: 659 VQVGDYSLELCGGCHVDNTASIGIF 683


>gi|329770181|ref|ZP_08261572.1| seryl-tRNA synthetase [Gemella sanguinis M325]
 gi|328837082|gb|EGF86724.1| seryl-tRNA synthetase [Gemella sanguinis M325]
          Length = 426

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 40/223 (17%), Positives = 83/223 (37%), Gaps = 21/223 (9%)

Query: 242 EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRRKI--KDDYEEIN 295
           E + H  L  E+D+          GS  +F+ + G  + + LI++M      +  YEE  
Sbjct: 136 EPKAHWDLVEELDIADFERAAKISGSRFVFYKKAGALLERALINFMLDIHVTEHGYEEYM 195

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
            PQ++++     +G +  +  +++ V+    T+         P         +N  + S 
Sbjct: 196 VPQLVNRTALFGTGQFPKFVEDVYTVESEGLTLI--------PTAEVPLTNYYNDEILSE 247

Query: 356 RELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
             LP  +  F   +R+E   +     GL+R+  F + +   F   E  + +   +     
Sbjct: 248 DMLPKGVTAFSICFRSEAGSAGRDTRGLIRLHQFNKVEMVRFSKPENSYEQLEIMTGHAE 307

Query: 413 SIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
           +I K       ++ L +              +W  + N  K +
Sbjct: 308 NILKKLNLPYRVITLCSGDTGFSSAKTYDIEVWLPSYNAYKEI 350


>gi|303230862|ref|ZP_07317609.1| alanine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
 gi|302514622|gb|EFL56617.1| alanine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
          Length = 872

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/162 (20%), Positives = 61/162 (37%), Gaps = 11/162 (6%)

Query: 45  GKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIED 102
           G V + S  + EG  + +      R+     H+  H++  A++ +  E     G  +  D
Sbjct: 527 GTVVEGS--ISEGDDVTLEVDTARRAAMARNHTATHLLHAALKRVLGEHVNQAGSLVTPD 584

Query: 103 GFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL 162
              +DF    P + +EL QIE  + E I + +      +S ++A+          K   +
Sbjct: 585 YLRFDFTHFSPVTQEELDQIEALVNEEILKATDLAIAEMSMDEAKAKGAMALFGDKYGDV 644

Query: 163 ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVA 204
             +           G   +LC G HV +T  +  F    +  
Sbjct: 645 VRVVEVP-------GFSVELCGGSHVGNTAFISSFRLTSESG 679


>gi|303245636|ref|ZP_07331919.1| alanyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
 gi|302492899|gb|EFL52764.1| alanyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
          Length = 880

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/131 (22%), Positives = 53/131 (40%), Gaps = 8/131 (6%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDELAQIEKKM 126
           R+     H+C H++ +A++++        G  +  D   +DF      + DEL+++E ++
Sbjct: 563 RAATARNHTCTHLLHKALKNVLGSHVNQAGSLVTPDRLRFDFTHIAAMTPDELSRVEDEV 622

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGP 186
              I  D+P   + L  E AR    +     K              +   G   + C G 
Sbjct: 623 NAAILLDAPVTTEVLPLEAARAKGATALFGEKY-------GDTVRVVEVPGVSMEFCGGT 675

Query: 187 HVRSTGQVKKF 197
           H+ +TGQ   F
Sbjct: 676 HLSATGQAGSF 686


>gi|300770263|ref|ZP_07080142.1| histidine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861]
 gi|300762739|gb|EFK59556.1| histidine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861]
          Length = 472

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 15/91 (16%), Positives = 44/91 (48%), Gaps = 1/91 (1%)

Query: 556 IVTTITSSAVE-YAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
           ++      ++E +   + N L+   +++E   +   +  ++     K+IP +++ G++E 
Sbjct: 373 LLIVNFDKSIEAFTLPLLNRLRQAGIAVELYPQAVKLKKQMSYADDKRIPYVLLIGEEEV 432

Query: 615 SERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
           +   + ++   S   QK+S  +   +L+K+ 
Sbjct: 433 NTGKLSLKNMKSGEQQKLSEQEITVLLSKQR 463


>gi|58584618|ref|YP_198191.1| alanyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of Brugia
           malayi]
 gi|75497910|sp|Q5GSS5|SYA_WOLTR RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|58418934|gb|AAW70949.1| Alanyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of Brugia
           malayi]
          Length = 875

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/151 (20%), Positives = 60/151 (39%), Gaps = 9/151 (5%)

Query: 55  REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQP 113
           ++  +   T ++ R      HS  H++  A++ I  +     G +I  D   +DF     
Sbjct: 560 KDDIVTASTDKERRQNLRRNHSATHLLHFALRKILGDHVTQKGSLIAPDRLRFDFSHNTQ 619

Query: 114 FSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTL 173
            + D+L+ IE  +  +I  +     +  S  +A        E      L      + V +
Sbjct: 620 VTRDQLSLIEDMVNSLIRENLSAFTKIQSMNQAI------GEGAMA--LFGKKYGDQVRV 671

Query: 174 YRQGEWFDLCRGPHVRSTGQVKKFFKLMKVA 204
              G+  +LC G HV  TG++  F  + + +
Sbjct: 672 VNIGDSKELCGGTHVERTGEIGLFKIITECS 702


>gi|15893319|ref|NP_346668.1| seryl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|30173201|sp|Q97N17|SYS1_CLOAB RecName: Full=Seryl-tRNA synthetase 1; AltName: Full=Serine--tRNA
           ligase 1; Short=SerRS 1; AltName:
           Full=Seryl-tRNA(Ser/Sec) synthetase 1
 gi|15022840|gb|AAK78008.1|AE007515_8 Seryl-tRNA synthetase (serine-tRNA ligase) [Clostridium
           acetobutylicum ATCC 824]
 gi|325507428|gb|ADZ19064.1| seryl-tRNA synthetase [Clostridium acetobutylicum EA 2018]
          Length = 424

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/236 (16%), Positives = 83/236 (35%), Gaps = 23/236 (9%)

Query: 220 IYGTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWK 274
             G +     E+ ++    +   E + H  +  ++ L          GS   F+   G +
Sbjct: 115 PEGKSDEENVEIRKWGEPRKFDFEFKAHWDIGTDLGLLDFERGGKVAGSRFTFYKGLGAR 174

Query: 275 IFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           + + +I+Y      +   Y EI  P ++++     +G    +          +D  K   
Sbjct: 175 LERAVINYFLDTHVEKHGYTEILPPYMVNRVSMTGTGQLPKF---------EEDAFKVDN 225

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQD 389
            F L P        +F   +    +LP + A + + +R+E   +     GL+R   F + 
Sbjct: 226 GFFLIPTAEVPVTNMFRDEILKAEDLPYKFAAYSACFRSEAGSAGRDTRGLVRQHQFNKV 285

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALW 441
           +   F   E+ ++E  K+ +    I +       +V++                +W
Sbjct: 286 ELVKFAKPEESYDELEKLTHDAEEILQILNIPYRVVRICKGDLGFTAALKYDIEVW 341


>gi|325280523|ref|YP_004253065.1| alanyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712]
 gi|324312332|gb|ADY32885.1| alanyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712]
          Length = 877

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/144 (22%), Positives = 60/144 (41%), Gaps = 10/144 (6%)

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSDELAQ 121
             E  R L    HS  H++  A++ +  +     G  + D    +DF   Q  + +ELA+
Sbjct: 551 VDEHKRVLTANNHSATHLLDYALRKVLGKHVEQKGSYVSDEHLRFDFSHFQKVTDEELAE 610

Query: 122 IEKKMQEIIARDSPFL-KQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           +   +  +I  + P    + +   KA+ +        K          + V + + GE  
Sbjct: 611 VAAIVNRLIRMNIPLEEHRSVPMAKAQAMGALAIFGEKY--------GDLVRVIKYGESV 662

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVA 204
           +LC G HV +TGQ+  F  L + +
Sbjct: 663 ELCGGTHVPATGQIGFFKILSESS 686


>gi|315142828|gb|ADT80989.1| glutamyl- and prolyl-tRNA synthetase [Myrmekiaphila torreya]
 gi|315142830|gb|ADT80990.1| glutamyl- and prolyl-tRNA synthetase [Myrmekiaphila torreya]
          Length = 148

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 52/143 (36%), Gaps = 19/143 (13%)

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           GA +    E  +  + GR  Q  T   +  N    F   + +  + +     +++  +G 
Sbjct: 9   GADFTTTVEAYVP-SNGRAIQGATSHHLGQNFSKMFEIVFEHPDTVEKQ--YVYQNSWGL 65

Query: 531 IERFIGIMIENFKGNLPLWL----SPIQAIVTTITSSA----------VEYAQEIANLLK 576
             R IG+ +     N  L L    +P Q ++     +A           E  + +   L+
Sbjct: 66  SSRSIGVAVMVHGDNAGLVLPPRVAPHQVVIVPCGVTANLSESEKKLLAEKCEALEKELR 125

Query: 577 SHHLSIETDFR-NETINYKIREH 598
              + ++ D+R N +  +K    
Sbjct: 126 EASIRVKGDYRENYSPGWKFNHW 148


>gi|304397062|ref|ZP_07378941.1| seryl-tRNA synthetase [Pantoea sp. aB]
 gi|304355211|gb|EFM19579.1| seryl-tRNA synthetase [Pantoea sp. aB]
          Length = 430

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 64/188 (34%), Gaps = 10/188 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M     +   Y E + P +++      +G    +  ++F  +  ++   D
Sbjct: 170 ARLHRALSQFMIDLHTEQHGYLETSVPYLVNHATLYGTGQLPKFGEDLFHTRPLEEE-SD 228

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
              +AL P        +    +     LPV+L      +R+E         GL+R+  F 
Sbjct: 229 SSNYALIPTAEVPLTNLVRDEILEEDTLPVKLTAHTPCFRSEAGSYGRDTRGLIRMHQFD 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +     T EQ      ++      + +        V L T              +W  
Sbjct: 289 KVEMVQIVTPEQSMEALEELTGHAEKVLQLLNLPYRKVLLCTGDMGFGATKTYDLEVWLP 348

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 349 AQNTYREI 356


>gi|302023321|ref|ZP_07248532.1| histidyl-tRNA synthetase [Streptococcus suis 05HAS68]
          Length = 405

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 61/418 (14%), Positives = 130/418 (31%), Gaps = 70/418 (16%)

Query: 279 LISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALK 337
           + ++ R    + +Y EI TP       ++          ++   +  D   K  R   L+
Sbjct: 1   MENFTRSIFKQYNYAEIRTPIF---EHYEVISRSVGDTTDIVTKEMYDFYDKGERHITLR 57

Query: 338 PMNCPGHVAVFNHGLKS-----YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
           P    G   V    +++       + P +    G ++R E   +     R+R F Q    
Sbjct: 58  P---EGTAPVVRSYVENKLFAPEVQKPAKFYYMGPMFRYERPQA----GRLRQFHQIGVE 110

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVK------LSTRPEKRVG--------SD 438
            F +        ++   +    +++ G + I +         +R   R           D
Sbjct: 111 CFGSNNPA--TDVETIAMAYHFFEELGIKDIRLHLNSLGNPESRAAYRQALIDYLTPLKD 168

Query: 439 ALWDDAENIMKG----VLDTIKNSSQDR-------INTGVLLGEGAFYGPKFEYILKDAI 487
            L  D++  ++     VLD+ +   +         ++         F   K    + D++
Sbjct: 169 QLSKDSQRRLEENPLRVLDSKEKEDKVAVENAPSILDYLDEESTAHFEAVK---TMLDSL 225

Query: 488 GRDWQCGTIQVDFNLPSRFNAFYVNSH------------------SEKCHPVMIHRAVFG 529
           G  +   T  V          F   +                   +    P         
Sbjct: 226 GIAYVIDTNMVRGLDYYNHTIFEFMTEVGGNDLTICAGGRYDGLVTYFGGPETPAFGFGM 285

Query: 530 SIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE 589
            IER I +++E     LPL  + +   +  +   A   A ++   ++      E D+ + 
Sbjct: 286 GIERLI-LVLEKQGIELPL-DTQLDVYIAVLGQEANGGALDLVQAIRKQGFRAERDYLDR 343

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL----DAIPILTK 643
            +  + +   +     II  G  E     + ++   + +  + SL     D   IL +
Sbjct: 344 KLKAQFKSADVFGAKAIITLGGSEIESGQVVVKNNQTRSQVETSLEALKTDFASILEE 401


>gi|212635388|ref|YP_002311913.1| seryl-tRNA synthetase [Shewanella piezotolerans WP3]
 gi|226701397|sp|B8CP82|SYS_SHEPW RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|212556872|gb|ACJ29326.1| Seryl-tRNA synthetase, class IIa [Shewanella piezotolerans WP3]
          Length = 428

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/223 (16%), Positives = 77/223 (34%), Gaps = 16/223 (7%)

Query: 242 EKRDHRKLAREMDL--FHIAEDGSGVIFWHRKG--WKIFQTLISYMRRKI--KDDYEEIN 295
           E +DH +L   +    F  A   +G  F   KG   ++ + L  +M      +  Y E  
Sbjct: 135 EVKDHVELGETLGGLDFKNAVKLTGSRFIIMKGQIARMHRALAQFMLDLHTTEHGYTEAY 194

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
            P ++++     +G    +  ++F  K A    ++ +  +L P        +    +   
Sbjct: 195 VPLLVNEDSLLGTGQLPKFGEDLFHTKPA---TEEGQGLSLIPTAEVPLTNIARDSIIDE 251

Query: 356 RELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
            +LPV +      +R+E         GL+R   F + +       E       ++     
Sbjct: 252 DDLPVMMTAHTPCFRSEAGSYGRDTRGLIRQHQFDKVELVQLVKPEDSMQALEELTGHAE 311

Query: 413 SIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
           ++ +  G     V L T              +W  A++  + +
Sbjct: 312 TVLQKLGLPYRTVVLCTGDMGFGAAKTFDIEVWLPAQDTFREI 354


>gi|152977739|ref|YP_001343368.1| alanyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
 gi|205829971|sp|A6VKD6|SYA_ACTSZ RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|150839462|gb|ABR73433.1| alanyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
          Length = 874

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 52/122 (42%), Gaps = 10/122 (8%)

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIED-GFYYDFDKEQPFSSDELAQIEKKMQEIIA 131
           + HS  H++  A++ +  E     G ++ D G  +DF + +  + +++ +IE+ +   I 
Sbjct: 561 LNHSATHLLHAALRQVLGEHVAQKGSLVSDVGLRFDFVQPEAVTKEQIMEIERLVNFHIR 620

Query: 132 RDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRS 190
            + P L + +   +A+          K          E V +     +  +LC G HV  
Sbjct: 621 ANHPVLTEEMGVAEAKSKGAIALFGEKY--------GETVRVVTMSPFSIELCGGLHVER 672

Query: 191 TG 192
           TG
Sbjct: 673 TG 674


>gi|119576769|gb|EAW56365.1| seryl-tRNA synthetase, isoform CRA_a [Homo sapiens]
          Length = 466

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/159 (16%), Positives = 54/159 (33%), Gaps = 9/159 (5%)

Query: 275 IFQTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           + Q LI Y +R      Y  I TP  + + + Q+      +   ++ V        D  +
Sbjct: 155 LEQALIQYALRTLGSRGYIPIYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGSEKSDDNS 214

Query: 334 FALKP---MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFT 387
           +  K     +     A+         +LP++ A   + +R E         G+ RV  F 
Sbjct: 215 YDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGRDTRGIFRVHQFE 274

Query: 388 QDDAHVFCTKEQ--MFNECLKIHNLIISIYKDFGFEKIM 424
           + +  V+ +      +    ++       Y+  G    +
Sbjct: 275 KIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHI 313


>gi|328958438|ref|YP_004375824.1| serine--tRNA ligase [Carnobacterium sp. 17-4]
 gi|328674762|gb|AEB30808.1| serine--tRNA ligase [Carnobacterium sp. 17-4]
          Length = 423

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 85/246 (34%), Gaps = 21/246 (8%)

Query: 219 RIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI----AEDGSGVIFWHRKGWK 274
            I       ++          E E   H +L   + +          G   +++   G +
Sbjct: 113 PIGNDEQENEEIRVNGEKKKFEFEVLPHYELGENLGILDFVRGSKVAGKRFVYYKGLGAR 172

Query: 275 IFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           + + + ++M         Y E+  P ++ +     +G +  ++ ++F++        +  
Sbjct: 173 LERAVYNFMLDLHTRKHGYTEVIPPYLVKESAMFGTGQFPKFKEDVFSI--------ENE 224

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQD 389
              L P         + + +  Y +LP+        +R+E   +     GL+R+  F + 
Sbjct: 225 NLVLIPTAEVPLTNYYANEIIEYEKLPIYFTALSPSFRSEAGSAGRDTRGLIRMHQFHKV 284

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAE 445
           +   F  KE  F+E  K+ +    + +        + LST              +W  ++
Sbjct: 285 EMVKFTDKESSFDELEKMTHDAEEVLQLLEIPYKTIVLSTGDMGFSATKTYDIEVWFPSQ 344

Query: 446 NIMKGV 451
           +  + +
Sbjct: 345 DTYREI 350


>gi|294625158|ref|ZP_06703801.1| seryl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii str.
           ICPB 11122]
 gi|292600530|gb|EFF44624.1| seryl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii str.
           ICPB 11122]
          Length = 426

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 64/188 (34%), Gaps = 15/188 (7%)

Query: 273 WKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M      +  YEE N P +++    + +G    +  ++F        + +
Sbjct: 171 ARLHRALAQFMLDLHVGEHGYEETNVPLLVNADSMRGTGQLPKFEDDLFQT-----DVGE 225

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
            R + + P +      +    +     LP+R+      +R E         G++R   F 
Sbjct: 226 SRRYLI-PTSEVPLTNIVREEIIDAERLPLRMTAHSMCFRAEAGSGGRDTRGMIRQHQFE 284

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +    C  E    E  ++      + +  G     V L T              +W  
Sbjct: 285 KVELVTACAPEDSDAEHQRMTRCAEVVLEQLGLPYRKVLLCTGDMGFSAIKTYDLEVWLP 344

Query: 444 AENIMKGV 451
           ++N  + +
Sbjct: 345 SQNTYREI 352


>gi|254450715|ref|ZP_05064152.1| alanyl-tRNA synthetase [Octadecabacter antarcticus 238]
 gi|198265121|gb|EDY89391.1| alanyl-tRNA synthetase [Octadecabacter antarcticus 238]
          Length = 884

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/148 (20%), Positives = 58/148 (39%), Gaps = 5/148 (3%)

Query: 60  EIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDE 118
           E++     R+     HS  H++ EA++    +  V  G     D   +DF      +S E
Sbjct: 547 ELVVDPARRAAIRANHSATHLLNEALRVALGDHVVQRGSLNAADRLRFDFTHTGAMTSAE 606

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYK----VEILESIPAKENVTLY 174
           L Q+E+ +   + +++    + ++ + AR +        K    V ++    AK      
Sbjct: 607 LTQVEQDVNRYVQQNTAVSTRIMTPDDARAIGAQALFGEKYGDEVRVVSMGRAKTGKGAE 666

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMK 202
                 +LC G HV  TG +  F    +
Sbjct: 667 GLTYSLELCGGTHVARTGDIGMFALTSE 694


>gi|187251906|ref|YP_001876388.1| seryl-tRNA synthetase [Elusimicrobium minutum Pei191]
 gi|238065101|sp|B2KEV5|SYS_ELUMP RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|186972066|gb|ACC99051.1| Seryl-tRNA synthetase [Elusimicrobium minutum Pei191]
          Length = 424

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 44/222 (19%), Positives = 83/222 (37%), Gaps = 19/222 (8%)

Query: 242 EKRDHRKLAREMDL--FHIAEDGSGVIFWHRKG--WKIFQTLISYM-RRKIKDDYEEINT 296
           +  DH  +  ++ +  F  A   SG  F   KG   ++ + LISYM  +  K  Y E+  
Sbjct: 138 KPLDHHAVGEKLGILDFETAAVLSGSRFALLKGDGARLERALISYMLDKHAKKGYTEVVP 197

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P ++++ +   +G    +R +M+A++       + + F +          +    +    
Sbjct: 198 PSIVNEEILIGTGQLPKFREDMYALE------GEPKQFLIS-TAEIPLTNMNRGKVLQEA 250

Query: 357 ELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           ELPV+L      +R E         GL+R   F + +  +       FN    +      
Sbjct: 251 ELPVKLTAGTPCFRKEAGTYGKDTRGLIRNHQFDKVELVMISNSNDSFNLLEAMTADAED 310

Query: 414 IYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
           + K  G     V+L T              +W  +EN  + +
Sbjct: 311 VLKGLGLAYRTVELCTGDMGFSSAKTYDIEVWMPSENKYREI 352


>gi|325144845|gb|EGC67133.1| alanyl-tRNA synthetase [Neisseria meningitidis M01-240013]
          Length = 874

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 61/143 (42%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFS 115
            S+     ++ R+  +  HS  H+M +A++ +        G  +  +   +D    Q  +
Sbjct: 544 DSVTAKVDDEIRNANMRNHSATHLMHKALRDVLGRHVEQKGSLVTTESTRFDISHPQAVT 603

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           ++E+A++E+++ E +  +       +S E A++         K          + V + +
Sbjct: 604 AEEIAEVERRVNEAVLANVAVNAAIMSMEDAQKTGAMMLFGEKY--------GDEVRVLQ 655

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G +  +LC G HV  TG +  F
Sbjct: 656 MGGFSTELCGGTHVSRTGDIGLF 678


>gi|303229350|ref|ZP_07316140.1| alanine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
 gi|302515886|gb|EFL57838.1| alanine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
          Length = 872

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/162 (20%), Positives = 61/162 (37%), Gaps = 11/162 (6%)

Query: 45  GKVCDLSDPVREGS-IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIED 102
           G V + S  + EG  + +      R+     H+  H++  A++ +  E     G  +  D
Sbjct: 527 GTVVEGS--ISEGDDVTLEVDTARRAAMARNHTATHLLHAALKRVLGEHVNQAGSLVTPD 584

Query: 103 GFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEIL 162
              +DF    P + +EL QIE  + E I + +      +S ++A+          K   +
Sbjct: 585 YLRFDFTHFSPVTQEELDQIEALVNEEILKATDLAIAEMSMDEAKAKGAMALFGDKYGDV 644

Query: 163 ESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVA 204
             +           G   +LC G HV +T  +  F    +  
Sbjct: 645 VRVVEVP-------GFSVELCGGSHVGNTAFISSFRLTSESG 679


>gi|257065307|ref|YP_003144979.1| seryl-tRNA synthetase [Slackia heliotrinireducens DSM 20476]
 gi|256792960|gb|ACV23630.1| seryl-tRNA synthetase [Slackia heliotrinireducens DSM 20476]
          Length = 428

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 66/189 (34%), Gaps = 17/189 (8%)

Query: 271 KGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
            G ++ + LI++M        Y+E   P + + +    +G    +  ++F          
Sbjct: 170 LGARLERALINFMADTHGSRGYKEWWCPVMANGNTLYGTGQLPKFEEDLFHTT------- 222

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGF 386
                 L P        +    +    +LP++   + + +R E   +     GL+RV  F
Sbjct: 223 --EGLYLIPTAEVQLTNIHAGDVLEASQLPLKYCGYTACFREEAGSAGRDTRGLIRVHQF 280

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWD 442
            + +   F T E  FN+   +     +I +  G    ++ L T              +W 
Sbjct: 281 DKVEMVKFATPEDGFNQLELMVEDAENILQLLGLPYRVISLCTGDLGFSAAKTYDLEVWL 340

Query: 443 DAENIMKGV 451
            + +  K +
Sbjct: 341 PSYDAYKEI 349


>gi|171686512|ref|XP_001908197.1| hypothetical protein [Podospora anserina S mat+]
 gi|170943217|emb|CAP68870.1| unnamed protein product [Podospora anserina S mat+]
          Length = 734

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 13/99 (13%), Positives = 38/99 (38%), Gaps = 2/99 (2%)

Query: 546 LPLWLSPIQAIVTTITS--SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
            P  ++P + ++  ++S        ++++  L+S  +S   D  + +I  +   +     
Sbjct: 606 FPPAVAPTKVLIVPLSSNKDFTPEVRKLSQKLRSAGVSSRIDDSSASIGKRYSRNDELGT 665

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           P  +    +   + ++ +R   ST   +      I  + 
Sbjct: 666 PFGVTVDFQTLKDGTVTLRERDSTRQVRAEEDKIIAAIK 704



 Score = 41.3 bits (95), Expect = 0.49,   Method: Composition-based stats.
 Identities = 42/261 (16%), Positives = 81/261 (31%), Gaps = 25/261 (9%)

Query: 335 ALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
            L+P    G    F   L+ +  ++P   A  G  YRNE S    GL+RVR F   +   
Sbjct: 286 YLRPETAQGQFLNFAKLLEFNTGQMPFASASIGKSYRNEISPR-AGLLRVREFLMAEIEH 344

Query: 394 FCTKEQM-----FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIM 448
           F   E       F+E   +    +  +       ++ K +     + G     +     +
Sbjct: 345 FVDPEGHKKHARFHEVADVELAFLDRHTQLSGSTVVKKQTIGQAVKEGLVDN-ETLGYFL 403

Query: 449 KGVLDTIKNSS--QDRINTG--VLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPS 504
             +L  +K     + +I     +      +    ++  L  + G   +C           
Sbjct: 404 ARILLFLKKIGIDEKKIRFRQHMDNEMAHYACDCWDAELHTSAG-WVECVG------CAD 456

Query: 505 RFNAFYVNSHSEKCHPVMIHR---AVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT 561
           R          +   P+++ +         E  I I  +NF          I+  +   T
Sbjct: 457 RSAYDLSVHAKKTGAPLVVRQRLEEPITIEEWDIAIDKKNFGPFYKKDGKTIENALLATT 516

Query: 562 SSAVEYAQEIANLLKSHHLSI 582
                   E+   L+ +   +
Sbjct: 517 QEQRG---ELVKQLEENGKVV 534


>gi|156974089|ref|YP_001444996.1| seryl-tRNA synthetase [Vibrio harveyi ATCC BAA-1116]
 gi|166223309|sp|A7MSW8|SYS_VIBHB RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|156525683|gb|ABU70769.1| hypothetical protein VIBHAR_01800 [Vibrio harveyi ATCC BAA-1116]
          Length = 435

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/190 (13%), Positives = 63/190 (33%), Gaps = 11/190 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + +  +M     +   Y E+  P +++      +G    +  ++F  +   + + D
Sbjct: 172 ARLHRAIAQFMLDLHTEEHGYTEMYVPYLVNSDSLFGTGQLPKFGKDLFHTEPLVEKVND 231

Query: 331 L--RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRG 385
              R  +L P        +    +    +LP+++      +R+E         GL+R+  
Sbjct: 232 EEPRKLSLIPTAEVPVTNLVRDTISDEADLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQ 291

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALW 441
           F + +       E   N   ++      + +        V L T              +W
Sbjct: 292 FDKVELVQITKPEDSMNALEELTGHAEKVLQLLELPYRKVVLCTGDMGFGARKTYDLEVW 351

Query: 442 DDAENIMKGV 451
             A+   + +
Sbjct: 352 VPAQETYREI 361


>gi|311748720|ref|ZP_07722505.1| serine--tRNA ligase [Algoriphagus sp. PR1]
 gi|126577252|gb|EAZ81500.1| serine--tRNA ligase [Algoriphagus sp. PR1]
          Length = 423

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/203 (14%), Positives = 69/203 (33%), Gaps = 16/203 (7%)

Query: 240 ESEKRDHRKLAREMDLFHIA----EDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEI 294
              K+ H +L ++ D+          G+G   +  KG ++ + LI++ +   +   Y E+
Sbjct: 138 HEGKKPHWELIKDYDIIDFDLGVKITGAGFPVYKGKGARLQRALINFFLDEAMAQGYTEV 197

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
             P ++++           Y       K             L P        ++   + +
Sbjct: 198 QPPILVNEDS--------GYGTGQLPDKEGQMYFASADNLYLIPTAEVPLTNLYRDVILT 249

Query: 355 YRELPVRLAEFGSVYRNEPSG---SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI 411
             +LPV+   F   +R E       + GL R+  F + +       ++ +     + + +
Sbjct: 250 EADLPVKNVGFTPCFRREAGSWGAHVRGLNRLHQFDKVEIVQITHPDKSYETLESMSSYV 309

Query: 412 ISIYKDFGFEKIMVKLSTRPEKR 434
             + K       +++L       
Sbjct: 310 QGLLKKLELPYRVLRLCGGDMGF 332


>gi|123220017|emb|CAM22591.1| seryl-aminoacyl-tRNA synthetase [Mus musculus]
          Length = 352

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/159 (16%), Positives = 54/159 (33%), Gaps = 9/159 (5%)

Query: 275 IFQTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           + Q LI Y +R      Y  I TP  + + + Q+      +   ++ V        D  +
Sbjct: 155 LEQALIQYALRTLGSRGYTPIYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGSEKSDDNS 214

Query: 334 FALKP---MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFT 387
           +  K     +     A+         +LP++ A   + +R E         G+ RV  F 
Sbjct: 215 YDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGRDTRGIFRVHQFE 274

Query: 388 QDDAHVFCTKEQ--MFNECLKIHNLIISIYKDFGFEKIM 424
           + +  V+ +      +    ++       Y+  G    +
Sbjct: 275 KIEQFVYSSPHDNKSWEMFDEMIATAEEFYQSLGIPYHI 313


>gi|33152253|ref|NP_873606.1| seryl-tRNA synthetase [Haemophilus ducreyi 35000HP]
 gi|46577207|sp|Q7VM65|SYS_HAEDU RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|33148475|gb|AAP95995.1| seryl-tRNA synthetase [Haemophilus ducreyi 35000HP]
          Length = 435

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 62/190 (32%), Gaps = 11/190 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK--CADDTI 328
            ++ + L  +M     +   Y E+N P +++      +G    +  ++F  +     D  
Sbjct: 171 ARLHRALAQFMLDLHSEQHGYMEVNVPLLVNHDTLYGTGQLPKFGEDLFHTQPLTGQDPN 230

Query: 329 KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRG 385
           +  R + L P        +    +     LP++L      +R E         GL+R+  
Sbjct: 231 EVQRPYGLIPTAEVPLTNLVRDEIVDEDSLPIKLVAHTPCFRAEAGSYGRDTRGLIRMHQ 290

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALW 441
           F + +       E+      ++      I +        V L T              +W
Sbjct: 291 FEKVELVQIVAPEKSMEALEELTGQAEKILQLLHLPYRKVLLCTGDMGFGSAKTYDLEVW 350

Query: 442 DDAENIMKGV 451
             A+N  + +
Sbjct: 351 LPAQNTYREI 360


>gi|294664247|ref|ZP_06729621.1| seryl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii str.
           ICPB 10535]
 gi|292605989|gb|EFF49266.1| seryl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii str.
           ICPB 10535]
          Length = 426

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 64/188 (34%), Gaps = 15/188 (7%)

Query: 273 WKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M      +  YEE N P +++    + +G    +  ++F        + +
Sbjct: 171 ARLHRALAQFMLDLHVGEHGYEETNVPLLVNADSMRGTGQLPKFEDDLFQT-----DVGE 225

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
            R + + P +      +    +     LP+R+      +R E         G++R   F 
Sbjct: 226 SRRYLI-PTSEVPLTNIVREEIIDAERLPLRMTAHSMCFRAEAGSGGRDTRGMIRQHQFE 284

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +    C  E    E  ++      + +  G     V L T              +W  
Sbjct: 285 KVELVTACAPEDSDAEHQRMTRCAEVVLEQLGLPYRKVLLCTGDMGFSAIKTYDLEVWLP 344

Query: 444 AENIMKGV 451
           ++N  + +
Sbjct: 345 SQNTYREI 352


>gi|153952683|ref|YP_001393448.1| seryl-tRNA synthetase [Clostridium kluyveri DSM 555]
 gi|219853356|ref|YP_002470478.1| hypothetical protein CKR_0013 [Clostridium kluyveri NBRC 12016]
 gi|189083564|sp|A5N469|SYS_CLOK5 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|254783019|sp|B9DXT9|SYS_CLOK1 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|146345564|gb|EDK32100.1| SerS [Clostridium kluyveri DSM 555]
 gi|219567080|dbj|BAH05064.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 426

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/236 (16%), Positives = 84/236 (35%), Gaps = 22/236 (9%)

Query: 220 IYGTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWK 274
             G       E+ +++   +   + + H  +   +++          GS   F+   G +
Sbjct: 115 PEGKLDEDNVEIRRWMEPTKFKFQPKAHWDIGTNLNILDFERGGKVAGSRFTFYRGLGAR 174

Query: 275 IFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           + + ++SY      +   YEEI  P ++++     +G    +  + F V   D       
Sbjct: 175 LERAIVSYYLDFHTEKHGYEEILPPYMVNRTSMIGTGQLPKFEEDAFRVANND------- 227

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQD 389
            F L P         + + +    +LP++   + + +R E   +     G++R   F + 
Sbjct: 228 -FFLIPTAEVPVTNFYRNEVLKGEDLPIKYVAYSACFRAEAGSAGRDTRGIIRQHQFNKV 286

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALW 441
           +   F   EQ ++E  K+ N    + K       +VK+                +W
Sbjct: 287 ELVKFAKPEQSYDELEKLTNDAEDVIKGLKIPYRVVKICKGDLGFTAALKYDIEVW 342


>gi|330443906|ref|YP_004376892.1| seryl-tRNA synthetase [Chlamydophila pecorum E58]
 gi|328807016|gb|AEB41189.1| seryl-tRNA synthetase [Chlamydophila pecorum E58]
          Length = 424

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 42/214 (19%), Positives = 81/214 (37%), Gaps = 16/214 (7%)

Query: 243 KRDHRKLAREMDLFHIA----EDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQ 298
            ++H +L + +D+          GSG   +   G  +   L++Y+ +K +    E+  P 
Sbjct: 136 PKNHLELNKALDILDFKSPAKTTGSGWPAYKNFGVLLEWALLTYLLQKQRAHGFELWLPP 195

Query: 299 VL-DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
           +L  + +   SG    +    + V+  D          L P          +  L + ++
Sbjct: 196 LLVKKEILYGSGQIPKFDGQYYRVEDGDHH------LYLIPTAEVVLNGFHSQELLNEKD 249

Query: 358 LPVRLAEFGSVYRNE---PSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           LP+  A     +R E         GL+RV  F + +   F T +Q  +   K+ +++  I
Sbjct: 250 LPLYYAACTPCFRREAGAAGSQERGLVRVHQFHKVEMFAFTTPDQEDSAYTKMLDIVEEI 309

Query: 415 YKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIM 448
             +      +  LST       S  +  DAE  +
Sbjct: 310 LIELELPYRLSLLSTGDMSFTASKTI--DAEVWL 341


>gi|328956051|ref|YP_004373384.1| histidyl-tRNA synthetase [Coriobacterium glomerans PW2]
 gi|328456375|gb|AEB07569.1| histidyl-tRNA synthetase [Coriobacterium glomerans PW2]
          Length = 438

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/112 (18%), Positives = 47/112 (41%), Gaps = 2/112 (1%)

Query: 531 IERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNET 590
            ER +  + E     L     P    V    +   E   +IA  L++  +  E D++  +
Sbjct: 325 FERIMLAL-EAQGTRLGKDAPPC-VYVANAGADLRERVFDIALQLRAAGVRTEADYQGRS 382

Query: 591 INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +  + ++    K  +II+ G +E +  ++ +R   S   + V+L + +  + 
Sbjct: 383 LKGQFKQADRLKAALIIVIGAEELAAGAVRVRDMVSHEERLVALDEILEDVR 434


>gi|224146257|ref|XP_002325939.1| predicted protein [Populus trichocarpa]
 gi|222862814|gb|EEF00321.1| predicted protein [Populus trichocarpa]
          Length = 533

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 41/202 (20%), Positives = 69/202 (34%), Gaps = 19/202 (9%)

Query: 446 NIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSR 505
            I+   L+  K   +   +  +  G   + G  FE + K       Q G+I       + 
Sbjct: 343 EILFDALERSKCIDKVVFDLSLARGLDYYTGVIFEAVFKGTT----QVGSIAAGGRYDNL 398

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE-NFKGNLPLWLSPIQAIV-TTITSS 563
              F          PV       G IER   IM +     N     +  Q ++      S
Sbjct: 399 IGMFG-------SKPVPAVGVSLG-IERVFAIMEQLQKDRNETTRPTETQVLLGIMGNKS 450

Query: 564 AVEYAQEIANLLKSHHLSIE--TDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
            +  A E+ + L S  L  E     R + I   I   +  KIP +++  D+E     + I
Sbjct: 451 KIPLAAELTSKLWSAKLKAEFVVSTRFDKI---ISRANDSKIPWMVLVRDRELETGKVKI 507

Query: 622 RRFGSTTTQKVSLLDAIPILTK 643
           R   +   ++V L   +  +  
Sbjct: 508 RNLETKIEEEVPLSAFVDEVKN 529


>gi|58426333|gb|AAW75370.1| seryl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC10331]
          Length = 466

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/205 (13%), Positives = 63/205 (30%), Gaps = 26/205 (12%)

Query: 273 WKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M      +  YEE N P +++    + +G    +  ++F +   +     
Sbjct: 188 ARLHRALAQFMLDLHVGEHGYEETNVPLLVNADSMRGTGQLPKFEDDLFRIYENEYEGHT 247

Query: 331 LRT-----------------FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP 373
                               + L P +      +    +     LP+R+      +R E 
Sbjct: 248 DEETGESFYTPTGGVDPDPAYYLIPTSEVPLTNIVRDEIIDAERLPLRMTAHSMCFRAEA 307

Query: 374 ---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR 430
                   G++R   F + +    C  E    E  ++      + +  G     V L T 
Sbjct: 308 GSGGRDTRGMIRQHQFEKVELVTACAPEDSDAEHQRMTRCAEVVLEQLGLPYRKVLLCTG 367

Query: 431 PEKR----VGSDALWDDAENIMKGV 451
                        +W  ++N  + +
Sbjct: 368 DMGFSAIKTYDLEVWLPSQNTYREI 392


>gi|53714701|ref|YP_100693.1| histidyl-tRNA synthetase [Bacteroides fragilis YCH46]
 gi|81690615|sp|Q64QS2|SYH_BACFR RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|52217566|dbj|BAD50159.1| histidyl-tRNA synthetase [Bacteroides fragilis YCH46]
          Length = 454

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 36/91 (39%)

Query: 553 IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
            Q +          ++  I +  ++  +  E       +  ++   ++K IP + I G+ 
Sbjct: 364 TQLLFINFGEKEAAFSMGILSKARAAGIRAEIFPDAAKMKKQMSYANVKNIPFVAIVGEN 423

Query: 613 EASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           E +E    ++   S   Q V+  + I  LTK
Sbjct: 424 EMNEGKAMLKNMESGEQQLVTAEELIGALTK 454


>gi|322804293|emb|CBZ01843.1| seryl-tRNA synthetase [Clostridium botulinum H04402 065]
          Length = 426

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 85/236 (36%), Gaps = 22/236 (9%)

Query: 220 IYGTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWK 274
             G       E+  +L   +   E + H  +   +++          GS   F+   G +
Sbjct: 115 PDGETDEDNIEIRNWLEPTKFDFEPKAHWDIGTNLNILDFERAGKVTGSRFTFYKGLGAR 174

Query: 275 IFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           + + +ISY      +   Y EI  P ++++     +G    +  + F +   D       
Sbjct: 175 LERAVISYFLDTHTEKHGYTEILPPYMVNRTSMIGTGQLPKFEEDAFKISEDD------- 227

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQD 389
            + L P        ++   +    ELP++   + + +R+E   +     GL+R   F + 
Sbjct: 228 -YFLIPTAEVPVTNLYRDEILKGDELPLKHVAYSACFRSEAGSAGRDTRGLVRQHQFNKV 286

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALW 441
           +   F   EQ + E  K+ N   ++ K+ G    +V++                +W
Sbjct: 287 ELVKFTKPEQSYEELEKLTNDAETVLKELGIPYRVVRICKGDLGFTAALKYDLEVW 342


>gi|319408736|emb|CBI82393.1| Alanyl-tRNA synthetase [Bartonella schoenbuchensis R1]
          Length = 889

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/162 (22%), Positives = 65/162 (40%), Gaps = 6/162 (3%)

Query: 36  KKAVAVAIN-GKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           KKA  V ++ G+V        +  +E+      R      HS  HI+ +A++    +  V
Sbjct: 525 KKAKGVFVHIGEVKSGQAKTHDC-VELAVDCVRRRKIRANHSATHILHKALRQTLGDHVV 583

Query: 95  AIGP-IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKAREL--FE 151
             G  +  D   +DF         +L +IE    EI+ ++S  + + ++ + A       
Sbjct: 584 QKGSFVSPDRLRFDFSHSGQILLKDLKKIEDLANEIVLQNSEVITRLMTVDDAISEGAIA 643

Query: 152 SKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTG 192
              E Y  E+      K +  +  +  W  +LC G HV  TG
Sbjct: 644 LFGEKYSDEVRVVSMGKRHEEIGEKDYWSIELCGGTHVHRTG 685


>gi|254805440|ref|YP_003083661.1| Seryl-tRNA synthetase [Neisseria meningitidis alpha14]
 gi|254668982|emb|CBA07314.1| Seryl-tRNA synthetase [Neisseria meningitidis alpha14]
 gi|325127114|gb|EGC50069.1| seryl-tRNA synthetase [Neisseria meningitidis N1568]
          Length = 431

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 64/188 (34%), Gaps = 11/188 (5%)

Query: 273 WKIFQTLISYMRRK--IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M     ++  Y E  TP ++D    Q +G    +  ++F V    D  K 
Sbjct: 171 ARLHRALAQFMLDTHTLQHGYTEHYTPYIVDDTTLQGTGQLPKFAEDLFHVTRGGDETKT 230

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
            +     P             +    +LP++L      +R+E         GL+R   F 
Sbjct: 231 TQYLI--PTAEVTLTNTVADSIIPSEQLPLKLTAHSPCFRSEAGSYGKDTRGLIRQHQFD 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E+ +    ++     +I K       ++ L T              +W  
Sbjct: 289 KVEMVQIVHPEKSYETLEEMVGHAENILKALELPYRVITLCTGDMGFGATKTYDLEVWVP 348

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 349 AQNTYREI 356


>gi|154149298|ref|YP_001405817.1| seryl-tRNA synthetase [Campylobacter hominis ATCC BAA-381]
 gi|166201246|sp|A7HZX6|SYS_CAMHC RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|153805307|gb|ABS52314.1| seryl-tRNA synthetase [Campylobacter hominis ATCC BAA-381]
          Length = 417

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 66/189 (34%), Gaps = 14/189 (7%)

Query: 271 KGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
            G K+   +I+YM        +E +N P ++   +   +G    ++ +++ V        
Sbjct: 169 MGAKLNLAIINYMIDFNQSRGFELVNLPFLVKDEILFGTGQLPKFKDDLYKV------DN 222

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGF 386
           D  +  L P +       +N  + S  ELPV+   +   +R E   +     G++R   F
Sbjct: 223 DELSLYLIPTSEVTATNFYNGEILSEDELPVKFTSYSHCFRKEAGSAGKDTRGMIRQHQF 282

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG----SDALWD 442
            + +       E       ++ +    + K  G     + L +              +W 
Sbjct: 283 EKVELVSITKPEDSDKMFDEMVSCASDLLKSLGLAHRQMMLCSGDLGFSAAKTIDLEVWL 342

Query: 443 DAENIMKGV 451
             +N  + +
Sbjct: 343 PGQNTYREI 351


>gi|150009141|ref|YP_001303884.1| alanyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503]
 gi|298377115|ref|ZP_06987069.1| alanine--tRNA ligase [Bacteroides sp. 3_1_19]
 gi|205830169|sp|A6LEZ8|SYA_PARD8 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|149937565|gb|ABR44262.1| alanyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503]
 gi|298266099|gb|EFI07758.1| alanine--tRNA ligase [Bacteroides sp. 3_1_19]
          Length = 873

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 48/325 (14%), Positives = 101/325 (31%), Gaps = 67/325 (20%)

Query: 7   LTFPDGSIK--NFPVHATGSDV--AESISRS--------LAKKAVAVAINGKVCDLSDPV 54
           +T  DG  K   + +    +++     I +         L +      + G+V D    +
Sbjct: 455 ITLKDGECKFVGYDLFECEAEILRYRQIKQKNKVLYQIVLDQTPFYAEMGGQVGDTGWLI 514

Query: 55  REGS-IEIITPEDPRSLAVI---------------------------RHSCAHIMAEAVQ 86
            +   I++I  +   +L V                             HS  H++ EA++
Sbjct: 515 ADDEKIDVIDTKRENNLPVHLVTKLPKDVTATFTAKINVKKRIQCECNHSATHLLHEALR 574

Query: 87  SIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFL-KQYLSHE 144
            +        G  +  D   +DF   Q  + +E+ ++E  + E I  + P    + +   
Sbjct: 575 EVLGTHVEQKGSYVSPDSLRFDFSHFQKVTDEEIRKVEILVGEKIRANFPLEEHRNMPIA 634

Query: 145 KARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVA 204
           +A+ L        K          + V + + G   +LC G H+ +TG +     + + +
Sbjct: 635 EAKALGAMALFGEKY--------GDEVRVVKYGSSVELCGGTHIPATGMIGSLRVIGESS 686

Query: 205 GAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSG 264
                  +               Q    Q     E     +H     +     I E+   
Sbjct: 687 I------AAGVRRIEAVTAEGAEQFVYAQQDLIRELRALMNHMPNLAQAMKKSIEEN--- 737

Query: 265 VIFWHRKGWKIFQTLISYMRRKIKD 289
                    ++ + +  Y+R K   
Sbjct: 738 --------AEMKKQIEDYIREKSMR 754


>gi|114558187|ref|XP_001148216.1| PREDICTED: seryl-tRNA synthetase isoform 3 [Pan troglodytes]
          Length = 466

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/159 (16%), Positives = 54/159 (33%), Gaps = 9/159 (5%)

Query: 275 IFQTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           + Q LI Y +R      Y  I TP  + + + Q+      +   ++ V        D  +
Sbjct: 155 LEQALIQYALRTLGSRGYIPIYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGSEKSDDNS 214

Query: 334 FALKP---MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFT 387
           +  K     +     A+         +LP++ A   + +R E         G+ RV  F 
Sbjct: 215 YDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGRDTRGIFRVHQFE 274

Query: 388 QDDAHVFCTKEQ--MFNECLKIHNLIISIYKDFGFEKIM 424
           + +  V+ +      +    ++       Y+  G    +
Sbjct: 275 KIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHI 313


>gi|90416725|ref|ZP_01224655.1| alanyl-tRNA synthetase [marine gamma proteobacterium HTCC2207]
 gi|90331478|gb|EAS46714.1| alanyl-tRNA synthetase [marine gamma proteobacterium HTCC2207]
          Length = 864

 Score = 60.2 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 63/158 (39%), Gaps = 19/158 (12%)

Query: 37  KAVAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAI 96
           K ++  +N  V D      + S+        R+   + HS  H++  A+Q I  E     
Sbjct: 524 KVLSGELN--VGDAVTATVDCSV--------RTATALNHSATHLLHSALQQILGEHVNQK 573

Query: 97  GPIIED-GFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKE 155
           G +++     +DF   +  S+ ++  IE ++   I R++P     +S ++A E       
Sbjct: 574 GSLVDSQRLRFDFSHGESISAQQIRDIEHRVNREILRNTPVQTDVMSMDEAVEKGAMALF 633

Query: 156 AYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTG 192
             K          E   L   G++  +LC G H   TG
Sbjct: 634 GEKY-------GSEVRVLSMGGDFSVELCGGTHANRTG 664


>gi|328473158|gb|EGF44006.1| seryl-tRNA synthetase [Vibrio parahaemolyticus 10329]
          Length = 435

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/190 (13%), Positives = 63/190 (33%), Gaps = 11/190 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + +  +M     +   Y E+  P +++      +G    +  ++F  +   + + D
Sbjct: 172 ARLHRAIAQFMLDLHTEEHGYTEMYVPYLVNSDSLFGTGQLPKFGKDLFHTEPLAEKVND 231

Query: 331 L--RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRG 385
              R  +L P        +    +    +LP+++      +R+E         GL+R+  
Sbjct: 232 EEPRKLSLIPTAEVPVTNLVRDTITDEADLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQ 291

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALW 441
           F + +       E   N   ++      + +        V L T              +W
Sbjct: 292 FDKVELVQITKPEDSMNALEELTGHAEKVLQLLELPYRKVVLCTGDMGFGARKTYDLEVW 351

Query: 442 DDAENIMKGV 451
             A+   + +
Sbjct: 352 VPAQETYREI 361


>gi|265765836|ref|ZP_06093877.1| histidyl-tRNA synthetase [Bacteroides sp. 2_1_16]
 gi|263253504|gb|EEZ24969.1| histidyl-tRNA synthetase [Bacteroides sp. 2_1_16]
          Length = 454

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 36/91 (39%)

Query: 553 IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
            Q +          ++  I +  ++  +  E       +  ++   ++K IP + I G+ 
Sbjct: 364 TQLLFINFGEKEAAFSMGILSKARAAGIRAEIFPDAAKMKKQMSYANVKNIPFVAIVGEN 423

Query: 613 EASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           E +E    ++   S   Q V+  + I  LTK
Sbjct: 424 EMNEGKAMLKNMESGEQQLVTAEELIGALTK 454


>gi|301115782|ref|XP_002905620.1| alanyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
 gi|262110409|gb|EEY68461.1| alanyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
          Length = 897

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/145 (18%), Positives = 51/145 (35%), Gaps = 3/145 (2%)

Query: 54  VREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQ 112
           + E ++E       RS   + H+  H++  A+++   E     G  +  D   +DF    
Sbjct: 565 LNEATVEAHVDRRFRSGCAVHHTATHLLQRALKAELGEHVTQAGSQVTSDRLRFDFAHFG 624

Query: 113 PFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVT 172
             S+DE+A +E ++    A +       L  E A           K    + +       
Sbjct: 625 ALSADEMASVEARVNAFAAAELDVSTVELPREDAERSGAICNFGDKYG--DVVRVVRVGG 682

Query: 173 LYRQGEWFDLCRGPHVRSTGQVKKF 197
                   + C G HV +  ++  F
Sbjct: 683 EAETPVSSEFCGGTHVNNVREIFPF 707


>gi|253565206|ref|ZP_04842662.1| histidyl-tRNA synthetase [Bacteroides sp. 3_2_5]
 gi|251946671|gb|EES87048.1| histidyl-tRNA synthetase [Bacteroides sp. 3_2_5]
          Length = 454

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 36/91 (39%)

Query: 553 IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
            Q +          ++  I +  ++  +  E       +  ++   ++K IP + I G+ 
Sbjct: 364 TQLLFINFGEKEAAFSMGILSKARAAGIRAEIFPDAAKMKKQMSYANVKNIPFVAIVGEN 423

Query: 613 EASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           E +E    ++   S   Q V+  + I  LTK
Sbjct: 424 EMNEGKAMLKNMESGEQQLVTAEELIGALTK 454


>gi|190344834|gb|EDK36592.2| seryl-tRNA synthetase [Meyerozyma guilliermondii ATCC 6260]
          Length = 497

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 58/350 (16%), Positives = 111/350 (31%), Gaps = 44/350 (12%)

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK---EAYKVEILESIPAKENVTLY 174
           EL ++ KKM  +  +     ++Y + E A EL + K    E  K  I +   A  ++   
Sbjct: 86  ELDEMNKKMNALQKQ---IGQKYKAKEDASELLKQKDTYTEEKKQLIEKEQKADTDLRFK 142

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
                        V   G +     +          D     L R +      ++     
Sbjct: 143 -------------VNQIGNIVHESVVDS-------QDEENNELVRTW-LPEGVKEAGAIA 181

Query: 235 LYFLEESEKRDHRKLAREMDL---FHIAEDGSGVIFWHRKGWKIFQTLISY-MRRKIKDD 290
                 +    H  L R         +   G    F    G  + Q LI+Y +     + 
Sbjct: 182 TATGAPAALSHHEVLLRLDGYDPERGVRIVGHRGYFLRNYGVFLNQALINYGLHFLASNG 241

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH 350
           Y  +  P ++++ +  ++     +   ++ V   DD       + +     P        
Sbjct: 242 YTPLQAPVMMNKEVMAKTAQLSQFDEELYKVIDGDD-----EKYLIATSEQPISAYHAGE 296

Query: 351 GLKSYR-ELPVRLAEFGSVYRNEPSGSLH---GLMRVRGFTQDDAHVFCTKEQMFNECLK 406
             +S   +LPVR A + S +R E         G+ RV  F + +  V    E+ + E  +
Sbjct: 297 WFESPEEQLPVRYAGYSSCFRREAGSHGKDAWGIFRVHAFEKIEQFVLTEPEKSWEEFDR 356

Query: 407 IHNLIISIYKDFGFEKIMVKLS----TRPEKRVGSDALWDDAENIMKGVL 452
           +  L    Y+  G    +V +          +      W   +   K ++
Sbjct: 357 MIGLSEKFYQSLGLPYRVVGIVSGELNNAAAKKYDLEAWFPFQKEYKELV 406


>gi|146422756|ref|XP_001487313.1| seryl-tRNA synthetase [Meyerozyma guilliermondii ATCC 6260]
          Length = 497

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 58/350 (16%), Positives = 111/350 (31%), Gaps = 44/350 (12%)

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK---EAYKVEILESIPAKENVTLY 174
           EL ++ KKM  +  +     ++Y + E A EL + K    E  K  I +   A  ++   
Sbjct: 86  ELDEMNKKMNALQKQ---IGQKYKAKEDASELLKQKDTYTEEKKQLIEKEQKADTDLRFK 142

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQY 234
                        V   G +     +          D     L R +      ++     
Sbjct: 143 -------------VNQIGNIVHESVVDS-------QDEENNELVRTW-LPEGVKEAGAIA 181

Query: 235 LYFLEESEKRDHRKLAREMDL---FHIAEDGSGVIFWHRKGWKIFQTLISY-MRRKIKDD 290
                 +    H  L R         +   G    F    G  + Q LI+Y +     + 
Sbjct: 182 TATGAPAALSHHEVLLRLDGYDPERGVRIVGHRGYFLRNYGVFLNQALINYGLHFLASNG 241

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH 350
           Y  +  P ++++ +  ++     +   ++ V   DD       + +     P        
Sbjct: 242 YTPLQAPVMMNKEVMAKTAQLSQFDEELYKVIDGDD-----EKYLIATSEQPISAYHAGE 296

Query: 351 GLKSYR-ELPVRLAEFGSVYRNEPSGSLH---GLMRVRGFTQDDAHVFCTKEQMFNECLK 406
             +S   +LPVR A + S +R E         G+ RV  F + +  V    E+ + E  +
Sbjct: 297 WFESPEEQLPVRYAGYSSCFRREAGSHGKDAWGIFRVHAFEKIEQFVLTEPEKSWEEFDR 356

Query: 407 IHNLIISIYKDFGFEKIMVKLS----TRPEKRVGSDALWDDAENIMKGVL 452
           +  L    Y+  G    +V +          +      W   +   K ++
Sbjct: 357 MIGLSEKFYQSLGLPYRVVGIVSGELNNAAAKKYDLEAWFPFQKEYKELV 406


>gi|83593105|ref|YP_426857.1| seryl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170]
 gi|123526569|sp|Q2RTH5|SYS_RHORT RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|83576019|gb|ABC22570.1| seryl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170]
          Length = 423

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 62/188 (32%), Gaps = 18/188 (9%)

Query: 273 WKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M      +  Y+E+ TP ++     Q +G    +  ++F V+        
Sbjct: 170 ARLERALGQFMLDLHITEHGYQEVQTPVLVRAPALQGTGQLPKFAEDLFRVEG------- 222

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE---PSGSLHGLMRVRGFT 387
              F L P        +    + +   LP+R+  F   +R+E         G++R   F 
Sbjct: 223 --DFFLIPTAEVTVTNLVAGQVLAATALPLRMTAFTQCFRSEAGAAGKDTRGMIRQHQFE 280

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       +    E  ++      + K       ++ L                +W  
Sbjct: 281 KVEMVSIVHPDDSAAELERMTACAEDVLKRLELPYRVMALCAGDVGFSARQTYDLEVWLP 340

Query: 444 AENIMKGV 451
            ++  + +
Sbjct: 341 GQDRYREI 348


>gi|284166966|ref|YP_003405245.1| glycyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511]
 gi|284016621|gb|ADB62572.1| glycyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511]
          Length = 593

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/272 (14%), Positives = 84/272 (30%), Gaps = 41/272 (15%)

Query: 388 QDDAHVFC-TKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
             +   F    +   ++  +  +   +I+K +   K + + +  P+          DA+ 
Sbjct: 334 WIEMAGFAYRGDYDLSKHDEYSDDRFTIFKQYDEPKTVERATVDPDMSYLGPEFGGDAQA 393

Query: 447 IMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRF 506
           +++  LD +                 AF G   E  L+         G         +RF
Sbjct: 394 VVQK-LDDLAAR-----------DRAAFEGDTVEIDLE---------GETHELPVEKTRF 432

Query: 507 NAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIEN------------FKGNLPLWLSPIQ 554
                    E   P ++       ++R +  ++ +               +L   ++P  
Sbjct: 433 AVEEQTEAGEHITPHVV--EPSFGVDRLVYTVLHHAYREDEVDGEERTYLDLEPEVAPTF 490

Query: 555 AIVTT--ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
             V            A EI   L+   LS+  D     I  + R       P  +    +
Sbjct: 491 VGVFPLQNDEELEAQANEIVADLREVGLSVTYDDSGN-IGRRYRRQDEVGTPFCVTVDYE 549

Query: 613 --EASERSIGIRRFGSTTTQKVSLLDAIPILT 642
             E  E ++ +R   +T  +++ + D    L+
Sbjct: 550 TVEDEETTVTVRERDTTDQKRLPVDDLAETLS 581



 Score = 45.9 bits (107), Expect = 0.024,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 29/77 (37%), Gaps = 2/77 (2%)

Query: 328 IKDLRTFALKPMNCPGHVAVF-NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
             D     ++P    G    F      +  +LP  + + G  YRNE S     ++R R F
Sbjct: 167 PGDSDPGYMRPETAQGIFVEFPRLKEYARNQLPFGVTQIGRAYRNEISPR-RSIIRTREF 225

Query: 387 TQDDAHVFCTKEQMFNE 403
           TQ +   F   E    +
Sbjct: 226 TQAELEYFVDPETDEPD 242


>gi|242239683|ref|YP_002987864.1| seryl-tRNA synthetase [Dickeya dadantii Ech703]
 gi|242131740|gb|ACS86042.1| seryl-tRNA synthetase [Dickeya dadantii Ech703]
          Length = 431

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 64/188 (34%), Gaps = 10/188 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M         YEE   P +++      +G    ++ ++F  +  ++   +
Sbjct: 171 ARLHRALAQFMLNLHTAEHGYEEAYVPYLVNHATLYGTGQLPKFKEDLFHTRPLEEEA-E 229

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
             ++AL P        +    +     LP++L      +R+E       + GL+RV  F 
Sbjct: 230 TSSYALIPTAEVPLTNLVRDEILDEESLPIKLTAHTPCFRSEAGSYGRDMRGLIRVHQFD 289

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E       ++      + +        V L T              +W  
Sbjct: 290 KVEMVQIVRPEDSMQALEELTGHAEKVLQLLQLPYRKVLLCTGDMGFGSCKTYDLEVWLP 349

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 350 AQNTYREI 357


>gi|170754615|ref|YP_001779642.1| seryl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
 gi|229559899|sp|B1IDV4|SYS_CLOBK RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|169119827|gb|ACA43663.1| seryl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
          Length = 426

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 85/236 (36%), Gaps = 22/236 (9%)

Query: 220 IYGTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWK 274
             G       E+  +L   +   E + H  +   +++          GS   F+   G +
Sbjct: 115 PDGETDEDNIEIRNWLEPTKFDFEPKAHWDIGTNLNILDFERAGKVTGSRFTFYKGLGAR 174

Query: 275 IFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           + + +ISY      +   Y EI  P ++++     +G    +  + F +   D       
Sbjct: 175 LERAVISYFLDTHTEKHGYTEILPPYMVNRTSMIGTGQLPKFEEDAFKISEDD------- 227

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQD 389
            + L P        ++   +    ELP++   + + +R+E   +     GL+R   F + 
Sbjct: 228 -YFLIPTAEVPVTNLYRDEILKGDELPLKHVAYSACFRSEAGSAGRDTRGLVRQHQFNKV 286

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALW 441
           +   F   EQ + E  K+ N   ++ K+ G    +V++                +W
Sbjct: 287 ELVKFTKPEQSYEELEKLTNDAETVLKELGIPYRVVRICKGDLGFTAALKYDLEVW 342


>gi|116618408|ref|YP_818779.1| histidyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|116097255|gb|ABJ62406.1| histidyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
          Length = 433

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 66/424 (15%), Positives = 142/424 (33%), Gaps = 64/424 (15%)

Query: 267 FWHRKGWK--IFQTLISYMRRKIKD-------DYEEINTPQVLDQHLWQQSGHWDSYRAN 317
           F   KG    + Q  + +   +          +++EI TP   +  ++ +S       ++
Sbjct: 6   FQRPKGTADLLPQKTVQWQHVEAVARVLFGDYNFKEIRTPLFENFEVFSRS---AGDTSD 62

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVF--NHGLKSYRELPVRLAEFGSVYRNEPSG 375
           +   +  D   K  R  AL+P    G V  +  N       + P +    G ++R E   
Sbjct: 63  VVTKEMYDFHDKGDRHIALRPEGTAGVVRAYVENKLYGPEFDKPYKAFYMGPMFRYERPQ 122

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
           +     R R F Q  A VF +     +   ++  ++I  ++  G + +  K++       
Sbjct: 123 A----GRFRQFHQIGAEVFGSDSPALDA--EVIAMVIDFFQTLGLKNL--KVAINTLGDK 174

Query: 436 GSDALWDDA-ENIMKGVLDTIKNSSQDRINTGVL-------LGEGAF--YGPKF-EYILK 484
            S   +  A  + +K   D +   SQ R+    L         +  F    P   +++ +
Sbjct: 175 ESRDAYRQALIDYLKPHFDELSADSQARLEKNPLRVLDSKDPRDQVFVADAPSILDFLSE 234

Query: 485 DAIGRDWQCGTI----------------QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
            +     +   I                 +D+   + F     +   +    +       
Sbjct: 235 KSTKHWEKLQDILTALNLDFDIDTTMVRGLDYYNDTIFEIMTTDESLKGAATIAGGGRYS 294

Query: 529 GSIERF---------IGIMIE---NFKGNLPLWLSPIQ---AIVTTITSSAVEYAQEIAN 573
           G +E F          GI +E   +      +  +  Q     V  I  +    A +I  
Sbjct: 295 GLVEEFGGPETPGVGFGIGVERLLDLLQAQNVAPTEEQNLDFYVVNIGDTTDVIATKIVQ 354

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            ++S     E D+ +++   + +         +I  G++E  E+ + I+   +   + V 
Sbjct: 355 AVRSFGYVAERDYLSKSAKAQFKAADRHHAKYVITIGEQELEEQIVNIKNMTNGEQKSVQ 414

Query: 634 LLDA 637
           L + 
Sbjct: 415 LSEL 418


>gi|260063153|ref|YP_003196233.1| histidyl-tRNA synthetase [Robiginitalea biformata HTCC2501]
 gi|257796362|gb|EAR14033.2| histidyl-tRNA synthetase [Robiginitalea biformata HTCC2501]
          Length = 460

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 12/91 (13%), Positives = 29/91 (31%), Gaps = 3/91 (3%)

Query: 555 AIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
                        A  +   L+S  +  +    +  +  + +    + +P +++ GD+E 
Sbjct: 369 VFCINFGPEEARSALRLVMRLRSRGIRADLYPNDAKVGKQFKYADKRDVPFVVLIGDEEL 428

Query: 615 SERSIGIRRFGSTTTQKVSLL---DAIPILT 642
            +    +R       Q   L    D    L+
Sbjct: 429 RKGEFTVRDMRGGGQQSYPLDAWEDFADTLS 459


>gi|33468931|ref|NP_035449.1| seryl-tRNA synthetase, cytoplasmic isoform 1 [Mus musculus]
 gi|26349967|dbj|BAC38623.1| unnamed protein product [Mus musculus]
 gi|123220016|emb|CAM22590.1| seryl-aminoacyl-tRNA synthetase [Mus musculus]
 gi|148670022|gb|EDL01969.1| seryl-aminoacyl-tRNA synthetase, isoform CRA_b [Mus musculus]
          Length = 536

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/159 (16%), Positives = 54/159 (33%), Gaps = 9/159 (5%)

Query: 275 IFQTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           + Q LI Y +R      Y  I TP  + + + Q+      +   ++ V        D  +
Sbjct: 203 LEQALIQYALRTLGSRGYTPIYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGSEKSDDNS 262

Query: 334 FALKP---MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFT 387
           +  K     +     A+         +LP++ A   + +R E         G+ RV  F 
Sbjct: 263 YDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGRDTRGIFRVHQFE 322

Query: 388 QDDAHVFCTKEQ--MFNECLKIHNLIISIYKDFGFEKIM 424
           + +  V+ +      +    ++       Y+  G    +
Sbjct: 323 KIEQFVYSSPHDNKSWEMFDEMIATAEEFYQSLGIPYHI 361


>gi|308162069|gb|EFO64495.1| Uridine kinase [Giardia lamblia P15]
          Length = 582

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/165 (15%), Positives = 58/165 (35%), Gaps = 5/165 (3%)

Query: 4   DIKLT-FPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
            I LT  P G               +     +   A+A  +N ++  L++ +    +IE 
Sbjct: 24  PITLTYLPTGQQITTKSEIPVGQALKVFDPEI--NAIAALVNNEILSLNEKLDISSTIEP 81

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           I  +   +  +   S    +  A   ++    +    I+++  ++ F  +   + D+L  
Sbjct: 82  IFFKGEYARQIFCDSFTVALQAAATKLFRGQALECCYIMQNARFFKF-TDMALTHDDLDA 140

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIP 166
           ++  + +I   D    +  +S   A    +         +L SI 
Sbjct: 141 LKALLIDISDADLKISRTTVSFNDALHYLKEIHHKGSCNLLTSIN 185


>gi|206896025|ref|YP_002246808.1| alanyl-tRNA synthetase [Coprothermobacter proteolyticus DSM 5265]
 gi|206738642|gb|ACI17720.1| alanyl-tRNA synthetase [Coprothermobacter proteolyticus DSM 5265]
          Length = 876

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/161 (19%), Positives = 68/161 (42%), Gaps = 11/161 (6%)

Query: 50  LSDPVREGSIEIITPEDPRSLAVIR-HSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYD 107
            S  ++EG    +  +  R  A+ R H+  H++  A++ +  +     G  +  D F +D
Sbjct: 536 TSGVIKEGQQAFLQVDIERRKAMQRAHTATHLLHAALRRVLGDHVRQGGSKVGPDWFRFD 595

Query: 108 FDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPA 167
           F   +  S  ++ ++E+ + E +  +      + S ++A+++        K         
Sbjct: 596 FSHFESMSPAQIQEVERLVNEQVLENKEVNIFFTSLDEAKKMGAMALFGEKY-------- 647

Query: 168 KENVTLYRQGEW-FDLCRGPHVRSTGQVKKFFKLMKVAGAY 207
            E V +    +W  +LC G H + TG +  F  + + A + 
Sbjct: 648 GETVRVVEVPDWSMELCGGTHAKRTGDIGLFHIISESASSQ 688


>gi|90420928|ref|ZP_01228833.1| alanyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1]
 gi|90334903|gb|EAS48675.1| alanyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1]
          Length = 890

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/147 (19%), Positives = 58/147 (39%), Gaps = 10/147 (6%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSD 117
           +++I     R+     HS  H++ E ++ I        G  +  +   +DF   +P    
Sbjct: 548 LDLIVDHGRRTKIRANHSATHLLHEGLREILGSHVAQKGSMVAPERLRFDFSHPKPIEPG 607

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARE------LFESKKEAYKVEILESIPAKENV 171
           ELA++E+    I+ +++P   + ++ + A          E   +  +V  + +    E  
Sbjct: 608 ELAEVERLANGIVLQNAPVETRLMAVDDAIASGAMALFGEKYGDEVRVVSMGTGEEGEKA 667

Query: 172 TLYRQGEWFDLCRGPHVRSTGQVKKFF 198
                    +LC G HV +TG +    
Sbjct: 668 GKTF---SIELCGGTHVNATGDIGLVH 691


>gi|325921976|ref|ZP_08183781.1| seryl-tRNA synthetase [Xanthomonas gardneri ATCC 19865]
 gi|325547526|gb|EGD18575.1| seryl-tRNA synthetase [Xanthomonas gardneri ATCC 19865]
          Length = 449

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/205 (13%), Positives = 63/205 (30%), Gaps = 26/205 (12%)

Query: 273 WKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M      +  YEE N P +++      +G    +  ++F +   +   + 
Sbjct: 171 ARLHRALAQFMLDLHVGEHGYEETNVPLLVNAESMHGTGQLPKFEDDLFRIYEDEYDSQT 230

Query: 331 LRT-----------------FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP 373
                               + L P +      +    +     LP+R+      +R E 
Sbjct: 231 DEETGEVAHWRTGQIDPEPAYYLIPTSEVPLTNIVRDEIVDAERLPLRMTAHSMCFRAEA 290

Query: 374 ---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR 430
                   G++R   F + +    C  E    E  ++      + +  G     V L T 
Sbjct: 291 GSGGRDTRGMIRQHQFEKVELVTACAPEDSDAEHQRMTRCAEVVLEKLGLPYRKVLLCTG 350

Query: 431 PEKRV----GSDALWDDAENIMKGV 451
                        +W  +++  + +
Sbjct: 351 DMGFAAIKTYDLEVWLPSQDTYREI 375


>gi|315142784|gb|ADT80967.1| glutamyl- and prolyl-tRNA synthetase [Myrmekiaphila fluviatilis]
 gi|315142786|gb|ADT80968.1| glutamyl- and prolyl-tRNA synthetase [Myrmekiaphila fluviatilis]
 gi|315142792|gb|ADT80971.1| glutamyl- and prolyl-tRNA synthetase [Myrmekiaphila foliata]
 gi|315142806|gb|ADT80978.1| glutamyl- and prolyl-tRNA synthetase [Myrmekiaphila torreya]
 gi|315142814|gb|ADT80982.1| glutamyl- and prolyl-tRNA synthetase [Myrmekiaphila coreyi]
 gi|315142816|gb|ADT80983.1| glutamyl- and prolyl-tRNA synthetase [Myrmekiaphila coreyi]
 gi|315142818|gb|ADT80984.1| glutamyl- and prolyl-tRNA synthetase [Myrmekiaphila coreyi]
 gi|315142820|gb|ADT80985.1| glutamyl- and prolyl-tRNA synthetase [Myrmekiaphila coreyi]
 gi|315142822|gb|ADT80986.1| glutamyl- and prolyl-tRNA synthetase [Myrmekiaphila coreyi]
 gi|315142826|gb|ADT80988.1| glutamyl- and prolyl-tRNA synthetase [Myrmekiaphila torreya]
 gi|315142832|gb|ADT80991.1| glutamyl- and prolyl-tRNA synthetase [Myrmekiaphila torreya]
 gi|315142836|gb|ADT80993.1| glutamyl- and prolyl-tRNA synthetase [Myrmekiaphila fluviatilis]
 gi|315142838|gb|ADT80994.1| glutamyl- and prolyl-tRNA synthetase [Myrmekiaphila jenkinsi]
 gi|315142854|gb|ADT81002.1| glutamyl- and prolyl-tRNA synthetase [Myrmekiaphila howelli]
 gi|315142860|gb|ADT81005.1| glutamyl- and prolyl-tRNA synthetase [Myrmekiaphila millerae]
 gi|315142862|gb|ADT81006.1| glutamyl- and prolyl-tRNA synthetase [Myrmekiaphila millerae]
 gi|315142864|gb|ADT81007.1| glutamyl- and prolyl-tRNA synthetase [Myrmekiaphila millerae]
 gi|315142870|gb|ADT81010.1| glutamyl- and prolyl-tRNA synthetase [Myrmekiaphila neilyoungi]
 gi|315142872|gb|ADT81011.1| glutamyl- and prolyl-tRNA synthetase [Myrmekiaphila fluviatilis]
          Length = 148

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 52/143 (36%), Gaps = 19/143 (13%)

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           GA +    E  +  + GR  Q  T   +  N    F   + +  + +     +++  +G 
Sbjct: 9   GADFTTTVEAYVP-SNGRAIQGATSHHLGQNFSKMFEIVFEHPDTVEKQ--YVYQNSWGL 65

Query: 531 IERFIGIMIENFKGNLPLWL----SPIQAIVTTITSSA----------VEYAQEIANLLK 576
             R IG+ +     N  L L    +P Q ++     +A           E  + +   L+
Sbjct: 66  SSRSIGVAVMVHGDNAGLVLPPRVAPHQVVIVPCGVTANLPESEKKLLAEKCEALEKELR 125

Query: 577 SHHLSIETDFR-NETINYKIREH 598
              + ++ D+R N +  +K    
Sbjct: 126 EASIRVKGDYRENYSPGWKFNHW 148


>gi|311104420|ref|YP_003977273.1| seryl-tRNA synthetase [Achromobacter xylosoxidans A8]
 gi|310759109|gb|ADP14558.1| seryl-tRNA synthetase [Achromobacter xylosoxidans A8]
          Length = 452

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/233 (16%), Positives = 78/233 (33%), Gaps = 24/233 (10%)

Query: 242 EKRDHRKLAREMDL-FHIAEDGSGVIF-WHRKG--WKIFQTLISYMRRKIK--DDYEEIN 295
           E RDH  +   + L F +A   SG  F +  +G   ++ + L  +M         Y E  
Sbjct: 143 EARDHVAIGEPLGLDFDMAAKLSGARFSFM-RGPIARLHRALSQFMLDLQTGTHGYTECY 201

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKP----------MNCPGHV 345
           TP +++      +G    ++ +MFAV               KP           +     
Sbjct: 202 TPYIVNASTLYGTGQLPKFKDDMFAVSKGGGDDDPKVDDQGKPYVREDQYLISTSEITLT 261

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFN 402
           +V    +++  +LP++L      +R+E         G++R   F + +       +Q + 
Sbjct: 262 SVARDTIQAAADLPLKLTAHTPCFRSEAGSGGRDTRGMIRQHQFDKVEMVQITQPDQSYE 321

Query: 403 ECLKIHNLIISIYKDFGFEKI----MVKLSTRPEKRVGSDALWDDAENIMKGV 451
               +      + +  G                  +     +W  A+N  + +
Sbjct: 322 ALEDMVGHAERVLQLLGLPYRVVLLCTGDMGFGSAKTYDLEVWLPAQNTWREI 374


>gi|297616225|ref|YP_003701384.1| seryl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
 gi|297144062|gb|ADI00819.1| seryl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
          Length = 423

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/244 (15%), Positives = 82/244 (33%), Gaps = 22/244 (9%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIF 276
           G       E+ ++    +   E + H  +   +D+          G+    +   G ++ 
Sbjct: 114 GAGDADNVEVRRWGEPRKFDFEPQAHWDIGVALDILDFERAAKLSGARFTVYKGLGARLE 173

Query: 277 QTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           + LIS+M     D   Y E+  P ++       +G    +  +MF V        + R  
Sbjct: 174 RALISFMLDLHVDKHGYREVFPPFMVTADCMVGTGQLPKFAEDMFKV--------EGREL 225

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDA 391
            + P        ++   + +  +LP+ L  + + +R E         G++R   F + + 
Sbjct: 226 YMVPTAEVPLTNLYREEILAAEQLPMYLTAYTACFRAEAGSHGRDTRGIIRQHQFNKVEL 285

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENI 447
               + E  + E  K+      + +  G    ++ L T              +W  +   
Sbjct: 286 VKITSPETSYEELEKLTRDAEEVLQLLGLPYRVMLLCTGDMGFSSAKTYDLEVWLPSYGE 345

Query: 448 MKGV 451
            K +
Sbjct: 346 YKEI 349


>gi|294141935|ref|YP_003557913.1| alanyl-tRNA synthetase [Shewanella violacea DSS12]
 gi|293328404|dbj|BAJ03135.1| alanyl-tRNA synthetase [Shewanella violacea DSS12]
          Length = 874

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 55/142 (38%), Gaps = 10/142 (7%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSS 116
           S+E    +  R    + HS  H++  A++ +        G +++     +DF   +    
Sbjct: 545 SLEASVDKALRQRTELNHSVTHLLHAALRQLLGTHVSQKGSLVDPERLRFDFSHFEGVKP 604

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
           +EL  +E  +   I  +     Q ++ + A++         K          + V +   
Sbjct: 605 EELQAVEDLVNTQIRCNHELTAQVMTIDAAKDKGAMALFGEKY--------ADEVRVVTM 656

Query: 177 GEW-FDLCRGPHVRSTGQVKKF 197
           G++  +LC G HV  TG +  F
Sbjct: 657 GDFSIELCGGTHVGRTGDIGLF 678


>gi|238854670|ref|ZP_04645000.1| histidine--tRNA ligase [Lactobacillus jensenii 269-3]
 gi|260664387|ref|ZP_05865239.1| histidyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
 gi|282932939|ref|ZP_06338336.1| histidine--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|313472207|ref|ZP_07812699.1| histidine--tRNA ligase [Lactobacillus jensenii 1153]
 gi|238832460|gb|EEQ24767.1| histidine--tRNA ligase [Lactobacillus jensenii 269-3]
 gi|239529590|gb|EEQ68591.1| histidine--tRNA ligase [Lactobacillus jensenii 1153]
 gi|260561452|gb|EEX27424.1| histidyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
 gi|281302974|gb|EFA95179.1| histidine--tRNA ligase [Lactobacillus jensenii 208-1]
          Length = 426

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 64/417 (15%), Positives = 129/417 (30%), Gaps = 77/417 (18%)

Query: 276 FQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           ++ +    R    + +Y EI TP       ++         +++   +  D   K  R  
Sbjct: 20  WEKVEQIARDFFKQANYREIRTP---SFESYEVFSRSSGETSDVVEKEMYDFNDKGGRHI 76

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELP-----VRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
           AL+P    G   V    +++    P       +    S++R E   +     R R F Q 
Sbjct: 77  ALRP---EGTAGVVRSYVENKMYGPDVVKPFNVYYIESMFRYERPQA----GRQREFHQI 129

Query: 390 DAHVFCTK---------------------------------EQMFNECLKIHNLIISIYK 416
               F +                                  E +            +  K
Sbjct: 130 GCESFGSNNPLADIETIMMGNDLLNKLGVKNFELHINSLGNEVVRKAYHDALINYFTPVK 189

Query: 417 DFGFEKIMVKLSTRPEKRVGS----------------DALWDDAENIMKGVLDTIKNSS- 459
           D   E    +L   P + + S                D L D+++   K + D +     
Sbjct: 190 DQLSEDSQRRLMKNPLRILDSKEEQDKQFLPDAPRIVDYLDDESKANFKFITDALDKLGI 249

Query: 460 QDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCH 519
           +  ++  ++ G   + G  FE+++ D          +              V        
Sbjct: 250 KYVLDDDLVRGLDYYTGVIFEFMVADTDLWASPTTVLGGGRYN------HLVEEFGGPET 303

Query: 520 PVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHH 579
           P +     FG  E  + +++E     L    S I   +T I       + E+A  L++  
Sbjct: 304 PAV----GFGIGEERLMLVLEKQNPEL-FADSGIDFFITNIGEGTALKSVELARKLRAQG 358

Query: 580 LSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLD 636
             ++ D   + +  + ++        +I  G+KE +E ++ I+R       K+S  +
Sbjct: 359 QRVQYDVDQKKLKNQFKKADRVHAEFVITLGEKELAEGNVSIKRLADGKQIKLSWDE 415


>gi|116617672|ref|YP_818043.1| alanyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|122272127|sp|Q03YQ2|SYA_LEUMM RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|116096519|gb|ABJ61670.1| alanyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
          Length = 893

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 58/133 (43%), Gaps = 10/133 (7%)

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPIIEDGF-YYDFDKEQPFSSDELAQIEKKMQEIIAR 132
            H+  H++ ++++++        G ++E  +  +DF+ E P SS++L +IE  M + IA+
Sbjct: 580 NHTATHMLDQSLRNVLGGDVHQAGSLVEPEYLRFDFNNEGPVSSEDLDKIESMMNQEIAK 639

Query: 133 DSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR-GPHVRST 191
           + P        E A++L        K          + V +   G++      G H  ST
Sbjct: 640 NLPVTWLETDIESAKKLGAVAVFGEKY--------GDQVRVVSIGDFNKEFDGGTHANST 691

Query: 192 GQVKKFFKLMKVA 204
            ++  F  + +  
Sbjct: 692 AELGLFKIVSESG 704


>gi|187776522|ref|ZP_02992995.1| hypothetical protein CLOSPO_00019 [Clostridium sporogenes ATCC
           15579]
 gi|187775181|gb|EDU38983.1| hypothetical protein CLOSPO_00019 [Clostridium sporogenes ATCC
           15579]
          Length = 426

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/236 (16%), Positives = 84/236 (35%), Gaps = 22/236 (9%)

Query: 220 IYGTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWK 274
             G       E+  +    +   E + H  +   +++          GS   F+   G +
Sbjct: 115 PDGETDEDNVEIRNWSEPTKFDFEPKAHWDIGTNLNILDFERAGKVTGSRFTFYKGLGAR 174

Query: 275 IFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           + + +ISY      +   Y EI  P ++++     +G    +  + F +   D       
Sbjct: 175 LERAVISYFLDTHTEKHGYTEILPPYMVNRTSMIGTGQLPKFEEDAFKISEDD------- 227

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQD 389
            + L P        ++   +    ELP++   + + +R+E   +     GL+R   F + 
Sbjct: 228 -YFLIPTAEVPVTNLYRDEILKGDELPLKHVAYSACFRSEAGSAGRDTRGLVRQHQFNKV 286

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALW 441
           +   F   EQ + E  K+ N   ++ K+ G    +V++                +W
Sbjct: 287 ELVKFTKPEQSYEELEKLTNDAETVLKELGIPYRVVRICKGDLGFTAALKYDLEVW 342


>gi|325144922|gb|EGC67206.1| seryl-tRNA synthetase [Neisseria meningitidis M01-240013]
 gi|325205599|gb|ADZ01052.1| seryl-tRNA synthetase [Neisseria meningitidis M04-240196]
          Length = 431

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 64/188 (34%), Gaps = 11/188 (5%)

Query: 273 WKIFQTLISYMRRK--IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M     ++  Y E  TP ++D    Q +G    +  ++F V    D  K 
Sbjct: 171 ARLHRALAQFMLDTHTLQHGYTEHYTPYIVDDTTLQGTGQLPKFAEDLFHVTRGGDETKT 230

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
            +     P             +    +LP++L      +R+E         GL+R   F 
Sbjct: 231 TQYLI--PTAEVTLTNTVADSIIPSEQLPLKLTAHSPCFRSEAGSYGKDTRGLIRQHQFD 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E+ +    ++     +I K       ++ L T              +W  
Sbjct: 289 KVEMVQIVHPEKSYEALEEMVGHAENILKALELPYRVITLCTGDMGFGATKTYDLEVWVP 348

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 349 AQNTYREI 356


>gi|315452620|ref|YP_004072890.1| seryl-tRNA synthetase [Helicobacter felis ATCC 49179]
 gi|315131672|emb|CBY82300.1| seryl-tRNA synthetase [Helicobacter felis ATCC 49179]
          Length = 419

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/222 (13%), Positives = 77/222 (34%), Gaps = 20/222 (9%)

Query: 242 EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINT 296
           E ++H  LA++              S       +G  + + L ++M        +E ++ 
Sbjct: 137 EPQEHHILAQKNGWIEFERAVKISKSRFNVLRARGALVHRALANFMLDSNASRGFEIVSP 196

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +++      +G    ++ ++F ++          +  L P +      ++   +    
Sbjct: 197 PVIVNTTTLFGTGQLPKFQEDLFKIED--------ESLYLIPTSEVSLTNLYADEILRVE 248

Query: 357 ELPVRLAEFGSVYRNE---PSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           +LP+ +      +R E    S   HG++R   F + +       ++  +   K+     +
Sbjct: 249 DLPIMMTACTPCFRKEAGSASKDTHGMIRQHQFDKVELVAITHPDESAHMQEKMLEAASA 308

Query: 414 IYKDFGFEKIMVKLSTRPEKRVGSD----ALWDDAENIMKGV 451
           I          V+L +       S+     +W   +N  + +
Sbjct: 309 ILCALELPHRFVQLCSGDLGFSASNTVDIEVWLPGQNCYREI 350


>gi|294793973|ref|ZP_06759110.1| alanine--tRNA ligase [Veillonella sp. 3_1_44]
 gi|294455543|gb|EFG23915.1| alanine--tRNA ligase [Veillonella sp. 3_1_44]
          Length = 871

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/147 (19%), Positives = 55/147 (37%), Gaps = 8/147 (5%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFS 115
             + +    + R+     H+  H++  A++ +  E     G  +  D   +DF    P +
Sbjct: 538 DDVTLEVDTNRRAAMARNHTATHLLHAALKKVLGEHVNQAGSLVTPDYLRFDFTHFSPVT 597

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            +EL QIE  + E I + +      +S ++A+          K   +  +          
Sbjct: 598 QEELDQIEALVNEEILKATDLAIAEMSMDEAKAKGAMALFGDKYGDVVRVVEVP------ 651

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLMK 202
            G   +LC G HV +T  +  F    +
Sbjct: 652 -GFSVELCGGSHVGNTAFIGSFRLTSE 677


>gi|227431712|ref|ZP_03913742.1| histidyl-tRNA synthetase [Leuconostoc mesenteroides subsp. cremoris
           ATCC 19254]
 gi|227352536|gb|EEJ42732.1| histidyl-tRNA synthetase [Leuconostoc mesenteroides subsp. cremoris
           ATCC 19254]
          Length = 433

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 65/424 (15%), Positives = 142/424 (33%), Gaps = 64/424 (15%)

Query: 267 FWHRKGWK--IFQTLISYMRRKIKD-------DYEEINTPQVLDQHLWQQSGHWDSYRAN 317
           F   KG    + Q  + +   +          +++EI TP   +  ++ +S       ++
Sbjct: 6   FQRPKGTADLLPQKTVQWQHVEAVARVLFGDYNFKEIRTPLFENFEVFSRS---AGDTSD 62

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAVF--NHGLKSYRELPVRLAEFGSVYRNEPSG 375
           +   +  D   K  R  AL+P    G V  +  N       + P +    G ++R E   
Sbjct: 63  VVTKEMYDFHDKGDRHIALRPEGTAGVVRAYVENKLYGPEFDKPYKAFYMGPMFRYERPQ 122

Query: 376 SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV 435
           +     R R F Q  A +F +     +   ++  ++I  ++  G + +  K++       
Sbjct: 123 A----GRFRQFHQIGAEIFGSDSPALDA--EVIAMVIDFFQTLGLKNL--KVAINTLGDK 174

Query: 436 GSDALWDDA-ENIMKGVLDTIKNSSQDRINTGVL-------LGEGAF--YGPKF-EYILK 484
            S   +  A  + +K   D +   SQ R+    L         +  F    P   +++ +
Sbjct: 175 ESRDAYRQALIDYLKPHFDELSADSQARLEKNPLRVLDSKDPRDQLFVADAPSILDFLSE 234

Query: 485 DAIGRDWQCGTI----------------QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVF 528
            +     +   I                 +D+   + F     +   +    +       
Sbjct: 235 KSTKHWEKLQDILTALNLDFDIDTTMVRGLDYYNDTIFEIMTTDESLKGAATIAGGGRYS 294

Query: 529 GSIERF---------IGIMIE---NFKGNLPLWLSPIQ---AIVTTITSSAVEYAQEIAN 573
           G +E F          GI +E   +      +  +  Q     V  I  +    A +I  
Sbjct: 295 GLVEEFGGPETPGVGFGIGVERLLDLLQAQNVAPTEEQNLDFYVVNIGDTTDVIATKIVQ 354

Query: 574 LLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS 633
            ++S     E D+ +++   + +         +I  G++E  E+ + I+   +   + V 
Sbjct: 355 AVRSFGYVAERDYLSKSAKAQFKAADRHHAKYVITIGEQELEEQIVNIKNMTNGEQKSVQ 414

Query: 634 LLDA 637
           L + 
Sbjct: 415 LSEL 418


>gi|225859879|ref|YP_002741389.1| histidyl-tRNA synthetase [Streptococcus pneumoniae 70585]
 gi|254782347|sp|C1CAV1|SYH_STRP7 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|225721003|gb|ACO16857.1| histidyl-tRNA synthetase [Streptococcus pneumoniae 70585]
          Length = 429

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 61/404 (15%), Positives = 127/404 (31%), Gaps = 56/404 (13%)

Query: 276 FQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           +Q +  + R   K  +Y E+ TP       ++          ++   +  D   K  R  
Sbjct: 20  WQYVEGFAREIFKRYNYAEVRTPIF---EHYEVISRSVGDTTDIVTKEMYDFYDKGDRHI 76

Query: 335 ALKPMNCPGHVAVFNHGLKS-----YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
            L+P    G   V    +++       + P +    G ++R E   +     R+R F Q 
Sbjct: 77  TLRP---EGTAPVVRSYVENKLFAPEVQKPSKFYYMGPMFRYERPQA----GRLRQFHQI 129

Query: 390 DAHVFCTKEQM-FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWD------ 442
               F +       E + +    +      G +  +  L     +     AL D      
Sbjct: 130 GVECFGSSNPATDVETIVMAAHFLKEIGIQGVKLHLNTLGNPESRAAYRQALIDYLTPLK 189

Query: 443 -----DAENIMKG----VLDTIKNSSQDR-------INTGVLLGEGAFYGPK-------F 479
                D++  ++     VLD+ +   +         ++      +  F   +        
Sbjct: 190 ETLSKDSQRRLEENPLRVLDSKEKEDKVAVENAPSILDFLDEESQTHFDAVRQMLENLGV 249

Query: 480 EYILKDAI--GRDWQCGTIQVDFNLPSRFNAFYVN---SHSEKCHPVMIHRAVFG---SI 531
           +YI+   +  G D+   TI          +              +      A FG    +
Sbjct: 250 DYIIDTNMVRGLDYYNHTIFEFITEIEGNDLTVCAGGRYDGLVAYFGGPETAGFGFGLGV 309

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           ER + I+    +G      + +   +  +   A   A E+   L+      E D+ N  +
Sbjct: 310 ERLLLIL--EKQGVALPIENALDVYIAVLGDGANVKALELVQALRQQGFKAERDYLNRKL 367

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
             + +   +     +I  G+ E   R + ++   +    +VSL 
Sbjct: 368 KAQFKSADVFAAKTLITLGESEVESRQVTVKNNQTREEVQVSLE 411


>gi|189025892|ref|YP_001933664.1| uridine kinase [Treponema pallidum subsp. pallidum SS14]
 gi|189018467|gb|ACD71085.1| uridine kinase [Treponema pallidum subsp. pallidum SS14]
          Length = 555

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/172 (19%), Positives = 70/172 (40%), Gaps = 4/172 (2%)

Query: 56  EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFS 115
           +  +E +  +     A+ R +   + A A  S++P V++  G  ++ G+ Y    E   +
Sbjct: 59  DAVVEPVREDTVLGAALYRRTARLLFATAFHSVYPHVRLFAGYRVQGGYCYRT--EGACA 116

Query: 116 SD-ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLY 174
            D +++ + ++M+ ++A+D+P   QY++ ++A  LF      Y    +        +T  
Sbjct: 117 DDLDVSLVVRRMKALVAQDAPIHMQYMTRQEALNLFTQWNFPYSHHYILGSYRTVFLTQV 176

Query: 175 RQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWN 226
             G +  L   P + S G++  F   M   G   R              A  
Sbjct: 177 LDG-FSALFFQPLMASVGRLTVFEVRMCAEGCLLRFPEGGQRHIISQHNASP 227


>gi|159107810|ref|XP_001704181.1| Uridine kinase [Giardia lamblia ATCC 50803]
 gi|157432235|gb|EDO76507.1| Uridine kinase [Giardia lamblia ATCC 50803]
          Length = 582

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 71/208 (34%), Gaps = 10/208 (4%)

Query: 4   DIKLT-FPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVR-EGSIEI 61
            I LT  P G               +     +   A+A  +N ++  L++ +    +IE 
Sbjct: 24  PITLTYLPTGQQITTKSEIPVGQALKVFDPEI--NAIAALVNNEILSLNEKLDISSTIEP 81

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQ 121
           I  +   +  +   S    +  A   ++    +    I+++  ++ F  +   + D+L  
Sbjct: 82  IFFKGEYARQIFCDSFTVALQAAATKLFRGQALECCYIMQNARFFKF-TDMALTRDDLDA 140

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKEN--VTLYRQGEW 179
           ++  + +I   D    +  +S   A    +         +L SI   +     +Y +   
Sbjct: 141 LKALLIDISDADLKISRTTVSFNDALHYLKEIHHKGSCNLLTSINTSKVSMARIYSKELS 200

Query: 180 FDLCR---GPHVRSTGQVKKFFKLMKVA 204
            D           STG + K    MK+ 
Sbjct: 201 IDFRTLWISTLAPSTGVLGKNLWTMKLH 228


>gi|313886826|ref|ZP_07820531.1| serine--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I]
 gi|332299470|ref|YP_004441391.1| seryl-tRNA synthetase [Porphyromonas asaccharolytica DSM 20707]
 gi|312923716|gb|EFR34520.1| serine--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I]
 gi|332176533|gb|AEE12223.1| seryl-tRNA synthetase [Porphyromonas asaccharolytica DSM 20707]
          Length = 424

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 73/205 (35%), Gaps = 16/205 (7%)

Query: 238 LEESEKRDHRKLAREMDLFHIA----EDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYE 292
           LE + K  H +LA++ DL          G+G   +  +G ++ + LI++ + R     ++
Sbjct: 136 LENTAKLPHWELAKQYDLIDFELGVKITGAGFPVYKGRGARLQRALINFFLDRATAAGFQ 195

Query: 293 EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           E+  P ++++                   K        L    L P        +F   +
Sbjct: 196 EVEPPIMVNE--------ASGIGTGQLPDKEGQMYHAQLDNLYLIPTAEVPVTNIFRDVI 247

Query: 353 KSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
               +LPV    +   +R E       + GL R+  F + +       +  + +  K+  
Sbjct: 248 LEADQLPVCCTAYTPCFRREAGSYGKDVRGLNRLHQFDKVEIVSIDRPDHSWQQLDKMIA 307

Query: 410 LIISIYKDFGFEKIMVKLSTRPEKR 434
            + S+ ++      +++L       
Sbjct: 308 HVKSLVEELELPYRILRLCGGDLSF 332


>gi|258508557|ref|YP_003171308.1| histidyl-tRNA synthetase [Lactobacillus rhamnosus GG]
 gi|257148484|emb|CAR87457.1| Histidyl-tRNA synthetase [Lactobacillus rhamnosus GG]
 gi|259649864|dbj|BAI42026.1| histidyl-tRNA synthetase [Lactobacillus rhamnosus GG]
          Length = 427

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 63/431 (14%), Positives = 132/431 (30%), Gaps = 65/431 (15%)

Query: 265 VIFWHRKGWK-I-------FQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYR 315
           + +   KG   I       +Q + +  R+   +  Y EI TP   +  ++ +S       
Sbjct: 1   MNYQRPKGTADILPGQSERWQQVEAVARKIFAQYQYREIRTPIFENVDVFSRS---VGDT 57

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF--NHGLKSYRELPVRLAEFGSVYRNEP 373
           +++   +      K  R  AL+P    G V  +  N         P ++   G ++R E 
Sbjct: 58  SDIVTKEMYTFEDKGDRMMALRPEGTAGVVRAYVENKLYGPEYAKPYKVYYMGPMFRYER 117

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH----------NLIISIYKDFGFEKI 423
             S     R R F Q     F +   + +                  +  +    G    
Sbjct: 118 PQS----GRQRQFHQIGVEAFGSDSPVLDAETLALAKQLLEALGAKHLKFVINSLGDPAT 173

Query: 424 MVKLSTRPEKRVG--SDALWDDAENIMKG----VLD-------TIKNSSQDRINTGVLLG 470
                      +    D L +D++  +      +LD        I   +   ++      
Sbjct: 174 RKAFHAALVDYLTPFKDELSEDSKVRLVKNPLRILDSKDKHDQEIVADAPSILDYLTPEA 233

Query: 471 EGAFYGPK-------FEYILKDAI--GRDWQCGTIQVDFNLPSRFNAFYVN------SHS 515
           +  F   K        E+ +   +  G D+   TI    +    F   Y         + 
Sbjct: 234 QQHFDRVKSLLTGLGIEFEVDATMVRGLDYYNHTIFEVMSDDKVFGGGYTTILAGGRYNG 293

Query: 516 ---EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIA 572
              E   P          +ER + +M  + +   P       A + TI   A + A ++ 
Sbjct: 294 LVEELGGPETPGIGFAMGVERLMLLMQGDQQPVQPD------AYIVTIDQGADQEALQML 347

Query: 573 NLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
             L+    + E D+       + +  +     +++  G+ E    ++ ++   +   +  
Sbjct: 348 TALRQQGFTGEMDYMGRKAKGQFKAANKANAKLVLTIGESEREAGTVQVKNMATGQQKAF 407

Query: 633 SLLDAIPILTK 643
              D +   +K
Sbjct: 408 PQADVLADFSK 418


>gi|255994094|ref|ZP_05427229.1| alanine--tRNA ligase [Eubacterium saphenum ATCC 49989]
 gi|255993762|gb|EEU03851.1| alanine--tRNA ligase [Eubacterium saphenum ATCC 49989]
          Length = 878

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 41/244 (16%), Positives = 91/244 (37%), Gaps = 17/244 (6%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKM 126
           R+ A+  H+  H+M  A++ +  +     G  +  DG  +D + ++P S +EL  IE  +
Sbjct: 564 RNAAMANHTATHLMHAALRELISKDITQAGSKVSCDGLRFDINYKKPLSYEELRDIEVWV 623

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGP 186
            + IA   P  K+ +  ++A +          + +       +   +  +    +LC G 
Sbjct: 624 NDRIASWLPVTKRIMKKDEAIKSGA-------IGLFSDKYKDDVRVVSIEDASSELCGGL 676

Query: 187 HVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQEL--TQYLYFLEESEKR 244
           HV +TG +  F  + + A       S    +  I G A +        +       ++ +
Sbjct: 677 HVDNTGYIGSFKIVKESA-----VSSGTRRIEAITGRAASNYLLQLDAEKKKLESLTKTQ 731

Query: 245 DHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHL 304
           D     +   L+   +D    +   +KG +    +   +  K  +   +  +  + D  +
Sbjct: 732 DGNIYDKVQKLYSEIKDLKADLSKLKKG-RASDDISGSIEIKDVEG-VKFGSAILGDMEI 789

Query: 305 WQQS 308
               
Sbjct: 790 PDMK 793


>gi|199599331|ref|ZP_03212729.1| Histidyl-tRNA synthetase [Lactobacillus rhamnosus HN001]
 gi|229552367|ref|ZP_04441092.1| histidine--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
 gi|258539738|ref|YP_003174237.1| histidyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705]
 gi|199589770|gb|EDY97878.1| Histidyl-tRNA synthetase [Lactobacillus rhamnosus HN001]
 gi|229314269|gb|EEN80242.1| histidine--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
 gi|257151414|emb|CAR90386.1| Histidyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705]
          Length = 427

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 63/431 (14%), Positives = 132/431 (30%), Gaps = 65/431 (15%)

Query: 265 VIFWHRKGWK-I-------FQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYR 315
           + +   KG   I       +Q + +  R+   +  Y EI TP   +  ++ +S       
Sbjct: 1   MNYQRPKGTADILPGQSERWQQVEAVARKIFAQYQYREIRTPIFENVDVFSRS---AGDT 57

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF--NHGLKSYRELPVRLAEFGSVYRNEP 373
           +++   +      K  R  AL+P    G V  +  N         P ++   G ++R E 
Sbjct: 58  SDIVTKEMYTFEDKGDRMMALRPEGTAGVVRAYVENKLYGPEYAKPYKVYYMGPMFRYER 117

Query: 374 SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH----------NLIISIYKDFGFEKI 423
             S     R R F Q     F +   + +                  +  +    G    
Sbjct: 118 PQS----GRQRQFHQIGVEAFGSDSPVLDAETLALAKQLLEALGAKHLKFVINSLGDPAT 173

Query: 424 MVKLSTRPEKRVG--SDALWDDAENIMKG----VLD-------TIKNSSQDRINTGVLLG 470
                      +    D L +D++  +      +LD        I   +   ++      
Sbjct: 174 RKAFHAALVDYLTPFKDELSEDSKVRLVKNPLRILDSKDKHDQEIVADAPSILDYLTPEA 233

Query: 471 EGAFYGPK-------FEYILKDAI--GRDWQCGTIQVDFNLPSRFNAFYVN------SHS 515
           +  F   K        E+ +   +  G D+   TI    +    F   Y         + 
Sbjct: 234 QQHFDRVKSLLTGLGIEFEVDATMVRGLDYYNHTIFEVMSDDKVFGGGYTTILAGGRYNG 293

Query: 516 ---EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIA 572
              E   P          +ER + +M  + +   P       A + TI   A + A ++ 
Sbjct: 294 LVEELGGPETPGIGFAMGVERLMLLMQGDQQPVQPD------AYIVTIDQGADQEALQML 347

Query: 573 NLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
             L+    + E D+       + +  +     +++  G+ E    ++ ++   +   +  
Sbjct: 348 TALRQQGFTGEMDYMGRKAKGQFKAANKANAKLVLTIGESEREAGTVQVKNMATGQQKAF 407

Query: 633 SLLDAIPILTK 643
              D +   +K
Sbjct: 408 PQADVLADFSK 418


>gi|329724156|gb|EGG60674.1| serine--tRNA ligase [Staphylococcus epidermidis VCU144]
          Length = 428

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 46/330 (13%), Positives = 105/330 (31%), Gaps = 32/330 (9%)

Query: 137 LKQYLSH-EKARELFESKKEAYKVEILESIPAKENVTLYRQ-GEWFDLCRGPHVRSTGQV 194
            ++ +S  E+ +       E    +      A + +   R  G+              ++
Sbjct: 38  RRELISKTEEMKAKRNKVSEEIAQKKRNKEDADDVIAEMRHLGDEIKDIDNQLNEVDNKI 97

Query: 195 K----KFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLA 250
           +    +   L+         D     + + +GT  + + E   +   +EE +  D  + A
Sbjct: 98  RDILIRIPNLINEDVPQGASDEENVEVKK-WGTPRDFEFEPKAHWDLVEELKMADFERAA 156

Query: 251 REMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQS 308
           +      +             G  + + L++YM  K   +  Y E+ TPQ+++      +
Sbjct: 157 KVSGARFVYLTK--------DGALLERALMNYMLTKHTTQHGYTEMMTPQLVNADTMFGT 208

Query: 309 GHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSV 368
           G    +  ++F V        +       P         +   +     LP       + 
Sbjct: 209 GQLPKFEEDLFKV--------EKEGLYTIPTAEVPLTNFYRDEIIQPGVLPELFTAQTAC 260

Query: 369 YRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
           +R+E   +     GL+R+  F + +       E  ++   ++     +I ++ G     V
Sbjct: 261 FRSEAGSAGRDTRGLIRLHQFDKVEMVRIVQPEDSWDALEEMTQNAEAILEELGLPYRRV 320

Query: 426 KLSTRPEKR----VGSDALWDDAENIMKGV 451
            L T              +W  + N  K +
Sbjct: 321 ILCTGDIGFSASKTYDLEVWLPSYNDYKEI 350


>gi|326529173|dbj|BAK00980.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 511

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 40/232 (17%), Positives = 86/232 (37%), Gaps = 19/232 (8%)

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIA--EDGSGVIFWHRKGWKIFQT- 278
           G   ++                +DH +L +++DLF      + SG  F++ K   +    
Sbjct: 182 GDEESSVTRKEVGSQRNFSFTIKDHLQLGKDLDLFDFDAASEVSGSKFYYLKNEAVLLEM 241

Query: 279 -LISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFAL 336
            L+++ +    K  +  + TP+++   + ++ G     RA    V   D++ + L   A 
Sbjct: 242 ALVNWGIAEVSKKGFTPLITPEIVRSSVVERCGFQP--RAQNTQVYSIDNSDQCLIGTAE 299

Query: 337 KPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHV 393
            P+      ++         +LP++   +   +R E   +     GL RV  F++ +  +
Sbjct: 300 IPVGGIHINSILPD-----SDLPLKYVAYSHCFRTEAGAAGAATRGLYRVHQFSKVEMFI 354

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFE----KIMVKLSTRPEKRVGSDALW 441
           FC  E+      ++  +  ++Y   G       +       P  R      W
Sbjct: 355 FCRPEESDKYHEELITIEENLYASLGLHFKTLDMATGDLGAPAYRKYDIEAW 406


>gi|325134782|gb|EGC57419.1| seryl-tRNA synthetase [Neisseria meningitidis M13399]
          Length = 431

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 64/188 (34%), Gaps = 11/188 (5%)

Query: 273 WKIFQTLISYMRRK--IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M     ++  Y E  TP ++D    Q +G    +  ++F V    D  K 
Sbjct: 171 ARLHRALAQFMLDTHTLQHGYTEHYTPYIVDDTTLQGTGQLPKFAEDLFHVTRGGDETKT 230

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
            +     P             +    +LP++L      +R+E         GL+R   F 
Sbjct: 231 TQYLI--PTAEVTLTNTVADSIIPSEQLPLKLTAHSPCFRSEAGSYGKDTRGLIRQHQFD 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E+ +    ++     +I K       ++ L T              +W  
Sbjct: 289 KVEMVQIVHPEKSYEALEEMVGHAENILKALELPYRVITLCTGDMGFGAAKTYDLEVWVP 348

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 349 AQNTYREI 356


>gi|256822347|ref|YP_003146310.1| seryl-tRNA synthetase [Kangiella koreensis DSM 16069]
 gi|256795886|gb|ACV26542.1| seryl-tRNA synthetase [Kangiella koreensis DSM 16069]
          Length = 422

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/246 (15%), Positives = 86/246 (34%), Gaps = 17/246 (6%)

Query: 220 IYGTAWNTQQELTQYLYFLEES-EKRDHRKLARE-MDL-FHIAEDGSGVIFWHRKG--WK 274
             G   N   E+ ++    +   E +DH ++      L F  A   +   F  +KG   K
Sbjct: 112 PEGKDENDNVEIRRWGEPRQFDFEPKDHVEVGEGLSGLDFASAAKIAASRFIVKKGLVAK 171

Query: 275 IFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           + + LI +M      +  YEE+  P +++      +G    +  ++F  +  +   +D R
Sbjct: 172 LHRALIQFMLDLHSKEHGYEEVYVPYMVNAESLTGTGQLPKFEEDLFKAQGKN---QDDR 228

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQD 389
              L P        +    +    +LP++       +R+E       + GL+R+  F + 
Sbjct: 229 PLYLIPTAEVPVTNLVRDEIIEADQLPLQFVAHTPCFRSEAGSYGRDVRGLIRLHQFEKV 288

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAE 445
           +       E       ++      + +       +V L +              +W  ++
Sbjct: 289 ELVHIAKPEDSMEALERLIGHAEKVLQLLELPYRVVTLCSGDIGFGATKTYDIEVWLPSQ 348

Query: 446 NIMKGV 451
           +  + +
Sbjct: 349 DTYREI 354


>gi|262202241|ref|YP_003273449.1| histidyl-tRNA synthetase [Gordonia bronchialis DSM 43247]
 gi|262085588|gb|ACY21556.1| histidyl-tRNA synthetase [Gordonia bronchialis DSM 43247]
          Length = 421

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 63/421 (14%), Positives = 122/421 (28%), Gaps = 77/421 (18%)

Query: 274 KIFQTLISYMRRKIKDDYEEINTPQVLDQHLWQQS--GHWDSYRANMFAVKCADDTIKDL 331
           ++  TL    RR     Y  I  P   D  L+ +      D     M+      D     
Sbjct: 24  RVRDTLTDAARR---AGYGHIELPVFEDTALFARGVGESTDVVSKEMYTFADRGD----- 75

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
           R+  L+P    G +           +LPV+L+  G  +R E   +     R R   Q   
Sbjct: 76  RSVTLRPEGTAGVMRAVIQHGLDRGQLPVKLSYAGPFFRYEKPQT----GRYRQLQQVGV 131

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKG- 450
                 +   +   ++  +    Y+  G     +++       +G D         ++  
Sbjct: 132 EAIGVDDPALDA--EVIAVADEGYRRLGLSGFRLEI-----TSLGDDESRPRYREALQQF 184

Query: 451 --------------------VLD----TIKNSSQDR---INTGVLLGEGAF--------- 474
                               VLD     IK ++ D    I+         F         
Sbjct: 185 LFGLDLDEPTRQRAQLNPLRVLDDKRPEIKAATADAPLLIDYLSDDARAHFELVLAHLDR 244

Query: 475 ----YGPK------FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIH 524
               Y          +Y  K            Q       R++        ++    +  
Sbjct: 245 LGVPYELNSRLVRGLDYYTKTTFEFVHDGLGAQSGIGGGGRYDGLMRQLGGKQDLSGI-- 302

Query: 525 RAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIET 584
               G     + +  E   G      +  Q     + ++A      +A  L++  +S++ 
Sbjct: 303 GFGLGVDRTMLALEAEGVAGTEA---ARCQVFGVPLGTAAKAELVGVAGQLRAAGISVDL 359

Query: 585 --DFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
               R      K  + S  KI   ++ GD+E  +R + ++       Q+V + D +  + 
Sbjct: 360 AYGDRGLKGAMKAADRSGAKIA--LVLGDREIEQRVVEVKNLTDGVQQQVCIDDVVGQVQ 417

Query: 643 K 643
           +
Sbjct: 418 R 418


>gi|329298236|ref|ZP_08255572.1| seryl-tRNA synthetase [Plautia stali symbiont]
          Length = 430

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 60/188 (31%), Gaps = 10/188 (5%)

Query: 273 WKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M      +  Y E   P +++      +G    +  ++F  K   +    
Sbjct: 170 ARLHRALSQFMIDLHSQQHGYLETYVPYLVNHETLYGTGQLPKFGEDLFHTKPLGEEAG- 228

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
              +AL P        +    +     LP++L      +R+E         GL+R+  F 
Sbjct: 229 SSNYALIPTAEVPLTNLVRDEIVEEESLPIKLTAHTPCFRSEAGSYGRDTRGLIRMHQFD 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E   +   ++      + +        V L T              +W  
Sbjct: 289 KVEMVQIVAPETSMDALEELVGHAEKVLQLLNLPYRKVLLCTGDMGFGSAKTYDLEVWLP 348

Query: 444 AENIMKGV 451
           A++  + +
Sbjct: 349 AQDTYREI 356


>gi|317495625|ref|ZP_07953992.1| seryl-tRNA synthetase [Gemella moribillum M424]
 gi|316914244|gb|EFV35723.1| seryl-tRNA synthetase [Gemella moribillum M424]
          Length = 426

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 40/223 (17%), Positives = 85/223 (38%), Gaps = 21/223 (9%)

Query: 242 EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRR--KIKDDYEEIN 295
           E + H  L  E+D+          GS  +F+ + G  + + LI++M     I+  YEE  
Sbjct: 136 EPKAHWDLVEELDIADFERAAKISGSRFVFYKKAGALLERALINFMIDTHVIEHGYEEYM 195

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
            PQ++++     +G +  +  +++ V+    T+         P         +N+ + S 
Sbjct: 196 VPQLVNKTALFGTGQFPKFVEDVYTVESEGLTLI--------PTAEVPLTNYYNNEILSE 247

Query: 356 RELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
             LP  +  F   +R+E   +     GL+R+  F + +   F   E  + +   +     
Sbjct: 248 DMLPKGVTAFSICFRSEAGSAGRDTRGLIRLHQFNKVEMVRFAKPENSYEQLEIMTEHAE 307

Query: 413 SIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
           +I K       ++ L +              +W  + +  K +
Sbjct: 308 NILKKLNLPYRVITLCSGDTGFSSAKTYDIEVWLPSYDAYKEI 350


>gi|282850479|ref|ZP_06259858.1| alanine--tRNA ligase [Veillonella parvula ATCC 17745]
 gi|282579972|gb|EFB85376.1| alanine--tRNA ligase [Veillonella parvula ATCC 17745]
          Length = 871

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/147 (19%), Positives = 55/147 (37%), Gaps = 8/147 (5%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFS 115
             + +    + R+     H+  H++  A++ +  E     G  +  D   +DF    P +
Sbjct: 538 DDVTLEVDTNRRAAMARNHTATHLLHAALKKVLGEHVNQAGSLVTPDYLRFDFTHFSPVT 597

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            +EL QIE  + E I + +      +S ++A+          K   +  +          
Sbjct: 598 QEELDQIEALVNEEILKATDLAIAEMSMDEAKAKGAMALFGDKYGDVVRVVEVP------ 651

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLMK 202
            G   +LC G HV +T  +  F    +
Sbjct: 652 -GFSVELCGGSHVGNTAFISSFRLTSE 677


>gi|39997334|ref|NP_953285.1| GTP pyrophosphokinase [Geobacter sulfurreducens PCA]
 gi|39984225|gb|AAR35612.1| GTP pyrophosphokinase [Geobacter sulfurreducens PCA]
 gi|298506271|gb|ADI84994.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA [Geobacter
           sulfurreducens KN400]
          Length = 716

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 1/63 (1%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI-E 60
           P ++ +  P G +K+FP  +T  D+A +I   +  + V   +NGK+  L   ++ G I E
Sbjct: 384 PEEVYVFTPRGDVKSFPKGSTPIDLAYTIHTDIGHRCVGAKVNGKLVPLKYELKNGDIVE 443

Query: 61  IIT 63
           +IT
Sbjct: 444 VIT 446


>gi|332974398|gb|EGK11324.1| serine--tRNA ligase [Psychrobacter sp. 1501(2011)]
          Length = 432

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 62/188 (32%), Gaps = 11/188 (5%)

Query: 273 WKIFQTLISYM--RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + LI +M     +K  Y E   P +++    + +G    +       K  + T  D
Sbjct: 170 AQLHRALIQFMLNTHTVKYGYTECYVPYIVNSDSLKGTGQLPKF--EEDLFKLTNHTNND 227

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFT 387
              F L P        +         +LP++       +R+E         GL+R   F 
Sbjct: 228 GMGFYLIPTAEVPMTNLVRGERLDASQLPLKFTAHTPCFRSEAGSHGRDTRGLIRQHQFE 287

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK----RVGSDALWDD 443
           + +     T  Q      ++      I +       +VKL T        R     +W  
Sbjct: 288 KVEMVNIATAAQSDELLEQMTAQAEYILQQLELPYRVVKLCTGDMGFSALRTYDIEVWLP 347

Query: 444 AENIMKGV 451
           +++  + +
Sbjct: 348 SQDTYREI 355


>gi|315644417|ref|ZP_07897550.1| seryl-tRNA synthetase [Paenibacillus vortex V453]
 gi|315280167|gb|EFU43460.1| seryl-tRNA synthetase [Paenibacillus vortex V453]
          Length = 427

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/213 (17%), Positives = 76/213 (35%), Gaps = 21/213 (9%)

Query: 242 EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEIN 295
           E + H +LA+ + +          GS   F+   G ++ + LIS+M     D   YEE+ 
Sbjct: 136 EPKAHWELAQNLGILDFEAGAKVTGSRFTFYKGLGARLERALISFMMDLHSDKHGYEEML 195

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
            P ++++     +G    +  ++F +   D        + L P             + + 
Sbjct: 196 PPYIVNRDSLYGTGQLPKFEEDLFKISDTD--------YYLIPTAEVPVTNYHREEILNI 247

Query: 356 RELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
            +LP     + S +R+E   +     GL+R   F + +       E  F+E  K+     
Sbjct: 248 EDLPKYYVAYSSCFRSEAGAAGRDTRGLIRQHQFNKVEMVKIVNPETSFDELEKMTTDAE 307

Query: 413 SIYKDFGFEKIMVKLSTRPEKR----VGSDALW 441
            + +       ++ L T              +W
Sbjct: 308 RVLQLLNLPYRVMALCTGDMGFGSMKTYDLEVW 340


>gi|284929416|ref|YP_003421938.1| histidyl-tRNA synthetase [cyanobacterium UCYN-A]
 gi|284809860|gb|ADB95557.1| histidyl-tRNA synthetase [cyanobacterium UCYN-A]
          Length = 432

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/227 (14%), Positives = 78/227 (34%), Gaps = 26/227 (11%)

Query: 420 FEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF 479
             K + K +      +G ++      + ++ +L  +  + Q  IN  ++ G   +    F
Sbjct: 213 KTKEINKNAPNILHFLGKESQ--KHFDEVQQLLTDLNINYQ--INPCLVRGLDYYTHTAF 268

Query: 480 EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI 539
           E    D +G                R++   +        P +         ER I ++ 
Sbjct: 269 EIQ-SDNLGTQSTVCG-------GGRYD-HLIEELGGTSTPAVGWAIGV---ERLIMLLK 316

Query: 540 ENFKGNLPLWLSPIQ---AIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
           +       +  SP       + +    A      +A  L+S  L +E D        + +
Sbjct: 317 Q-------IECSPQHNPDVYIVSKGKKAEAIGLYLAQKLRSEELIVELDMSGSNFGKQFK 369

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
                K  + I+ G++EA   ++ ++   +     ++ +D +  +T+
Sbjct: 370 RADRSKASVCIVLGEEEAENNTLQVKWLHTKEQNSMTQVDLLNHITE 416


>gi|282895590|ref|ZP_06303724.1| Histidyl-tRNA synthetase, class IIa [Raphidiopsis brookii D9]
 gi|281199430|gb|EFA74294.1| Histidyl-tRNA synthetase, class IIa [Raphidiopsis brookii D9]
          Length = 477

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 63/466 (13%), Positives = 136/466 (29%), Gaps = 90/466 (19%)

Query: 261 DGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDS---YRA 316
             SG   +     ++   L+  +R+  +   +  I TP V    + Q  G+      Y  
Sbjct: 11  TPSGFPEFLPGEKRLELYLLDTIRKVFESYGFTPIETPAVERLEVLQAKGNQGDNIIYGI 70

Query: 317 N--MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL--PVRLAEFGSVYRNE 372
              +   +  +           + +     V +  +  +   EL  P    +   V+R E
Sbjct: 71  EPILPPNRQLERDKSGETGAEARALKFDQTVPLAAYIARHLNELTFPFARYQMDMVFRGE 130

Query: 373 PSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE 432
            +       R R F Q D  V    +       ++  +I  I+        +++++ R  
Sbjct: 131 RAKD----GRFRQFRQCDIDVVGRDKLSLLYDAQMPAIITEIFAAINIGDFVIRINNRKI 186

Query: 433 ---------------------------------------------------KRVGSDALW 441
                                                              + +  D   
Sbjct: 187 LSGFFQSLGVAQEQIKTCIGIIDNLEKIGESQVQQELEKTGISLEQSQKIIEFINIDGNV 246

Query: 442 DDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFN 501
           DD  + +K +   +  +    +N GV   E    G K        +G   Q   I +   
Sbjct: 247 DDVLDKLKHLAVNLPQAEGFNLNLGVSELEAVIDGVK-------NLGVPAQRFCIDLSIA 299

Query: 502 LPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLW------------ 549
               +    V   +   H  +      G  E  +GI +      + +             
Sbjct: 300 RGLNYYTGTVYETTLIGHESLGSICSGGRYEELVGIFLGEKMPGVGISIGLSRLINRLLK 359

Query: 550 --------LSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIK 601
                    +P Q +V  I    +    +++  L+   +++ T+F  + +  + +    +
Sbjct: 360 ADILQKLPPTPAQVMVVNIQEDLMPIYLQVSQQLRRAGINVVTNFEKKQLGKQFQLADKQ 419

Query: 602 KIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKESLP 647
            I   +I G +EA+     ++   +    +V L +  P L +   P
Sbjct: 420 GIRFCVIIGSQEAANAKSCLKDLSTGEQIEVPLPNLAPTLQQILQP 465


>gi|254503029|ref|ZP_05115180.1| seryl-tRNA synthetase [Labrenzia alexandrii DFL-11]
 gi|222439100|gb|EEE45779.1| seryl-tRNA synthetase [Labrenzia alexandrii DFL-11]
          Length = 426

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/234 (16%), Positives = 80/234 (34%), Gaps = 22/234 (9%)

Query: 231 LTQYLYFLEESEKRDHRKLARE--MDLFHIAEDGSGVIFWHRKG--WKIFQTLISYMRRK 286
             +   F      ++H +L  E     F  A   SG  F   KG   ++ + L  +M   
Sbjct: 128 HGEKPAFTFNEAPKEHYELGEELGGMDFSTAAKLSGSRFVVLKGQIARLERALGQFMIDM 187

Query: 287 I--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGH 344
              ++ Y E++ P ++       +G    +  ++F         K      L P      
Sbjct: 188 HTQENGYTEVSPPLLVHSDPLYGTGQLPKFEEDLF---------KTATDHYLIPTAEVPL 238

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMF 401
             +    + S  +LP+R+      +R+E   +     G++R   F + +     T E+  
Sbjct: 239 TNLVAGEIMSEDQLPLRVTALTYCFRSEAGSAGRDTRGMLRQHQFQKCELVSVTTPEESL 298

Query: 402 NECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
           NE  ++      I +  G    ++ L T              +W   ++  + +
Sbjct: 299 NELERMLGCAEMILQKLGLHYRVMTLCTGDMGFGARKTYDIEVWLPGQDTFREI 352


>gi|317153777|ref|YP_004121825.1| RelA/SpoT family protein [Desulfovibrio aespoeensis Aspo-2]
 gi|316944028|gb|ADU63079.1| RelA/SpoT family protein [Desulfovibrio aespoeensis Aspo-2]
          Length = 726

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 1/58 (1%)

Query: 10  PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPED 66
           P G IK  P  AT  D A +I   +  K     +NG++  L  P++ G S+EIIT ++
Sbjct: 399 PSGDIKELPEGATPVDFAYAIHSEVGDKCAGAKVNGRIVPLHSPLKNGDSVEIITDKN 456


>gi|51598481|ref|YP_072669.1| alanyl-tRNA synthetase [Borrelia garinii PBi]
 gi|59798511|sp|Q662E4|SYA_BORGA RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|51573052|gb|AAU07077.1| alanyl-tRNA synthetase [Borrelia garinii PBi]
          Length = 594

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 55/130 (42%), Gaps = 10/130 (7%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           H+  H++ +A+Q +  +     G  I  +   +DF   +  + DE+ ++E+ +   I   
Sbjct: 456 HTATHLLHKALQLVLGDHVRQKGSNITAERLRFDFVHSEKMTDDEIKKVEEIVNLQIKNS 515

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTG 192
               K  +   +A++         K + L        V++Y    +  ++C GPHV +T 
Sbjct: 516 LSVKKSIMELSEAQKKGAMALFGEKYDNL--------VSVYEIDGFSLEVCGGPHVENTN 567

Query: 193 QVKKFFKLMK 202
           ++  F    +
Sbjct: 568 ELGTFKIQKE 577


>gi|327393325|dbj|BAK10747.1| seryl-tRNA synthetase SerS [Pantoea ananatis AJ13355]
          Length = 416

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 62/188 (32%), Gaps = 10/188 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M     +   Y E   P +++      +G    +  ++F  +  ++   +
Sbjct: 170 ARLHRALSQFMIDLHTEQHGYLETYVPYLVNHATLYGTGQLPKFGEDLFHTRPLEEE-SE 228

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
              +AL P        +    +     LP++L      +R+E         GL+R+  F 
Sbjct: 229 SSHYALIPTAEVPLTNLVRDEIVEEENLPLKLTAHTPCFRSEAGSYGRDTRGLIRMHQFD 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E   +   ++      + +        V L T              +W  
Sbjct: 289 KVEMVQIVAPETSMDALEELVGHAEKVLQLLNLPYRKVLLCTGDMGFGATKTYDLEVWLP 348

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 349 AQNTYREI 356


>gi|291288281|ref|YP_003505097.1| seryl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
 gi|290885441|gb|ADD69141.1| seryl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
          Length = 422

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/243 (13%), Positives = 77/243 (31%), Gaps = 21/243 (8%)

Query: 222 GTAWNTQQELTQYLY-FLEESEKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIF 276
           G   N       +        E + H  +A  + L           S    +   G K+ 
Sbjct: 114 GADENDNVLFRSWGEPKKYSFEAKPHWDIAEGLGLVDFERGVKIAQSRFSAYMGLGAKLE 173

Query: 277 QTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFA 335
           + LI++M     +  Y+E+  P +++    + +G    +  + F          +     
Sbjct: 174 RALINFMLDAHAERGYKEVLAPYLVNAEAMKGTGQLPKFEEDAFKC--------EKDGLY 225

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAH 392
           L P        +++  +     LPV+   + + +R E       + GL+R   F + +  
Sbjct: 226 LIPTAEVSVTNLYSQEILDEEMLPVKHCSYSACFRREAGSHGKDVRGLIRQHQFNKVELV 285

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIM 448
                E    E +++      I +       ++ L +              +W  ++   
Sbjct: 286 KVVKPEDSDTELMELLESAEMILQKLNIPYRIMTLCSGDLGFSSAKTFDIEVWLPSQGGY 345

Query: 449 KGV 451
           + +
Sbjct: 346 REI 348


>gi|288560504|ref|YP_003423990.1| histidyl-tRNA synthetase HisS [Methanobrevibacter ruminantium M1]
 gi|288543214|gb|ADC47098.1| histidyl-tRNA synthetase HisS [Methanobrevibacter ruminantium M1]
          Length = 433

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/237 (15%), Positives = 86/237 (36%), Gaps = 17/237 (7%)

Query: 406 KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINT 465
           +++ ++  +    G   I+  +         +    ++ + ++K  L++ +     ++N 
Sbjct: 210 ELNEVLFKLMDMVGDSSIIKDIEELVAPYEETQEALEEFKELVKT-LESFQV-FNYKLNL 267

Query: 466 GVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHR 525
           GV  G   + G  FE  ++    +   CG     +NL   F    V S            
Sbjct: 268 GVARGLDYYTGIVFEVYVEGLGAQKQVCGG--GTYNLVKLFGGEDVVSTGFALG------ 319

Query: 526 AVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD 585
                 +R +   IE   G + L    +   V  I+ S    A  IA  L+  ++  E D
Sbjct: 320 -----FDRLMNA-IEELNGKVELEPI-VNTYVAAISDSTRHNAFSIAQDLRKANIPTEVD 372

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
              +     +   +   +   ++ G+++  E  + I+   +   + V++ + +  + 
Sbjct: 373 LSRKKFKKILAYANKIDVKYTVLVGERDLEEGKVTIKDMLTGEQELVAIDEVVDYIK 429


>gi|254412359|ref|ZP_05026133.1| histidyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420]
 gi|196180669|gb|EDX75659.1| histidyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420]
          Length = 462

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 67/458 (14%), Positives = 149/458 (32%), Gaps = 82/458 (17%)

Query: 261 DGSGVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDS---YRA 316
             SG   +     ++   LI  +R+  +   +  I TP V    + Q  G+      Y  
Sbjct: 11  CPSGFPEFLPGEKRLEMYLIDTIRQVFERYGFTPIETPAVERLEVLQAKGNQGDNIIYGL 70

Query: 317 N--MFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL--PVRLAEFGSVYRNE 372
              +   + A+           + +     V +  +  +   EL  P    +   V+R E
Sbjct: 71  QPILPPNRQAEKEQAGESGSEERALKFDQTVPLAAYIARHLNELQFPFARYQIDVVFRGE 130

Query: 373 PSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR-- 430
            + +     R R F Q D  V    +       +I  +I  I+        +++++ R  
Sbjct: 131 RAKA----GRYRQFRQCDIDVVGRNKLSLLYDAQIPAIIAEIFTAINIGDFLIRINNRKV 186

Query: 431 ---PEKRVGSDA--------LWDDAENIMK------------------------------ 449
                + +G D         + D AE I +                              
Sbjct: 187 LSGFFESIGLDESKIMPSIRIVDAAEKIGETKVKKALLAEGLSDEQVEQILTFTKIQGSV 246

Query: 450 -GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNA 508
             VL  +    +D+ +  VL    A      E ++              +D ++    + 
Sbjct: 247 DEVLAQLNAMLEDKPDAQVLKTGIAE----LETVITGVRNLGVSDRVFCIDLSIARGLDY 302

Query: 509 FY--VNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWL---------------- 550
           +   V   +   H  +      G  E  +G+ + +    + + +                
Sbjct: 303 YTGTVYETTLVGHEALGSICSGGRYEELVGMFVGDKMPGVGISIGLTRLMSRLIQAGILE 362

Query: 551 ----SPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPII 606
               +P Q +V  + S  +    E++  L+   +S  T F   ++  ++++   + IP+ 
Sbjct: 363 SFSSTPAQVMVVNMQSDLMPLYLEVSQKLRQAGISTITSFDERSVGKQLQQADKRGIPLC 422

Query: 607 IICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +I G +EA+ +  G++   +     V++      ++K+
Sbjct: 423 VIIGSEEAAAQKCGLKNMRTGEQIAVNIEQLANEVSKQ 460


>gi|216264058|ref|ZP_03436052.1| alanyl-tRNA synthetase [Borrelia afzelii ACA-1]
 gi|215980102|gb|EEC20924.1| alanyl-tRNA synthetase [Borrelia afzelii ACA-1]
          Length = 594

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 54/130 (41%), Gaps = 10/130 (7%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           H+  H++ +A+Q +  +     G  I  +   +DF   +  + DE+ ++E  +   I   
Sbjct: 456 HTATHLLHKALQLVLGDHVKQKGSNITAERLRFDFVHSKKMTDDEIKKVEDIVNLQIKNS 515

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTG 192
               K  +   +ARE         K + L        V++Y    +  ++C GPHV +T 
Sbjct: 516 LSVKKSIMELSEAREKGAMALFGEKYDNL--------VSVYEIDGFSLEVCGGPHVENTN 567

Query: 193 QVKKFFKLMK 202
           ++  F    +
Sbjct: 568 ELGTFKIQKE 577


>gi|170733171|ref|YP_001765118.1| histidyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
 gi|206560246|ref|YP_002231010.1| histidyl-tRNA synthetase [Burkholderia cenocepacia J2315]
 gi|229558659|sp|B1JT91|SYH_BURCC RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|229558660|sp|B4EAW8|SYH_BURCJ RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|169816413|gb|ACA90996.1| histidyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
 gi|198036287|emb|CAR52183.1| histidyl-tRNA synthetase [Burkholderia cenocepacia J2315]
          Length = 446

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 62/405 (15%), Positives = 126/405 (31%), Gaps = 73/405 (18%)

Query: 289 DDYEEINTPQVLDQHLWQ--QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA 346
             Y+ I TP V    L+        D     M++   A +         ++P N    V 
Sbjct: 42  YGYQNIRTPIVEHTQLFTRGIGEVTDIVEKEMYSFTDALN----GENLTMRPEN-TAAVV 96

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD--DAHVFCTKEQMFNEC 404
             +       + P RL   G ++R+E         R R F Q   +A  F   +      
Sbjct: 97  RASIEHNMLYDGPKRLWYIGPMFRHERPQR----GRYRQFHQVGVEALGFAGPDADA--- 149

Query: 405 LKIHNLIISIYKDFG--------------FEKIMVKLSTRPEKRVGSDALWDDAENIM-- 448
            +I  +   ++ D G               E+   ++         +D L +DA+  +  
Sbjct: 150 -EIIMMCQRLWDDLGLTGIKLEINSLGLAEERAAHRVELIKYLEQFADVLDEDAKRRLYT 208

Query: 449 ---------KGVLDTIKNSSQDRINTGVLLGEGAFYGP-------KFEYILKDAIGRDWQ 492
                       L  I  ++   I+         F G           + +   + R   
Sbjct: 209 NPLRVLDTKNPALQDIAQNAPKLIDFLGDESRAHFEGLQRLLLANNIPFKINPRLVRGLD 268

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIH-------RAVFGS-IERFIGIMIENFKG 544
              + V   +  +  A    +   +  P++            +   IER + ++ E    
Sbjct: 269 YYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQLGGKPTAACGWAMGIERILELLKEED-- 326

Query: 545 NLPLWLSPIQ----AIVTTITSSAVEYAQEIANLLKSHHLSI----ETDFRNETINYKIR 596
                L+P Q      V     +A E A   A  L+   L +      D    +   +++
Sbjct: 327 -----LAPEQEGVDVYVVHQGETAREQAFIAAERLRDTGLDVIFHCSADGAPASFKSQMK 381

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRR-FGSTTTQKVSLLDAIPI 640
                     +I G++E +  ++G++   G+    + ++   +P+
Sbjct: 382 RADASGAAFAVIFGEEEVANGTVGVKALRGAGAEGEKNVQQTVPV 426


>gi|310778224|ref|YP_003966557.1| histidyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
 gi|309747547|gb|ADO82209.1| histidyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
          Length = 413

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/115 (20%), Positives = 52/115 (45%), Gaps = 7/115 (6%)

Query: 529 GSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRN 588
             IER + +++E++  N P      +  +  +      YA  IA  L+   +    +F +
Sbjct: 306 AGIERLM-MLLEDYPKNNP------EVFIAWLGKDEATYAFGIAKALRDAGIKTCIEFSS 358

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            ++   +++     +   II GD+E + + + ++ F   T + +S+ D I  L K
Sbjct: 359 RSLKASMKKADKLGVGHAIIIGDEEMANKKMVLKNFQERTQETLSIEDVIKRLKK 413


>gi|293603800|ref|ZP_06686216.1| serine--tRNA ligase [Achromobacter piechaudii ATCC 43553]
 gi|292817798|gb|EFF76863.1| serine--tRNA ligase [Achromobacter piechaudii ATCC 43553]
          Length = 448

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 40/233 (17%), Positives = 81/233 (34%), Gaps = 24/233 (10%)

Query: 242 EKRDHRKLAREMDL-FHIAEDGSGVIF-WHRKG--WKIFQTLISYMRRKIK--DDYEEIN 295
           E RDH  +   + L F +A   SG  F +  +G   ++ + L  +M         Y E  
Sbjct: 143 EARDHVAIGEPLGLDFDMAAKLSGARFSFM-RGPIARLHRALSQFMLDLQTGTHGYTECY 201

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKP----------MNCPGHV 345
           TP +++      +G    ++ +MFAV             A  P           +     
Sbjct: 202 TPYIVNASTLYGTGQLPKFKDDMFAVSKGGGDDDPKVDAAGNPYVREDQYLISTSEITLT 261

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFN 402
           +V    +++  +LP++L      +R+E         G++R   F + +       +Q + 
Sbjct: 262 SVARDTIQAAADLPLKLTAHTPCFRSEAGSGGRDTRGMIRQHQFDKVEMVQITQPDQSYE 321

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
               +      + +  G    ++ L T              +W  A+N  + +
Sbjct: 322 ALEDMVGHAERVLQLLGLPYRVMLLCTGDMGFGSAKTYDLEVWLPAQNTWREI 374


>gi|291616897|ref|YP_003519639.1| SerS [Pantoea ananatis LMG 20103]
 gi|291151927|gb|ADD76511.1| SerS [Pantoea ananatis LMG 20103]
          Length = 430

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 62/188 (32%), Gaps = 10/188 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M     +   Y E   P +++      +G    +  ++F  +  ++   +
Sbjct: 170 ARLHRALSQFMIDLHTEQHGYLETYVPYLVNHATLYGTGQLPKFGEDLFHTRPLEEE-SE 228

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
              +AL P        +    +     LP++L      +R+E         GL+R+  F 
Sbjct: 229 SSHYALIPTAEVPLTNLVRDEIVEEENLPLKLTAHTPCFRSEAGSYGRDTRGLIRMHQFD 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E   +   ++      + +        V L T              +W  
Sbjct: 289 KVEMVQIVAPETSMDALEELVGHAEKVLQLLNLPYRKVLLCTGDMGFGATKTYDLEVWLP 348

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 349 AQNTYREI 356


>gi|39995148|ref|NP_951099.1| seryl-tRNA synthetase [Geobacter sulfurreducens PCA]
 gi|67461826|sp|Q74H55|SYS_GEOSL RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|39981910|gb|AAR33372.1| seryl-tRNA synthetase [Geobacter sulfurreducens PCA]
 gi|298504178|gb|ADI82901.1| seryl-tRNA synthetase [Geobacter sulfurreducens KN400]
          Length = 422

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/189 (14%), Positives = 69/189 (36%), Gaps = 17/189 (8%)

Query: 272 GWKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
           G ++ + L+++M     +  +Y E+  P V+++     +G    +  ++F ++  D    
Sbjct: 168 GARLERALVNFMLDLHTERHNYLEMLPPFVVNRESMTGTGQLPKFEDDLFHLEGVD---- 223

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGF 386
               + L P        +    +    +LP+    +   +R E       + GL+R   F
Sbjct: 224 ----YFLIPTAEVPVTNIHRAEILKAADLPLSYTAYTPCFRKEAGSYGKDVRGLIRQHQF 279

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWD 442
            + +   F      ++E  K+ +    + +  G    +V+L T              +W 
Sbjct: 280 NKVELVKFVHPATSYDELEKLLSNAEEVLRQLGLAYRVVELCTGDMGFSAAKTYDIEVWL 339

Query: 443 DAENIMKGV 451
             +   + +
Sbjct: 340 PGQETYREI 348


>gi|217970182|ref|YP_002355416.1| seryl-tRNA synthetase [Thauera sp. MZ1T]
 gi|217507509|gb|ACK54520.1| seryl-tRNA synthetase [Thauera sp. MZ1T]
          Length = 430

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/228 (16%), Positives = 76/228 (33%), Gaps = 16/228 (7%)

Query: 237 FLEESEKRDHRKLAREMDL-FHIAEDGSGVIF-WHRKG--WKIFQTLISYMRRKIKD--D 290
              + E RDH  L   + L F      SG  F +  +G   ++ + L  +M         
Sbjct: 130 RAYDFEVRDHVDLGAPLGLDFETGAKLSGSRFAFL-RGPVARLHRALAQFMLDTHTREHG 188

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH 350
           Y E  TP +++      +G    ++ ++F V    D   +     L P            
Sbjct: 189 YTECYTPYIVNGSALYGTGQLPKFKEDLFWVLRGGDE--EGLEQYLIPTAEITLTNSVRE 246

Query: 351 GLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
            + +   LP+RL      +R+E       + G++R   F + +        +      ++
Sbjct: 247 EVLALESLPIRLTAHSPCFRSEAGSGGRDVRGMIRQHQFDKVEMVQIVEPAKSKEALEQM 306

Query: 408 HNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
                +I +       ++ L T              +W  A+N  + +
Sbjct: 307 VGHAEAILQKLELPYRVITLCTGDMGFSAAKTYDLEVWLPAQNTYREI 354


>gi|121635325|ref|YP_975570.1| seryl-tRNA synthetase [Neisseria meningitidis FAM18]
 gi|166222753|sp|A1KV93|SYS_NEIMF RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|120867031|emb|CAM10794.1| seryl-tRNA synthetase [Neisseria meningitidis FAM18]
 gi|325132820|gb|EGC55500.1| seryl-tRNA synthetase [Neisseria meningitidis M6190]
 gi|325138723|gb|EGC61275.1| seryl-tRNA synthetase [Neisseria meningitidis ES14902]
 gi|325198782|gb|ADY94238.1| seryl-tRNA synthetase [Neisseria meningitidis G2136]
          Length = 431

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 64/188 (34%), Gaps = 11/188 (5%)

Query: 273 WKIFQTLISYMRRK--IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M     ++  Y E  TP ++D    Q +G    +  ++F V    D  K 
Sbjct: 171 ARLHRALAQFMLDTHTLQHGYTEHYTPYIVDDTTLQGTGQLPKFAEDLFHVTRGGDETKT 230

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
            +     P             +    +LP++L      +R+E         GL+R   F 
Sbjct: 231 TQYLI--PTAEVTLTNTVADSIIPSEQLPLKLTAHSPCFRSEAGSYGKDTRGLIRQHQFD 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E+ +    ++     +I K       ++ L T              +W  
Sbjct: 289 KVEMVQIVHPEKSYEALEEMVGHAENILKALELPYRVITLCTGDMGFGATKTYDLEVWVP 348

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 349 AQNTYREI 356


>gi|315142802|gb|ADT80976.1| glutamyl- and prolyl-tRNA synthetase [Myrmekiaphila torreya]
 gi|315142846|gb|ADT80998.1| glutamyl- and prolyl-tRNA synthetase [Myrmekiaphila torreya]
 gi|315142848|gb|ADT80999.1| glutamyl- and prolyl-tRNA synthetase [Myrmekiaphila torreya]
 gi|315142852|gb|ADT81001.1| glutamyl- and prolyl-tRNA synthetase [Myrmekiaphila torreya]
          Length = 148

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 53/143 (37%), Gaps = 19/143 (13%)

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           GA +    E  +  + GR  Q  T   +  N    F   + +  + +     +++  +G 
Sbjct: 9   GADFTTTVEAYVP-SNGRAIQGATSHHLGQNFSKMFEIVFEHPDTVEKQ--YVYQNSWGL 65

Query: 531 IERFIGIMIENFKGN----LPLWLSPIQAIVTTITSSA----------VEYAQEIANLLK 576
             R IG+ +     N    LP  ++P Q ++     +A           E  + +   L+
Sbjct: 66  SSRSIGVAVMVHGDNSGLVLPPRVAPHQVVIVPCGVTANLPESEKKLLAEKCEALEKELR 125

Query: 577 SHHLSIETDFR-NETINYKIREH 598
              + ++ D+R N +  +K    
Sbjct: 126 EASIRVKGDYRENYSPGWKFNHW 148


>gi|111115044|ref|YP_709662.1| alanyl-tRNA synthetase [Borrelia afzelii PKo]
 gi|123145760|sp|Q0SNU2|SYA_BORAP RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|110890318|gb|ABH01486.1| alanyl-tRNA synthetase [Borrelia afzelii PKo]
          Length = 594

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 54/130 (41%), Gaps = 10/130 (7%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           H+  H++ +A+Q +  +     G  I  +   +DF   +  + DE+ ++E  +   I   
Sbjct: 456 HTATHLLHKALQLVLGDHVKQKGSNITAERLRFDFVHSKKMTDDEIKKVEDIVNLQIKNS 515

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTG 192
               K  +   +ARE         K + L        V++Y    +  ++C GPHV +T 
Sbjct: 516 LSVKKSIMELSEAREKGAMALFGEKYDNL--------VSVYEIDGFSLEVCGGPHVENTN 567

Query: 193 QVKKFFKLMK 202
           ++  F    +
Sbjct: 568 ELGTFKIQKE 577


>gi|295426088|ref|ZP_06818758.1| histidine--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
 gi|295064257|gb|EFG55195.1| histidine--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
          Length = 428

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 69/429 (16%), Positives = 135/429 (31%), Gaps = 69/429 (16%)

Query: 265 VIFWHRKGW------------KIFQTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWD 312
           +     KG             K+ QT  ++ +R    +Y EI TP   +  ++ +S    
Sbjct: 1   MRVQRPKGTVDILPGTSDSWEKVEQTASNFFKR---ANYREIRTPMFENYEVFARSSGES 57

Query: 313 SYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF--NHGLKSYRELPVRLAEFGSVYR 370
              +++   +  D   K  R  AL+P    G V  +  N         P  +      +R
Sbjct: 58  ---SDIVEKEMYDFDDKGGRHIALRPEGTAGVVRAYVENKLYGPEIVKPFNVFYIDPTFR 114

Query: 371 NEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTR 430
            E   +     R R F Q     F +   + +   +   +   +  + G +   + +++ 
Sbjct: 115 YERPQA----GRQREFHQIGVESFGSSSPLADV--ETIMMGHDLLAELGVKNYELHINSL 168

Query: 431 PEKRVGSDALWDDAENIMKGVLDTIKNSSQDRI--------NTGVLLGEGAF-YGPKFEY 481
               V   A  D   +    + D +   SQ R+        ++     +      PK   
Sbjct: 169 GNAAV-RKAYHDALVDYFTPLKDQLSEDSQRRLSMNPLRILDSKAEEDQKFLPDAPKIRE 227

Query: 482 ILKDAIGRDW-----QCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
            L D   +++         + +D+ +                  ++  + ++ S    +G
Sbjct: 228 FLDDDAKKNFETITNTLTQLGIDYVIDDDLVRGLDYYTGVIFEFMVADKKLWESATTILG 287

Query: 537 -----IMIENFKG-------------NLPLWLSPIQAI----------VTTITSSAVEYA 568
                 ++E F G              L L L                +T I        
Sbjct: 288 GGRYDHLVEEFGGPATPAVGFGIGEERLMLVLKEQNPALFEDNGIDFFITNIGEGTEMKT 347

Query: 569 QEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTT 628
            EIA LL+      + D   + +  + R+ +      +I  G KE    ++ I+R     
Sbjct: 348 VEIARLLRKQGFKTQYDVDQKKLKQQFRKANRVHAKYVITLGAKELENGTLNIKRLADGK 407

Query: 629 TQKVSLLDA 637
           T  +SL D 
Sbjct: 408 TIDLSLDDL 416


>gi|313676879|ref|YP_004054875.1| seryl-tRNA synthetase [Marivirga tractuosa DSM 4126]
 gi|312943577|gb|ADR22767.1| seryl-tRNA synthetase [Marivirga tractuosa DSM 4126]
          Length = 424

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/221 (14%), Positives = 75/221 (33%), Gaps = 20/221 (9%)

Query: 243 KRDHRKLAREMDLFHIA----EDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTP 297
           K+ H  L ++ D+          G+G   +  KG ++ + L+++ +    K  ++EI  P
Sbjct: 141 KKPHWDLIKDYDIIDFDLGIKITGAGFPVYKGKGARMQRALLNFFLDEAEKQGFKEIQPP 200

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++++                   K       +     L P        +    + +  +
Sbjct: 201 VLVNE--------ASGIGTGQLPDKEGQMYHIEDTDLYLIPTAEVPITNLLRDEIINEED 252

Query: 358 LPVRLAEFGSVYRNEPSG---SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           LP++L  +   +R E       + GL R+  F + +       ++ +    ++ + I S+
Sbjct: 253 LPIKLTAYTPCFRKEAGSWGAHVRGLNRLHQFDKVEIVQVLHPDKSYQALEEMSSYIQSL 312

Query: 415 YKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
                    +++L                +W  A+     V
Sbjct: 313 LTKLELPYRVLRLCGGDLGFTSALTYDMEVWSAAQEKWLEV 353


>gi|226306422|ref|YP_002766382.1| histidyl-tRNA synthetase [Rhodococcus erythropolis PR4]
 gi|259511955|sp|C0ZZ58|SYH_RHOE4 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|226185539|dbj|BAH33643.1| histidyl-tRNA synthetase [Rhodococcus erythropolis PR4]
          Length = 423

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 68/192 (35%), Gaps = 20/192 (10%)

Query: 452 LDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYV 511
           LD +       +N  ++ G   +    FE+ + D +G        Q       R++    
Sbjct: 244 LDALGVPYV--VNPRMVRGLDYYTKTTFEF-VHDGLG-------AQSGIGGGGRYDGLME 293

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
               +    +     V    +R +  +    K   P   + +      + + A     +I
Sbjct: 294 QLGGQPLSGIGFGIGV----DRTVLALEAEGKSVAPP--ARVDVFCVPMGAEAKAALVKI 347

Query: 572 ANLLKSHHLSIETDFRNETINYK--IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTT 629
           A+ L+++ + ++  + N     K  ++        + ++ G++E  E  + +++  +   
Sbjct: 348 AHQLRANGIRVDLAYGNR--GVKGSMKAADRSGAAVALVLGERELEEGVVVVKQLATGEQ 405

Query: 630 QKVSLLDAIPIL 641
           + V L   +  L
Sbjct: 406 ETVPLDQVVDKL 417


>gi|222151505|ref|YP_002560661.1| alanyl-tRNA synthetase homolog [Macrococcus caseolyticus JCSC5402]
 gi|222120630|dbj|BAH17965.1| alanyl-tRNA synthetase homolog [Macrococcus caseolyticus JCSC5402]
          Length = 874

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 54/134 (40%), Gaps = 8/134 (5%)

Query: 72  VIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDELAQIEKKMQEII 130
           +  HS  H+M +A++ +        G  +  +   +DF    P + +E+A++E+ + E I
Sbjct: 561 IKNHSATHLMHQALKDVLGTHVNQAGSLVTPERLRFDFSHFGPVTKEEIAKVEQIVNEKI 620

Query: 131 ARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRS 190
            ++       +   +A+          K   +  +               +LC G HVR+
Sbjct: 621 WQNIHVEINEMPISEAKAKGAMALFGEKYGDIVRVVE-------MSDYSIELCGGVHVRN 673

Query: 191 TGQVKKFFKLMKVA 204
           TG++  F  + +  
Sbjct: 674 TGEIGLFKIVSESG 687


>gi|165940924|gb|ABY75307.1| seryl-tRNA synthetase [Ovis aries]
          Length = 245

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/159 (16%), Positives = 54/159 (33%), Gaps = 9/159 (5%)

Query: 275 IFQTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           + Q LI + +R      Y  I TP  + + + Q+      +   ++ V        D  +
Sbjct: 47  LEQALIQFALRTLESRGYTPIYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGSERSDDNS 106

Query: 334 FALKP---MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFT 387
           F  K     +     A+         +LP++ A   + +R E         G+ RV  F 
Sbjct: 107 FEEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGRDTRGIFRVHQFE 166

Query: 388 QDDAHVFCTKEQ--MFNECLKIHNLIISIYKDFGFEKIM 424
           + +  V+ +      +    ++       Y+  G    +
Sbjct: 167 KIEQFVYSSPHDNKSWEMFEEMIATAEEFYQSLGIPYHI 205


>gi|321441299|gb|ADW85064.1| glu- + pro-tRNA synthetase [Euclemensia bassettella]
          Length = 134

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 53/133 (39%), Gaps = 18/133 (13%)

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           G +Y    E  +  A GR  Q  T   +  N    F+  Y +  +++   + +++  +G 
Sbjct: 1   GGYYTTTVEGYIP-ASGRAIQGATSHHLGQNFSRMFDVVYDDPDTQEK--MFVYQNSWGL 57

Query: 531 IERFIGIMI----ENFKGNLPLWLSPIQAIVTTIT----------SSAVEYAQEIANLLK 576
             R IG+M+    ++    LP  ++ IQ IV                  +  +++   L 
Sbjct: 58  TTRTIGVMVLVHGDDRGLVLPPRVAEIQVIVVPCGVTASSTQEERKKLRDECEKLVKELV 117

Query: 577 SHHLSIETDFRNE 589
           +  +  E D+R+ 
Sbjct: 118 TAGIRAEGDYRDN 130


>gi|300716073|ref|YP_003740876.1| Seryl-tRNA synthetase [Erwinia billingiae Eb661]
 gi|299061909|emb|CAX59025.1| Seryl-tRNA synthetase [Erwinia billingiae Eb661]
          Length = 430

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/188 (12%), Positives = 60/188 (31%), Gaps = 10/188 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
             + + L  +M     +   Y E   P +++      +G    +  ++F  +  ++    
Sbjct: 170 ALMHRALSQFMLDLHTEQHGYLETYVPYLVNHASLHGTGQLPKFGEDLFHTRPLEEEAS- 228

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
              +AL P +      +    +     LP++       +R+E         GL+R+  F 
Sbjct: 229 SSDYALIPTSEVPLTNMVRDEILEEESLPLKFTAHTPCFRSEAGAYGRDTRGLIRMHQFD 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E   +   ++      + +        V L T              +W  
Sbjct: 289 KVEMVHITRPEDSMDALEELVGHAEKVLQLLELPYRKVLLCTGDMGFGSCKTYDLEVWLP 348

Query: 444 AENIMKGV 451
           A++  + +
Sbjct: 349 AQDTYREI 356


>gi|28897882|ref|NP_797487.1| seryl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|260364482|ref|ZP_05777107.1| serine--tRNA ligase [Vibrio parahaemolyticus K5030]
 gi|260877041|ref|ZP_05889396.1| serine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|260902447|ref|ZP_05910842.1| serine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
 gi|31340446|sp|Q87QP1|SYS_VIBPA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|28806095|dbj|BAC59371.1| seryl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|308093830|gb|EFO43525.1| serine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|308110643|gb|EFO48183.1| serine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
 gi|308114618|gb|EFO52158.1| serine--tRNA ligase [Vibrio parahaemolyticus K5030]
          Length = 435

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/190 (12%), Positives = 62/190 (32%), Gaps = 11/190 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + +  +M     +   Y E+  P +++      +G    +  ++F  +   + + D
Sbjct: 172 ARLHRAIAQFMLDLHTEEHGYTEMYVPYLVNSDSLFGTGQLPKFGKDLFHTEPLAEKVND 231

Query: 331 L--RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRG 385
              R  +L P        +    +    +LP+++      +R+E         GL+R+  
Sbjct: 232 EEPRKLSLIPTAEVPVTNLVRDTITDEADLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQ 291

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALW 441
           F + +       E       ++      + +        V L T              +W
Sbjct: 292 FDKVELVQITKPEDSMTALEELTGHAEKVLQLLELPYRKVVLCTGDMGFGARKTYDLEVW 351

Query: 442 DDAENIMKGV 451
             A+   + +
Sbjct: 352 VPAQETYREI 361


>gi|124514184|gb|EAY55699.1| Alanyl-tRNA synthetase [Leptospirillum rubarum]
          Length = 891

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/186 (20%), Positives = 72/186 (38%), Gaps = 33/186 (17%)

Query: 12  GSIKNFPVHATGSDVAESISRSLAKKAVAVAIN-GKVCDLSDPVREGSIEIITPEDPRSL 70
           G+ K +P               L+ + V+  ++ G+  D          + +  E  +  
Sbjct: 523 GAKKPYPGWIV-----------LSGEVVSGKVSVGETID----------QHVDEEARQGS 561

Query: 71  AVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
               H+  H++  A++++  E     G  +  +   +DF   QP S + L  +E  +   
Sbjct: 562 E-RHHTATHLLHAALRTVLGEQVRQAGSLVAPERLRFDFTCPQPVSPENLLAVEALVNGW 620

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ-GEWFDLCRGPHV 188
           I R+SP     +   KA ++        K          + V + +  G   +LC G HV
Sbjct: 621 IFRNSPVDASEMEKSKALDMGALAFFDEKY--------GDRVRVVQVPGTSVELCGGTHV 672

Query: 189 RSTGQV 194
           RSTGQ+
Sbjct: 673 RSTGQI 678


>gi|300726084|ref|ZP_07059542.1| histidine--tRNA ligase [Prevotella bryantii B14]
 gi|299776691|gb|EFI73243.1| histidine--tRNA ligase [Prevotella bryantii B14]
          Length = 109

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 13/94 (13%), Positives = 31/94 (32%)

Query: 550 LSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIIC 609
           ++  Q I          Y+  +    +   +  E       +  ++   + K I   +  
Sbjct: 8   INATQVIFINFGDKETAYSLPVLKACREAGIRAEIFPDAAKMKKQMNYANAKHIAYAVFT 67

Query: 610 GDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           GD E     + ++       + VS  + I I++ 
Sbjct: 68  GDSEIEAGKVTVKDMEMGGQKLVSTEELIAIVSN 101


>gi|229826225|ref|ZP_04452294.1| hypothetical protein GCWU000182_01597 [Abiotrophia defectiva ATCC
           49176]
 gi|229789095|gb|EEP25209.1| hypothetical protein GCWU000182_01597 [Abiotrophia defectiva ATCC
           49176]
          Length = 416

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 75/206 (36%), Gaps = 20/206 (9%)

Query: 438 DALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQ 497
           D    +  + ++ +L  +    +  I+TG++   G  Y  K  +   D  G     G   
Sbjct: 228 DEECKNHFDTLQKMLTELNIPFE--IDTGIV--RGLDYYTKTVFEFVDKDGFTLCGGG-- 281

Query: 498 VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS-IERFIGIMIENFKGNLPLWLSPIQAI 556
                  R++        ++  P +     FG  IER +  + E    +L     P    
Sbjct: 282 -------RYDGLINEIDGKQNIPAV----GFGMGIERILYFL-EKEGVSLGEMPHPR-LY 328

Query: 557 VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASE 616
           V  +       A EI   L++  + +ETD+ + ++  +++  +   +   +I G  EA  
Sbjct: 329 VGIMGDEVKAKAFEIVTKLRNKGVIVETDYLDRSVKAQMKYANKLGVDYTVIIGQNEAES 388

Query: 617 RSIGIRRFGSTTTQKVSLLDAIPILT 642
             + ++   +    +V   +    L 
Sbjct: 389 GLVKLKNMETGDETEVKFEELEVKLA 414


>gi|223044141|ref|ZP_03614180.1| alanyl-tRNA synthetase [Staphylococcus capitis SK14]
 gi|222442535|gb|EEE48641.1| alanyl-tRNA synthetase [Staphylococcus capitis SK14]
          Length = 876

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/145 (21%), Positives = 63/145 (43%), Gaps = 11/145 (7%)

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELA 120
           +  ED R++    HS  H++  A++ +  +     G ++E D   +DF    P + +EL 
Sbjct: 553 VNKEDRRAIQ-KNHSATHLLHAALKEVLGDHVNQAGSLVEADRLRFDFSHFGPMTQEELD 611

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW- 179
           Q+E+++ E I R      Q +  ++A+ +        K          + V +     + 
Sbjct: 612 QVERRVNEEIWRGIDVRIQEMGIDEAKSMGAMALFGEKY--------GDIVRVVNMAPFS 663

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVA 204
            +LC G HV +T ++  F  + +  
Sbjct: 664 IELCGGIHVSNTAEIGLFKIVSESG 688


>gi|145224391|ref|YP_001135069.1| histidyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
 gi|145216877|gb|ABP46281.1| histidyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
          Length = 420

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/205 (12%), Positives = 70/205 (34%), Gaps = 17/205 (8%)

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
           SDA  +  + ++   LD +       IN  ++ G   +    FE+ + D +G        
Sbjct: 228 SDAAKEHFDTVL-AHLDALSVPYV--INPRMVRGLDYYTKTTFEF-VHDGLG-------A 276

Query: 497 QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI 556
           Q       R++             +       G     + +  E   G      + +   
Sbjct: 277 QSGIGGGGRYDGLMAQLGGRDLSGIGF---GLGVDRTLLALRAE---GKAAGETARVDVY 330

Query: 557 VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASE 616
              + + A      +A  L++  + ++  + + ++   ++        I ++ GD++   
Sbjct: 331 AVPLGADAKVRLAVLAAQLRAAGVRVDVAYGDRSLKGAMKGADRSGASIALVAGDRDLEA 390

Query: 617 RSIGIRRFGSTTTQKVSLLDAIPIL 641
            ++G++   +     V+  D +  +
Sbjct: 391 GTVGVKSMATGEQVDVASDDVVAEV 415


>gi|114562241|ref|YP_749754.1| alanyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
 gi|122300463|sp|Q085Z9|SYA_SHEFN RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|114333534|gb|ABI70916.1| alanyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
          Length = 874

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 51/139 (36%), Gaps = 10/139 (7%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSDELAQIEKKM 126
           R    + HS  H++  A++ +        G ++      +DF   +     EL  +E  +
Sbjct: 555 RHRTQLNHSVTHLLHAALRQVLGSHVSQKGSLVNPERLRFDFAHFEAVKPSELKAVEDLV 614

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRG 185
              I R+       ++ ++A+E         K          + V +   G++  +LC G
Sbjct: 615 NTQIRRNHELCTAEMAIDEAKEKGAMALFGEKY--------DDQVRVVTMGDFSIELCGG 666

Query: 186 PHVRSTGQVKKFFKLMKVA 204
            HV  TG +  F    +  
Sbjct: 667 THVGRTGDIGLFKITSENG 685


>gi|321441335|gb|ADW85082.1| glu- + pro-tRNA synthetase [Spodoptera frugiperda]
          Length = 134

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 51/133 (38%), Gaps = 18/133 (13%)

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           G  Y    E  +  A GR  Q  T   +  N    F   Y +  +++     +++  +G 
Sbjct: 1   GGDYTTTVEAYIP-ASGRAIQGATSHHLGQNFSKMFEVVYDDPDTQEKK--YVYQNSWGI 57

Query: 531 IERFIGIMIENFKGNLPLWLSP----IQAIVTTIT----------SSAVEYAQEIANLLK 576
             R IG+M+     +  L L P    +QAIV              +  ++  +++   L 
Sbjct: 58  TTRTIGVMVLVHGDDKGLVLPPRVADVQAIVVPCGITASSTTEERNKLMDSCKDLVKDLL 117

Query: 577 SHHLSIETDFRNE 589
           +  +  E D+R+ 
Sbjct: 118 AAGIRAEGDYRDN 130


>gi|300812622|ref|ZP_07093035.1| histidine--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
 gi|300496403|gb|EFK31512.1| histidine--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
          Length = 428

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 70/430 (16%), Positives = 135/430 (31%), Gaps = 86/430 (20%)

Query: 276 FQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           ++ +    R   K  +Y EI TP   +  L+ +S       +++   +  D   K  R  
Sbjct: 20  WEKVEQTARDLFKRANYHEIRTPSFENYELFSRSSGET---SDVVEKEMYDFEDKGGRHI 76

Query: 335 ALKPMNCPGHVAVFNHGLKSYREL--PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
           AL+P    G V  +        +   P  +    ++YR E   +     R R F Q    
Sbjct: 77  ALRPEGTAGVVRAYVENKIYGPDYVKPFNVYYIAAMYRYERPQA----GRQREFHQIGVE 132

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVL 452
            F +    +   ++   L   +  + G +   + ++T  +  V   A  D   +    V 
Sbjct: 133 SFGS--NGYLSDVETILLGHDLLAELGVKNYELHINTLGDSEV-RQAYHDALVDYFTPVK 189

Query: 453 DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQ-----CGTIQ--VDFNLPSR 505
           D +   SQ R+              K    + D+   + Q        I+  +D      
Sbjct: 190 DQLSEDSQRRLG-------------KNPLRILDSKAEEDQQFLPEAPKIRDYLDEESKEN 236

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI--------- 556
           FN    +   +     +I   +   ++ + G++ E    +  LW SP   +         
Sbjct: 237 FNKILASLD-KLGVKYVIDDDLVRGLDYYTGVIFEFMVDDPTLWASPSTVLGGGRYNHLV 295

Query: 557 ----------------------------------------VTTITSSAVEYAQEIANLLK 576
                                                   +T I       A E+A  L+
Sbjct: 296 EEFSGPETPAVGFGIGEERLMLVLSKQNPEMFEDQGIDFFITNIGEGTDIKAVEVARQLR 355

Query: 577 SHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV---S 633
           S   S + D   + +  + R+        ++  G KE +E  + ++R        +    
Sbjct: 356 SLGFSAQYDVDQKKLKAQFRKADRVGARYVVTLGAKELAEGKLTVKRLSDGQQFSLEFTD 415

Query: 634 LLDAIPILTK 643
           L D   +L+K
Sbjct: 416 LEDKANLLSK 425


>gi|323526577|ref|YP_004228730.1| histidyl-tRNA synthetase [Burkholderia sp. CCGE1001]
 gi|323383579|gb|ADX55670.1| histidyl-tRNA synthetase [Burkholderia sp. CCGE1001]
          Length = 446

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 62/414 (14%), Positives = 121/414 (29%), Gaps = 79/414 (19%)

Query: 289 DDYEEINTPQVLDQHLWQ--QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA 346
             Y+ I TP V    L+        D     M++   A +         ++P N    V 
Sbjct: 42  YGYQNIRTPIVEHTQLFTRGIGEVTDIVEKEMYSFTDALN----GENLTMRPEN-TAAVV 96

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD--DAHVFCTKEQMFNEC 404
                     + P RL   G ++R+E         R R F Q   +A  F   +      
Sbjct: 97  RAAIEHNMLYDGPKRLWYIGPMFRHERPQR----GRYRQFHQVGVEALGFAGPDADA--- 149

Query: 405 LKIHNLIISIYKDFG--------------FEKIMVKLSTRPEKRVGSDALWDDAENIM-- 448
            +I  +   ++ D G               E+   ++          D L +DA+  +  
Sbjct: 150 -EIIMMCQRLWDDLGLTGIKLEINSLGLAEERAAHRVELIAYLEKHMDVLDEDAKRRLYT 208

Query: 449 ---------KGVLDTIKNSSQDRINTGVLLGEGAFYGP-------KFEYILKDAIGRDWQ 492
                       L  +  ++   I+         F G           + +   + R   
Sbjct: 209 NPLRVLDTKNPALQEVAQNAPKLIDFLGAESRAHFEGLQRILKANNIPFTINPRLVRGLD 268

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS--------IERFIGIMIENFKG 544
              + V   +  +  A    +   +  P++       +        IER + ++ E    
Sbjct: 269 YYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQLGGKATAACGWAMGIERILELLKEEQ-- 326

Query: 545 NLPLWLSPIQ----AIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE--TINYK--IR 596
                L P        V     +A E A  IA  L+   L +      +  + ++K  ++
Sbjct: 327 -----LVPEDEGCDVYVVHQGDAAREQAFIIAERLRDTGLDVILHCSADGQSASFKSQMK 381

Query: 597 EHSIKKIPIIIICGDKEASERSIGIR-------RFGSTTTQKVSLLDAIPILTK 643
                     ++ G+ E +  ++G++         G +    V   D    L  
Sbjct: 382 RADASGAAFAVVLGEDEIANGTVGVKPLRDTSANGGKSEQHNVPAEDLTEFLIN 435


>gi|170078923|ref|YP_001735561.1| seryl-tRNA synthetase [Synechococcus sp. PCC 7002]
 gi|238689047|sp|B1XJM0|SYS_SYNP2 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|169886592|gb|ACB00306.1| seryl-tRNA synthetase [Synechococcus sp. PCC 7002]
          Length = 427

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 63/188 (33%), Gaps = 16/188 (8%)

Query: 272 GWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G  + + LI++M  ++I   Y E+  P +++      +G    +    F     D     
Sbjct: 176 GAALERALINFMLDQQIAAGYVEVMPPVLINSDSLTGTGQLPKFAEESFRCADDD----- 230

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
                L P        ++ + +     LP+    +   +R E         GL+R+  F 
Sbjct: 231 ---LWLTPTAEVPVTNLYRYEILEAENLPIYHCAYTPCFRREAGSYGKDTRGLIRLHQFN 287

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALWDD 443
           + +   F   E    E  K+     +I +       +++L +              +W  
Sbjct: 288 KVELVKFVHPETSAAEHEKLVANAEAILQALKLPYRVLELCSGDLGFSAGKCYDLEVWLP 347

Query: 444 AENIMKGV 451
           + +  + +
Sbjct: 348 SADTYREI 355


>gi|91204894|ref|YP_537249.1| seryl-tRNA synthetase [Rickettsia bellii RML369-C]
 gi|122426103|sp|Q1RKF4|SYS_RICBR RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|91068438|gb|ABE04160.1| Seryl-tRNA synthetase [Rickettsia bellii RML369-C]
          Length = 426

 Score = 59.8 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 45/239 (18%), Positives = 85/239 (35%), Gaps = 22/239 (9%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDG--SGVIFWHRKG--WKIFQTLISY 282
            +   T     L    K+ H +L  ++DL    +    SG  F   KG   K+ + L ++
Sbjct: 120 NKLIRTHGEVDLNAQNKKQHFELGVKLDLMDFEQTAKISGARFVTLKGDLAKLERALANF 179

Query: 283 MRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
           M         + E++ P ++  +    SG    +    FA             + L P  
Sbjct: 180 MLDVHTGEFGFLEVSPPVLVRDNAMYNSGQLPKFADESFATTNG---------YRLIPTA 230

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP--SGS-LHGLMRVRGFTQDDAHVFCTK 397
               V +    +    +LP+RL  +   +R+E   SG    G++R+  F++ +     T 
Sbjct: 231 EVSLVNMVADTIIPREKLPMRLVAYTPCFRSEAGSSGRDTRGMIRLHQFSKVELVSITTP 290

Query: 398 EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENIMKGVL 452
           E+  NE   + N   +I +  G     + L T              +W   +   + + 
Sbjct: 291 EESKNEHEYMTNASETILQKLGLHYRTMLLCTGDMGFASQKTYDIEVWLPGQKQYREIA 349


>gi|317486706|ref|ZP_07945523.1| threonyl and Alanyl tRNA synthetase second additional
           domain-containing protein [Bilophila wadsworthia 3_1_6]
 gi|316922089|gb|EFV43358.1| threonyl and Alanyl tRNA synthetase second additional
           domain-containing protein [Bilophila wadsworthia 3_1_6]
          Length = 150

 Score = 59.8 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 57/130 (43%), Gaps = 5/130 (3%)

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
            H+  H++ + +  ++   +     +  D    D+   +P    E +++E+++ E++A+ 
Sbjct: 1   MHTAEHVLNQTMVRMFGCGRSFSSHLNADKSKCDYHFPRPLEDAEASELERRINEVLAQH 60

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTG 192
            P   + L  E+A +L +  +    +E       +  V +   G++    C G HV +T 
Sbjct: 61  MPVRTEMLPREEAGKLVDLGRLPAHLE----GEEELMVRIVTVGDYDICPCIGEHVENTS 116

Query: 193 QVKKFFKLMK 202
           +V  F  +  
Sbjct: 117 EVGAFRLVSH 126


>gi|315142856|gb|ADT81003.1| glutamyl- and prolyl-tRNA synthetase [Myrmekiaphila millerae]
          Length = 148

 Score = 59.8 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 52/143 (36%), Gaps = 19/143 (13%)

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           GA +    E  +  + GR  Q  T   +  N    F   + +  + +     +++  +G 
Sbjct: 9   GADFTTTVEAYVP-SNGRAIQGATSHHLGQNFSKMFEIVFEHPDTVEKQ--YVYQNSWGL 65

Query: 531 IERFIGIMIENFKGNLPLWL----SPIQAIVTTITSSA----------VEYAQEIANLLK 576
             R IG+ +     N  L L    +P Q ++     +A           E  + +   L+
Sbjct: 66  SSRSIGVAVMIHGDNAGLVLPPRVAPHQVVIVPCGVTANLPESEKKLLAEKCEALEKELR 125

Query: 577 SHHLSIETDFR-NETINYKIREH 598
              + ++ D+R N +  +K    
Sbjct: 126 EASIRVKGDYRENYSPGWKFNHW 148


>gi|167624137|ref|YP_001674431.1| seryl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
 gi|189083586|sp|B0TUP4|SYS_SHEHH RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|167354159|gb|ABZ76772.1| seryl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
          Length = 428

 Score = 59.8 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 64/188 (34%), Gaps = 12/188 (6%)

Query: 273 WKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M      +  Y E   P ++++     +G    +  ++F  K A    ++
Sbjct: 170 ARMHRALAQFMLDLHTTEHGYTEAYVPLLVNEDSLMGTGQLPKFGEDLFHTKPA---TEE 226

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
            +  +L P        +    +    ELP++L      +R+E         GL+R   F 
Sbjct: 227 GQGLSLIPTAEVPLTNLVRDTIVDEEELPIKLTAHTPCFRSEAGSYGRDTRGLIRQHQFD 286

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E       ++     ++ +  G     V L T              +W  
Sbjct: 287 KVELVQLVKPENSMQALEELTAHAETVLQKLGLPYRTVVLCTGDMGFGSSKTYDIEVWLP 346

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 347 AQNTFREI 354


>gi|123421671|ref|XP_001306033.1| Phosphoribulokinase / Uridine kinase family protein [Trichomonas
           vaginalis G3]
 gi|121887585|gb|EAX93103.1| Phosphoribulokinase / Uridine kinase family protein [Trichomonas
           vaginalis G3]
          Length = 526

 Score = 59.8 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 65/142 (45%), Gaps = 9/142 (6%)

Query: 49  DLSD-PVREGSIEIITPEDP---RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGF 104
           DL++ P+     +I  P D    R+L + RH+ +  +  ++        + I   + DG+
Sbjct: 11  DLTEFPLE----KIHDPRDEKITRTLLLSRHATSVFLLTSLYEKLFNSLLRIEHSLGDGY 66

Query: 105 YYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES 164
           Y+    +   + ++++++E ++  I+   +P     +  ++    F SK    K+ +L++
Sbjct: 67  YFIDYHKAKINDEQISKLETELHAILQSSTPIELNTMPRDELIAYFSSKGHQDKLGVLKA 126

Query: 165 IPAKENVTLYRQGEWFDLCRGP 186
                N+ + + GE+ D    P
Sbjct: 127 W-QDANIPVIKCGEFLDYVIEP 147


>gi|82617275|emb|CAI64180.1| glycyl-tRNA synthetase [uncultured archaeon]
          Length = 594

 Score = 59.8 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 56/174 (32%), Gaps = 16/174 (9%)

Query: 484 KDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHR-AVFGSIERFIGIMIEN- 541
           +D  G + +         +P     +       +   V+ H       I+R I   +E+ 
Sbjct: 406 EDLRGDEIKIEIDGEMITIPRDLVEYETVIEEVRGERVIPHVIEPSFGIDRIIYAALEHS 465

Query: 542 -----------FKGNLPLWLSPIQAIVTT--ITSSAVEYAQEIANLLKSHHLSIETDFRN 588
                         +LP  ++P+Q  V         +  A  I   L+ + + +  D   
Sbjct: 466 FSEELVAGVTRNVLHLPAEVAPVQVAVLPLLTREELIAPALAIVGTLRENGVFVSYDDSG 525

Query: 589 ETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            TI  + R +     P  +    +   + ++ IR   S    ++ + +    L 
Sbjct: 526 -TIGRRYRRNDEIGTPFSVTIDYETLDDDTVTIRDRDSMAQIRMPIGELAETLR 578



 Score = 50.6 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 3/87 (3%)

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRE-LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
            R   L+P    G    F H  + YRE LP  + + G  YRNE S    G++R+R FTQ 
Sbjct: 164 ERVGYLRPETAQGMFVDFEHLFRFYREKLPFGVTQIGKAYRNEISPR-QGVIRLREFTQA 222

Query: 390 DAHVFCTK-EQMFNECLKIHNLIISIY 415
           +A +F    E+   +   I ++++  Y
Sbjct: 223 EAEIFINPTEKNHPKFSMIEDMVLRYY 249


>gi|67458890|ref|YP_246514.1| histidyl-tRNA synthetase [Rickettsia felis URRWXCal2]
 gi|75536669|sp|Q4UM71|SYH_RICFE RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|67004423|gb|AAY61349.1| Histidyl-tRNA synthetase [Rickettsia felis URRWXCal2]
          Length = 415

 Score = 59.8 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 68/421 (16%), Positives = 135/421 (32%), Gaps = 67/421 (15%)

Query: 269 HRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
               +K+   +I+  R   +   Y++++ P +    ++ +S       +++ + +     
Sbjct: 15  LPDDYKVHDYIINKARDVGVLYGYKQMSIPILEYTKVFNRS---MGESSDVISKEIYSFL 71

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
            K   + AL+P    G +  F      ++ LP++    G V+R +   +     R R F 
Sbjct: 72  DKSNESVALRPEFTAGIIRSFISNGLQHK-LPLKFFSTGPVFRYDRPQA----GRQRQFH 126

Query: 388 QDD-----AHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWD 442
           Q +     A    T  +     + I   +            +    +R   +       +
Sbjct: 127 QLNYEYIGAKGAITDAETLKLAVDILKALEIEQDTILELNSLGCSESRSVYQQKLVEYLN 186

Query: 443 DAENIMKG------------VLDTIKNSSQD-----RINTGVLLGEGAFY---------- 475
           D ++ +              +LD+     Q       I +     E   Y          
Sbjct: 187 DFKDQLSEESKIRLTKNPMRILDSKSEIDQKIIAAAPILSEYYTDESKEYFEELIKYLDI 246

Query: 476 -GPKFEYILKDAIGRDWQCGTI----------QVDFNLPSRFNAFYVNSHSEKCHPVMIH 524
            G K+    +   G D+ C T           Q       R++       +    P +  
Sbjct: 247 LGVKYVINPRLVRGLDYYCHTAFEFTTKKLGSQSTILAGGRYDGLAKIMGNNDDVPAI-- 304

Query: 525 RAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIET 584
                 IER I +M E     +          V  I  + + YA EI + L+  ++S   
Sbjct: 305 -GFAAGIER-IALMREYNISEVKP------VFVLPIGENNICYALEIVDKLRLQNISTII 356

Query: 585 DFRNETINYKIRE--HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           D     I  +I+   +   K   II  GD+E +  S+ ++         V     + +L 
Sbjct: 357 DPVG-KIAKRIQRVLNENAK--FIIFIGDEEQANNSLKLKDLEKKEEYIVDFAKVLELLK 413

Query: 643 K 643
           K
Sbjct: 414 K 414


>gi|309792285|ref|ZP_07686757.1| seryl-tRNA synthetase [Oscillochloris trichoides DG6]
 gi|308225826|gb|EFO79582.1| seryl-tRNA synthetase [Oscillochloris trichoides DG6]
          Length = 422

 Score = 59.8 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 46/227 (20%), Positives = 90/227 (39%), Gaps = 20/227 (8%)

Query: 242 EKRDHRKLAREMDLFHIAE--DGSGVIFWHRKGW--KIFQTLISYMRRKI--KDDYEEIN 295
             + H +L   + +         SG  F+  KG   ++ + LI++M      +  Y EI 
Sbjct: 135 TPKPHWELGEALGIIDFERGVKLSGSRFFVLKGAGSRLQRALITWMLDLHTQQHGYSEIT 194

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
            P V+ + +   +G+   +  N+F ++ AD T+         P        ++   +   
Sbjct: 195 PPYVVKEDVLVGTGNLPRFGENLFRIEGADLTLI--------PTAEVPVTNLYRDEILEA 246

Query: 356 RELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
            +LP+    +   +RNE       + G+ RV  F + +   F T E  + E L + +   
Sbjct: 247 SDLPIFHVAYTPCWRNEQMSAGRDVRGIKRVYQFDKVEMVKFVTPETSYAELLTLVDNAE 306

Query: 413 SIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSS 459
            + K       ++KL       +G+  +  D E    GV + ++ SS
Sbjct: 307 DVCKALKIPYRLLKL---CTADLGTATMKYDLEMWAPGVEEWLEVSS 350


>gi|228470329|ref|ZP_04055233.1| seryl-tRNA synthetase [Porphyromonas uenonis 60-3]
 gi|228308072|gb|EEK16947.1| seryl-tRNA synthetase [Porphyromonas uenonis 60-3]
          Length = 424

 Score = 59.8 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 70/202 (34%), Gaps = 16/202 (7%)

Query: 241 SEKRDHRKLAREMDLFHIA----EDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEIN 295
           + K  H +LA++ DL          G+G   +  KG ++ + LI++ + R     + E+ 
Sbjct: 139 TAKLPHWELAKQYDLIDFELGVKITGAGFPVYRGKGARLQRALINFFLDRATAAGFMEVE 198

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
            P ++++                   K        L    L P        +F   +   
Sbjct: 199 PPIMVNE--------ASGIGTGQLPDKEGQMYHAQLDNLYLIPTAEVPVTNIFRDVILEA 250

Query: 356 RELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
            +LP+    +   +R E       + GL R+  F + +       +  + +  K+   + 
Sbjct: 251 DQLPICCTAYTPCFRREAGSYGKDVRGLNRLHQFDKVEIVSIDRPDHSWQQLDKMIAHVK 310

Query: 413 SIYKDFGFEKIMVKLSTRPEKR 434
           S+ ++      +++L       
Sbjct: 311 SLVEELELPYRILRLCGGDLSF 332


>gi|148984420|ref|ZP_01817708.1| histidyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
 gi|147923197|gb|EDK74311.1| histidyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
 gi|301800869|emb|CBW33526.1| histidyl-tRNA synthetase [Streptococcus pneumoniae OXC141]
          Length = 429

 Score = 59.8 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 61/404 (15%), Positives = 126/404 (31%), Gaps = 56/404 (13%)

Query: 276 FQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           +Q +  + R   K  +Y E+ TP       ++          ++   +  D   K  R  
Sbjct: 20  WQYVEGFAREIFKRYNYAEVRTPIF---EHYEVISRSVGDTTDIVTKEMYDFYDKGDRHI 76

Query: 335 ALKPMNCPGHVAVFNHGLKS-----YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
            L+P    G   V    +++       + P +    G ++R E   +     R+R F Q 
Sbjct: 77  TLRP---EGTAPVVRSYVENKLFAPEVQKPSKFYYMGPMFRYERPQA----GRLRQFHQI 129

Query: 390 DAHVFCTKEQM-FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWD------ 442
               F +       E + +    +      G +  +  L     +     AL D      
Sbjct: 130 GVECFGSSNPATDVETIVMAAHFLKEIGIQGVKLHLNTLGNPESRAAYRQALIDYLTPLK 189

Query: 443 -----DAENIMKG----VLDTIKNSSQDR-------INTGVLLGEGAFYGPK-------F 479
                D++  ++     VLD+ +   +         ++      +  F            
Sbjct: 190 ETLSKDSQRRLEENPLRVLDSKEKEDKVAVENAPSILDFLDEESQTHFDAVSQMLENLGV 249

Query: 480 EYILKDAI--GRDWQCGTIQVDFNLPSRFNAFYVN---SHSEKCHPVMIHRAVFG---SI 531
           +YI+   +  G D+   TI          +              +      A FG    +
Sbjct: 250 DYIIDTNMVRGLDYYNHTIFEFITEIEGNDLTVCAGGRYDGLVAYFGGPETAGFGFGLGV 309

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           ER + I+    +G      + +   +  +   A   A E+   L+      E D+ N  +
Sbjct: 310 ERLLLIL--EKQGVALPIENALDVYIAVLGDGANVKALELVQALRQQGFKAERDYLNRKL 367

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
             + +   +     +I  G+ E   R + ++   +    +VSL 
Sbjct: 368 KAQFKSADVFAAKTLITLGESEVESRQVTVKNNQTREEVQVSLE 411


>gi|329120448|ref|ZP_08249113.1| alanine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
 gi|327461906|gb|EGF08236.1| alanine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
          Length = 992

 Score = 59.8 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/164 (20%), Positives = 66/164 (40%), Gaps = 12/164 (7%)

Query: 36  KKAVAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVA 95
           K AV     G +   S  V +     +      ++ +  HS  H+M +A++ +       
Sbjct: 644 KAAVHGHF-GTLVSGSLKVGDSICAEVDNAVREAI-MRNHSVTHLMHKALRDVLGTHVEQ 701

Query: 96  IGPIIEDGF-YYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            G +       +D    Q  S++E+A++E+++   I  + P   + +S E A++      
Sbjct: 702 KGSLQNAELTRFDISHPQGISAEEIAEVERRVNAAIIANVPVKVETMSIEDAQKSGAVML 761

Query: 155 EAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
              K          + V +   G++  +LC G HV  TG +  F
Sbjct: 762 FGEKY--------GDFVRVITMGDYSIELCGGTHVTRTGDIGFF 797


>gi|323143152|ref|ZP_08077851.1| serine--tRNA ligase [Succinatimonas hippei YIT 12066]
 gi|322417079|gb|EFY07714.1| serine--tRNA ligase [Succinatimonas hippei YIT 12066]
          Length = 436

 Score = 59.8 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 65/188 (34%), Gaps = 11/188 (5%)

Query: 275 IFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL- 331
           + + L+ YM         Y E+  P +++      +G    +  ++F      +   D  
Sbjct: 172 LHRALVHYMLDLHCKHQGYTEVYVPYLVNLDSLYGTGQMPKFGEDLFHTSLNGNADGDDV 231

Query: 332 -RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFT 387
            R F L P        +    +    +LP+++      +R+E   +     GL+R+  F 
Sbjct: 232 NRHFCLIPTAEVPLTNMVRGEIIPEEKLPIKVTAHTPCFRSEAGSAGRDTRGLIRMHQFD 291

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E  +     + +   ++ +       ++ LST              +W  
Sbjct: 292 KVEMVQIVRPEDSWEALEILTHDAEAVLQGLELPYRVMTLSTGDIGFSSAKTYDLEVWLP 351

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 352 AQNTYREI 359


>gi|219684565|ref|ZP_03539508.1| alanyl-tRNA synthetase [Borrelia garinii PBr]
 gi|219671927|gb|EED28981.1| alanyl-tRNA synthetase [Borrelia garinii PBr]
          Length = 594

 Score = 59.8 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 55/130 (42%), Gaps = 10/130 (7%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           H+  H++ +A+Q +  +     G  I  +   +DF   +  + DE+ ++E+ +   I   
Sbjct: 456 HTATHLLHKALQLVLGDHVRQKGSNITAERLRFDFVHSEKMTDDEIKKVEEIVNLQIKNS 515

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTG 192
               K  +   +A++         K + L        V++Y    +  ++C GPHV +T 
Sbjct: 516 LSVKKSIMELSEAQKKGAMALFGEKYDNL--------VSVYEIDGFSLEVCGGPHVENTN 567

Query: 193 QVKKFFKLMK 202
           ++  F    +
Sbjct: 568 ELGTFKIQKE 577


>gi|332071196|gb|EGI81691.1| histidyl-tRNA synthetase [Streptococcus pneumoniae GA17545]
          Length = 429

 Score = 59.8 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 61/408 (14%), Positives = 123/408 (30%), Gaps = 64/408 (15%)

Query: 276 FQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           +Q +  + R   K  +Y E+ TP       ++          ++   +  D   K  R  
Sbjct: 20  WQYVEGFAREIFKRYNYAEVRTPIF---EHYEVISRSVGDTTDIVTKEMYDFYDKGDRHI 76

Query: 335 ALKPMNCPGHVAVFNHGLKS-----YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQ- 388
            L+P    G   V    +++       + P +    G ++R E   +     R+R F Q 
Sbjct: 77  TLRP---EGTAPVVRSYVENKLFAPEVQKPSKFYYMGPMFRYERPQA----GRLRQFHQI 129

Query: 389 --------DDAHVFCTKEQMFNE------------------------CLKIHNLIISIYK 416
                   + A    T     +                           +     ++  K
Sbjct: 130 GVECFGSSNPATDVETIVMAAHFLKEIGIQGVKLHLNTLGNPESRAAYRQALIDYLTPLK 189

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDD-AENIMKGVLDTIKNSSQDRINTG--VLLGEGA 473
           +   +    +L   P + + S    D  A      +LD +   SQ  ++    +L   G 
Sbjct: 190 ETLSKDSQRRLEENPLRVLDSKEKEDKVAVENAPSILDFLDEESQAHVDAVRQMLENLGV 249

Query: 474 FYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN---SHSEKCHPVMIHRAVFG- 529
            Y    +  +    G D+   TI          +              +      A FG 
Sbjct: 250 DYI--IDTNM--VRGLDYYNHTIFEFITEIEGNDLTVCAGGRYDGLVAYFGGPETAGFGF 305

Query: 530 --SIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFR 587
              +ER + I+    +G      + +   +  +   A   A E+   L+      E D+ 
Sbjct: 306 GLGVERLLLIL--EKQGVALPIENALDVYIAVLGDGANVKALELVQALRQQGFKAERDYL 363

Query: 588 NETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
           N  +  + +   +     +I  G+ E     + ++   +    +VSL 
Sbjct: 364 NRKLKAQFKSADVFVAKTLITLGESEVESGQVTVKNNQTREEVQVSLE 411


>gi|330829974|ref|YP_004392926.1| serine tRNA synthetase [Aeromonas veronii B565]
 gi|328805110|gb|AEB50309.1| Serine tRNA synthetase; also charges selenocystein tRNA with serine
           [Aeromonas veronii B565]
          Length = 431

 Score = 59.8 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/190 (14%), Positives = 70/190 (36%), Gaps = 11/190 (5%)

Query: 273 WKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA--VKCADDTI 328
            ++ + L  +M      +  Y E   P +++      +G    +  ++F   ++   +  
Sbjct: 170 ARLHRALAQFMLDLHTQQHGYTECYVPYLVNPDSLYGTGQLPKFAQDLFNTGIEGEGEEE 229

Query: 329 KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRG 385
             LR F+L P +      +    +   +ELP+++      +R+E         GL+R+  
Sbjct: 230 GKLRKFSLIPTSEVPLTNMARDEIFDAQELPIKMTAHSPCFRSEAGSYGRDTRGLIRMHQ 289

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALW 441
           F + +       E+ ++   ++      + +       ++ LST              +W
Sbjct: 290 FDKVEMVQLVHPEKSWDALEEMVGHAEKVLQLLELPYRVMALSTGDMGFCASKTYDLEVW 349

Query: 442 DDAENIMKGV 451
             A+N  + +
Sbjct: 350 LPAQNTYREI 359


>gi|222480484|ref|YP_002566721.1| seryl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239]
 gi|254783030|sp|B9LQZ7|SYS_HALLT RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|222453386|gb|ACM57651.1| seryl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239]
          Length = 456

 Score = 59.8 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/190 (13%), Positives = 69/190 (36%), Gaps = 8/190 (4%)

Query: 272 GWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G ++   LI +M    ++ DY ++  P  ++    + +G    +  + + ++  ++   D
Sbjct: 173 GARLEHALIQFMLDVHREQDYRDVFPPIAVNSTSMRGTGQLPKFTEDAYRIEGTNEDAYD 232

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG---SLHGLMRVRGFT 387
                L P        +    +    +LP++   +   +R E         G++RV  F 
Sbjct: 233 DDDLWLLPTAEVPVTNLHRDEILLGEDLPLKYQAYTPNFRQEAGEHGTETRGIVRVHQFN 292

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALWDD 443
           + +   F   E+       + +    + +       ++++ T              +W  
Sbjct: 293 KVEMVNFVRPEESHERFEGLVDEAEEVLRRLELPYRILEMCTGDLGFTQAKKYDLEVWAP 352

Query: 444 AENIMKGVLD 453
           A+++ +G  +
Sbjct: 353 ADDMDEGPAE 362


>gi|119498573|ref|XP_001266044.1| glycyl-tRNA synthetase [Neosartorya fischeri NRRL 181]
 gi|119414208|gb|EAW24147.1| glycyl-tRNA synthetase [Neosartorya fischeri NRRL 181]
          Length = 656

 Score = 59.8 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/216 (11%), Positives = 69/216 (31%), Gaps = 15/216 (6%)

Query: 446 NIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSR 505
             +   ++ +    ++++   +          K E  ++       +     V     +R
Sbjct: 436 KAVAAAVEALSQELREKLAIDLEKNG------KIEVDVEGVGSGKVELDQDIVKIEKRTR 489

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK---GNLPLWLSPIQAIVTTITS 562
                  + +       I R ++  IE       E+      + P  ++P + ++  +++
Sbjct: 490 VENVREYTPNVIEPSFGIGRILYSMIEHVYWAREEDEARGVLSFPPVIAPTKVLIVPLST 549

Query: 563 --SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
             S      ++   L+   +S   D  + +I  +   +     P  I    +   + +  
Sbjct: 550 HASFRPLLLQLMTKLRRMGISNRVDDSSASIGKRYARNDELGTPFGITVDFQSVKDNTFT 609

Query: 621 IRRFGSTTTQKVSLLDAIPILTK----ESLPPDCQK 652
           +R   +T   + S  + +  +      E    D +K
Sbjct: 610 LRDRDTTKQVRASEDEILQAIRSLVDGEKTWEDIRK 645


>gi|157827781|ref|YP_001496845.1| seryl-tRNA synthetase [Rickettsia bellii OSU 85-389]
 gi|166223280|sp|A8GY58|SYS_RICB8 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|157803085|gb|ABV79808.1| seryl-tRNA synthetase [Rickettsia bellii OSU 85-389]
          Length = 426

 Score = 59.8 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 45/239 (18%), Positives = 85/239 (35%), Gaps = 22/239 (9%)

Query: 227 TQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDG--SGVIFWHRKG--WKIFQTLISY 282
            +   T     L    K+ H +L  ++DL    +    SG  F   KG   K+ + L ++
Sbjct: 120 NKLIRTHGEVDLNAQNKKQHFELGVKLDLMDFEQTAKISGARFVTLKGDLAKLERALANF 179

Query: 283 MRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
           M         + E++ P ++  +    SG    +    FA             + L P  
Sbjct: 180 MLDVHTGEFGFLEVSPPVLVRDNAMYNSGQLPKFADESFATTNG---------YRLIPTA 230

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP--SGS-LHGLMRVRGFTQDDAHVFCTK 397
               V +    +    +LP+RL  +   +R+E   SG    G++R+  F++ +     T 
Sbjct: 231 EVSLVNMVADTIIPREKLPMRLVAYTPCFRSEAGSSGRDTRGMIRLHQFSKVELVSITTP 290

Query: 398 EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENIMKGVL 452
           E+  NE   + N   +I +  G     + L T              +W   +   + + 
Sbjct: 291 EESKNEHEYMTNASETILQKLGLPYRTMLLCTGDMGFASQKTYDIEVWLPGQKQYREIA 349


>gi|320120352|gb|EFE28354.2| alanine--tRNA ligase [Filifactor alocis ATCC 35896]
          Length = 881

 Score = 59.8 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/162 (20%), Positives = 67/162 (41%), Gaps = 11/162 (6%)

Query: 45  GKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDG 103
           G+V +    V +  I  I  E  R+  +  HS  H++ +A++++        G  +  + 
Sbjct: 539 GEVIEGEISVGDSMIAEIN-ESRRNETMRNHSATHLLHKALRTVLGNHVTQAGSFVTPER 597

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE 163
             +DF   +  + +EL ++E  +   I        Q ++ EKA+E         K     
Sbjct: 598 VRFDFTHFEAMTKEELQKVELAVNGAIYSYLEVTCQEMAIEKAKEKGAMALFGEKY---- 653

Query: 164 SIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKFFKLMKVA 204
                + V +   G++  +LC G HV +T ++  F  + +  
Sbjct: 654 ----GQTVRVVSMGDYSVELCGGTHVSNTSEIGMFKIVSESG 691


>gi|315142834|gb|ADT80992.1| glutamyl- and prolyl-tRNA synthetase [Myrmekiaphila fluviatilis]
          Length = 148

 Score = 59.8 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 52/143 (36%), Gaps = 19/143 (13%)

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           GA +    E  +  + GR  Q  T   +  N    F   + +  + +     +++  +G 
Sbjct: 9   GADFTTTVEAYVP-SNGRAIQGATSHHLGQNFSKMFEIVFEHPDTLEKQ--YVYQNSWGL 65

Query: 531 IERFIGIMIENFKGNLPLWL----SPIQAIVTTITSSA----------VEYAQEIANLLK 576
             R IG+ +     N  L L    +P Q ++     +A           E  + +   L+
Sbjct: 66  SSRSIGVAVMVHGDNAGLVLPPRVAPHQVVIVPCGVTANLPESEKKLLAEKCEALEKELR 125

Query: 577 SHHLSIETDFR-NETINYKIREH 598
              + ++ D+R N +  +K    
Sbjct: 126 EASIRVKGDYRENYSPGWKFNHW 148


>gi|241761554|ref|ZP_04759641.1| histidyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC
           10988]
 gi|241373862|gb|EER63395.1| histidyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC
           10988]
          Length = 419

 Score = 59.8 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 56/330 (16%), Positives = 103/330 (31%), Gaps = 61/330 (18%)

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P ++A  G V+R E         R R F Q DA V    E   +   ++ +L   + +  
Sbjct: 103 PCKIATHGPVFRYERPQK----GRYRQFHQIDAEVIGAAEPEADV--ELLSLADQLLESL 156

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDA-----------------ENIMKGVL--------- 452
           G  K  V L         S   W  A                 E + +  L         
Sbjct: 157 G-IKQHVTLHLNTLGDSASREAWRAALIEYFQGHFDSLSQESQERLTRNPLRILDSKDPN 215

Query: 453 DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
           D I       I+  +     +F+  K      DA G  W      V      R  AF   
Sbjct: 216 DKIIAEKAPIIDDYLTEEAASFF--KAVTTGLDAAGVAWTRDPRLVRGLDYYRHTAFEFI 273

Query: 513 SHSEKCHPVMIHRAVF------------------GSIERFIGIMIENFKGNLPLWLSPIQ 554
           +        ++    +                    IER + ++I+  K +         
Sbjct: 274 TDQLGAQGTVLAGGRYDGLSEALGGNLTPAIGWAAGIER-LAMLIDEPKEDTMN------ 326

Query: 555 AIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
             V  +   A   A  I + L+   +S +  +R   +  ++++ +   +   +I G++E 
Sbjct: 327 VAVIPLGEEAKNPAISILSKLRHAGISADMSWRGN-MKRRMQKANGWGVRYAVILGEEEL 385

Query: 615 SERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +     +R   +   Q ++L   +  +  E
Sbjct: 386 ARNEATVRSMVTGEQQAIALDQIVDRILSE 415


>gi|218281062|ref|ZP_03487629.1| hypothetical protein EUBIFOR_00188 [Eubacterium biforme DSM 3989]
 gi|218217684|gb|EEC91222.1| hypothetical protein EUBIFOR_00188 [Eubacterium biforme DSM 3989]
          Length = 876

 Score = 59.8 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 55/126 (43%), Gaps = 10/126 (7%)

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPIIEDGF-YYDFDKEQPFSSDELAQIEKKMQEIIAR 132
            HSC H++  A+  +  +     G      +  +DF+  +  ++++LA++E+ + E I+ 
Sbjct: 563 NHSCTHLLQSALVKVLGDHIHQAGSYNCPEYLRFDFNHYEKVTAEQLAEVERIVNEYISA 622

Query: 133 DSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE-WFDLCRGPHVRST 191
             P  K+ +  E+A++             L      + V +   G+   + C G HV +T
Sbjct: 623 AYPVTKEIMPIEEAKK--------SGATALFDEKYGDTVRVVTMGDVSKEFCAGCHVENT 674

Query: 192 GQVKKF 197
            Q+   
Sbjct: 675 AQIGLC 680


>gi|19703643|ref|NP_603205.1| histidyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|32130122|sp|Q8RGJ5|SYH_FUSNN RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|19713757|gb|AAL94504.1| Histidyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
          Length = 413

 Score = 59.8 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 64/399 (16%), Positives = 131/399 (32%), Gaps = 63/399 (15%)

Query: 288 KDDYEEINTPQVLDQHLWQ--QSGHWDSYRANMFAVKCADDTIKDLR-TFALKPMNCPGH 344
              Y  + TP   +  L++       D     M+  K   D    LR       + C   
Sbjct: 34  NYGYNFVKTPIFEETELFKRGIGEATDVVEKEMYTFKDRGDRSITLRPENTASLVRCYLE 93

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNEC 404
            A++     S      R    GS++R E   +     R R F Q    VF   E+     
Sbjct: 94  NAIYAKEEIS------RFYYNGSMFRYERPQA----GRQREFNQIGLEVFG--EKSPKVD 141

Query: 405 LKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRIN 464
            ++  +     +  G   + VK+++   K   +    +      K  LD +    +DRIN
Sbjct: 142 AEVIAIGYKFLEKLGITDLEVKINSVGSKASRTVYR-EKLIEHFKSHLDDMCEDCRDRIN 200

Query: 465 TGVL-------LGEGAFY--GPKF-EYILKDAIGR----------------DWQCGTIQV 498
              L        GE  FY   P   +Y+ +D                    +       +
Sbjct: 201 RNPLRLLDCKVDGEKDFYKSAPSIIDYLFEDERKHYDDVKKYLDIFGIKYTEDPTLVRGL 260

Query: 499 DFNLPSRFNAFYVN------------SHS---EKCHPVMIHRAVFGSIERFIGIMIENFK 543
           D+   + F                    +   E     +        +ER + ++ EN+ 
Sbjct: 261 DYYSSTVFEIVTNKLGSQGTVLGGGRYDNLLKELGDKDIPAVGFATGVERIMMLLEENYP 320

Query: 544 GNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
            N P         +  +  +  E A +IA  L+ + + +  D+  + +   +++    + 
Sbjct: 321 KNTPD------VYIAWLGENTSETALKIAESLRDNDIKVYIDYSEKGMKSHMKKADKLET 374

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
              +I G+ E ++  + ++ F +   +++ + + I  + 
Sbjct: 375 RYCVILGEDEFNKGIVLLKDFSTREQKEIKIEEIINYIK 413


>gi|325958418|ref|YP_004289884.1| glycyl-tRNA synthetase [Methanobacterium sp. AL-21]
 gi|325329850|gb|ADZ08912.1| glycyl-tRNA synthetase [Methanobacterium sp. AL-21]
          Length = 575

 Score = 59.8 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 16/96 (16%), Positives = 33/96 (34%), Gaps = 3/96 (3%)

Query: 550 LSPIQAIV--TTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIII 607
           ++PI   V          E A EI   L++  +  E D    TI  +        +P  +
Sbjct: 468 IAPIGVNVFPLVNKDKLAEKAHEIREELRNQGIIAEYDGSG-TIGRRYARSDEIGVPFAV 526

Query: 608 ICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
               +     ++ IR   +    ++ + +   +L  
Sbjct: 527 TVDHETLENNTVTIRNRDNLEQVRIPVQNVYSVLID 562



 Score = 56.7 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/201 (18%), Positives = 66/201 (32%), Gaps = 60/201 (29%)

Query: 256 FHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIK--DDYEEINTPQVLDQHLWQQSGHWDS 313
           F I    +G   +   G  +   +IS  R+     + + EI +P ++ +   + SGH D 
Sbjct: 20  FEIYSGSAGFFDYGPLGATLKNNIISKWRKYYIVGEGFYEIESPTIMPEEALKASGHVDH 79

Query: 314 Y---------RANMFAVKCADDTIKDLR-------------------------------- 332
           +            +F      + + D                                  
Sbjct: 80  FTDPMTECKDCLEVFRADHVIEDVIDDDVEGLENQRLTEIISENQIGCPKCGGHLTHVWS 139

Query: 333 ---------------TFALKPMNCPGHVAVFNHGLKSYR-ELPVRLAEFGSVYRNEPSGS 376
                          T  ++P    G    F   L+ +R +LP  + + G  YRNE S  
Sbjct: 140 YNLMFQTMIGAKGKATGYMRPETAQGIFIPFKRLLRFFRGKLPFGVVQIGKAYRNEISPR 199

Query: 377 LHGLMRVRGFTQDDAHVFCTK 397
             G++R+R FTQ +A +F   
Sbjct: 200 -QGIIRLREFTQAEAEIFVDP 219


>gi|325204570|gb|ADZ00024.1| alanyl-tRNA synthetase [Neisseria meningitidis M01-240355]
          Length = 874

 Score = 59.8 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 60/143 (41%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFS 115
            S+     ++ R+  +  HS  H+M +A++ +        G  +  +   +D    Q  +
Sbjct: 544 DSVTAKVDDEIRNANMRNHSATHLMHKALRDVLGRHVEQKGSLVTAESTRFDISHPQAVT 603

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           ++E+ ++E+++ E +  +       +S E A++         K          + V + +
Sbjct: 604 AEEITEVERRVNEAVLANVAVNAAIMSMEDAQKTGAMMLFGEKY--------GDEVRVLQ 655

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G +  +LC G HV  TG +  F
Sbjct: 656 MGGFSTELCGGTHVSRTGDIGLF 678


>gi|258545023|ref|ZP_05705257.1| alanine--tRNA ligase [Cardiobacterium hominis ATCC 15826]
 gi|258519721|gb|EEV88580.1| alanine--tRNA ligase [Cardiobacterium hominis ATCC 15826]
          Length = 876

 Score = 59.8 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/131 (22%), Positives = 58/131 (44%), Gaps = 7/131 (5%)

Query: 64  PEDPRSLAVIRH-SCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDELAQ 121
            +  R  A+ RH S  H++ +A++S         G  + E    +DF  ++  S+ ++AQ
Sbjct: 553 IDRERRAAIKRHHSATHLLHKALRSTLGTHVQQKGSLVDERRTRFDFSHDKALSAADIAQ 612

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFD 181
           +E  M   I  ++P + + +S + A++         K   +  +     V++   G   +
Sbjct: 613 VEAMMNAQILGNAPVVIEQMSRDAAQKKGAMALFGEKYGDVVRV-----VSMGDDGFSIE 667

Query: 182 LCRGPHVRSTG 192
           LC G HV   G
Sbjct: 668 LCGGTHVGRLG 678


>gi|257387357|ref|YP_003177130.1| histidyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286]
 gi|257169664|gb|ACV47423.1| histidyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286]
          Length = 436

 Score = 59.8 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 52/422 (12%), Positives = 105/422 (24%), Gaps = 72/422 (17%)

Query: 273 WKIFQTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
               Q +        +  + EI TP +    ++                +      K  R
Sbjct: 17  AAYRQVIDEIETTARQYGFREITTPALEATEMYVDKS------GEEIVEELYHFEDKGGR 70

Query: 333 TFALKPMNCPGHVAVF--NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
             AL P   P    +        S    P++       +R E         R R F Q +
Sbjct: 71  DVALTPELTPTVARMVVAKQQELSK---PIKWVSTRPFWRYEQVQQ----GRFREFHQTN 123

Query: 391 AHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP------------------- 431
             +F + E   +  +      +        +    ++S R                    
Sbjct: 124 IDIFGSSEPTADAEILAVATDMLTGLGLSADDFDFRVSHRDILTGLLESFEADVDTQDAI 183

Query: 432 -----EKRVGSDAL-------------------WDDAENIMKGVLDTIKNSSQDR---IN 464
                  ++  D                     W  A +     L  +  S Q      N
Sbjct: 184 RVVDKRAKIDRDEYVEGLTDAGLSLDQAEQFDEWLRAGDDDLDALAEMSGSEQVADAVAN 243

Query: 465 TGVLLGEGAFYGPK--FEYILKDAIGRDWQCGTIQV-----DFNLPSRFNAFYVNS--HS 515
              +L     +G +      L  A G D+  G +            + F     +     
Sbjct: 244 LEAVLAAAEDFGVREYCTISLTTARGFDYYTGVVFECFDSTGEVSRAVFGGGRYDDLIEG 303

Query: 516 EKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLL 575
               P        G +   + ++++   G  P         V  +  +    A  IA  L
Sbjct: 304 FGGEPTPAVGFAPGVMNSTLPLLLQ-RAGVWPEEAVSTDYYVLQVGDT-RPVAARIAREL 361

Query: 576 KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
           +     +E D  + +   ++          ++I G+ +     + ++   S       + 
Sbjct: 362 RESGHVVEADVSDRSFGAQMGYADSINAETVVIVGENDLENDEVTVKDMASGEQTTAPVD 421

Query: 636 DA 637
             
Sbjct: 422 AF 423


>gi|242373930|ref|ZP_04819504.1| histidyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
 gi|242348484|gb|EES40086.1| histidyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
          Length = 430

 Score = 59.8 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 40/87 (45%)

Query: 557 VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASE 616
           + T+   A  YA ++ N L+ + +  + D+ N  I  ++++         I+ GD+E   
Sbjct: 344 IVTMGEEADRYAVKLLNELRKNGVKADKDYLNRKIKGQMKQADRLNAKYTIVIGDQELEN 403

Query: 617 RSIGIRRFGSTTTQKVSLLDAIPILTK 643
            SI I+   S  ++KV L   +    +
Sbjct: 404 NSIDIKHMASGESEKVQLDQLVDYFKE 430


>gi|301310907|ref|ZP_07216836.1| alanine--tRNA ligase [Bacteroides sp. 20_3]
 gi|300830970|gb|EFK61611.1| alanine--tRNA ligase [Bacteroides sp. 20_3]
          Length = 873

 Score = 59.8 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/219 (15%), Positives = 72/219 (32%), Gaps = 27/219 (12%)

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIA 131
             HS  H++ EA++ +        G  +  D   +DF   Q  + +E+ ++E  + E I 
Sbjct: 561 CNHSATHLLHEALREVLGTHVEQKGSYVSPDSLRFDFSHFQKVTDEEIRKVEILVGEKIR 620

Query: 132 RDSPFL-KQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRS 190
            + P    + +   +A+ L        K          + V + + G   +LC G H+ +
Sbjct: 621 ANFPLEEHRNMPIAEAKALGAMALFGEKY--------GDEVRVVKYGSSVELCGGTHIPA 672

Query: 191 TGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLA 250
           TG +     + + +       +               Q    Q     E     +H    
Sbjct: 673 TGMIGSLRVIGESSI------AAGVRRIEAVTAEGAEQFVYAQQDLIRELRALMNHMPNL 726

Query: 251 REMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
            +     I E+            ++ + +  Y+R K   
Sbjct: 727 AQAMKKSIEEN-----------AEMKKQIEDYIREKSMR 754


>gi|300709494|ref|YP_003735308.1| glycyl-tRNA synthetase [Halalkalicoccus jeotgali B3]
 gi|299123177|gb|ADJ13516.1| glycyl-tRNA synthetase [Halalkalicoccus jeotgali B3]
          Length = 600

 Score = 59.8 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/178 (15%), Positives = 61/178 (34%), Gaps = 23/178 (12%)

Query: 484 KDAIGRDWQCGTIQVDFNLPS------RFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
           +D    D +  ++++D            F+   V    E   P ++       + R +  
Sbjct: 397 RDRSAFDDETVSVELDDESYEVPTEKTGFSIEEVTESGEHVTPHVV--EPSFGVGRTLYA 454

Query: 538 MI------------ENFKGNLPLWLSPIQAIV--TTITSSAVEYAQEIANLLKSHHLSIE 583
           +             E    +L   ++P    V          E A+E+A+ L++  L + 
Sbjct: 455 LFAHAYREDEVDGEERSYLSLAPEMAPTTVGVFPLMDRDGLGERARELASELRAAGLEVA 514

Query: 584 TDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
            D     I  + R       P  +    +   + ++ +R   STT  +V ++  + +L
Sbjct: 515 YDDSGN-IGRRYRRQDEVGTPFCVTVDYESLEDGTVTLRDRDSTTQVRVPIVQLVGVL 571



 Score = 44.4 bits (103), Expect = 0.057,   Method: Composition-based stats.
 Identities = 22/89 (24%), Positives = 42/89 (47%), Gaps = 2/89 (2%)

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
               +T  ++P    G    F    + +  +LP  + + G  YRNE S    G++RVR F
Sbjct: 160 PGSGQTGYMRPETAQGIFVEFPQLAEYARNQLPFGVTQIGPAYRNEISPR-KGIIRVREF 218

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           TQ +   F   E+   +  ++ ++ +++Y
Sbjct: 219 TQAELEQFVDPERDEPDLSRVSDVEVTLY 247


>gi|255015752|ref|ZP_05287878.1| alanyl-tRNA synthetase [Bacteroides sp. 2_1_7]
          Length = 873

 Score = 59.8 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/219 (15%), Positives = 72/219 (32%), Gaps = 27/219 (12%)

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIA 131
             HS  H++ EA++ +        G  +  D   +DF   Q  + +E+ ++E  + E I 
Sbjct: 561 CNHSATHLLHEALREVLGTHVEQKGSYVSPDSLRFDFSHFQKVTDEEIRKVEILVGEKIR 620

Query: 132 RDSPFL-KQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRS 190
            + P    + +   +A+ L        K          + V + + G   +LC G H+ +
Sbjct: 621 ANFPLEEHRNMPIAEAKALGAMALFGEKY--------GDEVRVVKYGSSVELCGGTHIPA 672

Query: 191 TGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLA 250
           TG +     + + +       +               Q    Q     E     +H    
Sbjct: 673 TGMIGSLRVIGESSI------AAGVRRIEAVTAEGAEQFVYAQQDLIRELRALMNHMPNL 726

Query: 251 REMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKIKD 289
            +     I E+            ++ + +  Y+R K   
Sbjct: 727 AQAMKKSIEEN-----------AEMKKQIEDYIREKSMR 754


>gi|218263553|ref|ZP_03477634.1| hypothetical protein PRABACTJOHN_03322 [Parabacteroides johnsonii
           DSM 18315]
 gi|218222676|gb|EEC95326.1| hypothetical protein PRABACTJOHN_03322 [Parabacteroides johnsonii
           DSM 18315]
          Length = 451

 Score = 59.8 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 15/92 (16%), Positives = 34/92 (36%)

Query: 550 LSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIIC 609
           L   Q +          Y   + + +++  +  E       +  ++     KKIP + I 
Sbjct: 360 LKTTQLLFVNFGEKEENYLLPLISKVRAAGIRTELYPEAAKMKKQMGYADTKKIPFVAIV 419

Query: 610 GDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           G+ E +E  I ++   +     V++ + I   
Sbjct: 420 GENEINEGKINLKNMLTGEQSLVTIEELIERF 451


>gi|257076309|ref|ZP_05570670.1| histidyl-tRNA synthetase [Ferroplasma acidarmanus fer1]
          Length = 429

 Score = 59.8 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 59/405 (14%), Positives = 119/405 (29%), Gaps = 66/405 (16%)

Query: 290 DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFN 349
            Y+ I+ P +    L++           +   +    T K  R   + P   P  V +  
Sbjct: 35  GYQLIDFPSLEPLDLYRLKS-----GTEIVN-QTFSFTDKGGREVTMIPEATPSTVRLLT 88

Query: 350 HGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
                 R  PVR   F  V+R E         R R   Q +A VF    +  +  +    
Sbjct: 89  ARKDLPR--PVRWYSFPKVWRYEEPQE----GRFREHYQFNADVFGLDSEEADAEIVGLA 142

Query: 410 LIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDD-------------------------- 443
             I  Y        +        + V  D   +D                          
Sbjct: 143 SSILDYLGLSGVYEININDRFLMEYVLKDLNIEDIPDAFSIIDKYKKVDKSSFIEAFKGI 202

Query: 444 --AENIMKGVLDTIKNS-----SQDRINTGVLLGE----------------GAFYGPKFE 480
              E+ +K +L  +         + +I   V   E                G +   K  
Sbjct: 203 GAGEDEIKKILSLLGEKVDIGNMEKKIKRVVNNYEEIKPRIERIKKTFDLIGLYTESKIN 262

Query: 481 YILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIE 540
           +      G  +  G +   F++     A       +    +     +  +       +IE
Sbjct: 263 FDFSIVRGLSYYTGIVFEAFDVKGELRAILGGGRYDGLSQLFTQEKIPAAGFAIGDAVIE 322

Query: 541 NFKGNLPLWLSP---IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
                  LWL         +  ++S   +Y  ++A++++S +     D  +  I+ +++ 
Sbjct: 323 LLLKRQNLWLKRNIKESYYICNLSSENDDYIIKVASVIRSLNKIAVVDMTHRKISSQMKS 382

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            S       +I G++E  E ++ ++   S+    +   +    L 
Sbjct: 383 AS--GFDFAVIIGEREIEENTLTVKNMHSSEQSTIGYDEFFLKLR 425


>gi|152991270|ref|YP_001356992.1| alanyl-tRNA synthetase [Nitratiruptor sp. SB155-2]
 gi|205830162|sp|A6Q576|SYA_NITSB RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|151423131|dbj|BAF70635.1| alanyl-tRNA synthetase [Nitratiruptor sp. SB155-2]
          Length = 850

 Score = 59.8 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/152 (21%), Positives = 69/152 (45%), Gaps = 11/152 (7%)

Query: 55  REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQP 113
           ++ ++E +  +  R +    HS  HI+  A++ I  E     G ++E +   +DF   +P
Sbjct: 534 KDEAVEAVVDKSRREI-AKHHSATHILHSALRKILGEHVTQQGSLVEANRLRFDFSHPKP 592

Query: 114 FSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTL 173
            ++ E+ +IE  + E+IA+      + +  +KA+E         K          + V +
Sbjct: 593 LNAQEIERIENFVNEVIAQGIEAKVEEMPIDKAKEKGAMALFGEKY--------GDVVRV 644

Query: 174 YRQGE-WFDLCRGPHVRSTGQVKKFFKLMKVA 204
              G+   +LC G HV+++ ++  FF   +  
Sbjct: 645 VEFGDVSVELCGGTHVKNSAEIGSFFITKESG 676


>gi|330507921|ref|YP_004384349.1| glycyl-tRNA synthetase [Methanosaeta concilii GP-6]
 gi|328928729|gb|AEB68531.1| glycyl-tRNA synthetase [Methanosaeta concilii GP-6]
          Length = 581

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/95 (18%), Positives = 38/95 (40%), Gaps = 3/95 (3%)

Query: 550 LSPIQAIVTTITS--SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIII 607
           ++PI+  V  +      V  A++I   L+S  +  + D    +I  + R +     P  +
Sbjct: 466 VAPIEVAVLPLMDRSELVGPAKKILEELRSRGMRTDYDTSG-SIGRRYRRNDEIGTPYEV 524

Query: 608 ICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
               +   E ++ IR   S +  +V+    +  L 
Sbjct: 525 TIDYETIEEGTVTIRDRDSMSQVRVARWQVVDKLQ 559



 Score = 47.9 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 65/206 (31%), Gaps = 60/206 (29%)

Query: 270 RKGWKIFQTLISYMRRK--IKDDYEEINTPQVLDQHLWQQSGHWDSY------------- 314
             G  + + +    R+   I + + EI  P +  + ++Q SGH   +             
Sbjct: 35  PLGAPLKRRIEDIWRQYFVIAEGFAEIEAPTIGVEGIFQASGHLSGFSDPLTGCKECKEV 94

Query: 315 ------------------RANMFAVKCADD------------------------TIKDLR 332
                                ++     ++                           +  
Sbjct: 95  YRADHLIKHIIEVPDALTNEEIYRCMQENEITCPECGGELSSVYEFNLMFKTMIGPGNKM 154

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRE-LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDA 391
           T  ++P    G    F   L+ +R  LP    + G  YRNE S    G++R+R FTQ +A
Sbjct: 155 TGYMRPETAQGMFINFPRLLRYFRGALPFAAVQIGKSYRNEISPR-QGVIRLREFTQAEA 213

Query: 392 HVFCTK-EQMFNECLKIHNLIISIYK 416
            +F    ++      ++  + +  Y 
Sbjct: 214 EIFIDPRDKTHPRFDEVKAIRMKFYS 239


>gi|319787313|ref|YP_004146788.1| seryl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1]
 gi|317465825|gb|ADV27557.1| seryl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1]
          Length = 425

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 69/188 (36%), Gaps = 15/188 (7%)

Query: 273 WKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M      +  YEE N P +++    + +G    +  ++F+ +  +     
Sbjct: 170 ARLHRALAQFMLDLHTGEHGYEETNVPVIVNADSLRGTGQLPKFEEDLFSTELGEH---- 225

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
            R + + P +      +   G+    +LP+R+      +R+E       + G++R   F 
Sbjct: 226 -RRYLI-PTSEVPLTNIVRDGILDGDKLPLRMTAHSMCFRSEAGSGGRDVRGMIRQHQFE 283

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E+   E  ++      + +  G     + L T              +W  
Sbjct: 284 KVELVSITRPEESDAEHERMTRCAEVVLEKLGLPYRRMLLCTGDMGFSARKTYDLEVWLP 343

Query: 444 AENIMKGV 451
           +++  + +
Sbjct: 344 SQHTYREI 351


>gi|315142850|gb|ADT81000.1| glutamyl- and prolyl-tRNA synthetase [Myrmekiaphila torreya]
          Length = 148

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 53/143 (37%), Gaps = 19/143 (13%)

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           GA +    E  L  + GR  Q  T   +  N    F   + +  + +     +++  +G 
Sbjct: 9   GADFTTTVEAYLP-SNGRAIQGATSHHLGQNFSKMFEIVFEHPDTVEKQ--YVYQNSWGL 65

Query: 531 IERFIGIMIENFKGN----LPLWLSPIQAIVTTITSSA----------VEYAQEIANLLK 576
             R IG+ +     N    LP  ++P Q ++     +A           E  + +   L+
Sbjct: 66  SSRSIGVAVMVHGDNSGLVLPPRVAPHQVVIVPCGVTANLPESEKKLLAEKCEALEKELR 125

Query: 577 SHHLSIETDFR-NETINYKIREH 598
              + ++ D+R N +  +K    
Sbjct: 126 EASIRVKGDYRENYSPGWKFNHW 148


>gi|269302656|gb|ACZ32756.1| seryl-tRNA synthetase [Chlamydophila pneumoniae LPCoLN]
          Length = 427

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 51/316 (16%), Positives = 104/316 (32%), Gaps = 52/316 (16%)

Query: 246 HRKLAREMDLFHIA----EDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVL 300
           H +L +E+D+          GSG   +  +G  +   L++YM +++    ++    P ++
Sbjct: 139 HLELNQELDILDFQAAAKTTGSGWPAYKNRGVLLEWALLTYMLQKQAAHGFQLWLPPLLV 198

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            + +   SG    +    + V+  +      +   L P          +  + + +ELP+
Sbjct: 199 KKEILFGSGQIPKFDGQYYRVEDGE------QYLYLIPTAEVVLNGFRSQDILTEKELPL 252

Query: 361 RLAEFGSVYRNE---PSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
             A     +R E         GL+RV  F + +   F T  Q      K+ +++  +  +
Sbjct: 253 YYAACTPCFRREAGAAGAQERGLVRVHQFHKVEMFAFTTPNQDDIAYEKMLSIVEEMLTE 312

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
                 +  LST       S  +  DAE  +                     G+ AFY  
Sbjct: 313 LKLPYRLSLLSTGDMSFTASKTI--DAEVWL--------------------PGQKAFY-- 348

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
                              Q       R    Y +S  +      ++ +   +  R +  
Sbjct: 349 -------------EVSSISQCTDFQSRRSGTRYKDSQGKLQFVHTLNGSGLAT-PRLLVA 394

Query: 538 MIENFKGNLPLWLSPI 553
           ++EN +      + P 
Sbjct: 395 ILENNQQADGSVVIPE 410


>gi|28210757|ref|NP_781701.1| alanyl-tRNA synthetase [Clostridium tetani E88]
 gi|41018208|sp|Q896F2|SYA_CLOTE RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|28203195|gb|AAO35638.1| alanyl-tRNA synthetase [Clostridium tetani E88]
          Length = 879

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/153 (24%), Positives = 68/153 (44%), Gaps = 16/153 (10%)

Query: 53  PVREGSIEI-----ITPEDPRSLAVI-RHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFY 105
            + EGSI++     +T +  R  A+   HS  H++ EA++ I        G  + E    
Sbjct: 538 EILEGSIKLQDTVNLTVDRLRRDAIRKNHSATHLLHEALKKIVGAHIEQAGSFVDEHRLR 597

Query: 106 YDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESI 165
           +DF+     + +EL  +EK + + I    P   + ++ E+A+E         K       
Sbjct: 598 FDFNHFSSLTKEELKNVEKLVNKKIMEVIPVNTKVMNIEEAKESGAVALFDEKY------ 651

Query: 166 PAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
              E V +   G++  +LC G HV ++G++  F
Sbjct: 652 --DEKVRVVSLGDFSKELCGGTHVSNSGEIGLF 682


>gi|15618779|ref|NP_225065.1| seryl-tRNA synthetase [Chlamydophila pneumoniae CWL029]
 gi|15836403|ref|NP_300927.1| seryl-tRNA synthetase [Chlamydophila pneumoniae J138]
 gi|16752169|ref|NP_445536.1| seryl-tRNA synthetase [Chlamydophila pneumoniae AR39]
 gi|33242230|ref|NP_877171.1| seryl-tRNA synthetase [Chlamydophila pneumoniae TW-183]
 gi|8928381|sp|Q9Z736|SYS_CHLPN RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|4377187|gb|AAD19008.1| Seryl tRNA Synthetase-2 [Chlamydophila pneumoniae CWL029]
 gi|7189912|gb|AAF38777.1| seryl-tRNA synthetase [Chlamydophila pneumoniae AR39]
 gi|8979244|dbj|BAA99078.1| seryl tRNA synthetase-2 [Chlamydophila pneumoniae J138]
 gi|33236741|gb|AAP98828.1| seryl-tRNA synthetase [Chlamydophila pneumoniae TW-183]
          Length = 427

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 51/316 (16%), Positives = 104/316 (32%), Gaps = 52/316 (16%)

Query: 246 HRKLAREMDLFHIA----EDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINTPQVL 300
           H +L +E+D+          GSG   +  +G  +   L++YM +++    ++    P ++
Sbjct: 139 HLELNQELDILDFQAAAKTTGSGWPAYKNRGVLLEWALLTYMLQKQAAHGFQLWLPPLLV 198

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
            + +   SG    +    + V+  +      +   L P          +  + + +ELP+
Sbjct: 199 KKEILFGSGQIPKFDGQYYRVEDGE------QYLYLIPTAEVVLNGFRSQDILTEKELPL 252

Query: 361 RLAEFGSVYRNE---PSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
             A     +R E         GL+RV  F + +   F T  Q      K+ +++  +  +
Sbjct: 253 YYAACTPCFRREAGAAGAQERGLVRVHQFHKVEMFAFTTPNQDDIAYEKMLSIVEEMLTE 312

Query: 418 FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGP 477
                 +  LST       S  +  DAE  +                     G+ AFY  
Sbjct: 313 LKLPYRLSLLSTGDMSFTASKTI--DAEVWL--------------------PGQKAFY-- 348

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI 537
                              Q       R    Y +S  +      ++ +   +  R +  
Sbjct: 349 -------------EVSSISQCTDFQSRRSGTRYKDSQGKLQFVHTLNGSGLAT-PRLLVA 394

Query: 538 MIENFKGNLPLWLSPI 553
           ++EN +      + P 
Sbjct: 395 ILENNQQADGSVVIPE 410


>gi|94309640|ref|YP_582850.1| seryl-tRNA synthetase [Cupriavidus metallidurans CH34]
 gi|166223277|sp|Q1LQJ5|SYS_RALME RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|93353492|gb|ABF07581.1| seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with
           serine [Cupriavidus metallidurans CH34]
          Length = 435

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/225 (17%), Positives = 82/225 (36%), Gaps = 15/225 (6%)

Query: 242 EKRDHRKLAREMDL-FHIAEDGSGVIF-WHRKG-WKIFQTLISYMRRK--IKDDYEEINT 296
           E +DH  +   + L F  A   +G  F + R G  ++ + L+  M     ++  Y E+  
Sbjct: 135 EIKDHVDVGARLGLDFETATKVTGSRFAFLRGGVARMHRALVQLMVDTHTLEHGYTEMYV 194

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAV--KCADDTIKDL-RTFALKPMNCPGHVAVFNHGLK 353
           P +++    + +G    +  ++F V  K   +  +D    F L P        V    + 
Sbjct: 195 PYIVNAASMRGTGQLPKFEDDLFKVPRKVGGEDGQDAIENFYLIPTAEVPLTNVVRDAIV 254

Query: 354 SYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
           +  +LP+R       +R+E         G++R   F + +       EQ  +   ++   
Sbjct: 255 AAEKLPLRFVAHTPCFRSEAGSYGKDTRGMIRQHQFDKVEMVQVVPSEQSMDALEQMTGH 314

Query: 411 IISIYKD----FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
             +I K     F    +          +     +W  A+N  + +
Sbjct: 315 AETILKKLELPFRTVVLCTGDMGFGSTKTYDIEVWIPAQNTYREI 359


>gi|261392163|emb|CAX49673.1| alanyl-tRNA synthetase (alanine--tRNA ligase; AlaRS) [Neisseria
           meningitidis 8013]
          Length = 874

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 60/143 (41%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFS 115
            S+     ++ R+  +  HS  H+M +A++ +        G  +  +   +D    Q  +
Sbjct: 544 DSVTAKVDDEIRNANMRNHSATHLMHKALRDVLGRHVEQKGSLVTAESTRFDISHPQAVT 603

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           ++E+ ++E+++ E +  +       +S E A++         K          + V + +
Sbjct: 604 AEEITEVERRVNEAVLANVAVNAAIMSMEDAQKTGAMMLFGEKY--------GDEVRVLQ 655

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G +  +LC G HV  TG +  F
Sbjct: 656 MGGFSTELCGGTHVSRTGDIGLF 678


>gi|119946985|ref|YP_944665.1| alanyl-tRNA synthetase [Psychromonas ingrahamii 37]
 gi|205830184|sp|A1T001|SYA_PSYIN RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|119865589|gb|ABM05066.1| alanyl-tRNA synthetase [Psychromonas ingrahamii 37]
          Length = 867

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 64/163 (39%), Gaps = 28/163 (17%)

Query: 40  AVAINGKV---CDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAI 96
           +V +N KV    D +                R    + HS  H++  A++    E     
Sbjct: 532 SVKVNDKVHAEVDTAR---------------RQSIALHHSATHLLHAALRKTLGEHVTQK 576

Query: 97  GPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKE 155
           G +++ D   +DF   +  S+D L+++   + E I  +   + + +  E+A+        
Sbjct: 577 GSLVDADKLRFDFSHFEALSADSLSEVTFLVNEAIRNNYEVVTKLMDIEEAKSSNAMALF 636

Query: 156 AYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
             K          E V + + G++  +LC G H + TG +  F
Sbjct: 637 GEKY--------DEMVRVVQMGDFSTELCGGTHAKRTGDLGLF 671


>gi|22126673|ref|NP_670096.1| seryl-tRNA synthetase [Yersinia pestis KIM 10]
 gi|45441041|ref|NP_992580.1| seryl-tRNA synthetase [Yersinia pestis biovar Microtus str. 91001]
 gi|51595744|ref|YP_069935.1| seryl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
 gi|108806666|ref|YP_650582.1| seryl-tRNA synthetase [Yersinia pestis Antiqua]
 gi|108812762|ref|YP_648529.1| seryl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|145599588|ref|YP_001163664.1| seryl-tRNA synthetase [Yersinia pestis Pestoides F]
 gi|149366636|ref|ZP_01888670.1| seryl-tRNA synthetase [Yersinia pestis CA88-4125]
 gi|153948058|ref|YP_001401558.1| seryl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
 gi|162418210|ref|YP_001606120.1| seryl-tRNA synthetase [Yersinia pestis Angola]
 gi|165924544|ref|ZP_02220376.1| seryl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165938994|ref|ZP_02227547.1| seryl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|166009792|ref|ZP_02230690.1| seryl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166211248|ref|ZP_02237283.1| seryl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167400076|ref|ZP_02305594.1| seryl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167419704|ref|ZP_02311457.1| seryl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167424036|ref|ZP_02315789.1| seryl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|170024906|ref|YP_001721411.1| seryl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
 gi|186894822|ref|YP_001871934.1| seryl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
 gi|218928527|ref|YP_002346402.1| seryl-tRNA synthetase [Yersinia pestis CO92]
 gi|229841348|ref|ZP_04461507.1| Seryl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229843453|ref|ZP_04463599.1| Seryl-tRNA synthetase [Yersinia pestis biovar Orientalis str. India
           195]
 gi|229895825|ref|ZP_04510995.1| Seryl-tRNA synthetase [Yersinia pestis Pestoides A]
 gi|229903171|ref|ZP_04518284.1| seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with
           serine [Yersinia pestis Nepal516]
 gi|270486966|ref|ZP_06204040.1| serine--tRNA ligase [Yersinia pestis KIM D27]
 gi|294503369|ref|YP_003567431.1| seryl-tRNA synthetase [Yersinia pestis Z176003]
 gi|30173194|sp|Q8ZGC4|SYS_YERPE RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|67461725|sp|Q66CJ9|SYS_YERPS RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|123072932|sp|Q1CA85|SYS_YERPA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|123246327|sp|Q1CGF1|SYS_YERPN RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|166223311|sp|A4TN29|SYS_YERPP RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|166987319|sp|A7FJY0|SYS_YERP3 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|238687315|sp|A9R5V2|SYS_YERPG RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|238688567|sp|B1JRF0|SYS_YERPY RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|238691445|sp|B2KA12|SYS_YERPB RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|21959689|gb|AAM86347.1|AE013883_1 serine tRNA synthetase [Yersinia pestis KIM 10]
 gi|45435900|gb|AAS61457.1| seryl-tRNA synthetase [Yersinia pestis biovar Microtus str. 91001]
 gi|51589026|emb|CAH20644.1| seryl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
 gi|108776410|gb|ABG18929.1| seryl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|108778579|gb|ABG12637.1| seryl-tRNA synthetase [Yersinia pestis Antiqua]
 gi|115347138|emb|CAL20031.1| seryl-tRNA synthetase [Yersinia pestis CO92]
 gi|145211284|gb|ABP40691.1| seryl-tRNA synthetase [Yersinia pestis Pestoides F]
 gi|149291010|gb|EDM41085.1| seryl-tRNA synthetase [Yersinia pestis CA88-4125]
 gi|152959553|gb|ABS47014.1| seryl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
 gi|162351025|gb|ABX84973.1| seryl-tRNA synthetase [Yersinia pestis Angola]
 gi|165913141|gb|EDR31765.1| seryl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|165923604|gb|EDR40736.1| seryl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165991188|gb|EDR43489.1| seryl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166207019|gb|EDR51499.1| seryl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166962445|gb|EDR58466.1| seryl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167050784|gb|EDR62192.1| seryl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167056885|gb|EDR66648.1| seryl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|169751440|gb|ACA68958.1| seryl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
 gi|186697848|gb|ACC88477.1| seryl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
 gi|229678941|gb|EEO75044.1| seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with
           serine [Yersinia pestis Nepal516]
 gi|229689800|gb|EEO81861.1| Seryl-tRNA synthetase [Yersinia pestis biovar Orientalis str. India
           195]
 gi|229697714|gb|EEO87761.1| Seryl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229700748|gb|EEO88777.1| Seryl-tRNA synthetase [Yersinia pestis Pestoides A]
 gi|262361409|gb|ACY58130.1| seryl-tRNA synthetase [Yersinia pestis D106004]
 gi|262365054|gb|ACY61611.1| seryl-tRNA synthetase [Yersinia pestis D182038]
 gi|270335470|gb|EFA46247.1| serine--tRNA ligase [Yersinia pestis KIM D27]
 gi|294353828|gb|ADE64169.1| seryl-tRNA synthetase [Yersinia pestis Z176003]
 gi|320015764|gb|ADV99335.1| Seryl-tRNA synthetase [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 430

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 60/188 (31%), Gaps = 10/188 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M     +   Y E   P +++      +G    +  ++F  K   +   D
Sbjct: 170 ARMHRALSQFMLDLHTEKHGYLEAYVPYLVNHATLYGTGQLPKFGEDLFHTKPLAEE-SD 228

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
              +AL P        +    +     LP++L      +R+E         GL+R+  F 
Sbjct: 229 NSNYALIPTAEVPLTNLVRDEILEEDSLPLKLTAHTPCFRSEAGSYGRDTRGLIRMHQFD 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E       ++      + +        V L T              +W  
Sbjct: 289 KVEMVQITRPEDSMAALEELTGHAEKVLQLLELPYRKVLLCTGDMGFGSSKTYDLEVWLP 348

Query: 444 AENIMKGV 451
           A++  + +
Sbjct: 349 AQDTYREI 356


>gi|317484827|ref|ZP_07943721.1| RelA/SpoT family protein [Bilophila wadsworthia 3_1_6]
 gi|316923921|gb|EFV45113.1| RelA/SpoT family protein [Bilophila wadsworthia 3_1_6]
          Length = 738

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 1/60 (1%)

Query: 10  PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITPEDPR 68
           P G +K  P  AT  D A  I   +  + V   +NGK+  L+  ++ G ++EIIT ++ R
Sbjct: 404 PAGDVKELPEGATPLDFAFLIHTQVGSRCVGAKVNGKLVPLNTALKSGDTVEIITDKNRR 463


>gi|302338418|ref|YP_003803624.1| histidyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
 gi|301635603|gb|ADK81030.1| histidyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
          Length = 435

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/109 (16%), Positives = 43/109 (39%), Gaps = 3/109 (2%)

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           +R +  + E   G      S     +  I  S   Y   +A  ++   LS E   +++ +
Sbjct: 320 DRLVAALEE--LGKAGGSTSAPAVAIFNIDESLSGYYHMLAGKVRKAGLSCEVQLQSQKL 377

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV-SLLDAIP 639
             +      + I + +ICG  E +   + ++   +  ++ +  + +AI 
Sbjct: 378 GKQFAWAEKRGIRMALICGGDEKNAGKVSVKNLATRESRNMIDIKEAID 426


>gi|157813054|gb|ABV81272.1| putative bifunctional aminoacyl-tRNA synthetase [Forficula
           auricularia]
          Length = 134

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 40/132 (30%), Gaps = 16/132 (12%)

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSI 531
           G  Y    E     A GR  Q  T        SR          E      +++  +G  
Sbjct: 1   GGNYTTTTE-AFIAASGRAIQGATSHHLGQNFSRMFEITF-EDPETQKEQYVYQNSWGLT 58

Query: 532 ERFIGIMIENFKGNLPLWLSPI----QAIVTT----------ITSSAVEYAQEIANLLKS 577
            R IG+MI     N  L L P     Q ++               +  +  + +   L  
Sbjct: 59  TRVIGVMIMVHADNQGLVLPPKVASKQVVIIPCGISVNLSQPARDALFDTCRRLEQNLID 118

Query: 578 HHLSIETDFRNE 589
             + ++ D R+ 
Sbjct: 119 LGIRVKCDLRDN 130


>gi|78355243|ref|YP_386692.1| seryl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|123768909|sp|Q316Z9|SYS_DESDG RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|78217648|gb|ABB36997.1| seryl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 427

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/284 (12%), Positives = 85/284 (29%), Gaps = 28/284 (9%)

Query: 185 GPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRI-YGTAWNTQQELTQYLYFLEES-E 242
           G        +    + +K     W           +  G   N    L  +         
Sbjct: 76  GALSDRIKTLDAETETVKAEVHQWLISLPNIPHESVPAGADENDNVFLHAWGEKPSFDFT 135

Query: 243 KRDHRKLAREMDLFHIAEDG------SGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEI 294
            ++H ++   + L             + +  W     K+ + L ++          Y E+
Sbjct: 136 PKEHWEIGPALGLDFERGSRLTGSRFTVLWHW---AAKLERALTAFFLDVHTREHGYMEV 192

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
             P +++      +G    +  ++F ++ +         + L P        + +  +  
Sbjct: 193 YPPAMVNAQTMTGTGQLPKFEEDLFKLRDS--------EYYLIPTAEVPLTNLHSGEVVP 244

Query: 355 YRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI 411
             +LP+        +R+E         G +R   FT+ +   F   E+ F E  K+ +  
Sbjct: 245 EEKLPIAYTAQTQCFRSEAGSYGKDTKGFIRQHQFTKVEMVRFAHPEKSFEELEKLRSHA 304

Query: 412 ISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
             + +  G    +V L +              +W   ++  + +
Sbjct: 305 EVLLQKLGLHYRVVTLCSGDMGFSAAKTYDLEVWLPGQDKYREI 348


>gi|83312631|ref|YP_422895.1| alanyl-tRNA synthetase [Magnetospirillum magneticum AMB-1]
 gi|123541005|sp|Q2W1D9|SYA_MAGMM RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|82947472|dbj|BAE52336.1| Alanyl-tRNA synthetase [Magnetospirillum magneticum AMB-1]
          Length = 878

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 49/126 (38%), Gaps = 10/126 (7%)

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIAR 132
            HS  H++  A++ I  +     G  +  D   +DF   +  S++E   +E ++   I  
Sbjct: 569 HHSATHLLHAALRDILGDHVTQKGSQVGPDRLRFDFAHTKALSAEETRAVEAEVNRRIRL 628

Query: 133 DSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE-WFDLCRGPHVRST 191
           ++    + ++ + A +         K          E V +   G+   +LC G H   T
Sbjct: 629 NAEVATKVMTPDDAIKAGAMALFGEKY--------GEEVRVVSMGDLSTELCGGTHANRT 680

Query: 192 GQVKKF 197
           G +  F
Sbjct: 681 GDIGGF 686


>gi|225857695|ref|YP_002739206.1| histidyl-tRNA synthetase [Streptococcus pneumoniae P1031]
 gi|254782351|sp|C1CNA0|SYH_STRZP RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|225726000|gb|ACO21852.1| histidyl-tRNA synthetase [Streptococcus pneumoniae P1031]
 gi|332071392|gb|EGI81886.1| histidyl-tRNA synthetase [Streptococcus pneumoniae GA41301]
          Length = 429

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 62/401 (15%), Positives = 126/401 (31%), Gaps = 50/401 (12%)

Query: 276 FQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           +Q +  + R   K  +Y E+ TP       ++          ++   +  D   K  R  
Sbjct: 20  WQYVEGFAREIFKRYNYAEVRTPIF---EHYEVISRSVGDTTDIVTKEMYDFYDKGDRHI 76

Query: 335 ALKPM-NCPGHVAVFNHGLKSYR-ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
            L+P    P   A   + L +   + P +    G ++R E   +     R+R F Q    
Sbjct: 77  TLRPEGTAPVVRAYVENKLFAPEVQKPSKFYYMGPMFRYERPQA----GRLRQFHQIGVE 132

Query: 393 VFCTKEQM-FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWD--------- 442
            F +       E + +    +      G +  +  L     +     AL D         
Sbjct: 133 CFGSSNPATDVETIVMAAHFLKEIGIQGVKLHLNTLGNPESRAAYRQALIDYLTPLKETL 192

Query: 443 --DAENIMKG----VLDTIKNSSQDR-------INTGVLLGEGAFYGPK-------FEYI 482
             D++  ++     VLD+ +   +         ++      +  F            +YI
Sbjct: 193 SKDSQRRLEENPLRVLDSKEKEDKVAVENAPSILDFLDEESQTHFDAVSQMLENLGVDYI 252

Query: 483 LKDAI--GRDWQCGTIQVDFNLPSRFNAFYVN---SHSEKCHPVMIHRAVFG---SIERF 534
           +   +  G D+   TI          +              +      A FG    +ER 
Sbjct: 253 IDTNMVRGLDYYNHTIFEFITEIEGNDLTVCAGGRYDGLVAYFGGPETAGFGFGLGVERL 312

Query: 535 IGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK 594
           + I+    +G      + +   +  +   A   A E+   L+      E D+ N  +  +
Sbjct: 313 LLIL--EKQGVALPIENALDVYIAVLGDGANVKALELVQALRQQGFKAERDYLNRKLKAQ 370

Query: 595 IREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
            +   +     +I  G+ E   R + ++   +    +VSL 
Sbjct: 371 FKSADVFAAKTLITLGESEVESRQVTVKNNQTREEVQVSLE 411


>gi|332882439|ref|ZP_08450064.1| alanine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str. F0087]
 gi|332679609|gb|EGJ52581.1| alanine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str. F0087]
          Length = 871

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/151 (21%), Positives = 66/151 (43%), Gaps = 10/151 (6%)

Query: 56  EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGF-YYDFDKEQPF 114
           E         D R+ +   H+C H++ +A++++  E     G ++   +  +DF   Q  
Sbjct: 543 EADFMACVDTDLRAASEANHTCTHLLDQALRTVLGEHVEQKGSLVTPEYLRFDFSHFQKV 602

Query: 115 SSDELAQIEKKMQEIIARDSPFL-KQYLSHEKARELFESKKEAYKVEILESIPAKENVTL 173
           + ++L ++E+ +   I  D P    + +  EKA+EL        K          + V +
Sbjct: 603 TDEQLREVERIVNAKIREDLPLQDHRDMPIEKAKELGAIALFGEKY--------GDRVRV 654

Query: 174 YRQGEWFDLCRGPHVRSTGQVKKFFKLMKVA 204
            + G+  + C G H +STG++     L + +
Sbjct: 655 VQFGDSVEFCGGCHAKSTGRIGMMKILSESS 685


>gi|210631790|ref|ZP_03297032.1| hypothetical protein COLSTE_00919 [Collinsella stercoris DSM 13279]
 gi|210159910|gb|EEA90881.1| hypothetical protein COLSTE_00919 [Collinsella stercoris DSM 13279]
          Length = 430

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 61/188 (32%), Gaps = 17/188 (9%)

Query: 272 GWKIFQTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G  + + L ++ +   I   ++E   P ++++ +   +G    +          DD    
Sbjct: 174 GATLDRALQNFFLNTHISRGFKEFIPPVIVNREIMYGTGQLPKF---------EDDAYHT 224

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFT 387
                L P        +    +    +LP+R       +R E   +     G++R   FT
Sbjct: 225 GEDQFLIPTAEVALTNLHAGEVLDAAQLPLRYTAGTPCFREEAGSAGRDTRGIIRQHQFT 284

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +   F   E+   E   +      I +  G    ++ L T              +W  
Sbjct: 285 KVEMVKFARPEESDAELESMVAEAEFILQQLGLPYRVISLCTGDLGFSARQTYDIEVWLP 344

Query: 444 AENIMKGV 451
           + N  K +
Sbjct: 345 SYNAYKEI 352


>gi|167464554|ref|ZP_02329643.1| seryl-tRNA synthetase [Paenibacillus larvae subsp. larvae
           BRL-230010]
          Length = 292

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/223 (15%), Positives = 77/223 (34%), Gaps = 21/223 (9%)

Query: 242 EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEIN 295
           E + H  LA  +D+          GS  +F+   G ++ + L+++M     D   Y EI 
Sbjct: 2   ETKPHWDLAAGLDILDFERAGKVTGSRFVFYKGLGARLERALLNFMMDLHSDEHGYMEIL 61

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
            P ++++     +G    +  ++F +        D   + L P             + + 
Sbjct: 62  PPYLVNRDSLTGTGQLPKFAEDVFRI--------DNSDYFLIPTAEVPVTNYHRDEILTE 113

Query: 356 RELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
            +LP     F + +R+E   +     GL+R   F + +       E  + E   + +   
Sbjct: 114 EQLPGNFVAFSACFRSEAGAAGRDTRGLIRQHQFNKVELVKLVKPEDSYKELEILTSHAE 173

Query: 413 SIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
            + +       ++ L T              +W  +    + +
Sbjct: 174 RVLQLLHLPYRVLTLCTGDLGFSSAKTYDLEVWLPSSGTYREI 216


>gi|153001637|ref|YP_001367318.1| alanyl-tRNA synthetase [Shewanella baltica OS185]
 gi|205830202|sp|A6WR16|SYA_SHEB8 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|151366255|gb|ABS09255.1| alanyl-tRNA synthetase [Shewanella baltica OS185]
          Length = 874

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/141 (19%), Positives = 55/141 (39%), Gaps = 10/141 (7%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSD 117
           IE    +  R    + HS  H++  A++ +        G +++     +DF   +   + 
Sbjct: 546 IEAKVDKKLRHRTQLNHSVTHLLHAALRQVLGTHVSQKGSLVDPERLRFDFSHFEGVKAA 605

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           EL ++E+ +   I R+       +  ++A+E         K            V +   G
Sbjct: 606 ELKEVEELVNTQIRRNHELKTAEMGIDEAKEKGAMALFGEKY--------DSQVRVVTMG 657

Query: 178 EW-FDLCRGPHVRSTGQVKKF 197
           ++  +LC G HV  TG +  F
Sbjct: 658 DFSIELCGGTHVGRTGDIGLF 678


>gi|126695385|ref|YP_001090271.1| alanyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
 gi|205830177|sp|A3PA95|SYA_PROM0 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|126542428|gb|ABO16670.1| Alanyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
          Length = 886

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/190 (20%), Positives = 76/190 (40%), Gaps = 21/190 (11%)

Query: 20  HATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIE--IITP---------EDPR 68
             +G  V   I    +K  V V ++  +   +  +  G+I+  I+T             R
Sbjct: 500 GESGGQVG-DIGTIFSKD-VEVLVDNVMRKKNVFLHHGTIKKGILTIGQKVKTNVSSSNR 557

Query: 69  SLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQ 127
           + A   H+  H++  A++ I  E     G ++  +   +DF+   P S D++++IE  + 
Sbjct: 558 AKAAANHTATHLLQSALKLIVNESVGQKGSLVAFNKLRFDFNSSNPISKDQISKIETLVN 617

Query: 128 EIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPH 187
             I  +     + +S  +A E          V +       E   +   G   +LC G H
Sbjct: 618 SWIMENHALEIKNMSKSEALEKGA-------VAMFGEKYDDEVRVVNVPGVSMELCGGTH 670

Query: 188 VRSTGQVKKF 197
           V++T ++  F
Sbjct: 671 VKTTSELGSF 680


>gi|257784262|ref|YP_003179479.1| alanyl-tRNA synthetase [Atopobium parvulum DSM 20469]
 gi|257472769|gb|ACV50888.1| alanyl-tRNA synthetase [Atopobium parvulum DSM 20469]
          Length = 881

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 65/170 (38%), Gaps = 14/170 (8%)

Query: 44  NGKVCDLSDPVREGSIEI---ITPEDPRSLAVI---RHSCAHIMAEAVQSIWPEVQVAIG 97
           +G +      V EG++ I   +T         +    H+  H++  A++ +  +     G
Sbjct: 527 DGGLESHIGVVEEGTLSIGDSVTATIDAGRRELIRRNHTATHLLDAALKKVLGDHVNQAG 586

Query: 98  P-IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE--LFESKK 154
             +  D   +DF   +  + DEL +IE  +   I    P + + +S E A+         
Sbjct: 587 SLVAPDRMRFDFTHFEALTKDELDRIEGMVNAEIFAAKPIVTKIMSIEDAKAAGAVALFG 646

Query: 155 EAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVA 204
           E Y   +       E+    R+     LC G H R+T  +  F  + + +
Sbjct: 647 EKYGDVVRVVSAGTEDTPFSRE-----LCGGTHARNTADLGLFKIISESS 691


>gi|85859585|ref|YP_461787.1| seryl-tRNA synthetase [Syntrophus aciditrophicus SB]
 gi|85722676|gb|ABC77619.1| seryl-tRNA synthetase [Syntrophus aciditrophicus SB]
          Length = 448

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/246 (13%), Positives = 78/246 (31%), Gaps = 22/246 (8%)

Query: 220 IYGTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWK 274
           + G        +  +          + H ++  ++ +   A      G+    +   G  
Sbjct: 135 VCGVNAEDNPVVRVWGEKPLFDFSPKPHWEIGEDLSILDFARGAKITGARFTLYRGAGAM 194

Query: 275 IFQTLISYMRR--KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           + + +I++M     ++  Y EI  P + ++     +G    +  ++F ++          
Sbjct: 195 LERAIINFMLDLHIMEHGYTEILPPFMANRDSMTGTGQLPKFAEDLFKIENL-------- 246

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQD 389
            + L P        +    +   + LP+    +   +R E         GL+R   F + 
Sbjct: 247 EYYLIPTAEVPVTNIHREEILEEKALPIYYVAYSPCFRAEAGSYGKDTRGLIRQHQFNKV 306

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAE 445
           +   F + E  ++E  K+      + K        V L T               W   +
Sbjct: 307 EMVKFTSPETSYDELEKLTVNAEEVLKRLNIPYRTVSLCTGDLGFSSAKTYDVEAWLPGQ 366

Query: 446 NIMKGV 451
           +  + +
Sbjct: 367 DTYREI 372


>gi|317491441|ref|ZP_07949877.1| seryl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316920988|gb|EFV42311.1| seryl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 430

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 63/188 (33%), Gaps = 10/188 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M     +   Y E   P +++      +G    +  ++F  +  ++   D
Sbjct: 170 ARMHRALAQFMLDLHTEQHGYLETYVPYLVNHDTLYGTGQLPKFGGDLFHTRPLEEEA-D 228

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
             T+AL P        +    +     LP+++      +R+E         GL+R+  F 
Sbjct: 229 SSTYALIPTAEVPVTNLVRGEILEEESLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFD 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E   +   ++      + +        V L T              +W  
Sbjct: 289 KVELVQIVRPEDSMDALEELTGHAEKVLQLLNLPYRKVLLCTGDMGFGSSKTYDLEVWVP 348

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 349 AQNTYREI 356


>gi|255521189|ref|ZP_05388426.1| alanyl-tRNA synthetase [Listeria monocytogenes FSL J1-175]
          Length = 319

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 55/128 (42%), Gaps = 10/128 (7%)

Query: 72  VIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEII 130
           +  H+  H++  A++    E     G ++  D   +DF      + +EL ++E+ + E I
Sbjct: 3   IKNHTATHLLHRALKDTLGEHVNQAGSLVSPDRLRFDFSHFGQITEEELTKMEEIVNEKI 62

Query: 131 ARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVR 189
                 + + +   +A+EL        K          + V + + G++  +LC G HVR
Sbjct: 63  WEQINVVIEEMPIAEAKELGAMALFGEKY--------GDIVRVVQVGKYSIELCGGVHVR 114

Query: 190 STGQVKKF 197
           +T  +  F
Sbjct: 115 NTADIGLF 122


>gi|221060322|ref|XP_002260806.1| glycyl-tRNA synthetase [Plasmodium knowlesi strain H]
 gi|193810880|emb|CAQ42778.1| glycyl-tRNA synthetase, putative [Plasmodium knowlesi strain H]
          Length = 830

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 58/391 (14%), Positives = 127/391 (32%), Gaps = 48/391 (12%)

Query: 278 TLISYM--RRKIKDDYEEI--NTPQVLDQHLWQQSG--HWDSYRANMFAVKCADDTIKDL 331
            +  ++   +K  + Y         +  +     SG      Y     AV       + L
Sbjct: 436 EIEYFVNPEKKCHEKYHLFKHLILPLYPREEQLASGEHSRVVYMEIEEAVTKGIIANEAL 495

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGS-VYRNEPSGSLHGLMRVRGFTQDD 390
             F  +         +   GL+  + LP  +A + +  +  E       ++   GF +  
Sbjct: 496 AYFLARTYLFLLKCGINKDGLRFRQHLPTEMAHYANDCWDAE-------ILTSYGFIEVV 548

Query: 391 AHVFCTKEQMFNECLKIHNLIISIYKDFGFE---------KIMVKLSTRPEKRVGSDALW 441
            H            +K+    +   + +                K+  + + +      W
Sbjct: 549 GHA-DRSAYDLKNHMKVTGANLYACEKYDTPVEEEHIKISPNKAKMGMKFKSQQNVIYQW 607

Query: 442 --DDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVD 499
             +  +  +  + + +   +   +N     G GA   P    + +D I  D     +Q  
Sbjct: 608 LNERTKEELLSIDEELNRKNSYVVNIE---GSGASSTPMSFELTRDMIKFDKYKKKVQER 664

Query: 500 FNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMI------ENFKGNLPLWLSPI 553
             +P           +       I R +F  IE             E    +LP  L+PI
Sbjct: 665 NFIP-----------NVIEPSFGIGRLIFCIIEHSFRTRTFTDDKEERHYLSLPYTLAPI 713

Query: 554 QAIVTTITS--SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
           +  V TI++  + + + +++  +L    +S + D  + +I  K        IP  +    
Sbjct: 714 KCSVLTISNHKTFIPFVKQVQMILNEFSISSKIDNSSVSIGKKYARTDEIGIPFAVTIDF 773

Query: 612 KEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           +   ++++ +R   S    ++ L D + I+T
Sbjct: 774 QTLKDKTVTLRERDSMLQVRIDLSDLVEIVT 804



 Score = 39.8 bits (91), Expect = 1.5,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 4/78 (5%)

Query: 336 LKPMNCPGHVAVFNHGLKSYR--ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
           L+P    G    F   L  Y   ++P   A+ G  +RNE S   +GL+RVR F   +   
Sbjct: 382 LRPETAQGIFVNFK-KLLEYNGGKMPFAGAQIGLGFRNEISPR-NGLLRVREFEMAEIEY 439

Query: 394 FCTKEQMFNECLKIHNLI 411
           F   E+  +E   +   +
Sbjct: 440 FVNPEKKCHEKYHLFKHL 457


>gi|228999191|ref|ZP_04158772.1| Histidyl-tRNA synthetase 2 [Bacillus mycoides Rock3-17]
 gi|229006738|ref|ZP_04164372.1| Histidyl-tRNA synthetase 2 [Bacillus mycoides Rock1-4]
 gi|228754599|gb|EEM04010.1| Histidyl-tRNA synthetase 2 [Bacillus mycoides Rock1-4]
 gi|228760536|gb|EEM09501.1| Histidyl-tRNA synthetase 2 [Bacillus mycoides Rock3-17]
          Length = 423

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 69/422 (16%), Positives = 135/422 (31%), Gaps = 73/422 (17%)

Query: 275 IFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           ++Q +    R   +  +Y+EI TP        +          ++   +      +  R+
Sbjct: 19  LWQYIEGQAREICRRYNYKEIRTPIF---EHTELFLRGVGDTTDIVQKEMYSFQDRGERS 75

Query: 334 FALKPM-NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
             L+P    P   +   + +      P +L   G ++R E   +     R R F Q    
Sbjct: 76  LTLRPEGTAPVVRSYVENKMYGDATQPTKLYYIGQMFRYERPQA----GRYRQFVQFGIE 131

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFG----------------FEKIMVKLSTRPEKRVG 436
              + +   +   ++  L +  Y+  G                 +     L    E R+G
Sbjct: 132 AIGSNDPAIDA--EVIALAVEFYRGMGLKNIKVVLNSLGDAASRQAHREALIAHFEPRIG 189

Query: 437 ---SDALWDDAENIMKGVLDTIKNSSQD------RINTGVLLGEGAFY----------GP 477
              SD      +N ++ +LD  K+ + +       I   +      +Y          G 
Sbjct: 190 EFCSDCQSRLEKNPLR-ILDCKKDRNHELMSTAPSITEYLNEESTTYYEKVQELLTMMGV 248

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS--------EKCHPVMIHRAVFG 529
            FE       G D+   T+    +    F A    S          E   P M       
Sbjct: 249 PFEKDPNLVRGLDYYQHTVFEIMSEADGFGAITTLSGGGRYNGLVQEIGGPEMPGIGFAM 308

Query: 530 SIERFIGIM--------IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLS 581
           SIER I  +        IE+               V  +   A ++A +IA  L+   LS
Sbjct: 309 SIERLIMALKAENIELPIEHNID----------CYVVALGDKAKDHAAKIAFDLRKAGLS 358

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           +E D+ +  +  + +         + + G+ E  +  I ++   +   ++V+L      +
Sbjct: 359 VEKDYLDRKMKAQFKSADRLNAKYVAVLGEDELDKGIINLKDMATGGQEEVALDVFASYV 418

Query: 642 TK 643
            +
Sbjct: 419 AE 420


>gi|83319858|ref|YP_424781.1| seryl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum ATCC
           27343]
 gi|123535469|sp|Q2SR32|SYS_MYCCT RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|83283744|gb|ABC01676.1| seryl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum ATCC
           27343]
          Length = 422

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/234 (14%), Positives = 85/234 (36%), Gaps = 22/234 (9%)

Query: 220 IYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKI 275
            +G +     E+ +  +         H ++A ++ L    +     G+  + +   G K+
Sbjct: 117 YFGKSDEDNVEIRKSNHSNLLKHSTPHWQIATKLGLVDFEKGVKLSGTRFLIYTGLGSKL 176

Query: 276 FQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
            +++   + +R  K  Y+EI  P ++++     +G    +  +M+ V            +
Sbjct: 177 VRSIADLLLKRHEKHGYKEIFCPLIVNKSAMLGTGQLPKFSEDMYQV---------GEQY 227

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDA 391
            + P +      +  + + +Y  LP++   F   +R E   +     G++R+  F + + 
Sbjct: 228 LI-PTSEVPLTNLHANEILAYDVLPLKYTSFTQCFRQEAGSAGRDTKGMIRLHQFNKVEL 286

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALW 441
                 E+  NE   +      +   F     +V+L +              +W
Sbjct: 287 VKIVHPEESMNELEMLIKDAEDVLNMFDLPYRVVELCSGDIGFSSAKTYDLEVW 340


>gi|297616546|ref|YP_003701705.1| alanyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
 gi|297144383|gb|ADI01140.1| alanyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
          Length = 877

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 61/164 (37%), Gaps = 16/164 (9%)

Query: 41  VAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII 100
             + G +       +   ++    E  R      H+  H++  A++ +  E     G ++
Sbjct: 538 GRVQGILV------KNEEVQAEVDEQRRLATARNHTATHLLHRALRMVVGEHAQQKGSLV 591

Query: 101 EDG-FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKV 159
           E     +DF    P + +E+  IE  +   I           + E+A++         K 
Sbjct: 592 EPERLRFDFSHFAPLTEEEIQAIEDIVNRKIWDLEKVEVDLATLEEAKQKGAMALFGEKY 651

Query: 160 EILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKFFKLMK 202
                    + V +   G++  +LC G HV +TGQ+  F  + +
Sbjct: 652 --------GDEVRVISIGDFSIELCGGTHVENTGQIGLFKIINE 687


>gi|269102238|ref|ZP_06154935.1| seryl-tRNA synthetase [Photobacterium damselae subsp. damselae CIP
           102761]
 gi|268162136|gb|EEZ40632.1| seryl-tRNA synthetase [Photobacterium damselae subsp. damselae CIP
           102761]
          Length = 436

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 41/246 (16%), Positives = 85/246 (34%), Gaps = 16/246 (6%)

Query: 222 GTAWNTQQELTQYLY-FLEESEKRDHRKLAREMDL--FHIAEDGSGVIFWHRKG--WKIF 276
           G   N   E++++      + E +DH  L    D   F  A   +G  F   KG   ++ 
Sbjct: 116 GKDENDNVEISRWGEPKTYDFEVKDHVDLGEMSDGLDFASAVKITGARFIVMKGQFARLH 175

Query: 277 QTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL--R 332
           + +  +M     +   Y E+  P +++      +G    + A++F  +   + + D   R
Sbjct: 176 RAIAQFMLDLHIEEHGYTEMYVPYLVNADSLFGTGQLPKFGADLFHTQPLTEKVNDEEPR 235

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQD 389
           T +L P        +    +    +LPV++      +R+E         GL+R+  F + 
Sbjct: 236 TLSLIPTAEVPVTNLMRDTISEEADLPVKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKV 295

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAE 445
           +       E       ++      + +        V L T              +W  A+
Sbjct: 296 ELVQITKPEDSMAALEELTGHAEKVLQLLELPYRKVVLCTGDMGFGSCKTYDLEVWVPAQ 355

Query: 446 NIMKGV 451
              + +
Sbjct: 356 ETYREI 361


>gi|15644148|ref|NP_229197.1| alanyl-tRNA synthetase [Thermotoga maritima MSB8]
 gi|6707752|sp|Q9X1B6|SYA_THEMA RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|4981959|gb|AAD36467.1|AE001792_7 alanyl-tRNA synthetase [Thermotoga maritima MSB8]
          Length = 863

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/150 (24%), Positives = 64/150 (42%), Gaps = 9/150 (6%)

Query: 50  LSDPVREGSIEIITPEDPRSLAVIR-HSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYD 107
           L   +R G   I+  +  R  A +R H+  H++  A++ +  +     G  +  D   +D
Sbjct: 535 LDGTLRRGQKVILRVDKKRREATMRNHTATHLLHAALKKVLGDHVRQAGSLVAPDRLRFD 594

Query: 108 FDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPA 167
           F   +  SS E+ Q+E  + E I    P   +Y S+E+A +          V +      
Sbjct: 595 FTHFKGLSSAEIEQVEDLVNEWIMEAIPVEVRYTSYEEAVKSGV-------VALFTEKYG 647

Query: 168 KENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
                +   G   +LC G HV++TGQ+  F
Sbjct: 648 DVVRVVEVPGVSKELCGGTHVKNTGQIGLF 677


>gi|283856488|ref|YP_163243.2| histidyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4]
 gi|283775492|gb|AAV90132.2| histidyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 419

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 56/330 (16%), Positives = 103/330 (31%), Gaps = 61/330 (18%)

Query: 359 PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           P ++A  G V+R E         R R F Q DA V    E   +   ++ +L   + +  
Sbjct: 103 PCKIATHGPVFRYERPQK----GRYRQFHQIDAEVIGAAEPEADV--ELLSLADQLLESL 156

Query: 419 GFEKIMVKLSTRPEKRVGSDALWDDA-----------------ENIMKGVL--------- 452
           G  K  V L         S   W  A                 E + +  L         
Sbjct: 157 G-IKQHVTLHLNTLGDSASREAWRAALIEYFQGHFDSLSQESQERLTRNPLRILDSKDPN 215

Query: 453 DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
           D I       I+  +     +F+  K      DA G  W      V      R  AF   
Sbjct: 216 DKIIAEKAPIIDDYLTEEAASFF--KAVTTGLDAAGVAWTRDPRLVRGLDYYRHTAFEFI 273

Query: 513 SHSEKCHPVMIHRAVF------------------GSIERFIGIMIENFKGNLPLWLSPIQ 554
           +        ++    +                    IER + ++I+  K +         
Sbjct: 274 TDQLGAQGTVLAGGRYDGLSEALGGNLTPAIGWAAGIER-LAMLIDEPKEDAMN------ 326

Query: 555 AIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
             V  +   A   A  I + L+   +S +  +R   +  ++++ +   +   +I G++E 
Sbjct: 327 VAVIPLGEEAKNPAISILSKLRHAGISADMSWRGN-MKRRMQKANGWGVRYAVILGEEEL 385

Query: 615 SERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           +     +R   +   Q ++L   +  +  E
Sbjct: 386 ARNEATVRSMVTGEQQAIALDQIVDRILSE 415


>gi|146296476|ref|YP_001180247.1| seryl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
 gi|166201242|sp|A4XJH1|SYS_CALS8 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|145410052|gb|ABP67056.1| seryl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
          Length = 420

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/290 (13%), Positives = 95/290 (32%), Gaps = 23/290 (7%)

Query: 147 RELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMK---- 202
            +  +   E  K++ +++  +KE   L ++G+            + ++K+    +K    
Sbjct: 35  EKRRKLLAEVEKMKAIQNQKSKEIPKLKKEGKDTTELMNELKELSDKIKELDSQVKEVED 94

Query: 203 -VAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAE- 260
            +        +       I        +        + + E + H ++  ++ +      
Sbjct: 95  EIEKILLTIPNIPHESVPIGKDDTENVEVRRWGEPRVPDFEIKPHWEIGEKLGILDFERA 154

Query: 261 ---DGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYR 315
               GS   F+   G ++ + LI++M     +   Y E+  P ++ +     +G    + 
Sbjct: 155 SKVSGSRFTFYRGLGARLERALINFMLDLHIEKHGYVELFPPFLVARKSMIGTGQLPKFE 214

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE--- 372
            + F              + L P             +    +LP++   + + +R E   
Sbjct: 215 EDAFKTTD---------DYFLIPTAEVPVTNYHREEILKEEDLPIKYVAYSACFRAEAGA 265

Query: 373 PSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEK 422
                 GL+R   F + +   F   E  ++E  K+      + K  G   
Sbjct: 266 AGKDTRGLIRQHQFNKVELVKFAKPEDSYDELEKLTADAEDVLKHLGLPY 315


>gi|16800623|ref|NP_470891.1| histidyl-tRNA synthetase [Listeria innocua Clip11262]
 gi|32130133|sp|Q92BJ3|SYH_LISIN RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|16414042|emb|CAC96786.1| histidyl-tRNA synthetase [Listeria innocua Clip11262]
          Length = 425

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 68/431 (15%), Positives = 134/431 (31%), Gaps = 63/431 (14%)

Query: 265 VIFWHRKGWK--------IFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
           +     +G +         +  L S   +  ++  YEEI TP        +         
Sbjct: 1   MDLQLPRGTRDILPEEVSKWHFLESAFNKVCENYQYEEIRTPIF---EHTELFERGVGDS 57

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF-NHGLKSYRELPVRLAEFGSVYRNEPS 374
            ++ + +      K  R+  L+P      V  F  H L      P+++     ++R E  
Sbjct: 58  TDIVSKEMYTFLDKGGRSLTLRPEGTASVVRAFVEHKLYGEVSQPIKMYYNEPMFRYERP 117

Query: 375 GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM---------- 424
                  R R FTQ       + +   +   ++ +L +  ++  G   I           
Sbjct: 118 ----QGGRQRQFTQMGIEALGSDDPSIDV--EVISLAMEFFRKIGLTNIKLVINSLGDKE 171

Query: 425 ----VKLSTRPEKRVGSDALWDDAENIMK------GVLDTIKN------SSQDRINTGVL 468
                + +         D     AE  ++       +LD  K+       S   I   + 
Sbjct: 172 SRLKHREALVAHFEPHIDEF--CAECQVRLHKNPLRILDCKKDHDNPLIQSAPSILDFLN 229

Query: 469 LGEGAF------YGPKFEYILKD----AIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKC 518
               A+      Y    E   +       G D+   T     ++   F A        + 
Sbjct: 230 EESVAYFENVKKYLTALEIPFEIDPTMVRGLDYYNHTTFEIMSVEEGFGAKTTLCGGGRY 289

Query: 519 HPVMIHRAVFGSIERFIGIMIE------NFKGNLPLWLSPIQAIVTTITSSAVEYAQEIA 572
           H ++       +     GI +E                 P++  V T    A   A  + 
Sbjct: 290 HGLVKEFGGPDTPGIGFGIGVERILLALEKAEINIPETKPLEVYVITAQPEAELKAVTLV 349

Query: 573 NLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKV 632
           N L+ + +S E D+    +  ++++ + KK    +I G++E    +  ++   +   + V
Sbjct: 350 NKLRQNGISAEKDYLKRKLKAQLKDANRKKAIYTVILGEEELQTGNYQLKNMETGEQEAV 409

Query: 633 SLLDAIPILTK 643
           S    I  LT 
Sbjct: 410 SETTIIEKLTN 420


>gi|330998231|ref|ZP_08322057.1| alanine--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
 gi|329568923|gb|EGG50721.1| alanine--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
          Length = 871

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/151 (21%), Positives = 66/151 (43%), Gaps = 10/151 (6%)

Query: 56  EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGF-YYDFDKEQPF 114
           E         D R+ +   H+C H++ +A++++  E     G ++   +  +DF   Q  
Sbjct: 543 EADFMACVDTDLRAASEANHTCTHLLDQALRTVLGEHVEQKGSLVTPEYLRFDFSHFQKV 602

Query: 115 SSDELAQIEKKMQEIIARDSPFL-KQYLSHEKARELFESKKEAYKVEILESIPAKENVTL 173
           + ++L ++E+ +   I  D P    + +  EKA+EL        K          + V +
Sbjct: 603 TDEQLREVERIVNAKIREDLPLQDHRDMPIEKAKELGAIALFGEKY--------GDRVRV 654

Query: 174 YRQGEWFDLCRGPHVRSTGQVKKFFKLMKVA 204
            + G+  + C G H +STG++     L + +
Sbjct: 655 VQFGDSVEFCGGCHAKSTGRIGMVKILSESS 685


>gi|323704147|ref|ZP_08115726.1| histidyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum
           LX-11]
 gi|323536213|gb|EGB25985.1| histidyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum
           LX-11]
          Length = 417

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 61/420 (14%), Positives = 131/420 (31%), Gaps = 60/420 (14%)

Query: 269 HRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
                  +Q L + +R    D  ++EI TP        +          ++   +     
Sbjct: 13  LPSEAYKWQYLENMIREICADFGFKEIRTPGF---EHTELFLRGVGESTDIVRKEMYTFN 69

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
            K  R+  LKP      V  F         +PV++     VYR E   S     R+R   
Sbjct: 70  DKSGRSITLKPEGTSPAVRAFVEHNLYAETMPVKIYYITPVYRYERPQS----GRLREHH 125

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGF------------EKIMVKLSTRPEKRV 435
           Q    +F + + + +   ++ ++ ++++   G                  + +   ++ +
Sbjct: 126 QFGIEMFGSNDALADA--EVISVAMTLFNKLGLKNLELNINSIGCPNCRREYNKALKEFL 183

Query: 436 GS---------------------DALWDDAENIMKGV---LDTIKNSSQDRINT--GVLL 469
           G                      D   +  + I+K     L+ + +  ++   +    L 
Sbjct: 184 GENIENLCDDCKERYKINPMRVLDCKVESCKRILKDAPLMLNYLCDDCKNHFESLQSYLK 243

Query: 470 GEGAFY--GPKF----EYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMI 523
             G  +   PK     +Y  K A          Q       R++             V  
Sbjct: 244 EAGFNFIINPKIVRGLDYYTKTAFEIISNDIGAQGTVCGGGRYDGLVEECGGPSVPGVGF 303

Query: 524 HRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIE 583
              +   +       IE      P         + TI + A +YA  +A  L+S  +S+E
Sbjct: 304 GLGLERLLLTLENSGIEIPAPKRPD------LFICTIGNEAKKYAFSMATKLRSLGISVE 357

Query: 584 TDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            D    ++  +++  +   +   II G+ E     + ++   +     + L      +++
Sbjct: 358 IDNMGRSLKAQMKYANKLNVRYTIILGEDELKNGKVKMKNMDTGEESAIELDKIYDKISE 417


>gi|228993141|ref|ZP_04153063.1| Histidyl-tRNA synthetase 2 [Bacillus pseudomycoides DSM 12442]
 gi|228766600|gb|EEM15241.1| Histidyl-tRNA synthetase 2 [Bacillus pseudomycoides DSM 12442]
          Length = 423

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 69/422 (16%), Positives = 134/422 (31%), Gaps = 73/422 (17%)

Query: 275 IFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           ++Q +    R   +  +Y+EI TP        +          ++   +      +  R+
Sbjct: 19  LWQYIEGQAREICRRYNYKEIRTPIF---EHTELFLRGVGDTTDIVQKEMYSFQDRGERS 75

Query: 334 FALKPM-NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
             L+P    P   +   + +      P +L   G ++R E   +     R R F Q    
Sbjct: 76  LTLRPEGTAPVVRSYVENKMYGDATQPTKLYYIGQMFRYERPQA----GRYRQFVQFGIE 131

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFG----------------FEKIMVKLSTRPEKRVG 436
              + +   +   ++  L +  Y+  G                 +     L    E R+G
Sbjct: 132 AIGSNDPAIDA--EVIALAVEFYRGMGLKNIKVVLNSLGDAASRQAHREALIAHFEPRIG 189

Query: 437 ---SDALWDDAENIMKGVLDTIKNSSQD------RINTGVLLGEGAFY----------GP 477
              SD      +N ++ +LD  K+   +       I   +      +Y          G 
Sbjct: 190 EFCSDCQSRLEKNPLR-ILDCKKDRDHELMSTAPSITEYLNEESTTYYEKVQELLTMMGV 248

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHS--------EKCHPVMIHRAVFG 529
            FE       G D+   T+    +    F A    S          E   P M       
Sbjct: 249 PFEKDPNLVRGLDYYQHTVFEIMSEADGFGAITTLSGGGRYNGLVQEIGGPEMPGIGFAM 308

Query: 530 SIERFIGIM--------IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLS 581
           SIER I  +        IE+               V  +   A ++A +IA  L+   LS
Sbjct: 309 SIERLIMALKAENIELPIEHNID----------CYVVALGDKAKDHAAKIAFDLRKAGLS 358

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPIL 641
           +E D+ +  +  + +         + + G+ E  +  I ++   +   ++V+L      +
Sbjct: 359 VEKDYLDRKMKAQFKSADRLNAKYVAVLGEDELDKGIINLKDMATGGQEEVALDVFASYV 418

Query: 642 TK 643
            +
Sbjct: 419 AE 420


>gi|20806566|ref|NP_621737.1| seryl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
 gi|254478338|ref|ZP_05091717.1| seryl-tRNA synthetase [Carboxydibrachium pacificum DSM 12653]
 gi|30173181|sp|Q8RDJ5|SYS_THETN RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|20515006|gb|AAM23341.1| Seryl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
 gi|214035696|gb|EEB76391.1| seryl-tRNA synthetase [Carboxydibrachium pacificum DSM 12653]
          Length = 425

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/234 (14%), Positives = 83/234 (35%), Gaps = 22/234 (9%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHI----AEDGSGVIFWHRKGWKIF 276
           G +     E+ ++    +   E + H ++   + +          GS  +F+   G ++ 
Sbjct: 114 GESDEDNVEVRRWGEPRKFDFEPKPHWEIGEALGILDFEAASRVTGSRFVFYKGLGARLE 173

Query: 277 QTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           + LI++M     +   Y+E+  P ++ +     +G    +  + F V        +   +
Sbjct: 174 RALINFMLDLHIEKHGYKEVFPPFLVHRRSMFGTGQLPKFEEDAFKV--------EGTDY 225

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDA 391
            L P        ++   +    +LP+    + + +R E   +     GL+R   F + + 
Sbjct: 226 FLIPTAEVPVTNLYRETIIDGEQLPIYHCAYSACFRQEAGAAGRDTRGLIRQHQFDKVEL 285

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALW 441
             F   ++ + E  K+      + +  G    +V + T              +W
Sbjct: 286 VKFTEPDKSYEELEKMTRDAEEVLQALGLPYRVVAICTGDLGFTASKKYDIEVW 339


>gi|298373550|ref|ZP_06983539.1| histidine--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058]
 gi|298274602|gb|EFI16154.1| histidine--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058]
          Length = 453

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 40/92 (43%)

Query: 551 SPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICG 610
           +  Q +         +Y+  I   ++   ++ E    N  I  +++  + K+IP + I G
Sbjct: 361 AATQILFAVFDEEGRKYSLPIVRSIRRKGIAAELYPDNAKIKKQMQYANDKRIPFVAIVG 420

Query: 611 DKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           D+E    S+ ++   +   + VS+ + +  + 
Sbjct: 421 DEEIKSHSVMLKNMETGEQKLVSIDNIVQEIR 452



 Score = 43.2 bits (100), Expect = 0.15,   Method: Composition-based stats.
 Identities = 32/224 (14%), Positives = 70/224 (31%), Gaps = 30/224 (13%)

Query: 270 RKGWKIFQTLI----SYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRAN-------- 317
            KG + F  +     +Y+   I++ + +    Q+    +   S     Y           
Sbjct: 7   PKGTRDFLPVEMERRNYIFDTIREAFRKFGFLQIETPAMENISTLLGKYGDEGDKLLFRI 66

Query: 318 ------MFAVKCADDTIKDLRTFALKPMNCPGHVAV---FNHGLKSYRE---LPVRLAEF 365
                 +  V  A+  + ++R   LK         +   F   +  +R+    P R  + 
Sbjct: 67  LNSGNFLDGVSTAEQDVSNVRELTLKIAEKGLRYDLTVPFARFVVQHRDAITFPFRRYQI 126

Query: 366 GSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV 425
             V+R +         R R F Q DA +  +        +++  LI  ++   G    + 
Sbjct: 127 QPVWRADRPQR----GRYREFYQCDADIVGSD--SLLNEVELIELIDDVFGRLGINVSIK 180

Query: 426 KLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDRINTGVLL 469
             + +    +       D    +   +D +     D +N  +  
Sbjct: 181 INNRKILAGIAELIGEADKITDITVAIDKLDKIGLDNVNKELEE 224


>gi|329850424|ref|ZP_08265269.1| seryl-tRNA synthetase [Asticcacaulis biprosthecum C19]
 gi|328840739|gb|EGF90310.1| seryl-tRNA synthetase [Asticcacaulis biprosthecum C19]
          Length = 427

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/224 (17%), Positives = 76/224 (33%), Gaps = 24/224 (10%)

Query: 242 EKRDHRKLAREMDLFHI---AEDGSGVIFWHRKG--WKIFQTLISYMRRKIKD--DYEEI 294
             +DH  L   M +      A+       +  KG   ++ + +  +M     +   Y E+
Sbjct: 140 TPKDHADLGEAMKMMDFEAAAKISGSRFVFL-KGQLARLERAIGQFMLDVQTNEHGYTEV 198

Query: 295 NTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
           N P ++  H    +G    +  ++F         K    F L P        +    + +
Sbjct: 199 NPPVLVKDHAMFGTGQLPKFEEDLF---------KTAEPFYLIPTAEVSLTNLIREAITA 249

Query: 355 YRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI 411
             ELP+RL    + +R E   +     G++R   F + +     T EQ   E  ++    
Sbjct: 250 EEELPLRLTALTNCFRAEAGSAGRDTKGMIRQHQFQKVELVSITTPEQSSEEHERMTGCA 309

Query: 412 ISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
            SI K        + L T              +W  ++N  + +
Sbjct: 310 ESILKRLELPYRTMLLCTGDMGFGARKTYDLEVWLPSQNTYREI 353


>gi|302674551|ref|XP_003026960.1| hypothetical protein SCHCODRAFT_79562 [Schizophyllum commune H4-8]
 gi|300100645|gb|EFI92057.1| hypothetical protein SCHCODRAFT_79562 [Schizophyllum commune H4-8]
          Length = 660

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 12/100 (12%), Positives = 36/100 (36%), Gaps = 2/100 (2%)

Query: 546 LPLWLSPIQAIVTTIT--SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           LP  ++P + ++  ++          E++   +   +    D  N +I  +   +     
Sbjct: 536 LPPLVAPTKVLIVPLSAKEEFDPLVAEVSAKFRKAGIFSRVDDSNASIGKRYARNDELGT 595

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           P  +        +R++ +R   +   +  S+ + I  +  
Sbjct: 596 PYGVTLDFASVQKRTMTLRERDTMDQRIGSIDEVIATVAD 635



 Score = 40.5 bits (93), Expect = 0.94,   Method: Composition-based stats.
 Identities = 23/89 (25%), Positives = 35/89 (39%), Gaps = 2/89 (2%)

Query: 335 ALKPMNCPGHVAVFNHGLKSYR-ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
            L+P    GH   F+  L+     +P   A+ G  +RNE S    GL+RVR FT  +   
Sbjct: 218 YLRPETAQGHFLNFSRLLEFNNGRVPFASAQVGRSFRNEISPR-AGLLRVREFTMAEIEH 276

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGFEK 422
           +   E   +           +  D G + 
Sbjct: 277 YVDPEDKSHPRFAEVRDTRMVLLDRGTQA 305


>gi|298369230|ref|ZP_06980548.1| serine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
 gi|298283233|gb|EFI24720.1| serine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
          Length = 431

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/222 (17%), Positives = 76/222 (34%), Gaps = 14/222 (6%)

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHR-KG--WKIFQTLISYMRRK--IKDDYEEINT 296
           E +DH  L   + L            +   KG   ++ + L  +M     +K  Y E  T
Sbjct: 137 EIKDHVDLGEPLGLDFEGGAKLSGARFTVMKGQIARLHRALAQFMLDTHTLKHGYTEHYT 196

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P ++D    Q +G    +  ++F V    D  K  +     P             + +  
Sbjct: 197 PYIVDDTTLQGTGQLPKFAEDLFHVTRGGDESKKTQYLI--PTAEVTLTNTVADSIVAGS 254

Query: 357 ELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           +LP++L      +R+E       + GL+R   F + +       E+ +    ++     +
Sbjct: 255 DLPLKLTAHSPCFRSEAGAYGKDVRGLIRQHQFDKVEMVQIVHPEKSYEALEEMVGHAEN 314

Query: 414 IYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
           I K       ++ L T              +W  A+N  + +
Sbjct: 315 ILKALELPYRVITLCTGDMGFGATKTYDLEVWVPAQNTYREI 356


>gi|291280329|ref|YP_003497164.1| seryl-tRNA synthetase [Deferribacter desulfuricans SSM1]
 gi|290755031|dbj|BAI81408.1| seryl-tRNA synthetase [Deferribacter desulfuricans SSM1]
          Length = 425

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/178 (15%), Positives = 62/178 (34%), Gaps = 16/178 (8%)

Query: 272 GWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G K+ + LI++M   + ++ Y+EI  P ++++     +G    +   +F          +
Sbjct: 170 GAKLERALINFMLDVQSENGYQEIIPPFLVNEKTMTGTGQLPKFEEELFKC--------E 221

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFT 387
                L P        ++   + S  +LP+ +  +   +R E       + GL+R   F 
Sbjct: 222 RDNLYLIPTAEVPVTNIYADEILSEDDLPLYMTAYTPCFRREAGSHGKDVRGLIRQHQFN 281

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALW 441
           + +       E    E  K+      I +       ++ L +              +W
Sbjct: 282 KVELVKIVKPEDSDEELEKLLLDAEKILQLLEIPYRVMTLCSGDLGFSAAKTYDIEVW 339


>gi|224534195|ref|ZP_03674773.1| alanine--tRNA ligase [Borrelia spielmanii A14S]
 gi|224514297|gb|EEF84613.1| alanine--tRNA ligase [Borrelia spielmanii A14S]
          Length = 594

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 55/130 (42%), Gaps = 10/130 (7%)

Query: 75  HSCAHIMAEAVQSIWPEVQVAIGPII-EDGFYYDFDKEQPFSSDELAQIEKKMQEIIARD 133
           H+  H++ +A+Q +  +     G  I  +   +DF   +  + DE+ ++E+ +   I   
Sbjct: 456 HTATHLLHKALQLVLGDHVKQKGSNITAERLRFDFVHSKKMTDDEIKRVEEIVNLQIKNS 515

Query: 134 SPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTG 192
               K  +   +ARE         K + L        V++Y    +  ++C GPHV +T 
Sbjct: 516 LSVKKSIMELSEAREKGAMALFGEKYDNL--------VSVYEIDGFSLEVCGGPHVENTN 567

Query: 193 QVKKFFKLMK 202
           ++  F    +
Sbjct: 568 ELGTFKIQKE 577


>gi|326381098|ref|NP_001191908.1| seryl-tRNA synthetase, cytoplasmic isoform 2 [Mus musculus]
 gi|18266844|sp|P26638|SYSC_MOUSE RecName: Full=Seryl-tRNA synthetase, cytoplasmic; AltName:
           Full=Serine--tRNA ligase; Short=SerRS; AltName:
           Full=Seryl-tRNA(Ser/Sec) synthetase
 gi|14250361|gb|AAH08612.1| Sars protein [Mus musculus]
 gi|26344682|dbj|BAC35990.1| unnamed protein product [Mus musculus]
 gi|123220015|emb|CAM22589.1| seryl-aminoacyl-tRNA synthetase [Mus musculus]
          Length = 512

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/159 (16%), Positives = 54/159 (33%), Gaps = 9/159 (5%)

Query: 275 IFQTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           + Q LI Y +R      Y  I TP  + + + Q+      +   ++ V        D  +
Sbjct: 203 LEQALIQYALRTLGSRGYTPIYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGSEKSDDNS 262

Query: 334 FALKP---MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFT 387
           +  K     +     A+         +LP++ A   + +R E         G+ RV  F 
Sbjct: 263 YDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGRDTRGIFRVHQFE 322

Query: 388 QDDAHVFCTKEQ--MFNECLKIHNLIISIYKDFGFEKIM 424
           + +  V+ +      +    ++       Y+  G    +
Sbjct: 323 KIEQFVYSSPHDNKSWEMFDEMIATAEEFYQSLGIPYHI 361


>gi|21242403|ref|NP_641985.1| seryl-tRNA synthetase [Xanthomonas axonopodis pv. citri str. 306]
 gi|30173178|sp|Q8PLY2|SYS_XANAC RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|21107843|gb|AAM36521.1| seryl-tRNA synthetase [Xanthomonas axonopodis pv. citri str. 306]
          Length = 426

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 64/188 (34%), Gaps = 15/188 (7%)

Query: 273 WKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M      +  YEE N P +++    + +G    +  ++F  +       +
Sbjct: 171 ARLHRALAQFMLDLHVGEHGYEETNVPLLVNADSMRGTGQLPKFEDDLFQTEV-----GE 225

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
            R + + P +      +    +     LP+R+      +R E         G++R   F 
Sbjct: 226 SRRYLI-PTSEVPLTNIVREEIVDAERLPLRMTAHSMCFRAEAGSGGRDTRGMIRQHQFE 284

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +    C  E    E  ++      + +  G     V L T              +W  
Sbjct: 285 KVELVTACAPEDSDAEHQRMTRCAEVVLEQLGLPYRKVLLCTGDMGFSAIKTYDLEVWLP 344

Query: 444 AENIMKGV 451
           ++N  + +
Sbjct: 345 SQNTYREI 352


>gi|304410155|ref|ZP_07391774.1| alanyl-tRNA synthetase [Shewanella baltica OS183]
 gi|307302134|ref|ZP_07581892.1| alanyl-tRNA synthetase [Shewanella baltica BA175]
 gi|304351564|gb|EFM15963.1| alanyl-tRNA synthetase [Shewanella baltica OS183]
 gi|306914172|gb|EFN44593.1| alanyl-tRNA synthetase [Shewanella baltica BA175]
          Length = 874

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 55/141 (39%), Gaps = 10/141 (7%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSD 117
           +E    +  R    + HS  H++  A++ +        G +++     +DF   +   + 
Sbjct: 546 VEAKVDKKLRHRTQLNHSVTHLLHAALRQVLGTHVSQKGSLVDPERLRFDFSHFEGVKAA 605

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           EL ++E+ +   I R+       +  ++A+E         K            V +   G
Sbjct: 606 ELKEVEELVNTQIRRNHELKTAEMGIDEAKEKGAMALFGEKY--------DSQVRVVTMG 657

Query: 178 EW-FDLCRGPHVRSTGQVKKF 197
           ++  +LC G HV  TG +  F
Sbjct: 658 DFSIELCGGTHVGRTGDIGLF 678


>gi|217972432|ref|YP_002357183.1| alanyl-tRNA synthetase [Shewanella baltica OS223]
 gi|217497567|gb|ACK45760.1| alanyl-tRNA synthetase [Shewanella baltica OS223]
          Length = 874

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 55/141 (39%), Gaps = 10/141 (7%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSD 117
           +E    +  R    + HS  H++  A++ +        G +++     +DF   +   + 
Sbjct: 546 VEAKVDKKLRHRTQLNHSVTHLLHAALRQVLGTHVSQKGSLVDPERLRFDFSHFEGVKAA 605

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           EL ++E+ +   I R+       +  ++A+E         K            V +   G
Sbjct: 606 ELKEVEELVNTQIRRNHELKTAEMGIDEAKEKGAMALFGEKY--------DSQVRVVTMG 657

Query: 178 EW-FDLCRGPHVRSTGQVKKF 197
           ++  +LC G HV  TG +  F
Sbjct: 658 DFSIELCGGTHVGRTGDIGLF 678


>gi|126175316|ref|YP_001051465.1| alanyl-tRNA synthetase [Shewanella baltica OS155]
 gi|205830201|sp|A3D783|SYA_SHEB5 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|125998521|gb|ABN62596.1| alanyl-tRNA synthetase [Shewanella baltica OS155]
          Length = 874

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 55/141 (39%), Gaps = 10/141 (7%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSD 117
           +E    +  R    + HS  H++  A++ +        G +++     +DF   +   + 
Sbjct: 546 VEAKVDKKLRHRTQLNHSVTHLLHAALRQVLGTHVSQKGSLVDPERLRFDFSHFEGVKAA 605

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           EL ++E+ +   I R+       +  ++A+E         K            V +   G
Sbjct: 606 ELKEVEELVNTQIRRNHELKTAEMGIDEAKEKGAMALFGEKY--------DSQVRVVTMG 657

Query: 178 EW-FDLCRGPHVRSTGQVKKF 197
           ++  +LC G HV  TG +  F
Sbjct: 658 DFSIELCGGTHVGRTGDIGLF 678


>gi|302379863|ref|ZP_07268346.1| serine--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
 gi|302312341|gb|EFK94339.1| serine--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
          Length = 421

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 55/335 (16%), Positives = 114/335 (34%), Gaps = 29/335 (8%)

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
           +  +    + P  K   + EK RE+ +   E+ K E  ++  +K+   + + GE      
Sbjct: 16  EALKKRRGEYPIQKLLATDEKRREVIQKV-ESMKAE--QNKLSKQVPQMKKNGEDTTELF 72

Query: 185 GPHVRSTGQVKKFFKLMKVA----GAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
               + +  +K     +K        Y     N P      G       E+ ++    + 
Sbjct: 73  KNLKKLSDDIKNLDDDLKDIDDEIREYLMEIPNTPNKDVPVGLDDTENLEMRKWGEPRKF 132

Query: 241 S-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEE 293
             + + H  L  ++D+           S    +  KG ++ + L+++M     D   Y E
Sbjct: 133 DFDIKAHWDLGVDLDILDFERATKISKSRFSVFKGKGARLERALMNFMVDLHTDKQGYTE 192

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           +NTP ++     + +G    ++ +MF          +     L P        + +  + 
Sbjct: 193 MNTPVLMSPSAMRGTGQIPKFKEDMFYC--------EKDDMYLAPTAEVPVTNLLSGEIL 244

Query: 354 SYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
               LP+    F   +R E   +     GL+R   F + +   F      ++E  K+ N 
Sbjct: 245 EQGSLPIYYTAFTQCFRREAGSAGRDTRGLIRNHQFEKVEMVKFVEPSTSYDELEKLTNN 304

Query: 411 IISIYKDFGFEKIMVKLSTRPEKR----VGSDALW 441
              I +       +V+L +              +W
Sbjct: 305 AEEILQLLEIPYRVVRLCSGDLGFSSAMTYDIEVW 339


>gi|269959066|ref|YP_003328855.1| alanyl-tRNA synthetase [Anaplasma centrale str. Israel]
 gi|269848897|gb|ACZ49541.1| alanyl-tRNA synthetase [Anaplasma centrale str. Israel]
          Length = 882

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/144 (21%), Positives = 60/144 (41%), Gaps = 9/144 (6%)

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDELA 120
           I  +    L    HS  HI+   +++         G  + ED   +DF+     + +++A
Sbjct: 564 IDVDRRERLKA-NHSATHILHSVLRTHIDGNIQQKGSLVAEDKLRFDFNYASALTKEQIA 622

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IE+++   I  + P L  + S E A        +   + +     ++ +V +   G+  
Sbjct: 623 LIEREVNRRIMSNKPVLTDHCSFEAAV-------QGGAIALFGEKYSEHSVRVVSMGDSK 675

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVA 204
           +LC G HVR TG +  F  + +  
Sbjct: 676 ELCGGTHVRYTGDIGAFKIVSESG 699


>gi|237736819|ref|ZP_04567300.1| alanyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
 gi|229420681|gb|EEO35728.1| alanyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
          Length = 866

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 76/215 (35%), Gaps = 30/215 (13%)

Query: 13  SIKNFPVHATGS--DVAESISRSLAKKAVAVAI-----NGKVCDLSDP--VREGSIEIIT 63
           SI+      T    D       S  + A    I      GKV D+     +   ++EI+ 
Sbjct: 472 SIREGKDGKTLMIFDTTPFYGESGGQTADIGVISGNGFEGKVVDVQKQKGIFTHTVEIVK 531

Query: 64  PEDPRSLAVI-------------RHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFD 109
            E       +              H+  H++ +A++ +        G  +      +DF+
Sbjct: 532 GEAKEGEEYLLEVDEMNRLATAKNHTATHLLHKALREVLGTHVQQAGSLVNGQRLRFDFN 591

Query: 110 KEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKE 169
             +  +S+E+ ++E  + E IA       + +S ++A++         K   +  +   +
Sbjct: 592 HYEAMTSEEIEKVENLVNEKIAESLCVTVRNMSMDEAKKEGAMALFGDKYGDVVRVVKVD 651

Query: 170 NVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVA 204
           + +        +LC G H+ +  ++  F    +  
Sbjct: 652 DFS-------IELCGGTHIDNIAKIGLFKIESESG 679


>gi|223041022|ref|ZP_03611280.1| seryl-tRNA synthetase [Campylobacter rectus RM3267]
 gi|222877694|gb|EEF12817.1| seryl-tRNA synthetase [Campylobacter rectus RM3267]
          Length = 414

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/189 (14%), Positives = 68/189 (35%), Gaps = 16/189 (8%)

Query: 271 KGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
            G ++ + L++YM        +E +N P +++ +    +G    +  +++ V+  D    
Sbjct: 169 MGARLSRALVNYMIDFNSARGFELVNVPFLVNSNTLYGTGQLPKFEEDLYKVQDED---- 224

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGF 386
                 L P +      ++N  +     LP+++  + + +R E   +     G++R   F
Sbjct: 225 ----LYLIPTSEVPVTNLYNDEILPVESLPIKMTCYSACFRKEAGSAGRDTRGMIRQHQF 280

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG----SDALWD 442
            + +     T EQ      ++      +    G     + L +              +W 
Sbjct: 281 EKVELVSITTPEQSAQMLDEMVACASDLLTSLGLPHRHMLLCSGDLGFSAAKTIDLEVWL 340

Query: 443 DAENIMKGV 451
             +N  + +
Sbjct: 341 PGQNKYREI 349


>gi|213864685|ref|ZP_03386804.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
          Length = 34

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/34 (88%), Positives = 33/34 (97%)

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFC 395
           +AEFGS +RNEPSGSLHGLMRVRGFTQDDAH+FC
Sbjct: 1   MAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFC 34


>gi|149369572|ref|ZP_01889424.1| seryl-tRNA synthetase [unidentified eubacterium SCB49]
 gi|149356999|gb|EDM45554.1| seryl-tRNA synthetase [unidentified eubacterium SCB49]
          Length = 423

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/219 (15%), Positives = 73/219 (33%), Gaps = 16/219 (7%)

Query: 208 WRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIA----EDGS 263
           W   +    L     T  + ++   +    +       H +LA++ D+          G+
Sbjct: 105 WTIPNIPNDLVPAGMTEDDNEETFREGDIPVLHEGALPHWELAKKYDIIDFELGVKITGA 164

Query: 264 GVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVK 322
           G   +  KG K+ + LI+Y + +     Y+E+  P ++++           +       K
Sbjct: 165 GFPVYKGKGAKLQRALINYFLDKNTDAGYKEVQVPLLVNE--------ASGFGTGQLPDK 216

Query: 323 CADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSG---SLHG 379
                   +    L P        +F   L    +LP+    +   +R E       + G
Sbjct: 217 EGQMYHVGVDDLYLIPTAEVPVTNMFRDNLVQESDLPITCTGYTPCFRREAGSYGAHVRG 276

Query: 380 LMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
           L R+  F + +       +  +     + + I  I ++ 
Sbjct: 277 LNRLHQFDKVEIVRVEHPDNSYKALDGMVDHITEILREL 315


>gi|148670021|gb|EDL01968.1| seryl-aminoacyl-tRNA synthetase, isoform CRA_a [Mus musculus]
          Length = 515

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/159 (16%), Positives = 54/159 (33%), Gaps = 9/159 (5%)

Query: 275 IFQTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           + Q LI Y +R      Y  I TP  + + + Q+      +   ++ V        D  +
Sbjct: 206 LEQALIQYALRTLGSRGYTPIYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGSEKSDDNS 265

Query: 334 FALKP---MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFT 387
           +  K     +     A+         +LP++ A   + +R E         G+ RV  F 
Sbjct: 266 YDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGRDTRGIFRVHQFE 325

Query: 388 QDDAHVFCTKEQ--MFNECLKIHNLIISIYKDFGFEKIM 424
           + +  V+ +      +    ++       Y+  G    +
Sbjct: 326 KIEQFVYSSPHDNKSWEMFDEMIATAEEFYQSLGIPYHI 364


>gi|95928408|ref|ZP_01311156.1| seryl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
 gi|95135679|gb|EAT17330.1| seryl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
          Length = 424

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 42/244 (17%), Positives = 90/244 (36%), Gaps = 22/244 (9%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGW--KIF 276
           GT+ +   E+ ++    E + E + H  +  ++D+  F  A   +G  F   KG   ++ 
Sbjct: 113 GTSEDDNIEIRRWGTPREFAFEAKAHWDIGEDLDILDFERAGKLTGARFALYKGAGARLE 172

Query: 277 QTLISYMRRKIKDD--YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           + LI++M     +   Y E+  P ++++     +G    +  ++F V+  D        +
Sbjct: 173 RALINFMLDLHTEQHKYVEMLPPFMVNRDSMTGTGQLPKFEEDLFHVEGPD--------Y 224

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDA 391
            L P        +    +    +LP+    +   +R E         GL+R   F + + 
Sbjct: 225 FLIPTAEVPVTNIHRDEILGAEQLPLCYTAYTPCFRKEAGSHGRDTRGLIRQHQFNKVEL 284

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE----KRVGSDALWDDAENI 447
             F   E    E  K+      + +       +V L T        R     +W   +++
Sbjct: 285 VKFVAPENSDAELDKLLANAEKVLQLLELPYRVVDLCTGDIGFSAARTFDIEVWLPGQSV 344

Query: 448 MKGV 451
            + +
Sbjct: 345 YREI 348


>gi|74139849|dbj|BAE31768.1| unnamed protein product [Mus musculus]
          Length = 512

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/159 (16%), Positives = 54/159 (33%), Gaps = 9/159 (5%)

Query: 275 IFQTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           + Q LI Y +R      Y  I TP  + + + Q+      +   ++ V        D  +
Sbjct: 203 LEQALIQYALRTLGSRGYTPIYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGSEKSDDNS 262

Query: 334 FALKP---MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFT 387
           +  K     +     A+         +LP++ A   + +R E         G+ RV  F 
Sbjct: 263 YDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGRDTRGIFRVHQFE 322

Query: 388 QDDAHVFCTKEQ--MFNECLKIHNLIISIYKDFGFEKIM 424
           + +  V+ +      +    ++       Y+  G    +
Sbjct: 323 KIEQFVYSSPHDNKSWEMFDEMIATAEEFYQSLGIPYHI 361


>gi|56416520|ref|YP_153594.1| alanyl-tRNA synthetase [Anaplasma marginale str. St. Maries]
 gi|81599193|sp|Q5PBJ0|SYA_ANAMM RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|56387752|gb|AAV86339.1| alanyl-tRNA synthetase [Anaplasma marginale str. St. Maries]
          Length = 882

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/144 (21%), Positives = 60/144 (41%), Gaps = 9/144 (6%)

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDELA 120
           I  +    L    HS  HI+   +++         G  + ED   +DF+     + +++A
Sbjct: 564 IDVDRRERLKA-NHSATHILHSVLRTHIDGNIQQKGSLVAEDKLRFDFNYASALTKEQIA 622

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
            IE+++   I  + P L  + S E A        +   + +     ++ +V +   G+  
Sbjct: 623 LIEREVNRRIMSNKPVLTDHCSFEAAV-------QGGAIALFGEKYSEHSVRVVSMGDSK 675

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVA 204
           +LC G HVR TG +  F  + +  
Sbjct: 676 ELCGGTHVRYTGDIGAFKIVSESG 699


>gi|225620534|ref|YP_002721791.1| seryl-tRNA synthetase [Brachyspira hyodysenteriae WA1]
 gi|254783009|sp|C0R1U9|SYS_BRAHW RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|225215353|gb|ACN84087.1| seryl-tRNA synthetase [Brachyspira hyodysenteriae WA1]
          Length = 426

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 48/355 (13%), Positives = 117/355 (32%), Gaps = 31/355 (8%)

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKE---NVTLY-RQ 176
           ++ ++  E++  +    +  +S +K + L   + +  K    +     E    +  Y + 
Sbjct: 5   KLIRENIELVEENLRKRRSKVSLDKLKALEHERLDLLKEVEQDRAKKNESSKKIGEYMKA 64

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLY 236
           G   +  +              K  K++      ++    L  +         +      
Sbjct: 65  GNKEEAEKIKEEMKNFTESLNKKEEKLSQLEEAVNNEILYLPNMLSEDVPDGDDEKANKE 124

Query: 237 FLE-------ESEKRDHRKLAREMDL----FHIAEDGSGVIFWHRKGWKIFQTLISYMRR 285
            +        + E +DH  +A  +D+      +    +       KG  + + LI++M +
Sbjct: 125 IIRWGEPRKFDFEVKDHVDIAMGLDILDIERAVRMSRTRFSLMKGKGAALERALINFMLK 184

Query: 286 KI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPG 343
           K   +  Y E   P +++      +G    +  ++F          D     L P     
Sbjct: 185 KHTSEHGYTEYVPPILVNGRTMTGTGQLPKFEEDLFKTT-------DDPALYLIPTAEVP 237

Query: 344 HVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQM 400
              ++   +     LP+    +   +R+E       + GL+R   F + +    C  ++ 
Sbjct: 238 LTNIYREEIIPENMLPLYCTAYTPCFRSEAGSYGRDMRGLIRQHQFDKVELVKICAADKS 297

Query: 401 FNECLKIHNLIISIYKDFGFEKIMVKLST----RPEKRVGSDALWDDAENIMKGV 451
             E  K+     SI +       +V LS+        +     +W  ++N+ + +
Sbjct: 298 KEEHEKMLKDAESILQALELPYRVVVLSSGDIGNAAYKTFDIEVWLPSQNMYREI 352


>gi|87198872|ref|YP_496129.1| seryl-tRNA synthetase [Novosphingobium aromaticivorans DSM 12444]
 gi|123736268|sp|Q2GA28|SYS_NOVAD RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|87134553|gb|ABD25295.1| seryl-tRNA synthetase [Novosphingobium aromaticivorans DSM 12444]
          Length = 426

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/246 (14%), Positives = 78/246 (31%), Gaps = 24/246 (9%)

Query: 220 IYGTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDL-FHIAEDGSGVIF-WHRKG--WK 274
             G       E++++    + +   ++H  L   + L F      SG  F +  KG   +
Sbjct: 114 PEGADEADNVEVSRWGTPRDFAFAPKEHADLGPALGLDFETGALISGARFTFL-KGQMAR 172

Query: 275 IFQTLISYM--RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           + + L  +M  R+  ++ Y E   P ++       +G    +  ++F          D R
Sbjct: 173 LHRALAQFMLDRQTGENGYMECIPPLLVKDEAVFGTGQLPKFAEDLFRTT-------DGR 225

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQD 389
                P             +    +LP+R+      +R+E   +     G +R   F + 
Sbjct: 226 WLI--PTAEVSLTNAVQGQILGEAQLPLRMTALTPCFRSEAGAAGRDTRGFIRQHQFEKV 283

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI----MVKLSTRPEKRVGSDALWDDAE 445
           +       E   +E  ++      I +  G                 ++     +W   +
Sbjct: 284 ELVSITRPEDSESEHERMTQCAEGILQALGLPYRKVLLCTGDMGFTARKTYDLEVWLPGQ 343

Query: 446 NIMKGV 451
              + +
Sbjct: 344 GAYREI 349


>gi|16331375|ref|NP_442103.1| histidyl-tRNA synthetase [Synechocystis sp. PCC 6803]
 gi|2501002|sp|Q55653|SYH_SYNY3 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|1001546|dbj|BAA10173.1| histidyl-tRNA synthetase [Synechocystis sp. PCC 6803]
          Length = 447

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 68/198 (34%), Gaps = 18/198 (9%)

Query: 446 NIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSR 505
           + ++ +L  +  + Q  +   ++ G   +    FE    D   +   CG  + D  +   
Sbjct: 237 DQVQQLLTNLGIAYQ--LTPTLVRGLDYYTHTAFEIQSSDLGAQATVCGGGRYDGLVAE- 293

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAV 565
                         PV         +ER I I+++      P   SP    + +    A 
Sbjct: 294 -----------LGGPVTPAVGWAMGLERLI-ILLQQMA--TPPAPSPD-LYLISKGEKAE 338

Query: 566 EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
             A  +A  L++  L++  D        + +          ++ GD E +  ++ ++   
Sbjct: 339 PQALILAQKLRNQGLAVALDLSASAFGKQFKRADKSGAIACLVLGDGEIATGTVQLKWLA 398

Query: 626 STTTQKVSLLDAIPILTK 643
               + + L D +  +T+
Sbjct: 399 DKAQETLQLQDLMGNITE 416


>gi|312795387|ref|YP_004028309.1| Seryl-tRNA synthetase [Burkholderia rhizoxinica HKI 454]
 gi|312167162|emb|CBW74165.1| Seryl-tRNA synthetase (EC 6.1.1.11) [Burkholderia rhizoxinica HKI
           454]
          Length = 430

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/188 (13%), Positives = 59/188 (31%), Gaps = 11/188 (5%)

Query: 273 WKIFQTLISYMRRKIK--DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M         Y E  TP +++      +G    +  +MF V+      K 
Sbjct: 169 ARLHRALAQFMLDTHTQTHGYTECYTPYIVNPESLYGTGQLPKFADDMFRVEKGGGDNKV 228

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
            +       +           +     LP+RL      +R+E         G++R   F 
Sbjct: 229 TQYLIS--TSEISLTNTVRDSIVDADRLPIRLTAHSPCFRSEAGAYGRDTRGMIRQHQFD 286

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +     + +  +    ++     +I +       ++ L T              +W  
Sbjct: 287 KVEMVQITSPDSSYQALEEMVGHAETILQRLELPYRVITLCTGDMGFSAAKTYDLEVWLP 346

Query: 444 AENIMKGV 451
           A+   + +
Sbjct: 347 AQRAYREI 354


>gi|262274498|ref|ZP_06052309.1| seryl-tRNA synthetase [Grimontia hollisae CIP 101886]
 gi|262221061|gb|EEY72375.1| seryl-tRNA synthetase [Grimontia hollisae CIP 101886]
          Length = 428

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/188 (13%), Positives = 61/188 (32%), Gaps = 12/188 (6%)

Query: 273 WKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + +  +M      +  Y E+  P +++      +G    +  ++F  K A    ++
Sbjct: 170 ARLHRAIAQFMLDLHTTEHGYTEMYVPYLVNADSLFGTGQLPKFGEDLFHTKPA---TEE 226

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
               +L P        +    +    +LP+R+      +R+E         GL+R+  F 
Sbjct: 227 GVGMSLIPTAEVPLTNMVRDTIVEEADLPIRMTAHTPCFRSEAGSYGRDTRGLIRMHQFD 286

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E       ++      + +        V L T              +W  
Sbjct: 287 KVELVQIVKPEDSMAALEELTGHAEKVLQLLKLPYRKVILCTGDMGFGSAKTYDLEVWVP 346

Query: 444 AENIMKGV 451
           A+   + +
Sbjct: 347 AQGTYREI 354


>gi|254556005|ref|YP_003062422.1| seryl-tRNA synthetase [Lactobacillus plantarum JDM1]
 gi|254044932|gb|ACT61725.1| seryl-tRNA synthetase [Lactobacillus plantarum JDM1]
          Length = 425

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/178 (17%), Positives = 66/178 (37%), Gaps = 16/178 (8%)

Query: 272 GWKIFQTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G K+ + + ++ + +   + Y E+  P ++       +G +  ++ + F +   D T+  
Sbjct: 170 GAKLERAVYNFFLDQHEAEGYTEVLPPYMVTDESMYGTGQFPKFKEDAFRITTQDLTLI- 228

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFT 387
                  P      V  +   +    +LPV        +R E   +     GL+R+  F 
Sbjct: 229 -------PTAEVPLVNYYRDEVIPAEKLPVYFTALSPAFREEAGSAGRDTKGLIRLHQFN 281

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALW 441
           + +   F   E  ++E  K+ N   S+ K  G    ++ L+T              +W
Sbjct: 282 KVEMVKFTKPEDSWDELEKLTNNAESLLKKLGLPYHVITLTTGDMSFTAAMTHDLEVW 339


>gi|254252258|ref|ZP_04945576.1| Histidyl-tRNA synthetase [Burkholderia dolosa AUO158]
 gi|124894867|gb|EAY68747.1| Histidyl-tRNA synthetase [Burkholderia dolosa AUO158]
          Length = 446

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 62/426 (14%), Positives = 131/426 (30%), Gaps = 74/426 (17%)

Query: 269 HRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ--QSGHWDSYRANMFAVKCAD 325
             +   +++   + ++  ++   Y+ I TP V    L+        D     M++   A 
Sbjct: 21  LPQDAALWEFFEATVKSLLRAYGYQNIRTPIVEHTQLFTRGIGEVTDIVEKEMYSFTDAL 80

Query: 326 DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRG 385
           +         ++P N    V           + P RL   G ++R E         R R 
Sbjct: 81  N----GEHLTMRPEN-TAAVVRAAIEHNMLYDGPKRLWYIGPMFRLERPHR----GRYRQ 131

Query: 386 FTQ--DDAHVFCTKEQMFNECLKIHNLIISIYKDFG--------------FEKIMVKLST 429
           F Q   +A  F   +       +I  +   ++ D G               E+   ++  
Sbjct: 132 FHQVGVEALGFAGPDADA----EIIMMCQRLWDDLGLTGIKLEINSLGLAEERAAHRVEL 187

Query: 430 RPEKRVGSDALWDDAENIM-----------KGVLDTIKNSSQDRINTGVLLGEGAFYGP- 477
                   D L +DA+  +              L  I  ++   I+         F G  
Sbjct: 188 IKYLEQHVDVLDEDAKRRLYTNPLRVLDTKNPALQEIAQNAPKLIDFLGDQSRAHFEGLQ 247

Query: 478 ------KFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIH------- 524
                    + +   + R      + V   +  +  A    +   +  P++         
Sbjct: 248 RLLLANNVPFKINPRLVRGLDYYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQLGGKPTA 307

Query: 525 RAVFGS-IERFIGIMIENFKGNLPLWLSPIQ----AIVTTITSSAVEYAQEIANLLKSHH 579
              +   IER + ++ E         L+P Q      V     +A E A   A  L+   
Sbjct: 308 ACGWAMGIERILELLKEED-------LAPEQEGVDVYVVHQGEAAREQAFIAAERLRDTG 360

Query: 580 LSI----ETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRR-FGSTTTQKVSL 634
           L +      D    +   +++          +I G++E +  + G++   G+    + ++
Sbjct: 361 LDVIFHCSADGAPASFKSQMKRADASGAAFAVIFGEEEVANGTAGVKALRGTGDEGEKNV 420

Query: 635 LDAIPI 640
              +P+
Sbjct: 421 QQTVPV 426


>gi|312220920|emb|CBY00861.1| similar to glycyl-tRNA synthetase [Leptosphaeria maculans]
          Length = 658

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/143 (13%), Positives = 52/143 (36%), Gaps = 14/143 (9%)

Query: 514 HSEKCHPVMIHRAVFGSIERFIGIMIENFK-----------GNLPLWLSPIQAIVTTIT- 561
            + + +   +    FG I R    + E+              + P  ++P + ++  ++ 
Sbjct: 493 ENVREYTPNVIEPSFG-IGRIFYALCEHVYWTREQDKARGVLSFPPAVAPTKVLIVPLSS 551

Query: 562 -SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
                 + Q + + L+S  +S   D    +I  +   +     P+ I    +   + +  
Sbjct: 552 HPDFSPFVQTLRSKLRSIGISSRIDASGASIGKRYSRNDELGTPLGITVDFQSVKDNTFT 611

Query: 621 IRRFGSTTTQKVSLLDAIPILTK 643
           +R   ST   + S+ + I  ++ 
Sbjct: 612 LRDRDSTEQVRASIDEIIAAISN 634



 Score = 41.3 bits (95), Expect = 0.53,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 2/70 (2%)

Query: 335 ALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
            L+P    G    F + L+ + +++P   A  G  +RNE S    GL+RVR F   +   
Sbjct: 218 YLRPETAQGQFVNFQNLLEDNQQQMPFASASIGKSFRNEISPR-SGLLRVREFLMAEIEH 276

Query: 394 FCTKEQMFNE 403
           F   E     
Sbjct: 277 FVDPEGGKKH 286


>gi|228914977|ref|ZP_04078580.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|228844642|gb|EEM89690.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
          Length = 50

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 26/45 (57%)

Query: 600 IKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
           ++K+P +++ GDKE    ++ +R++G   +  + L   +  + +E
Sbjct: 1   MQKVPYVLVIGDKEMENGAVNVRKYGEEKSDVIELDMFVESMKEE 45


>gi|227891107|ref|ZP_04008912.1| alanyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
 gi|227866981|gb|EEJ74402.1| alanyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
          Length = 917

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/133 (16%), Positives = 53/133 (39%), Gaps = 10/133 (7%)

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPIIEDGF-YYDFDKEQPFSSDELAQIEKKMQEIIAR 132
            H+  H++ +A++ +        G ++E  +  +DF      ++++L +IE  +   I  
Sbjct: 604 NHTATHLLDQALRDVLGSHTHQAGSLVEPTYLRFDFTNLGSVTAEDLKKIEDIVNAKIWE 663

Query: 133 DSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRST 191
           +          E A ++        K          + V + + G++  + C G HV +T
Sbjct: 664 NIQVETVVTDKESAEKMGAIALFGDKY--------GDTVRVVKVGDYSMEFCGGTHVANT 715

Query: 192 GQVKKFFKLMKVA 204
            ++  F  + +  
Sbjct: 716 NEIGLFKIVSESG 728


>gi|288958288|ref|YP_003448629.1| seryl-tRNA synthetase [Azospirillum sp. B510]
 gi|288910596|dbj|BAI72085.1| seryl-tRNA synthetase [Azospirillum sp. B510]
          Length = 423

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/243 (16%), Positives = 81/243 (33%), Gaps = 21/243 (8%)

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHI--AEDGSGVIFWHRKG--WKIFQ 277
           G       E+ ++      +  + H +L   + L     A   SG  F   KG   ++ +
Sbjct: 114 GKDETENVEVRRWGTPANIANPKQHYELGEALGLMDFEAAARMSGARFTVLKGGLARLER 173

Query: 278 TLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFA 335
            L  +M      +  + EI  P ++       +G    +  ++F    +D          
Sbjct: 174 ALADFMLDIHTSEHGFTEIAPPLMVRDTALFGTGQLPKFEEDLFKTTASDH--------Y 225

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAH 392
           L P +      + N  + +  ELP+R       +R E   +     G++R   F + +  
Sbjct: 226 LIPTSEVPLTNLVNDQIVAAEELPLRYTALTPCFRAEAGSAGRDTRGMIRQHQFWKVEMV 285

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIM 448
                +Q  +E  ++     +I +  G     + L T              +W   +N  
Sbjct: 286 AITAPDQSEDEHQRMTRCAETILERLGLPYRTIVLCTGDMGFSSRKTYDVEVWLPGQNAY 345

Query: 449 KGV 451
           + +
Sbjct: 346 REI 348


>gi|260435174|ref|ZP_05789144.1| histidyl-tRNA synthetase [Synechococcus sp. WH 8109]
 gi|260413048|gb|EEX06344.1| histidyl-tRNA synthetase [Synechococcus sp. WH 8109]
          Length = 430

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 14/94 (14%), Positives = 32/94 (34%)

Query: 555 AIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
             +     +A   A  +A  L++  L +E D        + +       P  ++ G+ EA
Sbjct: 337 VYLVNRGDAAERSALALARDLRASGLRVELDASGSAFGKQFKRADRSGAPWALVIGEDEA 396

Query: 615 SERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
               + ++       +    L  +  + +  L P
Sbjct: 397 ERGEVRLKALNQQAEESTVALAPVSAIVERLLTP 430


>gi|13541818|ref|NP_111506.1| seryl-tRNA synthetase [Thermoplasma volcanium GSS1]
 gi|30173200|sp|Q979Z3|SYS_THEVO RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|14325255|dbj|BAB60159.1| tRNA synthetase Ser [Thermoplasma volcanium GSS1]
          Length = 441

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 74/188 (39%), Gaps = 16/188 (8%)

Query: 273 WKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDL 331
            K+   L +Y    + +  +  +  P +L+    + +   ++++  ++ ++  D      
Sbjct: 191 LKLEMALENYAVDFLSQRGFTVVEPPYMLNLESMRGATDLETFKDTLYKIEDED------ 244

Query: 332 RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQ 388
               L   +     ++ ++     +ELP+R+A   + +R E         G+ RV  F +
Sbjct: 245 --LYLIATSEHSIASMLSNEFLEEKELPIRVAGVSACFRREAGAHGKDTKGIFRVHQFNK 302

Query: 389 DDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST----RPEKRVGSDALWDDA 444
            +  +FC  E  ++   +I +    IY+  G    +V + +    R   +      W  A
Sbjct: 303 IEQFIFCKPEDSWDYLEEILSNAEEIYRSLGIPYRVVNVCSGELGRLAAKKYDIEAWFPA 362

Query: 445 ENIMKGVL 452
           +   + ++
Sbjct: 363 QGKFREIV 370


>gi|329930188|ref|ZP_08283801.1| serine--tRNA ligase [Paenibacillus sp. HGF5]
 gi|328935210|gb|EGG31691.1| serine--tRNA ligase [Paenibacillus sp. HGF5]
          Length = 427

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/190 (17%), Positives = 67/190 (35%), Gaps = 17/190 (8%)

Query: 261 DGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANM 318
            GS   F+   G ++ + LIS+M     D   YEE+  P ++++     +G    +  ++
Sbjct: 159 TGSRFTFYKGLGARLERALISFMMDLHSDKHGYEEMLPPYIVNRDSLYGTGQLPKFEEDL 218

Query: 319 FAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS-- 376
           F +   D        + L P             + +  +LP     + S +R+E   +  
Sbjct: 219 FKISDTD--------YYLIPTAEVPVTNYHREEILNSEDLPKYYVAYSSCFRSEAGAAGR 270

Query: 377 -LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR- 434
              GL+R   F + +       E  F+E  K+      + +       ++ L T      
Sbjct: 271 DTRGLIRQHQFNKVEMVKIVHPETSFDELEKMTADAERVLQLLNLPYRVMTLCTGDMGFG 330

Query: 435 ---VGSDALW 441
                   +W
Sbjct: 331 SMKTYDLEVW 340


>gi|319740175|gb|ADV60381.1| glu- + pro-tRNA synthetase [Phiditia sp. JCR-2009]
          Length = 134

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 57/133 (42%), Gaps = 18/133 (13%)

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           GA Y    E  +  A GR  Q  T   +  N    F   + +  +++ +   +++  +G 
Sbjct: 1   GADYTTTVEAYIP-ASGRAIQGATSHHLGQNFSKMFEIVFDDQDTQEKN--YVYQNSWGI 57

Query: 531 IERFIGIMI----ENFKGNLPLWLSPIQAIVTTITSSA----------VEYAQEIANLLK 576
             R IG+M+    ++    LP +++ +QAIV     +A          ++  + + + L 
Sbjct: 58  TTRTIGVMVLVHGDDKGLVLPPYIAEVQAIVVPCGITASSSAEERKNLIDSCKALVDDLI 117

Query: 577 SHHLSIETDFRNE 589
           +  +  E D+R+ 
Sbjct: 118 AGGIRAEGDYRDN 130


>gi|317036964|ref|XP_001398427.2| glycyl-tRNA synthetase 1 [Aspergillus niger CBS 513.88]
          Length = 738

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/213 (13%), Positives = 71/213 (33%), Gaps = 17/213 (7%)

Query: 450 GVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAF 509
             +D +    +++++  +          K E  ++   G   +     +     +R    
Sbjct: 522 AAIDALSQELREKLSLDLEQTG------KIEVEVEGVAGGKVELDKELIKIEKRTRVENV 575

Query: 510 YVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGN----LPLWLSPIQAIVTTIT--SS 563
              + +       I R ++  IE  +    E  +       P  ++P + ++  ++   S
Sbjct: 576 REYTPNVIEPSFGIGRILYSMIE-QVYWSREGDEARGVLSFPPAIAPTKVLIVPLSTHQS 634

Query: 564 AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRR 623
                Q +   L+   +S   D  + +I  +   +     P  +    +   + +  +R 
Sbjct: 635 FAPLVQRLTTKLRRMGVSNRVDDSSASIGKRYARNDELGTPFGVTVDFQSVKDNTFTLRD 694

Query: 624 FGSTTTQKVSLLD---AIPILTK-ESLPPDCQK 652
             ST   + S  +   AI  L + E    D +K
Sbjct: 695 RDSTKQVRASEDEIAQAIKSLVEGEETWEDVRK 727


>gi|307728953|ref|YP_003906177.1| seryl-tRNA synthetase [Burkholderia sp. CCGE1003]
 gi|307583488|gb|ADN56886.1| seryl-tRNA synthetase [Burkholderia sp. CCGE1003]
          Length = 431

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/243 (15%), Positives = 81/243 (33%), Gaps = 15/243 (6%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDL-FHIAEDGSGVIFWHRKG--WKIFQ 277
           G       E+ ++    +   E +DH  +   + L F      SG  F   +G   ++ +
Sbjct: 114 GRDEADNVEVRRWGTPRQFDFEVKDHVDVGAPLGLDFETGAKLSGARFTMLRGQIARLHR 173

Query: 278 TLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFA 335
            L  +M      +  Y EI TP +++  +   +G    +  +MF V+         +   
Sbjct: 174 ALAQFMIDTHTQQHGYTEIYTPYIVNPEILYGTGQLPKFADDMFRVEKGGGENTVTQYLI 233

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAH 392
               +           +     LP++L      +R+E         G++R   F + +  
Sbjct: 234 S--TSEISLTNTVRESIVEGNALPIKLTAHSPCFRSEAGSYGRDTRGMIRQHQFDKVEMV 291

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIM 448
                E  ++   ++     +I +       ++ L T              +W  A+N  
Sbjct: 292 QIVAPETSYDALEQMVGHAETILQKLELPYRVITLCTGDMGFSATKTYDLEVWLPAQNTY 351

Query: 449 KGV 451
           + +
Sbjct: 352 REI 354


>gi|217316867|gb|ACK37839.1| putative glutamyl-prolyl tRNA synthetase [Discias sp. AT-2008]
          Length = 134

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 48/133 (36%), Gaps = 18/133 (13%)

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           G  Y    E     A GR  Q  T   +  N    F+  + +  +++      ++  +G 
Sbjct: 1   GGDYTTTVE-AFVSANGRAIQGATSHHLGQNFSKMFDIVFEHPETQQKQ--FCYQNSWGL 57

Query: 531 IERFIGIMIENFKGNLPLWLSP----IQAIVTTITSSA----------VEYAQEIANLLK 576
             R IG+M+     N  L L P    +QAI+     +A           +  +++   LK
Sbjct: 58  TTRTIGVMVMVHGDNKGLVLPPRVAAVQAIIMPCGVTAKITEQEKBNLYDACKKLEEELK 117

Query: 577 SHHLSIETDFRNE 589
              +    D R+ 
Sbjct: 118 CAGIRARCDLRDN 130


>gi|261403954|ref|YP_003240195.1| seryl-tRNA synthetase [Paenibacillus sp. Y412MC10]
 gi|261280417|gb|ACX62388.1| seryl-tRNA synthetase [Paenibacillus sp. Y412MC10]
          Length = 427

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/190 (17%), Positives = 67/190 (35%), Gaps = 17/190 (8%)

Query: 261 DGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANM 318
            GS   F+   G ++ + LIS+M     D   YEE+  P ++++     +G    +  ++
Sbjct: 159 TGSRFTFYKGLGARLERALISFMMDLHSDKHGYEEMLPPYIVNRDSLYGTGQLPKFEEDL 218

Query: 319 FAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS-- 376
           F +   D        + L P             + +  +LP     + S +R+E   +  
Sbjct: 219 FKISDTD--------YYLIPTAEVPVTNYHREEILNSEDLPKYYVAYSSCFRSEAGAAGR 270

Query: 377 -LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR- 434
              GL+R   F + +       E  F+E  K+      + +       ++ L T      
Sbjct: 271 DTRGLIRQHQFNKVEMVKIVHPETSFDELEKMTADAERVLQLLNLPYRVMTLCTGDMGFG 330

Query: 435 ---VGSDALW 441
                   +W
Sbjct: 331 SMKTYDLEVW 340


>gi|319427213|gb|ADV55287.1| alanyl-tRNA synthetase [Shewanella putrefaciens 200]
          Length = 874

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/141 (19%), Positives = 55/141 (39%), Gaps = 10/141 (7%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSD 117
           +E    +  R    + HS  H++  A++ +        G +++     +DF   +     
Sbjct: 546 VEAKVDKKLRHRTQLNHSVTHLLHAALRQVLGTHVTQKGSLVDPERLRFDFSHFEAVKPA 605

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           EL Q+E+ +   I R+       ++ ++A+E         K            V +   G
Sbjct: 606 ELKQVEELVNTQIRRNHELKVAEMAIDEAKEKGAMALFGEKY--------DAQVRVVTMG 657

Query: 178 EW-FDLCRGPHVRSTGQVKKF 197
           ++  +LC G HV  TG +  F
Sbjct: 658 DFSIELCGGTHVGRTGDIGLF 678


>gi|160876373|ref|YP_001555689.1| alanyl-tRNA synthetase [Shewanella baltica OS195]
 gi|205830203|sp|A9KYF8|SYA_SHEB9 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|160861895|gb|ABX50429.1| alanyl-tRNA synthetase [Shewanella baltica OS195]
 gi|315268563|gb|ADT95416.1| alanyl-tRNA synthetase [Shewanella baltica OS678]
          Length = 874

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 55/141 (39%), Gaps = 10/141 (7%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSD 117
           +E    +  R    + HS  H++  A++ +        G +++     +DF   +   + 
Sbjct: 546 VEAKVDKKLRHRTQLNHSVTHLLHAALRQVLGTHVSQKGSLVDPERLRFDFSHFEGVKAT 605

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           EL ++E+ +   I R+       +  ++A+E         K            V +   G
Sbjct: 606 ELKEVEELVNTQIRRNHELKTAEMGIDEAKEKGAMALFGEKY--------DSQVRVVTMG 657

Query: 178 EW-FDLCRGPHVRSTGQVKKF 197
           ++  +LC G HV  TG +  F
Sbjct: 658 DFSIELCGGTHVGRTGDIGLF 678


>gi|329724728|gb|EGG61234.1| alanine--tRNA ligase [Staphylococcus epidermidis VCU144]
          Length = 876

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/139 (20%), Positives = 58/139 (41%), Gaps = 10/139 (7%)

Query: 55  REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQP 113
           +   +E    ++ R L    HS  H++  A++ +  +     G ++E     +DF    P
Sbjct: 545 QNAKVEARVNKEDRRLIQKNHSATHLLHAALKEVLGDHVNQAGSLVEPERLRFDFSHFGP 604

Query: 114 FSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTL 173
            + +E+  +E+++ E I R      Q +S E+A+ +        K          + V +
Sbjct: 605 MTQEEINLVERRVNEEIWRAIDVRIQEMSIEEAKSIGAMALFGEKY--------GDIVRV 656

Query: 174 YRQGEW-FDLCRGPHVRST 191
                +  +LC G HV +T
Sbjct: 657 VNMAPFSIELCGGIHVNNT 675


>gi|311894343|dbj|BAJ26751.1| putative seryl-tRNA synthetase [Kitasatospora setae KM-6054]
          Length = 420

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 68/189 (35%), Gaps = 15/189 (7%)

Query: 272 GWKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
           G ++ + L S++         Y E++ P ++ +     +G    +  ++F  + A+    
Sbjct: 161 GARLERALASFLLDLHTREHGYVEMSVPHLVTRESMTATGQLPKFADDLFGTRAAE---- 216

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGF 386
             R   L P      V +F     S   LP+ +    + +R+E         G++R+  F
Sbjct: 217 --RELFLIPTAEVPLVNLFRGETLSSAALPLAVTAHTACFRSEAGSYGRDTRGVIRLHEF 274

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP----EKRVGSDALWD 442
            + +    C  +   +E   +        +  G    +V+L T       +R     +W 
Sbjct: 275 AKVELVRLCAAQDARHEHEVLLGHAEEALRRLGLHYRVVELRTGDLGFSARRTYDLEVWL 334

Query: 443 DAENIMKGV 451
             +   + +
Sbjct: 335 PGQQRYREI 343


>gi|224538465|ref|ZP_03679004.1| hypothetical protein BACCELL_03359 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224519933|gb|EEF89038.1| hypothetical protein BACCELL_03359 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 272

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/168 (14%), Positives = 57/168 (33%), Gaps = 12/168 (7%)

Query: 271 KGWKIFQTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
           KG ++ + LI++ +    K  Y EI  P V++            Y       K       
Sbjct: 21  KGAQLQRALINFFLDEARKAGYLEIMPPTVVNA--------ASGYGTGQLPDKEGQMYHC 72

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGF 386
           ++    L P        ++   +   ++LP++   +   +R E       + GL R+  F
Sbjct: 73  EVDDLYLIPTAEVPVTNIYRDVILEEKQLPIKNCAYTQCFRREAGSYGKDVRGLNRLHEF 132

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
           ++ +       E       ++ + +  + +       +++L       
Sbjct: 133 SKVELVRIDKPEHSRQSHKEMLDHVEGLLQKLELPYRILRLCGGDMSF 180


>gi|54308358|ref|YP_129378.1| seryl-tRNA synthetase [Photobacterium profundum SS9]
 gi|67461771|sp|Q6LT00|SYS_PHOPR RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|46912786|emb|CAG19576.1| Putative seryl-tRNA synthetase [Photobacterium profundum SS9]
          Length = 430

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/188 (13%), Positives = 62/188 (32%), Gaps = 12/188 (6%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + +  +M     +   Y E+  P +++      +G    +  ++F  K A    ++
Sbjct: 172 ARLHRAIAQFMLDLHTEEHGYTEMYVPYLVNADSLFGTGQLPKFGEDLFHTKPA---TEE 228

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
               +L P        +    +    +LP+++      +R+E         GL+R+  F 
Sbjct: 229 GVGMSLIPTAEVPVTNMVRDTITDEADLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFD 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E       ++      + +        V L T              +W  
Sbjct: 289 KVELVQITKPEDSMAALEELTGHAEKVLQLLELPYRKVILCTGDMGFGAAKTYDLEVWVP 348

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 349 AQNTYREI 356


>gi|300741590|ref|ZP_07071611.1| GTP diphosphokinase [Rothia dentocariosa M567]
 gi|300380775|gb|EFJ77337.1| GTP diphosphokinase [Rothia dentocariosa M567]
          Length = 801

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 1/68 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEI 61
            +I +  PDG     P  +T  D A +I   +  + V   +NG++  L   +  GS +EI
Sbjct: 457 DEIVVLTPDGEAIALPAGSTPVDFAYAIHSEVGDRTVGAKVNGRLVPLHTVLPTGSTVEI 516

Query: 62  ITPEDPRS 69
            T ++  +
Sbjct: 517 TTTKNEDA 524


>gi|294669536|ref|ZP_06734603.1| hypothetical protein NEIELOOT_01435 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291308449|gb|EFE49692.1| hypothetical protein NEIELOOT_01435 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 873

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/165 (23%), Positives = 67/165 (40%), Gaps = 14/165 (8%)

Query: 36  KKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           K AV     G V      V +  S EI    D R   +  HS  H+M +A++ +      
Sbjct: 525 KAAVHGQF-GAVVSGRLKVGDAVSAEI--DNDIRDSIMRNHSVTHLMHKALRDVLGTHVE 581

Query: 95  AIGPIIEDGF-YYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESK 153
             G +       +D    Q  S++E+A++E+++   I  + P   + +S E A++     
Sbjct: 582 QKGSLQNAELTRFDISHTQGISAEEIAEVERRVNAAIIANVPVKVETMSIEDAQKSGAVM 641

Query: 154 KEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
               K          + V +   G++  +LC G HV  TG +  F
Sbjct: 642 LFGEKY--------GDFVRVITMGDYSIELCGGTHVARTGDIGFF 678


>gi|238022662|ref|ZP_04603088.1| hypothetical protein GCWU000324_02571 [Kingella oralis ATCC 51147]
 gi|237865865|gb|EEP67001.1| hypothetical protein GCWU000324_02571 [Kingella oralis ATCC 51147]
          Length = 963

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 67/164 (40%), Gaps = 12/164 (7%)

Query: 36  KKAVAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVA 95
           K AV     G +   S  V +     +      ++ +  HS  H+M +A++ +       
Sbjct: 614 KAAVHGHF-GTLVSGSLKVGDSICAEVDNVVREAI-MRNHSVTHLMHKALRDVLGTHVEQ 671

Query: 96  IGPIIEDGF-YYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            G +       +D    Q  +++E+A++E+++   I ++ P   + +S E A++      
Sbjct: 672 KGSLQNAELTRFDISHPQAITAEEIAEVERRVNHAIMQNVPVRVETMSLEDAQKSGAMML 731

Query: 155 EAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
              K          + V +   G++  +LC G HV  TG +  F
Sbjct: 732 FGEKY--------GDFVRVITMGDYSTELCGGTHVARTGDIGFF 767


>gi|148998081|ref|ZP_01825594.1| histidyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
 gi|168575992|ref|ZP_02721897.1| histidyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
 gi|307068738|ref|YP_003877704.1| histidyl-tRNA synthetase [Streptococcus pneumoniae AP200]
 gi|147756091|gb|EDK63134.1| histidyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
 gi|183578088|gb|EDT98616.1| histidyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
 gi|306410275|gb|ADM85702.1| Histidyl-tRNA synthetase [Streptococcus pneumoniae AP200]
          Length = 429

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 60/404 (14%), Positives = 126/404 (31%), Gaps = 56/404 (13%)

Query: 276 FQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           +Q +  + R   K  +Y E+ TP       ++          ++   +  D   K  R  
Sbjct: 20  WQYVEGFAREIFKRYNYAEVRTPIF---EHYEVISRSVGDTTDIVTKEMYDFYDKGDRHI 76

Query: 335 ALKPMNCPGHVAVFNHGLKS-----YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD 389
            L+P    G   V    +++       + P +    G ++R E   +     R+R F Q 
Sbjct: 77  TLRP---EGTAPVVRSYVENKLFAPEVQKPSKFYYMGPMFRYERPQA----GRLRQFHQI 129

Query: 390 DAHVFCTKEQM-FNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWD------ 442
               F +       E + +    +      G +  +  L     +     AL D      
Sbjct: 130 GVECFGSSNPATDVETIVMAAHFLKEIGIQGVKLHLNTLGNPESRAAYRQALIDYLTPLK 189

Query: 443 -----DAENIMKG----VLDTIKNSSQDR-------INTGVLLGEGAFYGPK-------F 479
                D++  ++     VLD+ +   +         ++      +  F   +        
Sbjct: 190 ETLSKDSQRRLEENPLRVLDSKEKEDKVAVENAPSILDFLDEESQTHFDAVRQMLENLGV 249

Query: 480 EYILKDAI--GRDWQCGTIQVDFNLPSRFNAFYVN---SHSEKCHPVMIHRAVFG---SI 531
           +YI+   +  G D+   TI          +              +      A FG    +
Sbjct: 250 DYIIDTNMVRGLDYYNHTIFEFITEIEGNDLTVCAGGRYDGLVAYFGGPETAGFGFGLGV 309

Query: 532 ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETI 591
           ER + I+    +G      + +   +  +   A   A E+   L+      E D+ N  +
Sbjct: 310 ERLLLIL--EKQGVTLPIENALDVYIAVLGEGANIKALELVQALRQQGFKAERDYLNRKL 367

Query: 592 NYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
             + +   +     +I  G+ E     + ++   +    +VSL 
Sbjct: 368 KAQFKSADVFVAKTLITLGESEVESGQVTVKNNQTREEVQVSLE 411


>gi|89892754|ref|YP_516241.1| seryl-tRNA synthetase [Desulfitobacterium hafniense Y51]
 gi|122484260|sp|Q252J5|SYS_DESHY RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|89332202|dbj|BAE81797.1| seryl-tRNA synthetase [Desulfitobacterium hafniense Y51]
          Length = 421

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 54/342 (15%), Positives = 108/342 (31%), Gaps = 43/342 (12%)

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKE-AYKVEILESIPAKENVTLYRQG 177
           L ++E    +         ++    E A +L    +E   KV+ LE     + +    Q 
Sbjct: 41  LFEVESLKAKRNTVSEEVGRRKKHGEDAEQLILEMREVGQKVKNLE-----DKLGEIEQS 95

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
               L   P++          +   V    W             GT  +   E   +   
Sbjct: 96  MEAVLYEIPNIPHESVPVGADEEANVEVRTW-------------GTPRSFDFEPLAHYEI 142

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINT 296
            E+ +  D  +  +               F+   G K+ + LIS+M  R     Y E+  
Sbjct: 143 GEKLDILDFARAGKVTGARFT--------FYKGLGAKLERALISFMLDRHSAKGYVEVLP 194

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P ++ ++    +G    +  + F V            + L P        ++   +    
Sbjct: 195 PYMVHRNSMIGTGQLPKFEEDAFKV--------AGTDYFLIPTAEVPVTNMYREEILEAE 246

Query: 357 ELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           +LP+    + + +R E   +     GL+R   F + +   F   E  + E   +     S
Sbjct: 247 QLPIHHCAYSACFRAEAGSAGRDTRGLIRQHQFNKVELVKFAFPENSYEELESLTRDAES 306

Query: 414 IYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
           I ++      ++ LST              +W  + N  + +
Sbjct: 307 ILQELELPYRVMALSTGDLGFTSAKTYDLEVWLPSFNTYREI 348


>gi|254525623|ref|ZP_05137675.1| histidyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
 gi|221537047|gb|EEE39500.1| histidyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
          Length = 426

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 63/419 (15%), Positives = 138/419 (32%), Gaps = 64/419 (15%)

Query: 269 HRKGWKIFQTLISYMRRKIKDDYE-EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
                  +Q +   +  ++      EI TP +    + +          ++ + +     
Sbjct: 14  LPNKLIKWQNVEKILLEQLSRASIKEIRTPIL---EMTELFVRGIGEGTDVVSKEMYTFL 70

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKS-YRELPV-RLAEFGSVYRNEPSGSLHGLMRVRG 385
            +  R+  L+P    G  +V    ++S     P+ +L   G ++R E   +     R R 
Sbjct: 71  DRGERSCTLRP---EGTASVARALIQSGISSNPLQKLWYMGPMFRYERPQA----GRQRQ 123

Query: 386 FTQ----DDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALW 441
           F Q       H     +      ++I  L   I    G +++ ++++T       S+   
Sbjct: 124 FHQLGVEFIGHDSVRSD------IEIIALAWDILDKLGIKELNLEINTLGNTNDRSNFQ- 176

Query: 442 DDAENIMKGVLDTIKNSSQDRINTG---------VLLGEGAFYGPK-FEYILKDAIGRDW 491
               N ++   D++   SQ+RI            +   +     P+ F+++ + ++ R  
Sbjct: 177 KSFLNWLEINKDSLDLDSQNRITKNPLRILDSKNIQTKKALENAPRLFDFLSEKSLKRYS 236

Query: 492 QCGT----------------IQVDFNLPSRFNAFYVNSH-------SEKCHPVMIHRAVF 528
                                 +D+   + F                 +   ++      
Sbjct: 237 DLKNQLEVLKIPYVENFNLVRGLDYYTHTAFEITSGALGSQATVCGGGRYDDLIKQMGGP 296

Query: 529 GSIERFIGIMIENF---KGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD 585
            +      I +E      G            +      A  YA +++  L+ H L +E D
Sbjct: 297 NTPAIGFAIGLERLILLAGKELEVPRNTDIYIINQGLIAESYAMDLSRKLRKHDLIVELD 356

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGS----TTTQKVSLLDAIPI 640
               + + + ++ +  K   II+ GD EA++R   IR F         + +S+ D I +
Sbjct: 357 LSGSSFSKQFKKANKLKSKSIIVIGDDEAAKREFLIRLFDQAGKRNKEEVISIEDNIKL 415


>gi|71280601|ref|YP_269467.1| seryl-tRNA synthetase [Colwellia psychrerythraea 34H]
 gi|123632220|sp|Q480Q2|SYS_COLP3 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|71146341|gb|AAZ26814.1| seryl-tRNA synthetase [Colwellia psychrerythraea 34H]
          Length = 426

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/188 (12%), Positives = 64/188 (34%), Gaps = 15/188 (7%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + +  +M     +   Y+E+  P +++      +G    +  ++F       T   
Sbjct: 171 ARLHRAIAQFMLDTHTEEHGYQEMYVPYLVNAASLYGTGQLPKFGEDLF------HTDLS 224

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
            + F+L P +      +    +    +LP+++      +R+E       + GL+R   F 
Sbjct: 225 NKKFSLIPTSEVPLTNLVRDEIVDEDDLPIKMTAHTPCFRSEAGSGGRDIRGLIRQHQFD 284

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG----SDALWDD 443
           + +       E       ++      I +        V+L +              +W  
Sbjct: 285 KVEMVQIVKPETSMTALDELTRHAEIILEKLELPYRTVQLCSGDVGFSAAKTFDLEVWLP 344

Query: 444 AENIMKGV 451
           A++  + +
Sbjct: 345 AQDTYREI 352


>gi|163942138|ref|YP_001647022.1| alanyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|229135211|ref|ZP_04264010.1| Alanyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
 gi|205829987|sp|A9VI09|SYA_BACWK RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|163864335|gb|ABY45394.1| alanyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|228648253|gb|EEL04289.1| Alanyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
          Length = 880

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 66/161 (40%), Gaps = 15/161 (9%)

Query: 44  NGK-----VCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP 98
           NG+     V +     ++ +++ +     RS  V  H+  H++ +A++ I        G 
Sbjct: 531 NGQNLHKVVVEEGTLTKDAAVKAVIDTKNRSSVVKNHTATHLLHQALKDILGTHVNQAGS 590

Query: 99  -IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAY 157
            +  +   +DF       +DEL +IE+ + E I           + E+A+E+        
Sbjct: 591 LVTSERLRFDFSHFGQVQADELEKIERIVNEKIWESIDVAISQKAIEEAKEMGAMALFGE 650

Query: 158 KVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
           K          + V + + G++  +LC G HV +T  +  F
Sbjct: 651 KY--------GDVVRVVQVGDYSLELCGGCHVDNTASIGIF 683


>gi|317120858|ref|YP_004100861.1| seryl-tRNA synthetase [Thermaerobacter marianensis DSM 12885]
 gi|315590838|gb|ADU50134.1| seryl-tRNA synthetase [Thermaerobacter marianensis DSM 12885]
          Length = 425

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 49/335 (14%), Positives = 100/335 (29%), Gaps = 44/335 (13%)

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
            +L Q+E+             +       A EL  + ++     + +SI   E      +
Sbjct: 40  QDLQQLEELRARRNQTSEAIGRLRREGADASELIAAMRQ-----VGDSIKELEERVRGLE 94

Query: 177 GEWFD-LCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
            E  D L R P +      +       V    W             GT  +       + 
Sbjct: 95  QEIQDRLLRIPMIPDPDVPEGDDADDNVEVRRW-------------GTPPSFDFTPKAHW 141

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI--KDDYEE 293
                    D  + A+                +  +G ++ + LI +M      +  Y E
Sbjct: 142 ELGPALGLLDFERAAKITGARFT--------VFRGRGARLVRALIQFMLDLHTQEHGYTE 193

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           +  P ++ +     +G    +  + F V  +D        F L P        ++   + 
Sbjct: 194 VLPPFLVHRQSMVGTGQLPKFEEDAFRVADSD--------FFLVPTAEVPVTNLYRDEIL 245

Query: 354 SYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
              +LP+    +   +R E   +     GL+R   F + +   F   ++   E  K+   
Sbjct: 246 DGAQLPIYHVAYTPCFRAEAGSAGRDTRGLIRQHQFDKVELVKFVHPDRSAEEHEKLVAD 305

Query: 411 IISIYKDFGFEKIMVKLSTRPEKRV----GSDALW 441
             ++ +  G    +V + T              +W
Sbjct: 306 AEAVLQRLGLPYRLVLICTGDMGFAQAKQYDLEVW 340


>gi|315142782|gb|ADT80966.1| glutamyl- and prolyl-tRNA synthetase [Promyrmekiaphila sp.
           JEB-2010]
          Length = 148

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 53/143 (37%), Gaps = 19/143 (13%)

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           GA +    E  +  A GR  Q  T   +  N    F   + +  + +     +++  +G 
Sbjct: 9   GADFTTTVEAYVP-ANGRAIQGATSHHLGQNFSKMFEIVFEHPDTGEKQ--YVYQNSWGL 65

Query: 531 IERFIGIMIENFKGN----LPLWLSPIQAIVTTITSSA----------VEYAQEIANLLK 576
             R IG+ +     N    LP  ++P Q ++     +A           +  + +   L+
Sbjct: 66  SSRSIGVAVMVHGDNSGLVLPPRVAPHQVVIVPCGVTANLSESDKKVLADKCEALEKELR 125

Query: 577 SHHLSIETDFR-NETINYKIREH 598
              + ++ D+R N +  +K    
Sbjct: 126 ETSVRVKGDYRENYSPGWKFNHW 148


>gi|312876134|ref|ZP_07736122.1| seryl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
 gi|311797120|gb|EFR13461.1| seryl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
          Length = 420

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 67/195 (34%), Gaps = 18/195 (9%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRRKIKD--D 290
            + + E + H ++   + +          GS   F+   G ++ + LI++M     +   
Sbjct: 130 RVPDFEVKPHWEIGMSLGILDFERASKVSGSRFTFYRGLGARLERALINFMLDLHIEKHG 189

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH 350
           Y EI  P ++ +     +G    +  + F              + L P            
Sbjct: 190 YTEIFPPFLVARKSMIGTGQLPKFEEDAFKTTD---------DYFLIPTAEVPVTNYHRE 240

Query: 351 GLKSYRELPVRLAEFGSVYRNE---PSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
            +    +LP++   + + +R E         GL+R   F + +   F   E  ++E  K+
Sbjct: 241 EILKEEDLPIKYVAYSACFRAEAGAAGKDTRGLIRQHQFNKVELVKFAKPEDSYDELEKL 300

Query: 408 HNLIISIYKDFGFEK 422
                 + K+ G   
Sbjct: 301 TADAEDVLKELGLPY 315


>gi|261879263|ref|ZP_06005690.1| serine-tRNA ligase [Prevotella bergensis DSM 17361]
 gi|270334095|gb|EFA44881.1| serine-tRNA ligase [Prevotella bergensis DSM 17361]
          Length = 430

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/245 (13%), Positives = 78/245 (31%), Gaps = 24/245 (9%)

Query: 210 GDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWH 269
            D+   ++ +  GT  +  +    +   L++    D     +           +G   + 
Sbjct: 120 KDAADNVVVKEGGTVPDLGENALCHWDLLKKYNLVDFDLGVKVTG--------AGFPIYM 171

Query: 270 RKGWKIFQTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTI 328
            K  +  + L ++ +    K  Y E+  P V+++           Y       K      
Sbjct: 172 GKMARFQRALEAFFLDEARKSGYLEVQPPYVVNE--------ASGYGTGQLPDKEGQMYH 223

Query: 329 KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRG 385
            +L    L P        +F   +   +ELP++   + + +R E       + GL R+  
Sbjct: 224 VNLDELYLIPTAEVPVTNIFRDEILDEKELPIKRCAYSACFRREAGSYGKDVRGLNRLHQ 283

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALW 441
           F + +     T +   +   ++ N +  + K       ++ L                +W
Sbjct: 284 FDKVEIVRIDTPDHSNDSLSEMLNHVEGLLKKLELPYHILLLCGGDMSFTSAICYDFEVW 343

Query: 442 DDAEN 446
             A+ 
Sbjct: 344 SAAQK 348


>gi|145509547|ref|XP_001440712.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124407940|emb|CAK73315.1| unnamed protein product [Paramecium tetraurelia]
          Length = 451

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 49/311 (15%), Positives = 106/311 (34%), Gaps = 53/311 (17%)

Query: 272 GWKIFQTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G  + Q L+SY ++   +  Y  + TP  + +    ++     +   ++ V    D    
Sbjct: 181 GLLLNQALVSYGIQFLNQRGYTPVQTPFFMKKTCMAETAQLSDFDDQLYKVTGNPDD--- 237

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
                L   +     A++       ++LP++     + +R E       + G+ RV  F 
Sbjct: 238 -EDLYLIATSEQPISAMYRKEWLEPKDLPIKYGGSSTCFRKEAGAYGKDVWGIFRVHQFE 296

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENI 447
           + +  V C+ E+ +    ++        K       +V                    NI
Sbjct: 297 KIEQFVICSPEESWKFHDEMITAGQDFVKSLELPYRVV--------------------NI 336

Query: 448 MKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFN---LPS 504
           + G L+       D         E  F G K +Y       R+ Q  +  +D+    L  
Sbjct: 337 VSGALNDAAAKKYDL--------EAWFPGYK-DY-------RELQSCSNCLDYQSRALEI 380

Query: 505 RFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTT-ITSS 563
           RF A    +  ++   V +  A   + ER +  ++EN++    +    +  ++   +   
Sbjct: 381 RFGAKK--TDEKEKKYVHMLNATLCATERTLCCILENYQTETGV---KVPVVLQPFVGKD 435

Query: 564 AVEYAQEIANL 574
            + Y + +   
Sbjct: 436 FIPYVKPLPKK 446


>gi|320165203|gb|EFW42102.1| glycyl-tRNA synthetase [Capsaspora owczarzaki ATCC 30864]
          Length = 636

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 53/378 (14%), Positives = 114/378 (30%), Gaps = 32/378 (8%)

Query: 282 YMRRKIKDDY---EEINTPQVLDQHLWQQSGHWDS-YRANMFAVKCADDTIKDLRTFALK 337
           +   K+ +      E  T  + +      S         N   V+ A       R   L+
Sbjct: 262 FFEEKLMNGMFPTSEFGTDILNEAATVASSSIAQKPTPTNADQVRQAFAASIAPRLTYLR 321

Query: 338 PMNCPGHVA-VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCT 396
           P    G      N    +  +LP  +A+ G  +RNE   + H + R R F Q +   F  
Sbjct: 322 PETAQGIFMQTTNTSNANILKLPFGIAQIGKAFRNEI-DAQHFIFRSREFEQMELEFFIP 380

Query: 397 K-EQMFNECLKIHNLIISIYKDFGFEKIMVK---LSTRPEKRVGSDALWDDAENIMKGVL 452
             +        +++              +V+             +    +      +G L
Sbjct: 381 PGDHEPWLQYWVNSRTQWWRSLLRNPDDIVQLPIPKRDLAHYARACVDLEYNFPWGRGEL 440

Query: 453 DTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVN 512
           + +       ++     G GA         +  A         +       +R     + 
Sbjct: 441 EGVAARGSHDLDAH-EAGSGAN------LRVPGAQPGSVVVPHVIEPSAGLTRGVLAVLC 493

Query: 513 SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSA--VEYAQE 570
               +  P     +   S +R +  +           L+P +A +  + +    +E A+ 
Sbjct: 494 DALHEVGPGDPRYSDKSSEQRLVLAL--------HPRLAPYKAALLPVVAKEPLMEAARN 545

Query: 571 IANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQ 630
           +   L +            +I  + +       P + +  D E     I +R   ++ ++
Sbjct: 546 MEERLVNEFGLAVIYDDARSIGKRYQRQDELGTP-LCVAFDSE----GITVRNRDTSKSE 600

Query: 631 KVSLLDAIPILTKESLPP 648
           ++S  DAI ++   +  P
Sbjct: 601 RMSEEDAIQLIVSTARLP 618


>gi|315659988|ref|ZP_07912846.1| serine--tRNA ligase [Staphylococcus lugdunensis M23590]
 gi|315494889|gb|EFU83226.1| serine--tRNA ligase [Staphylococcus lugdunensis M23590]
          Length = 447

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 49/392 (12%), Positives = 128/392 (32%), Gaps = 42/392 (10%)

Query: 78  AHIMAEAVQSIWP-------EVQVAIGPIIEDGFYYDFDKEQPFSSDELAQIEKKMQEII 130
           + +   A+   +        ++++      +         + P   D++ Q++++ +++I
Sbjct: 3   SFLCFAALYINFGKDEYYMLDIRLFRTEPEKVKDKIKLRGDDPKVVDDVLQLDEQRRKLI 62

Query: 131 AR--DSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHV 188
            +  +    +  +S + A +    +     ++ +  +  K      +  E  +  +   +
Sbjct: 63  GQTEEMKANRNKVSEQIAEKKRNQENADDVIKEMRELGDKIKEIDTKLNEIDNKIKDTLI 122

Query: 189 RSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRK 248
           R    +                D     L + +GT  +   E   +   +EE    +  +
Sbjct: 123 RIPNLIHD-------DVPQGASDEENVELKK-WGTPRDFDFEPKAHWDLVEELNMANFER 174

Query: 249 LAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQ 306
            A+      +             G ++ + L++YM  K   +  Y E+  PQ+++     
Sbjct: 175 AAKVSGARFVYLTK--------DGAQLERALMNYMITKHTTQHGYTEMMVPQLVNADTMF 226

Query: 307 QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFG 366
            +G    +  ++F V        +       P         +   +     LP +     
Sbjct: 227 GTGQLPKFEEDLFKV--------EKEGLYTIPTAEVPLTNYYRDEIIQPGVLPEKFTGQS 278

Query: 367 SVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
           + +R+E   +     GL+R+  F + +   F   E  +N   ++     +I ++      
Sbjct: 279 ACFRSEAGSAGRDTRGLIRLHQFDKVEMVRFEKPEDSWNALEEMTTNAEAILEELKLPYR 338

Query: 424 MVKLSTRPEKR----VGSDALWDDAENIMKGV 451
            V L T              +W  + N  K +
Sbjct: 339 RVILCTGDIGFSAAKTYDLEVWLPSYNDYKEI 370


>gi|260768113|ref|ZP_05877047.1| seryl-tRNA synthetase [Vibrio furnissii CIP 102972]
 gi|260616143|gb|EEX41328.1| seryl-tRNA synthetase [Vibrio furnissii CIP 102972]
          Length = 435

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/190 (12%), Positives = 61/190 (32%), Gaps = 11/190 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + +  +M     +   Y E+  P +++      +G    +  ++F  +   +   D
Sbjct: 172 ARLHRAIAQFMLDLHTEQHGYTELYVPYLVNSDTLFGTGQLPKFGKDLFHTEPLAEKASD 231

Query: 331 L--RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRG 385
              R  +L P        +    +    +LP+++      +R+E         GL+R+  
Sbjct: 232 EEPRRLSLIPTAEVPVTNLVRDTITEEADLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQ 291

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALW 441
           F + +       E       ++      + +        V L T              +W
Sbjct: 292 FDKVELVQITKPEDSMAALEELTGHAEKVLQLLELPYRKVVLCTGDMGFGACKTYDLEVW 351

Query: 442 DDAENIMKGV 451
             A+   + +
Sbjct: 352 VPAQKTYREI 361


>gi|269797577|ref|YP_003311477.1| seryl-tRNA synthetase [Veillonella parvula DSM 2008]
 gi|269094206|gb|ACZ24197.1| seryl-tRNA synthetase [Veillonella parvula DSM 2008]
          Length = 426

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/246 (15%), Positives = 81/246 (32%), Gaps = 21/246 (8%)

Query: 219 RIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIF--WHRKGWK 274
            +        ++         + + + H  L   +D+  F+ A   SG  F  +   G +
Sbjct: 112 PVGADEDENVEQRKWGEPRQFDFDVQAHWDLGENLDILDFNRAGKMSGARFTVYKGLGAR 171

Query: 275 IFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           + + LI++M     D   Y E+ TP ++ +     +G    +  +M+ V        +  
Sbjct: 172 LERALINFMVDLHVDKHGYTEMMTPYMVTRETLTGTGQLPKFAEDMYHV--------EGT 223

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQD 389
            + L P             + S  ELP     F + +R E   +     GL+R   F + 
Sbjct: 224 EYFLIPTAEVTLTNYHGGEILSEEELPKYYTAFTACFRAEAGSAGRDTRGLIRQHQFNKV 283

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYK----DFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
           +       E  F E   + +    + +     F    +          +     +W  A+
Sbjct: 284 EMVKLAKPEDSFKELETLTDNAEEVLRLLELPFRVITLCTGDMGFGSAKTYDVEVWMPAQ 343

Query: 446 NIMKGV 451
              + +
Sbjct: 344 GKYREI 349


>gi|89890332|ref|ZP_01201842.1| alanyl-tRNA synthetase [Flavobacteria bacterium BBFL7]
 gi|89517247|gb|EAS19904.1| alanyl-tRNA synthetase [Flavobacteria bacterium BBFL7]
          Length = 873

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 63/163 (38%), Gaps = 11/163 (6%)

Query: 44  NGKVCDLSDPVR---EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPII 100
           NG+   L+  +    EGS + +   + R      H+  H++ +A++ +  +     G ++
Sbjct: 531 NGQTVHLTKNLPKDLEGSHKAVVDANQRHRTSSNHTATHLLHQALRKVLGDHVEQKGSMV 590

Query: 101 EDG-FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKV 159
                 +DF      + ++L ++E  +   I    P  +   +   A     +       
Sbjct: 591 RSASLRFDFSHFAKVTPEQLQEVENFVNARIREQLPLEENRTNTYDAAVEDGAM------ 644

Query: 160 EILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMK 202
             L      + V   + G+ ++LC G HV +T  V  F  + +
Sbjct: 645 -ALFGEKYGDVVRTIKFGKSYELCGGTHVANTADVWHFKIMSE 686


>gi|315142840|gb|ADT80995.1| glutamyl- and prolyl-tRNA synthetase [Myrmekiaphila comstocki]
 gi|315142842|gb|ADT80996.1| glutamyl- and prolyl-tRNA synthetase [Myrmekiaphila comstocki]
          Length = 148

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/143 (16%), Positives = 52/143 (36%), Gaps = 19/143 (13%)

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           GA +    E  +  + GR  Q  T   +  N    F   + +  + +     +++  +G 
Sbjct: 9   GADFTTTVEAYVP-SNGRAIQGATSHHLGQNFSKMFEIVFEHPDTVEKQ--YVYQNSWGL 65

Query: 531 IERFIGIMIENFKGNLPLWL----SPIQAIVTTITSSA----------VEYAQEIANLLK 576
             R IG+ +     N  L L    +P Q ++     +A           +  + +   L+
Sbjct: 66  SSRSIGVAVMVHGDNAGLVLPPRVAPHQVVIVPCGVTANLPESEKKLLAQKCEALEKELR 125

Query: 577 SHHLSIETDFR-NETINYKIREH 598
              + ++ D+R N +  +K    
Sbjct: 126 EASIRVKGDYRENYSPGWKFNHW 148


>gi|299066066|emb|CBJ37247.1| serine tRNA synthetase; also charges selenocystein tRNA with serine
           [Ralstonia solanacearum CMR15]
          Length = 438

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/228 (16%), Positives = 77/228 (33%), Gaps = 18/228 (7%)

Query: 242 EKRDHRKLAREMDL-FHIAEDGSGVIFWHRKG--WKIFQTLISYMRRKI--KDDYEEINT 296
             +DH  L   + L F +A   SG  F   KG   ++ + L  +M      +  Y E   
Sbjct: 135 AVKDHVDLGAGLGLDFDVAAKLSGSRFAVLKGPVARLHRALAQFMLDTHTQEHGYTEAYV 194

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVK------CADDTIKDLRTFALKPMNCPGHVAVFNH 350
           P +++    + +G    +  ++F V          +  + +  F L P        +   
Sbjct: 195 PYIVNAASMRGTGQLPKFEEDLFRVPRKMGQATEAEAGEHVENFYLIPTAEVPLTNLVRD 254

Query: 351 GLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
            + +   LP++ A     +R+E         G++R   F + +       E  F     +
Sbjct: 255 EIVAGDALPMKFAAHSPCFRSEAGSYGKDTRGMIRQHQFDKVEMVQIVQPETSFEALDAM 314

Query: 408 HNLIISIYKD----FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
            +   +I +     F    +          +     +W  A+N  + +
Sbjct: 315 THHAENILRKLELPFRTVVLCTGDMGFGSTKTYDIEVWIPAQNTYREI 362


>gi|296268069|ref|YP_003650701.1| seryl-tRNA synthetase [Thermobispora bispora DSM 43833]
 gi|296090856|gb|ADG86808.1| seryl-tRNA synthetase [Thermobispora bispora DSM 43833]
          Length = 421

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 67/189 (35%), Gaps = 16/189 (8%)

Query: 242 EKRDHRKLAREMDLFHIAE--DGSGVIFWH--RKGWKIFQTLISY-MRRKIKDDYEEINT 296
             RDH +L   +    I      SG  F++    G ++   L++  M + I+  +  +  
Sbjct: 133 TPRDHVELGELLGAIDIDRGAKVSGARFYYLTGAGARLVHGLLTMAMHQAIEAGFTPVIP 192

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P ++       +G   ++ A ++ ++  D          L   +     A     +    
Sbjct: 193 PVLVKPEAMAGTGFLGAHSAEVYRLEADD--------LYLVGTSEVSLAAYHADEILDAA 244

Query: 357 ELPVRLAEFGSVYRNEPS---GSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
            LP+R A + S +R E         G++RV  F + +   FC  E    E L++      
Sbjct: 245 ALPLRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEMFSFCRPEDAHEEHLRLLGWQKQ 304

Query: 414 IYKDFGFEK 422
           +        
Sbjct: 305 MLDKIEVPY 313


>gi|161611255|ref|YP_296799.2| seryl-tRNA synthetase [Ralstonia eutropha JMP134]
          Length = 434

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/224 (17%), Positives = 82/224 (36%), Gaps = 14/224 (6%)

Query: 242 EKRDHRKLAREMDL-FHIAEDGSGVIFWHRKG--WKIFQTLISYMRRK--IKDDYEEINT 296
           E RDH  +  ++ L F  A   +G  F   +G   ++ + L+  M     ++  Y E+  
Sbjct: 135 EVRDHVDVGDKLGLDFDTAAKVTGSRFSMLRGGMARMHRALVQLMLDTHTLEHGYTEMYV 194

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAV--KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
           P +++    + +G    +  ++F V  K   +  +    F L P        +    + +
Sbjct: 195 PYIVNAASMRGTGQLPKFEEDLFKVPRKVGGEDGERTENFYLIPTAEVPLTNIVRDAIVA 254

Query: 355 YRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI 411
             +LP+R       +R+E         G++R   F + +       EQ F+   ++    
Sbjct: 255 GDKLPLRFVAHTPCFRSEAGSYGKDTRGMIRQHQFDKVELVHVVPAEQSFDALEQLTGHA 314

Query: 412 ISIYKD----FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
            +I K     F    +          +     +W  A+N  + +
Sbjct: 315 EAILKKLELPFRTIVLCTGDMGFGSTKTYDLEVWIPAQNTYREI 358


>gi|310657365|ref|YP_003935086.1| seryl-tRNA synthetase [Clostridium sticklandii DSM 519]
 gi|308824143|emb|CBH20181.1| seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with
           serine [Clostridium sticklandii]
          Length = 425

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 46/342 (13%), Positives = 113/342 (33%), Gaps = 29/342 (8%)

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +L +I+  M +   +D  F +     +K  EL +   EA K E  +++ +K      ++G
Sbjct: 10  DLEEIKPLMAKRGEKDFSFEEVIELDDKRIELLQEV-EALKNE--QNVDSKLIPQYKKEG 66

Query: 178 EWFDLCRGPH---VRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRI-YGTAWNTQQELTQ 233
           +  D               +    K ++                 +  G       E+ +
Sbjct: 67  KNTDELMARLKELSEQIKNLDDKVKEVEEDLFQKLLRIPNVPHPDVPTGDTDEDNLEVRK 126

Query: 234 YLYFLEES-EKRDHRKLAREMDLFHIA----EDGSGVIFWHRKGWKIFQTLISYMRRKIK 288
           +        E + H  +  ++++          GS    +   G ++ ++LI++      
Sbjct: 127 WGEPTAFDFEAKAHWDIGTDLNILDFEAAGKITGSRFTLYKDLGARLERSLINFFLNTHT 186

Query: 289 D--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA 346
               Y E+  P + ++  +  +G    +  +MF +        +   + L P        
Sbjct: 187 AEHGYTEVLPPFIANRTSFIGTGQLPKFEEDMFKL--------EGFEYFLVPTAEVPVTN 238

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNE 403
           +  + + +  +L  +   +   +R E   +     GL+R   F + +   F   E  + E
Sbjct: 239 IHQNEIMNGDDLTTKYCAYTPCFRAEAGSAGRDTRGLIRQHQFNKVELVKFTKPEDSYKE 298

Query: 404 CLKIHNLIISIYKDFGFEKIMVKLSTRP----EKRVGSDALW 441
              +      + +  G    +V++ +              +W
Sbjct: 299 LETLTADAEKVLQLLGLPYRVVRICSGDLGFTAAYKYDLEVW 340


>gi|256811168|ref|YP_003128537.1| histidyl-tRNA synthetase [Methanocaldococcus fervens AG86]
 gi|256794368|gb|ACV25037.1| histidyl-tRNA synthetase [Methanocaldococcus fervens AG86]
          Length = 413

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 61/423 (14%), Positives = 127/423 (30%), Gaps = 76/423 (17%)

Query: 268 WHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADD 326
           +  +  K  + + + +R   +   Y+EI TP      L  +              +    
Sbjct: 11  FLPEEMKKRRFIENKLREVFERYGYKEILTPTFESFELIAKKT------GEEIRKQLYVF 64

Query: 327 TIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
                R  AL+P      V  + + LK+ ++ P+RL  F + +R E   +     R R F
Sbjct: 65  KDHGGREMALRPEMTSPVVRFYLNELKNLQK-PLRLYYFANCFRYERPQA----GRFREF 119

Query: 387 TQDDAHVF------CTKEQMFNECLKIHNLIISIYKDFG---------FEKIMVKLSTRP 431
            Q    +          E +      + N+ +      G          +  + +     
Sbjct: 120 WQMGCELIGCENPIADAEVLNLAMDGLININLDFDVHIGHLGVLKGVLEKFNVSEEEEVK 179

Query: 432 EKRVGSDALWDDAENIMKGVL---------DTIKNSSQDRINTGVLLGEGAFYGPK---- 478
            +R+     +D+ E  +  +L         + +K      +   +      F  PK    
Sbjct: 180 IRRLIDKEDYDNLEAYLTQILGEEKKELIFEILKFKGGREVLDELREILKDF--PKSIEA 237

Query: 479 -------FEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRA----V 527
                   E+++ D   +      I    +  +            K              
Sbjct: 238 INNLEEILEFVIHD---KYTINLGIARGLDYYTGMVFEIYGKKGAKQICGGGRYDNLIET 294

Query: 528 FGSIERF---IGIMIENFKGNLP-LWLSPIQAIVTTITSSAVEYAQE--IANLLKSHHLS 581
           FG             +    N+  L +     +V  +        +   IA+ L+     
Sbjct: 295 FGGEPTPAVGFAYGFDRIMMNIDDLEIEEETILVIPVKKDKELIKKSLIIADKLRKSGKI 354

Query: 582 IETDFRNETINYKIREH-------SIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSL 634
           +E     E +  K+R+          KK+   II G+KE +E  + ++   +   + V +
Sbjct: 355 VEF----EIMGRKLRKALDYANSRGFKKV---IIVGEKELNEGKVTLKDMITGEQRLVKI 407

Query: 635 LDA 637
            + 
Sbjct: 408 DEL 410


>gi|311113684|ref|YP_003984906.1| GTP diphosphokinase [Rothia dentocariosa ATCC 17931]
 gi|310945178|gb|ADP41472.1| GTP diphosphokinase [Rothia dentocariosa ATCC 17931]
          Length = 801

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 1/68 (1%)

Query: 3   SDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-IEI 61
            +I +  PDG     P  +T  D A +I   +  + V   +NG++  L   +  GS +EI
Sbjct: 457 DEIVVLTPDGEAIALPAGSTPVDFAYAIHSEVGDRTVGAKVNGRLVPLHTVLPTGSTVEI 516

Query: 62  ITPEDPRS 69
            T ++  +
Sbjct: 517 TTTKNEDA 524


>gi|295706696|ref|YP_003599771.1| alanyl-tRNA synthetase [Bacillus megaterium DSM 319]
 gi|294804355|gb|ADF41421.1| alanyl-tRNA synthetase [Bacillus megaterium DSM 319]
          Length = 877

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/196 (18%), Positives = 76/196 (38%), Gaps = 20/196 (10%)

Query: 12  GSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIEIITPEDP-RSL 70
           G+I++    A   DV ++   +          NG++        +G     T ++  RS 
Sbjct: 511 GTIQSAAGTAEVKDVQKA--PNGQNVQTVAVTNGELV-------KGETYTATLDEENRSA 561

Query: 71  AVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDELAQIEKKMQEI 129
            V  H+  H++ +A++          G  +  D   +DF      + +EL +IE+ + E 
Sbjct: 562 IVKNHTATHLLHQALKDTLGTHVNQAGSLVTADRLRFDFSHFGQVTQEELEKIEQIVNEK 621

Query: 130 IARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHV 188
           I        +  + ++A+ +        K          + V + + G++  +LC G HV
Sbjct: 622 IWDSISVQIENKAIDEAKAMGAMALFGEKY--------GDIVRVVQVGDYSLELCGGCHV 673

Query: 189 RSTGQVKKFFKLMKVA 204
            +T  +  F  + +  
Sbjct: 674 PNTSVIGLFKIVSESG 689


>gi|291522221|emb|CBK80514.1| alanyl-tRNA synthetase [Coprococcus catus GD/7]
          Length = 880

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 61/141 (43%), Gaps = 10/141 (7%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSD 117
           +++   ++ RS     HS  H++ +A++ +        G    +D   +DF      + +
Sbjct: 551 VKLAINKEKRSDTAKNHSATHLLQKALRIVLGSHVEQAGSFNNQDKLRFDFTHFSALTQE 610

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           EL ++E  + E IA+  P L + ++ E A++         K          ++V +   G
Sbjct: 611 ELDRVEDIVNEEIAKGLPVLTKVMNIEDAKKTGAMALFGEKY--------SDDVRVVSMG 662

Query: 178 EW-FDLCRGPHVRSTGQVKKF 197
           ++  +LC G H  +T  +  F
Sbjct: 663 DFSKELCGGTHTDNTASIAAF 683


>gi|254561741|ref|YP_003068836.1| alanyl-tRNA synthetase [Methylobacterium extorquens DM4]
 gi|254269019|emb|CAX24980.1| alanyl-tRNA synthetase [Methylobacterium extorquens DM4]
          Length = 891

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 69/183 (37%), Gaps = 26/183 (14%)

Query: 31  SRSLAKKAVAVAING---KVCDL---SDPVREGS------IEIITPEDPRSLAVIRHSCA 78
              L        + G   K+ DL      V EG+      +E+      R+     HS  
Sbjct: 513 GPGLK-----ARVTGTEKKLGDLFVHHVTVEEGTLAVGAAVELKVDHARRAAIRANHSAT 567

Query: 79  HIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFL 137
           H++ EA++ +  +     G  +  +   +D    +P    EL+++E+    ++ +++P +
Sbjct: 568 HLLHEALRQVLGDHVAQKGSLVAPERLRFDISHPKPIDEAELSRVEEIANAVLLQNAPVV 627

Query: 138 KQYLSHEKARE------LFESKKEAYKVEILESIPAKE--NVTLYRQGEWFDLCRGPHVR 189
            + ++ ++A E        E   +  +V  +      E   V         +LC G HV 
Sbjct: 628 TKLMAVDEAIESGARALFGEKYGDEVRVVSMGRPVDDEGREVEGRLPNFSIELCGGTHVS 687

Query: 190 STG 192
             G
Sbjct: 688 QLG 690


>gi|240139285|ref|YP_002963760.1| alanyl-tRNA synthetase [Methylobacterium extorquens AM1]
 gi|240009257|gb|ACS40483.1| alanyl-tRNA synthetase [Methylobacterium extorquens AM1]
          Length = 891

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 69/183 (37%), Gaps = 26/183 (14%)

Query: 31  SRSLAKKAVAVAING---KVCDL---SDPVREGS------IEIITPEDPRSLAVIRHSCA 78
              L        + G   K+ DL      V EG+      +E+      R+     HS  
Sbjct: 513 GPGLK-----ARVTGTDKKLGDLFVHHVTVEEGTLAVGAAVELKVDHARRAAIRANHSAT 567

Query: 79  HIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFL 137
           H++ EA++ +  +     G  +  +   +D    +P    EL+++E+    ++ +++P +
Sbjct: 568 HLLHEALRQVLGDHVAQKGSLVAPERLRFDISHPKPIDEAELSRVEEIANAVLLQNAPVV 627

Query: 138 KQYLSHEKARE------LFESKKEAYKVEILESIPAKE--NVTLYRQGEWFDLCRGPHVR 189
            + ++ ++A E        E   +  +V  +      E   V         +LC G HV 
Sbjct: 628 TKLMAVDEAIESGARALFGEKYGDEVRVVSMGRPVDDEGREVEGRLPNFSIELCGGTHVS 687

Query: 190 STG 192
             G
Sbjct: 688 QLG 690


>gi|163852018|ref|YP_001640061.1| alanyl-tRNA synthetase [Methylobacterium extorquens PA1]
 gi|205830139|sp|A9W5Y4|SYA_METEP RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|163663623|gb|ABY30990.1| alanyl-tRNA synthetase [Methylobacterium extorquens PA1]
          Length = 891

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 69/183 (37%), Gaps = 26/183 (14%)

Query: 31  SRSLAKKAVAVAING---KVCDL---SDPVREGS------IEIITPEDPRSLAVIRHSCA 78
              L        + G   K+ DL      V EG+      +E+      R+     HS  
Sbjct: 513 GPGLK-----ARVTGTEKKLGDLFVHHVTVEEGTLAVGAAVELKVDHARRAAIRANHSAT 567

Query: 79  HIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFL 137
           H++ EA++ +  +     G  +  +   +D    +P    EL+++E+    ++ +++P +
Sbjct: 568 HLLHEALRQVLGDHVAQKGSLVAPERLRFDISHPKPIDEAELSRVEEIANAVLLQNAPVV 627

Query: 138 KQYLSHEKARE------LFESKKEAYKVEILESIPAKE--NVTLYRQGEWFDLCRGPHVR 189
            + ++ ++A E        E   +  +V  +      E   V         +LC G HV 
Sbjct: 628 TKLMAVDEAIESGARALFGEKYGDEVRVVSMGRPVDDEGREVEGRLPNFSIELCGGTHVS 687

Query: 190 STG 192
             G
Sbjct: 688 QLG 690


>gi|82701157|ref|YP_410723.1| alanyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
 gi|123545319|sp|Q2YD40|SYA_NITMU RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|82409222|gb|ABB73331.1| alanyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
          Length = 862

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 55/131 (41%), Gaps = 9/131 (6%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKM 126
           R+     HS  H+M +A++ +        G +++ +   +DF   QP +  E+ ++E  +
Sbjct: 545 RARTERNHSVTHLMHKALREVLGHHVQQKGSLVDANKTRFDFAHNQPVTDAEIRKVEMLV 604

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGP 186
              I  ++    + ++ E A++         K          + V +   G   +LC G 
Sbjct: 605 NAEILANAATEARMMAIEDAKKSGAMMLFGEKY--------SDEVRVLDIGTSRELCGGT 656

Query: 187 HVRSTGQVKKF 197
           HV+ TG +  F
Sbjct: 657 HVKRTGDIGLF 667


>gi|72381901|ref|YP_291256.1| histidyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A]
 gi|123746309|sp|Q46LS5|SYH_PROMT RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|72001751|gb|AAZ57553.1| histidyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A]
          Length = 426

 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 72/425 (16%), Positives = 142/425 (33%), Gaps = 75/425 (17%)

Query: 276 FQTLISYMRRKIKD-DYEEINTPQVLDQHLWQ--QSGHWDSYRANMFAVKCADDTIKDLR 332
           +Q + S           +EI TP +    L+      + D     M++           R
Sbjct: 21  WQKVESIALEHFSRAGLQEIRTPIIEQTELFSRGIGENTDVVGKEMYSFDDRG-----GR 75

Query: 333 TFALKPMNCPGHVAVFNHGLKS--YRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDD 390
           +  L+P    G  +V    ++     + P RL   G ++R E   +     R R F Q  
Sbjct: 76  SCTLRP---EGTASVARSIVQHGLLNKGPQRLWYRGPMFRYERPQA----GRQRQFHQI- 127

Query: 391 AHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKG 450
              F           ++ ++  +  KD G  ++ +++       +GS+   +  +  +K 
Sbjct: 128 GVEFVGL-ASVISDAEVISIAWNFLKDVGLNELTLEI-----NSLGSNEDRNIFKEELKD 181

Query: 451 VL----DTIKNSSQDRINT-GVLLGEGAFYGPK---------FEYILKDAIGRDWQCGTI 496
            L    D +   SQ RIN   + + +      K          +++  ++  R      +
Sbjct: 182 WLNQRFDLLDEDSQKRINVNPLRILDSKNNSTKELLSEAPSLIDFLSNESKTRFDYLQEL 241

Query: 497 QVDFNLPS-------RFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPL- 548
            V+  +P        R   +Y ++  E     +  +A      R+ G++ E      P  
Sbjct: 242 LVNLKIPYEINYNLVRGLDYYSHTAFEITSDHLGSQATVCGGGRYDGLISELGGPQAPSI 301

Query: 549 -WL------------------SPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE 589
            W                   SP    V      A + A EI   L+S +L IE D+   
Sbjct: 302 GWAIGMERLIILAGDKILQSKSPD-VYVIHKGKKAEQLALEITCQLRSSNLIIELDYSGS 360

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVS---------LLDAIPI 640
           + + + +     +    ++ G+ E S+  + +++       + S         L   I  
Sbjct: 361 SFSKQFKRADKSRAKWALVIGEDEVSKGQLLMKKLRDKQKDEESREYIFSKSDLDQLIKK 420

Query: 641 LTKES 645
           L  E 
Sbjct: 421 LIAEK 425


>gi|332637146|ref|ZP_08416009.1| seryl-tRNA synthetase [Weissella cibaria KACC 11862]
          Length = 427

 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 65/188 (34%), Gaps = 15/188 (7%)

Query: 272 GWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G ++ + + ++M     K+ Y+E+ TP ++       +G +  +  + + V         
Sbjct: 170 GARLERAVYNFMLDEHQKEGYKEMITPYMVKDAAMFGTGQYPKFMEDAYRV-------GT 222

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFT 387
                L P         F   +    +LP  +      +R E   +     GL+R+  F 
Sbjct: 223 NEDMTLIPTAEVPLTNYFREEVIDADKLPYSVTAVSPSFRQEAGSAGRDTRGLIRMHQFN 282

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +   F   EQ +     +     +I +       ++ LST              +W  
Sbjct: 283 KVEMVKFTKPEQSYQALEDMTANAENILQKLNLPYHVITLSTGDMGFSAAKTYDLEVWMP 342

Query: 444 AENIMKGV 451
            ++I + +
Sbjct: 343 EQDIYREI 350


>gi|261886442|ref|ZP_06010481.1| seryl-tRNA synthetase [Campylobacter fetus subsp. venerealis str.
           Azul-94]
          Length = 367

 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/243 (13%), Positives = 84/243 (34%), Gaps = 21/243 (8%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIF 276
           G   N    +   L   E +   ++H +L   +     A      GS        G ++ 
Sbjct: 115 GKDDNDNVCIKTILEPREFNFTPKEHFELGENLGWLDFATGAKLSGSRFTVLRSDGARLS 174

Query: 277 QTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFA 335
           + L+++M        +E +N P +++ +    +G    +  +++ ++  D          
Sbjct: 175 RALVNFMIDFNTARGFELVNVPFLVNSNTLYGTGQLPKFEEDLYKIRDED--------LY 226

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAH 392
           L P +      ++N+ +     LP+++  + + +R E   +     G++R   F + +  
Sbjct: 227 LIPTSEVPVTNIYNNEIIPVENLPIKMTCYSACFRQEAGSAGRDTRGMIRQHQFEKVELV 286

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG----SDALWDDAENIM 448
                E       ++ +    + K+ G     + L +              +W   +   
Sbjct: 287 SISKPEDSAKILDEMVSCASDMLKELGLPHRHMMLCSADLGFGAAKTIDLEVWLPGQGKY 346

Query: 449 KGV 451
           + +
Sbjct: 347 REI 349


>gi|209521126|ref|ZP_03269854.1| histidyl-tRNA synthetase [Burkholderia sp. H160]
 gi|209498436|gb|EDZ98563.1| histidyl-tRNA synthetase [Burkholderia sp. H160]
          Length = 446

 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 64/414 (15%), Positives = 122/414 (29%), Gaps = 79/414 (19%)

Query: 289 DDYEEINTPQVLDQHLWQ--QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA 346
             Y+ I TP V    L+        D     M++   A +         ++P N    V 
Sbjct: 42  YGYQNIRTPIVEHTQLFTRGIGEVTDIVEKEMYSFTDALN----GENLTMRPEN-TAAVV 96

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD--DAHVFCTKEQMFNEC 404
             +       + P RL   G ++R+E         R R F Q   +A  F   +      
Sbjct: 97  RASIEHNMLYDGPKRLWYVGPMFRHERPQR----GRYRQFHQVGVEALGFAGPDADA--- 149

Query: 405 LKIHNLIISIYKDFG--------------FEKIMVKLSTRPEKRVGSDALWDDAENIM-- 448
            +I  +   ++ D G               E+   ++          D L +DA+  +  
Sbjct: 150 -EIIMMCQRLWDDLGLSGIKLEINSLGLAEERAAHRVELIAYLEKHMDVLDEDAKRRLYT 208

Query: 449 ---------KGVLDTIKNSSQDRINTGVLLGEGAFYGP-------KFEYILKDAIGRDWQ 492
                       L  I  ++   I+         F G           + +   + R   
Sbjct: 209 NPLRVLDTKNPALQEIAQNAPKLIDFLGEESRAHFEGLQRLLKANNLPFTINPRLVRGLD 268

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIH-------RAVFGS-IERFIGIMIENFKG 544
              + V   +  +  A    +   +  P++            +   IER + ++ E    
Sbjct: 269 YYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQLGGKPTAACGWAMGIERILELLKEEQ-- 326

Query: 545 NLPLWLSPIQ----AIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE--TINYK--IR 596
                L P        V     +A E A  IA  L+   L +      +  + ++K  ++
Sbjct: 327 -----LVPEDEGCDVYVVHQGDAAREQAFIIAERLRDTGLDVILHCSADGQSASFKSQMK 381

Query: 597 EHSIKKIPIIIICGDKEASERSIGIR-------RFGSTTTQKVSLLDAIPILTK 643
                     ++ G+ E +  ++G++         G    Q V   D    L  
Sbjct: 382 RADASGAAFAVVLGEDEIANGTVGVKPLRDTQANGGKNEQQNVPAEDLTEFLIN 435


>gi|157813072|gb|ABV81281.1| putative bifunctional aminoacyl-tRNA synthetase [Triops
           longicaudatus]
          Length = 134

 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 48/133 (36%), Gaps = 18/133 (13%)

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           G  +    E     A GR  Q  T   +  N    F   Y +  +++   V   +  +G 
Sbjct: 1   GGDFTTTVE-AFISASGRGIQGATSHHLGQNFSKMFEILYEDPETQEKKFVF--QNSWGI 57

Query: 531 IERFIGIMIENFKGNLPLWLSP----IQAIVTT----------ITSSAVEYAQEIANLLK 576
             R IG+MI     N  L L P    +Q ++              S+ +E  +E    L 
Sbjct: 58  TTRTIGVMIMVHGDNQGLVLPPHVACVQVVIVPCGITASMSDADRSALLEACKEYEKTLA 117

Query: 577 SHHLSIETDFRNE 589
              + ++ D+R+ 
Sbjct: 118 EAGIRVKGDYRDN 130


>gi|115438430|ref|XP_001218064.1| glycyl-tRNA synthetase 1 [Aspergillus terreus NIH2624]
 gi|114188879|gb|EAU30579.1| glycyl-tRNA synthetase 1 [Aspergillus terreus NIH2624]
          Length = 656

 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/224 (12%), Positives = 72/224 (32%), Gaps = 31/224 (13%)

Query: 446 NIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSR 505
             +   +D +    ++++   +          K E  ++       +     V     +R
Sbjct: 436 KAVAAAIDALSQELREKLALDLEQQG------KIEVDVEGVGSGKVELDKDIVTIEKRTR 489

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFK-----------GNLPLWLSPIQ 554
                    + + +   +    FG I R    +IE+              + P  ++P +
Sbjct: 490 -------VENVREYTPNVIEPSFG-IGRIFYSLIEHVYWSREGDEARGVLSFPPVIAPTK 541

Query: 555 AIVTTITS--SAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
            ++  +++  S    +Q +   L+   +S   D  + +I  +   +     P  I    +
Sbjct: 542 VLIVPLSTHASFKPLSQRLMMKLRRMGISNRVDDSSASIGKRYARNDELGTPFGITVDFQ 601

Query: 613 EASERSIGIRRFGSTTTQKVSLLDAIPILTK----ESLPPDCQK 652
              + +  +R   ST   + S  + +  L      E    D +K
Sbjct: 602 SVKDNTFTLRDRDSTKQVRASEDEIVQALKSLVEGEETWEDVRK 645



 Score = 39.4 bits (90), Expect = 2.0,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 26/71 (36%), Gaps = 2/71 (2%)

Query: 335 ALKPMNCPGHVAVF-NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
            L+P    G    F      + + +P   A  G  +RNE S    GL+RVR F   +   
Sbjct: 216 YLRPETAQGQFLNFQKLLDFNNQSMPFASASIGKSFRNEISPR-AGLLRVREFLMAEIEH 274

Query: 394 FCTKEQMFNEC 404
           F   E      
Sbjct: 275 FVDPESGKKHS 285


>gi|118475748|ref|YP_892488.1| seryl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40]
 gi|166201245|sp|A0RQK5|SYS_CAMFF RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|118414974|gb|ABK83394.1| seryl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40]
          Length = 414

 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/243 (13%), Positives = 84/243 (34%), Gaps = 21/243 (8%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIF 276
           G   N    +   L   E +   ++H +L   +     A      GS        G ++ 
Sbjct: 115 GKDDNDNVCIKTILEPREFNFTPKEHFELGENLGWLDFATGAKLSGSRFTVLRSDGARLS 174

Query: 277 QTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFA 335
           + L+++M        +E +N P +++ +    +G    +  +++ ++  D          
Sbjct: 175 RALVNFMIDFNTARGFELVNVPFLVNSNTLYGTGQLPKFEEDLYKIRDED--------LY 226

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAH 392
           L P +      ++N+ +     LP+++  + + +R E   +     G++R   F + +  
Sbjct: 227 LIPTSEVPVTNIYNNEIIPVENLPIKMTCYSACFRQEAGSAGRDTRGMIRQHQFEKVELV 286

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG----SDALWDDAENIM 448
                E       ++ +    + K+ G     + L +              +W   +   
Sbjct: 287 SISKPEDSAKILDEMVSCASDMLKELGLPHRHMMLCSADLGFGAAKTIDLEVWLPGQGKY 346

Query: 449 KGV 451
           + +
Sbjct: 347 REI 349


>gi|90962086|ref|YP_536002.1| alanyl-tRNA synthetase [Lactobacillus salivarius UCC118]
 gi|122448814|sp|Q1WT32|SYA_LACS1 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|90821280|gb|ABD99919.1| Alanyl-tRNA synthetase [Lactobacillus salivarius UCC118]
          Length = 880

 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/133 (16%), Positives = 53/133 (39%), Gaps = 10/133 (7%)

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPIIEDGF-YYDFDKEQPFSSDELAQIEKKMQEIIAR 132
            H+  H++ +A++ +        G ++E  +  +DF      ++++L +IE  +   I  
Sbjct: 567 NHTATHLLDQALRDVLGSHTHQAGSLVEPTYLRFDFTNLGSVTAEDLKKIEDIVNAKIWE 626

Query: 133 DSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRST 191
           +          E A ++        K          + V + + G++  + C G HV +T
Sbjct: 627 NIQVETVVTDKESAEKMGAIALFGDKY--------GDTVRVVKVGDYSMEFCGGTHVANT 678

Query: 192 GQVKKFFKLMKVA 204
            ++  F  + +  
Sbjct: 679 NEIGLFKIVSESG 691


>gi|150387877|ref|YP_001317926.1| seryl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
 gi|166987307|sp|A6TJ99|SYS_ALKMQ RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|149947739|gb|ABR46267.1| seryl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
          Length = 426

 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/236 (16%), Positives = 86/236 (36%), Gaps = 22/236 (9%)

Query: 220 IYGTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDL--FHIAEDGSGVIFWHRKGW--K 274
             G   +   E+  +    + S E + H ++   + +  F  A   +G  F   +G   +
Sbjct: 113 PQGDTDDDNIEVRTWGEPTQFSFEPKPHWEVGVNLGILDFEAASKVTGSRFTLYRGMAAR 172

Query: 275 IFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           + + LIS+M     D   Y E+  P ++++     +G    +  + F +          +
Sbjct: 173 LERALISFMLDLHTDEHGYTELLPPFMVNRASMIGTGQLPKFEEDAFKI--------PQK 224

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQD 389
            + L P        ++   +    +LP++   +   +R+E   +     GL+R   F + 
Sbjct: 225 DYFLVPTAEVPVTNIYRDDIIEGDQLPIKYVAYTPCFRSEAGSAGRDTRGLIRQHQFNKV 284

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALW 441
           +   F   E  + E  K+ N    + +  G    +V++ T              +W
Sbjct: 285 ELVKFVRPEDSYEELEKLTNNAEKVLQLLGLPYRIVRICTGDLGFTAAFKYDIEVW 340


>gi|118475098|ref|YP_892193.1| alanyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40]
 gi|205830013|sp|A0RPR0|SYA_CAMFF RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|118414324|gb|ABK82744.1| alanyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40]
          Length = 845

 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 56/132 (42%), Gaps = 9/132 (6%)

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIAR 132
            HS  H++  A++++        G  +E D   +DF   +P + +EL +IE  + E I +
Sbjct: 551 HHSATHLLQAALRNVLGAHIAQAGSSVEADKLRFDFSHPKPVTKEELEKIENFVNEAILK 610

Query: 133 DSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGPHVRSTG 192
            +P   + +  + A++         K          + V +   G   +LC G HV +  
Sbjct: 611 GAPAKIEIMDIQNAKKSGAIALFGEKY--------ADKVRVLTLGPSKELCGGTHVENLN 662

Query: 193 QVKKFFKLMKVA 204
           ++  FF + +  
Sbjct: 663 EIGSFFIVRESG 674


>gi|227552625|ref|ZP_03982674.1| histidine--tRNA ligase [Enterococcus faecium TX1330]
 gi|257896962|ref|ZP_05676615.1| histidyl-tRNA synthetase [Enterococcus faecium Com12]
 gi|293378682|ref|ZP_06624841.1| histidine--tRNA ligase [Enterococcus faecium PC4.1]
 gi|227178251|gb|EEI59223.1| histidine--tRNA ligase [Enterococcus faecium TX1330]
 gi|257833527|gb|EEV59948.1| histidyl-tRNA synthetase [Enterococcus faecium Com12]
 gi|292642722|gb|EFF60873.1| histidine--tRNA ligase [Enterococcus faecium PC4.1]
          Length = 430

 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 57/436 (13%), Positives = 126/436 (28%), Gaps = 72/436 (16%)

Query: 265 VIFWHRKGW--------KIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
           + F   KG         + +Q +    R   +D  Y EI TP       ++         
Sbjct: 1   MSFQRPKGTNDILPGESEKWQFVEETARLLFRDYQYNEIRTPIF---EHYEVISRSVGDT 57

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-----YRELPVRLAEFGSVYR 370
            ++ + +  D   K  R   L+P    G   +    ++          P +    G ++R
Sbjct: 58  TDIVSKEMYDFYDKGERHVTLRP---EGTAPIVRSFVEHKLFGPEYAKPFKTFYMGPMFR 114

Query: 371 NEPSGSLHGLMRVRGFTQ---------DDAHVFCTKEQMFNECLKI-HNLIISIYKDFGF 420
            E         R+R F Q         + A    +     +   ++    I  +    G 
Sbjct: 115 YERPQK----GRLRQFHQIGVEAFGSENPATDVESMVMALDFFKQLGITQIRLVINSLGD 170

Query: 421 EKIMVKLSTRPEKRV--GSDALWDDAENIMKG----VLDTIKNSSQDR-------INTGV 467
           +             +      L +D++  +      VLD+     Q         ++   
Sbjct: 171 KDTRQAYRQALIDYLLPFEAELSEDSKRRLHENPLRVLDSKDKRDQKFVADAPSILDYLS 230

Query: 468 LLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH------------- 514
              +  F        + DA+   ++  +  V          F + S              
Sbjct: 231 EPAQKHFDTV---VSMLDALAVPYEIDSNMVRGLDYYTHTIFEIMSDAPKMGAQATICAG 287

Query: 515 -------SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEY 567
                   E   P          IER +  +    +  +    + + A V  +       
Sbjct: 288 GRYDNLVEELGGPSTPGFGFAMGIERLL--LTMEAEEVVIPAFNELDAYVVALGDETNIE 345

Query: 568 AQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGST 627
           A ++   +++   S + DF N     + +        ++++ G+ E + ++I ++   S 
Sbjct: 346 ALKVVQAIRNFGFSADRDFMNRKAKAQFKTADKANAKLVLVIGEDELASQTINVKAMASR 405

Query: 628 TTQKVSLLDAIPILTK 643
             +   L +      +
Sbjct: 406 KEKSFPLEEIYEHFDE 421


>gi|227522981|ref|ZP_03953030.1| seryl-tRNA synthetase [Lactobacillus hilgardii ATCC 8290]
 gi|227089799|gb|EEI25111.1| seryl-tRNA synthetase [Lactobacillus hilgardii ATCC 8290]
          Length = 427

 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/222 (13%), Positives = 78/222 (35%), Gaps = 18/222 (8%)

Query: 242 EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLIS-YMRRKIKDDYEEINT 296
           + + H  +   + +          GS  +++   G  + + + + Y+ +  +  Y+E+  
Sbjct: 136 KPKHHWDIGENLGILDFERAAKVSGSRFVYYMGDGALLERAVYNFYLDQNTEASYQEVIP 195

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +++      +G +  +      ++             + P      V  + + +    
Sbjct: 196 PYMVNGASMYGTGQFPKF------LESKAGYEITGTDLTMIPTAEVPLVNYYRNEIIPEE 249

Query: 357 ELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           +LPV        +R+E   +     GL+R+  F + +   F   E  ++   +I +    
Sbjct: 250 KLPVSFTALSPAFRSEAGSAGRDTKGLIRLHQFNKVEMVKFTKPEDSWDALEQITHQAED 309

Query: 414 IYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
             K  G    ++ L+T              +W  A++  + +
Sbjct: 310 NLKKLGLAYHVITLTTSDMSFTAAMTHDLEVWFPAQDKYREI 351


>gi|255656824|ref|ZP_05402233.1| seryl-tRNA synthetase [Clostridium difficile QCD-23m63]
 gi|296452344|ref|ZP_06894047.1| serine--tRNA ligase [Clostridium difficile NAP08]
 gi|296877695|ref|ZP_06901723.1| serine--tRNA ligase [Clostridium difficile NAP07]
 gi|296258845|gb|EFH05737.1| serine--tRNA ligase [Clostridium difficile NAP08]
 gi|296431317|gb|EFH17136.1| serine--tRNA ligase [Clostridium difficile NAP07]
          Length = 423

 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/236 (14%), Positives = 87/236 (36%), Gaps = 22/236 (9%)

Query: 220 IYGTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWK 274
             G   +   E+  +    +   E + H ++  E+ +          GS    +   G +
Sbjct: 113 PQGETDDDNVEVRSWGETTKFDFESKAHWEIGTELGILDFETASKITGSRFTLYKGLGAR 172

Query: 275 IFQTLISYMRRKIK--DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           + + L+++        + Y E+  P + +++ +  +G    +  +MF ++  D       
Sbjct: 173 LERALLNFYLDTNTKVNGYTEVIPPFMANRNSFLGTGQLPKFEEDMFKIEGLD------- 225

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQD 389
            + + P +      +  + +  + +LP+    +   +R+E   +     GL+R   F + 
Sbjct: 226 -YFMIPTSEVPLTNIHANEILKFEQLPINYTAYTPCFRSEAGSAGRDTRGLVRQHQFNKV 284

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP----EKRVGSDALW 441
           +       E+ +NE  K+ N   ++ +       +VK+ T              +W
Sbjct: 285 EMVKIVAPEESYNELEKLTNNAETMLQLLNLPYRVVKICTGDLGFTASFKYDVEVW 340


>gi|225023233|ref|ZP_03712425.1| hypothetical protein EIKCOROL_00085 [Eikenella corrodens ATCC
           23834]
 gi|224944057|gb|EEG25266.1| hypothetical protein EIKCOROL_00085 [Eikenella corrodens ATCC
           23834]
          Length = 873

 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/165 (23%), Positives = 67/165 (40%), Gaps = 14/165 (8%)

Query: 36  KKAVAVAINGKVCDLSDPVREG-SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQV 94
           K AV     G V      V +  S EI    D R   +  HS  H+M +A++ +      
Sbjct: 525 KAAVHGQF-GAVVSGRLKVGDAVSAEI--DNDIRDNIMRNHSVTHLMHKALRDVLGTHVE 581

Query: 95  AIGPIIEDGF-YYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESK 153
             G +       +D    Q  +++E+A++E+++   I  + P   + +S E A++     
Sbjct: 582 QKGSLQNAELTRFDISHPQGINAEEIAEVERRVNAAIIANVPVKVETMSIEDAQKSGAMM 641

Query: 154 KEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
               K          + V +   G++  +LC G HV  TG +  F
Sbjct: 642 LFGEKY--------GDFVRVITMGDYSTELCGGTHVARTGDIGFF 678


>gi|254457173|ref|ZP_05070601.1| seryl-tRNA synthetase [Campylobacterales bacterium GD 1]
 gi|207085965|gb|EDZ63249.1| seryl-tRNA synthetase [Campylobacterales bacterium GD 1]
          Length = 416

 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 69/189 (36%), Gaps = 16/189 (8%)

Query: 271 KGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
            G K+ + LI++M     K  +EE++ P ++++   + +G    +  +++ +        
Sbjct: 169 MGAKLERALINFMLNFNSKRGFEEVSVPALVNRTALEGTGQLPKFEDDLYKI-------- 220

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGF 386
           D +   L P        ++   + S  ELP ++  + S +R E   +     G++R   F
Sbjct: 221 DGQELFLIPTAEVPVTNLYQDEILSADELPKKMTAYTSCFRKEAGAAGRDTRGMIRQHQF 280

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWD 442
            + +       ++      ++      I         +V L T              +W 
Sbjct: 281 HKVELVALSKPDESEVIFDEMVECASDILTALELPHRIVNLCTGDLGFSAAHTTDIEVWL 340

Query: 443 DAENIMKGV 451
             +N  + +
Sbjct: 341 PGQNQYREI 349


>gi|195952750|ref|YP_002121040.1| seryl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
 gi|229890220|sp|B4U7F1|SYS_HYDS0 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|195932362|gb|ACG57062.1| seryl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
          Length = 421

 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 45/245 (18%), Positives = 87/245 (35%), Gaps = 21/245 (8%)

Query: 220 IYGTAWNTQQELTQYLYFLEESE-KRDHRKLAREMDLFHIAEDG--SGVIFWHRKG--WK 274
            YG   N   E+ ++    +     +DH  L          +    SG  F   KG   K
Sbjct: 114 PYGKDENDNVEIKRWGEIPKFDFGIKDHADLGVLRGFIDFDQATAISGSRFSILKGPLAK 173

Query: 275 IFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           + + LI++M     K+ Y+E+  P ++       +G    ++  ++ VK  D        
Sbjct: 174 LERALINFMLEINAKNGYQEMIVPHLVKPQTLVGTGQLPKFQEELYYVKDDD-------- 225

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDD 390
             L P      V VF   +    +LP+ L  +   YR E       + GL+R   F + +
Sbjct: 226 LYLIPTAEVPLVNVFKDTILKEDDLPINLTAYTPCYRREAGSHGKDVKGLIRQHQFDKVE 285

Query: 391 AHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAEN 446
                  +  ++E  ++ +    I +       +V L +              +W  ++N
Sbjct: 286 LVKIVHPDSSYDELERLLSNAEEILQLLELPYRVVALCSGDIGFSASKTYDIEVWIPSQN 345

Query: 447 IMKGV 451
             + +
Sbjct: 346 KYREI 350


>gi|149277075|ref|ZP_01883217.1| serine-tRNA synthetase [Pedobacter sp. BAL39]
 gi|149231952|gb|EDM37329.1| serine-tRNA synthetase [Pedobacter sp. BAL39]
          Length = 423

 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/215 (14%), Positives = 73/215 (33%), Gaps = 20/215 (9%)

Query: 244 RDHRKLAREMDLFHIA----EDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQ 298
             H +L  + D+          G+G   +  KG ++ + LI++       + Y+E+  P 
Sbjct: 141 MPHWELTAKYDIIDFELGTKITGAGFPVYKGKGARLQRALINFFLDHATAEGYKEMQVPH 200

Query: 299 VLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYREL 358
           ++++           +       K        +    L P        ++   +    EL
Sbjct: 201 LVNE--------ASGFGTGQLPDKEGQMYHAGVDNLYLIPTAEVPVTNLYRDVILKEEEL 252

Query: 359 PVRLAEFGSVYRNEPSG---SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIY 415
           PV+   +   +R E       + GL R+  F + +       E+ +    ++   + S+ 
Sbjct: 253 PVKNTAYTPCFRREAGSYGAHVRGLNRLHQFDKVEVVQVVHPEKSYEVLEQMSVYVQSLL 312

Query: 416 KDFGFEKIMVKLSTRPEKR----VGSDALWDDAEN 446
           ++ G    +++L                +W  A+ 
Sbjct: 313 QELGLHYRVLRLCGGDMGFTSAMTYDMEVWSAAQQ 347


>gi|28377821|ref|NP_784713.1| seryl-tRNA synthetase [Lactobacillus plantarum WCFS1]
 gi|308179999|ref|YP_003924127.1| seryl-tRNA synthetase [Lactobacillus plantarum subsp. plantarum
           ST-III]
 gi|38258537|sp|Q88XZ7|SYS2_LACPL RecName: Full=Seryl-tRNA synthetase 2; AltName: Full=Serine--tRNA
           ligase 2; Short=SerRS 2; AltName:
           Full=Seryl-tRNA(Ser/Sec) synthetase 2
 gi|28270654|emb|CAD63560.1| serine--tRNA ligase [Lactobacillus plantarum WCFS1]
 gi|308045490|gb|ADN98033.1| seryl-tRNA synthetase [Lactobacillus plantarum subsp. plantarum
           ST-III]
          Length = 425

 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/178 (17%), Positives = 66/178 (37%), Gaps = 16/178 (8%)

Query: 272 GWKIFQTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G K+ + + ++ + +   + Y E+  P ++       +G +  ++ + F +   D T+  
Sbjct: 170 GAKLERAVYNFFLDQHEAEGYTEVLPPYMVTDESMYGTGQFPKFKEDAFRITTQDLTLI- 228

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFT 387
                  P      V  +   +    +LPV        +R E   +     GL+R+  F 
Sbjct: 229 -------PTAEVPLVNYYRDEVIPAEKLPVYFTALSPAFREEAGSAGRDTKGLIRLHQFN 281

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALW 441
           + +   F   E  ++E  K+ N   S+ K  G    ++ L+T              +W
Sbjct: 282 KVEMVKFTKPEDSWDELEKLTNNAESLLKKLGLPYHVITLTTGDMSFTAAMTHDLEVW 339


>gi|269798241|ref|YP_003312141.1| alanyl-tRNA synthetase [Veillonella parvula DSM 2008]
 gi|269094870|gb|ACZ24861.1| alanyl-tRNA synthetase [Veillonella parvula DSM 2008]
          Length = 871

 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/147 (19%), Positives = 55/147 (37%), Gaps = 8/147 (5%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFS 115
             + +    + R+     H+  H++  A++ +  E     G  +  D   +DF    P +
Sbjct: 538 DDVTLEVDTNRRAAMARNHTATHLLHAALKKVLGEHVNQAGSLVTPDYLRFDFTHFSPVT 597

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
            +EL QIE  + E I + +      +S ++A+          K   +  +          
Sbjct: 598 QEELDQIEVLVNEEILKATDLAIAEMSMDEAKAKGAMALFGDKYGDVVRVVEVP------ 651

Query: 176 QGEWFDLCRGPHVRSTGQVKKFFKLMK 202
            G   +LC G HV +T  +  F    +
Sbjct: 652 -GFSVELCGGSHVGNTAFISSFRLTSE 677


>gi|37525551|ref|NP_928895.1| seryl-tRNA synthetase [Photorhabdus luminescens subsp. laumondii
           TTO1]
 gi|46577174|sp|Q7N6E7|SYS_PHOLL RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|36784979|emb|CAE13897.1| seryl-tRNA synthetase (serine--tRNA ligase) (SERRS) [Photorhabdus
           luminescens subsp. laumondii TTO1]
          Length = 429

 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 62/188 (32%), Gaps = 11/188 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M     +   Y E   P +++      +G    +  ++F  K  ++    
Sbjct: 170 ARLHRALAQFMLNLHTEQHGYLETYVPYLVNHETLYGTGQLPKFGEDLFHTKPLEEEA-- 227

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
              +AL P        +    +    ELP+++      +R+E         GL+R+  F 
Sbjct: 228 ESHYALIPTAEVPITNLVRGDILDENELPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFD 287

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       ++  +    +      + +        V L T              +W  
Sbjct: 288 KVELVQIVHPDESMDALEALTGHAEKVLQLLNLPYRKVLLCTGDMGFSACKTYDLEVWLP 347

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 348 AQNTYREI 355


>gi|332535100|ref|ZP_08410911.1| alanyl-tRNA synthetase [Pseudoalteromonas haloplanktis ANT/505]
 gi|332035475|gb|EGI71972.1| alanyl-tRNA synthetase [Pseudoalteromonas haloplanktis ANT/505]
          Length = 866

 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/145 (20%), Positives = 63/145 (43%), Gaps = 11/145 (7%)

Query: 63  TPEDPRSLAVI-RHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELA 120
           T ++ R  ++   H+  HI+ EA++ +  +     G +++ D   +DF   +  + DEL 
Sbjct: 542 TIDNARRDSIKKNHTATHILHEALRQLLGDHVGQKGSLVQPDRLRFDFSHFEAVTKDELR 601

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW- 179
           +IE+ + + I R+     + ++ + A+          K          + V +   G++ 
Sbjct: 602 EIERVVNDEIRRNFALNTELMAIDDAKAKGAMALFGEKY--------DDEVRVVTIGDYS 653

Query: 180 FDLCRGPHVRSTGQVKKFFKLMKVA 204
            +LC G HV   G +  F  + +  
Sbjct: 654 IELCGGTHVERAGDIGLFKIVSESG 678


>gi|325925139|ref|ZP_08186552.1| histidyl-tRNA synthetase [Xanthomonas perforans 91-118]
 gi|325544393|gb|EGD15763.1| histidyl-tRNA synthetase [Xanthomonas perforans 91-118]
          Length = 482

 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/228 (17%), Positives = 86/228 (37%), Gaps = 18/228 (7%)

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR----INTGVLLGEGAFYG 476
           +KI   ++    +  G++ L   A++ ++ VL+ +K          +N  +  G   + G
Sbjct: 253 DKIDWVVNEVQSRSGGNEDLHAGADD-LREVLELVKALGVPESAYCLNFSIARGLDYYTG 311

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
             +E  L D      Q G+I        R+ +   +    K   V I   +     R   
Sbjct: 312 TVYETTLTDHP----QIGSICSGG----RYESLASHYTKSKLPGVGISIGL----TRLFW 359

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
            + E       +  S +QA+V  +  + ++ A +IA  L+   ++ E     + +  + +
Sbjct: 360 QLRE-AGLIQGIAESSVQAMVALMDETRLDDALDIARRLRIGGINTEVQMEPKKVGKQFQ 418

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
             +   I  +++ GD E +   + ++         V+  +    L  E
Sbjct: 419 YAARAGIRFVVLAGDDELARGVVAVKDLVREQQFDVARDELASTLQVE 466


>gi|301300923|ref|ZP_07207095.1| alanine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
 gi|300851522|gb|EFK79234.1| alanine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
          Length = 880

 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/133 (16%), Positives = 53/133 (39%), Gaps = 10/133 (7%)

Query: 74  RHSCAHIMAEAVQSIWPEVQVAIGPIIEDGF-YYDFDKEQPFSSDELAQIEKKMQEIIAR 132
            H+  H++ +A++ +        G ++E  +  +DF      ++++L +IE  +   I  
Sbjct: 567 NHTATHLLDQALRDVLGSHTHQAGSLVEPTYLRFDFTNLGSVTAEDLKKIEDIVNAKIWE 626

Query: 133 DSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRST 191
           +          E A ++        K          + V + + G++  + C G HV +T
Sbjct: 627 NIQVETVVTDKESAEKMGAIALFGDKY--------GDTVRVVKVGDYSMEFCGGTHVANT 678

Query: 192 GQVKKFFKLMKVA 204
            ++  F  + +  
Sbjct: 679 NEIGLFKIVSESG 691


>gi|282850025|ref|ZP_06259407.1| serine--tRNA ligase [Veillonella parvula ATCC 17745]
 gi|282580214|gb|EFB85615.1| serine--tRNA ligase [Veillonella parvula ATCC 17745]
          Length = 426

 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/246 (15%), Positives = 80/246 (32%), Gaps = 21/246 (8%)

Query: 219 RIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIF--WHRKGWK 274
            +        ++           + + H  L   +D+  F+ A   SG  F  +   G +
Sbjct: 112 PVGADEDENVEQRKWGEPRQFNFDVQAHWDLGESLDILDFNRAGKMSGARFTVYKGLGAR 171

Query: 275 IFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           + + LI++M     D   Y E+ TP ++ +     +G    +  +M+ V        +  
Sbjct: 172 LERALINFMVDLHVDKHGYTEMMTPYMVTRETLTGTGQLPKFAEDMYHV--------EGT 223

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQD 389
            + L P             + S  ELP     F + +R E   +     GL+R   F + 
Sbjct: 224 EYFLIPTAEVTLTNYHGGEILSEEELPKYYTAFTACFRAEAGSAGRDTRGLIRQHQFNKV 283

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYK----DFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
           +       E  F E   + +    + +     F    +          +     +W  A+
Sbjct: 284 EMVKLAKPEDSFKELETLTDNAEEVLRLLELPFRVITLCTGDMGFGSAKTYDVEVWMPAQ 343

Query: 446 NIMKGV 451
              + +
Sbjct: 344 GKYREI 349


>gi|295676902|ref|YP_003605426.1| histidyl-tRNA synthetase [Burkholderia sp. CCGE1002]
 gi|295436745|gb|ADG15915.1| histidyl-tRNA synthetase [Burkholderia sp. CCGE1002]
          Length = 446

 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 63/414 (15%), Positives = 122/414 (29%), Gaps = 79/414 (19%)

Query: 289 DDYEEINTPQVLDQHLWQ--QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA 346
             Y+ I TP V    L+        D     M++   A +         ++P N    V 
Sbjct: 42  YGYQNIRTPIVEHTQLFTRGIGEVTDIVEKEMYSFTDALN----GENLTMRPEN-TAAVV 96

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD--DAHVFCTKEQMFNEC 404
             +       + P RL   G ++R+E         R R F Q   +A  F   +      
Sbjct: 97  RASIEHNMLYDGPKRLWYIGPMFRHERPQR----GRYRQFHQVGVEALGFAGPDADA--- 149

Query: 405 LKIHNLIISIYKDFG--------------FEKIMVKLSTRPEKRVGSDALWDDAENIM-- 448
            +I  +   ++ D G               E+   ++          D L +DA+  +  
Sbjct: 150 -EIIIMCQRLWDDLGLTGIKLEINSLGLAEERAAHRVELIAYLEKHMDVLDEDAKRRLYT 208

Query: 449 ---------KGVLDTIKNSSQDRINTGVLLGEGAFYGP-------KFEYILKDAIGRDWQ 492
                       L  +  ++   I+         F G           + +   + R   
Sbjct: 209 NPLRVLDTKNPALQEVAQNAPKLIDFLGEESRAHFEGLQRLLKANNLPFTINPRLVRGLD 268

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIH-------RAVFGS-IERFIGIMIENFKG 544
              + V   +  +  A    +   +  P++            +   IER + ++ E    
Sbjct: 269 YYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQLGGKPTAACGWAMGIERILELLKEEQ-- 326

Query: 545 NLPLWLSPIQ----AIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE--TINYK--IR 596
                L P        V     +A E A  IA  L+   L +      +  + ++K  ++
Sbjct: 327 -----LVPEDEGCDVYVVHQGDAAREQAFIIAERLRDTGLDVILHCSADGQSASFKSQMK 381

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRF-------GSTTTQKVSLLDAIPILTK 643
                     ++ G+ E +  ++G++         G    Q V   D    L  
Sbjct: 382 RADASGAAFAVVLGEDEIANGTVGVKPLRDTQAHGGKNEQQNVPAEDLTEYLIN 435


>gi|126732587|ref|ZP_01748384.1| seryl-tRNA synthetase [Sagittula stellata E-37]
 gi|126706871|gb|EBA05940.1| seryl-tRNA synthetase [Sagittula stellata E-37]
          Length = 430

 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 44/269 (16%), Positives = 88/269 (32%), Gaps = 25/269 (9%)

Query: 220 IYGTAWNTQQELTQYLYFLEES-EKRDHRKLA--REMDLFHIAEDGSGVIFWHRKG--WK 274
             G   N   E+ ++          ++H +L   +    F  A   SG  F    G   +
Sbjct: 114 PDGADENDNVEIRRWGEPRSFDFTPKEHYELEGVKPGMDFETAAKLSGSRFVLLSGGVAR 173

Query: 275 IFQTLISYMRRKIKDDYE--EINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           I + L  +M     ++++  E  TP ++   +   +G    +  + +             
Sbjct: 174 IHRALAQFMLDTHVEEHDLAETWTPVLVRPEMMYGTGQLPKFGEDSYETTNG-------- 225

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQD 389
            + L P +      + N        LP R A     +R+E   +     G++R   F + 
Sbjct: 226 -WWLIPTSEVTLTNIVNGLTVDEGYLPRRYAAHSQCFRSEAGSAGRDTSGMLRQHQFEKV 284

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAE 445
           +    C  ++   E  ++     +I +  G     V L T              +W   +
Sbjct: 285 EMVTVCHPDKSLEEHERMTRCAEAILEKLGLPYRTVVLCTGDIGFGAQKTHDIEVWLPGQ 344

Query: 446 NIMKGV--LDTIKNSSQDRINTGVLLGEG 472
           N  + +  + T  +    R+N      EG
Sbjct: 345 NTYREISSVSTCGDFQARRMNARYKPTEG 373


>gi|75764283|ref|ZP_00743825.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
 gi|74488228|gb|EAO51902.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
          Length = 224

 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/154 (20%), Positives = 62/154 (40%), Gaps = 17/154 (11%)

Query: 242 EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEEIN 295
           E + H  LA ++ +          GS  +F+   G ++ + LIS+M     D   YEE+ 
Sbjct: 61  EPKPHWDLATDLGILDFERAGKVTGSRFVFYKGAGARLERALISFMLDLHTDEHGYEEVL 120

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
            P ++++     +G    +  + F +        +   + L P        +    + + 
Sbjct: 121 PPYMVNRASMTGTGQLPKFEEDAFRI--------ESEDYFLIPTAEVPVTNMHRDEILNK 172

Query: 356 RELPVRLAEFGSVYRNEPSGS---LHGLMRVRGF 386
            +LP+R A F S +R+E   +     G +R   F
Sbjct: 173 EQLPIRYAAFSSCFRSEAGSAGRDTRGXIRQHQF 206


>gi|222100186|ref|YP_002534754.1| Seryl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
 gi|254783498|sp|B9K8V5|SYS_THENN RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|221572576|gb|ACM23388.1| Seryl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
          Length = 425

 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/244 (15%), Positives = 82/244 (33%), Gaps = 22/244 (9%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIF 276
           G+  +   E+ ++    +       H  L     L          GS     + K  ++ 
Sbjct: 117 GSDESQNVEVRRWGEPRKFDFAPLAHWDLGPAWGLMDFDRASKLSGSRFTVMYGKLARLE 176

Query: 277 QTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           + LI++M         Y E+  P ++ +     +G    +   ++          +    
Sbjct: 177 RALINFMLDVHTREHGYTEVWVPHLVKRETITITGQLPKFEEELYLT--------EKDDL 228

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDA 391
            L P      VA+ +  +   ++LP +   +   YR E       + G++R   F + + 
Sbjct: 229 FLIPTAEVPLVALHSGEILEEKDLPKKYVAYTPCYRREAGSYGKDVRGMIRQHQFDKVEL 288

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENI 447
               T E+ F++  ++     +I +  G    +V L T              +W  + N 
Sbjct: 289 VWITTPERSFDDLEQLVRDAETILQRLGLPYRVVSLCTGDLGFASAKTYDIEVWLPSYNA 348

Query: 448 MKGV 451
            K +
Sbjct: 349 YKEI 352


>gi|72119692|gb|AAZ61955.1| seryl-tRNA synthetase [Ralstonia eutropha JMP134]
          Length = 445

 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/224 (17%), Positives = 82/224 (36%), Gaps = 14/224 (6%)

Query: 242 EKRDHRKLAREMDL-FHIAEDGSGVIFWHRKG--WKIFQTLISYMRRK--IKDDYEEINT 296
           E RDH  +  ++ L F  A   +G  F   +G   ++ + L+  M     ++  Y E+  
Sbjct: 146 EVRDHVDVGDKLGLDFDTAAKVTGSRFSMLRGGMARMHRALVQLMLDTHTLEHGYTEMYV 205

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAV--KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS 354
           P +++    + +G    +  ++F V  K   +  +    F L P        +    + +
Sbjct: 206 PYIVNAASMRGTGQLPKFEEDLFKVPRKVGGEDGERTENFYLIPTAEVPLTNIVRDAIVA 265

Query: 355 YRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLI 411
             +LP+R       +R+E         G++R   F + +       EQ F+   ++    
Sbjct: 266 GDKLPLRFVAHTPCFRSEAGSYGKDTRGMIRQHQFDKVELVHVVPAEQSFDALEQLTGHA 325

Query: 412 ISIYKD----FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
            +I K     F    +          +     +W  A+N  + +
Sbjct: 326 EAILKKLELPFRTIVLCTGDMGFGSTKTYDLEVWIPAQNTYREI 369


>gi|295099596|emb|CBK88685.1| alanyl-tRNA synthetase [Eubacterium cylindroides T2-87]
          Length = 875

 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/142 (21%), Positives = 60/142 (42%), Gaps = 10/142 (7%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGF-YYDFDKEQPFSS 116
           S+     E  R      HSC H++  A++ +  E     G  + D +  +DF+  +  ++
Sbjct: 546 SLHCHVDEAKRKATTANHSCTHLLQSALKEVVGEHIHQAGSYVCDEYLRFDFNHFEKLTT 605

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
            +L +IE  + + IA   P  K+ +  E+A++             L +    + V +   
Sbjct: 606 KQLDEIEDLVNQYIAGAYPVTKEIMDIEEAKK--------SGATALFNEKYGDRVRVVTM 657

Query: 177 GE-WFDLCRGPHVRSTGQVKKF 197
           G+   + C G HV +T Q+   
Sbjct: 658 GDVSKEFCAGCHVENTSQIGLC 679


>gi|260888172|ref|ZP_05899435.1| serine--tRNA ligase [Selenomonas sputigena ATCC 35185]
 gi|260862201|gb|EEX76701.1| serine--tRNA ligase [Selenomonas sputigena ATCC 35185]
          Length = 430

 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/239 (14%), Positives = 77/239 (32%), Gaps = 25/239 (10%)

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLIS 281
           G       E   +     + E  D  + A+               F+   G ++ +  I+
Sbjct: 132 GEPRTFTFEPKAHWDLGADLEILDAERAAKVTGARFT--------FYKGLGARLERACIN 183

Query: 282 YMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPM 339
           +M      K  Y E+  P + ++     +G    +  +MF ++  D        + L P 
Sbjct: 184 FMMDLHATKHGYTEMLAPYIANEASMIGTGQLPKFAEDMFKLEGLD--------YYLVPT 235

Query: 340 NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCT 396
                       +   R+LP R   + + +R E   +     GL+R   F + +   F  
Sbjct: 236 AEVPTTNYHRDEILDGRKLPERYTSYTACFRAEAGSAGRDTRGLIRQHQFNKVELIKFTK 295

Query: 397 KEQMFNECLKIHNLIISIYKDFGFEKI----MVKLSTRPEKRVGSDALWDDAENIMKGV 451
            E+ ++E   + +    + +                +    +     +W  A+N  + +
Sbjct: 296 PEESWDELEGMVDAAEDVLRILEIPYHVVLLCTGDMSFTSAKTYDIEVWMPAQNTYREI 354


>gi|242072850|ref|XP_002446361.1| hypothetical protein SORBIDRAFT_06g014710 [Sorghum bicolor]
 gi|241937544|gb|EES10689.1| hypothetical protein SORBIDRAFT_06g014710 [Sorghum bicolor]
          Length = 684

 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/217 (17%), Positives = 72/217 (33%), Gaps = 39/217 (17%)

Query: 449 KGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILK-DAIGRDWQCGTIQVDFNLPSRFN 507
           K VL++++  ++        L   A    K E   K   +G+D       V  N+  +  
Sbjct: 460 KMVLESLEAMTE-----TEALDMKAVLESKGEVEFKVCTLGKDVTIKKNMVSINIEKK-- 512

Query: 508 AFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENF----KGN----------LPLWLSPI 553
                 H  K  P +I       I R I  + E+      G            P  ++PI
Sbjct: 513 ----KEHQRKFTPSVI--EPSFGIGRIIYCLFEHCFYQRAGKTEDEQLNVFRFPPLVAPI 566

Query: 554 QAIV--TTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGD 611
           +  V            A++I+  L +  +S   D    TI  +        +P+ I    
Sbjct: 567 KCTVFPLVKLEKFEVVAKKISKALTAAGISHIIDMTGNTIGKRYARTDEIGVPLAITV-- 624

Query: 612 KEASERS--IGIRRFGSTTTQKVSLLDAIPILTKESL 646
               + +  + +R   S    +V + + +  + KE  
Sbjct: 625 ----DNTISVTVRDRDSKDQIRVEVDE-VASVVKEVT 656



 Score = 47.5 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 50/267 (18%), Positives = 88/267 (32%), Gaps = 20/267 (7%)

Query: 335 ALKPMNCPGHVAVFNH-GLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
            ++P    G    F      +  +LP   A+ G  +RNE S    GL+RVR FT  +   
Sbjct: 242 YMRPETAQGIFVNFKDLYYYNGNKLPFAAAQIGQAFRNEISPR-QGLLRVREFTLAEIEH 300

Query: 394 FCTKEQMFNECL---KIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKG 450
           F   E   +           ++   +D    +   +L        G+         I + 
Sbjct: 301 FVDPEDKSHPKFGDVSDLEFLMFPREDQMAGRSATRLKLGNAVSEGTVNNETLGYFIGRV 360

Query: 451 VLDTIKNS-SQDRINT-GVLLGEGAFYGP-KFEYILKDAIGRDWQCGTIQVDFNLPSRFN 507
            L   +    +DR+     L  E A Y    ++  ++ + G   +C  I        R +
Sbjct: 361 YLFLTQLGIDKDRLRFRQHLPNEMAHYAADCWDAEIECSYG-WIECVGIADRSAYDLRAH 419

Query: 508 AFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEY 567
           +       E           F        ++I   K  L L     Q +V     +  E 
Sbjct: 420 SDKSGEKLEAH-------EKFAEPREVEKLVITPSKKELGLAFKGNQKMVLESLEAMTET 472

Query: 568 -AQEIANLLKSHHLSIETDFRNETINY 593
            A ++  +L+S     E +F+  T+  
Sbjct: 473 EALDMKAVLESKG---EVEFKVCTLGK 496


>gi|167763155|ref|ZP_02435282.1| hypothetical protein BACSTE_01525 [Bacteroides stercoris ATCC
           43183]
 gi|167698449|gb|EDS15028.1| hypothetical protein BACSTE_01525 [Bacteroides stercoris ATCC
           43183]
          Length = 453

 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/203 (12%), Positives = 72/203 (35%), Gaps = 19/203 (9%)

Query: 442 DDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFN 501
           +++E I+K  L  +   ++  ++  +  G   + G  FE    D        G      N
Sbjct: 268 EESEFILKT-LSALGLKNEIELDLTLARGLNYYTGAIFEVKALDVQIGSITGGGR--YDN 324

Query: 502 LPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM--IENFKGNLPLWLSPIQAIVTT 559
           L   F    V+              +    +R   ++  +E +       ++  Q +   
Sbjct: 325 LTGVFGMAGVSGVG-----------ISFGADRIFDVLNQLELYPKEA---VNGTQLLFIN 370

Query: 560 ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSI 619
                  ++  +   +++  +  E    +  +  ++   + K IP + + G+ E +E  +
Sbjct: 371 FGEKEAAFSMNVLTQVRAAGIRAEIFPDSCKMKKQMGYANSKMIPFVALVGENEMNEGKV 430

Query: 620 GIRRFGSTTTQKVSLLDAIPILT 642
            ++   +   + ++  + +  L+
Sbjct: 431 TLKNMETGEQKLITPEELVSELS 453


>gi|146282637|ref|YP_001172790.1| seryl-tRNA synthetase [Pseudomonas stutzeri A1501]
 gi|166223273|sp|A4VLU7|SYS_PSEU5 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|145570842|gb|ABP79948.1| seryl-tRNA synthetase [Pseudomonas stutzeri A1501]
          Length = 426

 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 76/224 (33%), Gaps = 24/224 (10%)

Query: 244 RDHRKLAREMDL--FHIAEDGSGVIFWHRKG--WKIFQTLISYMRRKIKD--DYEEINTP 297
           +DH  L  +     F  A   SG  F   +G   ++ + L  +M         YEE  TP
Sbjct: 137 QDHVALGEQHGWLDFETAAKLSGARFALMRGPIARLHRALAQFMIDLHTREHGYEEAYTP 196

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++     Q +G    +  ++F +    +       F L P        +    +   ++
Sbjct: 197 YLVQAPALQGTGQLPKFEDDLFKISREGEA-----DFYLIPTAEVSLTNIVAGEILDAKQ 251

Query: 358 LPVRLAEFGSVYRNE--PSGS-LHGLMRVRGFTQDDA-------HVFCTKEQMFNECLKI 407
           LP++       +R+E   SG    G++R   F + +          F   E++     K+
Sbjct: 252 LPLKFVAHTPCFRSEAGASGRDTRGMIRQHQFDKVEMVQIVEPSKSFEALEELTGNAEKV 311

Query: 408 HNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
             L+   Y+        +              +W  +++  + +
Sbjct: 312 LQLLELPYRVLSLCTGDMGFGATKTY---DLEVWVPSQDKYREI 352


>gi|78047428|ref|YP_363603.1| histidyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|123743989|sp|Q3BUG0|SYH_XANC5 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|78035858|emb|CAJ23549.1| histidyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
          Length = 482

 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/228 (17%), Positives = 86/228 (37%), Gaps = 18/228 (7%)

Query: 421 EKIMVKLSTRPEKRVGSDALWDDAENIMKGVLDTIKNSSQDR----INTGVLLGEGAFYG 476
           +KI   ++    +  G++ L   A++ ++ VL+ +K          +N  +  G   + G
Sbjct: 253 DKIDWVVNEVQSRSGGNEDLHAGADD-LREVLELVKALGVPESAYCLNFSIARGLDYYTG 311

Query: 477 PKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG 536
             +E  L D      Q G+I        R+ +   +    K   V I   +     R   
Sbjct: 312 TVYETTLTDHP----QIGSICSGG----RYESLASHYTKSKLPGVGISIGL----TRLFW 359

Query: 537 IMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
            + E       +  S +QA+V  +  + ++ A +IA  L+   ++ E     + +  + +
Sbjct: 360 QLRE-AGLIQGIAESSVQAMVALMDETRLDDALDIARRLRIGGINTEVQMEPKKVGKQFQ 418

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKE 644
             +   I  +++ GD E +   + ++         V+  +    L  E
Sbjct: 419 YAARAGIRFVVLAGDDELARGVVAVKDLVREQQFDVARDELASTLQVE 466


>gi|322368025|ref|ZP_08042594.1| glycyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
 gi|320552041|gb|EFW93686.1| glycyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
          Length = 576

 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 63/182 (34%), Gaps = 26/182 (14%)

Query: 470 GEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFG 529
              AF G   + +  +A G  +            + F+   V    E   P ++  ++  
Sbjct: 390 DRTAFDG---DVVTVEADGDTYAIP------VEKTGFSVEEVKESGEHIVPHVVEPSI-- 438

Query: 530 SIERFIGIMIENFKGN------------LPLWLSPIQAIVTTITSS--AVEYAQEIANLL 575
            I R +  ++++                L   ++P    V  +       E A++IA  L
Sbjct: 439 GIGRVLYTVLDHAYDTDEIEGETRTRLSLDPEIAPTTVGVFPLMDKDGMGETARDIAAEL 498

Query: 576 KSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL 635
           +SH L +  D     I  + R       P  +    +   + ++ +R   ST   +V++ 
Sbjct: 499 RSHGLDVVYDDSGN-IGRRYRRQDEVGTPFCVTVDYEGLEDDTVTLRERDSTEQVRVAVD 557

Query: 636 DA 637
           D 
Sbjct: 558 DL 559



 Score = 56.3 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/243 (15%), Positives = 77/243 (31%), Gaps = 67/243 (27%)

Query: 248 KLAREMDLFHIAEDG----SGVIFWHRKGWKIFQTLISYMRR--KIKDDYEEINTPQVLD 301
           +LA+    F  + +     SG   +  +G  + + +    R   ++++ + EI  P V+ 
Sbjct: 7   ELAKRRGFFFQSSEAYGGVSGFYVYGPQGAALKRNIEDSWRDRFQVQEGHREIEAPTVMP 66

Query: 302 QHLWQQSGHWDSY---------RANMFAVKCADDTIKDLRTFALKPM------------N 340
           + +++ SGH D++                    +   D+      P+            +
Sbjct: 67  EPVFEASGHLDTFDDMLVECPECGESHRADHLIEDNTDIEDAEAMPLSEVGDLIAEYDLH 126

Query: 341 CPG---------------------------------------HVAVFNHGLKSYRELPVR 361
           CP                                         V        +  +LP  
Sbjct: 127 CPSCETPLAGEPVEDFNLMFETDIGPGSGHPGYLRPETAQGIFVEFPRLKEYARNQLPFG 186

Query: 362 LAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFE 421
           + + G+ YRNE S     ++RVR FTQ +   F   E       ++ ++ +++Y      
Sbjct: 187 ITQIGTAYRNEISPR-KSIIRVREFTQAELEHFIDPETDEPPLHRVEDVEVTLYSAVEQN 245

Query: 422 KIM 424
              
Sbjct: 246 DDD 248


>gi|257888147|ref|ZP_05667800.1| histidyl-tRNA synthetase [Enterococcus faecium 1,141,733]
 gi|257899578|ref|ZP_05679231.1| histidyl-tRNA synthetase [Enterococcus faecium Com15]
 gi|293571371|ref|ZP_06682402.1| histidyl-tRNA synthetase [Enterococcus faecium E980]
 gi|257824201|gb|EEV51133.1| histidyl-tRNA synthetase [Enterococcus faecium 1,141,733]
 gi|257837490|gb|EEV62564.1| histidyl-tRNA synthetase [Enterococcus faecium Com15]
 gi|291608587|gb|EFF37878.1| histidyl-tRNA synthetase [Enterococcus faecium E980]
          Length = 430

 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 56/436 (12%), Positives = 126/436 (28%), Gaps = 72/436 (16%)

Query: 265 VIFWHRKGW--------KIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYR 315
           + F   KG         + +Q +    R   +D  Y E+ TP       ++         
Sbjct: 1   MSFQRPKGTNDILPGESEKWQFVEETARLLFRDYQYNEMRTPIF---EHYEVISRSVGDT 57

Query: 316 ANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKS-----YRELPVRLAEFGSVYR 370
            ++ + +  D   K  R   L+P    G   +    ++          P +    G ++R
Sbjct: 58  TDIVSKEMYDFYDKGERHVTLRP---EGTAPIVRSFVEHKLFGPEYAKPFKTFYMGPMFR 114

Query: 371 NEPSGSLHGLMRVRGFTQ---------DDAHVFCTKEQMFNECLKI-HNLIISIYKDFGF 420
            E         R+R F Q         + A    +     +   ++    I  +    G 
Sbjct: 115 YERPQK----GRLRQFHQIGVEAFGSENPATDVESMVMALDFFKQLGITQIRLVINSLGD 170

Query: 421 EKIMVKLSTRPEKRV--GSDALWDDAENIMKG----VLDTIKNSSQDR-------INTGV 467
           +             +      L +D++  +      VLD+     Q         ++   
Sbjct: 171 KDTRQAYRQALIDYLLPFEAELSEDSKRRLHENPLRVLDSKDKRDQKFVADAPSILDYLS 230

Query: 468 LLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSRFNAFYVNSH------------- 514
              +  F        + DA+   ++  +  V          F + S              
Sbjct: 231 EPAQKHFDTV---VSMLDALAVPYEIDSNMVRGLDYYTHTIFEIMSDAPKMGAQATICAG 287

Query: 515 -------SEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEY 567
                   E   P          IER +  +    +  +    + + A V  +       
Sbjct: 288 GRYDNLVEELGGPSTPGFGFAMGIERLL--LTMEAEEVVIPAFNELDAYVVALGDETNIE 345

Query: 568 AQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGST 627
           A ++   +++   S + DF N     + +        ++++ G+ E + ++I ++   S 
Sbjct: 346 ALKVVQAIRNFGFSADRDFMNRKAKAQFKTADKANAKLVLVIGEDELASQTINVKAMASR 405

Query: 628 TTQKVSLLDAIPILTK 643
             +   L +      +
Sbjct: 406 KEKSFPLEEIYEHFDE 421


>gi|256819573|ref|YP_003140852.1| seryl-tRNA synthetase [Capnocytophaga ochracea DSM 7271]
 gi|256581156|gb|ACU92291.1| seryl-tRNA synthetase [Capnocytophaga ochracea DSM 7271]
          Length = 423

 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/214 (15%), Positives = 71/214 (33%), Gaps = 20/214 (9%)

Query: 245 DHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQV 299
            H +LA++ DL          G+G   +  KG K+ + LI+Y + +  +  Y E   P V
Sbjct: 142 PHWELAKKYDLIDFELGVKLTGAGFPVYKGKGAKLQRALITYFLDKNTEAGYNEYQVPHV 201

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           +++           Y       K        +    L P        +F   L +  +LP
Sbjct: 202 VNE--------ASGYGTGQLPDKEGQMYHIGVDNLYLIPTAEVPVTNIFRDTLLNESDLP 253

Query: 360 VRLAEFGSVYRNEPSG---SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +    +   +R E       + GL R+  F + +       ++ +     +   +  I  
Sbjct: 254 ICCTAYTPCFRREAGSYGAHVRGLNRLHQFDKVEIVRIEHPDRSYKALEGMIEHVKGILN 313

Query: 417 DFGFEKIMVKLSTRPEKR----VGSDALWDDAEN 446
           +      +++L                ++  A+ 
Sbjct: 314 ELKLPYHILRLCGGDLGFTSAITYDFEVYSTAQE 347


>gi|261365211|ref|ZP_05978094.1| serine--tRNA ligase [Neisseria mucosa ATCC 25996]
 gi|288566473|gb|EFC88033.1| serine--tRNA ligase [Neisseria mucosa ATCC 25996]
          Length = 431

 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/222 (17%), Positives = 76/222 (34%), Gaps = 14/222 (6%)

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHR-KG--WKIFQTLISYMRRK--IKDDYEEINT 296
           E +DH  L   + L            +   KG   ++ + L  +M     +K  Y E  T
Sbjct: 137 EIKDHVDLGEPLGLDFEGGAKLSGARFTVMKGQIARLHRALAQFMLDTHTLKHGYTEHYT 196

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P ++D    Q +G    +  ++F V    D  K  +     P             + +  
Sbjct: 197 PYIVDDTTLQGTGQLPKFAEDLFHVTRGGDESKKTQYLI--PTAEVTLTNTVADSIVAGS 254

Query: 357 ELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           +LP++L      +R+E       + GL+R   F + +       E+ +    ++     +
Sbjct: 255 DLPLKLTAHSPCFRSEAGAYGKDVRGLIRQHQFDKVEMVQIVHPEKSYEALEEMVGHAEN 314

Query: 414 IYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
           I K       ++ L T              +W  A+N  + +
Sbjct: 315 ILKALELPYRVITLCTGDMGFGATKTYDLEVWVPAQNTYREI 356


>gi|327439656|dbj|BAK16021.1| histidyl-tRNA synthetase [Solibacillus silvestris StLB046]
          Length = 422

 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 64/418 (15%), Positives = 129/418 (30%), Gaps = 70/418 (16%)

Query: 274 KIFQTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           ++ + L    R      Y EI TP      L+Q+         ++   +    T K  R+
Sbjct: 25  RVIRDLCEKYR------YNEIRTPMFESTELFQRG---VGDTTDIVQKEMYTFTDKGNRS 75

Query: 334 FALKPM-NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
             L+P        A   H +    + PV+L   G ++R E         R R F Q    
Sbjct: 76  LTLRPEGTASAVRAYVEHKMFGQADQPVKLYYTGPMFRYER----QQAGRYRQFVQFGVE 131

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEK---IMVKLSTRPEKRVGSDALWDDAENIMK 449
              + +   +   ++  L + +Y   G      ++  L  +  +     AL +    ++ 
Sbjct: 132 AIGSADPAIDA--EVMALAMDVYTTLGLSDLKLVINSLGDKDTRDAHRSALIEHFTPVVG 189

Query: 450 GVLDTIKNSSQDRIN--------------------TGVLLGEGAFYGPKFEYILKDAIGR 489
            +    ++  +                        T  L    A Y  K      D +G 
Sbjct: 190 ELCSDCQSRLEKNPLRILDCKVDAKHPAMATAPALTNYLTDSSAEYFTKV-KQYLDVLGI 248

Query: 490 DWQCGTIQVDFNLPSRFNAFYVNSHSEK--------------------CHPVMIHRAVFG 529
            ++     V         AF +    E                       P         
Sbjct: 249 SYEVDPNLVRGLDYYNHTAFEIMITGEGFGSITTLCGGGRYNGLVEDIGGPESPGIGFAL 308

Query: 530 SIERFIGIM----IENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD 585
           SIER +  +    IE   GN        +  V  +   A   A E+ +  ++  +S + D
Sbjct: 309 SIERLLLALEAKNIELATGNNL------EMYVVAMGEEAKLKAVELVSSFRAKGISADMD 362

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           + +  +  +++         +I+ G+ E  E+++ ++   +    KV     +  + +
Sbjct: 363 YLDRKMKAQMKAADRANAKFVIVLGESELEEQAVNVKTMETGDQTKVEFGQLVQYVLE 420


>gi|300173446|ref|YP_003772612.1| histidyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811]
 gi|299887825|emb|CBL91793.1| histidyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811]
          Length = 432

 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 66/416 (15%), Positives = 140/416 (33%), Gaps = 60/416 (14%)

Query: 269 HRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
                  +Q + S  R    D +++EI TP   +  ++ +S       +++   +  D  
Sbjct: 16  LPDNTLQWQHVESTARLLFGDYNFKEIRTPLFENFDVFSRS---AGDTSDVVTKEMYDFH 72

Query: 328 IKDLRTFALKPMNCPGHVAVF--NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRG 385
            K  R  AL+P    G V  +  N       + P ++   G ++R E   +     R R 
Sbjct: 73  DKGDRHIALRPEGTAGVVRAYVENKLFGPEFDKPYKVYYMGPMFRYERPQA----GRFRQ 128

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA- 444
           F Q     F +K    +   +I  + + +++  G + +  K++        S   +  A 
Sbjct: 129 FHQIGVEAFGSKSPALDV--EIIAMAVDLFQTLGLKNL--KVAINTLGDKSSRVAYRQAL 184

Query: 445 ENIMKGVLDTIKNSSQDRIN-------TGVLLGEGAF--YGPKF-EYILKDAIGRDWQCG 494
            + +K   + +   SQ+R+              +  F    P   +Y+ ++A     Q  
Sbjct: 185 IDYLKPHFNELSTDSQNRLEQNPLRVLDSKDPRDKIFVADAPSILDYLSEEATKHWQQVQ 244

Query: 495 TI----------------QVDFNLPSRFNAFYVNSH-----------------SEKCHPV 521
           T+                 +D+   + F    ++ +                 +E   P 
Sbjct: 245 TMLRALNINYDIDATMVRGLDYYNDTIFEIMTIDDNLKGAATIAGGGRYSGLVAEFGGPE 304

Query: 522 MIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLS 581
                    +ER IG++  N + + P+    +   V  I       A +    ++S    
Sbjct: 305 TPGVGFGIGMERLIGLL--NAQNSAPIVDDKLDFYVVNIGDGTDVVAMQTVQAIRSFGYV 362

Query: 582 IETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
            E D+   +   + +         ++  GD+E    +  ++   +   Q V L D 
Sbjct: 363 AERDYLGRSAKAQFKSADRNHSKYVVTIGDQELVNNTANVKDMATGYQQTVKLADL 418


>gi|294102019|ref|YP_003553877.1| alanyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
 gi|293616999|gb|ADE57153.1| alanyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
          Length = 881

 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 63/151 (41%), Gaps = 11/151 (7%)

Query: 50  LSDPVREG-SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGF-YYD 107
           L   + EG ++     ++ R      H+  H++ EA+  +        G ++ +    +D
Sbjct: 540 LEGVLTEGLAVHASVDKEKRESIRRNHTATHLLHEALSQVLGSHVRQAGSLVNEALLRFD 599

Query: 108 FDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPA 167
           F   +  + +++A +E  +   I ++ P        E+ARE+          + L     
Sbjct: 600 FTHFESMTREQIAAVEDMVNRQILKNIPLETIESDLEQAREMG--------AKALFDEKY 651

Query: 168 KENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
            + V + R  ++  +LC G HV +TG +  F
Sbjct: 652 GDIVRVVRIKDFSTELCGGLHVDATGDIGAF 682


>gi|226366292|ref|YP_002784075.1| histidyl-tRNA synthetase [Rhodococcus opacus B4]
 gi|254782341|sp|C1B4E1|SYH_RHOOB RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|226244782|dbj|BAH55130.1| histidyl-tRNA synthetase [Rhodococcus opacus B4]
          Length = 423

 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/207 (14%), Positives = 70/207 (33%), Gaps = 19/207 (9%)

Query: 438 DALWDDAENIMKGVLDTIKNSSQDRI-NTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
           D L D A+     VL  +       + N  ++ G   +    FE+ + D +G        
Sbjct: 227 DHLSDTAKAHFDEVLAHLDALGVPYVVNPRMVRGLDYYTKTTFEF-VHDGLG-------A 278

Query: 497 QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI 556
           Q       R++        +    +       G     + +  E   G      +  +  
Sbjct: 279 QSGIGGGGRYDGLMAQLGGQPLSGIGF---GLGVDRTVLALAAE---GKTAGSTARCEVF 332

Query: 557 VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK--IREHSIKKIPIIIICGDKEA 614
              +   A      IA  L++  + ++  + N     K  ++        + ++ GD++ 
Sbjct: 333 GVPLGEEAKAKLVVIAQQLRAQGIRVDLAYGNR--GVKGAMKAADRSGAALALVLGDRDI 390

Query: 615 SERSIGIRRFGSTTTQKVSLLDAIPIL 641
           +E ++GI+   +   + VS  D +  +
Sbjct: 391 AEGTVGIKNLATGDQESVSSADVLARV 417


>gi|149911059|ref|ZP_01899687.1| alanyl-tRNA synthetase [Moritella sp. PE36]
 gi|149805885|gb|EDM65873.1| alanyl-tRNA synthetase [Moritella sp. PE36]
          Length = 873

 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 61/147 (41%), Gaps = 11/147 (7%)

Query: 54  VREGSIEIITPEDPRSLAV-IRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKE 111
           +   S  I   +  R  A+ + HS  H+   A++ +  +     G  ++ +   +DF   
Sbjct: 540 IEVNSQVIADVDVSRRKAIGLNHSVTHLAHAALRKVVGDNVQQKGSLVLPERLRFDFSHF 599

Query: 112 QPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENV 171
           +  +  +L ++E+ +   I  +   + + +  + ARE         K          + V
Sbjct: 600 EGVTPAQLIEVERLVNAQIRANHEVVTEVMDIDAAREAGAMALFGEKY--------DDEV 651

Query: 172 TLYRQGEW-FDLCRGPHVRSTGQVKKF 197
            + R G++  +LC G HV+ TG +  F
Sbjct: 652 RVVRMGDFSIELCGGTHVKRTGDIGFF 678


>gi|170726825|ref|YP_001760851.1| seryl-tRNA synthetase [Shewanella woodyi ATCC 51908]
 gi|238688660|sp|B1KG49|SYS_SHEWM RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|169812172|gb|ACA86756.1| seryl-tRNA synthetase [Shewanella woodyi ATCC 51908]
          Length = 428

 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/223 (17%), Positives = 76/223 (34%), Gaps = 16/223 (7%)

Query: 242 EKRDHRKLAREMDL--FHIAEDGSGVIFWHRKG--WKIFQTLISYMRRKI--KDDYEEIN 295
           E +DH +L   +    F  A   +G  F   KG   ++ + L  +M      +  Y E  
Sbjct: 135 EVKDHVELGETLGGLDFKSAVKITGSRFIIMKGQIARMHRALAQFMLDLHTTEHGYTETY 194

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSY 355
            P ++++     +G    +  ++F  K A    ++ +  +L P        +    +   
Sbjct: 195 VPLLVNEDSLMGTGQLPKFGEDLFHTKPA---TEEGQGLSLIPTAEVPLTNIARDTIIDE 251

Query: 356 RELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLII 412
            ELPV+L      +R+E         GL+R   F + +       E        +     
Sbjct: 252 AELPVKLTAHTPCFRSEAGSYGRDTRGLIRQHQFDKVELVQLVKPEDSMAALDALTGHAE 311

Query: 413 SIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
            + +  G     V L T              +W  A+N  + +
Sbjct: 312 KVLEKLGLPYRTVILCTGDMGFGSSKTFDIEVWLPAQNTYREI 354


>gi|17547056|ref|NP_520458.1| seryl-tRNA synthetase [Ralstonia solanacearum GMI1000]
 gi|30173189|sp|Q8XWY3|SYS_RALSO RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|17429357|emb|CAD16044.1| probable seryl-trna synthetase protein [Ralstonia solanacearum
           GMI1000]
          Length = 438

 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/226 (16%), Positives = 77/226 (34%), Gaps = 18/226 (7%)

Query: 244 RDHRKLAREMDL-FHIAEDGSGVIFWHRKG--WKIFQTLISYMRRKI--KDDYEEINTPQ 298
           +DH  L   + L F +A   SG  F   KG   ++ + L  +M      +  Y E   P 
Sbjct: 137 KDHVDLGAGLGLDFDVAAKLSGSRFAVLKGPVARLHRALAQFMLDTHTQEHGYTEAYVPY 196

Query: 299 VLDQHLWQQSGHWDSYRANMFAVK------CADDTIKDLRTFALKPMNCPGHVAVFNHGL 352
           +++    + +G    +  ++F V          +  + +  F L P        +    +
Sbjct: 197 IVNAASMRGTGQLPKFEEDLFRVPRKMGQATEAEAGEHVENFYLIPTAEVPLTNLVRDEI 256

Query: 353 KSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHN 409
            +   LP++ A     +R+E         G++R   F + +       E  F     + +
Sbjct: 257 VAGDALPMKFAAHSPCFRSEAGSYGKDTRGMIRQHQFDKVEMVQIVQPETSFEALDAMTH 316

Query: 410 LIISIYKD----FGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
              +I +     F    +          +     +W  A+N  + +
Sbjct: 317 HAENILRKLELPFRTVVLCTGDMGFGSTKTYDIEVWIPAQNTYREI 362


>gi|330840034|ref|YP_004414614.1| Seryl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
 gi|329747798|gb|AEC01155.1| Seryl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
          Length = 425

 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/239 (14%), Positives = 77/239 (32%), Gaps = 25/239 (10%)

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLIS 281
           G       E   +     + E  D  + A+               F+   G ++ +  I+
Sbjct: 127 GEPRTFTFEPKAHWDLGADLEILDAERAAKVTGARFT--------FYKGLGARLERACIN 178

Query: 282 YMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPM 339
           +M      K  Y E+  P + ++     +G    +  +MF ++  D        + L P 
Sbjct: 179 FMMDLHATKHGYTEMLAPYIANEASMIGTGQLPKFAEDMFKLEGLD--------YYLVPT 230

Query: 340 NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCT 396
                       +   R+LP R   + + +R E   +     GL+R   F + +   F  
Sbjct: 231 AEVPTTNYHRDEILDGRKLPERYTSYTACFRAEAGSAGRDTRGLIRQHQFNKVELIKFTK 290

Query: 397 KEQMFNECLKIHNLIISIYKDFGFEKI----MVKLSTRPEKRVGSDALWDDAENIMKGV 451
            E+ ++E   + +    + +                +    +     +W  A+N  + +
Sbjct: 291 PEESWDELEGMVDAAEDVLRILEIPYHVVLLCTGDMSFTSAKTYDIEVWMPAQNTYREI 349


>gi|328794107|ref|XP_001123169.2| PREDICTED: seryl-tRNA synthetase-like, partial [Apis mellifera]
          Length = 258

 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/186 (15%), Positives = 59/186 (31%), Gaps = 11/186 (5%)

Query: 275 IFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           + + L  +M      +  Y E  TP +++  +   +G    +  +M+ V C  +     +
Sbjct: 1   LHRALAQFMLDTHTQQHGYTEHYTPHIVNPEILLGTGQLPKFAEDMYKVSCGGEENTQEQ 60

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQD 389
                              + S  ELP +L      +R+E         GL+R   F + 
Sbjct: 61  YLIS--TAEITLTNTVRERILSKDELPKKLTAHSPCFRSEAGSYGKDTRGLIRQHQFDKV 118

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAE 445
           +       E  +    ++      I +       ++ L T              +W  A+
Sbjct: 119 EMVQIQRPENSYAALEEMVGHAEKILQLLELPYRVIVLCTGDMGFSAAKTYDLEVWVPAQ 178

Query: 446 NIMKGV 451
           N  + +
Sbjct: 179 NTYREI 184


>gi|254448289|ref|ZP_05061751.1| alanyl-tRNA synthetase [gamma proteobacterium HTCC5015]
 gi|198262156|gb|EDY86439.1| alanyl-tRNA synthetase [gamma proteobacterium HTCC5015]
          Length = 868

 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/149 (20%), Positives = 61/149 (40%), Gaps = 11/149 (7%)

Query: 54  VREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGF-YYDFDKEQ 112
           + +  +  +     R+   + HS  H+M  A++ +  +     G ++ + +  +DF   Q
Sbjct: 536 LNDNILAEVDMAKRRATE-LNHSATHLMHWALREVLGDHVQQKGSLVNEEYLRFDFSHFQ 594

Query: 113 PFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVT 172
           P +  ELAQ+E  +   I ++     + ++ E A+          K          + V 
Sbjct: 595 PMTDSELAQVEDLVNAEILKNRATQTRLMTMEDAKAAGAMALFGEKY--------GDEVR 646

Query: 173 LYRQGE-WFDLCRGPHVRSTGQVKKFFKL 200
           +   G+   +LC G HV  TG +  F  +
Sbjct: 647 VLNIGDHSIELCGGTHVDRTGDIGLFKLI 675


>gi|91204886|ref|YP_537241.1| alanyl-tRNA synthetase [Rickettsia bellii RML369-C]
 gi|122426110|sp|Q1RKG2|SYA_RICBR RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|91068430|gb|ABE04152.1| Alanyl-tRNA synthetase [Rickettsia bellii RML369-C]
          Length = 877

 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/133 (22%), Positives = 51/133 (38%), Gaps = 10/133 (7%)

Query: 73  IRHSCAHIMAEAVQSIWPEVQVAIGPIIEDGF-YYDFDKEQPFSSDELAQIEKKMQEIIA 131
           I HS  H++   +  I  +     G ++   +  +D    +  + +E+  IE K+ EII 
Sbjct: 565 IHHSATHLLHAVLHQILGKHVTQKGSLVATSYLRFDISHPKALTPEEIVLIEDKVNEIIR 624

Query: 132 RDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE-WFDLCRGPHVRS 190
            +       +S E A +         K            V + + GE   +LC G HVR 
Sbjct: 625 DNHEVDTTLMSTEDAVKQGAMALFGEKY--------DSEVRVVKMGETSLELCGGTHVRH 676

Query: 191 TGQVKKFFKLMKV 203
           TG +  F    + 
Sbjct: 677 TGDIGCFKITSES 689


>gi|332292251|ref|YP_004430860.1| alanyl-tRNA synthetase [Krokinobacter diaphorus 4H-3-7-5]
 gi|332170337|gb|AEE19592.1| alanyl-tRNA synthetase [Krokinobacter diaphorus 4H-3-7-5]
          Length = 870

 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/145 (18%), Positives = 60/145 (41%), Gaps = 10/145 (6%)

Query: 55  REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQP 113
            +G+ + +     RS   + H+  H++ + ++ +        G ++  G   +DF     
Sbjct: 542 TDGTFKAVVDAKQRSRTAVNHTATHLLHQGLRKVLGTHVEQKGSMVHSGNLRFDFAHFSR 601

Query: 114 FSSDELAQIEKKMQEIIARDSPFLKQY-LSHEKARELFESKKEAYKVEILESIPAKENVT 172
            + +EL ++E  +   I  +    +Q  + +++A +         K          + V 
Sbjct: 602 VTKEELKEVEDFVNARIRENLSLEEQRGIPYDQAVQEGAIALFGEKY--------GDAVR 653

Query: 173 LYRQGEWFDLCRGPHVRSTGQVKKF 197
             R G+  +LC G HV++TG +  F
Sbjct: 654 TIRFGKSMELCGGTHVKNTGDIWHF 678


>gi|327480895|gb|AEA84205.1| seryl-tRNA synthetase [Pseudomonas stutzeri DSM 4166]
          Length = 426

 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 76/224 (33%), Gaps = 24/224 (10%)

Query: 244 RDHRKLAREMDL--FHIAEDGSGVIFWHRKG--WKIFQTLISYMRRKIKD--DYEEINTP 297
           +DH  L  +     F  A   SG  F   +G   ++ + L  +M         YEE  TP
Sbjct: 137 QDHVALGEQHGWLDFETAAKLSGARFALMRGPIARLHRALAQFMIDLHTREHGYEEAYTP 196

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++     Q +G    +  ++F +    +       F L P        +    +   ++
Sbjct: 197 YLVQAPALQGTGQLPKFEDDLFKISREGEA-----DFYLIPTAEVSLTNIVAGEILDAKQ 251

Query: 358 LPVRLAEFGSVYRNE--PSGS-LHGLMRVRGFTQDDA-------HVFCTKEQMFNECLKI 407
           LP++       +R+E   SG    G++R   F + +          F   E++     K+
Sbjct: 252 LPLKFVAHTPCFRSEAGASGRDTRGMIRQHQFDKVEMVQIVEPSKSFEALEELTGNAEKV 311

Query: 408 HNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMKGV 451
             L+   Y+        +              +W  +++  + +
Sbjct: 312 LQLLELPYRVLSLCTGDMGFGATKTY---DLEVWVPSQDKYREI 352


>gi|261379016|ref|ZP_05983589.1| alanine--tRNA ligase [Neisseria cinerea ATCC 14685]
 gi|269144550|gb|EEZ70968.1| alanine--tRNA ligase [Neisseria cinerea ATCC 14685]
          Length = 874

 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 59/141 (41%), Gaps = 13/141 (9%)

Query: 62  ITPEDPRSLA---VIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSD 117
           +T +    +    +  HS  H+M +A++ +  E     G  +  +   +D    Q  +++
Sbjct: 546 VTAKVDDGIRNANMRNHSATHLMHKALRDVLGEHVEQKGSLVTAESTRFDISHPQAVTAE 605

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           E+A++E ++ E I  +       +S E A++         K          + V + + G
Sbjct: 606 EIAEVECRVNEAILANVAVNAAIMSMEDAQKTGAMMLFGEKY--------GDEVRVLQMG 657

Query: 178 EW-FDLCRGPHVRSTGQVKKF 197
            +  +LC G HV  TG +  F
Sbjct: 658 GFSTELCGGTHVSRTGDIGLF 678


>gi|160886575|ref|ZP_02067578.1| hypothetical protein BACOVA_04586 [Bacteroides ovatus ATCC 8483]
 gi|260173328|ref|ZP_05759740.1| histidyl-tRNA synthetase [Bacteroides sp. D2]
 gi|293373217|ref|ZP_06619579.1| histidine--tRNA ligase [Bacteroides ovatus SD CMC 3f]
 gi|315921601|ref|ZP_07917841.1| histidyl-tRNA synthetase [Bacteroides sp. D2]
 gi|156108460|gb|EDO10205.1| hypothetical protein BACOVA_04586 [Bacteroides ovatus ATCC 8483]
 gi|292631865|gb|EFF50481.1| histidine--tRNA ligase [Bacteroides ovatus SD CMC 3f]
 gi|313695476|gb|EFS32311.1| histidyl-tRNA synthetase [Bacteroides sp. D2]
          Length = 454

 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/208 (15%), Positives = 72/208 (34%), Gaps = 27/208 (12%)

Query: 442 DDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFN 501
           +++E I+   L+T+   ++  ++  +  G   + G  FE    D        G      N
Sbjct: 268 EESEFIL-NTLETMGLKNEIELDLTLARGLNYYTGAIFEVKALDVQIGSITGGGR--YDN 324

Query: 502 LPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI----- 556
           L   F    V+              +    +R   ++ +       L L P +A+     
Sbjct: 325 LTGVFGMAGVSGVG-----------ISFGADRIFDVLNQ-------LELYPKEAVNGTEL 366

Query: 557 -VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEAS 615
                      ++  I + +++  +  E       +  ++   + K IP + I G+ E +
Sbjct: 367 LFINFGEKEAAFSMGILSKVRAAGIRAEIFPDAAKMKKQMSYANTKNIPFVAIVGENEMN 426

Query: 616 ERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           E    ++   +     VS  + I ++ K
Sbjct: 427 EGKAMLKNMETGEQNLVSAEELIAVVKK 454


>gi|67924788|ref|ZP_00518188.1| Seryl-tRNA synthetase, class IIa [Crocosphaera watsonii WH 8501]
 gi|67853356|gb|EAM48715.1| Seryl-tRNA synthetase, class IIa [Crocosphaera watsonii WH 8501]
          Length = 427

 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 66/188 (35%), Gaps = 16/188 (8%)

Query: 272 GWKIFQTLISYM-RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G  + + LI++M  ++I   Y E+  P +++    Q +G    +    F V   D     
Sbjct: 176 GAALERALINFMLDQQISAGYLEVMPPVLINSEALQGTGQLPKFAEESFKVPDDD----- 230

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
                L P        +++  +    +LP++   F   +R E         GL+R+  F 
Sbjct: 231 ---LWLAPTAEVPVTNLYSSEILEAEKLPIKHCAFTPCFRREAGSYGKDTRGLIRLHQFN 287

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALWDD 443
           + +       E    E  ++     +I +       +++L T              +W  
Sbjct: 288 KVELVKLVHPETSEVEHQQLVKDAEAILQLLKLPYRVLELCTGDLGFGATKCYDLEVWLP 347

Query: 444 AENIMKGV 451
           + N  + +
Sbjct: 348 SSNSYREI 355


>gi|299143683|ref|ZP_07036763.1| histidine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str.
           F0131]
 gi|298518168|gb|EFI41907.1| histidine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str.
           F0131]
          Length = 437

 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 14/88 (15%), Positives = 39/88 (44%), Gaps = 1/88 (1%)

Query: 556 IVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEAS 615
           IV  +T   V+ A ++ + L+   ++      +  I  K +  +  ++P  ++ G+ E  
Sbjct: 350 IVIPMT-GFVDEAIKLVSKLRDGGINTIIYTEDAKIAKKFKYANALEVPYTLVVGENEVK 408

Query: 616 ERSIGIRRFGSTTTQKVSLLDAIPILTK 643
                ++   +   +++SL + I  + +
Sbjct: 409 TEKYALKDMVTGNQEELSLSEIISRIKE 436



 Score = 45.2 bits (105), Expect = 0.036,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 78/217 (35%), Gaps = 27/217 (12%)

Query: 259 AEDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRAN 317
                G +    K   +F  ++  +R+  +   +  I+TP +               ++ 
Sbjct: 7   PSTLPGFMELLPKEQILFNEMMDTIRKNFEKHGFLPIDTPAI--------------EKSE 52

Query: 318 MFAVKCADDTIKDLRTFALKPMNCPGHVAV----FNHGLKSYREL--PVRLAEFGSVYRN 371
           +   K   +T K +  F     +      +      + ++ + +L  P R    G VYR 
Sbjct: 53  VLLAKGGGETEKQIYRFTKGDTDMSLRFDLTVPLARYTVEHFNDLSFPFRRYHIGKVYRG 112

Query: 372 EPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRP 431
           E +       R R F Q D      ++       +   +I   +KD GF+   ++++ R 
Sbjct: 113 EKAQK----GRFREFYQCDIDTIGNEKLDILNDAEFPVVIYHTFKDLGFDDFTIRINNRK 168

Query: 432 EKR-VGSDALWDDAENIMKGVLDTIKNSSQDRINTGV 467
             +         D+ ++++ V D I    ++++   +
Sbjct: 169 ILKGFFESLNILDSVDVLRAV-DKIDKIGREKVKEEL 204


>gi|294793380|ref|ZP_06758525.1| serine--tRNA ligase [Veillonella sp. 6_1_27]
 gi|294455811|gb|EFG24176.1| serine--tRNA ligase [Veillonella sp. 6_1_27]
          Length = 426

 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/246 (15%), Positives = 81/246 (32%), Gaps = 21/246 (8%)

Query: 219 RIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIF--WHRKGWK 274
            +        ++         + + + H  L   +D+  F+ A   SG  F  +   G +
Sbjct: 112 PVGADEDENVEQRKWGEPRQFDFDVQAHWDLGENLDILDFNRAGKMSGARFTVYKGLGAR 171

Query: 275 IFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           + + LI++M     D   Y E+ TP ++ +     +G    +  +M+ V        +  
Sbjct: 172 LERALINFMVDLHVDKHGYTEMMTPYMVTRETLTGTGQLPKFAEDMYHV--------EGT 223

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQD 389
            + L P             + S  ELP     F + +R E   +     GL+R   F + 
Sbjct: 224 EYFLIPTAEVTLTNYHGGEILSEEELPKYYTAFTACFRAEAGSAGRDTRGLIRQHQFNKV 283

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYK----DFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
           +       E  F E   + +    + +     F    +          +     +W  A+
Sbjct: 284 EMVKLAKPEDSFKELETLTDNAEEVLRLLELPFRVITLCTGDMGFGSAKTYDVEVWMPAQ 343

Query: 446 NIMKGV 451
              + +
Sbjct: 344 GKYREI 349


>gi|289551842|ref|YP_003472746.1| Seryl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01]
 gi|289181373|gb|ADC88618.1| Seryl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01]
          Length = 427

 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 48/353 (13%), Positives = 118/353 (33%), Gaps = 35/353 (9%)

Query: 110 KEQPFSSDELAQIEKKMQEIIAR--DSPFLKQYLSHEKARELFESKKEAYKVEILESIPA 167
            + P   D++ Q++++ +++I +  +    +  +S + A +    +     ++ +  +  
Sbjct: 22  GDDPKVVDDVLQLDEQRRKLIGQTEEMKANRNKVSEQIAEKKRNQENADDVIKEMRELGD 81

Query: 168 KENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNT 227
           K      +  E  +  +   +R    +                D     L + +GT  + 
Sbjct: 82  KIKEIDTKLNEIDNKIKDTLIRIPNLIHD-------DVPQGASDEENVELKK-WGTPRDF 133

Query: 228 QQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMRRKI 287
             E   +   +EE    +  + A+      +             G ++ + L++YM  K 
Sbjct: 134 DFEPKAHWDLVEELNMANFERAAKVSGARFVYLTK--------DGAQLERALMNYMITKH 185

Query: 288 --KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHV 345
             +  Y E+  PQ+++      +G    +  ++F V        +       P       
Sbjct: 186 TTQHGYTEMMVPQLVNADTMFGTGQLPKFEEDLFKV--------EKEGLYTIPTAEVPLT 237

Query: 346 AVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFN 402
             +   +     LP +     + +R+E   +     GL+R+  F + +   F   E  +N
Sbjct: 238 NYYRDEIIQPGVLPEKFTGQSACFRSEAGSAGRDTRGLIRLHQFDKVEMVRFEKPEDSWN 297

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
              ++     +I ++       V L T              +W  + N  K +
Sbjct: 298 ALEEMTTNAEAILEELKLPYRRVILCTGDIGFSAAKTYDLEVWLPSYNDYKEI 350


>gi|288817800|ref|YP_003432147.1| histidyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|288787199|dbj|BAI68946.1| histidyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|308751398|gb|ADO44881.1| histidyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
          Length = 408

 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 57/379 (15%), Positives = 124/379 (32%), Gaps = 40/379 (10%)

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
            ++EEI  P V    ++Q+S        ++   +      +  R  AL+P    G V  +
Sbjct: 35  YNFEEIILPVVEYLEVFQRSIGEV---TDIVQKEMFVFQDRKGRWLALRPEGTAGAVRAY 91

Query: 349 NHGLKSYRELP-VRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
               + Y   P V+L   G ++R E   +     R R F Q  A VF T +   +   ++
Sbjct: 92  IQN-RLYALKPYVKLFYEGPMFRYERPQA----GRYRQFHQIGAEVFGTLDPQVDA--QM 144

Query: 408 HNLIISIYKDFGFEKIM------VKLSTRPEKRVGSDALWDDAENIMKGVLD-------- 453
             ++ +I    G    +       ++     K+  SD L D   ++    LD        
Sbjct: 145 IEMVHTILTKLGISATIEINSIGCRVCRPSYKKALSDYLEDVVGHLCDVCLDRKDKNPLR 204

Query: 454 ----------TIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLP 503
                          +   ++         +   K    +     R+       +D+   
Sbjct: 205 VLDCKVETCKEAVKQAPKMVDYLCQECATHYETLKSYLDMLSIPYRENHHLVRGLDYYTK 264

Query: 504 SRFNAFYVN-----SHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVT 558
           + F A             +   ++       +      + IE     +          + 
Sbjct: 265 TVFEAVSDELGITIIAGGRYDYLVEEMGGPPTPAIGFAVGIERISMLVKDLPQEEPLYMV 324

Query: 559 TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERS 618
                 ++YA E+   L+     +ET ++   +  ++   +  K   +++ G+ E  + +
Sbjct: 325 IPFGDTLDYAFEVIKKLRDMGKRVETSYKKANLKKQLELANKLKADYVVLIGEDEKRQNT 384

Query: 619 IGIRRFGSTTTQKVSLLDA 637
           I I+   +   + +S L+ 
Sbjct: 385 ITIKNMHTGMQESISFLEL 403


>gi|205830053|sp|A6TQZ4|SYA_ALKMQ RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
          Length = 880

 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 65/143 (45%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFS 115
            SI+    ++PR      H+  H++ +A++ I  E     G  +  +   +DF   +  S
Sbjct: 548 DSIQGEVDKEPRHNTERNHTATHLLHKALKGIIGEHVEQAGSLVTPEKLRFDFSHFEGLS 607

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           S +L+++E ++ + I           S E+A+++        K          ++V + +
Sbjct: 608 SADLSKVELEVNQEILNALNVDTVEASLEEAKKMGAMALFGEKY--------GDDVRVVK 659

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G++  +LC G HV+++ ++  F
Sbjct: 660 TGDYSVELCGGTHVKNSSEIGTF 682


>gi|111023856|ref|YP_706828.1| histidyl-tRNA synthetase [Rhodococcus jostii RHA1]
 gi|123045389|sp|Q0S1B6|SYH_RHOSR RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|110823386|gb|ABG98670.1| histidine--tRNA ligase [Rhodococcus jostii RHA1]
          Length = 423

 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/207 (14%), Positives = 71/207 (34%), Gaps = 19/207 (9%)

Query: 438 DALWDDAENIMKGVLDTIKN-SSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
           D L D A+     VL  +   S    +N  ++ G   +    FE+ + D +G        
Sbjct: 227 DHLSDTAKAHFDEVLAHLDALSVPYVVNPRMVRGLDYYTKTTFEF-VHDGLG-------A 278

Query: 497 QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI 556
           Q       R++        +    +       G     + +  E   G      +  +  
Sbjct: 279 QSGIGGGGRYDGLMAQLGGQPLSGIGF---GLGVDRTVLALAAE---GKTAGSTARCEVF 332

Query: 557 VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYK--IREHSIKKIPIIIICGDKEA 614
              +   A      IA  L++  + ++  + N     K  ++        + ++ GD++ 
Sbjct: 333 GVPLGEEAKAKLVVIAQQLRAQGIRVDLAYGNR--GVKGAMKAADRSGAALALVLGDRDI 390

Query: 615 SERSIGIRRFGSTTTQKVSLLDAIPIL 641
           ++ ++GI+   +   + VS  D +  +
Sbjct: 391 ADGTVGIKNLATGDQESVSSADVVARV 417


>gi|325290063|ref|YP_004266244.1| alanyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
 gi|324965464|gb|ADY56243.1| alanyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
          Length = 875

 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 59/159 (37%), Gaps = 30/159 (18%)

Query: 36  KKAVAVAINGKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVA 95
           +  V   ++G++                    R      HS  H++  A++ +  +    
Sbjct: 544 QDTVVAEVDGEI--------------------RKSIAAHHSSTHLLHTALRKVLGQHVQQ 583

Query: 96  IGPII-EDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            G ++ E+   +DF      S++EL  +E+++   I          +  E A+       
Sbjct: 584 AGSLVSEERLRFDFSHFSAMSTEELNTVEEEINRQIRGALSVNIAEMCMEDAKAQGAIAL 643

Query: 155 EAYKVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTG 192
              K          + V + R GE+  +LC G HV++TG
Sbjct: 644 FGEKY--------GDEVRVVRMGEFSTELCGGTHVQNTG 674


>gi|315179812|gb|ADT86726.1| seryl-tRNA synthetase [Vibrio furnissii NCTC 11218]
          Length = 435

 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/190 (12%), Positives = 61/190 (32%), Gaps = 11/190 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + +  +M     +   Y E+  P +++      +G    +  ++F  +   +   D
Sbjct: 172 ARLHRAIAQFMLDLHTEQHGYTELYVPYLVNSDTLFGTGQLPKFGKDLFHTEPLAEKASD 231

Query: 331 L--RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRG 385
              R  +L P        +    +    +LP+++      +R+E         GL+R+  
Sbjct: 232 EEPRRLSLIPTAEVPVTNLVRDTITEEADLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQ 291

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALW 441
           F + +       E       ++      + +        V L T              +W
Sbjct: 292 FDKVELVQITKPEDSMAALEELTGHAEKVLQLLELPYRKVILCTGDMGFGSCKTYDLEVW 351

Query: 442 DDAENIMKGV 451
             A+   + +
Sbjct: 352 VPAQKTYREI 361


>gi|294668779|ref|ZP_06733872.1| serine--tRNA ligase [Neisseria elongata subsp. glycolytica ATCC
           29315]
 gi|291309296|gb|EFE50539.1| serine--tRNA ligase [Neisseria elongata subsp. glycolytica ATCC
           29315]
          Length = 384

 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 64/188 (34%), Gaps = 11/188 (5%)

Query: 273 WKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M      + DY E  TP +++      +G    +  ++F V    D  K 
Sbjct: 125 ARLHRALAQFMLDTHTQQHDYTEHYTPYIVNDSTLYGTGQLPKFGEDLFHVTRGGDESKT 184

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFT 387
            +     P             +    +LP++L      +R+E       + GL+R   F 
Sbjct: 185 TQYLI--PTAEVTLTNTVRDSIVPSEKLPLKLTAHSPCFRSEAGSHGKDVRGLIRQHQFD 242

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E  ++   ++     +I K       ++ L T              +W  
Sbjct: 243 KVEMVQIVRPETSYDALEEMVGHAENILKALELPYRVITLCTGDMGFGAAKTYDLEVWVP 302

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 303 AQNTYREI 310


>gi|150390222|ref|YP_001320271.1| alanyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
 gi|149950084|gb|ABR48612.1| alanyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
          Length = 893

 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 65/143 (45%), Gaps = 10/143 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFS 115
            SI+    ++PR      H+  H++ +A++ I  E     G  +  +   +DF   +  S
Sbjct: 561 DSIQGEVDKEPRHNTERNHTATHLLHKALKGIIGEHVEQAGSLVTPEKLRFDFSHFEGLS 620

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           S +L+++E ++ + I           S E+A+++        K          ++V + +
Sbjct: 621 SADLSKVELEVNQEILNALNVDTVEASLEEAKKMGAMALFGEKY--------GDDVRVVK 672

Query: 176 QGEW-FDLCRGPHVRSTGQVKKF 197
            G++  +LC G HV+++ ++  F
Sbjct: 673 TGDYSVELCGGTHVKNSSEIGTF 695


>gi|117619333|ref|YP_856399.1| seryl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila ATCC
           7966]
 gi|166200594|sp|A0KJE8|SYS_AERHH RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|117560740|gb|ABK37688.1| seryl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila ATCC
           7966]
          Length = 431

 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/190 (14%), Positives = 69/190 (36%), Gaps = 11/190 (5%)

Query: 273 WKIFQTLISYMRRK--IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFA--VKCADDTI 328
            ++ + L  +M     ++  Y E   P +++      +G    +  ++F   +    +  
Sbjct: 170 ARLHRALAQFMLDLHTLQHGYTECYVPYLVNPDSLYGTGQLPKFSQDLFNTGIDGEGEEE 229

Query: 329 KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRG 385
             +R F+L P +      +    +   +ELP+++      +R+E         GL+R+  
Sbjct: 230 GKVRKFSLIPTSEVPLTNMARDEIFDEQELPIKMTAHSPCFRSEAGSYGRDTRGLIRMHQ 289

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALW 441
           F + +       E+ +    ++      + +       ++ LST              +W
Sbjct: 290 FDKVEMVQLVHPEKSWEALEEMAGHAEKVLQLLELPYRVMALSTGDMGFCAAKTYDLEVW 349

Query: 442 DDAENIMKGV 451
             A+N  + +
Sbjct: 350 LPAQNTYREI 359


>gi|312792870|ref|YP_004025793.1| seryl-tRNA synthetase [Caldicellulosiruptor kristjanssonii 177R1B]
 gi|312180010|gb|ADQ40180.1| seryl-tRNA synthetase [Caldicellulosiruptor kristjanssonii 177R1B]
          Length = 420

 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 68/195 (34%), Gaps = 18/195 (9%)

Query: 237 FLEESEKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRRKIKD--D 290
            + + E + H ++   + +          GS   F+   G ++ + LI++M     +   
Sbjct: 130 RVPDFEVKPHWEIGMSLGILDFERASKVSGSRFTFYRGLGARLERALINFMLDLHIEKHG 189

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNH 350
           Y EI  P ++ +     +G    +  + F              + L P            
Sbjct: 190 YTEIFPPFLVARKSMIGTGQLPKFEEDAFKTTD---------DYFLIPTAEVPVTNYHRE 240

Query: 351 GLKSYRELPVRLAEFGSVYRNE---PSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKI 407
            +    +LP++   + + +R E         GL+R   F + +   F   E+ ++E  K+
Sbjct: 241 EILKEEDLPIKYVAYSACFRAEAGAAGKDTRGLIRQHQFNKVELVKFAKPEESYDELEKL 300

Query: 408 HNLIISIYKDFGFEK 422
                 + K+ G   
Sbjct: 301 TADAEDVLKELGLPY 315


>gi|291276861|ref|YP_003516633.1| alanyl-tRNA synthetase [Helicobacter mustelae 12198]
 gi|290964055|emb|CBG39895.1| alanyl-tRNA synthetase [Helicobacter mustelae 12198]
          Length = 850

 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 65/156 (41%), Gaps = 14/156 (8%)

Query: 53  PVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKE 111
           P++ G I  +  +  R      HS  H++   ++  +       G ++E +   +DF   
Sbjct: 535 PLKVGEIYEVLVDHSRQEIAKHHSATHLLHAILREKFGSQVAQAGSLVEANRLRFDFSFP 594

Query: 112 QPFSSDELAQIEKKMQEIIARDSP--FLKQYLSHEKARELFESKKEAYKVEILESIPAKE 169
           +P + +EL +I+  +  +IA++ P       +   K R       E Y           E
Sbjct: 595 RPITKEELLEIQDSVNALIAKNLPARVEHMEIGQAKTRGAIALFGEKY----------GE 644

Query: 170 NVTLYRQG-EWFDLCRGPHVRSTGQVKKFFKLMKVA 204
           NV +   G E  +LC G HV++TG +  F+   +  
Sbjct: 645 NVRVVSFGEESCELCGGIHVQNTGFIGNFYITKENG 680


>gi|220932938|ref|YP_002509846.1| seryl-tRNA synthetase [Halothermothrix orenii H 168]
 gi|254783031|sp|B8CZZ9|SYS_HALOH RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|219994248|gb|ACL70851.1| seryl-tRNA synthetase [Halothermothrix orenii H 168]
          Length = 422

 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 69/188 (36%), Gaps = 16/188 (8%)

Query: 272 GWKIFQTLISYMRRKI-KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G ++ ++LIS+M     ++ Y EI  P +++      +G    +  +MF V        +
Sbjct: 169 GARLERSLISFMIDHHTQNGYTEIFPPFMVNSDSCIGTGQLPKFAGDMFKV--------E 220

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFT 387
              + L P        ++   + +  +LPV    + + +R E         G++R   F 
Sbjct: 221 GTDYYLIPTAEVPVTNLYRDEILNAEDLPVYHVAYSACFRAEAGAHGRDTRGIIRQHQFN 280

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +   F   ++ F E  K+      I +       +V L T              +W  
Sbjct: 281 KVELVKFVHPDKSFEELEKLTRNAEEILQMLELPYRVVTLCTGDLTFSSAKTYDIEVWMP 340

Query: 444 AENIMKGV 451
           A +  + +
Sbjct: 341 AYDTYREI 348


>gi|116621601|ref|YP_823757.1| seryl-tRNA synthetase [Candidatus Solibacter usitatus Ellin6076]
 gi|122254610|sp|Q024V4|SYS_SOLUE RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|116224763|gb|ABJ83472.1| seryl-tRNA synthetase [Candidatus Solibacter usitatus Ellin6076]
          Length = 424

 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 67/189 (35%), Gaps = 17/189 (8%)

Query: 272 GWKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
           G ++ + L+++       +  Y E+  P +++      +G    +  ++F ++ +D    
Sbjct: 169 GARLERALVNFFLDVHTQQHGYTEVLPPFMVNSASLYGTGQLPKFAEDLFKIENSD---- 224

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGF 386
               F L P        ++        +LPV+L  +   +R+E       + G++R   F
Sbjct: 225 ----FWLIPTAEVPVTNIYRDETLEGEQLPVKLCAYTPCFRSEAGSYGRDVRGIIRQHQF 280

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI----MVKLSTRPEKRVGSDALWD 442
            + +   F   EQ ++E  K+      I    G                  +     +W 
Sbjct: 281 QKVELVKFTRPEQSYDELDKLTADAEDILVRLGLPFRTVVLCTGDMGPSSAKTYDIEVWL 340

Query: 443 DAENIMKGV 451
             +N  K +
Sbjct: 341 PGQNNYKEI 349


>gi|255658869|ref|ZP_05404278.1| serine--tRNA ligase [Mitsuokella multacida DSM 20544]
 gi|260849274|gb|EEX69281.1| serine--tRNA ligase [Mitsuokella multacida DSM 20544]
          Length = 426

 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/244 (15%), Positives = 85/244 (34%), Gaps = 22/244 (9%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDL----FHIAEDGSGVIFWHRKGWKIF 276
           G       E+ ++    +   E + H  L  E+D+          G+   F+   G ++ 
Sbjct: 114 GKDDTENPEVRKWGEPTKFDFEPKAHWDLGTELDILDADRAAKVTGARFTFYKGLGARLE 173

Query: 277 QTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           +  I++M     +   Y E+  P + ++     +G    +  +MF ++  D        +
Sbjct: 174 RACINFMMDLHANKHGYTEMLAPYIANKESMTGTGQLPKFADDMFKLEGLD--------Y 225

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDA 391
            L P             +    +LP   + + + +R E   +     GL+R   F + + 
Sbjct: 226 YLVPTAEVPTTNYHRDEILDGNKLPEYYSCYTACFRAEAGSAGRDTRGLIRQHQFNKVEL 285

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENI 447
             F   E  ++E   + +    + +       +VKL T              +W  A+N 
Sbjct: 286 IKFVKPETSWHELDTMVDAAEDVLRLLELPYHVVKLCTGDMSFTSATTYDLEVWFPAQNK 345

Query: 448 MKGV 451
            + +
Sbjct: 346 YREI 349


>gi|194335545|ref|YP_002017339.1| histidyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1]
 gi|229558702|sp|B4SCE2|SYH_PELPB RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|194308022|gb|ACF42722.1| histidyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1]
          Length = 429

 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 13/92 (14%), Positives = 36/92 (39%)

Query: 555 AIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
             V        + A +I   L+   +  E D    ++  ++RE +  K    +  G  E 
Sbjct: 333 VYVIVQQQDLADNALQIVWRLRKAGIKTEVDLAARSMKAQMREANKIKAAYALFIGTTEE 392

Query: 615 SERSIGIRRFGSTTTQKVSLLDAIPILTKESL 646
           +     ++   ++    ++L   + +L ++++
Sbjct: 393 TTGLYALKNLETSEQITLTLEAVLELLREQAV 424


>gi|530495|emb|CAA83845.1| Pro-tRNA synthetase [Mycoplasma capricolum subsp. capricolum ATCC
           27343]
          Length = 110

 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/106 (16%), Positives = 51/106 (48%), Gaps = 3/106 (2%)

Query: 264 GVIFWHRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLW-QQSGHWDSYRANMFAV 321
           G + +   G++I++ +  Y+  + K  + + +  P ++ + L+ ++  H D +   +  V
Sbjct: 6   GTMIFRPYGYRIWELIQKYLDEEFKKVNVDNVYFPLLIPESLFNKEKDHIDGFSPEIATV 65

Query: 322 KCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGS 367
                   +   F ++P +    +  F++ + SYR+LP+   ++ +
Sbjct: 66  TRVGQKQLEENLF-IRPTSEVLMMDYFSNEINSYRDLPLIYNQWCN 110


>gi|313885025|ref|ZP_07818777.1| alanine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
 gi|312619716|gb|EFR31153.1| alanine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
          Length = 883

 Score = 59.0 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 58/156 (37%), Gaps = 9/156 (5%)

Query: 46  KVCDLSDPVR-EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDG 103
           KV  L+ P+  + S  +      R+L    H+  H++  A++ +  +     G  +  D 
Sbjct: 539 KVEALTMPINLDQSYTLQVDPKHRTLTNQNHTATHLLHRALKDVLGDHANQAGSYVGPDR 598

Query: 104 FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILE 163
             +DF      +++E+  +E K+   I          +  ++A+ L        K     
Sbjct: 599 LRFDFSHFGKMTAEEIKAVEDKVNAFIEASLAVNTTEMPIDEAKALGAMALFGEKY---- 654

Query: 164 SIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFK 199
                    +    E  +LC G HV +T Q+  F  
Sbjct: 655 ---GDVVRVVNISNESIELCGGTHVANTNQIGTFKL 687


>gi|293392027|ref|ZP_06636361.1| seryl-tRNA synthetase [Aggregatibacter actinomycetemcomitans D7S-1]
 gi|290952561|gb|EFE02680.1| seryl-tRNA synthetase [Aggregatibacter actinomycetemcomitans D7S-1]
          Length = 438

 Score = 59.0 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 64/190 (33%), Gaps = 11/190 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD--DTI 328
            K+ + +  +M     +   Y E   P +++      +G    +  ++F  K  +  D  
Sbjct: 171 AKLHRAIAQFMLDLHTEQHGYTEAYVPYLVNHDTLYGTGQLPKFSEDLFHTKPLEGQDPN 230

Query: 329 KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRG 385
           +  RT+ L P        +    +     LP+++      +R+E         GL+R+  
Sbjct: 231 EVQRTYGLIPTAEVPVTNLVRGEILDAENLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQ 290

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALW 441
           F + +       E+      ++      + +  G     V L T              +W
Sbjct: 291 FDKVELVQIVEPEKSMEALEELTGHAEKVLQLLGLPYRKVLLCTGDMGFGSCKTYDLEVW 350

Query: 442 DDAENIMKGV 451
             A+N  + +
Sbjct: 351 VSAQNTYREI 360


>gi|169831068|ref|YP_001717050.1| histidyl-tRNA synthetase [Candidatus Desulforudis audaxviator
           MP104C]
 gi|229558654|sp|B1I363|SYH_DESAP RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|169637912|gb|ACA59418.1| histidyl-tRNA synthetase [Candidatus Desulforudis audaxviator
           MP104C]
          Length = 420

 Score = 59.0 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 65/409 (15%), Positives = 137/409 (33%), Gaps = 49/409 (11%)

Query: 276 FQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           +Q + + +R   +   Y EI TP + +     Q G  D    ++   +    T K  R+ 
Sbjct: 20  WQRVEAVIRDLCRVYGYGEIRTP-LFEATELFQRGVGDI--TDIVEKEMYTFTDKGGRSL 76

Query: 335 ALKPM-NCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
            L+P    P   A   +GL +  + PV+L   G ++R +   +     R R F Q    +
Sbjct: 77  TLRPEGTAPVTRAYLENGLHAVPQ-PVKLFYVGPMFRYDRPQA----GRYRQFHQFGVEI 131

Query: 394 FCTKEQMFNECLKIHNLIISIYKDFGF-------EKIMVKLSTRPEKRVGSDALWDDAEN 446
           F   +   +   ++  L +  +   G          +         +R  +D     A+ 
Sbjct: 132 FGAADPAADA--EVIALAMHFFDRLGLAGLELHLNSVGCPGCRAVLRRKLADYFEPRADE 189

Query: 447 IMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKF--EYILKDAIG------RDWQCGTIQV 498
           +       ++ +    ++        A  G     +Y+  +  G      R      I  
Sbjct: 190 LCANCRGRLRKNPLRLLDCKEERCREAGRGAPVPVDYLCPECGGHFGRVQRYLDLLGISF 249

Query: 499 DFN-LPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP---------- 547
             N    R   +Y  +  E   P    +   G   R+ G++       +P          
Sbjct: 250 KLNPCLVRGLDYYTRTAFEILVPGGGAQDAVGGGGRYDGLVSAIGGPAVPGVGFALGLER 309

Query: 548 ---LW--------LSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIR 596
              LW        L     +         E A  + + L++  +  + ++   ++  +++
Sbjct: 310 TLLLWSRQAGEEVLPQGPVVFIATAGETEETATVLLSGLRAAGVPADREYTGRSLKAQMK 369

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTKES 645
             +      +II G  E     + +R  G+    +VSL + +  L +++
Sbjct: 370 FAAKLGARWVIIVGKDELEAGEVILRDMGAGLQTRVSLGEVVERLRRDA 418


>gi|157964383|ref|YP_001499207.1| histidyl-tRNA synthetase [Rickettsia massiliae MTU5]
 gi|157844159|gb|ABV84660.1| Histidyl-tRNA synthetase [Rickettsia massiliae MTU5]
          Length = 441

 Score = 59.0 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 70/426 (16%), Positives = 147/426 (34%), Gaps = 77/426 (18%)

Query: 269 HRKGWKIFQTLISYMRRK-IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
               +K+   +I+  R       Y++++TP +    ++ +S       +++ + +     
Sbjct: 42  LPDDYKVHDYIINKARDVGALYGYKQMSTPILEYTKVFNRS---MGESSDVISKEIYSFL 98

Query: 328 IKDLRTFALKP--MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRG 385
            K   + AL+P    C     + N       +LP++    G V+R +   +     R R 
Sbjct: 99  DKSNDSVALRPEFTACIIRSLISNGLQH---KLPLKFFSTGPVFRYDRPQA----GRQRQ 151

Query: 386 FTQDD-AHVFCTKEQMFNECLKIHNLIISIYKD----------FGFEKIMVKLSTRPEKR 434
           F Q +  ++         + LK+   I+   +            G  +       +  + 
Sbjct: 152 FHQLNYEYIGAKGAITDADTLKLAVDILKALEIEQDTTLELNSLGCNESRSVYQQKLVEY 211

Query: 435 VGS--DALWDDAENIMKG----VLDTIKNSSQD-----RINTGVLLGEGAFY-------- 475
           +    D L ++++  +      +LD+   + Q       + +     E   Y        
Sbjct: 212 LNDFKDQLSEESKRRLSKNPMRILDSKSKTDQKIIAHAPVLSEYYTDESKEYFEELIKYL 271

Query: 476 ---GPKFEYILKDAIGRDWQCGTI----------QVDFNLPSRFNAFYVNSHSEKCHPVM 522
              G K+    +   G D+ C T+          Q       R++       +    P +
Sbjct: 272 DILGVKYSINPRLVRGLDYYCHTVFEFTTKKLGSQSTILAGGRYDGLAKIMGNNDDVPAI 331

Query: 523 IHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSI 582
                   IER I +M E     + L        V  I  + + YA EI + L++ +++ 
Sbjct: 332 ---GFAAGIER-IALMREYNISEVKL------VFVLPIGKNNICYALEIVDKLRTENIAT 381

Query: 583 ETDFRNETINYKIREHSIKKI-----PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
                 E +  KI +  +++I       II  GD+E +  ++ I+         V    A
Sbjct: 382 II----EPLG-KIAK-RMQRIFNENAKFIIFIGDEEQAHNNLKIKDLKKEEEYIVDFAKA 435

Query: 638 IPILTK 643
           + +L K
Sbjct: 436 LELLKK 441


>gi|23097467|ref|NP_690933.1| seryl-tRNA synthetase [Oceanobacillus iheyensis HTE831]
 gi|30173160|sp|Q8EU77|SYS_OCEIH RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|22775690|dbj|BAC11968.1| seryl-tRNA synthetase [Oceanobacillus iheyensis HTE831]
          Length = 424

 Score = 59.0 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 40/356 (11%), Positives = 108/356 (30%), Gaps = 45/356 (12%)

Query: 105 YYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES 164
           + + D  +     E  +++ +  E   + S   ++    E A +      +       + 
Sbjct: 31  FGELDTNRRQLIAETEKLKAQRNEATKKISELKREKKDAEPAIKEMREVGQEIATLDKQL 90

Query: 165 IPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTA 224
              +E +          +   P++          +   +    W             G A
Sbjct: 91  KDIEEKLE-------QIMLSIPNLPHESVPVGEDEEDNIEARKW-------------GEA 130

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR 284
            N   E   +       +  D  +  +           S  +F+   G ++ + L ++M 
Sbjct: 131 PNFAFEALPHWDVATNLDIIDFERAGKVTG--------SRFVFYKGLGARLERALWNFMM 182

Query: 285 RKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
               D   Y+E+  P ++++     +G    +  + F ++  D        + + P    
Sbjct: 183 DLHADEHGYQEMLPPYIVNRSSMTGTGQLPKFEEDAFKLEEWD--------YFMVPTAEV 234

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQ 399
                    +    +LP +   F + +R+E   +     GL+R   F + +   F   E 
Sbjct: 235 PVTNYHREEILGIDDLPKKYVAFSASFRSEAGSAGRDTRGLIRQHQFNKVELVNFVKPED 294

Query: 400 MFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENIMKGV 451
            ++   ++      + +       ++ + T              +W  ++   + +
Sbjct: 295 SYDVLERLTGEAEKVLQLLKLPYRVMSMCTGDLGFTAAKKYDIEVWIPSQETYREI 350


>gi|303235352|ref|ZP_07321969.1| serine--tRNA ligase [Finegoldia magna BVS033A4]
 gi|302493473|gb|EFL53262.1| serine--tRNA ligase [Finegoldia magna BVS033A4]
          Length = 421

 Score = 59.0 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 55/335 (16%), Positives = 113/335 (33%), Gaps = 29/335 (8%)

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
           +  +    + P  K   + EK RE+ +   E+ K E  ++  +K+   + + GE      
Sbjct: 16  EALKKRRGEYPIQKLLATDEKRREVIQKV-ESMKAE--QNKLSKQVPQMKKNGEDTTELF 72

Query: 185 GPHVRSTGQVKKFFKLMKVA----GAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
               + +  +K     +K        Y     N P      G       E+ ++    + 
Sbjct: 73  KNLKKLSDDIKNLDDDLKDIDDEIREYLMEIPNTPNKDVPVGLDDTENLEMRKWGEPRKF 132

Query: 241 S-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEE 293
             + + H  L  ++D+           S    +  KG ++ + L+++M     D   Y E
Sbjct: 133 DFDIKAHWDLGVDLDILDFERATKISKSRFSVFKGKGARLERALMNFMVDLHTDKQGYTE 192

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           +NTP ++     + +G    ++ +MF          +     L P        +    + 
Sbjct: 193 MNTPVLMSPSAMRGTGQIPKFKEDMFYC--------EKDDMYLAPTAEVPVTNLLGGEIL 244

Query: 354 SYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
               LP+    F   +R E   +     GL+R   F + +   F      ++E  K+ N 
Sbjct: 245 EQGSLPIYYTAFTQCFRREAGSAGRDTRGLIRNHQFEKVEMVKFVEPSTSYDELEKLTNN 304

Query: 411 IISIYKDFGFEKIMVKLSTRPEKR----VGSDALW 441
              I +       +V+L +              +W
Sbjct: 305 AEEILQLLEIPYRVVRLCSGDLGFSSAMTYDIEVW 339


>gi|170751975|ref|YP_001758235.1| alanyl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831]
 gi|205830144|sp|B1M0N0|SYA_METRJ RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|170658497|gb|ACB27552.1| alanyl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831]
          Length = 892

 Score = 59.0 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 66/154 (42%), Gaps = 15/154 (9%)

Query: 53  PVREGSIEI-----ITPEDPRSLAVI-RHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FY 105
            V EG++ +     +  ++ R  A+   HS  H++ EA++ +  +     G ++      
Sbjct: 536 TVEEGTLSLDQPVELKVDNVRRKAIRANHSATHLLHEALRQVLGDHVAQKGSLVSPERLR 595

Query: 106 YDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE------LFESKKEAYKV 159
           +D    +P  +DELA++E     ++ +++P + + ++ + A          E   +  +V
Sbjct: 596 FDISHPKPIEADELARVEDIANAVLLQNAPVVTKLMAVDDAIASGARALFGEKYGDEVRV 655

Query: 160 EILESIPAKENVTLYRQGEW-FDLCRGPHVRSTG 192
            +   +P        R   +  +LC G H   TG
Sbjct: 656 -VSMGLPVDGEAAQPRARNFSVELCGGTHAARTG 688


>gi|89100981|ref|ZP_01173826.1| alanyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
 gi|89084317|gb|EAR63473.1| alanyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
          Length = 877

 Score = 59.0 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/152 (19%), Positives = 61/152 (40%), Gaps = 10/152 (6%)

Query: 55  REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQP 113
            E  +      D R+  +  H+  H++ +A++ +        G ++  D   +DF     
Sbjct: 546 TEAGVTAKVDPDSRNKVIKNHTATHLLHQALKDVLGTHVNQAGSLVGPDRLRFDFSHFGQ 605

Query: 114 FSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTL 173
              DEL +IE+ + E I      + +    ++A+ +        K          + V +
Sbjct: 606 VKEDELEKIEEIVNEKIWSSLNVVIENKGIDEAKAMGAMALFGEKY--------GDVVRV 657

Query: 174 YRQGEW-FDLCRGPHVRSTGQVKKFFKLMKVA 204
            + G++  +LC G HVR+T  +  F  + +  
Sbjct: 658 VQVGDYSLELCGGCHVRNTSAIGLFKIISESG 689


>gi|114562974|ref|YP_750487.1| seryl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
 gi|122299903|sp|Q083B6|SYS_SHEFN RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|114334267|gb|ABI71649.1| seryl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
          Length = 428

 Score = 59.0 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 40/247 (16%), Positives = 85/247 (34%), Gaps = 23/247 (9%)

Query: 222 GTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDL--FHIAEDGSGVIFWHRKG--WKIF 276
           G   N   E+ ++        E +DH  L   ++   F  A   SG  F   +G   ++ 
Sbjct: 114 GADENDNVEVRRWGTPKVFDFEVKDHIDLGEALEGLDFKNAVKISGSRFIIMRGQIARLN 173

Query: 277 QTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTF 334
           + L  +M      +  Y E   P ++++     +G    +  ++F  K A    ++ +  
Sbjct: 174 RALGQFMLDLHTTEHGYTETYVPLLVNEESLLGTGQLPKFGEDLFHTKPA---TEEGQGL 230

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGF----- 386
           +L P             +    ELP+++      +R+E         G++R+  F     
Sbjct: 231 SLIPTAEVPLTNYVRDMIVDETELPMKMTALTPCFRSEAGSYGRDTRGVIRLHQFDKVEL 290

Query: 387 --TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
                  H     E + +   K+  L+   Y+        +   +     +    +W  A
Sbjct: 291 VQIAHPDHSMQALEDITSHAEKVLQLLNLPYRTMVLCTGDMGFGSSKTFDI---EVWLPA 347

Query: 445 ENIMKGV 451
           +N  + +
Sbjct: 348 QNTYREI 354


>gi|299530963|ref|ZP_07044376.1| alanyl-tRNA synthetase [Comamonas testosteroni S44]
 gi|298720920|gb|EFI61864.1| alanyl-tRNA synthetase [Comamonas testosteroni S44]
          Length = 874

 Score = 59.0 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 56/142 (39%), Gaps = 9/142 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFS 115
            ++E       R+  +  HS  HIM +A++ +        G  +  +   +DF    P +
Sbjct: 546 DAVEAQVDTAVRAATMRNHSVTHIMHKALREVLGGHVQQKGSLVNAERTRFDFAHNAPVT 605

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           ++++ +IE ++   +  +        +   AR +     +     +L      E V +  
Sbjct: 606 AEQIREIEARVNAEVLAN--------TATDARVMDIESAQKTGAMMLFGEKYGETVRVLD 657

Query: 176 QGEWFDLCRGPHVRSTGQVKKF 197
            G   +LC G HV  TG +  F
Sbjct: 658 IGSSRELCGGTHVSRTGDIGLF 679


>gi|295798138|emb|CAX68980.1| Seryl-tRNA synthetase [uncultured bacterium]
          Length = 423

 Score = 59.0 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 75/212 (35%), Gaps = 17/212 (8%)

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQ 277
           G     +             + +DH +LA  +D+          GS  + +  +G  + +
Sbjct: 114 GAPSANRVVKEVGNKPQFSFKPKDHIELASSLDIIDFERGAKLAGSNFVLYKGQGALLER 173

Query: 278 TLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFA 335
            LI++M +    +  Y+E+  P +++      +G   +   +M+ +K  D          
Sbjct: 174 ALINFMLQVHTTEHGYKEMWPPVLVNPDSMFGTGQLPNLEEDMYKLKNDD--------LY 225

Query: 336 LKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAH 392
           L P        ++   +     LP ++  + S +R E         GL+R+  F + +  
Sbjct: 226 LIPTAEVPLTNIYREEILDEEVLPHKITAYSSCFRREAGSYGKDTRGLVRLHQFDKVELV 285

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIM 424
            F   E  +NE   + +    I         +
Sbjct: 286 KFVKPEDSYNELELLLSDACDILDKLKLPYRI 317


>gi|264678535|ref|YP_003278442.1| alanyl-tRNA synthetase [Comamonas testosteroni CNB-2]
 gi|262209048|gb|ACY33146.1| alanyl-tRNA synthetase [Comamonas testosteroni CNB-2]
          Length = 834

 Score = 59.0 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 56/142 (39%), Gaps = 9/142 (6%)

Query: 57  GSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFS 115
            ++E       R+  +  HS  HIM +A++ +        G  +  +   +DF    P +
Sbjct: 506 DAVEAQVDTAVRAATMRNHSVTHIMHKALREVLGGHVQQKGSLVNAERTRFDFAHNAPVT 565

Query: 116 SDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYR 175
           ++++ +IE ++   +  +        +   AR +     +     +L      E V +  
Sbjct: 566 AEQIREIEARVNAEVLAN--------TATDARVMDIESAQKTGAMMLFGEKYGETVRVLD 617

Query: 176 QGEWFDLCRGPHVRSTGQVKKF 197
            G   +LC G HV  TG +  F
Sbjct: 618 IGSSRELCGGTHVSRTGDIGLF 639


>gi|167752847|ref|ZP_02424974.1| hypothetical protein ALIPUT_01108 [Alistipes putredinis DSM 17216]
 gi|167659916|gb|EDS04046.1| hypothetical protein ALIPUT_01108 [Alistipes putredinis DSM 17216]
          Length = 423

 Score = 59.0 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/240 (13%), Positives = 79/240 (32%), Gaps = 21/240 (8%)

Query: 220 IYGTAWNTQQELTQYLYFLEESEKR-DHRKLAREMDLFHIAE----DGSGVIFWHRKGWK 274
             G        +     + +  E    H +LAR+ D+          G+G   +  +G +
Sbjct: 116 PEGKTAEDNLVVKLVESYTQLPENPLPHWELARKYDIIDFDLGVKLTGAGFPVYKGQGAR 175

Query: 275 IFQTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           + + LI++ +    +  Y E+  P ++++           +       K           
Sbjct: 176 LQRALINFFLDCNTRAGYLEVEPPVMVNE--------ASGFGTGQLPDKEGQMYHATADN 227

Query: 334 FALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDD 390
           F L P        ++   +   ++ PV++  +   +R E       + GL R+  F + +
Sbjct: 228 FYLVPTAEVPVTNIYRDVILDEKDFPVKMTAYTPCFRREAGSYGKDVRGLNRLHQFDKVE 287

Query: 391 AHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAEN 446
                  E+ +     +   + SI K       +++L                ++ +A+ 
Sbjct: 288 IVQLSLPEKSYEALDGMVAHVESIVKALELPYRILRLCGGDMSFTSALTYDFEVYSEAQK 347


>gi|56421091|ref|YP_148409.1| alanyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
 gi|81557818|sp|Q5KWU5|SYA_GEOKA RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|56380933|dbj|BAD76841.1| alanyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
          Length = 887

 Score = 59.0 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/144 (20%), Positives = 56/144 (38%), Gaps = 10/144 (6%)

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDELAQ 121
             E  R   V  H+  H++ +A++ +        G  +  D   +DF        +EL +
Sbjct: 563 VDEAKRMRIVKNHTATHLLHQALKDVLGRHVNQAGSLVAPDRLRFDFTHFGQVKPEELER 622

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-F 180
           IE  + E I +  P    Y   E+A+ +        K          + V + + G++  
Sbjct: 623 IEAIVNEQIWKSLPVDIFYKPLEEAKAMGAMALFGEKY--------GDIVRVVKVGDYSL 674

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVA 204
           +LC G HV +T  +  F  + +  
Sbjct: 675 ELCGGCHVPNTSAIGLFKIVSESG 698


>gi|113969471|ref|YP_733264.1| alanyl-tRNA synthetase [Shewanella sp. MR-4]
 gi|123130634|sp|Q0HL60|SYA_SHESM RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|113884155|gb|ABI38207.1| alanyl-tRNA synthetase [Shewanella sp. MR-4]
          Length = 874

 Score = 59.0 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/141 (19%), Positives = 55/141 (39%), Gaps = 10/141 (7%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSD 117
           +E    +  R    + HS  H++  A++ +        G +++     +DF   +     
Sbjct: 546 LEAKVDKKLRHRTQLNHSVTHLLHAALRQVLGTHVTQKGSLVDPERLRFDFSHFEAVKPA 605

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           EL Q+E+ +   I R+       ++ ++A+E         K            V +   G
Sbjct: 606 ELKQVEELVNTQIRRNHELKVAEMAIDEAKEKGAMALFGEKY--------DAQVRVVTMG 657

Query: 178 EW-FDLCRGPHVRSTGQVKKF 197
           ++  +LC G HV  TG +  F
Sbjct: 658 DFSIELCGGTHVGRTGDIGLF 678


>gi|114046704|ref|YP_737254.1| alanyl-tRNA synthetase [Shewanella sp. MR-7]
 gi|123030800|sp|Q0HXF8|SYA_SHESR RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|113888146|gb|ABI42197.1| alanyl-tRNA synthetase [Shewanella sp. MR-7]
          Length = 874

 Score = 59.0 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/141 (19%), Positives = 55/141 (39%), Gaps = 10/141 (7%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSD 117
           +E    +  R    + HS  H++  A++ +        G +++     +DF   +     
Sbjct: 546 LEAKVDKKLRHRTQLNHSVTHLLHAALRQVLGTHVTQKGSLVDPERLRFDFSHFEAVKPA 605

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           EL Q+E+ +   I R+       ++ ++A+E         K            V +   G
Sbjct: 606 ELKQVEELVNTQIRRNHELKVAEMAIDEAKEKGAMALFGEKY--------DAQVRVVTMG 657

Query: 178 EW-FDLCRGPHVRSTGQVKKF 197
           ++  +LC G HV  TG +  F
Sbjct: 658 DFSIELCGGTHVGRTGDIGLF 678


>gi|117919577|ref|YP_868769.1| alanyl-tRNA synthetase [Shewanella sp. ANA-3]
 gi|205830207|sp|A0KU94|SYA_SHESA RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|117611909|gb|ABK47363.1| alanyl-tRNA synthetase [Shewanella sp. ANA-3]
          Length = 874

 Score = 59.0 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/141 (19%), Positives = 55/141 (39%), Gaps = 10/141 (7%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSD 117
           +E    +  R    + HS  H++  A++ +        G +++     +DF   +     
Sbjct: 546 LEAKVDKKLRHRTQLNHSVTHLLHAALRQVLGTHVTQKGSLVDPERLRFDFSHFEAVKPA 605

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           EL Q+E+ +   I R+       ++ ++A+E         K            V +   G
Sbjct: 606 ELKQVEELVNTQIRRNHELKVAEMAIDEAKEKGAMALFGEKY--------DAQVRVVTMG 657

Query: 178 EW-FDLCRGPHVRSTGQVKKF 197
           ++  +LC G HV  TG +  F
Sbjct: 658 DFSIELCGGTHVGRTGDIGLF 678


>gi|300853245|ref|YP_003778229.1| seryl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
 gi|300433360|gb|ADK13127.1| seryl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
          Length = 426

 Score = 59.0 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 35/236 (14%), Positives = 81/236 (34%), Gaps = 22/236 (9%)

Query: 220 IYGTAWNTQQELTQYLYFLEES-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWK 274
             G +     E+ ++    +   + + H  +  ++D+          GS   F+   G K
Sbjct: 115 PEGKSDEDNVEIRKWSEPTKFDFKPKAHWDIGTDLDILDFERGGKVSGSRFTFYKGLGAK 174

Query: 275 IFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           + + +I+Y      +   Y EI  P ++++     +G    +  + F +   D       
Sbjct: 175 LERAIITYYLDFHTEKHGYTEILPPYMVNRTSMTGTGQLPKFEEDAFRISNND------- 227

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQD 389
            + L P             +     LP++   + + +R E   +     G++R   F + 
Sbjct: 228 -YFLIPTAEVPVTNFHRDEVLKGENLPLKYVAYSACFRAEAGSAGRDTRGIIRQHQFNKV 286

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALW 441
           +   F   E+ ++E  K+ N    + K       +V++                +W
Sbjct: 287 EMVKFTKPEESYDELEKLTNDAEDVLKGLKIPYRVVRICKGDLGFTAALKYDIEVW 342


>gi|285018475|ref|YP_003376186.1| seryl-tRNA synthetase (serine--tRNA ligase) (serrs) protein
           [Xanthomonas albilineans GPE PC73]
 gi|283473693|emb|CBA16196.1| probable seryl-trna synthetase (serine--trna ligase) (serrs)
           protein [Xanthomonas albilineans]
          Length = 437

 Score = 59.0 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/188 (12%), Positives = 63/188 (33%), Gaps = 15/188 (7%)

Query: 273 WKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M         Y+E N P +++      +G    +  +MFA       + +
Sbjct: 182 ARLHRALAQFMLDLHTGPHAYQETNVPVIVNADSLYGTGQLPKFEEDMFAT-----ALGE 236

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
            + + +   +      +    +     LP+R+      +R+E         G++R   F 
Sbjct: 237 QKRYLIS-TSEISLTNLVRDEIVEAERLPLRMTAHSLCFRSEAGSGGRDTRGMIRQHQFE 295

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +    C  E+   E  ++      + +  G     + L +              +W  
Sbjct: 296 KVELVSVCRPEESAAEHERMTRCAEVVLETLGLPYRKMLLCSGDMGFSASKTYDLEVWLP 355

Query: 444 AENIMKGV 451
           ++   + +
Sbjct: 356 SQQTFREI 363


>gi|319400957|gb|EFV89176.1| histidyl-tRNA synthetase [Staphylococcus epidermidis FRI909]
          Length = 424

 Score = 59.0 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 40/87 (45%)

Query: 557 VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASE 616
           V T+   A  YA ++ N L+ + + ++ D+ N  I  ++++         ++ GD+E   
Sbjct: 334 VVTMGEDADRYAVKLINDLRRNGIKVDKDYLNRKIKGQMKQADRLNAKYTVVIGDQELEN 393

Query: 617 RSIGIRRFGSTTTQKVSLLDAIPILTK 643
             IG++   S  T+ V L + I     
Sbjct: 394 NEIGVKNMISGETENVQLDELINYFKN 420


>gi|281208581|gb|EFA82757.1| glycyl-tRNA synthetase [Polysphondylium pallidum PN500]
          Length = 643

 Score = 59.0 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/142 (17%), Positives = 50/142 (35%), Gaps = 15/142 (10%)

Query: 515 SEKCHPVMIHRAVFGSIERFIGIMIEN-----------FKGNLPLWLSPIQAIVTTI--T 561
            E   P +I       + R I  +IE+              +LP  ++P++A +  +   
Sbjct: 483 GESYQPHVI--EPSFGLGRIIYSLIEHAYWVREGDEQRCVLSLPAIIAPVKASILPLIGN 540

Query: 562 SSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGI 621
           +    +   I  LLK   +S + D     I  +        IP  I        + ++ +
Sbjct: 541 AELAPFVHRINRLLKEAGISCKVDDSGSAIGRRYARTDEIGIPFGITIDFDTLKDDTVTL 600

Query: 622 RRFGSTTTQKVSLLDAIPILTK 643
           R   +T   ++ + D    L +
Sbjct: 601 RERDTTKQVRIPISDVTQTLKQ 622



 Score = 42.5 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 2/70 (2%)

Query: 335 ALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
            L+P    G    F   L  +   LP   A+ G+ +RNE +    GL+RVR FT  +   
Sbjct: 208 YLRPETAQGIFVNFRRLLDFNGSRLPFAAAQIGNSFRNEIAPR-SGLLRVREFTMAEIEH 266

Query: 394 FCTKEQMFNE 403
           F   ++  + 
Sbjct: 267 FVHPDRKAHP 276


>gi|242242903|ref|ZP_04797348.1| histidyl-tRNA synthetase [Staphylococcus epidermidis W23144]
 gi|242233618|gb|EES35930.1| histidyl-tRNA synthetase [Staphylococcus epidermidis W23144]
          Length = 424

 Score = 59.0 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 40/87 (45%)

Query: 557 VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASE 616
           V T+   A  YA ++ N L+ + + ++ D+ N  I  ++++         ++ GD+E   
Sbjct: 334 VVTMGEDADRYAVKLINDLRRNGIKVDKDYLNRKIKGQMKQADRLNAKYTVVIGDQELEN 393

Query: 617 RSIGIRRFGSTTTQKVSLLDAIPILTK 643
             IG++   S  T+ V L + I     
Sbjct: 394 NEIGVKNMISGETENVQLDELINYFKN 420


>gi|238019657|ref|ZP_04600083.1| hypothetical protein VEIDISOL_01531 [Veillonella dispar ATCC 17748]
 gi|237863698|gb|EEP64988.1| hypothetical protein VEIDISOL_01531 [Veillonella dispar ATCC 17748]
          Length = 426

 Score = 59.0 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 38/246 (15%), Positives = 82/246 (33%), Gaps = 21/246 (8%)

Query: 219 RIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDL--FHIAEDGSGVIF--WHRKGWK 274
            +        ++         + + + H  L   +D+  F+ A   SG  F  +   G +
Sbjct: 112 PVGADEDENVEQRKWGEPRQFDFDIQAHWDLGENLDILDFNRAGKMSGARFTVYKGLGAR 171

Query: 275 IFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           + + LI++M     D   Y E+ TP ++ +     +G    +  +M+ V+          
Sbjct: 172 LERALINFMVDLHVDKQGYTEMMTPYMVTRETLTGTGQLPKFAEDMYHVED--------T 223

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQD 389
            + L P          +  + S  ELP     F + +R E   +     GL+R   F + 
Sbjct: 224 EYFLIPTAEVTLTNYHSGEILSEEELPKYYTAFTACFRAEAGSAGRDTRGLIRQHQFNKV 283

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYK----DFGFEKIMVKLSTRPEKRVGSDALWDDAE 445
           +       E  + E   + +    + +     F    +          +     +W  A+
Sbjct: 284 EMVKLAKPEDSYKELETLTDNAEEVLRLLELPFRVITLCTGDIGFGSAKTYDVEVWMPAQ 343

Query: 446 NIMKGV 451
              + +
Sbjct: 344 GKYREI 349


>gi|298529911|ref|ZP_07017313.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfonatronospira thiodismutans
           ASO3-1]
 gi|298509285|gb|EFI33189.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfonatronospira thiodismutans
           ASO3-1]
          Length = 720

 Score = 59.0 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%)

Query: 10  PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREG-SIEIITP 64
           P G +K  P  AT  D A  I   +  +     +NGK+  L+  ++ G ++EIIT 
Sbjct: 394 PRGEVKELPEGATPIDFAYMIHTEVGDRCAGAKVNGKLVPLNTVLKNGDTVEIITD 449


>gi|217979627|ref|YP_002363774.1| alanyl-tRNA synthetase [Methylocella silvestris BL2]
 gi|217505003|gb|ACK52412.1| alanyl-tRNA synthetase [Methylocella silvestris BL2]
          Length = 895

 Score = 59.0 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/144 (19%), Positives = 60/144 (41%), Gaps = 9/144 (6%)

Query: 58  SIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSS 116
           ++E+      RS     HS  H++ E+++ +  +     G  + +D   +DF   +P S 
Sbjct: 547 ALELSVDHARRSAIRANHSATHLLHESLRLVLGDHVAQKGSLVADDRLRFDFTHLKPISP 606

Query: 117 DELAQIEKKMQEIIARDSPFLKQYLSHEKARE------LFESKKEAYKVEILESIPAKEN 170
           +EL ++E      +  ++P + + ++ ++A          E   +  +V  +     +E+
Sbjct: 607 EELTRVEDIANRAVTDNAPVVTRLMAVDEAIASGARALFGEKYGDEVRVVTMGYAQDRED 666

Query: 171 VTLYRQGE--WFDLCRGPHVRSTG 192
                       +LC G HV  TG
Sbjct: 667 SGDGGANRAFSVELCGGTHVARTG 690


>gi|156552806|ref|XP_001599572.1| PREDICTED: similar to seryl-tRNA synthetase [Nasonia vitripennis]
          Length = 494

 Score = 59.0 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/218 (13%), Positives = 69/218 (31%), Gaps = 17/218 (7%)

Query: 214 RPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIF----WH 269
             +   +  +    + ++ +      + +K  H  L     +  +  +    +     + 
Sbjct: 139 NHLHQSVPVSNDEEENKVERTFGDTTQRKKYSHVDLI--HMIDGMDGERGAAVSGGRGYF 196

Query: 270 RKGWKIFQT---LISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADD 326
             G  +F     +   +R+     Y+ + TP  + +   Q+      +   ++ V     
Sbjct: 197 LTGAAVFLEHALIQLALRKLFDKGYKPLYTPFFMRKDAMQEVAQLSQFDEELYKVIGKGS 256

Query: 327 TIKDLRTFALKP---MNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGL 380
              D +    K     +     A           LP+R A   + +R E         G+
Sbjct: 257 EKGDEKELEEKYLIATSEQPIAAYHRGEWIPEATLPIRYAGLSTCFRQEVGSHGRDTRGI 316

Query: 381 MRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDF 418
            RV  F + +   FC      N+  ++   +I   +DF
Sbjct: 317 FRVHQFEKVEQ--FCLTSPHDNKSWEMMEEMIRNAEDF 352


>gi|261749137|ref|YP_003256822.1| alanyl-tRNA synthetase [Blattabacterium sp. (Periplaneta americana)
           str. BPLAN]
 gi|261497229|gb|ACX83679.1| alanyl-tRNA synthetase [Blattabacterium sp. (Periplaneta americana)
           str. BPLAN]
          Length = 887

 Score = 59.0 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 32/151 (21%), Positives = 70/151 (46%), Gaps = 10/151 (6%)

Query: 59  IEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSD 117
            + I  ++ R      H+  H++  +++ I  E     G  + ED   +DF   +  + +
Sbjct: 554 FQAIVNKNRRKKIEKNHTSTHLLHFSLKKILGEHIQQKGSYVGEDYLRFDFSHPKKITIE 613

Query: 118 ELAQIEKKMQEIIARDSPFL-KQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQ 176
           EL QIE+ +Q++I  + P   ++ +  ++A +   +     K E        + V     
Sbjct: 614 ELFQIEEMVQKLIFSNLPLEERRSIPLQEAIKKGYNGIFYEKYE--------KEVRGITF 665

Query: 177 GEWFDLCRGPHVRSTGQVKKFFKLMKVAGAY 207
           G+  +LC G H ++TG ++ F  + +++ +Y
Sbjct: 666 GDSSELCIGTHAKNTGCIQVFSIVSELSVSY 696


>gi|261418428|ref|YP_003252110.1| alanyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|319767612|ref|YP_004133113.1| alanyl-tRNA synthetase [Geobacillus sp. Y412MC52]
 gi|261374885|gb|ACX77628.1| alanyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|317112478|gb|ADU94970.1| alanyl-tRNA synthetase [Geobacillus sp. Y412MC52]
          Length = 878

 Score = 59.0 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/144 (20%), Positives = 56/144 (38%), Gaps = 10/144 (6%)

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDELAQ 121
             E  R   V  H+  H++ +A++ +        G  +  D   +DF        +EL +
Sbjct: 554 VDEAKRMRIVKNHTATHLLHQALKDVLGRHVNQAGSLVAPDRLRFDFTHFGQVKPEELER 613

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-F 180
           IE  + E I +  P    Y   E+A+ +        K          + V + + G++  
Sbjct: 614 IEAIVNEQIWKSLPVDIFYKPLEEAKAMGAMALFGEKY--------GDIVRVVKVGDYSL 665

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVA 204
           +LC G HV +T  +  F  + +  
Sbjct: 666 ELCGGCHVPNTSAIGLFKIVSESG 689


>gi|154250193|ref|YP_001411018.1| seryl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
 gi|171769398|sp|A7HN78|SYS_FERNB RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|154154129|gb|ABS61361.1| seryl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
          Length = 426

 Score = 59.0 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 54/358 (15%), Positives = 112/358 (31%), Gaps = 31/358 (8%)

Query: 105 YYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILES 164
           +Y+  K++ +S+D + +I    +E   + +          +  +L    K   K +  E 
Sbjct: 14  FYEALKKRNYSTDIIDEIVNLDKEWRNQLNIVNNLKAKRNELSKLVARYKAEGKNQEAEE 73

Query: 165 IPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVAGAY---WRGDSNRPMLSRIY 221
           I A+      + GE      G       ++      +            D    +  R +
Sbjct: 74  IIAESK----KIGEEIAQYEGKQKELEEKMYNLALYIPNPPHESVPVGKDETENVEIRRW 129

Query: 222 GTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLIS 281
           G       E   +     E    D  + ++          G+          K+ + +  
Sbjct: 130 GEPRKFDFEPKAHWDLGPELGMLDFDRGSKLSGSRFTVMFGAI--------AKLERAIAQ 181

Query: 282 YMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMN 340
           +M     K+ Y E+N P ++ +     +G    +   ++          +     L P  
Sbjct: 182 FMLDVHTKNGYIEVNVPHLVKRETITATGQLPKFSEELYTC--------ERDDLFLIPTA 233

Query: 341 CPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTK 397
                A+    +    +LP +   F   YR E       + GL+R   F + +   + T 
Sbjct: 234 EVSLAALHIDEILEENKLPKKYTAFTPCYRREAGSYGKDVRGLIRQHQFEKVELVWYTTP 293

Query: 398 EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALWDDAENIMKGV 451
           E+ F +  ++      I +  G    +V L T              +W  + N  K +
Sbjct: 294 ERSFEDLEQLTQDAERILQLLGLPYRVVTLCTGDLGFAAAKTYDIEVWLPSYNSYKEI 351


>gi|90413226|ref|ZP_01221221.1| seryl-tRNA synthetase [Photobacterium profundum 3TCK]
 gi|90325778|gb|EAS42236.1| seryl-tRNA synthetase [Photobacterium profundum 3TCK]
          Length = 430

 Score = 59.0 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/188 (12%), Positives = 61/188 (32%), Gaps = 12/188 (6%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + +  +M     +   Y E+  P +++      +G    +  ++F  K A    ++
Sbjct: 172 ARLHRAIAQFMLDLHTEEHGYTEMYVPYLVNADSLFGTGQLPKFGEDLFHTKPA---TEE 228

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
               +L P        +    +    +LP+++      +R+E         GL+R+  F 
Sbjct: 229 GVGMSLIPTAEVPVTNMVRDTITDEADLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFD 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E       ++      + +        V L T              +W  
Sbjct: 289 KVELVQITKPEDSMAALEELTGHAEKVLQLLELPYRKVILCTGDMGFGAAKTYDLEVWVP 348

Query: 444 AENIMKGV 451
           A+   + +
Sbjct: 349 AQETYREI 356


>gi|42521723|ref|NP_967103.1| seryl-tRNA synthetase [Bdellovibrio bacteriovorus HD100]
 gi|67461781|sp|Q6MRK1|SYS_BDEBA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|39574253|emb|CAE77757.1| serS [Bdellovibrio bacteriovorus HD100]
          Length = 431

 Score = 59.0 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 32/242 (13%), Positives = 80/242 (33%), Gaps = 25/242 (10%)

Query: 219 RIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQT 278
           ++ GT      +  ++    E     D  +  +          G+          ++ + 
Sbjct: 132 KVVGTPTQFSFKAKEHWELGEALNIIDFERAGKTTGTRFAFLKGAA--------AQMERA 183

Query: 279 LISYMRRK--IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFAL 336
           LI +M  K  +K  Y E+  P +++ +    +G++  ++ ++F +        +     L
Sbjct: 184 LIQFMMDKHSMKHGYTEMIPPFMVNSNSLLGTGNFPKFKEDVFHL--------EGSDLYL 235

Query: 337 KPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGF----TQD 389
            P         +N+ +   ++LP     +   +R+E   +     GL+R   F       
Sbjct: 236 IPTAEVPVTNYYNNEILDEKDLPQSFCAYSPCFRSEAGSAGRDTKGLIRQHQFDKVELMV 295

Query: 390 DAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAENIMK 449
            AH   + E           +++ +   F    +          +     +W   +N  +
Sbjct: 296 FAHPDKSHEVHEALTSHAEQILMDLELPFRRVLLCTGDMGFGSAKTYDLEVWLPGQNAYR 355

Query: 450 GV 451
            +
Sbjct: 356 EI 357


>gi|29347250|ref|NP_810753.1| histidyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
 gi|253571985|ref|ZP_04849390.1| histidyl-tRNA synthetase [Bacteroides sp. 1_1_6]
 gi|32130101|sp|Q8A6N7|SYH_BACTN RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|29339149|gb|AAO76947.1| histidyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
 gi|251838582|gb|EES66668.1| histidyl-tRNA synthetase [Bacteroides sp. 1_1_6]
          Length = 454

 Score = 59.0 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/204 (13%), Positives = 71/204 (34%), Gaps = 19/204 (9%)

Query: 442 DDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFN 501
           +++E I+ G L+T+   ++  ++  +  G   + G  FE    D        G      N
Sbjct: 268 EESEFIL-GTLETMGLKNEIELDLTLARGLNYYTGAIFEVKALDVQIGSITGGGR--YDN 324

Query: 502 LPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM--IENFKGNLPLWLSPIQAIVTT 559
           L   F    V+              +    +R   ++  +E +       ++  + +   
Sbjct: 325 LTGVFGMAGVSGVG-----------ISFGADRIFDVLNQLELYPKEA---VNGTELMFVN 370

Query: 560 ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSI 619
                  ++  +   +++  +  E       +  ++   + K +P + I G+ E +E   
Sbjct: 371 FGDKEAAFSMSMLAKVRAAGIRAEIFPDAAKMKKQMSYANAKSVPFVAIVGENEMNEGKA 430

Query: 620 GIRRFGSTTTQKVSLLDAIPILTK 643
            ++   +     VS+ + I  L  
Sbjct: 431 MLKNMETGEQNLVSVEELIAALRN 454


>gi|319778381|ref|YP_004129294.1| Seryl-tRNA synthetase [Taylorella equigenitalis MCE9]
 gi|317108405|gb|ADU91151.1| Seryl-tRNA synthetase [Taylorella equigenitalis MCE9]
          Length = 459

 Score = 59.0 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 40/244 (16%), Positives = 80/244 (32%), Gaps = 35/244 (14%)

Query: 242 EKRDHRKLAREMDL-FHIAEDGSGVIF-WHRKGW--KIFQTLISYMRRKI--KDDYEEIN 295
           E +DH  L   + L F  A   +G  F +  KG   ++ + L  +M      +  Y E  
Sbjct: 145 EVKDHVTLGEPLGLDFDCAIKLTGSRFSFM-KGAVARMHRALAQFMLNTHTSEHGYTECY 203

Query: 296 TPQVLDQHLWQQSGHWDSYRANMFAVKCADD---------------------TIKDLRTF 334
           TP +++      +G    ++ +MF V    +                     T +     
Sbjct: 204 TPYIVNSSTLFGTGQLPKFKEDMFWVIKGGEGLDPEAKTDSEDSSLGASGATTSEQKEDL 263

Query: 335 ALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDA 391
            L   +         + +    ELP+RL      +R+E         G++R   F + + 
Sbjct: 264 YLISTSEITLTGTVKNSIVVETELPIRLTAHSPCFRSEAGSGGRDTRGIIRQHQFDKVEM 323

Query: 392 HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENI 447
                 E+ +    ++      I +       +V+L T              +W  ++N 
Sbjct: 324 VQIAHPEKSYEALEEMLGHAEKILQALALPYRVVQLCTGDMGFSAAKTYDLEVWVPSQNT 383

Query: 448 MKGV 451
            + +
Sbjct: 384 FREI 387


>gi|297529280|ref|YP_003670555.1| alanyl-tRNA synthetase [Geobacillus sp. C56-T3]
 gi|297252532|gb|ADI25978.1| alanyl-tRNA synthetase [Geobacillus sp. C56-T3]
          Length = 878

 Score = 59.0 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/144 (20%), Positives = 56/144 (38%), Gaps = 10/144 (6%)

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDELAQ 121
             E  R   V  H+  H++ +A++ +        G  +  D   +DF        +EL +
Sbjct: 554 VDEAKRMRIVKNHTATHLLHQALKDVLGRHVNQAGSLVAPDRLRFDFTHFGQVKPEELER 613

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-F 180
           IE  + E I +  P    Y   E+A+ +        K          + V + + G++  
Sbjct: 614 IEAIVNEQIWKSLPVDIFYKPLEEAKAMGAMALFGEKY--------GDIVRVVKVGDYSL 665

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVA 204
           +LC G HV +T  +  F  + +  
Sbjct: 666 ELCGGCHVPNTSAIGLFKIVSESG 689


>gi|291002089|ref|XP_002683611.1| seryl-tRNA synthetase [Naegleria gruberi]
 gi|284097240|gb|EFC50867.1| seryl-tRNA synthetase [Naegleria gruberi]
          Length = 489

 Score = 59.0 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 55/323 (17%), Positives = 117/323 (36%), Gaps = 16/323 (4%)

Query: 118 ELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQG 177
           +L Q+ K  ++ I  D  + +     ++  E    K+ + +V I      KE++   +  
Sbjct: 57  DLDQVLKNYEQYIQIDQEYEQVQYLRKEIAEYLAGKRTSEQVPIEIKNLIKEDLENKKAD 116

Query: 178 EW--FDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYL 235
            W          +++  ++K               +     + +      N    +    
Sbjct: 117 SWKVIGKEFKTKIQNLEKIKNEVYQELCEKTVKLPNFTEEGVMKFSKENSNQPNLVKYVG 176

Query: 236 YFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRK--GWKIFQTLISY-MRRKIKDDYE 292
              E   K  H ++  ++DLF  A + SG  F+  K  G  +   L ++ + + +K  ++
Sbjct: 177 EKKETIPKLSHYEICEKLDLFEPANECSGSKFFFLKNEGVLLEVALQNFAISKLLKRGFK 236

Query: 293 EINTPQVLDQHLWQQSGHWDS------YRANMFAVK--CADDTIKDLRTFALKPMNCPGH 344
            I  P+++ Q + +  G          YR      +     +      +  L   +  G 
Sbjct: 237 IIMPPELMKQSIVEGCGFQPRGEHSQIYRIENSNQEPTTTKNGETCNDSLCLIGTSEIGL 296

Query: 345 VAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMF 401
            A+  +      + P++ A     +R E   +     GL RV  FT+ +  V+C  EQ  
Sbjct: 297 AALHCNEFMPNFKGPLKYAGLSHCFRTEAGAAGSKDRGLYRVHQFTKVEMFVYCEPEQSE 356

Query: 402 NECLKIHNLIISIYKDFGFEKIM 424
               +I ++   I+ + GF   +
Sbjct: 357 ALLDEIVSIQEEIFSELGFHFQI 379


>gi|229105022|ref|ZP_04235676.1| Alanyl-tRNA synthetase [Bacillus cereus Rock3-28]
 gi|228678399|gb|EEL32622.1| Alanyl-tRNA synthetase [Bacillus cereus Rock3-28]
          Length = 880

 Score = 59.0 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 65/161 (40%), Gaps = 15/161 (9%)

Query: 44  NGK-----VCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP 98
           NG+     V +     +  +++ +     RS  V  H+  H++ +A++ +        G 
Sbjct: 531 NGQNLHKVVVEEGTLTKGAAVKAVIDTKNRSSVVKNHTATHLLHQALKDVLGTHVNQAGS 590

Query: 99  -IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAY 157
            +  +   +DF       +DEL +IE+ + E I           S E+A+E+        
Sbjct: 591 LVTSERLRFDFSHFGQVQADELEKIERIVNEKIWESINVEISQKSIEEAKEMGAMALFGE 650

Query: 158 KVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
           K          + V + + G++  +LC G HV +T  +  F
Sbjct: 651 KY--------GDVVRVVQVGDYSLELCGGCHVDNTASIGIF 683


>gi|219666079|ref|YP_002456514.1| seryl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
 gi|254783022|sp|B8FXX3|SYS_DESHD RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|219536339|gb|ACL18078.1| seryl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
          Length = 421

 Score = 59.0 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 54/342 (15%), Positives = 108/342 (31%), Gaps = 43/342 (12%)

Query: 119 LAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKE-AYKVEILESIPAKENVTLYRQG 177
           L ++E    +         ++    E A +L    +E   KV+ LE     + +    Q 
Sbjct: 41  LFEVESLKAQRNTVSEEVGRRKKHGEDAEQLILEMREVGQKVKNLE-----DKLGEIEQS 95

Query: 178 EWFDLCRGPHVRSTGQVKKFFKLMKVAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYF 237
               L   P++          +   V    W             GT  +   E   +   
Sbjct: 96  MEAVLYEIPNIPHESVPVGADEEANVEVRTW-------------GTPRSFDFEPLAHYEI 142

Query: 238 LEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYM-RRKIKDDYEEINT 296
            E+ +  D  +  +               F+   G K+ + LIS+M  R     Y E+  
Sbjct: 143 GEKLDILDFARAGKVTGARFT--------FYKGLGAKLERALISFMLDRHSAKGYVEVLP 194

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P ++ ++    +G    +  + F V            + L P        ++   +    
Sbjct: 195 PYMVHRNSMIGTGQLPKFEEDAFKV--------AGTDYFLIPTAEVPVTNMYREEILEAE 246

Query: 357 ELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           +LP+    + + +R E   +     GL+R   F + +   F   E  + E   +     S
Sbjct: 247 QLPIHHCAYSACFRAEAGSAGRDTRGLIRQHQFNKVELVKFAFPENSYEELESLTRDAES 306

Query: 414 IYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
           I ++      ++ LST              +W  + N  + +
Sbjct: 307 ILQELELPYRVMALSTGDLGFTSAKTYDLEVWLPSFNTYREI 348


>gi|315225082|ref|ZP_07866899.1| serine--tRNA ligase [Capnocytophaga ochracea F0287]
 gi|314944765|gb|EFS96797.1| serine--tRNA ligase [Capnocytophaga ochracea F0287]
          Length = 423

 Score = 59.0 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/214 (15%), Positives = 71/214 (33%), Gaps = 20/214 (9%)

Query: 245 DHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQV 299
            H +LA++ DL          G+G   +  KG K+ + LI+Y + +  +  Y E   P V
Sbjct: 142 PHWELAKKYDLIDFELGVKLTGAGFPVYKGKGAKLQRALITYFLDKNTEAGYNEYQVPHV 201

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           +++           Y       K        +    L P        +F   L +  +LP
Sbjct: 202 VNE--------ASGYGTGQLPDKEGQMYHVGVDNLYLIPTAEVPVTNIFRDTLLNESDLP 253

Query: 360 VRLAEFGSVYRNEPSG---SLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           +    +   +R E       + GL R+  F + +       ++ +     +   +  I  
Sbjct: 254 ICCTAYTPCFRREAGSYGAHVRGLNRLHQFDKVEIVRIEHPDRSYKALEGMIEHVKGILN 313

Query: 417 DFGFEKIMVKLSTRPEKR----VGSDALWDDAEN 446
           +      +++L                ++  A+ 
Sbjct: 314 ELKLPYHILRLCGGDLGFTSAITYDFEVYSTAQE 347


>gi|254796550|ref|YP_003081386.1| alanyl-tRNA synthetase [Neorickettsia risticii str. Illinois]
 gi|254589786|gb|ACT69148.1| alanyl-tRNA synthetase [Neorickettsia risticii str. Illinois]
          Length = 848

 Score = 59.0 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 47/124 (37%), Gaps = 9/124 (7%)

Query: 66  DPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDELAQIEK 124
           + R+     HS  H++   ++          G  +  +   +DF   QP + +EL++IE 
Sbjct: 544 NRRNSLARNHSATHVLHHVLRKRLGTHVSQRGSLVTPNRLRFDFSHSQPITEEELSKIED 603

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
            +  +I  D P + +    + A           K          + V +   GE  +LC 
Sbjct: 604 CINLMIWDDHPVITEVKKTDDAIRDGAIGLFGEKY--------DDTVRVVSIGEAVELCG 655

Query: 185 GPHV 188
           G HV
Sbjct: 656 GTHV 659


>gi|313672627|ref|YP_004050738.1| (p)ppgpp synthetase i, spot/rela [Calditerrivibrio nitroreducens
           DSM 19672]
 gi|312939383|gb|ADR18575.1| (p)ppGpp synthetase I, SpoT/RelA [Calditerrivibrio nitroreducens
           DSM 19672]
          Length = 710

 Score = 59.0 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 1/64 (1%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
           +P  I +  P G +   P  +T  D A +I   + +K V   ++GK+ +L   ++ G  +
Sbjct: 386 LPRQIYIFTPKGDVIELPEGSTPIDFAYAIHSKVGEKCVGAKVDGKMVNLKYKLKNGEKV 445

Query: 60  EIIT 63
           EI+T
Sbjct: 446 EIVT 449


>gi|291529066|emb|CBK94652.1| alanyl-tRNA synthetase [Eubacterium rectale M104/1]
          Length = 886

 Score = 59.0 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 54/132 (40%), Gaps = 10/132 (7%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKM 126
           R+     HS  H++ +A++ +        G   + +   +DF      +++EL ++E  +
Sbjct: 566 RTNTCRNHSATHLLQKALREVLGTHVEQAGSYQDAERTRFDFSHFSAMTAEELKRVEDIV 625

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRG 185
            E I          ++ ++A++         K          E V +   G++  + C G
Sbjct: 626 NEKINEAIEVRTDIMTVDEAKKTGAMALFGEKY--------GEKVRVVSMGDFSKEFCGG 677

Query: 186 PHVRSTGQVKKF 197
            HV++T  +K F
Sbjct: 678 THVKNTSDIKVF 689


>gi|282891888|ref|ZP_06300367.1| hypothetical protein pah_c200o037 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281498148|gb|EFB40488.1| hypothetical protein pah_c200o037 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 436

 Score = 59.0 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 66/191 (34%), Gaps = 14/191 (7%)

Query: 243 KRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINTP 297
            ++H +L   ++LF         G+G   +   G ++   L++YM    IK+ +E+   P
Sbjct: 146 FKNHVELNERLELFDFKRGAKISGTGWPVYRGMGARLEWALLNYMIEIHIKNGFEQWIPP 205

Query: 298 QVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRE 357
            ++ + +   SG    +    F +   D          L P        +    +     
Sbjct: 206 ILVRKEILFGSGQLPKFENQQFKINDPDYH------LYLIPTAEVPLNGLHYDEILETDH 259

Query: 358 LPVRLAEFGSVYRNE---PSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISI 414
           LP++   +   +R E         GL+R+  F + +   F   E+      ++      I
Sbjct: 260 LPLKYIAYTPCFRREAGAAGSQERGLIRMHQFNKVEMFCFSKPEESMKLFDQMMASAEEI 319

Query: 415 YKDFGFEKIMV 425
            +        +
Sbjct: 320 LQGLDLHYRNM 330


>gi|238924198|ref|YP_002937714.1| alanyl-tRNA synthetase [Eubacterium rectale ATCC 33656]
 gi|238875873|gb|ACR75580.1| alanyl-tRNA synthetase [Eubacterium rectale ATCC 33656]
          Length = 886

 Score = 59.0 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 54/132 (40%), Gaps = 10/132 (7%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKM 126
           R+     HS  H++ +A++ +        G   + +   +DF      +++EL ++E  +
Sbjct: 566 RTNTCRNHSATHLLQKALREVLGTHVEQAGSYQDAERTRFDFSHFSAMTAEELKRVEDIV 625

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRG 185
            E I          ++ ++A++         K          E V +   G++  + C G
Sbjct: 626 NEKINEAIEVRTDIMTVDEAKKTGAMALFGEKY--------GEKVRVVSMGDFSKEFCGG 677

Query: 186 PHVRSTGQVKKF 197
            HV++T  +K F
Sbjct: 678 THVKNTSDIKAF 689


>gi|297587952|ref|ZP_06946596.1| serine--tRNA ligase [Finegoldia magna ATCC 53516]
 gi|297574641|gb|EFH93361.1| serine--tRNA ligase [Finegoldia magna ATCC 53516]
          Length = 421

 Score = 59.0 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 54/335 (16%), Positives = 110/335 (32%), Gaps = 29/335 (8%)

Query: 125 KMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCR 184
           +  +    + P  K  L  ++ R     K E+ K E  ++  +K+   + + GE      
Sbjct: 16  EALKKRRGEYPIQKL-LDTDEKRREVIQKVESMKAE--QNKLSKQVPQMKKNGEDTTELF 72

Query: 185 GPHVRSTGQVKKFFKLMK----VAGAYWRGDSNRPMLSRIYGTAWNTQQELTQYLYFLEE 240
               + +  +K     +K        Y     N P      G       E+ ++    + 
Sbjct: 73  KNLKKLSDDIKSMDDDLKDIDEEIREYLMEIPNTPNKDVPVGLDDTENLEMRKWGEPRKF 132

Query: 241 S-EKRDHRKLAREMDLFHIAE----DGSGVIFWHRKGWKIFQTLISYMRRKIKD--DYEE 293
             + + H  L  ++D+           S    +  KG ++ + L+++M     D   Y E
Sbjct: 133 DFDIKAHWDLGVDLDILDFERATKISKSRFSVFKGKGARLERALMNFMVDLHTDKQGYTE 192

Query: 294 INTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           +NTP ++       +G    ++ +MF          +     L P        +    + 
Sbjct: 193 MNTPVLMSPSAMMGTGQIPKFKEDMFYC--------EKDDMYLAPTAEVPVTNLLAGEIL 244

Query: 354 SYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
               LP+    F   +R E   +     GL+R   F + +   F      ++E  K+ N 
Sbjct: 245 EQGSLPIYYTAFTQCFRREAGSAGRDTRGLIRNHQFEKVEMVKFVEPSTSYDELEKLTNN 304

Query: 411 IISIYKDFGFEKIMVKLSTRPEKR----VGSDALW 441
              I +       +V+L +              +W
Sbjct: 305 AEEILQLLEIPYRVVRLCSGDLGFSSAMTYDVEVW 339


>gi|229098860|ref|ZP_04229796.1| Alanyl-tRNA synthetase [Bacillus cereus Rock3-29]
 gi|229117885|ref|ZP_04247247.1| Alanyl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|228665542|gb|EEL21022.1| Alanyl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|228684533|gb|EEL38475.1| Alanyl-tRNA synthetase [Bacillus cereus Rock3-29]
          Length = 880

 Score = 59.0 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 65/161 (40%), Gaps = 15/161 (9%)

Query: 44  NGK-----VCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP 98
           NG+     V +     +  +++ +     RS  V  H+  H++ +A++ +        G 
Sbjct: 531 NGQNLHKVVVEEGTLTKGAAVKAVIDTKNRSSVVKNHTATHLLHQALKDVLGTHVNQAGS 590

Query: 99  -IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAY 157
            +  +   +DF       +DEL +IE+ + E I           S E+A+E+        
Sbjct: 591 LVTSERLRFDFSHFGQVQADELEKIERIVNEKIWESINVEISQKSIEEAKEMGAMALFGE 650

Query: 158 KVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
           K          + V + + G++  +LC G HV +T  +  F
Sbjct: 651 KY--------GDVVRVVQVGDYSLELCGGCHVDNTASIGIF 683


>gi|78211740|ref|YP_380519.1| histidyl-tRNA synthetase [Synechococcus sp. CC9605]
 gi|78196199|gb|ABB33964.1| histidyl-tRNA synthetase [Synechococcus sp. CC9605]
          Length = 445

 Score = 59.0 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 14/94 (14%), Positives = 32/94 (34%)

Query: 555 AIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
             +      A   A  +A  L++  L +E D        + +          ++ GD+E 
Sbjct: 352 VFLVNRGDEAECVALALARDLRAAGLRVELDGSGSAFGKQFKRADRSGASWAMVLGDEEV 411

Query: 615 SERSIGIRRFGSTTTQKVSLLDAIPILTKESLPP 648
               + ++R      +    L  +  + ++ L P
Sbjct: 412 ERGEVRLKRLQQQAEESTVALAPVAAIVEKLLTP 445


>gi|77359489|ref|YP_339064.1| alanyl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
 gi|123589570|sp|Q3ILF3|SYA_PSEHT RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|76874400|emb|CAI85621.1| alanyl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
          Length = 868

 Score = 59.0 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 67/167 (40%), Gaps = 18/167 (10%)

Query: 41  VAINGKVCDLSDPVREGSIEIITPEDPRSLAVI-RHSCAHIMAEAVQSIWPEVQVAIGPI 99
             + G++  L+D V        T +D R   +   H+  HI+ E ++ +  E     G +
Sbjct: 527 GIVQGRI-GLNDKVEA------TIDDARRERIKKNHTATHILHETLRQLLGEHVGQKGSL 579

Query: 100 I-EDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYK 158
           +  +   +DF   +  + +EL +IE+ + + I  +     + ++ + A+          K
Sbjct: 580 VQAERLRFDFSHFEAVTKEELREIERVVNDEIRCNFALSTELMAIDDAKAKGAMALFGEK 639

Query: 159 VEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKFFKLMKVA 204
                     + V +   G++  +LC G HV   G +  F  + +  
Sbjct: 640 Y--------DDEVRVVTIGDYSIELCGGTHVERAGDIGLFKIVSESG 678


>gi|269139541|ref|YP_003296242.1| seryl-tRNA synthetase [Edwardsiella tarda EIB202]
 gi|267985202|gb|ACY85031.1| seryl-tRNA synthetase [Edwardsiella tarda EIB202]
 gi|304559430|gb|ADM42094.1| Seryl-tRNA synthetase [Edwardsiella tarda FL6-60]
          Length = 430

 Score = 59.0 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 63/188 (33%), Gaps = 10/188 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M     +   Y E   P +++      +G    + A++F  +  ++   D
Sbjct: 170 ARMHRALAQFMLDLHTEQHGYLETYVPYLVNHDTLYGTGQLPKFGADLFHTRPLEEEA-D 228

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
             T+AL P        +    +     LP+++      +R+E         GL+R+  F 
Sbjct: 229 SSTYALIPTAEVPVTNLVRGEILEESALPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFD 288

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E       ++      + +        V L T              +W  
Sbjct: 289 KVELVQIVRPEDSMAALEELTAHAEKVLQLLNLPYRKVLLCTGDMGFGSSKTYDLEVWVP 348

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 349 AQNTYREI 356


>gi|217316831|gb|ACK37821.1| putative glutamyl-prolyl tRNA synthetase [Euastacus eungella]
          Length = 134

 Score = 59.0 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 50/133 (37%), Gaps = 18/133 (13%)

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           GA +    E     A GR  Q  T   +  N    F   + +  +++      ++  +G 
Sbjct: 1   GADFTTTTE-AFISANGRGIQGATSHHLGQNFSKMFEIVFEDPETQQKQ--YCYQNSWGL 57

Query: 531 IERFIGIMIENFKGNLPLWLSP----IQAIVTTIT----------SSAVEYAQEIANLLK 576
             R IG+M+     +  L L P    +QAI+  +           SS ++   ++A  L 
Sbjct: 58  TTRTIGVMVMVHGDDKGLVLPPRVASVQAIIMPVGITAKSSEQDKSSLMDACNKLAADLN 117

Query: 577 SHHLSIETDFRNE 589
           +  +    D R+ 
Sbjct: 118 AAGVRARCDLRDN 130


>gi|332141537|ref|YP_004427275.1| seryl-tRNA synthetase [Alteromonas macleodii str. 'Deep ecotype']
 gi|238693277|sp|B4RZU0|SYS_ALTMD RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|327551559|gb|AEA98277.1| seryl-tRNA synthetase [Alteromonas macleodii str. 'Deep ecotype']
          Length = 430

 Score = 59.0 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 64/188 (34%), Gaps = 12/188 (6%)

Query: 273 WKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M      +  Y+E+  P +++      +G    +  ++F  K A    ++
Sbjct: 171 ARLNRALAQFMLDTHTQEHGYQEMYVPYLVNADSLYGTGQLPKFGEDLFHTKPA---TEE 227

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
            +  +L P        +    +   + LPV++      +R+E         GL+R   F 
Sbjct: 228 GQGLSLIPTAEVPLTNIARDEILDAKTLPVKMTAHTPCFRSEAGSYGRDTRGLIRQHQFD 287

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E  F+    +      I +        V L T              +W  
Sbjct: 288 KVELVQLVKPEDSFDALEALTGHAEVILQKLELPYRKVLLCTGDMGFGACKTYDLEVWLP 347

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 348 AQNTYREI 355


>gi|320352953|ref|YP_004194292.1| (p)ppGpp synthetase I SpoT/RelA [Desulfobulbus propionicus DSM
           2032]
 gi|320121455|gb|ADW17001.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfobulbus propionicus DSM
           2032]
          Length = 721

 Score = 58.6 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 2/72 (2%)

Query: 2   PSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSI-E 60
           P    LT P G ++  P  +T  D A SI  ++    V   +NG++  L   ++ G I E
Sbjct: 386 PDVFALT-PTGEVRELPRGSTPIDFAYSIHSAVGDTCVGAKVNGQIVQLKHELQSGDIVE 444

Query: 61  IITPEDPRSLAV 72
           I+T ++      
Sbjct: 445 ILTQKNQHPRRA 456


>gi|291524925|emb|CBK90512.1| alanyl-tRNA synthetase [Eubacterium rectale DSM 17629]
          Length = 886

 Score = 58.6 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 54/132 (40%), Gaps = 10/132 (7%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKM 126
           R+     HS  H++ +A++ +        G   + +   +DF      +++EL ++E  +
Sbjct: 566 RTNTCRNHSATHLLQKALREVLGTHVEQAGSYQDAERTRFDFSHFSAMTAEELKRVEDIV 625

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCRG 185
            E I          ++ ++A++         K          E V +   G++  + C G
Sbjct: 626 NEKINEAIEVRTDIMTVDEAKKTGAMALFGEKY--------GEKVRVVSMGDFSKEFCGG 677

Query: 186 PHVRSTGQVKKF 197
            HV++T  +K F
Sbjct: 678 THVKNTSDIKVF 689


>gi|254796923|ref|YP_003081760.1| seryl-tRNA synthetase [Neorickettsia risticii str. Illinois]
 gi|254590159|gb|ACT69521.1| seryl-tRNA synthetase [Neorickettsia risticii str. Illinois]
          Length = 415

 Score = 58.6 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 77/222 (34%), Gaps = 21/222 (9%)

Query: 242 EKRDHRKLAREMDL--FHIAEDGSGVIF--WHRKGWKIFQTLISYMRRKIKD-DYEEINT 296
           E + H +L   + +  F      SG  F  +  KG ++F+ L  +M     +  + E   
Sbjct: 132 EPKAHDELGVALGILDFLNVAKVSGARFSGFIGKGARLFRVLKDFMLDHNTEHGHREYFL 191

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P ++ +    ++G    +    F V              L P +    +   +       
Sbjct: 192 PYLVKEDAMYKAGQLPKFSQESFRVDGG---------MRLVPTSEVTLLNFVSDNFFGEA 242

Query: 357 ELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           ELP+R+  +   +R+E         G++R   F + +       E+   E  ++  +   
Sbjct: 243 ELPLRMTSYSECFRSEAGSSGKDTKGIIRQHQFGKVELLSITEPEKSDEELERMLCIAEG 302

Query: 414 IYKDFGFEKIMVKLSTR----PEKRVGSDALWDDAENIMKGV 451
           + +       +V L +       K+     +W  ++   + +
Sbjct: 303 LLQKLKLPYRVVNLCSGDIGFCSKKTYDIEVWIPSQCCYREI 344


>gi|319740181|gb|ADV60384.1| glu- + pro-tRNA synthetase [Quentalia chromana]
          Length = 134

 Score = 58.6 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 56/133 (42%), Gaps = 18/133 (13%)

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           G +Y    E  +  A GR  Q  T   +  N    F   Y ++ +++ +   +++  +G 
Sbjct: 1   GGYYTTTVEAYVP-ASGRAIQGATSHHLGQNFSKMFEIVYDDAETQEKN--YVYQNSWGI 57

Query: 531 IERFIGIMI----ENFKGNLPLWLSPIQAIVTTIT----------SSAVEYAQEIANLLK 576
             R IG+M+    ++    LP  ++ IQAIV                 ++  + + +LL 
Sbjct: 58  TTRTIGVMVLVHGDDKGLVLPPRIAEIQAIVVPCGVTASSSAEERKKLIDSCKALVDLLV 117

Query: 577 SHHLSIETDFRNE 589
           +  +  E D+R+ 
Sbjct: 118 AAGVRSEGDYRDN 130


>gi|320106187|ref|YP_004181777.1| seryl-tRNA synthetase [Terriglobus saanensis SP1PR4]
 gi|319924708|gb|ADV81783.1| seryl-tRNA synthetase [Terriglobus saanensis SP1PR4]
          Length = 440

 Score = 58.6 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/193 (12%), Positives = 63/193 (32%), Gaps = 14/193 (7%)

Query: 272 GWKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCAD---- 325
           G ++ + L ++M         Y E+  P +++      +G    +  ++F          
Sbjct: 171 GARLERALANFMLDLHTRLHGYTEVLPPFMVNSKSLYGTGQLPKFAEDLFHSDDKGSYVP 230

Query: 326 DTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMR 382
             ++D   + + P        +         +LP+    +   +R+E       + G++R
Sbjct: 231 GELQDNDHWLI-PTAEVPVTNLLRDETIDEVKLPISYCAWTPCFRSEAGSYGKDVRGMIR 289

Query: 383 VRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSD 438
              F + +   F T      E  K+     ++ +        + L T             
Sbjct: 290 QHQFQKVELVKFATPADSEFEHEKLTRHAETVLELLKLPYRRMLLCTGDMGFSSAKTYDL 349

Query: 439 ALWDDAENIMKGV 451
            +W   +N+ + +
Sbjct: 350 EVWLPGQNLYREI 362


>gi|298387439|ref|ZP_06996991.1| histidine--tRNA ligase [Bacteroides sp. 1_1_14]
 gi|298259646|gb|EFI02518.1| histidine--tRNA ligase [Bacteroides sp. 1_1_14]
          Length = 454

 Score = 58.6 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/204 (13%), Positives = 71/204 (34%), Gaps = 19/204 (9%)

Query: 442 DDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFN 501
           +++E I+ G L+T+   ++  ++  +  G   + G  FE    D        G      N
Sbjct: 268 EESEFIL-GTLETMGLKNEIELDLTLARGLNYYTGAIFEVKALDVQIGSITGGGR--YDN 324

Query: 502 LPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIM--IENFKGNLPLWLSPIQAIVTT 559
           L   F    V+              +    +R   ++  +E +       ++  + +   
Sbjct: 325 LTGVFGMAGVSGVG-----------ISFGADRIFDVLNQLELYPKEA---VNGTELMFVN 370

Query: 560 ITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSI 619
                  ++  +   +++  +  E       +  ++   + K +P + I G+ E +E   
Sbjct: 371 FGDKEASFSMSMLAKVRAAGIRAEIFPDAAKMKKQMSYANAKSVPFVAIVGENEMNEGKA 430

Query: 620 GIRRFGSTTTQKVSLLDAIPILTK 643
            ++   +     VS+ + I  L  
Sbjct: 431 MLKNMETGEQNLVSVEELIAALRN 454


>gi|2500961|sp|Q56273|SYA_THIFE RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|1263913|emb|CAA64818.1| alanyl-tRNA synthetase [Acidithiobacillus ferrooxidans]
          Length = 877

 Score = 58.6 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/137 (21%), Positives = 55/137 (40%), Gaps = 10/137 (7%)

Query: 63  TPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDELAQ 121
             E  R      HS  H++  A+++I        G  +  +   +DF   +P ++ +L +
Sbjct: 553 VDEVARRATAAHHSATHLLHAALRNILGSHVQQKGSLVNPERLRFDFSHPEPVTAAQLRE 612

Query: 122 IEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-F 180
           IE+ +   I  +     + L   +A+ L        K          + V + R G++  
Sbjct: 613 IERVVNAAIRNNVGAETRILPVAEAQALGAMALFGEKY--------GDEVRVVRMGDFSM 664

Query: 181 DLCRGPHVRSTGQVKKF 197
           +LC G HV + G +  F
Sbjct: 665 ELCGGTHVEALGDIGVF 681


>gi|298245208|ref|ZP_06969014.1| seryl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
 gi|297552689|gb|EFH86554.1| seryl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
          Length = 420

 Score = 58.6 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 37/193 (19%), Positives = 73/193 (37%), Gaps = 15/193 (7%)

Query: 272 GWKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
           G ++ + L+S+M      + +Y E+  P +  + +   +G    +    +A         
Sbjct: 163 GARLERALLSFMLDLHTCEAEYIEVIPPFLAKRSVMLGAGQLPKFEEQAYACTMD----- 217

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE---PSGSLHGLMRVRGF 386
                 L P      V +    +    ELP+R A + + +R E    S    GL+R+  F
Sbjct: 218 ---ELYLNPTAEVALVGMHTDSILMREELPLRYAAWTTAFRREAGSASRYQRGLLRLHQF 274

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDAEN 446
            + +   F T EQ ++   ++      + +       +V+L         S +   D E 
Sbjct: 275 NKVELFQFTTPEQSYSAHEQMLLHAEQVLRLLELPYRVVELCALNLPFAASRSF--DLEV 332

Query: 447 IMKGVLDTIKNSS 459
            +  + D I+ SS
Sbjct: 333 WLPSLQDYIEVSS 345


>gi|239816998|ref|YP_002945908.1| seryl-tRNA synthetase [Variovorax paradoxus S110]
 gi|259516224|sp|C5CWN5|SYS_VARPS RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|239803575|gb|ACS20642.1| seryl-tRNA synthetase [Variovorax paradoxus S110]
          Length = 443

 Score = 58.6 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/225 (14%), Positives = 76/225 (33%), Gaps = 15/225 (6%)

Query: 242 EKRDHRKLAREMDL-FHIAEDGSGVIFWHRKG--WKIFQTLISYMRRKIKD--DYEEINT 296
             +DH  L   + L F +    +G  F   KG   ++ + L  +M     +   Y E   
Sbjct: 145 AAKDHVDLGAPLGLDFEMGAKLAGSRFTVMKGPIARLHRALAQFMLDIQTEKHGYAECYV 204

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVK---CADDTIKDLRTFALKPMNCPGHVAVFNHGLK 353
           P +++      +G    +  ++FA K      +   D     L P +           + 
Sbjct: 205 PYIVNAATLSGTGQLPKFEGDLFAAKKGGQEGEPAPDHSALYLIPTSEVPLTNFVRDEVV 264

Query: 354 SYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNL 410
           +  +LP++L      +R+E   +     G++R   F + +       E+ ++   ++   
Sbjct: 265 AEAQLPIKLTAHTPCFRSEAGSAGRDTRGMIRQHQFDKVEMVQIVHPEKSYDALEQMTGH 324

Query: 411 IISIYKDFGFEKI----MVKLSTRPEKRVGSDALWDDAENIMKGV 451
             ++ +                     +     +W  A+N  + +
Sbjct: 325 AEAVLQALELPYRVVLLCTGDMGFGATKTYDLEVWLPAQNTYREI 369


>gi|154496106|ref|ZP_02034802.1| hypothetical protein BACCAP_00390 [Bacteroides capillosus ATCC
           29799]
 gi|150274661|gb|EDN01725.1| hypothetical protein BACCAP_00390 [Bacteroides capillosus ATCC
           29799]
          Length = 465

 Score = 58.6 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 53/339 (15%), Positives = 105/339 (30%), Gaps = 66/339 (19%)

Query: 345 VAVFNHGLKSYREL--PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFN 402
           V +  +    Y EL  P R  + G VYR E +       R R F Q D  V    +    
Sbjct: 83  VPLAKYVALHYNELSFPFRRFQIGKVYRGERAQR----GRFREFYQADIDVIGDGKLDII 138

Query: 403 ECLKIHNLIISIYKDFGFEKIMVKLSTRPE------------------------KRVGSD 438
              +I ++I   +   G  +  ++++ R                          +++G D
Sbjct: 139 NEAEIPSIIYRAFTALGLRRFKIRVNNRMVLNGLFALLGLEQQAGDVMRTIDKLEKIGPD 198

Query: 439 ALW-----------DDAENIMK--------GVLDTIKNSSQ------DRINTGVLLGEGA 473
            +            D A+ ++           L+  K  ++      + +NT V     A
Sbjct: 199 KVKAILVDDFAVSADTADTLLSLLSAADPMAALEPFKGKNELFDLGVEELNTVVKY-MAA 257

Query: 474 FYGPKFEYILK--DAIGRDWQCGTIQVDFNLPS---RFNAFYVNSHSEKCHPVMIHRAVF 528
           F  P   +++    A G D+  GT+     L               +   +         
Sbjct: 258 FGVPADHFMVDLTIARGLDYYTGTVYETVMLDHPEVGSICSGGRYDNLAEYYTDKQLPGV 317

Query: 529 GSI---ERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETD 585
           G      R   ++ E    N     +P   ++  +T   +  A   A  L++  +  +  
Sbjct: 318 GISIGLTRLFYVLQEQKMLNASN-AAPADVLILPMTED-LSAAISFATALRAQGVRAQLH 375

Query: 586 FRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRF 624
              +    K+   +   IP     G+ E    ++ ++  
Sbjct: 376 CEQKKFKQKLNYANKLSIPFAAFLGEDEVKAGTVTVKNL 414


>gi|94263583|ref|ZP_01287393.1| tRNA synthetase, class II (G, H, P and S):Seryl-tRNA synthetase,
           class IIa [delta proteobacterium MLMS-1]
 gi|93456003|gb|EAT06154.1| tRNA synthetase, class II (G, H, P and S):Seryl-tRNA synthetase,
           class IIa [delta proteobacterium MLMS-1]
          Length = 427

 Score = 58.6 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 67/188 (35%), Gaps = 17/188 (9%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + LIS+M     +   Y E+  P +++      +G    +  ++F ++ AD     
Sbjct: 173 ARLERALISFMLDLHTEKHGYTEVLPPFLVNSASMTATGQLPKFAEDLFRIEGAD----- 227

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
                L P        +      + +ELP+    +   +R+E         GL+R   F 
Sbjct: 228 ---LWLIPTAEVPVTNIHRDETLAEKELPIYYCAYTPCFRSEAGSYGRDTKGLIRQHQFD 284

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +   F T E    E  K+ +    + +       +V L +              +W  
Sbjct: 285 KVELVKFTTPETSDAELEKLLSDAEKVLQLLELPHRVVTLCSGDLGFSARKTYDIEVWMP 344

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 345 AQNCYREI 352


>gi|87300561|ref|ZP_01083403.1| histidyl-tRNA synthetase [Synechococcus sp. WH 5701]
 gi|87284432|gb|EAQ76384.1| histidyl-tRNA synthetase [Synechococcus sp. WH 5701]
          Length = 450

 Score = 58.6 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 18/106 (16%), Positives = 41/106 (38%), Gaps = 5/106 (4%)

Query: 540 ENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHS 599
           +  +G LP    P    V +   +A   A  ++  L+     +E D        +++   
Sbjct: 341 DAAEGALPTVPVPD-VYVVSRGEAAERQALVLSRQLRQAGQMVELDLTGSAFGKQLKRAD 399

Query: 600 IKKIPIIIICGDKEASERSI---GIRRF-GSTTTQKVSLLDAIPIL 641
               P  ++ G+ EA +  +    +RR   S   +++  ++ +  L
Sbjct: 400 RSGAPWAVVIGEGEAEQGVVLLKNLRRSADSPEEERLRPVELLRRL 445


>gi|313205057|ref|YP_004043714.1| histidyL-tRNA synthetase [Paludibacter propionicigenes WB4]
 gi|312444373|gb|ADQ80729.1| histidyl-tRNA synthetase [Paludibacter propionicigenes WB4]
          Length = 451

 Score = 58.6 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 67/198 (33%), Gaps = 18/198 (9%)

Query: 446 NIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSR 505
             + G+ + +K  +   ++  +  G   + G  FE    D        G      NL   
Sbjct: 270 ETIFGLCEAMKVQTTIELDLTLARGLNYYTGAIFEVKALDVEMGSITGGGR--YDNLTGV 327

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTIT--SS 563
           F    V+              +    +R   ++    + NL    S  Q  +  ++    
Sbjct: 328 FGMEGVSGVG-----------ISFGADRIYDVL---NQLNLYPETSQEQTRILFVSFGEK 373

Query: 564 AVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRR 623
            + Y     + L++  ++ E       +  ++     K+IP + I G+ E  E  + ++ 
Sbjct: 374 ELMYCLPWLSALRNKGVNAEIYPEPAKMKKQMSYADNKRIPFVAIVGETEMKENKVMLKN 433

Query: 624 FGSTTTQKVSLLDAIPIL 641
             +      SL + + ++
Sbjct: 434 MKTGEQSLASLEELVELV 451


>gi|217316805|gb|ACK37808.1| putative glutamyl-prolyl tRNA synthetase [Ombrastacoides pulcher]
          Length = 134

 Score = 58.6 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 50/133 (37%), Gaps = 18/133 (13%)

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           GA +    E     A GR  Q  T   +  N    F   + +  +++      ++  +G 
Sbjct: 1   GADFTTTTE-AFISASGRGIQGATSHHLGQNFSKMFEIVFEDPETQQKQ--YCYQNSWGL 57

Query: 531 IERFIGIMIENFKGNLPLWLSP----IQAIVTTIT----------SSAVEYAQEIANLLK 576
             R IG+MI     +  L L P    +QAI+  +           S+ V+   +++  L 
Sbjct: 58  TTRTIGVMIMVHGDDKGLVLPPRVASVQAIIMPVGITAKSSEQEKSNLVDACNKLSADLN 117

Query: 577 SHHLSIETDFRNE 589
           +  +    D R+ 
Sbjct: 118 AAGVRARCDLRDN 130


>gi|228471913|ref|ZP_04056683.1| alanine--tRNA ligase [Capnocytophaga gingivalis ATCC 33624]
 gi|228276765|gb|EEK15471.1| alanine--tRNA ligase [Capnocytophaga gingivalis ATCC 33624]
          Length = 877

 Score = 58.6 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 53/274 (19%), Positives = 102/274 (37%), Gaps = 43/274 (15%)

Query: 10  PDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIEII------- 62
            DG++     + T           +  +    A NG++  ++D  +E ++ I        
Sbjct: 490 KDGTLYQLVFNTTPF--YPEGGGQVGDRGTLQAANGELIYITDTKKENNLIIHIAEHLPE 547

Query: 63  TPEDP---------RSLAVIRHSCAHIMAEAVQSIWPEVQVAIG-PIIEDGFYYDFDKEQ 112
              DP         R+LA   HS  H++ +A++ +        G  +  +   +DF    
Sbjct: 548 NLNDPFKAEVHPMGRALAQSNHSATHLLHQALREVLGTHVEQKGSHVSPEALRFDFSHFA 607

Query: 113 PFSSDELAQIEKKMQEIIARDSPFL-KQYLSHEKARELFESKKEAYKVEILESIPAKENV 171
             + +EL ++E+ + + I    P    + +  ++A E         K          E V
Sbjct: 608 KLTPEELTEVERLVNKRIYEKIPLEEHRNIPIQQALEAGAMALFGEKY--------GEKV 659

Query: 172 TLYRQGEWFDLCRGPHVRSTGQVKKFF--------------KLMKVAGAYWRGDSNRPML 217
            + + GE  +LC G HV++TG +  F               + +  AGA         +L
Sbjct: 660 RMIQFGESRELCGGTHVKNTGDIWFFKIVSEGAVAAGVRRIEAITNAGALKHFLLQEKLL 719

Query: 218 SRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAR 251
             I G+  N Q  +       EE+ +  H++L +
Sbjct: 720 EEIKGSLKNPQDPIKSITNLQEENARL-HKELEQ 752


>gi|213963758|ref|ZP_03392008.1| alanyl-tRNA synthetase [Capnocytophaga sputigena Capno]
 gi|213953638|gb|EEB64970.1| alanyl-tRNA synthetase [Capnocytophaga sputigena Capno]
          Length = 877

 Score = 58.6 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/151 (20%), Positives = 65/151 (43%), Gaps = 15/151 (9%)

Query: 49  DLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYD 107
           +L+DP +   + ++  E   +     HS  H++ +A++ +        G  +  +   +D
Sbjct: 548 ELNDPFK-AEVHLVAREMAEA----NHSATHLLHQALREVLGTHVEQKGSRVAPEALRFD 602

Query: 108 FDKEQPFSSDELAQIEKKMQEIIARDSPF-LKQYLSHEKARELFESKKEAYKVEILESIP 166
           F      +SDEL ++E+ + + I    P    + +  ++A E         K        
Sbjct: 603 FSHFAKLTSDELKEVERLVNKRIFEKIPLQEHRNIPIQQAVESGAMALFGEKY------- 655

Query: 167 AKENVTLYRQGEWFDLCRGPHVRSTGQVKKF 197
             + V + + G+  +LC G HV++TG +  F
Sbjct: 656 -GDRVRMIQFGDSKELCGGTHVKNTGDIWFF 685


>gi|114707288|ref|ZP_01440185.1| alanyl-tRNA synthetase [Fulvimarina pelagi HTCC2506]
 gi|114537169|gb|EAU40296.1| alanyl-tRNA synthetase [Fulvimarina pelagi HTCC2506]
          Length = 912

 Score = 58.6 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/155 (16%), Positives = 62/155 (40%), Gaps = 10/155 (6%)

Query: 56  EGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPF 114
           + ++++      RS     HS  H++ E ++ +        G  +  +   +DF   +P 
Sbjct: 566 DDALDLKVEHRRRSKIRSNHSATHLLHEGLREVLGTHVAQKGSLVAPERLRFDFSHPKPM 625

Query: 115 SSDELAQIEKKMQEIIARDSPFLKQYLSHEKARE------LFESKKEAYKVEILESIPAK 168
              E+  +E+    I+ +++P   + ++ ++A E        E   +  +V  + +    
Sbjct: 626 DRAEIEAVERLANGIVRQNAPVETRLMAVDEAIESGAMALFGEKYGDEVRVVSMGTAQEG 685

Query: 169 ENVTLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKV 203
           +           +LC G HV +TG++     + + 
Sbjct: 686 KKAGKPY---STELCGGTHVSATGEIGVVHVVGES 717


>gi|41614900|ref|NP_963398.1| histidyl-tRNA synthetase [Nanoarchaeum equitans Kin4-M]
 gi|46396587|sp|P60922|SYH_NANEQ RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|40068624|gb|AAR38959.1| NEQ102 [Nanoarchaeum equitans Kin4-M]
          Length = 404

 Score = 58.6 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 70/420 (16%), Positives = 143/420 (34%), Gaps = 70/420 (16%)

Query: 268 WHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADD 326
           +  +   +++ ++S +    +   ++ I TP V      +     ++ +  ++  +    
Sbjct: 11  FTPELAILWKEIVSKIESVYQKYGFDPIITPIVEYWDTLKGKYGEEAEKKEIWRFRV--- 67

Query: 327 TIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
             +  + +ALK       V +  +  +   +LP +       +R +         R R F
Sbjct: 68  -PQSKKWYALKY---DQTVPLARYFARFRPKLPFKRYTIDRTFRYDEPQK----GRYREF 119

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGS-----DALW 441
            Q DA +  +     +   +I N++I  Y+  GF   +     R  + +       D   
Sbjct: 120 WQADADIVGSPYPEADA--EILNMMIEAYETLGFNVYLRVSDRRALESLIEKVGEKDKFI 177

Query: 442 DDAENIMK-------GVLDTIKN--SSQDRINTGVLLGEGAFYGPKFEYILKD------- 485
           + A  I K       GVL+ +K      ++I   +      FY PK  + + D       
Sbjct: 178 EIARIIDKWDKIGEEGVLEKLKQITDKAEKIIELLKENPEEFY-PKEFWEIIDLVEKKNK 236

Query: 486 -------AIGRDWQCGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGI- 537
                  A G D+  G +   +     FN              +  +    ++   IGI 
Sbjct: 237 IKIDIKLARGFDYYTGMVYEVW--IEGFNRALGGGGRYDNLIGIFSKEKIPAVGGSIGIN 294

Query: 538 -MIENFKGNLPLWL---SPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDF--RNET- 590
            +I+         L   +  Q  V  I     + A  IAN L+   L++  D   R+   
Sbjct: 295 PLIDVGLEKGIFNLNKKTYTQIAVIYI--EVFKEAWRIANKLRDLGLNVYIDLLRRDFKK 352

Query: 591 -----INYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLL--DAIPILTK 643
                I   IR         ++I G K+ +   +  +   +   +K+ +   + I  L +
Sbjct: 353 QMEYVIEKDIR--------YLVIVGKKDLANNLVTFQDRLTRERKKIPIENLEEIKSLVQ 404


>gi|222823544|ref|YP_002575118.1| seryl-tRNA synthetase [Campylobacter lari RM2100]
 gi|254783014|sp|B9KFN2|SYS_CAMLR RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|222538766|gb|ACM63867.1| seryl-tRNA synthetase [Campylobacter lari RM2100]
          Length = 411

 Score = 58.6 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 32/222 (14%), Positives = 82/222 (36%), Gaps = 20/222 (9%)

Query: 242 EKRDHRKLAREMDL----FHIAEDGSGVIFWHRKGWKIFQTLISYMRR-KIKDDYEEINT 296
           E ++H  L  +++       +    S       +G  + + L++YM        +E +N 
Sbjct: 132 EIKEHHDLGEKLNWLDFTRGVKISQSRFCVLKNEGALLSRALVNYMIDFNRSRGFELVNV 191

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P +++      +G    ++ +M+ V+  D          L   +      ++++ + +  
Sbjct: 192 PFLVNGATMYGTGQLPKFKDDMYKVENDD--------LYLISTSEIPVTNLYSNEILTQE 243

Query: 357 ELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           ELP+++  + + +R E   +     G++R   F + +    C  +Q      ++ N    
Sbjct: 244 ELPLKMTCYSACFRQEAGSAGKDTRGIIRQHQFEKVELVSICKPDQSELMFEEMLNCASD 303

Query: 414 IYKDFGFEKIMVKLSTRPEKRVG----SDALWDDAENIMKGV 451
           +    G     + L T              +W  ++N  + +
Sbjct: 304 LLSSLGLAHRHLMLCTGDLGFSAAKTVDLEVWLPSQNKYREI 345


>gi|260655870|ref|ZP_05861339.1| serine--tRNA ligase [Jonquetella anthropi E3_33 E1]
 gi|260629486|gb|EEX47680.1| serine--tRNA ligase [Jonquetella anthropi E3_33 E1]
          Length = 430

 Score = 58.6 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 71/190 (37%), Gaps = 14/190 (7%)

Query: 271 KGWKIFQTLISYMRRK--IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTI 328
            G ++ + + +YM     +K  Y E N P ++       +G    +  +++ +   DD  
Sbjct: 168 LGARLERAMANYMLDLHCLKQGYTEYNVPLMVSTETMTGTGQLPKFAEDLYKIGGDDDVP 227

Query: 329 KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRG 385
                  L P        + +    S  +LP+ +  +   +R E       + G+MR+  
Sbjct: 228 -----LWLIPTAEVPLTNLHSGETLSEDDLPMYMTAYTPCFRREAGSYGKDVRGIMRLHQ 282

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALW 441
           F + +    CT E  ++E  K+     S+ +  G    ++ L +              +W
Sbjct: 283 FDKVEMVKLCTPETSYDELEKLTADAESVLQGLGLPYRVIVLCSGDIGFGSAKTYDVEVW 342

Query: 442 DDAENIMKGV 451
             ++N  + +
Sbjct: 343 LPSQNCYREI 352


>gi|148653337|ref|YP_001280430.1| seryl-tRNA synthetase [Psychrobacter sp. PRwf-1]
 gi|172048529|sp|A5WFN9|SYS_PSYWF RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|148572421|gb|ABQ94480.1| seryl-tRNA synthetase [Psychrobacter sp. PRwf-1]
          Length = 428

 Score = 58.6 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 62/188 (32%), Gaps = 11/188 (5%)

Query: 273 WKIFQTLISYM--RRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + LI +M     +K  Y E   P +++    + +G    +       K  + T  +
Sbjct: 170 AQLHRALIQFMLNTHTVKYGYTECYVPYIVNSDSLEGTGQLPKF--EEDLFKLTNHTNNE 227

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFT 387
              F L P        +         ELP++       +R+E         GL+R   F 
Sbjct: 228 AMGFYLIPTAEVPMTNLVRGERLDASELPLKFTAHTPCFRSEAGSHGRDTRGLIRQHQFE 287

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEK----RVGSDALWDD 443
           + +     T  Q      ++      I +       +VKL T        R     +W  
Sbjct: 288 KVEMVNIATAAQSDELLEQMTGQAEYILQQLQLPYRVVKLCTGDMGFSALRTYDIEVWVP 347

Query: 444 AENIMKGV 451
           +++  + +
Sbjct: 348 SQDTYREI 355


>gi|312143969|ref|YP_003995415.1| histidyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
 gi|311904620|gb|ADQ15061.1| histidyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
          Length = 424

 Score = 58.6 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 62/414 (14%), Positives = 132/414 (31%), Gaps = 48/414 (11%)

Query: 269 HRKGWKIFQTLISYMRRKIKD-DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDT 327
                K +Q +     +   + +Y+EI TP      L+Q+     +           D  
Sbjct: 13  LPPEIKKWQYIEDLTHKLFTNYNYQEIRTPIFEYTELFQRGIGEVTDIVEKEMYTFED-- 70

Query: 328 IKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFT 387
            K  R+  L+P      +  F       +  P +    G ++R E   S     R R F 
Sbjct: 71  -KSGRSITLRPEGTASVIRSFLENKIYGQAQPTKYYYIGPMFRYERPQS----GRFRQFH 125

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIM-------VKLSTRPEKRVGSDAL 440
           Q       + +   +   +I +L I + ++ G E           K       +     L
Sbjct: 126 QLGVEAIASDDPALDA--EIISLGIRLMEELGLEDFELHLNSVGCKSCRPKYVKKLKSFL 183

Query: 441 WDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYG-PKFEYILKDAIGRDWQCGTIQVD 499
            ++ E++     + I+ +    ++      +    G PK    L       +      +D
Sbjct: 184 IENKEDLCDKCRERIERNPLRVLDCKNQSCQSVIKGAPKITEHLCPECDEHFSEVQSFLD 243

Query: 500 FNLPS--------RFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLP---- 547
                        R   +Y N+  E     +  +       R+ G+  E    ++P    
Sbjct: 244 ILNIEYNINPLLVRGLDYYTNTAFEIKDNALGAQNTVFGGGRYNGLAEEIGNRDIPGIGF 303

Query: 548 ---------------LWLSPIQ---AIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE 589
                          + ++        +T I   A   A  + ++L++     E D+ + 
Sbjct: 304 ALGIERLLLSLDAKGIEVAEEAGIDLYITVIGKKAKREAFRLLDILRNEDFKTEIDYLDR 363

Query: 590 TINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           ++  +++          II G+ E    S  IR   S   +++ L + + ++ +
Sbjct: 364 SVGSQMKSADRMNAEYTIIIGEDELENNSATIRNMKSGNEEEIKLSNLLEVMKQ 417


>gi|218262762|ref|ZP_03477120.1| hypothetical protein PRABACTJOHN_02799 [Parabacteroides johnsonii
           DSM 18315]
 gi|218223164|gb|EEC95814.1| hypothetical protein PRABACTJOHN_02799 [Parabacteroides johnsonii
           DSM 18315]
          Length = 424

 Score = 58.6 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 69/198 (34%), Gaps = 16/198 (8%)

Query: 245 DHRKLAREMDLFHIA----EDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQV 299
            H +LA++ DL          G+G   +  +G ++ + LI++ +    K  Y EI  P V
Sbjct: 143 PHWELAKKYDLIDFDLGVKITGAGFPVYKGQGAQLQRALINFFLDEARKSGYTEIMPPTV 202

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           ++            Y       K       ++    L P        ++   +   ++LP
Sbjct: 203 VNA--------ASGYGTGQLPDKEGQMYHCEVDDLYLIPTAEVPVTNIYRDVILDEKQLP 254

Query: 360 VRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ++   +   +R E       + GL R+  F++ +       E       ++ + +  + +
Sbjct: 255 IKNCAYTQCFRREAGSYGKDVRGLNRLHEFSKVELVRIDKPEHSKQSHQEMLDHVEGLLQ 314

Query: 417 DFGFEKIMVKLSTRPEKR 434
                  +++L       
Sbjct: 315 KLELPYRILRLCGGDMSF 332


>gi|157962050|ref|YP_001502084.1| seryl-tRNA synthetase [Shewanella pealeana ATCC 700345]
 gi|189083587|sp|A8H4R2|SYS_SHEPA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|157847050|gb|ABV87549.1| seryl-tRNA synthetase [Shewanella pealeana ATCC 700345]
          Length = 428

 Score = 58.6 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 61/188 (32%), Gaps = 12/188 (6%)

Query: 273 WKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M      +  Y E   P ++++     +G    +  ++F  K A    ++
Sbjct: 170 ARMHRALAQFMLDLHTTEHGYTEAYVPLLVNEDSLLGTGQLPKFGEDLFHTKPA---TEE 226

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
            +  +L P        +    +     LP++L      +R+E         GL+R   F 
Sbjct: 227 GQGLSLIPTAEVPLTNLVRDTIVEEDNLPIKLTAHTPCFRSEAGSYGRDTRGLIRQHQFD 286

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E        +      + +  G     + L T              +W  
Sbjct: 287 KVEMVQLVKPEDSMQALEDLTGHAEVVLQKLGLPYRTMVLCTGDMGFGSAKTYDIEVWLP 346

Query: 444 AENIMKGV 451
           A++  + +
Sbjct: 347 AQDTYREI 354


>gi|300722523|ref|YP_003711813.1| serine tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
 gi|297629030|emb|CBJ89615.1| serine tRNA synthetase; also charges selenocystein tRNA with serine
           [Xenorhabdus nematophila ATCC 19061]
          Length = 429

 Score = 58.6 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/188 (12%), Positives = 64/188 (34%), Gaps = 11/188 (5%)

Query: 273 WKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + +  +M     +   Y E   P +++      +G    +  ++F  +  ++    
Sbjct: 170 ARLHRAIAQFMLNLHTEQHGYLETYVPYLVNYDSLYGTGQLPKFGEDLFHTRPLEEESAS 229

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
              +AL P        +    +    ELP+++      +R+E         GL+R+  F 
Sbjct: 230 N--YALIPTAEVPVTNLVRDEILDESELPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFD 287

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE----KRVGSDALWDD 443
           + +       E+      ++      + +        + L T       ++     +W  
Sbjct: 288 KVELVQIVHPEKSMEALEELTGHAEKVLQLLNLPYRKMLLCTGDMGAGARKTYDLEVWLP 347

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 348 AQNTYREI 355


>gi|239994319|ref|ZP_04714843.1| seryl-tRNA synthetase [Alteromonas macleodii ATCC 27126]
          Length = 433

 Score = 58.6 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 65/188 (34%), Gaps = 12/188 (6%)

Query: 273 WKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + +  +M      +  Y+E+  P +++      +G    +  ++F  K A    ++
Sbjct: 171 ARLNRAIAQFMLDTHTQEHGYQEMYVPYLVNADSLYGTGQLPKFGEDLFHTKPA---TEE 227

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
            +  +L P        +    +   + LPV++      +R+E         GL+R   F 
Sbjct: 228 GQGLSLIPTAEVPLTNIARDEILDAKTLPVKMTAHTPCFRSEAGSYGRDTRGLIRQHQFD 287

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E+ F+    +      I +        V L T              +W  
Sbjct: 288 KVELVQLVKPEESFDALEALTGHAEVILQKLELPYRKVLLCTGDMGFGACKTYDLEVWLP 347

Query: 444 AENIMKGV 451
           A+N  + +
Sbjct: 348 AQNTYREI 355


>gi|307721641|ref|YP_003892781.1| seryl-tRNA synthetase [Sulfurimonas autotrophica DSM 16294]
 gi|306979734|gb|ADN09769.1| seryl-tRNA synthetase [Sulfurimonas autotrophica DSM 16294]
          Length = 418

 Score = 58.6 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/189 (14%), Positives = 69/189 (36%), Gaps = 16/189 (8%)

Query: 271 KGWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
            G ++ + LI++M     +  ++E++ P ++++   + +G    +  +++ ++       
Sbjct: 171 MGARLERALINFMLDFNRQRGFDEVSVPALVNRKALEGTGQLPKFEDDLYKIQD------ 224

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGF 386
             +   L P        ++   + S  ELP R+  + S +R E   +     G++R   F
Sbjct: 225 --QELFLIPTAEVPVTNLYQDEILSVDELPKRMTAYTSCFRKEAGAAGRDTRGMIRQHQF 282

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG----SDALWD 442
            + +     T  +       +      + K       +V L T              +W 
Sbjct: 283 HKVELVSISTPGESNIIFDDMVTCASDLLKALELPHRLVTLCTGDLGFSAAKTIDLEVWL 342

Query: 443 DAENIMKGV 451
             +N  + +
Sbjct: 343 PGQNTYREI 351


>gi|315149220|gb|EFT93236.1| histidyl-tRNA synthetase [Enterococcus faecalis TX0012]
          Length = 433

 Score = 58.6 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 53/386 (13%), Positives = 120/386 (31%), Gaps = 51/386 (13%)

Query: 291 YEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKP--MNCPGHVAVF 348
           Y+EI TP       ++          ++ + +  D   K  R   L+P          V 
Sbjct: 36  YQEIRTPIF---EHYEVISRSVGDTTDIVSKEMYDFYDKGDRHVTLRPEGTAPIVRAFVE 92

Query: 349 NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIH 408
           N         P +    G ++R E   +     R+R F Q     F ++    +   +I 
Sbjct: 93  NKLYGPEYTKPYKTYYMGPMFRYERPQA----GRLRQFHQIGVEAFGSENPALDV--EIM 146

Query: 409 NLIISIYKDFGFEKIM--------------VKLSTRPEKRVGSDALWDDAENIMKG---- 450
            + +  +K  G ++I                + +           L +D++  +      
Sbjct: 147 AMALDFFKQLGIQQIKLVINSLGDKETRATYRQALIDYLEPHMAELSEDSQRRLHENPLR 206

Query: 451 VLDT-------IKNSSQDRINTGVLLGEGAFYGPK---------FEYILKDAIGRDWQCG 494
           VLD+       I   +   ++      +  F             +E       G D+   
Sbjct: 207 VLDSKDKKDKVIVAEAPSILDYLNEPSKAHFEAVTDMLDLLEIPYEIDSNMVRGLDYYTH 266

Query: 495 TIQVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIG------IMIENFKGNLPL 548
           TI    +   +  A        + + ++       +     G      ++    +  +  
Sbjct: 267 TIFEIMSEAPKMGAQSTICAGGRYNGLVEELGGPDTPGFGFGMGIERVLLTMEAEEVVIP 326

Query: 549 WLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIII 608
            LS + A V  I S     A ++   +++   S + D+ N     + +     +  +++ 
Sbjct: 327 ALSELDAYVVGIGSETNVAALQLVQSIRNFGFSADRDYMNRKPKAQFKTADKLQAKLVLT 386

Query: 609 CGDKEASERSIGIRRFGSTTTQKVSL 634
            G+ E +E  + ++   +   +   L
Sbjct: 387 IGENELNEGIVNVKSMATREEKSFPL 412


>gi|314933784|ref|ZP_07841149.1| alanine--tRNA ligase [Staphylococcus caprae C87]
 gi|313653934|gb|EFS17691.1| alanine--tRNA ligase [Staphylococcus caprae C87]
          Length = 876

 Score = 58.6 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/144 (20%), Positives = 61/144 (42%), Gaps = 9/144 (6%)

Query: 62  ITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELA 120
           +  ED R++    HS  H++  A++ +        G ++E D   +DF    P + +EL 
Sbjct: 553 VNKEDRRAIQ-KNHSATHLLHAALKEVLGYHVNQAGSLVEADRLRFDFSHFGPMTQEELD 611

Query: 121 QIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWF 180
           Q+E+++ E I R      Q +  ++A+ +        K   +  +      +        
Sbjct: 612 QVERRVNEEIWRGIDVRIQEMGIDEAKSMGAMALFGEKYSDIVRVVNMAPFS-------I 664

Query: 181 DLCRGPHVRSTGQVKKFFKLMKVA 204
           +LC G HV +T ++  F  + +  
Sbjct: 665 ELCGGIHVSNTAEIGLFKIVSESG 688


>gi|289549035|ref|YP_003474023.1| seryl-tRNA synthetase [Thermocrinis albus DSM 14484]
 gi|289182652|gb|ADC89896.1| seryl-tRNA synthetase [Thermocrinis albus DSM 14484]
          Length = 424

 Score = 58.6 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 64/188 (34%), Gaps = 16/188 (8%)

Query: 272 GWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G K+ + LI++M        Y E+ TP ++   +   +G    +  +++          +
Sbjct: 171 GAKLERALINFMLDLHTSRGYTEVMTPHLVKPEILVGTGQLPKFEEDLYKC--------E 222

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFT 387
                L P        +F   +    +LP+ L  +   YR E       + G++R   F 
Sbjct: 223 RDQLYLIPTAEVTLTNLFREEILREEDLPIYLTAYTPCYRREAGAYGKDVRGIIRQHQFD 282

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       E  + E  ++      + +       +V+L T              +W  
Sbjct: 283 KVELVKIVKPEDSYKELERLLEDAEEVLRLLQLPYRVVELCTGDLGFSSAKTYDIEVWFP 342

Query: 444 AENIMKGV 451
           ++   + V
Sbjct: 343 SQGRYREV 350


>gi|154494911|ref|ZP_02033916.1| hypothetical protein PARMER_03955 [Parabacteroides merdae ATCC
           43184]
 gi|154085461|gb|EDN84506.1| hypothetical protein PARMER_03955 [Parabacteroides merdae ATCC
           43184]
          Length = 424

 Score = 58.6 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 69/198 (34%), Gaps = 16/198 (8%)

Query: 245 DHRKLAREMDLFHIA----EDGSGVIFWHRKGWKIFQTLISY-MRRKIKDDYEEINTPQV 299
            H +LA++ DL          G+G   +  +G ++ + LI++ +    K  Y EI  P V
Sbjct: 143 PHWELAKKYDLIDFDLGVKITGAGFPVYKGQGAQLQRALINFFLDEARKSGYTEIMPPTV 202

Query: 300 LDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELP 359
           ++            Y       K       ++    L P        ++   +   ++LP
Sbjct: 203 VNA--------ASGYGTGQLPDKEGQMYHCEVDDLYLIPTAEVPVTNIYRDVILDEKQLP 254

Query: 360 VRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           ++   +   +R E       + GL R+  F++ +       E       ++ + +  + +
Sbjct: 255 IKNCAYTQCFRREAGSYGKDVRGLNRLHEFSKVELVRIDKPEHSKQSHQEMLDHVEGLLQ 314

Query: 417 DFGFEKIMVKLSTRPEKR 434
                  +++L       
Sbjct: 315 KLELPYRILRLCGGDMSF 332


>gi|145299385|ref|YP_001142226.1| seryl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
           A449]
 gi|166200595|sp|A4SNK6|SYS_AERS4 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|142852157|gb|ABO90478.1| seryl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
           A449]
          Length = 431

 Score = 58.6 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/190 (12%), Positives = 66/190 (34%), Gaps = 11/190 (5%)

Query: 273 WKIFQTLISYMRRK--IKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M     ++  Y E   P +++      +G    +  ++F      +   +
Sbjct: 170 ARLHRALAQFMLDLHTLQHGYTECYVPYLVNPDSLYGTGQLPKFSQDLFNTGIEGEGEDE 229

Query: 331 L--RTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRG 385
              R F+L P +      +    +   +ELP+++      +R+E         GL+R+  
Sbjct: 230 GKMRKFSLIPTSEVPLTNMARDEIFDEQELPIKMTAHSPCFRSEAGSYGRDTRGLIRMHQ 289

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMV----KLSTRPEKRVGSDALW 441
           F + +       E+ +    ++      + +       ++            +     +W
Sbjct: 290 FDKVEMVQLVHPEKSWEALEEMAGHAEKVLQLLELPYRVMALATGDMGFCAAKTYDLEVW 349

Query: 442 DDAENIMKGV 451
             A+N  + +
Sbjct: 350 LPAQNTYREI 359


>gi|24374938|ref|NP_718981.1| alanyl-tRNA synthetase [Shewanella oneidensis MR-1]
 gi|38372525|sp|Q8EBS1|SYA_SHEON RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|24349653|gb|AAN56425.1|AE015779_2 alanyl-tRNA synthetase [Shewanella oneidensis MR-1]
          Length = 874

 Score = 58.6 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 36/199 (18%), Positives = 69/199 (34%), Gaps = 33/199 (16%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGSIE 60
           M   I+ T  D           G+  A S+S     + +   ++ K+             
Sbjct: 511 MAQGIEFTVNDTQKFGQASGHKGTLTAGSLSVG---QVLEAKVDKKL------------- 554

Query: 61  IITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSDEL 119
                  R    + HS  H++  A++ +        G +++     +DF   +     EL
Sbjct: 555 -------RHRTQLNHSVTHLLHAALRQVLGTHVTQKGSLVDPERLRFDFSHFEAVKPFEL 607

Query: 120 AQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW 179
            Q+E+ +   I R+       ++ ++A+E         K            V +   G++
Sbjct: 608 KQVEELVNTQIRRNHELKVAEMAIDEAKEKGAMALFGEKY--------DSQVRVVTMGDF 659

Query: 180 -FDLCRGPHVRSTGQVKKF 197
             +LC G HV  TG +  F
Sbjct: 660 SIELCGGTHVGRTGDIGLF 678


>gi|330984183|gb|EGH82286.1| seryl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str.
           M301315]
          Length = 425

 Score = 58.6 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/188 (13%), Positives = 60/188 (31%), Gaps = 14/188 (7%)

Query: 273 WKIFQTLISYMRRKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
            ++ + L  +M         Y+E+ TP ++     + +G    +  ++F V         
Sbjct: 169 ARLHRALAQFMLDYHVDHHGYQEVYTPYLVGAQALRGTGQLPKFEEDLFKV-----ARHG 223

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNE--PSGS-LHGLMRVRGFT 387
                L P        +    + +  +LP+++      +R+E   SG    GL+R   F 
Sbjct: 224 QADLYLIPTAEVTLTNLVADKILNEHDLPIKMTAHTPCFRSEAGASGRDTRGLIRQHQFD 283

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG----SDALWDD 443
           + +       +        +      I +       +V+L                +W  
Sbjct: 284 KVEMVQIAHPDNSMEALDSMTGHAEKILQLLELPYRVVQLCAGDIGFSAVKTFDIEVWVP 343

Query: 444 AENIMKGV 451
           ++   + +
Sbjct: 344 SQEKYREI 351


>gi|315142808|gb|ADT80979.1| glutamyl- and prolyl-tRNA synthetase [Myrmekiaphila torreya]
 gi|315142810|gb|ADT80980.1| glutamyl- and prolyl-tRNA synthetase [Myrmekiaphila torreya]
 gi|315142812|gb|ADT80981.1| glutamyl- and prolyl-tRNA synthetase [Myrmekiaphila torreya]
          Length = 148

 Score = 58.6 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 51/143 (35%), Gaps = 19/143 (13%)

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           GA +    E  +  + GR  Q  T   +  N    F   + +  + +     +++  +G 
Sbjct: 9   GADFTTTVEAYVP-SNGRAIQGATSHHLGQNFSKMFEIVFEHPDTVEKQ--YVYQNSWGL 65

Query: 531 IERFIGIMIENFKGNLPLWL----SPIQAIVTTITSSA----------VEYAQEIANLLK 576
             R IG+ +     N  L L    +P Q ++     +A           E  + +   L 
Sbjct: 66  SSRSIGVAVMVHGDNAGLVLPPRVAPHQVVIVPCGVTANLPESEKKLLAEKCEALEKELH 125

Query: 577 SHHLSIETDFR-NETINYKIREH 598
              + ++ D+R N +  +K    
Sbjct: 126 EASIRVKGDYRENYSPGWKFNHW 148


>gi|303235731|ref|ZP_07322338.1| serine--tRNA ligase [Prevotella disiens FB035-09AN]
 gi|302484178|gb|EFL47166.1| serine--tRNA ligase [Prevotella disiens FB035-09AN]
          Length = 429

 Score = 58.6 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/213 (13%), Positives = 67/213 (31%), Gaps = 20/213 (9%)

Query: 246 HRKLAREMDLFHIA----EDGSGVIFWHRKGWKIFQTLISYMRRKIK-DDYEEINTPQVL 300
           H  L ++ +L          G+G   +  K  +  + L ++   + +   Y E+  P ++
Sbjct: 144 HWDLCKQYNLVDFDLGVKITGAGFPIYIGKMARFQRALEAFFLEEARKSGYLEVQPPLLV 203

Query: 301 DQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPV 360
           +                    K             L P        +F   +   +ELP+
Sbjct: 204 N--------QASGLGTGQLPDKEGQMYHVQADDLYLIPTAEVPVTNIFRDEILDEKELPI 255

Query: 361 RLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKD 417
           +   + S +R E       + GL R+  F + +     T +  +    ++   + S+ + 
Sbjct: 256 KRCAYSSCFRREAGSYGKDVRGLNRLHQFDKVEIVRIDTPQHSYESLNEMLEHVESLLQK 315

Query: 418 FGFEKIMVKLSTRPEKRV----GSDALWDDAEN 446
                 +++L                +W  A+ 
Sbjct: 316 LELPYHILRLCGGDMSFTSAICYDFEVWSAAQK 348


>gi|221633684|ref|YP_002522910.1| GTP pyrophosphokinase [Thermomicrobium roseum DSM 5159]
 gi|221157017|gb|ACM06144.1| GTP pyrophosphokinase [Thermomicrobium roseum DSM 5159]
          Length = 720

 Score = 58.6 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 1/70 (1%)

Query: 1   MPSDIKLTFPDGSIKNFPVHATGSDVAESISRSLAKKAVAVAINGKVCDLSDPVREGS-I 59
           +P  I +  P G +   P  AT  D A  I   +  + V   +NG++  L+  ++ G  +
Sbjct: 389 LPEMIYVFTPKGDVVELPAGATPIDFAYRIHTEVGHQCVGAKVNGQIVPLNYKLQNGQVV 448

Query: 60  EIITPEDPRS 69
           +IIT +    
Sbjct: 449 QIITSKSRTG 458


>gi|218130251|ref|ZP_03459055.1| hypothetical protein BACEGG_01839 [Bacteroides eggerthii DSM 20697]
 gi|317477608|ref|ZP_07936826.1| histidyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA]
 gi|217987535|gb|EEC53863.1| hypothetical protein BACEGG_01839 [Bacteroides eggerthii DSM 20697]
 gi|316906213|gb|EFV27949.1| histidyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA]
          Length = 458

 Score = 58.6 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 10/90 (11%), Positives = 36/90 (40%)

Query: 553 IQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDK 612
            Q +          ++  +   +++  +  E    +  +  ++   + K IP + + G+ 
Sbjct: 369 TQLLFINFGEKEAAFSMNVLAGVRAAGIRAEIFPDSSKMKKQMSYANSKMIPFVALVGEN 428

Query: 613 EASERSIGIRRFGSTTTQKVSLLDAIPILT 642
           E +E  + ++   +   + V+  + +  L+
Sbjct: 429 EMNEGKVTLKNMETGEQKLVTPQELVSELS 458


>gi|163781886|ref|ZP_02176886.1| seryl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159883106|gb|EDP76610.1| seryl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 424

 Score = 58.6 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 66/188 (35%), Gaps = 16/188 (8%)

Query: 272 GWKIFQTLISYMRR-KIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKD 330
           G ++ + LI++M        YEE+  P ++   + + +G    +  +++          +
Sbjct: 171 GARLERALINFMLDLHRTKGYEEVLPPHLVRPEVLEGTGQLPKFEEDLYKC--------E 222

Query: 331 LRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFT 387
                L P        +F   +    ELP+ L      YR E       + G++R   F 
Sbjct: 223 RDELYLIPTAEVPLTNLFRGEILKEEELPIYLTAHTPCYRREAGSHGKDIRGIIRQHQFN 282

Query: 388 QDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDD 443
           + +       +  ++E  K+      + K  G    +V+L T              +W  
Sbjct: 283 KVELVKIVHPDTSYDELEKLAADAEEVLKLLGLPYRVVELCTGDLGFSAAKTYDLEVWFP 342

Query: 444 AENIMKGV 451
           ++   + +
Sbjct: 343 SQGKYREI 350


>gi|118581577|ref|YP_902827.1| alanyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
 gi|205830173|sp|A1ATU9|SYA_PELPD RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|118504287|gb|ABL00770.1| alanyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
          Length = 878

 Score = 58.6 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/133 (22%), Positives = 57/133 (42%), Gaps = 10/133 (7%)

Query: 67  PRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKK 125
            RS     H+  H++  A++ +  E     G ++  D   +DF      +++E+ ++E  
Sbjct: 560 ERSATARNHTATHLLQAALRRVLGEHVKQAGSLVSPDRLRFDFIHFTAMTTEEIRRVETL 619

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE-WFDLCR 184
           +   +  + P +   +    A E   +     K          +NV + R GE   +LC 
Sbjct: 620 VNGFVMDNQPVVITQMDMASAIEAGATALFDEKY--------GDNVRVVRAGEVSMELCG 671

Query: 185 GPHVRSTGQVKKF 197
           G HVR+TG++  F
Sbjct: 672 GTHVRATGEIGLF 684


>gi|217316833|gb|ACK37822.1| putative glutamyl-prolyl tRNA synthetase [Euastacus robertsi]
          Length = 134

 Score = 58.6 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 50/133 (37%), Gaps = 18/133 (13%)

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           GA +    E     A GR  Q  T   +  N    F   + +  +++      ++  +G 
Sbjct: 1   GADFTTTTE-AFISASGRGIQGATSHHLGQNFSKMFEIVFEDPETQQKQ--YCYQNSWGL 57

Query: 531 IERFIGIMIENFKGNLPLWLSP----IQAIVTTIT----------SSAVEYAQEIANLLK 576
             R IG+M+     +  L L P    +QAI+  +           S+ ++   ++A  L 
Sbjct: 58  TTRTIGVMVMVHGDDKGLVLPPRVASVQAIIMPVGITAKSSEQDKSNLMDACNKLAADLN 117

Query: 577 SHHLSIETDFRNE 589
           +  +    D R+ 
Sbjct: 118 AAGVRARCDLRDN 130


>gi|167462223|ref|ZP_02327312.1| alanyl-tRNA synthetase [Paenibacillus larvae subsp. larvae
           BRL-230010]
          Length = 572

 Score = 58.6 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 62/151 (41%), Gaps = 12/151 (7%)

Query: 55  REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQP 113
            E S++       R   V  H+  H++ +A+  +  E     G  + +    +DF     
Sbjct: 245 TEASVDP----SLRGDIVKNHTATHLLHKALNEVLGEHVNQAGSLVAQQRLRFDFSHFGS 300

Query: 114 FSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTL 173
            + +EL ++E+K+ E I ++ P + + +  ++A+ +        K         K    +
Sbjct: 301 ITEEELQEVERKVNEQIWQNIPVIIKLMPIDEAKAMGAMALFGEKY-------GKVVRVV 353

Query: 174 YRQGEWFDLCRGPHVRSTGQVKKFFKLMKVA 204
                  +LC G HV +T ++ +F  + +  
Sbjct: 354 RVGDYSLELCGGCHVANTAEIGQFKIVSESG 384


>gi|332796483|ref|YP_004457983.1| histidyl-tRNA synthetase [Acidianus hospitalis W1]
 gi|332694218|gb|AEE93685.1| histidyl-tRNA synthetase [Acidianus hospitalis W1]
          Length = 426

 Score = 58.6 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 17/89 (19%), Positives = 41/89 (46%)

Query: 555 AIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEA 614
             +  +  + ++YA ++  +L  + +    + +N +++  I       I I+II G+ E 
Sbjct: 336 IAIIPLNENVIDYALKVLFILHENDIPAILNTKNISLSKIIPNLLDMNINIVIIIGENEK 395

Query: 615 SERSIGIRRFGSTTTQKVSLLDAIPILTK 643
            E  + I+   +     +SL D +P + +
Sbjct: 396 RENKVSIKDLTTRQQSSISLNDLLPYIRQ 424



 Score = 46.3 bits (108), Expect = 0.018,   Method: Composition-based stats.
 Identities = 36/162 (22%), Positives = 56/162 (34%), Gaps = 15/162 (9%)

Query: 274 KIFQTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRT 333
           KI      + +   K  Y E  TP + +  L+                       K  R 
Sbjct: 20  KIRYIEEQFSKIVKKSGYMEAITPILEEFELFALK------GGEELRNTMYTFIDKGGRE 73

Query: 334 FALKPMNCPGHVAVF-NHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAH 392
            AL+P   P  V +F N      +  P+RL   G+VYR +         R R F Q  A 
Sbjct: 74  VALRPEFTPSIVRLFLNSMQHLPK--PIRLYYIGTVYRYDEP----QFGRYREFRQ--AG 125

Query: 393 VFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR 434
           +    E   N  L++ +L+   +       I +K++     R
Sbjct: 126 IEMLGESSINADLEVLSLLWEFFNKINLTNITIKINNIAIYR 167


>gi|225076272|ref|ZP_03719471.1| hypothetical protein NEIFLAOT_01312 [Neisseria flavescens
           NRL30031/H210]
 gi|224952396|gb|EEG33605.1| hypothetical protein NEIFLAOT_01312 [Neisseria flavescens
           NRL30031/H210]
          Length = 431

 Score = 58.6 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 39/222 (17%), Positives = 76/222 (34%), Gaps = 14/222 (6%)

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHR-KG--WKIFQTLISYMRRK--IKDDYEEINT 296
           E +DH  L   + L            +   KG   ++ + L  +M     +K  Y E  T
Sbjct: 137 EIKDHVDLGEPLGLDFEGGAKLSGARFTVMKGQIARLHRALAQFMLDTHTLKHGYTEHYT 196

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P ++D    Q +G    +  ++F V    D  K  +     P             + +  
Sbjct: 197 PYIVDDLTLQGTGQLPKFAEDLFHVTRGGDESKKTQYLI--PTAEVTLTNTVADSIVAGS 254

Query: 357 ELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           +LP++L      +R+E       + GL+R   F + +       E+ +    ++     +
Sbjct: 255 DLPLKLTAHSPCFRSEAGAYGKDVRGLIRQHQFDKVEMVQIVHPEKSYEALEEMVGHAEN 314

Query: 414 IYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
           I K       ++ L T              +W  A+N  + +
Sbjct: 315 ILKALELPYRVITLCTGDMGFGATKTYDLEVWVPAQNTYREI 356


>gi|322382967|ref|ZP_08056799.1| alanyl-tRNA synthetase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321153087|gb|EFX45545.1| alanyl-tRNA synthetase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 882

 Score = 58.6 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 62/151 (41%), Gaps = 12/151 (7%)

Query: 55  REGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQP 113
            E S++       R   V  H+  H++ +A+  +  E     G  + +    +DF     
Sbjct: 555 TEASVDP----SLRGDIVKNHTATHLLHKALNEVLGEHVNQAGSLVAQQRLRFDFSHFGS 610

Query: 114 FSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTL 173
            + +EL ++E+K+ E I ++ P + + +  ++A+ +        K         K    +
Sbjct: 611 ITEEELQEVERKVNEQIWQNIPVIIKLMPIDEAKAMGAMALFGEKY-------GKVVRVV 663

Query: 174 YRQGEWFDLCRGPHVRSTGQVKKFFKLMKVA 204
                  +LC G HV +T ++ +F  + +  
Sbjct: 664 RVGDYSLELCGGCHVANTAEIGQFKIVSESG 694


>gi|302415006|ref|XP_003005335.1| seryl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
 gi|261356404|gb|EEY18832.1| seryl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
          Length = 451

 Score = 58.6 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 54/167 (32%), Gaps = 4/167 (2%)

Query: 260 EDGSGVIFWHRKGWKIFQTLISYMRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMF 319
              +G+ ++    + +         ++    Y     P  LD+    ++     +   ++
Sbjct: 171 YCLTGMGYFLPTPFPMTPFQYEIQTKRPLAGYTPNQPPYFLDRDQMAKTAQLSQFDEELY 230

Query: 320 AVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLH- 378
            V     T      + +     P      +  L+   +LP++ A F + +R E       
Sbjct: 231 RVSEGKSTDGSADKYLIATSEQPLSCLHADEWLQ-PGQLPIKYAGFSTCFRKEAGNHGRD 289

Query: 379 --GLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKI 423
             G+ RV  F + +  V C  E  +    ++       YK  G    
Sbjct: 290 AWGVFRVHQFEKVEQFVLCKPEDSWKFFDEMIATSEEFYKSLGLPYQ 336


>gi|254293766|ref|YP_003059789.1| seryl-tRNA synthetase [Hirschia baltica ATCC 49814]
 gi|254042297|gb|ACT59092.1| seryl-tRNA synthetase [Hirschia baltica ATCC 49814]
          Length = 437

 Score = 58.6 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 68/190 (35%), Gaps = 18/190 (9%)

Query: 271 KGWKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTI 328
           K  K+ + L  +M     D   Y+E++ P ++       +G    +  ++F         
Sbjct: 178 KMAKLERALTQFMLDVQTDEHGYQEVSPPFLVRDDALVGTGQLPKFEEDLFKTTN----- 232

Query: 329 KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRG 385
                F   P        +    + +  +LP+R+      +R+E   +     G++R+  
Sbjct: 233 ----DFYTIPTAEVPVTNLVREQILAEDQLPIRMTAATPCFRSEAGSAGRDTKGMIRLHQ 288

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPE----KRVGSDALW 441
           FT+ +       E+   E  ++     +I +       +V L T       KR     +W
Sbjct: 289 FTKVEMVSITKPEESDAELERMTGCAEAILQKLELPYRVVNLCTGDIGFGAKRTYDIEVW 348

Query: 442 DDAENIMKGV 451
             +++  + +
Sbjct: 349 LPSQDTYREI 358


>gi|237723396|ref|ZP_04553877.1| histidyl-tRNA synthetase [Bacteroides sp. 2_2_4]
 gi|299149448|ref|ZP_07042505.1| histidine--tRNA ligase [Bacteroides sp. 3_1_23]
 gi|229447918|gb|EEO53709.1| histidyl-tRNA synthetase [Bacteroides sp. 2_2_4]
 gi|298512635|gb|EFI36527.1| histidine--tRNA ligase [Bacteroides sp. 3_1_23]
          Length = 454

 Score = 58.6 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 32/208 (15%), Positives = 71/208 (34%), Gaps = 27/208 (12%)

Query: 442 DDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFN 501
           +++E I+   L+T+   ++  ++  +  G   + G  FE    D        G      N
Sbjct: 268 EESEFIL-NTLETMGLKNEIELDLTLARGLNYYTGAIFEVKALDVQIGSITGGGR--YDN 324

Query: 502 LPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI----- 556
           L   F    V+              +    +R   ++ +       L L P +A+     
Sbjct: 325 LTGVFGMAGVSGVG-----------ISFGADRIFDVLNQ-------LELYPKEAVNGTEL 366

Query: 557 -VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEAS 615
                      ++  I + +++  +  E       +  ++   + K IP + I G+ E +
Sbjct: 367 LFINFGEKEAAFSMGILSKVRAAGIRAEIFPDAAKMKKQMSYANTKNIPFVAIVGENEMN 426

Query: 616 ERSIGIRRFGSTTTQKVSLLDAIPILTK 643
           E    ++   +     VS  + I  + K
Sbjct: 427 EGKAMLKNMETGEQNLVSAEELIATVKK 454


>gi|145608852|ref|XP_369806.2| hypothetical protein MGG_06321 [Magnaporthe oryzae 70-15]
 gi|145016282|gb|EDK00772.1| hypothetical protein MGG_06321 [Magnaporthe oryzae 70-15]
          Length = 665

 Score = 58.6 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 63/185 (34%), Gaps = 20/185 (10%)

Query: 478 KFEYILKDAIGRDWQCGTIQVDFNLPSR---FNAFYVNSHSEKCHPVMIHRAVFGSIERF 534
           K E  LKD          +        +      +   + + +     +    FG I R 
Sbjct: 454 KLEKELKDNGSITVDVPGVGDGKVQVEKDLVSITWTKRTENTREFIPNVIEPSFG-IGRI 512

Query: 535 IGIMIENF-------KGN-------LPLWLSPIQAIVTTIT--SSAVEYAQEIANLLKSH 578
           +  ++E+         G+           ++P + ++  ++     V + Q+I+  L+S 
Sbjct: 513 LYCLLEHNYWTRASDGGDEARGVLSFTPVVAPTKVLIVPLSRHDDFVPFVQKISQKLRSV 572

Query: 579 HLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAI 638
            +S   D  + TI  +   +     P+ I    +   + +I +R   +T   +      +
Sbjct: 573 GVSSRVDDSSATIGRRYSRNDELGTPLGITVDFQTVKDGTITLRDRDTTVQVRADQDKIV 632

Query: 639 PILTK 643
             + +
Sbjct: 633 EAIQE 637



 Score = 42.1 bits (97), Expect = 0.30,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 2/70 (2%)

Query: 335 ALKPMNCPGHVAVFNHGLK-SYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHV 393
            L+P    G    F   L+ + +++P   A  G  YRNE S    GL+RVR F   +   
Sbjct: 218 YLRPETAQGQFLNFAKLLEYNNQQMPFASASIGKSYRNEISPR-SGLLRVREFLMAEIEH 276

Query: 394 FCTKEQMFNE 403
           F   E     
Sbjct: 277 FVDPESGKKH 286


>gi|254883595|ref|ZP_05256305.1| histidyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
 gi|319642337|ref|ZP_07996995.1| histidyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
 gi|254836388|gb|EET16697.1| histidyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
 gi|317386060|gb|EFV66981.1| histidyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
          Length = 454

 Score = 58.6 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 11/85 (12%), Positives = 31/85 (36%)

Query: 558 TTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASER 617
                    Y   I   ++   +  E       +  ++   + K+IP + I G+ E +E 
Sbjct: 369 VNFGDKEAAYCLPILAKVREAGVRAEIYPDASKMKKQMGYANDKQIPFVAIVGENEMNEG 428

Query: 618 SIGIRRFGSTTTQKVSLLDAIPILT 642
            + ++   +     V+  + + ++ 
Sbjct: 429 KLTLKNMTTGEQSLVTPDELLAVVK 453


>gi|254292635|ref|YP_003058658.1| alanyl-tRNA synthetase [Hirschia baltica ATCC 49814]
 gi|254041166|gb|ACT57961.1| alanyl-tRNA synthetase [Hirschia baltica ATCC 49814]
          Length = 897

 Score = 58.6 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 32/147 (21%), Positives = 62/147 (42%), Gaps = 3/147 (2%)

Query: 54  VREGSIEIITPEDPRSLAVI-RHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKE 111
           ++ G   ++  +  R   +   HS  HI+  A+++   +     G  + ED   +DF   
Sbjct: 556 IKAGVKALLEVDSVRRSNIRSNHSATHILHAALRNNLGDHVTQKGSLVEEDKLRFDFAHS 615

Query: 112 QPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKV-EILESIPAKEN 170
              S  EL +IE ++  +I ++S    + ++ + A E         K  + +  +   E 
Sbjct: 616 GTLSQVELDKIEAEVNAVIRQNSEVSTKEMAPDAAIEAGAMALFGEKYGDSVRVLAMGEA 675

Query: 171 VTLYRQGEWFDLCRGPHVRSTGQVKKF 197
           +    +    +LC G HVR TG +  F
Sbjct: 676 LEGGDKAYSVELCGGIHVRRTGDIAVF 702


>gi|156937361|ref|YP_001435157.1| glycyl-tRNA synthetase [Ignicoccus hospitalis KIN4/I]
 gi|156566345|gb|ABU81750.1| glycyl-tRNA synthetase [Ignicoccus hospitalis KIN4/I]
          Length = 580

 Score = 58.6 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/94 (21%), Positives = 41/94 (43%), Gaps = 3/94 (3%)

Query: 546 LPLWLSPIQAIVTTITSSA--VEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKI 603
           LP  L+PI+A+V  +      VE A+E+  LL      +E D +  +I  +   +    +
Sbjct: 463 LPRRLAPIEAVVLPLLEEKPLVEKAKEVWKLLADAGFRVEYDEKG-SIGRRYARYDEVGV 521

Query: 604 PIIIICGDKEASERSIGIRRFGSTTTQKVSLLDA 637
           P  I    +   + ++ +R   +    +V + + 
Sbjct: 522 PAAITVDFQTLEDNTVTLRDRDTWKQVRVRVEEL 555



 Score = 42.5 bits (98), Expect = 0.24,   Method: Composition-based stats.
 Identities = 35/154 (22%), Positives = 59/154 (38%), Gaps = 10/154 (6%)

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRE-LPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQ 388
           +     ++P    G    F    +  RE LP  +A+ G V RNE S    GL+R+R FT 
Sbjct: 156 EGDKGFIRPETAQGAFVNFKRVYQYMRERLPFGIAQIGRVGRNEISPR-QGLLRLREFTI 214

Query: 389 DDAHVFCTK----EQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWDDA 444
            +   F       E   +   K+  L   + K+    K  V+++ R     G       A
Sbjct: 215 AEIEFFIDPLDPGEPPLDYDAKLRLLPWELAKE--GRKEPVEVTVREALEKGWIINKWMA 272

Query: 445 ENIM--KGVLDTIKNSSQDRINTGVLLGEGAFYG 476
             ++  K +L+ +    +++        E A Y 
Sbjct: 273 YWMLKAKELLNELGVPDENQYFEEKGPEERAHYS 306


>gi|304415632|ref|ZP_07396234.1| seryl-tRNA synthetase [Candidatus Regiella insecticola LSR1]
 gi|304282511|gb|EFL91072.1| seryl-tRNA synthetase [Candidatus Regiella insecticola LSR1]
          Length = 430

 Score = 58.6 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 37/249 (14%), Positives = 86/249 (34%), Gaps = 21/249 (8%)

Query: 220 IYGTAWNTQQELTQYLYFLEESEK-RDHRKLA-REMDL-FHIAEDGSGVIFWHRKGW--K 274
             G      + ++ +    ++    +DH  L  R  +L F      +G  F   KG   +
Sbjct: 112 PEGNCEQDNKVISHWGDPRKDDCNVQDHVTLGERRGELDFAAGVKLTGTRFVVMKGAIAR 171

Query: 275 IFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLR 332
           + + L  +M     +   Y+E+  P +++ +    +G    +  ++F  K   +      
Sbjct: 172 LHRALSQFMLDLHTEQHGYQEVYVPYLVNSNSLLGTGQLPKFGEDLFHTKPLAEESS-SS 230

Query: 333 TFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQD 389
            +AL P        +    +     LP+++      +R+E         GL+R+  F + 
Sbjct: 231 NYALIPTAEVPLTNLVRGEILEGASLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKV 290

Query: 390 DA-------HVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVGSDALWD 442
           +        H     E++     K+  L+   Y+        +  +     +     +W 
Sbjct: 291 ELVQITRPEHSMEALEELTKHAEKVLQLLKLPYRKVLLCTGDMGAA---ACKTYDLEVWL 347

Query: 443 DAENIMKGV 451
            A+   + +
Sbjct: 348 PAQKKYREI 356


>gi|241759885|ref|ZP_04757985.1| serine--tRNA ligase [Neisseria flavescens SK114]
 gi|241319893|gb|EER56289.1| serine--tRNA ligase [Neisseria flavescens SK114]
          Length = 431

 Score = 58.6 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 39/222 (17%), Positives = 76/222 (34%), Gaps = 14/222 (6%)

Query: 242 EKRDHRKLAREMDLFHIAEDGSGVIFWHR-KG--WKIFQTLISYMRRK--IKDDYEEINT 296
           E +DH  L   + L            +   KG   ++ + L  +M     +K  Y E  T
Sbjct: 137 EIKDHVDLGEPLGLDFEGGAKLSGARFTVMKGQIARLHRALAQFMLDTHTLKHGYTEHYT 196

Query: 297 PQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVFNHGLKSYR 356
           P ++D    Q +G    +  ++F V    D  K  +     P             + +  
Sbjct: 197 PYIVDDLTLQGTGQLPKFAEDLFHVTRGGDESKKTQYLI--PTAEVTLTNTVADSIVAGS 254

Query: 357 ELPVRLAEFGSVYRNEP---SGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIIS 413
           +LP++L      +R+E       + GL+R   F + +       E+ +    ++     +
Sbjct: 255 DLPLKLTAHSPCFRSEAGAYGKDVRGLIRQHQFDKVEMVQIVHPEKSYEALEEMVGHAEN 314

Query: 414 IYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
           I K       ++ L T              +W  A+N  + +
Sbjct: 315 ILKALELPYRVITLCTGDMGFGATKTYDLEVWVPAQNTYREI 356


>gi|160871945|ref|ZP_02062077.1| alanyl-tRNA synthetase [Rickettsiella grylli]
 gi|159120744|gb|EDP46082.1| alanyl-tRNA synthetase [Rickettsiella grylli]
          Length = 871

 Score = 58.6 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/140 (22%), Positives = 56/140 (40%), Gaps = 10/140 (7%)

Query: 67  PRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIEDG-FYYDFDKEQPFSSDELAQIEKK 125
            R    + HS  H++   ++ I     +  G ++E     +DF    P + ++L  IE +
Sbjct: 547 KRHATTLNHSATHLLHAVLREILGTQVMQKGSLVEPERLRFDFSYSSPLTCEQLKLIENR 606

Query: 126 MQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FDLCR 184
           +   I  + P + Q +S E A++         K           NV +   G +  +LC 
Sbjct: 607 VNWQIRANLPVVTQVMSMEDAKKAGALALFGEKY--------GNNVRVLTIGTFSKELCG 658

Query: 185 GPHVRSTGQVKKFFKLMKVA 204
           G HV  TG +  F    + +
Sbjct: 659 GTHVSQTGDIGLFKITEESS 678


>gi|91784206|ref|YP_559412.1| histidyl-tRNA synthetase [Burkholderia xenovorans LB400]
 gi|123168325|sp|Q13X29|SYH_BURXL RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|91688160|gb|ABE31360.1| histidyl-tRNA synthetase [Burkholderia xenovorans LB400]
          Length = 446

 Score = 58.6 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 61/414 (14%), Positives = 121/414 (29%), Gaps = 79/414 (19%)

Query: 289 DDYEEINTPQVLDQHLWQ--QSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVA 346
             Y+ I TP +    L++       D     M++   A +         ++P N    V 
Sbjct: 42  YGYQNIRTPIIEHTQLFKRGIGEVTDIVEKEMYSFTDALN----GENLTMRPEN-TAAVV 96

Query: 347 VFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQD--DAHVFCTKEQMFNEC 404
                     + P RL   G ++R+E         R R F Q   +A  F   +      
Sbjct: 97  RAAIEHNMLYDGPKRLWYIGPMFRHERPQR----GRYRQFHQVGVEALGFAGPDADA--- 149

Query: 405 LKIHNLIISIYKDFGFEKIMVK------LSTRPEKRVGSDALWDDAENIMKG-------- 450
            +I  +   ++ D G   I ++         R   RV   A  +   +++          
Sbjct: 150 -EIIMMCQRLWDDLGLMGIKLELNSLGLAHERAAHRVELIAYLEKHMDVLDEEAKRRLYT 208

Query: 451 -----------VLDTIKNSSQDRINTGVLLGEGAFYGP-------KFEYILKDAIGRDWQ 492
                       +  +  ++   I+         F G           + +   + R   
Sbjct: 209 NPLRVLDTKNPAMQEVAQNAPKLIDFLGEESRAHFEGLQRILKANNIPFTINQRLVRGLD 268

Query: 493 CGTIQVDFNLPSRFNAFYVNSHSEKCHPVMIH-------RAVFGS-IERFIGIMIENFKG 544
              + V   +  +  A    +   +  P++            +   IER + ++ E    
Sbjct: 269 YYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQLGGKPTAACGWAMGIERILELLKEEQ-- 326

Query: 545 NLPLWLSPIQ----AIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNE--TINYK--IR 596
                L P        V     +A E A  IA  L+   L +      +  T ++K  ++
Sbjct: 327 -----LVPEDEGCDVYVVHQGEAAREQAFIIAERLRDTGLDVILHCSADGQTASFKSQMK 381

Query: 597 EHSIKKIPIIIICGDKEASERSIGIRRF-------GSTTTQKVSLLDAIPILTK 643
                     ++ G+ E +  ++G++         G      V   D    L  
Sbjct: 382 RADASGAAFAVVLGEDEIANGTVGVKPLRDTNADGGKNEQHNVPAEDLTEFLIN 435


>gi|32470802|ref|NP_863795.1| histidyl-tRNA synthetase [Rhodopirellula baltica SH 1]
 gi|39932076|sp|Q7UZ20|SYH_RHOBA RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|32442947|emb|CAD71466.1| histidyl-tRNA synthetase [Rhodopirellula baltica SH 1]
          Length = 442

 Score = 58.6 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/209 (13%), Positives = 65/209 (31%), Gaps = 25/209 (11%)

Query: 442 DDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFN 501
           +    I +G L +  +  + +I+  +  G   + G  FE  L +  G    C        
Sbjct: 247 ERLTQIYRGALASGVSPDRLKIDVSIARGLDYYTGVIFETTLDELPGIGSVCSG------ 300

Query: 502 LPSRFNAFYVNSHSEKCHPVMIHRAVFGSI---ERFIGIMIENFKGNLPLWLSPIQAIVT 558
                        +        H    G+    +R +  +     G L     P    V 
Sbjct: 301 ---------GRYDNLAGLYTKQHLPGIGASLGLDRLLAAL--ESLGRLSGVSKPCAVFVP 349

Query: 559 TITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERS 618
                  +   ++A+ L+   + +E     + +  +++    +   + II G  E    +
Sbjct: 350 FFDKGHRDDYLKLASQLRDAGIGVEVYPEPKKLGQQLKYADSQGFAVAIIAGGNEWEAGA 409

Query: 619 IGIRRFGSTTTQKV-----SLLDAIPILT 642
           + ++   +  +Q V     S    I  + 
Sbjct: 410 VQVKTLATKESQDVAYSHESPDALIEAIQ 438


>gi|315444723|ref|YP_004077602.1| histidyl-tRNA synthetase [Mycobacterium sp. Spyr1]
 gi|315263026|gb|ADT99767.1| histidyl-tRNA synthetase [Mycobacterium sp. Spyr1]
          Length = 420

 Score = 58.6 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/205 (12%), Positives = 70/205 (34%), Gaps = 17/205 (8%)

Query: 437 SDALWDDAENIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTI 496
           SDA  +  + ++   LD +       IN  ++ G   +    FE+ + D +G        
Sbjct: 228 SDAAKEHFDTVL-AHLDALSVPYV--INPRMVRGLDYYTKTTFEF-VHDGLG-------A 276

Query: 497 QVDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAI 556
           Q       R++             +       G     + +  E   G      + +   
Sbjct: 277 QSGIGGGGRYDGLMAQLGGRDLSGIGF---GLGVDRTLLALRAE---GRTAGETARVDVY 330

Query: 557 VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASE 616
              + + A      +A  L++  + ++  + + ++   ++        I ++ GD++   
Sbjct: 331 AVPLGADAKVRLAVLATQLRAAGVRVDVAYGDRSLKGAMKGADRSGASIALVAGDRDLEA 390

Query: 617 RSIGIRRFGSTTTQKVSLLDAIPIL 641
            ++G++   +     V+  D +  +
Sbjct: 391 GTVGVKSMATGEQVDVASDDVVAEV 415


>gi|313683350|ref|YP_004061088.1| alanyl-tRNA synthetase [Sulfuricurvum kujiense DSM 16994]
 gi|313156210|gb|ADR34888.1| alanyl-tRNA synthetase [Sulfuricurvum kujiense DSM 16994]
          Length = 851

 Score = 58.6 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/142 (18%), Positives = 57/142 (40%), Gaps = 11/142 (7%)

Query: 66  DPRSLAVI-RHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIE 123
           DP    +   HS  H++  A+  +  E     G ++E +   +DF   +  S +E+A +E
Sbjct: 542 DPERNEIAKHHSATHLLHAALYEVLGEHISQAGSLVEHNRLRFDFSHPKAMSHEEIALVE 601

Query: 124 KKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGE-WFDL 182
           +++   +      + + +S + A++     +   K          + V +   G    + 
Sbjct: 602 ERVNYHVFHALEGMTREMSIDDAKKSGAKAQFGEKY--------GDTVRVVNFGTASIEF 653

Query: 183 CRGPHVRSTGQVKKFFKLMKVA 204
           C G HV +T  +  F  + +  
Sbjct: 654 CGGVHVDNTATIGTFVIVKESG 675


>gi|295133970|ref|YP_003584646.1| histidyl-tRNA synthetase [Zunongwangia profunda SM-A87]
 gi|294981985|gb|ADF52450.1| histidyl-tRNA synthetase [Zunongwangia profunda SM-A87]
          Length = 456

 Score = 58.6 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 43/345 (12%), Positives = 107/345 (31%), Gaps = 66/345 (19%)

Query: 357 ELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLKIHNLIISIYK 416
           + P +  +   V+R +         R R F Q DA V  +      + ++   L  S++ 
Sbjct: 119 DFPFKRYQIQPVWRADRPQK----GRFREFYQCDADVVGSD--SLWQEVEFVQLYDSVFS 172

Query: 417 DFGFEKIMVKLSTRPEKRVGSDALWDDAENI-MKGVLDTIKNSSQDRINTGVLLGEGA-- 473
                 + +K++ R      ++ + +  + I     LD +    +D +   +L    +  
Sbjct: 173 ALNLNGVTIKINNRKILSGFAEVIGEQDKLIDFTVALDKLDKIGEDGVVKEMLSKGISEE 232

Query: 474 -------------FYGPKFE--------------------YILKDAIGRDWQCGTIQVDF 500
                         +  K E                    +I    +    +   + +D 
Sbjct: 233 AIAKIKPIFDLKGDFAEKIEALKAILSTSEVGLKGIEELEFIQNAILEMPLKTANLDLDV 292

Query: 501 NLPSRFNAFYVNSHSEKCHPVMIHRAVFGSIERF-----------------------IGI 537
            L    N +Y  +  E   P  +     G   R+                       I +
Sbjct: 293 TLARGLN-YYTGAIFEVAAPDEVKMGSIGGGGRYDDLTGIFGLKNMSGVGISFGLDRIYL 351

Query: 538 MIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIRE 597
           ++E            ++ +          YA +  N +++  ++ E       +  ++  
Sbjct: 352 VLEELNLFPEAVADDVKVLFVNFGEKEALYAFKGVNAIRAEGVNAEVFPDAAKMKKQMNY 411

Query: 598 HSIKKIPIIIICGDKEASERSIGIRRFGSTTTQKVSLLDAIPILT 642
            + + IP +I+ GD+E       ++   +    +++L + +  + 
Sbjct: 412 ANKRNIPFVILAGDEEMKAGEYTLKNMKTGEQDRLTLKELVAKIA 456


>gi|262189799|ref|ZP_06048144.1| prolyl-tRNA synthetase [Vibrio cholerae CT 5369-93]
 gi|262034317|gb|EEY52712.1| prolyl-tRNA synthetase [Vibrio cholerae CT 5369-93]
          Length = 91

 Score = 58.6 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 13/82 (15%), Positives = 30/82 (36%)

Query: 561 TSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIG 620
           +    + A+++   L +  + +  D R E       +  +  +P  II GD+   E    
Sbjct: 6   SERVQQAAEKLYAELTAAGIEVLFDDRKERPGVMFSDMELIGVPHTIIIGDRSMDEGHFE 65

Query: 621 IRRFGSTTTQKVSLLDAIPILT 642
            +       + V++   I  + 
Sbjct: 66  YKNRRQGEKEAVAMESIIDFIQ 87


>gi|148284335|ref|YP_001248425.1| alanyl-tRNA synthetase [Orientia tsutsugamushi str. Boryong]
 gi|205830167|sp|A5CD03|SYA_ORITB RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|146739774|emb|CAM79640.1| alanyl-tRNA synthetase [Orientia tsutsugamushi str. Boryong]
          Length = 891

 Score = 58.6 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 37/167 (22%), Positives = 62/167 (37%), Gaps = 20/167 (11%)

Query: 37  KAVAVAIN-GKVCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVA 95
           K V+  IN   V  ++             +  R+   I HS  HI+  A++ I     + 
Sbjct: 548 KIVSGKININAVVHMAI-----------DKQYRTQLQIHHSATHILHAALREILGNHIIQ 596

Query: 96  IGPIIE-DGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKK 154
            G ++  D   +D       S + L +IE ++ EII  ++      +  ++A        
Sbjct: 597 KGSLVAYDYLRFDVSHPTSISREILTKIENRVNEIILNNTAVKLMIMPFDQAIAHGAVAL 656

Query: 155 EAYKVE---ILESIPAKENVTLYRQGEWFDLCRGPHVRSTGQVKKFF 198
              K        SI    +   Y     F+LC G HV+ TG +  F 
Sbjct: 657 FEEKYGDEVRAISIGETSDARYY----SFELCGGTHVKYTGDIGAFR 699


>gi|319399907|gb|EFV88153.1| seryl-tRNA synthetase [Staphylococcus epidermidis FRI909]
          Length = 428

 Score = 58.6 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 51/356 (14%), Positives = 114/356 (32%), Gaps = 32/356 (8%)

Query: 111 EQPFSSDELAQIEKKMQEIIARDSPFLKQYLSH-EKARELFESKKEAYKVEILESIPAKE 169
           E+  S  EL   + K+ + +       ++ +S  E+ +       E    +      A +
Sbjct: 12  EKVKSKIELRGDDPKVVDQVLELDEQRRELISKTEEMKAKRNKVSEEIAQKKRNKEDADD 71

Query: 170 NVTLYRQ-GEWFDLCRGPHVRSTGQVK----KFFKLMKVAGAYWRGDSNRPMLSRIYGTA 224
            +   R  G+              +++    +   L+         D     + + +GT 
Sbjct: 72  VIAEMRHLGDEIKDIDNQLNEVDNKIRDILIRIPNLINEDVPQGASDEENVEVKK-WGTP 130

Query: 225 WNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWHRKGWKIFQTLISYMR 284
            + + E   +   +EE +  D  + A+      +             G  + + L++YM 
Sbjct: 131 RDFEFEPKAHWDLVEELKMADFERAAKVSGARFVYLTK--------DGALLERALMNYML 182

Query: 285 RKI--KDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCP 342
            K   +  Y E+ TPQ+++      +G    +  ++F V        +       P    
Sbjct: 183 TKHTTQHGYTEMMTPQLVNADTMFGTGQLPKFEEDLFKV--------EKEGLYTIPTAEV 234

Query: 343 GHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGS---LHGLMRVRGFTQDDAHVFCTKEQ 399
                +   +     LP       + +R+E   +     GL+R+  F + +       E 
Sbjct: 235 PLTNFYRDEIIQPGVLPELFTAQTACFRSEAGSAGRDTRGLIRLHQFDKVEMVRIVQPED 294

Query: 400 MFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKR----VGSDALWDDAENIMKGV 451
            +N   ++     +I ++       V L T              +W  + N  K +
Sbjct: 295 SWNALEEMTQNAEAILEELDLPYRRVILCTGDIGFSASKTYDLEVWLPSYNDYKEI 350


>gi|239827827|ref|YP_002950451.1| alanyl-tRNA synthetase [Geobacillus sp. WCH70]
 gi|239808120|gb|ACS25185.1| alanyl-tRNA synthetase [Geobacillus sp. WCH70]
          Length = 877

 Score = 58.6 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 56/143 (39%), Gaps = 10/143 (6%)

Query: 64  PEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP-IIEDGFYYDFDKEQPFSSDELAQI 122
            E  R+  +  H+  H++ +A++ +        G  +  D   +DF        +EL +I
Sbjct: 555 DEAKRASIIKNHTATHLLHQALKDVLGPHVNQAGSLVAPDRLRFDFSHFGQVKPEELERI 614

Query: 123 EKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEW-FD 181
           E  + E I R  P    Y    +A+ +        K          + V + + G++  +
Sbjct: 615 EAIVNEKIWRSIPVEIFYKPLAEAKAMGAMALFGEKY--------GDIVRVVQVGDYSLE 666

Query: 182 LCRGPHVRSTGQVKKFFKLMKVA 204
           LC G HV +T  +  F  + +  
Sbjct: 667 LCGGCHVPNTSAIGLFKIVSESG 689


>gi|148262370|ref|YP_001229076.1| seryl-tRNA synthetase [Geobacter uraniireducens Rf4]
 gi|189083570|sp|A5GD47|SYS_GEOUR RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|146395870|gb|ABQ24503.1| seryl-tRNA synthetase [Geobacter uraniireducens Rf4]
          Length = 422

 Score = 58.6 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 68/189 (35%), Gaps = 17/189 (8%)

Query: 272 GWKIFQTLISYMRRKIKD--DYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIK 329
           G ++ + LI++M     +   Y E+  P ++++     +G    +  ++F ++  D    
Sbjct: 168 GARLERALINFMLDLHTERHKYLEMLPPFMVNRESMTGTGQLPKFEEDLFHMEGVD---- 223

Query: 330 DLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRGF 386
               + L P        +    +    +LP+    +   +R E         GL+R   F
Sbjct: 224 ----YFLIPTAEVPVTNIHRGEILKAADLPLCYTAYTPCFRKEAGSYGKDTRGLIRQHQF 279

Query: 387 TQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLST----RPEKRVGSDALWD 442
            + +   F      +NE  K+ +    + +  G    +V L T        R     +W 
Sbjct: 280 NKVELVKFVHPAHSYNELDKLLDNAEEVLRLLGLPYRVVDLCTADIGFSAARTYDIEVWL 339

Query: 443 DAENIMKGV 451
             ++  + +
Sbjct: 340 PGQDCYREI 348


>gi|15920522|ref|NP_376191.1| histidyl-tRNA synthetase [Sulfolobus tokodaii str. 7]
 gi|32130136|sp|Q975U9|SYH_SULTO RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|15621305|dbj|BAB65300.1| 426aa long hypothetical histidyl-tRNA synthetase [Sulfolobus
           tokodaii str. 7]
          Length = 426

 Score = 58.6 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 15/87 (17%), Positives = 41/87 (47%)

Query: 557 VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASE 616
           V  ++  A+ YA  I + L+S++     + ++ +I+  I  ++ +    +I  G KE  +
Sbjct: 338 VIVLSDEAILYAIRIVDKLRSNNYIATINLKSISISKLIPSYAEEGYSFLIFIGKKEYED 397

Query: 617 RSIGIRRFGSTTTQKVSLLDAIPILTK 643
           ++I ++   +     +   + +  L +
Sbjct: 398 KTITLKNLSTKEQVTIKEENLLDYLKQ 424



 Score = 44.0 bits (102), Expect = 0.074,   Method: Composition-based stats.
 Identities = 34/136 (25%), Positives = 49/136 (36%), Gaps = 17/136 (12%)

Query: 289 DDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTIKDLRTFALKPMNCPGHVAVF 348
             Y+E+ TP V D  L+                       K  R  AL+P   P  V  +
Sbjct: 35  AGYQEVETPIVEDFQLFALK------GGEELRNTMYVFKDKAGREVALRPEFTPSIVRFY 88

Query: 349 NHGLKSYREL--PVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFNECLK 406
              L S + L  P+RL   G+VYR +         R R F Q  A +           L+
Sbjct: 89  ---LNSLQHLPKPIRLYYLGTVYRYDEP----QFGRYREFRQ--AGIELLGSSNIYSDLE 139

Query: 407 IHNLIISIYKDFGFEK 422
           I  ++I IY++     
Sbjct: 140 ILQILIEIYRELNLIN 155


>gi|326500272|dbj|BAK06225.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 888

 Score = 58.6 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 74/203 (36%), Gaps = 13/203 (6%)

Query: 446 NIMKGVLDTIKNSSQDRINTGVLLGEGAFYGPKFEYILKDAIGRDWQCGTIQVDFNLPSR 505
            I+   L+      +   +  +  G   + G  +E + K       Q G+I        R
Sbjct: 699 EILFKALEKANALDRISFDLSLARGLDYYTGVIYEAVFKGVT----QVGSIAAGG----R 750

Query: 506 FNAFYVNSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAV 565
           ++       +++   V +   +    ER   IM +  K    +  +    ++ +I    +
Sbjct: 751 YDKLVGMFSNKQVPAVGVSLGI----ERVFAIMEQQEKEKNQVIRATETEVLVSILGKDL 806

Query: 566 EYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASERSIGIRRFG 625
             A E+ N L S  +  E       +   I+  +   IP +++ G+ E  +  + ++   
Sbjct: 807 ILAAELVNELWSAGIKAEFKLTT-RVQNHIKYATQTGIPWMVLVGESELRDGKVKLKDIT 865

Query: 626 STTTQKVSLLDAIPILTKESLPP 648
           +   ++V   D + +L +    P
Sbjct: 866 ANQEEEVPRKDFVEVLKQRLSNP 888


>gi|229062084|ref|ZP_04199409.1| Alanyl-tRNA synthetase [Bacillus cereus AH603]
 gi|229169132|ref|ZP_04296847.1| Alanyl-tRNA synthetase [Bacillus cereus AH621]
 gi|228614360|gb|EEK71470.1| Alanyl-tRNA synthetase [Bacillus cereus AH621]
 gi|228717236|gb|EEL68911.1| Alanyl-tRNA synthetase [Bacillus cereus AH603]
          Length = 880

 Score = 58.6 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/161 (21%), Positives = 66/161 (40%), Gaps = 15/161 (9%)

Query: 44  NGK-----VCDLSDPVREGSIEIITPEDPRSLAVIRHSCAHIMAEAVQSIWPEVQVAIGP 98
           NG+     V +     +E +++ +     RS  V  H+  H++ +A++ I        G 
Sbjct: 531 NGQNLHKVVVEEGTLTKEAAVKALIDTKNRSSVVKNHTATHLLHQALKDILGTHVNQAGS 590

Query: 99  -IIEDGFYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAY 157
            +  +   +DF       +DEL +IE+ + E I           + E+A+E+        
Sbjct: 591 LVTSERLRFDFSHFGQVQADELEKIERIVNEKIWESIDVAISQKAIEEAKEMGAMALFGE 650

Query: 158 KVEILESIPAKENVTLYRQGEW-FDLCRGPHVRSTGQVKKF 197
           K          + V + + G++  +LC G HV +T  +  F
Sbjct: 651 KY--------GDVVRVVQVGDYSLELCGGCHVDNTASIGIF 683


>gi|242280583|ref|YP_002992712.1| alanyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
 gi|242123477|gb|ACS81173.1| alanyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
          Length = 880

 Score = 58.6 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 64/153 (41%), Gaps = 14/153 (9%)

Query: 55  REGSIEIITPEDPRSLAV--IRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKE 111
           +E  +E+     P +       H+  H++  A++ +  +     G ++  D   +DF   
Sbjct: 551 QEAKLEV----SPETRVATERNHTVTHLLHAALKKVLGDHVKQSGSLVGPDRLRFDFTHI 606

Query: 112 QPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENV 171
              + +E+ ++E ++   I  D+P + Q +S+++A     +     K   +  +      
Sbjct: 607 AAMTPEEIGEVENEVNRAILGDTPVVVQEMSNDEAAAKGATALFGEKYGDVVRVVEIP-- 664

Query: 172 TLYRQGEWFDLCRGPHVRSTGQVKKFFKLMKVA 204
                GE  +LC G H+++TG+   F    +  
Sbjct: 665 -----GESMELCGGTHLKATGEAGTFVIQSESG 692


>gi|51244680|ref|YP_064564.1| alanyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
 gi|59798523|sp|Q6AQ16|SYA_DESPS RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|50875717|emb|CAG35557.1| probable alanyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
          Length = 882

 Score = 58.6 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 35/159 (22%), Positives = 67/159 (42%), Gaps = 18/159 (11%)

Query: 47  VCDLSDPVREGSIEI-----ITPEDPRSLAVI-RHSCAHIMAEAVQSIWPEVQVAIGPII 100
           + DL   V EG + +     +  +D    A    HS  H++  A+ S+  +     G ++
Sbjct: 539 LHDL--LVEEGELSLGLEVTLQVDDEERKATASNHSATHLLQAALISVLGDHVKQSGSLV 596

Query: 101 EDG-FYYDFDKEQPFSSDELAQIEKKMQEIIARDSPFLKQYLSHEKARELFESKKEAYKV 159
                 +DF      ++ E+AQ+E  + E I  ++      LS ++A     +     K 
Sbjct: 597 GPERLRFDFTNFSQLTAAEIAQVETLVNEQIRNNAVIATDVLSKQEAIAGGATALFGEKY 656

Query: 160 EILESIPAKENVTLYRQGEWF-DLCRGPHVRSTGQVKKF 197
                    ++V +   G++  +LC G HV +TG++  F
Sbjct: 657 --------DDDVRVVSMGDYSRELCGGTHVGATGEIGLF 687


>gi|123965286|ref|YP_001010367.1| alanyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515]
 gi|205830181|sp|A2BTZ9|SYA_PROM5 RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|123199652|gb|ABM71260.1| Alanyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515]
          Length = 886

 Score = 58.6 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/138 (18%), Positives = 60/138 (43%), Gaps = 8/138 (5%)

Query: 68  RSLAVIRHSCAHIMAEAVQSIWPEVQVAIGPIIE-DGFYYDFDKEQPFSSDELAQIEKKM 126
           R+ A   H+  H++  A++ I  +     G ++  +   +DF+  QP S ++++Q+E  +
Sbjct: 557 RAKAESNHTATHLLQSALKLIIDKSVSQRGSLVGFNKLRFDFNSPQPLSKEQISQVESLV 616

Query: 127 QEIIARDSPFLKQYLSHEKARELFESKKEAYKVEILESIPAKENVTLYRQGEWFDLCRGP 186
              I+ + P   + +  + A +         K   +  +     V++   G       G 
Sbjct: 617 NSWISENHPIEVKNMDKDDALKAGALAMFGEKYGDIVRVVDVPGVSMELCG-------GT 669

Query: 187 HVRSTGQVKKFFKLMKVA 204
           HV++T +V  F  + ++ 
Sbjct: 670 HVQTTSEVGSFKIISEIG 687


>gi|76803150|ref|YP_331245.1| histidyl-tRNA synthetase [Natronomonas pharaonis DSM 2160]
 gi|121696645|sp|Q3IMP5|SYH_NATPD RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|76559015|emb|CAI50613.1| histidine--tRNA ligase [Natronomonas pharaonis DSM 2160]
          Length = 432

 Score = 58.6 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 55/428 (12%), Positives = 125/428 (29%), Gaps = 77/428 (17%)

Query: 268 WHRKGWKIFQTLISYMR-RKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADD 326
           ++       + +   +  R  +  + E+ TP +    L+                +    
Sbjct: 11  FYPGEMSARREVTDTIETRARRYGFREVGTPALERTQLYVDKS------GEEIVEELYAF 64

Query: 327 TIKDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGF 386
             K  R  +L P   P    +     ++  + PV+       +R E         R R F
Sbjct: 65  EDKGGREVSLTPELTPTVARMVVAKQQALAK-PVKWFSTRPFWRYEQVQQ----GRFREF 119

Query: 387 TQDDAHVF--CTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRVG-------- 436
            Q +  +F     E       ++         D G +    +        +G        
Sbjct: 120 YQTNIDIFGSERPEADA----EVLATAADALTDLGLDGADFEFRVSHRDILGGLLAAMDS 175

Query: 437 -----------------SDALW--------------DDAENIMK--GVLDTIKNSSQDRI 463
                             D  +              D  +++++   + + ++ +  DR+
Sbjct: 176 DVDTTDAIRAVDKREKIDDEEYRSLLVGAGLTHEEADTFDSLLRTDDLSELVEFAGTDRV 235

Query: 464 NTGVL-----LGEGAFYGPK--FEYILKDAIGRDWQCGTIQ-----VDFNLPSRFNAFYV 511
              V      L   A +G +      L+ A G D+  G +            S F     
Sbjct: 236 EAAVENLQAVLDAAADFGVREFCSVSLETARGLDYYTGVVFECFDTSGEVSRSVFGGGRY 295

Query: 512 NSHSEKCHPVMIHRAVFGSIERFIGIMIENFKGNLPLWLSPIQAIVTTITSSAVEYAQEI 571
           +   E            G     + ++ +   G  P         V T+  +  + A ++
Sbjct: 296 DDLIESFGGQPTPAVGVGIGHETLSLLCQ-RAGVWPAEELSTDYYVLTVGDT-RDVALDV 353

Query: 572 ANLLKSHHLSIETDFRNETINYKIREHSIKKIPI--IIICGDKEASERSIGIRRFGSTTT 629
           A  L++    +ETD  +     ++       I    +++ G+++  + ++ ++   S   
Sbjct: 354 ARELRALGHVVETDLSDRGFGDQLSYA--DGINAETVVVVGEQDLEDDAVTLKDMASGDQ 411

Query: 630 QKVSLLDA 637
            +V L   
Sbjct: 412 TQVPLAAF 419


>gi|315142780|gb|ADT80965.1| glutamyl- and prolyl-tRNA synthetase [Aptostichus atomarius]
          Length = 148

 Score = 58.6 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/143 (16%), Positives = 51/143 (35%), Gaps = 19/143 (13%)

Query: 472 GAFYGPKFEYILKDAIGRDWQCGTIQ-VDFNLPSRFNAFYVNSHSEKCHPVMIHRAVFGS 530
           GA +    E  +  A GR  Q  T   +  N    F   + +  + +     +++  +G 
Sbjct: 9   GADFTTTVEAYVP-ANGRAIQGATSHHLGQNFSKMFEIVFEHPDTGEKQ--YVYQNSWGL 65

Query: 531 IERFIGIMIENFKGN----LPLWLSPIQAIVTTITSSA----------VEYAQEIANLLK 576
             R IG+ +     N    LP  ++P Q ++     +            +    +   L+
Sbjct: 66  SSRSIGVAVMVHGDNSGLVLPPRVAPHQVVIVPCGITVNSPESEKKLLADKCATLEKELR 125

Query: 577 SHHLSIETDFR-NETINYKIREH 598
              + ++ D+R N +  +K    
Sbjct: 126 EAAIRVKGDYRENYSPGWKFNHW 148


>gi|260593112|ref|ZP_05858570.1| serine--tRNA ligase [Prevotella veroralis F0319]
 gi|260534912|gb|EEX17529.1| serine--tRNA ligase [Prevotella veroralis F0319]
          Length = 429

 Score = 58.6 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 36/245 (14%), Positives = 78/245 (31%), Gaps = 24/245 (9%)

Query: 210 GDSNRPMLSRIYGTAWNTQQELTQYLYFLEESEKRDHRKLAREMDLFHIAEDGSGVIFWH 269
            D+N  ++ +  GT  N   +   +   L++    D     +           +G   + 
Sbjct: 120 KDANDNVVVKEGGTKPNLPADAQCHWDLLKKFNLVDFDLGVKITG--------AGFPLYI 171

Query: 270 RKGWKIFQTLISY-MRRKIKDDYEEINTPQVLDQHLWQQSGHWDSYRANMFAVKCADDTI 328
            K  +  + L ++ +    K  Y E+  P V++Q                   K      
Sbjct: 172 GKMARFQRALEAFFLDEARKSGYLEVQPPLVVNQDS--------GLGTGQLPDKEGQMYH 223

Query: 329 KDLRTFALKPMNCPGHVAVFNHGLKSYRELPVRLAEFGSVYRNEP---SGSLHGLMRVRG 385
            +L    L P        +F   +   +ELP++   + + +R E       + GL R+  
Sbjct: 224 ANLDDLYLIPTAEVPVTNIFRDEILDEKELPIKRCAYSACFRREAGSYGKDVRGLNRLHQ 283

Query: 386 FTQDDAHVFCTKEQMFNECLKIHNLIISIYKDFGFEKIMVKLSTRPEKRV----GSDALW 441
           F + +       E  +    ++ N +  + K       +++L                +W
Sbjct: 284 FDKVEIVRIDKPEHSYESLDEMLNHVEGLLKKLELPYHILRLCGGDMSFTSAICYDFEVW 343

Query: 442 DDAEN 446
             A+ 
Sbjct: 344 SAAQE 348


>gi|223044100|ref|ZP_03614139.1| histidyl-tRNA synthetase [Staphylococcus capitis SK14]
 gi|222442494|gb|EEE48600.1| histidyl-tRNA synthetase [Staphylococcus capitis SK14]
          Length = 420

 Score = 58.6 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 19/87 (21%), Positives = 39/87 (44%)

Query: 557 VTTITSSAVEYAQEIANLLKSHHLSIETDFRNETINYKIREHSIKKIPIIIICGDKEASE 616
           + T+   A  YA ++ N L+ + +  + D+ N  I  ++++         I+ GD+E   
Sbjct: 334 IVTMGEEADRYAVKLLNDLRKNDVKADKDYLNRKIKGQMKQADRLNAKYTIVIGDQELEN 393

Query: 617 RSIGIRRFGSTTTQKVSLLDAIPILTK 643
            SI I+   +  ++ + L   I    K
Sbjct: 394 NSIAIKNMTTGESENIQLDQLINYFKK 420


  Database: nr
    Posted date:  May 22, 2011 12:22 AM
  Number of letters in database: 999,999,966
  Number of sequences in database:  2,987,313
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 22, 2011 12:30 AM
  Number of letters in database: 999,999,796
  Number of sequences in database:  2,903,041
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 22, 2011 12:36 AM
  Number of letters in database: 999,999,281
  Number of sequences in database:  2,904,016
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 22, 2011 12:41 AM
  Number of letters in database: 999,999,960
  Number of sequences in database:  2,935,328
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 22, 2011 12:46 AM
  Number of letters in database: 842,794,627
  Number of sequences in database:  2,394,679
  
Lambda     K      H
   0.310    0.125    0.332 

Lambda     K      H
   0.267   0.0382    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,809,518,164
Number of Sequences: 14124377
Number of extensions: 451394228
Number of successful extensions: 1305670
Number of sequences better than 10.0: 10000
Number of HSP's better than 10.0 without gapping: 14540
Number of HSP's successfully gapped in prelim test: 10258
Number of HSP's that attempted gapping in prelim test: 1227156
Number of HSP's gapped (non-prelim): 31512
length of query: 652
length of database: 4,842,793,630
effective HSP length: 146
effective length of query: 506
effective length of database: 2,780,634,588
effective search space: 1407001101528
effective search space used: 1407001101528
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.3 bits)
S2: 84 (37.1 bits)